BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780419|ref|YP_003064832.1| aspartyl-tRNA synthetase
[Candidatus Liberibacter asiaticus str. psy62]
         (622 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780419|ref|YP_003064832.1| aspartyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040096|gb|ACT56892.1| aspartyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 622

 Score = 1291 bits (3341), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/622 (100%), Positives = 622/622 (100%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE
Sbjct: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY
Sbjct: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF
Sbjct: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME
Sbjct: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH
Sbjct: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF
Sbjct: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI
Sbjct: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF
Sbjct: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA
Sbjct: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK
Sbjct: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600

Query: 601 ISVTTILRNVYGLKIIHSITLL 622
           ISVTTILRNVYGLKIIHSITLL
Sbjct: 601 ISVTTILRNVYGLKIIHSITLL 622


>gi|315122137|ref|YP_004062626.1| aspartyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495539|gb|ADR52138.1| aspartyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 598

 Score = 1072 bits (2772), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 508/596 (85%), Positives = 555/596 (93%), Gaps = 1/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTHSCGDL VSDVGSFVRLSGW+HRVRPHGGIIFLDIRDHYG+TQ+VANP+S+CF+
Sbjct: 1   MHRYRTHSCGDLRVSDVGSFVRLSGWIHRVRPHGGIIFLDIRDHYGLTQIVANPESSCFD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IAKSVRSEWV+CIDGLVMSR+AETIN+NI TG+IEL AQ IE+LSVAEELPLPVFGEREY
Sbjct: 61  IAKSVRSEWVVCIDGLVMSRTAETINSNIETGEIELYAQGIEVLSVAEELPLPVFGEREY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE+IRFKYRFLDLRRDTLHKNIVKR  II+SMR RMIAENFIE STPILTASSPEGARDF
Sbjct: 121 PENIRFKYRFLDLRRDTLHKNIVKRANIISSMRHRMIAENFIEYSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+LNTMENVLRG+FEEF+ G  VS NF RICYDDAIR+YGTDKPDLRNPIIM+
Sbjct: 241 MSFVEQEDVLNTMENVLRGLFEEFAEGYPVSQNFPRICYDDAIRKYGTDKPDLRNPIIMN 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NVTEHF  SEFRVFSK+LS NP YEVWAIPAK  GG RAFCDRMN WA+SQGQ GLAYIF
Sbjct: 301 NVTEHFACSEFRVFSKMLSSNPEYEVWAIPAK-KGGTRAFCDRMNAWAQSQGQVGLAYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WRLDE GNV G GPVAKHLNI +TE+IR  LDMQDGD+CFFIAG PLKFC+FAA+ARN+I
Sbjct: 360 WRLDEKGNVTGAGPVAKHLNIESTESIRAMLDMQDGDACFFIAGHPLKFCAFAANARNYI 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           AQELG+I+ N FE CWI+DFPFYEWNEEEKKI+FAHNPF+MPQGGM+SLKG++LLS+KAF
Sbjct: 420 AQELGMIDSNRFELCWIVDFPFYEWNEEEKKIEFAHNPFSMPQGGMKSLKGDNLLSVKAF 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASGGIRN+MS++M+QAFSNVGISKE VE+RFGGLYRAFQ GMPPHGG+A
Sbjct: 480 QYDLVCNGFEIASGGIRNYMSDIMIQAFSNVGISKEAVESRFGGLYRAFQYGMPPHGGMA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDRIVMLLL AK+VREVSLFPM+QNFCDLLMG+PS     QLRELGLRIVE PK
Sbjct: 540 AGIDRIVMLLLRAKSVREVSLFPMNQNFCDLLMGAPSPAISSQLRELGLRIVEKPK 595


>gi|13476902|ref|NP_108471.1| aspartyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|24212416|sp|Q983E9|SYD_RHILO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|14027663|dbj|BAB53932.1| aspartate-tRNA ligase [Mesorhizobium loti MAFF303099]
          Length = 596

 Score =  876 bits (2264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/596 (67%), Positives = 487/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VRLSGWVHRVR HGG++F+D+RDHYG+TQ+VA+PDS  F+
Sbjct: 1   MHRYRSHTCAQLRKSDVGSSVRLSGWVHRVRDHGGLLFIDLRDHYGLTQIVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R +ET+NAN+ TG+IE+ A++IE+LS A+ELPLPVFGE +Y
Sbjct: 61  VAETVRGEWVIRVDGEVKARLSETVNANLPTGEIEIFAREIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRRDTLHKNIV RT+II  MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRDTLHKNIVARTKIIAEMRKRMGDVGFTEFSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLIMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD+LNTME VLRGVFE F+NG  V+  F RI YD A+R+YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQDDVLNTMEPVLRGVFETFANGKPVTQKFQRIPYDVAMRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F+VF+ IL+ +P  EVW IPAK  GG+RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 AVSDHFRDSGFKVFANILANDPKAEVWGIPAK-TGGSRAFCDRMNSWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    TEAIR +L + DGD+ FF+AGDP KF SFA  AR   
Sbjct: 360 WR-KEGDKLEGAGPLAKNIGEERTEAIRQQLGLADGDAAFFVAGDPKKFVSFAGAARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++   FE CWI+DFPF+EWNEEEKKIDFAHNPF+MPQGG+++L G DLL IKAF
Sbjct: 419 GEELNLVDRERFELCWIVDFPFFEWNEEEKKIDFAHNPFSMPQGGIDALNGEDLLGIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASGGIRNH+ E M++AF  VG+ +  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDMVCNGFEIASGGIRNHLPETMVKAFETVGLDRATVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDR+VMLL+GAKN+REV++FPM+Q   DLLM +PS  S +QLREL LR+    K
Sbjct: 539 AGIDRVVMLLVGAKNLREVTMFPMNQQAYDLLMNAPSEASPQQLRELALRVAPTKK 594


>gi|260466879|ref|ZP_05813063.1| aspartyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259029381|gb|EEW30673.1| aspartyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 598

 Score =  873 bits (2256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/596 (67%), Positives = 486/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VRLSGWVHRVR HGG++F+D+RDHYG+TQ+VA+PDS  F+
Sbjct: 3   MHRYRSHTCAQLRKSDVGSTVRLSGWVHRVRDHGGLLFIDLRDHYGLTQIVADPDSPAFK 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R  ET NAN+ TG+IE+ A++IE+LS A+ELPLPVFGE +Y
Sbjct: 63  VAETVRGEWVIRVDGEVKARLPETTNANLPTGEIEIFAREIEVLSAAKELPLPVFGEPDY 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRRDTLHKNIV RT+II  MR RM    F E STPILTASSPEGARDF
Sbjct: 123 PEDIRLKYRFLDLRRDTLHKNIVARTKIIAEMRKRMTDVGFTEFSTPILTASSPEGARDF 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 183 LVPSRIHPGTFYALPQAPQQYKQLIMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 242

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD+L+TME V+RGVFE F+NG  V+  F RI YD A+R+YG+DKPDLRNPI M 
Sbjct: 243 MSFVEQDDVLSTMEPVMRGVFETFANGKPVTQTFQRIPYDVAMRKYGSDKPDLRNPIEMQ 302

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F+VF+ IL+ +P  EVW IPAK  GG+RAFCDRMN WA+ +GQPGL YIF
Sbjct: 303 AVSDHFRDSGFKVFANILANDPKAEVWGIPAK-TGGSRAFCDRMNSWAQGEGQPGLGYIF 361

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    TEAIR++L + DGD+ FF+AGDP KF SFA  AR   
Sbjct: 362 WR-KEGDKLEGAGPLAKNIGEERTEAIRLQLGLADGDAAFFVAGDPKKFVSFAGAARTRA 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++   FE CWI+DFPF+EWNEEEKKIDFAHNPF+MPQGG+++L G DLL IKAF
Sbjct: 421 GEELNLVDRERFELCWIVDFPFFEWNEEEKKIDFAHNPFSMPQGGIDALNGEDLLGIKAF 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASGGIRNH+ E M++AF  VG+ +  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 481 QYDMVCNGFEIASGGIRNHLPETMVKAFETVGLDRATVEERFGGLYRAFQYGAPPHGGMA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AG+DR+VMLL+GAKN+RE+++FPM+Q   DLLM +PS  S +QLREL LR+    K
Sbjct: 541 AGVDRVVMLLVGAKNLREITMFPMNQQAYDLLMNAPSEASPQQLRELALRVAPTKK 596


>gi|319784194|ref|YP_004143670.1| aspartyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170082|gb|ADV13620.1| aspartyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 598

 Score =  868 bits (2243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/592 (67%), Positives = 486/592 (82%), Gaps = 2/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VRLSGWVHRVR HGG++F+D+RD+YG+TQ+VA+PDS  F+
Sbjct: 3   MHRYRSHTCAQLRKSDVGSTVRLSGWVHRVRDHGGLLFIDLRDNYGLTQIVADPDSPAFK 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R  ET NAN+ TG+IE+ A++IE+LS A+ELPLPVFGE +Y
Sbjct: 63  VAETVRGEWVIRVDGEVKARLPETTNANLPTGEIEIFAREIEVLSAAKELPLPVFGEPDY 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II  MR RM    F E STPILTASSPEGARDF
Sbjct: 123 PEDIRLKYRFLDLRRETLHKNIIARTKIIAEMRKRMGEVGFTEFSTPILTASSPEGARDF 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 183 LVPSRIHPGTFYALPQAPQQYKQLIMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 242

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD+L+TME V+RGVFE F+NG  V+ NF RI YD A+R+YG+DKPDLRNPI M 
Sbjct: 243 MSFVEQDDVLSTMEPVMRGVFETFANGKPVTQNFQRIPYDVAMRKYGSDKPDLRNPIEMQ 302

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F+VF+ IL+ +P  EVW IPAK  GG+RAFCDRMN WA+ +GQPGL YIF
Sbjct: 303 AVSDHFRDSGFKVFANILANDPKAEVWGIPAK-TGGSRAFCDRMNSWAQGEGQPGLGYIF 361

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    TEAIR++L + DGD+ FF+AGDP KF SFA  AR   
Sbjct: 362 WR-KEGDKLEGAGPLAKNIGEERTEAIRLQLGLADGDAAFFVAGDPKKFVSFAGAARTRA 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++   FE CWI+DFPF+EWNEEEKKIDFAHNPF+MPQGG+++L G DLL IKAF
Sbjct: 421 GEELNLVDRERFELCWIVDFPFFEWNEEEKKIDFAHNPFSMPQGGIDALNGEDLLGIKAF 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASGGIRNH+ E M++AF  VG+ +  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 481 QYDMVCNGFEIASGGIRNHLPETMVKAFETVGLDRATVEERFGGLYRAFQYGAPPHGGMA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AG+DR+VMLLLGAKN+RE+++FPM+Q   DLLM +PS  S +QLR+L LR+ 
Sbjct: 541 AGVDRVVMLLLGAKNLREITMFPMNQQAYDLLMNAPSEASPQQLRDLALRVA 592


>gi|15888491|ref|NP_354172.1| aspartyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|27923862|sp|Q8UG87|SYD_AGRT5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|15156191|gb|AAK86957.1| aspartyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 595

 Score =  862 bits (2226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/596 (67%), Positives = 489/596 (82%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVG  VRLSGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDVGETVRLSGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +RS +TIN  + TG+IEL AQ+IE+L VA+ELPLPVFGE EY
Sbjct: 61  VAETVRGEWVIRIDGLVKARSEDTINKGMATGEIELYAQEIEVLGVAKELPLPVFGEPEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLH+NIVKRT+II+SMR  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHRNIVKRTQIISSMRKGMGDLGFAEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+++G F+ALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHEGQFFALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+  TME ++  VFE+F+ G  V+  + RI YD++IR+YG+DKPDLRNPI+M 
Sbjct: 241 MSFVTQEDVWTTMEPMMTAVFEQFAEGKPVTKQWPRIPYDESIRKYGSDKPDLRNPIVME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  +VWAIPAK  GG+RAFCDRMN WA+SQGQPGL YIF
Sbjct: 301 AVTEHFDGSGFKVFANMIASNPKVQVWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W+ +E G VAG GP+AK++    TEA+R +L ++ GD+CFF+AGDP KF  FA +AR   
Sbjct: 360 WK-EEEGKVAGSGPLAKNIGEERTEALRQQLGLEAGDACFFVAGDPAKFYKFAGEARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ + FE CWI+DFPF+E+NEEEKKIDFAHNPF+MPQGGME+L+G D LSIKAF
Sbjct: 419 ADELNLIDRDRFEMCWIVDFPFFEYNEEEKKIDFAHNPFSMPQGGMEALEGQDPLSIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD VCNGFEIASG IRN   E+M++AF  VG+S+  VE RFGGLYRAFQ G PPHGG A
Sbjct: 479 QYDAVCNGFEIASGSIRNQSPELMVKAFEKVGLSQSDVEERFGGLYRAFQYGAPPHGGCA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIDR+VMLL+GAKN+RE++LFPM+Q   DLLM +PS  +  QLREL LR+V + K
Sbjct: 539 FGIDRVVMLLVGAKNLREITLFPMNQQAQDLLMNAPSPATPTQLRELALRVVPSKK 594


>gi|163759181|ref|ZP_02166267.1| aspartyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162283585|gb|EDQ33870.1| aspartyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 595

 Score =  860 bits (2223), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/592 (66%), Positives = 484/592 (81%), Gaps = 2/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SD G+ VRLSGWVHRVR HGG++F+D+RDHYG+TQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDTGANVRLSGWVHRVRDHGGVLFIDLRDHYGLTQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA++VR EWV+ IDG+V  R A+TIN N+ TG+IE+ AQ+IE+LS A+ELPLPVFGE +Y
Sbjct: 61  IAETVRGEWVIRIDGVVKERMADTINPNLGTGEIEVFAQEIEVLSSAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLHKNIV RT++I  MR RM    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHKNIVTRTKVIADMRKRMTDIGFAEYATPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGQFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ +TME V+RGVFEEF+ G  V+  F RI YD+A+R+YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEDVWDTMEPVMRGVFEEFAEGKPVTQEFRRIPYDEAVRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  EVWAIPAK  GG+RAFCDRMN WA+ QGQPGL YIF
Sbjct: 301 AVTEHFAGSGFKVFAGMIANNPKVEVWAIPAK-TGGSRAFCDRMNSWAQGQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    TEAIR+++ ++DGD+CFF AGDP KF  FA DAR   
Sbjct: 360 WR-KEGDTLEGAGPIAKNIGPERTEAIRLQMGLEDGDACFFAAGDPAKFARFAGDARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ N FE CWI+DFPFYEW+E+ KK++FAHNPF+MPQGGME+L+  D L++KA+
Sbjct: 419 GEELNLVDENRFELCWIVDFPFYEWDEDAKKVEFAHNPFSMPQGGMEALETQDPLTLKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN   E+M++AF  VG+S+  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGSIRNQSPELMVKAFEKVGLSQADVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AG+DR++ML++GAKN+REV+LFPM+Q   DLLMG+PS  +  Q+REL LR +
Sbjct: 539 AGVDRVIMLIVGAKNLREVALFPMNQQAQDLLMGAPSPAAPAQMRELSLRAI 590


>gi|227821517|ref|YP_002825487.1| aspartyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|254781746|sp|C3M9G8|SYD_RHISN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|227340516|gb|ACP24734.1| aspartyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 595

 Score =  860 bits (2222), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/596 (65%), Positives = 492/596 (82%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VRLSGWVHRVR HGG++F+D+RDHYG+TQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDVGSTVRLSGWVHRVRDHGGVLFIDLRDHYGMTQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDG V +R+ +T+N N+ TG+IEL A++IE+LS A+ELPLPVFGE +Y
Sbjct: 61  MAETVRGEWVIRIDGTVKARTDDTVNKNMPTGEIELYAREIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLH+NIVKRT +I++MR  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHRNIVKRTEVISAMRRGMSDIGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+ +TME ++R +F +F++G  V++ F RI YD AIR+YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVWDTMEPMIRAIFADFADGKPVTDKFPRIPYDTAIRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VT+HF  S F+VF+ +++ NP  E+WAIPAK  GG+RAFCDRMN WA+SQGQPGL YIF
Sbjct: 301 EVTQHFAGSGFKVFANMIATNPKVEIWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    T+AIR +L ++DGD+CFF+AG+P KF  FA +AR   
Sbjct: 360 WR-KEGEKLEGAGPLAKNIGEERTDAIRTQLGLEDGDACFFVAGEPAKFYKFAGEARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE CWI+DFPFYEWNE+EK++DFAHNPF+MPQGG+++L G+DLLSIKAF
Sbjct: 419 GEELNLVDRDRFELCWIVDFPFYEWNEDEKRVDFAHNPFSMPQGGLKALSGDDLLSIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASG IRN   E+M++AF NVG+S+  VE +FGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDMVCNGFEIASGSIRNQSPELMVKAFENVGLSQADVEEQFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIDRIVML++GAKN+RE+SLFPM+Q   DLLMG+PS  +  QLREL +R +   K
Sbjct: 539 FGIDRIVMLIVGAKNLREISLFPMNQQAVDLLMGAPSPATPAQLRELAIRPIPQKK 594


>gi|325292528|ref|YP_004278392.1| Aspartyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060381|gb|ADY64072.1| Aspartyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 627

 Score =  860 bits (2221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/596 (67%), Positives = 489/596 (82%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVG  VRLSGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 33  MHRYRSHTCAALRKSDVGETVRLSGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 92

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +RS +TIN  + TG+IEL AQ+IE+L VA+ELPLPVFGE EY
Sbjct: 93  VAETVRGEWVIRIDGLVKARSEDTINKGMATGEIELYAQEIEVLGVAKELPLPVFGEPEY 152

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLHKNIVKRT+II+SMR  M    F E +TPILTASSPEGARDF
Sbjct: 153 PEDVRLKYRFLDLRRETLHKNIVKRTQIISSMRKGMGDLGFAEYTTPILTASSPEGARDF 212

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+++G F+ALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 213 LVPSRIHEGQFFALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 272

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+  TME ++  VFE+F+ G  V+  + RI YD++IR+YG+DKPDLRNPI+M 
Sbjct: 273 MSFVTQEDVWTTMEPMMTAVFEQFAEGKPVTKEWPRIPYDESIRKYGSDKPDLRNPIVME 332

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  +VWAIPAK  GG+RAFCDRMN WA+SQGQPGL YIF
Sbjct: 333 AVTEHFDGSGFKVFANMIASNPKVQVWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 391

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W+ +E G VAG GP+AK++    TEA+R +L ++ GD+CFF+AGDP KF  FA +AR   
Sbjct: 392 WK-EEEGKVAGSGPLAKNIGEERTEALRQQLGLEAGDACFFVAGDPAKFYKFAGEARTRA 450

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ + FE CWI+DFPF+E+N+EEKKIDFAHNPF+MPQGGME+L+G D LSIKAF
Sbjct: 451 ADELNLIDRDRFEMCWIVDFPFFEYNDEEKKIDFAHNPFSMPQGGMEALEGQDPLSIKAF 510

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD VCNGFEIASG IRN   E+M++AF  VG+S+  VE RFGGLYRAFQ G PPHGG A
Sbjct: 511 QYDAVCNGFEIASGSIRNQSPELMVKAFEKVGLSQSDVEERFGGLYRAFQYGAPPHGGCA 570

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIDR+VMLL+GAKN+RE++LFPM+Q   DLLM +PS  +  QLREL LR+V + K
Sbjct: 571 FGIDRVVMLLVGAKNLREITLFPMNQQAQDLLMNAPSPATPTQLRELALRVVPSKK 626


>gi|121602128|ref|YP_989155.1| aspartyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|166225321|sp|A1UT52|SYD_BARBK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|120614305|gb|ABM44906.1| aspartyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 596

 Score =  859 bits (2219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/591 (67%), Positives = 486/591 (82%), Gaps = 2/591 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L   DVG+ VRLSGWVHRVR HGGI+F+D+RDH+GITQ+V NPDS+ F+
Sbjct: 1   MHRYRSHNCAALRKCDVGTQVRLSGWVHRVRDHGGILFVDLRDHFGITQIVVNPDSSAFQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + VRSEWV+C+DG V +RS E IN  + TG+IE+ A +IEILS ++ELPLPVFGE +Y
Sbjct: 61  IMEKVRSEWVICVDGKVCARSDEVINTTLPTGEIEIFADEIEILSKSDELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR T+HKNI++RT II+S+R  M    F E +TP+LTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRVTMHKNIMRRTEIISSIRRHMQDSGFTEFTTPLLTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+L TME ++R VFEEFS+G  V+ +F RI YD+A+R+YG+DKPDLRNPII+ 
Sbjct: 241 MSFVEQEDVLATMEPIIRSVFEEFSDGKLVTQSFPRISYDEAMRKYGSDKPDLRNPIIIE 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF  S+F+VF++IL+ N   +VWAIPAK  GGNRAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 DVSQHFYDSDFKVFAQILANNENAQVWAIPAK-TGGNRAFCDRMNGWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E  N  G GP+AK++    TEAIR +L +++GD+CFF+AGDP KF SFA  +R  I
Sbjct: 360 WR-KEGENFEGAGPIAKNIGEQRTEAIRTQLGLKEGDACFFVAGDPKKFASFAGASRTRI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+  CF F WI+DFPF+EWNE+EKKIDFAHNPF+MPQGGM ++   D L+IKAF
Sbjct: 419 GEELDLIDSKCFSFAWIVDFPFFEWNEDEKKIDFAHNPFSMPQGGMNAVDSQDPLTIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG+EIASGGIRNH  E+ML+ F+  G+S+E+VE RFGGLYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKVFNLAGLSREIVEERFGGLYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G KN+RE+SLFPM+Q   DLLM +PS VS  QL +LG+RI
Sbjct: 539 AGVDRIVMLLQGVKNLREISLFPMNQQALDLLMSAPSDVSATQLNDLGIRI 589


>gi|307317752|ref|ZP_07597190.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306896514|gb|EFN27262.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti AK83]
          Length = 595

 Score =  858 bits (2217), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/596 (65%), Positives = 487/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VRLSGWVHRVR HGG++F+D+RDHYG+TQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDVGSTVRLSGWVHRVRDHGGVLFIDLRDHYGMTQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VR EWV+ +DG V +R+ +T+N N+ TG++EL A++IE+LS A+ELPLPVFGE +Y
Sbjct: 61  TAETVRGEWVIRVDGAVKARTDDTVNKNMPTGEVELYAREIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLHKNIV+RT II +MR RM    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHKNIVRRTEIIAAMRRRMGDIGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGNFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+ + ME ++R +F +F+ G  V++ F RI YD AIR+YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVWDAMEPMIRAIFSDFAGGKPVTDKFPRIPYDTAIRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  E+WAIPAK  GG+RAFCDRMN WA+SQGQPGL YIF
Sbjct: 301 EVTEHFAGSGFKVFANMIASNPKVEIWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    T+AIR +L ++DGD+CFF+AG+P KF  FA +AR   
Sbjct: 360 WR-KEGEKLEGAGPLAKNIGEERTDAIRTQLGLEDGDACFFVAGEPAKFYKFAGEARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + +E CWI+DFPFYEWNEEEK++DFAHNPF+MPQGG+ +L  +DLLSIKAF
Sbjct: 419 GEELNLVDRDRYELCWIVDFPFYEWNEEEKRVDFAHNPFSMPQGGLSALSSDDLLSIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASG IRN   E+M++AF NVG+S+  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDMVCNGFEIASGSIRNQSPELMVKAFENVGLSQADVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIDRIVMLL+GAKN+RE+SLFPM+Q   DLLMG+PS  +  QLREL +R +   K
Sbjct: 539 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPSQATPAQLRELSIRPIPQKK 594


>gi|15964947|ref|NP_385300.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307301018|ref|ZP_07580787.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|24212413|sp|Q92QV4|SYD_RHIME RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|15074126|emb|CAC45773.1| Probable aspartyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306903973|gb|EFN34559.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 595

 Score =  858 bits (2216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/596 (65%), Positives = 487/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VRLSGWVHRVR HGG++F+D+RDHYG+TQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDVGSTVRLSGWVHRVRDHGGVLFIDLRDHYGMTQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VR EWV+ +DG V +R+ +T+N N+ TG++EL A++IE+LS A+ELPLPVFGE +Y
Sbjct: 61  TAETVRGEWVIRVDGAVKARTDDTVNKNMPTGEVELYAREIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLHKNIV+RT II +MR RM    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHKNIVRRTEIIAAMRRRMGDIGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGNFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+ + ME ++R +F +F+ G  V++ F RI YD AIR+YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVWDAMEPMIRAIFSDFAGGKPVTDKFPRIPYDTAIRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  E+WAIPAK  GG+RAFCDRMN WA+SQGQPGL YIF
Sbjct: 301 EVTEHFAGSGFKVFANMIASNPKVEIWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    T+AIR +L ++DGD+CFF+AG+P KF  FA +AR   
Sbjct: 360 WR-KEGEKLEGAGPLAKNIGEERTDAIRTQLGLEDGDACFFVAGEPAKFYKFAGEARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + +E CWI+DFPFYEWNEEEK++DFAHNPF+MPQGG+ +L  +DLLSIKAF
Sbjct: 419 GEELNLVDRDRYELCWIVDFPFYEWNEEEKRVDFAHNPFSMPQGGLTALSSDDLLSIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASG IRN   E+M++AF NVG+S+  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDMVCNGFEIASGSIRNQSPELMVKAFENVGLSQADVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIDRIVMLL+GAKN+RE+SLFPM+Q   DLLMG+PS  +  QLREL +R +   K
Sbjct: 539 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPSQATPAQLRELSIRPIPQKK 594


>gi|222085492|ref|YP_002544022.1| aspartyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|254781708|sp|B9JCV9|SYD_AGRRK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|221722940|gb|ACM26096.1| aspartyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 596

 Score =  857 bits (2214), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/597 (66%), Positives = 482/597 (80%), Gaps = 2/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +R+ +T+N  + TG+IEL AQ+IE+LS A+ELPLP+FGE +Y
Sbjct: 61  LAETVRGEWVIRIDGLVKARTEDTVNKTMPTGEIELYAQEIEVLSAAKELPLPIFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRRDTLHKNIVKRT++I+SMR  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRDTLHKNIVKRTQVISSMRRHMGEVGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ NTM  ++  +FEEF+ G  V+  + RI YD AIR+YG+DKPDLRNPI+M 
Sbjct: 241 MSFVTQEDVWNTMAPLMTSIFEEFAEGKPVTKEWPRIPYDVAIRKYGSDKPDLRNPIVME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  EVWAIPAK  GG+RAFCDRMN WA+SQGQPGL YIF
Sbjct: 301 AVTEHFAGSGFKVFANMIASNPKVEVWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    T+AIR +L + DGD+CFF+AGDP KF  FA +AR   
Sbjct: 360 WR-KEGEKLEGAGPLAKNIGEERTDAIRTQLGLDDGDACFFVAGDPAKFYKFAGEARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             EL +I+ + FE CWI+DFPF+EW+EEEKK+DFAHNPF+MPQGG+E+L+  D L+IKA+
Sbjct: 419 GDELNLIDRDRFELCWIVDFPFFEWSEEEKKVDFAHNPFSMPQGGLEALQNQDPLTIKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD VCNGFEIASG IRN   E M+ AF  VG+S+  VE RFGGLYRAFQ G PPHGG A
Sbjct: 479 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQADVEERFGGLYRAFQYGAPPHGGAA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRIVMLL+GAKN+RE+SLFPM+Q   DLLMG+PS  +  QLREL +R V   KK
Sbjct: 539 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPSVATPTQLRELAIRPVPPVKK 595


>gi|86357135|ref|YP_469027.1| aspartyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86281237|gb|ABC90300.1| aspartyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 602

 Score =  857 bits (2213), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/597 (65%), Positives = 488/597 (81%), Gaps = 2/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VR++GWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 7   MHRYRSHTCAALRKTDVGSTVRIAGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 66

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +R+ +T+N  + TG+IEL AQ+IE+LS A+ELPLPVFGE EY
Sbjct: 67  MAETVRGEWVIRIDGLVKARTEDTVNKTMATGEIELYAQEIEVLSAAKELPLPVFGEPEY 126

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLHKNIVKRT++I++MR  M +  F E +TPILTASSPEGARDF
Sbjct: 127 PEDVRLKYRFLDLRRETLHKNIVKRTQVISAMRREMGSAGFTEYTTPILTASSPEGARDF 186

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 187 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ NTM  ++  VFEEF+ G  V+  + RI YD+AIR+YG+DKPDLRNPI+M 
Sbjct: 247 MSFVTQEDVWNTMGPLMTKVFEEFAEGKPVTKEWPRIPYDEAIRKYGSDKPDLRNPIVME 306

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  +VWAIPAK  GG+RAFCDRMN WA+SQGQPGL YIF
Sbjct: 307 AVTEHFAGSGFKVFAGMIASNPKVQVWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 365

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    T+AIR +L + DGD+CFF+AG+P KF  FA +AR   
Sbjct: 366 WR-KEGDKLEGAGPLAKNIGEERTDAIRTQLGLDDGDACFFVAGEPEKFYKFAGEARTKA 424

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE CWI+DFPF+EWN+EEKK+DFAHNPF+MPQGG+++L+  D L+IKAF
Sbjct: 425 GEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQGGLDALQNQDPLTIKAF 484

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD VCNGFEIASG IRN   E M+ AF  VG+S++ VE+RFGGLYRAFQ G PPHGG A
Sbjct: 485 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGLYRAFQYGAPPHGGAA 544

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRI+MLL+GAKN+RE+SLFPM+Q   DLLMG+PS  ++ QLREL +R +   KK
Sbjct: 545 FGIDRIIMLLVGAKNLREISLFPMNQQAQDLLMGAPSPATLTQLRELAIRPIPPVKK 601


>gi|150396026|ref|YP_001326493.1| aspartyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166225432|sp|A6U7M8|SYD_SINMW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150027541|gb|ABR59658.1| aspartyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 595

 Score =  856 bits (2211), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/596 (65%), Positives = 484/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VRLSGWVHRVR HGG++F+D+RDHYG+TQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDVGSTVRLSGWVHRVRDHGGVLFIDLRDHYGMTQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VR EWV+ +DG V +R+ ET+N N+ TG++EL A++IE+LS A+ELPLPVFGE +Y
Sbjct: 61  AAETVRGEWVIRVDGAVKARTDETVNRNMPTGEVELYAREIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLHKNIV+RT II +MR RM    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHKNIVRRTEIIAAMRRRMSDIGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGNFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+ + ME ++R +F +F+ G  V++ F RI YD AIR+YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVWDAMEPMIRAIFADFAGGKPVTDKFPRIPYDAAIRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  E+WAIPAK  GG+RAFCDRMN WA+SQGQPGL YIF
Sbjct: 301 EVTEHFAGSGFKVFANMIASNPKVEIWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    T+AIR +L + DGD+CFF+AG+P KF  FA +AR   
Sbjct: 360 WR-KEGEKLEGAGPLAKNIGEERTDAIRTQLGLGDGDACFFVAGEPAKFYKFAGEARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++   +E CWI+DFPFYEWNEEEK++DFAHNPF+MPQGG+ +L  +DLLSIKAF
Sbjct: 419 GEELNLVDRERYELCWIVDFPFYEWNEEEKRVDFAHNPFSMPQGGLTALSSDDLLSIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASG IRN   E+M++AF NVG+S+  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDMVCNGFEIASGSIRNQSPELMVKAFENVGLSQADVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIDRIVMLL+GAKN+RE+SLFPM+Q   DLLMG+PS     QLREL +R V   K
Sbjct: 539 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPSPAEPAQLRELAIRPVPQKK 594


>gi|327194285|gb|EGE61148.1| aspartyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 596

 Score =  855 bits (2209), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/597 (65%), Positives = 488/597 (81%), Gaps = 2/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +R+ +T+N  + TG+IEL AQ+IE+LS A+ELPLPVFGE +Y
Sbjct: 61  LAETVRGEWVIRIDGLVKARTEDTVNKTMATGEIELYAQEIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLH+NIVKRT++I++MR  M A  F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHRNIVKRTQVISAMRREMGAVGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ NTM  ++  VFEEF++G  V+  + RI YD+AIR+YG+DKPDLRNPI+M 
Sbjct: 241 MSFVTQEDVWNTMGPLMTSVFEEFADGKPVTKEWPRIPYDEAIRKYGSDKPDLRNPIVME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  ++WAIPAK  GG+RAFCDRMN WA+SQGQPGL YIF
Sbjct: 301 AVTEHFAGSGFKVFAGMIASNPKVQIWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E+  + G GP+AK++    TEAIR +L + DGD+CFF+AG+P KF  FA +AR   
Sbjct: 360 WR-SENDKLEGAGPLAKNIGEERTEAIRTQLGLGDGDACFFVAGEPEKFYKFAGEARTKA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE CWI+DFPF+EWN+EEKK+DFAHNPF+MPQGG+ +L+  D L+IKAF
Sbjct: 419 GEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQGGLAALQNQDPLTIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD VCNGFEIASG IRN   E M+ AF  VG+S++ VE+RFGGLYRAFQ G PPHGG A
Sbjct: 479 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGLYRAFQYGAPPHGGAA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRIVMLL+GAKN+RE+SLFPM+Q   DLLMG+P+  +  QLREL +R +   KK
Sbjct: 539 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPTPATPTQLRELSIRPIPPVKK 595


>gi|190891179|ref|YP_001977721.1| aspartyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|190696458|gb|ACE90543.1| aspartyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 602

 Score =  854 bits (2207), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/597 (65%), Positives = 488/597 (81%), Gaps = 2/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 7   MHRYRSHTCAALRKTDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 66

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +R+ +T+N  + TG+IEL AQ+IE+LS A+ELPLPVFGE +Y
Sbjct: 67  LAETVRGEWVIRIDGLVKARTEDTVNKTMATGEIELYAQEIEVLSAAKELPLPVFGEPDY 126

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLH+NIVKRT++I++MR  M A  F E +TPILTASSPEGARDF
Sbjct: 127 PEDVRLKYRFLDLRRETLHRNIVKRTQVISAMRREMGAVGFTEYTTPILTASSPEGARDF 186

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 187 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ NTM  ++  VFEEF++G  V+  + RI YD+AIR+YG+DKPDLRNPI+M 
Sbjct: 247 MSFVTQEDVWNTMGPLMTSVFEEFADGKPVTKEWPRIPYDEAIRKYGSDKPDLRNPIVME 306

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  ++WAIPAK  GG+RAFCDRMN WA+SQGQPGL YIF
Sbjct: 307 AVTEHFAGSGFKVFAGMIASNPKVQIWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 365

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E+  + G GP+AK++    TEAIR +L + DGD+CFF+AG+P KF  FA +AR   
Sbjct: 366 WR-SENDKLEGAGPLAKNIGEERTEAIRTQLGLGDGDACFFVAGEPEKFYKFAGEARTKA 424

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE CWI+DFPF+EWN+EEKK+DFAHNPF+MPQGG+++L   D L+IKAF
Sbjct: 425 GEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQGGLDALTNQDPLTIKAF 484

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD VCNGFEIASG IRN   E M+ AF  VG+S++ VE+RFGGLYRAFQ G PPHGG A
Sbjct: 485 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGLYRAFQYGAPPHGGAA 544

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRIVMLL+GAKN+RE+SLFPM+Q   DLLMG+P+  +  QLREL +R +   KK
Sbjct: 545 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPTPATPTQLRELSIRPIPPVKK 601


>gi|241203986|ref|YP_002975082.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857876|gb|ACS55543.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 596

 Score =  853 bits (2205), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/597 (65%), Positives = 485/597 (81%), Gaps = 2/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +R+ +T+N  + TG+IEL AQ+IE+LS A+ELPLP+FGE +Y
Sbjct: 61  MAETVRGEWVIRIDGLVKARTEDTVNKTMATGEIELYAQEIEVLSAAKELPLPIFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLHKNIVKRT++I++MR  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHKNIVKRTQVISAMRREMGNVGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ +TM  ++ G+FEEF+ G  V+  + RI YD AIR+YG+DKPDLRNPI+M 
Sbjct: 241 MSFVTQEDVWDTMGPLMTGIFEEFAEGKPVTKEWPRIPYDVAIRKYGSDKPDLRNPIVME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  E+WAIPAK  GG+RAFCDRMN WA+S GQPGL YIF
Sbjct: 301 AVTEHFAGSGFKVFAGMIASNPKVEIWAIPAK-TGGSRAFCDRMNAWAQSTGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    T+AIR +L + DGD+CFF+AGDP KF  FA +AR   
Sbjct: 360 WR-KEGDKLEGAGPLAKNIGEERTDAIRTQLGLDDGDACFFVAGDPAKFYKFAGEARTKA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE CWI+DFPF+EW+EEEKK+DFAHNPF+MPQGG+E+L+  D L+IKAF
Sbjct: 419 GEELNLVDRDRFELCWIVDFPFFEWSEEEKKVDFAHNPFSMPQGGLEALQSQDPLTIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD VCNGFEIASG IRN   E M+ AF  VG+S++ VE+RFGGLYRAFQ G PPHGG A
Sbjct: 479 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGLYRAFQYGAPPHGGAA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRI+MLL+GAKN+RE+SLFPM+Q   DLLMG+PS  +  QLREL +R +   KK
Sbjct: 539 FGIDRIIMLLVGAKNLREISLFPMNQQAQDLLMGAPSPATPTQLRELSIRPIPPVKK 595


>gi|116251371|ref|YP_767209.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|123081980|sp|Q1MIW0|SYD_RHIL3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|115256019|emb|CAK07100.1| putative aspartyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 596

 Score =  852 bits (2202), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/597 (65%), Positives = 485/597 (81%), Gaps = 2/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +R+ +T+N  + TG+IEL AQ+IE+LS A+ELPLPVFGE +Y
Sbjct: 61  MAETVRGEWVIRIDGLVKARTEDTVNKTMATGEIELYAQEIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLH+NIVKRT++I++MR  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHRNIVKRTQVISAMRREMGNVGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ NTM  ++  +FEEF+ G  V+  + RI YD+AIR+YG+DKPDLRNPI+M 
Sbjct: 241 MSFVTQEDVWNTMGPLMTSIFEEFAEGKPVTKEWPRIPYDEAIRKYGSDKPDLRNPIVMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  E+WAIPAK  GG+RAFCDRMN WA+S GQPGL YIF
Sbjct: 301 AVTEHFAGSGFKVFAGMIASNPKVEIWAIPAK-TGGSRAFCDRMNAWAQSTGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    T+AIR +L + DGD+CFF+AGDP KF  FA +AR   
Sbjct: 360 WR-KEGDKLEGAGPLAKNIGEERTDAIRTQLGLDDGDACFFVAGDPAKFYKFAGEARTKA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE CWI+DFPF+EW+EE+KK+DFAHNPF+MPQGG+++L+  D L+IKAF
Sbjct: 419 GEELNLVDRDRFELCWIVDFPFFEWSEEDKKVDFAHNPFSMPQGGLDALQNQDPLTIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD VCNGFEIASG IRN   E M+ AF  VG+S++ VE+RFGGLYRAFQ G PPHGG A
Sbjct: 479 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGLYRAFQYGAPPHGGAA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRIVMLL+GAKN+RE+SLFPM+Q   DLLMG+PS  +  QLREL +R +   KK
Sbjct: 539 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPSPAAPTQLRELSIRPIPPVKK 595


>gi|163868506|ref|YP_001609715.1| aspartyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|189082086|sp|A9IVI2|SYD_BART1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|161018162|emb|CAK01720.1| Aspartyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 597

 Score =  850 bits (2197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/596 (65%), Positives = 488/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H C  L   DVG+ VRLSGWVHRVR HGGI+F+D+RDH+GITQ+VA+P S  F+
Sbjct: 1   MHRYRSHHCAALRKCDVGTKVRLSGWVHRVRDHGGILFVDLRDHFGITQIVADPASPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + VRSEWV+ +DG V +RS E INA + TG+IE+  Q++EILS +EELPLPVFGE +Y
Sbjct: 61  VIEKVRSEWVIRVDGEVCARSDEVINATLPTGEIEIFVQEVEILSKSEELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+T+HKNI++RT II +MR  M    F E STP+LTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTEIIAAMRRAMQNNGFTEFSTPLLTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRVHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+L TME ++R +FEEF+NG TV+ NF RI YD+AI++YG+DKPDLRNPIIM 
Sbjct: 241 MSFVEQEDVLATMEPIMRSIFEEFANGKTVTQNFPRISYDEAIQKYGSDKPDLRNPIIME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF +S F+VF++IL+ +   +VWAIPAK  GG+RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 DVSQHFYNSGFKVFAQILADDENAQVWAIPAK-TGGSRAFCDRMNVWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E     G GP+AK++    TEA+R++L +++GD+CFF+AGDP KF SFA  AR  +
Sbjct: 360 WRKEEE-KFEGAGPIAKNIGEQRTEALRIQLGLENGDACFFVAGDPKKFASFAGAARTRV 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++  CF   WI+DFPF+EWNE+EKKIDFAHNPF+MPQGG  +L+  D L++KAF
Sbjct: 419 GEELDLVDRECFSLAWIVDFPFFEWNEDEKKIDFAHNPFSMPQGGENALECQDPLTLKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG+EIASGGIRNH+ E+ML+ F  VG+SK+VV++RFG LYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGYEIASGGIRNHLPEMMLKVFELVGLSKKVVKDRFGALYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDRI+MLL G KN+REV+LFPM+Q   DLLM +PS VS  QLR+LG+R+    K
Sbjct: 539 AGIDRIIMLLQGVKNLREVALFPMNQQALDLLMNAPSDVSSTQLRDLGIRMAPTQK 594


>gi|110633475|ref|YP_673683.1| aspartyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|123162516|sp|Q11JA7|SYD_MESSB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110284459|gb|ABG62518.1| aspartyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 594

 Score =  850 bits (2197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/597 (65%), Positives = 484/597 (81%), Gaps = 4/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C +L  SDVG  VRLSGWVHRVR HGG++F+D+RDHYGITQ+VA+PDS  F 
Sbjct: 1   MHRYRSHTCEELRPSDVGGTVRLSGWVHRVRDHGGLLFIDLRDHYGITQIVADPDSPSFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSEWV+ +DG V +R+ ET+N N+ TG +E+ A++IE+LS A+ELPLPVFGE +Y
Sbjct: 61  TAEKLRSEWVIRVDGEVKARTPETVNPNLATGGVEVFAREIEVLSQAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLH+NI+ RT+II  MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHRNILARTKIIAEMRKRMAESGFTEFSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQAPQ YKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRLHQGKFYALPQAPQIYKQLIMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ +TME V+RG+FE F+ G  V+    RI YD+A+R+YG+DKPDLRNPI+M 
Sbjct: 241 MSFVTQEDVFSTMEPVMRGIFEAFAEGKPVTQKLPRIPYDEAMRKYGSDKPDLRNPIVME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F+VF+ IL+ +P  EVWAIPAK  GG+RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 EVSEHFRGSGFKVFANILANDPKAEVWAIPAK-TGGSRAFCDRMNSWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    T+AIR +L + DGD+CFF+AGDP KF +FA  AR   
Sbjct: 360 WR-KEGDTLEGAGPIAKNIGPERTDAIRTQLGLGDGDACFFVAGDPKKFVAFAGAARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEWNE+EK+I+F HNPF+MPQGGME+L+  + LSIKAF
Sbjct: 419 GEELNLVDRDRFELAWIVDFPFYEWNEDEKRIEFGHNPFSMPQGGMEALENQEPLSIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASGGIRNHM E+M++AF   G  +++VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGGIRNHMPELMVKAFEVAGFDRQMVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           AGIDRIVMLL GAKN+RE+++FPM+Q   DLLMG+PS  + +QLREL +R+   PK+
Sbjct: 539 AGIDRIVMLLRGAKNLREITMFPMNQQAMDLLMGAPSEATPQQLRELHIRLA--PKQ 593


>gi|222148190|ref|YP_002549147.1| aspartyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|254781709|sp|B9JV61|SYD_AGRVS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|221735178|gb|ACM36141.1| aspartyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 601

 Score =  850 bits (2196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/601 (65%), Positives = 482/601 (80%), Gaps = 5/601 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVG+ VRLSGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDVGATVRLSGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDG+V +R+ ET+N  + TG+IEL AQ+IEIL+VA+ELPLPVFGE +Y
Sbjct: 61  LAETVRGEWVIRIDGVVKARADETVNKAMQTGEIELYAQEIEILAVAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRF+DLRR+TLHKNIVKRT+II+SMR  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFIDLRRETLHKNIVKRTQIISSMRNGMSELGFAEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+++G F+ALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHEGQFFALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+  TME ++  VFE+F+ G  V+  + RI YD+AIR+YG+DKPDLRNPI+M 
Sbjct: 241 MSFVTQEDVWTTMEPMMTKVFEQFAEGKPVTKQWPRIPYDEAIRKYGSDKPDLRNPIVMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK----GGGGNRAFCDRMNEWARSQGQPGL 356
            VTEHF  S F++F+ +++ NP  EVWAIP K     G   RA CDRMN WA+S GQPGL
Sbjct: 301 AVTEHFADSGFKIFASMIAANPKVEVWAIPVKHTEATGAIGRAVCDRMNAWAQSTGQPGL 360

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            YIFW+ +E G VAG GP+AK++    T AI  +L +  GD+CFF+AGDP KF  FA +A
Sbjct: 361 GYIFWK-EEDGKVAGSGPLAKNIGEERTAAIAAQLGLGAGDACFFVAGDPAKFYKFAGEA 419

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R    +EL +I+ + FE CWI+DFPFYEW+EEEKKIDFAHNPF+MPQGG+E+    D L+
Sbjct: 420 RTRAGEELNLIDRDRFEMCWIVDFPFYEWSEEEKKIDFAHNPFSMPQGGLEAFDSQDPLT 479

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +KA+QYD VCNGFEIASG IRN   E+M++AF  VG+S+  VE RFGGLYRAFQ G PPH
Sbjct: 480 LKAYQYDAVCNGFEIASGSIRNQSPELMVKAFEKVGLSQTDVEERFGGLYRAFQYGAPPH 539

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG A GIDR+VMLL+GAKN+RE+SLFPM+Q   DLLMG+P+  +  QLREL LR+V  PK
Sbjct: 540 GGCAFGIDRVVMLLVGAKNLREISLFPMNQQAQDLLMGAPAPATPTQLRELALRVVPTPK 599

Query: 597 K 597
           K
Sbjct: 600 K 600


>gi|153009868|ref|YP_001371083.1| aspartyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|166225369|sp|A6X200|SYD_OCHA4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|151561756|gb|ABS15254.1| aspartyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 595

 Score =  850 bits (2196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/592 (65%), Positives = 484/592 (81%), Gaps = 2/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+L+ A+ELPLPVFGE +Y
Sbjct: 61  VAETVRGEWVIRVDGEVKARAGDAVNTNLPTGEVEIFATEIEVLAAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM    F E +TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+++G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHEGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+++  TME V+RG+FEEF+ G  V+  F RI YDDAIR YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTQQFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ +P  EVWAIPAK  GG+RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 AVTEHFAGSGFKVFANMIANDPKVEVWAIPAK-TGGSRAFCDRMNSWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    TEAIR ++ ++DGD+CFF+AG P KF  FA DAR   
Sbjct: 360 WR-KEGDKLEGAGPIAKNIGEERTEAIRTQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+ KK+DFAHNPF+MPQGGM++L+  D L+IKA+
Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKLDFAHNPFSMPQGGMDALENQDPLAIKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN + +VM++AF  VG+S++ VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGSIRNQLPDVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDR++MLL+GAKN+RE+SLFPM+Q   DLLM +PS VS  QLR+L +R+ 
Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMNAPSDVSPAQLRDLHIRLA 590


>gi|240850738|ref|YP_002972138.1| aspartyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267861|gb|ACS51449.1| aspartyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 597

 Score =  850 bits (2196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/596 (65%), Positives = 488/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H C  L   DVG  VRLSGWVHRVR HGGI+F+D+RDH+GITQ+VA+P S  F+
Sbjct: 1   MHRYRSHHCAALRRCDVGEQVRLSGWVHRVRDHGGILFVDLRDHFGITQIVADPASPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + VRSEWV+ +DG V +RS E INA + TG+IE+ AQ++EILS ++ELPLPVFGE +Y
Sbjct: 61  VIEKVRSEWVIRVDGEVCARSDEVINATLPTGEIEIVAQEVEILSKSDELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+T+HKNI++RT II +MR  M    F E +TP+LTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTEIIAAMRRAMQNNGFTEFTTPLLTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRVHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+L TME ++R +FEEF++G TV+ +F RI YD+A+++YG+DKPDLRNPIIM 
Sbjct: 241 MSFVEQEDVLATMEPIMRSIFEEFADGKTVTQSFPRISYDEAMQKYGSDKPDLRNPIIME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF +S F+VFS+IL+ +   +VWAIPAK  GG+RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 DVSQHFYNSGFKVFSQILANDENAQVWAIPAK-TGGSRAFCDRMNVWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E GN  G GP+AK++     EA+R++L ++ GD+CFF+AGDP KF SFA  AR  +
Sbjct: 360 WR-EEKGNFEGAGPIAKNIGQQRAEALRIQLGLESGDACFFVAGDPKKFASFAGAARTRV 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++   F   WI+DFPF+EWNE+EKKIDFAHNPF+MPQGG  +L+  D L++KAF
Sbjct: 419 GEELDLLDRESFSLAWIVDFPFFEWNEDEKKIDFAHNPFSMPQGGENALETQDPLTLKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG+EIASGGIRNH+ E+ML+ F  VG+SKEVV++RFGGLYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGYEIASGGIRNHLPEMMLKVFELVGLSKEVVKDRFGGLYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDRI+MLL G KN+REV+LFPM+Q   DLLM +PS VS  QLR+LG+R+    K
Sbjct: 539 AGIDRIIMLLQGVKNLREVALFPMNQQALDLLMSAPSDVSPTQLRDLGIRMAPTHK 594


>gi|209548707|ref|YP_002280624.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|238064671|sp|B5ZX21|SYD_RHILW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|209534463|gb|ACI54398.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 596

 Score =  848 bits (2190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/597 (64%), Positives = 487/597 (81%), Gaps = 2/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +R+ +T+N  + TG+IEL AQ+IE+LS A+ELPLPVFGE +Y
Sbjct: 61  MAETVRGEWVIRIDGLVKARTEDTVNKAMATGEIELYAQEIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLHKNIVKRT++I++MR  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHKNIVKRTQVISAMRREMGNVGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ +TM  ++  VFEEF+ G  V+  + RI YD+AIR+YG+DKPDLRNPI+M 
Sbjct: 241 MSFVTQEDVWDTMGPLMTSVFEEFAEGKPVTKEWPRIPYDEAIRKYGSDKPDLRNPIVME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  ++WAIPAK  GG+RAFCDRMN WA+SQGQPGL YIF
Sbjct: 301 AVTEHFAGSGFKVFAGMIASNPKVQIWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E+  + G GP+AK++    T+AIR +L + DGD+CFF+AG+P KF  FA +AR   
Sbjct: 360 WR-SENDKLEGAGPLAKNIGEERTDAIRTQLGLGDGDACFFVAGEPEKFYKFAGEARTKA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE CWI+DFPF+EW+EE+KK+DFAHNPF+MPQGG+++L+  D L+IKAF
Sbjct: 419 GEELNLVDRDRFELCWIVDFPFFEWSEEDKKVDFAHNPFSMPQGGLDALQNQDPLTIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD VCNGFEIASG IRN   E M+ AF  VG+S++ VE+RFGGLYRAFQ G PPHGG A
Sbjct: 479 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGLYRAFQYGAPPHGGAA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRIVMLL+GAKN+RE+S+FPM+Q   DLLMG+PS  +  QLREL +R +   KK
Sbjct: 539 FGIDRIVMLLVGAKNLREISVFPMNQQAQDLLMGAPSPATPTQLRELSIRPIPPVKK 595


>gi|254718870|ref|ZP_05180681.1| aspartyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265983855|ref|ZP_06096590.1| aspartyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306837627|ref|ZP_07470497.1| aspartyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|306842000|ref|ZP_07474674.1| aspartyl-tRNA synthetase [Brucella sp. BO2]
 gi|264662447|gb|EEZ32708.1| aspartyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306287928|gb|EFM59345.1| aspartyl-tRNA synthetase [Brucella sp. BO2]
 gi|306407276|gb|EFM63485.1| aspartyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 595

 Score =  847 bits (2189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/592 (65%), Positives = 483/592 (81%), Gaps = 2/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y
Sbjct: 61  VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+++  TME V+RG+FEEF+ G  V+  F RI YDDAIR YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VT+HF  S F+VF+ +++ +P  EVWAIPAK  GG+RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 AVTDHFAGSGFKVFANMIANDPKVEVWAIPAK-TGGSRAFCDRMNSWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    TEAIR ++ ++DGD+CFF+AG P KF  FA DAR   
Sbjct: 360 WR-KEGDKLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+ KK+DFAHNPF+MPQGGM++L+  D L IKA+
Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKLDFAHNPFSMPQGGMDALENMDPLEIKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN + EVM++AF  VG+S++ VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDR++MLL+GAKN+RE+SLFPM+Q   DLLMG+PS VS  QLR+L +R+ 
Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSDVSPAQLRDLHVRLA 590


>gi|319404162|emb|CBI77755.1| Aspartyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 596

 Score =  847 bits (2187), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/596 (66%), Positives = 487/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L   D+G  VRLSGWVHRVR HGGI+F+D+RDH+GITQ+V +P+S  F 
Sbjct: 1   MHRYRSHNCAALRKCDMGRQVRLSGWVHRVRDHGGILFIDLRDHFGITQIVVDPNSPAFT 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + VRSEWV+ +DG V +R+ E INA + TG+IE+ A+++EILS A+ELPLPVFGE +Y
Sbjct: 61  IIEKVRSEWVIRVDGEVRARADEVINAALPTGEIEIFAKEVEILSKADELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+T+HKNI++RT II S+R  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTEIIASIRRHMQDCAFTEFTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DIL TME ++R +FEEF++G +V+ NF RI YD+A+++YG+DKPDLRNPIIM 
Sbjct: 241 MSFVEQEDILVTMEPIIRSIFEEFADGKSVTQNFPRISYDEAMQKYGSDKPDLRNPIIME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF  S F+VFS+IL+ +    +WAIPAK  GG+RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 DVSQHFRDSGFKVFSQILASDQNACIWAIPAK-NGGSRAFCDRMNAWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E+GN  G GP+AK++    +EAIRV+L ++ GD+CFF+AGDP KF SF+  AR  I
Sbjct: 360 WR-EENGNFEGAGPIAKNIGEQRSEAIRVQLGLESGDACFFVAGDPKKFASFSGAARTRI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+  CF F WI+DFPF+EWNE+EKK+DFAHNPF+MPQGG  +L   D LS+KAF
Sbjct: 419 GEELGLIDRECFSFAWIIDFPFFEWNEDEKKLDFAHNPFSMPQGGKNALDSQDPLSLKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG+EIASGGIRNH  E+ML+ F+  G+S+EVVE RFGGLYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKVFNLAGLSQEVVEERFGGLYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AG+DRIVMLL G KN+REVSLFPM+Q   DLLM +PS VS  QL +LG+RI    K
Sbjct: 539 AGVDRIVMLLQGVKNLREVSLFPMNQQALDLLMSAPSDVSAVQLSDLGIRITPTVK 594


>gi|90419528|ref|ZP_01227438.1| aspartyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336465|gb|EAS50206.1| aspartyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 595

 Score =  847 bits (2187), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/596 (65%), Positives = 482/596 (80%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+HSC  L   DVG+ VRLSGW HR+R HGG++F+D+RDHYG+TQVV +PDS  F 
Sbjct: 1   MHRYRSHSCAALRKEDVGNTVRLSGWAHRIRDHGGLLFIDLRDHYGLTQVVVDPDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA++VR EWV+ +DG V +RSAET+N  + TG IE+ A++IE+LS A+ELPLPVFGE +Y
Sbjct: 61  IAETVRGEWVIRVDGEVKARSAETVNPKLPTGAIEVFAKEIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKN+++RT+I++ MR  M    F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNMMRRTQIVSKMRTLMGDAGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DR  GEFYQLD+E
Sbjct: 181 LVPSRLHNGMFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDEDPRADRFYGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DIL+TME V+R VFE F++G  VS +F RI Y +++R+YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDILSTMEPVIRDVFEAFADGKPVSQSFRRIPYAESMRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ +P  EVWAIPAK  GG+RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 AVTEHFAGSGFKVFANMIAGDPAVEVWAIPAK-TGGSRAFCDRMNSWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E+G V+G GP+AK++    TEA+R +L ++ GD+CFF+AG P  F +FA  AR  +
Sbjct: 360 WR-EEAGAVSGAGPLAKNIGEERTEAVRTQLGLEAGDACFFVAGRPEAFTAFAGAARTRV 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW EEEKKIDFAHNPF+MPQGGME+L+G + L +KAF
Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWQEEEKKIDFAHNPFSMPQGGMEALEGEEPLKLKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASGGIRNH+ E M++AF   G SKE VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDIVCNGFEIASGGIRNHLPETMVKAFEIAGYSKETVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AG+DRIVMLL GAKN+RE+++FPM+Q   DLLMG+P+  S  QLR+LGLRI    K
Sbjct: 539 AGVDRIVMLLCGAKNLREIAMFPMNQQAHDLLMGAPNEASPAQLRDLGLRIAPQTK 594


>gi|256369184|ref|YP_003106692.1| aspartyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|255999344|gb|ACU47743.1| aspartyl-tRNA synthetase [Brucella microti CCM 4915]
          Length = 595

 Score =  846 bits (2186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/592 (65%), Positives = 482/592 (81%), Gaps = 2/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y
Sbjct: 61  VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+++  TME V+RG+FEEF+ G  V+  F RI YDDAIR YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VT+HF  S F+VF+ +++ +   EVWAIPAK  GG+RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 AVTDHFARSGFKVFANMIANDAKVEVWAIPAK-TGGSRAFCDRMNSWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    TEAIR ++ ++DGD+CFF+AG P KF  FA DAR   
Sbjct: 360 WR-KEGDKLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+ KKIDFAHNPF+MPQGGM++L+  D L IKA+
Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSMPQGGMDALENMDPLEIKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN + EVM++AF  VG+S++ VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDR++MLL+GAKN+RE+SLFPM+Q   DLLMG+PS VS  QLR+L +R+ 
Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSEVSPAQLRDLHVRLA 590


>gi|254701528|ref|ZP_05163356.1| aspartyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261752076|ref|ZP_05995785.1| aspartyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261741829|gb|EEY29755.1| aspartyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 595

 Score =  845 bits (2184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/592 (65%), Positives = 482/592 (81%), Gaps = 2/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y
Sbjct: 61  VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+++  TME V+RG+FEEF+ G  V+  F RI YDDAIR YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VT+HF  S F+VF+ +++ +   EVWAIPAK  GG+RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 AVTDHFAGSGFKVFANMIANDAKVEVWAIPAK-TGGSRAFCDRMNSWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    TEAIR ++ ++DGD+CFF+AG P KF  FA DAR   
Sbjct: 360 WR-KEGDKLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+ KKIDFAHNPF+MPQGGM++L+  D L IKA+
Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSMPQGGMDALENMDPLEIKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN + EVM++AF  VG+S++ VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDR++MLL+GAKN+RE+SLFPM+Q   DLLMG+PS VS  QLR+L +R+ 
Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSEVSPAQLRDLHVRLA 590


>gi|319407180|emb|CBI80819.1| Aspartyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 596

 Score =  845 bits (2184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/596 (66%), Positives = 486/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L   D+G  VRLSGW+HRVR HGGI+F+D+RDH+GITQ+V +P+S  F 
Sbjct: 1   MHRYRSHNCAALRKCDMGRQVRLSGWIHRVRDHGGILFIDLRDHFGITQIVVDPNSPAFT 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + VRSEWV+ +DG V +R+ E IN  + TG+IE+ A+++EILS A+ELPLPVFGE +Y
Sbjct: 61  IIEKVRSEWVIRVDGEVRARADEVINTALPTGEIEIFAKEVEILSKADELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+T+HKNI++RT II S+R  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTEIIASIRRHMQDCAFTEFTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DIL TME ++R +FEEF++G +V+ NF RI YD+A+++YG+DKPDLRNPIIM 
Sbjct: 241 MSFVEQEDILVTMEPIIRSIFEEFADGKSVTQNFPRISYDEAMQKYGSDKPDLRNPIIME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF  S F+VFS+IL+ +    +WAIPAK  GG+RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 DVSQHFRDSGFKVFSQILASDQNACIWAIPAK-NGGSRAFCDRMNAWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E+GN  G GP+AK++    +EAIRV+L ++ GD+CFF+AGDP KF SF+  AR  I
Sbjct: 360 WR-EENGNFEGAGPIAKNIGEQRSEAIRVQLGLESGDACFFVAGDPKKFASFSGAARTRI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+  CF F WI+DFPF+EWNE+EKK+DFAHNPF+MPQGG  +L   D LS+KAF
Sbjct: 419 GEELGLIDRECFSFAWIIDFPFFEWNEDEKKLDFAHNPFSMPQGGKNALDSQDPLSLKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG+EIASGGIRNH  E+ML+ F+  G+S+EVVE RFGGLYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKVFNLAGLSQEVVEERFGGLYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDRIVMLL G KN+REVSLFPM+Q   DLLM +PS VS  QL +LG+RI    K
Sbjct: 539 AGIDRIVMLLQGVKNLREVSLFPMNQQALDLLMSAPSDVSAVQLSDLGIRITPTVK 594


>gi|17987485|ref|NP_540119.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|23501638|ref|NP_697765.1| aspartyl-tRNA synthetase [Brucella suis 1330]
 gi|148560265|ref|YP_001258732.1| aspartyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|161618720|ref|YP_001592607.1| aspartyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|163843023|ref|YP_001627427.1| aspartyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|225627252|ref|ZP_03785289.1| aspartyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|225852268|ref|YP_002732501.1| aspartyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|254704077|ref|ZP_05165905.1| aspartyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|254707022|ref|ZP_05168850.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254709869|ref|ZP_05171680.1| aspartyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254713870|ref|ZP_05175681.1| aspartyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254717073|ref|ZP_05178884.1| aspartyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|256031361|ref|ZP_05444975.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256044441|ref|ZP_05447345.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256060871|ref|ZP_05451031.1| aspartyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|256113285|ref|ZP_05454153.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|256159483|ref|ZP_05457251.1| aspartyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256254769|ref|ZP_05460305.1| aspartyl-tRNA synthetase [Brucella ceti B1/94]
 gi|256264224|ref|ZP_05466756.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|260168495|ref|ZP_05755306.1| aspartyl-tRNA synthetase [Brucella sp. F5/99]
 gi|260563792|ref|ZP_05834278.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260566675|ref|ZP_05837145.1| aspartyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261218884|ref|ZP_05933165.1| aspartyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261221948|ref|ZP_05936229.1| aspartyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261314490|ref|ZP_05953687.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317410|ref|ZP_05956607.1| aspartyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261321617|ref|ZP_05960814.1| aspartyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261324868|ref|ZP_05964065.1| aspartyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261754735|ref|ZP_05998444.1| aspartyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261757963|ref|ZP_06001672.1| aspartyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988447|ref|ZP_06101004.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265990861|ref|ZP_06103418.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994697|ref|ZP_06107254.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265997911|ref|ZP_06110468.1| aspartyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|294852116|ref|ZP_06792789.1| aspartyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|54039650|sp|P67013|SYD_BRUSU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|54042025|sp|P67012|SYD_BRUME RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225324|sp|A5VPT5|SYD_BRUO2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189082087|sp|A9MAD3|SYD_BRUC2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189082088|sp|B0CL77|SYD_BRUSI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781720|sp|C0RI89|SYD_BRUMB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|17983182|gb|AAL52383.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|23347556|gb|AAN29680.1| aspartyl-tRNA synthetase [Brucella suis 1330]
 gi|148371522|gb|ABQ61501.1| aspartyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|161335531|gb|ABX61836.1| aspartyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|163673746|gb|ABY37857.1| aspartyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|225617257|gb|EEH14302.1| aspartyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|225640633|gb|ACO00547.1| aspartyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|260153808|gb|EEW88900.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260156193|gb|EEW91273.1| aspartyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|260920532|gb|EEX87185.1| aspartyl-tRNA synthetase [Brucella ceti B1/94]
 gi|260923973|gb|EEX90541.1| aspartyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294307|gb|EEX97803.1| aspartyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261296633|gb|EEY00130.1| aspartyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261300848|gb|EEY04345.1| aspartyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261303516|gb|EEY07013.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261737947|gb|EEY25943.1| aspartyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261744488|gb|EEY32414.1| aspartyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|262552379|gb|EEZ08369.1| aspartyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|262765810|gb|EEZ11599.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263001645|gb|EEZ14220.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094470|gb|EEZ18292.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|264660644|gb|EEZ30905.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|294820705|gb|EFG37704.1| aspartyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|326408774|gb|ADZ65839.1| aspartyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538492|gb|ADZ86707.1| aspartyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 595

 Score =  845 bits (2184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/592 (65%), Positives = 482/592 (81%), Gaps = 2/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y
Sbjct: 61  VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+++  TME V+RG+FEEF+ G  V+  F RI YDDAIR YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VT+HF  S F+VF+ +++ +   EVWAIPAK  GG+RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 AVTDHFAGSGFKVFANMIANDAKVEVWAIPAK-TGGSRAFCDRMNSWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    TEAIR ++ ++DGD+CFF+AG P KF  FA DAR   
Sbjct: 360 WR-KEGDKLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+ KKIDFAHNPF+MPQGGM++L+  D L IKA+
Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSMPQGGMDALENMDPLEIKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN + EVM++AF  VG+S++ VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDR++MLL+GAKN+RE+SLFPM+Q   DLLMG+PS VS  QLR+L +R+ 
Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSEVSPAQLRDLHVRLA 590


>gi|239831579|ref|ZP_04679908.1| aspartyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239823846|gb|EEQ95414.1| aspartyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 648

 Score =  845 bits (2182), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/592 (65%), Positives = 482/592 (81%), Gaps = 2/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS  F+
Sbjct: 54  MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 113

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R+ + +NAN+ TG++E+ A +IE+L+ A+ELPLPVFGE +Y
Sbjct: 114 VAETVRGEWVIRVDGEVKARADDAVNANLPTGEVEIFATEIEVLAAAKELPLPVFGEPDY 173

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM    F E +TPILTASSPEGARDF
Sbjct: 174 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFTTPILTASSPEGARDF 233

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 234 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 293

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+++  TME V+RG+FEEF+ G  V+  F RI YDDAIR YG+DKPDLRNPI M 
Sbjct: 294 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTQKFRRIAYDDAIRTYGSDKPDLRNPIEMQ 353

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ +P  EVWAIPAK  GG+RAFCDRMN WA+ +GQPGL YIF
Sbjct: 354 AVTEHFAGSGFKVFANMIANDPKVEVWAIPAK-TGGSRAFCDRMNSWAQGEGQPGLGYIF 412

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    TEA+R +L + DGD+CFF+AG P KF  FA DAR   
Sbjct: 413 WR-KEGDKLEGAGPIAKNIGEERTEALRNQLGLGDGDACFFVAGLPSKFYKFAGDARTRA 471

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+ KK+DFAHNPF+MPQGGM++L+  D L+IKA+
Sbjct: 472 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKLDFAHNPFSMPQGGMDALENQDPLAIKAY 531

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN + +VM++AF  VG+S++ VE RFGGLYRAFQ G PPHGG+A
Sbjct: 532 QYDLVCNGFEIASGSIRNQLPDVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 591

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDR++MLL+GAKN+RE+SLFPM+Q   DLLM +PS V+  QLR+L +R+ 
Sbjct: 592 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMNAPSDVTPAQLRDLHIRLA 643


>gi|62289704|ref|YP_221497.1| aspartyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699634|ref|YP_414208.1| aspartyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189023954|ref|YP_001934722.1| aspartyl-tRNA synthetase [Brucella abortus S19]
 gi|237815193|ref|ZP_04594191.1| aspartyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|254689016|ref|ZP_05152270.1| aspartyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254697151|ref|ZP_05158979.1| aspartyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730047|ref|ZP_05188625.1| aspartyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256257266|ref|ZP_05462802.1| aspartyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260545540|ref|ZP_05821281.1| aspartyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260754509|ref|ZP_05866857.1| aspartyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260757730|ref|ZP_05870078.1| aspartyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260761555|ref|ZP_05873898.1| aspartyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883538|ref|ZP_05895152.1| aspartyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297248111|ref|ZP_06931829.1| aspartyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|81309434|sp|Q57DZ8|SYD_BRUAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|97196557|sp|Q2YNA7|SYD_BRUA2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238689357|sp|B2S501|SYD_BRUA1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62195836|gb|AAX74136.1| AspS, aspartyl-tRNA synthase [Brucella abortus bv. 1 str. 9-941]
 gi|82615735|emb|CAJ10731.1| Aspartyl-tRNA synthetase, class IIb:GAD domain:tRNA synthetase,
           class II (D, K and N):OB-fold nucleic acid binding
           domain:Asp [Brucella melitensis biovar Abortus 2308]
 gi|189019526|gb|ACD72248.1| aspartyl-tRNA synthetase [Brucella abortus S19]
 gi|237790030|gb|EEP64240.1| aspartyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260096947|gb|EEW80822.1| aspartyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260668048|gb|EEX54988.1| aspartyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260671987|gb|EEX58808.1| aspartyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674617|gb|EEX61438.1| aspartyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260873066|gb|EEX80135.1| aspartyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297175280|gb|EFH34627.1| aspartyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 595

 Score =  844 bits (2180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/592 (65%), Positives = 482/592 (81%), Gaps = 2/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y
Sbjct: 61  VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+++  TME V+RG+FEEF+ G  V+  F RI YDDAIR YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VT+HF  S F+VF+ +++ +   EVWAIPAK  GG+RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 AVTDHFAGSGFKVFANMIANDAKVEVWAIPAK-TGGSRAFCDRMNSWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    TEAIR ++ ++DGD+CFF+AG P KF  FA DAR   
Sbjct: 360 WR-KEGDKLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+ KKIDFAHNPF++PQGGM++L+  D L IKA+
Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSLPQGGMDALENMDPLEIKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN + EVM++AF  VG+S++ VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDR++MLL+GAKN+RE+SLFPM+Q   DLLMG+PS VS  QLR+L +R+ 
Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSEVSPAQLRDLHVRLA 590


>gi|319898852|ref|YP_004158945.1| Aspartyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402816|emb|CBI76367.1| Aspartyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 596

 Score =  843 bits (2179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/596 (66%), Positives = 484/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L   D+G  VRLSGWVHRVR HGGI+F+D+RDH+GITQ+V +P+S  F 
Sbjct: 1   MHRYRSHNCAALRKCDIGRQVRLSGWVHRVRDHGGILFIDLRDHFGITQIVVDPNSPAFT 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + VRSEWV+C+DG V  R+ E IN  + TG+IE+ A+++EILS ++ELPLPVFGE +Y
Sbjct: 61  IIEKVRSEWVICVDGEVRVRADEVINTTLSTGEIEIFAKEVEILSRSDELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+T+HKNI++RT II S+R  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTEIIASIRRHMQDCAFTEFTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI  TME ++R +FEEF++G +V+ NF RI YD+A+++YG+DKPDLRNPIIM 
Sbjct: 241 MSFVEQEDIFATMEPIMRSIFEEFADGKSVTQNFPRISYDEAMQKYGSDKPDLRNPIIME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF  S+F+VFS+IL+ +    VWAIPAK  GG+RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 DVSQHFRDSDFKVFSQILTNDKDACVWAIPAK-TGGSRAFCDRMNAWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E GN  G GP+AK++    TEAIRV+L +++GD+CFF AG+P KF SFA   R  I
Sbjct: 360 WR-EEDGNFEGAGPIAKNIGEQRTEAIRVQLGLENGDACFFTAGNPKKFASFAGAVRTRI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+  CF F WI+DFPF+EWNE+EKK+DFAHNPF+MPQGG ++L   D LS+KAF
Sbjct: 419 GEELDLIDRGCFSFAWIVDFPFFEWNEDEKKLDFAHNPFSMPQGGKDALDSEDPLSLKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG+EIASGGIRNH  E+ML+ F+  G+SKEVVE RFGGLYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKIFNIAGLSKEVVEERFGGLYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AG+DRIVMLL G KN+REVSLFPM+Q   DLLM +PS VS  QL +LG+RI    K
Sbjct: 539 AGVDRIVMLLQGVKNLREVSLFPMNQQALDLLMSAPSDVSAVQLCDLGIRIAPTVK 594


>gi|254693499|ref|ZP_05155327.1| aspartyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261213757|ref|ZP_05928038.1| aspartyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260915364|gb|EEX82225.1| aspartyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
          Length = 595

 Score =  843 bits (2177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/592 (65%), Positives = 482/592 (81%), Gaps = 2/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y
Sbjct: 61  VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+++  TME V+RG+FEEF+ G  V+  F RI YDDAIR YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VT+HF  S F+VF+ +++ +   EVWAIPAK  GG+RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 AVTDHFAGSGFKVFANMIANDAKVEVWAIPAK-TGGSRAFCDRMNSWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    TEAIR ++ ++DGD+CFF+AG P KF  FA DAR   
Sbjct: 360 WR-KEGDKLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+ KKIDFAHNPF++PQGGM++L+  D L IKA+
Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSLPQGGMDALENMDPLEIKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN + EVM++AF  VG+S++ VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDR++MLL+GAKN+RE+S+FPM+Q   DLLMG+PS VS  QLR+L +R+ 
Sbjct: 539 AGIDRVIMLLVGAKNLREISVFPMNQQALDLLMGAPSEVSPAQLRDLHVRLA 590


>gi|306843697|ref|ZP_07476297.1| aspartyl-tRNA synthetase [Brucella sp. BO1]
 gi|306276007|gb|EFM57716.1| aspartyl-tRNA synthetase [Brucella sp. BO1]
          Length = 595

 Score =  842 bits (2174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/592 (65%), Positives = 481/592 (81%), Gaps = 2/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y
Sbjct: 61  VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+++  TME V+ G+FEEF+ G  V+  F RI YDDAIR YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEEVWETMEPVMHGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VT+HF  S F+VF+ +++ +   EVWAIPAK  GG+RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 AVTDHFAGSGFKVFANMIANDAKVEVWAIPAK-TGGSRAFCDRMNSWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    TEAIR ++ ++DGD+CFF+AG P KF  FA DAR   
Sbjct: 360 WR-KEGDKLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+ KK+DFAHNPF+MPQGGM++L+  D L IKA+
Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKLDFAHNPFSMPQGGMDALENMDPLEIKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN + EVM++AF  VG+S++ VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDR++MLL+GAKN+RE+SLFPM+Q   DLLMG+PS VS  QLR+L +R+ 
Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSEVSPAQLRDLHVRLA 590


>gi|49474342|ref|YP_032384.1| aspartyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|62287556|sp|Q6FZI4|SYD_BARQU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|49239846|emb|CAF26239.1| Aspartyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 597

 Score =  839 bits (2168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/596 (64%), Positives = 483/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L   DVG  VRLSGWVHRVR HGGI+F+D+RDH+GITQ+VANP S  FE
Sbjct: 1   MHRYRSHNCAALRKHDVGKHVRLSGWVHRVRDHGGILFVDLRDHFGITQIVANPASPAFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + VRSEWV+ +DG V +RS E IN  + TG+IE+  +++EILS ++ELPLPVFGE +Y
Sbjct: 61  IIEKVRSEWVIRVDGEVCARSDEVINTVLPTGEIEIFVKEVEILSKSDELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+T+HKNI++RT II ++R  M    F E +TP+LTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTEIITAIRRSMQNNGFTEFTTPLLTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+  TME ++R +FEEF+NG  V+ NF RI YD+AI++YG+DKPDLRNPIIM 
Sbjct: 241 MSFVEQEDVFVTMEPIMRSIFEEFANGKPVTQNFPRISYDEAIKKYGSDKPDLRNPIIMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF  S F++F++IL+ +   +VWAIPAK  GG+RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 DVSQHFYDSCFKIFAQILTNDENAQVWAIPAK-TGGSRAFCDRMNLWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E G   G GP+AK++    TEA+R++L ++ GD+CFFIAG+P KF +FA   R  I
Sbjct: 360 WR-EEEGKFEGAGPIAKNIGEQRTEALRIQLGLESGDACFFIAGNPKKFSTFAGAVRTRI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+  CF   WI+DFPF+EWNE+EKK+DFAHNPF+MPQGG  +L+  D L++KAF
Sbjct: 419 GEELDLIDRECFSLAWIVDFPFFEWNEDEKKLDFAHNPFSMPQGGKNALECQDPLTLKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG+EIASGGIRNH  E+ML+ F+  G+S+EVVE+RFG LYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKVFNLAGLSREVVEDRFGALYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AG+DRI+MLL G KN+RE++LFPM+Q   DLLM +PS VS  QLR+LG+R+    K
Sbjct: 539 AGVDRIIMLLQGVKNLREIALFPMNQQALDLLMSAPSDVSSAQLRDLGIRVAPAAK 594


>gi|49475729|ref|YP_033770.1| aspartyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|62287557|sp|Q6G330|SYD_BARHE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|49238536|emb|CAF27772.1| Aspartyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 596

 Score =  837 bits (2161), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/596 (64%), Positives = 487/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H C  L   DVG   RLSGWVHRVR HGGI+F+D+RDH+GITQ+VA+P S  F+
Sbjct: 1   MHRYRSHHCAALRKCDVGIKARLSGWVHRVRDHGGILFVDLRDHFGITQIVADPASPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + VRSEWV+ +DG V +RS E IN ++ TG+IE+ A+++EILS ++ELPLPVFGE +Y
Sbjct: 61  IIEKVRSEWVIRVDGEVRARSDEVINTSLPTGEIEIFAKEVEILSKSDELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+T+H+NI++RT II ++R  M    F E +TP+LTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETMHRNIMRRTEIIAAIRRSMQENGFTEFTTPLLTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+L TME ++R +FEEF++G  V+ +F R+ Y++A+R+YG+DKPDLRNPIIM 
Sbjct: 241 MSFVEQEDVLVTMEPIMRSLFEEFADGKPVTQSFPRLSYEEAMRKYGSDKPDLRNPIIME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF  S F+VF++IL+ +    VWAIPAK  GG+RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 DVSQHFYDSGFKVFAQILANDENARVWAIPAK-TGGSRAFCDRMNGWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E G   G GP+AK++    TEA+R++L +++GD+CFF+AGDP KF  FA  AR  +
Sbjct: 360 WR-EEQGKFEGAGPIAKNIGEQRTEALRMQLGLENGDACFFVAGDPKKFLPFAGAARTRV 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ +CF   WI+DFPF+EWNEEEKK+DFAHNPF+MPQGG ++L+  D L++KAF
Sbjct: 419 GEELDLVDRDCFSLAWIVDFPFFEWNEEEKKLDFAHNPFSMPQGGKDALECQDPLTLKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG+EIASGGIRNH  E+ML+ F+  G+SKEVVE+RFGGLYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKVFNLAGLSKEVVEDRFGGLYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AG+DRI+MLL G KN+REV+LFPM+Q   DLLM +PS VS  QLR+LG+RI    K
Sbjct: 539 AGVDRIIMLLQGVKNLREVALFPMNQQALDLLMSAPSDVSPVQLRDLGIRIAPAAK 594


>gi|319405614|emb|CBI79237.1| Aspartyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 596

 Score =  832 bits (2148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/592 (66%), Positives = 481/592 (81%), Gaps = 2/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L   D+G  VRLSGWVHRVR HGGI+F+D+RDH+GITQ+V +P+S  F 
Sbjct: 1   MHRYRSHNCAALRKCDMGRQVRLSGWVHRVRDHGGILFIDLRDHFGITQIVVDPNSPAFR 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + VRSEWV+ +DG V +R+ E +N  + TG+IE+ A+++EILS A+ELPLPVFGE +Y
Sbjct: 61  IIEKVRSEWVIRVDGEVRARADEVVNTALPTGEIEIFAKEVEILSKADELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+T+HKNI++RT II S+R  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTAIIASIRRHMQNCAFTEFTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHQGQFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI  T+E ++R +FEEF++G +V+ NF RI YD+A+++YG+DKPDLRNPIIM 
Sbjct: 241 MSFVEQEDIFVTIEPIIRSIFEEFADGKSVTQNFPRISYDEAMQKYGSDKPDLRNPIIME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF  S F+VFS+IL+ +    VWAIPAK  GG+RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 DVSKHFQDSGFKVFSQILASDQNACVWAIPAK-NGGSRAFCDRMNVWAQCEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E+G   G GP+AK++    TEAIR++L ++ GD+CFF+AGDP KF SF+  AR  I
Sbjct: 360 WR-EENGIFEGAGPIAKNIGEQRTEAIRMQLGLESGDACFFVAGDPKKFASFSGAARTRI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ +CF F WI+DFPF+EWNEEEKK+DFAHNPF+MPQGG  +L   D LS+KAF
Sbjct: 419 GEELGLIDRDCFSFAWIVDFPFFEWNEEEKKLDFAHNPFSMPQGGENALDLQDPLSLKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG EIASGGIRNH  E+ML+ F  VG SKEVVE RFG LYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGCEIASGGIRNHSPEMMLKVFKLVGFSKEVVEERFGALYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDRIVMLL G KN+REVSLFPM+Q   DLLM +PS VS  QL +LG+RI 
Sbjct: 539 AGIDRIVMLLQGVKNLREVSLFPMNQQALDLLMSAPSNVSAMQLCDLGIRIA 590


>gi|319408645|emb|CBI82300.1| Aspartyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 596

 Score =  827 bits (2135), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/596 (64%), Positives = 479/596 (80%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L   DVG  VRLSGWV+RVR HGGI+F+D+RDH+GITQ+V +P S  F+
Sbjct: 1   MHRYRSHNCAALRKCDVGIQVRLSGWVYRVRDHGGILFIDLRDHFGITQIVVDPHSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR+E V+ +DG V +R+ E INA + TG++E+ A ++EILS ++ELPLPVFGE +Y
Sbjct: 61  TVEKVRAESVIRVDGEVRARADEVINATLPTGEVEVFASEVEILSKSDELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR T+HKNI++RT II S+R  M    F E +TP+LTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRTTMHKNIMRRTEIIASIRKHMQNCAFTEFTTPLLTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+L TME ++R VFEEF++G  V+ +F RI YD+AI++YG+DKPDLRNPIIM 
Sbjct: 241 MSFVEQEDVLATMEPIIRSVFEEFADGKCVTQSFPRISYDEAIQKYGSDKPDLRNPIIME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF  S F+VF++IL+ +   +VWAIPAK  GG+R+FCDRMN WA+ +GQPGL YIF
Sbjct: 301 SVSQHFYDSGFKVFAQILANDKHAQVWAIPAK-TGGSRSFCDRMNAWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E+G   G GP+AK++    TEAIR +L ++ GD+CFF+AG+P KF SFA  AR  +
Sbjct: 360 WR-QENGVFEGAGPIAKNIGEQRTEAIRAQLGLESGDACFFVAGNPKKFASFAGAARTRV 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+  CF   WI+DFPF+EWNE+EKK+DFAHNPF+MPQGG E++   D L+IKAF
Sbjct: 419 GEELDLIDHKCFSLAWIVDFPFFEWNEDEKKLDFAHNPFSMPQGGKEAIDCQDPLTIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG+EIASGGIRNH  E+ML+ F   G+S+EVVE RFGGLYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKIFKLAGLSEEVVEERFGGLYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDRIVMLL G KN+RE+SLFPM+Q   DLLM +PS VS  QL +LG+RIV   K
Sbjct: 539 AGIDRIVMLLQGVKNLREISLFPMNQQALDLLMSAPSEVSALQLSDLGIRIVRTAK 594


>gi|304391963|ref|ZP_07373905.1| aspartyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303296192|gb|EFL90550.1| aspartyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 594

 Score =  825 bits (2130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/591 (64%), Positives = 472/591 (79%), Gaps = 2/591 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C DL  S+VG  VRLSGWVHRVR HGG++F+D+RDHYGITQVV +PDS  F+
Sbjct: 1   MHRYRSHTCADLRASNVGDTVRLSGWVHRVRDHGGVLFIDLRDHYGITQVVIDPDSNGFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ VRSEWV+C++G V +R+ ET+N+++ TG IE+ A++IE+LS A ELP+PVFGE+EY
Sbjct: 61  TAEDVRSEWVICLEGNVKARTEETVNSDLPTGDIEIYAREIEVLSQAAELPMPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLH NI+KR  +I+ MR RM    F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHANIMKRQAVISDMRSRMETAGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGNFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+L TME V+  VFE+F++G TV+ N+ RI Y +AIR+YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVLTTMEPVITEVFEQFADGKTVTKNWPRIPYREAIRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+EHF  S F+VF+ IL  +   EVWAIP K G G+R  CDRMN WA+ +GQPG+ YIF
Sbjct: 301 NVSEHFRGSGFKVFAGILDADDNNEVWAIPVK-GAGSRKHCDRMNSWAQGEGQPGMGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G     GP+AK++    TEA+R +L ++ GD+ FF AG+P KF SFA DAR   
Sbjct: 360 WRELE-GKFDAAGPIAKNIGPERTEAMREQLGLELGDAVFFAAGNPAKFASFAGDARTKA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+E G+IN N FE CWI+DFPFYEW+EE KK++F HNPF+MP+GG+++L   D L I A 
Sbjct: 419 AEEAGLINENAFELCWIVDFPFYEWDEENKKVEFGHNPFSMPKGGIDALNNEDPLKIDAM 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASGGIRNH+ E M++AF   G+S+  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDMVCNGFEIASGGIRNHLPETMVKAFGITGLSQADVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVML+ G KN+RE+++FPM+Q   DLLMG+PS V   QL++L L++
Sbjct: 539 AGVDRIVMLICGTKNLREITMFPMNQQAKDLLMGAPSAVDKPQLKDLHLKL 589


>gi|114704848|ref|ZP_01437756.1| aspartyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114539633|gb|EAU42753.1| aspartyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 595

 Score =  824 bits (2128), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/597 (63%), Positives = 475/597 (79%), Gaps = 2/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+HSC DL  + VG  VRLSGW HR+R HGG++F+D+RDHYG+TQVV +PDS  F 
Sbjct: 1   MHRYRSHSCADLRSAHVGDTVRLSGWAHRIRDHGGLLFIDLRDHYGLTQVVVDPDSPAFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VR EWV+ IDG V +RSAET+N  + TG IE+ A++IE+LS A+ELPLPVFGE EY
Sbjct: 61  TAEAVRGEWVIRIDGEVKARSAETVNPKLPTGDIEIFAREIEVLSPAKELPLPVFGEPEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI++RT+II+ +R  M    F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMRRTKIISKIRELMQGAAFTEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DR  GEFYQLD+E
Sbjct: 181 LVPSRLHNGMFYALPQAPQQYKQLLMISGFDRYFQIAPCFRDEDPRADRFYGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI  TME V+R VF+ F++G  V++ F RI Y +++R+YGTDKPDLRNPI M 
Sbjct: 241 MSFVEQEDIFQTMEPVIRDVFKTFADGKPVTDTFRRIPYAESMRKYGTDKPDLRNPIEMS 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ +   EVWAIPAK  GG+RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 AVTEHFAGSGFKVFANMIANDEKVEVWAIPAK-TGGSRAFCDRMNSWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   ++G GP+AK++    TEA+R +L ++ GD+CFF+AG P KF +FA  AR  +
Sbjct: 360 WRA-EGDEISGAGPLAKNIGPERTEAVRTQLGLESGDACFFVAGRPEKFMAFAGSARTRV 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + +E  WI+DFPFYE++E+EKKIDFAHNPF+MPQGGM++L+  + LSIKAF
Sbjct: 419 GEELNLVDRDRYELAWIVDFPFYEYDEDEKKIDFAHNPFSMPQGGMDALQNEEPLSIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASGGIRN + E M++AF   G  +  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDVVCNGFEIASGGIRNSVPETMVKAFELAGYDQATVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           AGIDRIVMLL GA+N+RE++LFPM+Q   DLLMG+P+  S  QLRELGLR+    K+
Sbjct: 539 AGIDRIVMLLCGARNLREIALFPMNQQAFDLLMGAPAEASPAQLRELGLRMAPKAKE 595


>gi|300024344|ref|YP_003756955.1| aspartyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526165|gb|ADJ24634.1| aspartyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 603

 Score =  818 bits (2114), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/601 (63%), Positives = 470/601 (78%), Gaps = 8/601 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +HRYR+H+CG L  ++VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQVVA+PDSA F+
Sbjct: 6   LHRYRSHTCGALRKANVGETVRLSGWVHRVRDHGGVLFIDLRDHYGVTQVVADPDSAAFK 65

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VRSEWV+ +DG V  R   T+N  + TG+IEL A +IE+LS A+ELP+PVFGE +Y
Sbjct: 66  AAEAVRSEWVIRVDGKVRDRPDGTVNGELPTGEIELYATEIEVLSAAKELPVPVFGEPDY 125

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+TLH  I+KR  I  ++R RM    F E  TPILTASSPEGARDF
Sbjct: 126 PEDLRLQYRFLDLRRETLHAIIMKRLEITRAIRKRMHDAGFNEFPTPILTASSPEGARDF 185

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+++G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 186 LVPSRIHEGKFYALPQAPQQYKQLLMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 245

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+ +TME VL G+FEEF+NG  V+NN+ RI YD AI +YG+DKPDLRNPI M 
Sbjct: 246 MSFVEQEDVFSTMEPVLTGLFEEFANGKPVTNNWPRIPYDTAIAKYGSDKPDLRNPIEMQ 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VTEHF  S F+VF+ ++  +P   VWAIPA   GG+RAFCDRMN WA+ +GQPGL YIF
Sbjct: 306 DVTEHFRGSGFKVFAGMIEKDPKVRVWAIPAP-TGGSRAFCDRMNSWAQGEGQPGLGYIF 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G   G GP+AK++      AI+ +L ++DGD+ FF AG+P  F  FA  AR+  
Sbjct: 365 WRDGEDG---GAGPIAKNIGPERAGAIKAQLSLKDGDAVFFTAGNPANFYKFAGAARDRA 421

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----NDLLS 476
            QEL ++  + +   WI+DFPFYEWNEEEKKIDF+HNPF+MPQGG E+L       D L 
Sbjct: 422 GQELKLVKEDQYALAWIVDFPFYEWNEEEKKIDFSHNPFSMPQGGGEALDAATTNEDRLK 481

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +KA+QYD+VCNG+EIASGGIRNH  EVM++AF   G+  EVVE RFGGL+RAFQ G PPH
Sbjct: 482 LKAYQYDIVCNGYEIASGGIRNHKPEVMIKAFGIAGLGPEVVEQRFGGLFRAFQYGAPPH 541

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+AAGI+RIVMLL G K VREV+LFPM+Q   DLLMG+PS V+ +QLREL LR+V   K
Sbjct: 542 GGMAAGIERIVMLLTGGKTVREVALFPMNQQANDLLMGAPSDVTPKQLRELSLRVVAPEK 601

Query: 597 K 597
           K
Sbjct: 602 K 602


>gi|254473442|ref|ZP_05086839.1| aspartyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211957558|gb|EEA92761.1| aspartyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 594

 Score =  815 bits (2105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/591 (63%), Positives = 469/591 (79%), Gaps = 2/591 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  ++VG   RLSGWVHRVR HGG++F+D+RDHYGITQ V +PDSA F+
Sbjct: 1   MHRYRSHTCGELRANNVGETTRLSGWVHRVRDHGGLLFIDLRDHYGITQCVVDPDSAAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VRSEW + IDG V  RS ETIN N+ TG+IE+  + +E+L  ++ELPLPVFGE EY
Sbjct: 61  LAETVRSEWCIRIDGDVKKRSDETINENLGTGEIEIFIRDMEVLGDSQELPLPVFGELEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRRDTLH N++KRT+IINSMR RM    F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRDTLHANLMKRTKIINSMRKRMNDAEFNEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQFKQLLMMSGFDKYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+L TME V+RGVFEEFS G  V+  F RI Y +AIR+YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEDVLQTMEPVIRGVFEEFSEGKPVTKEFPRIPYAEAIRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF++++  +P  +VWAIPA   GG+RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 EVTEHFAGSGFKVFARMIESDPKVQVWAIPAP-KGGSRAFCDRMNSWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +R +E   +AG GP+AK++    TEA+R +L + +GD+ FF AGDP KF  FA  AR   
Sbjct: 360 FRKEED-TIAGAGPIAKNIGAERTEAVRTQLGLDEGDAVFFAAGDPKKFADFAGKARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I+ + F  CWI+DFP YEW+EE KK+DF HNPF+MP+GGM+ L   + L + A+
Sbjct: 419 AEELNLIDEDQFALCWIVDFPMYEWDEENKKVDFCHNPFSMPEGGMDGLTNVEPLELNAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG+EI SG IRNH  EVM +AF   G  + ++E +FGG+YRAFQ G PPHGG+A
Sbjct: 479 QYDVVCNGYEIGSGAIRNHQVEVMKKAFEIAGYDESLLEEKFGGMYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL+GAKN+REV+LFPM+Q   DL+MG+PS V   QLR+L +R+
Sbjct: 539 AGVDRIVMLLVGAKNLREVTLFPMNQQAQDLMMGAPSDVFPAQLRDLHIRL 589


>gi|312113634|ref|YP_004011230.1| aspartyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218763|gb|ADP70131.1| aspartyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 637

 Score =  811 bits (2096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/597 (62%), Positives = 466/597 (78%), Gaps = 3/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +H YR+ +CG L  +D G  VRLSGWVHRVR HGG++F+D+RDHYG+TQ V +P +  F+
Sbjct: 42  LHAYRSTTCGALRRADAGKTVRLSGWVHRVRDHGGLLFIDLRDHYGLTQCVVDPSAPAFK 101

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VR+EWV+ IDG V+ R  +T+N N+ TG++E+    +++LS AEELPLPVFGE EY
Sbjct: 102 SAEAVRAEWVIRIDGDVVIREGDTVNPNLPTGEVEVRIGTLDVLSKAEELPLPVFGEPEY 161

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+TLH+NI++RT+II  MR RM+   F E STPILTASSPEGARDF
Sbjct: 162 PEDVRLRYRFLDLRRETLHRNIIQRTKIIADMRKRMVDAGFTEFSTPILTASSPEGARDF 221

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 222 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 281

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ +TME V+R VF+ F+ G  V++ F RI YDDAI +YGTDKPDLRNPI M 
Sbjct: 282 MSFVTQEDVWDTMEPVIRAVFDGFAGGKPVTDVFPRIAYDDAITKYGTDKPDLRNPIEMQ 341

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+ +L  +    VWAIP K  GG+RAFCDRMN WA+ QGQPGL YIF
Sbjct: 342 DVSEHFRGSGFKVFAGMLEKDKKARVWAIPGK-TGGSRAFCDRMNSWAQQQGQPGLGYIF 400

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GPVAK++    T AI  +L + DGD+ FF+ GDP KF  FA +AR  +
Sbjct: 401 WR-KEGDALEGAGPVAKNIGPERTAAIAAQLGVGDGDAVFFVGGDPAKFYKFAGEARTRV 459

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEWNE+EKK+DFAHNPF+MPQGG+E+L+  D L +KA+
Sbjct: 460 GEELNLVDRDRFELAWIVDFPFYEWNEDEKKVDFAHNPFSMPQGGLEALETRDPLELKAY 519

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN   E M+ AF  VG++K  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 520 QYDLVCNGFEIASGSIRNQSPETMVTAFEKVGLTKADVEERFGGLYRAFQFGAPPHGGMA 579

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRIVML+ GAKN+RE+SLFPM+Q   DLLMG+PS    +QLR+L +R+   PKK
Sbjct: 580 FGIDRIVMLITGAKNLREISLFPMNQQAEDLLMGAPSEAGAKQLRDLHIRL-NLPKK 635


>gi|328543994|ref|YP_004304103.1| Aspartyl-tRNA synthetase [polymorphum gilvum SL003B-26A1]
 gi|326413738|gb|ADZ70801.1| Aspartyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
          Length = 593

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/591 (62%), Positives = 460/591 (77%), Gaps = 3/591 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CGDL  S  G   RLSGWVHRVR HGG++F+D+RDHYGITQ V +PDSA F+
Sbjct: 1   MHRYRSHTCGDLRASHAGETARLSGWVHRVRDHGGLLFIDLRDHYGITQCVVDPDSAAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VRSEW + IDG V  RSAET+N N+ TG+IEL  + +E+L  A ELPLPVFGE EY
Sbjct: 61  AAETVRSEWCIRIDGEVKRRSAETVNPNLPTGEIELFIRDLEVLGPARELPLPVFGEPEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R  YRFLDLRR+TLH+NI+ RT++I  +R RM    F E  TPILTASSPEGARDF
Sbjct: 121 PEDVRLTYRFLDLRRETLHRNIMTRTKVIADIRRRMGEIGFAEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV QDD+  TME V+RG+FE FS G  V+  F RI Y +AI +YGTDKPDLRNPI+M 
Sbjct: 241 MSFVTQDDLFATMEPVIRGLFETFSEGKPVTQAFPRIPYAEAIAKYGTDKPDLRNPIVMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+  F  S F++F+++L  +P   VWAIPA   GG+RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 DVSAQFADSGFKIFARMLE-DPKNRVWAIPAP-KGGSRAFCDRMNSWAQGEGQPGLGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GPVAK++    +EAIR +L + +GD+ FF AGDP KF  FA  AR  +
Sbjct: 359 WRR-EGDVLEGAGPVAKNIGHERSEAIRAQLGLDEGDAVFFTAGDPKKFADFAGKARTRV 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ N FE  WI+DFP YEW+E+EKK++F+HNPF+MPQGG+E L+  D L + A+
Sbjct: 418 GEELDLIDQNRFELAWIVDFPMYEWDEDEKKVEFSHNPFSMPQGGLEGLETTDPLELNAY 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG+EIASG IRNH  E+M +AF+  G  + V+E RFGG+YRAFQ G PPHGG+A
Sbjct: 478 QYDMVCNGYEIASGAIRNHNPEIMKKAFAIAGYDETVLEERFGGMYRAFQYGAPPHGGMA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GIDRIVML +GAKN+REV+LFPM+Q   DLLMG+PS  + +QLREL +R+
Sbjct: 538 FGIDRIVMLFVGAKNLREVTLFPMNQQANDLLMGAPSEPTTKQLRELHIRL 588


>gi|299133732|ref|ZP_07026926.1| aspartyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298591568|gb|EFI51769.1| aspartyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 590

 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/591 (62%), Positives = 460/591 (77%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  SD+ S VRLSGW HR+R HGG++F+D+RDHYG+TQ V +PDS  F+
Sbjct: 1   MHRYRSHTCGALRESDIDSNVRLSGWCHRIRDHGGLLFIDLRDHYGMTQCVIDPDSKAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSEWV+ IDG V  R   T N ++ TG +E+    IE+L  A ELPLPVFG+ EY
Sbjct: 61  LAEKLRSEWVVKIDGKVRRRPEGTDNPDLPTGAVEVFIADIEVLGEAAELPLPVFGDLEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+ LH+NI+ R +II+SMR RM  E F E  TPILTASSPEGARDF
Sbjct: 121 PEEVRLKYRFLDLRREKLHQNIMTRGQIIDSMRARMKKEGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHAGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV QDD+   ME V+ GVFE+F+NG  V+ N+ RI + +++R+YGTDKPDLRNP+IM 
Sbjct: 241 MSFVTQDDVFAAMEPVITGVFEDFANGKPVTKNWPRIPFAESLRKYGTDKPDLRNPLIMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+EHF  S F+VF+++L    G EVWAIP   GGG+RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 NVSEHFRGSGFKVFARMLE-QAGNEVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G   G GP+A ++    T AIR +L ++DGD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WR--EGGE--GAGPLANNIGPERTAAIRTQLGLKDGDAAFFVAGDPQKFWKFAGLARTKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + FE  WI+DFP YE+NEEEKK+DF+HNPF+MPQGG+E+L+  D L+IKAF
Sbjct: 415 GEELNLIDKDRFELAWIVDFPMYEYNEEEKKVDFSHNPFSMPQGGLEALQTQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH    M++AF   G  +E V  RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDIACNGYEIASGGIRNHKPAAMVKAFEIAGYGEETVVERFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS VS +QLREL +R+
Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSDVSTKQLRELHIRL 585


>gi|85717197|ref|ZP_01048154.1| aspartyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85695977|gb|EAQ33878.1| aspartyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 594

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/591 (61%), Positives = 460/591 (77%), Gaps = 2/591 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  S +   VRLSGW HR+R HGG++F+D+RDHYG+TQ VA+PDS  F 
Sbjct: 1   MHRYRSHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVADPDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSEWV+ IDG    R A T N  + TG +EL   +IE+L  A ELPLPVFGE+EY
Sbjct: 61  LAEKLRSEWVVRIDGKARRRPAGTENPELPTGNVELYVTEIEVLGPAAELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR++LH+NI+ R  I++SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRESLHQNIMTRGAIVDSMRRRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD+   +E V+ GVFEEF+ G  V+ N+ RI + DA+R+YGTDKPDLRNP++M 
Sbjct: 241 MSFVEQDDVFAAVEPVITGVFEEFAKGKPVTRNWPRIPFADAVRKYGTDKPDLRNPLLMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L  +   +VWAIP   GGG+RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLE-DSKNQVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E  +++G GP+A ++    TEA+RV+L ++ GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WREEEDKSISGAGPLANNIGPERTEAVRVQLGLKVGDAAFFVAGDPAKFWKFAGLARTRL 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + FE  WI+DFP YE+NEE+KK+DF+HNPF+MPQGG+++L   D L+I AF
Sbjct: 419 GEELNLIDKDRFELAWIVDFPMYEYNEEDKKVDFSHNPFSMPQGGLDALNTQDPLTINAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  +  V  RFGG+YRAFQ G PPHGG+A
Sbjct: 479 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGETEVVERFGGMYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLM +PS V+ +QLREL +R+
Sbjct: 539 AGVDRIVMLLCGTTNLREISLFPMNQQAEDLLMSAPSDVTPKQLRELHIRL 589


>gi|158425283|ref|YP_001526575.1| aspartyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|172048012|sp|A8IFX1|SYD_AZOC5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|158332172|dbj|BAF89657.1| aspartyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 590

 Score =  789 bits (2038), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/590 (61%), Positives = 459/590 (77%), Gaps = 6/590 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  + VG  VR+SGW HR+R HGG++F+D+RDHYG+TQVV +PDSA F 
Sbjct: 1   MHRYRTHTCGALTEAQVGDTVRVSGWCHRIRDHGGVLFVDLRDHYGLTQVVFDPDSAAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ VR+EWV+ +DG V  R   T N+ + TG++E+ A  +E+L  A ELPLPVFG+++Y
Sbjct: 61  AAEKVRAEWVIRVDGRVRLRPEGTENSELATGKVEIYATDLEVLGPAAELPLPVFGDQDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YRFLDLRR+ +H NI+KR +II+S+R RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLRYRFLDLRRERIHGNIMKRGQIIDSLRQRMKGQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV QDD+   +E V+RGVFEEF  G  V+ N+ RI Y +A+R+YG+DKPDLRNP++M 
Sbjct: 241 MSFVTQDDVFAAVEPVIRGVFEEFGGGKPVTQNWPRIPYAEALRKYGSDKPDLRNPLVMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+EHF  S F+VF+++L  +P  EVWAIP    GG+RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 NVSEHFRGSNFKVFARLLE-DPKNEVWAIPGP-TGGSRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G   G GP+A ++    T AIR +L ++DGD+ FF+AG+P KF  FA  AR  +
Sbjct: 359 WR--EGGE--GAGPLANNIGPERTAAIREQLGLKDGDAAFFVAGNPEKFYKFAGLARTKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+   FE  WI+DFPFYEW++EEKKIDF+HNPF+MPQGG+E+L G D L+IKAF
Sbjct: 415 GEELKLIDTERFELAWIVDFPFYEWSDEEKKIDFSHNPFSMPQGGLEALNGQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  +  V  RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDIACNGYEIASGGIRNHRPEAMVKAFELAGYDEATVIERFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           AGIDRIVMLL G  N+RE+SLFPM+Q   DLLMG+P+  + +Q++EL +R
Sbjct: 535 AGIDRIVMLLCGVSNLREISLFPMNQQALDLLMGAPNEATPKQMKELHIR 584


>gi|154247069|ref|YP_001418027.1| aspartyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|238686728|sp|A7IK27|SYD_XANP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|154161154|gb|ABS68370.1| aspartyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 623

 Score =  788 bits (2036), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/625 (58%), Positives = 465/625 (74%), Gaps = 31/625 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  + VG  VRLSGW HR+R HGG++F+D+RDHYG+TQVV +PDSA F+
Sbjct: 1   MHRYRSHTCGALSTAQVGEIVRLSGWCHRIRDHGGVLFIDLRDHYGLTQVVVDPDSAAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ VR+EWV+ IDG V  R   T N ++ TG +E+ A ++E+L  + ELPLPVFG+ EY
Sbjct: 61  DAEKVRAEWVIRIDGKVRLRPEGTENPDLATGAVEVYATELEVLGPSAELPLPVFGDVEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YRFLDLRR+ LH+NI+ R  II++MR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEETRLRYRFLDLRREKLHRNIMTRGAIIDAMRSRMKGQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI   +E V+ GVFE+F+ G  V+  + RI Y +++R+YGTDKPDLRNP++M 
Sbjct: 241 MSFVEQEDIFAAVEPVITGVFEQFAEGKPVTQKWPRIPYAESLRKYGTDKPDLRNPLVMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+EHF  S F+VF+++L V    EVWAIPA  GGG+RAFCDRMN WA+S+GQPGL YI 
Sbjct: 301 NVSEHFRGSGFKVFARMLEVEKN-EVWAIPAP-GGGSRAFCDRMNSWAQSEGQPGLGYIM 358

Query: 361 WR-----------------LDES------------GNVAGMGPVAKHLNIVNTEAIRVRL 391
           WR                 L++S              V G GP+A ++    TEAIR +L
Sbjct: 359 WRDLSADAAAGGEKAVKDALEKSRGPGAGEGHVVEPGVVGAGPLANNIGPERTEAIRAQL 418

Query: 392 DMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK 451
           D++ GD+ FF+AGDP KF  FA  AR  + +EL +++ + FE  WI+DFPFYE++EEEKK
Sbjct: 419 DLKAGDAAFFVAGDPDKFVKFAGLARTRVGEELNLVDKDRFELAWIVDFPFYEYSEEEKK 478

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
           +DF+HNPF+MPQGG+++L   D LSIKAFQYD+ CNG+EIASGGIRNH  E M++AF   
Sbjct: 479 VDFSHNPFSMPQGGLDALNTQDPLSIKAFQYDIACNGYEIASGGIRNHRPEAMVKAFEIA 538

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   + VE RFGG+YRAFQ G PPHGG+AAG+DRIVMLL G  N+RE+SLFPM+Q   DL
Sbjct: 539 GYDAQTVEERFGGMYRAFQYGAPPHGGMAAGVDRIVMLLCGVTNLREISLFPMNQQALDL 598

Query: 572 LMGSPSTVSVEQLRELGLRIVENPK 596
           LMG+P+  + +QLREL +R     K
Sbjct: 599 LMGAPAEAAPKQLRELHIRPAPQAK 623


>gi|298291120|ref|YP_003693059.1| aspartyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296927631|gb|ADH88440.1| aspartyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 590

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/590 (61%), Positives = 458/590 (77%), Gaps = 6/590 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  SDVG+  RLSGW HR+R HGG++F+D+RDHYG+ QVV +PDS  F+
Sbjct: 1   MHRYRSHTCGALRASDVGTTARLSGWCHRIRDHGGVLFIDLRDHYGLMQVVVDPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR+EWV+ +DG V  R A T N  + TGQ+E+ A +IE+L  A ELPLPVFG+ EY
Sbjct: 61  LAETVRAEWVIRVDGRVRLRPAGTENPELPTGQVEVYATEIEVLGAAAELPLPVFGDVEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YRFLDLRR+ LHKNI+ R  II++MR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEETRLRYRFLDLRREKLHKNIMTRGAIIDAMRRRMKGQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E V+ GVFEEF++G  V+ N+ RI Y  ++++YGTDKPDLRNPI M 
Sbjct: 241 MSFVEQEDVFAAVEPVITGVFEEFADGKPVTKNWPRIPYAVSMQKYGTDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L       VWAIP    GG+RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARLLEAEQN-RVWAIPGP-TGGSRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G   G GP+A ++    T AIR +L +++GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WR--EGGE--GAGPIANNIGPERTAAIRDQLGLKEGDAAFFVAGDPAKFVKFAGAARTKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+EKKIDF+HNPF+MPQGG+++L G D L+IKAF
Sbjct: 415 GEELNLVDHDRFELAWIVDFPFYEWSEDEKKIDFSHNPFSMPQGGLDALNGQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  ++ V  RFGGLYRAFQ G PPHGG+A
Sbjct: 475 QYDIACNGYEIASGGIRNHRPEAMVKAFELAGYDEQEVVERFGGLYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           AG+DRIVMLL G  N+RE+S+FPM+Q   DLLMG+P+  S +QLREL +R
Sbjct: 535 AGVDRIVMLLCGTTNLREISIFPMNQQALDLLMGAPNEASPKQLRELHIR 584


>gi|27379254|ref|NP_770783.1| aspartyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|46577252|sp|Q89MP9|SYD_BRAJA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|27352405|dbj|BAC49408.1| aspartyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 590

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/591 (61%), Positives = 463/591 (78%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  S++G  +RLSGWVHRVR HGG++F+D+RDHYG+TQ V +PDS  F 
Sbjct: 1   MHRYRSHTCGALRESNIGETIRLSGWVHRVRDHGGVLFIDLRDHYGLTQCVVDPDSPAFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSE+V+ +DG V  R   T N ++ TG+IE+   +IE+L  A +LPLPVFG++EY
Sbjct: 61  LAEKLRSEFVIKMDGKVRRRPEGTDNDDLPTGKIEIYVSEIEVLGPAGDLPLPVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+ LH+NI+ R  II SMR RM  + F E +TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRREKLHQNIMTRVEIIKSMRRRMEGQGFFEFNTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   ME V+ GVFEEF+ G  VS N+ RI + +A+R+YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEDVFAAMEPVITGVFEEFAKGKPVSKNWRRIPFAEALRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F+VF+++L  +P  +VWAIPA  GGG+RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 EVSEHFRGSGFKVFARMLE-DPKNQVWAIPAP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G   G GP+A ++    T AIR ++ +++GD+ FF+AGDP KF  F+  ARN +
Sbjct: 359 WR--EGGE--GAGPLANNIGPERTAAIRAQIGVKEGDAAFFVAGDPDKFWKFSGLARNKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL + +   FE  WI+DFP YE+NE++KK+DF+HNPF+MPQGG+E+LKG D L+IKAF
Sbjct: 415 GEELNLTDKERFELAWIVDFPMYEYNEDDKKVDFSHNPFSMPQGGLEALKGQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH+ E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGYEIASGGIRNHVPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS  + +QLREL +R+
Sbjct: 535 AGVDRIVMLLCGTTNLREISLFPMNQQAMDLLMGAPSEATTKQLRELHVRV 585


>gi|148255261|ref|YP_001239846.1| aspartyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|166225322|sp|A5EIE6|SYD_BRASB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146407434|gb|ABQ35940.1| aspartyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 590

 Score =  782 bits (2020), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/590 (62%), Positives = 457/590 (77%), Gaps = 6/590 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  S++G  VRLSGW HR+R HGG++F+D+RDHYGITQ V +PDS  F 
Sbjct: 1   MHRYRTHTCGALRDSNIGETVRLSGWCHRIRDHGGVLFVDLRDHYGITQCVVDPDSKAFG 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSEWV+ ++G V  R   T NA + TGQ+EL    IE+L  A ELPLPVFGE+EY
Sbjct: 61  LAEKLRSEWVVRMEGKVRRRPEGTDNAELPTGQVELYVADIEVLGPAAELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+ LH+NI+ R  II+SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRREKLHQNIMTRGAIIDSMRRRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   ME V+ GVFE+F+ G  V+  + RI + +A+R+YGTDKPDLRNPI M 
Sbjct: 241 MSFVEQEDVFAAMEPVITGVFEDFAKGKPVTKGWPRIPFAEALRKYGTDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L  +   +VWAIPA  GGG+RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLE-DTKNQVWAIPAP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G   G GP+A ++    T AIR +L  ++GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WR--EGGE--GAGPLANNIGPERTAAIRTQLGTKEGDAAFFVAGDPEKFWKFAGLARTKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F   WI+DFP YE+NE++KK+DF+HNPF+MPQGG+E+L+  D L+IKAF
Sbjct: 415 GEELNLIDKDRFALAWIVDFPMYEYNEDDKKVDFSHNPFSMPQGGLEALQTKDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDIACNGYEIASGGIRNHKPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS  + +QLREL +R
Sbjct: 535 AGVDRIVMLLCGTTNLREISLFPMNQQAMDLLMGAPSEATTKQLRELHIR 584


>gi|209885455|ref|YP_002289312.1| aspartyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|229470563|sp|B6JGJ7|SYD_OLICO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|209873651|gb|ACI93447.1| aspartyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 590

 Score =  781 bits (2018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/591 (61%), Positives = 458/591 (77%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  SD+ S VRLSGW HR+R HGG++F+D+RDHYGITQ V +PDS  F 
Sbjct: 1   MHRYRSHTCGALRESDIDSNVRLSGWCHRIRDHGGLLFIDLRDHYGITQCVVDPDSKAFR 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+++RSEWV+  DG V  R   T N  + TG +E+   +IE+L  A ELP+PVFG++EY
Sbjct: 61  LAETLRSEWVVKFDGRVRRRPDGTDNPELPTGAVEVFINEIEVLGEAAELPMPVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRRD LH+NI+ R +II+SMR RM    F E  TPILTASSPEGARDF
Sbjct: 121 PEEIRLKYRFLDLRRDRLHQNIMTRGKIIDSMRARMKEVGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   ME V+ GVFE+F++G  V+ N+ RI + +A+R+YGTDKPDLRNP+IM 
Sbjct: 241 MSFVTQEDVFAAMEPVITGVFEDFADGKPVTKNWPRIPFAEALRKYGTDKPDLRNPLIMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L    G EVWAIP    GG+RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLE-QEGNEVWAIPGP-AGGSRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G   G GP+A ++    T AIR +L +++GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WR--EGGE--GAGPLANNIGPERTAAIRDQLGLKEGDAAFFVAGDPQKFWKFAGLARTKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + FE  WI+DFP YE+NE+EKK+DF+HNPF+MPQGG+E+L+  D L+IKAF
Sbjct: 415 GEELNLIDKDRFELAWIVDFPMYEYNEDEKKVDFSHNPFSMPQGGLEALQTQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH    M++AF   G  +E V  RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDIACNGYEIASGGIRNHKPAAMVKAFEIAGYGEETVIERFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS V+ +QLREL +R+
Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSDVTTQQLRELHIRL 585


>gi|75675780|ref|YP_318201.1| aspartyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|97196752|sp|Q3SS92|SYD_NITWN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|74420650|gb|ABA04849.1| aspartyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 590

 Score =  781 bits (2016), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/591 (61%), Positives = 458/591 (77%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  S +   VRLSGW HR+R HGG++F+D+RDHYG+TQ VA+PDS  F 
Sbjct: 1   MHRYRSHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVADPDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSEWV+ IDG    R A T N  + TG +E+   +IE+L  A ELPLPVFGE+EY
Sbjct: 61  LAEKLRSEWVVRIDGKARRRPAGTENPELPTGDVEIYVTEIEVLGPAAELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+ LH+NI+ R  I++SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRENLHQNIMTRGAIVDSMRKRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD+   +E V+ GVFEEF+ G  V+ N+ RI + +++R+YGTDKPDLRNP++M 
Sbjct: 241 MSFVEQDDVFAAVEPVITGVFEEFAKGKPVTRNWPRIPFAESLRKYGTDKPDLRNPLLMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L  +   +VWAIP   GGG+RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLE-DSKNQVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G   G GP+A ++    TEAIRV+L ++ GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WR--EGGE--GAGPLANNIGPERTEAIRVQLGLKAGDAAFFVAGDPAKFWKFAGLARTRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + FE  WI+DFP YE+NEE+KK+DF+HNPF+MPQGG+++L   D L+IKAF
Sbjct: 415 GEELNLIDKDRFELAWIVDFPMYEYNEEDKKVDFSHNPFSMPQGGLDALNTQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  +  V  RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGENDVVERFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS V+ +QLREL +R+
Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSEVAPKQLRELHIRL 585


>gi|91977416|ref|YP_570075.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|123721770|sp|Q135R5|SYD_RHOPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91683872|gb|ABE40174.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 590

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/591 (61%), Positives = 457/591 (77%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  SD+   VRLSGW HR+R HGG++F+D+RDHYG+TQ VA+PDS  F+
Sbjct: 1   MHRYRTHTCGALRDSDIDQTVRLSGWCHRIRDHGGLLFIDLRDHYGLTQCVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R+EWV+ IDG V  R   T N ++ TG+IEL   +IE+L  A ELPLPVFGE+EY
Sbjct: 61  DAEKLRAEWVVRIDGRVRRRPEGTDNDDLPTGKIELFITEIEVLGPAGELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ LH+NI+ R  I+++MR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDVRLRYRFLDLRREKLHQNIMTRGAIVDAMRARMKQQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV QDD+   ME V+ GVFE+F+ G  V+  + RI Y D++R+YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQDDVFAAMEPVITGVFEDFAKGKRVTKGWPRIPYADSMRKYGTDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L      +VWAIP   GGG+RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLEEERN-QVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G   G GP+A ++    TEAIR  L ++ GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WR--EGGE--GAGPLANNIGPERTEAIRAALGLKAGDAAFFVAGDPSKFVKFAGLARTKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F   W++DFP YE+NE++KK+DF+HNPF+MPQGGM++L G D L+IKAF
Sbjct: 415 GEELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMDALLGQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNGFEIASGGIRNH  E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGFEIASGGIRNHRPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS V+ +QLREL +R+
Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSQVTPKQLRELHIRL 585


>gi|146340332|ref|YP_001205380.1| aspartyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|166225323|sp|A4YTC4|SYD_BRASO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146193138|emb|CAL77150.1| Aspartyl-tRNA synthetase / asparaginyl-tRNA synthetase
           (Aspartate-/asparagine-tRNA ligase) (AspRS)
           [Bradyrhizobium sp. ORS278]
          Length = 590

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/590 (61%), Positives = 456/590 (77%), Gaps = 6/590 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  S++G  VRLSGW HR+R HGG++F+D+RDHYGITQ V +PDS  F 
Sbjct: 1   MHRYRTHTCGALRDSNIGETVRLSGWCHRIRDHGGVLFVDLRDHYGITQCVVDPDSKAFG 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSEWV+ ++G V  R   T N  + TGQ+EL    IE+L  A ELPLPVFGE++Y
Sbjct: 61  LAEKLRSEWVVRMEGKVRHRPEGTENPELPTGQVELYVADIEVLGPAAELPLPVFGEQDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRRD LH+NI+ R  II+SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRDRLHQNIMTRGAIIDSMRRRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   ME V+ GVFE+F+ G  V+  + RI + +A+R+YGTDKPDLRNP+ M 
Sbjct: 241 MSFVEQEDVFAAMEPVITGVFEDFAKGKPVTKGWPRIPFAEALRKYGTDKPDLRNPLEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L  +P  +VWAIPA  GGG+RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLE-DPKNQVWAIPAP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G   G GP+A ++    T AIR +L  ++GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WR--EGGE--GAGPLANNIGPERTAAIRSQLGTKEGDAAFFVAGDPDKFWKFAGLARTKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F   WI+DFP YE+NE++KK+DF+HNPF+MPQGG+E+L   D L+IKAF
Sbjct: 415 GEELNLIDKDRFALAWIVDFPMYEYNEDDKKVDFSHNPFSMPQGGLEALTTKDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDIACNGYEIASGGIRNHKPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS  + +QLREL ++
Sbjct: 535 AGVDRIVMLLCGTTNLREISLFPMNQQAMDLLMGAPSEATTKQLRELHIK 584


>gi|92117639|ref|YP_577368.1| aspartyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|123083659|sp|Q1QLI9|SYD_NITHX RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91800533|gb|ABE62908.1| aspartyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 590

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/591 (61%), Positives = 458/591 (77%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  S +   VRLSGW HR+R HGG++F+D+RDHYG+TQ VA+PDS  F 
Sbjct: 1   MHRYRSHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVADPDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSEWV+ IDG    R A T N  + TGQIE+   +IE+L  A+ELPLPVFGE+EY
Sbjct: 61  QAEKLRSEWVVRIDGKARLRPAGTENPELPTGQIEIYINEIEVLGPADELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+ LH+NI+ R  I++SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRREKLHQNIMTRGAIVDSMRKRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD+   +E V+ GVFEEF+ G  V+ N+ RI + +++R+YGTDKPDLRNP++M 
Sbjct: 241 MSFVEQDDVFAAVEPVVTGVFEEFAKGKPVTKNWPRIPFAESLRKYGTDKPDLRNPLLMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF  S F+VF+++L  +   +VWAIP   GGG+RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSQHFRGSGFKVFARMLE-DSKNQVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G   G GP+A ++    TEAIR +L ++ GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WR--EGGE--GAGPLANNIGPERTEAIRQQLGLKAGDAAFFVAGDPAKFWKFAGLARTKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + FE  WI+DFP YE+NE+EKK+DF+HNPF+MPQGG+++L   D L+IKAF
Sbjct: 415 GEELNVIDKDRFELAWIVDFPMYEYNEDEKKVDFSHNPFSMPQGGLDALNNQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  +  V  RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGENDVVERFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DR+VMLL G  N+RE+SLFPM+Q   DLLMG+PS V+ +QLREL +R+
Sbjct: 535 AGVDRVVMLLCGTTNLREISLFPMNQRAEDLLMGAPSDVTPKQLRELHIRL 585


>gi|192291824|ref|YP_001992429.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|238692580|sp|B3Q9Q1|SYD_RHOPT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|192285573|gb|ACF01954.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 591

 Score =  777 bits (2006), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/591 (61%), Positives = 454/591 (76%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  S +   VRLSGW HR+R HGG++F+D+RDHYG+TQ VA+PDS  F+
Sbjct: 1   MHRYRTHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R+EWV+ IDG V  R   T N ++ TG +E+   +IE+L  A ELPLPVFGE+EY
Sbjct: 61  DAEKLRAEWVVRIDGKVRRRPEGTDNPDLPTGAVEVFVTEIEVLGPAGELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ LH+NI+ R  I++SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDVRLRYRFLDLRREKLHQNIMTRGAIVDSMRRRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV QDDI   ME V+ GVFEEF+ G  V+  + RI + D++R+YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQDDIFAAMEPVITGVFEEFAKGKRVTKGWPRIAFADSMRKYGTDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L      +VWAIP   GGG+RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLEEQRN-QVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G   G GP+A ++    TEAIR  L ++ GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WR--EGGE--GAGPLANNIGPERTEAIRTALGLKAGDAAFFVAGDPSKFVKFAGLARTKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F   W++DFP YE+NE++KK+DF+HNPF+MPQGGME+L   D L+IKAF
Sbjct: 415 GEELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMEALTSQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS VS +QLREL +R+
Sbjct: 535 AGVDRIVMLLCGTTNLREISLFPMNQRAEDLLMGAPSEVSPKQLRELHIRL 585


>gi|39936106|ref|NP_948382.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|62287570|sp|Q6N5D6|SYD_RHOPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|39649960|emb|CAE28484.1| aspartate-tRNA ligase [Rhodopseudomonas palustris CGA009]
          Length = 591

 Score =  776 bits (2005), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/591 (61%), Positives = 454/591 (76%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  S +   VRLSGW HR+R HGG++F+D+RDHYG+TQ VA+PDS  F+
Sbjct: 1   MHRYRTHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R+EWV+ IDG V  R   T N ++ TG +E+   +IE+L  A ELPLPVFGE+EY
Sbjct: 61  DAEKLRAEWVVRIDGKVRRRPEGTDNPDLPTGAVEVFVTEIEVLGPAGELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ LH+NI+ R  I++SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDVRLRYRFLDLRREKLHQNIMTRGAIVDSMRRRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV QDDI   ME V+ GVFEEF+ G  V+  + RI + D++R+YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQDDIFAAMEPVITGVFEEFAKGKRVTKGWPRIAFADSMRKYGTDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L      +VWAIP   GGG+RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLEEQRN-QVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G   G GP+A ++    TEAIR  L ++ GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WR--EGGE--GAGPLANNIGPERTEAIRAALGLKAGDAAFFVAGDPSKFVKFAGLARTKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F   W++DFP YE+NE++KK+DF+HNPF+MPQGGME+L   D L+IKAF
Sbjct: 415 GEELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMEALTSQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS VS +QLREL +R+
Sbjct: 535 AGVDRIVMLLCGTTNLREISLFPMNQRAEDLLMGAPSEVSPKQLRELHIRL 585


>gi|90423838|ref|YP_532208.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|123395033|sp|Q215P7|SYD_RHOPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|90105852|gb|ABD87889.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 590

 Score =  775 bits (2001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/591 (61%), Positives = 457/591 (77%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  SD+   VR+SGW HR+R HGG++F+D+RDHYG+TQ VA+PDS  F+
Sbjct: 1   MHRYRSHTCGALRESDIDQTVRVSGWCHRIRDHGGLLFIDLRDHYGLTQCVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R+EWV+ IDG V  R   T N ++ TGQ+E+   +IE+L  A ELPLPVFGE+EY
Sbjct: 61  DAEKLRAEWVVRIDGKVRRRPEGTDNNDLPTGQVEIFITEIEVLGPAGELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+ LH+NI+ R  I++SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRREKLHQNIMTRGAIVDSMRKRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGRFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+ QDD+   ME V+ GVFE+F+ G  V+ ++ RI Y D++++YGTDKPDLRNPI M 
Sbjct: 241 MSFITQDDVFAAMEPVITGVFEDFAKGKPVTKSWPRIAYADSLKKYGTDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+EHF  S F+VF+++L      +VWAIP   GGG+RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 NVSEHFRGSGFKVFARMLEEERN-QVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G   G GP+A ++    T AIR +L ++ GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WR--EGGE--GAGPLANNIGPERTAAIREQLGLKAGDAAFFVAGDPSKFVRFAGLARTRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++   FE  WI+DFP YE+NE++KK+DF+HNPF+MPQGGM++L   D L+IKAF
Sbjct: 415 GEELNLVDKERFELAWIVDFPMYEYNEDDKKVDFSHNPFSMPQGGMDALLNQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNGFEIASGGIRNH  E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGFEIASGGIRNHRPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS V+ +QLREL +R+
Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSDVTPKQLRELHIRL 585


>gi|316933726|ref|YP_004108708.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315601440|gb|ADU43975.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 591

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/591 (61%), Positives = 454/591 (76%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  S +   VRLSGW HR+R HGG++F+D+RDHYGITQ VA+PDS  F+
Sbjct: 1   MHRYRTHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGITQCVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R+EWV+ +DG V  R   T N ++ TG +E+   +IE+L  A ELPLPVFGE+EY
Sbjct: 61  DAEKLRAEWVVRMDGRVRRRPEGTENPDLPTGAVEVFVTEIEVLGPAGELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ LH+NI+ R  I++SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDVRLRYRFLDLRREKLHQNIMTRGAIVDSMRRRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+ Q+D+   ME V+ GVFEEF+ G  V+  + RI + D++R+YGTDKPDLRNPI M 
Sbjct: 241 MSFITQEDVFAAMEPVITGVFEEFAKGKRVTKGWPRIAFADSMRKYGTDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L      +VWAIP   GGG+RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLEEERN-QVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G   G GP+A ++    TEAIR  L ++ GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WR--EGGE--GAGPLANNIGPERTEAIRAALGLKAGDAAFFVAGDPSKFVKFAGLARTKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F   W++DFP YE+NE++KK+DF+HNPF+MPQGGME+L   D L+IKAF
Sbjct: 415 GEELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMEALTSQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGEQEVIDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS VS +QLREL +R+
Sbjct: 535 AGVDRIVMLLCGTTNLREISLFPMNQRAEDLLMGAPSEVSPKQLRELHIRL 585


>gi|115525278|ref|YP_782189.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|122295642|sp|Q07LH5|SYD_RHOP5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|115519225|gb|ABJ07209.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 590

 Score =  772 bits (1994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/591 (61%), Positives = 458/591 (77%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  S +   VR+SGW HR+R HGG++F+D+RDHYG+TQ VA+PDS  F+
Sbjct: 1   MHRYRSHTCGALRESHIDQTVRVSGWCHRIRDHGGLLFIDLRDHYGLTQCVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R+EWV+ IDG V  R   T NA++ TGQ+E+   +IE+L  A ELPLPVFGE+EY
Sbjct: 61  DAEKLRAEWVVKIDGKVRRRPEGTDNADLPTGQVEIFITEIEVLGPAGELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+ LH+NI+ R  I++SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRREKLHQNIMTRGAIVDSMRKRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGRFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+ Q+D+   ME V+ GVFEEF+ G  V++ + RI + +A+++YG+DKPDLRNPI M 
Sbjct: 241 MSFITQEDVFAAMEPVITGVFEEFAKGKRVNSVWPRIPFAEAMQKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L   P  +VWAIP K GGG+RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLE-EPRNQVWAIPGK-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    GN  G GP+A ++    TEAIR+ L +  GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WR---EGN-EGAGPLANNIGPERTEAIRIALGLGAGDAAFFVAGDPAKFVRFAGLARTRV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++   F   W++DFP YE+NE++KK+DF+HNPF+MPQGGME+L   D L+IKAF
Sbjct: 415 GEELNLVDKEQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMEALVTQDPLNIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNGFEIASGGIRNH  E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGFEIASGGIRNHRPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS V+ +QLREL +R+
Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSEVTPKQLRELHIRL 585


>gi|86749616|ref|YP_486112.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|123292659|sp|Q2IX59|SYD_RHOP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|86572644|gb|ABD07201.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 590

 Score =  769 bits (1987), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/591 (60%), Positives = 458/591 (77%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  SD+   VR+SGW HR+R HGG++F+D+RDHYG+TQ VA+PDS  F+
Sbjct: 1   MHRYRTHTCGALRDSDIDQTVRVSGWCHRIRDHGGLLFIDLRDHYGLTQCVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R+EWV+ IDG V  R   T N ++ TG++E+   +IE+L  A ELPLPVFGE++Y
Sbjct: 61  DAEKLRAEWVVRIDGRVRRRPEGTDNDDLPTGKVEIFITEIEVLGPAGELPLPVFGEQDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ LH+NI+ R  I+++MR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDVRLRYRFLDLRREKLHQNIMTRGAIVDAMRKRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV QDD+   ME V+ GVFE+F+ G  V+ ++ RI Y +++R+YGTDKPDLRNP+ M 
Sbjct: 241 MSFVTQDDVFAAMEPVITGVFEDFAKGKPVTKSWPRIPYFESLRKYGTDKPDLRNPLEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L      +VWAIP   GGG+RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLEEERN-QVWAIPGP-GGGSRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    GN  G GP+A ++    TEAIRV L ++ GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WR---EGN-EGAGPLANNIGPERTEAIRVALGLKAGDAAFFVAGDPAKFVKFAGLARTKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F   W++DFP YE+NE++KK+DF+HNPF+MPQGGM++L   D L+IKAF
Sbjct: 415 GEELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMDALTSQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGEQEVIDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS V+ +QLREL +R+
Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSQVAPKQLRELHIRL 585


>gi|332185155|ref|ZP_08386904.1| aspartyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332014879|gb|EGI56935.1| aspartyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 604

 Score =  753 bits (1943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/600 (60%), Positives = 444/600 (74%), Gaps = 10/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C  L    VG  VRLSGWVHR R HGG++F+D+RDHYGITQ+VA+ D+    
Sbjct: 1   MHAYRTHTCAALTAEAVGQTVRLSGWVHRKRDHGGVLFVDLRDHYGITQIVADSDTPALA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I ++VR E V+ IDG+V +RSA TIN N+ TG+IE+ A+   +LS AEELP+PV GE+EY
Sbjct: 61  ILEAVRVESVVTIDGVVKARSAGTINPNLATGEIEIFAKGATVLSAAEELPMPVAGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YRFLDLRR+TLH NIV+RT++I  MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLRYRFLDLRRETLHANIVRRTQVIADMRRRMETAGFTEYSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+++  TME V+ G+FE+F++G TV+    F RI Y +++ +YG DKPDLRNP+I
Sbjct: 241 MSFVTQEEVWETMEPVIGGIFEKFADGRTVTPIGQFPRIPYSESMLKYGNDKPDLRNPLI 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLA 357
           + +V+ HF  S F +F KI  V  G  V AIPA G    +R F D MNEWAR++G  GL 
Sbjct: 301 ITDVSAHFTTSGFGLFEKI--VGSGGVVRAIPAPGTAEKSRKFFDEMNEWARAEGHAGLG 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  +  E G     GP+AK+      EAI   L +   D  FF AG        A  AR
Sbjct: 359 YVTRKGGEFG-----GPIAKNHGTEGMEAIYAALGLGPDDGLFFAAGKVEAATKLAGLAR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A++LG+I    F  CWI+DFPFYEW+E+EKK++FAHNPF+MPQGGME+L   D LS+
Sbjct: 414 TRVAEQLGLIEEGAFRLCWIVDFPFYEWDEDEKKVEFAHNPFSMPQGGMEALTSADPLSL 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA+QYDLVCNGFEIASG IRN   E+M+ AF  VG+SK  VE RFGGLYRAFQ G PPHG
Sbjct: 474 KAYQYDLVCNGFEIASGSIRNQSPELMVAAFEKVGLSKADVEERFGGLYRAFQYGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+AAG+DRIVML+ GA+N+RE+SLFPM+Q   DLLMG+PS +S +Q+REL LR    PKK
Sbjct: 534 GMAAGVDRIVMLICGAQNLREISLFPMNQRAEDLLMGAPSLLSAKQMRELALRSTAEPKK 593


>gi|154253740|ref|YP_001414564.1| aspartyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|171769685|sp|A7HYC4|SYD_PARL1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|154157690|gb|ABS64907.1| aspartyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 607

 Score =  747 bits (1929), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/600 (58%), Positives = 458/600 (76%), Gaps = 10/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CF 59
           M  +R+H+ G+L  S VG  VRL+GWVHR R HGG++F+D+RD+YG+TQ+V +PD A  F
Sbjct: 1   MSSFRSHTSGELRKSHVGETVRLAGWVHRKRDHGGLLFIDLRDNYGLTQLVFDPDRAEAF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
            +A+ +R+E+V+ I+G V++RSAETINAN+ TG IE++   +E+LS A++LPLPVFGE +
Sbjct: 61  ALAEKLRAEYVVAIEGKVVARSAETINANLPTGDIEIAVSSMEVLSEAQDLPLPVFGEPD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           YPE IR  YRFLDLRR+TLH+NI+ R++II  +R RM    F E  TPILTASSPEGARD
Sbjct: 121 YPEDIRLTYRFLDLRRETLHRNILLRSKIIADIRRRMTEVGFNEFQTPILTASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRMHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPII 298
           EMSFV QDD+   +E VL G+FE+F+ G  VS+  F RI Y +AIR+YG+DKPDLRNPI+
Sbjct: 241 EMSFVTQDDVFAAIEPVLHGLFEKFAEGKKVSSYPFTRIPYAEAIRKYGSDKPDLRNPIV 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M +VT+HF  S F+VF+ ++  +   EVWAIPA  GGGNRAFCDRMN WA+ +GQPGL Y
Sbjct: 301 MESVTDHFRGSGFKVFAGLIEKDSKVEVWAIPAP-GGGNRAFCDRMNSWAQGEGQPGLGY 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IF+R +E G + G GPVAK++    TEAIR +L ++ GD+ FF+AG P K  SFA  AR 
Sbjct: 360 IFFR-EEGGALEGAGPVAKNIGPERTEAIRTQLGLKAGDAVFFVAGVPAKTASFAGLART 418

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL------KGN 472
            +  ELG+I  + F+FCWI+DFP +EWNE+EKKIDF+HNPF+MP   ++          +
Sbjct: 419 RVGTELGLIEEDIFKFCWIVDFPMFEWNEDEKKIDFSHNPFSMPNYPLDKFLKLDKDNAD 478

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           ++L + AFQYD+VCNG E++SG IRNH  +VM +AF   G  K VVE +FGG+  AF+ G
Sbjct: 479 EILGMTAFQYDIVCNGVELSSGAIRNHKPDVMYKAFEIAGYDKSVVETKFGGMLNAFKYG 538

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG+A GIDR+VMLL G +N+REV++FPM+Q   DLLM +PS V  +QL+EL +R+V
Sbjct: 539 APPHGGLAPGIDRMVMLLAGVENLREVTMFPMNQQAQDLLMQAPSEVEPKQLKELHIRVV 598


>gi|326388938|ref|ZP_08210520.1| aspartyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326206538|gb|EGD57373.1| aspartyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 593

 Score =  739 bits (1909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/599 (59%), Positives = 448/599 (74%), Gaps = 10/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CG L    VG  VRLSGWVHR R HGG++F+D+RDHYGITQ+VA+ DS    
Sbjct: 1   MHPYRSHTCGALSREHVGQNVRLSGWVHRKRDHGGVLFVDLRDHYGITQIVADTDSPALA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + +S+R E V+ I+G V +R+  T+NAN+ TG IE+ A+   +L+ AEELPLPV GE+EY
Sbjct: 61  LLESLRVESVVTIEGNVKARADATVNANLSTGAIEVYARGATVLAAAEELPLPVAGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YRFLDLRR+TLH NIVKRT+II++MR +M    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLRYRFLDLRRETLHANIVKRTKIISAMRRKMEGVGFTEYSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHGGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q++I  TME V+  +FE+F+ G  V+   +F RI YD+A+ +YG+DKPDLRNP+I
Sbjct: 241 MSFVTQEEIWETMEPVIGSIFEDFAEGQAVTPIGSFPRIPYDEAMLKYGSDKPDLRNPLI 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357
           + +V+ HF  S F +F KI  V  G  V AIPA G    +R F D MNEWAR++G  GL 
Sbjct: 301 ITDVSAHFTQSGFGLFEKI--VGGGGVVRAIPAPGTADKSRKFFDEMNEWARAEGYAGLG 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  +  E G     GP+AK+  +   E I   L +   D  FF AG   +    A  AR
Sbjct: 359 YVTRKGGEFG-----GPIAKNHGVEGMEKIYAELGLGADDGLFFAAGKVDQAAKLAGVAR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           N + ++LG+I    F  CWI+DFPFYEW+E+EKK++F+HNPF+MPQGG+++L   D L+I
Sbjct: 414 NRVGEQLGLIEQGAFRLCWIVDFPFYEWDEDEKKVEFSHNPFSMPQGGIDALNNADPLTI 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KAFQYDLVCNG+EIASG IRN   E M++AF  VG++K  VE RFGGLYRAFQ G PPHG
Sbjct: 474 KAFQYDLVCNGYEIASGSIRNQSPETMVRAFEIVGLTKADVEERFGGLYRAFQYGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+AAG+DRIVMLL GA+N+RE+SLFPM+Q   DLLMG+P+ VS++QLREL +R+VE  K
Sbjct: 534 GMAAGVDRIVMLLCGAQNLREISLFPMNQRAEDLLMGAPAPVSLKQLRELSIRVVEPAK 592


>gi|87199359|ref|YP_496616.1| aspartyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
 gi|97196761|sp|Q2G8P1|SYD_NOVAD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|87135040|gb|ABD25782.1| aspartyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 593

 Score =  739 bits (1909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/599 (59%), Positives = 447/599 (74%), Gaps = 10/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CG L   DVG  VRLSGWVHR R HGG++F+D+RDHYG+TQ+VA+ DS    
Sbjct: 1   MHLYRSHTCGALSRGDVGQTVRLSGWVHRKRDHGGVLFVDLRDHYGMTQIVADADSPALP 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I +++R E V+ IDG V +RS  T+NAN+ TG+IE+ A+   +LS AEELP+PV GE+EY
Sbjct: 61  ILEALRVESVVTIDGEVKARSEGTVNANLSTGEIEVFARVATVLSAAEELPMPVAGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YRFLDLRR+TLH NIVKRT++I+ MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLRYRFLDLRRETLHANIVKRTKVISDMRRRMEGAGFTEYSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+++  TME V+ GVFE F++G  V+   +F RI Y +A+ +YG+DKPDLRNPII
Sbjct: 241 MSFVTQEEVWETMEPVIGGVFEAFADGRKVTPIGSFPRIPYAEAMLKYGSDKPDLRNPII 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357
           + +V+E F  S F +F KI  V  G  V  IPA      +R F D MN+WAR++G  GL 
Sbjct: 301 ISDVSEEFAQSGFGLFEKI--VGTGGVVRLIPAPNTADKSRKFFDEMNDWARAEGHAGLG 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  +  E G     GP+AK+       A+  RL +   D CFF AG   +    A  AR
Sbjct: 359 YVTRKQGEFG-----GPIAKNHGADKMAALFDRLGLGPDDGCFFAAGKAEQAAKLAGAAR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A +LG+I+ + FE CWI+DFPFYEW+EE KK++F+HNPF+MPQGG+++L   D L+I
Sbjct: 414 TRVADQLGLIDKDRFELCWIVDFPFYEWDEENKKVEFSHNPFSMPQGGLDALNTQDPLTI 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            AFQYDLVCNGFEIASG IRN   E M++AF  VG+SK  VE RFGGLYRAFQ G PPHG
Sbjct: 474 NAFQYDLVCNGFEIASGSIRNQSPETMVKAFEIVGLSKADVEERFGGLYRAFQYGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+AAG+DRIVML+ GA+N+RE++LFPM+Q   DLLMG+PS  +++QLREL +R+VE  K
Sbjct: 534 GMAAGVDRIVMLICGAQNLREITLFPMNQRAEDLLMGAPSPAALKQLRELNIRVVEQTK 592


>gi|332559281|ref|ZP_08413603.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332276993|gb|EGJ22308.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 591

 Score =  731 bits (1887), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/592 (58%), Positives = 442/592 (74%), Gaps = 4/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  + VG  VRLSGWVHRVR HGG++FLD+RDHYGITQV+A+ DS  F 
Sbjct: 1   MHAYRSHTCTELNAAHVGQEVRLSGWVHRVRDHGGVLFLDLRDHYGITQVIADADSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             ++VR+EWV+ I+G V +R A  +N  + TG+IE+ A  + +L  A+ELPLPVFGE +Y
Sbjct: 61  ELETVRAEWVIRIEGRVKARDASLVNPKLATGEIEVYATGMSVLGAADELPLPVFGETDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R  YRFLDLRR+ LH+N++ R+ ++ S+R RM    F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLTYRFLDLRREKLHQNMMLRSNVVRSLRNRMWGAGFNEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   ++ V++G+FEEF +G  V  ++ RI Y DA+  YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVFAAVQPVMQGLFEEFGHGKRVDADWPRIAYRDAMLWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L  N G E+ AIPA   GG+R FCDRMN +A+SQG PG+ YIF
Sbjct: 301 VVSEHFAGSGFAIFAKLLE-NEGTEIRAIPAP-TGGSRKFCDRMNAFAQSQGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  + G +   GP+AK++    TEAIR +L + +GD+ FF+ G P  F + A  AR  I
Sbjct: 359 WRKGDDGAMEAAGPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPETFEAVAGRARTEI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+   NCF+F WI+DFP YE  ++E KIDF+HNPF+MPQGGME+L+G D L + A+
Sbjct: 419 GRELGLTEENCFKFAWIVDFPMYE-KDDEGKIDFSHNPFSMPQGGMEALEG-DPLKVHAY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SGGIRNH  E+M +AF   G  KE VE RFGG+ +AF+ G PPHGG A
Sbjct: 477 QYDLACNGYELISGGIRNHKPEIMFKAFELAGYPKEEVEKRFGGMVKAFRYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDRIVMLL    N+REV +FPM+Q   DLLMG+PS  + EQLREL LR+V
Sbjct: 537 AGIDRIVMLLADEANIREVIMFPMNQRAEDLLMGAPSEPTNEQLRELRLRVV 588


>gi|221640277|ref|YP_002526539.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254781748|sp|B9KME7|SYD_RHOSK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|221161058|gb|ACM02038.1| Aspartyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 591

 Score =  731 bits (1886), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/592 (58%), Positives = 442/592 (74%), Gaps = 4/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  + VG  VRLSGWVHRVR HGG++FLD+RDHYGITQV+A+ DS  F 
Sbjct: 1   MHAYRSHTCTELNAAHVGQEVRLSGWVHRVRDHGGVLFLDLRDHYGITQVIADADSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             ++VR+EWV+ I+G V +R A  +N  + TG+IE+ A  + +L  A+ELPLPVFGE +Y
Sbjct: 61  ELETVRAEWVIRIEGRVKARDASLVNPKLATGEIEVYATGMSVLGAADELPLPVFGETDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R  YRFLDLRR+ LH+N++ R+ ++ S+R RM    F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLTYRFLDLRREKLHQNMMLRSNVVRSLRNRMWGAGFNEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   ++ V++G+FEEF +G  V  ++ RI Y DA+  YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVFAAVQPVIQGLFEEFGHGKRVEADWPRIAYRDAMLWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L  N G E+ AIPA   GG+R FCDRMN +A+SQG PG+ YIF
Sbjct: 301 VVSEHFAGSGFAIFAKLLE-NEGTEIRAIPAP-TGGSRKFCDRMNAFAQSQGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  + G +   GP+AK++    TEAIR +L + +GD+ FF+ G P  F + A  AR  I
Sbjct: 359 WRKGDDGAMEAAGPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPETFEAVAGRARTEI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+   NCF+F WI+DFP YE  ++E KIDF+HNPF+MPQGGME+L+G D L + A+
Sbjct: 419 GRELGLTEENCFKFAWIVDFPMYE-KDDEGKIDFSHNPFSMPQGGMEALEG-DPLKVHAY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SGGIRNH  E+M +AF   G  KE VE RFGG+ +AF+ G PPHGG A
Sbjct: 477 QYDLACNGYELISGGIRNHKPEIMFKAFELAGYPKEEVEKRFGGMVKAFRYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDRIVMLL    N+REV +FPM+Q   DLLMG+PS  + EQLREL LR+V
Sbjct: 537 AGIDRIVMLLADEANIREVIMFPMNQRAEDLLMGAPSEPTNEQLRELRLRVV 588


>gi|77464390|ref|YP_353894.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|126463232|ref|YP_001044346.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|97196839|sp|Q3IZP1|SYD_RHOS4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225380|sp|A3PMK8|SYD_RHOS1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|77388808|gb|ABA79993.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|126104896|gb|ABN77574.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 591

 Score =  731 bits (1886), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/592 (58%), Positives = 442/592 (74%), Gaps = 4/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  + VG  VRLSGWVHRVR HGG++FLD+RDHYGITQV+A+ DS  F 
Sbjct: 1   MHAYRSHTCTELNAAHVGQEVRLSGWVHRVRDHGGVLFLDLRDHYGITQVIADADSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             ++VR+EWV+ I+G V +R A  +N  + TG+IE+ A  + +L  A+ELPLPVFGE +Y
Sbjct: 61  ELETVRAEWVIRIEGRVKARDASLVNPKLATGEIEVYATGMSVLGAADELPLPVFGETDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R  YRFLDLRR+ LH+N++ R+ ++ S+R RM    F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLTYRFLDLRREKLHQNMMLRSNVVRSLRNRMWGAGFNEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   ++ V++G+FEEF +G  V  ++ RI Y DA+  YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVFAAVQPVIQGLFEEFGHGKRVDADWPRIAYRDAMLWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L  N G E+ AIPA   GG+R FCDRMN +A+SQG PG+ YIF
Sbjct: 301 VVSEHFAGSGFAIFAKLLE-NEGTEIRAIPAP-TGGSRKFCDRMNAFAQSQGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  + G +   GP+AK++    TEAIR +L + +GD+ FF+ G P  F + A  AR  I
Sbjct: 359 WRKGDDGAMEAAGPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPETFEAVAGRARTEI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+   NCF+F WI+DFP YE  ++E KIDF+HNPF+MPQGGME+L+G D L + A+
Sbjct: 419 GRELGLTEENCFKFAWIVDFPMYE-KDDEGKIDFSHNPFSMPQGGMEALEG-DPLKVHAY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SGGIRNH  E+M +AF   G  KE VE RFGG+ +AF+ G PPHGG A
Sbjct: 477 QYDLACNGYELISGGIRNHKPEIMFKAFELAGYPKEEVEKRFGGMVKAFRYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDRIVMLL    N+REV +FPM+Q   DLLMG+PS  + EQLREL LR+V
Sbjct: 537 AGIDRIVMLLADEANIREVIMFPMNQRAEDLLMGAPSEPTNEQLRELRLRVV 588


>gi|182678379|ref|YP_001832525.1| aspartyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|238691242|sp|B2IKA4|SYD_BEII9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|182634262|gb|ACB95036.1| aspartyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 597

 Score =  728 bits (1878), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/600 (57%), Positives = 435/600 (72%), Gaps = 7/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CGDL  +      RLSGW HR+R HGG++F+D+RDHYGITQ V +PDS  F 
Sbjct: 1   MHRYRTHTCGDLREAQADETTRLSGWCHRIRDHGGVLFIDLRDHYGITQCVVDPDSKAFP 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSEWV+ IDGLV  R + T N  + TG IE+   +IE+L  A ELP+PVFG+ +Y
Sbjct: 61  LAEKLRSEWVVRIDGLVRKRPSGTENPEMPTGFIEIYVTEIEVLGAAAELPMPVFGDIDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+ LHKNI+ R ++I+S+R RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRREKLHKNIMLRGQVIDSLRRRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHAGKFYALPQAPQQYKQLLMMAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+ Q+D+   ME V+RG FEEF NG  V+  F RI Y +A+ +YG+DKPDLRNP+++ 
Sbjct: 241 MSFITQEDVFAAMEPVIRGAFEEFGNGQPVTQTFPRIPYAEAMLKYGSDKPDLRNPLVIA 300

Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           +VT+ F   +  F  F  +  +  G  V AIPA G     R+F D++N+WA+S+G  GL 
Sbjct: 301 DVTDLFARDDVSFNAFKNV--IKKGGVVRAIPATGAASQPRSFFDKLNDWAKSEGAAGLG 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+ +   +   V G GP+AK L      AI  R D++ GD+ FF      K    A  AR
Sbjct: 359 YVIFEGSDEAPV-GKGPIAKFLPAEVQAAIVTRADLKAGDAVFFACDIEEKAAKLAGAAR 417

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             I  ELG+     FE CWI+DFP YEWNE++K +DF+HNPF+MPQGG+E+L+  D L+I
Sbjct: 418 LRIGHELGLSKTGVFELCWIVDFPMYEWNEDDKTVDFSHNPFSMPQGGLEALQTQDPLTI 477

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KAFQYD+ CNG+EIASGGIRNH  E M++AF   G  +E V  RFGG+YRAFQ G PPHG
Sbjct: 478 KAFQYDIACNGYEIASGGIRNHRPEAMVKAFEIAGYGEETVVERFGGMYRAFQYGAPPHG 537

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPK 596
           G+AAG+DRI+MLL G +N+RE+SLFPM+Q   DLLMG+PS  + +QLREL +R+ +  PK
Sbjct: 538 GMAAGVDRIIMLLAGVQNLREISLFPMNQKAEDLLMGAPSEATTKQLRELHIRLNLPEPK 597


>gi|83858510|ref|ZP_00952032.1| aspartyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83853333|gb|EAP91185.1| aspartyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 605

 Score =  727 bits (1877), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/599 (57%), Positives = 444/599 (74%), Gaps = 9/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  + +G   RLSGW+HR R HGG++F+D+RDHYG+TQ V  PD+  F 
Sbjct: 1   MHAYRTHTCGQLRKAQMGETARLSGWIHRKRDHGGLLFVDLRDHYGLTQCVLEPDNPNFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R+E V+ + G V++R+ +TIN N+ TG+IEL  + + + S AEELPLPVFGE ++
Sbjct: 61  TLERMRAESVVTVTGKVVARTEDTINPNLPTGEIELLVEDLVVQSAAEELPLPVFGEPDW 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R K+R++DLRR++LHK IV R++II+S+R RM+ E F E  TPILTASSPEGARDF
Sbjct: 121 SEEVRLKHRYIDLRRESLHKRIVLRSKIIDSLRRRMVDEGFTEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFDRYFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 181 LVPSRLHPGHFYALPQAPQQFKQLIMVSGFDRYFQIAPCFRDEDARADRAPGEFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV QD++   +E VL GVF EF++G  V    F RI Y +A+R+YG+DKPDLRNPI M
Sbjct: 241 MSFVTQDEVFGVIEPVLAGVFNEFADGREVPEGAFPRIPYAEAMRKYGSDKPDLRNPIEM 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             VTEHF  S F+VF+ ++  NP  EVWAIPA   GG+RAFCDRMN WA+ +GQPGL YI
Sbjct: 301 EAVTEHFAGSGFKVFAGMIEKNPKVEVWAIPAP-KGGSRAFCDRMNSWAQKEGQPGLGYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FWR +E+G + G GP+AK++    T+AIR +L ++ GD+ FF AG+P  F SFA  AR+ 
Sbjct: 360 FWR-EENGALEGAGPIAKNIGPERTDAIRTQLGLEAGDAVFFAAGEPSAFASFAGKARDV 418

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME---SLKGND--- 473
           + +EL +   N F FCWI+DFP YEW++E KK++F+HNPF+MPQ   E   +L  +D   
Sbjct: 419 VGRELDLFEKNVFRFCWIVDFPMYEWDDENKKVEFSHNPFSMPQMDPEAFMALSKDDHET 478

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           LL +KA+QYD+VCNG E++SG IRNH  +VML+AF   G   +VVE  FGG+  AF+ G 
Sbjct: 479 LLGLKAWQYDIVCNGIELSSGAIRNHRPDVMLKAFEFAGYGADVVEEAFGGMLNAFRYGA 538

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           PPHGGIA G+DRIVM+L   +N+REV +FP  Q   DL+M +P+   + QLREL LR V
Sbjct: 539 PPHGGIAPGVDRIVMMLADQENLREVVMFPKDQQARDLMMNAPAPAEMRQLRELHLRTV 597


>gi|218461682|ref|ZP_03501773.1| aspartyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 499

 Score =  726 bits (1874), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/499 (65%), Positives = 412/499 (82%), Gaps = 2/499 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +R+ +T+N  + TG+IEL AQ+IE+LS A+ELPLPVFGE +Y
Sbjct: 61  LAETVRGEWVIRIDGLVKARTEDTVNKTMATGEIELYAQEIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLH+NIVKRT +I++MR  M A  F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHRNIVKRTLVISAMRREMGAVGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ NTM  ++  +FEEF+ G  V+  + RI YD+AIR+YGTDKPDLRNPI+M 
Sbjct: 241 MSFVTQEDVWNTMGPLMTQIFEEFAEGKPVTKEWPRIPYDEAIRKYGTDKPDLRNPIVME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VT+HF  S F+VF+ +++ NP  ++WAIPAK  GG+RAFCDRMN WA+SQGQPGL YIF
Sbjct: 301 AVTDHFAGSGFKVFAGMIASNPKVQIWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E+  + G GP+AK++    TEAIR +L + DGD+CFF+AG+P KF  FA +AR   
Sbjct: 360 WR-SENDKLEGAGPLAKNIGEERTEAIRTQLGLGDGDACFFVAGEPEKFYKFAGEARTKA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE CWI+DFPF+EWN+EEKK+DFAHNPF+MPQGG+++L+  D L+IKAF
Sbjct: 419 GEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQGGLDALQNQDPLTIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNH 499
           QYD VCNGFEIASG IRN 
Sbjct: 479 QYDAVCNGFEIASGSIRNQ 497


>gi|114569808|ref|YP_756488.1| aspartyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|122316203|sp|Q0AQ87|SYD_MARMM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|114340270|gb|ABI65550.1| aspartyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 605

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/606 (55%), Positives = 449/606 (74%), Gaps = 11/606 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  + VG   R+SGW+HR R HGG++F+D+RDHYG+TQVV  P+S  F 
Sbjct: 1   MHAYRSHTCAELRKAHVGQTARISGWIHRKRDHGGLLFIDLRDHYGLTQVVLEPESPHFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R E V+ + G V++RS ET+NAN+ TG+IE+   ++ I S AEELPLPVFGE ++
Sbjct: 61  TLERLRVESVITVTGEVIARSDETVNANLPTGEIEVRLAELAIQSEAEELPLPVFGEPDW 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R K+R++DLRR++LHK IV R++II+S+R RM+ ENF+E  TPILTASSPEGARDF
Sbjct: 121 SEEVRLKHRYIDLRRESLHKRIVLRSKIIDSLRRRMVDENFVEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQQ+KQL+M SGFDRYFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 181 LVPSRVHPGKFYALPQAPQQFKQLIMVSGFDRYFQIAPCFRDEDARADRAPGEFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSF  Q D+ + +E V++G+F+EF++G TV +  F++I Y DA+  YG+DKPDLRNPI M
Sbjct: 241 MSFATQQDVFDVIEPVMKGLFDEFADGRTVPDEPFVQIAYKDAMSWYGSDKPDLRNPIKM 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            + +E F  S F+VF+ +L  NP  +VWAIPAK  GG+RAFCDRMN WA+ +GQPG+ YI
Sbjct: 301 SDASETFRGSGFKVFAGMLERNPKVQVWAIPAK-TGGSRAFCDRMNSWAQKEGQPGMGYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FWR  E G +   GP+AK++    TEA+RV L ++ GD+CFF AGDP +F  FA  AR+ 
Sbjct: 360 FWREAE-GGLEAAGPIAKNIGEERTEALRVELGLEAGDACFFAAGDPREFAGFAGRARDV 418

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-------KGN 472
           +  EL +   + F FCWI+DFP YEW+E+ KKIDF+HNPF+MPQ   +           +
Sbjct: 419 VGAELDLCEKDTFRFCWIVDFPMYEWDEDNKKIDFSHNPFSMPQIDPDDFLKLDADTDAD 478

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            LL++KA+QYD+VCNG E++SG +RNH  +VML+AF+  G     VE  FGG+  AF+ G
Sbjct: 479 TLLALKAYQYDIVCNGVELSSGAVRNHRPDVMLKAFAFAGYDAATVEEEFGGMLNAFRYG 538

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR-I 591
            PPH G+A G+DR++MLL G +N+REV +FP  Q   DL+M +P+ V ++QLREL +R +
Sbjct: 539 APPHAGVAPGVDRMIMLLAGVENLREVVMFPKDQQARDLMMNAPAEVELKQLRELHIRTV 598

Query: 592 VENPKK 597
           V + KK
Sbjct: 599 VPDAKK 604


>gi|254502618|ref|ZP_05114769.1| aspartyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222438689|gb|EEE45368.1| aspartyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 593

 Score =  724 bits (1869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/591 (58%), Positives = 438/591 (74%), Gaps = 3/591 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CGDL +SD G  +RLSGWVHRVR HGG++F+D+RDHYG+TQ V +PDSA F 
Sbjct: 1   MHPYRSHTCGDLRLSDEGQTIRLSGWVHRVRDHGGVLFIDLRDHYGMTQCVVDPDSAAFG 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VRSEW + ID  V  R+ ETIN ++ TG+IE+  + +E+L  A+ELPLPVFGE+EY
Sbjct: 61  LAETVRSEWCIRIDATVKKRTEETINPDLPTGEIEVFIRDMEVLGSAKELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+ LH N++ R+ ++  +R RM A  F E  TPI+TASSPEGARDF
Sbjct: 121 PEEVRLKYRFLDLRREKLHNNMILRSNVVRDIRDRMWAIGFNEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q ++ +T+E V+ GVFE+F N   V+ N+ +I Y D+   YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQQEVFDTIEPVIAGVFEKFGNDRPVNRNWPQISYKDSALWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+ +L   PG E+ AIPA   GG+R FCDRMN++A+ +G PG+ YIF
Sbjct: 301 IVSEHFAGSGFAIFANLLE-QPGTEIRAIPAP-KGGSRKFCDRMNKFAQGEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G++   GP+AK++    TEAIR +L ++ GD+ FF+ G P +F + AA AR  I
Sbjct: 359 WRKAEDGSMEAAGPLAKNIGPERTEAIRQQLGLEVGDAAFFLGGKPKQFQAVAAKARVTI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG  + + FEF WI+DFP YE +EE  +IDF HNPF+MPQGGME+L+G D L +  +
Sbjct: 419 GEELGHTDKDRFEFAWIVDFPIYEKDEETGEIDFEHNPFSMPQGGMEALEG-DPLEVLGW 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG E+ SG IRNH  E+M +AF   G   E V  RFGG+  AFQ G PPHGG A
Sbjct: 478 QYDLSCNGHELVSGAIRNHKPEIMYKAFEIAGYPNEEVNKRFGGMVNAFQYGAPPHGGCA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AGIDRIVMLL    N+REV LFPM+Q   DL+MG+P+     QLREL LR+
Sbjct: 538 AGIDRIVMLLADEANIREVMLFPMNQKAEDLMMGAPNEPDTAQLRELHLRL 588


>gi|114770404|ref|ZP_01447942.1| aspartyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114549241|gb|EAU52124.1| aspartyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 593

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/592 (57%), Positives = 435/592 (73%), Gaps = 3/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M  +RTH+C DL  +DVG  VRLSGWVHRVR HGGI+F+D+RDHYGITQ++A+PDS  F+
Sbjct: 1   MQAFRTHTCSDLNANDVGQSVRLSGWVHRVRDHGGILFIDLRDHYGITQILADPDSPVFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG+V +R+ E +N  + TG++E+    +E+L  +EELPL +F E ++
Sbjct: 61  DLEKVRSEWCIRIDGVVKARAPELVNKKLPTGEVEIFISDMEVLGASEELPLQIFDEPDF 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYRFLDLRR+TLH NI+ R+ +I S+R RM ++ F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLKYRFLDLRRETLHNNIILRSNVIKSIRNRMDSQGFNEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQ++M +GFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQMIMVAGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ NT+E VL+G+FEEF  G ++S N+ +I Y D+   YGTDKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFNTIEPVLKGIFEEFGGGRSISKNWPQISYRDSALWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F +F+K+L  N G EV AIPA   GG+R FCDRMN++A+ +G PG+ YIF
Sbjct: 301 IVSDHFKESGFAIFAKLLE-NEGTEVRAIPAP-KGGSRKFCDRMNKFAQQEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR D+   +   GP+AK++    TEAIR +L +Q GD+ FF+AG P  F   A  AR  I
Sbjct: 359 WR-DQGEGLEAAGPLAKNIGPERTEAIRQQLGLQVGDAAFFLAGKPKAFEGVAGRARTVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL I N + FEF WI+DFP YE + E  KIDF+HNPF+MPQGGM +L   D  +I  +
Sbjct: 418 GEELKITNKDSFEFAWIVDFPMYEKDSETGKIDFSHNPFSMPQGGMAALDAEDPETILGY 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G   E V  RFGG+  AF  G PPHGG A
Sbjct: 478 QYDLACNGYELISGAIRNHNPEIMYKAFEIAGYPNEEVNKRFGGMVNAFTYGAPPHGGCA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDRIVMLL    N+R+V +FPM+Q   DL++G PS VS EQLREL LRI+
Sbjct: 538 AGIDRIVMLLANEDNIRQVIMFPMNQRAEDLMLGGPSEVSNEQLRELNLRIM 589


>gi|16126135|ref|NP_420699.1| aspartyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|24212419|sp|Q9A734|SYD_CAUCR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|13423341|gb|AAK23867.1| aspartyl-tRNA synthetase [Caulobacter crescentus CB15]
          Length = 609

 Score =  721 bits (1862), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/610 (56%), Positives = 443/610 (72%), Gaps = 24/610 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  SD G+ VRLSGW+HR R HGG++F+D+RDHYG+TQ+V +P++  F 
Sbjct: 1   MHAYRTHNCGALRASDTGAAVRLSGWIHRKRDHGGLVFIDLRDHYGLTQLVLHPETPGFN 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + +R+E V+ +DG V++R A  +N N+ TG+IE+    +E+LS A ELPLPVFGE +Y
Sbjct: 61  VVERLRAESVIRVDGEVIARDASVVNPNLPTGEIEIRVSAVEVLSEAAELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR K+R+LDLRR+TLHKNIV R+R+I S+R RM A+ F E  TPILTASSPEGARDF
Sbjct: 121 PEEIRLKHRYLDLRRETLHKNIVLRSRVIQSIRNRMFAQGFNEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++   FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRLHPEKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------------NNFLRICYDDA 282
           MSFV Q+D+   +E V+ GVFEEFSNG  VS                    F R+ Y  +
Sbjct: 240 MSFVTQEDVFAAIEPVMHGVFEEFSNGKPVSPINGTHTFTNDFGQSFEHKGFERLTYAQS 299

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +  YG+DKPDLRNPI M NV+EHF    F +F+KIL  +   +VWAIPA   GG+RAFCD
Sbjct: 300 MAWYGSDKPDLRNPIKMANVSEHFRDGGFGLFAKILGADAKNQVWAIPAP-TGGSRAFCD 358

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
           RMN WA+ +GQPGL Y+FW  D+ G     GP+AK+L    T+A+   L +  GD+ FF+
Sbjct: 359 RMNSWAQGEGQPGLGYVFWSEDQGG---WGGPIAKNLG-EPTQALMESLGLGAGDAAFFV 414

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           AGDP  F  FA  AR  +  EL +++ N F+FCWI+DFP +EWNEEEKK+DF+HNPF+MP
Sbjct: 415 AGDPAVFAKFAGLARTRVGTELKLVDENQFKFCWIVDFPMFEWNEEEKKVDFSHNPFSMP 474

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           QGG+E+L+  D L+I+A+QYD+VCNG+E+ SG IRNH  E+ML+AF+  G   EVVE +F
Sbjct: 475 QGGLEALETQDPLTIRAYQYDIVCNGYELCSGAIRNHKPEIMLKAFATAGYGPEVVEEQF 534

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           GG+  AF+ G PPHGG+A GIDRIVMLL     +REV  FP++Q   DLLM +P+ V  +
Sbjct: 535 GGMLNAFRYGAPPHGGLAPGIDRIVMLLADQVAIREVIAFPLNQQGQDLLMNAPANVLDK 594

Query: 583 QLRELGLRIV 592
           QL+EL +R  
Sbjct: 595 QLKELHIRTA 604


>gi|221234906|ref|YP_002517342.1| aspartyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|220964078|gb|ACL95434.1| aspartyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 612

 Score =  721 bits (1862), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/610 (56%), Positives = 443/610 (72%), Gaps = 24/610 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  SD G+ VRLSGW+HR R HGG++F+D+RDHYG+TQ+V +P++  F 
Sbjct: 4   MHAYRTHNCGALRASDTGAAVRLSGWIHRKRDHGGLVFIDLRDHYGLTQLVLHPETPGFN 63

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + +R+E V+ +DG V++R A  +N N+ TG+IE+    +E+LS A ELPLPVFGE +Y
Sbjct: 64  VVERLRAESVIRVDGEVIARDASVVNPNLPTGEIEIRVSAVEVLSEAAELPLPVFGEPDY 123

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR K+R+LDLRR+TLHKNIV R+R+I S+R RM A+ F E  TPILTASSPEGARDF
Sbjct: 124 PEEIRLKHRYLDLRRETLHKNIVLRSRVIQSIRNRMFAQGFNEFQTPILTASSPEGARDF 183

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++   FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 184 LVPSRLHPEKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDVE 242

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------------NNFLRICYDDA 282
           MSFV Q+D+   +E V+ GVFEEFSNG  VS                    F R+ Y  +
Sbjct: 243 MSFVTQEDVFAAIEPVMHGVFEEFSNGKPVSPINGTHTFTNDFGQSFEHKGFERLTYAQS 302

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +  YG+DKPDLRNPI M NV+EHF    F +F+KIL  +   +VWAIPA   GG+RAFCD
Sbjct: 303 MAWYGSDKPDLRNPIKMANVSEHFRDGGFGLFAKILGADAKNQVWAIPAP-TGGSRAFCD 361

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
           RMN WA+ +GQPGL Y+FW  D+ G     GP+AK+L    T+A+   L +  GD+ FF+
Sbjct: 362 RMNSWAQGEGQPGLGYVFWSEDQGG---WGGPIAKNLG-EPTQALMESLGLGAGDAAFFV 417

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           AGDP  F  FA  AR  +  EL +++ N F+FCWI+DFP +EWNEEEKK+DF+HNPF+MP
Sbjct: 418 AGDPAVFAKFAGLARTRVGTELKLVDENQFKFCWIVDFPMFEWNEEEKKVDFSHNPFSMP 477

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           QGG+E+L+  D L+I+A+QYD+VCNG+E+ SG IRNH  E+ML+AF+  G   EVVE +F
Sbjct: 478 QGGLEALETQDPLTIRAYQYDIVCNGYELCSGAIRNHKPEIMLKAFATAGYGPEVVEEQF 537

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           GG+  AF+ G PPHGG+A GIDRIVMLL     +REV  FP++Q   DLLM +P+ V  +
Sbjct: 538 GGMLNAFRYGAPPHGGLAPGIDRIVMLLADQVAIREVIAFPLNQQGQDLLMNAPANVLDK 597

Query: 583 QLRELGLRIV 592
           QL+EL +R  
Sbjct: 598 QLKELHIRTA 607


>gi|315499999|ref|YP_004088802.1| aspartyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315418011|gb|ADU14651.1| aspartyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 593

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/591 (58%), Positives = 439/591 (74%), Gaps = 7/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  +D G+ VR+SGW+HR R HGG++F+D+RDHYG+TQ+V NPDSA F 
Sbjct: 1   MHSYRTHTCGALRATDAGAEVRVSGWIHRKRDHGGLLFIDLRDHYGLTQLVFNPDSAGFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +RSE V+ +DG V++R   T+N N+ TG IE+    IE+LS A ELPLPVFGE EY
Sbjct: 61  KVERLRSESVIRVDGKVVARDEATVNPNLPTGAIEVVVSDIEVLSEAAELPLPVFGEPEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR K RFLDLRR+TLHKNIV R+R+I S+R RM+A+ F+E  TPILTASSPEGARDF
Sbjct: 121 PEEIRLKNRFLDLRRETLHKNIVLRSRVIQSIRNRMVAQGFLEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRLHAGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+   +E V+ G+F EF  G  VS+  F RI Y ++I +YG+DKPDLRNPI M
Sbjct: 240 MSFVTQEDVFAAIEPVMHGLFTEFGEGKRVSSYPFQRIPYKESIAKYGSDKPDLRNPIEM 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V+EHF    F +F++IL  N    VWAIPA   GG+RAFCDRMN WA+ +GQPGL YI
Sbjct: 300 QDVSEHFRGGGFGLFARILE-NSANAVWAIPAP-KGGSRAFCDRMNSWAQGEGQPGLGYI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FW  D+    A  GP+AK+L    T A+   L +  GD+ FF+AGDP  F  FA  AR  
Sbjct: 358 FWSEDQG---AWGGPIAKNLGNEATTALMTALGLGQGDAAFFVAGDPKIFYKFAGLARTK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +L +++ + F FCWI+DFP +E+NE+EKK+DF+HNPF+MPQG ME+L   D L I A
Sbjct: 415 VGTDLNLVDEDQFRFCWIVDFPMFEYNEDEKKVDFSHNPFSMPQGEMEALLTKDPLDILA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG+E+ SG IRNH  E+ML+AF   G   +VVE++FGG+  AF+ G PPHGG+
Sbjct: 475 YQYDIVCNGYELCSGAIRNHKQEIMLKAFEIAGYGADVVESQFGGMLNAFKYGAPPHGGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           A GIDRIVMLL G   +REV  FP++Q   D++M +PS V+ +QL+EL +R
Sbjct: 535 APGIDRIVMLLAGQTAIREVIAFPLNQQGQDVMMSAPSEVTEKQLKELHIR 585


>gi|146276417|ref|YP_001166576.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|166225381|sp|A4WPF7|SYD_RHOS5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145554658|gb|ABP69271.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 591

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/592 (57%), Positives = 435/592 (73%), Gaps = 4/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L    VG  VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+ DS  F 
Sbjct: 1   MHAYRSHTCAELNAGHVGQEVRLSGWVHRVRDHGGVLFIDLRDHYGITQVIADADSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             ++VR+EWV+ I+G V  R A  +N  + TG+IE+ A  + +L  A+ELP+PVFGE +Y
Sbjct: 61  ELETVRAEWVIRIEGRVKGRDAALVNPKLATGEIEVYATGLTVLGAADELPMPVFGEVDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R  YRFLDLRR+ LH N++ R+ ++ S+R RM    F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLTYRFLDLRREKLHANMMLRSNVVRSLRNRMWDAGFNEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   ++ V+RG+FEEF  G  V  ++ RI Y DA+  YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVFRAVQPVIRGIFEEFGGGRRVDADWPRIAYRDAMLWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L  N G E+ AIPA   GG+R FCDRMN +A+SQG PG+ YIF
Sbjct: 301 VVSEHFRGSGFAIFAKLLE-NEGTEIRAIPAP-TGGSRKFCDRMNAFAQSQGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  + G +   GP+AK++    TEAIR +L + +GD+ FF+ G P  F + A  ARN I
Sbjct: 359 WRKGDDGAMEAAGPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPETFEAVAGRARNEI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+   NCF F WI+DFP YE  ++E K+DF+HNPF+MPQGGM +L+G D L + A+
Sbjct: 419 GRELGLTEENCFRFAWIVDFPMYE-KDDEGKVDFSHNPFSMPQGGMAALEG-DPLKVLAY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SGGIRNH  E+M +AF   G     VE RFGG+ +AF+ G PPHGG A
Sbjct: 477 QYDLACNGYELISGGIRNHKPEIMFKAFELAGYPASEVEKRFGGMVKAFRYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDRIVMLL    N+REV +FPM+Q   DLLMG+PS  + EQLREL LR+V
Sbjct: 537 AGIDRIVMLLADEANIREVIMFPMNQRAEDLLMGAPSEPTNEQLRELRLRVV 588


>gi|94497625|ref|ZP_01304193.1| aspartyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94422842|gb|EAT07875.1| aspartyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 594

 Score =  719 bits (1855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/600 (57%), Positives = 444/600 (74%), Gaps = 10/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L ++D G+ VR+SGWVHR R HG ++F+D+RDHYG+ Q+V   D   F+
Sbjct: 1   MHAYRTHTCGALTIADAGNEVRVSGWVHRKRDHGDLVFIDLRDHYGMVQIVTEVDGPVFQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + +R+E V+ + G V++R+ E +N N+ TG+IE+ A    +LS A +LPLPV GE++Y
Sbjct: 61  VIEGLRAESVVTVTGKVVARATEAVNPNLPTGEIEIRALDAAVLSAAADLPLPVAGEQDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YRFLDLRR+TLH NIVKRT+II+ MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLRYRFLDLRRETLHANIVKRTKIISDMRRRMEGAGFTEYSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+D+ NTME V+  VFE FS+G  V+   +F RI + +A+ +YG+DKPDLRNPII
Sbjct: 241 MSFVTQEDVWNTMEPVIAQVFEAFSDGKPVTPAGSFPRIPHAEAMLKYGSDKPDLRNPII 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357
           + +VT+HF+ S F +F+ +  V+ G  + AIPA G G G+R F D MN WAR +G  GL 
Sbjct: 301 IQDVTDHFIGSGFGIFASL--VDGGARIRAIPAPGAGAGSRKFFDDMNVWARGEGYSGLG 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +    G     GP+AK+     T  +   L +   D  FF AG   +    A  AR
Sbjct: 359 YINIKDGVPG-----GPIAKNHGPEATAKLIEALGLGPNDGVFFAAGKEAQAAKLAGLAR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + ++L +I+ + FE CWI+DFPFYE++E+ K IDFAHNPF+MPQGG+++L+  D L+I
Sbjct: 414 IRVGEQLDLIDKDRFELCWIVDFPFYEYDEDTKSIDFAHNPFSMPQGGLDALENQDPLTI 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            AFQYD+VCNG+EIASG IRN   ++M++AF  VG+SK  VE RFGGLYRAFQ G PPHG
Sbjct: 474 NAFQYDMVCNGYEIASGSIRNQSPDLMVKAFELVGLSKADVEERFGGLYRAFQYGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+AAG+DRIVMLL GA+N+RE++LFPM+Q   DLLMG+PS V  +QLREL +R+VE   K
Sbjct: 534 GMAAGVDRIVMLLCGAQNLREITLFPMNQRAEDLLMGAPSAVEFKQLRELHVRVVEPQAK 593


>gi|302383320|ref|YP_003819143.1| aspartyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193948|gb|ADL01520.1| aspartyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 593

 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/593 (57%), Positives = 440/593 (74%), Gaps = 6/593 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CG L  SD GS VRLSGWVHR R HGG++F+D+RDHYG+TQ+V +P++  FE
Sbjct: 1   MHAYRSHTCGALRSSDAGSNVRLSGWVHRKRDHGGLLFIDLRDHYGLTQLVFHPETPGFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R+E V+ +DG V+ R A  +NAN+ TG++EL    +E+LS A ELPLPVFGE EY
Sbjct: 61  AVERLRAESVIRVDGEVVVRDASVVNANLPTGEVELRVTGVEVLSEAAELPLPVFGEPEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R K+R+LDLRR+TLHKNIV R+R+I+S+R RM+ + F+E  TPILTASSPEGARDF
Sbjct: 121 PEELRLKHRYLDLRRETLHKNIVLRSRVISSIRQRMVGQGFLEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+   +E V+ GVFEEF++G +V+   F RI Y D+I  YGTDKPD RNPI M
Sbjct: 240 MSFVTQEDVFAAIEPVMHGVFEEFADGKSVTPYPFPRIPYRDSIAWYGTDKPDTRNPIKM 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V++ F    F +F+KIL  +    VWAIPA  GGG+RAFCDRMN WA+ +GQPGL YI
Sbjct: 300 ADVSDRFRDGGFGLFAKILGADAKNAVWAIPAP-GGGSRAFCDRMNSWAQGEGQPGLGYI 358

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FW  D   N A  GP+AK+L    T+A+  +L +  GD+ FF+AGDP  F  FA  AR  
Sbjct: 359 FWSDD---NDAWGGPIAKNLGGEATDALMNQLGLGKGDAAFFVAGDPKVFYKFAGSARTR 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  EL +I+   FEFCWI+DFP +EW++EEKK+DF+HNPF+MPQG +E+L   D L I A
Sbjct: 416 LGTELKLIDEGRFEFCWIVDFPMFEWSDEEKKVDFSHNPFSMPQGELEALTTKDPLDILA 475

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG+E+ SG IRNH +E+ML+AF   G    VVE++FGG+  AF+ G PPHGG+
Sbjct: 476 YQYDIVCNGYELCSGAIRNHKAEIMLKAFEIAGYDASVVEDQFGGMLNAFRYGAPPHGGL 535

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A GIDRIVMLL     +REV  FP++Q   DLLM +P+     QL+++ +R  
Sbjct: 536 APGIDRIVMLLANQVAIREVIAFPLNQQGEDLLMNAPTEAGERQLKDVHIRTA 588


>gi|294676089|ref|YP_003576704.1| aspartyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294474909|gb|ADE84297.1| aspartyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 593

 Score =  716 bits (1848), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/593 (57%), Positives = 437/593 (73%), Gaps = 5/593 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C  L  ++ G  VRLSGWVHRVR HGG++F+D+RDHYGITQ++ + DS  F 
Sbjct: 1   MHAYRSHTCAALSAANAGEEVRLSGWVHRVRDHGGVLFIDLRDHYGITQILCDGDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGERE 119
             + VR+EWV+ IDG V  R A  INA I TG+IE+ A+++E+L   E +LP+ VFGE E
Sbjct: 61  ALEKVRAEWVIRIDGKVKLRDASLINAKIPTGEIEVYAREVEVLGPVEGDLPVQVFGEPE 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           YPE  R  YRFLDLRRD+LH+N++ R+ ++ S+R RM    F E  TPI+TASSPEGARD
Sbjct: 121 YPEETRLTYRFLDLRRDSLHQNMMLRSNVVRSLRNRMWDRGFTEFQTPIITASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDEDPR+DR P +FYQLD+
Sbjct: 181 FLVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV+Q+D+   ++ V++G+FEEF  G  V  N+  I Y DA++ YG+DKPDLRNPI M
Sbjct: 241 EMSFVKQEDVFAAVQPVIQGLFEEFGKGKKVDPNWPLIAYRDALKWYGSDKPDLRNPIKM 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V+EHF  S F +F+K+L  N G EV AIPA   GG+R FCDRMN +A++ G PG+ YI
Sbjct: 301 ADVSEHFKDSGFAIFAKLLE-NEGTEVRAIPAP-TGGSRKFCDRMNAFAQANGLPGMGYI 358

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FWR  E G++   GP+AK L    TEAIR +L++ +GD+ FF+ G   +F S A  ARN 
Sbjct: 359 FWRSAEDGSMEAAGPIAKALGAERTEAIRTQLNLAEGDAVFFLGGKAEQFESVAGKARNE 418

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           I +ELG+   + F F WI+DFP YE   +E KIDF+HNPF+MPQGG+E+L G D L + A
Sbjct: 419 IGRELGLTETDTFRFAWIVDFPMYE-KTDEGKIDFSHNPFSMPQGGLEALMG-DPLKVYA 476

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYDL CNG+E+ SGGIRNH  ++M +AF   G  KE VE RFGG+ +AF+ G PPHGG 
Sbjct: 477 YQYDLACNGYELVSGGIRNHRPDIMFKAFELAGYPKEEVEKRFGGMVKAFRYGAPPHGGC 536

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AAGIDRIVMLL    N+REV +FPM+Q   DL+MG+PS    EQLREL LR++
Sbjct: 537 AAGIDRIVMLLADTANIREVIMFPMNQRAEDLMMGAPSEPMNEQLRELRLRVL 589


>gi|307946773|ref|ZP_07662108.1| aspartyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307770437|gb|EFO29663.1| aspartyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 603

 Score =  715 bits (1846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/591 (57%), Positives = 435/591 (73%), Gaps = 3/591 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+HSCGDL    VG  +RLSGWVHRVR HGG++F+D+RDHYG+TQ V +PDS  F 
Sbjct: 10  MHLYRSHSCGDLRADHVGETIRLSGWVHRVRDHGGVLFIDLRDHYGMTQCVVDPDSDAFG 69

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VRSEW + IDG V  R+ ETIN+ + TG+IE+  +++E+L  A+ELPLPVFGE +Y
Sbjct: 70  LAETVRSEWCIRIDGTVKKRTEETINSELPTGEIEVFIREMEVLGAAQELPLPVFGELDY 129

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYR+LDLRR+ LH NIV R+ ++  +R RM    F E  TPI+TASSPEGARDF
Sbjct: 130 PEEVRLKYRYLDLRREKLHNNIVLRSDVVKDLRERMWNLGFNEFQTPIITASSPEGARDF 189

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 190 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 249

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q +I +T+E V+ G FE F  G  V+ N+ +I Y DA   YG+DKPDLRNP+ M 
Sbjct: 250 MSFVTQQEIFDTIEPVIAGCFERFGKGRPVNRNWPQISYKDAALWYGSDKPDLRNPLKMQ 309

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+ +L   PG E+ AIPA   GG+R FCDRMN++A+ +G PG+ YIF
Sbjct: 310 IVSEHFKGSGFAIFANLLE-QPGTEIRAIPAP-KGGSRKFCDRMNKFAQGEGLPGMGYIF 367

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G++   GP+AK++    TEAIR +L ++ GD+ FF+ G P +F + A  ARN I
Sbjct: 368 WRKAEDGSMEAAGPLAKNIGPERTEAIRQQLGLEVGDAAFFLGGKPKQFEAVAGKARNII 427

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG  + + FEF WI+DFP YE +EE  +IDF HNPF+MPQGGME+L+ +D L +  +
Sbjct: 428 GEELGHTDKDRFEFAWIVDFPIYERDEETGEIDFEHNPFSMPQGGMEALE-SDPLEVLGY 486

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG E+ SG IRNH  E+M +AF   G  KE V+ RFGG+  AFQ G PPHGG A
Sbjct: 487 QYDLTCNGNELVSGAIRNHKPEIMYKAFEIAGYPKEEVDKRFGGMVTAFQYGAPPHGGCA 546

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AGIDR+VMLL     +REV +FPM+Q   DL+MG+PS  +  QLR+L LR+
Sbjct: 547 AGIDRMVMLLADESTIREVVMFPMNQKAEDLMMGAPSEATPAQLRDLHLRL 597


>gi|294013277|ref|YP_003546737.1| aspartyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292676607|dbj|BAI98125.1| aspartyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 594

 Score =  715 bits (1846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/600 (57%), Positives = 444/600 (74%), Gaps = 10/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  ++VG+ VR+SGWVHR R HG ++F+D+RDHYG+ Q+V   D   F+
Sbjct: 1   MHAYRTHTCGALTTAEVGNEVRVSGWVHRKRDHGDLVFIDLRDHYGMVQIVTEVDGPVFQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + +S+R+E V+ + G V++R+ E +N N+ TG+IE+ A    +LS A +LPLPV GE+EY
Sbjct: 61  VIESLRAESVVTVTGKVVARAKEAVNPNLPTGEIEIRALDAVVLSAAADLPLPVAGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YRFLDLRR+TLH NIVKRT+II+ MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLRYRFLDLRRETLHANIVKRTKIISDMRRRMEGAGFTEYSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+D+ NTME V+  VFE F++G  V+   +F RI + +A+ +YG+DKPDLRNPI+
Sbjct: 241 MSFVRQEDVWNTMEPVIAEVFEAFADGKPVTPAGSFPRIPHAEAMLKYGSDKPDLRNPIL 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357
           + +VTEHF  S F +F+ +  V  G  + AIPA G G G+R F D MN WARS+G  GL 
Sbjct: 301 ITDVTEHFHGSGFGIFASL--VESGSVIRAIPAPGAGAGSRKFFDDMNNWARSEGYSGLG 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +    G     GP+AK+     T  +   L +   D  FF AG   +    A  AR
Sbjct: 359 YINIKDGVPG-----GPIAKNHGEERTAKLIEALGLGPNDGVFFAAGKEGQAAKLAGLAR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + ++L +I+ + FE CWI+DFPFYE++E+ K IDFAHNPF+MPQGG+++L+  D LS+
Sbjct: 414 IRVGEQLDLIDRDRFELCWIVDFPFYEYDEDTKSIDFAHNPFSMPQGGLDALENQDPLSL 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA+QYD+VCNG+EIASG IRN   E+M++AF  VG+S+  VE RFGGLYRAFQ G PPHG
Sbjct: 474 KAYQYDMVCNGYEIASGSIRNQSPELMVKAFEKVGLSQADVEERFGGLYRAFQYGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+AAG+DRIVMLL GA+N+RE++LFPM+Q   DLLMG+PS    +QLREL +R+VE   K
Sbjct: 534 GMAAGVDRIVMLLCGAQNLREITLFPMNQRAEDLLMGAPSPAEFKQLRELHIRVVEPQAK 593


>gi|197105320|ref|YP_002130697.1| aspartyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|238690158|sp|B4RCT1|SYD_PHEZH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|196478740|gb|ACG78268.1| aspartyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 592

 Score =  715 bits (1845), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/593 (58%), Positives = 439/593 (74%), Gaps = 7/593 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  SD GS VRLSGWVHR R HGG+IF+D+RDHYG+TQ+V +P +  F+
Sbjct: 1   MHLYRTHTCGQLRASDTGSKVRLSGWVHRKRDHGGLIFIDLRDHYGLTQLVVSPSTPGFD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + VR+E V+ +DG V++RSAET+N N+ TG+IE+  +++E+LS A ELPLPVFGE EY
Sbjct: 61  LVEHVRAESVIRVDGEVVARSAETVNPNLPTGEIEVVVRQVEVLSEAAELPLPVFGEPEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYR+LDLRR+TLH+NIV R+++I S+R RMI + F+E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRYLDLRRETLHRNIVLRSQVIQSIRRRMIDQGFLEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++   FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRLHPTKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV QDD+   +E V+ GVF EF  G  V+   F RI Y +AI +YG+DKPDLRNPI M
Sbjct: 240 MSFVTQDDVFAAIEPVMHGVFTEFGEGKPVTPYPFPRIPYREAIAKYGSDKPDLRNPIEM 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V+EHF    F +F++IL  +    VWAIP    GG+RAFCDRMN WA+ +GQPGL YI
Sbjct: 300 QDVSEHFRGGGFGLFARILE-DAKNAVWAIPGP-KGGSRAFCDRMNSWAQGEGQPGLGYI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FW  D+ G     GP+AK+L    T+ +   L +  GD+ FF+AGDP  F  FA  AR  
Sbjct: 358 FWSDDQGG---WGGPIAKNLGPEKTDGLMKALGLGQGDAAFFVAGDPKVFYKFAGAARTK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +L +I+   FEFCWI+DFP +EW++EEKK DF+HNPF+MPQG +++L   +   I A
Sbjct: 415 VGTDLKLIDEGRFEFCWIVDFPMFEWSDEEKKYDFSHNPFSMPQGELDALLNKEPGEIVA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E+ SG IRNH  +VML+AF   G   EVVE +FGG+  AF+ G PPHGG+
Sbjct: 475 YQYDIVCNGHELCSGAIRNHRPDVMLKAFEIAGYGPEVVEEQFGGMLNAFRHGAPPHGGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A GIDRIVMLL G   +REV  FP++Q   DLLM +PS VS +QL+EL +R+ 
Sbjct: 535 APGIDRIVMLLAGETAIREVIAFPLNQQGQDLLMNAPSEVSEKQLKELHIRLA 587


>gi|329890107|ref|ZP_08268450.1| aspartyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328845408|gb|EGF94972.1| aspartyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 610

 Score =  714 bits (1843), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/608 (55%), Positives = 441/608 (72%), Gaps = 23/608 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  +D G+ VRLSGW+HR R HGG++F+D+RDHYG+TQ+V +P++  FE
Sbjct: 1   MHAYRTHTCGALRSTDAGANVRLSGWIHRKRDHGGLLFIDLRDHYGLTQLVLHPETPGFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + +R+E V+ +DG V+ R   T+NAN+ TG++E+    +E+LS A ELP+PVFGE+EY
Sbjct: 61  VVERLRAESVIKVDGEVVLREGSTVNANLPTGEVEVRVLSVEVLSEAAELPMPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR   RFLDLRR+ LHKNIV R+R+I S+R RM+A+ F+E  TPILTASSPEGARDF
Sbjct: 121 PEEIRLSNRFLDLRRERLHKNIVLRSRVIQSIRTRMVAQGFLEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------------NNFLRICYDDA 282
           MSFV Q+D+   +E ++ G+F EF  G  VS                    F R+ ++ +
Sbjct: 240 MSFVTQEDVFQAIEPLMHGLFTEFGEGKPVSPIDGTHVFTNDFGQTMEHKGFERLTFEQS 299

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           ++ YG+DKPDLRNPI M +V++HF    F +F+KIL  +    VWAIPA   GG+RAFCD
Sbjct: 300 MKWYGSDKPDLRNPIKMQDVSDHFRDGGFGLFAKILGADEKNAVWAIPAP-TGGSRAFCD 358

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
           RMN WA+ +GQPGL YIFW  D+    +  GP+AK+L    T+A+   L +  GD+ FF 
Sbjct: 359 RMNSWAQGEGQPGLGYIFWSDDQQ---SWGGPIAKNLGQEPTQALMTSLGLGKGDAAFFT 415

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           AG P  F  FA  AR  +  EL +++ + F+FCWI+DFP +EW+EEEKK+DF+HNPF+MP
Sbjct: 416 AGLPSVFAKFAGLARTRVGTELKLVDEDQFKFCWIVDFPMFEWSEEEKKVDFSHNPFSMP 475

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           QGGME+L+  D L+I+A+QYD+VCNG+E+ SG IRNH +E+ML+AF   G    VVE +F
Sbjct: 476 QGGMEALETQDPLTIRAYQYDIVCNGYELCSGAIRNHKAEIMLKAFEIAGYDASVVEEQF 535

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           GG+  AF+ G PPHGG+A GIDRIVMLL G + +REV  FP++Q   DLLM +P+ V   
Sbjct: 536 GGMLNAFRFGAPPHGGLAPGIDRIVMLLAGEQAIREVIAFPLNQQGQDLLMSAPAEVEER 595

Query: 583 QLRELGLR 590
           QL+EL +R
Sbjct: 596 QLKELSIR 603


>gi|295689568|ref|YP_003593261.1| aspartyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295431471|gb|ADG10643.1| aspartyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 612

 Score =  714 bits (1842), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/610 (56%), Positives = 440/610 (72%), Gaps = 24/610 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  SD G+ VRLSGW+HR R HGG++F+D+RDHYG+TQ+V +P++  F 
Sbjct: 4   MHAYRTHNCGALRASDTGAAVRLSGWIHRKRDHGGLVFIDLRDHYGLTQLVLHPETPGFS 63

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + +R+E V+ +DG V++R A  +N N+ TG+IE+    +E+LS A ELPLPVFGE +Y
Sbjct: 64  IVERLRAESVIRVDGEVIARDASVVNPNLPTGEIEIRVSAVEVLSEAAELPLPVFGEPDY 123

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR K+R+LDLRR+TLHKNIV R+R+I S+R  M A+ F E  TPILTASSPEGARDF
Sbjct: 124 PEEIRLKHRYLDLRRETLHKNIVLRSRVIQSIRNHMFAQGFNEFQTPILTASSPEGARDF 183

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++   FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 184 LVPSRLHPEKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDVE 242

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------------NNFLRICYDDA 282
           MSFV Q+D+   +E V+ GVFEEF NG  VS                    F R+ Y  +
Sbjct: 243 MSFVTQEDVFAAIEPVMHGVFEEFGNGRRVSPISETHTFVNDFGATFEHKGFERLTYAQS 302

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +  YG+DKPDLRNPI M NV+EHF    F +F+KIL  +   +VWAIPA   GG+RAFCD
Sbjct: 303 MAWYGSDKPDLRNPIKMANVSEHFRDGGFGLFAKILGADAKNQVWAIPAP-TGGSRAFCD 361

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
           RMN WA+ +GQPGL Y+FW  D+ G     GP+AK+L    T+A+   L +  GD+ FF+
Sbjct: 362 RMNSWAQGEGQPGLGYVFWSEDQGG---WGGPIAKNLG-EPTQALMESLGLGAGDAAFFV 417

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           AGDP  F  FA  AR  +  EL +++ N F+FCWI+DFP +EWNE+EKK+DF+HNPF+MP
Sbjct: 418 AGDPAVFAKFAGLARTRVGTELKLVDENQFKFCWIVDFPMFEWNEDEKKVDFSHNPFSMP 477

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           QGG+E+L+  D L+I+A+QYD+VCNG+E+ SG IRNH  E+ML+AF   G   EVVE +F
Sbjct: 478 QGGLEALETQDPLTIRAYQYDIVCNGYELCSGAIRNHKPEIMLKAFEIAGYGPEVVEEQF 537

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           GG+  AF+ G PPHGG+A GIDRIVMLL     +REV  FP++Q   DLLM +P+ V  +
Sbjct: 538 GGMLNAFRYGAPPHGGLAPGIDRIVMLLADQVAIREVIAFPLNQQGQDLLMNAPANVLDK 597

Query: 583 QLRELGLRIV 592
           QL+EL +R  
Sbjct: 598 QLKELHIRTA 607


>gi|260576552|ref|ZP_05844541.1| aspartyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259021275|gb|EEW24582.1| aspartyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 592

 Score =  713 bits (1841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/593 (57%), Positives = 435/593 (73%), Gaps = 5/593 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C  L  S VG  VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+ DSA F 
Sbjct: 1   MHAYRSHTCAGLNSSHVGQDVRLSGWVHRVRDHGGVLFIDLRDHYGITQVIADADSAAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              +VR+EWV+ IDG+V  R A  +N  + TG+IE+ A+   +L  A+ELP+PVFGE +Y
Sbjct: 61  GLNTVRAEWVIRIDGVVKGRDASLVNPKLPTGEIEVYAKAFTVLGAADELPMPVFGEVDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R  YRFLDLRRD LH N++ R+ ++ SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLTYRFLDLRRDKLHGNMMLRSNVVRSMRQRMWDQGFTEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+   ++ V++G+FEEF+   TV  ++  I Y D+++ YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQADVFAAVQPVVQGIFEEFAPDKTVYADWPLIAYRDSLKWYGSDKPDLRNPIRMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F +F+K+L  N G EV AIPA   GG+R FCDRMN +A+ +G PG+ YI 
Sbjct: 301 DVSEHFRGSGFAIFAKLLE-NDGTEVRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGYIL 358

Query: 361 WRLDESGN-VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           WR  E G+ +   GP+AK++    TEAIR +L +  GD+ FF+ G P +F + A  ARN 
Sbjct: 359 WRNAEDGSGMEAAGPLAKNIGPERTEAIRQQLGLGLGDAAFFLGGKPEQFEAVAGRARNE 418

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           I +ELG+   NCF+F WI+DFP YE   +E KIDF+HNPF+MPQGG+E+L G D L + A
Sbjct: 419 IGRELGLTEENCFKFAWIVDFPMYE-KTDEGKIDFSHNPFSMPQGGLEALMG-DPLEVYA 476

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYDL CNG+E+ SGGIRNH  E+M +AF   G     VE RFGG+ +AF+ G PPHGG 
Sbjct: 477 YQYDLACNGYELISGGIRNHKPEIMFKAFELAGYPASEVEKRFGGMVKAFRYGAPPHGGC 536

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AAGIDRIVMLL    N+REV +FPM+Q   DLLMG+PS     QLREL LR+V
Sbjct: 537 AAGIDRIVMLLADEANIREVIMFPMNQRAEDLLMGAPSEPLSAQLRELSLRVV 589


>gi|329850487|ref|ZP_08265332.1| aspartyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328840802|gb|EGF90373.1| aspartyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 598

 Score =  711 bits (1836), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/595 (56%), Positives = 439/595 (73%), Gaps = 6/595 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CG L +SD GS  RLSGWVHR R  GG++F+D+RDHYGITQ+V NP S  F 
Sbjct: 1   MHIYRSHTCGALRLSDAGSQARLSGWVHRKRDFGGLLFIDLRDHYGITQLVFNPSSPGFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R+E V+ +DG V++R  ET N N+ TG++E+    +E+LS + ELPLPVFGE +Y
Sbjct: 61  KVERLRAESVIRVDGNVVARDPETFNPNLDTGEVEVRVTDVEVLSESAELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R K RFLDLRR+TLHKNIV R+++I S+R RM+ + F+E  TPILTASSPEGARDF
Sbjct: 121 PEEVRLKNRFLDLRRETLHKNIVLRSKVIQSIRNRMVGQGFLEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+   +E V+ G+F EF +G  VS+  F RI Y ++I +YG+DKPDLRNPI M
Sbjct: 240 MSFVTQEDVFAAIEPVIHGLFTEFGDGKRVSSYPFQRIPYKESIAKYGSDKPDLRNPIEM 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V+ HF  S F+VF+ IL  + G  VWAIPAK  GG+RAFCD+MN WA+ +GQ GL YI
Sbjct: 300 QDVSVHFAGSGFKVFASILEQD-GTAVWAIPAK-TGGSRAFCDKMNSWAQGEGQKGLGYI 357

Query: 360 FWRLDESG--NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           FWR  E     +   GP+AK++    TEA+R +L + +GD+ FF+AG   +F  FA  AR
Sbjct: 358 FWRTPEGAAEGLEAAGPIAKNIGEERTEALRQQLGLDNGDAAFFVAGKVDEFVKFAGSAR 417

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+++ + F FCWI+DFP +EWN+EEKKIDF+HNPF+MPQG ME+L   D   I
Sbjct: 418 TKVGTDLGLVDEDQFRFCWIVDFPMFEWNDEEKKIDFSHNPFSMPQGEMEALLTKDPREI 477

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+QYD+VCNG+E+ SG IRNH  E+ML+AF   G   +VVE++FGG+  AF+ G PPHG
Sbjct: 478 LAYQYDIVCNGYELCSGAIRNHKQEIMLKAFEIAGYGHDVVESQFGGMLNAFKYGAPPHG 537

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+A GIDRIVMLL G   +REV  FP++Q   D++M +PS    +QL+EL +R  
Sbjct: 538 GLAPGIDRIVMLLAGQTAIREVIAFPLNQQGQDVMMSAPSDALDKQLKELHIRTA 592


>gi|307295007|ref|ZP_07574849.1| aspartyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306879481|gb|EFN10699.1| aspartyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 594

 Score =  711 bits (1834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/600 (56%), Positives = 443/600 (73%), Gaps = 10/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  ++VG+ VR+SGWVHR R HG ++F+D+RDHYG+ Q+V   D   F 
Sbjct: 1   MHAYRTHNCGALTTAEVGNEVRVSGWVHRKRDHGDLVFIDLRDHYGMVQIVTEVDGPVFR 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + +S+R+E V+ + G V++R+ E +N N+ TG+IE+ A    +LS A +LPLPV GE+EY
Sbjct: 61  VIESLRAESVVTVTGKVVARAKEAVNPNLPTGEIEIRALDAVVLSAAADLPLPVAGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YRFLDLRR+TLH NIVKRT+II+ MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLRYRFLDLRRETLHANIVKRTKIISDMRRRMEGAGFTEYSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+D+ NTME V+  VFE+F++G  V+   +F RI + +A+ +YG+DKPDLRNPI+
Sbjct: 241 MSFVTQEDVWNTMEPVIAQVFEQFADGKPVTPAGSFPRIPHAEAMLKYGSDKPDLRNPIL 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357
           + +VT+HF  S F +F+ +  V  G  + AIPA G G G+R F D MN WAR++G  GL 
Sbjct: 301 ITDVTDHFHGSGFGIFASL--VESGSVIRAIPAPGAGAGSRKFFDDMNNWARTEGYSGLG 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +    G     GP+AK+     T  +   L +   D  FF AG   +    A  AR
Sbjct: 359 YINIKDGVPG-----GPIAKNHGEERTAKLIEALGLGLNDGVFFAAGKESQAAKLAGLAR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + ++L +I+ + FE CWI+DFPFYE++E+ K IDFAHNPF+MPQGG+++L   D L+I
Sbjct: 414 IRVGEQLDLIDKDRFELCWIVDFPFYEYDEDTKSIDFAHNPFSMPQGGLDALNDQDPLTI 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+QYD+VCNG+EIASG IRN   E+M++AF  VG+S++ VE RFGGLYRAFQ G PPHG
Sbjct: 474 NAYQYDMVCNGYEIASGSIRNQSPELMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+AAG+DRIVMLL GA+N+RE++LFPM+Q   DLLMG+PS    +QLREL +R++E   K
Sbjct: 534 GMAAGVDRIVMLLCGAQNLREITLFPMNQRAEDLLMGAPSAAEFKQLRELNIRVMEPQTK 593


>gi|110678506|ref|YP_681513.1| aspartyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|122972984|sp|Q16B16|SYD_ROSDO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|109454622|gb|ABG30827.1| aspartyl-tRNA synthetase, putative [Roseobacter denitrificans OCh
           114]
          Length = 591

 Score =  709 bits (1831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/592 (56%), Positives = 427/592 (72%), Gaps = 4/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL   DVG  VRLSGWVHRVR HGG++F+D+RDHYGITQV+ +PDS  FE
Sbjct: 1   MHMYRSHTCADLSAQDVGKTVRLSGWVHRVRDHGGVLFIDLRDHYGITQVLCDPDSPVFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR+EW + +DG+V +R A  IN  I TG+IEL  + +E+L  +EELPL VFG++EY
Sbjct: 61  QMEQVRAEWCIRVDGVVKARDASLINPKISTGEIELFVKDLEVLGASEELPLQVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYR+LDLRR  +  N+  R+ ++ S+R +M   +F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLKYRYLDLRRANMQANMKLRSDVVASLRQQMWKADFREFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGRFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ + ++ VL  VFE+F NG  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQQDVFDVIQPVLTQVFEQFGNGKAVDQEWPQISYKDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F +F+ +L    G E+ AIPA  GGG+R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 SVSEHFAGSGFAIFANLLE-QEGTEIRAIPAP-GGGSRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR D+   +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F + A  ARNHI
Sbjct: 359 WR-DQGAGMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKAFETVAGKARNHI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             ELG+ + N F F WI+DFP YE + E  +IDF HNPF+MPQGG+E+L+G D LS+  +
Sbjct: 418 GMELGLTDQNRFAFAWIVDFPIYEKDSETGRIDFEHNPFSMPQGGLEALQG-DPLSVVGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G  ++ V  RFGG+  AFQ G PPHGG A
Sbjct: 477 QYDLSCNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVRKRFGGMVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDRIVMLL    N+REV LFPM+Q   DL+M +PS    EQL ELGLR++
Sbjct: 537 AGIDRIVMLLAEEANIREVILFPMNQRAEDLMMSAPSEPESEQLMELGLRVI 588


>gi|260432891|ref|ZP_05786862.1| aspartyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416719|gb|EEX09978.1| aspartyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 591

 Score =  709 bits (1831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/592 (56%), Positives = 434/592 (73%), Gaps = 4/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL  ++VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+ + DSA F 
Sbjct: 1   MHAYRSHTCADLTAANVGETVRLSGWVHRVRDHGGVLFIDLRDHYGVTQVLCDADSAAFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R  E +N  + TG+IE+  +++E+L  AEELPL VFG++EY
Sbjct: 61  ALEKVRSEWCIRIDGTVKARDPELVNPKLPTGEIEVYVRELEVLGAAEELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N+  R+ +I SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREAMQRNMALRSDVIASMRRRMWDQGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T++ VL G+FEEF  G  V   + +I Y DA   YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQQDVFDTIQPVLTGIFEEFGGGRKVDKVWPQISYKDAALWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F +F+K+L    G E+ AIPA  GGG+R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSDHFRGSGFAIFAKLLE-QEGTEIRAIPAP-GGGSRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E+G  A  GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  AR+ I
Sbjct: 359 WREGENGMEAA-GPLAKNIGPERTEAIRQQLGLGKGDAAFFLGGKPKAFEKVAGKARDVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+ + + F F WI+DFP YE +EE  +IDF HNPF+MPQGGME+L+G D L +K +
Sbjct: 418 GEELGLTDKDRFAFAWIVDFPIYEKDEETGEIDFEHNPFSMPQGGMEALQG-DPLEVKGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+ML+AF   G  ++ V++RFG L+ AF  G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHKPEIMLKAFELAGYGEDEVKSRFGALFNAFHYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDRIVMLL    N+REV +FPM+Q   DL+M +PS  + +QL ELGLRI+
Sbjct: 537 AGIDRIVMLLADEANIREVMMFPMNQRAEDLMMRAPSDPTSDQLMELGLRII 588


>gi|163742945|ref|ZP_02150329.1| aspartyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161383909|gb|EDQ08294.1| aspartyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 592

 Score =  709 bits (1829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/592 (56%), Positives = 435/592 (73%), Gaps = 4/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  S+VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS  F 
Sbjct: 1   MHDYRSHTCAELNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R    +N  I TG+IE+  + IE+L  +EELPL VFGE+EY
Sbjct: 61  EIEKVRSEWCIRIDGNVKARDESLVNDKIPTGEIEVFIRDIEVLGKSEELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + KN++ R+ +I S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQKNMLLRSNMIQSIRRRMWDKGFNEYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T++ V++GVFEEF  G  V + + +I Y DA + YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQQDVFDTIQPVMQGVFEEFGKGRKVDSEWPQISYKDAAKWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           + +EHF  S F +F+ +L  N G E+ AIPA   GG+R FCDRMN++A+ +G PG+ YIF
Sbjct: 301 DCSEHFRGSGFAIFANLLE-NEGTEIRAIPAP-KGGSRKFCDRMNKFAQGEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR D+   +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F S A  AR  I
Sbjct: 359 WR-DQGEGMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKTFESVAGRARTVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+ + + F FCWI+DFP YE +EE  KIDF HNPF+MPQGGM++L  +D L++K +
Sbjct: 418 GEELGLTDKDRFAFCWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALL-SDPLAVKGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G  KE VE RFGG+  AFQ G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDR+VMLL    N+REV +FPM+Q   DL+M +PS    +QL ELGLR++
Sbjct: 537 AGIDRMVMLLADEANIREVIMFPMNQRAEDLMMAAPSEPMSDQLMELGLRVI 588


>gi|163737749|ref|ZP_02145166.1| aspartyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161389275|gb|EDQ13627.1| aspartyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 592

 Score =  707 bits (1826), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/592 (56%), Positives = 435/592 (73%), Gaps = 4/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  S+VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS  F 
Sbjct: 1   MHDYRSHTCAELNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R    +N  I TG+IE+  + IE+L  +EELPL VFGE+EY
Sbjct: 61  EIEKVRSEWCIRIDGNVKARDESLVNDKIPTGEIEVFIRDIEVLGKSEELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + KN++ R+ +I S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQKNMLLRSNMIQSIRRRMWDKGFNEYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T++ V++GVFEEF  G  V + + ++ Y DA + YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQQDVFDTIQPVMQGVFEEFGKGRKVDSEWPQVSYKDAAKWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           + +EHF  S F +F+ +L  N G E+ AIPA   GG+R FCDRMN++A+ +G PG+ YIF
Sbjct: 301 DCSEHFRGSGFAIFANLLE-NEGTEIRAIPAP-KGGSRKFCDRMNKFAQGEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR D+   +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F S A  AR  I
Sbjct: 359 WR-DQGEGMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKTFESVAGRARTVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+ + + F FCWI+DFP YE +EE  KIDF HNPF+MPQGGM++L  +D L++K +
Sbjct: 418 GEELGLTDKDRFAFCWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALL-SDPLAVKGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G  KE VE RFGG+  AFQ G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDR+VMLL    N+REV +FPM+Q   DL+M +PS    +QL ELGLR++
Sbjct: 537 AGIDRMVMLLADEANIREVIMFPMNQRAEDLMMSAPSEPMSDQLMELGLRVI 588


>gi|126732724|ref|ZP_01748520.1| aspartyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126706854|gb|EBA05924.1| aspartyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 593

 Score =  707 bits (1824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/594 (56%), Positives = 435/594 (73%), Gaps = 6/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL   +VG  VRLSGWVHR+R HGGI+F+D+RDH+G TQV+ +PDS  F+
Sbjct: 1   MHAYRSHTCADLTKDNVGETVRLSGWVHRIRDHGGILFIDLRDHFGTTQVLCDPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R  E +N  + TG+IE+  +++E+L  A+ELPL VFGE+EY
Sbjct: 61  DVEKVRSEWCIRIDGNVKARDPELVNPKLPTGEIEVFVRELEVLGQAQELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYR+LDLRR+ + +N+  R+ ++ SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLKYRYLDLRRENMQRNMTLRSDVVASMRRRMWDKGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFVEQ D+ +T+  V+ GVFEEF  G +V     + +I Y +A  +YGTDKPDLRNPI 
Sbjct: 241 MSFVEQQDVFDTISPVIAGVFEEFGGGKSVDAPETWPQIPYKEAALKYGTDKPDLRNPIE 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M +V+EHF  S F +F+K+L  + G E+ AIPA   GG+R FCDRMN WA+ +G PG+ Y
Sbjct: 301 MQDVSEHFRGSGFAIFAKLLEQD-GTEIRAIPAP-TGGSRKFCDRMNAWAQKEGLPGMGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IFWR D+   +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  AR+
Sbjct: 359 IFWR-DQGDGMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPASFQKVAGRARD 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + Q+L +I+ N F F WI+DFP YE +EE  +IDF HNPF+MPQGGME+L+G D +++K
Sbjct: 418 VLGQDLKLIDENRFAFAWIVDFPIYEKDEETGEIDFEHNPFSMPQGGMEALQG-DPMAVK 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            +QYDL CNG+E+ SG IRNH  EVML+AF   G   + V+ RFG L+ AF  G PPHGG
Sbjct: 477 GYQYDLACNGYELVSGAIRNHKPEVMLKAFELAGYGADEVKARFGALFNAFHYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            AAGIDRIVMLL G  N+REV +FPM+Q   DL+M +PS  S +QL ELGLRI+
Sbjct: 537 CAAGIDRIVMLLAGTSNIREVIMFPMNQRAEDLMMNAPSDPSSDQLMELGLRIM 590


>gi|254421112|ref|ZP_05034836.1| aspartyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196187289|gb|EDX82265.1| aspartyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 610

 Score =  707 bits (1824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/610 (55%), Positives = 435/610 (71%), Gaps = 23/610 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CG L  SD GS VRLSGWVHR R HGG++F+D+RDHYG+TQ+V +P++  F 
Sbjct: 1   MHAYRSHTCGALRASDAGSAVRLSGWVHRKRDHGGLLFIDLRDHYGLTQLVLHPETPGFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R+E V+ IDG V++R A  +N N+ TG++E+  Q +E+LS A ELP+PVFG++EY
Sbjct: 61  AVERLRAESVIKIDGEVVAREAGVVNPNLPTGEVEVRVQGVEVLSEAAELPMPVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR   RFLDLRR+ LHKNIV R+R+I+S+R RM+ + F+E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLANRFLDLRRERLHKNIVLRSRVISSIRQRMVGQGFLEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------------NNFLRICYDDA 282
           MSFV Q+D+   +E ++ GVFEEF  G  VS                    F R+ Y  +
Sbjct: 240 MSFVTQEDVFAAIEPLMHGVFEEFGEGKPVSPIDGVHVFTNDFGETFEHKGFERLTYAQS 299

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +  YG+DKPDLRNPI M  V++HF    F +F+KIL  +    VWAIPA   GG+RAFCD
Sbjct: 300 MAWYGSDKPDLRNPIKMQVVSDHFRDGGFGLFAKILGADEKNAVWAIPAP-TGGSRAFCD 358

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
           RMN WA+ +GQPG+ YIFW  D+    A  GP+AK+L    TE +   L +  GD+ FF 
Sbjct: 359 RMNSWAQGEGQPGMGYIFWSEDQG---AWGGPIAKNLGQEPTETLMASLGLGKGDAAFFT 415

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           AG P  F  FA  AR  +  EL +I+ N F+FCWI+DFP +EW+EEEKK+DF+HNPF+MP
Sbjct: 416 AGLPSVFAKFAGLARTRVGTELKLIDENQFKFCWIVDFPMFEWSEEEKKVDFSHNPFSMP 475

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           QGG+E+L+  D L+I+AFQYD+VCNG+E+ SG IRNH +E+ML+AF   G    VVE +F
Sbjct: 476 QGGLEALETQDPLTIRAFQYDIVCNGYELCSGAIRNHKAEIMLKAFEIAGYDASVVEEQF 535

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           GG+  AF+ G PPHGG+A GIDRIVMLL G   +REV  FP++Q   DLLM +P+     
Sbjct: 536 GGMLNAFRYGAPPHGGLAPGIDRIVMLLAGETAIREVIAFPLNQQGEDLLMNAPTEAEER 595

Query: 583 QLRELGLRIV 592
           QL+++ +R  
Sbjct: 596 QLKDVHIRTA 605


>gi|167646519|ref|YP_001684182.1| aspartyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189082089|sp|B0SWQ6|SYD_CAUSK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167348949|gb|ABZ71684.1| aspartyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 609

 Score =  706 bits (1821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/608 (55%), Positives = 437/608 (71%), Gaps = 24/608 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  SD G+ VR+SGW+HR R HGG++F+D+RDHYG+TQ+V +P++  F+
Sbjct: 1   MHAYRTHTCGALRASDTGASVRVSGWIHRKRDHGGLVFIDLRDHYGLTQLVLHPETPGFD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + +R+E V+ IDG V++R A  +N N+ TG+IE+    +E+LS A ELPLPVFGE +Y
Sbjct: 61  VVERLRAESVIKIDGEVVARDAAAVNPNLPTGEIEIRVSAVEVLSEAAELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR K+R+LDLRR+TLHKNIV R+R+I S+R RM A+ F E  TPILTASSPEGARDF
Sbjct: 121 PEEIRLKHRYLDLRRETLHKNIVLRSRVIQSIRSRMFAQGFNEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------------NNFLRICYDDA 282
           MSFV Q+D+   +E V+ GVFEEFS G  VS                    F R+ Y  +
Sbjct: 240 MSFVTQEDVFAAIEPVMHGVFEEFSAGKPVSPIDGVHTFTNDFGATLEHRGFERLTYAQS 299

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +  YG+DKPDLRNPI M +V+EHF    F +F+KIL  +P   VWAIPA   GG+RAFCD
Sbjct: 300 MAWYGSDKPDLRNPIKMQDVSEHFRDGGFGLFAKILGADPKNRVWAIPAP-TGGSRAFCD 358

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
           RMN WA+ +GQPGL Y F+  D++G     GP+AK+L     + I  +L +   D+ FF+
Sbjct: 359 RMNSWAQGEGQPGLGYAFFSKDQNG---WGGPIAKNLG-EGFQPIADQLGLTHDDAVFFV 414

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           AGDP  F  FA  AR  +  EL +++   F+FCWI+DFP +EWNE+EKK+DF+HNPF+MP
Sbjct: 415 AGDPAVFAKFAGLARTRVGTELKLVDEEQFKFCWIVDFPMFEWNEDEKKVDFSHNPFSMP 474

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           QGG+E+L+  D L+I+A+QYD+VCNG+E+ SG IRNH  E+ML+AF   G   EVVE +F
Sbjct: 475 QGGLEALETQDPLTIRAYQYDIVCNGYELCSGAIRNHKPEIMLKAFEVAGYGAEVVEEQF 534

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           GG+  AF+ G PPHGG+A GIDRIVMLL     +REV  FP++Q   DLLM +P+     
Sbjct: 535 GGMLNAFRYGAPPHGGLAPGIDRIVMLLAEQVAIREVIAFPLNQQGQDLLMNAPAEAQDR 594

Query: 583 QLRELGLR 590
           Q +EL +R
Sbjct: 595 QYKELYIR 602


>gi|119384915|ref|YP_915971.1| aspartyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|166225372|sp|A1B431|SYD_PARDP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119374682|gb|ABL70275.1| aspartyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 591

 Score =  705 bits (1819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/592 (55%), Positives = 437/592 (73%), Gaps = 4/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M  YR+H+CG+L  +  GS +RLSGWVHRVR HGG++F+D+RDHYGITQV+A+ DS  F 
Sbjct: 1   MSAYRSHTCGELTAAAAGSEIRLSGWVHRVRDHGGVLFIDLRDHYGITQVIADSDSLAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R+E V+ IDG V  R    +N  + TG+IE+ A  +E+L  A++LPLPVFG+++Y
Sbjct: 61  ALEKLRAETVIRIDGRVKLRDPSLVNPKLPTGEIEVYATAMEVLGAADDLPLPVFGDQDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R  YRFLDLRR++LH NI+ R+R++  +R  M  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLTYRFLDLRRESLHNNIMLRSRVVKWLRDAMWDQGFTEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M +GFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   ++ V++G+FEEF  G  V  ++ RI Y +A+ +YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVFRAIQPVIQGLFEEFGGGRRVDTDWPRIPYAEAMLKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F +F+K+L  + G EV AIPA  GGG+R F DRMN +A+ QG PG+ YIF
Sbjct: 301 VVSDHFRGSGFAIFAKLLEQD-GTEVRAIPAP-GGGSRKFADRMNAFAQGQGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G     GP+AK L    TEAIR +L + +GD+ FF+ G P  F + A  ARN I
Sbjct: 359 WRKAEDGTTEAAGPIAKALGPEKTEAIRTQLGLGEGDAAFFLGGKPETFEAVAGRARNEI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ N F+F WI+DFP YE   E+ +IDF+HNPF+MPQGG+++L+G D L++  +
Sbjct: 419 GRELGLIDENQFKFAWIVDFPMYE-KGEDGRIDFSHNPFSMPQGGLDALEG-DPLAVMGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G  ++ VE RFGG+ +AF+ G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHRPEIMFRAFELAGYGRDEVEKRFGGMVKAFRYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDRIVMLL    N+REV +FPM+Q   DL+MG+PS  + EQLREL LR++
Sbjct: 537 AGIDRIVMLLADEVNIREVIMFPMNQRAEDLMMGAPSEPTNEQLRELRLRVL 588


>gi|126739917|ref|ZP_01755608.1| aspartyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126719149|gb|EBA15860.1| aspartyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 617

 Score =  704 bits (1818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/616 (54%), Positives = 436/616 (70%), Gaps = 27/616 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  S+VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS  F 
Sbjct: 1   MHAYRSHTCAELNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + I+G V++R    +N  I TG++E+  + +E+L  AEELPL VFGE+EY
Sbjct: 61  ELEKVRSEWCIKIEGNVLARDESLVNNAIPTGEVEVFIRDLEVLGKAEELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N+V R  +I S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQRNMVLRANMIQSIRKRMWDKGFNEYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T++ V++GVFEEF  G  V + + +I Y DA + YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQQDVFDTIQPVMQGVFEEFGKGRKVDSEWPQISYKDAAKWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           + +EHF  S F +F+ +L  N G EV AIPA   GG+R FCDRMN++A+ +G PG+ YIF
Sbjct: 301 DCSEHFRGSGFAIFASLLE-NEGTEVRAIPAP-TGGSRKFCDRMNKFAQGEGLPGMGYIF 358

Query: 361 WRLDESGNVA------------------------GMGPVAKHLNIVNTEAIRVRLDMQDG 396
           WR   + ++A                          GPVAK++    TEAIR +L +  G
Sbjct: 359 WRKQSADSIAQERGISVKEVNALIKSGEITLGDEAAGPVAKNIGPERTEAIRQQLGLDVG 418

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+ FF+ G P  F S A  AR  I +ELG+++ + F FCWI+DFP YE +EE  KIDF H
Sbjct: 419 DAVFFLGGKPKAFESVAGRARTVIGEELGLVDKDRFAFCWIVDFPIYEKDEETGKIDFEH 478

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           NPF+MPQGGM++L   D L++K +QYDL CNG+E+ SG IRNH  E+M +AF   G  KE
Sbjct: 479 NPFSMPQGGMDALL-TDPLAVKGYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKE 537

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
            VE RFGG+  AFQ G PPHGG AAGIDR+VMLL    N+REV +FPM+Q   DL+M +P
Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMSAP 597

Query: 577 STVSVEQLRELGLRIV 592
           S    EQL ELGLR++
Sbjct: 598 SEPMSEQLMELGLRVI 613


>gi|163735286|ref|ZP_02142721.1| aspartyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161391500|gb|EDQ15834.1| aspartyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 589

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/589 (56%), Positives = 425/589 (72%), Gaps = 4/589 (0%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR+H+C DL   DVG  VRLSGWVHRVR HGG++FLD+RDHYGITQ++ +PDS  F+  +
Sbjct: 2   YRSHTCADLSAQDVGETVRLSGWVHRVRDHGGVLFLDLRDHYGITQLLCDPDSPVFDQME 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+EW + +DGLV +R A  +N  I TG+IE+  + +E+L  +EELPL VFG++EYPE 
Sbjct: 62  KVRAEWCIRVDGLVKARDASLVNDKISTGEIEVFVKGLEVLGASEELPLQVFGDQEYPEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +  N+  R+ ++ S+R +M   +F E  TPI+TASSPEGARDFLVP
Sbjct: 122 TRLKYRYLDLRRANMQANMKLRSDVVASLRQQMWKADFREFQTPIITASSPEGARDFLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+EMSF
Sbjct: 182 SRLHPGRFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDIEMSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V Q D+ + ++ VL G+FEEF NG  V   + +I Y DA   YG+DKPDLRNPI M +V+
Sbjct: 242 VTQQDVFDVIQPVLTGLFEEFGNGKAVDQEWPQISYKDAALWYGSDKPDLRNPIKMQSVS 301

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           EHF  S F +F+ +L    G E+ AIPA  GGG+R FCDRMN +A+ +G PG+ YIFWR 
Sbjct: 302 EHFAGSGFAIFANLLE-QEGTEIRAIPAP-GGGSRKFCDRMNAFAQKEGLPGMGYIFWR- 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           D+   +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  ARNHI  E
Sbjct: 359 DQGAGMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKAFEPVAGKARNHIGME 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + N F F WI+DFP YE + E  +IDF HNPF+MPQGG+E+L+G D L++  +QYD
Sbjct: 419 LGLTDQNRFAFAWIVDFPIYEKDSETGRIDFEHNPFSMPQGGLEALQG-DPLTVVGYQYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L CNG+E+ SG IRNH  E+M +AF   G  ++ V  RFGG+  AFQ G PPHGG AAGI
Sbjct: 478 LSCNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVRKRFGGMVNAFQYGAPPHGGCAAGI 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           DRIVMLL    N+REV LFPM+Q   DL+M +PS    EQL ELGLR++
Sbjct: 538 DRIVMLLAEEANIREVILFPMNQRAEDLMMSAPSEPESEQLMELGLRVI 586


>gi|310814751|ref|YP_003962715.1| aspartyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308753486|gb|ADO41415.1| aspartyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 593

 Score =  703 bits (1814), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/592 (55%), Positives = 425/592 (71%), Gaps = 3/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C  L  ++VG  VRLSGWVHRVR HGGI+F+D+RDHYGITQV+ +PDS  F 
Sbjct: 1   MHAYRSHTCAALNAANVGQNVRLSGWVHRVRDHGGILFIDLRDHYGITQVLVDPDSPAFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR+EW + IDGLV +R A  +N  + TG+IE+  Q IE+L  A ELPL VFGE+EY
Sbjct: 61  AVEKVRAEWCIRIDGLVKARDASLVNPKLATGEIEVFVQDIEVLGAAAELPLQVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + + +  R+ ++ S+R RM  + F E  TPI+T+SSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREDMQRKMTLRSDVVASIRQRMWGKGFREYQTPIITSSSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           L+PSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LIPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T++ VL G+FEEF  G  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQKDVFDTIQPVLSGLFEEFGGGRKVDTEWPQISYKDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F VF+K+L  + G ++ AIPA   GG+R FCDRMN WA+ +G PG+ YIF
Sbjct: 301 VVSEHFAGSGFAVFAKLLEQD-GTQIRAIPAP-TGGSRKFCDRMNVWAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  ++G +   GP+AK++    TEAIR++L +  GD+ FF+ G P  F   A  ARN I
Sbjct: 359 WRTGDNGEMEAAGPLAKNIGPERTEAIRLQLGLGLGDAAFFLGGKPAVFEKIAGKARNEI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             ELG+   + F F WI+DFP Y+ + E    +F HNPF+MPQGG+E+L G D L+++ +
Sbjct: 419 GNELGLTEKDRFAFAWIVDFPLYQQDAETGAYEFEHNPFSMPQGGLEALNG-DPLAVRGY 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G   + V  RFGG+  AF  G PPHGG A
Sbjct: 478 QYDLACNGYELVSGAIRNHQPEIMFKAFEIAGYGPDEVRRRFGGMVNAFTYGAPPHGGCA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDRIVMLL   +N+REV LFPM+Q   D++MG+P+  + EQLREL LR++
Sbjct: 538 AGIDRIVMLLADEQNIREVILFPMNQRAEDVMMGAPNEPTNEQLRELRLRVL 589


>gi|83944314|ref|ZP_00956769.1| aspartyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83844858|gb|EAP82740.1| aspartyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 616

 Score =  703 bits (1814), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/616 (55%), Positives = 432/616 (70%), Gaps = 27/616 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL   +VG  VRLSGWVHRVR HGGI+F+D+RDHYG+TQV+ +PDS  F 
Sbjct: 1   MHAYRSHTCADLSKENVGDKVRLSGWVHRVRDHGGILFIDLRDHYGMTQVLCDPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R A+ +N  I TG+IE+  + IE+L  A+ELPL VFG++EY
Sbjct: 61  EVEKVRSEWCIRIDGEVKARDADLVNTKIPTGEIEVFVRDIEVLGPAKELPLQVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ +  N+V R+ +++S+R RM  +NF E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQDNMVLRSDVVSSIRKRMWDQNFKEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ VL G+FEEF  G  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVLTGIFEEFGGGKAVDQEWPQISYKDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F +F+K+L    G E+ AIPA   GG+R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSDHFRDSGFAIFAKLLE-QEGTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVA---------------------GM---GPVAKHLNIVNTEAIRVRLDMQDG 396
           WR   + +VA                     GM   GP+AK++    TEAIR +L +  G
Sbjct: 359 WREKTADSVAQELGITVKEAQAKLKAGEVEGGMEAAGPLAKNIGPERTEAIRQQLGLDVG 418

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+ FF+ G P  F   A  ARN I  ELG+ + N F F WI+DFP YE +EE  KIDF H
Sbjct: 419 DAAFFLGGKPKSFEGVAGRARNVIGAELGLTDENRFAFAWIVDFPIYEKDEETGKIDFEH 478

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           NPF+MPQGGM++L G D L +  +QYDL CNG+E+ SG IRNH  E+M +AF   G  KE
Sbjct: 479 NPFSMPQGGMDALMG-DPLEVLGYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKE 537

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
            VE RFGG+  AFQ G PPHGG AAGIDRIVMLL    N+REV LFPM+Q   DL+M +P
Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRIVMLLAEEANIREVILFPMNQRAEDLMMNAP 597

Query: 577 STVSVEQLRELGLRIV 592
           S    +QL ELGLR++
Sbjct: 598 SEPQSDQLMELGLRVI 613


>gi|149915882|ref|ZP_01904406.1| aspartyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149810205|gb|EDM70051.1| aspartyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 592

 Score =  702 bits (1812), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/594 (56%), Positives = 437/594 (73%), Gaps = 4/594 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  S+VG  VRLSGWVHR+R HGG++F+D+RDHYGITQV+ +PDS  F+
Sbjct: 1   MHAYRSHTCAELDTSNVGQTVRLSGWVHRIRDHGGVLFIDLRDHYGITQVLCDPDSPVFD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R A  INA I TG+IE+  + +E+L  A+ELPL VFG++EY
Sbjct: 61  QVERVRSEWCIRIDGDVKARDASLINAKIPTGEIEVFIRDMEVLGSAKELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R ++R+LDLRR+ + +N+  R+ ++ S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRHRYLDLRREEMQRNMTLRSDVVASIRRRMWDKGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQ +KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGRFYALPQAPQLFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ VL  VFEEF  G+ V  ++  I Y DA   YGTDKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVLESVFEEFGPGHKVDKHWPHISYRDAALWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F +F+K+L  + G ++ AIPA   GG+R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 DVSEHFRGSGFAIFAKLLEQD-GTQIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E+G  A  GP+AK++    TEAIR++L +  GD+ FF+ G P  F S A  AR  I
Sbjct: 359 WRDGENGMEAA-GPLAKNIGPERTEAIRLQLGLGKGDAAFFLGGKPQSFESVAGRARTVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+ + + F FCW++DFP YE ++E  KIDF+HNPF+MPQGG+++L G D L +  F
Sbjct: 418 GEELGLTDKDRFAFCWVVDFPMYEKDDETGKIDFSHNPFSMPQGGLDALSG-DPLEVLGF 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  ++M++AF   G  +  V  RFGGL  AFQ G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHKLDIMIKAFELAGYDEAEVHKRFGGLVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           AGIDRIVMLL   +N+REV +FPM+Q   DL+M +PS  S EQL ELGLR++E 
Sbjct: 537 AGIDRIVMLLANEQNIREVIMFPMNQRAEDLMMNAPSEASSEQLMELGLRVIEQ 590


>gi|83953355|ref|ZP_00962077.1| aspartyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83842323|gb|EAP81491.1| aspartyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 616

 Score =  701 bits (1810), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/616 (55%), Positives = 432/616 (70%), Gaps = 27/616 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL   +VG  VRLSGWVHRVR HGGI+F+D+RDHYG+TQV+ +PDS  F 
Sbjct: 1   MHAYRSHTCADLSKENVGDKVRLSGWVHRVRDHGGILFIDLRDHYGMTQVLCDPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R A+ +N  I TG+IE+  + IE+L  A+ELPL VFG++EY
Sbjct: 61  EVEKVRSEWCIRIDGEVKARDADLVNTKIPTGEIEVFVRDIEVLGPAKELPLQVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ +  N+V R+ +++S+R RM  +NF E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQDNMVLRSDVVSSIRKRMWDQNFKEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ VL G+FEEF  G  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVLTGIFEEFGGGKAVDQEWPQISYKDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F +F+K+L    G E+ AIPA   GG+R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSDHFRDSGFAIFAKLLE-QEGTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVA---------------------GM---GPVAKHLNIVNTEAIRVRLDMQDG 396
           WR   + +VA                     GM   GP+AK++    TEAIR +L +  G
Sbjct: 359 WREKTADSVAQELGITVKEAQAKLKAGEVEGGMEPAGPLAKNIGPERTEAIRQQLGLDVG 418

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+ FF+ G P  F   A  ARN I  ELG+ + N F F WI+DFP YE +EE  KIDF H
Sbjct: 419 DAAFFLGGKPKSFEGVAGRARNVIGAELGLTDENRFAFAWIVDFPIYEKDEETGKIDFEH 478

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           NPF+MPQGGM++L G D L +  +QYDL CNG+E+ SG IRNH  E+M +AF   G  K+
Sbjct: 479 NPFSMPQGGMDALMG-DPLEVLGYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKD 537

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
            VE RFGG+  AFQ G PPHGG AAGIDRIVMLL    N+REV LFPM+Q   DL+M +P
Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRIVMLLAEEANIREVILFPMNQRAEDLMMNAP 597

Query: 577 STVSVEQLRELGLRIV 592
           S    +QL ELGLR++
Sbjct: 598 SEPQSDQLMELGLRVI 613


>gi|163744719|ref|ZP_02152079.1| aspartyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161381537|gb|EDQ05946.1| aspartyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 591

 Score =  701 bits (1810), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/592 (56%), Positives = 427/592 (72%), Gaps = 4/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL + + G  VRLSGWVHRVR HGG++FLD+RDHYGITQV+ +PDS  F 
Sbjct: 1   MHAYRSHTCADLSLENKGDNVRLSGWVHRVRDHGGVLFLDLRDHYGITQVICDPDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR+EW + IDG V +R    +N  + TG IE+ A++IE+L  A ELPL VFG++EY
Sbjct: 61  EMEKVRAEWCVRIDGTVKARDESLVNPKLPTGAIEVYAREIEVLGSAAELPLQVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + KN+  R+ ++ S+R RM  +NF E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQKNMTLRSDVVTSIRKRMWDQNFREFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T++ V+ G+FEEF  G  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQQDVFDTIQPVIAGIFEEFGGGKKVDETWEQISYKDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L  + G E+ AIPA   GG+R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSEHFRDSGFAIFAKLLEQD-GTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR D+   +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F + A  ARN I
Sbjct: 359 WR-DQGNGMEAAGPLAKNIGPERTEAIRQQLGLNVGDAAFFLGGKPKSFEAVAGRARNVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL + + N F F WI+DFP YE +EE  KIDF HNPF+MPQGGM++L  +D L +  +
Sbjct: 418 GEELNLTDKNRFAFAWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALL-DDPLKVLGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G  ++ V  RFGG+  AFQ G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVRKRFGGMVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDRIVMLL    N+REV LFPM+Q   DL+M +PS  + +QL ELGLR++
Sbjct: 537 AGIDRIVMLLAEEANIREVILFPMNQRAEDLMMNAPSEPTSDQLMELGLRVI 588


>gi|159045173|ref|YP_001533967.1| aspartyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|189082096|sp|A8LI32|SYD_DINSH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157912933|gb|ABV94366.1| aspartyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 590

 Score =  701 bits (1810), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/592 (56%), Positives = 432/592 (72%), Gaps = 5/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH +RTH+C +L    VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+ +PDS  F 
Sbjct: 1   MHAFRTHTCAELTKDAVGQTVRLSGWVHRVRDHGGVLFIDLRDHYGMTQVLCDPDSPVFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R    IN  I TG+IE+  + +E+L  AEELPLPVFG++EY
Sbjct: 61  QVEKVRSEWCIRIDGTVKARDESLINPKIPTGEIEVFIRDMEVLGTAEELPLPVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYRFLDLRR++LH NI+ R++++ S+R RM   +F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLKYRFLDLRRESLHDNIMLRSKVVQSIRKRMWDIDFTEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M  GFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVGGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T++ V+ G+FEEF  G  V  ++  I Y D+   YGTDKPDLRNPI M 
Sbjct: 241 MSFVSQQDVFDTIQPVIAGIFEEFGGGRRVDTDWPLISYRDSALWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F +F+K+L    G E+ AIPA  GGG+R FCDRMN++A+ QG PG+ YIF
Sbjct: 301 IVSDHFAGSGFAIFAKLLE-QEGTEIRAIPAP-GGGSRKFCDRMNKFAQEQGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR D+   +   GP+AK++    TEAIR +L +Q GD+ FF+ G P  F + A  AR  I
Sbjct: 359 WR-DQGQGMEAAGPLAKNIGPERTEAIRQQLGLQVGDAAFFLGGKPASFEAVAGRARTVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F WI+DFP YE  ++E +IDF+HNPF+MPQGGM +L+G D L +  +
Sbjct: 418 GEELGLIDQDRFAFAWIVDFPMYE-KDDEGRIDFSHNPFSMPQGGMAALEG-DPLEVLGY 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  ++M +AF   G   + VE RFGG+  AF+ G PPHGG A
Sbjct: 476 QYDLACNGYELVSGAIRNHKLDIMYKAFEIAGYGADEVEKRFGGMVNAFKYGPPPHGGCA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDRIVMLL    N+REV +FPM+Q   DL+M +PS  + EQLR+L LR++
Sbjct: 536 AGIDRIVMLLADTANIREVIMFPMNQRAEDLMMNAPSEPTGEQLRDLSLRVI 587


>gi|255262607|ref|ZP_05341949.1| aspartyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255104942|gb|EET47616.1| aspartyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 617

 Score =  701 bits (1809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/616 (55%), Positives = 430/616 (69%), Gaps = 27/616 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL  ++VG  VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+PDS  F 
Sbjct: 1   MHAYRSHTCADLTKANVGDTVRLSGWVHRVRDHGGLLFIDLRDHYGITQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG VM+R    +N  I TG++E+  + IE+L  A ELPL VFGE+EY
Sbjct: 61  EIEKVRSEWCIRIDGNVMARDESLVNPKIPTGEVEVFIRDIEVLGAANELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYR+LDLRR+ L  N+  R+ ++ SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLKYRYLDLRREKLQNNMKMRSDVVASMRKRMWDKGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SG+D+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ V++GVFEEF  G  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVIQGVFEEFGGGKKVDATWEQISYRDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L  N G E+ AIPA   GG+R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSEHFRGSGFAIFAKLLE-NEGTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVA---GM---------------------GPVAKHLNIVNTEAIRVRLDMQDG 396
           WR   +  +A   GM                     GP+AK++     EAIRV L + +G
Sbjct: 359 WRTQTADAIAQETGMTVKEVNAKIKAGEIEVAMEAAGPLAKNIGPERAEAIRVELGLDNG 418

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+ FF+ G P  F +FA  AR+ I   LG+ + N + F WI+DFP YE +EE  KIDF H
Sbjct: 419 DAAFFLGGKPAAFEAFAGRARSEIGDTLGLTDTNRYAFAWIVDFPIYERDEETGKIDFEH 478

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           NPF+MPQGGM +L G D   +  +QYDL CNG+E+ SG IRNH  E+M +AF   G  K+
Sbjct: 479 NPFSMPQGGMAALDG-DPEDVLGYQYDLACNGYELVSGAIRNHRPEIMFKAFEIAGYGKD 537

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
            VE RFGG+  AFQ G PPHGG AAGIDRIVMLL    N+REV +FPM+Q   DL+MG+P
Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRIVMLLAEEANIREVIMFPMNQRAEDLMMGAP 597

Query: 577 STVSVEQLRELGLRIV 592
           +    EQLREL LR++
Sbjct: 598 NDPMNEQLRELNLRVI 613


>gi|89071136|ref|ZP_01158334.1| aspartyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89043321|gb|EAR49544.1| aspartyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 592

 Score =  701 bits (1809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/592 (56%), Positives = 428/592 (72%), Gaps = 4/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH +RTH+C DL   DVG  VRLSGWVHRVR HGG++F+D+RDHYGITQV+ +PDS  F 
Sbjct: 1   MHAFRTHTCADLTRDDVGETVRLSGWVHRVRDHGGVLFIDLRDHYGITQVLCDPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG+V +R+AE +N  I TG+IE+  + IE+L  ++ELPL VFG++EY
Sbjct: 61  EVEKVRSEWCVRIDGVVKARAAELVNPKIPTGEIEVYIRDIEVLGASKELPLIVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + KN+  R+ ++ +MR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREAMQKNMTLRSDVVAAMRRRMWDKGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ V+ GVFEEF  G  V   + +I Y D+   YGTDKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVMTGVFEEFGGGRKVDEVWPQISYKDSALWYGTDKPDLRNPIKME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L  + G E+ AIPA  GGG+R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSEHFAGSGFAIFAKLLEQD-GTEIRAIPAP-GGGSRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E+G V   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  ARN I
Sbjct: 359 WRDGENG-VEAAGPLAKNIGPERTEAIRTQLGLGKGDAAFFLGGKPSSFERVAGLARNVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL + +   F F WI+DFP YE +EE   +DF+HNPF+MPQGG  +L G D L +  +
Sbjct: 418 GEELNLTDKERFAFAWIVDFPMYERDEETGAVDFSHNPFSMPQGGRGALDG-DPLEVLGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G  ++ V  RFGG+  AFQ G PPHGG A
Sbjct: 477 QYDLACNGYELISGAIRNHKPEIMFKAFELAGYGEDEVRKRFGGMVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            GIDR+VMLL    N+REV LFPM+Q   DL+M +PS  + EQLREL LR++
Sbjct: 537 VGIDRVVMLLADETNIREVILFPMNQRAEDLMMDAPSEPTNEQLRELRLRVL 588


>gi|259418879|ref|ZP_05742796.1| aspartyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259345101|gb|EEW56955.1| aspartyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 594

 Score =  701 bits (1808), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/594 (56%), Positives = 430/594 (72%), Gaps = 6/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH +R+H+C +L  S VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS  F 
Sbjct: 1   MHAFRSHTCAELNKSHVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R    +NA I TG+IE+  + IE+L  +EELPL VFGE+EY
Sbjct: 61  EIEKVRSEWCIRIDGEVKARDESLVNAKIPTGEIEVFIRDIEVLGKSEELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N+V R+ +I S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQRNMVLRSNMIRSIRNRMWDQGFNEYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTV--SNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q D+ +T+  V+ GVFEEF  G  V  +N + +I Y DA   YG+DKPDLRNPI 
Sbjct: 241 MSFVTQQDVFDTIAPVIAGVFEEFGQGRKVDAANEWPQISYKDAALWYGSDKPDLRNPIK 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M  V+EHF  S F +F+K+L    G E+ AIPA   GG+R FCDRMN +A+ +G PG+ Y
Sbjct: 301 MQVVSEHFAGSGFAIFAKLLE-QEGTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IFWR ++ G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F + A  ARN
Sbjct: 359 IFWR-EKDGEMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKTFEAVAGRARN 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I +EL + + + F F WI+DFP YE +EE  KIDF HNPF+MPQGGM++L G D L ++
Sbjct: 418 VIGEELNLTDKDRFAFAWIVDFPIYEADEETGKIDFEHNPFSMPQGGMDALNG-DPLDVR 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
             QYDL CNG+E+ SG IRNH  E+M +AF   G  KE VE RFGG+  AFQ G PPHGG
Sbjct: 477 GNQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            AAGIDR+VMLL    N+REV +FPM+Q   DL+M +PS    EQL ELGLR++
Sbjct: 537 CAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMAAPSEPMSEQLMELGLRVI 590


>gi|118590155|ref|ZP_01547558.1| aspartyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118437127|gb|EAV43765.1| aspartyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 655

 Score =  700 bits (1807), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/653 (53%), Positives = 443/653 (67%), Gaps = 65/653 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CGDL +SD G  +RLSGWVHRVR HGG++F+D+RDHYG+TQ V +PDSA F+
Sbjct: 1   MHPYRSHTCGDLRLSDEGQTIRLSGWVHRVRDHGGVLFIDLRDHYGVTQCVVDPDSAAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VRSEW + IDG V  R+ ETIN ++ TG IE+  +++EIL  A+ELPLPVFG+ EY
Sbjct: 61  LAETVRSEWCIRIDGNVKKRTDETINPDLPTGDIEVFIREMEILGAAKELPLPVFGDLEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+ LH+N++ R+ ++  +R RM    F E  TPI+TASSPEGARDF
Sbjct: 121 PEEVRLKYRFLDLRREKLHQNMILRSNVVRDLRDRMWNIGFNEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T+E V+ G FE F NG  V+ N+ +I Y D+   YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQQDVFDTIEPVIAGCFERFGNGRPVNRNWPQISYKDSALWYGTDKPDLRNPIKME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+ +L   PG E+ AIPA   GG+R FCDRMN++A+ QG PG+ YIF
Sbjct: 301 IVSEHFAGSGFAIFANLLE-QPGTEIRAIPAP-KGGSRKFCDRMNKFAQEQGLPGMGYIF 358

Query: 361 W---------------------------------------------------RLDESGNV 369
           W                                                   RL E+GNV
Sbjct: 359 WRANAEKVADEDFINRIASVHDDVIAESGGTPIDEGQKLSNIDVSLLVKMLQRLQENGNV 418

Query: 370 A-----------GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +             GP+AK++    TEAIR +L++  GD+ FF+ G P +F   AA AR 
Sbjct: 419 SEAEALFSKYMEAAGPLAKNIGSERTEAIRKQLNLDIGDAVFFLGGKPKQFEPVAAKARV 478

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I +ELG  + + FEF WI+DFP YE +EE  +IDF+HNPF+MPQGGME+L+G D L + 
Sbjct: 479 IIGEELGHTDKDRFEFAWIVDFPIYERDEETGEIDFSHNPFSMPQGGMEALEG-DPLDVL 537

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            +QYDL CNG E+ SG IRNH  E+M +AF   G   E V+ RFGG+  AFQ G PPHGG
Sbjct: 538 GYQYDLACNGHELISGAIRNHKPEIMYKAFEIAGYPAEEVDRRFGGMVNAFQYGAPPHGG 597

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            AAGIDR+VML+    N+REV LFPM+Q   DL+MG+PS  +  QLR+L LR+
Sbjct: 598 CAAGIDRMVMLMADEANIREVMLFPMNQKAEDLMMGAPSEPTSAQLRDLHLRL 650


>gi|323139674|ref|ZP_08074715.1| aspartyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322395053|gb|EFX97613.1| aspartyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 592

 Score =  699 bits (1805), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/594 (56%), Positives = 432/594 (72%), Gaps = 11/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+   +  G  +RLSGW HR+R HGG++F+D+RDHYG+TQ V +PDS  F 
Sbjct: 1   MHRYRSHNCGEPTEALAGQKIRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVVDPDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSEWV+ +DG V  R A T N ++ TG +E+   +IE+L  A ELP+PVFG+++Y
Sbjct: 61  QAEKLRSEWVVRLDGEVRKRPAGTENPDMPTGHVEIYVAEIEVLGPAGELPMPVFGDQQY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYRFLDLRR+ LH NI+ R RII+S+R RM    F E  TPILTASSPEGARDF
Sbjct: 121 PEDTRLKYRFLDLRREKLHNNIMLRGRIIDSIRTRMKQGGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ ++ME VLRGVFEEF+NG  V+  F RI + +A+ +YG+DKPDLRNP+I+ 
Sbjct: 241 MSFVTQEDVFDSMEPVLRGVFEEFANGKAVTQKFPRIPFREAMLKYGSDKPDLRNPLIIV 300

Query: 301 NVTEHFVHS--EFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           +++  F      F+ F        G  V  IPA G     R+F D++N+WARS+G PGL 
Sbjct: 301 DLSAEFEGEGVTFKAFR-------GKTVRGIPAPGAASQPRSFFDKLNDWARSEGAPGLG 353

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI +  DE G + G GP+AK +      AI  +  ++ GD+ FF AG+       A  AR
Sbjct: 354 YIIFE-DEGGALVGKGPIAKFIPADAQAAIAAKAGVKAGDAVFFSAGEETAAAKLAGMAR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             I  ELG+   + FEFCWI+DFP YEWNE++KKIDF+HNPF+MPQGGME+L+  D L I
Sbjct: 413 IRIGNELGLSKKDVFEFCWIVDFPMYEWNEDDKKIDFSHNPFSMPQGGMEALEEKDPLDI 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+QYD+VCNG E++SG IRNH  E+M +AF   G  ++V+  +FGG+YRAFQ G PPHG
Sbjct: 473 LAYQYDIVCNGVELSSGAIRNHRPEIMKKAFEIAGYGEDVLIEKFGGMYRAFQYGAPPHG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DRIVMLL   +N+REV+LFPM+Q   DLLMG+PS  +++QLREL +R+
Sbjct: 533 GIAPGVDRIVMLLAEEENLREVTLFPMNQRAEDLLMGAPSDATMKQLRELHIRL 586


>gi|114762107|ref|ZP_01441575.1| aspartyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114545131|gb|EAU48134.1| aspartyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 593

 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/594 (56%), Positives = 431/594 (72%), Gaps = 6/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C  L   +VG  VRLSGWVHR+R HGGI+F+D+RDHYG+TQV+ +PDS  F 
Sbjct: 1   MHAYRTHTCAALTKENVGETVRLSGWVHRIRDHGGILFIDLRDHYGMTQVLCDPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR+EW + IDG+V +R AE +N  + TG+IE+  + IE+L  A+ELPL VFGE+EY
Sbjct: 61  EVEKVRAEWCIRIDGVVKARDAELVNPKLPTGEIEVFVRDIEVLGTAKELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + + +  R+ +++SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREEMQRAMTLRSDVVSSMRRRMWDKGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQ +KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQLFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN--NFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q D+ +T+  V+ G+FEEF  G  V +  ++ +I Y +A  +YGTDKPDLRNPI 
Sbjct: 241 MSFVSQQDVFDTISPVIAGIFEEFGEGAKVDDPASWPQIPYHEAALKYGTDKPDLRNPIE 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M +V+EHF  S F +F+K+L  + G E+ AIPA   GG+R FCDRMN +A+ +G PG+ Y
Sbjct: 301 MQDVSEHFRGSGFAIFAKLLEQD-GTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IFWR D+   +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  AR+
Sbjct: 359 IFWR-DQGNGLEAAGPLAKNIGPERTEAIRQQLGLDVGDAAFFLGGKPSGFQRVAGKARD 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I +EL + + N F F WI+DFP YE +EE   IDF HNPF+MPQGG E+L G D L++K
Sbjct: 418 VIGEELNLTDKNRFAFAWIVDFPIYEKDEETGAIDFEHNPFSMPQGGAEALDG-DPLAVK 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            FQYDL CNG+E+ SG IRNH  EVML+AF   G  ++ V+ RF GLY AFQ G PPHGG
Sbjct: 477 GFQYDLACNGYELVSGAIRNHKPEVMLKAFEIAGYGEDEVKKRFAGLYTAFQYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            AAGIDRIVMLL G  N+REV +FPM+Q   DL+M +PS  S +QL EL LR++
Sbjct: 537 CAAGIDRIVMLLAGTSNIREVIMFPMNQRAEDLMMQAPSEPSSDQLMELSLRVI 590


>gi|254511105|ref|ZP_05123172.1| aspartyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221534816|gb|EEE37804.1| aspartyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 591

 Score =  698 bits (1801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/592 (55%), Positives = 432/592 (72%), Gaps = 4/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C  L  ++VG  VRLSGWVHRVR HGG++F+D+RDH+G+TQV+ + DSA F 
Sbjct: 1   MHAYRSHTCAALTAANVGETVRLSGWVHRVRDHGGVLFIDLRDHFGVTQVLCDGDSAAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R  E +N  + TG+IE+  +++E+L  A+ELPL VFG++EY
Sbjct: 61  ELEKVRSEWCIRIDGTVKARDPELVNPKLPTGEIEIYVRELEVLGAADELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N+  R+ +++SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREAMQQNMTLRSDVVSSMRKRMWDQGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ VL GVFEEF  G  V  ++ +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVLTGVFEEFGGGRKVDQDWPQISYKDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F +F+K+L  + G E+ AIPA   GG+R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSDHFRGSGFAIFAKLLEQD-GTEIRAIPAP-SGGSRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR D+   +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  AR+ I
Sbjct: 359 WR-DQGQGMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKAFEKVAGKARDVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +   + F F WI+DFP YE +EE   IDF HNPF+MPQGGME+L+G D L ++ +
Sbjct: 418 GEELNLTEKDRFAFAWIVDFPIYEQDEETGAIDFEHNPFSMPQGGMEALQG-DPLDVRGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+ML+AF   G  ++ V++RFG L+ AF  G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHKPEIMLKAFELAGYGEDEVKSRFGALFNAFHYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDRIVMLL    N+REV +FPM+Q   DL+M +PS  + +QL ELGLRI+
Sbjct: 537 AGIDRIVMLLADEANIREVMMFPMNQRAEDLMMDAPSDPTSDQLMELGLRII 588


>gi|89055657|ref|YP_511108.1| aspartyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|122999376|sp|Q28MH9|SYD_JANSC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|88865206|gb|ABD56083.1| aspartyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 591

 Score =  697 bits (1800), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/592 (56%), Positives = 429/592 (72%), Gaps = 4/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+HSC  L  ++VG  +RLSGWVHR R HGG+IF+D+RDH+GITQ++ +PDS  F 
Sbjct: 1   MHAYRSHSCAALTAANVGETIRLSGWVHRRRDHGGVIFIDLRDHFGITQILCDPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R+E+ + IDG V +R+ E +N  + TG+IE+  + +E+L  A ELPL VFG++EY
Sbjct: 61  EVEKLRAEFCIRIDGEVKARAPELVNEKLPTGEIEVYIRDMEVLGAAGELPLQVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYR+LDLRR+ +  N++ R+ ++ S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLKYRYLDLRREKMQTNMMLRSDVVASIRKRMWDKQFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR + G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRQHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T+E VLRGVFEEF +G TV   +  I Y DA   YGTDKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIEPVLRGVFEEFGDGATVDQQWPLISYADAALWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L    G +V AIPA   GG+R FCDRMN++A+ QG PG+ YIF
Sbjct: 301 IVSEHFAGSGFAIFAKLLE-QEGTQVRAIPAP-KGGSRKFCDRMNKFAQEQGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR D+   +   GP+AK++    TEAIR +LD+  GD+ FF+AG P +F + A  AR+ I
Sbjct: 359 WR-DQGEGMEAAGPLAKNIGPERTEAIRQQLDLGVGDAAFFLAGKPSQFEAVAGRARSVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             ELG+   N F F WI+DFP +E +EE  KIDF+HNPF+MPQGG+ +L G D LS+  +
Sbjct: 418 GDELGLTEQNRFAFAWIVDFPMFEADEETGKIDFSHNPFSMPQGGLAALDG-DPLSVLGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G   + V  RFGG+  AFQ G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHQPEIMFKAFEVAGYGADEVRKRFGGMVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDRIVMLL    N+REV LFPM+Q   DL+M +PS    +QL ELGLR++
Sbjct: 537 AGIDRIVMLLADTANIREVILFPMNQRAEDLMMNAPSEPMPDQLMELGLRVL 588


>gi|254475910|ref|ZP_05089296.1| aspartyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214030153|gb|EEB70988.1| aspartyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 594

 Score =  697 bits (1799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/594 (56%), Positives = 429/594 (72%), Gaps = 6/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  S VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS  F 
Sbjct: 1   MHAYRSHTCAELNKSHVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R    +N  I TG+IE+  + IE L  +EELPL VFGE+EY
Sbjct: 61  EIEKVRSEWCIRIDGTVKARDESLVNPKIPTGEIEVFIRDIEFLGQSEELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ +  N++ R+ +I S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQNNMLLRSNMIRSIRNRMWDQGFNEYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTV--SNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q D+ +T+  V+ GVFEEF  G  V  ++ + +I Y DA   YG+DKPDLRNPI 
Sbjct: 241 MSFVTQQDVFDTIAPVIAGVFEEFGKGRKVDAADEWPQISYKDAALWYGSDKPDLRNPIK 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M  V+EHF  S F +F+K+L    G E+ AIPA   GG+R FCDRMN++A+ +G PG+ Y
Sbjct: 301 MQVVSEHFAGSGFAIFAKLLE-QEGTEIRAIPAP-TGGSRKFCDRMNKFAQGEGLPGMGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IFWR    G  A  GP+AK++    TEAIR +L +  GD+ FF+ G P  F + A  ARN
Sbjct: 359 IFWREGADGMEAA-GPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKSFEAVAGRARN 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I +ELG+I+ + F F WI+DFP YE +EE  KIDF HNPF+MPQGGM++L   D L++K
Sbjct: 418 VIGEELGLIDKDRFAFAWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALLA-DPLAVK 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            +QYDL CNG+E+ SG IRNH  E+M +AF   G  KE VE RFGG+  AFQ G PPHGG
Sbjct: 477 GYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            AAGIDR+VMLL    N+REV +FPM+Q   DL+M +PS    +QL ELGLR++
Sbjct: 537 CAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMSAPSEPMNDQLMELGLRVI 590


>gi|99080476|ref|YP_612630.1| aspartyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|123379042|sp|Q1GIZ8|SYD_SILST RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|99036756|gb|ABF63368.1| aspartyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 594

 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/594 (57%), Positives = 427/594 (71%), Gaps = 6/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH +R+H+C +L  S VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS  F 
Sbjct: 1   MHAFRSHTCAELNKSHVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R    +NA I TG+IE+  + IE+L  +EELPL VFGE+EY
Sbjct: 61  EIEKVRSEWCIRIDGEVKARDESLVNAKIPTGEIEVFIRDIEVLGKSEELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N+V R+ +I S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQRNMVLRSNMIRSIRNRMWDQGFNEYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q D+ +T+  V+ GVFEEF  G  V   N + +I Y DA   YG+DKPDLRNPI 
Sbjct: 241 MSFVTQQDVFDTIAPVIAGVFEEFGQGRKVDAPNEWPQISYKDAALWYGSDKPDLRNPIK 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M  V+EHF  S F +F+K+L    G E+ AIPA   GG+R FCDRMN +A+ +G PG+ Y
Sbjct: 301 MQVVSEHFRGSGFAIFAKLLE-QEGTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IFWR    G  A  GP+AK++    TEAIR +L +  GD+ FF+ G P  F + A  ARN
Sbjct: 359 IFWREGADGMEAA-GPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKTFEAVAGRARN 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I +EL + + + F F WI+DFP YE +EE  KIDF HNPF+MPQGGM++L G D L ++
Sbjct: 418 VIGEELNLTDKDRFAFAWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALNG-DPLDVR 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
             QYDL CNG+E+ SG IRNH  E+M +AF   G  KE VE RFGG+  AFQ G PPHGG
Sbjct: 477 GNQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            AAGIDR+VMLL    N+REV +FPM+Q   DL+M +PS    EQL ELGLR++
Sbjct: 537 CAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMAAPSEPMSEQLMELGLRVI 590


>gi|254488012|ref|ZP_05101217.1| aspartyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214044881|gb|EEB85519.1| aspartyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 616

 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/616 (55%), Positives = 431/616 (69%), Gaps = 27/616 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL   +VG  VRLSGWVHRVR HGGI+F+D+RDHYGITQV+ +PDS  F 
Sbjct: 1   MHPYRSHTCADLSKENVGDKVRLSGWVHRVRDHGGILFIDLRDHYGITQVLCDPDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R+ + +NA I TG+IE+  + IE+L  ++ELPL VFG++EY
Sbjct: 61  DVEKVRSEWCIRIDGEVKARADDLVNAKIPTGEIEVFVRDIEVLGASKELPLQVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ +  N+V R+ +++S+R RM    F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQANMVLRSDVVSSIRKRMWDRKFKEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ VL G+FEEF  G +V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVLTGIFEEFGGGKSVDQEWPQISYKDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L    G ++ AIPA   GG+R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSEHFAGSGFAIFAKLLE-QEGTQIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVA---------------------GM---GPVAKHLNIVNTEAIRVRLDMQDG 396
           WR   + +VA                     GM   GP+AK++    TEAIR +L +  G
Sbjct: 359 WREKTADSVAQELGIPVKEAQAKLKSGEVEGGMEAAGPLAKNIGPERTEAIRQQLGLSVG 418

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+ FF+ G P  F   A  ARN I  ELG+ + N F F WI+DFP YE + E  KIDF H
Sbjct: 419 DAAFFLGGKPKAFEGVAGRARNVIGSELGLTDENRFAFAWIVDFPIYEKDAETGKIDFEH 478

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           NPF+MPQGGM++L G D L +  +QYDL CNG+E+ SG IRNH  E+M +AF   G  K+
Sbjct: 479 NPFSMPQGGMDALMG-DPLEVLGYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKD 537

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
            VE RFGG+  AFQ G PPHGG AAGIDRIVMLL    N+REV LFPM+Q   DL+M +P
Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRIVMLLAEEANIREVILFPMNQRAEDLMMNAP 597

Query: 577 STVSVEQLRELGLRIV 592
           +    +QL ELGLR++
Sbjct: 598 NDPMPDQLMELGLRVI 613


>gi|85705180|ref|ZP_01036280.1| aspartyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85670502|gb|EAQ25363.1| aspartyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 591

 Score =  695 bits (1794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/592 (55%), Positives = 434/592 (73%), Gaps = 4/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+HSC DL  SDVG  VRL+GWVHR+R HGG++F+D+RDHYG+TQ++ +PDS  F 
Sbjct: 1   MHAYRSHSCADLTKSDVGGDVRLAGWVHRIRDHGGVLFIDLRDHYGVTQLICDPDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +RSE+ + IDG+V +R+   INA I TG+IE+  +++E+L  + ELPL VFG++EY
Sbjct: 61  RVEKLRSEFCIRIDGVVKARAEGLINAKIPTGEIEVFVRELEVLGASNELPLQVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R ++R+LDLRR+ + +N+V R+ ++ +MR RM    F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRFRYLDLRREAMQRNMVLRSDVVAAMRRRMWDRGFREFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ V++G+FEEF  G  V  ++ +I Y D+   YGTDKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVIQGIFEEFGAGAVVDTDWPQISYADSALWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F +F+K+L  + G E+ AIPA   GG+R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 DVSEHFRGSGFAIFAKLLEQD-GTEIRAIPAP-KGGSRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +  G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  AR  I
Sbjct: 359 WR-ETDGVMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPQAFERVAGKARTVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             ELG+ + N F F WI+DFP YE +E   K+DF+HNPF+MPQGG+E+L G D L +  +
Sbjct: 418 GDELGLTDQNRFAFAWIVDFPMYEADENTGKVDFSHNPFSMPQGGIEALNG-DPLKVLGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  ++M++AF   G  ++ V  RFGG+  AFQ G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHKLDIMIKAFELAGYGEDEVRKRFGGMVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDRIVMLL G  N+REV +FPM+Q   DL+M +PS  + +QL ELGLR++
Sbjct: 537 AGIDRIVMLLAGTSNIREVIMFPMNQRAEDLMMNAPSDPTSDQLMELGLRVI 588


>gi|126733315|ref|ZP_01749062.1| aspartyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126716181|gb|EBA13045.1| aspartyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 617

 Score =  695 bits (1794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/616 (55%), Positives = 427/616 (69%), Gaps = 27/616 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL  ++VG  VRLSGWV+RVR HGGI+F+D+RDHYGITQV+ +PDSA F 
Sbjct: 1   MHAYRSHTCADLTAANVGDTVRLSGWVNRVRDHGGILFIDLRDHYGITQVLCDPDSAAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R  E +N  + TG++E+  + IE+L  ++ELPL VFG++EY
Sbjct: 61  DVEKVRSEWCIRIDGEVKARDPELVNTKLPTGEVEVFVRAIEVLGASKELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYR+LDLRR+ +  N+  R+ ++ SMR RM    F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLKYRYLDLRREAMQDNMKLRSDVVASMRRRMWDSGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SG+D+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ V+ G+FEEF  G  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVITGIFEEFGGGRKVDQTWEQISYRDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L    G EV AIPA   GG+R FCDRMN + + +G PG+ YIF
Sbjct: 301 VVSEHFAGSGFAIFAKLLE-QEGTEVRAIPAP-TGGSRKFCDRMNAFVQKEGLPGMGYIF 358

Query: 361 WRLD--------------------ESGNVAG----MGPVAKHLNIVNTEAIRVRLDMQDG 396
           WR                      +SG V G     GP+AK++    TEAIR +L +  G
Sbjct: 359 WREKTADAVAQELGISVKEAQAKLKSGEVEGGMEAAGPLAKNIGPERTEAIRQQLGLGLG 418

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+ FF+ G P  F   A  ARN I  ELG+ + N F F WI+DFP YE +EE  KIDF H
Sbjct: 419 DAAFFLGGKPKAFEGVAGKARNVIGDELGLTDQNRFAFAWIVDFPIYEQDEETGKIDFEH 478

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           NPF+MPQGGM +L G D L +  +QYDL CNG+E+ SG IRNH  E+M +AF   G  K+
Sbjct: 479 NPFSMPQGGMAALDG-DPLKVLGYQYDLACNGYELVSGAIRNHRPEIMFKAFELAGYGKD 537

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
            VE RFGG+  AFQ G PPHGG AAGIDRIVMLL  A N+REV +FPM+Q   DL+M +P
Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRIVMLLADASNIREVIMFPMNQRAEDLMMDAP 597

Query: 577 STVSVEQLRELGLRIV 592
           S    EQLREL LR++
Sbjct: 598 SEPQNEQLRELRLRVL 613


>gi|254459898|ref|ZP_05073314.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206676487|gb|EDZ40974.1| aspartyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 591

 Score =  694 bits (1792), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/592 (57%), Positives = 431/592 (72%), Gaps = 4/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL  S+VG  VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+PDS  F 
Sbjct: 1   MHAYRSHTCADLNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGITQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG VM+R    +N  I TG++E+  + IE+L  A ELPL VFGE+EY
Sbjct: 61  EIEKVRSEWCIRIDGNVMARDESLVNPKIPTGEVEVFIRDIEVLGSASELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYR+LDLRR+ L +N+  R+ ++ SMR RM  +NF E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLKYRYLDLRREKLQRNMTLRSDVVASMRKRMWDQNFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR + G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRQHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+ NT++ V+ G+FEEF  G  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVFNTIQPVVGGIFEEFGGGRKVDQTWEQISYKDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L  + G E+ AIPA   GG+R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSEHFAGSGFAIFAKLLEQD-GTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR D+   +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F S A  ARN I
Sbjct: 359 WR-DQGEGMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPSAFESVAGRARNEI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            Q L +I+ + F F WI+DFP YE +EE  KIDF+HNPF+MPQGG+E+L G D L +  +
Sbjct: 418 GQALKLIDEDRFAFAWIVDFPMYEADEETGKIDFSHNPFSMPQGGLEALNG-DPLDVLGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  ++M +AF   G  K+ VE RFGG+  AFQ G PPHGG A
Sbjct: 477 QYDLACNGYELISGAIRNHQPDIMFKAFELAGYGKDEVEKRFGGMVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDRIVMLL    N+REV +FPM+Q   DL+M +PS    +Q+ ELGLR++
Sbjct: 537 AGIDRIVMLLADEANIREVIMFPMNQRAEDLMMNAPSEPMSDQMMELGLRVI 588


>gi|86136523|ref|ZP_01055102.1| aspartyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85827397|gb|EAQ47593.1| aspartyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 617

 Score =  694 bits (1792), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/616 (54%), Positives = 434/616 (70%), Gaps = 27/616 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  S+VG  VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+PDS  F 
Sbjct: 1   MHAYRSHTCAELNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGITQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V++R    +N  + TG+IE+  + IE+L  AEELPL VFGE+EY
Sbjct: 61  EIEKVRSEWCIRIDGNVLARDESLVNDKLPTGEIEVFIRDIEVLGKAEELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N++ R+ ++ S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQQNMLLRSNMVQSIRKRMWDKGFNEYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T++ V++GVFEEF  G  V + + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQQDVFDTIQPVMQGVFEEFGGGRKVDSEWPQISYRDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L    G EV AIPA   GG+R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSEHFAGSGFAIFAKLLE-QEGTEVRAIPAP-KGGSRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WR--------------------LDESGNVA----GMGPVAKHLNIVNTEAIRVRLDMQDG 396
           WR                    L +SG +       GP+AK++    TEAIR +L +  G
Sbjct: 359 WRKQSPDSIAQERGITVKEVNALVKSGEITLGNEAAGPLAKNIGPERTEAIRQQLGLDVG 418

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+ FF+ G P  F   A  ARN I +ELG+ + + F F W++DFP YE +EE  KIDF H
Sbjct: 419 DAAFFLGGKPKAFEGVAGRARNVIGEELGLTDKDRFAFAWVVDFPIYEADEETGKIDFEH 478

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           NPF+MPQGGM++L+GN  L +  +QYDL CNG+E+ SG IRNH  E+M +AF   G  K+
Sbjct: 479 NPFSMPQGGMDALEGNP-LEVLGYQYDLACNGYELVSGAIRNHRPEIMFKAFEIAGYGKD 537

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
            VE RFGG+  AFQ G PPHGG AAGIDR+VMLL    N+REV +FPM+Q   DL+M +P
Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMSAP 597

Query: 577 STVSVEQLRELGLRIV 592
           S    +QL ELGLR++
Sbjct: 598 SEPMSDQLMELGLRVI 613


>gi|148552972|ref|YP_001260554.1| aspartyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|148498162|gb|ABQ66416.1| aspartyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 593

 Score =  694 bits (1791), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/599 (56%), Positives = 428/599 (71%), Gaps = 9/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L   DVGS VRLSGWVHR R HG ++F+D+RDHYG+TQ+V + +S  F 
Sbjct: 2   MHAYRTHNCGQLRAQDVGSQVRLSGWVHRKRDHGNLLFVDLRDHYGLTQIVTDIESEAFR 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R E V+ I G V++R+ E +N N+ TG+IE+ A+++ + S A+ELPLPV GE +Y
Sbjct: 62  QLERLRVESVVTITGDVVARAGEAVNPNLATGEIEIRAREVSVQSTAQELPLPVAGEADY 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YRFLDLRRD +H NIV R+ +I S+R RMI + F E  TPILTASSPEGARDF
Sbjct: 122 PEDIRLRYRFLDLRRDRIHANIVLRSNVIASIRRRMIDQGFTEYQTPILTASSPEGARDF 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQ +KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 182 LVPSRIHPGKFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+   +E VL GVFEEF+NG  V+   F RI Y DA+ RYG+DKPDLRNP+ +
Sbjct: 242 MSFVTQEDVFAAIEPVLHGVFEEFANGRAVTPAPFPRIAYRDAMLRYGSDKPDLRNPLEI 301

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358
            +VTEHF  S F +F++I  V  G  V AIPA G G  +R F D MN+WAR+QG  GL Y
Sbjct: 302 TDVTEHFQGSGFGLFARI--VEGGGVVRAIPAPGAGAKSRKFFDDMNDWARAQGHAGLGY 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +  E+G     GP+AK+     T  +   L +   D  FF AG  L     A  AR 
Sbjct: 360 INIKGGEAG-----GPIAKNHGEEATAKLIAALGLGPDDGVFFAAGKELATAKLAGAART 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +ELG+I    F+FCW++DFP +E++E+ KKIDF+HNPF+MPQG ME+L+  D L I 
Sbjct: 415 RVGEELGLIEQGVFKFCWVVDFPMFEYDEDAKKIDFSHNPFSMPQGEMEALETMDPLDIL 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH  E+M +AF   G S+E VE  F G+  AF+ G PPHGG
Sbjct: 475 AYQYDIVCNGVELSSGAIRNHRPEIMYKAFEIAGYSQEQVEENFSGMLNAFKFGAPPHGG 534

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            A GIDRIVMLL    N+REV LFPM+Q   DL+MG+PS VS++QLREL +R+VE  K+
Sbjct: 535 SAPGIDRIVMLLADEPNIREVVLFPMNQKAEDLMMGAPSQVSLKQLRELNIRVVEQSKQ 593


>gi|56695828|ref|YP_166179.1| aspartyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|62287519|sp|Q5LUX6|SYD_SILPO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56677565|gb|AAV94231.1| aspartyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 593

 Score =  693 bits (1789), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/594 (55%), Positives = 428/594 (72%), Gaps = 6/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C  L  ++VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+ + DSA F 
Sbjct: 1   MHAYRSHTCAALTAANVGETVRLSGWVHRVRDHGGVLFIDLRDHYGVTQVLCDGDSAAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R A+ +N  + TG+IE+  +++E+L  AEELPL VFG++EY
Sbjct: 61  ALEKVRSEWCIRIDGTVKARDADLVNPKLPTGEIEVYVRELEVLGRAEELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ +  N+  R+ ++ SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREAMQANMTLRSDVVASMRRRMWDKGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGRFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q D+ +T+  VL GVFEEF  G  V    ++ +I Y DA + YGTDKPDLRNPI 
Sbjct: 241 MSFVTQQDVFDTIAPVLAGVFEEFGGGRKVDAPQDWPQIAYADAAKWYGTDKPDLRNPIK 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M + +EHF  S F +F+K+L    G E+ AIPA   GG+R FCDRMN +A+ +G PG+ Y
Sbjct: 301 MQDCSEHFRGSGFAIFAKLLE-QEGTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IFWR D+   +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  AR+
Sbjct: 359 IFWR-DQGEGLEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKSFEKVAGKARD 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I  ELG+   + F F WI+DFP YE +EE  +IDF HNPF+MPQGGME+L G D ++++
Sbjct: 418 VIGAELGLTETDRFAFAWIVDFPIYERDEETGEIDFEHNPFSMPQGGMEALNG-DPMAVR 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            +QYDL CNG+E+ SG IRNH  E+ML+AF   G   + V+ RFG L+ AF  G PPHGG
Sbjct: 477 GYQYDLACNGYELVSGAIRNHKPEIMLKAFELAGYGADEVKARFGALFNAFHYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            AAGIDRIVMLL    N+REV +FPM+Q   DL+M +PS  S +QL ELGLR++
Sbjct: 537 CAAGIDRIVMLLADEANIREVMMFPMNQRAEDLMMQAPSEPSSDQLMELGLRVI 590


>gi|254464021|ref|ZP_05077432.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206684929|gb|EDZ45411.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 594

 Score =  693 bits (1788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/594 (56%), Positives = 431/594 (72%), Gaps = 6/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  S+VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS  F 
Sbjct: 1   MHAYRSHTCAELNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R    +N  I TG+IE+  + IE+L  +EELPL VFG++EY
Sbjct: 61  EIEKVRSEWCIRIDGEVKARDESLVNPKIPTGEIEVFIRDIEVLGKSEELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N+V R+ +I S+R RM    F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQRNMVLRSNMIRSIRNRMWDIGFNEYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPADFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTV--SNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q D+ +T+  V+ GVFEEF  G  V  +N + +I Y D+   YGTDKPDLRNPI 
Sbjct: 241 MSFVTQQDVFDTIAPVMAGVFEEFGGGRKVDPANEWPQISYKDSALWYGTDKPDLRNPIK 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M  V++HF  S F +F+K+L  + G E+ AIPA   GG+R FCDRMN +A+ +G PG+ Y
Sbjct: 301 MQVVSDHFRGSGFAIFAKLLEQD-GTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IFWR D +  +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  AR 
Sbjct: 359 IFWR-DGAEGMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKTFEGVAGKART 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I +ELG+I+ + F F WI+DFP YE +EE  +IDF HNPF+MPQGGM++L  +D L++K
Sbjct: 418 VIGEELGLIDKDRFAFAWIVDFPIYEKDEETGRIDFEHNPFSMPQGGMDALL-SDPLAVK 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            +QYDL CNG+E+ SG IRNH  E+M +AF   G  ++ V+ RFGG+  AFQ G PPHGG
Sbjct: 477 GYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVKKRFGGMVNAFQYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            AAGIDR+VMLL    N+REV +FPM+Q   DL+M +PS    EQL ELGLR++
Sbjct: 537 CAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMAAPSEPMAEQLMELGLRVI 590


>gi|83952777|ref|ZP_00961507.1| aspartyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83835912|gb|EAP75211.1| aspartyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 594

 Score =  692 bits (1786), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/594 (55%), Positives = 435/594 (73%), Gaps = 6/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL    VG  VRL+GWVHR+R HGG++F+D+RDHYGITQV+ +PDS  F 
Sbjct: 1   MHAYRSHTCADLNKDHVGQTVRLAGWVHRIRDHGGVLFVDLRDHYGITQVLCDPDSPVFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +RSEW + IDG V +R+   IN  + TG+IE+  + +E+L  A+ELPL VFG++EY
Sbjct: 61  QVEELRSEWCVRIDGEVKARAESLINPKLPTGEIEVYIRDVEVLGRAQELPLLVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N+  R+ ++ S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREAMQRNMTLRSDVVASIRRRMWDQKFREFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFVEQ D+ +T+  V+ GVFEEF  G  V    ++ +I Y  A+ +YGTDKPDLRNPI 
Sbjct: 241 MSFVEQQDVFDTVAPVIAGVFEEFGGGRKVDAPGDWPQIPYASAMLKYGTDKPDLRNPIE 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M +V+EHF  S F +F+K+L  + G E+ AIPA   GG+R FCDRMN +A+ +G PG+ Y
Sbjct: 301 MQDVSEHFRGSGFAIFAKLLEQD-GTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IFWR  E+G  A  GP+AK++    TEAIR +L + +GD+ FF+ G P  F   A  AR+
Sbjct: 359 IFWRAGENGMEAA-GPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPDAFQRVAGKARD 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I +ELG+ + + F F WI+DFP YE +EE  +IDF HNPF+MPQGGM +L G D L++K
Sbjct: 418 VIGEELGLTDQDRFAFAWIVDFPIYEKDEETGEIDFEHNPFSMPQGGMAALDG-DPLAVK 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            +QYDL CNG+E+ SG IRNH  E+ML+AF   G  ++ V++RFG L+ AF  G PPHGG
Sbjct: 477 GWQYDLACNGYELVSGAIRNHKPEIMLKAFELAGYGEDEVKSRFGALFNAFHYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            AAGIDRIVMLL   +N+REV +FPM+Q   DL+M +PS  + +QL ELGLR++
Sbjct: 537 CAAGIDRIVMLLANQENIREVIMFPMNQRAEDLMMNAPSEPTSDQLMELGLRVM 590


>gi|84685295|ref|ZP_01013193.1| aspartyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84666452|gb|EAQ12924.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 592

 Score =  690 bits (1781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/596 (55%), Positives = 430/596 (72%), Gaps = 5/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL  ++VG  +RLSGWVHRVR HGG++F+D+RDHYG+TQ++A+ DS  F 
Sbjct: 1   MHAYRSHTCADLTKANVGDTIRLSGWVHRVRDHGGVLFIDLRDHYGVTQILADEDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +RSE+ + IDG V++R    +N  + TG+IE+  Q +E+L  A+ELPL VFG++EY
Sbjct: 61  EVEKLRSEYCIRIDGKVLARDDSLVNPKLPTGEIEVFIQDMEVLGAAQELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +NI  R+ +I SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREEMQRNITLRSDVIASMRKRMWDQGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQ +KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQLFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ DI +T++ V++GVFEEF  G  V   + +I Y D+   YGTDKPDLRNPI M 
Sbjct: 241 MSFVEQQDIFDTIQPVIQGVFEEFGGGRKVDTTWEQISYADSALWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L  + G E+ AIPA  GGG+R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSEHFAGSGFAIFAKLLEQD-GTEIRAIPAP-GGGSRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  ++G  A  GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  AR  I
Sbjct: 359 WRDGDNGMEAA-GPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPESFERVAGKARTVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+ + + F F WI+DFP YE +EE   IDF+HNPF+MPQ  ++ L G D L++  +
Sbjct: 418 GEELGLTDMDRFAFAWIVDFPMYENDEETGDIDFSHNPFSMPQ-NLDDLDG-DPLAVLGY 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  EVM + F   G  ++ V  RFGGL  AFQ G PPHGG A
Sbjct: 476 QYDLACNGYELISGAIRNHKREVMFRVFEKAGYGQDEVLKRFGGLATAFQYGAPPHGGCA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDRIVMLL    N+REV +FPM+Q   DL+M +PS  + EQLREL LR++E PK
Sbjct: 536 AGIDRIVMLLADEANIREVMMFPMNQRAEDLMMDAPSEPTNEQLRELSLRVIEQPK 591


>gi|149200875|ref|ZP_01877850.1| aspartyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149145208|gb|EDM33234.1| aspartyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 593

 Score =  690 bits (1781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/594 (55%), Positives = 430/594 (72%), Gaps = 6/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+HSC DL  +DVG+ VRL+GWVHR+R HGG++F+D+RDHYG+TQ++ +PDS  F 
Sbjct: 1   MHAYRSHSCADLTKTDVGADVRLAGWVHRIRDHGGVLFIDLRDHYGVTQLICDPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +RSE+ + IDG V +R A  INA I TG+IE+  + +EIL  A ELPL VFG++EY
Sbjct: 61  QVEKLRSEYCIRIDGAVKARDAGLINAKIPTGEIEVFIRDMEILGSAAELPLQVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N+V R+ ++ +MR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREAMQRNMVLRSDVVAAMRRRMWDKGFREFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFVEQ D+ +T+  V+ GVF+EF    TV     + +I Y D+   YGTDKPDLRNPI 
Sbjct: 241 MSFVEQQDVFDTIAPVIAGVFQEFGGDKTVDAPEAWPQISYADSALWYGTDKPDLRNPIK 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M +V+EHF  S F +F+K+L  + G E+ AIPA   GG+R FCDRMN +A+ +G PG+ Y
Sbjct: 301 MQDVSEHFRGSGFAIFAKLLEQD-GTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I WR +  G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  AR 
Sbjct: 359 ILWR-EADGAMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPAAFERVAGKART 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I  ELG+ + N F F WI+DFP YE +E   K+DF+HNPF+MPQGG+++L G D L + 
Sbjct: 418 VIGDELGLTDQNRFAFAWIVDFPMYEADETTGKVDFSHNPFSMPQGGIDALSG-DPLKVL 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            +QYDL CNG+E+ SG IRNH  ++M++AF   G  +E V  RFGG+  AFQ G PPHGG
Sbjct: 477 GYQYDLACNGYELVSGAIRNHKLDIMIKAFELAGYGEEEVRKRFGGMVNAFQYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            AAGIDRIVMLL G  N+REV +FPM+Q   DL+M +PS  + +QL ELGLRI+
Sbjct: 537 CAAGIDRIVMLLAGTSNIREVIMFPMNQRAEDLMMNAPSDPTSDQLMELGLRII 590


>gi|296445173|ref|ZP_06887133.1| aspartyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296257347|gb|EFH04414.1| aspartyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 592

 Score =  689 bits (1778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/594 (56%), Positives = 431/594 (72%), Gaps = 11/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  +D G  +RLSGW HR+R HGG++F+D+RDHYG+TQ V +PDS  F+
Sbjct: 1   MHRYRSHNCGELREADAGQKIRLSGWCHRIRDHGGVLFVDLRDHYGLTQCVVDPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSEWV  +DG V  R A T N ++ TG +E+   +IE+L  A ELPLPVFG+  Y
Sbjct: 61  DAEKLRSEWVARLDGEVRKRPAGTENPDMPTGLVEVYVTEIEVLGPAAELPLPVFGDLPY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YRFLDLRR+ LH NI+ R  +I+S+R RM    F E  TPILTASSPEGARDF
Sbjct: 121 PEETRLRYRFLDLRREKLHANIMLRGAVIDSLRRRMKERGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRMHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   +E VLRGVFEEF  G  V+  F +I + DA+ +YG+DKPDLRNP+I+ 
Sbjct: 241 MSFVTQEDVFAAVEPVLRGVFEEFGEGKPVTQVFPKIAFRDAMLKYGSDKPDLRNPLIIA 300

Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           +V+  F   +  F+ F        G  V AIPA G     R+F D++N+WARS+G PGL 
Sbjct: 301 DVSAEFARDDVSFKAFK-------GKVVRAIPAPGAAAQPRSFFDKLNDWARSEGAPGLG 353

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI +  +E+G + G GP+AK +      A+  +  ++ GD+ FF AG+ LK    A  AR
Sbjct: 354 YIIFD-EENGALVGKGPIAKFIPPEALAALAAKGGVKAGDALFFSAGEELKAAKLAGAAR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             I  ELG+   + FEFCWI+DFP YEWNE++KKIDF+HNPF+MPQGG+E+L+  + L +
Sbjct: 413 LRIGSELGLCKTDVFEFCWIVDFPMYEWNEDDKKIDFSHNPFSMPQGGLEALETRNSLDL 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            AFQYD+VCNG E++SG IRNH  +VM +AF   G  +EV+  +FGG+YRAFQ G PPHG
Sbjct: 473 LAFQYDIVCNGIELSSGAIRNHRPDVMKKAFEIAGYGEEVLLEKFGGMYRAFQYGAPPHG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DRIVMLL G +N+REV LFPM+Q   DLLMG+PS  + +QLREL +R+
Sbjct: 533 GIAPGVDRIVMLLAGEENLREVVLFPMNQRAEDLLMGAPSEATPKQLRELHIRL 586


>gi|254441702|ref|ZP_05055195.1| tRNA synthetase class II (D, K and N) subfamily [Octadecabacter
           antarcticus 307]
 gi|198251780|gb|EDY76095.1| tRNA synthetase class II (D, K and N) subfamily [Octadecabacter
           antarcticus 307]
          Length = 617

 Score =  688 bits (1776), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/618 (54%), Positives = 428/618 (69%), Gaps = 31/618 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL   +VG  VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+PDS  F 
Sbjct: 1   MHAYRSHTCADLNKDNVGDTVRLSGWVHRVRDHGGLLFIDLRDHYGITQVMADPDSPVFG 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR+EW + IDG V +R A  +N  + TG IE+  + IE+L  A ELPL VFG++EY
Sbjct: 61  DIEKVRNEWCIRIDGEVKARDASLVNDKLSTGAIEVFIRDIEVLGAAAELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYR+LDLRR+ + KN+  R+ +++SMR RM  + F E  TPI+T+SSPEGARDF
Sbjct: 121 PEETRLKYRYLDLRREKMQKNMKLRSDVVSSMRKRMWDKGFREFQTPIITSSSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           L+PSR++ G FYALPQAPQQ+KQL+M SG+D+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LIPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ V+ G+FEEF NG  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVITGIFEEFGNGRNVDQTWEQISYRDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L  + G EV AIPA  GGG R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSEHFRDSGFAIFAKLLEQD-GTEVRAIPAPTGGG-RKFCDRMNVFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVA------------------------GMGPVAKHLNIVNTEAIRVRLDMQDG 396
           WR   + ++A                          GP+AK++    TEAIR +L +  G
Sbjct: 359 WRKQSADSIAQERGISVKDVNALIKSGEITLGDEAAGPLAKNIGPERTEAIRQQLGLTVG 418

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+ FF+ G P  F + A  AR  I  ELG+ + N F F WI+DFP YE + E  KIDF H
Sbjct: 419 DAAFFLGGKPKTFEAVAGKARAVIGDELGLTDLNRFAFAWIVDFPIYERDAETGKIDFEH 478

Query: 457 NPFTMPQGGMESLKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
           NPF+MPQGGM +L G   D+L    +QYDL CNG+E+ SG IRNH  E+M +AF   G  
Sbjct: 479 NPFSMPQGGMAALDGKPEDVL---GYQYDLACNGYELVSGAIRNHRPEIMFKAFEIAGFG 535

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
           K+ VE RFGG+  AFQ G PPHGG AAG+DRIVMLL  A N+R+V +FPM+Q   DL+M 
Sbjct: 536 KDEVEKRFGGMVNAFQYGAPPHGGCAAGVDRIVMLLADADNLRDVIMFPMNQRAEDLMMS 595

Query: 575 SPSTVSVEQLRELGLRIV 592
           +PS    EQ+REL LR++
Sbjct: 596 APSEPQNEQMRELRLRVI 613


>gi|297717790|gb|ADI50038.1| aspartyl-tRNA synthetase [Candidatus Odyssella thessalonicensis
           L13]
          Length = 596

 Score =  688 bits (1776), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/593 (56%), Positives = 427/593 (72%), Gaps = 9/593 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CG L   D G  VRLSGWVHR R HG ++F+DIRDHYGITQ V + D+  F+
Sbjct: 1   MHSYRSHTCGQLRKKDAGQTVRLSGWVHRKRDHGNLLFIDIRDHYGITQCVVSTDTPSFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA+SVR+E V+ +DG+V+ R+ +T+N  + TG+IE+    IEILS AE LPL V  + ++
Sbjct: 61  IAESVRNESVIRLDGIVVERAVDTVNPRMDTGEIEIQVSDIEILSTAETLPLQVNSDSDF 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YRFLDLR++ LH+NI+ R+++I S+R RMI + F+E  TPILTASSPEGARDF
Sbjct: 121 PEETRLRYRFLDLRKEKLHQNIILRSQVITSLRRRMIEQGFLEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N GSFYALPQAPQ +KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 181 LVPSRLNPGSFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+   +E VL GVFEEF+ G +V+   F RI Y++++ +YG DKPDLRNPI +
Sbjct: 241 MSFVTQEDVFAAIEPVLYGVFEEFAGGKSVTPYPFPRISYEESMLKYGNDKPDLRNPIEI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +V+E F+ S+F VFS I+S   G  V AIPA       R+F +++N+WAR  G PGL Y
Sbjct: 301 VDVSEIFLGSDFAVFSNIVS--EGGVVRAIPAPNSAAQPRSFFEKLNDWARGMGLPGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +           GP+AK L     E +R   ++++GDS FF++  P      A  AR 
Sbjct: 359 ITFT-----EGTAKGPIAKFLTEERLEKLRAVANLKEGDSVFFVSDKPKIAAKVAGLART 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I Q+L II  N F+FCWI+DFP YE +EE  KIDF+HNPF+MPQGGME+L   D L+IK
Sbjct: 414 RIGQDLKIIENNAFKFCWIVDFPMYEQDEETGKIDFSHNPFSMPQGGMEALLTQDPLTIK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           AFQYD+VCNG E++SG IRNH+ EVM +AF  VG +KE VE RFGGL  AF+ G PPHGG
Sbjct: 474 AFQYDIVCNGIELSSGAIRNHLPEVMYKAFEIVGYTKEDVEKRFGGLLSAFKFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            A G+DRIVM+L    N+REV  FPM+Q   DL+MG+PS V  E+L+EL L +
Sbjct: 534 SAPGVDRIVMVLADEPNIREVIAFPMNQQAQDLMMGAPSIVDKERLKELCLEV 586


>gi|239787493|emb|CAX83963.1| Aspartyl-tRNA synthetase [uncultured bacterium]
          Length = 600

 Score =  686 bits (1770), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/602 (54%), Positives = 432/602 (71%), Gaps = 10/602 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG+L     G+  RLSGWVHR R HG ++F+D+RDHYGITQ V +  S  F+
Sbjct: 1   MHRYRTHTCGELRAPHAGAAARLSGWVHRKRDHGNLLFVDLRDHYGITQAVMDISSPVFQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + +R E V+C+ G V  RSA+T+N  I TG IEL   + E+LSVA+ LP+ V GE+E+
Sbjct: 61  ILEGLRPESVVCLTGTVAERSADTVNPKIPTGAIELKVTEAEVLSVADVLPILVHGEQEF 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+T+H+N++ R+ +I S+R RM+ + FIE  TPILTASSPEGARD+
Sbjct: 121 PEDMRLRYRFLDLRRETVHRNMLLRSNVIASLRRRMLEQGFIEYQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV QDD+ N +E VL GVFEEF+NG  VS   F RI YD+++ +YG+DKPDLRNP+++
Sbjct: 241 MSFVTQDDVFNAIEPVLAGVFEEFANGRQVSKAPFPRIPYDESMLKYGSDKPDLRNPLLI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F++  +++ G  V AIPA G  G  R++ D++NEWAR +G  GL Y
Sbjct: 301 SDVTEAFRASSFGIFAR--NIDKGSVVRAIPAPGAAGKPRSWFDKLNEWARGEGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +   E G   G GP+AK+L      AIR    ++DGD+ FF    P    +FA   R 
Sbjct: 359 IIY---EGGQ--GKGPIAKNLEPARINAIRAATGVKDGDAVFFACDKPDAAAAFAGQVRA 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  EL ++  N F+FCW +DFPFYE + E  KI F+HNPF+MPQGG+E+L   D LS+K
Sbjct: 414 RVCDELDLLEKNVFKFCWTVDFPFYERDPETGKIGFSHNPFSMPQGGLEALNTKDPLSLK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH+ E+M +AF   G  +  VE  FGG+  AF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIELSSGAIRNHLPEIMYRAFEIAGYERAHVETHFGGMLNAFRFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
            A G+DRIVMLL    N+REV LFP +Q   D+LM +P++VS EQLR+L +++ + PK  
Sbjct: 534 AAPGVDRIVMLLADEPNIREVILFPFNQQAQDILMQAPASVSPEQLRDLHIKL-DLPKAK 592

Query: 599 LK 600
           +K
Sbjct: 593 IK 594


>gi|260428921|ref|ZP_05782898.1| aspartyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260419544|gb|EEX12797.1| aspartyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 628

 Score =  683 bits (1763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/628 (52%), Positives = 435/628 (69%), Gaps = 39/628 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C DL   +VG  VRLSGWVHR+R HGGI+F+D+RDHYGITQV+ +PDS  F 
Sbjct: 1   MHAYRTHTCADLKKENVGDTVRLSGWVHRIRDHGGILFIDLRDHYGITQVLCDPDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R    +N  + TG+IE+  +++E+L  A+ELPL VFG++EY
Sbjct: 61  DVEKVRSEWCIRIDGTVKARDESLVNPKLPTGEIEVFVRELEVLGAAKELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +++  R+ ++ SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREEMQRSMTLRSDVVASMRRRMWDKGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SG+D+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN--NFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q D+ +T+  V+ GVFEEF  G +V +  ++ +I Y +A  +YGTDKPDLRNPI 
Sbjct: 241 MSFVTQQDVFDTVSPVIAGVFEEFGGGASVDDPASWPQIPYKEAALKYGTDKPDLRNPIE 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M +V+EHF  S F +F+++L  + G E+ AIPA+  GG+R FCDRMN +A+ +G PG+ Y
Sbjct: 301 MQDVSEHFRGSGFAIFARLLEQD-GTEIRAIPAR-TGGSRKFCDRMNVFAQKEGLPGMGY 358

Query: 359 IFWRLDES--------------------GNV--------------AGMGPVAKHLNIVNT 384
           IFWR  ++                    GN                  GP+AK++    T
Sbjct: 359 IFWRKSDNSVSDEKIARLEREMRQFLKMGNTEEFQKRFDEWASYCEAAGPLAKNIGPERT 418

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYE 444
           EAIR +L +  GD+ FF+ G    F   A  AR+ I +ELG+   N F F WI+DFP YE
Sbjct: 419 EAIRRQLGLGVGDAAFFLGGKAASFQRVAGKARDVIGEELGLTEKNRFAFAWIVDFPIYE 478

Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
            +EE   IDF HNPF+MPQGGME+L+G D L++K FQYDL CNG+E+ SG IRNH  +VM
Sbjct: 479 KDEETGAIDFEHNPFSMPQGGMEALEG-DPLAVKGFQYDLACNGYELVSGAIRNHKPDVM 537

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           L+AF   G  ++ V+ RF GLY AFQ G PPHGG AAGIDRIVMLL G  N+REV +FPM
Sbjct: 538 LKAFELAGYGEDEVKKRFAGLYTAFQYGAPPHGGCAAGIDRIVMLLAGTSNIREVIMFPM 597

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +Q   DL+M +PS  + +QL EL LR++
Sbjct: 598 NQRAEDLMMQAPSEPTSDQLMELSLRVI 625


>gi|170746938|ref|YP_001753198.1| aspartyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170653460|gb|ACB22515.1| aspartyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 625

 Score =  683 bits (1762), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/616 (54%), Positives = 427/616 (69%), Gaps = 22/616 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  SDVG  VRLSGW HR+R HGG++F+D+RDHYG+TQ V + DS  F+
Sbjct: 12  MHRYRSHTCGALRPSDVGQSVRLSGWCHRIRDHGGVLFVDLRDHYGLTQCVIDSDSPAFK 71

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VRSEWV+ IDG V +R A T NA + TG +E+    +E+L  A ELPLPVFG+ EY
Sbjct: 72  AAETVRSEWVVRIDGRVRTRPAGTENAELPTGAVEVYIDDLEVLGPAGELPLPVFGDLEY 131

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YRFLDLRR+ LH NI+KR  II+S+R RM    F E  TPILTASSPEGARD+
Sbjct: 132 PEETRLRYRFLDLRREKLHANIMKRGAIIDSLRRRMREGGFFEFQTPILTASSPEGARDY 191

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 192 LVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 251

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   +E VLRGVFEEF+ G  V+  F RI Y D++ +YG DKPDLRNP+I+ 
Sbjct: 252 MSFVTQEDVFQAVEPVLRGVFEEFAEGKRVTKEFPRITYADSMLKYGVDKPDLRNPLIIA 311

Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           +VT+ F   +  F+ F  +++   G  V AIPA G    +R+F D++N+WARS+G PGL 
Sbjct: 312 DVTDLFAREDVAFKAFKGVIAS--GGVVRAIPATGAAAQSRSFFDKLNDWARSEGAPGLG 369

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+ +  +E+G + G GP+AK +       I  R   + GD+ FF AG   K    A  AR
Sbjct: 370 YVVFE-EENGQLTGKGPIAKFIPAEVQALIAERAGAKAGDAVFFSAGAEGKAAGLAGKAR 428

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL--- 474
             I  ELG+ + + + FCWI DFP YEW+EEEK+IDF+HNPF+MP    E+    DL   
Sbjct: 429 IRIGDELGLCDKDQYAFCWITDFPMYEWSEEEKRIDFSHNPFSMPNIDREAFLALDLDAL 488

Query: 475 -------------LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
                        L IKAFQYD+VCNG E++SG IRNH  +VM +AF+  G   EV+E +
Sbjct: 489 SSEDENGANTKRILDIKAFQYDIVCNGVELSSGAIRNHRPDVMEKAFAIAGYGHEVLEQK 548

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
           FGG+  A + G PPHGGIA G+DRIVMLL    N+REV LFPM+Q   DL+MG+PS  + 
Sbjct: 549 FGGMLNALRMGAPPHGGIAPGVDRIVMLLCNEPNIREVVLFPMNQRAEDLMMGAPSEATP 608

Query: 582 EQLRELGLRIVENPKK 597
           +QLREL +R+    KK
Sbjct: 609 KQLRELHIRLNLPEKK 624


>gi|218532262|ref|YP_002423078.1| aspartyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|254563332|ref|YP_003070427.1| aspartate tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254781740|sp|B7KN33|SYD_METC4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218524565|gb|ACK85150.1| aspartyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|254270610|emb|CAX26613.1| aspartate tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 604

 Score =  682 bits (1760), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/609 (55%), Positives = 427/609 (70%), Gaps = 18/609 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG +  SDVG  VRLSGW HR+R HGG++F+D+RDHYG+TQ V + DS  F+
Sbjct: 1   MHRYRTHTCGAIRPSDVGQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVIDSDSKAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++ RSEWV+ IDG V +R A T NA + TG +E+    +E+L  A ELPLPVFG++EY
Sbjct: 61  AAETARSEWVIRIDGRVRTRPAGTENAELPTGSVEVYIDDLEVLGPAGELPLPVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYRFLDLRR+ LH NI+KR  I++S+R RM    F E  TPILTASSPEGARD+
Sbjct: 121 PEETRLKYRFLDLRREKLHANIMKRGAIVDSLRRRMREGGFFEFQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   +E VLRGVFEEF+ G  V+  F RI Y DA+ +YG DKPDLRNP+I+ 
Sbjct: 241 MSFVTQEDVFQAVEPVLRGVFEEFAGGKRVTKEFPRITYADAMLKYGVDKPDLRNPLIIA 300

Query: 301 NVTEHFVHS--EFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           +VT+ F     EF+ F  +  +  G  V AIPA G  G  R+F D++N+WARS+G PGL 
Sbjct: 301 DVTDEFADDAVEFKAFKGV--IKSGGVVRAIPATGAAGQPRSFFDKLNDWARSEGAPGLG 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI +  +E G + G GP+AK +       I  +   + GD+ FF AG   K    A  AR
Sbjct: 359 YIVFE-EEGGALTGKGPIAKFIPAAIQARIAEKAGAKAGDAVFFAAGTEAKAAGLAGKAR 417

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ---------GGMES 468
             I  EL + + + F FCW++DFP YEWNEE+KKIDF+HNPF+MP          G  +S
Sbjct: 418 IRIGDELKLSDTDQFAFCWVVDFPMYEWNEEDKKIDFSHNPFSMPNFDRDEFLALGEADS 477

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
            K   +L IKAFQYD+VCNG E++SG IRNH  +VM +AF+  G  ++V+E +FGG+  A
Sbjct: 478 EK---ILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRDVLEEKFGGMLNA 534

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
            + G PPHGGIA G+DRIVMLL    N+REV LFPM+Q   DL+MG+P+  + +QLREL 
Sbjct: 535 LRLGAPPHGGIAPGVDRIVMLLCEEPNIREVVLFPMNQRAEDLMMGAPAEATPKQLRELH 594

Query: 589 LRIVENPKK 597
           +R+    KK
Sbjct: 595 IRLNLPEKK 603


>gi|84514462|ref|ZP_01001826.1| aspartyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84511513|gb|EAQ07966.1| aspartyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 592

 Score =  682 bits (1759), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/592 (56%), Positives = 430/592 (72%), Gaps = 4/592 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL  +DVG  VRLSGWV+RVR HGGI+F+D+RDHYGITQV+ +PDSA F 
Sbjct: 1   MHAYRSHTCADLTAADVGKTVRLSGWVNRVRDHGGILFIDLRDHYGITQVLCDPDSAAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +RSE+ + IDG V +R A  +N  + TG+IE+  +++E+L  A+ELPL VFG++EY
Sbjct: 61  DVEKLRSEYCIRIDGEVKARDASLVNPKLPTGEIEVFIREVEVLGAAKELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYR+LDLRR+ +  N+  R+ ++ SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLKYRYLDLRREAMQSNMKLRSDVVASMRRRMWDKGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SG+D+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T++ V+ GVFEEF  G  V   + +I Y DA   YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQQDVFDTIQPVIGGVFEEFGGGRKVDQTWEQISYKDAALWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F +F+K+L  + G E+ AIPA   GG+R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSDHFRDSGFAIFAKLLEQD-GTEIRAIPAP-TGGSRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR D+   +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F + A  AR  I
Sbjct: 359 WR-DQGEGMEAAGPLAKNIGPERTEAIRQQLGLGLGDAAFFLGGKPKAFEAVAGRARTVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             ELG+ + + F F WI+DFP YE + E  KIDF HNPF+MPQGGME+L G D L+++ +
Sbjct: 418 GDELGLTDKDRFAFAWIVDFPIYEQDAETGKIDFEHNPFSMPQGGMEALSG-DPLAVRGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G  ++ V  RFGG+  AFQ G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVRKRFGGMVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           AGIDRIVMLL  A N+REV +FPM+Q   DL+MG+PS    EQLREL LR+V
Sbjct: 537 AGIDRIVMLLADASNIREVIMFPMNQRAEDLMMGAPSEPMNEQLRELRLRVV 588


>gi|163853404|ref|YP_001641447.1| aspartyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163665009|gb|ABY32376.1| aspartyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 614

 Score =  682 bits (1759), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/609 (55%), Positives = 427/609 (70%), Gaps = 18/609 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG +  SDVG  VRLSGW HR+R HGG++F+D+RDHYG+TQ V + DS  F+
Sbjct: 11  MHRYRTHTCGAIRPSDVGQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVIDSDSKAFK 70

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++ RSEWV+ IDG V +R A T NA + TG +E+    +E+L  A ELPLPVFG++EY
Sbjct: 71  AAETARSEWVIRIDGRVRTRPAGTENAELPTGSVEVYIDDLEVLGPAGELPLPVFGDQEY 130

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYRFLDLRR+ LH NI+KR  I++S+R RM    F E  TPILTASSPEGARD+
Sbjct: 131 PEETRLKYRFLDLRREKLHANIMKRGAIVDSLRRRMREGGFFEFQTPILTASSPEGARDY 190

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 191 LVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 250

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   +E VLRGVFEEF+ G  V+  F RI Y DA+ +YG DKPDLRNP+I+ 
Sbjct: 251 MSFVTQEDVFQAVEPVLRGVFEEFAGGKRVTKEFPRITYADAMLKYGVDKPDLRNPLIIA 310

Query: 301 NVTEHFVHS--EFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           +VT+ F     EF+ F  +  +  G  V AIPA G  G  R+F D++N+WARS+G PGL 
Sbjct: 311 DVTDEFADDAVEFKAFKGV--IKSGGVVRAIPATGAAGQPRSFFDKLNDWARSEGAPGLG 368

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI +  +E G + G GP+AK +       I  +   + GD+ FF AG   K    A  AR
Sbjct: 369 YIVFE-EEGGALTGKGPIAKFIPAAIQARIAEKAGAKAGDAVFFAAGTEAKAAGLAGKAR 427

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ---------GGMES 468
             I  EL + + + F FCW++DFP YEWNEE+KKIDF+HNPF+MP          G  +S
Sbjct: 428 IRIGDELKLSDTDQFAFCWVVDFPMYEWNEEDKKIDFSHNPFSMPNFDRDEFLALGEADS 487

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
            K   +L IKAFQYD+VCNG E++SG IRNH  +VM +AF+  G  ++V+E +FGG+  A
Sbjct: 488 EK---ILEIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRDVLEEKFGGMLNA 544

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
            + G PPHGGIA G+DRIVMLL    N+REV LFPM+Q   DL+MG+P+  + +QLREL 
Sbjct: 545 LRLGAPPHGGIAPGVDRIVMLLCEEPNIREVVLFPMNQRAEDLMMGAPAEATPKQLRELH 604

Query: 589 LRIVENPKK 597
           +R+    KK
Sbjct: 605 IRLNLPEKK 613


>gi|240140823|ref|YP_002965303.1| aspartate tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240010800|gb|ACS42026.1| aspartate tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 604

 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/606 (54%), Positives = 424/606 (69%), Gaps = 12/606 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG +  SDVG  VRLSGW HR+R HGG++F+D+RDHYG+TQ V + DS  F+
Sbjct: 1   MHRYRTHTCGAIRPSDVGQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVIDSDSKAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++ RSEWV+ IDG V +R A T NA + TG +E+    +E+L  A ELPLPVFG++EY
Sbjct: 61  AAETARSEWVIRIDGRVRTRPAGTENAELPTGSVEVYIDDLEVLGPAGELPLPVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYRFLDLRR+ LH NI+KR  I++S+R RM    F E  TPILTASSPEGARD+
Sbjct: 121 PEETRLKYRFLDLRREKLHANIMKRGAIVDSLRRRMREGGFFEFQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   +E VLRGVFEEF+ G  V+  F RI Y DA+ +YG DKPDLRNP+I+ 
Sbjct: 241 MSFVTQEDVFQAVEPVLRGVFEEFAGGKRVTKEFPRITYADAMLKYGVDKPDLRNPLIIA 300

Query: 301 NVTEHFVHS--EFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           +VT+ F     EF+ F  +  +  G  V AIPA G  G  R+F D++N+WARS+G PGL 
Sbjct: 301 DVTDEFADDAVEFKAFKGV--IKSGGVVRAIPATGAAGQPRSFFDKLNDWARSEGAPGLG 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI +  +E G + G GP+AK +       I  +   + GD+ FF AG   K    A  AR
Sbjct: 359 YIVFE-EEGGALTGKGPIAKFIPAAIQARIAEKAGAKAGDAVFFAAGTEAKAAGLAGKAR 417

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL------KG 471
             I  EL + + + F FCW++DFP YEWNEE+KKIDF+HNPF+MP    +          
Sbjct: 418 IRIGDELKLSDTDQFAFCWVVDFPMYEWNEEDKKIDFSHNPFSMPNFDRDEFLALGEADS 477

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
             +L IKAFQYD+VCNG E++SG IRNH  +VM +AF+  G  ++V+E +FGG+  A + 
Sbjct: 478 ERILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRDVLEEKFGGMLNALRL 537

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DRIVMLL    N+REV LFPM+Q   DL+MG+P+  + +QLREL +R+
Sbjct: 538 GAPPHGGIAPGVDRIVMLLCEEPNIREVVLFPMNQRAEDLMMGAPAEATPKQLRELHIRL 597

Query: 592 VENPKK 597
               KK
Sbjct: 598 NLPEKK 603


>gi|170740696|ref|YP_001769351.1| aspartyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|238687997|sp|B0UI66|SYD_METS4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|168194970|gb|ACA16917.1| aspartyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 604

 Score =  680 bits (1755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/599 (56%), Positives = 426/599 (71%), Gaps = 10/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  SDVG+ VRLSGW HRVR HGG++F+D+RDHYG+TQ V + DSA F 
Sbjct: 1   MHRYRTHTCGALRPSDVGATVRLSGWCHRVRDHGGVLFIDLRDHYGVTQCVVDADSAAFR 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VRSEWV+ +DG V  R   T NA++ TG +EL    +E+L  A ELP+PVFGE +Y
Sbjct: 61  AAEAVRSEWVIRVDGRVRRRPEGTENADLPTGAVELYITDLEVLGQAVELPMPVFGELDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YRFLDLRR+ LH NI+KR  II+S+R RM    F E  TPILTASSPEGARDF
Sbjct: 121 PEETRLRYRFLDLRREKLHANIMKRGAIIDSLRRRMREGGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   +E VLRGVFEEF+ G  V+  F RI Y +A+ +YG DKPDLRNP+I+ 
Sbjct: 241 MSFVTQEDVFQAVEPVLRGVFEEFAEGWRVTGTFPRIPYAEAMLKYGVDKPDLRNPLIIV 300

Query: 301 NVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
           +VT+ F  +E   F+   SV   G  V AIPA G G   R+F DR+N WAR +G PGL Y
Sbjct: 301 DVTQEF-SAEAVTFNAFKSVIRAGGVVRAIPAPGAGAQPRSFFDRLNNWARGEGAPGLGY 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  +E G ++G GP+AK +      AI  +  ++ GD+ FF AG   K    A  AR 
Sbjct: 360 IVFE-EEGGVLSGRGPIAKFVPPEVQAAIAAKAGLKAGDAVFFAAGVEAKAAGLAGKARI 418

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG------GMESLKGN 472
            I  +LG+ + + F FCWI DFP YEWNE+EK+IDF+HNPF+MP        G++     
Sbjct: 419 RIGDDLGLTDKDQFAFCWITDFPMYEWNEDEKRIDFSHNPFSMPNYDHDGFLGLDPADAE 478

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            +L IKAFQYD+VCNG E++SG IRNH  +VM +AF+  G  +EV+E +FGG+  A + G
Sbjct: 479 TILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGREVLEQKFGGMLNALRMG 538

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            PPHGGIA G+DRIVMLL    N+REV LFPM+Q   DL+MG+PS V+ +QLREL +R+
Sbjct: 539 APPHGGIAPGVDRIVMLLCHEPNIREVVLFPMNQRAEDLMMGAPSEVTPKQLRELHIRL 597


>gi|188583675|ref|YP_001927120.1| aspartyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|238692885|sp|B1ZFX6|SYD_METPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|179347173|gb|ACB82585.1| aspartyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 604

 Score =  679 bits (1752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/606 (55%), Positives = 427/606 (70%), Gaps = 12/606 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  SDVG  VRLSGW HR+R HGG++F+D+RDHYG+TQ V + DS  F+
Sbjct: 1   MHRYRTHTCGALRPSDVGQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVIDSDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++ RSEWV+ IDG V +R A T NA + TG +E+    +E+L  A ELPLPVFG++EY
Sbjct: 61  AAETARSEWVIRIDGRVRTRPAGTENAELPTGSVEVYIDDLEVLGPAGELPLPVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYRFLDLRR+ LH NI+KR  II+S+R RM    F E  TPILTASSPEGARD+
Sbjct: 121 PEETRLKYRFLDLRREKLHANIMKRGAIIDSLRRRMREGGFFEFQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   +E VLRGVFEEF+NG  V+  F RI Y DA+ +YG DKPDLRNP+I+ 
Sbjct: 241 MSFVTQEDVFQAVEPVLRGVFEEFANGKRVTKEFPRITYADAMLKYGVDKPDLRNPLIIA 300

Query: 301 NVTEHFVHS--EFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           +VT+ F     EF+ F  +  +  G  V AIPA G  G  R+F D++N+WARS+G PGL 
Sbjct: 301 DVTDEFADDAVEFKAFKGV--IKSGGVVRAIPATGAAGQPRSFFDKLNDWARSEGAPGLG 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI +  +E G + G GP+AK +       I  +   + GD+ FF AG   K  + A  AR
Sbjct: 359 YIVFE-EEGGALTGKGPIAKFIPPEIQARIAQKAGAKAGDAVFFAAGTEAKAAALAGKAR 417

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL------KG 471
             I  EL + + + F FCW++DFP YEWNEE+KKIDF+HNPF+MP    ++         
Sbjct: 418 IRIGDELKLSDTDQFAFCWVVDFPMYEWNEEDKKIDFSHNPFSMPNYDRDAFLALGEEDA 477

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
             +L IKAFQYD+VCNG E++SG IRNH  +VM +AF+  G  ++V+E +FGG+  A + 
Sbjct: 478 EKILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRDVLEEKFGGMLNALRL 537

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DRIVMLL    N+REV LFPM+Q   DL+MG+P+  + +QLREL +R+
Sbjct: 538 GAPPHGGIAPGVDRIVMLLCEEPNIREVVLFPMNQRAEDLMMGAPAEATPKQLRELHIRL 597

Query: 592 VENPKK 597
               KK
Sbjct: 598 NLPEKK 603


>gi|296284766|ref|ZP_06862764.1| aspartyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 606

 Score =  678 bits (1749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/599 (55%), Positives = 425/599 (70%), Gaps = 11/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C  L  S+VG  VRLSGWVHR R HGG++F+D+RDHYGITQ+VA+ DS    
Sbjct: 1   MHAYRTHTCAQLRESNVGETVRLSGWVHRKRDHGGVLFIDLRDHYGITQIVADEDSEALS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +  S++SE V+ IDG+V +RS ET NAN+ TG IE+ A+   + S+AEELPLPV GE+EY
Sbjct: 61  LLDSLKSESVITIDGVVKARSQETRNANLPTGDIEVFAKSATVQSMAEELPLPVAGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRF+DLRR+ +H NI+ R ++I S+R RMI + F E  TPIL ASSPEGARD+
Sbjct: 121 PEDIRLKYRFVDLRRERVHNNIMLRNKVITSLRRRMIDQGFSEFQTPILGASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQ +KQLLM +GFDRYFQIAPCFRDED R+DR P EFYQLD E
Sbjct: 181 LVPSRLHPGRFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDLRADRSP-EFYQLDFE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+D+   +E VL GVFEEFS G +V+    F RI Y +A+ +YG+DKPDLRNPII
Sbjct: 240 MSFVTQEDVFQAIEPVLAGVFEEFSGGKSVTPAGEFPRIPYAEAMLKYGSDKPDLRNPII 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLA 357
           + +VT HF  S F +F KI  V  G  V AIPA      +R F D MN+WAR +G  GL 
Sbjct: 300 ITDVTHHFEKSGFGIFEKI--VGGGGIVRAIPAPNTNEKSRKFFDEMNDWARREGYSGLG 357

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  +  E G     GP+AK+        +   L + + D  FF AG P +    A  AR
Sbjct: 358 YVTRKGGEFG-----GPIAKNHGPEEMAKLYDELGLGENDGLFFAAGKPKEAEKLAGAAR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + ++L +I   CF+FCWI+DFP +E++E++K+IDF+HNPF+MPQG M++L+  D L I
Sbjct: 413 TRVGEQLELIEQGCFKFCWIVDFPMFEYDEDQKRIDFSHNPFSMPQGEMDALENQDPLEI 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA+QYD+VCNG+E++SG IRNH  ++M +AF   G SKE V+  F G+  AF+ G PPHG
Sbjct: 473 KAWQYDIVCNGYELSSGAIRNHRPDIMYKAFEVAGYSKEDVDANFSGMIEAFKLGAPPHG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G A GIDRIVMLL    N+REV  FPM+Q   DL+MG+PS VS +QLREL +R VE PK
Sbjct: 533 GSAPGIDRIVMLLADEPNIREVIAFPMNQRAQDLMMGAPSIVSPKQLRELSIRTVEQPK 591


>gi|83593407|ref|YP_427159.1| aspartyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|97196835|sp|Q2RSM3|SYD_RHORT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|83576321|gb|ABC22872.1| aspartyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 606

 Score =  677 bits (1747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/603 (55%), Positives = 435/603 (72%), Gaps = 10/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+C  L   +VG  VRLSGWVHR R HG ++F+D+RDHYG+TQVV +  SA F+
Sbjct: 1   MHRYRTHTCEQLRPENVGETVRLSGWVHRKRDHGNLLFVDLRDHYGLTQVVCDVSSAVFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             ++VR+E V+ + G V++R+AET NA + TG IE+ AQ +E+LS +E LP+ V G++EY
Sbjct: 61  TLEAVRAESVVSVTGTVVARTAETANAKLPTGAIEVKAQTVEVLSQSEVLPMQVAGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R  YRFLDLRR+ +H N+V R+++I+S+R RM  + F+E  TPILTASSPEGARDF
Sbjct: 121 PEDMRLTYRFLDLRREDVHANMVLRSKVISSLRRRMTDQGFLEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQ+LM SGFDRYFQ+APCFRDED R+DR PGEFYQLD E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQFKQMLMVSGFDRYFQVAPCFRDEDSRADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+   +E VL GVFEEF     V+   F RI YD+A+ ++G+DKPDLRNP+  
Sbjct: 241 MSFVTQEDVFAAIEPVLVGVFEEFGGDRAVTPAPFPRIPYDEAMLKFGSDKPDLRNPLRN 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTEHF    F +FSK +++  G  V AIPA G  G  R + D++NEWAR  G  GL Y
Sbjct: 301 ADVTEHFADGGFGLFSKQIAL--GSVVRAIPAPGAAGRPRGWYDKLNEWARESGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           + +  +E+G     GP+AK+L     EAIR  LD++ GDS FF    PLK   F+   R 
Sbjct: 359 VVF--EEAGP---KGPIAKNLEPERVEAIRQALDLKAGDSVFFACDKPLKAAKFSGLVRE 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I  +LG+     F FCW +DFP YE NEE  +I+F+HNPF+MPQG ME+L+  D L+IK
Sbjct: 414 RICDDLGLRETGVFRFCWTVDFPMYEMNEETGQIEFSHNPFSMPQGEMEALETMDPLAIK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH+ E+M +AF   G  KE VE RFGG+ RAF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIELSSGAIRNHLPEIMYKAFEIAGYPKEEVEARFGGMLRAFKFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
            A GIDRIVMLL    N+REV LFPM+    DLLM +P+TVS +QL+EL +++ + PKK 
Sbjct: 534 SAPGIDRIVMLLADEPNIREVILFPMNGQAQDLLMQAPNTVSDKQLKELHIKL-DLPKKA 592

Query: 599 LKI 601
           LK+
Sbjct: 593 LKV 595


>gi|241761263|ref|ZP_04759351.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241374170|gb|EER63667.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 596

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/599 (54%), Positives = 423/599 (70%), Gaps = 9/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C  L  ++VG  VRLSGWVHR R HGG++F+D+RDHYG+TQ+VA+ DSA FE
Sbjct: 1   MHAYRTHNCSALRRANVGEKVRLSGWVHRKRDHGGLLFVDLRDHYGLTQIVADSDSAVFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +R E V+ + G V+ R+ E +N N+ TG+IE+ A ++++ S A+ELPLPV GE +Y
Sbjct: 61  KLDQLRLESVITVTGEVVERAPEVVNPNLATGEIEIRASEVDVQSFAQELPLPVAGEADY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YR+LDLRRD LH+NIV R+ +I S+R RMI + F E  TPILTASSPEGARD+
Sbjct: 121 PEDIRLRYRYLDLRRDRLHRNIVLRSNVIASLRRRMIEQGFNEYQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQ +KQL+M +GFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 181 LVPSRVHPGKFYALPQAPQMFKQLMMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+  T+E VL GVFEEF  G TV+   F RI Y DA+  YG+DKPDLRNP+ +
Sbjct: 241 MSFVTQEDVFATIEPVLAGVFEEFGGGKTVTPAPFPRIAYRDAMLYYGSDKPDLRNPLKI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTEHF  S F +F+ +  V  G  V AIPA   G N R F D MN WAR +G  GL Y
Sbjct: 301 SDVTEHFRDSGFGLFAGM--VAKGGVVRAIPAPEAGKNSRKFFDDMNNWAREEGFAGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +  E+G     GP+A++L    T+ +   L + + D  FF AG   +    A  ARN
Sbjct: 359 INIKNGEAG-----GPIARNLGEEATQKLLADLGLGENDGVFFAAGKEGEAARLAGLARN 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + + L +I  + F FCW++DFP +E++EE K++ F+HNPF+MPQGGME+L+  D L I 
Sbjct: 414 RVGELLDLIEKDSFRFCWVVDFPMFEYDEEAKQVIFSHNPFSMPQGGMEALETKDPLDIL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH  E+M +AF   G  + +V+  F G+  AF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIELSSGAIRNHRPEIMYKAFEIAGYDQAMVDENFAGMINAFKYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            A G+DR+VMLL G  N+REV LFPM+Q   DL+MG+P+ VS  QL+EL LRI   P +
Sbjct: 534 AAPGVDRMVMLLAGEPNIREVVLFPMNQKAEDLMMGAPAAVSERQLKELSLRIAVKPTQ 592


>gi|260752796|ref|YP_003225689.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552159|gb|ACV75105.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 596

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/599 (54%), Positives = 423/599 (70%), Gaps = 9/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C  L  ++VG  VRLSGWVHR R HGG++F+D+RDHYG+TQ+VA+ DSA FE
Sbjct: 1   MHAYRTHNCSALRRANVGEKVRLSGWVHRKRDHGGLLFVDLRDHYGLTQIVADSDSAVFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +R E V+ + G V+ R+ E IN N+ TG+IE+ A ++++ S A+ELPLPV GE +Y
Sbjct: 61  KLDQLRLESVITVTGEVVERAPEVINPNLATGEIEIRASEVDVQSFAQELPLPVAGEADY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YR+LDLRRD LH+NIV R+ +I S+R RMI + F E  TPILTASSPEGARD+
Sbjct: 121 PEDIRLRYRYLDLRRDRLHRNIVLRSNVIASLRRRMIEQGFNEYQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQ +KQL+M +GFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 181 LVPSRVHPGKFYALPQAPQMFKQLMMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+  T+E VL GVFEEF  G TV+   F RI Y DA+  YG+DKPDLRNP+ +
Sbjct: 241 MSFVTQEDVFATIEPVLAGVFEEFGGGKTVTPAPFPRIAYRDAMLYYGSDKPDLRNPLKI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTEHF  S F +F+ +  V  G  V AIPA   G N R F D MN WAR +G  GL Y
Sbjct: 301 SDVTEHFRDSGFGLFAGM--VAKGGVVRAIPAPEAGKNSRKFFDDMNNWAREEGFAGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +  E+G     GP+A++L    T+ +   L + + D  FF AG   +    A  ARN
Sbjct: 359 INIKNGEAG-----GPIARNLGEDATKKLLADLGLGENDGVFFAAGKEGEAARLAGLARN 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + + L +I  + F FCW++DFP +E++EE K++ F+HNPF+MPQGGME+L+  D L I 
Sbjct: 414 RVGELLDLIEKDSFRFCWVVDFPMFEYDEEAKQVIFSHNPFSMPQGGMEALETKDPLDIL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH  E+M +AF   G  + +V+  F G+  AF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIELSSGAIRNHRPEIMYKAFEIAGYDQAMVDENFAGMINAFKYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            A G+DR+VMLL G  N+REV LFPM+Q   DL+MG+P+ VS  QL+EL LRI   P +
Sbjct: 534 AAPGVDRMVMLLAGEPNIREVVLFPMNQKAEDLMMGAPAAVSERQLKELSLRIAVKPTQ 592


>gi|103487236|ref|YP_616797.1| aspartyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98977313|gb|ABF53464.1| aspartyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 619

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/599 (54%), Positives = 422/599 (70%), Gaps = 10/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH CG L    VG  VRLSGWVHR R HGG++F+D+RDHYG+TQ+V +   A F 
Sbjct: 27  MHAYRTHHCGQLRAEHVGQTVRLSGWVHRKRDHGGLLFVDLRDHYGLTQIVVDSSDAAFA 86

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +R+E V+ I G V++RSAET+NAN+ TG IE+ A+++ + S A ELP+PV GE+EY
Sbjct: 87  TLDGLRAESVVTITGDVVARSAETVNANLPTGAIEVRAREVAVQSAAAELPMPVAGEQEY 146

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+ LH NI+ R+ +I S+R RM+ + F E  TPILTASSPEGARD+
Sbjct: 147 PEDIRLKYRFLDLRRERLHANIMLRSNVIASLRRRMVEQGFTEYQTPILTASSPEGARDY 206

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQ +KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 207 LVPSRVHPGKFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 266

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV QDD+ N +E VL GVFEEF+NG +V+   +F RI Y +++ +YG DKPDLRNP+I
Sbjct: 267 MSFVTQDDVFNAIEPVLAGVFEEFANGKSVTPAGSFPRIPYRESMLKYGNDKPDLRNPLI 326

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357
           + +V+ HF  S F  F+ I++   G  V AIPA      +R F D MN WA+ +G  GL 
Sbjct: 327 ISDVSAHFTGSGFGRFADIVAA--GDVVRAIPAPATADKSRKFFDDMNSWAQGEGFAGLG 384

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y   +  E G     GP+AK+      +A+   L +   D  FF AG   +    A  AR
Sbjct: 385 YATRKGGEWG-----GPIAKNHGAEKMDALAADLGLGPDDGLFFAAGREAQAAKLAGLAR 439

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A++LG+I+ N FE CWI+DFP +E +EE  KIDF+HNPF+MPQG +E+L+  D L I
Sbjct: 440 TRVAEQLGLIDPNRFEMCWIVDFPMFERDEETGKIDFSHNPFSMPQGELEALETKDPLDI 499

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+QYD+VCNG E++SG IRNH  ++M +AF   G S+  V+  F G+  AF+ G PPHG
Sbjct: 500 LAWQYDIVCNGVELSSGAIRNHRPDIMYKAFEIAGYSQAEVDANFAGMINAFKYGAPPHG 559

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G A G+DRIVMLL    N+REV +FPM+Q   DL+MG+P+ VS +QLRELG+RIV+ PK
Sbjct: 560 GSAPGVDRIVMLLADEPNIREVVVFPMNQKAEDLMMGAPAPVSEKQLRELGIRIVDGPK 618


>gi|56551611|ref|YP_162450.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|62287524|sp|Q5NPM1|SYD_ZYMMO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56543185|gb|AAV89339.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 596

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/599 (54%), Positives = 423/599 (70%), Gaps = 9/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C  L  ++VG  VRLSGWVHR R HGG++F+D+RDHYG+TQ+VA+ DSA FE
Sbjct: 1   MHAYRTHNCSALRRANVGEKVRLSGWVHRKRDHGGLLFVDLRDHYGLTQIVADSDSAVFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +R E V+ + G V+ R+ E +N N+ TG+IE+ A ++++ S A+ELPLPV GE +Y
Sbjct: 61  KLDQLRLESVITVTGEVVERAPEVVNPNLATGEIEIRASEVDVQSFAQELPLPVAGEADY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YR+LDLRRD LH+NIV R+ +I S+R RMI + F E  TPILTASSPEGARD+
Sbjct: 121 PEDIRLRYRYLDLRRDRLHRNIVLRSNVIASLRRRMIEQGFNEYQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQ +KQL+M +GFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 181 LVPSRVHPGKFYALPQAPQMFKQLMMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+  T+E VL GVFEEF  G TV+   F RI Y DA+  YG+DKPDLRNP+ +
Sbjct: 241 MSFVTQEDVFATIEPVLAGVFEEFGGGKTVTPAPFPRIAYRDAMLYYGSDKPDLRNPLKI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTEHF  S F +F+ +  V  G  V AIPA   G N R F D MN WAR +G  GL Y
Sbjct: 301 SDVTEHFRDSGFGLFAGM--VAKGGVVRAIPAPEAGKNSRKFFDDMNNWAREEGFAGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +  E+G     GP+A++L    T+ +   L + + D  FF AG   +    A  ARN
Sbjct: 359 INIKNGEAG-----GPIARNLGEDATQKLLADLGLGENDGVFFAAGKEGEAARLAGLARN 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + + L +I  + F FCW++DFP +E++EE K++ F+HNPF+MPQGGME+L+  D L I 
Sbjct: 414 RVGELLDLIEKDSFRFCWVVDFPMFEYDEEAKQVIFSHNPFSMPQGGMEALETKDPLDIL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH  E+M +AF   G  + +V+  F G+  AF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIELSSGAIRNHRPEIMYKAFEIAGYDQAMVDENFAGMINAFKYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            A G+DR+VMLL G  N+REV LFPM+Q   DL+MG+P+ VS  QL+EL LRI   P +
Sbjct: 534 AAPGVDRMVMLLAGEPNIREVVLFPMNQKAEDLMMGAPAAVSERQLKELSLRIAVKPTQ 592


>gi|217976405|ref|YP_002360552.1| aspartyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|254781742|sp|B8EN55|SYD_METSB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|217501781|gb|ACK49190.1| aspartyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 623

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/622 (53%), Positives = 425/622 (68%), Gaps = 35/622 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CGDL  +D     RLSGW HR+R HGG++F+D+RDHYGITQ V +PDS  F 
Sbjct: 1   MHRYRSHTCGDLRETDALQPTRLSGWCHRIRDHGGVLFIDLRDHYGITQCVVDPDSGAFP 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSEWV+ IDGLV  R A T N  + TG IE+   +IE+L  A ELPLPVFG++ Y
Sbjct: 61  LAEKLRSEWVVRIDGLVRQRPAGTENIEMPTGLIEVYVTEIEVLGAAAELPLPVFGDQNY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ LH NI+ R R+I+S+R RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDMRLRYRFLDLRREKLHNNIMLRGRVIDSLRARMKGQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMTAGFDRYFQIAPCFRDEDLRADR-SLEFYQLDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+DI  T+E VLRGVFEEF  G  V+  F RI Y + + +YGTDKPDLRNP+++ 
Sbjct: 240 MSFVTQEDIFATVEPVLRGVFEEFGEGFAVTPEFPRIPYAETMLKYGTDKPDLRNPLVIV 299

Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           +VTE F   +  F  F  +  +  G  V AIPA G G   R+F D++N+WAR +G  GL 
Sbjct: 300 DVTEEFSREDVSFNAFKNV--IKQGGVVRAIPAPGAGAQPRSFFDKLNDWARGEGAAGLG 357

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+ +  D +G + G GP+AK L     +AI  +  ++ GD+ FF    P +    A  AR
Sbjct: 358 YVIFEGD-AGALVGKGPIAKFLPADVQQAIAAKAGLKSGDAVFFACDRPDRAAKLAGAAR 416

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-------- 469
             I  EL +     FE CWI+DFP YEWNE+EK+IDF+HNPF+MP   +E          
Sbjct: 417 LRIGSELKLSKTGVFELCWIVDFPMYEWNEDEKRIDFSHNPFSMPNCNLEQFLALETGVR 476

Query: 470 ----------------KGNDL----LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                           + N+L    L I AFQYD+VCNGFE++SG IRNH  ++M +AF+
Sbjct: 477 EEIVGIDRGERNRDLNESNELRKRILEITAFQYDVVCNGFELSSGAIRNHRPDIMRKAFA 536

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G  + V+E +FGG+YRAF  G PPHGGIA G+DRIVMLL G +N+RE+  FPM+Q   
Sbjct: 537 LAGYDETVLEQKFGGMYRAFHYGAPPHGGIAPGVDRIVMLLAGEENLREIVAFPMNQRGE 596

Query: 570 DLLMGSPSTVSVEQLRELGLRI 591
           DLL+G+PS V+ +QLREL +++
Sbjct: 597 DLLLGAPSNVTAKQLRELSIKL 618


>gi|148261350|ref|YP_001235477.1| aspartyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|166225312|sp|A5G126|SYD_ACICJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146403031|gb|ABQ31558.1| aspartyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 595

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/597 (54%), Positives = 418/597 (70%), Gaps = 9/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH CG L  +D G   RLSGWV+  R HGG++F+D+RDHYGITQ V    S  F 
Sbjct: 1   MHEYRTHDCGALRAADAGITARLSGWVNVKRDHGGLLFIDLRDHYGITQCVFPAGSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+++R+E V+ + G V+ R A+T+N  + TG+IEL A+ +E+ S A+ LP+ V GE ++
Sbjct: 61  AAEALRAESVITVTGRVVKRDADTVNPRLPTGEIELVAETVEVQSTADVLPIQVAGEAQF 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ LH+NI+ R  +I  +R  M A  F E +TPILTASSPEGARDF
Sbjct: 121 PEELRLRYRFLDLRREKLHRNIMLRANVIAWLRREMTARGFTEFTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPSRVHPGQFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEASRADRAPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+  T+E VL G+F EF  G  V+   F RI YD+A+ +YG+DKPDLRNP+++
Sbjct: 241 MSFVTQEDVFATIEPVLGGLFREFGGGRGVTQWPFPRIAYDEALLKYGSDKPDLRNPLLI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F+KI  V  G  V AIPA G GGN R+F D++N+WARS+G  GL Y
Sbjct: 301 TDVTEAFRDSGFGLFAKI--VAGGGVVRAIPAPGTGGNPRSFFDKLNDWARSEGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D        GP+AK+L     EAIR       GD+ FF AG PL+   FA   R 
Sbjct: 359 IIFAPD-----GAKGPIAKNLEPARAEAIREATGASVGDAVFFAAGKPLEAAKFAGTVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  +LG+I+   FEFCWI+DFP YE +EE  +I F+HNPF+MPQGG+E+L G D L+IK
Sbjct: 414 KLGTDLGLIDGAKFEFCWIVDFPMYERDEETGQIVFSHNPFSMPQGGLEALNGQDPLTIK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           AFQYD+VCNG E++SG IRNH  ++ML+AF   G   E VE RFGG+  AF+ G PPHGG
Sbjct: 474 AFQYDIVCNGVELSSGAIRNHRPDIMLRAFEIAGYGAEEVEARFGGMLNAFRYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            A G+DR+VMLL    N+REV  FP++Q   DLLMG+P+ V   +L+EL L I   P
Sbjct: 534 SAPGVDRMVMLLADEPNLREVIAFPLNQQGQDLLMGAPAPVPAARLKELSLAIALPP 590


>gi|220922152|ref|YP_002497453.1| aspartyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|254781741|sp|B8IUT2|SYD_METNO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219946758|gb|ACL57150.1| aspartyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 604

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/600 (55%), Positives = 425/600 (70%), Gaps = 12/600 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  SDVGS VRLSGW HRVR HGG++F+D+RDHYG+TQ V + DS  F 
Sbjct: 1   MHRYRSHTCGALRPSDVGSTVRLSGWCHRVRDHGGVLFIDLRDHYGLTQCVVDADSPAFR 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VRSEWV+ IDG V  R A T N ++ TG +E+    +E+L  A ELP+PVFG+ +Y
Sbjct: 61  AAEAVRSEWVIRIDGRVRQRPAGTENPDLPTGAVEVYIADLEVLGHAVELPMPVFGDLDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YRFLDLRR+ LH NI+KR  II+S+R RM    F E  TPILTASSPEGARDF
Sbjct: 121 PEETRLRYRFLDLRREKLHANIMKRGAIIDSLRRRMREGGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   +E VLRGVFEEF++G  V+ +F RI Y +A+ +YG DKPDLRNP+++ 
Sbjct: 241 MSFVTQEDVFQAVEPVLRGVFEEFADGWRVTQSFPRIPYAEAMLKYGVDKPDLRNPLLIV 300

Query: 301 NVTEHFVHS--EFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           +VTE F      F  F  ++    G  V AIPA G     R+F D++N+WARS+G PGL 
Sbjct: 301 DVTEEFSAEAVTFNAFKNLIRA--GGVVRAIPAPGAASQPRSFFDKLNDWARSEGAPGLG 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI +  +E G + G GP+AK +      AI  +  ++ GD+ FF AG   K    A  AR
Sbjct: 359 YIVFE-EEGGQLIGRGPIAKFVPAEVQAAIAGKAGLKAGDAVFFSAGTEAKAAGLAGKAR 417

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG------GMESLKG 471
             I  +LG+ + + F FCWI DFP YEWNE+EK+IDF+HNPF+MP         ++    
Sbjct: 418 IRIGDDLGLSDKDQFAFCWITDFPMYEWNEDEKRIDFSHNPFSMPNYDHKAFLALDPADA 477

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           + +L IKAFQYD+VCNG E++SG IRNH  +VM +AF+  G  ++V+E +FGG+  A + 
Sbjct: 478 DTILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRDVLEQKFGGMLNALRM 537

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DRIVMLL    N+REV LFPM+Q   DL+MG+PS V+ +QLREL +R+
Sbjct: 538 GAPPHGGIAPGVDRIVMLLCHEPNIREVVLFPMNQRAEDLMMGAPSEVTAKQLRELHIRL 597


>gi|114800235|ref|YP_760952.1| aspartyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123027890|sp|Q0BZZ1|SYD_HYPNA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|114740409|gb|ABI78534.1| aspartyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 609

 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/605 (54%), Positives = 431/605 (71%), Gaps = 16/605 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG+L  S VG  V++SGW+HR R HGG++F+D+RDHYG+TQ+V NP S  F 
Sbjct: 1   MHAYRTHTCGELRKSHVGETVKISGWLHRRRDHGGVMFIDLRDHYGLTQIVFNPGSPGFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R+E V+ ++G V++R AE +NAN+ TG+IE+    + + S A ELP+PVFG+  Y
Sbjct: 61  TVERLRAESVITVEGKVVARDAELVNANLGTGEIEVVGGAVSVQSEAAELPMPVFGDHSY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR K+R+LDLRR+ LHKN+V R+++I S+R RM+AE F E  TPILTASSPEGARDF
Sbjct: 121 PEEIRLKHRYLDLRREQLHKNMVLRSQVIASLRRRMVAEGFTEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLHPGEFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSN----GNTVSNN-FLRICYDDAIRRYGTDKPDLRN 295
           MSFV Q+D+ N++E V+RGVFEEF++    G  V+   F+ I Y +A+ +YG DKPDLRN
Sbjct: 241 MSFVTQEDVFNSIEPVMRGVFEEFADWEGKGRKVAEGPFVHIPYAEAMLKYGVDKPDLRN 300

Query: 296 PIIMHNVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQG 352
           PI+  +V++  +  +    VF KI  V  G  V AIPA   G   R+F D+M+ WA+ + 
Sbjct: 301 PILCSDVSDIMMRDDVTLAVFKKI--VGGGGIVRAIPAPNSGDQPRSFFDKMDAWAKKEM 358

Query: 353 Q-PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           Q PGL Y+ + ++E+G +   GP+AK        A+  +  ++ GD+ FF AGD      
Sbjct: 359 QAPGLGYMRF-VEENGALTATGPIAKFFEPAALAALAEKAGVKAGDALFFSAGDKTAAVR 417

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
               AR  + +ELGII    F FCWI+DFP YEW+E+ KK+DF+HNPF+MPQGGME+L  
Sbjct: 418 LQGQARIRVGEELGIIEPGVFRFCWIVDFPMYEWDEDNKKVDFSHNPFSMPQGGMEALLA 477

Query: 472 NDL----LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
            D     L +KAFQYD+VCNG E++SG IRNH  EVML+AF   G   EVVE +FGG+  
Sbjct: 478 ADTVEKQLDLKAFQYDIVCNGVELSSGAIRNHRPEVMLKAFELAGYGPEVVEAKFGGMLN 537

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPHGGIA G+DRIVMLL    ++R+V LFPM+Q   DLLMG+PS V   QL+EL
Sbjct: 538 AFRYGAPPHGGIAPGVDRIVMLLAETDSLRDVILFPMNQQARDLLMGAPSPVDERQLKEL 597

Query: 588 GLRIV 592
            +R+ 
Sbjct: 598 NIRLA 602


>gi|326404837|ref|YP_004284919.1| aspartyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325051699|dbj|BAJ82037.1| aspartyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 595

 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/597 (54%), Positives = 417/597 (69%), Gaps = 9/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH CG L  +D G   RLSGWV+  R HGG++F+D+RDHYGITQ V    S  F 
Sbjct: 1   MHEYRTHDCGALRAADAGITARLSGWVNVKRDHGGLLFIDLRDHYGITQCVFPAGSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R E V+ + G V+ R A+T+N  + TG+IEL A+ +E+ S A+ LP+ V GE ++
Sbjct: 61  AAEVLRVESVITVTGRVVKRDADTVNPRLPTGEIELVAETVEVQSTADVLPIQVAGEAQF 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ LH+NI+ R  +I  +R  M A  F E +TPILTASSPEGARDF
Sbjct: 121 PEELRLRYRFLDLRREKLHRNIMLRANVIAWLRREMTARGFTEFTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPSRVHPGQFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEASRADRAPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+  T+E VL G+F EF  G +V+   F RI YD+A+ +YG+DKPDLRNP+++
Sbjct: 241 MSFVTQEDVFATIEPVLGGLFREFGGGRSVTQWPFPRIAYDEALLKYGSDKPDLRNPLLI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F+KI  V  G  V AIPA G GGN R+F D++N+WARS+G  GL Y
Sbjct: 301 TDVTEAFRDSGFGLFAKI--VAGGGVVRAIPAPGTGGNPRSFFDKLNDWARSEGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D        GP+AK+L     EAIR       GD+ FF AG PL+   FA   R 
Sbjct: 359 IIFAPD-----GAKGPIAKNLEPARAEAIREATGASVGDAVFFAAGKPLEAAKFAGTVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  +LG+I+   FEFCWI+DFP YE +EE  +I F+HNPF+MPQGG+E+L G D L+IK
Sbjct: 414 KLGTDLGLIDGAKFEFCWIVDFPMYERDEETGQIVFSHNPFSMPQGGLEALNGQDPLTIK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           AFQYD+VCNG E++SG IRNH  ++ML+AF   G   E VE RFGG+  AF+ G PPHGG
Sbjct: 474 AFQYDIVCNGVELSSGAIRNHRPDIMLRAFEIAGYGAEEVEARFGGMLNAFRYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            A G+DR+VMLL    N+REV  FP++Q   DLLMG+P+ V   +L+EL L I   P
Sbjct: 534 SAPGVDRMVMLLADEPNLREVIAFPLNQQGQDLLMGAPAPVPAARLKELSLAIALPP 590


>gi|85708162|ref|ZP_01039228.1| aspartyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85689696|gb|EAQ29699.1| aspartyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 604

 Score =  666 bits (1718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/600 (54%), Positives = 419/600 (69%), Gaps = 11/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C  L   +VG  VRLSGW+HR R HGG++F+D+RDHYGITQVVA+ DS    
Sbjct: 1   MHAYRSHTCAQLSAENVGETVRLSGWMHRKRDHGGVLFVDLRDHYGITQVVADEDSPALP 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + +R+E V+ IDG V +R+ ET+N ++ TG+IE+ A+ I + S A+ELP+PV    EY
Sbjct: 61  VLEKLRAESVVTIDGEVKARTPETVNKDLPTGEIEIFARSITVQSAADELPMPVASGEEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE+IR KYRFLDLRR+ +H+NI+ R+++I S+R RMI + F E  TPILTASSPEGARDF
Sbjct: 121 PENIRLKYRFLDLRREVMHRNIMLRSQVITSLRQRMIGQGFTEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++  SFYALPQAPQ +KQ+LM SGFDRYFQIAPCFRDED R+DR   EFYQLD E
Sbjct: 181 LVPSRMHPNSFYALPQAPQMFKQMLMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDFE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTV--SNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+D+   +E VL GVFEEFS G TV  S  F RI Y +A+ +YGTDKPDLRNP+I
Sbjct: 240 MSFVTQEDVFQALEPVLAGVFEEFSGGKTVTKSGEFPRIPYAEAMLKYGTDKPDLRNPLI 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLA 357
           + +VT HF  S F +F KI+       V  IPA +    +R F D MN WARS+G  GL 
Sbjct: 300 ISDVTSHFEKSGFGLFEKIVGGG--GVVRVIPAPETNEKSRKFFDDMNNWARSEGFAGLG 357

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  +  E G     GP+AK+      E +   L +   D  FF AG        A  AR
Sbjct: 358 YVTRKGGEFG-----GPIAKNHGPDRMEELYNELGLGPDDGLFFAAGKEKDAAKLAGAAR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IA++L +I  +CF+FCWI+DFP YE++EE KK+DF+HNPF+MPQG ME+L+  D L I
Sbjct: 413 TQIAEQLELIEQDCFKFCWIVDFPMYEYDEEAKKVDFSHNPFSMPQGEMEALESMDPLEI 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA+QYD+VCNG+E++SG IRNH  E+M +AF   G     V+  FGG+  AF+ G PPHG
Sbjct: 473 KAWQYDIVCNGYELSSGAIRNHKPEIMYKAFEIAGYDNATVDKEFGGMIEAFKLGAPPHG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G A GIDRIVMLL G + +REV  FPM+Q   DL+M +PS  +  QLREL LR+VE  +K
Sbjct: 533 GSAPGIDRIVMLLAGEEAIREVIAFPMNQKGEDLMMSAPSKATPAQLRELHLRLVEPAQK 592


>gi|85373620|ref|YP_457682.1| aspartyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|123409673|sp|Q2NBQ6|SYD_ERYLH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|84786703|gb|ABC62885.1| aspartyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 604

 Score =  664 bits (1714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/600 (54%), Positives = 420/600 (70%), Gaps = 11/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C  L   +VG  VRLSGWVH  R HGG++F+D+RDHYGITQ+VA+ DSA   
Sbjct: 1   MHAYRTHNCAALSKKNVGETVRLSGWVHNKRDHGGVLFVDLRDHYGITQIVADEDSAALP 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +   ++ E V+ IDG V +R AE +N N+ TG+IE+ A+ +EI S AEELPL V    +Y
Sbjct: 61  VLDKLKLESVVTIDGDVKARDAEAVNPNLPTGEIEVFARSVEIQSRAEELPLIVNSAEDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRF+DLRR+ LH+NI+ R+++I S+R RM A+ F E  TPIL ASSPEGARD+
Sbjct: 121 PEDVRLKYRFVDLRRERLHRNIMLRSQVITSIRNRMTAQGFTEFQTPILAASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR++ G+FYALPQAPQ +KQLLM +GFDRYFQIAPCFRDED R+DR P EFYQLD E
Sbjct: 181 IVPSRLHPGTFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDLRADRSP-EFYQLDFE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTV--SNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+D+   +E VL GVFEEF+NG +V  S  F RI Y +A+ +YGTDKPDLRNP++
Sbjct: 240 MSFVTQEDVFQAIEPVLAGVFEEFANGKSVTKSGEFPRIPYAEAMLKYGTDKPDLRNPLV 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLA 357
           + +VT+HF  S F +F KI+ +  G  V  IPA      +R F D MN+WAR +G  GL 
Sbjct: 300 ISDVTDHFQSSGFGLFEKIVGI--GGRVRVIPAPNTQEKSRKFFDDMNDWARKEGFAGLG 357

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  +  E G     GP+AK+    N + I   L + + D  FF AG        A  AR
Sbjct: 358 YVTRKQGEFG-----GPIAKNHGPENMQKIYDELGLGENDGLFFAAGKEKDAAKLAGAAR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + +ELG+I   CF+FCWI+DFP +E++EE KKIDF+HNPF+MPQG ME+L+  D L I
Sbjct: 413 TRVGEELGLIEQGCFKFCWIVDFPMFEYDEELKKIDFSHNPFSMPQGEMEALENKDPLEI 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+QYD+VCNG+E++SG IRNH  E+M +AF   G  +E V+  F G+  AF+ G PPHG
Sbjct: 473 LAWQYDIVCNGYELSSGAIRNHKPEIMYKAFEIAGYDRETVDREFSGMIEAFKLGAPPHG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G A GIDRIVMLL    N+REV  FP++Q   DL+MG+PS V  + LR++ +R VE PKK
Sbjct: 533 GSAPGIDRIVMLLADEPNIREVIAFPLNQKAQDLMMGAPSQVPPKALRDVHIRTVEPPKK 592


>gi|162148016|ref|YP_001602477.1| aspartyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786593|emb|CAP56175.1| Aspartyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 613

 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/603 (54%), Positives = 414/603 (68%), Gaps = 10/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTHSC  L  SD G   RLSGWVH  R HGG++F+D+RDH+G+TQ+V    S   E
Sbjct: 15  MHPYRTHSCAALRASDAGQTARLSGWVHSKRDHGGLLFIDLRDHFGMTQIVIPAGSPVLE 74

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR E VL I G V+ R A T N N+ TG+IEL AQ+++I S A+ LP  V G   Y
Sbjct: 75  AVERVRVESVLTITGEVVLRDAATKNPNLPTGEIELRAQQVDIQSSADVLPFQVAGHEHY 134

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R  YR++DLRRD +H+N++ R ++I S+R RM  + F+E  TPILTASSPEGARDF
Sbjct: 135 PEDLRLTYRYIDLRRDKVHRNMMLRAQVIASLRRRMTDQGFVEFQTPILTASSPEGARDF 194

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 195 LVPARMHPGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEAARADRSPGEFYQLDFE 254

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299
           M+F  Q+D+  T+E V+ GVF EF  G TVS   F RI Y  A++ YG+DKPDLRNP+++
Sbjct: 255 MAFATQEDVFATLEPVMEGVFREFGGGRTVSAAPFERIPYATAMKLYGSDKPDLRNPLLL 314

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F +S F +F++I  V  G EV AIPA G G   RAF D++N WAR  G  GL Y
Sbjct: 315 SDVTESFANSGFGLFARI--VADGGEVRAIPAPGAGDRPRAFYDKLNAWAREAGAGGLGY 372

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  DE G   G GP+AK+L      AIR    ++ GD+ FF AG   +   F+   R 
Sbjct: 373 IIF--DEEG---GKGPIAKNLEPARVAAIREATGLKAGDAVFFAAGKGDEVVKFSGLVRT 427

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA EL +I  + F FCWI DFP YE NEE  +IDF+HNPF+MPQGG+E+L G D L+I 
Sbjct: 428 RIATELDLIEQDSFRFCWITDFPMYERNEETGQIDFSHNPFSMPQGGLEALNGQDPLTIT 487

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH  +VM++AF   G     VE RFGG+  AF+ G PPHGG
Sbjct: 488 AYQYDIVCNGVELSSGAIRNHRPDVMIRAFELAGYPASEVEARFGGMLNAFRYGAPPHGG 547

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597
            A G+DRIVMLL    N+REV LFP++Q   DL+MG+P+ V  E+L+EL L + +  PK 
Sbjct: 548 SAPGVDRIVMLLADEPNIREVILFPLNQQGEDLMMGAPAPVPAERLKELSLALNLPRPKP 607

Query: 598 ILK 600
            +K
Sbjct: 608 GVK 610


>gi|209542632|ref|YP_002274861.1| aspartyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530309|gb|ACI50246.1| aspartyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 599

 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/603 (54%), Positives = 414/603 (68%), Gaps = 10/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTHSC  L  SD G   RLSGWVH  R HGG++F+D+RDH+G+TQ+V    S   E
Sbjct: 1   MHPYRTHSCAALRASDAGQTARLSGWVHSKRDHGGLLFIDLRDHFGMTQIVIPAGSPVLE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR E VL I G V+ R A T N N+ TG+IEL AQ+++I S A+ LP  V G   Y
Sbjct: 61  AVERVRVESVLTITGEVVLRDAATKNPNLPTGEIELRAQQVDIQSSADVLPFQVAGHEHY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R  YR++DLRRD +H+N++ R ++I S+R RM  + F+E  TPILTASSPEGARDF
Sbjct: 121 PEDLRLTYRYIDLRRDKVHRNMMLRAQVIASLRRRMTDQGFVEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPARMHPGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEAARADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299
           M+F  Q+D+  T+E V+ GVF EF  G TVS   F RI Y  A++ YG+DKPDLRNP+++
Sbjct: 241 MAFATQEDVFATLEPVMEGVFREFGGGRTVSAAPFERIPYATAMKLYGSDKPDLRNPLLL 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F +S F +F++I  V  G EV AIPA G G   RAF D++N WAR  G  GL Y
Sbjct: 301 SDVTESFANSGFGLFARI--VADGGEVRAIPAPGAGDRPRAFYDKLNAWAREAGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  DE G   G GP+AK+L      AIR    ++ GD+ FF AG   +   F+   R 
Sbjct: 359 IIF--DEEG---GKGPIAKNLEPARVAAIREATGLKAGDAVFFAAGKGDEVVKFSGLVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA EL +I  + F FCWI DFP YE NEE  +IDF+HNPF+MPQGG+E+L G D L+I 
Sbjct: 414 RIATELDLIEQDSFRFCWITDFPMYERNEETGQIDFSHNPFSMPQGGLEALNGQDPLTIT 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH  +VM++AF   G     VE RFGG+  AF+ G PPHGG
Sbjct: 474 AYQYDIVCNGVELSSGAIRNHRPDVMIRAFELAGYPASEVEARFGGMLNAFRYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597
            A G+DRIVMLL    N+REV LFP++Q   DL+MG+P+ V  E+L+EL L + +  PK 
Sbjct: 534 SAPGVDRIVMLLADEPNIREVILFPLNQQGEDLMMGAPAPVPAERLKELSLALNLPRPKP 593

Query: 598 ILK 600
            +K
Sbjct: 594 GVK 596


>gi|304321254|ref|YP_003854897.1| aspartyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303300156|gb|ADM09755.1| aspartyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 640

 Score =  660 bits (1702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/601 (52%), Positives = 431/601 (71%), Gaps = 15/601 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M  YRTH+CG L   DVGS V LSGWVHR R HGG++F+D+RDH+G+TQ+V  P++  F 
Sbjct: 39  MTPYRTHTCGALRKGDVGSNVTLSGWVHRKRDHGGLLFIDLRDHHGLTQLVIEPEAPFFA 98

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             ++VR+E V+ ++G V++R  E +N ++ TG+IE+   + E+LS A +LPLPVFGE +Y
Sbjct: 99  EVEAVRAESVISVEGEVIARGDEVVNPSLPTGEIEIRLSRFEVLSAAGDLPLPVFGEPDY 158

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR ++R+LDLRR+T+HKNIV R+R+I+ +R  M    F E  TPILTASSPEGARDF
Sbjct: 159 PEDIRMRHRYLDLRRETMHKNIVLRSRVISQLRKGMEQREFTEYQTPILTASSPEGARDF 218

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G F+ALPQAPQ +KQL+M SGFDRYFQIAPCFRDED R+DR  GEFYQLD+E
Sbjct: 219 LVPSRLHPGKFFALPQAPQIFKQLIMVSGFDRYFQIAPCFRDEDARADRSAGEFYQLDLE 278

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNP-- 296
           MSFVEQ D+ +    V+   F  F+    V     + +I Y +++ +YG DKPDLR P  
Sbjct: 279 MSFVEQQDVFDATAPVIHEAFALFAGDRRVDPYKEWPQIPYAESLLKYGNDKPDLRLPSS 338

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           + M  VTEHF  S F++F+ I + +P  ++ AIPA  GGG+RAFCDRMN WA+ +G PG+
Sbjct: 339 LDMQVVTEHFKGSGFKIFASI-AEDPEQQIRAIPAP-GGGSRAFCDRMNSWAQKEGLPGM 396

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            YI +  DE+    G GPVAK++    T AI+ +L +  GD+ FF+AG    F + A  A
Sbjct: 397 GYIMF--DEAD---GKGPVAKNIGPERTAAIKAQLGLGAGDAAFFVAGKVESFEAIAGRA 451

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL-- 474
           R  I +ELG ++ + F F WI+DFP YEW+EE KK++F HNPF+MP+GG+ +L+      
Sbjct: 452 RVQIGRELGHLDEDRFAFAWIVDFPMYEWDEENKKVEFGHNPFSMPKGGLSALEKATTPE 511

Query: 475 --LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
             L++KA QYDLVCNG+E+ SG IRNH+ EVM +AF+  G   +VVE++FGG+  AF+ G
Sbjct: 512 AQLALKANQYDLVCNGYELGSGAIRNHLPEVMYRAFAIAGYGADVVEDKFGGMLNAFRYG 571

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG A G+DRIVMLL G +N+REV++FP++QN  D L+G+P+  S EQL+EL +R+ 
Sbjct: 572 APPHGGAAFGVDRIVMLLAGVENIREVTMFPLTQNAEDYLLGAPAEASAEQLKELHIRLA 631

Query: 593 E 593
           +
Sbjct: 632 K 632


>gi|84499750|ref|ZP_00998038.1| aspartyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84392894|gb|EAQ05105.1| aspartyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 636

 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/636 (52%), Positives = 426/636 (66%), Gaps = 47/636 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L   +VG  VRLSGWVHR+R HGG++F+D+RDHYG+TQV+ +PDS  F 
Sbjct: 1   MHAYRSHTCAELTAVNVGQTVRLSGWVHRIRDHGGVLFIDLRDHYGVTQVLCDPDSPVFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R    +N  I TG+IE+  + +E+L  A+ELPL VFG++EY
Sbjct: 61  EVEKVRSEWCIRIDGEVKARDESLVNPKITTGEIEVFIRDMEVLGAAKELPLIVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N+  R+ ++ SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREVMQQNMTLRSDVVASMRKRMWDKGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q D+ +T+  V+ GVFEEF  G  V     + +I Y DA  +YGTDKPDLRNPI 
Sbjct: 241 MSFVTQQDVFDTIAPVIGGVFEEFGGGRKVDAPAEWPQITYADAALKYGTDKPDLRNPIE 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M  V+EHF  S F +F+K+L    G E+ AIPA   GG+R FCDRMN +A+ +G PG+ Y
Sbjct: 301 MQVVSEHFRGSGFAIFAKLLE-QEGTEIRAIPAP-KGGSRKFCDRMNAFAQKEGLPGMGY 358

Query: 359 IFWRLDE--------------------------SG----NVAGM------------GPVA 376
           IFWR  E                          SG    +V GM            GP+A
Sbjct: 359 IFWRRTELPSEAKNNPEHPLFQAREQELVAEYGSGYKRYSVEGMPSQEDGSHMEAAGPLA 418

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K++    TEAIR +L +  GD+ FF+ G P  F + A  AR  I  ELG+ +   F F W
Sbjct: 419 KNIGPERTEAIRQQLGLGVGDAAFFLGGKPKSFEAVAGRARTVIGDELGLTDTERFAFAW 478

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I+DFP YE +EE   +DF+HNPF+MPQGG+++L G D L +  +QYDL CNG+EI SG I
Sbjct: 479 IVDFPMYEADEETGAVDFSHNPFSMPQGGLDALSG-DPLEVLGYQYDLACNGYEIISGAI 537

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           RNH  E+M +AF   G  ++ V  RFGG+  AFQ G PPHGG AAG+DRIVMLL    N+
Sbjct: 538 RNHKPEIMFKAFDLAGYGEDEVRKRFGGMVNAFQYGAPPHGGCAAGVDRIVMLLADEDNL 597

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           R+V LFPM+Q   DL+MG+PS    +QL EL LR++
Sbjct: 598 RDVMLFPMNQRAEDLMMGAPSEPGSDQLMELSLRVI 633


>gi|162319786|ref|YP_422199.2| aspartyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 598

 Score =  653 bits (1684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/603 (52%), Positives = 417/603 (69%), Gaps = 10/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CG L  +D G   RLSGWVHR R HG ++F+D+RDHYGITQ V +  S  F 
Sbjct: 1   MHVYRSHTCGQLKAADAGIQARLSGWVHRKRDHGNLLFVDLRDHYGITQCVIDVSSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                R E V+ + G V+ RSAETIN  + TG+IEL   ++EI S+A+ LP+ V G++EY
Sbjct: 61  ALDKARPESVITVTGKVVKRSAETINPRLPTGEIELQVAEVEIQSIADVLPIQVAGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ +H N++ R+R+I  +R  MI + F E  TPILTASSPEGARD+
Sbjct: 121 PEDMRLRYRFLDLRREDVHANMMLRSRVIAYLRQAMIGQGFTEFQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFD+YFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQFKQLLMVAGFDKYFQIAPCFRDEAGRADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MS+V QDD+   +E VL GVF+EF  G  V+   F RI Y D++ +YG+DKPDLRNPII+
Sbjct: 241 MSYVTQDDVFAAIEPVLEGVFKEFGKGRAVTPAPFPRITYADSMLKYGSDKPDLRNPIII 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F+K+  V+ G  V AIPA G  G  R++ D++N+WAR  G  GL Y
Sbjct: 301 ADVTEPFRGSGFGLFAKL--VDKGAVVRAIPAPGAAGQPRSWFDKLNDWARENGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D        GP+AK+L     EAI+   +++DGD+ FF     L    FA   R 
Sbjct: 359 IQFAAD-----GPKGPIAKNLEPARVEAIKAAANLKDGDAVFFACDKALPAAKFAGLVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I  EL ++  + F+FCW +DFP YE NEE   ++F+HNPF+MPQGGM++L   D L+I 
Sbjct: 414 KIGNELDLLEKDVFKFCWTVDFPMYEINEETGLVEFSHNPFSMPQGGMDALLNQDPLTIN 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH  ++M +AF   G S   VE  FGG+  AF+ G PPHGG
Sbjct: 474 AYQYDIVCNGVELSSGAIRNHRPDIMYKAFEIAGYSAAHVEEHFGGMLNAFKFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597
            A G+DRIVMLL    N+RE+ LFPM+Q   DLLM +P+ +++E+LREL +++ +  PKK
Sbjct: 534 SAPGVDRIVMLLADQPNIREIILFPMNQQAQDLLMQAPAEIAMERLRELHIKVDLPKPKK 593

Query: 598 ILK 600
            +K
Sbjct: 594 EVK 596


>gi|296536445|ref|ZP_06898542.1| aspartate--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296263224|gb|EFH09752.1| aspartate--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 600

 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/593 (53%), Positives = 412/593 (69%), Gaps = 9/593 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  SD G   RLSGWVHR R HGG++F+D+RDHYG+TQ V    S  F 
Sbjct: 1   MHAYRTHTCGALRASDAGQTARLSGWVHRKRDHGGLLFIDLRDHYGLTQCVIPAGSEVFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A ++R E V+ + G V++R A T+N  + TG IEL  + +E+ S AE LP+ V G++E+
Sbjct: 61  SADALRPESVITVTGEVVAREAGTVNDKLPTGAIELRVKALEVQSHAEVLPIQVAGDQEF 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+  H+N++ R  +I S+R RMI + F+E  TPILTASSPEGARDF
Sbjct: 121 PEDLRLRYRFLDLRREKQHRNMLLRAGVIASIRRRMIEQGFVEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR + G+FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPSRNHPGTFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEASRADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+   +E V+ G+F EF  G  V+   F RI YD A+  YG+DKPDLRNP+ +
Sbjct: 241 MSFVTQEDVFAAIEPVMEGIFVEFGGGRKVTPAPFPRIPYDTAMLDYGSDKPDLRNPLKI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +FSK+  V  G  V AIPA G     R F D++NEWAR++G  GL Y
Sbjct: 301 TDVTESFRESGFGLFSKV--VAGGGIVRAIPAPGAADRPRGFFDKLNEWARAEGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  +        GP+AK+L     EAIR   ++Q GD+ FF AG   +   FA   R 
Sbjct: 359 IQFAAE-----GAKGPIAKNLEAERVEAIRAACNLQPGDAVFFAAGKKDETPKFAGKVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +ELG+I  + F FCWI+DFP YE NEE  ++DF+HNPF+MPQGG+E+L   + L IK
Sbjct: 414 KLGEELGLIAQDEFRFCWIVDFPMYELNEETGQVDFSHNPFSMPQGGLEALNSMNPLDIK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           AFQYD+VCNG E++SG IRNH  ++M++AF   G + + VE RFGG+  AF+ G PPHGG
Sbjct: 474 AFQYDIVCNGIELSSGAIRNHRPDIMIRAFEIAGYTAQTVEERFGGMLNAFRYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            A GIDR+VMLL    N+REV LFP++Q   DL+MG+P+ V   +L+EL +++
Sbjct: 534 SAPGIDRMVMLLADEPNIREVILFPLNQQGQDLMMGAPAAVEPARLKELSIKL 586


>gi|97196714|sp|Q2W3D5|SYD_MAGMM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|82946776|dbj|BAE51640.1| Aspartyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 876

 Score =  652 bits (1681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/603 (52%), Positives = 417/603 (69%), Gaps = 10/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CG L  +D G   RLSGWVHR R HG ++F+D+RDHYGITQ V +  S  F 
Sbjct: 279 MHVYRSHTCGQLKAADAGIQARLSGWVHRKRDHGNLLFVDLRDHYGITQCVIDVSSPVFA 338

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                R E V+ + G V+ RSAETIN  + TG+IEL   ++EI S+A+ LP+ V G++EY
Sbjct: 339 ALDKARPESVITVTGKVVKRSAETINPRLPTGEIELQVAEVEIQSIADVLPIQVAGDQEY 398

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ +H N++ R+R+I  +R  MI + F E  TPILTASSPEGARD+
Sbjct: 399 PEDMRLRYRFLDLRREDVHANMMLRSRVIAYLRQAMIGQGFTEFQTPILTASSPEGARDY 458

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFD+YFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 459 LVPSRIHPGKFYALPQAPQQFKQLLMVAGFDKYFQIAPCFRDEAGRADRSPGEFYQLDFE 518

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MS+V QDD+   +E VL GVF+EF  G  V+   F RI Y D++ +YG+DKPDLRNPII+
Sbjct: 519 MSYVTQDDVFAAIEPVLEGVFKEFGKGRAVTPAPFPRITYADSMLKYGSDKPDLRNPIII 578

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F+K+  V+ G  V AIPA G  G  R++ D++N+WAR  G  GL Y
Sbjct: 579 ADVTEPFRGSGFGLFAKL--VDKGAVVRAIPAPGAAGQPRSWFDKLNDWARENGAGGLGY 636

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D        GP+AK+L     EAI+   +++DGD+ FF     L    FA   R 
Sbjct: 637 IQFAAD-----GPKGPIAKNLEPARVEAIKAAANLKDGDAVFFACDKALPAAKFAGLVRT 691

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I  EL ++  + F+FCW +DFP YE NEE   ++F+HNPF+MPQGGM++L   D L+I 
Sbjct: 692 KIGNELDLLEKDVFKFCWTVDFPMYEINEETGLVEFSHNPFSMPQGGMDALLNQDPLTIN 751

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH  ++M +AF   G S   VE  FGG+  AF+ G PPHGG
Sbjct: 752 AYQYDIVCNGVELSSGAIRNHRPDIMYKAFEIAGYSAAHVEEHFGGMLNAFKFGAPPHGG 811

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597
            A G+DRIVMLL    N+RE+ LFPM+Q   DLLM +P+ +++E+LREL +++ +  PKK
Sbjct: 812 SAPGVDRIVMLLADQPNIREIILFPMNQQAQDLLMQAPAEIAMERLRELHIKVDLPKPKK 871

Query: 598 ILK 600
            +K
Sbjct: 872 EVK 874


>gi|157803333|ref|YP_001491882.1| aspartyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166225384|sp|A8EXL4|SYD_RICCK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157784596|gb|ABV73097.1| aspartyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 602

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/603 (52%), Positives = 426/603 (70%), Gaps = 12/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59
           MH+YRTH+C  L +SDVG  V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 1   MHKYRTHNCNALQISDVGKEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNLQLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+A  +R E V+ + G V++RS +TIN  + TG IE+ A++  + S A+ LP  +  E++
Sbjct: 61  EMASRLRYESVITVIGKVVARSGDTINDTLTTGHIEILAREFIVESAADTLPFVINTEKD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE +R K+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 121 APEDLRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTARGFTEFQTPILTASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRMHSGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++       F+RI Y++++ +YG+DKPDLRNPII+
Sbjct: 241 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFIRIPYNESMLKYGSDKPDLRNPIII 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S+F +F +  ++  G  V AIPA K     R+F D+M E+A S+G  GL Y
Sbjct: 301 ADVTEIFRDSDFTIFRE--NIKKGSVVRAIPAPKAAAHARSFFDKMIEFAISEGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +    S N    GPVAK L+    E+++  +++ DGD+ FF++    K    A   R 
Sbjct: 359 IQF----SKNDKAKGPVAKFLSPQQLESLKATVNISDGDAVFFVSDKKEKAAKLAGKVRI 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----NDL 474
            I+ EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++LK      +L
Sbjct: 415 RISDELDLLEKDCFKFCWITDFPFYELNEETAKIDFSHNPFSMPQGGLDALKNAKTTAEL 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V  RFG + RAF+ G P
Sbjct: 475 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVNKRFGSMIRAFKFGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +P+ V  + L+ELG+ ++ +
Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPNYVEDKALKELGIMLLPS 594

Query: 595 PKK 597
            +K
Sbjct: 595 ARK 597


>gi|330993298|ref|ZP_08317234.1| Aspartyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759700|gb|EGG76208.1| Aspartyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 598

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/599 (53%), Positives = 408/599 (68%), Gaps = 10/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTHSC  L  +D G   RLSGWVH  R HGG++F+D+RDH+G+TQ+V    S   E
Sbjct: 1   MHPYRTHSCAALRAADAGQTARLSGWVHSKRDHGGLLFIDLRDHFGMTQIVIPAGSPVLE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ VR E VL + G V+ R   T N N+ TG+IEL A++I + S A+ LPL V G   Y
Sbjct: 61  TAERVRVESVLTVTGEVVLRDGATKNPNLPTGEIELRAREITVQSSADVLPLQVAGNEHY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R  YR++DLRR+ +H+NI+ R ++I S+R RM    F+E  TPILTASSPEGARDF
Sbjct: 121 PEDLRLTYRYIDLRREKVHRNIMLRAQVIASLRRRMTDLGFVEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPARMHPGRFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEAARADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299
           M+F  Q+D+  T+E V+ GVF EF  G  VS   F RI Y  A+  YG+DKPDLRNP+ +
Sbjct: 241 MAFATQEDVFATLEPVMEGVFREFGGGRIVSEGPFERIPYATAMAVYGSDKPDLRNPLRL 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F++I +   G ++ AIPA G G   RAF D++N WAR  G  GL Y
Sbjct: 301 SDVTEAFADSGFGLFARIAA--DGGQIRAIPAPGAGDRPRAFFDKLNNWARESGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D      G GP+AK+L     EAIR +  ++ GD+ FF+AG   +   F+   R 
Sbjct: 359 IIFAED-----GGKGPIAKNLEADRIEAIRAKTGLKAGDAVFFVAGKGDEMVRFSGAVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A EL +I  N F FCWI DFP YE NEE  +IDF+HNPF+MPQGGM++L   D L+IK
Sbjct: 414 RVATELDLIEQNAFRFCWITDFPMYERNEETGQIDFSHNPFSMPQGGMDALLNQDPLTIK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           AFQYD+VCNG E++SG IRNH  +VM++AF   G     VE RFGG+  AF+ G PPHGG
Sbjct: 474 AFQYDIVCNGIELSSGAIRNHQPDVMIRAFEIAGYPASEVEARFGGMLNAFRYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPK 596
            A G+DRIVMLL    N+REV LFP++Q   DL+MG+P+ V  ++L+EL L + +  PK
Sbjct: 534 SAPGVDRIVMLLADEPNIREVILFPLNQQGEDLMMGAPAPVEPQRLKELSLALDLPRPK 592


>gi|254294268|ref|YP_003060291.1| aspartyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254042799|gb|ACT59594.1| aspartyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 605

 Score =  650 bits (1676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/601 (53%), Positives = 417/601 (69%), Gaps = 10/601 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L    VG  VR+SGWVHR R HGG++F+D+RDHYG+TQ V  PD+A F 
Sbjct: 1   MHAYRTHTCGQLRSEHVGETVRISGWVHRKRDHGGLLFIDLRDHYGLTQCVVQPDNAHFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R E V+ I G V++RS ET N ++ TG IE+    +E+ S A+ELPLPVFGE +Y
Sbjct: 61  TLERIRVESVVSITGNVVARSEETANESLDTGAIEVVISDLEVQSAADELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR K+R+LDLRR+TLHKNI+ R+ +I S+R RM A+NF E  TPILTASSPEGARDF
Sbjct: 121 PEEIRLKHRYLDLRRETLHKNIMLRSNVITSLRERMKAQNFTEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++   FYALPQAPQQ+KQL+M SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRMHPNKFYALPQAPQQFKQLMMVSGFDRYFQIAPCFRDEDLRADR-SLEFYQLDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+  ++E V+ GVFEEFS   TV+   F RI Y +A+ +YG+DKPDLRNPI +
Sbjct: 240 MSFVTQEDVFASIEPVMHGVFEEFSGDKTVTPAPFPRIPYLEAMAKYGSDKPDLRNPIEL 299

Query: 300 HNVTEHFV---HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ-PG 355
            +VTE FV    + F +F+KI++          P      +R F D M++WA+ + Q PG
Sbjct: 300 GDVTEFFVDDSKTGFGIFAKIIAGGGKVIAIPAPKAAAEKSRKFFDEMDKWAKKEMQAPG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y   +  + G +    PV K+    +  A+  +L ++ GD  FF AG        A  
Sbjct: 360 LGYARLKEADGGGIDSQDPVLKNFEPAHLAAMLEQLGLEAGDGIFFSAGKKTDAYKLAGA 419

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL- 474
           AR  + +EL I+  + F+FCWI+DFP YEW+E+ KK+DF+HNPF+MPQGG+E L+  D  
Sbjct: 420 ARLKVGEELDIVEKDIFKFCWIVDFPMYEWDEDNKKVDFSHNPFSMPQGGLEVLEAADTD 479

Query: 475 ---LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
              L I A+QYD+VCNG E++SG IRNH  ++M++AF   G   EVVE  FGG+  AF+ 
Sbjct: 480 EKKLEILAYQYDIVCNGTELSSGAIRNHRPDIMIKAFELAGYGPEVVEEEFGGMLNAFRY 539

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA GIDR+VMLL  A N+R+V +FPM+Q   DLL+G+PS     QLREL LR+
Sbjct: 540 GAPPHGGIAPGIDRMVMLLAEADNIRDVIMFPMNQQGQDLLLGAPSVAENSQLRELSLRL 599

Query: 592 V 592
           V
Sbjct: 600 V 600


>gi|296114975|ref|ZP_06833620.1| aspartyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978493|gb|EFG85226.1| aspartyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 641

 Score =  650 bits (1676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/602 (52%), Positives = 411/602 (68%), Gaps = 10/602 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTHSC  L  SD G   RLSGWVH  R HGG++F+D+RDH+G+TQ+V    S   E
Sbjct: 37  MHPYRTHSCAALRASDAGQTARLSGWVHSKRDHGGLLFIDLRDHFGLTQIVIPAGSPVLE 96

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +R E VL I G V+ R A T N N+ TG IE+ AQ+I++ S A+ LP  V G+  Y
Sbjct: 97  LAEKIRVESVLTITGEVVLRDAATKNPNLPTGDIEVRAQQIDVQSAADVLPFQVAGQENY 156

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R  YR++DLRR+ +H+NI+ R ++I S+R RM    F+E  TPILTASSPEGARDF
Sbjct: 157 PEDLRLTYRYIDLRREKVHRNIMLRAQVIASLRRRMTDLGFVEFQTPILTASSPEGARDF 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 217 LVPARMHPGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEAARADRSPGEFYQLDFE 276

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299
           M+F  Q+D+  T+E V+ GVF EF  G  VS   F RI Y  A+  YG+DKPDLRNP+ +
Sbjct: 277 MAFATQEDVFATLEPVMEGVFREFGGGRIVSKAPFERIPYATAMEVYGSDKPDLRNPLKI 336

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VT+ F  S F +F++I  V  G +V AIPA G G   RAF D++N WAR  G  GL Y
Sbjct: 337 SDVTDSFAESGFGLFARI--VADGGQVRAIPAPGAGEKPRAFFDKLNAWAREVGAGGLGY 394

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D      G GP+AK+L      AIR +  ++ GD+ FF AG   +   F+   R 
Sbjct: 395 IIFAED-----GGKGPIAKNLEPERIAAIRDKTGLKAGDAVFFAAGKGDEVARFSGLVRT 449

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA EL +I  N F FCWI DFP +E NE+  +IDF+HNPF+MPQGGME+L+  D L+IK
Sbjct: 450 RIATELDLIEENAFRFCWITDFPMFERNEDTGQIDFSHNPFSMPQGGMEALEKQDPLTIK 509

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH  +VM++AF   G  +  VE RFGG+  AF+ G PPHGG
Sbjct: 510 AYQYDIVCNGIELSSGAIRNHRPDVMIRAFEIAGYPESEVEARFGGMLNAFRYGAPPHGG 569

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597
            A G+DRIVMLL    N+REV LFP++Q   DL+MG+P+ V   +L+EL L + +  PK 
Sbjct: 570 SAPGVDRIVMLLADEPNIREVILFPLNQQGEDLMMGAPAPVESARLKELSLALDLPKPKP 629

Query: 598 IL 599
           ++
Sbjct: 630 VV 631


>gi|114326876|ref|YP_744033.1| aspartyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114315050|gb|ABI61110.1| aspartyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 603

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/597 (52%), Positives = 411/597 (68%), Gaps = 9/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H CG L  +D G+  RLSGW+H  R HGG++F+D+RDHYG+TQ V    +  F 
Sbjct: 9   MHAYRSHDCGALRAADTGTEARLSGWIHSKRDHGGLLFIDLRDHYGLTQCVFASGTDIFA 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R E V+ + G V++R   T+N  + TG+IEL    +++ S AE LPL V G   Y
Sbjct: 69  TVEKLRPESVITVTGQVVARETGTVNPKLPTGEIELRVTALDVQSSAEVLPLQVAGTESY 128

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           P+ +R KYR++DLRR+ +H+N++ R ++I S+R RMI + F E  TPILTASSPEGARDF
Sbjct: 129 PDELRLKYRYIDLRRERVHRNMMLRAQVIASLRRRMIEQGFTEFQTPILTASSPEGARDF 188

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 189 LVPARLHPGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEASRADRSPGEFYQLDFE 248

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSF  Q+D+   +E V+  VFEEFSNG  V+   F RI Y+ A+  YG+DKPDLRNP+ +
Sbjct: 249 MSFATQEDVFAALEPVMAQVFEEFSNGREVTKPPFPRIPYETAMLEYGSDKPDLRNPLRI 308

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VT  F  S F +F+KI +   G  V AIPA G  GN R+F D++N+WAR++G  GL Y
Sbjct: 309 TDVTAQFDGSGFGLFAKIAAS--GGIVRAIPAPGAAGNPRSFFDKLNDWARAEGAGGLGY 366

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D  G     GP+A++L     EAIR    +Q GD+ FF AG  L+   FA   R 
Sbjct: 367 IIF--DAEGP---KGPIARNLEPERAEAIRQACGLQAGDAVFFAAGQKLEAAKFAGAVRT 421

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + QEL +I  N F FCWI+DFP YE NEE  +IDF+HNPF+MPQGG+++L   D L+IK
Sbjct: 422 RLGQELNLIAQNEFRFCWIIDFPMYELNEETGQIDFSHNPFSMPQGGLDALDNQDPLTIK 481

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH  ++M++AF   G     VE RFGG+  AF+ G PPHGG
Sbjct: 482 AYQYDIVCNGIELSSGAIRNHRPDLMIRAFEIAGYPASEVEARFGGMLNAFRYGAPPHGG 541

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            A GIDR+VMLL    N+REV LFP++Q   DL+MG+P+ V   +L+EL LRI + P
Sbjct: 542 AAPGIDRMVMLLADEPNIREVILFPLNQQGEDLMMGAPAEVEPARLKELSLRIEKPP 598


>gi|163793772|ref|ZP_02187746.1| aspartyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159180883|gb|EDP65400.1| aspartyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 590

 Score =  645 bits (1665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/596 (53%), Positives = 412/596 (69%), Gaps = 9/596 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  + VG  VR+SGW+HR R HG ++F+D+RDHYGITQ V + +   F+
Sbjct: 1   MHRYRSHTCSALRDTHVGETVRISGWIHRRRDHGQLVFIDLRDHYGITQCVTDVEDPAFQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR E V+C+ G V+ RS ET+N+ + TGQIE+     E+LS A+++PL V  E + 
Sbjct: 61  EVEKVRLESVVCVTGRVVKRSDETVNSKLPTGQIEVRIDSFEVLSAADQVPLQVNSEEDA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR +YR+LDLRR+ +HKNI+ R+ II S+R RM+ + F E  TPILTASSPEGARDF
Sbjct: 121 GEDIRLRYRYLDLRREKVHKNIMLRSAIIASIRRRMVEQGFTEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E VL GVF EFS    V   F RI Y +++ +YG+DKPDLR PI + 
Sbjct: 241 MSFVEQEDVFAAVEPVLAGVFNEFSQWQ-VPGPFPRIPYRESMLKYGSDKPDLRIPIEIA 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E F  S+F +F+KI+       V A+P     G+RA CDRMN WA+ QG PGL Y+ 
Sbjct: 300 DVSELFRESDFAIFAKIVGGG--GVVRAVPGP-KCGSRAICDRMNSWAQDQGAPGLGYMI 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E+      GP+A  L       I+    M DGD+ FF AG        A  AR  +
Sbjct: 357 FAEGEA-----RGPIASRLPAEKIAEIKAATGMGDGDAVFFSAGKEGDAAKLAGQARVKL 411

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +LG+I  + +  CWI+DFP YE +E+  KI+F+HNPF+MPQGGME+L+  D L I A+
Sbjct: 412 GNDLGLIEKDVYRLCWIVDFPMYELDEKTGKIEFSHNPFSMPQGGMEALESQDPLDILAY 471

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  E+M +AF   G   EVV+++F G+  AF+ G PPHGGIA
Sbjct: 472 QYDVVCNGIELSSGAIRNHRPEIMYKAFEIAGYGPEVVDDKFAGMINAFKFGAPPHGGIA 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIDRIVMLL   +N+REV LFPM+Q   DL+M +P+ V  EQLREL +++   PK
Sbjct: 532 PGIDRIVMLLADVQNLREVILFPMNQRAEDLMMNAPNEVRPEQLRELSIKLALPPK 587


>gi|144899163|emb|CAM76027.1| Aspartyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 595

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/600 (52%), Positives = 415/600 (69%), Gaps = 10/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH+YRTH+CG L  SD G+  RLSGWVHR R HG ++F+D+RDHYG+TQ V +  SA F 
Sbjct: 1   MHQYRTHTCGQLRASDAGTIARLSGWVHRKRDHGNLLFVDLRDHYGLTQCVLDISSAVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             +  R E V+ + G V+SR+++TIN  + TG+IEL   +IEI S+A+ LP+ V G++EY
Sbjct: 61  TLEKARPESVITVTGKVVSRTSDTINPRLPTGEIELQVAEIEIQSIADVLPIQVAGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+ +H N++ R+ +I  +R  M+ + F E  TPILTASSPEGARD+
Sbjct: 121 PEDMRLKYRFLDLRREDVHANMMLRSEVIAYLRKAMLDQGFTEFQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQAPQQ+KQLLM +GFD+YFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPARLHPGKFYALPQAPQQFKQLLMVAGFDKYFQIAPCFRDEAGRADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MS+V QDD+   +E VL GVF++F  G  V+   F RI Y +++ +YG+DKPDLRNPI +
Sbjct: 241 MSYVTQDDVFAAIEPVLEGVFKQFGKGRKVTPAPFPRIPYAESMLKYGSDKPDLRNPIEI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F+K+  V+ G  V AIPA G     R++ D++NEWAR  G  GL Y
Sbjct: 301 ADVTEPFRGSGFGLFAKL--VDKGAVVRAIPAPGAANQPRSWFDKLNEWARENGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D        GP+AK+L      AI+    + DGD+ FF     L    FA   R 
Sbjct: 359 IQFAAD-----GAKGPIAKNLEPERINAIKEAAKLNDGDAVFFACDKELPAAKFAGLVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I  +L ++  + F+FCW +DFP YE NEE   IDF+HNPF+MPQGGM++L+  D L+I 
Sbjct: 414 KIGNDLDLLEKDVFKFCWTVDFPMYELNEETGLIDFSHNPFSMPQGGMDALENQDPLTIN 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH +++M++AF   G   EVVE +FGG+  AF+ G PPHGG
Sbjct: 474 AYQYDIVCNGVELSSGAIRNHRADIMIKAFGIAGYGPEVVEEKFGGMLNAFRYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597
            A G+DRIVMLL    N+REV LFPM+Q   DLLMG+P+ V   + +EL ++  +  PKK
Sbjct: 534 SAPGVDRIVMLLADQPNIREVILFPMNQQAQDLLMGAPAEVDAMRWKELHIKPDLPKPKK 593


>gi|126725152|ref|ZP_01740995.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126706316|gb|EBA05406.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 644

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/640 (50%), Positives = 418/640 (65%), Gaps = 65/640 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           S+VG  +RLSGWVHRVR HGGI+F+D+RDHYG+TQ++A+PDS  F+  + VRSEW + ID
Sbjct: 4   SNVGETIRLSGWVHRVRDHGGILFIDLRDHYGMTQILADPDSPVFKDVEKVRSEWCIRID 63

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V +R    IN  I TG++E+  + IE+L  A ELPL VFG++EYPE  R KYRFLDLR
Sbjct: 64  GEVKARDESLINTKIPTGEVEVFIRDIEVLGAAAELPLMVFGDQEYPEETRLKYRFLDLR 123

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           R+ L  N++ R+ ++ SMR RM  + F E  TPI+TASSPEGARDFLVPSR++ G FYAL
Sbjct: 124 REKLQNNMLLRSNVVASMRKRMWDQGFNEFQTPIITASSPEGARDFLVPSRLHPGKFYAL 183

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           PQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+EMSFV Q D+ +T++
Sbjct: 184 PQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVTQQDVFDTIQ 243

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
            V+ GVFEEF  G  V   + +I Y D+   YGTDKPDLRNPI M  V+EHF  S F +F
Sbjct: 244 PVIGGVFEEFGKGRKVDQTWEQISYADSELWYGTDKPDLRNPIKMQVVSEHFAGSGFAIF 303

Query: 315 SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR------------ 362
           +K+L    G ++ AIPA  GGG+R FCDRMN +A+ +G PG+ YIFWR            
Sbjct: 304 AKLLE-QEGTQIRAIPAP-GGGSRKFCDRMNAFAQKEGLPGMGYIFWRAKPDVKVDDAFM 361

Query: 363 ---LDESGNVA---GMGPVAKHLNI-------------------VNTEAIRVR------- 390
               D +  VA   GM  V+K   +                      +A+++R       
Sbjct: 362 ELIADVNAAVAKKMGMAAVSKGQAVSGIKTPFLSHLIGALVAAGAEDKAVQLREEYLEAA 421

Query: 391 ------------------LDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
                             LD+  GD+ FF+ G P  F + A  AR  I ++LG+++ N F
Sbjct: 422 GPLAKNIGPERTEAIRKQLDLGVGDAAFFLGGKPKAFEAVAGRARTEIGEQLGLVDENRF 481

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
            F WI+DFP YE +EE  K+DF+HNPF+MPQGG+E+L   D L +  +QYDL CNG+E+ 
Sbjct: 482 AFAWIVDFPMYEVDEESGKVDFSHNPFSMPQGGLEALN-QDPLKVLGYQYDLACNGYELI 540

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG IRNH  E+M +AF   G   + V+ RFGG+ +AF  G PPHGG AAGIDRIVMLL  
Sbjct: 541 SGAIRNHQPEIMFKAFELAGYGNDEVKKRFGGMVKAFTYGAPPHGGCAAGIDRIVMLLAD 600

Query: 553 AKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
             N+REV +FPM+Q   D +M +PS    EQLREL LR++
Sbjct: 601 EANIREVIMFPMNQRAEDSMMEAPSEPLNEQLRELRLRVL 640


>gi|58040178|ref|YP_192142.1| aspartyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|62287513|sp|Q5FQ60|SYD_GLUOX RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|58002592|gb|AAW61486.1| Aspartyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 598

 Score =  641 bits (1654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/600 (52%), Positives = 409/600 (68%), Gaps = 11/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH C  L   + G  VRLSGWVH  R HGG++F+D+RDHYG+TQ+V    +   E
Sbjct: 1   MHPYRTHDCSALREENAGQVVRLSGWVHSKRDHGGLLFIDLRDHYGVTQIVIPAGTDLLE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R E V+ + G V+ R     N N+ TG +E+ A  +E+ S AE LP  V G   Y
Sbjct: 61  KAERLRVESVITVTGKVVVRHGSQRNPNLPTGDVEVLADALEVRSSAEVLPFQVAGNENY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYR++DLRRD +H+NI+ R+++I S+R RMI + F E  TPILTASSPEGARDF
Sbjct: 121 PEDLRLKYRYIDLRRDKMHQNIMLRSKVITSLRQRMIEQGFTEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPARLHPGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEASRADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+D+   +E VL GVF EF+  G  +++  F RI Y DA+R YG+DKPDLRNP+I
Sbjct: 241 MSFVTQEDVFTVLEPVLAGVFNEFTPEGWKITDGAFPRIPYADAMRDYGSDKPDLRNPLI 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           + +VT+ F  S F +F+KI +   G ++ AIPA G G   R F D++N WAR  G  GL 
Sbjct: 301 IKDVTDAFRDSGFGLFAKIAAS--GGQIRAIPAPGAGDRPRGFFDKLNSWARENGAGGLG 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI +     G   G GP+ K+L     E+IR    ++ GD+ FF AG   +   F+   R
Sbjct: 359 YIIF-----GEEGGKGPIVKNLEADRVESIREICGLKAGDAVFFAAGKGDEVAKFSGVVR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A EL +I  N F FCW++DFP YE NEE  K+DF+HNPF+MPQGG+E+L   D L+I
Sbjct: 414 TKVATELDLIEKNAFRFCWVVDFPMYELNEETGKVDFSHNPFSMPQGGLEALNTQDPLTI 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+QYD+VCNG E++SG IRNH+ +VML+AF   G   EVVE RFGG+  AF+ G PPHG
Sbjct: 474 NAYQYDIVCNGVELSSGAIRNHLPDVMLRAFEIAGYGPEVVEERFGGMLNAFRYGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPK 596
           G A G+DRIVMLL    N+REV LFP++Q+  DL+M +P+ V   +L+EL L + +  PK
Sbjct: 534 GAAPGVDRIVMLLADEPNIREVILFPLNQSGEDLMMEAPAPVEPARLKELHLALDLPKPK 593


>gi|149186863|ref|ZP_01865173.1| aspartyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148829530|gb|EDL47971.1| aspartyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 618

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/594 (52%), Positives = 411/594 (69%), Gaps = 11/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C  L   +VG  VRLSGWVH  R HGG++F+D+RDHYGITQ+VA+ DS    
Sbjct: 1   MHAYRTHTCAQLTKDNVGETVRLSGWVHNKRDHGGVLFVDLRDHYGITQIVADSDSRALP 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + ++ E V+ IDG V +R    +N N+ TG+IE+ A++IEI S AE+LPL V    +Y
Sbjct: 61  VLEKLKLESVVTIDGTVKARDEVAVNKNLPTGEIEVFAREIEIQSRAEDLPLIVNQAEDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYRF+DLRR+ +HKNI+ R R+I S+R RM  + F E  TPIL ASSPEGARD+
Sbjct: 121 PEETRLKYRFVDLRRERVHKNIMLRNRVITSLRRRMTDQGFSEFQTPILGASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQ +KQLLM +GFDRYFQIAPCFRDED R+DR P EFYQLD E
Sbjct: 181 LVPSRLHPGRFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDLRADRSP-EFYQLDFE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+D+   +E VL GVFEEF++G TV+    F RI Y +++ +YGTDKPDLRNP+I
Sbjct: 240 MSFVTQEDVFQAIEPVLAGVFEEFADGKTVTPAGEFPRIPYAESMLKYGTDKPDLRNPLI 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLA 357
           + +VT+HF  S F +F KI  V  G  V  +PA      +R F D MN+WAR +G  GL 
Sbjct: 300 ISDVTDHFTTSGFGLFEKI--VGTGGRVRVVPAPNTHEKSRKFFDEMNDWARREGFAGLG 357

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  +  E G     GP+AK+      E +   L + + D  FF AG        A  AR
Sbjct: 358 YVTRKGGEFG-----GPIAKNHGTEGMEKLYAELGLGENDGLFFAAGKEKDAAKLAGAAR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ELG+I   CF+FCWI+DFP +E++E+ K++DF+HNPF+MPQG ME+L+  D L I
Sbjct: 413 TRVAEELGLIEEGCFKFCWIVDFPMFEYDEDAKRVDFSHNPFSMPQGEMEALETKDPLDI 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+QYD+VCNG+E++SG IRNH  ++M +AF   G S+  V+  F G+  AF+ G PPHG
Sbjct: 473 LAWQYDIVCNGYELSSGAIRNHRPDIMYKAFEIAGYSQADVDANFSGMIEAFKLGAPPHG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G A GIDRIVMLL    N+REV  FP++Q   D++MG+PS V+  QLR++ +R+
Sbjct: 533 GSAPGIDRIVMLLADEPNIREVIAFPLNQKAQDMMMGAPSVVAPSQLRDVHIRL 586


>gi|239947034|ref|ZP_04698787.1| aspartyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921310|gb|EER21334.1| aspartyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 605

 Score =  635 bits (1637), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 312/603 (51%), Positives = 422/603 (69%), Gaps = 12/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59
           MH+YRTH+C +L +SDV   V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 1   MHKYRTHNCNELQISDVEKEVKLSGWVHRRRDHGNLLFIDLRDHYGITQIVFTDQNPQLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  I S A+ LP  +  E++
Sbjct: 61  EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFIIESAADTLPFVINTEKD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 121 APEESRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTARGFTEFQTPILTASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+DI +T+E V+  +F +F++       F+RI Y++++ +YG+DKPDLRNPII+
Sbjct: 241 EMSFVTQEDIFSTIEPVMHDLFTKFTDEKVSETPFVRIPYNESMLKYGSDKPDLRNPIII 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358
            +VTE F +S+F +F +  ++  G  V AIPA K     R+F D+M E+A S+G  GL Y
Sbjct: 301 ADVTEIFRNSDFTIFRE--NIKKGSIVRAIPAPKAASLPRSFFDKMIEFAISEGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +  E+G     GPVAK L+    E+++    + +GD+ FF +    K    A   R 
Sbjct: 359 I--QFSETGE--AKGPVAKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRI 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474
            + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +L
Sbjct: 415 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G P
Sbjct: 475 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEKVDKRFGGMIRAFKFGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  +
Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPS 594

Query: 595 PKK 597
            +K
Sbjct: 595 VRK 597


>gi|209964841|ref|YP_002297756.1| aspartyl-tRNA synthetase AspS [Rhodospirillum centenum SW]
 gi|238064672|sp|B6IN46|SYD_RHOCS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|209958307|gb|ACI98943.1| aspartyl-tRNA synthetase AspS [Rhodospirillum centenum SW]
          Length = 601

 Score =  634 bits (1635), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 311/605 (51%), Positives = 418/605 (69%), Gaps = 16/605 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L   + G  VRLSGW+HR R HG ++F+D+RDHYG+TQ V +  +  F 
Sbjct: 1   MHAYRTHTCGQLREQNAGETVRLSGWIHRKRDHGNLLFIDLRDHYGLTQCVIDTSNPNFG 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R E V+ + G V++R+ ET+N  + TG+IE+  +++E+ S A+++PL V  E++ 
Sbjct: 61  TVEGLRVESVITVTGKVVARTTETVNDKLPTGRIEVQVKELEVQSAADQVPLQVNSEQDA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YRFLDLRR+ + +N+V R+ +I S+R RMI + F E  TPILTASSPEGARDF
Sbjct: 121 GEELRLRYRFLDLRREKMQRNMVLRSNVIASVRRRMIEQGFTEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R + G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 181 LVPARNHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-----FLRICYDDAIRRYGTDKPDLRN 295
           MSFV QDD+   +E V+ G+FEEFS    V  +     F+RI +D+A+ +YG+DKPDLRN
Sbjct: 241 MSFVTQDDVFAAIEPVIHGIFEEFSGFTGVKKSVSPYPFVRIPFDEAMLKYGSDKPDLRN 300

Query: 296 PIIMHNVTEHFVHS--EFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQG 352
           P+++ +VT+ F     EF+ F  +  +  G  V  I   G     R+F D++N+WAR  G
Sbjct: 301 PLVIVDVTDVFRRPDVEFKAFKGV--IEKGGVVRTIRVPGVADRPRSFYDKLNDWARGLG 358

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
            PGL YI +   E G  AG GP+AK +      A+R      DGD+ FF+   P      
Sbjct: 359 APGLGYIVF---EGG--AGKGPIAKFVPEAAQAALRQATGAVDGDAVFFVCDQPGPAAKL 413

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
           A  AR  IA +L +I  + FEFCWI+DFP YE++EE KKIDF+HNPF+MPQGG+E+L+  
Sbjct: 414 AGQARTEIATQLDLIAKDRFEFCWIVDFPMYEYDEERKKIDFSHNPFSMPQGGLEALETQ 473

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D L+IKAFQYD+VCNG E++SG IRNH  E+M +AF   G + E +E +FGG+  AF+ G
Sbjct: 474 DPLTIKAFQYDIVCNGVELSSGAIRNHRPEIMYKAFEIAGYAAEDLEAKFGGMLSAFKLG 533

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI- 591
            PPHGG A GIDR+VMLL    N+REV LFP++Q   DLLM +P+ V+ E+L+EL L++ 
Sbjct: 534 APPHGGSAPGIDRMVMLLADEPNIREVILFPLNQRAEDLLMQAPNGVAPERLKELHLKLD 593

Query: 592 VENPK 596
           +  PK
Sbjct: 594 LPKPK 598


>gi|91205164|ref|YP_537519.1| aspartyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157827498|ref|YP_001496562.1| aspartyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|123084585|sp|Q1RJN4|SYD_RICBR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225383|sp|A8GXC5|SYD_RICB8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91068708|gb|ABE04430.1| Aspartyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157802802|gb|ABV79525.1| aspartyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 602

 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 310/603 (51%), Positives = 422/603 (69%), Gaps = 12/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59
           MH+YRTH+C +L +SDVG+ V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 1   MHKYRTHNCNELKISDVGAEVKLSGWVHRRRDHGNLVFVDLRDHYGITQIVFTDQNPQLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A  +R E V+ + G V++RS ETIN  + TG IE+ A +  + S A+ LP  +  E++
Sbjct: 61  DDASRLRYESVVTVIGKVVARSEETINNTLPTGHIEVLAGEFIVESAADTLPFVINTEKD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 121 APEDSRLKHRFLDLRREKLHNNIMLRSQIISYIRQLMTARGFTEFQTPILTASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+DI +T+E V+  +F +F++       F+RI Y++++ +YG+DKPDLRNPI++
Sbjct: 241 EMSFVTQEDIFSTIEPVMYELFTKFTDKKVSEAPFIRIPYNESMLKYGSDKPDLRNPIVI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S+F +F +  ++  G  V AIPA       R+F D+M E+A S+G  GL Y
Sbjct: 301 ADVTEIFRDSDFTIFRE--NIKKGSIVRAIPAPYAAAQPRSFFDKMIEFAISEGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +  E+G     GPVAK L+    E ++   ++ +GD+ FF +    K    A   R 
Sbjct: 359 I--QFSETGE--AKGPVAKFLSTQQLEDLKATANISNGDAVFFASDKKDKAAKLAGKVRI 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----NDL 474
            +A EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+E+L+      +L
Sbjct: 415 KLADELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGLEALENAKTTEEL 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L + A+QYD+VCNG E++SG +RNH  E+M +AF+  G S+E V+ RFGG+ RAF+ G P
Sbjct: 475 LELTAYQYDIVCNGIELSSGAVRNHKPEIMYKAFAIAGYSEEEVDKRFGGMIRAFKFGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +P+ V  + L+EL + +  +
Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPNYVEDKALKELNVMLSPS 594

Query: 595 PKK 597
            +K
Sbjct: 595 ARK 597


>gi|229586385|ref|YP_002844886.1| aspartyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259511869|sp|C3PMI3|SYD_RICAE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|228021435|gb|ACP53143.1| Aspartyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 602

 Score =  633 bits (1633), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 309/603 (51%), Positives = 421/603 (69%), Gaps = 12/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59
           MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 1   MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  + S A+ LP  +  E++
Sbjct: 61  EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  RFK+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 121 APEESRFKHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++       F+ I Y++++ +YG+DKPDLRNPII+
Sbjct: 241 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S+F +F +  ++  G  V AIPA K     R+F D+M E+A S+G  GL Y
Sbjct: 301 ADVTEIFRDSDFTIFRE--NIKKGSIVRAIPAPKAAALPRSFFDKMIEFAVSEGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +  E+G     GPV K L+    E+++    + +GD+ FF +    K    A   R 
Sbjct: 359 I--QFSETGE--AKGPVVKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRI 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474
            + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +L
Sbjct: 415 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G P
Sbjct: 475 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  +
Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPS 594

Query: 595 PKK 597
            +K
Sbjct: 595 ARK 597


>gi|67459530|ref|YP_247154.1| aspartyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536063|sp|Q4UKE2|SYD_RICFE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|67005063|gb|AAY61989.1| Aspartyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 600

 Score =  633 bits (1632), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 309/597 (51%), Positives = 416/597 (69%), Gaps = 12/597 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59
           MH+YRTH+C +L +SDV   V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 1   MHKYRTHNCNELQISDVRKEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNQQLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G +++RS +TIN  + TG IE+ A +  + S A+ LP  +  E++
Sbjct: 61  EDASRLRYESVITVRGTIVARSNDTINDTLPTGHIEVLAGEFIVESAADTLPFVINTEKD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M    F E  TPILTASSPEGARD
Sbjct: 121 APEETRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTGRGFTEFQTPILTASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+DI +T+E V+  +F +F+        F+RI Y++++ +YG+DKPDLRNPII+
Sbjct: 241 EMSFVTQEDIFSTIEPVMYDLFTKFTAKKVSETPFVRIPYNESMLKYGSDKPDLRNPIII 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S+F +F +  ++  G  V AIPA K     R+F D+M E+A S+G  GL Y
Sbjct: 301 ADVTEIFRDSDFTIFRE--NIKKGSIVRAIPAPKAAALPRSFFDKMIEFAISEGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +  E+G     GPVAK L+    E+++    + +GD+ FF +    K    A   R 
Sbjct: 359 I--QFSETGEAK--GPVAKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRI 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474
            + +EL ++  +CF+FCWI DFPFYE NE+  KIDF+HNPF+MPQGG+E+L+      +L
Sbjct: 415 RLGEELDLLEKDCFKFCWITDFPFYELNEDTGKIDFSHNPFSMPQGGLEALEQAKTTEEL 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G P
Sbjct: 475 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSMAGYSEEEVDKRFGGMIRAFKFGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PHGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +
Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIML 591


>gi|258541467|ref|YP_003186900.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256632545|dbj|BAH98520.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256635602|dbj|BAI01571.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256638657|dbj|BAI04619.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256641711|dbj|BAI07666.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256644766|dbj|BAI10714.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256647821|dbj|BAI13762.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256650874|dbj|BAI16808.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256653865|dbj|BAI19792.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 595

 Score =  632 bits (1631), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 314/597 (52%), Positives = 402/597 (67%), Gaps = 9/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+HSC  L  SD G+  RLSGWVH  R HGG++F+D+RD  G+TQ+V    S   E
Sbjct: 1   MHPYRSHSCSALRASDAGTTARLSGWVHSKRDHGGLLFIDLRDETGLTQIVIPAGSPVME 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R E V+ + G V+ R   T N ++ TG IEL A+++ + S A  LPL V G+  Y
Sbjct: 61  TAEHLRVESVITVTGEVVLRDETTRNPDLATGDIELRARELIVQSSAAVLPLQVAGQEHY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R +YR++DLRR+ +H NI  R+ II SMR RM    F E  TPILTASSPEGARDF
Sbjct: 121 SDELRLRYRYIDLRREQVHANIRLRSAIIASMRRRMTDLGFTEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR + G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPSRTHAGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEASRADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299
           M+F  QD+I   +E V+ G+F EF  G  VS   F RI Y  A++ YG+DKPDLRNP+++
Sbjct: 241 MAFATQDEIFAVLEEVMSGLFTEFGKGRAVSTAPFERIPYARAMKVYGSDKPDLRNPLLI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F++I +   G EV AIPA G GG +R+F D++N WAR  G  GL Y
Sbjct: 301 TDVTEDFAGSGFGLFARIAA--DGGEVRAIPAPGAGGRSRSFYDKLNAWARENGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +   E G   G GP+AK+L     EAIR +L +  GD+ FF AG       F+   R 
Sbjct: 359 ITFA--EEG---GQGPIAKNLEADRVEAIRTKLGLNPGDAVFFAAGKGHDVAKFSGLVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+EL +I  + F FCWI DFP YE NEE   IDF+HNPF+MPQGG+E+L   + L I 
Sbjct: 414 RIAEELDLIEKDAFRFCWITDFPMYELNEETGLIDFSHNPFSMPQGGLEALNTKNPLDIL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH+ +VM++AF   G  +  VE RFGG+  AF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIELSSGAIRNHLPDVMIRAFEIAGYPESEVEARFGGMLNAFRYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            A G+DRIVMLL    N+REV LFP++Q   DL+MG+P+ V  E+L+EL L +   P
Sbjct: 534 SAPGVDRIVMLLADEPNIREVILFPLNQQGEDLMMGAPAPVPPERLKELSLALNLKP 590


>gi|157828061|ref|YP_001494303.1| aspartyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|157800542|gb|ABV75795.1| aspartyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
          Length = 612

 Score =  631 bits (1628), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 308/603 (51%), Positives = 420/603 (69%), Gaps = 12/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59
           MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 11  MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 70

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  + S A+ LP  +  E++
Sbjct: 71  EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 130

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 131 APEESRLKHRFLDLRREKLHNNIILRSQIISHLRHLMTARGFTEFQTPILTASSPEGARD 190

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 191 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 250

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++       F+ I Y++++ +YG+DKPDLRNPII+
Sbjct: 251 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 310

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S+F +F +  ++  G  V AIPA K     R+F D+M E+A S+G  GL Y
Sbjct: 311 ADVTEIFRDSDFTIFRE--NIKKGSIVRAIPAPKAAALPRSFFDKMIEFAISEGAGGLGY 368

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +  E+G     GPV K L+    E+++    + +GD+ FF +    K    A   R 
Sbjct: 369 I--QFSETGE--AKGPVVKFLSPQQLESLKATASVSNGDAVFFASDKKEKAAKLAGKVRI 424

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474
            + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +L
Sbjct: 425 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 484

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G P
Sbjct: 485 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAP 544

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  +
Sbjct: 545 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPS 604

Query: 595 PKK 597
            +K
Sbjct: 605 ARK 607


>gi|157964212|ref|YP_001499036.1| aspartyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157843988|gb|ABV84489.1| Aspartyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 607

 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 308/603 (51%), Positives = 419/603 (69%), Gaps = 12/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59
           MH+YRTH+C +L +SDV   V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 6   MHKYRTHNCNELQISDVEKEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 65

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  + S A+ LP  +  E++
Sbjct: 66  EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 125

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 126 APEESRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEGARD 185

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 186 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 245

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++       F+ I Y++++ +YG+DKPDLRNPII+
Sbjct: 246 EMSFVTQEDVFSTLEPVMYDLFTKFTDKKVSETPFICIPYNESMLKYGSDKPDLRNPIII 305

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S+F +F +  ++  G  V AIPA K     R+F D+M E+A S+G  GL Y
Sbjct: 306 ADVTEIFRDSDFTIFRE--NIKKGSIVRAIPAPKAAALPRSFFDKMIEFAISEGAGGLGY 363

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +  E+G     GPV K L+    E+++    + +GD+ FF +    K    A   R 
Sbjct: 364 I--QFSETGE--AKGPVVKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRI 419

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474
            + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +L
Sbjct: 420 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 479

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G P
Sbjct: 480 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAP 539

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  +
Sbjct: 540 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPS 599

Query: 595 PKK 597
            +K
Sbjct: 600 ARK 602


>gi|15892110|ref|NP_359824.1| aspartyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|15619236|gb|AAL02725.1| asparaginyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 615

 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 308/603 (51%), Positives = 420/603 (69%), Gaps = 12/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59
           MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 14  MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 73

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  + S A+ LP  +  E++
Sbjct: 74  EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 133

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 134 APEESRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEGARD 193

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 194 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 253

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++       F+ I Y++++ +YG+DKPDLRNPII+
Sbjct: 254 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 313

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S+F +F +  ++  G  V AIPA K     R+F D+M E+A S+G  GL Y
Sbjct: 314 ADVTEIFRDSDFTIFRE--NIKKGSIVRAIPAPKAAALPRSFFDKMIEFAISEGAGGLGY 371

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +  E+G     GPV K L+    E+++    + +GD+ FF +    K    A   R 
Sbjct: 372 I--QFSETGE--AKGPVVKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRI 427

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474
            + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +L
Sbjct: 428 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 487

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G P
Sbjct: 488 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAP 547

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  +
Sbjct: 548 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPS 607

Query: 595 PKK 597
            +K
Sbjct: 608 ARK 610


>gi|20139895|sp|Q92J82|SYD_RICCN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 602

 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 308/603 (51%), Positives = 420/603 (69%), Gaps = 12/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59
           MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 1   MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  + S A+ LP  +  E++
Sbjct: 61  EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 121 APEESRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++       F+ I Y++++ +YG+DKPDLRNPII+
Sbjct: 241 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S+F +F +  ++  G  V AIPA K     R+F D+M E+A S+G  GL Y
Sbjct: 301 ADVTEIFRDSDFTIFRE--NIKKGSIVRAIPAPKAAALPRSFFDKMIEFAISEGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +  E+G     GPV K L+    E+++    + +GD+ FF +    K    A   R 
Sbjct: 359 I--QFSETGE--AKGPVVKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRI 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474
            + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +L
Sbjct: 415 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G P
Sbjct: 475 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  +
Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPS 594

Query: 595 PKK 597
            +K
Sbjct: 595 ARK 597


>gi|165932758|ref|YP_001649547.1| aspartyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|165907845|gb|ABY72141.1| aspartyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 615

 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 308/603 (51%), Positives = 419/603 (69%), Gaps = 12/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59
           MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 14  MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 73

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  + S A+ LP  +  E++
Sbjct: 74  EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 133

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 134 APEESRLKHRFLDLRREKLHNNIILRSQIISHLRHLMTARGFTEFQTPILTASSPEGARD 193

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 194 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 253

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++       F+ I Y++++ +YG+DKPDLRNPII+
Sbjct: 254 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 313

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F +  ++  G  V AIPA K     R+F D+M E+A S+G  GL Y
Sbjct: 314 ADVTEIFRDSNFTIFRE--NIKKGSIVRAIPAPKAAALPRSFFDKMIEFAISEGAGGLGY 371

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +  E+G     GPV K L+    E+++    + +GD+ FF +    K    A   R 
Sbjct: 372 I--QFSETGE--AKGPVVKFLSPQQLESLKATASVSNGDAVFFASDKKEKAAKLAGKVRM 427

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474
            + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +L
Sbjct: 428 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 487

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G P
Sbjct: 488 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAP 547

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  +
Sbjct: 548 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPS 607

Query: 595 PKK 597
            +K
Sbjct: 608 ARK 610


>gi|157825326|ref|YP_001493046.1| aspartyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166225382|sp|A8GMB3|SYD_RICAH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157799284|gb|ABV74538.1| aspartyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 602

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 309/606 (50%), Positives = 421/606 (69%), Gaps = 12/606 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59
           MH+YRTH+C +L +SDVG  V+LSGWVHR R HG ++F+D+RDHYGI Q+V  + +    
Sbjct: 1   MHKYRTHNCSELQISDVGQEVKLSGWVHRRRDHGNLVFIDLRDHYGIIQIVFTDQNPQLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  + S A+ LP  +  E++
Sbjct: 61  EDASRLRYESVVTVRGTVVARSEDTINNTLPTGHVEVLAVEFIVESAADTLPFVINTEKD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M+A  F E  TPILTASSPEGARD
Sbjct: 121 APEDSRLKHRFLDLRREKLHNNIILRSQIISHIRHLMMARGFTEFQTPILTASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDL 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++    +  F+RI Y++++ +YG+DKPDLRN II+
Sbjct: 241 EMSFVTQEDVFSTIEPVMYDLFNKFTDKKVSATPFVRIPYNESMLKYGSDKPDLRNTIII 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S+F +F +  ++  G  V AIPA K     R+F D+M E+A S+G  GL Y
Sbjct: 301 SDVTEIFRDSDFTIFRE--NIRKGSIVRAIPAPKAATMPRSFFDKMIEFAISEGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +  E+G   G   VAK L+    ++++    + +GD+ FF++    K    A   R 
Sbjct: 359 I--QFSETGETKGA--VAKFLSTQQLDSLKATASISNGDAVFFVSDKKEKAARLAGKVRI 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----NDL 474
            + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+E+L+       L
Sbjct: 415 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGLEALENAKTTEAL 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L + A+QYD+VCNG E++SG IRNH  ++M +AFS  G S+E V  RFGG+ RAF+ G P
Sbjct: 475 LELNAYQYDIVCNGIELSSGAIRNHKPDIMYKAFSIAGYSEEEVNKRFGGMIRAFKFGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA GIDRIVMLL  A N+REV  FP++Q   DLLM +PS V  + L+EL + +  +
Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREVIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPS 594

Query: 595 PKKILK 600
            +K  K
Sbjct: 595 ARKNAK 600


>gi|34580859|ref|ZP_00142339.1| asparaginyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262244|gb|EAA25748.1| asparaginyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 612

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 308/603 (51%), Positives = 418/603 (69%), Gaps = 12/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59
           MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 11  MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 70

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  + S A+ LP  +  E++
Sbjct: 71  EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 130

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI  R++II  +R  M A  F E  TPILTASSPEGARD
Sbjct: 131 APEESRLKHRFLDLRREKLHNNITLRSQIIAHIRHLMTASGFTEFQTPILTASSPEGARD 190

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 191 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 250

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++       F+ I Y++++ +YG+DKPDLRNPII+
Sbjct: 251 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 310

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S+F +F +  ++  G  V AIPA K     R+F D+M E+A S+G  GL Y
Sbjct: 311 ADVTEIFRDSDFTIFRE--NIKKGSIVRAIPAPKAAALPRSFFDKMIEFAVSEGAGGLGY 368

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +  E+G     GPV K L+    E+++    + +GD+ FF +    K    A   R 
Sbjct: 369 I--QFSETGE--AKGPVVKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRI 424

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474
            + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +L
Sbjct: 425 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 484

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G P
Sbjct: 485 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAP 544

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  +
Sbjct: 545 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPS 604

Query: 595 PKK 597
            +K
Sbjct: 605 ARK 607


>gi|329115060|ref|ZP_08243815.1| Aspartyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326695503|gb|EGE47189.1| Aspartyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 595

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 310/597 (51%), Positives = 399/597 (66%), Gaps = 9/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+HSC  L  SD G+  RLSGWVH  R HGG++F+D+RD  G+TQ+V    S   E
Sbjct: 1   MHPYRSHSCSALRASDAGTTARLSGWVHSKRDHGGLLFIDLRDETGLTQIVIPAGSPVME 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R E V+ + G V+ R   T N ++ TG IE+ A+++ + S A  LPL V G+  Y
Sbjct: 61  TAEHLRVESVITVTGDVVLRDETTRNPDLATGDIEVRARELIVQSSAAVLPLQVAGQEHY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R +YR++DLRR+ +H NI  R+ II SMR RM    F E  TPILTASSPEGARDF
Sbjct: 121 SDELRLRYRYIDLRREQVHANIRLRSAIIASMRRRMTDLGFTEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR + G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPSRTHAGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEASRADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299
           M+F  QD+I   +E V+ G+F EF  G  VS   F RI Y  A++ YG+DKPDLRNP+++
Sbjct: 241 MAFATQDEIFAVLEEVMSGLFTEFGKGRAVSTAPFERIPYARAMKVYGSDKPDLRNPLLI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F++I +   G EV AIPA G GG  R+F D++N WAR  G  GL Y
Sbjct: 301 TDVTEDFAGSGFGLFARIAA--DGGEVRAIPAPGAGGRPRSFYDKLNAWARENGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +         G GP+AK+L     E IR +L ++ GD+ FF AG       F+   R 
Sbjct: 359 ITF-----AEEGGQGPIAKNLEADRVETIRTKLGLKPGDAVFFAAGKGHDVAKFSGLVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+EL +I  + F FCWI DFP YE NEE   IDF+HNPF+MPQGG+E+L   + L I 
Sbjct: 414 RIAEELDLIEKDAFRFCWITDFPMYELNEETGLIDFSHNPFSMPQGGLEALNTKNPLDIL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH+ +VM++AF   G  +  VE RFGG+  AF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIELSSGAIRNHLPDVMIRAFEIAGYPESEVEARFGGMLNAFRYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            A G+DRIVMLL    N+REV LFP++Q   DL+MG+P+ V  E+L+EL L +   P
Sbjct: 534 SAPGVDRIVMLLADEPNIREVILFPLNQQGEDLMMGAPAPVPPERLKELSLALNLKP 590


>gi|238650679|ref|YP_002916532.1| aspartyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|238624777|gb|ACR47483.1| aspartyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 615

 Score =  629 bits (1621), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 309/606 (50%), Positives = 421/606 (69%), Gaps = 15/606 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59
           MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 11  MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 70

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  + S A+ LP  +  E++
Sbjct: 71  EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 130

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 131 APEESRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEGARD 190

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 191 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 250

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++       F+ I Y++++ +YG+DKPDLRNPII+
Sbjct: 251 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 310

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S+F +F +  ++  G  V AIPA K      +F D+M E+A S+G  GL Y
Sbjct: 311 ADVTEIFRDSDFTIFRE--NIKKGSIVRAIPAPKAAALPHSFFDKMIEFAISEGAGGLGY 368

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +  E+G     GPV K L+    E+++    + +GD+ FF +    K    A   R 
Sbjct: 369 I--QFSETGE--AKGPVVKFLSPQQLESLKATASVSNGDAVFFASDKKEKAAKLAGKVRI 424

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474
            + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +L
Sbjct: 425 RLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 484

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G P
Sbjct: 485 LELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAP 544

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL---RI 591
           PHGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL +   R+
Sbjct: 545 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIISHRL 604

Query: 592 VENPKK 597
           +E  +K
Sbjct: 605 LEKMQK 610


>gi|189184699|ref|YP_001938484.1| aspartyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|238692025|sp|B3CV53|SYD_ORITI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189181470|dbj|BAG41250.1| asparaginyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 597

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 315/603 (52%), Positives = 417/603 (69%), Gaps = 15/603 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           MH+YRTH+CG+L ++ VG  V+LSGW++R R HGG++F+D+RDHYGI Q+V N D +   
Sbjct: 1   MHKYRTHTCGELNLAHVGLQVKLSGWLYRRRDHGGLLFIDLRDHYGIIQLVFNDDCSIIQ 60

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EI+K ++ E V+ ++G V++RS ETIN NI TG +E+      + S AEELPL + GE 
Sbjct: 61  AEISK-IKFETVITVEGTVIARSNETINKNISTGDVEVVVSSYVVESFAEELPLQINGEY 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E PE  R KYRFLDLR   LH+NIV R+++I  +R +M++  FIE  TPILTASSPEGAR
Sbjct: 120 EAPEETRLKYRFLDLRGARLHQNIVLRSKVIQELRNQMLSNGFIEFQTPILTASSPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDED R+DR PGEFYQLD
Sbjct: 180 DFLVPSRLHPGKFYALPQAPQQFKQLIMMSGFDKYFQIAPCFRDEDARADRSPGEFYQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EM+FV Q+D+   +E VL   F++FSN +     F RI YD+++ RYG+DKPDLRNPI 
Sbjct: 240 IEMAFVTQEDVFGLVEPVLYNTFKKFSNYSITDIPFPRITYDESMLRYGSDKPDLRNPIQ 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           + +VT+ F  SEF       S+N G  V AIPA       R+F D+M E+A+  G  GLA
Sbjct: 300 ISDVTDIFQCSEFTTLKD--SINCGAVVRAIPAPMSANRPRSFFDKMIEYAKHLGASGLA 357

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI     +  N    G +AK  +      I+  +  QDGD+ FFI          AA  R
Sbjct: 358 YI-----QFTNDGVKGSIAKFFDEALLARIKKLVKCQDGDAIFFICDKEDDATKVAAKIR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----ND 473
             + +EL II  +C++FCW++DFPFY+ + E  KI F+HNPF+MPQGG+E+        D
Sbjct: 413 AKVGEELNIIKTDCYKFCWVIDFPFYQLDSEVNKITFSHNPFSMPQGGIEAFNKAKTVED 472

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           LLSIKAFQYD+VCNG E++SG IRNH  ++M +AF+  G SK+ V+ +FG + RAF  G 
Sbjct: 473 LLSIKAFQYDIVCNGVELSSGAIRNHKPDLMYKAFAIAGYSKDEVDKQFGAMIRAFSYGA 532

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA GIDRI+MLL  + N+REV  FPM+Q   DLLMG+PS V+ +QL+EL L+++ 
Sbjct: 533 PPHGGIAPGIDRILMLLTNSVNIREVIAFPMNQQAEDLLMGAPSAVTEKQLQELQLKLIS 592

Query: 594 NPK 596
             +
Sbjct: 593 KER 595


>gi|54288373|gb|AAV31661.1| predicted aspartyl-tRNA synthetase [uncultured alpha
           proteobacterium EBAC2C11]
          Length = 602

 Score =  625 bits (1613), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 311/597 (52%), Positives = 403/597 (67%), Gaps = 9/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  ++VG  VRLSGWV+R R HG ++F+D+RDHYG+TQ V +   A FE
Sbjct: 12  MHAYRSHNCVELTEANVGQQVRLSGWVNRKRDHGQLVFVDLRDHYGLTQCVVDSSDASFE 71

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + ++ R E V+ I G V+ RS +TIN  + TG IE+  +  E+ S A+ LPL V  + + 
Sbjct: 72  MVEATRLESVVTITGTVLKRSEDTINKALPTGHIEVRIETFEVQSNADTLPLQVNSDEDS 131

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR+LDLRR+  H NI+ R  II S+R RM+A++F E  TPILTASSPEGARDF
Sbjct: 132 GEDTRLRYRYLDLRRNRPHANIMLRAEIIQSIRARMVAQDFTEFQTPILTASSPEGARDF 191

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQAPQQ+KQL+M SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 192 LVPARLHPGKFYALPQAPQQFKQLIMVSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDLE 251

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ + +E V++GVFEEFS    V  NFL I Y D++ +YG DKPDLR P  + 
Sbjct: 252 MSFVEQQDVFDAVEPVIKGVFEEFSE-KVVDANFLHISYADSMLKYGNDKPDLRIPFEIC 310

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT+ F  S+F +F+K  ++  G  V A+P     G+RA  DRMN WA+ +G PG+ YI 
Sbjct: 311 DVTDIFRGSDFSIFAK--NIEKGAVVRAVPGP-KCGSRAIADRMNSWAQGEGAPGMGYII 367

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +     G     GPVAK L     EAIRV   + DGD+ FF         S A  AR  I
Sbjct: 368 Y-----GEGEARGPVAKALGAEKAEAIRVAAGVGDGDAVFFACAPADDAASLAGRARVKI 422

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            Q+  +I+ N F F WI+DFP +E +    KIDF+HNPF+MPQGGM++L+  + L+IKA+
Sbjct: 423 GQDHDLIDKNLFRFAWIVDFPMFEADPSTGKIDFSHNPFSMPQGGMKALEEQNPLNIKAW 482

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG E++SG IRNH+ EVM +AF   G  K +V  +F  +  AF+ G PPHGGIA
Sbjct: 483 QYDLVCNGVELSSGAIRNHLPEVMYKAFEIAGYPKSIVNEKFPAMINAFRFGAPPHGGIA 542

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRIVML+    N+REV LFPM+    DL+M +PS V    L EL +R     KK
Sbjct: 543 PGIDRIVMLIADEPNIREVILFPMNGKAEDLMMAAPSEVDEAALAELHIRRAPQAKK 599


>gi|15604021|ref|NP_220536.1| aspartyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226169|sp|Q9ZE17|SYD_RICPR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3860712|emb|CAA14613.1| ASPARAGINYL-TRNA SYNTHETASE (aspS) [Rickettsia prowazekii]
 gi|292571740|gb|ADE29655.1| Aspartyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 605

 Score =  625 bits (1612), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 307/606 (50%), Positives = 418/606 (68%), Gaps = 12/606 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59
           MH+YRTH+C +L +S+VG  V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 1   MHKYRTHNCNELQLSNVGQEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNQQLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A  +  E V+ + G V++RS +TIN  + TG +E+ A +  + S +  LP  +  E+E
Sbjct: 61  YDASRLCYESVITVSGTVVARSLDTINNKLPTGYVEVLAMECIVESASSPLPFVINNEKE 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R+++I  +R  MIA  F E  TPILT+SSPEGARD
Sbjct: 121 APEESRLKHRFLDLRREKLHNNIILRSQVIAHIRHLMIARGFTELQTPILTSSSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRIHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDL 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+DI NT+E VL  +F +F+N    +  F+RI Y++++ +YG+DKPDLRNPII+
Sbjct: 241 EMSFVTQEDIFNTIEPVLYDLFTKFTNKTVSNTPFVRIPYNESMLKYGSDKPDLRNPIII 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F +  ++  G  V AIPA +     R+F D+M E+A S+G  GL Y
Sbjct: 301 SDVTEVFRDSNFTIFRE--NIKKGSVVHAIPAPQAASLPRSFFDKMIEFAISKGARGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +  ESG     GP++K L     E ++   +  +GD+ FF++    +        R 
Sbjct: 359 I--QFSESGE--AKGPLSKFLTGQQLEILKATANTSNGDAVFFVSDKKDEAVKLCGKVRI 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474
            + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +L
Sbjct: 415 KLGEELNLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L++ A+QYD+VCNG E++SG IRNH  E+M +AFS  G S E VE RFG + +AF+ G P
Sbjct: 475 LALTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSAEEVEQRFGAMIKAFRFGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  +
Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEEKALKELSIMLSPS 594

Query: 595 PKKILK 600
            +KI K
Sbjct: 595 SRKIHK 600


>gi|51473344|ref|YP_067101.1| aspartyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|62287549|sp|Q68XM3|SYD_RICTY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|51459656|gb|AAU03619.1| Aspartic acid translase [Rickettsia typhi str. Wilmington]
          Length = 605

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 308/606 (50%), Positives = 419/606 (69%), Gaps = 12/606 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59
           MH+YRTH+C +L +S+VG  V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 1   MHKYRTHNCNELQLSNVGQEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNQHLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A ++  E V+ + G V++RS  TIN  ++TG IE+ A +  + S +  LP  +  E+E
Sbjct: 61  DYASNLCYESVITVSGTVVARSEGTINNKLLTGHIEVLAVECIVESASSPLPFVINNEKE 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R+++I+ +R  MI   F E  TPILT+SSPEGARD
Sbjct: 121 APEESRLKHRFLDLRREKLHNNIILRSQVISHIRHLMIVRGFTEFQTPILTSSSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRIHPGKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDL 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+DI NT+E VL  +F +F++       F+RI Y++++ +YG+DKPDLRNPII+
Sbjct: 241 EMSFVTQEDIFNTIEPVLYDLFTKFTDKIVSKPPFVRIPYNESMLKYGSDKPDLRNPIII 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F +  ++  G  V AI A K     R+F D+M E+A S+G  GL+Y
Sbjct: 301 SDVTEIFRDSNFTIFRE--NIKKGSVVRAIHAPKAASLPRSFFDKMIEFAISEGAIGLSY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +  E+G V   GP++K L     E ++   +  +GD+ FF +    K        R 
Sbjct: 359 I--QFSETGEVK--GPLSKFLTKQQLEILKATSNTSNGDAVFFASDQKDKAAKLCGKVRI 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474
            + +EL ++  +CF+FCWI DFPFYE+NEE  KIDF+HNPF+MPQGG+++L+      +L
Sbjct: 415 KLGEELNLLEKDCFKFCWITDFPFYEFNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L++ A+QYD+VCNG E++SG IRNH  E+M +AFS  G S E V+ RFG + RAF+ G P
Sbjct: 475 LALTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSAEEVDKRFGAMIRAFKFGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM SPS V  + L+EL + +   
Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNSPSYVDEKALKELSIMLSPT 594

Query: 595 PKKILK 600
            +KI K
Sbjct: 595 SRKIHK 600


>gi|148284104|ref|YP_001248194.1| aspartyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|166225370|sp|A5CC91|SYD_ORITB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146739543|emb|CAM79272.1| aspartyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 597

 Score =  622 bits (1605), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 315/603 (52%), Positives = 417/603 (69%), Gaps = 15/603 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           MH+YRTH+CG+L ++ VG  V+LSGW++R R HGG++F+D+RDHYGI Q+V N D +   
Sbjct: 1   MHKYRTHTCGELSLAHVGLQVKLSGWLYRRRDHGGLLFIDLRDHYGIIQLVFNDDCSAVQ 60

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EI+K ++ E V+ ++G V++RS ETIN NI TG +E+      + S AEELPL + GE 
Sbjct: 61  AEISK-IKFETVITVEGAVVARSNETINKNISTGDVEVVVSSYVVESFAEELPLQINGEY 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E PE  R KYRFLDLR   LH+NIV R+++I  +R +M++  FIE  TPILTASSPEGAR
Sbjct: 120 EAPEETRLKYRFLDLRGARLHQNIVLRSKVIQELRNQMLSNGFIEFQTPILTASSPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDED R+DR PGEFYQLD
Sbjct: 180 DFLVPSRLHPGKFYALPQAPQQFKQLIMMSGFDKYFQIAPCFRDEDARADRSPGEFYQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EM+FV Q+D+   +E VL   F++FSN +  +  F RI YD+++ RYG+DKPDLRNPI 
Sbjct: 240 IEMAFVTQEDVFGLVEPVLYNTFKKFSNYSITNIPFPRITYDESMLRYGSDKPDLRNPIQ 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           + +VT+ F  SEF       S+N G  V AIPA       R+F D+M E+A+  G  GLA
Sbjct: 300 ISDVTDIFQCSEFTTLKD--SINCGAVVRAIPAPMSANKPRSFFDKMIEYAKHLGASGLA 357

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI     +  N    G +AK  +      I+  +  QDGD+ FFI          AA  R
Sbjct: 358 YI-----QFTNDGVKGSIAKFFDEALLARIKKLVKCQDGDAIFFICDKENDATKVAAKIR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----ND 473
             + +EL II  +C++FCW++DFPFY+ + E  KI F+HNPF+MPQGG+E+        D
Sbjct: 413 AKVGEELNIIKTDCYKFCWVIDFPFYQLDSEINKITFSHNPFSMPQGGIEAFNKAKTVED 472

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           LLSIKAFQYD+VCNG E++SG IRNH  ++M +AF+ VG SK+ V+ +FG + RAF  G 
Sbjct: 473 LLSIKAFQYDIVCNGVELSSGAIRNHKPDLMYKAFAIVGYSKDEVDKQFGAMIRAFCYGA 532

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA GIDRI+MLL  + N+REV  FPM+Q   DLLMG P+ V+ +QL EL L+++ 
Sbjct: 533 PPHGGIAPGIDRILMLLTNSVNIREVIAFPMNQQAEDLLMGCPAAVTDKQLHELQLKLIS 592

Query: 594 NPK 596
             +
Sbjct: 593 KER 595


>gi|262277376|ref|ZP_06055169.1| aspartyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224479|gb|EEY74938.1| aspartyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 595

 Score =  622 bits (1603), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 302/596 (50%), Positives = 413/596 (69%), Gaps = 6/596 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M  YRTH+CG+L  S     V LSGW+H+ R HG ++F+D+RD+YGI+Q V       F 
Sbjct: 1   MITYRTHTCGELNKSHKDKNVILSGWIHKKRDHGNLLFIDLRDNYGISQCVIEKGHKSFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             +    E V+ I+GLV+ RS+ETIN ++ TG+IE+S    EIL  A+ELPLPVF + +Y
Sbjct: 61  NIEKTSLETVVKIEGLVLERSSETINKDLKTGEIEISINNFEILGSAKELPLPVFLDEDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LDLRR  +HKNI+ R+ +I+ +R  M    F+E  TPILT+SSPEGARDF
Sbjct: 121 SEDIRLKYRYLDLRRKRIHKNIILRSEVISFIRDEMKKFGFLEFQTPILTSSSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQAPQQ+KQL+M +GFD+YFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLNPGKFYALPQAPQQFKQLIMVAGFDKYFQIAPCFRDEDARADRSPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+ + + +E +L  VFE+FSN   ++  F RI Y+ ++ +YGTDKPDLRNP+++ 
Sbjct: 241 MSFVNQNQVFDILEKLLSSVFEKFSNKKIINKVFPRIPYEQSMLKYGTDKPDLRNPLVIL 300

Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           +V+E F   +  F +F K++S   G  V +I  K      R+F D +++WARS+G  GLA
Sbjct: 301 DVSEIFKREDVKFEIFKKLVS--KGNIVRSIVTKQTVEKPRSFFDGIDKWARSEGASGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y  +  +  G ++G G + K  +  + + I    D + GDS FF  G   +     + AR
Sbjct: 359 YFSFE-ESDGKISGKGTIGKLFSEDSLKEIMKITDAEIGDSIFFACGSQSEVERILSLAR 417

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IA+EL +IN + F FCWI+D+P YE +E+ KKI F+HNPF+MPQG +E+L  ND L+I
Sbjct: 418 TKIAEELNLINKDEFAFCWIVDYPMYEVDEKTKKITFSHNPFSMPQGDIENLDFNDPLNI 477

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA+QYD+VCNG E++SG IRNH  ++M + FS  G SKE V+  F G+  AF  G PPHG
Sbjct: 478 KAYQYDIVCNGIELSSGAIRNHKPDLMYKLFSVAGYSKEEVDTEFSGMINAFSYGAPPHG 537

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIA GIDRI+MLL   KN+REV++FPM+QN  DL+M +PS+V   QL++L ++ ++
Sbjct: 538 GIAPGIDRIIMLLADEKNIREVTMFPMNQNAQDLMMNAPSSVKESQLKDLNIKTIK 593


>gi|294085457|ref|YP_003552217.1| aspartyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665032|gb|ADE40133.1| aspartyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 590

 Score =  619 bits (1596), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 307/597 (51%), Positives = 403/597 (67%), Gaps = 9/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C  L  + VG  VR+SGW++R R HG ++F+D+RDHYG+TQ VA+   A F 
Sbjct: 1   MHIYRTHTCAALTEAAVGEKVRISGWINRKRDHGQLVFIDVRDHYGLTQCVADSSDASFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I ++ R E V+ I G V+ RS +TIN  + TG IE+  +  E+ S A+ LPL V  + + 
Sbjct: 61  IVEATRLESVVTITGEVVRRSDDTINTALPTGHIEVRIESFEVQSAADTLPLQVNSDEDS 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR+LDLRR   H NI+ R +II S+R RM+ + F E  TPILTASSPEGARDF
Sbjct: 121 GEETRLRYRYLDLRRSRPHANIMLRAQIIQSIRARMVDQGFTEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQAPQQ+KQL+M SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPARLHPGKFYALPQAPQQFKQLIMVSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ N +E V+RGVFEEFS+ +    +++ I + +++ +YG DKPDLR P  + 
Sbjct: 241 MSFVEQQDVFNAVEPVIRGVFEEFSDKD-CGEDWVHIPFAESMLKYGNDKPDLRIPFEIS 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VTE F  S F +F+K  ++  G  V A+P     G+RA  DRMN WA+ +G PG+ YI 
Sbjct: 300 DVTEIFRDSGFSIFAK--NIEKGAVVRAVPGP-KCGSRAIADRMNSWAQGEGAPGMGYII 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +     G     GPVAK L     E IRV++  +DGD+ FF   +P    S A  AR  I
Sbjct: 357 Y-----GEGEARGPVAKALGAEKAEEIRVQVGAEDGDAVFFACAEPDAAASLAGRARVKI 411

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            Q+  +I+ + F F WI+DFP +E +E   KIDF+HNPF+MPQGGM++L   + L IKA+
Sbjct: 412 GQDQKLIDESVFRFAWIVDFPMFEKDEVTGKIDFSHNPFSMPQGGMQALLEMNPLDIKAW 471

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG E++SG IRNH+ EVM +AF   G    VV+++F  +  AF+ G PPHGGIA
Sbjct: 472 QYDLVCNGVELSSGAIRNHLPEVMYKAFEIAGYDNSVVDDKFPAMINAFRFGAPPHGGIA 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDR+VML+    N+REV LFPM+    DL+M +PS V    L EL +R    PKK
Sbjct: 532 PGIDRMVMLIADEPNIREVILFPMNGKAEDLMMAAPSEVDDAALNELHIRRAPVPKK 588


>gi|254455582|ref|ZP_05069011.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082584|gb|EDZ60010.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 594

 Score =  616 bits (1589), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 291/594 (48%), Positives = 408/594 (68%), Gaps = 7/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M +YRTH C +L   D+   + +SGW+++ R HG I+F+D+RD+YGITQ + + ++  F 
Sbjct: 1   MSKYRTHKCNELRKQDLDKEISISGWINKKRDHGNILFIDLRDNYGITQCIIDKENKNFL 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             +  + E V+ IDG V+ RS+ET+N +I TG IE+     E+L   +ELP+PVF ++EY
Sbjct: 61  ELEKTQLETVVKIDGKVVERSSETVNKDIETGDIEVVINNFEVLGTCKELPMPVFSDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYRFLDLRR  +H+NI+ R+++I+ +R  M +  F+E  TPILT+SSPEGARDF
Sbjct: 121 AEEIRLKYRFLDLRRKKIHENIILRSKVISFIRNEMTSAGFLEFQTPILTSSSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLNPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+ N +E +L   F++FS+   + + F +I Y DA+ +YG+DKPDLRNP++++
Sbjct: 241 MSFVEQEDVFNVVEKLLVNTFKKFSDKKLMYDQFPKISYADAMLKYGSDKPDLRNPLVIN 300

Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           ++TE F   +  F +F K+     G +V  I  K      R+F D +++WA+ QG  GLA
Sbjct: 301 DITEVFSREDVSFEIFKKL--TKSGSKVRCISTKNTKDKPRSFFDNIDKWAKEQGASGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y  +  ++ G ++  GP+ K  +      I  + + + GDS F   G   +     A AR
Sbjct: 359 Y--FTFEDDGELSAKGPIGKFFSKEALLEIMKKTNSEVGDSIFMACGKLNELEKITALAR 416

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           + IAQ+L +IN N F FCWI+D+P +E +E+  KI F+HNPF+MPQG +   +  D L+I
Sbjct: 417 DKIAQDLDLINDNIFAFCWIVDYPMFERDEKTNKIGFSHNPFSMPQGDLTDKQLEDPLNI 476

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+QYD+VCNG E++SG IRNH  E+M + FS  G  K+ V+ +F G+  A   G PPHG
Sbjct: 477 LAYQYDIVCNGIELSSGAIRNHKPELMYRLFSIAGYDKKQVDEKFSGMINALSFGAPPHG 536

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA GIDRIVMLL   KN+REV++FPM+QN  DL+M +PS V+ EQL+EL L +
Sbjct: 537 GIAPGIDRIVMLLANEKNIREVTMFPMNQNAQDLMMKAPSEVNEEQLKELNLAL 590


>gi|71083425|ref|YP_266144.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|97196785|sp|Q4FMP8|SYD_PELUB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71062538|gb|AAZ21541.1| asparaginyl-tRNA synthetase [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 594

 Score =  615 bits (1587), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 289/594 (48%), Positives = 413/594 (69%), Gaps = 7/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M++YRTH+C +L +   G  V LSGW+++ R HG ++F+D+RD+YG+TQ + +  +  F 
Sbjct: 1   MNKYRTHTCSELTIDSRGKDVVLSGWINKKRDHGNLLFIDLRDNYGMTQCIIDKSNQNFN 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + ++ E V+ I+G V+ R+ ETIN ++ TG+IE++    E+L   +ELP+PVF ++EY
Sbjct: 61  SLEKIQLESVIKINGKVVERTKETINTDLQTGEIEVNINSFEVLGTCKELPMPVFSDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYRFLDLRR  +H NI+ R+++I+ +R  M    F+E  TPILT+SSPEGARDF
Sbjct: 121 AEEIRLKYRFLDLRRKKIHDNIILRSKVISFIRSEMSKLGFLEFQTPILTSSSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLNPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  VF++FS    +   F RI Y++++ +YG+DKPDLRNP+I+ 
Sbjct: 241 MSFVEQEDVFQVVEKLIVNVFKKFSEKKLMYEKFPRIPYEESMLKYGSDKPDLRNPLIIS 300

Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           +++  F+  +  F +F K+  V  G +V  I  K      R+F D +++WA+ QG  GLA
Sbjct: 301 DLSNIFIRDDVTFEIFKKL--VKSGSKVRCIVTKNTKDKPRSFFDNIDKWAKEQGASGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y  + +++  N++  GPV K  +    E I      + GDS FF  G         + AR
Sbjct: 359 Y--FTIEKEENISARGPVGKFFSKEALEEIMKITGAEIGDSIFFACGKINDVEKITSLAR 416

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           + IA++L +I+ N F FCW++D+P +E NE   KI+F+HNPF+MPQG ++ +  ++ L+I
Sbjct: 417 DKIAKDLKLIDENTFAFCWVVDYPMFEKNEVTNKIEFSHNPFSMPQGDLKDIDFDNPLNI 476

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA+QYD+VCNG E++SG IRNH+ E+M + FS  G  KE V+ +F G+  A   G PPHG
Sbjct: 477 KAYQYDIVCNGIELSSGAIRNHVPELMYKLFSIAGYQKEQVDEKFSGMINALSYGAPPHG 536

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA GIDRIVMLL   KN+REV++FPM+QN  DL+M +PS V+ EQL+ELGL +
Sbjct: 537 GIAPGIDRIVMLLANEKNIREVTMFPMNQNAQDLMMNAPSNVNEEQLKELGLAL 590


>gi|288958468|ref|YP_003448809.1| aspartyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288910776|dbj|BAI72265.1| aspartyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 608

 Score =  615 bits (1585), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 309/606 (50%), Positives = 407/606 (67%), Gaps = 17/606 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L   + G  VRLSGW++R R HG ++F+D+RDHYG+TQ V +  +  FE
Sbjct: 1   MHPYRTHTCGQLREENAGETVRLSGWMNRKRDHGQLLFIDLRDHYGLTQCVVDTSNPAFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  ++ E V+ + G V+ R+AETIN  + TG+IE+   ++ +   AE++PL V  + + 
Sbjct: 61  VANRLKLESVITVTGKVVKRTAETINDKLPTGRIEMQIAELAVEGEAEQIPLQVNQDTDA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YRFLDLRR+ +H+NI+ R+R+I S R RMI + F E  TPILTASSPEGARD+
Sbjct: 121 GEDVRLRYRFLDLRRERIHENIMLRSRVIASARRRMIDQGFTEFQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR + G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 181 LVPSRNHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN------NFLRICYDDAIRRYGTDKPDLR 294
           MSFV Q+D+   +E VL G+F+EF      S        F RI Y +++ +YG DKPDLR
Sbjct: 241 MSFVTQEDVFAAIEPVLHGIFDEFGGFRRDSKPAIDGLPFRRISYAESMLKYGNDKPDLR 300

Query: 295 NPIIMHNVTEHFVHS--EFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQ 351
           NP+++ +VTE F     EFR F + L    G  V AI A K     R+F D++N+WAR  
Sbjct: 301 NPLVITDVTEVFKRDDVEFRAFKQTLEK--GGVVRAIRAPKVSDRPRSFFDKLNDWARGL 358

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G PGL YI     E+G   G GP+AK +      A+R    ++DGD+ FF+   P     
Sbjct: 359 GAPGLGYIVM---EAG--GGKGPIAKFVPEAAQAALRELAGLEDGDAIFFVCDQPGPAAK 413

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            A  AR  I +EL +I  N F FCWI+DFP YE +EE  K+ F+HNPF+MPQGG+++L+ 
Sbjct: 414 LAGFARTRIGEELDLIEKNAFRFCWIVDFPMYELDEETNKVIFSHNPFSMPQGGLKALET 473

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            + L IKA+QYD+VCNG E++SG IRNH+ EVM +AF   G   E +E RFGG+  AF+ 
Sbjct: 474 MNPLDIKAYQYDIVCNGVELSSGAIRNHLPEVMYKAFEIAGYPPEELEARFGGMLSAFKL 533

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG A GIDRIVMLL    N+REV  FP++Q   DLLM +P+ V   +LREL L++
Sbjct: 534 GAPPHGGSAPGIDRIVMLLADEPNIREVIAFPLNQRAEDLLMQAPAPVDTARLRELHLKL 593

Query: 592 -VENPK 596
            +  PK
Sbjct: 594 DLPKPK 599


>gi|149197385|ref|ZP_01874436.1| aspartyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149139403|gb|EDM27805.1| aspartyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 596

 Score =  615 bits (1585), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 299/602 (49%), Positives = 410/602 (68%), Gaps = 9/602 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+HSC DL   D G   RLSGW+HRVR  GGI+F+D+RDHYGITQVV NP      
Sbjct: 1   MHTYRSHSCNDLRKDDAGQGARLSGWIHRVRDMGGIVFIDLRDHYGITQVVINPQEDFHM 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                + E V+ + G V+ R  ET N+ I TG++EL A+++++ S+ E +P  V  E E 
Sbjct: 61  DVHHWKLESVITVTGDVVLRDEETFNSKIPTGEVELIAKELKMESLVEHMPFNVALEMEM 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE++R ++R+LDLR   +H NI+ R +II S+R RM    F E  TPILTASSPEGARDF
Sbjct: 121 PEAMRLEHRYLDLRTSRMHHNIITRAKIIASLRQRMTGLGFNEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 181 LVPSRLNPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF  QDD+   +E V+ G F+EF+   T    F+RI Y +++ +YG+DKPDLRNPII+ 
Sbjct: 241 MSFATQDDVFKVIEEVIIGTFQEFTPWTTDEKEFVRIPYKESMLKYGSDKPDLRNPIIIS 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +++  FV SEF  F+ +  V  G  V A+      G +R F D+M  +A+S G  GL Y+
Sbjct: 301 DISPAFVDSEFTAFASV--VKKGGVVRAMKVSNHAGASRKFHDKMITFAQSVGSKGLGYL 358

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +   E+G +    P+AK L+     +I+   D+QDGD  +F+A      C   A  R+ 
Sbjct: 359 IF---ENGELR--SPIAKFLSEETINSIKEACDVQDGDVVYFVADKEKNACRICAAVRDE 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + Q L +++   F+FCWI+D+P +E+N+E KK++F+HNPF+MPQG ME+L+  D L + A
Sbjct: 414 LGQRLNLLDEKEFKFCWIVDYPMFEYNDETKKVEFSHNPFSMPQGEMEALETMDPLDVLA 473

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYDLVCNG E++SG +RNH  ++ML+AF   G + E VE+ F G+  AF+ G PPH GI
Sbjct: 474 WQYDLVCNGIELSSGAVRNHRPDIMLKAFGIAGYAAEEVESSFSGMINAFRHGAPPHAGI 533

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKKI 598
           A G+DR+VML+LG  ++RE+  FP++ +  DLLM +PS VS +QL+EL L++ +  PK  
Sbjct: 534 APGVDRMVMLILGEPSIREIIAFPLNGSAQDLLMNAPSPVSQDQLKELHLKLNLPKPKPK 593

Query: 599 LK 600
           ++
Sbjct: 594 MQ 595


>gi|73667286|ref|YP_303302.1| aspartyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|97196669|sp|Q3YRF1|SYD_EHRCJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|72394427|gb|AAZ68704.1| aspartyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 590

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 303/595 (50%), Positives = 406/595 (68%), Gaps = 9/595 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACF 59
           M+ YRTH C +L    +   V LSGWV+R R HG IIF+D+RDHYGITQ+V N  D+  F
Sbjct: 1   MNIYRTHLCNELREEHINQEVILSGWVYRKRDHGKIIFVDLRDHYGITQLVFNEADNEIF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           ++   ++ E V+ I G V++R + TIN  + TG IE+    + I S A  LP+ +   +E
Sbjct: 61  QLISYLKLESVITIKGTVVARDSSTINTTVSTGLIEVVVNHVTIESEANLLPMNIASTQE 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           YPE IRFKYRFLDLRRD +  NI+ R+++I  +R  M    FIE  TPILT+SSPEGARD
Sbjct: 121 YPEDIRFKYRFLDLRRDKVKHNIILRSKVIAELRKSMENMGFIEIQTPILTSSSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR++ G FYALPQAPQ +KQ+LM SGFD+YFQIAPCFRDED R+DR PGEFYQLDM
Sbjct: 181 YLVPSRIHHGKFYALPQAPQLFKQILMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ N +E VL  +F +FS+  T+   F RI Y +A+  YG+DKPDLRNP+I+
Sbjct: 241 EMSFVTQEDVFNVIEPVLLNIFSKFSS-KTIHKEFPRISYHNAMLYYGSDKPDLRNPLII 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S+F +F+   ++  G  V AIPA     N R+F D   E+A++ G  GL Y
Sbjct: 300 QDVTEIFRDSQFNIFNS--NIKKGMVVRAIPAPKTANNPRSFFDNKIEFAKTLGAQGLGY 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D S      GP+AK L+      I+   ++Q GDS FF++    K   FA + R 
Sbjct: 358 ITFNDDSSAK----GPIAKFLDEERLNKIKSICNLQTGDSVFFVSETEDKAAEFAGEIRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  EL +I  + F FCW++DFP+++++++EK I F HNPF+MPQGG+E+L   D LSI 
Sbjct: 414 ILGTELNLIEPDTFRFCWVVDFPYFKYDKKEKSIGFFHNPFSMPQGGLEALNNQDPLSIL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG EI+SG IRNH  ++M +AFS  G ++E+V+ +F  L RAF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIEISSGAIRNHKLDIMYKAFSIAGYTQEMVDKKFNSLTRAFKFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           IA GIDR+VMLL  A N+REV  FP++Q+  DLLMG+PS +  E L+ L L I +
Sbjct: 534 IAPGIDRMVMLLADATNIREVICFPLNQSGEDLLMGAPSEIDTEHLKLLSLNITK 588


>gi|91762152|ref|ZP_01264117.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717954|gb|EAS84604.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 594

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 289/594 (48%), Positives = 411/594 (69%), Gaps = 7/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M++YRTH+C +L +   G  V LSGW+++ R HG ++F+D+RD+YG+TQ + +  +  F 
Sbjct: 1   MNKYRTHTCSELTIDSSGKDVVLSGWINKKRDHGNLLFIDLRDNYGMTQCIIDKSNENFN 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + ++ E V+ I G V+ R+ ETIN ++ TG+IE++    E+L   +ELP+PVF ++EY
Sbjct: 61  SLEKIQLESVIKIKGKVVERTKETINTDLQTGEIEVNINSFEVLGTCKELPMPVFSDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYRFLDLRR  +H NI+ R+++I+ +R  M    F+E  TPILT+SSPEGARDF
Sbjct: 121 AEEIRLKYRFLDLRRKNIHDNIILRSKVISFIRGEMSKLGFLEFQTPILTSSSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLNPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  VF++FS    +   F RI Y++++ +YG+DKPDLRNP+I+ 
Sbjct: 241 MSFVEQEDVFQVVEKLIVNVFKKFSEKKLMYEKFPRIPYEESMLKYGSDKPDLRNPLIIS 300

Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           +++  F   +  F +F K+  V  G +V  I  K      R+F D +++WA+ QG  GLA
Sbjct: 301 DLSNIFTRDDVTFEIFKKL--VKSGSKVRCIVTKNTKDKPRSFFDNIDKWAKEQGASGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y  + +++  N++  GPV K  +    E I      + GDS FF  G         + AR
Sbjct: 359 Y--FTIEKEENISAKGPVGKFFSKEALEEIMKITGAEIGDSIFFACGKINDVEKITSLAR 416

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           + IA++L +I+ N F FCW++D+P +E NE   KI+F+HNPF+MPQG ++ +  ++ L+I
Sbjct: 417 DKIAKDLKLIDENTFAFCWVVDYPMFEKNEVTNKIEFSHNPFSMPQGDLKDIDFDNPLNI 476

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA+QYD+VCNG E++SG IRNH+ E+M + FS  G  KE V+ +F G+  A   G PPHG
Sbjct: 477 KAYQYDIVCNGIELSSGAIRNHVPELMYKLFSIAGYQKEQVDEKFSGMINALSYGAPPHG 536

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA GIDRIVMLL   KN+REV++FPM+QN  DL+M +PS V+ EQL+ELGL +
Sbjct: 537 GIAPGIDRIVMLLANEKNIREVTMFPMNQNAQDLMMNAPSNVNEEQLKELGLAL 590


>gi|88658180|ref|YP_507154.1| aspartyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|123722796|sp|Q2GHC9|SYD_EHRCR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|88599637|gb|ABD45106.1| aspartyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 590

 Score =  613 bits (1581), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 303/595 (50%), Positives = 407/595 (68%), Gaps = 9/595 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACF 59
           M+ YRTH C  L    +   V LSGW++R R HG IIF+D+RDHYGITQ+V N  D+  F
Sbjct: 1   MNIYRTHLCDQLRKEHINQEVTLSGWIYRKRDHGKIIFVDLRDHYGITQLVFNEADNQNF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           ++   +R E V+ + G+V++R + TIN  + TG IE+  + + I   A+ LPL +   ++
Sbjct: 61  QLITHLRLESVITVKGIVVARDSSTINTAVSTGFIEVVVKHVIIEGEADPLPLNITSTQD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           YPE IR KYRFLDLRRD +  NI+ R++II+ +R  M A  FIE  TPILT+SSPEGARD
Sbjct: 121 YPEEIRLKYRFLDLRRDKVKNNIILRSKIISELRKSMEAMGFIEIQTPILTSSSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR++ G FYALPQAPQ +KQ+LM SGFD+YFQIAPCFRDED RSDR PGEFYQLD+
Sbjct: 181 YLVPSRIHHGKFYALPQAPQLFKQILMVSGFDKYFQIAPCFRDEDARSDRSPGEFYQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ N +E VL  VF +FSN  T+   F RI Y DA+  YG+DKPDLRNP+I+
Sbjct: 241 EMSFVSQEDVFNVIEPVLLNVFSKFSN-KTIDKEFPRISYHDAMLHYGSDKPDLRNPLII 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S+F +F+   ++  G  V AIPA     N R+F D   E+A++ G  GL Y
Sbjct: 300 QDVTEIFRDSQFNIFNS--NIKQGMVVRAIPAPNTATNPRSFFDNKIEFAKTLGAQGLGY 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D S      GP+AK L+      I+   ++Q GDS FF++    K    A + R 
Sbjct: 358 ITFNDDFSAK----GPIAKFLDEERLNRIKSICNLQPGDSVFFVSETEDKATELAGEVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL +I  + F FCWI+DFP+++++++EK I+F HNPF+MPQGG+E+L   + L I 
Sbjct: 414 LLGKELNLIEKDTFRFCWIIDFPYFKYDKKEKSINFFHNPFSMPQGGLEALNNQNPLDIL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG EI+SG IRNH  ++M +AFS  G +KE+V+ +F  L RAF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIEISSGAIRNHKLDIMYKAFSIAGYTKEMVDQKFNSLTRAFKFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           IA GIDR+VMLL  A N+REV  FP++Q+  DLLM +PS +  E L+ L L I +
Sbjct: 534 IAPGIDRMVMLLADATNIREVICFPLNQSGEDLLMSAPSEIDKEHLKLLSLSITK 588


>gi|57239393|ref|YP_180529.1| aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579362|ref|YP_197574.1| aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81819221|sp|Q5HAL5|SYD_EHRRW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|57161472|emb|CAH58398.1| aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417988|emb|CAI27192.1| Aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 590

 Score =  613 bits (1581), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 301/595 (50%), Positives = 413/595 (69%), Gaps = 9/595 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACF 59
           M+ YRTH C +L    +   V LSGWV+R R HG IIF+D+RDHYGITQ+V N  D+  F
Sbjct: 1   MNVYRTHLCNELREEHIDQTVTLSGWVYRKRDHGKIIFVDLRDHYGITQLVFNDSDTTIF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           ++  ++R E V+ I G+V +R + TIN  + TG IE+    I I + +E LP+ +   ++
Sbjct: 61  QLITTLRLESVITIKGIVKARDSSTINETLDTGSIEVIVSSINIETASEILPINIASMQD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           Y E IR  YRFLDLRRD +  NI+ R+++I  +R  M    FIE  TPILT+SSPEGARD
Sbjct: 121 YSEDIRLTYRFLDLRRDKVKNNIILRSKVITEIRKSMENMGFIEIQTPILTSSSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR++ G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 YLVPSRIHHGKFYALPQAPQLFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+DI N +E V+  +F +FSN  T++  F +I Y DA+  YG+DKPDLRNP+++
Sbjct: 241 EMSFVTQEDIFNIIEPVMINIFSKFSN-KTINKEFPKISYHDAMLYYGSDKPDLRNPLVI 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  SEF++F+   ++  G  V AIPA     N R+F D   E+A++ G  GL Y
Sbjct: 300 QDVTEIFRDSEFKIFNS--NIKQGMVVRAIPAPNTAHNPRSFFDSKIEFAKTLGAQGLGY 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I + +D+S      GP+AK L+    + I++  +++ GDS FF++    K   FA + R 
Sbjct: 358 ITF-IDDS---LAKGPIAKFLDKDRLDNIKLICNIKAGDSVFFVSEIADKAALFAGEVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL +I  N F+FCW++DFP+++++ +EK I+F HNPF+MPQGG+E+L+  D L+I 
Sbjct: 414 LLGKELNLIEENTFKFCWVIDFPYFKYDHKEKSINFFHNPFSMPQGGLEALENQDPLNIL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG EI+SG IRNH   +M +AFS  G +KE+V+ +F  L RAF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIEISSGAIRNHKLNIMYKAFSIAGYTKEMVDEKFKALTRAFKFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           IA GIDRIVMLL    N+REV  FP++Q+  DLLMGSPS +  + L+ L L I++
Sbjct: 534 IAPGIDRIVMLLADVPNIREVICFPLNQSGEDLLMGSPSEIDNDHLKLLSLNIIK 588


>gi|68171185|ref|ZP_00544591.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|67999379|gb|EAM86022.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Ehrlichia
           chaffeensis str. Sapulpa]
          Length = 590

 Score =  612 bits (1579), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 304/595 (51%), Positives = 407/595 (68%), Gaps = 9/595 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACF 59
           M+ YRTH C  L    +   V LSGW++R R HG IIF+D+RDHYGITQ+V N  D+  F
Sbjct: 1   MNIYRTHLCDQLRKEHINQEVTLSGWIYRKRDHGKIIFVDLRDHYGITQLVFNEADNQNF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           ++   +R E V+ + G+V++R + TIN  + TG IE+  + + I   A+ LPL +   ++
Sbjct: 61  QLITHLRLESVITVKGIVVARDSSTINTAVSTGFIEVVVKHVIIEGEADPLPLNITSIQD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           YPE IR KYRFLDLRRD +  NI+ R++II+ +R  M A  FIE  TPILT+SSPEGARD
Sbjct: 121 YPEEIRLKYRFLDLRRDKVKNNIILRSKIISELRKSMEAMGFIEIQTPILTSSSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR++ G FYALPQAPQ +KQ+LM SGFD+YFQIAPCFRDED RSDR PGEFYQLD+
Sbjct: 181 YLVPSRIHHGKFYALPQAPQLFKQILMVSGFDKYFQIAPCFRDEDARSDRSPGEFYQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ N +E VL  VF +FSN  T+   F RI Y DA+  YG+DKPDLRNP+I+
Sbjct: 241 EMSFVSQEDVFNVIEPVLLNVFSKFSN-KTIDKEFPRISYHDAMLHYGSDKPDLRNPLII 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S+F +F+   ++  G  V AIPA     N R+F D   E+A++ G  GL Y
Sbjct: 300 QDVTEIFRDSQFNIFNS--NIKQGMVVRAIPAPNTATNPRSFFDNKIEFAKTLGAQGLGY 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D S      GP+AK L+      I+   ++Q GDS FFI+    K    A + R 
Sbjct: 358 ITFNDDFSAK----GPIAKFLDEERLNRIKSICNLQPGDSVFFISETEDKATELAGEVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL +I  + F FCWI+DFP+++++++EK I+F HNPF+MPQGG+E+L   + L I 
Sbjct: 414 LLGKELNLIEKDTFRFCWIIDFPYFKYDKKEKSINFFHNPFSMPQGGLEALNNQNPLDIL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG EI+SG IRNH  ++M +AFS  G +KE+V+ +F  L RAF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIEISSGAIRNHKLDIMYKAFSIAGYTKEMVDQKFNSLTRAFKFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           IA GIDR+VMLL  A N+REV  FP++Q+  DLLM +PS +  E L+ L L I +
Sbjct: 534 IAPGIDRMVMLLADATNIREVICFPLNQSGEDLLMSAPSEIDKEHLKLLSLSITK 588


>gi|58617416|ref|YP_196615.1| aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|81311310|sp|Q5FG09|SYD_EHRRG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|58417028|emb|CAI28141.1| Aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 590

 Score =  608 bits (1569), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 298/595 (50%), Positives = 413/595 (69%), Gaps = 9/595 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACF 59
           M+ YRTH C +L    +   V LSGWV+R R HG IIF+D+RDHYGITQ+V N  D+  F
Sbjct: 1   MNVYRTHLCNELREEHIDQTVTLSGWVYRKRDHGKIIFVDLRDHYGITQLVFNDSDTTIF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           ++  ++R E V+ I G+V +R + TIN  + TG IE+    I I + ++ LP+ +   ++
Sbjct: 61  QLITTLRLESVITIKGIVKARDSSTINETLDTGSIEVIVSSINIETASDILPINIASMQD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           Y E IR  YRFLDLRRD +  NI+ R+++I  +R  M    FIE  TPILT+SSPEGARD
Sbjct: 121 YSEDIRLTYRFLDLRRDKVKNNIILRSKVITEIRKSMENMGFIEIQTPILTSSSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR++ G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 YLVPSRIHHGKFYALPQAPQLFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+DI N +E ++  +F +FS+  T++  F +I Y DA+  YG+DKPDLRNP+++
Sbjct: 241 EMSFVTQEDIFNIIEPLMINIFSKFSS-KTINKEFPKISYHDAMLYYGSDKPDLRNPLVI 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  SEF++F+   ++  G  V AIPA     N R+F D   E+A++ G  GL Y
Sbjct: 300 QDVTEIFRDSEFKIFNS--NIKQGMVVRAIPAPNTAHNPRSFFDSKIEFAKTLGAQGLGY 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I + +D+S      GP+AK L+    + I++  +++ GDS FF++    K   FA + R 
Sbjct: 358 ITF-IDDS---LAKGPIAKFLDKDRLDNIKLICNIKAGDSVFFVSEIADKAALFAGEVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL +I  N F+FCW++DFP+++++ +EK I+F HNPF+MPQGG+E+L+  D L+I 
Sbjct: 414 LLGKELNLIEENTFKFCWVIDFPYFKYDHKEKSINFFHNPFSMPQGGLEALENQDPLNIL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG EI+SG IRNH   +M +AFS  G +KE+V+ +F  L RAF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIEISSGAIRNHKLNIMYKAFSIAGYTKEMVDEKFKALTRAFKFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           IA GIDRIVMLL    N+REV  FP++Q+  DLLMGSPS +  + L+ L L I++
Sbjct: 534 IAPGIDRIVMLLADVPNIREVICFPLNQSGEDLLMGSPSEIDNDHLKLLSLNIIK 588


>gi|88606895|ref|YP_504813.1| aspartyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|123722838|sp|Q2GLD8|SYD_ANAPZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|88597958|gb|ABD43428.1| aspartyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 598

 Score =  607 bits (1564), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 306/605 (50%), Positives = 403/605 (66%), Gaps = 11/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSAC 58
           M+ YRTH C  L +S VG  V LSGW+ R R HGGI+F+D+RD YGITQ+V N   D   
Sbjct: 1   MNMYRTHLCNALNLSHVGEEVTLSGWIFRKRDHGGILFIDLRDFYGITQLVLNESSDQEL 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F  A+S+  E V+ + G V +RS +TIN ++ TG +E++   +   S A+ LP+ V    
Sbjct: 61  FNYARSIGLESVITVKGTVAARSEDTINTSLSTGHVEVAVHTLVTESAADALPIHVPTST 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
            +PE +R KYRFLDLR D +  N++ R+ +I+ MR  M +  FIE  TPILTASSPEGAR
Sbjct: 121 NHPEDLRLKYRFLDLRCDKVKSNMLLRSAVISEMRKAMESRGFIEVQTPILTASSPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV+ G FYALPQAPQ +KQLLMASGFD+YFQIAPCFRDED R+DR PGEFYQLD
Sbjct: 181 DYLVPSRVHAGKFYALPQAPQIFKQLLMASGFDKYFQIAPCFRDEDARADRSPGEFYQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV Q+D+ + ME VLR +F +F+   +VS  F RI Y DA+ RYGTDKPDLRNPII
Sbjct: 241 VEMSFVTQEDVFSVMEPVLRDIFTKFAGNRSVSPTFPRITYKDAMLRYGTDKPDLRNPII 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLA 357
           + +V+E F+ S F+ F +   V  G  V AIPA K     R+F D   E+A+  G  GL 
Sbjct: 301 IADVSEVFLRSNFKTFQE--GVARGMVVRAIPAPKTSEHPRSFFDSKVEYAKKIGARGLG 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI +  D +      GPVAK L+      I+    +  GDS FF++    K    +   R
Sbjct: 359 YITFSTDNTVK----GPVAKFLSDTELANIQTLAGVGPGDSVFFVSDAADKAAELSGSVR 414

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  EL +I  + F+FCWI+DFP++++  E  K+ F+HNPF+MPQGG+++L  ++ L I
Sbjct: 415 ELLGTELNLIEKDTFKFCWIVDFPYFQY--ENGKLAFSHNPFSMPQGGLDALSSSNPLDI 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+QYD+VCNG EI+SG IRNH  +++ +AFS VG S E V+  FG L RAF+ G+PPHG
Sbjct: 473 VAYQYDIVCNGIEISSGAIRNHKLDILYKAFSMVGYSPEAVDAEFGALTRAFRFGVPPHG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           GIA G+DRIVMLL    N+RE+  FP++Q   DLLMG+PS V+   L+EL L +   PK 
Sbjct: 533 GIAPGVDRIVMLLADVPNIREIIYFPLTQMGEDLLMGAPSEVNQSHLKELSLALNITPKA 592

Query: 598 ILKIS 602
             K S
Sbjct: 593 AGKTS 597


>gi|281358726|ref|ZP_06245203.1| aspartyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281314852|gb|EFA98888.1| aspartyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 599

 Score =  606 bits (1563), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 304/598 (50%), Positives = 406/598 (67%), Gaps = 9/598 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M++YRT++CG+L  ++VG  VRLSGW+H VR HGG+IF+D+RDHYGITQVV +P+ A ++
Sbjct: 1   MNKYRTNTCGELRKANVGETVRLSGWIHSVRDHGGVIFIDLRDHYGITQVVIDPECAFYQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             +  R E V+  DG V++RS  T+N  + TG+IE+ A  +EIL  AE +P  +  +   
Sbjct: 61  ALERWRVETVVRFDGEVIARSESTVNPKLATGEIEIKATDMEILGDAEVIPFLIAKDDGA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE++R KYRFLDLRRD LH+NI+ R+++I  MR  M    F E  TPILTASSPEGARD+
Sbjct: 121 PEAMRLKYRFLDLRRDELHRNIMLRSQVIAEMRRYMTTNGFNEFQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDDI   +E +L  VF +FS        F RI Y +A+RR+G+DKPDLRNP+ M 
Sbjct: 241 MSFVEQDDIFAVIEGLLEDVFGKFSTKEFTHAPFPRIPYREAMRRFGSDKPDLRNPLEMI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           +V+E F    F+ F+ +  V  G  V AI A K  G  R F D M ++A+  G  G+AYI
Sbjct: 301 DVSEQFRDCGFKAFAGV--VANGGVVRAIKAPKVAGKPRKFFDDMIKFAQENGAKGMAYI 358

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            W   E G  +   P+ K L      A++    ++ GD+ FF+A                
Sbjct: 359 IW--SEEGEKS---PIVKFLTPEILAALKTAGGVETGDALFFLADAEKLVQKIGGAVIPE 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + ++L +I+ N F+FCWI+DFP +E +EE     F+HNPF+MPQGGM++L   + L I A
Sbjct: 414 LGRQLELIDPNVFKFCWIVDFPMFEEDEETGATVFSHNPFSMPQGGMDALLNKNPLDILA 473

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  EVM +AF   G  + VV+++FGG+  AF+ G PPHGGI
Sbjct: 474 YQYDIVCNGIELSSGAIRNHQPEVMYKAFEIAGYDRSVVDDKFGGMINAFKLGAPPHGGI 533

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VMLL    N+REV  FP +Q   DL+M +P+ VS++QLREL +  V+ PKK
Sbjct: 534 APGVDRMVMLLADEPNIREVIAFPFNQQAQDLMMNAPAEVSIKQLRELHIE-VKLPKK 590


>gi|328883608|emb|CCA56847.1| Aspartyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 602

 Score =  605 bits (1559), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 298/592 (50%), Positives = 402/592 (67%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                  E V+ IDG V+SR AE +NA++ TG+IE+    +E+L  A+++P  +  +   
Sbjct: 61  ALDKQTKESVVRIDGTVVSRGAENVNADLPTGEIEVEVGAVEVLGAAQQIPFTINADDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF  G  V++ F RI + +++ +YG DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGGGRHVTSPFPRIPFRESMLKYGNDKPDLRTSLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           ++T+ F  SEF+ F+       G  V A+     G   R F D + ++A S G  GLA++
Sbjct: 301 DITDVFEASEFKAFA-------GKHVRALAVPNTGDQPRKFFDGLGDFAVSLGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E GN A  GP+AK L   N + +  RL ++ G + FF AGD  +        R  
Sbjct: 354 --RVGE-GN-ALTGPIAKFLTEENVKVLTERLGLEPGHAVFFGAGDFDEVSKIMGPVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G    N F F WI+DFP YE +EE  KIDF+HNPF+MPQGG+E+L+  D L I  
Sbjct: 410 AAKRAGQFEENVFRFAWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLEALETQDPLDILG 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH   +M +AF   G S+E VE  F G+ RAFQ G PPHGGI
Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPAIMFKAFEIAGYSRETVETEFAGMLRAFQFGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDEARLRELNIQL 581


>gi|254390363|ref|ZP_05005580.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294813842|ref|ZP_06772485.1| Aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326442260|ref|ZP_08216994.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197704067|gb|EDY49879.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294326441|gb|EFG08084.1| Aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 593

 Score =  602 bits (1553), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 294/596 (49%), Positives = 400/596 (67%), Gaps = 12/596 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDV + VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +A  E
Sbjct: 1   MHRYRSHTCGELRASDVSTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAANE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E V+ +DG V+ R A+ +N  + TG+IE+    IE+L  A+++P  +  +   
Sbjct: 61  ALSHLTKETVVRVDGTVVGRGADNVNPELPTGEIEIEVTGIEVLGAAQQIPFTINADDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+++R +M A  F E +TPIL A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILAATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF  G  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPVEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRARLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           ++T+ F  S F+ F+       G  V A+P        R F D++ E+A  QG  GLA++
Sbjct: 301 DITDVFEGSAFKAFA-------GKHVRALPVPDVSAQPRKFFDQLGEYAVEQGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G ++  GP+AK L   N + +  RL +  G + FF AG+  +        R  
Sbjct: 354 --RVAEDGTLS--GPIAKFLTEENVKVLTERLGLAAGHAVFFGAGEAAEVSKIMGAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G      F FCWI+DFP YE +EE  KIDF+HNPF+MPQGGM+ L+  D L I A
Sbjct: 410 AAKRSGHFEEGVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMKDLEEKDPLDILA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+ML+AF   G  +E VE  F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPEIMLKAFEIAGYERETVEREFAGMLRAFRLGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+PS +   +LREL + + + P
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPSVLEESRLRELNIALRKPP 585


>gi|302559582|ref|ZP_07311924.1| aspartyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302477200|gb|EFL40293.1| aspartyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 587

 Score =  602 bits (1552), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 298/592 (50%), Positives = 404/592 (68%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTEAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E V+ +DG V+SR  E +NA + TG++E+    +E+L  A  LP  +  E   
Sbjct: 61  ALDKLSKETVVRVDGKVVSRGTENVNAELPTGEVEVEVSVVEVLGEAAPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I++MR +M A  F E +TPIL+A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNILLRTSVISAMRHKMTAMGFNEMATPILSATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF NG  V++ F R+ + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRVPFREAMLKYGSDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           ++T+ F  SEF+ F+       G  V A+P     G  R F D++ ++A SQG  GLA++
Sbjct: 301 DITDVFEGSEFKAFA-------GKHVRALPVPDVSGQPRKFFDQLGDYAVSQGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G+++  GP+AK L   N   +  RL +  G + FF AG+  +        R  
Sbjct: 354 --RVAEDGSLS--GPIAKFLTEANVAELTKRLSLAPGHAVFFGAGEFDEVSKIMGAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G    N F FCWI+DFP YE +EE   IDF+HNPF+MPQGG+E+L+  D L I  
Sbjct: 410 AAKRAGHFEENVFRFCWIVDFPMYEKDEETGAIDFSHNPFSMPQGGLEALETQDPLDILG 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+ML+AF   G  +E VE +F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPEIMLKAFEIAGYERETVEEKFAGMLRAFRFGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL L +
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELEEARLRELHLTV 581


>gi|333025634|ref|ZP_08453698.1| putative aspartyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332745486|gb|EGJ75927.1| putative aspartyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 587

 Score =  600 bits (1546), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 298/592 (50%), Positives = 407/592 (68%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +A FE
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAAFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E VL +DG V+SR AE +N ++ TG +E+ A ++E+L  A  LP  +  E   
Sbjct: 61  TLDKLSKETVLRVDGKVVSRGAENVNPDLPTGAVEVEAGEVEVLGEAGPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I ++R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVIAAVRQKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGRFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +F EF  G  V++ F RI + +++ +YG DKPDLR  + +H
Sbjct: 241 MSFVEQEDVFQPVEKLMTELFTEFGGGREVTSPFPRIPFRESMLKYGNDKPDLRAQLELH 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F  SEF+ F+       G  V A+P       +R F D++ E+A  QG  GLA++
Sbjct: 301 DISDVFASSEFKAFA-------GKHVRALPVPDTAKQSRKFFDQLGEYAVEQGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G +A  GP+AK L   + +A+  RL +  G + FF AG+  +     +  R  
Sbjct: 354 --RVGEDGQLA--GPIAKFLTADDVKALTERLSLAPGHAVFFGAGEFDEVSKIMSAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G      F FCW++DFP +E +EE  KIDF+HNPF+MPQGGM++L+  D L I A
Sbjct: 410 AAKRAGHFEEGVFRFCWVVDFPMFEKDEETGKIDFSHNPFSMPQGGMDALEHKDPLDILA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH   +ML+AF   G  +E VE+ F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPAIMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A GIDRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++
Sbjct: 530 APGIDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELNIQL 581


>gi|239980703|ref|ZP_04703227.1| aspartyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291452562|ref|ZP_06591952.1| aspartyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291355511|gb|EFE82413.1| aspartyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 594

 Score =  599 bits (1544), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 293/592 (49%), Positives = 399/592 (67%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVGS VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +   E
Sbjct: 1   MHRYRSHTCGELRASDVGSDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAAE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +   +  E V+ +DG V+SR  E +N  + TG+IE+    +E+L  A  LP  +  E   
Sbjct: 61  LLDKLSKETVVRVDGQVVSRGTENVNPELPTGEIEIEVSDVEVLGEAAPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+++R +M A  F E +TPIL A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILAATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +F EF  G  V++ F RI + +++ +YG DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFRPIEKLMTELFTEFGGGREVTSPFPRIPFRESMLKYGNDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           ++T+ F  S F+ F+       G  V A+P     G +R F D + ++A  QG  GLA++
Sbjct: 301 DITDVFADSGFKAFA-------GKHVRALPVPDTAGQSRKFFDGLGDYAVEQGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ + G ++  GP+AK L   +   +  RL ++ G + FF AG+  +     +  R  
Sbjct: 354 --RVGDDGALS--GPIAKFLTEDDVAVLTERLGLKPGHAVFFGAGEFDEVSKIMSAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G    N F FCWI+DFP YE +EE  KI+F+HNPF+MPQGGM+ L+  D L I A
Sbjct: 410 AAKRSGHFEENVFRFCWIVDFPMYEKDEETGKIEFSHNPFSMPQGGMQDLEEKDPLDILA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  EVML+AF   G  +E VE  F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPEVMLKAFEIAGYERETVEREFAGMLRAFRLGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELEESRLRELNIQL 581


>gi|295837689|ref|ZP_06824622.1| aspartate-tRNA ligase [Streptomyces sp. SPB74]
 gi|197695940|gb|EDY42873.1| aspartate-tRNA ligase [Streptomyces sp. SPB74]
          Length = 587

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 297/592 (50%), Positives = 406/592 (68%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +A FE
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAAFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E VL +DG V+SR AE +N ++ TG +E+ A ++E+L  A  LP  +  E   
Sbjct: 61  TLDKLSKETVLRVDGSVVSRGAENVNPDLPTGAVEVEAGEVEVLGEAGPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I ++R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVIAAVRQKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGRFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +F EF  G  V++ F RI + +++ +YG DKPDLR  + +H
Sbjct: 241 MSFVEQEDVFQPVEKLMTELFTEFGGGREVTSPFPRIPFRESMLKYGNDKPDLRARLELH 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F  SEF+ F+       G  V A+P       +R F D++ E+A  QG  GLA++
Sbjct: 301 DISDVFAGSEFKAFA-------GKHVRALPVPDTAKQSRKFFDQLGEYAVEQGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G +A  GP+AK L   + +A+  RL +  G + FF AG+  +     +  R  
Sbjct: 354 --RVGEDGQLA--GPIAKFLTADDVKALTERLSLAPGHAVFFGAGEYDEVSKIMSAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G      F FCW++DFP +E +EE  K DF+HNPF+MPQGGM++L+  D L I A
Sbjct: 410 AAKRSGHFEEGVFRFCWVVDFPMFEKDEETGKTDFSHNPFSMPQGGMDALEHKDPLDILA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH   +ML+AF   G  +E VE+ F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPAIMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A GIDRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++
Sbjct: 530 APGIDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELNIQL 581


>gi|21222206|ref|NP_627985.1| aspartyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|24212421|sp|Q9F323|SYD_STRCO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|10178901|emb|CAC08476.1| aspartyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
          Length = 587

 Score =  596 bits (1537), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 300/592 (50%), Positives = 406/592 (68%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRSSDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTEAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E  + +DG V+SR A+ IN ++ TG++E+   ++E+L  A+ LP  +  E   
Sbjct: 61  ALDKLTKESTVRVDGKVVSRGADNINPDLPTGEVEVEVGEVELLGAAQPLPFTINTEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTSVISSIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLHAGRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF NG  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFRPIEQLMTELFEEFGNGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           ++T+ F  SEF+ F+       G  V A+P     G  R F D++ ++A SQG  GLA++
Sbjct: 301 DITDVFEGSEFKAFA-------GKHVRALPVPDVSGQPRRFFDQLGDYAVSQGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G ++  GP+AK L   N   +  RL +  G + FF AG+  +        R  
Sbjct: 354 --RVGEDGKLS--GPIAKFLTEENVAELTKRLSLAPGHAVFFGAGEFDEVSKIMGAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G    N F FCWI+DFP YE +EE  KIDF+HNPF+MPQGGM++L+  D L I A
Sbjct: 410 AAKRAGHFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMDALENQDPLDILA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+ML+AF   G   E VE  F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPEIMLKAFEIAGYDAETVEREFAGMLRAFRFGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL L +
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDESRLRELHLTV 581


>gi|329935902|ref|ZP_08285704.1| aspartyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329304593|gb|EGG48469.1| aspartyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 587

 Score =  596 bits (1537), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 300/592 (50%), Positives = 402/592 (67%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVGS VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRASDVGSDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E  + +DG V+SR AE +NA++ TG+IE+   ++E+L  A  LP  +  E   
Sbjct: 61  ALDKLSKESTVRVDGKVVSRGAENVNADLPTGEIEVEVGEVELLGAAAPLPFTINTEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+++R +M A NF E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMAAMNFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF  G  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTDLFEEFGGGRPVTSPFPRIPFREAMAKYGSDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           ++T+ F  SEF+ F+       G  V A+P        R F D++ E+A  QG  GLA++
Sbjct: 301 DLTDIFAGSEFKAFA-------GKHVRALPVPDVAAQPRKFFDQLGEYAVEQGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G++   GP+AK L   N   +  RL +  G + FF AG+  +        R  
Sbjct: 354 --RVAEDGSLT--GPIAKFLTEENVAELTKRLSLAAGHAVFFGAGEYDEVSKIMGAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G    N F FCWI+DFP YE +EE  KIDF+HNPF+MPQGGM++L+  D L I A
Sbjct: 410 AAKRAGHFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMDALENQDPLDILA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  ++ML+AF   G   E VE  F G+ RA + G PPHGGI
Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPDIMLKAFEIAGYEHETVEREFAGMLRALRFGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL L +
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELEETRLRELHLTV 581


>gi|297158885|gb|ADI08597.1| aspartyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 616

 Score =  596 bits (1537), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 293/592 (49%), Positives = 399/592 (67%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  +DV + VRLSGW+H  R  GGI+F+D+RDHYG+ Q+V  PD+   +
Sbjct: 1   MHRYRSHTCGELRAADVDTDVRLSGWLHNRRNLGGILFIDLRDHYGLVQLVVRPDTPAND 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              S+  E V+ +DG V++R AE +N ++ TG+IE+    +E+L  A+ LP  VF E   
Sbjct: 61  ALSSISKETVVRVDGRVIARGAENVNPDLPTGEIEVEVTDVEVLGGADPLPFTVFPEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I+++R +M A+ F E +TPIL+A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVISAIRQKMTAQGFNELATPILSATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLHAGKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E V+  +FEEF  G  V++ F R+ + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQVIEKVMTELFEEFGGGRHVTSPFPRVPFREAMLKYGSDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           +V+  F  S F+ F+       G  V A+         R F D+M E+A  QG  GLA++
Sbjct: 301 DVSHVFADSGFKAFA-------GKHVRALAVPDTADQPRKFFDQMGEFAVEQGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E   +   GP+AK L   + E +   ++ + G + FF AG+  +        R  
Sbjct: 354 --RIGEDAKLT--GPIAKFLTDEDVEKLIAEVEGKPGTAIFFGAGEFDEVSKIMGAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G    N F FCWI+DFP +E NE+  +I+F+HNPF+MPQGG+E+L+  D L I A
Sbjct: 410 AARRAGHFEENVFRFCWIVDFPMFERNEDTGQIEFSHNPFSMPQGGLEALRTKDPLDILA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  +VM QAF   G S+E VE  FGG+ RAF  G PPHGGI
Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPDVMYQAFEIAGYSREEVEREFGGMLRAFHFGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DLLMG+PS V   +LREL L I
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLLMGAPSEVDEARLRELHLSI 581


>gi|256786704|ref|ZP_05525135.1| aspartyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289770599|ref|ZP_06529977.1| aspartyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289700798|gb|EFD68227.1| aspartyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 587

 Score =  596 bits (1537), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 300/592 (50%), Positives = 406/592 (68%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRSSDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTEAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E  + +DG V+SR A+ IN ++ TG++E+   ++E+L  A+ LP  +  E   
Sbjct: 61  ALDKLTKESTVRVDGKVVSRGADNINPDLPTGEVEVEVGEVELLGAAQPLPFTINTEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTSVISSIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLHAGRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF NG  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFRPIEQLMTELFEEFGNGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           ++T+ F  SEF+ F+       G  V A+P     G  R F D++ ++A SQG  GLA++
Sbjct: 301 DITDVFEGSEFKAFA-------GKHVRALPVPDVSGQPRRFFDQLGDYAVSQGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G ++  GP+AK L   N   +  RL +  G + FF AG+  +        R  
Sbjct: 354 --RVGEDGKLS--GPIAKFLTEENVAELTKRLSLAPGHAVFFGAGEFDEVSKIMGAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G    N F FCWI+DFP YE +EE  KIDF+HNPF+MPQGGM++L+  D L I A
Sbjct: 410 AAKRAGHFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMDALENRDPLDILA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+ML+AF   G   E VE  F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPEIMLKAFEIAGYDAETVEREFAGMLRAFRFGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL L +
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDESRLRELHLTV 581


>gi|302520596|ref|ZP_07272938.1| aspartyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|318059207|ref|ZP_07977930.1| aspartyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318079388|ref|ZP_07986720.1| aspartyl-tRNA synthetase [Streptomyces sp. SA3_actF]
 gi|302429491|gb|EFL01307.1| aspartyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 587

 Score =  596 bits (1536), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 296/592 (50%), Positives = 406/592 (68%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +A FE
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAAFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E VL +DG V+SR AE +N ++ TG +E+ A ++E+L  A  LP  +  E   
Sbjct: 61  TLDKLSKETVLRVDGKVVSRGAENVNPDLPTGAVEVEAGEVEVLGEAGPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I ++R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVIAAVRQKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGRFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +F EF  G  V++ F RI + +++ +YG DKPDLR  + +H
Sbjct: 241 MSFVEQEDVFQPVEKLMTELFTEFGGGREVTSPFPRIPFRESMLKYGNDKPDLRAQLELH 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F  S+F+ F+       G  V A+P       +R F D++ E+A  QG  GLA++
Sbjct: 301 DISDVFASSDFKAFA-------GKHVRALPVPDTAKQSRKFFDQLGEYAVEQGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G +A  GP+AK L   + +A+  RL +  G + FF AG+  +     +  R  
Sbjct: 354 --RVGEDGQLA--GPIAKFLTADDVKALTERLALAPGYAVFFGAGEFDEVSKIMSAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G      F FCW++DFP +E +EE  K DF+HNPF+MPQGGM++L+  D L I A
Sbjct: 410 AAKRAGHFEEGVFRFCWVVDFPMFEKDEETGKTDFSHNPFSMPQGGMDALEHKDPLDILA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH   +ML+AF   G  +E VE+ F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPAIMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A GIDRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++
Sbjct: 530 APGIDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELNIQL 581


>gi|307329472|ref|ZP_07608633.1| aspartyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306884881|gb|EFN15906.1| aspartyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 620

 Score =  595 bits (1535), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 292/596 (48%), Positives = 400/596 (67%), Gaps = 10/596 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  +DV + VRLSGW+H  R  GGI+F+D+RDHYG+ Q+V  PD+A  E
Sbjct: 1   MHRYRSHTCGQLRAADVDTDVRLSGWLHNRRNLGGILFIDLRDHYGLVQLVVRPDTAANE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              S+  E V+ IDG V++R A+ +N  + TG+IE+    +E+L  A+ LP  VF E   
Sbjct: 61  ALSSISKETVVRIDGRVIARGADNVNPELPTGEIEVEVADVEVLGAADPLPFTVFPEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I+++R +M A+ F E +TPIL+A+SPEGARDF
Sbjct: 121 GEERRLEYRFLDLRRERMHRNIMLRSAVISAIRQKMTAQGFNELATPILSATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLHAGKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E V+  +FEEF  G  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFGVIEKVMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELR 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+  F  S F+ F+     +      A+P       R F D++ E+A  QG  GLA++ 
Sbjct: 301 DVSHIFEGSGFKAFA-----DKHVRALAVP-DTADQPRKFFDQLGEFASLQGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E   +   GP+AK LN  + E +   +  + G S FF AG+  +        R   
Sbjct: 354 -RIGEDAKLT--GPIAKFLNHEDVEKLITEVQGKPGTSIFFGAGEFDEVSKIMGAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G      F FCWI+DFP +E NE+  +I+F+HNPF+MPQGG+E+L+  D L I A+
Sbjct: 411 AKRTGHFEEGVFRFCWIVDFPMFERNEDTGQIEFSHNPFSMPQGGLEALETKDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  +VM +AF+  G  ++ VE  FGG+ RAF  G PPHGGIA
Sbjct: 471 QYDIVCNGVELSSGAIRNHEPDVMYKAFALAGYDRDEVEREFGGMLRAFHFGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DRIVMLL    N+RE   FP++ N  DLLMG+PS V   +LREL L + + P+
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLLMGAPSEVDEARLRELHLSVRKPPQ 586


>gi|97197015|sp|Q5GTS0|SYD_WOLTR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 600

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 297/607 (48%), Positives = 410/607 (67%), Gaps = 21/607 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+ Y+TH+C +L  +DV   V LSGW++R R HG +IF+D+RD YGITQ+V N D   F 
Sbjct: 1   MNYYKTHTCNELRKNDVEKEVTLSGWMYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFC 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE------------ 108
               ++ E V+ + G+V +R+ +TIN +I TG+IE++   ++I S  E            
Sbjct: 61  KISDLKPESVITVTGIVKARTEDTINISISTGEIEVTVNNLQIESEVEFHHNEETAKEER 120

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
            +   +  ++EYPE++RFKYRFLDLRR+ +  NIV R++II  +R  MI + F+E  TPI
Sbjct: 121 SILASIADDQEYPENMRFKYRFLDLRREKVRNNIVLRSQIIAELRKFMIEQGFLEIQTPI 180

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D
Sbjct: 181 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMISGFDKYFQIAPCFRDEDARAD 240

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           R PGEFYQLD+EMSFV Q+D+   +E+ L  VF +FS   +V   F RI Y +A+ +YG+
Sbjct: 241 RSPGEFYQLDLEMSFVTQEDVFQVIESTLYKVFAKFSR-KSVDKGFSRITYKEAMLKYGS 299

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
           DKPDLRNP+++ +VTE F  SEF +F    ++  G  V AIPA K     R+F D+  E 
Sbjct: 300 DKPDLRNPLLISDVTEIFRDSEFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEH 357

Query: 348 ARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406
            + + G  GL YI +  D +      GP+AK L+      IR   +++ GDS FF +   
Sbjct: 358 TQKEFGAKGLGYITFNKDGTAK----GPIAKFLDDNRLNHIREATNIKPGDSVFFASDKE 413

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
            +  + A   R  +  ELG+I+ N F+FCW++DFP++ ++++ KKIDF HNPF+MP GG+
Sbjct: 414 NEAATIAGKVRTLLGSELGLIDNNIFKFCWVVDFPYFVYDDKSKKIDFFHNPFSMPHGGL 473

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
           + L+  + L I A+QYDLVCNG E++SG IRN+  ++M +AF+  G +KE V  +FG L 
Sbjct: 474 KDLEEKNPLDILAYQYDLVCNGIELSSGAIRNNKLDIMYKAFATAGYNKEEVNKKFGALV 533

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           RAF+ G+PPHGGIA GIDRIVMLL  A N+RE++ FPM+Q   D+LM +PS V  + LRE
Sbjct: 534 RAFRFGVPPHGGIAPGIDRIVMLLADAPNIREITCFPMNQQGEDVLMDAPSKVDNKHLRE 593

Query: 587 LGLRIVE 593
           L L++VE
Sbjct: 594 LSLKVVE 600


>gi|58584273|ref|YP_197846.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58418589|gb|AAW70604.1| Aspartyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 608

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 297/607 (48%), Positives = 410/607 (67%), Gaps = 21/607 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+ Y+TH+C +L  +DV   V LSGW++R R HG +IF+D+RD YGITQ+V N D   F 
Sbjct: 9   MNYYKTHTCNELRKNDVEKEVTLSGWMYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFC 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE------------ 108
               ++ E V+ + G+V +R+ +TIN +I TG+IE++   ++I S  E            
Sbjct: 69  KISDLKPESVITVTGIVKARTEDTINISISTGEIEVTVNNLQIESEVEFHHNEETAKEER 128

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
            +   +  ++EYPE++RFKYRFLDLRR+ +  NIV R++II  +R  MI + F+E  TPI
Sbjct: 129 SILASIADDQEYPENMRFKYRFLDLRREKVRNNIVLRSQIIAELRKFMIEQGFLEIQTPI 188

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D
Sbjct: 189 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMISGFDKYFQIAPCFRDEDARAD 248

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           R PGEFYQLD+EMSFV Q+D+   +E+ L  VF +FS   +V   F RI Y +A+ +YG+
Sbjct: 249 RSPGEFYQLDLEMSFVTQEDVFQVIESTLYKVFAKFSR-KSVDKGFSRITYKEAMLKYGS 307

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
           DKPDLRNP+++ +VTE F  SEF +F    ++  G  V AIPA K     R+F D+  E 
Sbjct: 308 DKPDLRNPLLISDVTEIFRDSEFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEH 365

Query: 348 ARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406
            + + G  GL YI +  D +      GP+AK L+      IR   +++ GDS FF +   
Sbjct: 366 TQKEFGAKGLGYITFNKDGTAK----GPIAKFLDDNRLNHIREATNIKPGDSVFFASDKE 421

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
            +  + A   R  +  ELG+I+ N F+FCW++DFP++ ++++ KKIDF HNPF+MP GG+
Sbjct: 422 NEAATIAGKVRTLLGSELGLIDNNIFKFCWVVDFPYFVYDDKSKKIDFFHNPFSMPHGGL 481

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
           + L+  + L I A+QYDLVCNG E++SG IRN+  ++M +AF+  G +KE V  +FG L 
Sbjct: 482 KDLEEKNPLDILAYQYDLVCNGIELSSGAIRNNKLDIMYKAFATAGYNKEEVNKKFGALV 541

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           RAF+ G+PPHGGIA GIDRIVMLL  A N+RE++ FPM+Q   D+LM +PS V  + LRE
Sbjct: 542 RAFRFGVPPHGGIAPGIDRIVMLLADAPNIREITCFPMNQQGEDVLMDAPSKVDNKHLRE 601

Query: 587 LGLRIVE 593
           L L++VE
Sbjct: 602 LSLKVVE 608


>gi|190570818|ref|YP_001975176.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|238064674|sp|B3CPJ5|SYD_WOLPP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|190357090|emb|CAQ54495.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 600

 Score =  593 bits (1530), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 298/607 (49%), Positives = 416/607 (68%), Gaps = 21/607 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+ Y+TH C +L  +DV   V LSGW++R R HG +IF+D+RD +GITQ+V N D   F+
Sbjct: 1   MNCYKTHECNELRKNDVEKEVTLSGWLYRKRDHGNLIFVDLRDFHGITQLVFNNDKDFFD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE------------ 108
              +++SE V+ + G+V +R+ +T+N++I TG+IE+    +++ S  E            
Sbjct: 61  EISNLKSESVITVTGIVKARTEDTVNSSISTGEIEVIVSNLQVESEVEFHCDEEIAKEER 120

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
            +   + GE+EYPE++RFKYRFLDLRR+ +  NI+ R++II+ +R  MI + F++  TPI
Sbjct: 121 SILASIAGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIISELRRLMIEQGFLDIQTPI 180

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D
Sbjct: 181 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARAD 240

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           R PGEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F RI Y +A+ +YG+
Sbjct: 241 RSPGEFYQLDLEMSFVTQEDIFQVIESTLYKVFAKFSR-KSVDKDFPRITYKEAMLKYGS 299

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
           DKPDLRNP+++ +VTE F  SEF +F    ++  G  V AIPA K     R+F D+  E 
Sbjct: 300 DKPDLRNPLLISDVTEIFRDSEFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEH 357

Query: 348 ARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406
           A+ + G  GL YI +  D+ G     GP+AK L+     +I+   +++ GDS FF +   
Sbjct: 358 AQKEFGAKGLGYITF--DKDG--IAKGPIAKFLDDNRLNSIKEITNVKPGDSVFFASDKE 413

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
            +  + A   R  +  ELG+I+ + F+FCWI+DFP++ ++++ KKIDF HNPF+MP GG+
Sbjct: 414 NEAATIAGKVRTLLGSELGLIDDDIFKFCWIIDFPYFVYDDKSKKIDFFHNPFSMPHGGL 473

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
           + L+  D L I A+QYDLVCNG E++SG IRN+   +M +AF+  G SKE V+ +FG L 
Sbjct: 474 KDLEEKDPLDILAYQYDLVCNGIELSSGAIRNNKLNIMYRAFAIAGYSKEEVDTKFGALV 533

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           RAF+ G PPHGGIA G+DR+VMLL    N+REV  FPM+Q   D+LMG+PS V  + LRE
Sbjct: 534 RAFRFGAPPHGGIAPGVDRMVMLLADEPNIREVICFPMNQQGEDVLMGAPSKVDDKHLRE 593

Query: 587 LGLRIVE 593
           L L++VE
Sbjct: 594 LSLKVVE 600


>gi|21674146|ref|NP_662211.1| aspartyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|27923861|sp|Q8KCT7|SYD_CHLTE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|21647306|gb|AAM72553.1| aspartyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 603

 Score =  593 bits (1529), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 298/592 (50%), Positives = 405/592 (68%), Gaps = 10/592 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FE 60
           +R+RTH CG L     G  VR++GWVHR+R HGG+IF+D+RDH GI Q+V  P++   F+
Sbjct: 13  NRFRTHYCGRLNRKSEGELVRIAGWVHRIRDHGGLIFIDLRDHTGICQLVVLPENESQFK 72

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+++ SE V+  +G V+ RS ET+N  + +G IE+    I+I S A+ LP PV  +   
Sbjct: 73  LAETLHSESVISAEGKVVLRSDETVNPRLASGAIEVVVSSIQIESNADPLPFPVADDMPT 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR+ LH+NI+ R+++  ++R  +   +FIE  TPILT+SSPEGARDF
Sbjct: 133 SEELRLKYRFLDLRREKLHENIIFRSKLTAAVRKYLTDLDFIEIQTPILTSSSPEGARDF 192

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GF RYFQIAPCFRDED R+DR PGEFYQ+D+E
Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFPRYFQIAPCFRDEDARADRSPGEFYQIDIE 252

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+EQDD+   +E + + + E  S+       F RI Y D + RYG+DKPDLR P+ + 
Sbjct: 253 MSFIEQDDLFVILEGMFKHLVENMSHKRITQFPFPRISYKDVMNRYGSDKPDLRIPLEIQ 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +VTE FV+S F+VF+   +   G  V A+  KG G  +R F D+  + AR  G  GLAYI
Sbjct: 313 DVTELFVNSGFKVFAS--NTAEGSCVKAMVLKGMGNESRLFYDKAEKRARELGSAGLAYI 370

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            ++  E G     GPV K L+     A++ RL +  GD  FF AG   K C      RN+
Sbjct: 371 QFK--EEGP---KGPVVKFLSEAEMNALKERLGIVTGDVVFFGAGKWEKTCKIMGGMRNY 425

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A +L  ++ +   FCWI+DFP +E+NEE+KKIDF+HNPF+MPQG ME+L+    L I A
Sbjct: 426 FA-DLFPLDKDELSFCWIVDFPMFEYNEEDKKIDFSHNPFSMPQGEMEALESKFPLDILA 484

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  ++M +AF   G SKE V+ RFG +  AF+ G PPHGGI
Sbjct: 485 YQYDIVCNGIELSSGAIRNHRPDIMYKAFEIAGYSKEEVDARFGHMIEAFKHGAPPHGGI 544

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VM+L   +N+REV  FPM+Q+  DL+M +PS V+ +QL+EL +RI
Sbjct: 545 APGLDRLVMILRDEQNIREVIAFPMNQSAQDLMMAAPSEVTAQQLKELCIRI 596


>gi|239930096|ref|ZP_04687049.1| aspartyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291438434|ref|ZP_06577824.1| aspartyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291341329|gb|EFE68285.1| aspartyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 587

 Score =  593 bits (1528), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 295/592 (49%), Positives = 403/592 (68%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTEAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E V+ +DG V+SR  E +N  + TG++E+    +E+L  A  LP  +  E   
Sbjct: 61  ALDKLSKETVVRVDGKVVSRGEENVNPELPTGEVEVEVGVVEVLGEAAPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT++I+++R +M A  F E +TPIL+A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTQVISAIRQKMTALGFNEMATPILSATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF NG  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFREAMLKYGSDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           ++T+ F  SEF+ F+       G  V A+P     G  R F D++ ++A +QG  GLA++
Sbjct: 301 DITDLFEGSEFKAFA-------GKHVRALPVPDVSGQPRKFFDQLGDFAVTQGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G++   GP+AK L   N   +  RL +  G + FF AG+  +        R  
Sbjct: 354 --RVGEDGSLT--GPIAKFLTEENVAELTKRLSLAPGHAVFFGAGEFDEVSKIMGAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G    N F FCWI+DFP YE +EE   IDF+HNPF+MPQGG+E+L+  D L I  
Sbjct: 410 AAKRAGQFEENVFRFCWIVDFPMYEKDEETGAIDFSHNPFSMPQGGLEALETQDPLDILG 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+ML+AF   G  +E VE +F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPEIMLKAFEIAGYDRETVEEKFAGMLRAFRFGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +L+EL L +
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELEESRLKELHLSV 581


>gi|29830938|ref|NP_825572.1| aspartyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|46577226|sp|Q82F68|SYD_STRAW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|29608051|dbj|BAC72107.1| putative aspartyl-tRNA synthetase [Streptomyces avermitilis
           MA-4680]
          Length = 587

 Score =  592 bits (1527), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 295/592 (49%), Positives = 401/592 (67%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVGS VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRASDVGSDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               V  E  + +DG V+SR  E +N ++ TG+IE+   ++E+L  A  LP  +  E   
Sbjct: 61  ALDKVSKESTVRVDGKVVSRGTENVNPDLPTGEIEVEVSEVELLGAAAPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+++R +M A  F E +TPIL+A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNILLRTAVISAIRHKMTALGFNEMATPILSATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLHPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF  G  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++T+ F  SEF+ F+       G  V A+P     G  R F D + ++A  QG  GLA++
Sbjct: 301 DITDIFEGSEFKAFA-------GKHVRALPVPDVSGQTRKFFDGLGDYAVEQGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G++   GP+AK L   N   +  RL +  G + FF AG+  +        R  
Sbjct: 354 --RVGEDGSLT--GPIAKFLTEENVAELTKRLSLAPGHAVFFGAGEFDEVSKIMGAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G    N F FCWI+DFP YE +E+  KIDF+HNPF+MPQGG+E+L+  D L I  
Sbjct: 410 AAKRSGNFEENVFRFCWIVDFPMYEKDEDTGKIDFSHNPFSMPQGGLEALETQDPLDILG 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+ML+AF   G  ++ VE +F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPEIMLKAFEIAGYDRDTVEEQFAGMLRAFRFGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL L +
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELHLSV 581


>gi|302543884|ref|ZP_07296226.1| aspartate-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302461502|gb|EFL24595.1| aspartate-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 605

 Score =  592 bits (1526), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 291/591 (49%), Positives = 398/591 (67%), Gaps = 10/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  +DV + VRLSGW+H  R  GGI+F+D+RDHYG+ Q+V  PD+A  E
Sbjct: 1   MHRYRSHNCGQLRAADVDTDVRLSGWLHNRRNLGGILFIDLRDHYGLVQLVVRPDTAANE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              S+  E V+ +DG V++R A+ +N  + TG+IE+    +E+L  A+ LP  V+ E   
Sbjct: 61  KLSSISKESVVRVDGRVIARGADNVNPELPTGEIEVEVADVEVLGAADPLPFTVYPEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R ++RFLDLRR+ +H+NI+ R+ +I+++R +M A+ F E +TPIL+A+SPEGARDF
Sbjct: 121 GEERRLEHRFLDLRRERMHRNIMLRSAVISAIRQKMTAQGFNEMATPILSATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLHAGKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E V+  +FEEF NG  V++ F RI +  A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFEVIEKVMTELFEEFGNGRHVTSPFPRIPFRQAMLKYGSDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+  F  S F+ F+     +      A+P       R F D+M E+A  QG  GLA++ 
Sbjct: 301 DVSHVFAGSGFKAFA-----DKHVRALAVP-DTAEQPRKFFDQMGEFAVEQGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E   +   GP+AK L   + E +   ++ + G S FF AGD  +        R   
Sbjct: 354 -RIGEDSKLT--GPIAKFLTDEDVEKLIAEVEGKPGTSIFFGAGDFDEVSKIMGAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G    N F FCWI+DFP +E NE+  +I+F+HNPF+MPQGG+++L+  D L I A+
Sbjct: 411 AKRTGHFEENVFRFCWIVDFPMFERNEDTGEIEFSHNPFSMPQGGLDALENQDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  +VM +AF   G S++ VE  FGG+ RAF  G PPHGGIA
Sbjct: 471 QYDIVCNGTELSSGAIRNHEPDVMFKAFGIAGYSRDEVEREFGGMLRAFHFGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DRIVMLL    N+RE   FP++ N  DLLMG+PS V   +LREL L +
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLLMGAPSEVDEARLRELHLSV 581


>gi|297193199|ref|ZP_06910597.1| aspartyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197720469|gb|EDY64377.1| aspartyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 590

 Score =  592 bits (1526), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 298/592 (50%), Positives = 403/592 (68%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +   E
Sbjct: 1   MHRYRSHTCGELRASDVGADVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTKAAE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +   +  E V+ +DG V+SR AE +N ++ TG+IE+ A ++EIL  A++LP  V  +   
Sbjct: 61  VLDKLTKETVVRVDGKVVSRGAENVNPDLPTGEIEVEAAEVEILGAAKQLPFTVNTDDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+++R +M A  F E +TPIL A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILAATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF  G  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           ++++ F  SEF+ F+       G  V A+         R F D + ++A  QG  GLA++
Sbjct: 301 DISDVFAGSEFKAFA-------GKHVRALAVPDTADQPRKFFDGLGDYAVEQGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+   G +   GP+AK L   N + +  RL +  G + FF AGD  +        R  
Sbjct: 354 --RVGNDGALT--GPIAKFLTEENVKVLTERLGLAAGHAVFFGAGDFDEVSKIMGAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G    N F FCWI+DFP YE +EE  KIDF+HNPF+MPQGG+E+L+  D L I  
Sbjct: 410 AAKRAGHFEENVFRFCWIVDFPMYERDEETGKIDFSHNPFSMPQGGLEALETKDPLDILG 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+M +AF   G S+E VE+ F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPEIMFKAFEIAGYSRETVEHEFAGMLRAFEYGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A GIDRIVMLL    N+RE   FP++ N  DLLMG+P+ +   +LREL +++
Sbjct: 530 APGIDRIVMLLADEPNIRETIAFPLNGNAQDLLMGAPTELDEARLRELNIQL 581


>gi|302535469|ref|ZP_07287811.1| aspartyl-tRNA synthetase [Streptomyces sp. C]
 gi|302444364|gb|EFL16180.1| aspartyl-tRNA synthetase [Streptomyces sp. C]
          Length = 610

 Score =  589 bits (1519), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 296/592 (50%), Positives = 399/592 (67%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +A  +
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAAAD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +   +  E V+ +DG V+SR  E +N ++ TG+IE+ A ++E+L  A  LP  +  +   
Sbjct: 61  VLDKLSKETVVRVDGKVVSRGTENVNPDLPTGEIEIEAAEVEVLGAAAPLPFTINTDDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +F EF  G  V++ F RI + +++ +YG DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFTEFGGGRPVTSPFPRIPFRESMLKYGNDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           ++T+ F  SEF+ F+       G  V A+         R F D + E+A S G  GLA++
Sbjct: 301 DITDVFEGSEFKAFA-------GKHVRALAVPDTAAQPRKFFDGLGEYAISLGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G++   GP+AK L   N + +  RL +  G + FF AG+  +        R  
Sbjct: 354 --RVGEDGSLT--GPIAKFLTEENVKVLTERLGLAAGHAVFFGAGEFDEVSKIMGPVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G    N F FCWI+DFP YE +EE  KIDF+HNPF+MPQGGM+ L+  D L I A
Sbjct: 410 AAKRAGQFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMKDLEEKDPLDILA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  EVML+AF   G   E VE  F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPEVMLKAFEIAGYEAETVEREFAGMLRAFRLGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL + +
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTVLEESRLRELNIAL 581


>gi|294630423|ref|ZP_06708983.1| aspartyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292833756|gb|EFF92105.1| aspartyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 587

 Score =  588 bits (1517), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 294/592 (49%), Positives = 402/592 (67%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E V+ +DG V+SR  E +N  + TG+IE+   ++E+L  A  LP  +  E   
Sbjct: 61  ALDKLSKETVVRVDGKVVSRGTENVNTELPTGEIEIEVGEVEVLGAAAPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+++R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLHPGRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF  G  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFRPIEQLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           ++T+ F  SEF+ F+       G  V A+P        R F D++ ++A SQG  GLA++
Sbjct: 301 DITDVFEGSEFKAFA-------GKHVRALPVPAVQDQPRKFFDQLGDYAVSQGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G++   GP+AK L   N   +  RL +  G + FF AG+  +        R  
Sbjct: 354 --RVGEDGSLT--GPIAKFLTEENVAELTKRLSLAAGHAVFFGAGEFDEVSKIMGAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G    + F FCWI+DFP YE +EE  KIDF+HNPF+MPQGG+++L+  D L I A
Sbjct: 410 AAKRAGQFEQDVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLQALETQDPLDILA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  ++ML+AF   G   E VE  F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPDIMLKAFEIAGYDAETVEREFAGMLRAFRFGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +L+EL L +
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELEPARLKELHLTV 581


>gi|225677284|ref|ZP_03788266.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225590676|gb|EEH11921.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 600

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 296/603 (49%), Positives = 410/603 (67%), Gaps = 21/603 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           +TH+C +L  +DV   V LSGW++R R HG +IF+D+RD YGITQ+V N D   F+   +
Sbjct: 5   KTHTCNELRKNDVEKEVTLSGWLYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFDEISN 64

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE------------ELPL 112
           ++ E V+ + G+V +R+ +T+N++I TG+IE+    + + S  E             +  
Sbjct: 65  LKLESVITVTGIVEARTEDTVNSSISTGEIEVIVNNLRVESEVEFHFDEEIAKEERSILA 124

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
            + GE+EYPE++RFKYRFLDLRR+ +  NI+ R++II  +R  MI   F+E  TPILTAS
Sbjct: 125 SITGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIIAELRKLMIERGFLEIQTPILTAS 184

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           SPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+DR PG
Sbjct: 185 SPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARADRSPG 244

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EFYQLD+EMSFV Q+DI + +E+ L  VF +FS   +V  +F RI Y +A+ +YG+DKPD
Sbjct: 245 EFYQLDLEMSFVTQEDIFDVIESALYKVFAKFSR-KSVDKDFPRITYKEAMLKYGSDKPD 303

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQ 351
           LRNP+++ +VTE F  S F +F    ++  G  V AIPA K     R+F D+  E A+ +
Sbjct: 304 LRNPLLISDVTEIFRDSGFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEHAQKE 361

Query: 352 -GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
            G  GL YI +  D+ G     GP+AK L+      IR   +++ GDS FF +    +  
Sbjct: 362 FGAKGLGYITF--DKDG--TAKGPIAKFLDENRLNHIREATNIEPGDSVFFASDKENEAA 417

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           + A   R  +  EL +I+ N F+FCWI+DFP++ ++++ KKIDF HNPF+MP GG++ L+
Sbjct: 418 NIAGKVRTLLGSELSLIDDNIFKFCWIIDFPYFVYDDKSKKIDFFHNPFSMPHGGLKDLE 477

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             + L I A+QYDLVCNG E++SG IRN+  ++M +AF+  G SKE V+ +FG L RAF+
Sbjct: 478 EKNPLDILAYQYDLVCNGIELSSGAIRNNKLDIMYKAFAIAGYSKEEVDTKFGALVRAFR 537

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G+PPHGGIA G+DRIVMLL    N+REV  FPM+Q   D+LMG+PS V  + LREL L+
Sbjct: 538 FGVPPHGGIAPGVDRIVMLLADEPNIREVICFPMNQQGEDVLMGAPSKVEDKHLRELSLK 597

Query: 591 IVE 593
           ++E
Sbjct: 598 VIE 600


>gi|254383384|ref|ZP_04998736.1| aspartyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194342281|gb|EDX23247.1| aspartyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 608

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 296/592 (50%), Positives = 398/592 (67%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +A  E
Sbjct: 1   MHRYRSHTCGELRASDVGADVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAANE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              SV  E V+ IDG V+SR A+ +N  + +G++E+   ++E+L  +  LP  +  +   
Sbjct: 61  ALSSVTKETVVRIDGKVVSRGADNVNPELPSGEVEIEVSEVEVLGASAPLPFTINTDDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +F EF  G  V++ F RI + +++ +YG DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIERLMTELFTEFGAGREVTSPFPRIPFRESMLKYGNDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           ++T+ F  SEF+ F+       G  V A+         R F D + E+A S G  GLA++
Sbjct: 301 DITDVFEGSEFKAFA-------GKHVRALAVPDTAAQPRKFFDGLGEYAISLGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G +   GP+AK L   N + +  RL +  G + FF AG+  +     +  R  
Sbjct: 354 --RVGEDGGLT--GPIAKFLTEENVKVLTERLGLAAGHAVFFGAGEFDEVSKIMSGVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G    N F FCWI+DFP YE +EE  KIDF+HNPF+MPQGGM+ L+  D L I A
Sbjct: 410 AAKRAGQFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMKDLEEKDPLDILA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  EVML+AF   G   E VE  F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPEVMLKAFEIAGYEAETVEREFAGMLRAFRLGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL + +
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTVLEETRLRELNIAL 581


>gi|78187180|ref|YP_375223.1| aspartyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|97196773|sp|Q3B3A1|SYD_PELLD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78167082|gb|ABB24180.1| aspartyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 604

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 292/592 (49%), Positives = 396/592 (66%), Gaps = 10/592 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFE 60
           +R+RT  CG LG+   G  VRL GWVHR+R HGG++F+D+RDH GI Q+V  P+    FE
Sbjct: 13  NRFRTDYCGQLGLDGEGREVRLGGWVHRIRDHGGLVFIDLRDHTGICQLVVQPEREELFE 72

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  + +E V+ I+G V++RS+ETIN  + +G IE+    I + S A  LP PV  E + 
Sbjct: 73  LAGRLHAESVITIEGRVVARSSETINPRLASGSIEVVVSAIGVESHARPLPFPVADEVQT 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRF+DLRR+ +H+NI+ R+RI  ++R  +   +FIE  TPILT+SSPEGARDF
Sbjct: 133 SEELRLKYRFIDLRREKIHENIIFRSRISAAIRRYLEERDFIEIQTPILTSSSPEGARDF 192

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GF RYFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFPRYFQIAPCFRDEDARADRSPGEFYQLDME 252

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQDD+   +E + R + +  S        F RI Y + +  YGTDKPDLR P+ + 
Sbjct: 253 MAFIEQDDLFEILEGMFRHLTDTMSKKRITRFPFPRISYREVMDSYGTDKPDLRIPLKIE 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +VT  F  S F+VF+   +  PG  V A+  KG G  +R F D+  + AR  G  GLAYI
Sbjct: 313 DVTPMFTDSGFKVFAS--NTKPGCAVKALVLKGRGTESRLFYDKAEKRARELGSAGLAYI 370

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +R  E G     GP+ K +     +A++ +L ++ GD  FF AG     C      R +
Sbjct: 371 QFR--EEGP---KGPIVKFMTEPELQAMKDQLTLETGDVVFFAAGKWEAACKIMGGMRTY 425

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
              +L  ++ +   FCWI+DFP +E+NE+ KK+DF+HNPF+MPQG ME+L+  D L + A
Sbjct: 426 FG-DLFTLDPDELSFCWIVDFPMFEYNEDAKKVDFSHNPFSMPQGEMEALETMDPLDVLA 484

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+M +AF   G S+E V+ RFG +  AF+ G PPHGGI
Sbjct: 485 YQYDIVCNGIELSSGAIRNHKPEIMYKAFEIAGYSREEVDLRFGHMIEAFKLGAPPHGGI 544

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VM+L   +N+REV  FPM+Q   DL+M +PS V+  QLREL +R+
Sbjct: 545 APGLDRLVMILRDEQNIREVIAFPMNQQAQDLMMAAPSEVTGAQLRELHIRL 596


>gi|42520288|ref|NP_966203.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|59798566|sp|Q73HX6|SYD_WOLPM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|42410026|gb|AAS14137.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 600

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 297/607 (48%), Positives = 411/607 (67%), Gaps = 21/607 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+ Y+TH+C +L  +DV   V LSGW++R R HG +IF+D+RD YGITQ+V N D   F+
Sbjct: 1   MNCYKTHTCEELRKNDVEKEVTLSGWLYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE------------ 108
              +++ E V+ + G+V +R+ +T+N++I TG+IE+    + + S  E            
Sbjct: 61  EISNLKLESVITVTGIVEARTEDTVNSSISTGEIEVIVNNLRVESEVEFHFDEEIAKEER 120

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
            + + + GE+EYPE++RFKYRFLDLRR+ +  NI+ R++II  +R  MI   F+E  TPI
Sbjct: 121 SILVSITGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIIAELRKLMIERGFLEIQTPI 180

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D
Sbjct: 181 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARAD 240

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           R PGEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F RI Y +A+ +YG+
Sbjct: 241 RSPGEFYQLDLEMSFVTQEDIFQIIESTLYRVFAKFSR-KSVDKDFPRITYKEAMLKYGS 299

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
           DKPDLRNP+++ +VTE F  S F +F    ++  G  V AIPA K     R+F D+  E 
Sbjct: 300 DKPDLRNPLLISDVTEIFRDSGFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEH 357

Query: 348 ARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406
           A+ + G  GL YI +  D+ G     GP+AK L+      IR   +++ GDS FF +   
Sbjct: 358 AQKEFGAKGLGYITF--DKDG--TAKGPIAKFLDENRLNHIREATNIEPGDSVFFASDKE 413

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
            +  + A   R  +  EL +I+ N F FCWI+DFP++ ++++ KKIDF HNPF+MP GG+
Sbjct: 414 NEAANIAGKVRTLLGSELSLIDDNIFRFCWIIDFPYFVYDDKSKKIDFFHNPFSMPHGGL 473

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
           + L+  + L I A+QYDLVCNG E++SG IRN+  ++M +AF+  G S+  V+ RFG L 
Sbjct: 474 KDLEDKNPLDILAYQYDLVCNGIELSSGAIRNNKLDIMYKAFAIAGYSRGEVDTRFGALV 533

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           RAF+ G+PPHGGIA G+DRIVMLL    N+REV  FPM+Q   D+LMG+PS V  + LRE
Sbjct: 534 RAFRFGVPPHGGIAPGVDRIVMLLADEPNIREVICFPMNQQGEDVLMGAPSKVEDKHLRE 593

Query: 587 LGLRIVE 593
           L L+++E
Sbjct: 594 LSLKVIE 600


>gi|58698523|ref|ZP_00373426.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630146|ref|YP_002726937.1| aspartyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|254781763|sp|C0R2K4|SYD_WOLWR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|58534965|gb|EAL59061.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592127|gb|ACN95146.1| aspartyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 600

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 297/607 (48%), Positives = 411/607 (67%), Gaps = 21/607 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+ Y+TH+C +L  +DV   V LSGW++R R HG +IF+D+RD YGITQ+V N D   F+
Sbjct: 1   MNCYKTHTCNELRKNDVEKEVTLSGWLYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE------------ 108
              +++ E V+ + G+V +R+ +T+N++I TG+IE+    + + S  E            
Sbjct: 61  EISNLKLESVITVTGIVEARTEDTVNSSISTGEIEVIVNNLRVESEVEFHFDEEIAKEER 120

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
            +   + GE+EYPE++RFKYRFLDLRR+ +  NI+ R++II  +R  MI   F+E  TPI
Sbjct: 121 SILASITGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIIAELRKLMIERGFLEIQTPI 180

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D
Sbjct: 181 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARAD 240

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           R PGEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F RI Y +A+ +YG+
Sbjct: 241 RSPGEFYQLDLEMSFVTQEDIFQIIESTLYRVFAKFSR-KSVDKDFPRITYKEAMLKYGS 299

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
           DKPDLRNP+++ +VTE F  S F +F    ++  G  V AIPA K     R+F D+  E 
Sbjct: 300 DKPDLRNPLLISDVTEIFRDSGFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEH 357

Query: 348 ARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406
           A+ + G  GL YI +  D+ G     GP+AK L+      IR   +++ GDS FF +   
Sbjct: 358 AQKEFGAKGLGYITF--DKDG--TAKGPIAKFLDENRLNHIREATNIEPGDSVFFASDKE 413

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
            +  + A   R  +  EL +I+ N F+FCWI+DFP++ ++++ KKIDF HNPF+MP GG+
Sbjct: 414 NEAANIAGKVRTLLGSELSLIDDNIFKFCWIIDFPYFVYDDKSKKIDFFHNPFSMPHGGL 473

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
           + L+  + L I A+QYDLVCNG E++SG IRN+  ++M +AF+  G S+  V+ RFG L 
Sbjct: 474 KDLEDKNPLDILAYQYDLVCNGIELSSGAIRNNKLDIMYKAFAIAGYSRGEVDTRFGALV 533

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           RAF+ G+PPHGGIA G+DRIVMLL    N+REV  FPM+Q   D+LMG+PS V  + LRE
Sbjct: 534 RAFRFGVPPHGGIAPGVDRIVMLLADEPNIREVICFPMNQQGEDVLMGAPSKVEDKHLRE 593

Query: 587 LGLRIVE 593
           L L+++E
Sbjct: 594 LSLKVIE 600


>gi|193214425|ref|YP_001995624.1| aspartyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193087902|gb|ACF13177.1| aspartyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 604

 Score =  587 bits (1512), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 294/596 (49%), Positives = 404/596 (67%), Gaps = 11/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIA 62
           YR+H CG L  ++V + V+LSGWVHRVR HGG+IF+D+RD+ G+ Q+V  P+    F +A
Sbjct: 16  YRSHFCGKLTKAEVETSVKLSGWVHRVRDHGGLIFIDLRDYTGVCQLVLQPEREEIFSLA 75

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +  E V+ I G V+ RS ET+N ++ TG+IE+  + + I S AE +P  +  E    E
Sbjct: 76  EHLHVESVITIVGEVIMRSPETVNPSLSTGEIEVVVESLTIESSAEPVPFQIADEGNTSE 135

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLRR+ L +NI+ R+++ + +R  +I   F E  TPILT SSPEGARD+LV
Sbjct: 136 ELRLKYRFLDLRREHLRENILFRSKVTSEIRRFLIDGGFHEIQTPILTVSSPEGARDYLV 195

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQAPQQ+KQLLM +GFD+YFQIAPCFRDED R+DR PGEFYQLDMEMS
Sbjct: 196 PSRLHPGKFYALPQAPQQFKQLLMVAGFDKYFQIAPCFRDEDARADRSPGEFYQLDMEMS 255

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QDD+   +EN+ + + + F+  +     F RI + +++ +YGTDKPD+R P+ + ++
Sbjct: 256 FITQDDLFVILENLFQHLTKTFTQKSIRQFPFPRIPFRESMDKYGTDKPDVRVPLEIQDL 315

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++ FV S+F+VFS   +  PG  V A+  KG G  +R F D+    A+  G PGLAYI +
Sbjct: 316 SDFFVDSDFKVFSS--NCKPGRCVKALVLKGKGNESRLFYDKAEAHAKEHGSPGLAYIQF 373

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +     N    GP+ K L     +A++ RL ++ GD  FF AG   K C      RN+ A
Sbjct: 374 K-----NEGPKGPILKFLKEGELQALKERLGLEQGDVVFFGAGAWEKTCKIMGAMRNYFA 428

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             L  I+ N   FCWI+DFP YE+NE+EKKIDF+HNPF+MPQGGM++L   D L I A+Q
Sbjct: 429 P-LYPIDKNELAFCWIVDFPMYEYNEDEKKIDFSHNPFSMPQGGMDALTQKDPLDILAYQ 487

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+VCNG E++SG IRNH  E+M +AF   G  KE VE  FG +  AF+ G PPHGGIA 
Sbjct: 488 YDIVCNGIELSSGAIRNHKPEIMYKAFEIAGYGKEEVERSFGHMLNAFKHGAPPHGGIAP 547

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VM+L   +N+REV  FPM+Q   DL+MG+P+ V+ +QL+EL + +   PKK
Sbjct: 548 GVDRLVMILRDEQNIREVIAFPMNQKAQDLMMGAPAEVAPKQLKELHISL-NLPKK 602


>gi|78188900|ref|YP_379238.1| aspartyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|97196622|sp|Q3AS30|SYD_CHLCH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78171099|gb|ABB28195.1| aspartyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 605

 Score =  587 bits (1512), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 299/598 (50%), Positives = 402/598 (67%), Gaps = 11/598 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFE 60
           +R+R+HSCG L  +     VRL+GWVHR R HGG+IF+D+RDH GI Q+V  P+  A F 
Sbjct: 12  NRFRSHSCGLLNATFEQQHVRLAGWVHRKRDHGGLIFIDLRDHTGICQLVIQPEQQALFA 71

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ + +E V+ ++G V+ R+   IN  + +G+IE+    + I S A  LP  V  E   
Sbjct: 72  EAEHLHNESVISVEGTVILRAENAINPRLSSGEIEVVISCMSIESNAHPLPFSVADELPT 131

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR+ LH+NI+ R+R+  ++R  +  +NF E  TPILT+SSPEGARDF
Sbjct: 132 SEELRLKYRFLDLRREKLHENIIFRSRLTAAVRRYLEEKNFTEIQTPILTSSSPEGARDF 191

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GF RYFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 192 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFPRYFQIAPCFRDEDARADRSPGEFYQLDME 251

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQ+++   +E +L  +    S        F RI Y D + R+GTDKPDLR P+ + 
Sbjct: 252 MAFIEQENLFEILEGMLEHITSTMSKKRITQVPFPRISYRDVMNRFGTDKPDLRIPLEIQ 311

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +VT  FV S F+VF+K  +  PG  V A+  KG G  +R F D+  + A+  G  GLAYI
Sbjct: 312 DVTSLFVDSGFKVFAK--NTVPGCCVKALVVKGRGNESRLFYDKAEKRAKELGSAGLAYI 369

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            ++ DE       GP+ K L+  +  A++  L+++ GD  FF AG     C      RN+
Sbjct: 370 QFK-DEGAK----GPLVKFLSEDDMNALKQHLNLEQGDVVFFGAGKWEVTCKIMGGMRNY 424

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A +L  ++ +   FCWI+DFP YE+NEE KKIDF+HNPF+MPQG ME+L+  D L I A
Sbjct: 425 FA-DLFTLDKDELSFCWIVDFPMYEYNEEAKKIDFSHNPFSMPQGEMEALETKDALDILA 483

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+M +AF+  G S+E V+ RFG +  AF+ G PPHGGI
Sbjct: 484 YQYDIVCNGIELSSGAIRNHKPEIMYKAFAIAGYSREEVDQRFGHMIEAFKLGAPPHGGI 543

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VM+L   +N+REV  FPM+Q   DL+M +PS V++ QLREL L+ VE PKK
Sbjct: 544 APGLDRLVMILCDEQNIREVIAFPMNQQAQDLMMSAPSEVTLAQLRELHLK-VELPKK 600


>gi|110598222|ref|ZP_01386498.1| aspartyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110340137|gb|EAT58636.1| aspartyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 615

 Score =  585 bits (1509), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 301/598 (50%), Positives = 399/598 (66%), Gaps = 11/598 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFE 60
           +R+R+  CG L      S VRL GWVHR R HGG+IF+D+RDH GI+Q+V  P+    FE
Sbjct: 22  NRFRSEYCGLLSPELEHSTVRLGGWVHRKRDHGGLIFIDLRDHTGISQLVIQPEQHDLFE 81

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  + SE V+CI+G V+ RS  TIN  + +G+IE+   ++ + S A+ LP PV  E + 
Sbjct: 82  AAGQLHSESVICIEGEVVLRSPSTINPKLASGEIEVVVSRLTVESNAQPLPFPVADEVQT 141

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRF+DLRR+ +H+NI+ R+R+  ++R  +    FIE  TPILT+SSPEGARDF
Sbjct: 142 SEELRLKYRFIDLRREKIHENIIFRSRLTAAIRRYLEEREFIEIQTPILTSSSPEGARDF 201

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 202 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQLDME 261

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQDD+   +E ++  +    S        F RI Y D + R+GTDKPDLR PI + 
Sbjct: 262 MAFIEQDDLFAILEGMVEHLTRTMSEKRITQFPFPRISYKDVMNRFGTDKPDLRIPIEIS 321

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +VT  FV+S F+VF+   +  PG  V A+  KG G  +R F D+  + AR  G  GLAYI
Sbjct: 322 DVTSLFVNSSFKVFAS--NTVPGTCVKALLLKGRGHESRLFYDKAEKRARELGSGGLAYI 379

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +R  E G     GPV K L+  +   ++  L ++ GD  FF AG   + C      R +
Sbjct: 380 QFR--EEGP---KGPVVKFLSEEDLATLKSHLGVETGDVVFFGAGKWEQTCRIMGGMRTY 434

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
              +L  ++ +   FCWI+DFP +E+NEE KKIDF+HNPF+MPQG ME+L+    L I A
Sbjct: 435 FG-DLFTLDKDELSFCWIVDFPMFEYNEEAKKIDFSHNPFSMPQGEMEALETKSPLDILA 493

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  ++M +AF   G  KE V+ RFG +  AF+ G PPHGGI
Sbjct: 494 YQYDIVCNGIELSSGAIRNHRPDIMYKAFEIAGYPKEEVDLRFGHMIEAFKLGAPPHGGI 553

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VM+L   +N+REV  FPM+Q+  DL+M SPS V+ +QL+EL LR VE PKK
Sbjct: 554 APGLDRLVMILRDEQNIREVIAFPMNQSAQDLMMSSPSEVTPQQLKELHLR-VELPKK 610


>gi|297201066|ref|ZP_06918463.1| aspartyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197712149|gb|EDY56183.1| aspartyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 587

 Score =  585 bits (1507), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 294/592 (49%), Positives = 402/592 (67%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRSSDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E  + +DG V+SR  E +N ++ TG++E+   ++E+L  A  LP  +  E   
Sbjct: 61  ALDKLTKESTVRVDGKVVSRGTENVNPDLPTGEVEVEVGEVELLGAAAPLPFTINTEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +HKNI+ R+ +I S+R +M+A  F E +TPIL+A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHKNIMLRSSVIASIRSKMVALGFNEMATPILSATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF NG  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           ++T+ F  SEF+ F+       G  V A+         R F D++ ++A SQG  GLA++
Sbjct: 301 DITDVFEGSEFKAFA-------GKHVRALAVPDVSAQPRKFFDQLGDFAVSQGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G+++  GP+AK L   N   +  RL +  G + FF AG+  +        R  
Sbjct: 354 --RVAEDGSLS--GPIAKFLTEENVAELTKRLLLAAGHAVFFGAGEFDEVSKIMGAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G    N F FCWI+DFP YE +EE   IDF+HNPF+MPQGG+E+L+  D L I  
Sbjct: 410 AAKRAGHFEENVFRFCWIVDFPMYEKDEETGAIDFSHNPFSMPQGGLEALETQDPLDILG 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  ++ML+AF   G  +E VE +F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPDIMLKAFEIAGYDRETVEEKFAGMLRAFRFGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL L +
Sbjct: 530 APGVDRIVMLLADEPNIRETISFPLNGNAQDLMMGAPTELEEARLRELHLSV 581


>gi|282863865|ref|ZP_06272923.1| aspartyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282561566|gb|EFB67110.1| aspartyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 605

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 290/592 (48%), Positives = 400/592 (67%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYG+ Q+VA P +   E
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPGNE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E V+ IDG V +R A+ +N  + TG+IE+   ++E+L  A  LP  +  E   
Sbjct: 61  ALAKLTKETVVRIDGKVSARGADNVNPELPTGEIEIEVTEVEVLGEAGPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF NG  V++ F RI + +++ +YG DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFRESMLKYGNDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F  S F+ F+       G  V A+P     G +R F D + E+A   G  GLA++
Sbjct: 301 DISDVFADSGFKAFA-------GKHVRALPVPDTAGQSRKFFDGLGEYAVEHGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G +A  GP+AK L   + + +  RL +  G + FF AG+  +     +  R  
Sbjct: 354 --RVGEDGTLA--GPIAKFLTETDVKTLTERLSLVPGHAVFFGAGEFDEVSKIMSAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G      F FCW++DFP YE +EE  +IDF+HNPF+MPQGG+E L+  D L I A
Sbjct: 410 AAKRSGHFEEGVFRFCWVVDFPMYEKDEETGRIDFSHNPFSMPQGGLEDLETKDPLDILA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+M++AF   G  +E VE+ F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPELMIKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTVLDETRLRELNIQL 581


>gi|290958925|ref|YP_003490107.1| aspartyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260648451|emb|CBG71562.1| aspartyl-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 587

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 293/592 (49%), Positives = 402/592 (67%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E  + +DG V+SR +E +N ++ TG+IE+   ++E+L  A  LP  +  E   
Sbjct: 61  ALDRISKESTVRVDGKVVSRGSENVNPDLPTGEIEVEVGEVELLGAAAPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+++R +M A  F E +TPIL+A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILSATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF NG  V++ F RI + +++ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFRESMLKYGSDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           ++T+ F  SEF+ F+       G  V A+         R F D++ E+A  QG  GLA++
Sbjct: 301 DITDVFEGSEFKAFA-------GKHVRALAVPDVSAQPRKFFDQLGEYAIEQGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G+++  GP+AK L   N   +  RL +  G + FF AG+  +        R  
Sbjct: 354 --RVAEDGSLS--GPIAKFLTEENVAELTKRLSLAAGHAVFFGAGEFDEVSKIMGAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G      F FCWI+DFP YE +EE  KIDF+HNPF+MPQGG+E+L+  D L I  
Sbjct: 410 AAKRAGHFEEGVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLEALETQDPLDILG 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  ++ML+AF   G  +E VE +F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPDIMLKAFEIAGYDRETVEEQFAGMLRAFRFGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL L +
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELEEARLRELHLSV 581


>gi|189347020|ref|YP_001943549.1| aspartyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|238692154|sp|B3EDE5|SYD_CHLL2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189341167|gb|ACD90570.1| aspartyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 605

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 296/601 (49%), Positives = 398/601 (66%), Gaps = 10/601 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFE 60
           +R+RT  CG LGV      VRL GWVHR R HGG+IF+D+RDH G+ Q+V  P+  A F 
Sbjct: 13  NRFRTDYCGLLGVGSENRSVRLGGWVHRKRDHGGLIFIDLRDHTGVCQLVIQPEQQALFN 72

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + + +E V+CI+G V+ RS+ET+N  + +G+IE+    + I S A+ LP PV  E   
Sbjct: 73  AVEHLHAESVICIEGTVVLRSSETVNTRLASGEIEVVVSSVIIESDAQPLPFPVADEVPT 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRF+DLRR+ +H+NI+ R+R+   +R  +    FIE  TPILT+SSPEGARDF
Sbjct: 133 SEELRLKYRFIDLRREKIHENIIFRSRLTAMVRRYLEEREFIEIQTPILTSSSPEGARDF 192

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQ+DME
Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQIDME 252

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQ+D+   +E + + + E  S        F RI Y + + R+G+DKPDLR P+ + 
Sbjct: 253 MAFIEQNDLFEILEGMFKHLTENMSQKRITQFPFPRISYREVMNRFGSDKPDLRIPLEIQ 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +VT  FV+S F+VF+   +   G  V A+  KG GG +R F D+  + AR  G  GLAYI
Sbjct: 313 DVTSLFVNSSFKVFAS--NTKEGTCVKALVLKGRGGESRMFYDKAEKRARELGSAGLAYI 370

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +R  E G     GP+ K L     E ++ +L ++ GD  FF AG     C      R +
Sbjct: 371 QFR--EEGP---KGPIVKFLGEAEMEVLKEQLGLETGDVVFFGAGKWESTCKIMGGMRIY 425

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A +L  ++ +   FCWI+DFP YE+NEE KKIDF+HNPF+MPQG ME+L+    L I A
Sbjct: 426 FA-DLFDLDKDELSFCWIVDFPMYEYNEEAKKIDFSHNPFSMPQGEMEALETMQPLDILA 484

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  ++M +AF   G +KE V++RFG +  AF+ G PPHGGI
Sbjct: 485 YQYDIVCNGIELSSGAIRNHRPDIMYRAFEIAGYTKEEVDSRFGHMIDAFKLGAPPHGGI 544

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           A G+DR+VM+L   +N+REV  FPM+Q   DL+M +PS V  +QL+EL L+I   P K  
Sbjct: 545 APGLDRMVMILRDEQNIREVIAFPMNQQAQDLMMSAPSEVMAQQLKELHLKIDLPPVKEA 604

Query: 600 K 600
           K
Sbjct: 605 K 605


>gi|239942578|ref|ZP_04694515.1| aspartyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239989039|ref|ZP_04709703.1| aspartyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291446040|ref|ZP_06585430.1| aspartyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291348987|gb|EFE75891.1| aspartyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 597

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 291/592 (49%), Positives = 398/592 (67%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYG+ Q+VA P +   E
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPGNE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E V+ IDG V +R A+ +N  + TG+IE+   ++E+L  A  LP  +  E   
Sbjct: 61  ALAKLTKETVVRIDGKVSARGADNVNPELPTGEIEIEVSEVEVLGEAAPLPFTINTEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +F EF NG  V++ F RI + +++ +YG DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFTEFGNGREVTSPFPRIPFRESMLKYGNDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F  S F+ F+       G  V A+P     G +R F D + E+A   G  GLA++
Sbjct: 301 DISDVFADSGFKAFA-------GKHVRALPVPDTAGQSRKFFDGLGEYAVEHGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G +A  GP+AK L   + + +  RL +  G + FF AG+  +     +  R  
Sbjct: 354 --RVGEDGTLA--GPIAKFLTETDVKTLTERLSLVPGHAVFFGAGEFDEVSKIMSAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G      F FCWI+DFP YE +EE  +IDF+HNPF+MPQGG+  L+  D LSI A
Sbjct: 410 AAKRAGHFEEGVFRFCWIVDFPMYERDEETGRIDFSHNPFSMPQGGLADLEEKDPLSILA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+ML+AF   G  +E VE  F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPELMLKAFEIAGYDRETVEQEFAGMLRAFRLGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELNIQL 581


>gi|193212990|ref|YP_001998943.1| aspartyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|238692646|sp|B3QP90|SYD_CHLP8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|193086467|gb|ACF11743.1| aspartyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 603

 Score =  583 bits (1502), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 293/592 (49%), Positives = 399/592 (67%), Gaps = 10/592 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFE 60
           +R+RTH CG L     G+ V+L GWVHR+R HGG+IF+D+RDH GI Q+V  P+S   F 
Sbjct: 13  NRFRTHYCGLLNRDSEGAGVKLGGWVHRIRDHGGLIFIDLRDHTGICQLVIQPESGELFR 72

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA+ + SE V+  +G V+ RS ET+N  + +G IE+    I+I S A  LP PV      
Sbjct: 73  IAEGLHSESVISAEGSVVLRSDETVNPRLASGAIEVVVSAIKIESAAHPLPFPVADYMPT 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR+ LH+NI+ R+++  ++R  +   +FIE  TPILT+SSPEGARDF
Sbjct: 133 SEELRLKYRFLDLRRERLHENIIFRSQLTAAVRKYLTDLDFIEIQTPILTSSSPEGARDF 192

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQ+D+E
Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQVDIE 252

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD+   +E + + + E  +        F RI Y D + RYG+DKPDLR PI + 
Sbjct: 253 MSFVEQDDLFVILEGMFKHLVETMTTKRIAQYPFPRISYKDVMNRYGSDKPDLRIPIEIQ 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +VTE FV+S F+VF+   +   G  V A+  KG G  +R F D+  + AR  G  GLAYI
Sbjct: 313 DVTELFVNSGFKVFAS--NTKEGCCVKAMVLKGMGNESRLFYDKAEKRARELGSAGLAYI 370

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            ++ +     A  GPV K L      A++ +L ++ GD  FF AG   + C      RN+
Sbjct: 371 QFKEE-----APKGPVVKFLKEEEMAALKEQLGIETGDVVFFGAGKWEQTCKIMGGMRNY 425

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A ++  ++ +   FCWI+DFP +E+NEE+KKIDF+HNPF+MPQG ME+L+ +  L I A
Sbjct: 426 FA-DVFPLDRDELSFCWIVDFPMFEYNEEDKKIDFSHNPFSMPQGEMEALEQHSPLDILA 484

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  ++M +AF   G   + V+ RFG +  AF+ G PPHGGI
Sbjct: 485 YQYDIVCNGIELSSGAIRNHRPDIMYKAFEIAGYPHDEVDARFGHMIEAFKHGAPPHGGI 544

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VM+L   +N+REV  FPM+Q+  DL+M +PS V+ +QL+EL +++
Sbjct: 545 APGLDRLVMILRDEQNIREVIAFPMNQSAQDLMMAAPSEVTAQQLKELHIKV 596


>gi|320009829|gb|ADW04679.1| aspartyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 605

 Score =  582 bits (1500), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 289/592 (48%), Positives = 400/592 (67%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYG+ Q+VA P +   +
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPGND 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E V+ IDG V +R A+ +N  + TG+IE+   ++E+L  A  LP  +  E   
Sbjct: 61  ALAKLTKETVVRIDGKVSARGADNVNPELPTGEIEIEVTEVEVLGEAGPLPFTINTEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF NG  V++ F RI + +++ +YG DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFRESMLKYGNDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F  S F+ F+       G  V A+P     G +R F D + E+A   G  GLA++
Sbjct: 301 DISDIFADSGFKAFA-------GKHVRALPVPDTAGQSRKFFDGLGEYAVEHGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G +A  GP+AK L   + + +  RL +  G + FF AG+  +     +  R  
Sbjct: 354 --RVGEDGTLA--GPIAKFLTEADVKTLTERLSLVPGHAVFFGAGEFDEVSKIMSAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G      F FCW++DFP YE +EE  +IDF+HNPF+MPQGG+E L+  D L I A
Sbjct: 410 AAKRAGHFEEGVFRFCWVVDFPMYEKDEETGRIDFSHNPFSMPQGGLEDLETKDPLDILA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+M++AF   G  +E VE+ F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPELMIKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTVLDETRLRELNIQL 581


>gi|182437583|ref|YP_001825302.1| aspartyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|238688986|sp|B1VQW8|SYD_STRGG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|178466099|dbj|BAG20619.1| putative aspartyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 599

 Score =  582 bits (1499), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 290/592 (48%), Positives = 398/592 (67%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYG+ Q+VA P +   +
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPGND 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E V+ IDG V +R A+ +N  + TG+IE+   ++E+L  A  LP  +  E   
Sbjct: 61  ALAKLTKETVVRIDGKVSARGADNVNPELPTGEIEIEVTEVEVLGEAGPLPFTINTEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +F EF NG  V++ F RI + +++ +YG DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFTEFGNGREVTSPFPRIPFRESMLKYGNDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F  S F+ F+       G  V A+P     G +R F D + E+A   G  GLA++
Sbjct: 301 DISDVFADSGFKAFA-------GKHVRALPVPDTAGQSRKFFDGLGEYAVEHGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G +A  GP+AK L   + + +  RL +  G + FF AG+  +     +  R  
Sbjct: 354 --RVGEDGTLA--GPIAKFLTETDVKTLTERLSLVPGHAVFFGAGEFDEVSKIMSAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G      F FCWI+DFP YE +EE  KIDF+HNPF+MPQGG+  L+  D L I A
Sbjct: 410 AAKRAGHFEEGVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLADLEEKDPLDILA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+ML+AF   G  +E VE+ F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPELMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDESRLRELNIQL 581


>gi|302552795|ref|ZP_07305137.1| aspartyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302470413|gb|EFL33506.1| aspartyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 587

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 292/592 (49%), Positives = 401/592 (67%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRSSDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPSYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E  + +DG V+SR  E IN  + TG++E+   ++E+L  A  LP  +  E   
Sbjct: 61  ALDKLSKESTVRVDGKVVSRGGENINPELPTGEVEVEVGEVELLGAAAPLPFTINTEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+++R +M A  F E +TPIL+A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILSATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLHPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF  G  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPVEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           ++T+ F  SEF+ F+       G  V A+P        R F D++ ++A SQG  GLA++
Sbjct: 301 DITDIFEGSEFKAFA-------GKHVRALPVPDVSAQPRKFFDQLGDYAVSQGARGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G+++  GP+AK L   N   +  RL +  G + FF AG+  +        R  
Sbjct: 354 --RVAEDGSLS--GPIAKFLTEENVAELTKRLSLAAGHAVFFGAGEFDEVSKIMGAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G    N F FCWI+DFP YE +EE   IDF+HNPF+MPQGG+E+L+  D L I  
Sbjct: 410 AAKRAGHFEENVFRFCWIVDFPMYEKDEETGAIDFSHNPFSMPQGGLEALESQDPLDILG 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+ML+AF   G  ++ VE +F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGVELSSGAIRNHEPEIMLKAFEIAGYDRDTVEEKFAGMLRAFRFGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +L+EL L +
Sbjct: 530 APGVDRIVMLLADEPNIRETISFPLNGNAQDLMMGAPTELEEARLKELHLSV 581


>gi|326778237|ref|ZP_08237502.1| aspartyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326658570|gb|EGE43416.1| aspartyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 595

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 290/592 (48%), Positives = 398/592 (67%), Gaps = 12/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYG+ Q+VA P +   +
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPGND 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E V+ IDG V +R A+ +N  + TG+IE+   ++E+L  A  LP  +  E   
Sbjct: 61  ALAKLTKETVVRIDGKVSARGADNVNPELPTGEIEIEVTEVEVLGEAGPLPFTINTEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +F EF NG  V++ F RI + +++ +YG DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFTEFGNGREVTSPFPRIPFRESMLKYGNDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F  S F+ F+       G  V A+P     G +R F D + E+A   G  GLA++
Sbjct: 301 DISDVFADSGFKAFA-------GKHVRALPVPDTAGQSRKFFDGLGEYAVEHGAKGLAWV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G +A  GP+AK L   + + +  RL +  G + FF AG+  +     +  R  
Sbjct: 354 --RVGEDGTLA--GPIAKFLTETDVKTLTERLSLVPGHAVFFGAGEFDEVSKIMSAVRVE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+  G      F FCWI+DFP YE +EE  KIDF+HNPF+MPQGG+  L+  D L I A
Sbjct: 410 AAKRAGHFEEGVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLADLEEKDPLDILA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+ML+AF   G  +E VE+ F G+ RAF+ G PPHGGI
Sbjct: 470 WQYDIVCNGIELSSGAIRNHEPELMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++
Sbjct: 530 APGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDESRLRELNIQL 581


>gi|194334276|ref|YP_002016136.1| aspartyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|238693338|sp|B4S8V2|SYD_PROA2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|194312094|gb|ACF46489.1| aspartyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 608

 Score =  579 bits (1493), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 290/592 (48%), Positives = 394/592 (66%), Gaps = 10/592 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFE 60
           +R+R+H CG L        VRL+GW+HR R HGG+IF+D+RDH GI Q++  P+    F+
Sbjct: 13  NRFRSHFCGRLNTEYENKQVRLAGWIHRKRDHGGLIFIDLRDHTGIAQLIIQPEKQELFQ 72

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +  E V+ + G V+ RS ET+N+ I +G IE+    +++ S A  LP PV  E + 
Sbjct: 73  KVERLHVESVIAVQGTVVKRSEETLNSRIPSGAIEVLVDDVQVESHAVALPFPVADELQT 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R  YRFLDLRR+ +H+NIV R+++I+ +R  +    F+E  TPILTASSPEGARDF
Sbjct: 133 SEELRLTYRFLDLRREKIHQNIVFRSQLISKVRRYLEDHGFMEIQTPILTASSPEGARDF 192

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQ+DME
Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQVDME 252

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQDD+   +E +LR + E  S        F R+ Y D + R+G+DKPDLR P+ M 
Sbjct: 253 MAFIEQDDLFEILEGMLRYLTETMSTKRITQFPFPRLSYRDVMNRFGSDKPDLRVPLEMQ 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +VTE FV S F+VF+   +   G  + A+  KG G  +R F D+  + AR  G PGLAY+
Sbjct: 313 DVTELFVGSSFKVFAS--NTKEGSCIKAMVLKGRGTESRQFYDKAEKRARELGAPGLAYV 370

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +R  E G     GP+ K L+     A++ RL ++ GD  FF AG   K C      R +
Sbjct: 371 QYR--EEGP---KGPIVKFLSEAELSALQERLAIETGDVVFFGAGKWEKTCKIMGGIREY 425

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            + +L  ++ +   FCWI+DFP YE++E+E +IDF+HNPF+MPQG M++L   + L I A
Sbjct: 426 FS-DLFELDRDELSFCWIVDFPLYEFDEKESRIDFSHNPFSMPQGEMDALDTMNPLDILA 484

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  ++M +AF   G SKE V+ RFG +  AF+ G PPHGGI
Sbjct: 485 YQYDIVCNGIELSSGAIRNHRPDIMYRAFEIAGYSKEEVDKRFGHMIEAFKMGAPPHGGI 544

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VM+L    N+REV  FPM+Q   DL+M +PS VS  QLREL L++
Sbjct: 545 APGLDRLVMILRDEHNIREVIAFPMNQQAQDLMMSAPSDVSRLQLRELHLKL 596


>gi|145219859|ref|YP_001130568.1| aspartyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|189082135|sp|A4SF07|SYD_PROVI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145206023|gb|ABP37066.1| aspartyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 602

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 289/592 (48%), Positives = 394/592 (66%), Gaps = 10/592 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFE 60
           +R+RTH CG LG       V L+GWVHR+R HGG++F+D+RDH GI Q+V  P+    FE
Sbjct: 13  NRFRTHYCGSLGPVLQQEKVSLAGWVHRIRDHGGLVFIDLRDHTGICQLVIQPEEKELFE 72

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  + +E V+ I+G V+ RS ET+NA + +G IE+    + + S A  LP PV  E   
Sbjct: 73  QASHLHAESVIAIEGSVVLRSPETVNARLASGAIEVVVSALTVESNARPLPFPVADELPT 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRF+DLRR+ +H+NI+ R+R+ +++R  +   +F+E  TPILT+SSPEGARDF
Sbjct: 133 SEELRLKYRFIDLRREKIHENIIFRSRVSSAIRRYLEERDFVEIQTPILTSSSPEGARDF 192

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GF RYFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFPRYFQIAPCFRDEDARADRSPGEFYQLDME 252

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQDD+   +E + R +    S     +  F RI Y D + R+GTDKPDLR P+ + 
Sbjct: 253 MAFIEQDDLFEILEGMFRHLVTSMSKKRITAFPFPRISYRDVMNRFGTDKPDLRIPLEIA 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +VT  FV+S F+VF+   +   G  V A+  KG G  +R F D+  + A+  G  GLAYI
Sbjct: 313 DVTPLFVNSGFKVFAA--NTKEGCAVKALVLKGRGTESRLFYDKAEKRAKELGSAGLAYI 370

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +R  E G     GP+ K ++     +++ +L ++ GD  FF AG     C      R +
Sbjct: 371 QFR--EEGL---KGPIVKFMSEGEIASMKEQLSLETGDVVFFAAGKWEAACRIMGGMRTY 425

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
              EL  ++ +   FCWI+DFP YE+NEE  KIDF+HNPF+MPQG ME+L+  D L + A
Sbjct: 426 FG-ELFTLDHDELSFCWIVDFPMYEYNEEAGKIDFSHNPFSMPQGEMEALETMDPLELLA 484

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  ++M +AF   G SKE V+ RFG +  AF+ G PPHGGI
Sbjct: 485 YQYDIVCNGIELSSGAIRNHRPDIMYRAFEIAGYSKEDVDLRFGHMIEAFKLGAPPHGGI 544

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VM+L   +N+REV  FPM+Q   DL+M +PS V+  QLREL +++
Sbjct: 545 APGLDRLVMILRDEQNIREVIAFPMNQQAEDLMMSAPSEVTTAQLRELHIKL 596


>gi|308069761|ref|YP_003871366.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase) [Paenibacillus
           polymyxa E681]
 gi|305859040|gb|ADM70828.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 589

 Score =  576 bits (1484), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 287/596 (48%), Positives = 401/596 (67%), Gaps = 18/596 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG+L    VG  VR++GW+  +R HGG+IF+D+RDHYG+TQ+V + ++   +
Sbjct: 1   MHSYRTHNCGELDQKHVGEVVRIAGWIKNMRDHGGVIFIDLRDHYGVTQIVVSDNNELKD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGERE 119
               +  E  + + G V +RS  TI+  + TG IEL+A +I++L  V   LP  V    E
Sbjct: 61  FVSKISRESTISVTGTVCNRSENTISPTMKTGHIELAANEIKVLGKVVNPLPFEVSLANE 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYRFLDLR + +H NI+ R+++I S+R +MI  NF+E  TPILT+SSPEGARD
Sbjct: 121 AREDLRLKYRFLDLRNEKIHNNIILRSKVIQSIRRKMIDLNFLEIQTPILTSSSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 YLVPSRVHPGQFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDL 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+F  Q+D+ N +EN+L  VF EF+N   +S  F RI Y +A+ +YG+DKPDLRNP+I+
Sbjct: 241 EMAFATQEDVFNVVENMLYEVFSEFTNFK-ISKPFTRIPYQEAMLKYGSDKPDLRNPLII 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           H+VTE F  ++F+VF      N    V A+P   G   R+F D +  +A   G  GL++I
Sbjct: 300 HDVTELFTETDFKVFK-----NKTIRVIAVPG-CGAQPRSFYDDIVNFAVEAGAKGLSWI 353

Query: 360 FWRLDESGNVAGMGPVAKHLN-IVNTEAIRVRLDMQDGDSC-FFIAGDPLKFCSFAADA- 416
            +  D S +    G +AK ++  V  + I V    Q    C  F A D LK     A A 
Sbjct: 354 KFNDDMSLS----GSIAKFISEEVKNQLIHV---TQASSGCALFFAADQLKNVEKIAGAV 406

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           RN + + L ++  + ++FCWI+DFP +E + +  KI F+HNPF+MPQGGM++L   + L 
Sbjct: 407 RNQLGKRLDLLEKDIYKFCWIVDFPMFELDPDTHKIGFSHNPFSMPQGGMDALLNMNPLD 466

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I A+QYD+VCNG E++SG +RNH +E+M++AF   G +   ++++F  L+ AFQ G PPH
Sbjct: 467 ILAYQYDIVCNGIELSSGAVRNHDTEIMVKAFEIAGYTYGDIKSKFPALFNAFQFGPPPH 526

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            GIA GIDRIVM++    N+REV  FPM+    DLLMG+PS V+ +QLR++ +++V
Sbjct: 527 AGIAPGIDRIVMIIANESNIREVIAFPMNSKAQDLLMGAPSEVTEKQLRDVHIKLV 582


>gi|189499969|ref|YP_001959439.1| aspartyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|238692298|sp|B3EQ26|SYD_CHLPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189495410|gb|ACE03958.1| aspartyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 608

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 282/592 (47%), Positives = 395/592 (66%), Gaps = 10/592 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFE 60
           +R+R+H CG L        + ++GWVHR+R HGG+IF+D+RDH GI Q++  P+    F 
Sbjct: 13  NRFRSHFCGRLHTEFENKTIAVAGWVHRIRDHGGLIFIDLRDHTGICQLIIQPEKEELFR 72

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+++ +E V+C+ G+V+ RS ET+N  + +G+IE+  + I + S A  LP PV  E + 
Sbjct: 73  KAEALHTESVICVSGVVVRRSEETVNPRLASGEIEVVVEDIRVESNASPLPFPVADELQT 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR+ +H+NI  R+R+I+ +R  +   +F+E  TPILT+SSPEGARDF
Sbjct: 133 SEELRLKYRFLDLRREKIHENIHFRSRLISEVRRYLEERSFMEIQTPILTSSSPEGARDF 192

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQ+DME
Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFSRYFQIAPCFRDEDARADRSPGEFYQIDME 252

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQDD+   +E + + + E+ SN       F RI Y + + RYG+DKPDLR P+ + 
Sbjct: 253 MAFIEQDDLFEILEGMFKHLTEKMSNKRITQFPFPRISYKEVMNRYGSDKPDLRIPVEIE 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +VTE FV+S F+VF+   +   G  + A+  KG G  +R F D+    A+  G  GLAYI
Sbjct: 313 DVTELFVNSSFKVFAG--NTKEGNCIKAMVLKGRGNESRQFYDKAERRAKELGSAGLAYI 370

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            ++  E G     GP+ K  +      ++ RL ++ GD  FF AG   + C      R +
Sbjct: 371 QYK--EEG---PKGPIVKFFSEDEMNDLKERLQIEAGDVVFFGAGKWERTCKIMGGMREY 425

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            + +L  ++ +   FCW++DFP YE++E  KKI+F+HNPF+MPQG ME+L+  D L I A
Sbjct: 426 FS-DLFELDRDELSFCWVVDFPMYEYDEAAKKIEFSHNPFSMPQGEMEALETMDPLDILA 484

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  ++M +AF   G  K  V+ RFG +  AF  G PPHGGI
Sbjct: 485 YQYDIVCNGIELSSGAIRNHRPDIMYRAFGIAGYEKAEVDKRFGHMIEAFNMGAPPHGGI 544

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VM+L   +N+REV  FPM+Q   DL+M +P+ VS  QLREL L++
Sbjct: 545 APGLDRLVMILRDEQNIREVIAFPMNQQAEDLMMAAPAEVSPLQLRELSLKL 596


>gi|194336680|ref|YP_002018474.1| aspartyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|238693359|sp|B4SAH1|SYD_PELPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|194309157|gb|ACF43857.1| aspartyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 601

 Score =  573 bits (1476), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 295/598 (49%), Positives = 397/598 (66%), Gaps = 11/598 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFE 60
           +R+R+  CG L        VRL+GWVHR R HGG+IF+D+RDH GI+Q+V  P+    F 
Sbjct: 13  NRFRSDYCGLLCPEREHGSVRLAGWVHRKRDHGGLIFIDLRDHTGISQLVIQPEQQELFA 72

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +  E V+CI+G+V+ R+   IN+ + +G+IE+   +I + S A  LP PV  E   
Sbjct: 73  KAEQLHVESVICIEGVVVLRAPGAINSRLASGEIEVVVSQITVESNAHPLPFPVADEVVT 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRF+DLRR+ +H+NI+ R+R+  ++R  +  ++FIE  TPILT+SSPEGARDF
Sbjct: 133 SEELRLKYRFIDLRREKIHENIIFRSRLTAAIRRYLEEQDFIEIQTPILTSSSPEGARDF 192

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQLDME 252

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQ+D+   +E ++  +    S+       F RI Y + + R+GTDKPDLR P+ + 
Sbjct: 253 MAFIEQNDLFTILEGMIEHLTRTMSHKRITQFPFPRISYKEVMNRFGTDKPDLRIPLEIS 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +VT  FV S F+VF+   S   G  V A+  KG G  +R F D+  + A+  G  GLAYI
Sbjct: 313 DVTPLFVGSAFKVFAN--STVEGSCVKALVVKGRGNESRLFYDKAEKRAKELGSGGLAYI 370

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +R  E G     GPV K L+  +   ++  L ++ GD  FF AG     C      R +
Sbjct: 371 QFR--EEGP---KGPVVKFLSEADLATLKEHLGLETGDVVFFGAGKWESTCKIMGGMRTY 425

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
              +L  ++ +   FCWI+DFP YE+NEE KKIDF+HNPF+MPQG ME+L+    L I A
Sbjct: 426 FG-DLFTLDKDELSFCWIVDFPMYEYNEEAKKIDFSHNPFSMPQGEMEALETMPPLDILA 484

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+M +AF   G S+E V+ RFG +  AF+ G PPHGGI
Sbjct: 485 YQYDIVCNGIELSSGAIRNHKPEIMYKAFGIAGYSREEVDARFGHMIEAFKLGAPPHGGI 544

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VM+L   +N+REV  FPM+Q   DL+MGSPS V+  QL+EL L+ VE PKK
Sbjct: 545 APGLDRLVMILCDEQNIREVIAFPMNQQAQDLMMGSPSEVTPVQLKELHLK-VELPKK 601


>gi|269959081|ref|YP_003328870.1| aspartyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848912|gb|ACZ49556.1| aspartyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 592

 Score =  572 bits (1475), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 298/595 (50%), Positives = 397/595 (66%), Gaps = 12/595 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M+ YRTH C +LGV+ VG+ V LSGWV+R R HGG++F+D+RD YGITQ++ N   +   
Sbjct: 1   MNIYRTHVCNELGVAHVGNEVALSGWVYRKRDHGGLLFVDLRDFYGITQLIFNESENPEL 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F    ++  E V+ + G+V  RS + +NA+I TG +E+    + ++S A  LPL V    
Sbjct: 61  FNRMATIGLESVITVRGIVAERSEDNVNASIETGHVEVKVSTLTVVSEAAPLPLHVPTSF 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
            YPE IR ++RFLDLR D +  +I+ R+ +++ +R  M A  FIE  TPILT+SSPEGAR
Sbjct: 121 SYPEDIRLQHRFLDLRCDKVKNSILLRSMVVSELRRAMEALGFIEVHTPILTSSSPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D++VPSR + G FYALPQAPQ +KQLLM  GFD+YFQIAPCFRDED R+DR PGEFYQLD
Sbjct: 181 DYIVPSRTHAGKFYALPQAPQIFKQLLMVGGFDKYFQIAPCFRDEDSRADRSPGEFYQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN-TVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           MEMSFV Q+D+   +E VL G+F +F+  +  V   F RI Y D++ RYG+DKPDLRNPI
Sbjct: 241 MEMSFVTQEDVFAAIEPVLYGLFAKFAGADKKVDRQFPRITYRDSMIRYGSDKPDLRNPI 300

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGL 356
           ++ +VTE F +S FR F     V  G  V AIPA    G  R+F D   E A+  G  GL
Sbjct: 301 VISDVTEIFRNSGFRTFQA--GVEAGEVVRAIPAPNTSGKPRSFFDDKIERAKEFGARGL 358

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            Y+ +  D +      GP+AK L+      IR    + +GDS FF++    K   FA   
Sbjct: 359 GYVTYEADGTAK----GPIAKFLSEDELARIRSAAGVDNGDSVFFMSDTADKAADFAGKI 414

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +  ELG+I  + F+FCWI+DFP+++   E+ K+DF HNPF+MPQG ME+L+  + L 
Sbjct: 415 RELLGLELGLIEHDTFKFCWIVDFPYFKC--EDGKLDFCHNPFSMPQGEMEALEQQNPLD 472

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I A+QYD+VCNG EI+SG IRNH  +VM +AFS VG  ++ V ++FG L RAF+ G PPH
Sbjct: 473 IIAYQYDIVCNGIEISSGAIRNHRLDVMYKAFSMVGYDEQTVNSKFGALVRAFKFGAPPH 532

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GG+A GIDRIVMLL  A N+REV  FP++Q   DLLMG+PS VS   L+EL + +
Sbjct: 533 GGLAPGIDRIVMLLADAPNIREVICFPLNQTGEDLLMGAPSEVSPAHLQELSIAL 587


>gi|119357451|ref|YP_912095.1| aspartyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|166979740|sp|A1BGZ4|SYD_CHLPD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119354800|gb|ABL65671.1| aspartyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 606

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 295/598 (49%), Positives = 396/598 (66%), Gaps = 11/598 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFE 60
           +R+RT  CG L        V+L GWVHR R HGG+IF+D+RDH GI Q+V  P+    F 
Sbjct: 13  NRFRTDYCGLLNPEVEHQSVKLGGWVHRKRDHGGLIFIDLRDHTGICQIVIQPEEQQLFA 72

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +  E V+CI+G V+ RS   +N  I +G+IE+ A  I + S A  LP PV  E + 
Sbjct: 73  KAEQLHLESVICIEGTVVRRSPGAVNPRIPSGEIEVVAAGISVESSAHPLPFPVADEVQT 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRF+DLRRD +H+NI+ R+R+  ++R  +  ++FIE  TPILT+SSPEGARDF
Sbjct: 133 SEELRLKYRFIDLRRDKIHENIIFRSRLTAAIRRYLEEKSFIEIQTPILTSSSPEGARDF 192

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQLDME 252

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQDD+   +E +   +    S        F RI + D + RYGTDKPDLR P+ + 
Sbjct: 253 MAFIEQDDLFEILEGMFSHLTGSMSTKRIREFPFPRISFRDVMNRYGTDKPDLRIPLEIS 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +VT  F+ S F+VF+   +   G  V A+  KG G  +R F D+  + A+  G  GLAYI
Sbjct: 313 DVTHLFLQSSFKVFAA--NTKEGCCVKAMLVKGRGNESRLFYDKAEKRAKELGSGGLAYI 370

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +R D        GP+ K L+     A+R  L ++ GD  FF AG   + C      R +
Sbjct: 371 QFRED-----GPKGPLVKFLSGEELAALRELLGVEVGDVVFFGAGKWEQTCRIMGGMRTY 425

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            + +L  ++ +   FCW++DFP YE+NE++KKIDF+HNPF+MPQG M++L+    L+I A
Sbjct: 426 FS-DLFTLDRDELAFCWVVDFPMYEYNEDQKKIDFSHNPFSMPQGEMDALESMPPLNILA 484

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  ++M +AF   G +KE V++RFG +  AF+ G PPHGGI
Sbjct: 485 YQYDIVCNGIELSSGAIRNHRPDIMYKAFEIAGYTKEDVDSRFGHMIEAFKLGAPPHGGI 544

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VM+L   +N+REV  FPM+Q   DL+MGSPS V+  QLREL L+ VE PKK
Sbjct: 545 APGLDRLVMILRDEQNIREVIAFPMNQQAQDLMMGSPSEVTPIQLRELHLQ-VELPKK 601


>gi|222474873|ref|YP_002563288.1| aspartyl-tRNA synthetase (aspS) [Anaplasma marginale str. Florida]
 gi|255002844|ref|ZP_05277808.1| aspartyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
 gi|255003976|ref|ZP_05278777.1| aspartyl-tRNA synthetase [Anaplasma marginale str. Virginia]
 gi|254781711|sp|B9KHS0|SYD_ANAMF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|222419009|gb|ACM49032.1| aspartyl-tRNA synthetase (aspS) [Anaplasma marginale str. Florida]
          Length = 592

 Score =  569 bits (1466), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 296/595 (49%), Positives = 397/595 (66%), Gaps = 12/595 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M+ YRTH C +LGV+ VG+ V LSGWV+R R HGG++F+D+RD YGITQ++ N   +   
Sbjct: 1   MNIYRTHVCNELGVAHVGNEVALSGWVYRKRDHGGLLFVDLRDFYGITQLIFNESENPEL 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F    ++  E V+ + G+V  RS + +NA+I TG +E+    + ++S A  LPL V    
Sbjct: 61  FNRMATIGLESVITVRGIVAERSEDNVNASIETGHVEVKVSTLTVVSEAAPLPLHVPTSF 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
            YPE IR ++RFLDLR D +  +I+ R+ +++ +R  M A  FIE  TPILT+SSPEGAR
Sbjct: 121 SYPEDIRLQHRFLDLRCDKVKNSILLRSMVVSELRRAMEALGFIEVHTPILTSSSPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D++VPSR + G FYALPQAPQ +KQLLM  GFD+YFQIAPCFRDED R+DR PGEFYQLD
Sbjct: 181 DYIVPSRTHAGKFYALPQAPQIFKQLLMVGGFDKYFQIAPCFRDEDSRADRSPGEFYQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN-TVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           MEMSFV Q+D+   +E VL G+F +F+  +  V   F RI Y D++ RYG+DKPDLRNP+
Sbjct: 241 MEMSFVTQEDVFAAIEPVLYGLFAKFAGADKKVDRQFPRITYRDSMIRYGSDKPDLRNPL 300

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGL 356
           ++ +VTE F +S FR F     V  G  V AIPA    G  R+F D   E A+  G  GL
Sbjct: 301 VISDVTEIFRNSGFRTFQA--GVEAGEVVRAIPAPNTSGKPRSFFDDKIERAKEFGARGL 358

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            Y+ +  D +      GP+AK L+      IR    + +GDS FF++    K   FA   
Sbjct: 359 GYVTYEADGTAK----GPIAKFLSEDELARIRSAAGVGNGDSVFFMSDTADKAADFAGKI 414

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +  ELG+I  + F+FCWI+DFP+++   E+ ++DF HNPF+MPQG ME+L+  + L 
Sbjct: 415 RELLGLELGLIEHDTFKFCWIVDFPYFKC--EDGELDFCHNPFSMPQGEMEALEQQNPLD 472

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I A+QYD+VCNG EI+SG IRNH  +VM +AFS VG  ++ V ++FG L RAF+ G PPH
Sbjct: 473 IIAYQYDIVCNGIEISSGAIRNHRLDVMYKAFSMVGYDEQTVNSKFGALVRAFKFGAPPH 532

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GG+A GIDRIVMLL  A N+REV  FP++Q   DLLMG+PS VS   L+EL + +
Sbjct: 533 GGLAPGIDRIVMLLADAPNIREVICFPLNQTGEDLLMGAPSEVSPAHLQELSIAL 587


>gi|330813925|ref|YP_004358164.1| aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase
           unambiguous [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487020|gb|AEA81425.1| aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase
           unambiguous [Candidatus Pelagibacter sp. IMCC9063]
          Length = 547

 Score =  568 bits (1465), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 275/551 (49%), Positives = 383/551 (69%), Gaps = 8/551 (1%)

Query: 47  ITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV 106
           +TQ V   DS+ FE  + ++ E V+ I G  + R+A+ INA + TG++E+    +E+L  
Sbjct: 1   MTQCVVQKDSSHFEEIEKLKLETVIKITGSCIKRAADAINAELDTGEMEVVVDSMEVLGS 60

Query: 107 AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
             ELP+PVF ++EY E IR KYRFLDLRR  +H+NI+ R+++I+ +R +M    F+E  T
Sbjct: 61  CGELPMPVFSDQEYSEDIRLKYRFLDLRRKKIHQNIILRSKVISFIRDKMSQLGFLEFQT 120

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           PILTASSPEGARDFLVPSR+N G FYALPQAPQQ+KQL+M +GFD+YFQIAPCFRDED R
Sbjct: 121 PILTASSPEGARDFLVPSRLNPGKFYALPQAPQQFKQLIMVAGFDKYFQIAPCFRDEDAR 180

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +DR PGEFYQLD+EMSFVEQ+DI   +E ++  VF +FS    +S  F RI YDDA+ +Y
Sbjct: 181 ADRSPGEFYQLDIEMSFVEQEDIFTILEKLMNDVFSQFSKKKVISKVFPRISYDDALLKY 240

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSE--FRVFSKILSVNPGYEVWAIP-AKGGGGNRAFCDR 343
           GTDKPDLRNP+++++ T+ F+  E  F +F K+  +  G  V AI   K     R+F D 
Sbjct: 241 GTDKPDLRNPLMIYDTTDLFLSEEVKFEIFKKL--IKQGSLVRAIKTTKTSEQPRSFFDG 298

Query: 344 MNEWARSQGQPGLAYIFWRLDESGNV-AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
           +++WA+ QG  GLAY+   ++ + NV +G GP+ K  +    + +    + + GDS FF 
Sbjct: 299 IDKWAKEQGASGLAYL--TIENNNNVLSGKGPIGKLFSETAIKELMKLCEAEVGDSIFFA 356

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
            G   +    +A AR+ IA EL +I+ N F FCWI+D+P +E +    KIDF+HNPF+MP
Sbjct: 357 CGKKSEVEKLSAIARDKIANELKLIDENTFAFCWIVDYPMFEQDPATNKIDFSHNPFSMP 416

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           QG ME++  N+ L+IKA+QYD+VCNG E++SG IRNH  E+M + F   G SK+ V+++F
Sbjct: 417 QGKMENIDFNNPLNIKAYQYDIVCNGIELSSGAIRNHKPELMYKLFGIAGYSKDQVDDKF 476

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
            G+  A   G PPHGGIA G+DRIVMLL   KN+REV++FPM+Q   DL+M +PS V+ +
Sbjct: 477 SGMINALSYGAPPHGGIAPGLDRIVMLLADEKNIREVTMFPMNQGAQDLMMNAPSDVTDQ 536

Query: 583 QLRELGLRIVE 593
           QL+EL L+ ++
Sbjct: 537 QLKELNLKKIK 547


>gi|291545264|emb|CBL18373.1| aspartyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 596

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 277/598 (46%), Positives = 387/598 (64%), Gaps = 14/598 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           +RYR H    +G  ++G  VR+SGWV  +R HGGI F+D+RDHYGI Q+    +    E 
Sbjct: 5   NRYRDHLTSMIGEGEIGKTVRVSGWVENIRDHGGIKFIDLRDHYGIVQITMQQNEGLLE- 63

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREY 120
              V  E  + + G V+ R A T N  I TG +E+ AQ +EIL  V   LP  V   RE 
Sbjct: 64  --GVNKESAVSVSGQVVKRDASTYNDKIATGTVEIVAQTLEILGKVTVPLPFEVPSSRES 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR +YRFLD+R   +H+NIV R+ I++ MR +M +  F+E  TPIL+ SSPEGARD+
Sbjct: 122 GEDIRLRYRFLDMRNHRVHQNIVFRSNIMSFMREKMTSLGFLELQTPILSTSSPEGARDY 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           L+PSR + G FYALPQAPQ +KQL M SGFD+YFQ+APCFRDED R+DR PGEFYQLD+E
Sbjct: 182 LIPSRKHHGKFYALPQAPQIFKQLYMVSGFDKYFQLAPCFRDEDARADRTPGEFYQLDLE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF  Q+++    E V   + E+FSN       F RI Y DA+ +YG+DKPDLRNP+ + 
Sbjct: 242 MSFATQEEVFAVAEEVFPAIIEKFSNKPFTKGPFPRITYADAMLKYGSDKPDLRNPLFII 301

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++ FV S+F+ FS     N       +P K G  ++ F   M E+A S G  GL Y+ 
Sbjct: 302 DLSDQFVGSDFKPFS-----NKTVRGIRVP-KMGEKSKTFFKSMEEYALSIGMKGLGYV- 354

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++DE  N++ +GP+ K L   + E I+ R +++ GD  +FIA        FA   R  +
Sbjct: 355 -KVDE--NMSFLGPIDKFLTDASREEIKRRAELEPGDVLYFIADSKKNAEKFAGQIRTEV 411

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A  +G+I+ + FE CWI+DFP YE +EE  K  F HNPF+MPQG +E+L   +   + A+
Sbjct: 412 ANRMGLIDNDRFEICWIVDFPMYEEDEETGKPIFTHNPFSMPQGELEALNTKNPCDVLAY 471

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E+ASG +RNH  EVM++AF   G ++E V  +FG LY AF+ G PPH G+A
Sbjct: 472 QYDVVCNGVELASGAVRNHDPEVMVKAFEIAGYTEEDVAAKFGALYSAFKFGAPPHAGMA 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
            GIDR++MLLL  +++REV  FP++ N  DLL+G+P+ V+ +QLRE+ +++ + P+ +
Sbjct: 532 FGIDRMIMLLLDEESIREVIAFPLNSNAQDLLLGAPTQVTEQQLREVHIKVRQRPQDL 589


>gi|167751119|ref|ZP_02423246.1| hypothetical protein EUBSIR_02104 [Eubacterium siraeum DSM 15702]
 gi|167655834|gb|EDR99963.1| hypothetical protein EUBSIR_02104 [Eubacterium siraeum DSM 15702]
 gi|291531791|emb|CBK97376.1| aspartyl-tRNA synthetase [Eubacterium siraeum 70/3]
 gi|291556675|emb|CBL33792.1| aspartyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 589

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 273/596 (45%), Positives = 387/596 (64%), Gaps = 15/596 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           ++YRTH+C  L  +D+G  VR++GWV  +R HGGI F+D+RDHYG  Q+    +    E 
Sbjct: 5   NKYRTHTCEMLSENDIGKTVRVAGWVENIRDHGGIKFIDLRDHYGYVQITFQKNEGLLE- 63

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGERE 119
              V  E  + I G V+ R+  T N  I TG IE+ A+ +E+L     E+LP  V    E
Sbjct: 64  --GVNKECAVTIGGTVIKRAEGTYNDKISTGTIEIVAESLEVLGKVTVEQLPFEVPTSTE 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR KYR+LDLR   +H NIV R+++I+ +R +M    F+E  TPIL+ SSPEGARD
Sbjct: 122 TKEDIRLKYRYLDLRNKRMHNNIVLRSQVISFLRSKMTEMGFLEIQTPILSTSSPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +L+PSR + G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD 
Sbjct: 182 YLIPSRKHHGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDF 241

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+F  Q+D+    E VL  VFE+F         F RI Y +++ +YGTDKPDLRNP+I+
Sbjct: 242 EMAFATQEDVFANAEEVLSAVFEKFGGKPVSPAPFKRIPYAESMLKYGTDKPDLRNPLII 301

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +++ FV S+F+ F+       G  V  + ++  G    F ++M  +A+  G  GL Y+
Sbjct: 302 TELSDLFVDSDFKPFAN--KCVRGIRVPGMASQSKG----FFEKMEAFAKEIGMKGLGYV 355

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++DES     +GP+ K LN    E ++ R  ++ GD  +FIA +      FA   R  
Sbjct: 356 --KVDESFKY--LGPIDKFLNDEQREELKNRCALEVGDVLYFIADNKKMAPKFAGQIRTE 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ + +I+ + +E C+I+DFP YE +EE  K  F HNPF+MPQGG+E+LK  + L I A
Sbjct: 412 VAKRMDMIDYDRYEMCFIVDFPMYEEDEETGKTIFTHNPFSMPQGGLEALKTKNPLDILA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG +RNH  E+M++AF   G +++ V  +FG LY AFQ G PPH G+
Sbjct: 472 YQYDIVCNGVELSSGAVRNHDLEIMIKAFEIAGYTEQDVAEKFGALYNAFQYGAPPHAGM 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR++MLL G +++REV  FPM+ N  DLL+G+P+ V+ +QLRE+ +++ + P
Sbjct: 532 APGVDRMIMLLTGDESIREVIAFPMNSNAQDLLLGAPTEVTEQQLREVHIKVRQKP 587


>gi|310642825|ref|YP_003947583.1| tRNA synthetase class ii (d k and n) [Paenibacillus polymyxa SC2]
 gi|309247775|gb|ADO57342.1| tRNA synthetase class II (D K and N) [Paenibacillus polymyxa SC2]
          Length = 569

 Score =  549 bits (1414), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 274/575 (47%), Positives = 385/575 (66%), Gaps = 18/575 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +R++GW+  +R  GGI+F+D+RDHYG+TQ+V +  +   +    +  E  + + G V  R
Sbjct: 1   MRIAGWIKNIRNLGGIVFIDLRDHYGVTQIVVSDSNELKDFVSKISRESTISVIGAVCHR 60

Query: 81  SAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
           S  TI+ ++ TG IE+ A++IE+L  V   LP  V    E  E +R KYRFLDLR + LH
Sbjct: 61  SESTISPHMKTGYIEVVAKEIEVLGKVINPLPFEVSSAHEAREDLRLKYRFLDLRNENLH 120

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
            NIV R+R+I S+R +MI  +F+E  TPILT+SSPEGARD+LVPSRV+ G FYALPQAPQ
Sbjct: 121 DNIVLRSRVIQSIRKKMIDLDFLEIQTPILTSSSPEGARDYLVPSRVHPGQFYALPQAPQ 180

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
           Q+KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD+EM+F  Q+D+ N +EN+L  
Sbjct: 181 QFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLEMAFATQEDVFNVVENMLYE 240

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           VF EF+N   +S  F RI Y +A+ +YG+DKPDLRNP+I+H+VTE F  ++F+VF     
Sbjct: 241 VFSEFTN-YKISKPFSRIPYQEAMLKYGSDKPDLRNPLIIHDVTELFTETDFKVFK---- 295

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE--SGNVAGMGPVAK 377
            N    V A P   GG  R+F D +  +A   G  GL++I +  D   SG++A   P   
Sbjct: 296 -NKTIRVIATPG-CGGQPRSFYDDIVNFAMEAGAKGLSWIKFNDDMSLSGSIAKFIPEKV 353

Query: 378 HLNIVN-TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
              ++N T+A         G + FF A +       A   R+ + + L ++  + F+FCW
Sbjct: 354 KNELMNVTQA-------GPGYALFFAADELKNVEKIAGAVRSQLGKRLDLLEKDTFKFCW 406

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I+DFP +E + +  KI+F+HNPF+MPQGGM++L   + L I A+QYD+VCNG E++SG +
Sbjct: 407 IVDFPMFELDPDTHKIEFSHNPFSMPQGGMDALLNMNPLDILAYQYDIVCNGIELSSGAV 466

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           RNH +E+M++AF   G + E +++RF  L+ AFQ G PPH GIA GIDRIVM+L    N+
Sbjct: 467 RNHDTEIMVKAFEIAGYTYEEIKSRFPALFNAFQFGPPPHAGIAPGIDRIVMILANESNI 526

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           REV  FPM+    D+LMG+PS V+ +QLR++ +++
Sbjct: 527 REVIAFPMNSKAQDVLMGAPSEVTDKQLRDVNIKL 561


>gi|46202533|ref|ZP_00208554.1| COG0173: Aspartyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 501

 Score =  548 bits (1412), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 268/504 (53%), Positives = 353/504 (70%), Gaps = 10/504 (1%)

Query: 100 KIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE 159
           +IEI S+A+ LP+ V G++EYPE +R +YRFLDLRR+ +H N++ R+R+I  +R  MI +
Sbjct: 3   EIEIQSIADVLPIQVAGDQEYPEDMRLRYRFLDLRREEVHANMMLRSRVIAYLRQAMIGQ 62

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
            F E  TPILTASSPEGARD+LVPSR++ G FYALPQAPQQ+KQLLM +GFD+YFQIAPC
Sbjct: 63  GFTEFQTPILTASSPEGARDYLVPSRIHPGKFYALPQAPQQFKQLLMVAGFDKYFQIAPC 122

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRIC 278
           FRDE  R+DR PGEFYQLD EMS+V QDD+   +E VL GVF+EF  G  V+   F RI 
Sbjct: 123 FRDEAGRADRSPGEFYQLDFEMSYVTQDDVFAAIEPVLEGVFKEFGKGRAVTPAPFPRIT 182

Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN- 337
           Y DA+ +YG+DKPDLRNPII+ +VTE F  S F +F+K+  V+ G  V AIPA G  G  
Sbjct: 183 YADAMLKYGSDKPDLRNPIIIADVTEPFRGSGFGLFAKL--VDKGSVVRAIPAPGAAGQP 240

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           R++ D++NEWAR  G  GL YI +  D        GP+AK+L     EAI+   +++DGD
Sbjct: 241 RSWFDKLNEWARENGAGGLGYIQFAAD-----GPKGPIAKNLEPARVEAIKAAANLKDGD 295

Query: 398 SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN 457
           + FF     L    FA   R  I  EL ++  + F+FCW +DFP YE NEE   ++F+HN
Sbjct: 296 AVFFACDKELPAAKFAGLVRTKIGNELDLLEKDVFKFCWTVDFPMYEINEETGLVEFSHN 355

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           PF+MPQGGM++L   D L+I A+QYD+VCNG E++SG IRNH  ++M +AF   G S   
Sbjct: 356 PFSMPQGGMDALLNQDPLTINAYQYDIVCNGVELSSGAIRNHRPDIMYKAFEIAGYSAAH 415

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
           VE  FGG+  AF+ G PPHGG A G+DRIVMLL    N+RE+ LFPM+Q   DLLM +P+
Sbjct: 416 VEEHFGGMLNAFKFGAPPHGGSAPGVDRIVMLLADQPNIREIILFPMNQQAQDLLMQAPA 475

Query: 578 TVSVEQLRELGLRI-VENPKKILK 600
            +++E+LREL +++ +  PKK +K
Sbjct: 476 EITMERLRELHIKVDLPKPKKEVK 499


>gi|254796834|ref|YP_003081671.1| aspartyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254590060|gb|ACT69422.1| aspartyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 598

 Score =  544 bits (1401), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 281/592 (47%), Positives = 385/592 (65%), Gaps = 11/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR    G++    VG  ++L+GWV R R HG I+F+D+RD YG+ Q+VA+     FE  +
Sbjct: 16  YRDCGIGEISEEHVGEVIKLAGWVFRKRDHGAILFIDLRDAYGVIQLVASESIDGFEELR 75

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V  E V+ + GLV +RS ETIN ++  G+IE+      + S A  LPL V  E  YPE 
Sbjct: 76  CVSCESVITVQGLVSARSPETINNSLQNGKIEVIVNSWSVNSHASSLPLQVDSEFPYPEE 135

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRRD L KNI+ R++II+ +R  M  E F E  TPILTA+SPEGARD++VP
Sbjct: 136 TRLRYRYLDLRRDKLKKNIILRSKIISEIRKFMEGEGFTEFQTPILTATSPEGARDYIVP 195

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+EMSF
Sbjct: 196 SRIHKGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDSRADRSPGEFYQLDVEMSF 255

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V Q+++   ME +L  +F ++SN   VS +F RI Y++++  YGTDKPDLRNPI + + T
Sbjct: 256 VGQEEVFELMERLLTHIFSKYSN-RKVSGSFERIPYEESMLLYGTDKPDLRNPIKIADFT 314

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQ-GQPGLAYIFW 361
             F  S   +F++   +  G  V  IPA   G   R F D M ++A ++    GLAY+ +
Sbjct: 315 SIFGESGLAIFAE--QIQKGAVVRGIPAPNCGNKPRKFFDEMIKYATTELCARGLAYLCF 372

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              +SG     GP+AK L+      I  +  +   D+ FF           A   R  + 
Sbjct: 373 ---DSG--IPKGPIAKFLSFEQISEIAKKACLSKDDAIFFSCDAEQAATKIAGAVRKRLG 427

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            EL +I+   ++FCWI+DFP++E +E   K+DF+HNPF+MP+GG+E+L G D L + + Q
Sbjct: 428 LELSLIDNTEYKFCWIVDFPYFELDETTGKLDFSHNPFSMPKGGLEALNG-DPLKVVSQQ 486

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+VCNG E++SG +RNH  E+M +AF  +G+ KE V   FG L  +FQ G+PPH GIA 
Sbjct: 487 YDIVCNGVELSSGAVRNHKPEIMYRAFDMLGLDKEYVNRVFGALIESFQYGVPPHAGIAP 546

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDR+VML+   +N+REV  FPM+Q   D LM +PS V  E+L E G+++VE
Sbjct: 547 GIDRMVMLIAEEENIREVIAFPMNQRCEDSLMRAPSPVETERLLECGVKLVE 598


>gi|88608344|ref|YP_506361.1| aspartyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|88600513|gb|ABD45981.1| aspartyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 588

 Score =  543 bits (1399), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 278/592 (46%), Positives = 385/592 (65%), Gaps = 11/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR    G++    +G  ++L+GWV R R HG I+F+D+RD YG+TQ+V +     FE  +
Sbjct: 6   YRDCGIGEISEEHIGKVIKLAGWVFRKRDHGAILFIDLRDAYGVTQLVISESIDGFEELR 65

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V  E V+ + GLV +RS ETIN+++  G+IE+  +   + S A  LPL V  E  YPE 
Sbjct: 66  CVSCESVITVQGLVSARSPETINSSLQNGRIEVIVKSWSVNSHASSLPLQVDSEFPYPEE 125

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR+ L KNI+ R++II+ +R  M  E F E  TPILTA+SPEGARD++VP
Sbjct: 126 TRLRYRYLDLRRNKLKKNIILRSKIISEIRRFMEDEGFTEFQTPILTATSPEGARDYIVP 185

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+EMSF
Sbjct: 186 SRIHKGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDSRADRSPGEFYQLDVEMSF 245

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V Q+++   ME +L+ +F ++SN   VS +F RI Y +++  YGTDKPDLRNPI + + T
Sbjct: 246 VGQEEVFELMEQLLKHIFSKYSN-RKVSGSFERIPYKESMLLYGTDKPDLRNPIKIADFT 304

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQ-GQPGLAYIFW 361
             F  S   VF  I  +  G  V  IPA   G   R F D M  +A ++    GLAY+ +
Sbjct: 305 SIFKESGLAVF--IEQIQKGAVVRGIPAPNCGNKPRKFFDEMIRYATTELCARGLAYLCF 362

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                 N    GP+AK L+      I  +  +  GD+ FF           A   R  + 
Sbjct: 363 -----DNGIPKGPIAKFLSSEQISEIAKKASLGKGDAIFFSCDAERAATKIAGAIRKKLG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            EL +++ + ++FCWI++FP++E +E   K+DF+HNPF+MP+GG+E+L G D L + + Q
Sbjct: 418 LELSLLDNSEYKFCWIVNFPYFELDETTGKLDFSHNPFSMPEGGLEALNG-DPLKVVSQQ 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+VCNG E++SG +RNH  E+M +AF  +G+ +E V   FG L  +FQ G+PPH GIA 
Sbjct: 477 YDIVCNGVELSSGAVRNHKPEIMYRAFEILGLDREYVNRVFGALIESFQYGVPPHAGIAP 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDR+VML+   +N+REV  FPM+Q   D LM +PS V  E+L E G+++VE
Sbjct: 537 GIDRMVMLIAEEENIREVIAFPMNQRCEDTLMRAPSPVETERLLECGVKLVE 588


>gi|291541528|emb|CBL14638.1| aspartyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 582

 Score =  540 bits (1390), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 270/593 (45%), Positives = 379/593 (63%), Gaps = 19/593 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + YRT +CG+L   ++G  VR++GWV  +R HGG++FLDIRD YG+ QVV + D    E+
Sbjct: 5   NEYRTVTCGELREENIGQQVRVAGWVENIRDHGGVMFLDIRDQYGVLQVVVHND----EL 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREY 120
            K +  E  + + G V+ R  ETIN  I TG +E+  + I++L   +  LP  V      
Sbjct: 61  LKDINKECTVTLSGTVVKRDEETINKKIATGFVEVHTEDIKVLGKCKNVLPFEVATSTNT 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLR   +H NI+ R++II  +R +M    F+E  TPIL+ SSPEGARD+
Sbjct: 121 NEEVRLKYRFLDLRNPKVHNNIMIRSQIITFLRNKMNEMGFMEIQTPILSTSSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           L+PSR ++G FYALPQAPQ +KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 181 LIPSRKHKGRFYALPQAPQIFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F  Q+D+    E VL   F++FSN       F RI Y +++ +YGTDKPDLRNP+++ 
Sbjct: 241 MAFATQEDVFAVAEEVLYETFKKFSNKEVSKPPFARIPYAESMLKYGTDKPDLRNPLVIV 300

Query: 301 NVTEHFVHSEFRVFSK--ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
            +++ F  ++F  F K  + S+N       +P   G   + F  +M E+A S G  GL Y
Sbjct: 301 EISDMFEETDFAPFRKKTVRSIN-------VPNAAGQSKKWF-KKMEEFALSIGMKGLGY 352

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  R D + +    GP+ K L   + E +  R   + GD  +FIA    +    A   R 
Sbjct: 353 VKVRDDLTFD----GPIDKFLKEGDREELISRNGSKAGDVIYFIADTAQEAPKLAGQIRT 408

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+ L +I+ + FE C+I+DFP +E +EE  KI F HNPF+MPQGG++SL   D   + 
Sbjct: 409 EVAKRLDLIDTSRFEMCFIVDFPMFERDEETNKIIFTHNPFSMPQGGLDSLLNKDPEEVL 468

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG +RNH  E+M +AF   G S++ ++ +F  LY AFQ G PPH G
Sbjct: 469 AYQYDIVCNGVELSSGAVRNHDIEIMKKAFELAGYSEDDLKAKFSALYNAFQYGAPPHAG 528

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR++MLL   +N+REV  FPM+ N  DLL+GSP  V+ +QLRE+ +++
Sbjct: 529 MAPGVDRMIMLLTEEENIREVIAFPMNSNAQDLLLGSPGEVTEQQLREVHIKL 581


>gi|213019656|ref|ZP_03335461.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212994697|gb|EEB55340.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 551

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 272/558 (48%), Positives = 380/558 (68%), Gaps = 21/558 (3%)

Query: 50  VVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE- 108
           +V N D   F+   +++SE V+ + G+V +R+ +T+N++I TG+IE+    +++ S  E 
Sbjct: 1   MVFNNDKDFFDEISNLKSESVITVTGIVKARTEDTVNSSISTGEIEVIVSNLQVESEVEF 60

Query: 109 -----------ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157
                       +   + GE+EYPE++RFKYRFLDLRR+ +  NI+ R++II+ +R  MI
Sbjct: 61  HCDEEIAKEERSILASIAGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIISELRRLMI 120

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
            + F++  TPILTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIA
Sbjct: 121 EQGFLDIQTPILTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIA 180

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           PCFRDED R+DR PGEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F RI
Sbjct: 181 PCFRDEDARADRSPGEFYQLDLEMSFVTQEDIFQVIESTLYKVFAKFSR-KSVDKDFPRI 239

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGG 336
            Y +A+ +YG+DKPDLRNP+++ +VTE F  SEF +F    ++  G  V AIPA K    
Sbjct: 240 TYKEAMLKYGSDKPDLRNPLLISDVTEIFRDSEFNIFKS--NIERGMVVRAIPAPKTAEE 297

Query: 337 NRAFCDRMNEWARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
            R+F D+  E A+ + G  GL YI +  D+ G     GP+AK L+     +I+   +++ 
Sbjct: 298 PRSFFDKKIEHAQKEFGAKGLGYITF--DKDG--IAKGPIAKFLDDNRLNSIKEITNVKP 353

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
           GDS FF +    +  + A   R  +  ELG+I+ + F+FCWI+DFP++ ++++ KKIDF 
Sbjct: 354 GDSVFFASDKENEAATIAGKVRTLLGSELGLIDDDIFKFCWIIDFPYFVYDDKSKKIDFF 413

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           HNPF+MP GG++ L+  D L I A+QYDLVCNG E++SG IRN+   +M +AF+  G SK
Sbjct: 414 HNPFSMPHGGLKDLEEKDPLDILAYQYDLVCNGIELSSGAIRNNKLNIMYRAFAIAGYSK 473

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
           E V+ +FG L RAF+ G PPHGGIA G+DR+VMLL    N+REV  FPM+Q   D+LMG+
Sbjct: 474 EEVDTKFGALVRAFRFGAPPHGGIAPGVDRMVMLLADEPNIREVICFPMNQQGEDVLMGA 533

Query: 576 PSTVSVEQLRELGLRIVE 593
           PS V  + LREL L++VE
Sbjct: 534 PSKVDDKHLRELSLKVVE 551


>gi|167567487|ref|ZP_02360403.1| aspartyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 456

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 257/452 (56%), Positives = 328/452 (72%), Gaps = 10/452 (2%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           R+ I+  +R  M    F E  TPILTASSPEGARDFLVPSR + G FYALPQAPQQ+KQL
Sbjct: 3   RSAIVAELRQAMWEAGFTEFQTPILTASSPEGARDFLVPSRTHPGKFYALPQAPQQFKQL 62

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
            M SGFDRYFQIAPCFRDED R+DR PGEFYQLD+EMSFV+Q+D+ +T+E ++RG+F++F
Sbjct: 63  AMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDIEMSFVDQEDVFSTIEPIIRGIFQKF 122

Query: 265 SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
            NG +V+  F RI Y +AIRRYG+DKPDLRNP+ + NVTE F  S FR+F+ +L  N   
Sbjct: 123 GNGFSVTEKFPRIPYGEAIRRYGSDKPDLRNPLSLRNVTETFRGSSFRLFADMLRQNAMT 182

Query: 325 EVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
           EVWAI A  GGG RAFC+++N+WAR QG+PG+AY+       G     GP+AK L+    
Sbjct: 183 EVWAIRAP-GGGTRAFCEQVNQWAREQGKPGVAYVI-----DGPSGFSGPIAKALSNDTI 236

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYE 444
            +I   L+   GDS FFIAG P  F  FA + R H+A +L +I    FEFCWI DFP YE
Sbjct: 237 SSIASELESVTGDSLFFIAGVPRDFYKFAGELRQHLATKLDLIAKQRFEFCWITDFPMYE 296

Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKG----NDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           W E+E++IDF HNPF++PQGG E+L+        L++KA+QYD+VCNG E++SG IRNH+
Sbjct: 297 WAEKEQRIDFCHNPFSLPQGGFEALEAAVTVEQQLALKAYQYDIVCNGIELSSGAIRNHV 356

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            E+M +AF   G     +E++FGG+ RA Q G PPHGGIA GIDRIVMLL GA N+R+V 
Sbjct: 357 PEIMYKAFEIAGYRPADLEDKFGGMLRALQFGAPPHGGIAPGIDRIVMLLAGASNLRDVV 416

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +FPM+Q   DL+MG+PSTV+  QL +L ++IV
Sbjct: 417 MFPMNQQGEDLMMGAPSTVAARQLTDLHIQIV 448


>gi|225027158|ref|ZP_03716350.1| hypothetical protein EUBHAL_01414 [Eubacterium hallii DSM 3353]
 gi|224955622|gb|EEG36831.1| hypothetical protein EUBHAL_01414 [Eubacterium hallii DSM 3353]
          Length = 583

 Score =  522 bits (1345), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 263/591 (44%), Positives = 377/591 (63%), Gaps = 19/591 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR  +   L   +VG  VR++GWV  +R HGG+ F+D+RD YG+ QVV   D+   E   
Sbjct: 7   YRDRTLDMLSEENVGETVRVAGWVENIRDHGGVSFIDLRDMYGVLQVVMR-DTTLLE--- 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122
            +  E  + ++G++  R  ET N  I TG IEL A K+++L  V ++LP  V   +E  E
Sbjct: 63  GINKEDCISLEGVIEHRDEETYNPKIPTGTIELEAHKVDMLGKVYKQLPFEVMTSKENHE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLR   +  N++ R+++I+ +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 123 NVRLKYRYLDLRNKKVKDNMIFRSKVISFLRQKMTDMGFLEIQTPILCASSPEGARDYIV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 183 PSRKYKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTV--SNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   FE+F+   +V  +  +  I Y  A+  +G+DKPDLRNP+ + 
Sbjct: 243 FATQEDVFRVGEEVLTATFEKFAPEGSVVTAAPYPVISYKQAMLEFGSDKPDLRNPLRIV 302

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT+ F    F+ F        G  V AI       ++ F +++ ++A S G  GL Y+ 
Sbjct: 303 DVTDFFQRCTFKPFH-------GQTVRAIKV-SNKMSKGFHEKLLKFATSIGMGGLGYLE 354

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D    ++  GP+ K +       IR    ++ GD+ FFIA    +   +A   RN +
Sbjct: 355 VKED----LSYKGPIDKFIPDDMKAEIREIASLKAGDTIFFIADKEKQAALYAGQLRNEL 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            Q L ++  N + FC+I DFP YE++EE+KKI F HNPF+MPQGG+E+L   D L + A+
Sbjct: 411 GQRLDLLEKNAYRFCFINDFPMYEYDEEQKKIIFTHNPFSMPQGGLEALTTKDPLELLAY 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G ++E ++ +FG LY AFQ G PPH G+A
Sbjct: 471 QYDIVCNGVELSSGAVRNHNLDIMVKAFEIAGYTEEDLKEKFGALYNAFQYGAPPHAGMA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR++MLL   +N+REV  FPM+ N  D++ G+P+ VS  QLRE+ +++
Sbjct: 531 PGVDRMIMLLRNEENIREVIPFPMNGNAQDVMCGAPNEVSEMQLREVHIKV 581


>gi|281418205|ref|ZP_06249225.1| aspartyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|281409607|gb|EFB39865.1| aspartyl-tRNA synthetase [Clostridium thermocellum JW20]
          Length = 581

 Score =  522 bits (1344), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 267/591 (45%), Positives = 370/591 (62%), Gaps = 19/591 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRT +   +   D+GS ++++GWV  +R HGG+ F+D+RD YG+ QVV        E  K
Sbjct: 5   YRTKTMNQITEEDIGSVLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVFR----NIEFPK 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122
            +R E  L I+G++  R  ET N  I TG IEL AQK+ +L  V  +LP  V   +E  E
Sbjct: 61  GIRKEECLSIEGVIEKRDEETYNPKIPTGTIELVAQKVTVLGRVYRDLPFEVATSKEIRE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  NI+ R+++I+ +R +M    F+E  TPIL+ASSPEGARD++V
Sbjct: 121 EVRLKYRYLDLRNRKVKDNILFRSQVISFLRQKMTEMGFVEIQTPILSASSPEGARDYIV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR ++G FYALPQAPQ YKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 181 PSRKHKGKFYALPQAPQIYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   F++F+  G  ++   F    Y  A+  +GTDKPDLRNP+ + 
Sbjct: 241 FATQEDVFRVGEEVLTATFKKFAPEGYEITEAPFPVFSYKQAMLEFGTDKPDLRNPLRII 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT+ F    F+ F          +V A  +KG      F +++ E+A S G  GL Y  
Sbjct: 301 DVTDFFQRCAFKPFHN--KTVRAIKVHADMSKG------FHEKLLEYALSIGMGGLGY-- 350

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             L+   ++   GP+ K++       +     +  GD  FFIA      C +A   RN +
Sbjct: 351 --LEVQEDMTYKGPIDKYIPQELKGELTQIARLIPGDVIFFIADKEKLACKYAGLIRNEL 408

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + L I   N + FC++ DFP YE +EE  KI+F HNPF+MPQGG+E+L   D L I A+
Sbjct: 409 GKRLDICEKNAYRFCYVNDFPMYEMDEETGKIEFTHNPFSMPQGGLEALNTKDPLDILAY 468

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G  +E ++ +FG LY AFQ G PPH G+A
Sbjct: 469 QYDIVCNGVELSSGAVRNHDLDIMVKAFEIAGYDEETLKKKFGALYNAFQYGAPPHAGMA 528

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GI+R++MLL   +N+REV  FPM+ N  DLL G+P  V+ +QLRE+ ++I
Sbjct: 529 PGIERMIMLLRNEENIREVVAFPMNSNAQDLLCGAPGEVTEQQLREVHIKI 579


>gi|218132544|ref|ZP_03461348.1| hypothetical protein BACPEC_00403 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992654|gb|EEC58656.1| hypothetical protein BACPEC_00403 [Bacteroides pectinophilus ATCC
           43243]
          Length = 591

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 261/591 (44%), Positives = 372/591 (62%), Gaps = 19/591 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR+ +   +  +D+G  ++L+GWV  +R HGG+ F+D+RD YG+ QVV        ++ K
Sbjct: 15  YRSKTMNQVSENDIGKEMKLAGWVENIRDHGGVSFVDLRDMYGVVQVVFRDT----QLLK 70

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122
            +R E  + + G++M R  ET N  I TG +EL A ++ IL  V  +LP  V   +E  E
Sbjct: 71  GIRKEQCISVAGVIMQRDEETYNPKIATGTVELEAHEVNILGKVYRDLPFEVPTSKEIRE 130

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  NI+ R+ +I  +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 131 DVRLKYRYLDLRNQKVKDNILFRSNVITYLRQKMNDMGFVEIQTPILCASSPEGARDYIV 190

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQAPQQ+KQLLMASGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 191 PSRVHKGKFYALPQAPQQFKQLLMASGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 250

Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   FE+F+  G  V+   F  I Y  A+  +G+DKPDLRNP+ + 
Sbjct: 251 FATQEDVFAVGEEVLTSTFEKFAPEGYEVTKAPFPIISYKQAMLEFGSDKPDLRNPLRII 310

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VTE F    F+ F        G  V A+       ++ F +++ ++A+S G  GL Y  
Sbjct: 311 DVTEFFQRCTFKPFH-------GKTVRALKVHANL-SKGFHEKLLKFAQSIGMKGLGY-- 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             L+ + +++  GP+ K +       +  +  +  GD  FFIA        +A   RN +
Sbjct: 361 --LEVNEDMSYKGPIDKFIPDDMKAELAQQAGLVSGDVIFFIADTEEAASKYAGQIRNEL 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
              L +I  N + FC++ DFP YE +EE K+I F HNPF+MPQGG+E+L   + L I A+
Sbjct: 419 GARLDLIEKNAYRFCYVNDFPMYELDEETKQIGFTHNPFSMPQGGLEALNTKNPLDILAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G  +E ++ +FG LY AFQ G PPH G+A
Sbjct: 479 QYDIVCNGIELSSGAVRNHDIDIMVKAFEIAGYDEETLKAKFGALYNAFQFGAPPHAGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR++MLL   +N+REV  FPM+    DL+ G+P+ VS +QLRE  +++
Sbjct: 539 PGVDRMIMLLRNEENIREVIAFPMNSTAQDLMTGAPNEVSEKQLREAHIKV 589


>gi|291520810|emb|CBK79103.1| aspartyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 583

 Score =  520 bits (1338), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/591 (45%), Positives = 371/591 (62%), Gaps = 19/591 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR+    ++  SDVG  +R++GWV  +R HGG+ F+D+RD YG+ QVV    S    I K
Sbjct: 7   YRSRILNEISESDVGKTIRVAGWVENIRDHGGVSFIDLRDMYGVLQVVLRDTSLLDGITK 66

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122
               E  + I+G++  R  ET N  I TG IEL A  I++L  V  +LP  +   +E  E
Sbjct: 67  ----ENCISIEGVIDHRDEETYNPKIPTGTIELEAHSIDMLGKVYHQLPFEIMTSKEIRE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  NI+ R+++I+ +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 123 DVRLKYRYLDLRNQKVKDNIIFRSQVISFLRQKMTEMGFLEIQTPILCASSPEGARDYIV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 183 PSRKFKGRFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+++    E VL   FE+F+    +  +  +  I Y DA+ ++G+DKPDLRNP+ + 
Sbjct: 243 FATQEEVFRVGEEVLTATFEKFAPEGASVTAAPYPVISYKDAMLQFGSDKPDLRNPLRIM 302

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VTE F    F+ F K         V A  +KG      F +++ ++A S G  GL Y+ 
Sbjct: 303 DVTEFFQRCTFKPFLK--RTVRAIRVHADMSKG------FHEKLLKFATSIGMGGLGYLE 354

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D+S      GP+ K +     +       ++ GD+ FFIA    +   FA   RN +
Sbjct: 355 VMEDKSYK----GPIDKFIPDDMKQEFAELTGLEVGDTIFFIADKEERANLFAGQLRNEL 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + L +I  N F FC++ DFP YE+N++EKK+DF HNPF+MPQGG+E+L   +   I A+
Sbjct: 411 GERLDLIEKNAFRFCFVNDFPMYEYNKDEKKMDFTHNPFSMPQGGLEALNTMNPEDILAY 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G S+E ++ +FG LY AFQ G PPH G+A
Sbjct: 471 QYDIVCNGVELSSGAVRNHDLDIMVKAFEIAGYSEEDLKTKFGALYNAFQFGAPPHAGMA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR++MLL    N+REV  FPM+ N  DL+ G+P  V+  QLRE  +++
Sbjct: 531 PGVDRMIMLLRNEDNIREVIAFPMNGNAQDLMCGAPGVVTETQLREAHIKV 581


>gi|125974053|ref|YP_001037963.1| aspartyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256004470|ref|ZP_05429450.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|125714278|gb|ABN52770.1| aspartyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255991611|gb|EEU01713.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|316941300|gb|ADU75334.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 581

 Score =  518 bits (1335), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/591 (45%), Positives = 369/591 (62%), Gaps = 19/591 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRT +   +   D+GS ++++GWV  +R HGG+ F+D+RD YG+ QVV        E  K
Sbjct: 5   YRTKTMNQITEEDIGSVLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVFR----NIEFPK 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122
            +R E  L I+G++  R  ET N  I TG IEL AQK+ +L  V  +LP  V   +E  E
Sbjct: 61  GIRKEECLSIEGVIEKRDEETYNPKIPTGTIELVAQKVTVLGRVYRDLPFEVATSKEIRE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  NI+ R+++I+ +R +M    F+E  TPIL+ASSPEGARD++V
Sbjct: 121 EVRLKYRYLDLRNRKVKDNILFRSQVISFLRQKMTEMGFVEIQTPILSASSPEGARDYIV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR ++G FYALPQAPQ YKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 181 PSRKHKGKFYALPQAPQIYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   F++F+  G  ++   F    Y  A+  +GTDKPDLRNP+ + 
Sbjct: 241 FATQEDVFRVGEEVLTATFKKFAPEGYEITEAPFPVFSYKQAMLEFGTDKPDLRNPLRII 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT+ F    F+ F          +V A  +KG      F +++ E+A S G  GL Y  
Sbjct: 301 DVTDFFQRCAFKPFHN--KTVRAIKVHADMSKG------FHEKLLEYALSIGMGGLGY-- 350

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             L+   ++   GP+ K++       +     +  GD  FFIA      C +A   RN +
Sbjct: 351 --LEVQEDMTYKGPIDKYIPQELKGELAQISGLIPGDVIFFIADKEKLACKYAGLIRNEL 408

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + L I   N + FC++ DFP YE +EE  KI+F HNPF+MPQGG+E+L     L I A+
Sbjct: 409 GKRLDICEKNAYRFCYVNDFPMYEMDEETGKIEFTHNPFSMPQGGLEALNTKGPLDILAY 468

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G  +E ++ +FG LY AFQ G PPH G+A
Sbjct: 469 QYDIVCNGVELSSGAVRNHDLDIMVKAFEIAGYDEETLKKKFGALYNAFQYGAPPHAGMA 528

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GI+R++MLL   +N+REV  FPM+ N  DLL G+P  V+ +QLRE+ ++I
Sbjct: 529 PGIERMIMLLRNEENIREVVAFPMNSNAQDLLCGAPGEVTEQQLREVHIKI 579


>gi|317470964|ref|ZP_07930343.1| aspartyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316901615|gb|EFV23550.1| aspartyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 589

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 267/591 (45%), Positives = 368/591 (62%), Gaps = 19/591 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR+ +   +  SD+GS ++++GWV  +R HGG+ F+D+RD YG+ QVV    S    +  
Sbjct: 13  YRSKTMDKISESDIGSQLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVLRDAS----LLN 68

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122
            VR E  L I+G++  R  ET N  I TG IEL A KI +L  V  +LP  V G +E  E
Sbjct: 69  EVRKEECLSIEGIIEHRDEETYNPKIPTGTIELEAHKITVLGKVYTDLPFEVSGSKEIRE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  NI  R+ +I+ +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 129 DVRLKYRYLDLRNRKVKDNIKFRSEVISFLRRKMDDLGFMEIQTPILCASSPEGARDYIV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM SG D+Y+Q+APCFRDED R+DR PGEFYQLD EMS
Sbjct: 189 PSRKYKGKFYALPQAPQQYKQLLMVSGIDKYYQVAPCFRDEDARADRSPGEFYQLDFEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   F++F+  G+ V++  F  I Y  A+  +GTDKPDLRNP+ + 
Sbjct: 249 FATQEDVFKIGEEVLAETFKKFAPEGSVVTDTPFPVISYQQAMLEFGTDKPDLRNPLRIV 308

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT+ F    F+ F          +V A  +KG      F +++ ++A+S G  GL Y+ 
Sbjct: 309 DVTDFFQRCTFKPFHD--KTVRAVKVHANLSKG------FHEKLLKFAQSIGMAGLGYLE 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D S      GP+ K +       +  +  ++ GD  FFIA      C FA   R+ +
Sbjct: 361 VKEDMSYK----GPIDKFIPEDMKSELAEKAHLEAGDVIFFIAASEKPACLFAGQIRDEL 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A  L +   N + FC+I DFP YE +EE  ++ F HNPF+MPQGG+++L   D L I A+
Sbjct: 417 AARLDLCEKNAYRFCYINDFPMYETDEETGQVTFTHNPFSMPQGGLKALNEKDPLDILAY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  +VM++AF   G  +E ++ +FG LY AFQ G PPH G+A
Sbjct: 477 QYDIVCNGVELSSGAVRNHDLDVMVKAFEVAGYDEETLKEKFGALYNAFQFGAPPHAGMA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GIDR++MLL   +N+REV  FPMS    DL+ G+P  VS  QLRE  +++
Sbjct: 537 PGIDRMIMLLRNEENIREVIAFPMSGTAQDLMCGAPGEVSELQLRETHIKV 587


>gi|167747219|ref|ZP_02419346.1| hypothetical protein ANACAC_01933 [Anaerostipes caccae DSM 14662]
 gi|167653197|gb|EDR97326.1| hypothetical protein ANACAC_01933 [Anaerostipes caccae DSM 14662]
          Length = 589

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 267/591 (45%), Positives = 368/591 (62%), Gaps = 19/591 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR+ +   +  SD+GS ++++GWV  +R HGG+ F+D+RD YG+ QVV        ++  
Sbjct: 13  YRSKTMDKISESDIGSQLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVLRD----ADLLN 68

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122
            VR E  L I+G++  R  ET N  I TG IEL A KI +L  V  +LP  V G +E  E
Sbjct: 69  EVRKEECLSIEGVIEHRDEETYNPKIPTGTIELEAHKITVLGKVYTDLPFEVSGSKEIRE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  NI  R+ +I+ +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 129 DVRLKYRYLDLRNRKVKDNIKFRSEVISFLRRKMDDLGFMEIQTPILCASSPEGARDYIV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM SG D+Y+Q+APCFRDED R+DR PGEFYQLD EMS
Sbjct: 189 PSRKYKGKFYALPQAPQQYKQLLMVSGIDKYYQVAPCFRDEDARADRSPGEFYQLDFEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   F++F+  G+ V++  F  I Y  A+  +GTDKPDLRNP+ + 
Sbjct: 249 FATQEDVFKIGEEVLAETFKKFAPEGSVVTDTPFPVISYQQAMLEFGTDKPDLRNPLRIV 308

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT+ F    F+ F          +V A  +KG      F +++ ++A+S G  GL Y+ 
Sbjct: 309 DVTDFFQRCTFKPFHD--KTVRAVKVHANLSKG------FHEKLLKFAQSIGMAGLGYLE 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D S      GP+ K +       +  +  ++ GD  FFIA      C FA   R+ +
Sbjct: 361 VKEDMSYK----GPIDKFIPEDMKSELAEKAHLEAGDVIFFIAASEKPACLFAGQIRDEL 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A  L +   N + FC+I DFP YE +EE  ++ F HNPF+MPQGG+E+L   D L I A+
Sbjct: 417 AARLDLCEKNAYRFCYINDFPMYETDEETGQVTFTHNPFSMPQGGLEALNEKDPLDILAY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  +VM++AF   G  +E ++ +FG LY AFQ G PPH G+A
Sbjct: 477 QYDIVCNGVELSSGAVRNHDLDVMVKAFEIAGYDEETLKEKFGALYHAFQFGAPPHAGMA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GIDR++MLL   +N+REV  FPMS    DL+ G+P  VS  QLRE  +++
Sbjct: 537 PGIDRMIMLLRNEENIREVIAFPMSGTAQDLMCGAPGEVSELQLRETHIKV 587


>gi|154483437|ref|ZP_02025885.1| hypothetical protein EUBVEN_01140 [Eubacterium ventriosum ATCC
           27560]
 gi|149735689|gb|EDM51575.1| hypothetical protein EUBVEN_01140 [Eubacterium ventriosum ATCC
           27560]
          Length = 598

 Score =  515 bits (1327), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 260/591 (43%), Positives = 378/591 (63%), Gaps = 19/591 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR  +  ++   +VG  VR++GW+  +R HGG+ F+D+RD YG+ QVV   D++  E   
Sbjct: 22  YRDVTMDNISEKNVGETVRIAGWIENIRDHGGVSFIDLRDMYGVMQVVMR-DTSLLE--- 77

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122
            +  E  + ++G +  R  ET N  I TG IEL A+ ++IL  V ++LP  +   +E  E
Sbjct: 78  GLNKEDCISVEGPIEHRDEETYNPKIPTGTIELEAKSVDILGKVYKQLPFEIMTSKETRE 137

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  N++ R+++I+ +R +M+   F+E  TPIL ASSPEGARD++V
Sbjct: 138 DVRLKYRYLDLRNAKVKDNMIFRSKVISYLREKMVEMGFLEIQTPILCASSPEGARDYIV 197

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 198 PSRKFKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 257

Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   F +F+  G  V+   F  I Y  A+  +G+DKPDLRNP+ + 
Sbjct: 258 FATQEDVFRVGEKVLADTFNKFAPEGYEVTQAPFPIISYKQAMLEFGSDKPDLRNPLRII 317

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F    F+ F        G  V AI       ++ F +++ ++A+S G  GL Y+ 
Sbjct: 318 DLTDFFQRCTFKPFH-------GKTVRAIKVHADM-SKGFHEKLLKFAQSIGMGGLGYLE 369

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D+S      GP+ K +     E IR    ++ GD+ FFIA +      +A   R  +
Sbjct: 370 VMEDKSYK----GPIDKFIPDDMKEEIRETAGLEVGDTIFFIADNEKNAALYAGQIRTAL 425

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + L +I  N F+FC+I DFP YE+++E KK++F HNPF+MPQGG+E+L+  D   I A+
Sbjct: 426 GERLDLIEKNSFKFCYINDFPMYEYDKETKKMEFTHNPFSMPQGGLEALETMDPEEILAY 485

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G ++E ++ +FG LY AFQ G PPH G+A
Sbjct: 486 QYDIVCNGVELSSGAVRNHDMKIMVKAFEIAGYTEEDLKEKFGALYNAFQFGAPPHAGMA 545

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR++MLL   +N+REV  FPM+ N  DL+ G+P  V+ +QLRE+ +++
Sbjct: 546 PGVDRMIMLLRDEENIREVIPFPMNGNAQDLMCGAPGEVTEQQLREVHIKV 596


>gi|160893895|ref|ZP_02074674.1| hypothetical protein CLOL250_01449 [Clostridium sp. L2-50]
 gi|156864273|gb|EDO57704.1| hypothetical protein CLOL250_01449 [Clostridium sp. L2-50]
          Length = 608

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 259/593 (43%), Positives = 374/593 (63%), Gaps = 23/593 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR  +  ++   DVG+ ++++GW+  +R HGG+ F+D+RD YG+ QVV    S    +  
Sbjct: 32  YRNRTLNEISEGDVGAELKVAGWIENIRDHGGVSFIDLRDMYGVLQVVMRDTS----LLD 87

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122
            +  E  + I G++  R  ET N  I TG IEL A  +E+L  V +++P  +   +E  E
Sbjct: 88  GLTKEDCVSISGVIEHRDEETYNPKIPTGTIELEAHSVEVLGRVYKQVPFEIMTSKETRE 147

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  N++ R+++I+ +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 148 DVRLKYRYLDLRNKKVKDNMIFRSQVISFLRQKMTEMGFLEIQTPILCASSPEGARDYIV 207

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM +GFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 208 PSRKFKGKFYALPQAPQQYKQLLMVAGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 267

Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   FE+F+  G+ V+   +  I Y  A+  +GTDKPDLRNP+ + 
Sbjct: 268 FATQEDVFKVGEEVLSATFEKFAPEGSVVTQAPYPIISYKQAMLEFGTDKPDLRNPLRII 327

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           ++T+ F    F+ F        G  V AI  P K   G     +++ ++A+S G  GL Y
Sbjct: 328 DLTDFFQRCTFKPFH-------GKTVRAINVPKKLSKGQH---EKLLKYAQSIGMGGLGY 377

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
               L+   ++   GP+ K +       I    +++ GD+ FFIA       SFA   RN
Sbjct: 378 ----LEVLDDMTYKGPIDKFIPDDMKSEIAELANLKAGDTIFFIADVEELAASFAGQLRN 433

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I   L +I  N + FC+I DFP YE+++E KKI F HNPF+MPQGG+E+L   + L + 
Sbjct: 434 EIGARLDMIEKNAYRFCYINDFPMYEYDKETKKIIFTHNPFSMPQGGLEALNEKNPLDVL 493

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG +RNH  ++M++AF   G ++E ++ +FG LY AFQ G PPH G
Sbjct: 494 AYQYDIVCNGIELSSGAVRNHDMQIMVKAFEIAGYTEEDLKTKFGALYNAFQFGAPPHAG 553

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR++MLL   +N+RE+  FPM+ N  DL+ G+P  V+ +QLRE+ +++
Sbjct: 554 MAPGVDRMIMLLRNEENIREIIPFPMNGNAQDLMCGAPGEVTEQQLREVHIKV 606


>gi|317497925|ref|ZP_07956234.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|291560551|emb|CBL39351.1| aspartyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
 gi|316894804|gb|EFV16977.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 581

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 259/593 (43%), Positives = 371/593 (62%), Gaps = 23/593 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRT +   +   D+G+ ++++GWV  +R HGG+ F+D+RD YG+ QVV    S    +  
Sbjct: 5   YRTRTMDQISEGDIGAQLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVLRDTS----LLD 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122
            VR E  L ++G++  R  ET N  I TG IEL A KI+IL  V  +LP  +   +E  E
Sbjct: 61  HVRKEECLSVEGVIQHRDEETFNPKIPTGTIELEAHKIDILGKVYRDLPFEIATSKEIRE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LD+R   +  NI+ R+++I  +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 121 DVRLKYRYLDMRNRKVKDNILFRSKVIRFLREKMEDMGFVEVQTPILCASSPEGARDYVV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM SG D+Y+QIAPCFRDED R+DR PGEFYQLD EM+
Sbjct: 181 PSRKYKGKFYALPQAPQQYKQLLMVSGIDKYYQIAPCFRDEDARADRSPGEFYQLDFEMA 240

Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNNFLRI-CYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   F++F+  G+ ++     I  Y +A+ ++G+DKPDLRNP+ + 
Sbjct: 241 FATQEDVFKIGEEVLTETFKKFAPEGSVITEAPYPIFSYKEAMLQFGSDKPDLRNPLRII 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +VT+ F    F+ F        G  V AI   AK   G     +++ ++A+S G  GL Y
Sbjct: 301 DVTDFFQRCTFKPFH-------GQTVRAINVHAKLSKGQH---EKLLKFAQSIGMGGLGY 350

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
               L+    +   GP+ K +       +     +Q+GD+ FFIA      C +A   RN
Sbjct: 351 ----LEVKEELKYKGPIDKFIPDDMKMELAEMAGLQEGDTIFFIAAPEKAACIYAGQIRN 406

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +   L ++  + + FC+I DFP YE +EE  K+ F HNPF+MPQGG+E+L   D L I 
Sbjct: 407 ELGSRLDLLEKDAYRFCYINDFPMYEIDEETGKLGFTHNPFSMPQGGLEALNEKDPLDIL 466

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG +RNH  E+M +AF   G  KE ++++FG LY AFQ G PPH G
Sbjct: 467 AYQYDIVCNGVELSSGAVRNHDMEIMEKAFDIAGYDKETLKDKFGALYNAFQFGAPPHAG 526

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR++MLL   +N+RE+  FPMS    DL+ G+P+ ++ +QLRE+ +++
Sbjct: 527 MAPGVDRMIMLLRNEENIREIIAFPMSGTAQDLMCGAPNEITEQQLREVHIKV 579


>gi|163815548|ref|ZP_02206921.1| hypothetical protein COPEUT_01713 [Coprococcus eutactus ATCC 27759]
 gi|158449185|gb|EDP26180.1| hypothetical protein COPEUT_01713 [Coprococcus eutactus ATCC 27759]
          Length = 583

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 263/591 (44%), Positives = 369/591 (62%), Gaps = 19/591 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR  +  ++   DVG  ++++GWV  +R HGG+ F+D+RD YG+ QVV    S    I K
Sbjct: 7   YRNRTMNEITEGDVGQTLKVAGWVENIRDHGGVSFIDLRDMYGVLQVVMRDTSLLDGITK 66

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122
               E  + I+G+V  R  ET N  I TG IEL A+ +EIL  V +++P  +   +E  E
Sbjct: 67  ----EDCVSIEGIVEHRDEETYNPKIPTGTIELEAKTVEILGKVYKQIPFEIQTSKETRE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  N++ R+++I+ +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 123 DVRLKYRYLDLRNKKVKDNMIFRSQVISYLRQKMTEMGFLEIQTPILCASSPEGARDYIV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 183 PSRKFKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   FE+F+    V     +  I Y  A+  +GTDKPDLRNP+ + 
Sbjct: 243 FATQEDVFKVGEEVLSATFEKFAPEGAVVTQAPYPIISYKQAMLEFGTDKPDLRNPLRII 302

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F    F+ F        G  V AI       ++   ++M ++A+S G  GL Y  
Sbjct: 303 DLTDFFQRCTFKPFH-------GKTVRAINVHKKL-SKGQHEKMLKFAQSIGMGGLGY-- 352

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             L+   +++  GP+ K +       I     +  GD+ FFIA  P    SFA   R  +
Sbjct: 353 --LEILDDMSYKGPIDKFIPDDMKGEIAELAGLTAGDTIFFIADTPEIAASFAGQIRVEL 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
              L +   N F FC+I DFP YE+++E KKI F HNPF+MPQGG+E+L   D L I A+
Sbjct: 411 GNRLDLNEKNAFRFCYINDFPMYEYDKESKKIIFTHNPFSMPQGGLEALNEKDPLDILAY 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G +++ ++ +FG LY AFQ G PPH G+A
Sbjct: 471 QYDIVCNGIELSSGAVRNHDMKIMVKAFEIAGYTEDDLKEKFGALYNAFQFGAPPHAGMA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR++MLL   +N+REV  FPM+ N  DL+ G+P  V+ +QLRE+ +++
Sbjct: 531 PGVDRMIMLLRNEENIREVIPFPMNGNAQDLMCGAPGEVTEQQLREVHIKV 581


>gi|293115523|ref|ZP_05791905.2| aspartate--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809569|gb|EFF68774.1| aspartate--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 594

 Score =  509 bits (1311), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 259/591 (43%), Positives = 368/591 (62%), Gaps = 19/591 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR  +  +L  S +G  ++++GWV  +R HGG+ F+D+RD YG+ QVV        E+ K
Sbjct: 18  YRDMTLENLDESYIGKELKVAGWVENIRDHGGVSFIDLRDMYGVLQVVIRDT----ELLK 73

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122
            ++ E  + ++GL+  R  ET N  I +G IEL A KI  L  V  +LP  +   +E  E
Sbjct: 74  GIKKEESISVEGLMEQRDEETYNPKIKSGTIELEAHKITTLGQVYTQLPFEIQTSKEVRE 133

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR + +  NI+ R+++I  +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 134 DVRLKYRYLDLRNEKVKDNILFRSKVIAYLRQKMTEMGFVEIQTPILCASSPEGARDYIV 193

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM SG D+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 194 PSRRYKGKFYALPQAPQQYKQLLMVSGIDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 253

Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   FE+F+  G  V+   +  I Y  A+  +G+DKPDLRNP+ + 
Sbjct: 254 FATQEDVFKIGEEVLTSTFEKFAPEGYEVTKAPYPIISYKQAMLEFGSDKPDLRNPLRII 313

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT+ F    F+ F        G  V AI       ++ F +++ ++A   G  GL Y+ 
Sbjct: 314 DVTDFFQKCTFKPFI-------GKTVRAIKVHANM-SKGFHEKLLKFATGIGMGGLGYL- 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G+  G  P+ K +     E  +    +  GD+ FF+A    +   FA   R  +
Sbjct: 365 -EVLEDGSYKG--PIDKFIPDELKEEFKTIAGLSTGDTIFFMADKEERAAFFAGQIRTEL 421

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +L +I  N + FC++ DFP +E + E KKI F HNPF+MPQGG+E+L   D L I A+
Sbjct: 422 GTKLDLIEKNAYRFCYVNDFPMFEKDPETKKIGFTHNPFSMPQGGLEALNTKDPLDILAY 481

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G  +EV++ +FG LY AFQ G PPH G+A
Sbjct: 482 QYDIVCNGVELSSGAVRNHDMQIMVKAFEIAGYDEEVLKAKFGALYNAFQFGAPPHAGMA 541

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR++MLL   +N+REV  FPMS    DL+ G+P+ V+ +QLRE+ +++
Sbjct: 542 PGVDRMIMLLRNEENIREVIAFPMSGTAQDLMCGAPNEVTEQQLREVHIKV 592


>gi|326201553|ref|ZP_08191424.1| aspartyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325988153|gb|EGD48978.1| aspartyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 582

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 259/591 (43%), Positives = 372/591 (62%), Gaps = 19/591 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR  +   +  SDVG  ++++GWV  +R HGG+ F+D+RD YG+ QVV        E+  
Sbjct: 7   YRNRTMDKISESDVGWGLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVMRDK----ELLA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122
            +  E  +C++G +  R  ET N  I TG IE+ AQ +E+L  V ++LP  +   +E  E
Sbjct: 63  GINKEDCICVEGKIEIRDEETYNPKIPTGTIEMEAQSVEVLGKVYKQLPFEIMTSKEIRE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  NI+ R+ +I+ +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 123 DLRLKYRYLDLRNKKVKDNIIFRSEVISFLRQKMTDMGFLEIQTPILCASSPEGARDYIV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 183 PSRKYKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+  T E VL   F++F+  G+ V+   +  ICY  A+  +GTDKPDLRNP+ + 
Sbjct: 243 FATQEDVFRTGEEVLTAAFKKFAPEGSFVTEAPYPIICYKQAMLEFGTDKPDLRNPLRIV 302

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT+ F    F+ F          +V A  +KG      F +++ E+A S G  GL Y  
Sbjct: 303 DVTDFFQRCTFKPFHN--KTVRAIKVHAEMSKG------FHEKLLEFAVSIGMGGLGY-- 352

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             L+ + ++   GP+ K +       I     +  GD+ FFIA    +    A   R  +
Sbjct: 353 --LEVNDDMTYKGPIDKFIPDDMKGEIAQIAGLNQGDTIFFIADTEDRAALLAGQIRTEL 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
              L I   N + FC++ DFP +E+++EE+KI F HNPF+MPQGG+E+L   + L I A+
Sbjct: 411 GNRLDICEKNAYRFCFVNDFPMFEYDKEEEKIIFTHNPFSMPQGGLEALNSKNPLEILAY 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G ++E ++ +FG LY AFQ G PPH G+A
Sbjct: 471 QYDIVCNGIELSSGAVRNHNLDIMVRAFEIAGYTEEDLQQKFGALYNAFQYGAPPHAGMA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR++MLL   +N+REV  FP++ N  D++  +P+ V+ +QLRE+ ++I
Sbjct: 531 PGVDRMIMLLRNEENIREVIPFPLNGNAQDMMCCAPNEVTEKQLREVHIKI 581


>gi|221632859|ref|YP_002522081.1| aspartyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221157011|gb|ACM06138.1| aspartyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 612

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 258/590 (43%), Positives = 374/590 (63%), Gaps = 5/590 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           R  +CG+L    +G  V L GWVHR R HG +IFLD+RD YGITQVVANP   SA  E+A
Sbjct: 15  RYTTCGELRRQHIGRTVTLKGWVHRRRDHGRLIFLDLRDRYGITQVVANPAHSSAAHEVA 74

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+VL + G V++R   TIN  + TG+IE+ A +IEIL+ A+  P P+  E +  E
Sbjct: 75  EHVRAEYVLAVTGQVVARPEGTINPALSTGEIEVLADQIEILNPAKTPPFPIAEETDVDE 134

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R +YR+LDLRR  L +N++ R +++  +R  +   +F+E  TP+L  S+PEGARD++V
Sbjct: 135 SLRLEYRYLDLRRARLQRNLLLRHQVVRFIRHYLEERDFVEIETPMLIKSTPEGARDYVV 194

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQQ KQLLM +GFDRY+QIA C RDED R+DR P EF Q+D+EMS
Sbjct: 195 PSRIFPGHFYALPQSPQQLKQLLMVAGFDRYYQIARCMRDEDLRADRQP-EFTQIDLEMS 253

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +D+L  +E +   +FE F++    +  F R+ Y++A+RRYG+DKPDLR  + + +V
Sbjct: 254 FVDVEDVLELIEGLYTEMFERFASKPLQAKPFPRLTYEEAMRRYGSDKPDLRFGLEIDDV 313

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +  F ++ F VF  +L+       +A+P       R+  D++ E ARS G  GL ++  +
Sbjct: 314 SSVFQNTSFGVFRSVLAEGGVIRGFAVPG-FADAPRSQLDQLTEIARSFGAKGLVWLALQ 372

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D SG +    P+AK LN      +  RL    GD    +A       +     R H+ +
Sbjct: 373 QD-SGRLIARSPIAKFLNEDEIATLAQRLQAGPGDLVLLVADAEDTAATILGRLRLHVGR 431

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E  +I+ +   FCW++D P +EWNEEE++ +  H+PFT P+     +  +D   ++A  Y
Sbjct: 432 ERKLIDESVHAFCWVIDPPLFEWNEEEQRWEAMHHPFTSPRDEDLPILDSDPSKVRAKAY 491

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV +GFE+ +G IR H  EV  + FS +G     +E RFG L RAF+ G PPHGG+A G
Sbjct: 492 DLVADGFELGTGSIRIHRREVQNKIFSIMGYDDTEIERRFGHLLRAFEYGAPPHGGMAPG 551

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR +M+L G  ++REV  FP +Q   DL++G+PS ++  QLREL LR+V
Sbjct: 552 LDRTIMILAGESSLREVIAFPKNQRAQDLMLGAPSPLAERQLRELHLRVV 601


>gi|167768598|ref|ZP_02440651.1| hypothetical protein CLOSS21_03157 [Clostridium sp. SS2/1]
 gi|167710122|gb|EDS20701.1| hypothetical protein CLOSS21_03157 [Clostridium sp. SS2/1]
          Length = 572

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 256/581 (44%), Positives = 366/581 (62%), Gaps = 23/581 (3%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D+G+ ++++GWV  +R HGG+ F+D+RD YG+ QVV    S    +   VR E  L ++G
Sbjct: 8   DIGAQLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVLRDTS----LLDHVRKEECLSVEG 63

Query: 76  LVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           ++  R  ET N  I TG IEL A KI+IL  V  +LP  +   +E  E +R KYR+LD+R
Sbjct: 64  VIQHRDEETFNPKIPTGTIELEAHKIDILGKVYRDLPFEIATSKEIREDVRLKYRYLDMR 123

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
              +  NI+ R+++I  +R +M    F+E  TPIL ASSPEGARD++VPSR  +G FYAL
Sbjct: 124 NRKVKDNILFRSKVIRFLREKMEDMGFVEVQTPILCASSPEGARDYVVPSRKYKGKFYAL 183

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           PQAPQQYKQLLM SG D+Y+QIAPCFRDED R+DR PGEFYQLD EM+F  Q+D+    E
Sbjct: 184 PQAPQQYKQLLMVSGIDKYYQIAPCFRDEDARADRSPGEFYQLDFEMAFATQEDVFKIGE 243

Query: 255 NVLRGVFEEFS-NGNTVSNNFLRI-CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            VL   F++F+  G+ ++     I  Y +A+ ++G+DKPDLRNP+ + +VT+ F    F+
Sbjct: 244 EVLTETFKKFAPEGSVITEAPYPIFSYKEAMLQFGSDKPDLRNPLRIIDVTDFFQRCTFK 303

Query: 313 VFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
            F        G  V AI   AK   G     +++ ++A+S G  GL Y    L+    + 
Sbjct: 304 PFH-------GQTVRAINVHAKLSKGQH---EKLLKFAQSIGMGGLGY----LEVKEELK 349

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
             GP+ K +       +     +Q+GD+ FFIA      C +A   RN +   L ++  +
Sbjct: 350 YKGPIDKFIPDDMKMELAEMAGLQEGDTIFFIAAPEKAACIYAGQIRNELGSRLDLLEKD 409

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
            + FC+I DFP YE +EE  K+ F HNPF+MPQGG+E+L   D L I A+QYD+VCNG E
Sbjct: 410 AYRFCYINDFPMYEIDEETGKLGFTHNPFSMPQGGLEALNEKDPLDILAYQYDIVCNGVE 469

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           ++SG +RNH  E+M +AF   G  KE ++++FG LY AFQ G PPH G+A G+DR++MLL
Sbjct: 470 LSSGAVRNHDMEIMEKAFDIAGYDKETLKDKFGALYNAFQFGAPPHAGMAPGVDRMIMLL 529

Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
              +N+RE+  FPMS    DL+ G+P+ ++ +QLRE+ +++
Sbjct: 530 RNEENIREIIAFPMSGTAQDLMCGAPNEITEQQLREVHIKV 570


>gi|238916390|ref|YP_002929907.1| aspartyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238871750|gb|ACR71460.1| aspartyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 581

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 258/591 (43%), Positives = 369/591 (62%), Gaps = 19/591 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR  +  ++  S +G  ++++GWV  +R HGG+ F+D+RD YG+ QVV   D+   +   
Sbjct: 5   YRDVNLSEVNESYIGKELKVAGWVENIRDHGGVSFIDLRDMYGVLQVVLR-DTTLLD--- 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122
            +  E  + I+G++  R  ET N  I +G IEL A+KI IL  V ++LP  V   +E  E
Sbjct: 61  GIHKEECIAIEGIMEQRDEETYNPKIPSGTIELEAKKITILGQVYQQLPFEVQTSKEVRE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  N++ R+++I  +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 121 DVRLKYRYLDLRNQKVKDNMIFRSKVIAFLRQKMTDMGFLEIQTPILCASSPEGARDYIV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 181 PSRKYKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   F +F+  G  V+   +  I Y  A+  +G+DKPDLRNP+ + 
Sbjct: 241 FATQEDVFRIGEEVLTETFAKFAPEGYEVTQAPYPIISYKQAMLEFGSDKPDLRNPLRII 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +++E F    F+ F      N       + AK   G     +++ ++A   G  GL Y+ 
Sbjct: 301 DLSEFFNKCTFKPFQ-----NKTVRAINVHAKLSKGQH---EKLLKFATGIGMGGLGYL- 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G+  G  P+ K +       I+    +Q GD+ FFIA    +   FA   RN +
Sbjct: 352 -EVLEDGSYKG--PIDKFIPEELKGEIKDLAGLQPGDTIFFIADKEDRAAYFAGQIRNEL 408

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + L +I  N + FC++ DFP +E + E KKI F HNPF+MPQGG+E+L   D L I A+
Sbjct: 409 GERLDLIEKNAYRFCYVNDFPMFERDPETKKIGFTHNPFSMPQGGLEALNTKDPLDILAY 468

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G  +EV++ +FG LY AFQ G PPH G+A
Sbjct: 469 QYDIVCNGVELSSGAVRNHDMQIMVKAFEIAGYDEEVLKAKFGALYNAFQFGAPPHAGMA 528

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR++MLL   +N+RE+  FPMS    DL+ G+P+ V+ +QLRE+ +++
Sbjct: 529 PGVDRMIMLLRNEENIREIIPFPMSGTAQDLMCGAPNEVTEQQLREVHIKV 579


>gi|167760781|ref|ZP_02432908.1| hypothetical protein CLOSCI_03166 [Clostridium scindens ATCC 35704]
 gi|167661668|gb|EDS05798.1| hypothetical protein CLOSCI_03166 [Clostridium scindens ATCC 35704]
          Length = 757

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 267/592 (45%), Positives = 371/592 (62%), Gaps = 22/592 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRT  C D+    VG  V+L+GWV  +R HGG+IF+DIRD+ G+TQ V + +    E+ K
Sbjct: 67  YRTLYCNDIREEHVGQTVQLAGWVDAIRDHGGVIFVDIRDYTGVTQTVIHNE----ELLK 122

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122
           +V  E V+ + G+V  R  +T+N  I TG +EL   ++ +L  ++  LP  V   R   +
Sbjct: 123 NVNRETVISLKGVVEKRDPDTVNEKIATGIVELVVSELVVLGKSKNMLPFDVSSSRNIKD 182

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR    H N+V R++II  +R +M  ++F+E  TPILTASSPEGARDFLV
Sbjct: 183 ELRLKYRYLDLRNPKNHDNLVMRSKIIRHLRNKMEEKDFLEIQTPILTASSPEGARDFLV 242

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EM+
Sbjct: 243 PSRKHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMA 302

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+++LN  E+V+   F  FS+       F RI Y DA+  YG+DKPDLRNP+++ ++
Sbjct: 303 FATQEEVLNICEDVIYDTFVTFSDKKVTEKPFRRITYADAMMTYGSDKPDLRNPLLICDL 362

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQPGLAYIF 360
           T  F    F  F        G  V  I A   G ++ F +   ++A S      GL YI 
Sbjct: 363 TAFFADVAFPAFR-------GKPVRGIVADCRGKSKKFFEDSLKYAMSDEVALGGLGYIT 415

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
            +    G  A  GP+AK L+      I    ++++G++ FFI  D        A   R  
Sbjct: 416 LK---EGAFA--GPIAKFLSDEKKAEITSLTNIKEGETLFFICDDKKNDAEKKAGLIRTW 470

Query: 420 IAQE--LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +A++  L +I  + FEFC+++DFP YE +EE  +  F HNPF+MPQGGM++L G D   +
Sbjct: 471 LAKKENLDLIRDDAFEFCFVVDFPMYEIDEETGETIFTHNPFSMPQGGMDALLGKDPTEV 530

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+QYDLVCNG E+ASG +RNH  ++M +AF   G  ++ ++ RF  LY AFQ G PPH 
Sbjct: 531 LAYQYDLVCNGIELASGAVRNHDIDIMKKAFEIAGYDEQELKERFNALYTAFQYGAPPHA 590

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           G+A G+DR+VMLL   + + +V  FP++ N  DLL+G+PS V+ +QL ++ L
Sbjct: 591 GMAPGVDRMVMLLTDEEKILDVIAFPLNGNAQDLLLGAPSEVTSQQLEDVHL 642


>gi|269837250|ref|YP_003319478.1| aspartyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786513|gb|ACZ38656.1| aspartyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 609

 Score =  499 bits (1286), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 258/590 (43%), Positives = 367/590 (62%), Gaps = 4/590 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R  +CG+L   DVG  V L GWV+R R HGG+IFLD+RD YGITQVVANP+ +    + A
Sbjct: 15  RYTTCGELRAGDVGRTVTLKGWVNRRRDHGGLIFLDLRDRYGITQVVANPEHSHEAHQTA 74

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VR+E+VL I G V +R A T N N+ TG IE+ A +IE+L+ A+  P  +  + E  E
Sbjct: 75  ETVRNEYVLSITGTVAARPAGTENPNMATGAIEVVADRIEVLNPAKTPPFYINEDVEVEE 134

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R ++R+LDLR+  + +N++ R R +  +R  + A +FIE  TP+L  S+PEGARD++V
Sbjct: 135 TLRLEFRYLDLRKPRMQRNLMLRHRAVKFIRDYLDARDFIEIETPVLVKSTPEGARDYVV 194

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQQ KQLLM +G DRY+QIA CFRDED R+DR P EF QLD+EMS
Sbjct: 195 PSRIYPGHFYALPQSPQQLKQLLMVAGMDRYYQIARCFRDEDQRADRQP-EFTQLDLEMS 253

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +D+L   E +   +FEE +    +   F R+ Y +AI RYGTDKPDLR  + + +V
Sbjct: 254 FVDVEDVLTLTEGLFTAMFEELATKPILQKPFPRLTYAEAILRYGTDKPDLRFGMEIADV 313

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+    SEF VFS            A+P + G  +R   D++ E A+S G  GL +I   
Sbjct: 314 TDLVADSEFGVFSNTARSGGVIRGIAVPGQAGI-SRGQIDQLTEQAQSFGAKGLVWIGLL 372

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             +  ++    P+AK L+      +  RL    GD    +A       +     R  +  
Sbjct: 373 ASDDRSLTPRSPIAKFLSEDEIRGMAERLGAGPGDLMLLVADQAPVAANVLGRLRVALGH 432

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG++N +   FCWI++ PF+EW+EE  + + AH+PFT P      +   D    +A  Y
Sbjct: 433 QLGLVNTDVHAFCWIVEMPFFEWDEENGRWEAAHHPFTSPMDEDLEILETDPGRARAKAY 492

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V +G+E+ SG IR H  +V  + F  +G  +E +E RFG L RAF+ G PPHGGIA G
Sbjct: 493 DIVLDGWELGSGSIRIHRRDVQNKIFELMGYDEEEIERRFGHLLRAFEYGAPPHGGIAPG 552

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IDR VM+L G +N+REV  FP +Q+  DL+MG+PS ++ EQL+EL + +V
Sbjct: 553 IDRTVMILAGEENIREVIAFPKNQSAQDLMMGAPSPINEEQLKELHINVV 602


>gi|255284348|ref|ZP_05348903.1| aspartate--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255265090|gb|EET58295.1| aspartate--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 581

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 259/591 (43%), Positives = 366/591 (61%), Gaps = 19/591 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR  +   +  +D+G  +R++GWV  +R HGG+ F+D+RD Y + QVV   D A  +   
Sbjct: 5   YRDVTLNQVSEADIGKELRIAGWVENIRDHGGVSFVDVRDMYAVMQVVLR-DGALLD--- 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122
            +R E  + I G+V  R  ET N  I TG IEL A +I +L  V + LP  V   RE  E
Sbjct: 61  GIRREQAVSIKGIVEKRDEETYNPKIPTGTIELEAHEITVLGGVYKNLPFEVQISREVRE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  NI+ R+++I+ +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 121 DVRLKYRYLDLRNKKVKDNIIFRSQVISFLRQKMTELGFLEIQTPILCASSPEGARDYIV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 181 PSRKFKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFS-NGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+++    E VL   FE+F+  G  V+   +  I Y  A+  +GTDKPDLRNP+ + 
Sbjct: 241 FATQEEVFKVGEEVLTATFEKFAPEGYAVTKAPYPVISYKQAMLEFGTDKPDLRNPLRII 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT+ F    F+ F        G  V AI       ++ F +R+ ++A   G  GL Y+ 
Sbjct: 301 DVTDFFQKCTFKPFL-------GRTVRAIRVH-EKMSKGFHERLLKFATGIGMGGLGYLE 352

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D+S      GP+ K +     E       +  GD+ FF+A    +   +A   R  +
Sbjct: 353 VLEDKSYK----GPIDKFIPEELKEEFAQLAGLSVGDTIFFMADKEERAAYYAGMIRTEL 408

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L ++  N + FC++ DFP +E   + K+I F HNPF+MPQGG+E+L+  + L + A+
Sbjct: 409 GEKLDLLEKNAYRFCYVNDFPMFEKEPQTKQIGFTHNPFSMPQGGLEALETMNPLDVLAY 468

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH   +M +AF   G  +EV++++FG LY AF  G PPH G+A
Sbjct: 469 QYDIVCNGVELSSGAVRNHDMRIMKKAFEIAGYDEEVLKSKFGALYNAFCFGAPPHAGMA 528

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GIDR++MLL   +N+REV  FPM+ N  DL+ G+P TV+ +QLRE+ +++
Sbjct: 529 PGIDRMLMLLKNEENIREVIAFPMNGNAEDLMCGAPGTVTEQQLREVHIKV 579


>gi|163847874|ref|YP_001635918.1| aspartyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|229470559|sp|A9WGJ7|SYD_CHLAA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|163669163|gb|ABY35529.1| aspartyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
          Length = 589

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 259/591 (43%), Positives = 365/591 (61%), Gaps = 8/591 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIA 62
           YR+H+CG+L  +  G  V L+GWVHR R HG +IF+D+RD YGITQVV N       E+A
Sbjct: 2   YRSHTCGELRPAHAGQEVTLAGWVHRRRDHGDLIFIDLRDRYGITQVVFNSAHPTAHEVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VRSE+VL + G V  R  E +N ++ TG+IEL A + ++L+ A   P+ +  E    E
Sbjct: 62  ETVRSEYVLQVRGKVRIRPPEAVNPDLATGEIELEASEAQVLNPARTPPIYIAKEGGEDE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LDLRR+ + +N++ R R++  +R  + AE F+E  TPIL  S+PEGARD+LV
Sbjct: 122 SVRLKYRYLDLRRERMQRNLILRHRVVKFIRDFLDAEGFLEIETPILIKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQ+PQQ KQLLM +G+D+YFQIA CFRDED R+DR P EF QLDMEMS
Sbjct: 182 PSRLHPGKFYALPQSPQQLKQLLMVAGYDKYFQIARCFRDEDQRADRQP-EFTQLDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+QDD+L+ +E +   +         +   F R+ Y +A+ RYG+DKPDLR  + + N+
Sbjct: 241 FVDQDDVLDLIERMFTALCRTVVPHKHLPTPFRRLSYAEAMERYGSDKPDLRYGLELVNL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++  + + F+VF  +L  N G +V  I A G    +R   D + +  R+ G  GLA+   
Sbjct: 301 SDLLIETPFQVFRNVL--NSGGQVKGIRAPGCAHFSRKQIDELTDVVRAGGAKGLAWAVL 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D  G V      AK+L      AI  R+  + GD    +A  P    +     R ++A
Sbjct: 359 PTD-GGEV--RSSFAKNLAPGEFAAIVERMQAEAGDLLLIVADQPAVVAASLDKLRRNLA 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L + + N   F WI+DFP  EWNE+E++ D  H+PFT P+     L   D   ++A  
Sbjct: 416 ERLQLADPNTLCFAWIVDFPLVEWNEDEQRWDAVHHPFTAPKDEDMHLLATDPGKVRAKA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+ NG+E   G IR H  +V  Q FS +GIS+E+ + +FG +  AF+ G PPHGGIA 
Sbjct: 476 YDLILNGYEAGGGSIRIHRRDVQQQIFSLLGISEELAQAQFGHMLEAFEYGAPPHGGIAP 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR+VM+L     +REV  FP +Q   DL+  +PS V   QL+EL +RIV
Sbjct: 536 GIDRLVMILADEPTIREVMAFPKTQQAVDLMTNAPSPVDERQLKELHIRIV 586


>gi|222525749|ref|YP_002570220.1| aspartyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|254781724|sp|B9LJ78|SYD_CHLSY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|222449628|gb|ACM53894.1| aspartyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 589

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 259/591 (43%), Positives = 364/591 (61%), Gaps = 8/591 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIA 62
           YR+H+CG+L  +  G  V L+GWVHR R HG +IF+D+RD YGITQVV N       E+A
Sbjct: 2   YRSHTCGELRPAHAGQEVTLAGWVHRRRDHGDLIFIDLRDRYGITQVVFNSAHPTAHEVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VRSE+VL + G V  R  E +N ++ TG+IEL A + ++L+ A   P+ +  E    E
Sbjct: 62  ETVRSEYVLQVRGKVRIRPPEAVNPDLATGEIELEASEAQVLNPARTPPIYIAKEGGEDE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LDLRR+ + +N++ R R++  +R  + AE F+E  TPIL  S+PEGARD+LV
Sbjct: 122 SVRLKYRYLDLRRERMQRNLILRHRVVKFIRDFLDAEGFLEIETPILIKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQ+PQQ KQLLM +G+D+YFQIA CFRDED R+DR P EF QLDMEMS
Sbjct: 182 PSRLHPGKFYALPQSPQQLKQLLMVAGYDKYFQIARCFRDEDQRADRQP-EFTQLDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+QDD+L+ +E +   +         +   F R+ Y +A+ RYG+DKPDLR  + + N+
Sbjct: 241 FVDQDDVLDLIERMFTALCRTVVPHKHLPTPFRRLSYAEAMERYGSDKPDLRYGLELVNL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++  + + F+VF  +L  N G +V  I A G    +R   D + +  R+ G  GLA+   
Sbjct: 301 SDLLIETPFQVFRNVL--NSGGQVKGIRAPGCAHFSRKQIDELTDVVRAGGAKGLAWAVL 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D  G V      AK+L      AI  R+  + GD    +A  P    +     R ++A
Sbjct: 359 PTD-GGEV--RSSFAKNLAPGEFAAIVERMQAEAGDLLLIVADQPAVVAASLDKLRRNLA 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L + + N   F WI+DFP  EWNE+E++ D  H+PFT P+     L   D   ++A  
Sbjct: 416 ERLQLADPNTLCFAWIVDFPLVEWNEDEQRWDAVHHPFTAPKDEDMHLLATDPGKVRAKA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+ NG+E   G IR H  +V  Q FS +GIS+E  + +FG +  AF+ G PPHGGIA 
Sbjct: 476 YDLILNGYEAGGGSIRIHRRDVQQQIFSLLGISEEQAQAQFGHMLEAFEYGAPPHGGIAP 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR+VM+L     +REV  FP +Q   DL+  +PS V   QL+EL +RIV
Sbjct: 536 GIDRLVMILADEPTIREVMAFPKTQQAVDLMTNAPSPVDERQLKELHIRIV 586


>gi|320160675|ref|YP_004173899.1| aspartyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319994528|dbj|BAJ63299.1| aspartyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 593

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 258/592 (43%), Positives = 361/592 (60%), Gaps = 14/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH+CG+L  + +G  V L+GWVHR R HGGI F+D+RD YGI Q+VANP      + +
Sbjct: 2   YRTHTCGELRPAHIGQTVTLAGWVHRQRDHGGITFIDLRDRYGIVQIVANPSDPKVAVIQ 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+EWVL + G+V  R     N N+ TG IE+  Q+ E+L+ A+ LP  V  + E  ES
Sbjct: 62  SARAEWVLQVKGVVRHRPEGAENPNLPTGDIEVEVQECEVLNPAKPLPFLVNKDEEVDES 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR+ + +N++ R +++  +R  +  + FIE  TPIL  ++PEGARD+LVP
Sbjct: 122 VRLKYRYLDLRRERMQRNLILRHKVVKFIRDYLDQQGFIEVETPILFKTTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQQ KQLLM SG DRYFQIA CFRDED R DR P EF QLD+EMSF
Sbjct: 182 SRVHPGMFYALPQSPQQLKQLLMVSGVDRYFQIARCFRDEDLRGDRQP-EFTQLDLEMSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           V++DD+LN +E +   +    + +   +S+ + ++ Y +A+ RYGTDKPDLR  + +H+ 
Sbjct: 241 VQRDDVLNMVEGLFTAMIPAVAPHKRLLSSPWPKLTYREAVERYGTDKPDLRFGMELHDC 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +  F +S F VF   L  N G     +        R   D +  +A+ QG  GLA +   
Sbjct: 301 SAIFANSSFMVFQNTLK-NGGVIKCIVAPSCAEYTRKEVDDLTTFAKEQGAKGLATL--- 356

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              +    G+ G   K +     EA++     + GD   FIA             R    
Sbjct: 357 ---ALTAEGVKGTAQKFITPGEVEALQALTGAKTGDLVLFIADTREVANKTLGALRLLFR 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK--GNDLLSIKA 479
             L + N +   F W++DFP +EWNEEEKK D AH+PFTMP+  ME L     D  SI +
Sbjct: 414 DRLKLANKDVLAFAWVVDFPMFEWNEEEKKWDAAHHPFTMPK--MEDLDKFDTDPASILS 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+VCNG+E+ASG IR H  ++  + F  +G+ +E ++ +FG +  AF+ G PPHGG+
Sbjct: 472 DAYDMVCNGYEMASGSIRIHRRDIQFKIFQLLGLKEEDIQRKFGHMLEAFEYGAPPHGGM 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A GIDR+VMLL    N+REV  FP +Q   DL+  +PS  + +QL+EL +R+
Sbjct: 532 APGIDRLVMLLADEPNIREVIAFPKNQAARDLMADAPSPATEKQLQELHIRV 583


>gi|219849931|ref|YP_002464364.1| aspartyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|254781723|sp|B8G6W9|SYD_CHLAD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219544190|gb|ACL25928.1| aspartyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 588

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 261/593 (44%), Positives = 368/593 (62%), Gaps = 8/593 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA- 62
           YR+H+CG+L  +  G  V L+GWVHR R HG +IF+D+RD YGITQVV N  +A      
Sbjct: 2   YRSHTCGELRPAHAGQEVTLAGWVHRRRDHGDLIFIDLRDRYGITQVVFNSANAAAHAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VRSE+VL + G V  R AE +N +I TG+IE+ A + ++L+ A   P+ +  E    E
Sbjct: 62  ETVRSEYVLQVRGKVRIRPAEAVNPDIATGEIEVDAFEAQVLNPARTPPIYIAKEAGEDE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LDLRR+ + +N++ R R++  +R  + AE FIE  TPIL  S+PEGARD+LV
Sbjct: 122 SVRLKYRYLDLRRERMQRNLILRHRVVKFIRDFLDAEGFIEIETPILIKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQ+PQQ KQLLM +G+D+YFQIA CFRDED R+DR P EF QLDMEMS
Sbjct: 182 PSRLHPGKFYALPQSPQQLKQLLMVAGYDKYFQIARCFRDEDQRADRQP-EFTQLDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+Q+D++N +E +   +    +    +   F R+ Y +A+ RYG+DKPDLR  + + N+
Sbjct: 241 FVDQEDVINLIERLFTELCRTVTPHKRLLTPFRRLTYAEAMERYGSDKPDLRYDLELVNL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++    + F+VF  +L+V  G +V  I   G G  +R   D + E ARS G  GLA+   
Sbjct: 301 SDVLAETPFQVFRSVLAV--GGQVKGIRVPGCGHFSRKQIDELTEVARSGGAKGLAWAVV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D  G+V      AK+L     +A+  R+  Q GD    +A  P+   +     R  +A
Sbjct: 359 PTD-GGDV--RSSFAKNLAPGEFDALAQRMGAQPGDLLLIVADRPVVVAASLDKLRRKLA 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             L + + +   F W++DFP  EWNEEE++ D  H+PFT P+     L   D   ++A  
Sbjct: 416 DLLQLADPDTLCFAWVVDFPLVEWNEEEQRWDAVHHPFTSPKDEDLHLLATDPGKVRAKA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+ NG+E   G IR H  +V  Q FS +GI +E  + +FG +  AF+ G PPHGGIA 
Sbjct: 476 YDLILNGYEAGGGSIRIHRRDVQQQVFSLLGIGEEKAQAQFGHMLEAFEYGAPPHGGIAP 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           GIDR+VM+L     +REV  FP +Q   DL+  +PS V   QL+EL +RIVE+
Sbjct: 536 GIDRLVMILADEPTIREVMAFPKTQQAVDLMTNAPSPVDERQLKELHIRIVED 588


>gi|225376540|ref|ZP_03753761.1| hypothetical protein ROSEINA2194_02182 [Roseburia inulinivorans DSM
           16841]
 gi|225211639|gb|EEG93993.1| hypothetical protein ROSEINA2194_02182 [Roseburia inulinivorans DSM
           16841]
          Length = 608

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 261/596 (43%), Positives = 375/596 (62%), Gaps = 20/596 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACF 59
           M + RTH+C +L +SD G  V + GW   +R     + FL +RD YG TQVV   +    
Sbjct: 22  MIQSRTHNCNELRLSDAGKNVTIVGWYENIRKVSKNLGFLILRDFYGTTQVVIETEE-MM 80

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGE 117
           ++  SV  E  + + G+V  RS++  N ++ TG+IE+  +KIEIL   +   LP  +   
Sbjct: 81  QVIDSVNKESTISVTGVVRERSSK--NKDLATGEIEVVPEKIEILGKCIYNALPFEINQS 138

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           ++  E+ R KYR+LDLR   +  NIV R++I+  +R +M + NF+E +TPILT SSPEGA
Sbjct: 139 KDADENTRLKYRYLDLRNPAVKGNIVLRSKIVAELRQKMNSLNFMEITTPILTCSSPEGA 198

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVP+R + G FYALPQAPQQ+KQ+LMASGFDRYFQIAPCFRDED R+DR PGEFYQL
Sbjct: 199 RDYLVPARNHPGKFYALPQAPQQFKQILMASGFDRYFQIAPCFRDEDARADRSPGEFYQL 258

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNP 296
           DMEM+F  Q+D+ + +E VL  VFE++    T S   F+RI Y +++ +YG+DKPDLR  
Sbjct: 259 DMEMAFASQEDVFSVVEEVLPPVFEKYGVYKTASKAPFVRIPYLESMDKYGSDKPDLRID 318

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           +++ + TE      F  F        G  V AI   G    R   D +   A  + Q   
Sbjct: 319 LVLQDATEVMADCGFGPFE-------GQTVKAIVVDGFTATRKVIDGI--CAEVEVQTAN 369

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
              +++LDE+G +  +G ++K L     EA+   L ++ GD     AG  L     A   
Sbjct: 370 KAFWFKLDENGEL--VGGISKFLQD-RKEAVIAALGLKPGDFVGLTAGKKLAAQKTAGVL 426

Query: 417 RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           R  + A     +  +C+EFCWI+DFP YE  EE  +++F HNPF+MPQGGM++L   D L
Sbjct: 427 RKLLGAASDKHMKKDCYEFCWIVDFPMYEIGEESGELEFCHNPFSMPQGGMDALNNQDPL 486

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            I A+QYDLVCNG E++SG +RNH  E+M++AF  VG+ ++ V+ +F  +Y AF  G PP
Sbjct: 487 DILAYQYDLVCNGVELSSGAVRNHDPEIMIKAFELVGLGEDDVKAKFPAMYNAFCYGAPP 546

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           H GIA G+DR++ML+ G +++RE+  FPM++N  D++MG+P+TV  +QL ++ + I
Sbjct: 547 HAGIAPGVDRMIMLICGEESIREIIPFPMNKNAMDIMMGAPATVEQKQLDDVHIAI 602


>gi|23012229|ref|ZP_00052366.1| COG0173: Aspartyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 497

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 256/498 (51%), Positives = 328/498 (65%), Gaps = 17/498 (3%)

Query: 103 ILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFI 162
           +L  A ELPLPVFG+R    +   KYRF  + R+ LH     R  II+S+R   + E  +
Sbjct: 1   MLGPAGELPLPVFGDRNIRRNA-VKYRF-SISREKLHATYEARA-IIDSLRA--MREAVL 55

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
                     SPEGARD+LVPSRV+ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRD
Sbjct: 56  RVPDADPDRVSPEGARDYLVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRD 115

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           ED R+DR PGEFYQLD+EMSFV Q+D+   +E VLRGVFEEF+ G  V+  F RI Y DA
Sbjct: 116 EDARADRSPGEFYQLDIEMSFVTQEDVFQAVEPVLRGVFEEFAEGKRVTPVFPRITYADA 175

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHS--EFRVFSKILSVNPGYEVWAIPAKGGGGN-RA 339
           + +YG DKPDLRNP+I+ +VT+ F     EF+ F  ++    G  V AIPA G  G  R+
Sbjct: 176 MLKYGVDKPDLRNPLIIADVTDEFADDAVEFKAFKGVIKA--GGVVRAIPATGAAGQPRS 233

Query: 340 FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC 399
           F D++NEWARS+G PGL YI +  +E G + G GP+AK +       I  +   + GD+ 
Sbjct: 234 FFDKLNEWARSEGAPGLGYIVFE-EEGGQLTGKGPIAKFIPAAIQARIAEKAGAKAGDAV 292

Query: 400 FFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF 459
           F  AG   K  + A  AR  I  EL + + + F FCW++DFP YEWNEEEK+IDF+HNPF
Sbjct: 293 FLSAGPEAKAAALAGKARIRIGDELKLSDTDQFAFCWVVDFPMYEWNEEEKRIDFSHNPF 352

Query: 460 TMPQGGMESL------KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
           +MP    +            +L IKAFQYD+VCNG E++SG IRNH  +VM +AFS  G 
Sbjct: 353 SMPNFDRDEFLALGEGDAEKILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFSIAGY 412

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLM 573
            K+V+E +FGG+  A + G PPHGGIA G+DRIVMLL    N+REV LFPM+Q   DL+M
Sbjct: 413 GKDVLEEKFGGMLNALRLGAPPHGGIAPGVDRIVMLLCHEPNIREVVLFPMNQRAEDLMM 472

Query: 574 GSPSTVSVEQLRELGLRI 591
           G+P+  + +QLREL +R+
Sbjct: 473 GAPAEATPKQLRELHIRL 490


>gi|269926066|ref|YP_003322689.1| aspartyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789726|gb|ACZ41867.1| aspartyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 603

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 252/589 (42%), Positives = 365/589 (61%), Gaps = 5/589 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           +T +CG+L    +G  V L GWV+  R HGG+IF+DIRD +GITQVV +PD+   F +A+
Sbjct: 3   KTWTCGELNTKHIGQEVTLYGWVNSRRDHGGVIFIDIRDRWGITQVVFSPDNQDAFRLAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +VRSEWV+ + G V  R   T N  + TG+IEL+A ++E+L+ +  LP  +  +    E+
Sbjct: 63  TVRSEWVISVTGTVRRRPPGTENPRMSTGEIELAASRLEVLNKSAPLPFDLDDDNLPDET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR+LDLRR  + +N+  R ++   +R  + A +FIE  TPIL  S+PEGARD+LVP
Sbjct: 123 VRLQYRYLDLRRPKMLRNLQLRHKVTKFIRDYLTARDFIEIETPILIKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+  G FYALPQ+PQQ KQLLM +G +RYFQIA CFRDED R+DR P EF QLD+EMSF
Sbjct: 183 SRLYPGHFYALPQSPQQLKQLLMVAGVERYFQIARCFRDEDLRADRQP-EFTQLDLEMSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V Q+DIL   E++   + EE ++   +   F RI Y+++  +YGTDKPD+R  + + +++
Sbjct: 242 VTQEDILQLTEDLFTSLTEELTDKKILYKPFKRISYEESWNKYGTDKPDIRYGMEISDIS 301

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   +++FRVF   L+       +A+P       R   D  N  ARS G  GL + F   
Sbjct: 302 DIVANTDFRVFKDTLAAGGTVRGFAVPEAASFTRRQLDDLTN-LARSFGAKGLVW-FAID 359

Query: 364 DESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           D +  V G+  PV K  +     AI  +L   +GD    +A   L+        R+H+A 
Sbjct: 360 DLARGVEGVRSPVTKFFSDDQVVAIAHKLGANNGDLMLIVADKTLQALDVLGRLRSHMAH 419

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+++ +   + +I+D P +EWNE+E + D  H+PFT P    E L  +D   ++A  Y
Sbjct: 420 ELGLVDQDVIAYAFIVDPPLFEWNEDEGRWDPTHHPFTAPYPEDEPLLDSDPGKVRAMAY 479

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+VCNG+E+ SG IR H  ++  + F  +  + E +E RFG L +AF+ G PPHGGIA G
Sbjct: 480 DIVCNGYELGSGSIRIHKRDLQAKIFEILNYTPEDIEQRFGPLLKAFEYGAPPHGGIAPG 539

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IDR+VM+L    N+REV  FP +Q   DL++ +PS V  EQLREL + +
Sbjct: 540 IDRLVMVLADEPNIREVIAFPKNQAGVDLMLNAPSPVDEEQLRELHIEV 588


>gi|255505602|ref|ZP_05347140.3| aspartate--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255266878|gb|EET60083.1| aspartate--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 593

 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 262/598 (43%), Positives = 376/598 (62%), Gaps = 21/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH+CG L + DVG+ V++ GW   +R     + FL +RD+YG+TQVV   +     I  
Sbjct: 8   RTHTCGALRLGDVGAQVKIVGWFDNLRKVSKNLGFLILRDYYGVTQVVIETEE-MMNIVD 66

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYP 121
            +  E  + + G V  RS++  NA + TG+IE+  +KIE+L      ELP  +   +E  
Sbjct: 67  GINYESTISVCGTVRERSSK--NAALPTGEIEVVPEKIELLGKCRYNELPFQIARSKEAD 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R KYR+LDLR   +   I  R++I+  +R  MIA +F+E +TPILT SSPEGARD+L
Sbjct: 125 ENTRLKYRYLDLRNPAVKDKITLRSKIVADLRASMIAHDFLEITTPILTCSSPEGARDYL 184

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR + G FYALPQAPQQ+KQLLMASGFDRYFQIAPCFRDED R+DR PGEFYQLDMEM
Sbjct: 185 VPSRNHPGKFYALPQAPQQFKQLLMASGFDRYFQIAPCFRDEDARADRSPGEFYQLDMEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +F +Q+D+   +E+VL  +F ++   +T S   F RI Y +A+ +YGTDKPDLR  +++ 
Sbjct: 245 AFADQEDVFAILEDVLPPIFAKYGVYHTASAAPFKRISYLEAMEQYGTDKPDLRIDLLVQ 304

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           + T       F  F+       G  V A+   G  G R   D++   A  + Q G    +
Sbjct: 305 DATACMADCGFGPFA-------GQTVKAVVVSGFEGTRKVIDKL--CADVEVQSGNKAYW 355

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +++D +G+ A  G ++K L     +     L ++ GD     AG        A   R  +
Sbjct: 356 FKVDANGDFA--GGISKFLQERKAQVTEA-LGLKPGDFIGLSAGKKSAAQKTAGVLRKML 412

Query: 421 AQEL-GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
                  +  + +EFCWI+DFP YE  EE  +++F HNPF+MPQGGM++L+  + L I A
Sbjct: 413 GAACPAHMKTDRYEFCWIVDFPMYEIGEESGELEFCHNPFSMPQGGMKALEEQEPLEILA 472

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYDLVCNG E++SG +RNH  E+M++AF+ VG+ ++ V+ +F  +Y AF  G PPH GI
Sbjct: 473 YQYDLVCNGVELSSGAVRNHDPEIMVKAFNLVGLGEDDVKAKFPAMYNAFCYGAPPHAGI 532

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VML+ G +++RE+  FPM++N  D++MG+P+TV  +QL ++ +RI E PKK
Sbjct: 533 APGVDRMVMLIAGEESIREIIPFPMNKNAQDVMMGAPATVEPKQLEDVHIRI-EMPKK 589


>gi|108804189|ref|YP_644126.1| aspartyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|123368172|sp|Q1AWB4|SYD_RUBXD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|108765432|gb|ABG04314.1| aspartyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 600

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 262/597 (43%), Positives = 366/597 (61%), Gaps = 12/597 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIA 62
           YRTH+ G+L  S+VG  VRL+GWVHR R HGG+IF+D+RD +GITQV  +P+    F  A
Sbjct: 9   YRTHTAGELRASNVGQRVRLAGWVHRRRDHGGLIFVDLRDRWGITQVTFDPERGEVFSAA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +R EW + ++G V+ R     N  + TG+IE+ A  + +L+ +E  P  +  ER   E
Sbjct: 69  ERLRPEWSVSVEGEVVRRPEGNENPELPTGEIEVEASSLRVLNASETPPFEIDRERPVDE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R +YR+LDLRR+ + +NI+ R R++  +R  +   +F+E  TP+LT S+PEGARD+LV
Sbjct: 129 LTRLRYRYLDLRRERMRENILFRDRVVRYIRRYLAERDFVEVETPLLTKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQQ+KQLLM +G +RYFQIA   RDED R DR P E  QLD+EMS
Sbjct: 189 PSRLYPGQFYALPQSPQQFKQLLMVAGLERYFQIARALRDEDQRGDRQP-EHTQLDLEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           +  QD++L  +E +   + E  +    +   F R+ Y +A+ R+G+DKPDLR  + + +V
Sbjct: 248 YTTQDEVLQLIEGLYTEIVERLTEKRVLFKPFPRLTYAEAMERFGSDKPDLRFGLELRDV 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++    SEF+VF    +V  G  V  + A G G  +R   D + E AR  G  GLA++  
Sbjct: 308 SDLARSSEFKVFRN--AVEAGGSVRGLAAGGLGDLSRRELDGLTEVAREGGARGLAHL-- 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
               +   A  GPVAK  +     A+R  L  + GD  FF+A  DP+ F S       H+
Sbjct: 364 ---RAEGKALKGPVAKFFSAEEQAALREALGARPGDWMFFVADRDPVVFESLNRLR-LHL 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
              LG+ + +   FCWI DFP +E+NEEE +I+  H+ FTMP+     L   D L++   
Sbjct: 420 RDRLGLADRDALAFCWITDFPLFEYNEEEGRIEPMHHMFTMPREEDIPLLDTDPLAVTGQ 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+ASG IR H  ++  + FS +GI +E  E RFG L RAF+ G PPHGGIA
Sbjct: 480 LYDLVANGVELASGSIRIHRPDLQQKVFSIIGIDEEEAERRFGTLLRAFRYGAPPHGGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDR+VMLL    N+REV  FP +Q   D +M +PS VS EQLREL + +   P++
Sbjct: 540 PGIDRLVMLLRDEPNIREVMAFPKTQAARDEMMDAPSPVSEEQLRELHISLCLPPEE 596


>gi|302875937|ref|YP_003844570.1| tRNA synthetase class II (D K and N) [Clostridium cellulovorans
           743B]
 gi|307686566|ref|ZP_07629012.1| tRNA synthetase class II (D K and N) [Clostridium cellulovorans
           743B]
 gi|302578794|gb|ADL52806.1| tRNA synthetase class II (D K and N) [Clostridium cellulovorans
           743B]
          Length = 588

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 262/605 (43%), Positives = 373/605 (61%), Gaps = 38/605 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACF 59
           M + RTH+C +L +S+VG  V + GW   +R     + FL +RD+YG+TQVV   +    
Sbjct: 1   MIQSRTHTCNELKMSNVGECVIIVGWYENIRRVSKNLGFLQLRDYYGVTQVVIETEEM-M 59

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGE 117
           +I  SV +E  L I+G+V  R+++  NA + TG IE+  +KI IL   +   LP  +   
Sbjct: 60  DIVDSVNNESTLSIEGVVRERTSK--NATLATGDIEIVPEKITILGKCQYNALPFEINQS 117

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           +E  E+ R KYR+LDLR   + + I+ R++I+  +R RM    F+E +TPILT SSPEGA
Sbjct: 118 KEADENTRLKYRYLDLRNPNVKEKIILRSKIVADLRNRMNELGFLEINTPILTCSSPEGA 177

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSR   G FYALPQAPQQ+KQ+LMASGFDRYFQIAPCFRDED R+DR PGEFYQL
Sbjct: 178 RDYLVPSRNFPGKFYALPQAPQQFKQILMASGFDRYFQIAPCFRDEDARADRSPGEFYQL 237

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNP 296
           DMEM+F  Q+D+ + +E VL  VFE++    T S   F  I Y  A+  YG+DKPDLR  
Sbjct: 238 DMEMAFASQEDVFSIVEEVLPPVFEKYGVYKTASKAPFKHIQYTTAMEVYGSDKPDLRID 297

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           +++ + TE      F  F   +       V AI        R   D++   A  + Q G 
Sbjct: 298 LLIQDATEVMADCGFGPFENQV-------VKAIVVDKFNATRKVIDKI--CADVEVQTGN 348

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL--------- 407
              +++LDE+  +  +G ++K L +   E +   L ++ GD     AG  L         
Sbjct: 349 KAFWFKLDENNEL--VGGISKFL-VDKKEQVIEALGLKPGDFVGLTAGKKLVAQKTAGVL 405

Query: 408 -KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
            K   +A++   H+ Q       +C+EFCWI+DFP YE  EE  K++F HNPF+MPQGGM
Sbjct: 406 RKLLGYASET--HMKQ-------DCYEFCWIVDFPMYEIGEESGKLEFCHNPFSMPQGGM 456

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
           ++L   D   I A+QYDLVCNG E++SG +RNH  E+M++AF  VG+ +E V+ +F  +Y
Sbjct: 457 DALMNEDPEKILAYQYDLVCNGVELSSGAVRNHDPEIMIKAFELVGLGEEDVKAKFPAMY 516

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            AF  G PPH GIA G+DR++ML+ G +++RE+  FPM++N  D++MG+PS V  +QL +
Sbjct: 517 NAFCYGAPPHAGIAPGVDRMIMLITGEESIREIIPFPMNKNAMDVMMGAPSEVEQKQLED 576

Query: 587 LGLRI 591
           + ++I
Sbjct: 577 VHIKI 581


>gi|291518707|emb|CBK73928.1| aspartyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 587

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 260/597 (43%), Positives = 369/597 (61%), Gaps = 20/597 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACF 59
           M + RTH+C +L +SD G  V L GW   +R     + F+ +RD YG TQ+V   +    
Sbjct: 1   MTQSRTHNCNELRLSDAGKQVTLVGWFENIRKVSKNLGFVILRDFYGTTQIVIETEE-MM 59

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGE 117
            +  SV  E  + + G V  RS++  N  + TG+IE+    IEIL      ELP  +   
Sbjct: 60  AVIDSVNKESTIQVTGEVRERSSK--NTELPTGEIEVVPTSIEILGKCTHNELPFEINRS 117

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           +E  E+ R KYR+LDLR   +   I+ R++I+  +R  MIA +F+E +TPILT SSPEGA
Sbjct: 118 KEADENTRLKYRYLDLRNPEVKSKIILRSKIVAELRASMIAHDFMEITTPILTCSSPEGA 177

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVP+R + G FYALPQAPQQ+KQ+LMASGFDRYFQIAPCFRDED R+DR PGEFYQL
Sbjct: 178 RDYLVPARNHPGKFYALPQAPQQFKQILMASGFDRYFQIAPCFRDEDARADRSPGEFYQL 237

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNP 296
           DMEM+F  Q+DI   +E+VL  +F ++   NT S   F+RI Y +++ +YG+DKPDLR  
Sbjct: 238 DMEMAFASQEDIFAVVEDVLPPIFAKYGVYNTASTAPFVRIPYLESMDKYGSDKPDLRID 297

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           +++ + T+      F  F        G  V AI        R   D M   A  +     
Sbjct: 298 LVLQDATDVMADCGFGPFE-------GNVVKAIVVDNLTATRKQIDAM--IAEVEVATAQ 348

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
              +++LDE+G +  +G +AK L     +A+   L ++ GD     AG  L     A   
Sbjct: 349 KTYWFKLDENGEL--VGGIAKFLQ-ERKQAVIDALSLKPGDFVGLAAGPLLVAQKTAGVF 405

Query: 417 RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           R  + A   G +  + +EFCWI+DFP YE  EE  +++F HNPF+MPQGGM++LK  + L
Sbjct: 406 RKLLGAAAEGHMKKDTYEFCWIVDFPMYEIGEESGELEFCHNPFSMPQGGMDALKNKEPL 465

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            I A+QYDLVCNG E++SG IRNH  E+M++AF  VG+ ++ V+ +F  +Y AF  G PP
Sbjct: 466 DILAYQYDLVCNGVELSSGAIRNHDPEIMIEAFKLVGLGEDDVKAKFPAMYNAFTYGAPP 525

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           HGGIA G+DR++ML+ G +++RE+  FPM++N  D++M +P+TV  +QL ++ + IV
Sbjct: 526 HGGIAPGVDRMIMLIAGEESIREIIPFPMNKNAQDIMMDAPATVDQKQLDDVHIAIV 582


>gi|260437931|ref|ZP_05791747.1| aspartate--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809682|gb|EFF68887.1| aspartate--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 587

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 257/598 (42%), Positives = 370/598 (61%), Gaps = 20/598 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACF 59
           M + RTH+CG+L ++D G  V + GW   +R     + FL +RD YG TQVV   +    
Sbjct: 1   MVQSRTHNCGELRLADAGKDVTVVGWYENIRKVSKNLGFLILRDFYGTTQVVIETED-MM 59

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGE 117
            +  SV  E  + + G+V  RS++  NA + TG+IE+   KIE+L       LP  +   
Sbjct: 60  SVIDSVNKESTIQVTGVVRERSSK--NAELPTGEIEVVPSKIEVLGKCRYNALPFEINQS 117

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           ++  E+ R KYR+LDLR   +  NI+ R++I+  +R +M +  F+E +TPILT SSPEGA
Sbjct: 118 KDADENTRLKYRYLDLRNPAVKGNIILRSKIVAELRNKMNSLGFMEITTPILTCSSPEGA 177

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVP+R + G FYALPQAPQQ+KQ+LMASGFDRYFQIAPCFRDED R+DR PGEFYQL
Sbjct: 178 RDYLVPARNHPGKFYALPQAPQQFKQILMASGFDRYFQIAPCFRDEDARADRSPGEFYQL 237

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           DMEM+F  Q+D+ + +E VL  VF ++    N     F+RI Y +++ +YGTDKPDLR  
Sbjct: 238 DMEMAFASQEDVFSVIEEVLPPVFAKYGVYSNASKAPFVRIPYLESMDKYGTDKPDLRID 297

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           +++ + TE      F  F        G  V AI   G    R   D +   A  +     
Sbjct: 298 LVLTDATELLSGCGFGPFE-------GQTVKAIVVDGFTATRKQIDAI--CADVEVATAN 348

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
              ++++DE+G +   G +AK L  +  + I   L ++ GD     AG  L     A   
Sbjct: 349 KAYWFKVDENGEIT--GGIAKFLQNIKEQVINT-LGLKPGDFVGLTAGKKLVAQKTAGVL 405

Query: 417 RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           R  + A     +  N +EFCWI+DFP YE  EE  +++F HNPF+MPQGGM++LK  + L
Sbjct: 406 RRLLGAASEKHMKQNTYEFCWIVDFPMYEIGEESGELEFCHNPFSMPQGGMDALKNKEPL 465

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            I A+QYDLVCNG E++SG +RNH  E+M++AF  VG+ ++ V+ +F  +Y AF  G PP
Sbjct: 466 DILAYQYDLVCNGVELSSGAVRNHDPEIMIEAFRLVGLGEDDVKAKFPAMYNAFCYGAPP 525

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           H GIA G+DR++ML+ G +++RE+  FPM++N  D++MG+P+TV  +QL ++ + IV+
Sbjct: 526 HAGIAPGVDRMIMLICGEESIREIIPFPMNKNAMDVMMGAPATVDQKQLDDVHIAIVK 583


>gi|58697338|ref|ZP_00372686.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58536284|gb|EAL59797.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 501

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 244/508 (48%), Positives = 340/508 (66%), Gaps = 21/508 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+ Y+TH+C +L  +DV   V LSGW++R R HG +IF+D+RD YGITQ+V N D   F+
Sbjct: 1   MNCYKTHTCNELRKNDVEKEVTLSGWLYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE------------ 108
              +++ E V+ + G+V +R+ +T+N++I TG+IE+    + + S  E            
Sbjct: 61  EISNLKLESVITVTGIVEARTEDTVNSSISTGEIEVIVNNLRVESEVEFHFDEEIAKEER 120

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
            +   + GE+EYPE++RFKYRFLDLRR+ +  NI+ R++II  +R  MI   F+E  TPI
Sbjct: 121 SILASITGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIIAELRKLMIERGFLEIQTPI 180

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D
Sbjct: 181 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARAD 240

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           R PGEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F RI Y +A+ +YG+
Sbjct: 241 RSPGEFYQLDLEMSFVTQEDIFQIIESTLYRVFAKFSR-KSVDKDFPRITYKEAMLKYGS 299

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
           DKPDLRNP+++ +VTE F  S F +F    ++  G  V AIPA K     R+F D+  E 
Sbjct: 300 DKPDLRNPLLISDVTEIFRDSGFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEH 357

Query: 348 ARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406
           A+ + G  GL YI +  D+ G     GP+AK L+      IR   +++ GDS FF +   
Sbjct: 358 AQKEFGAKGLGYITF--DKDG--TAKGPIAKFLDENRLNHIREATNIEPGDSVFFASDKE 413

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
            +  + A   R  +  EL +I+ N F+FCWI+DFP++ ++++ KKIDF HNPF+MP GG+
Sbjct: 414 NEAANIAGKVRTLLGSELSLIDDNIFKFCWIIDFPYFVYDDKSKKIDFFHNPFSMPHGGL 473

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASG 494
           + L+  + L I A+QYDLVCNG E++SG
Sbjct: 474 KDLEDKNPLDILAYQYDLVCNGIELSSG 501


>gi|329926805|ref|ZP_08281213.1| aspartate--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328939005|gb|EGG35373.1| aspartate--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 592

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/594 (42%), Positives = 362/594 (60%), Gaps = 12/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG L  +++G  V L+GWV   R  GG++F+D+RD  GI Q+V NPD       +A
Sbjct: 3   RTHHCGHLTTANIGETVTLNGWVQTRRDLGGVLFIDLRDRSGIMQIVFNPDFSGEALAVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VRSE+V+ + G V+ R  ET N N+ TG+IE+    IE+L+ A+  P  +    E  E
Sbjct: 63  DKVRSEFVVAVSGKVVKRDPETFNPNLPTGEIEVQVTSIEVLNAAKTPPFFIEDGVEVDE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + K ++ R++     R  +  E F++  TPILT SSPEGARD+LV
Sbjct: 123 QLRLKYRYLDLRRPEMQKTLMLRSKASKVFRDFLDDEGFVDVETPILTKSSPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G F+ALPQ+PQ YKQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVHAGEFFALPQSPQIYKQLLMVSGLERYYQIARCFRDEDLRADRQP-EFTQVDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++D+LN ME ++  +F+E + G  ++  F RI Y DA+ +YG+DKPDLR  + +  +
Sbjct: 242 FMDREDLLNMMEQLMVKLFKE-TIGVELATPFQRISYADAMGKYGSDKPDLRFGMELIEM 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            +    S  +VFS +  +  G EV  + AKG G   R   D +  +A   G  GLA+I  
Sbjct: 301 NDIVASSGVKVFSSV--IEKGGEVKCLNAKGCGTWTRKEIDDLGPYAARYGAKGLAWIQV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +  E       GP+ K  +    EA+R R   +DGD   F A +           R  I 
Sbjct: 359 KEGEF-----KGPIVKFFSEQEIEAVRERTGAEDGDLLLFSADNKKVVADVLGALRLKIG 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++LG+IN N ++F W++DFP + ++EE K+    H+PFT P+     L   D L+++A  
Sbjct: 414 RQLGLINDNEYKFAWVLDFPLFSYDEEAKRYVAEHHPFTRPKDEDLELMDTDPLAVRAEA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  E+  + F+ +G+S EV  ++FG L  AF+ G PPHGGIA 
Sbjct: 474 YDIVLNGYEVGGGSMRIYKREIQEKMFAALGMSPEVAHDKFGYLMDAFEYGTPPHGGIAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR+VMLL G  N+RE   FP + +  DLLM +PS V   QL +L +++ + P
Sbjct: 534 GLDRLVMLLAGRTNLRETIAFPKTASATDLLMDAPSQVDGGQLEQLHIKLAKKP 587


>gi|261405429|ref|YP_003241670.1| aspartyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261281892|gb|ACX63863.1| aspartyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 592

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/594 (42%), Positives = 362/594 (60%), Gaps = 12/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG L  +++G  V L+GWV   R  GG++F+D+RD  GI Q+V NPD       +A
Sbjct: 3   RTHHCGHLTTANIGETVTLNGWVQTRRDLGGVLFIDLRDRSGIMQIVFNPDFSGEALAVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VRSE+V+ + G V+ R  ET N N+ TG+IE+    IE+L+ A+  P  +    E  E
Sbjct: 63  DKVRSEFVVAVSGKVVKRDPETFNPNLPTGEIEVQVTSIEVLNAAKTPPFFIEDGVEVDE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + K ++ R++     R  +  E F++  TPILT SSPEGARD+LV
Sbjct: 123 QLRLKYRYLDLRRPEMQKTLMLRSKASKVFRDFLDDEGFVDVETPILTKSSPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G F+ALPQ+PQ YKQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVHAGEFFALPQSPQIYKQLLMVSGLERYYQIARCFRDEDLRADRQP-EFTQVDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++D+LN ME ++  +F+E + G  ++  F RI Y DA+ +YG+DKPDLR  + +  +
Sbjct: 242 FMDREDLLNMMEQLMVKLFKE-TIGVELATPFQRISYADAMGKYGSDKPDLRFGMELIEM 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            +    S  +VFS +  +  G EV  + AKG G   R   D +  +A   G  GLA+I  
Sbjct: 301 NDIVASSGVKVFSSV--IEKGGEVKCLNAKGCGTWTRKEIDDLGPYAARYGAKGLAWIQV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +  E       GP+ K  +    EA+R R   +DGD   F A +           R  I 
Sbjct: 359 KEGEF-----KGPIVKFFSEQEIEAVRERTGAEDGDLLLFSADNKKVVADVLGALRLKIG 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++LG+IN N ++F W++DFP + ++EE K+    H+PFT P+     L   D L+++A  
Sbjct: 414 RQLGLINDNEYKFAWVLDFPLFSYDEEAKRYVAEHHPFTRPKDEDLGLMDTDPLAVRAEA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  E+  + F+ +G+S EV  ++FG L  AF+ G PPHGGIA 
Sbjct: 474 YDIVLNGYEVGGGSMRIYKREIQEKMFAALGMSPEVAHDKFGYLMDAFEYGTPPHGGIAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR+VMLL G  N+RE   FP + +  DLLM +PS V   QL +L +++ + P
Sbjct: 534 GLDRLVMLLAGRTNLRETIAFPKTASATDLLMDAPSQVDGGQLEQLHIKLAKKP 587


>gi|302391508|ref|YP_003827328.1| aspartyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203585|gb|ADL12263.1| aspartyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 596

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 251/597 (42%), Positives = 371/597 (62%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R + CG+L   ++   V L GWV R R HGG+IF+D+RD +G+ QVV +P  A   FE A
Sbjct: 9   RDYYCGELSSEEIDEEVTLMGWVQRRRDHGGLIFVDLRDRFGLVQVVFSPQEAKEAFEKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +R E+V+ + G V  R   TIN  + TG+IE++ ++IEILS A+  PL +  + E  E
Sbjct: 69  EDLRKEYVIAVTGKVARRPEGTINPELATGEIEVNVKEIEILSEADTPPLQIAEDSEVGE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + +NI+ R ++  ++R  +  E+F+E  TP+LT S+PEGARD+LV
Sbjct: 129 DLRLKYRYLDLRRPNMQENIILRHQVKKAVRNYLDEEDFLEIETPMLTKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQ+PQ +KQLLM SG +RY+QI  CFRDED R+DR P EF Q+DMEMS
Sbjct: 189 PSRVHRGKFYALPQSPQLFKQLLMVSGMERYYQITRCFRDEDLRADRQP-EFTQIDMEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++DD+++ +E +++ +F   + G     +F  + Y +A+ R+GTD+PDLR  + + +V
Sbjct: 248 FVDEDDVISLVEGMIQEIFA--TAGLEEPTDFAHMSYQEAMDRFGTDRPDLRFGLELVDV 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           +E    SEF VFS   ++  G EV  I AKG    +R   D + ++  + G  GLA+I  
Sbjct: 306 SEIVEDSEFNVFSG--TIADGGEVKGINAKGCADFSRKDLDDLTDYVGNYGAQGLAWIAL 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R D         P++K L+    E I+  ++ ++GD   F+A  P    +     R  +A
Sbjct: 364 RED-----GISSPISKFLSDEELEEIQNEMEAEEGDLLLFVADRPKVVAAALGHLRLKLA 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           Q L +I+ + F F WI DFP  E +E+E ++   H+PFT PQ     L  +    +KA  
Sbjct: 419 QRLDLIDQDEFNFVWITDFPLLERDEDEDRLVSLHHPFTAPQDEDIDLLDSKPTEVKAKA 478

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  ++  + F N+ ++ E ++N+FG L  AF  G PPHGGIA 
Sbjct: 479 YDLVLNGTEIGGGSIRIHDRDLQEKIFENLSLTDEEIDNKFGFLLEAFDYGTPPHGGIAF 538

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           G+DR+VMLL   + +R+V  FP +QN   LL  +PS V+ EQL EL L++ ++  ++
Sbjct: 539 GLDRLVMLLGKLETIRDVIAFPKTQNATCLLTEAPSRVAEEQLEELNLKVQDDEVEV 595


>gi|309791721|ref|ZP_07686211.1| aspartyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308226214|gb|EFO79952.1| aspartyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 586

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 254/590 (43%), Positives = 350/590 (59%), Gaps = 8/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIA 62
           YR+H+CG+L    VG  V L+GWVHR R HG +IF+D+RD YGITQVV +  S     +A
Sbjct: 2   YRSHTCGELRQEHVGQEVTLAGWVHRRRDHGPLIFVDLRDRYGITQVVFDSQSPEVHAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  RSE+VL + G+V SR  E  N  + TG IE++A    +L+ A   PL +  E    E
Sbjct: 62  EEARSEFVLQVRGVVRSRPPEAHNPELATGDIEVTATSATVLNPARTTPLYIAKEGGEDE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR+ + +N++ R R+I  MR  + AE F+E  TPIL  S+PEGARD+LV
Sbjct: 122 ALRLKYRYLDLRRERMQRNMILRHRVIKFMRDFLDAEGFLEIETPILIKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFYALPQ+PQQ KQLLM +G+D+YFQ+A CFRDED R+DR P EF QLDMEMS
Sbjct: 182 PSRVHPGSFYALPQSPQQLKQLLMVAGYDKYFQVARCFRDEDQRADRQP-EFTQLDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQ+D+++ +E +   +         V   F R+ Y +A+ RYG+DKPDLR  + + N+
Sbjct: 241 FVEQEDVISLIERLFTQLCAAVVPHKRVLTPFPRLSYAEAMERYGSDKPDLRYGLELINL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++    + F VF   L    G +V  +   G G   R   D + E  R  G  GLA+   
Sbjct: 301 SDLLTATPFNVFKGAL--EQGGQVKGLRLPGCGNYTRKQLDELIEMVRGSGGKGLAWAAL 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D  G+V      AK L      AI  R+  Q GD    +A       +     R   A
Sbjct: 359 PAD-GGDV--RSSFAKLLAPGEMAAIIERMQAQPGDLLLIVADKASSVAAALDKLRRLFA 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L + + +   F W++DFP  +WN +E + D  H+PFT P    + L  +D   ++A  
Sbjct: 416 ERLNLADPDLLHFSWVLDFPLLDWNPDENRWDAVHHPFTAPHAEDQPLLASDPAKVRAQA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+  G IR H  +V  + F  +GIS+E  +++FG +  AF+ G PPHGGIA 
Sbjct: 476 YDLVLNGYEVGGGSIRIHRRDVQQRIFELLGISEETAQSQFGHMLEAFEYGAPPHGGIAP 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIDRIVMLL     +REV  FP +Q   DL+  +PS V   QL+EL + +
Sbjct: 536 GIDRIVMLLADESTIREVMAFPKTQQAADLMTNAPSEVDERQLKELHITL 585


>gi|298245177|ref|ZP_06968983.1| aspartyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297552658|gb|EFH86523.1| aspartyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 602

 Score =  476 bits (1225), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 247/592 (41%), Positives = 362/592 (61%), Gaps = 11/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEI 61
           +R+ +CG+L   D+   V LSGWV+R R HGG+IFLD+RD YG+TQV+ +P+ +    +I
Sbjct: 7   FRSATCGELTAKDIDREVTLSGWVNRRRDHGGLIFLDLRDRYGLTQVICDPERSREAHQI 66

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EY 120
           A  VRSE+V+ + GLV  R   T N  + TG+IE+ AQ IEIL+ +   P P+  +  + 
Sbjct: 67  ASEVRSEYVVQVKGLVKHRLPGTENTQLPTGEIEIVAQSIEILNYSRTTPFPINSDAIQV 126

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  +  NI+ R RI+  MR  +    F+E  TPIL  S+PEGARD+
Sbjct: 127 DEPLRLKYRYLDLRRPHMRDNIILRHRIVKEMRDYLDERGFLEIETPILMKSTPEGARDY 186

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+ +G FYALPQ+PQQ KQLLM +G DRYFQIA CFRDED R+DR P EF QLD+E
Sbjct: 187 LVPSRLYEGEFYALPQSPQQLKQLLMVAGLDRYFQIARCFRDEDQRADRQP-EFTQLDVE 245

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FV ++D++  +E++L  + E+ +        F  + + +A+ RYGTD PDLR  + + 
Sbjct: 246 MAFVSEEDVMGLIEDMLIKLIEKTTKKRIKQRPFPHLSFKEAMDRYGTDHPDLRFDLPLV 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +++      F VF   LS +   +   +P  G    R   D + E+AR+ G  GL  + 
Sbjct: 306 EISDLAAAGTFGVFKSALSASGMVKGLKVPG-GASYTRKEVDEITEFARTLGAKGLVQL- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +    P+ K +     +AI  RL+ Q GD   F+A             R  +
Sbjct: 364 -AIQEGGTIK--SPLTKFMAPEEVQAIVERLEGQPGDLLLFVADSAKVANDVLFRLRVKM 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLSIKA 479
           A+ L  I+      CW++DFP + ++E+ ++ D  HNPF+ M +  +E L  N  L I+A
Sbjct: 421 AERLKQIDPEEMALCWVVDFPLFHYDEDLQRYDAEHNPFSGMDEAHIERLDSNP-LDIRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
            QYD++CNGFE+  G +R +++E+  + FS + +S E ++ +FG +  AF+ G PPHGGI
Sbjct: 480 KQYDIICNGFEVGGGSVRINVAELQRKVFSLMKMSDEQIQEQFGHMLEAFEYGAPPHGGI 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VML     N+REV  FP +Q+  DLLMG+P+ V  +QL EL L++
Sbjct: 540 ALGVDRLVMLFADEDNIREVIAFPKTQSAQDLLMGAPALVDDKQLNELHLQV 591


>gi|148264250|ref|YP_001230956.1| aspartyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|189082100|sp|A5G3L5|SYD_GEOUR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146397750|gb|ABQ26383.1| aspartyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 593

 Score =  476 bits (1224), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/591 (42%), Positives = 364/591 (61%), Gaps = 12/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RTH CG L   D+G  V L GW HR R HGG+IF+D+RD  G+ QVV +PD+  A  + A
Sbjct: 10  RTHYCGALTAGDIGKEVVLMGWAHRRRDHGGLIFVDLRDREGLAQVVFDPDNSPAAHKKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++R+E+V+ I G V+ R   T+NAN+ TG++E+   + ++L+ ++ LP  +    +  E
Sbjct: 70  EAIRNEYVVAIRGKVIPRPDGTVNANLKTGEVEVLVSECKMLNRSKALPFTLDDYVDVAE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R K+R+LDLRR  L +N++ R+++    R  +    F+E  TP LT S+PEGARDFLV
Sbjct: 130 NLRLKHRYLDLRRPVLQENLILRSKVAQITRQYLTGNGFLELETPFLTKSTPEGARDFLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N+G FYALPQ+PQ +KQ+LM SGFDRYFQ+  CFRDED R+DR P EF Q+D EMS
Sbjct: 190 PSRINRGEFYALPQSPQLFKQILMVSGFDRYFQVVRCFRDEDLRADRQP-EFTQIDCEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++DI+  ME ++  +F E + G TV+    R+ Y ++IRR+G D PDLR  + +  +
Sbjct: 249 FIDREDIITVMEGLIARIFTE-TKGATVNLPIPRMTYAESIRRFGVDNPDLRFGLELVEL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++   ++ F+VF+ +  V  G  V  + AKG GG +R   D + E+A+  G  GLAY+  
Sbjct: 308 SDIVKNAGFKVFADV--VAGGGIVKGLNAKGCGGMSRKEIDDLTEFAKIYGAKGLAYV-- 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++   G      P+AK        A+    D ++GD   F+A  P          RNH+A
Sbjct: 364 KMTAEG---WQSPIAKFFTAEEISAMDKAFDAKEGDLLLFVADKPKVVNDSLGKLRNHLA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG+++ + F F WI DFP  EW+EEEK+    H+PFT P         +D    +A  
Sbjct: 421 KSLGLLDKDTFNFVWITDFPLLEWDEEEKRWAAVHHPFTAPMDEDLEYVESDPGRCRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  ++    F  +G S+E    +FG L  A   G PPHGGIA 
Sbjct: 481 YDLVLNGNEIGGGSIRIHQEKIQSLMFKMLGHSEEDARTKFGFLLDAMDYGAPPHGGIAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR++MLL G+ ++R+V  FP +Q    L+  +PS V ++QLRELGL+ V
Sbjct: 541 GLDRLIMLLTGSDSIRDVIAFPKTQKGACLMSEAPSAVDMKQLRELGLKTV 591


>gi|304407554|ref|ZP_07389206.1| aspartyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304343505|gb|EFM09347.1| aspartyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 602

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/599 (41%), Positives = 361/599 (60%), Gaps = 22/599 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           +THSCG L  ++VG  V L+GWV R R  GG++F+D+RD  GI Q V NPD   A  EIA
Sbjct: 4   KTHSCGTLTKANVGETVTLNGWVQRRRDLGGVLFIDLRDRTGIVQTVFNPDFSGAALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              R+E+VL + G V+ R  ET NAN+ TG+IE+   +IEI++ A+  P P+    E  E
Sbjct: 64  DKARNEFVLALRGTVVERDQETYNANLATGEIEIRVTEIEIMNAAKTPPFPIEDGVEVDE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           SIR K+R+LDLRR  + + ++ R++     R  +  E F++  TPILT S+PEGARD+LV
Sbjct: 124 SIRLKHRYLDLRRPEMQRTMLLRSKASKVFRDFLDGEGFLDVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+   F+ALPQ+PQ +KQLLM  G +RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHAEEFFALPQSPQIFKQLLMVGGLERYYQIARCFRDEDLRADRQP-EFTQVDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD +L  ME ++  VF E + G  +   F RI Y +A+ +YG+DKPDLR  + + N+
Sbjct: 243 FLSQDQLLAMMEQLMARVFRE-TIGYEIPLPFQRITYAEAMDKYGSDKPDLRFGLEIKNI 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF- 360
           T+   +S+ +VF+ + +   G EV A+ AKG    +R   D +  +A   G  GLA+I  
Sbjct: 302 TDIVANSDVKVFASVAA--SGGEVKALNAKGCASWSRKELDDLQPFAARYGGKGLAWITV 359

Query: 361 ----WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
               WR          GP+ K L     +A+  RL++++GD   F A  P        + 
Sbjct: 360 KDGEWR----------GPIVKFLKPEEIQALTARLEVEEGDLLTFSADKPKVVADVLGNL 409

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  + ++LG+I+ + ++F W++DFP  EW+E+ K+    H+PFT P      L   D   
Sbjct: 410 RLKLGRDLGLIDESQYKFLWVVDFPLLEWDEDAKRYVAMHHPFTRPNEEDLELLATDPGK 469

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD+V NG+E+  G +R +  +V    F  +G S E    +FG L  AF+ G PPH
Sbjct: 470 VRAQAYDIVLNGYEVGGGSMRIYKRDVQELMFKTLGFSMEQAHEQFGFLLDAFEYGTPPH 529

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GGIA G+DR+VMLL G  N+RE   FP + +  DL++ +PS V + QL +L +R V  P
Sbjct: 530 GGIAFGLDRLVMLLTGRTNLRETIAFPKTASATDLMVDAPSQVELSQLEQLHIRTVPKP 588


>gi|56421107|ref|YP_148425.1| aspartyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|62287517|sp|Q5KWS9|SYD_GEOKA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56380949|dbj|BAD76857.1| aspartyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 590

 Score =  472 bits (1215), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/592 (42%), Positives = 367/592 (61%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+ CG++  + VG  V L GWV + R  GG+IF+D+RD  GI QVVA+PD  +     A
Sbjct: 3   RTYYCGEVPETAVGERVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVASPDVSAEALAAA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VRSE+VL ++G V++R+ ET+N NI TG IE+ A++IEI++ A+  P  +  + +  E
Sbjct: 63  ERVRSEYVLSVEGTVVARAPETVNPNIATGSIEIQAERIEIINEAKTPPFSISDDTDAAE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + + +  R +I  ++R  + +E F+E  TP+LT S+PEGARD+LV
Sbjct: 123 DVRLKYRYLDLRRPVMFQTLALRHKITKTVRDFLDSERFLEIETPMLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  G +RY+QIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 183 PSRVHPGEFYALPQSPQIFKQLLMVGGVERYYQIARCFRDEDLRADRQP-EFTQIDIEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+EQ DI++  E ++  V +  + G  +   F RI YD+A+ RYG+DKPD+R  + + +V
Sbjct: 242 FIEQKDIMDLTERMMAAVVKA-AKGIDIPRPFPRITYDEAMSRYGSDKPDIRFGLELVDV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E   +S F+VF++  +V  G +V AI AKG     +R   D + E+A   G  GLA++ 
Sbjct: 301 SEIVRNSAFQVFAR--AVKEGGQVKAINAKGAAPRYSRKDIDALGEFAGRYGAKGLAWLK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              +E       GP+AK        A+R  L ++DGD   F+A +     +     R  +
Sbjct: 359 AEGEEL-----KGPIAKFFTDEEQAALRRALAVEDGDLLLFVADEKAIVAAALGALRLKL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+     F W+ D+P  E++EEE +   AH+PFTMP      L   +  +++A 
Sbjct: 414 GKELGLIDEAKLAFLWVTDWPLLEYDEEEGRYYAAHHPFTMPVRDDIPLLETNPSAVRAQ 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R    +V  + F  +G S+E    +FG L  AF+ G PPHGGIA
Sbjct: 474 AYDLVLNGYELGGGSLRIFERDVQEKMFRALGFSEEEARRQFGFLLEAFEYGTPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL G  N+R+   FP + +   LL  +P  VS +QL EL L +V
Sbjct: 534 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPGPVSDKQLEELHLAVV 585


>gi|251798351|ref|YP_003013082.1| aspartyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247545977|gb|ACT02996.1| aspartyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 600

 Score =  472 bits (1214), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/595 (42%), Positives = 357/595 (60%), Gaps = 12/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           +TH CG L  +++G  V L+GWV R R  GG++F+D+RD  GI Q V NPD       IA
Sbjct: 4   KTHQCGTLTKANIGEEVTLNGWVQRRRDLGGVLFIDLRDRTGIVQTVFNPDFSGEALAIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              R+E+VL + G V+ R AET+N N+ TG+IE+   +IE+++ A+  P P+    E  E
Sbjct: 64  DRARNEFVLAVKGTVVERDAETVNKNLATGEIEIRVTEIEVINAAKTPPFPIEDGVEVDE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LDLRR  +HK ++ R++     R  +  E FI+  TPILT S+PEGARD+LV
Sbjct: 124 SLRLKYRYLDLRRPEMHKTLLLRSKAAKVFRDFLDGEGFIDVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G F+ALPQ+PQ +KQLLM  G +RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHEGEFFALPQSPQIFKQLLMVGGIERYYQIARCFRDEDLRADRQP-EFTQVDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD +L  ME ++  +F E + G  V     RI Y DA+ +YG+DKPDLR  + + ++
Sbjct: 243 FLTQDQLLGMMEQLIARLFRE-TIGVEVELPIQRITYADAMNKYGSDKPDLRFGMEIEDI 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           T+    S+ +VF+ + +   G  V A  AKG G  +R   D +  +A   G  GLA+I  
Sbjct: 302 TDIVATSDVKVFASVAA--SGGVVKAFNAKGCGHWSRKELDDLQPFAARYGGKGLAWITI 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +  E       GP+ K L      A+  RL+++DGD   F A           + R  + 
Sbjct: 360 KDGE-----WKGPIVKFLKPEEIAALTERLNVEDGDLLTFSADKAKVVADVLGNLRLKVG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +ELG+I+ + F+F W++DFP  EW+EE K+    H+PFT P+     L   D   I+A  
Sbjct: 415 RELGLIDDSKFKFVWVVDFPMLEWDEEAKRYVAVHHPFTRPKDEDLHLFDTDPGQIRAQA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  ++  + F  +G + E    +FG L  AF  G PPHGGIA 
Sbjct: 475 YDIVLNGYEVGGGSMRIYKRDIQEKMFGALGFNMEEAHEKFGFLLDAFDYGTPPHGGIAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G DR+VMLL G  N+RE   FP + +  DLL  +PS V + QL +L +R V  PK
Sbjct: 535 GFDRLVMLLTGRTNLRETIAFPKTASATDLLCDAPSPVELSQLEQLHIRTVLKPK 589


>gi|297529264|ref|YP_003670539.1| aspartyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252516|gb|ADI25962.1| aspartyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 590

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 251/592 (42%), Positives = 368/592 (62%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+ CG++  + VG  V L GWV + R  GG+IF+D+RD  GI QVVA+PD  +     A
Sbjct: 3   RTYYCGEVPETAVGERVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVASPDVSAEALAAA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VRSE+VL ++G V++R+ ET+N NI TG+IE+ A++IEI++ A+  P  +  + +  E
Sbjct: 63  ERVRSEYVLSVEGTVVARAPETVNPNIATGRIEIQAERIEIINEAKTPPFSISDDTDAAE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + + +  R +I  ++R  + +E F+E  TP+LT S+PEGARD+LV
Sbjct: 123 DVRLKYRYLDLRRPVMFQTLALRHKITKTVRDFLDSERFLEIETPMLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  G +RY+QIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 183 PSRVHPGEFYALPQSPQIFKQLLMVGGVERYYQIARCFRDEDLRADRQP-EFTQIDIEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+EQ+DI++  E ++  V +  + G  +   F RI YD+A+ RYG+DKPD+R  + + +V
Sbjct: 242 FIEQEDIIDLTERMMAAVVKA-AKGIDIPRPFPRITYDEAMSRYGSDKPDIRFGLELVDV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E    S F+VF++  +V  G +V AI AKG     +R   D + E+A   G  GLA++ 
Sbjct: 301 SEIVRDSAFQVFAR--AVKEGGQVKAINAKGAAPRYSRKDIDALGEFAGRYGAKGLAWLK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              +E       GP+AK        A+R  L ++DGD   F+A +     +     R  +
Sbjct: 359 AEGEEL-----KGPIAKFFTDEEQAALRRALAVEDGDLLLFVADEKAIVAAALGALRLKL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+     F W+ D+P  E++EEE +   AH+PFTMP      L   +  +++A 
Sbjct: 414 GKELGLIDEAKLAFLWVTDWPLLEYDEEEGRYYAAHHPFTMPVRDDIPLLETNPGAVRAQ 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R    +V  + F  +G S+E    +FG L  AF+ G PPHGGIA
Sbjct: 474 AYDLVLNGYELGGGSLRIFERDVQEKMFRALGFSEEEARRQFGFLLEAFEYGTPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL G  N+R+   FP + +   LL  +P  VS +QL EL L +V
Sbjct: 534 LGLDRLVMLLAGRMNLRDTIAFPKTASASCLLTEAPGPVSDKQLEELHLAVV 585


>gi|313906015|ref|ZP_07839368.1| tRNA synthetase class II (D K and N) [Eubacterium cellulosolvens 6]
 gi|313469128|gb|EFR64477.1| tRNA synthetase class II (D K and N) [Eubacterium cellulosolvens 6]
          Length = 594

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 256/602 (42%), Positives = 364/602 (60%), Gaps = 32/602 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH+CG+L + D G  V L GW   +R     + F+ +RD YG TQ+V   +    E   
Sbjct: 4   RTHTCGELRIGDAGKTVTLVGWFENIRKVSKNLGFVVLRDFYGTTQLVIETEE-MMEQFN 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL--SVAEELPLPVFGEREYP 121
           ++  E  + I G V  RS++  N+N+ TG IE+   ++ +L  ++  ELP  +   +E  
Sbjct: 63  AINEESTISITGEVRERSSK--NSNMETGDIEVVPTEMTVLGKNIHNELPFQINHSKEAD 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R KYR+LDLR   +   IV R++I   +R  MI   F+E +TPILT SSPEGARD+L
Sbjct: 121 ENTRLKYRYLDLRNPEVKNKIVLRSQITAELRKSMIEHGFLEITTPILTCSSPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLDMEM
Sbjct: 181 VPSRNFPGKFYALPQAPQQFKQLLMTSGFDRYFQIAPCFRDEDARADRSPGEFYQLDMEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +F +Q+D+   +E+VL  VFE++    T     F+RI Y +A+  YGTDKPDLR  + + 
Sbjct: 241 AFADQEDVFEVLEDVLPPVFEKYGVYKTAKKPPFMRIPYLEALDTYGTDKPDLRISLKLQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           + TE      F  F        G  V A+ A      R   D++ E        G    +
Sbjct: 301 DATEVLADCGFEPFK-------GQTVKAVVAHDFTATRKAIDKVCEEVEMLS--GAKAYW 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +++ E+  ++  G +AK +   N E +  +L ++ GD     AG        A      +
Sbjct: 352 FKVGENNEIS--GGIAKFVKD-NAETVIEKLGLKAGDFVGVTAGT----LRAAQKTGGAL 404

Query: 421 AQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----G 471
            + LG      +    ++FCWI+DFP YE  EE  K++F HNPF+MPQGGM+ LK     
Sbjct: 405 IKVLGATFEQYMEKEQYQFCWIVDFPMYEIGEESGKLEFCHNPFSMPQGGMQGLKDAVAN 464

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +  L + A+QYDLVCNG E++SG +RNH  E+M++AFS VG+ ++ V+ +F  +Y AF  
Sbjct: 465 HTELDVLAYQYDLVCNGVELSSGAVRNHDPELMVEAFSVVGLGEDDVKAKFPAMYNAFTY 524

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPH GIA G+DR++ML+ G +++RE+  FPM++N  D++MG+PSTV  +QL ++ +RI
Sbjct: 525 GAPPHAGIAPGVDRMIMLIAGEESIREIIPFPMNKNAMDIMMGAPSTVEEKQLTDVHIRI 584

Query: 592 VE 593
           +E
Sbjct: 585 IE 586


>gi|218780598|ref|YP_002431916.1| aspartyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|226736533|sp|B8FKS6|SYD_DESAA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218761982|gb|ACL04448.1| Aspartyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 597

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/595 (42%), Positives = 365/595 (61%), Gaps = 13/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG L   D G  V L GW  R R HGG+IF+D+RD YG+TQVV NP+  +   ++A
Sbjct: 10  RTHNCGVLRKEDTGKTVTLMGWAQRWRDHGGVIFIDLRDRYGVTQVVFNPENNAEVHKLA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+RSEWV+ + G V+ R    +N  + TG+IE+    ++IL+ ++  P  V    E  E
Sbjct: 70  DSIRSEWVIAVQGEVLERPDGMVNPKMETGEIEVMVSDLKILNKSKTPPFMVEDNAEVSE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YR+LDLRR  + KNI+ R ++   +R  +    F++  TP+LT S+PEGARD+LV
Sbjct: 130 NLRLEYRYLDLRRPRIAKNIMLRHQVGACVRAFLNENEFLDIETPVLTKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQLLM +G+DRY+QI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRVNTGLFYALPQSPQLFKQLLMVAGYDRYYQIVRCFRDEDLRADRQP-EFTQIDLEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV ++D++   E ++  VF++   G  V   F R+ Y DA+ RYG DKPDLR  + +  V
Sbjct: 249 FVGEEDVMGIAEQMIAKVFKDVM-GKEVKTPFDRLTYKDAMDRYGLDKPDLRFDLELKEV 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           +     S+F+VF+ +  V  G  V A+ AKG    +R   D +  +    G  GLA+I  
Sbjct: 308 SSIVEGSDFKVFASV--VKKGGMVKAMNAKGCAHFSRKVIDDLTAFVAVYGAKGLAWI-- 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNHI 420
           ++ E G  +   P+AK        A+   LDM  GD  FF+A D +K  + A    RN +
Sbjct: 364 KVKEDG--SWQSPIAKFFTDDEKAAMAQTLDMAPGDLIFFVA-DNVKVTNDALGHLRNRV 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+ N F F W+ +FP  E++E +K+    H+PFT P      L  +D  ++++ 
Sbjct: 421 AKELGLIDENEFRFVWVTEFPLVEYDETDKRYVALHHPFTAPMEEDLDLLESDPGAVRSR 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  E+  + F+ +G+ +E  E +FG L +A   G PPHGG+A
Sbjct: 481 AYDMVLNGTELGGGSIRIHQPEMQEKVFNMLGLGQEEAEEKFGFLLKALAFGAPPHGGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G DR++MLL G  ++R++  FP +Q    LL  +PS V+ EQL EL LRI ++P
Sbjct: 541 FGFDRLIMLLSGENSIRDIIPFPKTQKAACLLTDAPSEVAFEQLAELALRIKKDP 595


>gi|167040111|ref|YP_001663096.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300914196|ref|ZP_07131512.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307724569|ref|YP_003904320.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|238687551|sp|B0K0N5|SYD_THEPX RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166854351|gb|ABY92760.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300889131|gb|EFK84277.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307581630|gb|ADN55029.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 592

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 257/595 (43%), Positives = 363/595 (61%), Gaps = 22/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L V DV  +V + GWV R R HGG++F+D+RD  GI QVV + +  S  FE  
Sbjct: 10  RTHMCGELTVEDVDKYVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFSNEVSSEAFEKV 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +SVRSE+VL I+G V+ RS E +N  I TG+IE+ A  ++ILS +E  P P+       E
Sbjct: 70  QSVRSEYVLAIEGKVVKRSPENVNPKISTGEIEIYANTLKILSKSETPPFPIEDRSNVSE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR ++ KN++ R +I   +R  +    FIE  TP+L  S+PEGARD+LV
Sbjct: 130 AVRLKYRYLDLRRPSMQKNLMTRFKITKVVRDFLNKNGFIEIETPLLIKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRIYPGKFYALPQSPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE +D+L   E ++  +F+E + G  V   F R+ Y +++ R+GTDKPDLR  + + ++
Sbjct: 249 FVEVEDVLKINEKMIAEIFKE-TLGIDVPIPFKRLSYQESMERFGTDKPDLRFGMELKDL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++    SEF VF   L  N    V  I  KG     R   D + E+A++ G  GL +I  
Sbjct: 308 SDIVAQSEFNVFKTALKNNGS--VRGINVKGAASMPRRQLDELVEFAKTYGAKGLLWIQV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA-GDPLKFCSFAADARNHI 420
              E  +     P  K L+    + I  RL+ + GD    +A  D + F + A     H+
Sbjct: 366 FEKEVKS-----PATKFLSEEEMKKILERLEAEAGDLLLIVADKDEIVFDTLA-----HL 415

Query: 421 AQELG----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             ELG    +I+ N +EF WI+DFP  E++E EK+    H+PFT P+     L   + L 
Sbjct: 416 RLELGKRFNLIDENKYEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEPLK 475

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD+V NG EI  G IR H +E+  + F  +G S+E    RFG L  AF+ G PPH
Sbjct: 476 VRAKAYDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFKYGAPPH 535

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GGIA G+DR+ M++ G+  +R+V  FP +QN   L+  +PS VS EQL+EL +++
Sbjct: 536 GGIAYGLDRLAMIITGSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 590


>gi|297544515|ref|YP_003676817.1| aspartyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842290|gb|ADH60806.1| aspartyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 592

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 256/591 (43%), Positives = 359/591 (60%), Gaps = 14/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L V DV   V + GWV R R HGG++F+D+RD  GI QVV N +  S  FE  
Sbjct: 10  RTHMCGELTVEDVDKSVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFNNEVSSEAFEKV 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VRSE+VL I+G V+ R+ E +N  I TG+IE+ A  ++ILS +E  P P+       E
Sbjct: 70  QGVRSEYVLAIEGKVVKRAPENVNPKIATGEIEIYANTLKILSKSETPPFPIEDRSNVSE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR ++ KN++ R +I   +R  +    FIE  TP+L  S+PEGARD+LV
Sbjct: 130 AIRLKYRYLDLRRPSMQKNLMTRFKITKVVRDFLNKNGFIEIETPLLIKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRIYPGKFYALPQSPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE DD+L   E ++  +F+E + G  V+  F R+ Y +A+ R+GTDKPDLR  + + ++
Sbjct: 249 FVEVDDVLEINEKMIAQIFKE-TLGIDVTIPFKRLSYQEAMERFGTDKPDLRFGMELKDL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++    SEF VF   L  N G  V  I  K      R   D + E A++ G  GL ++  
Sbjct: 308 SDIVSRSEFNVFKTALK-NSG-SVRGINVKSAASMPRRQLDELVELAKTYGAKGLLWMQV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
             +E  +     P  K L+    E I  RL+ + GD    +A  D + F +     R  +
Sbjct: 366 FENEVKS-----PATKFLSEEEIEKILERLEAETGDLLLIVADKDEIVFDTLGH-LRLEL 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + L +I+ N +EF WI+DFP  E++ EEK+    H+PFT P+     L   + L ++A 
Sbjct: 420 GKRLNLIDENKYEFVWIVDFPLLEYDSEEKRYVAKHHPFTAPKDEDIDLLEKEPLKVRAK 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H +E+  + F  +G S E    RFG L  AF+ G PPHGGIA
Sbjct: 480 AYDIVLNGVEIGGGSIRIHDTELQKRMFKVLGFSDEKAWERFGFLMEAFKYGAPPHGGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+ M++ G+  +R+V  FP +QN   L+  +PS VS EQL+EL +++
Sbjct: 540 YGLDRLAMIITGSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 590


>gi|253574920|ref|ZP_04852260.1| aspartyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251845966|gb|EES73974.1| aspartyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 592

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/599 (42%), Positives = 360/599 (60%), Gaps = 12/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTH CG L  +++G  V L+GWV   R  GG++F+D+RD  GI Q+V NP       +IA
Sbjct: 3   RTHHCGALSTANIGETVTLNGWVQTRRDLGGVLFIDLRDRSGIVQIVFNPAYSGEALKIA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VRSE+VL + G V++R  ET+N N+ TG IE+   +IE+L+ A+  P  +    E  E
Sbjct: 63  DRVRSEYVLAVTGKVVARDPETVNPNLPTGDIEVQITEIEVLNAAKTPPFFIEDGIEVDE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LDLRR  + + +  R++     R  +  E FIE  TPILT SSPEGARD+LV
Sbjct: 123 SLRLKYRYLDLRRPEMQQTLWLRSKAAKVFRDFLDGEGFIEVETPILTKSSPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G F+ALPQ+PQ YKQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVHPGEFFALPQSPQLYKQLLMVSGIERYYQIARCFRDEDLRADRQP-EFTQVDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +D++L  ME ++  +F+E + G  +   F RI Y DA+ +YG+DKPDLR  + + NV
Sbjct: 242 FLSRDELLEMMEKLIVRLFKE-TKGIDIPTPFQRISYADAMDKYGSDKPDLRFGLELVNV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++   +S  +VFS +  +  G EV  + AKG G  +R   D +  +A   G  GLA+I  
Sbjct: 301 SDLVANSGVKVFSSV--IEKGGEVKVLNAKGCGTWSRKDIDDLGPYAARYGAKGLAWIQV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +  E       GP+ K       EAI+ R   ++GD   F A +           R  I 
Sbjct: 359 KEGEF-----RGPIVKFFTEQEIEAIKERTGAEEGDLLLFSADNKKVVADVLGALRLKIG 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++LG+I+ + ++F W++DFP   W+EE+K+    H+PFT P+     L   D   I A  
Sbjct: 414 RDLGLIDDSVYKFAWVVDFPLLGWDEEQKRYVAEHHPFTRPRDEDLPLFDTDPGKILAQA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+  G +R +  +V  + F  +G+S E  +++FG L  AF+ G PPHGGIA 
Sbjct: 474 YDLVLNGYEVGGGSMRIYKRDVQEKMFKAIGLSPEEAQDKFGYLMDAFEYGTPPHGGIAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           G DR+VMLL G  N+RE   FP + +  DLLM SPS V   QL +L +++     ++ K
Sbjct: 534 GFDRLVMLLAGRSNLRETIAFPKTASATDLLMNSPSEVDGSQLDQLHIKLAPKLAEVKK 592


>gi|302669512|ref|YP_003829472.1| aspartyl-tRNA synthetase AspS [Butyrivibrio proteoclasticus B316]
 gi|302393985|gb|ADL32890.1| aspartyl-tRNA synthetase AspS [Butyrivibrio proteoclasticus B316]
          Length = 625

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 261/621 (42%), Positives = 373/621 (60%), Gaps = 46/621 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           M + RTH+CG+L +S+VG  V L GW+  +R  G G+ F+ +RD YG TQ+V   +    
Sbjct: 14  MMQSRTHNCGELRISNVGESVTLVGWLENMREVGSGLGFVVLRDFYGTTQIVLETEEMV- 72

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGE 117
           + AK++  E  + + GLV  RS++  N    TG IE+  + I +L      ELP  +   
Sbjct: 73  KTAKAINKESTISVKGLVRERSSK--NPKQETGDIEVVPESITVLGRCRYNELPFEINHS 130

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           RE  E+ R KYR+LDLR   + KNI+ R  +I ++R  M    F+E +TPILTASSPEGA
Sbjct: 131 READETARLKYRYLDLRNPEVKKNIILRCNVIAALRQAMTEHGFMEITTPILTASSPEGA 190

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVP+R + G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R DR PGEFYQL
Sbjct: 191 RDYLVPARKHPGKFYALPQAPQQFKQLLMTAGFDRYFQIAPCFRDEDARGDRSPGEFYQL 250

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNP 296
           DMEM+F  Q+D+ +  E+VL  VFE+F   +  S   F RI Y +A+ +YG+DKPDLR  
Sbjct: 251 DMEMAFATQEDVFSVCEDVLPPVFEKFGTYDRASKAPFTRIPYLEAMEKYGSDKPDLRID 310

Query: 297 IIMHNVTEHFVHSEFRVFSKIL--------------SVNPGYEVWAIPAKGGGGNRAFCD 342
           + + +VTE      F  F+  +                  G  + A+       +R F D
Sbjct: 311 LTVTDVTETLKDCGFGPFASTVSAEAAEASEGALTAGAATGVRIKAVVISDFKESRKFID 370

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
           +       + Q G    ++R+DE+G +  +G ++K +  +  +A+   L ++ GD     
Sbjct: 371 KT--IGDVEVQSGNKAYWFRMDENGEL--VGGISKFVAPIK-DAVVSALSLKAGDLVVLS 425

Query: 403 AGD--------PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
           +G          +   +F A    H+ +E        +EFCWI+DFP YE  EE  +++F
Sbjct: 426 SGKLTAAQKTAGVIVKTFGAAVPGHMDKEK-------YEFCWIVDFPMYEIGEESGELEF 478

Query: 455 AHNPFTMPQGGMESL----KGN-DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
            HNPF+MP GG+E+L    +G  D L+I A QYDLV NG E++SG +RNH  E+M++AF 
Sbjct: 479 CHNPFSMPSGGLETLLKAERGEIDPLTITADQYDLVVNGIELSSGAVRNHDPEIMIKAFE 538

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            V + +E V+ +F  +Y AF  G PPH GIA G+DR+VMLL G  ++RE+  FPM++N  
Sbjct: 539 MVRLGEEDVKAKFPAMYNAFCYGAPPHAGIAPGVDRMVMLLAGEDSIREIIPFPMNKNAQ 598

Query: 570 DLLMGSPSTVSVEQLRELGLR 590
           D++MG+PS V+ +QL EL ++
Sbjct: 599 DIMMGAPSYVTDKQLEELHIK 619


>gi|289578235|ref|YP_003476862.1| aspartyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527948|gb|ADD02300.1| aspartyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 592

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 256/591 (43%), Positives = 359/591 (60%), Gaps = 14/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L V DV   V + GWV R R HGG++F+D+RD  GI QVV N +  S  FE  
Sbjct: 10  RTHMCGELTVEDVDKSVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFNNEVSSEAFEKV 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VRSE+VL I+G V+ R+ E +N  I TG+IE+ A  ++ILS +E  P P+       E
Sbjct: 70  QGVRSEYVLAIEGKVVKRAPENVNPKIATGEIEIYANTLKILSRSETPPFPIEDRSNVSE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR ++ KN++ R +I   +R  +    FIE  TP+L  S+PEGARD+LV
Sbjct: 130 AIRLKYRYLDLRRPSMQKNLMTRFKITKVVRDFLNKNGFIEIETPLLIKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRIYPGKFYALPQSPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE DD+L   E ++  +F+E + G  V   F R+ Y +A+ R+GTDKPDLR  + + ++
Sbjct: 249 FVEVDDVLEINEKMIAQIFKE-TLGIDVPIPFKRLSYQEAMERFGTDKPDLRFGMELKDL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++    SEF VF   L  N G  V  I  K      R   D + E A++ G  GL ++  
Sbjct: 308 SDIVSRSEFNVFKTALK-NSG-SVRGINVKSAASMPRRQLDELVELAKTYGAKGLLWMQV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
             +E  +     P  K L+    E I  RL+ + GD    +A  D + F +     R  +
Sbjct: 366 FENEVKS-----PATKFLSEKEIEKILERLEAETGDLLLIVADKDEIVFDTLGH-LRLEL 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + L +I+ N +EF WI+DFP  E++ EEK+    H+PFT P+     L   + L ++A 
Sbjct: 420 GKRLNLIDENKYEFVWIVDFPLLEYDSEEKRYVAKHHPFTAPKDEDIDLLEKEPLKVRAK 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H +E+  + F  +G S+E    RFG L  AF+ G PPHGGIA
Sbjct: 480 AYDIVLNGVEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFKYGAPPHGGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+ M++ G+  +R+V  FP +QN   L+  +PS VS EQL+EL +++
Sbjct: 540 YGLDRLAMIITGSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 590


>gi|270308031|ref|YP_003330089.1| aspartyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153923|gb|ACZ61761.1| aspartyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 598

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/596 (41%), Positives = 361/596 (60%), Gaps = 14/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           +THSC  L   ++G+ V L+GWVHR R HGG+IF+D+RD  GI QVV NP+  + C +I 
Sbjct: 3   KTHSCA-LTQENIGTEVTLAGWVHRRRDHGGVIFIDLRDREGIVQVVFNPEQSTGCLDIG 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +RSE+VL + G+V  R A T N+ + +G +E+ A   +IL+ A+  P  +  E E  E
Sbjct: 62  KELRSEYVLQVKGVVSRRPAGTENSRMPSGLVEVVAADAKILNAAKTPPFYINEEVEVDE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LD+RR  +  N++ R + ++ MR  +    FIE  TPIL  S+PEGARD+LV
Sbjct: 122 SLRLKYRYLDIRRQGMKNNLIIRHKAVSFMREFLNTRGFIEIETPILIKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQQ KQLLM +G ++Y+Q+A CFRDED R+DR P EF QLDMEMS
Sbjct: 182 PSRLFPGQFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQP-EFTQLDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++D++  ME++  G+          +  F RI + DA+ +YG DKPDLR  + + ++
Sbjct: 241 FVDENDMMQLMEDLFTGLVASVRPDMKYNKKFPRISFADAMEKYGCDKPDLRFGMELADI 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+    S F VF  + +   G  + AI A G GG N++  + +   A+  G  G   I  
Sbjct: 301 TDIGASSAFGVFKNVAA--QGGAIKAISAPGCGGYNKSQQEELINLAKKYGAAGSVPISL 358

Query: 362 RLDESGNVAGM------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
              ESG +  +         AK+L +   + I  R   + GD    +AG      S   +
Sbjct: 359 SA-ESGELKDLTMEMVKSVAAKYLTLEEIKTIAERSGAKSGDLILIVAGARKMVNSVLGE 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            RNH+A +LG+ + N   F +++DFP ++W+EE K+ D  H+PFT P      L   D  
Sbjct: 418 MRNHLAAKLGLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLEADMPLMDTDPA 477

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + +  YD+VCNG+EIA G IR H +++  + F  +G + E +  RFG L  AF+ G PP
Sbjct: 478 KVGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFHLLGYNDEQINERFGHLLEAFEFGAPP 537

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG+A GIDR VMLL G  ++REV  FP +Q   DLL G+PS V  +Q+R+L +RI
Sbjct: 538 HGGVAPGIDRFVMLLAGETSIREVIPFPKNQAAQDLLFGAPSVVDDKQIRDLHIRI 593


>gi|302336856|ref|YP_003802062.1| aspartyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301634041|gb|ADK79468.1| aspartyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 594

 Score =  469 bits (1207), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 257/597 (43%), Positives = 376/597 (62%), Gaps = 16/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           RT +CG+L  S VG  V L+GWVHR R HGGI+F+++RD YGITQVV + D++    E A
Sbjct: 6   RTATCGELNSSRVGETVTLNGWVHRNRDHGGILFINLRDRYGITQVVIDEDASAPLKEKA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K ++ E+ + + G+V  R  E +N ++ TG+IE++A +IEIL+  + LP  +  + +  E
Sbjct: 66  KELKFEYCIAVVGIVRRRPDEMVNKDMNTGEIEVAASQIEILTKCDVLPFMIDEKSDAKE 125

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR  ++ + I  RT +  + R  +I + F+E  TP +  S+PEGARDFLV
Sbjct: 126 DLRLKYRYLDLRSFSMQRKIRLRTDVTFAAREFLIGKGFMEIETPTMIKSTPEGARDFLV 185

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQ+PQ YKQ+LM SGFDRYFQIA CFRDED R DR P E  Q+DMEMS
Sbjct: 186 PSRIHAGKFYALPQSPQLYKQILMVSGFDRYFQIAHCFRDEDARGDRQP-EHTQIDMEMS 244

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV +DD+   +E ++  +F++ + G  +   F R+ YDDA+ R+G+DKPDLR  + M  V
Sbjct: 245 FVSKDDVFEVVEGMMSHIFDK-TLGVKLEIPFQRLPYDDALNRFGSDKPDLRFGLEMKTV 303

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            E    S F  F  +++   G  V A+ A G  G +R     + + A+  G  GLA++  
Sbjct: 304 DELASKSGFNAFKSVIA--EGGCVKALVASGCAGYSRKQISELEDAAKVYGAKGLAWM-- 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++ ESG   G   V+K  + +  E +   L+ Q+GD    +       C+     R+ + 
Sbjct: 360 KVGESGIEGG---VSKFFDGIADELL-ASLEAQEGDLILMVGDKWNVACTSLGAVRSKLG 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAF 480
           ++LG+I    F FCWI+DFP +E+NEEE++ + AH+ FTMPQ   +++L+ N   ++K  
Sbjct: 416 KDLGLIEAGTFRFCWIVDFPLFEYNEEEQRWEAAHHMFTMPQEQYLDTLEENP-GAVKGD 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLVCNGFE+ASG IR H  E+  + F+ VG S E  ENRFG L  AF+ G PPHGGIA
Sbjct: 475 LYDLVCNGFELASGSIRIHDPEIQKRIFNIVGFSSEEAENRFGFLLNAFRYGPPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VM++ G  +++EV  FP +      +  SPS V  +QL+ L +++ + P+K
Sbjct: 535 PGLDRLVMIMAGENSIKEVIAFPKNNQAYSPMDDSPSLVDEDQLKMLHIKL-DMPEK 590


>gi|196250094|ref|ZP_03148788.1| aspartyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|196210278|gb|EDY05043.1| aspartyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 590

 Score =  469 bits (1206), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/592 (42%), Positives = 366/592 (61%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ CG++  + VG  V L GWV + R  GG+IF+D+RD  GI QVVA+PD +      A
Sbjct: 3   RTYYCGEVPETAVGERVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVASPDVSVEALATA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VRSE+VL ++G V++R+ ET+N NI TG+IE+ A++I+I++ A+  P  +  + +  E
Sbjct: 63  ERVRSEYVLSVEGTVVARAPETVNPNIATGRIEVHAERIDIINEAKTPPFAIADDTDAAE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR T+ + +  R ++  ++R  +  E F+E  TP+LT S+PEGARD+LV
Sbjct: 123 DVRLKYRYLDLRRPTMFQTLELRHKVAKAVRNFLDGERFLEVETPMLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+QI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 183 PSRVHPGEFYALPQSPQIFKQLLMVGGFERYYQITRCFRDEDLRADRQP-EFTQIDIEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+Q+DI++  E ++  V +  + G  +   F RI YD+A+ RYG+DKPD+R  + + +V
Sbjct: 242 FVDQEDIIDLTERMMAAVVKA-TKGIDIPRPFPRITYDEAMSRYGSDKPDVRFGLELVDV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E    S F+VF++  +V  G +V AI  KG     +R   D + E+A   G  GLA   
Sbjct: 301 SEAVRGSAFQVFAR--AVEQGGQVKAINVKGAASRYSRKDIDALAEFAGRYGAKGLA--- 355

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E G +   GP+AK        A+R  L  +DGD   F+A +     +     R  +
Sbjct: 356 WLKVEGGELK--GPIAKFFVDDEQTALRQLLAAEDGDLLLFVADEKAIVAAALGALRLKL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+     F W+ D+P  E++EEE +   AH+PFTMP      L   +  +++A 
Sbjct: 414 GKELGLIDETKLAFLWVTDWPLLEYDEEEGRYYAAHHPFTMPVRDDIPLLETNPGAVRAQ 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R    +V  + F  +G  +E    +FG L  AF+ G PPHGGIA
Sbjct: 474 AYDLVLNGYELGGGSLRIFERDVQEKMFRALGFDQEEARRQFGFLLEAFEYGTPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL G  N+R+   FP + +   LL  +P  VS +QL+EL L +V
Sbjct: 534 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPGPVSEKQLKELHLAVV 585


>gi|159897936|ref|YP_001544183.1| aspartyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|238687086|sp|A9B392|SYD_HERA2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|159890975|gb|ABX04055.1| aspartyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 594

 Score =  469 bits (1206), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/593 (42%), Positives = 356/593 (60%), Gaps = 11/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RTH+CG+L    +   V L+GWVHR R HG ++FLD+RD YG+TQV+ +P S      + 
Sbjct: 3   RTHTCGELRRDHIDQTVTLAGWVHRRRDHGTVLFLDLRDRYGLTQVIVDPSSNPEARAML 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+++E+V+ + G V SR     NAN+ TG IEL  Q  +IL+ A+  P+ V  +    E
Sbjct: 63  DSIKNEYVIQVTGRVRSRLEGAENANLATGAIELEVQSAKILNTAKTPPILVNRDGGEDE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+++LRR+     +  R R I  MR  M  E F E  TPIL  S+PEGARD+LV
Sbjct: 123 ALRLKYRYIELRRERQQHILGLRHRTIKFMRDWMDREGFWEIETPILMKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQ+PQQ KQLLM SG D+YFQIA C RDED R+DR P EF QLD+EMS
Sbjct: 183 PSRLHPGEFYALPQSPQQLKQLLMVSGIDKYFQIARCMRDEDLRADRQP-EFTQLDIEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDD+L+ +E ++  +    +    + + F R+ Y DAI  YG+DKPDLR  +   NV
Sbjct: 242 FVEQDDVLDVVERLMTELVANVTPHKRLVSPFPRLTYADAIEYYGSDKPDLRYDLKFVNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            E    S+F VF+  LS   G +V AI   G G  +R   D + E A+  G  G+A++  
Sbjct: 302 GEIVKDSQFGVFTGALS--SGGKVQAIRLPGCGSYSRKQIDDLQEVAKIGGAKGMAWMAI 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D  G+V    P+AK       + ++     + GD   ++A  P    +     R  +A
Sbjct: 360 EAD--GSV--RSPIAKFFEQAQLDQLKSATAAEAGDLIVYVADKPAVVAASLDKVRREMA 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAF 480
           + L + + +   F W++DFP +E+N E  + D AH+PF M     +E ++  +   ++A 
Sbjct: 416 KRLDLADKDLMHFAWVIDFPMFEYNAESGEWDAAHHPFCMVNPADVEKMQRGEFEGVRAA 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLVCNG+E+ASG IR H   +    F  +  S E ++ RFG +  AF+ G PPHGG+A
Sbjct: 476 SYDLVCNGYELASGSIRIHDRSIQQYIFDRLPYSPEEIQKRFGHMLEAFEYGAPPHGGMA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            GIDR+VMLL    N+R+V  FP +Q   DL+M +PS+V  +QLRELGLR+ +
Sbjct: 536 PGIDRLVMLLADTDNIRDVIAFPKTQRAEDLMMNAPSSVDAKQLRELGLRLAD 588


>gi|212703761|ref|ZP_03311889.1| hypothetical protein DESPIG_01809 [Desulfovibrio piger ATCC 29098]
 gi|212672729|gb|EEB33212.1| hypothetical protein DESPIG_01809 [Desulfovibrio piger ATCC 29098]
          Length = 618

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 252/599 (42%), Positives = 362/599 (60%), Gaps = 16/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H+CG L + + G  V L GWV   R HGG+IF+D+RD  G+TQVV +PD   A  E A
Sbjct: 26  RSHTCGQLTLDNDGQTVCLMGWVQYRRDHGGLIFVDLRDREGLTQVVFSPDIAPAAHENA 85

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+VL I G+V  R     N N++TG IE+   + ++L+ ++  P  +    +  E
Sbjct: 86  HILRSEYVLAIKGVVRPRPEGMTNPNLVTGAIEVVVHEWKLLNTSKTPPFAIEERCDAGE 145

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R  +R+LDLRR  +  N+  R ++  ++R ++  + F+E  TP+LT S+PEGARDFLV
Sbjct: 146 NLRLAWRYLDLRRPRMQANLRLRHKVAQAIRRQLDDDGFLEVETPVLTKSTPEGARDFLV 205

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM  GFDRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 206 PSRLNPGQFYALPQSPQLFKQLLMVGGFDRYFQIVRCFRDEDLRADRQP-EFTQVDIEMS 264

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ ++   EN++  VF +   G  +   F R+ Y++A+RRYG DKPD R  + + ++
Sbjct: 265 FVDEEKVMTMAENLMARVFHDVM-GMDIPRPFPRMKYEEAMRRYGVDKPDTRFGLELVDI 323

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+    S F++F++   V       A+   GG    R   D   E+ +  G  GLA+I  
Sbjct: 324 TDIVRGSGFKLFAQAKLVK------AMKVPGGEAMTRKEIDAYTEFVKIYGAMGLAWIKI 377

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + +E        P+AK L+      IR  LD+Q GD  FF AG+P    +   + R H+ 
Sbjct: 378 KENE-----WQSPIAKFLSEEERAGIREALDLQVGDIVFFQAGEPAMVNAALGNLRVHLG 432

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I  N F F W+ +FP +E++EEEK+    H+PFT P  G   +  +D     A  
Sbjct: 433 NQLGLIPENTFNFLWVTEFPLFEYSEEEKRYVACHHPFTSPAPGHLEIMNSDPARALARA 492

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H +EV    F  +G + E  E +FG L +A + G PPHGG+A 
Sbjct: 493 YDMVLNGNEVGGGSIRIHSAEVQRHMFQALGFTPEQAEAQFGFLIQALEHGAPPHGGLAF 552

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           G+DR+VMLL GA ++R+V  FP +Q    L+  +PSTVS  QLRELGLR+ E  K+  K
Sbjct: 553 GLDRLVMLLSGASSIRDVIAFPKTQKATCLMTEAPSTVSARQLRELGLRLRETDKEAAK 611


>gi|261418412|ref|YP_003252094.1| aspartyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767629|ref|YP_004133130.1| aspartyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374869|gb|ACX77612.1| aspartyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112495|gb|ADU94987.1| aspartyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 590

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 250/592 (42%), Positives = 367/592 (61%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+ CG++  + VG  V L GWV + R  GG+IF+D+RD  GI QVVA+PD  +     A
Sbjct: 3   RTYYCGEVPETAVGERVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVASPDVSAEALAAA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VRSE+VL ++G V++R+ ET+N NI TG+IE+ A++IEI++ A+  P  +  + +  E
Sbjct: 63  ERVRSEYVLSVEGTVVARAPETVNPNIATGRIEIQAERIEIINEAKTPPFSISDDTDAAE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + + +  R +I  ++R  + +E F+E  TP+LT S+PEGARD+LV
Sbjct: 123 DVRLKYRYLDLRRPVMFQTLALRHKITKTVRDFLDSERFLEIETPMLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  G +RY+QIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 183 PSRVHPGEFYALPQSPQIFKQLLMVGGVERYYQIARCFRDEDLRADRQP-EFTQIDIEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+EQ+DI++  E ++  V +  + G  +   F RI YD+A+  YG+DKPD+R  + + +V
Sbjct: 242 FIEQEDIIDLTERMMAAVVKA-AKGIDIPRPFPRITYDEAMSCYGSDKPDIRFGLELVDV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E    S F+VF++  +V  G +V AI AKG     +R   D + E+A   G  GLA++ 
Sbjct: 301 SEIVRDSAFQVFAR--AVKEGGQVKAINAKGAAPRYSRKDIDALGEFAGRYGAKGLAWLK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              +E       GP+AK        A+R  L ++DGD   F+A +     +     R  +
Sbjct: 359 AEGEEL-----KGPIAKFFTDEEQAALRRALAVEDGDLLLFVADEKAIVAAALGALRLKL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+     F W+ D+P  E++EEE +   AH+PFTMP      L   +  +++A 
Sbjct: 414 GKELGLIDEAKLAFLWVTDWPLLEYDEEEGRYYAAHHPFTMPVRDDIPLLETNPSAVRAQ 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R    +V  + F  +G S+E    +FG L  AF+ G PPHGGIA
Sbjct: 474 AYDLVLNGYELGGGSLRIFERDVQEKMFRALGFSEEEARRQFGFLLEAFEYGTPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL G  N+R+   FP + +   LL  +P  VS +QL EL L +V
Sbjct: 534 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPGPVSDKQLEELHLAVV 585


>gi|78043789|ref|YP_361017.1| aspartyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|97196601|sp|Q3AA17|SYD_CARHZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|77995904|gb|ABB14803.1| aspartyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 592

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 246/590 (41%), Positives = 364/590 (61%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           R+H CG+L     G  V L+GWV R R HGG+IF+D+RD  GI QVV +PD     F +A
Sbjct: 4   RSHYCGELRKEHAGQKVILNGWVQRRRDHGGLIFVDLRDRSGIVQVVFSPDVDLEAFRVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VR+E+VL I+G V  R   T N N++TG++E+ A K+E+L+ A+  P  +    +  E
Sbjct: 64  EAVRNEYVLAIEGTVRLRPEGTENPNLLTGEVEVYASKVEVLNKAKTPPFYIEDGIDVDE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLRR  + + +  R +   ++R  +    F E  TP+LT S+PEGARDFLV
Sbjct: 124 QVRLRYRYLDLRRPEMQRALELRHKAAKAVRDFLDRHGFWEIETPMLTKSTPEGARDFLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQ+LM +G +RYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 184 PSRLNPGKFYALPQSPQIFKQILMVAGMERYFQIVRCFRDEDLRADRQP-EFTQIDIEMS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++DI++ ME ++  VF+E + G  V   F RI Y +A+ +YGTDKPDLR  + + +V
Sbjct: 243 FIDREDIMSLMEEMIAYVFKE-AIGVEVKTPFKRISYQEAMLKYGTDKPDLRFGLEITDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE     EF+VF  +   + G  +  + AKG  G +R   D + ++  + G  GLAY+  
Sbjct: 302 TELVKDVEFKVFQTV--AHAGGVIRGLNAKGCAGFSRKDLDDLTKFVGNFGAKGLAYLIL 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             +E  +     P+AK        A+   L  + GD  FF+A  P        + R H+A
Sbjct: 360 TPEEVKS-----PIAKFFKEEELRALINALQGEPGDILFFVADKPEVAAQALGNLRLHLA 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG+I  N F F W++DFP  E++ EEK+    H+PFT P      L   + L ++A  
Sbjct: 415 ERLGLIPENEFNFLWVIDFPLLEYDNEEKRFVAMHHPFTAPMDEDLPLMDENPLLVRAKA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  ++  + F  +G+S+E  + +FG +  AF+ G PPHGGIA 
Sbjct: 475 YDMVLNGVEIGGGSIRIHRRDIQEKMFKLIGLSEEEAKEKFGFMLEAFEYGTPPHGGIAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR+VML+ G +++R+V  FP +Q+  DL++G+P+ V   QL+EL +++
Sbjct: 535 GFDRLVMLMAGRESIRDVIAFPKTQSATDLMVGAPNVVERRQLKELHIKV 584


>gi|57234484|ref|YP_181449.1| aspartyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|97196655|sp|Q3Z8K0|SYD_DEHE1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|57224932|gb|AAW39989.1| aspartyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 598

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 250/596 (41%), Positives = 363/596 (60%), Gaps = 14/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           +THSC  L   ++G+ V L+GWVHR R HGG+IF+D+RD  GI QVV NP+  +AC +I 
Sbjct: 3   KTHSCA-LTQENIGTEVTLAGWVHRRRDHGGVIFIDLRDREGIVQVVFNPEQSAACLDIG 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +RSE+VL + G V  R A T N+ +++G +E+ A+  +IL+ A+  P  +  E E  E
Sbjct: 62  KELRSEYVLQVKGTVSHRPAGTENSRMLSGLVEVVAEGAKILNTAKTPPFYINEEVEVDE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LD+RR  +  N++ R + ++ MR  +    FIE  TPIL  S+PEGARD+LV
Sbjct: 122 SLRLKYRYLDIRRQGMKNNLIIRHKTVSFMRQFLNDRGFIEIETPILIKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQQ KQLLM +G ++Y+Q+A CFRDED R+DR P EF QLDMEMS
Sbjct: 182 PSRLFPGQFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQP-EFTQLDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++D++  ME++  G+          +  F RI + DA+ +YG DKPDLR  + + ++
Sbjct: 241 FVDENDMMQLMEDLFTGLVASVRPDMKYNKKFPRISFADAMEKYGCDKPDLRFGMELADI 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+    S F VF  + +   G  + AI A G GG N++  + +   A+  G  GL  I  
Sbjct: 301 TDIGASSAFGVFKNVAA--QGGAIKAISAPGCGGYNKSQQEELINLAKKYGAAGLVPISL 358

Query: 362 RLDESGNVAGM------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
              ESG +  +         AK+L +   + I  R   + G     +AG      S   +
Sbjct: 359 GA-ESGELKDLTMEMVKSVSAKYLTLEEIKTIAERSGAKPGGLILIVAGARKMVNSVLGE 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            RNH+A +L + + N   F +++DFP ++W+EE K+ D  H+PFT P      L   D  
Sbjct: 418 MRNHLAAKLDLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLESDLPLMDTDPA 477

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + +  YD+VCNG+EIA G IR H +++  + F  +G + E ++ RFG L  AF+ G PP
Sbjct: 478 RVGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFHLLGYNNEQIDERFGHLLEAFEFGAPP 537

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG+A GIDR VMLL G  ++REV  FP +Q   DLL G+PS V  +Q+R+L +RI
Sbjct: 538 HGGVAPGIDRFVMLLAGETSIREVIPFPKNQAAQDLLFGAPSVVDDKQIRDLHIRI 593


>gi|315645806|ref|ZP_07898927.1| aspartyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315278567|gb|EFU41881.1| aspartyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 591

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 247/594 (41%), Positives = 356/594 (59%), Gaps = 12/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG L  + +G  V L+GWV   R  GG++F+D+RD  GI Q+V NPD       +A
Sbjct: 3   RTHQCGHLTTAHIGENVTLNGWVQTRRDLGGVLFIDLRDRSGIMQIVFNPDFSGEALAVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VRSE+VL + G V+ R  ET N N+ TG+IE+    IE+L+ A+  P  +    E  E
Sbjct: 63  DKVRSEFVLAVSGKVVKRDPETFNPNLPTGEIEVQVTNIEVLNAAKTPPFFIEDGVEVDE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + K ++ R++     R  +  E F++  TPILT S+PEGARD+LV
Sbjct: 123 QLRLKYRYLDLRRPEMQKTLMLRSKASKIFRDFLDGEGFVDVETPILTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G F+ALPQ+PQ YKQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVHPGEFFALPQSPQIYKQLLMVSGIERYYQIARCFRDEDLRADRQP-EFTQVDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+E+DD+L  ME ++  +F+E + G  ++  F RI + +A+ +YG+DKPDLR  + +  +
Sbjct: 242 FLERDDLLTMMEQLMVKLFKE-TAGVELATPFQRISHAEAMSKYGSDKPDLRFGLELIEM 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            +    S  +VFS +  +  G EV  + AKG G   R   D +  +A   G  GLA+I  
Sbjct: 301 NDIVTSSGVKVFSSV--IEKGGEVKCLNAKGCGTWTRKEIDDLGPYAARYGAKGLAWIQV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +  E       GP+ K  +    EA+R R   +DGD   F A +           R  I 
Sbjct: 359 KEGEF-----KGPIVKFFSEEEIEAVRERTGAEDGDLLLFSADNKKVVADVLGALRLKIG 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++LG+I+ N ++F W++DFP   ++E+ K+    H+PFT P+     L   D L+++A  
Sbjct: 414 RQLGLIDDNEYKFAWVLDFPLLSYDEDAKRYVAEHHPFTRPKHEDLELLDTDPLAVRAEA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  EV  + F+ +G+S E    +FG L  AF+ G PPHGGIA 
Sbjct: 474 YDIVLNGYEVGGGSMRIYQREVQEKMFAALGLSPEEAHEKFGFLLDAFEYGTPPHGGIAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G DR+VMLL G  N+RE   FP + +  DLLM +PS V   QL +L +++ + P
Sbjct: 534 GFDRLVMLLAGRTNLRETIAFPKTASATDLLMDAPSQVDGGQLEQLHIKLAKKP 587


>gi|167037449|ref|YP_001665027.1| aspartyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115863|ref|YP_004186022.1| aspartyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|238687695|sp|B0K978|SYD_THEP3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166856283|gb|ABY94691.1| aspartyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928954|gb|ADV79639.1| aspartyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 592

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 256/595 (43%), Positives = 362/595 (60%), Gaps = 22/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L V DV   V + GWV R R HGG++F+D+RD  GI QVV + +  S  FE  
Sbjct: 10  RTHMCGELTVEDVDKSVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFSNEVSSEAFEKV 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +SVRSE+VL I+G V+ R+ E +N  I TG+IE+ A  ++ILS +E  P P+       E
Sbjct: 70  QSVRSEYVLAIEGKVVKRAPENVNPKISTGEIEIYANTLKILSKSETPPFPIEDRSNVSE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR ++ +N++ R +I   +R  +    FIE  TP+L  S+PEGARD+LV
Sbjct: 130 AIRLKYRYLDLRRPSMQQNLMTRFKITKVVRDFLNRNGFIEIETPLLIKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRIYPGKFYALPQSPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE +D+L   E ++  +F+E + G  V   F R+ Y +++ R+GTDKPDLR  + + ++
Sbjct: 249 FVEVEDVLKINEKMIAEIFKE-TLGIDVPIPFKRLSYQESMERFGTDKPDLRFGMELKDL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++    SEF VF   L  N    V  I  KG     R   D + E+A++ G  GL +I  
Sbjct: 308 SDIVAQSEFNVFKTALKNNGS--VRGINVKGAASMPRRQLDELVEFAKTYGAKGLLWIQV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA-GDPLKFCSFAADARNHI 420
              E  +     P  K L+    + I  RL+ + GD    +A  D + F + A     H+
Sbjct: 366 FEKEVKS-----PATKFLSEEEMKKILERLEAEAGDLLLIVADKDEIVFDTLA-----HL 415

Query: 421 AQELG----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             ELG    +I+ N +EF WI+DFP  E++E EK+    H+PFT P+     L   + L 
Sbjct: 416 RLELGKRFNLIDENKYEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEPLK 475

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD+V NG EI  G IR H +E+  + F  +G S+E    RFG L  AF+ G PPH
Sbjct: 476 VRAKAYDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFKYGAPPH 535

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GGIA G+DR+ M++ G+  +R+V  FP +QN   L+  +PS VS EQL+EL +++
Sbjct: 536 GGIAYGLDRLAMIITGSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 590


>gi|326390138|ref|ZP_08211699.1| aspartyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325993786|gb|EGD52217.1| aspartyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 592

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 256/595 (43%), Positives = 362/595 (60%), Gaps = 22/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L V DV   V + GWV R R HGG++F+D+RD  GI QVV + +  S  FE  
Sbjct: 10  RTHMCGELTVEDVDKSVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFSNEVSSEAFEKV 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +SVRSE+VL I+G V+ R+ E +N  I TG+IE+ A  ++ILS +E  P P+       E
Sbjct: 70  QSVRSEYVLAIEGKVVKRAPENVNPKISTGEIEIYANTLKILSKSETPPFPIEDRSNVSE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR ++ +N++ R +I   +R  +    FIE  TP+L  S+PEGARD+LV
Sbjct: 130 AIRLKYRYLDLRRPSMQQNLMTRFKITKVVRDFLNRNGFIEIETPLLIKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRIYPGKFYALPQSPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE +D+L   E ++  +F+E + G  V   F R+ Y +++ R+GTDKPDLR  + + ++
Sbjct: 249 FVEVEDVLKINEKMIAEIFKE-TLGIDVPIPFKRLSYQESMERFGTDKPDLRFGMELKDL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++    SEF VF   L  N    V  I  KG     R   D + E+A++ G  GL +I  
Sbjct: 308 SDIVAQSEFNVFKNALKNNGS--VRGINVKGAASMPRRQLDELVEFAKTYGAKGLLWIQV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA-GDPLKFCSFAADARNHI 420
              E  +     P  K L+    + I  RL+ + GD    +A  D + F + A     H+
Sbjct: 366 FEKEVKS-----PATKFLSEEEMKKILERLEAEAGDLLLIVADKDEIVFDTLA-----HL 415

Query: 421 AQELG----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             ELG    +I+ N +EF WI+DFP  E++E EK+    H+PFT P+     L   + L 
Sbjct: 416 RLELGKRFNLIDENKYEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEPLK 475

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD+V NG EI  G IR H +E+  + F  +G S+E    RFG L  AF+ G PPH
Sbjct: 476 VRAKAYDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFKYGAPPH 535

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GGIA G+DR+ M++ G+  +R+V  FP +QN   L+  +PS VS EQL+EL +++
Sbjct: 536 GGIAYGLDRLAMIITGSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 590


>gi|154496108|ref|ZP_02034804.1| hypothetical protein BACCAP_00392 [Bacteroides capillosus ATCC
           29799]
 gi|150274663|gb|EDN01727.1| hypothetical protein BACCAP_00392 [Bacteroides capillosus ATCC
           29799]
          Length = 582

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 258/583 (44%), Positives = 356/583 (61%), Gaps = 25/583 (4%)

Query: 17  VGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VG  V L+G++   R  G  + F  +RD YG TQVVA  +     I K++  E  + + G
Sbjct: 4   VGQTVTLAGFLENFREVGASLGFAVLRDFYGTTQVVAETEEMVKTI-KALNKESTIQVTG 62

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFLDL 133
           +V  R ++  N  + TG IE+  +KIE+L      ELP P+   RE  ES R KYR+LDL
Sbjct: 63  VVRERDSK--NPKLPTGDIEVVPEKIEVLGRCRHNELPFPINRSREADESARLKYRYLDL 120

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R   +  NIV R ++++++R  M A  F+E +TPILTASSPEGARD+LVPSR + G FYA
Sbjct: 121 RNPEVKNNIVLRCQVVSALRQAMTAHGFMEITTPILTASSPEGARDYLVPSRKHPGKFYA 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           LPQAPQQ+KQLLMASGFD+YFQIAPCFRDED R DR PGEFYQLDMEM+F +Q+D+   +
Sbjct: 181 LPQAPQQFKQLLMASGFDKYFQIAPCFRDEDARGDRSPGEFYQLDMEMAFADQEDVFTVL 240

Query: 254 ENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           E+VL  +F ++   +T S+  F RI Y +A+  YG+DKPDLR  +   + TE      F 
Sbjct: 241 EDVLPPIFAKYGKYDTASSAPFKRIPYLEAMETYGSDKPDLRIDLTAQDATEALGACGFG 300

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
            F        G  V A+   G    R   D++   A  + Q G    ++R DE+G +  +
Sbjct: 301 PFE-------GNTVKAVKVTGFSATRKQIDKL--CADVEVQSGGKVYWFRYDENGEI--V 349

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL-GIINCNC 431
           G +AK +  +  +A+   L ++ G      AG  L     A      +A       +   
Sbjct: 350 GGIAKFVQPIK-DAVVAALGLEKGTFVGLTAGKKLSAQKTAGVLIKMLAPLCPDHFHKET 408

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN-----DLLSIKAFQYDLVC 486
           +EFCWI+DFP YE  EE  +++F HNPF+MP GG+E LK       D LSI AFQYDLVC
Sbjct: 409 YEFCWIVDFPMYEIGEESGELEFCHNPFSMPNGGLEVLKKAAAGEVDPLSITAFQYDLVC 468

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           NG E++SG +RNH  E+M++AF  V + ++ V+++F  +Y AF  G PPH GIA G+DR+
Sbjct: 469 NGVELSSGAVRNHDPEIMIEAFQLVRLGEDDVKSKFPAMYNAFTYGAPPHAGIAPGVDRM 528

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           VMLL G  ++RE+  FPM++N  DL+M +PS V+ +QL EL +
Sbjct: 529 VMLLAGEDSIREIIPFPMNKNAQDLMMNAPSFVTQKQLDELNI 571


>gi|307265228|ref|ZP_07546787.1| aspartyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919850|gb|EFN50065.1| aspartyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 592

 Score =  465 bits (1197), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 252/590 (42%), Positives = 357/590 (60%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L V DV   V + GWV R R HGG++F+D+RD  GI QVV + +  S  FE  
Sbjct: 10  RTHMCGELTVEDVDKSVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFSNEVSSEAFEKV 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +SVRSE+VL I+G V+ R+ E +N  I TG+IE+ A  ++ILS +E  P P+       E
Sbjct: 70  QSVRSEYVLAIEGKVVKRAPENVNPKISTGEIEIYANTLKILSKSETPPFPIEDRSNVSE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR ++ +N++ R +I   +R  +    FIE  TP+L  S+PEGARD+LV
Sbjct: 130 AIRLKYRYLDLRRPSMQQNLMTRFKITKVVRDFLNRNGFIEIETPLLIKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRIYPGKFYALPQSPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE +D+L   E ++  +F+E + G  V   F R+ Y +++ R+GTDKPDLR  + + ++
Sbjct: 249 FVEVEDVLKINEKMIAEIFKE-TLGIDVPIPFKRLSYQESMERFGTDKPDLRFGMELKDL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++    SEF VF   L  N G  V  I  KG     R   D + E+A++ G  GL +I  
Sbjct: 308 SDIVAQSEFNVFKNALK-NSG-SVRGINVKGAASMPRRQLDELVEFAKTYGAKGLLWIQV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E  +     P  K L+    + I  RL+ + GD    +A          A  R  + 
Sbjct: 366 FEKEVKS-----PATKFLSEEEMKKILERLEAEAGDLLLIVADKDGIVFDTLAHLRLELG 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   +I+ N +EF WI+DFP  E++E EK+    H+PFT P+     L   + L ++A  
Sbjct: 421 KRFNLIDENKYEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEPLKVRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H +E+  + F  +G S+E    RFG L  AF+ G PPHGGIA 
Sbjct: 481 YDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFKYGAPPHGGIAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+ M++ G+  +R+V  FP +QN   L+  +PS VS EQL+EL +++
Sbjct: 541 GLDRLAMIITGSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 590


>gi|220903296|ref|YP_002478608.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219867595|gb|ACL47930.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 627

 Score =  465 bits (1197), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 246/594 (41%), Positives = 361/594 (60%), Gaps = 14/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEI 61
           +R+ +CG+L +++ G  V L GWV   R HGG+IF+D+RD  G+TQVV +PD+A    + 
Sbjct: 30  HRSQTCGELTLANNGQEVCLMGWVQYRRDHGGLIFVDLRDRSGLTQVVFSPDAAPEAHKN 89

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+VL I GLV  R    +N N++TG+IE+   + ++L+ ++  P  +    +  
Sbjct: 90  AHILRSEYVLAIKGLVRPRPEGMVNPNMVTGEIEVVVTEWKLLNTSKTPPFTIENRCDAG 149

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R  +R+LDLRR  +  N+  R ++   +R  +  + F+E  TP+LT S+PEGARDFL
Sbjct: 150 ENLRLAWRYLDLRRPRMQDNLRLRHKVAQCIRRHLDEDGFVEVETPVLTKSTPEGARDFL 209

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM +G DRYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 210 VPSRLNTGEFYALPQSPQLFKQLLMVAGMDRYFQIVRCFRDEDLRADRQP-EFTQVDIEM 268

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF +++ ++   E ++  VF +   G  +S  F R+ +D+A+ RYG DKPD R  + + +
Sbjct: 269 SFADEETVMGMAEKLMARVFRDVM-GKELSLPFPRMPWDEAMARYGVDKPDTRFGLELVD 327

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE    S F++F+      P  +   +P  G    R   D   E+ +  G  GLA+I  
Sbjct: 328 ITEIVRGSGFKLFA----TAPLVKGMRVPG-GESMTRKEIDAFTEFVKIYGAQGLAWIKI 382

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE        P+AK L+    + I   LD+Q GD  FF AG+P    +   + R H+A
Sbjct: 383 KADE-----WQSPIAKFLSDEERKGIAAALDLQVGDIVFFQAGEPGMVNAALGNLRVHLA 437

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             + +I  N F F W+ DFP YE++EEEK+    H+PFT P  G   L  +D    +A  
Sbjct: 438 DHMNLIPENTFNFLWVTDFPLYEYDEEEKRYVACHHPFTSPAPGHMELMTSDPARARARA 497

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  EV  + F  +G + E  E++FG L +A + G PPHGG+A 
Sbjct: 498 YDMVLNGSEVGGGSIRIHSGEVQRRMFEALGFTPEQAESQFGFLIQALEHGAPPHGGLAF 557

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR++MLL GA ++R+V  FP +Q    L+  +PS V+ +QLRELGLR+ E P
Sbjct: 558 GLDRLIMLLAGASSIRDVIAFPKTQKATCLMTDAPSPVAAKQLRELGLRLREQP 611


>gi|253699951|ref|YP_003021140.1| aspartyl-tRNA synthetase [Geobacter sp. M21]
 gi|259511861|sp|C6E3W7|SYD_GEOSM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|251774801|gb|ACT17382.1| aspartyl-tRNA synthetase [Geobacter sp. M21]
          Length = 593

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 251/592 (42%), Positives = 357/592 (60%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           RT  CG+L    +G  V L GWV + R HGG+IF+D+RD  GI+Q+V +P+  C E    
Sbjct: 10  RTSYCGELRGGHIGQEVTLMGWVSKRRDHGGLIFVDLRDRDGISQIVFDPER-CAEAHAK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+SVR+E+VL I G V +R   T+N  + TG+IE+   + ++L+ ++ LP  + G  +  
Sbjct: 69  AESVRNEYVLAIKGTVAARPEGTVNPKMKTGEIEVLVTECKLLNPSKALPFTLDGFVDVN 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLR  TL +N++ R+++    R  +    FIE  TP LT S+PEGARDFL
Sbjct: 129 ENIRLKYRYLDLRTGTLQQNLILRSKVAQLTRSYLSDNGFIELETPFLTKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N+G FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 189 VPSRINKGEFYALPQSPQLFKQILMVSGFDRYFQIVRCFRDEDLRADRQP-EFTQIDCEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++++DI+  ME ++  +F E + G  V     R+ Y +AIRR+G D PDLR  + +  
Sbjct: 248 SFIDREDIITVMEGLMARIFTE-AKGVKVELPIERMTYQEAIRRFGVDNPDLRFGLELVE 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +++   +S F+VF+ +  VN G  V  +  KG G  +R   D + E+A+  G  GLAY+ 
Sbjct: 307 LSDIVKNSGFKVFADV--VNGGGIVKGMNVKGAGAMSRKEIDDLTEFAKIYGAKGLAYV- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++   G      P+AK         +    D ++GD   F+A  P          RNH+
Sbjct: 364 -KMTAEG---WQSPIAKFFTPEEIATMDKAFDAKEGDLLLFVADKPKVVNDSLGKLRNHL 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ++G+ + N F F WI DFP  EW+EE K+    H+PFT P         +D    +A 
Sbjct: 420 AAKMGLTDPNVFRFVWITDFPLLEWDEEAKRWAAVHHPFTAPMDEDLQYVESDPGRCRAK 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG EI  G IR H  EV    F  +G+S+E   ++FG L  A + G PPHGGIA
Sbjct: 480 AYDLVLNGNEIGGGSIRIHQEEVQSLMFKMLGLSEENARSKFGFLLDALEYGTPPHGGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR++ML+ G+ ++R+V  FP +Q    L+  +PS V   QLRELG+R+ 
Sbjct: 540 FGLDRLMMLITGSDSIRDVIAFPKTQKGACLMSDAPSGVDALQLRELGIRLA 591


>gi|291533404|emb|CBL06517.1| aspartyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 600

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 249/597 (41%), Positives = 363/597 (60%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           RTH CG+L  ++ G  V L GWV   R HGG+IF+D+RD  G+ Q+V   D   +  F  
Sbjct: 9   RTHHCGELRATNEGQEVVLCGWVSHRRDHGGLIFIDLRDRSGLVQLVFAEDKIGADQFPK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V  R  ETIN N+ TG+IE+ A+++ IL+ A   P  +    +  
Sbjct: 69  AESLRSEFVVAVRGKVSLRDKETINPNMETGEIEIYAEELRILNKALTPPFYIQDGIDVD 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  + KNI+ R R+   MR       F+E  TP+LT S+PEGARD+L
Sbjct: 129 ENVRLKYRYLDLRRPEMQKNIMLRHRVTKLMRDYFDEHGFLEIETPMLTKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ +KQLLM +G+++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 189 VPSRVNPGKFYALPQSPQIFKQLLMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDIEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QD ILN ME ++ G+FE+ + G  V   FLR+ +D+A+ RYG+DKPD+R  + + +
Sbjct: 248 SFVDQDYILNLMEGLVSGLFEK-TIGEKVQTPFLRMTWDEAMERYGSDKPDIRFGMELMD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           ++E+   S+F+VF  +L  + G +V  I   G     R   D + E+A+  G  GLA+I 
Sbjct: 307 ISEYVKGSDFKVFKSVL--DNGGQVKVIKVDGYANIPRRELDGLVEYAQRYGAKGLAWIQ 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E  +     P  K  +    + I+   + Q GD    +A  PL       + R  +
Sbjct: 365 YTETEIKS-----PFKKFYSEETFQKIKEATNAQTGDLLLVVADKPLVVAQALGELRLEM 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +  G+IN N ++F W++DFP +E++EE K+    H+PFT P+         D   +KA 
Sbjct: 420 GRRRGLINENEYKFLWVVDFPMFEYDEENKRWKAMHHPFTAPRDEDVQYLTTDPGRVKAK 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R + S+   + F  +G++ E    +FG +  AF+ G PPHGG+A
Sbjct: 480 AYDMVLNGVEIGGGSLRIYNSDTQEKVFEAIGLTPEQAHEKFGFMLDAFKYGTPPHGGLA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML+    ++R+V  FP +Q+   L+  +PS V  +QLREL +R    PKK
Sbjct: 540 FGLDRMVMLMAKRNSIRDVIPFPKTQSAGCLMTQAPSEVDAKQLRELSIRTAVAPKK 596


>gi|196039236|ref|ZP_03106542.1| aspartate--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029863|gb|EDX68464.1| aspartate--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 591

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/591 (41%), Positives = 360/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    EIA
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E+F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEDFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG  G  +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAAGKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK        A+   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEEANALMTTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|229543724|ref|ZP_04432784.1| aspartyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229328144|gb|EEN93819.1| aspartyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 590

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 246/596 (41%), Positives = 362/596 (60%), Gaps = 15/596 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M   R++ CGD+    +G  V L GWV R R  GG+IF+D+RD  GI Q+V N       
Sbjct: 1   MMEGRSYYCGDVTEQQIGEKVVLKGWVQRRRDLGGLIFIDLRDRAGIVQIVFNTAVSEEA 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A+ VR+E+VL ++G V++RS  T+N N+ TG+IE+ A ++ I++ A+  P  +  E 
Sbjct: 61  FKLAEKVRNEYVLEVEGKVIARSENTVNPNLKTGKIEIQADRLAIINNAKTPPFMIENET 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R KYR+LDLRR  + + +  R  I  S+R  +  E FI+  TP+LT S+PEGAR
Sbjct: 121 GVAEDVRLKYRYLDLRRPVMFETMKMRHAITKSIRGFLDEEGFIDVETPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV+ G FYALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D
Sbjct: 181 DYLVPSRVHPGEFYALPQSPQLFKQLLMISGFDRYYQIARCFRDEDLRADRQP-EFTQID 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ Q+DIL   E +++ + +E  N + +     R+ Y++A+ RYG+DKPD R  + 
Sbjct: 240 IETSFMSQEDILTMTEKMIKRLMKEVKNID-IETPLPRLTYEEAVNRYGSDKPDTRFGME 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356
           + +V+E   ++ F+VF+   +V  G +V AI AKG     +R   D + E+A   G  GL
Sbjct: 299 LVDVSEIVQNAGFKVFAS--AVTSGGQVKAINAKGAASKYSRKDIDALGEFAARYGAKGL 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A++     ++ N    GP+AK         +    + + GD   F+A             
Sbjct: 357 AWL-----KAENEGLKGPIAKFFTEAEQSQLAAATNAETGDLLLFVADKKSVVADALGAL 411

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLL 475
           RN + +ELG+I+ + F F W+ D+P  E++E+  +   AH+PFTMP +  +E L+  D  
Sbjct: 412 RNKLGKELGLIDESKFNFLWVTDWPLLEYDEDAGRYTAAHHPFTMPFEEDIEKLE-TDPA 470

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           S+KA  YD+V NG+E+  G +R +  +V  + F  +G SKE  +++FG L  AF  G PP
Sbjct: 471 SVKAQAYDIVLNGYELGGGSLRIYKRDVQEKMFKALGFSKEQAQSQFGFLLDAFDYGTPP 530

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGGIA G+DRIVMLL G  N+R+   FP + +   LL  +P  VS  QL EL L++
Sbjct: 531 HGGIALGLDRIVMLLAGRSNLRDTIAFPKTASASCLLTNAPGAVSEAQLDELQLKL 586


>gi|296133426|ref|YP_003640673.1| aspartyl-tRNA synthetase [Thermincola sp. JR]
 gi|296032004|gb|ADG82772.1| aspartyl-tRNA synthetase [Thermincola potens JR]
          Length = 595

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 251/600 (41%), Positives = 372/600 (62%), Gaps = 22/600 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L  +++G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD     F  A
Sbjct: 10  RTHHCGELRKTNIGEEVVLMGWVQRRRDHGGLIFVDLRDRSGLVQVVFSPDVDKEAFAKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +RSE+VL + G V++R   T+N N+ TG+I+++  ++ IL+ A+  P  +  + +  E
Sbjct: 70  EIIRSEYVLAVRGQVVARPEGTVNENLPTGEIDVNCLEVRILNKAKTPPFYIEEDIDVDE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + +N++ R +   ++R  +    F+E  TP+LT S+PEGARD+LV
Sbjct: 130 NLRLKYRYLDLRRPDMQRNMILRHKTTMAIREFLDKAGFLEIETPMLTKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQ+LM +G ++YFQI  CFRDED R+DR P EF Q+DMEMS
Sbjct: 190 PSRVNPGKFYALPQSPQIFKQILMVAGMEKYFQIVRCFRDEDLRADRQP-EFTQVDMEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ DD+L   E +L   F   + G  ++  F R+ Y +AI RYG+DKPDLR  + + + 
Sbjct: 249 FVDIDDVLALTEEMLAHAFR--AAGIEITTPFERLTYKEAIDRYGSDKPDLRFGLELKDF 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+    S+F+VF+ + +   G +V  I AKG  G +R   D + ++    G  GLAYI  
Sbjct: 307 TDIVKDSDFKVFASVAA--GGGQVKGINAKGCAGFSRKEIDDLTQFVGIYGAKGLAYIV- 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH-- 419
            + E G  +   P+ K       + I  R + + GD  FF+A  P    S  ADA  H  
Sbjct: 364 -VTEDGLKS---PILKFFKEEEIKVILERFEAEPGDLLFFVADKP----SIVADALGHLR 415

Query: 420 --IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ L +I+   F+F WI++FP  E++EEE++    H+PFT P      L  +D L +
Sbjct: 416 VELARRLNLIDDKVFKFVWIVEFPLLEYDEEERRYVAIHHPFTSPMDEDIPLLDSDPLVV 475

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H  +V  + F+ +G+S E    +FG +  AF+ G PPHG
Sbjct: 476 RAKAYDVVLNGVELGGGSIRIHSRQVQEKMFTLLGLSPEEAIEKFGFMLEAFEYGTPPHG 535

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPK 596
           GIA G+DR+VML+ G  ++R+V  FP +Q+  DL+  +PS V+ +QLREL +++ V  PK
Sbjct: 536 GIAFGLDRMVMLMAGRDSIRDVIAFPKTQSATDLMTQAPSEVTAKQLRELHIKLNVVAPK 595


>gi|160903057|ref|YP_001568638.1| aspartyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160360701|gb|ABX32315.1| aspartyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 599

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/594 (40%), Positives = 363/594 (61%), Gaps = 12/594 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSAC 58
           M + RTH+CG+L  +D+   V L+GW+ R+R  GGIIF+ IRD YG TQ V  ++ +   
Sbjct: 1   MFQKRTHTCGELNENDIDKIVILNGWIDRIRDLGGIIFVLIRDRYGKTQAVFDSSDNYTL 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           ++ A  +++E+V+ I G V  R  +  N N++TG IE+ A  +EILS +E  P+ V  E 
Sbjct: 61  YQKALKLKNEYVVSIQGKVRVRPEKDKNPNMVTGNIEILATNLEILSESETPPIYVNIEE 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E++R KYR+LDLR++ + +N++ R +++   R  + AE F+E  TP LT S+PEGAR
Sbjct: 121 DISENLRLKYRYLDLRKERMQRNLILRHKVMKITRDTLSAEGFLEIETPYLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR+  G+FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D
Sbjct: 181 DFLVPSRLKPGNFYALPQSPQLFKQLLMVSGFDKYFQIARCFRDEDFRADRQP-EFTQID 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SFVE++DI    E +++ +FE+  N N +   F +  YD+ I++YG+DKPD+R  + 
Sbjct: 240 IEQSFVEKEDIFALTEKLIKEIFEKSLNYNGLEIPFQKYTYDEVIQKYGSDKPDIRYGME 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
             ++T +F ++E       +      + + +P +    +R   D + E+A+ QG  GL +
Sbjct: 300 FIDLTAYFQNTEANFIKNGIDKGLILKGFIVPDRSNNFSRKKFDDLTEFAKEQGSSGLIW 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I    +   N+      AK +NI+    I     M++GD  F I  +  K        R 
Sbjct: 360 IACDKEMRSNIKKAA--AKEINILVERGI-----MKEGDVLFAILEETDKIDQILGQLRI 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSI 477
            + +E      + F   W+ DFP + WNEEE++I   H+PFTMP    +   +  D L I
Sbjct: 413 KMIKE-EFEKKSGFSIIWVTDFPMFSWNEEEQRIVAEHHPFTMPNLDDLAKYENKDPLKI 471

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K+  YDLV NG+EIASG IR H  +V  + F  +G+SKE  + +FG L  AF+ G PPHG
Sbjct: 472 KSQSYDLVINGYEIASGSIRIHKQDVQEKVFDILGLSKEEAQEKFGFLLEAFKYGAPPHG 531

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DR+V +L+G ++++EV  FP + +  D +  +PS VS +QL EL L +
Sbjct: 532 GIAIGMDRLVSILVGEESIKEVIAFPKTASGTDPMTNAPSEVSEKQLEELHLAL 585


>gi|226311477|ref|YP_002771371.1| aspartyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226094425|dbj|BAH42867.1| aspartyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 596

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/600 (41%), Positives = 369/600 (61%), Gaps = 13/600 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           +YRT   G++  + VG  V L+GWV + R  GG+IF+D RD  GI Q+V NP+     +E
Sbjct: 4   QYRTVHGGEVTTAHVGQEVVLNGWVQKRRDLGGVIFIDFRDRTGIVQIVFNPEYNKEAWE 63

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  VRSE+VL + G V++R+ E +N  + TG++E+   +IEIL+ A+  P  +  E + 
Sbjct: 64  AADKVRSEYVLVVKGKVVNRAPEAVNPKLKTGEVEVHISEIEILNDAKTPPFLIEDEIDV 123

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + ++++ R++   + R  +   NF+E  TPIL  S+PEGARD+
Sbjct: 124 DEQVRLKYRYLDLRRPEMQRSLLLRSKAAKAFRDYLDENNFMEIETPILQKSTPEGARDY 183

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 184 LVPSRVHPGEFYALPQSPQLFKQLLMVSGLERYYQIARCFRDEDLRADRQP-EFTQVDIE 242

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  ++IL  ME ++  VF++ + G  V   F R+ Y DA+ RYG+DKPD+R  + + 
Sbjct: 243 TSFLSMEEILPMMEKMVAHVFKQ-TVGVDVPTPFPRLTYADAMARYGSDKPDVRFGMELT 301

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +V++    S+F+VF+   +V  G +V AI AKG G  +R   D + ++A   G  GLA+I
Sbjct: 302 DVSDLVATSDFKVFAA--AVAGGGQVKAINAKGCGHYSRKEADDLGKFASRYGAKGLAWI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            ++    G V   GP+AK         ++ RL +++GD   F+A  P          R+ 
Sbjct: 360 GFK---DGEVK--GPIAKFFKEEELNEMKARLAVEEGDLLLFVADKPKVVADALGALRSK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  ELG+I+ + F F W++DFP  EW+E+ K+    H+PFT P+     L   D   ++A
Sbjct: 415 LGAELGLIDQSQFAFLWVVDFPLVEWDEDAKRYVALHHPFTRPKDEDLHLFDTDPGQMRA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R    EV  + F+ +G + E    +FG L  AF+ G PPHGGI
Sbjct: 475 QAYDMVLNGYELGGGSMRIFKREVQEKMFTTLGFTPEEARKQFGFLMDAFEYGTPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL-RIVENPKKI 598
           A G+DR++MLL G  N+REV  FP + +  DL++ +P  V  +QL+EL +  IV   +K+
Sbjct: 535 ALGLDRLIMLLAGRTNLREVIAFPKTASASDLMVNAPDVVDGKQLKELSIATIVTEEEKV 594


>gi|289432555|ref|YP_003462428.1| aspartyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946275|gb|ADC73972.1| aspartyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 598

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 249/596 (41%), Positives = 362/596 (60%), Gaps = 14/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           +THSC  L   +VG+ V L+GWVHR R HGG+IF+D+RD  GI QVV NP+  +AC +I 
Sbjct: 3   KTHSCA-LTQENVGTEVTLAGWVHRRRDHGGVIFIDLRDREGIVQVVFNPEQSAACLDIG 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +RSE+VL + G+V  R A T N  + +G +E+ A   +IL+ A+  P  +  E E  E
Sbjct: 62  KELRSEYVLQVKGVVSHRPAGTENNRMPSGMVEVVAVHAKILNAAKTPPFYINEEVEVDE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LD+RR  +  N++ R + +  MR  +  + FIE  TPIL  S+PEGARD+LV
Sbjct: 122 SLRLKYRYLDIRRQGMKNNLIIRHKAVRFMREFLNDQGFIEIETPILIKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQQ KQLLM +G ++Y+Q+A CFRDED R+DR P EF QLDMEMS
Sbjct: 182 PSRLFPGKFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQP-EFTQLDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++D++  ME++  G+          +  F RI + DA+ +YG DKPDLR  + + ++
Sbjct: 241 FVDEEDMMKLMEDLFTGLVASVRPDMKYNKKFPRISFADAMEKYGCDKPDLRFGMELADI 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+    S F VF  + +   G  + AI A G GG N++  + +   A+  G  GL  I  
Sbjct: 301 TDIGASSAFGVFKNVAA--QGGAIKAISAPGCGGYNKSQHEELINLAKKYGAAGLVPISL 358

Query: 362 RLDESGNVAGM------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
            + E+G +  +         AK+L +   + I  R   + GD    +AG      +   +
Sbjct: 359 GV-ENGELKDLTMEMVKSVAAKYLALEEIKTIAERSGAKPGDLILIVAGARKMVNTVLGE 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            RN +A +L + + N   F +++DFP ++W+EE K+ D  H+PFT P      L   D  
Sbjct: 418 MRNQLAVKLNLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLESDMPLMDTDPG 477

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + +  YD+VCNG+EIA G IR H +++  + F  +G + E ++ RFG L  AF+ G PP
Sbjct: 478 RVGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFHLLGYNDEQIDERFGHLLEAFEFGAPP 537

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG+A GIDR VMLL G  ++REV  FP +Q   DLL G+PS V  +Q+R+L +RI
Sbjct: 538 HGGVAPGIDRFVMLLAGETSIREVISFPKNQAAQDLLFGAPSVVDDKQIRDLHIRI 593


>gi|229076031|ref|ZP_04209002.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228707065|gb|EEL59267.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 591

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/591 (41%), Positives = 362/591 (61%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A ++ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATRVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E+F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEDFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E  V   F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAVDCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     + +A+   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDAKALMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|229175077|ref|ZP_04302594.1| Aspartyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608373|gb|EEK65678.1| Aspartyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 591

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/591 (41%), Positives = 359/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    EIA
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPAMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E  V   F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAVGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK        A+   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEEANALMATLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLQL 585


>gi|254468835|ref|ZP_05082241.1| aspartyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087645|gb|EDZ64928.1| aspartyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 595

 Score =  462 bits (1189), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/594 (42%), Positives = 362/594 (60%), Gaps = 15/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +  S +   + L GW HR R HGG+IF+D+RD  G+ Q+V +PD+   F+IA+
Sbjct: 2   RTLYCGHVNASHIDQEIYLCGWAHRRRDHGGVIFIDLRDREGLAQIVIDPDTPEAFKIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +VRSE+VL +   V  R   T+N NI TG++E+   +IEI++ +   P  V  +    E+
Sbjct: 62  TVRSEFVLKVKCKVRKRPEGTVNKNIPTGEVEMLVSEIEIINASLTPPF-VIDDENITET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR + RF+DLRRD + KN+  R  I  S+R  +  +NFIE  TPILT S+PEGARD+LVP
Sbjct: 121 IRLENRFIDLRRDQMQKNLKVRYEITKSVRQSLDEDNFIEIETPILTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHHGEFFALPQSPQLFKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIEASF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE++D+ N    + + VF++  N + +   F  I Y +A+ RYG+DKPDLR  + +  +T
Sbjct: 240 VEEEDVKNIAAKLTQKVFKDVLNVD-LPEKFQEITYKEAMTRYGSDKPDLRVNLELIELT 298

Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI--- 359
           E     +F+VFS   +   G      IP+ G   +R+  D+  E+ R  G  GLAYI   
Sbjct: 299 EDMKDVDFKVFSTPANSTSGRVAALKIPS-GADMSRSEIDQYTEFVRIYGAKGLAYIKIN 357

Query: 360 -FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
              +L+E G      P+ K+++    +AI  +   ++GD  FF   D  K  + A  A R
Sbjct: 358 DVTKLNEEG---LQSPIVKNIHEKALKAIIEKTQAENGDLIFF-GADKEKIVNEALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             I  +  I++ + +   W++DFP +E+NE+E + D  H+PFT P+ G E L  +D  + 
Sbjct: 414 EKIGHDRKILSGDEWSILWVVDFPMFEFNEDEDRWDALHHPFTSPKDGHEKLLSSDPGAC 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YDLV NG+E+  G IR H   V  Q FS + IS E    +FG L  A Q G PPHG
Sbjct: 474 LSKAYDLVINGWEVGGGSIRIHDQSVQSQVFSALNISNEEANEKFGFLLEALQYGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR+  LL+GA+++R+V  FP +Q    LL  +P+ V  +QLREL +R+
Sbjct: 534 GLAFGLDRLTTLLVGAESIRDVIAFPKTQRAQCLLTSAPNEVDEKQLRELHIRV 587


>gi|310643535|ref|YP_003948293.1| aspartyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309248485|gb|ADO58052.1| Aspartyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 592

 Score =  462 bits (1189), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 246/594 (41%), Positives = 358/594 (60%), Gaps = 12/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           R+H CG L  + +G  V L+GWV   R  GG++F+D+RD  GI Q+V NP       +IA
Sbjct: 3   RSHQCGALTHAHIGETVTLNGWVQTRRDLGGVLFIDLRDRSGIVQIVFNPAYSGDALQIA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VRSE+VL + G V+ R AETIN+N+ TG+IE+   +IE+L+ ++  P  +    E  E
Sbjct: 63  DRVRSEYVLEVTGTVVKRDAETINSNLPTGEIEVRVTEIEVLNASKTPPFFIEDGVEVDE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LDLRR  +H+ +  R++     R  +  E+FIE  TPILT SSPEGARD+LV
Sbjct: 123 SLRLKYRYLDLRRPEMHQTLKLRSKAAKVFRDFLDGEDFIEVETPILTKSSPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G F+ALPQ+PQ YKQLLM  G +RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVHEGEFFALPQSPQLYKQLLMVGGLERYYQVARCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++QDD+L  ME ++  +F+E + G  +   F RI + +A+ +YG+DKPDLR  + + NV
Sbjct: 242 FMQQDDLLPMMERLMVKLFKE-TVGVELETPFQRITHAEAMDKYGSDKPDLRFGLELVNV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            +    S  +VF+ +  +  G EV  + AKG G  +R   D +  +A   G  GLA+I  
Sbjct: 301 NDIVATSGVKVFASV--IEKGGEVKVLNAKGCGTWSRKDIDDLGPFAARYGAKGLAWIQV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +  E       GP+ K       EA++ R   ++GD   F A +           R  I 
Sbjct: 359 KEGEF-----KGPIVKFFTPEEIEALKERTGAEEGDLLLFSADNKKVVADVLGALRLKIG 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG+I+   F+F W++DFP   ++EE+K+    H+PFT P+    +L   D   ++A  
Sbjct: 414 RHLGLIDDKKFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKEEDLALLDTDPGQVRAQA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R    E+  + F  + +  E V+++FG L  AF+ G PPHGGIA 
Sbjct: 474 YDIVLNGYEVGGGSMRIFKREIQEKMFKALNLPPEEVKDKFGYLLDAFEYGTPPHGGIAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G DR+VMLL G  N+RE   FP + +  DLLM +P+ V   QL +L +R+   P
Sbjct: 534 GFDRLVMLLAGRTNLRETIAFPKTASATDLLMDAPAEVDQAQLDQLHIRLAPKP 587


>gi|224367378|ref|YP_002601541.1| AspS [Desulfobacterium autotrophicum HRM2]
 gi|259511856|sp|C0QFI1|SYD_DESAH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|223690094|gb|ACN13377.1| AspS [Desulfobacterium autotrophicum HRM2]
          Length = 596

 Score =  462 bits (1189), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/592 (41%), Positives = 363/592 (61%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG+L V+DV + V L GWV R R HGG+IF+D RD  GITQ+V NP+        A
Sbjct: 10  RTHTCGELRVTDVDTEVTLMGWVQRRRDHGGVIFIDFRDKEGITQIVFNPEVNPEVHAKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL + G V++R  + +N  ++TG IE+   +++ILS AE     +    E  E
Sbjct: 70  QTIRSEYVLGVKGRVVNRPDDMVNPKMVTGGIEILVDELKILSRAETPAFQIEDRIEASE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR LDLRR  L +NI+ R     ++R  +    F++  TP LT S+PEGARD+LV
Sbjct: 130 TVRLKYRHLDLRRPKLQQNIIARHTASRAVRDYLNDLGFLDIETPFLTRSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+DMEMS
Sbjct: 190 PSRVNHGQFYALPQSPQLFKQMLMISGFDRYYQIVRCFRDEDLRADRQP-EFTQIDMEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV +D+I+   E +++ VF+   + + +   F RI Y ++I R+G D+PD+R  + ++++
Sbjct: 249 FVGEDEIMEITEGLIKTVFKRVRDID-LELPFQRITYAESIDRFGIDRPDMRFGLELNDL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++   ++ F+VF+ +  V  G  V AI AKG     R   D + ++A      GLA++  
Sbjct: 308 SDLVENTGFKVFASV--VKKGGLVKAINAKGCANFTRKQIDELTDFAAIYKAKGLAWVKV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D +       P+AK       +AI VRLDM+  D  FF+A +P          RN +A
Sbjct: 366 KADGTWQ----SPIAKFFTDDEKKAIEVRLDMEKDDIVFFVADNPKITNEALGQLRNELA 421

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAF 480
           + L +I+ N + F W+  FP  E++E EK+    H+PFT P +  +E L   D L++++ 
Sbjct: 422 RRLELIDNNTYRFVWVTHFPLVEYDEGEKRYQAIHHPFTAPLEEDLEKLD-TDPLNVRSR 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H +E+  +  + +GI KE   ++FG L  A   G PPHGG+A
Sbjct: 481 AYDMVLNGIEIGGGSIRIHSTELQEKVLNTLGIGKEEANDKFGFLLNALGSGTPPHGGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G DR+VMLL   +++R+V  FP +Q    LL  +PS  +  QL+EL +R+V
Sbjct: 541 FGFDRLVMLLCQEESIRDVIAFPKTQRATCLLTEAPSKAAPAQLQELSIRVV 592


>gi|222055750|ref|YP_002538112.1| aspartyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|254781734|sp|B9M1C9|SYD_GEOSF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|221565039|gb|ACM21011.1| aspartyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 593

 Score =  462 bits (1189), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/589 (41%), Positives = 353/589 (59%), Gaps = 12/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           RTH CG L   D G  V L GW HR R HGG+IF+D+RD  G+ Q+V +PD++      A
Sbjct: 10  RTHYCGTLTADDTGKEVVLMGWAHRRRDHGGLIFVDLRDREGLAQIVFDPDNSAEAHHKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++R+E+V+ + G V+ R   T+N N+ TG +E+     +ILS ++ LP  +    +  E
Sbjct: 70  EAIRNEYVVAVKGKVIPRPQGTVNTNLRTGAVEILVSACKILSRSKALPFTLDDYVDVAE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R K+R+LDLRR  L  N++ R+++    R  +    F+E  TP LT S+PEGARDFLV
Sbjct: 130 NLRLKHRYLDLRRPVLQDNLILRSKVAQVTRQYLTGNGFLELETPFLTKSTPEGARDFLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N+G FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 190 PSRINRGEFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQIDCEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++DI+  ME ++  +F +  +  +VS    R+ Y ++I R+G D PDLR  + +  +
Sbjct: 249 FIDREDIITVMEGLIARIFADVKD-MSVSLPIKRMTYAESINRFGVDNPDLRFGLELVEL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++    S F+VF+ +  V  G  V  + AKG GG +R   D + E+ +  G  GLAY+  
Sbjct: 308 SDIVKGSGFKVFADV--VAGGGIVKGLNAKGCGGMSRKEIDDLTEFVKIYGAKGLAYV-- 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++ E G      P+ K        A+      + GD   F+A  P          RN +A
Sbjct: 364 KVTEDG---WQSPITKFFTGEEISAMTKTFAAEQGDLLLFVADKPKVVNDSLGKLRNQLA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG+++ N F F WI DFP  EW+EEEK+    H+PFT P         ND    +A  
Sbjct: 421 KILGLLDKNTFNFVWITDFPLLEWDEEEKRWAAVHHPFTAPMDEDLEYVENDPGRCRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  +V    F  +G+S+E  + +FG L  A + G PPHGGIA 
Sbjct: 481 YDLVLNGNEIGGGSIRIHQEKVQSLMFKMLGLSEEDAKAKFGFLLDALEYGTPPHGGIAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR++MLL G+ ++R+V  FP +Q    L+  +PS V ++QLRELGL+
Sbjct: 541 GLDRLIMLLTGSDSIRDVIAFPKTQKGACLMSEAPSPVDLKQLRELGLK 589


>gi|312898874|ref|ZP_07758262.1| aspartyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620036|gb|EFQ03608.1| aspartyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 599

 Score =  462 bits (1188), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/593 (41%), Positives = 358/593 (60%), Gaps = 12/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H C  +   D G  V L GWV R R HGG+IF+D+RD  GI QVVA+PD     F+ A
Sbjct: 12  RSHYCAAVTEEDQGKEVVLCGWVERRRDHGGLIFIDLRDRTGIIQVVASPDYEKESFDKA 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+VL + G+V  R   TIN  + TG+IE+  +++ IL+ ++  P  +    +  E
Sbjct: 72  EQVRTEYVLVVRGIVRMRDEATINEKMKTGKIEIRCEELRILNTSKTPPFYIEDNIDVDE 131

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR +YR+LDLRR  +  N++ R ++ ++MR  +    FI+  TP L  S+PEGARD+LV
Sbjct: 132 KIRLQYRYLDLRRPEMQNNLIMRNKVKHAMRDFLNQHGFIDIETPELCKSTPEGARDYLV 191

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN+G FYALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLDMEMS
Sbjct: 192 PSRVNEGKFYALPQSPQIFKQLLMISGMDRYYQIARCFRDEDLRADRQP-EFTQLDMEMS 250

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q+DIL   E ++  VF++ + G  +     R+ +D A+  YG+DKPDLR  +   ++
Sbjct: 251 FMSQEDILQLTEEMIGYVFKQ-ALGYEIPGPIQRMTWDYAMENYGSDKPDLRFDMKFKDI 309

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE    +EF+VF  +  V+ G +V AI  KG  G  R   D + E+  + G  GLA+I +
Sbjct: 310 TELVKDTEFKVFRNV--VDAGGQVKAINVKGYAGIPRRELDGLVEYVSTYGAKGLAWIAF 367

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E G  +    V K L     +AI      + GD    IA  P    +   + R  +A
Sbjct: 368 A--EEGMKS---QVKKFLGEDTLKAIGEACGSETGDLVLMIADKPSVVAAALGELRKEMA 422

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +  GII+ N F F W++DFP +E++EEEK+    H+PFT P+         D   + A  
Sbjct: 423 RRTGIIDENAFAFTWVVDFPMFEYDEEEKRYTAMHHPFTAPRDEDLDKLETDQSKVYAKA 482

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G +R +  ++  + F  +G++ E  + +FG L RAF+ G PPHGG+A 
Sbjct: 483 YDLVLNGVELGGGSLRIYQPDIQQRVFKAIGLTDEEAKQKFGFLLRAFEYGAPPHGGLAF 542

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR++ML+L  K++R+V  FP +QN  D +  +PS V+  QLREL + + ++
Sbjct: 543 GLDRMIMLMLKRKSIRDVIAFPKTQNAIDPMSEAPSEVAPRQLRELHIEVAQD 595


>gi|308070356|ref|YP_003871961.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase) [Paenibacillus
           polymyxa E681]
 gi|305859635|gb|ADM71423.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 592

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 246/594 (41%), Positives = 358/594 (60%), Gaps = 12/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H CG L  + +G  V L+GWV   R  GG++F+D+RD  GI Q+V NP  +    +IA
Sbjct: 3   RSHECGALTHAHIGETVTLNGWVQTRRDLGGVLFIDLRDRSGIVQIVFNPAYSGNALQIA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VRSE+VL + G ++ R AETIN N+ TG+IE+   +IE+L+ ++  P  +    E  E
Sbjct: 63  DRVRSEYVLEVTGTIVKRDAETINPNLPTGEIEVRVTEIEVLNASKTPPFFIENGVEVDE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LDLRR  +++ +  R++     R  +  E F+E  TPILT SSPEGARD+LV
Sbjct: 123 SLRLKYRYLDLRRPEMYQTLKLRSKAAKIFRDFLDGEEFVEVETPILTKSSPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G F+ALPQ+PQ YKQLLM  G +RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVHEGEFFALPQSPQLYKQLLMVGGLERYYQIARCFRDEDLRADRQP-EFTQVDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++QDD+L  ME ++  +F+E + G  +   F RI + +A+ +YG+DKPDLR  + + NV
Sbjct: 242 FMQQDDLLPMMERLMVKLFKE-TVGVELETPFQRITHAEAMDKYGSDKPDLRFGLELINV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            +    S  +VF+ +  +  G EV  + AKG G  +R   D +  +A   G  GLA+I  
Sbjct: 301 NDIVATSGVKVFASV--IEKGGEVKVLNAKGCGTWSRKDIDDLGPYAARYGAKGLAWIQV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +  E       GP+ K       EA++ R   ++GD   F A +           R  I 
Sbjct: 359 KEGEF-----KGPIVKFFTPEEIEALKERTGAEEGDLLLFSADNKKVVADVLGALRLKIG 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG+I+ N F+F W++DFP   ++EE+K+    H+PFT P+     L   D   ++A  
Sbjct: 414 RHLGLIDDNKFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKDEDLGLLDTDPGQVRAQA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  +V  + F  + ++ E V ++FG L  AF+ G PPHGGIA 
Sbjct: 474 YDIVLNGYEVGGGSMRIYKRDVQEKMFKALNLAPEEVTDKFGYLLDAFEYGTPPHGGIAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G DR+VMLL G  N+RE   FP + +  DLLM +P+ V   QL +L +RI   P
Sbjct: 534 GFDRLVMLLAGRTNLRETIAFPKTASATDLLMDAPAEVDQAQLEQLHIRIAPKP 587


>gi|147669288|ref|YP_001214106.1| aspartyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|189082095|sp|A5FRE3|SYD_DEHSB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146270236|gb|ABQ17228.1| aspartyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 598

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/596 (41%), Positives = 361/596 (60%), Gaps = 14/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           +THSC  L   +VG+ V L+GWVHR R HGG+IF+D+RD  GI QVV NP+  +AC +I 
Sbjct: 3   KTHSCA-LTQENVGTEVTLAGWVHRRRDHGGVIFIDLRDREGIVQVVFNPEQSAACLDIG 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +RSE+VL + G+V  R A T N  + +G +E+ A   +IL+ A+  P  +  E E  E
Sbjct: 62  KELRSEYVLQVKGVVSHRPAGTENNRMPSGMVEVVAVHAKILNAAKTPPFYINEEVEVDE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LD+RR  +  N++ R + +  MR  +  + FIE  TPIL  S+PEGARD+LV
Sbjct: 122 SLRLKYRYLDIRRQGMKNNLIIRHKAVRFMREFLNDQGFIEIETPILIKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQQ KQLLM +G ++Y+Q+A CFRDED R+DR P EF QLDMEMS
Sbjct: 182 PSRLFPGKFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQP-EFTQLDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++D++  ME++  G+          +  F RI + DA  +YG DKPDLR  + + ++
Sbjct: 241 FVDEEDMMKLMEDLFTGLVANVRPDMKYNKKFPRISFADATEKYGCDKPDLRFGMELADI 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+    S F VF  + +   G  + AI A G GG N++  + +   A+  G  GL  I  
Sbjct: 301 TDIGASSAFGVFKNVAA--QGGAIKAISAPGCGGYNKSQQEELINLAKKYGAAGLVPISL 358

Query: 362 RLDESGNVAGM------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
            + E+G +  +         AK+L +   + I  R   + GD    +AG      +   +
Sbjct: 359 GV-ENGELKDLTMEMVKSVAAKYLALEEIKTIAERSGAKPGDLILIVAGARKMVNTVLGE 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            RN +A +L + + N   F +++DFP ++W+EE K+ D  H+PFT P      L   D  
Sbjct: 418 MRNQLAVKLNLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLESDMPLMDTDPG 477

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + +  YD+VCNG+EIA G IR H +++  + F  +G + E ++ RFG L  AF+ G PP
Sbjct: 478 RVGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFHLLGYNDEQIDERFGHLLEAFEFGAPP 537

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG+A GIDR VMLL G  ++REV  FP +Q   DLL G+PS V  +Q+R+L +RI
Sbjct: 538 HGGVAPGIDRFVMLLAGETSIREVISFPKNQAAQDLLFGAPSVVDDKQIRDLHIRI 593


>gi|257457749|ref|ZP_05622910.1| aspartyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257444799|gb|EEV19881.1| aspartyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 599

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/596 (41%), Positives = 359/596 (60%), Gaps = 19/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT +CG L  SD G  V L+GWVHR R HGGI F+++RD YG+TQVV + D++    E A
Sbjct: 16  RTVTCGQLQKSDAGKTVVLNGWVHRKRDHGGISFINLRDRYGLTQVVVDDDASPELKETA 75

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             ++ E+ + ++G V  R    +N  + TG IE+ AQ+I +LS +  LP  +  +    E
Sbjct: 76  AGLKMEYCIAVEGTVRLRPDSMVNTEMSTGYIEVKAQRIMVLSKSAVLPFQIDEKTNANE 135

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR  T+  +++ R+++  ++R  +  +NF+E  TP    S+PEGARD+LV
Sbjct: 136 DLRLKYRYLDLRSQTMQDHLILRSKVTFAVREYLTGKNFLEIETPTFIKSTPEGARDYLV 195

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ YKQ+LM SGFDRYFQIA C+RDED R DR P EF Q+D+EMS
Sbjct: 196 PSRLYPGKFYALPQSPQLYKQILMVSGFDRYFQIARCYRDEDARGDRQP-EFTQIDIEMS 254

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV +DD+LN  E++ R VF++ + G  ++ +F RI YDDAI  YGTDKPD+R  + + + 
Sbjct: 255 FVSRDDVLNVTEDMFRTVFKK-TIGADLAQSFPRISYDDAIDLYGTDKPDIRFEMKLQDA 313

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
                 ++F VF   L+     +   +  + G  +R   + +   A+     GLA+    
Sbjct: 314 AWMAECADFAVFKDALAAGGAVKALTVKGQAGSYSRKKIEELEATAKIYKAKGLAWT--- 370

Query: 363 LDESGNVAG---MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARN 418
                 VAG    G +AK+      E  + +L+ QDGD   F+A    K  C+     R+
Sbjct: 371 -----KVAGGAFEGGIAKYCAGAEAEICK-KLNAQDGDLLLFVADAKYKTACTALGAVRS 424

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSI 477
            + ++L +++   F F W++DFP +EWNE+E+K D AH+ F+ PQ   +++L+ N    +
Sbjct: 425 KLGKDLNLLDPKVFAFLWVIDFPLFEWNEDEQKWDPAHHMFSAPQERYLDTLEQNP-GEV 483

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K   YDLV NG+E+ASG IR H  E+  + FS VG +    E +FG L  AF+ G PPHG
Sbjct: 484 KGDLYDLVLNGYEVASGSIRIHNPELQKRIFSIVGFNPADAEKKFGFLTEAFKYGAPPHG 543

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIA G+DRIVML+ G  +++EV  FP +      +  SPS V  +QL EL L I E
Sbjct: 544 GIAPGLDRIVMLMAGETSIKEVIAFPKNTFAVSPMDESPSEVDEKQLAELHLSIRE 599


>gi|229098874|ref|ZP_04229810.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229105037|ref|ZP_04235690.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|229117899|ref|ZP_04247261.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228665556|gb|EEL21036.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228678376|gb|EEL32600.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228684547|gb|EEL38489.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 591

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 361/591 (61%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A ++ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATRVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E+F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEDFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAADCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     + +A+   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDAKALMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|17229928|ref|NP_486476.1| aspartyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|24212410|sp|Q8YUB6|SYD_ANASP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|17131528|dbj|BAB74135.1| aspartate--tRNA ligase [Nostoc sp. PCC 7120]
          Length = 595

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/608 (42%), Positives = 364/608 (59%), Gaps = 31/608 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG+L   D+G  V L GWV R R HGG+IFLD+RD  GI QVV++P      +E+A
Sbjct: 2   RTHYCGELRQKDIGETVTLYGWVDRRRDHGGVIFLDLRDRSGIVQVVSDPQRTPDSYELA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119
            S+R+E+V+ I G V  R  E++N  I TG++E+ A KIE+L+ V ++LP  V       
Sbjct: 62  NSLRNEYVVEITGRVTQRPEESLNTRIPTGEVEIYADKIELLNGVRKQLPFQVSTADTET 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRRD + +NI  R +++ +MR  +   E FIE  TPILT S+PEGAR
Sbjct: 122 VREDLRLKYRYLDLRRDRMARNIQLRHQVVKAMRRYLEDVEGFIEVETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+++PSRVN G ++ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYVLPSRVNPGEWFALPQSPQLFKQILMVSGLDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +++I+   E ++  +F+    G  +   F R+ Y +A+ RYG DKPD R  + 
Sbjct: 241 MEMSFMSEEEIIELNEKLVSYIFKTV-KGVELPLPFPRLTYAEAMERYGCDKPDTRYDLQ 299

Query: 299 MHNVTEHFVHSEFRVFS---------KILSVNPGYE-VWAIPAKGGGGNRAFCDRMNEWA 348
           + NV++    S F+VF          KIL +  G E +  +  K GG      D   E A
Sbjct: 300 LVNVSDVMKDSGFKVFRDAVANGGIVKILPIPNGNEQISNVRIKPGG------DLFRE-A 352

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
              G  GLAYI  R+ E G +  +G +  +L+    + I  R   + G    F AGD + 
Sbjct: 353 SEAGAKGLAYI--RVREDGEIDTIGAIKDNLSEEQKQEILQRTGAKPGHLLLFGAGDAVT 410

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                   R  IA+E G+I+ +     W++DFP +EWN +EK+++  H+PFT P      
Sbjct: 411 VNKTLDRLRQAIAKEFGLIDPDKINLLWVVDFPMFEWNADEKRLEALHHPFTAPHPD--- 467

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              +DL + +A  YDLV NGFE+  G  R +  EV  Q F  +G+S E  +N+FG L  A
Sbjct: 468 -DLHDLKTARAQAYDLVFNGFEVGGGSRRIYQREVQEQVFETIGLSPEEAQNKFGFLLEA 526

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           F+ G PPHGGIA G+DR+VML  G +++R+V  FP +Q    LL  +PS V V+QL+EL 
Sbjct: 527 FEYGTPPHGGIAYGLDRLVMLFAGEESIRDVIAFPKTQQARCLLTDAPSGVDVKQLKELH 586

Query: 589 LRIVENPK 596
           +     PK
Sbjct: 587 VASTYKPK 594


>gi|229032053|ref|ZP_04188035.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228729245|gb|EEL80240.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 591

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/591 (41%), Positives = 359/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E+F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEDFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK        A+   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEEANALMATLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|228993140|ref|ZP_04153062.1| Aspartyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228999190|ref|ZP_04158771.1| Aspartyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228760535|gb|EEM09500.1| Aspartyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228766599|gb|EEM15240.1| Aspartyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 591

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/591 (41%), Positives = 360/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGQGAINENMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  ++R  + +E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMYNTFKMRHDVTKTIRNFLDSEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHEGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL  ME ++  V ++ + G  V   F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILEMMERMMTKVMKD-AKGVEVRAPFPRMKYADAMARYGSDKPDTRFAMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG  G  +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAADCGFKVFTS--AVESGGQVKAINAKGAAGKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   LD   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLDGAAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTDAPSPVAEAQLEELYLQL 585


>gi|75906472|ref|YP_320768.1| aspartyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|97196512|sp|Q3MGL3|SYD_ANAVT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|75700197|gb|ABA19873.1| aspartyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 614

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/608 (42%), Positives = 364/608 (59%), Gaps = 31/608 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG+L   D+G  V L GWV R R HGG+IFLD+RD  GI QVV++P      +E+A
Sbjct: 21  RTHYCGELRQKDIGETVTLYGWVDRRRDHGGVIFLDLRDRSGIVQVVSDPQRTPDSYELA 80

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119
            S+R+E+V+ I G V  R  E++N+ I TG++E+ A KIE+L+ V ++LP  V       
Sbjct: 81  NSLRNEYVVEITGRVTQRPEESLNSRIPTGEVEIYADKIELLNGVRKQLPFQVSTADTET 140

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRRD + +NI  R +++ +MR  +   E FIE  TPILT S+PEGAR
Sbjct: 141 VREDLRLKYRYLDLRRDRMARNIQLRHQVVKAMRRYLEDVEGFIEVETPILTRSTPEGAR 200

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+++PSRVN G ++ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 201 DYVLPSRVNPGEWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 259

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +++I+   E ++  +F+    G  +   F R+ Y +A+ RYG DKPD R  + 
Sbjct: 260 MEMSFMSEEEIIQLNEKLVSYIFKTV-KGVELPLPFPRLTYAEAMERYGCDKPDTRYDLQ 318

Query: 299 MHNVTEHFVHSEFRVFS---------KILSVNPGYE-VWAIPAKGGGGNRAFCDRMNEWA 348
           + NV++    S F+VF          KIL +  G E +  +  K GG      D   E A
Sbjct: 319 LVNVSDVMKDSGFKVFRDAVANGGIVKILPIPNGNEQISNVRIKPGG------DLFRE-A 371

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
              G  GLAYI  R+ E G +  +G +  +L+    + I  R   + G    F AGD   
Sbjct: 372 SEAGAKGLAYI--RVREDGEIDTIGAIKDNLSEEQKQEILQRTGAKPGHLLLFGAGDAAT 429

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                   R  IA+E G+I+ +     W++DFP +EWN +EK+++  H+PFT P      
Sbjct: 430 VNKTLDRLRQAIAKEFGLIDPDKINLLWVVDFPMFEWNADEKRLEALHHPFTAPHPD--- 486

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              +DL + +A  YDLV NGFE+  G  R +  EV  Q F  +G+S E  +N+FG L  A
Sbjct: 487 -DLHDLKTARAQAYDLVFNGFEVGGGSRRIYQREVQEQVFETIGLSPEEAQNKFGFLLEA 545

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           F+ G PPHGGIA G+DR+VML  G +++R+V  FP +Q    LL  +PS V V+QL+EL 
Sbjct: 546 FEYGTPPHGGIAYGLDRLVMLFAGEESIRDVIAFPKTQQARCLLTDAPSGVDVKQLKELH 605

Query: 589 LRIVENPK 596
           +     PK
Sbjct: 606 VASTYKPK 613


>gi|152976820|ref|YP_001376337.1| aspartyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189082085|sp|A7GT84|SYD_BACCN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|152025572|gb|ABS23342.1| aspartyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 589

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  +G  V+L GWV + R  GG+IF+D+RD  GI QVV +P+++    E+A
Sbjct: 4   RTHACGRVTVEAIGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFSPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++R E+VL ++G V++R A  IN N+ TGQIE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRGEYVLHVEGTVVARGAGAINENMATGQIEVQATKVTVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMYNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++IL+ ME ++  V ++   G  +S  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQEEILDMMERMMTKVMKDV-KGVEISVPFPRMTYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTG--AVENGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK  N      I   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFNEEEANVIMTTLEASAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ N F F W+ D+P  E++EE  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDENKFNFLWVTDWPLLEYDEEANRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G ++E    +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFTQEEAREQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTDAPSPVAGAQLEELHLKL 585


>gi|227817181|ref|YP_002817190.1| aspartyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|254781714|sp|C3L608|SYD_BACAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|227007021|gb|ACP16764.1| aspartate--tRNA ligase [Bacillus anthracis str. CDC 684]
          Length = 591

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 359/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVSVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   ++  L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDASVLKNTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|20807683|ref|NP_622854.1| aspartyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|24212404|sp|Q8RAI7|SYD_THETN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|20516231|gb|AAM24458.1| Aspartyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 592

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 244/590 (41%), Positives = 358/590 (60%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG+LGV DVG  V + GWV+  R HGG++F+D+RD  GI Q+V +   +   FE  
Sbjct: 10  RTHMCGELGVKDVGKSVVVMGWVNSRRDHGGLVFIDLRDRTGIVQIVFSEQVSKEVFEKV 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +SVRSE+VL ++G V+ R  E +N  I TG+IE+ A+ ++ILS +E  P P+       E
Sbjct: 70  QSVRSEYVLAVEGEVVKRLPENVNPKIPTGEIEIYAKNLKILSKSETPPFPIEDRSNVSE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR ++ +N++ R ++  ++R  +    FIE  TP+L  S+PEGARD+LV
Sbjct: 130 AVRLKYRYLDLRRPSMQRNLITRFKLTQAVREFLNDNGFIEIETPMLIKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQLLM +GFDRY+QIA C RDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRIYPGKFYALPQSPQIFKQLLMIAGFDRYYQIARCLRDEDLRADRQP-EFTQIDIEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE +D+L+  E +++ VF++  + + +   F R+ Y +A+ R+GTDKPDLR  + + ++
Sbjct: 249 FVEVEDVLDINERMIKHVFKKVLDVD-LDIPFRRLTYQEAMERFGTDKPDLRFGMELKDL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++    SEF VF   L    G  +  I  KG     R   D + E+A++ G  GL    W
Sbjct: 308 SDILRESEFNVFKNAL--KNGGSIRGINVKGAASMTRKQLDELVEFAKNFGAKGL---LW 362

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G V    P  K L       I  RL+ + GD    +A             R  +A
Sbjct: 363 MQVLEGEVK--SPATKFLTEGELNKILERLEAEVGDLLLIVADKDEVVFDTLGHLRVEMA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   +I+ + +EF W++DFP  E++EEEK+    H+PFT P+     L   + L ++A  
Sbjct: 421 KRFNLIDESKYEFVWVVDFPLLEYDEEEKRYVAKHHPFTSPKDEDIDLLEKEPLKVRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H +E+  + F  +G S+E    +FG L  AF+ G PPHGGIA 
Sbjct: 481 YDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEEAWKKFGFLMEAFKYGAPPHGGIAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+ M++ G+  +R+V  FP +QN   L+  +PS VS +QL+EL ++I
Sbjct: 541 GLDRLAMIMTGSDTIRDVIAFPKTQNAVCLMSDAPSEVSEKQLKELHIKI 590


>gi|188996098|ref|YP_001930349.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|229559940|sp|B2V713|SYD_SULSY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|188931165|gb|ACD65795.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 602

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/597 (40%), Positives = 368/597 (61%), Gaps = 19/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R + CGDL  S++G  VRL GWV  VR HGG+IF+++RD  GI QVV +P     E+   
Sbjct: 10  RDYYCGDLNESNIGDEVRLLGWVDTVRDHGGVIFINLRDREGIVQVVFDPSKIGEELYNK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK ++SE+V+ + G V  R A T N  + TG IE++ +++ IL+ ++ LP P+    +  
Sbjct: 70  AKKLKSEYVIGVRGRVYRRPAGTENPKMKTGNIEVAGEELLILNTSKALPFPIEDNIKVS 129

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR ++ +NI+ R  +  ++R  +    FIE  TP+LT S+PEGARDFL
Sbjct: 130 EEVRLKYRYLDLRRPSMQRNIILRHEVYQAVREFLAGNGFIEVETPMLTKSTPEGARDFL 189

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+ +G FYALPQ+PQ +KQ+LM +G +RYFQIA CFRDED R+DR P EF Q+D+EM
Sbjct: 190 VPSRLEKGKFYALPQSPQLFKQILMVAGLERYFQIAKCFRDEDLRADRQP-EFTQIDLEM 248

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV +DD++   E++++ V+++   G  +   F R+ Y++AI +YGTDKPDLR  + + +
Sbjct: 249 SFVTEDDVMTLAESLIQYVYKKVL-GIDIKIPFRRMSYEEAINKYGTDKPDLRYGLELID 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +T+     EF+VF+ +     G  V  I  KGG   +R   D + E+A+  G  G+A++ 
Sbjct: 308 ITDLAKEVEFKVFNDV--AKSGGLVKGINIKGGSKFSRKEIDELTEYAKKFGAKGMAWV- 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +L+   N     P+ K       + +   +D +DGD   FIA             R HI
Sbjct: 365 -KLE---NGEATSPILKFFTEEQKQKLFSLMDAKDGDLLIFIADKKDITHKVLGFLRKHI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-----MESLKGNDL- 474
           A+++ +I+ +  EF W++DFP +EW+EEE ++   H+PFT P+        E+L   ++ 
Sbjct: 421 AEKMNLIDNSKLEFLWVVDFPLFEWDEEENRLVAIHHPFTSPKDEDIDRLDEALNSPEIA 480

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           LS K+  YD+V NG EI  G IR H   +  + F  + IS+E  + +FG L  A   G P
Sbjct: 481 LSFKSKAYDMVLNGEEIGGGSIRIHTPYIQEKVFQLLNISEEEAKEKFGFLIEALSYGAP 540

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PHGG+A G+DRI+ L+ G++++R+V  FP +Q     L G+P  VS +QL+E+G+++
Sbjct: 541 PHGGLAFGLDRILALMTGSESIRDVIAFPKTQKGICPLTGAPDYVSEKQLKEVGIKV 597


>gi|206969547|ref|ZP_03230501.1| aspartyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|229180679|ref|ZP_04308019.1| Aspartyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|206735235|gb|EDZ52403.1| aspartyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228602824|gb|EEK60305.1| Aspartyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 591

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 359/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R A  IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGAGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + + F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKYNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|73748507|ref|YP_307746.1| aspartyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|97196660|sp|Q3ZX84|SYD_DEHSC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|73660223|emb|CAI82830.1| aspartyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 598

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 247/596 (41%), Positives = 362/596 (60%), Gaps = 14/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           +THSC  L   +VG+ V L+GWVHR R HGG+IF+D+RD  GI QV+ NP+  +AC +I 
Sbjct: 3   KTHSCA-LTQENVGTEVTLAGWVHRRRDHGGVIFIDLRDREGIVQVIFNPEQSAACLDIG 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +RSE+VL + G+V  R A T N  + +G +E+ A   +IL+ A+  P  +  E E  E
Sbjct: 62  KELRSEYVLQVKGVVSHRPAGTENNRMPSGMVEVVAVNAKILNAAKTPPFYINEEVEVDE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LD+RR  +  N++ R + +  MR  +  + FIE  TPIL  S+PEGARD+LV
Sbjct: 122 SLRLKYRYLDIRRQGMKNNLIIRHKAVRFMREFLNDQGFIEIETPILIKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQQ KQLLM +G ++Y+Q+A CFRDED R+DR P EF QLDMEMS
Sbjct: 182 PSRLFPGKFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQP-EFTQLDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++D++  ME++  G+          +  F RI + DA+ +YG DKPDLR  + + ++
Sbjct: 241 FVDEEDMMKLMEDLFTGLVANVRPDMKYNKKFPRISFADAMEKYGCDKPDLRFGMELADI 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+    S F VF  + +   G  + AI A G GG N++  + +   A+  G  GL  I  
Sbjct: 301 TDIGASSAFGVFKNVAA--QGGAIKAISAPGCGGYNKSQQEELINLAKKYGAAGLVPISL 358

Query: 362 RLDESGNVAGM------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
            + E+G +  +         AK+L +   + I  R   + GD    +AG      +   +
Sbjct: 359 GV-ENGVLKDLTMEMVKSVAAKYLALEEIKTIAERSGAKPGDLILIVAGARKMVNTVLGE 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            RN +A +L + + N   F +++DFP ++W+EE K+ D  H+PFT P      L   D  
Sbjct: 418 MRNQLAVKLNLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLESDMPLMDTDPG 477

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + +  YD+VCNG+EIA G IR H +++  + F  +G + E ++ RFG L  AF+ G PP
Sbjct: 478 RVGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFHLLGYNDEQIDERFGHLLEAFEFGAPP 537

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG+A GIDR VMLL G  ++REV  FP +Q   DLL G+PS V  +Q+++L +RI
Sbjct: 538 HGGVAPGIDRFVMLLAGETSIREVISFPKNQAAQDLLFGAPSVVDDKQIKDLHIRI 593


>gi|256830602|ref|YP_003159330.1| aspartyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256579778|gb|ACU90914.1| aspartyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 598

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/598 (41%), Positives = 356/598 (59%), Gaps = 22/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+C  LG   +G    L GWV   R HGG+IF+D+RD +G+TQVV +P+ A    A++
Sbjct: 18  RTHTCAGLGTEQLGQEACLMGWVQYRRDHGGLIFIDLRDRHGLTQVVFSPEVAPEAHARA 77

Query: 65  --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+E+VL I G+V +R  + IN  + TG IE+   + ++L+ A+  P P+    +  E
Sbjct: 78  HVLRTEFVLAIKGVVRARPDDMINPKLATGAIEVYVTEFKLLNTAKTPPFPIEDRVDVSE 137

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYRFLDLRR  +  N++ R+R+  S+R  +    F+E  TP+LT S+PEGARDFLV
Sbjct: 138 NLRLKYRFLDLRRKAMADNLILRSRVSQSVRRYLDELGFLEIETPVLTKSTPEGARDFLV 197

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVNQG FYALPQ+PQ +KQLLM  G DRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 198 PSRVNQGQFYALPQSPQLFKQLLMCGGMDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 256

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ ++   E ++  V  E + G  +S    R+ Y+ A+  YG DKPD+R  + + +V
Sbjct: 257 FVDEEQVMEMAEGMMARVLRE-ALGQELSLPIPRMKYEQAMALYGVDKPDIRFGLTLTDV 315

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE    SEF++F+    +       A+P +GGG  +R   D   E+ +  G  GLA+I  
Sbjct: 316 TEIVRGSEFKLFATAALIK------ALPVRGGGELSRKEIDDYTEFVKIYGAQGLAWI-- 367

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++ E G      P+AK L+      +   L +  GD  FF AG P    S   + R  + 
Sbjct: 368 KIKEDG---WQSPIAKFLSDAERAGLTEALGLVPGDIVFFQAGAPEMVNSALGNLRLKLG 424

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKA 479
           +  G+I    F   W+ DFP  EW+ E K+    H+PFT P+  G + +  G  +    A
Sbjct: 425 ERFGLIPEGTFAPLWVTDFPLLEWDPEAKRWVAMHHPFTAPKDMGALATDPGQAV----A 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG E+  G IR H  E     FS +GI++E  + +FG L  A   G PPHGGI
Sbjct: 481 RAYDLVLNGTEVGGGSIRIHNPETQQHMFSALGINEEEAQAKFGFLLDALVFGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR++MLL GAK++R+V  FP +Q    L+  +PS V   QLR+LGLR+ E PK+
Sbjct: 541 AFGLDRLIMLLTGAKSIRDVIAFPKTQKATCLMTEAPSAVENTQLRDLGLRLREKPKE 598


>gi|229111875|ref|ZP_04241421.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|296504895|ref|YP_003666595.1| aspartyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|228671631|gb|EEL26929.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|296325947|gb|ADH08875.1| aspartyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 591

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAADCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAESQLEELNLKL 585


>gi|47566591|ref|ZP_00237413.1| aspartyl-tRNA synthetase [Bacillus cereus G9241]
 gi|218899571|ref|YP_002447982.1| aspartyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228902930|ref|ZP_04067071.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228967478|ref|ZP_04128506.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|229158018|ref|ZP_04286089.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|226735100|sp|B7IIR4|SYD_BACC2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|47556621|gb|EAL14953.1| aspartyl-tRNA synthetase [Bacillus cereus G9241]
 gi|218544670|gb|ACK97064.1| aspartyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228625471|gb|EEK82227.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228792193|gb|EEM39767.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856714|gb|EEN01233.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 591

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMTTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|229048112|ref|ZP_04193683.1| Aspartyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229129683|ref|ZP_04258651.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229146974|ref|ZP_04275336.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228636471|gb|EEK92939.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228653800|gb|EEL09670.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228723215|gb|EEL74589.1| Aspartyl-tRNA synthetase [Bacillus cereus AH676]
          Length = 591

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAADCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|319644799|ref|ZP_07999032.1| aspartyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|317392608|gb|EFV73402.1| aspartyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 592

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 255/593 (43%), Positives = 363/593 (61%), Gaps = 16/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ CG++    +G  V L GWV + R  GG+IF+D+RD  GI QVV NPD +    E A
Sbjct: 4   RTYYCGEITEKAIGETVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKDALETA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           +S+RSE+VL I G V++R   T+N N+ TG+IE+ A+ +++LS A+  P  +  +  E  
Sbjct: 64  ESIRSEYVLDITGKVVAREEATVNPNLKTGRIEIQAESVDVLSAAKTPPFAISDQAAEVS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR K+R+LDLRR  +  ++  R  +  ++R  +    F++  TP+LT S+PEGARD+L
Sbjct: 124 EDIRLKHRYLDLRRPEMFNSLKMRHNVTKAVRRFLDDNGFLDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQIFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI+   E ++  V  E ++G  +S    R+ Y+DA+ RYG+DKPD R  +++ +
Sbjct: 243 SFMSQEDIMKLSEEMMAHVMRE-THGIEISLPLPRMSYEDAMNRYGSDKPDTRFGMLLTD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           V+E    S+F+VF+   +V  G  V AI  KG   N  R   D + E+A + G  GLA  
Sbjct: 302 VSEAVKDSDFKVFAS--AVANGGAVKAINVKGAAANYSRKDIDALGEFAANYGAKGLA-- 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W   E+  +   GP+AK       EA+   LD  DGD   F+A D L+  + A  A R 
Sbjct: 358 -WLKTEADGLK--GPIAKFFAGEKQEALVQALDAADGDLLLFVA-DKLEVVNDALGALRL 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL +I+ + F F W++D+P  E++ EE +   AH+PFTMP      L   +   +K
Sbjct: 414 KLGKELNLIDESLFNFLWVVDWPLLEYDAEEGRYYAAHHPFTMPVREDLKLIETNPQDMK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+  G IR    +V  + F  +G S+E  + +FG L  AF  G PPHGG
Sbjct: 474 AQAYDLVLNGYELGGGSIRIFEKDVQEKMFGLLGFSEEEAKEQFGFLLEAFDYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IA G+DR+VMLL G  N+R+   FP + +   L+  +PS V   QL EL L I
Sbjct: 534 IALGLDRLVMLLSGRTNLRDTIAFPKTASASCLMTEAPSEVDNAQLDELHLEI 586


>gi|205374220|ref|ZP_03227019.1| aspartyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 591

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 237/589 (40%), Positives = 361/589 (61%), Gaps = 9/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H CG++    VG  V L GWV + R  GG+IF+D+RD  GI Q V NP+++    +IA
Sbjct: 4   RSHYCGEVTEVQVGEKVVLKGWVQKRRDLGGLIFIDLRDRSGIVQTVFNPETSMEALQIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  R+E++L + G V+ R  + IN +I TG+IE+S +++ I++ A+  P  +    +  E
Sbjct: 64  EKARNEYILQVSGSVLKRDEKAINPSIPTGKIEISVEEVTIINEAKNPPFMIENNTDVSE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + +    R ++  S+R  +  + F +  TP+LT S+PEGARD+LV
Sbjct: 124 DLRLKYRYLDLRRPEMIETFKMRHQVTTSIRNYLNDQGFYDVETPMLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+DMEMS
Sbjct: 184 PSRVHEGHFYALPQSPQIFKQLLMVSGFDRYYQIVRCFRDEDLRADRQP-EFTQIDMEMS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++I+  ME++++ + +E   G  +   F R+ YD+A+ RYG+DKPD R  + + +V
Sbjct: 243 FMSQEEIVALMEDMMKQLMKEV-KGVDLPAEFPRMTYDEAMSRYGSDKPDTRFAMELIDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            E    S+F+VFS  ++     ++  +       +R   D + E+    G  GLA++  +
Sbjct: 302 AEIVKDSDFKVFSGTIASGGHVKLLNVKGAAERYSRKDIDALTEFVSVYGAKGLAWV--K 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           ++ES      GP+AK L+    + I+     + GD   F+A  P          R  +A+
Sbjct: 360 VEES---EVKGPIAKFLSEEVQQGIKATAGAEVGDLLLFVADKPSVVADSLGALRLKLAK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP         +D  +++A  Y
Sbjct: 417 ELGLIDSSKFNFLWVTDWPLFEYDEEEGRYYAAHHPFTMPAAADVDKLTSDPRNVRAEAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  ++  + F  +G SKE  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYQRDIQEKMFEVLGFSKEEAKEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR+VMLL G  N+R+   FP + +   LL  +P+TVS EQL EL L +
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPNTVSDEQLNELHLSL 585


>gi|324328305|gb|ADY23565.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 591

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMTTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|229163351|ref|ZP_04291303.1| Aspartyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228620132|gb|EEK77006.1| Aspartyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 591

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/597 (40%), Positives = 360/597 (60%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMTTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELSLKLSVKEEK 591


>gi|52081234|ref|YP_080025.1| aspartyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52786614|ref|YP_092443.1| aspartyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|62287542|sp|Q65GR4|SYD_BACLD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|52004445|gb|AAU24387.1| aspartyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52349116|gb|AAU41750.1| AspS [Bacillus licheniformis ATCC 14580]
          Length = 592

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 255/593 (43%), Positives = 363/593 (61%), Gaps = 16/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ CG++    +G  V L GWV + R  GG+IF+D+RD  GI QVV NPD +    E A
Sbjct: 4   RTYYCGEITEKAIGETVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKDALETA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           +S+RSE+VL I G V++R   T+N N+ TG+IE+ A+ +++LS A+  P  +  +  E  
Sbjct: 64  ESIRSEYVLDITGKVVAREEATVNPNLKTGRIEIQAESVDVLSAAKTPPFAISDQAAEVS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR K+R+LDLRR  +  ++  R  +  ++R  +    F++  TP+LT S+PEGARD+L
Sbjct: 124 EDIRLKHRYLDLRRPEMFNSLKMRHNVTKAVRRFLDDNGFLDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQIFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI+   E ++  V  E ++G  +S    R+ Y+DA+ RYG+DKPD R  +++ +
Sbjct: 243 SFMSQEDIMKLSEEMMAHVMRE-THGIEISLPLPRMSYEDAMNRYGSDKPDTRFGMLLTD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           V+E    S+F+VF+   +V  G  V AI  KG   N  R   D + E+A + G  GLA  
Sbjct: 302 VSEAVKDSDFKVFAS--AVANGGAVKAINVKGAAANYSRKDIDALGEFAANYGAKGLA-- 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W   E+  +   GP+AK       EA+   LD  DGD   F+A D L+  + A  A R 
Sbjct: 358 -WLKTEADGLK--GPIAKFFAGEKQEALVQALDAADGDLLLFVA-DKLEVANDALGALRL 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL +I+ + F F W++D+P  E++ EE +   AH+PFTMP      L   +   +K
Sbjct: 414 KLGKELNLIDESLFNFLWVVDWPLLEYDAEEGRYYAAHHPFTMPVREDLKLIETNPQDMK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+  G IR    +V  + F  +G S+E  + +FG L  AF  G PPHGG
Sbjct: 474 AQAYDLVLNGYELGGGSIRIFEKDVQEKMFGLLGFSEEEAKEQFGFLLEAFDYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IA G+DR+VMLL G  N+R+   FP + +   L+  +PS V   QL EL L I
Sbjct: 534 IALGLDRLVMLLSGRTNLRDTIAFPKTASASCLMTEAPSEVDNAQLDELHLEI 586


>gi|228941571|ref|ZP_04104119.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228974500|ref|ZP_04135067.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981094|ref|ZP_04141395.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228778635|gb|EEM26901.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785217|gb|EEM33229.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818078|gb|EEM64155.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942184|gb|AEA18080.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 591

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/591 (41%), Positives = 357/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL I+G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHIEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL  ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILEMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|197119275|ref|YP_002139702.1| aspartyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|238690895|sp|B5EIV1|SYD_GEOBB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|197088635|gb|ACH39906.1| aspartyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 593

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/592 (42%), Positives = 356/592 (60%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+  CG+L    +G  V L GWV + R HGG+IF+D+RD  GI+Q+V +P+  C E    
Sbjct: 10  RSSYCGELRGGHIGQEVTLMGWVSKRRDHGGLIFVDLRDRDGISQIVFDPER-CPEAHAK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S R+E+VL I G V +R   T+N  + TG+IE+   + ++L+ ++ LP  + G  +  
Sbjct: 69  AESARNEYVLAIRGTVAARPEGTVNPKMKTGEIEVLVTECKLLNPSKALPFTLDGFVDVN 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLR  TL +N++ R+++    R  +    FIE  TP LT S+PEGARDFL
Sbjct: 129 ENIRLKYRYLDLRTGTLQQNLMLRSKVAQLTRSYLSDNGFIELETPFLTKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N+G FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 189 VPSRINKGEFYALPQSPQLFKQILMVSGFDRYFQIVRCFRDEDLRADRQP-EFTQIDCEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++++DI+  ME ++  +F E + G  V     R+ Y +AIRR+G D PDLR  + +  
Sbjct: 248 SFIDREDIITVMEGLMARIFTE-ARGVKVELPIERMTYQEAIRRFGVDNPDLRFGLELVE 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +++   +S F+VF+ +  VN G  V  +  KG G  +R   D + E+A+  G  GLAY+ 
Sbjct: 307 LSDIVKNSGFKVFADV--VNGGGIVKGMNVKGAGAMSRKEIDDLTEFAKIYGAKGLAYV- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++   G      P+AK         +    D ++GD   F+A  P          RNH+
Sbjct: 364 -KMTAEG---WQSPIAKFFTPEEIATMDKAFDAKEGDLLLFVADKPKVVNDSLGKLRNHL 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ++G+ + N F F WI DFP  EW+EE K+    H+PFT P         +D    +A 
Sbjct: 420 AAKMGLTDPNVFRFVWITDFPLLEWDEEAKRWAAVHHPFTAPMDEDLQYVESDPGRCRAK 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG EI  G IR H  EV    F  +G+S+E   ++FG L  A + G PPHGGIA
Sbjct: 480 AYDLVLNGNEIGGGSIRIHQEEVQSLMFKMLGLSEENARSKFGFLLDALEYGTPPHGGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR++ML+ G+ ++R+V  FP +Q    L+  +PS V   QLRELG+R+ 
Sbjct: 540 FGLDRLMMLITGSDSIRDVIAFPKTQKGACLMSDAPSGVDALQLRELGIRLA 591


>gi|322382957|ref|ZP_08056789.1| aspartyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153077|gb|EFX45535.1| aspartyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 595

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/597 (41%), Positives = 360/597 (60%), Gaps = 12/597 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           Y+T +CGD+   ++G  V L+GWV R R  GG++F+D+RD  GI Q+V NP       E+
Sbjct: 3   YKTANCGDITKQNIGETVILNGWVQRRRDLGGVLFIDLRDRSGIVQIVFNPAYSGDALEV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A   R+E+VL + G V+ RS ET+N NI  G IE+   +IE+++ A+  P  +    +  
Sbjct: 63  ADRARNEYVLAVKGTVVERSEETVNPNIPNGDIEVHITEIEVMNTAKNPPFFIEDGIDID 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           ES+R KYR+LDLRR  + K ++ R +++   R  +  + FI+  TPILT S+PEGARD+L
Sbjct: 123 ESLRLKYRYLDLRRPEMQKTLMLRAKVVKIFRDYLDEQGFIDIETPILTKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G F+ALPQ+PQQ+KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E 
Sbjct: 183 VPSRVHPGEFFALPQSPQQFKQLLMVSGVERYYQIARCFRDEDLRADRQP-EFTQVDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ QD +L+ ME ++  +  E + G  VS  F R+ Y +A+ +YG+DKPDLR  + + +
Sbjct: 242 SFLSQDQLLDMMEELMVKLVRE-TVGVEVSRPFQRLTYAEAMDKYGSDKPDLRFGMELVD 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++     SE +VFS  L    G EV A+ AKG G  +R   D +  +A   G  GLA+I 
Sbjct: 301 LSGLLADSEAKVFSAALKT--GGEVKALNAKGCGTWSRKEIDDLAPFAMRYGAKGLAWIQ 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +    G +   GP+ K ++     AIR RL  ++GD   F A           + R  I
Sbjct: 359 IK---EGQMK--GPIVKFMSEEEQTAIRERLRAEEGDLLLFSADTKKIVADVLGNLRLKI 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + LG+I+ + F+F W++DFP   ++EE+K+    H+PFT P+     L  +D   I+  
Sbjct: 414 GRRLGLIDDSIFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKDEDLDLFDSDPGQIRGQ 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G  R    +V  + F  +G S+E  +++FG L  AF+ G PPHGGIA
Sbjct: 474 AYDLVLNGYEVGGGSQRIFKRDVQEKMFKALGFSQEEAKDKFGYLLDAFEYGTPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G DR+VMLL G  N+RE   FP + +   LLM +P  V   QL +L ++I+   KK
Sbjct: 534 FGFDRLVMLLAGRSNLRETIAFPKTASATCLLMDAPGEVDAGQLEQLSIKIMGKRKK 590


>gi|315187478|gb|EFU21234.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 597

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/591 (41%), Positives = 352/591 (59%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT +CG L  +D G  V L+GWVHR R HGGI F+++RD YGITQVV + +S      + 
Sbjct: 12  RTTTCGALRATDAGKEVILNGWVHRKRDHGGIHFINLRDRYGITQVVVDEESPEEVRRLV 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++++ E+ + + G+V  R     N  + TG IE+ A  I  LS +E LP P+    +  E
Sbjct: 72  EALKYEYCIAVKGVVRLRPETMRNPQMPTGDIEVLATGIRPLSASEPLPFPIDDAIDARE 131

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLRR  + +N+  R  +    R  ++ + F E  TP    S+PEGARDFLV
Sbjct: 132 ELRLQYRYLDLRRPRMQRNLTLRHLVAWHAREYLVGKGFYEIETPTFIRSTPEGARDFLV 191

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R++ G FYALPQ+PQ +KQLLM +GFD+YFQIA C+RDED R DR P EF Q+DMEMS
Sbjct: 192 PARLHPGRFYALPQSPQLFKQLLMVAGFDKYFQIARCYRDEDARGDRQP-EFTQIDMEMS 250

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV QDD+L   E ++  +F++ + G  +S  F R+ Y++A+ RYGTDKPDLR  + + + 
Sbjct: 251 FVTQDDVLAETEGLMAHIFQK-ALGVDLSLPFPRLTYEEALDRYGTDKPDLRYGLELKDF 309

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T H     F+ F K+  V  G  V A+  +GG   +R   + + E A++    GLA++  
Sbjct: 310 TLHVDKGSFQAFQKV--VAQGGVVKALVVEGGASFSRKEIEALEEVAKTYRAAGLAWM-- 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++ E G   G+G   +        A+   L  + GD    +       C+     R  +A
Sbjct: 366 KVTEGGLEGGVGKFYQE----AAPALITSLGARPGDLILLVGDTWKTACTALGAVRTAVA 421

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +  G+I    F FCW++DFP +EWNEEE+K D AH+ FTMP+     L   D  ++KA  
Sbjct: 422 RTRGLIPEGAFSFCWVVDFPMFEWNEEERKWDPAHHMFTMPREEHLPLLEKDPGAVKAAA 481

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLVCNG+E+ASG +R H  E+  + F  VG S+    +RFG L  AF+ G PPHGGIA 
Sbjct: 482 YDLVCNGYELASGSLRIHDPELQRRIFKVVGFSEAEAASRFGFLTTAFKYGPPPHGGIAP 541

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+VM++ G + +REV  FP +      L GSP+ V   QL EL LR+V
Sbjct: 542 GLDRLVMIMAGEETIREVIAFPKTAAGLSPLDGSPAEVDPAQLEELHLRVV 592


>gi|228987654|ref|ZP_04147768.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228772114|gb|EEM20566.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 591

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMTTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|118580744|ref|YP_901994.1| aspartyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118503454|gb|ABK99936.1| aspartyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 594

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 250/593 (42%), Positives = 356/593 (60%), Gaps = 12/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L    +G  V L GW  R R HGG+IF+D+RD  GI QVV +P+       IA
Sbjct: 9   RTQYCGELTGRHIGQEVILMGWALRRRDHGGLIFIDLRDREGIAQVVFDPEVNGQAHAIA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VRSE+VL I G V+ R A T+N N+ TG++E+   + ++LS ++ LP  +    E  E
Sbjct: 69  ETVRSEFVLAIKGEVIPRPAGTVNPNMKTGEVEIRVSECKLLSRSKALPFMLDEFSEVNE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR K+R+LDLRR  L +N++ R+++    R  +    F+E  TP LT S+PEGARDFLV
Sbjct: 129 NIRLKHRYLDLRRPQLQQNLILRSKVSQLTRSYLTDNGFLEMETPFLTKSTPEGARDFLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+NQGSFYALPQ+PQ +KQ+LM SGFDRYFQ+  CFRDED R+DR P EF Q+D EMS
Sbjct: 189 PSRINQGSFYALPQSPQIFKQILMISGFDRYFQVVRCFRDEDLRADRQP-EFTQIDCEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++DI+  ME ++  VF++ + G  V      I YD+AIRR+G D PDLR  + +  +
Sbjct: 248 FIDREDIIAVMEGLIATVFKQ-AKGVDVQLPIQHITYDEAIRRFGVDNPDLRFGMELCQL 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+    S F+VF+   +   G  V  I AKG    +R   D + E+ R  G  GLAY+  
Sbjct: 307 TDIVKGSGFKVFAD--TAAKGGIVKGINAKGCARFSRKEIDDLTEFVRIYGAKGLAYV-- 362

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              +  N     P+AK        A+      ++GD  FF+A  P          RNH+A
Sbjct: 363 ---KIENNEWRSPIAKFFTPEEIGAMNEAFGAEEGDLLFFVADKPKVVNDSLGKLRNHLA 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             L + + + + F W+ +FP  EW++E+K+    H+PFT P      L  +D    +A  
Sbjct: 420 SLLKLTSNDDYRFVWVTEFPLLEWDDEDKRWAAVHHPFTAPMDEDLPLLESDPGRCRAKA 479

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  +V  + F  +G+S E   ++FG L  A + G PPHGGIA 
Sbjct: 480 YDLVLNGNEIGGGSIRIHQEQVQSRMFELLGMSDESARSKFGFLLDALEFGTPPHGGIAF 539

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR++ML+ G++++R+V  FP +Q    L+  +PS V  +QLRELG+R+ E 
Sbjct: 540 GLDRLIMLMTGSESIRDVIAFPKTQKGACLMSEAPSRVETKQLRELGIRLAEK 592


>gi|218234084|ref|YP_002369212.1| aspartyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228910238|ref|ZP_04074056.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228954687|ref|ZP_04116710.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229152606|ref|ZP_04280795.1| Aspartyl-tRNA synthetase [Bacillus cereus m1550]
 gi|301055911|ref|YP_003794122.1| aspartyl-tRNA synthetase [Bacillus anthracis CI]
 gi|226735101|sp|B7HE37|SYD_BACC4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218162041|gb|ACK62033.1| aspartate--tRNA ligase [Bacillus cereus B4264]
 gi|228630867|gb|EEK87507.1| Aspartyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228805014|gb|EEM51610.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228849402|gb|EEM94238.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|300378080|gb|ADK06984.1| aspartyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 591

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|188585918|ref|YP_001917463.1| aspartyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|229470562|sp|B2A2G0|SYD_NATTJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|179350605|gb|ACB84875.1| aspartyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 585

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/593 (40%), Positives = 362/593 (61%), Gaps = 14/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFE 60
           RTH CG+L    VG  V L GW    R HG +IF+D+RD+ G+ QVV    +NP++   E
Sbjct: 3   RTHYCGELTRELVGKKVVLKGWADNRRDHGKLIFIDMRDNSGLVQVVCDFESNPEA--LE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A SVRSE+VL I G V  RS E +N ++ TG+IE+  + I +L+ ++  P  +    + 
Sbjct: 61  VADSVRSEYVLEITGTVRERSPENVNPDLKTGEIEVDCEDINVLNTSKTPPFFINENVDV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR ++  NI  R +I   +R  +    FIE  TP+LT S+PEGARDF
Sbjct: 121 DENIRLKYRYLDLRRPSMQNNIYLRHKITKLVRDFLDENGFIEVETPMLTKSTPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+++GSFYALPQ+PQ +KQLLMASG ++YFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRLHEGSFYALPQSPQLFKQLLMASGVEKYFQIARCFRDEDLRADRQP-EFSQIDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF EQ++ +  MEN++  +F+E   G  ++  F RI Y +A+ RYG+D PDLR  + +H
Sbjct: 240 MSFFEQEEFMKLMENMVSKLFKEVL-GIELTKPFPRITYQEAMDRYGSDSPDLRYGLELH 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++    +EF+VF + ++     +  A+P +G   +R   D + E+ +  G  GLA++ 
Sbjct: 299 DVSDLVKDAEFKVFRETVASEGQVKGIAVP-QGQEFSRKEIDDLTEFVKEFGAKGLAWMV 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              +E  +     P+AK  +    + I  R+    GD   F+A +P       +  R H+
Sbjct: 358 LEEEEIKS-----PIAKFFSDEELDGIIDRMGANTGDLLLFVADEPEIVADSLSKLREHL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A +L +I  N ++  W++DFP  E++++E +    H+PFT P         N+   I+A 
Sbjct: 413 ANKLDLIPSNEYQLTWVIDFPLMEYDKDEGRYKALHHPFTSPYEDDLEKYENEPEKIRAK 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG EI  G +R H  E+  + F  +GI  E  + +FG L+ AF+ G PPHGGIA
Sbjct: 473 AYDLVLNGVEIGGGSMRIHQKELQEKMFEFLGIPLEEAKQKFGFLFEAFEYGTPPHGGIA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR+VML  G++++R+V  FP + N   L+  +P+ V   QL+EL L+  +
Sbjct: 533 FGLDRLVMLFTGSQSIRDVIAFPKTANASCLMTEAPAKVDENQLKELHLKTTK 585


>gi|307717874|ref|YP_003873406.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306531599|gb|ADN01133.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 622

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 252/592 (42%), Positives = 355/592 (59%), Gaps = 15/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT +CG L  +D G  V L+GWVHR R HGGI F+++RD YGITQVV + +S      + 
Sbjct: 37  RTTTCGALRATDAGKEVILNGWVHRKRDHGGIHFINLRDRYGITQVVVDEESPEEVRRLV 96

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++++ E+ + + G+V  R     N  + TG IE+ A  I  LS +E LP P+    +  E
Sbjct: 97  EALKYEYCIAVKGVVRLRPETMRNPQMPTGDIEVLATGIRPLSASEILPFPIDDAIDARE 156

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLRR  + +N+  R  +    R  ++ + F E  TP    S+PEGARDFLV
Sbjct: 157 ELRLQYRYLDLRRPRMQRNLTLRHLVAWHAREYLVGKGFYEIETPTFIRSTPEGARDFLV 216

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R++ G FYALPQ+PQ +KQLLM +GFD+YFQIA C+RDED R DR P EF Q+DMEMS
Sbjct: 217 PARLHPGRFYALPQSPQLFKQLLMVAGFDKYFQIARCYRDEDARGDRQP-EFTQIDMEMS 275

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV QDD+L   E ++  +F++ + G  +S  F R+ Y++A+ RYGTDKPDLR  + + + 
Sbjct: 276 FVTQDDVLAETEGLMAHIFQK-ALGVDLSLPFPRLTYEEALDRYGTDKPDLRYGLELKDF 334

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T H     F+ F  +  V  G  V A+  +GG   +R   + + E A++    GLA++  
Sbjct: 335 TPHVDKGSFQAFRNV--VAQGGVVKALVVEGGASFSRKEIEALEEVAKTYRAAGLAWM-- 390

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHI 420
           ++ E G   G+G   +        A+   L  + GD    + GD  K  C+     R  +
Sbjct: 391 KVTEGGLEGGVGKFYQG----TAPALITSLGARPGD-LILLVGDAWKTACTALGAVRTAV 445

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G+I    F FCW++DFP +EWNEEE+K D AH+ FTMP+     L   D  ++KA 
Sbjct: 446 ARTRGLIPEGAFSFCWVVDFPMFEWNEEEQKWDPAHHMFTMPREEHLPLLEEDPGAVKAA 505

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLVCNG+E+ASG IR H  E+  + F  VG S+E   +RFG L  AF+ G PPHGGIA
Sbjct: 506 AYDLVCNGYELASGSIRIHDPELQRRIFKVVGFSEEEAASRFGFLTTAFKYGPPPHGGIA 565

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VM++ G + +REV  FP +      L GSP+ V   QL EL LR+V
Sbjct: 566 PGLDRLVMIMAGEETIREVIAFPKTAAGLSPLDGSPAEVDPAQLEELHLRVV 617


>gi|94987429|ref|YP_595362.1| aspartyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731678|emb|CAJ55041.1| Aspartyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 599

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/590 (40%), Positives = 359/590 (60%), Gaps = 16/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H+CG+L + D+G  V L GWV   R HGG+IF+D+RD +GITQVV +PDS+      A
Sbjct: 19  RSHTCGELSIKDIGKHVILMGWVQSRRDHGGLIFVDLRDRFGITQVVFSPDSSLEAHSTA 78

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R E+V+ +DG+V  R    IN N+ TGQIE+     ++L++++  P  +    E  E
Sbjct: 79  HIIRPEYVIAVDGIVRMRPEGMINPNLETGQIEILVSSWKLLNISKTPPFQIEDNIETGE 138

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R ++R+LDLRR  + KNI+ R+  +  +R  + +  F+E  TP LT S+PEGARDFLV
Sbjct: 139 TLRLQWRYLDLRRPVMKKNIILRSNAMQIIRNYLSSHGFLEIETPFLTKSTPEGARDFLV 198

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G  +ALPQ+PQ +KQL M +G DRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 199 PSRLYHGKLFALPQSPQIFKQLCMVAGLDRYFQITRCFRDEDLRADRQP-EFTQIDIEMS 257

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV ++ ++   E++++ +F+E +    +S  F RI + +A+++YG DKPD+R  + +H+V
Sbjct: 258 FVNEEQVMECAEHLMQTLFQE-ALSTEISLPFPRITWFEAMKQYGVDKPDIRFGLELHDV 316

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T     SEF++FS    V       AI   GG   +R   D   E+ ++ G  GLA+I  
Sbjct: 317 TSIVHMSEFKLFSHAKLVK------AIRVPGGASLSRKEIDDFTEFVKNYGAQGLAWI-- 368

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +++E        P+AK L+    E + + L++  GD  FF AG P    +   + R  + 
Sbjct: 369 KINEE---EWQSPIAKFLSEKEKEELSIELNVSKGDILFFQAGSPEVVNAALGNLRVQLG 425

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             LG+I  N + F W+ DFP YE++EEE++    H+PFT P+         +   +KA  
Sbjct: 426 NYLGLIPQNTWSFVWVTDFPLYEYSEEERRYVSCHHPFTAPKESDIHFMKTNPAEVKARA 485

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR H +E+    F ++G S E ++ +FG    A + G PPHGGIA 
Sbjct: 486 YDLVLNGNEVGGGSIRIHQAEIQRHLFEDLGFSLEDIQQQFGFFIEALEYGAPPHGGIAF 545

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VML+  ++++R+V  FP +Q     L G+P  VS +QLRELGL +
Sbjct: 546 GLDRLVMLMSNSESIRDVIAFPKTQKGACPLTGAPDFVSSKQLRELGLTL 595


>gi|313672834|ref|YP_004050945.1| aspartyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939590|gb|ADR18782.1| aspartyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 596

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 250/590 (42%), Positives = 361/590 (61%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG+L   + G  + + GWVHR R HGG+IF+D+RD  G+ Q+V NP+ +     IA
Sbjct: 10  RTHYCGELNGKNTGEDICVMGWVHRRRDHGGVIFIDLRDKTGLLQLVLNPEISPEAHSIA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VRSE+V+ + G V  R   TIN N+ TG+IE+  ++I+IL+ A+  P  +       E
Sbjct: 70  EAVRSEYVVAVKGKVEKRPEGTINENLPTGEIEIIVKEIKILNNAKTPPFQIEENTNVGE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  L KNI+ R  +  +MR  +  + F++  TP LT S+PEGARD+LV
Sbjct: 130 DVRLKYRYLDLRRPNLQKNIILRHNLTRTMREYLYGKGFLDIETPFLTKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQLLM SG+DRYFQI  CFRDED R+DR P EF QLDMEMS
Sbjct: 190 PSRVNPGKFYALPQSPQMFKQLLMISGYDRYFQIVRCFRDEDLRADRQP-EFTQLDMEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++ D+++ +E +   +F++ + G TV   F  + Y +A+ +Y  D PD R  +    +
Sbjct: 249 FIDRQDLMDLIEGLFVEIFQKVA-GITVQRPFPVMTYAEAMEKYSHDAPDTRFELFTKTI 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   ++  G  V AI AKG G  +R   D + ++A S G  GLAYI  
Sbjct: 308 NDLVKDCEFKVFTD--AIKEGGIVKAINAKGAGKFSRKEIDEITDYAVSLGAKGLAYI-- 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +++E G      P+ K L    T  I   +D + GD  FF AG+      F +  R  + 
Sbjct: 364 KINEDGL---QSPIIKFLGEQLTHRILDTMDAKVGDIVFFGAGEKSTVNLFMSKVRLELG 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG+I+ N + F W++DFP  EW++EEK+    H+PFT P      L   D L I+A  
Sbjct: 421 RRLGLIDKNKYNFTWVIDFPLLEWDKEEKRYAAVHHPFTAPVDEDIPLFDTDPLKIRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H S++  + F+ +G++KE  + +FG    A + G PPHGGIA 
Sbjct: 481 YDLVLNGSEIGGGSIRIHRSDIQEKMFNILGLTKEECDLKFGFFIEALRYGTPPHGGIAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DRI  +L GA ++R+V  FP +Q    L+  +P+ V  +QL+EL +++
Sbjct: 541 GVDRIASILAGADSIRDVIAFPKTQKATCLMSDAPNKVDAKQLKELSIKL 590


>gi|30264472|ref|NP_846849.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529930|ref|YP_021279.1| aspartyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187293|ref|YP_030545.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65321769|ref|ZP_00394728.1| COG0173: Aspartyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165871956|ref|ZP_02216597.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|170709264|ref|ZP_02899684.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|228935723|ref|ZP_04098536.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229600038|ref|YP_002868689.1| aspartate--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254724671|ref|ZP_05186454.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254736505|ref|ZP_05194211.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254751358|ref|ZP_05203395.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757690|ref|ZP_05209717.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|46577220|sp|Q81LI7|SYD_BACAN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781713|sp|C3P990|SYD_BACAA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|30259130|gb|AAP28335.1| aspartate--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505078|gb|AAT33754.1| aspartyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181220|gb|AAT56596.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164712246|gb|EDR17782.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|170125840|gb|EDS94747.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|228823961|gb|EEM69780.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229264446|gb|ACQ46083.1| aspartate--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 591

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVSVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDASVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|221194735|ref|ZP_03567792.1| aspartyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185639|gb|EEE18029.1| aspartyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 609

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/594 (40%), Positives = 354/594 (59%), Gaps = 12/594 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACF 59
           H   TH+CG+L   ++G  V L+GWV R R  GG++F+D+RD  G+TQV+ +PD  S  F
Sbjct: 25  HSMHTHTCGELRAENIGEIVTLTGWVWRRRDFGGLVFVDLRDREGLTQVLFDPDVASEAF 84

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A+ +R EW +CI G V  RS    N ++ TG++E+ A +IE+L+ A+  P  +    +
Sbjct: 85  KTAEGIRPEWPVCITGTVQHRSEGQTNESLATGEVEILASEIEVLNTAQTPPFQIENHID 144

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR++DLRR  + +N+  R+    ++R      +F E  TP L  S+PEGARD
Sbjct: 145 VNEDLRLRYRYVDLRRPRMARNLRLRSDFTFALREAFHKRDFTEVETPALFKSTPEGARD 204

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR+  GSFYALPQ+PQ  KQLLM  G +RY+Q+A CFRDED R+DR P EF Q+D 
Sbjct: 205 FLVPSRMQGGSFYALPQSPQLLKQLLMIGGVERYYQVAKCFRDEDLRADRQP-EFTQVDT 263

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV QDD+++ +E++L   F +   G  +     R+ Y DA+  YGTDKPD R  + +
Sbjct: 264 EMSFVTQDDVMSELEDILSDAFGKM--GIQMQTPLRRMQYWDAMDTYGTDKPDTRFGMEL 321

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
           H+V+  F  S F++FS     +  Y V AI A+G G + R+  D++ E A   G  GLA+
Sbjct: 322 HDVSNIFQDSSFKLFSGAAHTDGQY-VKAINARGAGSSPRSQIDKLGEVAAGFGAKGLAW 380

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +R  E G+V   GP+AK  +    +A+R  ++ Q GD   F  G  L+        R 
Sbjct: 381 IAYR--EDGSVG--GPIAKFFSADELDALRAEMEAQPGDLILFAVGARLETDEILGGMRL 436

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           H+A+ L +      +F W+++FP + W+EE +     H PFT P      L   D LSI 
Sbjct: 437 HMARVLEVPR-EGHDFLWVVNFPLFHWDEETQSYASEHMPFTQPNEDQIDLLDADPLSIG 495

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD V +GFE   GG+R H +++ L+    +G +KE  E +FG L  A   G PP GG
Sbjct: 496 SHTYDFVMDGFEAGGGGMRIHNADLQLRILEKLGFTKERAEAQFGFLMEALTYGAPPMGG 555

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            A G+DR+ MLL GA ++R+V  FP + +  DL+  +PS V+ +QL+E+ LR +
Sbjct: 556 FALGLDRVCMLLAGADSIRDVMAFPKTTSGSDLMSAAPSPVTDDQLKEVSLRTL 609


>gi|229081667|ref|ZP_04214162.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228701671|gb|EEL54162.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 591

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/591 (40%), Positives = 359/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK  +  +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFSEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + + F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKYNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|228917036|ref|ZP_04080596.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228929447|ref|ZP_04092468.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229093473|ref|ZP_04224576.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228689944|gb|EEL43748.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228830235|gb|EEM75851.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842643|gb|EEM87731.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 591

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDASVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|229192614|ref|ZP_04319575.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228590921|gb|EEK48779.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 591

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRNLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|49481703|ref|YP_038453.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|118479560|ref|YP_896711.1| aspartyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196034397|ref|ZP_03101806.1| aspartyl-tRNA synthetase [Bacillus cereus W]
 gi|196044917|ref|ZP_03112151.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218905597|ref|YP_002453431.1| aspartyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225866384|ref|YP_002751762.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|228948116|ref|ZP_04110400.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229123943|ref|ZP_04253135.1| Aspartyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229186642|ref|ZP_04313803.1| Aspartyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|62287558|sp|Q6HDC3|SYD_BACHK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225319|sp|A0RJ11|SYD_BACAH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226735099|sp|B7JPY8|SYD_BACC0 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781715|sp|C1ESU7|SYD_BACC3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|49333259|gb|AAT63905.1| aspartate--tRNA ligase (aspartyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|118418785|gb|ABK87204.1| aspartyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|195992939|gb|EDX56898.1| aspartyl-tRNA synthetase [Bacillus cereus W]
 gi|196024405|gb|EDX63078.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218535605|gb|ACK88003.1| aspartyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225786714|gb|ACO26931.1| aspartate--tRNA ligase [Bacillus cereus 03BB102]
 gi|228596901|gb|EEK54560.1| Aspartyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228659245|gb|EEL14893.1| Aspartyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228811474|gb|EEM57811.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 591

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|303326111|ref|ZP_07356554.1| aspartate--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302864027|gb|EFL86958.1| aspartate--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 619

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/596 (41%), Positives = 360/596 (60%), Gaps = 16/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H+CG L ++D  + V L GWV   R HGG+IF+D+RD  G+TQVV +PD A    E A
Sbjct: 24  RSHNCGQLTLADDQAEVCLMGWVQYRRDHGGLIFVDLRDRDGLTQVVFSPDIAPSAHENA 83

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+VL + G V  R    +N+ ++TG+IE+ A + ++L+ +   P P+    +  E
Sbjct: 84  HILRSEYVLAVKGKVRPRPVGMVNSTMVTGEIEVVAYEWKLLNTSRTPPFPIEDRCDAGE 143

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R  +R+LDLRR  +  N+  R ++  ++R  +    F+E  TP+LT S+PEGARDFLV
Sbjct: 144 NLRLAWRYLDLRRPRMQANLRLRHKVAQTIRRYLDEGGFVEVETPVLTKSTPEGARDFLV 203

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQ+LM SG DRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 204 PSRLNPGEFYALPQSPQLFKQMLMVSGLDRYFQIVRCFRDEDLRADRQP-EFTQVDIEMS 262

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ ++   E ++  VF++   G  +S  F R+ +D+A+ RYG DKPD R  + + ++
Sbjct: 263 FVDEEKVMTMAEGLMARVFKDVM-GKELSLPFPRMRWDEAMSRYGVDKPDTRFGLELKDI 321

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T     S F++F++   V       A+   GG    R   D   E+ +  G  GLA+I  
Sbjct: 322 TGIVRGSGFKLFAQAKLVK------AMKVPGGESMTRKEIDAFTEFVKIYGAQGLAWIKI 375

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +  E        P+AK L+    + I   LD+Q GD  FF AG+P    +   + R H+A
Sbjct: 376 KAGE-----WQSPIAKFLSDEERKGIAEALDLQVGDIVFFQAGEPDMVNAALGNLRVHLA 430

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             L +I  + F F W+ DFP YE+++EEK+    H+PFT P  G   L  +D    +A  
Sbjct: 431 GHLKLIPEDSFNFLWVTDFPLYEYDQEEKRYVACHHPFTSPAPGHLELMTSDPAKARARA 490

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  +V  + F  +G + E  E +FG L +A + G PPHGG+A 
Sbjct: 491 YDMVLNGNEVGGGSIRIHSGDVQRKMFEALGFTPEQAETQFGFLIQALEQGAPPHGGLAF 550

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR++MLL GA ++R+V  FP +Q    LL  +P+ V+ +QLRELGLR+ E P K
Sbjct: 551 GLDRLIMLLAGAASIRDVIAFPKTQKATCLLTEAPAPVAGKQLRELGLRLREQPAK 606


>gi|237756201|ref|ZP_04584766.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691630|gb|EEP60673.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 602

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/597 (40%), Positives = 368/597 (61%), Gaps = 19/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R + CGDL  S++G  VRL GWV  VR HGG+IF+++RD  GI QVV +P     E+   
Sbjct: 10  RDYYCGDLNESNIGDEVRLLGWVDTVRDHGGVIFINLRDREGIVQVVFDPSKIGEELYNK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK ++SE+V+ + G V  R A T N  + TG IE++ +++ IL+ ++ LP P+    +  
Sbjct: 70  AKKLKSEYVIGVRGRVNRRPAGTENPKMRTGNIEVAGEELLILNTSKALPFPIEDNIKVS 129

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR ++ +NI+ R  +  ++R  +    FIE  TP+LT S+PEGARDFL
Sbjct: 130 EEVRLKYRYLDLRRPSMQRNIILRHEVYQAVREFLAGNGFIEVETPMLTKSTPEGARDFL 189

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+ +G FYALPQ+PQ +KQ+LM +G +RYFQIA CFRDED R+DR P EF Q+D+EM
Sbjct: 190 VPSRLEKGKFYALPQSPQLFKQVLMVAGLERYFQIAKCFRDEDLRADRQP-EFTQIDLEM 248

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV +DD++   E++++ V+++   G  +   F R+ Y++AI +YGTDKPDLR  + + +
Sbjct: 249 SFVTEDDVMTLSESLIQYVYKKVL-GIDIKIPFRRMSYEEAINKYGTDKPDLRYGLELID 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +T+     EF+VF+ +     G  V  I  KGG   +R   D + E+A+  G  G+A++ 
Sbjct: 308 ITDLAKEVEFKVFNDV--AKSGGLVKGINIKGGSKFSRKEIDELTEYAKKFGAKGMAWV- 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +L+   N     P+ K       + +   +D +DGD   FIA             R HI
Sbjct: 365 -KLE---NGEATSPILKFFTEEQKQKLFSLMDAKDGDLLIFIADKKDITHKVLGFLREHI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-----MESLKGNDL- 474
           A+++ +I+ +  EF W++DFP +EW+EEE ++   H+PFT P+        E+L   ++ 
Sbjct: 421 AEKMNLIDNSKLEFLWVVDFPLFEWDEEENRLVAIHHPFTSPKDEDIDRLDEALNNPEIA 480

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           LS K+  YD+V NG EI  G IR H   +  + F  + IS+E  + +FG L  A   G P
Sbjct: 481 LSFKSKAYDMVLNGEEIGGGSIRIHTPYIQEKVFQLLNISEEEAKEKFGFLIEALSYGAP 540

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PHGG+A G+DRI+ L+ G++++R+V  FP +Q     L G+P  VS +QL+E+G+++
Sbjct: 541 PHGGLAFGLDRILALMTGSESIRDVIAFPKTQKGICPLTGAPDYVSEKQLKEVGIKV 597


>gi|52141106|ref|YP_085724.1| aspartyl-tRNA synthetase [Bacillus cereus E33L]
 gi|62287538|sp|Q634E3|SYD_BACCZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|51974575|gb|AAU16125.1| aspartate--tRNA ligase (aspartyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 591

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEDAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|225848649|ref|YP_002728812.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644107|gb|ACN99157.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 602

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/600 (40%), Positives = 367/600 (61%), Gaps = 19/600 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R + CGDL   ++G  VRL GWV  VR HGG++F+++RD  GI QVV +P     E+   
Sbjct: 10  RDYYCGDLNEGNIGEEVRLLGWVDTVRDHGGVLFINLRDREGIVQVVFDPSKISHEVYNK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK ++SE+V+ + G+V  R   T N+ + TG IE+ A  + IL+ +E LP  +    +  
Sbjct: 70  AKKLKSEYVIGVKGIVSRRPVGTENSKMKTGNIEVLAHYLIILNTSEVLPFQIEDNIKVS 129

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR ++ +NI+ R  +  ++R  ++   FIE  TP+LT S+PEGARDFL
Sbjct: 130 EEVRLKYRYLDLRRPSMQRNIILRHEVYQAVREFLVGNGFIEVETPMLTKSTPEGARDFL 189

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+ +G FYALPQ+PQ +KQ+LM +G +RYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 190 VPSRLEKGKFYALPQSPQLFKQILMVAGLERYFQIVKCFRDEDLRADRQP-EFTQIDLEM 248

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV ++D+++  E +++ V+++   G  +   F R+ Y++AI +YGTDKPDLR  + + +
Sbjct: 249 SFVSEEDVMSLSEALIQHVYKKVL-GIDIKIPFKRMSYEEAINKYGTDKPDLRYGLELID 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +T+  +  EF+VF+ +     G  V  I  KGG   +R   D + E+A+  G  G+A+I 
Sbjct: 308 ITDLALEVEFKVFNDV--AKSGGLVKGINVKGGAKFSRKEIDDLTEYAKKFGAKGMAWI- 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +L+   N     P+ K       + +  ++  QDGD   FIA             R H+
Sbjct: 365 -KLE---NGEATSPILKFFTDDQKQRLFQKMQAQDGDLLVFIADKKEITHRVLGFLRKHL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-----MESLKGNDL- 474
           A++L +I+ N  EF W++DFP +EW+EEE ++   H+PFT P+        ++L+  ++ 
Sbjct: 421 AEKLNLIDKNKLEFLWVVDFPLFEWDEEENRLVAIHHPFTSPKDEDIEKLDQALENPEIA 480

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           LS K+  YD+V NG EI  G IR H   +  + F  + IS+E  + +FG L  A   G P
Sbjct: 481 LSFKSKAYDMVLNGEEIGGGSIRIHTPYLQQKIFKLLNISEEEAKEKFGFLIEALSYGAP 540

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DRI+ L+ G++++R+V  FP +Q     L G+P  V  +QL+ELG++I E 
Sbjct: 541 PHGGLAFGLDRILALMTGSESIRDVIAFPKTQKGVCPLTGAPDYVEEKQLKELGIKIEEE 600


>gi|229086966|ref|ZP_04219123.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696342|gb|EEL49170.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 591

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/597 (40%), Positives = 362/597 (60%), Gaps = 15/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+   K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGPGAINDNMATGRIEVHGAKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  ++R  + +E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMYNTFKMRHDVTKTIRNFLDSEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHEGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL  ME ++  V ++ + G  V   F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILEMMERMMTKVMKD-AKGVEVHAPFPRMKYADAMARYGSDKPDTRFAMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG  G  +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAAGKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEAAPGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++  N KK
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTDAPSPVAEAQLEELYLQL--NVKK 589


>gi|229071911|ref|ZP_04205122.1| Aspartyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228711207|gb|EEL63171.1| Aspartyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 591

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + + F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKYNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|295695735|ref|YP_003588973.1| aspartyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295411337|gb|ADG05829.1| aspartyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 598

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/589 (42%), Positives = 354/589 (60%), Gaps = 12/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG L  SD+G  V LSGWV R R  GG+IFLD+RD  GI QVV++ +   A F +A
Sbjct: 11  RTAMCGRLTESDIGREVVLSGWVQRRRDLGGVIFLDLRDRSGIVQVVSSQEFGEAAFAVA 70

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR+E+V+ + G V++R  ET+N N+ TG IE+ A+++E+L+ ++  P P+    +  E
Sbjct: 71  DLVRNEYVISVRGDVVARDPETVNPNLETGTIEVRAREVELLNRSKPTPFPIEDGIDVDE 130

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R ++R+LDLRR  + +  + R R +  +R  +    F+E  TP+LT  +PEGARD+LV
Sbjct: 131 SVRLRFRYLDLRRPEMQRTFLLRHRAMQQVRRFLDLHGFMEIETPMLTRRTPEGARDYLV 190

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SGF+RYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 191 PSRVHPGQFYALPQSPQLFKQLLMVSGFERYFQIVRCFRDEDLRADRQP-EFTQIDIEMS 249

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+   +    ME ++  +F+E   G TV   F RI YD+A+ RYG+DKPDLR  + + +V
Sbjct: 250 FMPLTEFQELMERMMAELFQELL-GVTVPLPFRRIPYDEAMLRYGSDKPDLRFGLEIRDV 308

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE      FRVF    +VN G  V  + AKG GG +R   D +   A   G  GLA++  
Sbjct: 309 TEMVKTCGFRVFQS--AVNSGGAVRGLNAKGCGGFSRKEIDDLGALAGQLGAKGLAWMV- 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G  +   P+AK        AIR  L  + GD   F+A  P          R H+ 
Sbjct: 366 -ITEEGVKS---PIAKFFTDEELGAIRRELGAEVGDLLLFVADRPEICAEVLGQLRLHLG 421

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG+I+   F F WI DFP + ++EEEK+    H+PFTMP+     L   D   ++A  
Sbjct: 422 RRLGLIDDASFAFAWITDFPLFSYDEEEKRWVAEHHPFTMPRWEDVDLMERDPARVRAQA 481

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+EI  G +R +  ++    F  +G S +    +FG L  AF+ G PPHGG+A 
Sbjct: 482 YDMVLNGYEIGGGSLRIYRRDIQEAMFRTLGFSMDEAREKFGFLLEAFEYGAPPHGGMAF 541

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G DR++ML+ G  ++RE   FP + +   LL G+PS +S EQ REL +R
Sbjct: 542 GFDRVIMLMAGKSSIRECIAFPKTASASCLLTGAPSQISDEQWRELHIR 590


>gi|229198529|ref|ZP_04325233.1| Aspartyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228585032|gb|EEK43146.1| Aspartyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 591

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++IL+ ME ++  V ++ + G  +S  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQEEILDMMERMMTKVMKD-AKGVEISAPFPRMTYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|323490014|ref|ZP_08095235.1| aspartyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396310|gb|EGA89135.1| aspartyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 590

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 248/598 (41%), Positives = 362/598 (60%), Gaps = 16/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG++  S +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+       I 
Sbjct: 3   RTHYCGEVNESVIGQRVTLKGWVQKRRDLGGLIFVDVRDRSGIVQVVFNPEISKEAAAIG 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +S+R+E+V+ IDGLV+ R+A  INA + TG+IE+      +++ A+  P  +    +  E
Sbjct: 63  ESLRNEFVVHIDGLVVERAAGQINATMKTGKIEVQVDHATVINAAKNPPFAIEDNTDVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +++    R+ +  S+R  +  E FIE  TPILT S+PEGARD+LV
Sbjct: 123 DLRLKYRYLDLRRPAMYETFKMRSDVTKSIRRFLDEEGFIEVETPILTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Q+DMEMS
Sbjct: 183 PSRVHDGEFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQIDMEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +DI+   E ++  + ++  N + +   F R+ Y +A+ R+G+DKPD+R  + + +V
Sbjct: 242 FQSMEDIIGMNERLMVQMMKDVKNVD-IEPTFQRMSYTEAMDRFGSDKPDVRFGLELVDV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           ++    S F+VF+   ++  G +V  I  KG   N  R   D + E+A   G  GLA++ 
Sbjct: 301 SDLVKDSAFKVFTG--AIENGGQVKLINVKGQAANYSRKDIDALGEFAAVYGAKGLAWL- 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK        A+  R   + GD   F+A             R   
Sbjct: 358 -KVEEEGV---KGPIAKFFEGEAATALTERAQAEAGDLLLFVADKKSVVADALGALRLKF 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479
            +ELG+I+ + ++F WI D+P  E++E++ +   AH+PFTMP +  ++ L   D  S++A
Sbjct: 414 GKELGLIDSSVYKFLWITDWPLLEYDEKDGRYYAAHHPFTMPFEEDLDKL-ATDPQSVRA 472

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+E+  G  R +  E+  Q F  +G SKE    +FG L  AF+ G PPHGGI
Sbjct: 473 QAYDLVLNGYELGGGSARIYRREIQEQMFEVLGFSKEEANEQFGFLMEAFEYGTPPHGGI 532

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPK 596
           A G+DR+VMLL G  N+R+   FP + +  DLL  +PSTVS  QL EL L + ++N K
Sbjct: 533 AFGLDRLVMLLAGRTNLRDTIAFPKTASASDLLTDAPSTVSGAQLDELSLSLNIQNNK 590


>gi|308272199|emb|CBX28805.1| Aspartyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 604

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/590 (42%), Positives = 352/590 (59%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+C +LG  D G  V L GWV R R HGG+IF+D+RD  G+TQVV NPD  S     A
Sbjct: 19  RTHNCCELGSKDTGKEVVLMGWVQRRRDHGGVIFIDLRDREGLTQVVFNPDYESKTHSKA 78

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+V+ I G V  R    IN N+ TG+IE+   +++IL+ A   P  +    +  E
Sbjct: 79  HEIRSEYVIGIRGKVEKRPEGMINPNLKTGEIEVFVSELKILNEACTPPFLIEDSVDVSE 138

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R K R +DLRR  + KN++ R +   S+R  +    FI+  TP+LT S+PEGARD+LV
Sbjct: 139 NVRLKNRHIDLRRPNIQKNLILRHKSAASVRKYLNGLGFIDIETPVLTKSTPEGARDYLV 198

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 199 PSRINPGMFYALPQSPQIFKQLLMISGFDRYYQIVRCFRDEDLRADRQP-EFTQIDIEMS 257

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV +DD+++  E +++ +F++  + + +   FL+I Y +AI RYG DKPDLR  + + +V
Sbjct: 258 FVGEDDVMDLAEGLIKNLFKDVLDKD-IQTPFLKIPYSEAIDRYGLDKPDLRFGLELKDV 316

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++    S F+VFS +  V  G  V A+ AKG  G +R   D    +A      GLA+I  
Sbjct: 317 SDIVKTSGFKVFSTV--VEKGGIVKALNAKGCVGFSRKEIDDFTAFAAVYKAKGLAWI-- 372

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++ E G      P+AK       +A+  R+ ++ GD  FF+A  P          RNHIA
Sbjct: 373 KVKEDG---WQSPIAKFFTENEKQALAERIGIETGDLIFFVADQPKITNDALGHLRNHIA 429

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           Q+L +I+ N F F W+  FP  E++E EK+    H+PFT P      L     L++++  
Sbjct: 430 QKLNLIDDNVFNFLWVTQFPMIEYDETEKRYQAMHHPFTSPLEEDFELLKETPLAVRSRA 489

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  ++    F  +G++ E    +FG L  A   G PPHGGIA 
Sbjct: 490 YDLVLNGSEIGGGSIRIHQKKLQETVFETLGMTPESYNEKFGFLLSALDSGAPPHGGIAF 549

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR++M+L G  ++R+V  FP +Q    LL  +PS  S  QL EL LR+
Sbjct: 550 GFDRLIMILCGGSSIRDVIAFPKTQKASCLLTNAPSETSKAQLDELCLRV 599


>gi|42783531|ref|NP_980778.1| aspartyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|62287576|sp|Q730D1|SYD_BACC1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|42739460|gb|AAS43386.1| aspartyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 591

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 239/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++IL+ ME ++  V ++ + G  +S  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQEEILDMMERMMTKVMKD-AKGVEISAPFPRMTYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMTTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + + F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKYNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|119511813|ref|ZP_01630914.1| aspartyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119463525|gb|EAW44461.1| aspartyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 595

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/608 (41%), Positives = 367/608 (60%), Gaps = 31/608 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH C +L   D+G  V L GWV R R HGG+IFLD+RD  GI QVV++P      +++A
Sbjct: 2   RTHYCSELRKKDIGETVTLYGWVDRPRDHGGVIFLDLRDRSGIVQVVSDPQRTPDSYDLA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYP 121
            ++R+E+V+ I G V  R  E++N  + TG++E+ A KI +L+ V+++LP  V   R Y 
Sbjct: 62  NTLRNEYVVEITGTVTQRPEESLNLRLPTGEVEIYADKITLLNGVSKQLPFQV--SRAYS 119

Query: 122 ESIR----FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA--ENFIECSTPILTASSPE 175
           ES+R     KYR+LDLRR+ + +N+  R +++ +MR R +   E FIE  TPILT S+PE
Sbjct: 120 ESVREDLRLKYRYLDLRRERMAQNMQLRHQVVKAMR-RFLEDLEGFIEIETPILTRSTPE 178

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARD+++PSR N G ++ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF 
Sbjct: 179 GARDYILPSRSNPGEWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQP-EFT 237

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           QLDMEMSF+ Q++IL   E ++  +F+    G  ++  F R+ Y DA+ RYG+DKPD R 
Sbjct: 238 QLDMEMSFMSQEEILALNEKLVAHIFKTV-KGIELNLPFPRLTYADAMSRYGSDKPDTRY 296

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWA 348
            + + NV++    S F+VF   ++     ++  IP     GN A  +        + + A
Sbjct: 297 GLELVNVSDVLKDSGFKVFRDAIAHGGIVKILPIPL----GNDAISNVRIKPGGDLFKEA 352

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
              G  GLA+I  R+ E+G +  +G +  +L+    + I  R D + G    F AGD   
Sbjct: 353 SEAGAKGLAFI--RVRENGEIDTIGAIKDNLSAEQKQEILQRTDAKPGHLLLFGAGDTAT 410

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                   R  +A+E  +IN       WI DFP +EWN +EK+++  H+PFT P     S
Sbjct: 411 VNKTLDRLRQVVAREFKLINPEKINLLWITDFPMFEWNADEKRLEALHHPFTAPHPEDVS 470

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
               DL + +A  YDLV NG EI  G +R + S++  Q F  +G+S E  +N+FG L  A
Sbjct: 471 ----DLKTARAQAYDLVLNGLEIGGGSLRIYQSDIQQQVFEAIGLSPEEAQNKFGFLLDA 526

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           F+ G PPHGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +PS V V+QL++L 
Sbjct: 527 FEYGTPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQARCLLTDAPSGVDVKQLKDLH 586

Query: 589 LRIVENPK 596
           +     PK
Sbjct: 587 VASTYKPK 594


>gi|206976035|ref|ZP_03236945.1| aspartyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217961892|ref|YP_002340462.1| aspartyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222097846|ref|YP_002531903.1| aspartyl-tRNA synthetase [Bacillus cereus Q1]
 gi|229141140|ref|ZP_04269681.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|226736377|sp|B7HQG0|SYD_BACC7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781716|sp|B9IYX5|SYD_BACCQ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|206745787|gb|EDZ57184.1| aspartyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217067278|gb|ACJ81528.1| aspartyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221241904|gb|ACM14614.1| aspartyl-tRNA synthetase [Bacillus cereus Q1]
 gi|228642303|gb|EEK98593.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 591

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++IL+ ME ++  V ++ + G  +S  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQEEILDMMERMMTKVMKD-AKGVEISAPFPRMTYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|148656111|ref|YP_001276316.1| aspartyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|229470565|sp|A5UUR3|SYD_ROSS1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148568221|gb|ABQ90366.1| aspartyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 589

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/591 (42%), Positives = 344/591 (58%), Gaps = 17/591 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR+H+CG+L    +G  V L+GWVHR R HG +IF+D+RD YGITQ+V   DSA   +A 
Sbjct: 2   YRSHTCGELRAEHIGQEVLLAGWVHRRRDHGPLIFIDLRDRYGITQIVF--DSADSPVAH 59

Query: 64  SV----RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +V    R E+VL + G V+ R  E  N +I TG IE+ A +  +L+ A+  PL +  E  
Sbjct: 60  AVASDARVEYVLQVRGRVVQRPEEAYNPDIATGMIEVHATEATVLNPAKTPPLYINKEGG 119

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E++R KYR+LDLRR+ + +NI+ R RI+  +R  +  E F+E  TPIL  S+PEGARD
Sbjct: 120 EEETLRLKYRYLDLRRERMQRNIMLRHRIVKFIRDFLDREGFVEIETPILIKSTPEGARD 179

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR++ G FYALPQ+PQQ KQLLM +GFDRYFQIA CFRDED R+DR P EF QLDM
Sbjct: 180 YLVPSRLHPGKFYALPQSPQQLKQLLMVAGFDRYFQIARCFRDEDQRADRQP-EFTQLDM 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV+Q D+L+ +E +   +  E      +   F R+ Y +A+ R+G+DKPDLR  + +
Sbjct: 239 EMSFVDQGDVLDIIERLFTALCREIVPHKRLVTPFPRLTYAEAMERFGSDKPDLRYGLEL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V++    S F VF   L      +   IP   G  +R   D + E A+  G  GL   
Sbjct: 299 VDVSDVVAASSFGVFRAALDTGGQVKGLRIPG-AGSYSRKQIDEVVELAKQAGARGL--- 354

Query: 360 FWRL--DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
            W +   E G V       + ++     AI  R++   GD    I  DP K  +   D  
Sbjct: 355 LWAVVPGEGGEV--RSSFGRQVSPDEMAAIIRRMEGAPGD-LLLIVADPPKIVAQTLDRL 411

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R      L + + N   + W++DFP  EWNEEE++ D  H+PFT P+     L   D   
Sbjct: 412 RREFGARLNLADPNVLAWAWVIDFPLVEWNEEEQRWDAVHHPFTAPKDEDLHLMDTDPGR 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YDL+ NG+E   G IR H  +V  + F  +GI +E    +FG +  AF+ G PPH
Sbjct: 472 VRAKAYDLILNGYEAGGGSIRIHRRDVQQRLFDLLGIDRETAMRQFGHMLEAFEYGAPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           GGIA GIDRI M+L     +REV  FP +Q   DL+  +PS V   QLREL
Sbjct: 532 GGIAPGIDRICMILADEVTIREVMAFPKTQQAVDLMTNAPSPVDERQLREL 582


>gi|224476727|ref|YP_002634333.1| aspartyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254781751|sp|B9DNF8|SYD_STACT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|222421334|emb|CAL28148.1| aspartyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 588

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/594 (41%), Positives = 356/594 (59%), Gaps = 18/594 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +G  V L GWVH  R  GG+IF+D+RD  G  Q+V NPD      EIA
Sbjct: 4   RTTYCGLVTEDLLGQRVTLKGWVHNRRDLGGLIFVDLRDREGYVQIVFNPDFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP 121
           +S+RSE+V+ ++G V  R  ET+N  I TG +E+    I I++ A+  P  +  E ++  
Sbjct: 64  ESIRSEYVIEVEGTVTKRDPETVNPKIKTGNVEVQVDHINIINKAQTPPFSINDENQQVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L + I  R +I  S+R  +  + F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTIKMRHQITRSVREFLDRDGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGQFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDVEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +L+ V ++   G  ++  F R+ Y +A+ RYG+DKPD R  + + +
Sbjct: 243 SFVDQEDVMEMGEALLKKVVKDV-KGIDLTEQFPRMTYAEAMSRYGSDKPDTRFEMELKD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V+E     +F+VF    +V  G EV A+ AKG      R   D + E+    G  GLA++
Sbjct: 302 VSELGRTMDFKVFKD--TVEKGGEVKALAAKGAADKYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+A+     + E ++     + GD   F+A  P          R  
Sbjct: 360 --KVVEDGF---SGPIARFFEDKDVEKVKELTGAETGDLVMFVADKPSVVAQSLGALRVK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK- 478
           +A ELG+I+ N   F W+ D+P  E++E+EK+   AH+PFT P+   E L   D    K 
Sbjct: 415 LAHELGLIDNNKLNFLWVTDWPLLEYDEDEKRYVAAHHPFTSPKD--EDLDKLDSAPEKA 472

Query: 479 -AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+E+  G IR H +++  + F  +G +KE  + +FG L  AF+ G PPHG
Sbjct: 473 QAKAYDIVLNGYELGGGSIRIHNADIQSKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DR VMLL G  N+R+   FP + +   L+  +PS VS +QL EL LRI
Sbjct: 533 GIALGLDRFVMLLAGRNNLRDTIAFPKTASAVSLMTQAPSEVSDKQLEELSLRI 586


>gi|228960676|ref|ZP_04122320.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228798982|gb|EEM45955.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 591

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/591 (40%), Positives = 357/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAADCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++  G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEGDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDANRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAESQLEELNLKL 585


>gi|167629918|ref|YP_001680417.1| aspartyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|226736542|sp|B0TF89|SYD_HELMI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167592658|gb|ABZ84406.1| aspartyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 605

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/598 (40%), Positives = 364/598 (60%), Gaps = 15/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H  GDL +   G  V L GWV R R HGG+IF+D+RD  G+ QVV +P+     F  A
Sbjct: 11  RSHRGGDLRIDHAGQTVTLMGWVQRRRDHGGLIFVDLRDRSGLVQVVFSPEVGKEAFTKA 70

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+VL + G V  R   T+NAN+ +GQI++ A+++ +L+ A+  P  +    +  E
Sbjct: 71  EDVRNEYVLAVTGDVRPRPEGTVNANLPSGQIDVYARQLWVLNSAKTPPFYIEDGVDVDE 130

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + +N++ R +   +MR  +    F+E  TP+LT S+PEGAR+F+V
Sbjct: 131 TVRLKYRYLDLRRPEMQRNLIIRHKTAKAMRDFLDRNGFLEIETPMLTKSTPEGAREFMV 190

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G F+ LPQ+PQ YKQ+LM +G +RYFQI  CFRDED R+DR P EF QLD+EMS
Sbjct: 191 PSRIHPGEFFVLPQSPQLYKQILMVAGMERYFQIVRCFRDEDLRADRQP-EFTQLDIEMS 249

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F + DD+L  ME ++  +F+E + G  +S  F RI Y +A+ R+G+DKPDLR  + + ++
Sbjct: 250 FTQMDDLLTLMEEMVAHIFKE-ALGKEISTPFRRIPYAEAMGRFGSDKPDLRFGLELIDL 308

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE     EF+VF+ +  V  G EV AI AKG    +R   D + +     G  GLAYI  
Sbjct: 309 TETVKDVEFKVFASV--VKGGGEVKAINAKGCAHFSRKEIDDLTKGVAVYGAKGLAYI-- 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++ E G  +   P+AK        A+  RL  + GD   F+A  P    +     R  +A
Sbjct: 365 QMTEEGPKS---PIAKFFTDEQLNAVLDRLGAEKGDLLLFVADKPSVVAASLGFLRQELA 421

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L +I+    EF W++DFP  E++ EEK+ +  H+PFT P+     L   +   ++A  
Sbjct: 422 RRLNLIDSEKLEFAWVVDFPLVEYDPEEKRYNAIHHPFTAPKDEDLDLLDKEPGKVRAKA 481

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G +R +  ++  + F+ +G++ E    +FG L  AF  G PPHGGIA 
Sbjct: 482 YDLVLNGVELGGGSLRIYRRDIQEKMFAILGLTAEEAYQKFGFLLDAFDYGTPPHGGIAF 541

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI---VENPK 596
           G+DR++ML+ G   +R+V  FP +Q+  D+++ +PS V+  QL+EL +++   V+ PK
Sbjct: 542 GLDRMIMLMTGRDTIRDVIAFPKTQSASDMMVDAPSAVTPRQLKELHIKLDLPVKAPK 599


>gi|320354862|ref|YP_004196201.1| aspartyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320123364|gb|ADW18910.1| aspartyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 594

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 239/589 (40%), Positives = 357/589 (60%), Gaps = 12/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+C +LG+  +     L GWV R R HGG+IF+D+RD +GITQVV NP+   A    A
Sbjct: 9   RTHTCNELGLDFLDQETTLMGWVLRRRDHGGVIFIDLRDRWGITQVVFNPEINPAVHAKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSEWV+ + G V  R     N  + TG IE+   ++ IL+ +E  P P+  + E  +
Sbjct: 69  HQLRSEWVIAVRGRVAKRPESMENPKLATGAIEILVDELRILNTSETPPFPLDEDVEVSD 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YR+LDLRR  + KN++ R + + ++R  +    F+E  TP+LT S+PEGARD+LV
Sbjct: 129 TLRLQYRYLDLRRPEIAKNLILRHQALQTVRTYLNDNQFLEIETPMLTRSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G F+ALPQ+PQ +KQ+LM +G DRY+QI  CFRDED R+DR P EF Q+DME+S
Sbjct: 189 PSRVHAGKFFALPQSPQLFKQILMVAGMDRYYQIVKCFRDEDLRADRQP-EFTQIDMELS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I+  +E +++ +F+E  + + +   F R+ YD+A+RR+GTD+PD R  + + ++
Sbjct: 248 FITEEEIITIVEGMIKALFKEIRDLD-LQPPFNRMTYDEAMRRFGTDRPDTRFGLELVDL 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE      F+VF+ +  ++ G  V AI AKG G  +R   D + E+A   G  G+A+I  
Sbjct: 307 TETLRGCGFKVFNTV--IDKGGMVKAINAKGCGAFSRKDLDDLTEYAGRFGARGMAWIKV 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE        P+ K       +A+   LD Q GD   F A          ++ R  +A
Sbjct: 365 KEDE-----WQSPITKFFTEDEIKAMAQALDAQPGDLILFGADTAKTVHQVLSELRLELA 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG+I  + F F W+ DFP  E++EE+K+    H+PFT P      L   D  ++K+  
Sbjct: 420 RRLGLIQGDSFNFLWVTDFPLLEYDEEQKRYTAVHHPFTAPNEAQLELLETDPGAVKSRA 479

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H   +  + F  +GI  E  + +FG L RA + G PPHGGIA 
Sbjct: 480 YDLVLNGNEIGGGSIRIHSPLMQKKVFKALGIETEEAQEKFGFLLRALELGAPPHGGIAF 539

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR++MLL G+ ++R+V  FP +Q     L  +PS+V+ +QL EL L+
Sbjct: 540 GVDRLMMLLTGSTSIRDVIAFPKTQKATCPLTEAPSSVARKQLTELHLQ 588


>gi|238018959|ref|ZP_04599385.1| hypothetical protein VEIDISOL_00819 [Veillonella dispar ATCC 17748]
 gi|237864443|gb|EEP65733.1| hypothetical protein VEIDISOL_00819 [Veillonella dispar ATCC 17748]
          Length = 605

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/589 (39%), Positives = 361/589 (61%), Gaps = 9/589 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
           +RTH CG +   +VG  V L GWV R R HGG+IFLD+RD  G+ QVVA+PD     F  
Sbjct: 12  HRTHGCGTISEQEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGVVQVVASPDHNVESFHK 71

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VLC+ G +  R    IN N+ TG  E+  +++ +L+ A+  P  +  + +  
Sbjct: 72  AEDVRNEYVLCVRGKITKRDEAAINPNLPTGAYEMFCEELRVLNSAKTPPFYIQDDIDVD 131

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + +N++ R ++  +MR    + +F+E  TP+LT S+PEGARD+L
Sbjct: 132 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 191

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 192 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDLEM 250

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++DI + +E ++  VF+  + G  +  +  RI +D+A+ +YG+DKPDLR  +   +
Sbjct: 251 SFVDEEDIYSMLEEMIAHVFKT-TLGKEIPLSMPRITWDEAMDKYGSDKPDLRFDMAFTD 309

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VT+    +EF+VF  ++      +   +P   G   R   D + E+    G  GLA+  +
Sbjct: 310 VTDLVKDTEFKVFRSVIDNGGVVKGIVVPGDAGIPRREL-DDLVEYVNRYGAKGLAWACF 368

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             +E G++     + K L       I  ++  + GD    IA  P        + R  +A
Sbjct: 369 --NEDGSIKSQ--IMKFLGEDTIRNIGEKMGAKGGDLVLMIADKPATVARALGELRLEMA 424

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + + +I+ +   F W+ DFP +E+NE+EK+    H+PFTMP+        +D  S+KA  
Sbjct: 425 RRMNMIDQDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHEDLDKLESDPGSVKAIA 484

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R + S+V  + F  +G+S+E  +++FG +  AFQ G PPH G A 
Sbjct: 485 YDMVLNGVEIGGGSLRIYQSDVQEKVFKAIGLSEEEAKSKFGFMLDAFQYGAPPHAGCAF 544

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QL+EL ++
Sbjct: 545 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIK 593


>gi|167636507|ref|ZP_02394804.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|254684158|ref|ZP_05148018.1| aspartyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254741543|ref|ZP_05199230.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|167528100|gb|EDR90897.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0442]
          Length = 591

 Score =  456 bits (1172), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 357/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVSVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDASVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+      AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADCYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|290968831|ref|ZP_06560368.1| aspartate--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781127|gb|EFD93718.1| aspartate--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 597

 Score =  455 bits (1171), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/595 (41%), Positives = 361/595 (60%), Gaps = 13/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           +RT  C ++G +D G  V L GWV R R HGG+IF+D+RD  GI QVVA PD  +A F+ 
Sbjct: 8   HRTQYCAEVGEADQGKEVVLCGWVERRRDHGGLIFIDLRDRTGIVQVVAAPDYETASFQK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VL + G V  R AET+N  + TG IE+   ++ IL+ ++  P  +    +  
Sbjct: 68  AEQVRTEYVLVVRGTVRMRDAETVNPKMKTGTIEVRCNELRILNSSKTPPFYIEDNIDVD 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR KYR+LDLRR  +  N++ R  + ++MR  +    FI+  TP L  S+PEGARD+L
Sbjct: 128 EKIRLKYRYLDLRRPEMQHNLIMRHHVKHAMRSFLNTHGFIDIETPELCKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLDMEM
Sbjct: 188 VPSRVNEGKFYALPQSPQIFKQLLMISGMDRYYQIARCFRDEDLRADRQP-EFTQLDMEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++Q+DIL+  E +++ +F+E + G  +     R+ +D A+  YG+DKPDLR  +   +
Sbjct: 247 SFMDQEDILSLTEEMMQYIFKE-TLGYELPLPIQRMTWDYAMENYGSDKPDLRFDMKFTD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           VTE    ++F+VF  +  ++ G  V AI  KG     R   D + E+    G  GLA+I 
Sbjct: 306 VTELVKDTDFKVFRSV--IDNGGRVKAINVKGDADIPRRELDGLVEYVSHYGAKGLAWIG 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +  D  GN+     + K         I      + GD    IA  P    +   + R  +
Sbjct: 364 FTAD--GNLKSQ--IKKFFGEEKLREIGAACGAETGDLILMIADKPAVVAAALGELRKEM 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLSIKA 479
           A+ + +I+ N F F W++DFP +E++EEEK+    H+PFT M +  ++ L+  D   + A
Sbjct: 420 ARRMHLIDENQFAFTWVVDFPMFEYSEEEKRYVAMHHPFTAMREEDLDKLE-TDPGHVYA 478

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG E+  G +R +  ++  + F  +G++ E  E +FG L RAF+ G PPHGG+
Sbjct: 479 KAYDLVLNGIELGGGSLRIYQPDIQQRVFKAIGLTPEEAEQKFGFLMRAFEYGAPPHGGL 538

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR++ML+L  K++R+V  FP +QN  D +  +PS V+ +QL EL ++  E 
Sbjct: 539 AFGLDRMIMLMLKRKSIRDVIAFPKTQNAIDPMSEAPSVVTRKQLHELHIQTEEE 593


>gi|190566955|ref|ZP_03019871.1| aspartyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|190561946|gb|EDV15915.1| aspartyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
          Length = 592

 Score =  455 bits (1171), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/592 (40%), Positives = 359/592 (60%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVSVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDASVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAK-NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G + N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 586


>gi|30022478|ref|NP_834109.1| aspartyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|46577218|sp|Q817X8|SYD_BACCR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|29898036|gb|AAP11310.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 14579]
          Length = 591

 Score =  455 bits (1171), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/591 (40%), Positives = 357/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD    + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTCFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAADCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKL 585


>gi|313893155|ref|ZP_07826732.1| aspartate--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442508|gb|EFR60923.1| aspartate--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 601

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 232/589 (39%), Positives = 360/589 (61%), Gaps = 9/589 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
           +RTH CG +   +VG  V L GWV R R HGG+IFLD+RD  G+ Q+VA+PD     F  
Sbjct: 8   HRTHGCGTISEQEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGVVQIVASPDHNVESFHK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VLC+ G +  R    IN N+ TG  E+  +++ +L+ A+  P  +  + +  
Sbjct: 68  AEDVRNEYVLCVRGTITKRDDSAINPNLPTGAYEMFCEELRVLNSAKTPPFYIQDDIDVD 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + +N++ R ++  +MR    + +F+E  TP+LT S+PEGARD+L
Sbjct: 128 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQIA CFRDED R+DR P EF QLD+EM
Sbjct: 188 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIARCFRDEDLRADRQP-EFTQLDLEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++DI + +E ++  VF+  + G  ++    RI +D+A+ +YG+DKPDLR  +   +
Sbjct: 247 SFVDEEDIYSMLEEMVAHVFKT-ALGKEITLPMPRITWDEAMDKYGSDKPDLRFDMAFTD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VT+    +EF+VF  ++      +   +P   G   R   D + E+    G  GLA+  +
Sbjct: 306 VTDLVKDTEFKVFRSVIDNGGVVKGIVVPGDAGIPRREL-DDLVEYVNRYGAKGLAWACF 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             +E G++     + K L       I  ++  + GD    IA  P        + R  +A
Sbjct: 365 --NEDGSIKSQ--IMKFLGEDTIRNIGKKMGAKGGDLVLMIADKPATVARALGELRLEMA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + + +I+ +   F W+ DFP +E+NE+EK+    H+PFTMP+        +D  S+KA  
Sbjct: 421 RRMNMIDPDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHADLDKLESDPGSVKAIA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R + ++V  + F  +G+S E   ++FG +  AFQ G PPH G A 
Sbjct: 481 YDMVLNGVEIGGGSLRIYQADVQEKVFKAIGLSIEEARSKFGFMLDAFQYGAPPHAGCAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QL+EL ++
Sbjct: 541 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIK 589


>gi|262039241|ref|ZP_06012559.1| aspartate--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261746735|gb|EEY34256.1| aspartate--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 591

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 235/597 (39%), Positives = 372/597 (62%), Gaps = 17/597 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR +   +L + +VG  V LSGW+ ++R  G  +F+D+RD YG+TQ+  N + +  E+ +
Sbjct: 2   YRNYKLNELRIENVGEEVTLSGWISKIRDKGHFVFIDLRDRYGVTQIFINEEVSGKELQE 61

Query: 64  SVR---SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            V+   +EWV+ + G+V+ RS++  N NI TG IE+ A++IE+LS +++LP  +      
Sbjct: 62  KVKKFKNEWVIKVKGVVVERSSK--NPNIPTGDIEIQAKEIEVLSQSKQLPFEIDETGNL 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR  YR+LD+RR  +  NI+KR  ++ S+R  M    F++  TPIL  ++PEGARDF
Sbjct: 120 NENIRLTYRYLDIRRPKMLNNIIKRNDMLFSIRKFMNENGFLDVDTPILAKATPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQ+LM +G D+Y+Q+A CFRDED R+DR P EF QLD+E
Sbjct: 180 VVPSRINKGDFYALPQSPQLFKQILMVAGIDKYYQLAKCFRDEDLRADRQP-EFTQLDVE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+LN ME + + VFE+ + G  V+  F R+ YDDA+  YG+DKPDLR  + + 
Sbjct: 239 MSFVEQEDVLNVMEKLAKKVFEDVT-GEKVTETFERMTYDDAMNNYGSDKPDLRFDMKLI 297

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQ-PGLAY 358
           ++++   +  F VF    +V  G  V A+ A KG   +R +   + ++ ++  +  GLAY
Sbjct: 298 DLSKEVENCGFGVFEN--AVKEGGNVKALVAPKGEIFSRKYIKDLEDYVKTYFKAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  ++DE+G +    P+AK       + I  +L++++ ++   +A             R 
Sbjct: 356 I--KIDENGEIN--SPIAKFFTEETMQKIIQKLNIKNNETALILADKYKTVHDGLGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLSI 477
            + +ELG+I+ + ++F W++DFP +EW+EEE +    H+PFT +     + L  N+L  I
Sbjct: 412 KLGEELGLIDKDAYKFLWVVDFPMFEWSEEENRYKAQHHPFTSIKVEDRKYLDTNELDKI 471

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K   YD+V NG+EI  G IR H  E+  + F  +G+ KE  + +FG      + G+PPHG
Sbjct: 472 KTDSYDMVLNGYEIGGGSIRIHDEELQEKVFEKLGLGKEEQQEKFGFFLEVLKYGVPPHG 531

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE-LGLRIVE 593
           G+A GIDR +M +L   +++EV  FP +    DL+ G+P+ V  + L E L L+++E
Sbjct: 532 GLAFGIDRWLMAMLKENSIKEVIPFPKTNKGQDLMTGAPAGVEEKVLEEDLNLKLLE 588


>gi|317484492|ref|ZP_07943402.1| aspartyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316924268|gb|EFV45444.1| aspartyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 607

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/590 (40%), Positives = 361/590 (61%), Gaps = 16/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG+L  +D G+ V L GWV   R HGG+IF+D+RD +G+TQ+V +P+ A    E A
Sbjct: 20  RTHTCGELTGADNGAEVCLMGWVQYRRDHGGLIFVDLRDRFGLTQIVFSPEYAPEAHEQA 79

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++RSE+VL + G V  R    +N N+ TG++E+   + ++L+ ++  P  +    E  E
Sbjct: 80  GALRSEYVLAMKGKVRPRPEGMVNPNLKTGEVEVVVSEWKLLNTSKTPPFQIEDRVEAGE 139

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R ++R+LDLRR  + +N+  R+R   ++R  + ++ F+E  TPILT S+PEGARD+LV
Sbjct: 140 NLRLQWRYLDLRRPRMARNLALRSRTAMAIRNELASQGFLEVETPILTKSTPEGARDYLV 199

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQQ+KQ  M +G DRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 200 PSRLNHGQFYALPQSPQQFKQFCMIAGLDRYFQIARCFRDEDLRADRQP-EFTQVDIEMS 258

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F ++  +++  E ++  VF+E + G  +   F R+ +D+A+ RYG DKPD R  + + +V
Sbjct: 259 FADEKQVMDMAEGLMIRVFKE-ALGADIPAPFPRMTWDEAMSRYGVDKPDTRFGLELQDV 317

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T    +S F++F+    V       A+   GG    R   D + E+ +  G  GLA+I  
Sbjct: 318 TSIVSNSGFKLFASAKLVK------AMRVPGGESLTRKEIDELTEFVKIYGAQGLAWIKI 371

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R +E        P+AK L+      +   L +  GD  FF AG+P    +   + R H+ 
Sbjct: 372 RENE-----WQSPIAKFLSDEERAGLTEALGLSVGDIVFFQAGEPGMVNAALGNLRVHLG 426

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++LG+I  N + F W+ DFP YE++EEE +    H+PFT P+ G      ++  + KA  
Sbjct: 427 EKLGLIPENAWNFLWVTDFPLYEYSEEENRYVACHHPFTAPKDGDLEKMVSEPAATKARA 486

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H + V  + F  +G SKE  E++FG   +A + G PPHGGIA 
Sbjct: 487 YDMVLNGNEVGGGSIRIHEAAVQRKMFEALGFSKESYESQFGYFIQALEHGAPPHGGIAF 546

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++ML+  + ++R+V  FP +Q    L+  +P  VS +QLRELGLR+
Sbjct: 547 GLDRLIMLMSDSPSIRDVIAFPKTQKATCLMTNAPDIVSAKQLRELGLRL 596


>gi|212638575|ref|YP_002315095.1| aspartyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|226735098|sp|B7GFR1|SYD_ANOFW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|212560055|gb|ACJ33110.1| Aspartyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 592

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/596 (40%), Positives = 355/596 (59%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG++    +G  VRL GWV + R  GG+IF+D+RD  GI Q+V +PD +    ++A
Sbjct: 4   RTHYCGEVTDMAIGQTVRLKGWVQKRRDLGGLIFIDLRDRTGIVQIVFSPDVSKEALQVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    +N N+ TG IE+ A  + ILS A+  P  +  + +  E
Sbjct: 64  ETIRSEYVLDVEGTVVQREEGQVNPNLPTGTIEVHAMHVTILSEAKTPPFLISDKTDVSE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + +    R ++  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFQTFKMRHQVTKAIRDFLDEEGFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GF+RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHPGEFYALPQSPQIFKQLLMVAGFERYYQIARCFRDEDLRADRQP-EFTQVDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QDDIL  +E ++  V  + + G  +S  F R+ YD+AI RYG+DKPD R  + + ++
Sbjct: 243 FMSQDDILAMIERMMARVM-KVAKGVDISIPFPRMSYDEAIARYGSDKPDTRFGLELVDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI  KG     +R   D + E+    G  GLA++ 
Sbjct: 302 SEQVKDCGFKVFAS--AVQNGGQVKAINVKGAADKYSRKDIDALTEYVARYGAKGLAWLK 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+AK       + +   L+ + GD   F+A             R  +
Sbjct: 360 VEAD-----GLKGPIAKFFTEDEQKQMMQTLEAETGDLLLFVADKKSVVADALGALRLKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L +I+ + F F WI D+P +E++EEE +   AH+PFTMP          D  S++A 
Sbjct: 415 GKDLQLIDESAFHFLWITDWPLFEYDEEEGRYYAAHHPFTMPVREDVPKFETDPASVRAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R    ++  + F  +G ++E    +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIFERDIQEKMFKTLGFTEEQAREQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VMLL G  N+R+   FP + +   LL  +PS VS EQL EL LRI +  K
Sbjct: 535 LGLDRLVMLLAGRSNLRDTIAFPKTASASCLLTEAPSAVSEEQLEELHLRIKDVQK 590


>gi|303229389|ref|ZP_07316179.1| aspartate--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515925|gb|EFL57877.1| aspartate--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 600

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/589 (39%), Positives = 360/589 (61%), Gaps = 9/589 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
           +RTH CG +  ++VG  V L GWV R R HGG+IFLD+RD  GI QVVA+PD     F  
Sbjct: 8   HRTHGCGTISEAEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGIVQVVASPDHNVESFHK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VLC+ G +  R  E IN N+ TG  E+  +++ +L+ A+  P  +    +  
Sbjct: 68  AEDVRNEYVLCVRGKITKRDEEAINPNLPTGAYEMYCEELRVLNSAKTPPFYIQDNIDVD 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + +N++ R ++  +MR    + +F+E  TP+LT S+PEGARD+L
Sbjct: 128 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 188 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDLEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++DI   +E ++  VF++ + G  +     RI +D+A+ +YG+DKPDLR  +   +
Sbjct: 247 SFVDEEDIYALLEQMVAEVFKK-TLGKEIPLPMPRITWDEAMDKYGSDKPDLRFDMAFTD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VTE    +EF+VF  ++      +   +P   G   R   D +  +    G  GLA+  +
Sbjct: 306 VTELVKDTEFKVFRSVIDNGGIVKGIVVPGDAGIPRREL-DDLVAYVNRYGAKGLAWACF 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             +E G++     + K L       I  ++  + GD    IA  P        + R  +A
Sbjct: 365 --NEDGSIKSQ--IMKFLGEDTIRNIGEKMGAKGGDLVLMIADKPATVARALGELRLEMA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + + +I+ +   F W+ DFP +E+NE+EK+    H+PFTMP+        +D  S+KA  
Sbjct: 421 RRMNMIDEDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHEDLDKLQSDPGSVKAIA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R + S+V  + F  +G+S+E  +++FG +  AF+ G PPH G A 
Sbjct: 481 YDMVLNGVEIGGGSLRIYQSDVQEKVFKAIGLSEEEAKSKFGFMLDAFKYGAPPHAGCAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QL+EL ++
Sbjct: 541 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIK 589


>gi|56963342|ref|YP_175073.1| aspartyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|62287530|sp|Q5WHP3|SYD_BACSK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56909585|dbj|BAD64112.1| aspartyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 589

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/592 (40%), Positives = 354/592 (59%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG L  +  G  V+L GWV R R  G +IFLD+RD  GI QVV +P+ +    + A
Sbjct: 3   RTHHCGQLDKTLAGQQVQLKGWVQRRRDLGQVIFLDLRDRSGIVQVVCSPEVSEEALKAA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR+E+++ + G+V+ R+ + +N  + TG IE+  +++EIL+V++ LP  +  + +  E
Sbjct: 63  DRVRNEYLVAVSGIVVERNEQAVNDKLATGAIEVHVRELEILNVSKSLPFQIEADTDAAE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + +    R +I+ S+R  + A+ ++E  TP+LT S+PEGARD+LV
Sbjct: 123 DVRLKYRYLDLRRPDMQEAFAMRHKIMKSVRDFLDADGYLEIETPMLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SGF++YFQI  CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVHHGQFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++ +DIL   E ++  + +E ++G  +   F R+ Y++A+ RYG+DKPD R  + +  +
Sbjct: 242 FLDTEDILAMTEAMMEKLLKE-THGLELKRPFSRMTYEEAMNRYGSDKPDTRFGMELIEL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++    +EF+VF   L    G  +  +  KGG    +R   D + ++ +  G  GLA++ 
Sbjct: 301 SDVLKDTEFKVFKGALEA--GGIIKGLTLKGGADKLSRKDIDALADFVKPYGAKGLAWL- 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++D+ G     GP+AK  N   T A+   +D + GD  FF A             R   
Sbjct: 358 -KVDDEGI---KGPIAKFFNEAQTAALLAAMDAEAGDLLFFGADKKQVVFHALGALRLKF 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +E  +I+ N F F W+ DFP  E++E+ K+    H+PFT P+     L       ++A 
Sbjct: 414 GKEFQLIDENAFHFLWVTDFPLVEYDEQAKRFVALHHPFTRPKAEDLDLMETHPEQVRAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NGFE+  G  R +  E+  + F  +G S E  +  FG L  AF  G PPHGGIA
Sbjct: 474 AYDLVLNGFELGGGSQRIYERELQEKMFKLLGFSSEAAKEEFGFLLEAFDYGTPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DRIVMLL    N+REV  FP + +  DLL  +P+ VSVEQL +L L I+
Sbjct: 534 LGLDRIVMLLARKSNLREVIAFPKTASASDLLTEAPNKVSVEQLIDLNLSII 585


>gi|282901704|ref|ZP_06309620.1| Aspartyl-tRNA synthetase [Cylindrospermopsis raciborskii CS-505]
 gi|281193467|gb|EFA68448.1| Aspartyl-tRNA synthetase [Cylindrospermopsis raciborskii CS-505]
          Length = 598

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 251/607 (41%), Positives = 366/607 (60%), Gaps = 27/607 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG+     +G  V L GWV R R HGG+IFLD+RD  GI QVV++P      ++IA
Sbjct: 2   RTHYCGEPRKHHIGENVILYGWVDRHRDHGGVIFLDLRDRSGIVQVVSDPQRTPESYQIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF-GERE- 119
            S+R+E+VL I G V  R AE++N  ++TG++E+ A  IE+L SV++ LP  V  GE E 
Sbjct: 62  NSIRNEYVLKITGRVTERPAESLNPRLVTGEVEVYADHIELLNSVSKNLPFQVSSGETEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRR+ + KNI  R +++ +MR  +   E FIE  TP+LT S+PEGAR
Sbjct: 122 VREDVRLKYRYLDLRRERMAKNIQLRHQVVKAMRRYLEDQEGFIEIETPVLTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+++PSRVN+G ++ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYILPSRVNEGQWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +++I+   E ++  +F+   + + + + F R+ Y DA+ +YGTDKPD R  + 
Sbjct: 241 MEMSFMSEEEIIQLNEKLVCHIFKTVQDID-LPHPFPRLRYQDAMNKYGTDKPDTRYGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARS 350
           + +V++      F+VF  +++     ++  IP     GN A          D   E A +
Sbjct: 300 LVDVSDVVQDCGFKVFRDVVAGGGMVKILPIPH----GNDAISNVRIKPGGDIFREAAEA 355

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
            G  GLAYI  R+ ++G +  +G +  +L     + I  R   ++G    F A D     
Sbjct: 356 -GAKGLAYI--RVRDNGEIDTIGAIKDNLTAAQKQEILTRTAAKEGHLLLFAAADASVVN 412

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                 R  IA+E  +I      F WI +FP +EWN  EK+++  H+PFT P        
Sbjct: 413 KTLDRLRQFIAREFNLIPPGKINFLWITEFPMFEWNANEKRLEALHHPFTAPHPD----D 468

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            +DL + +A  YDLV NGFE+  G +R +  E+  + F  +G+S E   N+FG L  AF+
Sbjct: 469 LHDLKTARAQAYDLVLNGFEVGGGSLRIYQREIQARVFETIGLSSEEARNKFGFLLEAFE 528

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR+VMLL   +++R+V  FP +Q    LL  +P+TV ++QL+EL + 
Sbjct: 529 YGTPPHGGIAYGVDRLVMLLAQEESIRDVIAFPKTQQARCLLTDAPATVEIKQLKELHVN 588

Query: 591 IVENPKK 597
               PK+
Sbjct: 589 STVKPKE 595


>gi|300863909|ref|ZP_07108827.1| Aspartyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300338095|emb|CBN53973.1| Aspartyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 595

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/605 (42%), Positives = 362/605 (59%), Gaps = 25/605 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG L    +G  V L GWV R R HGG+IFLD+RD  G+ Q+V++P      +E A
Sbjct: 2   RTHYCGQLLSDRIGETVTLCGWVDRRRDHGGVIFLDLRDRTGLVQIVSDPQRTPTSYEAA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV-FGERE- 119
             +RSE+V+ I G V  R  +++N  + TG++E+ A +IE+L +V ++LP  V   E E 
Sbjct: 62  DHLRSEYVVRITGKVTRRPEDSLNPKLATGEVEVYAHEIELLNAVRKQLPFQVSTAETES 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRRD + +N+  R +++ ++R  +  AENFIE  TPILT S+PEGAR
Sbjct: 122 VREDLRLKYRYLDLRRDRMSRNLQLRHQVVKAIRRHLEDAENFIEVETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G +YALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGEWYALPQSPQLFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+  ++IL   E +   +F+    G  +   F R+ Y +A+ RYG+DKPD R  + 
Sbjct: 241 MEMSFMSLEEILELNEGLTCHIFKTV-KGIDLHLPFPRLTYAEAMGRYGSDKPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARSQ 351
           + +V++    S F+VFS  ++     +V  IP    GGN A  +        + + A   
Sbjct: 300 LVDVSDLMKDSGFKVFSGAVASGGIVKVLPIP----GGNDAISNVRIKPGGDLFKEANEA 355

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLAYI  R+ ++G +  +G +  +L     + +  R   + G    F AGD      
Sbjct: 356 GAKGLAYI--RVRDNGEIDTIGAIKDNLKEEQKQELLTRTGAEPGHLLLFGAGDAPTVNK 413

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
                R  + QELG+I+ +     W+ DFP +EWN +EK+++  H+PFT P         
Sbjct: 414 TLDRLRLAVGQELGLIDKDKMNLLWVTDFPMFEWNADEKRLEALHHPFTAPHPD----DI 469

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           NDL + +A  YDLV NG E+  G  R +  E+  + F  +G+S E   N+FG L  AF+ 
Sbjct: 470 NDLKTARAQAYDLVLNGTEVGGGSRRIYQREIQEKVFEAIGLSTEEAYNKFGFLLDAFEY 529

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +PS V  +QL+EL ++ 
Sbjct: 530 GTPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQAGCLLTNAPSGVDDKQLKELHVQS 589

Query: 592 VENPK 596
              PK
Sbjct: 590 TAKPK 594


>gi|206901021|ref|YP_002250688.1| aspartyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|238064705|sp|B5YDT0|SYD_DICT6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|206740124|gb|ACI19182.1| aspartyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 593

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/590 (41%), Positives = 350/590 (59%), Gaps = 11/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTH CG++ + +VG  V LSGWVHR+R HGG+IF+D+RD  GI Q+V +P      + IA
Sbjct: 3   RTHYCGEINIKNVGEKVSLSGWVHRIRHHGGLIFIDLRDRSGIVQLVVDPAISQESYNIA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++ +EWV+ ++G V  R     N  I TG+IE+  +KI I + ++ LP  ++  +E  E
Sbjct: 63  DTLGNEWVISVEGKVRKRPEGMENPKIPTGEIEIEVEKINIENPSKPLPFNLWSNKEIDE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRRD +  NI+ R   I ++R  +    FIE  TP L  S+PEGARDF++
Sbjct: 123 TVRLKYRYLDLRRDKMQSNIIFRHNFILAIRNFLAQNGFIEIETPYLIVSTPEGARDFII 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQ+LM SGFDRYFQIA CFRDED R+DR P EF QLDMEMS
Sbjct: 183 PSRLQPGKFYALPQSPQLFKQILMVSGFDRYFQIARCFRDEDLRADRQP-EFTQLDMEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE +DI N +EN+ +   +   N + ++  F RI Y++A+  YG+DKPDLR  + + +V
Sbjct: 242 FVEIEDIFNIIENLFKTTLKNLMNID-ITVPFPRITYEEAMNTYGSDKPDLRYDLKISDV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE F +         L  N    +  I  K    +R     +    R     G   I W 
Sbjct: 301 TEIFKNLPLEFIRSTLEKNGV--IKGIILKNIVPSRREWSIIENKVRELKGKG---IMWF 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G +     ++K+L+      +   L++++GDS F IAG+  +        R  IA+
Sbjct: 356 TYTDGELK--SSISKYLDENTKNKLIENLNLREGDSFFCIAGEWKEVVKILGTLRLEIAE 413

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              I       F W+ DFP +E++EEE++I   H+PFT P+     L   D L +KA  Y
Sbjct: 414 LFNIEKKEGLYFLWVTDFPLFEYDEEERRIVAEHHPFTSPKDEDIPLLDTDPLKVKAKCY 473

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+ SG IR H  E+  + F+ + I+ E  + +FG L  AF+ G PPHGGIA G
Sbjct: 474 DLVLNGTELGSGSIRIHKKEIQEKVFNILNITPEDAKKKFGFLLEAFEYGAPPHGGIALG 533

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IDRI+ +L  + ++R+V  FP +Q+   LL G+PS V  +QL E+ +R+V
Sbjct: 534 IDRIIAILTKSNSLRDVIAFPKTQSGTCLLTGAPSEVDSKQLEEVHIRVV 583


>gi|169831069|ref|YP_001717051.1| aspartyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169637913|gb|ACA59419.1| aspartyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 601

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/594 (41%), Positives = 351/594 (59%), Gaps = 11/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTHSCG L   +VG  V + GWV   R HGG++F+D+RD  G+ QVV +P D   F  A+
Sbjct: 11  RTHSCGSLSRKEVGLRVVVMGWVDSRRDHGGLVFVDLRDRSGVVQVVFSPEDRKSFTKAQ 70

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+VL + G V  R A T N  + TG+IE+ A++  IL+ A      +    E  E+
Sbjct: 71  TLRSEYVLAVAGTVRRRPAGTENPKLSTGEIEIQAEEARILNRARTPVFYIEDGVEVDEN 130

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR+LDLRR  + + +  R R   ++R  + +  F E  TP LT S+PEGARD+LVP
Sbjct: 131 LRLRYRYLDLRRPEMQRTLEFRHRAAKAVRDFLDSRGFWEIETPFLTRSTPEGARDYLVP 190

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+N G FYALPQ+PQ +KQLLM SG +RYFQI  CFRDED R+DR P EF Q+D+EMSF
Sbjct: 191 SRLNPGKFYALPQSPQLFKQLLMVSGCERYFQIVRCFRDEDLRADRQP-EFTQIDLEMSF 249

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+  D++  +E ++  ++ E + G  +   F RI Y DA+ R+GTDKPDLR  + +H+VT
Sbjct: 250 VDSGDVMALVEEMVAALYRE-TTGVELEIPFPRITYADAMDRFGTDKPDLRYGMELHDVT 308

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +      F+VF  +     G  V  I   GG   +R   D +  +A   G  GLAY+ + 
Sbjct: 309 DVAAGCGFKVFQTV--AGGGGRVKGISVPGGAVFSRKELDDLTRFAGQYGARGLAYLLY- 365

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G  +   P+AK       EA+  RL+   GD   F+A  P    +  +  R H+A+
Sbjct: 366 -TEEGIRS---PIAKFFTAGELEALVRRLEAVPGDLLLFVADRPAVVAAALSALRRHLAE 421

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            LG+I+ +  EF W+ +FP  E++E+EK+    H+PFT P     +L   +   ++A  Y
Sbjct: 422 RLGLIDRSRNEFVWVREFPLLEYDEDEKRFVAVHHPFTAPVEEDIALLTVEPARVRARAY 481

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG EI  G IR H  +V    FS +G+    V+ +FG L  AF+ G PPHGG A G
Sbjct: 482 DLVLNGVEIGGGSIRIHRRDVQELVFSAIGLEPGEVKEKFGFLLEAFEYGTPPHGGFAVG 541

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            DR+VML  G + +R+V  FP +Q+  DL+ G+P  V+  QLRELG+ +   PK
Sbjct: 542 FDRLVMLAAGKQTIRDVMAFPKTQSGTDLMTGAPDAVAPAQLRELGIIVASKPK 595


>gi|229006737|ref|ZP_04164371.1| Aspartyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228754598|gb|EEM04009.1| Aspartyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 591

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/591 (40%), Positives = 356/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPEISKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGQGAINENMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  ++R  + +E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMYNTFKMRHDVTKTIRNFLDSEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQ+PQ +KQLLM  GF+ Y+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHEGEFYALPQSPQLFKQLLMVGGFECYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL  ME ++  V ++ + G  V   F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILEMMERMMTKVMKD-AKGVEVRAPFPRMKYADAMARYGSDKPDTRFAMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V    +V AI AKG  G  +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAADCGFKVFTS--AVESSGQVKAINAKGAAGKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   LD   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLDGAAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTDAPSPVAEAQLEELYLQL 585


>gi|238926284|ref|ZP_04658044.1| aspartyl-tRNA synthetase [Selenomonas flueggei ATCC 43531]
 gi|238885964|gb|EEQ49602.1| aspartyl-tRNA synthetase [Selenomonas flueggei ATCC 43531]
          Length = 598

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/597 (40%), Positives = 358/597 (59%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH CG L    VG  V L GWV R R HGG+IF+D+RD  G  Q+V   A      F  
Sbjct: 9   RTHGCGILRKEQVGEEVTLCGWVSRRRDHGGLIFVDMRDRSGFVQIVFDEAAMAEGTFHE 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++RSE+VLC+ G V +RSAET+N N+ TG+IE+   ++ IL+ A+  P  +    +  
Sbjct: 69  AETLRSEFVLCVRGTVRARSAETVNPNMATGEIEIVVSELRILNKAKTPPFYIQDGVDVD 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR +YR+LDLRR  +  N++ R R+   MR       F+E  TP+L  S+PEGARDFL
Sbjct: 129 EMIRLRYRYLDLRRPEMQANMILRHRVTKIMRDFFDRSGFLEIETPMLCKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM SGF++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 189 VPSRLNPGEFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQP-EFTQLDIEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++QD IL  ME +++ +FE+ S G  +   F R+ +D+A+ R+G+DKPDLR  + + +
Sbjct: 248 SFMDQDSILTLMEGMVKELFEK-SIGAKIETPFQRMSWDEAMDRFGSDKPDLRFGMELQD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +T++   S+F+VF+ ++    G  V  I  +G     R   D +  + +  G  GLA+I 
Sbjct: 307 ITDYVGGSDFKVFNAVMEA--GGRVKVINVEGYANIPRRELDGLVSYVQGYGAKGLAWIQ 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E G  +   P  K  +    E I+  +  + GD    +A  PL       + R  +
Sbjct: 365 Y--TEEGVKS---PFKKFYSDETFETIKNAVGAKTGDLLLVVADQPLVVAQALGELRLEM 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +  G+I+ +   F W++DFP +E++ EEK+    H+PFT P+        +D   +KA 
Sbjct: 420 GRRRGLIDPDALRFLWVVDFPMFEYSAEEKRYKAMHHPFTAPRDEDVPFLKSDPGRVKAN 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R + S++  Q F  +G + E    RFG +  AF+ G PPHGG+A
Sbjct: 480 AYDMVLNGVEIGGGSLRIYSSDLQEQVFEALGFTPEEARARFGFMMNAFEYGTPPHGGLA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML+   +++R+V  FP +Q+  D++  +P+TV  +QLREL +R     KK
Sbjct: 540 FGLDRLVMLMAKRRSIRDVIAFPKTQSASDVMSEAPATVDEKQLRELYIRTAVPKKK 596


>gi|269798267|ref|YP_003312167.1| aspartyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094896|gb|ACZ24887.1| aspartyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 601

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 233/589 (39%), Positives = 358/589 (60%), Gaps = 9/589 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
           +RTH CG +   +VG  V L GWV R R HGG+IFLD+RD  G+ QVVA+PD     F  
Sbjct: 8   HRTHGCGTISEQEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGVVQVVASPDHNVESFHK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VLC+ G +  R    IN N+ TG  E+  +++ +L+ A+  P  +  + +  
Sbjct: 68  AEDVRNEYVLCVRGTITKRDDSAINPNLPTGAYEMFCEELRVLNSAKTPPFYIQDDIDVD 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + +N++ R ++  +MR    + +F+E  TP+LT S+PEGARD+L
Sbjct: 128 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 188 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDLEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++DI   +E ++  VF+  + G  +S    RI +D+A+ +YG+DKPDLR  +   +
Sbjct: 247 SFVDEEDIYALLEEMIAHVFKT-ALGKEISLPMPRITWDEAMDKYGSDKPDLRFDMAFTD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VT+    +EF+VF  ++      +   +P   G   R   D + E+    G  GLA+  +
Sbjct: 306 VTDLVKDTEFKVFRSVIDNGGVVKGIVVPGDAGIPRREL-DDLVEYVNRYGAKGLAWACF 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             +E G++     + K L       I  ++  + GD    IA  P        + R  +A
Sbjct: 365 --NEDGSIKSQ--IMKFLGEDTIRNIGEKMGAKGGDLVLMIADKPATVARALGELRLEMA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + + +I+ +   F W+ DFP +E+NE+EK+    H+PFTMP+        +D  S+KA  
Sbjct: 421 RRMNMIDQDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHADLDKLESDPGSVKAIA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R + ++V  + F  +G+S E   ++FG +  AFQ G PPH G A 
Sbjct: 481 YDMVLNGVEIGGGSLRIYQADVQEKVFKAIGLSIEEARSKFGFMLDAFQYGAPPHAGCAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QL+EL ++
Sbjct: 541 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIK 589


>gi|288555366|ref|YP_003427301.1| aspartyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288546526|gb|ADC50409.1| aspartyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 595

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/595 (40%), Positives = 358/595 (60%), Gaps = 15/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L    VG  V+L GWV + R  G +IFLD+RD  GI QVV +P+      E A
Sbjct: 4   RTHHCGELRSEHVGETVQLKGWVQKRRDLGNVIFLDLRDRSGIVQVVFSPEVNKEALETA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+VL ++G V++R A T+N  I TG IE+   K+E+L+ ++ LP  +  + +  E
Sbjct: 64  ERVRNEYVLEVEGTVVARDARTVNDKIETGTIEIHVTKVEVLNASKSLPFQIEADTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLRR  + +    R +    +R  +  E F+E  TP+LT S+PEGARD+LV
Sbjct: 124 DVRLRYRYLDLRRPDMQETFKLRHKTTKLIRNFLDEEAFLEIETPMLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SGF+RY+Q+  CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHHGEFYALPQSPQIFKQLLMVSGFERYYQVVRCFRDEDLRADRQP-EFTQIDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++D+L+  E ++  V +E + G  VS    R+ YD+A+ RYG+DKPD R  + +  +
Sbjct: 243 FMDKEDLLSMTEKMMAKVLKE-TKGVEVSLPMPRLTYDEAMNRYGSDKPDTRFEMELIEL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++    S F+VF+   ++N G  V  +  KGG    +R   D + E+ +  G  GLA++ 
Sbjct: 302 SDVVRDSSFKVFTS--AINGGGIVKGLNLKGGASKMSRKEIDALTEFVKPYGAKGLAWLK 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419
              D        GP+AK     + E +   ++ ++GD  FF A    + F S  A  R  
Sbjct: 360 VEAD-----GLKGPIAKFFEGEHAENLLSAMNGEEGDLLFFAADKAQVVFDSLGA-LRLK 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
             +E  +I+ + F F W++DFP  E++E+ K+    H+PFT P+     L   D  S++A
Sbjct: 414 FGKEFDLIDKDAFNFLWVVDFPLVEYDEDAKRYVALHHPFTSPKKADRDLLATDPASVRA 473

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+E+  G  R +  E+    F  +G S+E  + +FG L  AF+ G PPHGGI
Sbjct: 474 EAYDLVLNGYELGGGSQRIYEREIQEHMFRALGFSEEEAKEQFGFLLEAFEYGTPPHGGI 533

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR++MLL G  N+R+   FP + +   LL  +PS VS++QL +L L I+ N
Sbjct: 534 ALGLDRLIMLLAGRTNLRDTIAFPKTASASCLLTNAPSEVSLDQLIDLNLSIIGN 588


>gi|294792128|ref|ZP_06757276.1| aspartate--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294793999|ref|ZP_06759136.1| aspartate--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455569|gb|EFG23941.1| aspartate--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294457358|gb|EFG25720.1| aspartate--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 601

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 233/589 (39%), Positives = 358/589 (60%), Gaps = 9/589 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
           +RTH CG +   +VG  V L GWV R R HGG+IFLD+RD  G+ QVVA+PD     F  
Sbjct: 8   HRTHGCGTISEQEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGVVQVVASPDHNVESFHK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VLC+ G +  R    IN N+ TG  E+  +++ +L+ A+  P  +  + +  
Sbjct: 68  AEDVRNEYVLCVRGKITKRDEAAINPNLPTGAYEMFCEELRVLNSAKTPPFYIQDDIDVD 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + +N++ R ++  +MR    + +F+E  TP+LT S+PEGARD+L
Sbjct: 128 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 188 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDLEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++DI   +E ++  VF+  + G  +S    RI +D+A+ +YG+DKPDLR  +   +
Sbjct: 247 SFVDEEDIYALLEEMIAHVFKT-ALGKEISLPMPRITWDEAMDKYGSDKPDLRFDMAFTD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VT+    +EF+VF  ++      +   +P   G   R   D + E+    G  GLA+  +
Sbjct: 306 VTDLVKDTEFKVFRSVIDNGGVVKGIVVPGDAGIPRREL-DDLVEYVNRYGAKGLAWACF 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             +E G++     + K L       I  ++  + GD    IA  P        + R  +A
Sbjct: 365 --NEDGSIKSQ--IMKFLGEDTIRNIGEKMGAKGGDLVLMIADKPATVARALGELRLEMA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + + +I+ +   F W+ DFP +E+NE+EK+    H+PFTMP+        +D  S+KA  
Sbjct: 421 RRMNMIDQDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHADLDKLESDPGSVKAIA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R + ++V  + F  +G+S E   ++FG +  AFQ G PPH G A 
Sbjct: 481 YDMVLNGVEIGGGSLRIYQADVQEKVFKAIGLSIEEARSKFGFMLDAFQYGAPPHAGCAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QL+EL ++
Sbjct: 541 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIK 589


>gi|302036777|ref|YP_003797099.1| aspartyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|190343193|gb|ACE75581.1| aspartyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300604841|emb|CBK41174.1| Aspartyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 587

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/593 (41%), Positives = 365/593 (61%), Gaps = 15/593 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           + RTH CG+L  + VG  V L+GWV R R HG ++F+D+RD  G+TQVV N +  +A  E
Sbjct: 2   KIRTHRCGELTKAQVGQQVVLNGWVQRRRDHGMVLFIDLRDRTGLTQVVFNAERNAAVHE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A ++RSE V+ + G VM+R  E+ N N+ TG+IE+ A  +EIL+ A+  P  +  + E 
Sbjct: 62  AAHTLRSECVVSVTGQVMARPDESKNPNLPTGEIEVFADAVEILNEAKTPPFMIEDDIEI 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            ES+R KYR+LDLRR  + + +  R  I+ ++R  + AE F+E  TP+LT S+PEGARD+
Sbjct: 122 TESLRLKYRYLDLRRPRMQRLLGLRHGIMQAVRTFLNAEQFLEVETPVLTKSTPEGARDY 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRVN G FYALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 182 LVPSRVNPGMFYALPQSPQLFKQVLMVSGVDRYYQIARCFRDEDLRNDRQP-EFTQIDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+++ +++ ME ++  VF++ + G  +   F R+ Y DA+ RYG+DKPDLR  + +H
Sbjct: 241 MSFVDREQVMSLMERMIVSVFKD-AGGVQLPTPFPRMTYADAMGRYGSDKPDLRFDLPLH 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           +VT     S+F+VF +  +   G  V A+   GG    R+  D + E A+S G  GLA++
Sbjct: 300 DVTAFAAKSDFKVFKE--AATKGGLVKALVVSGGASIARSRIDALGETAKSFGAKGLAWL 357

Query: 360 FWRLDESGNVAGMGPVAKHLNI-VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
             ++   G +  +  +AK L+     EA+    + + GD   F A  P          R 
Sbjct: 358 --KITADGQLESV--IAKFLDAKAFAEALP---EAKPGDLVLFGADKPAIVHDVLGRIRL 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL +I+   ++  W+ +FP  +++ EEK+  F HNPF  P          + L  +
Sbjct: 411 LLGEELNLIDKTAWKPLWVTEFPLLDYSPEEKRYIFMHNPFAAPMDEDLPFLDTEPLRAR 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG EI  G IRNH S++  +    +GI KE  + +FG L  A + G PPHGG
Sbjct: 471 AKAYDMVLNGSEIGGGSIRNHRSDIQFRILDLLGIGKEQAQAKFGFLLEALEYGAPPHGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IA G+DR++MLL GA ++R+V  FP +Q     L  +PS VS +QL+EL +++
Sbjct: 531 IAFGLDRLIMLLGGADSIRDVIAFPKTQRAQCPLTEAPSGVSADQLKELRIKL 583


>gi|46581768|ref|YP_012576.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|62287574|sp|Q725Q7|SYD_DESVH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|46451191|gb|AAS97836.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311232327|gb|ADP85181.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 610

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/595 (41%), Positives = 359/595 (60%), Gaps = 14/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTHSC +L  +DVG+ V + GWV   R HGG+IF+D+RD  G+TQVV +PD A    + A
Sbjct: 24  RTHSCCELTAADVGNDVCIMGWVQYRRDHGGLIFVDLRDRKGLTQVVFSPDFAPEAHKDA 83

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VRSE+VL I G V  R     N  + TG+IE+   + ++L+ ++  P  +    E  E
Sbjct: 84  HIVRSEYVLAIRGRVRPRPEGMTNPGMKTGEIEVVVSEWKLLNTSKTPPFLIEDRTEASE 143

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R  +R+LDLRR  + +N + R R   S R  +   +F+E  TP LT ++PEGARDFLV
Sbjct: 144 NLRLAWRYLDLRRPRMARNFMLRHRAAQSARRYLDELDFLEIETPYLTKATPEGARDFLV 203

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR   EF Q+D+EMS
Sbjct: 204 PSRLNHGMFYALPQSPQIFKQLLMVSGMDRYYQIVRCFRDEDMRADR-QLEFTQIDIEMS 262

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ +++  E ++  V ++ + G  V+  F R+ YD A+  YG DKPD R  + + +V
Sbjct: 263 FVDEERVMSMAEGLMSRVMKD-TLGVDVTVPFPRMTYDQAMGEYGVDKPDTRFDLRLKDV 321

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+    SEF++F+K     P  +   +P  G    R   D   E+ +  G  GLA+I  R
Sbjct: 322 TDAVRGSEFKLFAKA----PLVKAMRVPG-GETMTRKEIDEFTEFVKIYGAQGLAWIKIR 376

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E        P+AK L+     A+   L ++ GD  FF AG+P    +   + R  + Q
Sbjct: 377 EGE-----WQSPIAKFLSEAERAALVAALGLEVGDIVFFQAGEPGMVNAALGNLRVKLGQ 431

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            LG+I  + + F W+ DFP +E++EEEK+    H+PFT P+ G   L  +D  + +A  Y
Sbjct: 432 HLGLIPEDTYNFLWVTDFPLFEYDEEEKRYVACHHPFTSPKDGHFDLMTSDPAAARARAY 491

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H +EV  + F+ +G+  +  E +FG L +A + G PPHGGIA G
Sbjct: 492 DMVLNGYELGGGSIRIHSAEVQRRMFAALGLDPQEAEEKFGFLIQALEHGAPPHGGIAFG 551

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G+ ++R+V  FP +Q    L+  +P  VS  QLR+LG+R+ E P++
Sbjct: 552 MDRLVMLLTGSPSIRDVIAFPKTQKATCLMTQAPDAVSARQLRDLGIRLRETPQE 606


>gi|119492409|ref|ZP_01623730.1| Aspartyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119453075|gb|EAW34244.1| Aspartyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 600

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 252/609 (41%), Positives = 368/609 (60%), Gaps = 31/609 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG L  +D+G  V L GWV R R HGG+IFLD+RD +G+ Q+V++P      + IA
Sbjct: 2   RTHYCGQLRSTDIGKTVTLCGWVDRRRDHGGVIFLDLRDRHGLVQIVSDPQRTPDSYHIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYP 121
           +S+R+E+V+ I G V  R  E++N  + TG++E+ A KIE+L ++ ++LP  +      P
Sbjct: 62  ESLRNEYVVRITGRVSQRPDESLNPKLATGEVEIYADKIELLNALGKQLPFQI--STAEP 119

Query: 122 ESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPE 175
           ES+    R +YR+LD+RRD + +N+  R  ++ +MR R +   E+FIE  TPILT S+PE
Sbjct: 120 ESVKEELRLRYRYLDIRRDRMTRNLQLRHAVVKAMR-RFLEDQEHFIEIETPILTRSTPE 178

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARD+++PSRVN G ++ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF 
Sbjct: 179 GARDYVLPSRVNPGEWFALPQSPQLFKQLLMVSGMDRYYQIAHCFRDEDLRADRQP-EFT 237

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           QLDMEMSF+ Q++IL   E ++  +F+    G  +   F R+ Y +A+ RYG+DKPD R 
Sbjct: 238 QLDMEMSFMSQEEILALNEALVAHIFKAV-KGIDLPLPFPRLTYAEALNRYGSDKPDTRF 296

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWA 348
            + + +V++      F+VFS  +      ++  IP    GGN AF +        + + A
Sbjct: 297 GLELVDVSDLVKDCGFKVFSGAVKSGGIVKILPIP----GGNEAFSNVRIKPGGDLFKEA 352

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
              G  GLAYI  R+ E G +  +G +  +L+    + I  R   + G    F AG+   
Sbjct: 353 SEAGAKGLAYI--RVKEGGKLDTIGAIKDNLSEDQKQEILKRTQAKPGFLLLFGAGETNT 410

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                   R  + +ELG+I  +   F W+ DFP +EWN +EK+++  H+PFT P     +
Sbjct: 411 VNKTLDRLRLVVGEELGLIAKDQTNFLWVTDFPMFEWNADEKRLEALHHPFTAPHPDDLA 470

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
               DL + +A  YDLV NG+EI  G +R +  +V  + F  +G+S E   N+FG L  A
Sbjct: 471 ----DLKTARALAYDLVLNGYEIGGGSLRIYQRDVQEKVFETIGLSIEEAFNKFGFLLEA 526

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           F+ G PPHGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +PS V  +QL+EL 
Sbjct: 527 FEYGTPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQARCLLTNAPSKVEDKQLKELH 586

Query: 589 LRIVENPKK 597
           +     PKK
Sbjct: 587 VASTYKPKK 595


>gi|75764435|ref|ZP_00743935.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74488076|gb|EAO51792.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 580

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/586 (40%), Positives = 354/586 (60%), Gaps = 13/586 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMTTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL +
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLED 580


>gi|156743714|ref|YP_001433843.1| aspartyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|238686825|sp|A7NQH9|SYD_ROSCS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|156235042|gb|ABU59825.1| aspartyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 589

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/587 (41%), Positives = 338/587 (57%), Gaps = 9/587 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61
           YR+H+CG+L V   G  V L+GWVHR R HG +IF+D+RD YG+TQVV  +        +
Sbjct: 2   YRSHTCGELRVEHAGQEVLLAGWVHRRRDHGPLIFIDLRDRYGLTQVVFDSAAAPTAHAV 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A   R E+VL + G V+ R  E  N ++ TG IE+ A +  IL+ A+  PL +  E    
Sbjct: 62  ATDARIEYVLQVRGRVVQRPEEAYNPDLATGMIEVHATEATILNPAKNPPLYINKEGGED 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR+ + +NI+ R RI+  +R  +  E F+E  TPIL  S+PEGARD+L
Sbjct: 122 ETIRLKYRYLDLRRERMQRNIILRHRIVKFIRDFLDREGFVEIETPILIKSTPEGARDYL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ G FYALPQ+PQQ KQLLM +GFDRYFQIA CFRDED R+DR P EF QLDMEM
Sbjct: 182 VPSRLHPGKFYALPQSPQQLKQLLMVAGFDRYFQIARCFRDEDQRADRQP-EFTQLDMEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD+L+ +E +   +  E +    +   F R+ + +A+ R+G+DKPDLR  + + N
Sbjct: 241 SFVDQDDVLDIIERLFTALCREITPHKRLLTPFPRLTFAEAMERFGSDKPDLRYGLELVN 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + E    S F V    L  + G +V  +   G G  +R   D + + AR  G  GL    
Sbjct: 301 LGETVATSSFGVLRAAL--DNGGQVKGLRVPGAGHYSRKQIDEVVDLARQAGAKGL---L 355

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W +             K ++     AI  R++   GD    +A  P          R   
Sbjct: 356 WAIVPEMGGEVRSSFGKQVSPDEMTAIIRRMEGAPGDLLLIVADTPKIVAQTLDRLRREF 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
              L + + N   + W++DFP  EWN+EE++ D  H+PFT P+     L  +D   ++A 
Sbjct: 416 GARLNLADPNTLAWAWVLDFPLVEWNDEEQRWDAVHHPFTAPKDEDLHLMDSDPGKVRAK 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDL+ NG+E   G IR H  +V  + F  +GI +E    +FG +  AF+ G PPHGGIA
Sbjct: 476 AYDLILNGYEAGGGSIRIHQRDVQQRLFDLLGIDRETAMRQFGHMLEAFEYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
            GIDRI M+L     +REV  FP +Q   DL+  +PS V   QLREL
Sbjct: 536 PGIDRICMILADEVTIREVMAFPKTQQAVDLMTNAPSPVDERQLREL 582


>gi|254450036|ref|ZP_05063473.1| aspartyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198264442|gb|EDY88712.1| aspartyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 667

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 214/366 (58%), Positives = 274/366 (74%), Gaps = 5/366 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL   +VG  VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+PDS  F 
Sbjct: 1   MHAYRSHTCADLNKENVGDTVRLSGWVHRVRDHGGLLFIDLRDHYGITQVMADPDSPVFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR+EW + IDG V +R A  +N  + TG+IE+  + IE+L  A ELPL VFG++EY
Sbjct: 61  DIEKVRNEWCIRIDGEVKARDASLVNDKLPTGEIEVFIRDIEVLGAAAELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYR+LDLRR+ + KN+  R+ +++SMR RM  + F E  TPI+T+SSPEGARDF
Sbjct: 121 PEETRLKYRYLDLRREKMQKNMKLRSDVVSSMRKRMWDKGFREFQTPIITSSSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           L+PSR++ G FYALPQAPQQ+KQL+M SG+D+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LIPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ V+ G+FEEF  G  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVITGIFEEFGKGRKVDQMWEQISYRDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGN---RAFCDRMNEWARSQGQPGL 356
            V+EHF  S F +F+K+L  + G EV AIPA KG  G    R FCDRMN +A+ +G PG+
Sbjct: 301 VVSEHFRGSGFAIFAKLLEQD-GTEVRAIPAPKGPNGQPVGRKFCDRMNAFAQKEGLPGM 359

Query: 357 AYIFWR 362
            YIFWR
Sbjct: 360 GYIFWR 365



 Score =  242 bits (618), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 119/222 (53%), Positives = 150/222 (67%), Gaps = 5/222 (2%)

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
           GP+AK++    TEAIR +L +  GD+ FF+ G P  F + A  AR  I  ELG+ + N F
Sbjct: 445 GPLAKNIGPERTEAIRQQLGLTVGDAAFFLGGKPKTFETVAGKARAVIGDELGLTDLNRF 504

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIKAFQYDLVCNGFE 490
            F WI+DFP YE + E  KIDF HNPF+MPQGGM +L G   D+L    FQYDL CNG+E
Sbjct: 505 AFVWIVDFPIYERDAETGKIDFEHNPFSMPQGGMAALDGKPEDVL---GFQYDLACNGYE 561

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           + SG IRNH  E+M +AF   G  K+ VE RFGG+  AFQ G PPHGG AAG+DRIVMLL
Sbjct: 562 LVSGAIRNHRPEIMFKAFEIAGYGKDEVEKRFGGMVNAFQYGAPPHGGCAAGVDRIVMLL 621

Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
             A N+R+V +FPM+Q   DL+M +PS    EQ+REL LR++
Sbjct: 622 ADADNLRDVIMFPMNQRAEDLMMSAPSEPQNEQMRELRLRVI 663


>gi|120601079|ref|YP_965479.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|120561308|gb|ABM27052.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 610

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/595 (41%), Positives = 359/595 (60%), Gaps = 14/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTHSC +L  +DVG+ V + GWV   R HGG+IF+D+RD  G+TQVV +PD A    + A
Sbjct: 24  RTHSCCELTAADVGNDVCIMGWVQYRRDHGGLIFVDLRDRKGLTQVVFSPDFAPEAHKDA 83

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VRSE+VL I G V  R     N  + TG+IE+   + ++L+ ++  P  +    E  E
Sbjct: 84  HIVRSEYVLAIRGRVRPRPEGMTNPGMKTGEIEVVVSEWKLLNTSKTPPFLIEDRTEASE 143

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R  +R+LDLRR  + +N + R R   S R  +   +F+E  TP LT ++PEGARDFLV
Sbjct: 144 NLRLAWRYLDLRRPRMARNFMLRHRAAQSARRYLDELDFLEIETPYLTKATPEGARDFLV 203

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR   EF Q+D+EMS
Sbjct: 204 PSRLNHGMFYALPQSPQIFKQLLMVSGMDRYYQIVRCFRDEDMRADR-QLEFTQIDIEMS 262

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ +++  E ++  V ++ + G  V+  F R+ YD A+  YG DKPD R  + + +V
Sbjct: 263 FVDEERVMSMAEGLMTRVMKD-TLGVDVTLPFPRMTYDQAMGEYGVDKPDTRFDLRLKDV 321

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+    SEF++F+K     P  +   +P  G    R   D   E+ +  G  GLA+I  R
Sbjct: 322 TDAVRGSEFKLFAKA----PLVKAMRVPG-GETMTRKEIDEFTEFVKIYGAQGLAWIKIR 376

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E        P+AK L+     A+   L ++ GD  FF AG+P    +   + R  + Q
Sbjct: 377 EGE-----WQSPIAKFLSETERAALVAALGLEVGDIVFFQAGEPGMVNAALGNLRVKLGQ 431

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            LG+I  + + F W+ DFP +E++EEEK+    H+PFT P+ G   L  +D  + +A  Y
Sbjct: 432 HLGLIPEDTYNFLWVTDFPLFEYDEEEKRYVACHHPFTSPKDGHFDLMTSDPAAARARAY 491

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H +EV  + F+ +G+  +  E +FG L +A + G PPHGGIA G
Sbjct: 492 DMVLNGYELGGGSIRIHSAEVQRRMFAALGLDPQEAEEKFGFLIQALEHGAPPHGGIAFG 551

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G+ ++R+V  FP +Q    L+  +P  VS  QLR+LG+R+ E P++
Sbjct: 552 MDRLVMLLTGSPSIRDVIAFPKTQKATCLMTQAPDAVSARQLRDLGIRLRETPQE 606


>gi|78222569|ref|YP_384316.1| aspartyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|97196683|sp|Q39VY3|SYD_GEOMG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78193824|gb|ABB31591.1| aspartyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 594

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 356/591 (60%), Gaps = 12/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           R+H CG+L  +DVG  V L GW+ R R HGG+IF D+RD  G+ Q+V +P  ++     A
Sbjct: 10  RSHYCGNLTKADVGREVILMGWILRRRDHGGLIFADLRDREGLAQIVFDPAKNTDAHHKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++R+E+V+ + G V+ R   T+N+ + TG++E+   + +IL+ ++ LP  +    +  E
Sbjct: 70  EAIRNEYVVAVKGEVIPRPEGTVNSAMKTGEVEVLVTECKILNRSKALPFTLDDYVDVAE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR  L +N++ R+ +    R  +    F+E  TP LT S+PEGARDFLV
Sbjct: 130 NIRLKYRYLDLRRPVLQQNLILRSMVAQITRQYLSENGFLEIETPFLTKSTPEGARDFLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+NQG+FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 190 PSRINQGNFYALPQSPQIFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQIDCEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++DI++ ME ++  +F   + G  V     R+ Y +AIRR+G D PD+R  + +  +
Sbjct: 249 FIDREDIISVMEGLIAKIF-TVAKGVDVPLPMPRMTYAEAIRRFGVDNPDVRFGLELVEL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+    + F+VF+ + +   G  +  + AKG    +R   D + E+A+  G  GLAY+  
Sbjct: 308 TDIVKGAGFKVFADVAA--SGGIIKGLNAKGCARFSRKEIDDLTEFAKIYGAKGLAYV-- 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +++E        P+AK  +      +      +DGD   F+A  P          RNH+A
Sbjct: 364 KIEEG---QWHSPIAKFFSAEEIATMNQAFGAEDGDLLLFVADKPKVVNDSLGKLRNHLA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             LG+ + N F F WI DFP  EW+E+EK+    H+PFT P         +D  S +A  
Sbjct: 421 GILGLADKNTFRFVWITDFPLLEWDEDEKRWAAVHHPFTAPMDEDLEKVESDPGSCRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H   V    FS +G+S +    +FG L  A +CG PPHGGIA 
Sbjct: 481 YDLVLNGNEIGGGSIRIHQQHVQSLMFSMLGLSDDETRAKFGFLLDALECGTPPHGGIAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR++MLL G+ ++R+V  FP +Q    L+  +PS V  +QLREL L++ 
Sbjct: 541 GMDRLIMLLTGSDSIRDVIAFPKTQKGACLMSEAPSPVDAKQLRELALKVT 591


>gi|284050133|ref|ZP_06380343.1| aspartyl-tRNA synthetase [Arthrospira platensis str. Paraca]
 gi|291569798|dbj|BAI92070.1| aspartyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 597

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/607 (42%), Positives = 359/607 (59%), Gaps = 27/607 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ CG L   ++G  V L GWV R R HGG++FLD+RD  G+ Q++++P+     + ++
Sbjct: 2   RTYYCGHLRSVNIGETVTLCGWVDRYRDHGGVVFLDLRDRSGLVQIISDPERTPNSYGLS 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGE--RE 119
            SVR+E+VL I G V  R  E+IN  I  G IE+ A +IE+L+ + + LP  V       
Sbjct: 62  TSVRNEYVLRITGRVSHRPDESINPKIPGGDIEVYADEIEVLNGLGKPLPFQVGSNDNES 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGA 177
             E +R KYR+LDLRR+ + +N+  R  +I +MR R +   E+FIE  TPILT S+PEGA
Sbjct: 122 VREELRLKYRYLDLRRERMTRNLQLRHEVIKAMR-RFLEDQEHFIEVETPILTRSTPEGA 180

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRVN G ++ALPQ+PQ +KQ+LM SGFDRY+QIA CFRDED R+DR P EF QL
Sbjct: 181 RDYLVPSRVNPGEWFALPQSPQLFKQMLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQL 239

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF+ Q++IL   EN++  +F+    G  +   F R+ Y DA+ RYG+DKPD R  +
Sbjct: 240 DMEMSFMSQEEILTLNENLVCHIFKTV-KGIDLPRPFPRMTYKDAMERYGSDKPDTRFGL 298

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARS 350
            + +V++    S F+VFS  +      ++  IP    GGN    +        + + A  
Sbjct: 299 ELADVSDLLKDSGFKVFSAAIKSGGIVKILPIP----GGNDLISNVQIKPGGDLFKEATE 354

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
            G  GLAYI  R+   G +  +G +  +L+      I  R + + GD   F AGD     
Sbjct: 355 AGAKGLAYI--RVKADGQIDTIGAIKDNLSDEQKAEILRRTNAKAGDLLLFGAGDVATVN 412

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                 R  I Q LG+I+       W+ DFP +EWN++EK+++  H+PFT P        
Sbjct: 413 KTLDRLRLVIGQRLGLIDPEQINLLWVTDFPMFEWNQDEKRLEAIHHPFTSPHPD----D 468

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            NDL + +A  YDLV NG EI  G +R +  E+  + F  +G+S E   N+FG L  AF+
Sbjct: 469 INDLKTARAQAYDLVLNGTEIGGGSLRIYQREIQEKVFDAIGLSTEEAYNKFGFLLEAFE 528

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR+VMLL G  ++R+V  FP +Q    LL  +PS V  +QL+EL + 
Sbjct: 529 YGTPPHGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQARCLLTNAPSGVDQKQLKELQVA 588

Query: 591 IVENPKK 597
               PKK
Sbjct: 589 STYKPKK 595


>gi|282850505|ref|ZP_06259884.1| aspartate--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579998|gb|EFB85402.1| aspartate--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 601

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/593 (39%), Positives = 360/593 (60%), Gaps = 17/593 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
           +RTH CG +   +VG  V L GWV R R HGG+IFLD+RD  G+ QVVA+PD     F  
Sbjct: 8   HRTHGCGTISEQEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGVVQVVASPDHNVESFHK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VLC+ G +  R    IN N+ TG  E+  +++ +L+ A+  P  +  + +  
Sbjct: 68  AEDVRNEYVLCVRGKITKRDEAAINPNLPTGAYEMFCEELRVLNSAKTPPFYIQDDIDVD 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + +N++ R ++  +MR    + +F+E  TP+LT S+PEGARD+L
Sbjct: 128 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 188 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDLEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++DI   +E ++  +F+  + G  +S    RI +D+A+ +YG+DKPDLR  +   +
Sbjct: 247 SFVDEEDIYALLEEMIAHIFKT-ALGKEISLPMPRITWDEAMDKYGSDKPDLRFDMAFTD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VT+    +EF+VF  ++      +   +P   G   R   D + E+    G  GLA+  +
Sbjct: 306 VTDLVKDTEFKVFRSVIDNGGVVKGIVVPGDAGIPRREL-DDLVEYVNRYGAKGLAWACF 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             +E G++     + K L       I  ++  + GD    IA  P        + R  +A
Sbjct: 365 --NEDGSIKSQ--IMKFLGEDTIRNIGEKMGAKGGDLVLMIADKPATVARALGELRLEMA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESLKGNDLLSI 477
           + + +I+ +   F W+ DFP +E+NE+EK+    H+PFTMP+      +ES  GN    +
Sbjct: 421 RRMNMIDQDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHADLDKLESDPGN----V 476

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA  YD+V NG EI  G +R + ++V  + F  +G+S E   ++FG +  AFQ G PPH 
Sbjct: 477 KAIAYDMVLNGVEIGGGSLRIYQADVQEKVFKAIGLSIEEARSKFGFMLDAFQYGAPPHA 536

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G A G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QL+EL ++
Sbjct: 537 GCAFGLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIK 589


>gi|292669402|ref|ZP_06602828.1| aspartate-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648963|gb|EFF66935.1| aspartate-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 602

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/597 (40%), Positives = 356/597 (59%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH CG L    V   V L GWV R R HGG+IF+D+RD  G+ Q+V   A      F  
Sbjct: 9   RTHDCGTLRKEQVSEEVTLCGWVSRRRDHGGLIFVDMRDRSGLVQIVFDEAAMAEGTFHE 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++RSE+V+C+ G+V +RSA+T+N N+ TG +E+   ++ IL+ A+  P  +    +  
Sbjct: 69  AETLRSEFVICVRGMVRARSADTVNPNMATGDVEIVVNELRILNKAKTPPFYIQDGIDVD 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR +YR+LDLRR  +  N++ R R+   MR       F+E  TP+L  S+PEGARDFL
Sbjct: 129 EMIRLRYRYLDLRRPEMQANMILRHRVTKIMRDFFDRSGFLEIETPMLCKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM SGF++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 189 VPSRLNAGEFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQP-EFTQLDIEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++QD IL  ME +++ +FE+ S G  +   F R+ +D+A+ R+G+DKPDLR  + + +
Sbjct: 248 SFMDQDSILTLMEEMVKELFEK-SIGAKIETPFRRMAWDEAMERFGSDKPDLRFGMELQD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +T++   SEF+VF+ +L    G  V  I  +G     R   D +  + ++ G  GLA+I 
Sbjct: 307 ITDYVGGSEFKVFNSVLEA--GGRVKVINVEGYANIPRRELDGLVSYVQNYGAKGLAWIQ 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E G  +   P  K  +    E I+  +  + GD    +A  P        + R  +
Sbjct: 365 Y--SEEGVKS---PFKKFYSDETFETIKNAVGAKTGDLLLVVADQPAVVAQALGELRLEM 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +   +I+ N   F W++DFP +E++ EEK+    H+PFT P+     L   D   +KA 
Sbjct: 420 GRRRNLIDPNALSFLWVVDFPMFEYSAEEKRFKAMHHPFTAPRDEDIPLLATDPGRVKAN 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R + S++  Q F  +G + E    RFG +  AF+ G PPHGG+A
Sbjct: 480 AYDMVLNGVEIGGGSLRIYRSDLQEQVFETLGFTPEEARERFGFMMNAFEYGTPPHGGLA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QLREL +R     KK
Sbjct: 540 FGLDRLVMLMAKRRSIRDVIPFPKTQSASDVMCEAPSPVDEKQLRELYIRTAVPKKK 596


>gi|323704146|ref|ZP_08115725.1| aspartyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323536212|gb|EGB25984.1| aspartyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 593

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/597 (41%), Positives = 358/597 (59%), Gaps = 25/597 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L ++DVG  V + GWV R R  GG+IFL++RD  G+ Q+V +       F+ A
Sbjct: 10  RTHMCGELTINDVGKNVVVMGWVQRRRDLGGLIFLELRDRTGLIQIVFSEQLSKEAFDKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+VL   G V+ RS E +N N+ TG IE+   + +ILS AE  P  V       E
Sbjct: 70  QHVRNEYVLAASGKVVKRSEENVNPNLETGNIEIYVSEFKILSKAETPPFMVEDRNNVSE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR ++ K ++ R +I   +R  +    FI+  TP+L  S+PEGARD+LV
Sbjct: 130 AIRLKYRYLDLRRPSMQKILITRYKITRIVRDFLDKNGFIDIETPLLIKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G F+ALPQ+PQ +KQLLM SGFDRY+QIA C RDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRVQPGKFFALPQSPQIFKQLLMISGFDRYYQIAKCLRDEDLRADRQP-EFTQIDIEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++DD+++  E ++  +F+E  N + +   F RI + +A+ R+G+DKPDLR  + + N+
Sbjct: 249 FVDEDDVISINERMIAKIFKEILNID-LEVPFRRISWQEAMDRFGSDKPDLRFGMELKNL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           +  F  SEF+VF    ++  G  V AI  KG     R   D + E+ ++    GL +I  
Sbjct: 308 SSIFADSEFKVFRD--AIENGGSVRAINVKGAASIPRRQLDELVEYVKTYKAKGLVWI-- 363

Query: 362 RLDESGNVAGMGP---VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                  ++  GP   ++K L       +   ++ + GD    +A    +      DA  
Sbjct: 364 ------QMSDDGPKSQISKFLKEDELAQVLNAMEAEKGDLILIVAD---RNNMIVYDALG 414

Query: 419 HIAQELG----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           H+  E+G    +I+ N +EF W++DFP  E++EEEK+    H+PFT P+     +   + 
Sbjct: 415 HLRLEMGRRYNLIDENKYEFLWVVDFPLLEYSEEEKRYVAMHHPFTAPKDEDIEMLDKNP 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YD+V NG EI  G IR H +E+  + F  +G + E  E RFG L  AF+ G P
Sbjct: 475 GQVRAKAYDIVLNGMEIGGGSIRIHDTELQKKMFKVLGFNDEDAEARFGFLLNAFKYGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PHGGIA G+DR+ M+L G  N+R+V  FP +QN CDL+  +PS VS EQL EL +++
Sbjct: 535 PHGGIAYGLDRLTMILTGTDNIRDVIAFPKTQNACDLMSDAPSEVSKEQLDELHIKV 591


>gi|85859320|ref|YP_461522.1| aspartyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|97196498|sp|Q2LTE0|SYD2_SYNAS RecName: Full=Aspartyl-tRNA synthetase 2; AltName:
           Full=Aspartate--tRNA ligase 2; Short=AspRS 2
 gi|85722411|gb|ABC77354.1| aspartyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 591

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/592 (41%), Positives = 347/592 (58%), Gaps = 10/592 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
           + RTH CG L  SD G  V L GWVHR R HGG+IF+D RD  G+ Q+V NP+ +    +
Sbjct: 8   KKRTHYCGQLDSSDSGKEVILMGWVHRRRDHGGVIFVDFRDREGLVQIVFNPEYSPVAHQ 67

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+VL + G V +R    +N ++ TG IE+  +++EIL+ ++  P  +  E + 
Sbjct: 68  EAHKIRSEYVLAVRGAVRNRPEGMVNPDMKTGAIEVMVEELEILNESQTPPFSLESESDI 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  + +NI+ R R+    R    +  FIE  TP LT S+PEGARD+
Sbjct: 128 SENIRLKYRYLDLRRPQIQRNIMLRNRVAAETRQFFQSNGFIEIETPFLTKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N+G+FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D+E
Sbjct: 188 LVPSRINKGTFYALPQSPQIFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDVE 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+ +DDI+  ME ++  +F    N  T S  F R+ Y +AI RYG D PD+R  + + 
Sbjct: 247 MSFITEDDIIEIMEGLMTHLFSRCLN-RTFSTPFPRLSYAEAIGRYGKDNPDIRFGLELR 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+    S   VF +  +     +   IP +G   +R   D +  +    G  GLA+  
Sbjct: 306 DLTDILADSGLTVFREAAAGGGMIKAIRIP-EGKRLSRKDLDDLQNFVSIYGARGLAWAR 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D         P+ K L       I  R++  +GD   F+A  P        + R H+
Sbjct: 365 VLAD-----GWTSPIFKFLTADEVRQINGRMEAVEGDVLVFVADTPTVVNDSLGNLRIHL 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +I+   F F WI +FP  E+++ EK+    H+PFT P          +   ++A 
Sbjct: 420 AKKLNLIDPEQFAFVWITEFPLMEFSDTEKRYVSTHHPFTSPVPDDVKYLPGEPGKVRAR 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H  E+    F  +G+  E V ++FG L  A + G PPHGGIA
Sbjct: 480 AYDLVLNGSEVGGGSIRIHRKEIQSLIFEALGLENEEVRSKFGFLLDALEFGTPPHGGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VM++ GA+++R+V  FP +Q    L+  +PS VS+EQL EL L+IV
Sbjct: 540 FGLDRLVMMMTGAESIRDVIAFPKTQKATCLMTDAPSRVSIEQLMELSLKIV 591


>gi|304437074|ref|ZP_07397037.1| aspartate--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304370025|gb|EFM23687.1| aspartate--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 602

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/597 (40%), Positives = 357/597 (59%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH CG L    VG  V L GWV R R HGG+IF+D+RD  G  Q+V   A      F  
Sbjct: 9   RTHGCGILRKEQVGEEVTLCGWVSRRRDHGGLIFVDMRDRSGFVQIVFDEAAMAEGTFHE 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++RSE+VLC+ G V +RSAET+N N+ TG+IE+   ++ IL+ A+  P  +    +  
Sbjct: 69  AETLRSEFVLCVRGTVRARSAETVNPNMATGEIEIVVSELRILNKAKTPPFYIQDGVDVD 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR +YR+LDLRR  +  N++ R R+   MR       F+E  TP+L  S+PEGARDFL
Sbjct: 129 EMIRLRYRYLDLRRPEMQANMILRHRVTKIMRDFFDRSGFLEIETPMLCKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM SGF++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 189 VPSRLNPGEFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQP-EFTQLDIEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++QD IL  ME +++ +FE+ S G  +   F R+ +D+A+ R+G+DKPDLR  + + +
Sbjct: 248 SFMDQDSILTLMEGMVKELFEK-SIGAKIETPFQRMSWDEAMDRFGSDKPDLRFGMELQD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +T++   S+F+VF+ ++    G  V  I  +G     R   D +  + +     GLA+I 
Sbjct: 307 ITDYVGGSDFKVFNAVMEA--GGRVKVINVEGYANIPRRELDGLVSYVQGYSAKGLAWIQ 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E G  +   P  K  +    E I+  +  + GD    +A  PL       + R  +
Sbjct: 365 Y--TEEGVKS---PFKKFYSDETFETIKNAVGAKTGDLLLVVADQPLVVAQALGELRLEM 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +  G+I+ +   F W++DFP +E++ EEK+    H+PFT P+        +D   +KA 
Sbjct: 420 GRRRGLIDPDALRFLWVVDFPMFEYSAEEKRYKAMHHPFTAPRDEDVPFLKSDPGRVKAN 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R + S++  Q F  +G + E    RFG +  AF+ G PPHGG+A
Sbjct: 480 AYDMVLNGVEIGGGSLRIYSSDLQEQVFEALGFTPEEARARFGFMMNAFEYGTPPHGGLA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML+   +++R+V  FP +Q+  D++  +P+TV  +QLREL +R     KK
Sbjct: 540 FGLDRLVMLMAKRRSIRDVIAFPKTQSASDVMSEAPATVDEKQLRELYIRTAVPKKK 596


>gi|309388966|gb|ADO76846.1| aspartyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 591

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/592 (41%), Positives = 364/592 (61%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG++   ++   V + GWV + R HGG+IF DIRD  GI QVV NP+   + F  A
Sbjct: 10  RTHLCGEVSEKEIKKQVTIMGWVQKRRDHGGVIFTDIRDRSGIVQVVFNPEIGESLFAKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++RSE+V+ I G V SR    +N ++ TG+IE+ A ++ IL  A+  P+ +    +  E
Sbjct: 70  DTLRSEYVIAITGEVRSRPEGNVNLDLPTGKIEIKAIELRILDKAKTPPIQIEDNIDTGE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + K I  R ++  + R  +    F E  TPILT SSPEGARD+LV
Sbjct: 130 DIRLKYRYLDLRRPKMKKIIGLRHQVTKTTRDYLDQNGFWEIETPILTKSSPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G F+ALPQ+PQ +KQLLM SG +RYFQIA CFRDED R++R P EF Q+DMEMS
Sbjct: 190 PSRVNPGEFFALPQSPQIFKQLLMVSGMERYFQIARCFRDEDLRANRQP-EFTQIDMEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGN-TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           FV+Q++++   E +++   E FS G   V N   R+ Y++AI R+G+DKPDLR  + + +
Sbjct: 249 FVKQEEVMEITEGLMK---ELFSIGEIEVPNKIERMTYEEAINRFGSDKPDLRFGMELKD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360
           ++E    S+F +FS   +V  G +V  I  KGG  + R+  D   E+ +     GLA+I 
Sbjct: 306 LSELVKDSDFNIFSG--TVAKGGQVKGINFKGGADSPRSTIDGFEEYVKMFKAKGLAWIA 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNH 419
            R  E+G  +   P+AK L+    EAI+ +L+ Q GD    I  D   F + A  + R  
Sbjct: 364 LR--ENGLKS---PIAKFLSEAEIEAIKSKLEAQKGD-LLLIVADQASFVAAALGNLRLK 417

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+E G+I    ++F WI+DFP +E++E E ++   H+PFT P     +   +D  S+++
Sbjct: 418 IAKENGLIPAEVYKFVWIIDFPLFEYDENEDRLTAIHHPFTAPNEEDVNKLDSDPTSVRS 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG E+  G IR + +++  + FS + IS++  E++FG L  AF  G PPHGGI
Sbjct: 478 KAYDLVLNGEELGGGSIRINNNKLQEKVFSALNISQKEQEDKFGYLLEAFDYGTPPHGGI 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR++M++    ++R+V  FP +Q     L  +P+ V  +QL+ELG+ +
Sbjct: 538 AFGLDRLMMIISRTSSIRDVIAFPKTQKATSPLTNAPAKVDKKQLKELGISL 589


>gi|303230759|ref|ZP_07317506.1| aspartate--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514519|gb|EFL56514.1| aspartate--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 600

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 233/589 (39%), Positives = 359/589 (60%), Gaps = 9/589 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
           +RTH CG +  ++VG  V L GWV R R HGG+IFLD+RD  GI QVVA+PD     F  
Sbjct: 8   HRTHGCGTISEAEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGIVQVVASPDHNVESFHK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VLC+ G +  R  E IN N+ TG  E+  +++ +L+ A+  P  +    +  
Sbjct: 68  AEDVRNEYVLCVRGKITKRDEEAINPNLPTGAYEMYCEELRVLNSAKTPPFYIQDNIDVD 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + +N++ R ++  +MR    + +F+E  TP+LT S+PEGARD+L
Sbjct: 128 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 188 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDLEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++DI   +E ++  VF++ + G  +     RI +D+A+ +YG+DKPDLR  +   +
Sbjct: 247 SFVDEEDIYALLEQMVAEVFKK-TLGKEIPLPMPRITWDEAMDKYGSDKPDLRFDMAFTD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VTE    +EF+VF  ++      +   +P   G   R   D +  +    G  GLA+  +
Sbjct: 306 VTELVKDTEFKVFRSVIDNGGIVKGIVVPGDAGIPRREL-DDLVAYVNRYGAKGLAWACF 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             +E G++     + K L       I  ++  + GD    IA           + R  +A
Sbjct: 365 --NEDGSIKSQ--IMKFLGEDTIRNIGEKMGAKGGDLVLMIADKTATVARALGELRLEMA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + + +I+ +   F W+ DFP +E+NE+EK+    H+PFTMP+        +D  S+KA  
Sbjct: 421 RRMNMIDEDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHEDLDKLQSDPGSVKAIA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R + S+V  + F  +G+S+E  +++FG +  AF+ G PPH G A 
Sbjct: 481 YDMVLNGVEIGGGSLRIYQSDVQEKVFKAIGLSEEEAKSKFGFMLDAFKYGAPPHAGCAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QL+EL ++
Sbjct: 541 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIK 589


>gi|229062097|ref|ZP_04199422.1| Aspartyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717249|gb|EEL68924.1| Aspartyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 591

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/583 (40%), Positives = 353/583 (60%), Gaps = 13/583 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQASKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPAMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL  ME ++  V ++ + G  VS  F R+ Y DA+ R+G+DKPD R  + + ++
Sbjct: 243 FLTQDEILEMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARFGSDKPDTRFEMELKDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E  V   F+VF+   +V  G +V AI AKG     +R   D + E+A+  G  GLA++ 
Sbjct: 302 SEFAVGCGFKVFTS--AVENGGQVKAINAKGAASKYSRKDIDALTEFAKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDANVLMSTLEADAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  Q
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQ 577


>gi|159026019|emb|CAO86273.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 595

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/604 (41%), Positives = 361/604 (59%), Gaps = 25/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CGDL   ++   V L GWV R R HGG+IF+D+RD  GI Q+V++P    A + IA
Sbjct: 2   RTHYCGDLSAIEIEKSVTLFGWVDRRRDHGGVIFIDLRDRSGIVQIVSDPQRTPASYPIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYP 121
           ++VR+E+VL + G V  R  E++N  I TG+IE+ A  IEIL+ V ++LP  V       
Sbjct: 62  ETVRNEYVLKVTGTVSQRPPESLNPRIATGEIEIYATSIEILNGVTKQLPFVVSSSESES 121

Query: 122 E--SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGAR 178
               +R +YR+LDLRR+ + +N+  R +++  MR  +  E +FIE  TPILT S+PEGAR
Sbjct: 122 VREDVRLRYRYLDLRRERMSQNLQLRHQVVKEMRRFLEDEQHFIEVETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGQWYALPQSPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+   +IL   E ++  +F++  N + +S    R+ Y +A+ RYG D+PD R  + 
Sbjct: 241 MEMSFLSLSEILALNEALIAHIFKKVKNID-ISLPLPRLTYAEAMDRYGVDRPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARSQ 351
           + NV E F  S F+VFS  ++     +V  IP     GN A  +        + + A   
Sbjct: 300 LVNVAEIFADSGFKVFSGAIASGGTVKVLPIP----NGNEAISNVRIKPGGDLFKEATDA 355

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  G+AYI  R+ E  +   +G +  +L     +A+  +   + G    F AGD      
Sbjct: 356 GAKGIAYI--RVREDYDFDTIGAIKDNLTEAQKQALIEKTGAKPGHLLLFGAGDTDTVNK 413

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
             +  R  + ++LG+I+       W+ DFP +E+N EEK+++  H+PFT P    E L  
Sbjct: 414 SLSRLRLVLGEQLGLIDPEKINLLWVTDFPMFEYNAEEKRLEALHHPFTAPNP--EDL-- 469

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +DL   +A  YD++ NG EI  G +R +  EV  + F+ +G+S E   N+FG L  AF+ 
Sbjct: 470 DDLAHARALAYDMIFNGIEIGGGSLRIYQREVQEKVFATIGLSPEEAYNKFGFLLEAFEY 529

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +PSTV+ +QL+EL +  
Sbjct: 530 GTPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQASCLLTSAPSTVAAKQLKELSVAS 589

Query: 592 VENP 595
              P
Sbjct: 590 TYKP 593


>gi|268317897|ref|YP_003291616.1| aspartyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262335431|gb|ACY49228.1| aspartyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 619

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/608 (41%), Positives = 357/608 (58%), Gaps = 26/608 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           +H  RTH+CG+L  + VG  V L GWV   R  GG+IF+D+RD YG+TQ+V +P  +   
Sbjct: 13  LHGPRTHTCGELRRAHVGQEVVLKGWVDTRRDLGGVIFIDLRDRYGLTQIVFSPQDNETA 72

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           + +A  +RSE+V+ + G+V  RS ET+N  + TG++E+ A  + IL+ +E LP PV    
Sbjct: 73  YRLADRLRSEYVISVRGVVRERSPETVNPKLATGEVEVRAHDLIILNTSEPLPFPVSAHE 132

Query: 119 E----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
           E      E +R KYR+LDLRR  L +N++ R ++    R    A  F+E  TP+LT S+P
Sbjct: 133 EKRTTTSEELRLKYRYLDLRRPELQRNLLLRHQVYLITRRYFDAHQFVEVETPVLTKSTP 192

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EGARDFLVPSR++ G FYALPQ+PQ YKQ+LM +G DRYFQI  CFRDED R+DR P EF
Sbjct: 193 EGARDFLVPSRLHPGKFYALPQSPQLYKQILMVAGLDRYFQIVKCFRDEDLRADRQP-EF 251

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            Q+D+EM+F  ++ I   +E +++ ++ E + G  +   F R+ YD+A+RR+G+DKPD R
Sbjct: 252 TQIDVEMTFPTEEQIFELIEGLIQAIWRE-TLGVELPRPFPRMSYDEALRRFGSDKPDTR 310

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN-EWARSQ-G 352
             + +  + E F  S FRVF  +L          +P  G  G R + DR++ +  R Q G
Sbjct: 311 FGLELQEIGEVFRGSGFRVFESVLEQGGEIVALVVPGMGDQG-RGYMDRLDKDVVRKQIG 369

Query: 353 QPGLAYIFWRLDESGNVAGMGP----VAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407
             GL Y  ++L   G     GP    V +H L     +    +L  + GD    +AG   
Sbjct: 370 AGGLVY--FKLPSDG-----GPIYSSVKEHVLPSAYVQRAVAKLGARAGDLVLLLAGPRP 422

Query: 408 KFCSFAADARNHIAQELGII---NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
           +    A   R H+A+EL ++       + F W+ DFP  EW+EE  +    H+PFT P  
Sbjct: 423 QVYLQAGALRLHMARELNLVPPAGQAPWHFLWVTDFPLLEWDEEAGRYFAMHHPFTSPHP 482

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
               L   +   ++A  YDLV NG EI  G IR H  ++  + F  +GI +E  E RFG 
Sbjct: 483 DDLDLLETEPGRVRARAYDLVLNGNEIGGGSIRIHRQDIQRRMFRVLGIDEEEAERRFGF 542

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPHGGIA G+DRIVMLL GA ++R+V  FP +Q   +L+  +P  VS EQL
Sbjct: 543 LLTAFRYGAPPHGGIALGLDRIVMLLAGAGSLRDVIAFPKTQRGQELMSNAPDEVSPEQL 602

Query: 585 RELGLRIV 592
            EL +R+V
Sbjct: 603 EELHIRVV 610


>gi|78355059|ref|YP_386508.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|97196665|sp|Q317R3|SYD_DESDG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78217464|gb|ABB36813.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 606

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/593 (41%), Positives = 352/593 (59%), Gaps = 16/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT++CG+L  + +GS V L GWV   R HGG+IF+D+RD  G+TQVV +PD +    E A
Sbjct: 24  RTNTCGELNANAIGSEVCLMGWVQFRRDHGGLIFIDLRDRSGLTQVVFSPDVSVDAHERA 83

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+VL + G V  R    +N N+ TG++E+   + ++L+ ++  P  V    E  E
Sbjct: 84  HVLRSEYVLAVRGTVRPRPEGMVNPNMKTGEVEVYVSEWKLLNTSKTPPFQVEDRVEASE 143

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YR+LDLRR  L +N   R R   ++R  +   NF+E  TP LT S+PEGARDFLV
Sbjct: 144 NLRLEYRYLDLRRPRLARNFQLRHRATQAIRNYLDQLNFLEVETPYLTKSTPEGARDFLV 203

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+NQG FYALPQ+PQ +KQLLM +G DRY+QI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 204 PSRMNQGEFYALPQSPQIFKQLLMVAGMDRYYQIVRCFRDEDLRADRQP-EFTQVDIEMS 262

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ + +  E ++  VF+E + G  V+  F R+ YD AI  YG DKPD R  + + +V
Sbjct: 263 FVDEERVQSMAEGLMARVFKE-TLGIDVALPFPRMPYDQAIAEYGLDKPDTRFDLRLKDV 321

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+    S FR+F+K   V       A+   GG   +R   D   E+ +  G  GLA+I  
Sbjct: 322 TDILRGSGFRLFAKAELVK------AMRVPGGAVLSRKEIDDFTEFVKVYGAQGLAWIKI 375

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE        P+AK L+     A+   L ++ GD  FF A  P    +     R  +A
Sbjct: 376 KEDE-----WQSPIAKFLSDDERAALTTELGLETGDIVFFQAASPDVVNNSLGYLRLKVA 430

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
              G+I  N + F W+ DFP +E++ E+K+    H+PFT PQ G E L  +D    +A  
Sbjct: 431 DRFGLIPENSYNFLWVTDFPLFEYSPEDKRYVACHHPFTAPQVGHEELMVSDPAKARARA 490

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR H  E     F  +G   +  E +FG L +A + G PPHGGIA 
Sbjct: 491 YDLVLNGNEVGGGSIRIHSREAQEHMFRALGFDPQEAEEQFGFLMQALELGAPPHGGIAF 550

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR+VMLL G+ ++R+V  FP +Q    L+  +P  V+ +QLRELG+R+ E 
Sbjct: 551 GMDRLVMLLAGSASIRDVIAFPKTQKATCLMTHAPDQVAAKQLRELGIRLREK 603


>gi|220906397|ref|YP_002481708.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254781729|sp|B8HXQ8|SYD_CYAP4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219863008|gb|ACL43347.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 597

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/605 (40%), Positives = 366/605 (60%), Gaps = 25/605 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CGD+   DVG+ V L GWV R R HGG+IFLD+RD  G+ Q+V++P+     +  A
Sbjct: 2   RTHYCGDVRSHDVGTTVTLFGWVDRRRDHGGVIFLDLRDRSGVVQIVSDPERTPNSYAKA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYP 121
           + +R+E+V+ + G V +R  E++N  + TG++E+ A +IE+L +V ++LP  V       
Sbjct: 62  EQLRNEYVVKVTGRVSARPEESLNPRLPTGEVEIYADQIELLNAVRKQLPFQVSTTESES 121

Query: 122 --ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRR+T+  N+  R +++ +MR  +  E NF+E  TP+LT S+PEGAR
Sbjct: 122 VREDLRLKYRYLDLRRETMAANLQLRHQVVKAMRRYLEDEQNFVEIETPVLTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G ++ALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGEWFALPQSPQLFKQLLMVAGYDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ Q++IL   E ++  +F++   G  +   F R+ Y +A+ RYG+DKPD R  + 
Sbjct: 241 MEMSFMSQEEILELNEALVCHIFKQV-KGIELPRPFPRLTYAEAMDRYGSDKPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARSQ 351
           + NV++    S F+VFS  ++     +V  IP     GN    +        + + A   
Sbjct: 300 LVNVSDLMKDSGFKVFSGAVASGGLVKVLPIP----NGNDLISNVRIKPGGDLFKEATDA 355

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLAYI  R+ E G +  +G +  +L       +  R   + G    F AG       
Sbjct: 356 GAKGLAYI--RVREGGEIDTIGAIKDNLTEAQKAELLQRTGAKPGHLLLFGAGTAAIVNK 413

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
                R  + +EL +I+       WI++FP +EWN +EK+++  H+PFT P    E ++ 
Sbjct: 414 TLDRLRQVLGRELNLIDPAKINLLWIVEFPMFEWNADEKRLEALHHPFTAPYP--EDVQ- 470

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            DL + +A  YDLV NGFE+  G +R + +E+  Q F  +G+S E  +N+FG L  AF+ 
Sbjct: 471 -DLKTAQAQAYDLVYNGFEVGGGSLRIYQTELQKQVFETIGLSPEEAQNKFGFLLEAFEY 529

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +P+ V + QL+EL +  
Sbjct: 530 GTPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQARCLLTSAPAEVDLRQLKELHVAS 589

Query: 592 VENPK 596
              PK
Sbjct: 590 TSQPK 594


>gi|228923154|ref|ZP_04086445.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228836533|gb|EEM81883.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 593

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/583 (40%), Positives = 353/583 (60%), Gaps = 13/583 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTHSCG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHSCGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQAIKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK  +  +   +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFSEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  Q
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQ 577


>gi|218887128|ref|YP_002436449.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758082|gb|ACL08981.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 614

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/595 (40%), Positives = 350/595 (58%), Gaps = 16/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H C  L  +D G+ V L GWV   R HGG+IF+D+RD  G+TQ+V +PD   A  E A
Sbjct: 24  RSHDCATLTAADTGAEVCLMGWVQYRRDHGGLIFVDLRDRQGLTQIVFSPDVNPAAHERA 83

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+VL I G V  R     N  + TG+IE+   + ++L+ ++     +    E  E
Sbjct: 84  HIIRSEYVLAIRGTVRPRPEGMTNPGMKTGEIEVYVSEWKLLNTSKTPAFVIEDRTEASE 143

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YR+LDLRR  +  N + R +   + R  +    F+E  TP LT S+PEGARDFLV
Sbjct: 144 NLRLQYRYLDLRRPRMANNFIVRHKAAQATRRYLDELGFLEIETPYLTKSTPEGARDFLV 203

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+NQG FYALPQ+PQ +KQLLM SG +RY+QI  CFRDED R+DR   EF Q+D+EMS
Sbjct: 204 PSRLNQGQFYALPQSPQLFKQLLMMSGMERYYQIVRCFRDEDMRADRQL-EFTQIDIEMS 262

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ ++   E ++  VF +  +   ++  F R+ YDDA+ RYG DKPD R  + + +V
Sbjct: 263 FVDEEQVMAMAEGLMARVFRDALD-REIATPFPRMSYDDAMARYGVDKPDTRFGLELQDV 321

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T     S F++F+    V       A+   GG    R   D   E+ +  G  GLA+I  
Sbjct: 322 THIVRGSNFKLFATAELVK------AMRVPGGETMTRKEIDEFTEFVKIYGAQGLAWIKI 375

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R DE        P+AK L+      ++  L ++ GD  FF AG P    +   + R  + 
Sbjct: 376 RPDE-----WQSPIAKFLSDEERAGLKDALGLETGDIVFFQAGAPGMVNAALGNLRVRLG 430

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG+I+ N F F W+ DFP +E++EEEK+    H+PFT P+ G   +   +  + +A  
Sbjct: 431 EHLGLIDENAFNFLWVTDFPLFEYDEEEKRYVACHHPFTSPKDGHMDVMVENPAAARARA 490

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IRNH +E   + F+ +G S E  E +FG L +A + G PPHGGIA 
Sbjct: 491 YDMVLNGYELGGGSIRNHTAEKQRRMFAALGFSPEEAEAQFGFLTQALEMGAPPHGGIAF 550

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+ MLL G+ ++R+V  FP +Q    LL  +P +VS  QLR+LGLR+ E  K
Sbjct: 551 GMDRLAMLLTGSSSIRDVIAFPKTQKATCLLTQAPDSVSARQLRDLGLRLRETGK 605


>gi|163942152|ref|YP_001647036.1| aspartyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229013620|ref|ZP_04170751.1| Aspartyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229135226|ref|ZP_04264025.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|229169145|ref|ZP_04296860.1| Aspartyl-tRNA synthetase [Bacillus cereus AH621]
 gi|229470553|sp|A9VIM8|SYD_BACWK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|163864349|gb|ABY45408.1| aspartyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228614373|gb|EEK71483.1| Aspartyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228648268|gb|EEL04304.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228747679|gb|EEL97551.1| Aspartyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 591

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/583 (40%), Positives = 352/583 (60%), Gaps = 13/583 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQASKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPAMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL  ME ++  V ++ + G  VS  F R+ Y DA+ R+G+DKPD R  + + ++
Sbjct: 243 FLTQDEILEMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARFGSDKPDTRFEMELKDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E  V   F+VF+   +V  G +V AI AKG     +R   D + E+A+  G  GLA++ 
Sbjct: 302 SEFAVGCGFKVFTS--AVENGGQVKAINAKGAASKYSRKDIDALTEFAKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK         +   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEEANVLMSTLEADAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  Q
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQ 577


>gi|229019624|ref|ZP_04176436.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229025864|ref|ZP_04182260.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735416|gb|EEL86015.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228741672|gb|EEL91860.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 591

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/583 (40%), Positives = 353/583 (60%), Gaps = 13/583 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+++    E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIISDDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL  ME ++  V ++ + G  VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILEMMERMMTKVMKD-AKGVEVSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF+   +V  G +V AI AKG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SEFAAGCGFKVFTS--AVENGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     + +A+   L+   GD   F+A             R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFGEEDAKALMNTLEATAGDLLLFVADKKSVVADSLGALRLRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A 
Sbjct: 415 GKELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            G+DR+VMLL G  N+R+   FP + +   LL  +PS V+  Q
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQ 577


>gi|166366468|ref|YP_001658741.1| aspartyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189082104|sp|B0JNW9|SYD_MICAN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166088841|dbj|BAG03549.1| aspartyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 595

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/604 (41%), Positives = 361/604 (59%), Gaps = 25/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CGDL   ++   V L GWV R R HGG+IF+D+RD  GI Q+V++P    A + IA
Sbjct: 2   RTHYCGDLSAIEIEKSVTLFGWVDRRRDHGGVIFIDLRDRSGIVQIVSDPQRTPASYPIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYP 121
           ++VR+E+VL + G V  R  E++N  I TG+IE+ A  IEIL+ V ++LP  V       
Sbjct: 62  ETVRNEYVLKVTGTVSQRPTESLNPRIATGEIEIYATSIEILNGVTKQLPFVVSSSESES 121

Query: 122 E--SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGAR 178
               +R +YR+LDLRR+ + +N+  R +++  MR  +  E +FIE  TPILT S+PEGAR
Sbjct: 122 VREDVRLRYRYLDLRRERMSQNLQLRHQVVKEMRRFLEDEQHFIEVETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGQWYALPQSPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+   +IL   E ++  +F++  N + +S    R+ Y +A+ RYG D+PD R  + 
Sbjct: 241 MEMSFLSLPEILALNEALIAHIFKKVKNID-ISLPLPRLTYAEAMDRYGIDRPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARSQ 351
           + NV E F  S F+VFS  ++     +V  IP     GN A  +        + + A   
Sbjct: 300 LVNVAEIFADSGFKVFSGAIASGGTVKVLPIP----NGNEAISNVRIKPGGDLFKEATDA 355

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  G+AYI  R+ E  +   +G +  +L     +A+  +   + G    F AGD      
Sbjct: 356 GAKGIAYI--RVREDYDFDTIGAIKDNLTEAQKQALIEKTGAKPGHLLLFGAGDTDTVNK 413

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
             +  R  + ++LG+I+       W+ DFP +E+N EEK+++  H+PFT P    E L+ 
Sbjct: 414 SLSRLRLVLGEQLGLIDPEKINLLWVTDFPMFEYNAEEKRLEALHHPFTAPNP--EDLE- 470

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            DL   +A  YD++ NG EI  G +R +  EV  + F+ +G+S E   N+FG L  AF+ 
Sbjct: 471 -DLAQARALAYDMIFNGIEIGGGSLRIYQREVQEKVFATIGLSPEEAYNKFGFLLEAFEY 529

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +PSTV+ +QL+EL +  
Sbjct: 530 GTPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQASCLLTSAPSTVAAKQLKELSVAS 589

Query: 592 VENP 595
              P
Sbjct: 590 TYKP 593


>gi|302389915|ref|YP_003825736.1| aspartyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200543|gb|ADL08113.1| aspartyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 591

 Score =  450 bits (1158), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 250/594 (42%), Positives = 359/594 (60%), Gaps = 16/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG L   + G  V L+GWV   R  GG+IF+D+RD  G+ QVV +P+     FE A
Sbjct: 7   RTHHCGLLTSENTGQDVVLAGWVQTRRDLGGLIFVDLRDRSGVVQVVFSPEYNRQAFEKA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+V+ + G V  R  E +N  I TG+IE+  +++E+L+ A+  P P+  + +  E
Sbjct: 67  DELRSEFVIAVKGKVFKRPEENVNPKIPTGEIEVFVEELEVLNKAKTPPFPIEDDIKVDE 126

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LDLRR ++  N+  R ++  ++R  +    FIE  TP+LT S+PEGARDFLV
Sbjct: 127 SLRLKYRYLDLRRPSMLHNMTFRHKVNKAIRDFLDENGFIEVETPMLTRSTPEGARDFLV 186

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G+FYALPQ+PQ +KQ+LM +G +RY+QI  CFRDED R+DR P EF QLD+EMS
Sbjct: 187 PSRLNPGTFYALPQSPQLFKQILMVAGMERYYQITRCFRDEDLRADRQP-EFTQLDIEMS 245

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ DD+++  E +++ V E+ + G TV   F RI Y DA+  YG+DKPD R  + M +V
Sbjct: 246 FVDVDDVISLNEKLVKYVVEK-TTGRTVEIPFRRITYRDAMEIYGSDKPDTRFGLEMVDV 304

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           T+    +EF+VFS+  +   G +V  I  K      +R   D + E A+  G  GLA+I 
Sbjct: 305 TDIAEKTEFKVFSE--AAKSGGKVKGINIKNSAEQFSRRQIDELVEKAKEFGAKGLAWI- 361

Query: 361 WRLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARN 418
                S +  G+  P+AK       + +  R+  Q GD   F+A    K   +     R 
Sbjct: 362 -----SLSSEGIKSPIAKFFAREVMDELLERMGAQPGDLLIFVADSDSKLVVTSLGQLRL 416

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           H+ ++L +I+ N   F W+++FP  EW+EEEK+    H+PFT P      L   D   ++
Sbjct: 417 HLGRQLNLIDKNKLNFLWVVEFPLLEWDEEEKRYVAMHHPFTSPMDEDLDLLEEDPGRVR 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG E+  G IR H +E+  + F  +G +KE   N FG L RAF+ G PPHGG
Sbjct: 477 AKAYDLVLNGTELGGGSIRIHRTEIQERMFKVLGFTKERAWNNFGFLLRAFEYGTPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IA G+DR+VMLLLG  ++R+   FP +QN   LL  +P+ V   QL+EL +++ 
Sbjct: 537 IAYGLDRMVMLLLGLNSIRDCIAFPKTQNASCLLTEAPAQVEPRQLKELYIQVT 590


>gi|332975401|gb|EGK12295.1| aspartate--tRNA ligase [Desmospora sp. 8437]
          Length = 594

 Score =  450 bits (1158), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/587 (42%), Positives = 350/587 (59%), Gaps = 12/587 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEI 61
           ++ H CG L    VGS V L+GWV + R  GG+IFLD+RD  G  QVV NP+ +    EI
Sbjct: 5   FKNHDCGLLTKEHVGSTVILNGWVRKWRNLGGLIFLDLRDRSGTVQVVINPEVSPQAAEI 64

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  VRSE+VL + G V++RS ETIN  + TG+IE+ A+++E+L+ ++  P  V  + E  
Sbjct: 65  ADKVRSEYVLAVQGEVVARSEETINPRMQTGEIEVLAREVEVLNASKTPPFTVADDTEVE 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R KYR+LDLRR  + + ++ R R +  +R  +    FIE  TP+LT SSPEGARD+L
Sbjct: 125 ETTRLKYRYLDLRRPVMQETLLLRHRAMQMVRRFLDEHGFIEVETPMLTKSSPEGARDYL 184

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SG +RYFQI  CFRDED R+DR P EF Q+D+E 
Sbjct: 185 VPSRVHEGEFYALPQSPQIFKQLLMVSGMERYFQIVRCFRDEDLRADRQP-EFTQIDIEA 243

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+E D+++  ME ++  +F E + G  V   F RI Y +A+ R+G+D+PDLR  + + +
Sbjct: 244 SFLETDELMAMMEEMVARLFRE-TIGVEVERPFRRIPYREAMERFGSDRPDLRFGMELVD 302

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           ++E    S F+VF+   +V  G  V AI  KG    +R   D   E A+  G  GLA++ 
Sbjct: 303 LSEMVKGSSFKVFAS--TVADGGRVKAINVKGRADWSRKVIDSWGEVAQQLGAKGLAWLA 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R  E G     GPVAK L+      I    + + GD   F+A  P        + R  +
Sbjct: 361 VR--EEGT---KGPVAKFLSESEWHDIMKATEAETGDLLLFVADRPRVVNEVLGELRIRL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I    ++F W+  FP   ++EEE +    H+PFT P      L  +D   ++A 
Sbjct: 416 ARELDLIPAGVYKFAWVTHFPLLSYDEEEGRYYAEHHPFTSPVDEDIPLLKSDPSQVRAK 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G  R H  E+    F  +G + E  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDMVLNGYEVGGGSRRIHRREIQEMMFEALGFTMEEAKEQFGYLLEAFEYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
            G DR+VMLL G  N+R+   FP + +   L+ G+PS VS  QL EL
Sbjct: 536 FGFDRLVMLLAGRSNLRDTIAFPKTASATCLMTGAPSPVSKHQLDEL 582


>gi|317051008|ref|YP_004112124.1| aspartyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946092|gb|ADU65568.1| aspartyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 592

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/589 (41%), Positives = 353/589 (59%), Gaps = 13/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTHSCG LG+ ++G  V L GW HR R HGG+IF+D+RD  G+TQ+V +P  +    E  
Sbjct: 9   RTHSCGQLGIENIGESVTLMGWAHRRRDHGGLIFVDLRDRDGLTQLVMDPQVNQEVHEKG 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +S+RSE+VL I G V  R   T+N  + TG IE+   ++ I+SVA+  P  +    +  E
Sbjct: 69  ESIRSEYVLAIVGTVRHRPEGTVNEKLKTGAIEVVVSELRIVSVAKTPPFMIDEYTDVSE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + K+I+ R R+  SMR  +  + F++  TP+LT S+PEGARD+LV
Sbjct: 129 NLRLKYRYLDLRRPEIQKHIINRHRLTRSMREYLYEKGFLDIETPVLTKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G F+ALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R+DR P EF QLDMEMS
Sbjct: 189 PSRVNPGRFFALPQSPQLFKQLLMVSGYDKYFQIVKCFRDEDLRADRQP-EFTQLDMEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++ +   +E +++ ++ + ++   +   F R+ Y +A+ R+G+DKPD R  + + ++
Sbjct: 248 FIDREQLFALIEGLMQKLWRDIAD-REIPVPFPRLSYQEAMDRFGSDKPDTRFGLELQDL 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++    S F+VF   L    G +V AI   G    +R   D + +     G  GLAYI  
Sbjct: 307 SD-LDFSGFKVFQSAL--ENGGQVKAINGVGCEHLSRKDIDDITKDLAVYGAKGLAYIKV 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R +E        P+ K L     EAI  R+  + GD  FF+A       +     R  +A
Sbjct: 364 RENEY-----QSPITKFLGEATLEAIVKRVGAKPGDCIFFMADTRSVVANSLGQLRLILA 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           Q LG+I+ N + F W+ DFP  EW+E+ K+    H+PFT P      L  +D  + +A  
Sbjct: 419 QRLGLIDNNQYNFLWVTDFPLLEWDEDSKRFMAMHHPFTSPLEEDFGLLESDPGAARARA 478

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  E+  + FS +GI +E    +FG L  A + G PPHGGIA 
Sbjct: 479 YDLVLNGSEIGGGSIRIHTMELQQRMFSLLGIGEEEARMKFGFLLDALEFGAPPHGGIAF 538

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DRI M+L G  ++R+V  FP +Q    LL  +PS V   QL+EL ++
Sbjct: 539 GVDRIAMILSGTSSIRDVIAFPKTQKATCLLTDAPSVVDQRQLQELHIK 587


>gi|295399337|ref|ZP_06809319.1| aspartyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294978803|gb|EFG54399.1| aspartyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 591

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/598 (40%), Positives = 365/598 (61%), Gaps = 17/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ CG++    VG  V L GWV + R  GG+IF+D+RD  GI QVV +P+ +     +A
Sbjct: 4   RTYYCGEITEKAVGEKVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFSPEVSKEALHVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+VL ++G V++R   T+N NI TG+IE+ A+++ I++ A+  P  +  + +  E
Sbjct: 64  EKVRNEYVLSVEGTVVAREEGTVNPNIPTGKIEIQAERVTIINEAKTPPFTIADQTDVAE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + + +  R R+  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 EVRLKYRYLDLRRPVMFRTLQLRHRVTKAVRDFLDGEGFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GF+RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHPGEFYALPQSPQVFKQLLMVAGFERYYQIARCFRDEDLRADRQP-EFTQIDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q+DI+   E ++  V  + + G  VS  F R+ YD+A+ RYG+DKPD R  + + +V
Sbjct: 243 FMSQEDIMQLTERMMAHVM-KVAKGIEVSLPFPRMSYDEAMSRYGSDKPDTRFGLELVDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E   HS F+VF+   +V  G +V AI  KG     +R   D + E+    G  GLA++ 
Sbjct: 302 SEIVKHSSFKVFAG--AVANGGQVKAINVKGAASTYSRKDIDALAEFVARYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK         +   L  +DGD   F+A             R  +
Sbjct: 359 -KVEEGGL---KGPIAKFFTEEERSGLIETLMAEDGDLLLFVAARKEVVADALGALRLKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479
            ++L +I+   F F WI+D+P  E++EE+ +   AH+PFTMP +  +  L+ +    ++A
Sbjct: 415 GKDLNLIDETKFNFLWIIDWPLLEYDEEDGRYYAAHHPFTMPVREDLPQLETSP-EKVRA 473

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+E+  G +R    +V  + F  +G ++E    +FG L  AF+ G PPHGGI
Sbjct: 474 QAYDLVLNGYELGGGSMRIFERDVQEKMFRALGFTEEEARKQFGFLLEAFEYGTPPHGGI 533

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VMLL G  N+R+   FP + +   LL  +PS VS +QL E  LR+V  P+K
Sbjct: 534 ALGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVSEQQLAE--LRLVVQPEK 589


>gi|332799389|ref|YP_004460888.1| aspartyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332697124|gb|AEE91581.1| aspartyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 590

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/594 (41%), Positives = 356/594 (59%), Gaps = 19/594 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R + CGDL     G  V LSGWV   R  GG+IF+D+RD  GI QVV NP+    F+ A 
Sbjct: 7   RNYYCGDLTKEHEGEEVCLSGWVQTRRDLGGLIFVDLRDRSGIVQVVFNPERKEAFKKAD 66

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+V+ + G V  R AE +NA I TG IE+  ++++ILS A+  P P+    +  E 
Sbjct: 67  EIRSEYVIAVKGKVCRRPAENVNAKISTGYIEVIGEELDILSKAKTPPFPIEDNIKVDEI 126

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR ++  N++ R++I  ++R  +    F+E  TP+LT S+PEGARD+LVP
Sbjct: 127 VRLKYRYLDLRRPSMQYNMIFRSKINKAIRDFLDENGFVEVETPVLTKSTPEGARDYLVP 186

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+N G FYALPQ+PQ +KQ+LM +G DRY+QIA CFRDED R+DR P EF QLD+EMSF
Sbjct: 187 SRLNPGKFYALPQSPQLFKQILMVAGMDRYYQIARCFRDEDLRADRQP-EFTQLDIEMSF 245

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+ DDI++  E +++ V E+ + G  V   F R+ Y+ A+ +YG+DKPD R  + M +++
Sbjct: 246 VDVDDIISLNEKLIKYVVEKVT-GIKVEIPFARMTYEQAMEKYGSDKPDTRFGMEMVDIS 304

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361
                S F+VFS +  V  G  V  I  K GG   +R   D + E A+  G  GLA++  
Sbjct: 305 NIVGSSSFKVFSDV--VKDGGRVKGINIKNGGKAFSRRQIDELVEKAKEFGAKGLAWM-- 360

Query: 362 RLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC-SFAADAR 417
                 NV   G   P+ K  +    + I+ + D + GD   FIA    +   +     R
Sbjct: 361 ------NVTSEGIKSPITKFFDEQTIKEIKDKFDCEVGDLIVFIADSNAELVMTSLGSLR 414

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            ++A+ L +I+ N   F WI +FP  E+NEEEK+    H+PFT P      L   +   +
Sbjct: 415 IYLAKALNLIDKNKLNFLWITEFPLLEYNEEEKRFVAKHHPFTSPMEEDIPLLDKEPSRV 474

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H + +  + F  +G SKE   N FG L +AF+ G PPHG
Sbjct: 475 RAKAYDIVLNGTELGGGSIRIHDAALQEKMFETLGFSKERAWNNFGFLLKAFEYGTPPHG 534

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DR++MLLLG  ++R+   FP +QN    +  +PS V  +QL+EL +++
Sbjct: 535 GIAYGLDRMIMLLLGLDSIRDCIAFPKTQNASCPMTDAPSEVDAKQLKELHIQV 588


>gi|170289122|ref|YP_001739360.1| aspartyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|238688849|sp|B1LBH9|SYD_THESQ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|170176625|gb|ACB09677.1| aspartyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 579

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 250/596 (41%), Positives = 358/596 (60%), Gaps = 25/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L  +D G  V+L GWV R+R  GG+ F+D+RD YG TQ+V + +S  + +   
Sbjct: 3   RTHTCGELRAADEGKKVKLCGWVDRIRDLGGVRFIDLRDRYGETQIVCDVNSKAYSVVDE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E V+ ++G V  R   T N NI TG+IE+ A++IEILS+A+  PLP +      E +
Sbjct: 63  LTRESVVLVEGTVRKRPEGTENPNIETGEIEVVAERIEILSLAD--PLPFYPGETPKEEM 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR++DLR + + +NI+ R RI   +R       F+E  TP LT S+PEGARDFLVPS
Sbjct: 121 RLKYRYIDLRSERMKRNIILRYRISKIIRDYFDELGFLEIETPFLTKSTPEGARDFLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D+EMSFV
Sbjct: 181 RLRPGKFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQVDVEMSFV 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +D+LN  E ++  VF E S+G  +   F RI YD+A+ +YGTDKPD R  + + +   
Sbjct: 240 DVEDVLNVSEGMVSRVFRE-SSGIDLKVPFDRIPYDEAMEKYGTDKPDRRYGMELRDFGY 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  +EF+V   +L      + + +P      +R   + + E  +  G  GL  I+++LD
Sbjct: 299 AFETTEFKVIRNVLDEGGSVKGFIVPGFASEMSRKKGEELMERMKELGLGGL--IWFKLD 356

Query: 365 ESGNVAGMGPVAKHL-----NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARN 418
             G +    P  KHL      I  TE      +M +GD C   A       + A    R 
Sbjct: 357 --GGIT--SPHLKHLEKEFRKIAETE------NMNEGDVCLIAAHTDRNLLNEALGTLRL 406

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I +E        F+  W++DFP++EW+EEE++    H+PFTMP   +E+L G+D   ++
Sbjct: 407 EIGKEHFSHLAKGFDVLWVVDFPYFEWSEEEERFVARHHPFTMPV--LETL-GDDYTKVR 463

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+  G IR H  ++  + F  +G+S+E  + +FG    AF+ G+PPHGG
Sbjct: 464 AKAYDLVINGYEVGGGSIRIHRRDIQEKIFELLGLSEEEAQKKFGFFLEAFRYGVPPHGG 523

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA G+DR+V ++ G  ++REV  FP + N   LL G+P+ V   QLREL +RI E 
Sbjct: 524 IAFGLDRLVSIIAGESSIREVIAFPKTGNGVCLLTGAPAEVDERQLRELRIRIEEG 579


>gi|317151960|ref|YP_004120008.1| aspartyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942211|gb|ADU61262.1| aspartyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 607

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/592 (41%), Positives = 354/592 (59%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH   +L  +D+G  V L GWV   R HGG+IFLD+RD  G+TQVV NP+      E A
Sbjct: 24  RTHHNNELTAADLGKTVCLMGWVQFRRDHGGLIFLDLRDREGLTQVVFNPEGNQDVHERA 83

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++R+E+V+ I G V  R     N N++TG++E+  ++ ++L+ +E  P P+    E  E
Sbjct: 84  HAIRAEYVVAIKGRVRMRPEGMANKNLVTGEVEIEVEEYKLLNTSETPPFPIEDRVEVGE 143

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYRFLDLRR +L +N + R +   ++R  + A  F+E  TP+LT S+PEGARDFLV
Sbjct: 144 NLRLKYRFLDLRRPSLARNFIIRNKAAQAVRRYLDALGFLEIETPVLTKSTPEGARDFLV 203

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVNQG FYALPQ+PQ +KQ+LM SG DRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 204 PSRVNQGEFYALPQSPQLFKQMLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 262

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F ++  I +  E ++  +F E + G  + + F R+ Y+DA+R YG DKPDLR  +   ++
Sbjct: 263 FTDEAQIQDMAEGLVTKIFAE-TIGAALPDVFPRMTYNDAMRDYGVDKPDLRFGLKHIDI 321

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+ F +S F+VF+    V    +V  +P  GG  +R   D   ++    G  GLA+I  +
Sbjct: 322 TDAFRNSGFKVFASSELV----KVMVVPG-GGELSRKEIDDYTKFVEIYGSKGLAWI--K 374

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G      P+ K  +      +R R D + GD  FF AG      +   + R  + +
Sbjct: 375 VKEDGE--WQSPIVKFFSEDEIATLRERTDCKPGDILFFQAGSADIANAALGNLRCELGE 432

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
             G+I+   F+  WI DFP  E+N +EK+    H+PFT  Q    +   +D  +  A  Y
Sbjct: 433 RFGLIDPKVFKPVWITDFPLLEYNPDEKRYVARHHPFTSAQPDQMATLASDPGNALARAY 492

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H +E     F+ +GI  +    +FG L  A + G PPHGGIA G
Sbjct: 493 DMVINGYEVGGGSIRIHTAEQQRIMFAALGIDGDEAREKFGFLMDALKFGAPPHGGIAFG 552

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR++M++ G+K++R+V  FP +Q    L+  +PS V  +QLRELG+R+ E 
Sbjct: 553 LDRLIMIITGSKSIRDVIAFPKTQKATCLMTEAPSEVPSKQLRELGIRLREK 604


>gi|114330631|ref|YP_746853.1| aspartyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122314381|sp|Q0AIE4|SYD_NITEC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|114307645|gb|ABI58888.1| aspartyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 593

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 251/590 (42%), Positives = 353/590 (59%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  + L GWVHR R HGG+IF+D+RD  GI Q+V +PD+ A F IA+
Sbjct: 2   RTDYCGAINTRHLGRTITLCGWVHRRRDHGGVIFIDLRDREGIVQIVCDPDNVAAFPIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+VL I GLV  R   T+N  I +G+IE+    IEIL+ +   P  +  +    E+
Sbjct: 62  KIRNEFVLEITGLVRHRPEGTVNRGIPSGEIEVLVSTIEILNPSLTPPFQM-DDDNLSEA 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR +YR+LDLRR  +  NI  R ++  + R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 IRLEYRYLDLRRPAMQHNIRLRHKVTMATRVFLDQHGFIDVETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVNVGCFFALPQSPQLFKQLLMVSGFDRYYQITRCFRDEDLRADRQP-EFTQIDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++DI++ ME+++R +F +  N  ++ + F RI Y DA+ RYG+DKPDLR P+ +  +T
Sbjct: 240 LQENDIMDLMEDMIRRLFADVIN-VSLPDPFPRISYADAMFRYGSDKPDLRVPLELTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +      F+VF +  +  PG  V A+   GGG  +R   D    +    G  GLAYI   
Sbjct: 299 DLMQDVPFQVF-RDAAQKPGGRVAALRVPGGGELSRKEIDEYTRFVGIYGAKGLAYIKIN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K L     +++  R   Q+GD  FF   D +K  + A  A R  I 
Sbjct: 358 DLTKGMEGLQSPILKFLPEPVVQSMLERTQAQNGDLVFF-GADKVKTVNDALGALRVKIG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E G+   N ++  W++DFP +EW+EEEK+    H+PFT P  G E     D     +  
Sbjct: 417 HERGLA-TNLWQPLWVVDFPMFEWDEEEKRWQALHHPFTAPSQGHEDFLATDPGKALSRA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  +V  + F  + I+ +  + +FG L  A Q G PPHGGIA 
Sbjct: 476 YDMVLNGMEIGGGSIRIHRQDVQSKVFQALNIADDEAKLKFGFLLDALQYGAPPHGGIAF 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DRIV ++ G  ++R+V  FP +Q    LL  +PSTV  +QLREL +R+
Sbjct: 536 GLDRIVAMMTGTDSIRDVIAFPKTQRAQCLLTQAPSTVEEKQLRELHIRL 585


>gi|282895988|ref|ZP_06304019.1| Aspartyl-tRNA synthetase [Raphidiopsis brookii D9]
 gi|281199098|gb|EFA73968.1| Aspartyl-tRNA synthetase [Raphidiopsis brookii D9]
          Length = 598

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/607 (41%), Positives = 365/607 (60%), Gaps = 27/607 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG+     +G  V L GWV R R HGG+IFLD+RD  GI QVV++P      ++IA
Sbjct: 2   RTHYCGEPRKHHIGENVILYGWVDRHRDHGGVIFLDLRDRSGIVQVVSDPQRTPESYQIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF-GERE- 119
            S+R+E+V+ I G V  R AE++N  ++TG++E+ A  IE+L SV++ LP  V  GE E 
Sbjct: 62  NSIRNEYVVKIIGRVTERPAESLNPRLLTGEVEVYADHIELLNSVSKNLPFQVSSGETEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRR+ + KNI  R +++ +MR  +   E FIE  TP+LT S+PEGAR
Sbjct: 122 VREDVRLKYRYLDLRRERMAKNIQLRHQVVKAMRRYLEDQEGFIEIETPVLTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+++PSRVN+G ++ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYILPSRVNEGQWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +++I+   E ++  +F+   + + + + F R+ Y DA+ +YGTDKPD R  + 
Sbjct: 241 MEMSFMSEEEIIQLNEKLVCHIFKTVQDID-LPHPFPRLRYQDAMHKYGTDKPDTRYGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARS 350
           + +V++      F+VF  +++     ++  IP     GN A          D   E A +
Sbjct: 300 LVDVSDVVQDCGFKVFRDVVAGGGMVKILPIPH----GNDAISNVRIKPGGDIFREAAEA 355

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
            G  GLAYI  R+ ++G +  +G +  +L     + I  R   ++G    F A D     
Sbjct: 356 -GAKGLAYI--RVRDNGEIDTIGAIKDNLTTAQKQEILTRTAAKEGHLLLFAAADASVVN 412

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                 R  IA+E  +I      F WI +FP +EWN  EK+++  H+PFT P        
Sbjct: 413 KTLDRLRQFIAREFNLIPPGKMNFLWITEFPMFEWNANEKRLEALHHPFTAPHPD----D 468

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            +DL + +A  YDLV NGFE+  G +R +  E+  + F  +G+S E   N+FG L  AF+
Sbjct: 469 LHDLKTARAQAYDLVLNGFEVGGGSLRIYQREIQARVFETIGLSSEEARNKFGFLLEAFE 528

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR+VMLL   +++R+V  FP +Q    LL  +P+ V ++QL+EL + 
Sbjct: 529 YGTPPHGGIAYGVDRLVMLLAQEESIRDVIAFPKTQQARCLLTDAPAMVELKQLKELHVA 588

Query: 591 IVENPKK 597
               PK+
Sbjct: 589 STTKPKE 595


>gi|147677384|ref|YP_001211599.1| aspartyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|189082107|sp|A5D3E3|SYD_PELTS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146273481|dbj|BAF59230.1| aspartyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 603

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/591 (41%), Positives = 353/591 (59%), Gaps = 12/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H CG+L V   G  V L+GWV R R HGG+IF+D+RD  GI QVV +PD     F  A
Sbjct: 10  RSHYCGELRVEHAGLEVVLTGWVQRRRDHGGLIFIDLRDRTGIVQVVFSPDLHEEAFLKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VR+E+VL + G V  R   T N N+ TGQ+E+   ++ IL+ A+  P  +    +  E
Sbjct: 70  EAVRNEYVLAVRGTVRERPEGTANPNLATGQVEVLGCELRILNRAKTPPFYIEDGVDVDE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YR+LDLRR  + + ++ R R   S+R  +    F+E  TP+LT S+PEGARD+LV
Sbjct: 130 NLRLRYRYLDLRRPEMQEALIFRHRAAKSVRDFLDEHGFLEIETPMLTRSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQ+LM +G DRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRVNPGRFYALPQSPQLFKQILMVAGMDRYFQIARCFRDEDLRADRQP-EFTQIDIEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ DD+L   E ++  +  E + G  +   F R+ Y +A+ R+G+DKPD R  + + ++
Sbjct: 249 FVDVDDVLELTEGMVARLCREVA-GLDIPRPFPRLSYREAMDRFGSDKPDTRFGMELKDI 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++      F+VF+   +V  G +V  I A G G  +R   D +  +A      GLAY   
Sbjct: 308 SDIASGCGFKVFAS--AVAGGGQVKGINAAGCGSFSRKEIDDLTAFAAVYKAKGLAYFI- 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            ++E G  +    ++K        AI  R+D + GD   F+A  P    +     R H+ 
Sbjct: 365 -VNEEGVKSA---ISKFFTEAELSAILERMDAKPGDLLLFVADKPEVVAASLGALRLHLG 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG+I    + F W++DFP  E+N+EE + +  H+PFT P+     L  +D   ++A  
Sbjct: 421 ERLGLIPEGTYHFLWVVDFPLLEYNQEEGRYEAMHHPFTSPRETDIPLLESDPGRVRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR H  +V  + F+ +GI +E    +FG L  AF+ G PPHGGIA 
Sbjct: 481 YDLVLNGTEVGGGSIRIHRRDVQEKVFTAIGIDREEASEKFGFLLEAFEYGTPPHGGIAL 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G DR+VMLL G   +R+V  FP +Q+  DL+  +P  V+ EQLREL +R V
Sbjct: 541 GFDRLVMLLAGKNTIRDVIAFPKTQSATDLMTMAPGPVAEEQLRELHIRTV 591


>gi|323142309|ref|ZP_08077141.1| aspartate--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413193|gb|EFY04080.1| aspartate--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 598

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/589 (41%), Positives = 361/589 (61%), Gaps = 11/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H CG L     G  V L GWV + R HGG+IF+D+RD  GI QVVA+P+SA   F+ A
Sbjct: 6   RSHHCGVLTKEQAGEQVVLCGWVAKRRDHGGLIFIDLRDRSGIVQVVADPESAGSSFKTA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +R+E+V+ + G V  R  +TIN NI TG IE+ A  IE+L+ A+  P  +    +  E
Sbjct: 66  EDIRNEYVIKVIGNVRLRDEDTINENIPTGTIEVLAHDIEVLNGAKTPPFYIKDGIDTDE 125

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + +N++ R ++   MR  +   +F+E  TP+L  S+PEGARD+LV
Sbjct: 126 NLRLKYRYLDLRRPEMQRNLILRHKVAKLMRDYLDDNHFLEIETPMLCKSTPEGARDYLV 185

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQLLM +G +RYFQIA CFRDED R+DR P EF QLDMEMS
Sbjct: 186 PSRVNPGKFYALPQSPQIFKQLLMVAGMERYFQIARCFRDEDLRADRQP-EFTQLDMEMS 244

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+E D+IL  ME ++  +F+  + G  +   F R+ +DDA+ R+G+DKPDLR  + + NV
Sbjct: 245 FMEVDEILELMEGLIHHIFKG-ALGKDIQIPFQRLTWDDAMDRFGSDKPDLRFGMELKNV 303

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           +E      F+VF+ +++   G +V  I  KG     R   D + ++    G  G+A++  
Sbjct: 304 SEAVQGCTFQVFNNVIA--NGGQVKCINVKGYADIPRRQLDELVKFCGIYGAKGMAWL-- 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +    G V     +AK  +  N EAI+   +++ GD   F+A  P    +     R  +A
Sbjct: 360 QFPAEGGVK--SSIAKFFSDENIEAIKKAAEVEAGDLLLFVADKPSVVAASLGALRIEMA 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +  G+I+ +   F W++DFP +E+NEEEK+    H+PFT P+     L   +   + A  
Sbjct: 418 KRRGLIDPDKLAFTWVVDFPMFEYNEEEKRYVAMHHPFTAPRDEDLPLLLTNPGKVYAKA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  +V  + F  +G+S E  + +FG +  AF+ G PPHGG+A 
Sbjct: 478 YDMVLNGTEIGGGSIRIHRRDVQKKVFEAIGLSDEEAQEKFGFMMNAFEYGAPPHGGLAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR++M++    ++R+V  FP +Q+  DL+  +P+ V  +QLREL ++
Sbjct: 538 GLDRLIMIMAQRDSIRDVIAFPKTQSASDLMTQAPNDVDEKQLRELHIK 586


>gi|15644191|ref|NP_229240.1| aspartyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6919972|sp|Q9X1F4|SYD_THEMA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|4982006|gb|AAD36510.1|AE001796_2 aspartyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 579

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 250/596 (41%), Positives = 359/596 (60%), Gaps = 25/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L  +D G  V+L GWV R+R  GG+ F+D+RD YG TQ+V + +S  + +   
Sbjct: 3   RTHTCGELRATDEGKKVKLCGWVDRIRDLGGVRFIDLRDRYGETQIVCDVNSEAYSVVDE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E V+ ++G V  R   T N NI TG+IE+ A++IEILS+A+  PLP +      E +
Sbjct: 63  LTRESVVLVEGTVRKRPEGTENPNIETGEIEVVAERIEILSLAD--PLPFYPGETPKEEM 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR++DLR + + +NI+ R RI   +R       F+E  TP LT S+PEGARDFLVPS
Sbjct: 121 RLKYRYIDLRSERMKRNIILRYRISKIIRDYFDELGFLEIETPFLTRSTPEGARDFLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D+EMSFV
Sbjct: 181 RLRPGKFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQVDVEMSFV 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +D+LN  E ++  VF+E S+G  +   F RI YDDA+ +YGTDKPD R  + + +   
Sbjct: 240 DVEDVLNVSEGMVSRVFKE-SSGIDLKVPFDRIPYDDAMEKYGTDKPDRRYGMELRDFGY 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  +EF+V   +L+     + + +P      +R   + +    +  G  GL  I+++LD
Sbjct: 299 AFETTEFKVIRNVLNEGGSVKGFIVPGFASEMSRKKGEELMARMKELGLGGL--IWFKLD 356

Query: 365 ESGNVAGMGPVAKHL-----NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARN 418
             G +    P  KHL      I  TE      +M +GD C   A       + A    R 
Sbjct: 357 --GGIT--SPHLKHLEKEFRKIAETE------NMNEGDVCLIAAHTDRNLLNEALGTLRL 406

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I +E        F+  W++DFP++EW+EEE++    H+PFTMP   +E+L G+D   ++
Sbjct: 407 EIGKEHFSHLAKGFDVLWVVDFPYFEWSEEEERFVARHHPFTMPV--LETL-GDDYTKVR 463

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+  G IR H  ++  + F  +G+S+E  + +FG    AF+ G+PPHGG
Sbjct: 464 AKAYDLVINGYEVGGGSIRIHRRDIQEKIFELLGLSEEEAQKKFGFFLEAFRYGVPPHGG 523

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA G+DR+V ++ G  ++REV  FP + N   LL G+P+ V   QLREL +RI E 
Sbjct: 524 IAFGLDRLVSIIAGESSIREVIAFPKTGNGVCLLTGAPAEVDERQLRELRIRIEEG 579


>gi|89100800|ref|ZP_01173653.1| aspartyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084503|gb|EAR63651.1| aspartyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 591

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/591 (40%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ CG++    +G  V L GWV + R  GG+IF+D+RD  G+ QVV NP+++      A
Sbjct: 4   RTYFCGEVTEKSIGEKVTLKGWVQKRRDLGGLIFIDLRDRTGLVQVVFNPETSPEALAAA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +R+E+VL ++G V++R   TIN N+ TG+IE+SA+ + I++ A+  P  +  + +  E
Sbjct: 64  EKIRNEYVLSVEGKVVAREPGTINENLPTGKIEVSAEAVTIINEAKTPPFVIADQTDVSE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LD RR  + +    R ++  S+R  + +E F++  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDFRRPVMFETFKMRHQVTKSIRDYLDSEGFLDIETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  G +RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHPGEFYALPQSPQIFKQLLMVGGIERYYQIARCFRDEDLRADRQP-EFTQIDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q+DI++  E ++  V +E   G  ++    R+ Y +A+ RYG+DKPD R  + + N+
Sbjct: 243 FMSQEDIISMTEQMMTKVMKEV-KGIDITLPIQRMTYQEAMDRYGSDKPDTRFAMELVNL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E   +S F+VF+   +++ G EV AI  K      +R   D + E+A   G  GLA++ 
Sbjct: 302 SETLSNSGFKVFAG--AISSGGEVKAINVKDAASKYSRKDIDALTEFASRYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + +E G     GP+AK +      AI+  L ++ GD   F+A             R  +
Sbjct: 359 -KAEEEGL---KGPIAKFVAEEEQAAIKELLGVETGDLLLFVADKKSVVADALGALRLKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F W+ ++P  E++EEE +   AH+PFTMP          D   +KA 
Sbjct: 415 GKELGLIDQSLFNFLWVTEWPLLEFDEEEGRYYAAHHPFTMPNREDLEYLDTDPSKVKAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R    E+  + FS +G SKE    +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIFEREIQEKMFSVLGFSKEEAREQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G+ N+R+   FP + +   LL  +P  VS  QL +L L++
Sbjct: 535 LGLDRLVMLLAGSSNLRDTIAFPKTASASCLLTNAPGEVSEAQLNDLHLQL 585


>gi|225849655|ref|YP_002729889.1| aspartyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|254781744|sp|C0QT74|SYD_PERMH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225645298|gb|ACO03484.1| aspartyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 605

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/597 (40%), Positives = 356/597 (59%), Gaps = 18/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61
           R + CG+L  +++G  VRL GW   VR HGG+IF+++RD  GI QVV +P  +    +E 
Sbjct: 10  RDYFCGELTENNIGDEVRLLGWADSVRDHGGVIFINLRDKEGIIQVVIDPSKSPKEAYEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK VRSE+VL + G V  R A T N  + TG IE++  ++ IL+  + LP P+       
Sbjct: 70  AKKVRSEYVLAVRGRVQRRPAGTENPKLPTGTIEIAVDELRILNTCDILPFPIEDGISAH 129

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +YRFLD+RR  + K ++ R  +  + R  +    F+E  TP+LT S+PEGARDFL
Sbjct: 130 EEVRLRYRFLDIRRPEMMKKLILRHEVYQATREYLAGHGFLEVETPMLTKSTPEGARDFL 189

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+ +G FYALPQ+PQ +KQ+LM SG DRYFQI  CFRDED R DR P EF Q+D EM
Sbjct: 190 VPARLEKGKFYALPQSPQLFKQILMVSGIDRYFQIVKCFRDEDLRKDRQP-EFTQIDFEM 248

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++D++   E ++  +F++   G  +   F R+ Y +AI RYGTDKPDLR  + + +
Sbjct: 249 SFVDEEDVITVSEGLIHYIFKKVL-GIELKLPFKRMSYTEAIERYGTDKPDLRYSLELKD 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +T+     +F+VF    +V  G  V  I  KGG   +R   D + E A+  G  G+A+I 
Sbjct: 308 ITDIAKDVQFKVFKD--TVEKGGIVKGINVKGGSKFSRKEIDDLTEEAKKYGAKGMAWI- 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G++    P+ K         I+  ++ ++GD   FIA             R H+
Sbjct: 365 -KINEDGSL--QSPIVKFFTEEQINKIKEIMEGENGDLLIFIADSYEITHRVLGFLRKHL 421

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-----MESLKGNDL- 474
           A++L +I  N +EF W++DFP  EW+EEE ++   H+PFT P+        E+++   + 
Sbjct: 422 AEKLKLIPENVWEFVWVVDFPLVEWDEEEGRLVALHHPFTSPKEEDIDRLDEAIQDKKVA 481

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           LS ++  YDLV NG EI  G IR H S +  + F  +GIS E  E +FG L  A + G P
Sbjct: 482 LSFRSRAYDLVLNGEEIGGGSIRIHSSHIQKKVFELLGISDEEAEEKFGFLINALKYGAP 541

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PHGG+A G+DRIV L+ G++++R+V  FP +Q     L  +P  V  +QL ELG+ +
Sbjct: 542 PHGGLAFGLDRIVALMTGSESIRDVIAFPKTQKGICPLTDAPDFVQEDQLEELGIEV 598


>gi|304316702|ref|YP_003851847.1| aspartyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778204|gb|ADL68763.1| aspartyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 593

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 250/597 (41%), Positives = 356/597 (59%), Gaps = 25/597 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L + DVG  V + GWV R R  GG+IFL++RD  G+ Q+V +       F+ A
Sbjct: 10  RTHMCGELTLEDVGKSVIVMGWVQRRRDLGGLIFLELRDRTGLIQIVCSEQLSKEAFDKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+VL   G V+ RS E IN N+ TG IE+   + +ILS AE  P  V       E
Sbjct: 70  QHVRNEYVLAAAGEVVRRSDENINPNLETGNIEIYVSEFKILSKAETPPFMVEDRNNVSE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR ++ K ++ R RI   +R  +    FI+  TP+L  S+PEGARD+LV
Sbjct: 130 AIRLKYRYLDLRRPSMQKILMTRYRITRIVRDFLDKNGFIDIETPLLIKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G F+ALPQ+PQ +KQLLM SGFDRY+QIA C RDED R+DR P EF Q+DMEMS
Sbjct: 190 PSRVQPGKFFALPQSPQIFKQLLMISGFDRYYQIAKCLRDEDLRADRQP-EFTQIDMEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE+DD++   E ++  +F+E  + + +   F RI + +A+ R+G+DKPD+R  + + ++
Sbjct: 249 FVEEDDVIALNEKMIARIFKEILDID-LEVPFKRISWQEAMNRFGSDKPDMRFGMELKDL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           +  F  S+F+VF    +V  G  V  I  KG     R   D + E+ ++    GL +I  
Sbjct: 308 SSIFADSDFKVFKD--AVQNGGSVRGINVKGAASMPRRQLDELVEYVKTYKAKGLVWI-Q 364

Query: 362 RLDESGNVAGMGP---VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
            LD+       GP   ++K L       +   ++ + GD    +A    K      DA  
Sbjct: 365 MLDD-------GPRSQISKFLKDDEMTQVVNVMEAEKGDLILIVAD---KNNMVVYDALG 414

Query: 419 HIAQELG----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           H+  E+G    +I+ + +EF W++DFP  E++EEEK+    H+PFT P+     +   D 
Sbjct: 415 HLRLEMGKRYNLIDESKYEFLWVVDFPLLEYSEEEKRFVAMHHPFTAPKDEDIEMLDKDP 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YD+V NG EI  G IR H +E+  + F  +G + E  E RFG L  AF+ G P
Sbjct: 475 GRVRAKAYDIVLNGLEIGGGSIRIHDTELQKKMFKVLGFTDEDAEARFGFLLNAFKYGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PHGGIA G+DR+ M+L G  N+R+V  FP +QN CDL+  SPS VS EQL EL +++
Sbjct: 535 PHGGIAYGLDRLTMILTGTDNIRDVIAFPKTQNACDLMSDSPSEVSKEQLDELHIKV 591


>gi|322420289|ref|YP_004199512.1| aspartyl-tRNA synthetase [Geobacter sp. M18]
 gi|320126676|gb|ADW14236.1| aspartyl-tRNA synthetase [Geobacter sp. M18]
          Length = 594

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/592 (41%), Positives = 351/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           RT  CG+L    +G  V L GWV + R HGG+IF+D+RD  GI QVV +P+  C E    
Sbjct: 10  RTSYCGELRGDHIGREVVLMGWVSKRRDHGGLIFVDLRDRDGIAQVVFDPER-CAEAHAK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+  R+E+VL I G V++R   T+N  + TG++E+   + ++L+ ++ LP  + G  +  
Sbjct: 69  AEGARNEYVLAIKGTVIARPEGTVNPKMKTGEVEVLVNECKLLNPSKALPFTLDGFVDVN 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLR   L +N++ R+++    R  +    F+E  TP LT S+PEGARDFL
Sbjct: 129 ENIRLKYRYLDLRTGQLQQNMILRSKVAQLTRSYLTDNGFLELETPFLTKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N+G FYALPQ+PQ +KQ+LM SGFDRYFQ+  CFRDED R+DR P EF Q+D EM
Sbjct: 189 VPSRINKGEFYALPQSPQLFKQILMVSGFDRYFQVVRCFRDEDLRADRQP-EFTQIDCEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++++DI+  ME ++  +F E + G  V     R+ Y +AIRR+G D PDLR  + +  
Sbjct: 248 SFIDREDIITVMEGLMARIFSE-ARGVKVELPIQRMTYQEAIRRFGVDNPDLRFGLELVE 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +++    S F+VF+ +  V  G  V  +  KG G  +R   D + E+A+  G  GLAY+ 
Sbjct: 307 LSDIVKDSGFKVFADV--VKGGGIVKGMNVKGAGAMSRKEIDDLTEFAKIYGAKGLAYV- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++   G      P+AK         +       +GD   F+A  P          RNH+
Sbjct: 364 -KMTAEG---WQSPIAKFFTPEEIATMDQAFGAVEGDLLLFVADKPKVVNDSLGKLRNHL 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ++G+ + N F F WI DFP  EW+EEEK+    H+PFT P         +D    +A 
Sbjct: 420 AAKMGLTDPNEFRFVWITDFPLLEWDEEEKRWAAVHHPFTAPMDEDLQYVESDPGRCRAK 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG EI  G IR H  EV    F  +G+S+E   ++FG L  A + G PPHGGIA
Sbjct: 480 AYDLVLNGNEIGGGSIRIHQEEVQSLMFKMLGLSEENARSKFGFLLDALEYGTPPHGGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR++ML+ G+ ++R+V  FP +Q    L+  +PS V   QLR+LG+R+ 
Sbjct: 540 FGLDRLMMLITGSDSIRDVIAFPKTQKGACLMSEAPSGVDPLQLRDLGIRLA 591


>gi|319651675|ref|ZP_08005802.1| aspartyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396742|gb|EFV77453.1| aspartyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 591

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/591 (41%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ CG++    +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+ +      A
Sbjct: 4   RTYFCGEVTEKAIGEKVSLKGWVQKRRDLGGLIFVDLRDRTGIVQVVFNPEVSPEALAAA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +R+E+VL I+G V++R   TIN N+ TG+IE+ A+K+ I++ A+  P  +  + +  E
Sbjct: 64  EKIRNEFVLDIEGEVIAREEGTINENLKTGRIEIKAEKVTIINEAKTPPFVIDDKADVSE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R ++  +MR  + +E F++  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPIMFDTFKMRHQVTKAMRDYLDSEGFLDVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+QIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 184 PSRVHPGEFYALPQSPQIFKQLLMVGGFERYYQIARCFRDEDLRADRQP-EFTQVDIEMS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++I+  MEN+++ + +E   G  V   F R+ Y +A+ R+G+DKPD R  + + ++
Sbjct: 243 FMSQEEIIGLMENMMKKIMKEV-KGLDVQLPFPRMTYQEAMDRFGSDKPDTRFGMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E    S F+VF+   +V  G +V AI  K G G  +R   D + E+A   G  GLA++ 
Sbjct: 302 SEIVKESSFKVFAG--AVASGGQVKAINVKKGAGKYSRKDIDALTEFAAVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + +E G     GP+AK +     +A    L ++ GD   F+A             R  +
Sbjct: 359 -KAEEDGL---KGPIAKFVTEDEQKAFYAALSVEPGDLLLFVADKKNVVADALGALRLKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W+ D+P  E++EEE +   AH+PFTMP      L   D   ++A 
Sbjct: 415 GKELDLIDQSKFNFLWVTDWPLLEYDEEEGRYYAAHHPFTMPAREDLDLLDKDPAQVRAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R    +V  + FS +G SKE    +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIFERDVQEKMFSVLGFSKEEAVEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G  N+R+   FP + +   +L  +P  VS  QL +L L +
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCVLTEAPGEVSQSQLNDLHLAL 585


>gi|222100026|ref|YP_002534594.1| Aspartyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254781759|sp|B9K8E5|SYD_THENN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|221572416|gb|ACM23228.1| Aspartyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 579

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/590 (41%), Positives = 351/590 (59%), Gaps = 15/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L V D G  V+L GWV R+R  GG+ F+D+RD YG TQ+V + +S  +E    
Sbjct: 3   RTHTCGELRVEDEGKKVKLCGWVDRIRDLGGVRFIDLRDRYGETQIVCDVNSKAYETVDE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E V+ ++G V  R   T N NI TG+IE+ A++IEILS AE  PLP +      E +
Sbjct: 63  LTRESVVLVEGTVRRRPEGTENPNIATGEIEVVAERIEILSKAE--PLPFYPNETPKEEM 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR++DLR   +  NI+ R  I   +R       F+E  TP LT S+PEGARDFLVPS
Sbjct: 121 RLRYRYIDLRSKRMRDNIILRYNITRVIRRYFDELGFLEIETPFLTKSTPEGARDFLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D+EMSFV
Sbjct: 181 RLRPGKFYALPQSPQLFKQLLMISGFDRYFQIVRCFRDEDLRADRQP-EFTQVDVEMSFV 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +D+L+  E ++  VF E + G  +   F RI Y +A+ +YGTDKPD R  + + ++  
Sbjct: 240 DVEDVLSVSEGMIARVFRE-AIGMDLKTPFDRITYSEAMEKYGTDKPDRRYGMELRDLGY 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRV   +L      + + +P       R   D + E A+  G  GL  I+++++
Sbjct: 299 AFEGTTFRVIRSVLEEGGSVKGFVVPEFASEMTRKKGDELMERAKELGLGGL--IWFKVE 356

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNHIAQE 423
           E      + P  KHL     + I  + ++++GD C   A       + A    R  I +E
Sbjct: 357 EK----IVSPHLKHLE-REFKTIVEKENLKEGDVCLIAAHKDRNLLNEALGTLRLEIGKE 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
                   F+  W++DFP++EW+EEE++    H+PFTMP   +E   G+D   +KA  YD
Sbjct: 412 YFSHLAKGFDILWVVDFPYFEWSEEEERFVARHHPFTMP---VEETLGDDHTKVKAKAYD 468

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G IR H  E+  + F  +G+ +E    +FG    AF+ G+PPHGGIA G+
Sbjct: 469 IVINGYEVGGGSIRIHKREIQEKIFKLLGMREEEAREKFGFFLEAFKYGVPPHGGIAFGL 528

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           DR+V ++ G  ++REV  FP + N   LL G+PS+V  +QLREL +R+ E
Sbjct: 529 DRLVAIIAGENSIREVIPFPKTGNGVCLLTGAPSSVDEKQLRELRIRVEE 578


>gi|125973846|ref|YP_001037756.1| aspartyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|125714071|gb|ABN52563.1| aspartyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
          Length = 595

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/591 (41%), Positives = 354/591 (59%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTH C +L V+DVG  V + GW H+ R  GG+IF+ +RD  GI QVV +   +S  F  A
Sbjct: 10  RTHMCAELTVNDVGKTVTVMGWCHKSRNLGGLIFVTLRDRTGIIQVVFDNTVNSELFAKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +R E+VL + G V+ RS E IN  + TG+IE+ A+++ ILS AE  P+ +  + +  E
Sbjct: 70  EGIRGEYVLAVVGEVVKRSPEAINPKLPTGEIEIIAKELRILSTAESPPIYIEEDSDVNE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + R KYR+LDLRR  + +N++ R R+    R       FIE  TP+LT S+PEGARD+LV
Sbjct: 130 ATRLKYRYLDLRRPDMQRNLMLRHRVAKIARDYFDEHGFIEIETPMLTKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G F+ALPQ+PQ +KQLLM +GFDRY QI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRVHPGKFFALPQSPQLFKQLLMVAGFDRYMQIVKCFRDEDLRADRQP-EFTQIDLEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV  +D+L   E  ++ VF+E  N + +   F+R+ Y +A+ R+GTDKPD+R    + N+
Sbjct: 249 FVNVEDVLTINEGFIKRVFKEAINVD-LEIPFIRMPYKEAMERFGTDKPDIRFGFELVNL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++   +  F+VFS   +V  G  V AI AKG G   +R   D + E+ ++ G  G+A+I 
Sbjct: 308 SDLVENCGFKVFSD--AVKNGGSVRAINAKGCGNKFSRKEIDALGEFVKTYGAKGMAWIV 365

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                 G      P+ K       +A+  R+  + GD   FIA             R  I
Sbjct: 366 -----VGENEHKSPITKFFTEDEIKAVLTRMRAEPGDLICFIADKNEVVFDSLGQLRVEI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++LG+++   F+F W+ +FP  E++EEEK+    H+PFT P      L   D L ++A 
Sbjct: 421 ARKLGLLDNKEFKFLWVTEFPLLEYDEEEKRYVAKHHPFTSPMDEDVELLDTDPLKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H  E+  + F  +G S++   +RFG L  AF+ G PPHGG+A
Sbjct: 481 AYDIVLNGTEIGGGSIRIHSQELQSKMFKLLGFSEKDAWDRFGFLLEAFKYGTPPHGGMA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VML+ G  ++R+V  FP  QN   L+  +P  V  +QL EL +R+
Sbjct: 541 FGLDRLVMLMAGRNSIRDVIAFPKVQNSSCLMTNAPDEVEPKQLEELKIRV 591


>gi|312110103|ref|YP_003988419.1| aspartyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311215204|gb|ADP73808.1| aspartyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 591

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/598 (40%), Positives = 365/598 (61%), Gaps = 17/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ CG++    VG  V L GWV + R  GG+IF+D+RD  GI QVV +P+ +     +A
Sbjct: 4   RTYYCGEITEKAVGEKVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFSPEVSKEALHVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+VL ++G V++R   T+N NI TG+IE+ A+++ I++ A+  P  +  + +  E
Sbjct: 64  EKVRNEYVLSVEGTVVAREEGTVNPNIPTGKIEIQAERVTIINEAKTPPFTIADQTDVAE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + + +  R R+  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 EVRLKYRYLDLRRPVMFRTLQLRHRVTKAVRDFLDGEGFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GF+RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHPGEFYALPQSPQVFKQLLMVAGFERYYQIARCFRDEDLRADRQP-EFTQIDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q+DI+   E ++  V  + + G  VS  F R+ YD+A+ RYG+DKPD R  + + +V
Sbjct: 243 FMSQEDIMQLTERMMAHVM-KVAKGIEVSLPFPRMSYDEAMSRYGSDKPDTRFGLELVDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E   HS F+VF+   +V  G +V AI  KG     +R   D + E+    G  GLA++ 
Sbjct: 302 SEIVKHSSFKVFAG--AVANGGQVKAINVKGAASTYSRKDIDALAEFVARYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK         +   L  +DGD   F+A             R  +
Sbjct: 359 -KVEEGGL---KGPIAKFFTEEERSGLIETLMAEDGDLLLFVADRKEVVADALGALRLKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479
            ++L +I+   F F WI+D+P  E++EE+ +   AH+PFTMP +  +  L+ +    ++A
Sbjct: 415 GKDLNLIDETKFNFLWIIDWPLLEYDEEDGRYYAAHHPFTMPVREDLPQLETSP-EKVRA 473

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+E+  G +R    +V  + F  +G ++E    +FG L  AF+ G PPHGGI
Sbjct: 474 QAYDLVLNGYELGGGSMRIFERDVQEKMFRALGFTEEEARKQFGFLLEAFEYGTPPHGGI 533

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VMLL G  N+R+   FP + +   LL  +PS VS +QL E  LR+V  P+K
Sbjct: 534 ALGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVSEQQLAE--LRLVIQPEK 589


>gi|256004299|ref|ZP_05429281.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281418007|ref|ZP_06249027.1| aspartyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|255991733|gb|EEU01833.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281409409|gb|EFB39667.1| aspartyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316939957|gb|ADU73991.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 595

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/591 (41%), Positives = 354/591 (59%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTH C +L V+DVG  V + GW H+ R  GG+IF+ +RD  GI QVV +   +S  F  A
Sbjct: 10  RTHMCAELTVNDVGKTVTVMGWCHKSRNLGGLIFVTLRDRTGIIQVVFDNTVNSELFAKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +R E+VL + G V+ RS E IN  + TG+IE+ A+++ ILS AE  P+ +  + +  E
Sbjct: 70  EGIRGEYVLAVVGEVVKRSPEAINPKLPTGEIEIIAKELRILSTAETPPIYIEEDSDVNE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + R KYR+LDLRR  + +N++ R R+    R       FIE  TP+LT S+PEGARD+LV
Sbjct: 130 ATRLKYRYLDLRRPDMQRNLMLRHRVAKIARDYFDEHGFIEIETPMLTKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G F+ALPQ+PQ +KQLLM +GFDRY QI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRVHPGKFFALPQSPQLFKQLLMVAGFDRYMQIVKCFRDEDLRADRQP-EFTQIDLEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV  +D+L   E  ++ VF+E  N + +   F+R+ Y +A+ R+GTDKPD+R    + N+
Sbjct: 249 FVNVEDVLTINEGFIKRVFKEAINVD-LEIPFIRMPYKEAMERFGTDKPDIRFGFELVNL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++   +  F+VFS   +V  G  V AI AKG G   +R   D + E+ ++ G  G+A+I 
Sbjct: 308 SDLVENCGFKVFSD--AVKNGGSVRAINAKGCGNKFSRKEIDALGEFVKTYGAKGMAWIV 365

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                 G      P+ K       +A+  R+  + GD   FIA             R  I
Sbjct: 366 -----VGENEHKSPITKFFTEDEIKAVLTRMRAEPGDLICFIADKNEVVFDSLGQLRVEI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++LG+++   F+F W+ +FP  E++EEEK+    H+PFT P      L   D L ++A 
Sbjct: 421 ARKLGLLDNKEFKFLWVTEFPLLEYDEEEKRYVAKHHPFTSPMDEDVELLDTDPLKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H  E+  + F  +G S++   +RFG L  AF+ G PPHGG+A
Sbjct: 481 AYDIVLNGTEIGGGSIRIHSQELQSKMFKLLGFSEKDAWDRFGFLLEAFKYGTPPHGGMA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VML+ G  ++R+V  FP  QN   L+  +P  V  +QL EL +R+
Sbjct: 541 FGLDRLVMLMAGRNSIRDVIAFPKVQNSSCLMTNAPDEVEPKQLEELKIRV 591


>gi|114566350|ref|YP_753504.1| aspartyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318569|sp|Q0AYS1|SYD_SYNWW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|114337285|gb|ABI68133.1| aspartyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 586

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/593 (41%), Positives = 358/593 (60%), Gaps = 12/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+  +L +  VG  V L+GWV   R HGG+IF+D+RD  GI Q+V +P+     F +A
Sbjct: 3   RTHNATELDIHLVGREVMLNGWVDTRRDHGGLIFVDLRDRSGIIQLVFSPEVKEEAFHLA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +RSE+V+ + G +  R   T N N+ TG++E+  + IE+LS A+  P  +  + +  E
Sbjct: 63  EQIRSEYVIAVRGKLSLRPEATENPNLKTGKVEVYVEDIEVLSPAKTPPFYIENDIDVDE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  +  N++ R R++  MR  + +  FIE  TPILT S+PEGARD+LV
Sbjct: 123 NLRLKYRYLDLRRPEMRDNLLLRHRVVKCMRDFLDSRGFIEIETPILTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQ+LM +G ++YFQIA CFRDED R+DR P EF QLDMEMS
Sbjct: 183 PSRVHPGEFYALPQSPQIFKQILMVAGMEKYFQIARCFRDEDLRADRQP-EFTQLDMEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++DI+  +E ++  +F + + G  +   F R+ YDDA+  YG+DKPDLR  + +  +
Sbjct: 242 FVDEEDIIVLVEEMMAEIFFK-AAGKVIRTPFPRLAYDDAMINYGSDKPDLRFGLEIVEL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           +E   +++F+VF+  L    G  V A+ AKG G   R   D +   A   G  G+A+I  
Sbjct: 301 SEMLQNTQFKVFASAL--QSGGVVRALNAKGCGSFTRREIDALGAMAVENGAKGMAWILV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + +E  +     P+ K L+    E I +    + GD   F A             R  + 
Sbjct: 359 QENELRS-----PITKFLSEEEIEQILMTTGAEAGDLILFGADQAEIVARVMGILRLELG 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++ G+I      F W+ DFP  E++EEEK+    H+PFT P+     +  ++   +KA  
Sbjct: 414 RKKGLIAEEELNFVWVTDFPLLEYDEEEKRYQAKHHPFTSPRLEDIEIMDSEPGRVKARA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR H  E   + FS +G+S+E   ++FG +  AF+ G PPHGGIA 
Sbjct: 474 YDLVLNGTELGGGSIRIHRREWQEKMFSVLGMSQEEARDKFGFMLEAFEYGTPPHGGIAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR++MLL G  +VR+V  FP +Q+    +  +PSTVS  QLREL LRI E 
Sbjct: 534 GVDRLLMLLAGRNSVRDVMAFPKTQSASCPMTEAPSTVSARQLRELALRIREK 586


>gi|23099474|ref|NP_692940.1| aspartyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|46577266|sp|Q8EPS0|SYD_OCEIH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|22777703|dbj|BAC13975.1| aspartyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 591

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/593 (40%), Positives = 368/593 (62%), Gaps = 15/593 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIAKSVR 66
            G L   ++G  V L GWV + R  GG+IF+D+RD  G+ QVV NPD +    E A+++R
Sbjct: 7   AGRLNEKNIGEKVLLKGWVQKRRDLGGLIFIDLRDKSGLIQVVFNPDHSKKALETAENIR 66

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           SE+V+ I+G V++R   TIN ++ TG+IE++A  ++IL+ A+  P  +  E +  E +R 
Sbjct: 67  SEYVIEINGTVVARDEATINPSMKTGKIEVNASSVQILNKAKTPPFTIQDETDVSEDVRL 126

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           KYR+LDLRR++L +    R +   S+R  +  ++F+E  TPILT S+PEGARD+LVPSRV
Sbjct: 127 KYRYLDLRRNSLQETFRLRHQTTQSIRNYLNDKDFLEMETPILTKSTPEGARDYLVPSRV 186

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           + G FYALPQ+PQ +KQL+M  GF+RY+QIA CFRDED R+DR P EF Q+D+E SF+  
Sbjct: 187 HPGEFYALPQSPQLFKQLIMMGGFERYYQIARCFRDEDLRADRQP-EFTQIDIETSFLTS 245

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           D+I++  E++++ V +E  + + +S    R+ Y +A+ RYG+DKPD R  + + +V++  
Sbjct: 246 DEIMDMTEHMMKKVMKEVKDID-ISLPLPRMPYQEAMDRYGSDKPDTRFDLELIHVSDIV 304

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIFWRLD 364
             S F+VFS+  +V+ G +V  +  KG   N  R   D++ E+ +     GLA++  + D
Sbjct: 305 ASSGFKVFSQ--AVDNGGKVALLNIKGKADNYSRKDIDKLTEYVKVYDAKGLAWL--KAD 360

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           ES      GP+AK L+      IR R +++ GD   F+A             R ++ +EL
Sbjct: 361 ES---ELKGPIAKFLSEEEVAGIRDRANVEQGDLLLFVADKTNVVYDSLGALRLYLGKEL 417

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQYD 483
           G+I+ + F F W+ D+P  E++E   +   AH+PFT   +  ++ L+  D  S++A  YD
Sbjct: 418 GLIDESKFHFLWVTDWPLLEYDEGLGRYFAAHHPFTSAIEEDLDKLE-TDPASVRANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NGFE+  G IR H  E   Q F  +G S+E   ++FG L  A + G PPHGGIA G+
Sbjct: 477 LVLNGFELGGGSIRIHQKEQQDQMFKVLGFSEEEARSQFGFLLDALEYGAPPHGGIALGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DRI+MLL G  N+R+  LFP + +  DL+  +PS VS +QL+EL +++    K
Sbjct: 537 DRIIMLLAGRSNLRDTILFPKTASASDLMTAAPSGVSDDQLQELSIQLQSGEK 589


>gi|320537881|ref|ZP_08037795.1| aspartyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320145255|gb|EFW36957.1| aspartyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 610

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 238/590 (40%), Positives = 348/590 (58%), Gaps = 11/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           RTH+CG +   D+G  V L+GWV+R R  GGI F+++RD YG+TQVV + D++    ++ 
Sbjct: 26  RTHTCGGIRKQDIGKNVVLNGWVYRKRDLGGIAFINLRDRYGVTQVVIDEDASVELKDLT 85

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R E+ + ++G+V +R    IN  + TG++E+   K+E+LS +E LP  +  +    E
Sbjct: 86  AKLRMEFCIAVEGVVRARPDTMINTAMSTGEVEVKVNKLEVLSKSEVLPFQIDEKTNANE 145

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLR +++ K+I+ R+R+  ++R       F+E  TP    S+PEGARD+LV
Sbjct: 146 DLRLRYRYLDLRSESMQKHIILRSRVSFAVREFFTNHGFLEIETPTFIKSTPEGARDYLV 205

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ YKQ+LM SGFDRYFQIA C+RDED R DR P EF Q+D+EMS
Sbjct: 206 PSRLYPGKFYALPQSPQLYKQILMVSGFDRYFQIARCYRDEDARGDRQP-EFTQIDVEMS 264

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV +DD+L   E +++ VF++  N  T+   F R+ YDDAI  YGTDKPDLR  + M + 
Sbjct: 265 FVSRDDVLRITEEMMQFVFQKTMN-ITLPKTFERLSYDDAINLYGTDKPDLRFDMHMQDA 323

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
                   F VF+  L+     +   +P +    +R   + +   A+     GLA+    
Sbjct: 324 AFMAPLGSFSVFTDALAAGGSIKALVVPGQAEQYSRKKIEELEASAKIYKAKGLAWF--- 380

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIA 421
             + G     G +AK       E  +  L+ Q GD   F+A    K  C+     R+ + 
Sbjct: 381 --KVGEQKLEGGIAKFFEGKEKEITKT-LNAQKGDLVLFVADPSHKTACTALGAVRSKLG 437

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L ++N N F F WI+DFP +EWNE+E+K D AH+ F+ PQ    +    +   +K   
Sbjct: 438 KDLNLLNPNEFRFVWIIDFPLFEWNEDEQKWDPAHHMFSAPQEKYLATLETNQAEVKGDL 497

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+ASG IR H  E+  + F  VG  +   E +FG L  AF+ G PPHGGIA 
Sbjct: 498 YDLVLNGYELASGSIRIHDPELQKRIFKIVGFDESEAEAKFGFLTEAFKYGAPPHGGIAP 557

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VML+ G  +++EV  FP +      +   PS V  +QL EL L+I
Sbjct: 558 GLDRLVMLMAGETSIKEVIAFPKNTFAVGPMEDCPSLVDQKQLDELHLQI 607


>gi|288817673|ref|YP_003432020.1| aspartyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787072|dbj|BAI68819.1| aspartyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751271|gb|ADO44754.1| aspartyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 596

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/601 (40%), Positives = 354/601 (58%), Gaps = 23/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG +   D+G  + L GWVHR+R HGG+IF+D+RD  GI QVV    ++   +EIA
Sbjct: 4   RTKYCGQVSEEDIGKELILCGWVHRIRNHGGVIFIDLRDREGIMQVVVEERTSPKAYEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ SE+V+ + G V  R   T N  + TG  EL AQ+IE+L+ +E LP PV  E    E
Sbjct: 64  DSLSSEYVIAVKGSVRRRPPGTENPKLKTGYYELLAQEIEVLNTSEPLPFPVDEETPVSE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++ +YR++DLRR+++ ++I+ R +    +R   I   F+E  TP LT S+PEGARDFLV
Sbjct: 124 ELKLRYRYIDLRRESMKESILFRHKAYQIIREVFIKHGFVEIETPFLTKSTPEGARDFLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQ+PQ +KQ+LM +GFDRYFQI  C RDED R+DR P EF Q+D EMS
Sbjct: 184 PSRLHPGKFYALPQSPQLFKQILMVAGFDRYFQIVKCLRDEDLRADRQP-EFTQIDFEMS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE++D+++  E ++  +F E   G  +   F R+ Y D + RYGTDKPD R  I + ++
Sbjct: 243 FVEEEDVISFSEELICKLFRELL-GIELKRPFDRMSYKDVLERYGTDKPDRRFGIELVDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +  F ++EF+VF   L    G  V AI  K    +R   D + ++ ++ G  GLA   W 
Sbjct: 302 SNIFKNTEFKVFKDAL--QSGGSVKAINFKNSHLSRKEIDELTKFVQTLGARGLA---WI 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G +    P+ K L+    + +  +    +GD+ FF A             R HIA+
Sbjct: 357 KVEDGKLN--SPITKFLSDEEIKNLLEKTSANEGDTIFFSADKQDMAYKILGSLRLHIAK 414

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-----MESLKGNDLLS- 476
           +  ++  N F+  W++DFP  EW+EEE +    H+PFT P+        E+LK  DL   
Sbjct: 415 KYQLLRDNTFDLLWVVDFPLMEWDEEEGRFVSLHHPFTSPKEEDLPLLEEALKSQDLEEK 474

Query: 477 ------IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
                 ++A  YDLV NG+E+  G IR H  EV    F  +GIS+   E +FG L RA +
Sbjct: 475 KQLLKRVRARAYDLVINGYEVGGGSIRIHRREVQELVFKLLGISEVEAEEKFGFLLRALR 534

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGG+A G+DR++ L+ G  ++R+V  FP +Q     L G+P  VS +QL+++ ++
Sbjct: 535 YGAPPHGGLAFGLDRLIALMRGLDSIRDVIAFPKTQKGICPLTGAPDYVSPKQLKDVHIK 594

Query: 591 I 591
           +
Sbjct: 595 L 595


>gi|327398593|ref|YP_004339462.1| aspartyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181222|gb|AEA33403.1| aspartyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 595

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/596 (40%), Positives = 355/596 (59%), Gaps = 12/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTH CGD+   D+   V L GWV   R HGG+IF+D++D  GI Q+V +P  D    + A
Sbjct: 8   RTHYCGDVRADDIDKEVVLFGWVQNWRDHGGVIFIDLKDREGIVQIVFDPSVDEKIHQEA 67

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RS++ + + G V  R   T+N N+ TG++E+  +K+E+ S  E LP PV       E
Sbjct: 68  SKLRSQYCIGVKGKVRHRPEGTVNPNLKTGEVEVVVEKLEVFSECENLPFPVEEYVHVNE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR+  + +N++ R++   + R  + ++ FIE  TPILT S+PEGARDFLV
Sbjct: 128 EVRLKYRYLDLRKPHMQRNLIMRSKAAFAARNYLHSQGFIEIETPILTKSTPEGARDFLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQ+PQ +KQLLM SG+D+Y+QI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 188 PSRLSPGRFYALPQSPQLFKQLLMVSGYDKYYQITKCFRDEDLRADRQP-EFTQIDLEMS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE+DD++   E +L  +F+E + G  ++  F RI Y +A+ R+G+DKPD+R  + +  +
Sbjct: 247 FVEEDDVIEVTEGILASIFKEVA-GIDINPPFKRISYQEAMDRFGSDKPDMRFGLELKKL 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-GGNRAFCDRMNEWARSQGQPGLAYIFW 361
           T+   ++ F+VF  +  V  G  V+ + AKG     R   D + +     G  GLA+I  
Sbjct: 306 TDIVENTNFKVFRDV--VEKGGIVYGLNAKGCIDFTRKEIDDLTKLVSIYGAKGLAWIKV 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +     N     P+ K  +    + I  RLD + GD  FF+A  P          R  I 
Sbjct: 364 K----ANYELQSPIVKFFSKEEIDGILKRLDAEPGDLLFFMADTPKVVYDSLGALRLEIG 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L + N + F F W++DFP +EWNE+E + +  H+PFT P+        +D   +KA  
Sbjct: 420 RKLNLTNGDEFNFVWVVDFPLFEWNEDENRWEAMHHPFTSPKPEDLEYLESDPARVKARA 479

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+  NG EI  G IR H S+V  + F  +GIS E  + +FG L  A + G PPHGG+A 
Sbjct: 480 YDITLNGVEIGGGSIRIHRSDVQKRMFKALGISDEEAQVKFGFLIEALKYGAPPHGGLAL 539

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G DRI+ L+L  K++R+V  FP +Q    +L  +PS V  +QL EL +R V  PKK
Sbjct: 540 GFDRIMTLILKEKSIRDVIAFPKTQKGVCMLTDAPSEVDEKQLNELSIR-VRKPKK 594


>gi|186683614|ref|YP_001866810.1| aspartyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|238691260|sp|B2J116|SYD_NOSP7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|186466066|gb|ACC81867.1| aspartyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 595

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/608 (41%), Positives = 363/608 (59%), Gaps = 31/608 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG+L    +G  V   GWV R R HGG++FLD+RD  GI Q+V++P      +E A
Sbjct: 2   RTHYCGELRKEHIGETVTFYGWVDRRRDHGGVVFLDLRDRSGIVQIVSDPQRTPDSYEQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELP--LPVFGERE 119
            ++R+E+V+ I G V  R  E++N  I TG++E+ A KI++L +V ++LP  + V     
Sbjct: 62  NALRNEYVVEITGRVTQRPEESLNTRIPTGEVEIYADKIKLLNAVGKQLPFQVSVADTET 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRR+ + +N+  R +I+ +MR  +   E FIE  TPILT S+PEGAR
Sbjct: 122 VREDLRLKYRYLDLRRERMAQNLQLRHQIVKAMRRYLEDLEGFIEVETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+++PSRVN G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYVLPSRVNPGEWYALPQSPQLFKQLLMVSGLDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ Q++I+   E+++  +F+    G  +   FLR+ Y + + RYG+DKPD R  + 
Sbjct: 241 MEMSFMSQEEIIELNESLVCHIFKTV-KGIELQRPFLRLTYAEGMERYGSDKPDTRYGLE 299

Query: 299 MHNVTEHFVHSEFRVFS---------KILSVNPGYEVWA-IPAKGGGGNRAFCDRMNEWA 348
           + +V++    S F+VF          KIL +  G +V + +  K GG      D   E A
Sbjct: 300 LVDVSDIVKDSGFKVFRDTVTNGGIVKILPIPNGNDVISNVRIKPGG------DLFKE-A 352

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
              G  GLAYI  R+ + G +  +G +  +L+    + I  R   + G    F AG+   
Sbjct: 353 SEAGAKGLAYI--RVRDDGEIDTIGAIKDNLSEEQKQEILRRTGAKAGHLLLFGAGEAAT 410

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                   R  IA+E  +I+ +     WI DFP +EWN +EK+++  H+PFT P     S
Sbjct: 411 VNKTLDRLRQAIAREFNLIDPDKINLLWITDFPMFEWNADEKRLEALHHPFTAPHPDDLS 470

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
               DL + +A  YDLV NG E+  G +R +  E+  Q F  +G+S E  +++FG L  A
Sbjct: 471 ----DLKTARAQAYDLVLNGVEVGGGSLRIYQREIQQQVFEAIGLSPEEAQSKFGFLLEA 526

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           F+ G PPHGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +PS+V  +QL+EL 
Sbjct: 527 FEYGTPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQARCLLTDAPSSVDAKQLKELH 586

Query: 589 LRIVENPK 596
           +     PK
Sbjct: 587 VASTYKPK 594


>gi|319946029|ref|ZP_08020278.1| aspartate--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319747837|gb|EFW00082.1| aspartate--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 584

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/593 (40%), Positives = 359/593 (60%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVREEHIGQELTLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPETVSSEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  + +N  I TG++E+    + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEYVIEVTGQVAAR--QQVNDKIATGKVEMHVSSLTVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFEMLLTD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKCVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
                +  + A  GPVAK L  V TE +   L +++ D   F+A D L+  +    A R 
Sbjct: 353 -----KVADGALNGPVAKFLTDVTTE-LTSALQLEEKDLVLFVA-DTLEVANATLGALRC 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELDLIDNSQFNFLWVVDWPMFEWSEEEDRYMSAHHPFTLPQAETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E+  + F+ +G SKE    +FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKELQERMFTALGFSKEDATEQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+ +QL EL L++
Sbjct: 526 LALGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVATKQLEELSLQV 578


>gi|281412789|ref|YP_003346868.1| aspartyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281373892|gb|ADA67454.1| aspartyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 579

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 248/596 (41%), Positives = 358/596 (60%), Gaps = 25/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L  +D G  V+L GWV R+R  GG+ F+D+RD YG TQ+V + +S  + +   
Sbjct: 3   RTHTCGELKATDEGKKVKLCGWVDRIRDLGGVRFIDLRDRYGETQIVCDVNSEAYSVVDE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E V+ ++G V  R   T N NI TG+IE+ A++IEILS+A+  PLP +      E +
Sbjct: 63  LTRESVVLVEGTVRKRPEGTENPNIETGEIEVVAERIEILSLAD--PLPFYPGEAPKEEM 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR++DLR + + +NI+ R +I   +R       F+E  TP LT S+PEGARDFLVPS
Sbjct: 121 RLKYRYIDLRSERMKRNIILRYKISKIIRDYFDELGFLEIETPFLTRSTPEGARDFLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D+EMSFV
Sbjct: 181 RLRPGKFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQVDVEMSFV 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +D++N  E ++  VF E S+G  +   F RI YD+A+ +YGTDKPD R  + + +   
Sbjct: 240 DVEDVMNVSEGMVSRVFRE-SSGIDLKVPFDRIPYDEAMEKYGTDKPDRRYGMELRDFGY 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  +EF+V   +L      + + +P      +R   + + E  +  G  GL  I+++LD
Sbjct: 299 AFETTEFKVIRNVLDEGGSVKGFIVPGFASEMSRKKGEELMERMKELGLGGL--IWFKLD 356

Query: 365 ESGNVAGMGPVAKHL-----NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARN 418
             G +    P  KHL      I  TE      +M +GD C   A       + A    R 
Sbjct: 357 --GGIT--SPHLKHLEKEFRKIAETE------NMNEGDVCLIAAHTDRNLLNEALGTLRL 406

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I +E        F+  W++DFP++EW+EEE++    H+PFTMP   +E+L G+D   ++
Sbjct: 407 EIGKEHFSHLAKGFDVLWVVDFPYFEWSEEEERFVARHHPFTMPV--LETL-GDDYTKVR 463

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+  G IR H  ++  + F  +G+S+E  + +FG    AF+ G+PPHGG
Sbjct: 464 AKAYDLVINGYEVGGGSIRIHRRDIQEKIFELLGLSEEEAQKKFGFFLEAFRYGVPPHGG 523

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA G+DR+V ++ G  ++REV  FP + N   LL G+P+ V   QLREL +RI E 
Sbjct: 524 IAFGLDRLVSIIAGESSIREVIAFPKTGNGVCLLTGAPAEVDERQLRELRIRIEEG 579


>gi|91776734|ref|YP_546490.1| aspartyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|123253951|sp|Q1GYN8|SYD_METFK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91710721|gb|ABE50649.1| aspartyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 594

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 367/596 (61%), Gaps = 10/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L    +G  V L GW HR R HGG+IF+D+RD  G+ Q+V +PD+   F+IA+
Sbjct: 2   RTHYCGHLNREHIGQTVTLCGWAHRRRDHGGVIFIDLRDREGMAQIVIDPDTPEAFKIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+VL +   V +R   T+N NI TG++E+ A +IEIL+ +   P  +  +    E 
Sbjct: 62  SVRNEFVLKVVCKVRARPEGTVNLNIPTGEVEMLASEIEILNPSLTPPF-MLDDDNLSEM 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R ++R++DLRR  + KN++ R R+   +R ++ ++ FIE  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLEHRYIDLRRPAMQKNLMLRYRVAKVLRDQLDSQGFIEVETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHHGQFFALPQSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I+  +E ++R +F++  + + + N F RI + +A+ RYG+DKPD+R  + +  +T
Sbjct: 240 LNEEEIMTIVEGMIRTMFKQVQDID-LPNPFPRISFAEAMNRYGSDKPDMRVTLEITELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF+   + + G  V AI    G   +R+  D   E+ +  G  GLAYI   
Sbjct: 299 DVMKDVDFKVFAGAAN-SAGGRVAAIRVPNGAALSRSEIDAYTEFVKIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                N  G+  P+ K+++    +AI  R   Q GD  FF   D  K  + A  A R  I
Sbjct: 358 DASKLNEEGLQSPIVKNIHEPALKAIIERTGAQSGDIVFF-GADKAKIVNEALGALRTKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             E G ++   +   W++DFP +E +EE  +    H+PFT P+ G E L  ++  +  + 
Sbjct: 417 GHEKGHVDGRAWAPLWVVDFPMFEHDEENDRWVALHHPFTSPKDGHEDLLASNPGAALSK 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  EV  + F  + ISKE  + +FG L  A Q G PPHGG+A
Sbjct: 477 AYDMVLNGWEVGGGSVRIHKQEVQSKVFDALKISKEEAQEKFGFLLDALQYGAPPHGGLA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENP 595
            G+DR+V L+ GA+++R+V  FP +Q    L+  +P+ V  +QLREL +R+  +NP
Sbjct: 537 FGLDRLVTLMAGAESIRDVIAFPKTQRAQCLMTKAPNEVDEKQLRELHIRVRQQNP 592


>gi|332981513|ref|YP_004462954.1| aspartyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699191|gb|AEE96132.1| aspartyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 595

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 245/592 (41%), Positives = 364/592 (61%), Gaps = 15/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTH CG L +SDV +   + GWV R R  GG+IF+D+RD  GI QVV N   D+  F+ A
Sbjct: 10  RTHMCGQLRLSDVDTSAVVMGWVQRRRDLGGVIFIDLRDRTGIVQVVFNEIFDADAFDKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++R+E+V+ + G V+ RS +T+N  I TG+IE+ A+++++L  +E  P PV  +    E
Sbjct: 70  QALRNEYVIAVVGDVVRRSEDTVNPKINTGEIEIRARQLKVLGRSETPPFPVEDDINVSE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + +N++ R ++    R  +  E FIE  TP+LT S+PEGARD+LV
Sbjct: 130 ILRLKYRYLDLRRPDMQRNLMLRHKVSKITRDFLSDEGFIEVETPMLTKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ GSFYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRLHPGSFYALPQSPQLFKQLLMISGFDKYFQIARCFRDEDLRADRQP-EFTQIDLEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +D++   E ++  +F++ + G  +S    R+ Y +A+ RYG+DKPD R  + + ++
Sbjct: 249 FVDVEDVIALNEQLIARIFKD-AIGMDISLPLKRLTYKEAMERYGSDKPDTRFGLELKDI 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           ++    S+F+VF+   +V  G  V  I    G     R   D + ++ ++ G  GLA+I 
Sbjct: 308 SDIVRSSQFKVFAD--AVAHGGSVRGINVIDGADKFARRELDALVDFVKTFGAKGLAWIT 365

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
              DE  +     P+ K L+    + I  R+D + GD   F+A  D + F S     R  
Sbjct: 366 ITADELKS-----PITKFLSQDEIDGILGRMDAKAGDLLLFVADKDEVVFDSLGQ-LRLE 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + + L +I+ + ++  W+ +FP  E++EEEK+    H+PFT P     SL  ++    +A
Sbjct: 420 LGKRLNLIDDSRYDLLWVTEFPLLEYSEEEKRYVAKHHPFTSPMDEDISLLNSEPWKARA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G IR H +E+  + F  +G SKE    RFG L +AF+ G PPHGG+
Sbjct: 480 KAYDMVLNGNEIGGGSIRIHSTELQQKMFEVLGFSKEDAWERFGFLLKAFEYGAPPHGGM 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL G   +R+V  FP  QN    L  +P+ V  +QLREL +R+
Sbjct: 540 AYGLDRLVMLLAGLDTIRDVIAFPKVQNASCPLTEAPTPVDEKQLRELHIRV 591


>gi|289167031|ref|YP_003445298.1| aspartyl-tRNA synthetase (aspartate-tRNA ligase) [Streptococcus
           mitis B6]
 gi|288906596|emb|CBJ21429.1| aspartyl-tRNA synthetase (aspartate-tRNA ligase) [Streptococcus
           mitis B6]
          Length = 587

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/596 (40%), Positives = 360/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ N
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQN 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS++ +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKCVDFKVFSEVPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTSIQAE-LTAALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETTHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|315612036|ref|ZP_07886953.1| aspartate--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315838|gb|EFU63873.1| aspartate--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 587

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/596 (40%), Positives = 360/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   LD++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQAE-LTAALDLEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|293375174|ref|ZP_06621461.1| aspartate--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292646211|gb|EFF64234.1| aspartate--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 585

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 235/592 (39%), Positives = 364/592 (61%), Gaps = 16/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61
           RTH+ G+L + +VG  V L GWV + R  GG++F+D+RD YG+TQ+VANP++      E+
Sbjct: 3   RTHNNGELRLENVGQVVELKGWVAKSRNLGGLVFIDLRDRYGMTQLVANPETVSPEVLEV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  VR+E+V+ + G+V  R ++  N N+ TG IE+  +++ I+S AE  PL +  E +  
Sbjct: 63  ANKVRNEYVIAVKGIVAERQSK--NPNMPTGDIEVVLEQLTIISEAEMTPLIIADETDAL 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR  + KN + R  I+ S+R  + +++FIE  TP L  S+PEGARD+L
Sbjct: 121 EDTRLKYRYLDLRRPMMQKNFILRHNILKSVRSYLDSQDFIEVETPYLNKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGF+RY+Q+A CFRDED R+DR P EF Q+D+E 
Sbjct: 181 VPSRVHEGEFYALPQSPQIFKQLLMVSGFERYYQVARCFRDEDLRADRQP-EFTQIDIET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q++I+N +E +L  + ++   G  +   F R+ Y++A+ RYG+DKPD R  + +  
Sbjct: 240 SFLTQEEIMNLVEEMLVKMMKDV-KGLDIPRPFPRLSYEEAMGRYGSDKPDTRFEMELIP 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +     +  F VF+   +V  G EV A+  KG     +R   D++ ++ +     GLA++
Sbjct: 299 LNHVVANCGFSVFAS--TVEAGNEVKALCVKGAAERFSRKDIDKLTDFVKKYKAKGLAWV 356

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+AK  N     +I+   + + GD   F+A             R H
Sbjct: 357 --KVVEEG---FNGPIAKFFNEDEVASIKAATNAEIGDLLLFVADTKAVVADSLGALRLH 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+ + F F W++D+P +E++EE  +   AH+PFTMP          D  + KA
Sbjct: 412 LAKELGLIDESKFNFLWVIDWPLFEYDEEAGRFFAAHHPFTMPSLDTLDTFDTDSHNAKA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G +KE  E +FG L  AF+ G PPHGG+
Sbjct: 472 QAYDIVLNGYELGGGSLRIYRPDIQSRMFEALGFTKEEAEEQFGFLMNAFKYGTPPHGGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRI M+L G++++R+V  FP + +    +  +P  VS  QL EL +++
Sbjct: 532 ALGLDRIAMILTGSQSLRDVIAFPKNASATCPMTEAPGRVSEAQLTELHIQL 583


>gi|322392505|ref|ZP_08065965.1| aspartate--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144497|gb|EFX39898.1| aspartate--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 587

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/596 (40%), Positives = 355/596 (59%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVRAEHIGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEYVIEVTGQVAAR--EQANDKLATGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + KN+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLKNLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQLTKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA+I
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
                +  +    GPVAK L  +  E +   L ++D D   F+A D L   +    A R 
Sbjct: 353 -----KVADGELNGPVAKFLTGIQ-EDLTAALGLEDKDLVLFVA-DTLDVANAILGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E+  + F  +G S E    +FG L  A   G PPHGG
Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKELQERMFKALGFSAEEANAQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G  N+REV  FP +    D +  +PSTVS++QL EL L++ ++
Sbjct: 526 LAIGLDRFVMLLAGEDNIREVIAFPKNNKAIDPMTQAPSTVSLKQLEELNLQVEQD 581


>gi|206601588|gb|EDZ38071.1| Aspartyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 584

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/592 (40%), Positives = 338/592 (57%), Gaps = 16/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEI 61
           YR+HS  DL     GS V L+GWV  VR HGG++F D+RD  G+ QVV NPD+      +
Sbjct: 2   YRSHSTTDLTTLPTGSLVTLAGWVQTVRDHGGLLFFDLRDREGLVQVVVNPDTTPQLVSL 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AKS+R EWV+ + G +  R   T N  + TG +E+  Q++ +L+     P PV    E  
Sbjct: 62  AKSLRDEWVISLHGKIQVRPEGTHNPALPTGSLEVICQEMHVLNTCPTPPFPVDDRIEVS 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R  YR+LD+RR+TL K++  R  + + +R  +    F E  TPILT S+PEGARDFL
Sbjct: 122 ETLRLTYRYLDIRRETLRKSLKLRNDLTHFIRNYLHDHAFWEVETPILTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+ +GSFYALPQ+PQ +KQ+LM  G +RY+QIA CFRDED R+DR P EF Q+D+E 
Sbjct: 182 VPSRLEKGSFYALPQSPQLFKQILMVGGIERYYQIARCFRDEDLRADRQP-EFTQVDIEA 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+  D  L  ME +++ +FE+F+ G      F+R+ Y +A+ +YG+DKPDLR  + + N
Sbjct: 241 SFLTMDQFLYLMEGMIQSIFEKFT-GFRADRPFVRLTYREAMEKYGSDKPDLRFGLPIGN 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E    ++FRVF  +L    G  +      G   +R   D + +W   QG  GLA+   
Sbjct: 300 LSEAAGKTQFRVFRDVLD-QKGVVLGLRYPGGAALSRKEIDELTQWTIDQGAKGLAWF-- 356

Query: 362 RLDESGNVAG---MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                  V G     P+ K         I   L  + GD   FIA         A   R 
Sbjct: 357 ------KVEGETFQSPILKFFPEEAQADIAKVLSPEPGDMLLFIADKGPLARKIAGQLRL 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           HI   L +     +   W++DFP +EWNEEE +++  H+PFT P+     L  +D LS++
Sbjct: 411 HIGDRLKLRRSRDYSLLWVVDFPLFEWNEEENRLEALHHPFTAPRREDIPLLESDPLSVR 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG EI  G +RN    +  + F  +GIS E    RFG L  A   G PPH G
Sbjct: 471 SDAYDLVLNGTEIGGGSVRNFEPHLQERLFEKIGISPESARARFGFLLDALTYGAPPHLG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           +A G+DR VMLL G  ++R+V  FP +Q    LL  +PS+V   QL+ELG+R
Sbjct: 531 MAFGLDRFVMLLAGCDSIRDVIAFPKTQKGSCLLTEAPSSVDAVQLKELGIR 582


>gi|157151663|ref|YP_001451308.1| aspartyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157076457|gb|ABV11140.1| aspartyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 584

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/598 (41%), Positives = 358/598 (59%), Gaps = 23/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61
           R+   G +    VG  + L GWV R R  GG+IF+D+RD  GI Q+V NP++      E 
Sbjct: 3   RSMYAGRVRKEHVGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVSKDVMET 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V++R  E  N  + TG +EL  Q +E+L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVVAR--EQANDKLATGAVELHVQSLEVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  + I   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQADLITA-LGLEDKDMVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELDLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E+  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKELQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G+DR VMLL G +N+REV  FP +    D +  +PS V+ +QL EL L++  N K
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSPVAAKQLDELSLQVEVNEK 583


>gi|116750723|ref|YP_847410.1| aspartyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116699787|gb|ABK18975.1| aspartyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 613

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 241/589 (40%), Positives = 349/589 (59%), Gaps = 10/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           +THSC  LG   VG  V L GWV R R HGG+IF+D+RD  G+TQVV +P  D+   E A
Sbjct: 27  KTHSCNSLGRGHVGETVVLMGWVQRRRDHGGLIFVDLRDREGLTQVVFDPQFDAVAHEHA 86

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+RSE+V+ + G V  R     N  ++TG+IE+  ++++IL+ ++  P  V  + E  E
Sbjct: 87  HSLRSEYVIAVTGTVRPRPEGMTNPRLVTGEIEVITRELKILNSSKTPPFHVEDDVEASE 146

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR +YR++DLRR  +  N++ R R +   R       F+E  TP+LT S+PEGARD+LV
Sbjct: 147 NIRLRYRYIDLRRPRMFHNLLLRHRAVQLTREYFNGAGFLEVETPVLTKSTPEGARDYLV 206

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQ+LM +GF+RY+QI  CFRDED R+DR P EF QLD+EMS
Sbjct: 207 PSRVNPGKFYALPQSPQLFKQILMVAGFERYYQIVKCFRDEDLRADRQP-EFTQLDLEMS 265

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV ++ I   +E+ +R + +E   G  ++  F R+ Y +A+R YGTD+PD R  +++ +V
Sbjct: 266 FVNEEHIYELIESWIRLLMKELL-GVEMAPPFPRMSYAEAMRLYGTDRPDTRFGLLLTDV 324

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+    SE RVF + +  N   +   +P  GGG +R   D + E+ +  G  G+A+I  R
Sbjct: 325 TDIVADSELRVFRQAVERNGIVKALRVPG-GGGLSRKDLDDLTEYVKIFGAQGMAWI--R 381

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           +   G      P+AK L     E +  RL++++GD   F+A           + R  +  
Sbjct: 382 IQPEG---WQSPIAKFLQESVRERLAERLEIENGDIVMFLADQGKVVNDALGNLRVRLGN 438

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +I+   + F W+  FP  EW+ EEK+    H+PFT P      L       +++  Y
Sbjct: 439 QLELIDPGSYNFVWVSHFPLLEWDAEEKRYTAVHHPFTSPIEEDVPLLREHPEQVRSRAY 498

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG EI  G IR H  E+    F  +GI +E    +FG L  A Q G PPHGGIA G
Sbjct: 499 DLVLNGIEIGGGSIRIHRQELQELVFGALGIGREEAAEKFGFLLEALQYGAPPHGGIAFG 558

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR+VMLL G+ ++R+V  FP +Q    L+ G+PS   + QL EL +R+
Sbjct: 559 VDRLVMLLSGSTSIRDVIAFPKTQKATCLMSGAPSEPELRQLLELCVRV 607


>gi|283954077|ref|ZP_06371602.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794356|gb|EFC33100.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 583

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 353/596 (59%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H   DLG+S VG  ++L GWV+  R HGG+IF+D+RD  GI Q+V +P+ +    EIA
Sbjct: 2   RSHYNTDLGISHVGQNIKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKQAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            + R+E+VL ++G++  R    +N  + TG+IE+   K+ I+     +P     +    E
Sbjct: 62  SNARNEFVLIVEGIIRPRGEGLVNPKLKTGEIEVVVSKL-IIENESAVPPFTIADESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  + +  F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRNPKLYENFALRSKACIAARNSLASMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++N  EN L+ +F+  + G  +   F ++ Y DAI  YG+DKPDLR  +   +V
Sbjct: 240 FCEQKDVINVAENFLKDIFK--ACGKEIQTPFRQMRYKDAIENYGSDKPDLRFDLKFIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFAKSNNEIFANIAKDIKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFI- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ E G     GP+ K  +  +   +  R +++ GD  FF AG       +    R  +
Sbjct: 357 -QVKEDG---LKGPLCKFFSEEDLNKLSKRCELEVGDVVFFGAGTKKTVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ N  EF W++DFP +E N ++      H+PFTMP+    ++  NDL  I + 
Sbjct: 413 ANELNLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPK----NIDENDLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I +E    +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQREKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 528 IGLDRLIMLVTGANSIREVIAFPKTQKAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|325842220|ref|ZP_08167637.1| aspartate--tRNA ligase [Turicibacter sp. HGF1]
 gi|325489687|gb|EGC92046.1| aspartate--tRNA ligase [Turicibacter sp. HGF1]
          Length = 585

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 235/592 (39%), Positives = 364/592 (61%), Gaps = 16/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61
           RTH+ G+L + +VG  V L GWV + R  GG++F+D+RD YG+TQ+VANP++      E+
Sbjct: 3   RTHNNGELRLENVGQVVELKGWVAKSRNLGGLVFIDLRDRYGMTQLVANPETVSPEVLEV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  VR+E+V+ + G+V  R ++  N N+ TG IE+  +++ I+S AE  PL +  E +  
Sbjct: 63  ANKVRNEYVIAVKGIVAERQSK--NPNMPTGDIEVVLEQLTIISEAEMTPLIIADETDAL 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR  + KN + R  I+ S+R  + +++FIE  TP L  S+PEGARD+L
Sbjct: 121 EDTRLKYRYLDLRRPMMQKNFILRHNILKSVRSYLDSQDFIEVETPYLNKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGF+RY+Q+A CFRDED R+DR P EF Q+D+E 
Sbjct: 181 VPSRVHEGEFYALPQSPQIFKQLLMVSGFERYYQVARCFRDEDLRADRQP-EFTQIDIET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q++I+N +E +L  + ++   G  +   F R+ Y++A+ RYG+DKPD R  + +  
Sbjct: 240 SFLTQEEIMNLVEEMLVKMMKDV-KGLDIPRPFPRLSYEEAMGRYGSDKPDTRFEMELIP 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +     +  F VF+   +V  G EV A+  KG     +R   D++ ++ +     GLA++
Sbjct: 299 LNHVVANCGFSVFAS--TVEAGNEVKALCVKGAAERFSRKDIDKLTDFVKKYKAKGLAWV 356

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+AK  N     +I+   + + GD   F+A             R H
Sbjct: 357 --KVVEEG---FNGPIAKFFNEDEVASIKAATNAEIGDLLLFVADTKAVVADSLGALRLH 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+ + F F W++D+P +E++EE  +   AH+PFTMP          D  + KA
Sbjct: 412 LAKELGVIDESKFNFLWVIDWPLFEYDEEAGRFFAAHHPFTMPSLDTLDTFDTDSHNAKA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G +KE  E +FG L  AF+ G PPHGG+
Sbjct: 472 QAYDIVLNGYELGGGSLRIYRPDIQSRMFEALGFTKEEAEEQFGFLMNAFKYGTPPHGGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRI M+L G++++R+V  FP + +    +  +P  VS  QL EL +++
Sbjct: 532 ALGLDRIAMILTGSQSLRDVIAFPKNASATCPMTEAPGRVSEAQLTELHIQL 583


>gi|283782453|ref|YP_003373208.1| aspartyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283440906|gb|ADB19348.1| aspartyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 591

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 239/596 (40%), Positives = 350/596 (58%), Gaps = 12/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           RTH+CG+L  + VG  V L GWV + R HGG +F+D+RD YG TQVV  PD+    +  A
Sbjct: 3   RTHTCGELRSTHVGEVVSLCGWVDKSRDHGGTLFIDLRDRYGKTQVVFEPDAGAELYAEA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R E V+ + G V+ R   T NA + TG +EL    +E+L+     P     +    E
Sbjct: 63  SKLRGEDVIKVTGKVIVRPEGTRNAKLSTGDVELQVTALELLNKCNNAPFSPSQQDLPGE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + K +V R+ II +MR       FI+  TPIL  S+PEGARD+LV
Sbjct: 123 DLRLKYRYLDLRRSEMQKTLVLRSSIIKAMRDYFEENQFIDVETPILGRSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFYALPQ+PQ YKQ+LM +G+DRY Q+A CFRDED R+DR P EF QLD+EMS
Sbjct: 183 PSRVHNGSFYALPQSPQLYKQILMVAGYDRYVQVARCFRDEDLRADRQP-EFTQLDLEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV  +D+++ ++ +++ + ++F N + +     R+ +D+A+ R+G D PDLR    + + 
Sbjct: 242 FVTHEDVMSMIDGLMKKLAKQFLNID-LQLPLPRMTWDEAMERFGHDAPDLRYGCELIDC 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           T+     +FRVF +  +   G ++  I A GGG   +R   D + E+ +     GLA+  
Sbjct: 301 TDLAAKCDFRVFKE--TAEQGKKLRGICAPGGGKLYSRKLIDELTEFVKQFEAKGLAW-- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +R+++ G +    P+AK+      E  + R+  + GD  FF+A      C    + R  I
Sbjct: 357 FRVEDDGKL--FSPIAKNFTEAQLEEFKTRMQAKPGDIMFFVADTWAVSCKALHNLRKKI 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +L + +     F W+++FP +E++ EEK+    H+PFT P+     +  +D    +A 
Sbjct: 415 GVDLKLYDPKTMNFSWVVEFPMFEYDAEEKRWVSMHHPFTAPRPQDLHMLDSDPAKSRAV 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E   G IR H  +V  + F  +GI +E  +NRFG L  A Q G PPHGGIA
Sbjct: 475 AYDLVINGSEAGGGTIRIHDWQVQQKVFGLLGIDEETAKNRFGFLLEALQFGAPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIDR+VML     ++REV  FP +Q   DL+  +P+ V  +QLRELG+++    K
Sbjct: 535 LGIDRVVMLFGALDSIREVIAFPKTQKAADLMTEAPNLVDNKQLRELGIKLASADK 590


>gi|229826227|ref|ZP_04452296.1| hypothetical protein GCWU000182_01599 [Abiotrophia defectiva ATCC
           49176]
 gi|229789097|gb|EEP25211.1| hypothetical protein GCWU000182_01599 [Abiotrophia defectiva ATCC
           49176]
          Length = 596

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/592 (41%), Positives = 352/592 (59%), Gaps = 13/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           +RTH C +L   D+G  V + GWV + R  GG+IF+D+RD  GI Q+V       S  FE
Sbjct: 9   HRTHRCTELNKEDIGKTVTVMGWVAKYRNKGGLIFIDLRDRSGILQLVYEEQDCGSEVFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +R+E+V+   G+V  R+A  +N NI TG IE+  ++  ILS +E  P  +  + + 
Sbjct: 69  KAAKLRNEYVIAATGVVTERAA--VNENIPTGHIEIRVKETRILSESETTPFEIVNDLKT 126

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + + ++ +++++  MR  M  E F+E  TPI+  S+PEGARD+
Sbjct: 127 KEELRLKYRYLDLRRPDMQEKLMLKSKVLRLMRDFMADEGFVEVETPIMCNSTPEGARDY 186

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRVNQG FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q DME
Sbjct: 187 LVPSRVNQGCFYALPQSPQVLKQLLMLSGFDRYFQIARCFRDEDLRADRQP-EFTQADME 245

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+L   E +++ + +E + G  +     R+ + DA+  YG+DKPD R  + + 
Sbjct: 246 LSFVDVDDVLEVNERLIKHIMKE-TKGIDIELPLPRMRWQDAMNDYGSDKPDTRFEMKLV 304

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           +V+E      F VF+  L +  G  V  I  KG  G  R   D + + A+  G  GLAY+
Sbjct: 305 DVSEVVKGCGFGVFTSALEMKNG-SVRGINVKGQAGMPRKKIDALVDKAKGFGAKGLAYL 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              ++E G        +K +     + +   +  + GD   F A       +     R  
Sbjct: 364 --AVNEDGTYK--SSFSKFMTEEELDKLVQTMKGEKGDLLLFAADKTALVWNVLGALRLD 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           I +ELG+I+ + F F WI++FP   WNE+E +    H+PFT P          D  SI+A
Sbjct: 420 IGEELGLIDKSKFNFLWIVEFPLLGWNEDENRFQAEHHPFTAPMEEDWENADKDPGSIRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R + ++V  + F  +G +KE   ++FG L  AF+ G+PPH G+
Sbjct: 480 KAYDIVLNGYELGGGSVRIYQNDVQEKMFELLGFTKEEAHSKFGFLLDAFKYGVPPHAGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR VMLL GA+N+REV  FP +++  DL++GSP+TV  +QL ELG+ I
Sbjct: 540 AYGVDRFVMLLAGAENIREVIAFPKNKDAMDLMLGSPNTVDTKQLDELGIMI 591


>gi|39996563|ref|NP_952514.1| aspartyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|62287579|sp|Q74D56|SYD_GEOSL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|39983444|gb|AAR34837.1| aspartyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298505579|gb|ADI84302.1| aspartyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 594

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 241/591 (40%), Positives = 352/591 (59%), Gaps = 12/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H CG L  +DVG  V L GWV R R HGG+IF+D+RD  G+ Q+V +P  A      A
Sbjct: 10  RSHLCGTLTKADVGKQVTLMGWVMRRRDHGGLIFIDLRDREGLAQIVFDPAKAPEAHREA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VR+E+V+ I G V+ R   T+N N+ TG++E+   + ++L+ ++ LP  +    +  E
Sbjct: 70  EAVRNEYVVAIKGEVVPRPEGTVNPNMKTGEVEILVTQCKLLNRSKALPFTLDDYVDVAE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R K+R+LDLRR  L +N++ R+R+    R  +    F+E  TP LT S+PEGARDFLV
Sbjct: 130 NLRLKHRYLDLRRTPLQQNLILRSRVSQVTRQYLTENGFLEIETPFLTKSTPEGARDFLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+NQG+FYALPQ+PQ +KQ+LM SGFDRYFQ+  CFRDED R+DR P EF Q+D E+S
Sbjct: 190 PSRINQGNFYALPQSPQIFKQILMISGFDRYFQVVRCFRDEDLRADRQP-EFTQIDCELS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++DD++  ME ++  +F+E    + V     R+ Y +AIRRYG D PD+R  + +  +
Sbjct: 249 FVDRDDVIAVMEGLIARIFKEAKEID-VQLPIPRMTYAEAIRRYGVDNPDVRFGLELVEL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+    S F+VF+ + +   G  +  + AKG    +R   D + E+ +  G  GLAY+  
Sbjct: 308 TDIVKGSGFKVFADVAA--GGGIIKGLNAKGCARFSRKEIDDLTEFVKIYGAKGLAYVKI 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E G      P+AK         +      ++GD   F+A  P          RN +A
Sbjct: 366 ---EGGE--WHSPIAKFFTAQEIADMNRAFGAEEGDLLLFVADKPKVVNDSLGKLRNQLA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           Q LG+++   F+F WI DFP  EW+EEEK+    H+PFT P         +D  + +A  
Sbjct: 421 QILGLVDKGTFKFVWITDFPLLEWDEEEKRWAAVHHPFTAPMDEDLDKVESDPGACRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H   +    F  +G+S+E    +FG L  A + G PPHGGIA 
Sbjct: 481 YDLVLNGNEIGGGSIRIHQQHIQSLMFRMLGLSEEEARAKFGFLLDALEFGTPPHGGIAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR++MLL G+ ++R+V  FP +Q    L+  +PS V  +QLREL +++ 
Sbjct: 541 GMDRLIMLLTGSDSIRDVIAFPKTQKGACLMSDAPSPVDSKQLRELAIKVT 591


>gi|22298687|ref|NP_681934.1| aspartyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|46577258|sp|Q8DJS8|SYD_THEEB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|22294867|dbj|BAC08696.1| aspartyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 605

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/616 (40%), Positives = 364/616 (59%), Gaps = 27/616 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CGD+ + DVG+ V L GWV R R HGG+IF+D+RD  GI Q+V++P      +  A
Sbjct: 2   RTHYCGDVRLRDVGTTVTLYGWVDRRRDHGGVIFIDLRDRSGIVQIVSDPQRTPDAYPQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYP 121
           + +RSE+V+ + G V  R A+++N  + TG IE+ A  IE+L +V ++LP  +       
Sbjct: 62  ERLRSEYVVKVVGRVSKRPADSVNPKLATGDIEIYADGIEVLNTVRQQLPFAISSTENEE 121

Query: 122 ESIR--FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGAR 178
                  +YR+LDLRR+ + +N+  R R++ +MR  +  E  FIE  TPILT S+PEGAR
Sbjct: 122 VREEVRLRYRYLDLRRERMARNLRLRHRVVQAMRRFLEDEAGFIEVETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G ++ALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGEWFALPQSPQLFKQLLMVAGCDRYYQIAHCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF++Q++IL+  E ++  +F+    G  +   F R+ Y +A+ RYGTDKPD R  + 
Sbjct: 241 MEMSFMDQEEILDLNEALICHIFKTV-KGIELPRPFPRLSYQEAMDRYGTDKPDTRYGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN------EWARSQG 352
           + +V++    S F+VFS  ++     ++  IP    G +R    R+       + A + G
Sbjct: 300 LVDVSDILKDSGFKVFSGAIAQGGVVKILPIP---NGSDRISNVRIKPGGDLFQEATTAG 356

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
             GLAYI  R+  +G +  +G +  +L+      +  R   Q G    F AG+       
Sbjct: 357 AKGLAYI--RVRNNGEIDTIGAIKDNLSPEQKALLLERTGAQPGHLLLFGAGETATVNKT 414

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               R  IA+E  +I+       W++DFP +EWN EEK+++  H+PFT P    E L   
Sbjct: 415 LDRLRQTIAREFNLIDPTATHLLWVVDFPMFEWNAEEKRLEALHHPFTAPHP--EDL--G 470

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DL + +A  YDL+ NG E+  G +R H  E+  Q F  +GI +   + +FG L  AF+ G
Sbjct: 471 DLKTARAQAYDLIFNGHEVGGGSLRIHQPELQRQVFEIIGIDEATAQEKFGFLLEAFEFG 530

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G+DR+VMLL GA ++R+   FP +Q    LL G+PS+V  +QL+EL +   
Sbjct: 531 TPPHGGIAYGLDRLVMLLAGADSIRDTIAFPKTQQARCLLTGAPSSVEPQQLKELHV--- 587

Query: 593 ENPKKILKISVTTILR 608
             P K  K +  T  R
Sbjct: 588 -TPAKPAKTTAKTKPR 602


>gi|262283660|ref|ZP_06061425.1| aspartyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262260717|gb|EEY79418.1| aspartyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 584

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 245/598 (40%), Positives = 357/598 (59%), Gaps = 23/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61
           R+   G +    VG  + L GWV R R  GG+IF+D+RD  GI Q+V NP++      E 
Sbjct: 3   RSMYAGRVRKEHVGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVSKDVMET 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V++R  E  N  + TG +EL  Q +E+L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVVAR--EQANDKLATGAVELHVQSLEVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPV K L  +  + I   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVVKFLTAIQADLITA-LSLEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+   F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNGKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G+DR VMLL G +N+REV  FP +    D +  +PS V+ +QL EL L++  N K
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSPVATKQLDELNLQVEVNEK 583


>gi|223039849|ref|ZP_03610133.1| aspartyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878858|gb|EEF13955.1| aspartyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 583

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 250/596 (41%), Positives = 352/596 (59%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           R+H C DL  +D+G  V L GWV+  R HGG+IFLD+RD  G+ Q+V +P    +  E+A
Sbjct: 2   RSHYCTDLSSADIGKEVTLCGWVNTYRDHGGVIFLDLRDRTGLIQIVCDPADSKSSHEVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL I G V +R    +N  + TG+IE+ A ++ + + +E LP  V G+    E
Sbjct: 62  SHVRDEYVLRIKGKVRARGEGLVNPRLKTGEIEVVADEVIVENPSEPLPF-VIGDESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLDLR + L      R++   + R  +    FIE  TPILT ++PEGARD+LV
Sbjct: 121 DIRLKYRFLDLRNEKLQNIFKMRSKAAIAARNSLDKMGFIEFETPILTRATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVYPGQFYALPQSPQLFKQLLMCSGFDKYFQIAKCFRDEDLRADRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+EQ+DILN  EN+L+ VF   + G  +   F R+ Y +A   YG+DKPDLR  + M++V
Sbjct: 240 FIEQEDILNMAENMLKDVFA--ACGYDIQIPFRRMSYKEATESYGSDKPDLRYDLKMNDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +FSKI S      + A+    G    ++   +R  E+ R  G  GL Y  
Sbjct: 298 IDIFARSSNEIFSKIASEPKKNRIKALKVPNGDNIFSKREMNRFEEFVRKFGAQGLGY-- 355

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +++ E+G     GP+ K     + + I  R +++ GD  FF AG       +    R  +
Sbjct: 356 FQMKENGL---KGPLCKFFEQSDLDEIVERCELKVGDVVFFGAGKKKVVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++GII+ N  EF W++DFP +E N ++      H+PFTMP+    ++   DL  I + 
Sbjct: 413 AEQMGIIDQNKMEFLWVLDFPMFEQN-DDGSYSAMHHPFTMPK----NIDEPDLEDILSV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +D+V NG+E+  G +R H ++V  + F  +GI +     +FG L  A   G PPHGGIA
Sbjct: 468 AHDVVLNGYELGGGSVRIHKNDVQQKVFKLLGIDEAEQREKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G DR+ ML+    ++R+V  FP +Q     L  +PS  S EQLRELGLR+ E  K
Sbjct: 528 IGFDRLNMLVNKTSSIRDVIAFPKTQRAQCPLTKAPSEASGEQLRELGLRLREKEK 583


>gi|251771879|gb|EES52453.1| aspartyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 585

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 238/591 (40%), Positives = 345/591 (58%), Gaps = 11/591 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61
           YR+H   DL  S  G+ V ++GWV  VR HGG++F+++RD  G  Q V  A  +    E 
Sbjct: 2   YRSHPVSDLFTSPPGTPVTIAGWVQTVRDHGGLLFIELRDRSGRIQCVVDAKDNRLLEEA 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK++R EWV+ + G V  R   T+N ++  G  E+   ++ IL+ A+  P PV    E  
Sbjct: 62  AKTLRDEWVISLHGTVGMRPEGTVNVSVAGGDREVRVTQLTILNSAKTPPFPVGTSEEVS 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           ES+R  YR+LD+R   L + +  R+ +   +R  M +  F E  TP+LT S+PEGARDFL
Sbjct: 122 ESLRLTYRYLDMRSPRLLEALRFRSELTALIRNHMTSHQFWEIETPLLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+ +GSFYALPQ+PQ +KQLLM  G +RYFQIA CFRDED R+DR P EF Q+D+E 
Sbjct: 182 VPSRLEKGSFYALPQSPQLFKQLLMVGGLERYFQIARCFRDEDLRADRQP-EFTQVDIEA 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ +D  L  +E +   +F++F  G T+S  F+R+ YD+A+ RYG+DKPDLR  + + +
Sbjct: 241 SFLTRDKFLGIIEELFCDIFKKF-RGETLSRPFMRLTYDEAMNRYGSDKPDLRYDLPIVD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +T+   +++F VF+  ++   G  V  I   GG   +R   + +  WA  QG  GLA   
Sbjct: 300 LTDLARNTQFSVFTNAVAAEEGT-VRGIRYPGGAALSRKEIEDLTAWAMGQGAKGLA--- 355

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E+  +A   P+ K +     + +R R++ Q GD   FIA             R H+
Sbjct: 356 WIKSEAEGLA--SPILKFIPEEVQKGVRERMEAQPGDLLLFIADTKKTALRILGALRQHV 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G+I+ +     W++DFP  EWN +EK+ +  H+PFT P      +        ++ 
Sbjct: 414 AERAGLIDRSKTSLFWVVDFPLLEWNPDEKRYEAIHHPFTAPHPDDLGILSEAPEKTRSL 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IRNH  E+  + F  +G+S+E    RFG L  A   G PPHGG+A
Sbjct: 474 AYDLVLNGTEVGGGSIRNHELELQRRIFDLIGLSEEEATRRFGFLLEALSFGAPPHGGMA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+ M+LLG  ++REV  FP +Q    LL  +P+ V   QLRELG+R+
Sbjct: 534 IGLDRLAMILLGRDSIREVMAFPKTQKGSCLLTEAPAPVDGVQLRELGIRL 584


>gi|91203210|emb|CAJ72849.1| strongly similar to aspartyl-tRNA ligase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 587

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/590 (41%), Positives = 352/590 (59%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT +CG L + +V S V L GWV  VR HGG+IF+D+RD  GITQVV NPD+A    E+A
Sbjct: 6   RTCTCGQLRLKEVDSTVVLMGWVDSVRDHGGVIFIDLRDREGITQVVFNPDTANKSCELA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+V+ I G V +R A T+N ++ TG+IE+ A ++EI + +E  P  +        
Sbjct: 66  HQLRSEYVIAIKGKVAARPAGTVNPDLATGEIEVLADELEIFNKSETPPFEIIDNSNVSL 125

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +  +++ R ++  ++R       FI+  TP+LT S+PEGARD+LV
Sbjct: 126 ELRLKYRYLDLRRSEMQTHLIFRHKVCQTIREYFNTRGFIDIETPVLTKSTPEGARDYLV 185

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G  YALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+ R P EF Q+DMEMS
Sbjct: 186 PSRVNHGKVYALPQSPQLFKQVLMVSGFDRYFQIVRCFRDEDLRAQRQP-EFTQIDMEMS 244

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++ DI+  +E ++  +FE+   G  V+  F R+ Y +++  YG D PDLR  + +H+V
Sbjct: 245 FVDEADIIQVIEGLIAAIFEKVV-GKPVNLPFPRLLYQESMASYGCDAPDLRFGMRIHDV 303

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           +     S F+VF  + ++N G +V AI A G G  +R   D + E+    G  GLA+  +
Sbjct: 304 SHIVKESNFKVF--LETINSGGQVRAINAAGCGHYSRKDIDGLTEFVSQFGARGLAW--F 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +++E+G V+    + K       + I+  ++ + GD   F+A          A  R H+ 
Sbjct: 360 KVEETGLVSS---ITKFFPPEILQKIQQHMNAKAGDLLLFVADKEKVVSQSLAHLRTHLG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +  +IN   F F WI+DFP +E+NE+ K+    H+PFT P+           L ++A  
Sbjct: 417 HKNNLINAEEFNFVWIVDFPLFEYNEDAKRYVALHHPFTSPRSEDIPFLEEKPLEVRARA 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR H  E+  + F  +GI+      +FG L  A + G PPHGGIA 
Sbjct: 477 YDLVLNGVELGGGSIRIHSPEIQKRVFRLLGINDNDAYQKFGFLLDALKFGAPPHGGIAL 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIDR++ LLL   ++REV  FP +Q     +  +PS    +QL+ELG+ +
Sbjct: 537 GIDRMIALLLHLDDIREVIAFPKTQKATCPMTEAPSEADPQQLKELGISL 586


>gi|298493063|ref|YP_003723240.1| aspartyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298234981|gb|ADI66117.1| aspartyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 618

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 250/608 (41%), Positives = 366/608 (60%), Gaps = 31/608 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG+L    +G  V L GWV R R HGG+IFLD+RD  GI Q+V++P      +E A
Sbjct: 25  RTHYCGELRKEHIGETVTLYGWVDRRRDHGGVIFLDLRDRSGIVQIVSDPQRTRESYEAA 84

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGE--RE 119
            ++R+E+V+ I G V  R AE++N  I TG++E+ A KIE+L +V ++LP  V       
Sbjct: 85  NAIRNEYVVEITGRVTQRPAESLNPRIPTGELEIYADKIELLNAVRKQLPFQVSTADIET 144

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRR+ + +N+  R +++ +MR  +   E FIE  TP+LT S+PEGAR
Sbjct: 145 VREDLRLKYRYLDLRRERMAQNMQLRHQVVKAMRRYLEDTEGFIEIETPVLTRSTPEGAR 204

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+++PSRVN+G ++ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 205 DYILPSRVNEGEWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 263

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +++I+   E ++  +F+     + + + F R+ Y +A+ +YG+DKPD R  + 
Sbjct: 264 MEMSFMSENEIIELNEKLVCHIFKTVREID-LPHPFPRLTYKEAMDKYGSDKPDTRYGLQ 322

Query: 299 MHNVTEHFVHSEFRVFS---------KILSVNPGYEVWA-IPAKGGGGNRAFCDRMNEWA 348
           + +V++    S F+VF+         KIL +  G +V + +  K GG      D   E A
Sbjct: 323 LVDVSDVLKDSRFKVFNDAISKGGIVKILPIPNGNDVISNVRIKPGG------DIFREAA 376

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
            + G  GLAYI  R+ E+G +  +G +  +L     E I  R   + G    F A D   
Sbjct: 377 EA-GAKGLAYI--RIRENGEIDTIGAIKDNLTPEQKEEIITRTGAKAGHLLLFAAADTGT 433

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                   R  +A+E  +I  +   F WI +FP +EWN E+K ++  H+PFT P    + 
Sbjct: 434 VNKTLDRIRQFVAREFNLIPPDKINFLWITEFPMFEWNAEQKGLEALHHPFTAPHP--DD 491

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           L+  DL + +A  YDLV NGFE+  G +R +  E+  Q F  +G+S E  +N+FG L  A
Sbjct: 492 LQ--DLKTARAQAYDLVFNGFEVGGGSLRIYKREIQEQVFEAIGLSTEEAQNKFGFLLEA 549

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           F+ G PPHGGIA G+DR+VMLL   +++R+V  FP +Q    LL  +PS V  +QL+EL 
Sbjct: 550 FEYGTPPHGGIAYGVDRLVMLLAEEESIRDVIAFPKTQQARCLLTDAPSAVDTKQLKELH 609

Query: 589 LRIVENPK 596
           +     PK
Sbjct: 610 VASTFKPK 617


>gi|242277624|ref|YP_002989753.1| aspartyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242120518|gb|ACS78214.1| aspartyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 607

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/597 (41%), Positives = 350/597 (58%), Gaps = 23/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTHSC ++  +++G  V + GWV   R HGG+IF+D+RD  G+TQVV +P+  +   E A
Sbjct: 24  RTHSCNEITAANMGEKVLIMGWVQFRRDHGGLIFIDLRDREGLTQVVFSPEHNADAHERA 83

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++RSE+V+ I G V  R     N N+ TG+IE+   + ++L+ +E  P  +    +  E
Sbjct: 84  HAIRSEYVVAIKGEVRERPDGMRNTNLTTGEIEIVVDEWKLLNTSETPPFAIEDRSDASE 143

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLRR  L KN + R +   S+R  +    F+E  TP+LT S+PEGARDFLV
Sbjct: 144 MLRLKYRFLDLRRPVLAKNFILRNKAAQSVRRYLDNLGFLEIETPVLTKSTPEGARDFLV 203

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQ+LM SG DRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 204 PSRMNNGDFYALPQSPQLFKQMLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 262

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV ++ ++   E ++R VF+E +    +  +F R+ Y DA+R YG DKPD+R  + +   
Sbjct: 263 FVNEEQVMGMAEEMVRTVFKE-TIETELPASFPRMTYADAMRDYGCDKPDVRFDLKLQEA 321

Query: 303 TEHFVHSEFRVFS-----KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           T+ F  S+F+VF+     KIL V  G E+          +R   D   ++    G  GLA
Sbjct: 322 TDIFKGSDFKVFASSELIKILRVPNGAEL----------SRKEIDEYTKFVEIYGSKGLA 371

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +I  ++ E G      P+ K  +      +R   + Q GD  FF AG      +  A  R
Sbjct: 372 WI--KVKEDGE--WQSPIVKFFSEEECAKLRELTNCQPGDILFFQAGAADIVNAALAALR 427

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + +   +I+ + F   W+ DFP  E+N +EK+    H+PFT PQ G     G+     
Sbjct: 428 IKLGERFELIDESKFAPLWVTDFPLLEYNADEKRYVARHHPFTSPQEGQIDELGDKPAEA 487

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YDLV NG+E+  G IR H  E+  + F+ +GI +E    +FG L  A Q G PPHG
Sbjct: 488 LARAYDLVMNGYEVGGGSIRIHTPEMQQKMFAALGIDEEEARAKFGFLMDALQFGAPPHG 547

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           GIA G+DR++M+L GAK++R+V  FP +Q    L+  +PS VS  QLRELG+R+ E 
Sbjct: 548 GIAFGLDRLIMILCGAKSIRDVIAFPKTQKATCLMTEAPSGVSSTQLRELGVRLREK 604


>gi|158337540|ref|YP_001518715.1| aspartyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|189082084|sp|B0CF01|SYD_ACAM1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|158307781|gb|ABW29398.1| aspartyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 595

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/604 (40%), Positives = 369/604 (61%), Gaps = 23/604 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH C +L    VG  V L GWV R R HGG+IFLD+RD  G+ Q+V++P+     +  A
Sbjct: 2   RTHYCSELRNDHVGERVTLCGWVDRRRDHGGVIFLDVRDRTGLIQIVSDPERTPEAYPQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGE--RE 119
            ++R+E+V+ I G V  R  +++N  + TG++E+ A +IE+L +V ++LP  V       
Sbjct: 62  DALRNEYVVRIHGEVSRRPDDSLNPRLPTGEVEIYADQIELLNAVHQQLPFQVSTADVES 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRRD +H+NI+ R R+I S+R  +   +NF++  TP+LT S+PEGAR
Sbjct: 122 VKEELRLKYRYLDLRRDRMHQNIMMRHRLIQSIRRYLEDQQNFVDIETPVLTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR N G ++ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRANPGEWFALPQSPQIFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ Q++I+   E+++R VF+   + + +   F ++ Y +A+ R+GTD+PD R  + 
Sbjct: 241 MEMSFMSQEEIIQLNEDLMRHVFKTLKDID-LPKTFPQMTYAEAMERFGTDRPDTRFDLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN------RAFCDRMNEWARSQG 352
           + NV++    S F+VFS   ++  G +V  +P   G         +   D  +E A + G
Sbjct: 300 LVNVSDLLEDSGFKVFSG--AIKKGGQVKVLPIPDGNAKISNVRIKPGGDLFSE-ASAGG 356

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
             GLAYI  R+ + G +  +G +  +L+   T  +  R   + G    F AG      + 
Sbjct: 357 AKGLAYI--RVKDDGAIDTIGAIKDNLSPEQTAELLERTGAKPGHLLLFGAGPTEIVNAS 414

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
            +  R  +  E+ +I+ +  +  WI +FP +EWN +EK+++  H+PFT P    E+    
Sbjct: 415 LSRLRLALGAEMKLIDPDQIDLLWITEFPMFEWNADEKRLEALHHPFTAPYPEDEA---- 470

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DL + +A  YDLV NG EI  G +R + +++  + F  +G+S+E  +++FG L  AF  G
Sbjct: 471 DLKTARAQAYDLVYNGLEIGGGSLRIYQADLQRRVFDAIGLSEEEAQDKFGFLLNAFNFG 530

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA GIDR+ MLL G +++R+   FP +Q    LL  +PS+V  +QL+EL ++  
Sbjct: 531 APPHGGIAYGIDRLAMLLSGEESIRDTIAFPKTQQARCLLTQAPSSVDQKQLKELQIKST 590

Query: 593 ENPK 596
             PK
Sbjct: 591 AEPK 594


>gi|16330502|ref|NP_441230.1| aspartyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2500971|sp|P73851|SYD_SYNY3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|1652993|dbj|BAA17910.1| aspartyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 599

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/606 (40%), Positives = 363/606 (59%), Gaps = 27/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RTH CGDL  + +G  V L GWV R R HGG+IFLD+RD  GI Q+ ++PD   A + +A
Sbjct: 2   RTHYCGDLRTTHLGETVTLYGWVDRRRDHGGVIFLDLRDRQGIVQIASSPDQTPASYPVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGER--E 119
           + +R+E+V+ + G+V  R  E++N  I TG+IE+ A  I +L+ V ++LP  V      +
Sbjct: 62  EGLRNEYVVQVTGVVSKRPPESLNEKIPTGEIEIYADSIILLNGVNQQLPFVVSSHEAEQ 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGA 177
             E +R KYR+LDLRR  L +N+  R +++ +MR R +   ENF+E  TPILT S+PEGA
Sbjct: 122 VREDVRLKYRYLDLRRARLSQNLQLRHQVVKAMR-RFLEDQENFLEIETPILTRSTPEGA 180

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRVN G +YALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QL
Sbjct: 181 RDYLVPSRVNPGEWYALPQSPQLFKQLLMVAGMDRYYQIARCFRDEDLRADRQP-EFTQL 239

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF+ Q++IL+  E ++  +F+   N + +   F R+ Y +++ +YG D+PD R  +
Sbjct: 240 DMEMSFMGQEEILDLNEALICHIFKVVKNID-LPRPFPRLTYQESMAKYGNDRPDTRFGL 298

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARS 350
            + +V++   ++ F+VFS  +S     +   +P    GGN    +        + + A  
Sbjct: 299 ELVDVSDLLGNTGFKVFSAAVSSGGSIKAIRVP----GGNETISNVRIKPGGDLFKEATE 354

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
            G  G+AYI  R+ ++G +  +G + ++L+    + +      + GD   F AGD     
Sbjct: 355 AGAKGIAYI--RVRDNGEIDTIGAIKENLDEAQVKTLLQLTQAEAGDLLLFGAGDTATVD 412

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
              +  R  + ++LG+I+ +     WI DFP +EWN +EK+ +  H+PFT P        
Sbjct: 413 KSLSRLRLVLGEQLGLIDPDAINLLWITDFPMFEWNSDEKRFEALHHPFTAPHPD----D 468

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             DL + +A  YDLV NG EI  G +R +  EV  + F+ +G+S E    +FG L  AF+
Sbjct: 469 LGDLKTARAQAYDLVMNGVEIGGGSLRIYQREVQEKVFATIGLSPEEAHEKFGFLLDAFE 528

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR+VMLL    ++R+V  FP +Q    LL  +P+ V  +QL+EL + 
Sbjct: 529 YGTPPHGGIAYGLDRLVMLLAKEDSIRDVIAFPKTQQASCLLTEAPAAVDKKQLKELSVA 588

Query: 591 IVENPK 596
               PK
Sbjct: 589 STYVPK 594


>gi|254000153|ref|YP_003052216.1| aspartyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253986832|gb|ACT51689.1| aspartyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 594

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 236/593 (39%), Positives = 364/593 (61%), Gaps = 13/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L    +G  V L GW HR R HGG+IF+D+RD  G+ Q+V +PD+   F++A+
Sbjct: 2   RTHYCGHLNREHIGQTVTLCGWAHRRRDHGGVIFIDLRDREGMAQIVIDPDTPEAFKLAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +VRSE+VL +   V +R   T+NANI TG++E+ A +IEIL+ +   P  +  +    E 
Sbjct: 62  TVRSEFVLKVVCKVRARPEGTVNANIPTGEVEMLATEIEILNPSLTPPF-MLDDDNLSEM 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R ++R++DLRR  + KN++ R R+  ++R  + +  FIE  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLEHRYIDLRRPAMQKNMMLRYRVAKTLRDHLDSNGFIEVETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHHGQFFALPQSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I+N +E+++R +F+   + + +   F R+ + +A+ +YG+DKPD+R  + +  +T
Sbjct: 240 LGEEEIMNIVEDMIRKMFKSVQDID-LPAQFPRMPFSEAMNKYGSDKPDMRVTLEITELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359
           +     +F+VF+   ++  G         G   +R+  D   E+ +  G  GLAYI    
Sbjct: 299 DIMKDVDFKVFAGAANMVGGRVAAMRVPNGAAISRSEIDAYTEFVKIYGAKGLAYIKIND 358

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
             +L+E G      P+ K++++   +AI  R   Q+GD  FF   D  K  + A  A R 
Sbjct: 359 ITKLNEEGL---QSPIVKNIHVNALQAIIDRTGAQNGDIVFF-GADKAKVVNEALGALRT 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  E G ++   +   W++DFP +E +EE  +    H+PFT P+ G E L   +  +  
Sbjct: 415 KVGHEKGHVDGRAWAPLWVVDFPMFEHDEEADRWVALHHPFTSPKDGHEDLLTTNPGAAL 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG+E+  G +R H  EV  + F  + ISKE  + +FG L  A Q G PPHGG
Sbjct: 475 SKAYDMVLNGWEVGGGSVRIHKQEVQSKVFDALKISKEEAQEKFGFLLDALQYGAPPHGG 534

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR+V L+ GA+++R+V  FP +Q    L+  +P+ V  +QLREL +R+
Sbjct: 535 LAFGLDRLVTLMAGAESIRDVIAFPKTQRAQCLMTNAPNEVDEKQLRELHIRV 587


>gi|330959262|gb|EGH59522.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 590

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 2   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 62  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +     + F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 241 LNEEDIIGLTEKMVRQLFKEVLDLEF--DEFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   G     R+  D   ++    G  GLAYI   
Sbjct: 299 DQLTGVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K +   N   I  R+   DGD  FF A D  K  S A  A R  I 
Sbjct: 358 ERAKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGA-DKFKIVSEALGALRIKIG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L +  C  +   W++DFP +E N E+      H+PFT P+   E L+ N   ++ +  
Sbjct: 417 NDLKLHTCE-WAPMWVVDFPMFEEN-EDGSFTALHHPFTAPKCTPEELEANPATAL-SRA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A 
Sbjct: 474 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 534 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 588


>gi|149011973|ref|ZP_01833121.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147763928|gb|EDK70861.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
          Length = 587

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/596 (40%), Positives = 360/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEKEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVVNATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ G       DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEGTAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|148984412|ref|ZP_01817700.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|148998089|ref|ZP_01825602.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168575984|ref|ZP_02721889.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|194398266|ref|YP_002038702.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|307068730|ref|YP_003877696.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|238690808|sp|B5E3C1|SYD_STRP4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|147756099|gb|EDK63142.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|147923189|gb|EDK74303.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|183578094|gb|EDT98622.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|194357933|gb|ACF56381.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|301800860|emb|CBW33517.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
 gi|306410267|gb|ADM85694.1| Aspartyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 587

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/596 (40%), Positives = 360/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+ L+V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEALAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|225857687|ref|YP_002739198.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|254781757|sp|C1CN60|SYD_STRZP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225726232|gb|ACO22084.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 587

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/596 (40%), Positives = 360/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRNLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEKEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVVNATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ G       DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEGTAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|149002950|ref|ZP_01827861.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|149023814|ref|ZP_01836275.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|237649537|ref|ZP_04523789.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237822669|ref|ZP_04598514.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|147758953|gb|EDK65948.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147929610|gb|EDK80603.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 587

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/596 (40%), Positives = 360/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+ L+V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEALAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|126660983|ref|ZP_01732070.1| aspartyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126617723|gb|EAZ88505.1| aspartyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 598

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 250/609 (41%), Positives = 361/609 (59%), Gaps = 33/609 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH C  +   D+   V L GWV R R HGG+IF+D+RD  GI Q+V++P      + IA
Sbjct: 2   RTHYCNHVSAIDIDKTVTLFGWVDRRRDHGGVIFIDLRDRTGIVQIVSDPQRTPTSYPIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119
           +++R+E+V+ I G V  R  E++N  I TG++E+ A+ IE+L+ V ++LP  V       
Sbjct: 62  ETLRNEYVVKIIGQVSKRPPESLNPKIPTGEVEIYAESIELLNGVNKQLPFVVSSLEAES 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178
             E  R KYR+LDLRRD + KN+  R  ++ ++R  +  E  F+E  TPILT S+PEGAR
Sbjct: 122 VKEETRLKYRYLDLRRDRMAKNLQLRHAVVKAIRRYLEDEQGFMEIETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGQWYALPQSPQLFKQLLMVSGCDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +D+IL   E ++  +F+   N + +S  F R+ Y DA+ +YGTD+PD R  + 
Sbjct: 241 MEMSFMSEDEILELNEGLVCSIFKTVKNID-LSRPFPRLTYQDAMDKYGTDRPDTRFDLT 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-----------GGNRAFCDRMNEW 347
           + +V++    S F+VFS   +V  G +V  +P  GG           GG+      + + 
Sbjct: 300 LVDVSDIVKDSGFKVFSG--AVKNGGKVKVLPIPGGNDVISNVQIKPGGD------LFKE 351

Query: 348 ARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407
           A   G  G+AYI  R+ E+  +  +G +  +L       +  R   + G    F AGD  
Sbjct: 352 ATDAGAKGIAYI--RVKENNKLDTIGAIKDNLTEEQKAELLARTGAKPGYLLLFGAGDTD 409

Query: 408 KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
                 +  R  I Q + +I+ +     WI +FP +EWN +EK+++  H+PFT P   + 
Sbjct: 410 TVNKSLSRLRLVIGQRMNLIDPDKINLLWITEFPMFEWNADEKRLEALHHPFTAP--NLA 467

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
            L  NDL + +A  YDLV NG EI  G +R +  E+  + F  +G+S E   N+FG L  
Sbjct: 468 DL--NDLATARAQAYDLVYNGVEIGGGSLRIYQKEIQEKVFETIGLSLEEAYNKFGFLLE 525

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPHGGIA G+DR+VMLL G  ++R+V  FP +Q    LL  +P++V  +QL+EL
Sbjct: 526 AFEYGTPPHGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQASCLLTEAPASVDSKQLKEL 585

Query: 588 GLRIVENPK 596
            ++    PK
Sbjct: 586 QVKSTYKPK 594


>gi|124515285|gb|EAY56795.1| Aspartyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 584

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/594 (40%), Positives = 339/594 (57%), Gaps = 16/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEI 61
           YR+HS  DL     GS V L+GWV  VR HGG++F D+RD  G+ QVV NPD+      +
Sbjct: 2   YRSHSTTDLTTLPTGSLVTLAGWVQTVRDHGGLLFFDLRDREGLVQVVVNPDTTPQLASL 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AKS+R EWV+ + G +  R   T N  + TG +E+  Q++ +L+     P P+    E  
Sbjct: 62  AKSLRDEWVISLHGKIQVRPEGTHNPALPTGSLEVICQEMHVLNTCPTPPFPIDDRIEVS 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R  YR+LD+RR+TL K++  R  + + +R  +    F E  TPILT S+PEGARDFL
Sbjct: 122 ETLRLTYRYLDIRRETLRKSLKLRNDLTHFIRNYLHDHAFWEVETPILTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+ +GSFYALPQ+PQ +KQ+LM  G +RY+QIA CFRDED R+DR P EF Q+D+E 
Sbjct: 182 VPSRLEKGSFYALPQSPQLFKQILMVGGIERYYQIARCFRDEDLRADRQP-EFTQVDIEA 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+  D  L  ME +++ +FE+F+ G      F+R+ Y +A+ +YG+DKPDLR  + + N
Sbjct: 241 SFLTMDQFLYLMEGMIQSIFEKFT-GFRPDRPFVRLTYHEAMEKYGSDKPDLRFGLPIGN 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E    ++FRVF  +L    G  +      G   +R   D + +W   QG  GLA+   
Sbjct: 300 LSEAAGKTQFRVFLDVLD-QKGVVLGLRYPGGAALSRKEIDELTQWTVDQGAKGLAWF-- 356

Query: 362 RLDESGNVAG---MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                  V G     P+ K         I   L  + GD   FIA         A   R 
Sbjct: 357 ------KVEGETFQSPILKFFPEEAQADIAKVLSPEPGDMLLFIADKGPLARKIAGQLRL 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           HI   L +     +   W++DFP +EWNEEE +++  H+PFT P+     L  +D LS++
Sbjct: 411 HIGDRLKLRRPQDYSLLWVVDFPLFEWNEEENRLEALHHPFTAPRREDIPLLESDPLSVR 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG EI  G +RN    +  + F  +GIS E    RFG L  A   G PPH G
Sbjct: 471 SDAYDLVLNGTEIGGGSVRNFEPHLQERLFEKIGISPESARARFGFLLDALTYGAPPHLG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +A G+DR VMLL G  ++R+V  FP +Q    LL  +PS+V   QL+ELG+R V
Sbjct: 531 MAFGLDRFVMLLAGCDSIRDVIAFPKTQKGSCLLTEAPSSVDAVQLKELGIRPV 584


>gi|15613815|ref|NP_242118.1| aspartyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|20139936|sp|Q9KDG1|SYD_BACHD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|10173868|dbj|BAB04971.1| aspartyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 595

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/600 (40%), Positives = 355/600 (59%), Gaps = 16/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG L    V   V+L GWV R R  G +IF+D+RD  G+ Q+V N D      E A
Sbjct: 4   RTHHCGQLSEEQVNERVQLKGWVQRRRDLGQVIFVDLRDRSGVVQLVFNSDISQEALETA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+VL ++G+V+ R   T+N  I TG IE+  +++ IL+ A+ LP  +    +  E
Sbjct: 64  EKVRNEYVLDVEGVVLKRDPSTVNDKIATGTIEVHVERLTILNKAKSLPFQIEANTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + + +  R +    +R  +  + F E  TP+LT S+PEGARD+LV
Sbjct: 124 DIRLKYRYLDLRRPDMQETMKLRHQTTKLIRDFLDGQEFFEIETPMLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SGF+RY+QI  CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHHGEFYALPQSPQIFKQLLMVSGFERYYQIVRCFRDEDLRADRQP-EFTQIDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++D+L   EN++  + +E   G  V+  F R+ YDDA+ RYG+DKPD R  + +  +
Sbjct: 243 FMDKEDLLTMTENMMAKIMKEV-KGLDVALPFPRMTYDDAMNRYGSDKPDTRFEMELIEL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++    S+F+VFS   ++  G  V  +  KGG G  +R   D + E+ +  G  GLA   
Sbjct: 302 SDIVKDSDFKVFSS--AIKSGGIVKGLNLKGGAGSLSRKEIDGLAEFVKPYGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419
           W   E G +   GP+AK         ++  +  +DGD  FF A    + F S  A  R  
Sbjct: 357 WLKVEEGELK--GPIAKFFAGETGAELQQAMGAEDGDLLFFAADKKEVVFDSLGA-LRLK 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + ++  +I+ + F F W++DFP  E++EE K+    H+PFT P+    +    D  S++A
Sbjct: 414 LGKDFNLIDESKFNFLWVVDFPLVEYDEEAKRFVALHHPFTSPKQEDLTKLETDPASVRA 473

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+E+  G  R +   V  + F+ +G ++E  +  FG L  AF+ G PPHGGI
Sbjct: 474 DAYDLVLNGYELGGGSQRIYQRPVQEKMFAALGFTEEAAQKEFGFLLEAFEYGTPPHGGI 533

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV-ENPKKI 598
           A G+DR+VMLL G  N+R+   FP + +   LL  +P  VS+EQL +L L I+   P K+
Sbjct: 534 ALGLDRLVMLLAGRLNLRDTIAFPKTASASCLLTEAPGEVSLEQLLDLNLSIIGHKPDKV 593


>gi|113475986|ref|YP_722047.1| aspartyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|123056664|sp|Q112K0|SYD_TRIEI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110167034|gb|ABG51574.1| aspartyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 595

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/605 (40%), Positives = 368/605 (60%), Gaps = 25/605 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG +  +++   V L GWV R R HGG+IFLD+RD  G+ Q+V++P+     ++IA
Sbjct: 2   RTHYCGQVNSNNIEETVNLCGWVDRRRDHGGVIFLDLRDRSGLIQIVSDPERTPDSYQIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV-FGERE- 119
             +R+E+V+ I G V  R  E++N  + TG+IE+ A  I++L+ + ++LP  V   E E 
Sbjct: 62  GDIRNEYVVQITGRVSRRPEESLNPKLPTGEIEIYADDIQLLNGLGKQLPFQVSTAETEA 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRR+ + +N++ R  +I ++R  +  E NF+E  TPILT S+PEGAR
Sbjct: 122 VREELRLKYRYLDLRRERMTRNLLLRHEVIKAIRRFLEDEQNFVEIETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV+ G ++ALPQ+PQ +KQ+LM SGFDRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVHPGEWFALPQSPQLFKQILMVSGFDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ Q++IL   E ++  +F++   G  +   F R+ Y +A+ RYG+DKPD+R  + 
Sbjct: 241 MEMSFMSQEEILQLNEKLVAYIFQKV-KGIDLPLPFPRLTYTEAMERYGSDKPDVRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARSQ 351
           + +V++    S F+VFS  ++     +V  IP    GGN A  +        + + A   
Sbjct: 300 LVDVSDLMKDSGFKVFSGAIAKGGIVKVLPIP----GGNDAISNVRIKPGGDLFKEASEV 355

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLAY+  R+ E G +  +G +  +L     + +  R + Q G    F A D      
Sbjct: 356 GAKGLAYV--RVKEGGKIDTIGAIKDNLTDEQKQELLKRTNAQPGHLLLFAADDANTVNK 413

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
                R  I ++LG+I+ +     W+ DFP +EWNE+E++++  H+PFT P         
Sbjct: 414 TLDRLRLVIGEQLGLIDQDKISLLWVTDFPMFEWNEDEQRLEALHHPFTAPHPD----DI 469

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           NDL + +A  YDLV NG+E+  G +R +  +V  + F  +G+S +  +N+FG L  AF+ 
Sbjct: 470 NDLKTARAQAYDLVFNGYEVGGGSLRIYQRDVQEKVFEAIGLSAQEADNKFGFLLEAFEY 529

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR+VMLL   +++R+V  FP +Q    LL  +PS V  +QL+EL +  
Sbjct: 530 GTPPHGGIAYGLDRLVMLLAVEESIRDVIAFPKTQQAKCLLANAPSEVDKKQLKELHVSS 589

Query: 592 VENPK 596
           +   K
Sbjct: 590 ISKAK 594


>gi|218282369|ref|ZP_03488651.1| hypothetical protein EUBIFOR_01233 [Eubacterium biforme DSM 3989]
 gi|218216655|gb|EEC90193.1| hypothetical protein EUBIFOR_01233 [Eubacterium biforme DSM 3989]
          Length = 578

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/589 (41%), Positives = 356/589 (60%), Gaps = 18/589 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH+ G+L + DV S V L GWV + R  G ++F+D+RD YGITQ+V N D A  +I+ 
Sbjct: 2   YRTHNNGELRLQDVNSEVTLCGWVSKRRNFGALVFIDLRDRYGITQLVFNEDIAA-QIS- 59

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+VL + G V+ R  +  N  + TG+IE+   +++I++ A   P+ +  E +  E 
Sbjct: 60  DVRNEYVLQVKGTVVERKDK--NPKLETGEIEVVVSEVKIVNTAITTPMIIADETDALED 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  L KN++ R RI   +R  +    F E  TPIL  S+PEGARD+LVP
Sbjct: 118 TRLKYRYLDLRRPVLQKNLILRNRITLLVRNYLAKYGFTEVETPILCRSTPEGARDYLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++G FYALPQ+PQ YKQLLM  G DRYFQIA CFRDED R+DR P EF Q+D+EMSF
Sbjct: 178 SRISKGEFYALPQSPQLYKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFSQIDIEMSF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+++DI +  E +++ +F++          F RI YD  + +YG+DKPDLR  + ++NV+
Sbjct: 237 VDEEDIWSMTEGLMKEIFKDIKGIEL--PEFKRIPYDTCMEKYGSDKPDLRFDMPLYNVS 294

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361
           E F ++EF+VF   L  N G  + A+  K G    +R   D++ ++ +  G   LA +  
Sbjct: 295 EVFANTEFKVFENCL--NEGGIIQAMNVKNGADKFSRKQLDKLQDYVKVYGAKALANL-- 350

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
           +L   G     G V K L+    EA+R  L++++ D  FF+A D  K    +  A R  +
Sbjct: 351 KLTSEGFA---GSVTKVLSDAEKEALRTMLNIEENDIVFFVA-DKKKVAQTSLGALRVKL 406

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +L +IN + +EF W+ DFP +E++E E +   AH+PFT P         +D     + 
Sbjct: 407 GHDLDLINKDAYEFLWVTDFPMFEYDENENRYVAAHHPFTSPNLEDVDKLMSDPAHCYSR 466

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+ SG IR H  ++  + F  +G++ E    +F     AFQ G PPHGG+ 
Sbjct: 467 AYDLVLNGYELLSGSIRIHDQKLQEKVFEAIGMTLEEAHEKFSWFMDAFQYGTPPHGGVG 526

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            G++R+ M+L G  N+R+V  FP + +  DL+  +PS V   QL+ELG+
Sbjct: 527 IGLERLTMILAGTDNIRDVVAFPKTASASDLMAQAPSPVDPTQLKELGI 575


>gi|28871126|ref|NP_793745.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|37999385|sp|Q87Y31|SYD_PSESM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|28854376|gb|AAO57440.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 591

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E    N    +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVL--NVEFGDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   G     R+  D   ++    G  GLAYI   
Sbjct: 300 DQLNAVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K +   N   I  R+   DGD  FF A D  K  S A  A R  I 
Sbjct: 359 ERAKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIKIG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L +  C  +   W++DFP +E N ++      H+PFT P+   E L+ N   ++ +  
Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCTPEELEANPATAL-SRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A 
Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|257126613|ref|YP_003164727.1| aspartyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257050552|gb|ACV39736.1| aspartyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 591

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/606 (40%), Positives = 370/606 (61%), Gaps = 24/606 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           YR +   +L + ++G  V LSGWV +VR  G   F+D+RD YGITQ++ N +      FE
Sbjct: 2   YRNYKLNELKMENIGEEVVLSGWVSKVRDLGHFTFIDLRDRYGITQILVNEEVSGKELFE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +++EWV+ + G V  RS++  N NI TG IE+ A+ IEILS +++LP  +      
Sbjct: 62  EARKLKNEWVIKVTGKVAERSSK--NKNIPTGDIEVEAKNIEILSRSKQLPFEIDETGNL 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E++R  YR+LD+RR  +  NI+KR  ++ S+R  M    F++  TPIL  ++PEGARDF
Sbjct: 120 NENMRLTYRYLDIRRPRMLNNIIKRNDMLFSIRKFMNENGFLDIDTPILAKATPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQ+LM SG D+Y+Q+A CFRDED R+DR P EF QLD E
Sbjct: 180 IVPSRINKGDFYALPQSPQLFKQILMVSGVDKYYQLAKCFRDEDLRADRQP-EFTQLDFE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DILN  E++ + VF++ + G  ++ NF R+ YDDA+  YG+DKPDLR  + + 
Sbjct: 239 MSFVEQEDILNVTESLAKQVFKDVT-GIEITENFERMSYDDAMNFYGSDKPDLRFDMKLI 297

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQ-PGLAY 358
           ++++   +  F VF    +V  G  V AI A      +R +   + ++ ++  +  GLAY
Sbjct: 298 DLSKETQNCGFGVFEN--AVKDGGSVKAIVAPNAEKFSRKYIKDLEDFVKTYFKAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
           I  +++E+G +    P+AK         I  +L +++ +    +A D  K       A R
Sbjct: 356 I--KINENGEIN--SPIAKFFTEEKLAEITQKLGIKNNEIALILA-DKYKIVHDGLGALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLS 476
             + +EL +IN + F+F W++DFP +EW+EEE +    H+PFT + Q   + L  N+L  
Sbjct: 411 LKLGEELELINKDSFKFLWVVDFPMFEWSEEENRYKAQHHPFTSIKQEDRKYLDSNELDK 470

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           IK   YD+V NG+EI  G IR H  E+  + F  +G+SKE  +++FG      + G+PPH
Sbjct: 471 IKTDSYDIVLNGYEIGGGSIRIHEEELQEKVFEKLGLSKEEQQDKFGFFLEVLKYGVPPH 530

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A GIDR +M +L   +++EV  FP +    DL+ G+P+ +    L E  LRI     
Sbjct: 531 GGLAFGIDRWLMAMLKENSIKEVIPFPKTNKGQDLMTGAPAEIEENILAE-DLRI----- 584

Query: 597 KILKIS 602
           K+LK+ 
Sbjct: 585 KLLKVE 590


>gi|308174456|ref|YP_003921161.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607320|emb|CBI43691.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554375|gb|AEB24867.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328912780|gb|AEB64376.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 592

 Score =  445 bits (1145), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/599 (41%), Positives = 360/599 (60%), Gaps = 16/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ CG++    +G  V+L GWV + R  GG+IF+D+RD  GI QVV NPD +      A
Sbjct: 4   RTYYCGEITEKAIGETVKLKGWVQKRRDLGGLIFIDLRDRSGIVQVVFNPDVSKEALAAA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           +++R+E+VL I+G V +R   T+N N+ TG+IE+ A+ + +LS A+  P P+  +  +  
Sbjct: 64  EAIRNEYVLDIEGTVSAREEGTVNPNLKTGKIEIKAEAVTVLSTAKTPPFPISDQAADVS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R K+R+LDLRR  + + +  R ++  S+R  +    F++  TPILT SSPEGARD+L
Sbjct: 124 EDVRLKHRYLDLRRPAMFQTLQMRHQVTKSIRHFLDENGFLDIETPILTKSSPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGF+RY+Q+A CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQIFKQLLMVSGFERYYQVARCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI+   E ++  V  E + G  VS    R+ Y++A+  YG+DKPD R  +++ +
Sbjct: 243 SFMSQEDIMALAEKMMAKVMLE-TKGVEVSLPLPRMTYEEAMNSYGSDKPDTRFGMLLTD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           V++    +EF+VFS   +V  G  V AI  KG  G+  R   D +  +A + G  GLA  
Sbjct: 302 VSDIVKDTEFKVFSS--AVANGGVVKAINVKGAAGDYSRKDIDALGVFAGNYGAKGLA-- 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W   E+  V   GP+AK  +      +   LD  +GD   F A D  +  + +  A R 
Sbjct: 358 -WVKVEADGVK--GPIAKFFDNEKQAKLAEALDASEGDLLLFGA-DKFEVVAQSLGALRL 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +E G+I+ + F F W++D+P  E +EEE +   AH+PFTMP      L       +K
Sbjct: 414 KLGKERGLIDESLFNFLWVVDWPLLEHDEEEGRFYAAHHPFTMPVREDLDLIETAPEDMK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+  G IR    +V  + F  +G +KE  E  FG L  AF+ G PPHGG
Sbjct: 474 AQAYDLVLNGYELGGGSIRIFEKDVQEKMFGLLGFTKEEAEEEFGYLLEAFEYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           IA G+DR+VMLL G  N+R+   FP + +   LL  +P  VS  QL EL L +    K+
Sbjct: 534 IALGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPGEVSDAQLEELHLSVKRKVKQ 592


>gi|149177716|ref|ZP_01856316.1| Aspartyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148843366|gb|EDL57729.1| Aspartyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 587

 Score =  445 bits (1145), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/592 (41%), Positives = 355/592 (59%), Gaps = 16/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG+L    VG  V L+GWV R R HGG+ F+D+RD YG+TQ+V NPD  +A  E+A
Sbjct: 3   RTHTCGELRTDHVGQTVTLAGWVIRGRDHGGLAFIDLRDRYGVTQIVFNPDRDAAMHELA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP- 121
           +S+R+E V+ + G V+ R  +  N  + TG+IE+ A ++++L+ ++  P    G  E P 
Sbjct: 63  RSLRAEDVIQVSGEVVLRD-DRENEKLATGKIEIRAHELKVLNKSKTPPFEP-GTSELPN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R  YRFLDLR + L + +  R R+    R       F+E  TPIL  S+PEGARD+L
Sbjct: 121 EELRLTYRFLDLRSERLQEALKVRHRLTKLTRDYFDEHQFLEIETPILGRSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++GSFYALPQ+PQ YKQ+LM  G+DRY QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 181 VPSRVHEGSFYALPQSPQIYKQILMIGGYDRYMQIARCFRDEDLRADRQP-EFTQIDLEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +FVEQ+DIL  ++ ++  + +E  +   ++    R  Y D + +YG+DKPDLR  + + +
Sbjct: 240 AFVEQEDILTLIDGLIARILKELRSIE-ITEPLPRYDYHDVMEKYGSDKPDLRFGLELID 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V E     +F VF K +    G  V  + AK      +R   D + E+    G  GLA  
Sbjct: 299 VGEIAASCDFAVFKKTMET--GGRVRGLNAKAAADRYSRKDIDGLTEFVGEYGAKGLA-- 354

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F+++ + G      P+AK  +  + + I   ++ + GD  FF+A       +  A  RN 
Sbjct: 355 FFKVTDEGL---HSPIAKFFSDEDKQKIMEAMNAEVGDLLFFVADQCAVTSAALAALRNR 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +EL +   + FE CW+++FP   +NEEEK+ D  H+PF  P         +D   ++A
Sbjct: 412 LGKELELYGPDDFECCWVVNFPLLSYNEEEKRWDAEHHPFCQPVEEDVQYFESDPAKVRA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+E+ASG +R H  +V    F  +GIS E  E RFG L +A + G PPH G 
Sbjct: 472 QSYDLVMNGYELASGSVRVHDQKVQQTIFDLLGISAEEAEERFGFLLQALRYGAPPHAGA 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL G  N+R+V  FP +Q   DLL G+PS V   QLR+L +++
Sbjct: 532 ALGLDRLVMLLCGNDNIRDVIAFPKTQKAADLLSGAPSEVDPHQLRDLRIKV 583


>gi|291279933|ref|YP_003496768.1| aspartyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754635|dbj|BAI81012.1| aspartyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 599

 Score =  445 bits (1145), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 245/590 (41%), Positives = 361/590 (61%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG+L ++++   V L GWV + R HGG+IF+D+RD  GITQVV NP+      + A
Sbjct: 10  RTHTCGELNINNLNEEVILMGWVQKRRDHGGVIFVDLRDREGITQVVFNPEYNENAHKKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +R+E+V+ + G+V  R   T N  + TG+IE+   +++IL+ ++ LP  +       E
Sbjct: 70  EELRTEYVIAVKGVVSKRPEGTENPKLKTGEIEVMVSELKILNTSKVLPFTLDEYSNVGE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  L +N++ R  ++ ++R  +  + F++  TP LT S+PEGARD+LV
Sbjct: 130 DIRLKYRYLDLRRRPLQRNLILRHNLVRTIREFLYKKGFLDIETPFLTKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQLLM SGFD+YFQI  CFRDED R+DR P EF QLDMEMS
Sbjct: 190 PSRVNPGKFYALPQSPQMFKQLLMISGFDKYFQIVKCFRDEDLRADRQP-EFTQLDMEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++D+++ +E +   +F++   G  +   F R+ Y +A+ +YG D PD R  + +  +
Sbjct: 249 FIDREDLMDLIEEMFVEIFDKVL-GLKIERPFPRMSYTEAMEKYGHDAPDTRFEMFLKTI 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
                   F+VF+   +V  G  V AI AKGG   +R   D + ++  S G  GLAYI  
Sbjct: 308 NNLVDGCGFKVFAD--AVKDGGVVKAINAKGGAKFSRKEIDELTDFVCSLGAKGLAYI-- 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +++E G      P+ K L    T +I   ++ + GD  FF AGD      + +  R  + 
Sbjct: 364 KINEDGL---QSPIIKFLGEDVTNSIVKEMNGEVGDIIFFGAGDEKTVNLYMSKLRLLLG 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++LG+I+ N + F W+ DFP  EW+EEEK+    H+PFT P      L   D   I+A  
Sbjct: 421 KKLGLIDENKYSFTWVTDFPLLEWDEEEKRYVAMHHPFTSPVDEDIPLFDTDPGKIRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H S+V  + FS +G+++E  E +FG    A + G PPHGGIA 
Sbjct: 481 YDLVLNGSEIGGGSIRIHRSDVQEKMFSVLGLTEEEREYKFGFFIEALRYGTPPHGGIAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIDRI  +   A+++R+V  FP +Q   DL+  +PS V  +QL+EL +++
Sbjct: 541 GIDRIASIFAKAESIRDVIAFPKTQKATDLMCDAPSFVDEKQLKELFIKV 590


>gi|331016436|gb|EGH96492.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 591

 Score =  445 bits (1145), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E    +    +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVL--DVEFGDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   G     R+  D   ++    G  GLAYI   
Sbjct: 300 DQLNAVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K +   N   I  R+   DGD  FF A D  K  S A  A R  I 
Sbjct: 359 ERAKGPEGLQSPIVKFIPEENLNVILDRVGAADGDIVFFGA-DKFKVVSEALGALRIKIG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L +  C  +   W++DFP +E N ++      H+PFT P+   E L+ N   ++ +  
Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCSPEELEANPATAL-SRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A 
Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|172039065|ref|YP_001805566.1| aspartyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|226710852|sp|B1WRQ9|SYD_CYAA5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|171700519|gb|ACB53500.1| aspartyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 598

 Score =  445 bits (1145), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/609 (41%), Positives = 363/609 (59%), Gaps = 33/609 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH C  +  +D+   V L GWV R R HGG+IF+D+RD  GI Q+V++P      + IA
Sbjct: 2   RTHYCNHISATDIDKTVTLFGWVDRRRDHGGVIFIDLRDRTGIVQIVSDPQRTPTSYPIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG-EREY 120
           +++R+E+V+ I G V  R  E++N  I TG++E+ A+ IE+L+ V ++LP  V   E E 
Sbjct: 62  ETLRNEYVVKIIGQVSQRPPESLNPKIPTGEVEIYAESIELLNGVNKQLPFVVSSLEAEL 121

Query: 121 -PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178
             E  R KYR+LDLRRD + KN+  R  ++ +MR  +  E  F+E  TPILT S+PEGAR
Sbjct: 122 VKEETRLKYRYLDLRRDRMAKNLQLRHAVVKAMRRYLEDEQQFMEIETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGQWYALPQSPQLFKQLLMVSGCDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +++IL+  E ++  +F+   N   +   F R+ Y DA+ +YGTD+PD R  + 
Sbjct: 241 MEMSFMSEEEILDLNEGLVCHIFKAVKNIE-LPRPFPRLTYQDAMAKYGTDRPDTRFDLT 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-----------GGNRAFCDRMNEW 347
           + +V++    S F+VFS   +V  G +V  +P  GG           GG+      + + 
Sbjct: 300 LVDVSDIVKDSGFKVFSG--AVKNGGKVKVLPIPGGNDIISNVQIKPGGD------LFKE 351

Query: 348 ARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407
           A   G  G+AYI  R+ E+  +  +G +  +L       +  R   + G    F AGD  
Sbjct: 352 ATDAGAKGIAYI--RVKENNKLDTIGAIKDNLTEEQKRELLARTGAKPGYLLLFGAGDTD 409

Query: 408 KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
                 +  R  I Q + +I+       WI +FP +EWN +EK+++  H+PFT P   + 
Sbjct: 410 TVNKSLSRLRLVIGQRMNLIDPEKINLLWITEFPMFEWNADEKRLEALHHPFTAP--NLA 467

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
            L  NDL + +A  YDLV NG EI  G +R +  E+  + F  +G+S E   N+FG L  
Sbjct: 468 DL--NDLATARAQAYDLVYNGVEIGGGSLRIYQKEIQEKVFETIGLSLEEAYNKFGFLLE 525

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPHGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +P++V  +QL+EL
Sbjct: 526 AFEYGTPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQASCLLTEAPASVDTKQLKEL 585

Query: 588 GLRIVENPK 596
            ++    PK
Sbjct: 586 QVKSTYKPK 594


>gi|217077880|ref|YP_002335598.1| aspartyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|226736545|sp|B7IE30|SYD_THEAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|217037735|gb|ACJ76257.1| aspartyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 581

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/593 (41%), Positives = 359/593 (60%), Gaps = 25/593 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH+CG+L + DVG  V LSGWV R+R  GGI F+ +RD YG+TQVV NP+S  +EI++
Sbjct: 2   YRTHTCGELNIKDVGKKVVLSGWVDRIRDLGGIKFIILRDRYGVTQVVVNPESPAYEISQ 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +  EWV+ I+G V  R  E+      TG+IE+  +KI +LS AE LP P +   +  E 
Sbjct: 62  KIGREWVIQIEGTVSER-PESTKTETQTGEIEVIVEKINVLSKAE-LP-PFYPGDKVSED 118

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLR   ++KN++ R ++  + R  +    F+E  TP LT S+PEGARDFLVP
Sbjct: 119 LRLKYRYLDLRDKNMNKNLIIRHKMAQAAREFLNKHGFLEIETPYLTKSTPEGARDFLVP 178

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+ +G FYALPQ+PQ +KQLLM SGFD+Y+Q A CFRDED R+DR P EF Q+D+EMSF
Sbjct: 179 SRLQKGKFYALPQSPQLFKQLLMVSGFDKYYQFARCFRDEDLRADRQP-EFTQIDIEMSF 237

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE +D++N MEN +R V+   S G  +   F RI YD+A+  YG+DKPD R  + + ++T
Sbjct: 238 VEMEDVINLMENFVRYVYS--SVGIKLPEKFDRITYDEAMEIYGSDKPDRRFGMELKDLT 295

Query: 304 EHFVHSEFRVFSKILSVNPGYE--VWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            +F  ++F++   +++     +  +  IP      +R     +  + +  G  GL    W
Sbjct: 296 NYFKDTDFKIIKNVINNGGSIKGFITQIPI-----SRKIASELESYVKEFGLGGL---LW 347

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              E+G ++   P  K L   + E I    +++DGD     A    +  + A  A R  I
Sbjct: 348 FKLENGEIS--SPTNKFLG-GSYENISKDYNLKDGDVVLLAAHTNREQLNTALGALRLRI 404

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+E        F+  W++DFPF EWNEEEK+    H+PFTMP+  ++S K  D   IKA+
Sbjct: 405 AKEHFKNLEEGFDALWVVDFPFLEWNEEEKRYVARHHPFTMPK-NIDS-KPED---IKAY 459

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD++ NG EI  G IR H SE+  + F  +G++ +  E +FG L  A + G PPHGGIA
Sbjct: 460 AYDMILNGNEIGGGSIRIHNSEIQRKVFEIIGLTNKEAEEKFGFLLEALKYGAPPHGGIA 519

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G DR+V + L   ++R+V  FP + +    L G+PS+V   QL EL +++ +
Sbjct: 520 FGFDRMVSIALRTSSIRDVIAFPKTTSGTCQLTGAPSSVDKSQLEELSIKLFD 572


>gi|229815946|ref|ZP_04446269.1| hypothetical protein COLINT_03001 [Collinsella intestinalis DSM
           13280]
 gi|229808499|gb|EEP44278.1| hypothetical protein COLINT_03001 [Collinsella intestinalis DSM
           13280]
          Length = 598

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/595 (40%), Positives = 349/595 (58%), Gaps = 13/595 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSA 57
           MH   TH+CG+L  +++G  V L+GWV R R HGG+IF D+RD  GITQ+  +P   D  
Sbjct: 12  MHCMHTHTCGELRAANIGEEVTLTGWVSRRRDHGGLIFCDLRDREGITQINFDPEHSDGD 71

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F+IA+++R EW + + G+V  R  + +N  + TG+IE+      +L+ ++  P  +   
Sbjct: 72  AFKIAETMRPEWPIRVHGVVRDRGHDAVNPRLATGEIEVLVDHATVLNRSKTPPFQIEDG 131

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            E  E  R +YR+LDLRR  +   +  R+    ++R  +    F E  TP L  S+PEGA
Sbjct: 132 IETAEDTRLRYRYLDLRRPEMAARLRLRSDFTFAIRSALHDRAFTEVETPALFKSTPEGA 191

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RDF+VPSR+  GSFYALPQ+PQ  KQLLM  G +RY+Q+A CFRDED R+DR P EF Q+
Sbjct: 192 RDFVVPSRLQPGSFYALPQSPQLLKQLLMVGGVERYYQVAKCFRDEDLRADRQP-EFTQV 250

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFVEQDD++  +E+VL   F     G  +     R+ Y DA+  YG+DKPD R  +
Sbjct: 251 DIEMSFVEQDDVMAQLEDVLSDAFARV--GVEMPTPLRRLSYWDAMDTYGSDKPDTRYGM 308

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGL 356
            + ++T+ F +S F+VF+   +   G+ V A+ AKG G   RA  D++ + A + G  GL
Sbjct: 309 ELVDLTDVFANSAFKVFASAATTE-GHVVKAVNAKGAGAWPRAQIDKLAKVAATFGAKGL 367

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I +R D S N     P+ K         +R R D++ GD   F AG  L+        
Sbjct: 368 AWIAFREDGSVN----SPIVKFFTDEEMTELRRRCDVEPGDLVMFAAGPRLEANGILGGM 423

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R+H+A  L +      EF W+++FP + W+EE ++ +  H PFT+P      L   D L 
Sbjct: 424 RSHMADALNVPR-EGHEFLWVVNFPLFHWDEEGQRYEAEHQPFTLPHVDELHLLDEDPLK 482

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + +  YD V +GFE   GG+R H +E+ L+    +G S+E    +FG L  A + G PP 
Sbjct: 483 MGSCTYDFVMDGFEAGGGGMRIHDAELQLKMLEFMGFSEERARAQFGFLMEALEFGAPPM 542

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GG A G+DR+ MLL G  ++R+V  FP + +  DL+  +PS VS+ QL+E+GLR+
Sbjct: 543 GGFALGLDRVCMLLAGTDSIRDVMAFPKTSSGSDLMSAAPSEVSMAQLKEVGLRL 597


>gi|148270483|ref|YP_001244943.1| aspartyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|147736027|gb|ABQ47367.1| aspartyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 579

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/595 (41%), Positives = 354/595 (59%), Gaps = 25/595 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L  +D G  V+L GWV R+R  GG+ F+D+RD YG TQ+V + +S  + +   
Sbjct: 3   RTHTCGELRATDEGKKVKLCGWVDRIRDLGGVRFIDLRDRYGETQIVCDVNSEAYSVVDE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E V+ ++G+V  R   T N NI TG+IE+ A+KIEILS+A+  PLP +      E +
Sbjct: 63  LTRESVVLVEGIVRKRPEGTENPNIETGEIEVVAEKIEILSLAD--PLPFYPGEAPKEEM 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR++DLR + + +NI+ R ++   +R       F+E  TP LT S+PEGARDFLVPS
Sbjct: 121 RLKYRYIDLRSERMKRNIILRYKVSKIIRDYFDELGFLEIETPFLTRSTPEGARDFLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D+EMSFV
Sbjct: 181 RLRPGKFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQVDVEMSFV 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +D+LN  E ++  VF E S G  +   F RI YD+A+ +YGTDKPD R  + + +   
Sbjct: 240 DVEDVLNVSERMISRVFRE-SLGVDLEVPFDRITYDEAMEKYGTDKPDRRFGMELRDFGY 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            FV++EF+V   +L      + + +P      +R    +  E      + GL  + W   
Sbjct: 299 AFVNTEFKVVRNVLDEGGSVKGFIVPRFASEMSRK---KGEELMARMKELGLGGLIWFKV 355

Query: 365 ESGNVAGMGPVAKHL-----NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARN 418
           E G  +   P  KHL      I  TE      +M + D C   A       + A    R 
Sbjct: 356 EGGITS---PHLKHLEKEFRKIAETE------NMNEEDVCLIAAHTDRNLLNEALGTLRL 406

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I +E        F+  W++DFP++EW+EEE++    H+PFTMP   +E+L G+D   ++
Sbjct: 407 EIGKERFSHLARGFDVLWVVDFPYFEWSEEEERFVARHHPFTMPV--LETL-GDDYTKVR 463

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+  G IR H  ++  + F  +G+S+E  + +FG    AF+ G+PPHGG
Sbjct: 464 AKAYDLVINGYEVGGGSIRIHRRDIQEKIFKLLGLSEEEAQKKFGFFLEAFRYGVPPHGG 523

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           IA G+DR+V ++ G  ++REV  FP + N   LL G+P+ V   QLREL +RI E
Sbjct: 524 IAFGLDRLVSIIAGESSIREVIAFPKTGNGVCLLTGAPAEVDERQLRELRIRIEE 578


>gi|322390475|ref|ZP_08063994.1| aspartate--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321142827|gb|EFX38286.1| aspartate--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 584

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/593 (40%), Positives = 358/593 (60%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVREEHIGTRITLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPETVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + GLV +R  E  N N+ TG +EL  + I +L+ A+  P  +    E  
Sbjct: 63  AESIRSEYVVEVTGLVEAR--EQANPNLPTGAVELKVEAITVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIEVTLPFPRMNYDDAMALYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   +  R   D++ E A+  G  GLA++
Sbjct: 299 LTELVKGVDFKVFSEAPAVK------AIVVKGAADHYSRKDIDKLTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            +     G + G  PVAK L  + ++ +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KY---AEGTLNG--PVAKFLTDLTSD-LTAALQLEDKDLVLFVA-DTLEVANATLGALRV 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+EL +I+ N + F W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++
Sbjct: 406 RLAKELDLIDNNQYNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETEHELEGDLSKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G +KE    +FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINHKDLQERMFKALGFTKEAANEQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L++
Sbjct: 526 LAIGLDRFVMLLAGEDNIREVIAFPKNNKATDPMTQAPSVVSEKQLDELNLQV 578


>gi|237800215|ref|ZP_04588676.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331023072|gb|EGI03129.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 591

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   G     R+  D   ++    G  GLAYI   
Sbjct: 300 DQLTGVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K +   N   I  R+   DGD  FF A D  K  S A  A R  I 
Sbjct: 359 ERAKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIKIG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L +  C  +   W++DFP +E N ++      H+PFT P+   E L+ N   ++ +  
Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFTALHHPFTAPKCTPEELEANPATAL-SRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A 
Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|332071383|gb|EGI81877.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 587

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R  YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLHYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+ L+V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEALAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 -KVVDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|295706711|ref|YP_003599786.1| aspartyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804370|gb|ADF41436.1| aspartyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 593

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/599 (40%), Positives = 355/599 (59%), Gaps = 21/599 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-- 58
           M   R++ CGD+     G  V L GWV + R  GG+IF+D+RD  G+ QVV NP+ +   
Sbjct: 1   MMTKRSYYCGDVTEQATGETVLLKGWVQKRRDLGGLIFIDLRDRGGVVQVVFNPEKSAEA 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            +IA+ VR+E+VL + G V++R   T+N N+ TG+IE+ A++I +L+ A+  P  +  + 
Sbjct: 61  LKIAEDVRNEFVLEVQGTVVAREEGTVNPNLKTGKIEVHAEQITVLNKAKTPPFAIADQT 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  E +R KYR+LDLRR  +   +  R  I  ++R  +   +F++  TPILT S+PEGAR
Sbjct: 121 EVSEDVRLKYRYLDLRRSEMFNTLKMRNDITKTIRDFLDQNDFLDVETPILTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV++G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D
Sbjct: 181 DYLVPSRVHEGEFYALPQSPQIFKQLLMVSGVERYYQIARCFRDEDLRADRQP-EFTQID 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ Q+DI+   E ++  V +   + + ++  F R+ YD+A+ RYG+DKPD R  + 
Sbjct: 240 IETSFLSQEDIMTMTEEMMSKVMKRVKDLD-ITTPFPRMSYDEAMSRYGSDKPDTRFEME 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356
           + N++E      F+VFS   +V  G EV AI  KG     +R   D + E+ +  G  GL
Sbjct: 299 LVNLSELVKDCGFKVFSA--AVENGGEVKAINVKGASSSYSRKDIDALTEFVKIYGAKGL 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A++    D        GP+AK  N    +     L  ++GD   F+A       S  ADA
Sbjct: 357 AWLKVEAD-----GLKGPIAKFFNEDEQKQFAEALQTEEGDLLLFVADKK----SVVADA 407

Query: 417 ----RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               R  +A+E GII+   F F W+ D+P  E +EE+ +   AH+PFTMP      +  +
Sbjct: 408 LGALRLKLAKEQGIIDETKFNFLWVTDWPLLEHDEEDNRYYAAHHPFTMPVREDLPMLES 467

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D   ++A  YDLV NG+E+  G +R +  ++  + F  +G + E    +FG L  AF+ G
Sbjct: 468 DPGQVRAQAYDLVLNGYELGGGSLRIYERDIQEKMFKTLGFTLEEAYEQFGFLLEAFEYG 527

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            PPHGGIA G+DR+VMLL G  N+R+   FP + +   LL  +P  VS  QL EL L++
Sbjct: 528 TPPHGGIALGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTNAPGEVSEAQLDELHLQV 586


>gi|294501364|ref|YP_003565064.1| aspartyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351301|gb|ADE71630.1| aspartyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 592

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 356/596 (59%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R++ CGD+     G  V L GWV + R  GG+IF+D+RD  G+ QVV NP+ +    +IA
Sbjct: 4   RSYYCGDVTEQATGETVLLKGWVQKRRDLGGLIFIDLRDRGGVVQVVFNPEKSAEALKIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+VL + G V++R   T+N N+ TG+IE+ A++I +L+ A+  P  +  + E  E
Sbjct: 64  EDVRNEFVLEVQGTVVAREEGTVNPNLKTGKIEVHAEQITVLNKAKTPPFAIADQTEVSE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +   +  R  I  ++R  +   +F++  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRSEMFNTLKMRNDITKTIRDFLDQNDFLDVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHEGEFYALPQSPQIFKQLLMVSGVERYYQIARCFRDEDLRADRQP-EFTQIDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q+DI+   E ++  V +   + + V+  F R+ YD+A+ RYG+DKPD R  + + N+
Sbjct: 243 FLSQEDIMTMTEEMMSKVMKRVKDLD-VTTPFPRMSYDEAMSRYGSDKPDTRFEMELVNL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VFS   +V  G EV AI  KG     +R   D + E+ +  G  GLA++ 
Sbjct: 302 SELVKDCGFKVFSA--AVENGGEVKAINVKGAASSYSRKDIDALTEFVKIYGAKGLAWLK 359

Query: 361 WRLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA--- 416
              D      G+ GP+AK  N    +     L  ++GD   F+A       S  ADA   
Sbjct: 360 VEAD------GLKGPIAKFFNEDEQKQFAEALQTEEGDLLLFVADKK----SVVADALGA 409

Query: 417 -RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  +A+E GII+   F F W+ D+P  E +EE+ +   AH+PFTMP      +  +D  
Sbjct: 410 LRLKLAKEQGIIDETKFNFLWVTDWPLLEHDEEDNRYYAAHHPFTMPVREDLPMLESDPG 469

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            ++A  YDLV NG+E+  G +R +  ++  + F  +G + E    +FG L  AF+ G PP
Sbjct: 470 QVRAQAYDLVLNGYELGGGSLRIYERDIQEKMFKTLGFTLEEAYEQFGFLLEAFEYGTPP 529

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGGIA G+DR+VMLL G  N+R+   FP + +   LL  +P  VS  QL EL L++
Sbjct: 530 HGGIALGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTNAPGEVSEAQLDELHLQV 585


>gi|239827843|ref|YP_002950467.1| aspartyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511862|sp|C5D509|SYD_GEOSW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|239808136|gb|ACS25201.1| aspartyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 594

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/598 (40%), Positives = 365/598 (61%), Gaps = 16/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ CG++    +G  V L GWV + R  GG+IF+D+RD  GI QVV +P+ +     +A
Sbjct: 4   RTYYCGEITEKAIGEKVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFSPEVSKEALNVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+VL ++G V++R   TIN N+ TG+IE+ A++I I++ A+  P  +  + +  E
Sbjct: 64  EKVRNEYVLSVEGTVVAREEGTINPNLPTGKIEIQAERITIINEAKTPPFVITDQTDVAE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + + +  R R+  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 EVRLKYRYLDLRRPVMFRTLQLRHRVTKAIRDFLDGEGFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GF+RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHPGEFYALPQSPQIFKQLLMVAGFERYYQIARCFRDEDLRADRQP-EFTQIDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++I+   E ++  V  + + G  +S  F R+ YD+AI RYG+DKPD R  + + +V
Sbjct: 243 FMSQEEIMQLTERMMAYVM-KMAKGIDISLPFPRMSYDEAISRYGSDKPDTRFGLELVDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E   +S F+VF+   ++  G +V AI  KG     +R   D + E+    G  GLA++ 
Sbjct: 302 SEIVKNSSFKVFAG--AIANGGQVKAINVKGAADQYSRKDIDALAEFVARYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK         +   L+ + GD   F+A       +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFFTEEEQNGLIRTLEAEAGDLLLFVADHKTVVANALGALRVKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479
            ++L +I+   F F WI D+P  E++EE+ +   AH+PFTMP +  +  L+ N    ++A
Sbjct: 415 GKDLNLIDETKFNFLWITDWPLLEYDEEDGRYYAAHHPFTMPVREDLPQLETNP-EKVRA 473

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+E+  G +R    EV  + F  +G ++E    +FG L  AF+ G PPHGGI
Sbjct: 474 QAYDLVLNGYELGGGSMRIFEREVQEKMFRALGFTEEEARKQFGFLLEAFEYGTPPHGGI 533

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VMLL G  N+R+   FP + +   LL  +PS VS +QL EL L +V + KK
Sbjct: 534 ALGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVSEQQLEELHL-VVNSEKK 590


>gi|168484062|ref|ZP_02709014.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172042695|gb|EDT50741.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|332198725|gb|EGJ12807.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 587

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 360/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDD++  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDSMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+ L+V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEALAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|223044122|ref|ZP_03614161.1| aspartyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442516|gb|EEE48622.1| aspartyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 588

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/592 (41%), Positives = 352/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD      ++A
Sbjct: 4   RTTYCGLVTEDLLDEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALKVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ + G+V  R  ETIN  I TGQ+E+    IEI++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVQGVVTKRDPETINPKIKTGQVEVQVSNIEIINKSETPPFAINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDDNGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D+++  E +LR V ++   G  V   F R+ Y +A+ RYG+DKPD R  + + N
Sbjct: 243 SFVDQEDVISMGEEMLRKVVKDV-KGIDVEGPFPRMTYAEAMDRYGSDKPDTRFDMELIN 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF   +  N G E+ AI A+G      R   D + E+    G  GLA++
Sbjct: 302 VSQLGKDMDFKVFKDTVE-NEG-EIKAIVAEGAADQYTRKDMDSLTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+A+     N E ++     + GD   F+A  P          R  
Sbjct: 360 --KVVEDGL---SGPIARFFEDANVETLKTLTGAKPGDLVMFVADKPSVVAQSLGALRIK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+ +   F W+ D+P  E++E+ K+   AH+PFT P+    S   ++  +++A
Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKQEDISKLDSEPENVQA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G S E  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFSTEQAKEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLEELSLRI 586


>gi|169833717|ref|YP_001695474.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|238688324|sp|B1I9S9|SYD_STRPI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|168996219|gb|ACA36831.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 587

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTSIQAE-LTTALSLEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSTVALKQLEELSLQVEED 581


>gi|323699397|ref|ZP_08111309.1| aspartyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459329|gb|EGB15194.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 606

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/595 (41%), Positives = 348/595 (58%), Gaps = 13/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH   +L  +D+   V L GWV   R HGG+IFLD+RD  G+TQVV NP+  +   E A
Sbjct: 22  RTHHNNELTAADMDREVCLMGWVQFRRDHGGLIFLDLRDREGMTQVVFNPEDNATVHERA 81

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++R E+V+ + G V  R     N N+ITG+IE+     ++L+ +E  P P+    E  E
Sbjct: 82  HAIRPEYVVAVKGRVRPRPEGMANPNMITGEIEIEVTDYKLLNTSETPPFPIEDRVEVAE 141

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYRFLDLRR +L +N + R +   S+R  + A  F+E  TP+LT S+PEGARDFLV
Sbjct: 142 NLRLKYRFLDLRRPSLARNFILRNKAAQSVRRYLDALGFLEVETPVLTKSTPEGARDFLV 201

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVNQG FYALPQ+PQ +KQ+LM +G DRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 202 PSRVNQGEFYALPQSPQLFKQMLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 260

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++  I +  E ++R +F E + G  + + F R+ + DA+R YG DKPDLR  +   ++
Sbjct: 261 FVDEALIQDMAEGMVRTLFRE-TIGVNLPDPFPRMTFADAMRDYGVDKPDLRFELKHIDI 319

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+ F  S F+VF+    V    +V  +P  G   +R   D   ++    G  GLA+I  +
Sbjct: 320 TDVFKESGFKVFASSELV----KVMVVPG-GAELSRKEIDEYTKFVEIYGSKGLAWI--K 372

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G      P+ K  +      +R R   + GD  FF AG      +   + R  + +
Sbjct: 373 VKEDGE--WQSPIVKFFSEAEIATLRERSGCKPGDILFFQAGPADVANAALGNLRCELGK 430

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              +I    F+  WI DFP  EW+ +EK+    H+PFT  +     +   D     A  Y
Sbjct: 431 RFNLIREGEFKPVWITDFPLLEWDPDEKRFVARHHPFTSARPEQMQVLKEDPGQAIARAY 490

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NGFE+  G IR H  E     F+ +GI KE  E +FG L  A + G PPHGGIA G
Sbjct: 491 DIVMNGFEVGGGSIRIHTEEQQEAMFAALGIGKEEAEEKFGFLMNALRYGAPPHGGIAFG 550

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR++M+L G+K++R+V  FP +Q    LL  +PS V  +QLRELG+R+ E  K+
Sbjct: 551 LDRLIMILTGSKSIRDVIAFPKTQKATCLLTEAPSEVPNKQLRELGIRLREKKKE 605


>gi|224373072|ref|YP_002607444.1| aspartyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223589148|gb|ACM92884.1| aspartyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 588

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/596 (40%), Positives = 355/596 (59%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTH C ++  + VG  V L GWV+  R HGG+IF+D+RD  GI Q+VA+P   +   ++A
Sbjct: 2   RTHYCAEVNENLVGQKVELVGWVNSHRDHGGVIFIDLRDKSGIVQIVADPADSTKAHKVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++ E+VL + GLV  R     N  + TG+IE+ A++I I + +E LP  + G++   E
Sbjct: 62  EEIKDEYVLKVKGLVRLRGEGLENPKLKTGKIEVVAEEIIIENKSEVLPFQI-GDKSVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR        + R+++  ++R    +  F++  TPILT S+PEGARD+LV
Sbjct: 121 ELRLKYRYLDLRDPNSLNTFILRSKVTKAIRDYFESNGFLDVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRIHPGEFYALPQSPQLFKQILMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE+DD++  +E +++  F+    G  VS    R+ Y +A+ +YG+DKPDLR  + M +V
Sbjct: 240 FVEEDDVIAAIEGMIKEAFK--VAGVEVSLPIPRMTYAEAMEKYGSDKPDLRFDLPMVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            + FV S   +FS I          A+   GG    +R     +  + R  G  GLAYI 
Sbjct: 298 IDEFVDSNNEIFSTIAKDKKNNRFKALKVPGGDKFYSRKMLKELENFVRKFGAKGLAYI- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ E G     GP+ K ++  +   +  +L  + GD  FF AGD      +    R  I
Sbjct: 357 -QVKEEGL---KGPIVKFMSEESLNKMIDKLKPEVGDIIFFGAGDKKTVLDYMGRLRVKI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ++G+I+ N ++F WI+DFP +E ++        H+PFTMP   M++    D  SI++ 
Sbjct: 413 ANDMGLIDENEYKFTWIVDFPMFEKDDNGNPTPL-HHPFTMPD--MDTWDEEDFESIQSI 469

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+EI  G IR H  E+  + F  +GI +   + +FG L  A + G PPHGG A
Sbjct: 470 AYDLVLNGYEIGGGSIRIHKEEIQEKVFKMLGIDEMEAKEKFGFLLDALKFGAPPHGGFA 529

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+    N+R+V  FP +Q    LL G+P  V   QL+EL +R V+ PK
Sbjct: 530 LGLDRVIMLMTKTDNIRDVIAFPKTQKAQCLLTGAPGEVDKSQLKELHIR-VKKPK 584


>gi|222151514|ref|YP_002560670.1| aspartyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|254781739|sp|B9E706|SYD_MACCJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|222120639|dbj|BAH17974.1| aspartyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 592

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/598 (39%), Positives = 356/598 (59%), Gaps = 14/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +  S +G  + L GWV + R  GG+IF+D+RD  G+ Q+V NPD       IA
Sbjct: 4   RTTYCGLVTESYIGQEIILKGWVQKRRDLGGLIFIDLRDREGVVQIVFNPDFSKEALTIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+V+ + G V  R    IN  I TG++E+   ++ I++ +E  P  +  E +  E
Sbjct: 64  ETIRSEYVIEVHGKVTMRDEAVINPKIKTGKVEVQVSEVTIINKSETPPFQIEAETDSSE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR+ L      R +I  ++R  +    F E  TP+LT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRREPLANTFKMRHQITRAVRNYLDESGFYEVETPVLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV +G FYALPQ+PQ +KQLLM  GFD+Y+QI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 184 PSRVQEGEFYALPQSPQIFKQLLMIGGFDKYYQIVKCFRDEDLRADRQP-EFTQIDIEMS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+Q+D+++  E +L+ + ++   G  ++  F R+ Y++A+R YG DKPD R  + +  +
Sbjct: 243 FVDQEDVMSMNEGMLKRIMKDV-KGIDIATPFPRMTYEEAMRDYGIDKPDTRFDMKLVTL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            +     EF+VF    +V  G  V AI  KG     +R   D + E+A+  G  GLA++ 
Sbjct: 302 NDLASKMEFKVFKG--AVESGGAVKAIVVKGASDKYSRKDIDALQEYAKIYGAKGLAWV- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ E G     GP+AK     +   +    + + GD   F+A       +  A+ RN +
Sbjct: 359 -KVTEDGL---NGPIAKFFEESHASELLDATNAEMGDLILFVADKWSVVNASLANLRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ N + F W+ D+P +E++EE  +   AH+PFT P+     +   D   ++A 
Sbjct: 415 GKELGLIDENKYNFLWVTDWPLFEYDEELDRYFAAHHPFTAPKKEHVEMLKTDKEKVQAN 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G S E  + +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDVVLNGYELGGGSIRIHDQEMQKKMFEALGFSDEEAQEQFGFLMDAFKYGAPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597
            G+DR+VMLL G  N+R+V  FP + +   LL  +PS V  +QL EL +++ +EN +K
Sbjct: 535 LGLDRMVMLLSGRSNLRDVIAFPKTASATCLLTDAPSKVDDKQLEELHIQLNIENSEK 592


>gi|289650939|ref|ZP_06482282.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 591

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   G     R+  D   ++    G  GLAYI   
Sbjct: 300 DQLTGVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K +   N   I  R+   DGD  FF A D  K  S A  A R  I 
Sbjct: 359 ERAKGPEGLQSPIVKFIPEDNLNVILDRVGAVDGDIVFFGA-DKFKIVSEALGALRIKIG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L +  C  +   W++DFP +E N ++      H+PFT P+   E L+ N   ++ +  
Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFTALHHPFTAPKCTPEELEANPATAL-SRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A 
Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|71736289|ref|YP_275916.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|97196800|sp|Q48FC1|SYD_PSE14 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71556842|gb|AAZ36053.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 591

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDSGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   G     R+  D   ++    G  GLAYI   
Sbjct: 300 DQLTGVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K +   N   I  R+   DGD  FF A D  K  S A  A R  I 
Sbjct: 359 ERAKGPEGLQSPIVKFIPEDNLNVILDRVGAVDGDIVFFGA-DKFKIVSEALGALRIKIG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L +  C  +   W++DFP +E N ++      H+PFT P+   E L+ N   ++ +  
Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFTALHHPFTAPKCTPEELEANPATAL-SRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A 
Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 535 GLDRLVMLMAGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|296875570|ref|ZP_06899642.1| aspartate--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296433494|gb|EFH19269.1| aspartate--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 584

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 239/593 (40%), Positives = 358/593 (60%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVREEHIGTHITLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPETVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + GLV +R  E  N N+ TG +EL  + I +L+ A+  P  +    E  
Sbjct: 63  AESIRSEYVVEVTGLVEAR--EQANPNLPTGAVELKVEAITVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIEVTLPFPRMNYDDAMALYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +T+     +F+VFS+  +V       AI  KG   +  R   D++ E A+  G  GLA++
Sbjct: 299 LTDLVKGVDFKVFSEAPTVK------AIVVKGAADHYSRKDIDKLTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            +     G + G  PVAK L  + ++ +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KY---AEGTLNG--PVAKFLTDLTSD-LTAALQLEDKDLVLFVA-DTLEVANATLGALRV 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+EL +I+ N + F W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++
Sbjct: 406 RLAKELDLIDNNQYNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETEHELEGDLSKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G +KE    +FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINHKDLQERMFKALGFTKEAANEQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L++
Sbjct: 526 LAIGLDRFVMLLAGEDNIREVIAFPKNNKATDPMTQAPSVVSEKQLDELNLQV 578


>gi|42527095|ref|NP_972193.1| aspartyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|62287577|sp|Q73MC2|SYD_TREDE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|41817519|gb|AAS12104.1| aspartyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 590

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/591 (40%), Positives = 349/591 (59%), Gaps = 8/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT +CG L     G  V L+GW+HR R HGGI FL++RD YG+TQVV + D++     +A
Sbjct: 6   RTVTCGGLNKDFAGKTVVLNGWIHRKRDHGGITFLNLRDRYGLTQVVVDDDASEDLKALA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S++ E+ + ++GLV  R    IN  + TG+IE+ A KIE+LS +E LP  +  +    E
Sbjct: 66  VSLKQEFCIAVEGLVRPRPDSMINKEMATGEIEVKALKIEVLSKSEVLPFQIDEKTNANE 125

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   + ++I+ R++   ++R  + +++F+E  TP    S+PEGARD+LV
Sbjct: 126 DLRLKYRYLDLRSKAMQEHIMLRSKFTFAVREFLTSKDFLEIETPTFIKSTPEGARDYLV 185

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ YKQ+LM SGFD+YFQIA C+RDED R DR P EF Q+D+EMS
Sbjct: 186 PSRLYPGKFYALPQSPQIYKQILMVSGFDKYFQIARCYRDEDARGDRQP-EFTQIDLEMS 244

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  ++D+L+  E +++  F++  N + +   F RI YD+AI  YGTDKPDLR  + M + 
Sbjct: 245 FASREDVLSLTEGMMQYAFKKSINVD-LPKTFERISYDEAIDIYGTDKPDLRFEMKMQDA 303

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
                   F VF   +S+    +   +  +    +R   + +   A+     GLA+I  +
Sbjct: 304 AFMAEIGNFAVFKDAVSLGGAVKALVVKGQAEAYSRKKIEELEAAAKIYKAKGLAWI--K 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     G V+K       E I  +L  + GD   F+A      C+     R+ + +
Sbjct: 362 VTE-GGAKLEGGVSKFFEGKEAE-ICSKLGAEKGDLILFVADKYKIACTALGAVRSKLGK 419

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG++N   F+F WI+DFP +EWNEEE K D AH+ F+ PQ    +    +   +K   Y
Sbjct: 420 DLGLLNPAEFKFAWIVDFPLFEWNEEENKWDPAHHMFSAPQEKYIATMEENPEPVKGDLY 479

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+ASG IR H  E+  + F  VG  +   E +FG L  AF+ G PPHGGIA G
Sbjct: 480 DLVLNGYEVASGSIRIHNPELQKRIFKIVGFDESEAEKKFGFLTEAFKYGAPPHGGIAPG 539

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DRIVM++ G  +++EV  FP +      +  SPS V  +QL EL L I E
Sbjct: 540 LDRIVMIMAGETSIKEVIAFPKNSFAVSPMDDSPSEVDQKQLDELHLVIKE 590


>gi|329117740|ref|ZP_08246457.1| aspartate--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326908145|gb|EGE55059.1| aspartate--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 582

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/592 (40%), Positives = 356/592 (60%), Gaps = 21/592 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVRSEHIGQEITLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPEEVSSELMAM 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ + G V +R     N N+ TGQ+EL    + IL+ ++  P  +  + E  
Sbjct: 63  AEGLRSEYVIEVTGQVEARQQS--NDNLATGQVELKVTSLTILNTSKTTPFEIKDQVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DETRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM SGFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNSGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+++ +I   +E ++  V +E + G  V+  F R+ YD A+ RYG+DKPD R  +++ +
Sbjct: 240 SFLDEYEIQEIVEGMIAKVMKE-TKGIEVTLPFPRMAYDTAMNRYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+  +V        +  K    +R   D+M E+A+  G  GLA   W
Sbjct: 299 LTEVVKEVDFKVFSQAETVKG----IVVKGKADSYSRKDIDKMTEYAKQFGAKGLA---W 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G + G  PV+K L +   + +   LD  +GD   F+A D L+  +    A R  I
Sbjct: 352 AKVVDGQLTG--PVSKFL-VPIADQLTSHLDAGEGDLILFVA-DSLEVANNTLGALRTRI 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479
           A+E  +++ + F F W++D+P +EW+EEE +   AH+PFT+P +  +E L G DL  ++A
Sbjct: 408 AKEQNLVDADKFNFLWVIDWPMFEWSEEENRYMSAHHPFTLPTEETIEYLNG-DLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++    F  +G ++E  + +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDMQANMFKALGFTEEDAKEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR VMLL G  N+REV  FP +    D +  +PSTVSV+QL EL L+I
Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSTVSVKQLEELSLQI 578


>gi|307705772|ref|ZP_07642617.1| aspartyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307620690|gb|EFN99781.1| aspartyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 587

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQAE-LTTALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDGDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSTVALKQLEELSLQVEED 581


>gi|293364654|ref|ZP_06611375.1| aspartate--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702912|ref|ZP_07639860.1| aspartyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291316912|gb|EFE57344.1| aspartate--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623592|gb|EFO02581.1| aspartyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 587

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGTVELNVTALTVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQAE-LTAALGLEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|291613441|ref|YP_003523598.1| aspartyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291583553|gb|ADE11211.1| aspartyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 598

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 250/604 (41%), Positives = 361/604 (59%), Gaps = 18/604 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L VS++G  V L GW HR R HGG+IF+D+RD  G+ QVV +PD A  F IA+
Sbjct: 2   RTHYCGQLNVSNLGQTVTLCGWAHRRRDHGGVIFIDLRDREGLAQVVCDPDRADMFAIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+VL + G V  R   T N NI +G+IE+   +IE+L+V+   P  +  E    E+
Sbjct: 62  SVRNEFVLKVTGRVRRRPEGTDNKNIPSGEIEILCHEIEVLNVSVTPPFQLDDE-NLSEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R  +R +DLRR  +  N++ R +   + R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTHRVIDLRRPQMQHNMMLRYKTARAFRRFLDDKGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQ+LM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHAGEFFALPQSPQLFKQMLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++ I+  ME ++R VF+E  N   + N F R+ Y +A+ R+G+DKPD+R  + +  VT
Sbjct: 240 LTEEQIMVLMEEMIRTVFKEVLN-VALPNPFPRMTYAEAMGRFGSDKPDMRVTLEITEVT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359
           +      F+VF+ + + + G        KGG  +R   D   ++    G  GLAYI    
Sbjct: 299 DAVKDVAFKVFAGVANSDNGRVAALRVPKGGAFSRGEIDEYTKFVGIYGAKGLAYIKVND 358

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
             +L+E G      P+ K+L+    + I  R   Q+GD  FF A D  K  + A  A R+
Sbjct: 359 ITKLNEEGL---QSPIVKNLHEAALKTIVERTGAQNGDIIFFGA-DKAKIVNDALGALRS 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I  E G  N   +E  W++DFP +E+++E K+ +  H+PFT P+    +L  +D     
Sbjct: 415 KIGHEKGYTNGKAWEPLWVVDFPMFEYDDEAKRWNACHHPFTAPKDEHLALLESDPGKCL 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDL  NG EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGG
Sbjct: 475 AKAYDLALNGSEIGGGSVRIHKEEVQSKVFRALNIGAEEAQLKFGFLLDALQYGAPPHGG 534

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-----VE 593
           +A G+DRIV ++ G++++R+V  FP +Q    LL  +PS V  +QLREL +R+     VE
Sbjct: 535 LAFGLDRIVTMMTGSESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRLRQPATVE 594

Query: 594 NPKK 597
            PK+
Sbjct: 595 TPKE 598


>gi|189424681|ref|YP_001951858.1| aspartyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189420940|gb|ACD95338.1| aspartyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 598

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/591 (41%), Positives = 349/591 (59%), Gaps = 12/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+  CG L   D+G  V L GW  R R HGG+IF+D+RD  GI QVV +P+  ++  ++A
Sbjct: 9   RSDYCGCLTAQDIGREVVLMGWALRRRDHGGLIFIDLRDREGIAQVVFDPEVNASAHQVA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VRSE+VL I G V+ R   T+N N+ TG++E+   + ++L+ ++ LP  +    E  E
Sbjct: 69  EGVRSEYVLAIKGKVIPRPEGTVNPNMKTGEVEIQVAECKLLNRSKALPFMLDEHSEVNE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LD+RR  L +N++ R ++    R  +    F+E  TP LT S+PEGARDFLV
Sbjct: 129 NIRLKYRYLDMRRPQLAQNLILRHQVAQVTRQYLTDNGFLELETPFLTKSTPEGARDFLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+NQG FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 189 PSRINQGQFYALPQSPQIFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQIDCEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++DI+  ME ++  VF+E + G  V     R+ Y +AIRR+G D PDLR  + +  +
Sbjct: 248 FIDREDIITVMEGLIARVFKE-AKGVEVQLPVERMTYQEAIRRFGVDNPDLRFGLELVEL 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+    S F+VF+++ + N G  +  I AKG    +R   + +  +    G  GLAY+  
Sbjct: 307 TDIVKGSGFKVFNEV-AANGGI-IKGINAKGCATFSRKDIEDLTSFVSIYGAKGLAYV-- 362

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++   G      P+ K        A+      ++GD   F+A  P          RN +A
Sbjct: 363 KVTAEG---WQSPITKFFTEAEIAAMNGSFGAEEGDLLLFVADKPKVVNDSLGKLRNQLA 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             L + + N F F WI DFP +EW+E++K+    H+PFT P         +D    +A  
Sbjct: 420 SLLKLTDPNVFRFVWITDFPLFEWDEDDKRWCAVHHPFTAPMDEDVDYVESDPGRCRAKA 479

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H   V    F  +G S+E    +FG L  A + G PPHGGIA 
Sbjct: 480 YDLVLNGNEIGGGSIRIHQEHVQSLMFKMLGHSEEDKRAKFGFLLDALEYGTPPHGGIAF 539

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR++MLL G+ ++R+V  FP +Q    L+  +PS V  +QLRELG+R+ 
Sbjct: 540 GMDRLIMLLTGSDSIRDVIAFPKTQKGTCLMSEAPSAVDAKQLRELGVRLA 590


>gi|320323055|gb|EFW79144.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320329673|gb|EFW85662.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330877982|gb|EGH12131.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 591

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGTIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   G     R+  D   ++    G  GLAYI   
Sbjct: 300 DQLTGVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K +   N   I  R+   DGD  FF A D  K  S A  A R  I 
Sbjct: 359 ERAKGPEGLQSPIVKFIPEDNLNVILDRVGAVDGDIVFFGA-DKFKIVSEALGALRIKIG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L +  C  +   W++DFP +E N ++      H+PFT P+   E L+ N   ++ +  
Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFTALHHPFTAPKCTPEELEANPATAL-SRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A 
Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|205355490|ref|ZP_03222261.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205346724|gb|EDZ33356.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 615

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/598 (41%), Positives = 351/598 (58%), Gaps = 22/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+ +    EIA
Sbjct: 34  RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 93

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120
            + R+E+VL  +G +  R    IN  + TG+IE+   K   L++  E  +P F   +   
Sbjct: 94  SNARNEFVLIAEGTIRPRGEGLINPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 150

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+
Sbjct: 151 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 210

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 211 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIE 269

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF EQ D++N  E  L+ +F+  + G  +   F ++ Y DA+  YG+DKPDLR  +   
Sbjct: 270 MSFCEQKDVINVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 327

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+
Sbjct: 328 DVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 387

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  ++ E G     GP+ K  +  +   +  R +++ GD  FF AG       +    R 
Sbjct: 388 I--QVKEDG---LKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 442

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A EL +I+ N  EF W++DFP +E N ++      H+PFTMP+   E+    DL  I 
Sbjct: 443 FLANELKLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 497

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGG
Sbjct: 498 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 557

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR++ML+ GA N+REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 558 IAIGLDRLIMLVTGANNIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 615


>gi|301384823|ref|ZP_07233241.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302063523|ref|ZP_07255064.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302130613|ref|ZP_07256603.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
          Length = 591

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E    +    +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVL--DVEFGDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   G     R+  D   ++    G  GLAYI   
Sbjct: 300 DQLNAVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K +   N   I  R+   DGD  FF A D  K  S A  A R  I 
Sbjct: 359 ERAKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIKIG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L +  C  +   W++DFP +E N ++      H+PFT P+   E L+ N   ++ +  
Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCTPEELEANPATAL-SRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A 
Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|218246650|ref|YP_002372021.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|226736532|sp|B7JX16|SYD_CYAP8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218167128|gb|ACK65865.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 598

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 250/604 (41%), Positives = 362/604 (59%), Gaps = 23/604 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CGDL  +D+   V L GWV R R HGG+IF+D+RD  GI Q+V++P      +  A
Sbjct: 2   RTHYCGDLRATDIEQTVTLFGWVDRRRDHGGVIFIDLRDRTGIVQIVSDPQRTPDSYPDA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG-EREY 120
           +++R+E+V+ I G V  R  E++N  I TG++E+ A  IE+L+ V ++LP  +   E E 
Sbjct: 62  ETLRNEYVVKIVGRVSQRPPESLNPKIPTGEVEIYANSIELLNGVNKQLPFVISSLEAEL 121

Query: 121 -PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178
             E +R KYR+LDLRRD + KN+  R  ++ +MR  +  E  F+E  TPILT S+PEGAR
Sbjct: 122 VREDVRLKYRYLDLRRDRMAKNLQLRHAVVKAMRRYLEDEQQFMEIETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR N G +YALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRANPGQWYALPQSPQLFKQLLMVAGCDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +++IL   E ++  +F+   N + +   F R+ Y  A+ +YG D+PD R  + 
Sbjct: 241 MEMSFMSEEEILRLNEGLVCHIFKSVKNLD-IPRPFPRLTYAKAMEKYGNDRPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN------RAFCDRMNEWARSQG 352
           + +V++    S F+VFS+  +V  G +V  +P  GG         +   D   E A   G
Sbjct: 300 LVDVSDIVKDSGFKVFSE--AVKTGGKVKILPVPGGNETISNVRIKPGGDLFRE-ATEAG 356

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
             G+AYI  R+ E   +  +G +  +L       +  R   + GD   F AGD       
Sbjct: 357 AKGIAYI--RVKEDNKLDTIGAIKDNLTEDQKLELLARTGAKSGDLLLFGAGDTDTVNKS 414

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
            +  R  I ++LG+I+       WI +FP +EWN +EK+++  H+PFT P    E L  +
Sbjct: 415 LSRLRLVIGEQLGLIDPEKINLLWITEFPMFEWNADEKRLEALHHPFTAPNP--EDL--D 470

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DL + +A  YDLV NG E+  G +R +  +V  + F+ +G+S E   N+FG L  AF+ G
Sbjct: 471 DLKTARAQAYDLVYNGVEVGGGSLRIYQKDVQEKVFATIGLSMEEAYNKFGFLLEAFEYG 530

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G+DR+VMLL G  ++R+V  FP +Q    LL  +P+TV  +QL+EL ++  
Sbjct: 531 TPPHGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQASCLLTEAPATVDEKQLKELQVKST 590

Query: 593 ENPK 596
             PK
Sbjct: 591 YKPK 594


>gi|66044654|ref|YP_234495.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|257487013|ref|ZP_05641054.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289626493|ref|ZP_06459447.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|298488212|ref|ZP_07006248.1| Aspartyl-tRNA synthetase; Aspartyl-tRNA(Asn) synthetase
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|302187160|ref|ZP_07263833.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
 gi|81308434|sp|Q4ZWL5|SYD_PSEU2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|63255361|gb|AAY36457.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Pseudomonas
           syringae pv. syringae B728a]
 gi|298157270|gb|EFH98354.1| Aspartyl-tRNA synthetase; Aspartyl-tRNA(Asn) synthetase
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|330868609|gb|EGH03318.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330950612|gb|EGH50872.1| aspartyl-tRNA synthetase [Pseudomonas syringae Cit 7]
 gi|330968894|gb|EGH68960.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
 gi|330988966|gb|EGH87069.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331009344|gb|EGH89400.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 591

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   G     R+  D   ++    G  GLAYI   
Sbjct: 300 DQLTGVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K +   N   I  R+   DGD  FF A D  K  S A  A R  I 
Sbjct: 359 ERAKGPEGLQSPIVKFIPEDNLNVILDRVGAVDGDIVFFGA-DKFKIVSEALGALRIKIG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L +  C  +   W++DFP +E N ++      H+PFT P+   E L+ N   ++ +  
Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFTALHHPFTAPKCTPEELEANPATAL-SRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A 
Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|57236953|ref|YP_178754.1| aspartyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|62287516|sp|Q5HVD1|SYD_CAMJR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|57165757|gb|AAW34536.1| aspartyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058054|gb|ADT72383.1| Aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 583

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/598 (41%), Positives = 351/598 (58%), Gaps = 22/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+ +    EIA
Sbjct: 2   RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120
            + R+E+VL  +G +  R    IN  + TG+IE+   K   L++  E  +P F   +   
Sbjct: 62  SNARNEFVLIAEGTIRPRGEGLINPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF EQ D++N  E  L+ +F+  + G  +   F ++ Y DA+  YG+DKPDLR  +   
Sbjct: 238 MSFCEQKDVINVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFNLKFI 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+
Sbjct: 296 DVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  ++ E G     GP+ K  +  +   +  R +++ GD  FF AG       +    R 
Sbjct: 356 I--QVKEDG---LKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A EL +I+ N  EF W++DFP +E N ++      H+PFTMP+   E+    DL  I 
Sbjct: 411 FLANELKLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGG
Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR++ML+ GA N+REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 526 IAIGLDRLIMLVTGANNIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|213969182|ref|ZP_03397321.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|213926180|gb|EEB59736.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 590

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 2   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 62  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E    +    +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 241 LNEEDIIGLTEKMVRQLFKEVL--DVEFGDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   G     R+  D   ++    G  GLAYI   
Sbjct: 299 DQLNAVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K +   N   I  R+   DGD  FF A D  K  S A  A R  I 
Sbjct: 358 ERAKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIKIG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L +  C  +   W++DFP +E N ++      H+PFT P+   E L+ N   ++ +  
Sbjct: 417 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCTPEELEANPATAL-SRA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A 
Sbjct: 474 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 534 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 588


>gi|297539708|ref|YP_003675477.1| aspartyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297259055|gb|ADI30900.1| aspartyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 594

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/594 (40%), Positives = 363/594 (61%), Gaps = 15/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG L    +G  V L GW HR R HGG+IF+D+RD  G+ Q+V NPD+ A F IA+
Sbjct: 2   RTHYCGHLNREHIGQTVTLCGWAHRRRDHGGVIFIDLRDREGMAQIVINPDAKAAFAIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVRSE+VL +  +V +R     NAN+ TG++E+ A +IEIL+ +   P  +  E    E+
Sbjct: 62  SVRSEYVLKVTCVVQARPEGATNANLATGEVEMIATEIEILNASLTPPFQLDDE-NLTET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R ++R++DLRR  + KN++ R ++  ++R  +    FIE  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLQHRYIDLRRPAMQKNMMLRYKVSKNLRDYLDDNGFIEVETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHHGMFFALPQSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++ I++ +E ++R + ++  N + +   F R+ +  A+ RYG+DKPD+R  + +  ++
Sbjct: 240 MTENQIMDIVEEMIRQMLKKVQNVD-LPAAFPRMSFHKAMTRYGSDKPDMRVTLEITELS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI--- 359
           +     +F+VF+   ++  G  V A+   GG    R+  D   E+ +  G  GLAYI   
Sbjct: 299 DVMKDVDFKVFAGAANMVGG-RVAALRVPGGAAIARSEIDAYTEFVKIYGAKGLAYIKIN 357

Query: 360 -FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
              +L+E G      P+ K++++   +AI  R   Q+GD  FF   D  K  + A  A R
Sbjct: 358 DVTKLNEEGL---QSPIVKNIHVTALQAIIDRTGAQNGDIVFF-GADKSKVVNEALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  + G ++   +   W++DFP +E +EE  +    H+PFT P+ G E L   +  + 
Sbjct: 414 LKVGHDKGHVDGRAWAPLWVVDFPMFEHDEENDRWAALHHPFTAPKDGHEDLLVTNPGAA 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD+V NG+E+  G +R H  +V  + F  + ISKE  + +FG L  A Q G PPHG
Sbjct: 474 LSKAYDMVLNGWEVGGGSVRIHKQDVQSKVFDALKISKEEAQEKFGFLLDALQYGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR+V L+ GA+++R+V  FP +Q    L+  +P+ V  +QLREL +R+
Sbjct: 534 GLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLMTNAPNEVDEKQLRELHIRV 587


>gi|218439984|ref|YP_002378313.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|226736531|sp|B7KB89|SYD_CYAP7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218172712|gb|ACK71445.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 595

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/608 (40%), Positives = 359/608 (59%), Gaps = 31/608 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CGDL  SD+   V L GWV R R HGG+IF D+RD  G  Q+V++P      ++ A
Sbjct: 2   RTHYCGDLRASDIDKTVTLFGWVDRYRDHGGVIFADLRDRTGRVQIVSDPQRTPESYQAA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGERE-- 119
            ++R+E+V+ ++G V  R  E++N  I TG++E+ A  IEIL+ V ++LP  +  E    
Sbjct: 62  ANLRNEYVIKVEGRVSKRPKESLNPKIPTGEVEIYADSIEILNGVNKQLPFVISSEDAEL 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRRD + KN+  R +++ +MR  +   +NF+E  TPILT S+PEGAR
Sbjct: 122 VREEVRLKYRYLDLRRDRMRKNLQLRHQVVQAMRRYLEDQQNFMEVETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR N G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRTNPGKWYALPQSPQLFKQLLMVSGVDRYYQIARCFRDEDNRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+  D+IL+  E ++  VF+   N + +   F R+ Y +A+ +YG D+PD R  + 
Sbjct: 241 MEMSFMSFDEILDLNEGLIAHVFKTVKNID-IPRPFPRLTYAEAMEKYGIDRPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA----------KGGGGNRAFCDRMNEWA 348
           + +V+E    S F+VFS  +      +V  IP           K GG        + + A
Sbjct: 300 LVDVSEIVKDSGFKVFSGAVKSGGIVKVLPIPEATNIISNVQIKPGG-------ELFKEA 352

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
              G  G+AYI  R+ ++  +  +  +  +L     + +  +   + G    F AGD   
Sbjct: 353 TEAGAKGIAYI--RIKDNNELDTIAAIKDNLTDEQKQELIEKTGAKPGHLLLFGAGDTDT 410

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                A  R  + ++LG+I+ +     W+ DFP +EWN EEK+++  H+PFT P+   E 
Sbjct: 411 VNKSLARLRLVVGEKLGLIDEDKINLLWVTDFPMFEWNAEEKRLEALHHPFTAPKP--ED 468

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +  NDL   +A  YD++ NG E+  G +R +  ++  + FS +G+S E   N+FG L  A
Sbjct: 469 I--NDLPHARALAYDMIFNGIELGGGSLRIYQRDIQEKVFSTIGLSMEEAYNKFGFLLEA 526

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           F+ G PPHGGIA G+DR VMLL   +++R+V  FP +Q    LL  +PSTV  +QL+EL 
Sbjct: 527 FEYGTPPHGGIAYGLDRFVMLLAKEESIRDVIAFPKTQQASCLLTEAPSTVEPKQLKELH 586

Query: 589 LRIVENPK 596
           +     PK
Sbjct: 587 IASTFKPK 594


>gi|315658100|ref|ZP_07910972.1| aspartate--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315496429|gb|EFU84752.1| aspartate--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 588

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/592 (41%), Positives = 351/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +    +G  + L GWVH  R  GG+IF+D+RD  GI Q+V NP        IA
Sbjct: 4   RTTYCGLVTEELLGEKITLKGWVHNRRDLGGLIFIDLRDREGIVQIVFNPAFSQEALNIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
           ++VRSE+V+ + G V  R  ETIN  I TGQ+E+    IE+++ +E  P  +  E +   
Sbjct: 64  ETVRSEYVVEVQGQVTKRDPETINPKIKTGQVEVQVSHIEVINKSETPPFSINEENQNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +I  S+R  +    F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRTELAQTFKMRHQITQSIRHYLDNNGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +LR V ++   G  V   F R+ Y++A+ RYG+DKPD R  + + +
Sbjct: 243 SFVDQEDVMAMGEEMLRKVVKDVK-GIDVEGPFPRMTYNEAMSRYGSDKPDTRFDMELID 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF    +VN   +V AI AKG   N  R   D + E+    G  GLA++
Sbjct: 302 VSKLGTEMDFKVFKD--TVNQNGQVKAIVAKGAADNYTRKDMDGLTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+A+     N   +      + GD   F+A  P          R  
Sbjct: 360 --KVVEEGL---SGPIARFFEDANVATLTELTGAEPGDLVMFVADKPNVVAQSLGALRIK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+        ++  + +A
Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEEDIKKLDSEPENAQA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  ++  + F  +G +KE  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHHGDLQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +PS VS +QL+EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPSDVSDKQLQELSLRI 586


>gi|330872656|gb|EGH06805.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 591

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/595 (41%), Positives = 357/595 (60%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   G     R+  D   ++    G  GLAYI   
Sbjct: 300 DQLNAVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K +   N   I  R+   DGD  FF A D  K  S A  A R  I 
Sbjct: 359 ERAKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIKIG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L +  C  +   W++DFP +E N ++      H+PFT P+   E L+ N   ++ +  
Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCTPEELEANPATAL-SRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A 
Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|77460632|ref|YP_350139.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|97196812|sp|Q3K7V6|SYD_PSEPF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|77384635|gb|ABA76148.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 591

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/595 (41%), Positives = 356/595 (59%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDRDGLAQVVFDPDRAESFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R A   NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKITGKVRLRPAGATNANMASGMIEVLGYELEVLNESETPPFPLNEFSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRFLDLRR  + + +  R+R+  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFLDLRRPEMAEKLRLRSRMTTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI+   E ++R +F+E    +     F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LDEKDIMGLTEGMIRNLFKEVL--DLEFGEFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   + A+   GG    R   D   ++    G  GLAYI   
Sbjct: 300 DQLKEVDFKVFSGPAN-DPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+ K++   N   I  R+   DGD  FF A D  K  S A  A R  + 
Sbjct: 359 ERAAGVEGLQSPIVKNIPEANLNVILDRVGAVDGDIVFFGA-DKAKIVSEALGALRIKLG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L ++ C  +   W++DFP +E N ++      H+PFT P+   E L+ N   ++ +  
Sbjct: 418 HDLKLLTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCSPEELEANPAGAL-SRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F  +GI++   E +FG L  A + G PPHGG+A 
Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGINEAEQEEKFGFLLDALKYGAPPHGGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLRETPK 589


>gi|289550605|ref|YP_003471509.1| Aspartyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289180137|gb|ADC87382.1| Aspartyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 588

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/592 (41%), Positives = 350/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +    +G  + L GWVH  R  GG+IF+D+RD  GI Q+V NP        IA
Sbjct: 4   RTTYCGLVTEELLGEKITLKGWVHNRRDLGGLIFIDLRDREGIVQIVFNPAFSQEALNIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
           ++VRSE+V+ + G V  R  ETIN  I TGQ+E+    IE+++ +E  P  +  E +   
Sbjct: 64  ETVRSEYVVEVQGQVTKRDPETINPKIKTGQVEVQVSHIEVINKSETPPFSINEENQNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +I  S+R  +    F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRTELAQTFKMRHQITQSIRHYLDNNGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +LR V +E   G  V   F R+ Y++A+ RYG+DKPD R  + + +
Sbjct: 243 SFVDQEDVMAMGEEMLRKVVKEVK-GIDVEGPFPRMTYNEAMSRYGSDKPDTRFDMELID 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF    +VN   +V AI AKG   N  R   D + E+    G  GLA++
Sbjct: 302 VSKLGTEMDFKVFKD--TVNQNGQVKAIVAKGAADNYTRKDMDGLTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+A+     N   +      + GD   F+A  P          R  
Sbjct: 360 --KVVEEGL---SGPIARFFEDANVATLTELTGAEPGDLVMFVADKPNVVAQSLGALRIK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+        ++  + +A
Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEEDIKKLDSEPENAQA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H   +  + F  +G +KE  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHHGVLQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +PS VS +QL+EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPSDVSDKQLQELSLRI 586


>gi|311069240|ref|YP_003974163.1| aspartyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310869757|gb|ADP33232.1| aspartyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 592

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/593 (41%), Positives = 357/593 (60%), Gaps = 16/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CGD+    +G  V+L GWV + R  GG+IF+D+RD  GI QVV NPD++    EIA
Sbjct: 4   RTFYCGDITEKAIGETVKLKGWVQKRRDLGGLIFIDLRDRSGIVQVVFNPDASKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           + +R+E+VL I G V++R   T+N N+ TG IE+ A ++ +LS A+  P  +  +  E  
Sbjct: 64  EGIRNEYVLDIQGTVVAREEGTVNKNLKTGAIEIHADEVAVLSAAKTPPFAISDQADEVS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R K+R+LDLRR  +   +  R  +  ++R  +    F++  TPILT SSPEGARD+L
Sbjct: 124 EDVRLKHRYLDLRRPAMFNTLQMRHNVTKAVRHFLDENGFLDIETPILTKSSPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMVSGVDRYYQIARCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q++I+   E+++  V  E + G  VS    R+ Y+DA+  YG+DKPD R  +++ +
Sbjct: 243 SFMSQEEIMALAEDMMAKVMRE-TKGVEVSLPLPRMTYEDAMNLYGSDKPDTRFAMLLTD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           V++    +EF+VFS   +V  G  V AI  KG   +  R   D +  +A + G  GLA++
Sbjct: 302 VSDIVKDTEFKVFSS--AVANGGVVKAINVKGAAADYSRKDIDALGAFAANYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
             ++++ G     GP+AK  +      +   LD  DGD   F A D  +  + +  A R 
Sbjct: 360 --KVEQEGV---KGPIAKFFDEEKQAKLIKSLDANDGDLLLFGA-DQFEVVAQSLGALRL 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +E G+I+ + F F W++D+P  E + EE +   AH+PFTMP      L      ++K
Sbjct: 414 KLGKERGLIDESLFNFLWVIDWPLLEHDAEEGRFYAAHHPFTMPVREDLDLVDTAPENMK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+  G IR    E+  + F  +G +KE    +FG L  AF+ G PPHGG
Sbjct: 474 AQAYDLVLNGYELGGGSIRIFEKEIQEKMFKLLGFTKEEAHEQFGYLMEAFEFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IA G+DR+VMLL G  N+R+   FP + +   L+  +P  VS  QL EL L +
Sbjct: 534 IALGLDRLVMLLAGRTNLRDTIAFPKTASASCLMTDAPGEVSEAQLDELHLAV 586


>gi|314933794|ref|ZP_07841159.1| aspartate--tRNA ligase [Staphylococcus caprae C87]
 gi|313653944|gb|EFS17701.1| aspartate--tRNA ligase [Staphylococcus caprae C87]
          Length = 588

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/592 (41%), Positives = 352/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD      ++A
Sbjct: 4   RTTYCGLVTEDLLDEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALKVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ + G+V  R  ETIN  I TGQ+E+    IEI++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVQGVVTKRDPETINPKIKTGQVEVQVSNIEIINKSETPPFAINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDDNGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D+++  E +LR V ++   G  V  +F R+ Y +A+ RYG+DKPD R  + + N
Sbjct: 243 SFVDQEDVISMGEEMLRKVVKDV-KGIDVEESFPRMTYAEAMDRYGSDKPDTRFDMELIN 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF   +  N G E+ AI A+G      R   D + E+    G  GLA++
Sbjct: 302 VSQLGKDMDFKVFKDTVE-NEG-EIKAIVAEGAADQYTRKDMDSLTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+A+     N   ++     + GD   F+A  P          R  
Sbjct: 360 --KVVEDGL---SGPIARFFEDANVGTLKTLTGAKPGDLVMFVADKPSVVAQSLGALRIK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+ +   F W+ D+P  E++E+ K+   AH+PFT P+    S   ++  +++A
Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKQEDISKLDSEPENVQA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G S E  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFSTEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLEELSLRI 586


>gi|320120308|gb|EFE28550.2| aspartate--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 592

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 250/591 (42%), Positives = 357/591 (60%), Gaps = 15/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RT+ C DL +S V   V L GWV R R  GG+IFLD+RD  GI QV    N  +  F  A
Sbjct: 9   RTNYCNDLTMSFVEKEVVLMGWVQRARDLGGLIFLDLRDRTGIVQVAFDINDSAENFSKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K + SE+V+ I G+V  RS++  N NI TG IE+ A+++ IL+ A+  P+ +  +    E
Sbjct: 69  KELGSEYVIAIRGVVKERSSK--NNNIATGDIEVFAKELRILNTAKTPPIYIKDDDIVSE 126

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR+  +  N + R ++  S+R  +  E F+E  TPILT  +PEGARD+LV
Sbjct: 127 DLRLKYRYLDLRKPKMQYNFLMRHKVTQSVRNFLSKEGFLEIETPILTKPTPEGARDYLV 186

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN+G FYALPQ+PQ +KQLLM SG DRYFQIA CFRDED R+DR P EF Q+D EMS
Sbjct: 187 PSRVNKGHFYALPQSPQLFKQLLMTSGMDRYFQIAKCFRDEDLRADRQP-EFTQIDCEMS 245

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE DD+L+  E +++ VF E  N   +   F R+ + +A+ RYG+DKPD+R    +++V
Sbjct: 246 FVEIDDVLDVTERLMKTVFHEVLNME-IQTPFKRMKWQEAMDRYGSDKPDIRFGFEINDV 304

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++      F+VF +  +V  G  V AI   G     +R   D + E A++ G  GLA++ 
Sbjct: 305 SDIVKDCGFKVFDE--AVLSGGTVRAINLNGYEAEFSRKSIDALGETAKTYGAKGLAWM- 361

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ ESG  +   P+AK L+     +I  ++  + GD   F+A   +   +     R   
Sbjct: 362 -RVTESGINS---PIAKFLSEDVLNSIVEKMGAKKGDLLLFVADKTMTALTSLGHIRLEA 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++LG+I+ N F F ++++FP YE+NEEE +   AH+PFT P      L  +   ++ A 
Sbjct: 418 AKKLGVIDENEFAFLYVVEFPLYEYNEEENRYVAAHHPFTAPIDEDLKLFNSSPENMHAK 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  +V  + F  +G +KE  E +FG L  AFQ G PPHGGIA
Sbjct: 478 AYDIVLNGIELGGGSIRIHTKDVQDKMFEALGFTKEEAEEKFGFLLNAFQYGTPPHGGIA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR++ML+L   N+REV  FP +QN    +  +P+      L+ELG+ +
Sbjct: 538 FGLDRLLMLMLKRDNIREVIAFPKNQNAICPMTEAPAIADKNALQELGIEL 588


>gi|322376004|ref|ZP_08050514.1| aspartate--tRNA ligase [Streptococcus sp. C300]
 gi|321278954|gb|EFX55997.1| aspartate--tRNA ligase [Streptococcus sp. C300]
          Length = 587

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEMTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMSLYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  + +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQAD-LTAALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQDETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|313894864|ref|ZP_07828424.1| aspartate--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312976545|gb|EFR42000.1| aspartate--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 602

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/597 (40%), Positives = 357/597 (59%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH CG L    VG  V L GWV R R HGG+IF+D+RD  G+ Q+V   A      F  
Sbjct: 9   RTHGCGTLRKEHVGGEVSLCGWVSRRRDHGGLIFVDMRDRSGLVQIVFDEAVMAGGTFHD 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++RSE+V+ + G V +RSA+T+N N+ TG++E+   ++ IL+ A+  P  +    +  
Sbjct: 69  AEALRSEFVIAVRGNVRARSADTVNPNMETGEVEIVVSELRILNKAKTPPFYIQDGIDVD 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR +YR+LDLRR  +  NI+ R R+   MR       F+E  TP+L  S+PEGARDFL
Sbjct: 129 EMIRLRYRYLDLRRPEMQANIMLRHRVAKIMRDFFDRSGFLEIETPMLCKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM SGF++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 189 VPSRLNAGEFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQP-EFTQLDIEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++Q+ IL+ ME +++ VFE+ + G  +     R+ +D+A+ R+G+DKPDLR  + + +
Sbjct: 248 SFMDQESILSLMEELVKEVFEK-TLGAHIETPLPRMSWDEAMERFGSDKPDLRFGMELRD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +TE+   SEF+VF+ ++    G  V  I  +G     R   D +  + ++ G  GLA+I 
Sbjct: 307 ITEYVGGSEFKVFNAVMEA--GGRVKVINVEGYANIPRRELDGLVTYVQNYGAKGLAWIQ 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E G  +   P  K       E I+  +  + GD    +A  P        + R  +
Sbjct: 365 Y--TEEGVKS---PFKKFYADETFETIKNAVGAKTGDLLLVVADQPAVVAQALGELRLEM 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +  G+I+ +   F W++DFP +E++ EEK+    H+PFT P+     +   D   +KA 
Sbjct: 420 GRRRGLIDPDALSFLWVVDFPMFEYSAEEKRYKAMHHPFTAPRDEDIPMLATDPGKVKAN 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R + S++  Q F  +G+S E    +FG +  AF+ G PPHGG+A
Sbjct: 480 AYDMVLNGVEIGGGSLRIYRSDLQEQVFETLGLSPEEAREKFGFMMNAFEYGTPPHGGLA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QLREL +R     KK
Sbjct: 540 FGLDRLVMLMAKRRSIRDVIPFPKTQSASDVMCQAPSPVDEKQLRELYIRTAVPKKK 596


>gi|330964821|gb|EGH65081.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 591

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/595 (41%), Positives = 356/595 (59%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   G     R+  D    +    G  GLAYI   
Sbjct: 300 DQLNAVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTRFVSIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K +   N   I  R+   DGD  FF A D  K  S A  A R  I 
Sbjct: 359 ERAKGAEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIKIG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L +  C  +   W++DFP +E N ++      H+PFT P+   E L+ N   ++ +  
Sbjct: 418 NDLKLHTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCTPEELEANPATAL-SRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A 
Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|51893559|ref|YP_076250.1| aspartyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|62287548|sp|Q67LP0|SYD_SYMTH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|51857248|dbj|BAD41406.1| aspartyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 593

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/596 (41%), Positives = 351/596 (58%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           RT  CG++  + VG  V ++GWV R R HG +IF+D+RD  G+ QVV + +   +  F  
Sbjct: 3   RTVYCGEVTDALVGQEVTVNGWVQRRRDHGSLIFVDLRDRTGLVQVVFDVEECGADLFRK 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VRSE+VL + G ++ R+ E +N NI TG+ E+ A  + ILS A+  P  +  + +  
Sbjct: 63  AEQVRSEYVLAVRGRLVHRTPEAVNPNIPTGRFEIRALDLRILSPAKTPPFYIQDDLDVD 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  + +N++ R R+  ++R       F+E  TP+LT S+PEGARD+L
Sbjct: 123 ETVRLKYRYLDLRRPEMQRNLILRHRVTKAVRDFFDEHGFLEIETPMLTKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ +KQL M SG +RY QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 183 VPSRVNPGKFYALPQSPQIFKQLCMVSGLERYVQIVRCFRDEDLRADRQP-EFTQIDVEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE+DD+L+ ME ++  VF + + G  V   F R+ Y +A+ RYG+DKPDLR  + + +
Sbjct: 242 SFVERDDVLSMMEQMVARVFRD-ALGVEVPTPFKRLTYAEAMARYGSDKPDLRFGMELVD 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360
           V++      F VF    +V  G +V  I AKG GG +R   D + E+ ++    GLAYI 
Sbjct: 301 VSDVAAGCGFGVFKG--AVEAGGQVKGINAKGCGGYSRKQIDELTEFVKTYKAKGLAYI- 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             L E G V       K L    T  I  RL+ + GD   F+A  P    +     R  +
Sbjct: 358 -ALGEGGEV--RSSFTKFLTEAETAEIVRRLEGEPGDLLLFVADQPDVVAAALGALRVEM 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG------MESLKGNDL 474
              LG+     F   W++DFP  EW+EEE +    H+PFT P          E     +L
Sbjct: 415 GNRLGLRKPGEFNLLWVIDFPLLEWDEEENRFVAVHHPFTSPHPEDLDKVFKEGATREEL 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +I+A  YDLV NG E+  G IR H   +  + F  +G + E  + +FG L  AF+ G P
Sbjct: 475 AAIRANAYDLVLNGVELGGGSIRIHQRPLQNRMFELLGFTPEEAQAKFGFLLEAFEYGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           PHGGIA G+DR VMLL G +++R+V  FP +    DL+  +PS V+ +QL+EL +R
Sbjct: 535 PHGGIAFGLDRFVMLLAGRQSIRDVIAFPKTAKATDLMTDAPSEVAPKQLQELHIR 590


>gi|152990518|ref|YP_001356240.1| aspartyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|151422379|dbj|BAF69883.1| aspartyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 589

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/597 (40%), Positives = 349/597 (58%), Gaps = 17/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  C +L   D+G  V L GW +  R HGG+IF+D+RD  G+ Q+V +P  +    +IA
Sbjct: 2   RTDYCAELNEKDIGKEVVLCGWANSYRDHGGVIFIDLRDKTGLVQLVCDPADSKEAHKIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL   G V  R     N  + TG+IE+   ++ I + +E LP  + G+    E
Sbjct: 62  TRVRDEYVLIAKGKVRLRGEGLENPKLKTGKIEVVVDELVIENESEPLPF-LIGDNTVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLR          R+++  + R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 121 EIRLKYRYLDLRTKEAFNTFELRSKVAIAARNFLDKNGFLEVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRLYPGEFYALPQSPQLFKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  +D+++   E +++ +FE  + G  V     R+ Y +A+ +YG+DKPDLR  + + +V
Sbjct: 240 FCTEDEVIEVAEGLIKSIFE--AAGVEVKTPIRRMPYKEAMEKYGSDKPDLRFGLELVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            + F ++E +VF  I        + A+P KGG     R   D +  +    G  GLA++ 
Sbjct: 298 IDIFENTELKVFRDIAQYKKLNRIKALPVKGGADALTRKDIDALTSFVAKFGAKGLAWV- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ E G++   GP+ K L+    +A+  R  ++ GD  FF AG       +    RN +
Sbjct: 357 -KVKEDGDL--QGPIVKFLSDEEKKALVDRCAVETGDLIFFGAGPKKIVLDYMGRLRNEV 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++LG+I+ + FEF WI+DFP +E  E E KI   H+PFTMP+    ++   D  ++ + 
Sbjct: 414 AKKLGLIDHDRFEFVWIVDFPMFEIEEGEVKIKALHHPFTMPK----NIDTEDYEAMTSQ 469

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  E+  + F  +GI  E  + +FG L  A + G PPHGG A
Sbjct: 470 AYDIVLNGVELGGGSIRIHKPEIQKKIFEILGIGDEEAKEKFGFLLDALKFGAPPHGGFA 529

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G DR+VMLL    N+R+V  FP +Q    LL  +PS V  EQL+EL +RI E PKK
Sbjct: 530 LGFDRLVMLLTKRDNIRDVIAFPKTQKAQCLLTQAPSKVDPEQLKELHIRIRE-PKK 585


>gi|260887818|ref|ZP_05899081.1| aspartate--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|330838613|ref|YP_004413193.1| aspartyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|260862424|gb|EEX76924.1| aspartate--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|329746377|gb|AEB99733.1| aspartyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 599

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 236/589 (40%), Positives = 359/589 (60%), Gaps = 11/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RT  CG+L   DVG+ V LSGWV R R HGG+IF+D+RD  G  QVV   A      F  
Sbjct: 9   RTRHCGELREGDVGAEVVLSGWVSRRRDHGGLIFVDMRDRSGFVQVVYDEAAMGKEAFHK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++R+E+V+ + G V +RS +T+N +I TG+IE+  +++ IL+ A+  P  +    +  
Sbjct: 69  AETLRNEFVIGVRGKVRARSEDTVNPHIETGKIEVVCEELRILNTAKTPPFYIQDNIDVD 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  +  N++ R R+   MR  +    FIE  TP+L  S+PEGARDFL
Sbjct: 129 ETLRLKYRYLDLRRPEMQANLMLRHRVTKIMRDFLDRHEFIEIETPMLCKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQ+LM +GF++YFQI  CFRDED R+DR P EF QLD+E 
Sbjct: 189 VPSRLNPGKFYALPQSPQIFKQILMVAGFEKYFQIVRCFRDEDLRADRQP-EFTQLDIET 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++++DIL  ME ++  +F++ + G  +   FLR+ +D+A+ R+G+DKPDLR  + + +
Sbjct: 248 SFLDENDILELMEGLVAELFDK-TLGIKLETPFLRMKWDEAMERFGSDKPDLRFGMELMD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E+   S+F+VFS +L      +V  +        R   D + ++ +  G  GLA+I +
Sbjct: 307 ISEYVKGSDFKVFSSVLENGGQVKVINVEDYANIPRREL-DGLVQYVQGYGAKGLAWIQY 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E G  +   P  K       E I+     + GD    IA  PL       + R  +A
Sbjct: 366 --TEEGVKS---PFKKFYADEVFEKIKEACHAKTGDLLLVIADKPLVVAQALGELRLEMA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +  G+I+ +  +F W+ DFP +E+NEEEK+    H+PFT P+        +D   +KA  
Sbjct: 421 RRRGLIDADALKFLWVTDFPMFEYNEEEKRWKAMHHPFTAPRREDVEYLMSDPGRVKANA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R +  ++  + F  +G+++E    +FG +  AF+ G PPHGGIA 
Sbjct: 481 YDMVLNGVEIGGGSLRIYQGDLQEKVFEAIGLTQEEARQKFGFMMDAFEYGTPPHGGIAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QLREL +R
Sbjct: 541 GLDRLVMLMAKRRSIRDVIAFPKTQSASDVMSHAPSEVDAKQLRELYVR 589


>gi|225861929|ref|YP_002743438.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298231028|ref|ZP_06964709.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254087|ref|ZP_06977673.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298501615|ref|YP_003723555.1| aspartate--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|254781758|sp|C1CU16|SYD_STRZT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225727479|gb|ACO23330.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237210|gb|ADI68341.1| aspartate--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|327388849|gb|EGE87197.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 587

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRVKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|225859869|ref|YP_002741379.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|254781753|sp|C1CAU1|SYD_STRP7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225721728|gb|ACO17582.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 587

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRVKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|219669604|ref|YP_002460039.1| aspartyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219539864|gb|ACL21603.1| aspartyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 592

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/587 (41%), Positives = 347/587 (59%), Gaps = 11/587 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT S G L +S  G+ + L GWV R R HGG+IF+D+RD  G  QVV NPD   F  A+ 
Sbjct: 7   RTES-GSLRLSHAGAVIHLLGWVQRRRDHGGVIFVDLRDRSGFVQVVFNPDMPDFAAAER 65

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+ I G V  R     N N+ TG+IE+ A+ + IL+ A+  P  +  + +  E +
Sbjct: 66  LRSEYVVAIKGKVRPRPEGATNPNLETGEIEVVAESLTILNGAKTPPFYIQDDVDVDEMV 125

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  + +    R ++   MR    ++ F E  TP+L  SSPEGARD+LVPS
Sbjct: 126 RLKYRYLDLRRPEMQQVFKIRHQVTQVMRNFFDSQGFYEIETPMLIKSSPEGARDYLVPS 185

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ G FYALPQ+PQ +KQLLM SG ++YFQI  CFRDED R+DR P EF QLD+EMSF 
Sbjct: 186 RVHPGEFYALPQSPQIFKQLLMVSGMEKYFQIVRCFRDEDLRADRQP-EFTQLDVEMSFA 244

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           E +DIL  ME ++  +F+E + G  +   F R+ Y +A+  YG+DKPD+R  + M +V E
Sbjct: 245 EVEDILPMMEELMARIFKE-TIGRDIPRPFPRMTYQEAMELYGSDKPDIRFGMEMVDVAE 303

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
               S F+VF+  L+   G  V A+ AKG  G  R   D + ++    G  GLAYI   L
Sbjct: 304 CVKDSNFKVFTDTLA--KGGRVKALCAKGCAGMPRRELDGLIQFVSIYGAKGLAYIV--L 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G  +   P+AK  +      +  +L  + GD  FF+A             R  + + 
Sbjct: 360 AEEGIKS---PIAKFFSEEQLNGLIAKLKGETGDILFFVADKEAVVADALGHLRLELGKR 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+I  +   F W+ +FP  +W+EE+K+    H+PFT P      L   +   ++A  YD
Sbjct: 417 LGLIPEDALNFLWVTEFPLLQWDEEDKRFVAIHHPFTSPMTEDLPLLPTEPGKVRAKAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  EV  Q F  +G++ E  + +FG L  AF+ G PPHGGIA G+
Sbjct: 477 MVLNGTELGGGSIRIHQREVQEQMFDLLGLTPEEAKAKFGYLLDAFEYGTPPHGGIAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           DR++MLL G  N+R+V  FP +Q+  DL++ +PS+V  +QL+EL ++
Sbjct: 537 DRLIMLLTGKDNIRDVIAFPKTQSASDLMIQAPSSVDEKQLKELHIK 583


>gi|319400956|gb|EFV89175.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 588

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/592 (41%), Positives = 352/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD      ++A
Sbjct: 4   RTTYCGLVTEEFLNEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALQVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ + G+V  R AETIN  I TGQ+E+    IEI++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVQGVVTKRDAETINPKIKTGQVEVQVSNIEIINKSETPPFSINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+DI+   E++LR V ++   G  VS  F R+ Y +A+ RYG+DKPD R  + + N
Sbjct: 243 SFVDQEDIIAMGEDMLRKVVKDVK-GIDVSGPFPRMTYAEAMDRYGSDKPDTRFGMELIN 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++      F+VF    +V+   E+ AI AK       R   D + E+    G  GLA++
Sbjct: 302 VSQLGKEMNFKVFKD--TVDNNGEIKAIVAKDAADKYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ + G     GP+A+     N E ++   + + GD   F+A  P          R  
Sbjct: 360 --KVVDDG---LSGPIARFFEDTNVETLKQLTEAKPGDLVMFVADKPNVVAQSLGALRIK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+ +   F W+ D+P  E++E+ K+   AH+PFT P+         +  +++A
Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEPENVQA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G + E  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFTNEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL+EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLQELSLRI 586


>gi|242242902|ref|ZP_04797347.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233617|gb|EES35929.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 588

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/592 (41%), Positives = 352/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD      ++A
Sbjct: 4   RTTYCGLVTEEFLNEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALQVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ + G+V  R AETIN  I TGQ+E+    IEI++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVQGVVTKRDAETINPKIKTGQVEVQVSNIEIINKSETPPFSINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+DI+   E++LR V ++   G  VS  F R+ Y +A+ RYG+DKPD R  + + N
Sbjct: 243 SFVDQEDIIAMGEDMLRKVVKDVK-GIDVSGPFPRMTYAEAMDRYGSDKPDTRFGMELIN 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++      F+VF    +V+   E+ AI AK       R   D + E+    G  GLA++
Sbjct: 302 VSQLGKEMNFKVFKD--TVDNNGEIKAIVAKDAADKYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ + G     GP+A+     N E ++   + + GD   F+A  P          R  
Sbjct: 360 --KVVDDG---LSGPIARFFEDANVETLKQLTEAKPGDLVMFVADKPNVVAQSLGALRIK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+ +   F W+ D+P  E++E+ K+   AH+PFT P+         +  +++A
Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEPENVQA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G + E  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFTNEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL+EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLQELSLRI 586


>gi|257059692|ref|YP_003137580.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256589858|gb|ACV00745.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 626

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 250/604 (41%), Positives = 363/604 (60%), Gaps = 23/604 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CGDL  +D+   V L GWV R R HGG+IF+D+RD  GI Q+V++P      +  A
Sbjct: 30  RTHYCGDLRATDIEQTVTLFGWVDRRRDHGGVIFIDLRDRTGIVQIVSDPQRTPDSYPDA 89

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG-EREY 120
           +++R+E+V+ I G V  R  E++N  I TG++E+ A  IE+L+ V ++LP  +   E E 
Sbjct: 90  ETLRNEYVVKIVGRVSQRPPESLNPKIPTGEVEIYANSIELLNGVNKQLPFVISSLEAEL 149

Query: 121 -PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178
             E +R KYR+LDLRRD + KN+  R  ++ +MR  +  E  F+E  TPILT S+PEGAR
Sbjct: 150 VREDVRLKYRYLDLRRDRMAKNLQLRHAVVKAMRRYLEDEQQFMEIETPILTRSTPEGAR 209

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR N G +YALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 210 DYLVPSRANPGQWYALPQSPQLFKQLLMVAGCDRYYQIARCFRDEDLRADRQP-EFTQLD 268

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +++IL+  E ++  +F+   N + +   F R+ Y  A+ +YG D+PD R  + 
Sbjct: 269 MEMSFMSEEEILSLNEGLVCHIFKSVKNLD-IPRPFPRLTYAKAMEKYGNDRPDTRFGLE 327

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN------RAFCDRMNEWARSQG 352
           + +V++    S F+VFS+  +V  G +V  +P  GG         +   D   E A   G
Sbjct: 328 LVDVSDIVKDSGFKVFSE--AVKTGGKVKILPVPGGNETISNVRIKPGGDLFRE-ATEAG 384

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
             G+AYI  R+ E   +  +G +  +L       +  R   + GD   F AGD       
Sbjct: 385 AKGIAYI--RVKEDNKLDTIGAIKDNLTEDQKLELLARTGAKSGDLLLFGAGDTDTVNKS 442

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
            +  R  I ++LG+I+       WI +FP +EWN +EK+++  H+PFT P    E L  +
Sbjct: 443 LSRLRLVIGEQLGLIDPEKINLLWITEFPMFEWNADEKRLEALHHPFTAPNP--EDL--D 498

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DL + +A  YDLV NG E+  G +R +  +V  + F+ +G+S E   N+FG L  AF+ G
Sbjct: 499 DLKTARAQAYDLVYNGVEVGGGSLRIYQKDVQEKVFATIGLSMEEAYNKFGFLLEAFEYG 558

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G+DR+VMLL G  ++R+V  FP +Q    LL  +P+TV  +QL+EL ++  
Sbjct: 559 TPPHGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQASCLLTEAPATVDEKQLKELQVKST 618

Query: 593 ENPK 596
             PK
Sbjct: 619 YKPK 622


>gi|217967356|ref|YP_002352862.1| aspartyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|226736535|sp|B8E1C0|SYD_DICTD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|217336455|gb|ACK42248.1| aspartyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 592

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/602 (40%), Positives = 353/602 (58%), Gaps = 35/602 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L   ++G  V LSGWVHR+R HGG+IF+D+RD  GI Q+V +P      ++IA
Sbjct: 3   RTHYCGELNAKNIGEKVYLSGWVHRIRHHGGLIFIDLRDRSGIVQLVFDPSISKESYDIA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +V +EWV+ ++G V  R     N  I TG+IE+  +KI+I + A+ LP  ++  +E  E
Sbjct: 63  DTVGNEWVISVEGKVRKRPEGMENPKIPTGEIEIEVEKIKIENTAKPLPFNLWTNKEIDE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRRD +  NI+ R   I S+R  +    FIE  TP L  S+PEGARDF++
Sbjct: 123 IVRLKYRYLDLRRDKMQSNIIFRHNFILSIRNFLAKNGFIEIETPYLIVSTPEGARDFII 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQ+LM +GFDRYFQIA CFRDED R+DR P EF QLDMEMS
Sbjct: 183 PSRLQPGKFYALPQSPQLFKQILMVAGFDRYFQIARCFRDEDLRADRQP-EFTQLDMEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+E +D+   +E + + V +E  N   ++  F R+ Y+DA+  YG+DKPDLR  + + +V
Sbjct: 242 FIEVEDVFTIIEELFKTVLKEVMNIE-INTPFPRLSYEDAMNTYGSDKPDLRYDLKIVDV 300

Query: 303 TE-------HFVHSEFR---VFSKILSVN--PGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
           T         F+ S      V   I+  N  P    W+I            +++ E  + 
Sbjct: 301 TNILKDLPLEFIRSTIEKDGVIKGIVLKNIVPSRREWSI----------IENKVRE-LKG 349

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
           +G      I W     G +     ++K+L+    + +   L+++ GDS F IAG      
Sbjct: 350 KG------IMWFTYADGELKS--SISKYLDENIKDKLIKNLNLKSGDSFFCIAGTWKDVV 401

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                 R  +A+   +       F WI DFP +E++EEE++I   H+PFT P+     L 
Sbjct: 402 KILGILRLEVAELFNMEKKEGLFFLWITDFPLFEYDEEERRIVAEHHPFTSPKDEDIPLL 461

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             + L +KA  YDLV NG E+ SG IR H  E+  + F+ +GI+ E  + +FG L  AF+
Sbjct: 462 DTNPLKVKAKCYDLVLNGTELGSGSIRIHKKEIQEKVFNILGITPEDAKKKFGFLLEAFE 521

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA GIDRI+ +L  + ++REV  FP +Q+   LL G+PS V  +QL E+ ++
Sbjct: 522 YGAPPHGGIALGIDRIIAILTNSNSLREVIAFPKTQSGTCLLTGAPSEVDPKQLEEVHIK 581

Query: 591 IV 592
           +V
Sbjct: 582 VV 583


>gi|253997486|ref|YP_003049550.1| aspartyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253984165|gb|ACT49023.1| aspartyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 595

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 233/598 (38%), Positives = 366/598 (61%), Gaps = 14/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG L    +G  V L GW HR R HGG+IF+D+RD  G+ Q+V +PD+   FE+A+
Sbjct: 3   RTHYCGHLNREHIGQTVTLCGWAHRRRDHGGVIFIDLRDREGLAQIVIDPDTKGAFEVAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +VRSE+VL +   V +R   T+N N+ TG++E+ A +IE+L+ +   P  +  +    E+
Sbjct: 63  TVRSEFVLKVVCKVRARPEGTVNPNLPTGEVEMLATEIEVLNASLTPPF-MLDDENLTET 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R ++R++DLRR  + KN++ R R+  ++R  +    FIE  TP+LT S+PEGARD+LVP
Sbjct: 122 VRLEHRYIDLRRPAMQKNMMLRYRVAKTLRDYLDVNGFIEVETPMLTRSTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRVHHGQFFALPQSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQP-EFTQVDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +E++DI++ +E ++R + +   N + +   F R+ + +A+ RYG+DKPD+R  + +  ++
Sbjct: 241 MEENDIMDLVEEMIRQMLKNVQNVD-LPAKFPRMPFAEAMNRYGSDKPDMRVTLEITELS 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359
           +     +F+VF+   ++  G         G   +R+  D   E+ +  G  GLAYI    
Sbjct: 300 DVMKDVDFKVFAGAANMAGGRVAALRVPNGAAISRSEIDAYTEFVKIYGAKGLAYIKIND 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
             +L+E G      P+ K++++   +A+  R   Q+GD  FF   D  K  + A  A R 
Sbjct: 360 ITKLNEEGL---QSPIVKNIHVAALQAVIERTGAQNGDIVFF-GADKAKVVNEALGALRL 415

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  + G ++   +   W++DFP +E +EE  +    H+PFT P+ G E L  ++  +  
Sbjct: 416 KVGHDKGHVDGRAWAPLWVVDFPMFEHDEENDRWVALHHPFTAPKDGHEDLLVSNPGACL 475

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG+E+  G +R H  +V  + F  + IS+E  + +FG L  A Q G PPHGG
Sbjct: 476 SKAYDMVLNGWEVGGGSVRIHKQDVQSKVFDALKISREEAQEKFGFLLDALQYGAPPHGG 535

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENP 595
           +A G+DR+V L+ GA+++R+V  FP +Q    L+  +P+ V  +QLREL +R+  +NP
Sbjct: 536 LAFGLDRLVTLMAGAESIRDVIAFPKTQRAQCLMTNAPNEVDEKQLRELHIRVRSQNP 593


>gi|260890443|ref|ZP_05901706.1| aspartate--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260860063|gb|EEX74563.1| aspartate--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 593

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/602 (39%), Positives = 368/602 (61%), Gaps = 19/602 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           YR +   +L + +VG  V LSGW+ +VR  G   F+D+RD YGITQ++ N +      FE
Sbjct: 2   YRNYKLNELRMENVGEEVILSGWISKVRDLGHFTFIDLRDRYGITQILVNEEVSGKELFE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +++EWV+ + G V  RS++  N NI TG IE+ A+ IEILS +++LP  +      
Sbjct: 62  ETRKLKNEWVIKVTGKVAERSSK--NKNIPTGDIEVEAKNIEILSRSKQLPFEIDETGNL 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E++R  YR+LD+RR  +  NI+KR  ++ S+R  M    F++  TPIL  ++PEGARDF
Sbjct: 120 NENMRLTYRYLDIRRPKMLNNIIKRNDMLFSIRKFMNDNGFLDIDTPILAKATPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQ+LM SG D+Y+Q+A CFRDED R+DR P EF QLD+E
Sbjct: 180 IVPSRINKGDFYALPQSPQLFKQILMVSGVDKYYQLAKCFRDEDLRADRQP-EFTQLDLE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+EQ+DILN  E + + VF++ + G  ++ NF R+ YDDA+  YG+DKPDLR  + + 
Sbjct: 239 MSFIEQEDILNVTEALAKQVFKDVT-GIEITENFERMSYDDAMNFYGSDKPDLRFEMKLI 297

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQ-PGLAY 358
           ++++   +  F VF    ++  G  V AI A      +R +   + ++ ++  +  GLAY
Sbjct: 298 DLSKETQNCGFGVFEN--AIKDGGSVKAIVAPNAEKFSRKYIKDLEDFVKTYFKAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
           I  +++E G +    P+AK         I  +L +++ +    +A D  K       A R
Sbjct: 356 I--KINEDGEIN--SPIAKFFTEEKLAEITQKLGIKNNEIALILA-DKYKIVHDGLGALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLS 476
             + +EL +I+ + F+F W++DFP +EW+EEE +    H+PFT + Q   + L  N+L  
Sbjct: 411 LKLGEELELIDKDSFKFLWVIDFPMFEWSEEENRYKAQHHPFTSIKQEDRKYLDSNELDK 470

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           IK   YD+V NG+EI  G IR H  E+  + F  +G+SKE  +++FG      + G+PPH
Sbjct: 471 IKTDSYDMVLNGYEIGGGSIRIHEEELQEKVFEKLGLSKEEQQDKFGFFLEVLKYGVPPH 530

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE-LGLRIVENP 595
           GG+A GIDR +M +L   +++EV  FP +    DL+ G+P+ +    L E L L+++E  
Sbjct: 531 GGLAFGIDRWLMAILKENSIKEVIPFPKTNKGQDLMTGAPAEIEENILTEDLRLKLLETE 590

Query: 596 KK 597
           K+
Sbjct: 591 KE 592


>gi|89895177|ref|YP_518664.1| aspartyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|89334625|dbj|BAE84220.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 592

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/587 (41%), Positives = 346/587 (58%), Gaps = 11/587 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT S G L +S  G+ + L GWV R R HGG+IF+D+RD  G  QVV NPD   F  A+ 
Sbjct: 7   RTES-GSLRLSHAGAVIHLLGWVQRRRDHGGVIFVDLRDRSGFVQVVFNPDMPDFAAAER 65

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+ I G V  R     N N+ TG+IE+ A+ + IL+ A+  P  +  + +  E +
Sbjct: 66  LRSEYVVAIKGKVRPRPEGATNPNLETGEIEVVAESLTILNGAKTPPFYIQDDVDVDEMV 125

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  + +    R ++   MR    ++ F E  TP+L  SSPEGARD+LVPS
Sbjct: 126 RLKYRYLDLRRPEMQQVFKIRHQVTQVMRNFFDSQGFYEIETPMLIKSSPEGARDYLVPS 185

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ G FYALPQ+PQ +KQLLM SG ++YFQI  CFRDED R+DR P EF QLD+EMSF 
Sbjct: 186 RVHPGEFYALPQSPQIFKQLLMVSGMEKYFQIVRCFRDEDLRADRQP-EFTQLDVEMSFA 244

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           E +DIL  ME ++  +F+E + G  +   F R+ Y +A+  YG+DKPD+R  + M +V E
Sbjct: 245 EVEDILPMMEELMARIFKE-TIGRDIPRPFPRMTYQEAMELYGSDKPDIRFGMEMVDVAE 303

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
               S F+VF+  L+   G  V A+ AKG  G  R   D + ++    G  GLAYI   L
Sbjct: 304 WVKDSNFKVFTDTLA--KGGRVKALCAKGCAGMPRRELDGLIQFVSIYGAKGLAYIV--L 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G  +   P+AK  +      +  +L  + GD  FF+A             R  + + 
Sbjct: 360 AEEGIKS---PIAKFFSEEQLNGLIAKLKGETGDILFFVADKEAVVADALGHLRLELGKR 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+I  +   F W+ +FP  +W+EE+K+    H+PFT P      L   +   ++A  YD
Sbjct: 417 LGLIPEDALNFLWVTEFPLLQWDEEDKRFVAIHHPFTSPMTEDLPLLPTEPGKVRAKAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  EV  Q F  +G++ E  + +FG L  AF+ G PPHGGIA G+
Sbjct: 477 MVLNGTELGGGSIRIHQREVQEQMFDLLGLTPEEAKAKFGYLLDAFEYGTPPHGGIAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           DR+ MLL G  N+R+V  FP +Q+  DL++ +PS+V  +QL+EL ++
Sbjct: 537 DRLTMLLTGKDNIRDVIAFPKTQSASDLMIQAPSSVDEKQLKELHIK 583


>gi|289549034|ref|YP_003474022.1| aspartyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182651|gb|ADC89895.1| aspartyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 597

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/604 (39%), Positives = 357/604 (59%), Gaps = 27/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFE 60
           RT  CG++G  D+G  V L GWVHRVR HGG+IF+D+RD  G+ QVV     NP++  + 
Sbjct: 3   RTKYCGEIGEEDLGREVVLCGWVHRVRNHGGVIFIDLRDREGLVQVVVEESVNPEA--YN 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  +RSE+V+C+ G+V  R   T N  + TG  E+   +IE+L+  E LP PV  E   
Sbjct: 61  VADQLRSEYVVCVKGVVRKRPPGTENPKLKTGMYEVVGYEIEVLNTCEPLPFPVEEETPV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR+++ +NI+ R R    +R  ++ + F+E  TP LT S+PEGARDF
Sbjct: 121 SEELRLKYRFLDLRRESMKENILFRHRSYQIIRRTLVEKGFVEVETPFLTKSTPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQ+PQ +KQ+LM +G D+YFQI  C RDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRLHPGKFYALPQSPQLFKQVLMVAGIDKYFQIVKCLRDEDLRADRQP-EFTQVDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+++D++   E ++  +F+E   G  +   F RI Y + + RYGTDKPD R  + + 
Sbjct: 240 MSFVDEEDVIQISEELVSNLFKELL-GIDLKRPFDRISYAEVMERYGTDKPDRRFGLELV 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++    + F VF  +L    G  V  +  KG   +R   D + + A+  G  GLA+I 
Sbjct: 299 DVSQELKETHFMVFRSVLET--GGVVKGMNLKGLSLSRRELDDLTKKAQELGARGLAWIK 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               E G +  + P+ K L    T A+  ++  ++GD+    A          +  R  I
Sbjct: 357 L---EKGKL--VSPITKFLTEGETNALLEKMGAEEGDTIVLCADSRDVVNKVLSSLRLQI 411

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-----MESLKGND-- 473
           A++ G+I+   ++  W++DFP  EW++EE +    H+PFT P+        E+L+  D  
Sbjct: 412 AKQYGLIDEEKWDILWVVDFPLLEWDQEEGRFVSVHHPFTAPRQEDIPKLEEALRAEDPK 471

Query: 474 -----LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
                + S+KA  YDLV NG E+  G +R H  ++    F  + IS++  E +FG L RA
Sbjct: 472 DKIKLVSSVKARAYDLVINGEEVGGGSVRIHDPKLQKMIFDLLNISQQEAEEKFGFLLRA 531

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
            + G PPH GIA G+DR++ ++ G  ++R+V  FP +Q     L G+P  VS +QLREL 
Sbjct: 532 LRYGAPPHAGIAFGLDRLLAIMRGLDSIRDVIAFPKTQKGVCPLTGAPDYVSPKQLRELH 591

Query: 589 LRIV 592
           +R V
Sbjct: 592 IRPV 595


>gi|168494130|ref|ZP_02718273.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183575842|gb|EDT96370.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 587

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEKEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|70726292|ref|YP_253206.1| aspartyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|97196912|sp|Q4L6X5|SYD_STAHJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|68447016|dbj|BAE04600.1| aspartyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 588

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/592 (41%), Positives = 351/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD       +A
Sbjct: 4   RTTYCGLVTEELLNQKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALSVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
           ++VRSE+V+ ++G V  R  +T+N+ I TGQ+E+    I I++ +E  P  +  E +   
Sbjct: 64  ETVRSEYVVEVEGTVTKRDPDTVNSKIKTGQVEVQVSNISIINKSETPPFSINEENQNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +   ++R  +    F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRPELAQTFKMRHQTTRAIREYLDNNGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +LR V ++   G  VS  F R+ Y++A+RRYG+DKPD R  + + +
Sbjct: 243 SFVDQEDVIQMGEEMLRKVVKDVK-GIDVSGPFPRMTYEEAMRRYGSDKPDTRFEMELKD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF   +  N   EV AI AKG   N  R   D + E+    G  GLA++
Sbjct: 302 VSQLGREMDFKVFKDTVENNG--EVKAIVAKGAADNYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ + G     GP+A+     N   ++     + GD   F+A  P          R  
Sbjct: 360 --KVVDDG---LSGPIARFFEDSNVATLKDLTQAESGDLVMFVADKPNVVAQSLGALRIK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ N   F W+ D+P  E++E+ K+   AH+PFT P+    S   ++  + +A
Sbjct: 415 IAKELGLIDENKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKQEDISKLDSEPQNAQA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR    E+  + F  +G +KE    +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIADGELQEKMFEVLGFTKEQAREQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLEELSLRI 586


>gi|331265544|ref|YP_004325174.1| aspartyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682216|emb|CBY99833.1| aspartyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 587

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLMEQEIQDITEGLIARVMKE-TKGIDVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEIVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  + +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQAD-LTAALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEDRYMSAHHPFTLPQADTAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|168491642|ref|ZP_02715785.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|182685049|ref|YP_001836796.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|221232823|ref|YP_002511977.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225855603|ref|YP_002737115.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|238691140|sp|B2IN32|SYD_STRPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781754|sp|B8ZPN7|SYD_STRPJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781756|sp|C1CH44|SYD_STRZJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|182630383|gb|ACB91331.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|183574107|gb|EDT94635.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|220675285|emb|CAR69878.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225722187|gb|ACO18040.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 587

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|15606775|ref|NP_214155.1| aspartyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|3915067|sp|O67589|SYD_AQUAE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2984003|gb|AAC07548.1| aspartyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 603

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 236/605 (39%), Positives = 355/605 (58%), Gaps = 27/605 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFE 60
           RT  CG++   D+G  V+L+GWVHR R HGG+IF+D+RD  GI QVV     NP++  +E
Sbjct: 10  RTKYCGEVSEEDIGKEVKLAGWVHRKRHHGGVIFIDLRDREGIVQVVVEEKTNPEA--YE 67

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  ++SE+V+ + G V  R   T N  + TG +E+ A +I + + +E LP PV  E   
Sbjct: 68  VADKLKSEYVIGVVGKVRKRPEGTENPKLKTGYVEVVADRILVFNTSEALPFPVEEETHV 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  + KYR++DLRR+++  N++ R R+    R     E FIE  TP LT S+PEGARDF
Sbjct: 128 SEETKLKYRYIDLRRESMKNNLIFRHRVYQITRNFFTKEGFIEIETPFLTKSTPEGARDF 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQ+PQ +KQ+LM +GFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 188 LVPSRLHPGKFYALPQSPQLFKQILMIAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDYE 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV ++++++  E ++  +F+E   G  +   F RI Y +A+ +YGTDKPD R  + + 
Sbjct: 247 MSFVSEEEVMDVAERLIATLFKELL-GVELKTPFERISYREAMEKYGTDKPDRRFGLELI 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +T+ F ++ F+VF  +  V  G  + AI  KG   +R   D + ++ +S G  GLA+I 
Sbjct: 306 ELTDIFKNTAFKVFKSV--VEAGGIIKAINFKGSNLSRKEIDELTKFVQSLGAKGLAWIK 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D+  +     P+ K      T+ +  R   + GD   F A           + R H+
Sbjct: 364 VEKDKLTS-----PIVKFFTEEETQKLLERTKAEPGDVILFSADKKEMVYKILGNLRLHL 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGND------ 473
            ++  +I+ + ++  WI+DFP  EW+EEE++    H+PFTMP +  +  LK         
Sbjct: 419 GKKYKLIDESKWDVFWIVDFPLMEWDEEEERFVSLHHPFTMPREENIPKLKEALEEEDLE 478

Query: 474 -----LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
                + S++A  YD+V NG EI  G IR H  ++    F  +GI +   + +FG L  A
Sbjct: 479 KKKEIVHSVRARAYDMVLNGEEIGGGSIRIHRRDIQEVVFKLLGIGEVEAQEKFGFLLEA 538

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
            + G PPHGG+A G+DR+V L+LG  ++R+   FP +Q     L G+P  V  +QL+EL 
Sbjct: 539 LKYGAPPHGGLAFGLDRVVALMLGLDSIRDTIAFPKTQRGICPLTGAPDYVDPKQLKELH 598

Query: 589 LRIVE 593
           ++++E
Sbjct: 599 IKVLE 603


>gi|303254918|ref|ZP_07341002.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303259616|ref|ZP_07345592.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262061|ref|ZP_07348006.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303264518|ref|ZP_07350437.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303267190|ref|ZP_07353056.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303270036|ref|ZP_07355759.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|301802784|emb|CBW35558.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302598100|gb|EFL65162.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302636701|gb|EFL67191.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302639168|gb|EFL69627.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302640430|gb|EFL70854.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643254|gb|EFL73535.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302645888|gb|EFL76116.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|332198535|gb|EGJ12618.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
          Length = 587

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|15903965|ref|NP_359515.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116516137|ref|YP_817329.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|32171536|sp|Q8CWN4|SYD_STRR6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|122277825|sp|Q04I59|SYD_STRP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|15459621|gb|AAL00726.1| Aspartyl-tRNA synthetase (aspartate-tRNA ligase) [Streptococcus
           pneumoniae R6]
 gi|116076713|gb|ABJ54433.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 587

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E +    V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKDIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+ L+V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEALAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|158520687|ref|YP_001528557.1| aspartyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|226736534|sp|A8ZUR7|SYD_DESOH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|158509513|gb|ABW66480.1| aspartyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 597

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/597 (41%), Positives = 351/597 (58%), Gaps = 14/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RTH+C +L  +  G+ V L+GWV R R HGG+IF+D+RD  GITQVV NPD   A    A
Sbjct: 10  RTHTCNELSAASAGTEVVLAGWVQRRRDHGGVIFVDLRDREGITQVVFNPDREPAVHAKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+E+V+C+ G V  R  + +N  + TG+IE++A ++ IL+ A+  P  V    +  E
Sbjct: 70  HDIRNEYVICVKGKVEKRPDDMVNPKLTTGEIEVAASELAILNTAKTPPFMVEDRIDVSE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           SIR K+RF+DLRR  + KN++ R R   + R  + ++ F++  TP LT ++PEGARD+LV
Sbjct: 130 SIRLKHRFVDLRRPAMQKNLLARHRAGMAAREFLNSQGFLDIETPFLTRNTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G+FYALPQ+PQ +KQ+LM +GFDRY+QI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRVNPGAFYALPQSPQLFKQMLMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQIDLEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV ++D++   E ++  V  + + G  V   F R+ YD A+  YG DKPDLR  + + ++
Sbjct: 249 FVGEEDVMAIGEGLVANVVRQVT-GEAVDLPFSRMTYDQAMADYGLDKPDLRFDMKLVDI 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+      F+VFS   +V  G  V A+ AKG     R   D   E+       GLA++  
Sbjct: 308 TDIAAGCGFQVFSG--AVKNGGIVKALNAKGCADFTRKELDDYTEFVAIYKARGLAWVKV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R D         P+AK        ++  RL+M  GD  FF A           + RN I 
Sbjct: 366 RED-----GWQSPIAKFFTDDEKASMAQRLNMAVGDLVFFGADAASVVNDSLGNLRNRIG 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAF 480
           + LG+++ N   F W+ DFPF+E++E EK+    H+PFT P +  ME L   D  ++++ 
Sbjct: 421 ERLGLVDKNRMCFLWVTDFPFFEYDETEKRYQAKHHPFTAPHEADMEHLH-TDPEAVRSR 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG EI  G IR H  +V  + F  +G++ E    +FG L  A   G PPHGG+A
Sbjct: 480 AYDLVLNGTEIGGGSIRIHNRQVQEKMFEALGLAPEDYTAKFGFLLDALDSGAPPHGGMA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G DR+VMLL G  ++REV  FP +Q     L  +PS    +QL EL +++  +  K
Sbjct: 540 FGFDRLVMLLCGESSIREVIAFPKTQKAACALTDAPSPADKKQLDELFIKVTADINK 596


>gi|312866779|ref|ZP_07726992.1| aspartate--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097562|gb|EFQ55793.1| aspartate--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 584

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 239/593 (40%), Positives = 357/593 (60%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGCVREEHIGTRITLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPETVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++RSE+V+ + GLV +R  E  N N+ TG +EL  + I +L+ A+  P  +    E  
Sbjct: 63  AENIRSEYVVEVTGLVEAR--EQANPNLPTGAVELKVEAITVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIEVTLPFPRMNYDDAMALYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   +  R   D++ E A+  G  GLA++
Sbjct: 299 LTELVKGVDFKVFSEAPAVK------AIVVKGAADHYSRKDIDKLTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            +        A  GPVAK L  + ++ +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KY-----AEGALNGPVAKFLTDLTSD-LTAALQLEDKDLVLFVA-DTLEVANATLGALRV 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+EL +I+ N + F W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++
Sbjct: 406 RLAKELDLIDNNQYNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETEHELEGDLSKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G +KE    +FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINHKDLQERMFKALGFTKEAANEQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L++
Sbjct: 526 LAIGLDRFVMLLAGEDNIREVIAFPKNNKATDPMTQAPSVVSEKQLDELNLQV 578


>gi|73662438|ref|YP_301219.1| aspartyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|97196920|sp|Q49Y68|SYD_STAS1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|72494953|dbj|BAE18274.1| aspartyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 588

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/593 (40%), Positives = 356/593 (60%), Gaps = 16/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +  S +   V L GWVH  R  GG+IF+D+RD  G  Q+V NPD      + A
Sbjct: 4   RTTYCGLVTESLLDQEVTLKGWVHNRRDLGGLIFVDLRDREGYVQIVFNPDFSEEALKTA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
           ++VRSE+V+ + GLV  R  +T+N  I TGQ+E+   +I I++ +E  P  +  E +   
Sbjct: 64  ETVRSEYVVEVKGLVKKRDPQTVNPKIATGQVEVQVSEINIINKSETPPFAINEENQNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +   S+R  +  E F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDKEGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHDGEFYALPQSPQIFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D+++  E +L+ V ++  +   +   F R+ Y++A+ RYG+DKPD R  + + N
Sbjct: 243 SFVDQEDVMDMGEEMLQNVVKDVKDVE-IPRPFPRMTYNEAMERYGSDKPDTRFEMELIN 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V+E     +F+VF    +VN   +V AI AKG      R   D + E+    G  GLA++
Sbjct: 302 VSELGEEMDFKVFKD--AVNNDGQVKAIVAKGAADQYTRKDIDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ + G     GP+A+     + E ++   + + GD   F+A  P          R  
Sbjct: 360 --KVVDDG---LSGPIARFFETTHIEKLQSLTNAESGDLVLFVADKPNVVAQSLGALRLK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIK 478
           +A+EL +I+ +   F W+ D+P  E++E+ K+   AH+PFT P Q  +E L  ++  + +
Sbjct: 415 LARELDLIDESKLNFLWVTDWPLLEYDEDLKRYTAAHHPFTAPKQEDIEKL-DSEPENAQ 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G IR H  E+  + F  +G ++E  + +FG L  AF+ G PPHGG
Sbjct: 474 ANAYDVVLNGYELGGGSIRIHNGELQAKMFEVLGFTEEQAQEQFGFLLDAFKYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IA G+DR+VMLL G  N+R+   FP + +   LL  +PS VS  QL EL LRI
Sbjct: 534 IALGLDRLVMLLTGRTNLRDTIAFPKTASATCLLTDAPSEVSENQLEELSLRI 586


>gi|307707786|ref|ZP_07644264.1| aspartyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616168|gb|EFN95363.1| aspartyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 587

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/596 (40%), Positives = 358/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +T      +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTAVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTSIQAE-LTTALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|302380375|ref|ZP_07268845.1| aspartate--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|303233682|ref|ZP_07320336.1| aspartate--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302311865|gb|EFK93876.1| aspartate--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302495116|gb|EFL54868.1| aspartate--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 588

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/590 (40%), Positives = 354/590 (60%), Gaps = 14/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG+L +SDV   V L GWV + R  G +IF+D+RD+ GITQ+    D+   F+ AK
Sbjct: 9   RTHMCGELRLSDVNKEVILMGWVQKERNLGSLIFIDLRDNTGITQIAIKDDNKEIFDKAK 68

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V+SE+VLC+ G V  R  E+ N NI TG+IE+ A ++ IL  A   P+ +  +    E+
Sbjct: 69  DVKSEYVLCVKGDV--RERESKNNNIPTGEIEVIANELIILDTANVPPIYIKDDDNAQEA 126

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLR+  L  N+  R +    +R  +    F E  TP L   +PEGARD+LV 
Sbjct: 127 VRLKYRYLDLRKPKLQNNLKLRAKTNKLIREYLDENGFYEIETPFLGKPTPEGARDYLVA 186

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN+ SFYALPQ+PQ  KQLLM SG DRY+QI  CFRDED R++R P EF Q+DMEMSF
Sbjct: 187 SRVNEHSFYALPQSPQLMKQLLMISGMDRYYQIVKCFRDEDLRANRQP-EFTQVDMEMSF 245

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+Q+D++   E +++ +F+E   G  +     R+ Y +A+ RYG DKPDLR    + N+T
Sbjct: 246 VDQEDVMTINEGLIKKLFKEIR-GIDIPTPIKRMTYSEAMERYGCDKPDLRFGFELKNIT 304

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E    SEF+VFS     N       I       +R   D++ ++ +  G  GL+   W  
Sbjct: 305 ELVKDSEFKVFSSCNEKNKSVRCINIGNYESEYSRKKIDKLEKFVKEYGAKGLS---WIR 361

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP--LKFCSFAADARNHIA 421
              G +     + K L+     +I +    +D ++  FI  D   + F   +A  RN IA
Sbjct: 362 VHDGEI--QSSIKKFLSDEELNSI-IESTKEDENALIFILADKNDVVFNGLSA-LRNKIA 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +++ +++ + FEF WI+DFP +E++EEE +    H+PFTMP+         D   ++A  
Sbjct: 418 RDMNLVDNDTFEFVWIVDFPLFEYDEEENRFVAMHHPFTMPKEEDIQYLLTDKEKVRAKA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+VCNG EI  G IR + S++  + F  + +++E++EN+FG    AF  G PPHGG+A 
Sbjct: 478 YDIVCNGDEIGGGSIRINNSDLQKKMFEALELTEEMIENKFGFFVEAFNYGTPPHGGLAY 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++MLL+G  N+++V  FP +Q+  DLL G+P+ V  +QL+E+ +++
Sbjct: 538 GMDRLMMLLVGTDNIKDVIAFPKTQSATDLLTGAPTNVDEKQLKEIHIKL 587


>gi|148926627|ref|ZP_01810308.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145845146|gb|EDK22241.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 615

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/598 (40%), Positives = 348/598 (58%), Gaps = 22/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+ +    EIA
Sbjct: 34  RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 93

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120
            + R+E+VL  +G +  R    +N  + TG+IE+   K   L++  E  +P F   +   
Sbjct: 94  SNARNEFVLITEGTIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 150

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+
Sbjct: 151 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 210

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 211 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 269

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF EQ D++   E  L+ +F+  + G  +   F ++ Y DA+  YG+DKPDLR  +   
Sbjct: 270 MSFCEQKDVIKVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 327

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+
Sbjct: 328 DVIDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 387

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R 
Sbjct: 388 IQVKKD-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 442

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A EL +I+ N  EF W++DFP +E N ++      H+PFTMP+   E+    DL  I 
Sbjct: 443 FLANELKLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 497

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGG
Sbjct: 498 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 557

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR++ML+ GA N+REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 558 IAIGLDRLIMLVTGANNIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 615


>gi|320102960|ref|YP_004178551.1| aspartyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319750242|gb|ADV62002.1| aspartyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 589

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/594 (40%), Positives = 350/594 (58%), Gaps = 12/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-AK 63
           RTH+CG+L  S +G  V L+GWV   R  GG+ F+D+RD YG+TQ+V  PD +  +  A+
Sbjct: 4   RTHTCGELNASHIGQTVTLNGWVDGWRDLGGLTFIDLRDRYGVTQIVFEPDDSGLQARAQ 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-EREYPE 122
            +R+EWV+ + G+V +R     N  + TG IE+ A  +++ + A+  P  + G   E  E
Sbjct: 64  ELRAEWVVGVQGIVAARLPGKENPKLTTGAIEVRATALDVFNQAKTPPFDIRGVAGEANE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLRR    K ++ R R+  ++R  M    F+E  TPIL  S+PEGARDFLV
Sbjct: 124 ELRLKYRFLDLRRPEQQKVLILRHRLNQTLRRVMSQHGFLEIETPILGRSTPEGARDFLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G+FYALPQ+PQ YKQLLM +G+DRYFQIA CFRDED R++R P EF QLD+EMS
Sbjct: 184 PSRIHPGAFYALPQSPQLYKQLLMVAGYDRYFQIARCFRDEDLRANRQP-EFTQLDVEMS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE +D+L+T+E ++  +  EF+ G  +S    R+ Y DA+ RYG D+PDLR  + +H++
Sbjct: 243 FVEFEDVLDTIELLIVELAREFA-GMDLSRPLPRLDYRDAMERYGVDRPDLRFGMELHDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +   H+EF+VF + L    GY +  + A G    +R   D + E+ ++ G  GL ++  
Sbjct: 302 ADLAAHTEFQVFKQALDY--GYRIRGLCAPGAARYSRKDLDGLTEFVKTLGAKGLVWL-- 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +++E+G     GP AK L       +R R   + GD    +A          A  R  + 
Sbjct: 358 KVEETGL---NGPAAKFLPESIQTQLRERFQARVGDLMLIVADAEATTHQCLAALRAKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L + +   F F W++ FP   W+ EE +    H+PFTMP      L   D   ++A  
Sbjct: 415 GDLKLYDPASFHFSWVVKFPLLAWDAEEGRFVAEHHPFTMPLPEDLPLLQTDPAKVRAQA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E   G IR H   +  + F  +G++ +  E +FG L  A + G PPHGGIA 
Sbjct: 475 YDLVINGEEAGGGTIRCHDPAIQARIFELLGLTPDQAEEKFGFLLSALRLGAPPHGGIAL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR+VML  G  ++R+   FP +    DL+ G+P+ V   QLR+L ++ + +P
Sbjct: 535 GLDRLVMLFAGLTSIRDCIAFPKTAKGADLMTGAPAPVEPRQLRDLRIKTLVDP 588


>gi|149194524|ref|ZP_01871620.1| aspartyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135268|gb|EDM23748.1| aspartyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 588

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/596 (39%), Positives = 350/596 (58%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           R+H C +L   +VG  V L GWV+  R HGG+IF+D+RD  G+ Q+VA+P       E+A
Sbjct: 2   RSHYCAELNEFNVGEEVELVGWVNSHRDHGGVIFIDLRDRSGLIQIVADPADSKKAHEVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + V+ E+V+ + G V  R     N  + TG+IE+ A +IEI + +E LP  + G++   E
Sbjct: 62  ERVKDEYVIKVKGKVRLRGEGLENPKLKTGKIEVVADEIEIENKSEVLPFQI-GDKSVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR     +  + R++++ ++R     E FI+  TPILT S+PEGARD+LV
Sbjct: 121 ELRLKYRYLDLRDKNSLETFILRSKVVKAIRDYFDKEGFIDVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQ+LM +GFD+Y+QIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRIYPGEFYALPQSPQLFKQILMVAGFDKYYQIAKCFRDEDLRADRQP-EFTQVDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV QDD++ T+E +++  FE    G  V     RI Y +A+ +YG+DKPDLR  + M +V
Sbjct: 240 FVTQDDVIKTIEGMIKEAFE--VAGIKVDLPIKRISYKEAMEKYGSDKPDLRFDLAMVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            + FV S   +FS+I          A+  +GG    +R     +  + +  G  GLAYI 
Sbjct: 298 IDEFVDSNNEIFSEIAKDKKNNRFKALKIEGGDNFYSRKKLKELENFVKKFGAKGLAYIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + +        GP+ K ++  +   +  +L+ + GD  FF AGD      +    R  I
Sbjct: 358 VKEERL-----KGPILKFMSEESLNRLIEKLNPKVGDIIFFGAGDKKTVLDYMGRLRIKI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++G+IN + + F W++DFP +E +E        H+PFTMP  G  +    +   I + 
Sbjct: 413 AKDMGLINEDEYNFVWVVDFPMFEKDENNNPTPL-HHPFTMPDMG--TWDEENFEDINSI 469

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+EI  G IR H  E+  + F  +GI +     +FG L  A + G PPHGG A
Sbjct: 470 AYDLVLNGYEIGGGSIRIHKEEIQEKVFKLLGIDEMEAREKFGFLLDALKFGAPPHGGFA 529

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+    N+R+V  FP +Q    LL G+P  V   QL+EL +RI + PK
Sbjct: 530 LGLDRVIMLMRKTDNIRDVIAFPKTQKAQCLLTGAPGEVDKSQLKELHIRI-KKPK 584


>gi|330811396|ref|YP_004355858.1| Aspartate--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379504|gb|AEA70854.1| Aspartate--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 591

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/595 (41%), Positives = 355/595 (59%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLEGQEVTLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRADTFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R A   NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKITGKVRLRPAGAGNANMASGMIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+R+  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRMTTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI+   E ++R +F+E          F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LDEKDIMGLTEGMIRNLFKEVL--GLEFGEFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   + A+   GG    R   D   ++    G  GLAYI   
Sbjct: 300 DQLKDVEFKVFSGPAN-DPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+ K++   N   I  R+   DGD  FF A D  K  S A  A R  + 
Sbjct: 359 ERAAGVDGLQSPIVKNIPEANLNVILDRVGAVDGDIVFFGA-DKAKIVSEALGALRIKLG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L ++ C  +   W++DFP +E N ++      H+PFT P+   + L+ N   ++ +  
Sbjct: 418 HDLKLLTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCSPQELEANPATAL-SRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F  +GI++   E +FG L  A + G PPHGG+A 
Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGINEAEQEEKFGFLLDALKYGAPPHGGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|74316460|ref|YP_314200.1| aspartyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|97196989|sp|Q3SLL2|SYD_THIDA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|74055955|gb|AAZ96395.1| aspartyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
          Length = 597

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/597 (41%), Positives = 367/597 (61%), Gaps = 14/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG +  +DVG+ V L GW HR R HGG+IF+D+RD  G+ QVV +PD+ A F++A+
Sbjct: 2   RTHYCGAVTAADVGNTVTLCGWAHRRRDHGGVIFIDLRDREGMVQVVVDPDTPAAFKLAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+VL I+G V  R A T N ++ TG +E+    +++L+ +   P  +  E    E+
Sbjct: 62  DVRAEFVLKIEGKVRPRPAGTENPHLPTGMVEVLTLDLDVLNPSLTPPFQIDDE-TINEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR +YR+LDLRR+ + KN+  R R+   MR  +    F+E  TP+LT S+PEGARD+LVP
Sbjct: 121 IRLQYRYLDLRREPMQKNLKLRYRVSKIMRDYLDTHGFMEVETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SG DRYFQI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHDGMFYALPQSPQLFKQLLMVSGVDRYFQITKCFRDEDLRADRQP-EFTQVDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++ I+  +E ++R + ++ + G  +   F R+ Y +A+ RYG+DKPDLR  + + +V 
Sbjct: 240 MGEEAIMGLVEGMIRDMMQK-AQGIELPAAFPRMSYAEAMNRYGSDKPDLRVTLEIVDVG 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +      F+VF+   + +P   V A+   GG   +R+  D   E+ +  G  GLAYI  +
Sbjct: 299 DVMRDVAFKVFATPAN-DPKGRVAALRIPGGATLSRSEIDGYTEFVKIYGAKGLAYI--K 355

Query: 363 LDESG--NVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
           +++ G  N AG+  P+ K+L+     A+  R   Q+GD  FF A D  K  + A  A R 
Sbjct: 356 VNDVGQLNEAGLQSPIVKNLSEAALHAVMERTGAQNGDLIFFGA-DRAKVVNDALGALRL 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I  E G ++   +   W++DFP +E+NE+E + D  H+PFT P+ G E     D     
Sbjct: 415 KIGHEKGHVDGRAWAPLWVVDFPMFEYNEDENRWDALHHPFTAPKDGHEDWLATDPGKCL 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG+E+  G +R H  +V  + F+ + I +E    +FG L  A Q G PPHGG
Sbjct: 475 SKAYDMVLNGWEVGGGSVRIHREKVQEKVFAALNIGEEERREKFGFLLDALQYGAPPHGG 534

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           +A G+DR+V L+ GA+++R+V  FP +Q    L+  +P+ V  +QLREL +R+  NP
Sbjct: 535 LAFGLDRLVTLMAGAESIRDVIAFPKTQRASCLMTNAPNVVDEKQLRELHIRL-RNP 590


>gi|284925900|gb|ADC28252.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 583

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/598 (40%), Positives = 349/598 (58%), Gaps = 22/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+ +    EIA
Sbjct: 2   RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120
            + R+E+VL  +G +  R    IN  + TG+IE+   K   L++  E  +P F   +   
Sbjct: 62  SNARNEFVLIAEGTIRPRGEGLINPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF EQ D++N  E  L+ +F+  + G  +   F ++ Y DA+  YG+DKPDLR  +   
Sbjct: 238 MSFCEQKDVINVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+
Sbjct: 296 DVIDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R 
Sbjct: 356 IQVKKD-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A EL +I+ N  EF W++DFP +E N ++      H+PFTMP+   E+    DL  I 
Sbjct: 411 FLANELKLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGG
Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 526 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|307710175|ref|ZP_07646619.1| aspartyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619155|gb|EFN98287.1| aspartyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 587

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/597 (40%), Positives = 361/597 (60%), Gaps = 25/597 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMTT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGTVELNVTALTVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +T      +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA+I
Sbjct: 299 LTAVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
                +  +    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 -----KVADGELNGPVAKFLTNIQAE-LTTALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSI 477
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ   +  L+G DL  +
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETVHELEG-DLAKV 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHG
Sbjct: 465 RAIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L+I E+
Sbjct: 525 GLAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQIEED 581


>gi|325474142|gb|EGC77330.1| aspartyl-tRNA synthetase [Treponema denticola F0402]
          Length = 590

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/591 (40%), Positives = 347/591 (58%), Gaps = 8/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT +CG L     G  V L+GW+HR R HGGI FL++RD YG+TQVV + D++     +A
Sbjct: 6   RTVTCGGLNKDFAGKTVVLNGWIHRKRDHGGITFLNLRDRYGLTQVVVDDDASEELKALA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S++ E+ + ++GLV  R    IN  + TG+IE+ A KIE+LS +E LP  +  +    E
Sbjct: 66  ISLKQEFCIAVEGLVRPRPDSMINKEMATGEIEVKALKIEVLSKSEVLPFQIDEKTNANE 125

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  +I+ R++   ++R  + +++F+E  TP    S+PEGARD+LV
Sbjct: 126 DLRLKYRYLDLRSKAMQDHIMLRSKFTFAVREFLTSKDFLEIETPTFIKSTPEGARDYLV 185

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ YKQ+LM SGFD+YFQIA C+RDED R DR P EF Q+D+EMS
Sbjct: 186 PSRLYPGKFYALPQSPQIYKQILMVSGFDKYFQIARCYRDEDARGDRQP-EFTQIDLEMS 244

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  ++D+L+  E +++  F++  N + +   F RI YD+AI  YGTDKPDLR  + M + 
Sbjct: 245 FASREDVLSLTEGMMQYAFKKSINVD-LPKTFERISYDEAIDVYGTDKPDLRFEMKMQDA 303

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
                   F VF   +S     +   +  +    +R   + +   A+     GLA+I  +
Sbjct: 304 AFMAEIGNFAVFKDAVSSGGAVKALVVKGQAEAYSRKKIEELEAAAKIYKAKGLAWI--K 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     G ++K       E I  +L  + GD   F+A      C+     R+ + +
Sbjct: 362 VTE-GGAKFEGGISKFFEGKEAE-ICSKLGAEKGDLILFVADKYKIACTALGAVRSKLGK 419

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG++N   F+F WI+DFP +EWNEEE K D AH+ F+ PQ    +    +   +K   Y
Sbjct: 420 DLGLLNPAEFKFVWIVDFPLFEWNEEENKWDPAHHMFSAPQEKYIATMEENPEPVKGDLY 479

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+ASG IR H  E+  + F  VG  +   E +FG L  AF+ G PPHGGIA G
Sbjct: 480 DLVLNGYEVASGSIRIHNPELQKRIFKIVGFDESEAEKKFGFLTEAFKYGAPPHGGIAPG 539

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DRIVM++ G  +++EV  FP +      +  SPS V  +QL EL L I E
Sbjct: 540 LDRIVMIMAGETSIKEVIAFPKNSFAVSPMDDSPSEVDQKQLDELHLAIKE 590


>gi|152996209|ref|YP_001341044.1| aspartyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189082103|sp|A6VXD0|SYD_MARMS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150837133|gb|ABR71109.1| aspartyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 590

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/592 (41%), Positives = 360/592 (60%), Gaps = 15/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG+L  S++   + L GWVHR R HGG+IFLD+RD  GITQVV +PD A  F +A 
Sbjct: 2   RSHYCGELNASNISQEITLCGWVHRRRDHGGVIFLDVRDREGITQVVFDPDRAESFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+V+ + GLV +R   T+N N+ TG+IE+   ++EIL+ A+  P  +   +   E 
Sbjct: 62  SVRNEFVVKLKGLVRARPEGTVNPNMNTGEIEVLGTELEILNAAKTPPFQLDEHQSVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K RF+DLRR  + + +  R+++ + +R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKNRFIDLRRPEIQQKMRFRSKVTSVLRRYLDGNGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  QGSF+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTQQGSFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I+   E ++ G+F+E  + +     F R+ Y +A+  YG+DKPDLR P+ +  V+
Sbjct: 241 MSEQEIMAMTEEMIVGLFKELMDIDL--GTFPRMPYSEAMETYGSDKPDLRIPLTIVTVS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG    R   D   ++    G  GLAYI  +
Sbjct: 299 DLMAGVDFKVFSGP-ATDPKGRVAALKVPGGNALTRKQIDDYTKFVSIYGAKGLAYI--K 355

Query: 363 LDESGNVAG--MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
           +++  N+      P+ K L +    A+  RL+ +DGD  FF   D  K  + A  A R  
Sbjct: 356 VNDKSNLEEGLQSPIVKFLPVEVRAALLERLEAEDGDLIFF-GADSAKIVNEALGALRCK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +L +  C  +   W++DFP +E    +  I   H+PFT P    E+LK + L ++  
Sbjct: 415 LGDDLNLYTCK-WAPLWVVDFPMFE-ETSDGGITAIHHPFTAPSCSPENLKASPLTALSQ 472

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S +    F  + I+KE  E +FG L  A + G PPHGG+
Sbjct: 473 -AYDMVLNGTELGGGSIRIHQSSMQETVFELLNITKEEQEEKFGFLLDALKFGAPPHGGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VML+ G+ ++R+V  FP +Q+   LL  +P  VS +QL+EL +RI
Sbjct: 532 AFGLDRLVMLMTGSSSIRDVIAFPKTQSATCLLTQAPGEVSEKQLKELNIRI 583


>gi|306828557|ref|ZP_07461752.1| aspartate--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304429356|gb|EFM32441.1| aspartate--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 587

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/596 (40%), Positives = 355/596 (59%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL    + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELDVTALTVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V  E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMRE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +T      +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTAVVKDVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E     L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQAELTNA-LGLEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDSDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFQALGFSAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|291287345|ref|YP_003504161.1| aspartyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884505|gb|ADD68205.1| aspartyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 596

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/596 (40%), Positives = 354/596 (59%), Gaps = 16/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H+C  L   ++G  V L GWV R R HGG+IF+D+RD  G+TQVV +P+       +A
Sbjct: 10  RSHNCVQLTAKNIGEEVCLMGWVQRRRDHGGVIFVDLRDREGLTQVVMSPEYNKDVHAVA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+R+E+V+ + G V  R   TIN  + TG+IE+   +++IL+ ++  P  +       E
Sbjct: 70  DSIRNEFVIAVKGKVGMRPEGTINTKLPTGEIEVMVDELKILNASQTPPFMIDDFTNANE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  +  N++ R  I+ +MR  + A +F++  TP LT S+PEGARD+LV
Sbjct: 130 DIRLKYRYLDLRRRKIQNNLITRHNIVRTMREYLYARDFLDIETPFLTKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G  YALPQ+PQ +KQLLM  G+D+YFQI  CFRDED R+DR P EF QLDMEMS
Sbjct: 190 PSRVNPGKCYALPQSPQMFKQLLMVGGYDKYFQIVKCFRDEDLRADRQP-EFTQLDMEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++D++  +E +   +F+    G  +   F R+ YD+A+ +YG D PD R  + +  +
Sbjct: 249 FIDREDLMELLEGMFIEIFQNIK-GIKLERGFPRMSYDNAMEKYGHDAPDTRFDMFLKTI 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            E      F+VF ++  V  G  V AI AKG G   +R   D + E A S G  GLAYI 
Sbjct: 308 NELVADCGFKVFREV--VADGGVVKAINAKGAGEKYSRKNIDELTELAVSLGAGGLAYI- 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E    +   P+ K L   + + I   +D + GD  FF AG       + +  R  +
Sbjct: 365 -KVNED---SLQSPIVKFLGD-SADTIVKAMDGKPGDIIFFGAGKKDIVNLYMSKVRLKL 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I    + F W++DFP  +++ EEK+    H+PFT P      L   D   ++A 
Sbjct: 420 GKELGLIKEGDYSFVWVLDFPLLDYDAEEKRYVAMHHPFTAPLDEDIPLFDTDPGQMRAK 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG EI  G IR H S+V  + F+ +G + E  E +FG    A + G PPHGGIA
Sbjct: 480 AYDLVLNGSEIGGGSIRIHRSDVQEKMFNALGFTPEEREYKFGFFIDALKYGTPPHGGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR--IVEN 594
            G+DRI  +L G+ ++R+V  FP +Q   D++  +PS +  +QL+EL ++  +VEN
Sbjct: 540 FGVDRIATILTGSDSIRDVIAFPKTQKATDMMSEAPSKIDEKQLKELYMKFEVVEN 595


>gi|332707194|ref|ZP_08427247.1| aspartyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332353928|gb|EGJ33415.1| aspartyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 595

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/596 (41%), Positives = 352/596 (59%), Gaps = 25/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG+L    +G  V L GWV + R HGG+IFLD+RD  GI Q+V++P+     ++ A
Sbjct: 2   RTHYCGELRSQHIGETVTLCGWVSKRRDHGGVIFLDLRDISGIVQIVSDPERTPDSYKDA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG--ERE 119
             +R+E+V+ + G V  R  E++N  + TG++E+ A  IE+L+ V ++LP  V       
Sbjct: 62  DHLRNEYVVKVTGRVTKRPDESLNPKLPTGEVEIYALYIELLNKVRKQLPFQVSSADTES 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178
             E +R KYR+LDLRRD + KN+  R ++I  +R  +  E  FIE  TP+LT S+PEGAR
Sbjct: 122 VREDLRLKYRYLDLRRDRMSKNVQLRHQVIRGIRRYLEDEQGFIEVETPVLTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGQWYALPQSPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ Q++IL   E ++  +F+    G  +   F R+ Y +A+ RYG+DKPD R  + 
Sbjct: 241 MEMSFMSQEEILQLNETLVCHIFKTV-KGIDIPRPFPRLTYAEAMERYGSDKPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARSQ 351
           + NV++    S F+VFS  +      +V  IP    GGN A  +        + + A   
Sbjct: 300 LVNVSDLMKDSGFKVFSGAVKTGGVVKVLPIP----GGNEAISNVRIKPGGDLFKEASEA 355

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  G+AYI  R+ E G +  +G +  +L+    + +        G    F AG       
Sbjct: 356 GAKGIAYI--RVREGGEIDTIGAIKDNLSHSQKQQLLEATGATAGHLLLFGAGSADIVNK 413

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
                R  I QELG+I+       W+ DFP +EWN +EK+++  H+PFT P    + L  
Sbjct: 414 TLDRLRLVIGQELGLIDSTKINLLWVTDFPMFEWNADEKRLEALHHPFTAPHP--DDL-- 469

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +DL + +A  YDLV NG EI  G +R +  E+  Q F  +G+S+E   ++FG L  AF  
Sbjct: 470 DDLKTARAQAYDLVWNGVEIGGGSLRIYQPEIQQQVFEAIGLSEEEAHSKFGFLLEAFDY 529

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           G PPHGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +P  V  +QL+EL
Sbjct: 530 GAPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQARSLLTDAPGGVDDKQLKEL 585


>gi|330683918|gb|EGG95686.1| aspartate--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 588

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/592 (40%), Positives = 348/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD       IA
Sbjct: 4   RTTYCGLVTEDLLNEKVTLKGWVHNRRDLGGLIFIDLRDREGIVQIVFNPDFSQEALNIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+++ + G+V  R AET+N  I TGQ+E+    IEI++ +E  P  +  E     
Sbjct: 64  ETVRSEYIVEVQGVVTKRDAETVNPKIKTGQVEVQVSNIEIINKSETPPFSINEENTNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDDNGFYDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +LR V ++   G  V   F R+ Y +A+ RYG+DKPD R  + + N
Sbjct: 243 SFVDQEDVMAMGEEMLRKVVKDV-KGIDVPGPFPRMTYAEAMSRYGSDKPDTRFDMELIN 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF   +  N   E+ AI AKG      R   D + E+    G  GLA++
Sbjct: 302 VSQLGHEMDFKVFKDTVENNG--EIKAIVAKGAADQYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ + G     GP+A+     + E ++   +   GD   F+A  P          R  
Sbjct: 360 --KVTDEGLT---GPIARFFEDKDAEQLKSLTEASAGDLVMFVADKPEVVAQSLGALRIK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+ +   F W+ D+P  E+++E K+   AH+PFT P+        ++  + +A
Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDDESKRYVAAHHPFTSPKKEDIDKLDSEPENAQA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRMHNGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSEKQLEELSLRI 586


>gi|320530173|ref|ZP_08031243.1| aspartyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320137606|gb|EFW29518.1| aspartyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 602

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/597 (39%), Positives = 357/597 (59%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH CG L    VG  V L GWV R R HGG+IF+D+RD  G+ Q+V   A      F  
Sbjct: 9   RTHGCGTLRKEHVGGKVSLCGWVSRRRDHGGLIFVDMRDRSGLVQIVFDEAVMAGGTFHD 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++RSE+V+ + G V +RSA+T+N N+ TG++E+   ++ IL+ A+  P  +    +  
Sbjct: 69  AETLRSEFVIAVRGSVRARSADTVNPNMETGEVEIVVSELRILNKAKTPPFYIQDGIDVD 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR +YR+LDLRR  +  NI+ R R+   MR       F+E  TP+L  S+PEGARDFL
Sbjct: 129 EMIRLRYRYLDLRRPEMQANIMLRHRVAKIMRDFFDRNGFLEIETPMLCKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM SGF++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 189 VPSRLNAGEFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQP-EFTQLDIEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++Q+ IL+ ME +++ VFE+ + G  +     R+ +D+A+ R+G+DKPDLR  + + +
Sbjct: 248 SFMDQESILSLMEELVKEVFEK-TLGAHIETPLPRMSWDEAMERFGSDKPDLRFGMELQD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +T++   SEF+VF+ ++    G  V  I  +G     R   D +  + ++ G  GLA+I 
Sbjct: 307 ITDYVGGSEFKVFNAVMEA--GGRVKVINVEGYANIPRRELDGLVTYVQNYGAKGLAWIQ 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E G  +   P  K       + I+  +  + GD    +A  P        + R  +
Sbjct: 365 Y--TEEGVKS---PFKKFYADETFDTIKNAVGAKTGDLLLVVADQPAVVAQALGELRLEM 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +  G+I+ +   F W++DFP +E++ EEK+    H+PFT P+     +   D   +KA 
Sbjct: 420 GRRRGLIDPDALSFLWVVDFPMFEYSAEEKRYKAMHHPFTAPRDEDIPMLATDPGKVKAN 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R + S++  Q F  +G+S E    +FG +  AF+ G PPHGG+A
Sbjct: 480 AYDMVLNGVEIGGGSLRIYRSDLQEQVFETLGLSPEEAREKFGFMMNAFEYGTPPHGGLA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QLREL +R     KK
Sbjct: 540 FGLDRLVMLMAKRRSIRDVIPFPKTQSASDVMCQAPSPVDEKQLRELYIRTAVPKKK 596


>gi|157414919|ref|YP_001482175.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047092|sp|A8FL61|SYD_CAMJ8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157385883|gb|ABV52198.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747557|gb|ADN90827.1| Aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
          Length = 583

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/598 (40%), Positives = 351/598 (58%), Gaps = 22/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+ +    EIA
Sbjct: 2   RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120
            + R+E+VL  +G +  R    +N  + TG+IE+   K   L++  E  +P F   +   
Sbjct: 62  SNARNEFVLIAEGTIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF EQ D++N  E  L+ +F+  + G  +   F ++ Y DA+  YG+DKPDLR  +   
Sbjct: 238 MSFCEQKDVINVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+
Sbjct: 296 DVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  ++ E G     GP+ K  +  +   +  R +++ GD  FF AG       +    R 
Sbjct: 356 I--QVKEDG---LKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A EL +I+ N  EF W++DFP +E N ++      H+PFTMP+   E+    DL  I 
Sbjct: 411 FLANELNLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGG
Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 526 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|329724666|gb|EGG61172.1| aspartate--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 588

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/592 (41%), Positives = 352/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD      ++A
Sbjct: 4   RTTYCGLVTEEFLNEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALQVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ + G+V  R  ETIN  I TGQ+E+    IEI++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVQGVVTKRDTETINPKIKTGQVEVQVSNIEIINKSETPPFSINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+DI+   E++LR V ++   G  VS  F R+ Y +A+ R+G+DKPD R  + + N
Sbjct: 243 SFVDQEDIIAMGEDMLRKVVKDVK-GIDVSGPFPRMTYAEAMDRFGSDKPDTRFGMELIN 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++      F+VF    +V+   E+ AI AK       R   D + E+    G  GLA++
Sbjct: 302 VSQLGKEMNFKVFKD--TVDNNGEIKAIVAKDAANKYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ + G     GP+A+    VN E ++   + + GD   F+A  P          R  
Sbjct: 360 --KVVDDG---LSGPIARFFEDVNVETLKQLTEAKPGDLVMFVADKPNVVAQSLGALRIK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+ +   F W+ D+P  E++E+ K+   AH+PFT P+         +  +++A
Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEPENVQA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G + E  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFTNEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL+EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLQELSLRI 586


>gi|297616961|ref|YP_003702120.1| aspartyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144798|gb|ADI01555.1| aspartyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 592

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/598 (41%), Positives = 353/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTHS  ++    VG  V L+GW+   R HGG+IF+D+RD  GI Q+V +PD     F +A
Sbjct: 4   RTHSAREIAPLLVGQRVVLNGWIDTRRDHGGLIFVDLRDRSGIVQLVFSPDVDEKAFRLA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +RSE V+  +G+V  R   T N N+ TG +E+   K EI S A+  P  +    E  E
Sbjct: 64  EEMRSEHVIGAEGVVRMRPEGTENLNLETGTVEVYVDKAEIFSRAKTPPFYIEDGIEVDE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLRR  +  N+V R R+I +MR  +    F+E  TPILT S+PEGARD+LV
Sbjct: 124 HLRLRYRYLDLRRPEMKNNLVFRHRVIKAMRDFLDKRGFLEIETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G F+ALPQ+PQ +KQ+LM +G ++YFQ+A CFRDED R+DR P EF QLD+E S
Sbjct: 184 PSRVHPGEFFALPQSPQLFKQILMVAGMEKYFQVARCFRDEDLRADRQP-EFTQLDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE++DI   +E++L  V EE   G  V   FLR+ Y +A+ RYGTDKPDLR  + + +V
Sbjct: 243 FVEEEDIFELVESMLSEVIEEVM-GRRVDTPFLRLTYQEAMTRYGTDKPDLRFGLEITDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE     +F+VFS   ++  G  V A+ AK  G  +R   D +   A   G  GLA+I  
Sbjct: 302 TEIVRGVDFKVFST--AIASGGVVRALNAKTCGSFSRKEIDDLTALALKLGAKGLAWI-- 357

Query: 362 RLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                 NV   G   P+ K ++    E +   L  + GD   F A      C    + R 
Sbjct: 358 ------NVTTDGLKSPITKFISEEIMEKMLAALKAEPGDLILFGADQEEVVCRVLGNLRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++L +       F WI DFP  E+++EEK+    H+PFT P+         + L ++
Sbjct: 412 ELGKKLKLAREEDLSFVWITDFPLLEYDDEEKRYVAVHHPFTAPRIEDIPRLEQEPLRVR 471

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG E+  G IR H  E+  + FS +G+S++  + +FG L  AF+ G PPHGG
Sbjct: 472 SRAYDLVLNGTEVGGGSIRIHQRELQERMFSLLGMSQDEAKQKFGFLLEAFEYGTPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR++MLL G +++R+V  FP +Q+    + G+PS VS  QL+ELG+R+    K
Sbjct: 532 IAFGVDRLLMLLSGRESIRDVIAFPKTQSAVCPMTGAPSEVSERQLKELGIRVRSKQK 589


>gi|301795040|emb|CBW37505.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 587

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 245/597 (41%), Positives = 363/597 (60%), Gaps = 25/597 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGTVELNVTALIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  K    N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKEAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D  FF+A D L+  +    A R 
Sbjct: 353 -KVVDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVFFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSI 477
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ   +  L+G DL  +
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETVHELEG-DLAKV 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHG
Sbjct: 465 RAIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 525 GLAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|88800176|ref|ZP_01115744.1| aspartyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88777022|gb|EAR08229.1| aspartyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 590

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/600 (40%), Positives = 358/600 (59%), Gaps = 31/600 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG+L  S +   V + GWVHR R HGG+IFLD+RD  G+ QVV +PD+A  FEIA 
Sbjct: 2   RSQYCGELDSSFIDQTVTICGWVHRRRDHGGVIFLDVRDREGVMQVVFDPDAADSFEIAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R   T+N+N+ TG++EL  ++I++L+ A   P P+       E 
Sbjct: 62  RVRSEYVIQVTGRVRARPEGTVNSNMRTGEVELLGKEIQVLNKAATPPFPLDEYSGVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR++DLRR  + + ++ R++I +S+R  +  + FI+  TPIL  ++PEGARD+LVP
Sbjct: 122 VRLKYRYMDLRRPEMQQKLILRSKITSSIRRSLEDQGFIDIETPILNRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF++LPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHPGSFFSLPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDLETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ I+   E ++R +F+E    N   ++F R+ + +A+ R+G+DKPDLR P+ +  V 
Sbjct: 241 MDEEGIMAITETMIRDIFKEVL--NVEFDDFERMPFSEAMERFGSDKPDLRIPLELVTVG 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   GG    R   D   ++    G  GLAYI   
Sbjct: 299 DLMTEVEFKVFSGP-AKDPKGRVAALKVPGGNSLTRKQIDDYTKYVSIFGAKGLAYIKVN 357

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            D++    G+  P+ K L     +++  RLD QDGD  F           F AD  + + 
Sbjct: 358 -DKTDLEEGLQSPIVKFLPTDVRQSLLERLDAQDGDLIF-----------FGADKASVVN 405

Query: 422 QELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
             LG + C   E            W++DFP +E N  + ++   H+PFTMP   +E LK 
Sbjct: 406 DALGALRCKIGEDMNLYTKEWAPLWVVDFPMFEDN-GDVRLTALHHPFTMPSCSIEELKA 464

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           N   ++    YD+V NG E+  G IR H  E+    F  + I KE  E +FG L  A + 
Sbjct: 465 NPAAALSK-AYDMVLNGMELGGGSIRIHQEEMQNAVFDVLKIDKEEQEEKFGFLLSALRY 523

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G+DR+VML+ G+ ++REV  FP +Q    ++  +P  V  EQL+EL +R+
Sbjct: 524 GAPPHGGLAFGLDRLVMLMTGSDSIREVIAFPKTQTAACVMTHAPGQVEPEQLKELNIRV 583


>gi|154686896|ref|YP_001422057.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166225318|sp|A7Z750|SYD_BACA2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|154352747|gb|ABS74826.1| AspS [Bacillus amyloliquefaciens FZB42]
          Length = 592

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 247/599 (41%), Positives = 359/599 (59%), Gaps = 16/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ CG++    +G  V+L GWV + R  GG+IF+D+RD  GI QVV NPD +      A
Sbjct: 4   RTYYCGEITEKAIGETVKLKGWVQKRRDLGGLIFIDLRDRSGIVQVVFNPDVSKEALAAA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           +++R+E+VL I+G V +R   T+N N+ TG+IE+ A+ + +LS A+  P P+  +  +  
Sbjct: 64  EAIRNEYVLDIEGTVSAREEGTVNPNLKTGKIEIKAEAVTVLSTAKTPPFPISDQAADVS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R K+R+LDLRR  + + +  R ++  S+R  +    F++  TPILT SSPEGARD+L
Sbjct: 124 EDVRLKHRYLDLRRPAMFQTLQMRHQVTKSIRHFLDENGFLDIETPILTKSSPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGF+RY+Q+A CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQIFKQLLMVSGFERYYQVARCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI+   E ++  V  E + G  V     R+ Y++A+  YG+DKPD R  +++ +
Sbjct: 243 SFMSQEDIMALAEEMMAKVMLE-TKGVEVPLPLPRMTYEEAMNSYGSDKPDTRFGMLLTD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           V++    +EF+VFS   +V  G  V AI  KG  G+  R   D +  +A + G  GLA  
Sbjct: 302 VSDIVKDTEFKVFSS--AVANGGVVKAINVKGAAGDYSRKDIDALGVFAGNYGAKGLA-- 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W   E+  V   GP+AK  +      +   L+  +GD   F A D  +  + +  A R 
Sbjct: 358 -WVKVEADGVK--GPIAKFFDEEKQAKLAEALEASEGDLLLFGA-DKFEVVAQSLGALRL 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +E G+I+ + F F W++D+P  E +EEE +   AH+PFTMP      L       +K
Sbjct: 414 KLGKERGLIDESLFNFLWVVDWPLLEHDEEEGRFYAAHHPFTMPVREDLDLIETAPEDMK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+  G IR    +V  + F  +G +KE  E  FG L  AF+ G PPHGG
Sbjct: 474 AQAYDLVLNGYELGGGSIRIFEKDVQEKMFGLLGFTKEEAEEEFGYLLEAFEYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           IA G+DR+VMLL G  N+R+   FP + +   LL  +P  VS  QL EL L +    K+
Sbjct: 534 IALGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPGEVSDAQLEELHLSVKRKVKQ 592


>gi|121612173|ref|YP_001000341.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005286|ref|ZP_02271044.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|166225336|sp|A1VZ00|SYD_CAMJJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|87250283|gb|EAQ73241.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 583

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/598 (40%), Positives = 351/598 (58%), Gaps = 22/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+ +    EIA
Sbjct: 2   RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF--GEREY 120
            + R+E+VL  +G +  R    +N  + TG+IE+   K   L++  E  +P F   +   
Sbjct: 62  SNARNEFVLIAEGAIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFTIADESV 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF EQ D++N  E  L+ +F+  + G  +   F ++ Y DA+  YG+DKPDLR  +   
Sbjct: 238 MSFCEQKDVINVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+
Sbjct: 296 DVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  ++ E G     GP+ K  +  +   +  R +++ GD  FF AG       +    R 
Sbjct: 356 I--QVKEDG---LKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A EL +I+ N  EF W++DFP +E N ++      H+PFTMP+   E+    DL  I 
Sbjct: 411 FLANELNLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGG
Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 526 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|70732092|ref|YP_261848.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|97196806|sp|Q4K7D5|SYD_PSEF5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|68346391|gb|AAY93997.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 591

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/595 (41%), Positives = 353/595 (59%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLEGQEVTLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRAETFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R A   NAN+ +G IE+   ++E+L+ AE  P P+    +  E 
Sbjct: 63  RVRSEYVVKITGKVRLRPAGAGNANMASGMIEVLGYELEVLNEAETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+R+  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRMTTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI+   E ++R +F+E          F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LDEKDIMGLTEGMIRNLFKEVL--GLEFGEFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   + A+   GG    R   D   ++    G  GLAYI   
Sbjct: 300 DQLKEVEFKVFSGPAN-DPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K++   N   I  R+   DGD  FF A D  K  S A  A R  + 
Sbjct: 359 ERAKGVEGLQSPIVKNIPEANLNVILDRVGAVDGDIVFFGA-DKAKIVSEALGALRIKLG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L ++ C  +   W++DFP +E N ++      H+PFT P+   E L+ N   ++ +  
Sbjct: 418 HDLNLLTCE-WAPMWVVDFPMFEEN-DDGSFTALHHPFTAPKCSPEELEANPATAL-SRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F  +GIS+   E +FG L  A + G PPHGG+A 
Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRLLGISEAEQEEKFGFLLDALKYGAPPHGGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA+++REV  FP +Q+   ++  +P  V  + LREL +R+ E PK
Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGLVDAKALRELHIRLREQPK 589


>gi|86151553|ref|ZP_01069767.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|86153398|ref|ZP_01071602.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85841182|gb|EAQ58430.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85843124|gb|EAQ60335.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 583

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/598 (40%), Positives = 351/598 (58%), Gaps = 22/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+ +    EIA
Sbjct: 2   RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120
            + R+E+VL  +G +  R    +N  + TG+IE+   K   L++  E  +P F   +   
Sbjct: 62  SNARNEFVLIAEGAIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF EQ D++N  E  L+ +F+  + G  +   F ++ Y DA+  YG+DKPDLR  +   
Sbjct: 238 MSFCEQKDVINVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+
Sbjct: 296 DVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  ++ E G     GP+ K  +  +   +  R +++ GD  FF AG       +    R 
Sbjct: 356 I--QVKEDG---LKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A EL +I+ N  EF W++DFP +E N ++      H+PFTMP+   E+    DL  I 
Sbjct: 411 FLANELNLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGG
Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 526 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|169824555|ref|YP_001692166.1| aspartyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831360|dbj|BAG08276.1| aspartyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 588

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/590 (40%), Positives = 354/590 (60%), Gaps = 14/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG+L +SDV   V L GWV + R  G +IF+D+RD+ GITQ+    D+   F+ AK
Sbjct: 9   RTHMCGELRLSDVNKEVILMGWVQKERNLGSLIFIDLRDNTGITQIAIKDDNKEIFDKAK 68

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V+SE+VLC+ G V  R  E+ N NI TG+IE+ A ++ +L  A   P+ +  +    E+
Sbjct: 69  DVKSEYVLCVKGDV--RERESKNNNIPTGEIEVIANELIVLDTANVPPIYIKDDDNAQEA 126

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLR+  L  N+  R +    +R  +    F E  TP+L   +PEGARD+LV 
Sbjct: 127 VRLKYRYLDLRKPKLQNNLKLRAKTNKLIREYLDENGFYEIETPVLGKPTPEGARDYLVA 186

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN+  FYALPQ+PQ  KQLLM SG DRY+QI  CFRDED R++R P EF Q+DMEMSF
Sbjct: 187 SRVNEHRFYALPQSPQLMKQLLMISGMDRYYQIVKCFRDEDLRANRQP-EFTQVDMEMSF 245

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+Q+D++   E +++ +F+E   G  +     R+ Y +A+ RYG DKPDLR    + N+T
Sbjct: 246 VDQEDVMTINEGLIKKLFKEIR-GIDIPTPIKRMTYSEAMERYGCDKPDLRFGFELKNIT 304

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E    SEF+VFS     N       I       +R   D++ ++ +  G  GL+   W  
Sbjct: 305 ELVKDSEFKVFSSCNEKNKSVRCINIGNYESEYSRKKIDKLEKFVKEYGAKGLS---WIR 361

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP--LKFCSFAADARNHIA 421
              G +     + K L+     +I +    +D ++  FI  D   + F   +A  RN IA
Sbjct: 362 VHDGEI--QSSIKKFLSDEELNSI-IESTKEDENALIFILADKNDVVFNGLSA-LRNRIA 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +++ +++ + FEF WI+DFP +E++EEE +    H+PFTMP+         D   ++A  
Sbjct: 418 RDMNLVDNDTFEFVWIVDFPLFEYDEEENRFVAMHHPFTMPKEEDIQYLLTDKEKVRAKA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+VCNG EI  G IR + S++  + F  + +++E++EN+FG    AF  G PPHGG+A 
Sbjct: 478 YDIVCNGDEIGGGSIRINNSDLQKKMFEALELTEEMIENKFGFFVEAFNYGTPPHGGLAY 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++MLL+G  N+++V  FP +Q+  DLL G+P+ V  +QL+E+ +++
Sbjct: 538 GMDRLMMLLVGTDNIKDVIAFPKTQSATDLLTGAPTNVDEKQLKEIHIKL 587


>gi|118594331|ref|ZP_01551678.1| aspartyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118440109|gb|EAV46736.1| aspartyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 597

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 235/589 (39%), Positives = 353/589 (59%), Gaps = 5/589 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG+L    +   V L GW HR R HGG+IF+D+RD+ G+ Q+V +PD+   F  A+
Sbjct: 2   RTHYCGELNRDHIDQEVILCGWAHRRRDHGGVIFIDLRDNKGLAQIVIDPDTKEAFSTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+VL +   V  R   T+N N+ TG++E+ A  +EIL+ +   P  +  +    ES
Sbjct: 62  SIRNEYVLKVTCKVRLRPEGTVNKNLPTGEVEMLASTVEILNASLTPPF-MLDDDTITES 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR ++RF+DLRRD + KN+  R  I  ++R  +  E+FIE  TPILT S+PEGARD+LVP
Sbjct: 121 IRLEHRFIDLRRDQMQKNMKLRYDISKNIRQYLDHESFIEIETPILTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQ+LM SGFDRYFQIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHHGEFFALPQSPQLFKQILMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIEASF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+++DI++  EN+ R +F++  +  ++  +F R+ Y +A+ R+G+DKPDLR  + +  +T
Sbjct: 240 VDEEDIMSIAENMTREMFKKVMD-QSLPQSFPRMTYQEAMHRFGSDKPDLRVTLELIELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E     +F+VFS   +++ G         G   +R+  D   E+ +  G  GLAYI    
Sbjct: 299 EEMKDVDFKVFSSAANMDNGRVAALRIPNGAELSRSEIDAYTEFVKIYGAKGLAYIKIND 358

Query: 364 DESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               N  G+  P+ K++++   +AI  +   ++GD  FF A             R  I  
Sbjct: 359 KNLLNEEGLQSPIVKNIHVDALKAIIEKTSAENGDLVFFGADKRTVVNEALGALREKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +   +    +   WI+DFP ++++EE  + +  H+PFT P+ G E L   D  +  +  Y
Sbjct: 419 DKKHLTNEPWAPVWIVDFPMFDFDEEGNRWNALHHPFTSPKDGHEGLLETDPGNCLSKAY 478

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H   V  + F  + IS E    +FG L  A Q G PPHGG+A G
Sbjct: 479 DMVINGWEVGGGSIRIHQQTVQSKVFKALNISDEEAREKFGFLLDALQYGAPPHGGLAFG 538

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR+  LL GA ++R+V  FP +Q    L+  +P+ V  +QLREL +++
Sbjct: 539 LDRLATLLAGADSIRDVIAFPKTQKAQCLMTQAPNMVDEKQLRELHIKV 587


>gi|332198927|gb|EGJ13008.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 587

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/595 (40%), Positives = 355/595 (59%), Gaps = 21/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEKEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              +D   N    GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVADTLEVVNATLGTLRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|229828383|ref|ZP_04454452.1| hypothetical protein GCWU000342_00444 [Shuttleworthia satelles DSM
           14600]
 gi|229792977|gb|EEP29091.1| hypothetical protein GCWU000342_00444 [Shuttleworthia satelles DSM
           14600]
          Length = 602

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/602 (39%), Positives = 363/602 (60%), Gaps = 14/602 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           +R+  C +L  +++G  V L GWV + R  G +IF+D+RD  G+ Q++ +     S  F 
Sbjct: 9   HRSCRCAELSEANIGQTVTLMGWVQKRRNLGSLIFVDLRDRSGLMQILFDEKIVGSEGFA 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  VRSE+VL + G V  R A  IN N+ TG IEL+A+ I +LS +E  P P+    + 
Sbjct: 69  RAGGVRSEYVLAVTGRVQKREA-AINENLKTGSIELAAESIRVLSESEVPPFPIEDGIKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + KN++ R+++ N +R  M  + F+E  TP+L  S+PEGARD+
Sbjct: 128 KDELRLKYRYLDLRRPEMQKNLILRSQVTNLIRKYMAEDGFLEIETPMLQKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 188 LVPSRVHPGSFYALPQSPQLFKQLLMVSGFDRYFQIARCFRDEDLRADRQP-EFTQVDLE 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+ +D+L T   +LR VF + + G  + +   R+ + +A+ R+G+DKPD R  + + 
Sbjct: 247 MSFVDMEDVLETTSRLLRNVFRD-AIGVEIPDPIPRMTWQEAMERFGSDKPDTRFGMELI 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           +V++      F VF+  L+      V  I  +G G   R   D++ + A++ G  GLAYI
Sbjct: 306 DVSDVVADCGFSVFTSALASKG--TVRGINVRGQGDMGRKKIDKLVDLAKACGAKGLAYI 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R D++   +     +K ++      +   +D Q GD   F A             R  
Sbjct: 364 QCRSDDTVKSS----FSKFMSEEKMSDLIKAMDAQAGDLLLFTADRFKTAVEVLGQIRLT 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIK 478
           +A+EL +I  + F F W++DFP +EW++E+ +    H+PFTMP +  ++ L+  DL SI+
Sbjct: 420 LARELELIPEDQFNFLWVVDFPAFEWSDEQNRFLAMHHPFTMPYEEDLDKLESGDLSSIR 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H  ++  + F  +G S E   +RFG L  AF+ G+PPH G
Sbjct: 480 SKAYDIVLNGVELGGGSIRIHQDDIQERMFKALGFSLEEARDRFGFLLTAFEYGVPPHAG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +A G+DR++ML+  A ++R+V  FP  ++  DL+  +P  V  +QL EL L+ + + ++ 
Sbjct: 540 LAFGLDRMIMLMTSADSIRDVIAFPKVKDASDLMTQAPGPVDDKQLEELYLKTLSDGQEK 599

Query: 599 LK 600
           +K
Sbjct: 600 IK 601


>gi|239637565|ref|ZP_04678537.1| aspartyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596783|gb|EEQ79308.1| aspartyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 588

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/592 (40%), Positives = 348/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD       IA
Sbjct: 4   RTTYCGLVTEDLLNEKVTLKGWVHNRRDLGGLIFIDLRDREGIVQIVFNPDFSQEALNIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+++ + G+V  R AET+N  I TGQ+E+    IEI++ +E  P  +  E     
Sbjct: 64  ETVRSEYIVEVQGVVTKRDAETVNPKIKTGQVEVQVSNIEIINKSETPPFSINEENTNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDDNGFYDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +LR V ++   G  V   F R+ Y +A+ RYG+DKPD R  + + N
Sbjct: 243 SFVDQEDVMAMGEEMLRKVVKDV-KGIDVPGPFPRMTYSEAMSRYGSDKPDTRFDMELIN 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF   +  N   E+ AI AK       R   D + E+    G  GLA++
Sbjct: 302 VSQLGHDMDFKVFKDTVENNG--EIKAIVAKDAADQYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ + G     GP+A+     +TE ++   +   GD   F+A  P          R  
Sbjct: 360 --KVTDEGLT---GPIARFFEDKDTEQLKSLTEASAGDLVMFVADKPEVVAQSLGALRIK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+ +   F W+ D+P  E+++E K+   AH+PFT P+        ++  + +A
Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDDESKRYVAAHHPFTSPKKEDIEKLDSEPENAQA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHNGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSEKQLEELSLRI 586


>gi|307150082|ref|YP_003885466.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306980310|gb|ADN12191.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 595

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/610 (40%), Positives = 362/610 (59%), Gaps = 35/610 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFE 60
           RTH CG+L  SD+   V L GWV R R HGG+IF D+RD  G+ Q+V++    P+S  ++
Sbjct: 2   RTHYCGELRASDIDKTVTLFGWVDRYRDHGGVIFADLRDRTGVVQIVSDSQRTPES--YQ 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGERE 119
            A ++R+E+V+ ++G V  R  E++N  I TG++E+ A  IEIL+ V ++LP  V  E  
Sbjct: 60  AAATLRNEYVIKVEGRVSKRPPESLNPKIPTGEVEIYADSIEILNGVNKQLPFVVSSEEA 119

Query: 120 --YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEG 176
               E +R KYR+LDLRR+ +  N+  R +++ +MR  +   +NFIE  TPILT S+PEG
Sbjct: 120 ELVREEVRLKYRYLDLRRERMMNNLKLRHQVVKAMRRYLEDQQNFIEVETPILTRSTPEG 179

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR N G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q
Sbjct: 180 ARDYLVPSRANPGKWYALPQSPQLFKQLLMVSGVDRYYQIARCFRDEDLRADRQP-EFTQ 238

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEMSF+  D+IL   E ++  +F+   N + +     R+ Y DA+ +YGTD+PD R  
Sbjct: 239 LDMEMSFMSLDEILELNEGLIAHIFKSTKNID-IPLPLPRLTYTDAMGKYGTDRPDTRFG 297

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA----------KGGGGNRAFCDRMNE 346
           + + +V+E      F+VFS  +S     ++  IP           K GG        + +
Sbjct: 298 LELVDVSEIVKDCAFKVFSGAVSSGGVVKILPIPEAANVISNVQIKPGG-------ELFK 350

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406
            A   G  G+AYI  R+ E   +  +  +  +L+    + +  +   + G    F AGD 
Sbjct: 351 EAAEAGAKGIAYI--RIKEGNELDTIAAIKDNLSEEQKQQLIEKTGAKPGYLLLFGAGDV 408

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
                  A  R  + ++LG+I+ N     W+ DFP +EWN EEK+++  H+PFT P+   
Sbjct: 409 DTVNKSLARLRLVVGEKLGLIDKNKINLLWVTDFPMFEWNAEEKRLEALHHPFTAPKP-- 466

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
           E L  +DL   +A  YD+V NG EI  G +R +  ++  + F+ +G+S E   ++FG L 
Sbjct: 467 EDL--HDLSHARALAYDMVFNGIEIGGGSLRIYQRDIQEKVFATIGLSMEEAYSKFGFLL 524

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            AF+ G PPHGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +PSTV  +QL+E
Sbjct: 525 EAFEYGTPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQASCLLTEAPSTVEPKQLKE 584

Query: 587 LGLRIVENPK 596
           L +     PK
Sbjct: 585 LHIASTFKPK 594


>gi|255322548|ref|ZP_05363693.1| aspartyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300456|gb|EET79728.1| aspartyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 594

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/598 (41%), Positives = 349/598 (58%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
           + R+H C DL  +D+G  V L GWV+  R HGG+IFLD+RD  G+ Q+V +P    +  E
Sbjct: 11  KMRSHYCTDLSSADIGKEVTLCGWVNTYRDHGGVIFLDLRDRTGLIQIVCDPADSKSSHE 70

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  VR E+VL I G V +R    +N  + TG+IE+ A ++ + + +E LP  V G+   
Sbjct: 71  AASHVRDEYVLRIKGKVRARGEGLVNPRLKTGEIEVVADEVIVENPSETLPF-VIGDESV 129

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYRFLDLR + L      R++   + R  +    FIE  TPILT ++PEGARD+
Sbjct: 130 NEDIRLKYRFLDLRNEKLQNIFKMRSKAAIAARNSLDKMGFIEFETPILTRATPEGARDY 189

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 190 LVPSRVYPGQFYALPQSPQLFKQLLMCSGFDKYFQIAKCFRDEDLRADRQP-EFTQIDIE 248

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+ Q+DILN  EN+L+ VF   + G  +   F R+ Y +A   YG+DKPDLR  + M 
Sbjct: 249 MSFIGQEDILNMAENMLKDVFA--ACGYDIQIPFRRMSYKEATETYGSDKPDLRYDLKMI 306

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V + F  S   +FSKI +      + A+    G    ++   +R  E+ R  G  GL Y
Sbjct: 307 DVIDIFARSSNEIFSKIATEPKKNRIKALKVPNGDNIFSKREMNRFEEFVRKFGAQGLGY 366

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
             +++ E G     GP+ K     + + I  R +++ GD  FF AG       +    R 
Sbjct: 367 --FQMKEDGL---KGPLCKFFEQSDLDEIVERCELKVGDVVFFGAGKKKVVLDYMGRFRI 421

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+++GII+ N  EF W++DFP +E N ++      H+PFTMP+    ++   DL  I 
Sbjct: 422 FLAEQMGIIDQNKMEFLWVLDFPMFEQN-DDGSYSAMHHPFTMPK----NIDEPDLEDIL 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  +D+V NG+E+  G +R H ++V  + F  +GI +     +FG L  A   G PPHGG
Sbjct: 477 SVAHDVVLNGYELGGGSVRIHKNDVQQKVFKLLGIDEAEQREKFGFLLDALSFGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G DR+ ML+    ++R+V  FP +Q     L  +PS  S EQLRELGLR+ E  K
Sbjct: 537 IAIGFDRLNMLVNKTSSIRDVIAFPKTQRAQCPLTKAPSEASGEQLRELGLRLREKEK 594


>gi|332701713|ref|ZP_08421801.1| aspartyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332551862|gb|EGJ48906.1| aspartyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 609

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/595 (39%), Positives = 351/595 (58%), Gaps = 16/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG L  +DVG+ V L GWV   R HGG+IF+D+RD  G+TQVV +P +A      A
Sbjct: 23  RTHDCGALRATDVGAKVCLMGWVQFRRDHGGLIFIDLRDRAGLTQVVFDPQAAPTAHSRA 82

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+V+ I G V  R     N  + TG IE+    I++L+ A+  P  +    E  E
Sbjct: 83  HVLRSEYVVAIMGTVRERPEGMHNPKMGTGDIEILVSDIKLLNTAQTPPFEIEDRSEPTE 142

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++ KYR+LDLRR  + +N++ R +   ++R  +    F+E  TP+LT S+PEGARDFLV
Sbjct: 143 QLKLKYRYLDLRRPKMARNMILRHKTAQAVRTYLDRHGFLEIETPVLTKSTPEGARDFLV 202

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+NQG F+ALPQ+PQ +KQLLM +G +RY+QI  CFRDED R+DR P EF Q+DME++
Sbjct: 203 PSRLNQGEFFALPQSPQLFKQLLMVAGLERYYQIVRCFRDEDLRADRQP-EFTQIDMELT 261

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++  +++  E ++  VF++  +   + + F R+ + +A+R YG DKPD+R  + +  V
Sbjct: 262 FVDEAQVMDIAEGMIHTVFKQVLDVE-LPSPFPRMSHFEAMRDYGVDKPDIRFGLKLFEV 320

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+ F  S F+VF+    V       A+   GG   +R   D   E+ +  G  GLA+I  
Sbjct: 321 TDIFKGSNFKVFASSELVK------AVRVPGGESLSRKEIDDFTEFVKIYGSQGLAWIKI 374

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE  +     P+ K  +     A+  RL +  GD  FF AG          + R  + 
Sbjct: 375 KGDEWQS-----PIVKFFSPEEKSALAERLGIVSGDIVFFQAGPKAVVNPAIGNLRLKLG 429

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + +G+I    F   W+ DFP  E++ +EK+    H+PFT PQ     L  +D   + +  
Sbjct: 430 ERMGLIPAGTFAPLWVTDFPLLEYDADEKRWAAMHHPFTQPQLETLPLMDSDPGKVLSRA 489

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+EI  G IR H  E+  + F  +GI  E  E +FG + +A + G PPHGGIA 
Sbjct: 490 YDIVLNGYEIGGGSIRIHTREMQARMFQALGIGAEEAEAKFGFMLQAMEHGAPPHGGIAF 549

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DRI+ML+ GA ++R+V  FP +Q    ++ G+PSTV+ +QLRELG+++ E  K
Sbjct: 550 GLDRIIMLMTGAPSIRDVIAFPKTQKATCMMTGAPSTVAGKQLRELGIKLREAAK 604


>gi|237752831|ref|ZP_04583311.1| aspartyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376320|gb|EEO26411.1| aspartyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 583

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 344/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H C DLG  ++G  V L GW +  R HGG++F+D+RD  G+ Q+V +P       +IA
Sbjct: 2   RSHYCADLGEQNIGEVVSLCGWCNTYRDHGGVVFIDLRDRSGLVQLVFDPKDCQEAHKIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL   G V  R     N  + TG+IE+  + + + + +   P+ V G+    E
Sbjct: 62  SEVRDEYVLIAKGKVRRRGEGLENPKLKTGKIEVLVESLVVENKSLTPPIAV-GDESVGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   L +  + R+++  + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 DVRLKYRYLDLRNPRLQEIFITRSKVTQATRNTLSDLGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R DR P EF Q+D+EMS
Sbjct: 181 PSRVHHGEFYALPQSPQLFKQLLMVSGFDRYFQIAKCFRDEDLRLDRQP-EFTQIDLEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   DD++   E VL+ +F   + G T++  F R  Y + +  YG+DKPDLR  +    V
Sbjct: 240 FCNADDVMGVAEAVLKSIFN--ACGITIATPFERYSYKEVMESYGSDKPDLRFDLPFVEV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            + FV S   +F+ I          A+  KGG    +R       E+ R  G  GLAYI 
Sbjct: 298 GDLFVDSSNDIFASIAKDPKKNRFKALCVKGGDTFFSRKTLGEAEEFVRKFGAKGLAYI- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ E G     GP+ K ++  N + +  R     GD  FF AG+      +    R  I
Sbjct: 357 -QIKEEG---AKGPLVKFISEANLKILLERAGASVGDIIFFGAGEKKIVWDYMGRLRQKI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           AQ++ +I+ N ++F W++DFP +E N ++  I   H+PFTMP     +L+  DL  I + 
Sbjct: 413 AQDMDLIDKNAYKFLWVVDFPMFERN-DDGSISALHHPFTMPS----NLEVEDLEEINSV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NGFEI  G IR H  E+  + F  +GISKE  +++F  L  A Q G PPHGG+A
Sbjct: 468 AYDVVLNGFEIGGGSIRIHKQEIQSRVFDLLGISKEEAQDKFSFLLEALQFGAPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DRI+MLL  A ++R+V  FP +Q     L  +PS  + EQLREL +R+ E  +
Sbjct: 528 FGLDRIIMLLCKAHSIRDVIAFPKTQKATCPLTDAPSVANEEQLRELHIRVRETKR 583


>gi|56750249|ref|YP_170950.1| aspartyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|62287522|sp|Q5N5I8|SYD_SYNP6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56685208|dbj|BAD78430.1| aspartyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
          Length = 599

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 357/596 (59%), Gaps = 25/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG+L    VG+ V L GWV R R HGG+IF+D+RD  G  Q+V++P+     +  A
Sbjct: 2   RTHYCGELRAEQVGTSVTLYGWVDRRRDHGGVIFVDLRDRTGTVQIVSDPERTPESYHQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFG--ERE 119
           + +R+E+V+ I G V  R AE++N  + TG++E+ A +IEIL +V  +LP  V    E  
Sbjct: 62  EGLRNEYVVKITGRVSGRPAESLNPKLPTGEVEIYADRIEILNAVRRQLPFQVSSADEET 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA--ENFIECSTPILTASSPEGA 177
             E +R +YR+LDLRRD +++N+  R +++ ++R R +   E FIE  TP+LT S+PEGA
Sbjct: 122 VREDLRLRYRYLDLRRDRMNRNLQLRHQVVKAIR-RFLEDEEQFIEIETPVLTKSTPEGA 180

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRVN G ++ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF QL
Sbjct: 181 RDYLVPSRVNPGEWFALPQSPQLFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQL 239

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF+ Q++I++  E ++  +F+    G  +   F R+ Y +A+ RYG+D+PD R  +
Sbjct: 240 DMEMSFLSQEEIIDLNERLIAHIFKTV-KGIELPRPFPRLTYAEAMDRYGSDRPDTRFGL 298

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN------EWARSQ 351
            + +V++      F+VFS  +      ++  IP    G +R    R+       + A   
Sbjct: 299 KLVDVSDVVADMGFKVFSGAVKSGGKVKILPIP---DGNDRISNVRIKPGGDIFKEATEA 355

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLAYI  R+ E+G +  +G +  +L+      I  R   Q G    F AG       
Sbjct: 356 GAAGLAYI--RVRENGEIDTIGAIKDNLSDEQKAEILRRTQAQPGTLLLFGAGSTDIVNK 413

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
                R  + +ELG+I+       W++DFP  EWN +EK+ +  H+PFT P    + L+ 
Sbjct: 414 SLDRVRQFLGKELGLIDPEALNLLWVVDFPMVEWNADEKRYEALHHPFTAPNP--QDLE- 470

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            DL + +A  YD+V NG EI  G +R +  ++  + F  +G+S E  + +FG L  AF  
Sbjct: 471 -DLTTARAQAYDIVLNGLEIGGGSLRIYQRDIQERVFETIGLSHEEAQAKFGFLLEAFDF 529

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           G PPHGGIA G+DR+VMLL G +++R+   FP +Q    LL  +P+ VS  QL+EL
Sbjct: 530 GTPPHGGIAYGLDRLVMLLTGEESIRDAIAFPKTQQARCLLTEAPADVSDRQLKEL 585


>gi|229592304|ref|YP_002874423.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|259511867|sp|C3JYT1|SYD_PSEFS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229364170|emb|CAY51826.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 591

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/598 (41%), Positives = 367/598 (61%), Gaps = 17/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  +  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNETLEGQEITLCGWVHRRRDHGGVIFLDIRDRDGLAQVVFDPDRAESFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R A  +N N+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKITGKVRLRPAGAVNKNMASGGIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R +YRFLDLRR  + + +  R+R+  S+R R + EN F++  TPILT ++PEGARD+LV
Sbjct: 123 TRLRYRFLDLRRPEMAEKLRLRSRMTTSIR-RFLDENGFLDVETPILTRATPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 182 PSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++ +I+   E ++R +F+E    +    +F  + +++A+RRYG+DKPDLRNP+ + +V
Sbjct: 241 FLDEKEIMGLTEQMIRNLFKEVL--DLEFGDFPHMTFEEAMRRYGSDKPDLRNPLELVDV 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     +F+VFS   + +P   + A+   GG    R   D   ++    G  GLAYI  
Sbjct: 299 ADQLKDVDFKVFSGPAN-DPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYI-- 355

Query: 362 RLDESGN-VAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
           +++E  N V G+  P+ K++ + N  AI  R+   DGD  FF A D  K  S A  A R 
Sbjct: 356 KVNERANGVDGLQSPIVKNIPLDNLNAILDRVGAVDGDIVFFGA-DKAKIVSEALGALRI 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  +L ++ C  +   W++DFP +E N ++      H+PFT P+     L+ N   ++ 
Sbjct: 415 KLGHDLNLLTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCSPAELEANPAGAL- 471

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H  E+    F  +GI++   E +FG L  A + G PPHGG
Sbjct: 472 SRAYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGINEAEQEEKFGFLLDALKYGAPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 532 LAFGLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLRETPK 589


>gi|297588537|ref|ZP_06947180.1| aspartate--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297573910|gb|EFH92631.1| aspartate--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 588

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/590 (40%), Positives = 355/590 (60%), Gaps = 14/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAK 63
           RTH CG+L +SDV   V L GWV + R  G +IF+D+RD+ GITQ+ + + +   F+ AK
Sbjct: 9   RTHMCGELRLSDVNKEVILMGWVQKERNLGSLIFIDLRDNTGITQIAIKDNNKEIFDKAK 68

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V+SE+VLC+ G V  R  E+ N NI TG+IE+ A ++ +L  A   P+ +  +    E+
Sbjct: 69  DVKSEYVLCVKGDV--RERESKNNNIPTGEIEVIANELIVLDTANVPPIYIKDDDNAQEA 126

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLR+  L  N+  R +    +R  +    F E  TP L   +PEGARD+LV 
Sbjct: 127 VRLKYRYLDLRKPKLQNNLKLRAKTNKLIRDYLDENGFYEIETPFLGKPTPEGARDYLVA 186

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN+ SFYALPQ+PQ  KQLLM SG DRY+QI  CFRDED R++R P EF Q+DMEMSF
Sbjct: 187 SRVNEHSFYALPQSPQLMKQLLMISGMDRYYQIVKCFRDEDLRANRQP-EFTQVDMEMSF 245

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+Q+D++   E +++ +F+E   G  +     R+ Y +A+ RYG DKPDLR    + N+T
Sbjct: 246 VDQEDVMTLNEGLIKKLFKEIR-GIDIPTPIKRMTYAEAMERYGCDKPDLRFGFELKNIT 304

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E    SEF+VFS     N       I       +R   D++ ++ +  G  GL+   W  
Sbjct: 305 ELVKDSEFKVFSSCNDKNKSVRCINIGNYESEYSRKKIDKLEKFVKEYGAKGLS---WIR 361

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP--LKFCSFAADARNHIA 421
              G +     + K L+     +I +    +D ++  FI  D   + F   +A  RN IA
Sbjct: 362 VHDGEI--QSSIKKFLSDEEMNSI-IESTKEDENALIFILADKNDVVFNGLSA-LRNKIA 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +++ +++ + FEF WI+DFP +E++EEE +    H+PFTMP+         D   ++A  
Sbjct: 418 RDMNLVDNDTFEFVWIVDFPLFEFDEEENRFVAMHHPFTMPKEEDIQYLLTDKEKVRAKA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+VCNG EI  G IR + S++  + F  + +++E++EN+FG    AF  G PPHGG+A 
Sbjct: 478 YDIVCNGDEIGGGSIRINNSDLQKKMFEALELTEEMIENKFGFFVEAFNYGTPPHGGLAY 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++MLL+G  N+++V  FP +Q+  DLL G+PS V  +QL+E+ +++
Sbjct: 538 GMDRLMMLLVGTDNIKDVIAFPKTQSATDLLTGAPSNVDEKQLKEIHIKL 587


>gi|307710971|ref|ZP_07647394.1| aspartyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617211|gb|EFN96388.1| aspartyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 587

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/596 (40%), Positives = 358/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPV+K L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVSKFLTSIQAE-LTTALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDGDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G   E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFLAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|312962762|ref|ZP_07777250.1| Aspartyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311282979|gb|EFQ61572.1| Aspartyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 591

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/598 (41%), Positives = 367/598 (61%), Gaps = 17/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  +  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNETLEGQEITLCGWVHRRRDHGGVIFLDIRDRDGLAQVVFDPDRAESFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R A  +N N+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKITGKVRLRPAGAVNKNMASGGIEVLGYELEVLNESEPPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R +YRFLDLRR  + + +  R+R+  S+R R + EN F++  TPILT ++PEGARD+LV
Sbjct: 123 TRLRYRFLDLRRPEMAEKLRLRSRMTTSIR-RFLDENGFLDVETPILTRATPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 182 PSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++ +I+   E ++R +F+E    +    +F  + +++A+RRYG+DKPDLRNP+ + +V
Sbjct: 241 FLDEKEIMGLTEQMIRNLFKEVL--DLEFGDFPHMTFEEAMRRYGSDKPDLRNPLELVDV 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     +F+VFS   + +P   + A+   GG    R   D   ++    G  GLAYI  
Sbjct: 299 ADQLKEVDFKVFSGPAN-DPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYI-- 355

Query: 362 RLDESGN-VAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
           +++E  N V G+  P+ K++ + N  AI  R+   DGD  FF A D  K  S A  A R 
Sbjct: 356 KVNERANGVDGLQSPIVKNIPLDNLNAILDRVGAVDGDIVFFGA-DKAKIVSEALGALRI 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  +L ++ C  +   W++DFP +E N ++      H+PFT P+     L+ N   ++ 
Sbjct: 415 KLGHDLNLLTCE-WAPMWVVDFPMFEEN-DDGSFSALHHPFTAPKCSPAELEANPAGAL- 471

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H  E+    F  +GI++   E +FG L  A + G PPHGG
Sbjct: 472 SRAYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGINEAEQEEKFGFLLDALKYGAPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 532 LAFGLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLRETPK 589


>gi|322388563|ref|ZP_08062164.1| aspartate--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140602|gb|EFX36106.1| aspartate--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 626

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/596 (40%), Positives = 358/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+   +     
Sbjct: 42  RSMYAGRVREEHIGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEKVSAGVMAT 101

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 102 AESLRSEFVIEVTGQVEAR--EQANDKLATGAVELNVTALTVLNTAKTTPFEIKDGIEAN 159

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 160 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 219

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 220 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 278

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 279 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFEMLLQD 337

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +T+     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 338 LTDLVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 391

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  + +   L ++D D   F+A D L+  +    A R 
Sbjct: 392 -KVVDGELN----GPVAKFLTSIQGD-LTSALGLEDKDLVLFVA-DTLEVANATLGALRG 444

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 445 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQADTAHELEGDLAKVR 504

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E+  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 505 AIAYDIVLNGYELGGGSLRINQKELQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 564

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ ++
Sbjct: 565 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELNLQVEQD 620


>gi|322386522|ref|ZP_08060149.1| aspartate--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269441|gb|EFX52374.1| aspartate--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 584

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 239/599 (39%), Positives = 356/599 (59%), Gaps = 25/599 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  + L GWV R R  GG+IF+D+RD  GI Q+V NP+S   E+   
Sbjct: 3   RSMYAGRVRSEHVGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPESVSDEVMKT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E +N  + TG +EL    + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGKVAAR--EQVNDKLATGSVELHVDSLIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP LT S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA+I  
Sbjct: 299 LTELVKDVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWI-- 352

Query: 362 RLDESGNVAG---MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
                  +AG    GPVAK L  +++E +   L +++ D   F+A D L   + A  A R
Sbjct: 353 ------KLAGGELTGPVAKFLTDLSSE-LTTALQLEENDLVLFVA-DTLDVANAALGALR 404

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + +ELG+I+   F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  +
Sbjct: 405 VRLGKELGLIDPAKFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQRDSEQELEGDLSKV 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  ++  + F  +G S E  +++FG L  A   G PPHG
Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEAQDQFGFLLEAMDYGFPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+A G+DR VMLL G +N+REV  FP +    D +  +PS V+  QL EL L++  + K
Sbjct: 525 GLALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSLVAPAQLEELSLQVESHEK 583


>gi|254422068|ref|ZP_05035786.1| aspartyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196189557|gb|EDX84521.1| aspartyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 598

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/606 (39%), Positives = 358/606 (59%), Gaps = 27/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+  CG L    +   V L GWV R R HGG++FLD+RD  G  Q+V++P+   A + +A
Sbjct: 2   RSLYCGQLRAEQIEKTVTLYGWVDRRRDHGGVVFLDLRDRTGTVQIVSDPERTPASYPVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG--ERE 119
           + VR+E+V+ + G V  R  E++N  + TG++E+ A ++ ILS V +++P  V    E  
Sbjct: 62  EEVRNEYVVKVVGRVTQRPPESLNEKLPTGEVEIYADELTILSAVRKQMPFQVSTAEEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGA 177
             E +R KYR+LDLRRD +  N+  R  ++ ++R R +   E+F+E  TPILT S+PEGA
Sbjct: 122 VREDLRLKYRYLDLRRDRMAHNMRLRHEVVKAIR-RFLEDQEDFMEVETPILTRSTPEGA 180

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RDF++PSRVN+G ++ALPQ+PQ +KQ+LM +G DRY+QIA CFRDED R+DR P EF QL
Sbjct: 181 RDFILPSRVNEGEWFALPQSPQLFKQILMVAGVDRYYQIARCFRDEDLRADRQP-EFTQL 239

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF++Q++IL   E +L  +F+    G  +   F R+ Y +A+ RYG+DKPD R  +
Sbjct: 240 DMEMSFMDQEEILGLNEKLLAHIFKAV-KGVDIPIPFPRLTYQEAMDRYGSDKPDTRYGM 298

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARS 350
            + +V++    S F+VFS  ++     +V  IP    GGN A  +        + + A  
Sbjct: 299 ELVDVSDIVKDSGFKVFSGAVASGGQVKVLPIP----GGNEAISNVRIKPKGDLFKVATD 354

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
            G  G+AYI  R+ E G +  +G +  +L     + +  R   Q G    F AG      
Sbjct: 355 AGARGVAYI--RVREGGEIDTIGAIKDNLTTEQKQVLLERTGAQPGHLLLFGAGSISTVN 412

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           +     R  IA EL +I+ +  +  W+ DFP +EWN +E + +  H+PFT P        
Sbjct: 413 ATLDKLRQAIAAELKLIDESKTDLLWVTDFPMFEWNADENRYEALHHPFTAPHPD----D 468

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             DL + +A  YD+V NG+EI  G +R +  +V  + F  +G+S E   ++FG L  AF+
Sbjct: 469 VEDLTTARAVAYDIVFNGYEIGGGSLRIYQPDVQAKVFETIGLSSEEANDKFGFLLEAFE 528

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR+VMLL G +++R+   FP +Q   DLL  +PS V  +QL+EL + 
Sbjct: 529 YGTPPHGGIAYGLDRLVMLLAGEQSIRDAIAFPKTQQARDLLTHAPSRVDDKQLKELSVA 588

Query: 591 IVENPK 596
               PK
Sbjct: 589 STYKPK 594


>gi|86149910|ref|ZP_01068139.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85839728|gb|EAQ56988.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
          Length = 583

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/598 (40%), Positives = 349/598 (58%), Gaps = 22/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H   DLG+S VG  V+L GW +  R HGG+IF+D+RD  GI Q+V +P+ +    EIA
Sbjct: 2   RSHYNTDLGISHVGQSVKLCGWANSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120
            + R+E+VL  +G +  R    IN  + TG+IE+   K   L++  E  +P F   +   
Sbjct: 62  SNARNEFVLIAEGTIRPRGEGLINPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF EQ D++N  E   + +F+  + G  +   F ++ Y DA+  YG+DKPDLR  +   
Sbjct: 238 MSFCEQKDVINVAETFFKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+
Sbjct: 296 DVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  ++ E G     GP+ K  +  +   +  R +++ GD  FF AG       +    R 
Sbjct: 356 I--QVKEDG---LKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A EL +I+ N  EF W++DFP +E N ++      H+PFTMP+   E+    DL  I 
Sbjct: 411 FLANELKLIDPNTLEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGG
Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR++ML+ GA N+REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 526 IAIGLDRLIMLVTGANNIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|332071188|gb|EGI81683.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 587

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/596 (40%), Positives = 358/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F  + YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPHMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 -KVVDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|206891126|ref|YP_002248460.1| aspartyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|226736546|sp|B5YJP5|SYD_THEYD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|206743064|gb|ACI22121.1| aspartyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 594

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 245/603 (40%), Positives = 364/603 (60%), Gaps = 27/603 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61
           +R   C ++   ++G  + L GWV R R HGG+IF+D+RD  GI QVV +P+ +    + 
Sbjct: 2   FRDKYCAEVKEEEIGKEISLCGWVFRRRDHGGLIFIDLRDRTGIIQVVFSPEISIEMHQK 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+V+ + G++  R   T N  +ITG +EL A+++EILS ++ LP  +    E  
Sbjct: 62  AHGLRSEYVIAVKGILKKRPEGTENPELITGNVELWAKELEILSFSKPLPFQLDEMAEVS 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  + KN + R RI  ++R  + ++ F+E  TP+LT S+PEGARDFL
Sbjct: 122 ELLRLKYRYLDLRRAEMQKNFLLRHRITMAVRNFLDSKGFVEVETPMLTKSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G+FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 182 VPSRLNPGTFYALPQSPQLFKQILMMSGFDRYFQIVRCFRDEDLRADRQP-EFTQIDFEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ +DI+  +E +L   F+E    + +   F R+ Y++AI +YG+DKPDLR  + + +
Sbjct: 241 SFVKPEDIIEIVEEMLFKCFKEVLEVD-IEIPFKRLTYEEAINKYGSDKPDLRFALEIQD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360
           V+E   +S+F+VF  + ++  G  V AI  KG    +R+  D++   A+S G  GLA+I 
Sbjct: 300 VSELVKNSQFKVF--LDTIEKGGVVKAICGKGLASLSRSEIDKLTALAQSFGAKGLAWI- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                        P+ K  +      I  ++ ++DGD   F+A             R  I
Sbjct: 357 -----KVKNGFESPIVKFFSESLLREIAEKVGVEDGDMILFVADKKSLANEVLGRLRLEI 411

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESL---------- 469
           A E   I    F F W++DFP +EW+EEEK+    H+PFT P+   ++ L          
Sbjct: 412 A-ERAQIKKEGFYFAWVLDFPLFEWDEEEKRFVSMHHPFTSPKDEDIDKLLKIPQEAFYD 470

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
             + +  IKA  YD+V NG+E+  G IR H +++    F  + IS+E ++ RFG    A 
Sbjct: 471 PQSSVKDIKAKAYDIVLNGYELGGGSIRIHKADIQEHIFRILAISEEEIKRRFGFFVEAL 530

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELG 588
           + G PPHGGIA G+DR+VM++ GA ++R+V  FP +Q  FC  L  +PS V+++QLREL 
Sbjct: 531 RYGAPPHGGIALGLDRLVMVMTGANSLRDVIAFPKTQKAFCP-LSEAPSEVNLKQLRELH 589

Query: 589 LRI 591
           +++
Sbjct: 590 IKL 592


>gi|194017133|ref|ZP_03055745.1| aspartyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194011001|gb|EDW20571.1| aspartyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 594

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/598 (40%), Positives = 351/598 (58%), Gaps = 14/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG++    +G  V L GWV + R  GG+IF+D+RD  GI Q V NPD      E A
Sbjct: 6   RTFYCGEVTEDQIGQTVVLKGWVQKRRDLGGLIFIDLRDRTGIVQAVFNPDLSKEALETA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           +S+R+E+VL I G V++R   TIN N+ TG+IE+  + + +L+ A+  P  +  +  E  
Sbjct: 66  ESIRNEYVLDIKGTVVAREEATINPNLKTGKIEIQVETVSVLNEAKTPPFVISDQADEVS 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  + + +  R  +  + R  +    F++  TPILT S+PEGARD+L
Sbjct: 126 EDVRLKYRYLDLRRPAMFETMKMRHEVTRAFRHFLDDNGFLDIETPILTKSTPEGARDYL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 186 VPSRVHEGEFYALPQSPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQP-EFTQVDIEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI+   E ++  V ++   G  ++    R+ YD+A+  YG+DKPD R  + + N
Sbjct: 245 SFMSQEDIMTLAEEMMAKVMKDV-KGVELTLPLPRMTYDEAMNSYGSDKPDTRFEMKLVN 303

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +++    S+F+VFS   +V  G  V AI  KG   N  R   D +  +A + G  GLA++
Sbjct: 304 ISDTVKDSDFKVFSG--AVKNGGAVKAINVKGAAANYSRKDIDALGAFAANYGAKGLAWL 361

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                ++      GP+AK  +      ++ +L +++GD   F+A             R  
Sbjct: 362 -----KAEGTELKGPIAKFFDEAKQAELKEQLQVEEGDLLLFVADKTSVVHDALGALRLK 416

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +EL +I+ + F F W++D+P  E +EEE +   AH+PFTMP      L       +KA
Sbjct: 417 LGKELELIDESVFNFLWVVDWPLLEKDEEEGRFYAAHHPFTMPVRDDLELIETSPEDMKA 476

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+E+  G IR    ++  + FS +G SKE    +FG L  AF+ G+PPHGGI
Sbjct: 477 QAYDLVLNGYELGGGSIRIFEKDIQEKMFSLLGFSKEEAYEQFGFLLDAFEHGVPPHGGI 536

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VMLL G  N+R+   FP + +   +L  +P  VS  QL EL L I    K+
Sbjct: 537 ALGLDRLVMLLAGRSNLRDTIAFPKTASASCVLTDAPGHVSEAQLDELSLAIKTKVKQ 594


>gi|81300122|ref|YP_400330.1| aspartyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|97196966|sp|Q31NM6|SYD_SYNE7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|81169003|gb|ABB57343.1| aspartyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 599

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 357/596 (59%), Gaps = 25/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG+L    VG+ V L GWV R R HGG+IF+D+RD  G  Q+V++P+     +  A
Sbjct: 2   RTHYCGELRAEQVGTSVTLYGWVDRRRDHGGVIFVDLRDRTGTVQIVSDPERTPESYHQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFG--ERE 119
           + +R+E+V+ I G V  R AE++N  + TG++E+ A +IEIL +V  +LP  V    E  
Sbjct: 62  EGLRNEYVVKITGRVSGRPAESLNPKLPTGEVEIYADRIEILNAVRRQLPFQVSSADEET 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA--ENFIECSTPILTASSPEGA 177
             E +R +YR+LDLRRD +++N+  R +++ ++R R +   E FIE  TP+LT S+PEGA
Sbjct: 122 VREDLRLRYRYLDLRRDRMNRNLQLRHQVVKAIR-RFLEDEEQFIEIETPVLTKSTPEGA 180

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRVN G ++ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF QL
Sbjct: 181 RDYLVPSRVNPGEWFALPQSPQLFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQL 239

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF+ Q++I++  E ++  +F+    G  +   F R+ Y +A+ RYG+D+PD R  +
Sbjct: 240 DMEMSFLSQEEIIDLNERLIAHIFKTV-KGIELPRPFPRLTYAEAMDRYGSDRPDTRFGL 298

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN------EWARSQ 351
            + +V++      F+VFS  +      ++  IP    G +R    R+       + A   
Sbjct: 299 ELVDVSDVVADMGFKVFSGAVKSGGKVKILPIP---DGNDRISNVRIKPGGDIFKEATEA 355

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLAYI  R+ E+G +  +G +  +L+      I  R   Q G    F AG       
Sbjct: 356 GAAGLAYI--RVRENGEIDTIGAIKDNLSDEQKAEILRRTQAQPGTLLLFGAGSTDIVNK 413

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
                R  + +ELG+I+       W++DFP  EWN +EK+ +  H+PFT P    + L+ 
Sbjct: 414 SLDRVRQFLGKELGLIDPEALNLLWVVDFPMVEWNADEKRYEALHHPFTAPNP--QDLE- 470

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            DL + +A  YD+V NG EI  G +R +  ++  + F  +G+S E  + +FG L  AF  
Sbjct: 471 -DLTTARAQAYDIVLNGLEIGGGSLRIYQRDIQERVFETIGLSHEEAQAKFGFLLEAFDF 529

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           G PPHGGIA G+DR+VMLL G +++R+   FP +Q    LL  +P+ VS  QL+EL
Sbjct: 530 GTPPHGGIAYGLDRLVMLLTGEESIRDAIAFPKTQQARCLLTEAPADVSDRQLKEL 585


>gi|315926757|gb|EFV06131.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 615

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/598 (40%), Positives = 348/598 (58%), Gaps = 22/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+ +    EIA
Sbjct: 34  RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 93

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120
            + R+E+VL  +G +  R    +N  + TG+IE+   K   L++  E  +P F   +   
Sbjct: 94  SNARNEFVLITEGTIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 150

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+
Sbjct: 151 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 210

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 211 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 269

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF EQ D++   E  L+ +F+  + G  +   F ++ Y DA+  YG+DKPDLR  +   
Sbjct: 270 MSFCEQKDVIKVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 327

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+
Sbjct: 328 DVIDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 387

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R 
Sbjct: 388 IQVKKD-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 442

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A EL +I+ N  EF W++DFP +E N ++      H+PFTMP+   E+    DL  I 
Sbjct: 443 FLANELKLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 497

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGG
Sbjct: 498 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 557

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 558 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 615


>gi|15901929|ref|NP_346533.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111656894|ref|ZP_01407723.1| hypothetical protein SpneT_02001855 [Streptococcus pneumoniae
           TIGR4]
 gi|148992039|ref|ZP_01821813.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168489178|ref|ZP_02713377.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|24212415|sp|Q97ND6|SYD_STRPN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|14973626|gb|AAK76173.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|147929088|gb|EDK80099.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183572297|gb|EDT92825.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332071549|gb|EGI82042.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 587

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/596 (40%), Positives = 359/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E+++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITESLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI   G   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVRGVDFKVFSEAPAVK------AIVVTGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQ-EELTTALVLEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|284048846|ref|YP_003399185.1| aspartyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283953067|gb|ADB47870.1| aspartyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 598

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/594 (40%), Positives = 361/594 (60%), Gaps = 12/594 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M   R+H CGDL  +D G  V L GWV + R HGGIIF+D+RD +G+ QVV +P  D   
Sbjct: 1   MSMERSHHCGDLRKADAGKTVTLCGWVSKRRDHGGIIFIDLRDRHGLVQVVIDPAHDEKD 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F  A+ VRSE+VL + GLV  RSAET+N ++ TG++E+  + + +L+ ++  P  +    
Sbjct: 61  FHKAEGVRSEYVLQVRGLVRERSAETVNPHLPTGEVEVVVKDLNVLNPSKTPPFYIQDGI 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E++R +YR+LDLRR  + +N++ R ++  ++R  +  ++F+E  TP L  S+PEGAR
Sbjct: 121 DVDENVRLRYRYLDLRRPEMQQNLILRHQVTKAIRDFLDKQDFLEIETPDLIRSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G FYALPQ+PQ +KQLLM +G +RYFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DYLVPSRVNPGKFYALPQSPQLFKQLLMIAGMERYFQIARCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSFV+QDDI+   E ++  VF+E + G  V     R+ +D+A+ +YG+DKPDLR  + 
Sbjct: 240 MEMSFVDQDDIMALTEKLIAYVFKE-TLGVDVPVPMARMTWDEAMDKYGSDKPDLRFGMQ 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + N+      ++F+VF  I  +  G  V AI  KG     R   D + E+    G  GLA
Sbjct: 299 LVNMNGALEGTQFKVFKDI--IEKGGLVKAINVKGYNKIPRRELDGLVEFVGIYGAKGLA 356

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           +I   +++ G++    P+AK  +    + I      + GD   F+A    +  + A  A 
Sbjct: 357 WII--VNDDGSIK--SPIAKFFSDEEMQRILEAGKAEKGDVLLFVADRKPQVVAAALGAL 412

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  + + LG+I+ +   F W++ FP +E++EEE +    H+PFT P          D   
Sbjct: 413 RLEMGKRLGLIDPDKLCFTWVVKFPMFEYSEEEHRYVAMHHPFTAPCDEDVDKLLTDPGH 472

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + A  YD+V NG EI  G  R H  ++  + F  +G++ E  + +FG L +AF+ G PPH
Sbjct: 473 VYAKAYDMVLNGVEIGGGSERIHREDIQKKVFEAIGLTDEQAQEKFGFLLKAFEFGAPPH 532

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           GG+A G+DR+VML+    ++R+V  FP SQ+  DL+  +P+ V  +QLREL +R
Sbjct: 533 GGLAFGLDRLVMLMAKRPSIRDVIAFPKSQSAIDLMCQAPNVVDEKQLRELHIR 586


>gi|311031529|ref|ZP_07709619.1| aspartyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 590

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/592 (41%), Positives = 356/592 (60%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT++CG++  S +G  + L GWV + R  GG+IFLD+RD  G+ Q+V NPD  +   + A
Sbjct: 4   RTYNCGEVPQSSIGETIELKGWVQKRRDLGGLIFLDLRDRTGLVQIVFNPDVSAEALKTA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VR+E+VL I G V++R   T+N N+ TG IE+ A+ IE+L+ A+  P  +  + E  E
Sbjct: 64  ENVRNEYVLYIKGKVVARDEATVNPNLKTGAIEVQAEAIEVLNAAKTPPFVLDSKTEVNE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  +   +  R  +  S+R  +  + F+E  TPILT S+PEGARD+LV
Sbjct: 124 DIRLKYRYLDLRRPVMFDTLKMRHDVTRSIREFLNDQQFMEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHPGEFYALPQSPQIFKQLLMVSGVERYYQIARCFRDEDLRADRQP-EFTQVDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++I+  ME+++R V +  +    V   F RI Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLSQEEIIGMMEDMMRMVMKN-TKSVDVPETFPRITYQDAMNRYGSDKPDTRFEMELVDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VFS   +VN G +V AI  KG     +R   D + E+    G  GLA++ 
Sbjct: 302 SEQVADCGFKVFSA--AVNNGGQVKAINVKGAASKYSRKDIDALTEFVAVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++  G     GP+AK  N    +     LD  +GD   F+A             R  +
Sbjct: 359 -KVEAEGL---KGPIAKFFNEEEQQGFIQSLDATEGDLILFVADKKSVVADALGALRMKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F W+ D+P  E++EE  +   AH+PFTMP      L   +   ++A 
Sbjct: 415 GKELGLIDESKFNFLWVTDWPLLEYDEEAGRYFAAHHPFTMPVREDLPLLETNPSEVRAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  ++  + F+ +G SKE    +FG L  AF+ G PPHGGIA
Sbjct: 475 AYDLVLNGYELGGGSLRIYERDIQEKMFAVLGFSKEEATEQFGFLLEAFEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL G  N+R+   FP + +   +L  +PS V+  QL EL L + 
Sbjct: 535 LGLDRLVMLLAGRTNLRDTIAFPKTASASCILTEAPSPVAGGQLDELHLSLA 586


>gi|322378031|ref|ZP_08052518.1| aspartate--tRNA ligase [Streptococcus sp. M334]
 gi|321281013|gb|EFX58026.1| aspartate--tRNA ligase [Streptococcus sp. M334]
          Length = 587

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/596 (40%), Positives = 358/596 (60%), Gaps = 23/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVALPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +T      +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTAVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTSIQAE-LTTALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S +   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAKEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 526 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|51244422|ref|YP_064306.1| aspartyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|62287551|sp|Q6AQS4|SYD_DESPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|50875459|emb|CAG35299.1| probable aspartyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 607

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/591 (41%), Positives = 350/591 (59%), Gaps = 15/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH C  L   D+G  V L GWV R R HGG+IF+D+RD  GITQVV NP+        A
Sbjct: 22  RTHFCDALRKEDIGKQVILMGWVLRRRDHGGVIFIDLRDRRGITQVVFNPEINPEVHAKA 81

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+RSEWVL I G V +R  +  N  + TG IE+   ++ IL+ +E  P P+  E E  E
Sbjct: 82  HSLRSEWVLAIKGTVSARPGDMANTKLGTGDIEILVDELVILNTSETPPFPLDEETEVSE 141

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YR+LDLRR  + +N++ R + + ++R  +    F++  TP+LT S+PEGARD+LV
Sbjct: 142 NLRLQYRYLDLRRPAMARNLLLRHKAVQAIRNYLNDNEFLDIETPMLTRSTPEGARDYLV 201

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +G DRY+QI  CFRDED R+DR P EF Q+DME+S
Sbjct: 202 PSRVSAGKFYALPQSPQLFKQLLMIAGMDRYYQIVKCFRDEDLRADRQP-EFTQIDMELS 260

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ I+   E +++ +F+E  + + ++  F  I Y D++ R+G D+PD+R  + + N+
Sbjct: 261 FVDEEQIIEVTEGMIQTLFKETLDLD-LTPPFAHITYADSMERFGCDRPDMRFGMELVNL 319

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE      F+VF  I     G  V AI AK     +R   D + E+A   G  GLA++  
Sbjct: 320 TEIAKSCSFKVFRAI--AEEGGTVRAINAKACAHFSRKDLDGLTEYAALFGAKGLAWVKM 377

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D         P+AK  +     +I   LD Q+GD  FF A           + R  +A
Sbjct: 378 KADGEWQ----SPIAKFFSEEERASIAEALDAQEGDLLFFGADSEKVVFQVLGELRLEMA 433

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L +++   F F W+ DFP  E++E+E +    H+PFT P+   E L   +    KA  
Sbjct: 434 RRLDLLDKKEFNFVWVTDFPLMEYDEKEDRYQSIHHPFTAPRE--EDLDLLETAPDKALS 491

Query: 482 --YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H  +V  +  + +GI KE  + +FG L RA + G PPHGG+
Sbjct: 492 RAYDLVLNGTEIGGGSIRIHQRDVQARVLTALGIDKEEADEKFGFLLRALELGAPPHGGL 551

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           A G+DR++ML+ G+ ++R V  FP +Q    LL  +P+TV+ +QL EL LR
Sbjct: 552 AFGLDRLMMLITGSDSIRNVIAFPKTQKAACLLTEAPATVARKQLTELYLR 602


>gi|242310434|ref|ZP_04809589.1| aspartyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239522832|gb|EEQ62698.1| aspartyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 583

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/596 (40%), Positives = 346/596 (58%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H C DL   D+G  V+L GW +  R HGGI+F+D+RD  G+ Q+V +P       +IA
Sbjct: 2   RSHYCADLDEKDIGREVKLCGWCNTYRDHGGIVFIDLRDRSGLVQLVFDPKDFEQSHKIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL   G V  R     N  + TG+IE+   ++ I + +   P+ V G+    E
Sbjct: 62  SEVRDEYVLIAKGKVRKRGEGLENPKLKTGKIEVLVSELSIENKSLTPPIAV-GDESVGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   L +  + R+++  ++R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 DVRLKYRYLDLRNPRLQEIFITRSKVAQAVRNTLSNLGFLEIETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R DR P EF Q+D+EMS
Sbjct: 181 PSRVHHGEFYALPQSPQLFKQLLMVSGFDKYFQIAKCFRDEDLRLDRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQ D++   E+VL+ +F   + G  V   F    Y + +  YG+DKPDLR  + +  V
Sbjct: 240 FVEQKDVMGVAESVLKSIFG--ACGIEVQTPFPHYTYKEVMETYGSDKPDLRYDLPLVEV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++ FV S   +F+ I   +      A+  KGG    +R       E+ R  G  GLAY+ 
Sbjct: 298 SDLFVDSSNEIFASIAKDSKKNRFKALCVKGGDSFFSRKTLGEAEEFVRKFGAKGLAYLQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + +E       GP+ K ++  N + +  R+    GD  FF AG       +    R  I
Sbjct: 358 IKENEI-----KGPLVKFISEQNLKTLLERVGASVGDIVFFGAGAKKIVWDYMGRLRQKI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ++G+IN + ++F W++DFP +E N ++  I   H+PFTMP+     L+  D+  I + 
Sbjct: 413 ANDMGMINESVYKFLWVVDFPMFERN-DDGSISALHHPFTMPR----DLEVEDIEEINSV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NGFEI  G IR H  E+  + F  +GI++E  +++F  L  A Q G PPHGGIA
Sbjct: 468 AYDVVLNGFEIGGGSIRIHKQEIQSKVFELLGITQEEAKDKFSFLLEALQFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DRI+MLL  A ++R+V  FP +Q     L  +PS    EQLREL +R+ E  K
Sbjct: 528 FGLDRIIMLLCNAHSIRDVIAFPKTQKATCPLTDAPSPAGEEQLRELHIRVRETKK 583


>gi|303238650|ref|ZP_07325183.1| aspartyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302593769|gb|EFL63484.1| aspartyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 594

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/591 (40%), Positives = 356/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L  S VG  V + GW H+ R  GG+IF+D+RD  GI QVV N +     F  A
Sbjct: 10  RTHRCGELDASHVGQKVTVMGWAHKRRDLGGVIFVDMRDRTGILQVVFNNEISGEIFGKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL + G V+ RS ET+N+ I TG+IE+ A ++ ILS +E  P+ +  + +  E
Sbjct: 70  EAIRSEYVLAVVGEVVRRSPETVNSKIPTGEIEVIANELRILSSSETPPVYIEEDTDVNE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R K+R+LDLRR  + +N++ R ++    R       F+E  TP+LT S+PEGARD+LV
Sbjct: 130 TLRLKHRYLDLRRPDMQRNLILRHKVAKIARDYYDENGFLEIETPMLTKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G F+ALPQ+PQ +KQLLM SGFDRY QI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRVHPGKFFALPQSPQLFKQLLMVSGFDRYIQIVKCFRDEDLRADRQP-EFTQIDLEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV  +D+L   E  ++ VF+E + G  +   FLR+ Y +A+ R+G+DKPD+R  + + N+
Sbjct: 249 FVNVEDVLQINEGFIKKVFDE-ALGVKLETPFLRMTYQEAMDRFGSDKPDIRFGLELINI 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++   +  F+VFS   +V  G  V AI AKG G   +R   D + E+ +     G+A+I 
Sbjct: 308 SDMVENCGFKVFSD--AVKNGGSVRAINAKGCGRIFSRREIDSLVEFVKIYKAKGMAWIV 365

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              +E  +      + K  +    +AI  R+  + GD   FIA             R  I
Sbjct: 366 VEENELKSA-----ITKFFSEDEVKAILERVKAEPGDLICFIADKNEVVYDSLGQLRLEI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+   +I+   F+F W+ +FP  E++EEEK+    H+PFT P          D   ++A 
Sbjct: 421 ARRTNLIDEKEFKFLWVTEFPLLEYDEEEKRWVAKHHPFTSPMDEDLQYLDTDPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H   +  + FS +GI++E   +RFG L  AF+ G PPHGG+A
Sbjct: 481 AYDIVLNGTEIGGGSIRIHDQFLQSKMFSLIGINEEQAADRFGFLLEAFKYGTPPHGGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VM++ G  ++R+V  FP  QN  DL+  +P  V  +Q++EL +++
Sbjct: 541 FGLDRLVMIMAGKSSIRDVIAFPKVQNASDLMSNAPDIVEDKQIKELHIKL 591


>gi|315124155|ref|YP_004066159.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315017877|gb|ADT65970.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 583

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/598 (40%), Positives = 348/598 (58%), Gaps = 22/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+ +    EIA
Sbjct: 2   RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120
            + R+E+VL  +G +  R    +N  + TG+IE+   K   L++  E  +P F   +   
Sbjct: 62  SNARNEFVLITEGTIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF EQ D++   E  L+ +F+  + G  +   F ++ Y DA+  YG+DKPDLR  +   
Sbjct: 238 MSFCEQKDVIKVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+
Sbjct: 296 DVIDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAEGLAF 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R 
Sbjct: 356 IQVKKD-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A EL +I+ N  EF W++DFP +E N ++      H+PFTMP+   E+    DL  I 
Sbjct: 411 FLANELKLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGG
Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 526 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|157693160|ref|YP_001487622.1| aspartyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157681918|gb|ABV63062.1| aspartate--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 594

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/598 (40%), Positives = 350/598 (58%), Gaps = 14/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG++    +G  V L GWV + R  GG+IF+D+RD  GI Q V NPD      E A
Sbjct: 6   RTFYCGEVTEDQIGQTVVLKGWVQKRRDLGGLIFIDLRDRTGIVQAVFNPDLSKEALETA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           +S+R+E+VL I G V++R   TIN N+ TG+IE+  + + +L+ A+  P  +  +  E  
Sbjct: 66  ESIRNEYVLDIKGTVVAREEATINPNLKTGKIEIQVETVSVLNEAKTPPFVISDQADEVS 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  + + +  R  +  + R  +    F++  TPILT S+PEGARD+L
Sbjct: 126 EDVRLKYRYLDLRRPAMFETMKMRHEVTRAFRHFLDDNGFLDIETPILTKSTPEGARDYL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 186 VPSRVHEGEFYALPQSPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQP-EFTQVDIEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI+   E ++  V ++   G  ++    R+ YD+A+  YG+DKPD R  + + N
Sbjct: 245 SFMSQEDIMTLAEEMMAKVMKDV-KGVDLTLPLPRMTYDEAMNSYGSDKPDTRFEMKLVN 303

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +++    S+F+VFS   +V  G  V AI  KG   N  R   D +  +A + G  GLA  
Sbjct: 304 ISDTVKDSDFKVFSG--AVKNGGAVKAINVKGAAANYSRKDIDALGAFAANYGAKGLA-- 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            W   E   +   GP+AK  +      ++ +L +++GD   F+A             R  
Sbjct: 360 -WLKAEGSELK--GPIAKFFDEAKQGELKEKLQVEEGDLLLFVADKTSVVHDALGALRLK 416

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +EL +I+ + F F W++D+P  E +EEE +   AH+PFTMP      L       +KA
Sbjct: 417 LGKELELIDESRFNFLWVVDWPLLEKDEEEGRFYAAHHPFTMPVRDDLELIETSPEDMKA 476

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+E+  G IR    ++  + FS +G SKE    +FG L  AF+ G+PPHGGI
Sbjct: 477 QAYDLVLNGYELGGGSIRIFEKDIQEKMFSLLGFSKEEAYEQFGFLLDAFEHGVPPHGGI 536

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VMLL G  N+R+   FP + +   +L  +P  VS  QL EL L I    K+
Sbjct: 537 ALGLDRLVMLLAGRSNLRDTIAFPKTASASCVLTDAPGHVSEAQLDELSLAIKTKVKQ 594


>gi|218562290|ref|YP_002344069.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|24212426|sp|Q9PHM7|SYD_CAMJE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|112359996|emb|CAL34785.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
          Length = 583

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/598 (40%), Positives = 348/598 (58%), Gaps = 22/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+ +    EIA
Sbjct: 2   RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120
            + R+E+VL  +G +  R    +N  + TG+IE+   K   L++  E  +P F   +   
Sbjct: 62  SNARNEFVLITEGTIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF EQ D++   E  L+ +F+  + G  +   F ++ Y DA+  YG+DKPDLR  +   
Sbjct: 238 MSFCEQKDVIKVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+
Sbjct: 296 DVIDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R 
Sbjct: 356 IQVKKD-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A EL +I+ N  EF W++DFP +E N ++      H+PFTMP+   E+    DL  I 
Sbjct: 411 FLANELKLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDET----DLEEIS 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGG
Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 526 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|149006915|ref|ZP_01830596.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|307128374|ref|YP_003880405.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|147761516|gb|EDK68481.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|306485436|gb|ADM92305.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 587

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/597 (40%), Positives = 362/597 (60%), Gaps = 25/597 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  K    N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKEAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 -KVVDGELN----GPVAKFLTGIQ-EELTTALALEDKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSI 477
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ   +  L+G DL  +
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETVHELEG-DLAKV 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHG
Sbjct: 465 RAIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 525 GLAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|239904667|ref|YP_002951405.1| aspartyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239794530|dbj|BAH73519.1| aspartyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 592

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/594 (41%), Positives = 348/594 (58%), Gaps = 24/594 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H CG L  SDVGS V L GW    R HGG+IF+D+RD  G+TQVV  P+++  E+ ++
Sbjct: 6   RSHDCGALTASDVGSEVCLMGWAQFRRDHGGLIFIDLRDRGGLTQVVFCPEASQAELERA 65

Query: 65  --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+E+VL + G V +R     N N+ TG+IE+   + ++L+ A   P P+    +  E
Sbjct: 66  HVLRTEYVLAVKGRVRARPEGMANPNMPTGEIEVEVHEFKLLNTAATPPFPIEDRIDASE 125

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  L  N + R + + S+R  +    F+E  TP+LT S+PEGARDFLV
Sbjct: 126 MLRLKYRYLDLRRPKLAANFILRNKAVQSIRRYLDELGFLEVETPVLTKSTPEGARDFLV 185

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN GSFYALPQ+PQ +KQLLM +GFDRY+Q+  CFRDED R+DR P EF Q+D+EMS
Sbjct: 186 PSRVNNGSFYALPQSPQLFKQLLMMAGFDRYYQVVKCFRDEDLRADRQP-EFTQVDIEMS 244

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ ++   E +++ +F E + G  +   F R+ + +AIR YG DKPD+R  + + +V
Sbjct: 245 FVDEEQVMGMAETMVKTMFRE-AAGVVLPEVFPRMPFAEAIRDYGLDKPDIRFGLKLVDV 303

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T    +S F+VF+K   V        I   GG   +R   D   E+ +  G  GLA+I  
Sbjct: 304 TSIVKNSGFQVFAKAELVK------GIRVPGGAALSRKEIDDFTEFVKIYGAKGLAWIKI 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE        P AK L+    + +     ++ GD  FF AG      +     R  + 
Sbjct: 358 KEDE-----WQSPFAKFLSDEEKKGLTDAFGLEVGDIVFFQAGASDMVNNALGYLRLQLG 412

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMESLKGNDLLSI 477
           +   +I    F   WI DFP  E++ E K+    H+PFT PQ    G +ES  G  L   
Sbjct: 413 ERFEMIPEGSFAPVWITDFPLLEYDPEAKRWAARHHPFTSPQPGQLGTLESAPGEAL--- 469

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YDLV NG EI  G IR H  E     F+ +GI  +  E++FG L RA + G PPHG
Sbjct: 470 -ARAYDLVLNGSEIGGGSIRIHDRETQRAMFAVLGIDAQEAEDKFGFLLRALEYGAPPHG 528

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DR++M+L GAK++R+V  FP +Q    L+  +P  VS  QLRELG+++
Sbjct: 529 GIAFGLDRLIMILAGAKSIRDVIAFPKTQKALCLMTEAPGEVSTNQLRELGIKL 582


>gi|88597107|ref|ZP_01100343.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|88190796|gb|EAQ94769.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
          Length = 583

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/598 (40%), Positives = 348/598 (58%), Gaps = 22/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+ +    EIA
Sbjct: 2   RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120
            + R+E+VL  +G +  R    +N  + TG+IE+   K   L++  E  +P F   +   
Sbjct: 62  SNARNEFVLITEGTIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFAIADESV 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF EQ D++   E  L+ +F+  + G  +   F ++ Y DA+  YG+DKPDLR  +   
Sbjct: 238 MSFCEQKDVIKVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+
Sbjct: 296 DVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R 
Sbjct: 356 IQVKKD-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRI 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A EL +I+ N  EF W++DFP +E N ++      H+PFTMP+    ++   DL  I 
Sbjct: 411 FLANELKLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPK----NIDETDLEEIS 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGG
Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 526 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|306826288|ref|ZP_07459622.1| aspartate--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431564|gb|EFM34546.1| aspartate--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 587

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/597 (40%), Positives = 362/597 (60%), Gaps = 25/597 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + KN+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLKNLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKGIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  + +   L +++ D   F+A D L+  +    A R 
Sbjct: 353 KV-VDGELN----GPVAKFLTGIQAD-LTTALGLEEKDLVLFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSI 477
            IA+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ   +  L+G DL  +
Sbjct: 406 RIAKELDLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETVHELEG-DLAKV 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHG
Sbjct: 465 RAIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 525 GLAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|257055552|ref|YP_003133384.1| aspartyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256585424|gb|ACU96557.1| aspartyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 590

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/597 (42%), Positives = 344/597 (57%), Gaps = 31/597 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L V  VG  V L+GWV R R HGG+IF+D+RD  G+ Q+V   +    E A +
Sbjct: 3   RTHDAGTLRVEHVGQTVTLTGWVARRRDHGGVIFIDLRDASGVAQIVFR-EGEMAERAHA 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ L + G V  R     N  I TG IE+   ++E+LS +  LP P+    E  E  
Sbjct: 62  LRSEYCLKVTGEVARRPEGNENPEIPTGDIEVFVTELEVLSESAALPFPIDERLEVGEET 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR+   + +  R+ +    R  +    FIE  TP +T S+PEGARDFLVP+
Sbjct: 122 RLRYRYLDLRREGPARIMRLRSEVNRVAREVLHRHGFIEVETPTMTRSTPEGARDFLVPA 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 182 RLKPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E+VL  +++    G  VS  F R+ Y +A+ +YGTDKPDLR  + +  +T+
Sbjct: 241 EQDDVMALAEDVLSALWK--LAGVEVSTPFRRMSYAEAMSKYGTDKPDLRFGLELVELTD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  + FRVF           V A+   GG    R   D   EWAR +G  GLAY+   +
Sbjct: 299 FFADTPFRVFQAPY-------VGAVVMPGGADQPRRTLDAWQEWARQRGHKGLAYVL--V 349

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPVAK+L+      +      + GD  FF AG P         AR  IA  
Sbjct: 350 GEDGTLG--GPVAKNLSEHERANLVEAAGAKPGDCIFFAAGKPKDARQLLGMARVEIAHR 407

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQ----GGMESLKGN 472
           LG+I+ N + F W++DFP +E  +E   ++         H+ FT P        E   GN
Sbjct: 408 LGMIDENAWSFVWVVDFPMFEAADESDDVNVGGGKWTALHHAFTSPAPEWIDKFEQDPGN 467

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            L    A  YD+VCNG EI  G IR H ++V  + F  +G+S+E  +++FG L  AFQ G
Sbjct: 468 AL----AQAYDIVCNGHEIGGGSIRIHRADVQKRVFEVMGLSEEEAQDKFGFLLDAFQYG 523

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            PPHGG+A G DRIVMLL GA+++REV  FP +    D L G+P+ ++ +Q +E G+
Sbjct: 524 PPPHGGVAFGWDRIVMLLAGAESLREVIAFPKTGGGYDPLTGAPAPITAQQRKEAGV 580


>gi|110004665|emb|CAK99000.1| probable aspartyl-trna synthetase protein [Spiroplasma citri]
          Length = 577

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 232/587 (39%), Positives = 352/587 (59%), Gaps = 13/587 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH CG+L + +V S V LSGWV + R  GGIIFLD+RD  GI Q+V  PD   + +  +
Sbjct: 3   RTHPCGELTLKNVKSKVVLSGWVAKNRRLGGIIFLDLRDRTGIIQIVVQPDHPQYAMINT 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+V+ ++G+V+ R  +  N  + TG+IE++A++I ILS A+  PL +    +  E +
Sbjct: 63  IRNEFVISVEGVVIERKNK--NLELPTGEIEIAAEQITILSKAQTPPLIINDITDALEDV 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  + + I+ R +++ ++R       FI+  TPIL  S+PEGARDFLVPS
Sbjct: 121 RMKYRYLDLRRPIMQQKIMLRNQLVQTIRQFCQVHQFIDIETPILNKSTPEGARDFLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+N   FYALPQ+PQ +KQLLM +GFD+YFQIA CFRDED RSDR P EF QLD+EMSFV
Sbjct: 181 RLNPHHFYALPQSPQLFKQLLMLAGFDKYFQIAKCFRDEDLRSDRQP-EFTQLDLEMSFV 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +DDI++ +E +   + ++      +   FL + YD+AI +YGTDKPD R  + + +  +
Sbjct: 240 TRDDIMDFVETLFHTIMQDVMKVK-IKTPFLWMDYDEAIEKYGTDKPDTRYDLQLFDAKD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  +EF +F+  L      +   IP      ++   + +   A+     GLA   W   
Sbjct: 299 IFAKTEFSIFATALKKELSLKGIFIPQL---VSKKQVEELTRIAQQNKAKGLA---WVKQ 352

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E  N    GP+AK L+  N +   +++  +   + FF++      C      R  +A+  
Sbjct: 353 EKNNWE--GPLAKALS-DNEKTKLLQVCNKQAGTFFFVSDQKAITCQALGAVRVALAKMF 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            +I  N + F WI+++P YEW++E  + + AH+PFT P          ++ + +A  YDL
Sbjct: 410 DLIPLNEYHFLWIVNWPLYEWSDENNRYEAAHHPFTAPTSEFIDNFEQNMATARADAYDL 469

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG+EI  G IR H +EV  + F ++ +S + + N+FG    AF  G+PPHGGIA G+D
Sbjct: 470 VLNGYEIGGGSIRIHQNEVQTRMFKSLQLSNQEIANKFGWFLNAFNYGVPPHGGIAFGLD 529

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           R+ M+L  ++++R+V  FP +    D +  SPS V  +QL ELG+++
Sbjct: 530 RLAMILTNSESIRDVIAFPKNATGIDPMTASPSPVDGKQLDELGIKL 576


>gi|153951485|ref|YP_001398402.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166225335|sp|A7H4H2|SYD_CAMJD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|152938931|gb|ABS43672.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 583

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/598 (40%), Positives = 351/598 (58%), Gaps = 22/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+ +    EIA
Sbjct: 2   RSHYNIDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120
            + R+E+VL  +G +  R    +N  + TG+IE+   K   L++  E  +P F   +   
Sbjct: 62  SNARNEFVLIAEGTIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESIVPPFAIADESV 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF E+ D++N  E  L+ +F+  + G  +   F ++ Y DA+  YG+DKPDLR  +   
Sbjct: 238 MSFCEKKDVINVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFI 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+
Sbjct: 296 DVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAEGLAF 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  ++ E G     GP+ K  +  +   +  R  ++ GD  FF AG       +    R 
Sbjct: 356 I--QVKEDG---LKGPLCKFFSEEDLNELSKRCKLEVGDVVFFGAGAKKTVLDYMGRFRI 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A EL +I+ N  EF W++DFP +E N ++      H+PFTMP+    ++  NDL  I 
Sbjct: 411 FLANELNLIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPK----NIDENDLEEIS 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGG
Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 526 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTEAPSPASNEAMRELGIKLRENIK 583


>gi|270291765|ref|ZP_06197981.1| aspartate--tRNA ligase [Streptococcus sp. M143]
 gi|270279850|gb|EFA25691.1| aspartate--tRNA ligase [Streptococcus sp. M143]
          Length = 585

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/601 (40%), Positives = 362/601 (60%), Gaps = 25/601 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLATGAVELNVTALTVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+  +V       AI  KG   N  R   D+M E A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFSEAPAVK------AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D   N    GPVAK L  +  +     L ++D D   F+A D L+  +    A R 
Sbjct: 353 -KVVDGELN----GPVAKFLTGIQADLTNT-LGLEDKDLILFVA-DTLEVANATLGALRG 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSI 477
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ      L+GN L  +
Sbjct: 406 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGN-LAKV 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHG
Sbjct: 465 RAIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL +++  +  K
Sbjct: 525 GLAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELEIQLKPSALK 584

Query: 598 I 598
           +
Sbjct: 585 V 585


>gi|171778545|ref|ZP_02919672.1| hypothetical protein STRINF_00524 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282768|gb|EDT48192.1| hypothetical protein STRINF_00524 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 582

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/597 (40%), Positives = 355/597 (59%), Gaps = 25/597 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           RT   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    ++   
Sbjct: 3   RTMYAGRVRSEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSSDVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+R+E+V+ + G+V  R  E  N N+ TG +EL    + +L+ A+  P  +  + E  
Sbjct: 63  AESLRNEFVIEVTGVVAQREQE--NTNLPTGAVELKVSALIVLNTAKTTPFEIKDDVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  +  N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDNRLRYRYLDLRRPKMLNNFKLRAKVTHSIRNYLDGLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+DME 
Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDMET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   DI +  E ++  V ++ + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSDKDIQDITEGMIAKVMKD-TKGIDVTLPFPRMSYDDAMNNYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+   V       AI  KG     +R   D++ E+A+  G  GLA++
Sbjct: 299 LTEVVKDVDFKVFSQAPVVK------AIVVKGNADKYSRKNIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            +  D S N    GPVAK L  +  + +   L ++D D   F+A D L+  +    A R 
Sbjct: 353 KF-TDGSLN----GPVAKFLTSIE-DKLTASLQLEDNDLVLFVA-DTLEVANNTLGALRT 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSI 477
            IA+EL +++ + F F W++D+P +EW+EEE +   AH+PFT+P +     L+G DL  +
Sbjct: 406 RIAKELDMVDNSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEESAHELEG-DLAKV 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  E+  + F  +G + E   ++FG L  A   G PPHG
Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQRELQERMFKALGFTAEEAADQFGFLLEAMNYGFPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L    N
Sbjct: 525 GLAIGLDRFVMLLAGEDNIREVIAFPKNNKATDPMTQAPSLVSDKQLEELALATKTN 581


>gi|86608637|ref|YP_477399.1| aspartyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|97196961|sp|Q2JMA8|SYD_SYNJB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|86557179|gb|ABD02136.1| aspartyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 601

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 247/609 (40%), Positives = 363/609 (59%), Gaps = 27/609 (4%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-- 57
           +HR  RT  CG++  + +G  V L GW+ R R HGG+IFLD+RD  GI Q+VA+P     
Sbjct: 5   IHRPARTLYCGEVRPAHIGQTVTLYGWIDRRRDHGGVIFLDLRDRSGIVQLVADPQKTPQ 64

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG 116
            + +A  VR+E+V+ + G V  R  ++ N  + TG++E+ A+++E+LS V ++LP  V G
Sbjct: 65  SYPLAGEVRNEYVVRVTGTVQQRPPDSFNPRLATGEVEIYAEQLEVLSPVGKQLPFSVSG 124

Query: 117 EREYPES--IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA--ENFIECSTPILTAS 172
           E        IR +YR+LDLRR+ + +N+  R R+I ++R R +   E F+E  TPILT S
Sbjct: 125 EEAEEVREEIRLRYRYLDLRRERMSRNLQLRHRVIQAIR-RFLEDEEGFVEVETPILTRS 183

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           +PEGARD+LVPSRVN G ++ALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P 
Sbjct: 184 TPEGARDYLVPSRVNPGEWFALPQSPQLFKQLLMVAGVDRYYQIARCFRDEDLRADRQP- 242

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF QLDMEMSF++Q+ IL   E ++  +F+    G  +   F R+ Y +A+ RYG+DKPD
Sbjct: 243 EFTQLDMEMSFMDQEGILELNERLICHIFKTV-KGIHLPRPFPRLTYAEAMARYGSDKPD 301

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN------E 346
            R  + + +V+E F  S F+VF+K+L+     ++  +P   GG  +    R+       +
Sbjct: 302 TRFGMELVDVSEVFQGSRFKVFAKVLAEGGLIKILPVP---GGDEKISNTRIKPGGDLFK 358

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406
                G  GLA+I  R D   ++  +G + + L+    + +      + GD   F AG  
Sbjct: 359 LVTQYGAGGLAFIRVRPD---SLDTIGALKESLSPEQEKRLLDLTQAKPGDLLLFGAGPA 415

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
                     R H+ QELG+I  N     WI DFP +E+N EE +++  H+PFT P    
Sbjct: 416 AVVNESLGRLRLHLGQELGLIPENALNLLWITDFPMFEFNAEENRLEALHHPFTAPHPDD 475

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
            +    DL + +A  YDLV NG E+  G +R +  E+  Q F  +G++ E   ++FG L 
Sbjct: 476 LA----DLKTARAQAYDLVWNGVEVGGGSLRIYQREIQEQVFQAIGLTPEQARDKFGFLL 531

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            AF+ G PPHGGIA G+DR+VMLL G  ++R+V  FP +Q    LL G+PS+V  +QL+E
Sbjct: 532 EAFEYGTPPHGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQARCLLTGAPSSVEAKQLKE 591

Query: 587 LGLRIVENP 595
           L +     P
Sbjct: 592 LHVASTYQP 600


>gi|320547658|ref|ZP_08041943.1| aspartate--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447733|gb|EFW88491.1| aspartate--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 582

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/597 (40%), Positives = 354/597 (59%), Gaps = 25/597 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           RT   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    ++   
Sbjct: 3   RTMYAGRVRSEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSSDVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +R+E+V+ + G V  R  E  N N+ TG++EL    + IL+ A+  P  +  + E  
Sbjct: 63  AEKLRNEFVIEVTGEVAQR--EQANKNLPTGEVELKVTALTILNTAKTTPFEIKDDVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  +  N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDNRLRYRYLDLRRPKMLNNFKLRAKVTHSIRNYLDGLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+DME 
Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDMET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   DI +  E ++  V ++ + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSDKDIQDITEGMIAKVMKD-TKGIDVTLPFPRMSYDDAMNNYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+   V       AI  KG     +R   D++ E+A+  G  GLA++
Sbjct: 299 LTELVKDVDFKVFSQAPVVK------AIVVKGNADKYSRKNIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            +  D S N    GPVAK L  +  E +   L ++D D   F+A D  +  +    A R 
Sbjct: 353 KF-TDGSLN----GPVAKFLTTIEDE-LTASLQLEDNDLVLFVA-DTFEVANNTLGALRT 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSI 477
            IA+EL +++ + F F W++D+P +EW+EEE +   AH+PFT+P +     L+G DL  +
Sbjct: 406 RIAKELDMVDNSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEESAHELEG-DLAKV 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  E+  + F  +G + E   ++FG L  A   G PPHG
Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQRELQERMFKALGFTAEEANDQFGFLLEAMNYGFPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L I  N
Sbjct: 525 GLAIGLDRFVMLLAGEDNIREVIAFPKNNKATDPMTQAPSLVSDKQLDELALAIGNN 581


>gi|220932051|ref|YP_002508959.1| Aspartyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254781736|sp|B8CXE5|SYD_HALOH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219993361|gb|ACL69964.1| Aspartyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 590

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/590 (40%), Positives = 356/590 (60%), Gaps = 13/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RTH  G +    +G  V + GWV + R HGG+IF+D+RD  GI QVV NPD+    F+ A
Sbjct: 10  RTHYAGKISTQQIGKKVTVMGWVQKRRDHGGVIFIDLRDRSGIVQVVFNPDNNERAFKKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+V+ ++G V  R    IN +I TG+IE+   ++ IL  +E  P  +  +    E
Sbjct: 70  TELRSEYVIAVEGEVEKRPEGNINPDIPTGEIEIRGNRLRILDESETPPFEIDDDINVGE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + KN+  R R++ + R  +    F E  TPILT S+PEGARD+LV
Sbjct: 130 DLRLKYRYLDLRRPRMKKNLELRHRVMKTTRDYLDDNGFWEVETPILTRSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQ+PQ +KQLLM  G +RYFQIA CFRDED R++R P EF Q+D+EMS
Sbjct: 190 PSRIHPGHFYALPQSPQLFKQLLMVGGVERYFQIARCFRDEDLRANRQP-EFTQIDIEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++D+ + +  +++ +F        +      + Y +AI R+G+DKPDLR  + + +V
Sbjct: 249 FIDKEDVFSLVNGLMKRLFALVD--IEIPEKIPVMPYQEAIDRFGSDKPDLRFGMELKDV 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++    SEFRVFS +  V  G +V  I  KGG    R+  D   ++ +  G  GLA+I  
Sbjct: 307 SDVVKDSEFRVFSGV--VKDGGQVKGINFKGGAISPRSKIDGYTDYVKIFGAKGLAWI-- 362

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            L E+G  +   P+AK L+    E I+ ++  Q GD   F+A  P        + R  IA
Sbjct: 363 ALKENGLKS---PIAKFLSEKELEGIKEKMGAQTGDLLLFVADKPSIVADALGNLRLKIA 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +E G+I    ++F W++DFP  E++E+E +    H+PFT P      L  ++   I++  
Sbjct: 420 REEGLIPDGVYKFVWVVDFPLMEYDEDEGRYVAKHHPFTAPLDEDIPLLDSNPEKIRSKA 479

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD V NG E+  G IR +  ++ ++ F+ + IS+E   ++FG L  AF  G PPHGGIA 
Sbjct: 480 YDFVLNGEELGGGSIRINNKDLQMKVFNALNISEEKASDKFGFLLEAFNYGAPPHGGIAF 539

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++M+L G++++R+V  FP +Q     L  +PSTV+ +QLREL ++I
Sbjct: 540 GLDRLLMVLSGSESMRDVIAFPKTQKASSPLTEAPSTVAEKQLRELHIKI 589


>gi|323464279|gb|ADX76432.1| aspartyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 588

 Score =  439 bits (1128), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/597 (40%), Positives = 349/597 (58%), Gaps = 24/597 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +    +   V L GWVH  R  GG+IF+D+RD  G  QVV NP       E+A
Sbjct: 4   RTTYCGSVTEELLEQEVTLKGWVHNRRDLGGLIFVDVRDREGYVQVVFNPAFSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           + +RSE+V+ I G V  R  ETIN  I TGQ+E+ A+ IEI++ +E  P  +  E     
Sbjct: 64  ERIRSEYVVEITGTVTKRDDETINPKIKTGQVEVQAKSIEIINQSETPPFSINEENLNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR+ L +    R +I  S+R  +  + F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRREKLAQTFKMRHQITRSIRQFLDGDGFYDVETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D++   E +++ V  +   G  +++ F R+ Y +A+ RYGTDKPD R  + + +
Sbjct: 243 SFVEQEDVMQLGEAMVKNVLADV-KGIEMTDAFPRMTYTEAMSRYGTDKPDTRFGMELLD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           V+E     +F+VF    +V  G +V A+  +    +  R   D + E+    G  GLA++
Sbjct: 302 VSELGQIMDFKVFKG--AVESGGQVKALVVENAAADYTRKDIDGLTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+A+     +   ++     + GD   F+A             RN 
Sbjct: 360 --KVVEDGL---NGPIARFFEDAHVTKLQALTGAKAGDLVLFVADSKDVVAQSLGALRNK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI-- 477
           + +E G+I+   + F W+ D+P  E++EE ++   AH+PFT P+     ++  DLL    
Sbjct: 415 LGKERGLIDPEQYNFLWVTDWPLLEYDEEARRYVAAHHPFTSPK-----VEDIDLLETAP 469

Query: 478 ---KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
              +A  YDLV NGFE+  G IR H  E+  + F  +G S E  + +FG L  AF+ G P
Sbjct: 470 EQAQAQAYDLVLNGFELGGGSIRIHDGELQQRMFKALGFSDEAAQEQFGFLLDAFKYGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PHGGIA G+DR VM+L G  N+R+   FP + +  DL+  +PS VS  QL EL LRI
Sbjct: 530 PHGGIALGLDRFVMILSGRTNLRDTIAFPKTASATDLMTDAPSPVSERQLDELSLRI 586


>gi|291485164|dbj|BAI86239.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 592

 Score =  439 bits (1128), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/598 (40%), Positives = 356/598 (59%), Gaps = 16/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ CGD+    +G  V L GWV + R  GG+IF+D+RD  GI QVV NPD +     +A
Sbjct: 4   RTYYCGDITEKAIGESVTLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKEALAVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP 121
           + +R+E+VL + G V++R   T+N N+ TG IE+ A  + +LS A+  P  +  +  E  
Sbjct: 64  EGIRNEYVLDVQGKVVAREEGTVNPNLKTGAIEIHANGVTVLSAAKTPPFAISDQAEEVS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R K+R+LDLRR  + + +  R  +  ++R  +    F++  TPILT S+PEGARD+L
Sbjct: 124 EDVRLKHRYLDLRRPAMFQTMQMRHNVTKAVRSFLDENGFLDIETPILTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMVSGIERYYQIARCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI++  E+++  +  E + G  +     R+ YD+A+ +YG+DKPD R  +++ +
Sbjct: 243 SFMSQEDIMSLAEDMMAKIMRE-TKGVEIKLPLPRMTYDEAMNKYGSDKPDTRFDMLLTD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           V++    +EF+VFS   +V  G  V AI  KGG G+  R   D +  +A + G  GLA  
Sbjct: 302 VSDIVKDTEFKVFSS--AVANGGVVKAINVKGGAGDYSRKDIDALGAFAANYGAKGLA-- 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W   E+  V   GP+AK  +      +   LD  +GD   F A D  +  + +  A R 
Sbjct: 358 -WVKVEADGVK--GPIAKFFDEEKQSKLIEALDAAEGDLLLFGA-DQFEVVAASLGALRL 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +E G+I+ N F F W++D+P  E + EE +   AH+PFTMP      L       +K
Sbjct: 414 KLGKERGLIDENLFNFLWVIDWPLLEHDPEEGRFYAAHHPFTMPVREDLELIETAPEDMK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+  G IR    ++  + F+ +G S E    +FG L  AF+ G PPHGG
Sbjct: 474 AQAYDLVLNGYELGGGSIRIFEKDIQEKMFALLGFSPEEAAEQFGFLLEAFEYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR+VMLL G  N+R+   FP + +   L+  +P  VS  QL EL L I +  K
Sbjct: 534 IALGLDRLVMLLAGRTNLRDTIAFPKTASASCLMTEAPGEVSDAQLDELHLSIKKKVK 591


>gi|327439657|dbj|BAK16022.1| aspartyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 590

 Score =  439 bits (1128), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/600 (40%), Positives = 353/600 (58%), Gaps = 20/600 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63
           RTH+CG +  ++ G  V L GWV + R  GG+IF+D+RD  GI QVV  +      E+A 
Sbjct: 4   RTHACGLVTAAEAGQEVVLKGWVQKRRDLGGLIFVDMRDREGIVQVVFGDQAKDALELAN 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+V+ + G V+ R A  IN N+ TG+IE+ A ++ I++ A+  P  +    E  E 
Sbjct: 64  KIRNEFVIEVKGTVVLRDASQINKNMKTGEIEVVASELTIINEAKNPPFAIDNNAEVSEE 123

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  ++     R+ +  ++R  +  E F+E  TPILT S+PEGARD+LVP
Sbjct: 124 LRLKYRYLDLRRPVMYDTFKMRSDVTRTIRNFLQNEGFLEVETPILTKSTPEGARDYLVP 183

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM  GF++YFQIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 184 SRVHDGEFYALPQSPQLFKQLLMVGGFEKYFQIARCFRDEDLRADRQP-EFTQVDIETSF 242

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D+I+   E +L  V ++   G  V   F R+ Y +A+ R+G+DKPD+R  + +  ++
Sbjct: 243 LSMDEIIEMNERLLTQVMKDV-KGIDVVTPFPRMSYKEAMDRFGSDKPDVRFGLELKQLS 301

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIFW 361
           +    S F VF+   +V  G EV AI  KG   N  R   D + E+A   G  GLA++  
Sbjct: 302 DIVKESAFGVFAN--AVANGGEVKAINVKGAAANYSRKDIDALGEFAGRYGAKGLAWL-- 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA----R 417
           ++ E G     GP+AK       + I    + Q GD   F+A       S  ADA    R
Sbjct: 358 KVTEEGL---NGPIAKFFEGEAADTIIQATEAQAGDLLLFVADK----SSVVADALGALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + +ELG+I+ + FEF WI+D+P +E++E E +   AH+PFT P      L   +   +
Sbjct: 411 LKLGKELGLIDESKFEFLWIVDWPLFEYDEAEGRYYAAHHPFTRPFDEDLELMNTNPKEV 470

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  ++  + F  +G ++E    +FG L  AF  G+PPHG
Sbjct: 471 RAQAYDIVLNGYELGGGSLRIYEPDLQAKMFELLGFTEEEARAQFGFLLEAFDYGVPPHG 530

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+A G+DR+VMLL G  N+R+   FP +     LL  +PS VS  QL EL LRI    KK
Sbjct: 531 GLAMGLDRLVMLLAGRTNLRDTIAFPKTATASCLLTDAPSQVSDAQLEELSLRIAATAKK 590


>gi|189218098|ref|YP_001938740.1| Aspartyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|238692082|sp|B3DX01|SYD_METI4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189184956|gb|ACD82141.1| Aspartyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 600

 Score =  439 bits (1128), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 252/596 (42%), Positives = 366/596 (61%), Gaps = 15/596 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M  YRTH C +L ++ VG   +L GWVH  R HGG++F+D+RD  GITQVV +P  D   
Sbjct: 6   MKGYRTHHCNELNLALVGHKAKLCGWVHSKRDHGGLLFIDLRDREGITQVVFHPEKDPPL 65

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F  AK +++E+V+ ++G V+ R A T NA+I TG+IEL A+ +EIL+ ++ LP  +  + 
Sbjct: 66  FAKAKQLKNEFVVKVEGKVVERPAGTKNASIPTGEIELEAESLEILNPSQPLPFNLDEDI 125

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  E +R  +RFLDLRR  +   +  R  + + +R  +  E F+E  TPIL+ S+PEGAR
Sbjct: 126 EN-EELRLSFRFLDLRRKKILNCLKVRHLVSSVVREYLSREGFLEVETPILSKSTPEGAR 184

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR++ G FYALPQAPQQYKQLLM +G D+YFQIA CFRDED RSDR P EF Q+D
Sbjct: 185 DFLVPSRLSPGKFYALPQAPQQYKQLLMVAGIDKYFQIARCFRDEDLRSDRQP-EFTQID 243

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SFVE +DI+  +E +++ +F +   G  +S  F+R+ Y +A+  YG+DKPDLR    
Sbjct: 244 LEASFVEVEDIMKWVEEMIQLIFLKVL-GIELSLPFVRLTYSEALDNYGSDKPDLRIEWQ 302

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356
           + +V   F +++F++F  +  +  G  + A+ AKG     N +  + +   A S G  GL
Sbjct: 303 IQDVGTVFKNTQFKLFRDV--IEKGGVIKALNAKGRAPMVNSSALEELVGIATSMGAKGL 360

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  R++   N     P+ K  +    + +   L M+  D   F AG   + C      
Sbjct: 361 AHI--RVE---NQEWKSPIVKFFSSEERKELERLLRMEPSDLVLFSAGPREQACLILGKI 415

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLL 475
           R H+A+    I  N ++F WI DFP +E++  E+K +  H+PFT P    +  L      
Sbjct: 416 RLHLAEMTQGIPGNQWKFAWITDFPLFEYSPLEQKWNSVHHPFTRPHPEDLTKLNEGKYD 475

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           +I+A  YD+V NG E+  G +R +  E+  + FS +GI KE  E  FG L +AFQ G PP
Sbjct: 476 AIRALAYDIVLNGVELGGGSLRIYEKELQEKVFSILGIGKERQELLFGHLLKAFQYGAPP 535

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGGIA G+DR VMLL G++++REV  FP +++  DLL  SPS V  +QL+EL +++
Sbjct: 536 HGGIALGLDRFVMLLTGSESLREVIAFPKNRHGVDLLTQSPSEVDYQQLKELNIQL 591


>gi|77405125|ref|ZP_00782224.1| aspartyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77410832|ref|ZP_00787189.1| aspartyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77163050|gb|EAO74004.1| aspartyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77176268|gb|EAO79038.1| aspartyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 583

 Score =  439 bits (1128), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/594 (40%), Positives = 354/594 (59%), Gaps = 25/594 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  GI Q+V NP+   ++    
Sbjct: 3   RSMYAGRVRSEHIGTSITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSASVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G+V +R  E  N N+ TG++EL  Q++ +L+ ++  P  +    E  
Sbjct: 63  AESLRSEFVIEVSGVVTAR--EQANDNLPTGEVELKVQELSVLNTSKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I + +E ++  V ++ + G  VS  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDIVEGMIAKVMKD-TKGLEVSLPFPRMAYDDAMNNYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+   V    +   +  K    +R   D++ E A+  G  GLA++ +
Sbjct: 299 LTEVVKEVDFKVFSEASVV----KAIVVKNKADKYSRKNIDKLTEIAKQYGAKGLAWLKY 354

Query: 362 RLDESGNVAGMGPVAKHLNIVN---TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
               + N    GPVAK L  +    TEA    L +++ D   F+A D L+  +    A R
Sbjct: 355 ----ADNTIS-GPVAKFLTAIEGRLTEA----LQLENNDLILFVA-DSLEVANETLGALR 404

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IA+EL +I+ + F F WI+D+P +EW+EEE +   AH+PFT+P          DL  +
Sbjct: 405 TRIAKELELIDYSKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTAETAHELEGDLAKV 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  +   + F  +G S E  + +FG L  A   G PPHG
Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQKDTQERMFKALGFSAESAQEQFGFLLEAMDYGFPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L +
Sbjct: 525 GLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEQQLEELSLTV 578


>gi|146329788|ref|YP_001210002.1| aspartyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|146233258|gb|ABQ14236.1| aspartyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 595

 Score =  439 bits (1128), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/594 (39%), Positives = 357/594 (60%), Gaps = 10/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACF 59
           M ++RTH   ++  +     VR++GWVHR R HGGIIF+D+RD  G+ QVV +P +   F
Sbjct: 1   MSKFRTHYASEVTETLETQTVRVAGWVHRRRDHGGIIFIDLRDRSGLVQVVFDPANQETF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ VR+E+ L I+G V  R   T+N ++I+G+IE+ A  + ILS +   P  +    +
Sbjct: 61  AKAEQVRNEYCLSIEGRVRPRPEGTVNPDLISGKIEILAHDLNILSQSPTPPFQLDDLTD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR +DLRR  + KN++ R+++  S+R  +    F++  TP+LT ++PEGARD
Sbjct: 121 VSEEVRLKYRTIDLRRPQMQKNLILRSKVAASLRRYLNEHGFMDIETPMLTKATPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR + G  +ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF QLD+
Sbjct: 181 YLVPSRTHPGKVFALPQSPQLFKQMLMMSGFDRYYQIVRCFRDEDLRADRQP-EFTQLDI 239

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+E++DI+  ME ++RG+F+E  + + + + F R+ Y +A+RRY +DKPDLR P+ +
Sbjct: 240 ETSFLEEEDIMQLMETMIRGIFKEHLDVDLI-DPFPRMTYAEAMRRYASDKPDLRIPLEL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEV-WAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
            +V +     +F+VF+ +     G  V   +P  G    R   D    +    G  GLAY
Sbjct: 299 IDVEDLVADCDFKVFANVAKQENGRVVALKLPNGGERLTRKEIDDYTAYVARYGAKGLAY 358

Query: 359 IFWRLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           I  ++++   + G+  P+ K L      AI  R+  Q GD  FF   D  +  + A  A 
Sbjct: 359 I--KVNDPSKIDGLQSPIVKFLGENVALAIIKRVQAQAGDIVFF-GADKARIVNDAMGAL 415

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +  +L ++ C  +   W++DFP +E++E+E +    H+PFT P+    S   N+  +
Sbjct: 416 RIKLGHDLDLLTC-PWAPMWVVDFPMFEFDEKEHRWTSVHHPFTAPKTDDLSELENNPAA 474

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + +  YD+V NG EI  G IR H  +V  Q   ++GI  E  + +FG L  A + G PPH
Sbjct: 475 VVSRAYDMVLNGTEIGGGSIRIHREDVQTQVLKSLGIDAEQAQEKFGFLLNALKYGAPPH 534

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           GGIA G+DR++M++ GAK++R+V  FP +Q    LL  +PS  S  Q +EL +R
Sbjct: 535 GGIAFGLDRLIMIMAGAKSIRDVMAFPKTQTAYCLLTDAPSEASDAQFKELHIR 588


>gi|296331701|ref|ZP_06874170.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675341|ref|YP_003867013.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151296|gb|EFG92176.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413585|gb|ADM38704.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 592

 Score =  439 bits (1128), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/600 (41%), Positives = 355/600 (59%), Gaps = 20/600 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ CGD+    +G  V L GWV + R  GG+IF+D+RD  GI QVV NPD +     IA
Sbjct: 4   RTYYCGDITEKAIGESVTLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKEALAIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
           + +R+E+VL I G V++R   T+N N+ TG IE+ A  + +LS A+  P  +  + E   
Sbjct: 64  EGIRNEYVLDIQGKVVAREEGTVNTNLKTGAIEIHADGVTVLSAAKTPPFAISDQAEDVS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R K+R+LDLRR  + + +  R  +  ++R  +    F++  TPILT S+PEGARD+L
Sbjct: 124 EDVRLKHRYLDLRRPAMFQTMQMRHNVTKAVRSFLDDNGFLDIETPILTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMVSGIERYYQIARCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI++  E+++  +  E + G  +     R+ YD+A+  YG+DKPD R  +++ +
Sbjct: 243 SFMSQEDIMSLAEDMMAKIMRE-TKGVELKLPLPRMTYDEAMNSYGSDKPDTRFDMLLTD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           V++    +EF+VFS   +V  G  V AI  KGG G+  R   D +  +A + G  GLA  
Sbjct: 302 VSDIVKDTEFKVFSS--AVANGGVVKAINVKGGAGDYSRKDIDALGAFAANYGAKGLA-- 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD---A 416
            W   E+  V   GP+AK  +      +   LD  +GD   F A    KF   AA     
Sbjct: 358 -WVKVEADGVK--GPIAKFFDEEKQSKLIEALDAAEGDLLLFGAD---KFEVVAASLGAL 411

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  + +E G+I+ N F F W++D+P  E + EE +   AH+PFTMP      L       
Sbjct: 412 RLKLGKERGLIDENLFNFLWVIDWPLLEHDPEEGRFYAAHHPFTMPVREDLELIETAPED 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +KA  YDLV NG+E+  G IR    ++  + F+ +G S+E    +FG L  AF+ G PPH
Sbjct: 472 MKAQAYDLVLNGYELGGGSIRIFEKDIQEKMFALLGFSQEEAAEQFGFLLEAFEYGAPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA G+DR+VMLL G  N+R+   FP + +   L+  +P  VS  QL EL L I +  K
Sbjct: 532 GGIALGLDRLVMLLAGRTNLRDTIAFPKTASASCLMTEAPGEVSDAQLDELHLSIKKKVK 591


>gi|322374025|ref|ZP_08048559.1| aspartate--tRNA ligase [Streptococcus sp. C150]
 gi|321276991|gb|EFX54062.1| aspartate--tRNA ligase [Streptococcus sp. C150]
          Length = 583

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/596 (40%), Positives = 359/596 (60%), Gaps = 29/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP   D+A  E 
Sbjct: 3   RSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENADAAVVET 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N N+ TG +EL  + ++IL+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGTVEAR--EQANDNLPTGAVELKVEDLKILNTAKTTPFEIKDGVEAS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +++R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHAIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLNEQEIQDITEGLIAKVMKE-TKGINVTLQFPRMSYDDAMNNYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +T+     +F+VF++  +V       AI  KG     +R   D++ E+A+  G  GLA++
Sbjct: 299 LTDIVKGVDFKVFAEAPAVK------AIVVKGNADKYSRKSIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
                +  + A  GPVAK L  +  +     L +++ D   F+A D L+  +    A RN
Sbjct: 353 -----KMTDGALAGPVAKFLTSIEGKLTDA-LQLEENDLVLFVA-DTLEVANNTLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+EL +I+   F F W++D+P +EW+EEE +   AH+PFT+P     S    DL  ++
Sbjct: 406 QIAKELDMIDTTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEESASNLEGDLSKVR 465

Query: 479 AFQYDLVCNGFEIASGGIR-NH--MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           A  YD+V NG+E+  G +R NH  + E ML+A   +G S+E    +FG L  A   G PP
Sbjct: 466 AVAYDIVLNGYELGGGSLRINHKDLQERMLKA---LGFSEESAYEQFGFLLEAMDYGFPP 522

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG+A G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL L +
Sbjct: 523 HGGLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHV 578


>gi|22538241|ref|NP_689092.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76798548|ref|ZP_00780781.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77414043|ref|ZP_00790214.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|46577260|sp|Q8DWV5|SYD_STRA5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|22535154|gb|AAN00965.1|AE014287_5 aspartyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76586112|gb|EAO62637.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77159925|gb|EAO71065.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 583

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/594 (40%), Positives = 354/594 (59%), Gaps = 25/594 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  GI Q+V NP+   ++    
Sbjct: 3   RSMYAGRVRSEHIGTSITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSASVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G+V +R  E  N N+ TG++EL  Q++ IL+ ++  P  +    E  
Sbjct: 63  AESLRSEFVIEVSGVVTAR--EQANDNLPTGEVELKVQELSILNTSKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I + +E ++  V ++ + G  VS  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDIVEGMIAKVMKD-TKGLEVSLPFPRMAYDDAMNNYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+   V    +   +  K    +R   D++ E A+  G  GLA++ +
Sbjct: 299 LTEIVKEVDFKVFSEASVV----KAIVVKDKADKYSRKNIDKLTEIAKQYGAKGLAWLKY 354

Query: 362 RLDESGNVAGMGPVAKHLNIVN---TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
               + N    GPVAK L  +    TEA    L +++ D   F+A D L+  +    A R
Sbjct: 355 ----ADNTIS-GPVAKFLTAIEGRLTEA----LQLENNDLILFVA-DSLEVANETLGALR 404

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IA+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  +
Sbjct: 405 TRIAKELELIDYSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTAETAHELEGDLAKV 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  +   + F  +G S E  + +FG L  A   G PPHG
Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQKDTQERMFKALGFSAESAQEQFGFLLEAMDYGFPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L +
Sbjct: 525 GLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEQQLEELSLTV 578


>gi|312862480|ref|ZP_07722723.1| aspartate--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322515838|ref|ZP_08068782.1| aspartate--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|311102123|gb|EFQ60323.1| aspartate--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322125724|gb|EFX97046.1| aspartate--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 583

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/595 (40%), Positives = 358/595 (60%), Gaps = 27/595 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP++A     E 
Sbjct: 3   RSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENADANVVET 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  NAN+ TG +EL  + +++L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGTVEAR--EQANANLPTGAVELKVEDLKVLNTAKTTPFEIKDGVEAS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +++R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHAIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLNEQEIQDITEGLIAKVMKE-TKGIEVTLPFPRMSYDDAMNNYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VF++  +V       AI AKG     +R   D++ E+A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFAEAPAVK------AIVAKGNADKYSRKSIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                +  + A  GPVAK L  +  + +   L +++ D   F+A       +     RN 
Sbjct: 353 -----KMTDGALAGPVAKFLTSIE-DKLTDTLHLEENDLVLFVADTHEIANNTLGALRNQ 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +I+   F F W++D+P +EW+EEE +   AH+PFT+P     +    DL  ++A
Sbjct: 407 IAKELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIR-NH--MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             YD+V NG+E+  G +R NH  + E ML+A   +G S+E    +FG L  A   G PPH
Sbjct: 467 VAYDIVLNGYELGGGSLRINHKDLQERMLKA---LGFSEESAYEQFGFLLEAMDYGFPPH 523

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GG+A G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL L +
Sbjct: 524 GGLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHV 578


>gi|321312283|ref|YP_004204570.1| aspartyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320018557|gb|ADV93543.1| aspartyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 592

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/598 (40%), Positives = 356/598 (59%), Gaps = 16/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ CGD+    +G  V L GWV + R  GG+IF+D+RD  GI QVV NPD +     +A
Sbjct: 4   RTYYCGDITEKAIGESVTLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKEALAVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP 121
           + +R+E+VL + G V++R   T+N N+ TG IE+ A  + +LS A+  P  +  +  E  
Sbjct: 64  EGIRNEYVLDVQGKVVAREEGTVNPNLKTGAIEIHADGVTVLSAAKTPPFAISDQAEEVS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R K+R+LDLRR  + + +  R  +  ++R  +    F++  TPILT S+PEGARD+L
Sbjct: 124 EDVRLKHRYLDLRRPAMFQTMQMRHNVTKAVRSFLDENGFLDIETPILTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMVSGIERYYQIARCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI++  E+++  +  E + G  +     R+ YD+A+ +YG+DKPD R  +++ +
Sbjct: 243 SFMSQEDIMSLAEDMMAKIMRE-TKGVEIKLPLPRMTYDEAMNKYGSDKPDTRFDMLLTD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           V++    +EF+VFS   +V  G  V AI  KGG G+  R   D +  +A + G  GLA  
Sbjct: 302 VSDIVKDTEFKVFSS--AVANGGVVKAINVKGGAGDYSRKDIDALGAFAANYGAKGLA-- 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W   E+  V   GP+AK  +      +   LD  +GD   F A D  +  + +  A R 
Sbjct: 358 -WVKVEADGVK--GPIAKFFDEEKQSKLIEALDAAEGDLLLFGA-DQFEVVAASLGALRL 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +E G+I+ N F F W++D+P  E + EE +   AH+PFTMP      L       +K
Sbjct: 414 KLGKERGLIDENLFNFLWVIDWPLLEHDPEEGRFYAAHHPFTMPVREDLELIETAPEDMK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+  G IR    ++  + F+ +G S E    +FG L  AF+ G PPHGG
Sbjct: 474 AQAYDLVLNGYELGGGSIRIFEKDIQEKMFALLGFSPEEAAEQFGFLLEAFEYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR+VMLL G  N+R+   FP + +   L+  +P  VS  QL EL L I +  K
Sbjct: 534 IALGLDRLVMLLAGRTNLRDTIAFPKTASASCLMTEAPGEVSDAQLDELHLSIKKKVK 591


>gi|76788619|ref|YP_330636.1| aspartyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|97196930|sp|Q3JYL7|SYD_STRA1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|76563676|gb|ABA46260.1| aspartyl-tRNA synthetase [Streptococcus agalactiae A909]
          Length = 583

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/594 (40%), Positives = 354/594 (59%), Gaps = 25/594 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  GI Q+V NP+   ++    
Sbjct: 3   RSMYAGRVRSEHIGTSITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSASVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G+V +R  E  N N+ TG++EL  Q++ +L+ ++  P  +    E  
Sbjct: 63  AESLRSEFVIEVSGVVTAR--EQANDNLPTGEVELKVQELSVLNTSKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I + +E ++  V ++ + G  VS  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDIVEGMIAKVMKD-TKGLEVSLPFPRMAYDDAMNNYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+   V    +   +  K    +R   D++ E A+  G  GLA++ +
Sbjct: 299 LTEVVKEVDFKVFSEASVV----KAIVVKNKADKYSRKNIDKLTEIAKQYGAKGLAWLKY 354

Query: 362 RLDESGNVAGMGPVAKHLNIVN---TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
               + N    GPVAK L  +    TEA    L +++ D   F+A D L+  +    A R
Sbjct: 355 ----ADNTIS-GPVAKFLTAIEDRLTEA----LQLENNDLILFVA-DSLEVANETLGALR 404

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IA+EL +I+ + F F WI+D+P +EW+EEE +   AH+PFT+P          DL  +
Sbjct: 405 TRIAKELELIDYSKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTAETAHELEGDLAKV 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  +   + F  +G S E  + +FG L  A   G PPHG
Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQKDTQERMFKALGFSAESAQEQFGFLLEAMDYGFPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L +
Sbjct: 525 GLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEQQLEELSLTV 578


>gi|222153888|ref|YP_002563065.1| aspartyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|254781755|sp|B9DW80|SYD_STRU0 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|222114701|emb|CAR43801.1| aspartyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 582

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/594 (40%), Positives = 363/594 (61%), Gaps = 25/594 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEI 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+       EI
Sbjct: 3   RSMYAGHVRSEHIGQELTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEDVAKDVMEI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G+V  R  +  N  I TG +EL  ++I +L+ ++  P  +    E  
Sbjct: 63  AESLRSEYVIEVTGIVEER--QQANNQIATGAVELKVEQITVLNTSKTTPFEIKDGVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +   NFI+  TP+LT S+PEGARD+L
Sbjct: 121 DETRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLNFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+++G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRISEGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V +E + G  VS  F R+ YD A+ +YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKE-TKGIDVSLPFPRMSYDLAMNQYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V+E     +F+VFS+   V       AI  KG     +R   D+M E+A+  G  GLA+I
Sbjct: 299 VSELVKGIDFKVFSQAPVVK------AIVVKGNADRYSRKDIDKMTEFAKQFGAKGLAWI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
             ++D+ G + G  PV+K L  + +  +   L + D D   F+A D L   +    A RN
Sbjct: 353 --KVDD-GKLTG--PVSKFLTEIES-LLTDALQLVDNDLVLFVA-DELDIANATLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSI 477
            IA+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+P +     L+G DL ++
Sbjct: 406 RIAKELQLIDESAFNFLWVIDWPMFEWSEEEGRYMSAHHPFTLPTEASAHELEG-DLANV 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  ++  + F  +G ++E  + +FG L  A   G PPHG
Sbjct: 465 RAIAYDIVLNGYELGGGSLRINQRDLQERMFKALGFTEEEAKEQFGFLLEAMDYGFPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L+I
Sbjct: 525 GLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEKQLEELSLQI 578


>gi|325697963|gb|EGD39846.1| aspartate--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 584

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 349/591 (59%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMTT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVLDVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G  VS  F R+ YDDA+  YG DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++  
Sbjct: 299 LTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV-- 352

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              +  N    GPVAK L  + ++     L +++ D   F+A D L+  + A  A R  +
Sbjct: 353 ---KVANGELAGPVAKFLTDLTSQLTEA-LQLKNNDIVLFVA-DTLEVANAALGALRVRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A 
Sbjct: 408 AKELDLIDADTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAVEQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++
Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578


>gi|319940130|ref|ZP_08014484.1| aspartyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319810844|gb|EFW07171.1| aspartyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 584

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/597 (39%), Positives = 353/597 (59%), Gaps = 19/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  + L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVRSEHVGQKITLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPENVAKEVMET 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V SR+    N  + TG +EL  + + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEYVIEVTGKVESRT--QANDKLATGAVELHVEHLTVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  +  N+  R ++ +S+R  +    FI+  TP LT S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLANLKLRAKVTHSIRNYLDELEFIDVETPFLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA   W
Sbjct: 299 LTELVKGIDFKVFSEA----PAVKAIVVKNAADSYSRKDIDKLTEQAKQYGAKGLA---W 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
               SG + G  PVAK L  + ++     L ++D D   F+A D L+  + A  A R   
Sbjct: 352 VKVTSGELNG--PVAKFLKDLTSDLTDA-LQLEDNDLVLFVA-DTLEVANAALGALRIRF 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A 
Sbjct: 408 AKELGLIDESKFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQADTAHELEGDLSKVRAI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++  + F  +G S+E   ++FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINHKDLQERMFKALGFSEEEATDQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR VMLL G +N+REV  FP +    D +  +PS V  +QL EL L++  + +K
Sbjct: 528 IGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSIVDAKQLEELSLQVETHEEK 584


>gi|296123536|ref|YP_003631314.1| aspartyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296015876|gb|ADG69115.1| aspartyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 589

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/593 (39%), Positives = 356/593 (60%), Gaps = 15/593 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61
           YRT +CG+L +  VG    L GWV   R H G++F+D+RD YGITQVV   D+      I
Sbjct: 2   YRTKTCGELRIEHVGQVATLCGWVDSYRDHKGVVFIDLRDRYGITQVVFQADTPTDMQTI 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE V+ + G V++R A   N  ++TGQ+E+  +++ +L+ ++  P     +    
Sbjct: 62  ARGLRSEDVIQVTGEVLARGAGLENPKLVTGQVEVRGRELTLLNKSKTPPFEPRTQDLPN 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +YR+LDLRR  + + I+ R ++  + R      NF+E  TPIL  S+PEGARD+L
Sbjct: 122 EELRMQYRYLDLRRPVVQQAIILRHKLAKATRDYFDRHNFLEIETPILGRSTPEGARDYL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++GSFYALPQ+PQ YKQ+LM +G+DRYFQIA CFRDED R+DR P EF Q+D+EM
Sbjct: 182 VPSRVHEGSFYALPQSPQLYKQILMVAGYDRYFQIARCFRDEDLRADRQP-EFTQIDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +FV+QDDIL+T++ ++  + +E   G  +     R+ + + + +YG+DKPDLR  + +  
Sbjct: 241 AFVKQDDILSTIDGLMAHLLKEL-RGEELPLPLPRLTHREVMEKYGSDKPDLRFGMELIC 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           + E   +  F VF    ++  G  V  I A G     +R   D + E+ +  G  GLA  
Sbjct: 300 LKEIAENCGFSVFKN--TIANGNRVRGIVAPGAAEKYSRKQIDELTEFVKQYGAQGLA-- 355

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
           F+R+ E G  +   P+AK  +  + + +  +L  + GD  F +A D  K  S A  A RN
Sbjct: 356 FFRVKEEGLDS---PIAKFFSAEDQQKLIAKLGARAGDLIFCVA-DTAKVSSAALGALRN 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+EL + +    +  W++DFP ++W+E+E++    H+PF  P      +   D   ++
Sbjct: 412 RLAKELALYDPKEMKIAWVVDFPMFQWDEDEQRWVAEHHPFCQPHEEDIDILETDPGKVR 471

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLVCNG+E ASG +R H   V  + FS +GI  E  E RFG L  A + G PPH G
Sbjct: 472 AQSYDLVCNGYEAASGSVRIHDPAVQQRIFSMMGIQPEEAELRFGFLLEALRYGAPPHAG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR  M+  G  N+R+V  FP +Q   DLL G+P+ V  +QLR+L +++
Sbjct: 532 VALGLDRWSMMFSGTDNIRDVIAFPKNQKASDLLTGAPAPVDTKQLRDLRIKV 584


>gi|189485338|ref|YP_001956279.1| aspartyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|226736547|sp|B1GZY6|SYD_UNCTG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|170287297|dbj|BAG13818.1| aspartyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 584

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/591 (39%), Positives = 354/591 (59%), Gaps = 10/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CGD+  S +G  + + GWVH  R HGG+IF+D+RD  GI Q+V  P++   FE A+
Sbjct: 3   RSGYCGDIRESSIGKEIAVCGWVHSRRDHGGVIFIDLRDREGILQIVFQPENKEIFEAAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+V+ + G V +R   T+N N+ TG +EL A +++IL+ +  LP  +    +  E 
Sbjct: 63  KLRSEYVIAVKGWVRNRPFGTLNTNMSTGNVELVAVELKILNTSPGLPFEISDYIDTSEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  L KN V R +I   +R  +  E F+E  TP LT S+PEGARDFLVP
Sbjct: 123 LRLKYRYLDLRRPNLQKNFVMRHKISKEIRNFLNEEGFLEIETPFLTKSTPEGARDFLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR++ G+F+ALPQ+PQ +KQ+LM++GFD+Y+QI  CFRDED R+DR P EF Q+D+EMSF
Sbjct: 183 SRLHHGNFFALPQSPQLFKQILMSAGFDKYYQIVRCFRDEDLRADRQP-EFTQVDVEMSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+++D++  +E +L  VF+   N + +   F R+ Y +A+ R+G+DKPD R  + + + +
Sbjct: 242 VDEEDVMVVIERMLARVFKMTLNLD-IKMPFERMPYSEAMLRFGSDKPDTRFEVEIKDFS 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
               +S F VFS ++S         IP KG   +R+    + ++    G  GL ++  ++
Sbjct: 301 RELKNSGFSVFSSVISKGGIVRGLCIP-KGASFSRSEIAGLTKFVGEYGAKGLVWM--KI 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G  +    + K+           +L+ + GD   F+A +           R  + +E
Sbjct: 358 TDTGADSN---IVKYFKEYEIRVFISKLNAKSGDLIVFLADEEKTVAQGLGALRLKVGRE 414

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G+I+ N F F W++DFP  EW++EE++    H+PFT+P+   +SL   +    KA  YD
Sbjct: 415 SGLIDKNKFNFLWVVDFPLMEWDKEEQRWQALHHPFTLPKDA-DSLTKENAGRAKAKAYD 473

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H S +  + F+ + IS E  E +FG L +A   G PPHGG A G 
Sbjct: 474 VVLNGIELGGGSIRIHKSGIQKKIFNILDISDESAEKKFGFLLKALTYGAPPHGGAALGF 533

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR+  L+ G  ++REV  FP +Q   D L  +P+ VS   L+ELGL+ +EN
Sbjct: 534 DRLCALISGEDSIREVIAFPKTQKAVDPLSNAPAAVSDNHLKELGLQQIEN 584


>gi|37521497|ref|NP_924874.1| aspartyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|46577177|sp|Q7NJA4|SYD_GLOVI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|35212494|dbj|BAC89869.1| aspartyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 595

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/601 (39%), Positives = 351/601 (58%), Gaps = 19/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+  CG L    +G  V L GW+   R HGG+IFLD+RD+ GI Q+VA+P      + +A
Sbjct: 2   RSDYCGTLRSEHIGKTVSLYGWIDGWRDHGGVIFLDLRDYTGIVQIVADPQRTPESYHLA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+R+E+V+ ++G V +R   ++N  + TG +E+ A  + +L+ AE  P  +  + E  E
Sbjct: 62  SSLRNEYVVRVEGRVSARPEHSLNPRLSTGTVEVYADTLAVLNRAETPPFAISKDEEVDE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R K+R+LDLRR  + K +  R R++  MR  +    F E  TP+L  S+PEGARD+LV
Sbjct: 122 KLRLKFRYLDLRRGRMQKLLRLRHRVMQIMRRHLDERGFTEIETPVLVKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G ++ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF QLDMEMS
Sbjct: 182 PSRVNPGDWFALPQSPQLFKQLLMVAGFDRYYQIARCFRDEDLRADRQP-EFTQLDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I+   E ++  + +E + G  +S    R+ Y +A+ RYG+DKPD R  + +  V
Sbjct: 241 FLSMEEIIALNEGLVAAILQE-TMGLELSLPLPRLTYAEAMVRYGSDKPDTRFGLELVEV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG----NRAFCDRMNEWARSQGQPGLAY 358
           +E F  S F+V S   +V  G +V  +P  G  G           + E+    G  GL  
Sbjct: 300 SEVFRESSFQVLSG--AVAAGGKVVCLPVPGAEGITNTRVKPGGDLFEFVTQFGARGL-- 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS---FAAD 415
           +F R+ E G V  +G  +K L       +  +   Q G    F AGD     +   +   
Sbjct: 356 LFARVREGGQVDTIGAFSKSLTPEIAAGMIEKTGAQPGHLLLFGAGDRTAVPTVLDYMGR 415

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  + +ELG+I+ N     W+ DFP +EWN EEK+++  H+PFT P+   E    +DL 
Sbjct: 416 LRLKMGEELGLIDPNRHNLLWVTDFPMFEWNAEEKRLEALHHPFTAPRPEDE----HDLK 471

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YD++ NG E+  G +R +   +  + F  +G+++E    +FG L  AF+ G PP
Sbjct: 472 TARALAYDIIWNGVEVGGGSLRIYRRALQERVFETIGLTEEEARAKFGFLLDAFEYGTPP 531

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G DR VML+ G +++REV  FP +Q   DL++G+PS V+  QL+EL +R    P
Sbjct: 532 HGGIAYGFDRFVMLIAGEQSIREVIAFPKTQRAQDLMLGAPSAVAERQLKELNVRSTLPP 591

Query: 596 K 596
           K
Sbjct: 592 K 592


>gi|323702181|ref|ZP_08113848.1| aspartyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532868|gb|EGB22740.1| aspartyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 601

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/589 (40%), Positives = 349/589 (59%), Gaps = 11/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L    +G  V L GWV R R HGG+IF+D+RD  G+ Q+V +PD   A F+ A
Sbjct: 10  RTHHCGELSKQHMGQEVVLMGWVQRRRDHGGLIFVDLRDRSGLVQIVFSPDVDEAAFKKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VR+E+VL I G V  R   T N N++TG+IE+ A  + +L+ A+  P  +    +  E
Sbjct: 70  EAVRNEYVLAIVGKVQERPEGTANPNMVTGEIEVYAHTLRVLNRAKTPPFYIEDHIDVDE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YR+LDLRR  + ++++ R R   S+R  +    F+E  TP+LT S+PEGARD+LV
Sbjct: 130 NLRLRYRYLDLRRPEMQQSLIMRHRAAKSVRDFLDNHGFLEIETPMLTKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQLLM +G ++YFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRVNPGKFYALPQSPQIFKQLLMLAGMEKYFQIVRCFRDEDLRADRQP-EFTQIDLEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ DD+++ ME ++  V ++ + G  +   F R+ Y +A+  YG+DKPD R  + + ++
Sbjct: 249 FVDADDVMSLMEQMIAKVCKD-TIGLEIKVPFPRLSYQEAMDLYGSDKPDTRFDMELKDI 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T       F+VF+   +   G +V  I AKG    +R   D +  +       GLAY+  
Sbjct: 308 TPIAAKCGFKVFNSAAAA--GGQVKGINAKGCAAFSRKEIDDLTAFVAVYKAKGLAYMM- 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            ++E G+V    P+AK  N     AI+ +L+ Q GD   F+A  P    +     R H+A
Sbjct: 365 -INEDGSVK--SPIAKFFNEDEIAAIKDKLEAQPGDLLLFVADKPAVVAAALGALRLHLA 421

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           Q L +I  + + F W++DFP  E++ EE +    H+PFT P      L   D   ++A  
Sbjct: 422 QRLNLIPEDRWNFLWVIDFPLLEYDAEEGRYFAMHHPFTSPVEEDIPLLQTDPGKVRARA 481

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  +V    F  +G+  E  + +FG +  AF+ G PPHGGIA 
Sbjct: 482 YDMVLNGVEVGGGSIRIHRRDVQELMFKALGLGPEEAKEKFGFMLEAFEYGAPPHGGIAF 541

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G DR+VMLL G  ++R+V  FP + +   L+  +P  V   QL EL +R
Sbjct: 542 GFDRLVMLLTGKDSIRDVIAFPKTASATCLMTQAPDVVDPAQLVELHIR 590


>gi|139438291|ref|ZP_01771844.1| Hypothetical protein COLAER_00833 [Collinsella aerofaciens ATCC
           25986]
 gi|133776488|gb|EBA40308.1| Hypothetical protein COLAER_00833 [Collinsella aerofaciens ATCC
           25986]
          Length = 595

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/595 (40%), Positives = 351/595 (58%), Gaps = 13/595 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSAC 58
           H   T +CG+L   +VG  V L+GWV R R HGG+IF D+RD  GITQ+  +P   D   
Sbjct: 10  HSMHTRTCGELRRENVGEEVTLTGWVSRRRDHGGLIFCDLRDREGITQLTFDPEHSDGDA 69

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F+IA+++R EW + I G+V SR  ET NA + TG+IE+     E+L+ +   P  +    
Sbjct: 70  FKIAETMRPEWPIKIHGVVRSRGEETTNAKLATGEIEVLTDHAEVLNTSVTPPFQIEDGI 129

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  E  R +YR+LDLRR  +  N+  R+    ++R  +    F+E  TP L  S+PEGAR
Sbjct: 130 ETSEDTRLRYRYLDLRRPEMMANLKLRSDFTFAIREALHNREFMEVETPSLFKSTPEGAR 189

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DF+VPSR+  G+FYALPQ+PQ  KQLLM  G +RY+Q+A CFRDED R+DR P EF Q+D
Sbjct: 190 DFIVPSRIQPGNFYALPQSPQLLKQLLMVGGVERYYQVAKCFRDEDLRADRQP-EFTQVD 248

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q+D+++ +E VL   F     G  +     R+ Y +A+  YG+DKPD R  + 
Sbjct: 249 IEMSFVDQNDVMSALEEVLADAFGRM--GVEMPTPLRRMDYWEAMDTYGSDKPDTRYGMH 306

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + ++T+ F +S+F+VF+   +   G  V AI AKG G   RA  D++   A + G  GLA
Sbjct: 307 LVDLTDIFANSKFKVFATAAN-EEGSVVKAINAKGAGAWARAKIDKLAGVASTFGAKGLA 365

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +I +R D S N     P+ K  +     A+R R+D++ GD   F AG  L         R
Sbjct: 366 WIAFREDGSIN----SPIVKFFSDEEMAALRERMDVEPGDLVMFAAGPRLLSDEILGGMR 421

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +H+A  L  I     +F W+++FP + W+E+ K     H PFT+P     +    D L+ 
Sbjct: 422 SHMANALE-IKREGHDFLWVVNFPLFHWDEDRKAYAAEHQPFTLPTETDIAKIEADPLAA 480

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD V +GFE   GG+R H +E+ +     +G ++E  E++FG L  A + G PP G
Sbjct: 481 GSCTYDFVMDGFEAGGGGMRIHNAEMQMSMLKLLGFTEERAESQFGFLMEALKFGAPPMG 540

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G A G+DR+ MLL G+ ++R+V  FP + +  DL+ G+PS VS  QL+++ LR++
Sbjct: 541 GFALGLDRVCMLLTGSDSIRDVMAFPKTASGSDLMSGAPSAVSGAQLKDVSLRLM 595


>gi|306834555|ref|ZP_07467668.1| aspartate--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|296777685|gb|ADH43102.1| aspartyl-rRNA synthetase [uncultured bacterium MID12]
 gi|304423357|gb|EFM26510.1| aspartate--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 582

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/597 (40%), Positives = 356/597 (59%), Gaps = 25/597 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           RT   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    ++   
Sbjct: 3   RTMYAGRVRSEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSSDVMTT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+R+E+V+ + G V  R  E  N N+ TG +EL    + +L+ A+  P  +  + E  
Sbjct: 63  AESLRNEFVIEVTGEVAQREQE--NKNLPTGAVELKVSALTVLNTAKTTPFEIKDDVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  +  N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DENRLRYRYLDLRRPKMLNNFKLRAKVTHSIRNYLDELEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+DME 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDMET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   DI +  E ++  V ++ + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSDQDIQDITEGMIAKVMKD-TKGIDVTLPFPRMSYDDAMNNYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+   V       AI  KG     +R   D++ E+A+  G  GLA++
Sbjct: 299 LTEVVKDVDFKVFSQAPVVK------AIVVKGNADKYSRKNIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            +      + A  GPVAK L  +  + + V L +++ D   F+A D L+  +    A R 
Sbjct: 353 KF-----TDGAITGPVAKFLTSIE-DKLTVSLQLEENDLVLFVA-DTLEVANNTLGALRT 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSI 477
            IA+EL +++ + F F W++D+P +EW+EEE++   AH+PFT+P +     L+G DL  +
Sbjct: 406 RIAKELDMVDNSKFNFLWVVDWPMFEWSEEEERYMSAHHPFTLPTEESAHELEG-DLAKV 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  E+  + F  +G + E   ++FG L  A   G PPHG
Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQKELQERMFKALGFTAEEANDQFGFLLEAMNYGFPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL L I  N
Sbjct: 525 GLAIGLDRFVMLLAGEDNIREVIAFPKNNKAADPMTQAPSLVADKQLDELALAIETN 581


>gi|25012098|ref|NP_736493.1| aspartyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|77408131|ref|ZP_00784877.1| aspartyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|46577262|sp|Q8E2Q7|SYD_STRA3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|24413642|emb|CAD47719.1| aspartyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|77173231|gb|EAO76354.1| aspartyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 583

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/594 (39%), Positives = 356/594 (59%), Gaps = 25/594 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  GI Q+V NP+   ++    
Sbjct: 3   RSMYAGRVRSEHIGTSITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVAASVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G+V +R  E  N N+ TG++EL  Q++ +L+ ++  P  +    E  
Sbjct: 63  AESLRSEFVIEVSGVVTAR--EQANDNLPTGEVELKVQELSVLNTSKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I + +E ++  V ++ + G  VS  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDIVEGMIAKVMKD-TKGLEVSLPFPRMAYDDAMNNYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+   V    +   +  K    +R   D++ E A+  G  GLA++ +
Sbjct: 299 LTEIVKEVDFKVFSEASVV----KAIVVKDKADKYSRKNIDKLTEIAKQYGAKGLAWLKY 354

Query: 362 RLDESGNVAGMGPVAKHLNIVN---TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
            +D + +    GPVAK L  +    TEA    L +++ D   F+A D L+  +    A R
Sbjct: 355 -VDNTIS----GPVAKFLTAIEGRLTEA----LQLENNDLILFVA-DSLEVANETLGALR 404

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IA+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  +
Sbjct: 405 TRIAKELELIDYSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTAETAHELEGDLAKV 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  +   + F  +G S E  + +FG L  A   G PPHG
Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQKDTQERMFKALGFSAESAQEQFGFLLEAMDYGFPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L +
Sbjct: 525 GLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEQQLEELSLTV 578


>gi|323350720|ref|ZP_08086381.1| aspartate--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322123140|gb|EFX94831.1| aspartate--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 584

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/591 (39%), Positives = 351/591 (59%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVRKDHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+VL + G V +R  E +N  + TG +EL  + + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEYVLEVTGKVAAR--EQVNDKLATGSVELHVENLTVLNTAKTTPFEIKDGIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  VS  F R+ YDDA+  YG DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDITEGLIARVMKE-TKGIEVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++  
Sbjct: 299 LTDLVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV-- 352

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              +  +    GPVAK L  + +  I   L +++ D   F+A D L+  + A  A R  +
Sbjct: 353 ---KVADSELAGPVAKFLTNLTSPLIEA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A 
Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++
Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578


>gi|262371676|ref|ZP_06064955.1| aspartyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262311701|gb|EEY92786.1| aspartyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 593

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/596 (40%), Positives = 353/596 (59%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R   T NAN+++GQIE+ A++IE+L+ +E  P P+  E     E
Sbjct: 63  KARSEFVLKITGRVRRRYEGTENANMVSGQIEVLAKEIEVLAASETPPFPLNDENTNISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLD+RR  +   +  R+++ N +R       F++  TPILT ++PEGARD+LV
Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYFEDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F E    N   + F R+ Y DA+R Y +DKPD+R P+ + +V
Sbjct: 242 FMSDDDIMDLMEGLTVKMFNELL--NVKFDKFERMTYADAMRDYASDKPDMRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   + A+   G G   R+  D   ++    G  GLAYI  
Sbjct: 300 ADLMQDVEFKVFAGP-AKDPKGRIVALRVPGAGSLPRSAIDEYTKFVGIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              E G      P+ K +  +  + ++ R+  ++GD  FF   D  K  + A  A R  I
Sbjct: 359 NELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFF-GADKAKIVNDAMGALRVKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +L +  C  +   W++DFP +E  ++ K     H+PFT+P+  +E +K N   ++ + 
Sbjct: 417 GHDLNLATCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEEVKSNPGAAL-SV 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R +  E+    F  +GI +E  E +F  L  A + G PPHGG+A
Sbjct: 474 AYDMVLNGTEIGGGSLRIYTLEMQKAIFEALGIGEEEAEEKFSFLLNALRYGAPPHGGLA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PK
Sbjct: 534 FGLDRLIMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589


>gi|289434799|ref|YP_003464671.1| hypothetical protein lse_1434 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171043|emb|CBH27585.1| aspS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 591

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/594 (40%), Positives = 342/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+++     IA
Sbjct: 4   RTSYCGELNETHIGQNVILHGWVQKRRDLGGLIFIDLRDREGIIQVVFNPETSKEALAIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +RS   IN  + TG+IE+SA++I IL+ ++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGKVSARSENAINEKLATGKIEISAEEITILNTSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I    E++L  V +E  N  T+   F R+ Y +A+ R+G+DKPD+R  + + NV
Sbjct: 243 FLTKEEIQTITEDMLIDVVKEAKN-ITIQKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           +E     +F+VF    +V  G EV AI AKG   N  R   D +  +  + G  GLA   
Sbjct: 302 SEVVKDVDFKVFQS--AVENGGEVKAINAKGAATNFSRKDLDALGVFVANYGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E+G +   GP+AK       + +   L  +DGD   F A       +     RN +
Sbjct: 357 WLKVEAGELK--GPIAKFFQAEKAQELMAALQAEDGDLLLFAADKAEVVAASLGALRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A 
Sbjct: 415 GKELALINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  EV    F  +G + E    +FG L  A + G PPHGGIA
Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDEAASEQFGFLMEALEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+ 
Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLATVKK 588


>gi|55821936|ref|YP_140378.1| aspartyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|62287521|sp|Q5M283|SYD_STRT2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|55737921|gb|AAV61563.1| aspartyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
          Length = 583

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/593 (39%), Positives = 355/593 (59%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP   D+A  E 
Sbjct: 3   RSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENADAAVVET 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N N+ TG +EL  + +++L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGTVEAR--EQANDNLPTGAVELKVKDLKVLNTAKTTPFEIKDGVEAS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +++R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHTIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLNEQEIQDITEGLIAKVMKE-TKGVEVTLPFPRMSYDDAMNNYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VF++  +V       AI  KG     +R   D++ ++A+  G  GLA  
Sbjct: 299 LTELVKDVDFKVFAEAPAVK------AIVVKGNADKYSRKSIDKLTDFAKQFGAKGLA-- 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W     G +A  GPVAK L  +  E +   L +++ D   F+A D L+  +    A RN
Sbjct: 351 -WVKMTDGVLA--GPVAKFLTSIE-EKLTDTLQIEENDLVLFVA-DTLEIANNTLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+EL +I+   F F W++D+P +EW+EEE +   AH+PFT+P     +    DL  ++
Sbjct: 406 QIAKELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDLSKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  +    +G S+E    +FG L  A   G PPHGG
Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKDLQERMLKALGFSEESAYEQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL L +
Sbjct: 526 LALGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHV 578


>gi|55823855|ref|YP_142296.1| aspartyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|62287520|sp|Q5LXN1|SYD_STRT1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|55739840|gb|AAV63481.1| aspartyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 583

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/593 (39%), Positives = 355/593 (59%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP   D+A  E 
Sbjct: 3   RSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENADAAVVET 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N N+ TG +EL  + +++L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGTVEAR--EQANDNLPTGAVELKVEDLKVLNTAKTTPFEIKDGVEAS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +++R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHTIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLNEQEIQDITEGLIAKVMKE-TKGVEVTLPFPRMSYDDAMNNYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VF++  +V       AI  KG     +R   D++ ++A+  G  GLA  
Sbjct: 299 LTELVKDIDFKVFAEAPAVK------AIVVKGNADKYSRKSIDKLTDFAKQFGAKGLA-- 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W     G +A  GPVAK L  +  E +   L +++ D   F+A D L+  +    A RN
Sbjct: 351 -WVKMTDGVLA--GPVAKFLTSIE-EKLTDTLQIEENDLVLFVA-DTLEIANNTLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+EL +I+   F F W++D+P +EW+EEE +   AH+PFT+P     +    DL  ++
Sbjct: 406 QIAKELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDLSKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  +    +G S+E    +FG L  A   G PPHGG
Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKDLQERMLKALGFSEESAYEQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL L +
Sbjct: 526 LALGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHV 578


>gi|148989939|ref|ZP_01821222.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147924724|gb|EDK75809.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 587

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/594 (40%), Positives = 355/594 (59%), Gaps = 19/594 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G      +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRAREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++  
Sbjct: 299 LTEVVRGVDFKVFSEA----PAVKAIVVTGAADHYSRKDIDKMTEVAKQYGAKGLAWVKV 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
            +D   N    GPVAK L  +  E +   L ++D D   F+A D L+  +    A R  I
Sbjct: 355 -VDGELN----GPVAKFLTGIQ-EELTTALVLEDKDLVLFVA-DTLEVANATLGALRGRI 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A 
Sbjct: 408 AKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRAI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+
Sbjct: 528 IGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEED 581


>gi|253756534|ref|YP_003029674.1| aspartyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251818998|emb|CAZ56845.1| aspartyl-tRNA synthetase [Streptococcus suis BM407]
          Length = 583

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/594 (41%), Positives = 351/594 (59%), Gaps = 23/594 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  + L GWV R R  GG+IF+D+RD  GI Q+V NP+S   E+   
Sbjct: 3   RSMYAGRVRKEHVGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPESVEAEVMAK 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V+ R  E  N NI TG +EL    + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGTVVER--EQANDNIPTGAVELQVTSLTVLNTAKTTPFEIKDGIEAS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  +  N   R  + +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLNNFKLRAAVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V ++ + G  V+  F R+ YD A+  YG+DKPD R  +++ +
Sbjct: 240 SFLNEVEIQDIVEGLIAKVLKD-TKGIDVTLPFPRMAYDHAMNFYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+   V       AI  KG   +  R   D++ ++A+  G  GLA  
Sbjct: 299 LTELVKEVDFKVFSEAPVVK------AIVVKGAADSYSRKDIDKLTDYAKQFGAKGLA-- 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W   + G +AG  PVAK L  + TE +   L ++D D   F+A D L+  +    A RN
Sbjct: 351 -WVKVDKGELAG--PVAKFLTGI-TEKLTASLQLEDKDLVLFVA-DELEVANNTLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+E G+I+ + F F WI+D+P +EW+EEE +   AH+PFT+P          DL  ++
Sbjct: 406 RLAKEQGLIDESKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTEETAHHLDGDLAQVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  Q F  +G S E    +FG L  A   G PPHGG
Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKDMQEQMFKALGFSAEDAHEQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +A G+DR VMLL G  N+REV  FP +    D +  +PSTV+  QL EL L I 
Sbjct: 526 LAIGLDRFVMLLAGEDNIREVIAFPKNNKASDPMTQAPSTVASAQLEELALDIT 579


>gi|116628635|ref|YP_821254.1| aspartyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|122266771|sp|Q03IB4|SYD_STRTD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116101912|gb|ABJ67058.1| aspartyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|312279286|gb|ADQ63943.1| Aspartyl-tRNA synthetase, putative [Streptococcus thermophilus
           ND03]
          Length = 583

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/593 (39%), Positives = 355/593 (59%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP   D+A  E 
Sbjct: 3   RSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENTDAAVVET 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N N+ TG +EL  + +++L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGTVEAR--EQANDNLPTGAVELKVEDLKVLNTAKTTPFEIKDGVEAS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +++R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHTIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLNEQEIQDITEGLIAKVMKE-TKGVEVTLPFPRMSYDDAMNNYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VF++  +V       AI  KG     +R   D++ ++A+  G  GLA  
Sbjct: 299 LTELVKDVDFKVFAEAPAVK------AIVVKGNADKYSRKSIDKLTDFAKQFGAKGLA-- 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W     G +A  GPVAK L  +  E +   L +++ D   F+A D L+  +    A RN
Sbjct: 351 -WVKMTDGVLA--GPVAKFLTSIE-EKLTDALQIEENDLVLFVA-DTLEIANNTLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+EL +I+   F F W++D+P +EW+EEE +   AH+PFT+P     +    DL  ++
Sbjct: 406 QIAKELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDLSKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  +    +G S+E    +FG L  A   G PPHGG
Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKDLQERMLKALGFSEESAYEQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL L +
Sbjct: 526 LALGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHV 578


>gi|67922351|ref|ZP_00515863.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Crocosphaera
           watsonii WH 8501]
 gi|67855802|gb|EAM51049.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Crocosphaera
           watsonii WH 8501]
          Length = 619

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/605 (40%), Positives = 359/605 (59%), Gaps = 25/605 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH C  +  +DV   V L GWV R R HGG+IF+D+RD  GI Q+V++P      + IA
Sbjct: 23  RTHYCNHVSATDVEKTVTLFGWVDRRRDHGGVIFIDLRDRTGIVQIVSDPQRTPTSYPIA 82

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG-EREY 120
           +++R+E+V+ I G V  R  E++N  I TG++E+ A+ IE+L+ V ++LP  V   + E+
Sbjct: 83  ETLRNEYVVKIIGQVSKRPPESLNTKITTGEVEIYAESIELLNGVNKQLPFVVSSLDAEF 142

Query: 121 -PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178
             E  R KYR+LDLRRD + KN+  R  ++ ++R  +  E  F+E  TPILT S+PEGAR
Sbjct: 143 VKEETRLKYRYLDLRRDRMAKNLQLRHTVVKAIRRYLEDEQQFMEIETPILTRSTPEGAR 202

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV+ G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 203 DYLVPSRVHPGQWYALPQSPQLFKQLLMVSGCDRYYQIARCFRDEDLRADRQP-EFTQLD 261

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +++IL   E ++  +F+   N + +   F R+ Y D++ +YG D+PD R  + 
Sbjct: 262 MEMSFMSENEILELNEGLVCSIFKTVKNID-LPRPFPRLTYKDSMEKYGNDRPDTRFDLT 320

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARSQ 351
           + +V++    S F+VFS ++      +V  IP    GGN A  +        + + A   
Sbjct: 321 LVDVSDIVKDSGFKVFSGVVKNGGKVKVLPIP----GGNDAISNVQIKPGGDLFKEATEA 376

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  G+AYI  R+ E   +  +G +  +L       +  R+  + G    F AGD      
Sbjct: 377 GAKGIAYI--RVKEDNKLDTIGAIKDNLTEDKKAELLARIGAKPGYLLLFGAGDTDTVNK 434

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
             +  R  I Q + +I+ +     WI +FP +EWN +EK+++  H+PFT P         
Sbjct: 435 SLSRLRLVIGQRMNLIDPDKINLLWITEFPMFEWNADEKRLEALHHPFTAPNLA----DI 490

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +DL + +A  YDLV NG EI  G +R +  ++  + F  +G+S E   N+FG L  AF+ 
Sbjct: 491 DDLSTARAQAYDLVYNGVEIGGGSLRIYQKDIQEKVFETIGLSLEEAYNKFGFLLEAFEY 550

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR+VMLL    ++R+V  FP +Q    LL  +P++V  +QL+EL ++ 
Sbjct: 551 GTPPHGGIAYGLDRLVMLLAKEDSIRDVIAFPKTQQASCLLTEAPASVDAKQLKELEIKS 610

Query: 592 VENPK 596
              PK
Sbjct: 611 TYKPK 615


>gi|313633166|gb|EFS00050.1| aspartyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 591

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/594 (40%), Positives = 342/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+++     IA
Sbjct: 4   RTSYCGELNETHIGQNVILHGWVQKRRDLGGLIFIDLRDREGIIQVVFNPETSKEALAIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +RS   IN  + TG+IE+SA+KI IL+ ++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGKVSARSENAINEKLATGKIEISAEKITILNTSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I    E++L  V +E  N  T+   F R+ Y +A+ R+G+DKPD+R  + + NV
Sbjct: 243 FLTKEEIQAITEDMLIDVVKEAKN-VTIQKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           +E     +F+VF    +V  G EV AI AKG   N  R   D +  +  + G  GLA   
Sbjct: 302 SEVVKDVDFKVFQS--AVENGGEVKAINAKGAATNFSRKDLDALGVFVANYGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E+G +   GP+AK       + +   L  +DGD   F A       +     RN +
Sbjct: 357 WLKVEAGELK--GPIAKFFQAEKAQELMAALQAEDGDLLLFAADKAEIVAASLGALRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A 
Sbjct: 415 GKELDLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  EV    F  +G + E    +FG L  A + G PPHGGIA
Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDEAASEQFGFLMEALEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+ 
Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLVELKLATVKK 588


>gi|83814246|ref|YP_446073.1| aspartyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|97196860|sp|Q2S158|SYD_SALRD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|83755640|gb|ABC43753.1| aspartyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 629

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 247/614 (40%), Positives = 344/614 (56%), Gaps = 20/614 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACF 59
           H  RTH+CGDL   D G  V L GWV   R HGG++F+D+RD YG+TQVV +P  +   +
Sbjct: 15  HPARTHTCGDLRAEDNGEAVVLKGWVDTRRDHGGLVFVDLRDRYGLTQVVFSPQDNQTAY 74

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+A  +R E V+ + G V  R  E +N ++ TG IE+SA  + +L+ +E  P  V    E
Sbjct: 75  EVAGQLRREDVISVQGTVRPRGEEAVNPDLPTGAIEVSADDLAVLNTSETPPFVVSAHEE 134

Query: 120 YP----ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                 E +R  +R+LDLRR  L +NI  R R+  +      A +F+E  TP+L  S+PE
Sbjct: 135 RQMNTNEDLRLAHRYLDLRRPDLQENIELRHRLYQTTHRYFDAHDFLEVETPVLMKSTPE 194

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARDFLVPSR++ G FYALPQ+PQ YKQLLM  G DRY QI  CFRDED R+DR P EF 
Sbjct: 195 GARDFLVPSRLHPGRFYALPQSPQTYKQLLMVGGLDRYVQIVKCFRDEDLRADRQP-EFT 253

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           Q+D+EM+F  ++ +    E ++  +++   +  T+   F R+ YD+A+R YGTDKPDLR 
Sbjct: 254 QIDVEMTFATEEQVYELTEGLMADLWDTLED-TTLETPFPRMTYDEALRTYGTDKPDLRF 312

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQP 354
            + +H+V++ F  S FRVF  I+          +P +G  G RA  DR+ +    + G  
Sbjct: 313 DLELHDVSDCFAGSGFRVFDSIVDDGGHIVALRVPGEGDRG-RAAMDRLEDHVTDEIGAA 371

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GL Y     D SG    +   A  L      A   ++  + GD    +AG        A 
Sbjct: 372 GLIYFQLPSDGSGIEQNLSSDA--LPHEYGRAAAEQVGAEAGDLVLTLAGHSPTVFEQAG 429

Query: 415 DARNHIAQELGI---INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
             R H+ +ELG+    +     F W+ DFP  E++EE  +    H+PFT P         
Sbjct: 430 ALRLHMGEELGLRPPADEGDDAFLWVTDFPLMEYDEEAGRPVSMHHPFTAPHPDDLDRLD 489

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D   ++A  YDLV NG EI  G IR H  E  +Q F  +GI +E  ++RFG L  A + 
Sbjct: 490 EDPTQVQARAYDLVLNGNEIGGGSIRIHNHETQMQVFDVLGIDEEEAQDRFGFLLDALRY 549

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR+VMLL GA ++R+V  FP +Q+  + ++ SP  V  EQL  L LR+
Sbjct: 550 GAPPHGGIALGLDRLVMLLAGADSLRDVIAFPKTQSGKEPMVKSPDWVDPEQLETLALRL 609

Query: 592 -----VENPKKILK 600
                VE P +I +
Sbjct: 610 DLPPDVEPPARIAQ 623


>gi|154249909|ref|YP_001410734.1| aspartyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769385|sp|A7HME4|SYD_FERNB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|154153845|gb|ABS61077.1| aspartyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 576

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/603 (40%), Positives = 363/603 (60%), Gaps = 41/603 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH+CG+L  +D G  V LSGW+ R+R  GG+ F+ +RD YG TQVV NPDS  + I  
Sbjct: 2   YRTHTCGELRGTDEGKNVILSGWIERIRDLGGVKFIVLRDRYGKTQVVVNPDSPVYPIVN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++  E+V+ ++G+V  R AE I     TG+IE+ A +++ILS +E LP P +   +  E 
Sbjct: 62  NISREYVIQVEGIVRKRPAEAITPEP-TGEIEIVASELKILSKSE-LP-PFYPGDDVSEE 118

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LD+R   +  N++ R ++  + R  +   NF+E  TP LT S+PEGARDFLVP
Sbjct: 119 MRLKYRYLDIRNPKMMNNLILRHKLAFATREYLSNNNFLEVETPYLTKSTPEGARDFLVP 178

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+ +G+FYALPQ+PQ +KQ+LM SG DRYFQI  CFRDED R+DR P EF Q+D+EMSF
Sbjct: 179 SRLKKGNFYALPQSPQLFKQILMISGIDRYFQIVRCFRDEDLRADRQP-EFTQIDIEMSF 237

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V  +D++N  EN++R +++    G  +   F RI Y++A+ +YG+DKPD R  + M ++T
Sbjct: 238 VHMEDVINLAENLIRYIYKAI--GIELPEKFDRITYEEAMEKYGSDKPDRRYGMEMVDLT 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWA--IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           E F +S+F++  ++L      + +   IP      +R   D  +E+ +  G  G   + W
Sbjct: 296 EFFKNSDFKIIKEVLERGGSVKGFKANIPM-----SRKIADEYSEFVKGFGLGG---VLW 347

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E+G +      AK+L     +AI  + +M +G+  F IA         A D R  + 
Sbjct: 348 FKLENGQITST--TAKYLE-NEYKAIAEKYNMNEGE-VFIIA---------AHDNRERMN 394

Query: 422 QELG---------IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
           + LG          +  + F+  W++DFPF EW+EEE +    H+PFTMP   +E L+G 
Sbjct: 395 EALGALRLKVGKQYVKVSGFDALWVVDFPFLEWSEEEGRFVARHHPFTMPY--IEDLEGG 452

Query: 473 -DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            +L  ++A  YD+V NGFE+  G IR H  ++  + F  +G++KE  + +FG    A Q 
Sbjct: 453 VELSKVRAHAYDMVINGFEVGGGSIRIHRRDIQEKVFDIIGLTKEEAKEKFGFFLDALQY 512

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+PPHGGIA G+DR+  +  G  N+REV  FP + +   LL  +PS V+  QL ELG+ +
Sbjct: 513 GVPPHGGIAFGLDRLAAIAAGVDNIREVIAFPKTSSGTCLLTNAPSAVTQFQLDELGIAL 572

Query: 592 VEN 594
            ++
Sbjct: 573 KQS 575


>gi|30250184|ref|NP_842254.1| aspartyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|46577227|sp|Q82SQ5|SYD_NITEU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|30180979|emb|CAD86164.1| aspartyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 593

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/591 (41%), Positives = 354/591 (59%), Gaps = 11/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +   + L GWVHR R HGG+IF+D+RD  GI Q+V +PD+ A F+IA+
Sbjct: 2   RTDYCGAINTRHLDKTITLCGWVHRRRDHGGVIFIDLRDREGIVQIVCDPDNVAAFQIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+VL I G V  R   T+N  I++G+IE+    IEIL+ +   P  +  +    E+
Sbjct: 62  KIRSEFVLAITGTVRHRPEGTVNHGILSGEIEVLVNAIEILNPSLTPPFQM-DDDNLSEA 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR +YR+LDLRR  + +NI  R ++  ++R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 IRLEYRYLDLRRPVMQRNIRLRHQVTMAVRIFLDQHGFIDVETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVNAGHFFALPQSPQLFKQLLMVSGFDRYYQITRCFRDEDLRADRQP-EFTQIDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I+  ME+++R +F    +  ++ + F R+ Y DA+  YG+DKPDLR P+++  +T
Sbjct: 240 LPENEIMGMMEDMIRRLFASVLD-ISLPDPFPRLSYADAMFLYGSDKPDLRVPLVLTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +      F+VF +  +   G  V A+   GGG  +R   D   ++    G  GLAYI   
Sbjct: 299 DLMQDVPFQVF-RDAAQKAGGRVAALRVPGGGELSRKEIDEYTQFVGIYGAKGLAYIKIN 357

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
            D +  + G+  P+ K L     ++I  R   Q+GD  FF   D  K  + A  A R  I
Sbjct: 358 -DLTKGIEGLQSPILKFLPESVVQSILERTQAQNGDLVFF-GADKAKVVNDALGALRVKI 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             E  +   + ++  W++DFP +EW+EEEK+    H+PFT P  G E    +D     + 
Sbjct: 416 GHERNLA-TDSWQPLWVVDFPMFEWDEEEKRWQALHHPFTSPSQGHEDFLTSDPGKALSR 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H  ++  + F  + IS +  + +FG L  A Q G PPHGGIA
Sbjct: 475 AYDMVLNGMEIGGGSIRIHRQDIQSKVFQALNISDDEAKLKFGFLLDALQYGAPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DRIV ++ GA ++R+V  FP +Q    LL  +P  V  +QLREL +R+
Sbjct: 535 FGLDRIVAMMTGADSIRDVIAFPKTQRAQCLLTQAPGAVEEKQLRELHIRL 585


>gi|315221547|ref|ZP_07863467.1| aspartyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315189381|gb|EFU23076.1| aspartyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 580

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/593 (39%), Positives = 351/593 (59%), Gaps = 19/593 (3%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSV 65
            G +    VG  + L GWV R R  GG+IF+D+RD  GI Q+V NP   D    EIA+S+
Sbjct: 3   AGRVRSEHVGQEITLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPENVDKEVMEIAESL 62

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           RSE+V+ + G V +R+    N  + TG +EL  + + +L+ A+  P  +    E  +  R
Sbjct: 63  RSEYVIEVTGKVEART--QANDKLATGTVELHVENLTVLNTAKTTPFEIKDGIEANDDTR 120

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            +YR+LDLRR  +  N+  R ++ +S+R  +    FI+  TP LT S+PEGARD+LVPSR
Sbjct: 121 LRYRYLDLRRPEMLANLKLRAKVTHSIRNYLDELEFIDVETPFLTKSTPEGARDYLVPSR 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           VNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E SF+ 
Sbjct: 181 VNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLETSFLS 239

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ ++T+ 
Sbjct: 240 DQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKYDDAMALYGSDKPDTRFEMLLQDLTDL 298

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
               +F+VFS+     P  +   +       +R   D++ E A+  G  GLA   W    
Sbjct: 299 VKGIDFKVFSEA----PAVKAIVVKNAADSYSRKDIDKLTEQAKQYGAKGLA---WVKVA 351

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQEL 424
           SG + G  PVAK L  + ++     L ++D D   F+A D L+  + A  A R  +A+EL
Sbjct: 352 SGELNG--PVAKFLKGLTSDLTDA-LQLEDNDLVLFVA-DTLEIANAALGALRIRLAKEL 407

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G+I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A  YD+
Sbjct: 408 GLIDESKFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQADTAHELEGDLSRVRAIAYDI 467

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG+E+  G +R +  ++  + F  +G S+E   ++FG L  A   G PPHGG+A G+D
Sbjct: 468 VLNGYELGGGSLRINHKDLQERMFKALGFSEEEATDQFGFLLEAMDYGFPPHGGLAIGLD 527

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           R VMLL G +N+REV  FP +    D +  +PS V  +QL EL L++  + +K
Sbjct: 528 RFVMLLAGEENIREVIAFPKNNKASDPMTQAPSIVDAKQLEELSLQVETHEEK 580


>gi|251783487|ref|YP_002997792.1| aspartyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242392119|dbj|BAH82578.1| aspartyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 582

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/591 (39%), Positives = 353/591 (59%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++   
Sbjct: 3   RSMYAGRVREEHIGTTITLKGWVGRRRDLGGLIFIDLRDREGVMQLVINPEDVSSDVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++GLV +R  +  N  + TG +EL    + IL+ A+  P  +  + E  
Sbjct: 63  AERLRSEYVIEVEGLVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V +E + G  V+  F R+ YD A+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDIVEGMITKVMKE-TKGIDVTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+     P  +   +       +R   D++ E+A+  G  GLA   W
Sbjct: 299 LTETVKGIDFKVFSEA----PAVKAIVVKENADRYSRKDIDKLTEFAKQFGAKGLA---W 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G +A  GPVAK L  + TE +  +L + + D   F+A D L+  +    A RN I
Sbjct: 352 VKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDFVLFVA-DTLEVANNTLGALRNRI 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A 
Sbjct: 408 AKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVRAI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  E+  + F  +G + E   ++FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKEMQERMFKALGFTAEEANDQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L+I
Sbjct: 528 IGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEKQLEELSLQI 578


>gi|310657332|ref|YP_003935053.1| aspartyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308824110|emb|CBH20148.1| aspartyl-tRNA synthetase [Clostridium sticklandii]
          Length = 700

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 246/589 (41%), Positives = 345/589 (58%), Gaps = 12/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RT  C  L   D+ +   + GWV R R  GG+IFLD+RD  GI QVV    N     FE 
Sbjct: 10  RTVYCNVLREKDIDTNQIVMGWVQRRRDLGGVIFLDLRDKTGIIQVVIDAKNVSEEDFEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ I G V  R  +TIN N+ TG I++ A ++ ILS A+  P  +       
Sbjct: 70  AEGIRSEYVVAIKGRVEKRDEDTINPNLETGTIDIRATEVRILSKAKTPPFMIEDASLVK 129

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R  +R+LDLRR  + +N+  R ++I+++R  +I ++F+E  TPILT S+PEGARDFL
Sbjct: 130 EELRLTHRYLDLRRPAMLENLKMRQQVISTVRNYLIEQDFLEVETPILTKSTPEGARDFL 189

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+++G+FYALPQ+PQ YKQLLM  G D+YFQ+A CFRDED R+DR P EF QLDME+
Sbjct: 190 VPSRMDKGTFYALPQSPQIYKQLLMVGGVDKYFQVAKCFRDEDLRADRQP-EFTQLDMEL 248

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++  +E++   +  +          F R+ YD+A+  YG+DKPD R    M +
Sbjct: 249 SFVDQEDVIELLEHLFSKIGSDVLK-REFKTPFRRLTYDEAMSLYGSDKPDTRFGFEMVD 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +T+      F VFSKI   N    V AI  KGG    R   + + E A S G  G+A+I 
Sbjct: 308 LTDIAKTCSFEVFSKI--ANSTGIVKAINVKGGDSFTRTQIEELTEKAVSYGGKGMAWIA 365

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D+         + K       ++I  ++  + GD   F A             R   
Sbjct: 366 IGQDKELKSV----LTKFFKKEEMDSILDKMQAEPGDLIIFCADKESAVYKILGGLRLDA 421

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A  LG+   + FEF  + DFP  EW+EEEK+    H+PFTMP+    +L  +D   ++A 
Sbjct: 422 ADMLGLRKKDDFEFLVVTDFPLLEWSEEEKRYVAMHHPFTMPKDEDFALMESDPGLVRAK 481

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+ SG IR H  E+  + FS +G S+E  + RFG +  AF+ G PPHGG A
Sbjct: 482 SYDIVLNGVELGSGSIRIHEQELQAKMFSLLGFSEEEAKERFGFMLEAFEYGTPPHGGFA 541

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            GIDR+VMLL G+ ++REV  FP  ++   +++ SPSTVS +QL EL L
Sbjct: 542 FGIDRLVMLLTGSSSIREVIAFPKMRDGSCVMISSPSTVSDDQLSELEL 590


>gi|227824345|ref|ZP_03989177.1| aspartyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904844|gb|EEH90762.1| aspartyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 596

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/590 (39%), Positives = 358/590 (60%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           R+H CG+L   D G  V L GWV + R HGGIIF+D+RD  G+ QVV +P  D   F  A
Sbjct: 5   RSHHCGELRKQDAGKEVTLCGWVSKRRDHGGIIFIDLRDRSGLVQVVIDPAHDDKDFHKA 64

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VRSE+VL + G+V +R+ ET+N N+ TG++E+  + + IL+ A+  P  +    +  E
Sbjct: 65  ETVRSEFVLQVKGMVRNRTEETVNPNLPTGEVEVVVEGLNILNPAKTPPFYIQDGVDVDE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YR+LDLRR  + +N++ R ++   +R  M  + F+E  TP+L  S+PEGARD+LV
Sbjct: 125 NVRLRYRYLDLRRPEMQRNLILRHKVTKLVRDFMDNQGFLEIETPMLCKSTPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQ+LM +G ++YFQIA CFRDED R+DR P EF QLDMEMS
Sbjct: 185 PSRVNPGKFYALPQSPQLFKQILMVAGMEKYFQIARCFRDEDLRADRQP-EFTQLDMEMS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++DDI+   EN++  VF+  + G  +   F R+ +DDA+ +YG+DKPDLR  + + N+
Sbjct: 244 FIDEDDIMTLTENLIAYVFKN-ALGKELQVPFGRMTWDDAMDQYGSDKPDLRFGMKLVNM 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +    ++F+VF  I  +  G  V AI  KG     R   D + ++    G  GLA+I  
Sbjct: 303 NQALEGTQFKVFKDI--IEKGGLVKAINVKGYSAIPRRELDGLVDFVGIYGAKGLAWII- 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
            ++E G++    P+AK  +    + I      + GD   F+A  +PL   +     R  +
Sbjct: 360 -VNEDGSIK--SPIAKFFSEEEMKRILETGKAEKGDVLLFVADKNPLVVAAALGALRLEM 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + L +I+ +   F W++ FP +E++EEE +    H+PFT P          D   + A 
Sbjct: 417 GKRLNLIDPDKLAFTWVVKFPMFEYSEEEHRYVAMHHPFTSPCDEDVDKLLTDPGHVYAK 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H   V  + F  +G++ E  + +FG L  AF+ G PPHGG+A
Sbjct: 477 AYDMVLNGVEIGGGSIRIHDRTVQNKVFEAIGLTDEQAQEKFGFLLNAFEFGAPPHGGLA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G+DR++ML+    ++R+V  FP +Q+  D++  +P+ V  +Q+REL +R
Sbjct: 537 FGLDRLIMLMAKRPSIRDVIAFPKTQSAVDVMSQAPNIVDEKQMRELHIR 586


>gi|319746001|gb|EFV98283.1| aspartate--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 583

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/595 (40%), Positives = 360/595 (60%), Gaps = 27/595 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  GI Q+V NP+   ++    
Sbjct: 3   RSMYAGRVRSEHIGTSITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSASVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G+V +R  E  N N+ TG++EL  Q++ +L+ ++  P  +    E  
Sbjct: 63  AESLRSEFVIEVSGVVTAR--EQANDNLPTGEVELKVQELSVLNTSKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I + +E ++  V ++ + G  VS  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDIVEGMIAKVMKD-TKGLEVSLPFPRMAYDDAMNNYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+   V    +   +  K    +R   D++ E A+  G  GLA++ +
Sbjct: 299 LTEIVKEVDFKVFSEASVV----KAIVVKDKADKYSRKNIDKLTEIAKQYGAKGLAWLKY 354

Query: 362 RLDESGNVAGMGPVAKHLNIVN---TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
            +D + +    GPVAK L  +    TEA    L +++ D   F+A D L+  +    A R
Sbjct: 355 -VDNTIS----GPVAKFLTAIEGRLTEA----LQLENNDLILFVA-DSLEVANETLGALR 404

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLS 476
             IA+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+P    +  L+G DL  
Sbjct: 405 TRIAKELELIDYSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTAETVHELEG-DLAK 463

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD+V NG+E+  G +R +  +   + F  +G S E  + +FG L  A   G PPH
Sbjct: 464 VRAVAYDIVLNGYELGGGSLRINQKDTQERMFKALGFSAESAQEQFGFLLEAMDYGFPPH 523

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GG+A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L +
Sbjct: 524 GGLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEQQLEELSLTV 578


>gi|332358865|gb|EGJ36687.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 584

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/591 (39%), Positives = 349/591 (59%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G  VS  F R+ YDDA+  YG DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIEVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++  
Sbjct: 299 LTEFVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV-- 352

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              +  +    GPVAK L  + ++     L +++ D   F+A D L+  + A  A R  +
Sbjct: 353 ---KVADGELTGPVAKFLTDLTSQLTEA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A 
Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKESEQELEGDLSKVRAV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEATEQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++
Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578


>gi|319892683|ref|YP_004149558.1| Aspartyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162379|gb|ADV05922.1| Aspartyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
          Length = 588

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 243/597 (40%), Positives = 348/597 (58%), Gaps = 24/597 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +    +   V L GWVH  R  GG+IF+D+RD  G  QVV NP       E+A
Sbjct: 4   RTTYCGSVTEELLEQEVTLKGWVHNRRDLGGLIFVDVRDREGYVQVVFNPAFSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           + +RSE+V+ I G V  R  ETIN  I TGQ+E+ A+ IEI++ +E  P  +  E     
Sbjct: 64  ERIRSEYVVEITGTVTKRDDETINPKIKTGQVEVQAKSIEIINQSETPPFSINEENLNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR+ L +    R +I  S+R  +  + F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRREKLAQTFKMRHQITRSIRQFLDGDGFYDVETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D++   E +++ V  +   G  +++ F R+ Y +A+ RYGTDKPD R  + + +
Sbjct: 243 SFVEQEDVMQLGEAMVKNVLADV-KGIEMTDAFPRMTYTEAMSRYGTDKPDTRFGMELLD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           V+E     +F+VF    +V  G +V A+  +    +  R   D + E+    G  GLA++
Sbjct: 302 VSELGQIMDFKVFKG--AVESGGQVKALVVENAAADYTRKDIDGLTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+A+     +   ++     + GD   F+A             RN 
Sbjct: 360 --KVVEDGL---NGPIARFFEDAHVTKLQALTGAKAGDLVLFVADSKDVVAQSLGALRNK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI-- 477
           + +E G+I+   + F W+ D+P  E++EE ++    H+PFT P+     ++  DLL    
Sbjct: 415 LGKERGLIDPEQYNFLWVTDWPLLEYDEEARRYVAGHHPFTSPK-----VEDIDLLETAP 469

Query: 478 ---KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
              +A  YDLV NGFE+  G IR H  E+  + F  +G S E  + +FG L  AF+ G P
Sbjct: 470 EQAQAQAYDLVLNGFELGGGSIRIHDGELQQRMFKALGFSDEAAQEQFGFLLDAFKYGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PHGGIA G+DR VM+L G  N+R+   FP + +  DL+  +PS VS  QL EL LRI
Sbjct: 530 PHGGIALGLDRFVMILSGRTNLRDTIAFPKTASATDLMTDAPSPVSERQLDELSLRI 586


>gi|303245827|ref|ZP_07332109.1| aspartyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302492610|gb|EFL52478.1| aspartyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 601

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 247/595 (41%), Positives = 348/595 (58%), Gaps = 16/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R+H CG L  SDVGS V L GW    R HGG+IF+D+RD  G+TQVV  P+ +    E A
Sbjct: 15  RSHDCGALRASDVGSEVCLMGWAQFRRDHGGLIFIDLRDRGGLTQVVFCPEGSAEALERA 74

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+E+VL + G V  R     N  + TG+IE+   + ++L+ A   P P+    +  E
Sbjct: 75  HVLRTEYVLAVKGRVRPRPEGMANPGMPTGEIEVEITEFKLLNTAATPPFPIEDRIDASE 134

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  L  N++ R   + S+R  +    F+E  TP+LT S+PEGARDFLV
Sbjct: 135 LLRLKYRYLDLRRPKLAGNLILRHHAVQSIRRYLDGLGFLEVETPVLTRSTPEGARDFLV 194

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N GSFYALPQ+PQ +KQLLM SGFDRY+Q+  CFRDED R+DR P EF Q+D+EMS
Sbjct: 195 PSRINNGSFYALPQSPQLFKQLLMMSGFDRYYQVVKCFRDEDLRADRQP-EFTQVDIEMS 253

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ I+   EN++R +F+E  +   + + F R+ Y DAIR YG DKPD+R  + + +V
Sbjct: 254 FVDEEQIMGMAENMVRTMFKEAMD-IALPDVFPRMTYADAIRDYGLDKPDVRFGLKLVDV 312

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE    S+F+VF+K   V  G  V    A G   +R   D + E+ +  G  GLA+I  +
Sbjct: 313 TEVVRGSQFQVFAKAELVK-GIRV----AGGAALSRKEIDDLTEFVKIYGAKGLAWIKIK 367

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E  +     P AK L+      +     ++ GD  FF AG      +     R  + +
Sbjct: 368 EGEWQS-----PFAKFLSDEERAGLAEAFGLEVGDIVFFQAGAAEMVNTALGYLRIQLGE 422

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481
              +I    F   W+ DFP  E++ E K+    H+PFT PQ G +E L      ++ +  
Sbjct: 423 RFSLIPEGSFAPVWVTDFPLLEYDPEAKRFAAKHHPFTAPQSGHLEKLAEAPGQAL-SRA 481

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H        F+ +GI  +  E++FG L +A + G PPHGGIA 
Sbjct: 482 YDLVLNGNEIGGGSIRIHDRATQKAMFAALGIEDQEAEDKFGFLLKALEFGAPPHGGIAF 541

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR++M+L GAK++R+V  FP +Q    LL  +P+ VS  QLRELG+++    K
Sbjct: 542 GLDRLIMILAGAKSIRDVIAFPKTQKAMCLLTDAPAGVSAGQLRELGIKLRSRDK 596


>gi|324996307|gb|EGC28215.1| aspartate--tRNA ligase [Streptococcus sanguinis SK678]
 gi|327490475|gb|EGF22257.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 584

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/591 (39%), Positives = 349/591 (59%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G  VS  F R+ YDDA+  YG DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++  
Sbjct: 299 LTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV-- 352

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              +  +    GPVAK L  + ++     L +++ D   F+A D L+  + A  A R  +
Sbjct: 353 ---KVADGELTGPVAKFLTDLTSQLTET-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A 
Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++
Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578


>gi|229918419|ref|YP_002887065.1| aspartyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|259511860|sp|C4L535|SYD_EXISA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229469848|gb|ACQ71620.1| aspartyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 590

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/598 (40%), Positives = 349/598 (58%), Gaps = 16/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH  G +  S +G  V+L GWV + R  GG+IF+D+RD  GI QVV  P++ A  ++A+
Sbjct: 4   RTHMNGRVTESLIGQEVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVVRPENEAVHQLAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122
           ++RSE+VL + G V+ R  E  N N+ TG IE+ A +I IL+ A+  P+P+  E E   E
Sbjct: 64  TIRSEYVLDVKGTVLER--ENKNPNMPTGNIEVIASEINILNAAKMTPIPIGDEAENVSE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  L +    R++  N++R  +  + F+E  TPILT S+PEGARD+LV
Sbjct: 122 DLRLKYRYLDLRRPALQETFRLRSKTSNTIRNFLTEQEFLEVETPILTKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D+E S
Sbjct: 182 PSRVHGGEFYALPQSPQLFKQLLMVAGFDRYFQIARCFRDEDLRADRQP-EFTQVDIETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++ +D++  ME+++  V E           F R+ + +A+RR+G+DKPD R  + + +V
Sbjct: 241 FMDIEDLMAMMESMMGQVMESTLGRTDTPAKFERMTHAEAMRRFGSDKPDTRFGLELIDV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
            +    + F+VF   L  N   +V AI  KG   N  R   D++ E+    G  GLA++ 
Sbjct: 301 ADAVKGAGFKVFDAALESNG--QVKAINVKGEADNFSRKDIDKLQEFTAVYGAKGLAWL- 357

Query: 361 WRLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                     G+ GP+AK  +    + +    + + GD   F+A  P          R  
Sbjct: 358 -----KVTAEGLNGPIAKFFDETYAQKLIEATNAEAGDLLLFVASKPTVVADSLGALRVK 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  ELG+I+ + F F W+ DFP   + EE+ +    H+PFTMP      L   D  S++A
Sbjct: 413 LGHELGLIDESKFNFLWVTDFPLVTFEEEDGRFYANHHPFTMPNREDLHLLETDPASVRA 472

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+E+  G  R +  ++  + F  +G ++E    +FG L  AF+ G PPH GI
Sbjct: 473 VAYDLVLNGYELGGGSQRIYERDIQERMFKLLGFTQEEAVEQFGFLLEAFEYGTPPHAGI 532

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VM+L G  N+R+   FP + +   LL  +PS V+  QL EL +R     KK
Sbjct: 533 ALGLDRLVMILAGRSNLRDTIAFPKTASASCLLTQAPSPVADAQLEELSIRTAIKEKK 590


>gi|315924153|ref|ZP_07920379.1| aspartate--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622555|gb|EFV02510.1| aspartate--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 593

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/595 (38%), Positives = 355/595 (59%), Gaps = 13/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61
           +R+  CGD+  +  G  V+L+GW    R  GG+IF+D+RD  GI Q+V N + A   F I
Sbjct: 6   FRSAVCGDIDANKNGQAVKLAGWADSRRDLGGVIFVDLRDRSGIVQLVINEEDAGADFAI 65

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VRSE+VL I+G V  R AE +N  + TGQ+E+   ++ IL  +   P+ V  + +  
Sbjct: 66  AEKVRSEYVLNIEGTVRKREAENVNPKMATGQMEVLVSRLTILDTSATPPIYVEDDDKSG 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLR+    K ++ R R  + +R  +  E F E  TPIL  ++PEGARDFL
Sbjct: 126 ENVRLKYRYLDLRKPKNQKILMTRARAASIVRDYLNHEGFCEIETPILGKTTPEGARDFL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV +G+F+ LPQ+PQ +KQ+LM SG DRY+QIA CFRDED R DR P EF Q+DMEM
Sbjct: 186 VPSRVQKGNFFGLPQSPQLFKQILMISGMDRYYQIAKCFRDEDLRQDRQP-EFTQIDMEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV +DDI+  ME ++  VF+E   G  +   F R+ + +A+ R+G+DKPD+R  + +HN
Sbjct: 245 SFVTKDDIMPIMEGMIAQVFKEI-RGVELERPFPRMTWQEAMDRFGSDKPDMRFGMELHN 303

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +++    S+F+VFS   ++  G  V A+ AK   G  ++     + ++A+     GLA+I
Sbjct: 304 LSDILKDSDFKVFSD--AIQRGGSVRAVIAKDAQGKLSKKTLKNLEKFAKIYKAKGLAWI 361

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                +  +     P+ K ++    EAI   +  ++GD  F +A      C+     R  
Sbjct: 362 -----DVKDEGQKSPILKFISEEEKEAIYKEMGAENGDYIFMVADTDQIVCTALGQLRLE 416

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ LG    + F+F W++DFP  E++ E+ +    H+PFT P      L       +++
Sbjct: 417 LAKRLGFDLSDQFKFLWVIDFPLLEYDAEQGRYVAVHHPFTAPLDEDIPLLDTAPEKVRS 476

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H  ++  + F  + +++E V+ +FG L  A + G PPHGG+
Sbjct: 477 DAYDMVVNGVELGGGSIRIHNGDIQDKMFKALNLNEETVQTQFGFLMEALKYGTPPHGGL 536

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G DR++M+LL   N+R+V  FP +QN  DL+  +P+  S++QL +LG+ + ++
Sbjct: 537 AFGFDRLIMMLLDLDNIRDVIAFPKTQNHSDLMTEAPAQASLDQLIDLGISVDDD 591


>gi|46446018|ref|YP_007383.1| aspartyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|62287567|sp|Q6ME91|SYD_PARUW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|46399659|emb|CAF23108.1| probable aspartate-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 599

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/594 (40%), Positives = 354/594 (59%), Gaps = 19/594 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           R+H+CG L    V S V LSGWV+R R HGG+IF+D+RD +G+TQ+V +P         A
Sbjct: 10  RSHTCGQLRKEKVNSQVTLSGWVNRRRDHGGLIFIDLRDRFGLTQLVFDPIKSPTAHLAA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           + +RSEWV+ + G V+ R     N  + TG+IE+   +++ILS ++  P  V  +  E  
Sbjct: 70  EKLRSEWVISVKGTVIPRQEGMTNPKLPTGEIEIMVHEMDILSKSKTPPFSVSDDLIEVN 129

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LD+RR  + K ++ R + + ++R  +  + F+E STPIL  S+PEGARD+L
Sbjct: 130 EELRLKYRYLDIRRGDVAKKLITRHQAMLAVRNYLNNQGFLEISTPILGKSTPEGARDYL 189

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  G+FYALPQ+PQ +KQLLM SG DRYFQIA CFRDED R+DR P EF Q+DMEM
Sbjct: 190 VPSRVYPGNFYALPQSPQIFKQLLMISGMDRYFQIAQCFRDEDLRADRQP-EFTQIDMEM 248

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF   +D++N +E++++ VF+  SN + V   F R+ +   +  YG D+PDLR  + +HN
Sbjct: 249 SFGTPEDLMNIVEDLIKTVFKTCSNID-VPTPFKRLSHAICMEEYGCDRPDLRFGMKLHN 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +      + F VF   +  N   + + I  KGG   +R   D   E+    G  GLA+I 
Sbjct: 308 LNHLAAQTTFSVFLDQIRENGLVKGFCI--KGGADFSRKTIDEYTEFVGRLGVKGLAWI- 364

Query: 361 WRLDESG---NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
            +  E+G   ++    P + H  ++        ++M+ GD  F IA  P K        R
Sbjct: 365 -KRQENGLNSSIVKFFPESIHQQLIE------EMEMEVGDIIFMIANTPSKTNQALDHLR 417

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IA++  +++ + +EF W+ DFP + WNEEEK++   H+PFT P      L   + L +
Sbjct: 418 RKIARDRNLVDPHHYEFLWVTDFPLFSWNEEEKRLQSEHHPFTSPHLEDLHLMETNPLKM 477

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           ++  YD+V NG+EI  G  R H S++  + F  +  S E +E +FG    A   G PPH 
Sbjct: 478 RSSGYDIVLNGYEIGGGSQRIHNSDLQQKIFERLKFSPEELETKFGFFLEALNYGTPPHL 537

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DRI+M+L   +N+R+V  FP +Q   DL++  PS V+ EQL+EL +R+
Sbjct: 538 GIALGLDRIIMILTQTENIRDVIAFPKTQKASDLMIECPSPVANEQLKELEIRV 591


>gi|307299322|ref|ZP_07579123.1| aspartyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915118|gb|EFN45504.1| aspartyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 588

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 228/582 (39%), Positives = 346/582 (59%), Gaps = 15/582 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEI 61
           + RTH+CG+L  SD G+ V L+GWV R+R  GGI F+ +RD YG TQVV +P D+  + +
Sbjct: 2   KKRTHTCGELRASDTGTVVTLNGWVDRIRDLGGIKFVQVRDRYGFTQVVFDPQDNELYNM 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  + +E+ + + G V  R  + IN  + TG+IE+ A ++ ILS AE  P+ +  + E  
Sbjct: 62  ALKLGNEFCISVTGSVRKRPDDAINLRLPTGEIEIVASEMGILSDAEVPPIYINIDEESA 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +  +YR+LDLRR  + +NI+ R R + ++R  +    F++  TPIL  S+PEGARDFL
Sbjct: 122 EEMHLRYRYLDLRRPKMQRNILTRHRFVQAVREYLNNNGFVDVETPILGKSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 182 VPSRLKAGKFYALPQSPQIFKQLLMVAGFDRYYQIAKCFRDEDFRADRQP-EFTQIDLEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF +++D+ +  E +++  FE+ ++ + +S  F R  Y + +  YG+DKPD R  + +H+
Sbjct: 241 SFADEEDVFSMTEGLMKYAFEKAASAD-ISTPFRRFTYQEVVEFYGSDKPDTRYGMKIHD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T  F  + F+V S  +      + + +  K    +R   D    +A+  G  GL ++  
Sbjct: 300 ITSIFEKTAFKVISDSIDKGEKVKGFIVENKADRFSRKKLDEYTAFAKESGLGGLMWL-- 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTE--AIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  V G G  +  L     E  ++       + D   F  G+ L         RN 
Sbjct: 358 ------KVEGDGLKSSILKHCPEELSSLVSLFAANENDLILFSLGEGLPLSKALGQMRNK 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIK 478
           I +E    +   FEF W+ DFP + +NEEE++I+  H+PFTMP    +E    +D L ++
Sbjct: 412 IIKEEE-FSVEGFEFLWVTDFPMFSYNEEEQRIEAEHHPFTMPDLEDLEKYGESDPLKVR 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG+EIASG +R H  ++  + F  +G+S+E    +FG L  AF+ G PPH G
Sbjct: 471 SKAYDLVLNGYEIASGSVRIHRRDIQSRVFDLIGLSREEATEKFGYLLEAFKYGPPPHAG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
           IA G+DRI+ +++GA+++REV  FP   +  DL+  +PS VS
Sbjct: 531 IAPGLDRIIAIIVGAQSIREVIAFPKVASGADLMTSAPSEVS 572


>gi|258645315|ref|ZP_05732784.1| aspartate--tRNA ligase [Dialister invisus DSM 15470]
 gi|260402664|gb|EEW96211.1| aspartate--tRNA ligase [Dialister invisus DSM 15470]
          Length = 600

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/600 (40%), Positives = 364/600 (60%), Gaps = 12/600 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEI 61
           +R+  CG +   D G  + L+GWV+  R HGG+IF+D+RD  GI QVV +P      F  
Sbjct: 8   HRSCGCGRVTEKDCGKELTLAGWVNTRRDHGGLIFIDLRDRSGIVQVVMSPQYGEDAFHK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VRSE+VL I G+V  RS ET+N  + TG+IE+   ++ +L+ A+  P  V    +  
Sbjct: 68  AEDVRSEYVLAIRGIVRERSPETVNPKMQTGKIEVVVSEMRVLNKAKTPPFYVEDGIDVD 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R K+R++DLRR  + +N++ R +I++ MR  + A +F+E  TPILT S+PEGARD+L
Sbjct: 128 ETVRLKHRYIDLRRPEMQRNLIMRHKIVHEMRQFLDAHDFLEVETPILTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ +KQLLM SG +RYFQIA CFRDED R+DR P EF QLD+E+
Sbjct: 188 VPSRVNPGKFYALPQSPQLFKQLLMVSGLERYFQIARCFRDEDLRADRQP-EFTQLDIEL 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF +QD IL+ ME++++ +F+   N + +   F RI +DDA+  YG+DKPDLR  +  ++
Sbjct: 247 SFEDQDFILDLMEHMMQRIFKNVLNVD-IQIPFKRITWDDAMNLYGSDKPDLRFDMHFYD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +++    + F+VF  +L  + G  V AI  KG     R   D + ++  + G  GLA+I 
Sbjct: 306 ISDLLRDTGFKVFRNVL--DNGGIVKAITVKGDAAIPRRELDGLVDYVGNYGAKGLAWI- 362

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             L++ G++     + K L       I    + ++GD    IA  P        + R  +
Sbjct: 363 -GLNKDGSLKCQ--ITKFLGEDKIREIGKFCEAENGDLILIIADKPKVVAQALGELRLEM 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ + +I+ N F F W+ DFP +E++EE+K+    H+PFT P+         D   + A 
Sbjct: 420 ARRMNLIDENEFCFRWVTDFPMFEYSEEDKRWVAEHHPFTAPRDEDVQYLLTDPSKVYAK 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E   G +R +  E+  + F  +GI+ E  + +FG L  AF+ G PPH GIA
Sbjct: 480 AYDMVLNGVEAGGGSLRIYQEELQEKVFKAIGITHEEAQEKFGFLLDAFRYGAPPHAGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKKIL 599
            G+DR+VML+L   ++R+V  FP +Q+  D +  +PS V   QL+EL +R+ V+  K +L
Sbjct: 540 LGLDRLVMLMLRLGSIRDVIAFPKTQSAIDQMTQAPSEVVDMQLKELHIRVDVKKEKNLL 599


>gi|146319795|ref|YP_001199507.1| aspartyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146321990|ref|YP_001201701.1| aspartyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253752776|ref|YP_003025917.1| aspartyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253754601|ref|YP_003027742.1| aspartyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|166225435|sp|A4W4L2|SYD_STRS2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225436|sp|A4VYB8|SYD_STRSY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145690601|gb|ABP91107.1| Aspartyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145692796|gb|ABP93301.1| Aspartyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251817065|emb|CAZ52717.1| aspartyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251820847|emb|CAR47613.1| aspartyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|319759194|gb|ADV71136.1| aspartyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 583

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/594 (41%), Positives = 351/594 (59%), Gaps = 23/594 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  + L GWV R R  GG+IF+D+RD  GI Q+V NP+S   E+   
Sbjct: 3   RSMYAGRVRKEHVGQEITLKGWVGRRRGLGGLIFIDLRDREGIMQLVINPESVEAEVMAK 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V+ R  E  N NI TG +EL    + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGTVVER--EQANDNIPTGAVELQVTSLTVLNTAKTTPFEIKDGIEAS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  +  N   R  + +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLNNFKLRAAVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V ++ + G  V+  F R+ YD A+  YG+DKPD R  +++ +
Sbjct: 240 SFLNEVEIQDIVEGLIAKVLKD-TKGIDVTLPFPRMAYDHAMNFYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+   V       AI  KG   +  R   D++ ++A+  G  GLA  
Sbjct: 299 LTELVKEVDFKVFSEAPVVK------AIVVKGAADSYSRKDIDKLTDYAKQFGAKGLA-- 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W   + G +AG  PVAK L  + TE +   L ++D D   F+A D L+  +    A RN
Sbjct: 351 -WVKVDKGELAG--PVAKFLTGI-TEKLTASLQLEDKDLVLFVA-DELEVANNTLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+E G+I+ + F F WI+D+P +EW+EEE +   AH+PFT+P          DL  ++
Sbjct: 406 RLAKEQGLIDESKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTEETAHHLDGDLAQVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  Q F  +G S E    +FG L  A   G PPHGG
Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKDMQEQMFKALGFSAEDAHEQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +A G+DR VMLL G  N+REV  FP +    D +  +PSTV+  QL EL L I 
Sbjct: 526 LAIGLDRFVMLLAGEDNIREVIAFPKNNKASDPMTQAPSTVASAQLEELALDIT 579


>gi|146295716|ref|YP_001179487.1| aspartyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145409292|gb|ABP66296.1| aspartyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 595

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/591 (40%), Positives = 347/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG++ + DVG  V L+GWV   R  GGIIF+D+RD  GI QVV +        E A
Sbjct: 9   RTKYCGEVSLEDVGKEVILTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELMEKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+RSE+ + I G+V  R  +T+N  I TG++E+ A+++ I S +E  P P+       E
Sbjct: 69  DSLRSEYCIGIRGIVEKRPPDTVNPKIKTGEVEVRAKELRIFSKSETPPFPIEEGINVNE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + +N++ R ++   +R  +    FIE  TP+LT S+PEGARD+LV
Sbjct: 129 AVRLKYRYLDLRRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQ +KQLLM +GFD+YFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 189 PSRIFPGKFFALPQSPQLFKQLLMVAGFDKYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ DD++   E +L+ +F E   G  +     R+ Y +A+ R+GTDKPD R  + + N+
Sbjct: 248 FVDVDDVIEINERLLQTIFREML-GIDLKLPLPRLTYKEAMERFGTDKPDTRFGMELVNL 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           T+   H EF+VF+   + N G  V AI AKG     +R   D + E+A++ G  GLA+I 
Sbjct: 307 TDIVKHCEFKVFAD--AANKGGSVRAINAKGCAVKFSRREIDALVEYAKNFGAKGLAWIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D         P+ K L       I  RLD Q GD   F A           + R  I
Sbjct: 365 VESD-----GLKSPIVKFLKEEEINEILKRLDAQVGDLLLFSADKDEVVFDVLGNVRLEI 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ L +++ + F   W+ +FP +E++EEE +    H+PFT P          D   +++ 
Sbjct: 420 ARRLNLLDKSKFNLLWVTEFPLFEYSEEEGRYVAKHHPFTSPMDEDIEFLETDPARVRSK 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H +E+  + F  +G ++E  ++RFG L  AF+ G PPHGGIA
Sbjct: 480 AYDIVLNGTEIGGGSIRIHSTELQKRMFKALGFTEERAQDRFGFLLEAFKYGTPPHGGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G DR+ MLLLG  ++R+   FP  ++    L  +PS V  +QLREL +++
Sbjct: 540 YGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590


>gi|89094833|ref|ZP_01167766.1| aspartyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89080888|gb|EAR60127.1| aspartyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 586

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/594 (40%), Positives = 361/594 (60%), Gaps = 12/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGDL    +G  + L GWVHR R HGG+IFLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDLRKEHIGEDITLCGWVHRRRDHGGVIFLDVRDREGLAQVVFDPDREESFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+V+ I G V +R   T+N  + TG+IE+  +++ IL+ AE  P  +   +   E 
Sbjct: 62  SCRNEFVVEIKGTVRNRPEGTVNPEMPTGEIEVLGKELVILNKAETPPFQLDEHQNVGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R ++R++DLRR  + + +  R+++ N++R  +    F++  TPIL  ++PEGARD+LVP
Sbjct: 122 VRLRHRYIDLRRPEMQEKMRFRSKVTNAIRNYLDDNGFLDIETPILNRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRVHEGQFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ I+   EN++R +F E  + +    +F R+ Y +A++RYG+DKPDLR P+ + +V 
Sbjct: 241 MDEEGIMALTENMIRKLFLEMKDVDL--GDFPRMPYSEAMQRYGSDKPDLRYPMELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF+   + +P   V A+   GG    R   D   ++    G  GLA+I   
Sbjct: 299 DLMAEIEFKVFAGPAN-DPKSRVTALKVPGGAQLTRKNIDDYTKFVSIYGAKGLAWIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
             E+G      P+ K L    T AI  RL  ++GD  FF A D  K  S A  A R  + 
Sbjct: 358 EIENGVNGLQSPIIKFLGDDVTMAIMERLGAENGDIVFFGA-DKAKIVSEALGALRIKVG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +  C  +   W++DFP +E  E +  +   H+PFT P    + LK N L ++ +  
Sbjct: 417 EDLNMAQCE-WAPLWVVDFPMFE--ETDAGLTALHHPFTAPSCTADELKANPLEAL-SRA 472

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G +R H  E+  +    +GIS E  E++FG L  A Q G PPHGG+A 
Sbjct: 473 YDMVLNGCELGGGSVRIHDQEMQAKVLEILGISDEEAEDKFGFLLNALQFGAPPHGGLAF 532

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR++ML+ G +++REV  FP +Q+   ++  +P  VS  QLREL +++ + P
Sbjct: 533 GLDRLIMLMTGTESIREVIAFPKTQSASCMMTEAPGEVSAAQLRELNIKLRKTP 586


>gi|256959283|ref|ZP_05563454.1| aspartyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300860591|ref|ZP_07106678.1| aspartate--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|256949779|gb|EEU66411.1| aspartyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300849630|gb|EFK77380.1| aspartate--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|315034525|gb|EFT46457.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0027]
          Length = 589

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/592 (40%), Positives = 351/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+ +   +EIA
Sbjct: 4   RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    +
Sbjct: 64  DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    EN+L  V +E + G  +S  F R+CYD+A+ RYG+DKPD R  + + +V
Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMCYDEAMARYGSDKPDTRFAMELIDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            E     +F+VF   L  N G+ V A+ AKG     +R   D + ++    G  GLA++ 
Sbjct: 302 AEVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK L  V+ E I    + + GD   F A  P    +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+    +    D  S+ A 
Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA
Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|218291279|ref|ZP_03495255.1| aspartyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218238827|gb|EED06039.1| aspartyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 600

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/594 (40%), Positives = 350/594 (58%), Gaps = 14/594 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58
           R+RTH   D       S VRL+GWV R R  G ++F+D+RD  GI Q+V +         
Sbjct: 11  RWRTHWVADTVRVQPKSEVRLAGWVQRRRDLGSVVFVDLRDRTGIVQLVFDRARGTSDEA 70

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E+A  +RSE+V+ +DG V  R  +T+N  I TG+IE+      I S A+  P  +    
Sbjct: 71  MEVADRLRSEYVIVVDGTVEKRDPDTVNPKIETGEIEVVVTSARIESAAKTPPFYIEDGI 130

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E +R +YR+LDLRR  + +    R + I + R  +    F+E  TP+LT S+PEGAR
Sbjct: 131 QVEEPVRLRYRYLDLRRPEMQRIFALRHQAIRAFRRYLDDHGFLEIETPMLTKSTPEGAR 190

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR+  G FYALPQ+PQ +KQLLM +GF+RY+Q+A CFRDED R+DR P EF QLD
Sbjct: 191 DYLVPSRLQPGEFYALPQSPQIFKQLLMVAGFERYYQVARCFRDEDLRADRQP-EFTQLD 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +D++++ ME+++  VF+E + G  V   FLR+ Y +A+ +YG+DKPDLR  + 
Sbjct: 250 IETSFLPKDELMSMMEDMMASVFKEVA-GIEVPRPFLRLPYQEAMDKYGSDKPDLRFGME 308

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357
           M ++ + F  + FRVF+ +L    G  + A+ A G    +R   D +  + +  G  GLA
Sbjct: 309 MADLADLFEGTSFRVFADVL--EKGGVIKALVAPGCASYSRKQTDDLVAFVKPYGLGGLA 366

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+   + E G  +    +AK     +   I  R   + GD     AG            R
Sbjct: 367 YV--AVQEDGFKSS---IAKFFTDDDFRRIADRAGAKVGDLVLIGAGPRETVLPAMGALR 421

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            H+ QELG+I+ + + F W+ DFP   W+EEEK+    H+PFTMP+     L   D   +
Sbjct: 422 LHLGQELGLIDESQYRFLWVTDFPLLSWDEEEKRWVAEHHPFTMPREEDIPLLDTDPGRV 481

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+EI  G +R +  +V  + F+ +G S E  + +FG L  AF+ G PPHG
Sbjct: 482 RAQAYDMVLNGYEIGGGSMRIYRRDVQEKMFAALGFSPEEAQEKFGFLLNAFEYGTPPHG 541

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DRI+MLL GAK++R+V  FP + +  DL++G+PS VS  QL  L LR+
Sbjct: 542 GIAFGLDRIIMLLTGAKSLRDVIAFPKTASGTDLMVGAPSEVSEAQLEVLHLRV 595


>gi|210632325|ref|ZP_03297292.1| hypothetical protein COLSTE_01186 [Collinsella stercoris DSM 13279]
 gi|210159641|gb|EEA90612.1| hypothetical protein COLSTE_01186 [Collinsella stercoris DSM 13279]
          Length = 584

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/590 (39%), Positives = 346/590 (58%), Gaps = 13/590 (2%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIA 62
           T +CG+L   +VG  V L+GWV R R HGG+IF D+RD  GITQ+  +P   D   F+IA
Sbjct: 3   TRTCGELRAENVGEEVTLTGWVSRRRDHGGLIFCDLRDREGITQINFDPEHSDGDAFKIA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++R EW + + G+V  R  + +N  + TG+IE+     ++L+ ++  P  +    E  E
Sbjct: 63  ETMRPEWPILVHGVVRDRGHDAVNPKLATGEIEVLVDHAQVLNRSKTPPFQIEDGIETAE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R +YR+LDLRR  +   +  R+    ++R  +    F E  TP L  S+PEGARDF+V
Sbjct: 123 DTRLRYRYLDLRRPEMAARLRLRSDFTFAIRSALHDRAFTEVETPALFKSTPEGARDFVV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G+FYALPQ+PQ  KQLLM  G +RY+Q+A CFRDED R+DR P EF Q+D+EMS
Sbjct: 183 PSRLQPGNFYALPQSPQLLKQLLMVGGVERYYQVAKCFRDEDLRADRQP-EFTQVDIEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDD+++ +E+VL   F     G  +     RI Y DA+  YG+DKPD R  + + ++
Sbjct: 242 FVEQDDVMSQLEDVLSDAFARV--GVEMPTPLRRISYWDAMDTYGSDKPDTRYGMELVDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+ F  S F+VF+   +   G+ V AI AKG G   RA  D++ + A + G  GLA+I +
Sbjct: 300 TDVFASSAFKVFASAANTQ-GHVVKAINAKGAGTWPRAQIDKLAKVAATFGAKGLAWIAF 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R D S N     P+ K       + +R R D++ GD   F AG   +        R+H+A
Sbjct: 359 REDGSMN----SPIVKFFTDEEMDELRRRCDVEPGDLVMFAAGPRRESDEILGGMRSHMA 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             L +      +F W++DFP + W+E+ ++ +  H PFT+P      L   D L + +  
Sbjct: 415 DALNVPR-EGHDFLWVVDFPLFHWDEDGQRYEAEHQPFTLPHLDELHLLDEDPLKMGSCT 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD V +GFE   GG+R H +E+ L+    +G ++E    +FG L  A + G PP GG A 
Sbjct: 474 YDFVMDGFEAGGGGMRIHDAELQLKMLEFMGFTEERARAQFGFLMEALEFGAPPMGGFAL 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+ MLL G  ++R+V  FP + +  DL+  +PS VS+ QL+E+GLR+
Sbjct: 534 GLDRVCMLLAGTDSIRDVMAFPKTSSGSDLMSAAPSKVSLAQLKEVGLRL 583


>gi|327458419|gb|EGF04775.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327471754|gb|EGF17195.1| aspartate--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 584

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/591 (40%), Positives = 349/591 (59%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G  VS  F R+ YDDA+  YG DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA   W
Sbjct: 299 LTELVKGVDFKVFSEA----PVVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G +AG  PVAK L  + ++     L +++ D   F+A D L+  + A  A R  +
Sbjct: 352 VKVAEGELAG--PVAKFLTDLTSQLTEA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A 
Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++
Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSLVSVAQLEELSLQV 578


>gi|125719049|ref|YP_001036182.1| aspartyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125498966|gb|ABN45632.1| Aspartyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 584

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 236/591 (39%), Positives = 349/591 (59%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMST 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+VL + G V +R  E  N  + TG +EL  + + IL+ A+  P  +    E  
Sbjct: 63  AESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVENLAILNTAKTTPFEIKDGIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEILENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVHKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G  VS  F R+ YDDA+  YG DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA   W
Sbjct: 299 LTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G +AG  P+AK L  + ++     L +++ D   F+A D L+  + A  A R  +
Sbjct: 352 MKVADGELAG--PIAKFLTDLTSQLTEA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A 
Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERIFKALGFSAQEATEQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++
Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578


>gi|324991803|gb|EGC23728.1| aspartate--tRNA ligase [Streptococcus sanguinis SK405]
          Length = 584

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/591 (40%), Positives = 349/591 (59%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G  VS  F R+ YDDA+  YG DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA   W
Sbjct: 299 LTELVKGVDFKVFSEA----PVVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G +AG  PVAK L  + ++     L +++ D   F+A D L+  + A  A R  +
Sbjct: 352 VKVAEGELAG--PVAKFLTDLTSQLTEA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A 
Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++
Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578


>gi|262380200|ref|ZP_06073355.1| aspartyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|262298394|gb|EEY86308.1| aspartyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 594

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 247/598 (41%), Positives = 356/598 (59%), Gaps = 17/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R A T NAN+I+GQIE+  ++IE+L+ +E  P P+  E     E
Sbjct: 63  KARSEYVLKITGRVRRRYAGTENANMISGQIEVLGKEIEVLAQSETPPFPLNDENTNISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLD+RR  +   +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDENGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E        + F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FMSDDDIMDLMEGMTVKMFDELL--GIKFDKFQRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   + A+   G G   R+  D   ++    G  GLAYI  
Sbjct: 300 ADLMQDVEFKVFAGP-AKDPKGRIVALRVPGAGSLPRSAIDEYTKFVGIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              E G      P+ K +  +  + ++ R+  ++GD  FF   D  K  + A  A R  I
Sbjct: 359 NELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFF-GADKAKVVNDAMGALRVKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478
             +L +  C  +   W++DFP +E  ++ K     H+PFT+P+  +E +K N  + LS+ 
Sbjct: 417 GHDLNLATCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEEVKNNPGEALSV- 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG EI  G +R +  E+    F  +GI++E  E +F  L  A + G PPHGG
Sbjct: 474 --AYDMVLNGTEIGGGSLRIYTLEMQKAIFEALGINEEEAEEKFSFLLNALRYGAPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G+DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PK
Sbjct: 532 LAFGLDRLVMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589


>gi|150021495|ref|YP_001306849.1| aspartyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|166225440|sp|A6LNG3|SYD_THEM4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|149794016|gb|ABR31464.1| aspartyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 581

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/591 (40%), Positives = 357/591 (60%), Gaps = 26/591 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH+CG+L   DV   V LSGWV R+R  GGI F+ +RD YG TQ+V NP+S  +EI++
Sbjct: 2   YRTHNCGELRKKDVEKEVILSGWVDRIRDLGGIKFIILRDRYGKTQLVVNPNSPAYEISQ 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +  EWV+ + G V+ R  ET    ++TG+IE+   KI++LS ++ +P P +      E 
Sbjct: 62  ELGREWVIQVYGKVLERPDET-KTEMVTGEIEVEVNKIKVLSKSD-VP-PFYPGENVSED 118

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR++DLR + + KN++ R ++  + R  +   +F+E  TP LT S+PEGARDFLVP
Sbjct: 119 LRLKYRYIDLRDERMQKNLIIRHKMAQAAREFLNKHDFLEVETPYLTKSTPEGARDFLVP 178

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+ +G FYALPQ+PQ +KQ+LM SGFDRY+Q A CFRDED R+DR P EF Q+D+EMSF
Sbjct: 179 SRLQKGKFYALPQSPQLFKQILMVSGFDRYYQFARCFRDEDLRADRQP-EFTQIDIEMSF 237

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+ D+IL+ ME+  R VF +   G  +   F R+ Y++A+  YG+DKPD R  + + + T
Sbjct: 238 VKMDEILDLMESFARFVFGKV--GIKLPEKFDRLSYEEAMELYGSDKPDRRYGMQLQDFT 295

Query: 304 EHFVHSEFRVFSKILSVNPGYE--VWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            +FV++EF+V   +L  +   +  +  IP      +R    +  E+ +  G  GL  +++
Sbjct: 296 NYFVNTEFKVIKNVLERSGSVKGFITTIPI-----SRKIASQFEEFVKQYGLGGL--LWF 348

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
           +LD+      + P AK L     + ++   ++  G      A +  +  + A  A R  +
Sbjct: 349 KLDDE----IVSPTAKFLKESYKKIVK-EYNLDKGSVVLLAAHENREILNTALGALRLKV 403

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +E        F+  WI+DFPF EWNEEE + +  H+PFTMP+   + L+      IKA+
Sbjct: 404 GKEYFNELEKVFDALWIVDFPFLEWNEEESRFEARHHPFTMPKNLEQKLE-----DIKAY 458

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD++ NG EI  G IR H SEV  + F  +G+++E    +FG    A + G+PPHGGIA
Sbjct: 459 AYDMILNGMEIGGGSIRIHDSEVQKRVFEIIGLTEEEANEKFGFFISALKYGVPPHGGIA 518

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G DR+V +     ++R+V  FP + +    L G+PSTV  +QL+EL ++I
Sbjct: 519 FGFDRMVSIAANVASIRDVIAFPKTSSGICQLTGAPSTVEEKQLKELSIQI 569


>gi|332686837|ref|YP_004456611.1| aspartyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332370846|dbj|BAK21802.1| aspartyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 588

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/593 (40%), Positives = 350/593 (59%), Gaps = 14/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CGD+    +   + L GWV + R  GG+IF+D+RD  GI QVV NP   +  FEIA
Sbjct: 3   RTIYCGDVTEKYLDKEIILKGWVQKRRDLGGLIFIDLRDREGIIQVVFNPKFSTTAFEIA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ I G V+ R A  IN  + T ++E+ A  + IL+ A   P+ +    +  +
Sbjct: 63  NKCRSEYVIEITGKVVYREANAINPKMKTDKVEVVATSVTILNEAITTPILIDDNEKVND 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + KNI  R ++  ++R  +    FI+  TP L  SSPEGARD+LV
Sbjct: 123 ELRLKYRYLDLRRPKMTKNIKLRHQVTKAIRNYLDDNAFIDIETPYLAKSSPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQ+PQ +KQLLM +GFDRY+Q+  CFRDED R DR P EF Q+D+E +
Sbjct: 183 PSRIHAGHFYALPQSPQIFKQLLMGAGFDRYYQLVRCFRDEDLRGDRQP-EFTQVDIETT 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E + G  V+  F RI YD+A+ R+G+DKPD R  + + ++
Sbjct: 242 FLTAEEIQTMTEEMIERVMKE-TKGIEVTLPFPRISYDEAMARFGSDKPDTRFGMELIDI 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            +     +F+VF  +L    G +V A+ AKG     +R   D +   A   G  GLA++ 
Sbjct: 301 IDIAQKIDFKVFKSVLE--NGGQVKALNAKGAASKYSRKDLDHLAHDAEQYGAKGLAWV- 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK L  V+ E I+ ++  Q GD   F+A  P    +     R+  
Sbjct: 358 -KVEEDG---LKGPIAKFLMDVSDELIQ-KMSAQTGDLLIFVADTPNVVAATLGAMRSRF 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W++D+P +E++EE+ +   AH+PFT PQ        ND   + A 
Sbjct: 413 GRELEMIDESAFNFLWVVDWPLFEYSEEQDRYIAAHHPFTQPQAQDIQWLLNDPEKVYAE 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  E+  + F  +G + EV E +FG L  A   G PPHGGIA
Sbjct: 473 AYDIVLNGYELGGGSLRIYQRELQEKMFEALGFTNEVAEEQFGYLLEALTYGFPPHGGIA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR VMLL G +N+REV  FP +    D +  +PS VS EQL EL L +++
Sbjct: 533 LGLDRFVMLLAGEENIREVIAFPKNSKAADPMTNAPSLVSNEQLVELNLEVID 585


>gi|86606337|ref|YP_475100.1| aspartyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|97196955|sp|Q2JTZ2|SYD_SYNJA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|86554879|gb|ABC99837.1| aspartyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 601

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 248/596 (41%), Positives = 356/596 (59%), Gaps = 26/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+  CG +  + +G  V L GW+ R R HGG+IFLD+RD  GI Q+VA+P      +E+A
Sbjct: 10  RSLYCGQVRPAHIGQTVTLYGWIDRRRDHGGVIFLDLRDRSGIVQLVADPQKTPLSYELA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119
             VRSE+V+ + G V  R +++ N  + TG++E+ A+++EILS V ++LP  V      E
Sbjct: 70  GQVRSEYVVRVTGTVHQRPSDSFNPRLATGEVEVYAEELEILSRVGKQLPFSVSGEEGEE 129

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA--ENFIECSTPILTASSPEGA 177
             E IR +YR+LDLRR+ L +N+  R ++I ++R R +   E FIE  TPILT S+PEGA
Sbjct: 130 VREEIRLRYRYLDLRRERLSRNLQLRHQVIKAIR-RFLEDEEGFIEVETPILTRSTPEGA 188

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRVN G ++ALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QL
Sbjct: 189 RDYLVPSRVNPGEWFALPQSPQLFKQLLMVAGVDRYYQIARCFRDEDLRADRQP-EFTQL 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF++Q+ IL   E +L  +F+    G  +   F R+ Y +A+ RYG+DKPD R  +
Sbjct: 248 DMEMSFMDQEAILELNERLLCHIFKTV-KGIDLPRPFPRLTYAEAMARYGSDKPDTRFGL 306

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN------EWARSQ 351
            + +V+  F  S F+VF+K L      +V  +P   GG  +    R+       +     
Sbjct: 307 ELVDVSPLFQGSGFKVFAKALQEGGVIKVLPVP---GGDEKISNTRIKPGGDLFKLVTQY 363

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLA+I  R    G++  +G + + L+    + +    + + GD   F AG       
Sbjct: 364 GAGGLAFIRVR---PGSLDTIGALKESLSPEQEQQLLQLTNAKPGDLLLFGAGPAAVVNE 420

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
                R H+ QELG+I  N     WI DFP +E+N EE +++  H+PFT P     +   
Sbjct: 421 SLGRLRLHLGQELGLIPENALNLLWITDFPLFEFNAEENRLEALHHPFTAPHPDDLA--- 477

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            DL + +A  YDLV NG E+  G +R +  E+  Q F  +G++ E   ++FG L  AF+ 
Sbjct: 478 -DLKTARAQAYDLVWNGVEVGGGSLRIYQREIQEQVFQTIGLTPEQARDKFGFLLEAFEY 536

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           G PPHGGIA G+DR+VMLL G  ++R+V  FP +Q    LL G+PS V  +QL+EL
Sbjct: 537 GTPPHGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQARCLLTGAPSGVEAKQLKEL 592


>gi|228475157|ref|ZP_04059883.1| aspartate--tRNA ligase [Staphylococcus hominis SK119]
 gi|314936257|ref|ZP_07843604.1| aspartate--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|228270768|gb|EEK12170.1| aspartate--tRNA ligase [Staphylococcus hominis SK119]
 gi|313654876|gb|EFS18621.1| aspartate--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 588

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/592 (40%), Positives = 349/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +G  V L GWVH  R  GG+IF+D+RD  GI Q+V NPD       IA
Sbjct: 4   RTTYCGLVTEELLGQKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSKEALSIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
           ++VRSE+V+ ++G V  R  ET+N  I TGQ+E+    I I++ +   P  +  E +   
Sbjct: 64  ETVRSEYVVEVEGSVTKRDPETVNPKIKTGQVEVQVSHIHIINKSATPPFSINEENQSVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRPELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+DI+   E +L  V ++   G  +   F R+ YD+A++RYG+DKPD R  + + +
Sbjct: 243 SFVDQEDIIQMGEEMLSKVVKDV-KGIDIQTPFPRMTYDEAMKRYGSDKPDTRFGMELQD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF    +V    EV AI A+G   N  R   D + E+    G  GLA++
Sbjct: 302 VSQLGKEMDFKVFKD--TVEHDGEVKAIVAEGAADNYTRKDMDGLTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              +DE  +    GP+A+     N   ++     + GD   F+A  P          R  
Sbjct: 360 -KVVDEGLS----GPIARFFEEENVNTLKELTGAKPGDLVMFVADKPNVVAQSLGALRIK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +I+ +   F W+ D+P  E++E+ K+   AH+PFT P+    +   ++   ++A
Sbjct: 415 IAKELKLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKDEDIAKLDSEPEKVQA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR    E+  + F  +G +KE   ++FG L  AF+ G PPHGGI
Sbjct: 475 NAYDVVLNGYELGGGSIRISDGELQEKMFEVLGFTKEQARDQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +PS VS +QL EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPSEVSDKQLEELSLRI 586


>gi|332296202|ref|YP_004438125.1| aspartyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332179305|gb|AEE14994.1| aspartyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 590

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 233/591 (39%), Positives = 353/591 (59%), Gaps = 13/591 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIA 62
           YRTH+  ++  S     + + GWV++ R HG +IFLDIRD Y + QVV + ++   F  A
Sbjct: 3   YRTHTLKEINRSLENKTITVCGWVNKRRDHGNLIFLDIRDRYSLLQVVVDSENKETFRKA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP 121
           + +RSE+VL I G +  R   T N  I TG+ EL A  I IL+ ++  P  +  E ++Y 
Sbjct: 63  EEIRSEYVLQITGELRKRPLGTENTKISTGEFELVASNINILNRSKVPPFSISDEQKDYD 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +  KYR+LDLRR    +NI+KR  I N++R   +  +F+E  TP LT S+PEGARDFL
Sbjct: 123 EKLGLKYRYLDLRRTDKKENIIKRHLITNTIRNHFLENDFLEIETPYLTKSTPEGARDFL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G+FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 183 VPSRLQPGTFYALPQSPQLFKQILMVSGFDRYFQIVRCFRDEDLRADRQP-EFTQVDVEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE +D++   E + + +  +F  G        RI Y +A+ +YGTD+PDLRNP+ + +
Sbjct: 242 SFVEPNDVMTITEELFKKLNVQF--GIECDYPIKRISYTEAMNKYGTDRPDLRNPLEILD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE    ++ ++F  ++  +   + + +  K     R   +++N  A+  G PG+A+I +
Sbjct: 300 FTEILKDTKLKIFRSVIEKDGYIKGFILKNKECHPTRPTLEKINNMAKDFGLPGIAWILF 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E        P+AK L+     + +   D+ D D+    AG      +  +  R  + 
Sbjct: 360 DGSEV-----RSPIAKFLSENEISSFKKTFDLGDKDAILLAAGKDGLLEALGS-LRLFLG 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAF 480
            E  ++N + F++ W++DFP +E++E+EK+++  H+PFT P    +E L   D LS+++ 
Sbjct: 414 NEFNLVNESEFKYLWVVDFPLFEYDEKEKRLNSVHHPFTAPHPEDLEKL-DTDPLSVRSL 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR + + +  + F  + IS E  + +FG L  A + G PPHGGIA
Sbjct: 473 AYDIVLNGNELGGGSIRINNTNLQSKIFKLLDISPEEAQIKFGFLLEALEYGAPPHGGIA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DRI ML  GAK++R+V  FP +Q+   LL  +PS V  +QL EL + +
Sbjct: 533 LGLDRITMLFTGAKSLRDVIAFPKTQSGTCLLTDAPSQVDRKQLDELSISV 583


>gi|288906391|ref|YP_003431613.1| aspartyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|306832438|ref|ZP_07465591.1| aspartate--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325979405|ref|YP_004289121.1| Aspartyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288733117|emb|CBI14698.1| aspartyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|304425478|gb|EFM28597.1| aspartate--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325179333|emb|CBZ49377.1| Aspartyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 582

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/597 (40%), Positives = 354/597 (59%), Gaps = 25/597 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           RT   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    ++   
Sbjct: 3   RTMYAGRVRSEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSSDVMTT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+R+E+V+ + G V  R  E  N N+ TG +EL    + +L+ A+  P  +  + E  
Sbjct: 63  AESLRNEFVIEVTGEVAQREQE--NKNLPTGAVELKVSALTVLNTAKTTPFEIKDDVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  +  N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DENRLRYRYLDLRRPKMLNNFKLRAKVTHSIRNYLDELEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+DME 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDMET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   DI +  E ++  V ++ + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSDQDIQDITEGMIAKVMKD-TKGIDVTLPFPRMSYDDAMNNYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+   V       AI  KG     +R   D++ E+A+  G  GLA++
Sbjct: 299 LTEVVKDVDFKVFSQAPVVK------AIVVKGNADKYSRKNIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            +      + A  GPVAK L  +  + +   L +++ D   F+A D L+  +    A R 
Sbjct: 353 KF-----TDGAITGPVAKFLTSIE-DKLTASLQLEENDLVLFVA-DTLEVANNTLGALRT 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSI 477
            IA+EL +++ + F F W++D+P +EW+EEE +   AH+PFT+P +     L+G DL  +
Sbjct: 406 RIAKELDMVDNSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEESAHELEG-DLAKV 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  E+  + F  +G + E   ++FG L  A   G PPHG
Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQKELQERMFKALGFTAEEANDQFGFLLEAMNYGFPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L I  N
Sbjct: 525 GLAIGLDRFVMLLAGEDNIREVIAFPKNNKAADPMTQAPSLVSDKQLDELALAIENN 581


>gi|16079809|ref|NP_390633.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310693|ref|ZP_03592540.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221315017|ref|ZP_03596822.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221319938|ref|ZP_03601232.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324219|ref|ZP_03605513.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|3122885|sp|O32038|SYD_BACSU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2635219|emb|CAB14714.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 592

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 245/598 (40%), Positives = 354/598 (59%), Gaps = 16/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ CGD+    +G  V L GWV + R  GG+IF+D+RD  GI QVV NPD +     IA
Sbjct: 4   RTYYCGDITEKAIGESVTLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKEALAIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP 121
           + +R+E+VL I G V++R   T+N N+ TG IE+ A  + +L+ A+  P  +  +  E  
Sbjct: 64  EGIRNEYVLDIQGKVVAREEGTVNPNLKTGAIEIHADGVNVLNAAKTPPFAISDQAEEVS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R K+R+LDLRR  + + +  R  +  ++R  +    F++  TPILT S+PEGARD+L
Sbjct: 124 EDVRLKHRYLDLRRPAMFQTMQLRHNVTKAVRSFLDENGFLDIETPILTGSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMVSGIERYYQIARCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI++  E ++  V  E + G  +     R+ YD+A+ +YG+DKPD R  +++ +
Sbjct: 243 SFMSQEDIMSLAEEMMAKVMRE-TKGEELQLPLPRMTYDEAMNKYGSDKPDTRFDMLLTD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           V++    +EF+VFS   +V  G  V AI  KGG G+  R   D +  +A + G  GLA  
Sbjct: 302 VSDIVKDTEFKVFSS--AVANGGVVKAINVKGGAGDYSRKDIDALGAFAANYGAKGLA-- 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W   E+  V   GP+AK  +      +   LD  +GD   F A D  +  + +  A R 
Sbjct: 358 -WVKVEADGVK--GPIAKFFDEEKQSKLIEALDAAEGDLLLFGA-DQFEVVAASLGALRL 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +E G+I+   F F W++D+P  E + EE +   AH+PFTMP      L       +K
Sbjct: 414 KLGKERGLIDEKLFNFLWVIDWPLLEHDPEEGRFYAAHHPFTMPVREDLELIETAPEDMK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+  G IR    ++  + F+ +G S E    +FG L  AF+ G PPHGG
Sbjct: 474 AQAYDLVLNGYELGGGSIRIFEKDIQEKMFALLGFSPEEAAEQFGFLLEAFEYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR+VMLL G  N+R+   FP + +   L+  +P  VS  QL EL L I +  K
Sbjct: 534 IALGLDRLVMLLAGRTNLRDTIAFPKTASASCLMTEAPGEVSDAQLDELHLSIKKKVK 591


>gi|294651458|ref|ZP_06728771.1| aspartate--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822608|gb|EFF81498.1| aspartate--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 592

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 246/599 (41%), Positives = 356/599 (59%), Gaps = 17/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   FE A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFETAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R A T NAN+++GQIE+  ++IE+L+ +E  P P+  E     E
Sbjct: 63  KARSEFVLKITGRVRRRYAGTENANMVSGQIEVLGKEIEVLAASETPPFPLNDENTNISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLD+RR  + + +  R+++ N +R       F++  TPILT ++PEGARD+LV
Sbjct: 123 EIRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYFEDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E    N   + F R+ Y DA+R Y +DKPD+R P+ + +V
Sbjct: 242 FMSDDDIMDLMEGLTVKMFDELL--NVKFDKFERMTYADAMRDYASDKPDMRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   + A+   G G   R+  D   ++    G  GLAYI  
Sbjct: 300 ADLMQDVEFKVFAGP-AKDPKGRIVALRVPGAGSLPRSAIDEYTKFVGIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              E G      P+ K +  +  + ++ R+  ++GD  FF   D  K  + A  A R  I
Sbjct: 359 NELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFF-GADKAKVVNDAMGALRVKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478
             +L +     +   W++DFP +E  ++ K     H+PFT+P+  +E +K N  + LS+ 
Sbjct: 417 GHDLNLATKE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEEVKNNPGEALSV- 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG EI  G +R +  E+    F  +GI +E  E +F  L  A + G PPHGG
Sbjct: 474 --AYDMVLNGTEIGGGSLRIYTLEMQKAIFEALGIGEEEAEEKFSFLLNALRYGAPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DR++ML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E  KK
Sbjct: 532 LAFGLDRLIMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQAKK 590


>gi|322412865|gb|EFY03773.1| aspartyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 582

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/593 (39%), Positives = 354/593 (59%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++   
Sbjct: 3   RSMYAGRVREEHIGTTITLKGWVGRRRDLGGLIFIDLRDREGVMQLVINPEDVSSDVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++GLV +R  +  N  + TG +EL    + IL+ A+  P  +  + E  
Sbjct: 63  AERLRSEYVIEVEGLVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V +E + G  V+  F R+ YD A+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKE-TKGIDVTLPFPRLSYDVAMNSYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +T      +F+VFS+  +V       AI  KG     +R   D++ E+A+  G  GLA  
Sbjct: 299 LTATVKGIDFKVFSEATAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W     G +A  GPVAK L  + TE +  +L + + D   F+A D L+  +    A RN
Sbjct: 351 -WVKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++
Sbjct: 406 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVQ 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E+    F  +G + E   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKEMQELMFKALGFTAEEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L+I
Sbjct: 526 LAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSPVSEKQLEELSLQI 578


>gi|327467319|gb|EGF12819.1| aspartate--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 584

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 233/591 (39%), Positives = 350/591 (59%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVRKGHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMST 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+VL + G V +R  E +N  + TG +EL  + + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEYVLEVTGKVAAR--EQVNDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRIHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G  VS  F R+ YDDA+  YG DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIEVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++  
Sbjct: 299 LTDLVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV-- 352

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              +  +    GPVAK L  + T  +   L +++ D   F+A D L+  + A  A R  +
Sbjct: 353 ---KVADSELAGPVAKFLTNL-TSPLTEALQLENNDLILFVA-DTLEVANAALGALRVRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A 
Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++
Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578


>gi|262371057|ref|ZP_06064379.1| aspartyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262313943|gb|EEY94988.1| aspartyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 594

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/596 (40%), Positives = 354/596 (59%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDETVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
            VRSE+VL I G V  R A T NAN+++GQIE+  ++IE+L+ +E  P P+  +     E
Sbjct: 63  KVRSEFVLKITGRVRRRYAGTENANMVSGQIEVLGKEIEVLAASETPPFPLNDDNTNISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLD+RR  +   +  R+++ N +R       F++  TPILT ++PEGARD+LV
Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKLTNLIRNYFEDNGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E    +   + F R+ Y DA+R Y +DKPDLR P+ + +V
Sbjct: 242 FMSDDDIMDLMETLTVKMFKELL--DVQFDKFPRMTYTDAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   + A+   G G   R+  D   ++    G  GLAYI  
Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIVALRVPGAGSLPRSQIDEYTKFVGIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              E G      P+ K +  +  + ++ R+  ++GD  FF   D  K  + A  A R  +
Sbjct: 359 NELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFF-GADKAKVVNDAMGALRIKV 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +L +  C  +   W++DFP +E  ++ K     H+PFT+P+  +E +K N   ++ + 
Sbjct: 417 GHDLKMSTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEDVKNNPGAAL-SV 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H  E+    F  +GI +E  E +F  L  A + G PPHGG+A
Sbjct: 474 AYDMVLNGTEIGGGSLRIHNLEMQKAIFEALGIGEEEAEEKFSFLLNALRYGAPPHGGLA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VML+ G  ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PK
Sbjct: 534 FGLDRLVMLMTGGASIRDVIAFPKTKTAECPLTQAPAPVESNQLRDLGIRLREKPK 589


>gi|223932851|ref|ZP_03624847.1| aspartyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|330833744|ref|YP_004402569.1| aspartyl-tRNA synthetase [Streptococcus suis ST3]
 gi|223898432|gb|EEF64797.1| aspartyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|329307967|gb|AEB82383.1| aspartyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 583

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 243/594 (40%), Positives = 351/594 (59%), Gaps = 23/594 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  + L GWV R R  GG+IF+D+RD  GI Q+V NP+S   E+   
Sbjct: 3   RSMYAGRVRKEHVGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPESVEAEVMAK 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V+ R  E  N NI TG +EL    + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGTVVER--EQANDNIPTGAVELQVTSLTVLNTAKTTPFEIKDGIEAS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  +  N   R  + +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLNNFKLRAAVTHSIRNYLDELEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V ++ + G  V+  F R+ YD A+  YG+DKPD R  +++ +
Sbjct: 240 SFLNEVEIQDIVEGLIAKVLKD-TKGIDVTLPFPRMAYDHAMNFYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VFS+   V       AI  KG     +R   D++ ++A+  G  GLA  
Sbjct: 299 LTELVKEVDFKVFSEAPVVK------AIVVKGAADCYSRKDIDKLTDYAKQFGAKGLA-- 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W   + G +AG  PVAK L  + TE +   L ++D D   F+A D L+  +    A RN
Sbjct: 351 -WVKVDKGELAG--PVAKFLTGI-TENLTASLQLEDKDLVLFVA-DELEVANNTLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+E G+I+ + F F WI+D+P +EW+EEE +   AH+PFT+P          DL  ++
Sbjct: 406 RLAKEQGLIDESKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTEETAHHLDGDLAQVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G S E    +FG L  A   G PPHGG
Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKDMQERMFKALGFSAEDAHEQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +A G+DR VMLL G  N+REV  FP +    D +  +PSTV+  QL EL L I 
Sbjct: 526 LAIGLDRFVMLLAGEDNIREVIAFPKNNKASDPMTQAPSTVASAQLEELALNIT 579


>gi|254417175|ref|ZP_05030920.1| aspartyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196175981|gb|EDX71000.1| aspartyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 602

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/610 (40%), Positives = 357/610 (58%), Gaps = 31/610 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG+L  + VG  V L GWV R R HGG+IFLD+RD  GI Q+V++P      +  A
Sbjct: 2   RTHYCGELRSNHVGETVTLCGWVDRRRDHGGVIFLDLRDRTGIVQIVSDPQRTPDSYPNA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119
           ++VR+E+V+ I G V  R  +++N N+ TG++E+ A +I  L +V ++LP  V       
Sbjct: 62  EAVRNEYVVQITGRVSRRPDDSLNPNLSTGEVEVYADQITPLNTVRKQLPFQVSTADAEA 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGAR 178
             E +R KYR+LD+RRD + +NI  R  +I ++R  +  E +FIE  TP+LT S+PEGAR
Sbjct: 122 VREDLRLKYRYLDIRRDRMRQNIELRHEVIKAIRRYLEDEQHFIEVETPMLTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G +YALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGQWYALPQSPQLFKQLLMVAGLDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ QD+IL   E ++  +F+    G  +   F R  Y + + RYGTDKPD R  + 
Sbjct: 241 MEMSFMSQDEILQLNEGLVCHIFKTV-KGIDIPRPFPRFTYAEVMERYGTDKPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V+E    S F+VFS  ++     +V  IP    GGN    D+++      G+ G  +
Sbjct: 300 LVDVSELLKDSGFKVFSGAVAAGGKVKVLPIP----GGN----DKISNVRIKPGKSGDLF 351

Query: 359 -----------IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407
                       + R+ ++  +  +G +  +L+    + +      + G    F AGD  
Sbjct: 352 NEAAAAGAKGLAYIRVRDNWEIDTIGAIKDNLSEEQKQKLLEITGAKPGHLLLFGAGDTD 411

Query: 408 KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
                    R  + QELG+IN       W+ D+P +EWN +EK+++  H+PFT P     
Sbjct: 412 VVNKTLDRLRQVLGQELGLINPTKINLLWVTDYPMFEWNADEKRLEAIHHPFTAPHPD-- 469

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
               +DL + +A  YDLV NG+E+  G +R +  ++  + F  +G+S E  +N+FG L  
Sbjct: 470 --DIDDLKTARAQAYDLVYNGYEVGGGSLRMYQPDIQRRVFEAIGLSPEEAQNKFGFLLE 527

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF  G PPHGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +P+ V  +QL+EL
Sbjct: 528 AFDYGAPPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQASCLLTEAPAQVGEKQLKEL 587

Query: 588 GLRIVENPKK 597
            +     PKK
Sbjct: 588 HVASTYKPKK 597


>gi|172058095|ref|YP_001814555.1| aspartyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|229559870|sp|B1YJF7|SYD_EXIS2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|171990616|gb|ACB61538.1| aspartyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 588

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 243/595 (40%), Positives = 352/595 (59%), Gaps = 25/595 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH  G +    +G  V+L GWV + R  GG+IFLD+RD  GI QVV  P++     +A+
Sbjct: 4   RTHMNGTVTEETIGQAVQLKGWVQKRRDLGGLIFLDLRDRTGIVQVVFQPENEQAHRLAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-E 122
           S+RSE+VL I G V+ R  E  N NI TGQ+E+ A ++ IL+ ++  P P+  E E   E
Sbjct: 64  SIRSEYVLDIKGTVVQR--ENPNPNIPTGQVEVVADEVIILNASKMTPFPISEEAEQTSE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR +L +    R++  N MR  +  ++F+E  TPILT S+PEGARD+LV
Sbjct: 122 DLRLKYRYLDLRRPSLQETFRLRSKASNIMRNFLDEQDFLEVETPILTKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SGF+RYFQIA CFRDED R+DR P EF Q+D+E S
Sbjct: 182 PSRVHPGEFYALPQSPQLFKQLLMVSGFERYFQIARCFRDEDLRADRQP-EFTQVDIETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++ +D+   ME+++  V +E + G  ++  F R+ Y +A+ R+G+DKPD R  + + +V
Sbjct: 241 FMDVEDLYAMMESMMTRVMKE-TLGKDITTPFPRMPYAEAMSRFGSDKPDTRFGLELIDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            E    + F+VF   +++  G EV A+  KG     +R   D++ E+    G  GLA++ 
Sbjct: 300 AEAVTGAGFKVFD--MALESGGEVKALNVKGAADQFSRKDIDKLQEFTAIYGAKGLAWVK 357

Query: 361 WRLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA--- 416
              D      G+ GP+AK  +   T  +      + GD   F+A       S  AD+   
Sbjct: 358 VTAD------GLNGPIAKFFDEAATARLVEATTAEAGDLLVFVAAK----ASIVADSLGA 407

Query: 417 -RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  + +ELG+I+   F F W+ DFP   + E + +    H+PFTMP+         D  
Sbjct: 408 LRQKLGKELGLIDETVFNFLWVTDFPLVTFEEADSRFYANHHPFTMPRREDLDKLETDPG 467

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           S+ A  YDLV NG+E+  G  R +  ++  + F  +G ++E    +FG L  AF+ G PP
Sbjct: 468 SVLAVAYDLVLNGYELGGGSQRIYERDIQERMFKLLGFTEEEANEQFGFLMEAFEYGTPP 527

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           H GIA G+DR++MLL G  N+R+   FP + +  DLL  +PS VS  QL EL +R
Sbjct: 528 HAGIALGLDRLIMLLAGRTNLRDTIAFPKTASASDLLTAAPSPVSDAQLNELSIR 582


>gi|302387916|ref|YP_003823738.1| aspartyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302198544|gb|ADL06115.1| aspartyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 640

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 233/591 (39%), Positives = 358/591 (60%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           R+H C ++   +VGS V + GWV + R  GGIIF+D+RD  GI Q++   +N  +  F  
Sbjct: 54  RSHRCTEVTKDNVGSEVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEESNCGAESFAK 113

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ + G V SR+   +N N+ TG+IE+ A+ + ILS +E  P P+    +  
Sbjct: 114 AEKLRSEFVIAVAGEVESRAG-GVNENLATGEIEVRAKSLRILSESETPPFPIEENSKTK 172

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  + +NI  R+++    R  +  E F+E  TP L  S+PEGARD+L
Sbjct: 173 EELRLKYRYLDLRRPDIQRNIRVRSQVATLTRAFLAEEGFLEIETPTLIKSTPEGARDYL 232

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ GSFYALPQ+PQ YKQLLM SG+DRYFQ+A C+RDED R+DR P EF Q+DME+
Sbjct: 233 VPSRVHPGSFYALPQSPQLYKQLLMCSGYDRYFQLARCYRDEDLRADRQP-EFTQIDMEL 291

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ +D+L   E +L+ +F+E  N + +     R+ + +A+ R+G+DKPD+R  + + N
Sbjct: 292 SFVDVEDVLEVNERLLKKLFKEICNLD-IELPLTRMTWREAMDRFGSDKPDMRFGMELKN 350

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V++    +EF VF   L    G  V  I A+G G   R   D + E+A+  G  GLAY+ 
Sbjct: 351 VSQVVKDTEFAVFKSAL--ENGGSVRGINAEGQGAMPRKKIDALVEYAKGFGAKGLAYL- 407

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             ++E G        AK +       +   +  + GD   F A           + R  +
Sbjct: 408 -AVNEDGTYK--CSFAKFMTEEELHTLAEAMGAKPGDLLLFAADRDKVVFDVLGNLRLEL 464

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L ++  + F+F W+ +FP  E++EE+ +    H+PFTMP     +L   D  +++A 
Sbjct: 465 ARQLDLLKKDHFKFLWVTEFPLLEYSEEQGRFTAMHHPFTMPMDEDWALIDRDPGAVRAK 524

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H S++  + F  +G +KE  +++FG L  AF+ G+PPH G+A
Sbjct: 525 AYDIVLNGTELGGGSVRIHQSDIQSKMFEVLGFTKEQAKDQFGFLLDAFKYGVPPHAGLA 584

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VML++GA ++R+V  FP  ++   L+  +P+ V  +QL ELG+ I
Sbjct: 585 YGLDRVVMLMVGADSIRDVIAFPKVKDASCLMTEAPAQVDTKQLVELGIEI 635


>gi|294507994|ref|YP_003572052.1| Aspartyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294344322|emb|CBH25100.1| Aspartyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 629

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 246/614 (40%), Positives = 343/614 (55%), Gaps = 20/614 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACF 59
           H  RTH+CGDL   D G  V L GWV   R HGG++F+D+RD YG+TQVV +P  +   +
Sbjct: 15  HPARTHTCGDLRAEDNGEAVVLKGWVDTRRDHGGLVFVDLRDRYGLTQVVFSPQDNQTAY 74

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+A  +R E V+ + G V  R  E +N ++ TG IE+SA  + +L+ +E  P  V    E
Sbjct: 75  EVAGQLRREDVISVQGTVRPRGEEAVNPDLPTGAIEVSADDLAVLNTSETPPFVVSAHEE 134

Query: 120 YP----ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                 E +R  +R+LDLRR  L +NI  R R+  +      A +F+E  TP+L  S+PE
Sbjct: 135 RQMNTNEDLRLAHRYLDLRRPDLQENIELRHRLYQTTHRYFDAHDFLEVETPVLMKSTPE 194

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARDFLVPSR++ G FYALPQ+PQ YKQLLM  G DRY QI  CFRDED R+DR P EF 
Sbjct: 195 GARDFLVPSRLHPGRFYALPQSPQTYKQLLMVGGLDRYVQIVKCFRDEDLRADRQP-EFT 253

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           Q+D+EM+F  ++ +    E ++  +++   +  T+   F R+ YD+A+R YGTDKPDLR 
Sbjct: 254 QIDVEMTFATEEQVYELTEGLMADLWDTLED-TTLETPFPRMTYDEALRTYGTDKPDLRF 312

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQP 354
            + +H+V++ F  S FRVF  I+          +P +G  G RA  DR+      + G  
Sbjct: 313 DLELHDVSDCFAGSGFRVFDSIVDDGGHIVALRVPGEGDRG-RAAMDRLEAHVTDEIGAA 371

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GL Y     D SG    +   A  L      A   ++  + GD    +AG        A 
Sbjct: 372 GLIYFQLPSDGSGIEQNLSSDA--LPHEYGRAAAEQVGAEAGDLVLTLAGHSPTVFEQAG 429

Query: 415 DARNHIAQELGI---INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
             R H+ +ELG+    +     F W+ DFP  E++EE  +    H+PFT P         
Sbjct: 430 ALRLHMGEELGLRPPADEGDDAFLWVTDFPLMEYDEEAGRPVSMHHPFTAPHPDDLDRLD 489

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D   ++A  YDLV NG EI  G IR H  E  +Q F  +GI +E  ++RFG L  A + 
Sbjct: 490 EDPTQVQARAYDLVLNGNEIGGGSIRIHNHETQMQVFDVLGIDEEEAQDRFGFLLDALRY 549

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR+VMLL GA ++R+V  FP +Q+  + ++ SP  V  EQL  L LR+
Sbjct: 550 GAPPHGGIALGLDRLVMLLAGADSLRDVIAFPKTQSGKEPMVKSPDWVDPEQLETLALRL 609

Query: 592 -----VENPKKILK 600
                V+ P +I +
Sbjct: 610 DLPPDVDPPARIAQ 623


>gi|306820421|ref|ZP_07454057.1| aspartate--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551496|gb|EFM39451.1| aspartate--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 593

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/593 (40%), Positives = 353/593 (59%), Gaps = 14/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RT  CG+L + +VG  V L GWV R R  G +IF DIRD  G+ Q+V   N     F+ A
Sbjct: 9   RTAYCGELRIGNVGEDVVLMGWVQRSRDKGALIFTDIRDRSGLCQIVFDENTKEEVFKKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++ SE+V+ ++G V  RSA+  N+ + TG IE+ A  + IL+ ++  P+ +  + E  E
Sbjct: 69  ETLGSEYVIAVEGTVRERSAK--NSEMETGDIEVFATNLLILNDSQTPPIYIKDDDEVSE 126

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLR+  + +N V R ++ N++R  +    FIE  TPIL   +PEGARD+LV
Sbjct: 127 NLRLKYRYLDLRKPKMQRNFVLRQKVTNAVRNYLSESGFIEIETPILNKPTPEGARDYLV 186

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EMS
Sbjct: 187 PSRVNNGKFYALPQSPQLFKQLLMVSGFDRYFQIARCFRDEDLRADRQP-EFTQIDCEMS 245

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE +D++   E +++ +F+E  + + V    +R+ Y +A+ R+G+DKPDLR    + N+
Sbjct: 246 FVEPEDVMQMAEKMVQKIFKETLDVD-VKLPLMRMTYKEAMERFGSDKPDLRFGFEIQNL 304

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG--GGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F VF    + +P   V AI  KG     +R    ++ + A++ G  GLAYI 
Sbjct: 305 SEVVKTCGFSVFENAAN-SPKSSVRAINVKGYEDKFSRKAITKLEDVAKTYGAKGLAYIK 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E  N     P+AK ++      I  ++D  +GD   F+A             R  +
Sbjct: 364 F-TKEGIN----SPIAKFISEEKMNEILQKMDAAEGDLILFVADKDKIVFDALGHLRIEV 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++LG+I+ N ++  ++ +FP +E++EEE++    H+PFTMP      L   D   ++A 
Sbjct: 419 ARQLGLIDDNEYKLLFVTEFPQFEYDEEEQRFVAVHHPFTMPMDEDIELLDTDREKVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H S+V  + F  +G SKE    +FG L  AF+ G PPHGGIA
Sbjct: 479 AYDIVLNGVELGGGSIRIHDSKVQEKMFECLGFSKEDAWEKFGFLLEAFKYGTPPHGGIA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR VMLL    ++REV  FP +QN    L  +P+    + L ELG+++ E
Sbjct: 539 LGLDRFVMLLAKEDSIREVIAFPKNQNAICPLTSAPALADDKALAELGIKVTE 591


>gi|325695823|gb|EGD37720.1| aspartate--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 584

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 236/591 (39%), Positives = 348/591 (58%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G   S  F R+ YDDA+  YG DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIEFSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA   W
Sbjct: 299 LTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G +AG  PVAK L  + ++     L +++ D   F+A D L+  + A  A R  +
Sbjct: 352 VKVTDGELAG--PVAKFLTDLTSQLTDA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A 
Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++
Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578


>gi|255320947|ref|ZP_05362121.1| aspartyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|255302116|gb|EET81359.1| aspartyl-tRNA synthetase [Acinetobacter radioresistens SK82]
          Length = 592

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 247/599 (41%), Positives = 356/599 (59%), Gaps = 17/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R A T NAN+I+GQIE+  ++IE+L+ +E  P P+  E     E
Sbjct: 63  KARSEYVLKITGRVRRRYAGTENANMISGQIEVLGKEIEVLAQSETPPFPLNDENTNISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLD+RR  +   +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDENGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E        + F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FMSDDDIMDLMEGMTVKMFDELL--GIKFDKFQRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   + A+   G G   R+  D   ++    G  GLAYI  
Sbjct: 300 ADLMQDVEFKVFAGP-AKDPKGRIVALRVPGAGSLPRSAIDEYTKFVGIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              E G      P+ K +  +  + ++ R+  ++GD  FF   D  K  + A  A R  I
Sbjct: 359 NELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFF-GADKAKVVNDAMGALRVKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478
             +L +  C  +   W++DFP +E  ++ K     H+PFT+P+  +E +K N  + LS+ 
Sbjct: 417 GHDLNLATCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEEVKNNPGEALSVA 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG EI  G +R +  E+    F  +GI++E  E +F  L  A + G PPHGG
Sbjct: 475 ---YDMVLNGTEIGGGSLRIYTLEMQKAIFEALGINEEEAEEKFSFLLNALRYGAPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E  KK
Sbjct: 532 LAFGLDRLVMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQQKK 590


>gi|150390123|ref|YP_001320172.1| aspartyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149949985|gb|ABR48513.1| aspartyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 591

 Score =  435 bits (1119), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/595 (39%), Positives = 355/595 (59%), Gaps = 15/595 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M+  R+H  G L    +G  V L+GWV + R  GG+IF+DIRD  G++QVV + D     
Sbjct: 4   MNMKRSHMAGSLRTEHIGETVTLTGWVQKRRDLGGLIFVDIRDRSGMSQVVFDKDISQEA 63

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F  A+++ SE+V+   G V  R   ++N N+ TG++E+    +E+L+ AE  P+ +  + 
Sbjct: 64  FNQAETLGSEYVISARGKVFKR--HSVNPNMPTGEVEIFVDTLEVLNTAETTPIYIKDDD 121

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E++R KYR+LDLR+ ++ KN++ R  +   +R  +  E FIE  TP+LT  +PEGAR
Sbjct: 122 DVGENLRLKYRYLDLRKSSMQKNLMLRHTVSKIVRNFLSDEGFIEVETPMLTKPTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G F+ALPQ+PQ +KQLLM SG +RYFQI  CFRDED R+DR P EF Q+D
Sbjct: 182 DYLVPSRVNPGKFFALPQSPQLFKQLLMVSGMERYFQIVKCFRDEDLRADRQP-EFTQID 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            EMSFV+Q DI+   EN+L+ VF++  + + +   F ++ YD+A+ RYG+DKPD+R    
Sbjct: 241 CEMSFVDQQDIIEMNENLLKKVFKDALDID-IQLPFPQMPYDEAMERYGSDKPDIRFDFE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356
           + ++ E    S F+VFS  +  N G+ V AI  KG     +R     + E+ ++ G  GL
Sbjct: 300 LVDLGEIVKESGFKVFSSAIQ-NGGF-VKAINVKGYAEQFSRKDITSLEEFVKTYGAKGL 357

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A++  ++   G  +   P+AK  N   T+A+    D   GD   F+A  P          
Sbjct: 358 AWM--KVTAEGVTS---PIAKFFNEDETKALLEATDANSGDLLLFVADQPKVVYDSLGHL 412

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +A+ LG++N   F+  W+ DFP +E++EEE +    H+PFT P      L       
Sbjct: 413 RIEVAKRLGLLNKEEFKMLWVTDFPLFEYDEEENRYMAMHHPFTSPVDEDIPLLDTHPEK 472

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD+V NG+EI  G +R   SE+  + F  +G S+E    +FG L  AF+ G PPH
Sbjct: 473 VRAKAYDIVLNGYEIGGGSLRIFSSELQQKMFKTLGFSEEEAWEKFGFLLEAFKYGTPPH 532

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GGIA G+DR+VM+L   +N+R+V  FP +QN    +  +PS    +QL+EL +R+
Sbjct: 533 GGIAFGLDRLVMILAQEENIRQVIAFPKTQNAICPMTNAPSIADEKQLKELAIRV 587


>gi|298694909|gb|ADI98131.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 588

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/592 (41%), Positives = 349/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +IA
Sbjct: 4   RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +L+ V +E      ++  F R+ Y +A+RRYG+DKPD R  + + +
Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKG-VEINGAFPRMTYKEAMRRYGSDKPDTRFEMELID 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF   +  N G E+ AI AKG      R   D + E+    G  GLA++
Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+ + L   N E +      + GD   F+A  P          R  
Sbjct: 360 --KVVEDGLT---GPIGRFLETENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A
Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586


>gi|283770704|ref|ZP_06343596.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283460851|gb|EFC07941.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 588

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/592 (41%), Positives = 350/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +IA
Sbjct: 4   RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDEEGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +L+ V +E   G  ++  F R+ Y +A+RR+G+DKPD R  + + +
Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKE-VKGVEINGAFPRMTYKEAMRRFGSDKPDTRFEMELID 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF   +  N G E+ AI AKG      R   D + E+    G  GLA++
Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+ +     N E +    D + GD   F+A  P          R  
Sbjct: 360 --KVVEDGLT---GPIGRFFETENVETLLTLTDAEAGDLVMFVADKPNVVAQSLGALRVK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A
Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586


>gi|282916898|ref|ZP_06324656.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282319385|gb|EFB49737.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
          Length = 588

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/592 (40%), Positives = 349/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +IA
Sbjct: 4   RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDEEGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +L+ V +E      ++  F R+ Y +A+RR+G+DKPD R  + + +
Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKE-VKDVEINGAFPRMTYKEAMRRFGSDKPDTRFEMELID 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF   +  N G E+ AI AKG      R   D + E+    G  GLA++
Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+ +     N E +    D + GD   F+A  P          R  
Sbjct: 360 --KVVEDGLT---GPIGRFFETENVETLLTLTDAEAGDLVMFVADKPNVVAQSLGALRVK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A
Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586


>gi|88195441|ref|YP_500245.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|123098030|sp|Q2FXU5|SYD_STAA8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|87202999|gb|ABD30809.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|329728340|gb|EGG64777.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 588

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/592 (41%), Positives = 349/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +IA
Sbjct: 4   RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +L+ V +E      ++  F R+ Y +A+RRYG+DKPD R  + + +
Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKG-VEINGAFPRMTYKEAMRRYGSDKPDTRFEMELID 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF   +  N G E+ AI AKG      R   D + E+    G  GLA++
Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+ +     N E +      + GD   F+A  P          R  
Sbjct: 360 --KVVEDGLT---GPIGRFFETENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A
Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +PS VS +QL EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPSEVSDKQLEELSLRI 586


>gi|225175513|ref|ZP_03729507.1| aspartyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225168842|gb|EEG77642.1| aspartyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 590

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/598 (41%), Positives = 357/598 (59%), Gaps = 14/598 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFE 60
           ++R   CG++    VG  V L+GWV R R HG +IFLD+RD  G+ QVV N   +   F 
Sbjct: 2   QFRDIYCGEVKKEMVGQTVTLNGWVQRRRDHGKLIFLDLRDRSGLVQVVFNFEQNEEMFA 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+VL + G V++RS ETIN  + TG+IE+ A+ +EIL+ A+  P  +    + 
Sbjct: 62  RAEEIRSEFVLTVRGQVVNRSEETINPKLPTGEIEVQAESLEILNKAKTPPFYIEDGVDV 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E++R KYR+LDLRR  + ++++ R ++    R  +  E F+E  TP+LT S+PEGARD+
Sbjct: 122 DENVRLKYRYLDLRRPEMQQSMIMRHKVSKLTRDFLDGEGFLEVETPMLTRSTPEGARDY 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRVN GSFYALPQ+PQ +KQL+M SG +RYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 182 LVPSRVNPGSFYALPQSPQLFKQLMMVSGAERYFQIARCFRDEDLRADRQP-EFTQIDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF +Q+ IL  ME ++  +FE   +   +   F R+ Y +A+ RYG+DKPD R  + + 
Sbjct: 241 LSFCDQEMILGMMEGLMAHLFEGVLD-EQIPTPFPRLSYREAMERYGSDKPDTRFGMELK 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           +V+      +F+VF ++LS   G  V  I A G GG +R   D +  +    G  GLAY+
Sbjct: 300 DVSGLVSDVDFKVFKQVLS--SGGVVKGINATGCGGFSRRELDELTAFVAQYGAKGLAYM 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
           F    E G V    P+AK  +      I   +D + GD   F+A D L     A  A R 
Sbjct: 358 FV---EEGGVR--SPIAKFFSEDVLSEIVSAMDGKPGDLLLFVA-DKLDVAYHALGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           H+ + LG+I+ +   F W++DFP   W+E+EK+    H+PFT P+         +  ++ 
Sbjct: 412 HLGERLGLIDKSKRNFLWVVDFPLLFWDEDEKRYVANHHPFTAPRDEDLDKLETEAQNVL 471

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV +G EI  G +R +  E+  Q F  +G + E    +FG L  AF+ G PPHGG
Sbjct: 472 AKAYDLVLDGVEIGGGSLRIYRREIQEQMFKLLGFTPESAREQFGFLMDAFEYGTPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR+VML+ G  ++R+V  FP + +   L+  +PS V   QL+EL + +   PK
Sbjct: 532 IAFGLDRLVMLMAGKDSIRDVIAFPKTASASCLMTQAPSEVDARQLKELHIALDVPPK 589


>gi|114776360|ref|ZP_01451405.1| aspartyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114553190|gb|EAU55588.1| aspartyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 594

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/589 (39%), Positives = 349/589 (59%), Gaps = 9/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CGD  V  +G  VRL+GW    R HGG++F+D+RD  G+ Q+V +PD  A  ++A 
Sbjct: 4   RTH-CGDFRVHHIGQTVRLNGWAQTNRDHGGVVFIDVRDRSGLVQIVVHPDDPAVHQLAH 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R + V+ + G V++RS ET+NA + TG IE+ A  I +L+ +E  P  +    +  E 
Sbjct: 63  SLRQQDVIEVVGEVIARSDETVNAKLPTGAIEVKASTITVLNRSETPPFMIDDTCDTGEQ 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  +   +  R R+ ++ R  + +++F+E  TPIL  S+PEGARD+LVP
Sbjct: 123 HRLEYRYLDLRRPKMQGFMALRHRVTHAARNYLDSQSFLEIETPILNKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV  GSF+ALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF Q+D+E+SF
Sbjct: 183 SRVYPGSFFALPQSPQIFKQLLMVAGMDRYYQIARCFRDEDLRADRQP-EFTQVDIELSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V QD+++   E +LR +F+    G  +   F RI Y DA+ RYG D+PD+R  +   N+T
Sbjct: 242 VSQDEVMAVAEGLLRSMFDA-GVGIHLPETFPRITYADAMDRYGLDRPDVRFGLEHVNIT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E     EF+VF +        ++  +P  G   +R   D   ++    G  GLA+I  ++
Sbjct: 301 EMMKRVEFKVFREPADNGGLVKIMRVPG-GSALSRKQIDDYTKFVSIYGAKGLAWI--KV 357

Query: 364 DESGNVAG--MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++  ++ G    P+ K L       +      ++GD  FF AGD         + R  + 
Sbjct: 358 NDVTDLPGGLQSPIVKFLPEDVLADMLQACGAENGDLLFFGAGDEKVVNDALGNLRVKVG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            ++G++      F W++DFP + WN +EK+ +  H+PFT P         +D L++++  
Sbjct: 418 HDMGLVAAGDHRFVWVVDFPMFAWNADEKRPEALHHPFTAPYAEDLDKLESDPLNMRSQA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  EV  + F  +GIS E  +++FG L  A + G PPHGG+A 
Sbjct: 478 YDLVWNGTEIGGGSIRIHNPEVQARVFKTLGISDEEADSKFGFLVNALKYGAPPHGGLAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR++ L+ G  ++R+V  FP +Q   D +  +PS VS  Q +ELGLR
Sbjct: 538 GLDRVLSLMAGVDSIRDVIAFPKTQKAADPMSNAPSEVSDAQWKELGLR 586


>gi|228477954|ref|ZP_04062565.1| aspartyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250134|gb|EEK09387.1| aspartyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 583

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/596 (40%), Positives = 360/596 (60%), Gaps = 29/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP++A     E 
Sbjct: 3   RSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENADANVVET 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N N+ TG +EL  + +++L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGTVEAR--EQANDNLPTGAVELKVEDLKVLNTAKTTPFEIKDGVEAS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +++R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHAIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLNEQEIQDITEGLIAKVMKE-TKGIEVTLPFPRMSYDDAMNNYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +TE     +F+VF++  +V       AI  KG     +R   D++ E+A+  G  GLA++
Sbjct: 299 LTEVVKGVDFKVFAEAPAVK------AIVVKGNADKYSRKSIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
                +  + A  GPVAK L  +  + +   L +++ D   F+A D L+  +    A RN
Sbjct: 353 -----KMTDGALAGPVAKFLTSIE-DKLTDALHLEENDLVLFVA-DTLEIANNTLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+EL +I+   F F W++D+P +EW+EEE +   AH+PFT+P     +    DL  ++
Sbjct: 406 QIAKELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDLSKVR 465

Query: 479 AFQYDLVCNGFEIASGGIR-NH--MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           A  YD+V NG+E+  G +R NH  + E ML+A   +G S+E    +FG L  A   G PP
Sbjct: 466 AVAYDIVLNGYELGGGSLRINHKDLQERMLKA---LGFSEESAYEQFGFLLEAMDYGFPP 522

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG+A G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL L +
Sbjct: 523 HGGLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHV 578


>gi|237785605|ref|YP_002906310.1| aspartyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|259511854|sp|C4LIW2|SYD_CORK4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|237758517|gb|ACR17767.1| Aspartyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 597

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 251/607 (41%), Positives = 350/607 (57%), Gaps = 29/607 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           +RTH  G+L    VG  V LSGWV R R HGG+IF+D+RD  G+ QVV   DS     A 
Sbjct: 2   HRTHLAGELRSHHVGQTVTLSGWVARRRDHGGVIFIDLRDRSGLAQVVFR-DSDVAAQAH 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER---EY 120
            +RSE+ + + G+V +R   + N N+ +G IEL+  ++ IL+ +E LP  +  +    E 
Sbjct: 61  HLRSEYCIRVTGVVDARPEGSENPNLDSGAIELNVNELTILNSSEALPFQIDDQSSSGEV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR T H  +V R+ +  + R  ++  +F E  TP LT S+PEGARDF
Sbjct: 121 GEETRLKYRYLDLRRKTQHDALVLRSNVNQAARSVLLKHDFHEIETPTLTRSTPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GSFYALPQ+PQ +KQLLM  G +RYFQIA C+RDED R+DR P EF QLD+E
Sbjct: 181 LVPARLRPGSFYALPQSPQLFKQLLMVGGMERYFQIARCYRDEDFRADRQP-EFTQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD+++  E +L  +++E   G  +     R+ Y DA++ YG+DKPDLR  I + 
Sbjct: 240 MSFVDQDDVISVAEEILTAIWKEI--GYDIPTPIPRMTYADAMKYYGSDKPDLRFDIKIV 297

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
             TE F ++ FRVF      NP Y    +   G    R   D   +WA+ +G  GLAYI 
Sbjct: 298 ECTEFFANTTFRVFQ-----NP-YVGAIVMEDGASQPRRQLDAWQDWAKQRGAKGLAYIL 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + + G ++  GPVAK++     E I   +  + GD  FF AGD     +    AR  +
Sbjct: 352 --VGDDGQLS--GPVAKNITDAEREGIADHVGAKPGDCIFFAAGDAKSSRALLGAARGEV 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE---EKKIDFAHNPFTMPQGGMESLK------- 470
           A++LG+I    + F W++D P +E   +   E  +   H+ +T       S K       
Sbjct: 408 ARKLGLIKEGDWAFTWVVDAPLFEPAADATAEGDVALGHSAWTAVHHAFTSPKPECMDSF 467

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  S  ++ YD+VCNG EI  G IR H S+V  + F+ +GIS E  + +FG L  A +
Sbjct: 468 DKDPGSALSYAYDIVCNGNEIGGGSIRIHRSDVQQRVFNVMGISDEEAQEKFGFLLEAMK 527

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DRIV LL G +++R+V  FP S    D L  +P+ ++ EQ +E G  
Sbjct: 528 FGAPPHGGIAFGWDRIVSLLGGFESIRDVIAFPKSGGGVDPLTDAPAPITPEQRKESG-- 585

Query: 591 IVENPKK 597
           I   PKK
Sbjct: 586 IDAKPKK 592


>gi|302879663|ref|YP_003848227.1| aspartyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582452|gb|ADL56463.1| aspartyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 598

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/595 (40%), Positives = 353/595 (59%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG L    +   V + GW HR R HGG+IF+D+RD  G+ QVV NPD    F++A+
Sbjct: 2   RTHYCGTLNTDQLDQTVSICGWAHRRRDHGGVIFIDLRDREGLAQVVCNPDQLEMFKVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+VL I G V  R     N+N+++G+IE+  Q+IE+L+ +   P  +  E    E+
Sbjct: 62  SVRNEYVLRITGTVRRRPEGASNSNLVSGEIEILCQEIEVLNASITPPFQLDDE-NLSEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R  +R +DLRR  + KN++ R ++  + R  + +  FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTHRVIDLRRPQMQKNLMLRYKVTRAFRNFLDSRGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +  I    E ++R VF+E +    + N F R+ Y +A+ R+G+DKPDLR  + +  VT
Sbjct: 240 LNETQITALTEELIRTVFKE-ALAVDLPNPFPRMPYSEAMARFGSDKPDLRVTLELTEVT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +      F+VF+ + +   G  + A+   GG    R   D   ++    G  GLAYI   
Sbjct: 299 DVMKDVAFKVFAGVANSANG-RIAAMRVPGGAAFTRGEIDEYTKFVSIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                N  G+  P+ K+++    +++  R   Q+GD  FF   D  K  + A  A R  I
Sbjct: 358 DITQPNETGLQSPIVKNIHEAALKSVIERTGAQNGDLIFF-GADKEKIVNDALGALRCKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             E G +N N +E  W++DFP +E++EE K+ +  H+PFT P+    +L  +D     A 
Sbjct: 417 GHEKGHVNGNAWEPLWVVDFPMFEYDEEGKRWNACHHPFTAPKDEHLALLESDPGKCLAK 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDL  NG E+  G +R H +EV  Q F  + I  E  + +FG L  A Q G PPHGG+A
Sbjct: 477 AYDLALNGSELGGGSVRIHKAEVQSQVFRALNIGDEEAQLKFGFLLDALQYGAPPHGGLA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+DRIV ++ G++++R+V  FP +Q    LL  +PS V   QLR+L +R+ + P
Sbjct: 537 FGLDRIVTMMTGSESIRDVIAFPKTQRAQCLLTQAPSAVDERQLRDLHIRLRQQP 591


>gi|198282205|ref|YP_002218526.1| aspartyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218666964|ref|YP_002424570.1| aspartyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|226735097|sp|B7J3F7|SYD_ACIF2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238690898|sp|B5EJL3|SYD_ACIF5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|198246726|gb|ACH82319.1| aspartyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218519177|gb|ACK79763.1| aspartyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 596

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/592 (40%), Positives = 353/592 (59%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH C  +    +G  V L GW  R R HGG+IF+D+RD  G+ Q+VA+PD    F  A 
Sbjct: 2   RTHYCNGIHEGLIGQTVTLCGWAQRRRDHGGVIFIDLRDREGLVQIVADPDQVDAFAAAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             RSE+VL ++G++ +R A T N ++ +G++EL+A +I IL+ +E +P P+  E +  E+
Sbjct: 62  ECRSEFVLQVEGVLRARPAGTENPHMPSGKVELAAARIRILNRSEPVPFPL-DEEDIAEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  +   +  R ++   +R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 LRLKYRYLDLRRPEMLHRLRLRHQVTRFVRGYLDNAGFIDVETPVLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR   G F+ALPQ+PQ +KQLLM +G DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRTQPGHFFALPQSPQLFKQLLMVAGLDRYYQITKCFRDEDLRADRQP-EFTQIDIEASF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+++ ++ T E ++RG+F E   G  + + F R+ Y DA+ R+G D+PDLRNP+ +  +T
Sbjct: 240 VDEEAVMGTAEPMIRGLFAEVL-GVQLPDPFPRMTYRDAMHRFGVDRPDLRNPLELTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF +  +  P   V  +   GG   +RA  D   ++    G  GLA+I   
Sbjct: 299 DLMRAVDFKVFREA-AERPHGRVACLRVPGGAQLSRAQIDAYTQFTAIYGARGLAWIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNHIA 421
             + GN     P+ K L  +    I  R     GD  FF A D  K  + A  + RN +A
Sbjct: 358 ALDQGNEGLQSPIVKFLPEMVLSEILRRSGAAAGDILFFGA-DTAKIVNEALGNLRNRVA 416

Query: 422 QELGIINCNCFEFC--WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            +LG++     E+C  WI DFP ++++++E +    H+PFT PQ       G D  +  A
Sbjct: 417 ADLGLLEG---EWCPVWITDFPMFDYDDKEDRWTSTHHPFTAPQTEHLETLGQDPGNALA 473

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H   V  + F+ +GI  E   ++FG L  A   G PPHGG+
Sbjct: 474 RAYDLVLNGNEIGGGSIRIHQEAVQEKVFAALGIGAEEARDKFGFLLDALHYGAPPHGGL 533

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL GA+ +R+V  FP +Q    LL  +P TV+ +QL+ELG+R+
Sbjct: 534 AFGLDRLVMLLCGAETIRDVIAFPKTQKAGCLLTEAPGTVADKQLQELGIRL 585


>gi|307243797|ref|ZP_07525928.1| aspartate--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492800|gb|EFM64822.1| aspartate--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 596

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 236/594 (39%), Positives = 361/594 (60%), Gaps = 19/594 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT   GDL  SD+G  V L GWV + R  GG++F+D+RD  GI+Q+V + + +   FE A
Sbjct: 9   RTCYAGDLRSSDIGKEVVLMGWVQKKRNLGGLVFVDLRDRGGISQIVFDTEVSKEAFEKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + SE+V+ + G V+ R ++  N NI TG+IE+ A+++ +L+ ++  P+ +  + E  E
Sbjct: 69  EKLGSEYVIGVRGKVLERQSK--NPNIPTGEIEVFAEELRVLNESQTPPIYIKDDDEVSE 126

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLR+  + KN++ R ++ N +R  +   +F E  TP L   +PEGARD+LV
Sbjct: 127 ALRLKYRYLDLRKPKMQKNLMLRHKVANVVRNYLSDNDFCEIETPFLVKPTPEGARDYLV 186

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN+G FYALPQ+PQ YKQLLM SG DRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 187 PSRVNEGKFYALPQSPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 245

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE++D++  ME +++ +F++  + + V+  F R+ Y DA+ +YG+DKPD R  +   N+
Sbjct: 246 FVEENDVMTIMEGLVKDIFKKVLDRDIVT-PFPRMTYADAMDKYGSDKPDTRYGLEFVNI 304

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           +       F+VFS   S  PG  V  I   GG  +  R     + + A++    GLA++ 
Sbjct: 305 SNIVADCGFKVFSD--STKPGSSVRGINVVGGADHFTRKAISHLEDHAKTYRAKGLAWM- 361

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            ++ + G  +   P+AK         I   +D + GD   F+A  DP+ + +     R  
Sbjct: 362 -KITDEGVTS---PIAKFFTEEELAKITGAMDAKSGDLLLFVADKDPVVYDALGQ-VRIA 416

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLK-GNDLLSI 477
           +A +LG+ + N F   W+ +FP +E +EE  +    H+PFT P    ++ L+   + L +
Sbjct: 417 VADKLGLADPNQFNLLWVTEFPIFEEDEENGRFVAKHHPFTSPMDEDLDKLESAENKLEL 476

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G IR   +E+  + F  +G + E   N+FG L  AF+ G PPHG
Sbjct: 477 RAKAYDIVLNGYEVGGGSIRISNAEIQKKMFKALGFTDEEAYNKFGFLIDAFKFGTPPHG 536

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DR+VMLL GA+N+REV  FP +QN    +  +PS    +QL+EL +R+
Sbjct: 537 GIAFGLDRLVMLLAGAENIREVIAFPKNQNAVCPMTNAPSIAEDDQLKELSIRV 590


>gi|222617760|gb|EEE53892.1| hypothetical protein OsJ_00416 [Oryza sativa Japonica Group]
          Length = 675

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 236/600 (39%), Positives = 346/600 (57%), Gaps = 27/600 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R   CG+LG  D G  VRL GWV   R H G+ FL +RD  G  QV   P+    + +  
Sbjct: 88  RDALCGELGAGDAGRRVRLCGWVALHRAHAGLTFLTLRDRSGTVQVTTLPEYPEVYAVVN 147

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFG----ER 118
            +R E V+ ++G+V SR  E IN ++ TG IE++A  I +L SV   LP P+      + 
Sbjct: 148 KLRVESVVAVEGVVRSRPTEAINTDMKTGAIEVAADNIYVLNSVTRSLPFPITTADTVKE 207

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEG 176
           ++PE IR ++R LDLRR  +  N+  R  ++  +R R + +  +F+E  TP+L+ S+PEG
Sbjct: 208 KFPEEIRLRFRVLDLRRPQMQSNLRLRHNVVKHIR-RYLEDRHDFVEIETPVLSKSTPEG 266

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSRV  G FYALPQ+PQ +KQ+LM SGF++Y+QIA CFRDED R+DR P EF Q
Sbjct: 267 ARDYLVPSRVQPGMFYALPQSPQLFKQMLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQ 325

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDME++F   +D+L   E ++R +F+E  +   + N F R+ Y +A+ RYGTD+PDLR  
Sbjct: 326 LDMEIAFTSMEDMLKLNEELMRHIFQEVGDIK-LPNPFPRLTYTEAMNRYGTDRPDLRFD 384

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD------RMNEWARS 350
             + +V++ F+ S F++F+  L      +   +P    GG + F +       +   A  
Sbjct: 385 WQLKDVSDAFLGSSFKIFADTLENGGVIKALCVP----GGAKEFSNTDLKKGTVYTEASK 440

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
            G  GL   F ++ ++G + G+GP+   L     E +   LD + GD   F  G+     
Sbjct: 441 AGAKGLP--FLKVMDNGELEGIGPLVASLKPEKKEQLLKHLDAKSGDLILFALGEQSAAN 498

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                 R  IA +L +I+ +     W+ DFP +EWN +E++ +  H+PFT P    E + 
Sbjct: 499 RILGRLRLFIAHKLEVIDTSAHSILWVTDFPMFEWNSDEQRYEALHHPFTAPNP--EDM- 555

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            NDL S +A  YD++ NG EI  G +R + S+V  + F  +GIS E  E +FG L   F 
Sbjct: 556 -NDLPSARALAYDMIYNGVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFD 614

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR+VMLL G  ++R+V  FP +      L  +PS V  +QL++LG R
Sbjct: 615 MGAPPHGGIAYGLDRLVMLLAGENSIRDVIAFPKTTTAQCSLTKAPSPVDPQQLKDLGFR 674


>gi|323128234|gb|ADX25531.1| aspartyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 582

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/591 (39%), Positives = 352/591 (59%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++   
Sbjct: 3   RSMYAGRVREEHIGTTITLKGWVGRRRDLGGLIFIDLRDREGVMQLVINPEDVSSDVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++GLV +R  +  N  + TG +EL    + IL+ A+  P  +  + E  
Sbjct: 63  AERLRSEYVIEVEGLVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V +E + G  V+  F R+ YD A+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDIVEGMITKVMKE-TKGIDVTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+     P  +   +       +R   D++ E+A+  G  GLA   W
Sbjct: 299 LTETVKGIDFKVFSEA----PAVKAIVVKENADRYSRKDIDKLTEFAKQFGAKGLA---W 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G +A  GPVAK L  + TE +  +L + + D   F+A D L+  +    A RN I
Sbjct: 352 VKVTDGQLA--GPVAKFLTSIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRNRI 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A 
Sbjct: 408 AKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVRAI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I
Sbjct: 528 IGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 578


>gi|153854668|ref|ZP_01995918.1| hypothetical protein DORLON_01916 [Dorea longicatena DSM 13814]
 gi|149752772|gb|EDM62703.1| hypothetical protein DORLON_01916 [Dorea longicatena DSM 13814]
          Length = 603

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/592 (39%), Positives = 353/592 (59%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH C +L  ++VG  V + GWV + R  GG++F+D+RD  GI QVV      ++A  E 
Sbjct: 10  RTHRCAELSAANVGEKVTIMGWVQKNRNKGGLVFVDVRDRSGIIQVVFEEGKCEAALIEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +R+E+V+ I G V  RS   +N ++ TG+IE+  +++ ILS +E  P  +    +  
Sbjct: 70  AAKLRAEYVVAIVGTVAKRSG-AVNDHLATGEIEVIPEELRILSESETPPFHIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L +N++ R+++    R  +  E F+E  TP+L  S+PEGARD+L
Sbjct: 129 EEVRLKYRYLDLRRPDLQRNLMMRSKVATLTRQFLAEEGFLEIETPVLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+ QG FYALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRIQQGQFYALPQSPQLFKQLLMCSGYDRYFQIAKCFRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD++   E +L  +F+E   G  VS    R+ + +A+ R+G+DKPD+R  + + N
Sbjct: 248 SFVDVDDVIEVNERLLAKLFKEVL-GVEVSLPIQRMTWQEAMDRFGSDKPDIRFGMELTN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           VT+     EF VF    ++  G  V  I AKG GG  R   D++ ++A+  G  GLAYI 
Sbjct: 307 VTDVVKDCEFVVFKN--AIENGGTVRGINAKGQGGMARKKIDKLVDFAKDYGAKGLAYI- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G V      AK +     +A+   +  ++GD   F A             R  +
Sbjct: 364 -AIHEDGTVK--SSFAKFMTDDEMKALIEAMGGENGDLLLFAADKNKVVWDTLGALRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++ +++ N ++F W+ +FP  EW+EE+ +    H+PFTMP         +D   ++A 
Sbjct: 421 ARQMELLDKNEYKFLWVTEFPLLEWSEEQNRYTAMHHPFTMPMEEDLQYIDSDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R    ++  + F  +G ++E  + +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIFDQDIQSKMFEVLGFTEEQAQEQFGFLLTAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VML+    ++R+V  FP  ++  DL+  +P  V  +QL ELG+ ++
Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASDLMTEAPGHVDAKQLEELGIAVI 592


>gi|258424055|ref|ZP_05686937.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845676|gb|EEV69708.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 588

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/592 (40%), Positives = 350/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +IA
Sbjct: 4   RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDEEGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +L+ V +E  +   +++ F R+ Y +A+RRYG+DKPD R  + + +
Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKD-VEINDAFPRMTYKEAMRRYGSDKPDTRFEMELID 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF   +  N G E+ AI AKG      R   D + E+    G  GLA++
Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+ +     N E +      + GD   F+A  P          R  
Sbjct: 360 --KVVEDGLT---GPIGRFFETENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A
Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586


>gi|226954441|ref|ZP_03824905.1| aspartyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226834790|gb|EEH67173.1| aspartyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 592

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/599 (40%), Positives = 356/599 (59%), Gaps = 17/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   FE A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFETAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R A T NAN+++GQIE+  ++IE+L+ +E  P P+  E     E
Sbjct: 63  KARSEFVLKITGRVRRRYAGTENANMVSGQIEVLGKEIEVLAASETPPFPLNDENTNISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLD+RR  + + +  R+++ N +R       F++  TPILT ++PEGARD+LV
Sbjct: 123 EIRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYFEDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E    N   + F R+ Y DA+R Y +DKPD+R P+ + +V
Sbjct: 242 FMSDDDIMDLMEGLTVKMFDELL--NVKFDKFERMTYADAMRDYASDKPDMRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   + A+   G G   R+  D   ++    G  GLAYI  
Sbjct: 300 ADLMQDVEFKVFAGP-AKDPKGRIVALRVPGAGSLPRSAIDEYTKFVGIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              E G      P+ K +  +  + ++ R+  ++GD  FF   D  K  + A  A R  I
Sbjct: 359 NELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFF-GADKAKVVNDAMGALRVKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478
             +L +     +   W++DFP +E  ++ K     H+PFT+P+  +E +K N  + LS+ 
Sbjct: 417 GHDLNLATKE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEEVKNNPGEALSV- 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG EI  G +R +  E+    F  +GI ++  E +F  L  A + G PPHGG
Sbjct: 474 --AYDMVLNGTEIGGGSLRIYTLEMQKAIFEALGIGEDEAEEKFSFLLNALRYGAPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DR++ML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E  KK
Sbjct: 532 LAFGLDRLIMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQAKK 590


>gi|313202118|ref|YP_004040776.1| aspartyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312441434|gb|ADQ85540.1| aspartyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 586

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 230/581 (39%), Positives = 358/581 (61%), Gaps = 13/581 (2%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75
           +G  V L GW HR R HGG+IF+D+RD  G+ Q+V +PD+   F++A++VRSE+VL +  
Sbjct: 6   IGQTVTLCGWAHRRRDHGGVIFIDLRDREGMAQIVIDPDTPEAFKLAETVRSEFVLKVVC 65

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V +R   T+NANI TG++E+ A +IEIL+ +   P  +  +    E +R ++R++DLRR
Sbjct: 66  KVRARPEGTVNANIPTGEVEMLATEIEILNPSLTPPF-MLDDDNLSEMVRLEHRYIDLRR 124

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             + KN++ R R+  ++R  + +  FIE  TP+LT S+PEGARD+LVPSRV+ G F+ALP
Sbjct: 125 PAMQKNMMLRYRVAKTLRDHLDSNGFIEVETPMLTRSTPEGARDYLVPSRVHHGQFFALP 184

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D+E SF+ +++I+N +E+
Sbjct: 185 QSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQP-EFTQVDIETSFLGEEEIMNIVED 243

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++R +F+   + + +   F R+ + +A+ +YG+DKPD+R  + +  +T+     +F+VF+
Sbjct: 244 MIRKMFKSVQDID-LPAQFPRMPFSEAMNKYGSDKPDMRVTLEITELTDIMKDVDFKVFA 302

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI----FWRLDESGNVAG 371
              ++  G         G   +R+  D   E+ +  G  GLAYI      +L+E G    
Sbjct: 303 GAANMVGGRVAAMRVPNGAAISRSEIDAYTEFVKIYGAKGLAYIKINDITKLNEEGL--- 359

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCN 430
             P+ K++++   +AI  R   Q+GD  FF   D  K  + A  A R  +  E G ++  
Sbjct: 360 QSPIVKNIHVNALQAIIDRTGAQNGDIVFF-GADKAKVVNEALGALRTKVGHEKGHVDGR 418

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
            +   W++DFP +E +EE  +    H+PFT P+ G E L   +  +  +  YD+V NG+E
Sbjct: 419 AWAPLWVVDFPMFEHDEEADRWVALHHPFTSPKDGHEDLLTTNPGAALSKAYDMVLNGWE 478

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           +  G +R H  EV  + F  + ISKE  + +FG L  A Q G PPHGG+A G+DR+V L+
Sbjct: 479 VGGGSVRIHKQEVQSKVFDALKISKEEAQEKFGFLLDALQYGAPPHGGLAFGLDRLVTLM 538

Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GA+++R+V  FP +Q    L+  +P+ V  +QLREL +R+
Sbjct: 539 AGAESIRDVIAFPKTQRAQCLMTNAPNEVDEKQLRELHIRV 579


>gi|283470906|emb|CAQ50117.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 588

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/592 (40%), Positives = 349/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +IA
Sbjct: 4   RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +L+ V +E      +++ F R+ Y +A+RRYG+DKPD R  + + +
Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKG-VEINDAFPRMTYKEAMRRYGSDKPDTRFEMELID 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF   +  N G E+ AI AKG      R   D + E+    G  GLA++
Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+ +     N E +      + GD   F+A  P          R  
Sbjct: 360 --KVVEDGLT---GPIGRFFETENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A
Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586


>gi|325262052|ref|ZP_08128790.1| aspartate--tRNA ligase [Clostridium sp. D5]
 gi|324033506|gb|EGB94783.1| aspartate--tRNA ligase [Clostridium sp. D5]
          Length = 594

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/590 (40%), Positives = 356/590 (60%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L  +++G  V + GWV + R  GGI+F+D+RD  GI Q+V   D  +A  + A
Sbjct: 10  RTHRCGELSSANIGEMVTVMGWVQKNRNKGGIVFVDLRDRSGILQIVFEGDDKAALIDKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+V+ + G V +RS   +N N+ TG+IE+ A+++ ILS +E  P P+    +  E
Sbjct: 70  AKLRSEFVIAVVGKVEARSG-AVNENLATGEIEIRAEELRILSESETPPFPIEENSKTKE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  L +N++ R++I    R  +  E F+E  TPIL  S+PEGARD+LV
Sbjct: 129 ELRLKYRYLDLRRPDLQRNLMMRSQIATLTRQFLSDEGFLEIETPILGKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFY LPQ+PQ +KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME+S
Sbjct: 189 PSRVHPGSFYGLPQSPQLFKQLLMCSGYDRYFQIAKCFRDEDLRADRQP-EFTQIDMELS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE DD+++  E +L  +F+E  +   V+    R+ + +A+ RYG+DKPD R  + + +V
Sbjct: 248 FVEVDDVIDVNERLLVKLFKEVLDVE-VALPIPRMTWQEAMDRYGSDKPDTRFGMELVDV 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE     +F VF    ++  G  V  I AKG GG  R   D++ ++A+  G  GLAYI  
Sbjct: 307 TEVVKGCDFVVFKG--AIENGGTVRGINAKGQGGMPRKKIDKLVDFAKDFGAKGLAYI-- 362

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            L E G++      AK +     + +   +  + GD   F A           + R  IA
Sbjct: 363 ALQEDGSMK--SSFAKFMTEEEMQGLVQAMSGEPGDLLLFAADRNKVVWDVLGNLRLEIA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +++ I++ N ++F WI +FP  EW++E+ +    H+PFTMP         +D   ++A  
Sbjct: 421 RQMEILDKNEYKFAWITEFPLLEWSDEQNRFMAMHHPFTMPMEEDLQYIDSDPGRVRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R   ++V  + F  +G +KE    +FG L  AF+ G+PPH G+A 
Sbjct: 481 YDIVLNGNEIGGGSVRIFQNDVQEKMFEVLGFTKEQAYEQFGFLLDAFKYGVPPHAGLAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VML+    ++R+V  FP  ++   L+  +PS V  +QL ELGL +
Sbjct: 541 GLDRMVMLMAKEDSIRDVMAFPKVKDASCLMTEAPSLVDEKQLGELGLEL 590


>gi|167035198|ref|YP_001670429.1| aspartyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|189082136|sp|B0KTJ6|SYD_PSEPG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166861686|gb|ABZ00094.1| aspartyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 591

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 247/596 (41%), Positives = 355/596 (59%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRAETFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R    +NAN+ +G IE+   ++ +L+ AE  P P+    +  E 
Sbjct: 63  RVRSEYVVQITGKVRKRPDGAVNANMASGAIEILGYQLNVLNEAETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R +YRF+DLRR  +   +  R+RI +S+R R + EN F++  TPILT ++PEGARD+LV
Sbjct: 123 TRLRYRFIDLRRPEMADKLRLRSRITSSIR-RFLDENGFLDVETPILTRATPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 182 PSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++ +I+   E+++R +F+E  +       F  + +++A+RRYG+DKPDLRNP+ + +V
Sbjct: 241 FLDESEIMGLTESMIRKLFKEVLDLEF--GEFPHMTFEEAMRRYGSDKPDLRNPLELVDV 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     +F+VF+   + +P   V A+   GG    R+  D   ++    G  GLAYI  
Sbjct: 299 ADQLKDVDFKVFAGPAN-DPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGAKGLAYIKV 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G      P+ K++   N   I  R+   DGD  FF A D  K  S A  A R  +
Sbjct: 358 NERAKGVEGLQSPIVKNIPEANLNNILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIRL 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +  ++ C  +   W++DFP +E N E+      H+PFT P+   E L+ N   ++ + 
Sbjct: 417 GHDFELLTCE-WAPMWVVDFPMFEEN-EDGSFTALHHPFTAPKCTPEELEANPATAL-SR 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  E+    F  +GI  E  E +FG L  A + G PPHGG+A
Sbjct: 474 AYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIEAEEQEEKFGFLLDALKFGAPPHGGLA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VML+ GA+++REV  FP +Q+   ++  +P  V  + LREL +R+ E  K
Sbjct: 534 FGLDRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGLVDAKALRELHIRLREQTK 589


>gi|299768800|ref|YP_003730826.1| aspartyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298698888|gb|ADI89453.1| aspartyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 594

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/598 (41%), Positives = 348/598 (58%), Gaps = 17/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R   T NAN+++GQIE+  + IE+L+ +E  P P+  E     E
Sbjct: 63  KARSEYVLKITGRVRRRYEGTENANMVSGQIEVLGKDIEVLAASETPPFPLNDENTNISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLD+RR  +   +  R+++ N +R       F++  TPILT ++PEGARD+LV
Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKLTNLIRNYFEDNGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E        + F R+ Y DA+R Y +DKPD+R P+ + +V
Sbjct: 242 FMSDDDIMDLMEVLTVKMFDELL--GVKFDKFQRMTYADAMRDYASDKPDMRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   + A+   G     R+  D   ++    G  GLAYI  
Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIVALRVPGAASLPRSAIDEYTKFVGIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G      P+ K +  +  E +  R+  QDGD  FF   D  K  + A  A R  I
Sbjct: 359 NELAKGIEGLQSPIVKFIEPIVLELL-ARVGAQDGDIVFF-GADKAKVVNDAMGALRVKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478
             +L +  C  +   W++DFP +E  ++ K     H+PFT+P+  +E +K N  + LS+ 
Sbjct: 417 GHDLNLATCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEEVKSNPGEALSV- 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG
Sbjct: 474 --AYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G+DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PK
Sbjct: 532 LAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589


>gi|260881133|ref|ZP_05403711.2| aspartate--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260849619|gb|EEX69626.1| aspartate--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 601

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/598 (39%), Positives = 356/598 (59%), Gaps = 14/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH CG L  +DVG  V L GWV R R HGG+IF+D+RD  G  QVV   A  +   F  
Sbjct: 9   RTHHCGVLRKTDVGQEVVLCGWVSRRRDHGGLIFVDMRDRSGFVQVVFDEAAMNEGTFHK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+R+E+ + + G + +RS ETIN NI TG+IE+   ++ IL+ ++  P  +    +  
Sbjct: 69  AESLRNEFCIAVRGKIRARSEETINPNIETGEIEVVCAELRILNPSKTPPFYIQDGVDVD 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  + KNI+ R R+   MR       F+E  TP+L  S+PEGARDFL
Sbjct: 129 EMVRLKYRYLDLRRPEMQKNIILRHRVTKIMRDFFDRNGFLEIETPMLCKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ +KQ+L  +GF++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 189 VPSRVNPGEFYALPQSPQIFKQILQVAGFEKYFQIVRCFRDEDLRADRQP-EFTQLDIEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++QDDIL  ME +++ +F++ + G  V   F R+ +D A+ +YG+DKPDLR  + + +
Sbjct: 248 SFMDQDDILTLMEEMIKELFKK-AIGADVPTPFERMEWDTAMDKYGSDKPDLRFDMPLMD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           ++E+   S F+VF+ +  +  G  V  I   G     R   D + ++ +  G  GLA+I 
Sbjct: 307 ISEYVKGSSFKVFNSV--IENGGMVKCIKVDGYADIPRRRLDDLVKFVQVYGAKGLAWIQ 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E G  +   P  K         I      + GD    +A   L   +     R  +
Sbjct: 365 YT--EEGIKS---PFKKFYEDETFAKIAEATGAKTGDLLLVVADKRLVVDTALGQLRLEM 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
            +E G+I+ +   F W++DFP YEW++EE +    H+PFT P+   ++ L  + +  +KA
Sbjct: 420 GKERGLIDPDKLRFLWVVDFPMYEWSDEEHRFKAMHHPFTAPRDEDIDLLNTDRMGDVKA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G +R + +++  + F ++G++ E    +FG +  AFQ G PPHGG+
Sbjct: 480 KAYDMVLNGVEIGGGSLRIYNADLQEKVFESLGLTPEQAHTKFGFMMDAFQYGTPPHGGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VML+    ++R+V  FP +Q+  D++  +PS V  +QLREL +R     K+
Sbjct: 540 AFGLDRLVMLMAKRPSIRDVIAFPKTQSARDVMSNAPSPVDEKQLRELSIRTAVKKKE 597


>gi|312865833|ref|ZP_07726055.1| aspartate--tRNA ligase [Streptococcus downei F0415]
 gi|311098708|gb|EFQ56930.1| aspartate--tRNA ligase [Streptococcus downei F0415]
          Length = 582

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 235/595 (39%), Positives = 359/595 (60%), Gaps = 27/595 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +GS + L GWV R R  GG++F+D+RD  GI Q+V NP+    EI   
Sbjct: 3   RSIYAGRVRSEHIGSQLTLKGWVGRRRDLGGLVFIDLRDREGIMQLVINPEQVSKEIMDK 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+R+E+V+ + G   +R  E  N  + TG +EL    + IL+ ++  P  +  + E  
Sbjct: 63  AESLRTEYVIEVTGTAQAR--EQANDKLATGAVELQVSDLVILNTSKTTPFEIKDDAEMT 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR ++ KN+  R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDNRLRYRYLDLRRPSMLKNLKLRAKVTHSVRNYLDELEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +G DRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGLDRYYQIVKCFRDEDLRGDRQP-EFTQIDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+++++I    E ++  V +E + G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLDEEEIQEITEGLIARVMKE-TKGIDVTLPFPRMAYDDAMNNYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F+VF++     P  +   +       +R   D++ + A+  G  GLA++ +
Sbjct: 299 LTDTVKDIDFKVFAQA----PAVKAIVVKDAADKYSRKAIDKLTDVAKQYGAKGLAWVKY 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G V   GP+AK L  +  + +  RL + D D   F+A D L+  +    A R  +
Sbjct: 355 M---DGKVT--GPIAKFLTAI-ADKLTERLQLVDNDLVLFVA-DSLEVANTTLGALRTRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479
           A+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+P Q   + L+G DL  ++A
Sbjct: 408 AKELDLIDQSQFNFLWVVDWPMFEWSEEEDRYMSAHHPFTLPTQETADQLEG-DLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIR-NH--MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             YD+V NG+E+  G +R NH  + E ML+A   +G S+E    +FG L  A   G PPH
Sbjct: 467 VAYDIVLNGYELGGGSLRINHKDLQERMLKA---LGFSQESANEQFGFLLEAMDYGFPPH 523

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GG+A G+DR VM+L G  N+REV  FP +    D +  +PS V+ +QL EL L++
Sbjct: 524 GGLAIGLDRFVMILAGQDNIREVIAFPKNNKASDPMTQAPSLVAQKQLEELALQV 578


>gi|262374903|ref|ZP_06068137.1| aspartyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262309916|gb|EEY91045.1| aspartyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 594

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 354/596 (59%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
            VRSE+VL I G V  R   T NAN+++GQIE+  ++IE+L+ ++  P P+  E     E
Sbjct: 63  KVRSEFVLKITGRVRRRYEGTENANMVSGQIEVLGKEIEVLAQSDTPPFPLNDENTNISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLD+RR  +   +  R+++ N +R       F++  TPILT ++PEGARD+LV
Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKLTNLIRNYFEDNGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E    N   + F R+ Y+DA+R Y +DKPD+R P+ + +V
Sbjct: 242 FMSDDDIMDLMETLTVKMFKELL--NVEFDKFPRMTYNDAMRDYASDKPDMRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   + A+   G G   R+  D   ++    G  GLAYI  
Sbjct: 300 ADLMQDVEFKVFAGP-AKDPKGRIVALRVPGAGSLPRSAIDEYTKFVGIYGARGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              E G      P+ K +  +  + ++ R+  ++GD  FF   D  K  + A  A R  I
Sbjct: 359 NELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFF-GADKAKVVNDAMGALRVKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             ++ +  C  +   W++DFP +E  ++ K     H+PFT+P+  +E +K N   ++ + 
Sbjct: 417 GHDMKLATCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEEVKNNPGAAL-SV 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H  E+    F  +GI +E  E +F  L  A + G PPHGG+A
Sbjct: 474 AYDMVLNGTEIGGGSLRIHNLEMQKAIFEALGIGEEEAEEKFSFLLNALRYGAPPHGGLA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VML+ G  ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PK
Sbjct: 534 FGLDRLVMLMTGGASIRDVIAFPKTKTAECPLTQAPAPVESNQLRDLGIRLREKPK 589


>gi|262281084|ref|ZP_06058866.1| aspartyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257315|gb|EEY76051.1| aspartyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 595

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/598 (41%), Positives = 348/598 (58%), Gaps = 17/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R   T NAN+++GQIE+  + IE+L+ +E  P P+  E     E
Sbjct: 63  KARSEYVLKITGRVRRRYEGTENANMVSGQIEVLGKDIEVLAASETPPFPLNDENTNISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLD+RR  +   +  R+++ N +R       F++  TPILT ++PEGARD+LV
Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKLTNLIRNYFEDNGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E        + F R+ Y DA+R Y +DKPD+R P+ + +V
Sbjct: 242 FMSDDDIMDLMEVLTVKMFDELL--GVKFDKFQRMTYADAMRDYASDKPDMRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   + A+   G     R+  D   ++    G  GLAYI  
Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIVALRVPGAASLPRSAIDEYTKFVGIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G      P+ K +  +  E +  R+  QDGD  FF   D  K  + A  A R  I
Sbjct: 359 NELAKGIEGLQSPIVKFIEPIVLELL-ARVGAQDGDIVFF-GADKAKVVNDAMGALRVKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478
             +L +  C  +   W++DFP +E  ++ K     H+PFT+P+  +E +K N  + LS+ 
Sbjct: 417 GHDLNLSTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEEVKSNPGEALSVA 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG
Sbjct: 475 ---YDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G+DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PK
Sbjct: 532 LAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589


>gi|87118959|ref|ZP_01074857.1| aspartyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86165350|gb|EAQ66617.1| aspartyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 589

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/592 (40%), Positives = 359/592 (60%), Gaps = 15/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG+L  S++   + L GWVHR R HGG+IFLD+RD  G+TQVV +PD A  F +A 
Sbjct: 2   RSHYCGELNASNISQEITLCGWVHRRRDHGGVIFLDVRDREGLTQVVFDPDRADSFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+V+ + GLV +R   T+N N+ TG+IE+    +EIL+ A+  P  +   +   E 
Sbjct: 62  SVRNEYVVKLTGLVRARPEGTVNPNMATGEIEVLGTSLEILNAAQTPPFQLDEHQSVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR K RF+DLRR  +   +  R+++ + +R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 IRLKNRFVDLRRPEVQAKMRFRSKVTSVLRNYLDDNGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G+F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTQEGNFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I++  E+++ G+F++  N +     F  + Y  A+  YG+DKPDLR P+ +  V+
Sbjct: 241 MGEKEIMSMTEDMIVGLFKQLLNVDL--GTFPTMPYAQAMETYGSDKPDLRIPLKIVTVS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + +F+VFS   +V+P   V A+   GG    R   D   ++    G  GLAYI  +
Sbjct: 299 DLMENVDFKVFSGP-AVDPKGRVAALKVPGGNALTRKQIDAYTKYVSIYGAKGLAYI--K 355

Query: 363 LDESGNVAG--MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
           +++  N+      P+ K L +   + +  RL  +DGD  FF   D  K  + A  A R  
Sbjct: 356 VNDKSNLEEGLQSPIVKFLPVEVRQQLLERLGAEDGDLIFF-GSDSEKVVNEALGALRCK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + ++L +  C  +   W++DFP +E    +  I   H+PFT P   +E LK N L ++  
Sbjct: 415 LGEDLELYTCE-WAPLWVVDFPMFE-ETSDGGITAIHHPFTAPSCSVEELKANPLTALSQ 472

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++    F  + I +   E +FG L  A + G PPHGG+
Sbjct: 473 -AYDMVLNGTELGGGSIRIHQSDMQQTVFELLNIDEAEQEEKFGFLLDALKFGAPPHGGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VML+ G+ ++R+V  FP +Q+   LL  +P  VS +QL+EL +R+
Sbjct: 532 AFGLDRLVMLMTGSASIRDVIAFPKTQSATCLLTQAPGEVSEKQLKELSIRV 583


>gi|222823655|ref|YP_002575229.1| aspartyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|222538877|gb|ACM63978.1| aspartyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 583

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 241/596 (40%), Positives = 345/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTH   +L + +VG  V L GWV+  R HGG+IF+D+RD  G+ Q+V +P  +     IA
Sbjct: 2   RTHYNTELNIQNVGEEVTLCGWVNSYRDHGGVIFIDLRDRSGLIQLVCDPADNQEAHNIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+VL   G +  R    +N  + TG+IE+   K+ I + +  +P  + G+    E
Sbjct: 62  SSVRNEYVLIAQGKIRPRGEGLVNPKLKTGEIEVVINKLTIENESAVVPFAI-GDESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L+ N   R+    + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRSKKLYDNFALRSTACIAARNSLSNMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ DI+   EN+L+ +F+  + G  +S  F ++ Y +A+  YG+DKPDLR  +   +V
Sbjct: 240 FCEQKDIIAMAENLLKDIFK--ACGKEISIPFRQMSYKEAMENYGSDKPDLRFDMKFIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            + FV S   +F+ I        + A+    G    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFVKSNNEIFANIAKDTKKNRIKALRVPKGDTIFSKRQMQRFEEFVRKFGAAGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   +  R  ++ GD  FF AG       +    R  +
Sbjct: 358 MKED-----GPKGPLCKFFSEEDLNVLIQRCQLEIGDVVFFGAGAKKTVLDYMGRFRLFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A E+ II+ +  EF W++DFP +E N ++      H+PFTMP+    ++   DL  I + 
Sbjct: 413 ADEMKIIDEDKLEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPK----NIDEQDLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +D+V NG E+  G IR H S +  + F  + I +E    +FG L  A   G PPHGGIA
Sbjct: 468 AHDVVLNGVELGGGSIRIHKSTIQEKVFKLLNIDEEEQRKKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++MLL  + ++REV  FP +Q    L+  +PS VS EQ+RELG+R+ EN K
Sbjct: 528 IGLDRLIMLLTKSSSIREVIAFPKTQRAQCLMTQAPSEVSNEQMRELGIRLRENTK 583


>gi|332364047|gb|EGJ41825.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 584

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 348/591 (58%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G  VS  F R+ YDDA+  YG DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA   W
Sbjct: 299 LTDLVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G +AG  PVAK L  + ++     L +++ D   F+A D L+  + A  A R  +
Sbjct: 352 VKVTDGELAG--PVAKFLTELTSQLTEA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A 
Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQGLEGDLSKVRAV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G +N+REV  FP +    D +  +PS V V QL EL L++
Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVPVAQLEELSLQV 578


>gi|332365464|gb|EGJ43225.1| aspartate--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 584

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/591 (39%), Positives = 348/591 (58%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVATEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E +N  + TG +EL  + + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEYVIEVTGKVAAR--EQVNDKLATGSVELHVESLIVLNTAKTTPFEIKDGIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G  V   F R+ YDDA+  YG DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVELPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA   W
Sbjct: 299 LTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G +AG  PVAK L  + ++     L +++ D   F+A D L+  + A  A R  +
Sbjct: 352 VKVADGELAG--PVAKFLTDLTSQLTEA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A 
Sbjct: 408 GKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSNQEATEQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++
Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578


>gi|325274571|ref|ZP_08140629.1| aspartyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324100298|gb|EGB98086.1| aspartyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 590

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/596 (41%), Positives = 356/596 (59%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 2   RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRAETFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V  R    +NAN+ +G IE+   ++ +L+ AE  P P+    +  E 
Sbjct: 62  RVRSEYVVQLTGKVRKRPEGAVNANMASGAIEILGYQLTVLNEAETPPFPLNEYSDVGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R +YRF+DLRR  +   +  R+RI +S+R R + EN F++  TPILT ++PEGARD+LV
Sbjct: 122 TRLRYRFIDLRRPEMADKLRLRSRITSSIR-RFLDENGFLDVETPILTRATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 181 PSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++++I+   E+++R +F+E  +       F  + +++A+RRYG+DKPDLRNP+ + +V
Sbjct: 240 FLDENEIMGLTESMIRKLFKEVLDLEF--GEFPHMTFEEAMRRYGSDKPDLRNPLELVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     +F+VF+   + +P   V A+   GG    R+  D   ++    G  GLAYI  
Sbjct: 298 ADQLKDVDFKVFAGPAN-DPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGAKGLAYIKV 356

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G      P+ K++   N   I  R+   DGD  FF A D  K  S A  A R  +
Sbjct: 357 NERAKGVEGLQSPIVKNIPEANLNTILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIRL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +  ++ C  +   W++DFP +E N E+      H+PFT P+   + L+ N   ++ + 
Sbjct: 416 GHDFELLTCE-WAPMWVVDFPMFEEN-EDGSFTALHHPFTAPKCTPQELEANPATAL-SR 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  E+    F  +GI  E  E +FG L  A + G PPHGG+A
Sbjct: 473 AYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIEAEEQEEKFGFLLDALKFGAPPHGGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VML+ GA+++REV  FP +Q+   ++  +P  V  + LREL +R+ E  K
Sbjct: 533 FGLDRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGLVDAKALRELHIRLREQTK 588


>gi|315931838|gb|EFV10793.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 575

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/591 (40%), Positives = 347/591 (58%), Gaps = 22/591 (3%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIAKSVRSEW 69
           +G+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+ +    EIA + R+E+
Sbjct: 1   MGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIASNARNEF 60

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREYPESIRFK 127
           VL  +G +  R    +N  + TG+IE+   K   L++  E  +P F   +    E +R K
Sbjct: 61  VLIAEGTIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFAIADESVNEELRLK 117

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           YRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LVPSRV+
Sbjct: 118 YRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLVPSRVH 177

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMSF EQ 
Sbjct: 178 QGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMSFCEQK 236

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
           D++N  E  L+ +F+  + G  +   F ++ Y DA+  YG+DKPDLR  +   +V + F 
Sbjct: 237 DVINVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFNLKFIDVIDIFA 294

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
            S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+I  ++ E
Sbjct: 295 KSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFI--QVKE 352

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G     GP+ K  +  +   +  R +++ GD  FF AG       +    R  +A EL 
Sbjct: 353 DG---LKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRIFLANELN 409

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           +I+ N  EF W++DFP +E N ++      H+PFTMP+    ++   DL  I +  YD+V
Sbjct: 410 LIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPK----NIDETDLEEISSIAYDVV 464

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
            NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGGIA G+DR
Sbjct: 465 LNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIAIGLDR 524

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           ++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 525 LIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 575


>gi|15924620|ref|NP_372154.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927210|ref|NP_374743.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|21283309|ref|NP_646397.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49486463|ref|YP_043684.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57650511|ref|YP_186524.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|82751228|ref|YP_416969.1| aspartyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87160735|ref|YP_494281.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|148268110|ref|YP_001247053.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394178|ref|YP_001316853.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221744|ref|YP_001332566.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156979948|ref|YP_001442207.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|161509855|ref|YP_001575514.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221141101|ref|ZP_03565594.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253317218|ref|ZP_04840431.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253732286|ref|ZP_04866451.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733119|ref|ZP_04867284.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255006415|ref|ZP_05145016.2| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257793703|ref|ZP_05642682.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258410998|ref|ZP_05681278.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420201|ref|ZP_05683156.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438203|ref|ZP_05689487.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443666|ref|ZP_05692005.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258446873|ref|ZP_05695027.1| aspartyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448787|ref|ZP_05696899.1| aspartyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258450544|ref|ZP_05698606.1| aspartyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258453605|ref|ZP_05701583.1| aspartyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262048623|ref|ZP_06021506.1| aspartyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051280|ref|ZP_06023504.1| aspartyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269203255|ref|YP_003282524.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893134|ref|ZP_06301368.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282920179|ref|ZP_06327904.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282928265|ref|ZP_06335870.1| aspartyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|284024686|ref|ZP_06379084.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294848659|ref|ZP_06789405.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295406751|ref|ZP_06816556.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296275915|ref|ZP_06858422.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297207650|ref|ZP_06924085.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245666|ref|ZP_06929531.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300911732|ref|ZP_07129175.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380773|ref|ZP_07363441.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|54039654|sp|P67015|SYD_STAAN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|54039655|sp|P67016|SYD_STAAW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|54042026|sp|P67014|SYD_STAAM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56749383|sp|Q6G8T9|SYD_STAAS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62287514|sp|Q5HFD3|SYD_STAAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|97196899|sp|Q2FG97|SYD_STAA3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|97196906|sp|Q2YT75|SYD_STAAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225433|sp|A7X344|SYD_STAA1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|172048921|sp|A6QHH2|SYD_STAAE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189082145|sp|A6U298|SYD_STAA2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189082146|sp|A5ITF4|SYD_STAA9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189082147|sp|A8Z2F7|SYD_STAAT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|13701428|dbj|BAB42722.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14247402|dbj|BAB57792.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204749|dbj|BAB95445.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49244906|emb|CAG43367.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57284697|gb|AAW36791.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|82656759|emb|CAI81188.1| aspartyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87126709|gb|ABD21223.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|147741179|gb|ABQ49477.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946630|gb|ABR52566.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374544|dbj|BAF67804.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156722083|dbj|BAF78500.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368664|gb|ABX29635.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253724075|gb|EES92804.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728875|gb|EES97604.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257787675|gb|EEV26015.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257840148|gb|EEV64612.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843912|gb|EEV68306.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848247|gb|EEV72238.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851072|gb|EEV75015.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257854448|gb|EEV77397.1| aspartyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858065|gb|EEV80954.1| aspartyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257861702|gb|EEV84501.1| aspartyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257864336|gb|EEV87086.1| aspartyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259160917|gb|EEW45937.1| aspartyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259163270|gb|EEW47829.1| aspartyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262075545|gb|ACY11518.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269941115|emb|CBI49501.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|282590072|gb|EFB95154.1| aspartyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282594527|gb|EFB99512.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282764452|gb|EFC04578.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285817312|gb|ADC37799.1| Aspartyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294824685|gb|EFG41108.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294968498|gb|EFG44522.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296887667|gb|EFH26565.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297177317|gb|EFH36569.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300885978|gb|EFK81180.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302333303|gb|ADL23496.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302751458|gb|ADL65635.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340710|gb|EFM06642.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312830016|emb|CBX34858.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315129914|gb|EFT85904.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315198670|gb|EFU28998.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140483|gb|EFW32337.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320144022|gb|EFW35791.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329314304|gb|AEB88717.1| Aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329727425|gb|EGG63881.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
 gi|329733124|gb|EGG69461.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 588

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/592 (40%), Positives = 348/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +IA
Sbjct: 4   RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +L+ V +E      ++  F R+ Y +A+RRYG+DKPD R  + + +
Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKG-VEINGAFPRMTYKEAMRRYGSDKPDTRFEMELID 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF   +  N G E+ AI AKG      R   D + E+    G  GLA++
Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+ +     N E +      + GD   F+A  P          R  
Sbjct: 360 --KVVEDGLT---GPIGRFFETENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A
Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586


>gi|325686765|gb|EGD28791.1| aspartate--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 584

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/591 (39%), Positives = 349/591 (59%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVRKEHVGQEVILKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEYVIEVTGKVAAR--EQANDKLATGSVELHVENLTVLNTAKTTPFEIKDGIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G  VS  F R+ YDDA+  YG DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIEVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++  
Sbjct: 299 LTELVKGVDFKVFSEA----PAVKSIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV-- 352

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              +  +    GPVAK L  + ++     L +++ D   F+A D L+  + A  A R  +
Sbjct: 353 ---KVADGELTGPVAKFLTDLTSQLTEA-LQLENNDLILFVA-DTLEVANAALGALRVRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A 
Sbjct: 408 AKELDLIDQDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++
Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578


>gi|325689244|gb|EGD31250.1| aspartate--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 584

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 236/591 (39%), Positives = 347/591 (58%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVLEVTGKVAAR--EQANDKLTTGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E + G  V   F R+ YDDA+  YG DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDITEGLIARVMKE-TKGIDVELPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA   W
Sbjct: 299 LTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G +AG  PVAK L  + T  +   L +++ D   F+A D L+  + A  A R  +
Sbjct: 352 VKVADGELAG--PVAKFLTDL-TNPLTEALQLENNDLVLFVA-DTLEVANAALGALRVRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A 
Sbjct: 408 AKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +   +  + F  +G S +    +FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKALQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR  MLL G +N+REV  FP +    D +  +PS VSV QL EL L++
Sbjct: 528 LGLDRFAMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578


>gi|229549691|ref|ZP_04438416.1| aspartyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255972389|ref|ZP_05422975.1| aspartyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|257422241|ref|ZP_05599231.1| aspartyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|312951290|ref|ZP_07770191.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|229305171|gb|EEN71167.1| aspartyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255963407|gb|EET95883.1| aspartyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|257164065|gb|EEU94025.1| aspartyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|310630726|gb|EFQ14009.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|315152596|gb|EFT96612.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315159884|gb|EFU03901.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0312]
          Length = 589

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/592 (40%), Positives = 350/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+ +   +EIA
Sbjct: 4   RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    +
Sbjct: 64  DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    EN+L  V +E + G  +S  F R+ YD+A+ RYG+DKPD R  + + +V
Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMSYDEAMARYGSDKPDTRFAMELIDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            E     +F+VF   L  N G+ V A+ AKG     +R   D + ++    G  GLA++ 
Sbjct: 302 AEVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK L  V+ E I    + + GD   F A  P    +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+    +    D  S+ A 
Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA
Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|325294844|ref|YP_004281358.1| aspartyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065292|gb|ADY73299.1| aspartyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 611

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 236/593 (39%), Positives = 349/593 (58%), Gaps = 13/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG++  SD+G  V+L+GWV   R HGG++F D+RD  G  Q+V +P+      E A
Sbjct: 26  RTSYCGEVSASDIGKKVKLAGWVDTTRDHGGVVFTDLRDRTGKIQIVFSPEISEELVEKA 85

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K ++ E+V+ I+G V  R + T N  + TG++E+ A+K++IL+ +  LP PV  + +  E
Sbjct: 86  KKLKDEYVVAIEGEVRRRPSGTENPKLKTGEVEVYAEKLKILNKSLPLPFPVDDDVKVGE 145

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLDLRR  +  NI+ R ++    R     E FIE  TP LT S+PEGARDFLV
Sbjct: 146 DIRLKYRFLDLRRKKMMDNIIFRHKLYQITRNVFNEEGFIEIETPFLTKSTPEGARDFLV 205

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDED R+DR P EF Q+D EMS
Sbjct: 206 PSRIYPGKFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEDLRADRQP-EFTQVDFEMS 264

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV + D++N  E VLR +++E             + YD+A+ R+GTD+PD R  + +  +
Sbjct: 265 FVREKDVMNIAEKVLRRLYKELLGIEI--GEIPVMSYDEAMSRFGTDRPDTRFGLELKEI 322

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+      F+VF ++++ N G  V AI  KGG   +R   D + ++    G  GLA+I  
Sbjct: 323 TDIAEKCSFKVF-RMVTENGGI-VKAINFKGGATLSRKEIDDLTKFVGIYGAKGLAWI-- 378

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++ + G      P+ K         I  RL+ + GD  FF+A  P    +  ++ R  + 
Sbjct: 379 KVTDKGL---QSPIVKFFTEGEINEILKRLEAEVGDILFFVADKPDVVNAALSNLRLKLG 435

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   +I+ +     WI+DFP +EWNE+E + +  H+PFT P+         D   ++A  
Sbjct: 436 KMADLIDDSKINVLWIVDFPMFEWNEDENRWEALHHPFTSPKEEDVEKLLEDPGKVRARA 495

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR +  ++  + F  +G+S E  + RFG L  A + G PPHGG+A 
Sbjct: 496 YDMVLNGVEVGGGSIRIYREDIQEKVFKVIGLSDEEAKERFGFLLEALKYGAPPHGGMAF 555

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR+  ++ G +++R+V  FP +Q    LL G+P TV  EQL EL + I + 
Sbjct: 556 GLDRLCAIMRGEESIRDVIAFPKTQRGQCLLTGAPDTVRPEQLEELHIEITKE 608


>gi|284929420|ref|YP_003421942.1| aspartyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809864|gb|ADB95561.1| aspartyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 587

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/585 (39%), Positives = 356/585 (60%), Gaps = 25/585 (4%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIAKSVRSEWVLCI 73
           D+G+ V L GWV R R HGG+IF+D+RDH GI Q+V++P  +S+ +E A+ +R+E+V+ I
Sbjct: 2   DLGTNVTLFGWVDRRRDHGGVIFIDLRDHTGIIQIVSDPKHNSSSYETAERLRNEYVIKI 61

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGERE--YPESIRFKYRF 130
            G V  R ++++N+ + TG+IE+ A  IEILSV  ++LP  + G  E    E  R +YR+
Sbjct: 62  IGKVSCRPSDSLNSKMKTGEIEIYADSIEILSVVNKKLPFSISGSEEELIKEETRLRYRY 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDLRR+ +  N+  R ++I ++R  +   +NFIE  TPILT S+PEGARD+LVPSRVN G
Sbjct: 122 LDLRREKMLSNLQLRHKVIKTIRHYLEDYQNFIEVETPILTRSTPEGARDYLVPSRVNFG 181

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            +YALPQ+PQ +KQLLM SGFDRY+Q+A CFRDED R+DR P EF QLDMEMSF+ +D+I
Sbjct: 182 QWYALPQSPQLFKQLLMVSGFDRYYQVARCFRDEDLRADRQP-EFTQLDMEMSFMSEDEI 240

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           L+  E ++  +F+   N   +S  F R+ Y   +  YGTD PD R  + + +V++   +S
Sbjct: 241 LDLNEGLICHIFKTIKNVE-LSRPFPRLTYQYVMENYGTDCPDTRFDLTLVDVSDILRNS 299

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARSQGQPGLAYIFWR 362
           +F+VFS+ +  +   +V  IP     GN A  +        + + A   G  G+ YI  R
Sbjct: 300 KFKVFSEAIKNSGSVKVLPIPE----GNSAISNVRIKSGGDLFQEAVESGSKGIVYI--R 353

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E   +  +G +  +L     + +  +   + G      AGD        +  R  I +
Sbjct: 354 VKEDSQIETIGAIKDNLTNEQKKDLLEKTGAKPGHLLLISAGDTALVNKSLSRLRLIIGK 413

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ++ +I+ N     W+ +FP +EWN +E++ +  H+PFT P         NDL + +A  Y
Sbjct: 414 QMNLIDKNKINLLWVTEFPLFEWNPDEQRFESLHHPFTCPNTS----DLNDLTTARAQAY 469

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL+ NG E+  G +R +  ++  + F  +G+S+E + N+F  +  AF+ G PPHGGIA G
Sbjct: 470 DLIFNGIEVGGGSLRIYQKDIQKKVFQTIGLSEEEIHNKFQFILDAFEYGAPPHGGIAYG 529

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           +DR++MLL   +++R+V  FP +Q    LL  SPS+V  +QL+EL
Sbjct: 530 LDRLIMLLAEEESIRDVIAFPKTQQASCLLTESPSSVDFKQLQEL 574


>gi|167750485|ref|ZP_02422612.1| hypothetical protein EUBSIR_01461 [Eubacterium siraeum DSM 15702]
 gi|167656636|gb|EDS00766.1| hypothetical protein EUBSIR_01461 [Eubacterium siraeum DSM 15702]
          Length = 592

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 235/592 (39%), Positives = 352/592 (59%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62
           RTH CG+  V  +GS V ++G+V RVR  G ++F+D+RD  GI Q+V +   + A FE A
Sbjct: 10  RTHYCGE--VEGIGSTVTVAGFVQRVRDKGSLMFVDLRDRTGIVQLVFDDTTEPAVFEKA 67

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K ++SE+VL   GL+  R  E+ N +I TG +E+    + ILS+A+  P  +  + +  E
Sbjct: 68  KQIKSEYVLMAQGLL--RERESKNNDIKTGNVEILVTDLRILSMAQTTPFEIVNDTKTNE 125

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  L  N++ R RI  + R       F+E  TP++  S+PEGARD+LV
Sbjct: 126 ELRLKYRYLDLRRKKLQDNLIMRHRIAKTAREYFYDNGFLEIETPMMMKSTPEGARDYLV 185

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQ+PQ YKQLLM SGFDRY Q+A CFRDED R+DR P EF Q+D+EMS
Sbjct: 186 PSRVHEGKFYALPQSPQIYKQLLMISGFDRYIQLARCFRDEDLRADRQP-EFTQIDLEMS 244

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++ D+IL   E  ++ + ++  + + ++    R+ Y+DA+ RYG+DKPD R  + + ++
Sbjct: 245 FMDVDEILELTEGFIKKLMKDVLDVD-ITTPLPRLTYNDAMSRYGSDKPDTRFGMEIQDL 303

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++    +EF VFS   ++  G  V AI AK   G   R   D++ E+++  G  GLAYI 
Sbjct: 304 SDIVKDTEFSVFSS--AIAAGGSVRAIVAKNAAGVLTRKEIDKLTEFSKGIGAKGLAYIR 361

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W  D++ N +     AK L     +AI   L  + GD    +A             R  +
Sbjct: 362 WH-DDAPNCS----FAKFLKEGELDAILSHLGCEKGDVVLIVADKNKVTLPVLGALRLKV 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +++GI+  + + F WI +FPF+EW++E +     H+PFTMP          D   ++A 
Sbjct: 417 GKQIGIVPDSGYNFLWITEFPFFEWDDESESWLAMHHPFTMPMEECLEYLDTDKGKVRAK 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+ SG IR    E+  + F  +G++ + +E +FG L  A++   PPHGG+ 
Sbjct: 477 AYDLVLNGIELCSGSIRITDPELQERMFRLLGLTDKEIEEKFGFLVDAYKYAAPPHGGLG 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+ MLL GA ++R+V  FP  ++  +L+   PS V  +QL EL +R V
Sbjct: 537 IGLDRLSMLLCGADSLRDVVAFPKVKDASELMSQCPSAVDDKQLEELHIRTV 588


>gi|49483875|ref|YP_041099.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|282904210|ref|ZP_06312098.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282906036|ref|ZP_06313891.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908949|ref|ZP_06316767.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911266|ref|ZP_06319068.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|283958390|ref|ZP_06375841.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|295428205|ref|ZP_06820837.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297590827|ref|ZP_06949465.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|56749412|sp|Q6GG73|SYD_STAAR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|49242004|emb|CAG40701.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|282324961|gb|EFB55271.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327213|gb|EFB57508.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331328|gb|EFB60842.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595828|gb|EFC00792.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790539|gb|EFC29356.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|295128563|gb|EFG58197.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575713|gb|EFH94429.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312437903|gb|ADQ76974.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315195532|gb|EFU25919.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 588

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/592 (40%), Positives = 348/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +IA
Sbjct: 4   RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +L+ V +E      ++  F R+ Y +A+RRYG+DKPD R  + + +
Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKG-VEINGAFPRMTYKEAMRRYGSDKPDTRFEMELID 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF   +  N G E+ AI AKG      R   D + E+    G  GLA++
Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+ +     N E +      + GD   F+A  P          R  
Sbjct: 360 --KVVEDGLT---GPIGRFFEAENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A
Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586


>gi|257095694|ref|YP_003169335.1| aspartyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257048218|gb|ACV37406.1| aspartyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 600

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/591 (41%), Positives = 354/591 (59%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RTH CG +    +G  V L GW HR R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 2   RTHYCGQVSARIIGQEVTLCGWAHRRRDHGGVIFVDLRDREGLAQVVCDPDRPLMFKTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVRSE+ L I G V +R   T+NANI +G++E+   ++EIL+ +   P  +  E    E+
Sbjct: 62  SVRSEFCLRIRGKVRARPEGTVNANIASGEVEILCHEMEILNPSLTPPFQLDDE-NLSEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR  +R LDLRR  + +N+  R +   + R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 IRLLHRVLDLRRPQMQQNMQLRYKTARAFRRFLDDAGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I+  ME ++R VF E + G+T+   F R+ Y +A+ RYG+DKPDLR  + + +VT
Sbjct: 240 MGEDEIIELMEELIRVVFRE-AIGSTLPKPFPRLPYGEAMDRYGSDKPDLRVTLELVDVT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +      F+VF+ + + + G  + A+   GG    R   D   ++    G  GLAYI   
Sbjct: 299 DALKDVSFKVFASVAN-SQGGRIAALRIPGGASLTRGEIDAYTQFVGIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                N  G+  P+ K+L+  + + I  R   Q GD  FF A D  K  + A  A R  I
Sbjct: 358 DATQLNENGLQSPIVKNLHPASLQTIVGRTGAQSGDLIFFGA-DKRKVVNDALGALRVKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             E G +N + +E  W++DFP ++++EE ++    H+PFT P+         D  S  A 
Sbjct: 417 GHEKGFLNGHAWEPVWVVDFPMFDYDEEARRWTACHHPFTSPKDEHLPRLETDPGSCLAK 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDL  NG E+  G +R H + V  + F  +GI +E  + +FG L  A + G PPHGG+A
Sbjct: 477 AYDLALNGSELGGGSVRIHQAAVQEKVFKALGIGEEEAQQKFGFLLDALKYGAPPHGGLA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DRIV +L GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+
Sbjct: 537 FGLDRIVTMLAGAESIRDVIAFPKTQRAQCLLTDAPSGVDDKQLRELHIRL 587


>gi|322379215|ref|ZP_08053606.1| aspartyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322379713|ref|ZP_08054026.1| aspartyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147862|gb|EFX42449.1| aspartyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148355|gb|EFX42864.1| aspartyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 602

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/594 (39%), Positives = 348/594 (58%), Gaps = 19/594 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT  C ++G+ D+   V+L GW H  R HGG+IF+D+RD  G+ Q+V +P+S  +E    
Sbjct: 22  RTQLCAEVGLVDLKKSVKLCGWCHNYRDHGGVIFIDLRDKSGLVQLVCDPNSKAYEQTSL 81

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR E VL ++G+V +R     N  + TGQIE+    + I S +   P+ + G+    E +
Sbjct: 82  VRHEDVLIVEGVVRAREKGLENPKLKTGQIEVVLSHLCIESKSLTPPISI-GDNSVNEDL 140

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLR    ++    R+++  ++R  + + +F+E  TP+L+ ++PEGARDFL+PS
Sbjct: 141 RLQYRYLDLRSTKAYEIFKMRSKVAKAVRDCLDSLDFLEIETPMLSKTTPEGARDFLIPS 200

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ G F+ALPQ+PQ +KQ+LM +G DRY+QI  CFRDED RSDR P EF Q+D+EMSF 
Sbjct: 201 RVHDGQFFALPQSPQLFKQILMVAGMDRYYQIVKCFRDEDLRSDRQP-EFTQIDVEMSFC 259

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            Q+D++   E +L+ VF     G  ++  F  + Y +A   YG+DKPDLR  + +  V +
Sbjct: 260 TQEDVIEVAETLLKAVFS--CVGVEITPPFKHLTYQEATESYGSDKPDLRFEMPLVEVGD 317

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            FV S   +F KI S +      A+  +GG    +R +     E+ R  G  GLAYI  +
Sbjct: 318 LFVDSSNEIFKKIASDSYNNRFKALRVEGGDRLLSRKYLSEAEEFVRQFGAKGLAYI--Q 375

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K ++    E +  R   + GD  FF AG+      +    R  + Q
Sbjct: 376 VKEEG---AKGPLVKFISEAALETLLKRTQAKVGDILFFGAGEKKVILDYMGRLRLKLGQ 432

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +I+   F F W++DFP +E  E E K+  AH+PFTMP+    +L+G     I++  Y
Sbjct: 433 DLNLIDSQAFNFLWVVDFPMFE--EVEGKLSAAHHPFTMPK----NLEGKP-TQIQSIAY 485

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H   +  + F  +GIS++  + +FG L  A Q G PPHGG A G
Sbjct: 486 DIVLNGVELGGGSIRIHKQAIQKEVFKILGISEQEAQEKFGFLLEALQYGAPPHGGFAMG 545

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            DR++MLL    ++R+V  FP +Q    LL  +PS+ S EQLREL +R+  NPK
Sbjct: 546 FDRLIMLLAKVPSIRDVIAFPKTQKATCLLSKAPSSASEEQLRELHIRL-RNPK 598


>gi|332364065|gb|EGJ41842.1| aspartate--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 584

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/591 (39%), Positives = 348/591 (58%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   EI   
Sbjct: 3   RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEIMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E +N  + TG +EL  + + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEYVIEVTGKVAAR--EQVNDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G  VS  F R+ YDDA+  YG DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA   W
Sbjct: 299 LTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G +AG  P+AK L  + ++     L +++ D   F+A D L+  + A  A R  +
Sbjct: 352 VKVADGELAG--PIAKFLTDLTSQLTEA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F + W++ +P +EW+EEE +   AH+PFT+PQ   E     DL  ++A 
Sbjct: 408 GKELDLIDPDTFNYLWVVGWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSPQEATEQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++
Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578


>gi|29376492|ref|NP_815646.1| aspartyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227519312|ref|ZP_03949361.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|257419651|ref|ZP_05596645.1| aspartyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|46577229|sp|Q833I2|SYD_ENTFA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|29343956|gb|AAO81716.1| aspartyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227073241|gb|EEI11204.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|257161479|gb|EEU91439.1| aspartyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|315574559|gb|EFU86750.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315581799|gb|EFU93990.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 589

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/592 (40%), Positives = 349/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+ +   +EIA
Sbjct: 4   RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    +
Sbjct: 64  DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    EN+L  V +E + G  +S  F R+ YD+A+ RYG+DKPD R  + + +V
Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMSYDEAMARYGSDKPDTRFAMELIDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            E     +F+VF   L  N G+ V A+ AKG     +R   D + ++    G  GLA++ 
Sbjct: 302 AEVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK L  V+ E I    + + GD   F A  P    +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+         D  S+ A 
Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVDRLATDPASVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA
Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|163791444|ref|ZP_02185853.1| aspartyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873308|gb|EDP67403.1| aspartyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 589

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/593 (39%), Positives = 349/593 (58%), Gaps = 14/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +    +G  + L GWV + R  G +IF+D+RD  GI Q+V NP        IA
Sbjct: 4   RTEYCGKVSRDLLGQEIVLKGWVQKRRDLGDLIFIDLRDREGIVQIVFNPTFSKEALAIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +RSE+VL I G V+ R+A  +N NI TG++E+    + +L+ ++  P  +       +
Sbjct: 64  EDIRSEFVLEIKGKVVERNAAVVNKNIPTGELEVEVYDVTVLNTSKTTPFYIEDGVAVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R +YR+LDLRR  + +N++ R ++  S+R  +   NFI+  TP LT S+PEGARD+LV
Sbjct: 124 DKRMQYRYLDLRRPEMTQNMILRHQMTKSIRHYLDDHNFIDTETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQ+LM +GFDRY+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVHPGHFYALPQSPQLFKQMLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+E ++I +  E +L  V ++ + G  ++  F R+ YD+AI RYG+DKPD+R  + + +V
Sbjct: 243 FLEPEEIQSFTEELLAKVLKD-TKGVELTLPFPRMGYDEAISRYGSDKPDVRFGLELVDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           +     S F+VFS   +V  G  V AI AKG   N  R   D + E+    G  GLA++ 
Sbjct: 302 SALVKDSSFKVFSG--AVENGGAVKAINAKGAASNYSRKDIDALGEFVSVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK     +  A+  ++  + GD   F+A             R+ +
Sbjct: 359 -KVEEDGL---KGPIAKFFKD-DAAALIEKMGAETGDLLLFVADQKSVVHDSLGALRSKL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + + F WI+D+P  E+++E K+   AH+PFTMP+     L   D   + A 
Sbjct: 414 GKELELIDESTYAFLWIVDWPLLEYDDEAKRYTAAHHPFTMPKESDIELLETDPGKVYAQ 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  ++  + F+ +G SKE  E +FG L  A + G PPHGGIA
Sbjct: 474 AYDIVLNGYELGGGSIRIHKRDLQEKMFAALGFSKEEAEEQFGFLLEALEYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR  MLL G +N+REV  FP +    D L  +PS VS  QL EL +   +
Sbjct: 534 LGLDRFAMLLAGKENIREVIAFPKNGKATDPLTSAPSIVSEAQLDELSIHTTK 586


>gi|257425754|ref|ZP_05602178.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428414|ref|ZP_05604812.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431052|ref|ZP_05607431.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433738|ref|ZP_05610096.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436653|ref|ZP_05612697.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282914435|ref|ZP_06322221.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282924728|ref|ZP_06332396.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|293503508|ref|ZP_06667355.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510526|ref|ZP_06669232.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293531067|ref|ZP_06671749.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|257271448|gb|EEV03594.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275255|gb|EEV06742.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278255|gb|EEV08897.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281831|gb|EEV11968.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284004|gb|EEV14127.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282313563|gb|EFB43958.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282321616|gb|EFB51941.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|290920335|gb|EFD97401.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095174|gb|EFE25439.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466890|gb|EFF09410.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
          Length = 588

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/592 (40%), Positives = 348/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +IA
Sbjct: 4   RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRHELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +L+ V +E      ++  F R+ Y +A+RRYG+DKPD R  + + +
Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKG-VEINGAFPRMTYKEAMRRYGSDKPDTRFEMELID 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF   +  N G E+ AI AKG      R   D + E+    G  GLA++
Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+ +     N E +      + GD   F+A  P          R  
Sbjct: 360 --KVVEDGLT---GPIGRFFEAENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A
Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586


>gi|307823991|ref|ZP_07654218.1| aspartyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307734775|gb|EFO05625.1| aspartyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 596

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/595 (38%), Positives = 356/595 (59%), Gaps = 7/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG+L    +G  V + GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 2   RTHKCGELNTQQLGETVSICGWVHRRRDHGGVIFIDLRDRAGLVQVVIDPDMADTFATAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVRSE+VL I GLV  R   T+NAN+ +G IE+ A+ I +L+ +E  P PV  E E  E 
Sbjct: 62  SVRSEYVLQITGLVRHRPEGTVNANMHSGAIEILAKDIVVLNESETPPFPVESEIEVNEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR++DLRR  + + +  R  +   +R  +    F E  TP LT ++PEGARD++VP
Sbjct: 122 LRLRYRYIDLRRTVMQEKMKVRRDVTRVLRNFLDDNEFFEIETPYLTKATPEGARDYIVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++ SF+ALPQ+PQ YKQ+LM +G DRY+Q+  CFRDED R+DR P EF QLD+E SF
Sbjct: 182 SRTHENSFFALPQSPQLYKQMLMVAGMDRYYQVVRCFRDEDLRADRQP-EFTQLDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++++I++ ME ++R +F +   G  + + F R+ + +A+ RYG D+PDLR P+ + ++ 
Sbjct: 241 MDENEIMHIMEEMIRQLFIKVI-GVNLGDKFPRMTHQEAVSRYGVDRPDLRIPLELVDIA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E     +F+VFS   +   G  V       G  +R   D + ++    G  GLAYI    
Sbjct: 300 EDMKDVDFKVFSAPANDPKGRVVAMRVPNAGDLSRKDIDALTKYVSIYGARGLAYIKVN- 358

Query: 364 DESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           D +  V G+  P+ K       +++  +   Q+GD  FF A             R  +  
Sbjct: 359 DLAAGVDGLQSPIVKFAPAEVWDSVLAKTGAQNGDLIFFGADKAGIVNEAMGALRVKLGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L ++  + ++  W++DFP ++W+E+ ++ +  H+PFT P   +E L  N   ++ +  Y
Sbjct: 419 DLNLLQGD-WKPVWVIDFPMFDWDEKSQRWNAIHHPFTAPSCSVEELVANPGAAL-SRAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+  G IR + + +       +GI ++    +FG L  A + G PPHGG+A G
Sbjct: 477 DLVLNGTEVGGGSIRINRTSMQQTVLEILGIGEDEAREKFGFLLDALKYGAPPHGGLAFG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VML+ G+ ++R+V  FP +Q+    L+ +P+ V+ EQL+ELG+R+++   K
Sbjct: 537 LDRLVMLMTGSTSIRDVIAFPKTQSAACPLVSAPAVVTDEQLKELGIRLIKPAGK 591


>gi|284100718|ref|ZP_06386006.1| aspartyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
 gi|283830374|gb|EFC34595.1| aspartyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
          Length = 565

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/576 (41%), Positives = 350/576 (60%), Gaps = 25/576 (4%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           GWVH  R HGG++F+D+RD +G+TQ+V     D A  E A  +R+E+V+   G V  R  
Sbjct: 2   GWVHGRRDHGGVLFIDVRDRFGVTQLVFDVEKDQATHEQANELRNEFVIAATGTVRLRPE 61

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
           ++IN  I TG+IE+    +E+L+ A   P  +  + +  E++R K+R+LDLRR  + + +
Sbjct: 62  DSINPQITTGEIEIQVGVLEVLNRAHTPPFLIEDDSQATEALRLKHRYLDLRRPPMQRLL 121

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202
             R  +    R  +    F+E  TPILT S+PEGARD+LVPSRVNQG+F+ALPQ+PQ +K
Sbjct: 122 ALRHDVTYRTRQFLHERRFLEIETPILTKSTPEGARDYLVPSRVNQGAFFALPQSPQLFK 181

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           Q+LM  G DRYFQIA CFRDED R DR P EF Q+D+EMSFVE+DD++N  E +LR V +
Sbjct: 182 QILMVGGADRYFQIARCFRDEDLRLDRQP-EFTQIDLEMSFVERDDVMNLTEELLRLVCK 240

Query: 263 EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNP 322
           E + G ++ + F R+ Y +A+ RYGTDKPD R  + +H++ E   H EF+VF    +V  
Sbjct: 241 E-TAGISLPSPFPRLTYQEAMSRYGTDKPDRRFGLELHDLNEVAKHVEFKVFRD--TVEK 297

Query: 323 GYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF----WRLDESGNVAGMGPVAK 377
           G +V  +  KGG    R+  DR+ E A+  G  GLA++     W+L+ +        +AK
Sbjct: 298 GGQVSGLVVKGGADIARSRIDRLIEVAKGFGAKGLAWVKIIEGWQLESA--------IAK 349

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
            L+    +  +   D   GD   F+A  P          R+++  EL +I+ + +E  W+
Sbjct: 350 FLDAALFQ--QALPDAGPGDLLLFVADKPAVTYEVLGRLRSYLGVELELIDHDRWEPVWV 407

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGG 495
            DFP +E++  E++    H+PFT P+  M+ L    +D L   A  YD+V NGFEI  G 
Sbjct: 408 TDFPMFEYDAAEQRYVALHHPFTSPR--MDDLPNLDSDPLHAHAQAYDVVLNGFEIGGGS 465

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           IR H SE+  + F  +GIS++  + +FG L  A + G PPHGGIA G+DR+VMLL  A++
Sbjct: 466 IRIHGSELQHKVFKLLGISRDAAQEKFGFLLDALEYGAPPHGGIALGLDRLVMLLGKAES 525

Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +REV  FP +Q    L+  +PS V   QL+ELG+++
Sbjct: 526 IREVIPFPKTQKVQCLMTEAPSDVGQTQLKELGIKL 561


>gi|62287555|sp|Q6FEH6|SYD_ACIAD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 592

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/599 (40%), Positives = 354/599 (59%), Gaps = 17/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
            VRSE+VL I G V  R   T N+N+++GQIE+  ++IE+L+ +E  P P+  +     E
Sbjct: 63  KVRSEFVLKITGRVRRRYEGTENSNMVSGQIEVLGKEIEVLAQSETPPFPLNDDNINISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLD+RR  +   +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EHRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E        + F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLNDDDIMDLMEGMTVKLFDELL--GIKFDKFQRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   + A+   G G   R+  D   ++    G  GLAYI  
Sbjct: 300 ADLMQDVEFKVFAGP-AKDPKGRIAALRVPGAGALPRSAIDEYTKFVGIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              E G      P+ K +  +  + +  R+  ++GD  FF   D  K  + A  A R  I
Sbjct: 359 NEIEKGVEGLQSPIVKFIEPIVMQLLE-RVGAENGDIVFF-GADKAKVVNDAMGALRVKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478
             +L ++ C  +   W++DFP +E  ++ K     H+PFT+P+  +E +K N  + LS+ 
Sbjct: 417 GHDLKLVTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEDVKANPGEALSVA 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG
Sbjct: 475 ---YDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DR++ML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PKK
Sbjct: 532 LAFGLDRLIMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQPKK 590


>gi|254449028|ref|ZP_05062482.1| aspartyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198261422|gb|EDY85713.1| aspartyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 592

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/589 (40%), Positives = 354/589 (60%), Gaps = 7/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  S +   V + GWVHR R HGG+IF+D+RDH G+ QVV +PD+   F  A+
Sbjct: 3   RSHYCGQVTESLLDQEVEVCGWVHRRRDHGGVIFVDLRDHTGLLQVVFDPDNPEMFAQAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+VL I G V  R   T+N N+ TGQ+E+ A ++E+L+ A   P  +  E +  E 
Sbjct: 63  RIRNEFVLKIKGRVRRRPEGTVNDNLPTGQVEVFALELEVLNAAATPPFQIDDE-DINED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR++DLRR  + + +  R ++ + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 122 NRLRYRYIDLRRPQMQERLRLRAKVSHFLRNFLEHNEFLDLETPMLTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 182 SRVHPGEFFALPQSPQLFKQLLMMSGMDRYYQIVRCFRDEDLRADRQP-EFTQLDIEMSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++DI+  ME ++ G+F+E + G  +  +F R+ Y +A+ R+G+DKPDLR  + + ++T
Sbjct: 241 IDEEDIMGLMEQMMVGLFKE-TMGVDLPASFERMPYAEAMERFGSDKPDLRIDLELISIT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G        +G   +R   D   ++    G  GLAYI    
Sbjct: 300 DLMKDVEFKVFSGPANDPKGRIAALRVPQGASISRKEIDDYTKFVSRYGAKGLAYIKCNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422
             +G      P+ K L      AI  R   QDGD  FF   D  K  + A  A R  + +
Sbjct: 360 VAAGREGLQSPILKFLPDEVVSAIIERTGAQDGDIVFF-GADKAKVVNDALGALRVKLGE 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+I    + F W++DFP +E++++E +    H+PFT P     +   +D  +  +  Y
Sbjct: 419 DLGLIQAG-WRFLWVVDFPMFEYDDKEGRYHALHHPFTAPLVDSPAALKDDAENALSRAY 477

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+  G IR H  E+   A   +GI ++  E +FG L  A + G PPHGGIA G
Sbjct: 478 DLVLNGTELGGGSIRIHTPEMQQAALDALGIDEQEAEEKFGFLLSALKYGCPPHGGIAFG 537

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR+VMLL GA ++R+V  FP +Q+   LL  +PS VS  QLREL +R+
Sbjct: 538 LDRMVMLLSGASSIRDVMAFPKTQSASCLLTEAPSAVSEAQLRELSIRL 586


>gi|323442834|gb|EGB00459.1| aspartyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 588

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/592 (40%), Positives = 348/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +IA
Sbjct: 4   RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +L+ V +E      ++  F R+ Y +A+RRYG+DKPD R  + + +
Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKG-VEINGAFPRMTYKEAMRRYGSDKPDTRFEMELID 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF   +  N G E+ AI AKG      R   D + E+    G  GLA++
Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+ +     N E +      + GD   F+A  P          R  
Sbjct: 360 --KVVEDGLT---GPIGRFFETENVETLLKLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A
Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI
Sbjct: 535 ALGLDRLVMLLTNKTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586


>gi|226945722|ref|YP_002800795.1| aspartyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511851|sp|C1DRG2|SYD_AZOVD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226720649|gb|ACO79820.1| aspartyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 591

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/595 (40%), Positives = 350/595 (58%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLEGQEVTLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRAETFAKAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R A  +N N+ +G IE+   ++++L+ AE  P P+    +  E 
Sbjct: 63  RVRSEYVVRITGKVRPRPAGAVNPNMASGAIEVLGYELDVLNQAETPPFPLDEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  +   +  R+ I +S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAAKLKLRSSITSSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI+   EN++R +F+E    +        + +++A+RRYG+DKPDLR P+ + +V 
Sbjct: 242 LDEADIMGITENMIRKLFKEVL--DVEFGELPHMTFEEAMRRYGSDKPDLRIPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   G     R+  D    +    G  GLAYI   
Sbjct: 300 DQLKAVEFKVFSGPAN-DPKGRVAALRVPGAASMPRSQIDDYTRFVGIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K +   N + I  R+   DGD  FF A D  K  S A  A R  + 
Sbjct: 359 ERAKGVEGLQSPIVKFIPKENLDVILDRVGAVDGDIVFFGA-DKAKIVSEALGALRIRLG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L ++ C  +   W++DFP +E N ++  +   H+PFT P+   E L  N  +++ +  
Sbjct: 418 HDLKLLTCE-WAPLWVVDFPMFEEN-DDGSLSALHHPFTAPKCTPEELAANPAVAL-SRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F  +GI +   + +FG L  A + G PPHGG+A 
Sbjct: 475 YDMVLNGTELGGGSIRIHRKEMQQAVFRILGIDEAEQQEKFGFLLDALKYGAPPHGGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA ++REV  FP +Q+   ++  +P  V  + LREL +R+ E PK
Sbjct: 535 GLDRLVMLMTGASSIREVIAFPKTQSAACVMTQAPGAVDAKALRELHIRLREQPK 589


>gi|283956054|ref|ZP_06373541.1| LOW QUALITY PROTEIN: aspartyl-tRNA synthetase [Campylobacter jejuni
           subsp. jejuni 1336]
 gi|283792374|gb|EFC31156.1| LOW QUALITY PROTEIN: aspartyl-tRNA synthetase [Campylobacter jejuni
           subsp. jejuni 1336]
          Length = 575

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/591 (40%), Positives = 348/591 (58%), Gaps = 22/591 (3%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIAKSVRSEW 69
           +G+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+ +    EIA + R+E+
Sbjct: 1   MGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIASNARNEF 60

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREYPESIRFK 127
           VL  +G +  R    +N  + TG+IE+   K   L++  E  +P F   +    E +R K
Sbjct: 61  VLIAEGAIRPRGEGLVNPKLKTGEIEVVVSK---LTIENESAVPPFAIADESVNEELRLK 117

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           YRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LVPSRV+
Sbjct: 118 YRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLVPSRVH 177

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMSF EQ 
Sbjct: 178 QGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMSFCEQK 236

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
           D++N  E  L+ +F+  + G  +   F ++ Y DA+  YG+DKPDLR  +   +V + F 
Sbjct: 237 DVINVAETFLKDIFK--ACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDLKFIDVIDIFA 294

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
            S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+I  ++ E
Sbjct: 295 KSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFI--QVKE 352

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G     GP+ K  +  +   +  R +++ GD  FF AG       +    R  +A EL 
Sbjct: 353 DG---LKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRIFLANELN 409

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           +I+ N  EF W++DFP +E N ++      H+PFTMP+   E+    DL  I +  YD+V
Sbjct: 410 LIDPNALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNINEA----DLEEISSIAYDVV 464

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
            NG E+  G IR H +++  + F  + I++E  + +FG L  A   G PPHGGIA G+DR
Sbjct: 465 LNGVELGGGSIRIHKNDIQQKVFKLLNINEEQQKEKFGFLLDALSFGAPPHGGIAIGLDR 524

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           ++ML+ GA ++REV  FP +Q    L+  +PS  + E +RELG+++ EN K
Sbjct: 525 LIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPANNEAMRELGIKLRENIK 575


>gi|313890356|ref|ZP_07823987.1| aspartate--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121199|gb|EFR44307.1| aspartate--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 582

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 235/593 (39%), Positives = 356/593 (60%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    ++   
Sbjct: 3   RSMYAGHVRSEHIGQELTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEDTNADVVKN 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++RSE+V+ + GLV  R  +  N  + TG +EL    + IL+ ++  P  +    E  
Sbjct: 63  AEAIRSEYVIEVQGLVQER--QQANNQLATGSVELKVTALTILNTSKTTPFEIKDAVEVG 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +   +FI+  TP+LT S+PEGARD+L
Sbjct: 121 DETRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLDFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V ++ + G  V   F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDLVEGMIAKVMKD-TKGVDVKLPFPRMAYDDAMNFYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T      +F+VFS+  +V    +   +  K    +R   D++ E+A+  G  GLA++  
Sbjct: 299 LTSLVKGLDFKVFSEAQAV----KAIVVKDKADQFSRKDIDKLTEFAKQFGAKGLAWV-- 352

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              +  N +  GPVAK L  V+ +     L + D D   F+A D L   +    A RN +
Sbjct: 353 ---KKVNDSLTGPVAKFLTEVDNDLTEA-LQLVDNDLILFVA-DELAIANNTLGALRNRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP--QGGMESLKGNDLLSIK 478
           A+EL +I+ N F F W++D+P +EW+EEE +   AH+PFT+P  +  +E L+G DL  ++
Sbjct: 408 AKELDLIDNNKFNFLWVVDWPMFEWSEEENRYMSAHHPFTLPTEESALE-LEG-DLTKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G +KE    +FG L  A   G PPHGG
Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKDMQERMFKALGFTKEDANEQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L++
Sbjct: 526 LAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSDKQLDELSLQV 578


>gi|50083844|ref|YP_045354.1| aspartyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|49529820|emb|CAG67532.1| aspartyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 612

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/599 (40%), Positives = 354/599 (59%), Gaps = 17/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 23  RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 82

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
            VRSE+VL I G V  R   T N+N+++GQIE+  ++IE+L+ +E  P P+  +     E
Sbjct: 83  KVRSEFVLKITGRVRRRYEGTENSNMVSGQIEVLGKEIEVLAQSETPPFPLNDDNINISE 142

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLD+RR  +   +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 143 EHRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 202

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 203 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 261

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E        + F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 262 FLNDDDIMDLMEGMTVKLFDELL--GIKFDKFQRMPYSEAMRDYASDKPDLRIPLKLVDV 319

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   + A+   G G   R+  D   ++    G  GLAYI  
Sbjct: 320 ADLMQDVEFKVFAGP-AKDPKGRIAALRVPGAGALPRSAIDEYTKFVGIYGAKGLAYIKV 378

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              E G      P+ K +  +  + +  R+  ++GD  FF   D  K  + A  A R  I
Sbjct: 379 NEIEKGVEGLQSPIVKFIEPIVMQLLE-RVGAENGDIVFF-GADKAKVVNDAMGALRVKI 436

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478
             +L ++ C  +   W++DFP +E  ++ K     H+PFT+P+  +E +K N  + LS+ 
Sbjct: 437 GHDLKLVTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEDVKANPGEALSVA 494

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG
Sbjct: 495 ---YDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 551

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DR++ML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PKK
Sbjct: 552 LAFGLDRLIMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQPKK 610


>gi|323440817|gb|EGA98526.1| aspartyl-tRNA synthetase [Staphylococcus aureus O11]
          Length = 588

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/592 (40%), Positives = 348/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +IA
Sbjct: 4   RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +L+ V +E      ++  F R+ Y +A+RRYG+DKPD R  + + +
Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKG-VEINGAFPRMTYKEAMRRYGSDKPDTRFEMELID 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF   +  N G E+ AI AKG      R   D + E+    G  GLA++
Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+ +     N E +      + GD   F+A  P          R  
Sbjct: 360 --KVVEDGLT---GPIGRFFETENVETLLKLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A
Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586


>gi|332523744|ref|ZP_08399996.1| aspartate--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332315008|gb|EGJ27993.1| aspartate--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 582

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 231/594 (38%), Positives = 356/594 (59%), Gaps = 25/594 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    ++   
Sbjct: 3   RSMYAGHVRSEHIGQELTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEETNADVVKN 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++RSE+V+ + G+V  R  +  N  + TG +EL   ++ IL+ ++  P  +    E  
Sbjct: 63  AEAIRSEYVIEVQGVVQER--QQANDQLATGSVELKVTELTILNTSKTTPFEIKDAVEVG 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +   +FI+  TP+LT S+PEGARD+L
Sbjct: 121 DETRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLDFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V ++ + G  V   F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDLVEGMIAKVMKD-TKGIDVKLPFPRMSYDDAMNFYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F+VFS+     P  +   +  K    +R   D++ E+A+  G  GLA++  
Sbjct: 299 LTQLVKDVDFKVFSEA----PAVKAIVVKDKADQFSRKDIDKLTEFAKQFGAKGLAWV-- 352

Query: 362 RLDESGNVAGM--GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
                  V G+  GPVAK L  +++      L + D D   F+A D L   +    A RN
Sbjct: 353 -----KKVDGLLAGPVAKFLTEIDSRLTEA-LHITDNDLILFVA-DELTIANNTLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSI 477
            +A+ELG+I+   F F W++D+P +EW+EEE +   AH+PFT+P +   + L+G DL  +
Sbjct: 406 RLAKELGLIDNKKFNFLWVVDWPMFEWSEEEDRYMSAHHPFTLPTEASAKELEG-DLAKV 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  ++  + F  +G +++    +FG L  A   G PPHG
Sbjct: 465 RAVAYDIVLNGYELGGGSLRINHRDMQERMFKALGFTRDAANEQFGFLLEAMDYGFPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L++
Sbjct: 525 GLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSDKQLDELSLQV 578


>gi|259046696|ref|ZP_05737097.1| aspartate--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036592|gb|EEW37847.1| aspartate--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 587

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/594 (40%), Positives = 350/594 (58%), Gaps = 16/594 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
           + RT  CG +    VG  V L GWV + R HGG+IF+D+RD  GI QVV NP  +   FE
Sbjct: 4   KRRTEYCGLISEKLVGQTVTLDGWVAKRRDHGGVIFIDLRDREGIMQVVFNPARNQEAFE 63

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA+ +RSE+V+ + G V  R     N N+ TG+ EL   ++E+ S A+  P+ +  E++ 
Sbjct: 64  IAEKLRSEYVIQVTGEVAYRGEGLENPNLKTGKFELLVDEVEVFSKAKTSPIYIDDEQKP 123

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR  + +N+  R +   S+R  +  E +I+  TPIL  S+PEGARD+
Sbjct: 124 SEELRLKYRYLDIRRRPVLENLRLRHKTTKSIREYLDGEGYIDVETPILAKSTPEGARDY 183

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++GSFYALPQ+PQ +KQLLM +G DRY+QI  CFRDED R DR P EF Q+D+E
Sbjct: 184 LVPSRVHEGSFYALPQSPQTFKQLLMGAGLDRYYQIVRCFRDEDLRGDRQP-EFTQVDIE 242

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  ++I   ME +L+ V ++  +   V   F RI + +A+ RYG DKPD R  + + 
Sbjct: 243 TSFLSAEEIQEMMEGLLKKVMKDTLDVE-VQTPFPRISFAEAMARYGNDKPDTRFDLELI 301

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V++    S+ +VFS    +  G EV  +  KG     +R   D + ++    G  GLA+
Sbjct: 302 DVSDIMKESDLKVFSS--CIENGGEVKVLNLKGLADEYSRKDADSLADFVAKFGAKGLAW 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTE-AIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           I  +++E G     GP+AK   IVN E A R R++ + GD  FF A  P       ++ R
Sbjct: 360 I--KVEEDGL---KGPIAKF--IVNQESAFRERINAEVGDIVFFCADKPSVVAQSLSELR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            H  ++  +I+ N F F W++D+P  E + EE +    H+PFT P         +D    
Sbjct: 413 LHFGKKHNLIDTNKFNFLWVVDWPLLEHDAEEDRYVAMHHPFTRPVSEDFQALIDDPAGA 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA  YD+V NG+E+  G +R +   +    F  +G +KE  E++FG L  A   G PPHG
Sbjct: 473 KAQAYDIVLNGYELGGGSLRIYRRNMQEAMFKVLGFTKESAESQFGFLLDALDYGFPPHG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DR+VMLL G  N+REV  FP + +  D +  +PS VS +QL EL L+I
Sbjct: 533 GIALGLDRLVMLLAGEDNIREVIAFPKNSSAVDPMTQAPSEVSAKQLDELSLKI 586


>gi|302871213|ref|YP_003839849.1| aspartyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574072|gb|ADL41863.1| aspartyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 594

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 241/591 (40%), Positives = 347/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG++ + DVG  V L+GWV   R  GGIIF+D+RD  GI QVV +        + A
Sbjct: 9   RTKYCGEVSLEDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+RSE+ + I G+V  R  ETIN  I TG++E+ AQ++ I S +E  P P+       E
Sbjct: 69  DSLRSEYCIGIRGIVEKRPPETINPKIKTGEVEVRAQELRIFSKSETPPFPIEEGINVNE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + KN++ R ++   +R  +    FIE  TP+LT S+PEGARD+LV
Sbjct: 129 AVRLKYRYLDLRRPDMQKNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQ +KQLLM +GFDRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 189 PSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ DD++   E +L+ +F E   G  +     R+ Y +A+ R+G+DKPD R  + + N+
Sbjct: 248 FVDVDDVIEINERLLQTIFGEML-GIDLKLPLPRLTYKEAMERFGSDKPDTRFGMELVNL 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
           T+   + EF+VF+   + N G  V AI AKG     +R   D + E+A++ G  GLA+I 
Sbjct: 307 TDIAKNCEFKVFAD--AANKGGSVRAINAKGCAITFSRREIDALVEYAKNFGAKGLAWIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D         P+ K L       I  RL  + GD   F A           + R  I
Sbjct: 365 VESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKDEIVFDVLGNIRLEI 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +++ + F   W+ +FP +E++EEE +    H+PFT P          D   +++ 
Sbjct: 420 ARKLNLLDKSKFNLLWVTEFPLFEYSEEEGRYVAKHHPFTSPMDEDIEFLETDPAKVRSK 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H +E+  + F  +G ++E  ++RFG L  AF+ G PPHGGIA
Sbjct: 480 AYDIVLNGTEIGGGSIRIHSTELQKRMFKALGFTEERAQDRFGFLLEAFKYGTPPHGGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G DR+ MLLLG  ++R+   FP  ++    L  +PS V  +QLREL +++
Sbjct: 540 YGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590


>gi|317502044|ref|ZP_07960226.1| aspartate-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331090440|ref|ZP_08339321.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316896518|gb|EFV18607.1| aspartate-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330401187|gb|EGG80780.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 597

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 241/597 (40%), Positives = 349/597 (58%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH CG+L  ++ G  V + GWV + R  GG++F+D+RD  GI QVV      D+A  E 
Sbjct: 10  RTHRCGELSAANAGEKVTIMGWVQKNRNKGGLVFVDVRDRSGIIQVVCEEGKTDAALIEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+V+ I G V  RS   +N  I TG+IE+   ++ ILS A   P P+    +  
Sbjct: 70  AAGLRSEYVVAIVGEVAMRSG-AVNDKIATGEIEVIPSELRILSEALTPPFPIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L +N++ +++++   R     E F+E  TP+L  S+PEGARD+L
Sbjct: 129 EEVRLKYRYLDLRRADLQRNLMMKSQVMTLTRQFFSEEGFLEVETPVLGKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ GSFY LPQ+PQ YKQLLM SGFDRY QIA CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGSFYGLPQSPQLYKQLLMCSGFDRYIQIARCFRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ D++++  E  L  VF+E   G  V     R+ + +A+ R+G+DKPDLR  + + +
Sbjct: 248 SFVDVDEVIDVNERYLARVFKEVL-GVDVPLPIQRMTWQEAMDRFGSDKPDLRFGMELTD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           VT+   +  F VF+   +V  G  V  I AKG GG  R   D++  + +  G  GLAYI 
Sbjct: 307 VTDVVKNCGFSVFTG--AVENGGSVRGINAKGQGGMPRKKIDKLTAFVKDYGAKGLAYI- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G++      AK +     +A+   +  + GD   F A             R  +
Sbjct: 364 -AIQEDGSIK--SSFAKFMTEEEMDALIKAMGAEAGDLLLFAADKNKVVWDSLGALRVEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +++ N F F WI +FP  EW+EE+ +    H+PFTMP      L  +D   ++A 
Sbjct: 421 AKQLELLDKNEFRFVWITEFPLLEWSEEQNRYVAMHHPFTMPMEEDLPLIDSDPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R    ++  + F  +G +KE   ++FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIFQDDIQEKMFEVLGFTKEQAYSQFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML+    ++R+V  FP  ++   L+  +PS V V+QL ELGL      +K
Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASCLMTEAPSVVDVKQLNELGLETTAETEK 597


>gi|187735889|ref|YP_001878001.1| aspartyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187425941|gb|ACD05220.1| aspartyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 597

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/608 (39%), Positives = 366/608 (60%), Gaps = 22/608 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M+ YRTH+C +L  +++G    L GWV  VR HGG+IF+D+RD  GITQVV +P+     
Sbjct: 1   MNSYRTHTCSELRAANIGKPTTLIGWVDSVRDHGGVIFIDLRDRSGITQVVFHPEVNQDV 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSR----SAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            + ++ +RSE ++ I G V +R    + +T NA++ TG+IE+SA  + +++ A+ LP  +
Sbjct: 61  AKASQQLRSEDMIQISGTVAARLKTDTVDTTNADLPTGEIEVSADTLNVINKADVLPFQL 120

Query: 115 FGEREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             +R    E +R KYRFLDLRR T+ +N+  R R+  S R  +    F+E  TPIL+ S+
Sbjct: 121 --DRALSNEDLRLKYRFLDLRRPTMARNMQIRHRVTKSTRDYLDEHGFLEIETPILSKST 178

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           PEGARDFLVPSR+  G FYALPQAPQQYKQLLM +G +RYFQIA CFRDED R+DR P E
Sbjct: 179 PEGARDFLVPSRLAPGKFYALPQAPQQYKQLLMVAGMERYFQIARCFRDEDLRADRQP-E 237

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F Q+D+E SF+  +DI N +E +L+ V++E S G  +   F R+ + +A+ +YG+DKP+ 
Sbjct: 238 FTQVDIEASFITPEDIYNLVEGLLKRVYKE-SLGVDIPTPFPRMTWKEAMDQYGSDKPER 296

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQG 352
           R  + + +V+  F +S F+VF+   +V+ G  V AI AKG G  +    D + + A   G
Sbjct: 297 RFGMKLTDVSSIFENSGFKVFAS--AVSNGGVVKAINAKGFGSASVGQIDALTKTAVEAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
             GLAYI  R ++        P++K L+    + +   LD++ GD   F AG     C  
Sbjct: 355 AKGLAYIKVREED-----WRSPISKFLSDEEKQKLTEALDIETGDLVLFAAGPWEPSCDI 409

Query: 413 AADARNHIAQELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP--QGGMESL 469
               R   A+ + ++  N   +F W+++FP   W+EEE++    H+PFT P  +   + L
Sbjct: 410 LGRVRLQCAEFMELLKDNKERDFLWVIEFPLVGWDEEEQRWVAIHHPFTRPVKEDEQKLL 469

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
            G     ++A  YD+V NG E+  G IR H  ++    F  +GI++E    +FG +  AF
Sbjct: 470 SGELSADLRAQAYDVVLNGTELGGGSIRIHERDLQSAMFKALGITEEQAREQFGHILDAF 529

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
             G PPHGG+A G+DR+VM++  A+++REV  FP +    DL+  SP+     QLR++ +
Sbjct: 530 SFGAPPHGGLALGLDRLVMMICNAESIREVIAFPKNNRGADLMSDSPAAAEDRQLRDIHI 589

Query: 590 RIVENPKK 597
           ++    KK
Sbjct: 590 QVKLPAKK 597


>gi|170723163|ref|YP_001750851.1| aspartyl-tRNA synthetase [Pseudomonas putida W619]
 gi|229470564|sp|B1JD74|SYD_PSEPW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169761166|gb|ACA74482.1| aspartyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 591

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/596 (41%), Positives = 354/596 (59%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRAETFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R    +NAN+ +G IE+   ++ +L+ AE  P P+    +  E 
Sbjct: 63  RVRSEYVVQITGKVRKRPDGAVNANMASGAIEILGYQLNVLNEAETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R +YRF+DLRR  +   +  R+RI +S+R R + EN F++  TPILT ++PEGARD+LV
Sbjct: 123 TRLRYRFIDLRRPEMADKLRLRSRITSSIR-RFLDENGFLDVETPILTRATPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 182 PSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++ +I+   E+++R +F+E  +       F  + +++A+RRYG+DKPDLRNP+ + +V
Sbjct: 241 FLDESEIMGLTESMIRKLFKEVLDLEF--GEFPHMTFEEAMRRYGSDKPDLRNPLELVDV 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     +F+VF+   + +P   V A+   GG    R+  D   ++    G  GLAYI  
Sbjct: 299 ADQLKDVDFKVFAGPAN-DPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGARGLAYIKV 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G      P+ K++   N   I  R+   DGD  FF A D  K  S A  A R  +
Sbjct: 358 NERAKGVEGLQSPIVKNIPEANLNVILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIRL 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +  ++ C  +   W++DFP +E N E+      H+PFT P+   E L+ N   ++ + 
Sbjct: 417 GHDFELLTCE-WAPMWVVDFPMFEEN-EDGSFTALHHPFTAPKCTPEELEANPATAL-SR 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  E+    F  +GI     E +FG L  A + G PPHGG+A
Sbjct: 474 AYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIEAAEQEEKFGFLLDALKFGAPPHGGLA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VML+ GA+++REV  FP +Q+   ++  +P  V  + LREL +R+ E  K
Sbjct: 534 FGLDRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGLVDAKALRELHIRLREQTK 589


>gi|324989681|gb|EGC21625.1| aspartate--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 584

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/596 (39%), Positives = 349/596 (58%), Gaps = 19/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEIVAAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G  VS  F R+ YDDA+  YG DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVSLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++  
Sbjct: 299 LTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV-- 352

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              +  +    GPVAK L  + ++     L +++ D   F+A D L+  + A  A R  +
Sbjct: 353 ---KVADGELTGPVAKFLTDLTSQLTEA-LQLENNDLVLFVA-DTLEVANAALGALRVRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A 
Sbjct: 408 GKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSPQEATEQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++  + K
Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQVEAHEK 583


>gi|224418231|ref|ZP_03656237.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827556|ref|ZP_04870441.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313141764|ref|ZP_07803957.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510962|gb|EES89621.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313130795|gb|EFR48412.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 583

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/596 (39%), Positives = 347/596 (58%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H C  L   D+G  V L GW +  R HGGIIF+D+RD  GI Q+V +P  +    +IA
Sbjct: 2   RSHYCTGLDEKDIGKEVTLCGWCNTYRDHGGIIFIDLRDRSGIVQLVFDPKDSQQAHKIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL   G V  R     N  + TG+IE+   ++ I + +   P+ V G+    E
Sbjct: 62  SEVRDEYVLVAKGKVRKRGEGLENPKLKTGKIEVLIDELNIENKSLTPPIAV-GDESVGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   L +  + R+++  ++R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 DVRLKYRYLDLRNPRLQEIFITRSKVAQAVRNSLSHLGFLEIETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R DR P EF Q+D+EMS
Sbjct: 181 PSRVHHGEFYALPQSPQLFKQLLMVSGFDKYFQIAKCFRDEDLRLDRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++   E VL+ +F   + G ++   F    Y++ + +YG+DKPDLR  + +  V
Sbjct: 240 FCEQKDVIGVAEEVLKSIFA--ACGISIQMPFPHYTYNEVMEKYGSDKPDLRYELPLVEV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            + F+ S   +F+ I   +      A+  KGG    +R       E+ R  G  GLAY+ 
Sbjct: 298 GDLFIDSTNEIFATIAKDSKKNRFKALCVKGGDNFFSRKTLGEAEEFVRKFGAKGLAYL- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ E G     GP+ K +   N + +  R+    GD  FF AG       +    R  +
Sbjct: 357 -QIKEEGI---KGPLVKFIKEENLKTLLDRVGASVGDIIFFGAGAKKVVWDYMGRLRQKV 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ++G+I+ + ++F W++DFP +E N ++  I   H+PFTMP+    +L+  D+  I + 
Sbjct: 413 ASDMGMIDESVYQFLWVVDFPMFERN-DDGSISALHHPFTMPK----NLEVQDIEEINSV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NGFEI  G IR H  E+  + F  +GIS++  +++F  L  A Q G PPHGGIA
Sbjct: 468 AYDVVLNGFEIGGGSIRIHKQEIQSKVFELLGISQKEAQDKFSFLLEALQFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DRI+MLL  A ++R+V  FP +Q     L  +PS  + EQLREL +++ E  K
Sbjct: 528 FGLDRIIMLLCKAHSIRDVIAFPKTQKATCPLTEAPSPANEEQLRELHIKVRETKK 583


>gi|237734562|ref|ZP_04565043.1| aspartyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382382|gb|EEO32473.1| aspartyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 587

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 236/600 (39%), Positives = 356/600 (59%), Gaps = 16/600 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+  RTH+ G+L +SDV   V L GWV + R  G ++F+D+RD YGITQ+V N +     
Sbjct: 1   MYMNRTHNNGELRISDVNKIVELKGWVAKKRNLGSLVFIDLRDRYGITQIVLNEEMEA-- 58

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + K +++E+VL + G V+ RS++  N N+ TG IE+ A +I+I++ A+  P+    + + 
Sbjct: 59  LGKDIKNEYVLHVVGKVIERSSK--NPNMPTGDIEIEAAQIDIINTAKVTPIYTTDDTDA 116

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR+LDLRR  +   I+ R +I +S+R  +    FI+  TP L  S+PEGARDF
Sbjct: 117 SEDARMQYRYLDLRRPVMQNKIIMRHKITSSIRNFLDNHEFIDIETPYLNRSTPEGARDF 176

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFYALPQ+PQ +KQLLM SGF+RY+QIA CFRDED R DR P EF Q+D+E
Sbjct: 177 LVPSRVHNGSFYALPQSPQLFKQLLMVSGFERYYQIARCFRDEDLRLDRQP-EFTQVDVE 235

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+  D+I++  E +L  V ++   G  +     R+ + +A+ +YG DKPD+R  + + 
Sbjct: 236 MSFMTTDEIISIGEQLLAQVMKDVK-GIELQLPLPRMTWHEAMEKYGIDKPDIRFGLELV 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAY 358
           N+ E     EF VF   L  + G+ V  I  KG   N  R   D++ +  ++    GLA 
Sbjct: 295 NLNEVVKDVEFMVFKSALEAD-GH-VKGINVKGEADNFSRKAIDKLTDVVKTYKAKGLA- 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADAR 417
             W   ++G     GP+AK  N      +   +D  D D   F++       C   A  R
Sbjct: 352 --WLKVKAGKAE--GPIAKFFNEEQMTKLLKAMDASDNDLLLFVSDAKYNVVCDALAALR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           NH+ +EL + N + F F W++DFP +E+++E ++    H+PFT P+        ND  + 
Sbjct: 408 NHLGKELKLFNPDEFAFLWVVDFPMFEYDDETERYYAVHHPFTRPKDSDIDKIENDPANC 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NGFE+  G  R +  E+  +AF  +G ++E ++++FG    AFQ G PPHG
Sbjct: 468 LADAYDIVLNGFELGGGSQRIYEQELQERAFRALGFTQERIDSQFGWFVEAFQYGTPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G A G+DR+ MLL G++N+REV  FP + +    +  +PS V   QL ELG+ ++E+ ++
Sbjct: 528 GFALGLDRLAMLLTGSENIREVIAFPKNASAVCPMSKAPSEVDNAQLEELGIAVIEDEQE 587


>gi|282919404|ref|ZP_06327139.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282317214|gb|EFB47588.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
          Length = 588

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/592 (40%), Positives = 347/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +IA
Sbjct: 4   RTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +L+ V +E      ++  F R+ Y +A+RRYG+DKPD R  + + +
Sbjct: 243 SFVDQEDVMQMGEEMLKKVVKEVKG-VEINGAFPRMTYKEAMRRYGSDKPDTRFEMELID 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF   +  N G E+ AI AKG      R   D + E+    G  GLA +
Sbjct: 302 VSQLGRDMDFKVFKDTVE-NDG-EIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLARV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+ +     N E +      + GD   F+A  P          R  
Sbjct: 360 --KVVEDGLT---GPIGRFFEAENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A
Sbjct: 415 LAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRI 586


>gi|327463737|gb|EGF10053.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 584

 Score =  432 bits (1110), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/591 (39%), Positives = 347/591 (58%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRIHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G  V   F R+ YDDA+  YG DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVKLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA   W
Sbjct: 299 LTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G +AG  P+AK L  + T  +   L +++ D   F+A D L+  + A  A R  +
Sbjct: 352 VKVIDGELAG--PIAKFLTDL-TSPLTETLQLENNDLVLFVA-DTLEVANAALGALRVRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A 
Sbjct: 408 GKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++
Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578


>gi|305433173|ref|ZP_07402329.1| aspartate--tRNA ligase [Campylobacter coli JV20]
 gi|304443874|gb|EFM36531.1| aspartate--tRNA ligase [Campylobacter coli JV20]
          Length = 583

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 242/598 (40%), Positives = 349/598 (58%), Gaps = 22/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H   DL  + +G  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+ +    EIA
Sbjct: 2   RSHYNTDLNSTHIGEVVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREY 120
              R+E+VL  +G +  R     N  + TG+IE+   K   L +  E  +P FG  +   
Sbjct: 62  SRTRNEFVLIAEGKIRPRGEGLTNPKLKTGEIEVVVSK---LIIENESAVPPFGIGDESV 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 179 LVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF EQ D++ T E  L+ +F+  + G  +   F ++ Y +A+  YG+DKPDLR  + + 
Sbjct: 238 MSFCEQKDVIATAETFLKDIFK--ACGKEIQIPFRQMPYKEAMENYGSDKPDLRFDLKLI 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V + F  S   +F+ I   +    V A+    G    ++    R  E+ R  G  GLA+
Sbjct: 296 DVIDIFAKSNNEIFANIAKDSKKNRVKALRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAF 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  ++ E G     GP+ K  N  +   +  R +++ GD  FF AG       +    R 
Sbjct: 356 I--QVKEDG---LKGPLCKFFNEEDLNELIKRCELEVGDVVFFGAGVKKTVLDYMGRFRI 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A EL +IN +  EF W++DFP +E N ++      H+PFTMP+   E+    DL  I 
Sbjct: 411 FLAGELNLINPDALEFLWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDEA----DLEEIS 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGG
Sbjct: 466 SIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 526 IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSAASNETMRELGIKLRENIK 583


>gi|315157281|gb|EFU01298.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0043]
          Length = 589

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/592 (40%), Positives = 349/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+ +   +EIA
Sbjct: 4   RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    +
Sbjct: 64  DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    EN+L  V +E + G  +   F R+ YD+A+ RYG+DKPD R  + + +V
Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEIPVPFPRMSYDEAMARYGSDKPDTRFAMELIDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            E     +F+VF   L  N G+ V A+ AKG     +R   D + ++    G  GLA++ 
Sbjct: 302 AEVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK L  V+ E I    + + GD   F A  P    +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+    +    D  S+ A 
Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA
Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|299822823|ref|ZP_07054709.1| aspartate--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816352|gb|EFI83590.1| aspartate--tRNA ligase [Listeria grayi DSM 20601]
          Length = 592

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/599 (39%), Positives = 351/599 (58%), Gaps = 13/599 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FE 60
           + RT  CG +   D+   V L GWV + R  GG+IF+D+RD  GI QVV NP ++     
Sbjct: 2   KKRTTYCGQVSEQDIDKKVILHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPANSADALA 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +R+E+V+ ++G V +RS   +N  I TG++E+ A+ I IL+ ++  P  +      
Sbjct: 62  VAEKIRNEFVVTVEGTVAARSESAVNDKIATGKVEVLAESITILNSSKTPPFYIEDGVNV 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  +++    R  +  + R ++    F++  TP LT S+PEGARD+
Sbjct: 122 ADELRLKYRYLDLRRPEMNQIFRMRHLVTQTFRDKLNELGFLDIETPYLTKSTPEGARDY 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  GSFYALPQ+PQ  KQLLM++GFD+Y+QI  CFRDED R DR P EF Q+D+E
Sbjct: 182 LVPSRVYPGSFYALPQSPQIMKQLLMSAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ +++I   ME +L  V +    G  +   F R+ Y +A+ RYG DKPD+R  + + 
Sbjct: 241 TSFLSKEEIQTIMEEMLAAVVKNV-KGIEIERPFRRMTYTEAMDRYGIDKPDIRFGLELK 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAY 358
           +V+      +F+VF+   ++  G +V AI AK   GN  R   D +  +A + G  GLA 
Sbjct: 300 DVSPIVKDVDFKVFTG--AIENGGQVKAINAKKAAGNYSRKDIDALGAFAANYGAKGLA- 356

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
             W   E+G +   GP+AK  +     A++  L+++DGD   F+A       +  A  RN
Sbjct: 357 --WLKAEAGELK--GPIAKFFDADKQTALKEILEVEDGDLLLFVADKKDVVAASLAALRN 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +ELG+I+ +   F WI D+P +E++EE  +   AH+PFT+PQ    +L  +      
Sbjct: 413 KLGKELGLIDEDELAFIWITDWPLFEYDEEAGRFVSAHHPFTLPQEDDIALLESAPEKAM 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  +V  + F  +G S E ++ +FG L  A + G PPHGG
Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYQKDVQEKMFRALGFSDEAMQEQFGFLLEALEYGFPPHGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           IA G+DRIVM+L    N+R+   FP + +  D L  +P TVS  QL EL L + +   K
Sbjct: 533 IALGLDRIVMILAKRTNLRDTIAFPKTGSASDPLTNAPDTVSDAQLHELELVVEKKEAK 591


>gi|254478006|ref|ZP_05091390.1| aspartyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
 gi|214036010|gb|EEB76700.1| aspartyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
          Length = 613

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/590 (40%), Positives = 357/590 (60%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG+L V DVG  V + GWV+  R HGG++F+D+RD  GI Q+V +   +   FE  
Sbjct: 32  RTHMCGELTVEDVGKSVVVMGWVNSRRDHGGLVFIDLRDRTGIVQIVFSEQVSKEAFEKV 91

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +SVRSE+VL ++G V+ R  E +N  I TG+IE+ A+ ++ILS +E  P P+       E
Sbjct: 92  QSVRSEYVLAVEGEVVKRLPENVNPKIPTGEIEIYAKNLKILSKSETPPFPIEDRSNVSE 151

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR ++ +N++ R ++  ++R  +    FIE  TP+L  S+PEGARD+LV
Sbjct: 152 AVRLKYRYLDLRRPSMQRNLITRFKLTQAVREFLNDNGFIEIETPMLIKSTPEGARDYLV 211

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQLLM +GFDRY+QIA C RDED R+DR P EF Q+D+EMS
Sbjct: 212 PSRIYPGKFYALPQSPQIFKQLLMIAGFDRYYQIARCLRDEDLRADRQP-EFTQIDIEMS 270

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE +D+L+  E +++ VF++  + + +   F R+ Y +A+ R+GTDKPDLR  + + ++
Sbjct: 271 FVEVEDVLDINERMIKHVFKKVLDVD-LDIPFRRLTYQEAMERFGTDKPDLRFGMELKDL 329

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++    SEF VF   L    G  +  I  KG     R   D + E+A++ G  GL    W
Sbjct: 330 SDILRESEFNVFKNAL--KNGGSIRGINVKGAALMTRKQLDELVEFAKNFGAKGL---LW 384

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G V    P  K L       I  RL+ + GD    +A             R  +A
Sbjct: 385 MQVLEGEVK--SPATKFLTEGELNKILERLEAEVGDLLLIVADKDEVVFDTLGHLRVEMA 442

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   +I+ + +EF W++DFP  E++EEE++    H+PFT P+     L   + L +KA  
Sbjct: 443 KRFNLIDESKYEFVWVVDFPLLEYDEEERRYVAKHHPFTSPKDEDIDLLEKEPLKVKAKL 502

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD++ NG EI  GGIR   +E+ ++ F  +G S+E     FG L  AF+ G PPHGGIA 
Sbjct: 503 YDIILNGIEIGGGGIRISDTELQMRMFKVLGFSEEEAWKEFGFLMEAFKYGAPPHGGIAY 562

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+ M++ G+  +R+V  FP +QN   L+  +PS VS +QL+EL +++
Sbjct: 563 GLDRLAMIMTGSDTIRDVIAFPKTQNAVCLMSDAPSRVSEKQLKELHIKM 612


>gi|29839845|ref|NP_828951.1| aspartyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|31340507|sp|Q46175|SYD_CHLCV RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|29834192|gb|AAP04829.1| aspartyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 584

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/595 (40%), Positives = 349/595 (58%), Gaps = 18/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
           +YRTH C +L +S+VG  VR+SGWVHR R HGG++F+D+RD +GITQ+V   D      +
Sbjct: 2   KYRTHRCNELSLSNVGERVRVSGWVHRYRNHGGVVFIDLRDRFGITQIVCREDEKPELHQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
           +  SVRSEWVL ++G V  R     NAN+ TG IE+  +K++ILS A+ LP  +  +   
Sbjct: 62  LVDSVRSEWVLSVEGTVCRRLEGMENANLATGDIEVEIEKVDILSKAKNLPFSISDDHIH 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LD+RR  +   ++ R +++ + R  M  + F E  TP+L  S+PEGARD
Sbjct: 122 VNEELRLEYRYLDMRRGQILDRLIYRHKVMLACRQYMDKQGFTEVVTPVLGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  GSFYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+D+
Sbjct: 182 YLVPSRIYPGSFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFAQIDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           EMSF   DD+   +E +   V E FS  G  +     R+ Y +A   YGTDKPDLR  + 
Sbjct: 241 EMSFATPDDLFPIIEQL---VVEMFSVQGIKIDLPLPRMTYQEAKDLYGTDKPDLRFGLQ 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +  EH     F +F   L+     + + +P  G   +R   D   E+ +  G  GL +
Sbjct: 298 LRDCREHAKQFSFSIFLDQLAQGGTIKGFCVPG-GADMSRKQLDVYTEFVKRYGAMGLVW 356

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-AR 417
           I  +  E+G  +    VAK  +    +A+      +D D    IA  P    + + D  R
Sbjct: 357 I--KKQENGLASN---VAKFASEEVFDAMFADFSAKDNDILLLIAA-PESIANQSLDHLR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             I +E  + N + + F WI DFP +   +EE KI   H+PFT P     SL   D LS+
Sbjct: 411 RLIGKERNLYNESQYNFVWITDFPLFA--KEEGKICSEHHPFTSPLDEDISLLDTDPLSV 468

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           ++  YDLV NG+EIASG  R H +++  + FS + +S E ++ +FG    A   G PPH 
Sbjct: 469 RSSSYDLVLNGYEIASGSQRIHNADLQNKIFSILELSPESIKEKFGFFIDALSFGTPPHL 528

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIA G+DRI+M+L GA+ +REV  FP +Q   DL+M +P+ +   QL+EL +++ 
Sbjct: 529 GIALGLDRIMMVLTGAEGIREVIAFPKTQKAADLMMNAPAEIMTSQLKELNIKVT 583


>gi|26987948|ref|NP_743373.1| aspartyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|148546485|ref|YP_001266587.1| aspartyl-tRNA synthetase [Pseudomonas putida F1]
 gi|37999411|sp|Q88NJ4|SYD_PSEPK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225378|sp|A5VZU3|SYD_PSEP1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|24982660|gb|AAN66837.1|AE016312_8 aspartyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|148510543|gb|ABQ77403.1| aspartate--tRNA(Asn) ligase [Pseudomonas putida F1]
 gi|313497564|gb|ADR58930.1| AspS [Pseudomonas putida BIRD-1]
          Length = 591

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/596 (41%), Positives = 354/596 (59%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRAETFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R    +NAN+ +G IE+   ++ +L+ AE  P P+    +  E 
Sbjct: 63  RVRSEYVVQITGKVRKRPEGAVNANMASGAIEILGYQLNVLNEAETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R +YRF+DLRR  +   +  R+RI +S+R R + EN F++  TPILT ++PEGARD+LV
Sbjct: 123 TRLRYRFIDLRRPEMADKLRLRSRITSSIR-RFLDENGFLDVETPILTRATPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 182 PSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++ +I+   E+++R +F+E  +       F  + +++A+RRYG+DKPDLR P+ + +V
Sbjct: 241 FLDESEIMGLTESMIRKLFKEVLDLEF--GEFPHMTFEEAMRRYGSDKPDLRIPLELVDV 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     +F+VF+   + +P   V A+   GG    R+  D   ++    G  GLAYI  
Sbjct: 299 ADQLKDVDFKVFAGPAN-DPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGAKGLAYIKV 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G      P+ K++   N   I  R+   DGD  FF A D  K  S A  A R  +
Sbjct: 358 NERAKGVEGLQSPIVKNIPEANLNNILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIRL 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +  ++ C  +   W++DFP +E N E+      H+PFT P+   E L+ N   ++ + 
Sbjct: 417 GHDFELLTCE-WAPMWVVDFPMFEEN-EDGSFTALHHPFTAPKCTPEELEANPATAL-SR 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  E+    F  +GI  E  E +FG L  A + G PPHGG+A
Sbjct: 474 AYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIEAEEQEEKFGFLLDALKFGAPPHGGLA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VML+ GA+++REV  FP +Q+   ++  +P  V  + LREL +R+ E  K
Sbjct: 534 FGLDRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGMVDAKALRELHIRLREQTK 589


>gi|290581365|ref|YP_003485757.1| aspartyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254998264|dbj|BAH88865.1| aspartyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 589

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/599 (38%), Positives = 358/599 (59%), Gaps = 23/599 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP +A   +   
Sbjct: 3   RSMYAGAVRSEHIGQELTLKGWVARRRDLGGLIFIDLRDREGIVQLVVNPKTASNTVVKS 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G+++ R  +  N N+ TG +E+   ++ IL+ ++  P  +  + E  
Sbjct: 63  AESLRSEYVIEVTGMIVER--DQANDNLPTGCVEMQVTQLTILNASQTPPFEIKDKIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + KN   R ++ + +R  +   +FI+  TP+L  S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLKNFKLRAKVTHVIRNYLDDLDFIDVETPMLAKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+++G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRMSRGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I    E ++  V +E   G  +     +I YD A+  YG+DKPD R  + + +
Sbjct: 240 SFLSEQEIQEITERLIACVMKEVK-GIELQLPLPQISYDTAMNNYGSDKPDTRFEMTLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +T+   + +F+VFS+  +V       AI AK    +  R   D++ +  +  G  GLA++
Sbjct: 299 LTDLVKNIDFKVFSQAPAVK------AIVAKNAANSYSRKAIDKLTDIVKPFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            +   + G     GP+AK L  +  E I  RL ++  D  FF+A D L+  + +  A RN
Sbjct: 353 KYNDGKIG-----GPIAKFLTTIEDELIE-RLQLEANDLVFFVADD-LEIANGSLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           H+A+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ    +    DL  ++
Sbjct: 406 HLAKELNLIDHSKFNFLWVVDWPMFEWSEEENRYTSAHHPFTLPQEDTVAELEGDLSKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E   + F  +G +KE  + +FG L  A   G PPHGG
Sbjct: 466 AVAYDIVLNGYELGGGSLRINQRETQERMFKALGFTKESAQKQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DR VMLL G +N+REV  FP +    D +  +PS VS +QL EL L++ +N  K
Sbjct: 526 LALGLDRFVMLLAGKENIREVIAFPKNNKASDPMTQAPSLVSDKQLDELYLQVNKNAVK 584


>gi|134098612|ref|YP_001104273.1| aspartyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|166225424|sp|A4FBC3|SYD_SACEN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|133911235|emb|CAM01348.1| aspartyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 606

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/593 (40%), Positives = 345/593 (58%), Gaps = 22/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +    E A  
Sbjct: 3   RTHEAGSLRAGHAGQSVTLAGWVARRRDHGGVIFIDLRDASGVAQVVFR-EGEMAERAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ L I G V+ R     N  I TG IE++A ++E+LS +  LP P+    E  E  
Sbjct: 62  LRSEFCLRITGEVVRRPEGNENPEIGTGDIEVTATELEVLSESAPLPFPLDEHLEVGEET 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR+   K +  R+ +    R  +   +F+E  TP +T S+PEGARDFL+P+
Sbjct: 122 RLRHRYLDLRRNGPAKAMRMRSEVNRIARDVLHGRDFVEVETPTMTRSTPEGARDFLIPA 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G++YALPQ+PQ +KQLLM  G +RYFQIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 182 RLQPGNWYALPQSPQLFKQLLMVGGLERYFQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E ++  ++ E + G+ +     R+ Y DA+ R+GTDKPDLR  + +  +TE
Sbjct: 241 DQDDVIELGEEIISALWRE-TAGHEIPRPIQRMTYADAMARFGTDKPDLRFGLELTEMTE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+   GG    R   D   +WA+ +G  GLAY+   +
Sbjct: 300 YFADTPFRVFRAPY-------VGAVVMPGGADQPRRQLDAWQDWAKQRGAKGLAYVL--V 350

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G ++  GPVAK+L+    + +   +    GD  FF AGD     +    AR  I + 
Sbjct: 351 GQDGTLS--GPVAKNLSDGERDGLVKAVGAAPGDCVFFAAGDRSSSRALLGAARLEIGER 408

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQGGMESLKGNDLLS 476
            G+I+ + + F W++D P +E  ++   +          H+PFT P         +D  +
Sbjct: 409 CGLIDHDAWSFVWVVDAPMFESIDDTDDVAVGSGRWTAVHHPFTSPNADWVDNFESDPAN 468

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A+ YD+VCNG EI  G IR H S+V  + F  +GIS+E  +++FG L  AF+ G PPH
Sbjct: 469 ALAWAYDIVCNGNEIGGGSIRIHRSDVQKRVFELLGISEEQAQDKFGFLLEAFKYGPPPH 528

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           GGIA G DRI MLL GA ++R+V  FP S    D L G+PS ++VEQ +E G+
Sbjct: 529 GGIAFGWDRICMLLAGADSLRDVIAFPKSGGGYDPLTGAPSPITVEQRKEAGV 581


>gi|33862244|ref|NP_893805.1| aspartyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|46577193|sp|Q7UZH8|SYD_PROMP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33634462|emb|CAE20147.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 598

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/601 (38%), Positives = 353/601 (58%), Gaps = 20/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R   C +L  SD+G  V L GWV R R HGG+IF+D+RDH G  Q+  NP+     F+ A
Sbjct: 2   RNKICEELNKSDIGKVVNLCGWVDRRRDHGGVIFIDLRDHSGFMQITINPEDGETLFKQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLP--VFGERE 119
           + +R+E V+ ++G+V  R  ++IN NI+TG++EL  + ++IL+ +   LP P  V     
Sbjct: 62  EILRNETVIMVNGIVNERPKDSINKNILTGELELKVKDLQILNQIKNNLPFPISVHDYEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLRR  L KN+  R +II ++R  +    F E  TP+LT S+PEGARD
Sbjct: 122 TKEELRLKYRYLDLRRGKLLKNLKTRHKIIKAVREYLDNSGFTEVETPLLTKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP+R++ G F+ALPQ+PQ +KQLLM  G D+Y+QIA CFRDED R+DR P EF QLD+
Sbjct: 182 FLVPARLSNGEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ +++I++  E +++ V++   N N  +  F R+ + +A+  YGTD+PD R  +++
Sbjct: 241 EMSFISEEEIISFNEKLIKNVWKNVLNIN-FNEEFPRMTWQEAMDNYGTDRPDTRYEMLL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-----DRMNEWARSQGQP 354
            N+     +  F +F+K  ++  G  + +I  K G  + +         + + A+  G  
Sbjct: 300 KNLGGILGNIGFNIFTK--AIQNGGAIKSITIKDGNTSISNVRIKPGGDIFKVAQDAGAG 357

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GLA+I  + DE   +  +G +  +LN  +   I    + +DGD     AG+         
Sbjct: 358 GLAFIRVKGDE---LETIGAIKNNLNKDHISTILKITEAKDGDLILLGAGNTQIVNQSLD 414

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLK--G 471
             R +IA++L +I  + + F W+ DFP +E NEEEK+ +  H+PF  P+   +E  K   
Sbjct: 415 RVRQYIAKDLKLIEKDKWNFLWVTDFPMFEMNEEEKRFEALHHPFCSPKNIKLEDSKELK 474

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
             + S  A  YDLV NG E+  G +R H +E+  +    VG++   +  +FG L  A + 
Sbjct: 475 EKIESSTAHAYDLVLNGLELGGGSLRIHQAEMQREVLRTVGLTDNQINEKFGFLIEALEM 534

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DRI ML+LG  ++RE   FP +Q    LL  +PS VS  QL+EL + I
Sbjct: 535 GAPPHGGIAFGVDRITMLILGEDSIRETIAFPKNQQAKCLLTNAPSNVSKSQLKELDIEI 594

Query: 592 V 592
            
Sbjct: 595 T 595


>gi|260589626|ref|ZP_05855539.1| aspartate--tRNA ligase [Blautia hansenii DSM 20583]
 gi|331083058|ref|ZP_08332175.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260539866|gb|EEX20435.1| aspartate--tRNA ligase [Blautia hansenii DSM 20583]
 gi|330405060|gb|EGG84597.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 601

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/593 (40%), Positives = 356/593 (60%), Gaps = 15/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           R+H C ++  +++GS V L GWV + R  GGI+F+D+RD  GI Q++    + D   FE 
Sbjct: 10  RSHRCTEVTKAEIGSTVTLMGWVQKSRNKGGIVFVDLRDRSGIMQIIFENGDIDEQGFEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+V+ + G V +RS   +N N+ TG+IE+ A ++ ILS AE  P P+    +  
Sbjct: 70  AGRLRSEFVIAVKGRVEARSG-AVNPNLPTGEIEVRAIELRILSEAETPPFPIEENSKTR 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  L KN++ R+++   +R  +  E F+E  TP L  S+PEGARD+L
Sbjct: 129 DEVRLKYRYLDLRRPDLQKNMMLRSQVSTLVRQFLAKEGFLEIETPTLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGSFYALPQSPQIFKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ +D+L+  E +L  +F+E   G  V     R+ + DA+ R+G+DKPDLR  + + +
Sbjct: 248 SFVDVEDVLDVNERMLAFLFKEVL-GVEVQLPIERMTWIDAMNRFGSDKPDLRFGMELTD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V+E     EF VF   L    G  V  I AKG G   R   D++ E+A+  G  GLAYI 
Sbjct: 307 VSEVVKDCEFAVFKGAL--ENGGSVRGINAKGQGAMPRKKIDKLVEFAKGYGAKGLAYI- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
             + E G V      AK +     +A+   +  ++GD    +A D  K       A R  
Sbjct: 364 -AIGEDGTVK--SSFAKFMKEEEMQALIQAMKGENGD-LLLLAADKTKLVWDVLGALRLE 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+++ +++ N + F WI +FP  EW+EE+++    H+PFTMP          +   ++A
Sbjct: 420 LAKQMDLLDKNEYRFVWITEFPLLEWSEEDERFTAMHHPFTMPMEEDLQYIDTEPGRVRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G +R    +V  + F  +G +KE  + +FG L  AF+ G+PPH G+
Sbjct: 480 KAYDIVLNGNEIGGGSVRIFQDDVQEKMFEALGFTKEEAQKQFGFLLDAFKYGVPPHAGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VML+    ++R+V  FP  ++   L+  +P  V  +QL ELG+ IV
Sbjct: 540 AYGLDRLVMLMAKVDSIRDVIAFPKVKDASCLMSEAPDIVDEKQLEELGIAIV 592


>gi|315503203|ref|YP_004082090.1| aspartyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315409822|gb|ADU07939.1| aspartyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 601

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/588 (40%), Positives = 352/588 (59%), Gaps = 17/588 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G L  +D GS V L+GWV R R HGG+IF+D+RD  G+ QVV        E A +
Sbjct: 3   RTHNAGSLRAADAGSTVTLAGWVARRRDHGGVIFVDLRDASGVVQVVFRE-----EDAHA 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N ++ TG++E++A ++E+LS A  LPLPV  + E  + I
Sbjct: 58  LRNEFCVKVTGEVTRRPEGNENPDLPTGEVEVTASELEVLSEAAPLPLPVDDQIEAGDDI 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR    K +  R+R     R  +   +F+E  TP LT S+PEGARDFLVP 
Sbjct: 118 RLKYRYLDLRRGGPAKAMRLRSRANQIARGVLHERDFLEIETPTLTRSTPEGARDFLVPV 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 178 RLQPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +DD+++  E ++  ++++ + G  ++    RI + DA+ RYG+DKPDLR  + +  +T+
Sbjct: 237 TEDDVIDLGEAIVSALWKDLA-GYEIARPIPRITWHDAMSRYGSDKPDLRYGVELTELTD 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   +EFRVF+   +++ G  V A+   GG    R   D   +WA+++G  GLAY+   L
Sbjct: 296 YLRGTEFRVFAG--AIDAGGYVGAVVMPGGASQTRKELDGWQDWAKARGARGLAYVV--L 351

Query: 364 D-ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS-FAADARNHIA 421
           D E+G     GPVAK+L+  +   +   +  + GD+ FF A    +        AR  IA
Sbjct: 352 DAETGEA--RGPVAKNLSEAHLSGLADAVGAKPGDAVFFAASTNTREAQELLGAARIEIA 409

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   +I+ + + FCW++D P +E   +E      H+PFT P                A+ 
Sbjct: 410 KRANLIDESAWAFCWVVDAPMFE-RTDEGGWTAVHHPFTSPNAEWVDRFEEAPDRALAYA 468

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+VCNG EI  G IR H  +V  + F  +GI+ +  +++FG L  AF+ G PPHGGIA 
Sbjct: 469 YDIVCNGNEIGGGSIRIHRGDVQQRVFDLLGITADEAQDKFGFLLEAFKYGAPPHGGIAF 528

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           G DR+ MLL GA ++REV  FP ++   D L G+P+ ++ +Q  E G+
Sbjct: 529 GWDRVCMLLAGADSIREVIAFPKTRGGFDPLTGAPTPITGQQRAEAGI 576


>gi|291009610|ref|ZP_06567583.1| aspartyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 605

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/593 (40%), Positives = 345/593 (58%), Gaps = 22/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +    E A  
Sbjct: 2   RTHEAGSLRAGHAGQSVTLAGWVARRRDHGGVIFIDLRDASGVAQVVFR-EGEMAERAHR 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ L I G V+ R     N  I TG IE++A ++E+LS +  LP P+    E  E  
Sbjct: 61  LRSEFCLRITGEVVRRPEGNENPEIGTGDIEVTATELEVLSESAPLPFPLDEHLEVGEET 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR+   K +  R+ +    R  +   +F+E  TP +T S+PEGARDFL+P+
Sbjct: 121 RLRHRYLDLRRNGPAKAMRMRSEVNRIARDVLHGRDFVEVETPTMTRSTPEGARDFLIPA 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G++YALPQ+PQ +KQLLM  G +RYFQIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 181 RLQPGNWYALPQSPQLFKQLLMVGGLERYFQIARCYRDEDFRADRQP-EFTQLDIEMSFV 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E ++  ++ E + G+ +     R+ Y DA+ R+GTDKPDLR  + +  +TE
Sbjct: 240 DQDDVIELGEEIISALWRE-TAGHEIPRPIQRMTYADAMARFGTDKPDLRFGLELTEMTE 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+   GG    R   D   +WA+ +G  GLAY+   +
Sbjct: 299 YFADTPFRVFRAPY-------VGAVVMPGGADQPRRQLDAWQDWAKQRGAKGLAYVL--V 349

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G ++  GPVAK+L+    + +   +    GD  FF AGD     +    AR  I + 
Sbjct: 350 GQDGTLS--GPVAKNLSDGERDGLVKAVGAAPGDCVFFAAGDRSSSRALLGAARLEIGER 407

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQGGMESLKGNDLLS 476
            G+I+ + + F W++D P +E  ++   +          H+PFT P         +D  +
Sbjct: 408 CGLIDHDAWSFVWVVDAPMFESIDDTDDVAVGSGRWTAVHHPFTSPNADWVDNFESDPAN 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A+ YD+VCNG EI  G IR H S+V  + F  +GIS+E  +++FG L  AF+ G PPH
Sbjct: 468 ALAWAYDIVCNGNEIGGGSIRIHRSDVQKRVFELLGISEEQAQDKFGFLLEAFKYGPPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           GGIA G DRI MLL GA ++R+V  FP S    D L G+PS ++VEQ +E G+
Sbjct: 528 GGIAFGWDRICMLLAGADSLRDVIAFPKSGGGYDPLTGAPSPITVEQRKEAGV 580


>gi|302866788|ref|YP_003835425.1| aspartyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302569647|gb|ADL45849.1| aspartyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 601

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/588 (40%), Positives = 352/588 (59%), Gaps = 17/588 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G L  +D GS V L+GWV R R HGG+IF+D+RD  G+ QVV        E A +
Sbjct: 3   RTHNAGSLRAADAGSTVTLAGWVARRRDHGGVIFVDLRDASGVVQVVFRE-----EDAHA 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N ++ TG++E++A ++E+LS A  LPLPV  + E  + I
Sbjct: 58  LRNEFCVKVTGEVTRRPEGNENPDLPTGEVEVTASELEVLSEAAPLPLPVDDQIEAGDDI 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR    K +  R+R     R  +   +F+E  TP LT S+PEGARDFLVP 
Sbjct: 118 RLKYRYLDLRRGGPAKAMRLRSRANQIARGVLHERDFLEIETPTLTRSTPEGARDFLVPV 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 178 RLQPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +DD+++  E ++  ++++ + G  ++    RI + DA+ RYG+DKPDLR  + +  +T+
Sbjct: 237 TEDDVIDLGEAIVSALWKDLA-GYEIARPIPRITWHDAMSRYGSDKPDLRYGVELTELTD 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   +EFRVF+   +++ G  V A+   GG    R   D   +WA+++G  GLAY+   L
Sbjct: 296 YLRGTEFRVFAG--AIDAGGYVGAVVMPGGASQTRKELDGWQDWAKARGARGLAYVV--L 351

Query: 364 D-ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS-FAADARNHIA 421
           D E+G     GPVAK+L+  +   +   +  + GD+ FF A    +        AR  IA
Sbjct: 352 DAETGEA--RGPVAKNLSEAHLSGLADAVGAKPGDAVFFAASTNTREAQELLGAARIEIA 409

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   +I+ + + FCW++D P +E   +E      H+PFT P                A+ 
Sbjct: 410 KRANLIDESAWAFCWVVDAPMFE-RTDEGGWTAVHHPFTSPNAEWVDRFEEAPDRALAYA 468

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+VCNG EI  G IR H  +V  + F  +GI+ +  +++FG L  AF+ G PPHGGIA 
Sbjct: 469 YDIVCNGNEIGGGSIRIHRGDVQQRVFDLLGITADEAQDKFGFLLEAFKYGAPPHGGIAF 528

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           G DR+ MLL GA ++REV  FP ++   D L G+P+ ++ +Q  E G+
Sbjct: 529 GWDRVCMLLAGADSIREVIAFPKTRGGFDPLTGAPTPITGQQRAEAGI 576


>gi|72162485|ref|YP_290142.1| aspartyl-tRNA synthetase [Thermobifida fusca YX]
 gi|97196980|sp|Q47N50|SYD_THEFY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71916217|gb|AAZ56119.1| aspartyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 579

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/589 (40%), Positives = 336/589 (57%), Gaps = 19/589 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L        V L+GWV R R HGG++FLD+RD  GI QVV   D    E+A  
Sbjct: 3   RTHEAGTLRADHAEQNVVLAGWVARRRDHGGVVFLDLRDASGIVQVVVRED----ELAHD 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + + G V  R     N +I TG+IE+ A  IE+LS +  LP P+ G +E  E  
Sbjct: 59  LRSEYCIKVTGTVRIRPEGNENPDIATGEIEVVASHIEVLSESAPLPFPLDGNQEISEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LD+RR    + +  R+R        M    F+   TP LT S+PEGARDFLVP 
Sbjct: 119 RLRYRYLDMRRPETAEALRVRSRATYIAHEVMNDNGFVYVETPYLTRSTPEGARDFLVPV 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM  G +RY+Q+  CFRDED R+DR P EF Q+D+EMSFV
Sbjct: 179 RLQPGHWYALPQSPQLFKQLLMVGGMERYYQLTRCFRDEDFRADRQP-EFTQIDIEMSFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D+ +  E +   +  E   G  +   F R+ + +A+ R+GTDKPDLR    +  +T+
Sbjct: 238 DEEDLFDIGEKLFTRLLREV-RGVELPRPFRRMKFAEAMDRFGTDKPDLRFGQELVELTD 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363
            F ++ FRVF           V A+   GG    R   D   EWARS+G  GLAY+   +
Sbjct: 297 FFANTPFRVFQAPY-------VGAVVMPGGASQTRRELDAWQEWARSRGAKGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPVAK+L+      +  R+  + GD+ FF AG+          AR  I + 
Sbjct: 348 HEDGTLG--GPVAKNLSEEERAGLAERVGAKPGDAIFFSAGERTASQELLGAARLEIGKR 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G+I+ + +E  WI D P +E  ++E      H+PFT P   +     ND  S  A  +D
Sbjct: 406 CGLIDESAWEVLWITDMPMFE-KDDEGGWTSVHHPFTAPAQEVADTFHNDPGSATARAFD 464

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG+E+ASG IR H +E+  + F  +G+SK+  E +FG L  AFQ G PPHGG+A G 
Sbjct: 465 LVMNGYELASGSIRIHRAEMQQRVFDTIGLSKDEAETKFGFLLEAFQFGPPPHGGLAVGW 524

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           DR+VMLL G   +R+V  FP + +  D L G+P+ ++ EQ RE G+  V
Sbjct: 525 DRLVMLLAGQSTIRDVIAFPKTASGADPLTGAPTPITAEQRREAGVDAV 573


>gi|291557677|emb|CBL34794.1| aspartyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 588

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/592 (39%), Positives = 352/592 (59%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62
           RTH CG+  V  +GS V ++G+V RVR  G ++F+D+RD  GI Q+V +   + A FE A
Sbjct: 6   RTHYCGE--VEGIGSTVTVAGFVQRVRDKGSLMFVDLRDRTGIVQLVFDDTTEPAVFEKA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K ++SE+VL   GL+  R  E+ N +I TG +E+    + ILS+A+  P  +  + +  E
Sbjct: 64  KQIKSEYVLMAQGLL--RERESKNNDIKTGNVEILVTDLRILSMAQTTPFEIVNDTKTNE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  L  N++ R RI  + R       F+E  TP++  S+PEGARD+LV
Sbjct: 122 ELRLKYRYLDLRRKKLQDNLIMRHRIAKTAREYFYDNGFLEIETPMMMKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQ+PQ YKQLLM SGFDRY Q+A CFRDED R+DR P EF Q+D+EMS
Sbjct: 182 PSRVHEGKFYALPQSPQIYKQLLMISGFDRYIQLARCFRDEDLRADRQP-EFTQIDLEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++ D+IL   E  ++ + ++  + + ++    R+ Y+DA+ RYG+DKPD R  + + ++
Sbjct: 241 FMDVDEILELTEGFIKKLMKDVLDVD-ITTPLPRLTYNDAMSRYGSDKPDTRFGMEIQDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++    +EF VFS   ++  G  V AI AK   G   R   D++ E+++  G  GLAYI 
Sbjct: 300 SDIVKDTEFSVFSS--AIAAGGSVRAIVAKNAAGVLTRKEIDKLTEFSKGIGAKGLAYIR 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W  D++ N +     AK L     +AI   L  + GD    +A             R  +
Sbjct: 358 WH-DDAPNCS----FAKFLKEGELDAILSHLGCEKGDVVLIVADKNKVTLPVLGALRLKV 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +++GI+  + + F WI +FPF+EW++E +     H+PFTMP          D   ++A 
Sbjct: 413 GKQIGIVPDSGYNFLWITEFPFFEWDDESESWLAMHHPFTMPMEECLEYLDTDKGKVRAK 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+ SG IR    E+  + F  +G++ + +E +FG L  A++   PPHGG+ 
Sbjct: 473 AYDLVLNGIELCSGSIRITDPELQERMFRLLGLTDKEIEEKFGFLVDAYKYAAPPHGGLG 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+ MLL GA ++R+V  FP  ++  +L+   PS V  +QL EL ++ +
Sbjct: 533 IGLDRLSMLLCGADSLRDVVAFPKVKDASELMSQCPSVVDDKQLEELHIKTM 584


>gi|291530817|emb|CBK96402.1| aspartyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 588

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/592 (39%), Positives = 352/592 (59%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62
           RTH CG+  V  +GS V ++G+V RVR  G ++F+D+RD  GI Q+V +   + A FE A
Sbjct: 6   RTHYCGE--VEGIGSTVTVAGFVQRVRDKGSLMFVDLRDRTGIVQLVFDDTTEPAVFEKA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K ++SE+VL   GL+  R  E+ N +I TG +E+    + ILS+A+  P  +  + +  E
Sbjct: 64  KQIKSEYVLMAQGLL--RERESKNNDIKTGNVEILVTDLRILSMAQTTPFEIVNDTKTNE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  L  N++ R RI  + R       F+E  TP++  S+PEGARD+LV
Sbjct: 122 ELRLKYRYLDLRRKKLQDNLIMRHRIAKTAREYFYDNGFLEIETPMMMKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQ+PQ YKQLLM SGFDRY Q+A CFRDED R+DR P EF Q+D+EMS
Sbjct: 182 PSRVHEGKFYALPQSPQIYKQLLMISGFDRYIQLARCFRDEDLRADRQP-EFTQIDLEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++ D+IL   E  ++ + ++  + + ++    R+ Y+DA+ RYG+DKPD R  + + ++
Sbjct: 241 FMDVDEILELTEGFIKKLMKDVLDVD-ITIPLPRLTYNDAMSRYGSDKPDTRFGMEIQDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++    +EF VFS   ++  G  V AI AK   G   R   D++ E+++  G  GLAYI 
Sbjct: 300 SDIVKDTEFSVFSS--AIAAGGSVRAIVAKNAAGVLTRKEIDKLTEFSKGIGAKGLAYIR 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W  D++ N +     AK L     +AI   L  + GD    +A             R  +
Sbjct: 358 WH-DDAPNCS----FAKFLKEGELDAILSELGCEKGDVVLIVADKNKVTLPVLGALRLKV 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +++GI+  + + F WI +FPF+EW++E +     H+PFTMP          D   ++A 
Sbjct: 413 GKQIGIVPDSGYNFLWITEFPFFEWDDESESWLAMHHPFTMPMEECLEYLDTDKGKVRAK 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+ SG IR    E+  + F  +G++ + +E +FG L  A++   PPHGG+ 
Sbjct: 473 AYDLVLNGIELCSGSIRITDPELQERMFRLLGLTDKEIEEKFGFLVDAYKYAAPPHGGLG 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+ MLL GA ++R+V  FP  ++  +L+   PS V  +QL EL ++ V
Sbjct: 533 IGLDRLSMLLCGADSLRDVVAFPKVKDASELMSQCPSVVDDKQLEELHIKTV 584


>gi|170077050|ref|YP_001733688.1| aspartyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|238692810|sp|B1XNY9|SYD_SYNP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169884719|gb|ACA98432.1| aspartyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 596

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/598 (40%), Positives = 352/598 (58%), Gaps = 28/598 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CGDL    +   V L GWV R R HGG+IF+D+RD  GI Q+V++P      +  A
Sbjct: 2   RTHYCGDLRSEHIDQTVTLYGWVDRRRDHGGVIFIDLRDRTGIVQIVSDPQRTPDSYNDA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGER--- 118
            + RSE+V+ I G V +R     N  + TG++E+ A  IEIL+ V ++LP+ V       
Sbjct: 62  DASRSEYVVKIVGKVSARQEGAKNPKLPTGEVEIYADTIEILNGVHKQLPILVSSSADGD 121

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA--ENFIECSTPILTASSPEG 176
           +  E +R KYR+LDLRR+T+ KN+  R  ++ SMR R +   ENF+E  TPILT S+PEG
Sbjct: 122 QVKEDLRLKYRYLDLRRETMAKNLQLRHTVVKSMR-RFLEDDENFMEVETPILTRSTPEG 180

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSRVN G +YALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF Q
Sbjct: 181 ARDYLVPSRVNPGDWYALPQSPQLFKQLLMVAGCDRYYQIARCFRDEDLRADRQP-EFTQ 239

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEMSF+  D+I++  E ++  +F++ + G  +   F RI Y +++ +YG D+PD R  
Sbjct: 240 LDMEMSFMSFDEIIDLNERLICRIFQD-AQGIELERPFPRITYAESMEKYGCDRPDTRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWAR 349
           + + NV++      F+VFS  +      +V  IP     GN A  +        +   A 
Sbjct: 299 LELVNVSDIVADMGFKVFSGAVKSGGQVKVLPIP----NGNDAISNVRIKPGGDLFNAAV 354

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
             G  GLA+I  R+ E G +  +G +  +L+    + +  R   + G    F AG     
Sbjct: 355 EMGAKGLAFI--RVREDGAIDTIGAIKDNLSDAQKQELLSRTGAEAGTLLLFGAGATDIV 412

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
                  R  +  E+G+IN N   F W+ DFP +E+N +EK+++  H+PFT P    E L
Sbjct: 413 NKSLDRVRQLVGAEMGLINENQLNFVWVTDFPMFEYNSDEKRLEALHHPFTAPNP--EDL 470

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
           +  DL + +A  YD+V NG EI  G +R +  EV  + F  +G+S+   + +FG L  AF
Sbjct: 471 E--DLATARALAYDIVLNGIEIGGGSLRIYQREVQEKVFQTIGLSETEAQEKFGFLLEAF 528

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           + G PPHGGIA G+DR+VML+    ++R+V  FP +Q    LL  +P+ V  +QL+EL
Sbjct: 529 EYGTPPHGGIAYGLDRLVMLMAQEDSIRDVIAFPKTQQASCLLTDAPAGVDQKQLKEL 586


>gi|225429171|ref|XP_002271358.1| PREDICTED: similar to tRNA synthetase class II (D, K and N) family
           protein [Vitis vinifera]
 gi|297736395|emb|CBI25118.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 236/594 (39%), Positives = 344/594 (57%), Gaps = 18/594 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG+L V DVG  VR+ GWV   R HGG+ FL++RDH GI QV   PD         
Sbjct: 68  RTGFCGELSVDDVGKRVRICGWVALHRVHGGLTFLNLRDHTGIVQVTTLPDEFPKAHSTV 127

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF----GE 117
             +R E+V+ ++G+V SR +E+IN  + TG IE++ + +++L +V  +LP  V      +
Sbjct: 128 NELRLEYVIAVEGIVRSRPSESINKKMRTGLIEVAVEHVQVLNAVTSKLPFLVTTADDAK 187

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPE 175
               E IR +YR LDLRR  ++ NI+ R R++  +R R + +   F+E  TPIL+ S+PE
Sbjct: 188 DTVKEEIRLRYRCLDLRRQQMNSNIMLRHRVVKLIR-RYLEDIHGFVEIETPILSRSTPE 246

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARD+LVPSRV  G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF 
Sbjct: 247 GARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFT 305

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           QLDME++F   +D+L   E+++R VF E   G  + N F R+ Y +A+ RYG+D+PDLR 
Sbjct: 306 QLDMELAFTPLEDMLRLNEDLIRQVFLEI-KGIQLPNPFPRLTYAEAMSRYGSDRPDLRF 364

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
            + +  V++ F  + F+VF+  L+     +V  +P+     +     + + ++ +     
Sbjct: 365 DLELREVSDVFSETTFKVFADTLASGGIIKVLCVPSGAKHYSNTALKKGDIYSEAIKSGA 424

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
               F ++ + G V G+  +   L+  N + +  +     GD   F  GD          
Sbjct: 425 KGLPFLKVLDDGEVEGIPALVSSLDPTNKKRLLKQCSAGSGDLILFAVGDHASVNKTLDR 484

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDL 474
            R  IA ELG+++ +     W+ DFP +EWN  E++++  H+PFT P    ME     DL
Sbjct: 485 LRVFIAHELGLVDHSRHSILWVTDFPMFEWNSAEQRLEALHHPFTAPNPEDME-----DL 539

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S +A  YD+V NG EI  G +R    EV  +    VGIS E  E +FG L  A   G P
Sbjct: 540 SSARALAYDMVYNGVEIGGGSLRIFKREVQEKVLEIVGISPEQAEAKFGYLLEALDMGAP 599

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           PHGGIA G+DR+VMLL GA ++R+V  FP +      L  +PS V  +QL++L 
Sbjct: 600 PHGGIAYGLDRLVMLLAGANSIRDVIAFPKTTTAQCALTRTPSEVDPQQLKDLS 653


>gi|157165623|ref|YP_001467181.1| aspartyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|166225332|sp|A7ZEH3|SYD_CAMC1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|112801414|gb|EAT98758.1| aspartyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 585

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 242/597 (40%), Positives = 347/597 (58%), Gaps = 18/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H C DL  +D+G  V L GW +  R HGG++F+D+RD  G+ Q+V +P  +    ++A
Sbjct: 2   RSHYCTDLSKADIGKEVILCGWANTYRDHGGVVFIDLRDVSGLIQLVCDPADSKEAHDVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL   G V +R     N  + TG+IE+   ++ I + +E LP  + G+    E
Sbjct: 62  AKVRDEYVLKAKGKVRARGEGLTNPKLKTGEIEVIVSELIIENPSEPLPF-MIGDESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLDLR + L      R+R   + R  +    FIE  TP+LT ++PEGARD+LV
Sbjct: 121 DIRLKYRFLDLRSERLQNIFKMRSRAAIAARNSLDKMGFIEFETPVLTRATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVYPGQFYALPQSPQLFKQLLMCSGFDKYFQIAKCFRDEDLRADRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQ+DI+N  E +L+ +F+  + G+ +   F R+ Y +A   YG+DKPDLR  + M +V
Sbjct: 240 FVEQEDIINMAETMLKDIFK--ACGHDIKTPFRRMSYKEATETYGSDKPDLRYDLKMIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +FS I        + A+    G    ++   +R  E+ R  G  GL Y  
Sbjct: 298 IDIFERSSNEIFSSIAKDKKKNRIKALKVPNGDNIFSKREMNRFEEFVRKFGAQGLGY-- 355

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +++ E G     GP+ K     + + I  R +++ GD  FF AG       +    R  +
Sbjct: 356 FQMKEDGL---KGPLCKFFEQSDLDEIVSRCELKVGDVVFFGAGKKKIVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++GII+ +  EF W++DFP +E N ++      H+PFTMP+    ++   DL  I + 
Sbjct: 413 AEQMGIIDQDRLEFLWVLDFPMFEQN-DDGSYSAMHHPFTMPK----NIDEPDLEDILSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +D+V NGFE+  G IR H +++  + F  +GI +     +FG L  A   G PPHGGIA
Sbjct: 468 AHDVVLNGFELGGGSIRIHKNDIQQKVFKLLGIDEAEQREKFGFLLDALTFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G DR+ ML+  A ++R+V  FP +Q     L  +PS  S EQLRELGLRI E  +K
Sbjct: 528 IGFDRLNMLVNKASSIRDVIAFPKTQRAQCPLTKAPSYASNEQLRELGLRIREKEQK 584


>gi|328957465|ref|YP_004374851.1| aspartate--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673789|gb|AEB29835.1| aspartate--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 589

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/593 (39%), Positives = 348/593 (58%), Gaps = 14/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +    +G  + L GWV + R  G +IF+D+RD  GI Q+V NP        IA
Sbjct: 4   RTEYCGKVSRDLLGQEIILKGWVQKRRDLGDLIFIDLRDREGIVQIVFNPTFSKEALAIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VRSE+VL + G V+ R    +N NI TG++E+    +++L+ ++  P  +       +
Sbjct: 64  EDVRSEYVLEVKGKVVERKEAVVNKNISTGELEVEVYDVKVLNASKTTPFYIEDGVAVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R +YR+LDLRR  + +N++ R ++  S+R  +   NFI+  TP LT S+PEGARD+LV
Sbjct: 124 DKRMQYRYLDLRRPEMTQNMILRHQMTKSIRHYLDDRNFIDTETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVHPGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+E ++I +  E +L  V ++ +    ++  F R+ YD+AI RYG+DKPD+R  + + +V
Sbjct: 243 FLEPEEIQSFTEELLAKVLKD-TKDVELTLPFPRMGYDEAISRYGSDKPDVRFGLELVDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           ++    S F+VFS   ++  G  V AI AKG   N  R   D + E+    G  GLA++ 
Sbjct: 302 SDLVKDSSFKVFSG--AIENGGAVKAINAKGAASNYSRKDIDALGEFVSVYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++++ G     GP+AK     + EA+  +++ + GD   F+A             R+ +
Sbjct: 359 -KVEDDGL---KGPIAKFFK-EDAEALIEKMEAETGDLLLFVADKKSVVHDSLGALRSKL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + + F WI+D+P  E++EE  +   AH+PFTMP+     L   D   + A 
Sbjct: 414 GKELELIDESVYAFMWIVDWPLLEYDEEAGRYSAAHHPFTMPKESDIDLLETDPGKVYAQ 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  ++  + F+ +G SKE  E +FG L  A   G PPHGGIA
Sbjct: 474 AYDIVLNGYELGGGSIRIHTRDLQEKMFTALGFSKEEAEEQFGFLLEALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR  MLL G +N+REV  FP +    D L  +PS VS  QL EL +   +
Sbjct: 534 LGLDRFAMLLAGKENIREVIAFPKNGKATDPLTSAPSLVSEAQLDELSIHTTK 586


>gi|90417107|ref|ZP_01225035.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331123|gb|EAS46379.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 591

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/591 (40%), Positives = 352/591 (59%), Gaps = 11/591 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIA 62
           YR++ CG      +   V L GWV R R HGG+IF+D+RD  GI QVV +PD+   FE A
Sbjct: 2   YRSNYCGLFTSEHIDQEVTLCGWVDRRRDHGGVIFVDLRDREGIVQVVFDPDAGEFFEQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVRSE+VL + G+V +RSA T+N N+ TG+IE+    +EIL+ A   P  +       E
Sbjct: 62  DSVRSEYVLKVTGVVRARSAATVNPNMATGEIEVYGTALEILNSAVTPPFQLDDYVTVGE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR++DLRR  +  ++  R++I +S+R  ++ + F++  TPI+T ++PEGARD+L+
Sbjct: 122 DVRLKYRYMDLRRKEMQNSLRFRSKISSSIRNYLVDDGFLDIETPIMTRATPEGARDYLI 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + G F+A+PQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 182 PSRTHPGQFFAMPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIEAS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++DI++T E ++RGVF E    +     F R+ Y DA+ +YG+DKPDLR P+ +  V
Sbjct: 241 FVDEEDIMSTTETMIRGVFSEHMGVDF--ETFPRMTYADAMHKYGSDKPDLRIPLELVEV 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   V A+   GG   +R   D   ++    G  GLA+I  
Sbjct: 299 KDLLKDIEFKVFAGPAN-DPACRVTALKVPGGADISRKKIDEYTKFVSIYGAKGLAWIKV 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              E+G      P+ K L    T  I  RLD ++GD  FF   D  +  S A  A R  +
Sbjct: 358 NAIETGIEGLQSPIIKFLGDEVTMNIMQRLDAKNGDIVFF-GADKSQVVSEALGALRCKV 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +L +  C  +   W++DFP +E   +   +   H+PFT P    E LK N   ++ + 
Sbjct: 417 GADLDLYTC-VWAPMWVIDFPMFE-TTDSGALTPLHHPFTAPSCSEEELKANPGAAL-SR 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H   +    F  +GI+ E    +FG L  A + G PPHGG+A
Sbjct: 474 AYDMVLNGCELGGGSIRIHDQNMQQTVFEVLGINAEEQREKFGFLLDALKHGAPPHGGLA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR++ML+ GA ++R+V  FP +Q+   LL  +P  V   QLR+L +++
Sbjct: 534 FGLDRLIMLMTGADSIRDVIAFPKTQSAACLLTDAPGVVDNSQLRDLSIKL 584


>gi|319442141|ref|ZP_07991297.1| aspartyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 600

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/598 (41%), Positives = 341/598 (57%), Gaps = 28/598 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH CGDL   D G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +    E A  
Sbjct: 3   RTHLCGDLRSDDTGKEVTLTGWVARRRDHGGVIFIDLRDRSGLAQVVFRENEVA-ERAHD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYPE 122
           +RSE+ L + G+V +R   + N N+ +G IE++   +EIL+ +  LP  +      E  E
Sbjct: 62  LRSEYCLKVTGIVEARPEGSENPNLASGAIEVNVSDLEILNESTALPFQIEDTTGGEVGE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR+     +  R+++  + R  +  E+F E  TP LT S+PEGARDFLV
Sbjct: 122 ETRLKYRYLDLRRERQAHALRLRSKVSQAARGVLSGEDFTEIETPTLTRSTPEGARDFLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R+  GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMS
Sbjct: 182 PARLRPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+QDD++   EN+L  V++E   G  +     R+ Y +A+ +YG+DKPDLR  I +   
Sbjct: 241 FVDQDDVIALAENILTAVWKEI--GYDIQTPIPRMTYAEAMEKYGSDKPDLRFDIQITEC 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFW 361
           TE F  + FRVF           V A+  +GG    R   D   EWA+ +G  GLAYI  
Sbjct: 299 TEFFKDTSFRVFKAPY-------VGAVVMEGGASQPRRTLDAWQEWAKQRGAKGLAYIL- 350

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G +   GPVAK++     E I   +  + GD  FF AG+     +    AR  IA
Sbjct: 351 -VGEDGTL--TGPVAKNITDAEREGIAAHVGAKPGDCIFFGAGEVKPSRALLGAARGEIA 407

Query: 422 QELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLKG 471
           + LG+I    + F W++D P +E   +     D A         H+ FT P+        
Sbjct: 408 ERLGLIKEGDWAFTWVVDAPLFEPAADATASGDVALGHSTWTAVHHAFTSPKPEWIDSFD 467

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            +     A+ YD+VCNG EI  G IR H  +V  + F+ +GIS+E    +FG L  AF  
Sbjct: 468 ENPGEATAYAYDIVCNGNEIGGGSIRIHQRDVQERVFAVMGISEEEAREKFGFLLDAFAF 527

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           G PPHGGIA G DRIV LL G +++R+V  FP S    D L  +P+ ++ +Q +E G+
Sbjct: 528 GAPPHGGIAFGWDRIVSLLGGYESIRDVIAFPKSGGGVDPLTEAPAPITAQQRKEAGI 585


>gi|111115273|ref|YP_709891.1| aspartyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123145714|sp|Q0SN63|SYD_BORAP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110890547|gb|ABH01715.1| aspartyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 586

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 229/591 (38%), Positives = 350/591 (59%), Gaps = 12/591 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++   C +L    +   V ++ WV ++R HG   FLDIRD Y   QV+   +    +I +
Sbjct: 2   FKVIKCNELNEKLINKKVEINAWVKKIRHHGKFTFLDIRDRYEKAQVLIT-EEHLLKIVE 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + I GL++ R +  INAN+ TG  E+ A+ IEI+S   ELP  +  +    E+
Sbjct: 61  KIKLEYCIKIQGLLIKRPSNMINANMTTGYFEILAKNIEIISKCNELPFMIEDDNNASEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + KYR+LDLRRD+L   I+ R +  + +R  ++   F+E  TP    S+PEGARDF++P
Sbjct: 121 SKLKYRYLDLRRDSLKNKIILRCQATHLIRNFLVKRKFLELETPTFVKSTPEGARDFVIP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++++I   +EN+L  +F+   N   +S  F +I Y  A+ +YG+DKPD R  + + +++
Sbjct: 240 VKKENIFKLIENMLFSIFKNCLNI-KLSKKFKKITYKTAMNKYGSDKPDTRFELTLQDIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
            +  +SEF VF  IL+     +   +  K    +RA  + + E A+     GL   F ++
Sbjct: 299 RNLKNSEFNVFKDILNNKGSIKTLIVKDKADTFSRAKINNLEEIAKLYKTQGLY--FTKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422
           +   N    G +AK L     + I+    +++ D  FFIA +  +  C      R  IA 
Sbjct: 357 E---NNKFSGGIAKFLKTEEQQLIKA-YSLENNDIIFFIANNKWEIACKAMGQIRIKIAN 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481
           +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+   + +L+ N   +I    
Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYIPAHHMFSIPKKRYISNLEKNPNKAIGEI- 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ I 
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIA 582


>gi|289423169|ref|ZP_06424984.1| aspartate--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156500|gb|EFD05150.1| aspartate--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 593

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/594 (39%), Positives = 352/594 (59%), Gaps = 18/594 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61
           +RT   G+L + +VG  V L GWV + R  GG++F+D+RD  GI Q+V   + D   FE 
Sbjct: 8   HRTCYAGELRIENVGQQVTLMGWVQKKRNLGGLVFVDLRDRGGIAQLVFDIDVDKEAFEK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            + + SE+V+ + G V  R ++  N N+ TG +E+  +++ +L+ ++  P+ V  + +  
Sbjct: 68  GEKLASEYVIAVRGKVCERQSK--NPNMATGDVEVFVEELRVLNESQTPPIYVKDDDDVA 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLR+  + KN++ R R+ N  R  +   NF E  TP L   +PEGARD+L
Sbjct: 126 EALRLKYRYLDLRKPKMQKNLMLRHRVTNIARNYLSDNNFCEIETPFLVKPTPEGARDYL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ YKQLLM SG DRYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 186 VPSRVNEGRFYALPQSPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDLEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE++D++  ME  L+ +F+E   G  +     R+ Y +A+ R+G+DKPD R  +   N
Sbjct: 245 SFVEENDVMTMMEGFLQKLFKEIK-GIDIDLPLPRLTYKEAMDRFGSDKPDTRYGLEFVN 303

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +++      F+VF+   S   G  V  I  KGG     R     + + A+     GLA++
Sbjct: 304 ISDVVADCGFKVFAD--STKDGKSVRGINVKGGAEEFTRKAISHLEDHAKLYKAKGLAWM 361

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E+G  +   P+AK  +    E+I+ ++  + GD   F+A             R  
Sbjct: 362 --KITEAGVTS---PIAKFFSEEELESIKTKMGAELGDLLLFVADKDSVVYDALGQVRIA 416

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
           +A +LG+ + N F   W+ +FP +E +EE  +    H+PFT P    ++ L+  D L ++
Sbjct: 417 VADKLGLADPNKFNLLWVTEFPIFEEDEENGRFAAKHHPFTSPMDEDLDHLEDEDKLKLR 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G IR   S+V  + F  +G + E   N+FG L  AF+ G PPHGG
Sbjct: 477 AKAYDIVLNGYEIGGGSIRISDSQVQKRMFKALGFTDEEAYNKFGFLIDAFKFGTPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR+VMLL GA N+REV  FP +QN  C + M +PS    +QL+EL +++
Sbjct: 537 MAFGLDRLVMLLAGADNIREVIAFPKNQNAVCPMTM-APSIAEDDQLKELSIKV 589


>gi|160947632|ref|ZP_02094799.1| hypothetical protein PEPMIC_01567 [Parvimonas micra ATCC 33270]
 gi|158446766|gb|EDP23761.1| hypothetical protein PEPMIC_01567 [Parvimonas micra ATCC 33270]
          Length = 600

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/589 (39%), Positives = 341/589 (57%), Gaps = 11/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L   D+G  V L GWV + R  G +IF+D+RD  GI+Q+V         F  A
Sbjct: 19  RTHMCGNLRKEDIGKEVILMGWVAKERNLGSLIFMDLRDTTGISQIVVRDTLGETIFNCA 78

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +RSE+VL + G+V  R  E+ N  I TG IE+   ++ IL  A+  P+ +  +    E
Sbjct: 79  KEIRSEFVLAVKGIVSER--ESKNPKIPTGDIEVEVSELVILDTAQTPPIYIKDDDNVSE 136

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYRFLDLR+++L  N+  R ++   +R      NF+E  TP L   +PEGARD+LV
Sbjct: 137 SLRLKYRFLDLRKESLQNNLKLRAKVCKVIRDFYTENNFVEIETPYLNKPTPEGARDYLV 196

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G+FYALPQ+PQ  KQLLM SG DRYFQI  CFRDED R++R P EF Q+D+EMS
Sbjct: 197 PSRVNPGNFYALPQSPQIMKQLLMISGMDRYFQIVKCFRDEDLRANRQP-EFTQVDLEMS 255

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +D+++  E +L+ +F+E   G  +     R+ YDDA+ +YG+DKPDLR    + N+
Sbjct: 256 FVDVEDVIDVNERMLKKLFKEIK-GIDIELPIKRMKYDDAMEKYGSDKPDLRFGFEIRNI 314

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+     EF +F   ++        +I        R   D++ +  R  G   L   FW 
Sbjct: 315 TDCVKEVEFDLFKNAIASGGSVRAISIGKYSKEYTRKKIDKLIDSIRDYGAKNL---FWI 371

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G V     ++K LN      I+ +++ +D D    +A       +     R  IA+
Sbjct: 372 KITDGEVT--SSISKFLNEEIISNIKTKVEAKDDDLILMLADKNDIVLNSLGALRCVIAK 429

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E+ ++N N +  CWI+DFP +E++EEEK+    H+PFT P+        ++   + A  Y
Sbjct: 430 EMNLLNPNEYNLCWIVDFPLFEYDEEEKRYVSKHHPFTHPKDEDIKYLESNPEKVYAKAY 489

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR + S++  + F  +G++KE  E +FG L  A + G PPHGG+A G
Sbjct: 490 DIVINGDELGGGSIRINNSDLQNRMFKALGLTKEETEIKFGFLLEALKYGTPPHGGLAFG 549

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR++MLL G  N+++V  FP +Q+  DLL  +P  VS  QL EL L+I
Sbjct: 550 LDRLIMLLAGTNNIKDVIAFPKTQSASDLLTDAPCIVSEAQLEELNLKI 598


>gi|53804174|ref|YP_114214.1| aspartyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|62287536|sp|Q607I4|SYD_METCA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|53757935|gb|AAU92226.1| aspartyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 599

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 236/593 (39%), Positives = 351/593 (59%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG++  S +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F +A+
Sbjct: 2   RSHRCGEVNESLLGQEVGLCGWVHRRRDHGGVIFVDLRDREGLVQVVFDPDHPEPFSLAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +VRSE+V+ + G V +R   T N N+ +G++E+ A  +EIL+ +E  P P+  + E  E 
Sbjct: 62  TVRSEYVIRVVGQVRARPEGTENPNLKSGRVEVLATSLEILNRSETPPFPIESDIEVNEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR++DLRR  + + +  R  I   +R  +    F E  TP LT ++PEGARD+LVP
Sbjct: 122 MRLRYRYIDLRRPVMQQRMRLRRDITRFLRNFLDHHGFYEIETPFLTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR +  SF+ALPQ+PQ YKQLLM SG DRY+Q+  CFRDED R+DR P EF QLD+E SF
Sbjct: 182 SRTHPHSFFALPQSPQLYKQLLMISGMDRYYQVVRCFRDEDLRADRQP-EFTQLDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D I+  ME ++R +F E  N   + + F R+ Y +A+RRY +DKPDLR P+ + ++ 
Sbjct: 241 MNEDQIMTLMEAMIRDLFRETLN-EELPDPFPRMTYAEAMRRYASDKPDLRIPLELVDIA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF+   + +P   V A+   GGG  +R   D +  +    G  GLAY+   
Sbjct: 300 DLMAGVEFKVFAGP-AADPEGRVVALKLPGGGDLSRKDIDDLTRFVGIYGAKGLAYVKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+ K +       I  R + Q GD  FF A             R  + Q
Sbjct: 359 DLGAGLEGLQSPILKFMPESTIRGILERTEAQTGDLIFFGADKARIVNESMGALRVKLGQ 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           + G++    +   W+ DFP +EW+E+  +    H+PFT P+   E L+ N   ++ +  Y
Sbjct: 419 DRGLVE-KGWRPLWVTDFPMFEWDEKSGRWVALHHPFTAPKCSEEQLRQNPGRAL-SRAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG EI  G +R H +E+    F  +GI +E  + +FG L  A + G PPHGG+A G
Sbjct: 477 DMVLNGTEIGGGSVRIHRTEMQQTVFDLLGIGEEEAQQKFGFLLNALRYGCPPHGGLAFG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           +DR+VML+ GA ++REV  FP +Q+    L+ +P+ V+  QL ELG+R+ +NP
Sbjct: 537 LDRLVMLMSGASSIREVMAFPKTQSAWCPLIDAPAQVNDAQLHELGIRLRKNP 589


>gi|288940461|ref|YP_003442701.1| aspartyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288895833|gb|ADC61669.1| aspartyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 592

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/592 (41%), Positives = 342/592 (57%), Gaps = 10/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CGDL     G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 2   RTQYCGDLNSQHTGQEVVLCGWVQRRRDHGGVIFIDLRDREGLVQVVFDPDRAEVFARAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
            VRSE+VL I G V  R   TIN ++ TG+IE+    +EIL+ AE  P+ +     +  E
Sbjct: 62  QVRSEYVLKITGRVRPRPEGTINPDLSTGEIEILGLDLEILNAAETPPIQLDSHAADASE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLRR  +   +  R+R+  +MR  +    F++  TPILT S+PEGARD+LV
Sbjct: 122 ELRLRYRYLDLRRPEMQARLRTRSRVTQAMRRFLDERGFLDIETPILTKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + G F+ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD+E+S
Sbjct: 182 PSRTHPGEFFALPQSPQLFKQLLMMSGLDRYYQIARCFRDEDLRADRQP-EFTQLDIEVS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +D+++  ME ++R +F E   G  + + F R+ Y +A+RR+G+D+PDLR P+ + +V
Sbjct: 241 FMSEDELMGLMEGMIRSLFSEVI-GVELPDPFPRLTYAEAMRRFGSDRPDLRVPLELIDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     +F+VF+       G  V     KGG  +R   D   ++    G  GLAYI  +
Sbjct: 300 ADLMDGVDFQVFAGPAKDPEGRVVALRLPKGGELSRKEIDGYTQFVGIYGAKGLAYI--K 357

Query: 363 LDE---SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           ++E    G      P+ K L     E I  R    DGD  FF A             R  
Sbjct: 358 VNEWAAKGREGLQSPILKFLPDATVEGIMARTGAVDGDLIFFGADKARVVNESIGALRVK 417

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + Q+ G++    +   W++DFP +E +    +    H+PFT P+     L  +D  +  +
Sbjct: 418 LGQDRGLLEGE-WRPLWVVDFPMFEHDPANGRWVALHHPFTAPKDEHLGLLESDPGACLS 476

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H   V  Q F  + IS E  E RFG L +A + G PPHGG+
Sbjct: 477 RAYDMVLNGTELGGGSIRIHRDAVQRQVFKLLNISDEQAEERFGFLLKALRFGCPPHGGL 536

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VML+ GA ++R+V  FP +Q    LL  +PSTV   QL+EL LR+
Sbjct: 537 AFGLDRLVMLMTGAGSIRDVMAFPKTQTAACLLTDAPSTVDEAQLKELSLRL 588


>gi|163814884|ref|ZP_02206272.1| hypothetical protein COPEUT_01035 [Coprococcus eutactus ATCC 27759]
 gi|158449823|gb|EDP26818.1| hypothetical protein COPEUT_01035 [Coprococcus eutactus ATCC 27759]
          Length = 605

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 236/591 (39%), Positives = 353/591 (59%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           R+H C ++  +++G  V + GWV + R  GGIIF+D+RD  GI QV+   A   + CF+ 
Sbjct: 10  RSHRCTEVNSTNIGEKVTVMGWVAKSRNKGGIIFVDLRDRSGILQVIFEEAQCGTECFDK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+V+ I+G V  R A  +N N+ TG IE+ A  + ILS AE  P P+    +  
Sbjct: 70  AGKLRSEFVVAIEGTVCKR-AGAVNENLATGDIEVVATSLRILSEAETPPFPIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L +N++ ++++    R  M  E F+E  TP+LT S+PEGARD+L
Sbjct: 129 EELRLKYRYLDLRRPDLQRNLMMKSKVAGIARQFMADEGFLEIETPMLTKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQIARCFRDEDLRADRQP-EFTQMDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ +D+++  E +L  +F+E  + + +     R+ + +A+ R+G+DKPDLR  + + +
Sbjct: 248 SFVDVEDVIDVNERLLAKLFKEVLDLD-IQLPIQRMTWQEAMDRFGSDKPDLRFGLELKD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V++      F VF+  L    G  V  I A+G G   R   D + E+A++ G  GLAYI 
Sbjct: 307 VSDIVKDCGFGVFTGAL--ENGGTVRGINAEGQGSMPRKKIDALIEYAKTYGAKGLAYIV 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             ++E G+       AK +      A+   ++ + GD   F A       +     R H+
Sbjct: 365 --INEDGSYK--SSFAKFMTDEQMSALVNAMEGKPGDLLLFAADKKKVVWTVLGALRCHL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ +G+++ N F F WI +FP  EW++EE +    H+PFTMP         +D   ++A 
Sbjct: 421 AELMGLVDKNEFRFVWITEFPLLEWSDEENRFTAMHHPFTMPMEEDLQYIDSDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H ++V  + F  +G +K     RFG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIHQNDVQEKMFECLGFTKAQAHERFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VML+    ++R+V  FP  ++    +  +P  V  +QL ELG+ +
Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASCPMTNAPDRVDDKQLAELGIEV 591


>gi|104783076|ref|YP_609574.1| aspartyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|123255376|sp|Q1I6E5|SYD_PSEE4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|95112063|emb|CAK16790.1| aspartyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 591

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/596 (41%), Positives = 353/596 (59%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRAETFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R    +N N+ +G IE+   ++ +L+ AE  P P+    +  E 
Sbjct: 63  RVRSEYVVQITGKVRKRPEGAVNTNMASGAIEILGYQLNVLNEAETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R +YRF+DLRR  +   +  R+RI +S+R R + EN F++  TPILT ++PEGARD+LV
Sbjct: 123 TRLRYRFIDLRRPEMADKLRLRSRITSSIR-RFLDENGFLDVETPILTRATPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 182 PSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++ +I+   E+++R +F+E  +       F  + +++A+RRYG+DKPDLRNP+ + +V
Sbjct: 241 FLDESEIMGLTESMIRKLFKEVLDLEF--GEFPHMTFEEAMRRYGSDKPDLRNPLELVDV 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     +F+VF+   + +P   V A+   GG    R+  D   ++    G  GLAYI  
Sbjct: 299 ADQLKDVDFKVFAGPAN-DPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGAKGLAYIKV 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G      P+ K++   N   I  R+   DGD  FF A D  K  S A  A R  +
Sbjct: 358 NERAKGVEGLQSPIVKNIPEANLNNILDRVGAVDGDIVFFGA-DKFKVVSEALGALRIRL 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +  ++ C  +   W++DFP +E N E+      H+PFT P+   E L+ N   ++ + 
Sbjct: 417 GHDFELLTCE-WAPMWVVDFPMFEEN-EDGSFTALHHPFTAPKCTPEELEANPATAL-SR 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  E+    F  +GI     E +FG L  A + G PPHGG+A
Sbjct: 474 AYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIEAAEQEEKFGFLLDALKFGAPPHGGLA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VML+ GA+++REV  FP +Q+   ++  +P  V  + LREL +R+ E  K
Sbjct: 534 FGLDRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGLVDAKALRELHIRLREQTK 589


>gi|62184723|ref|YP_219508.1| aspartyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81313092|sp|Q5L734|SYD_CHLAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62147790|emb|CAH63536.1| putative aspartyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 584

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/594 (40%), Positives = 347/594 (58%), Gaps = 16/594 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
           +YRTH C +L +S+VG  VRLSGWVHR R HGG++F+D+RD +GITQ+V   D      +
Sbjct: 2   KYRTHRCNELSLSNVGERVRLSGWVHRYRNHGGVVFIDLRDRFGITQIVCREDEKPELHQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
           +  SVRSEWVL I+G V  R     NAN+ TG+IE+  +K++ILS A+ LP  +  +   
Sbjct: 62  LVDSVRSEWVLSIEGTVCRRLEGMENANLATGEIEVDIEKVDILSKAKNLPFSISDDHIH 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LD+RR  +   +V R +++ + R  M  + F E  TPIL  S+PEGARD
Sbjct: 122 VNEELRLEYRYLDMRRGQILDRLVHRHKVMMACRQYMDKQGFTEVVTPILGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  GSFYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+D+
Sbjct: 182 YLVPSRIYPGSFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFAQIDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF   +D+   +E ++  +F     G  +     R+ Y +A   YGTDKPDLR  + +
Sbjct: 241 EMSFGTPNDLFPIIEQLVVEMFA--VQGIKIDLPLPRMTYQEAKDLYGTDKPDLRFGLQL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           H+  EH     F +F   L+     + + +P  G   +R   D   E+ +  G  GL +I
Sbjct: 299 HDCREHAKEFSFSIFLDQLAQGGTIKGFCVPG-GADMSRKQLDVYTEFVKRYGAMGLVWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARN 418
             +  ESG  +    VAK  +    +A+      Q+ D    IA  P    + + D  R 
Sbjct: 358 --KKQESGIASN---VAKFASEAVFQAMFADFGAQNNDILLLIAA-PEDVANQSLDHLRR 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+E    N   + F WI DFP +   +E+ KI   H+PFT P      L   D LS++
Sbjct: 412 LIAKERNFYNEAQYNFVWITDFPLFA--KEDGKICSEHHPFTSPLDEDIPLLDKDPLSVR 469

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG+EIASG  R H +++  + FS + +S E ++ +F     A   G PPH G
Sbjct: 470 SSSYDLVLNGYEIASGSQRIHNADLQNKIFSILELSPESIKEKFDFFIDALSFGTPPHLG 529

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IA G+DRI+M+L GA+ +REV  FP +Q   DL+M +P+ +   QL+EL +++ 
Sbjct: 530 IALGLDRIMMVLTGAEGIREVIAFPKTQKAADLMMDAPAEIMTSQLKELSIKVT 583


>gi|332296917|ref|YP_004438839.1| aspartyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180020|gb|AEE15708.1| aspartyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 605

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/611 (40%), Positives = 351/611 (57%), Gaps = 33/611 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           RT +CGDL  +D+G  V L+GW+HR R HGGI F+++RD YG+TQVV + DS       A
Sbjct: 6   RTATCGDLRKADIGKAVTLNGWIHRKRDHGGISFINLRDRYGLTQVVVDSDSPAELAATA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-----GE 117
             ++ E+ + ++G+V  R    INA++ TG++E+ A++I ILS ++ LP  +      G 
Sbjct: 66  ADLKMEYCVAVEGIVRGRPDSMINADMPTGEVEVVAKRISILSKSDVLPFMIDELNKDGT 125

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           R  P E +R K+R+LDLR  ++  ++  R ++  ++R  + A NF E  TP    S+PEG
Sbjct: 126 RVVPNEDLRLKFRYLDLRTASMQHHLALRHKVTIAVRNYLDAHNFYELETPTFIKSTPEG 185

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR+  G FYALPQ+PQ YKQLLM SGFDRYFQIA C+RDED R DR P EF Q
Sbjct: 186 ARDYLVPSRLYPGKFYALPQSPQLYKQLLMVSGFDRYFQIARCYRDEDARGDRQP-EFTQ 244

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +DMEMSFV +DD+L   E +++ VF+E + G  ++  F RI YDDAI  YG+DKP+LR  
Sbjct: 245 IDMEMSFVSRDDVLAMTEGMMQAVFKE-TMGIDLALPFQRIAYDDAIDWYGSDKPELRFG 303

Query: 297 IIMHNVTEHFVHSEFRVFSKILS------VNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
           + M +         F+ F   L+      V    +   +       +R   + +   A+ 
Sbjct: 304 MKMQDGAFLAELGTFQAFKDALAPDEKGCVTGAVKALVVSGAAEAYSRKKIEELESAAKI 363

Query: 351 QGQPGLAYIFWRLDESGNVAGM-------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403
               GL ++         VAG        G +AK  +    + +  RL  + GD   F+A
Sbjct: 364 YKARGLGWM--------KVAGTPDAPLLEGGIAKFFDGKAGD-VCARLGAKTGDLLLFVA 414

Query: 404 GDPLKF-CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
               K  C+     R  + ++LG+ + + F F WI+DFP +EWNE+E K D AH+ FTMP
Sbjct: 415 DTKKKTACTALGAVRTRLGKDLGLCDPDAFAFAWIVDFPMFEWNEDECKWDTAHHMFTMP 474

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           Q    +   +D  S+K   YDLV NG+E+ASG IR H  ++  + F  VG  +   + +F
Sbjct: 475 QEKYHATLESDPGSVKGDLYDLVLNGYELASGSIRIHDPDLQKRIFKIVGFDEAEGQKKF 534

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           G L  AF+ G PPHGGIA G+DR+VML+    +++EV  FP +      +   PS V  +
Sbjct: 535 GFLTEAFKYGAPPHGGIAPGLDRLVMLMCKETSIKEVIAFPKNTFAQSPMDDCPSEVDQK 594

Query: 583 QLRELGLRIVE 593
           QL EL L I E
Sbjct: 595 QLDELHLIIKE 605


>gi|24380434|ref|NP_722389.1| aspartyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|46577480|sp|Q8DRV9|SYD2_STRMU RecName: Full=Aspartyl-tRNA synthetase 2; AltName:
           Full=Aspartate--tRNA ligase 2; Short=AspRS 2
 gi|24378460|gb|AAN59695.1|AE015031_11 aspartyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 589

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/599 (38%), Positives = 358/599 (59%), Gaps = 23/599 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP +A   +   
Sbjct: 3   RSMYAGAVRSEHIGQELTLKGWVARRRDLGGLIFIDLRDREGIVQLVINPKTASNTVVKS 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G+++ R  +  N N+ TG +E+   ++ IL+ ++  P  +  + E  
Sbjct: 63  AESLRSEYVIEVTGMIVER--DQANDNLPTGCVEMQVTQLTILNASQTPPFEIKDKIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + KN   R ++ + +R  +   +FI+  TP+L  S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLKNFKLRAKVTHVIRNYLDDLDFIDVETPMLAKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+++G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRMSRGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I    E ++  V +E   G  +     +I YD A+  YG+DKPD R  + + +
Sbjct: 240 SFLSEQEIQEITERLIACVMKEVK-GIELQLPLPQISYDTAMNNYGSDKPDTRFEMTLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +T+   + +F+VFS+  +V       AI AK    +  R   D++ +  +  G  GLA++
Sbjct: 299 LTDLVKNIDFKVFSQAPAVK------AIVAKNAANSYSRKAIDKLTDIVKPFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            +   + G     GP+AK L  +  E I  RL ++  D  FF+A D L+  + +  A RN
Sbjct: 353 KYNDGKIG-----GPIAKFLTTIEDELIE-RLQLEANDLVFFVADD-LEIANGSLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           H+A+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ    +    DL  ++
Sbjct: 406 HLAKELNLIDHSKFNFLWVVDWPMFEWSEEENRYTSAHHPFTLPQEDTVAELEGDLSKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E   + F  +G +KE  + +FG L  A   G PPHGG
Sbjct: 466 AVAYDIVLNGYELGGGSLRINQRETQERMFKALGFTKESAQKQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DR VMLL G +N+REV  FP +    D +  +PS VS +QL EL L++ +N  K
Sbjct: 526 LALGLDRFVMLLAGKENIREVIAFPKNNKASDPMTQAPSLVSDKQLDELYLQVNKNAVK 584


>gi|315444699|ref|YP_004077578.1| aspartyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|315263002|gb|ADT99743.1| aspartyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 590

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/596 (41%), Positives = 340/596 (57%), Gaps = 28/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT + G L  +D G  V L+GWV R R HGG+IF+D+RD  G++QVV   D A  E A  
Sbjct: 3   RTRTAGSLRPADAGQTVTLAGWVARRRDHGGVIFIDLRDASGVSQVVFR-DGAVLEQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + + G+V  R     NA+I TG++E++A  + +L  +  LP  +  +    E  
Sbjct: 62  LRSEFCVAVTGVVEIRPEGNANADIPTGEVEVNATSLTVLGESAALPFQL--DETAGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+     I  R+++  + R  + A +F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRREVPGNAIRLRSKVNAAARGVLAAHDFVEIETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + DD++   E VLR V+     G  +     RI Y DA+RR+G+DKPDLR  + +   TE
Sbjct: 239 DADDVMAVSEEVLRAVWATI--GYDLPLPLPRISYADAMRRFGSDKPDLRFGLELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+   GG    R   D   E+A+ +G  GLAY+   +
Sbjct: 297 YFADTPFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPVAK+L       +   +    GD  FF AG      +     R  +A+ 
Sbjct: 348 GEDGEL--TGPVAKNLTDAERAGLTAHVGANPGDCVFFAAGTAKSARALLGATRIEVAKR 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473
           L +I+ + + F W++D+P +E   E     D A         H+ FT P    E+    D
Sbjct: 406 LDLIDPDAWAFTWVVDWPMFESAAEATASGDVAVGSGAWTAMHHAFTAPTPESEATFDTD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  +  YD+VCNG EI  G +R H  +V  + F+ +GISKE  E++FG L  AF  G 
Sbjct: 466 PGSALSNAYDIVCNGNEIGGGSLRIHRRDVQERVFAMMGISKEEAEDKFGFLLEAFTFGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGGIA G DRIV LL G  ++REV  FP S    D L  +P+ ++ +Q +E G+
Sbjct: 526 PPHGGIAFGWDRIVALLAGLDSIREVIAFPKSGGGVDPLTEAPAPITAQQRKESGI 581


>gi|257784225|ref|YP_003179442.1| aspartyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472732|gb|ACV50851.1| aspartyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 608

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 231/599 (38%), Positives = 351/599 (58%), Gaps = 14/599 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACF 59
           H   TH+CG+L    +G  V L+GWV R R  GG+IF+D+RD  G+TQ++ +PD  +  F
Sbjct: 20  HSMHTHTCGELRAEHIGQTVTLTGWVWRRRDFGGLIFVDLRDREGLTQILFDPDVNADVF 79

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+++R EW + I G V  RS    N  ++TG++E+ A KI++L+ +   P  +    +
Sbjct: 80  ATAETIRPEWPVLITGTVQHRSEGQTNEALVTGEVEVLASKIDVLNTSAVPPFQIENHID 139

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR++DLRR  + +N+  R+    ++R      +F E  TP L  S+PEGARD
Sbjct: 140 VNEDLRLKYRYVDLRRPQMAQNLRLRSDFAFALREAFHKRDFTEVETPALFKSTPEGARD 199

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR+  G+FYALPQ+PQ  KQLLM  G +RY+QI  CFRDED R+DR P EF Q+DM
Sbjct: 200 FLVPSRMQGGNFYALPQSPQLLKQLLMIGGVERYYQITKCFRDEDLRADRQP-EFTQVDM 258

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV +DD+++ +E++L   F +   G        +I Y DA+  YG+DKPD R  + +
Sbjct: 259 EMSFVREDDVMSELEDILGDAFAKM--GIEFPTPLRKIQYWDAMDTYGSDKPDTRIGMEL 316

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358
           H+V+  F  S F++FS   +   G  V AI  KG G   R+  D++ E A   G  GLA+
Sbjct: 317 HDVSGVFAQSGFKLFSSAANTE-GQFVKAINVKGAGTWPRSQVDKLAEVAAGFGAKGLAW 375

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           + ++  E G+V   GP+ K  +    EA+R  +  +  D   F  G  L+        R 
Sbjct: 376 VAFK--EDGSVG--GPITKFFSPEELEALRAEMSAEPKDLILFAVGGRLETDEILGGMRL 431

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           H+A+ L +      +F W+++FP + W+EE +     H PFT+P+     L   + L++ 
Sbjct: 432 HMARVLEVPR-EGHDFLWVVNFPLFHWDEETQSYASEHQPFTLPREEELDLLDTNPLAMG 490

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           ++ YD V +GFE   GG+R H +++ L+    +G ++E  + +FG L  A   G PP GG
Sbjct: 491 SYTYDFVMDGFEAGGGGMRIHNADLQLKILEKLGFTEERAKAQFGFLMEALTFGAPPMGG 550

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            A G+DR+ MLL G+ ++R+V  FP + +  DL+  +PS VS EQL+E+ L+ +  PK+
Sbjct: 551 FALGLDRVCMLLTGSDSIRDVMAFPKTTSGSDLMSSAPSPVSNEQLKEVSLQTL--PKE 607


>gi|329942396|ref|ZP_08291206.1| aspartyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287037|ref|YP_004421938.1| aspartyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313847634|emb|CBY16622.1| putative aspartyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325507318|gb|ADZ18956.1| aspartyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328815306|gb|EGF85294.1| aspartyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328914269|gb|AEB55102.1| aspartyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 584

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/594 (40%), Positives = 349/594 (58%), Gaps = 16/594 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
           +YRTH C +L +S+VG  VR+SGWVHR R HGG++F+D+RD +GITQ+V   D      +
Sbjct: 2   KYRTHRCNELSLSNVGERVRVSGWVHRYRNHGGVVFIDLRDRFGITQIVCREDEKPELHQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
           +  SVRSEWVL I+G V  R     NAN+ TG+IE+  +K+EILS A+ LP  +  +   
Sbjct: 62  LVDSVRSEWVLSIEGTVCRRLEGMENANLATGEIEVDIEKVEILSKAKNLPFSISDDHIH 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LD+RR  +   +V R +++ + R  M  + F E  TPIL  S+PEGARD
Sbjct: 122 VNEELRLEYRYLDMRRGQILDRLVCRHKVMMACRQYMDKQGFTEVVTPILGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  GSFYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+D+
Sbjct: 182 YLVPSRIYPGSFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFAQIDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF   +D+   +E ++  +F     G  +     R+ Y +A   YGTDKPDLR  + +
Sbjct: 241 EMSFATPNDLFPIIEQLVVEMFA--VQGIKIDLPLPRMTYQEAKDLYGTDKPDLRFGLQL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           H+  EH     F +F   L+     + + +P  G   +R   D   E+ +  G  GL +I
Sbjct: 299 HDCREHAKEFSFSIFLDQLAQGGTIKGFCVPG-GADISRKQLDVYTEFVKRYGAMGLVWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARN 418
             +  E+G  +    VAK  +    +A+      +D D    IA  P    + + D  R 
Sbjct: 358 --KKQENGIASN---VAKFASEAVFQAMFADFGAEDNDILLLIAA-PEDVANQSLDHLRR 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+E  + N + +   WI DFP +   +E+ KI   H+PFT P      L   D LS++
Sbjct: 412 LIAKERNLYNESQYNCVWITDFPLFA--KEDGKICSEHHPFTSPLDEDIPLLDKDPLSVR 469

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG+EIASG  R H +++  + FS + +S E ++ +FG    A   G PPH G
Sbjct: 470 SSSYDLVLNGYEIASGSQRIHNADLQNKIFSILELSPESIKEKFGFFIDALSFGTPPHLG 529

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IA G+DRI+M+L GA+ +REV  FP +Q   DL+M +PS +   QL+EL +++ 
Sbjct: 530 IALGLDRIMMVLTGAEGIREVIAFPKTQKAADLMMDAPSKIMTSQLKELNIKVT 583


>gi|326790255|ref|YP_004308076.1| aspartyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326541019|gb|ADZ82878.1| aspartyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 600

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/599 (39%), Positives = 360/599 (60%), Gaps = 12/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RTH C +L  ++VG  V + GWV R R  G I+F+ +RD  G+ Q+    N +   FE A
Sbjct: 10  RTHRCTELSAANVGQEVIVMGWVQRRRNLGQILFITLRDRSGLLQLSFNENTEKELFEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+V+   G+V+SR A+  N ++ TG IE+  +++ ILS AE  P  +  + +  E
Sbjct: 70  ETLRSEYVIAARGIVVSRGADA-NKSMQTGDIEIDVKELRILSEAETTPFEILEDIDTKE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + KN++ R+++  S+R  +  E F+E  TPI+  S+PEGARD+LV
Sbjct: 129 ELRLKYRYLDLRRPDMQKNLILRSKVTQSVRRFLETEGFLEIETPIMQKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G+FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+DME+S
Sbjct: 189 PSRVHPGNFYALPQSPQLFKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDMELS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE +D++   E +++ VF+E  + + V     ++ Y +A+ R+G+DKPDLR  + + ++
Sbjct: 248 FVEPEDVMAVNERLIQTVFKEALDVD-VQLPIQKMTYKEAMDRFGSDKPDLRFGVELQDL 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE      F VF    ++  G  V AI AKG G   R   D + ++ +  G  G+A+   
Sbjct: 307 TEVVKGCGFAVFEN--AIANGGTVRAINAKGMGDLGRKQIDALVKYGQDFGAKGVAWHQI 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D     +     AK L+     AI+ ++ +   D    +A  P    +     R  +A
Sbjct: 365 KTDGEEKSS----FAKFLSEKTLAAIKEKMSVDKDDLILIVADKPSVVFAALGALRLEVA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L +IN + F F WI +FP  E++EE  +    H+PFTMP      +   +  +++A  
Sbjct: 421 RRLDLINQDEFRFVWITEFPLLEYDEEAGRFVAMHHPFTMPMDEDLEMMETNPGAVRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL  NG E+  G IR + ++V  + F+ +G + E  E RFG L  AF+ G+PPHGG+A 
Sbjct: 481 YDLALNGCELGGGSIRIYQNDVQKRMFNLLGFTDEQAEERFGFLLNAFKYGVPPHGGLAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           G+DR++ML+  A ++R+V  FP  ++   L+  +P  V  +QL EL L IVE  +++++
Sbjct: 541 GLDRMIMLMCKADSIRDVIAFPKVKDASCLMTNAPDVVDQKQLDELALVIVEKQEEVIE 599


>gi|295094219|emb|CBK83310.1| aspartyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 610

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/592 (40%), Positives = 354/592 (59%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           R+H C ++  +++G  V + GWV + R  GGIIF+D+RD  GI QV+   +   + CFE 
Sbjct: 10  RSHRCTEVSSANIGEKVTVMGWVQKSRNKGGIIFVDLRDRSGILQVIFEESQCGAECFEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+V  I+G V  R A  +N N+ TG IE+ A  + ILS AE  P P+    +  
Sbjct: 70  AGKLRSEFVAAIEGTVCKR-AGAVNENLATGDIEVVASSLRILSEAETPPFPIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR KYR+LDLRR  L +N++ ++++    R  M  E F+E  TP+LT S+PEGARD+L
Sbjct: 129 EEIRLKYRYLDLRRPDLQRNLIMKSKVATIARQFMADEGFLEIETPMLTKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G+FYALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGTFYALPQSPQLFKQLLMCSGYDRYFQIARCFRDEDLRADRQP-EFTQMDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L  +F+E  + + +     R+ + +A+ R+G+DKPDLR  + + +
Sbjct: 248 SFVDVDDVIDVNERLLAKLFKEILDLD-IQLPIQRMTWQEAMDRFGSDKPDLRFGLELKD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V++     EF VF+  L+   G  V  I A+G G   R   D + E+A++ G  GLAYI 
Sbjct: 307 VSDVVKDCEFGVFTGALA--NGGTVRGINAEGQGSMPRKKIDALIEYAKTYGAKGLAYIV 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             ++E G+       AK +      A+   +D + GD   F A       +     R H+
Sbjct: 365 --INEDGSYK--SSFAKFMTEEQMNALVAAMDGKPGDLLLFAADKTKIVWTVLGALRCHL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ +G+++ N + F WI +FP  EW++EE +    H+PFTMP         +D   ++A 
Sbjct: 421 AELMGLVDKNVYRFVWITEFPLLEWSDEENRFTAMHHPFTMPMEEDLQYIDSDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H  ++  + F  +G +K     RFG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIHQDDIQEKMFECLGFTKAQAHERFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VML+    ++R+V  FP  ++   L+  +P  V  +QL ELG+ + 
Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASCLMTNAPDYVDDKQLAELGIEVT 592


>gi|160878711|ref|YP_001557679.1| aspartyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|189082092|sp|A9KIA6|SYD_CLOPH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|160427377|gb|ABX40940.1| aspartyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 598

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/595 (40%), Positives = 352/595 (59%), Gaps = 13/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60
           +RTH C +L  S+VG  V + GWV + R  GGIIF+D+RD  G+ Q++    +  +  FE
Sbjct: 9   HRTHRCTELSNSNVGEIVTVMGWVQKSRNKGGIIFVDLRDRSGLLQIIFEEGDIGTEMFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ + G V +RS   +N N++TG IE+ A ++ ILS +E  P P+    + 
Sbjct: 69  KASKLRSEFVVAVVGKVETRSG-AVNENLLTGTIEVRATELRILSESETPPFPIEEGSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  L +N++ R+++    R  +  E F+E  TP+LT S+PEGARD+
Sbjct: 128 KEELRLKYRYLDLRRPDLVRNLMLRSKVATLTRQFLSDEGFLEIETPMLTKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G+FYALPQ+PQ +KQLLM SG+DRYFQI  CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGNFYALPQSPQIFKQLLMVSGYDRYFQIVKCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E +L+ +F+E S G  VS    R+ + +A+ RYG+DKPD R  + + 
Sbjct: 247 LSFVDVDDVISVNERLLQKMFKE-SIGIDVSLPIQRMTWREAMDRYGSDKPDTRFGMELK 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           NV+E      F VF+  L    G  V  I A G G   R   D + E+A+  G  GLAY+
Sbjct: 306 NVSELVKDCGFAVFTGAL--ENGGSVRGINANGQGEMPRKKIDALIEFAKGYGAKGLAYL 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              ++E G        +K +      A+   ++ + GD  FF A           + R  
Sbjct: 364 --SINEDGTYK--SSFSKFMTEEELSALVAAMEAKPGDLLFFAADKDKVVFDVLGNLRLE 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ L +++ N + F W+ +FP  E++EEE +    H+PFTMP      L   D   ++A
Sbjct: 420 IARNLELLDKNTYNFLWVTEFPLLEYSEEEGRYTAMHHPFTMPMDEDLPLLETDPGKVRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G +R   + V  + F  +G +KE    RFG L  AF+ G+PPH G+
Sbjct: 480 KAYDIVLNGTEVGGGSVRIFQNNVQEKMFEVLGFTKEEAYERFGFLLNAFKYGVPPHAGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR+VML+    ++R+V  FP  ++   LL  +P+ V  +QL EL + + + 
Sbjct: 540 AYGLDRLVMLMAKEDSIRDVIAFPKVKDASCLLTDAPNVVDDKQLEELSIALAKK 594


>gi|237750881|ref|ZP_04581361.1| aspartyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229373326|gb|EEO23717.1| aspartyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 588

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/595 (40%), Positives = 346/595 (58%), Gaps = 18/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH    L   D+G  V L GW +  R HGG++F+D+RD  GI Q+VA+P S    IA S
Sbjct: 2   RTHYNTALSTDDIGKEVTLCGWCNSYRDHGGVVFIDLRDKSGIIQLVADPSSKAHTIASS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR E+VL   G V +R    +N  + TG IE+    + I + A+  P+ + G+    E +
Sbjct: 62  VRDEYVLLAKGRVRARGEGLVNPKLKTGAIEVVLDTLTIENKAQTTPI-IIGDESVNEEL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR          R +I +  R  + +  F+E  TPILT ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSQKSLDIFKLRAKIASVTRNFLESHGFLEVETPILTKATPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ GSFYALPQ+PQ +KQLLM SGF+RY+QIA CFRDED R+DR P EF Q+D+EMSF 
Sbjct: 181 RVHDGSFYALPQSPQLFKQLLMMSGFERYYQIAKCFRDEDLRADRQP-EFSQIDVEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           E+ D++   E+++  +F+  + G ++S     + Y DA+  YG+DKPDLR  + +  V +
Sbjct: 240 EEKDVMQIAEDLILEIFK--ACGKSISYKIPHLDYMDAMECYGSDKPDLRFDMPLVEVAD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            FV S   +F +I        + A+  + G    +R     + ++ R+ G  GLAYI  +
Sbjct: 298 LFVSSNNDIFKEIALDTKANRIKALCVRDGDSKFSRKSLADLEKFVRNFGAKGLAYIQVK 357

Query: 363 LD------ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +      ES + +  GP+ K L   + +A+  R+  + GD  FF AG+      +    
Sbjct: 358 EECKSFDRESIDESLKGPLTKFLTEDSIQALLQRVGAKKGDIIFFGAGEKHVVWDYMGRL 417

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +A +L +I  +   F W+++FP +E  +E   I   H+PFTMP+   ES    D+ S
Sbjct: 418 RLEVANQLNLICADKLSFVWVVNFPMFEKTDE--GIKALHHPFTMPKNIDES----DIES 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I++  YD+V NG E+  G IR H SE+  + F  + ISKE    +FG L  A Q G PPH
Sbjct: 472 IQSIAYDIVLNGVELGGGSIRIHKSEIQSKIFDLLQISKEEANEKFGFLLEALQYGTPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GG A G DR+VMLL GA ++REV  FP +Q    LLM +PS+V+  QL EL +++
Sbjct: 532 GGFAIGFDRLVMLLSGATSIREVIAFPKTQKASCLLMEAPSSVTTLQLNELHIKL 586


>gi|15675898|ref|NP_270072.1| aspartyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|24212418|sp|Q99XL0|SYD_STRP1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|13623134|gb|AAK34793.1| putative aspartyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
          Length = 582

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/593 (39%), Positives = 353/593 (59%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++   
Sbjct: 3   RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++G V +R  +  N  + TG +EL    + IL+ A+  P  +  + E  
Sbjct: 63  AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +T     ++F+VFS+  +V       AI  KG     +R   D++ E+A+  G  GLA  
Sbjct: 299 LTVTVKGNDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W     G +A  GPVAK L  + TE +  +L + + D   F+A D L+  +    A RN
Sbjct: 351 -WVKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++
Sbjct: 406 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I
Sbjct: 526 LAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 578


>gi|291276850|ref|YP_003516622.1| aspartyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964044|emb|CBG39884.1| aspartyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 580

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/589 (39%), Positives = 342/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH C +L  +++G  VRL+GW +  R HGG++F+D+RD  G+ Q+V +P S  + +A S
Sbjct: 3   RTHLCANLDETNIGEEVRLAGWCNTYRDHGGVVFIDLRDKSGLIQLVCDPSSKAYSLASS 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R E+VL I G V +R     N  + TG IE+    + I + ++  P+ + G+    E +
Sbjct: 63  IRDEYVLLISGKVRARGEGLQNPKLKTGNIEVVVDSLIIENPSKTPPISI-GDEGVSEEL 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR+LDLR     +    R+ +   +R  + A +FIE  TPILT ++PEGARD++VPS
Sbjct: 122 KLKYRYLDLRSAKSFEIFKMRSEVCKLIRDTLHALDFIEVETPILTKATPEGARDYVVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ G F+ALPQ+PQ +KQLLM SG DRYFQIA CFRDED R+DR P EF Q+D+EMSF 
Sbjct: 182 RVHDGEFFALPQSPQIFKQLLMVSGLDRYFQIAKCFRDEDLRADRQP-EFSQIDVEMSFC 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            Q+D++   E +++ +F   S    V   F R+ Y +A+ +YG+DKPDLR  + +  +++
Sbjct: 241 TQEDVMEVAEILIKNIFR--SKNIEVQTPFRRMDYQEAMEKYGSDKPDLRFEMPLFEISD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
               S   +F  I          A+  K G     R       E+ R  G  GLAY+  +
Sbjct: 299 LMQDSSNAIFQSIAKDVKKNRFKALVVKNGDHFFTRKTLGEAEEFVRKFGAQGLAYL--Q 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K ++  N   I  R+    GD  FF AG+      +    R  IAQ
Sbjct: 357 IKEEGP---KGPLVKFISQENLGKILERVGASSGDIIFFGAGEKSLVWDYMGRLRLKIAQ 413

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ++G+I  + +EF W++DFP +E  + E K    H+PFTMP+     +   D+ +IK+  Y
Sbjct: 414 DMGLIQSDRYEFLWVVDFPMFE--KTEGKFSALHHPFTMPK----DIDNPDIETIKSIAY 467

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  +GISKE  E +FG L  A   G PPHGG A G
Sbjct: 468 DIVLNGVELGGGSIRIHKEEIQQKVFEILGISKEEAEEKFGFLLEALSFGAPPHGGFAIG 527

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR+VMLL  + ++R+V  FP +Q     L  +PS +S +QLREL +R+
Sbjct: 528 LDRLVMLLTHSPSIRDVIAFPKTQKATCPLTDAPSAISEQQLRELHIRL 576


>gi|260893519|ref|YP_003239616.1| aspartyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865660|gb|ACX52766.1| aspartyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 597

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/592 (41%), Positives = 344/592 (58%), Gaps = 15/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
           YRTH CG LG +++G  V L+GWV R R HGG+IF+D+RD  G+ QVV +PD+    F +
Sbjct: 3   YRTHYCGTLGEAEIGQKVVLAGWVQRRRDHGGLIFVDLRDREGLVQVVFSPDTDPEAFAV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VRSE+VL ++G V  R   T N  + TG IE+ A    IL+ +   P  +       
Sbjct: 63  AEKVRSEYVLRVEGEVHRRPPGTENPKLKTGTIEVRATSCTILNPSRTPPFYIEDGINVD 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +YR+LDLRR  + + +  R R    +R  + A  F E  TP+LT S+PEGARD+L
Sbjct: 123 EDLRLRYRYLDLRRPEMQEALRLRHRAAKVVRDYLDAHGFWEVETPMLTRSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM +G DRYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 183 VPSRIYPGRFYALPQSPQLFKQLLMVAGVDRYFQIVRCFRDEDLRADRQP-EFTQIDLEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE +DIL   E ++  +  E   G  VS  F RI Y +A+  YGTD+PD+R  +++ +
Sbjct: 242 SFVEVEDILRLSEGLIATLCREIV-GVEVSLPFPRISYQEAMSLYGTDRPDIRYDLLLTD 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           V++     EF+VFS+ +      +  A+P   G  N  R   D +   A   G  GLAYI
Sbjct: 301 VSDLVAEVEFKVFSQAVKEGGCVKGLAVP---GAANFSRKEIDELTRLAALFGAKGLAYI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +L   G  +   P+ K L     EA+R RL   +G    F+A             R++
Sbjct: 358 --QLLPEGPKS---PILKFLGEGVVEALRQRLQAGEGALLLFVADKREVVERSLGALRSY 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +AQ+LG+       F W++DFP  E++  E +    H+PFT P+     L   +   ++A
Sbjct: 413 LAQKLGLEKPG-LSFVWVVDFPLVEFDPAEGRYVTLHHPFTAPREEDVPLLETEPEKVRA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG E+  G IR +  ++  + F  +G+  E   ++FG L  A + G PPHGGI
Sbjct: 472 KAYDLVLNGVELGGGSIRINRRDLQEKVFRLIGLDLEEARDKFGFLLEALEYGAPPHGGI 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G DR++MLLLG + +R+V  FP +Q   DLL  +PS V+ EQLREL LR+
Sbjct: 532 AFGFDRLLMLLLGRQTIRDVIPFPKTQRAQDLLTQAPSPVTEEQLRELHLRV 583


>gi|167756852|ref|ZP_02428979.1| hypothetical protein CLORAM_02401 [Clostridium ramosum DSM 1402]
 gi|167703027|gb|EDS17606.1| hypothetical protein CLORAM_02401 [Clostridium ramosum DSM 1402]
          Length = 585

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/596 (39%), Positives = 354/596 (59%), Gaps = 16/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L +SDV   V L GWV + R  G ++F+D+RD YGITQ+V N +     + K 
Sbjct: 3   RTHNNGELRISDVNKIVELKGWVAKKRNLGSLVFIDLRDRYGITQIVLNEEMEA--LGKD 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +++E+VL + G V+ RS++  N N+ TG IE+ A +I+I++ A+  P+    + +  E  
Sbjct: 61  IKNEYVLHVVGKVIERSSK--NPNMPTGDIEIEAAQIDIINTAKVTPIYTTDDTDASEDA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR  +   I+ R +I +S+R  +    FI+  TP L  S+PEGARDFLVPS
Sbjct: 119 RMQYRYLDLRRPVMQNKIIMRHKITSSIRNFLDNHEFIDIETPYLNRSTPEGARDFLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ GSFYALPQ+PQ +KQLLM SGF+RY+QIA CFRDED R DR P EF Q+D+EMSF+
Sbjct: 179 RVHNGSFYALPQSPQLFKQLLMVSGFERYYQIARCFRDEDLRLDRQP-EFTQVDVEMSFM 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             D+I++  E +L  V ++   G  +     R+ + +A+ +YG DKPD+R  + + N+ E
Sbjct: 238 TTDEIISIGEQLLAQVMKDVK-GIELQLPLPRMTWHEAMEKYGIDKPDIRFGLELVNLNE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIFWR 362
                EF VF   L  + G+ V  I  KG   N  R   D++ +  ++    GLA   W 
Sbjct: 297 VVKDVEFMVFKSALEAD-GH-VKGINVKGEADNFSRKAIDKLTDVVKTYKAKGLA---WL 351

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADARNHIA 421
             ++G     GP+AK  N      +   +D  D D   F++       C   A  RNH+ 
Sbjct: 352 KVKAGKAE--GPIAKFFNEEQMTKLLKAMDASDNDLLLFVSDAKYNVVCDALAALRNHLG 409

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL + N + F F W++DFP +E+++E ++    H+PFT P+        ND  +  A  
Sbjct: 410 KELKLFNPDEFAFLWVVDFPMFEYDDETERYYAVHHPFTRPKDSDIDKIENDPANCLADA 469

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NGFE+  G  R +  E+  +AF  +G ++E ++++FG    AFQ G PPHGG A 
Sbjct: 470 YDIVLNGFELGGGSQRIYEQELQERAFRALGFTQERIDSQFGWFVEAFQYGTPPHGGFAL 529

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+ MLL G++N+REV  FP + +    +  +PS V   QL ELG+ ++E+ ++
Sbjct: 530 GLDRLAMLLTGSENIREVIAFPKNASAVCPMSKAPSEVDNAQLEELGIAVIEDEQE 585


>gi|328945231|gb|EGG39385.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 584

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/591 (39%), Positives = 346/591 (58%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+   
Sbjct: 3   RSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIEVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRIHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+   +I +  E ++  V +E + G  V   F R+ YDDA+  YG DKPD R  +++ +
Sbjct: 240 SFLSDQEIQDITEGLIARVMKE-TKGIDVKLPFPRMKYDDAMALYGVDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE      F+VFS+     P  +   +       +R   D++ E A+  G  GLA   W
Sbjct: 299 LTELVKGVGFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLA---W 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G +AG  P+AK L  + T  +   L +++ D   F+A D L+  + A  A R  +
Sbjct: 352 VKVIDGELAG--PIAKFLTDL-TSPLTETLQLENNDLVLFVA-DTLEVANAALGALRVRL 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A 
Sbjct: 408 GKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+A
Sbjct: 468 AYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++
Sbjct: 528 LGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQV 578


>gi|224103793|ref|XP_002313196.1| predicted protein [Populus trichocarpa]
 gi|222849604|gb|EEE87151.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/599 (40%), Positives = 346/599 (57%), Gaps = 24/599 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT+ CG L  +DVG+ VRL GWV   R HGG+ FL++RDH GI  V  +PD       I 
Sbjct: 74  RTNFCGQLSTNDVGTRVRLCGWVALHRVHGGLTFLNLRDHTGI--VATSPDEFPDAHSII 131

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF----GE 117
             +R E+V+ ++G V SR  E++N  +ITG IE+ A+ +++L +V  +LP  V      +
Sbjct: 132 NDLRVEYVVVVEGFVRSRPVESVNKKLITGSIEVVAEHVQLLNAVKAKLPFLVTTADDAK 191

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEG 176
               E IR +YR LDLRR  +  NI+ R R++  +R  +   + F+E  TPIL+ S+PEG
Sbjct: 192 DSVKEEIRLRYRCLDLRRQQMSSNIMLRHRVVKLIRRYLEDVQGFVEIETPILSRSTPEG 251

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR+  G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Q
Sbjct: 252 ARDYLVPSRIQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQ 310

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDME++F   +D+L   E+++R VF E   G  + N   R+ Y +A+ +YG+D+PD R  
Sbjct: 311 LDMELAFTTLEDMLRLNEDLIRKVFLEI-KGVQLPNPIPRLTYAEAMSKYGSDRPDTRFD 369

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAF--CDRMNEWARSQGQ 353
           + +  V++ F  S FRVF+  L+     +V  +P+      N A    D  NE  +S G 
Sbjct: 370 LHLKEVSDIFAESSFRVFADSLNSGGIIKVLCVPSGAKSYSNSALKKGDIYNEAIKS-GA 428

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GL   F ++ + G + G+  +   L+  N E +  R     GD   F  G         
Sbjct: 429 KGLP--FLKVLDDGELEGISALVSSLDSTNKEQLLSRCSAGPGDLILFAVGHHPSVHRTL 486

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGN 472
              R  IA +LG+++ +     W+ DFP +EWNE E++++  H+PFT P    ME     
Sbjct: 487 DRLRLFIANQLGLVDHSRHSILWVTDFPMFEWNETEQRLEALHHPFTAPNPEDME----- 541

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DL S +A  YD+V NG EI  G +R +  EV  +    VGIS E  E +FG L  A   G
Sbjct: 542 DLSSARALAYDMVYNGVEIGGGSLRIYKREVQQKVLEIVGISPEQAEAKFGYLLEALDMG 601

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            PPHGGIA G+DR+ MLL GA ++R+V  FP +      L  +PS V  +QLR+L   I
Sbjct: 602 APPHGGIAYGLDRLAMLLAGATSIRDVIAFPKTTTAQCALTRTPSEVDPQQLRDLSFSI 660


>gi|297584744|ref|YP_003700524.1| aspartyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297143201|gb|ADH99958.1| aspartyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 594

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/598 (39%), Positives = 350/598 (58%), Gaps = 12/598 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFE 60
           + RTH CG+L     G  V L GWV R R  G +IF+D+RD  G  Q+V N D      E
Sbjct: 2   KQRTHVCGELNEKHTGEQVTLQGWVKRRRDLGELIFVDLRDRSGYVQIVFNGDENRETHE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSE+V+ + G++  R  E +N  I TG+IE++   + IL+ A+ LP  +  E+E 
Sbjct: 62  MAEKIRSEYVIEVTGVITKRDQENVNDKIPTGEIEVNVTDMTILNKAKGLPFMIEDEQEI 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR  +   +  R R    +R  +  E F+E  TPILT S+PEGARD+
Sbjct: 122 NEDTRLKYRYLDLRRTRMADTMQMRYRTTKLIRDILDEEQFMEIETPILTKSTPEGARDY 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++G FYALPQ+PQ +KQLLM SGF+RY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 182 LVPSRVHEGEFYALPQSPQLFKQLLMVSGFERYYQIARCFRDEDLRADRQP-EFTQVDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ ++++L+ ME+++  + +E   G  V   FLR+ Y +A+ R+G+DKPDLR  + + 
Sbjct: 241 ASFMGKENLLSMMESMMVRLVKEL-KGVDVETPFLRLTYHEAMERFGSDKPDLRFGMELK 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAY 358
           +V+E    S F+VF+   +V  G  V  I  KG G +  R   D ++ +A   G  GLA+
Sbjct: 300 DVSEIVKDSSFKVFAS--TVERGDAVKGICVKGIGPDYSRKDLDALSSFAEIYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  +++E+G  A  GP+AK  +    ++I  R +   GD   F+A           + RN
Sbjct: 358 L--KVEENG--ALKGPIAKFFDEAKAQSIIERFEADAGDVLLFVADKRKVAYDVLGNLRN 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
             A+EL + +   F F W+ +FP   ++E+ K+    H+PFT P      L       ++
Sbjct: 414 KFAKELNLFDPEDFNFLWVTEFPLLSYDEDHKRYVAEHHPFTRPVEEDVELLTTAPEQVR 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+  G  R +  ++  + F+ +G S E  + +FG L  AF+ G PPHGG
Sbjct: 474 AEAYDLVLNGYELGGGSQRIYERDLQEKMFTALGFSDEEAKAQFGFLLDAFEYGTPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR+VM+L    N+R+   FP + +   LL  +P  VS  QL EL L+     K
Sbjct: 534 IALGLDRLVMILAERTNLRDTIAFPKTASANCLLTNAPGGVSDAQLDELHLKSTAEKK 591


>gi|71911626|ref|YP_283176.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|71854408|gb|AAZ52431.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 582

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/593 (39%), Positives = 352/593 (59%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+   S     
Sbjct: 3   RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSNVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++G V +R  +  N  + TG +EL    + IL+ A+  P  +  + E  
Sbjct: 63  AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +T     ++F+VFS+  +V       AI  KG     +R   D++ E+A+  G  GLA  
Sbjct: 299 LTVTVKGNDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W     G +A  GPVAK L  + TE +  +L + + D   F+A D L+  +    A RN
Sbjct: 351 -WVKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++
Sbjct: 406 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I
Sbjct: 526 LAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 578


>gi|328952295|ref|YP_004369629.1| aspartyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328452619|gb|AEB08448.1| aspartyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 593

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 349/591 (59%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTHSCG L + D+   V L GWV R R HGG+IF+D+RD  G+TQVV NP+      AK+
Sbjct: 10  RTHSCGGLRLDDLNKEVILMGWVQRRRDHGGLIFVDLRDREGLTQVVFNPEVNDLAHAKA 69

Query: 65  --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-EREYP 121
             +RSE+V+ I G+V++R     N ++ TG+IE++A ++ +L+ +   P  +   + +  
Sbjct: 70  DILRSEFVIAIRGVVIARPEGMANPSLPTGEIEVAASELRLLNTSLTPPYELEDFKLDTS 129

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR +YR+LDLRR  L +N+  R R    +R  +  + FIE  TP+LT S+PEGARD+L
Sbjct: 130 EAIRLRYRYLDLRRPGLMRNLRLRHRAAQVVRNYLNQQGFIEVETPVLTRSTPEGARDYL 189

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR N G F+ALPQ+PQ +KQLLM +G +RY+Q+  CFRDED R+DR P EF Q+DMEM
Sbjct: 190 VPSRTNPGRFFALPQSPQLFKQLLMMAGLERYYQLCRCFRDEDLRADRQP-EFTQIDMEM 248

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ ++DI + +E ++  +F+E   G  V+  F R+ Y + I R+G D+PD R  + +  
Sbjct: 249 SFISEEDIYDVVEGMMAILFKEIL-GREVTLPFPRLTYAECISRFGVDRPDRRFGLELVE 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           VT+    S+FR F+ + +   G  V AI  KG     R   D +  +    G  GLA+I 
Sbjct: 308 VTDLVAGSDFRTFADVAAR--GGVVKAINGKGLARLPRKELDELTGFVGIYGAKGLAWI- 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +L  +G      P+ K        AI  RL  + GD   F+A  P    +     R H+
Sbjct: 365 -KLTPTG---WQSPLTKFFTPEQQAAINDRLQARQGDLLMFVADIPQIVHTALGQLRLHL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++  +I    ++FCW+  FP  E++ EEK+    H+PFT P      L   D  +++A 
Sbjct: 421 GKKEHLILPETYDFCWVTHFPLLEYDAEEKRYVAMHHPFTSPLEQDLPLLQTDPGAVRAR 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H  +V  + F  + IS E  + +FG L  A + G PPHGG+A
Sbjct: 481 AYDLVLNGNEVGGGSIRIHQRQVQEKVFDTLKISPEEAQQKFGFLLEALEYGAPPHGGVA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G DR+VM+L GAK++REV  FP +Q    LL  +PS V V QL ELG+R+
Sbjct: 541 FGFDRLVMILAGAKSIREVIAFPKTQKATCLLTQAPSEVDVAQLLELGIRL 591


>gi|312134504|ref|YP_004001842.1| aspartyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774555|gb|ADQ04042.1| aspartyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 594

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/591 (40%), Positives = 346/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG++ + DVG  V L+GWV   R  GGIIF+D+RD  GI QVV +        + A
Sbjct: 9   RTKYCGEVSLEDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+RSE+ + + G+V  R  ETIN  I TG++E+ A+++ I S +E  P P+       E
Sbjct: 69  DSLRSEYCIGVRGVVEKRPPETINPKIKTGEVEVRAKELRIFSKSETPPFPIEEGINVNE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + +N++ R ++   +R  +    FIE  TP+LT S+PEGARD+LV
Sbjct: 129 AVRLKYRYLDLRRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQ +KQLLM +GFDRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 189 PSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ DD++   E +L+ +F E   G  +     R+ Y +A+ R+G+DKPD R  + + N+
Sbjct: 248 FVDVDDVIEINEKLLQTIFGEML-GIDLKLPLPRLTYKEAMERFGSDKPDTRFGMELVNL 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           T+   + EF+VF+   + N G  V AI AKG     +R   D + E+A++ G  GLA+I 
Sbjct: 307 TDVAKNCEFKVFAD--AANKGGSVRAINAKGCAAIFSRREIDALVEYAKNFGAKGLAWIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D         P+ K L       I  RL  + GD   F A           + R  I
Sbjct: 365 VESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKDEIVFDVLGNIRLEI 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +++ + F   W+ +FP +E++EEE +    H+PFT P          D   +++ 
Sbjct: 420 ARKLNLLDKSKFNLLWVTEFPLFEYSEEEGRYVAKHHPFTSPMDEDIEFLETDPAKVRSK 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H  E+  + F  +G ++E  ++RFG L  AF+ G PPHGGIA
Sbjct: 480 AYDIVLNGTEIGGGSIRIHSPEIQKRMFKALGFTEEKAQDRFGFLLEAFKFGTPPHGGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G DR+ MLLLG  ++R+   FP  ++    L  +PS V  +QLREL +++
Sbjct: 540 YGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590


>gi|123969430|ref|YP_001010288.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|166225376|sp|A2BTS0|SYD_PROMS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123199540|gb|ABM71181.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 598

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/602 (38%), Positives = 358/602 (59%), Gaps = 22/602 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R   C +L  +D+G  V L GWV R R HGG+IF+D+RDH G  Q+  NPD     F+ A
Sbjct: 2   RNKICEELNNTDIGKLVNLCGWVDRRRDHGGVIFIDLRDHSGFLQITINPDDGADLFKQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119
           +++R+E V+ + G++  R  ++IN N+ TG++EL  + ++IL+ +   LP PV       
Sbjct: 62  ETLRNETVIMVSGIINERPKDSINTNLSTGELELKVKDLQILNQIKNNLPFPVSIHDYEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLRR  L +N+ KR +II   R  +    F E  TP+LT S+PEGARD
Sbjct: 122 TKEELRLKYRYLDLRRGKLLENLKKRHKIIKVAREFLDNFGFTEVETPLLTKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP+R++ G F+ALPQ+PQ +KQLLM  G D+Y+QIA CFRDED R+DR P EF QLD+
Sbjct: 182 FLVPARLSNGEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ +++I++  E++++ +++E  N N  +N F R+ +  A+  YGTD+PD R  +++
Sbjct: 241 EMSFISEEEIISFNESLIKKIWKEVLNIN-FNNAFPRMTWQAAMDNYGTDRPDTRYQMLL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-----DRMNEWARSQGQP 354
            ++     +  F +F+K  ++  G  + +I  KGG  + +         + + A+  G  
Sbjct: 300 KDLGGVLGNIGFNIFTK--AIKSGGYIKSITVKGGNSSISNVRIKPGGDIFKVAQDAGAG 357

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GLA+I  + DE   +  +G +  +L+  +   I    + +DGD     AGD         
Sbjct: 358 GLAFIRVKGDE---LETIGAIKNNLSEEHIADILKITEAKDGDLILLGAGDKQIVNQSLD 414

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG----GMESLK 470
             R +IA+EL +I+ + + F W+ DFP +E NE+E + +  H+PF  P+       E+LK
Sbjct: 415 RVRQYIAKELNLIDKSKWNFLWVTDFPMFERNEDENRYEALHHPFCSPKNIKSKDSENLK 474

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             ++ S  A  YDLV NG E+  G +R H + +  Q    VG++ + ++ +FG L  A +
Sbjct: 475 -KEIESSTANAYDLVLNGLELGGGSLRIHEANLQRQVLKTVGLTDKEIDEKFGFLIEALE 533

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DRI ML++GA ++RE   FP +Q    LL  +PS VS  QL+EL + 
Sbjct: 534 MGAPPHGGIAFGLDRITMLIIGADSIRETIAFPKNQQAKCLLTNAPSNVSESQLKELDIE 593

Query: 591 IV 592
           I 
Sbjct: 594 IT 595


>gi|260583854|ref|ZP_05851602.1| aspartate--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158480|gb|EEW93548.1| aspartate--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 585

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/594 (39%), Positives = 355/594 (59%), Gaps = 16/594 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
           + R+  CG +    VG  + L GWV + R HGG+IF+D+RD  G+ QVV NP  + A FE
Sbjct: 2   KKRSIYCGLVTEELVGKEITLHGWVQKRRDHGGVIFIDLRDREGVMQVVFNPQHNQAAFE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA ++R E+V+ + G V  R     N N+ TG +EL   ++E+LS A+  P+ +  ++  
Sbjct: 62  IADTLRPEYVIEVTGTVALRGEGLTNPNLKTGTMELEVHQVELLSKAKTPPIYIEDDKVA 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LD+RR  + +N+  R +   ++R  +  E FI+  TP L  S+PEGARD+
Sbjct: 122 SDELRMKYRYLDMRRKPVLENLRLRHKTTRAIREYLDTEGFIDVETPYLAKSTPEGARDY 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++GSFYALPQ+PQ +KQLLM  G DRY+QI  CFRDED R DR P EF Q+D+E
Sbjct: 182 LVPSRVHEGSFYALPQSPQTFKQLLMGGGLDRYYQIVRCFRDEDLRGDRQP-EFTQVDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  ++I   ME +L+ V ++ + G  V+  F R+ + +A+ RYG DKPD R  + + 
Sbjct: 241 TSFLSAEEIQEMMEGLLKKVMKD-TLGVEVTTPFPRLSFAEAMSRYGNDKPDTRFALELI 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V +    S+ +VFS +  V  G  V A+  KG     +R   D + ++    G  GLA+
Sbjct: 300 DVADIVKDSDLKVFSTV--VENGGHVKALNLKGLADEYSRKDADSLAQFVAKYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTE-AIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +  +++E G     GP+AK L  VN E A+R RLD + GD  FF A  P       ++ R
Sbjct: 358 L--KVEEDGL---KGPIAKFL--VNQETALRERLDAEVGDIIFFCADKPSVVAQSLSELR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            H  ++  +I+ + F F W++D+P  E++E+  +    H+PFT P     +    D  + 
Sbjct: 411 LHFGRKHELIDQSKFNFLWVVDWPLLEYDEDANRYVAMHHPFTRPVNEDFNALLEDPAAA 470

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA  YD+V NG+E+  G +R +  ++    F+ +G +KE  + +FG L  A   G PPHG
Sbjct: 471 KAQAYDIVLNGYELGGGSLRIYRRDMQEAMFNVLGFTKESAQEQFGFLMDALDYGFPPHG 530

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DR+VMLL G  N+REV  FP + +  D +  +PS VS +QL+EL L+I
Sbjct: 531 GIALGLDRLVMLLAGEDNIREVIAFPKNGSAMDTMTQAPSPVSEQQLQELSLKI 584


>gi|302336148|ref|YP_003801355.1| aspartyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319988|gb|ADK68475.1| aspartyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 589

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/595 (39%), Positives = 339/595 (56%), Gaps = 13/595 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---C 58
           H   TH+CG+L   D+G  V L+GWV   R HGG+IF+D+RD  G+TQV  +P+ +    
Sbjct: 4   HSMHTHTCGELRREDIGREVALTGWVWHRRDHGGLIFVDLRDRAGVTQVSFDPEHSGGIA 63

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F  A+++RSEW + + G V  R     N  + TGQIE+   +IE+L+ A      +    
Sbjct: 64  FHTAETIRSEWPIKVVGTVRERPEGQANEKLATGQIEVLVSEIEVLNTARTPAFQIEDHV 123

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E +R +YR+LD+RR  +  N+  R+    ++R  +    F+E  TP L  S+PEGAR
Sbjct: 124 DAAEDVRLRYRYLDIRRPKMMANLRLRSDFTFAIRQALHDRAFMEVETPALFKSTPEGAR 183

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR   G FYALPQ+PQ  KQLLM  G +RY+Q+A CFRDED R+DR P EF Q+D
Sbjct: 184 DFLVPSRTQPGHFYALPQSPQLLKQLLMVGGVERYYQVAKCFRDEDLRADRQP-EFTQVD 242

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVEQDD++  +E+VL   F +   G  +     R+ Y +A+  YGTDKPD R  + 
Sbjct: 243 VEMSFVEQDDVMAALEDVLAEAFSKV--GVQMQLPLRRLPYWEAMDTYGTDKPDTRFGME 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           +H+VT+    S         + +P   V AI AKG G   RA  D++ + A + G  GLA
Sbjct: 301 LHDVTQ-IFSSSKFKLFSSAATDPKTYVKAINAKGAGKWPRAQIDKLADVASAFGARGLA 359

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI +R  E G+V    P+ K  +     A+R  +D++ GD   F     L         R
Sbjct: 360 YIAFR--EDGSVT--SPIVKFFSDEEMAALRAEMDVEPGDLVMFAVEGRLAADEILGGMR 415

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +H+A  LG++     +F W++DFP + W+E+       H PFT P      L   D LS+
Sbjct: 416 SHMADALGLVR-EGHDFLWVVDFPLFHWDEDRGAYAAEHQPFTQPMEADVELLDADPLSV 474

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD V +GFE   GG+R H +++ ++    +G ++E    +FG L  A + G PP G
Sbjct: 475 GSHTYDFVMDGFEAGGGGMRIHDADLQMRILEKLGFTEERAREQFGFLMEALKFGAPPMG 534

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G A G+DR+ MLL G+ ++REV  FP + +  DL+  +P  VS  QL+E+ LR++
Sbjct: 535 GFALGLDRVCMLLAGSDSIREVMAFPKTSSGSDLMSDAPGEVSGRQLKEVSLRLL 589


>gi|268679293|ref|YP_003303724.1| aspartyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617324|gb|ACZ11689.1| aspartyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 582

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/598 (39%), Positives = 353/598 (59%), Gaps = 23/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H C DL V+++G  V + GW +  R HGG+IF+D+RD  G+ Q+V +P+  +   EIA
Sbjct: 2   RSHYCTDLDVANIGEIVEVCGWANSHRDHGGVIFIDLRDKSGLVQLVCDPEDSTKAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+R E+VL   G V +R     N  + TG+IE+   ++ + + +E +P  V G+    E
Sbjct: 62  SSIRDEFVLKAKGRVRARGEGLENPRLKTGKIEIVVDELIVENASETVPF-VIGDNNVGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR    ++    R++   ++R  + A+ F+E  TPILT S+PEGARD+LV
Sbjct: 121 DVRLKYRYLDLRNAKAYEIFKLRSKATVAVRNSLDAQGFLEVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRYFQ+A CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHNGEFYALPQSPQLFKQLLMCAGFDRYFQVAKCFRDEDLRADRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+D++   EN+LR VF+  + G  +S  F RI + +A+ +YG+DKPDLR  + M +V
Sbjct: 240 FCNQEDVMKVTENLLRDVFK--ACGYEISIPFNRIRFKEAMEKYGSDKPDLRYDLSMIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGLAY 358
            + F + +  +FS I        + A+  K   G+  F  R      E+ R  G  GL Y
Sbjct: 298 IDIFANCKNEIFSNIAKDTKKNRIKAL--KVPNGDNIFSKRQMQSFEEYVRKFGAQGLGY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
             +++ E G     GP+ K     + + I    D+  GD+ FF AG+      +    R 
Sbjct: 356 --FQMKEDGL---KGPLTKFFEESDLQKIVDAADLHVGDAIFFGAGEKKVVLDYMGRFRI 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+++ II  + FEF W++DF  +E   E  K+   H+PFTMP+     +    +  ++
Sbjct: 411 FLAEQMNIIPKDVFEFVWVVDFEMFEV--ENGKVKALHHPFTMPK----DIDNTPIDEME 464

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H  E+  + F  +GI  E    +F  L  A + G PPHGG
Sbjct: 465 SIAYDIVLNGVELGGGSIRIHKKEIQQKVFKLLGIDDEEAHEKFEFLLDALKYGAPPHGG 524

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G+DR++ML+  ++++R+V  FP +Q    LL  +PS V  +QLR+LG+R+ E  K
Sbjct: 525 LAIGLDRMMMLITKSESIRDVIAFPKTQKAQCLLTRAPSEVESDQLRDLGIRLREKSK 582


>gi|148381005|ref|YP_001255546.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153931829|ref|YP_001385376.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153936865|ref|YP_001388783.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|166225338|sp|A7FY03|SYD_CLOB1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225339|sp|A5I6D5|SYD_CLOBH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148290489|emb|CAL84617.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152927873|gb|ABS33373.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152932779|gb|ABS38278.1| aspartate--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 593

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/595 (41%), Positives = 359/595 (60%), Gaps = 18/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+   +++G  V + GWV R R  GG+IF+D+RD  GI Q+V   +     FE +
Sbjct: 10  RTIMCGESRENNIGQKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEKS 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +V+SE+ + + G ++ R  ++ N ++ TG +EL  + I+ILS +E  P+ +    +  E
Sbjct: 70  DNVKSEYCIAVTGEIVKR--QSPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDASE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR  + K  + R +    +R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 128 NIRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE+DD++   E +L  VF+E   G  V     R+ Y  A+ +YG+DKPDLR  + ++++
Sbjct: 247 FVEEDDVIELNERLLAKVFKEVG-GIDVKLPIERMPYKIAMEKYGSDKPDLRFGMEINDL 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           TE   +SEF+VF    ++  G  V AI A+      R   D++ ++ ++    GLA+I +
Sbjct: 306 TEAVKNSEFKVFKG--AIEAGGSVRAIKAENCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           + DE  +     P+AK L     +AI  ++D + GD    +A  + + F S  A  R HI
Sbjct: 364 KEDEIKS-----PIAKFLTEEEMKAILEKMDAKAGDLILIVADKNNVVFESLGA-LRLHI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL IIN N F F WI +FP   +NEEE +    H+PFT        L G +   ++A 
Sbjct: 418 AKELDIINKNEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIELLGTEPGKVRAK 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H S+   + FS +G +KE    RFG L  AF+ G PPHGG+A
Sbjct: 478 AYDIVLNGEELGGGSIRIHDSKFQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGLA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR++M L G +N+++V  FP +QN FC  L  +P+ V   QL ELG++ +E 
Sbjct: 538 YGLDRMIMFLAGTENIKDVITFPKNQNAFCP-LTEAPNVVDENQLEELGIKKIEK 591


>gi|224824723|ref|ZP_03697830.1| aspartyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603216|gb|EEG09392.1| aspartyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 600

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/597 (39%), Positives = 354/597 (59%), Gaps = 16/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +  + +G  V + GWVHR R HGG+IF+D+RD  G+ QVV +PD+   F+ A 
Sbjct: 2   RTNYCGLIDKAYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGLVQVVIDPDTPEAFKTAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G+V  R A T NA++++G+IE+ A+ IEIL+ A   P  +  E    E+
Sbjct: 62  SARNEFVLSISGIVRERPAGTANAHLVSGEIEILAKDIEILNTAATPPFQIDDE-NLSEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R  +R +DLRR  + KN+  R R+   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTHRVIDLRRPAMQKNLRLRYRVAMGVRQYLDQQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++D I++  E++ R +F +  +      +F R+ Y DA+  YG+DKPDLR  +    +T
Sbjct: 240 LDEDQIMDITEDMARQIFRDVMDVEL--GDFPRMSYADAMHYYGSDKPDLRVSLQFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF-- 360
           +     EF+VF     + P   V A+   GG   +R   D   ++    G  GLAYI   
Sbjct: 298 DLMKTEEFKVFRGAADL-PNGRVVALRVPGGAALSRKEIDDYTQFVGIYGAKGLAYIKVN 356

Query: 361 --WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
              ++    N     P+ K L++     I  R    +GD  FF A D  K  + A  A R
Sbjct: 357 DKSKISNDENSGLQSPIVKFLSVNALNEIMARTAADNGDIIFFGA-DKAKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             I  E G+        +   W++DFP +E++E++ +    H+PFT P+ G E L  ++ 
Sbjct: 416 IKIGHERGLAGGYFVKEWRPLWVVDFPMFEYDEDDDRWTACHHPFTSPKPGHEDLMDSNP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G +R H +E+  + F+ + I+ E  +N+FG L    + G P
Sbjct: 476 GACLARAYDMVLNGWEIGGGSVRIHRAEIQEKVFAALKITPEEQQNKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P  V  +QLREL LR+
Sbjct: 536 PHGGLAFGLDRLVTLMAGAESIRDVIAFPKTQRAQCLLTNAPGAVDEKQLRELNLRL 592


>gi|218132937|ref|ZP_03461741.1| hypothetical protein BACPEC_00798 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991810|gb|EEC57814.1| hypothetical protein BACPEC_00798 [Bacteroides pectinophilus ATCC
           43243]
          Length = 612

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/592 (39%), Positives = 351/592 (59%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RT+ C ++G +D+G  V + GWV + R  G +IF+D+RD  G+ Q++    N  +  FE 
Sbjct: 23  RTNRCAEVGTADIGREVTVMGWVQKRRNLGSLIFVDLRDRSGLLQILFDENNIGTEGFEK 82

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+RSE+V+ + G +  RS   +N N+ TG IE+ A  + ILS A+  P P+  +    
Sbjct: 83  ASSLRSEYVIAVTGKIAKRSG-AVNENLKTGDIEVIATDLRILSEAQTPPFPIEADSNTK 141

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  +  NI+ R+R+    R  +  E F+E  TP+L  S+PEGARD+L
Sbjct: 142 EDLRLKYRYLDLRRPDIQANIMMRSRVATLTRAFLANEGFLEIETPMLCKSTPEGARDYL 201

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ YKQLLM SG+DRY QIA CFRDED R+DR P EF Q+DME+
Sbjct: 202 VPSRVHPGHFYALPQSPQLYKQLLMCSGYDRYMQIARCFRDEDLRADRQP-EFTQIDMEL 260

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L  +F+E  N + V     R+ + +A+ R+G+DKPDLR  + +H+
Sbjct: 261 SFVDIDDVIDVNERLLAYLFKEVLNVD-VQLPIQRMTWQEAMDRFGSDKPDLRFGMELHD 319

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V++      F VF+   ++  G  V  I AKG G   R   D + ++A+  G  GLAYI 
Sbjct: 320 VSDVVKGCGFGVFTG--AIENGGSVRGINAKGQGAMPRKKIDALVDFAKGYGAKGLAYI- 376

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             ++E G        AK +     +A+   ++ + GD   F A       +     R  +
Sbjct: 377 -AINEDGTYK--SSFAKFMTDDEMKALVTAMEGEPGDLLLFAADRNKIVWNVLGALRIEL 433

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ++G+++ N ++F W+ +FP +EW++EE +    H+PFTMP          DL +++A 
Sbjct: 434 AGQMGLLDKNEYKFLWVTEFPQFEWSDEENRYVAMHHPFTMPMEEDLDKLDTDLGAVRAK 493

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H  +V  + F  +G + E    +FG L  AF+ G+PPH G+A
Sbjct: 494 AYDIVLNGTEIGGGSVRIHQEDVQERMFRALGFTNEEAHEKFGFLLDAFKYGVPPHAGLA 553

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VML+    ++R+V  FP  ++   L+  +P TV  +QL EL L I 
Sbjct: 554 YGLDRLVMLMAKCDSIRDVIAFPKVKDASCLMTEAPGTVDAKQLEELSLDIA 605


>gi|225386911|ref|ZP_03756675.1| hypothetical protein CLOSTASPAR_00659 [Clostridium asparagiforme
           DSM 15981]
 gi|225046923|gb|EEG57169.1| hypothetical protein CLOSTASPAR_00659 [Clostridium asparagiforme
           DSM 15981]
          Length = 597

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/598 (39%), Positives = 358/598 (59%), Gaps = 15/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FE 60
           R+H C ++  +++G  V + GWV + R  GGIIF+D+RD  GI Q++   +S C    F 
Sbjct: 10  RSHRCTEVTTANIGQDVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFE-ESDCGAENFA 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ + G V +RS   +N N+ TG IE+ A+ + +LS +E  P P+    + 
Sbjct: 69  KAEKLRSEFVIAVTGRVEARSG-AVNQNLATGAIEVRAKSMRVLSESETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR  L +N++ R+R+    R  +  E F+E  TP L  S+PEGARD+
Sbjct: 128 KEELRLKYRFLDLRRPDLQRNMMVRSRVATLTRAFLADEGFLEIETPTLIKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ D++L+  E +L+ +F+E  + + +     R+ + +A+ R+G+DKPDLR  + + 
Sbjct: 247 LSFVDVDEVLDVNERLLQKLFKEICDYD-LPLPLPRMTWQEAMDRFGSDKPDLRFGMELQ 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           NV+E     EF VF   L    G  V  I A+G G   R   D + E+A+  G  GLAY+
Sbjct: 306 NVSEVVKGCEFAVFKNAL--ESGGSVRGINAEGQGHMPRKKIDALVEYAKGFGAKGLAYV 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              ++E G++      AK +      A+   +  + GD   F A           + R  
Sbjct: 364 --AINEDGSLK--SSFAKFMTEEEMGALVAAMGGKPGDLLLFAADRNKVVYDVLGNLRLE 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A++L ++  + F+F W+ +FP  E++EEE +    H+PFTMP         +D   ++A
Sbjct: 420 LARQLDLLKKDDFKFLWVTEFPLLEYSEEEGRFMAMHHPFTMPMDEDLQYIDSDPGRVRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G +R H  +V  + F  +G + E   ++FG L  AF+ G+PPH G+
Sbjct: 480 KAYDIVLNGVEMGGGSVRIHQGDVQSKMFEVLGFTPERANDQFGFLLEAFKYGVPPHAGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G DR+VML++GA ++R+V  FP  ++   L+  +P+ V   QL+ELG+ + E  ++
Sbjct: 540 AYGFDRMVMLMVGADSIRDVIAFPKVKDASCLMTEAPTPVDPAQLKELGIEVAETEEE 597


>gi|308234074|ref|ZP_07664811.1| aspartyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943897|ref|ZP_08241362.1| aspartate--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491866|gb|EGF23640.1| aspartate--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 593

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/597 (39%), Positives = 338/597 (56%), Gaps = 14/597 (2%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIA 62
           TH+CG+L   DVGS V L+GWV   R  GG+IF+D+RD  G TQ+  +P   D   F  A
Sbjct: 7   THTCGELRAHDVGSTVTLTGWVWHRRNLGGLIFIDLRDRSGYTQIACDPNFKDGVAFNTA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +R EW + + G V  R     N ++ TG++E+    IE+L+ ++  P  +  + +  E
Sbjct: 67  QDIRPEWPVLVSGTVRLRPEGQANTSMPTGEVEVLVDTIEVLNTSQTPPFQIEDKIDLSE 126

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +   YR+LD+RR  +  N+  R+   +++R      +FIE  TP L  S+PEGARDFLV
Sbjct: 127 DMSLTYRYLDIRRPRVLNNLKLRSNFAHALRQAFHEHDFIEVETPALFKSTPEGARDFLV 186

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ  K+LLM  G +RY+QI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 187 PSRVRAGHFYALPQSPQLLKELLMVGGVERYYQIVKCFRDEDFRADRQP-EFTQVDVEMS 245

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV Q++IL+  E +L   F +   G     +  R+ Y DA+  YG DKPD R  + MHNV
Sbjct: 246 FVTQENILDMAEAILSKAFTQV--GVKFPQHLERMQYWDAMDTYGCDKPDTRFGMKMHNV 303

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+   HS F+VFS+  +   G  V  + AK  G   R+  D++ + A+  G  GL +I  
Sbjct: 304 TKLVEHSAFKVFSQ--AAQHGQRVVGMCAKTAGNWGRSRIDKLADVAKKNGAAGLVWI-- 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            L + G++    P+AK L      A+   ++ Q GD   FI    L         R H+A
Sbjct: 360 ALHDDGSIK--SPIAKFLQEDEIHALCAEMEAQPGDLLLFIVDKRLVADQAMGALRLHLA 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            EL I  C    F W+++FP + W+ E       H PFT+P+         D LS+ ++ 
Sbjct: 418 DELSIKRCG-HSFLWVVNFPLFHWDPERNAYASEHQPFTLPRAEDMDKLSVDPLSVGSYT 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD V +G+E   GG+R H +E+ ++    +G ++     +FG L  A   G PP GG A 
Sbjct: 477 YDFVMDGYEAGGGGMRIHDAELQMRILKMLGFTEARARAQFGFLLDALTFGAPPMGGFAL 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           G+DRI MLL GA ++R+V  FP S +  DL+  +PS VS +QL +L LR+VE+ K+I
Sbjct: 537 GLDRICMLLAGADSIRDVIAFPKSTSASDLMSAAPSVVSAQQLSDLHLRVVEDDKQI 593


>gi|146283147|ref|YP_001173300.1| aspartyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|145571352|gb|ABP80458.1| aspartyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 604

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/595 (40%), Positives = 352/595 (59%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLD+RD  G+ QVV +PD A  F  A 
Sbjct: 16  RSHYCGQLNESLDGQEITLCGWVHRRRDHGGVIFLDVRDREGLAQVVFDPDRAETFAAAD 75

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V  R A  +N NI +G IE+   ++E+L+ AE  P P+    +  E 
Sbjct: 76  RVRSEYVIKVTGKVRLRPAGAVNPNIASGAIEVLGYELEVLNDAETPPFPLNEYSDVGEE 135

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPIL   +PEGARD+LVP
Sbjct: 136 TRLRYRFIDLRRPEMAEKLKLRSRITASIRRYLDENGFLDVETPILGRPTPEGARDYLVP 195

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 196 SRTHAGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 254

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI+   E ++R +F+E    +     F  + +++A+RRYG+DKPDLR P+ + +V 
Sbjct: 255 LDEADIIGITEGMIRKLFKEVL--DLEFGEFPHMPFEEAMRRYGSDKPDLRIPLELVDVA 312

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   G     R+  D   ++    G  GLAYI   
Sbjct: 313 DQLNAVEFKVFSGPAN-DPKGRVAALRVPGAASMPRSQIDDYTKFVGIYGAKGLAYIKVN 371

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K +   N   I  R+   DGD  FF A D  K  S A  A R  + 
Sbjct: 372 ERAKGVEGLQSPIVKFIPEDNLNVILDRVGAVDGDIVFFGA-DKAKIVSEALGALRIKLG 430

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L ++ C+ +   W++DFP +E N ++  +   H+PFT P+   + L+ N   ++ +  
Sbjct: 431 HDLKLLTCD-WAPLWVVDFPMFEGN-DDGSLSALHHPFTAPKCTPQELEANPSAAL-SRA 487

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F  +GI +   E +FG L  A + G PPHGG+A 
Sbjct: 488 YDMVLNGTELGGGSIRIHRKEMQQAVFRILGIDEAEQEEKFGFLLDALKFGAPPHGGLAF 547

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LR+L +R+ E PK
Sbjct: 548 GLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGAVDNKALRDLHIRLREQPK 602


>gi|27468229|ref|NP_764866.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57867125|ref|YP_188768.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|293366414|ref|ZP_06613092.1| aspartate-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258359|sp|Q8CS99|SYD_STAES RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62287515|sp|Q5HNS2|SYD_STAEQ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|27315775|gb|AAO04910.1|AE016748_144 aspartyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57637783|gb|AAW54571.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|291319448|gb|EFE59816.1| aspartate-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329735236|gb|EGG71528.1| aspartate--tRNA ligase [Staphylococcus epidermidis VCU045]
 gi|329737268|gb|EGG73522.1| aspartate--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 588

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/592 (41%), Positives = 354/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD      ++A
Sbjct: 4   RTTYCGLVTEEFLNEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALQVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ ++G+V  R AETIN  I TGQ+E+    IEI++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVEGVVTKRDAETINPKIKTGQVEVQVSNIEIINKSETPPFSINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+DI+   E++LR V ++   G  VS  F R+ Y +A+ R+G+DKPD R  + + N
Sbjct: 243 SFVDQEDIIAMGEDMLRKVVKDVK-GIDVSGPFPRMTYAEAMDRFGSDKPDTRFGMELIN 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++      F+VF    +V+   E+ AI AK       R   D + E+    G  GLA++
Sbjct: 302 VSQLGKEMNFKVFKD--TVDNNGEIKAIVAKDAANKYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ + G     GP+A+    VN E ++   + + GD   F+A  P          R  
Sbjct: 360 --KVVDDG---LSGPIARFFEDVNVETLKQLTEAKPGDLVMFVADKPNVVAQSLGALRIK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+ +   F W+ D+P  E++E+ K+   AH+PFT P+         +  +++A
Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEPENVQA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G + E  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFTNEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL+EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLQELSLRI 586


>gi|15645242|ref|NP_207412.1| aspartyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|3024680|sp|P56459|SYD_HELPY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2313739|gb|AAD07682.1| aspartyl-tRNA synthetase (aspS) [Helicobacter pylori 26695]
          Length = 577

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 227/589 (38%), Positives = 348/589 (59%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  V+++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKIVKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G V  R A   N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKVRLRGAGLENPKLKTGKIEIVLEELIIENKSATPPIEI-GNKHVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+  + G+T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQEIFK--AVGHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F  S   +FS          + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFRDSSNAIFSNTAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            DE       GP+ K L+    + I  R D Q GD  FF AGD      +    R  +A+
Sbjct: 358 EDEI-----KGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+    +++  D+  ++A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECEDIEEVEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSHSIRDVIAFPKTQKASCLLTNAPSPINEEQLRELHIRL 575


>gi|296126518|ref|YP_003633770.1| aspartyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296018334|gb|ADG71571.1| aspartyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 587

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/595 (40%), Positives = 353/595 (59%), Gaps = 13/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           R+++   G L  +D+G  V+L+GWV R R HGG+IF+D+RD  G  Q+V NP+       
Sbjct: 2   RFKSAYNGILSKNDIGKEVKLAGWVLRRRDHGGVIFVDLRDRTGFVQIVFNPEISKEAHN 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ ++G V +RS E IN  I TG+IE+  +K+E+L+ +E  P  +  + + 
Sbjct: 62  DAQDLRSEYVISVEGKVRARSEEMINPKIPTGEIEVMVEKMELLNTSETPPFLLEDDIDT 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LDLRR  +  N+ KR +I N+ R  +    FI+  TPIL  S+PEGARDF
Sbjct: 122 GEDIRLKYRYLDLRRPKVFNNLYKRFQITNAFRKHLADNGFIDVETPILNKSTPEGARDF 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQ+PQ +KQ+LM  GFDRY+Q+A CFRDED R+DR P EF Q+D+E
Sbjct: 182 LVPSRLNAGDFYALPQSPQIFKQILMIGGFDRYYQVAKCFRDEDLRADRQP-EFTQVDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  D+ L+ ME+V   + ++   G  +   F R+ Y DA+  YG+DKPD R  + + 
Sbjct: 241 TSFLNTDEFLSIMESVTANIVKDVY-GIDLPTPFPRLNYYDAMEMYGSDKPDTRFELKLI 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           NV E     +F VF   L  +  + +  + AKGG    +R   D   ++    G  GLA+
Sbjct: 300 NVEEAVRGCDFAVFKNAL--DNKFIIRCLNAKGGVDKLSRKDIDDFTKYVGIFGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  R+ E+G  +    + K  +  N + I      + GD  FF+A  P        + R 
Sbjct: 358 M--RVTENGLESN---IVKFFSEDNQKKILEVTKAEKGDLLFFVADTPKVTYDALGNLRL 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++L +I+ +   F W+++FP +E++ +EK+I   H+PFT P      L   D+L ++
Sbjct: 413 KVGEKLNLIDKDKLNFLWVVEFPLFEYDHKEKRISATHHPFTAPVPEDVPLLDTDVLKVR 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG EI  GG R + S+V  + FS +GI  E  + RFG L  A + G PP  G
Sbjct: 473 SDTYDLVLNGNEIGGGGQRIYDSKVQAKIFSLLGIDDEKAKIRFGFLLDALKYGAPPMCG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +A GIDR++MLL    ++REV  FP +Q    L+ G PSTV  +QL EL L++ E
Sbjct: 533 MAFGIDRVIMLLQKQDSIREVIAFPKTQKGQCLMSGCPSTVDDDQLEELHLKVEE 587


>gi|313203172|ref|YP_004041829.1| aspartyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312442488|gb|ADQ78844.1| aspartyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 590

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/598 (40%), Positives = 347/598 (58%), Gaps = 19/598 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           +RTH+CG+L +++VG    LSGWV R R  GG+ F+DIRD YGITQ+V N D  +A F+ 
Sbjct: 2   FRTHTCGELRLTNVGQQTTLSGWVQRARKMGGMTFVDIRDRYGITQLVFNQDVNAALFDT 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  RS +  NANI TG++E+   ++ IL+ ++  P  +    +  
Sbjct: 62  ANKLGREYVIRVSGEVAERSNK--NANIPTGEVEILVSELSILNESKTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR+ + +N+  R RI   +R  +   NF+E  TPIL  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRNNVRENLELRHRITFELRRYLDQMNFLEVETPILIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGEFYALPQSPQLFKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D+LN  E +++ +F +F      +  F R+ ++D ++ YG+DKPD+R  +    
Sbjct: 239 SFVEQEDVLNLFEGMMKHLF-KFVKNIDFTEAFPRMTWEDGMKYYGSDKPDIRFEMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLAY 358
           + E     +F VF  +  V        I A G  G  R   D + ++ +    G  GL Y
Sbjct: 298 LKEAVSGHDFVVFDSVPYVG------GICATGCAGYTRKQLDELTDFVKRPQIGAKGLVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  R +  G       V K  +  + + I      Q GD    +AG+  K      + R 
Sbjct: 352 I--RCEADGTFK--SSVDKFYSADDLKQIASLFKAQPGDLILILAGEKRKTQKALCELRL 407

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +   LG  N + +   WI+DFP +EW+E+ ++    H+PFT P      L   D  +++
Sbjct: 408 EMGARLGYRNKDVYAPLWIIDFPLFEWDEDTQRFYATHHPFTSPNLDDIPLLETDPGAVR 467

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G IR H S +  Q F ++G + E  E +FG L  AFQ G PPHGG
Sbjct: 468 ATAYDMVINGVELGGGSIRIHDSALQHQMFKHLGFTPEQAEAQFGFLMSAFQYGAPPHGG 527

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G+DR+V L  G  ++R+   FP + +  D++  SPST++  QL EL L +   P+
Sbjct: 528 LAFGLDRLVSLFAGLDSIRDCIAFPKNNSGRDVMADSPSTIAQAQLDELNLVVDLKPQ 585


>gi|298529647|ref|ZP_07017050.1| aspartyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511083|gb|EFI34986.1| aspartyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 603

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/596 (39%), Positives = 347/596 (58%), Gaps = 16/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H C DL +      V L GWV   R HGG+IF+D+RD  G+TQVV  PD  +   E A
Sbjct: 18  RSHGCNDLTLEHDDREVCLMGWVQYRRDHGGLIFIDLRDRDGLTQVVFTPDVSAQALEDA 77

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++RSE+VL + G+V  R  + IN N+ TG IE++ ++ ++L+ +   P  +    E  E
Sbjct: 78  HALRSEYVLAVKGVVRRRPEDMINPNLYTGDIEVAVREFKLLNRSRTPPFLIEDRAEAAE 137

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R K+R+LDLRR  +  N+  R+++++ +R  + +  F E  TP+LT S+PEGARDFLV
Sbjct: 138 NLRLKHRYLDLRRPAVAGNLRLRSQVVHEIRNFLHSSGFTEVETPVLTRSTPEGARDFLV 197

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++QG FYALPQ+PQ +KQLLM +G DRY+Q+  CFRDED R+DR P EF Q+DMEMS
Sbjct: 198 PSRLSQGHFYALPQSPQLFKQLLMCAGMDRYYQVVKCFRDEDLRADRQP-EFTQVDMEMS 256

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE++ +++  EN++  +F+E  +   +   F R+ Y  AI  YG D+PD+R  + + +V
Sbjct: 257 FVEEEGVMSESENMIARLFKEVLDVE-LETPFQRLDYSRAIADYGLDRPDVRFDLTLKDV 315

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+    S F +F++   V       A+   GG   +R   D   ++    G  GLA+I  
Sbjct: 316 TDVVRGSGFNLFARAELVK------ALRVPGGAELSRREIDEYTDFVGIYGAKGLAWIKI 369

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE        P+AK L+      +   L ++ GD  FF A  P    +     R  + 
Sbjct: 370 KEDE-----WQSPIAKFLSREECSGLTEALGLEAGDIVFFQAASPEVVNNSLGYLRLKLG 424

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +  G+I  + F   WIMDFP  EW+ EEK+    H+PFT P+ G   L   +     A  
Sbjct: 425 ERFGLIPRDTFAPIWIMDFPLLEWDGEEKRWMARHHPFTSPKDGHMDLLEKEPGQALARA 484

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E   + F  +G+  E   N+FG L +A   G PPHGGIA 
Sbjct: 485 YDMVINGQEVGGGSIRLHTREDQERMFKALGMDLEESRNKFGFLLQALDYGAPPHGGIAF 544

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VML+ G  ++R+V  FP +Q    L+  +P+ VS  QLRELG+R+ E  KK
Sbjct: 545 GLDRLVMLMAGCSSIRDVIAFPKTQKASCLMTEAPAAVSNRQLRELGIRLREAEKK 600


>gi|251811034|ref|ZP_04825507.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875946|ref|ZP_06284813.1| aspartate--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|251805452|gb|EES58109.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281294971|gb|EFA87498.1| aspartate--tRNA ligase [Staphylococcus epidermidis SK135]
          Length = 588

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/592 (41%), Positives = 354/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD      ++A
Sbjct: 4   RTTYCGLVTEEFLNEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALQVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ ++G+V  R AETIN  I TGQ+E+    IEI++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVEGVVTKRDAETINPKIKTGQVEVQVSNIEIINKSETPPFSINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+DI+   E++LR V ++   G  VS  F R+ Y +A+ R+G+DKPD R  + + N
Sbjct: 243 SFVDQEDIIAMGEDMLRKVVKDVK-GIDVSGPFPRMTYAEAMDRFGSDKPDTRFGMELIN 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++      F+VF    +V+   E+ AI AK       R   D + E+    G  GLA++
Sbjct: 302 VSQLGKEMNFKVFKD--TVDNNGEIKAIIAKDAANKYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ + G     GP+A+    VN E ++   + + GD   F+A  P          R  
Sbjct: 360 --KVVDDG---LSGPIARFFEDVNVETLKQLTEAKPGDLVMFVADKPNVVAQSLGALRIK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+ +   F W+ D+P  E++E+ K+   AH+PFT P+         +  +++A
Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEPENVQA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G + E  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFTNEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL+EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLQELSLRI 586


>gi|117924249|ref|YP_864866.1| aspartyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|166225354|sp|A0L667|SYD_MAGSM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|117608005|gb|ABK43460.1| aspartyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 607

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/611 (40%), Positives = 353/611 (57%), Gaps = 28/611 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH C D+  S +G  V L GW++R R HGG+IF+D+RD  G+ QVV +P+  +     A
Sbjct: 3   RTHYCNDVRESQIGETVVLEGWINRRRDHGGVIFVDLRDRTGLVQVVFSPELFAEPHAQA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++RSE+V+   G V +RS  TIN N+ TG+IE+  + + IL+ +  LPLP   + E  E
Sbjct: 63  HTLRSEYVIRATGKVTARSEGTINPNMDTGRIEVVVEDLTILNSS--LPLPFQLDDEISE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YRFLDLRR  + +N++ R RI+ S+R  +    F+E  TP+LT S+PEGARD+LV
Sbjct: 121 NLRLQYRFLDLRRPDMQRNLMFRHRIMQSVRKHLDGSGFVEVETPMLTRSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQLLM +G+DRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVNPGDFYALPQSPQLFKQLLMMAGYDRYFQIVRCFRDEDLRADRQP-EFTQIDLEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE +D++   E+V+   F+E + G ++     RI Y +A+ +YG D PD+R  + + ++
Sbjct: 240 FVEPNDVMELTESVVVEAFKE-ALGVSIPQPVRRITYAEAMDKYGLDAPDMRITMELKDL 298

Query: 303 TEHFVHSEFRVFSKILSV----NPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           TE    SEF+VF +  ++    N    V  +   GGG   R   D   E+    G  GLA
Sbjct: 299 TEVMKSSEFKVFRQAATLEGRGNEHGLVKVLKVPGGGSLTRKQIDTYTEFVGIYGAKGLA 358

Query: 358 YIF----WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
           YI     W+ D         P+ K L     +AI+     Q GD  FF A          
Sbjct: 359 YIKVNGPWQED-----GWQSPIVKFLGDAEKQAIQEATQAQVGDLLFFGADKASVVNESL 413

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESL 469
              R  + +EL ++    F F W+ DFP  +W+ E ++    H+PFT P       +E+ 
Sbjct: 414 GRLRVKLGKELEMLCDEKFAFVWVTDFPLLDWDNEARRNTAVHHPFTAPHPDDIIYLENA 473

Query: 470 KG----NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
            G    + L  +++  YDLV NG E+  G IR H + +  +    + I +E  E +FG L
Sbjct: 474 DGASVEHPLEKVRSLAYDLVLNGTEVGGGSIRIHDTMLQRRMLELLEIGEEEAEGKFGFL 533

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
            RA Q G PPHGG+A G+DR+V L+LG  ++R+V  FP +Q    L+  +PS V   QL+
Sbjct: 534 LRALQYGAPPHGGLALGLDRLVTLMLGLDSIRDVIAFPKTQKATCLMTEAPSKVDGAQLK 593

Query: 586 ELGLRIVENPK 596
           EL LR    PK
Sbjct: 594 ELHLRSTFKPK 604


>gi|126434932|ref|YP_001070623.1| aspartyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|166225365|sp|A3PZ05|SYD_MYCSJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|126234732|gb|ABN98132.1| aspartyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 590

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/604 (40%), Positives = 342/604 (56%), Gaps = 30/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+ G L  +D G  V L+GWV R R HGG+IF+D+RD  G++QVV   + A  E A  
Sbjct: 3   RSHAAGSLRPADAGQNVTLAGWVARRRDHGGVIFIDLRDASGVSQVVFR-EGAVLEAAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + ++G+V  R     N  I TG IE++A  + +L   E  PLP   + E  E  
Sbjct: 62  LRAEFCVAVEGVVEVRPEGNENPEIPTGGIEVNATSLTVLG--ESAPLPFQLDDEAGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+   K +  R+++  + R  +   +F+E  TP +T S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRREGPGKALRLRSKVNAAAREVLARHDFVEIETPTMTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + DD++   E +L+ ++     G+ +     RI Y +A+RR+GTDKPDLR  + +    E
Sbjct: 239 DADDVIAVSEEILKALWALI--GHDLPTPLPRITYAEAMRRFGTDKPDLRFGLELVECKE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 297 FFADTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEWAKQRGAKGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G +   GPVAK+L     + +   +    GD  FF AG P    +    AR  IA+ 
Sbjct: 348 GDDGTLG--GPVAKNLTDAERDGLAAHVGANPGDCIFFAAGPPKSSRALLGAARIEIAKR 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473
           L +I+ + + F W++D+P +E  E+     D A         H+ FT PQ   E+    D
Sbjct: 406 LDMIDPDAWAFTWVVDWPLFEMAEDATAAGDVAVGSGAWTAVHHAFTAPQPQSEATFDTD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                A  YD+VCNG EI  G IR H  +V  + F+ +GI  +  + +FG L  AF  G 
Sbjct: 466 PAGALADAYDIVCNGNEIGGGSIRIHRRDVQERVFAMMGIEHDEAQEKFGFLLDAFTFGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G DRI  LL    ++REV  FP S    D L G+P+ ++ +Q RE G  I  
Sbjct: 526 PPHGGIAFGWDRITALLARMDSIREVIAFPKSGGGADPLTGAPAPITPQQRRESG--IDA 583

Query: 594 NPKK 597
            PKK
Sbjct: 584 KPKK 587


>gi|291086850|ref|ZP_06344631.2| aspartate--tRNA ligase [Clostridium sp. M62/1]
 gi|291077143|gb|EFE14507.1| aspartate--tRNA ligase [Clostridium sp. M62/1]
          Length = 625

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/597 (39%), Positives = 358/597 (59%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           R+H C +L   ++G  V + GWV + R  GGIIF+D+RD  G+ Q++   A+  S  F  
Sbjct: 34  RSHRCTELSTENIGENVTVMGWVQKSRNKGGIIFVDLRDRSGLLQIIFEEADCGSESFAK 93

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ + G V +RS   +N N+ TG IE+ A  + ILS +E  P P+    +  
Sbjct: 94  AEKLRSEFVIAVTGKVEARSG-AVNENLKTGAIEIRANALRILSESETPPFPIEENSKTK 152

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L KN++ R+R+    R  +  E F+E  TP L  S+PEGARD+L
Sbjct: 153 EELRLKYRYLDLRRPDLQKNLMTRSRVTTLTRAFLAEEGFLEIETPTLIKSTPEGARDYL 212

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME+
Sbjct: 213 VPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDMEL 271

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+L+  E +L+ +F+E   G  +     R+ + +A+ R+G+DKPDLR  + + N
Sbjct: 272 SFVDVDDVLDVNERLLKKLFKEIC-GFDLQLPIQRMTWREAMDRFGSDKPDLRFGMELKN 330

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V+E     +F VF   L    G  V  I A+G  G  R   D + E+A+  G  GLAY+ 
Sbjct: 331 VSETVKDCQFVVFKSAL--ENGGSVRGINAEGQAGMPRKKIDALVEFAKGFGAKGLAYLA 388

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D S   +     AK +      A+   +D + GD   F A           + R  +
Sbjct: 389 VLEDGSYKSS----FAKFMTEEELAALVKAMDGKPGDLLLFAADKDKVVFDVLGNLRLEL 444

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L ++  + F+F W+ +FP  E++EE+ +    H+PFTMP     +L   D  +++A 
Sbjct: 445 ARQLDLLKKDDFKFLWVTEFPLLEYSEEQGRFVAMHHPFTMPMEEDLALIDTDPGAVRAK 504

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H S++  + F  +G +KE    +FG L  AF+ G+PPH G+A
Sbjct: 505 AYDIVLNGTEMGGGSVRIHQSDIQSKMFEVLGFTKEQANEQFGFLLEAFKYGVPPHAGLA 564

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML++GA ++R+V  FP  ++   L+  +PS V  +QL+ELG+ + +  ++
Sbjct: 565 YGLDRMVMLMVGADSIRDVIAFPKVKDASCLMTEAPSPVDEKQLKELGIEVSQEEEQ 621


>gi|19746997|ref|NP_608133.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|56808428|ref|ZP_00366176.1| COG0173: Aspartyl-tRNA synthetase [Streptococcus pyogenes M49 591]
 gi|209560239|ref|YP_002286711.1| aspartyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|24212398|sp|Q8NZ20|SYD_STRP8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238064673|sp|B5XJ82|SYD_STRPZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|19749253|gb|AAL98632.1| putative aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|209541440|gb|ACI62016.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 582

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/593 (39%), Positives = 352/593 (59%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++   
Sbjct: 3   RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++G V +R  +  N  + TG +EL    + IL+ A+  P  +  + E  
Sbjct: 63  AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +T      +F+VFS+  +V       AI  KG     +R   D++ E+A+  G  GLA  
Sbjct: 299 LTVTVKGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W     G +A  GPVAK L  + TE +  +L + + D   F+A D L+  +    A RN
Sbjct: 351 -WVKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++
Sbjct: 406 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I
Sbjct: 526 LAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 578


>gi|330502216|ref|YP_004379085.1| aspartyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328916502|gb|AEB57333.1| aspartyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 590

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/595 (40%), Positives = 354/595 (59%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 2   RSHYCGQLNESLDGQEITLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRAETFAKAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R     NAN+ +G IE+   ++E+L+ AE  P P+    +  E 
Sbjct: 62  RVRSEYVVKITGKVRLRPEGARNANMASGAIEVLGYELEVLNEAETPPFPLNEYTDVGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI +S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 TRLRYRFIDLRRPEMAEKLKLRSRITSSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI++  E ++R +F+E       +   + +   +A+RR+G+DKPDLR P+ + +V 
Sbjct: 241 LDEKDIMDITETMVRNLFKEVLGVEFGALPHMTLA--EAMRRFGSDKPDLRIPLELVDVE 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF+   + +P   V A+   GG    R   D   ++    G  GLAYI   
Sbjct: 299 DQLKDVEFKVFAGPAN-DPKCRVTALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+ K++ + N   I  R+   DGD  FF A D  K  S A  A R  + 
Sbjct: 358 ERAAGVEGLQSPIVKNIPLDNINVILDRVGAVDGDIVFFGA-DKAKIVSEALGALRIKLG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L ++ C  +   W++DFP +E N ++  +   H+PFT P    E L+ N   ++ +  
Sbjct: 417 HDLNLLTCE-WAPLWVVDFPMFEEN-DDGSLTAMHHPFTSPSCSPEELEANPAAAL-SRA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H   +    F  +GIS+E  + +FG L  A + G PPHGG+A 
Sbjct: 474 YDMVLNGTELGGGSIRIHDKAMQQTVFRVLGISEEEQQEKFGFLLDALKYGAPPHGGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA+++REV  FP +Q+   ++  +P  V  + LREL +R+ E PK
Sbjct: 534 GLDRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGVVDGKSLRELHIRLREQPK 588


>gi|295091162|emb|CBK77269.1| aspartyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 601

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/597 (39%), Positives = 358/597 (59%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           R+H C +L   ++G  V + GWV + R  GGIIF+D+RD  G+ Q++   A+  S  F  
Sbjct: 10  RSHRCTELSTENIGENVTVMGWVQKSRNKGGIIFVDLRDRSGLLQIIFEEADCGSESFAK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ + G V +RS   +N N+ TG IE+ A  + ILS +E  P P+    +  
Sbjct: 70  AEKLRSEFVIAVTGKVEARSG-AVNENLKTGAIEIRANALRILSESETPPFPIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L KN++ R+R+    R  +  E F+E  TP L  S+PEGARD+L
Sbjct: 129 EELRLKYRYLDLRRPDLQKNLMTRSRVTTLTRAFLAEEGFLEIETPTLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+L+  E +L+ +F+E   G  +     R+ + +A+ R+G+DKPDLR  + + N
Sbjct: 248 SFVDVDDVLDVNERLLKKLFKEIC-GFDLQLPIQRMTWREAMDRFGSDKPDLRFGMELKN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V+E     +F VF   L    G  V  I A+G  G  R   D + E+A+  G  GLAY+ 
Sbjct: 307 VSETVKDCQFVVFKSAL--ENGGSVRGINAEGQAGMPRKKIDALVEFAKGFGAKGLAYLA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D S   +     AK +      A+   +D + GD   F A           + R  +
Sbjct: 365 VLEDGSYKSS----FAKFMTEEELHALVKAMDGKPGDLLLFAADRDKVVFDVLGNLRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L ++  + F+F W+ +FP  E++EE+ +    H+PFTMP     +L   D  +++A 
Sbjct: 421 ARQLDLLKKDDFKFLWVTEFPLLEYSEEQGRFVAMHHPFTMPMEEDLALIDTDPGAVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H S++  + F  +G +KE    +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTEMGGGSVRIHQSDIQSKMFEVLGFTKEQANEQFGFLLEAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML++GA ++R+V  FP  ++   L+  +PS V  +QL+ELG+ + +  ++
Sbjct: 541 YGLDRMVMLMVGADSIRDVIAFPKVKDASCLMTEAPSPVDEKQLKELGIEVSQEEEQ 597


>gi|226323914|ref|ZP_03799432.1| hypothetical protein COPCOM_01691 [Coprococcus comes ATCC 27758]
 gi|225207463|gb|EEG89817.1| hypothetical protein COPCOM_01691 [Coprococcus comes ATCC 27758]
          Length = 597

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 229/579 (39%), Positives = 344/579 (59%), Gaps = 13/579 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH C +L  +++G  V + GWV + R  GG++F+D+RD  G+ QVV    + D A  E 
Sbjct: 10  RTHRCAELSEANIGEKVTIMGWVQKNRNKGGLVFVDVRDRSGLIQVVFEEGSTDKALLEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+V+ I G V  RS   +N N+ TG IE+  +++ ILS +E  P P+    +  
Sbjct: 70  AAKLRSEFVVAIVGTVEKRSG-AVNENLATGAIEIKPEELRILSESETPPFPIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYRFLDLRR  + +N++ R+R+    R  M  E F+E  TP L  S+PEGARD+L
Sbjct: 129 EEVRLKYRFLDLRRPDIQRNLMMRSRVATLARQFMAKEGFLEIETPFLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ GSFYALPQ+PQ +KQLLM SG+DRYFQI  CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRIHPGSFYALPQSPQIFKQLLMCSGYDRYFQIVKCFRDEDLRADRQP-EFTQMDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L  +F++  + + +     R+ + +A+ R+G+DKPD+R  + + N
Sbjct: 248 SFVDVDDVIDINERLLAHLFKDVLDID-IQLPIQRMTWQEAMDRFGSDKPDIRFGMELVN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           VTE    SEF VF    ++  G  V  I AKG GG  R   D++ ++A+  G  GLAYI 
Sbjct: 307 VTETVKDSEFVVFKN--AIEAGGTVRGINAKGQGGMARKKIDKLVDFAKGYGAKGLAYI- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G V      +K +    T A+   +  ++GD   F A             R  +
Sbjct: 364 -AIHEDGTVK--SSFSKFMTEEETAALIKAMAGENGDLLLFAADKNKVVWDVLGALRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++ +++ N ++F WI +FP  EW++E+ +    H+PFTMP         +D   ++A 
Sbjct: 421 ARQMELLDKNEYKFLWITEFPLLEWSDEQNRFTAMHHPFTMPMEEDLQYIDSDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R    E+  + F  +G + E  + +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIFNQEIQSKMFEVLGFTPEQAQEQFGFLLNAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
            G+DR+VML+    ++R+V  FP  ++  DL+  +P  V
Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASDLMTEAPERV 579


>gi|317010837|gb|ADU84584.1| aspartyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 577

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 228/589 (38%), Positives = 350/589 (59%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DV   V+++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEVSEKDVDKIVKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G V  R A   N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKVRLRGAGLENPKLKTGKIEIVLEELIIENKSATPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR  + ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLSAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+    G+T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQEIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAKDPKNKRIKALNVKGADVIFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            DE       GP+ K L+    + I  R + Q GD  FF AGD      +    R  +A+
Sbjct: 358 EDEIK-----GPLVKFLSEKGLKNILERTNAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ N   F W+++FP +E  + E     AH+PFTMP+    +++  D+  I+A+ Y
Sbjct: 413 MLDLIDKNALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECEDMEEIEAYAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  ++  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEDMQKKVFERINIDEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS +S EQLREL +R+
Sbjct: 527 FDRLIMLMTQSHSIRDVIAFPKTQKASCLLTDAPSPISEEQLRELHIRL 575


>gi|297621745|ref|YP_003709882.1| Aspartyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297377046|gb|ADI38876.1| Aspartyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 592

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/595 (40%), Positives = 355/595 (59%), Gaps = 15/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RTH+CG L  SDV   V LSGWVHR R HGG+IF+D+RD +GITQ+V NP++    F  A
Sbjct: 6   RTHNCGTLRKSDVERSVTLSGWVHRRRDHGGLIFIDLRDRFGITQLVFNPETRPELFSNA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           + +RSEWV+ + G V+ R+    N  + TG+IE+   ++E+LS A   P  +  +  E  
Sbjct: 66  EKLRSEWVISVKGTVIPRAEGMANPRLETGEIEVDIHEMEVLSKANTPPFSICDDFIEAN 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR KYR+LD+RR  +  ++V R +++ ++R  +  + FIE STPIL  S+PEGARD+L
Sbjct: 126 EEIRLKYRYLDIRRGKIKDHLVLRHKVMQTVRNVLNCQEFIEISTPILGKSTPEGARDYL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ G+FYALPQ+PQ +KQLLM +G DRYFQIAPCFRDED R+DR P EF Q+D+EM
Sbjct: 186 VPSRIHPGTFYALPQSPQLFKQLLMVAGMDRYFQIAPCFRDEDLRADRQP-EFTQIDIEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF   +D+LN +E +++ +F++   G  +   F R+ Y D + R+GTD+PD R  + +  
Sbjct: 245 SFGTPEDLLNIIEEMVKKIFKD-CLGLEIKIPFRRLPYKDCMDRFGTDRPDTRFGMELST 303

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +    SEF VF   L  + G  + AI  KGG   +R   ++   +    G  GLA   
Sbjct: 304 INDIAKRSEFSVFKNQL--DNGGTIKAICVKGGAEISRREIEQYTNFVGRLGIKGLA--- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           W   + G +A    + K  +    + +  RL + +GD  F I GD ++  +   D  R  
Sbjct: 359 WMKMQEGALASN--IVKFFSPELQKELIERLQVDEGDLIFMI-GDSVELVNQGLDHLRRK 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IAQ+  +   +  +F W+ DFP +  + E  +++  H+PFT P      L  +D L +++
Sbjct: 416 IAQDRKLAADDHLDFLWVTDFPLFGKDAETGRLESLHHPFTSPHVEDMHLLDSDPLHVRS 475

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           + YDLV NG+EI  G  R H   +  + F  + I+ E    +FG    A + G PPH GI
Sbjct: 476 YGYDLVLNGYEIGGGSQRIHDQSLQKKIFDLLQITPEEQNEKFGFFLEALKYGTPPHLGI 535

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR++ML+    N+REV  FP +Q   DL+   PS V+ +QLR+L L + ++
Sbjct: 536 ALGLDRLIMLMAQTDNIREVIAFPKTQKASDLMNQCPSPVAEDQLRDLHLSVTDD 590


>gi|256964757|ref|ZP_05568928.1| aspartyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|307272838|ref|ZP_07554085.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|256955253|gb|EEU71885.1| aspartyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|306510452|gb|EFM79475.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0855]
          Length = 589

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/592 (40%), Positives = 348/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+ +   +EIA
Sbjct: 4   RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    +
Sbjct: 64  DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR   EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDR-QLEFTQIDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    EN+L  V +E + G  +S  F R+ YD+A+ RYG+DKPD R  + + +V
Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMSYDEAMARYGSDKPDTRFAMELIDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            E     +F+VF   L  N G+ V A+ AKG     +R   D + ++    G  GLA++ 
Sbjct: 302 AEVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK L  V+ E I    + + GD   F A  P    +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+         D  S+ A 
Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVDRLATDPASVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA
Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|313902374|ref|ZP_07835777.1| aspartyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467305|gb|EFR62816.1| aspartyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 615

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/591 (40%), Positives = 342/591 (57%), Gaps = 10/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R   CG++    VG  + ++GWVHRVR  GG+ F+++RD  G  Q+V N   A  E+   
Sbjct: 28  RDLGCGEVRPEHVGRTLTVAGWVHRVRDLGGLRFVEVRDRTGRLQLVINRAEAPPEVVQA 87

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +R+E+V+   G V  R+ E +N  + TG++EL   ++ IL+ ++  P  +    E  
Sbjct: 88  AEGLRAEFVVAARGTVRRRAPEAVNPRLATGEVELVPAQLWILATSKTPPFELDAAAEVD 147

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +YR+LDLRR  + +N+  R R    +R       F+E  TP+LT S+PEGARD+L
Sbjct: 148 EGLRLRYRYLDLRRPAMFRNLWLRHRAYQVVRRYFDRNGFLEVETPMLTRSTPEGARDYL 207

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ G FYALPQ+PQ +KQLLM  G +RYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 208 VPSRLHPGRFYALPQSPQLFKQLLMVGGIERYFQIVRCFRDEDLRADRQP-EFTQIDVEM 266

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+L   E ++  +++E   G  V     R+ Y +A+ RYG+DKPDLR   ++ +
Sbjct: 267 SFVDVDDVLAMAEGMMAELWQELL-GVEVPLPLPRLTYAEAMARYGSDKPDLRYEPVVVD 325

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V++ FV + FR F   L+   G  V A+ A GG   +R   D +NE AR+ G PG+A+I 
Sbjct: 326 VSDVFVQTGFRGFQAALAS--GGAVRALRAPGGAALSRKELDALNETARAAGSPGVAWIA 383

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E    A  GPV K        A+  RL+++ GD     A +P +        R  +
Sbjct: 384 --VPEPDPEAWRGPVVKFFTPEERAALAGRLELRAGDLVLLAADEPERASVVLGKLRLQL 441

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ L       + F W++DFP  EW+EEE++    H+PFT P+        +D   ++A 
Sbjct: 442 AERLAWPRVKEWAFTWVVDFPLLEWDEEEQRYVARHHPFTSPRDEDLDRLESDPAGVRAR 501

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+EI  G IR H  +V  + F  +G+  E    RFG L  AF  G PPHGGIA
Sbjct: 502 AYDLVLNGYEIGGGSIRIHRRDVQERVFRAIGLPPEKARERFGFLLEAFDYGPPPHGGIA 561

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G DRIVML  GA ++R+V  FP +    D L G+P+ V   QL EL LRI
Sbjct: 562 FGFDRIVMLAAGASSIRDVIAFPKTARAVDPLTGAPAEVDPGQLEELHLRI 612


>gi|320093764|ref|ZP_08025612.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319979301|gb|EFW10796.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 664

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/603 (39%), Positives = 349/603 (57%), Gaps = 31/603 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +H  RTH+ G LG   +G  V L+GWV R R HGG+ F+D+RD  GI QVV   +S    
Sbjct: 65  LHVLRTHTIGSLGKDLIGQTVTLTGWVDRRRDHGGVAFVDLRDASGIAQVVVRDES---- 120

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
           +A  +RSE+VL + G V++R     N N+ TG IE+    IEIL+ +  LP  V    E 
Sbjct: 121 VAHELRSEFVLKVTGEVVARPEGNENPNLPTGAIEVMGDDIEILNPSAPLPFQVSSHAED 180

Query: 120 ---YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                E +R KYR+LDLRR+   + +  R+ +  + R  + A +F+E  TP LT S+PEG
Sbjct: 181 SGNVGEEVRLKYRYLDLRREPEQRALRLRSMVSRAARDTLYAHDFVEIETPTLTRSTPEG 240

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ +KQ+LM +G +RYFQIA C+RDED R+DR P EF Q
Sbjct: 241 ARDFIVPARLAPGSWYALPQSPQLFKQMLMVAGMERYFQIARCYRDEDFRADRQP-EFTQ 299

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+EMSFV+QDD++   E+VLR V+     G  ++    R+ Y DA+ RYG+DKPDLR  
Sbjct: 300 LDIEMSFVDQDDVIAVAEDVLRNVWALI--GYDLATPIPRMTYKDAMERYGSDKPDLRFG 357

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           + +  +T++F  + FRVF       P      +P  G    R F D+  EWA+++G  GL
Sbjct: 358 LELTELTDYFKDTPFRVFQA-----PYVGAVVMPGGGSQPRRTF-DKWQEWAKARGAKGL 411

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+   + E G +   GPVAK+++    E +      + GD  FF AG P         A
Sbjct: 412 AYV--TVAEDGALG--GPVAKNISEAEREGLAEATGAKPGDCIFFAAGKPTPSRELLGAA 467

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGM 466
           R  I +  G+++ + + F W++D P ++   + E + D A         H+ FT P+   
Sbjct: 468 RLEIGKRCGLVDPDAWAFTWVVDAPLFKPTGDAEAEGDVALGHSAWTAVHHAFTSPKPEW 527

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
                 D  +  A+ YD+VCNG EI  G IR H  +V  + F+ +GI +E  + +FG L 
Sbjct: 528 VDSFDEDPGNALAYAYDIVCNGNEIGGGSIRIHRRDVQNRVFAVMGIGEEEAQAQFGFLL 587

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            AF+ G PPHGG+A G DRIV LL  ++++R+V  FP S    D L  +P+ ++  Q +E
Sbjct: 588 DAFKFGAPPHGGVAFGWDRIVALLTKSESIRDVIAFPKSGGGYDPLTDAPAPITPAQRKE 647

Query: 587 LGL 589
            G+
Sbjct: 648 AGV 650


>gi|126654003|ref|ZP_01725838.1| aspartyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589520|gb|EAZ83663.1| aspartyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 589

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/590 (39%), Positives = 354/590 (60%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH+  +L  +  G  V L GWV R R  GG+IF+D+RD  GITQVV +PD A    +A 
Sbjct: 4   RTHASNELSETLQGEKVVLKGWVQRRRDLGGLIFIDLRDRTGITQVVFSPDVAEAHALAD 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I+G V+ R+ + IN N+  G+IE+ A  + +++ A+  P  +    +  E 
Sbjct: 64  KVRSEYVIEIEGTVILRTEDQINPNVPNGKIEVEATNLVVINTAKTTPFQIEDRTDVSED 123

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  +      R+ +  ++R  +  E F+E  TPILT S+PEGARD+LVP
Sbjct: 124 LRLKYRYLDLRRPVMFDTFKMRSDVTRTIRNFLQNEGFLEVETPILTKSTPEGARDYLVP 183

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM +GF++YFQIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 184 SRVHEGEFYALPQSPQLFKQLLMVAGFEKYFQIARCFRDEDLRADRQP-EFTQVDIETSF 242

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + Q+++L   E +++ V +E   G  +   F R+ Y +A+ RYG+DKPD+R  + +  + 
Sbjct: 243 LTQEEVLEMNERLIQAVMKEV-KGIDIPAPFQRMKYQEAMDRYGSDKPDVRFGLELVALN 301

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361
           + F    F+VF+   +V  G +V +I  KG     +R   D + ++    G  GLA++  
Sbjct: 302 DVFEDCGFKVFAD--TVAQGKQVKSINIKGAADKYSRKDMDELTKFVGIYGAKGLAWL-- 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++ E G     GP+AK  +     A+  R+  + GD   F+A       +     R+ + 
Sbjct: 358 KVTEEGL---NGPIAKFFDEALAAALIERMGAEVGDILVFVADKASVVAASLGALRSKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           Q+L +I+ + F F WI D+P +E++EE+ +   AH+PFT P      L   D  +++A  
Sbjct: 415 QDLELIDESQFAFLWITDWPLFEYSEEDGRYYAAHHPFTRPFDEDIPLMDTDPGAVRAQA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  ++  + F  +G S+E  + +FG L  AF+ G+PPH G+A 
Sbjct: 475 YDIVLNGYELGGGSLRIYERDLQEKMFELLGFSEEEAQAQFGFLLEAFEYGVPPHAGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR VMLL G  N+R+   FP + +   L+  +PS VS EQL EL L I
Sbjct: 535 GLDRFVMLLAGRHNLRDTIAFPKTASASCLMTEAPSEVSTEQLSELSLAI 584


>gi|326795232|ref|YP_004313052.1| aspartyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326545996|gb|ADZ91216.1| aspartyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 589

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 232/589 (39%), Positives = 349/589 (59%), Gaps = 9/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG+L   ++   + L GWVHR R HGG+IFLDIRD  GITQVV +PD A  F +A 
Sbjct: 2   RSHYCGELTAKNISEEITLCGWVHRRRDHGGVIFLDIRDRDGITQVVFDPDRAESFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+V+ + GLV  R   T+N N+ TG+IE+  +++EIL+ +E  P  +   +   E 
Sbjct: 62  SVRNEYVVKVSGLVRPRPEGTVNPNMTTGEIEVLGKELEILNRSETPPFQLDEHQNVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR K RF+DLRR  + + +  R+++ + +R  +    F++  TPILT ++PEGARD++VP
Sbjct: 122 IRLKSRFVDLRRPEMQEKLRFRSKVTSVLRRHLDENGFLDIETPILTRATPEGARDYVVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR +QGSF+ALPQ+PQ +KQ+LM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHQGSFFALPQSPQLFKQMLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++ I+   E+++  +F+E  + +     F R+ Y +A+  YG+DKPDLR P+ +  V+
Sbjct: 241 MGEEAIMEMTESMIVSLFKELKDVDL--GEFPRMPYAEAMETYGSDKPDLRIPLTIQTVS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +V+P   V A+   GG    R   D   ++    G  GLAYI   
Sbjct: 299 DLMEGVDFKVFSGP-AVDPKGRVAALKVPGGNSLTRKQIDAYTKFVGIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                      P+ K L +   +A+  R D  DGD  FF A             R  + +
Sbjct: 358 NKADLEEGLQSPIVKFLPVEVRKALLERTDANDGDLIFFGADKATVVNEALGALRCKLGE 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +  C  +   W++DFP +E    +  +   H+PFT P    E LK N + ++    Y
Sbjct: 418 DLNLYTCE-WAPLWVVDFPMFE-ELPDGGVTAIHHPFTAPSCSPEELKANPVAALSQ-AY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R H  E+    F  + I++E  + +FG L  A + G PPHGG+A G
Sbjct: 475 DMVLNGTELGGGSVRIHQPEMQQTVFELLNINEEEQQEKFGFLLDALKYGAPPHGGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR+VML+  + ++R+V  FP +Q+   LL  +P  VS +QL+EL +R+
Sbjct: 535 LDRLVMLMTDSASIRDVIAFPKTQSATCLLTQAPGDVSDKQLKELSIRV 583


>gi|54294481|ref|YP_126896.1| aspartyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|62287531|sp|Q5WWA3|SYD_LEGPL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|53754313|emb|CAH15790.1| Aspartyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 593

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/591 (39%), Positives = 349/591 (59%), Gaps = 8/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH C  +    +   + + GWVH  R HGG+IFLDIRD  G+ QVV  P++   F IA+
Sbjct: 2   RTHYCSAVNELSLDKQITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+V+ + G+V  R    IN  + TG++E+   ++EIL+ +   P      +   E 
Sbjct: 62  KLRSEFVVRVTGIVRKRPEGMINDKMETGRVEVIGTQLEILNQSPTPPFLPDDHQVINED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R+KYR++DLRR  + K +  R ++ + +R  +  +NF++  TP+LT ++PEGARD+LVP
Sbjct: 122 LRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF QLD+EM+F
Sbjct: 182 SRVHPGQFYALPQSPQLFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DIL  +E +L+ VF+E  N  T+ +   R+ Y +A+ RYG+DKPDLRNP+ + ++ 
Sbjct: 241 INEEDILQLIEGLLKIVFKEILN-ITLPDKLPRMPYKEAMTRYGSDKPDLRNPLELIDIA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + +F VF+   + N G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 300 DLVKNCDFNVFASAANDNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVN- 358

Query: 364 DESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           D S  +AG+  P+ K L+    ++I  R+++Q GD  FF A             RN +  
Sbjct: 359 DLSAGMAGLQSPILKFLSETAVQSILNRVEVQTGDVIFFGADKAHVVNESMGALRNKLGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +  +IN   ++  W++D+P +E + +  K+   H+PFT PQ    E+L+     ++ A  
Sbjct: 419 DRNLINSG-WQLLWVVDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTL-AKA 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+EI  G IR H  E+    F  +GI ++    +FG L  A Q G PPHGGIA 
Sbjct: 477 YDIVINGYEIGGGSIRIHQPELQKTVFDLIGIDEQEAHEKFGFLLDALQYGAPPHGGIAL 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR+ MLL  + ++R+V  FP +Q     L  +PS     QL ELG+R+ 
Sbjct: 537 GIDRLAMLLTDSTSIRDVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLA 587


>gi|90020560|ref|YP_526387.1| aspartyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|122996443|sp|Q21MA4|SYD_SACD2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|89950160|gb|ABD80175.1| aspartyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 594

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/601 (39%), Positives = 360/601 (59%), Gaps = 18/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +  S++   + L GWV R R HGG+IF+D+RD  GI QVV +PD+A  F +A 
Sbjct: 2   RSVYCGVVNTSNIDQEITLCGWVDRRRDHGGVIFIDLRDREGIVQVVFDPDAADKFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR E+VL + G V +RS  T+NAN+ TGQIE+    +EIL+ AE  P  +       E 
Sbjct: 62  KVRPEYVLRVTGKVRARSEATVNANMATGQIEVYGTDLEILNSAETPPFQLDEHTNVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRRD + + +  R+++ N++R  +   +F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKYRYLDLRRDAMQQRLKFRSKVTNAIRNYLDDNDFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHDGKFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ I++  E ++  +F E          F R+ Y +A+ +YG+DKPD+R P+ M  + 
Sbjct: 241 MDEEQIMSVTEGMISKLFRELKGVEL--GEFPRMPYAEAMEKYGSDKPDMRIPLEMVEIK 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   S +P   V A+   GGG   R   D   ++    G  GLAYI  +
Sbjct: 299 DLMASVDFKVFSGPAS-DPKGRVTAMKVPGGGEIPRKKIDAYTKFVSIYGAKGLAYI--K 355

Query: 363 LDESGNVAG--MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
           +++  ++ G    P+ K L     +A+  RL++++GD  FF A D  K  + A  A R  
Sbjct: 356 VNDKTDLEGGLQSPIVKFLPQDVLQALLDRLEVENGDLIFFGA-DSAKVVTEALGALRCE 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + ++L +  C  +   W++DFP +E   E+  +   H+PFT P    E L  N   ++ +
Sbjct: 415 LGKDLNLYTCE-WAPLWVVDFPMFE-ELEDGSLTALHHPFTAPSCSPEELSANPATAL-S 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H   +  + F  +GI +E    +FG L  A + G PPHGG+
Sbjct: 472 RAYDMVLNGTELGGGSIRIHDQSMQQEVFRVLGIGEEEQREKFGFLLDALKYGAPPHGGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR---IVENPK 596
           A G+DR++ML+ GA ++R+V  FP +Q+   ++  +P  V  +QL EL +R   +V  PK
Sbjct: 532 AFGLDRLIMLMTGASSIRDVIAFPKTQSAACVMTDAPGAVDKKQLEELHIRLRPVVAQPK 591

Query: 597 K 597
           +
Sbjct: 592 E 592


>gi|315452904|ref|YP_004073174.1| aspartyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315131956|emb|CBY82584.1| aspartyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 584

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 235/595 (39%), Positives = 343/595 (57%), Gaps = 18/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH C  +G + +G  V L GW H  R HGG+IF+D+RD  G+ Q+V +P S  ++ A  
Sbjct: 3   RTHLCAQVGEALLGQRVELCGWCHNYRDHGGVIFIDLRDKSGLVQLVCDPQSPAYQEANL 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR E+VL   G+V  R     N  + TG+IE+  + + I + +   P+ + G+    E +
Sbjct: 63  VRHEFVLIAHGIVRLRGEGLENPKLKTGKIEVVLESLRIENKSLTPPITI-GDSSVNEDL 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YRFLDLR    ++    R+R+  ++R  +   +F+E  TP+L  ++PEGARDFL+PS
Sbjct: 122 RLQYRFLDLRSPKSYEIFKMRSRVAKAVRDCLDNLDFLEIETPMLAKTTPEGARDFLIPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ G+F+ALPQ+PQ +KQLLM +G DRY+QI  CFRDED R+DR P EF Q+D+EMSF 
Sbjct: 182 RVHDGAFFALPQSPQLFKQLLMVAGMDRYYQIVKCFRDEDLRADRQP-EFTQVDVEMSFC 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            Q+D+L   + +L+ VF+  S G  VS  F R+ Y +A+ +YG+DKPDLR  + +  V +
Sbjct: 241 TQEDVLEVAQTLLQTVFK--SVGVEVSTPFKRMDYMEAMEKYGSDKPDLRFELPLVEVGD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            FV S   +F  I S +      A+   GG    +R +      + RS G  GLAY+  +
Sbjct: 299 LFVDSSNEIFRSIASDSKKNRFKALCVPGGDSFCSRKYLSEAESFVRSFGAQGLAYLQIK 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +        GP+ K L+    E +  R   Q GD  FF AG       +    R  + Q
Sbjct: 359 PE-----GAKGPLVKFLSPERLEELLARTQAQVGDILFFGAGAKKVVWDYMGRLRLKLGQ 413

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+I+ N F   W++DFP +E    E K+  AH+PFTMP+     L+  DL  +++  Y
Sbjct: 414 DLGLIDENVFNLLWVVDFPMFE--SAEGKLSAAHHPFTMPK----DLENTDLEEMRSIAY 467

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R H  E   + F  +GIS +  + +FG    A + G PPH G A G
Sbjct: 468 DIVLNGVELGGGSVRIHKEETQAKVFELLGISPQEAQEKFGFFLEALKYGAPPHAGFALG 527

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL    ++R+V  FP +Q    LL  +PS  S EQLREL +R+  NPK+
Sbjct: 528 LDRLVMLLAKVPSIRDVIAFPKTQKATCLLSQAPSEASEEQLRELHIRL-RNPKR 581


>gi|167758800|ref|ZP_02430927.1| hypothetical protein CLOSCI_01142 [Clostridium scindens ATCC 35704]
 gi|167663540|gb|EDS07670.1| hypothetical protein CLOSCI_01142 [Clostridium scindens ATCC 35704]
          Length = 597

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/593 (40%), Positives = 353/593 (59%), Gaps = 13/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH CG+L +++ G  V + GWV + R  GG++F+D+RD  GI QVV    + D+A  E 
Sbjct: 10  RTHRCGELSIANAGETVTIMGWVQKNRNKGGLVFIDVRDRSGIIQVVFEEGSTDAALIEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+V+ I G V  RS   +N N+ TG+IE+   ++ ILS AE  P P+    +  
Sbjct: 70  AARLRSEYVIAIAGTVSKRSG-AVNENLATGEIEVIPTELRILSEAETPPFPIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L +N++ R+R+    R  +  E F+E  TPIL  S+PEGARD+L
Sbjct: 129 EELRLKYRYLDLRRPDLQRNLLLRSRVATLTRQFLSEEGFLEIETPILGKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FY LPQ+PQ +KQLLM SG DRYFQIA CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGQFYGLPQSPQLFKQLLMCSGCDRYFQIAKCFRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L  +F++   G  V+    R+ + +A+ RYG+DKPD R  + + +
Sbjct: 248 SFVDVDDVIDVNERLLAKLFKDVL-GVEVALPIPRMTWQEAMDRYGSDKPDTRFGMELTD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           VTE     EF VF    ++  G  V  I AKG GG  R   D++ ++A+  G  GLAYI 
Sbjct: 307 VTEVVKDCEFVVFKG--AIENGGTVRGINAKGQGGMARKKIDKLVDFAKGFGAKGLAYI- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E GNV      AK +      A+   ++ + GD   F A             R  +
Sbjct: 364 -AIQEDGNVK--SSFAKFMTEAQMNALIRAMNGEAGDLLLFAADKNKVVWDVLGSLRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++ ++N + ++F WI +FP  EW+EE+ +    H+PFTMP     +   +D   ++A 
Sbjct: 421 ARQMELLNKDEYKFLWITEFPLLEWSEEQNRYVAMHHPFTMPMEEDLNYLESDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+  NG EI  G +R    +V  + F  +G +KE  + +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDITLNGNEIGGGSVRIFQDDVQERMFEALGFTKEQAQEQFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR+VML+    ++R+V  FP  ++   L+  +P+ V  +QL ELGL + E
Sbjct: 541 YGLDRLVMLMAKEDSIRDVMAFPKVKDASCLMTAAPNLVDTKQLDELGLALKE 593


>gi|313618813|gb|EFR90703.1| aspartyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 591

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 236/594 (39%), Positives = 341/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTSYCGELNETHIGQSVILHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGKVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I    E++L  V +E  N  T+   F R+ Y +A+ R+G+DKPD+R  + + NV
Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           +E     +F+VF    ++  G EV AI AK    N  R   D +  +  + G  GLA   
Sbjct: 302 SEVVKDVDFKVFQS--AIENGGEVKAINAKAAATNFSRKDLDALGVFVANYGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E+G +   GP+AK         ++  L  +DGD   F A       +     RN +
Sbjct: 357 WLKVEAGELK--GPIAKFFPEDKATELQAALQAEDGDLLLFAADKADIVAASLGALRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L +IN +   F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A 
Sbjct: 415 GKDLDLINEDELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA
Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMEALEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+ 
Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSAAQLAELKLETVKK 588


>gi|169829345|ref|YP_001699503.1| aspartyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|238688193|sp|B1HV71|SYD_LYSSC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|168993833|gb|ACA41373.1| Aspartyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 589

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/590 (39%), Positives = 354/590 (60%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH+  +L  +  G  V L GWV R R  GG+IF+D+RD  GITQVV +PD A    +A 
Sbjct: 4   RTHASNELSETLQGEKVVLKGWVQRRRDLGGLIFIDLRDRTGITQVVFSPDVAEAHALAD 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I+G V+ R+ + IN N+  G+IE+ A ++ +++ A+  P  +    +  E 
Sbjct: 64  KVRSEYVIEIEGTVILRTEDQINPNVPNGKIEVEATRLVVINTAKTTPFQIEDRTDVSED 123

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  +      R+ +  ++R  +  E F+E  TPILT S+PEGARD+LVP
Sbjct: 124 LRLKYRYLDLRRPVMFDTFKMRSDVTRTIRNFLQNEGFLEVETPILTKSTPEGARDYLVP 183

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM +GF++YFQIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 184 SRVHEGEFYALPQSPQLFKQLLMVAGFEKYFQIARCFRDEDLRADRQP-EFTQVDIETSF 242

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + Q+++L   E +++ V +E   G  +   F R+ Y +A+ RYG+DKPD+R  + +  + 
Sbjct: 243 LTQEEVLEMNERLIQAVMKEV-KGIDIPAPFQRMKYQEAMDRYGSDKPDVRFGLELVALN 301

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361
           + F    F+VF+   +V  G +V +I  KG     +R   D + ++    G  GLA++  
Sbjct: 302 DVFEGCGFKVFAD--TVAQGKQVKSINIKGAADKYSRKDMDELTKFVGIYGAKGLAWL-- 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++ E G     GP+AK  +     A+  R+  + GD   F+A       +     R  + 
Sbjct: 358 KVTEEGL---NGPIAKFFDEALAAALIERMGAEVGDILVFVADKASVVAASLGALRTKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           Q+L +I+ + F F WI D+P +E++EE+ +   AH+PFT P      L   D  +++A  
Sbjct: 415 QDLDLIDESQFAFLWITDWPLFEYSEEDGRYYAAHHPFTRPFDEDIPLMDTDPSAVRAQA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  ++  + F  +G S+E  + +FG L  AF+ G+PPH G+A 
Sbjct: 475 YDIVLNGYELGGGSLRIYERDLQEKMFELLGFSEEEAQAQFGFLLEAFEYGVPPHAGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR VMLL G  N+R+   FP + +   L+  +PS VS EQL EL L I
Sbjct: 535 GLDRFVMLLAGRHNLRDTIAFPKTASASCLMTEAPSEVSPEQLSELSLAI 584


>gi|32267300|ref|NP_861332.1| aspartyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|46577202|sp|Q7VF76|SYD_HELHP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|32263353|gb|AAP78398.1| aspartyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 581

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 235/589 (39%), Positives = 342/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH C +LG   +G+ V++ GW +  R HGG++F+D+RD  GI Q+V +P +    IA S
Sbjct: 3   RTHLCAELGEEHIGTEVQVCGWCNTYRDHGGVVFIDLRDKSGIVQLVCDPSTQAHAIASS 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR E+VL   G V +R A   N  + TG IE+    + I + +   P+ + G+    E +
Sbjct: 63  VRDEYVLVAKGKVRARGAGLENPKLKTGMIEIVLNSLIIENKSPTPPIAI-GDESVNEEL 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    +     R+    + R  +    F+E  TPILT ++PEGARD+LVPS
Sbjct: 122 RLKYRYLDLRSPKAYNIFKIRSDAAIATRNSLQKMGFLEVETPILTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+QG FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMSF 
Sbjct: 182 RVHQGEFYALPQSPQLFKQLLMMSGFDKYFQIAKCFRDEDLRADRQP-EFTQIDIEMSFC 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQ+DI++  EN+L+ +F   + G  +   F+R+ Y  A+  YG+DKPDLR  + +  V +
Sbjct: 241 EQEDIISVAENLLKDIFS--ACGTEIEIPFMRLPYAQAMESYGSDKPDLRFCMPLVEVGD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            FV S   +F  I   +    + A+  KGG    +R       ++ R  G  GLAYI  +
Sbjct: 299 LFVDSSNAIFKNIAQDSKNNRIKALCVKGGDTFFSRKTLGEAEDFVRKFGAKGLAYIQIK 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E       GP+ K ++      +  R+  + GD  FF AG       +    R  +A+
Sbjct: 359 ENEL-----KGPLVKFISESALNELVSRVKAEVGDIIFFGAGAKKIVWDYMGRLRLKVAE 413

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ++ +IN N ++F W++DFP +E  ++E K    H+PFTMP      L   D+  I +  Y
Sbjct: 414 DMKLINENEYKFLWVVDFPMFE--KDEGKTKALHHPFTMPN----DLDKEDIEEITSVAY 467

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H   +  + F  +GIS +  E++FG L  A   G PPHGGIA G
Sbjct: 468 DVVLNGIELGGGSIRIHKDSIQKRVFELLGISTQEAEDKFGFLLEALSFGAPPHGGIAIG 527

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++MLL  ++++R+V  FP +Q     L  +PS V+ EQL+EL +R+
Sbjct: 528 FDRLIMLLSKSQSIRDVIAFPKTQRATCPLTLAPSKVNDEQLKELHIRV 576


>gi|242373929|ref|ZP_04819503.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348483|gb|EES40085.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 588

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/592 (41%), Positives = 354/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD      ++A
Sbjct: 4   RTTYCGLVTEELLNEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALKVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           ++VRSE+V+ ++G+V  R AET+N  I TGQ+E+    IEI++ +E  P  +  E     
Sbjct: 64  ETVRSEYVVEVEGVVTKRDAETVNPKIKTGQVEVQVSNIEIINKSETPPFAINEENVNVD 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGARD+L
Sbjct: 124 ENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDDNGFFDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D+++  E +LR V ++   G  V   F R+ Y +A+ RYG+DKPD R  + + N
Sbjct: 243 SFVDQEDVISMGEEMLRKVVKDV-KGIDVPAPFPRMTYAEAMDRYGSDKPDTRFDMELIN 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V++     +F+VF   +  N G E+ AI A+G      R   D + E+    G  GLA++
Sbjct: 302 VSQLGKDMDFKVFKDTVE-NDG-EIKAIVAEGAADKYTRKDMDALTEFVNIYGAKGLAWV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+A+     N E ++     + GD   F+A  P          R  
Sbjct: 360 --KVVEDG---LSGPIARFFEDANVETLKELTGAKPGDLVMFVADKPSVVAQSLGALRIK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+ +   F W+ D+P  E++E+ K+   AH+PFT P+    +   ++  + +A
Sbjct: 415 LAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKQEDIAKLDSEPENAQA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G S E  + +FG L  AF+ G PPHGGI
Sbjct: 475 NAYDIVLNGYELGGGSIRIHNGELQQKMFEVLGFSAEQAQEQFGFLLDAFKYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL+EL LRI
Sbjct: 535 ALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGQVSDKQLQELSLRI 586


>gi|312891263|ref|ZP_07750782.1| aspartyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311296223|gb|EFQ73373.1| aspartyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 581

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 236/591 (39%), Positives = 340/591 (57%), Gaps = 16/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RTH+CGDL +S +G  V L GWV + R  GG  F+D+RD YG+TQ+V N D+  A  E++
Sbjct: 3   RTHTCGDLNISHLGQTVTLCGWVQKSRDLGGTTFIDVRDRYGLTQLVFNTDTDVALREVS 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +  E+V+ + G V+ RS +  NA + TG IE++  +IE+L+ A+  P  +  + +  E
Sbjct: 63  RGLGREFVIKVTGKVVERSNK--NAKLSTGDIEITVAEIEVLNSAKIPPFLIEDDTDGGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +  N++ R ++   +R  +   NFIE  TP+L  S+PEGARDF+V
Sbjct: 121 ELRAKYRYLDLRRAPIRNNMILRHKMAQEVRKYLDGMNFIEVETPVLIKSTPEGARDFVV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 181 PSRMNAGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q+DILNT E + R +F+     + +  +F R+ Y DA+R YG+DKPD+R  +    +
Sbjct: 240 FITQEDILNTFEGLARTLFKNVKGIDLI--DFPRMQYADAMRLYGSDKPDVRFGMQFVEL 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +      F VF      N G  V  I AKG     R   D + EW +         I+ 
Sbjct: 298 NDIVKGKGFGVFD-----NAGL-VVGINAKGAADYTRKQLDELTEWLKRPQIGATGLIYL 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R +  G++     V K  N    +      D Q GD    +AG   K      + R  + 
Sbjct: 352 RHNSDGSLK--SSVDKFYNEDELKKWSAAFDTQPGDLVLILAGQTDKVRKQLNELRLEMG 409

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             LG+ + N F   W++DFP  EW+EE  +    H+PFT P+    +L   D  +++A  
Sbjct: 410 TRLGLRDKNTFAPLWVLDFPLLEWDEETSRYHAMHHPFTSPKPEDIALLETDPGAVRANA 469

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F ++G S E  + +FG L  AF+ G PPHGGIA 
Sbjct: 470 YDMVINGIEVGGGSIRIHDRELQALMFKHLGFSPEEAQKQFGFLMDAFEFGAPPHGGIAF 529

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G DR+  +  G  ++R+V  FP + +  D+++ SPST++  QL EL ++  
Sbjct: 530 GFDRLCSIFAGLDSIRDVIAFPKNNSGRDVMIDSPSTIADAQLNELKIKTT 580


>gi|94991414|ref|YP_599514.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94544922|gb|ABF34970.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 599

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/593 (39%), Positives = 351/593 (59%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++   
Sbjct: 20  RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 79

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++G V +R  +  N  + TG +EL    + IL+ A+  P  +  + E  
Sbjct: 80  AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 137

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 138 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 197

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 198 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 256

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++ +
Sbjct: 257 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 315

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +T      +F+VFS+  +V       AI  KG     +R   D++ E+A+  G  GLA  
Sbjct: 316 LTVTVKGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 367

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W     G +A  GPVAK L  + TE +  +L + + D   F+A D L+  +    A RN
Sbjct: 368 -WVKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 422

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++
Sbjct: 423 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 482

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E+  + F  +G + +    +FG L  A   G PPHGG
Sbjct: 483 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANAQFGFLLEAMDYGFPPHGG 542

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I
Sbjct: 543 LAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 595


>gi|313892012|ref|ZP_07825613.1| aspartate--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119655|gb|EFR42846.1| aspartate--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 599

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/589 (40%), Positives = 353/589 (59%), Gaps = 11/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  C ++ +++ G  V L+GWV   R HGG+IF+D+RD  GI Q+V +P      F  A
Sbjct: 9   RTCECSNVSIAECGKEVTLAGWVQTRRDHGGLIFIDLRDRSGIVQLVFSPQHGEEAFHKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VRSE+VL + G+V  RS +TIN  +  G IE+   ++ +L+ ++  P  V    +  E
Sbjct: 69  EDVRSEYVLAVKGVVRERSEDTINEKMKNGNIEVVVSEMRVLNKSKTPPFYVEDGIDVDE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR K+R++DLRR  +  +++ R +I++++R  M    ++E  TPILT S+PEGARD+LV
Sbjct: 129 NIRLKHRYIDLRRPEMLNHLIMRHKIVHNIREYMNKHGYLEIETPILTKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G F+ALPQ+PQ +KQLLM SG ++YFQIA CFRDED R+DR P EF QLD+E+S
Sbjct: 189 PSRVNPGEFFALPQSPQLFKQLLMVSGVEKYFQIARCFRDEDLRADRQP-EFTQLDIEVS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +Q+ IL+ ME +++ +F+E  N + V   F RI +DDA+  YG+DKPDLR  +  ++V
Sbjct: 248 FEDQEYILSLMERMMQQLFKEILNID-VPVPFKRIKWDDAMNLYGSDKPDLRFDMHFYDV 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+     +F+VF  I  V+ G  + AI  KG     R   D + ++    G  G+ ++ +
Sbjct: 307 TDLLRECDFKVFRSI--VDNGGVIKAINVKGYSDIPRRDLDDLVDYVGRYGAKGMVWMGF 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D  G +     V K L       I    + ++GD    IA  P        + R  +A
Sbjct: 365 QKD--GKLKCQ--VTKFLGEEKVREIGKFCEAEEGDLLLLIADKPKIVAHALGELRLEMA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   +IN N F F W+ DFP +E+NE+EK+    H+PFT P+         D   + A  
Sbjct: 421 RRRNLINENEFCFRWVTDFPMFEYNEDEKRYVAEHHPFTAPRDEDIQYLKTDPSKVYAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R +  E+  Q F  +G+S E  E RFG L  AFQ G PP  GIA 
Sbjct: 481 YDMVLNGTEIGGGSLRIYQPELQKQVFEAIGLSDEEAEERFGFLLEAFQYGAPPELGIAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR+VML+L  K++R+V  FP +Q+  D L  +PS VS +QLREL ++
Sbjct: 541 GLDRLVMLMLKCKSIRDVIAFPKTQSAIDPLTQAPSGVSDKQLRELHIK 589


>gi|216263666|ref|ZP_03435661.1| aspartyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215980510|gb|EEC21331.1| aspartyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 586

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 228/591 (38%), Positives = 349/591 (59%), Gaps = 12/591 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++   C +L    +   V ++ WV ++R HG   FLDIRD Y   QV+   +    +I +
Sbjct: 2   FKVIKCNELNEKLINKKVEINAWVKKIRHHGKFTFLDIRDRYEKAQVLIT-EEHLLKIVE 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + I GL++ R +  INAN+ TG  E+ A+ IEI+S   ELP  +  +    E+
Sbjct: 61  KIKLEYCIKIQGLLIKRPSNMINANMTTGYFEILAKNIEIISKCNELPFMIEDDNNASEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + KYR+LDLRRD+L   I+ R +  + +R  ++   F+E  TP    S+PEGARDF++P
Sbjct: 121 SKLKYRYLDLRRDSLKNKIILRCQATHLIRNFLVKRKFLELETPTFVKSTPEGARDFVIP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++++I   +EN+L  +F+   N   +   F +I Y  A+ +YG+DKPD R  + + +++
Sbjct: 240 VKKENIFKLIENMLFSIFKNCLNI-KLPKKFKKITYKMAMNKYGSDKPDTRFELTLQDIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
            +  +SEF VF  IL+     +   +  K    +RA  + + E A+     GL   F ++
Sbjct: 299 RNLKNSEFNVFKDILNNKGSIKTLIVKDKADTFSRAKINNLEEIAKLYKTQGLY--FTKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422
           +   N    G +AK L     + I+    +++ D  FFIA +  +  C      R  IA 
Sbjct: 357 E---NNKFSGGIAKFLKTEEQQLIKA-YSLENNDIIFFIANNKWEIACKAMGQIRIKIAN 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481
           +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+   + +L+ N   +I    
Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYIPAHHMFSIPKKRYISNLEKNPNKAIGEI- 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ I 
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIA 582


>gi|322807355|emb|CBZ04929.1| aspartyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 593

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/595 (41%), Positives = 359/595 (60%), Gaps = 18/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+   +++G  V + GWV R R  GG+IF+D+RD  GI Q+V   +     FE +
Sbjct: 10  RTIMCGESRENNIGQKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEKS 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +V+SE+ + + G ++ R  ++ N ++ TG +EL  + I+ILS +E  P+ +    +  E
Sbjct: 70  DNVKSEYCIAVTGEIVKR--QSPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDASE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR  + K  + R +    +R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 128 NIRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE+DD++   E +L  VF+E   G  V     R+ Y  A+ +YG+DKPDLR  + ++++
Sbjct: 247 FVEEDDVIELNERLLTKVFKEVG-GIDVKLPIERMPYKIAMEKYGSDKPDLRFGMEINDL 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           TE   +SEF+VF    ++  G  V AI A+      R   D++ ++ ++    GLA+I +
Sbjct: 306 TEAVKNSEFKVFKG--AIEAGGSVRAIKAENCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           + DE  +     P+AK L     +AI  ++D + GD    +A  + + F S  A  R HI
Sbjct: 364 KEDEIKS-----PIAKFLTEEEMKAILEKMDAKAGDLILIVADKNNVVFESLGA-LRLHI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL IIN N F F WI +FP   +NEEE +    H+PFT        L   +   ++A 
Sbjct: 418 AKELDIINKNEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIELLDTEPGKVRAK 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H S++  + FS +G +KE    RFG L  AF+ G PPHGG+A
Sbjct: 478 AYDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGLA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR++M L G +N+++V  FP +QN FC  L  +P+ V   QL ELG++ +E 
Sbjct: 538 YGLDRMIMFLAGTENIKDVITFPKNQNAFCP-LTEAPNVVDENQLEELGIKKIEK 591


>gi|148359007|ref|YP_001250214.1| hypothetical protein LPC_0892 [Legionella pneumophila str. Corby]
 gi|166225353|sp|A5IBW8|SYD_LEGPC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148280780|gb|ABQ54868.1| hypothetical protein LPC_0892 [Legionella pneumophila str. Corby]
          Length = 593

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/591 (39%), Positives = 346/591 (58%), Gaps = 8/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH C  +    +   + + GWVH  R HGG+IFLDIRD  G+ QVV  P++   F IA+
Sbjct: 2   RTHYCSAVNELSLDKQITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+V+ + G+V  R    IN  + TG++E+   ++EIL+ +   P      +   E 
Sbjct: 62  KLRSEFVVRVTGIVRKRPEGMINDKMETGRVEVIGTQLEILNQSPTPPFLPDDHQIINED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R+KYR++DLRR  + K +  R ++ + +R  +  +NF++  TP+LT ++PEGARD+LVP
Sbjct: 122 LRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF QLD+EM+F
Sbjct: 182 SRVHPGQFYALPQSPQLFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DIL  +E +L+ VF+E  N  T+ +   R+ Y +A+ RYG+DKPDLRNP+ + ++ 
Sbjct: 241 INEEDILQLIEGLLKIVFKEILN-ITLPDKLPRMSYKEAMTRYGSDKPDLRNPLELIDIA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F VFS   + N G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 300 DLVKDCDFNVFSSAANDNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVN- 358

Query: 364 DESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           D S  +AG+  P+ K L+    ++I  R++ Q GD  FF A             RN +  
Sbjct: 359 DLSAGMAGLQSPILKFLSETAVQSILNRVEAQTGDVIFFGADKAHVVNESMGALRNKLGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +  +IN   ++  W++D+P +E + +  K+   H+PFT PQ    E+L+     ++ A  
Sbjct: 419 DRNLINSG-WQLLWVVDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTL-AKA 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+EI  G IR H  E+    F  +GI  +    +FG L  A Q G PPHGGIA 
Sbjct: 477 YDIVINGYEIGGGSIRIHQPELQKTVFDLIGIGDQEAHEKFGFLLDALQYGAPPHGGIAL 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR+ MLL  + ++R+V  FP +Q     L  +PS     QL ELG+R+ 
Sbjct: 537 GIDRLAMLLTDSTSIRDVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLA 587


>gi|325068855|ref|ZP_08127528.1| aspartyl-tRNA synthetase [Actinomyces oris K20]
          Length = 599

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 245/599 (40%), Positives = 340/599 (56%), Gaps = 32/599 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT + G L  SD+G  V L+GWV R R HGG+ F+D+RD  GI QVV        EIA  
Sbjct: 3   RTRTAGSLRASDIGQVVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVIRE-----EIAHD 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----Y 120
           +R+E+VL + G V +R     N N+ TG+IE+    +EIL+ +  LP  V    E     
Sbjct: 58  LRAEYVLAVTGEVSARPEGNANPNLPTGEIEVVVSDVEILNASAPLPFQVSDHAEDAGQV 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR+LDLRR  +   I  R ++  + R  + + +F+E  TP LT S+PEGARDF
Sbjct: 118 GEEARLRYRYLDLRRSAMQHAIRLRAKVSQAARRVLDSHDFVEIETPTLTRSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 178 LVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD++   E+VLR V+     G  +     R+ Y DA+ +YG+DKPDLR    + 
Sbjct: 237 MSFVEQDDVIAVAEDVLREVWALI--GYELPTPIARMTYHDAMEKYGSDKPDLRFGCELV 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T++F  + FRVF      NP      +P       R F D   EWA+ +G  GLAY+ 
Sbjct: 295 DLTDYFKDTTFRVFQ-----NPYVGAVVMPGGASQSRRTF-DAWQEWAKQRGAKGLAYV- 347

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +   GPVAK++     E +        GD  FF AG      +    AR  I
Sbjct: 348 -TVAEDGTLG--GPVAKNITDAEREGLAQAAGAAPGDCIFFAAGPVDSSRALLGAARLEI 404

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLK 470
            +  G+I+ N + F W++D P ++ + E K   D A         H+ FT P+       
Sbjct: 405 GKRCGLIDDNEWSFVWVVDAPLFKPSAEAKADGDVALGKSAWTAVHHAFTSPKPECLETF 464

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  S  A+ YD+VCNG EI  G IR H S+V  + F+ +GI ++  + +FG L  AF+
Sbjct: 465 DTDPASALAYAYDIVCNGNEIGGGSIRIHRSDVQERVFNVMGIGEQEAQEKFGFLLDAFK 524

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            G PPHGGIA G DRIV LL  A ++R+V  FP S    D L  +P+ ++ EQ +E G+
Sbjct: 525 FGAPPHGGIAFGWDRIVSLLTKADSIRDVIAFPKSGGGFDPLTEAPAPITPEQRKEAGV 583


>gi|325662327|ref|ZP_08150936.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325471329|gb|EGC74552.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 596

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/593 (40%), Positives = 354/593 (59%), Gaps = 13/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           R+H C +L  +++G  V + GWV + R  GGI+F+D+RD  G+ Q++    + D A FE 
Sbjct: 10  RSHRCAELSKANIGETVTVMGWVQKNRNKGGIVFVDLRDRSGLLQIIFENGSIDEAGFEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+V+ + G V +RS   +N N+ TG+IE+ A++I ILS +E  P P+    +  
Sbjct: 70  AGKLRSEFVIAVVGTVEARSG-AVNENLATGEIEIRAREIRILSESETPPFPIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYRFLDLRR  L +N++ R++     R  +  E F+E  TP+L  S+PEGARD+L
Sbjct: 129 EELRLKYRFLDLRRPDLQRNLMMRSKAATLTRQFLAEEGFLEIETPMLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G+FYALPQ+PQ +KQLLM SG+DRYFQI  CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGNFYALPQSPQIFKQLLMCSGYDRYFQIVKCFRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L  +F+E   G  VS    R+ + +A+ R+G+DKPD+R  + + +
Sbjct: 248 SFVDVDDVIDVNERLLAKLFKEIL-GVEVSLPIPRMTWQEAMDRFGSDKPDIRFGMELVD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V+E     EF VF   L    G  V  I AKG G   R   D++ ++A+  G  GLAYI 
Sbjct: 307 VSEVVKDCEFVVFKNAL--ENGGSVRGINAKGQGAMPRKKIDKLVDFAKDFGAKGLAYI- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G V      AK ++     A+   +  ++GD   F A           + R  I
Sbjct: 364 -AIQEDGTVK--SSFAKFMSEEEMHALIEAMGGENGDLLLFAADKNKVVWDVLGNLRLEI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L I++   + F W+ +FP  EWNEE  +    H+PFTMP      L   D   ++A 
Sbjct: 421 ARQLEILDKGDYRFLWVTEFPLLEWNEEAGRYTAMHHPFTMPMEEDLDLLDTDPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R    E+  + F  +G ++E  E +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTELGGGSVRIFNQEIQNKMFEVLGFTREQAEEQFGFLLSAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR++ML+    ++R+V  FP  ++  DL+  +P+ V  +QL ELGL I +
Sbjct: 541 YGLDRLIMLMAKEDSIRDVIAFPKVKDASDLMTEAPAAVDRKQLEELGLEIAK 593


>gi|255975492|ref|ZP_05426078.1| aspartyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256619444|ref|ZP_05476290.1| aspartyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256762899|ref|ZP_05503479.1| aspartyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|257079350|ref|ZP_05573711.1| aspartyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257082210|ref|ZP_05576571.1| aspartyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257087175|ref|ZP_05581536.1| aspartyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|294779748|ref|ZP_06745135.1| aspartate--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307268143|ref|ZP_07549530.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307275909|ref|ZP_07557042.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307277692|ref|ZP_07558778.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307287885|ref|ZP_07567918.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|312900883|ref|ZP_07760177.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|255968364|gb|EET98986.1| aspartyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256598971|gb|EEU18147.1| aspartyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256684150|gb|EEU23845.1| aspartyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256987380|gb|EEU74682.1| aspartyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256990240|gb|EEU77542.1| aspartyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256995205|gb|EEU82507.1| aspartyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|294453122|gb|EFG21537.1| aspartate--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|295113235|emb|CBL31872.1| aspartyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|306501030|gb|EFM70337.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306505571|gb|EFM74755.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306507239|gb|EFM76376.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306515533|gb|EFM84061.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|311291982|gb|EFQ70538.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315025975|gb|EFT37907.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315033287|gb|EFT45219.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315143400|gb|EFT87416.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315149219|gb|EFT93235.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315161366|gb|EFU05383.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315163663|gb|EFU07680.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315167505|gb|EFU11522.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|323481106|gb|ADX80545.1| aspartyl-tRNA synthetase [Enterococcus faecalis 62]
 gi|327535485|gb|AEA94319.1| aspartate--tRNA ligase [Enterococcus faecalis OG1RF]
 gi|329568728|gb|EGG50528.1| aspartate--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 589

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/592 (40%), Positives = 350/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+ +   +EIA
Sbjct: 4   RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    +
Sbjct: 64  DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    EN+L  V +E + G  +S  F R+ YD+A+ RYG+DKPD R  + + +V
Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMSYDEAMARYGSDKPDTRFAMELIDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            +     +F+VF   L  N G+ V A+ AKG     +R   D + ++    G  GLA++ 
Sbjct: 302 ADVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK L  V+ E I    + + GD   F A  P    +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+    +    D  S+ A 
Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA
Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|254492251|ref|ZP_05105425.1| aspartyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224462576|gb|EEF78851.1| aspartyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 595

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/593 (38%), Positives = 357/593 (60%), Gaps = 6/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           R+H CG++  +  G  V + GW+HR R HGG+IF+D+RD  G+ QVV NP D+  F  A+
Sbjct: 2   RSHYCGEVNETLEGKSVTVVGWMHRRRDHGGVIFIDLRDRDGLVQVVCNPEDAESFTTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL I+G V  R A + N ++ +G+IE+ A+K+EIL+ AE  P P+    +  E 
Sbjct: 62  RVRSEYVLKIEGNVQLRPAGSDNPDLKSGKIEIIAKKLEILNSAETPPFPLNELLDVSED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR ++R++DLRR  + + +  R++I   +R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 IRLRHRYIDLRRPEMQQRLRFRSQITRQLRNYLDDHGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM SGFDRY+Q+  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHPGEFFALPQSPQLFKQLLMMSGFDRYYQVVRCFRDEDLRADRQP-EFTQVDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++++ ++ ME ++R +F        + N F R+ Y +A +RYG+DKPDLR P+ + +V+
Sbjct: 241 VDEEEFMSLMEEMIRSLFANVLE-QPLPNPFPRMTYAEAQQRYGSDKPDLRIPLELVDVS 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  V A+   GG   +R   D   ++    G  GLAYI   
Sbjct: 300 DLMQAVDFKVFSGPANDERG-RVAALRVPGGNSLSRKEIDDYTKYVGIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+ K L     EAI  R+  + GD  FF A             R  + Q
Sbjct: 359 DLAAGRDGLQSPILKFLPDDVVEAIMQRVGAETGDLVFFGADKTSVVNESLGALRVKVGQ 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L ++  + +   W+++FP +EW+++ ++    H+PFT P+     L   D     +  Y
Sbjct: 419 DLDMVE-HGWRPLWVVEFPMFEWDDKSERWHALHHPFTAPRESDVGLLETDPEKCLSRAY 477

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H +E+  +    +GI +E  +++FG L  A + G PPHGG+A G
Sbjct: 478 DMVLNGTELGGGSIRIHQTEIQKKVLELLGIGEEEAQDKFGFLLEALKYGCPPHGGLAFG 537

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           +DR+VML+ G+ ++R+V  FP +Q+   LL  +PS ++ +QL+EL +R+ + P
Sbjct: 538 LDRLVMLMTGSASIRDVMAFPKTQSASCLLTDAPSAIADQQLKELNIRLRKLP 590


>gi|94989454|ref|YP_597555.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94993342|ref|YP_601441.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94542962|gb|ABF33011.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94546850|gb|ABF36897.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 599

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/593 (39%), Positives = 351/593 (59%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++   
Sbjct: 20  RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 79

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++G V +R  +  N  + TG +EL    + IL+ A+  P  +  + E  
Sbjct: 80  AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 137

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 138 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 197

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 198 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 256

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++ +
Sbjct: 257 SFLSEQEIQDIVEGMIATVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 315

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +T      +F+VFS+  +V       AI  KG     +R   D++ E+A+  G  GLA  
Sbjct: 316 LTVTVKGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 367

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W     G +A  GPVAK L  + TE +  +L + + D   F+A D L+  +    A RN
Sbjct: 368 -WVKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 422

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++
Sbjct: 423 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 482

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E+  + F  +G + +    +FG L  A   G PPHGG
Sbjct: 483 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANAQFGFLLEAMDYGFPPHGG 542

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I
Sbjct: 543 LAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 595


>gi|331086130|ref|ZP_08335212.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330406289|gb|EGG85803.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 596

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/593 (40%), Positives = 354/593 (59%), Gaps = 13/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           R+H C +L  +++G  V + GWV + R  GGI+F+D+RD  G+ Q++    + D A FE 
Sbjct: 10  RSHRCAELSKANIGETVTVMGWVQKNRNKGGIVFVDLRDRSGLLQIIFENGSIDEAGFEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+V+ + G V +RS   +N N+ TG+IE+ A++I ILS +E  P P+    +  
Sbjct: 70  AGKLRSEFVIAVVGTVEARSG-AVNENLATGEIEIRAREIRILSESETPPFPIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYRFLDLRR  L +N++ R++     R  +  E F+E  TP+L  S+PEGARD+L
Sbjct: 129 EELRLKYRFLDLRRPDLQRNLMMRSKAATLTRQFLAEEGFLEIETPMLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G+FYALPQ+PQ +KQLLM SG+DRYFQI  CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGNFYALPQSPQIFKQLLMCSGYDRYFQIVKCFRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L  +F+E   G  VS    R+ + +A+ R+G+DKPD+R  + + +
Sbjct: 248 SFVDVDDVIDVNERLLAKLFKEIL-GVEVSLPIPRMTWQEAMDRFGSDKPDIRFGMELVD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V+E     EF VF   L    G  V  I AKG G   R   D++ ++A+  G  GLAYI 
Sbjct: 307 VSEVVKDCEFVVFKNAL--ENGGSVRGINAKGQGAMPRKKIDKLVDFAKDFGAKGLAYI- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G V      AK ++     A+   +  ++GD   F A           + R  I
Sbjct: 364 -AIQEDGTVK--SSFAKFMSEEEMHALIEAMGGENGDLLLFAADKNKVVWDVLGNLRLEI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L I++   + F W+ +FP  EWNEE  +    H+PFTMP      L   D   ++A 
Sbjct: 421 ARQLEILDKGDYRFLWVTEFPLLEWNEEAGRYTAMHHPFTMPMEEDLDLLDTDPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R    E+  + F  +G ++E  E +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTELGGGSVRIFNQEIQNKMFEVLGFTREQAEEQFGFLLSAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR++ML+    ++R+V  FP  ++  DL+  +P+ V  +QL ELGL I +
Sbjct: 541 YGLDRLIMLMAKEDSIRDVIAFPKVKDASDLMTEAPAAVDRKQLEELGLEIAK 593


>gi|160932387|ref|ZP_02079777.1| hypothetical protein CLOLEP_01222 [Clostridium leptum DSM 753]
 gi|156868346|gb|EDO61718.1| hypothetical protein CLOLEP_01222 [Clostridium leptum DSM 753]
          Length = 598

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/593 (40%), Positives = 354/593 (59%), Gaps = 18/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RTH CG+  +SDVG  V + GW  R R  G +IF+D+RD  GI Q+    + D   F  A
Sbjct: 10  RTHYCGEPRLSDVGKEVVVCGWAQRQRDLGQLIFIDLRDRTGIIQLAFDDHTDKEIFGKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR+E+VL   G+V  RS++  N  I TG++E+    + +LS +E  P  +  + +  E
Sbjct: 70  FGVRAEFVLAAKGVVRERSSK--NKEIPTGEVEIEVTDLRVLSKSETPPFEITEDSKVKE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +   I+ R +I+   R       F+E  TPIL  S+PEGARD+LV
Sbjct: 128 ELRLKYRYLDLRRPDVQDKIIARHKIVKIARDYFDQNGFVEVETPILIKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSF+ALPQ+PQ YKQL M +GFDRY QIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 188 PSRVFPGSFFALPQSPQLYKQLTMLAGFDRYMQIARCFRDEDLRADRQP-EFTQIDLEMS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++DI++  E  ++ V++E  +   +   F R+ Y + + R+G+DKPDLR    + N+
Sbjct: 247 FIDEEDIMSMAEGFVKTVYKEVLDVE-IQTPFPRMTYAEGMERFGSDKPDLRFGYELKNL 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE    +EFRVF+   +V+ G  V  I  KGG    R   D++ EW ++ G  GLA+   
Sbjct: 306 TEVLKGTEFRVFAG--AVSAGGSVRGINVKGGACYTRKEIDKLAEWVKAYGAKGLAWT-- 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK--FCSFAADARNH 419
           +L++ G+ +      K L       +R  L+ ++GD  F +A D  +  F +  A  R  
Sbjct: 362 KLNQDGSSS--SSYEKFLKEEEAAGVRSALEAENGDLLFLVASDKPQVVFDTLGA-LRCE 418

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
            A+++GII+ +     WI DFP +E++EEE +    H+PFT P    +E L+ N   +++
Sbjct: 419 CARQMGIIDESRPNLLWITDFPLFEYDEEEGRFVAKHHPFTHPNDEDLEQLETNP-GAVR 477

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G IR +   +  + F  +G ++E  + RFG L  AF+ G PPHGG
Sbjct: 478 ARAYDMVLNGNEVGGGSIRINDPALQQRMFKALGFTQEEAQERFGFLIDAFRYGAPPHGG 537

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR+VML+LG  ++R+V  +P   N  +L+  SP+ V  +QL ELG+ I
Sbjct: 538 MAFGLDRLVMLMLGCDSIRDVIAYPKVANSGELMTASPAPVDQKQLDELGISI 590


>gi|148244522|ref|YP_001219216.1| aspartyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|146326349|dbj|BAF61492.1| aspartyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 584

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/596 (40%), Positives = 359/596 (60%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH CG +  SDVG  + + GWV+R R HGG+IFLDIRD  GI QVV NPD+  F +A++
Sbjct: 3   RTHYCGKINTSDVGQIIEIYGWVNRKRNHGGVIFLDIRDIRGIVQVVINPDNKDFSLAET 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL I GLV++R     N  +++G+IE+ AQ IEIL+ ++  P  +       E I
Sbjct: 63  IRNEFVLKISGLVIARDKGLSNPKLVSGEIEIKAQNIEILNTSKPTPFQI-NAINTSEEI 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLR + + K +  R+R+ + +R  M   +F++  TP LT ++PEGARD+LVPS
Sbjct: 122 RLRYRYLDLRNNAMQKRLHLRSRVTHYIRKFMDKHDFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R + G F+ALPQ+PQ +KQLLM SGF+RY+QI  CFRDED R+DR P EF QLD+E SF+
Sbjct: 182 RTHPGKFFALPQSPQLFKQLLMMSGFERYYQIVKCFRDEDLRADRQP-EFTQLDIETSFM 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +++I+  ME + RG+F+   N + + N F  I Y+DA+ +YG D PD+R PI + ++ +
Sbjct: 241 NENEIMTIMERMTRGLFKSVINVD-LGNKFPTITYEDAMEKYGLDCPDIRIPIQIISIDK 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363
              + +F+VFSK  + N    V A+   GG   +R   D+  ++    G  GLAYI  +L
Sbjct: 300 LMKNVDFKVFSKPAN-NSNSRVAALKISGGASISRKNIDKYTKYVGIYGAKGLAYI--KL 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           +++G  +   P+ K L+   T  I      + GD  FF A           + R  IA++
Sbjct: 357 NKNGPTS---PILKFLDDEITNKIIEITGAKTGDIIFFGADKTKIVNESLGNLREKIAKD 413

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ-- 481
           L + +   +   W++DFP +  N +   ++  H+PFT P    E+LK     +  AF   
Sbjct: 414 LNLFDTQ-WAPIWVVDFPMFGIN-DNGSLNATHHPFTAPIVDKETLKQT---AKTAFSRA 468

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  E+       +GIS +  +++FG L  A + G PPHGG+A 
Sbjct: 469 YDLVINGSEIGGGSIRIHQVEMQKTVLKLLGISNQEAQDKFGFLLDALEYGCPPHGGMAF 528

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VM++ G  N+R+V  FP +Q    LL  +P+ V  + LREL ++I   PKK
Sbjct: 529 GLDRLVMIMTGTDNIRDVIAFPKTQTATCLLTDAPANVPKKLLRELNVKI-SLPKK 583


>gi|94272028|ref|ZP_01292054.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [delta
           proteobacterium MLMS-1]
 gi|93450263|gb|EAT01532.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [delta
           proteobacterium MLMS-1]
          Length = 595

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/589 (39%), Positives = 349/589 (59%), Gaps = 11/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H C  LG   +G  V L GWV R R HGG+IF+D+RD  GITQ+V NP+        A
Sbjct: 9   RSHHCNILGREQIGEQVTLMGWVLRRRDHGGVIFIDLRDRRGITQIVFNPEINPEVHTKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++R EWV+ + G V  R A   N  + TG IE+   ++ IL+ ++  P P+  E E  +
Sbjct: 69  HTLRPEWVVAVRGRVQQRPAGMENPKLTTGAIEVMIDELRILNRSQTPPFPLDEEIEVAD 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR T+  N+V R +   ++R  +  E+F+E  TP+LT S+PEGARD+LV
Sbjct: 129 QLRLKYRYLDLRRPTMAANLVLRHQASQAIRNFLNDEDFLEIETPVLTRSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G F+ALPQ+PQ +KQLLM +G +RY+QI  CFRDED R+DR P EF Q+D E+S
Sbjct: 189 PSRVNPGRFFALPQSPQLFKQLLMVAGMERYYQIVRCFRDEDLRADRQP-EFTQVDFELS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ ++   E +++ +F+  + G  ++  F R+ Y +A+ R+GTD+PDLR  + +  +
Sbjct: 248 FVDEEGVMAVAEGMMKNLFKA-TLGRELAPPFPRMTYAEALARFGTDRPDLRFGLELVEI 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T    +   +VF  +  V  G  V +I AKG    +R   D +  +A   G  GLA++  
Sbjct: 307 THVVKNCGLQVFRDV--VENGGMVKSINAKGCAYFSRKDLDDLTAYAGEFGAKGLAWV-- 362

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++ E G      P+AK       +A+   L  Q  D  FF+A  P       A+ R  +A
Sbjct: 363 KIKEDGQ--WQSPIAKFFTAEEQQAMVEALAAQPADLLFFVADQPTVVHQALAELRLELA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L +++   F F W+ DFP  E++ E K+    H+PFT P+     L  +D   +++  
Sbjct: 421 RRLELVSREDFSFVWVTDFPLLEYDAEAKRHAAVHHPFTAPREEDLPLLDSDPGRVRSRA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  ++  Q F+ +GI+ E V+++F  L +A + G PPHGG+A 
Sbjct: 481 YDLVLNGNEIGGGSIRIHQPDLQRQVFTALGITPEEVKDKFAFLVQALELGAPPHGGMAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR++MLL G  ++R+V  FP +Q     L  +P+ V+ +QL EL LR
Sbjct: 541 GLDRLLMLLAGCDSIRDVIAFPKTQKATCPLTEAPAPVARKQLTELSLR 589


>gi|323485941|ref|ZP_08091275.1| hypothetical protein HMPREF9474_03026 [Clostridium symbiosum
           WAL-14163]
 gi|323400755|gb|EGA93119.1| hypothetical protein HMPREF9474_03026 [Clostridium symbiosum
           WAL-14163]
          Length = 598

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/597 (38%), Positives = 355/597 (59%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           R+H C +L  +++G  V + GWV + R  GGIIF+D+RD  GI Q++   ++  +  F  
Sbjct: 10  RSHRCTELSTANIGETVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEESDCGAGSFAK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ + G V +RS   +N N+ TG+IE+ A  + +L+ AE  P P+       
Sbjct: 70  AERLRSEFVVAVTGKVEARSG-AVNENLKTGEIEIRANSLRVLAEAETPPFPIEENSRTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L +N++ R+R+    R  +  E F+E  TP L  S+PEGARD+L
Sbjct: 129 EELRLKYRYLDLRRPDLQRNLMIRSRVAILTRKFLAEEGFLEIETPTLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ  KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGEFYALPQSPQLLKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ +D+L+  E +L+ +F+E  + + +     R+ + +A+ R+G+DKPDLR  + + N
Sbjct: 248 SFVDVEDVLDVNERLLKTLFKEICDYD-LQLPIQRMTWREAMERFGSDKPDLRFGMELKN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V++     +F VF   L    G  V  I A+G G   R   D + E+A+  G  GLAY+ 
Sbjct: 307 VSDTVKDCQFVVFKGAL--ENGGSVRGINAEGQGAMPRKKIDALVEYAKGFGAKGLAYLA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D S   +     AK +     EA+   +D + GD   F A           + R  +
Sbjct: 365 IQEDGSYKSS----FAKFMTEEELEALVRAMDGKPGDLLLFAADKDKVVFDVLGNLRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L ++  + F F W+ +FP +E++EE+ +    H+PFTMP      L   D  +++A 
Sbjct: 421 ARQLDLLKKDDFRFLWVTEFPLFEYSEEDGRYVAVHHPFTMPMEEDLPLIDTDPGAVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H ++V  +    +G + E    +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTEMGGGSVRIHQADVQSKMLEVLGFTAERANEQFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G DR+VML++GA ++R+V  FP  ++   L+M +P+ V V+QL EL + +    +K
Sbjct: 541 YGFDRMVMLMVGADSIRDVIAFPKVKDASCLMMEAPAAVDVKQLEELSIAVAVAAEK 597


>gi|315169379|gb|EFU13396.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1342]
          Length = 589

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/592 (40%), Positives = 349/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+ +   +EIA
Sbjct: 4   RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    +
Sbjct: 64  DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    EN+L  V +E + G  +S  F R+ YD+A+ RYG+DKPD R  + + +V
Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMSYDEAMARYGSDKPDTRFAMELIDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            +     +F+VF   L  N G+ V A+ AKG     +R   D + ++    G  GLA++ 
Sbjct: 302 ADVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK L  V+ E I    + + GD   F A  P    +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I  + F F WI+D+P +E++EE  +   AH+PFT P+    +    D  S+ A 
Sbjct: 414 GKELGLIEESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA
Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|310829068|ref|YP_003961425.1| aspartyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308740802|gb|ADO38462.1| aspartyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 591

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/594 (38%), Positives = 344/594 (57%), Gaps = 13/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           YR   CG+L    VG  V+L GW    R  GG++F+D+RD  G  Q+V N +  +  F  
Sbjct: 5   YRNALCGELNTEFVGQTVKLCGWTDTRRNLGGVLFIDLRDRSGKVQLVVNEEVSANAFAE 64

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VLCI+G V++R AE +N  + TG+IE+  + + IL  A+  P+ V  + +  
Sbjct: 65  AEKVRNEYVLCIEGEVVNRDAENVNPKMATGEIEVMVKSLTILDTADTPPIYVEDDDKSN 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLR+    K +  R ++ +  R  +  E F+E  TPIL   +PEGARDFL
Sbjct: 125 EAVRLKYRYLDLRKPKNQKMLKTRAQVASIARNFLNDEGFLEIETPILGKPTPEGARDFL 184

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV +G F+ LPQ+PQ +KQ+LM SG DRY+Q+A CFRDED R DR P EF Q+DMEM
Sbjct: 185 VPSRVQKGKFFGLPQSPQLFKQILMISGVDRYYQVAKCFRDEDLRQDRQP-EFTQIDMEM 243

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ +DDIL  MEN++  +F E   G  +   F+R+ Y +A+ R+G+DKPD R  + + N
Sbjct: 244 SFITKDDILPIMENMIAKIFREV-RGIELETPFIRMTYQEAMDRFGSDKPDTRFGMELTN 302

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +++   +SEF+VFS   +V  G  V AI AK   G  ++     + ++A      GLA+I
Sbjct: 303 ISDIVENSEFKVFSG--AVKKGGSVRAINAKDAQGRLSKKTIKNLEKFAAIYKAKGLAWI 360

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                +  +     P+ K ++     AI  R+D + GD  F +A      C+     R  
Sbjct: 361 -----DVSDGEMKSPILKFISEEEKNAIFERMDAEPGDMIFIVADTDEIVCTALGQLRLE 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A++L       F F W++DFP  E++ E  +    H+PFT P      L   D   + A
Sbjct: 416 LAKKLEFDLSGKFNFLWVIDFPLLEYDAEAGRYVAKHHPFTAPLDKDLPLLETDPSQVHA 475

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H  +V  + F  +G + E    +FG L  A + G PPHGG+
Sbjct: 476 DAYDMVVNGVELGGGSIRIHNQDVQEKMFKALGFTMEDAWKQFGFLLEALKYGTPPHGGL 535

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DR++M+L+   N+R+V  FP +QN   L+  +P+   ++QL +LG+ I E
Sbjct: 536 AFGLDRLIMMLMDIDNIRDVIAFPKTQNHSCLMTDAPAEAQLDQLIDLGISIDE 589


>gi|153938160|ref|YP_001392332.1| aspartyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|170756537|ref|YP_001782689.1| aspartyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|166225340|sp|A7GHS2|SYD_CLOBL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229559868|sp|B1IMD7|SYD_CLOBK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|152934056|gb|ABS39554.1| aspartate--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|169121749|gb|ACA45585.1| aspartyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|295320325|gb|ADG00703.1| aspartate--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 593

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/595 (41%), Positives = 359/595 (60%), Gaps = 18/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+   +++G  V + GWV R R  GG+IF+D+RD  GI Q+V   +     FE +
Sbjct: 10  RTIMCGESRENNIGEKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEKS 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +V+SE+ + + G ++ R  ++ N ++ TG +EL  + I+ILS +E  P+ +    +  E
Sbjct: 70  DNVKSEYCIAVTGEIVKR--QSPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDASE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR  + K  + R +    +R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 128 NIRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE+DD++   E +L  VF+E   G  V     R+ Y  A+ +YG+DKPDLR  + ++++
Sbjct: 247 FVEEDDVIELNERLLAKVFKEVG-GIDVKLPIERMPYKIAMEKYGSDKPDLRFGMEINDL 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           TE   +SEF+VF    ++  G  V AI A+      R   D++ ++ ++    GLA+I +
Sbjct: 306 TEAVKNSEFKVFKG--AIEAGGSVRAIKAENCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           + DE  +     P+AK L     +AI  ++D + GD    +A  + + F S  A  R HI
Sbjct: 364 KEDEIKS-----PIAKFLTEEEMKAILEKMDAKAGDLILIVADKNNVVFESLGA-LRLHI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL IIN N F F WI +FP   +NEEE +    H+PFT        L   +   ++A 
Sbjct: 418 AKELDIINKNEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIELLDTEPGKVRAK 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H S++  + FS +G +KE    RFG L  AF+ G PPHGG+A
Sbjct: 478 AYDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGLA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR++M L G +N+++V  FP +QN FC  L  +P+ V   QL ELG++ +E 
Sbjct: 538 YGLDRMIMFLAGTENIKDVITFPKNQNAFCP-LTEAPNVVDENQLEELGIKKIEK 591


>gi|159037436|ref|YP_001536689.1| aspartyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|189082137|sp|A8LXY1|SYD_SALAI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157916271|gb|ABV97698.1| aspartyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 604

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 236/596 (39%), Positives = 345/596 (57%), Gaps = 16/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  +D G+ V L+GWV R R HGG+IF+D+RD  G+ QVV        E A  
Sbjct: 3   RTHDAGSLRATDAGTTVTLAGWVARRRDHGGVIFVDLRDGSGVAQVVLRE-----EDAHV 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + I G V  R     N  + TG++E++A ++E+LS A  LPLPV  + E  + I
Sbjct: 58  LRNEYCVRITGEVTRRPEGNENPELATGEVEVTADELEVLSEAAPLPLPVDDQIEAGDDI 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR      +  R+R     R  +   +F+E  TP LT S+PEGARDFLVP 
Sbjct: 118 RLRYRYLDLRRSGPANALRLRSRANQIARTVLHERDFLEIETPTLTRSTPEGARDFLVPV 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G++YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 178 RLQPGTWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +DD+++  E ++  ++ + + G+ ++    RI + DA+ RYG+DKPDLR  + +  +T+
Sbjct: 237 TEDDVIDLGEAIVSRLWRQLA-GHQITRPIPRITWHDAMARYGSDKPDLRYGVELTELTD 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +   + FRVF+  +    GY    +   G   +R   D   +WA+++G  GLAY+   LD
Sbjct: 296 YLRGTRFRVFAGAIEAG-GYVGAVVMPGGAAQSRKELDGWQDWAKARGAKGLAYVV--LD 352

Query: 365 -ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS-FAADARNHIAQ 422
            E+G     GPVAK+L+  +   +   +  + GD+ FF AG   +        AR  IA+
Sbjct: 353 AETGEA--RGPVAKNLSAEHLAGLADAVGAKPGDAIFFAAGAESRAAQELLGAARVEIAR 410

Query: 423 ELGIINCNCFEFCWIMDFPFYEW--NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
              +++ + + FCW++D P +E   + EE      H+PFT P                A+
Sbjct: 411 RANLVDESAWAFCWVVDAPMFERVSDSEEGGWTAVHHPFTAPNAEWVDRFEEAPDRALAY 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+VCNG EI  G IR H  +V  + F  +GI+ E   ++FG L  AF+ G PPHGGIA
Sbjct: 471 AYDIVCNGNEIGGGSIRIHRGDVQQRVFDLLGITPEQARDKFGFLLEAFKYGPPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G DRI MLL GA ++REV  FP ++   D L  +P+ ++  Q  E G+     P+
Sbjct: 531 LGWDRICMLLAGADSIREVIAFPKTRGGFDPLTSAPTPITAAQRLEAGVDARPKPE 586


>gi|257084828|ref|ZP_05579189.1| aspartyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257090252|ref|ZP_05584613.1| aspartyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|312902749|ref|ZP_07761953.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|256992858|gb|EEU80160.1| aspartyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256999064|gb|EEU85584.1| aspartyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|310633803|gb|EFQ17086.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315174311|gb|EFU18328.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315576680|gb|EFU88871.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 589

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/592 (40%), Positives = 349/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+ +   +EIA
Sbjct: 4   RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    +
Sbjct: 64  DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    EN+L  V +E + G  +S  F R+ YD+A+ RYG+DKPD R  + + +V
Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMSYDEAMARYGSDKPDTRFAMELIDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            +     +F+VF   L  N G+ V A+ AKG     +R   D + ++    G  GLA++ 
Sbjct: 302 ADVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK L  V+ E I    + + GD   F A  P    +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+         D  S+ A 
Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVDRLATDPASVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA
Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|256961541|ref|ZP_05565712.1| aspartyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|293384699|ref|ZP_06630554.1| aspartate--tRNA ligase [Enterococcus faecalis R712]
 gi|293387399|ref|ZP_06631954.1| aspartate--tRNA ligase [Enterococcus faecalis S613]
 gi|312908315|ref|ZP_07767279.1| aspartyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312910611|ref|ZP_07769453.1| aspartyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|256952037|gb|EEU68669.1| aspartyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|291078006|gb|EFE15370.1| aspartate--tRNA ligase [Enterococcus faecalis R712]
 gi|291083190|gb|EFE20153.1| aspartate--tRNA ligase [Enterococcus faecalis S613]
 gi|310625729|gb|EFQ09012.1| aspartyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311289159|gb|EFQ67715.1| aspartyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
          Length = 589

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/592 (40%), Positives = 350/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+ +   +EIA
Sbjct: 4   RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    +
Sbjct: 64  DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    EN+L  V +E + G  +S  F R+ YD+A+ RYG+DKPD R  + + +V
Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMRYDEAMARYGSDKPDTRFAMELIDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            +     +F+VF   L  N G+ V A+ AKG     +R   D + ++    G  GLA++ 
Sbjct: 302 ADVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK L  V+ E I    + + GD   F A  P    +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+    +    D  S+ A 
Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA
Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|255020118|ref|ZP_05292188.1| Aspartyl-tRNA(Asn) synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254970411|gb|EET27903.1| Aspartyl-tRNA(Asn) synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 596

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/589 (40%), Positives = 342/589 (58%), Gaps = 7/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH   + G   +GS + L GWV R R HGG+IFLD+RD  G+ Q+V +P     F +A+
Sbjct: 2   RTHYSNETGTELIGSEIILCGWVQRRRDHGGVIFLDLRDREGLIQIVVDPSQEEAFALAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL + G + +R A + N +I +G +EL A  IE+L+ +E LP P+  E    E+
Sbjct: 62  QVRSEYVLRVRGPLRARPAGSENPDIASGAVELQAVAIEVLNRSEPLPFPL-DEDGISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  +   +  R ++   +R  +    F++  TPILT S+PEGARD+LVP
Sbjct: 121 LRLKYRYLDLRRPEMAGRLRLRHQVNRYLRRYLDERGFVDVETPILTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR   G F+ALPQ+PQ +KQLLM  G +RY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRTQPGHFFALPQSPQIFKQLLMVGGLERYYQITRCFRDEDLRADRQP-EFTQVDIEASF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++  ++   E ++RG+F E  + + + + F R+ Y +AIRRYG D+PDLRNP+ +  +T
Sbjct: 240 VDEAAVMAIAEPMIRGLFRELLDVD-LGDPFPRMPYAEAIRRYGVDRPDLRNPLELTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF     + P   V  +   GG   +R   D   E+A   G  GLA+I   
Sbjct: 299 DLARTVEFKVFRAAAEL-PQGRVACLRVPGGADLSRTQIDAYTEFAAIYGAKGLAWIKIN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             + G+     P+ K L     + +  R   Q GD  FF A           + RN +A 
Sbjct: 358 ALDGGSEGLQSPIVKFLPETFLQEMLQRSGAQVGDILFFGADRAKIVNETLGNLRNRVAA 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           + G++    +   WI DFP +E++++E +    H+PFT PQ G   L  +      A  Y
Sbjct: 418 DRGLLEGG-WRAVWITDFPMFEYDDQEDRWVSTHHPFTAPQEGSLGLLQSHPEKALARAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG EI  G IR H  EV  Q F+ +GI  E   ++FG L  A   G PPHGG+A G
Sbjct: 477 DLVLNGNEIGGGSIRIHRREVQEQVFAALGIDPEEARDKFGFLLDALSYGAPPHGGLAFG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR+VML+ GA  +R+V  FP +Q    LL  +P+ V+  QLRELG+R+
Sbjct: 537 LDRLVMLMSGADTIRDVIAFPKTQKAGCLLTDAPNRVAERQLRELGIRL 585


>gi|308182777|ref|YP_003926904.1| aspartyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308064962|gb|ADO06854.1| aspartyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 577

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 227/589 (38%), Positives = 348/589 (59%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKSVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLHAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+    G+T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQEIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFIDSSNSIFSNIAQDPKNQRIKALNVKGADALFSRSVLKELEEFVRQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  R D Q GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+    +++  DL  I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECKDLEEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|258593720|emb|CBE70061.1| Aspartyl-tRNA synthetase / asparaginyl-tRNA synthetase
           (Aspartate-/asparagine-tRNA ligase) (AspRS) [NC10
           bacterium 'Dutch sediment']
          Length = 593

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/590 (39%), Positives = 341/590 (57%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG L   DVG  V L GWVHR R HGG++F+D+RD  GITQ V NP+      E+A
Sbjct: 10  RTGHCGLLRSPDVGKSVVLMGWVHRRRDHGGLVFIDLRDREGITQTVFNPEFHPEAHEVA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +R+E+V+ I G V  R   T N  + TG IE+ A++ +IL+ A+    P+  + +  E
Sbjct: 70  RRMRAEFVVAISGRVQLRPPGTENTLLPTGAIEIVAEEAQILNEAKPPVFPIEEQTDVAE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR  YR+LDLRR ++  N+  R ++  +    +    FIE  TP+LT S+PEGARD+LV
Sbjct: 130 EIRLTYRYLDLRRPSMLYNLRLRHKVTQAAHSYLDRHGFIEVETPMLTRSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM +G DRY+QI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRLNPGEFYALPQSPQLFKQLLMVAGIDRYYQIVKCFRDEDLRADRQP-EFTQIDLEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++DD+L   E ++  +FE  +  +++   F R+ Y +AI R+G D PD R  + + ++
Sbjct: 249 FVDRDDVLEVTEGLVVALFEA-AGKSSLPRPFPRLTYAEAIDRFGLDTPDTRFGMELADL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE     E + F++   +  G  V  +  KG G  +R   D + ++A+  G  GLA+  +
Sbjct: 308 TELLCGVEAKAFAE--PIAQGGVVRGMNVKGCGAFSRTQIDGLVDYAKGVGAKGLAW--F 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++   G      P+AK L  +  E +  RL  ++GD    +A             R  + 
Sbjct: 364 KVSADGL---QSPLAKFLGPIILERLAERLKGEEGDLLLLVADQAKTAAETLGRLRVKLG 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            EL +I+ +     W++DFP  E++ E+ +    H+PFT P      L   D   I+A  
Sbjct: 421 HELKLIDESALAVTWVIDFPLLEYDREQGRWQAMHHPFTAPMDEDLPLFDTDPGRIRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR H  +V  + F+ +GI  E    +FG L  A + G PPHGG+A 
Sbjct: 481 YDLVVNGQELGGGSIRIHRRDVQSRMFAALGIGAEEARAKFGFLMDALEYGAPPHGGLAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR++ LL GA ++R+V  FP +Q   DL+  +PS V   QLREL +++
Sbjct: 541 GFDRVIALLAGAASIRDVIAFPKTQKAVDLMTQAPSPVDARQLRELSIKL 590


>gi|326201904|ref|ZP_08191774.1| aspartyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325987699|gb|EGD48525.1| aspartyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 593

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/589 (39%), Positives = 348/589 (59%), Gaps = 10/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63
           R+H C +L  S++G  V + GWV + R  G ++F+D+RD  GI Q+V  + D   F+ AK
Sbjct: 10  RSHKCTELSSSNIGEKVTVMGWVQKQRNLGSLVFIDLRDRTGIVQLVFTDKDGEMFDKAK 69

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+V+   G V +RS E +N  + TG+IE+ A ++ +LS +E  P+ +    E  E 
Sbjct: 70  TIRSEFVIATVGTVAARSPEAVNKKMATGEIEIIASELRVLSTSETPPMYIEENSEVNEQ 129

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYRFLDLRR  + +N++ R R+    R       F+E  TPIL  S+PEGARD+LVP
Sbjct: 130 TRLKYRFLDLRRPDMQRNLILRHRVAKVARDYYDENAFLEIETPILIKSTPEGARDYLVP 189

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM SG+DRYFQIA CFRDED R+DR P EF Q+D+EMSF
Sbjct: 190 SRVHPGKFFALPQSPQLYKQILMVSGYDRYFQIAKCFRDEDLRADRQP-EFTQIDIEMSF 248

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V  DD+L   E  ++  F+E  N + V   FLR+ Y +A+ R+G+DKPD+R  + + N++
Sbjct: 249 VNVDDVLEVNEGFVKKAFKEALNID-VETPFLRMPYAEAMERFGSDKPDIRFGMELINMS 307

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   +  F+VF+  +++  G  V AI AKG    +R   D + E  ++    G+A+I   
Sbjct: 308 DMVANCGFKVFTDAVAM--GGSVRAINAKGCAKFSRKEIDALVEVVKTYKAKGMAWI--S 363

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           +     +      AK ++    ++I  R   + GD   F+A             R  IA+
Sbjct: 364 ISPENEIK--SSFAKFMSEDEMKSILDRAQAEPGDLICFVADKNNVVFDALGQLRLEIAR 421

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L I+N + F+F W+ +FP +E++E+E++    H+PFT P          D   ++A  Y
Sbjct: 422 KLDILNPDEFKFLWVTEFPLFEYDEDEQRWAAKHHPFTSPMDEDLEYLDTDPGRVRAKAY 481

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H+ E+  + F  +G S+E    +FG L  AF+ G PPHGG+A G
Sbjct: 482 DMVLNGVELGGGSIRIHIQELQAKMFKMLGFSEEDANRKFGFLLEAFKYGTPPHGGMAFG 541

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR+VML+    ++R+V  FP  QN   L+  +P  V  +Q+ EL + I
Sbjct: 542 LDRLVMLMAKKNSIRDVIAFPKVQNASCLMSNAPDVVDEKQIEELHINI 590


>gi|158320738|ref|YP_001513245.1| aspartyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158140937|gb|ABW19249.1| aspartyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 588

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/595 (38%), Positives = 354/595 (59%), Gaps = 15/595 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--C 58
           M+  RTH CG+L   ++G  V LSGWV + R  GG+IF+D+RD  GI Q+V +   +   
Sbjct: 1   MNLKRTHMCGNLNKDNIGEIVTLSGWVQKRRDLGGLIFVDLRDRSGIMQMVFDNKVSEDA 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F+ A+ + SE+V+ + G +  R  E+ N N+ TG IE+ A  IEIL+ ++  P+ +  + 
Sbjct: 61  FKEAEKLGSEYVITVKGKIYER--ESKNPNMPTGDIEVFADDIEILNQSQTPPIYIKDDD 118

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E++R KYR+LDLR+  + KN++ R ++   +R  +  E F+E  TP+LT ++PEGAR
Sbjct: 119 DVSENLRLKYRYLDLRKSKMQKNLILRHKVAQIVRNFLSNEGFLEIETPMLTKTTPEGAR 178

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G F+ALPQ+PQ +KQLLM SG +RYFQI  CFRDED R+DR P EF Q+D
Sbjct: 179 DYLVPSRVNPGKFFALPQSPQMFKQLLMVSGMERYFQIVKCFRDEDLRADRQP-EFTQID 237

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            EMSFV  +D++   E +L+ VF+E  N + ++  F R+ Y++A+ R+G+DKPD R    
Sbjct: 238 CEMSFVNAEDVMAINEKLLQTVFKEALNID-IALPFDRLTYEEAMERFGSDKPDTRFGFE 296

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356
           + ++ E      F+VF+   ++  G  V AI  KG G   +R    ++ ++ ++ G  GL
Sbjct: 297 LVDLGEVIKDCGFKVFTS--AIESGGAVKAINVKGHGDQFSRKDITKLEDYVKNYGAKGL 354

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A++  ++ E G  +   P+AK        A+    + + GD   F+A             
Sbjct: 355 AWL--KITEEGVTS---PIAKFFTEEEMAAVLKTTNAEQGDLVLFVADKKQVVYDALGHL 409

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +A+ L +++ + F+  W+ +FP +E++EEE++    H+PFT P      L   +   
Sbjct: 410 RVEVAKILNMLDKDEFKLLWVTEFPLFEYDEEEQRYAAKHHPFTSPMDEDIELMVTNPEK 469

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
            +A  YD+V NG+EI  G IR H SE+  + F  +G S+E    +FG L  AF+ G PPH
Sbjct: 470 ARAKAYDIVLNGYEIGGGSIRIHSSELQQKMFKALGFSEEEAWEKFGFLLEAFKYGTPPH 529

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GGIA G+DR+VMLL    N+R+V  FP +QN    L  +P+     QL EL +R+
Sbjct: 530 GGIAFGLDRLVMLLTKEDNIRQVIAFPKTQNATCPLTNAPTFADERQLDELSVRV 584


>gi|217969591|ref|YP_002354825.1| aspartyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217506918|gb|ACK53929.1| aspartyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 599

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/591 (40%), Positives = 348/591 (58%), Gaps = 10/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG +  +D+   V + GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F+ A+
Sbjct: 2   RTHYCGKVTAADLDQIVTICGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+VL + G V  R A T NAN+++G+IE+    IE+L+ A   P  +  E    E+
Sbjct: 62  SVRNEFVLKLSGKVRRRPAGTENANLVSGEIEILCHDIEVLNAAATPPFQLDDE-NLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + KN++ R +   + R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPQMQKNLMLRYKTTMAFRRFLDGAGFIDVETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +G+DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGQFFALPQSPQLFKQLLMVAGYDRYYQIVKCFRDEDLRADRQP-EFTQVDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I   +E ++R VF+E +    +   F R+ Y +A+RRYG+DKPDLR  + + +VT
Sbjct: 240 MNEHEITALVEEMIRYVFKE-AMAVELPAPFPRMTYAEAMRRYGSDKPDLRVTLELTDVT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +      F+VFS       G  V A+   GG    R   D   ++    G  GLAYI   
Sbjct: 299 DAVQDVAFKVFSG--PATSGGRVAAMRVPGGNSLTRGEIDEYTKFVAIYGARGLAYIKVN 356

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                N  G+  P+ K+L+      I  R   Q GD  FF A D  K  + A  A R  +
Sbjct: 357 DVTQPNEHGLQSPIVKNLHETALRTILERTGAQSGDLIFFGA-DKTKVVNDAMGALRIKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             E G +    +   W++DFP +E++E++K+    H+PFT P+     L  ++     A 
Sbjct: 416 GHEKGYVTGEAWRPLWVVDFPMFEYDEDDKRWTACHHPFTSPKDEHIDLLESNPGECLAK 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDL  NG+EI  G +R H ++V  + F  + I  E  + +FG L  A + G PPHGG+A
Sbjct: 476 AYDLALNGWEIGGGSVRIHRADVQARVFEALNIGPEEQQAKFGFLLDALKYGAPPHGGLA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+
Sbjct: 536 FGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTDAPSGVDEKQLRELHIRL 586


>gi|42524682|ref|NP_970062.1| hypothetical protein Bd3311 [Bdellovibrio bacteriovorus HD100]
 gi|62287568|sp|Q6MI59|SYD_BDEBA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|39576892|emb|CAE78121.1| aspS [Bdellovibrio bacteriovorus HD100]
          Length = 642

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/601 (39%), Positives = 357/601 (59%), Gaps = 15/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH CG LGVS  G  V L GWV   R HG ++F+D+RD  GI QVV +P+ A    +K+
Sbjct: 47  RTHYCGSLGVSQAGQKVVLMGWVDVRRDHGSLVFIDLRDREGIVQVVLDPNKAETASSKN 106

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R E+VL ++G+V +R     NA I TG++E+ A + EIL+ +   P  V  +    E +
Sbjct: 107 LRGEFVLAVEGVVRARPDGMKNAKIKTGEVEVEAIRCEILNESAVPPFQV-SDTNVNEML 165

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVP 183
           R KYR+LDLR   L  +++ R ++   +R R +++N F+E  TPIL  S+PEGARD+LVP
Sbjct: 166 RLKYRYLDLRSARLSSHLITRHKVAQLVR-RFLSDNGFLEVETPILYKSTPEGARDYLVP 224

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G FYALPQ+PQ  KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DMEMS+
Sbjct: 225 SRVNPGHFYALPQSPQTLKQLLMISGYDRYFQIARCFRDEDLRADRQP-EFSQIDMEMSY 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++Q+DI+   E +LR +++E    +       R+ Y +A+ RYG DKPD R  + + ++ 
Sbjct: 284 IDQEDIMEMNEKLLRTIWKEIKGIDV--GAIPRMTYQEAMDRYGIDKPDTRFGVEIKDLK 341

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
                S F+VF  +L+        A P KGG  +R   D++ + A+  G  GL +I  + 
Sbjct: 342 SIVTGSGFKVFDDVLARGGIVRGIAAP-KGGSYSRGQLDKLTDMAKRAGAKGLVWI--KS 398

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           +  G ++    V+K  +      +      + GD    +A D    C+  +  R H+ +E
Sbjct: 399 EADGTLS--SSVSKFFSPEKLAEMFKACGGEAGDCALVVADDYDTACAALSTLRLHLGRE 456

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG--GMESLKGNDLLSIK--A 479
           L +I+ + ++F W++DFP  E++ +EK+    H+PFT P+     + +  N+    K  A
Sbjct: 457 LNLIDNSKYKFLWVVDFPLLEYSPDEKRWVARHHPFTSPKDEFAQDLVNNNEAAYGKMLA 516

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLVCNG+E+  G IR + +E+    F  +G+S+E  +++FG    A + G PPHGGI
Sbjct: 517 KAYDLVCNGYEMGGGSIRIYRNEIQQAMFRLLGMSEEETQHKFGFFLEALKYGTPPHGGI 576

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           A G+DR+VMLL     +REV  FP +    DL+   PS V+ +QL E+G+R+    +K L
Sbjct: 577 AWGMDRLVMLLCETDAIREVIAFPKTAKATDLMSDCPSEVNRDQLAEVGVRLSTLAEKHL 636

Query: 600 K 600
           +
Sbjct: 637 E 637


>gi|300784607|ref|YP_003764898.1| aspartyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299794121|gb|ADJ44496.1| aspartyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 591

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/597 (40%), Positives = 341/597 (57%), Gaps = 30/597 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G L     G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +    E A +
Sbjct: 3   RTHNAGTLRAGQAGQTVTLTGWVARRRDHGGVIFIDLRDASGVAQVVFR-EGEMAERAHA 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + I G V  R     NA I TG+IE+ A ++E+LS A  LP P+    +  E I
Sbjct: 62  LRSEFCVKIVGEVAKRPEGNANAEIPTGEIEVLATQLEVLSEAAPLPFPIDDRVDVGEEI 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R K+R+LDLRR      +  R+ +  + R  + A++F+E  TP +T S+PEGARDFLVP+
Sbjct: 122 RLKHRYLDLRRSGPAAAMRLRSEVSRAAREVLHAQDFVEIETPTMTRSTPEGARDFLVPA 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 182 RLKPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E+++  +++    G+ +     RI Y +A+ +YG+DKPDLR  + + ++TE
Sbjct: 241 EQDDVIALGEDIVSALWKLI--GHEIPRPIPRITYHEAMAKYGSDKPDLRFDLEITDMTE 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    + A G    R   D   EWA+ +G  GLAYI   +D
Sbjct: 299 FFADTPFRVFQAP------YVGAVVMAGGADQPRRQLDAWQEWAKQRGARGLAYILVNVD 352

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
             G +   GPVAK+L+    E +      + GD  FF AG           AR+ I + L
Sbjct: 353 --GTLG--GPVAKNLSETERENVAAAAGAKPGDCIFFAAGKAASTQPLLGAARDEIGKRL 408

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE--------EKKIDFAHNPFTMPQ----GGMESLKGN 472
           G+I+ N + F W++D P +   E+          K    H+ FT P        E   GN
Sbjct: 409 GLIDENAWSFVWVVDAPLFAPVEDIGDDVAVGSGKWTAVHHAFTSPTPEWIDKFEQDPGN 468

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            L    A+ YD+VCNG EI  G IR H  +V  + FS +G+ +E  + +FG L  AF  G
Sbjct: 469 AL----AYAYDIVCNGNEIGGGSIRIHRGDVQKRVFSLMGLGEEEAQEKFGFLLDAFAFG 524

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            PPHGGIA G DRIVMLL  A ++R+V  FP +    D L  +P+ ++ +Q +E G+
Sbjct: 525 PPPHGGIAFGWDRIVMLLAKADSLRDVIAFPKTGGGYDPLTAAPAPITAQQRKEAGI 581


>gi|238063887|ref|ZP_04608596.1| aspartyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237885698|gb|EEP74526.1| aspartyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 606

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/592 (40%), Positives = 348/592 (58%), Gaps = 20/592 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  +D G+ V L+GWV R R HGG+IF+D+RD  GI QVV        E A +
Sbjct: 3   RTHDAGSLRATDAGTTVTLAGWVARRRDHGGVIFVDLRDGSGIVQVVFRE-----EDAHA 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  + TG+IE++A  +E+LS A  LPLPV  + E  + I
Sbjct: 58  LRNEFCVKVTGEVTRRPEGNENPELPTGEIEVTASALEVLSEAAPLPLPVDDQVEAGDDI 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR    + +  R+R     R  +   +F+E  TP LT S+PEGARDFLVP 
Sbjct: 118 RLKYRYLDLRRGGPARAMRLRSRANQLARGVLHDRDFLEIETPTLTRSTPEGARDFLVPV 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 178 RLQPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +DD+++  E ++  ++ + + G  +     RI + DA+ RYG+DKPDLR  + +  +T+
Sbjct: 237 TEDDVIDLGEAIVSALWSDLA-GYEIPRPIPRITWHDAMARYGSDKPDLRYGVELTELTD 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + FRVF+   +++ G  V A+   GG G  R   D   +WA+++G  GLAY+   L
Sbjct: 296 YLRGTAFRVFAG--AIDAGGYVGAVVMPGGAGQTRKELDGWQDWAKARGAKGLAYVV--L 351

Query: 364 D-ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS-FAADARNHIA 421
           D E+G  A  GPVAK+L+  +   +   +  + GD+ FF A    +        AR  IA
Sbjct: 352 DAETG--APRGPVAKNLSEEHLAGLADAVGAKPGDAVFFAASTETREAQELLGAARIEIA 409

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEK----KIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +I+ + + FCW++D P +E   ++          H+PFT P               
Sbjct: 410 KRAKLIDESAWTFCWVVDAPMFERTSDDSGGAGGWTAVHHPFTSPNAEWVDRFEEAPDRA 469

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+ YD+VCNG EI  G IR H  +V  + F  +GI+ E  +++FG L  AF+ G PPHG
Sbjct: 470 LAYAYDIVCNGNEIGGGSIRIHRGDVQQRVFDLLGITPEEAQDKFGFLLEAFKYGAPPHG 529

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           GIA G DR+ MLL GA ++REV  FP ++   D L G+P+ ++ +Q  E G+
Sbjct: 530 GIAFGWDRVCMLLAGADSIREVIAFPKTRGGFDPLTGAPTPITAQQRAEAGI 581


>gi|225620713|ref|YP_002721971.1| aspartyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|254781719|sp|C0R2C9|SYD_BRAHW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225215533|gb|ACN84267.1| aspartyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 586

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/594 (40%), Positives = 352/594 (59%), Gaps = 12/594 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           R+++   G L   D+G  V+L+GWV R R HGG+IF+D+RD  G  Q+V NP+       
Sbjct: 2   RFKSAYNGILTKDDIGKEVKLAGWVLRRRDHGGVIFVDLRDRTGFVQIVFNPEISKEAHN 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ ++G + +RS E IN  I TG+IE+  +K+E+L+ +E  P  +  + + 
Sbjct: 62  DAQDLRSEYVISVEGKIRARSPEMINPKIPTGEIEVMVEKMELLNTSETPPFLLEDDIDT 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LDLRR T+  N+ KR +I N+ R  +    FI+  TPIL  S+PEGARDF
Sbjct: 122 GEDIRLKYRYLDLRRPTVFNNLYKRFQITNAFRKHLSDNGFIDVETPILNKSTPEGARDF 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQ+PQ +KQ+LM  GFDRY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 182 LVPSRLNAGDFYALPQSPQIFKQILMIGGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  D+ L+ MENV   + ++   G  +   F R+ Y DA+  YG+DKPD R  + + 
Sbjct: 241 TSFLNTDEFLSIMENVTANIVKDVY-GIDLPTPFPRLNYYDAMEMYGSDKPDTRFELKLI 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           NV +     +F VF   L  +  + +  + AKGG   +R   D   ++    G  GLA++
Sbjct: 300 NVEDAVRGCDFAVFKNAL--DNKFIIRCLNAKGGEKLSRKDIDDFTKYVGIFGAKGLAWM 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ + G  +    + K  +  N + I      + GD  FF+A  P        + R  
Sbjct: 358 --RVTDKGLESN---IVKFFSEENQKKILEVTKAEKGDLLFFVADTPKVTFDALGNLRLR 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A++L +I+ +   F W+++FP +E++ +EK+I   H+PFT P     ++  ++ L +++
Sbjct: 413 VAEKLNLIDKDKLNFLWVVEFPLFEYDHKEKRISATHHPFTAPVPEDVAILESEPLKVRS 472

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  GG R + S+V    F  +GI +E  + RFG L  A + G PP  G+
Sbjct: 473 DTYDLVLNGNEIGGGGQRIYDSKVQAIIFKLLGIDEEKAKLRFGFLLDALKYGAPPMCGM 532

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A GIDR+VMLL    ++REV  FP +Q    L+ G PSTV  +QL EL L I E
Sbjct: 533 AYGIDRVVMLLQKQDSIREVIAFPKTQKGQCLMSGCPSTVDADQLEELHLSIEE 586


>gi|119899528|ref|YP_934741.1| aspartyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|166225317|sp|A1KAJ9|SYD_AZOSB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119671941|emb|CAL95855.1| AspS protein [Azoarcus sp. BH72]
          Length = 599

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/591 (40%), Positives = 347/591 (58%), Gaps = 10/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +  + +   V L GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F+ A+
Sbjct: 2   RTQYCGQVTAAHLDQIVTLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+VL + G V  R A T NAN+ +G+IE+   +IE+L+ +   P  +  E    E+
Sbjct: 62  SVRNEFVLKMTGKVRRRPAGTENANLTSGEIEVLCHEIEVLNTSATPPFQLDDE-NLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + KN++ R ++  + R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPQMQKNLMLRYKVAMAFRRFLDGAGFIDVETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I   ME ++R VF+E S G  + + F R+ Y +A+RRYG+DKPDLR  + +  VT
Sbjct: 240 LNETEITALMEEMIRFVFKE-SLGVDLPSPFPRMTYAEAMRRYGSDKPDLRVTLELTEVT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +      F+VFS     N G  V A+   GG    R   D   ++    G  GLAYI   
Sbjct: 299 DLMKDVAFKVFSG--PANSGGRVAAMRVPGGATLTRGEIDEYTKFVGIYGAKGLAYIKVN 356

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                N  G+  P+ K+L+      +  R   Q GD  FF A D  K  + A  A R  +
Sbjct: 357 DASQPNETGLQSPIVKNLSEAALRGVIERTGAQSGDLIFFGA-DKAKVVNDAIGALRIKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             E G +  + +   W++DFP +E++E++K+    H+PFT P+     L   +     A 
Sbjct: 416 GHEKGYVTGDAWRPLWVVDFPMFEYDEDDKRWTACHHPFTSPKDEHVELLKTNPGECLAK 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDL  NG+EI  G +R H ++V    F  + I  E  + +FG L  A + G PPHGG+A
Sbjct: 476 AYDLALNGWEIGGGSVRIHRADVQATVFEALNIGAEEQQVKFGFLLDALKFGAPPHGGLA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+V ++ GA+++R+V  FP +Q    LL  +P  V  +QLREL +R+
Sbjct: 536 FGLDRVVTMMAGAESIRDVIAFPKTQRAQCLLTNAPGEVDEKQLRELHIRL 586


>gi|123967112|ref|YP_001012193.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|166225375|sp|A2BZ75|SYD_PROM5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123201478|gb|ABM73086.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 602

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/605 (38%), Positives = 355/605 (58%), Gaps = 24/605 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           R   C +L  SD+G  V L GWV R R HGG+IF+D+RDH G  Q+  NP+     F+ A
Sbjct: 2   RNKICEELNKSDIGKEVNLCGWVDRRRDHGGVIFIDLRDHSGFMQITINPEDGETLFKQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119
           + +R+E V+ ++G+V  R  ++IN NIITG++EL  Q ++IL+ +   LP PV       
Sbjct: 62  EILRNETVIMVNGIVNERPKDSINKNIITGELELKVQDLQILNQIKNNLPFPVSVHDYEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR  L +N+  R +II ++R  +    F E  TP+LT S+PEGARD
Sbjct: 122 TKEELRLKYRYLDIRRGKLLENLKTRHKIIKAIRNYLDNSGFTEVETPLLTKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP+R++ G F+ALPQ+PQ +KQLLM  G D+Y+QIA CFRDED R+DR P EF QLD+
Sbjct: 182 FLVPARLSNGDFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV +++I+   E +++ +++   N N ++ +F R+ + +A+  YGTD+PD R  +++
Sbjct: 241 EMSFVSEEEIIAFNEKLIKHIWKNVLNIN-LNEDFPRMSWQEAMDNYGTDRPDTRYGMLL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-----DRMNEWARSQGQP 354
            N+ E   +  F +F+K  ++  G  + +I  K G  + +         + + A+  G  
Sbjct: 300 KNLGEILGNIGFNIFTK--AIQMGGAIKSITIKNGNSSISNVRIKPGGDIFKVAQEAGAG 357

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GLA+I  + DE   +  +G +  +LN  +   I    + +DGD     AG          
Sbjct: 358 GLAFIRVKGDE---LETIGAIKNNLNKDHISNILKITEAEDGDLILLGAGSTKIVNQSLD 414

Query: 415 DARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESL 469
             R +IA++L ++      + + F WI DFP +E NEEEK+ +  H+PF  P+    E  
Sbjct: 415 RVRQYIAKDLNLLENQKAQSQWNFLWITDFPMFEMNEEEKRFEALHHPFCSPKNVKFEDK 474

Query: 470 K--GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           K     + +  A+ YDLV NG E+  G +R H +E+  +    VG++   ++ +FG L  
Sbjct: 475 KELTKKIETSTAYAYDLVLNGLELGGGSLRIHQAEMQKEVLRTVGLTDHQIDEKFGFLIE 534

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           A + G PPHGGIA G+DRI ML+LG  ++RE   FP +Q    LL  +PS VS  QL+EL
Sbjct: 535 ALEMGAPPHGGIAFGLDRITMLILGVDSIRETIAFPKNQQAKCLLTNAPSNVSKSQLKEL 594

Query: 588 GLRIV 592
            + I 
Sbjct: 595 DIEIT 599


>gi|329121016|ref|ZP_08249647.1| aspartate--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327471178|gb|EGF16632.1| aspartate--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 599

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/589 (40%), Positives = 352/589 (59%), Gaps = 11/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  C ++ +++ G  V L+GWV   R HGG+IF+D+RD  GI Q+V +P      F  A
Sbjct: 9   RTCECSNVSIAECGKEVTLAGWVQTRRDHGGLIFIDLRDRSGIVQLVFSPQHGEEAFHKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VRSE+VL + G+V  RS +TIN  +  G IE+   ++ +L+ ++  P  V    +  E
Sbjct: 69  EDVRSEYVLAVKGVVRERSEDTINEKMKNGNIEVVVSEMRVLNKSKTPPFYVEDGIDVDE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR K+R++DLRR  +  +++ R +I++++R  M    ++E  TPILT S+PEGARD+LV
Sbjct: 129 NIRLKHRYIDLRRPEMLNHLIMRHKIVHNIREYMNKHGYLEIETPILTKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G F+ALPQ+PQ +KQLLM SG ++YFQIA CFRDED R+DR P EF QLD+E S
Sbjct: 189 PSRVNPGEFFALPQSPQLFKQLLMVSGVEKYFQIARCFRDEDLRADRQP-EFTQLDIEAS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +Q+ IL+ ME +++ +F+E  N + V   F RI +DDA+  YG+DKPDLR  +  ++V
Sbjct: 248 FEDQEYILSLMERMMQQLFKEILNID-VPVPFKRIKWDDAMNLYGSDKPDLRFDMHFYDV 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+     +F+VF  I  V+ G  + AI  KG     R   D + ++    G  G+ ++ +
Sbjct: 307 TDLLRECDFKVFRSI--VDNGGVIKAINVKGYSDIPRRDLDDLVDYVGRYGAKGMVWMGF 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D  G +     V K L       I    + ++GD    IA  P        + R  +A
Sbjct: 365 QKD--GKLKCQ--VTKFLGEEKVREIGRFCEAEEGDLLLLIADKPKIVAHALGELRLEMA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   +IN N F F W+ DFP +E+NE+EK+    H+PFT P+         D   + A  
Sbjct: 421 RRRNLINENEFCFRWVTDFPMFEYNEDEKRYVAEHHPFTAPRDEDIQYLKTDPSKVYAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R +  E+  Q F  +G+S E  E RFG L  AFQ G PP  GIA 
Sbjct: 481 YDMVLNGTEIGGGSLRIYQPELQKQVFEAIGLSDEEAEERFGFLLEAFQYGAPPELGIAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR+VML+L  K++R+V  FP +Q+  D L  +PS VS +QLREL ++
Sbjct: 541 GLDRLVMLMLKCKSIRDVIAFPKTQSAIDPLTQAPSGVSDKQLRELHIK 589


>gi|332299449|ref|YP_004441370.1| aspartyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332176512|gb|AEE12202.1| aspartyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 580

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/593 (40%), Positives = 343/593 (57%), Gaps = 17/593 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH+CG L  SD G  V L+GWV ++R  G + FLD+RD YGITQ+    D +   +  
Sbjct: 2   YRTHTCGALRASDEGQQVTLAGWVAKIRRMGAMTFLDLRDRYGITQIFF--DESHQGLLS 59

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V  EWVL + G V  RS  ++N  I TGQIE+ A ++E+L+ A+  P  +    +  + 
Sbjct: 60  EVGREWVLAVTGTVRLRS--SVNEKIPTGQIEILADRMEVLNRADTPPFTIEDVSDGGDD 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  +  NI  R R+    R  +   +F+E  TP+L  S+PEGARDF+VP
Sbjct: 118 LRMKYRYLDLRRRPVLSNIELRHRMTMETRRYLDGLHFLEIETPMLIGSTPEGARDFVVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+N G FYALPQ+PQ +KQLLM +G DRYFQI  CFRDED R+DR P EF Q+D EMSF
Sbjct: 178 SRMNPGQFYALPQSPQTFKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMSF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VEQDDIL+T E + + +F+E   G  +     R+ + +A+ RYG+DKPDLR  + +  VT
Sbjct: 237 VEQDDILSTFEGLAKHLFKEI-RGIDLPTPLRRMTWYEAMDRYGSDKPDLRFGMEIEEVT 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW- 361
           E      F V      V+    + AI   G     R   D++ ++ + + Q G   + W 
Sbjct: 296 ETIQGHGFGV------VDSAAYIGAIVVTGKADYTRKQIDQLTDFVK-RPQVGAKGLLWL 348

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R    G +       K L     +A+  +L MQ GD  F I+GD           R HIA
Sbjct: 349 RYQPDGTMK--SSFDKFLTADQLKALADKLSMQPGDIAFLISGDKRPAQKQLGTLRLHIA 406

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            ELG++    +E  W++DFP  EW+EE ++    H+PFT P+   +    +D  S++A  
Sbjct: 407 SELGLMKPGQYECLWVVDFPLLEWDEETQRYYAMHHPFTAPKPEDQDRLESDPGSVRADA 466

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H +E+  + F+ +G +KE  E +FG L  AF+ G PPHGGIA 
Sbjct: 467 YDMVINGVEVGGGSIRIHDAELQARVFATLGFTKERAEEQFGFLMNAFKYGAPPHGGIAF 526

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR V L+    ++R+   FP + +  D+++ +P+ +  EQL EL L + E 
Sbjct: 527 GLDRWVSLMAELDSIRDCIAFPKNNSGRDVMIDAPARLDPEQLDELHLTVRET 579


>gi|94995326|ref|YP_603424.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|94548834|gb|ABF38880.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 599

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/593 (39%), Positives = 352/593 (59%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++   
Sbjct: 20  RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 79

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++G V +R  +  N  + TG +EL    + IL+ A+  P  +  + E  
Sbjct: 80  AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 137

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 138 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 197

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 198 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 256

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++ +
Sbjct: 257 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDIAMNSYGSDKPDTRFEMLLQD 315

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +T      +F+VFS+  +V       AI  KG     +R   D++ E+A+  G  GLA  
Sbjct: 316 LTVTVKGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 367

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W     G +A  GPVAK L  + TE +  +L + + D   F+A D L+  +    A RN
Sbjct: 368 -WVKVTDGQLA--GPVAKFLIAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 422

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++
Sbjct: 423 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 482

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG
Sbjct: 483 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 542

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I
Sbjct: 543 LAIGLDRFVMLLAGKGNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 595


>gi|330466927|ref|YP_004404670.1| aspartyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328809898|gb|AEB44070.1| aspartyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 606

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/600 (39%), Positives = 348/600 (58%), Gaps = 20/600 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  +D G+ V L+GWV R R HGG+IF+D+RD  G+ QVV        E A +
Sbjct: 3   RTHDAGSLRATDAGTTVTLAGWVARRRDHGGVIFVDLRDGSGVVQVVFRE-----EDAHA 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  + TG+IE++A ++++LS A  LPLPV  +    + I
Sbjct: 58  LRNEYCVKVVGEVTRRPEGNENPELPTGEIEVTASELDVLSEAAPLPLPVDDQVVAGDDI 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR    K +  R+R     R  +   +F+E  TP LT S+PEGARDFLVP 
Sbjct: 118 RLKYRYLDLRRSGPAKAMRLRSRANQLARTVLHERDFLEIETPTLTRSTPEGARDFLVPV 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 178 RLQPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +DD+++  E ++  ++ + + G  +     RI + DA+ RYG+DKPDLR  + +  +T+
Sbjct: 237 TEDDVIDLGEAIVSALWSDLA-GYEIPRPIPRITWHDAMARYGSDKPDLRYGVELTELTD 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + FRVF+   +++ G  V A+   GG    R   D   +WA+++G  GLAY+   L
Sbjct: 296 YLRGTTFRVFAG--AIDAGGYVGAVVMPGGASQTRKELDGWQDWAKARGAKGLAYVV--L 351

Query: 364 D-ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS-FAADARNHIA 421
           D E+G     GPVAK+L+  +   +   +  + GD+ FF A    +        AR  IA
Sbjct: 352 DAETGEA--RGPVAKNLSAEHLNGLADAVGAKPGDAIFFAASAETREAQELLGAARIEIA 409

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKI----DFAHNPFTMPQGGMESLKGNDLLSI 477
           +  G+I+ + + FCW++D P +E   +E          H+PFT P               
Sbjct: 410 KRAGLIDESAWAFCWVVDAPMFERTSDESGAADGWTAVHHPFTSPNSEWVDRFEEAPDRA 469

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+ YD+VCNG EI  G IR H  +V  + F  +GI+ E  +++FG L  AF  G PPHG
Sbjct: 470 LAYAYDIVCNGNEIGGGSIRIHRRDVQQRVFDLLGITPEEAQDKFGFLLEAFSYGPPPHG 529

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           GIA G DR+ MLL GA ++REV  FP ++   D L G+P+ ++ +Q  E G+     P +
Sbjct: 530 GIAFGWDRVCMLLAGADSIREVIAFPKTRGGFDPLTGAPTPITAQQRTEAGIDAKPKPTQ 589


>gi|119868391|ref|YP_938343.1| aspartyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|166225366|sp|A1UFE5|SYD_MYCSK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119694480|gb|ABL91553.1| aspartyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 590

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/604 (40%), Positives = 341/604 (56%), Gaps = 30/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+ G L  +D G  V L+GWV R R HGG+IF+D+RD  G++QVV   + A  E A  
Sbjct: 3   RSHAAGSLRPADAGQNVTLAGWVARRRDHGGVIFIDLRDASGVSQVVFR-EGAVLEAAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + ++G+V  R     N  I TG IE++A  + +L   E  PLP   + E  E  
Sbjct: 62  LRAEFCVAVEGVVEVRPEGNENPEIPTGGIEVNATSLTVLG--ESAPLPFQLDDEAGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+   K +  R+++  + R  +   +F+E  TP +T S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRREGPGKALRLRSKVNAAAREVLARHDFVEIETPTMTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + DD++   E +L+ ++     G+ +     RI Y +A+ R+GTDKPDLR  + +    E
Sbjct: 239 DADDVIAVSEEILKALWALI--GHDLPTPLPRITYAEAMHRFGTDKPDLRFGLELVECKE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 297 FFADTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEWAKQRGAKGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G +   GPVAK+L     + +   +    GD  FF AG P    +    AR  IA+ 
Sbjct: 348 GDDGTLG--GPVAKNLTDAERDGLAAHVGANPGDCIFFAAGPPKSSRALLGAARIEIAKR 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473
           L +I+ + + F W++D+P +E  E+     D A         H+ FT PQ   E+    D
Sbjct: 406 LDMIDPDAWAFTWVVDWPLFEMAEDATAAGDVAVGSGAWTAVHHAFTAPQPQSEATFDTD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                A  YD+VCNG EI  G IR H  +V  + F+ +GI  +  + +FG L  AF  G 
Sbjct: 466 PAGALADAYDIVCNGNEIGGGSIRIHRRDVQERVFAMMGIEHDEAQEKFGFLLDAFTFGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G DRI  LL    ++REV  FP S    D L G+P+ ++ +Q RE G  I  
Sbjct: 526 PPHGGIAFGWDRITALLARMDSIREVIAFPKSGGGADPLTGAPAPITPQQRRESG--IDA 583

Query: 594 NPKK 597
            PKK
Sbjct: 584 KPKK 587


>gi|302525826|ref|ZP_07278168.1| aspartyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302434721|gb|EFL06537.1| aspartyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 598

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/597 (40%), Positives = 341/597 (57%), Gaps = 30/597 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +    E A +
Sbjct: 3   RTHQAGTLRAGQAGQTVTLTGWVARRRDHGGVIFIDLRDASGVAQVVFR-EGEMAERAHA 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + + G V  R     N +I TG+IE+ A ++E+LS A  LP P+    +  E +
Sbjct: 62  LRSEFCVKVVGEVSKRPEGNANPDIATGEIEVLATELEVLSEAAPLPFPIDDRVDVGEEV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR      I  R+ +    R  + A++F+E  TP +T S+PEGARDFLVP+
Sbjct: 122 RLKYRYLDLRRSGPAAAIRLRSEVSRVAREVLHAQDFVEIETPTMTRSTPEGARDFLVPA 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RYFQIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 182 RLKPGSWYALPQSPQLFKQLLMVGGMERYFQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E +++ +++    G+ ++    RI Y +A+ +YG+DKPDLR  + +  +T+
Sbjct: 241 EQDDVIAVGEAIVKALWKLI--GHEIATPIPRITYREAMAKYGSDKPDLRFDLEITELTD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    + A G    R   D   EWA+ +G  GLAY+   ++
Sbjct: 299 FFSDTPFRVFQAP------YVGAVVMAGGASQPRRQLDAWQEWAKQRGAKGLAYVL--VN 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L+      +      + GD  FF AG           AR+ I ++L
Sbjct: 351 EDGTLG--GPVAKNLSETERANVAEAAGAKPGDCIFFAAGKVSAAQPLLGAARDEIGRKL 408

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE--------EKKIDFAHNPFTMPQ----GGMESLKGN 472
           G+I+ + + F W++D P +   E+          K    H+ FT P        E   GN
Sbjct: 409 GLIDEDAWSFVWVVDAPLFAPVEDIGDDVAVGSGKWTAVHHAFTSPTPEWIDKFEQDPGN 468

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            L    A+ YDLVCNG EI  G IR H  +V  + F+ +G+ +E  + +FG L  AFQ G
Sbjct: 469 AL----AYAYDLVCNGNEIGGGSIRIHREDVQKRVFALMGLGEEEAQEKFGFLLEAFQFG 524

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            PPHGGIA G DRIVMLL  A ++R+V  FP +    D L  +P+ ++ +Q +E G+
Sbjct: 525 APPHGGIAFGWDRIVMLLAKADSLRDVIAFPKTGGGYDPLTAAPAPITAQQRKEAGI 581


>gi|257416406|ref|ZP_05593400.1| aspartyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257158234|gb|EEU88194.1| aspartyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|315147633|gb|EFT91649.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX4244]
          Length = 589

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/592 (40%), Positives = 350/592 (59%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+ +   +EIA
Sbjct: 4   RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    +
Sbjct: 64  DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    EN+L  V +E + G  +S  F R+ YD+A+ RYG+DKPD R  + + +V
Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMSYDEAMARYGSDKPDTRFAMELIDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            +     +F+VF   L  N G+ V A+ AKG     +R   D + ++    G  GLA++ 
Sbjct: 302 ADVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK L  V+ E I    + + GD   F A  P    +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+    +    D  S+ A 
Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLAIDPASVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA
Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|27262452|gb|AAN87507.1| Aspartyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 559

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 226/556 (40%), Positives = 343/556 (61%), Gaps = 12/556 (2%)

Query: 39  LDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIEL 96
           +D+RD  G+ QVV +P+     F  A+SVR+E+VL + G V +R   T+NAN+ TG++E+
Sbjct: 1   MDLRDRSGLVQVVFSPEVGQEAFTKAESVRNEYVLAVTGDVKARPEGTVNANLPTGEVEV 60

Query: 97  SAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM 156
            A+++ IL+ A+  P  +  + +  E +R KYR+LDLRR  + +N++ R +   +MR  +
Sbjct: 61  YARQLLILNAAKTPPFYIEDDVDVDEMVRLKYRYLDLRRPEMQRNLIVRHKTAKAMRDFL 120

Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216
               F+E  TP+L  S+PEGARDFLVPSRV+ G F+ALPQ+PQ YKQ+LM SG +RYFQI
Sbjct: 121 DRNGFLEIETPMLINSTPEGARDFLVPSRVHPGEFFALPQSPQIYKQILMVSGMERYFQI 180

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
             CFRDED R+DR P EF QLD+EMSFVE DDIL+ ME ++  +F E + G  +  +F R
Sbjct: 181 VRCFRDEDLRADRQP-EFTQLDIEMSFVEMDDILSLMEKMVSFIFRE-ALGKEIPASFRR 238

Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
           I Y +A+ RYG+DKPDLR  + + +VT+     EF+VF+ +     G ++  I AKG   
Sbjct: 239 IPYSEAMGRYGSDKPDLRFGLELTDVTDVVKDVEFKVFAAV--AKGGGQIKGINAKGCAH 296

Query: 337 -NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
            +R   D + +     G  GLAYI  ++   G  +   P++K         +   +  + 
Sbjct: 297 FSRKEIDELTKLTAIYGAKGLAYI--QMTPEGPKS---PISKFFTDEQFADLLQTMQAET 351

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
           GD   F+A  P    +   + R  + + L +I+    EF W++DFP  E++ EEK+    
Sbjct: 352 GDLLMFVADKPSVVAAALGNLRLELGRRLNLIDPEKLEFAWVVDFPLLEYDAEEKRYVAI 411

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           H+PFT P+    SL  +D   ++A  YDLV NG E+  G +R +  ++  + FS +G S+
Sbjct: 412 HHPFTSPKDEDLSLLDSDPAKVRAKAYDLVLNGVELGGGSLRIYHRDIQEKMFSLLGFSQ 471

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
           E    +FG L  AF+ G PPHGGIA G+DR++ML++G   +R+V  FP +Q+  DL++G+
Sbjct: 472 EEATQKFGYLLEAFEYGTPPHGGIAFGLDRMIMLMMGRDTIRDVIAFPKTQSSSDLMVGA 531

Query: 576 PSTVSVEQLRELGLRI 591
           P+TVS +QL+EL +++
Sbjct: 532 PNTVSPKQLKELHIKL 547


>gi|21911350|ref|NP_665618.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28896724|ref|NP_803074.1| aspartyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|25009289|sp|Q8K5J0|SYD_STRP3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|21905565|gb|AAM80421.1| putative aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28811978|dbj|BAC64907.1| putative aspartyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 582

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/593 (39%), Positives = 351/593 (59%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++   
Sbjct: 3   RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++G V +R  +  N  + TG +EL    + IL+ A+  P  +  + E  
Sbjct: 63  AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V +E    + V+    R+ YD A+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPLPRMSYDVAMNSYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +T      +F+VFS+  +V       AI  KG     +R   D++ E+A+  G  GLA  
Sbjct: 299 LTVTVKGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W     G +A  GPVAK L  + TE +  +L + + D   F+A D L+  +    A RN
Sbjct: 351 -WVKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++
Sbjct: 406 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I
Sbjct: 526 LAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 578


>gi|52841708|ref|YP_095507.1| aspartyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|62287535|sp|Q5ZVG2|SYD_LEGPH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|52628819|gb|AAU27560.1| aspartyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 593

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/591 (39%), Positives = 346/591 (58%), Gaps = 8/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH C  +    +   + + GWVH  R HGG+IFLDIRD  G+ QVV  P++   F IA+
Sbjct: 2   RTHYCSAVNELSLDKQITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+V+ + G+V  R    IN  + TG++E+   ++EIL+ +   P      +   E 
Sbjct: 62  KLRSEFVVRVTGIVRKRPEGMINDKMETGRVEVIGTQLEILNQSPTPPFLPDDHQIINED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R+KYR++DLRR  + K +  R ++ + +R  +  +NF++  TP+LT ++PEGARD+LVP
Sbjct: 122 LRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF QLD+EM+F
Sbjct: 182 SRVHPGQFYALPQSPQLFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DIL  +E +L+ VF+E  N  T+ +   R+ Y +A+ RYG+DKPDLRNP+ + ++ 
Sbjct: 241 INEEDILQLIEGLLKIVFKEILN-ITLPDKLPRMSYKEAMTRYGSDKPDLRNPLELIDIA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F VF+   + N G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 300 DLVKDCDFNVFASAANDNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVN- 358

Query: 364 DESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           D S  +AG+  P+ K L+     +I  R++ Q GD  FF A             RN +  
Sbjct: 359 DLSAGMAGLQSPILKFLSETAVHSILNRVEAQTGDVIFFGADKAHVVNESMGALRNKLGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +  +IN   ++  W++D+P +E + +  K+   H+PFT PQ    E+L+     ++ A  
Sbjct: 419 DRNLINSG-WQLLWVVDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTL-AKA 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+EI  G IR H  E+    F  +GI ++    +FG L  A Q G PPHGGIA 
Sbjct: 477 YDIVINGYEIGGGSIRIHQPELQKTVFDLIGIDEQEAHEKFGFLLDALQYGAPPHGGIAL 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR+ MLL  + ++R+V  FP +Q     L  +PS     QL ELG+R+ 
Sbjct: 537 GIDRLAMLLTDSTSIRDVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLA 587


>gi|254823291|ref|ZP_05228292.1| aspartyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 591

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 242/605 (40%), Positives = 345/605 (57%), Gaps = 30/605 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+ G L  SD G  V L+GWV R R HGG+IF+D+RD  GITQVV   +    + A  
Sbjct: 3   RSHAAGSLRSSDAGQQVTLAGWVARRRDHGGVIFIDLRDASGITQVVFRAEDVLAQ-AHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R     N  I TG+IE++A  + +L   E  PLP   +    E +
Sbjct: 62  LRAEFCVAVSGVVEIRPEGNANPEIATGEIEVNATALTVLG--ESAPLPFQLDEPAGEEL 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRRD   + I  R+++  + R  +   +F+E  TP +T S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRRDGPAEAIRLRSKVNAAARAVLAQHDFVEIETPTITRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 180 RLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +DIL   E +L  ++     G  +     RI Y +A+RR+G+DKPD+R  + + + TE
Sbjct: 239 DAEDILAISEEILSALWALI--GYQIPTPIPRISYAEAMRRFGSDKPDMRFGLELVDCTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 297 FFKDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEWAKQRGHRGLAYVL--I 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G +   GPVAK+L+    + +   +  + GD  FF AG P    +    AR  IA  
Sbjct: 348 ADDGTLG--GPVAKNLSDAERDGLAAHVGAEPGDCVFFSAGPPKPSRALLGAARGEIAHR 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473
           LG+I+ + + F W++D P +E  ++     D A         H+ FT P+ G E     D
Sbjct: 406 LGMIDPDAWAFVWVVDPPLFEPADDATAAGDVAVGSGAWTAVHHAFTSPKPGHEDAIDTD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             ++ A  YD+VCNG EI  G IR H  ++  + F+ +G+     E +FG L  AF  G 
Sbjct: 466 PGNVLADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDHAEAEEKFGFLLEAFTFGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G DRI  LL G  ++REV  FP +    D L  +P+ ++ +Q +E G  I  
Sbjct: 526 PPHGGIAFGWDRINALLSGVDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESG--IDA 583

Query: 594 NPKKI 598
            P+K+
Sbjct: 584 KPEKV 588


>gi|163782929|ref|ZP_02177924.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881609|gb|EDP75118.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 603

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/603 (38%), Positives = 352/603 (58%), Gaps = 23/603 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           R   CG++ + D+   + L GWVHRVR HGG++F+D+RD  GI QVVA   S    +E A
Sbjct: 10  RDKYCGEVSLEDIDRELNLCGWVHRVRNHGGVVFIDLRDREGIVQVVAEESSNPTAYEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             V+ EWV+ I G V  R   T N  + TG +E+ A+ I + + +E  P PV  E    E
Sbjct: 70  DRVKPEWVVGIRGKVRRRPEGTENPKLKTGYVEVVAEDIRVFNTSEVPPFPVEEETNVSE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++ KYR++DLRR ++ +N++ R +     R     E F+E  TP LT S+PEGARDF+V
Sbjct: 130 ELKLKYRYIDLRRFSMMENMLFRHKFYQLTRRFFEEEGFVEIETPFLTKSTPEGARDFIV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQ+PQ +KQ+LM SGFDRYFQ+  CFRDED R+DR P EF Q+D EMS
Sbjct: 190 PSRLHPGKFYALPQSPQLFKQILMVSGFDRYFQVVKCFRDEDLRADRQP-EFTQIDYEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV +DD++   E ++  +F+E   G  +S  F R+ Y + + R+G+DKPD R  + +  +
Sbjct: 249 FVNEDDVIGVAERLVAHLFKELL-GVELSTPFERLPYGEVMERFGSDKPDRRFGLELIEL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++ F ++EF+VF  +L  + G  + AI  KG   +R   D +  + +  G  GLA   W 
Sbjct: 308 SDIFKNTEFKVFKGVL--DKGGIIKAINFKGSNLSRKEIDDLTRFVQKLGAKGLA---WI 362

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E+G +  + P+ K  +   TE +  R+  ++GD  FF A             R  +A+
Sbjct: 363 KVEAGKL--VSPIVKFFSEEETENLLERVKAEEGDVIFFSADSKEMVYKVLGALRLELAK 420

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-----MESLKGNDLL-- 475
             G+I+ + ++  W++DFP  EW+EEE +    H+PFT P+        E+LK +D+   
Sbjct: 421 SHGLIDESRWDVLWVVDFPLMEWDEEEGRFVSLHHPFTAPREEDIPKLKEALKTDDIEER 480

Query: 476 -----SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
                S++A  YDLV NG E+  G IR H +++    F  + I +   + +FG L  A +
Sbjct: 481 KRLVHSVRARAYDLVINGEEVGGGSIRIHTTDLQEVVFKLLDIGEVEAQEKFGFLLEALR 540

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGG+A G+DR+V L+ G  ++R+V  FP +Q    +L  +P  V+ +QL+E+ ++
Sbjct: 541 FGAPPHGGLAFGLDRLVALMRGLDSIRDVIAFPKTQKGICMLTSAPDYVTPKQLKEVHIK 600

Query: 591 IVE 593
           + E
Sbjct: 601 VSE 603


>gi|134298624|ref|YP_001112120.1| aspartyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|238685538|sp|A4J2J2|SYD_DESRM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|134051324|gb|ABO49295.1| aspartyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 600

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 236/597 (39%), Positives = 346/597 (57%), Gaps = 11/597 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           +RT  CG+L     G  V L GWV R R HGG+IF+D+RD  GI QVV +P  D   F+ 
Sbjct: 10  HRTLYCGELHKQHEGQEVTLMGWVQRRRDHGGLIFVDLRDRSGIVQVVFSPEVDQEAFKK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VL + G V  R   TIN N+ TG++E+ A  + +L+ A+  P  +    E  
Sbjct: 70  AEGVRNEYVLAVVGRVNGRPEGTINPNMATGEVEVYAHTLRLLNRAKTPPFYIEDNIEVD 129

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R +YR+LDLRR  +HK ++ R R   S+R  +    F+E  TP+LT S+PEGARD+L
Sbjct: 130 ENLRLRYRYLDLRRPEMHKAMMLRHRASKSIRDFLDQHGFLEIETPMLTKSTPEGARDYL 189

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ +KQ+LM +G +RYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 190 VPSRVNPGKFYALPQSPQLFKQILMLAGMERYFQIVRCFRDEDLRADRQP-EFTQIDLEM 248

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE +D++  ME ++  V  + + G  +S    R+ Y +A+ R+G+DKPD R  + + +
Sbjct: 249 SFVEAEDVMGLMEQMIAEVCSD-TIGVKISTPIPRLSYQEAMDRFGSDKPDTRFGLELKD 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +T       F+VF+   +V  G ++  I AKG    +R   D +  +       GLAY  
Sbjct: 308 ITPIAAQCGFKVFNS--TVAGGGQIKGINAKGCASFSRKEIDDLTAFVAVYKAKGLAYFI 365

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             ++E G+V     +AK        AI+ +++ Q GD   F+A  P    +     R H+
Sbjct: 366 --INEDGSVKSA--IAKFFTEEEIAAIKDKMEAQPGDLLLFVADKPAVVAASLGALRVHL 421

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ L +I    + F W+ DFP  E++ E  +    H+PFT P      L  ++   ++A 
Sbjct: 422 AERLELIPQGMWNFLWVTDFPLLEYDSEAGRFFAMHHPFTSPAEEDLPLLESNPGKVRAR 481

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H  ++    F  +G+S+E  + +FG +  AF+ G PPHGG+A
Sbjct: 482 AYDMVLNGVEIGGGSIRIHRRDIQELMFKALGMSQEEAKEKFGFMLEAFEYGAPPHGGLA 541

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VMLL G  ++R+V  FP + +   L+  +P  V   QL EL +R     KK
Sbjct: 542 FGLDRLVMLLAGKDSIRDVIAFPKTASATCLMTQAPDVVDPAQLAELHIRSTAPVKK 598


>gi|325972753|ref|YP_004248944.1| aspartyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324027991|gb|ADY14750.1| aspartyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 598

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/597 (40%), Positives = 349/597 (58%), Gaps = 15/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT +CG L  +D G  V L+GWVHR R HG + F+++RD YGITQVV + D+  A   +A
Sbjct: 9   RTTTCGALTKADNGKIVVLNGWVHRDRNHGALHFINLRDRYGITQVVVDDDASPALQAVA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +  E+ + + G+V  R    +N  + TG+IE+ AQ IEILS    LP  +   +E  E
Sbjct: 69  SELHLEYCIAVTGIVRQRPDSMVNPEMSTGEIEVKAQSIEILSRCAPLPFQIDDGKETRE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   + + +  R   I + R  + + +F E  TP +  S+PEGARDFLV
Sbjct: 129 DLRLKYRYLDLRSQGMQQRLKLRHDFILACRKYLSSRDFYEIETPTMIKSTPEGARDFLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQ+LM  G D+YFQIA C+RDED R DR   EF QLD+EMS
Sbjct: 189 PSRIYAGKFYALPQSPQLFKQILMVGGMDKYFQIARCYRDEDARGDR-QLEFTQLDVEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++DD+L+ ME +   VF E  N   +   F R+ Y+DA+  YG DKPDLR  + + +V
Sbjct: 248 FVKRDDVLSLMEGLFNSVFREVMN-YELPARFRRLTYNDALNTYGCDKPDLRFDVPLCDV 306

Query: 303 TEHFVHSEFRVFSKILSVNPGY--EVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            E    S F  F  I++ N GY   + A   +G   +R +   + + A+  G  GLA+I 
Sbjct: 307 NELAQKSSFATFKDIVA-NGGYVKALCAPKTEGVDFSRKYITELEDAAKVYGAQGLAWI- 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
            ++ E+ +++  G V+K    +  E +  ++D ++GD   F+A    K C  +  A R  
Sbjct: 365 -KVGENKSLS--GGVSKFFAGLEAELL-AKVDAKEGDLILFVAHQNWKKCCASLSAVRTK 420

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + ++L +I    FEFCWI+DFP +E+NEE    + AH+ F+MPQ        +D  S+K 
Sbjct: 421 LGRDLKLIR-KAFEFCWIIDFPLFEYNEEGGHWEAAHHMFSMPQAEYLDTLESDPGSVKG 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+E+ASG IR H  E+  + F       +  E RFG L  AF+ G PPHGGI
Sbjct: 480 DLYDLVLNGYEVASGSIRIHDVELQKRIFRICNFDDKTAEERFGFLLNAFRYGPPPHGGI 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR+VM++    ++ EV  FP +      +  SPS V  +QL +L L I+  PK
Sbjct: 540 APGVDRMVMIMSEQTSIHEVIAFPKNTAAVSPMDDSPSEVDQQQLDDLHL-IINYPK 595


>gi|226950483|ref|YP_002805574.1| aspartate--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|254781725|sp|C1FKE5|SYD_CLOBJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226841119|gb|ACO83785.1| aspartate--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 593

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 242/595 (40%), Positives = 361/595 (60%), Gaps = 18/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+   +++G  V + GWV R R  GG+IF+D+RD  GI Q+V   +     FE +
Sbjct: 10  RTIMCGEPRENNIGEKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEKS 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +V+SE+ + + G ++ R  ++ N ++ TG +EL  + I+ILS +E  P+ +    +  E
Sbjct: 70  DNVKSEYCIAVTGEIVKR--QSPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDASE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + K  + R +    +R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 128 NVRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE+DD+++  E +L  VF+E + G  V     R+ Y  A+ +YG+DKPDLR  + ++++
Sbjct: 247 FVEEDDVIDLNEKLLAKVFKEVA-GIDVKLPIERMPYKIAMEKYGSDKPDLRFGMEINDL 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           TE   +SEF+VF    ++  G  V AI A+      R   D++ ++ ++    GLA+I +
Sbjct: 306 TEAVKNSEFKVFKG--AIEAGGSVRAIKAENCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           + DE  +     P+AK L     +AI  ++D + GD    +A  + + F S  A  R H+
Sbjct: 364 KEDEIKS-----PIAKFLTEEEMKAILEKMDAKVGDLILIVADKNNVVFESLGA-LRLHL 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL IIN + F F WI +FP   +NEEE +    H+PFT        L   D   ++A 
Sbjct: 418 AKELDIINKDEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIDLLDTDPGKVRAK 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H S++  + FS +G +KE    RFG L  AF+ G PPHGG+A
Sbjct: 478 AYDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGLA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR++M L G +N+++V  FP +QN FC  L  +P+ V   QL ELG++ +E 
Sbjct: 538 YGLDRMIMFLAGTENIKDVITFPKNQNAFCP-LTEAPNVVDENQLEELGIKKIEK 591


>gi|225568634|ref|ZP_03777659.1| hypothetical protein CLOHYLEM_04712 [Clostridium hylemonae DSM
           15053]
 gi|225162562|gb|EEG75181.1| hypothetical protein CLOHYLEM_04712 [Clostridium hylemonae DSM
           15053]
          Length = 595

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 235/592 (39%), Positives = 352/592 (59%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH CG+L  ++ G  V + GWV + R  GG++F+D+RD  GI Q+V    + DS   E 
Sbjct: 10  RTHRCGELSGANAGQTVTVMGWVQKNRNKGGLVFIDVRDRSGIIQIVFEEGSTDSGLIEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +R+E+V+ + G V  RS   +N N+ TG IE+   ++ ILS +E  P P+    +  
Sbjct: 70  AAKLRAEFVVAVTGEVKKRSG-AVNENLSTGDIEIIPSQLRILSESETPPFPIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L KN++ R+++    R  +  E F+E  TPIL  S+PEGARD+L
Sbjct: 129 EEVRLKYRYLDLRRPDLQKNMIMRSQVATLTRQFLAEEGFLEIETPILIGSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++QG FYALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRIHQGHFYALPQSPQLFKQLLMCSGYDRYFQIAKCFRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L  +F++   G  V     R+ + +A+ RYG+DKPD R  + + +
Sbjct: 248 SFVDVDDVIDVNERLLAKLFKDVL-GVEVVLPIPRMTWQEAMDRYGSDKPDTRFGMELTD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           VT+     EF VF    ++  G  V  I AKG GG  R   D++ ++AR  G  GLAYI 
Sbjct: 307 VTDVVKDCEFAVFKG--AIENGGTVRGINAKGQGGMPRKKIDKLVDFARDFGAKGLAYI- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G+V      AK +       +   +  ++GD   F A           + R  +
Sbjct: 364 -AVQEDGSVK--SSFAKFMKEEEMSGLIEAMGGENGDLLLFAADKNKVVWDVLGNLRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++ +++ + ++F W+ +FP  EWNEE+++    H+PFTMP          D   ++A 
Sbjct: 421 ARQMELLDKSEYKFLWVTEFPLLEWNEEQERYTAMHHPFTMPMEEDLEYIDTDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R +  +V  + F  +G + E  + +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIYHQDVQNKMFEVLGFTPEKAQEQFGFLLNAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VML+    ++R+V  FP  ++  DL+  +P+ V  +QL ELGL + 
Sbjct: 541 YGLDRMVMLMAKEDSIRDVIAFPKVKDASDLMTEAPTAVEEKQLEELGLSVT 592


>gi|118602419|ref|YP_903634.1| aspartyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166225385|sp|A1AW56|SYD_RUTMC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|118567358|gb|ABL02163.1| aspartyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 583

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 224/590 (37%), Positives = 355/590 (60%), Gaps = 17/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH CG+L   ++G  V + GWV+R R HGG+IFLD+RD +GI QVV NPD+A F +A++
Sbjct: 2   RTHFCGELNKDNIGQTVEIYGWVNRRRDHGGVIFLDMRDKHGIAQVVINPDNADFSLAET 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E+VL I G +++R     N  + TG+IE+ AQ IEIL+ ++ +P  +    +  E +
Sbjct: 62  VRNEFVLKITGTIIARGEGLTNPKLSTGKIEIKAQNIEILNTSKPVPFQI-DATDTSEEV 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLR DT+   +  R+R+   MR  M   +F++  TP LT ++PEGARD+LVPS
Sbjct: 121 RLRYRYLDLRSDTMQNRLRLRSRVTRYMREFMDEHDFLDIETPFLTKATPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R + G F+ALPQ+PQ +KQLLM SGF+RY+QI  CFRDED R+DR P EF QLD+E SF+
Sbjct: 181 RTHSGKFFALPQSPQLFKQLLMMSGFERYYQIVKCFRDEDLRADRQP-EFTQLDVETSFM 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +++I+  ME + RG+F+   N + + +NF  I Y D++ +YG D+PD+R  + + ++ +
Sbjct: 240 SENEIMTMMEKMTRGLFKLVINVD-LGDNFPTITYADSMAKYGLDRPDMRISMQIVSIDK 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                +F+VFS   + +           G   +R   D+  ++    G  GLAYI  +L+
Sbjct: 299 IMQGVDFKVFSGPANYDDSRVAALKVPNGASISRKNIDKYTKYVSIYGAKGLAYI--KLN 356

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD---GDSCFFIAGDPLKFCSFAADARNHIA 421
           ++      GP +  L  +  E I   ++M D   GD  FF A           + R  +A
Sbjct: 357 KN------GPASPILKFLGDEVIAKVIEMTDAKTGDIIFFGADKSKIVNEALGNLREQLA 410

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L + +   +   W++DFP +E   ++  ++  H+PFT P    ++L+     ++    
Sbjct: 411 KDLDLFDTQ-WAPIWVVDFPMFEVG-DDGSLNTTHHPFTAPSVDAKTLEKTATTALSK-A 467

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR H  ++       +GIS + ++++FG    A + G PPHGG+A 
Sbjct: 468 YDLVINGSEVGGGSIRIHQIDMQKTVLKLLGISDQEIQDKFGFFLNALEYGCPPHGGMAF 527

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++M++ GA ++R+V  FP +Q    LL  +P+++S + LREL ++I
Sbjct: 528 GLDRLMMIMTGANSIRDVVAFPKTQTAACLLTDTPTSISRKLLRELSVKI 577


>gi|290893878|ref|ZP_06556856.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290556595|gb|EFD90131.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 591

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 235/594 (39%), Positives = 340/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGTVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I    E++L  V +E  N  T+   F R+ Y +A+ R+G+DKPD+R  + + NV
Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           ++     +F+VF    ++  G EV AI AK    N  R   D +  +  + G  GLA   
Sbjct: 302 SDVAKDVDFKVFQS--AIENGGEVKAINAKSAAANFSRKDLDALGVFVANYGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E+G +   GP+AK         ++  L  +DGD   F A       +     RN +
Sbjct: 357 WLKVEAGELK--GPIAKFFPEDKAAELKAALQAEDGDLLLFAADKADIVAASLGALRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A 
Sbjct: 415 GKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA
Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTGESAKEQFGFLMDALEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+ 
Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSAAQLAELKLETVKK 588


>gi|168179548|ref|ZP_02614212.1| aspartyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182669835|gb|EDT81811.1| aspartyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 593

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/595 (41%), Positives = 359/595 (60%), Gaps = 18/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+   +++G  V + GWV R R  GG+IF+D+RD  GI Q+V   +     FE +
Sbjct: 10  RTIMCGEPRENNIGQKVIVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEKS 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +V+SE+ + + G ++ R  ++ N ++ TG +EL  + I+ILS +E  P+ +    +  E
Sbjct: 70  DNVKSEYCIAVTGEIVKR--QSPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDASE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + K  + R +    +R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 128 NVRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE+DD++   E +L  VF+E   G  V     R+ Y  A+ +YG+DKPDLR  + ++++
Sbjct: 247 FVEEDDVIELNERLLAKVFKEIG-GIDVKLPIERMPYKIAMEKYGSDKPDLRFGMEINDL 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           TE   +SEF+VF    S+  G  V AI A+      R   D++ ++ ++    GLA+I +
Sbjct: 306 TEAVKNSEFKVFKG--SIEAGGSVRAIKAENCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           + DE  +     P+AK L     +AI  ++D + GD    +A  + + F S  A  R HI
Sbjct: 364 KEDEIKS-----PIAKFLTEEEMKAILEKMDAKAGDLILIVADKNNVVFESLGA-LRLHI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL IIN N F F WI +FP   +NEEE +    H+PFT        L   +   ++A 
Sbjct: 418 AKELDIINKNEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIELLDTEPGKVRAK 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H S++  + FS +G +KE    RFG L  AF+ G PPHGG+A
Sbjct: 478 AYDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGLA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR++M L G +N+++V  FP +QN FC  L  +P+ V   QL ELG++ +E 
Sbjct: 538 YGLDRMIMFLAGTENIKDVITFPKNQNAFCP-LTEAPNVVDENQLEELGIKKIEK 591


>gi|312877306|ref|ZP_07737273.1| aspartyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795939|gb|EFR12301.1| aspartyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 594

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 236/591 (39%), Positives = 345/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG++ + DVG  V L+GWV   R  GGIIF+D+RD  GI QVV +        + A
Sbjct: 9   RTKYCGEVSLEDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+RSE+ + + G+V  R  ET+N  I TG++E+ A ++ I + +E  P P+       E
Sbjct: 69  DSLRSEYCIGVRGIVEKRPPETVNPKIKTGEVEVRATELRIFNKSETPPFPIEEGINVNE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + +N++ R ++   +R  +    FIE  TP+LT S+PEGARD+LV
Sbjct: 129 AVRLKYRYLDLRRPNMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQ +KQLLM +GFDRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 189 PSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ DD++   E +L+ +F E   G  +     R+ Y +A+ R+G+DKPD R  + + ++
Sbjct: 248 FVDVDDVIEINEKLLQTIFGEML-GIDLKLPLPRLTYKEAMERFGSDKPDTRFGMELVDI 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           T+   + EF+VFS   + N G  V AI AKG     +R   D + E+A++    GLA+I 
Sbjct: 307 TDIVKNCEFKVFSD--AANKGGSVRAINAKGCAATFSRREIDALVEFAKNFRAKGLAWIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D         P+ K L       I  RL  + GD   F A           + R  I
Sbjct: 365 VESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKDEIVFDVLGNLRLEI 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +++ + F   W+++FP +E++EEE +    H+PFT P          D   +K+ 
Sbjct: 420 ARKLNLLDKSKFNLLWVVEFPLFEYSEEEGRFVAKHHPFTSPMDEDIEFLETDPAKVKSK 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H  E+  + F  +G ++E  ++RFG L  AF+ G PPHGGIA
Sbjct: 480 AYDIVLNGTEIGGGSIRIHSPEIQKRMFKALGFTEERAQDRFGFLLEAFKYGTPPHGGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G DR+ MLLLG  ++R+   FP  ++    L  +PS V  +QLREL +++
Sbjct: 540 YGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590


>gi|313885986|ref|ZP_07819724.1| aspartate--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312924516|gb|EFR35287.1| aspartate--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 580

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/593 (40%), Positives = 343/593 (57%), Gaps = 17/593 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH+CG L  SD G  V L+GWV ++R  G + FLD+RD YGITQ+    D +   +  
Sbjct: 2   YRTHTCGALRASDEGQQVTLAGWVAKIRRMGAMTFLDLRDRYGITQIFF--DESHQGLLS 59

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V  EWVL + G V  RS  ++N  I TGQIE+ A ++E+L+ A+  P  +    +  + 
Sbjct: 60  EVGREWVLAVTGTVRLRS--SVNEKIPTGQIEILADRMEVLNRADTPPFTIEDVSDGGDD 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  +  NI  R R+    R  +   +F+E  TP+L  S+PEGARDF+VP
Sbjct: 118 LRMKYRYLDLRRRPVLSNIELRHRMTMETRRYLDGLHFLEIETPMLIGSTPEGARDFVVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+N G FYALPQ+PQ +KQLLM +G DRYFQI  CFRDED R+DR P EF Q+D EMSF
Sbjct: 178 SRMNPGQFYALPQSPQTFKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMSF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VEQDDIL+T E + + +F+E   G  +     R+ + +A+ RYG+DKPDLR  + +  VT
Sbjct: 237 VEQDDILSTFEGLAKHLFKEI-RGIDLPTPLRRMTWYEAMDRYGSDKPDLRFGMEIEEVT 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW- 361
           E      F V      V+    + AI   G     R   D++ ++ + + Q G   + W 
Sbjct: 296 ETIQGHGFGV------VDSAAYIGAIVVTGKADYTRKQIDQLTDFVK-RPQVGAKGLLWL 348

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R    G +       K L     +A+  +L MQ GD  F I+GD           R HIA
Sbjct: 349 RYQPDGTMK--SSFDKFLTADQLKALADKLSMQPGDIAFLISGDKRPAQKQLGTLRLHIA 406

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            ELG++    +E  W++DFP  EW+EE ++    H+PFT P+   +    +D  S++A  
Sbjct: 407 SELGLMKPGQYECLWVVDFPLLEWDEETQRYYAMHHPFTAPKPEDQDRLESDPGSVRADA 466

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H +E+  + F+ +G +KE  E +FG L  AF+ G PPHGGIA 
Sbjct: 467 YDMVINGVEVGGGSIRIHDAELQARVFAALGFTKERAEEQFGFLMNAFKYGAPPHGGIAF 526

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR V L+    ++R+   FP + +  D+++ +P+ +  EQL EL L + E 
Sbjct: 527 GLDRWVSLMAELDSIRDCIAFPKNNSGRDVMIDAPARLDPEQLDELHLTVRET 579


>gi|257888148|ref|ZP_05667801.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257824202|gb|EEV51134.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,141,733]
          Length = 589

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 237/592 (40%), Positives = 344/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+     +EIA
Sbjct: 4   RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEINKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G+V  R    +N  + TG+ E+ A +I IL+ A+  P  +  ++   +
Sbjct: 64  DKCRSEYVIEVTGVVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KNI  R     ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E   G  V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEV-RGIEVTLPFPRMTYDEAMARYGSDKPDTRFEMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E     EF+VF   +++  G  V A+ AKG     +R   D++ ++    G  GLA++ 
Sbjct: 302 SETVKEVEFKVFQ--MALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK +    TEAI    D + GD   F A       +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFMGEA-TEAIIKATDAEPGDLLMFGADKSEIVAAALGAIRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP+     L   D   + A 
Sbjct: 414 GKELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKAEYIPLLAEDPAKVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  +    +G +KE +E +FG L  A   G PPHGGIA
Sbjct: 474 AYDIVLNGYELGGGSIRIHTRELQEKVLKTLGFTKEQMEEQFGFLLTALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR  MLL G  N+REV  FP +    D++  +PS VS  QL EL + + 
Sbjct: 534 LGLDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585


>gi|168181744|ref|ZP_02616408.1| aspartate--tRNA ligase [Clostridium botulinum Bf]
 gi|237796510|ref|YP_002864062.1| aspartyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|259511853|sp|C3KTB6|SYD_CLOB6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|182675105|gb|EDT87066.1| aspartate--tRNA ligase [Clostridium botulinum Bf]
 gi|229260573|gb|ACQ51606.1| aspartate--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 593

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/596 (40%), Positives = 361/596 (60%), Gaps = 20/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+   +++G  V + GWV R R  GG+IF+D+RD  GI Q+V   +     FE +
Sbjct: 10  RTIMCGEPRENNIGEKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEKS 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +V+SE+ + + G ++ R  ++ N ++ TG +EL  + I+ILS +E  P+ +    +  E
Sbjct: 70  DNVKSEYCIAVTGEIVKR--QSPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDASE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + K  + R +    +R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 128 NVRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE+DD+++  E +L  VF+E + G  V     R+ Y  A+ +YG+DKPDLR  + ++++
Sbjct: 247 FVEEDDVIDLNEKLLAKVFKEVA-GIDVKLPIERMPYKIAMEKYGSDKPDLRFGMEINDL 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           TE   +SEF+VF    ++  G  V AI A+      R   D++ ++ ++    GLA+I +
Sbjct: 306 TEAVKNSEFKVFKG--AIEAGGSVRAIKAENCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP--LKFCSFAADARNH 419
           + DE  +     P+AK L     +AI  ++D + GD    I GD   + F S  A  R H
Sbjct: 364 KEDEIKS-----PIAKFLTEEEMKAILEKMDAKVGD-LILIVGDKNNVVFESLGA-LRLH 416

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL IIN + F F WI +FP   +NEEE +    H+PFT        L   D   ++A
Sbjct: 417 LAKELDIINKDEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIDLLDTDPGKVRA 476

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++  + FS +G +KE    RFG L  AF+ G PPHGG+
Sbjct: 477 KAYDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGL 536

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR++M L G +N+++V  FP +QN FC  L  +P+ V   QL ELG++ +E 
Sbjct: 537 AYGLDRMIMFLAGTENIKDVITFPKNQNAFCP-LTEAPNVVDENQLEELGIKKIEK 591


>gi|97196950|sp|Q48QS8|SYD_STRPM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 582

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/593 (39%), Positives = 352/593 (59%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++   
Sbjct: 3   RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++G V +R  +  N  + TG +EL    + IL+ A+  P  +  + E  
Sbjct: 63  AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +T      +F+VFS+  +V       AI  KG     +R   D++ E+A+  G  GLA  
Sbjct: 299 LTVTVNGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W     G +A  GPVAK L  + TE +  +L + + D   F+A D L+  +    A RN
Sbjct: 351 -WVKVTDGQLA--GPVAKFLIAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++
Sbjct: 406 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I
Sbjct: 526 LAIGLDRFVMLLAGKGNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 578


>gi|77918645|ref|YP_356460.1| aspartyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|97196766|sp|Q3A5R7|SYD_PELCD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|77544728|gb|ABA88290.1| aspartyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 596

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/590 (40%), Positives = 345/590 (58%), Gaps = 13/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           R+H CG +  +D G  V L GWV R R HGG+IF+D+RD  GI Q+  +PD        A
Sbjct: 10  RSHFCGSITAADTGKEVCLMGWVQRRRDHGGLIFIDLRDRQGIAQLALDPDRDPEAHAKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+V+ + G+V +R   T+N  + TG++E+  +++ +L+ AE  P  +    +  E
Sbjct: 70  ERVRNEYVVAVRGIVSARPEGTVNPKMATGEVEVEVKELRMLNGAETPPFLIEDNVDVAE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR K+R+LDLRR  L  N+V R ++   +R  +    FIE  TP+LT S+PEGARD+LV
Sbjct: 130 NIRLKHRYLDLRRPALQSNLVLRHKVAQIVRNYLNDTGFIEVETPVLTKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D E+S
Sbjct: 190 PSRVNPGMFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDCELS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++ DI++ ME ++  VF++   G  +S    RI Y +++ R+G D PD+R  + +  +
Sbjct: 249 FVDRQDIMDIMEAMIATVFQQIL-GIELSLPMPRITYTESMARFGVDNPDMRFDLELVEI 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           +       F+VF+   +V  G  V  + AK     +R   D + ++ +  G  GLAY+  
Sbjct: 308 SNIAKDCGFKVFAD--AVKKGGIVKLLNAKQCASFSRKEIDDLTDFVKIYGAKGLAYV-- 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNHI 420
           ++ E G  +   P+AK         I      + GD   F A D  K  + +    R H+
Sbjct: 364 KIQEDG--SWQSPIAKFFTEKEIALIDEAAGSEPGDLLLF-AADTFKVANESLGRLRGHL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            Q+LG+   + F F W+ DFP  EW+ E ++    H+PFT P     +L   D  S +A 
Sbjct: 421 GQKLGLARKDDFRFAWVTDFPLLEWDGEARRHVAVHHPFTAPLDEDIALLDGDPGSARAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG EI  G IR H  E+  + FS +GI+ E  E +FG L  A   G PPHGGIA
Sbjct: 481 AYDLVLNGSEIGGGSIRIHNREIQNKMFSLMGITAEEAEEKFGFLLGALSYGAPPHGGIA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G+DR++M+L G+ ++R+V  FP +Q    LL  +P  V  +QLREL +R
Sbjct: 541 FGLDRLMMILTGSDSIRDVIAFPKTQKATCLLSEAPGAVDDKQLRELSIR 590


>gi|301062998|ref|ZP_07203563.1| aspartate--tRNA ligase [delta proteobacterium NaphS2]
 gi|300442879|gb|EFK07079.1| aspartate--tRNA ligase [delta proteobacterium NaphS2]
          Length = 606

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/595 (38%), Positives = 344/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           R+H CG L   D+   + L GWV+R R  G +IF+D+RD  GITQVV +P  ++A  E A
Sbjct: 18  RSHDCGSLRQQDIDREIILMGWVNRRRDLGNLIFIDLRDREGITQVVFDPQVNAAAHEKA 77

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+EWVL + G V++R     N ++ TGQIE+ A +++IL+V E  P  V G  +  E
Sbjct: 78  HVLRNEWVLAVKGTVVARLEGQENRDLGTGQIEIRADEVKILNVTETPPFQVDGAVDASE 137

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+L+LRR  +  N  KR  I + +R  +    FIE  TP LT S+PEGARD+LV
Sbjct: 138 NLRLKYRYLELRRPQIFNNFKKRHAIASRIRTYLNERGFIEVETPFLTKSTPEGARDYLV 197

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQLLM SGFDRY+Q+  CFRDED R+DR P EF Q+D+EM+
Sbjct: 198 PSRVNTGMFYALPQSPQLFKQLLMMSGFDRYYQVVRCFRDEDLRADRQP-EFTQVDLEMA 256

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++ D+++  E ++  +F    +   +S+    + Y +A+ R+GTD+PDLR  + + N+
Sbjct: 257 FVDEKDVMDIFEGMMGELFTTIMDIE-LSSPIPHLTYQEAMDRFGTDRPDLRFDMELKNI 315

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++   +S+F+VF  +++     +   +       +R   D ++  A + G  GLA+I  +
Sbjct: 316 SDIAENSDFKVFKGVVAAGGMVKAICVKQAANTYSRKALDDISLVATASGAKGLAWI--K 373

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E+       P+ K  +     AI  RLD   GD    +A  P    +     R  +A 
Sbjct: 374 VSEN---TWQSPIGKFFDDEAKSAINTRLDAAPGDLILMVADQPRIANAAVGALRLEMAH 430

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              +IN + F F WI DFP  E+++E  +    H+PFT P          +   ++A  Y
Sbjct: 431 REELINKDRFSFVWITDFPLLEYDDESDRFVAVHHPFTAPVAQDIGFLKENPGKVRARAY 490

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG EI  G IR H ++     F  +GI      ++FG L  A + G PPHGG+A G
Sbjct: 491 DLVLNGSEIGGGSIRIHDAKTQEMVFDALGIPAREARSKFGFLIDALKHGAPPHGGMALG 550

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            DR+V ++ G +++RE+  FP + +    L  +PS V  +QL+ELGLRI +  +K
Sbjct: 551 FDRLVAIMTGVRSIREIIAFPKTTSGTCPLTDAPSPVDPDQLKELGLRISQAKEK 605


>gi|207092253|ref|ZP_03240040.1| aspartyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 577

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 224/589 (38%), Positives = 349/589 (59%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G V  R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGRVRLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+    G+T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQEIFKAI--GHTISTPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFIDSSNAIFSNIAQDPKNKRIKALNVKGADALFSRSTLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            DE       GP+ K L+    + I  R + Q GD  FF AGD      +    R  +A+
Sbjct: 358 EDEIK-----GPLVKFLSEKGLKNILERTNAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+    +++  D+  ++A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECEDMEEVEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  ++  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEKMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|145224367|ref|YP_001135045.1| aspartyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|189082105|sp|A4TBU4|SYD_MYCGI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145216853|gb|ABP46257.1| aspartyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
          Length = 590

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 242/596 (40%), Positives = 339/596 (56%), Gaps = 28/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT + G L  +D G  V L+GWV R R HGG+IF+D+RD  G++QVV   D A  E A  
Sbjct: 3   RTRTAGSLRPADAGQTVTLAGWVARRRDHGGVIFIDLRDASGVSQVVFR-DGAVLEQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + + G+V  R     NA+I TG++E++A  + +L  +  LP  +  +    E  
Sbjct: 62  LRSEFCVAVTGVVEIRPEGNANADIPTGEVEVNATSLTVLGESAALPFQL--DETAGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+     I  R+++  + R  +   +F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRREVPGNAIRLRSKVNAAARGVLAGHDFVEIETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + DD++   E VLR V+     G  +     RI Y DA+RR+G+DKPDLR  + +   TE
Sbjct: 239 DADDVMALSEEVLRAVWATI--GYDLPLPLPRISYADAMRRFGSDKPDLRFGLELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+   GG    R   D   E+A+ +G  GLAY+   +
Sbjct: 297 YFADTPFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G +   GPVAK+L       +   +    GD  FF AG      +     R  +A+ 
Sbjct: 348 GKDGEL--TGPVAKNLTDAERAGLTAHVGANPGDCVFFAAGTAKSARALLGATRIEVAKR 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473
           L +I+ + + F W++D+P +E   E     D A         H+ FT P    E+    D
Sbjct: 406 LDLIDPDAWAFTWVVDWPMFESAAEATASGDVAVGSGAWTAMHHAFTAPTPESEATFDTD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  +  YD+VCNG EI  G +R H  +V  + F+ +GIS+E  E++FG L  AF  G 
Sbjct: 466 PGSALSNAYDIVCNGNEIGGGSLRIHRRDVQERVFAMMGISQEEAEDKFGFLLEAFTFGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGGIA G DRIV LL G  ++REV  FP S    D L  +P+ ++ +Q +E G+
Sbjct: 526 PPHGGIAFGWDRIVALLAGLDSIREVIAFPKSGGGVDPLTEAPAPITAQQRKESGI 581


>gi|296270026|ref|YP_003652658.1| aspartyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296092813|gb|ADG88765.1| aspartyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 584

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/590 (40%), Positives = 340/590 (57%), Gaps = 23/590 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L +  VG  V L+GWV R R HGG++F+D+RD  G  QVV   +    E A  
Sbjct: 3   RTHEAGTLRIDHVGQRVTLAGWVARRRDHGGVVFIDLRDASGTVQVVFREE----EHAHD 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  + TG IE++A ++E+LS +  LP P+ G     E  
Sbjct: 59  LRAEYCVKVTGEVRRRPEGNENPELPTGDIEVAASEVEVLSESAPLPFPIEGSVNVSEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  + + +  R+R        M    F+   TP LT S+PEGARDFLVP 
Sbjct: 119 RLKYRYLDLRRQQVAEALKIRSRATYLAHEVMREHGFVYVETPNLTRSTPEGARDFLVPV 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G++YALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF Q+D EMSFV
Sbjct: 179 RLQPGNWYALPQSPQLFKQLLMVGGLERYYQLARCFRDEDLRADRQP-EFTQIDAEMSFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++DD++   E ++  +++E   G  +     R+ Y +A+ RYGTDKPDLR  + + ++TE
Sbjct: 238 DEDDVIAVAETLIGRIWKEIL-GYELPTPLPRMSYAEAMARYGTDKPDLRFGVELVDLTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  +EFRVF           V A+   GG    R   D   EWARS+G  GLAY+  + 
Sbjct: 297 YFKGTEFRVFQAPY-------VGAVVMPGGASQTRRELDGWQEWARSRGARGLAYVLVKE 349

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           D        GPVAK+L+      +      Q GD+ FF AG+P         AR  I + 
Sbjct: 350 D-----GLAGPVAKNLSERELSGLTAATGAQVGDAIFFSAGEPAAARELLGAARLEIGRR 404

Query: 424 LGIINCNCFEFCWIMDFPFYE--WNEEEKKIDFA--HNPFTMPQGGMESLKGNDLLSIKA 479
            G+I+ + + F W++D P +E  +++  ++I +   H+PFT P+        +      A
Sbjct: 405 CGLIDESKWSFLWVVDAPMFEPLYDDRGEQIGWTSVHHPFTAPKPEWADNFQDHPGEALA 464

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD++CNG EI  G IR H +E+  + F  +GISKE  E +FG L  AF+ G PPHGGI
Sbjct: 465 CAYDMICNGMEIGGGSIRIHRAEMQQRVFDVLGISKEEAETKFGFLLEAFKYGPPPHGGI 524

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G DRI MLL G +++R+V  FP + +  D L G+P+ ++ EQ +E G+
Sbjct: 525 AFGWDRICMLLAGGESIRDVIAFPKTASGYDPLTGAPTPITPEQRKEAGV 574


>gi|54297389|ref|YP_123758.1| aspartyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|62287532|sp|Q5X586|SYD_LEGPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|53751174|emb|CAH12585.1| Aspartyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 593

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/591 (39%), Positives = 347/591 (58%), Gaps = 8/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH C  +    +   + + GWVH  R HGG+IFLDIRD  G+ QVV  P++   F IA+
Sbjct: 2   RTHYCSAVNELSLDKQITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+V+ + G+V  R    IN  + TG++E+   ++EIL+ +   P      +   E 
Sbjct: 62  KLRSEFVVRVTGIVRKRPEGMINDKMETGRVEVIGIQLEILNQSPTPPFLPDDHQIINED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R+KYR++DLRR  + K +  R ++ + +R  +  +NF++  TP+LT ++PEGARD+LVP
Sbjct: 122 LRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF QLD+EM+F
Sbjct: 182 SRVHPGQFYALPQSPQLFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DIL  +E +L+ VF+E  N  T+ +   R+ Y +A+ RYG+DKPDLRNP+ + ++ 
Sbjct: 241 INEEDILQLIEGLLKVVFKEILN-ITLPDKLPRMSYKEAMTRYGSDKPDLRNPLELIDIA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F VF+   + N G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 300 DLVKDCDFNVFASAANDNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVN- 358

Query: 364 DESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           D S  +AG+  P+ K L+    ++I  R++ Q GD  FF A             RN +  
Sbjct: 359 DLSAGMAGLQSPILKFLSETAVQSILNRVEAQTGDVIFFGADKAHVVNESMGALRNKLGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +  +IN   ++  W++D+P +E + +  K+   H+PFT PQ    E+L+     ++ A  
Sbjct: 419 DRNLINPG-WQLLWVIDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTL-AKA 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+EI  G IR H  E+    F  +GI ++    +FG L  A Q G PPHGGIA 
Sbjct: 477 YDIVINGYEIGGGSIRIHQPELQKTVFDLIGIDEQEAHEKFGFLLDALQYGAPPHGGIAL 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR+ MLL  + ++R+V  FP +Q     L  +PS     QL ELG+R+ 
Sbjct: 537 GIDRLAMLLTDSTSIRDVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLA 587


>gi|153872335|ref|ZP_02001260.1| Aspartyl-tRNA synthetase [Beggiatoa sp. PS]
 gi|152071197|gb|EDN68738.1| Aspartyl-tRNA synthetase [Beggiatoa sp. PS]
          Length = 595

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 248/594 (41%), Positives = 356/594 (59%), Gaps = 11/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S +   V L GWVHR R HGG+IF+D+RD  G+ Q+V NP+ A  F  A+
Sbjct: 2   RSHYCGQLNESFIDKSVILCGWVHRRRDHGGVIFIDLRDREGLVQIVFNPEIAEAFATAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL I+G V  R  +T N ++ TGQ+E+  ++++IL+ AE  P  +  E    E 
Sbjct: 62  KVRSEYVLRIEGRVRHRPEDTENQDLATGQVEVVVEQVDILNAAETPPFQL-DESHINED 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR +YR++DLRR  +      R +I   MR  + +E F+E  TP+LT ++PEGARD+LVP
Sbjct: 121 IRLRYRYIDLRRPEMQARFQLRAQITRLMRQFLDSEGFLEIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 181 SRTHPGQFFALPQSPQLFKQLLMMSGMDRYYQIVRCFRDEDLRADRQP-EFTQLDIEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++  + N ME+++R +FE+  N   +   F  + Y +AIRR+GTDKPDLR P+ + ++ 
Sbjct: 240 IDESMLKNVMESMIRLLFEKVLNVE-LPEPFPSLSYAEAIRRFGTDKPDLRVPLELTDID 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + EF+VF+   + +P   V A+    G G +R   D    +    G  GLAYI   
Sbjct: 299 DLMANVEFKVFAGPAN-DPNGRVAALCVPNGKGLSRKQIDDYTGFVGIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+ K L     EA+  R     G S  F   D  K  + A  A R  IA
Sbjct: 358 DITAGRNGLQSPILKFLPDKAIEALLERTKAATG-SIIFFGADKAKVVNEALGALRLKIA 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAF 480
           ++L ++    ++  W++D+P +EW+E+EK+    H+PFT P    +E L+ +   S+ + 
Sbjct: 417 EDLKLVQ-KGWKPLWVIDYPMFEWDEKEKRWMSLHHPFTAPNIQDIEKLEAHPNQSL-SR 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H  E+    F  +GI +E  + +FG L  A + G PPHGGIA
Sbjct: 475 AYDMVLNGEEIGGGSIRIHRPEMQSAVFRILGIEEEEAQEKFGFLLEALKYGCPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR++ML+ GA ++REV  FP +Q    LL  +PS  S EQLR+L +R+  N
Sbjct: 535 FGLDRLIMLMSGANSIREVIAFPKTQTASCLLTSAPSAASPEQLRDLHIRLRAN 588


>gi|71904484|ref|YP_281287.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|71803579|gb|AAX72932.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 599

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/593 (39%), Positives = 352/593 (59%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++   
Sbjct: 20  RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 79

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++G V +R  +  N  + TG +EL    + IL+ A+  P  +  + E  
Sbjct: 80  AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 137

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 138 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 197

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 198 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 256

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++ +
Sbjct: 257 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 315

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +T      +F+VFS+  +V       AI  KG     +R   D++ E+A+  G  GLA  
Sbjct: 316 LTVTVNGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 367

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W     G +A  GPVAK L  + TE +  +L + + D   F+A D L+  +    A RN
Sbjct: 368 -WVKVTDGQLA--GPVAKFLIAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 422

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++
Sbjct: 423 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 482

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG
Sbjct: 483 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 542

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I
Sbjct: 543 LAIGLDRFVMLLAGKGNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 595


>gi|293571372|ref|ZP_06682403.1| aspartyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291608588|gb|EFF37879.1| aspartyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 589

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 236/592 (39%), Positives = 345/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+     +EIA
Sbjct: 4   RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G+V  R    +N  + TG+ E+ A +I IL+ A+  P  +  ++   +
Sbjct: 64  DKCRSEYVIEVTGIVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KNI  R     ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E   G  V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEV-RGIEVALPFPRMTYDEAMARYGSDKPDTRFEMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E     EF+VF   +++  G  V A+ AKG     +R   D++ ++    G  GLA++ 
Sbjct: 302 SETVKEVEFKVFQ--MALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK + +  TEAI    D + GD   F A       +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFM-VEATEAIIKATDAEPGDLLMFGADKSEIVAAALGAIRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP+     L   D   + A 
Sbjct: 414 GKELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKAEDIPLLAEDPAKVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  +    +G +KE +E +FG L  A   G PPHGGIA
Sbjct: 474 AYDIVLNGYELGGGSIRIHTRELQEKVLKTLGFTKEQMEEQFGFLLTALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR  MLL G  N+REV  FP +    D++  +PS VS  QL EL + + 
Sbjct: 534 LGLDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585


>gi|50915178|ref|YP_061150.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|50904252|gb|AAT87967.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 599

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/593 (39%), Positives = 351/593 (59%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++   
Sbjct: 20  RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 79

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++G V +R  +  N  + TG +EL    + IL+ A+  P  +  + E  
Sbjct: 80  AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 137

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 138 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 197

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 198 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 256

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++ +
Sbjct: 257 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 315

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +T      +F+VFS+  +V       AI  KG     +R   D++ E+A+  G  GLA  
Sbjct: 316 LTVTVKGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 367

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W     G +A  GPVAK L  + TE +  +L + + D   F+A D L+  +    A RN
Sbjct: 368 -WVKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 422

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++
Sbjct: 423 RIARDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 482

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG
Sbjct: 483 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 542

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL    N+REV  FP +    D +  +PS VS  QL EL L+I
Sbjct: 543 LAIGLDRFVMLLAEEDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 595


>gi|239501692|ref|ZP_04661002.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 592

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/599 (40%), Positives = 349/599 (58%), Gaps = 17/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R   T N N+++GQIE+  ++IE+L+ +E  P P+  +     E
Sbjct: 63  KARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLD+RR  + + +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EHRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F +          F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLNDDDIMDLMEGMTVKLFNDLL--GVKFEKFRRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   + A+   G G   R+  D   ++    G  GLAYI  
Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIAALRVPGAGSLTRSQIDEYTKFVGIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              E G      P+ K +  +  + +  R+  ++GD  FF   D  K  + A  A R  I
Sbjct: 359 NEIEKGIEGLQSPIVKFIEPIVMQLLE-RVGAENGDIVFF-GADKAKIVNDAMGALRVKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478
             +L +  C  +   W++DFP +E  ++ K     H+PFT+P+  +E +K N  + LS+ 
Sbjct: 417 GHDLNLATCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEDVKSNPGEALSVA 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG
Sbjct: 475 ---YDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E  KK
Sbjct: 532 LAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQQKK 590


>gi|146306300|ref|YP_001186765.1| aspartyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166225377|sp|A4XRR7|SYD_PSEMY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145574501|gb|ABP84033.1| aspartate--tRNA(Asn) ligase [Pseudomonas mendocina ymp]
          Length = 591

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/595 (40%), Positives = 352/595 (59%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLDGQEITLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRAETFAKAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R A  +N N+ +G IE+   ++++L+ AE  P P+    +  E 
Sbjct: 63  RVRSEYVVKITGKVRLRPAGAVNPNMASGAIEVLGYELDVLNEAETPPFPLNEYTDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI +S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLKLRSRITSSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI++  E ++R +F+E             +   +A+RR+G+DKPDLR P+ + +V 
Sbjct: 242 LDEKDIMDITETMVRNLFKEVL--GVEFGELPHMPLAEAMRRFGSDKPDLRIPLELVDVE 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF+   + +P   V A+   GG    R   D   ++    G  GLAYI   
Sbjct: 300 DQLKDVEFKVFAGPAN-DPKCRVTALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+ K++ + N   I  R+   DGD  FF A D  K  S A  A R  + 
Sbjct: 359 ERAAGVDGLQSPIVKNIPLDNINVILDRVGAVDGDIVFFGA-DKAKIVSEALGALRIKLG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L ++ C  +   W++DFP +E N ++  +   H+PFT P+   E L+ N   ++ +  
Sbjct: 418 HDLNLLTCE-WAPLWVVDFPMFEEN-DDGSLTAMHHPFTSPKCTPEDLEANPAAAL-SRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H   +    F  +GIS++  + +FG L  A + G PPHGG+A 
Sbjct: 475 YDMVLNGTELGGGSIRIHDKAMQQTVFRVLGISEDEQQEKFGFLLDALKYGAPPHGGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA ++REV  FP +Q+   ++  +P  V  + LREL +R+ E  K
Sbjct: 535 GLDRLVMLMTGASSIREVIAFPKTQSAACVMTQAPGVVDAKSLRELHIRLREQAK 589


>gi|227552624|ref|ZP_03982673.1| aspartate--tRNA ligase [Enterococcus faecium TX1330]
 gi|257896961|ref|ZP_05676614.1| aspartyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293378683|ref|ZP_06624842.1| aspartate--tRNA ligase [Enterococcus faecium PC4.1]
 gi|227178250|gb|EEI59222.1| aspartate--tRNA ligase [Enterococcus faecium TX1330]
 gi|257833526|gb|EEV59947.1| aspartyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|292642723|gb|EFF60874.1| aspartate--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 589

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 237/592 (40%), Positives = 344/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+     +EIA
Sbjct: 4   RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEINKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G+V  R    +N  + TG+ E+ A +I IL+ A+  P  +  ++   +
Sbjct: 64  DKCRSEYVIEVTGVVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KNI  R     ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E   G  V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEV-RGIEVTLPFPRMTYDEAMARYGSDKPDTRFEMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E     EF+VF   +++  G  V A+ AKG     +R   D++ ++    G  GLA++ 
Sbjct: 302 SETVKEVEFKVFQ--MALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK +    TEAI    D + GD   F A       +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFMGEA-TEAIIKATDAEPGDLLMFGADKSEIVAAALGAIRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP+     L   D   + A 
Sbjct: 414 GKELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKAEDIPLLAEDPAKVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  +    +G +KE +E +FG L  A   G PPHGGIA
Sbjct: 474 AYDIVLNGYELGGGSIRIHTRELQEKVLKTLGFTKEQMEEQFGFLLTALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR  MLL G  N+REV  FP +    D++  +PS VS  QL EL + + 
Sbjct: 534 LGLDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585


>gi|325982635|ref|YP_004295037.1| aspartyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325532154|gb|ADZ26875.1| aspartyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 595

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/590 (39%), Positives = 348/590 (58%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V L GWVHR R HGG+IF+D+RD  G+ QVV +PD+   F+ A+
Sbjct: 2   RTNYCGAINTEYLDKTVTLFGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDNVETFQTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+VL I G V  R   TIN ++++G+IE+    IE+L+ +   P  +  +    E 
Sbjct: 62  KIRNEYVLKITGRVRRRPEGTINTSLVSGEIEILVAAIEVLNASLTPPF-LMDDDNISEV 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R ++R+LDLRR  +  N+  R ++  ++R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLEHRYLDLRRPAMQSNLRLRHKVAMAVRVFLDQHGFLDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVNAGHFFALPQSPQLFKQLLMVSGFDRYYQITRCFRDEDLRADRQP-EFTQIDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I++ ME ++RG+F+  SN + + N F R+ Y +A+ +YG+DKPDLR P+    +T
Sbjct: 240 LSENEIMSLMEEMIRGLFKNVSNVD-LPNPFPRLTYAEAMFKYGSDKPDLRIPLEFTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +      F+VF +  +  P   V A+    GG  +R   D    +    G  GLAYI   
Sbjct: 299 DIMKEVPFKVFREA-AEKPDGRVAALRVPNGGELSRKEIDDYTAFVAIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K L     + +  R   +DGD  FF   D  K  + +  A R  + 
Sbjct: 358 CLSEGLEGLQSPILKFLPESTIQTVLARTRARDGDLIFF-GADKAKIVNESLGALRIKVG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
              G      ++  W++DFP +E +EEE +    H+PFT P  G E L   D     +  
Sbjct: 417 HRHGHAEAE-WKPLWVVDFPMFERDEEENRWQALHHPFTSPADGHEDLLETDPGQALSKA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R H  +V  + F  + IS++  + +FG L +A Q G PPHGGIA 
Sbjct: 476 YDMVLNGSEIGGGSVRIHRQDVQSKVFRALNISEQEAQEKFGFLLQALQYGAPPHGGIAF 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DRI+ ++ G++++R+V  FP +Q    LL  +PSTV  +QL+EL +R+
Sbjct: 536 GLDRILTMMTGSESIRDVIAFPKTQRAQCLLTHAPSTVDEKQLKELNIRL 585


>gi|118496744|ref|YP_897794.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|118422650|gb|ABK89040.1| aspartyl-tRNA synthetase [Francisella novicida U112]
          Length = 592

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 228/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 4   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 64  LRSEFVIKAEGVVNLRPEGQENKNIASGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 123

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 124 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 183

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 184 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 242

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E + G   +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 243 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 301

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 302 DMQNEEFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 361 SLSQGKDGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 420

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E  +++ ++   H+PFT P+   +E L   +   + +  
Sbjct: 421 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS E    +FG +  A   G P HGGIA 
Sbjct: 478 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ +
Sbjct: 538 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 587


>gi|312143968|ref|YP_003995414.1| aspartyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904619|gb|ADQ15060.1| aspartyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 591

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/590 (39%), Positives = 343/590 (58%), Gaps = 13/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG++   +    + + GWV + R HGG+IF DIRD  GI QVV NPD     F  A
Sbjct: 10  RTHLCGEISKKNESQEIIIMGWVQKRRDHGGVIFADIRDRSGIIQVVFNPDIGEESFSKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+V+ + G V  R    IN +I TG+IE+  Q++ IL  A+  P+ V  + +  E
Sbjct: 70  DQLRSEYVVAVKGEVELRPEGNINPDIYTGEIEIKCQELRILDKAKTPPIQVEDDIDAGE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + + +  R +I  + R  +    F E  TPILT S+PEGARD+LV
Sbjct: 130 DIRLKYRYLDLRRPKMTQIVGLRHKITKATRDYLDQNGFWEIETPILTKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G F+ALPQ+PQ +KQLLM SG +RYFQIA CFRDED R++R P EF Q+DMEMS
Sbjct: 190 PSRVNPGQFFALPQSPQIFKQLLMVSGMERYFQIARCFRDEDLRANRQP-EFTQIDMEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV ++D+      +++ +F E      V +   ++ Y +A+ R+GTDKPDLR  + + ++
Sbjct: 249 FVNREDVFEITNGLMKKIFAEVD--IDVPDKIKKMSYQEAMERFGTDKPDLRFGMELKDL 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIFW 361
           +    +S F +FS   +V  G +V  I  KGG   +R+  D   E  +     GLA+I  
Sbjct: 307 SPIVENSNFNIFSG--TVKSGGQVKGINYKGGADSSRSIIDNFEEHVKLFKAKGLAWIAL 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R  E  +     P+AK L+    + I  +++ ++GD    +A       +  ++ R  IA
Sbjct: 365 RDGELKS-----PIAKFLSKEELDNILTKMNAEEGDLLLIVADKASIVANALSNLRLKIA 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++  +I    ++F WI+DFP +E++EEE      H+PF  P          D  S++A  
Sbjct: 420 KDFDLIPSEVYKFVWIIDFPLFEYDEEEDCFQSKHHPFAAPVDEDIDKLEKDPASVRADA 479

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR +   +  + FS + +S++  + +FG L  AF  G PPHGGIA 
Sbjct: 480 YDLVLNGEELGGGSIRINNRPLQQKVFSVLSMSEKEQQEKFGFLLEAFDYGTPPHGGIAF 539

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++M+     ++R+V  FP +Q    LL  +PS VS +QL+ELGL +
Sbjct: 540 GMDRLMMITARTDSIRDVIAFPKTQRATSLLTNAPSKVSKKQLKELGLSL 589


>gi|169794766|ref|YP_001712559.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|184159464|ref|YP_001847803.1| aspartyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213157906|ref|YP_002320704.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215482310|ref|YP_002324492.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|260557129|ref|ZP_05829345.1| aspartyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|301347109|ref|ZP_07227850.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301510404|ref|ZP_07235641.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301597043|ref|ZP_07242051.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|332852216|ref|ZP_08434021.1| aspartate--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332870438|ref|ZP_08439202.1| aspartate--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332876305|ref|ZP_08444080.1| aspartate--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|226735095|sp|B7GWN1|SYD_ACIB3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226735096|sp|B7I8M5|SYD_ACIB5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238688027|sp|B0V550|SYD_ACIBY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238690995|sp|B2HYL7|SYD_ACIBC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169147693|emb|CAM85556.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|183211058|gb|ACC58456.1| Aspartyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213057066|gb|ACJ41968.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213986159|gb|ACJ56458.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|260409235|gb|EEX02537.1| aspartyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|322509377|gb|ADX04831.1| aspS [Acinetobacter baumannii 1656-2]
 gi|323519401|gb|ADX93782.1| aspartyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332729346|gb|EGJ60686.1| aspartate--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332732175|gb|EGJ63443.1| aspartate--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332735577|gb|EGJ66629.1| aspartate--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 592

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/599 (40%), Positives = 349/599 (58%), Gaps = 17/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R   T N N+++GQIE+  ++IE+L+ +E  P P+  +     E
Sbjct: 63  KARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLD+RR  + + +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EHRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F +          F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLNDDDIMDLMEGMTVKLFNDLL--GVKFEKFRRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   + A+   G G   R+  D   ++    G  GLAYI  
Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIAALRVPGAGSLTRSQIDEYTKFVGIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              E G      P+ K +  +  + +  R+  ++GD  FF   D  K  + A  A R  I
Sbjct: 359 NEIEKGIEGLQSPIVKFIEPIVMQLLE-RVGAENGDIVFF-GADKAKIVNDAMGALRVKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478
             +L +  C  +   W++DFP +E  ++ K     H+PFT+P+  +E +K N  + LS+ 
Sbjct: 417 GHDLNLATCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEDVKSNPGEALSVA 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG
Sbjct: 475 ---YDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E  KK
Sbjct: 532 LAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQQKK 590


>gi|62287533|sp|Q5X9E6|SYD_STRP6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 582

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/593 (39%), Positives = 351/593 (59%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++   
Sbjct: 3   RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++G V +R  +  N  + TG +EL    + IL+ A+  P  +  + E  
Sbjct: 63  AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +T      +F+VFS+  +V       AI  KG     +R   D++ E+A+  G  GLA  
Sbjct: 299 LTVTVKGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W     G +A  GPVAK L  + TE +  +L + + D   F+A D L+  +    A RN
Sbjct: 351 -WVKVTDGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++
Sbjct: 406 RIARDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL    N+REV  FP +    D +  +PS VS  QL EL L+I
Sbjct: 526 LAIGLDRFVMLLAEEDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 578


>gi|194324051|ref|ZP_03057826.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|194321948|gb|EDX19431.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
          Length = 590

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 228/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 2   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 62  LRSEFVIKAEGVVNLRPEGQENKNIASGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E + G   +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 241 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 300 DMQNEEFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 359 SLSQGKDGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E  +++ ++   H+PFT P+   +E L   +   + +  
Sbjct: 419 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS E    +FG +  A   G P HGGIA 
Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ +
Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 585


>gi|229545447|ref|ZP_04434172.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256853485|ref|ZP_05558855.1| aspartyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|307295914|ref|ZP_07575746.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|229309363|gb|EEN75350.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256711944|gb|EEU26982.1| aspartyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|306496245|gb|EFM65824.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|315028896|gb|EFT40828.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX4000]
          Length = 589

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/592 (40%), Positives = 349/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+ +   +EIA
Sbjct: 4   RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    +
Sbjct: 64  DKCRSENVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    EN+L  V +E + G  +S  F R+ YD+A+ RYG+DKPD R  + + +V
Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMSYDEAMARYGSDKPDTRFAMELIDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            +     +F+VF   L  N G+ V A+ AKG     +R   D + ++    G  GLA++ 
Sbjct: 302 ADVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK L  V+ E I    + + GD   F A  P    +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFLTEVSDELI-AATNAEVGDILMFGADKPEIVAAALGAVRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+    +    D  S+ A 
Sbjct: 414 GKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA
Sbjct: 474 AYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 534 LGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|169632443|ref|YP_001706179.1| aspartyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|238688247|sp|B0VRC7|SYD_ACIBS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169151235|emb|CAO99921.1| aspartyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 592

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/599 (40%), Positives = 348/599 (58%), Gaps = 17/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R   T N N+++GQIE+  ++IE+L+ +E  P P+  +     E
Sbjct: 63  KARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLD+RR  +   +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EHRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F +          F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLNDDDIMDLMEGMTVKLFNDLL--GVKFEKFRRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   + A+   G G   R+  D   ++    G  GLAYI  
Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIAALRVPGAGSLTRSQIDEYTKFVGIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              E G      P+ K +  +  + +  R+  ++GD  FF   D  K  + A  A R  I
Sbjct: 359 NEIEKGIEGLQSPIVKFIEPIVMQLLE-RVGAENGDIVFF-GADKAKIVNDAMGALRVKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478
             +L +  C  +   W++DFP +E   ++ K    H+PFT+P+  +E +K N  + LS+ 
Sbjct: 417 GHDLNLATCE-WAPLWVVDFPMFE-EADDGKWTSVHHPFTLPKSSVEDVKSNPGEALSVA 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG
Sbjct: 475 ---YDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E  KK
Sbjct: 532 LAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQQKK 590


>gi|160893491|ref|ZP_02074276.1| hypothetical protein CLOL250_01042 [Clostridium sp. L2-50]
 gi|156864886|gb|EDO58317.1| hypothetical protein CLOL250_01042 [Clostridium sp. L2-50]
          Length = 601

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 237/592 (40%), Positives = 351/592 (59%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           R+H C ++  +  G  V + GWV + R  GGIIF+D+RD  GI Q++   +   S CFE 
Sbjct: 10  RSHRCAEVSNALEGQKVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEESKCGSECFEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  ++SE+V  I+G V  R+   +N N+ TG IE+ A  + ILS AE  P P+    +  
Sbjct: 70  ATKLKSEYVAAIEGTVCKRAG-AVNENLTTGDIEVVATSLRILSEAETPPFPIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L +N+V +++++   R  M  E F+E  TP+L  S+PEGARD+L
Sbjct: 129 EELRLKYRYLDLRRPDLQRNLVMKSKVMTIARQFMANEGFLEIETPMLCKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ G+FYALPQ+PQ YKQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRIHPGTFYALPQSPQIYKQLLMCSGYDRYFQIARCFRDEDLRADRQP-EFTQMDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L  +F+E  + + V     R+ + +A+ R+G+DKPDLR  + + +
Sbjct: 248 SFVDVDDVIDVNERLLAKLFKEILDVD-VQLPIRRMTWIEAMNRFGSDKPDLRFGMELKD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +++      F VF+  L    G  V  I AKG G   R   D + E+A++ G  GLAYI 
Sbjct: 307 ISDVVKGCGFGVFTGAL--ENGGSVRGINAKGQGAMPRKKIDALVEFAKTYGAKGLAYIV 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             ++E G        AK +       I   L  + GD   F A             R H+
Sbjct: 365 --INEDGTYK--SSFAKFMTEDEMNNIVAALSGEPGDLLLFAADKNKVVWDTLGALRCHL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++G+++ N FEF WI +FP  EW++E+ +    H+PFTMP     ++   D   ++A 
Sbjct: 421 AEQMGLLDKNVFEFVWITEFPLLEWSDEQNRFTAMHHPFTMPMEEDLAIIDTDPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H  ++  + F  +G ++E    RFG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIHQDDIQEKMFECLGFTREQAYERFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VML+    ++R+V  FP  ++   L+  +P  V  +QL+ELG+ I 
Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASCLMTNAPDYVDEDQLKELGIDIT 592


>gi|154508879|ref|ZP_02044521.1| hypothetical protein ACTODO_01390 [Actinomyces odontolyticus ATCC
           17982]
 gi|293192667|ref|ZP_06609621.1| aspartate--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|153798513|gb|EDN80933.1| hypothetical protein ACTODO_01390 [Actinomyces odontolyticus ATCC
           17982]
 gi|292820174|gb|EFF79171.1| aspartate--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 609

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/607 (40%), Positives = 344/607 (56%), Gaps = 33/607 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G LG   VG  V L+GWV R R HGG+ F+D+RD  GI QVV   +     +A  
Sbjct: 11  RTHNIGTLGTDLVGQTVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVVRDE----RVAHE 66

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----Y 120
           +RSE+VL + G V +R     N ++ TG IE+    IEIL+ +  LP  V    E     
Sbjct: 67  LRSEFVLKVTGEVCARPEGNENPHLATGAIEVMGDDIEILNTSAPLPFQVSSNAEDSGNV 126

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR+     I  R+++  + R  + A +F+E  TP LT S+PEGARDF
Sbjct: 127 GEETRLKYRYLDLRREPEQYAIRLRSKVSRAAREALYARDFVEIETPTLTRSTPEGARDF 186

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R++ GS+YALPQ+PQ +KQLLM +G +RYFQIA C+RDED R+DR P EF QLD+E
Sbjct: 187 IVPARLSPGSWYALPQSPQLFKQLLMVAGMERYFQIARCYRDEDFRADRQP-EFTQLDIE 245

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++   E+VL+ V+     G  +S    R+ Y DA+ RYG+DKPDLR  + + 
Sbjct: 246 MSFVDQDDVIEVAEDVLKNVWALI--GYDLSTPIPRMTYKDAMERYGSDKPDLRFGLELT 303

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +TE+F  + FRVF       P      +P  G    R F D+  EWA+++G  GLAY+ 
Sbjct: 304 ELTEYFKDTTFRVFQA-----PYVGAVVMPGGGSQPRRTF-DKWQEWAKARGAKGLAYV- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +   GPVAK++     E +        GD  FF AG P         AR  I
Sbjct: 357 -TIAEDGTLG--GPVAKNITEAEREGLAAATGANPGDCIFFAAGKPTPSRELLGAARLEI 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLK 470
            +   +I+ + + F W++D P ++   + E + D A         H+ FT P+       
Sbjct: 414 GKRCDLIDPDAWAFTWVVDAPLFKPTGDAEAEGDVALGHSAWTAVHHAFTSPKPEWVDSF 473

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  +  A+ YD+VCNG EI  G IR H  ++  + F+ +GI +E  + +FG L  AF+
Sbjct: 474 DKDPGNALAYAYDIVCNGNEIGGGSIRIHRRDIQNRVFNVMGIGEEEAQTQFGFLLDAFK 533

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGG+A G DRIV LL  + ++R+V  FP S    D L  +P+ ++  Q +E G  
Sbjct: 534 YGAPPHGGVAFGWDRIVSLLTKSDSIRDVIAFPKSGGGFDPLTEAPAPITPAQRKEAG-- 591

Query: 591 IVENPKK 597
           +   PKK
Sbjct: 592 VDAKPKK 598


>gi|217964334|ref|YP_002350012.1| aspartyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|254781738|sp|B8DHM9|SYD_LISMH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|217333604|gb|ACK39398.1| aspartyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307571100|emb|CAR84279.1| aspS [Listeria monocytogenes L99]
          Length = 591

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/594 (39%), Positives = 339/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I    E++L  V +E  N  T+   F R+ Y +A+ R+G+DKPD+R  + + NV
Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           ++     +F+VF    ++  G EV AI AK    N  R   D +  +  + G  GLA   
Sbjct: 302 SDVVKDVDFKVFQS--AIENGGEVKAINAKSAAANFSRKDLDALGVFVANYGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E+  +   GP+AK         ++  L  +DGD   F A       +     RN +
Sbjct: 357 WLKVEASELK--GPIAKFFPEDKAADLKAALQAEDGDLLLFAADKADIVAASLGALRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A 
Sbjct: 415 GKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA
Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+ 
Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSAAQLAELKLETVKK 588


>gi|323693062|ref|ZP_08107281.1| aspartyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
 gi|323502816|gb|EGB18659.1| aspartyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
          Length = 598

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/597 (38%), Positives = 354/597 (59%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           R+H C +L  +++G  V + GWV + R  GGIIF+D+RD  GI Q++   ++  +  F  
Sbjct: 10  RSHRCTELSTANIGETVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEESDCGAGSFAK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ + G V +RS   +N N+ TG+IE+ A  + +L+ AE  P P+       
Sbjct: 70  AERLRSEFVVAVTGKVEARSG-AVNGNLKTGEIEIRANSLRVLAEAETPPFPIEENSRTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L +N++ R+R+    R  +  E F+E  TP L  S+PEGARD+L
Sbjct: 129 EELRLKYRYLDLRRPDLQRNLMIRSRVAILTRKFLAEEGFLEIETPTLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ  KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGEFYALPQSPQLLKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ +D+L+  E +L+ +F+E  + + +     R+ + +A+ R+G+DKPDLR  + + N
Sbjct: 248 SFVDVEDVLDVNERLLKTLFKEICDYD-LQLPIQRMTWREAMERFGSDKPDLRFGMELKN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V++     +F VF   L    G  V  I A+G G   R   D + E+A+  G  GLAY+ 
Sbjct: 307 VSDTVKDCQFVVFKGAL--ENGGSVRGINAEGQGAMPRKKIDALVEYAKGFGAKGLAYLA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D S   +     AK +     EA+   +D + GD   F A           + R  +
Sbjct: 365 IQEDGSYKSS----FAKFMTEEELEALVRAMDGKPGDLLLFAADKDKVVFDVLGNLRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L ++  + F F W+ +FP +E++EE+ +    H+PFTMP      L   D  +++A 
Sbjct: 421 ARQLDLLKKDDFRFLWVTEFPLFEYSEEDGRYVAVHHPFTMPMEEDLPLIDTDPGAVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H ++V  +    +G + E    +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTEMGGGSVRIHQADVQSKMLEVLGFTAERANEQFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G DR+VML++GA ++R+V  FP  ++   L+M +P+ V  +QL EL + +    +K
Sbjct: 541 YGFDRMVMLMVGADSIRDVIAFPKVKDASCLMMEAPAAVDEKQLEELSIAVAVAAEK 597


>gi|269217250|ref|ZP_06161104.1| aspartate--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269129387|gb|EEZ60472.1| aspartate--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 592

 Score =  425 bits (1093), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/602 (39%), Positives = 358/602 (59%), Gaps = 24/602 (3%)

Query: 1   MHRYRTH--SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           ++ Y  H  +CG L  +D G+ V L GW    R HGG+IF+D+RD  G TQVV +PD   
Sbjct: 5   LNEYSMHDRTCGQLRAADAGASVVLCGWAWHTRDHGGLIFIDLRDREGYTQVVVDPDCVS 64

Query: 59  ---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
              F  A+ +  E+VL + G V +R+AE +N ++ TG+IE+ A  IE+L+ +   P  + 
Sbjct: 65  AEDFAKAEHLGREYVLKVAGTVRTRAAEAVNPDMPTGEIEVLASAIEVLNTSVTPPFSIE 124

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
              E  E+ R K+R++DLRR  ++ +I  R  +  +MR  +    FIE  TPIL  S+PE
Sbjct: 125 DGIETDETTRMKWRYMDLRRPEMYASIKLRHIVAQAMRSALNERGFIEVETPILANSTPE 184

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARD+LVPSR N G FYALPQ+PQQ+KQ+LM  G +RY+QIA CFRDED R+DR P EF 
Sbjct: 185 GARDYLVPSRPNPGRFYALPQSPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQP-EFT 243

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTDKPDL 293
           Q+D+EMSFVE+ D+++ ME    GVF+E      V + F   R+ + +A+ R+G D+PD+
Sbjct: 244 QVDIEMSFVEETDVMDMME----GVFKEVLAAAGVEHAFPLTRMPWKEAMDRFGCDRPDV 299

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQG 352
           R  + + ++T+      F VFSK  +V  G  V  I AKG G  +R   +++ + A   G
Sbjct: 300 RFGMELVDLTDIVAGCGFGVFSK--AVEAGGVVKCINAKGAGDWSRGEIEKLAKVASDNG 357

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
             G+A+I +  D         P+ K L      AI+    ++ GD   F A D     S 
Sbjct: 358 AKGMAWIAYTADGKEK----SPIIKFLGDEVHAAIKEAAGVEPGDLLLF-AADSFDIASA 412

Query: 413 AADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLK 470
              A R H+A  LG I+       W++DFP ++++E+EKK    H+PFTM P+   + ++
Sbjct: 413 VLSALRLHMADALG-IDREGHALLWVVDFPMFKFDEDEKKYAAEHHPFTMIPREDWDKIE 471

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D L+  ++ YD+V +GFE+  G IR H +E+  +  +  G+  E +E +FG L  A +
Sbjct: 472 -TDPLACGSYSYDIVMDGFEMGGGSIRIHDAELQKRVLARCGVDDEDMERKFGHLIHALE 530

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR+VMLL G +++R+V  FP + +  D + G+PS VS  QL+++ LR
Sbjct: 531 LGAPPHGGIALGLDRLVMLLAGKQSIRDVIAFPKTSSAADPMTGAPSAVSGRQLKDVSLR 590

Query: 591 IV 592
           ++
Sbjct: 591 LL 592


>gi|195978983|ref|YP_002124227.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|238689789|sp|B4U0K5|SYD_STREM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|195975688|gb|ACG63214.1| aspartyl-tRNA synthetase AspS [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 582

 Score =  425 bits (1093), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/594 (38%), Positives = 358/594 (60%), Gaps = 25/594 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++   
Sbjct: 3   RSMYAGHVREEHIGRTIVLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEDVSGDVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++G V +R  +  N  + TG +EL    + IL+ A+  P  +    E  
Sbjct: 63  AERLRSEYVIEVEGSVEAR--QQANDKLATGAVELKVSGLTILNTAKTTPFEIKDGVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R +YR+LDLRR  + ++   R +  + +R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDMRLRYRYLDLRRPEMLESFKLRAKTTHVIRNYLDNLGFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRISQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V ++ + G  V   F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKD-TKGIEVKLPFPRMAYDDAMNHYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +T+     +F+VFS+  +V       AI  KG   +  R   D++ E+A+  G  GLA++
Sbjct: 299 LTDLVKEVDFKVFSEAQAVK------AIVVKGHADDYSRKDIDKLTEFAKQFGAKGLAWL 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARN 418
                +  + A  GP+AK L  V ++ +   L ++  D   F+A D L+  +      R 
Sbjct: 353 -----KVVDGAFTGPIAKFLTGVESK-LTESLQLEHNDLVLFVA-DTLEVANNTLGTLRT 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSI 477
            IA+EL +I+ + F F W++D+P +EW+EEE++   AH+PFT+P Q     L+G DL  +
Sbjct: 406 RIAKELDMIDMSQFHFLWVVDWPMFEWSEEEERYMSAHHPFTLPTQESAHELEG-DLAKV 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  ++  + F  +G +KE   ++FG L  A + G PPHG
Sbjct: 465 RAVAYDIVLNGYELGGGSLRINQKDMQERMFKALGFTKEEASDQFGFLLEAMEYGFPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR+VMLL G  N+REV  FP +    D +  +PS VS +QL EL L+I
Sbjct: 525 GLAIGLDRLVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEKQLEELQLQI 578


>gi|260548803|ref|ZP_05823025.1| aspartyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260407971|gb|EEX01442.1| aspartyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 594

 Score =  425 bits (1093), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/598 (40%), Positives = 350/598 (58%), Gaps = 17/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R   T N N+++GQIE+  ++IE+L+ +E  P P+  +     E
Sbjct: 63  KARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLD+RR  + + +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EHRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  D+I++ ME +   +F +          F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLNDDEIMDLMEGMTVKLFNDLL--GVKFEKFRRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   + A+   G G  +R+  D   ++    G  GLAYI  
Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIAALRVPGAGSLSRSQIDEYTKFVGIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              E G      P+ K +  +  + +  R+  ++GD  FF   D  K  + A  A R  I
Sbjct: 359 NEIEKGIEGLQSPIVKFIEPIVMKLLE-RVGAENGDIVFF-GADKAKVVNDAMGALRVKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478
             +L +  C  +   W++DFP +E  ++ K     H+PFT+P+  +E +K N  + LS+ 
Sbjct: 417 GHDLNLATCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEDVKSNPGEALSV- 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG
Sbjct: 474 --AYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G+DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PK
Sbjct: 532 LAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589


>gi|238685529|sp|A3M8Q6|SYD_ACIBT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|193078326|gb|ABO13300.2| aspartyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 592

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/599 (40%), Positives = 349/599 (58%), Gaps = 17/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R   T N N+++GQIE+  ++IE+L+ +E  P P+  +     E
Sbjct: 63  KARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLD+RR  + + +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EHRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F +          F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLNDDDIMDLMEGMTIKLFNDLL--GVKFEKFRRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   + A+   G G   R+  D   ++    G  GLAYI  
Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIAALRVPGAGSLTRSQIDEYTKFVGIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              E G      P+ K +  +  + +  R+  ++GD  FF   D  K  + A  A R  I
Sbjct: 359 NEIEKGIEGLQSPIVKFIEPIVMQLLE-RVGAENGDIVFF-GADKAKIVNDAMGALRVKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478
             +L +  C  +   W++DFP +E  ++ K     H+PFT+P+  +E +K N  + LS+ 
Sbjct: 417 GHDLNLATCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEDVKSNPGEALSVA 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG
Sbjct: 475 ---YDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E  KK
Sbjct: 532 LAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQQKK 590


>gi|78485235|ref|YP_391160.1| aspartyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|97196985|sp|Q31H87|SYD_THICR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78363521|gb|ABB41486.1| aspartyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 596

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/591 (40%), Positives = 354/591 (59%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG +        V +SGWVHR R HGG+IF+D+RD  G+ QVV NPD+A  F IA+
Sbjct: 3   RTHYCGQVTEILENQQVTVSGWVHRRRDHGGVIFIDLRDREGLVQVVVNPDNAEMFAIAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL ++G V +R+ ETIN  + TG+IE+ A+ +E+LS AE +P  +  ++   E 
Sbjct: 63  RVRSEYVLKVEGKVCARTPETINPKMNTGKIEIVAESLEVLSSAEPIPFQL-DDKHISEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R  YR+LDLRR+ +   +  R R+  SMR  +    F++  TPILT S+PEGARD+LVP
Sbjct: 122 VRLTYRYLDLRREEMQSTMRTRYRVTRSMRRYLDDNGFMDMETPILTKSTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR +   F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF QLD+E SF
Sbjct: 182 SRTHPNKFFALPQSPQLFKQLLMMSGFDRYYQITRCFRDEDLRADRQP-EFTQLDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++++N ME + + +F E  + N   ++F R+ Y +AI +YG D+PDLR P+ + +V 
Sbjct: 241 MTEEEVMNMMEGLTKTIFREGVDVN-FEDDFPRMTYAEAIEKYGIDRPDLRIPLQLVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF+   + +P   V A+   +GG  +R   D   ++    G  GLAYI   
Sbjct: 300 DLLQDIDFKVFAGP-AKDPMGRVAALRVPQGGKLSRKEIDDYTKYVGIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
            D S  + G+  P+ K       E ++ R+  +DGD  FF   D  K  + A  A R  I
Sbjct: 359 -DLSAGLDGLQSPIVKFFPDQAMEIMQ-RVGAEDGDIVFF-GADNAKIVNEALGALRCKI 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL-LSIKA 479
            ++L +I    +   W++DFP +E +E+  K+   H+PFT P+   E +  +D    + +
Sbjct: 416 GEDLDMIEKE-WAPVWVVDFPMFEMDEKTAKMTAIHHPFTQPKATTEEILNHDEPHQMLS 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG E+  G +R H + +       +GIS E  + +FG L  A + G PPH G+
Sbjct: 475 RAYDLVINGIEVGGGSVRIHDTHMQAAVLKMLGISDEDAQEKFGFLLNALKYGCPPHAGM 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           A G+DR+VML+    ++R+V  FP +Q+   +L  +P  V   QL +L LR
Sbjct: 535 AFGLDRLVMLMAKRDSIRDVIAFPKTQSAACMLTDAPGNVDNTQLADLELR 585


>gi|169629949|ref|YP_001703598.1| aspartyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|238688902|sp|B1MCH3|SYD_MYCA9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169241916|emb|CAM62944.1| Aspartyl-tRNA synthetase (AspS) [Mycobacterium abscessus]
          Length = 597

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 245/607 (40%), Positives = 342/607 (56%), Gaps = 30/607 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  S+ G  V L+GWV R R HGG+IF+D+RD  G+ QVV   D A  E A  
Sbjct: 3   RTHDAGSLRESNAGQRVTLAGWVARRRDHGGVIFIDLRDASGVAQVVFRED-AVLEQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R     N  I TGQIE++A ++++L+  E  PLP   +    E  
Sbjct: 62  LRAEFCVEVSGVVEVRPEGNANDEIATGQIEVNAAELKVLN--ESAPLPFQLDETAGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR+     I  R++   + R  +    F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLRYRYLDLRREGPGNAIRLRSKANAAARSVLSGHEFVEVETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E +L  +++    G  V     RI Y +A+RRYG+DKPDLR  + +   T+
Sbjct: 239 DQDDVIALAEEILVALWDLV--GYRVPTPIDRITYAEAMRRYGSDKPDLRFGLELVECTD 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+   GG    R   D   E+A+ +G  GLAY+   +
Sbjct: 297 YFSETSFRVFQAPY-------VGAVVMPGGADQPRRTLDGWQEFAKQRGHKGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPVAK+L+    + +   +    GD  FF AG      +     R  +AQ 
Sbjct: 348 GEDGTLG--GPVAKNLSDAERDGLAAHVGANPGDCIFFSAGAAKSSRALLGSVRGEVAQR 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473
           LG+I+ + + F W++D P +E  ++     D A         H+ FT P+   E+    D
Sbjct: 406 LGLIDPDAWAFTWVVDAPLFEPADDATAAGDVAVGSGAWTAVHHAFTSPKPESENTFDTD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  A+ YD+VCNG EI  G IR H  ++  + F  +GIS E  + +FG L  AF  G 
Sbjct: 466 PGSALAYAYDIVCNGHEIGGGSIRIHRRDIQERVFQVMGISNEDAQEKFGFLLDAFAFGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G DR+  LL G  ++REV  FP S    D L  +P+ ++  Q +E G  I  
Sbjct: 526 PPHGGIAFGWDRVTALLAGTSSIREVIAFPKSGGGVDPLTDAPAPITAAQRKESG--IDA 583

Query: 594 NPKKILK 600
            P+K  K
Sbjct: 584 KPEKAEK 590


>gi|219684410|ref|ZP_03539354.1| aspartyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219672399|gb|EED29452.1| aspartyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 586

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/594 (38%), Positives = 345/594 (58%), Gaps = 18/594 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+   +    +IA+
Sbjct: 2   FKVIKCNELNEKLINKKVEINAWVKKIRHHGKFIFLNIRDRYEQAQVLIT-EEHLLKIAE 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + I GL+  R    IN N+ TG  E+ A+ IEI+S   ELP  +  +    E+
Sbjct: 61  KIKLEYCIKIQGLLSKRPPNMINENMKTGSFEILAKNIEIISKCNELPFMIEDDNNASEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + +YR+LDLRRD+L   I+ R +  + +R  ++ +NF+E  TP    S+PEGARDF++P
Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLVKKNFLELETPTFVKSTPEGARDFVIP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++GSFYALPQ+PQ YKQLLM +GFD+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGSFYALPQSPQLYKQLLMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++++I   +EN+L  +F+   N   +   F +I Y  A+ +YG+DKPD R  + + +++
Sbjct: 240 VKKENIFKLIENMLFLIFKNCLNI-KLPKKFKKIAYKTAMNKYGSDKPDTRFELTLQDIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
            +  +SEF VF   L      ++  +  K    +RA  + + E A+     GL   F ++
Sbjct: 299 RNLKNSEFNVFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGL--YFTKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADARNHIAQ 422
           +   N    G +AK L     + I+    +++ D  FF A    +  C      R  IA 
Sbjct: 357 E---NNKFSGGIAKFLKTEEQQLIK-NYSLENNDIIFFTANKKWEAACKAMGQIRIKIAN 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMESLKGNDLLSIK 478
           +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+      +E      L  I 
Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYTPAHHIFSLPKKRYIASLEKTPNKTLGEI- 471

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YDLV NG E+ SG IR H  E+  + F+ +G  KE  E+RFG   +A + G P HGG
Sbjct: 472 ---YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGG 528

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IA GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV
Sbjct: 529 IAIGIDRLIMLMTKSTSIKDVILFPKNSLAASPLDDSPSKISDEQLKELGINIV 582


>gi|196228956|ref|ZP_03127822.1| aspartyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196227237|gb|EDY21741.1| aspartyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 609

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 238/595 (40%), Positives = 350/595 (58%), Gaps = 22/595 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACF 59
           YRTHSC  L  +D+G  V L+GWV+  R  GG+IF+D+RD  G+TQ+V     N D+   
Sbjct: 17  YRTHSCHQLRPADIGQSVTLAGWVNTNRDQGGVIFVDLRDREGVTQIVFRSEENADATVH 76

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A  +RSE V+ I G V +R   T NA + TG IE+ A  +++L+ A+  P P+  + +
Sbjct: 77  --AHKLRSEDVIQITGKVAARLPGTENAKLATGAIEIIATDLKVLNKADVPPFPL-DDPK 133

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LDLR D + +N+  R RI+ + R  +    F+E  TP+L+  +PEGARD
Sbjct: 134 VNEDLRLEYRYLDLRTDHMQRNLKLRHRIVKATRDYLDDAGFLEIETPVLSNPTPEGARD 193

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR+N G+FYALPQAPQQYKQLL  +G ++YFQIA CFRDED R+DR P EF Q+D+
Sbjct: 194 FLVPSRLNPGTFYALPQAPQQYKQLLQVAGLEKYFQIARCFRDEDLRADRQP-EFTQIDV 252

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I   +E +L+ +F+E + G  +   F R+ Y DA+ R+G+DKPDLR  + +
Sbjct: 253 EASFITDVEIQTLIEGMLKRIFKE-ARGVDIPTPFPRMTYADAMNRFGSDKPDLRFGLEL 311

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQ-GQPGL 356
            ++ + F  S F+VF  +   + G  + A+ AKG     ++    +  EW +++ G  GL
Sbjct: 312 VDLADIFKESGFKVFRSV--ADSGGVIKALNAKGAAALLSKEQLKKWEEWVKTEFGAKGL 369

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAAD 415
           AYI W   E G      P+ K  +    +A+  R+    GD  FF A   L+        
Sbjct: 370 AYIKW--SEGGEWE--SPIVKFFSDAEKKALAERMGFAAGDVLFFGADMKLEAVAEVLGR 425

Query: 416 ARNHIAQELGIINCNCFE--FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGN 472
            R   A  LG++     E  F W++DFP   ++ E+      H+PFT P+   M +L+  
Sbjct: 426 VRLRCADILGLLAAKKDELNFLWVVDFPLLAFSPEDNHWVAVHHPFTRPKAEDMPALEAG 485

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +   ++A  YD+V NG E+  G IR H  ++  + F  +G+  E  + +F  L RAF  G
Sbjct: 486 EYAKVRAVAYDVVLNGVELGGGSIRIHEKDLQTKMFEVLGVGPEEQQLKFAHLLRAFSFG 545

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
            PPHGGIA G+DR+VML +GA+++REV  FP +   CDL+  SP  V  +QLRE+
Sbjct: 546 APPHGGIALGLDRLVMLAVGAESIREVIAFPKNNRGCDLMTHSPVEVDFKQLREV 600


>gi|34499195|ref|NP_903410.1| aspartyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|46577181|sp|Q7NRP0|SYD_CHRVO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|34105046|gb|AAQ61402.1| aspartyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 597

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/596 (40%), Positives = 349/596 (58%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V + GW HR R HGG+IF+D+RD  G+ QVV +PD+   F++A 
Sbjct: 2   RTDYCGLIDKKYLGQTVTVKGWAHRRRDHGGVIFIDLRDREGLVQVVIDPDTPEAFKLAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R E+VL I G+V  R A T N+ +I+G+IE+ A++IEIL+ A   P  +  E    E+
Sbjct: 62  SSRGEYVLSITGIVRERPAGTANSKMISGEIEILAKEIEILNAAATPPFQIDDE-NLSEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + KN+  R ++   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPAMQKNLRLRYKVAMGVRNHLDKQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + +F++   G T+   F R+ Y DA+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMTKEIFQDVL-GVTLPT-FPRMTYGDAMFYYGSDKPDMRVALKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DVMKSEEFKVFRGAADMANGRVVALRVPNGASFSRKEIDDYTQFVAIYGAKGLAYIKVND 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
             +L+E G      P+ K L+    + I  R   Q+GD  FF A D  K  + A  A R 
Sbjct: 358 VTKLNEEGL---QSPIVKFLSANGLKEIIARTGAQNGDIIFFGA-DKAKVVNEAIGALRI 413

Query: 419 HIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            I  E G+ N      +   W++DFP +E +EEE +    H+PFT P+ G E L   D  
Sbjct: 414 KIGHEHGLENGYFVKEWRPLWVVDFPMFEHDEEEDRWTACHHPFTSPKPGHEDLMATDPG 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              A  YD+V NG+EI  G IR H +++  + F  + IS E  +N+FG L    + G PP
Sbjct: 474 KCLARAYDMVLNGWEIGGGSIRIHRADIQEKVFGALKISPEEQQNKFGFLLDNLKFGAPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+
Sbjct: 534 HGGLAFGLDRLVTLMCGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELNLRL 589


>gi|239624495|ref|ZP_04667526.1| aspartyl-tRNA synthetase [Clostridiales bacterium 1_7_47_FAA]
 gi|239520881|gb|EEQ60747.1| aspartyl-tRNA synthetase [Clostridiales bacterium 1_7_47FAA]
          Length = 602

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/593 (39%), Positives = 355/593 (59%), Gaps = 15/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FE 60
           RTH C ++  +D+G  V + GW+ + R  GGIIF+D+RD  GI Q++   +S C    F 
Sbjct: 10  RTHRCTEVTTADIGQEVTVMGWIQKSRNKGGIIFVDLRDRSGILQIIFE-ESDCGAENFA 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ + G V +RS   +N N+ TG IE+ A  + +L+ +E  P P+    + 
Sbjct: 69  KAEKLRSEFVVAVTGRVEARSG-AVNENLATGAIEVRAHSMRVLAESETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR  L +N++ R+R+    R  +  E F+E  TP L  S+PEGARD+
Sbjct: 128 KEELRLKYRFLDLRRPDLQRNLITRSRVATLTRAFLAEEGFLEIETPTLIKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQ+A C+RDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQLARCYRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+L+  E +L+ +F+E  N + V     R+ + +A+ RYG+DKPDLR  + + 
Sbjct: 247 LSFVDVDDVLDVNERLLQKLFKEICNFD-VQLPIQRMTWREAMDRYGSDKPDLRFGMELK 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           NV++     EF VF   L    G  V  I A+G G   R   D + E+A+  G  GLAY+
Sbjct: 306 NVSQVVKDCEFVVFKGAL--ENGGSVRGINAEGQGHMPRKKIDALVEYAKGFGARGLAYV 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              + E G+       AK +     +A+   +D + GD   F A           + R  
Sbjct: 364 --AIAEDGSFK--SSFAKFMKDEEMKALIAAMDGKPGDLLLFAADRDKVVFDVLGNLRLE 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A++LG++  + F+F W+ +FP  E++EEE +    H+PFTMP          D   ++A
Sbjct: 420 LARQLGLLKKDDFKFLWVTEFPLLEYSEEEDRYVAMHHPFTMPMDEDIQYIDTDPGRVRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G +R H +++  + F  +G + E    +FG L  AF+ G+PPH G+
Sbjct: 480 KAYDIVLNGVEMGGGSVRIHQADIQSKMFEVLGFTPERANEQFGFLLSAFKYGVPPHAGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VML++GA ++R+V  FP  ++   L+  +P  V  +QL+ELG+ I 
Sbjct: 540 AYGLDRVVMLMVGADSIRDVIAFPKVKDASCLMTEAPGEVDEKQLQELGIEIA 592


>gi|88811080|ref|ZP_01126336.1| aspartyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88791619|gb|EAR22730.1| aspartyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 595

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 238/600 (39%), Positives = 342/600 (57%), Gaps = 8/600 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG++  + +G  V + GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F+ A 
Sbjct: 2   RTHYCGEVAEALLGEEVEVCGWVHRRRDHGGVIFIDLRDREGLLQVVFDPDVAGAFQAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL + G V  R   T N ++ TG +E+  Q++EIL+ A+  P  +  E +  E 
Sbjct: 62  RVRSEYVLRVRGKVRRRPEGTENLSLNTGLVEVFGQELEILNRAKTPPFQL-DEVDVGED 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR++DLRR  + + +  R R+   +R  +    F++  TP+LT ++PEGARDFLVP
Sbjct: 121 VRLKYRYIDLRRQAMQQQLRTRARVAGVLRRYLDRHGFVDVETPMLTRATPEGARDFLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR++QGSFYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF QLD+E SF
Sbjct: 181 SRLHQGSFYALPQSPQLFKQLLMISGLDRYYQIVRCFRDEDLRADRQP-EFTQLDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++  I+  ME ++R +F E      +   F R+ Y +A++R+G D+PDLR P+ +  V 
Sbjct: 240 LDESAIMALMEGMIRELFREVL-AVELPEPFPRMSYAEALQRFGIDRPDLRIPLELVEVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF+   + +P   V A+   GGG  +R   D    +    G  GLAYI   
Sbjct: 299 DLMAAVEFKVFAGPAN-DPKGRVAALRVPGGGELSRKAIDDYTRFVTRYGAKGLAYIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K L       I  R   + GD  FF A          A  R  +  
Sbjct: 358 DPARGREGLQSPILKFLPGSAVTGILERTAAEAGDLIFFGADRAKVVNESLAALRIKLGH 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG++    +   W++DFP +E++E +++    H+PFT P+        +D   + +  Y
Sbjct: 418 ELGLVEPG-WRPLWVIDFPMFEYDETDRRFYALHHPFTAPRMSDPEQLRDDPQRLLSRAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+  G +R H  E+    F  +GI  E    +FG L  A + G PPHGGIA G
Sbjct: 477 DLVLNGTELGGGSVRIHRPEMQYAVFDLLGIGAEEAREKFGFLLEALEYGAPPHGGIAFG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           +DR++MLL G  ++REV  FP +Q    LL  +P+ V    LRELG+R    P   +K+ 
Sbjct: 537 LDRMIMLLTGVGSIREVMAFPKTQTASCLLTQAPAPVEEAALRELGIR-ARKPVDAVKVD 595


>gi|315641700|ref|ZP_07896745.1| aspartate--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315482549|gb|EFU73083.1| aspartate--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 591

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/593 (39%), Positives = 348/593 (58%), Gaps = 16/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+  CG +    +   V L GWV + R  GG+IF+D+RD  GI QVV NP ++   + IA
Sbjct: 4   RSVYCGLVNEEWLDKRVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPATSEEAWAIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ I G V+ RS E +N  + TG  E+ A +I IL+ A+  P P+  E +  +
Sbjct: 64  DKCRSEYVIEISGTVIQRSPEAVNPKMQTGAYEVMADQITILNRAKTPPFPIEDENQVGD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KN++ RT+   ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 DIRMKYRYLDLRRPQMTKNLLLRTKTTQAIRRYLDDNDFLDIETPYLAKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLMASG DRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHPGHFYALPQSPQIFKQLLMASGMDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E +++ V ++   G  V+  F R+ + +A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIQKVMKDV-KGIDVTLPFPRMTWQEAMNRYGSDKPDTRFEMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E     +F+VF   +++  G  V A+ AKG     +R   D++ ++    G  GLA++ 
Sbjct: 302 SETVKDIDFKVFQ--MAIENGGVVKALNAKGAADKYSRKDMDQLGQYVSQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
            +++E G     GP+AK      TEAI    + + GD   F   D  +  S    A R  
Sbjct: 359 -KVEEDGL---KGPIAKFFKEA-TEAIIAATNAEVGDLLMF-GADSFEVVSATLGAVRTR 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +ELG+I+   F + W++D+P +E++EE  +   AH+PFTMP+     L   D   + A
Sbjct: 413 LGKELGLIDATKFNYLWVVDWPQFEYDEEAGRYVSAHHPFTMPKASDVELLATDPARVHA 472

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H  EV  Q F  +G S+  +  +FG L  A   G PPHGGI
Sbjct: 473 EAYDIVLNGYELGGGSLRIHTREVQEQMFETLGFSRREMTEQFGFLLEALDYGFPPHGGI 532

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR  MLL G  N+REV  FP +    D +  +PSTVS  QL EL + + 
Sbjct: 533 ALGLDRFAMLLAGEDNIREVIAFPKNGRAIDPMSQAPSTVSPLQLFELNIDVT 585


>gi|297569982|ref|YP_003691326.1| aspartyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925897|gb|ADH86707.1| aspartyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 593

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/589 (38%), Positives = 353/589 (59%), Gaps = 11/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           R+H C  L    +G  V L GWV R R HGG+IF+D+RD  GITQVV NP++       A
Sbjct: 9   RSHHCNILNAEHIGREVTLMGWVLRRRDHGGVIFIDLRDRRGITQVVFNPETNPEVHAKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++RSEWVL + G V +R     N  + TG+IE+   +++IL+ ++  P P+  E E  +
Sbjct: 69  HALRSEWVLAVKGTVRARPEGMANPKLKTGEIEVMVSELKILNQSQTPPFPLDEEIEISD 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YR+LDLRR  +  N++ R +   ++R  +  E+F+E  TP+LT S+PEGARD+LV
Sbjct: 129 NLRLQYRYLDLRRPAMAHNLLLRHQACQAIRQYLNGEDFLEIETPVLTRSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G F+ALPQ+PQ +KQLLM +G +RY+QI  CFRDED R+DR P EF Q+DME+S
Sbjct: 189 PSRVNPGRFFALPQSPQLFKQLLMVAGMERYYQIVRCFRDEDLRADRQP-EFTQVDMELS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV +++++   E +++ +F   + G  ++  F R+ Y +A+ R+GTD+PD R  + +  +
Sbjct: 248 FVGEEEVMAVAEGMMKALFAA-TLGRELAPPFPRMTYAEAMARFGTDRPDTRFGLELVEL 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE   +   +VF +I   + G  + +I AKG    +R   D +  +A   G  GLA++  
Sbjct: 307 TEVVKNCGLKVFREI--ADKGGMIKSINAKGCADFSRKDLDDLTAYAGQFGAKGLAWV-- 362

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++ E G      P+AK       +A+   +  +  D  FF+A  P       A+ R  +A
Sbjct: 363 KIKEGGE--WQSPIAKFFTEEERQAMMDTMQAEKDDLLFFVADQPAIVHGALAELRLELA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L +++   F F W+ DFP  E++ E K+    H+PFT P+    +L  ++   +++  
Sbjct: 421 RRLELVSKEDFSFVWVTDFPLLEYDHEAKRHVAVHHPFTAPREEDLALLDSEPGKVRSRA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  E+  + F+ +GIS+E + ++F  L RA + G PPHGG+A 
Sbjct: 481 YDLVLNGTEIGGGSIRIHHKEMQERVFAALGISQEEINDKFDFLVRALELGAPPHGGLAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR++M++ G  ++R+V  FP +Q     L  +P+ V+  QL EL L+
Sbjct: 541 GLDRLMMIIAGRDSIRDVIAFPKTQKATCPLTNAPAPVARRQLTELSLK 589


>gi|71906274|ref|YP_283861.1| aspartyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|97196648|sp|Q47IE0|SYD_DECAR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71845895|gb|AAZ45391.1| aspartyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 599

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/593 (40%), Positives = 356/593 (60%), Gaps = 14/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  +  G  V L GW HR R HGG+IF+D+RD  G+ QVV +PD A  F+IA+
Sbjct: 2   RTHYCGQLNAALDGQIVTLCGWAHRRRDHGGVIFIDLRDREGLAQVVCDPDRADTFKIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+ L I G V  R A T NAN+ +G+IE+   +IE+L+ +   P  +  E    E+
Sbjct: 62  SVRNEFCLKITGKVRPRPAGTTNANLASGEIEILCHEIEVLNPSVTPPFQL-DEDNLSEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R  +R +DLRR  +  N++ R +   + R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLLHRVIDLRRPQMQNNLMLRYKTSRAFRRFLDDNGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +G+DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGQFFALPQSPQLFKQLLMVAGYDRYYQIVKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I+   E ++R VF+E  + +    +F R+ Y +A+ R+G+DKPDLR  + +  VT
Sbjct: 240 MSEAEIMALTEKLIRTVFKEAIDVDL--PDFPRMTYAEAMHRFGSDKPDLRVTLELTEVT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           + F    F+VF+ + + + G  + A+   GG    R   D   ++    G  GLAYI  +
Sbjct: 298 DAFKDVAFKVFAGVAN-SEGGRIAAMRIPGGATLTRGEIDAYTQFVGIYGAKGLAYI--K 354

Query: 363 LDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
           ++++  +   G   P+ K+L+  + +A+  R   Q GD  FF A D  K  + A  A R 
Sbjct: 355 VNDASQINETGLQSPIVKNLSEASLKAVIERTGAQSGDLIFFGA-DKAKIVNDALGALRI 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I  E G +    +   W++DFP +E+++E K+    H+PFT P+     L  +D     
Sbjct: 414 KIGHEKGFVTGAKWAPLWVIDFPMFEYDDESKRWTACHHPFTSPKDEHLDLLVSDPGKCL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDL  NG+E+  G +R H S+V  + FS + I  E  + +FG L  A + G PPHGG
Sbjct: 474 AKAYDLALNGWELGGGSVRIHRSDVQEKVFSALNIGPEEQQAKFGFLLDALKYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+
Sbjct: 534 LAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTDAPSGVDEKQLRELHIRL 586


>gi|213966108|ref|ZP_03394295.1| aspartyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213951206|gb|EEB62601.1| aspartyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 609

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 245/606 (40%), Positives = 337/606 (55%), Gaps = 29/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  GDL     GS V L+GWV R R HGG+IF+D+RD  G  QVV   +S   E A  
Sbjct: 3   RTHLAGDLRADLAGSTVTLTGWVGRRRDHGGVIFIDMRDRSGYAQVVFR-NSEVAERAHH 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP---VFGEREYP 121
           +RSE+ + + G+V  R   + N N+ +G+IE++  ++ IL+ +  LP     V       
Sbjct: 62  LRSEYCIQVTGVVEKRPEGSENPNLASGEIEVNVTELTILNESAALPFQLEDVGTSGTVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR+   K +  R  +  + R  + + +F E  TP LT S+PEGARDF+
Sbjct: 122 EEARLKYRYLDLRREGPAKIMRLRAAVNRAARKVLDSHDFTEIETPTLTRSTPEGARDFV 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLKPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF EQDD++   E +L  +F E   G TV     R+ + +A+ +YG+DKPDLR  I +  
Sbjct: 241 SFAEQDDVIALAEEILVAIFAE--AGVTVQTPIPRMTFKEAMEKYGSDKPDLRFDIPLVE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360
            TE F  + FRVF           V A+   GG    R   D   +WAR +G  GLAYI 
Sbjct: 299 CTEFFKDTTFRVFQNDY-------VGAVVMDGGASQPRRQLDAWQDWARQRGAKGLAYIL 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +   GPVAK++     E I   +  + GD  FF AGD     +    AR  I
Sbjct: 352 --VGEDGTLG--GPVAKNITDAEREGIAAHVGAKPGDCIFFAAGDAKSSRALLGAARGEI 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLK 470
           A++LG+I    + F W++D P +E   +            +    H+ FT P+       
Sbjct: 408 AKKLGLIKEGDWAFTWVVDAPLFEPAADATASGDVALGHSQWTAVHHAFTSPKPEHMDTF 467

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  +  A+ YD+VCNG EI  G IR H  +V  + F  +GI +E  + +FG L  AFQ
Sbjct: 468 DKDPGNALAYAYDIVCNGNEIGGGSIRIHRPDVQKRVFDVMGIGEEEAQEQFGFLLDAFQ 527

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DRIV LL G  ++REV  FP S    D L  +P+ ++ +Q +E G+ 
Sbjct: 528 YGAPPHGGIAFGWDRIVSLLAGVDSIREVIAFPKSGGGVDPLTDAPTPITAQQRKETGID 587

Query: 591 IVENPK 596
               PK
Sbjct: 588 FKPKPK 593


>gi|239616618|ref|YP_002939940.1| aspartyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239505449|gb|ACR78936.1| aspartyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 591

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/596 (37%), Positives = 351/596 (58%), Gaps = 16/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEI 61
           + RTH+CG+L     G  V L+GWV R+R  GGI F+ +RD YG TQVV +P +   ++ 
Sbjct: 2   KKRTHTCGELRSEHAGKTVVLNGWVDRIRDLGGIKFILLRDRYGFTQVVFDPSNEDVYKT 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + + G+V  R  + +N  + TG+IE+ A ++EILS ++  P+ V  + +  
Sbjct: 62  ALQLGIEYTISVTGIVRERPKDAVNPKMPTGKIEVLATEVEILSESDTPPIYVNIDDDSS 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E ++ KYR+L+LR+  + +NI+ R +++ ++R  +   NF+E  TP+LT S+PEGARDFL
Sbjct: 122 EELKLKYRYLNLRKPKMQRNIIFRHKVVQAVRNYLNKNNFLEIETPVLTKSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM +GFDRY+QIA C+RDED R+DR P EF Q+D+EM
Sbjct: 182 VPSRLRPGKFYALPQSPQLFKQLLMVAGFDRYYQIAKCYRDEDFRADRQP-EFTQIDLEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF + +D+   +E +L   F+E  N   ++  F R+ Y++A+  YG+D+PD R  + +H+
Sbjct: 241 SFADSEDVFAIVEGMLSHTFKETLNVG-LTTPFPRLTYEEAMEMYGSDRPDRRYGMELHD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V+E FV + FRV S+ L    G  V    AKG     +R   D    + +  G  GL +I
Sbjct: 300 VSEAFVGTGFRVISEALGR--GEIVKGFLAKGLSSKFSRKRLDEYTAFVKENGLGGLIWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
               +   ++    P          + +  R + + GD  F   G            R  
Sbjct: 358 KVEDELRSSILKHCP-------DEIKKVVERFNAKIGDIIFLAIGKRETVSKALGKLREK 410

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIK 478
           +  E        F+  W+ DFP + +NEEE +I+  H+PFTMP  G ++     + L ++
Sbjct: 411 LISEEK-PEVTGFDILWVTDFPMFSYNEEEGRIEAEHHPFTMPNLGDLDKFGKTEPLKVR 469

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG+E+ASG +R H  ++  + F  +G++ E  + +FG L  AF+ G PPH G
Sbjct: 470 SHAYDLVINGYELASGSVRIHRRDIQNRIFEMIGLTHEEAQEKFGFLLEAFKYGPPPHAG 529

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA G+DR+V +++G  ++R+V  FP + +  D + G+PS VS  QL EL ++I++ 
Sbjct: 530 IAFGLDRLVAIMVGTSSIRDVIAFPKAASGNDPMTGAPSEVSERQLEELRIKIIDE 585


>gi|237802971|ref|YP_002888165.1| aspartyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|231274205|emb|CAX10999.1| aspartyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 582

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/595 (40%), Positives = 349/595 (58%), Gaps = 20/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSAC 58
           +YRTH C +L +  VG  VRLSGWVHR R HGG++F+D+RD +GITQ+V     NP+   
Sbjct: 2   KYRTHKCNELSLDHVGEHVRLSGWVHRYRNHGGVVFIDLRDCFGITQIVCRQEENPE--L 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            ++   VRSEWVLC++GLV +R     N N++TG IE+    +E+LS A+ LP  +  E 
Sbjct: 60  HQLMDQVRSEWVLCVEGLVCARLEGMENPNLVTGSIEVEVSSLEVLSRAQNLPFSISDEH 119

Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R  YR+LD+RR  +   ++ R +++ + R  +  + F E  TPIL  S+PEGA
Sbjct: 120 INVNEELRLTYRYLDMRRGDILDRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGA 179

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSR+  G+FYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+
Sbjct: 180 RDYLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFTQI 238

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF E +D+   +E ++  +F     G  +   FLR+ Y +A   YGTDKPDLR  +
Sbjct: 239 DMEMSFGEPEDLFPVVEELVARLFA--VKGIELKAPFLRMTYQEAKDSYGTDKPDLRFGL 296

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + N  E+     F +F   L+     + + +P  G   +R   D   ++ +  G  GL 
Sbjct: 297 RLKNCCEYARKFTFSIFLDQLAYGGTVKGFCVPG-GADMSRKQLDIYTDFVKRYGAMGLV 355

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-A 416
              W   + G V+    VAK  +    + +    + +D D    IA  P    + A D  
Sbjct: 356 ---WIKKQDGGVS--SNVAKFASEDVFQEMFEAFEAKDQDILLLIAA-PEAVANQALDHL 409

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  IA+E  + +   + F WI DFP +   +EE ++   H+PFT P     SL  +D  +
Sbjct: 410 RRLIARERQLYDSTQYNFVWITDFPLF--AKEEGELCPEHHPFTAPLDEDISLLDSDPFA 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +++  YDLV NG+EIASG  R H  ++  + F+ + +S+E V+ +FG    A   G PPH
Sbjct: 468 VRSSSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFGFFIDALSFGTPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GIA G+DRI+M+L GA+ +REV  FP +Q   DL+M +PS +   QL+ELGL++
Sbjct: 528 LGIALGLDRIMMVLTGAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582


>gi|187778365|ref|ZP_02994838.1| hypothetical protein CLOSPO_01957 [Clostridium sporogenes ATCC
           15579]
 gi|187771990|gb|EDU35792.1| hypothetical protein CLOSPO_01957 [Clostridium sporogenes ATCC
           15579]
          Length = 593

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 244/596 (40%), Positives = 361/596 (60%), Gaps = 20/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+   +++G  V + GWV R R  GG+IF+D+RD  GI Q+V   +     FE +
Sbjct: 10  RTIMCGEPRENNIGQKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEKS 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +V+SE+ + + G ++ R  ++ N ++ TG +EL  + I+ILS +E  P+ +    +  E
Sbjct: 70  DNVKSEYCIAVTGEIVKR--QSPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDASE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR  + K  + R +    +R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 128 NIRLKYRYLDLRRPDMQKIFMVRHKTCKVVRNFLDENGFLEMETPILTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE+DD++   E +L  VF+E + G  +     R+ Y  A+ RYG+DKPDLR  + ++++
Sbjct: 247 FVEEDDVIELNERLLAKVFKEVA-GIDIKLPIERMPYKIAMERYGSDKPDLRFGMEINDL 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           TE   +SEF+VF    ++  G  V AI A G   N  R   D++ ++ ++    GLA+I 
Sbjct: 306 TEVVKNSEFKVFKG--AIENGGSVRAIKA-GNCANMGRKQIDKLQDFVKTYKAKGLAWIA 362

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
           ++ DE  +     P+AK L     +AI  ++D + GD    +A  + + F S  A  R H
Sbjct: 363 YKEDEIKS-----PIAKFLTEEEMKAILEKMDAKVGDLILIVADKNNVVFESLGA-LRLH 416

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL IIN + F F WI +FP   +NEEE +    H+PFT        L   D   ++A
Sbjct: 417 LAKELDIINKDEFRFVWITEFPLLSYNEEEGRYQAEHHPFTALMDEDIELLDTDPGKVRA 476

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++  + F+ +G +KE    RFG L  AF+ G PPHGG+
Sbjct: 477 KAYDIVLNGEELGGGSIRIHDSKLQEKMFNVLGFTKEKAWERFGFLLEAFKFGPPPHGGL 536

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR++M L G +N+++V  FP +QN FC  L  +P+ V   QL ELG++ +E 
Sbjct: 537 AYGLDRMIMFLAGTENIKDVITFPKNQNAFCP-LTEAPNVVDENQLEELGIKKIEK 591


>gi|312794170|ref|YP_004027093.1| aspartyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181310|gb|ADQ41480.1| aspartyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 594

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 345/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG++ + DVG  V L+GWV   R  GGIIF+D+RD  GI QVV +        + A
Sbjct: 9   RTKYCGEVSLEDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+RSE+ + + G+V  R  ET+N  I TG++E+ A ++ I + +E  P P+       E
Sbjct: 69  DSLRSEYCIGVRGIVEKRPPETVNPKIKTGEVEVRATELRIFNKSETPPFPIEEGINVNE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + +N++ R ++   +R  +    FIE  TP+LT S+PEGARD+LV
Sbjct: 129 AVRLKYRYLDLRRPNMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQ +KQLLM +GFDRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 189 PSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ DD++   E +L+ +F E   G  +     R+ Y +A+ R+G+DKPD R  + + ++
Sbjct: 248 FVDVDDVIEINEKLLQTIFGEML-GIDLKLPLPRLTYKEAMERFGSDKPDTRFGMELVDI 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           T+   + EF+VFS   + N G  V AI AKG     +R   D + E+A++    GLA+I 
Sbjct: 307 TDIVKNCEFKVFSD--AANKGGSVRAINAKGCAATFSRREIDALVEFAKNFRAKGLAWIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D         P+ K L       I  RL  + GD   F A           + R  I
Sbjct: 365 VESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKDEIVFDVLGNLRLEI 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +++ + F   W+++FP +E++EEE +    H+PFT P          D   +++ 
Sbjct: 420 ARKLNLLDKSKFNLLWVVEFPLFEYSEEEGRFVAKHHPFTSPMDEDIEFLETDPARVRSK 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H  E+  + F  +G ++E  ++RFG L  AF+ G PPHGGIA
Sbjct: 480 AYDIVLNGTEIGGGSIRIHSPEIQKRMFKALGFTEERAQDRFGFLLEAFKYGTPPHGGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G DR+ MLLLG  ++R+   FP  ++    L  +PS V  +QLREL +++
Sbjct: 540 YGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590


>gi|315638545|ref|ZP_07893721.1| aspartate--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481389|gb|EFU72017.1| aspartate--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 583

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 235/596 (39%), Positives = 347/596 (58%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H   DL  +++G  VRL GWV+  R HGG+IF+D+RD  G+ Q+V +P+ +    EIA
Sbjct: 2   RSHYNTDLNKANIGEEVRLCGWVNSYRDHGGVIFIDLRDRSGLIQLVCDPNDSQKAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+VL   G V  R    INA + TG+IE+   ++ I+     +P    G+    E
Sbjct: 62  SSVRNEFVLIAHGKVRPRGEGLINAKLKTGEIEVVVSEL-IVENESMVPPFAIGDESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRNPRLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM + FDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCANFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++   E  L+ +F   + G  +   F ++ Y +A+  YG+DKPDLR  + + +V
Sbjct: 240 FCEQKDVMAVAETFLKDIFA--ACGKQIRTPFRQMSYKEAMENYGSDKPDLRFDLKLIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        + A+    G    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFAKSNNEIFTNIAKDPYKNRIKALKVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  + + +  R +++ GD  FF AG       +    R  +
Sbjct: 358 AKED-----GLKGPLCKFFSEEDLKELEKRCELEVGDVVFFGAGVKKVVLDYMGRFRLFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +++ N  EF W++DFP +E N ++      H+PFTMP+    ++   +L  I + 
Sbjct: 413 AEELKLLDPNALEFLWVVDFPMFEKN-DDGSYSAMHHPFTMPK----NIDEENLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +E+  + F  + I++E    +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNEIQQKVFKLLNINEEEQREKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+  A ++REV  FP +Q    L+  +PS  S E +RELGL++ E+ K
Sbjct: 528 IGLDRLIMLVSKASSIREVIAFPKTQRAQCLMTEAPSEASKEAMRELGLKLRESVK 583


>gi|210134820|ref|YP_002301259.1| aspartyl-tRNA synthetase [Helicobacter pylori P12]
 gi|238064681|sp|B6JLK1|SYD_HELP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|210132788|gb|ACJ07779.1| aspartyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 577

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/589 (38%), Positives = 349/589 (59%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G V  R A   N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGRVRLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKSVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+    G+T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQEIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFIDSSNAIFSNIAKDPKNQRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKIGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+    +++  D+  ++A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECEDIEEVEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTNAPSPINEEQLRELHIRL 575


>gi|119476897|ref|ZP_01617178.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119449704|gb|EAW30941.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 590

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/596 (40%), Positives = 358/596 (60%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG +  + +   V L GWV R R HGG+IFLD+RD  GI QVV +PD+   F+ A 
Sbjct: 2   RTHYCGTITSAQIDEEVTLYGWVDRRRDHGGVIFLDMRDREGIVQVVFDPDTEEHFQRAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL I G V +RS  TIN N++TG+IE+  +K+EIL+ A   P  +    E  E 
Sbjct: 62  RVRSEYVLEIKGRVRARSDATINPNMLTGEIEILGKKLEILNSAATPPFQLDQHIEVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR++DLRR  + + +  R+R+ +S+R  M    F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKYRYIDLRRPEMLEKLKLRSRVTSSIRRFMDENGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHEGKFFALPQSPQLFKQLLMVSGMDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    I+   E +++G+F+E  + +    +F  + Y +A+ R+G+DKPDLR P+ + +V 
Sbjct: 241 MNDQQIMAITERMIQGLFKEVLDVDL--GDFPHMPYAEAMSRFGSDKPDLRIPLELVDVD 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF+   +   G  V A+   GG   +R   D   ++    G  GLA+I   
Sbjct: 299 DLMRQVDFKVFNGPANDAKG-RVAALKVTGGAQISRKQIDGYTKFVSIYGAKGLAWIKIN 357

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
            D +  + G+  P+ K +       +  RL + DGD  FF   D     + A  A R  +
Sbjct: 358 -DITAGIEGLQSPILKFMPEDIITQMMARLAVTDGDIVFF-GADKTSIVNEALGALRVKV 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++ G+I  + +   W++DFP +E N  E  +   H+PFT P    E+L+ N   ++ + 
Sbjct: 416 GEDQGLIKGD-WAPLWVVDFPMFEEN-SEGNLTSLHHPFTAPACSPEALEKNPEQAL-SI 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H +++    F  +GIS E  + +FG L  A + G PPHGG+A
Sbjct: 473 AYDMVLNGTELGGGSVRIHQADMQQAVFRVLGISDEEAQEKFGFLLDALKYGAPPHGGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VML+ GAK++R+V  FP +Q+   ++  +P     +QLREL +R+ E PK
Sbjct: 533 FGLDRLVMLMTGAKSIRDVIAFPKTQSAACVMTDAPGLADNKQLRELNIRLREKPK 588


>gi|257899579|ref|ZP_05679232.1| aspartyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837491|gb|EEV62565.1| aspartyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 589

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/592 (39%), Positives = 344/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+     +EIA
Sbjct: 4   RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G+V  R    +N  + TG+ E+ A +I IL+ A+  P  +  ++   +
Sbjct: 64  DKCRSEYVIEVTGVVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KNI  R     ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E   G  V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEV-RGIEVALPFPRMTYDEAMARYGSDKPDTRFEMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E     EF+VF   +++  G  V A+ AKG     +R   D++ ++    G  GLA++ 
Sbjct: 302 SETVKEVEFKVFQ--MALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK +    TEAI    D + GD   F A       +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFMGEA-TEAIIKATDAEPGDLLMFGADKSEIVAAALGAIRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP+     L   D   + A 
Sbjct: 414 GKELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKAEDIPLLAEDPAKVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  +    +G +KE +E +FG L  A   G PPHGGIA
Sbjct: 474 AYDIVLNGYELGGGSIRIHTRELQEKVLKTLGFTKEQMEEQFGFLLTALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR  MLL G  N+REV  FP +    D++  +PS VS  QL EL + + 
Sbjct: 534 LGLDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585


>gi|220929365|ref|YP_002506274.1| aspartyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|254781726|sp|B8I3F1|SYD_CLOCE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219999693|gb|ACL76294.1| aspartyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 593

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 230/591 (38%), Positives = 348/591 (58%), Gaps = 10/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63
           R+H C +L  S++G  V + GWV + R  G ++F+D+RD  GI Q+V  + D   F+ AK
Sbjct: 10  RSHKCTELSSSNIGEKVTVMGWVQKQRNLGSLVFIDLRDRTGIVQLVFTDKDGEMFDKAK 69

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+V+   G V +RSAE +N  + TG+IE+ A ++ ILS +E  P+ +    +  E 
Sbjct: 70  TIRSEYVIATVGTVAARSAEAVNKKMATGEIEIIASELRILSSSETPPMYIEENSDVNEQ 129

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYRFLDLRR  + +N++ R R+    R       F+E  TPIL  S+PEGARD+LVP
Sbjct: 130 TRLKYRFLDLRRPDMQRNLILRHRVAKVARDYYDQNGFLEIETPILIKSTPEGARDYLVP 189

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQLLM SG+DRYFQIA CFRDED R+DR P EF Q+D+EMSF
Sbjct: 190 SRVHPGKFFALPQSPQLYKQLLMVSGYDRYFQIAKCFRDEDLRADRQP-EFTQIDIEMSF 248

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V  DD+L   E  ++  F+E + G  V   F R+ Y +A+ R+G+DKPD+R  + + N++
Sbjct: 249 VNVDDVLEVNEGFVKKAFKE-ALGVDVETPFTRMPYAEAMERFGSDKPDIRFGMELVNMS 307

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   +  F+VF+  +++  G  V AI AKG    +R   D + +  ++    G+A+I   
Sbjct: 308 DLVANCGFKVFTDAVAM--GGSVRAINAKGCAKFSRKEIDALVDLVKTYKAKGMAWI--S 363

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + +   +      AK ++    +AI  R   + GD   F+A             R  IA+
Sbjct: 364 ISQENEIK--SSFAKFMSEDEMKAILNRAQAEAGDLICFVADKNNVVFDALGQLRLEIAR 421

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L I+N + F+F W+ +FP +E++EE+++    H+PFT P          D   ++A  Y
Sbjct: 422 KLDILNPDEFKFLWVTEFPLFEYDEEDQRWAAKHHPFTSPMDEDLQYLDTDPGRVRAKAY 481

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H+ E+  + F  +G ++E    +FG L  AF+ G PPHGG+A G
Sbjct: 482 DMVLNGVELGGGSIRIHIQELQAKMFKMLGFTEEDANRKFGFLLEAFKYGTPPHGGMAFG 541

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DR+VML+    ++R+V  FP  QN    +  +P  V   Q+ EL + I +
Sbjct: 542 LDRLVMLMAKRNSIRDVIAFPKVQNASCPMSNAPDVVDETQIEELHISIAK 592


>gi|254375257|ref|ZP_04990737.1| aspartyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|151572975|gb|EDN38629.1| aspartyl-tRNA synthetase [Francisella novicida GA99-3548]
          Length = 592

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 4   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 64  LRSEFVIKAEGVVNLRPEGQENKNIASGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 123

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 124 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 183

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 184 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 242

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E + G   +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 243 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 301

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + +F+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 302 DMQNEDFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 361 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 420

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E  +++ ++   H+PFT P+   +E L   +   + +  
Sbjct: 421 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS E    +FG +  A   G P HGGIA 
Sbjct: 478 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ +
Sbjct: 538 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 587


>gi|57339604|gb|AAW49789.1| hypothetical protein FTT0007 [synthetic construct]
          Length = 627

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 30  RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 89

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 90  LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 149

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 150 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 209

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 210 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 268

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E + G   +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 269 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 327

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 328 DMQNEEFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 386

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 387 SLSQGKEGLQSPIVKNISEETLFKVIDKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 446

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E  +++ ++   H+PFT P+   +E L   +   + +  
Sbjct: 447 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 503

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS +    +FG +  A   G P HGGIA 
Sbjct: 504 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 563

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIDR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ +
Sbjct: 564 GIDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 613


>gi|312128270|ref|YP_003993144.1| aspartyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778289|gb|ADQ07775.1| aspartyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 594

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  C ++ + DVG  V L+GWV   R  GGIIF+D+RD  GI QVV +        + A
Sbjct: 9   RTKYCAEVSLEDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+RSE+ + + G+V  R  ET+N  I TG++E+ A ++ I + +E  P P+       E
Sbjct: 69  DSLRSEYCIGVRGIVEKRPPETVNPKIKTGEVEVRATELRIFNKSETPPFPIEEGINVNE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + +N++ R ++   +R  +    FIE  TP+LT S+PEGARD+LV
Sbjct: 129 AVRLKYRYLDLRRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQ +KQLLM +GFDRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 189 PSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ DD++   E +L+ +F E   G  +     R+ Y +A+ R+G+DKPD R  + + ++
Sbjct: 248 FVDVDDVIEINEKLLKTIFGEML-GIDLKLPLPRLTYKEAMERFGSDKPDTRFGMELVDI 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           T+   + EF+VFS   + N G  V AI AKG     +R   D + E+A++    GLA+I 
Sbjct: 307 TDIVKNCEFKVFSD--AANKGGSVRAINAKGCAATFSRREIDALVEFAKNFKAKGLAWIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D         P+ K L       I  RL  + GD   F A           + R  I
Sbjct: 365 VESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKDEIVFDVLGNLRLEI 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +++ + F   W+++FP +E++EEE +    H+PFT P          D   +++ 
Sbjct: 420 ARKLNLLDKSKFNLLWVVEFPLFEYSEEEGRFVAKHHPFTSPMDEDLEYLETDPAKVRSK 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H  E+  + F  +G ++E  ++RFG L  AF+ G PPHGGIA
Sbjct: 480 AYDIVLNGTEIGGGSIRIHSPEIQKRMFKALGFTEEKAQDRFGFLLEAFKYGTPPHGGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G DR+ MLLLG  ++R+   FP  ++    L  +PS V  +QLREL +++
Sbjct: 540 YGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590


>gi|139474587|ref|YP_001129303.1| aspartyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|166225434|sp|A2RGY0|SYD_STRPG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|134272834|emb|CAM31112.1| aspartyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 582

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/593 (39%), Positives = 350/593 (59%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++   
Sbjct: 3   RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++G V +R  +  N  + TG +EL    + IL+ A+  P  +  + E  
Sbjct: 63  AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDAEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +T      +F+VFS+  +V       AI  KG     +R   D++ E+A+  G  GLA  
Sbjct: 299 LTVTVKGIDFKVFSEAPAVK------AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA-- 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W     G  +  GPVAK L  + TE +  +L + + D   F+A D L+  +    A RN
Sbjct: 351 -WVKVTDGQFS--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++
Sbjct: 406 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG
Sbjct: 466 AIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR VMLL    N+REV  FP +    D +  +PS VS  QL EL L+I
Sbjct: 526 LAIGLDRFVMLLAEKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 578


>gi|56707192|ref|YP_169088.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110669662|ref|YP_666219.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|254371406|ref|ZP_04987407.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875668|ref|ZP_05248378.1| aspS, aspartyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56603684|emb|CAG44640.1| Aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110319995|emb|CAL08023.1| Aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569645|gb|EDN35299.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254841667|gb|EET20103.1| aspS, aspartyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 592

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 4   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 64  LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 123

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 124 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 183

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 184 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 242

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E + G   +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 243 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 301

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 302 DMQNEEFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 361 SLSQGKEGLQSPIVKNISEETLFKVIDKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 420

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E  +++ ++   H+PFT P+   +E L   +   + +  
Sbjct: 421 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS +    +FG +  A   G P HGGIA 
Sbjct: 478 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIDR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ +
Sbjct: 538 GIDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 587


>gi|328676200|gb|AEB27070.1| Aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase
           [Francisella cf. novicida Fx1]
          Length = 590

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 2   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 62  LRSEFVIKAEGVVNLRPEGQENKNIASGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E + G   +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 241 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + +F+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 300 DMQNEDFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 359 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E  +++ ++   H+PFT P+   +E L   +   + +  
Sbjct: 419 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS E    +FG +  A   G P HGGIA 
Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ +
Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 585


>gi|257877238|ref|ZP_05656891.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257811404|gb|EEV40224.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 591

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/593 (40%), Positives = 349/593 (58%), Gaps = 16/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG +  + +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+ +   +EIA
Sbjct: 4   RTVYCGLVNETHLNQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEVSKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+VL + G V++R+ E IN  ++TG  E+   +I IL+ A+     +  ++   +
Sbjct: 64  DKCRSEYVLEVTGQVINRAPEAINPKMVTGAYEVMISEITILNTAKTPAFLIEDDQTVGD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  +  NIV R +   ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRMKYRYLDLRRPKMTNNIVMRAKTTQAIRNFLDTNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRIYPGHFYALPQSPQIFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E +L  V  E   G  V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEELLAKVMREV-KGIEVTLPFPRMTYDEAMGRYGSDKPDTRFDMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E     +F+VF   +++  G  V  + AKG     +R   D +  +A   G  GLA++ 
Sbjct: 302 SEVVKDVDFKVFQ--MALEKGGVVKVLNAKGAADKYSRKDMDNLGHYAGQFGAKGLAWV- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
            +++E G     GP+AK L    T+AI    + + GD   F   D     S    A RN 
Sbjct: 359 -KVEEDGL---KGPIAKFLTEA-TDAIIAAANAEVGDILMF-GADSFAIVSATLGAIRNK 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +ELG+I+ + F F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A
Sbjct: 413 LGKELGLIDESKFNFLWVTDWPQFEYDEEAGRYVSAHHPFTLPKESDLPLLTTDPSKVYA 472

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H  EV  Q F  +G S+  ++N+FG L  A   G PPHGGI
Sbjct: 473 QAYDIVLNGYELGGGSLRIHTREVQEQMFEALGFSRREMQNQFGFLLDALDYGFPPHGGI 532

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VMLL G +N+REV  FP +    D +  +PSTVS  QL +L + + 
Sbjct: 533 ALGLDRLVMLLAGEENIREVIAFPKNGKAADPMSQAPSTVSPMQLFDLNIDVT 585


>gi|164687516|ref|ZP_02211544.1| hypothetical protein CLOBAR_01157 [Clostridium bartlettii DSM
           16795]
 gi|164603290|gb|EDQ96755.1| hypothetical protein CLOBAR_01157 [Clostridium bartlettii DSM
           16795]
          Length = 602

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/592 (38%), Positives = 354/592 (59%), Gaps = 15/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CGDL + +VG  V L+GWV + R  GG++F+D+RD  GI+Q++ + D +   FE A
Sbjct: 15  RTHYCGDLRMDNVGEEVILNGWVQKKRNLGGLVFVDLRDIRGISQIIFDADVSKDAFEKA 74

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + SE+V+ + G+V  R A+  N N+ TG IE+SA ++ +LS ++  P+ +  +    E
Sbjct: 75  EKLGSEYVIAVKGIVRERQAK--NPNMATGDIEISATELRVLSKSQTPPIYIKDDDNVSE 132

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLR+ ++  N++ R+R+   +R  +   NF+E  TP L   SPEGARD+LV
Sbjct: 133 DKRLKYRYLDLRKPSMQNNLIMRSRVAQIVRQYLSENNFLEIETPFLIKPSPEGARDYLV 192

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQ+LM SG DRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 193 PSRVNPGKFYALPQSPQLFKQILMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 251

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++D++  MEN++  +F+E  N + +     R+ Y +A+ R+G+DKPD R  + + ++
Sbjct: 252 FVDENDVMTMMENMIGRIFKEIHNID-IQLPLKRMTYKEAMDRFGSDKPDTRFAMELTDL 310

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++      F VFS   +      V AI A GG    ++    ++ E A++    GLA+I 
Sbjct: 311 SDLVKDCGFGVFSSAANAA-NSSVRAINAIGGADAFSKKGMKKLEEHAKTYKAKGLAWI- 368

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ E G  +   P+AK       +AI  R+D + GD   F+A             R  +
Sbjct: 369 -KVTEEGIDS---PIAKFFTEDEIKAILDRMDAKAGDLILFVADKNKVVYDALGQLRLEV 424

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479
           A+++ +I+ N +   W+ +FP +E +EE  ++   H+PFT P    ++ L   D   ++A
Sbjct: 425 ARKMDLIDKNKYNLLWVTEFPLFEEDEETGRMIAMHHPFTCPLDEDIDKLDQEDKTQLRA 484

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R    EV  + F  +G+S+E   ++FG L  AF+ G+PPH G+
Sbjct: 485 KAYDMVLNGYELGGGSVRISDEEVQEKMFKALGMSQETANDKFGYLLEAFKYGVPPHAGL 544

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G DR++MLL GA N+REV  FP +QN    +  +P      QL EL +++
Sbjct: 545 AFGFDRLMMLLTGADNIREVIAFPKNQNAICPMTNAPGLPEEGQLEELSIKV 596


>gi|222528610|ref|YP_002572492.1| aspartyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455457|gb|ACM59719.1| aspartyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 594

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  C ++ + DVG  V L+GWV   R  GGIIF+D+RD  GI QVV +        + A
Sbjct: 9   RTKYCAEVSLEDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+RSE+ + + G+V  R  ET+N  I TG+IE+ A ++ I + +E  P P+       E
Sbjct: 69  DSLRSEYCIGVRGIVEKRPPETVNPKIKTGEIEVRATELRIFNKSETPPFPIEEGINVNE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + +N++ R ++   +R  +    FIE  TP+LT S+PEGARD+LV
Sbjct: 129 AVRLKYRYLDLRRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQ +KQLLM +GFDRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 189 PSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ DD++   E +L+ +F E   G  +     R+ Y +A+ R+G+DKPD R  + + ++
Sbjct: 248 FVDVDDVIEINEKLLKAIFGEML-GIDLKLPLPRLTYKEAMERFGSDKPDTRFGMELVDI 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           T+   + EF+VFS   + N G  V AI AKG     +R   D + E+A++    GLA+I 
Sbjct: 307 TDIVKNCEFKVFSD--AANKGGSVRAINAKGCAATFSRREIDALVEFAKNFKAKGLAWIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D         P+ K L       I  RL  + GD   F A           + R  I
Sbjct: 365 VESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKDEIVFDVLGNLRLEI 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +++ + F   W+++FP +E++EEE +    H+PFT P          D   +++ 
Sbjct: 420 ARKLNLLDKSKFNLLWVVEFPLFEYSEEEGRFVAKHHPFTSPMDEDLEFLEIDPAKVRSK 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H  E+  + F  +G ++E  ++RFG L  AF+ G PPHGGIA
Sbjct: 480 AYDIVLNGTEIGGGSIRIHSPEIQKRMFKALGFTEERAQDRFGFLLEAFKYGTPPHGGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G DR+ MLLLG  ++R+   FP  ++    L  +PS V  +QLREL +++
Sbjct: 540 YGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590


>gi|224458012|ref|ZP_03666485.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|62287523|sp|Q5NIQ4|SYD_FRATT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|282158294|gb|ADA77685.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 590

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 2   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 62  LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E + G   +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 241 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 300 DMQNEEFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 359 SLSQGKEGLQSPIVKNISEETLFKVIDKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E  +++ ++   H+PFT P+   +E L   +   + +  
Sbjct: 419 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS +    +FG +  A   G P HGGIA 
Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIDR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ +
Sbjct: 536 GIDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 585


>gi|187932291|ref|YP_001892276.1| aspartyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187713200|gb|ACD31497.1| aspartyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 592

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 4   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 64  LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 123

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 124 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 183

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 184 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 242

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E + G   +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 243 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 301

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 302 DMQNEEFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 361 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 420

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E  +++ ++   H+PFT P+   +E L   +   + +  
Sbjct: 421 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS +    +FG +  A   G P HGGIA 
Sbjct: 478 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ +
Sbjct: 538 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 587


>gi|293611096|ref|ZP_06693395.1| aspartyl-tRNA synthetase [Acinetobacter sp. SH024]
 gi|292826748|gb|EFF85114.1| aspartyl-tRNA synthetase [Acinetobacter sp. SH024]
          Length = 594

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/598 (40%), Positives = 346/598 (57%), Gaps = 17/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R   T N N+++GQIE+  ++IE+L+ +E  P P+  +     E
Sbjct: 63  KARSEYVLKITGRVRRRYEGTENQNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLD+RR  +   +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EHRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  D+I++ ME +   +F +          F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLNDDEIMDLMEGMTVKLFNDLL--GVKFEKFRRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   + A+   G     R+  D   ++    G  GLAYI  
Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIVALRVPGAASLPRSAIDEYTKFVGIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G      P+ K +  +  E +  R+  QDGD  FF   D  K  + A  A R  I
Sbjct: 359 NELAKGIEGLQSPIVKFIEPIVLELLE-RVGAQDGDIVFF-GADKAKVVNDAMGALRVKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478
             +L +  C  +   W++DFP +E  ++ K     H+PFT+P+  +E +K N  + LS+ 
Sbjct: 417 GHDLNLSTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEDVKSNPGEALSV- 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG
Sbjct: 474 --AYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G+DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PK
Sbjct: 532 LAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589


>gi|291527507|emb|CBK93093.1| aspartyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 598

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/593 (39%), Positives = 350/593 (59%), Gaps = 13/593 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60
           +R+H C ++  +++G  V + GWV + R  G +IF+D+RD  GI Q+V    N  +  FE
Sbjct: 9   HRSHRCTEVSNANIGEKVTVMGWVQKRRNLGSLIFVDLRDRSGILQIVFGEENVGAEGFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A ++RSE+V+ ++G V  R+A  +N N+ TG IE+ A  I +LS A+  P  +    + 
Sbjct: 69  KAGTLRSEFVIAVEGTVQKRTA-AVNENLKTGDIEVIATSIRVLSEAQTPPFQIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LDLRR  + +N++ R+ ++  MR  M  E F+E  TPIL  S+PEGARD+
Sbjct: 128 SEDIRLKYRYLDLRRPDIQRNLMLRSNVLRVMRDFMANEGFLEIETPILCKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQ+PQ +KQLLMASG+DRYFQIA CFRDED R+DR P EF Q DME
Sbjct: 188 LVPSRIHHGHFYALPQSPQLFKQLLMASGYDRYFQIARCFRDEDLRADRQP-EFTQADME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD++   E +L+ +F+E  N + V   F R+ + +A+ R+G+DKPD R  + + 
Sbjct: 247 LSFVDIDDVIEVNERLLKHLFKEVINVD-VEIPFKRMPWQEAMDRFGSDKPDTRFGMELC 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           +V+E      F VF+  L    G  V  I  +G     R   D++ E A+  G  GLAY+
Sbjct: 306 DVSEVVKDCGFGVFTGALE--NGGSVRGINVEGQAKMPRKKIDKLVEHAKGCGAKGLAYL 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              ++E G        AK +     +A+  +++ + GD   F A       +     R  
Sbjct: 364 C--INEDGTYK--SSFAKFMTEAELDALVAKMNGKPGDLLLFAADKNKIVWNVLGALRLM 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  ELG+I+ N + F W+ +FP  EW++EE +    H+PFTMP         +D  +++A
Sbjct: 420 LGAELGLIDENKYNFLWVTEFPLLEWSDEENRFMAMHHPFTMPMEEDWDKIDSDPGAVRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G +R H  ++  + F  +G +KE    +FG L  AF  G+PPH G+
Sbjct: 480 KAYDIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKERAHEQFGFLLDAFSYGVPPHAGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DRI M +L   N++EV  FP  ++  DL+  +P TV  +QL ELG+ + 
Sbjct: 540 AFGVDRICMHMLHTDNIKEVIAFPKVKDASDLMSEAPGTVDPKQLEELGIAVA 592


>gi|208779985|ref|ZP_03247328.1| aspartyl-tRNA synthetase [Francisella novicida FTG]
 gi|208743989|gb|EDZ90290.1| aspartyl-tRNA synthetase [Francisella novicida FTG]
          Length = 590

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 2   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 62  LRSEFVIKAEGVVNLRPEGQENKNIASGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E + G   +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 241 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + +F+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 300 DMQNEDFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 359 SLSQGKDGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E  +++ ++   H+PFT P+   +E L   +   + +  
Sbjct: 419 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS E    +FG +  A   G P HGGIA 
Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ +
Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 585


>gi|254525854|ref|ZP_05137906.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537278|gb|EEE39731.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 598

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/603 (38%), Positives = 359/603 (59%), Gaps = 24/603 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R   C +L  +D+G  V L GWV R R HGG+IF+D+RDH G  Q+  NPD     F+ A
Sbjct: 2   RNKICKELNNTDIGKLVNLCGWVDRRRDHGGVIFIDLRDHSGFLQITINPDDGADLFKQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119
           +++R+E V+ + G++  R  ++IN N+ TG++EL  + +++L+ +   LP PV       
Sbjct: 62  ETLRNETVIMVSGIINERPKDSINTNLSTGELELKVKDLQVLNQIKNNLPFPVSIHDYEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLRR  L +N+  R +II   R  +    F E  TP+LT S+PEGARD
Sbjct: 122 TKEELRLKYRYLDLRRGKLLENLKTRHKIIKVAREFLDNFGFTEVETPLLTKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP+R++ G F+ALPQ+PQ +KQLLM  G D+Y+QIA CFRDED R+DR P EF QLD+
Sbjct: 182 FLVPARLSNGEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV +++I++  E++++ +++E  N N  +N F R+ +  A+  YGTD+PD R  +++
Sbjct: 241 EMSFVSEEEIISFNESLIKKIWKEVLNIN-FNNAFPRMSWQAAMDNYGTDRPDTRYQMLL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-----DRMNEWARSQGQP 354
            ++        F +F+K  ++  G  + +I  KGG  + +         + + A++ G  
Sbjct: 300 KDLGGVLGDIGFNIFTK--AIKSGGYIKSITVKGGNSSISNVRIKPGGDIFQVAQNAGAG 357

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GLA+I  + DE   +  +G +  +L+  +   I    + +DGD     AGD         
Sbjct: 358 GLAFIRVKGDE---LETIGAIKNNLSEEHIADILKITEAKDGDLILLGAGDKQIVNQSLD 414

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R +IA++L +I+ + + F W+ DFP +E NE+E + +  H+PF  P+  ++S KG+D 
Sbjct: 415 RVRQYIAKDLNLIDKSKWNFLWVTDFPMFERNEDENRYEALHHPFCSPK-NIKS-KGSDK 472

Query: 475 LSIK-----AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
           +  +     A  YDLV NG E+  G +R H + +  +    VG++ + ++ +FG L  A 
Sbjct: 473 MQKEIENSIANAYDLVLNGMELGGGSLRIHEANLQKEVLKTVGLTDKEIDEKFGFLIEAL 532

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGGIA G+DRI MLL+GA ++RE   FP +Q    LL  +PS VS  QL+EL +
Sbjct: 533 EMGAPPHGGIAFGLDRITMLLIGADSIRETIAFPKNQQAKCLLTNAPSNVSESQLKELDI 592

Query: 590 RIV 592
            I 
Sbjct: 593 EIT 595


>gi|262202244|ref|YP_003273452.1| aspartyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262085591|gb|ACY21559.1| aspartyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 600

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/596 (40%), Positives = 340/596 (57%), Gaps = 28/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTHS G L  +D    V ++GWV R R HGG++F+D+RD  G+ QVV   D      A  
Sbjct: 3   RTHSAGSLRRADATQTVTVAGWVARRRDHGGVVFIDLRDSTGLVQVVFR-DETVAAAAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R   + N N+ +G++E++A  +E+L+  E  PLP   +    E  
Sbjct: 62  LRAEFCVAVTGVVEVRPDGSENPNLASGEVEINATALEVLN--ESAPLPFQLDESPGEET 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRRD     I  R+++  + R  + A +F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLRYRYLDLRRDAPSAAIRLRSKVNAAARGVLAAHDFVEIETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 180 RLQPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E V+  +++    G  ++    R+ Y DA+RR+G+DKPDLR  I +   TE
Sbjct: 239 DQDDVIALAEEVVAALWKLI--GVEITTPIPRMTYADAMRRFGSDKPDLRFGIELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 297 FFADTPFRVFQAPY-------VGAVVMPGGASQPRRQLDAWQEWAKQRGAKGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPVAK+L+    + +   +  Q GD  FF AG      +    AR  IA  
Sbjct: 348 GEDGTLG--GPVAKNLSDAERDGLVAHVGAQPGDCVFFAAGPVKAQRALLGAARGEIASR 405

Query: 424 LGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLKGND 473
           LG+I  + + F W++D P +E  ++     D A         H+ FT P+        +D
Sbjct: 406 LGLIKDDEWAFTWVVDAPLFEPADDATASGDVALGTGAWTAVHHAFTAPKPESVDTLESD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A+ YD+VCNG EI  G IR H  E+  + F  +GI  +  + +FG L  AF  G 
Sbjct: 466 PGAALAYAYDIVCNGNEIGGGSIRIHRREIQERVFEIMGIGHDEAQEKFGFLLDAFAFGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGGIA G DRIV LL G  ++REV  FP S    D L  +P+ ++ EQ +E G+
Sbjct: 526 PPHGGIAFGWDRIVSLLAGEPSIREVIAFPKSGGGVDPLTDAPAPITPEQRKESGI 581


>gi|134302781|ref|YP_001122749.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|166225347|sp|A4J0C7|SYD_FRATW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|134050558|gb|ABO47629.1| Aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 590

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/590 (38%), Positives = 347/590 (58%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 2   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 62  LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E + G   +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 241 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 300 DMQNEEFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 359 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E  +++ ++   H+PFT P+   +E L   +   + +  
Sbjct: 419 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS +    +FG +  A   G P HGGIA 
Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ +
Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 585


>gi|326773284|ref|ZP_08232567.1| aspartate--tRNA ligase [Actinomyces viscosus C505]
 gi|326636514|gb|EGE37417.1| aspartate--tRNA ligase [Actinomyces viscosus C505]
          Length = 599

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 245/599 (40%), Positives = 339/599 (56%), Gaps = 32/599 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT + G L  SD+G  V L+GWV R R HGG+ F+D+RD  GI QVV        EIA  
Sbjct: 3   RTRNAGSLRASDIGQVVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVIRE-----EIAHD 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----Y 120
           +R+E+VL + G V +R     N N+ TG+IE+    +EIL+ +  LP  V    E     
Sbjct: 58  LRAEYVLAVTGEVSARPEGNANPNLPTGEIEVVVSDVEILNASAPLPFQVSDHAEDAGQV 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR+LDLRR  +   I  R ++  + R  + + +F+E  TP LT S+PEGARDF
Sbjct: 118 GEEARLRYRYLDLRRSAMQHAIRLRAKVSQAARRVLDSHDFVEIETPTLTRSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 178 LVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD++   E+VLR V+        +     R+ Y DA+ RYG+DKPDLR    + 
Sbjct: 237 MSFVEQDDVIAVAEDVLREVWALID--YELPTPIARMTYRDAMERYGSDKPDLRFGCELV 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T++F  + FRVF      NP      +P       R F D   EWA+ +G  GLAY+ 
Sbjct: 295 DLTDYFKDTTFRVFQ-----NPYVGAVVMPGGASQSRRTF-DAWQEWAKQRGAKGLAYV- 347

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +   GPVAK++     E +        GD  FF AG      +    AR  I
Sbjct: 348 -TVAEDGTLG--GPVAKNITDAEREGLAQAAGAAPGDCIFFAAGPVDSSRALLGAARLEI 404

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLK 470
            +  G+I+ N + F W++D P ++ + E K   D A         H+ FT P+       
Sbjct: 405 GKRCGLIDDNEWSFVWVVDAPLFKPSAEAKADGDVALGKSAWTAVHHAFTSPKPECLETF 464

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  S  A+ YD+VCNG EI  G IR H S+V  + F+ +GI ++  + +FG L  AF+
Sbjct: 465 DTDPGSALAYAYDIVCNGNEIGGGSIRIHRSDVQERVFNVMGIGEQEAQEKFGFLLDAFK 524

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            G PPHGGIA G DRIV LL  A ++R+V  FP S    D L  +P+ ++ EQ +E G+
Sbjct: 525 FGAPPHGGIAFGWDRIVSLLTRADSIRDVIAFPKSGGGFDPLTEAPAPITPEQRKEAGV 583


>gi|225021326|ref|ZP_03710518.1| hypothetical protein CORMATOL_01345 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945708|gb|EEG26917.1| hypothetical protein CORMATOL_01345 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 593

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 248/606 (40%), Positives = 342/606 (56%), Gaps = 29/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  GDL     G  V L+GWV R R HGG+IF+D+RD  GI QVV   D A  E A  
Sbjct: 3   RTHLAGDLRKETAGQTVTLTGWVARRRDHGGVIFIDLRDSSGIAQVVFR-DPAVAETAHH 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER---EYP 121
           +RSE+ + + G+V +R A + N N+ +G IE++  ++++L+ A  LP  +       E  
Sbjct: 62  LRSEFCIKVTGVVEARPAGSENPNLASGDIEVNVTELDVLNEAAALPFQIDDTAKGGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR      +  R+    + R  +   +F+E  TP LT S+PEGARDF+
Sbjct: 122 EETRLKYRYLDLRRPAQGGALRLRSEANKAARRVLEKHDFVEIETPTLTRSTPEGARDFV 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLLM +G +RY+Q+A C+RDED R+DR P EF QLDMEM
Sbjct: 182 VPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQLARCYRDEDFRADRQP-EFMQLDMEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+DI+  +E +L  +++    G T+     R+ Y +A+R YG+DKPDLR  I +  
Sbjct: 241 SFVDQEDIIAIVEEILVALWQLI--GYTIPTPIPRMTYAEAMRDYGSDKPDLRFDIKLVE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE F ++ FRVF         Y    + A G    R   D   EWA+ +G  GLAYI  
Sbjct: 299 CTEFFSNTPFRVFQN------EYVGAVVMAGGASQPRRQLDAWQEWAKQRGAKGLAYIL- 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G  +  GPVAK+L+      I   +  Q GD  FF AG+     +    AR  IA
Sbjct: 352 -IGEDGEAS--GPVAKNLSDAERNGIAAHVGAQPGDCIFFAAGETKASRALLGAARGEIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKG 471
           ++LG+I    + F W++D P +E + E K   D A         H+ FT P         
Sbjct: 409 RKLGLIKEGDWAFTWVVDAPMFEPSAEAKASGDVALGHSAWTAVHHAFTAPTDECLDTFD 468

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D  S  +  YD+VCNG EI  G IR H  +V  + F  +GI+KE  + +FG L  AF  
Sbjct: 469 TDPGSALSNAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITKEEAQEKFGFLLDAFAF 528

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G DRIV LL G  ++R+V  FP S    D L  +P+ +S +Q +E G+  
Sbjct: 529 GAPPHGGVALGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPISAQQRKETGVDF 588

Query: 592 VENPKK 597
              PKK
Sbjct: 589 --KPKK 592


>gi|325123420|gb|ADY82943.1| aspartyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 594

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/598 (40%), Positives = 346/598 (57%), Gaps = 17/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R   T N N+++GQIE+  ++IE+L+ +E  P P+  +     E
Sbjct: 63  KARSEYVLKITGRVRRRYEGTENHNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLD+RR  +   +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EHRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  D+I++ ME +   +F +          F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLNDDEIMDLMEGMTVKLFNDLL--GVKFEKFRRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   + A+   G     R+  D   ++    G  GLAYI  
Sbjct: 300 ADLMQEVEFKVFAGP-AKDPKGRIVALRVPGAASLPRSAIDEYTKFVGIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G      P+ K +  +  E +  R+  QDGD  FF   D  K  + A  A R  I
Sbjct: 359 NELAKGIEGLQSPIVKFIEPIVLELLE-RVGAQDGDIVFF-GADKAKVVNDAMGALRVKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478
             +L +  C  +   W++DFP +E  ++ K     H+PFT+P+  +E +K N  + LS+ 
Sbjct: 417 GHDLNLSTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTLPKSSVEDVKSNPGEALSV- 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG
Sbjct: 474 --AYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G+DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PK
Sbjct: 532 LAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589


>gi|328675296|gb|AEB27971.1| Aspartyl-tRNA synthetase/Aspartyl-tRNA(Asn) synthetase [Francisella
           cf. novicida 3523]
          Length = 591

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/596 (38%), Positives = 351/596 (58%), Gaps = 9/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F +A S
Sbjct: 2   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFRVADS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI++G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 62  LRSEFVIKAEGVVNLRPEGQENKNIVSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E + G   +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 241 DEAFIMSTMERMIAGLFKE-TIGVEFTTPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + +F+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 300 DMQNEDFKVFSGPAN-DPQSRVIAMRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 359 SLSQGKDGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + + + +   W++DFP +E  +++ ++   H+PFT P+   +E L+ ++   + +  
Sbjct: 419 DLVLFDKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEELERSNPEELSSRA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS E    +FG +  A   G P HGGIA 
Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ + +   K
Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAVKKEESK 591


>gi|325995895|gb|ADZ51300.1| Aspartyl-tRNA synthetase [Helicobacter pylori 2018]
          Length = 577

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/589 (38%), Positives = 345/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKIIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R A   N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKHVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+    G+T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQAIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E       GP+ K L+    ++I  + D+Q GD  FF AGD      +    R  +A+
Sbjct: 358 ENEV-----KGPLVKFLSEKGLKSILEKTDVQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|291541881|emb|CBL14991.1| aspartyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 592

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/592 (39%), Positives = 342/592 (57%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62
           RT  CGDL + DVG  V + GWV R R  G +IF+D+RD  GI Q+  N   D   F+ A
Sbjct: 10  RTDYCGDLRIGDVGREVTVCGWVQRCRDLGQLIFIDLRDRTGIVQLAFNDKTDKEIFDKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S RSE+VL   G+V  RS++  N+ I TG IE+    + +LS A+  P  +  +    E
Sbjct: 70  FSCRSEFVLAAKGVVCERSSK--NSEIPTGDIEVVVSDMRVLSKAQTPPFEIVDDTNTNE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  L  N++ R++I    R       F+E  TP++  S+PEGARD+LV
Sbjct: 128 ELRLKYRYLDLRRRPLLNNLMMRSKIAKVARDYFHDNGFVEIETPMMIKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQ+PQ YKQLLM SGFDRY Q+A CFRDED R+DR P EF Q+DME+S
Sbjct: 188 PSRIHNGKFYALPQSPQIYKQLLMLSGFDRYIQLARCFRDEDLRADRQP-EFTQIDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ D+IL   E   + +F+E  N + +  +F R+ Y +A+  YG+DKPD+R  + + ++
Sbjct: 247 FVDVDEILEINEGFFKKLFKEVLNID-LEEHFQRMTYKEAMESYGSDKPDIRFDMKIQDI 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++      F VF+   ++  G  V AI AK       R   D++ E+A+  G  GLAY+ 
Sbjct: 306 SDLVKDCGFSVFTS--AIENGGSVRAIVAKNASSVYTRKEIDKLTEYAKGIGAKGLAYVR 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W +DE           K ++     AI  RL  + GD    +A       S     R  +
Sbjct: 364 W-VDEPN-----ASFKKFMSEEELSAIYERLGAEKGDVILIVADKNSTVLSTLGALRLVV 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ L II  + F+F WI+DFPF+E++EE  +    H+PFTMP+         D   + A 
Sbjct: 418 AKRLDIIP-DVFKFLWIVDFPFFEYDEESGEWLAMHHPFTMPKEECLQYLDTDPSKVIAK 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDL  NG E++SG +R    E+  + F  + ++ E +E +FG L  A++ G PPHGG+ 
Sbjct: 477 AYDLTLNGVELSSGSMRITDYELQQKMFKALKLTDEEIEAKFGFLVEAYKYGAPPHGGMG 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+ ML+  A ++R+V+ FP  QN  +L+   P+ V  E L  LG+++V
Sbjct: 537 IGLDRVTMLMCKADSLRDVTAFPKVQNASELMSACPAEVDDESLEVLGIKVV 588


>gi|83590512|ref|YP_430521.1| aspartyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|97196732|sp|Q2RHW1|SYD_MOOTA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|83573426|gb|ABC19978.1| aspartyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 600

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 235/590 (39%), Positives = 350/590 (59%), Gaps = 13/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIA 62
           +R+H CG+L  +D G  V L GWVHR R HGG+IF+D+RD  G+ QVV +P S   F+ A
Sbjct: 11  HRSHGCGELTAADAGKEVTLMGWVHRRRDHGGLIFIDLRDRSGLVQVVCDPKSGPAFQKA 70

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+V+ + GLV  R   T+N  + TG+IE+ A++  +L+ A+  P  +    +  E
Sbjct: 71  EEVRNEYVVAVRGLVRRRPEGTVNPKLPTGEIEVVAEEFRLLNRAKTPPFYIDDGIDVDE 130

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YR+LDLRR  + + +  R R   ++R  + A  F E  TP+LT S+PEGARDFLV
Sbjct: 131 ALRLRYRYLDLRRPEMQRLLYLRYRTTRAIRDFLDARGFWEIETPMLTRSTPEGARDFLV 190

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQ +KQ+LM +G +RYFQI  CFRDED R+DR P EF QLDMEMS
Sbjct: 191 PSRLRPGEFFALPQSPQLFKQILMVAGVERYFQIVRCFRDEDLRADRQP-EFTQLDMEMS 249

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++DIL  +E ++  VF E + G  ++    R+ Y +A+ RYG+DKPD+R  + + +V
Sbjct: 250 FVQREDILKLVEELMAYVFRE-TLGVELALPLPRLTYREAMDRYGSDKPDIRFGMEIVDV 308

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++      F+VF++  +V  G  V  + A G  G +R   D +   A   G  GLA++  
Sbjct: 309 SDLVAGCGFKVFAE--AVARGGVVRGLCAPGCAGYSRRELDELTRQAAVFGAKGLAWM-- 364

Query: 362 RLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               +    G+  P+AK       E +  RL  + GD   F+A       +     R  +
Sbjct: 365 ----AVTPEGIRSPIAKFFTSGELEGLVARLAGKPGDLLLFVADTETTAATALGALRLEM 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + L + +     F W+ +FP  E++ EEK+    H+PFTMP      L  +D L ++A 
Sbjct: 421 GRRLHLYDPEQLAFTWVTEFPLLEYSAEEKRYVAVHHPFTMPMEEDWPLLDSDPLRVRAL 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H  ++  + F+ +G + E   ++FG L  AF+ G PPHGGIA
Sbjct: 481 AYDLVLNGVELGGGSIRIHRRDIQEKMFNLLGFTPEAARDKFGFLLDAFEYGTPPHGGIA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G+DR++ML+     +R+   FP +Q+   L+  +PS VS EQL+EL LR
Sbjct: 541 FGLDRMLMLMARRDTIRDCIPFPKTQSGTCLMTAAPSGVSPEQLQELHLR 590


>gi|150016423|ref|YP_001308677.1| aspartyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|189082090|sp|A6LTP1|SYD_CLOB8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|149902888|gb|ABR33721.1| aspartyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 599

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 243/598 (40%), Positives = 362/598 (60%), Gaps = 17/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+     VG  + L GWV R R  G + F+D+RD  GI QVV   +  +  FE A
Sbjct: 10  RTMMCGEPREEHVGKKITLMGWVQRNRKLGALEFVDLRDKTGIMQVVFGEEINAEAFEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K VRSE+ + + G V+ R  E++N N+ TG +EL  + I+ILS +E  P+ +  + +  E
Sbjct: 70  KGVRSEYCVAVTGEVVKR--ESVNENMPTGFVELKCENIKILSESETPPIYIKEDLDAAE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR  +HK    R++   ++R  +   NF++  TPIL+ SSPEGARD+LV
Sbjct: 128 NIRLKYRYLDLRRSDMHKIFEIRSKTTKAIRDYLEENNFLDVETPILSKSSPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FYALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYPGMFYALPQSPQIFKQLLMVSGFDRYYQIAKCFRDEDLRANRQP-EFTQVDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQ+DI+   E ++  VF++ + G  V     R+ + DA+ +YG+DKPDLR  + + N+
Sbjct: 247 FVEQEDIMAVNEGLIAHVFKKVA-GVDVQLPIKRMTFKDAMEKYGSDKPDLRFGMEITNI 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE     +F VF    ++  G  V A+  K G    R   D++ E+ ++    GLA+I  
Sbjct: 306 TEDVKDLDFVVFKS--AIEAGGSVRALCLKCGADLGRKPLDKLGEFVKTYKAKGLAWI-- 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           ++ E G  +    +AK L    T +I   ++ + GD+   +A  + + F S  A  R  +
Sbjct: 362 QIKEDGVKSS---IAKFLTDDVTNSIVKTMNAETGDAILIVADKNSVVFQSLGA-LRLEL 417

Query: 421 AQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           A++  +I + N F F WI +FP +E++EEE++    H+PFT P         +D  ++++
Sbjct: 418 AKQFDLIKDKNEFNFTWITEFPLFEYSEEEERYKACHHPFTAPMDEDLDFIESDPGNVRS 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG E+  G IR H + +  + F  +G++ EVV  RFG L +AF+ G PPHGG+
Sbjct: 478 KAYDLVLNGEELGGGSIRIHDTALQERMFRALGLTDEVVNERFGYLLQAFKFGPPPHGGL 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR++M L G +N+++V  FP +QN    L  +P+ V  +QL ELG+ I+   +K
Sbjct: 538 AFGLDRMIMFLAGTENIKDVIAFPKNQNAYCYLSEAPNIVDEKQLTELGIAILPKEEK 595


>gi|51598701|ref|YP_072889.1| aspartyl-tRNA synthetase [Borrelia garinii PBi]
 gi|62287544|sp|Q661H4|SYD_BORGA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|51573272|gb|AAU07297.1| aspartyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 586

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 225/594 (37%), Positives = 346/594 (58%), Gaps = 18/594 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+   +    +IA+
Sbjct: 2   FKVIKCNELNEKLINKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLIT-EEHLLKIAE 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + I GL+  R    IN N+ TG  E+ A+ IEI+S   ELP  +  +    E+
Sbjct: 61  KIKLEYCIKIQGLLSKRPPNMINENMKTGSFEILAKNIEIISKCNELPFMIEDDNNASEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + KYR+LDLRRD+L   I+ R +  + +R  ++ + F+E  TP    S+PEGARDF++P
Sbjct: 121 SKLKYRYLDLRRDSLKNKIILRCQATHLIRNFLVKKKFLELETPTFVKSTPEGARDFVIP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++++I   +EN+L  +F+   N   +   F +I Y  A+ +YG+DKPD R  + + +++
Sbjct: 240 VKKENIFKLIENMLFLIFKNCLNI-KLPKKFKKITYKTAMNKYGSDKPDTRFELTLQDIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
            +  +SEF VF + L      ++  +  +    +RA  + + E A+     GL   F ++
Sbjct: 299 RNLKNSEFNVFKETLKNKGSIKILIVKDEADKFSRAKINNLEEIAKLYKTQGLY--FAKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422
           +   N    G +AK L     + I+    +++ D  FF A    +  C      R  IA 
Sbjct: 357 E---NNKFSGGIAKFLKTEEQQLIKT-YSLENNDIIFFTANKKWETACKAMGQIRIKIAN 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMESLKGNDLLSIK 478
           +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+      +E +    +  I 
Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYTPAHHMFSLPKKRYIASLEKIPNKTIGEI- 471

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YDLV NG E+ SG IR H  E+  + F+ +G  KE  E+RFG   +A + G P HGG
Sbjct: 472 ---YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGG 528

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IA GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV
Sbjct: 529 IAIGIDRLIMLMTKSTSIKDVILFPKNSFATSPLDDSPSKISNEQLKELGINIV 582


>gi|170759107|ref|YP_001788374.1| aspartyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|238688786|sp|B1L096|SYD_CLOBM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169406096|gb|ACA54507.1| aspartate--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 593

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/595 (40%), Positives = 359/595 (60%), Gaps = 18/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+   +++G  V + GWV R R  GG+IF+D+RD  GI Q+V   +     FE +
Sbjct: 10  RTIMCGEPRENNIGQKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEKS 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +V+SE+ + + G ++ R  ++ N ++ TG +EL  + I+ILS +E  P+ +    +  E
Sbjct: 70  DNVKSEYCIAVTGEIVKR--QSPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDASE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR  + K  + R +    +R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 128 NIRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+E+DD++   E +L  VF+E + G  V     R+ Y  A+ +YG+DKPDLR  + ++++
Sbjct: 247 FIEEDDVIELNERLLAKVFKEVA-GIDVKLPIERMPYKIAMEKYGSDKPDLRFGMEINDL 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           TE   +SEF+VF    ++  G  V AI A       R   D++ ++ ++    GLA+I +
Sbjct: 306 TEAVKNSEFKVFKG--AIEAGGSVRAIKAGNCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           + DE  +     P+AK L     +AI  ++D + GD    +A  + + F S  A  R H+
Sbjct: 364 KEDEIKS-----PIAKFLTEEEMKAILEKMDAKVGDLILIVADKNNVVFESLGA-LRLHL 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL IIN + F F WI +FP   +NEEE +    H+PFT        L   D   ++A 
Sbjct: 418 AKELDIINKDEFRFVWITEFPLLSYNEEEGRYQAEHHPFTALMDEDVELLDTDPGKVRAK 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H S++  + F+ +G +KE    RFG L  AF+ G PPHGG+A
Sbjct: 478 AYDIVLNGEELGGGSIRIHDSKLQEKMFNVLGFTKEKAWERFGFLLEAFKFGPPPHGGLA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR++M L G +N+++V  FP +QN FC  L  +P+ V   QL ELG++ +E 
Sbjct: 538 YGLDRMIMFLAGTENIKDVITFPKNQNAFCP-LTEAPNVVDENQLEELGIKKIEK 591


>gi|319947812|ref|ZP_08022006.1| aspartyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319438536|gb|EFV93462.1| aspartyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 600

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 238/596 (39%), Positives = 340/596 (57%), Gaps = 28/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTHS G L  +D G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +    E A  
Sbjct: 3   RTHSAGQLRAADAGDTVTLAGWVARRRDHGGVIFVDLRDASGVCQVVFRSEDVA-ERAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R   + N N+ +G+IE+     E+L  A  LP  +  + E  E  
Sbjct: 62  LRNEYCVAVTGVVDRRPEGSENPNLASGEIEIDVTSFEVLGEAAALPFQL--DDEVGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR+     +  R+++  + R  +   +F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLRHRYLDLRREGPGAALRLRSKVNAAARGVLARHDFVEIETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G+FYALPQ+PQ +KQLLM +G ++Y+Q+A C+RDED R+DR P EF QLD+EMSFV
Sbjct: 180 RLQPGTFYALPQSPQLFKQLLMVAGMEKYYQLARCYRDEDFRADRQP-EFTQLDVEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E +L  V+   + G  ++    R+ YD+A+RRYG+DKPDLR  I +   TE
Sbjct: 239 DQDDVIAVAEEILTEVWA--TAGYEITTPIPRMTYDEAMRRYGSDKPDLRFDIELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  + FRVF           V A+  KGG    R   D   EWA+ +G  GLAYI   +
Sbjct: 297 FFADTPFRVFKAPY-------VGAVVMKGGASQPRRQLDAWQEWAKQRGAKGLAYIL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G +   GPVAK+L+      I   +  + GD  FF AG      +    AR  IA +
Sbjct: 348 GDDGELG--GPVAKNLSDSERAGIAAHVGAEPGDCIFFGAGAVKSTRALLGAARGEIAAK 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473
           LG+I+   + F W++D P +E  ++     D A         H+ FT P+         D
Sbjct: 406 LGLIDPTKWAFTWVVDAPMFEPADDATAAGDVAVGSGAWTAVHHAFTSPKPEHLDTFDTD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  A+ YD+VCNG EI  G IR H  ++  + F  +GIS E  + +FG L  AF  G 
Sbjct: 466 PGSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFGVMGISAEEAQEKFGFLLDAFSYGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGGIA G DRI  LL G +++R+V  FP S    D L  +P+ ++ +Q +E G+
Sbjct: 526 PPHGGIAFGWDRICALLAGTESIRDVIAFPKSGGGVDPLTDAPAPITAQQRKESGI 581


>gi|300871060|ref|YP_003785932.1| aspartyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300688760|gb|ADK31431.1| aspartyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 587

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/595 (39%), Positives = 352/595 (59%), Gaps = 13/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           R+++   G L  +D+G  V+L+GWV R R HGG+IF+D+RD  G  Q+V NP+       
Sbjct: 2   RFKSAYNGILTKNDIGKEVKLAGWVLRRRDHGGVIFVDLRDRTGFVQIVFNPEISKEAHN 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ ++G V +RS E IN  I TG+IE+  +K+E+L+ +E  P  +  + + 
Sbjct: 62  NAQDLRSEYVISVEGKVRARSEEMINPKIPTGEIEVMVEKMELLNTSETPPFLLEDDIDT 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LDLRR  +  N+ KR  I N+ R  +    FI+  TPIL  S+PEGARDF
Sbjct: 122 GEDIRLKYRYLDLRRTKVFNNLYKRFEITNAFRKHLADNGFIDVETPILNKSTPEGARDF 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQ+PQ +KQ+LM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E
Sbjct: 182 LVPSRLNAGDFYALPQSPQIFKQILMIGGFERYYQVAKCFRDEDLRADRQP-EFTQVDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  D+ L+ ME V+  + ++  N + +   F R+ Y DA+  YG+DKPD R  + + 
Sbjct: 241 TSFLNTDEFLSIMEKVVSNIVKDVYNID-LKTPFPRLNYYDAMEMYGSDKPDTRFELKLI 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           NV E     +F VF   L  +  + +  + AKGG    +R   D   ++    G  GLA+
Sbjct: 300 NVEEAVRGCDFAVFKNAL--DNKFIIRCLNAKGGVDKLSRKDIDDFTKYVGIFGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  R+ E+G  +    + K  +  N + I      + GD  FF+A  P        + R 
Sbjct: 358 M--RVTENGLESN---IVKFFSEENQKKILEVTKAEKGDLLFFVADTPKVTFDALGNLRL 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A++L +I+ +   F W+++FP +E++ +EK+I   H+PFT P     ++  ++ L ++
Sbjct: 413 RVAEKLNLIDKDKLNFLWVVEFPLFEYDHKEKRISATHHPFTAPVPEDVAILESEPLKVR 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG EI  GG R + S+V    F  +GI +E  + RFG L  A + G PP  G
Sbjct: 473 SDTYDLVLNGNEIGGGGQRIYDSKVQATIFKLLGIDEEKAKIRFGFLLDALKYGAPPMCG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +A GIDR++MLL    ++REV  FP +Q    L+   PSTV  +QL EL L I E
Sbjct: 533 MAFGIDRVIMLLQKQDSIREVIAFPKTQKGQCLMSSCPSTVDADQLEELHLSIEE 587


>gi|313608678|gb|EFR84515.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 591

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/594 (39%), Positives = 340/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGTVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I    E++L  V +E  N  T+   F R+ Y +A+ R+G+DKPD+R  + + NV
Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           ++     +F+VF   +  N G EV AI AK    N  R   D +  +  + G  GLA   
Sbjct: 302 SDVVKDVDFKVFQSAIE-NDG-EVKAINAKSAAANFSRKDLDALGIFVANYGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E+G +   GP+AK         ++  L  +DGD   F A       +     RN +
Sbjct: 357 WLKVEAGELK--GPIAKFFPEDKAAELKGALQAEDGDLLLFAADKADIVAASLGALRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A 
Sbjct: 415 GKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA
Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+ 
Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSAAQLAELKLETVKK 588


>gi|219685156|ref|ZP_03539976.1| aspartate--tRNA ligase [Borrelia garinii Far04]
 gi|219673252|gb|EED30271.1| aspartate--tRNA ligase [Borrelia garinii Far04]
          Length = 586

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/594 (38%), Positives = 345/594 (58%), Gaps = 18/594 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+   +    +IA+
Sbjct: 2   FKVIKCNELNEKLINKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLIT-EEHLLKIAE 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + I GL+  R    IN N+ TG  E+ A+ IEI+S   ELP  +  +    E+
Sbjct: 61  KIKLEYCIKIQGLLSKRPPNMINKNMKTGSFEILAKNIEIISKCNELPFMIEDDNNASEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + +YR+LDLRRD+L   I+ R +  + +R  ++ +NF+E  TP    S+PEGARDF++P
Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHFIRNFLVKKNFLELETPTFVKSTPEGARDFVIP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++++I   +EN+L  +F+   N   +   F +I Y  A+ +YG+DKPD R  + + +++
Sbjct: 240 VKKENIFKLIENMLFLIFKNCLNI-KLPKKFKKIAYKTAMNKYGSDKPDTRFELTLKDIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
            +  +SEF VF   L      ++  +  K    +RA  + + E A+     GL   F ++
Sbjct: 299 RNLKNSEFNVFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGL--YFTKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADARNHIAQ 422
           +   N    G +AK L     + I+    +++ D  FF A    +  C      R  IA 
Sbjct: 357 E---NNKFSGGIAKFLKTEEQQLIKT-YSLENNDIIFFTANKKWESACKAMGQIRIKIAN 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMESLKGNDLLSIK 478
           +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+      +E      +  I 
Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYTPAHHMFSLPKKRYIASLEKTPNKTIGEI- 471

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YDLV NG E+ SG IR H  E+  + F+ +G  KE  E+RFG   +A + G P HGG
Sbjct: 472 ---YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGG 528

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IA GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV
Sbjct: 529 IAIGIDRLIMLMTKSTSIKDVILFPKNSFAASPLDDSPSKISDEQLKELGINIV 582


>gi|255562164|ref|XP_002522090.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223538689|gb|EEF40290.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 668

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/597 (40%), Positives = 349/597 (58%), Gaps = 24/597 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG+L V+DVG  V L GWV   R HGG+ FL++RDH G  QV   PD       I 
Sbjct: 80  RTGLCGELSVNDVGKRVLLCGWVALHRVHGGLTFLNLRDHTGTVQVTTLPDEFPDAHSII 139

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF----GE 117
             +R E+V+ ++G+V SR  E++N  + TG +E++A+ ++IL +V  +LP  V      +
Sbjct: 140 NDLRLEYVVAVEGVVRSRPTESVNKKMKTGLVEVAAENVQILNAVRTKLPFLVTTADDAK 199

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPE 175
               E IR ++R LDLRR  ++ N++ R R++  +R R + +   F+E  TPIL+ S+PE
Sbjct: 200 DSVKEEIRLRFRCLDLRRQQMNFNMMLRHRVVKLIR-RYLEDVYGFVEIETPILSRSTPE 258

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARD+LVPSRV  G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF 
Sbjct: 259 GARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFT 317

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           QLDME++F   +D+L   E+++R VF E   G  + N F R+ Y +A+ RYG+D+PD R 
Sbjct: 318 QLDMELAFTPLEDMLKLNEDLIRKVFLEI-KGVQLPNPFPRLTYAEAMSRYGSDRPDTRF 376

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAF--CDRMNEWARSQG 352
            + + +V++ F+ S FRVF+  L+     +V  +P+      N A    D  NE  +S G
Sbjct: 377 DLELIDVSDIFLESPFRVFADSLNKGGIIKVLCVPSGAKSYSNTALKKGDIYNEATKS-G 435

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
             GL   F ++ + G V G+  +   L+ +  E +  R     GD   F  G        
Sbjct: 436 AKGLP--FLKVLDDGEVEGIAALVSSLDPMKKEELLRRCSAGPGDLILFAVGHYASVNKT 493

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKG 471
               R  IA E+G+I+ +     W+ DFP +EWN+ E++++  H+PFT P    ME    
Sbjct: 494 LDRLRMFIANEMGLIDHSRHSILWVTDFPMFEWNDTEQRLEALHHPFTAPNPEDME---- 549

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            DL S +A  YD+V NG EI  G +R +  E+  +    VGIS E  E +FG L  A   
Sbjct: 550 -DLSSARALAYDMVYNGVEIGGGSLRIYKREIQQKVLEIVGISAEQAEEKFGYLLEALDM 608

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           G PPHGGIA G+DR+VMLL  A ++R+V  FP +      L  +PS V  +QL++L 
Sbjct: 609 GAPPHGGIAYGLDRLVMLLADANSIRDVIAFPKTTTAQCALTRAPSEVGPQQLKDLS 665


>gi|312148395|gb|ADQ31054.1| aspartyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 586

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/592 (39%), Positives = 353/592 (59%), Gaps = 12/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+ N +    +IA+
Sbjct: 2   FKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVN-EEKLLKIAE 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + I GL++ R    INAN+ TG  E+ A+ IEI+S   ELP  +  +    E+
Sbjct: 61  KIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + +YR+LDLRRD+L   I+ R +  + +R  +I   F+E  TP    S+PEGARDF++P
Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++++I   +EN+L  +F+   N N +   F +I Y  A+ +YG+DKPD R  + + +++
Sbjct: 240 VKKENIFKLIENMLFLIFKNCININ-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
            +  +SEF +F   L      ++  +  K    +RA  + + E A+     GL   F ++
Sbjct: 299 RNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY--FTKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422
           +   N    G +AK L     E I+    +++ D  FF A +  K  C      R  IA 
Sbjct: 357 E---NNKFSGGIAKFLKTEEQELIKT-YSLENNDIIFFTANNNWKTACKAMGQIRIKIAN 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481
           +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+   + +L+ N   +I    
Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI- 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE +E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV+
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583


>gi|306826463|ref|ZP_07459774.1| aspartate--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304431322|gb|EFM34320.1| aspartate--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 582

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/594 (39%), Positives = 353/594 (59%), Gaps = 25/594 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++   
Sbjct: 3   RSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++G V +R  +  N  + TG +EL    + IL+ A+  P  +  + E  
Sbjct: 63  AERLRSEYVIEVEGFVEAR--QQANDKLATGMVELKVSALTILNTAKTTPFEIKDDVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +T      +F+VFS   +V       AI  KG     +R   D++ E+A+  G  GLA  
Sbjct: 299 LTVTVKGIDFKVFSDAPAVK------AIVVKGNADRYSRKDIDKLAEFAKQFGAKGLA-- 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            W     G  +  GPVAK L  + TE +  +L + + D   F+A D L+  +    A RN
Sbjct: 351 -WVKVTDGQFS--GPVAKFLTAIETE-LSSQLKLAENDLVLFVA-DTLEVANNTLGALRN 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSI 477
            IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P       L+GN L+ +
Sbjct: 406 RIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGN-LVKV 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHG
Sbjct: 465 RAIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR VMLL    N+REV  FP +    D +  +PS VS  QL EL L+I
Sbjct: 525 GLAIGLDRFVMLLAEKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQI 578


>gi|307637304|gb|ADN79754.1| Aspartyl-tRNA synthetase/Aspartyl-tRNA(Asn) synthetase
           [Helicobacter pylori 908]
          Length = 577

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/589 (38%), Positives = 345/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKIIKVAGWGNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R A   N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKHVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+    G+T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQAIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E       GP+ K L+    ++I  + D+Q GD  FF AGD      +    R  +A+
Sbjct: 358 ENEV-----KGPLVKFLSEKGLKSILEKTDVQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|218961818|ref|YP_001741593.1| aspartyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167730475|emb|CAO81387.1| aspartyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 593

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 244/594 (41%), Positives = 348/594 (58%), Gaps = 15/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG+L    +G  V + GWV++ R  GG+IF+D+RD  GI QVV  P+    F  A+
Sbjct: 10  RTHYCGNLNTEHIGQEVTVMGWVNKRRDLGGLIFIDLRDVKGILQVVIRPEKPEIFAKAE 69

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+V+ + G + +R+   IN N+ TG+IEL A++  IL+ A+ LP+         E 
Sbjct: 70  KVRNEYVIAVRGKICARTEPNINPNLPTGKIELEAEEFYILNDAQPLPVQFSEVAMAEED 129

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R  YR+LDLRR  L K I+ R RI+  +R  +  E F E  TPIL  S+PEGARD+LVP
Sbjct: 130 LRLTYRYLDLRRPKLQKIIITRHRIMQIIREFLNNEGFYEIETPILMKSTPEGARDYLVP 189

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+  G FYALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QLD+E+SF
Sbjct: 190 SRMQPGKFYALPQSPQMFKQLLMIAGLDRYYQIARCFRDEDLRADRQP-EFTQLDIELSF 248

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V Q  I + +E +   +F+E   G  +S  F  I Y +A+  YG DKPD+R  + + +++
Sbjct: 249 VSQAQIFDLIERLFAKLFQEVL-GYNLSVPFPVIPYAEAMENYGCDKPDIRFEMKLFDIS 307

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
               +S F VFS  L      +  AIP K    +R   D + E A+  G  G+A  F ++
Sbjct: 308 NIVKNSGFNVFSAALKNGGVVKAIAIP-KAADFSRKQQDELVELAKHLGGKGIA--FAKV 364

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E+G   G   ++K L+    EAI      Q  D   F A +        A  RN +A +
Sbjct: 365 TENGLEGG---ISKFLSPEEAEAIIQATQAQKNDLLAFAADNYEMVSKVLAGIRNFLAPQ 421

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL----SIKA 479
           L +I  N F FCWI DFP +  N E  K + AH+ FT+P+   E +   D+      I  
Sbjct: 422 LNLIPENSFAFCWITDFPLFTKNLETGKWEPAHHMFTLPKE--EHIPYLDIPEKIGEIIG 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLVCNG E++SG IR H  ++  + F  +G S+E ++ RFG    A + G PPHGGI
Sbjct: 480 QLYDLVCNGVELSSGSIRCHRYDIQKKIFDILGFSEEELQKRFGFFLEALKYGTPPHGGI 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DR+VM++ GA+++R+V  FP +    DL+  +PS V  +Q ++L L+ ++
Sbjct: 540 APGLDRLVMIMTGAESIRDVIAFPKTLKATDLMSQAPSEVDEQQWKDLHLQPIK 593


>gi|282892399|ref|ZP_06300749.1| hypothetical protein pah_c253o018 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281497801|gb|EFB40162.1| hypothetical protein pah_c253o018 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 581

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/585 (38%), Positives = 342/585 (58%), Gaps = 13/585 (2%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCI 73
           D G+ V LSGWVHR R HGG+IF+D+RD YG+TQ+V +P++  A   +++ +RSEWV+ I
Sbjct: 5   DTGTSVILSGWVHRRRDHGGLIFIDLRDRYGLTQLVFDPETNAAAHAVSEKLRSEWVISI 64

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLD 132
            G V+ R+ +  N  + TG IE+    IE+LS A+  P  +  E  E  E +R KYR+LD
Sbjct: 65  QGHVIERTLDMKNPKLATGDIEVVVDHIEVLSTAKTPPFSICDESIEVHEELRLKYRYLD 124

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +RR  + + ++ R + + + R  +    F+E STPIL  S+PEGARD+LVPSRV+ GSFY
Sbjct: 125 IRRGDVAEKLIVRHKAMLTTRNYLSQRGFLEISTPILGKSTPEGARDYLVPSRVHPGSFY 184

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           ALPQ+PQ +KQLLM +G DRYFQIAPCFRDED R+DR P EF Q+D+EMSF   D ++  
Sbjct: 185 ALPQSPQIFKQLLMVAGMDRYFQIAPCFRDEDLRADRQP-EFTQIDLEMSFATPDILIPI 243

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +E +++ +F+E  +   + ++F  + +   + +YG D+PD+R  + +  + +    S F 
Sbjct: 244 IEGLIQTLFKECCSIE-IPSSFETLSHAICMEKYGCDRPDMRFEMTLSTLDDIVAGSSFS 302

Query: 313 VFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
           VF  +  +  G  V  I  KGG    R   +   E+    G  GLA   W   + G +  
Sbjct: 303 VF--LDQLREGGTVKGICVKGGSDITRKGIETYTEFVGRFGINGLA---WMKMQEGTLTS 357

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
              + K       + +  RL +++GD  F +A             R  IA++  +I  N 
Sbjct: 358 N--IVKFFTPEQQQQLIERLQVENGDLIFMVADQKSSTNQALDHLRRRIAKDRNLIPSNT 415

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
           + F W+ DFP + WN +E++++  H+PFT P      L  +D L +++  YDLV NG+E+
Sbjct: 416 YRFLWVRDFPLFNWNPDEQRLESEHHPFTSPLPEDLHLLDSDPLKMRSSGYDLVLNGYEV 475

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R H SE+  + F  + ++ E ++ +FG    A   G PPH G+A G+DR+VMLL 
Sbjct: 476 GGGSQRIHSSELQQKIFEKLKLTPEELKTKFGFFLEALSFGTPPHLGLALGLDRLVMLLT 535

Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G  N+R+V  FP +Q   DL++  PS V  +QL ELG+ + E  K
Sbjct: 536 GTDNIRDVIAFPKTQKASDLMLECPSLVVKKQLHELGISVEEEKK 580


>gi|238022339|ref|ZP_04602765.1| hypothetical protein GCWU000324_02246 [Kingella oralis ATCC 51147]
 gi|237866953|gb|EEP67995.1| hypothetical protein GCWU000324_02246 [Kingella oralis ATCC 51147]
          Length = 602

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/598 (38%), Positives = 359/598 (60%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +  + +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F +A 
Sbjct: 2   RTNYCGLINEAYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           + R+E+VL I G V +R   T N  +++G+IE+ A++IEIL+ A   P  +  +    E+
Sbjct: 62  TARNEFVLSITGRVRNRPEGTTNDKMVSGKIEILAKEIEILNPAATPPF-MIDDENISET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R + R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLQNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHAGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I++  E +++ +F +  N +    +F R+ Y +A+ +YG+DKPD+R  +    +T
Sbjct: 240 LNENEIMDITEGMVKQIFHDTMNVDL--GDFPRMLYSEAMFKYGSDKPDMRVSLAFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DVMKTEEFKVFRAAADMPNGRVVALRVPNGAKLSRKDIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++  N++         P+ K L+    + I  R   Q+GD  FF   D  K  + A  A 
Sbjct: 356 NDVNNLSNGEDSGLQSPIVKFLSEGCLKTIIERTGAQNGDLIFF-GADKAKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  +    + ++  W++DFP +E++EEE +    H+PFT P+ G E L    
Sbjct: 415 RIKVGHEHGAADGYFVDEWKPLWVVDFPMFEYDEEENRYTAMHHPFTSPKAGHEDLMETQ 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H +EV  + F+ + I+ E  +N+FG L    + G 
Sbjct: 475 PENCLARAYDMVLNGWEIGGGSIRIHRAEVQEKVFAALKITPEEQQNKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q   DLL+ +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMAGAESIRDVIAFPKTQRAQDLLVDAPNSVDEKQLRELSLRL 592


>gi|82701736|ref|YP_411302.1| aspartyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|97196742|sp|Q2YBG1|SYD_NITMU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|82409801|gb|ABB73910.1| aspartyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 588

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/589 (39%), Positives = 343/589 (58%), Gaps = 7/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG + V  +   V L GWVHR R HGG+IF+D+RD  G+ QVV +PD+   F++A+
Sbjct: 2   RTNYCGLIDVQYLDQTVILYGWVHRRRDHGGVIFVDLRDREGLVQVVCDPDNPTAFQVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+V+ I G V  R   T+N N+I+G+IE+    I+IL+ +   P  +  +    E+
Sbjct: 62  KIRNEFVVRITGRVRHRPPGTVNPNLISGEIEVLVSSIDILNASLTPPF-LMDDESLSEA 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R ++R+LDLRR  + +N+  R ++  ++R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLEHRYLDLRRPQMQENLRLRYKVAMAVRLFLDQHGFIDVETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVNTGHFFALPQSPQLFKQLLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +  I+  ME ++  VF+   N + +   F R+ + +A+ +YG+DKPD+R  +++  +T
Sbjct: 240 LNESQIMQMMERMICTVFKSVRNID-LPTPFPRLTHGEAMSKYGSDKPDMRVSLVLTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF +  ++  G  V A+   GGG  +R   D    +    G  GLAYI   
Sbjct: 299 DVMQEVEFKVFREA-ALRTGGRVAALRVPGGGALSRKEIDDYTGFVAIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G      P+ K L     + +  R   +DGD  FF A             R  +  
Sbjct: 358 ALEKGMDGLQSPILKFLPENVIQIVLERTGAKDGDLIFFGADKAQVVNEALGALRAKVGH 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           + G+     ++  W++DFP +E +EEE +    H+PFT P  G E L   D     +  Y
Sbjct: 418 DRGLAESG-WKPLWVVDFPMFERDEEENRWKALHHPFTSPAEGHEDLLETDPEKALSKAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG EI  G +R H  EV  + F  + I  +    +FG L  A Q G PPHGGIA G
Sbjct: 477 DMVLNGSEIGGGSVRIHRQEVQSKVFRALNIGADEANEKFGFLLEALQYGAPPHGGIAFG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DRIV ++ GA+++REV  FP +Q    LL  +PSTV  +QLREL +++
Sbjct: 537 LDRIVAMMAGAESIREVIAFPKTQRAQCLLTHAPSTVGEKQLRELHIKL 585


>gi|257867152|ref|ZP_05646805.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257873487|ref|ZP_05653140.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257801208|gb|EEV30138.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257807651|gb|EEV36473.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 591

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 238/593 (40%), Positives = 349/593 (58%), Gaps = 16/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG +  + +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+ +   +EIA
Sbjct: 4   RTVYCGLVNETHLNQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEVSKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+VL + G V++R+ E IN  ++TG  E+   +I IL+ A+     +  ++   +
Sbjct: 64  DKCRSEYVLEVTGQVINRAPEAINPKMVTGAYEVMISEITILNTAKTPAFLIEDDQTVGD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  +  NIV R +   ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRMKYRYLDLRRPKMTNNIVMRAKTTQAIRNFLDTNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRIYPGHFYALPQSPQIFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E +L  V  E   G  V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEELLAKVMREV-KGIEVTLPFPRMTYDEAMGRYGSDKPDTRFDMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E     +F+VF   +++  G  V  + AKG     +R   D +  +A   G  GLA++ 
Sbjct: 302 SEVVKDVDFKVFQ--MALEKGGVVKVLNAKGAADKYSRKDMDNLGHYAGQFGAKGLAWV- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
            +++E G     GP+AK L    T+AI    + + GD   F   D     S    A RN 
Sbjct: 359 -KVEEDGL---KGPIAKFLTEA-TDAIIAAANAEVGDILMF-GADSFAIVSATLGAIRNK 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +ELG+I+ + F F W+ D+P +E++EE  +   AH+PFT+P+     +   D   + A
Sbjct: 413 LGKELGLIDESKFNFLWVTDWPQFEYDEEAGRYVSAHHPFTLPKESDLPMLTTDPSKVYA 472

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H  EV  Q F  +G S+  ++N+FG L  A   G PPHGGI
Sbjct: 473 QAYDIVLNGYELGGGSLRIHTREVQEQMFEALGFSRREMQNQFGFLLDALDYGFPPHGGI 532

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VMLL G +N+REV  FP +    D +  +PSTVS  QL +L + + 
Sbjct: 533 ALGLDRLVMLLAGEENIREVIAFPKNGKAADPMSQAPSTVSPMQLFDLNIDVT 585


>gi|297623999|ref|YP_003705433.1| aspartyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165179|gb|ADI14890.1| aspartyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 610

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/590 (39%), Positives = 340/590 (57%), Gaps = 16/590 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           CG L  + VG  V L GWV+R R  GG++F D+RD  G+ QVV  P S  F  A+ +RSE
Sbjct: 16  CGTLREAHVGQDVTLKGWVNRRRDLGGLVFFDLRDRSGLVQVVVEPGSGAFGTAERLRSE 75

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYPESIR 125
           +V+ + G V +R     +  + TG +E+ A+ + +LS A+  P  V G     E  E +R
Sbjct: 76  FVVEVTGRVRARPEGQRSDRLQTGAVEVVARGVTVLSEAKTPPFLVDGSVDAGEVSEELR 135

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            KYR+LDLRR    + ++ R ++I ++   + AE F++  TP+LT S+PEGARDF+VPSR
Sbjct: 136 LKYRYLDLRRPEALRPLLVRHKVIKAIWDFLDAEGFVQVETPLLTLSTPEGARDFVVPSR 195

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              GSFYALPQ+PQ +KQLLM +G +RYFQIA CFRDED R+DR P +F QLD+EMSFV 
Sbjct: 196 TQPGSFYALPQSPQLFKQLLMMAGVERYFQIARCFRDEDLRADRQP-DFTQLDLEMSFVT 254

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           QD++L+  E ++R V +  + G  ++  F R+ Y+DA+ R+G+DKPD+R  + + +++E 
Sbjct: 255 QDELLDLNERLMRAVAKA-ALGIDLTLPFTRLTYEDAMNRFGSDKPDVRFALELQDLSET 313

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW---ARSQGQPGLAYIFWR 362
           F  ++FR F  +L    G  V A+P            R+ E    A++ G  G+A   W 
Sbjct: 314 FAETDFRGFRGVLEA--GGRVKALPLTAEHAAELSRKRLGELEAHAKTHGAKGMA---WL 368

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E    AG  P+AK L+   T  +      + GD    +A      C      R  +  
Sbjct: 369 RREGDGFAG--PIAKFLSAAETAELAAHAP-ETGDLLLIVADAWRVACEALGAVRARLGH 425

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I    + F W++DFP  E ++E     + H+PFT P+     L   D   ++A+ Y
Sbjct: 426 ELGLIPGGTYRFLWVVDFPLLERDDETGGYTYMHHPFTRPREEDLPLLETDPGRVRAWAY 485

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NGFE+  G +R +     L+ F+ +GIS+     RFG    A   G PPHGG+A G
Sbjct: 486 DLVLNGFEVGGGSLRIYDQATQLKMFAALGISEREARERFGFFVDALAYGAPPHGGVAWG 545

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR+VML  GA+++R+V  FP +Q   D L G+P+ +S  QL EL L + 
Sbjct: 546 LDRLVMLFAGAQSLRDVIAFPKNQRGGDPLTGAPAPLSAAQLAELSLSVT 595


>gi|56477896|ref|YP_159485.1| aspartyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|62287525|sp|Q5P280|SYD_AZOSE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56313939|emb|CAI08584.1| Aspartyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 599

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 238/606 (39%), Positives = 359/606 (59%), Gaps = 18/606 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG +  +D+   V L GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 2   RTHYCGQVTAADLDQTVTLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAETFHTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+V+ + G V  R A T N N+++G+IE+    +E+L+ +   P  +  +    E+
Sbjct: 62  SIRNEFVIELTGKVRRRPAGTENPNLVSGEIEVLCHTLEVLNASATPPFQL-DDDNLSEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R  +R +DLRR  + KN++ R ++  + R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTHRVIDLRRPQMQKNLMLRYKVAMAFRRFLDAQGFIDVETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ +I   ME+++R VF E +    + N F R+ + +A+RRYG+DKPDLR  + + +VT
Sbjct: 240 LDEAEITAIMEDMIRYVFRE-ALAVELPNPFPRMTHAEAMRRYGSDKPDLRVTLELTDVT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +      F+VFS       G  V A+   GG    R   D   ++    G  GLAYI   
Sbjct: 299 DAVQDVAFKVFSG--PATSGGRVAALRVPGGASLTRGEIDEYTKFVGIYGARGLAYIKVN 356

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                N  G+  P+ K+L+      I  R   + GD  FF A D  K  + A  A R  +
Sbjct: 357 DVTKPNDEGLQSPIVKNLHEEALRTILERTGAESGDLIFFGA-DKTKVVNDALGALRTKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESLKGNDLLS 476
             E G ++   +   W++DFP +E+++E K+    H+PFT P+      +ES  G  L  
Sbjct: 416 GHEKGYVSGAAWTPVWVVDFPMFEYDDESKRWVACHHPFTAPKDEHVELLESAPGECL-- 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YDL  NG+EI  G +R H +++  + F  + I  E  + +FG L  A + G PPH
Sbjct: 474 --AKAYDLALNGWEIGGGSVRIHRADMQSKVFRALNIGDEEAQLKFGFLLDALKYGAPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P  V  +QLREL +R+ +  +
Sbjct: 532 GGLAFGLDRVVTLMTGAESIRDVIAFPKTQRAQCLLTDAPGEVDDKQLRELHIRLRQKIE 591

Query: 597 KILKIS 602
             ++++
Sbjct: 592 TQVEVA 597


>gi|166154757|ref|YP_001654875.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155632|ref|YP_001653887.1| aspartyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301336031|ref|ZP_07224275.1| aspartyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|238687391|sp|B0B8B6|SYD_CHLT2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238687408|sp|B0B9Z5|SYD_CHLTB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|165930745|emb|CAP04242.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931620|emb|CAP07196.1| aspartyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 582

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/595 (40%), Positives = 348/595 (58%), Gaps = 20/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSAC 58
           +YRTH C +L +  VG  VRLSGWVHR R HGG++F+D+RD +GITQ+V     NP+   
Sbjct: 2   KYRTHKCNELSLDHVGEHVRLSGWVHRYRNHGGVVFIDLRDRFGITQIVCRQEENPE--L 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            ++   VRSEWVLC++GLV +R     N N++TG IE+    +E+LS A+ LP  +  E 
Sbjct: 60  HQLMDQVRSEWVLCVEGLVCARLEGMENPNLVTGSIEVEVSSLEVLSRAQNLPFSISDEH 119

Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R  YR+LD+RR  +   ++ R +++ + R  +  + F E  TPIL  S+PEGA
Sbjct: 120 INVNEELRLTYRYLDMRRGDILDRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGA 179

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSR+  G+FYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+
Sbjct: 180 RDYLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFTQI 238

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF   +D+   +E ++  +F     G  +   FLR+ Y +A   YGTDKPDLR  +
Sbjct: 239 DMEMSFGGPEDLFPVVEELVTRLFA--VKGIELKAPFLRMTYQEAKDSYGTDKPDLRFGL 296

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + N  E+     F +F   L+     + + +P  G   +R   D   ++ +  G  GL 
Sbjct: 297 RLKNCCEYARKFTFSIFLDQLAHGGTVKGFCVPG-GADMSRKQLDIYTDFVKRYGSMGLV 355

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-A 416
              W   + G V+    VAK  +    + +    + +D D    IA  P    + A D  
Sbjct: 356 ---WIKKQDGGVS--SNVAKFASEDVFQEMFEAFEAKDQDILLLIAA-PEAVANQALDHL 409

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  IA+E  + +   + F WI DFP +   +EE ++   H+PFT P     SL  +D  +
Sbjct: 410 RRLIAKERQLYDSTQYNFVWITDFPLF--AKEEGELCPEHHPFTAPLDEDISLLDSDPFA 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +++  YDLV NG+EIASG  R H  ++  + F+ + +S+E V+ +FG    A   G PPH
Sbjct: 468 VRSSSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFGFFIDALSFGTPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GIA G+DRI+M+L GA+ +REV  FP +Q   DL+M +PS +   QL+ELGL++
Sbjct: 528 LGIALGLDRIMMVLTGAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582


>gi|325290213|ref|YP_004266394.1| aspartyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965614|gb|ADY56393.1| aspartyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 598

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/593 (40%), Positives = 348/593 (58%), Gaps = 13/593 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--C 58
           M + RT + G L    +G  V+L GWV   R HGG+IF+D+RD  G+ QVV NPD A   
Sbjct: 1   MLKGRTEA-GLLTEEMIGQKVKLFGWVQTRRDHGGVIFVDLRDRSGVVQVVFNPDMANEG 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F  A+ +RSE+V+ ++GLV  R   + N ++ TG IE+   +  IL+ A+     +    
Sbjct: 60  FLSAERLRSEYVVELEGLVRQRPEGSENPSMTTGGIEVVVGEFAILNRAKTPAFYIQDNL 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  E++R KYR+LDLRR  L K ++ + +++  MR  +    F+E  TPIL  S+PEGAR
Sbjct: 120 EVDETVRLKYRYLDLRRPELQKVLMVKHKVMQIMRSFLDQNGFLEIETPILGRSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVNQG FY LPQ+PQ YKQLLM +G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 180 DYLVPSRVNQGCFYGLPQSPQIYKQLLMVAGVEKYFQIARCFRDEDLRADRQP-EFTQLD 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+E +DI+  ME ++  +F E + G  +     R+ Y +A+ RYG+DKPD R  + 
Sbjct: 239 MEMSFIEIEDIIPLMEQLIAKIFLEVT-GKEIPLPLPRLSYAEAMERYGSDKPDTRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357
           + +V +    S F+VF+   +V  G  V A+ AKG  G  R   D + ++    G  GLA
Sbjct: 298 LVDVAQVVRESGFKVFAD--TVAKGGRVMAVCAKGCSGMPRRELDDLTKFVSQYGAKGLA 355

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI   L E G  +   P+ K       + I   +  + GD  FF A           + R
Sbjct: 356 YIV--LAEEGMKS---PIIKFFTEEEIQRIIAAVGGETGDIIFFCADKEDIVFHALGNLR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ L +I  +     W+ +FP  E++EEEK+    H+ FT P      L   D L++
Sbjct: 411 IELAKRLRLIPGDAVNCLWVTEFPLLEYDEEEKRFAAKHHQFTAPMNEDRELLDTDPLNV 470

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           ++  YD+V NG E+  G IR H  ++  + F  +G+S+E    +FG L  AF+ G PPHG
Sbjct: 471 RSKAYDMVLNGMELGGGSIRIHQRDIQEKIFKLIGLSEEEAHEKFGYLLDAFEYGTPPHG 530

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+A G+DR++M+L G  N+R+V  FP +Q+   L+M +PS VS +QL+EL ++
Sbjct: 531 GLAFGLDRLIMILTGRDNIRDVIAFPKTQSASCLMMQAPSAVSGQQLKELHIK 583


>gi|121999005|ref|YP_001003792.1| aspartyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|121590410|gb|ABM62990.1| aspartyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 617

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 235/592 (39%), Positives = 352/592 (59%), Gaps = 11/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG++  S + + V L GWVHR R HGGIIF+D+RD  G+ QVV +PD+   F  A 
Sbjct: 25  RSHYCGEICESHLDTEVTLCGWVHRRRDHGGIIFIDLRDRAGLVQVVVDPDTEEAFAAAD 84

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             R+E+VL I G V  R   T N ++ +G++E+  + +E+L+ A+  P  +    +  E 
Sbjct: 85  RARNEYVLRITGRVRHRPEGTENPDLHSGRVEVLGRAVEVLNTAKTPPFQLDEHEQVGED 144

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R ++R++DLRR  + + +  R R+ +++R  +  E F++  TP+LT ++PEGARD+LVP
Sbjct: 145 VRLRHRYVDLRRPEMQQRLQLRARVSSAIRRHLEDEGFLDIETPMLTRATPEGARDYLVP 204

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF QLDME +F
Sbjct: 205 SRTHPGRFFALPQSPQLFKQLLMMAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDMEAAF 263

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+++ ++   E +LR +F +   G  +S+ F R+ Y +A+ RYG+DKPDLR P+ +  V 
Sbjct: 264 VDEEAVMGVTERMLRQLFRQVL-GVELSDPFPRMRYAEAMDRYGSDKPDLRIPLELVEVG 322

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GGGG  R   D   ++    G  GLAYI   
Sbjct: 323 DLVREVDFKVFSAP-AQDPRGRVAALRVPGGGGLTRKQIDDYTDFVGRYGAKGLAYIKVN 381

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            D +  V G+  P+ K L       I  R   Q GD  FF A             R  I 
Sbjct: 382 -DPAQGVEGLQSPIVKFLTEEAVRGILERTGAQAGDVVFFGADRASVVNDALGALRVRIG 440

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP--QGGMESLKGNDLLSIKA 479
            ++G++  + +   W++DFP +E++E++ ++   H+PFT P  Q   E L+  D  ++ +
Sbjct: 441 HDMGLVE-DAWRPLWVVDFPMFEYDEKDGRLYSLHHPFTAPCVQDPAE-LQQQDAEALVS 498

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD V NG E+  G IR H  ++    F  +GI +E   ++FG L  A Q G PPHGGI
Sbjct: 499 RAYDCVLNGVELGGGSIRIHDPDMQQAVFGVLGIGEEEARSKFGFLLDALQYGCPPHGGI 558

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VML+ GA ++REV  FP +Q    +L  +P+ V   QLRELG+R+
Sbjct: 559 AFGMDRLVMLMAGADSIREVMAFPKTQTATCMLTEAPAEVGEAQLRELGIRL 610


>gi|57242599|ref|ZP_00370536.1| aspartyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57016528|gb|EAL53312.1| aspartyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 583

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/596 (39%), Positives = 345/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H   DL  +++G  VRL GWV+  R HGG+IF+D+RD  G+ Q+V +P+ +    +IA
Sbjct: 2   RSHYNTDLNKANIGEEVRLCGWVNSYRDHGGVIFIDLRDRSGLIQLVCDPNDSQKAHKIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+VL   G V  R    INA + TG+IE+   ++ I+     +P    G+    E
Sbjct: 62  SSVRNEFVLIAHGKVRPRGEGLINAKLKTGEIEVVVSEL-IVENESMVPPFAIGDESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRNPRLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM + FDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCANFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++   E  L+ +F   + G  +   F ++ Y +A+  YG+DKPDLR  + + +V
Sbjct: 240 FCEQKDVMAVAETFLKDIFA--ACGKQIRTPFRQMSYKEAMENYGSDKPDLRFDLKLIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        + A+    G    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFAKSNNEIFTNIAKDPYKNRIKALKVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K     + + +  R  ++ GD  FF AG       +    R  +
Sbjct: 358 AKED-----GLKGPLCKFFGEEDLKELEKRCKLEVGDVVFFGAGVKKVVLDYMGRFRLFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +++ N  EF W++DFP +E N ++      H+PFTMP+    ++   +L  I + 
Sbjct: 413 AEELKLLDSNALEFLWVVDFPMFEKN-DDGSYSAMHHPFTMPK----NIDEENLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +E+  + F  + I++E    +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNEIQQKVFKLLNINEEEQREKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+  A ++REV  FP +Q    L+  +PS  S E +RELGL++ E+ K
Sbjct: 528 IGLDRLIMLVSKASSIREVIAFPKTQRAQCLMTEAPSEASKEAMRELGLKLRESVK 583


>gi|32475271|ref|NP_868265.1| aspartyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|46577189|sp|Q7UFY6|SYD_RHOBA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|32445812|emb|CAD78543.1| Aspartyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 592

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/595 (40%), Positives = 345/595 (57%), Gaps = 16/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61
           RTH+CG L  SDVGS V L GWV   R HGG +F+D+RD YG+TQVV  P   + A  + 
Sbjct: 3   RTHTCGALRKSDVGSPVTLCGWVDSKRDHGGAVFIDLRDRYGLTQVVIGPPEANEALIKQ 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  V +E V+ I G+V  R     NA + TG+IE+ ++  EILS +E  P    G+ + P
Sbjct: 63  AGHVPNESVILIRGVVADRLEGKTNAKLETGEIEVRSEHFEILSASETPPF-TPGQSDLP 121

Query: 122 -ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR  + + +++R+ II  MR      +FI+  TPIL  S+PEGARD+
Sbjct: 122 GEDLRLKYRFLDLRRKEMQQALIRRSEIIKCMRDYFAEHDFIDVETPILGRSTPEGARDY 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+  +FYALPQ+PQ YKQ+LM +GFDRY Q+A CFRDED R+DR P EF QLD+E
Sbjct: 182 LVPSRVHPSNFYALPQSPQLYKQILMVAGFDRYVQVAKCFRDEDLRADRQP-EFTQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+ +DI+  ++ ++    ++   G  ++    R+ Y++A+RR+G+D PDLR  + + 
Sbjct: 241 MSFVDSEDIIGLIDGLVAKTAKQVL-GKDITLPLPRMTYEEAMRRFGSDAPDLRFGLEIV 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQ-GQPGLA 357
           +VT     ++FRVF    + + G  V  I  K      +R   D +  + +   G  GLA
Sbjct: 300 DVTSVAAKTDFRVFRG--TADAGNFVRGINVKDSALKFSRRQIDELTAFVQQDFGAKGLA 357

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +  +R+++ G +    P+AK+ +  +   I+  +  + GD   F+A      C   +  R
Sbjct: 358 W--FRVEDDGTL--WSPIAKNFDEEHLAEIKALMGGEPGDLLMFLADTWEVTCKGLSGLR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A EL +         W+ +FP +E +EE  +    H+PFT P      L        
Sbjct: 414 KRLAVELKLYEDGELNCSWVTEFPMFEKDEEAGRYVAMHHPFTAPLEEDLPLLKESPEKC 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG E   G IR H S+V  Q F  +G+ +E   +RFG L  A + G PPHG
Sbjct: 474 RAQAYDLVINGSEAGGGTIRIHDSKVQSQVFELLGMDEETARDRFGFLLDALRFGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIA G+DR VML  G +N+REV  FP +Q   D++ G+P  V  +QL EL LR V
Sbjct: 534 GIALGVDRWVMLFAGLENIREVIAFPKTQKAADMMTGAPGEVDADQLNELHLRTV 588


>gi|329893677|ref|ZP_08269811.1| Aspartyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328923604|gb|EGG30916.1| Aspartyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 592

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/592 (39%), Positives = 345/592 (58%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L    +   V L GWV R R HGG+IFLD+RD  GI QVV +PD+   F +A 
Sbjct: 2   RSHLCGVLRSEHIDQTVTLCGWVDRRRDHGGVIFLDVRDRAGIVQVVFDPDTVEAFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL I G V +R+  TIN N+ TGQIE+  +++ IL+ AE  P  +       E 
Sbjct: 62  RVRSEYVLKITGRVRARTDATINPNMATGQIEVLGKELVILNQAETPPFQLDEHTSVSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R  YR++DLRR  + + +V R++I +++R  +  + F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLHYRYMDLRRTEMQQKLVLRSKITSAVRASLEDQGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHPGQFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIEASF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI+   E ++R +F    N +    +F R+ Y DA+ R+G+DKPDLR P  + +V 
Sbjct: 241 IDESDIMGITETMIRELFSSVLNVDL--GDFPRMTYADAMERFGSDKPDLRIPYELVSVD 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF +  + +P   V A+   GG   +R   D   ++    G  GLA++   
Sbjct: 299 DLMQQVDFKVF-RAPADDPEGRVAALKIDGGAQLSRKAIDDYTDFVGIYGAKGLAWVKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K +      ++  R+D +DGD  FF AG            R  +  
Sbjct: 358 QLAEGVSGLQSPILKFMPDEIVMSLMERIDAKDGDIVFFGAGKRQMVEESMGALRIKVGH 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ++G +    +   W++DFP +E    +      H+PFT P    E L+ N   ++ +  Y
Sbjct: 418 DMGAVAAR-WAPLWVVDFPMFE-KAGDGSWTALHHPFTSPSCTPEELEANPGQAL-SRAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H   +    F  +GI  E  E +FG L +A + G PPHGG+A G
Sbjct: 475 DMVLNGTELGGGSIRIHDQAMQRAVFRVLGIEAEEAEEKFGFLLQALKFGAPPHGGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+VML+ GA+++R+V  FP +Q+   ++  +P TV  + LREL +R+ E 
Sbjct: 535 LDRLVMLMTGAQSIRDVIAFPKTQSAACVMTDAPGTVDAKALRELNIRLREQ 586


>gi|166031158|ref|ZP_02233987.1| hypothetical protein DORFOR_00844 [Dorea formicigenerans ATCC
           27755]
 gi|166029005|gb|EDR47762.1| hypothetical protein DORFOR_00844 [Dorea formicigenerans ATCC
           27755]
          Length = 596

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/592 (40%), Positives = 353/592 (59%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH CG+L  ++VG    + GWV + R  GG++F+D+RD  GI QVV    + D+A  E 
Sbjct: 10  RTHRCGELSAANVGETATIMGWVQKNRNKGGLVFVDVRDRSGIIQVVFDEGSVDAALIEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+V+ + G V  RS   +N NI TG+IE+  +++ +LS +E  P  +    +  
Sbjct: 70  AAKLRSEYVVAVVGKVAKRSG-AVNENIATGEIEIIPEELRVLSESETPPFQIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  + +N++ R+++    R  M  E F+E  TP+L  S+PEGARD+L
Sbjct: 129 EEVRLKYRYLDLRRPDMQRNLMMRSKVATLARQFMANEGFLEIETPVLIGSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHQGHFYALPQSPQLFKQLLMCSGYDRYFQIAKCFRDEDLRADRQP-EFTQMDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E  L  +F+E   G  V     R+ + +A+ RYG+DKPD R  + + N
Sbjct: 248 SFVDVDDVIDVNERFLAMLFKEVL-GVEVPLPIPRMTWQEAMDRYGSDKPDTRFGMELVN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           VT+    SEF VF    ++  G  V  I AKG GG  R   D++ ++A+  G  GLAYI 
Sbjct: 307 VTDVVKDSEFVVFKG--AIENGGTVRGINAKGQGGMARKKIDKLVDYAKDYGAKGLAYI- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G V      AK +     + +   +D ++GD   F A             R  +
Sbjct: 364 -AIHEDGTVK--SSFAKFMTEDEQKNLIQAMDGENGDLLLFAADKNKVVWDVLGALRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++ +++ N ++F WI +FP  EW+EE+ +    H+PFTMP         +D   ++A 
Sbjct: 421 ARQMDLLDKNEYKFMWITEFPLLEWSEEQNRFTAMHHPFTMPMEEDLQYIDSDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+  NG EI  G +R    E+  + F  +G + E  + +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDITLNGNEIGGGSVRIFNPEIQSKMFEVLGFTPEQAQEQFGFLLTAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VML+    ++R+V  FP  ++  DL+  +P+ V  +QL ELGL +V
Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASDLMTEAPTKVDQKQLDELGLEVV 592


>gi|291561454|emb|CBL40253.1| aspartyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 598

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/594 (39%), Positives = 350/594 (58%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           R+  C ++  ++VG  + L GWV + R  GGIIF D+RD  GI Q++   ++  +  F  
Sbjct: 10  RSCRCAEVTEANVGQKMTLMGWVQKSRNKGGIIFTDLRDRSGIIQIIFEESDCGAESFAK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+ + + G +  RS    N N+ TG IE+ A+ + ILS +E  P P+    +  
Sbjct: 70  AEKLRSEFTVAVVGTIEKRSG-AANPNLKTGTIEMRAKSLRILSESEVPPFPIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L +NI+ R+R+   +R  +  E F+E  TP L  S+PEGARD+L
Sbjct: 129 EDLRLKYRYLDLRRPDLQRNIMIRSRVATMVRQFLADEGFLEIETPTLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ  KQLLM SG DRYFQ+A C+RDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGEFYALPQSPQLLKQLLMCSGMDRYFQLARCYRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ +D+L   E +L+ +F+E  N + V    LR+ + +A+ R+G+DKPD+R  + + N
Sbjct: 248 SFVDVEDVLEVNERLLKKLFKEICNFD-VQTPILRMTWREAMDRFGSDKPDMRFGMELKN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V++     EF VF   L    G  V  I A G  G  R   D + E+A+  G  GLAY+ 
Sbjct: 307 VSDVVKDCEFVVFKSAL--ENGGSVRGINADGQAGMPRKKIDALVEYAKGFGAKGLAYLA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D S   +      K +     +A+   ++ + GD  FF A           + R  I
Sbjct: 365 IHEDGSYKCS----FGKFMKQEELDALVKAMNGKPGDLLFFAADKNKVVFDVLGNLRLEI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L ++  + F+F W+ +FP  E++EEE +    H+PFTMP      L   D  +++A 
Sbjct: 421 ARQLDLLKKDDFKFLWVTEFPLLEYSEEEGRYVAMHHPFTMPMEEDLPLIDTDPGAVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H  ++  + F  +G +KE    +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKERAREQFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+VML++GA ++R+V  FP  ++   L+M +P+ V  +QL +L + IVE 
Sbjct: 541 YGLDRVVMLMVGADSIRDVIAFPKVKDASCLMMEAPAPVDPKQLEDLDIAIVEK 594


>gi|325568593|ref|ZP_08144886.1| aspartate--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325157631|gb|EGC69787.1| aspartate--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 591

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/593 (40%), Positives = 349/593 (58%), Gaps = 16/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG +  + +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+ +   +EIA
Sbjct: 4   RTVYCGLVNETHLNQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEVSKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+VL + G V++R+ E IN  ++TG  E+   +I IL+ A+     +  ++   +
Sbjct: 64  DKCRSEYVLEVTGQVINRAPEAINPKMVTGAYEVMISEITILNTAKTPAFLIEDDQTVGD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  +  NIV R +   ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRMKYRYLDLRRPKMTNNIVMRAKTTQAIRNFLDTNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRIYPGHFYALPQSPQIFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E +L  V  E   G  V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEELLAKVMREV-KGIEVTLPFPRMTYDEAMGRYGSDKPDTRFDMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E     +F+VF   +++  G  V  + AKG     +R   D +  +A   G  GLA++ 
Sbjct: 302 SEVVKDVDFKVFQ--MALEKGAVVKVLNAKGAADKYSRKDMDNLGHYAGQFGAKGLAWV- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
            +++E G     GP+AK L    T+AI    + + GD   F   D  +  S    A RN 
Sbjct: 359 -KVEEDGL---KGPIAKFLTEA-TDAIIAAANAEVGDILMF-GADSFEIVSATLGAIRNK 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +ELG+I+ + F F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A
Sbjct: 413 LGKELGLIDESKFNFLWVTDWPQFEYDEEAGRYVSAHHPFTLPKESDLPLLTTDPSKVYA 472

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H  EV  Q F  +G S   ++N+FG L  A   G PPHGGI
Sbjct: 473 QAYDIVLNGYELGGGSLRIHTREVQEQMFEALGFSCREMQNQFGFLLDALDYGFPPHGGI 532

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VMLL G +N+REV  FP +    D +  +PSTVS  QL +L + + 
Sbjct: 533 ALGLDRLVMLLAGEENIREVIAFPKNGKAADPMSQAPSTVSPMQLFDLSIDVT 585


>gi|317128224|ref|YP_004094506.1| aspartyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315473172|gb|ADU29775.1| aspartyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 596

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/601 (39%), Positives = 361/601 (60%), Gaps = 16/601 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFE 60
           + RTH CG++  S++G  V L GWV + R  G +IF+D+RD  G  Q+V N ++     +
Sbjct: 2   KKRTHLCGEVLESNIGEKVCLQGWVKKRRDLGQVIFVDLRDRSGHVQIVFNGENNKDALQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + VR+E+V+ + G V++R  ETIN  I TG+IE+   +IEIL+ ++ LP  +  + E 
Sbjct: 62  IGEKVRNEYVIEVCGTVVAREEETINDKIATGKIEVIVDEIEILNASKGLPFMIEDDVEI 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + + +  R R    +R  +    F+E  TP+LT S+PEGARD+
Sbjct: 122 SEDVRLKYRYLDLRRPKMFETMQLRNRTTKLIRDFLDENTFMEIETPMLTKSTPEGARDY 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGF+RY+Q+A CFRDED R+DR P EF Q+D+E
Sbjct: 182 LVPSRVHPGEFYALPQSPQLFKQLLMVSGFERYYQVARCFRDEDLRADRQP-EFTQIDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ ++++L  ME ++  + +E   G TV+  F R+ + +A+ R+G+DKPD R  + + 
Sbjct: 241 ASFLGKEELLAMMEQLMAKLLKEL-KGITVTTPFQRLTHSEAMNRFGSDKPDTRFGMELI 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V++    S+F VF+   +V  G  V  I  KG     +R   D +  +    G  GLA+
Sbjct: 300 DVSKAVEDSDFGVFAN--TVKKGGVVKGICVKGIADQYSRKDLDNLTSFVSVYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
           +  +++E+  +   GP+AK  N      +    D  +GD   F+A D  K    A  A R
Sbjct: 358 L--KVEENNTLK--GPIAKFFNETEAATLCDAFDATNGDVLLFVA-DKQKVAWDALGALR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLS 476
              A+E  +I+ + F F W+ DFP   ++E+EK+    H+PFT P    +E L       
Sbjct: 413 LKFAKEHSLIDESKFNFLWVTDFPLLSYDEDEKRYVAEHHPFTRPINEDVEKLVTAP-EE 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YDLV NG+E+  G  R +  E+  Q FS +G ++E  +++FG L  AF+ G PPH
Sbjct: 472 VRAEAYDLVLNGYELGGGSQRIYERELQEQMFSALGFTEEEAKSQFGFLLEAFEYGTPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA G+DR+VM+L G  N+RE   FP + +   LL  +PS+VS  QL EL L +VE  +
Sbjct: 532 GGIALGLDRLVMILAGRSNLRETIAFPKTASASCLLTNAPSSVSDAQLDELHLNVVEKKE 591

Query: 597 K 597
           +
Sbjct: 592 E 592


>gi|307545148|ref|YP_003897627.1| aspartyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307217172|emb|CBV42442.1| aspartyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 593

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/595 (40%), Positives = 357/595 (60%), Gaps = 12/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  + V   V L GWVHR R HGG+IFLD+RD  GI QVV +PD+A  F  A 
Sbjct: 2   RSHYCGQLNETMVDQTVTLCGWVHRRRDHGGVIFLDMRDRDGIAQVVVDPDTAEAFANAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             R+E+VL I G +  R   T N N+ TG IE+ A+ +E+L+ A   P  +    +  E 
Sbjct: 62  RARNEYVLRIVGRIRLRPEGTQNPNMPTGMIEVLAKDVEVLNTAATPPFQLDEHGKVGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR K+R++DLRR  +   +  R+RI +++R  +  + F++  TPILT ++PEGARD+LVP
Sbjct: 122 IRLKHRYIDLRRPEMIDKLRLRSRISHTVRAYLENQGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHAGSFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIEASF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+DDI+   E ++R +F+E  +       F R+ Y +A++R+G+DKPDLR P+ + +V 
Sbjct: 241 VEEDDIMAITEGMIRQLFQEVLDVEL--PEFPRMPYAEAMQRFGSDKPDLRIPLELVDVD 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + + G  V A+  KGG   +R   D    +    G  GLA+I   
Sbjct: 299 DLMKDVDFKVFSGPANADDG-RVAALKVKGGASLSRKEIDDYTNFVGIYGARGLAWIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              SG      P+ K ++ V  E +  R+  +DGD  FF A D  +  + A  A R  + 
Sbjct: 358 DRASGIEGLQSPIVKFMDGV-IEPLLDRVGAEDGDIIFFGA-DKARIVNEALGALRVRLG 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +     +   W++DFP +E  ++  ++   H+PFT P   +E+LK     ++ +  
Sbjct: 416 EDLDLYTAE-WSPLWVVDFPMFE-EDDNGRLQALHHPFTAPSCDVETLKQRPAEAL-SRA 472

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H   +     +++GI +E    +FG L  A Q G PPHGG+A 
Sbjct: 473 YDMVLNGTELGGGSIRIHDQTMQQAVLASLGIGEEEAREKFGFLLDALQYGAPPHGGLAF 532

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML+ GA+ +REV  FP +Q+   L+  +P  VS +QL+EL +R+ +  K
Sbjct: 533 GLDRLVMLMGGARTIREVIAFPKTQSAACLMTDAPGEVSGQQLKELNIRLRQKAK 587


>gi|328950736|ref|YP_004368071.1| aspartyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451060|gb|AEB11961.1| aspartyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 586

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/601 (39%), Positives = 346/601 (57%), Gaps = 28/601 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH CG+L  + VG  V L GWV+R R  GG+IF+D+RD  G+ QVV  P+S  F  A  
Sbjct: 3   RTHYCGELTRAHVGERVTLEGWVNRRRDLGGLIFVDLRDRAGLVQVVVPPESPAFAEADR 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----FGEREY 120
           VR E+V+ + G V  R A+ +N  + TG++E+ A+ + +L+ A+  P  V     GE + 
Sbjct: 63  VRGEYVVRVSGTVRERPADQVNPRLATGEVEVLAEAVTVLAEAKTPPFAVDAGWRGEADP 122

Query: 121 P----ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                E +R KYR+LDLRR  +   +  R R+I ++   +  E FI+  TP LT S+PEG
Sbjct: 123 TDRVNEDLRLKYRYLDLRRKGMQDKLRLRHRVIKAIWDFLDREEFIQVETPFLTRSTPEG 182

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDFLVPSR+  G FYALPQ+PQ +KQ+LM +G DRYFQIA CFRDED R+DR P +F Q
Sbjct: 183 ARDFLVPSRLEPGRFYALPQSPQLFKQMLMIAGVDRYFQIARCFRDEDLRADRQP-DFTQ 241

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+EMSFV+ +D+L   E ++  VF E + G  V   F R+ Y +A+ RYG+DKP++   
Sbjct: 242 LDLEMSFVDVEDVLELNERLVAHVFRE-ALGVEVPTPFPRLAYREAMNRYGSDKPEIGFG 300

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           + + + TE F  SEFR F  ++      +    P +    +R     + E A+  G  GL
Sbjct: 301 LELVDATEAFRASEFRAFRSVVEAGGVVKALVCPRE---LSRKEVAALEEEAKRHGAKGL 357

Query: 357 AYIFWRLDESGNVAGMGPVAKHL--NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           A+   ++   G   G   +AK L  ++  T      L  + G +  F+A           
Sbjct: 358 AWA--KVTPEGPAGG---IAKFLPADLAQT------LGAEPGATLLFVADCWETAVKALG 406

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGND 473
             R  + + LG+I    F F W++DFP  EW+EE  +  + H+PFT P +  +E L+  D
Sbjct: 407 AVRLELGRRLGLIPEEGFRFLWVVDFPLLEWDEEAGRWTYMHHPFTSPVEADLEYLE-TD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              ++A  YDLV NG E+  G IR H  +V  + F  +GI +     +FG    A + G 
Sbjct: 466 PGRVRAKAYDLVLNGTEVGGGSIRIHRVDVQRRMFQALGIGEAEAREKFGFFLEALEYGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR++ L+ GA ++REV  FP +Q+  D L  +P+ V+ EQL ELG+R+VE
Sbjct: 526 PPHGGIAWGLDRMLALMAGAASIREVIPFPKNQSGRDPLTDAPAVVAPEQLAELGIRVVE 585

Query: 594 N 594
            
Sbjct: 586 E 586


>gi|325997490|gb|ADZ49698.1| Aspartyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 577

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/589 (38%), Positives = 344/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW    R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKIIKVAGWWKTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R A   N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKHVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+    G+T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQAIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E       GP+ K L+    ++I  + D+Q GD  FF AGD      +    R  +A+
Sbjct: 358 ENEV-----KGPLVKFLSEKGLKSILEKTDVQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|299535680|ref|ZP_07049001.1| aspartyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298728880|gb|EFI69434.1| aspartyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 589

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/590 (39%), Positives = 355/590 (60%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH+  +L  +  G  V L GWV R R  GG+IF+D+RD  GITQVV +PD A    +A 
Sbjct: 4   RTHASNELSEALQGEKVVLKGWVQRRRDLGGLIFIDLRDRTGITQVVFSPDVAEAHALAD 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ ++G V+ R+ + IN N+  G+IE+ A K+ +++ A+  P  +    +  E 
Sbjct: 64  KVRSEYVIEVEGTVILRTEDQINPNVPNGKIEVEATKLVVINTAKTTPFQIEDRTDVSED 123

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  +      R+ +  ++R  +  E F+E  TPILT S+PEGARD+LVP
Sbjct: 124 LRLKYRYLDLRRPVMFDTFKMRSDVTRTIRNFLQNEGFLEVETPILTKSTPEGARDYLVP 183

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM +GF++YFQIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 184 SRVHEGEFYALPQSPQLFKQLLMVAGFEKYFQIARCFRDEDLRADRQP-EFTQVDIETSF 242

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + Q+++L   E +++ V +E   G  +   F R+ Y +A+ RYG+DKPD+R  + +  + 
Sbjct: 243 LTQEEVLEMNERLIQAVMKEV-KGIDIPAPFQRMKYQEAMDRYGSDKPDVRFGLELVALN 301

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361
           + F    F+VF+   +V  G +V +I  KG     +R   D + ++    G  GLA++  
Sbjct: 302 DIFEGCNFKVFAD--TVAQGKQVKSINIKGAADKYSRKDMDELTKFVGIYGAKGLAWL-- 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++ E G     GP+AK  +     A+  R+  + GD   F+A       +     R  + 
Sbjct: 358 KVTEEGL---NGPIAKFFDEALAAALIERMGAEVGDILVFVADKAAVVAASLGALRTKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           Q+L +I+ + F F WI D+P +E++EE+ +   AH+PFT P     +L   D  +++A  
Sbjct: 415 QDLNLIDESQFAFLWITDWPLFEYSEEDGRYYAAHHPFTRPFDEDIALMDTDPAAVRAQA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  ++  + F  +G S+E  + +FG L  AF+ G+PPH G+A 
Sbjct: 475 YDIVLNGYELGGGSLRIYERDLQEKMFELLGFSEEEAQAQFGFLLEAFEYGVPPHAGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR VMLL G  N+R+   FP + +   L+  +PS VS EQL EL L I
Sbjct: 535 GLDRFVMLLAGRTNLRDTIAFPKTASASCLMTEAPSEVSPEQLSELSLAI 584


>gi|312623086|ref|YP_004024699.1| aspartyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203553|gb|ADQ46880.1| aspartyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 594

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/591 (39%), Positives = 343/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  C ++ + DVG  V L+GWV   R  GGIIF+D+RD  GI QVV +        + A
Sbjct: 9   RTKYCAEVSLDDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+RSE+ + + G+V  R  ET+N  I TG+IE+ A ++ I + +E  P P+       E
Sbjct: 69  DSLRSEYCIGVRGIVEKRPPETVNPKIKTGEIEVRATELRIFNKSETPPFPIEEGINVNE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + +N++ R ++   +R  +    FIE  TP+LT S+PEGARD+LV
Sbjct: 129 AVRLKYRYLDLRRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQ +KQLLM +GFDRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 189 PSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ DD++   E +L+ +F E   G  +     R+ Y +A+ R+G+DKPD R  + + ++
Sbjct: 248 FVDVDDVIEINEKLLQTIFREML-GIDLKLPLPRLTYKEAMERFGSDKPDTRFGMELVDI 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           T+   + EF+VF+   + N G  V AI AKG     +R   D + E+A++    GLA+I 
Sbjct: 307 TDIVKNCEFKVFAD--AANKGGSVRAINAKGCAATFSRREIDALVEFAKNFKAKGLAWIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D         P+ K L       I  RL  + GD   F A           + R  I
Sbjct: 365 VESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKNEIVFDVLGNLRLEI 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +++ + F   W+ +FP +E++EEE +    H+PFT P          D   +++ 
Sbjct: 420 ARKLNLLDKSKFNLLWVTEFPLFEYSEEEGRFVAKHHPFTSPMDEDLEFLETDPTKVRSK 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H  E+  + F  +G ++E  ++RFG L  AF+ G PPHGGIA
Sbjct: 480 AYDIVLNGTEIGGGSIRIHSPELQKRMFKALGFTEERAQDRFGFLLEAFKYGTPPHGGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G DR+ MLLLG  ++R+   FP  ++    L  +PS V  +QLREL +++
Sbjct: 540 YGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590


>gi|326329820|ref|ZP_08196140.1| aspartate--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325952406|gb|EGD44426.1| aspartate--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 594

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/596 (40%), Positives = 342/596 (57%), Gaps = 31/596 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    VG  V L+GWV R R HGG+ FLD+R+  G+ QVV   +    EIA +
Sbjct: 3   RTHDAGTLRAEHVGQTVTLAGWVGRRRDHGGVAFLDLREASGVVQVVVRDE----EIAHA 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V++R+ E  N N+ TG+IE+ A+ +E+LS A  LP P+    E  E +
Sbjct: 59  LRNEYCIKVTGEVVARTEENRNPNLATGEIEVVAKDLEVLSAAAPLPFPIDDHVEVGEDV 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R+K+R+LDLRR      I  R++   + R  + A +F+E  TP LT S+PEGARDFLVP+
Sbjct: 119 RYKHRYLDLRRTAPGNAIRLRSKANKAARDVLAAHDFVEIETPTLTRSTPEGARDFLVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+Q+A  +RDED R+DR P EF QLD+EMSFV
Sbjct: 179 RLQPGSWYALPQSPQLFKQLLMVGGMERYYQLARAYRDEDFRADRQP-EFTQLDIEMSFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E ++  +++    G  V     R+ Y DA+ +YG+DKPDLR  I +   T+
Sbjct: 238 EQDDVIALGEEIVAALWKLI--GYDVPLPLPRMTYADAMAKYGSDKPDLRFGIEITECTD 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+   GG    R   D   +WA+ +G  GLAY+   +
Sbjct: 296 YFSETTFRVFQAPY-------VGAVVMPGGASQPRRQLDGWQDWAKQRGAKGLAYVL--V 346

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G++   GPVAK+L+      +   +    GD  FF AG P    S    AR  I   
Sbjct: 347 QEDGSL--TGPVAKNLSETEAAGLAAHVGANPGDCIFFAAGAPKSSRSLLGAARLEIGNR 404

Query: 424 LGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLKGND 473
           L +     + F W++D P  E  +E  +  D A         H+ FT PQ  +ES   + 
Sbjct: 405 LDLRKDGEWSFLWVVDAPLLEPASEAVESGDVAVGAGEWTAVHHAFTSPQ-DVESFDKDP 463

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +I A+ YD+VCNG EI  G IR H  +V  + F  +GI +E  E +FG L  AF+ G 
Sbjct: 464 GNAI-AWAYDIVCNGNEIGGGSIRIHREDVQKRVFDLMGIGEEAAEEKFGFLLEAFKFGA 522

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGGIA G DR+V LL G  ++R+V  FP +    D L  +P+ ++ EQ +E G+
Sbjct: 523 PPHGGIAFGWDRVVALLAGTDSIRDVIAFPKTGAGYDPLTAAPAPITPEQRKEAGV 578


>gi|108563023|ref|YP_627339.1| aspartyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123246989|sp|Q1CTQ7|SYD_HELPH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|107836796|gb|ABF84665.1| aspartyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 577

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/589 (38%), Positives = 348/589 (59%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G V  R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGRVRLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+  + G+T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQAIFK--AVGHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F  S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFRDSSNAIFSNIAKDPKNKRIKALNVKGADAVFSRSVLKELEEFVRQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  +   Q GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAQTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+    +++  D+  ++A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECEDIEEVEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSHSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|169335837|ref|ZP_02863030.1| hypothetical protein ANASTE_02263 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258575|gb|EDS72541.1| hypothetical protein ANASTE_02263 [Anaerofustis stercorihominis DSM
           17244]
          Length = 585

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/593 (39%), Positives = 355/593 (59%), Gaps = 20/593 (3%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVR 66
           C ++   D+G  V LSGWV R R  GG+IF+ +RD  GI Q+VAN +     FE A+++R
Sbjct: 2   CAEITKEDLGKKVTLSGWVQRRRDLGGVIFIHLRDRSGIMQLVANSELNKEVFETAENIR 61

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +E+VL + G V+ R  E  N NI TG++EL    +E+L  A   P+ +       E+ R 
Sbjct: 62  NEYVLKVSGEVVLRDEENFNPNIETGELELKLDTMEVLDSANTPPIYIDESDNANEATRL 121

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           +YRFLDLR+D +  N++ R +  + +R  + +E F+E  TP L   +PEGARDFLVPSR+
Sbjct: 122 EYRFLDLRKDKIKNNLITRAKTCSVVRNFLDSEGFLEIETPFLGKPTPEGARDFLVPSRI 181

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            +G F+ LPQ+PQ +KQ+LM SG DRY+QI  CFRDED R DR P EF Q+D+EMSFV+ 
Sbjct: 182 RKGKFFGLPQSPQLFKQILMVSGMDRYYQIVKCFRDEDLRQDRQP-EFTQIDLEMSFVDV 240

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           DD+++  E +++ VF+E  + + +    +R+ + +A+ R+G+DKPD R  + + ++++  
Sbjct: 241 DDVIDVNERLVKKVFKEIIDYD-IEAPIMRMEFSEAMDRFGSDKPDTRFGMELFDLSDLL 299

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLD 364
              +F VF+    +  G  V AI AKG     +R   D + ++ ++ G  GLA+I   ++
Sbjct: 300 KDCKFNVFAG--PIKNGGSVRAINAKGLADFFSRRDIDALVDYVKTYGAKGLAWI--AVN 355

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G++     + K L+   T+ I  R   ++GD  F +A           + R HIA++ 
Sbjct: 356 EDGSIKSQ--ITKFLSEEETKGILDRAKAENGDIVFIVADKNKVVYDSLGNLRLHIAKKA 413

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMESLKGNDLLSIKAF 480
            I     F F W+ +FP +E++E EK+    H+PFT P       +ES  G     ++A 
Sbjct: 414 EIKMDEGFNFLWVTNFPMFEYDENEKRYKAMHHPFTAPMDEDLDKLESEPG----EVRAK 469

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H  EV  + F+ +G S E  EN+FG L +A + G PPHGG+A
Sbjct: 470 AYDLVVNGVEMGGGSIRIHSGEVQQKVFNVLGFSDEEAENKFGFLLKALKYGTPPHGGLA 529

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR++MLL+  +N+R+V  FP +QN   L+  +PS VS EQL ELG+ +V+
Sbjct: 530 FGLDRMIMLLVDTENIRDVIAFPKTQNHTCLMSDAPSIVSEEQLEELGIEVVD 582


>gi|240173264|ref|ZP_04751922.1| aspartyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 591

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/602 (39%), Positives = 339/602 (56%), Gaps = 28/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H  G L   D G  V L+GWV R R HGG+IF+D+RD  G+ QVV   D      A  
Sbjct: 3   RSHGAGSLRDRDAGQHVTLAGWVARRRDHGGVIFIDLRDASGVAQVVFR-DPQVLAQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R     N  I TG +E++A  + +L   E  PLP   +    E +
Sbjct: 62  LRAEFCVTVCGVVELRPEGNANPEIATGDVEVNATALTVLG--ECAPLPFQLDEPAGEEL 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRRD     I  R+++  + R  +   +F+E  TP +T S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRRDGPASAIRLRSKVNAAARDVLARHDFVEIETPTITRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDME+SFV
Sbjct: 180 RLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMELSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +DI+   E +L  ++E    G  +S    RI Y DA+RR+G+DKPD+R  + +   TE
Sbjct: 239 DAEDIIAISEEILTALWELI--GYRISTPIPRISYADAMRRFGSDKPDMRFGVELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  + FRVF           V ++   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 297 FFKDTTFRVFQAPY-------VGSVVMPGGASQPRRTLDGWQEWAKQRGHRGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPVAK+L+    + +   +  + GD  FF AG P    +    AR+ IA  
Sbjct: 348 GEDGTLG--GPVAKNLSDSERDGLAAHVGAEPGDCIFFSAGPPKSSRALLGAARSEIAHR 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473
           L +++ + + F W++D P +E  +E     D A         H+ FT P+   E    +D
Sbjct: 406 LDLVDPDAWAFVWVVDPPLFEPADEATAAGDVAVGSGAWTAVHHAFTAPKPEFEDRIDSD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S+ A  YD+VCNG EI  G +R H  +V  + F+ +G+ K   E +FG L  AF  G 
Sbjct: 466 PGSVLADAYDIVCNGHEIGGGSVRIHRRDVQERVFAVMGLDKAEAEEKFGFLLEAFMFGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G DRI  LL GA ++REV  FP +    D L  +P+ ++ +Q +E G+    
Sbjct: 526 PPHGGIAFGWDRITALLAGADSIREVIAFPKTGGGVDPLTNAPAPITAQQRKESGIDAKP 585

Query: 594 NP 595
            P
Sbjct: 586 KP 587


>gi|254372109|ref|ZP_04987602.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151569840|gb|EDN35494.1| aspartyl-tRNA synthetase [Francisella novicida GA99-3549]
          Length = 592

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/590 (38%), Positives = 346/590 (58%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 4   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 64  LRSEFVIKAEGVVNLRPEGQENKNIASGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 123

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 124 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 183

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 184 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 242

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++ ME ++ G+F+E + G   +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 243 DEAFIMSAMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 301

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 302 DMQNEEFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 361 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 420

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E  +++ ++   H+PFT P+   +E L   +   + +  
Sbjct: 421 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS +    +FG +  A   G P HGGIA 
Sbjct: 478 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ +
Sbjct: 538 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 587


>gi|330836108|ref|YP_004410749.1| aspartyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748011|gb|AEC01367.1| aspartyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 618

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 245/591 (41%), Positives = 342/591 (57%), Gaps = 12/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT +CG L  +D G  V L+GWVHR R HG + F+++RD YGITQVV + D++      A
Sbjct: 30  RTVTCGQLTAADNGRKVVLNGWVHRDRNHGALHFINLRDRYGITQVVVDDDASPELSATA 89

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+R E+ + ++G+V  R    +N ++ TG++E+ A +I+ILS    LP  +  E +  E
Sbjct: 90  ASLRMEFCVAVEGIVRLRPDSMVNKDMHTGEVEVKAIRIDILSTCPALPFMIDEETDAKE 149

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R  YR+LDLR   + K I  R   + ++R  +   NF E  TP L  S+PEGARDFLV
Sbjct: 150 DTRLTYRYLDLRSGGMQKRIRLRHEFVKAIRQYLYTTNFYEIETPTLIKSTPEGARDFLV 209

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ  KQ+LM SGFDRYFQIA C+RDED R DR   EF QLDMEMS
Sbjct: 210 PSRLYPGKFYALPQSPQLLKQILMVSGFDRYFQIARCYRDEDARGDR-QLEFTQLDMEMS 268

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV +DD+L  +E +   VF++  N   +   F R+ Y D++  YG DKPDLR  + + ++
Sbjct: 269 FVTRDDVLELIEKLFGYVFDKVMN-YRLPVKFRRLTYHDSMNTYGNDKPDLRFDLPIVDI 327

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
                 + F  F+  L+     +   +PA+ G   +R F D + E A   G   L +I  
Sbjct: 328 GLLATKTNFDAFTGALAAGGVVKALRVPAQEGVSFSRKFIDGLAEAAAVYGARNLGWI-- 385

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADARNHI 420
           ++ + G     G V+K    +  E +   L+ + GD   FIA     K C+     R+ +
Sbjct: 386 KVGDDGTFT--GGVSKFFAGLEDE-LSASLEAKPGDLLLFIAHPQWKKACTSMGAIRSKL 442

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++LG+I    FEFCWI+DFP +E+NEE +  + AH+ F+MPQ    S   +D  S+K  
Sbjct: 443 GKDLGLIRPG-FEFCWIIDFPLFEFNEETEHWEAAHHMFSMPQTEYISTLESDPGSVKGD 501

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+ASG IR H  E+  + F     S E  E RFG L  AF+ G PPHGGIA
Sbjct: 502 LYDLVLNGYEVASGSIRIHDVELQKRIFRICNFSDEEAEKRFGFLLDAFRYGAPPHGGIA 561

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GIDR+VM++    +++EV  FP +      +  SPS V  +QL EL L I
Sbjct: 562 PGIDRMVMIMAEQTSIKEVIAFPKNTAAISPMDDSPSEVDGKQLDELHLII 612


>gi|291524449|emb|CBK90036.1| aspartyl-tRNA synthetase [Eubacterium rectale DSM 17629]
          Length = 598

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/593 (39%), Positives = 350/593 (59%), Gaps = 13/593 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60
           +R+H C ++  +++G  V + GWV + R  G +IF+D+RD  GI Q+V    N  +  FE
Sbjct: 9   HRSHRCTEVSNANIGEKVTVMGWVQKRRNLGSLIFVDLRDRSGILQIVFGEENVGAEGFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A ++RSE+V+ ++G V  R+A  +N N+ TG IE+ A  I +LS A+  P  +    + 
Sbjct: 69  KAGTLRSEFVIAVEGTVQKRTA-AVNENLKTGDIEVIATSIRVLSEAQTPPFHIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LDLRR  + +N++ R+ ++  MR  M  E F+E  TPIL  S+PEGARD+
Sbjct: 128 SEDIRLKYRYLDLRRPDIQRNLMLRSNVLRVMRDFMANEGFLEIETPILCKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQ+PQ +KQLLMASG+DRYFQIA CFRDED R+DR P EF Q DME
Sbjct: 188 LVPSRIHHGHFYALPQSPQLFKQLLMASGYDRYFQIARCFRDEDLRADRQP-EFTQADME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD++   E +L+ +F+E  N + V   F R+ + +A+ R+G+DKPD R  + + 
Sbjct: 247 LSFVDIDDVIEVNERLLKHLFKEVINVD-VEIPFKRMPWQEAMDRFGSDKPDTRFGMELC 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           +V++      F VF+  L    G  V  I  +G     R   D++ E A+  G  GLAY+
Sbjct: 306 DVSDVVKDCGFGVFTGALE--NGGSVRGINVEGQAKMPRKKIDKLVEHAKGCGAKGLAYL 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              ++E G        AK +     +A+  +++ + GD   F A       +     R  
Sbjct: 364 C--INEDGTYK--SSFAKFMTEAELDALVAKMNGKPGDLLLFAADKNKIVWNVLGALRLM 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  ELG+I+ N + F W+ +FP  EW++EE +    H+PFTMP         +D  +++A
Sbjct: 420 LGAELGLIDENKYNFLWVTEFPLLEWSDEENRFMAMHHPFTMPMEEDWDKIDSDPGAVRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G +R H  ++  + F  +G +KE    +FG L  AF  G+PPH G+
Sbjct: 480 KAYDIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKERAHEQFGFLLDAFSYGVPPHAGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DRI M +L   N++EV  FP  ++  DL+  +P TV  +QL ELG+ + 
Sbjct: 540 AFGVDRICMHMLHTDNIKEVIAFPKVKDASDLMSEAPGTVDPKQLEELGIAVA 592


>gi|258512004|ref|YP_003185438.1| aspartyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478730|gb|ACV59049.1| aspartyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 600

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 238/594 (40%), Positives = 349/594 (58%), Gaps = 14/594 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58
           R+RTH   D       S VRL+GWV R R  G ++F+D+RD  GI Q+V +         
Sbjct: 11  RWRTHWVADTVRVQPKSEVRLAGWVQRRRDLGSVVFVDLRDRTGIVQLVFDRARGTSDEA 70

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E+A  +RSE+V+ +DG V  R  +T+N  I TG+IE+      I S A+  P  +    
Sbjct: 71  MEVADRLRSEYVIVVDGTVEKRDPDTVNPKIETGEIEVVVTSARIESAAKTPPFYIEDGI 130

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E +R +YR+LDLRR  + +    R + I + R  +    F+E  TP+LT S+PEGAR
Sbjct: 131 QVEEPVRLRYRYLDLRRPEMQRIFALRHQAIRAFRRYLDDHGFLEIETPMLTKSTPEGAR 190

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR+  G FYALPQ+PQ +KQLLM +GF+RY+Q+A CFRDED R+DR P EF QLD
Sbjct: 191 DYLVPSRLQPGEFYALPQSPQIFKQLLMVAGFERYYQVARCFRDEDLRADRQP-EFTQLD 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +D++++ ME ++  VF+E ++   V   FLR+ Y +A+ +YG+DKPDLR  + 
Sbjct: 250 IETSFLPKDELMSMMEEMMASVFKEVADIE-VPRPFLRLPYQEAMDKYGSDKPDLRFGME 308

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357
           M ++ + F  + FRVF+ +L    G  + A+ A G    +R   D +  + +  G  GLA
Sbjct: 309 MADLADLFEGTSFRVFADVL--EKGGVIKALVAPGCASYSRKQTDDLVAFVKPYGLGGLA 366

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+   + E G  +    +AK     +   I  R   + GD     AG            R
Sbjct: 367 YV--AVQEDGFKSS---IAKFFTDDDFRRIADRAGAKVGDLVLIGAGPRETVLPAMGALR 421

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            H+ QELG+I+ + + F W+ DFP   W+EEEK+    H+PFTMP+     L   D   +
Sbjct: 422 LHLGQELGLIDESQYRFLWVTDFPLLSWDEEEKRWVAEHHPFTMPREEDIPLLDTDPGRV 481

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+EI  G +R +  +V  + F+ +G S E  + +FG L  AF+ G PPHG
Sbjct: 482 RAQAYDMVLNGYEIGGGSMRIYRRDVQEKMFAALGFSPEEAQEKFGFLLNAFEYGTPPHG 541

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DR++MLL GAK++R+V  FP + +  DL++G+PS VS  QL  L LR+
Sbjct: 542 GIAFGLDRMIMLLTGAKSLRDVIAFPKTASGTDLMVGAPSEVSEAQLEVLHLRV 595


>gi|291523618|emb|CBK81911.1| aspartyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 599

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/594 (39%), Positives = 354/594 (59%), Gaps = 15/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           RTH C +L  + VG  V + GWV + R  GG++F+D+RD  GI Q++   +   +  FE 
Sbjct: 10  RTHRCAELSKAQVGQTVTVMGWVQKSRNKGGVVFVDLRDRSGILQIIFEENKCGTEIFEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+V+ + G V  R+   +N N+ TG+IE+ A+++ ILS +E  P  +    +  
Sbjct: 70  AGKLRSEFVIAVTGQVCERAG-AVNKNLATGEIEVIAEQLRILSESETPPFHIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  + KNI+ R+R    +R  +  E F+E  TP+LT S+PEGARD+L
Sbjct: 129 EELRLKYRYLDLRRPDIQKNIMMRSRACAVIRNFLTEEGFLEIETPMLTKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQ+A CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGSFYALPQSPQLFKQLLMVSGYDRYFQLARCFRDEDLRADRQP-EFTQVDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L  +F+E   G  V     R+ + +A+ R+G+DKPD R  + +++
Sbjct: 248 SFVDVDDVIDVNERLLARLFKEII-GVDVPLPIQRMTWQEAMDRFGSDKPDTRFGMELND 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           VT+     EF VF    ++  G  V  I AKG G   R   D +  + +  G  GLAYI 
Sbjct: 307 VTDVVRDCEFAVFKN--AIADGGSVRGINAKGQGTMPRKKIDALVAFVKDYGAKGLAYIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            + D S   +     AK +     +A+   +  + GD   F A  + + + S  A  R  
Sbjct: 365 IQPDGSIKSS----FAKFMKDEEMQALIAAMQGEPGDLLLFAADKNKIVYASLGA-LRLE 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A ++G+++ N + F W+ +FP  EW++EE +    H+PFTMP          D   ++A
Sbjct: 420 LADKMGLLDKNQYNFLWVTEFPLLEWSDEENRFQAMHHPFTMPMEEDLQYIDTDPGRVRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G +R H  ++  + F  +G +KE    +FG L  AF+ G+PPH G+
Sbjct: 480 KAYDIVLNGTEIGGGSVRIHQDDIQEKMFEALGFTKERAHEQFGFLLDAFKYGVPPHAGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DR++ML+    ++R+V  FP  ++   LL  +P TV  +QL ELG+R+ E
Sbjct: 540 AYGLDRLIMLMAKVDSIRDVIAFPKVKDASCLLTNAPDTVDEKQLEELGIRVNE 593


>gi|257068573|ref|YP_003154828.1| aspartyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256559391|gb|ACU85238.1| aspartyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 609

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/602 (38%), Positives = 340/602 (56%), Gaps = 28/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L    +G  V L+GW+ R R HGG+ FLD+RD  G+TQVV   D A       
Sbjct: 3   RTHTAGELRPEHIGQTVTLTGWIGRRRDHGGVTFLDLRDASGVTQVVVREDEAMH----- 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL + G V  R     N  + TG IE++A ++E+LS +  LP  +    +  E  
Sbjct: 58  LRNEYVLKVIGSVGRRPEGNENPLLPTGDIEVTASEVEVLSASAPLPFQLDEHTDVGEEA 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR      +  R+ +  + R  ++ ++F+E  TP LT S+PEGARDFLVP+
Sbjct: 118 RLRYRYLDLRRQGPAAAMRLRSEVNRAARDTLLDQDFVEVETPTLTRSTPEGARDFLVPA 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G ++YFQ+A C+RDED R+DR P EF QLD+EMSFV
Sbjct: 178 RLAPGSWYALPQSPQLFKQLLMVGGIEKYFQLARCYRDEDFRADRQP-EFTQLDVEMSFV 236

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +Q+D++   E +L  V+ +   G+ ++  F RI Y +++RR+G+DKPDLR  + +  +T+
Sbjct: 237 DQEDVIALAEEILTAVWAK--GGHQITTPFPRITYAESMRRFGSDKPDLRFDLELVEMTD 294

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    + A G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 295 YFRETPFRVFQAP------YVGAVVMAGGAAQPRRQLDAWQEWAKQRGAKGLAYVL--VQ 346

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPV+K+++      +        GD  FF AG+     +    AR  IA+ L
Sbjct: 347 EDGTL--TGPVSKNISEAEKSGLLEATGASRGDCIFFAAGEAKSSRALLGAARAEIAERL 404

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE-KKIDFA---------HNPFTMPQGGMESLKGNDL 474
           G+I+ + F F W++D P +E   +     D A         H+ FT P+         D 
Sbjct: 405 GLIDHDAFAFVWVVDAPMFEPAADAVASGDVAVGGGAWTAVHHAFTSPKPEFMDSFDTDP 464

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A+ YD+VCNG EI  G IR H   V  + F  +GI  E  + +FG L  AFQ G P
Sbjct: 465 GAALAYAYDIVCNGNEIGGGSIRIHDQSVQQRVFQVMGIGAEEAQEKFGFLLDAFQYGAP 524

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRIV LL    ++REV  FP + N  D L  +P+ ++ +Q +E G+     
Sbjct: 525 PHGGIAFGWDRIVALLAREDSIREVIAFPKTGNGYDPLTAAPAPITPQQRKEAGVDTKPA 584

Query: 595 PK 596
           P+
Sbjct: 585 PR 586


>gi|294618766|ref|ZP_06698293.1| aspartyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291594954|gb|EFF26304.1| aspartyl-tRNA synthetase [Enterococcus faecium E1679]
          Length = 589

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/592 (39%), Positives = 343/592 (57%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+     +EIA
Sbjct: 4   RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V  R    +N  + TG+ E+ A +I IL+ A+  P  +  ++   +
Sbjct: 64  DKCRSEYVIEVTGEVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KNI  R     ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E   G  V+  F R+ YD+AI RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEV-RGIEVTLPFPRMTYDEAIARYGSDKPDTRFDMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++     EF+VF   +++  G  V A+ AKG     +R   D++ ++    G  GLA++ 
Sbjct: 302 SDTVKEVEFKVFQ--MALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK +    TEAI    D + GD   F A       +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFMGEA-TEAIIKATDAKPGDLLMFGADKSEIVAAALGAIRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP+     L   D   + A 
Sbjct: 414 GKELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  +    +G +KE +E +FG L  A   G PPHGGIA
Sbjct: 474 AYDIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQMEEQFGFLLTALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR  MLL G  N+REV  FP +    D++  +PS VS  QL EL + + 
Sbjct: 534 LGLDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585


>gi|15611627|ref|NP_223278.1| aspartyl-tRNA synthetase [Helicobacter pylori J99]
 gi|6919975|sp|Q9ZLL9|SYD_HELPJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|4155111|gb|AAD06143.1| ASPARTYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 579

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/589 (38%), Positives = 344/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R A   N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKSVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++DD++  +E++L+ +F+    G+T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DEDDVMGVVEDLLQEIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNSIFSNIAQDPKDKRIKALNVKGADAVFSRSVLKELEEFVRQFGAKGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  R D Q GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W++ FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVHFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|168698078|ref|ZP_02730355.1| aspartyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 630

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 249/637 (39%), Positives = 345/637 (54%), Gaps = 63/637 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RTH+C  L    VGS   L+GWV   R +G  +F+D+RD YG+TQVV     D+  F  A
Sbjct: 6   RTHTCDQLREEHVGSTATLNGWVLTARDNGHQVFIDLRDRYGLTQVVFRKADDAELFACA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGEREY 120
           + +++EWVL + G V  R      A+I TG IEL A+ + +L+    LP  V  FG    
Sbjct: 66  QRLKAEWVLSVTGTVQKRLEGAARADIATGAIELEAKTLRVLNECPPLPFQVDEFGTELA 125

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YR+LDLRR TL K +V R R+   +R  M A +F+E  TP+L  S+PEGARD+
Sbjct: 126 NEDLRLQYRYLDLRRRTLQKTLVLRHRLCKVIRDYMDANHFLEVETPLLGKSTPEGARDY 185

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  G F+ALPQ+PQ YKQLLM SG+DRYFQIA C RDED R+DR P EF QLD+E
Sbjct: 186 LVPSRVFNGEFFALPQSPQLYKQLLMISGYDRYFQIARCLRDEDLRADRQP-EFTQLDVE 244

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVE++D+L+ ME +   +F++   G  +   F R+ Y +A+ +YG+DKPDLR  + + 
Sbjct: 245 MSFVEREDVLSVMEKLAADIFDK-CLGVKLPLPFPRLGYAEAMAKYGSDKPDLRFGLEIV 303

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWARSQGQ 353
           ++T+    SE +      +V  G  V AI AKGG    AF +        + + A +   
Sbjct: 304 DITDIAGASEAQFLKD--AVAGGGVVRAINAKGGAA--AFSNTALKPGGELPKVAETYKA 359

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLA   W   E G     G   K  +      ++ RL   DGD   F+A      C   
Sbjct: 360 KGLA---WMKVEGGKFT--GSTEKFFSDELKAKLKERLSAADGDLLLFVADKEAVVCDAL 414

Query: 414 ADARNHIAQELGIIN-----------------------------------CNCFEFCWIM 438
              R H+A +L +                                        F F W++
Sbjct: 415 GALRIHLATKLKLYKNWWDEKAEHEKAEKDKADAAKKKKEVYVPVPFQPRAEHFNFAWVL 474

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESL----KGNDLLSIKAFQYDLVCNGFEIASG 494
           DFP + WNEEE + D  H+PFT P    E L    +   L  ++A  YD+V NG+E+  G
Sbjct: 475 DFPMFTWNEEENRWDAMHHPFTAPMD--EDLPNFWQNESLGKVRAKAYDMVLNGYEVGGG 532

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            IR H  +V  + F   G++ E  + RFG L  A + G PPHGGIA G+DR  M++ G  
Sbjct: 533 SIRIHRQDVQSRVFEIFGMTPEDAQGRFGFLLDALKSGAPPHGGIALGLDRWAMVIAGTT 592

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           N+R+V  FP +Q   DL+ G+P+ V   QL+ELG+++
Sbjct: 593 NIRDVIAFPKNQKARDLMTGAPAAVDARQLKELGVKL 629


>gi|305681447|ref|ZP_07404254.1| aspartate--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659652|gb|EFM49152.1| aspartate--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 593

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 247/606 (40%), Positives = 342/606 (56%), Gaps = 29/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  GDL     G  V L+GWV R R HGG+IF+D+RD  GI QVV   D A  E A  
Sbjct: 3   RTHLAGDLRKETAGQTVTLTGWVARRRDHGGVIFIDLRDSSGIAQVVFR-DPAVAETAHH 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER---EYP 121
           +RSE+ + + G+V +R A + N N+ +G IE++  ++++L+ A  LP  +       E  
Sbjct: 62  LRSEFCIKVTGVVEARPAGSENPNLASGDIEVNVTELDVLNEAAALPFQIDDTAKGGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR      +  R+    + R  +   +F+E  TP LT S+PEGARDF+
Sbjct: 122 EETRLKYRYLDLRRPAQGGALRLRSEANKAARRVLEKHDFVEIETPTLTRSTPEGARDFV 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLLM +G +RY+Q+A C+RDED R+DR P EF QLDMEM
Sbjct: 182 VPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQLARCYRDEDFRADRQP-EFMQLDMEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+DI+  +E +L  +++    G T+     R+ Y +A+R YG+DKPDLR  I +  
Sbjct: 241 SFVDQEDIIAIVEEILVALWQLI--GYTIPTPIPRMTYAEAMRDYGSDKPDLRFDIKLVE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE F ++ FRVF         Y    + A G    R   D   EWA+ +G  GLAYI  
Sbjct: 299 CTEFFSNTPFRVFQN------EYVGAVVMAGGASQPRRQLDAWQEWAKQRGAKGLAYIL- 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G  +  GPVAK+L+      I   +  Q GD  FF AG+     +    AR  IA
Sbjct: 352 -IGEDGEAS--GPVAKNLSDAERNGIAAHVGAQPGDCIFFAAGETKASRALLGAARGEIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKG 471
           ++LG+I    + F W++D P +E + E K   D A         H+ FT P         
Sbjct: 409 RKLGLIKEGDWAFTWVVDAPMFEPSAEAKASGDVALGHSAWTAVHHAFTAPTDECLDTFD 468

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D  S  +  YD+VCNG EI  G IR H  +V  + F  +GI++E  + +FG L  AF  
Sbjct: 469 TDPGSALSNAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAQEKFGFLLDAFAF 528

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G DRIV LL G  ++R+V  FP S    D L  +P+ +S +Q +E G+  
Sbjct: 529 GAPPHGGVALGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPISAQQRKETGVDF 588

Query: 592 VENPKK 597
              PKK
Sbjct: 589 --KPKK 592


>gi|126668401|ref|ZP_01739358.1| aspartyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126627110|gb|EAZ97750.1| aspartyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 610

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/596 (39%), Positives = 354/596 (59%), Gaps = 9/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG++  S +   V L GWVHR R HGG+IFLD+RD  GI+QVV +PD    F +A+
Sbjct: 2   RSHYCGEINESHIDQEVTLCGWVHRRRDHGGVIFLDLRDRDGISQVVVDPDVPESFALAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R A T N+N+ TGQ+EL  +++ IL+ A   P P+    +  E 
Sbjct: 62  KVRSEYVVKITGRVRRRPAGTENSNMATGQVELLGKEVIILNAAATPPFPLDEHVDVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YRF+DLRR  +   +  R+R+ + +R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLRYRFIDLRRPEMLNRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++GSF+ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHEGSFFALPQSPQLFKQMLMVSGVDRYYQIAKCFRDEDLRADRQP-EFTQVDVEASF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V ++D++   E+++R +F++          F R+ + +A+ RYG+DKPDLR P+ + +V 
Sbjct: 241 VNEEDLMTLNEDMIRALFKDVMQVEL--PEFPRMSHSEAMDRYGSDKPDLRIPLELQSVD 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + +F+VF+   + + G         GG  +R   D   ++    G  GLAYI    
Sbjct: 299 DLVANVDFKVFAGPANDDEGRVAALRVPNGGALSRKQIDEYTKYVGIYGARGLAYIKINE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422
              G      P+ K L      +I  R+  QDGD  FF A D     + A  A R  +  
Sbjct: 359 LAKGVEGLQSPIVKFLGADVALSIIERVGGQDGDIVFFGA-DKTNVVNEALGALRIKVGH 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L ++ C  +   W++DFP +E    +  +   H+PFT P    E L  N   ++ +  Y
Sbjct: 418 DLNLLTCQ-WAPMWVVDFPMFE-ELPDGGLTAIHHPFTAPSCSPEELAANPATAL-SRAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  ++  + F  +GI++E    +FG L  A + G PPHGG+A G
Sbjct: 475 DMVLNGTELGGGSIRIHDQQMQQEVFRILGITEEESRAKFGFLLDALKFGCPPHGGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +DR+VML+ G+ ++R+V  FP +Q+   L+  +P  V  +QLREL +R+ ++ K +
Sbjct: 535 LDRLVMLMTGSSSIRDVIAFPKTQSATCLMTQAPGAVDEKQLRELHIRLRKSAKAV 590


>gi|258515494|ref|YP_003191716.1| aspartyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779199|gb|ACV63093.1| aspartyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 608

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 235/590 (39%), Positives = 348/590 (58%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ C DL    VG  V L GWV + R HGG+IF+D+RD  G+ Q+V +PD A   F  A
Sbjct: 23  RTNYCEDLNKQMVGQAVVLMGWVSKRRDHGGLIFVDLRDRSGLVQLVFSPDLAVDAFHKA 82

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++R+E+VL I G +  R   T N N++TG+IE+   ++ IL+ A+  P  V    +  E
Sbjct: 83  EAIRNEYVLAIAGTIRPRPEGTENYNLVTGEIEVICHELRILNTAKTPPFYVEDGIDVDE 142

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YR+LDLRR  + ++I  R +     R  +    F E  TP+LT S+PEGARD+LV
Sbjct: 143 NLRLRYRYLDLRRPEMQRSIYLRHKTSKVARDFLDENGFWEIETPMLTKSTPEGARDYLV 202

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQ+LM +G +RYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 203 PSRINPGKFYALPQSPQIFKQILMVAGMERYFQIVRCFRDEDLRADRQP-EFTQIDLEMS 261

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +D+L  ME ++  ++ E +  + +S  F R+ Y +AI R+G+DKPD R  + + ++
Sbjct: 262 FVDVEDVLLLMEKLVSRLYLETAGLDLIS-PFPRLTYQEAIDRFGSDKPDTRFGLELCDL 320

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++  +   F+VFS   +V  G +V  I AKG G  +R   D + ++A      GLAYI  
Sbjct: 321 SDIALGCGFKVFSA--AVKNGGQVKGINAKGCGSLSRKEIDDLTKFAAIYRAKGLAYIIV 378

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             +   +V     +AK         I  R+  + GD   F+A             R H+A
Sbjct: 379 SDEGVKSV-----IAKFFTEEELNTIVSRMRGEPGDLLLFVADTSETVAGALGALRLHLA 433

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L II  N   F W+ DFP   ++ EEK+    H+PFT P+    +L   +   ++A  
Sbjct: 434 EMLNIIPENLNNFLWVTDFPLLAYDPEEKRYAAMHHPFTAPRDEDIALMETEPGKVRAKA 493

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR H  +V  + F+ +G+S EV   +FG +  AF+ G PPHGG A 
Sbjct: 494 YDLVLNGVEVGGGSIRIHRRDVQEKMFAAIGLSAEVAREKFGYMLEAFEFGTPPHGGFAF 553

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR++M+L G K++R+V  FP +Q+   L+  +PS V  +QL+EL ++I
Sbjct: 554 GFDRLIMILAGKKSIRDVIAFPKTQSATCLMTQAPSEVEDKQLKELHIKI 603


>gi|255348919|ref|ZP_05380926.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503459|ref|ZP_05381849.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 70s]
          Length = 582

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/595 (40%), Positives = 348/595 (58%), Gaps = 20/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSAC 58
           +YRTH C +L +  VG  VRLSGWVHR R HGG++F+D+RD +GITQ+V     NP+   
Sbjct: 2   KYRTHKCNELSLDHVGEHVRLSGWVHRYRNHGGVVFIDLRDCFGITQIVCRQEENPE--L 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            ++   VRSEWVLC++GLV +R     N N++TG IE+    +E+LS A+ LP  +  E 
Sbjct: 60  HQLMDQVRSEWVLCVEGLVCARLEGMENPNLVTGSIEVEVSSLEVLSRAQNLPFSISDEH 119

Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R  YR+LD+RR  +   ++ R +++ + R  +  + F E  TPIL  S+PEGA
Sbjct: 120 INVNEELRLTYRYLDMRRGDILDRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGA 179

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSR+  G+FYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+
Sbjct: 180 RDYLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFTQI 238

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF   +D+   +E ++  +F     G  +   FLR+ Y +A   YGTDKPDLR  +
Sbjct: 239 DMEMSFGGPEDLFPVVEELVTRLFA--VKGIELKAPFLRMTYQEAKDSYGTDKPDLRFGL 296

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + N  E+     F +F   L+     + + +P  G   +R   D   ++ +  G  GL 
Sbjct: 297 RLKNCCEYARKLTFSIFLDQLAYGGTVKGFCVPG-GADMSRKQLDIYTDFVKRYGAMGLV 355

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-A 416
              W   + G+V+    VAK  +    + +      +D D    IA  P    + A D  
Sbjct: 356 ---WIKKQDGSVS--SNVAKFASEDVFQEMFEAFKAKDQDILLLIAA-PEAVANQALDHL 409

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  IA+E  + +   + F WI DFP +   +EE ++   H+PFT P     SL  +D  +
Sbjct: 410 RRLIAKERQLYDSTQYNFVWITDFPLF--AKEEGELCPEHHPFTAPLDEDISLLDSDPFA 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +++  YDLV NG+EIASG  R H  ++  + F+ + +S+E V+ +FG    A   G PPH
Sbjct: 468 VRSSSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFGFFIDALSFGTPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GIA G+DRI+M+L GA+ +REV  FP +Q   DL+M +PS +   QL+ELGL++
Sbjct: 528 LGIALGLDRIMMVLTGAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582


>gi|224533525|ref|ZP_03674114.1| aspartyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|224513198|gb|EEF83560.1| aspartyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
          Length = 586

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 230/592 (38%), Positives = 353/592 (59%), Gaps = 12/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+ N +    +IA+
Sbjct: 2   FKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVN-EEKLLKIAE 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + I GL++ R    INAN+ TG  E+ A+ IEI+S   ELP  +  +    E+
Sbjct: 61  KIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + +YR+LDLRRD+L   I+ R +  + +R  +I   F+E  TP    S+PEGARDF++P
Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++++I   +EN+L  +F+   N N +   F +I Y  A+ +YG+DKPD R  + + +++
Sbjct: 240 VKKENIFKLIENMLFLIFKNCININ-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
            +  +SEF +F   L      ++  +  K    +RA  + + E A+     GL   F ++
Sbjct: 299 RNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY--FTKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422
           +   N    G +AK L     E I+    +++ D  FF A +  +  C      R  IA 
Sbjct: 357 E---NNKFSGGIAKFLKTEEQELIKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIAN 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481
           +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+   + +L+ N   +I    
Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI- 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE +E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV+
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583


>gi|296107056|ref|YP_003618756.1| aspartyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|295648957|gb|ADG24804.1| aspartyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 580

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 230/575 (40%), Positives = 341/575 (59%), Gaps = 8/575 (1%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMS 79
           + + GWVH  R HGG+IFLDIRD  G+ QVV  P++   F IA+ +RSE+V+ + G+V  
Sbjct: 5   ITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAEKLRSEFVVRVTGIVRK 64

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
           R    IN  + TG++E+   ++EIL+ +   P      +   E +R+KYR++DLRR  + 
Sbjct: 65  RPEGMINDKMETGRVEVIGTQLEILNQSPTPPFLPDDHQIINEDLRYKYRYIDLRRAVMQ 124

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           K +  R ++ + +R  +  +NF++  TP+LT ++PEGARD+LVPSRV+ G FYALPQ+PQ
Sbjct: 125 KKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVPSRVHPGQFYALPQSPQ 184

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            +KQLLM SGFD+Y+QI  CFRDED R+DR P EF QLD+EM+F+ ++DIL  +E +L+ 
Sbjct: 185 LFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAFINEEDILQLIEGLLKI 243

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           VF+E  N  T+ +   R+ Y +A+ RYG+DKPDLRNP+ + ++ +     +F VFS   +
Sbjct: 244 VFKEILN-ITLPDKLPRMSYKEAMTRYGSDKPDLRNPLELIDIADLVKDCDFNVFSSAAN 302

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM-GPVAKH 378
            N G  V      G   +R   D   ++    G  GLAYI    D S  +AG+  P+ K 
Sbjct: 303 DNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVN-DLSAGMAGLQSPILKF 361

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
           L+    ++I  R++ Q GD  FF A             RN +  +  +IN   ++  W++
Sbjct: 362 LSETAVQSILNRVEAQTGDVIFFGADKAHVVNESMGALRNKLGHDRNLINSG-WQLLWVV 420

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           D+P +E + +  K+   H+PFT PQ    E+L+     ++ A  YD+V NG+EI  G IR
Sbjct: 421 DWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTL-AKAYDIVINGYEIGGGSIR 479

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            H  E+    F  +GI ++    +FG L  A Q G PPHGGIA GIDR+ MLL  + ++R
Sbjct: 480 IHQPELQKTVFDLIGIGEQEAHEKFGFLLDALQYGAPPHGGIALGIDRLAMLLTDSTSIR 539

Query: 558 EVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +V  FP +Q     L  +PS     QL ELG+R+ 
Sbjct: 540 DVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLA 574


>gi|89255468|ref|YP_512829.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115313996|ref|YP_762719.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156501393|ref|YP_001427458.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167009307|ref|ZP_02274238.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|290954556|ref|ZP_06559177.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295311996|ref|ZP_06802816.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|122325940|sp|Q0BPA2|SYD_FRATO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123094553|sp|Q2A622|SYD_FRATH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225346|sp|A7N949|SYD_FRATF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|89143299|emb|CAJ78461.1| Aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115128895|gb|ABI82082.1| aspartate--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156251996|gb|ABU60502.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 590

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/590 (38%), Positives = 346/590 (58%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 2   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 62  LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E + G   +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 241 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 300 DMQNEEFKVFSGPAN-DPQSRVIALRISGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++ D  FF AG            R  I +
Sbjct: 359 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEDDLLFFGAGKTKIVNDSMGALRAKIGE 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E  +++ ++   H+PFT P+   +E L   +   + +  
Sbjct: 419 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS +    +FG +  A   G P HGGIA 
Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ +
Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 585


>gi|15605271|ref|NP_220057.1| aspartyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76789279|ref|YP_328365.1| aspartyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237804893|ref|YP_002889047.1| aspartyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311360|ref|ZP_05353930.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317661|ref|ZP_05358907.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|6919971|sp|O84546|SYD_CHLTR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|97196627|sp|Q3KLF5|SYD_CHLTA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3328981|gb|AAC68144.1| Aspartyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76167809|gb|AAX50817.1| aspartyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273193|emb|CAX10106.1| aspartyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|297748672|gb|ADI51218.1| Aspartyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749552|gb|ADI52230.1| Aspartyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 582

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/595 (40%), Positives = 348/595 (58%), Gaps = 20/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSAC 58
           +YRTH C +L +  VG  VRLSGWVHR R HGG++F+D+RD +GITQ+V     NP+   
Sbjct: 2   KYRTHKCNELSLDHVGEHVRLSGWVHRYRNHGGVVFIDLRDCFGITQIVCRQEENPE--L 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            ++   VRSEWVLC++GLV +R     N N++TG IE+    +E+LS A+ LP  +  E 
Sbjct: 60  HQLMDQVRSEWVLCVEGLVCARLEGMENPNLVTGSIEVEVSSLEVLSRAQNLPFSISDEH 119

Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R  YR+LD+RR  +   ++ R +++ + R  +  + F E  TPIL  S+PEGA
Sbjct: 120 INVNEELRLTYRYLDMRRGDILDRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGA 179

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSR+  G+FYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+
Sbjct: 180 RDYLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFTQI 238

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF   +D+   +E ++  +F     G  +   FLR+ Y +A   YGTDKPDLR  +
Sbjct: 239 DMEMSFGGPEDLFPVVEELVARLFA--VKGIELKAPFLRMTYQEAKDSYGTDKPDLRFGL 296

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + N  E+     F +F   L+     + + +P  G   +R   D   ++ +  G  GL 
Sbjct: 297 RLKNCCEYARKFTFSIFLDQLAYGGTVKGFCVPG-GADMSRKQLDIYTDFVKRYGAMGLV 355

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-A 416
              W   + G V+    VAK  +    + +    + +D D    IA  P    + A D  
Sbjct: 356 ---WIKKQDGGVS--SNVAKFASEDVFQEMFEAFEAKDQDILLLIAA-PEAVANQALDHL 409

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  IA+E  + +   + F WI DFP +   +EE ++   H+PFT P     SL  +D  +
Sbjct: 410 RRLIARERQLYDSTQYNFVWITDFPLF--AKEEGELCPEHHPFTAPLDEDISLLDSDPFA 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +++  YDLV NG+EIASG  R H  ++  + F+ + +S+E V+ +FG    A   G PPH
Sbjct: 468 VRSSSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFGFFIDALSFGTPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GIA G+DRI+M+L GA+ +REV  FP +Q   DL+M +PS +   QL+ELGL++
Sbjct: 528 LGIALGLDRIMMVLTGAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582


>gi|315651809|ref|ZP_07904813.1| aspartate--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485939|gb|EFU76317.1| aspartate--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 594

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/594 (39%), Positives = 351/594 (59%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           R+H C ++  + + S V + GWV + R  GGIIF D+RD  GI Q++   D   S  F  
Sbjct: 10  RSHRCAEVVNAPLESEVTVMGWVQKNRNKGGIIFCDLRDRSGILQIIFEEDECGSEVFNK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  ++ E+ + + G++  RS    N ++ TG++E+ A  + ILS +E  P  +  + +  
Sbjct: 70  AMKLKQEFCIAVTGILKKRSG-AFNESLKTGELEVRAMGLRILSESETPPFHIEEDSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYRFLDLRR  L +N++ R+++  + R  +    F+E  TP L  SSPEGARD+L
Sbjct: 129 EELRLKYRFLDLRRPDLQRNLMVRSKVATTTRNFLAENGFLEIETPTLIKSSPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  GSFYALPQ+PQ +KQLLM SG+DRYFQ+A C+RDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVYPGSFYALPQSPQLFKQLLMVSGYDRYFQLARCYRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+L+  E +L+ +F++  + + +     R+ + +A+ R+G+DKPDLR  + + +
Sbjct: 248 SFVDVDDVLDVNERLLQRLFKDVLDID-IKLPIQRMTWQEAMDRFGSDKPDLRFGMELKD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V++    SEF VF   L+   G  V  I A G  G  R   D + E+ +S    GLAY+ 
Sbjct: 307 VSDIVKDSEFAVFKNALA--NGGSVRGINASGQAGMPRKKIDALVEFVKSYKAKGLAYMA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D S   +     AK +     E +R  LD + GD  FF A             R  +
Sbjct: 365 VEADGSIKSS----FAKFMKEEEIEGLRKALDAKPGDMLFFAADSNKIVWDTLGALRVEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A +LG++  + + F W+  FP  EW++EE +    H+PFT P         +D   ++A 
Sbjct: 421 ANQLGLLKKDDYRFLWVTQFPLLEWSDEENRFKAMHHPFTAPMDEDWQYIDSDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H +++  + F  +G+SKEV + RFG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTEIGGGSVRIHQADIQSKMFDVLGLSKEVADERFGYLLEAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+VML++GA ++R+V  FP  ++  DL+  +P  V   QL+ELG++I EN
Sbjct: 541 YGLDRVVMLMVGADSIRDVIAFPKVKDASDLMTNAPDKVDDAQLKELGIKIEEN 594


>gi|257462976|ref|ZP_05627380.1| aspartyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060593|ref|ZP_07925078.1| aspartyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313686269|gb|EFS23104.1| aspartyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 594

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 243/595 (40%), Positives = 358/595 (60%), Gaps = 20/595 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61
           YR+H+ G+L   ++G  V LSGWV   R  GG+ F+D+RD  G TQ+V + D    +I  
Sbjct: 3   YRSHNLGELRKGNIGQVVTLSGWVDTKRDLGGLTFIDLRDREGKTQIVFDIDYTSRDIIE 62

Query: 62  -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
            A+ +R+E V+ + G V  R+++  N NI TG+IE+  +++EIL+  E LP  + G E  
Sbjct: 63  KAQKLRNEAVIKVVGEVKERASK--NLNIPTGEIEVFVKELEILNQCEVLPFQITGIEEN 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+IR KYR+LD+RR  + +N+  R R+I ++R  M    F++  TPILT S+PEGARD
Sbjct: 121 LNENIRLKYRYLDIRRPNMIQNLKMRHRMIMAIRNYMDQAGFLDVDTPILTKSTPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR+N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD+
Sbjct: 181 FLVPSRINGGTFYALPQSPQIFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLDV 239

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV QD+++N +E + + VF+  + G   +  F R+ Y  A+  YG+DKPDLR  + +
Sbjct: 240 EMSFVTQDEVMNEIEGLAKYVFKHVT-GEEANYTFERMPYAVAMGEYGSDKPDLRFEVKL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQ-GQPGL 356
            ++++    S F+ FS   +V  G  V AI  P      +R       ++A+   G  G+
Sbjct: 299 KDISDLAAKSSFKAFSS--TVENGGIVKAIVAPKAFEKFSRKLLGEYEDYAKQYFGAKGM 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AYI  ++ E+G ++   P+AK       +AI  R   + GD    IA D +K    A  A
Sbjct: 357 AYI--KIAENGEIS--SPIAKFFREEEMKAILDRTGAEAGDVILIIA-DRVKTVHAALGA 411

Query: 417 -RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDL 474
            R  + +ELG+I+ N ++F W++DFP +E++EEE +    H+PFT + +  ME       
Sbjct: 412 LRLRVGKELGLIDRNAYKFLWVVDFPMFEYDEEEGRYKAEHHPFTSIKEEDMEKFLQGQT 471

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +I+   YDLV NG EI  G IR   +EV  + F  + +S E  + +FG    AFQ G P
Sbjct: 472 DNIRTDTYDLVLNGSEIGGGSIRISNTEVQAKVFERLSLSPEEAKEKFGFFLEAFQYGAP 531

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PHGG+A GIDR +M++L  +++R+V  FP +     L+  +P  V  +QL EL L
Sbjct: 532 PHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPGKVEEKQLEELFL 586


>gi|309810778|ref|ZP_07704584.1| aspartate--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308435258|gb|EFP59084.1| aspartate--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 675

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 238/596 (39%), Positives = 334/596 (56%), Gaps = 26/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  +DVG  V L+GWV + R HGG+ F+D+RD  G+ QVVA  D      A  
Sbjct: 67  RTHEAGTLRAADVGDTVTLTGWVAKRRDHGGVAFVDLRDASGVVQVVAR-DEVLTGAAHG 125

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + + G V +R  + +N N+ TG++++ A +IE+LS A  LP  +       E  
Sbjct: 126 LRSEYCIKVTGEVAAREPKDVNPNLPTGEVDVVANEIEVLSEAAPLPFQIDERITVGEEA 185

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR      I  R+++  + R  +   +F+E  TP LT S+PEGARDFLVP+
Sbjct: 186 RLKYRYLDLRRKDQGDAIRLRSKVSQAARAVLNERDFVEIETPTLTRSTPEGARDFLVPA 245

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 246 RLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 304

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E + + V+     G  +   F R+ Y DA+ +YG+DKPDLR    +   TE
Sbjct: 305 EQDDVIELGEQIAKAVWATI--GVDLPTPFPRMTYADAMAKYGSDKPDLRFGNELVECTE 362

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 363 FFRDTTFRVFQAEY-------VGAVVMPGGASQPRRQLDAWQEWAKQRGAKGLAYVL--V 413

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G++   GPVAK+L       +   +  + GD  FF AG      +    AR  I + 
Sbjct: 414 QEDGSL--TGPVAKNLTETEVAGLAGHVGAKPGDCIFFAAGATKASRALLGAARLEIGKR 471

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEE-KKIDFA---------HNPFTMPQGGMESLKGND 473
             +I+ N + F W++D P +E   +     D A         H+ FTMP+         +
Sbjct: 472 CDLIDENAWSFLWVVDAPLFEPAADAVASGDVAVGSGTWTAVHHAFTMPKAEYVDTFDTE 531

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                A+ YD+VCNG EI  G IR H  ++  + F  +G+S+E  + +FG L  AF  G 
Sbjct: 532 PGEALAYAYDMVCNGNEIGGGSIRIHRKDLQERVFKVMGLSEEDAQEKFGFLLEAFSFGA 591

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ +S +Q +E G+
Sbjct: 592 PPHGGIAFGWDRIVSLLAGTDSIRDVIAFPKSGGGYDPLTAAPAPISAQQRKEAGV 647


>gi|292559399|gb|ADE32400.1| putative AspRS [Streptococcus suis GZ1]
          Length = 553

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 234/565 (41%), Positives = 338/565 (59%), Gaps = 23/565 (4%)

Query: 34  GGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCIDGLVMSRSAETINANII 90
           GG+IF+D+RD  GI Q+V NP+S   E+   A+S+RSE+V+ + G V+ R  E  N NI 
Sbjct: 2   GGLIFIDLRDREGIMQLVINPESVEAEVMAKAESLRSEFVIEVTGTVVER--EQANDNIP 59

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIIN 150
           TG +EL    + +L+ A+  P  +    E  +  R +YR+LDLRR  +  N   R  + +
Sbjct: 60  TGAVELQVTSLTVLNTAKTTPFEIKDGIEASDDTRLRYRYLDLRRPEMLNNFKLRAAVTH 119

Query: 151 SMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF 210
           S+R  +    FI+  TP+LT S+PEGARD+LVPSRV++G FYALPQ+PQ  KQLLM +GF
Sbjct: 120 SIRNYLDDLEFIDVETPMLTKSTPEGARDYLVPSRVSKGHFYALPQSPQITKQLLMNAGF 179

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
           DRY+QI  CFRDED R DR P EF Q+D+E SF+ + +I + +E ++  V ++ + G  V
Sbjct: 180 DRYYQIVKCFRDEDLRGDRQP-EFTQVDLETSFLNEVEIQDIVEGLIAKVLKD-TKGIDV 237

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           +  F R+ YD A+  YG+DKPD R  +++ ++TE     +F+VFS+   V       AI 
Sbjct: 238 TLPFPRMAYDHAMNFYGSDKPDTRFEMLLQDLTELVKEVDFKVFSEAPVVK------AIV 291

Query: 331 AKGGGGN--RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIR 388
            KG   +  R   D++ ++A+  G  GLA   W   + G +AG  PVAK L  + TE + 
Sbjct: 292 VKGAADSYSRKDIDKLTDYAKQFGAKGLA---WVKVDKGELAG--PVAKFLTGI-TEKLT 345

Query: 389 VRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNE 447
             L ++D D   F+A D L+  +    A RN +A+E G+I+ + F F WI+D+P +EW+E
Sbjct: 346 ASLQLEDKDLVLFVA-DELEVANNTLGALRNRLAKEQGLIDESKFNFLWIVDWPMFEWSE 404

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
           EE +   AH+PFT+P          DL  ++A  YD+V NG+E+  G +R +  ++  Q 
Sbjct: 405 EEGRYMSAHHPFTLPTEETAHHLDGDLAQVRAVAYDIVLNGYELGGGSLRINQKDMQEQM 464

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           F  +G S E    +FG L  A   G PPHGG+A G+DR VMLL G  N+REV  FP +  
Sbjct: 465 FKALGFSAEDAHEQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGEDNIREVIAFPKNNK 524

Query: 568 FCDLLMGSPSTVSVEQLRELGLRIV 592
             D +  +PSTV+  QL EL L I 
Sbjct: 525 ASDPMTQAPSTVASAQLEELALDIT 549


>gi|238925266|ref|YP_002938783.1| aspartyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|259511859|sp|C4ZI12|SYD_EUBR3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238876942|gb|ACR76649.1| aspartyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 598

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 233/593 (39%), Positives = 350/593 (59%), Gaps = 13/593 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60
           +R+H C ++  +++G  V + GWV + R  G +IF+D+RD  GI Q+V    N  +  FE
Sbjct: 9   HRSHRCTEVSNANIGEKVTVMGWVQKRRNLGSLIFVDLRDRSGILQIVFGEENVGAEGFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A ++RSE+V+ ++G V  R+A  +N ++ TG IE+ A  I +LS A+  P  +    + 
Sbjct: 69  KAGTLRSEFVIAVEGTVQKRTA-AVNESLKTGDIEVIATSIRVLSEAQTPPFHIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LDLRR  + +N++ R+ ++  MR  M  E F+E  TPIL  S+PEGARD+
Sbjct: 128 SEDIRLKYRYLDLRRPDIQRNLMLRSNVLRVMRDFMANEGFLEIETPILCKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQ+PQ +KQLLMASG+DRYFQIA CFRDED R+DR P EF Q DME
Sbjct: 188 LVPSRIHHGHFYALPQSPQLFKQLLMASGYDRYFQIARCFRDEDLRADRQP-EFTQADME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD++   E +L+ +F+E  N + V   F R+ + +A+ R+G+DKPD R  + + 
Sbjct: 247 LSFVDIDDVIEVNERLLKHLFKEVINVD-VEIPFKRMPWQEAMDRFGSDKPDTRFGMELC 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           +V+E      F VF+  L    G  V  I  +G     R   D++ E A+  G  GLAY+
Sbjct: 306 DVSEVVKDCGFGVFTGALE--NGGSVRGINVEGQAKMPRKKIDKLVEHAKGCGAKGLAYL 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              ++E G        AK +     +A+  +++ + GD   F A       +     R  
Sbjct: 364 C--INEDGTYK--SSFAKFMTEAELDALVAKMNGKPGDLLLFAADKNKIVWNVLGALRLM 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  ELG+I+ N + F W+ +FP  EW++EE +    H+PFTMP         +D  +++A
Sbjct: 420 LGAELGLIDENKYNFLWVTEFPLLEWSDEENRFMAMHHPFTMPMEEDWDKIDSDPGAVRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G +R H  ++  + F  +G +KE    +FG L  AF  G+PPH G+
Sbjct: 480 KAYDIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKERAHEQFGFLLDAFSYGVPPHAGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DRI M +L   N++EV  FP  ++  DL+  +P TV  +QL ELG+ + 
Sbjct: 540 AFGVDRICMHMLHTDNIKEVIAFPKVKDASDLMSEAPGTVDPKQLEELGIAVA 592


>gi|87311863|ref|ZP_01093975.1| Aspartyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87285394|gb|EAQ77316.1| Aspartyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 594

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 242/604 (40%), Positives = 359/604 (59%), Gaps = 20/604 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RTH+CG+L  + +G  V L GWV   R HGG +F+D+RD YG TQVV +P+S  A  E A
Sbjct: 3   RTHTCGELRAAQIGLEVTLCGWVDSYRDHGGGLFIDLRDRYGKTQVVFSPESGAAVQEAA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP-LPVFGEREYP 121
           + +R+E V+ + G V +R A T+N  +ITG+IE+   ++EIL+  +  P LP   +++ P
Sbjct: 63  RGLRNEDVIKVRGQVSARPAGTVNPKLITGEIEIRCVELEILNKCKTPPFLPT--QQDMP 120

Query: 122 -ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R K+R+LDLRR  + + ++ R+RII  MR     + FI+  TPIL  S+PEGARD+
Sbjct: 121 GEDLRLKHRYLDLRRPAMQETLMLRSRIIKMMRDYFEEQQFIDVETPILGRSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ YKQ+LM +G+DRY Q+A CFRDED R+DR P EF QLD+E
Sbjct: 181 LVPSRVHHGHFYALPQSPQLYKQILMMAGYDRYVQVARCFRDEDLRADRQP-EFTQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FV++DD++  ++ +++   +E   G  V     ++ YD+A+ R+G D PDLR  + + 
Sbjct: 240 MAFVDKDDVIGIIDGLVQRTAKEL-KGLDVQLPLPQMTYDEAMERFGHDAPDLRFGMELV 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQ-GQPGLA 357
           + T+    +EFRVF  +     G  V  I AKG     +R   D + E+  +  G  GLA
Sbjct: 299 DATDLAAEAEFRVFKAV--AEAGNRVRGINAKGAADKYSRRLIDELTEFVSNDFGAKGLA 356

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +  ++ +  G +A   P+AK+         + R + + GD    +A      C      R
Sbjct: 357 W--FKCEADGKLA--SPIAKNFTEELLAKFKDRFEAEPGDLILIVADKFSVTCKALYALR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476
             +A EL + +     F WI++FP ++ +EE  +    H+PFT P+   +E L+ +D   
Sbjct: 413 KRLAAELKLYDPKQMHFSWIVEFPMFDHDEETDRWVAMHHPFTAPRPQDLEHLE-SDPGK 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
            +A  YDLV NG E   G +R H ++V  Q F  +G++ E  + RFG L  A Q G PPH
Sbjct: 472 CRAVAYDLVINGSEAGGGTMRIHDNKVQQQVFGLLGMTPEDAKERFGFLLDALQYGAPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA GIDR VML  G  N+R+   FP +Q   DL+  +P  V  +QL EL ++I+  P+
Sbjct: 532 GGIALGIDRWVMLFGGLDNIRDCIAFPKTQRAADLMTDAPGNVDRKQLDELAIKIL-RPE 590

Query: 597 KILK 600
           ++ K
Sbjct: 591 ELKK 594


>gi|224532521|ref|ZP_03673146.1| aspartate--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512593|gb|EEF82969.1| aspartate--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 586

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/591 (38%), Positives = 352/591 (59%), Gaps = 12/591 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+ N +    +IA+
Sbjct: 2   FKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVN-EEKLLKIAE 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + I GL++ R    INAN+ TG  E+ A+ IEI+S   ELP  +  +    E+
Sbjct: 61  KIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + +YR+LDLRRD+L   I+ R +  + +R  +I   F+E  TP    S+PEGARDF++P
Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++++I   +EN+L  +F+   N N +   F +I Y  A+ +YG+DKPD R  + + +++
Sbjct: 240 VKKENIFKLIENMLFLIFKNCININ-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
            +  +SEF +F   L      ++  +  K    +RA  + + E A+     GL   F ++
Sbjct: 299 RNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY--FTKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422
           +   N    G +AK L     E I+    +++ D  FF A +  +  C      R  IA 
Sbjct: 357 E---NNKFSGGIAKFLKTEEQELIKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIAN 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481
           +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+   + +L+ N   +I    
Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI- 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE +E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIV 582


>gi|157414294|ref|YP_001485160.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|166979992|sp|A8G7J3|SYD_PROM2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157388869|gb|ABV51574.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 598

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/605 (37%), Positives = 355/605 (58%), Gaps = 28/605 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R   C +L  +D+G  V L GWV R R HGG+IF+D+RDH G  Q+  NPD     F+ A
Sbjct: 2   RNKICKELNNTDIGKLVNLCGWVDRRRDHGGVIFIDLRDHSGFLQITINPDDGADLFKQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119
           +++R+E V+ + G++  R  ++IN N+ TG++EL  + +++L+ +   LP PV       
Sbjct: 62  ETLRNETVIMVSGIINERPKDSINTNLSTGELELKVKDLQVLNQIKNNLPFPVSIHDYEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLRR  L +N+  R +II   R  +    F E  TP+LT S+PEGARD
Sbjct: 122 TKEELRLKYRYLDLRRGKLLENLKTRHKIIKVSREFLDNFGFTEVETPLLTKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP+R++ G F+ALPQ+PQ +KQLLM  G D+Y+QIA CFRDED R+DR P EF QLD+
Sbjct: 182 FLVPARLSNGEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV +++I++  E++++ +++E  N N  +N F R+ +  A+  YGTD+PD R  +++
Sbjct: 241 EMSFVSEEEIISFNESLIKKIWKEVLNIN-FNNAFPRMSWQAAMDNYGTDRPDTRYEMLL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-----DRMNEWARSQGQP 354
            ++        F +F+K  ++  G  + +I  KGG  + +         + + A+  G  
Sbjct: 300 KDLGGVLGDIGFNIFTK--AIKAGGYIKSITVKGGNSSISNVRIKPGGDIFQVAQDAGAG 357

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GLA+I  + DE   +  +G +  +L+  +   I    + +DGD     AGD         
Sbjct: 358 GLAFIRVKGDE---LETIGAIKNNLSEEHIADILKITEAKDGDLILLGAGDKQIVNQSLD 414

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R +IA++L +I+ + + F W+ DFP +E NE+E + +  H+PF  P+    ++K  D 
Sbjct: 415 RVRQYIAKDLNLIDKSKWNFLWVTDFPMFERNEDENRYEALHHPFCSPK----NIKSKDS 470

Query: 475 LSIK-------AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
             ++       A  YDLV NG E+  G +R H + +  +    VG++ + ++ +FG L  
Sbjct: 471 DKMQKEIENSIANAYDLVLNGMELGGGSLRIHEANLQREVLKTVGLTDKEIDEKFGFLIE 530

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           A + G PPHGGIA G+DRI MLL+GA ++RE   FP +Q    LL  +PS VS  QL+EL
Sbjct: 531 ALEMGAPPHGGIAFGLDRITMLLIGADSIRETIAFPKNQQAKCLLTNAPSNVSESQLKEL 590

Query: 588 GLRIV 592
            + I 
Sbjct: 591 DIEIT 595


>gi|171912679|ref|ZP_02928149.1| aspartyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 601

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 240/603 (39%), Positives = 353/603 (58%), Gaps = 21/603 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACF 59
           YRTH C +L ++ VG  V LSGWV+  R  GG+IF+D+RD  G+TQ+V     NP++A  
Sbjct: 6   YRTHHCNELRLAHVGETVTLSGWVNSARDQGGVIFVDLRDREGVTQIVFRSEENPEAAA- 64

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             +  +R E VL I G V+ R   T N  + TG++EL    + +L+ A  LP  +  E  
Sbjct: 65  -ASHKLRDEDVLQITGKVVKRLEGTNNDKLATGEVELVVSSLTMLNKAAVLPFQLDKELS 123

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLRR  + +N+  R R+  + R  + A  F+E  TPIL+ S+PEGARD
Sbjct: 124 N-EDLRLKYRYLDLRRPRMTRNLRTRHRVTKATRDYLDAHGFVEVETPILSKSTPEGARD 182

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQYKQLLM +G +RYFQIA CFRDED R+DR P EF Q+D+
Sbjct: 183 FLVPSRLSPGKFYALPQAPQQYKQLLMVAGLERYFQIAKCFRDEDLRADRQP-EFTQVDI 241

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF  ++DI N +E +L+ +F+   +   +   F R+ + +A+ RYG DKPD R    +
Sbjct: 242 EMSFPTEEDIYNLVEGLLKDMFKAGRDVE-IPLPFPRMTWKEAMDRYGIDKPDTRFGNEI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQP--GL 356
            ++ + F  +EF++F  +L  + G  V AI AKG         +R+NE A   G P   L
Sbjct: 301 TDLGDIFTKTEFKIFRGVL--DGGGVVRAINAKGFASVTTGQMNRLNEIAIQAGLPVKTL 358

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I +   E+G      P+ +        A+  R+ +++GD  FF+AG     C+     
Sbjct: 359 AFIKY---ENGEYK--SPLWRFFTDEEKAALIERMKIEEGDIVFFVAGPWESTCTILGRV 413

Query: 417 RNHIAQELGIIN-CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDL 474
           R  +A+ +G     +   F W++DFP   ++EE+ K    H+PFT P+   +  L+    
Sbjct: 414 RLEVAEMMGTTKGSDALNFLWVVDFPLLAYSEEDAKWCAVHHPFTRPKTEDIPLLEEGKY 473

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YD+V NG E+  G +R H S++  + FS +G+S+E  +  F  +  AFQ G P
Sbjct: 474 SEVRAIAYDVVLNGCELGGGSLRIHESDLQAKMFSVLGVSEEEQKIMFSHILEAFQFGAP 533

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DRI+ML  G  ++REV  FP +    +L+  SPS    +QLRE+ ++    
Sbjct: 534 PHGGLALGLDRIIMLAAGEDSIREVIAFPKNNRGMELMTASPSPADFKQLREIYIQSTWK 593

Query: 595 PKK 597
            KK
Sbjct: 594 EKK 596


>gi|310778225|ref|YP_003966558.1| aspartyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747548|gb|ADO82210.1| aspartyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 591

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 234/600 (39%), Positives = 353/600 (58%), Gaps = 17/600 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           YRTH+ G+L   D+   V LSGWV   R  GG+ F+D+RD  G+TQ++ NP+  +   E 
Sbjct: 3   YRTHNLGELRKEDITKKVTLSGWVATKRDLGGLTFIDLRDREGVTQIIFNPEENADLAEK 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           ++ +R+E V+ I G V  R ++  N N+ TG IE+  +++EIL+  + LP  + GE    
Sbjct: 63  SQKIRTEAVIKITGEVRERYSK--NPNMPTGDIEVFVEELEILNNCDVLPFQISGEENLS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLR+  + +N+  R +++ ++R  M  + F++  TPILT S+PEGARDFL
Sbjct: 121 ENMRLKYRYLDLRKPKMTRNLKMRHKMLMAIRNYMDEKGFLDVDTPILTKSTPEGARDFL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR N+G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF QLD+EM
Sbjct: 181 VPSRTNEGDFYALPQSPQLFKQLLMISGVERYYQIAKCFRDEDLRADRQP-EFTQLDIEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE +D++N +E + + VF+  +        F R+ Y +A+ R+G+DKPD+R  + +  
Sbjct: 240 SFVEMEDVINEIEGLAKRVFQSVTE-EAADYEFQRMEYAEAMERFGSDKPDIRFGVELKE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQ-GQPGLAY 358
           +T+   +  F+ FS +   N G  V A+ A G   N  R       ++ ++  G  GLA+
Sbjct: 299 LTDIMKNCGFKAFSGV--ANSGGLVKAVVAPGSAENFSRKVLGEYEDYVKTYFGAKGLAW 356

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  ++ E G  +   P+AK  +      I  R     GD    +A             R 
Sbjct: 357 I--KVTEEGVNS---PIAKFFSEEEIATILARTGAVAGDVIMILADRAKVVYDGLGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLSI 477
            + ++L +IN + ++F WI+DFP +EW+EEE++    H+PFT +    M++    ++  +
Sbjct: 412 KLGKDLDLINNDEYKFLWIVDFPMFEWSEEEERYKAQHHPFTSIKAEDMDAFMTGEMDKV 471

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +   YDLV NG EI  G IR H  EV  + F  +G+S+E    +FG    AF+ G PPHG
Sbjct: 472 RTNSYDLVLNGAEIGGGSIRIHNPEVQAKVFERLGLSEEEAREKFGFFIDAFKYGAPPHG 531

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+A GIDR +M++L   ++R+V  FP +     L+  +PS V   QL EL L+    P K
Sbjct: 532 GLAFGIDRWLMVMLKESSIRDVIPFPKTNKGQCLMTEAPSKVEDGQLEELYLKSTYIPVK 591


>gi|293333828|ref|NP_001168737.1| hypothetical protein LOC100382529 [Zea mays]
 gi|223972717|gb|ACN30546.1| unknown [Zea mays]
          Length = 676

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/597 (38%), Positives = 342/597 (57%), Gaps = 25/597 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R   C +LG  D G  VRL GWV   R H G+ F+ +RD  G+ QV   P+    + I  
Sbjct: 86  RDALCSELGAGDAGRRVRLCGWVALRRAHAGLTFVTLRDRSGMVQVTVLPEYPEVYNIVN 145

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFG----ER 118
            +R E V+ ++G++  R  + INA++ TG IE+ A  + +L SV   LP PV      + 
Sbjct: 146 KLRVESVVAVEGVIRPRPVDAINADMRTGTIEVVAHHVLVLNSVTRSLPFPVTTSDTVKE 205

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGA 177
           ++PE IR ++R LDLRR  +  N+  R  ++  +R  +  E+ F+E  TP+L+ S+PEGA
Sbjct: 206 KFPEEIRLRFRVLDLRRPQMQSNLRLRHNVVKLIRRYLEDEHEFVEIETPVLSKSTPEGA 265

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV  G+FYALPQ+PQ +KQ+LM SGF++Y+QIA CFRDED R+DR P EF QL
Sbjct: 266 RDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQL 324

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DME++F   +D+L   E+++R VF+   +   + N F R+ Y +A+ RYGTD+PDLR   
Sbjct: 325 DMEVAFTSMEDMLKLNEDLMRHVFQAVGDIK-LPNPFPRLTYAEAMDRYGTDRPDLRFDW 383

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD------RMNEWARSQ 351
            + +V++ F+ S F+VF+  L      +   +P    GG   F +       +   A   
Sbjct: 384 ELKDVSDVFLGSSFKVFADTLESGGVIKALCVP----GGATVFSNTDLKKGTVYTEASKA 439

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GL   F ++ E+G + G+GP+   L     + +   LD + GD   F  G+      
Sbjct: 440 GAKGLP--FLKVMENGELEGIGPLLSSLKPEKKDQLMELLDTKTGDLILFALGEQSSANQ 497

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
                R  IA +L +I+ +     W+ DFP ++WN +E++ +  H+PFT P    E +  
Sbjct: 498 ILGRLRLFIAHKLEVIDTSAHSVLWVTDFPMFQWNSDEQRYEALHHPFTAPNP--EDM-- 553

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +DL S +A  YD++ NG EI  G +R + S+V  + F  +GIS E  E +FG L   F  
Sbjct: 554 DDLPSARALAYDMIYNGVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDM 613

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           G PPHGGIA G+DR+VMLL G  ++R+V  FP +      L  +PS V  +QL++L 
Sbjct: 614 GAPPHGGIAYGLDRLVMLLAGESSIRDVIAFPKTTTAQCALTKAPSAVEPQQLKDLA 670


>gi|254428816|ref|ZP_05042523.1| aspartyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196194985|gb|EDX89944.1| aspartyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 587

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 237/590 (40%), Positives = 349/590 (59%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CGDL  S  G  V L GWV R R HGG+IFLD+RD  G+ QVV +PD+   F +A 
Sbjct: 2   RSHYCGDLRASHDGETVELCGWVSRRRDHGGVIFLDLRDRNGLVQVVFDPDTVEAFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V  R     N+ + TG IE+  +++ IL+ AE  P  +       E 
Sbjct: 62  KVRSEYVVRLSGRVRMRDEAVRNSKMSTGDIEVLGKELTILNEAETPPFELDAHSAAGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR++DLRR  + +N   R+R+ + +R  +  E F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKYRYMDLRRPEVLRNFQFRSRLTHVVRAFLEGEGFMDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDLEASF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE++DI+   E ++R VF+E  +      +F R+ + +A++R+G+DKPDLR P+ + ++ 
Sbjct: 241 VEEEDIMGITERMVRSVFKELLDVEL--PDFPRMPFSEAMQRFGSDKPDLRIPLELIDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG   +R   D   ++    G  GLAYI   
Sbjct: 299 DLLAGVDFKVFSGPAN-DPKGRVAAMRVPGGCSLSRKDIDGYTKFVSIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+ K L     + I  R   + GD  FF A D  K  + A  A R  + 
Sbjct: 358 DLAAGAEGLQSPILKFLTEDAIKGILERTGAETGDLIFFGA-DKAKIVNEALGALRVKVG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L ++    +   W++DFP +E  E+E +    H+PFTMP    E LK N   ++ +  
Sbjct: 417 HDLNLVEGE-WAPLWVVDFPMFE--EDEGQYHALHHPFTMPSCSAEELKSNPAEAL-SRA 472

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H   +    F  +GIS E  + +FG L    + G PPHGG+A 
Sbjct: 473 YDMVLNGTELGGGSIRIHNPAMQRTVFEALGISDEEADEKFGFLLDGLKYGAPPHGGLAF 532

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VML+ G +++R+V  FP +Q     +  +PS V  +QLRE+G+++
Sbjct: 533 GLDRMVMLMTGCESIRDVIAFPKTQTAACTMTNAPSPVDNKQLREVGVQV 582


>gi|223940159|ref|ZP_03632021.1| aspartyl-tRNA synthetase [bacterium Ellin514]
 gi|223891176|gb|EEF57675.1| aspartyl-tRNA synthetase [bacterium Ellin514]
          Length = 601

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 239/606 (39%), Positives = 352/606 (58%), Gaps = 23/606 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61
           RTH C +L  + +G  V LSGWVH  R  GG+IF+DIRD  G TQ V +P       F+ 
Sbjct: 3   RTHHCNELRPAHIGQTVTLSGWVHSRRDLGGLIFIDIRDREGRTQTVFDPSDLPKDLFDR 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--- 118
           A S+RSE V+ + G V  R A T N  I TG++E+    +E+L++AE LP PV       
Sbjct: 63  AASLRSECVISVTGKVRQRPAGTNNPKIPTGEVEVGVTALEVLNMAEVLPFPVDDPEVAA 122

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E +R +YR+LDLRR  + +N+  R+++  + R  M  + F+E  TP L  S+PEGAR
Sbjct: 123 KVNEELRLQYRYLDLRRPEMARNLRLRSKVATATRVFMDEQGFLEVETPTLFKSTPEGAR 182

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVP+R   G+FYALPQ+PQQ+KQ+LM SG +RYFQ+A C+RDED R+DR P EF Q+D
Sbjct: 183 EFLVPNRREPGTFYALPQSPQQFKQILMVSGVERYFQLARCYRDEDLRADRQP-EFTQVD 241

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSF++++DI + +E +L+ V++   N + +   F RI +++A+ RYG DKPD R  + 
Sbjct: 242 IEMSFIDREDIYSLIEGLLKRVWKTALNMD-IPTPFKRISFEEALNRYGIDKPDTRIGME 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357
           + + TE F  S F+VFS   ++  G  V A+ AKG     +   + M E+A+S G  GLA
Sbjct: 301 LVDFTEEFRASTFKVFSG--AIANGGVVKALNAKGLADATQGQIETMTEYAKSFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +I     E  +     P+ K  N     A+  +L +++GD   F A   L  C      R
Sbjct: 359 FIKVEKGEWKS-----PIVKFFNEAEKVALTQKLGIEEGDLILFAADQWLTACEILGKIR 413

Query: 418 NHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
            + A          I  + F+F W+++FP   +++E+ +   +H+PFT P      L   
Sbjct: 414 LYCADVQKAKGKLTIPADRFDFLWVVEFPLLSFDKEQNRWYSSHHPFTAPVADDIPLLKT 473

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLYRAFQC 531
           D   ++   YD+V NG E+  G IR H  +V    F  V  I  E+V+ RFG +  AF+ 
Sbjct: 474 DPKKVRGQHYDVVVNGVELGGGSIRIHQPDVQKTIFEEVLQIPPEMVKARFGYMLEAFRY 533

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DR++ +L G  ++R+V  FP +    DL+  SP+ V  +QLR+L L +
Sbjct: 534 GAPPHGGIALGFDRLIAILCGTPSIRDVIAFPKTAKGTDLMTDSPAPVEPKQLRDLHLEL 593

Query: 592 VENPKK 597
            + PKK
Sbjct: 594 -KVPKK 598


>gi|295108483|emb|CBL22436.1| aspartyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 598

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/593 (40%), Positives = 351/593 (59%), Gaps = 14/593 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60
           +RT  C ++    VGS V L GWV + R  GGI+F+D+RD  GI Q++    N D A FE
Sbjct: 9   HRTCRCAEVTKEMVGSKVTLMGWVQKARNKGGIVFVDLRDRSGIMQLIFENGNIDEAGFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ + G V +R    +N N+ TG IEL A+ + IL+ ++  P P+    + 
Sbjct: 69  KAGKLRSEFVIAVTGTVENRGG-AVNENLATGAIELRAESLRILAESDVPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  L +NI+ ++++    R     E F+E  TP+L  S+PEGARD+
Sbjct: 128 KDEIRLKYRYLDLRRPDLQRNIMLKSKVAQLTRKFFTEEGFLEIETPMLGKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ GSFY LPQ+PQ YKQLLM SG+DRY QIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRIHPGSFYGLPQSPQLYKQLLMCSGYDRYIQIARCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E  L  +F+E  + + V     RI + +A+ R+G+DKPD+R  + +H
Sbjct: 247 LSFVDVDDVIDVNERFLAYLFKEVLDVD-VKLPIQRITWQEAMDRFGSDKPDMRFGMELH 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           +V+E      F VF   L    G  V  I A+G GG  R   D++ E+A+  G  GLAYI
Sbjct: 306 DVSEVVKDCGFGVFKSAL--ENGGSVRGINAEGQGGMPRKKIDKLVEFAKGYGAKGLAYI 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
               D +   +     AK +     +A+   ++ + GD   F A             R  
Sbjct: 364 AIAEDGTRKSS----FAKFMTDEEMDALVQAMEGKPGDLLLFAADKNKVIYDVLGALRVE 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
           +A+++ +++ N + F W+ +FP  EWNEEE +    H+PFTM     +  ++  DL  I+
Sbjct: 420 LAKQMDLLDKNEYRFVWVTEFPLLEWNEEENRYTAMHHPFTMLMDEDIPLIESGDLGKIR 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG EI  G +R H +++  + F  +G ++E    +FG L  AF+ G+PPH G
Sbjct: 480 AKAYDIVLNGNEIGGGSVRIHQNDIQEKMFEMLGFTREAAYEQFGFLLNAFKYGVPPHAG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR+VML+    ++R+V  FP  ++   L+  SPS VS +QL ELGL +
Sbjct: 540 LAYGLDRLVMLMAKVDSIRDVIAFPKVKDASCLMTESPSRVSEQQLEELGLEV 592


>gi|255507138|ref|ZP_05382777.1| aspartyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525587|emb|CBJ15065.1| aspartyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435147|gb|ADH17325.1| aspartyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438867|gb|ADH21020.1| aspartyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 582

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 240/595 (40%), Positives = 347/595 (58%), Gaps = 20/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSAC 58
           +YRTH C +L +  VG  VRLSGWVHR R HGG++F+D+RD +GITQ+V     NP+   
Sbjct: 2   KYRTHKCNELSLDHVGEHVRLSGWVHRYRNHGGVVFIDLRDCFGITQIVCRQEENPE--L 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            ++   VRSEWVLC++GLV +R     N N++TG IE+    +E+LS A+ LP  +  E 
Sbjct: 60  HQLMDQVRSEWVLCVEGLVCARLEGMENPNLVTGSIEVEVSSLEVLSRAQNLPFSISDEH 119

Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R  YR+LD+RR  +   ++ R +++ + R  +  + F E  TPIL  S+PEGA
Sbjct: 120 INVNEELRLTYRYLDMRRGDILDRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGA 179

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSR+  G+FYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+
Sbjct: 180 RDYLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFTQI 238

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF   +D+   +E ++  +F     G  +   FLR+ Y +A   YGTDKPDLR  +
Sbjct: 239 DMEMSFGGPEDLFPVVEELVTRLFA--VKGIELKAPFLRMTYQEAKDSYGTDKPDLRFGL 296

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + N  E+     F +F   L+     + + +P  G   +R   D   ++ +  G  GL 
Sbjct: 297 RLKNCCEYARKLTFSIFLDQLAYGGTVKGFCVPG-GADMSRKQLDIYTDFVKRYGAMGLV 355

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-A 416
              W   + G V+    VAK  +    + +      +D D    IA  P    + A D  
Sbjct: 356 ---WIKKQDGGVS--SNVAKFASEDVFQEMFEAFKAKDQDILLLIAA-PEAVANQALDHL 409

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  IA+E  + +   + F WI DFP +   +EE ++   H+PFT P     SL  +D  +
Sbjct: 410 RRLIAKERQLYDSTQYNFVWITDFPLF--AKEEGELCPEHHPFTAPLDEDISLLDSDPFA 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +++  YDLV NG+EIASG  R H  ++  + F+ + +S+E V+ +FG    A   G PPH
Sbjct: 468 VRSSSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFGFFIDALSFGTPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GIA G+DRI+M+L GA+ +REV  FP +Q   DL+M +PS +   QL+ELGL++
Sbjct: 528 LGIALGLDRIMMVLTGAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582


>gi|257885348|ref|ZP_05665001.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257821204|gb|EEV48334.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 589

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/592 (39%), Positives = 343/592 (57%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+     +EIA
Sbjct: 4   RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V  R    +N  + TG+ E+ A +I IL+ A+  P  +  ++   +
Sbjct: 64  DKCRSEYVIEVTGKVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KNI  R     ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E   G  V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEV-RGIEVTLPFPRMTYDEAMARYGSDKPDTRFDMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++     EF+VF   +++  G  V A+ AKG     +R   D++ ++    G  GLA++ 
Sbjct: 302 SDTVKEVEFKVFQ--MALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK +    TEAI    D + GD   F A       +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFMGEA-TEAIIKATDAKPGDLLMFGADKSEIVAAALGAIRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP+     L   D   + A 
Sbjct: 414 GKELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  +    +G +KE +E +FG L  A   G PPHGGIA
Sbjct: 474 AYDIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQMEEQFGFLLTALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR  MLL G  N+REV  FP +    D++  +PS VS  QL EL + + 
Sbjct: 534 LGLDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585


>gi|319956652|ref|YP_004167915.1| aspartate--tRNA(asn) ligase [Nitratifractor salsuginis DSM 16511]
 gi|319419056|gb|ADV46166.1| aspartate--tRNA(Asn) ligase [Nitratifractor salsuginis DSM 16511]
          Length = 592

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/601 (39%), Positives = 347/601 (57%), Gaps = 24/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH C ++    +G  V ++GWV   R HGG+IF+D+RD   I Q+V +P  +    +IA
Sbjct: 2   RTHYCEEITEDLIGQEVTVAGWVASRRDHGGVIFIDLRDKDEIVQLVCDPADSEEAHKIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR ++V+   G V  R     N N+ TG++E+   +++I + ++ +P  + G+    E
Sbjct: 62  DQVRDQYVIVATGKVRPRGEGLENPNLKTGKVEIVVSELKIENTSKPMPFDL-GDERVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLR   +HK    R++   + R  +    F+E  TP+LT S+PEGARD+LV
Sbjct: 121 EIRLKYRYLDLRTPKMHKIFRLRSQAAIAARNSLAEMGFMEVETPVLTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVWPGEFYALPQSPQLFKQLLMISGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +Q+ ++   E ++R ++        +   F R+ YD+A+ +YG+DKPDLR  + M +V
Sbjct: 240 FCDQEKVIEVAERLIRDIWAACDQWEKLPAQFPRMSYDEAMEKYGSDKPDLRFGLEMVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGLAY 358
            + F   +  +FS I        + A+  K   G+  F  R       + R  G  GL Y
Sbjct: 300 IDIFERCDNEIFSTIAKSPKKNRIKAL--KVPNGDNIFSKRQMKGFESYVRKFGAQGLGY 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
             +++ E G     GP+ K     + +AI  R D++ GD  FF AG+      +    R 
Sbjct: 358 --FQMKEEGL---KGPLTKFFTEEDLQAIIDRCDLKVGDVVFFGAGEKKVVLDYMGRFRL 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP----QGGMESLKGNDL 474
           ++A+ + II    F+F WI+DFP +E   EE K+   H+PFTMP    +GG++  +  DL
Sbjct: 413 YLAEIMEIIPEGEFKFVWIVDFPMFEV--EEGKLKALHHPFTMPKLNEKGGLDYEEIEDL 470

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
              K+  YDLV NG E+  G IR H  E+  + F  +GIS E  + +FG L  A + G P
Sbjct: 471 ---KSVAYDLVLNGTELGGGSIRIHKPEIQKEVFKLLGISDEEAKEKFGFLLEALEFGAP 527

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG A G DR++MLL G +++R+V  FP +Q    LL  +PS V  EQL+EL +R+ + 
Sbjct: 528 PHGGFAMGFDRMIMLLAGTESIRDVIAFPKTQRAQCLLTQAPSPVDPEQLKELHIRLRQR 587

Query: 595 P 595
           P
Sbjct: 588 P 588


>gi|256375853|ref|YP_003099513.1| aspartyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255920156|gb|ACU35667.1| aspartyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 592

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 244/598 (40%), Positives = 338/598 (56%), Gaps = 31/598 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+IF+D RD  G+ QVV   +    E A  
Sbjct: 3   RTHEAGTLRAEHAGQSVTLTGWVARRRDHGGVIFIDFRDASGVAQVVFR-EGEMAERAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+VL + G V  R   + N ++ TG IE+ A + E+L+ +  LP  +    E  E  
Sbjct: 62  LRSEFVLKVVGEVSRRPEGSENPDLPTGAIEVYASEFEVLNESAPLPFQLDEHLEVGEEA 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR    K +  R+      R  + +E F+E  TP LT S+PEGARDFLVP+
Sbjct: 122 RLRHRYLDLRRSGPAKAMRLRSEANRIAREVLHSERFVEVETPTLTRSTPEGARDFLVPA 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 182 RLRPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E ++  +++E  + + V+  F RI Y +A+ +YG+DKPDLR  + +  +TE
Sbjct: 241 EQDDVIALGEKIITALWKELGD-HDVAQPFRRISYAEAMAKYGSDKPDLRFGLELTELTE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 300 YFKDTPFRVFQAPY-------VGAVVMPGGASQPRRTLDAWQEWAKQRGAKGLAYVL--V 350

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPVAK+L     + +   +    GD  FF AGD     +    AR  IA  
Sbjct: 351 GEDGTLG--GPVAKNLTDAERDGLAKAVGANPGDCVFFGAGDVDGARALLGAARVEIANR 408

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEE--------EKKIDFAHNPFTMPQ----GGMESLKG 471
           +G+I    + F W++DFP +E  ++          K    H+ FT P        E+  G
Sbjct: 409 VGLIEEGSWSFVWVVDFPMFEAVDKIGDDVAVGSGKWTALHHAFTSPTPEWVDNFETDPG 468

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           N L    A+ YD+VCNG EI  G IR H ++V  +AF  +GI  E  + +FG L  AF+ 
Sbjct: 469 NAL----AYAYDIVCNGNEIGGGSIRIHRADVQQRAFDVMGIGAEEAQEKFGFLLDAFKF 524

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           G PPHGGIA G DRI MLL G  ++REV  FP S    D L  +P+ ++ +Q +E G+
Sbjct: 525 GAPPHGGIAFGWDRITMLLSGVDSIREVIAFPKSGGGYDPLTAAPAPITPQQRKEAGV 582


>gi|225869429|ref|YP_002745377.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|259511870|sp|C0MGD3|SYD_STRS7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225702705|emb|CAX00825.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 582

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 228/593 (38%), Positives = 351/593 (59%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++   
Sbjct: 3   RSMYAGHVRKEHIGRTIVLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEDVSGDVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++G V +R  +  N  + TG +EL    + IL+ A+  P  +    E  
Sbjct: 63  AERLRSEYVIEVEGSVEAR--QQANDKLATGAVELKVSGLTILNTAKTTPFEIKDGVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + ++   R +  + +R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLESFKLRAKTTHVIRNYLDNLGFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRISQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V ++ + G  V   F R+ YDDA+  YG+DKPD R  + + +
Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKD-TKGIEVKLPFPRMAYDDAMNHYGSDKPDTRFDMFLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +T+     +F+VFS+  +V       AI  KG     +R   D++ E+A+  G  GLA++
Sbjct: 299 LTDLVKEIDFKVFSEAQAVK------AIVVKGHADRYSRKDIDKLTEFAKQFGAKGLAWL 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
                +  + A  GP+AK L  V ++ +   L ++  D   F+A D L+  +    A R 
Sbjct: 353 -----KVADGAFTGPIAKFLTGVESK-LTESLQLEHNDLVLFVA-DTLEVANNTLGALRT 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+EL +I+ + F F W++D+P +EW+EEE++   AH+PFT+P          DL  ++
Sbjct: 406 RIAKELDMIDMSQFNFLWVVDWPMFEWSEEEERYMSAHHPFTLPTAESAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G + E    +FG L  A + G PPHGG
Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKDMQERMFRALGFTAEEANEQFGFLLEAMEYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR+VMLL G  N+REV  FP +    D +  +PS VS +QL EL L+I
Sbjct: 526 LAIGLDRLVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEKQLEELQLQI 578


>gi|320450610|ref|YP_004202706.1| aspartyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320150779|gb|ADW22157.1| aspartyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 581

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 246/594 (41%), Positives = 338/594 (56%), Gaps = 24/594 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    VG  V L GW++R R  GG+IFLD+RD  G+ Q+VA+P+S  ++ A+ 
Sbjct: 3   RTHFAGSLREEHVGEEVVLEGWINRRRDLGGLIFLDLRDREGLVQLVAHPESPAYKEAER 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGER----- 118
           VRSEWV+   G V  R     N  + TG +E++   +E+LS A   P PV  G R     
Sbjct: 63  VRSEWVVRARGTVRLRPEP--NPRLPTGAVEVALTSLEVLSEARTPPFPVDAGWRGEEEK 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  E +R KYR+LDLRR  + +N+  R R+I ++   +  E FI+  TP LT S+PEGAR
Sbjct: 121 EVSEELRLKYRYLDLRRRKMQENLRLRHRVIKAIWDFLDREGFIQVETPFLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP R   G FYALPQ+PQ +KQ+LM +GFDRYFQIA CFRDED R+DR P +F Q+D
Sbjct: 181 DFLVPYRQQPGLFYALPQSPQLFKQMLMVAGFDRYFQIARCFRDEDLRADRQP-DFTQMD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE +DIL   E ++  VF E + G  +   F R+ Y +A+ R+G+DKPD R  + 
Sbjct: 240 LEMSFVEVEDILELNERLMAHVFRE-ALGVELPLPFPRLTYQEAMERFGSDKPDTRFGLE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +  V   F  SEF+VF +   V       A+P      +R     + E A+  G  GLA 
Sbjct: 299 LKEVGYLFRESEFQVFREAERVK----ALAVPK---ALSRKEIADLEELAKRHGAKGLA- 350

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
            F R++E G   G   VAK L  +    +    +   GD+  F+AG      +     R 
Sbjct: 351 -FARVEEGGFTGG---VAKFLEPMQQSLLEA-TEATPGDTLLFVAGTAKVAATALGQVRL 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+ L +     F F W++DFP  EW+EE  +  + H+PFT P      L   D   ++
Sbjct: 406 KLAEVLDLPR-EGFRFLWVVDFPLLEWDEERGQYTYMHHPFTSPHPEDLPLLDTDPGKVR 464

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG E+  G IR H   +  + F  +GI +E    +FG    A   G PPHGG
Sbjct: 465 ALAYDLVLNGTEVGGGSIRIHDPALQARMFQVLGIGEEEQREKFGFFLEALTYGAPPHGG 524

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IA G+DR++ L+  + ++REV  FP ++   D L G+PS VS EQLRELGL ++
Sbjct: 525 IAWGLDRLLALMTASPSIREVIAFPKNKEGKDPLTGAPSPVSEEQLRELGLMVI 578


>gi|57167666|ref|ZP_00366806.1| aspartyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020788|gb|EAL57452.1| aspartyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 567

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 237/582 (40%), Positives = 341/582 (58%), Gaps = 22/582 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIAKSVRSEWVLCIDGLVM 78
           V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+ +    EIA   R+E+VL  +G + 
Sbjct: 2   VKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIASRTRNEFVLIAEGKIR 61

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREYPESIRFKYRFLDLRRD 136
            R     N  + TG+IE+   K   L +  E  +P FG  +    E +R KYRFLDLR  
Sbjct: 62  PRGEGLTNPKLKTGEIEVVVSK---LIIENESAVPPFGIGDESVNEELRLKYRFLDLRNP 118

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            L++N   R++   + R  +    F+E  TPILT ++PEGARD+LVPSRV+QG FYALPQ
Sbjct: 119 KLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLVPSRVHQGEFYALPQ 178

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMSF EQ D++ T E  
Sbjct: 179 SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMSFCEQKDVIATAETF 237

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           L+ +F+  + G  +   F ++ Y +A+  YG+DKPDLR  + + +V + F  S   +F+ 
Sbjct: 238 LKDIFK--ACGKEIQIPFRQMPYKEAMENYGSDKPDLRFDLKLIDVIDIFAKSNNEIFAN 295

Query: 317 ILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374
           I   +    V A+    G    ++    R  E+ R  G  GLA+I  ++ E G     GP
Sbjct: 296 IAKDSKKNRVKALRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFI--QVKEDG---LKGP 350

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
           + K  N  +   +  R +++ GD  FF AG       +    R  +A EL +IN +  EF
Sbjct: 351 LCKFFNEEDLNELIKRCELEVGDVVFFGAGVKKTVLDYMGRFRIFLAGELNLINPDALEF 410

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            W++DFP +E N ++      H+PFTMP+   E+    DL  I +  YD+V NG E+  G
Sbjct: 411 LWVVDFPMFEQN-DDGSYSAMHHPFTMPKNIDEA----DLEEISSIAYDVVLNGVELGGG 465

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            IR H +++  + F  + I +E  + +FG L  A   G PPHGGIA G+DR++ML+ GA 
Sbjct: 466 SIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIAIGLDRLIMLVTGAN 525

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 526 SIREVIAFPKTQRAQCLMTDAPSAASNETMRELGIKLRENIK 567


>gi|307610179|emb|CBW99730.1| aspartyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 580

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/575 (39%), Positives = 341/575 (59%), Gaps = 8/575 (1%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMS 79
           + + GWVH  R HGG+IFLDIRD  G+ QVV  P++   F IA+ +RSE+V+ + G+V  
Sbjct: 5   ITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAEKLRSEFVVRVTGIVRK 64

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
           R    IN  + TG++E+   ++EIL+ +   P      +   E +R+KYR++DLRR  + 
Sbjct: 65  RPEGMINDKMETGRVEVIGTQLEILNQSPTPPFLPDDHQIINEDLRYKYRYIDLRRAVMQ 124

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           K +  R ++ + +R  +  +NF++  TP+LT ++PEGARD+LVPSRV+ G FYALPQ+PQ
Sbjct: 125 KKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVPSRVHPGQFYALPQSPQ 184

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            +KQLLM SGFD+Y+QI  CFRDED R+DR P EF QLD+EM+F+ ++DIL  +E +L+ 
Sbjct: 185 LFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAFINEEDILQLIEGLLKI 243

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           VF+E  N  T+ +   R+ Y +A+ RYG+DKPDLRNP+ + ++ +     +F VF+   +
Sbjct: 244 VFKEILN-ITLPDKLPRMSYKEAMTRYGSDKPDLRNPLELIDIADLVKDCDFNVFASAAN 302

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM-GPVAKH 378
            N G  V      G   +R   D   ++    G  GLAYI    D S  +AG+  P+ K 
Sbjct: 303 DNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVN-DLSAGMAGLQSPILKF 361

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
           L+    ++I  R++ Q GD  FF A             RN +  +  +IN   ++  W++
Sbjct: 362 LSETAVQSILNRVEAQTGDVIFFGADKAHVVNESMGALRNKLGHDRNLINSG-WQLLWVV 420

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           D+P +E + +  K+   H+PFT PQ    E+L+     ++ A  YD+V NG+EI  G IR
Sbjct: 421 DWPMFELDPQSNKLQPMHHPFTSPQELSAETLRSKPTQTL-AKAYDIVINGYEIGGGSIR 479

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            H  E+    F  +GI ++    +FG L  A Q G PPHGGIA GIDR+ MLL  + ++R
Sbjct: 480 IHQPELQKTVFDLIGIDEQEAHEKFGFLLDALQYGAPPHGGIALGIDRLAMLLTDSTSIR 539

Query: 558 EVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +V  FP +Q     L  +PS     QL ELG+R+ 
Sbjct: 540 DVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLA 574


>gi|239999558|ref|ZP_04719482.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240014734|ref|ZP_04721647.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240017182|ref|ZP_04723722.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
 gi|240121257|ref|ZP_04734219.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
 gi|268595370|ref|ZP_06129537.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268548759|gb|EEZ44177.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|317164806|gb|ADV08347.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 602

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/598 (39%), Positives = 357/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +G  V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLGIAGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           +++GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGA-DKAKVVNEAVGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRL 592


>gi|240113392|ref|ZP_04727882.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240118546|ref|ZP_04732608.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|254494275|ref|ZP_05107446.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268599465|ref|ZP_06133632.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268604256|ref|ZP_06138423.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|226513315|gb|EEH62660.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268583596|gb|EEZ48272.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268588387|gb|EEZ53063.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 602

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/598 (39%), Positives = 357/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +G  V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLGITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           +++GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGA-DKAKVVNEAVGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRL 592


>gi|118474727|ref|YP_892354.1| aspartyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|166225333|sp|A0RQ71|SYD_CAMFF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|118413953|gb|ABK82373.1| aspartyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 584

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 239/591 (40%), Positives = 336/591 (56%), Gaps = 18/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           R+H C DL  +D+G  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P    +  EI 
Sbjct: 2   RSHYCTDLSSNDIGKKVQLCGWVNSYRDHGGVIFIDLRDRTGIIQLVCDPKDSKSAHEIG 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL   G + +R    IN  + TG+IE+   ++ I + +  LP  V G+    E
Sbjct: 62  SKVRDEYVLKATGTIRARGEGLINPKLKTGEIEVIVDELYIENESAALPF-VIGDPNVGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLDLR          R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 DIRLKYRFLDLRNTESFDKFKLRSKASIACRNALDRLGFLEVETPILTRATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+YFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVYPGSFYALPQSPQLFKQLLMCAGFDKYFQIARCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+D++   E +L+ +F  ++ G+ +   F R+ Y DA+  YG DKPDLR  + M +V
Sbjct: 240 FCTQEDVIKVGEEILKDIF--YACGHDIITPFRRMEYKDAMETYGNDKPDLRFDLPMVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +FS            AI   GG    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFAKSNNEIFSTPAQNIKKNRAKAIKVPGGDNIFSKRQMQRFEEFVRKFGAKGLAFI- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ E G     GP+ K       + +  R +++ GD  FF  GD      +    R  +
Sbjct: 357 -QVKEDGL---KGPLVKFFEQEQIDELIKRCELKVGDVVFFGIGDKKTVLDYMGRFRAFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ELGII+ N  EF W+++FP +E N ++      H+PFTMP    E     DL  I + 
Sbjct: 413 ANELGIIDENKLEFLWVVNFPMFEQN-DDGSYSAMHHPFTMPNNPDEE----DLEDITSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I +     +FG L  A   G PPHGG A
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLKIDEAEQREKFGFLLDALSFGAPPHGGFA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR++ML+  + ++R+V  FP +Q     +  +PS VS EQLRELGLR+
Sbjct: 528 IGLDRLIMLVTKSASIRDVIAFPKTQRASCPMTKAPSNVSNEQLRELGLRL 578


>gi|289207699|ref|YP_003459765.1| aspartyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943330|gb|ADC71029.1| aspartyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 594

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/592 (39%), Positives = 354/592 (59%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG +  +++ S V L GWV+R R HGG+IF+D+RDH G+ QVV +PD    F  A+
Sbjct: 2   RTHLCGRVTENELDSEVTLCGWVNRRRDHGGVIFVDLRDHAGLVQVVFDPDREEVFARAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+V+ + G V  R   T N ++ TG +E+   ++E+L+ A+  P P+  E +  E 
Sbjct: 62  QLRSEYVIRMTGRVRRRPEGTENPDLTTGAVEILGLELEVLNAAKTPPFPLDDE-DVGED 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR++DLRR  + + +  R ++  +MR  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 TRLRYRYMDLRRPVMQQRLRLRAQVTAAMRRFLETREFLDLETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF QLDMEM+F
Sbjct: 181 SRTHPGSFFALPQSPQLFKQLLMMSGMDRYYQITRCFRDEDLRADRQP-EFTQLDMEMAF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++ D+++  E ++R +F E   G  + + F R+ Y +A+ R+G+DKPDLR P+    +T
Sbjct: 240 VDEADVMDVTEGLIRHLFREV-QGVELPDPFPRMAYAEAMARFGSDKPDLRIPLEFTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           E     EF+VF+   + +P   V A+   GG    R   D   E+    G  GLAYI  +
Sbjct: 299 EVMQAVEFKVFNGPAN-DPEGRVAALRVPGGAKLTRKEIDVYTEYVGRYGAKGLAYI--K 355

Query: 363 LDESGNVAG--MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +++  ++ G    P+ K L    T  I  +     GD  FF A             R  +
Sbjct: 356 VNDPADLEGGLQSPILKFLPEDVTRQILEKTAAAAGDLIFFGADKASVVNEAIGALRVKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKA 479
             +L ++    ++  W++DFP +E+++ +K++   H+PFT P     ++L+ N   ++ +
Sbjct: 416 GHDLELVEAG-WQPLWVVDFPMFEYDDGDKRLYALHHPFTAPAVDSPDALRANPREAL-S 473

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H  E+   AF  +GI ++    +FG L  A + G PPHGG+
Sbjct: 474 RAYDMVLNGTEVGGGSIRIHNPEMQQAAFEALGIGEDEAREKFGFLLDALEFGAPPHGGL 533

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VML+ GA ++R+V  FP +Q    LL  +P+ V  +QLRELG+R+
Sbjct: 534 AFGLDRLVMLMSGAHSIRDVMAFPKTQTAACLLTDAPAPVGEKQLRELGIRL 585


>gi|293566141|ref|ZP_06678544.1| aspartyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291590067|gb|EFF21859.1| aspartyl-tRNA synthetase [Enterococcus faecium E1071]
          Length = 589

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/592 (39%), Positives = 343/592 (57%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+     +EIA
Sbjct: 4   RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V  R    +N  + TG+ E+ A +I IL+ A+  P  +  ++   +
Sbjct: 64  DKCRSEYVIEVTGEVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KNI  R     ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E   G  V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEV-RGIEVTMPFPRMTYDEAMARYGSDKPDTRFDMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++     EF+VF   +++  G  V A+ AKG     +R   D++ ++    G  GLA++ 
Sbjct: 302 SDTVKEVEFKVFQ--MALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK +    TEAI    D + GD   F A       +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFMGEA-TEAIIKATDAKPGDLLMFGADKSEIVAAALGAIRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP+     L   D   + A 
Sbjct: 414 GKELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  +    +G +KE +E +FG L  A   G PPHGGIA
Sbjct: 474 AYDIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQMEEQFGFLLTALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR  MLL G  N+REV  FP +    D++  +PS VS  QL EL + + 
Sbjct: 534 LGLDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585


>gi|329769593|ref|ZP_08260998.1| aspartyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328838545|gb|EGF88152.1| aspartyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 590

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 232/593 (39%), Positives = 355/593 (59%), Gaps = 15/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RT   G +    +G  V + GWV + R  G +IF+D+RD  GI Q V     ++   E+A
Sbjct: 6   RTEYAGHIDEKYIGKRVTVKGWVSKRRDLGNLIFIDVRDRMGIVQCVFSGEKNTEIHELA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++R+E+V+ I+G V++RS  T+N  I +G++E+ A K+EILS A+ LP  +       E
Sbjct: 66  STIRNEFVVSIEGEVVARSENTVNDKIPSGKVEIIADKLEILSKAKTLPFVLDDASLSSE 125

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  L + +  R++I  + R  +    F++  TPILT S+PEGARD+LV
Sbjct: 126 ELRLKYRYLDLRRTELAEVLQLRSKITKATRDYLDNNMFVDVETPILTKSTPEGARDYLV 185

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+Q+A CFRDED R+DR P +F Q+DMEMS
Sbjct: 186 PSRVHPGEFYALPQSPQLFKQLLMVAGFDRYYQVARCFRDEDLRADRQP-DFTQIDMEMS 244

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++IL  +E ++  V +E   G  V   F R+ Y++A+ R+G+DKPD R  + + +V
Sbjct: 245 FMSQEEILTMIEGLIAHVMKEV-KGIDVVLPFPRLDYEEAMERFGSDKPDTRFDMELKDV 303

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++   + +F+VFS   +V  G  V  I AKG     +R   D + ++  + G  GLA++ 
Sbjct: 304 SDLVKNLDFKVFSN--AVEQGGAVKCIVAKGCADKYSRKDIDALGKYVANYGAKGLAWV- 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
            ++ E G     G +AK       + +  R+D + GD   F A D  K C  +  A R  
Sbjct: 361 -KVTEEGL---NGAIAKFFTDEVAQELVTRVDAEVGDIILF-AADTKKVCYASLGALRQK 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A +L +I+ + + + W++++P  E++EE+ +   AH+PFTMP+     L         A
Sbjct: 416 LAADLDLIDKDKYNYLWVVNWPLLEYDEEKGRYSAAHHPFTMPKEEDVELLETAPEKAYA 475

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR +  E+    F  +G ++E  + +FG L  AF+ G+PPHGG 
Sbjct: 476 QAYDIVLNGYELGGGSIRIYDKEIQSSMFKALGFTEEQAQEQFGFLLDAFEYGVPPHGGC 535

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR VMLL G  N+R+   FP + N  D +  +PS V +EQL EL + ++
Sbjct: 536 ALGLDRFVMLLAGRDNLRDTIAFPKTANAADPMTQAPSPVDLEQLLELNISLL 588


>gi|300087788|ref|YP_003758310.1| aspartyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527521|gb|ADJ25989.1| aspartyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 598

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/596 (38%), Positives = 343/596 (57%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           ++H CG+L  + +  +V L+GWVHR R HG +IF+D+RD  GI QVV NP+ A     +A
Sbjct: 3   KSHQCGELTANHIDKYVTLAGWVHRRRDHGNLIFIDLRDSSGIVQVVFNPEKAEQAHHLA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++R+E+V+ + G V  R   T NA +ITG +E+ A  +EIL+ +   P  +  + +  E
Sbjct: 63  ETLRNEYVIKLAGAVSRRPEGTENARMITGLVEVMADSLEILNPSRTPPFYINEDADIDE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LDLRR  +  N+  R +IIN MR  + A  F+E  TP+L  S+PEGARD+LV
Sbjct: 123 SLRLKYRYLDLRRSRMAANLRLRHQIINHMRQYLDARGFLEVETPVLLKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FY+L Q+PQQ KQLLM +G ++Y+QIA CFRDED R+DR P EF QLD+EMS
Sbjct: 183 PSRVYPGKFYSLAQSPQQLKQLLMVAGVEKYYQIARCFRDEDLRADRQP-EFTQLDLEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++D++  +E +   + +  +    +   F R+ + D   R+G+DKPD+R  + +  +
Sbjct: 242 FVDEEDMMELLEGLFTSLVQTVTPEKKLIQPFPRLDFADITERFGSDKPDIRFGMELTEI 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           T+    S F VFS   +   G  + AI A G GG N+   + + + ++  G  GL  I  
Sbjct: 302 TDIVRDSSFGVFSG--TAAKGGVIKAINAPGCGGYNKKQLEELIDKSKQAGAAGLVPISL 359

Query: 362 RLDESGNVAGM------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
              E G++  +         AK+L       I  RL  + GD    +A            
Sbjct: 360 GA-EPGDIEALTFEQVKSVAAKYLTFEQISEIARRLSAKPGDLLLVVADRREVVNHVLGV 418

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  +   L + + N   F ++  FP + W+EEEK+    H+PFT P+     L  +D  
Sbjct: 419 LRAELGSRLDLADPNELVFAFVTGFPLFTWDEEEKRWQATHHPFTSPRETDLPLLESDPG 478

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           S+    YDL+ NG+EIA G IR H   +  + F  +G S+E +++ FG L  AF+ G PP
Sbjct: 479 SVHGRHYDLILNGYEIAGGSIRIHRPGLQRRVFEILGHSEERIQSLFGQLLDAFEYGAPP 538

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG+A GIDR+V +L G   +REV  FP +Q   D + GSPS VS  QL ++ + +
Sbjct: 539 HGGVAPGIDRVVAILAGEPTIREVIAFPKNQAGIDPMFGSPSEVSRSQLDQVHISL 594


>gi|304312893|ref|YP_003812491.1| Aspartyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301798626|emb|CBL46858.1| Aspartyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 588

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/594 (39%), Positives = 345/594 (58%), Gaps = 12/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  + +   V L GWVHR R HGG+IF D+RD  G+ QVV +PD+   F  A+
Sbjct: 2   RSHYCGHLNSTHIDQQVTLCGWVHRRRDHGGVIFFDLRDREGVAQVVFDPDTVEAFATAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL I G V +R   T+NA + TG+IE+  + IEIL+ +E  P  +       E 
Sbjct: 62  RVRSEYVLKITGRVRARPEGTVNATMATGEIEVLGKSIEILNTSETPPFQLDEYGNVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR+LDLRR  +   ++ R ++ ++MR  +    FI+  TPILT ++PEGARD+LVP
Sbjct: 122 VRLRYRYLDLRRPEMQAKLLFRAKVTSTMRRYLDEHGFIDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR   GSF+ALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYPGSFFALPQSPQLFKQLLMVAGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + QD+I+  +E + R +F+E            R+ + +A+ R+G+DKPDLR P+ +  ++
Sbjct: 241 LTQDEIMGIVEGMFRNLFKEVLGVEIPP--LRRMPFSEAMARFGSDKPDLRIPLELVEIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361
           +     E R+F+   + +P   + A+   GG    +R   D   ++    G  GLAYI  
Sbjct: 299 DLMTSVESRIFAGPAN-DPKCRIAALRLPGGAARLSRKDIDNYTQFVGIYGAKGLAYIKV 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G      P+ K L     E I  R+   DGD  FF A D  K  S A  A R  +
Sbjct: 358 NDLTQGREGLQSPILKFLPDDVVEGIMKRVHAADGDLVFFGA-DKAKIVSDALGALRVKL 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +LG++    +E  W++DFP +E  +        H+PFT P    ES+  N   ++ + 
Sbjct: 417 GHDLGLVQGE-WEALWVVDFPMFEETDTGGWTAL-HHPFTSPSCSPESMLENPGAAL-SR 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H  ++    F+ +GIS E  + +FG L  A + G PPHGG+A
Sbjct: 474 AYDLVLNGVELGGGSIRIHQQDMQKAVFNLLGISTEDAQEKFGFLLDALKFGAPPHGGLA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+VML+ G+  +R+V  FP +Q    ++  +P+ V  +QLRE+G+R+ E 
Sbjct: 534 FGLDRLVMLMTGSPTIRDVIAFPKTQTAACVMTQAPAPVDAKQLREVGIRLREK 587


>gi|225548085|ref|ZP_03769370.1| hypothetical protein RUMHYD_00064 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040761|gb|EEG51007.1| hypothetical protein RUMHYD_00064 [Blautia hydrogenotrophica DSM
           10507]
          Length = 599

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 240/595 (40%), Positives = 352/595 (59%), Gaps = 13/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60
           +R+H C ++     GS V L GWV + R  GGI+F+D+RD  G+ Q++    + D + FE
Sbjct: 9   HRSHRCAEVTKEMTGSEVTLMGWVQKSRNKGGIVFVDLRDRSGLIQLIFENGSIDESGFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ + G V +RS   +N N++TG+IE+  +++ ILS AE  P P+    + 
Sbjct: 69  KAGKLRSEFVIAVVGTVEARSG-AVNPNMLTGEIEIRVRELRILSEAETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  L +N++ R+++    R     E F+E  TP+LT S+PEGARD+
Sbjct: 128 KDEVRLKYRYLDLRRPDLQRNLMLRSQVATLTRQFFAQEGFLEIETPMLTKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QGSFYALPQ+PQ +KQLLM SG+DRY QIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHQGSFYALPQSPQIFKQLLMCSGYDRYIQIARCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+L+  E  L  +F+E   G  VS    RI + +A+ R+G+DKPD+R  + + 
Sbjct: 247 LSFVDVDDVLDVNERFLAFLFKEVL-GVEVSLPIQRITWQEAMDRFGSDKPDMRFGMELQ 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           +V+E     EF VF   L    G  V  I AKG G   R   D++ E+A+  G  GLAY+
Sbjct: 306 DVSEVVKDCEFAVFKGAL--ENGGSVRGINAKGQGKMPRKKIDKLVEFAKGYGAKGLAYL 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              ++E G        AK +       +   +  + GD   F A             R  
Sbjct: 364 --AVNEDGTYK--SSFAKFMTEEEMGGLVKAMKGEPGDLLLFAADKNKLVYDVLGALRLE 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +++ +++ N F F W+ +FP  EW+EEE++    H+PFTM       L   +   ++A
Sbjct: 420 LGRQMELMDKNEFRFVWVTEFPLLEWSEEEERYTAMHHPFTMLMDEDLPLLDTEPGKVRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G +R   ++V  + F  +G +KE    +FG L  AF+ G+PPH G+
Sbjct: 480 KAYDIVLNGNEIGGGSVRIFQNDVQERMFEVLGFTKEAAYEQFGFLLNAFKYGVPPHAGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR+VML+ GA ++REV  FP  ++   L+  +PS VS  QL EL L+I + 
Sbjct: 540 AYGLDRLVMLMAGADSIREVIAFPKVKDASCLMSEAPSAVSEAQLEELALKIAKE 594


>gi|69247937|ref|ZP_00604553.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Enterococcus
           faecium DO]
 gi|257880301|ref|ZP_05659954.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257882156|ref|ZP_05661809.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257890960|ref|ZP_05670613.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894215|ref|ZP_05673868.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258614751|ref|ZP_05712521.1| aspartyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260562395|ref|ZP_05832909.1| aspartyl-tRNA synthetase bacterial [Enterococcus faecium C68]
 gi|261209230|ref|ZP_05923622.1| aspartyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289566146|ref|ZP_06446581.1| aspartyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293552797|ref|ZP_06673457.1| aspartyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|293560707|ref|ZP_06677186.1| aspartyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|294614201|ref|ZP_06694121.1| aspartyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294622237|ref|ZP_06701297.1| aspartyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314938574|ref|ZP_07845858.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314940919|ref|ZP_07847825.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314952055|ref|ZP_07855078.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314991937|ref|ZP_07857392.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314995195|ref|ZP_07860309.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68194639|gb|EAN09126.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Enterococcus
           faecium DO]
 gi|257814529|gb|EEV43287.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257817814|gb|EEV45142.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257827320|gb|EEV53946.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830594|gb|EEV57201.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260073319|gb|EEW61660.1| aspartyl-tRNA synthetase bacterial [Enterococcus faecium C68]
 gi|260076776|gb|EEW64511.1| aspartyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289162091|gb|EFD09956.1| aspartyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291592977|gb|EFF24566.1| aspartyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291598279|gb|EFF29372.1| aspartyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291603044|gb|EFF33236.1| aspartyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291605298|gb|EFF34753.1| aspartyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313590604|gb|EFR69449.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313593521|gb|EFR72366.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313595845|gb|EFR74690.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313600277|gb|EFR79120.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313642131|gb|EFS06711.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133a04]
          Length = 589

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/592 (39%), Positives = 343/592 (57%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+     +EIA
Sbjct: 4   RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V  R    +N  + TG+ E+ A +I IL+ A+  P  +  ++   +
Sbjct: 64  DKCRSEYVIEVTGEVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KNI  R     ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E   G  V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEV-RGIEVTLPFPRMTYDEAMARYGSDKPDTRFDMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++     EF+VF   +++  G  V A+ AKG     +R   D++ ++    G  GLA++ 
Sbjct: 302 SDTVKEVEFKVFQ--MALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK +    TEAI    D + GD   F A       +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFMGEA-TEAIIKATDAKPGDLLMFGADKSEIVAAALGAIRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP+     L   D   + A 
Sbjct: 414 GKELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  +    +G +KE +E +FG L  A   G PPHGGIA
Sbjct: 474 AYDIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQMEEQFGFLLTALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR  MLL G  N+REV  FP +    D++  +PS VS  QL EL + + 
Sbjct: 534 LGLDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585


>gi|16800622|ref|NP_470890.1| aspartyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|24212412|sp|Q92BJ4|SYD_LISIN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|16414041|emb|CAC96785.1| aspartyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 591

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/594 (39%), Positives = 340/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTSYCGELNETHIGQSVILHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGKVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I    E++L  V +E  N  T+   F R+ Y +A+ R+G+DKPD+R  + + NV
Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           +E     +F+VF    ++  G EV AI AK    N  R   D +  +  + G  GLA   
Sbjct: 302 SEVVKDVDFKVFQS--AIENGGEVKAINAKAAATNFSRKDLDALGVFVANYGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E+G +   GP+AK         ++  L  +DGD   F A       +     RN +
Sbjct: 357 WLKIEAGELK--GPIAKFFPEDKAAELQAALQAEDGDLLLFAADKADIVAASLGALRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L +IN +   F W+ D+P +E++EE  +   AH+PFT+P+         D   + A 
Sbjct: 415 GKDLDLINEDELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPFLETDSSKVMAE 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA
Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMEALEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+ 
Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSAAQLAELKLETVKK 588


>gi|293398532|ref|ZP_06642710.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|291611003|gb|EFF40100.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 602

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/598 (39%), Positives = 357/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +G  V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLGIAGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           +++GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGA-DKAKVVNEAVGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQGKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRL 592


>gi|296139671|ref|YP_003646914.1| aspartyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296027805|gb|ADG78575.1| aspartyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 601

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 241/596 (40%), Positives = 337/596 (56%), Gaps = 28/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L   D G+ V L+GWV R R HGG+IF+D+RD  G+ QVV   +SA  E A  
Sbjct: 3   RTHLAGSLRAEDAGTVVTLTGWVARRRDHGGVIFIDLRDSSGVAQVVFR-ESAVAEQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + + G V  R   + N N+ +G IE++   + +L+  E  PLP   + E  E  
Sbjct: 62  LRSEYCVLVTGTVEKRPEGSENPNLPSGAIEVNVTDLTVLN--ESAPLPFQLDEEPGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+     I  R++     R  +   +F E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRREGPAAAIKLRSQANAVARNILALNDFTEIETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 180 RLRPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +Q+D++   E +++ ++     G+ +     R+ Y +A+RR+G+DKPDLR  + +   TE
Sbjct: 239 DQEDVIALGEQIVKALWSLI--GHEIPTPIPRLTYAEAMRRFGSDKPDLRFGLELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 297 YFSGTPFRVFQAPY-------VGAVVMPGGASQPRRQLDAWQEWAKQRGARGLAYVL--I 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPVAK+L+      +   +  Q GD  FF AG      +    AR  IA +
Sbjct: 348 GEDGEL--TGPVAKNLSDDERAGLAAHVGAQPGDCVFFAAGPTKTMRALLGAARGEIADK 405

Query: 424 LGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLKGND 473
           LG+I    + F W++D P +E  ++     D A         H+ FT P+         D
Sbjct: 406 LGLIKDGDWAFTWVVDAPLFEPADDATASGDVAVGDGAWTAVHHAFTSPKPESIDTFDTD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  A+ YD+VCNG EI  G IR H  +V  + F+ +GI +E    +FG L  AF  G 
Sbjct: 466 PGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFAIMGIDEEQAREKFGFLLDAFSYGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGGIA G DR+V LL GA ++REV  FP S    D L  +P+ ++ +Q RE G+
Sbjct: 526 PPHGGIAFGWDRVVSLLAGAPSIREVIAFPKSGGGVDPLTDAPAAITAQQRRESGM 581


>gi|256823083|ref|YP_003147046.1| aspartyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796622|gb|ACV27278.1| aspartyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 590

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 241/604 (39%), Positives = 360/604 (59%), Gaps = 27/604 (4%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEI 61
           + R+H CG+L  ++V   V LSGWVHR R  GG+IFL +RD  G+ QVV +PD    F  
Sbjct: 4   KMRSHYCGELSKNEVNQSVTLSGWVHRRRDLGGLIFLQVRDRSGLIQVVIDPDFKELFAT 63

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +R+E+V+ + G V +R  E +N N+ TG+IE+ AQ++ IL+ A+   +P+    E  
Sbjct: 64  AEQLRNEFVIQVKGQVRARPDEMVNKNMTTGEIEVLAQELTILNKAQPPAIPIDENLEAS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR  + +N++ R ++ ++MR  M    FI+  TPILT ++PEGARD+L
Sbjct: 124 EEQRLKYRYLDLRRPEMAQNMIFRHKVTSAMRRYMDEHGFIDVETPILTKATPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF QLD+E 
Sbjct: 184 VPSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQLDIET 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++Q++++  ME ++R +F+E       +  F R+ Y +A+ RYG+DKPDLR  + +  
Sbjct: 243 SFLDQEEVMQLMEGLIRHLFQELMAIELPA--FPRMSYAEAMERYGSDKPDLRTDMELVT 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V E     EF+VF+   + +    V A+   GG   +R   D    +    G  GLA++ 
Sbjct: 301 VDEIVKDVEFKVFAGP-AKDEQSRVAALRVSGGAKLSRKQIDEYTNFVGIYGAKGLAWM- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
            +++  G      P+ K L      AI  ++  Q+GD  FF   D  +  + A  A R  
Sbjct: 359 -KVNGQGAENLQSPILKFLGDDKALAIVEKVGAQEGDIIFF-GSDTKRVVADAMGALRLK 416

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A +L +I  + ++  W++DFP +E  E + +I   H+PFT P       K ND  ++KA
Sbjct: 417 VAADLELIR-DEWKPLWVVDFPMFE--EIDGEIHALHHPFTAP-------KDNDAAAVKA 466

Query: 480 -------FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                    YD+V NG E+  G IR H  ++    F  +GI +   + +FG L  A + G
Sbjct: 467 NPTETLSKAYDMVLNGSEVGGGSIRIHNQDMQETVFDILGIDETEQKEKFGFLLDALKFG 526

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG+A G+DR+VML++GA ++R+V  FP +      L  +PS V  +QL ELG+++ 
Sbjct: 527 CPPHGGLAFGLDRLVMLMVGADSIRDVIAFPKTTTASCPLTQAPSVVEEKQLDELGIQVK 586

Query: 593 ENPK 596
           +  K
Sbjct: 587 KKEK 590


>gi|269218547|ref|ZP_06162401.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211658|gb|EEZ77998.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 595

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/593 (40%), Positives = 339/593 (57%), Gaps = 30/593 (5%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G L   D+GS V L+GWV R R HGGI F+D+RD  GI QV         E+A  +R+E
Sbjct: 2   AGSLRSEDIGSSVTLTGWVDRRRDHGGIAFIDLRDASGIVQVTVRE-----EVAHELRNE 56

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGEREYPESIRF 126
           + L + G+V  R     NA + TG+IE+ A  + +L+ +  LP  V    + +  E  R 
Sbjct: 57  YCLQVVGVVRERPDGNANAALSTGEIEVEAADVVVLNPSAALPFQVSEHADEQAGEEARL 116

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           KYR+LDLRR  + + I  R+    + R  +   +F+E  TP LT S+PEGARDFLVP+R+
Sbjct: 117 KYRYLDLRRAPMQRAIRLRSEASQAARKVLHGHDFVEVETPTLTRSTPEGARDFLVPARL 176

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           N GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV+Q
Sbjct: 177 NPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFVDQ 235

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           DD++   E+VLR ++     G  +     RI Y DA+ RYG+DKPDLR  + + N+TE+F
Sbjct: 236 DDVIAVAEDVLRELWALI--GYDLEKPIPRITYADAMERYGSDKPDLRFGLELVNLTEYF 293

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366
            ++ FRVF      NP      +P       RAF D+  EWA+++G  GLAY+   + E 
Sbjct: 294 ENTPFRVFQ-----NPYVGAVVMPGGASQPRRAF-DKWQEWAKARGAKGLAYV--TIAED 345

Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426
           G +   GPVAK+++      +  ++  + GD  FF AG P++       AR  I +  G+
Sbjct: 346 GQLG--GPVAKNISEAERAGLAEKVGAKPGDCVFFAAGSPIEARELLGAARLEIGKRCGL 403

Query: 427 INCNCFEFCWIMDFPFYEWN---EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK----- 478
           I+   + F W++D P ++ +     E  +   H+ +T       S K   L S       
Sbjct: 404 IDPKAWAFTWVVDAPLFKPSGAAAAEGDVALGHSAWTAVHHAFTSPKPECLDSFDVDPEN 463

Query: 479 --AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A+ YD+VCNG EI  G IR H  +V  + F  +GIS    + +FG L  AF+ G PPH
Sbjct: 464 ALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGISAAEAQEKFGFLLDAFKFGAPPH 523

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           GGIA G DRIV LL  A ++R+V  FP      D L  +P+ ++ +Q +E G+
Sbjct: 524 GGIAFGWDRIVSLLTDAPSIRDVIAFPKIGAGWDPLTDAPAPITAQQRKEAGV 576


>gi|291300018|ref|YP_003511296.1| aspartyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290569238|gb|ADD42203.1| aspartyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 1019

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 234/588 (39%), Positives = 347/588 (59%), Gaps = 12/588 (2%)

Query: 4    YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
            YRT++ G++  +D+   V L+GWV R R HGG+ F+D+RD  G+ QVV   D    E+AK
Sbjct: 432  YRTYNAGEIRATDIEYPVCLAGWVARRRDHGGVEFIDLRDASGVVQVVFR-DGEAAELAK 490

Query: 64   SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             +R E+ + ++G+V  R     N ++ TG+IE+ A K+ ILS A  LPLP+    E  E 
Sbjct: 491  ELRDEFCVQVNGVVARRPEGNENPDLPTGEIEIVADKLTILSRAAALPLPIDDHLEVGED 550

Query: 124  IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            +R K+R+LDLRR      +  R+      R  +  E F+E  TP LT S+PEGARDFLVP
Sbjct: 551  VRLKHRYLDLRRTGPATALRLRSEANRIARNLLHDEGFVEIETPTLTRSTPEGARDFLVP 610

Query: 184  SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
             R+  G++YALPQ+PQ +KQLLM SGF+RY+QIA C+RDED R+DR P EF QLD+E SF
Sbjct: 611  VRLQPGTWYALPQSPQLFKQLLMVSGFERYYQIARCYRDEDFRADRQP-EFTQLDIEASF 669

Query: 244  VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            V +DD++   E ++  ++++ + G  +      I + DA+RRYG+DKPDLR  + + +++
Sbjct: 670  VTEDDVIKLGEKIVAALWKDLA-GYELPGPIPLITWHDAMRRYGSDKPDLRFGVELVDLS 728

Query: 304  EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
             +   +EFRVFS  L+   G  V A+   GG    R   D   +WA+++G  GLAY+ + 
Sbjct: 729  TYLKGTEFRVFSGALAA--GGHVGAVVMPGGASQTRKELDGWQDWAKARGARGLAYVLFD 786

Query: 363  LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIA 421
              E+G     GPVAK+L+  +   +   +  + GD+ FF A  D +        AR  I 
Sbjct: 787  A-ETGEP--RGPVAKNLSEEHLSGLATAVGAKPGDAVFFAASTDTIDAQELLGAARLEIG 843

Query: 422  QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +  G+I+ + + FCW++D P +   + ++     H+PFT P         ++     A+ 
Sbjct: 844  RRCGLIDTDEWAFCWVVDAPMF--GKTDEGWTSLHHPFTSPNSDWARSFQDNPGEALAYA 901

Query: 482  YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
            YD+VCNG EI  G IR H  +   + F  +GI +    ++FG L  AF+ G PPHGGIA 
Sbjct: 902  YDIVCNGNEIGGGSIRIHDGDTQRKVFDVLGIDEAEAADKFGFLLEAFKYGPPPHGGIAF 961

Query: 542  GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            G DRI  LL  A ++REV  FP S+   D L G+P+T++ +Q +E G+
Sbjct: 962  GWDRICALLSKADSIREVIAFPKSRGGHDPLTGAPTTITAQQRKEAGV 1009


>gi|161511079|ref|NP_212580.2| aspartyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|195942026|ref|ZP_03087408.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 80a]
 gi|218249506|ref|YP_002374958.1| aspartyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|223888743|ref|ZP_03623334.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|226321756|ref|ZP_03797282.1| aspartyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|6920080|sp|O51402|SYD_BORBU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226736530|sp|B7J213|SYD_BORBZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218164694|gb|ACK74755.1| aspartyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|223885559|gb|EEF56658.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|226232945|gb|EEH31698.1| aspartyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 586

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/592 (38%), Positives = 351/592 (59%), Gaps = 12/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+ N +    +IA+
Sbjct: 2   FKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVN-EEKLLKIAE 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + I GL++ R    INAN+ TG  E+ A+ IEI+S   ELP  +  +    E+
Sbjct: 61  KIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + +YR+LDLRRD+L   I+ R +  + +R  +I   F+E  TP    S+PEGARDF++P
Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++++I   +EN+L  +F+   N N +   F +I Y  A+ +YG+DKPD R  + + +++
Sbjct: 240 VKKENIFKLIENMLFLIFKNCININ-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
            +  +SEF +F   L      ++  +  K    +RA  + + E A+     GL   F ++
Sbjct: 299 RNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY--FTKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422
           +   N    G +AK L     E I+    +++ D  FF A +  +  C      R  IA 
Sbjct: 357 E---NNKFSGGIAKFLKTEEQELIKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIAN 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481
           +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+   + +L+ N   +I    
Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI- 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F  +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFKIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV+
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583


>gi|169350230|ref|ZP_02867168.1| hypothetical protein CLOSPI_00974 [Clostridium spiroforme DSM 1552]
 gi|169293013|gb|EDS75146.1| hypothetical protein CLOSPI_00974 [Clostridium spiroforme DSM 1552]
          Length = 583

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 228/593 (38%), Positives = 348/593 (58%), Gaps = 16/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L +SDV   V L GWV + R  G ++F+D+RD +GITQ+V N +     +AK 
Sbjct: 3   RTHNNGELRISDVNKIVELKGWVAKKRNLGSLVFIDLRDRHGITQIVLNEEMEA--LAKD 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +++E+V+ + G V+ RS++  N N+ TG IE+ A +I+I++ A+  P+    + +  E  
Sbjct: 61  IKNEYVIHVVGKVIERSSK--NPNMPTGDIEIEASQIDIINTAKVTPIYTSDDTDASEDA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR  +   I+ R +I  S+R  +   +FI+  TP L  S+PEGARDFLVPS
Sbjct: 119 RMQYRYLDLRRPVMQNKIITRHKITRSIRDFLDNHDFIDIETPYLNRSTPEGARDFLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ GSFYALPQ+PQ +KQLLM SGF+RY+QIA CFRDED R DR P EF Q+D+EMSF+
Sbjct: 179 RVHNGSFYALPQSPQLFKQLLMVSGFERYYQIARCFRDEDLRLDRQP-EFTQVDVEMSFM 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             D+I+   E ++  V  +   G  +     R+ + +A+ +YG DKPD+R  + + N+ E
Sbjct: 238 TTDEIITLGEQLIAKVMNDVK-GIDLKLPLPRMTWHEAMEKYGIDKPDIRFGLELVNLNE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIFWR 362
                +F VF   L  N G+ V  I  KG   N  R   D++ +  ++    GLA++   
Sbjct: 297 VVKDVDFMVFKSALEAN-GH-VKGINVKGEANNFSRKAIDKLTDIVKTYKAKGLAWL--- 351

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADARNHIA 421
             +  +    GP+AK  +      +   +D  DGD   F++       C   A  RNH+ 
Sbjct: 352 --KVKDGKAEGPIAKFFSDEQMIRLLTAMDASDGDLLLFVSDAKYNVVCDALAALRNHLG 409

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL +   + + F W++DFP +E++EE K+    H+PFT P+        ND  +  A  
Sbjct: 410 KELKLYRQDEYAFLWVVDFPMFEYDEETKRYYAVHHPFTRPKDSDLDKIENDPANCLADA 469

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NGFE+  G  R +  E+  +AF  +G ++E + ++FG    AFQ G PPHGG A 
Sbjct: 470 YDIVLNGFELGGGSQRIYEQELQERAFRALGFTQERINSQFGWFVEAFQYGTPPHGGFAL 529

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR+ M+L  ++N+REV  FP + +    +  +P  V  EQL EL + ++E+
Sbjct: 530 GLDRLAMILTNSENIREVIAFPKNASAVCPMSKAPGKVDKEQLDELKIAVIED 582


>gi|225871427|ref|YP_002747374.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|254781752|sp|C0MB16|SYD_STRE4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225700831|emb|CAW95543.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 582

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 228/593 (38%), Positives = 352/593 (59%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++   
Sbjct: 3   RSMYAGHVRKEHIGRTIVLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEDVSGDVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ ++G V +R  +  N  + TG +EL    + IL+ A+  P  +    E  
Sbjct: 63  AERLRSEYVIEVEGSVEAR--QQANDKLATGAVELKVSGLTILNTAKTTPFEIKDGVEVS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + ++   R +  + +R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRLRYRYLDLRRPEMLESFKLRAKTTHVIRNYLDNLGFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRISQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I + +E ++  V ++ + G  V   F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEQEIQDIVEGMIAKVMKD-TKGIEVKLPFPRMAYDDAMNHYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           +T+     +F+VFS+  +V       AI  KG     +R   D++ E+A+  G  GLA++
Sbjct: 299 LTDLVKEIDFKVFSEAQAVK------AIVVKGHADRYSRKDIDKLTEFAKQFGAKGLAWL 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
                +  + A  GP+AK L  V ++ +   L ++  D   F+A D L+  +    A R 
Sbjct: 353 -----KVVDGAFTGPIAKFLTGVKSK-LTESLQLEHNDLVLFVA-DTLEVANNTLGALRT 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+EL +I+ + F F W++D+P +EW+EEE++   AH+PFT+P          DL  ++
Sbjct: 406 RIAKELDMIDMSQFNFLWVVDWPMFEWSEEEERYMSAHHPFTLPTAESAHELEGDLAKVR 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  ++  + F  +G + E    +FG L  A + G PPHGG
Sbjct: 466 AVAYDIVLNGYELGGGSLRINQKDMQERMFRALGFTAEEANEQFGFLLEAMEYGFPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR+VMLL G  N+REV  FP +    D +  +PS VS +QL EL L+I
Sbjct: 526 LAIGLDRLVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEKQLEELQLQI 578


>gi|89898734|ref|YP_515844.1| aspartyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|89332106|dbj|BAE81699.1| aspartyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 584

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/594 (39%), Positives = 346/594 (58%), Gaps = 16/594 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
           +YRTH C +L +S+VG  VRLSGWVHR R HGG++F+D+RD +GITQ+V   D      +
Sbjct: 2   KYRTHRCNELSLSNVGERVRLSGWVHRYRNHGGVVFIDLRDRFGITQIVCCEDEKPELHQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
           +  SVRSEWVL ++G V  R     N+N+ TG IE+  ++++ILS A  LP  +  +   
Sbjct: 62  LVDSVRSEWVLSVEGTVCRRLEGMENSNLATGDIEVDLEQVDILSKARNLPFSISEDHIN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LD+RR  +   ++ R +++ + R  M  + F E  TP+L  S+PEGARD
Sbjct: 122 VNEELRLEYRYLDMRRGQILDRLIYRHKVMMACRQYMDTQGFTEVVTPVLGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  GSFYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+D+
Sbjct: 182 YLVPSRIYPGSFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFSQIDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF   +++   +E ++  +F     G  +     R+ Y +A   YGTDKPDLR  + +
Sbjct: 241 EMSFATPENLFPIIEQLVVEIFS--VRGINIDLPLPRMTYQEAKDLYGTDKPDLRFGLQL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +  EH     F +F   L+     + + +P  G   +R   D   E+ +  G  GL   
Sbjct: 299 RDCREHAKEFSFSIFLDQLAQGGTIKGFCVPG-GADMSRKQLDIYTEFVKRYGAMGLV-- 355

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARN 418
            W   +  +VA    VAK  +    +A+    D +D D    IA  P    + + D  R 
Sbjct: 356 -WIKKQENSVA--SNVAKFASEEVFKAMFADFDAKDNDILLLIAA-PESVANQSLDHLRR 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+E  + + + + F WI DFP +   +E+ KI   H+PFT P      L   D LS++
Sbjct: 412 LIAKERNLYDESQYNFVWITDFPLFA--KEDGKICSEHHPFTAPLEEDIPLLDTDPLSVR 469

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG+EIASG  R H +++  + FS + +S E ++ +FG    A   G PPH G
Sbjct: 470 SSSYDLVLNGYEIASGSQRIHNADLQNKIFSILELSPESIKEKFGFFIDALSFGTPPHLG 529

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IA G+DRI+M+L  A+++REV  FP +Q   DL+M +P+ +   QL+EL +++ 
Sbjct: 530 IALGLDRIMMVLTRAESIREVIAFPKTQKAADLMMSAPAEIMTSQLKELNIKVT 583


>gi|317014037|gb|ADU81473.1| aspartyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 579

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 225/589 (38%), Positives = 343/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKIIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR E+VL   G    R A   N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRGEFVLVAKGKARLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKHVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+    G+T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQAIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNSIFSNIAKDPKDKRIKALNVKGADALFSRSVLKELEEFVRQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  R D Q GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W++ FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVHFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTNAPSPINEEQLRELHIRL 575


>gi|300858570|ref|YP_003783553.1| aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686024|gb|ADK28946.1| Aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
          Length = 599

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 248/613 (40%), Positives = 345/613 (56%), Gaps = 34/613 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH  RTH  GDL     G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +    E
Sbjct: 1   MHVLRTHLAGDLRKDTAGQTVTLTGWVSRRRDHGGVIFIDLRDSSGLAQVVFRENDVA-E 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-- 118
            A  +RSE+ + + G+V +R   + N N+ +G+IE++   +EIL+ A  LP  +      
Sbjct: 60  KAHHLRSEFCIKVTGVVEARPEGSENPNLASGEIEINVNDLEILNEAAALPFQIDDASQS 119

Query: 119 --EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             E  E  R KYR+LDLRR T    +  R++   + R  +   +F+E  TP LT S+PEG
Sbjct: 120 GGEVGEEARLKYRYLDLRRPTQGGALRLRSKANQAARRVLDTHDFVEIETPTLTRSTPEG 179

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDFLVP+R+  GS+YALPQ+PQ +KQLLM +G + Y+QIA C+RDED R+DR P EF Q
Sbjct: 180 ARDFLVPARLKPGSWYALPQSPQLFKQLLMVAGMEHYYQIARCYRDEDFRADRQP-EFTQ 238

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+EMSFV+QDD++   E ++  +++    G  +     R+ Y DA+R YG+DKPDLR  
Sbjct: 239 LDIEMSFVDQDDVIALAEEIVSELWKLI--GYNIPTPIPRMTYADAMRLYGSDKPDLRFD 296

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPG 355
           I +   T++F  + FRVF           V A+  +GG    R   D   EWA+ +G  G
Sbjct: 297 IKIVECTDYFKDTTFRVFQNEY-------VGAVVMEGGASQPRRQLDAWQEWAKQRGAKG 349

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI   + E G ++  GPVAK++       I   +  Q GD  FF AGD     +    
Sbjct: 350 LAYIL--VGEDGELS--GPVAKNITESERAGIAAHVGAQPGDCIFFAAGDTKSSRALLGA 405

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGG 465
           AR  IA++LG+I    + F W++D P +E + +            K    H+ FT P+  
Sbjct: 406 ARGEIARKLGLIKDGDWAFTWVVDAPLFESSADATASGDVALGHSKWTAVHHAFTSPKPE 465

Query: 466 -MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
            +ES   N   +  A+ YD+VCNG EI  G IR H  +V  + F  +GI++E    +FG 
Sbjct: 466 WLESFDENPGEAT-AYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAREKFGF 524

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF  G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ + +EQ 
Sbjct: 525 LLDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPIPLEQR 584

Query: 585 RELGLRIVENPKK 597
           RE G+     PKK
Sbjct: 585 RETGVDF--KPKK 595


>gi|294101541|ref|YP_003553399.1| aspartyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616521|gb|ADE56675.1| aspartyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 602

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 241/589 (40%), Positives = 354/589 (60%), Gaps = 16/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L +    + V L+GWV R R  GG+IF+++ D+ G+TQVV NP+      E A
Sbjct: 13  RTVRCGELSLDQEDNKVVLNGWVRRRRDLGGLIFIELWDYTGVTQVVINPELVPEVHERA 72

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-GEREYP 121
           KS+RSE+V+ + G V  R   T+N ++ TG+IE+ A+   +LS A  LP  V     +  
Sbjct: 73  KSLRSEFVISVHGKVRKRPEGTVNLSMKTGEIEVVAEDFMLLSPAAPLPFEVSDATNKVD 132

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R +YR+LDLRRD + +N+  R +II   R  +   +F++  TP+LT S+PEGARD+L
Sbjct: 133 ENLRLRYRYLDLRRDKMQRNLRIRNQIIRFTRDFLARYDFVDIETPMLTKSTPEGARDYL 192

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G+FYALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+DMEM
Sbjct: 193 VPSRVNPGTFYALPQSPQIFKQILMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDMEM 251

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ ++DI   +E  + G+F E +  + +   F ++ Y +A+ R+G+DKPDLR P  +H+
Sbjct: 252 SFITEEDIYALVEEFMAGLFREIAQVD-IPTPFRKMDYWEAMDRFGSDKPDLRIPFEIHD 310

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V   F  S+F  F  +L+   GY V  +P  GG   +R     + E A+  G  GLA   
Sbjct: 311 VAYIFKESDFAPFKDLLAKG-GY-VRGLPLPGGASLSRKEVSLVEEKAKKLGASGLACFQ 368

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS--FAADARN 418
           ++    G +   GP+ K L+    + +  +  + +GD+ FF+ GD  +  +       R 
Sbjct: 369 FK---EGCLK--GPLVKFLSEEQRQRLVEKAALHEGDA-FFVLGDLNRSVASQILGQLRL 422

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+E  +++ + +EF W++ FP +E +EEE +    H+PFT P         ++   ++
Sbjct: 423 DLAKEHNLMDRDKWEFLWVVHFPLFERDEEENRWVAVHHPFTSPVIEDLPFLDSEPQKVR 482

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD V NG EI  G IR H  E+  + F  +  S+E    RFG L  A   G PPHGG
Sbjct: 483 SRAYDCVLNGNEIGGGSIRIHDPEIQEKVFQCLAFSREEARKRFGFLLDALSSGTPPHGG 542

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           IA G+DR+VMLL GA ++R+V  FP +Q    L+ G+PS VS EQL EL
Sbjct: 543 IAFGVDRLVMLLCGASSIRDVMAFPKTQKAQCLMSGAPSFVSQEQLDEL 591


>gi|289522219|ref|ZP_06439073.1| aspartate--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289504055|gb|EFD25219.1| aspartate--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 603

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 233/591 (39%), Positives = 342/591 (57%), Gaps = 14/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG+     +   V ++GWV + R  GGIIFL+I DH G+ QVV NP+++    E A
Sbjct: 17  RTVYCGNATEDHIEKKVVINGWVRKRRDLGGIIFLEIWDHTGLVQVVINPETSESVHERA 76

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +RSE+V+ I G+V  R A T N ++ TG +E+ A  + +LS +   P  +       E
Sbjct: 77  KQLRSEYVVAIKGVVKKRPAGTENPSLKTGNVEIIADDLMVLSPSTLPPFDLNEASAIDE 136

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR+ + +N+  R++  N  R  +    F+E  TP+LT S+PEGARD+LV
Sbjct: 137 NIRLKYRYLDLRREVMQRNLRLRSKAANYTRTFLTDAGFVEVETPMLTKSTPEGARDYLV 196

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQ+LM SG DRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 197 PSRVNPGKFYALPQSPQIFKQILMISGLDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 255

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ ++DI   +E+ ++G+F E + G  +   F R+ Y +A+ R+G+DKPDLR P  + ++
Sbjct: 256 FLTEEDIFELIEDYMKGLFRE-TIGVEIQTPFPRLSYSEAMERFGSDKPDLRIPFEIVDL 314

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
              F     R F   +      + + +P  G   +R     +   A+  G  GLAY    
Sbjct: 315 KAVFQGRGIRAFE--VGERGAIKGFVLPG-GASLSRQEMSTIEGKAKELGAKGLAYF--- 368

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIA 421
             + GN    GP+ K L+    + +  +  +  G++ F +A  D  K C      R  +A
Sbjct: 369 --QLGNEL-KGPMVKFLDEDGKKLVIEKSQLFQGNALFVMADQDRNKVCEVLGQLRLEVA 425

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++  +I    + F W++DFP +EW+E E +    H+PFT P+     L  ++   +++  
Sbjct: 426 RKYDLIEKGKWAFLWVVDFPLFEWSETENRYVSVHHPFTSPKNEDLYLLESEPWKVRSRA 485

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  +V    F  +G+ +   +NRFG L  A   G PPHGGIA 
Sbjct: 486 YDIVLNGNEVGGGSIRIHDPKVQESVFKALGLDEVEAKNRFGFLLSALSYGTPPHGGIAL 545

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G DR+VMLL GAK++R+V  FP +Q    LL G+PS V   QL EL +++ 
Sbjct: 546 GFDRLVMLLAGAKSIRDVIAFPKTQKAQCLLSGAPSYVDERQLEELHIKVT 596


>gi|145594364|ref|YP_001158661.1| aspartyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|189082140|sp|A4X5Y3|SYD_SALTO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145303701|gb|ABP54283.1| aspartyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 607

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/599 (38%), Positives = 345/599 (57%), Gaps = 19/599 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  +D GS V L+GWV R R HGG+IF+D+RD  G+ QVV        E A  
Sbjct: 3   RTHDAGSLRATDAGSTVTLAGWVARRRDHGGVIFVDLRDGSGVAQVVLRE-----EDAHV 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  + TG++E++A+++E+LS A  LPLPV  + E  + +
Sbjct: 58  LRNEYCVRVTGEVTRRPEGNENPELATGEVEVTAEELEVLSEAAPLPLPVDDQIEAGDDV 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR      +  R+      R  +   +F+E  TP LT S+PEGARDFLVP 
Sbjct: 118 RLRYRYLDLRRSGPASALRLRSAANQIARTVLHERDFLEIETPTLTRSTPEGARDFLVPV 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G++YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 178 RLQPGTWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +DD+++  E ++  ++ E + G+ ++    RI + +A+ RYG+DKPDLR  + +  +T+
Sbjct: 237 TEDDVIDLGEAIVSRLWRELA-GHQITRPIPRITWHEAMARYGSDKPDLRYGVELTELTD 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +   + FRVF+  +    GY    +   G   +R   D   +WA+++G  GLAY+   LD
Sbjct: 296 YLRGTRFRVFAGAIEAG-GYVGAVVMPGGAAQSRKELDGWQDWAKARGAKGLAYVV--LD 352

Query: 365 -ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS-FAADARNHIAQ 422
            E+G     GPVAK+L+  +   +   +  + GD+ FF AG   +        AR  IA+
Sbjct: 353 AETGEA--RGPVAKNLSTEHLAGLADVVGAKPGDAIFFAAGAESRAAQELLGAARVEIAR 410

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-----HNPFTMPQGGMESLKGNDLLSI 477
              +++ + + FCW++D P +E   + ++         H+PFT P               
Sbjct: 411 RANLVDESAWAFCWVVDAPMFERVTDREEAGAGGWTAVHHPFTAPNAEWMDRFEEAPDRA 470

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+ YD+VCNG EI  G IR H  +V  + F  +GI+ E   ++FG L  AF+ G PPHG
Sbjct: 471 LAYAYDIVCNGNEIGGGSIRIHRGDVQQRVFDLLGITPEQARDKFGFLLEAFKYGPPPHG 530

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GIA G DR+ MLL GA ++REV  FP ++   D L  +P+ ++  Q  E G+     P+
Sbjct: 531 GIAFGWDRVCMLLAGADSIREVIAFPKTRGGFDPLTAAPTPITAAQRLEAGVDARPKPE 589


>gi|284991587|ref|YP_003410141.1| aspartyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284064832|gb|ADB75770.1| aspartyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 591

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 233/585 (39%), Positives = 334/585 (57%), Gaps = 19/585 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD GS V L+GWV R R HGG++F+D+RD  G  QVV        E A +
Sbjct: 3   RTHDAGTLRASDAGSPVTLAGWVARRRDHGGVVFVDLRDASGYVQVVVRE-----EEAHA 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  + TG+IE++A ++ +LS A  LP P+  ++   + +
Sbjct: 58  LRNEFCVLVTGEVRRRPEGNENPELPTGEIEVAAAELRVLSSAAPLPFPIETDQAASDDV 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R++YR+LDLRR    + +  R+ +    R  M    F+E  TP LT S+PEGARDF+VP 
Sbjct: 118 RYRYRYLDLRRQGPARVLRLRSEVNRVARGVMAQHGFVEVETPDLTRSTPEGARDFVVPV 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM  G +RY+QIA CFRDED R+DR P EF QLD EMSFV
Sbjct: 178 RLQPGKWYALPQSPQLFKQLLMIGGLERYYQIARCFRDEDFRADRQP-EFTQLDFEMSFV 236

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++DD+L  +E+V+R ++ E +          R+ Y +A+ R+G+DKPDLR  I +  +T 
Sbjct: 237 DRDDVLAVVEDVVRALWRELAAYEV--PEIPRMSYREAMDRFGSDKPDLRFGIELTELTS 294

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF       P      +PA G    RAF D   +WA+S+G  GLAY+   + 
Sbjct: 295 YFAETPFRVFQ-----TPYVGAIVMPAGGSQPRRAF-DAWQDWAKSRGHRGLAYV--TIA 346

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+++      +   +  Q GD  FF AG   +       ARN IA+ L
Sbjct: 347 EDGTLG--GPVAKNISEAERSGLVEAVGAQPGDCVFFAAGARRQAQELLGAARNEIARRL 404

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            +I    + F +++DFP +E   E+ +  F H+PFT P          D  +  +  YDL
Sbjct: 405 ELIEPGSWSFLFVVDFPMFE-ETEDGEWTFMHHPFTSPTSEWRDRFAEDKGAALSDAYDL 463

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           VCNG E+ASG +R    ++  + F  +G+S+E    RFG    AF  G PPH G A G D
Sbjct: 464 VCNGNELASGSVRIADPDLQERVFETLGMSREEARERFGFFLEAFAYGPPPHAGAAIGWD 523

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           R   LL G +++REV  FP +    D L G+P+ ++  Q +E G+
Sbjct: 524 RTCALLAGVESIREVIAFPKTGAGFDPLTGAPTPITEAQRKEAGI 568


>gi|291550619|emb|CBL26881.1| aspartyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 600

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/591 (39%), Positives = 342/591 (57%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH CG+L  ++VG  V + GWV + R  GG++F D+RD  GI QVV      D+A  E 
Sbjct: 10  RTHRCGELSAANVGETVTIMGWVQKNRNKGGLVFTDVRDRSGIIQVVCEEGTTDAAIIEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+R+E+V+ + G V  RS   +N  I TG+IE+   ++ +LS ++  P P+    +  
Sbjct: 70  AASLRAEYVVAVVGKVEKRSG-AVNDKIATGEIEVIPSELRVLSESQTPPFPIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR KYR+LDLRR  L +N+  +++++   R     E F+E  TP+L  ++PEGARD+L
Sbjct: 129 EDIRLKYRYLDLRRPDLQRNLRMKSQVMTLTRQFFSDEGFLEVETPMLGKTTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ GSFY LPQ+PQ YKQLLM SG DRY QIA CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRIHPGSFYGLPQSPQLYKQLLMCSGVDRYIQIARCFRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD++   E  L+ +F+E  + + V     R+ + +A+ RYG+DKPDLR  + + +
Sbjct: 248 SFVDVDDVIEVNEKYLKKLFKEVLDVD-VQLPIQRMTWQEAMNRYGSDKPDLRFGMELKD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V++      F VF+  L    G  V  I AKG G   R   D++  + +  G  GLAY+ 
Sbjct: 307 VSDVVKDCGFAVFTGAL--ENGGSVRGINAKGQGSMPRKKIDKLTAFVKDYGAKGLAYV- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             L E G V      AK +     +A+   +D + GD   F A             R  +
Sbjct: 364 -ALQEDGTVK--SSFAKFMTDEQMDALVKAMDGEPGDLLLFAADKNKVVWDSLGALRVEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +++ N + F WI +FP  EW+EE+ +    H+PFTMP         +D   ++A 
Sbjct: 421 AKQLELLDKNEYRFVWITEFPLLEWSEEQNRFVAMHHPFTMPMEEDIQYIESDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R    ++    F  +G +KE   ++FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIFQDDIQEMMFKALGFTKEQAYSQFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VML+    ++R+V  FP  ++   L+  +P+  S +QL EL L +
Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKIKDASCLMTEAPTPASEKQLEELSLAV 591


>gi|240126291|ref|ZP_04739177.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268684875|ref|ZP_06151737.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268625159|gb|EEZ57559.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 602

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/598 (39%), Positives = 357/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +G  V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLGITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           +++GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGA-DKAKVVNEAVGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRL 592


>gi|221218187|ref|ZP_03589653.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|225549503|ref|ZP_03770469.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|221192135|gb|EEE18356.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|225369780|gb|EEG99227.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 586

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/592 (38%), Positives = 352/592 (59%), Gaps = 12/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+ N +    +IA+
Sbjct: 2   FKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVN-EEKLLKIAE 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + I GL++ R    INAN+ TG  E+ A+ IEI+S   ELP  +       E+
Sbjct: 61  KIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDNNNASEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + +YR+LDLRRD+L   I+ R +  + +R  +I   F+E  TP    S+PEGARDF++P
Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++++I   +EN+L  +F+   N N +   F +I Y  ++ +YG+DKPD R  + + +++
Sbjct: 240 VKKENIFKLIENMLFLIFKNCININ-LPKKFKKITYKKSMNKYGSDKPDTRFELELQDIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
            +  +SEF +F   L      ++  +  K    +RA  + + E A+     GL   F ++
Sbjct: 299 RNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY--FTKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422
           +   N    G +AK L     E I+    +++ D  FF A +  +  C      R  IA 
Sbjct: 357 E---NNKFSGGIAKFLKTEEQELIKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIAN 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481
           +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+   + +L+ N   +I    
Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI- 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE +E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV+
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583


>gi|328956043|ref|YP_004373376.1| aspartyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456367|gb|AEB07561.1| aspartyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 596

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 226/595 (37%), Positives = 344/595 (57%), Gaps = 13/595 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--- 57
           MH   + + G+L  +D+G  V L+GWV R R HGG+IF D+RD  G+TQ   +P+ +   
Sbjct: 10  MHSMHSRTSGELRAADIGQEVTLTGWVWRRRDHGGLIFCDLRDRTGLTQCTFDPEHSGGE 69

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F  A+++R EW + + G+V SR  + +N  + TG+IE+    I + + A+  P P+   
Sbjct: 70  AFRTAETMRPEWPILVRGIVKSRGEDMVNPKLATGEIEVLVDHITVFNRAKTPPFPIEDG 129

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +  E  R +YR+LD+RR  +   +  R     ++R  +    F E  TP+L  S+PEGA
Sbjct: 130 IDTAEDTRLRYRYLDMRRPEVAAKLRLRDEFAFAVRKALHDRAFTEIETPVLGKSTPEGA 189

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RDF+VPSR   GSFYALPQ+PQ  KQLLM  G +RY+Q+A C+RDED R+DR P EF Q+
Sbjct: 190 RDFIVPSRTQPGSFYALPQSPQLLKQLLMIGGVERYYQVAKCYRDEDLRADRQP-EFTQV 248

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV +DD++  ME+VL   F +   G        RI Y +A+  +G+DKPD R  +
Sbjct: 249 DVEMSFVTEDDVICEMEDVLLEAFTQVGVG--FPAPLRRIPYWEAMDTFGSDKPDTRYGM 306

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGL 356
            + ++++ F HS+F+VF+       G  V A+ A+G G   RA  D++++ A   G  GL
Sbjct: 307 HLIDLSDTFEHSDFKVFAHAAKAE-GQVVKALNARGAGAWPRAQIDKLSDVATRLGAKGL 365

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I +R D  G+V+   P+AK  +      +R R D++ GD    +AG+ L         
Sbjct: 366 AWIAFRPD--GSVS--SPIAKFFSESEMADLRSRCDVESGDLVMLVAGERLCADEVLGGM 421

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R H+A  LG+      +F W++DFP ++++  E++    H+PFT P+         D L+
Sbjct: 422 RTHMADALGVPR-QGHDFLWVVDFPLFKYDAAEQRFASEHHPFTQPRDEDREKIATDPLA 480

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + +  YDLV +GFE   GGIR H S+V L+    +G  +     +FG L  A   G PP 
Sbjct: 481 VGSCTYDLVMDGFEAGGGGIRIHESDVQLKVLERLGFDEASAREQFGFLLDALDYGAPPM 540

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GG A G+DRI MLL  + ++R+V  FP + +  DL++ +PS VS  QL ++ +R+
Sbjct: 541 GGCAFGLDRICMLLTDSASIRDVIAFPKTSSGSDLMLRAPSPVSSRQLEDVSIRL 595


>gi|118586991|ref|ZP_01544423.1| aspartyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|118432613|gb|EAV39347.1| aspartyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
          Length = 591

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 237/598 (39%), Positives = 354/598 (59%), Gaps = 17/598 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
           + RT   G +     G  + L GWV + R  GG+IF+D+RD  GI Q+  + + +    +
Sbjct: 4   KQRTVYAGLVNEKMAGQTITLKGWVQKRRDLGGLIFVDLRDREGIVQLTFSDEFSKDALK 63

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ I G+V  R+   IN  + TG+IE+   + EIL+ ++  P  +    + 
Sbjct: 64  TAERIRSEYVISITGVVSLRAESAINPKMKTGKIEVLVHQAEILAESKTPPFDIEDGVDV 123

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARD 179
            E ++ KYR+LDLRR  + K ++ R++I++S   R + EN F++  TP L  S+PEGARD
Sbjct: 124 NEELKLKYRYLDLRRPEMQKGLILRSKIMSS-SMRFMEENGFLDIETPYLAKSTPEGARD 182

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  GSFYALPQ+PQ +KQLLM +GFDRYFQIA CFRDED R DR P EF QLDM
Sbjct: 183 YLVPSRIYPGSFYALPQSPQLFKQLLMGAGFDRYFQIARCFRDEDLRGDRQP-EFTQLDM 241

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ Q +I+  +   +  +  + +  N  SN+F  + + +A+ R+G+DKPDLR  I +
Sbjct: 242 ETSFMNQGEIMELVNRWITQIMSDVAKANIDSNSFPVLHWQEAMDRFGSDKPDLRFGIEL 301

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLA 357
           H+V+E    + F VF+   ++  G  V AI A  G     R   D   ++ +  G  GLA
Sbjct: 302 HDVSEIMKQTNFTVFTG--AIKKGGFVKAIVAPKGATKFTRKMIDGQTDYIKRFGAKGLA 359

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +I +   E+G  +  GP+AK ++ V  + +   L + DGD  FF A             R
Sbjct: 360 WIKF---ENGEFS--GPIAKFVSDVKGQLVSF-LSLSDGDLVFFAADTFSVVSDTLGYLR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL-KGNDLL 475
            ++A+EL +IN + ++F WI+D+P +E++E+  +   AH+PFTMP +  +  L  G D  
Sbjct: 414 KYVAKELDLINESKWDFAWIVDWPLFEYSEDFGRWIAAHHPFTMPNEEDLHYLDDGEDPH 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              A  YDLV NG+E+ SG IR H  ++  +    +G + +  E  FG L  A + G PP
Sbjct: 474 LAHAQSYDLVLNGYELGSGSIRIHTMDIQKKMLKALGFTSDQAEKAFGFLLEAMEYGFPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            GGIA G+DR+ MLL G +N+REV  FP + N  + +  +PS VS +QL ELGLR+ E
Sbjct: 534 MGGIALGLDRLAMLLSGKENIREVIAFPKNSNATEPMTQAPSRVSEKQLTELGLRVPE 591


>gi|308063594|gb|ADO05481.1| aspartyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 577

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/589 (37%), Positives = 345/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+    G+ +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHNISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGV---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+    +++  DL  I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECKDLEEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|110833610|ref|YP_692469.1| aspartyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|123050640|sp|Q0VRK1|SYD_ALCBS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110646721|emb|CAL16197.1| aspartyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 587

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/590 (40%), Positives = 348/590 (58%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CGDL  S  G  V L GWV R R HGG+IFLD+RD  G+ QVV +PD+   F +A 
Sbjct: 2   RSHYCGDLRASHDGETVELCGWVSRRRDHGGVIFLDLRDRNGLVQVVFDPDTVDAFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V  R     N  + TG IE+  +++ IL+ AE  P  +       E 
Sbjct: 62  KVRSEYVVRLSGRVRMRDESVRNNKMATGDIEVLGKELTILNEAETPPFELDAHSAAGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR++DLRR  + KN   R+R+ + +R  +  E F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKYRYMDLRRPDVLKNFQFRSRLTHVVRAFLEGEGFMDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDLEASF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE++DI+   E ++R VF+E  + +    +F R+ + +A++R+G+DKPDLR  + + ++ 
Sbjct: 241 VEEEDIMGITERMVRSVFKELLSVDL--PDFPRMPFSEAMQRFGSDKPDLRIALELIDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG   +R   D   ++    G  GLAYI   
Sbjct: 299 DLLAGVDFKVFSGPAN-DPKGRVAAMRVPGGCSLSRKDIDGYTKFVSIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+ K L     + I  R   + GD  FF A D  K  + A  A R  + 
Sbjct: 358 DLAAGAEGLQSPILKFLTEDAIKGILERTGAETGDLIFFGA-DKAKIVNEALGALRVKVG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L ++    +   W++DFP +E  E+E +    H+PFTMP    E LK N   ++ +  
Sbjct: 417 HDLNLVEGE-WAPLWVVDFPMFE--EDEGQYHALHHPFTMPSCSAEELKSNPGEAL-SRA 472

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H   +    F  +GIS E  E +FG L    + G PPHGG+A 
Sbjct: 473 YDMVLNGTELGGGSIRIHSPAMQRTVFEALGISDEEAEEKFGFLLDGLKYGAPPHGGLAF 532

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VML+ G +++R+V  FP +Q     +  +PS V  +QLRE+G+++
Sbjct: 533 GLDRMVMLMTGCESIRDVIAFPKTQTAACTMTNAPSPVDNKQLREVGVQV 582


>gi|329768511|ref|ZP_08259999.1| aspartyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836661|gb|EGF86318.1| aspartyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 590

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/595 (39%), Positives = 360/595 (60%), Gaps = 19/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RT   G +    VG  V L GWV + R  G +IF+D+RD  G+ Q V     ++   E+A
Sbjct: 6   RTEYTGRIDEKYVGKKVTLKGWVSKRRDLGNLIFIDVRDRMGVVQCVFSGEKNAELHELA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++R+E+V+ I+G V+ R+  T+N  I +G++E+ A K+EILS A+ LP  +       E
Sbjct: 66  GTLRNEFVVSIEGEVVLRNESTVNEKIASGKVEVIADKLEILSKAKTLPFVLDDASLSSE 125

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  L + +  R++I  + R  +    F++  TPILT S+PEGARD+LV
Sbjct: 126 ELRLKYRYLDLRRTELAEVLHLRSKITKATRDYLDNNMFVDVETPILTKSTPEGARDYLV 185

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+Q+A CFRDED R+DR P +F Q+DMEMS
Sbjct: 186 PSRVHPGEFYALPQSPQLFKQLLMVAGFDRYYQVARCFRDEDLRADRQP-DFTQIDMEMS 244

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++IL  +E ++  V +E   G  V   F R+ Y++A+ R+G+DKPD R  + + +V
Sbjct: 245 FMSQEEILTMIEGLIAHVMKEV-KGIDVVLPFPRLDYEEAMERFGSDKPDTRFGMELKDV 303

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++   + +F+VFS   +V  G  V  I AKG     +R   D + ++  + G  GLA++ 
Sbjct: 304 SDLVKNLDFKVFSN--AVEQGGAVKCIVAKGCAEQYSRKDIDALGKYVANYGAKGLAWV- 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
            ++ E G     G +AK       + +  R+D + GD   F A D  K C  +  A R  
Sbjct: 361 -KVTEEGL---NGAIAKFFTDEVAQELVARVDAEVGDIILF-AADSKKVCYASLGALRQK 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A +L +I+ N + + W++++P  E++EE+ +   AH+PFTMP+  +E ++  +    KA
Sbjct: 416 LAADLDLIDKNKYNYLWVVNWPLLEYDEEKGRYSAAHHPFTMPK--VEDVELLETAPEKA 473

Query: 480 F--QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +   YD+V NG+E+  G IR +  EV    F  +G ++E  + +FG L  AF+ G+PPHG
Sbjct: 474 YAQAYDIVLNGYELGGGSIRIYDKEVQSSMFKALGFTQEQAQEQFGFLLDAFEYGVPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G A G+DR VMLL G  N+R+   FP + N  D +  +PS V +EQL EL + ++
Sbjct: 534 GCALGLDRFVMLLAGRDNLRDTIAFPKTANAADPMTQAPSPVDLEQLLELNISLL 588


>gi|308184401|ref|YP_003928534.1| aspartyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308060321|gb|ADO02217.1| aspartyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 577

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/589 (37%), Positives = 346/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR  + ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLSAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+    G+ +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHNISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKAGDIVFFGAGDKEIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+    +++  DL  I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECKDLEEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|302330840|gb|ADL21034.1| Aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 599

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 248/613 (40%), Positives = 345/613 (56%), Gaps = 34/613 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH  RTH  GDL     G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +    E
Sbjct: 1   MHVLRTHLAGDLRKDTAGQTVTLTGWVSRRRDHGGVIFIDLRDSSGLVQVVFRENDVA-E 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-- 118
            A  +RSE+ + + G+V +R   + N N+ +G+IE++   +EIL+ A  LP  +      
Sbjct: 60  KAHHLRSEFCIKVTGVVEARPEGSENPNLASGEIEINVNDLEILNEAAALPFQIDDASQS 119

Query: 119 --EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             E  E  R KYR+LDLRR T    +  R++   + R  +   +F+E  TP LT S+PEG
Sbjct: 120 GGEVGEEARLKYRYLDLRRPTQGGALRLRSKANQAARRVLDTHDFVEIETPTLTRSTPEG 179

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDFLVP+R+  GS+YALPQ+PQ +KQLLM +G + Y+QIA C+RDED R+DR P EF Q
Sbjct: 180 ARDFLVPARLKPGSWYALPQSPQLFKQLLMVAGMEHYYQIARCYRDEDFRADRQP-EFTQ 238

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+EMSFV+QDD++   E ++  +++    G  +     R+ Y DA+R YG+DKPDLR  
Sbjct: 239 LDIEMSFVDQDDVIALAEEIVSELWKLI--GYNIPTPIPRMTYADAMRLYGSDKPDLRFD 296

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPG 355
           I +   T++F  + FRVF           V A+  +GG    R   D   EWA+ +G  G
Sbjct: 297 IKIVECTDYFKDTTFRVFQNEY-------VGAVVMEGGASQPRRQLDAWQEWAKQRGAKG 349

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI   + E G ++  GPVAK++       I   +  Q GD  FF AGD     +    
Sbjct: 350 LAYIL--VGEDGELS--GPVAKNITESERAGIAAHVGAQPGDCIFFAAGDTKSSRALLGA 405

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGG 465
           AR  IA++LG+I    + F W++D P +E + +            K    H+ FT P+  
Sbjct: 406 ARGEIARKLGLIKDGDWAFTWVVDAPLFESSADATASGDVALGHSKWTAVHHAFTSPKPE 465

Query: 466 -MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
            +ES   N   +  A+ YD+VCNG EI  G IR H  +V  + F  +GI++E    +FG 
Sbjct: 466 WLESFDENPGEAT-AYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAREKFGF 524

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF  G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ + +EQ 
Sbjct: 525 LLDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPIPLEQR 584

Query: 585 RELGLRIVENPKK 597
           RE G+     PKK
Sbjct: 585 RETGVDF--KPKK 595


>gi|168001325|ref|XP_001753365.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695244|gb|EDQ81588.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 683

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 246/602 (40%), Positives = 344/602 (57%), Gaps = 28/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDS--ACFEI 61
           R+H CG L   DVG+ VR+ GWV   R HG I F+++RDH GI QV   +PD+   C E 
Sbjct: 88  RSHECGKLTEKDVGTRVRVCGWVASQRSHGAIAFVNLRDHSGIVQVRECDPDNFPDCHET 147

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIE-LSAQKIEILS-VAEELPLPVF---G 116
           A+ VR E+V+ ++G V  R  E  NA + TG IE + A+ +++L+ V   LP  V     
Sbjct: 148 AQHVRVEYVVAVEGTVQLRPKEVANARMATGSIEVIIAESLQVLNKVGLALPFLVTLADD 207

Query: 117 EREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSP 174
            +E P E +R +YR LDLRR  ++ N+  R  II  MR  +    +FIE  TPILT S+P
Sbjct: 208 NKEMPSEEVRLRYRHLDLRRAQMNTNLRIRHNIIKLMRRHLEDVHDFIEIETPILTKSTP 267

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EGARD+LVPSRV  G FYALPQ+PQ +KQ+LM SGF+RY+Q+A CFRDED R+DR P EF
Sbjct: 268 EGARDYLVPSRVQPGDFYALPQSPQLFKQMLMVSGFNRYYQLARCFRDEDLRADRQP-EF 326

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            QLD+E+SF   +D+L   E ++R VF++   G  + N F R+ Y +A+ RYG+DKPDLR
Sbjct: 327 TQLDLELSFTPLEDMLELNEGLMRHVFKQII-GVDLPNPFRRVTYAEAMSRYGSDKPDLR 385

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN-----EWAR 349
             + +  V+E F  S F  FS  +      +  +IP   GG ++    R+      + A 
Sbjct: 386 YGLELVKVSELFAGSSFAPFSSAVEEGGLVKAISIP---GGSSKISATRLKKGDVYQQAI 442

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
             G  GL Y+  ++   G + G   +   L+    + +        GD   F AG P   
Sbjct: 443 KSGAKGLPYV--KVLAGGELEGPPALVGSLSPEKKQELVSLCASNAGDLIVFAAG-PDSS 499

Query: 410 CSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                DA R ++A  L I++ +     W+ DFP +EWNE+E++++  H+PFT P      
Sbjct: 500 VHRTLDALRTYLADNLDIVDKSAHAILWVTDFPMFEWNEDEQRLEALHHPFTAPHPD--- 556

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
               DL + +A  YDLV NG EI  G +R +   V  +  S +G++ E  E +FG L  A
Sbjct: 557 -DMGDLKNARALAYDLVYNGVEIGGGSLRIYKRSVQEKVLSAIGLTPEEAEEKFGFLLEA 615

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
              G PPHGGIA G+DR+VMLL G  ++R+V  FP S     LL  +PS+V   QL +L 
Sbjct: 616 LDLGAPPHGGIAYGLDRLVMLLAGETSIRDVIAFPKSTTARCLLTNAPSSVDSSQLSQLS 675

Query: 589 LR 590
           LR
Sbjct: 676 LR 677


>gi|310658604|ref|YP_003936325.1| aspartyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308825382|emb|CBH21420.1| aspartyl-tRNA synthetase [Clostridium sticklandii]
          Length = 586

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 239/596 (40%), Positives = 355/596 (59%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTH CGDL    +   V L GWV R R  GG+IF+D+RD  GI Q+V +   D   FE A
Sbjct: 3   RTHYCGDLRNEHINQEVVLMGWVQRARNLGGLIFVDLRDREGICQIVFDEEIDKQAFEKA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             + SE+V+ I G+V  RS++  N+NI TG IE+ A  I+IL+ A   P+ +  + +  E
Sbjct: 63  SKIGSEYVISISGIVRERSSK--NSNIPTGDIEIFANSIDILNEANTPPIYIKDDDDVSE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLR+  + KN + R ++   +R  +  E FI+  TP+LT  +PEGARD+LV
Sbjct: 121 NLRLKYRYLDLRKPKMQKNFILRHKVTQIVRNFLSQEGFIDVETPMLTKPTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D EMS
Sbjct: 181 PSRVSNGKFYALPQSPQLFKQLLMVSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDCEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +D++  ME ++  VF+E  N   +     R+ YD+A+ R+G+DKPD+R    + ++
Sbjct: 240 FVDMEDVMQIMERLIAKVFDEALNVK-IDLPLQRMTYDEAMSRFGSDKPDVRFGFEIVDL 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           TE      F VF +  ++  G  V AI   G   N  R     + + A++ G  GLA+I 
Sbjct: 299 TEEVKDCGFSVF-ETSAMEEGKSVRAININGYESNFTRKGITALEDVAKTYGAKGLAWI- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            +L   G  +   P++K +N      I  ++D + GD   F+A  D + F S     R  
Sbjct: 357 -KLTSEGVNS---PISKFINDEAMNRILSKMDAKTGDLILFVADRDKIVFDSLGH-VRID 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIK 478
            A++L ++  + ++  ++ +FP +E++E+  +    H+PFT P    ME L+ N    ++
Sbjct: 412 AAKKLDLLKKDEYKLLYVTEFPQFEYDEDNNRYVAMHHPFTSPLDEDMELLESNP-SKVR 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G IR H S++  + F+ +G S E   ++FG L  AF+ G PPHGG
Sbjct: 471 AKAYDMVLNGVELGGGSIRIHNSKIQEKMFTALGFSTEEAWDKFGFLLEAFKYGTPPHGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA G+DR++MLL G +++REV  FP +QN    L  +PS      L ELG+ +++N
Sbjct: 531 IAFGLDRLIMLLAGEESIREVIAFPKTQNASCPLTNAPSEADNTALLELGIGLLDN 586


>gi|228470504|ref|ZP_04055371.1| aspartyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228307800|gb|EEK16756.1| aspartyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 580

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/594 (39%), Positives = 344/594 (57%), Gaps = 19/594 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH+CG L  SD G  V L+GWV ++R  G + FLD+RD YGITQ+    D +   +  
Sbjct: 2   YRTHTCGALRASDEGQQVTLAGWVAKIRRMGAMTFLDLRDRYGITQIFF--DESHQALLS 59

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V  EWVL + G V  RS  ++N  I TGQIE+ A+ +++L+ A+  P  +    +  + 
Sbjct: 60  EVGREWVLAVTGTVRLRS--SVNEKIPTGQIEILAESMKVLNRADTPPFTIEDVSDGGDD 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  +  NI  R R+    R  +   +F+E  TP+L  S+PEGARDF+VP
Sbjct: 118 LRMKYRYLDLRRRPVLSNIELRHRMTMETRRYLDGLHFLEIETPMLIGSTPEGARDFVVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+N G FYALPQ+PQ +KQLLM +G DRYFQI  CFRDED R+DR P EF Q+D EMSF
Sbjct: 178 SRMNPGQFYALPQSPQTFKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMSF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VEQDDIL+T E + + +F+E   G  +     R+ + +A+ RYG+DKPDLR  + +  VT
Sbjct: 237 VEQDDILSTFEGLAKHLFKEI-RGIDLPTPLRRMTWYEAMDRYGSDKPDLRFGMEIEEVT 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLAYIF 360
           +      F V      V+    + AI   G     R   D++ ++ +    G  GL ++ 
Sbjct: 296 KTIQGHGFGV------VDDAEYIGAIVVTGKADYTRKQIDQLTDFVKRPQVGAKGLLWLR 349

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           ++ D +   +      K L     +A+  +L MQ GD  F I+G            R H+
Sbjct: 350 YQADGTMKSS----FDKFLTADQLKALADQLSMQPGDIAFLISGGKRTAQKQLGTLRLHV 405

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ELG++    +E  W++DFP  EW+EE ++    H+PFT P+   +    +D  S++A 
Sbjct: 406 ASELGLMKPGHYECLWVVDFPLLEWDEETQRYYAMHHPFTAPKPEDQDRLESDPGSVRAD 465

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +E+  + F+ +G +KE  E +FG L  AF+ G PPHGGIA
Sbjct: 466 AYDMVINGVEVGGGSIRIHDAELQARVFAALGFTKERAEEQFGFLMNAFKYGAPPHGGIA 525

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR V L+    ++R+   FP + +  D+++ +P+ +  EQL EL L + E 
Sbjct: 526 FGLDRWVSLMAELDSIRDCIAFPKNNSGRDVMIDAPARLDPEQLDELHLTVRET 579


>gi|194099292|ref|YP_002002386.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|238693212|sp|B4RPA1|SYD_NEIG2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|193934582|gb|ACF30406.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
          Length = 602

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/598 (39%), Positives = 357/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +G  V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLGITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           +++GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGA-DKAKVVNEAVGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQGKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRL 592


>gi|240116260|ref|ZP_04730322.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|240128757|ref|ZP_04741418.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268601925|ref|ZP_06136092.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268687142|ref|ZP_06154004.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268586056|gb|EEZ50732.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268627426|gb|EEZ59826.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 602

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/598 (39%), Positives = 357/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +G  V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLGIAGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           +++GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGA-DKAKVVNEAVGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRL 592


>gi|227833220|ref|YP_002834927.1| Aspartyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262184206|ref|ZP_06043627.1| aspartyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|254781728|sp|C3PGN5|SYD_CORA7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|227454236|gb|ACP32989.1| Aspartyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 606

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 245/613 (39%), Positives = 347/613 (56%), Gaps = 33/613 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L     G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +S   E A  
Sbjct: 3   RTHLAGELRKEMAGETVTLTGWVARRRDHGGVIFIDLRDRSGVAQVVFR-ESEVAERAHD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121
           +RSE+ + + G+V  R   + NAN+ +G+IE++   +E+L+ +  LP  +       E  
Sbjct: 62  LRSEYCVKVTGVVEPRPEGSANANLASGEIEVNVSDLEVLNKSAALPFQIDDPSSSGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR+  H+ +  R+    + R  + + +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRERQHEALRLRSAANRAAREVLDSHDFTEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E ++  +++    G  +     R+ Y DA++ YG+DKPDLR  I +  
Sbjct: 241 SFVDQDDVIALAEEIVSALWKLI--GYEIKTPIPRMTYADAMKYYGSDKPDLRFDIKIVE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360
            TE F  + FRVF           V A+  +GG    R   D   EWA+ +G  GLAYI 
Sbjct: 299 CTEFFKDTTFRVFQNEY-------VGAVVMEGGASQPRRQFDAWQEWAKQRGAKGLAYI- 350

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +   GPVAK++     E I   +  + GD+ FF AGD     +    AR  I
Sbjct: 351 -TIAEDGTLG--GPVAKNITDAEREGIAEHVGAKPGDAIFFAAGDVKSSRALLGAARGEI 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGG-MESL 469
           A++L +I    + F W++D P +E   +            K    H+ FT P+   ++S 
Sbjct: 408 AKKLDLIKDGDWAFTWVVDAPLFEPAADATASGDVALGHSKWTAVHHAFTSPKPEYLDSF 467

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
             N   ++ A+ YD+VCNG EI  G IR H  +V  + F  +GI +E  + +FG L  AF
Sbjct: 468 DENPGEAL-AYAYDIVCNGNEIGGGSIRIHDQDVQKRVFDVMGIGEEEAQEKFGFLLDAF 526

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           Q G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P T+  EQ +E G+
Sbjct: 527 QFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPGTIPAEQRKETGV 586

Query: 590 RIVENPKKILKIS 602
                P+K  K +
Sbjct: 587 DF--KPEKAAKAA 597


>gi|308061948|gb|ADO03836.1| aspartyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 577

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/589 (37%), Positives = 345/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+    G+ +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHNISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+    +++  DL  I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECKDLEEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|33241301|ref|NP_876243.1| aspartyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|46577199|sp|Q7V9I1|SYD_PROMA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33238831|gb|AAQ00896.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 605

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/605 (38%), Positives = 355/605 (58%), Gaps = 33/605 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CG+L    + S V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  S  F +A
Sbjct: 2   RSNYCGELRKKHINSNVQLCGWVDRRRDHGGVIFIDLRDRTGTIQITIDPDQGSELFTVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYP 121
           +++R+E V+ I G + +R +E+ N  + TG+IE+ A  +E+L+ +   LP  +    + P
Sbjct: 62  ENLRNETVVQISGTIRARPSESCNQKLKTGEIEVLANHLEVLNQIQGNLPFSISVHDDEP 121

Query: 122 --ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLR+D + KN+  R  ++ + R  +  ENF+E  TPILT S+PEGARD
Sbjct: 122 IKEELRLRHRYLDLRKDRMTKNLRLRHEVLKTARNFLEQENFLEVETPILTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV +G ++ALPQ+PQ +KQLLM  G +RY+QIA CFRDED RSDR P EF QLD+
Sbjct: 182 YLVPSRVCEGDWFALPQSPQLFKQLLMVGGIERYYQIARCFRDEDLRSDRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ Q++IL   E ++  +++    G  + + F R+ + +++ R+GTD+PD R  + +
Sbjct: 241 EMSFMSQEEILGLTEKLISSIWKSVK-GVDLVHPFPRLTWQESMDRFGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG----------GNRAFCDRMNEWAR 349
            NV++      F+VFS   +++ G  V  I   GG           G   F +     A 
Sbjct: 300 KNVSQILKGIGFKVFSG--AIDAGGSVKCITITGGNQLISNVRIKPGGDIFSE-----AE 352

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
             G  GLA+I  R+  +G +  +G +  +LNI   E +  + +  +GD   F AGD    
Sbjct: 353 KAGAKGLAFI--RVRGNGEIDTIGAIKDNLNIAQKEELLKQTNANEGDLILFAAGDTTTV 410

Query: 410 CSFAADARNHIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG- 464
               A  R  +A++L +I    N   + F W++DFP +E+N +E +++  H+PF  P   
Sbjct: 411 NKTLARLRQFLAKDLDLIPFKLNNEQWNFLWVVDFPMFEFNSDENRLEALHHPFCAPNQS 470

Query: 465 --GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
             G   L   +L + +A  YDLV NG E+  G +R H  ++ L     +G+  +  +  F
Sbjct: 471 DLGQRRLWETNLPTARAQAYDLVLNGLELGGGSLRIHNPDLQLTVLKTIGLPLQEAKKEF 530

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           G L  A + G PPHGG+A G+DRIVMLL G +++R+   FP +Q    LL  +P+ VS +
Sbjct: 531 GFLLEALEMGAPPHGGLAFGLDRIVMLLAGEESIRDTIAFPKTQQAKCLLTEAPAEVSKK 590

Query: 583 QLREL 587
           QL+EL
Sbjct: 591 QLKEL 595


>gi|188994130|ref|YP_001928382.1| aspartyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|238691459|sp|B2RHE0|SYD_PORG3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|188593810|dbj|BAG32785.1| aspartyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 587

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 232/596 (38%), Positives = 346/596 (58%), Gaps = 17/596 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61
           YRT++CG+L +S +   V L GWV RVR  GG+ F+D+RD YG TQ+V N DSA  E+  
Sbjct: 2   YRTNTCGELRLSHLQQTVTLCGWVQRVRRMGGMTFVDLRDRYGTTQLVFNRDSAPAELCD 61

Query: 62  -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +  EWV+   G VM RS++  N NI TG IE++  ++++L+ +E  P  +  E + 
Sbjct: 62  RAEDLGREWVIRATGTVMERSSK--NPNIPTGDIEIAVGEMDVLNRSEVPPFTIEDETDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  +  N+  R R+   +R  +  E F+E  TP+L  S+PEGARDF
Sbjct: 120 GDDLRMKYRYLDLRRHCVRSNMELRHRMALEVRKYLDGEGFLEVETPMLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNPGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+L+T E + + +F    +   +S  F R+ + DA++ YG+DKPD R  +   
Sbjct: 239 MSFVEQEDVLSTFEGMAKHLFRTIRHVE-ISEAFPRMTWHDAMKYYGSDKPDTRFDMRFV 297

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
            + +     +F VF     +        I AKG G   R   D + ++ +         +
Sbjct: 298 ELMDVLKGHDFSVFDSAAYIG------GICAKGAGSYTRKQLDALTDFVKRPQVGAKGMV 351

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADARN 418
           + R++  G+V     V K       + +R  ++ + GD    ++GD L K      + R 
Sbjct: 352 YARVESDGSVK--SSVDKFYTQETLQELRRTMEAEPGDLILILSGDDLMKTRKQLCELRL 409

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  +LG+ + N F   W++DFP +EW+EE K+    H+PFT P+     L   D  +++
Sbjct: 410 EVGSQLGLRDKNKFSCLWVVDFPLFEWDEETKRFYAMHHPFTSPKPEDIPLLDTDPGAVR 469

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G IR H S +  + F  +G + E  + +FG L  AF+ G PPHGG
Sbjct: 470 ANAYDMVINGVEVGGGSIRIHDSALQQKMFELLGFTPEKAQEQFGFLMNAFKYGAPPHGG 529

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR V L  G  ++R+   FP +    D+++ +PS +   QL+EL L ++ N
Sbjct: 530 LAYGLDRWVSLFAGLDSIRDCIAFPKNNAGRDVMIDAPSVIDEAQLQELFLELIPN 585


>gi|257460371|ref|ZP_05625472.1| aspartyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257441702|gb|EEV16844.1| aspartyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 584

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 241/599 (40%), Positives = 343/599 (57%), Gaps = 22/599 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H C DL  +D+G  V + GWV+  R HGG+IF+D+RD  G+ Q+V +P  +   +E+A
Sbjct: 2   RSHYCTDLSKNDIGKSVTVCGWVNSYRDHGGVIFIDLRDRSGLLQLVCDPKDSHSAYEVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +VR+E+VL   G + +R     N N+ TG IE+  + +EI + ++ LP  V G++   E
Sbjct: 62  NTVRNEFVLKAVGKIRARGEGLENPNLKTGDIEVVVESLEIENPSKPLPF-VIGDKSVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             + KYRFLDLR +        R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ETKLKYRFLDLRAEGSFDKFKMRSKAAIAARNALDRLGFVEVETPILTRATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVYPGSFYALPQSPQLFKQLLMCSGFDKYFQIARCFRDEDLRADRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q D++   E VL+ +F+  S G  +   F  + Y DA+  YG+DKPDLR  +   +V
Sbjct: 240 FNTQYDVMRVAEEVLKDIFK--SCGREIVTPFRHMEYKDAMELYGSDKPDLRYDMPFIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGLAY 358
            + F  S   +FS +        V A+  K  GG+  F  R      E+ +  G  GLA+
Sbjct: 298 ADIFEKSSNEIFSNLAKDRKANRVKAL--KVEGGDLKFSKRQMQGFEEYVKKFGAQGLAF 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  ++ E G     GP+ K       + +  R  ++ GD  FF AG       +    R 
Sbjct: 356 I--QVKEDGL---KGPLVKFFEKSELDELIKRCGLKVGDVVFFGAGKKKIVLDYMGRFRI 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A ELG+I+ N  EF W+++FP +E N ++      H+PFTMP    E     DL  I 
Sbjct: 411 FLANELGLIDPNRLEFLWVVNFPMFEQN-DDGSYSAMHHPFTMPNNPDEP----DLEDIT 465

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H +++  + F  + I       +FG L  A   G PPHGG
Sbjct: 466 SIAYDVVLNGIELGGGSIRIHKADIQEKVFRLLKIEPAEQREKFGFLLDALSFGAPPHGG 525

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           IA G DR++ML+ G+ ++REV  FP +Q     L  +PS V+ EQLRELGLR+ +  +K
Sbjct: 526 IAIGFDRLMMLVTGSSSIREVIAFPKTQRAQCPLTKAPSVVTDEQLRELGLRLHKKEQK 584


>gi|224541604|ref|ZP_03682143.1| hypothetical protein CATMIT_00775 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525474|gb|EEF94579.1| hypothetical protein CATMIT_00775 [Catenibacterium mitsuokai DSM
           15897]
          Length = 594

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/596 (38%), Positives = 354/596 (59%), Gaps = 16/596 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+  RTH+ G+L ++DV   V L GWV + R  G ++F+D+RD +GITQV+   D +  E
Sbjct: 5   MNMNRTHNNGELRITDVNKKVELIGWVAKKRNLGALVFVDLRDRHGITQVIF--DESFNE 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K V++E++L I G V+ RS++  N ++ TG IE+ A++++I++ A   P+ +  E + 
Sbjct: 63  QLKDVKNEYILDIKGTVVERSSK--NPDMPTGDIEIQAEEVKIVNKAATTPMIIADETDA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR  L KNI++R +I+ ++   + +E F+E  TP L  S+PEGARDF
Sbjct: 121 LEETRMKYRYLDLRRPALQKNIMRRAKIVRAIHEYLDSEEFVEIETPYLNKSTPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFYALPQ+PQ +KQLLM +GF+RY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRVHNGSFYALPQSPQLFKQLLMVAGFERYYQIARCFRDEDLRADRQP-EFTQVDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+  D ++   E +++ V ++  N + V   F R+ + DA+  YG DKPD R  + + 
Sbjct: 240 MSFMNTDQVIGIGEGLIKKVMKDVMNID-VQLPFPRMTWHDAMETYGIDKPDTRFDLKLV 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAY 358
           N+ E     +F VF   L    G  V  +  KG   N  R   D + E A+     GLA+
Sbjct: 299 NLNETVKDVDFVVFKSALEA--GGHVKGLNVKGEADNYSRKKIDALTELAKKYKAKGLAW 356

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADAR 417
           +  ++ + G     GP+AK        A+  +++ + GD   F++    +  C   A  R
Sbjct: 357 L--KVTDKG---VSGPIAKFFTEEQMSALLEKMNAEVGDLLLFVSDTHYMVVCDALAAIR 411

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           NH+ +EL + +   F F W++DFP +E++EE+ +    H+PFT P+         D  + 
Sbjct: 412 NHLGKELKLYDPRQFNFLWVVDFPMFEYSEEDGRYYAMHHPFTRPKDSDLDKIDTDPANC 471

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NGFE+  G  R +  E+  +AF  +G ++E ++ +FG    AF+ G PPH 
Sbjct: 472 LADAYDIVLNGFELGGGSQRIYEEELQDRAFKALGFTQERIDAQFGWFVDAFRYGAPPHA 531

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G A G+DR  MLL G  ++R+V  FP + +    +  +P+ V  +QL++LG+ + E
Sbjct: 532 GFALGLDRFAMLLCGCDSLRDVIAFPKNTSATCPMSKAPTPVDNDQLKDLGIEVTE 587


>gi|225873931|ref|YP_002755390.1| aspartate--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|254781707|sp|C1FAE8|SYD_ACIC5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225793643|gb|ACO33733.1| aspartate--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 610

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 248/615 (40%), Positives = 346/615 (56%), Gaps = 43/615 (6%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           + RTH+CG+L  +  G  + + GWV+R R HG +IFLD+RD YGITQVV + D +    A
Sbjct: 8   KQRTHTCGELRAAHAGETITIMGWVNRRRDHGNLIFLDLRDRYGITQVVLDKDLSAEAHA 67

Query: 63  KS--VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           K+   R E+V+C  G V +RS E IN  + TG+IE++A ++ IL+ ++  P     E   
Sbjct: 68  KAEQARPEYVICATGKVRARSQEAINPKMPTGEIEIAATELLILNDSKVPPFSPAEEAIA 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  +  N   R ++  ++R  +  + F E  TP +T S+PEGARD+
Sbjct: 128 NEEVRLKYRYLDLRRPEMQHNFEVRHKVALAVRQYLSGQGFFEVETPFMTRSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQ+LM SG DRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 188 LVPSRVHPGEFYALPQSPQLFKQILMISGMDRYFQIARCFRDEDLRADRQP-EFTQIDLE 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F +Q+ I   +E  L   FE  + G  ++  F R+ YD AI  YG DKPDLR P  M 
Sbjct: 247 MTFPQQETIFGVVEGFLAAAFE--AVGQQITVPFPRMTYDKAIELYGIDKPDLRLP-PMT 303

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWA--IPAKGGGGN---RAFCDRMNEWA------- 348
           +V   F   E +     L + PG  + A  IP K    N   +AF   + E         
Sbjct: 304 DVRSVFSDEELQS----LKIEPGMPIVAIVIPNKSAMSNTQKKAFGKEVEEQVGAELAYL 359

Query: 349 ---RSQGQPGLAYIFWRLDESG----NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
              R +  P  A +  R+D +      +  + P   H  +V +  +      +D    + 
Sbjct: 360 DVERLRTSPQFALLADRIDAAAAAHCKLERVEP--DHRLVVISPRLGAAAVSRDTSWVYK 417

Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
            AG  L+       A  H A E      + ++F W+ DFPF+EW+E+     FAH+PFT 
Sbjct: 418 RAGQ-LRLELGKRFAAEHKAFEKKGTAAD-YQFLWVTDFPFFEWDEQSHTWTFAHHPFTS 475

Query: 462 PQ------GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           P       G +ES    D  +++A  YD+V NG E+ SG IR H  +V  Q F  +G+S 
Sbjct: 476 PHQDDLIAGRLES----DQAAVRALAYDVVLNGTELGSGSIRIHRQDVQQQIFRALGMSD 531

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
           +  + RFG    A Q G PPHGGIA G+DRIVM+L GA ++REV  FP +    DL++ +
Sbjct: 532 DEAKERFGFFLEALQYGTPPHGGIALGLDRIVMILAGASSLREVIAFPKTAKAIDLMVDA 591

Query: 576 PSTVSVEQLRELGLR 590
           P+ VS  QLREL +R
Sbjct: 592 PTPVSDAQLRELHIR 606


>gi|225023970|ref|ZP_03713162.1| hypothetical protein EIKCOROL_00837 [Eikenella corrodens ATCC
           23834]
 gi|224942995|gb|EEG24204.1| hypothetical protein EIKCOROL_00837 [Eikenella corrodens ATCC
           23834]
          Length = 602

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/596 (39%), Positives = 352/596 (59%), Gaps = 14/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F++A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFKLAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +++G+IE+ A++IEIL+ A   P  +  +    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMVSGKIEILAKEIEILNPAATPPF-MIDDENISET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R + R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLQNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF+E    +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKEALGVDL--GDFPRMPYSEAMFYYGSDKPDMRISLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRAAADMKGGRVVALRVPNGAKLSRKEIDEYTQFVGIYGAKGLAYIKVND 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              L    N     P+ K L+  + + I  R   Q+GD  FF   D  K  + A  A R 
Sbjct: 358 VTNLSNGENSGLQSPIVKFLSESSLQEIIKRTGAQNGDIIFF-GADKAKVVNEAIGALRI 416

Query: 419 HIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            I +E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D  
Sbjct: 417 KIGKEHGAENGYFVDEWKPLWVVDFPMFEYDEENDRWAAMHHPFTSPKPGHEDLMESDPE 476

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           +  A  YD+V NG+EI  G IR H +++  + F+ + I+ E  +N+FG L    + G PP
Sbjct: 477 NCLARAYDMVLNGWEIGGGSIRIHRADIQEKVFAALKITPEEQQNKFGFLLDNLKFGAPP 536

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG+A G+DR+V L+  A+++R+V  FP +Q   DLL+ +P+ V   QLREL LR+
Sbjct: 537 HGGLAFGLDRLVALMAQAESIRDVIAFPKTQRAQDLLVDAPNHVDELQLRELHLRL 592


>gi|294786980|ref|ZP_06752234.1| aspartate--tRNA ligase [Parascardovia denticolens F0305]
 gi|315226621|ref|ZP_07868409.1| aspartate--tRNA ligase [Parascardovia denticolens DSM 10105]
 gi|294485813|gb|EFG33447.1| aspartate--tRNA ligase [Parascardovia denticolens F0305]
 gi|315120753|gb|EFT83885.1| aspartate--tRNA ligase [Parascardovia denticolens DSM 10105]
          Length = 598

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 239/605 (39%), Positives = 347/605 (57%), Gaps = 39/605 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH C D+  + +G  V +SGWV R R HGG+ FLD+RD  G+ QVV   +    E+A+
Sbjct: 6   YRTHHCADITEAVIGQEVTISGWVDRRRDHGGVAFLDVRDASGLVQVVIYEE----EVAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG------E 117
            +RSE+V+ + G V  R     N ++ TG++E+ A+K+ +L+ +  LP  V        E
Sbjct: 62  PLRSEFVVQVTGDVRERPEGNENDHLATGKVEIVARKVTVLAKSAALPFQVSTALANETE 121

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E  R ++R+LDLRR  + +N+  R+ +  + R  +    F E  TP L  S+PEG
Sbjct: 122 EQLPGEDTRLRFRYLDLRRPQMQRNLRLRSNMARAARGELDKLGFTEVETPTLIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R++ GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLSPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294
           LDMEMSFV+Q+D++   E VL+ V+E  S G  V+  F RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMSFVDQEDVIAMAEQVLKAVWE--SAGYQVATPFPRITWTDAMNKYGSDKPDLRFG 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQ 353
           NP++  ++T++F  + FRVF           V A+  +G     R   D   EWAR +G 
Sbjct: 299 NPLV--DLTDYFKDTPFRVFQAPY-------VGAVVYQGAADLPRRQFDAWQEWARQRGA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAY+  +  E G +   GPVAK+L+    + +   +  Q GD+ FF AG         
Sbjct: 350 KGLAYV--QFSEDGVL--KGPVAKNLSDAERDGLMKAVHAQPGDAVFFAAGARESSQLLL 405

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464
             AR  IA+  G+++ + F F W++DFP ++  ++    D A         H+PFTMP  
Sbjct: 406 GAARVEIAKRQGLLHKDEFAFTWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSA 465

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D     +  YD+VCNG EI  G +R H  ++  +    +GI +E   ++FG 
Sbjct: 466 AWIDKFDQDPEHAMSDSYDIVCNGNEIGGGSVRIHRDDIQDRVLEVLGIGEEEARDKFGF 525

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPH GIA G DR   +L G  ++R+V  FP S    D L G+P+ +S EQ 
Sbjct: 526 LLEAFKYGAPPHAGIAFGWDRCAAILSGEDSIRDVIAFPKSGGGADPLTGAPAPISDEQR 585

Query: 585 RELGL 589
            E G+
Sbjct: 586 AETGV 590


>gi|15835443|ref|NP_297202.1| aspartyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285624|ref|ZP_06195018.1| aspartyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289634|ref|ZP_06195936.1| aspartyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301337020|ref|ZP_07225222.1| aspartyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13878783|sp|Q9PJK0|SYD_CHLMU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|7190856|gb|AAF39629.1| aspartyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 582

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 239/595 (40%), Positives = 347/595 (58%), Gaps = 20/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSAC 58
           +YRTH C +L ++ VG  VRLSGWVHR R HGG++F+D+RD +GITQ+V     NP+   
Sbjct: 2   KYRTHKCNELSLNHVGEHVRLSGWVHRYRNHGGVVFIDLRDRFGITQIVCRQEENPE--L 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
             +   VRSEWVLC++GLV +R     N N++TG IE+    +E+LS A+ LP  +  E 
Sbjct: 60  HRLMDQVRSEWVLCVEGLVCARLGGMENPNLVTGSIEVEVSHLEVLSRAQNLPFSISDEH 119

Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R  YR+LD+RR  +   ++ R +++ + R  +  + F E  TP+L  S+PEGA
Sbjct: 120 INVNEELRLTYRYLDMRRGDIVDRLMCRHKVMLACRQYLDEQGFTEVVTPVLGKSTPEGA 179

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSR+  G+FYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+
Sbjct: 180 RDYLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFSQI 238

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF   +D+   +E ++  +F     G  +S  F R+ Y +A   YGTDKPDLR  +
Sbjct: 239 DMEMSFGGPEDLFPIVEELVTRLFA--VKGIELSIPFQRMTYQEAKEFYGTDKPDLRFGL 296

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + N  E+     F +F   L+     + + +P  G   +R   D   ++ +  G  GL 
Sbjct: 297 RLKNCCEYAKKFSFSIFLDQLAQGGTVKGFCVPG-GADISRKQLDVYTDFVKRYGAMGLV 355

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-A 416
              W  ++ G ++    VAK  +      +    + +D D    IA  P    + + D  
Sbjct: 356 ---WIKNQDGGIS--SNVAKFASEEVFHEMFEAFEAKDQDILLLIAA-PEAIANQSLDHL 409

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  IA+E  + +   + F WI DFP +   +EE ++   H+PFT P      L   D LS
Sbjct: 410 RRLIAKERQLYDAEQYNFVWITDFPLF--AKEEGELCSEHHPFTAPLEEDIPLLDKDPLS 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +++  YDLV NG+EIASG  R H  ++  + FS + +S+E V+ +FG    A   G PPH
Sbjct: 468 VRSSSYDLVLNGYEIASGSQRIHNPDLQNKIFSLLRLSQESVKEKFGFFIDALSFGTPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GIA G+DRI+M+L GA+ +REV  FP +Q   DL+M +PS +   QL+ELGL++
Sbjct: 528 LGIALGLDRIMMVLTGAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582


>gi|224056291|ref|XP_002298795.1| predicted protein [Populus trichocarpa]
 gi|222846053|gb|EEE83600.1| predicted protein [Populus trichocarpa]
          Length = 667

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 243/597 (40%), Positives = 348/597 (58%), Gaps = 20/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT+ CG L ++DVG+ VRL GWV   R HGG+ F ++RDH GI QV   PD       I 
Sbjct: 78  RTNFCGQLSINDVGARVRLCGWVALHRVHGGLTFFNLRDHTGIVQVATLPDEFPDAHSII 137

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF----GE 117
             +R E+V+ ++G+V SR  E++N  + TG IE+ A+  ++L +V  +LP  V      +
Sbjct: 138 NDLRVEYVVVVEGVVRSRPVESVNKKMATGSIEVVAEHAQLLNAVKAKLPFLVTTVDDAK 197

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEG 176
               E IR +YR LDLRR  +  NI+ R R++  +R  +   + F+E  TPIL+ S+PEG
Sbjct: 198 DSVKEEIRLRYRCLDLRRQQMSSNIMLRHRVVKLIRRYLEDVQGFVEIETPILSRSTPEG 257

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR+  G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Q
Sbjct: 258 ARDYLVPSRIQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQ 316

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDME++F   +D+L   E+++R VF E   G  + N F R+ Y +A+ RYG+D+PD R  
Sbjct: 317 LDMELAFTPMEDMLRLNEDLIRKVFLEI-KGVQLPNPFPRLTYAEAMSRYGSDRPDTRFD 375

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAF--CDRMNEWARSQGQ 353
           + + +V++ F  S FRVF+  L      +V  +P+      N A    D  NE  +S G 
Sbjct: 376 LHLKDVSDIFSESSFRVFADSLKSGGIIKVLCVPSGAKSYSNTALKKGDIYNEAIKS-GA 434

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLA  F ++ ++G   G+  +   L+  N E +  R     GD   F  G         
Sbjct: 435 KGLA--FLKVLDNGEFEGISALLSSLDSTNKEQLLSRCSAGPGDLILFAVGHHSSVNKTL 492

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
              R  IA +LG+ + + +   W+ DFP +EWNE E++++  H+PFT P    E +K  D
Sbjct: 493 DRLRLFIANQLGLNDPSRYSILWVTDFPMFEWNETEQRLEALHHPFTAPNP--EDMK--D 548

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           L S +A  YD+V NG EI  G +R +  E+  +    VGI+ E  E +FG L  A   G 
Sbjct: 549 LSSARALAYDMVYNGVEIGGGSLRIYKREIQQKVLEIVGITPEQAEAKFGYLLEALDMGA 608

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           PPHGGIA G+DR+ MLL GA ++R+V  FP +      L  +PS V  +QL++L  R
Sbjct: 609 PPHGGIAYGLDRLAMLLAGANSIRDVIAFPKTTTAQCALTRAPSEVDPQQLKDLSFR 665


>gi|152993093|ref|YP_001358814.1| aspartyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|166225437|sp|A6QAE8|SYD_SULNB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|151424954|dbj|BAF72457.1| aspartyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 584

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/593 (38%), Positives = 348/593 (58%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTH C D+    +G  V ++GWV   R HGG+IF+D+RD   + Q+V +P  ++   +IA
Sbjct: 2   RTHYCADVNEQHIGETVTVAGWVASRRDHGGVIFIDLRDKDEVFQLVCDPADNADAHKIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR ++VL   G V +R     N N+ TG++E+    + I + ++ +P  +  E+   E
Sbjct: 62  EEVRDQFVLIATGKVRARGEGLENPNLKTGKVEMVVDSLTIENRSKPMPFELNDEK-VNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            I+ KYR+L+LR    +     R++   + R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 121 EIKLKYRYLELRTQKAYDTFKLRSKATIATRNALDELGFLEVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHGGEFYALPQSPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +Q+D++   E ++  VF     G  V   F R+ + +A+ +YG+DKPD+R  + M +V
Sbjct: 240 FCDQEDVITVAEKLISDVF--IKCGFDVPTKFNRMTHSEAMEKYGSDKPDMRYDLAMVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGLAY 358
            + F   +  +FS I  +     + A+  +   G+  F  R      ++ R  G  GL Y
Sbjct: 298 IDIFERCDNEIFSGIAKMPKKNRIKAL--RVPKGDEIFSKRQMKGFEDYVRKFGAQGLGY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
             +++ E G     GP+ K     + +AI  R  ++ GD+ FF AG+      +    R 
Sbjct: 356 --FQMKEDGL---KGPLTKFFTEDDIQAIIDRCGLEVGDAVFFGAGEKKLVWDYMGRFRI 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           ++A+ + II  + FEF W+MDFP +E   E+ K+   H+PFT P+    SL  ND+  I+
Sbjct: 411 YLAETMDIIPEDTFEFLWVMDFPMFEV--EDGKVKALHHPFTQPK----SLDFNDIEEIE 464

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H  +V  + F  +GIS+E  +++FG L  A + G PPHGG
Sbjct: 465 SIAYDVVLNGTELGGGSIRIHKEDVQEEVFKLLGISEEEAQSKFGFLLDALKFGAPPHGG 524

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            A G+DR++M++ GA ++R+V  FP +Q    LL  +PS V  EQL+EL +R+
Sbjct: 525 FALGLDRMIMIMTGASSIRDVIAFPKTQKAQCLLTQAPSEVDNEQLKELSIRV 577


>gi|187933861|ref|YP_001885235.1| aspartyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|238691638|sp|B2TN05|SYD_CLOBB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|187722014|gb|ACD23235.1| aspartate--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 599

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 244/602 (40%), Positives = 360/602 (59%), Gaps = 25/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+     VG  + L GWV R R  GG+ F+D+RD  GI QVV   +  S  FE A
Sbjct: 10  RTMMCGEPREEHVGQKITLMGWVQRNRKLGGLDFIDLRDKTGIMQVVFGEEINSEAFEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           KSVR E+ + + G V+ R  E++N N+ TG +EL  + ++ILS +E  P+ +    +  E
Sbjct: 70  KSVRPEYCIAVTGEVVKR--ESVNENMPTGFVELKCESLKILSESETPPIYIKENLDAAE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR  +H+    R++   S+R  +   +F++  TP+LT S+PEGARD+LV
Sbjct: 128 NIRLKYRYLDLRRPDMHRIFEIRSKTTKSIRDYLEKNDFLDVETPMLTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYRGMFYALPQSPQIFKQLLMVSGFDKYYQIVKCFRDEDLRANRQP-EFTQVDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDDI+   E ++  VF+E + G  V     R+ + DA+ +YG+DKPDLR  + + N+
Sbjct: 247 FVEQDDIMALNEGLIAHVFKEVA-GVDVKLPIKRMTFKDAMEKYGSDKPDLRFGMEITNI 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE     +F VF    ++  G  V A+  KGG    R   D++ E+ ++    GLA+I  
Sbjct: 306 TEDVKDMDFVVFKS--AIEAGGSVRALCLKGGATLGRKPLDKLGEFVKTYKAKGLAWI-- 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           +L E G  +    +AK L    T +I   +  + GD+   +A  + + F S  A  R  +
Sbjct: 362 QLKEDGVKSS---IAKFLTDDVTNSIIETMGAETGDAILIVADKESVVFQSLGA-LRLEL 417

Query: 421 AQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESLKGNDLL 475
           A++  +I + N F F WI +FP +E++EEE++    H+PFT P       +ES  G    
Sbjct: 418 AKQFELIKDKNEFNFTWITEFPLFEYSEEEERYTACHHPFTAPMEEDLEFLESAPGK--- 474

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            +++  YDLV NG E+  G IR H  E+  + F  +G ++E    RFG L +AF+ G PP
Sbjct: 475 -VRSKAYDLVLNGEELGGGSIRIHDMELQQRMFKALGFTEEQAWERFGFLLQAFKFGPPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGG+A G+DR++M L G +N+++V  FP +QN    L  +P+    +QL ELG+ I+   
Sbjct: 534 HGGLAFGLDRMIMFLAGTENIKDVIAFPKNQNAYCYLSEAPNIADEKQLTELGIGILPKQ 593

Query: 596 KK 597
           +K
Sbjct: 594 EK 595


>gi|118471914|ref|YP_887321.1| aspartyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|166225364|sp|A0QWN3|SYD_MYCS2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|118173201|gb|ABK74097.1| aspartyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 598

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 239/596 (40%), Positives = 338/596 (56%), Gaps = 28/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G L  +D G  V L+GWV R R HGG+IF+D+RD  G++QVV   +      A  
Sbjct: 3   RTHAAGSLRPADAGQTVTLAGWVARRRDHGGVIFIDLRDASGVSQVVFR-EGDVLAAAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R     N  I TGQIE++A ++ +L   E  PLP   + +  E  
Sbjct: 62  LRAEFCVAVTGVVEVRPEGNENPEIPTGQIEVNATELTVL--GESAPLPFQLDEQAGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+     +  R+++  + R  +   +F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRREGPGNALRLRSKVNAAARSVLAEHDFVEIETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           E DD++   E VL+ V+     G  +     RI Y++A+RR+G+DKPDLR  I +   TE
Sbjct: 239 EADDVIAISEQVLKAVWATI--GYDLPLPLPRISYEEAMRRFGSDKPDLRFGIELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+   GG    R   D   E+A+ +G  GLAY+   +
Sbjct: 297 YFKDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPVAK+L+    + +   +    GD  FF AG      +     R  IA+ 
Sbjct: 348 GEDGTLG--GPVAKNLSDAERDGLVAHVGANPGDCIFFAAGPAKGARALLGATRIEIAKR 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473
           L +I+ N + F W++DFP +E  +E     D A         H+ FT P+        +D
Sbjct: 406 LDLIDPNAWAFTWVVDFPMFEAADEATAAGDVAVGSGAWTAMHHAFTAPKPDSVDTFDSD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  +  YD+VCNG EI  G IR H  ++  + F+ +GI  +  + +FG L  AF  G 
Sbjct: 466 PGNALSDAYDIVCNGNEIGGGSIRIHRRDIQERVFAMMGIDHDEAQEKFGFLLDAFSYGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGGIA G DRI  LL G  ++REV  FP S    D L  +P+ ++ +Q +E G+
Sbjct: 526 PPHGGIAFGWDRITALLAGVDSIREVIAFPKSGGGVDPLTDAPAPITPQQRKESGI 581


>gi|172040629|ref|YP_001800343.1| aspartyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|238064704|sp|B1VDL1|SYD_CORU7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|171851933|emb|CAQ04909.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 606

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 249/607 (41%), Positives = 346/607 (57%), Gaps = 31/607 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L   D+ S V L+GWV R R HGG+IF+D+RD  G+ QVV   +S   E A +
Sbjct: 3   RTHLAGELRPGDIDSEVTLTGWVGRRRDHGGVIFIDLRDRSGVAQVVFR-ESEVAERAHA 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121
           +RSE+ + + G V +R   + N N+ +G +E++  ++E+L+ +  LP  +       E  
Sbjct: 62  LRSEYCVRVRGRVEARPEGSENPNLPSGAVEVNVSELEVLNESAALPFQIDDPSSAGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR +    +  R++   + R  +   +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRASQGDALRLRSKANAAARKVLERHDFTEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLKPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +L  V+   + G  V   F R+ Y DA+R YG+DKPDLR  I +  
Sbjct: 241 SFVDQEDVIALAEEILTEVWS--TAGYEVQTPFPRMTYADAMRLYGSDKPDLRFDIQITE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360
            TE F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAYI 
Sbjct: 299 CTEFFKDTTFRVFQNEY-------VGAVVMDGGASQPRRQLDAWQEWAKQRGAKGLAYIL 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G ++  GPVAK++       I   +  + GD  FF AGD     +    AR  I
Sbjct: 352 --VGEDGELS--GPVAKNITDDERAGIADHVGAKPGDCIFFAAGDTKSSRALLGAARGEI 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEK-KIDFA---------HNPFTMPQGGMESLK 470
           AQ+LG+I+ + + F W++D P +E   + + + D A         H+ FT P+       
Sbjct: 408 AQKLGLIDDSKWAFTWVVDAPMFEPAADARAEGDVALGNSAWTAVHHAFTSPKPEFLDSF 467

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  S  A+ YD+VCNG EI  G IR H  +V  + F  +GIS+E    +FG L  AF 
Sbjct: 468 DQDPGSALAYAYDIVCNGNEIGGGSIRIHQRDVQERVFQVMGISQEEAREKFGFLLDAFA 527

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +PS ++ EQ +E G  
Sbjct: 528 FGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPSEITPEQRKESG-- 585

Query: 591 IVENPKK 597
           I   PK+
Sbjct: 586 IDAKPKR 592


>gi|294056657|ref|YP_003550315.1| aspartyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293615990|gb|ADE56145.1| aspartyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 595

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/603 (39%), Positives = 364/603 (60%), Gaps = 21/603 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-K 63
           R+H C  L  SD GS V L+GWV  VR HGGI+F+D+RD  G+TQ+V +P +   E    
Sbjct: 3   RSHHCSQLRKSDAGSTVTLAGWVDSVRDHGGILFVDLRDREGLTQIVFDPANKELEAQFG 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122
           S++ E V+ + G V  R AE +N N+ TG IE+ A +++I +V++  P P+    +   E
Sbjct: 63  SIKPESVIAVSGTVQERIAEAVNPNLATGDIEVHAAELKIHNVSKTPPFPMDDSADKTSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            IR  YR+LDLRR + + NI++ R +   ++R  M  E F+E  TP+L  S+PEGAR+FL
Sbjct: 123 DIRMTYRYLDLRRSS-NLNILRLRHKTSQAIRNYMDEEAFVEVETPMLFKSTPEGAREFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G+FYALPQ+PQQYKQ+LM +G +RY+Q+A CFRDED R+DR P EF QLD+E+
Sbjct: 182 VPSRMNPGAFYALPQSPQQYKQMLMVAGVERYYQLARCFRDEDLRADRQP-EFTQLDIEL 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++++D+   +E +++ V+++  +   +   FLR+ Y DA+ R+G DKPD+R  + + +
Sbjct: 241 SFIDREDMYALIEGLMKRVWKDVLDVE-LETPFLRMSYFDAMNRFGVDKPDMRFDMELQD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360
               F +S F+VF   L  + G  + A  AKG     +     + + A+S G  GLA+I 
Sbjct: 300 CANIFANSGFKVFKGAL--DSGGAIKAFNAKGLADLTQGELRGLEDAAKSLGAKGLAFI- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               +S N     P+ K  +     A++ +L+++DGD  FF A +  + C+     R   
Sbjct: 357 ----KSENGEWKSPILKFFSDEEKAALKEQLNIEDGDIVFFAATEWERACTILGRVRLDA 412

Query: 421 AQELG-----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           AQ L       I+ + ++F W+++FP    +EE+ +   +H+PFT P      L  +D  
Sbjct: 413 AQLLVKRGKLTIDPSDYKFLWVIEFPLMLMDEEQGRFVASHHPFTAPVEEDIPLLDSDPK 472

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLYRAFQCGMP 534
            ++   YDLV NG E+  G IR H  +V  + F +V  I  +VVE+RFG + +AF+ G P
Sbjct: 473 KVRGQHYDLVLNGVELGGGSIRIHQPDVQKKVFEDVLKIEPDVVESRFGYMLKAFEYGAP 532

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+V +L    ++R+V  FP +Q   +++  SP   + +QLR+L ++ V  
Sbjct: 533 PHGGIAFGLDRMVTILAQRTSIRDVIAFPKNQKGQEMMTASPGIATDKQLRDLHVKAV-L 591

Query: 595 PKK 597
           PKK
Sbjct: 592 PKK 594


>gi|224437675|ref|ZP_03658622.1| aspartyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144122|ref|ZP_07806315.1| aspartyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129153|gb|EFR46770.1| aspartyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 579

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/589 (39%), Positives = 337/589 (57%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH C +L    +G  V++ GW +  R HGG+IF+D+RD  GI Q+V +P+S    IA S
Sbjct: 3   RTHLCAELNEKHIGKEVQVCGWCNTYRDHGGVIFIDLRDKSGIIQLVCDPNSQAHSIASS 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR E+VL   G + +R     N  + TG IE+  + + I + +   P+ + G+    E +
Sbjct: 63  VRDEYVLIAKGKIRARGEGLENPKLKTGMIEVVLESLVIENKSPTPPIAI-GDESVNEEL 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    +     R+    + R  +    F+E  TPILT ++PEGARD+LVPS
Sbjct: 122 RLKYRYLDLRSPKAYNIFKIRSDAAIAARNSLQKMGFLEVETPILTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMSF 
Sbjct: 182 RVHSGEFYALPQSPQLFKQLLMMSGFDKYFQIAKCFRDEDLRADRQP-EFTQIDIEMSFC 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQ+DI+   E +L+ +F   + G ++   F+R+ Y  A+  YG+DKPDLR  + +  V +
Sbjct: 241 EQNDIITMAETLLQDIF--VACGESIQTPFMRMPYTQAMESYGSDKPDLRFEMPLVEVGD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +F  I   +      A+  KGG     R       E+ R  G  GLAYI  +
Sbjct: 299 LFLDSNNEIFKNIAKDSKNNRFKALCVKGGDSFFTRKSLGEAEEFVRKFGAKGLAYIQVK 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E       GP+ K ++      +  R++ +  D  FF AG       +    R  IA 
Sbjct: 359 ENELK-----GPLVKFISESAMSELISRVEAEPNDIIFFGAGAKKVVWDYMGRLRLKIAM 413

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ++ +I+ N  +F W++DFP +E  +E+ K+   H+PFTMP+     L  +D+  I++  Y
Sbjct: 414 DMNLIDENMRKFLWVVDFPMFE--KEDGKVKALHHPFTMPK----DLDKDDVEEIESIAY 467

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H   +  + F  +GIS    +++FG L  A   G PPHGGIA G
Sbjct: 468 DVVLNGIELGGGSIRIHKDSIQKRVFELLGISNNEAQDKFGFLLEALSFGAPPHGGIAIG 527

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++MLL   +++R+V  FP +Q     L  +PS VS EQLR+L +R+
Sbjct: 528 FDRLIMLLAKTQSIRDVIAFPKTQKATCPLTLAPSAVSDEQLRDLHIRL 576


>gi|297798554|ref|XP_002867161.1| tRNA synthetase class II family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312997|gb|EFH43420.1| tRNA synthetase class II family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 664

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 240/597 (40%), Positives = 344/597 (57%), Gaps = 20/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG+L V DVG  VRL GWV   R HGG+ FL++RDH GI QV   PD       + 
Sbjct: 75  RTELCGELSVDDVGKSVRLCGWVALHRVHGGLTFLNLRDHTGIVQVRTLPDEFPEAHGLI 134

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGERE-- 119
             +R E+V+ ++G V SR  E++N  + TG +E+ A+ +EIL+ V  +LP  V    E  
Sbjct: 135 NDMRLEYVVLVEGTVRSRPNESVNKKMKTGFVEVVAEHVEILNPVRTKLPFLVTTADENK 194

Query: 120 --YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR-CRMIAENFIECSTPILTASSPEG 176
               E IR ++R LDLRR  +  NIV R  ++  +R C      FIE  TPIL+ S+PEG
Sbjct: 195 DLIKEEIRLRFRCLDLRRQQMKNNIVLRHNVVKLIRRCLEDRHGFIEIETPILSRSTPEG 254

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR+  G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Q
Sbjct: 255 ARDYLVPSRIQSGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQ 313

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM+F+  +D+L   E+++R VF E   G  + + F R+ Y DA+ RYG+D+PD R  
Sbjct: 314 LDMEMAFMPMEDMLKLNEDLIRKVFSEI-KGIQLPDPFPRLTYADAMDRYGSDRPDTRFD 372

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP---AKGGGGNRAFCDRMNEWARSQGQ 353
           + + +V+  F  S FRVF++ L      +V  +P    K         D  NE  +S G 
Sbjct: 373 LELIDVSNVFTESSFRVFTEALESGGIIKVLCVPLGAKKYSNSALKKGDIYNEAMKS-GA 431

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GL   F ++ ++G + G+  +   L+         +     GD   F  G         
Sbjct: 432 KGLP--FLKVLDNGEIEGIAALVSSLDSAGKINFVKQCGAAPGDLILFGVGPVTSVNKTL 489

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
              R  +A ++ +I+ +     W+ DFP +EWNE E++++  H+PFT P+   E +  +D
Sbjct: 490 DRLRLFVAHDMDLIDHSKHSILWVTDFPMFEWNEPEQRLEALHHPFTAPKP--EDM--DD 545

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           L S +A  YD+V NG EI  G +R +  +V  +    +GIS E  E++FG L  A   G 
Sbjct: 546 LPSARALAYDMVYNGVEIGGGSLRIYKRDVQEKVLEIIGISPEEAESKFGYLLEALDMGA 605

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           PPHGGIA G+DR+VM+L GA ++R+V  FP +      L  +PS V  +QL++L +R
Sbjct: 606 PPHGGIAYGLDRMVMMLGGANSIRDVIAFPKTTTAQCALTRTPSEVDPKQLQDLSIR 662


>gi|216264214|ref|ZP_03436206.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|225548601|ref|ZP_03769648.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|215980687|gb|EEC21494.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|225370631|gb|EEH00067.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 586

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 228/591 (38%), Positives = 352/591 (59%), Gaps = 12/591 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+ N +    +IA+
Sbjct: 2   FKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVN-EEKLLKIAE 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + I GL++ R    INAN+ TG  E+ A+ IEI+S   ELP  +  +    E+
Sbjct: 61  KIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + +YR+LDLRRD+L   I+ R +  + +R  +I   F+E  TP    S+PEGARDF++P
Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++++I   +EN+L  +F+   N N +   F +I Y  A+ +YG+DKPD R  + + +++
Sbjct: 240 VKKENIFKLIENMLFLIFKNCININ-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
            +  +SEF +F   L      ++  +  K    +RA  + + E A+     GL   F ++
Sbjct: 299 RNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY--FTKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422
           +   N    G +AK L     + ++    +++ D  FF A +  +  C      R  IA 
Sbjct: 357 E---NNKFSGGIAKFLKTEEQKLMKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIAN 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481
           +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+   + +L+ N   +I    
Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI- 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE +E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIV 582


>gi|226366319|ref|YP_002784102.1| aspartyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|254781747|sp|C1B4G8|SYD_RHOOB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226244809|dbj|BAH55157.1| aspartyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 602

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 241/603 (39%), Positives = 334/603 (55%), Gaps = 28/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L        V L+GWV R R HGG+IF+D+RD  G++QVV   + A  E A  
Sbjct: 3   RTHLAGSLRAEQAQQTVTLTGWVARRRDHGGVIFIDLRDASGVSQVVFR-EGAAAEQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R     N  I TG IE++  ++E+L+  E  PLP   + +  E  
Sbjct: 62  LRAEYCVKVTGVVEVRPEGNQNFEIPTGAIEVNVTELEVLN--ESAPLPFQLDDQAGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+     I  R+++  + R  +    F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRREGPGHAIRLRSKVNAAARAVLAHHEFVEVETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            QDD++   E VL  +++    G+ +     R+ Y +A+RRYG+DKPDLR  + +    E
Sbjct: 239 NQDDVILLAEEVLTSLWKLV--GHEIKTPIARMTYAEAMRRYGSDKPDLRFGVELVECAE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  + FRVF +         V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 297 FFTDTTFRVFQQEY-------VGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPVAK+L     + +   +  + GD  FF AG      +    AR  IA++
Sbjct: 348 GEDGTLG--GPVAKNLTDAERDGLAAHVGAKPGDCIFFAAGATKSSRALLGAARGEIARK 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473
             +I+ + + F WI+D P +E   +     D A         H+ FT P+         D
Sbjct: 406 QNLIDPDAWAFVWIVDAPLFEPTADATASGDVALGYSAWTAVHHAFTSPKPESIDTFDTD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  A+ YD+VCNG EI  G IR H  ++  + F  +GIS E  E +FG L  AF  G 
Sbjct: 466 PGSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFKVMGISHEEAEEKFGFLLDAFAFGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G DRI  LL G  ++REV  FP S    D L  +P+ ++ +Q +E G+    
Sbjct: 526 PPHGGIAFGWDRITALLAGVDSIREVIAFPKSGGGVDPLTSAPAPITAQQRKESGVDAKP 585

Query: 594 NPK 596
            PK
Sbjct: 586 EPK 588


>gi|314948060|ref|ZP_07851462.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|313645476|gb|EFS10056.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 589

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 234/592 (39%), Positives = 342/592 (57%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+     +EIA
Sbjct: 4   RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V  R    +N  + TG+ E+ A +I IL+  +  P  +  ++   +
Sbjct: 64  DKCRSEYVIEVTGEVRRRGENAVNPKMATGEFEVIASEIVILNQEKTPPFQIEDDQAISD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KNI  R     ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E   G  V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEV-RGIEVTLPFPRMTYDEAMARYGSDKPDTRFDMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++     EF+VF   +++  G  V A+ AKG     +R   D++ ++    G  GLA++ 
Sbjct: 302 SDTVKEVEFKVFQ--MALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G     GP+AK +    TEAI    D + GD   F A       +     R  +
Sbjct: 359 -KVEEDGL---KGPIAKFMGEA-TEAIIKATDAKPGDLLMFGADKSEIVAAALGAIRTRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP+     L   D   + A 
Sbjct: 414 GKELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  +    +G +KE +E +FG L  A   G PPHGGIA
Sbjct: 474 AYDIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQMEEQFGFLLTALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR  MLL G  N+REV  FP +    D++  +PS VS  QL EL + + 
Sbjct: 534 LGLDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585


>gi|227875436|ref|ZP_03993577.1| aspartate--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|306818747|ref|ZP_07452469.1| aspartate--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307701054|ref|ZP_07638079.1| aspartate--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|227843990|gb|EEJ54158.1| aspartate--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|304648433|gb|EFM45736.1| aspartate--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307614049|gb|EFN93293.1| aspartate--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 595

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 233/599 (38%), Positives = 341/599 (56%), Gaps = 32/599 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH CG+L + +    V L+GWV R R HGG+ F+D+RD  GI Q+V + D     + + 
Sbjct: 3   RTHKCGELTLKNDMETVTLTGWVDRRRDHGGVAFMDLRDASGIVQLVVSED-----VVRE 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--- 121
           VR+E+VL + G V  R     N  I TG+IE+ A+ +E+L+    LP  V    E     
Sbjct: 58  VRNEYVLKVTGKVRKRPDGNDNPEISTGEIEVVAEDVEVLNPCAPLPFQVSEHAEEAGKV 117

Query: 122 -ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YRF+DLRR  LH N+V R +I +  R  M    F+E  TP LT S+PEGARDF
Sbjct: 118 GEDVRLRYRFVDLRRRQLHDNLVLRAKISSVARRVMEKHEFLEIETPTLTRSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R+  GS+YALPQ+PQ +KQLLM  G +RY+Q+A C+RDED R+DR P EF QLD+E
Sbjct: 178 VVPARIKPGSWYALPQSPQLFKQLLMVGGMERYYQLARCYRDEDSRADRQP-EFTQLDLE 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++   E++L+ V+     G  +     R+ + +A+ +YG+DKPDLR    + 
Sbjct: 237 MSFVDQDDVMAVTEDLLKEVWAVI--GYDLKTPIPRMPFKEAMDKYGSDKPDLRFGYELV 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +TE+F  + F++F       P      +P       R F D+  EWA+++G  GLAY+ 
Sbjct: 295 ELTEYFSDTPFKIFQA-----PYVGAVVMPGGAAQPRRTF-DKWQEWAKARGAKGLAYV- 347

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G  A  GPVAK+++    E +      + GD  FF AG+          AR  I
Sbjct: 348 -TIAEDGTTA--GPVAKNISDTEREGLAEVTGAKPGDCIFFAAGERTASQELLGAARLEI 404

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWN-EEEKKIDFA---------HNPFTMPQGGMESLK 470
            +  G+I+   + F W++D P ++ + + E + D A         H+ FT P+       
Sbjct: 405 GKRCGLIDPKAWAFTWVVDAPLFKPSGQAEAEGDVALGHSAWTAVHHAFTSPKPECMDTF 464

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  S  A+ YD+VCNG E+  G IR H  +V  + F  +G S E  + RFG L  AF+
Sbjct: 465 DTDPGSALAYAYDIVCNGVELGGGSIRVHRRDVQERIFKVMGFSPEEAQARFGFLLDAFK 524

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            G PPHGG+A G DRI  +L  + ++R+V  FP + +  D L G+P+ ++ EQ +E G+
Sbjct: 525 YGAPPHGGLALGWDRIAGMLTASPSIRDVIAFPKAGDGFDPLTGAPAPITDEQRKETGV 583


>gi|296436075|gb|ADH18249.1| aspartyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437003|gb|ADH19173.1| aspartyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|296437936|gb|ADH20097.1| aspartyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140436|gb|ADH97194.1| aspartyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 582

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 239/595 (40%), Positives = 347/595 (58%), Gaps = 20/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSAC 58
           +YRTH C +L +  VG  VRLSGWVHR R HGG++F+D+RD +GITQ+V     NP+   
Sbjct: 2   KYRTHKCNELSLDHVGEHVRLSGWVHRYRNHGGVVFIDLRDCFGITQIVCRQEENPE--L 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            ++   VRSEWVLC++GLV +R     N N++TG IE+    +E+LS A+ LP  +  E 
Sbjct: 60  HQLMDQVRSEWVLCVEGLVCARLEGMENPNLVTGSIEVEVSSLEVLSRAQNLPFSISDEH 119

Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R  YR+LD+RR  +   ++ R +++ + R  +  + F E  TPIL  S+PEGA
Sbjct: 120 INVNEELRLTYRYLDMRRGDILDRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGA 179

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSR+  G+FYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+
Sbjct: 180 RDYLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFTQI 238

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF   +D+   +E ++  +F     G  +   FLR+ Y +A   YGTDKPDLR  +
Sbjct: 239 DMEMSFGGPEDLFPVVEELVARLFA--VKGIELKAPFLRMTYQEAKDSYGTDKPDLRFGL 296

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + N  E+     F +F   L+     + + +P  G   +R   D   ++ +  G  GL 
Sbjct: 297 RLKNCCEYARKFTFSIFLDQLAYGGTVKGFCVPG-GADMSRKQLDIYTDFVKRYGAMGLV 355

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-A 416
              W   + G V+    VAK  +    + +    + +D D    IA  P    + A D  
Sbjct: 356 ---WIKKQDGGVS--SNVAKFASEDVFQEMFEAFEAKDQDILLLIAA-PEAVANQALDHL 409

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  IA+E  + +   + F WI DFP +   +EE ++   H+PFT P     SL  +D  +
Sbjct: 410 RRLIARERQLYDSTQYNFVWITDFPLF--AKEEGELCPEHHPFTAPLDEDISLLDSDPFA 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +++  YDLV NG+EIASG  R H  ++  + F+ + +S+E V+ +FG    A   G PPH
Sbjct: 468 VRSSSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFGFFIDALSFGTPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GIA G+DRI+M+L  A+ +REV  FP +Q   DL+M +PS +   QL+ELGL++
Sbjct: 528 LGIALGLDRIMMVLTRAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582


>gi|226321078|ref|ZP_03796620.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233488|gb|EEH32227.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 586

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/592 (38%), Positives = 351/592 (59%), Gaps = 12/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+ N +    +IA+
Sbjct: 2   FKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLIN-EEKLLKIAE 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + I GL++ R    INAN+ TG  E+ A+ IEI+S   ELP  +  +    E+
Sbjct: 61  KIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + +YR+LDLRRD+L   I+ R +  + +R  +I   F+E  TP    S+PEGARDF++P
Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++++I   +EN+L  +F+   N N +   F +I Y  A+ +YG+DKPD R  + + +++
Sbjct: 240 VKKENIFKLIENMLFLIFKNCININ-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
            +  +SEF +F   L      ++  +  K    +RA  + + E A+     GL   F ++
Sbjct: 299 RNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY--FTKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422
           +   N    G +AK L     E ++    +++ D  FF A +  +  C      R  IA 
Sbjct: 357 E---NNKFSGGIAKFLKTEEQELMKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIAN 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481
           +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+   + +L+ N   +I    
Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI- 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F  +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFKIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV+
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583


>gi|93006011|ref|YP_580448.1| aspartyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|123264609|sp|Q1QBI9|SYD_PSYCK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|92393689|gb|ABE74964.1| aspartyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 608

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 232/602 (38%), Positives = 357/602 (59%), Gaps = 20/602 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIA 62
           YR   CG +  S +   + + GWVHR R HGG+IFLD+RD  GI QVV +PD+   F IA
Sbjct: 6   YRDEYCGAVTESLIEQTISVVGWVHRRRDHGGVIFLDMRDRAGILQVVVDPDTPEAFAIA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
            +VR E+V+ I G V  R A T NAN+ +G IEL A++IE+L+ +E  P P+  E+    
Sbjct: 66  DAVRPEYVIKITGRVRQRYAGTENANMTSGHIELLAKEIEVLAKSETPPFPLNDEKSTVS 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LD+RR  +   +V R +  +++R  +    F++  TPILT ++PEGARD+L
Sbjct: 126 EDLRLKYRYLDMRRPQMQDRMVFRAKATSAIRRYLDDHGFLDVETPILTRATPEGARDYL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E 
Sbjct: 186 VPSRTRPGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIET 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ +++I+N  E +++ VF+     +     F R+ Y +A+R Y +DKPDLR P+ + +
Sbjct: 245 SFLNEEEIMNINEGLIKHVFKTMM--DVEFEQFPRMTYAEAMRDYASDKPDLRIPLKLID 302

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V +     +F+VF+   + +P   V A+   GG   +R   D   ++    G  GLAYI 
Sbjct: 303 VADLMKDVDFKVFAGPAN-DPKGRVAALRIPGGASLSRKQIDAYTKFVSIYGARGLAYI- 360

Query: 361 WRLDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
            +++++ N+       +G+  P+ K++      ++  R   +  D  FF A         
Sbjct: 361 -KVNDASNINNGVDKESGLQSPIIKNMTDDVLVSLIERTGAESNDIIFFGADKASVVNDA 419

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               R  I  +L +  C  +   W+ DFP +E  E+ +     H+PFT P+G +E LK N
Sbjct: 420 IGALRQKIGLDLEMTTCE-WAPLWVTDFPMFEETEDGRWTSM-HHPFTKPKGSVEELKTN 477

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
              ++ +  YD+V NG E+  G +R +  E+    F  +GI  +  E++FG L  A + G
Sbjct: 478 PESAL-SIAYDMVLNGTEVGGGSLRINTLEMQTAVFEALGIDDQEAEDKFGFLLDALKFG 536

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V+ +QLRELG+R+ 
Sbjct: 537 APPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTAECPLTQAPAEVNTKQLRELGIRVR 596

Query: 593 EN 594
           E 
Sbjct: 597 EK 598


>gi|329120697|ref|ZP_08249359.1| aspartate--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327460494|gb|EGF06830.1| aspartate--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 602

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 237/596 (39%), Positives = 350/596 (58%), Gaps = 14/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F++A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFKLAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +++G+IE+ A++IEIL+ A   P  +  +    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMVSGKIEILAKEIEILNPAATPPF-MIDDENISET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R + R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLQNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF+E         +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKEALGVEL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKLSRKEIDEYTQFVGIYGAKGLAYIKVND 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              L    N     P+ K L+  +   I  R   Q+GD  FF A D  K  + A  A R 
Sbjct: 358 VSNLSNGENSGLQSPIVKFLSESSLHEIIKRTGAQNGDIIFFGA-DKAKVVNEAIGALRI 416

Query: 419 HIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            I +E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D  
Sbjct: 417 KIGKEHGAENGYFVDEWKPLWVVDFPMFEYDEENDRWAAMHHPFTSPKPGHEDLMESDPE 476

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           +  A  YD+V NG+EI  G IR H +++  + F+ + IS E  + +FG L    + G PP
Sbjct: 477 NCLARAYDMVLNGWEIGGGSIRIHRADIQEKVFAALKISPEEQQEKFGFLLDNLKFGAPP 536

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P  V  +QLRELGLR+
Sbjct: 537 HGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPGAVDDKQLRELGLRL 592


>gi|126700354|ref|YP_001089251.1| putative aspartyl-tRNA synthetase [Clostridium difficile 630]
 gi|255101910|ref|ZP_05330887.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255307779|ref|ZP_05351950.1| putative aspartyl-tRNA synthetase [Clostridium difficile ATCC
           43255]
 gi|115251791|emb|CAJ69626.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Clostridium difficile]
          Length = 595

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/592 (37%), Positives = 344/592 (58%), Gaps = 16/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RTH CG+L   ++   V L GWV + R  GG++F+D+RD  G+ Q+V   + D   FE A
Sbjct: 9   RTHYCGELREKNINEEVVLMGWVQKKRNLGGLVFVDLRDTSGLCQIVFDTDVDKEAFEKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +E+V+ + G V  R ++  N N+ TG IE+ A ++ +L+ +E  P+ +  + +  E
Sbjct: 69  EKLGAEFVIAVKGKVCERQSK--NPNMPTGDIEIFATELRLLNKSETPPIYIKDDDDVSE 126

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLR+ ++ +N+  R +++N  R  +    F E  TP L A +PEGARD+LV
Sbjct: 127 ALRLKYRYLDLRKPSMQRNLKLRHKVMNITRNYLSNNRFCEIETPFLIAPTPEGARDYLV 186

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ YKQLLM SG DRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 187 PSRVNPGKFYALPQSPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 245

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQ+D+++ +E +L  +F+E  +   ++    ++ Y +A+ +YG+DKPD R    + ++
Sbjct: 246 FVEQEDVMSMIEGLLEAIFKEVLDVE-LALPLPKMTYAEAMSKYGSDKPDTRFGYELTDI 304

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           ++   +  F+VF+   +  PG  V  I  KG   +  R     + E A++    GLA++ 
Sbjct: 305 SDVVCNCGFKVFAD--ATQPGKSVRGINVKGKADDFTRKQISSLEEHAKTYRAKGLAWM- 361

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               + G      P+AK  N     AI  R++ + GD   F+A             R  +
Sbjct: 362 ----KVGQEGVTSPIAKFFNEEEMNAILTRMNAEVGDLLLFVADKNSIVFDALGQVRLEV 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
           A  L +++ N +   W+ +FP +E +EE       H+PFT P    ++ L+  D  S++A
Sbjct: 418 ANRLNLLDKNVYNLLWVTEFPVFEEDEETGTFSAMHHPFTSPMDEDLDKLEEGDKSSLRA 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R   S+V  + F  +G ++E    +FG L  AF+ G PPH G+
Sbjct: 478 KAYDIVLNGYEIGGGSVRISNSDVQSRMFKALGFTEERANEKFGYLLEAFKYGTPPHAGL 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL G  N+REV  FP +QN    +  +P+    EQL EL +++
Sbjct: 538 AFGLDRLVMLLAGTDNIREVIAFPKNQNAVCPMTNAPTLAEDEQLEELSIKV 589


>gi|295112123|emb|CBL28873.1| aspartyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 608

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 244/593 (41%), Positives = 342/593 (57%), Gaps = 15/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CGD    D G  VR +GWV R R  GGIIF+++ DH G  QVV NP++      A 
Sbjct: 21  RTKLCGDFSREDAGREVRANGWVRRRRDLGGIIFIELWDHTGSVQVVFNPEAGDVHGAAG 80

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYP 121
            +RSE+ + + G +  R   T N  + TG +E+ AQ + ILS A  +P  V GE   +  
Sbjct: 81  GLRSEYCVAVRGKLRIRPEGTENPGLKTGAVEIVAQDLLILSKASPIPFEV-GEATDDVD 139

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R  YR+LDLRR+ +  N+  R+RI    R  +  + F+E  TPILT ++PEGARD+L
Sbjct: 140 ENLRLTYRYLDLRRERMQNNLRTRSRINAFTRRYLEGQGFVELETPILTKATPEGARDYL 199

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  G+FYALPQ+PQ +KQ+LM SGFDRY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 200 VPSRVTPGTFYALPQSPQLFKQILMVSGFDRYYQIARCFRDEDLRADRQP-EFTQVDIEM 258

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           S+V +DD++  +E  ++G+F+E   G  V   F R+ Y DA+ RYG+DKPDLR  + + +
Sbjct: 259 SYVVEDDVMELIEGYMKGLFKEVL-GVDVPTPFGRMLYWDAMDRYGSDKPDLRVTLELCD 317

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V   F  + F  F ++L  + G  V A+P  GG   +R     + + AR  G  GLA   
Sbjct: 318 VASVFAKASFEPFKQVL--DGGGVVRALPLPGGAALSRKELMDLEDRARKFGASGLAA-- 373

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA-GDPLKFCSFAADARNH 419
           +++ E    A  GP+ K L     E +    +++DGD+ F +A     + C+     R  
Sbjct: 374 FQMKEG---ALKGPLVKFLTEGELEELCRIANLKDGDALFVLADASRARACTILGVLRLD 430

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +  G +N   + F W+  FP +EW++EEK+    H+PFT P      L   D     A
Sbjct: 431 LGRSRGFMNEKEWRFLWVTKFPLFEWSDEEKRWVAMHHPFTSPVLEEGDLMERDPSKALA 490

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD V NG E+  G IR H  EV  + F  +GIS E  + RFG    A   G PPHGGI
Sbjct: 491 RAYDCVLNGNEVGGGSIRIHDPEVQARLFKCLGISPEEAKRRFGFFLNALSYGTPPHGGI 550

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VMLL G +++R+V  FP +Q    LL  +P  V   +L EL + +V
Sbjct: 551 ALGVDRLVMLLCGGQSIRDVMTFPKTQRAQCLLSQAPDVVEQSRLDELRIAVV 603


>gi|315604270|ref|ZP_07879336.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313976|gb|EFU62027.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 601

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/599 (39%), Positives = 341/599 (56%), Gaps = 31/599 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G LG   +G  V L+GWV R R HGG+ F+D+RD  GI QVV   +     +A  
Sbjct: 3   RTHNIGTLGTDLIGQTVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVVRDE----RVAHE 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----Y 120
           +RSE+VL + G V +R     N ++ TG IE+    IEI + +  LP  V    E     
Sbjct: 59  LRSEFVLKVTGEVAARPEGNENPHLATGAIEVMGDDIEIFNTSAPLPFQVSSNAEDSGNV 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR+     I  R+++  + R  + A +F+E  TP LT S+PEGARDF
Sbjct: 119 GEETRLKYRYLDLRREPEQYAIRLRSKVSRAAREALYARDFVEIETPTLTRSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R++ GS+YALPQ+PQ +KQLLM +G +RYFQIA C+RDED R+DR P EF QLD+E
Sbjct: 179 IVPARLSPGSWYALPQSPQLFKQLLMVAGMERYFQIARCYRDEDFRADRQP-EFTQLDIE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD++   E+VL+ V+     G  ++    R+ Y DA+ R+G+DKPDLR  + + 
Sbjct: 238 MSFVEQDDVIEVAEDVLKNVWALI--GYDLATPIPRMTYRDAMERFGSDKPDLRFGLELT 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +T++F  + FRVF       P      +P  G    R F D+  EWA+++G  GLAY+ 
Sbjct: 296 ELTDYFKDTPFRVFQA-----PYVGAVVMPGGGSQPRRTF-DKWQEWAKARGAKGLAYV- 348

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +   GPVAK+++    E +      + GD  FF AG P         AR  I
Sbjct: 349 -TIAEDGTLG--GPVAKNISESEREGLVEATGAEPGDCIFFAAGKPTPSRELLGAARLEI 405

Query: 421 AQELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLK 470
            +   +I+ + + F W++D P ++   + E + D A         H+ FT P+       
Sbjct: 406 GKRCDLIDPDAWAFTWVVDAPLFKPTGDAEAEGDVALGHSAWTAVHHAFTSPKPEWMDSF 465

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D     A+ YD+VCNG EI  G IR H  +V  + F  +GI +E  + +FG L  AF+
Sbjct: 466 DRDPAHALAYAYDIVCNGNEIGGGSIRIHRRDVQNRVFDVMGIGEEEAQAQFGFLLDAFK 525

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            G PPHGG+A G DRIV LL  ++++R+V  FP S    D L  +P+ ++  Q +E G+
Sbjct: 526 FGAPPHGGVAFGWDRIVSLLTKSESIRDVIAFPKSGGGFDPLTEAPAPITPAQRKEAGV 584


>gi|331697356|ref|YP_004333595.1| aspartyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326952045|gb|AEA25742.1| aspartyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 594

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 240/590 (40%), Positives = 335/590 (56%), Gaps = 19/590 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+IF+D+RD  G  QVV   +    E A  
Sbjct: 2   RTHPAGTLRADHAGQTVTLAGWVARRRDHGGVIFIDLRDSSGSAQVVFR-EGEMAERAHR 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+ + G V  R A   N  + TG+IE+ A  + +LS +  LP P+    E  E I
Sbjct: 61  LRSEFVVQVTGEVARRPAGNENPELATGEIEVLATDLTVLSESAPLPFPIDDHTEVGEEI 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R K+R+LDLRR      +  R+      R  +   +F+E  TP LT S+PEGARDFLVP+
Sbjct: 121 RLKHRYLDLRRTGPAAALRMRSEANRIARTVLHERDFVEVETPTLTRSTPEGARDFLVPA 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 181 RLRPGSWYALPQSPQLFKQLLMVAGTERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            QDD++   E V   ++ E + G  +     R+ Y +A+ RYG+DKPDLR  I +  +TE
Sbjct: 240 SQDDVIELGEAVTAALWRELA-GYEIPLPIPRMTYAEAMARYGSDKPDLRFGIELTELTE 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+   GG    R   D   EWAR +G  GLAY+   +
Sbjct: 299 YFSATSFRVFQADY-------VGAVVMPGGASQPRRQFDAWQEWARQRGARGLAYV--TV 349

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPVAK+L+ V  + +   +    GD+ FF AG P    +    AR  IA+ 
Sbjct: 350 GEDGTLG--GPVAKNLSDVERDGLAKAVGADPGDAIFFAAGHPSDARALLGAARGEIARR 407

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA----HNPFTMPQGGMESLKGNDLLSIKA 479
           +G+++ + + F WI+D P +E   ++K  +      H+PFT P                A
Sbjct: 408 VGLVDESAWSFVWIVDAPMFERVRDDKGEEIGWTAVHHPFTSPNEDWLDRFEEAPDQALA 467

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           + YD+V NG EI  G IR H S+V  + F+ +G+ +   + +FG L  AFQ G PPHGGI
Sbjct: 468 YAYDIVANGNEIGGGSIRIHRSDVQQRVFALLGMDEAEQQEKFGFLLDAFQYGPPPHGGI 527

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G DRI MLL GA+++R+V  FP +    D L  +P+ ++  Q +E G+
Sbjct: 528 AFGWDRICMLLSGAESLRDVIAFPKTGGGFDPLTQAPAPITAAQRKEAGV 577


>gi|317401441|gb|EFV82073.1| aspartyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 595

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/594 (39%), Positives = 343/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT   G +    +G  V L GWV+R R HGG+IF+D+RD  G+ Q+V +PD+A F  A+ 
Sbjct: 2   RTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRAGLAQIVFDPDNAAFATAER 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + GLV  R A T NA + +G+IE+  +++EIL+ +   P  +  +    E+ 
Sbjct: 62  LRNEFCIRVTGLVRERPAGTANAELASGEIEVLCKEVEILNASVTPPFQL-DDDNLSETT 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  +R LDLRR  + +N++ R R+    R  +    FI+  TP+L  S+PEGARD+LVPS
Sbjct: 121 RLTHRVLDLRRPQMQRNLMLRYRVSIETRKFLDQLGFIDIETPMLAKSTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF+
Sbjct: 181 RVNAGHFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSFL 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            + +I    EN++R VF+    G  ++  F  + + +A+RRYG+DKPDLR  +   ++T+
Sbjct: 240 NELEIREIFENMIRHVFK-VVQGVDLAEPFPIMTWTEAMRRYGSDKPDLRVQLEFTDMTD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363
                +F+VF+   +  PG  V A+   GG   +R+  D   ++    G  GLAYI    
Sbjct: 299 VMRDVDFKVFAAAATA-PGSRVVALRVPGGAEMSRSEIDAYTQFVGIYGAKGLAYIKVNE 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+      +  R   QDGD  FF A D  K  + A  A       
Sbjct: 358 VAKGRDGLQSPIVKNLHDAALAELVKRTGAQDGDIIFFGA-DREKVVNDAIGALRVKIGH 416

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   ++ G+         W++DFP +E++EE+ +   AH+PFT P+ G E     D    
Sbjct: 417 SEFGKKTGLFTAGWMPL-WVVDFPMFEYDEEDGRYTAAHHPFTSPKDGHEDFLETDPSKA 475

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E    +FG L  A Q G PPHG
Sbjct: 476 FAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAREKFGYLLDALQYGAPPHG 535

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DRIV ++ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+
Sbjct: 536 GIAFGLDRIVTMMTGAESIRDVIAFPKTQRAQDLLTQAPSEVDEKQLRELHIRL 589


>gi|300934546|ref|ZP_07149802.1| aspartyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 596

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 242/599 (40%), Positives = 338/599 (56%), Gaps = 29/599 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L   ++G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +S   E A  
Sbjct: 3   RTHLAGELRPENIGQEVTLTGWVGRRRDHGGVIFIDMRDRSGVAQVVFR-ESEVAERAHD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121
           +RSE+ + + G+V +R   + N N+ +G IE++   +E+L+ +  LP  +       E  
Sbjct: 62  LRSEYCIKVTGVVEARPEGSENPNLPSGGIEVNVTDLEVLNASAALPFQIDDPSSAGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR      +  R+++  + R  +   +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRKAQGDALRLRSKVNAAARGVLARHDFTEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLKPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +L  +++E   G  +S    R+ Y DA+R YG+DKPDLR  I +  
Sbjct: 241 SFVDQEDVIALAEEILVAIWKEI--GYEISTPIPRMTYADAMRLYGSDKPDLRFDIQITE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360
            TE F  + FRVF           V A+  +GG    R   D   EWA+ +G  GLAYI 
Sbjct: 299 CTEFFKDTTFRVFQNEY-------VGAVVMEGGASQPRRQLDAWQEWAKQRGAKGLAYIL 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G ++  GPVAK++       I   +  + GD  FF AGD     +    AR  I
Sbjct: 352 --VGEDGELS--GPVAKNITDAERAGIANHVGAKPGDCIFFAAGDTKSSRALLGAARGEI 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLK 470
           A++LG+I    + F W++D P +E   +     D A         H+ FT P+       
Sbjct: 408 AEKLGLIKEGDWAFTWVVDAPLFEPAADATASGDVALGNSAWTAVHHAFTSPKPEYLDTF 467

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  S  A+ YD+VCNG EI  G IR H  ++  + F  +GIS+E    +FG L  AF 
Sbjct: 468 DEDPGSALAYAYDIVCNGNEIGGGSIRIHRHDIQERVFKVMGISEEEAREKFGFLLDAFA 527

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P  +S  Q +E G+
Sbjct: 528 FGAPPHGGIAFGWDRIVSLLGGFSSIRDVIAFPKSGGGVDPLTDAPGEISAAQRKESGI 586


>gi|254368450|ref|ZP_04984467.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157121344|gb|EDO65545.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 592

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 225/590 (38%), Positives = 345/590 (58%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+        V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 4   RTHYSSDINEKLQRQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 64  LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 123

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 124 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 183

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 184 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 242

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E + G   +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 243 DEAFIMSTMERMIAGLFKE-TIGVEFATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 301

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 302 DMQNEEFKVFSGPAN-DPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++ D  FF AG            R  I +
Sbjct: 361 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEDDLLFFGAGKTKIVNDSMGALRAKIGE 420

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E  +++ ++   H+PFT P+   +E L   +   + +  
Sbjct: 421 DLDLFNKD-WAPLWVVDFPMFE--KDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS +    +FG +  A   G P HGGIA 
Sbjct: 478 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ +
Sbjct: 538 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAV 587


>gi|254432783|ref|ZP_05046486.1| aspartyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197627236|gb|EDY39795.1| aspartyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 606

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 234/604 (38%), Positives = 345/604 (57%), Gaps = 30/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H CGDL     G  V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSHGCGDLRQDVTGQEVQLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGADAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119
           + +R+E V+ + G V  R A+ IN  + TG +E+ A  I +L SV   LP PV    E  
Sbjct: 62  EHLRNETVIQVTGTVRGRPADAINDKLATGHVEVLASAIGVLNSVKGNLPFPVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR+ ++ N++ R R I + R  +  + FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRERMNGNLLLRARTIQAARRFLEDQGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLDM
Sbjct: 182 YLVPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q+ IL   E ++  +++    G  +   F R+ + +A+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQEQILELNEALIAHIWKAV-KGVELPRPFPRLTWQEAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351
             V++      F+VFS  ++     +  A+P    GGN A          D  +E A+  
Sbjct: 300 VTVSDLVADMGFKVFSGAVAAGGAVKCIAVP----GGNDAVSNVRIKPGGDVFSE-AQKA 354

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLA+I  R+ E G +  +G +  +L       +  R   + G    F AGD      
Sbjct: 355 GAGGLAFI--RVREGGEIDTIGAIRDNLTDDKKAELLARTGAEAGTLLLFGAGDTATVNK 412

Query: 412 FAADARNHIAQELGIINCNC----FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ---- 463
                R ++A+ELG++  +     + F W++DFP +E+N EE +++  H+PF  P     
Sbjct: 413 ALDRVRQYLARELGMVQPDSANDRWNFLWVVDFPMFEFNAEENRLEALHHPFCAPNPGDL 472

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
           G   +   + L + +A  YDLV NG E+  G +R H S +  Q    +G+  E  E +FG
Sbjct: 473 GADPAAWADTLPTARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTIGLPLEEAEAQFG 532

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            L  A   G PPHGG+A G+DRIVMLL G +++R+   FP +Q    L+  +P+ VS +Q
Sbjct: 533 FLMEALDMGAPPHGGLAFGVDRIVMLLAGEESIRDTIAFPKTQQARCLMTQAPAGVSPQQ 592

Query: 584 LREL 587
           L EL
Sbjct: 593 LEEL 596


>gi|111024079|ref|YP_707051.1| aspartyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|123045357|sp|Q0S0P3|SYD_RHOSR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110823609|gb|ABG98893.1| aspartate--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 602

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 241/603 (39%), Positives = 333/603 (55%), Gaps = 28/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L        V L+GWV R R HGG+IF+D+RD  G++QVV   + A  E A  
Sbjct: 3   RTHLAGSLRAEQAQQTVTLTGWVARRRDHGGVIFIDLRDASGVSQVVFR-EGAAAEQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R     N  I TG IE++   +E+L+  E  PLP   + +  E  
Sbjct: 62  LRAEYCVKVTGVVEVRPEGNQNFEIPTGAIEVNVTDLEVLN--ESAPLPFQLDDQAGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+     I  R+++  + R  +    F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRREGPGHAIRLRSKVNAAARAVLAHHEFVEVETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            QDD++   E VL  +++    G+ +     R+ Y +A+RRYG+DKPDLR  + +    E
Sbjct: 239 NQDDVILLAEEVLSSLWKLV--GHEIKTPIARMTYAEAMRRYGSDKPDLRFGVELVECAE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  + FRVF +         V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 297 FFKDTTFRVFQQEY-------VGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPVAK+L     E +   +  + GD  FF AG      +    AR  IA++
Sbjct: 348 GEDGTLG--GPVAKNLTDTEREGLAAHVGAKPGDCIFFAAGTTKSSRALLGAARGEIARK 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473
             +I+ + + F W++D P +E   +     D A         H+ FT P+         D
Sbjct: 406 QNLIDPDAWAFVWVVDAPLFEPTADATASGDVALGYSAWTAVHHAFTSPKPESIDTFDTD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  A+ YD+VCNG EI  G IR H  ++  + F  +GIS E  E +FG L  AF  G 
Sbjct: 466 PGSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFKVMGISHEEAEEKFGFLLDAFAFGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G DRI  LL G  ++REV  FP S    D L  +P+ ++ +Q +E G+    
Sbjct: 526 PPHGGIAFGWDRITALLAGVDSIREVIAFPKSGGGVDPLTNAPAPITAQQRKESGVDAKP 585

Query: 594 NPK 596
            PK
Sbjct: 586 EPK 588


>gi|254518566|ref|ZP_05130622.1| aspartyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226912315|gb|EEH97516.1| aspartyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 594

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 241/592 (40%), Positives = 356/592 (60%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG++  ++V   + L GWV R R  GG+ F+D+RD  GI Q+V     ++  FE A
Sbjct: 10  RTLMCGEVRENNVSQKITLMGWVQRNRKLGGLQFIDLRDRTGIMQIVFGEAINAEAFEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K VR E+ + + G V+ R A   N N+ TG +EL  + ++ILS ++  P+ +    +  E
Sbjct: 70  KDVRPEYCIAVTGEVVLREAP--NHNMPTGLVELKCESLKILSESDTPPIYIKEGLDAAE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           SIR KYR+LDLRR  + +  + R RI  S+R  +   NF+E  TP+LT S+PEGARD+LV
Sbjct: 128 SIRLKYRYLDLRRPDMQRIFMIRNRISKSVRDYLDDNNFLEVETPMLTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R++R P EF Q+D+EMS
Sbjct: 188 PSRNYPGMFYALPQSPQIFKQLLMVSGFDRYYQIVKCFRDEDLRANRQP-EFTQIDLEMS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQ+D++   E ++  VF+E + G  V     R+ + DA+ +YG+DKPDLR  + + N+
Sbjct: 247 FVEQEDVIKMNEGLIAHVFKEVA-GVDVKLPIKRMTFKDAMEKYGSDKPDLRFGMEITNI 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE     +F VF    ++  G  V A+  KGG    R   D++ E+ ++    GLA+I  
Sbjct: 306 TEDVKDMDFVVFKS--AIEAGGSVRALCLKGGADLGRKPIDKLGEFVKTYKAKGLAWI-- 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           +L E G  +    +AK L    T +I   +  + GD+ F +A  + + F S  A  R  +
Sbjct: 362 QLKEDGVKSS---IAKFLTDDVTNSIVKTMGAEVGDAIFIVADKNSVVFQSLGA-LRLEL 417

Query: 421 AQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           A++  +I + N F F WI +FP +E++EEE +   AH+PFT P      +   +   +++
Sbjct: 418 AKQFDLIKDKNEFNFTWITEFPLFEYDEEEGRYHAAHHPFTSPMDEDIDMLETNPGEVRS 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG E+  G IR H S++  + F  +G ++E  + RFG L  AF+ G PPHGG+
Sbjct: 478 KAYDLVLNGEELGGGSIRIHDSKLQQKMFKALGFTEESAQERFGFLIDAFKFGPPPHGGL 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VM L G +N+++V  FP +QN    L  +P+    +QL+ELG+ I
Sbjct: 538 AFGLDRMVMFLAGTENIKDVIAFPKNQNAYCYLSEAPNIADEKQLQELGISI 589


>gi|269977312|ref|ZP_06184285.1| aspartyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|269934615|gb|EEZ91176.1| aspartyl-tRNA synthetase [Mobiluncus mulieris 28-1]
          Length = 595

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/599 (38%), Positives = 341/599 (56%), Gaps = 32/599 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH CG+L + +    V L+GWV R R HGG+ F+D+RD  GI Q+V + D     + + 
Sbjct: 3   RTHKCGELTLKNDMETVTLTGWVDRRRDHGGVAFMDLRDASGIVQLVVSED-----VVRE 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--- 121
           VR+E+VL + G V  R     N  I TG+IE+ A+ +E+L+    LP  V    E     
Sbjct: 58  VRNEYVLKVTGKVRKRPDGNDNPEISTGEIEVVAEDVEVLNPCAPLPFQVSEHAEEAGKV 117

Query: 122 -ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YRF+DLRR  LH N+V R +I +  R  M    F+E  TP LT S+PEGARDF
Sbjct: 118 GEDVRLRYRFVDLRRRQLHDNLVLRAKISSVARRVMEKHEFLEIETPTLTRSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R+  GS+YALPQ+PQ +KQLLM  G +RY+Q+A C+RDED R+DR P EF QLD+E
Sbjct: 178 VVPARIKPGSWYALPQSPQLFKQLLMVGGMERYYQLARCYRDEDSRADRQP-EFTQLDLE 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++   E++L+ V+     G  +     R+ + +A+ +YG+DKPDLR    + 
Sbjct: 237 MSFVDQDDVMAVTEDLLKEVWAVI--GYDLKTPIPRMPFKEAMDKYGSDKPDLRFGYELV 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +TE+F  + F++F       P      +P       R F D+  EWA+++G  GLAY+ 
Sbjct: 295 ELTEYFSDTPFKIFQA-----PYVGAVVMPGGAAQPRRTF-DKWQEWAKARGAKGLAYV- 347

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G  A  GPVAK+++    E +      + GD  FF AG+          AR  I
Sbjct: 348 -TIAEDGTTA--GPVAKNISDTEREGLAEVTGAKPGDCIFFAAGERTASQELLGAARLEI 404

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWN-EEEKKIDFA---------HNPFTMPQGGMESLK 470
            +  G+I+   + F W++D P ++ + + E + D A         H+ FT P+       
Sbjct: 405 GKRCGLIDPKAWAFTWVVDAPLFKPSGQAEAEGDVALGHSAWTAVHHAFTSPKPECMDTF 464

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  S  A+ YD+VCNG E+  G IR H  +V  + F  +G S E  + RFG L  AF+
Sbjct: 465 DTDPGSALAYAYDIVCNGVELGGGSIRVHRRDVQERIFKVMGFSPEEAQARFGFLLDAFK 524

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            G PPHGG+A G DRI  +L  + ++R+V  FP + +  D L G+P+ ++ EQ +E G+
Sbjct: 525 YGAPPHGGLALGWDRIAGMLTASPSIRDVIAFPKAGDGFDPLTGAPAPITDEQRKETGV 583


>gi|255656726|ref|ZP_05402135.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296452447|ref|ZP_06894148.1| aspartate--tRNA ligase [Clostridium difficile NAP08]
 gi|296877796|ref|ZP_06901822.1| aspartate--tRNA ligase [Clostridium difficile NAP07]
 gi|296258777|gb|EFH05671.1| aspartate--tRNA ligase [Clostridium difficile NAP08]
 gi|296431247|gb|EFH17068.1| aspartate--tRNA ligase [Clostridium difficile NAP07]
          Length = 595

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/592 (37%), Positives = 345/592 (58%), Gaps = 16/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RTH CG+L   ++   V L GWV + R  GG++F+D+RD  G+ Q+V   + D   FE A
Sbjct: 9   RTHYCGELREKNINEEVVLMGWVQKKRNLGGLVFVDLRDTSGLCQIVFDTDVDKESFEKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +E+V+ + G V  R ++  N N+ TG IE+ A ++ +L+ +E  P+ +  + +  E
Sbjct: 69  EKLGAEFVIAVKGKVCERQSK--NPNMPTGDIEIFATELRLLNKSETPPIYIKDDDDVSE 126

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLR+ ++ +N+  R +++N  R  +    F E  TP L A +PEGARD+LV
Sbjct: 127 ALRLKYRYLDLRKPSMQRNLKLRHKVMNITRNYLSNNRFCEIETPFLIAPTPEGARDYLV 186

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ YKQLLM SG DRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 187 PSRVNPGKFYALPQSPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 245

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQ+D+++ +E +L  +F+E  +   ++    ++ Y +A+ RYG+DKPD R    + ++
Sbjct: 246 FVEQEDVMSMIEGLLEVIFKEVLDVE-LTLPLPKMTYAEAMSRYGSDKPDTRFGYELTDI 304

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           ++   +  F+VF+   +  PG  V  I  KG   +  R     + E A++    GLA++ 
Sbjct: 305 SDVVCNCGFKVFAD--ATQPGKSVRGINVKGKADDFTRKQISSLEEHAKTYRAKGLAWM- 361

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               + G      P+AK  +     AI  R++ + GD   F+A             R  +
Sbjct: 362 ----KVGQEGVTSPIAKFFSEEEMNAILTRMNAEVGDLLLFVADKNSIVFDALGQVRLEV 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
           A  L +++ N +   W+ +FP +E +EE       H+PFT P    ++ L+  D  S++A
Sbjct: 418 ANRLNLLDKNVYNLLWVTEFPVFEEDEETGTFSAMHHPFTSPMDEDLDKLEEGDKASLRA 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R   S+V  + F  +G ++E    +FG L  AF+ G PPH G+
Sbjct: 478 KAYDIVLNGYEIGGGSVRISNSDVQSRMFKALGFTEERANEKFGYLLEAFKYGTPPHAGL 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL GA N+REV  FP +QN    +  +P+    EQL EL +++
Sbjct: 538 AFGLDRLVMLLAGADNIREVIAFPKNQNAVCPMTNAPTLAENEQLEELSIKV 589


>gi|226941365|ref|YP_002796439.1| aspartyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|254781737|sp|C1DB91|SYD_LARHH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226716292|gb|ACO75430.1| Syd [Laribacter hongkongensis HLHK9]
          Length = 603

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 240/597 (40%), Positives = 345/597 (57%), Gaps = 16/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +   V + GWVHR R HGG+IF+D+RD  G+ QVV +PD+   F  A 
Sbjct: 2   RTDYCGLIDTRYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGLVQVVIDPDTPEAFATAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V  R   T NA +I+G+IEL A++IEIL+ A   P  +  E    E+
Sbjct: 62  SARNEFVLSITGRVRRRPEGTTNAKMISGEIELLAKEIEILNAAATPPFQIDDE-NLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + KN+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPAMQKNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQIVKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +DDI++  E + R VF +  +      +F R+ Y DA+  YG+DKPDLR  +    +T
Sbjct: 240 LNEDDIMDITEGMARQVFHDAMDVEL--GDFPRMTYADAMHYYGSDKPDLRVSLKFAELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI--- 359
           +      F+VF+   ++ P   V A+   GG   +R   D   ++    G  GLAYI   
Sbjct: 298 DVMKDVPFKVFNAAANL-PNGRVVALRVPGGAKLSRKEIDEYTQFVGIYGAKGLAYIKVN 356

Query: 360 -FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR- 417
              +L          P+ K+L     ++I  R   ++GD  FF A D  K  + A  A  
Sbjct: 357 DVSKLTTDETSGLQSPIVKNLTEGVLKSIVERTGAENGDIIFFGA-DKAKVVNEAIGALR 415

Query: 418 ---NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
               H   E G      +   W++DFP +E++E++ +    H+PFT P+ G E L   D 
Sbjct: 416 IRIGHEHGEAGGYFVREWRPLWVVDFPMFEYDEDDDRWTACHHPFTSPKPGHEDLMATDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F  + IS E  +N+FG L    + G P
Sbjct: 476 GACIARAYDMVLNGWEIGGGSIRIHRADVQEKVFGALKISPEEQQNKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PHGG+A G+DR+V L+ GA ++R+V  FP +Q    LL  +P+ V  +QL+EL LR+
Sbjct: 536 PHGGLAFGLDRLVTLMAGADSIRDVIAFPKTQRAQCLLTNAPNAVDEKQLKELSLRL 592


>gi|254779393|ref|YP_003057498.1| aspartyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001304|emb|CAX29285.1| Aspartate-tRNA ligase (Aspartic acid translase) (Aspartyl-tRNA
           synthetase) [Helicobacter pylori B38]
          Length = 577

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 225/589 (38%), Positives = 344/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKIIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G V  R A   N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGRVRLRGAGLENPKLKTGKIEIVLEELVIENKSTTPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++DD+++ +E++L+ +F+    G+T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DEDDVMSVVEDLLQEIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+    G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAKDPKNKRIKALNVKGADAIFSRSVLKELEEFVCQFGAKGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS +S EQLREL +R+
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTNAPSPISEEQLRELHIRL 575


>gi|227499572|ref|ZP_03929679.1| aspartate--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227218331|gb|EEI83585.1| aspartate--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 582

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/595 (38%), Positives = 355/595 (59%), Gaps = 18/595 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACF 59
           M   RT+ CGDL V +VG  V L GWV + R  G ++F+D+RD  GITQ VV + D   +
Sbjct: 1   MEFKRTNMCGDLRVENVGDSVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVVRDEDKDNY 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A+S+  E+VL + G V  R  E+ N +I TG+IE+ A KI IL  A+  P+ +  + +
Sbjct: 61  EKARSLAQEYVLEVKGTVHER--ESKNPDIATGEIEIIADKINILDRAKTPPIYIKDDDD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E++R KYR+LDLR+ ++ +N+  R+ I+ ++R  M    F E  TP LT  +PEGARD
Sbjct: 119 VSENLRLKYRYLDLRKASVQRNLKLRSDIVRTIREYMYNNEFTEVETPFLTKPTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+N+G FYALPQ+PQ  KQ+LM    DRYFQ+  CFRDED R++R P EF QLDM
Sbjct: 179 YLVPSRINEGKFYALPQSPQLLKQILMIGSLDRYFQVVKCFRDEDLRANRQP-EFTQLDM 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF +QDD++   E +L+ +F+++++ + +     R+ Y +AI  YG+DKPDLR    +
Sbjct: 238 EMSFSDQDDVIAMNEGLLKELFDKYTDYD-LKLPIDRMDYSEAINSYGSDKPDLRYGYKI 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLA 357
            +V+E F  S+F+VF+   + + G  V AI  K    N  R   D++ ++ +  G  GL+
Sbjct: 297 QDVSEIFKDSDFKVFAD--NTSDGKSVRAINFKAIADNYSRKQLDKLTDFVKDYGLKGLS 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           YI +    S  V     + K L       ++ +L ++DGD    +A D  K    A  A 
Sbjct: 355 YIKY----SDEV--QSSIKKFLTDEVLANLKEKLAIEDGD-LILLAADKNKVVLDAMGAL 407

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +A++  +I    F  CW+++FP +E++EEE +    H+PFTMP      L   +   
Sbjct: 408 RRKVAKDNNLIEKE-FALCWVVNFPMFEYSEEEDRYVAQHHPFTMPNEEDIDLLLTEPEK 466

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++   YD+V NG E+  G +R + S++  + F  + +S+E ++N+FG    A Q G PPH
Sbjct: 467 VRTQAYDIVINGDEMGGGSVRINNSDLQEKVFEALKLSEEDIKNKFGFFIEALQYGTPPH 526

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR+VML    +N++++  FP +Q+    L  +PS V  + L+EL +++
Sbjct: 527 AGLAYGLDRLVMLFAKTENIKDIIAFPKTQSATCPLTEAPSIVDEKALKELNIKL 581


>gi|183601795|ref|ZP_02963165.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219683675|ref|YP_002470058.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241190707|ref|YP_002968101.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196113|ref|YP_002969668.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|61679298|gb|AAX52927.1| AspRS [Bifidobacterium animalis subsp. animalis ATCC 25527]
 gi|183219401|gb|EDT90042.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219621325|gb|ACL29482.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240249099|gb|ACS46039.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250667|gb|ACS47606.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|295793696|gb|ADG33231.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 600

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/603 (38%), Positives = 349/603 (57%), Gaps = 35/603 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   D+    VG  V L+GWV R R HGG+ F+D+RD+ G+ QVV N +    E+A+
Sbjct: 7   YRTHHATDVTEVLVGEHVTLAGWVDRRRDHGGVAFIDLRDNTGLVQVVINEE----EMAR 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117
            +RSE+V+ +DG V  R     N ++ TG++E+ A+KI +L+ ++ LP  V        E
Sbjct: 63  PLRSEYVIEVDGKVRQRPEGNENDHLATGKVEVVAEKIRVLAKSDALPFQVSTALENESE 122

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR  + +NI  R+ ++ + R  +    F E  TP +  S+PEG
Sbjct: 123 NKLPGEDVRLKYRYLDLRRPAMQRNIKLRSDMMRAARTELDKLGFTEVETPTMIKSTPEG 182

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM +G +RY+Q A C+RDED R+DR P EF Q
Sbjct: 183 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVAGVERYYQFARCYRDEDFRADRQP-EFTQ 241

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEMSFV+Q+D++   E V++ +++  ++G  +     RI + +A+ +YG+DKPDLR  
Sbjct: 242 LDMEMSFVDQEDVIAMAEQVIKAIWK--ADGYDIETPIRRIPWQEAMDKYGSDKPDLRFG 299

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPG 355
             +  +T++F ++ FRVF           V A+  KGG    R   D   +WA+ +G  G
Sbjct: 300 NELIELTDYFKNTPFRVFQAPY-------VGAVLFKGGASTPRRQFDAWQDWAKQRGAKG 352

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAY+     E+G +   GPVAK+L+      ++  +  +DGD+ FF AG           
Sbjct: 353 LAYVV--FGENGELK--GPVAKNLSGEERNGLKEAVGAEDGDAVFFAAGARESSQLLLGA 408

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQGGM 466
            R  +A   G+++   F FCW++DFP ++  ++    D A         H+PFTMP    
Sbjct: 409 VRVELANRAGLLDPKKFAFCWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSKDW 468

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
                 D     +  YD+VCNG E+  G +R H  ++  +  + +GI+ +  +++FG L 
Sbjct: 469 IDTFDEDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVLGITPQEAQDKFGFLL 528

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            AF+ G PPH GIA G DR V LL GA ++R+V  FP +    D L G+P+ +S EQ  E
Sbjct: 529 EAFKYGAPPHAGIALGWDRTVALLAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAE 588

Query: 587 LGL 589
            G+
Sbjct: 589 TGV 591


>gi|167772469|ref|ZP_02444522.1| hypothetical protein ANACOL_03847 [Anaerotruncus colihominis DSM
           17241]
 gi|167665572|gb|EDS09702.1| hypothetical protein ANACOL_03847 [Anaerotruncus colihominis DSM
           17241]
          Length = 592

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/596 (39%), Positives = 341/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT  CG    +D G    + GWV RVR  G ++F+D+RD  G+ Q+  +  +A    AK 
Sbjct: 9   RTDYCGTFTAADDGRQAVVCGWVQRVRDKGMLVFIDLRDRTGVMQLAFDDKTAADLRAKA 68

Query: 64  -SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +VR+E+VL   G V  R  E++N +I TG++EL    + IL+ A+  P  +  +    E
Sbjct: 69  QTVRAEFVLMAKGTVRRR--ESVNRDIPTGEVELYVDDLRILARAQTPPFEITDQTNVKE 126

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLRR  +   ++ R +I+ +         FIE  TP L  S+PEGARD+LV
Sbjct: 127 ELRLRYRYLDLRRSEMQHALLMRHKIVKAAHDYYDENGFIEIETPALIKSTPEGARDYLV 186

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G+FYALPQ+PQQYKQ+LM SGFDRY QIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 187 PSRVHPGAFYALPQSPQQYKQMLMLSGFDRYMQIARCFRDEDLRADRQP-EFTQIDLEMS 245

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++DD++   E  ++ VF E   G  +   FLR+ YD+A+RR+G+DKPD+R  + + ++
Sbjct: 246 FVDEDDVMTVNEGFMKRVFHEVL-GVEIETPFLRMPYDEAMRRFGSDKPDVRFGMELTDL 304

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           ++      F+VF   L  + G  V AI AKG   +  R   D++ ++ R+    GLA  F
Sbjct: 305 SDLLSDCAFKVFRGAL--DAGGSVRAINAKGAADHLSRKEIDKLADFVRTYRAGGLA--F 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG--DPLKFCSFAADARN 418
            RL      +      K L     +AIR R+  + GD    +A   +   F S  A  R 
Sbjct: 361 TRLTHDAESSS---YEKFLTDTEKDAIRARMGAEKGDVILIVADGKNQTVFDSLGA-LRV 416

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +   LG+I    F+F W+  FP +E++EEE +    H+PFT P         +D    +
Sbjct: 417 ELGSRLGLIKPGVFKFLWVTQFPLFEYSEEEDRYVAKHHPFTHPAFEDIDRVESDPGVCR 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G IR +  E+  + F  +G S E    RFG L  AF+ G PPHGG
Sbjct: 477 ARAYDMVLNGCEVGGGSIRINTPELQERMFRALGFSTEEARARFGYLIDAFKFGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR+VML+L   ++R+V  FP  QN  +L+   P+ V  + LREL L +V+ 
Sbjct: 537 MAYGLDRLVMLMLEKDSIRDVIAFPKVQNASELMTQCPAEVDEKALRELSLAVVKE 592


>gi|302206283|gb|ADL10625.1| Aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|308276525|gb|ADO26424.1| Aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 600

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 247/613 (40%), Positives = 345/613 (56%), Gaps = 34/613 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +H  RTH  GDL     G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +    E
Sbjct: 2   VHVLRTHLAGDLRKDTAGQTVTLTGWVSRRRDHGGVIFIDLRDSSGLVQVVFRENDVA-E 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-- 118
            A  +RSE+ + + G+V +R   + N N+ +G+IE++   +EIL+ A  LP  +      
Sbjct: 61  KAHHLRSEFCIKVTGVVEARPEGSENPNLASGEIEINVNDLEILNEAAALPFQIDDASQS 120

Query: 119 --EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             E  E  R KYR+LDLRR T    +  R++   + R  +   +F+E  TP LT S+PEG
Sbjct: 121 GGEVGEEARLKYRYLDLRRPTQGGALRLRSKANQAARRVLDTHDFVEIETPTLTRSTPEG 180

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDFLVP+R+  GS+YALPQ+PQ +KQLLM +G + Y+QIA C+RDED R+DR P EF Q
Sbjct: 181 ARDFLVPARLKPGSWYALPQSPQLFKQLLMVAGMEHYYQIARCYRDEDFRADRQP-EFTQ 239

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+EMSFV+QDD++   E ++  +++    G  +     R+ Y DA+R YG+DKPDLR  
Sbjct: 240 LDIEMSFVDQDDVIALAEEIVSELWKLI--GYNIPTPIPRMTYADAMRLYGSDKPDLRFD 297

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPG 355
           I +   T++F  + FRVF           V A+  +GG    R   D   EWA+ +G  G
Sbjct: 298 IKIVECTDYFKDTTFRVFQNEY-------VGAVVMEGGASQPRRQLDAWQEWAKQRGAKG 350

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI   + E G ++  GPVAK++       I   +  Q GD  FF AGD     +    
Sbjct: 351 LAYIL--VGEDGELS--GPVAKNITESERAGIAAHVGAQPGDCIFFAAGDTKSSRALLGA 406

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGG 465
           AR  IA++LG+I    + F W++D P +E + +            K    H+ FT P+  
Sbjct: 407 ARGEIARKLGLIKDGDWAFTWVVDAPLFESSADATASGDVALGHSKWTAVHHAFTSPKPE 466

Query: 466 -MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
            +ES   N   +  A+ YD+VCNG EI  G IR H  +V  + F  +GI++E    +FG 
Sbjct: 467 WLESFDENPGEAT-AYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAREKFGF 525

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF  G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ + +EQ 
Sbjct: 526 LLDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPIPLEQR 585

Query: 585 RELGLRIVENPKK 597
           RE G+     PKK
Sbjct: 586 RETGVDF--KPKK 596


>gi|187250796|ref|YP_001875278.1| aspartyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|238064708|sp|B2KBB9|SYD_ELUMP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|186970956|gb|ACC97941.1| Aspartyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 583

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 240/590 (40%), Positives = 338/590 (57%), Gaps = 13/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT+ CGD+  + V S   L GWV+  R HGG++FLD+RD  G  QVV  P +  FE+A +
Sbjct: 3   RTNYCGDINKNYVNSVQVLCGWVNSYRDHGGVLFLDLRDRTGKVQVVVEPTNKDFELAST 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
            R+E+VL + GLV  R  E IN N  TG+IE+ AQ++EIL+ + +LP      R+  E  
Sbjct: 63  ARTEYVLKVTGLVRLRQTEHINPNNPTGEIEVVAQEVEILNTSIQLPFEPDNSRQINEET 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR++DLR   +  N+  R ++  + R       FIE  TPILT S+PEGARD+LVPS
Sbjct: 123 RLKYRYIDLRNPVMLHNLTTRHKVAQAARRYFSDNGFIEIETPILTRSTPEGARDYLVPS 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G FYALPQ+PQ +KQ LMASG DRYFQIA  FRDED RSDR P E  Q+D+EMSFV
Sbjct: 183 RVHEGKFYALPQSPQMFKQTLMASGVDRYFQIARAFRDEDLRSDRQP-EHTQIDIEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              D+    E ++  VF+  +  +  +  F ++ Y D + +YG+DKPD+R  I + ++  
Sbjct: 242 TLADVFAAGEGMIAEVFKA-AGEDAPAAPFEQMEYADVMAKYGSDKPDIRYEIDITDIGG 300

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F +S F+V S  L+   G  V AI AK G    NR+ CD++ + A++ G  GL ++ + 
Sbjct: 301 IFTNSNFKVVSDALA--NGGVVRAIKAKYGAKHINRSTCDKLTDLAKASGAKGLVWLKYS 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
            D+       GP AK        +++  L ++  D   FI  D  K  S    A R  + 
Sbjct: 359 DDKFE-----GPSAKFFTEEELASLQHTLSVEK-DDMVFIGADKEKVVSPVMGAIRKELI 412

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L +     + F W+  FP  E+  EE + D AHNPFT P      L   D   +K++Q
Sbjct: 413 KLLCLKPNKKWAFLWVKHFPLLEFVPEENRWDAAHNPFTAPLEKDIPLLDTDPGKVKSYQ 472

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DLV NG E+ASG IRNH  ++  +  + +  S E    RFG L  A + G PPHGG   
Sbjct: 473 FDLVLNGVELASGSIRNHRRDLQEKILNLMKHSPEQAALRFGMLLNALEAGAPPHGGFGM 532

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+  LL   +++REV  FP +      L  SP+ V   QL+EL ++I
Sbjct: 533 GLDRLAALLCKEESIREVIAFPKTATAYCPLTESPNVVEDIQLKELHIKI 582


>gi|157364498|ref|YP_001471265.1| aspartyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166979994|sp|A8F7R7|SYD_THELT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157315102|gb|ABV34201.1| aspartyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 585

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/588 (38%), Positives = 344/588 (58%), Gaps = 16/588 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L + DVG  V L+GW+ R+R  GG+ FL +RD YG TQ++ + +        +
Sbjct: 3   RTHTCGELTIKDVGKKVILAGWIDRIRDLGGVKFLMLRDRYGQTQIILSQNCQI-----N 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-GEREYP-E 122
           +R E V+ I+G+V  R  ETIN +++TG+IE+ A+K+ + S  E+  LP + GE + P E
Sbjct: 58  LRRESVVQIEGVVQKRPEETINKDLLTGEIEVFAEKVNVFSSPEK-DLPFYPGETKLPAE 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR++DLRR  +   I+ R ++   +R  +    FIE  TP LT S+PEGARDFLV
Sbjct: 117 EIRLKYRYIDLRRKEVSDRIITRHKVTQCIRNYLSKNGFIEVETPFLTKSTPEGARDFLV 176

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G+FYALPQ+PQ +KQLLM  G DRYFQ+  CFRDED R+DR P EF Q+D+EMS
Sbjct: 177 PSRLKPGTFYALPQSPQLFKQLLMIGGIDRYFQVVRCFRDEDLRADRQP-EFTQIDIEMS 235

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   DD+L   E +++ +F+E    + +     R+ Y++ + +YG+DKPD R  +   ++
Sbjct: 236 FNTMDDVLEITEGMIKHLFKEVLQVD-LPGKLDRLTYNECMNKYGSDKPDRRIGMEFFDL 294

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++HF   E+   +  LS     + + +       +R   D +NE A+S G  G+ +  + 
Sbjct: 295 SKHFKTCEYHAINAELSSGGVVKGFVVRDFANKMSRKLADELNEIAKSLGGGGILWFSFD 354

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             ES   AG   + K+ N V  E     L +   D C   AG      +   + R  + +
Sbjct: 355 SPESIKGAGAKYLQKNYNSVAKE-----LSINYNDVCVLSAGKIDIVNTVLGEVRKILGE 409

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
                    F+  W+ DFP +E++EEE +    H+PFTMP    ++  K +DL  I+A  
Sbjct: 410 RYFSDLRKGFDIFWVTDFPMFEYSEEENRFVAQHHPFTMPNLDDLKKYKNSDLSKIRAQS 469

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NGFE+ SG IR H +E+  + F  + +++E V+ +FG L  AFQ G PPHGGIA 
Sbjct: 470 YDIVINGFEVGSGSIRIHDAELQREIFKLMRLTEEEVKLKFGFLLEAFQYGAPPHGGIAL 529

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           G+DR+  ++ G   +REV  FP + +    L G+P  V+ +QL EL +
Sbjct: 530 GLDRLTAIICGVPTIREVIAFPKTSSGICPLTGAPDVVNQKQLDELKI 577


>gi|325134831|gb|EGC57467.1| aspartyl-tRNA synthetase [Neisseria meningitidis M13399]
          Length = 602

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 238/598 (39%), Positives = 356/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR T+ +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPTMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|326382140|ref|ZP_08203832.1| aspartyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198870|gb|EGD56052.1| aspartyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 605

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 239/597 (40%), Positives = 345/597 (57%), Gaps = 30/597 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L   D    V + GWV R R HGG++F+D+RD  G+ QVV   D    E A  
Sbjct: 3   RTHFAGSLRREDASQTVTVVGWVARRRDHGGVVFIDLRDSSGLVQVVFR-DEQVAEAAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V +R   + NA + +G+IE++A+++ +L+  E  PLP   + +  E  
Sbjct: 62  LRAEYCVQVTGQVEARPEGSENAALASGEIEINARELVVLN--ESAPLPFQLDEQPGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR+   K I  R+++  + R  + + +F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLRHRYLDLRREGPAKAIRLRSQVSAAARSVLGSHDFVEIETPTLTKSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++DD++   E +L  +++    G  ++    R+ Y DA+RR+G+DKPDLR  I +   TE
Sbjct: 239 DEDDVIALAEEILVALWKLI--GVELTTPIPRMTYADAMRRFGSDKPDLRFDIELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  S FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 297 FFADSPFRVFQAPY-------VGAVVMPGGASQPRRQLDAWQEWAKQRGARGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPVAK+++    + I   +  Q GD  FF AG      +    AR  IA +
Sbjct: 348 QEDGTL--TGPVAKNISDAERDGIAAHVGAQPGDCIFFAAGPVKAMRALLGAARGEIANK 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQG-GMESLKGN 472
           LG+I    + F W++D P +E  ++     D A         H+ FT P+   ++ L+ N
Sbjct: 406 LGLIKEGDWAFTWVVDAPLFEPADDATAAGDVAVGSGAWTAVHHAFTSPKPESLDKLESN 465

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
              ++ A+ YD+VCNG EI  G IR H  +V  + F  +GI +E  + +FG L  AF  G
Sbjct: 466 PGEAL-AYAYDIVCNGNEIGGGSIRIHRRDVQERVFKIMGIGEEDAQEKFGFLLDAFSYG 524

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            PPHGGIA G DRI  LL G  ++REV  FP S    D L  +P+ ++ EQ +E G+
Sbjct: 525 APPHGGIAFGWDRITALLAGEPSIREVIAFPKSGGGIDPLTDAPAPITAEQRKETGI 581


>gi|311109472|ref|YP_003982325.1| aspartyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310764161|gb|ADP19610.1| aspartyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 595

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/594 (39%), Positives = 346/594 (58%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT   G +    +G  V L GWV+R R HGG+IF+D+RD  G+ Q+V +PD+A F  A+ 
Sbjct: 2   RTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRAGLAQIVFDPDNAAFATAER 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + GLV  R A T NA + +G+IE+  +++EIL+ +   P  +  +    E+ 
Sbjct: 62  LRNEFCVRVTGLVRERPAGTANAELASGEIEVLCKEVEILNASVTPPFQL-DDDNLSETT 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  +R LDLRR  + +N++ R R+    R  +    FI+  TP+L  S+PEGARD+LVPS
Sbjct: 121 RLTHRVLDLRRPQMQRNLMLRYRVSIETRKFLDQLGFIDIETPMLAKSTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF+
Sbjct: 181 RVNAGHFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSFL 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            + +I    EN++R VF+    G  +++ F  + + +A+RRYG+DKPDLR  +   ++T+
Sbjct: 240 NEFEIREIFENLIRHVFK-VVQGVDLASPFPIMPWTEAMRRYGSDKPDLRVKLEFTDMTD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363
                +F+VF+   +  PG  V A+   GG   +R+  D   ++    G  GLAYI    
Sbjct: 299 VMRDVDFKVFAAAATA-PGSRVVALRVPGGAEMSRSEIDGYTQFVGIYGAKGLAYIKVNE 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+      +  R   QDGD  FF A D  K  + A  A       
Sbjct: 358 VAKGREGLQSPIVKNLHDAALAELVKRTGAQDGDIIFFGA-DREKVVNDAIGALRVKIGH 416

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   ++ G+     ++  W++DFP +E++EE+ +   AH+PFT P+ G E     D    
Sbjct: 417 SEFGKKTGLFEAG-WQPLWVVDFPMFEYDEEDGRYTAAHHPFTSPKDGHEDFLETDPSKA 475

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E    +FG L  A Q G PPHG
Sbjct: 476 FAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAREKFGYLLDALQYGAPPHG 535

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DRIV ++ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+
Sbjct: 536 GIAFGLDRIVTMMTGAESIRDVIAFPKTQRAQDLLTQAPSEVDEKQLRELHIRL 589


>gi|241889468|ref|ZP_04776768.1| aspartyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863864|gb|EER68246.1| aspartyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 590

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 234/595 (39%), Positives = 360/595 (60%), Gaps = 19/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RT   G +    VG  V L GWV + R  G +IF+D+RD  G+ Q V     ++   E+A
Sbjct: 6   RTEYAGRIDEKYVGKKVTLKGWVSKRRDLGNLIFIDVRDRMGVVQCVFSGEKNAELHELA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++R+E+V+ I+G V+ R+  T+N  I +G++E+ A K+EILS A+ LP  +       E
Sbjct: 66  GTLRNEFVVSIEGEVVLRNESTVNEKIASGKVEVIADKLEILSKAKTLPFVLDDASLSSE 125

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  L + +  R++I  + R  +    F++  TPILT S+PEGARD+LV
Sbjct: 126 ELRLKYRYLDLRRTELAEVLHLRSKITKATRDYLDNNMFVDVETPILTKSTPEGARDYLV 185

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+Q+A CFRDED R+DR P +F Q+DMEMS
Sbjct: 186 PSRVHPGEFYALPQSPQLFKQLLMIAGFDRYYQVARCFRDEDLRADRQP-DFTQIDMEMS 244

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++IL  +E ++  V +E   G  V   F R+ Y++A+ R+G+DKPD R  + + +V
Sbjct: 245 FMSQEEILTMIEGLIAHVMKEV-KGIDVVLPFPRLDYEEAMERFGSDKPDTRFGMELKDV 303

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++   + +F+VFS   +V  G  V  I AKG     +R   D + ++  + G  GLA++ 
Sbjct: 304 SDLVKNLDFKVFSN--AVEQGGAVKCIVAKGCAEQYSRKDIDALGKYVANYGAKGLAWV- 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
            ++ E G     G +AK       + +  R+D + GD   F A D  K C  +  A R  
Sbjct: 361 -KVTEEGL---NGAIAKFFTDEVAQELVARVDAEVGDIILF-AADSKKVCYASLGALRQK 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A +L +I+ + + + W++++P  E++EE+ +   AH+PFTMP+  +E ++  +    KA
Sbjct: 416 LAADLDLIDKDKYNYLWVVNWPLLEYDEEKGRYSAAHHPFTMPK--VEDVELLEAAPEKA 473

Query: 480 F--QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +   YD+V NG+E+  G IR +  EV    F  +G ++E  + +FG L  AF+ G+PPHG
Sbjct: 474 YAQAYDIVLNGYELGGGSIRIYDKEVQSSMFKALGFTQEQAQEQFGFLLDAFEYGVPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G A G+DR VMLL G  N+R+   FP + N  D +  +PS V +EQL EL + ++
Sbjct: 534 GCALGLDRFVMLLAGRDNLRDTIAFPKTANAADPMTQAPSPVDLEQLLELNISLL 588


>gi|289178445|gb|ADC85691.1| Aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 643

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/603 (38%), Positives = 349/603 (57%), Gaps = 35/603 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   D+    VG  V L+GWV R R HGG+ F+D+RD+ G+ QVV N +    E+A+
Sbjct: 50  YRTHHATDVTEVLVGEHVTLAGWVDRRRDHGGVAFIDLRDNTGLVQVVINEE----EMAR 105

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117
            +RSE+V+ +DG V  R     N ++ TG++E+ A+KI +L+ ++ LP  V        E
Sbjct: 106 PLRSEYVIEVDGKVRQRPEGNENDHLATGKVEVVAEKIRVLAKSDALPFQVSTALENESE 165

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR  + +NI  R+ ++ + R  +    F E  TP +  S+PEG
Sbjct: 166 NKLPGEDVRLKYRYLDLRRPAMQRNIKLRSDMMRAARTELDKLGFTEVETPTMIKSTPEG 225

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM +G +RY+Q A C+RDED R+DR P EF Q
Sbjct: 226 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVAGVERYYQFARCYRDEDFRADRQP-EFTQ 284

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEMSFV+Q+D++   E V++ +++  ++G  +     RI + +A+ +YG+DKPDLR  
Sbjct: 285 LDMEMSFVDQEDVIAMAEQVIKAIWK--ADGYDIETPIRRIPWQEAMDKYGSDKPDLRFG 342

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPG 355
             +  +T++F ++ FRVF           V A+  KGG    R   D   +WA+ +G  G
Sbjct: 343 NELIELTDYFKNTPFRVFQAPY-------VGAVLFKGGASTPRRQFDAWQDWAKQRGAKG 395

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAY+     E+G +   GPVAK+L+      ++  +  +DGD+ FF AG           
Sbjct: 396 LAYVV--FGENGELK--GPVAKNLSGEERNGLKEAVGAEDGDAVFFAAGARESSQLLLGA 451

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQGGM 466
            R  +A   G+++   F FCW++DFP ++  ++    D A         H+PFTMP    
Sbjct: 452 VRVELANRAGLLDPKKFAFCWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSKDW 511

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
                 D     +  YD+VCNG E+  G +R H  ++  +  + +GI+ +  +++FG L 
Sbjct: 512 IDTFDEDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVLGITPQEAQDKFGFLL 571

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            AF+ G PPH GIA G DR V LL GA ++R+V  FP +    D L G+P+ +S EQ  E
Sbjct: 572 EAFKYGAPPHAGIALGWDRTVALLAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAE 631

Query: 587 LGL 589
            G+
Sbjct: 632 TGV 634


>gi|254785044|ref|YP_003072472.1| aspartyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|259511871|sp|C5BPP4|SYD_TERTT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|237684225|gb|ACR11489.1| aspartate--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 600

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/595 (38%), Positives = 353/595 (59%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG L  +++G  V L GWV R R HGG+IF+D+RD  GI QVV +PD+   F +A 
Sbjct: 2   RSVYCGVLTAANIGEEVTLCGWVDRRRDHGGVIFVDLRDRDGIVQVVFDPDAEDNFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR E+VL + G V +RS  T+NAN+ TG++E+    + IL+ A+  P  +       E 
Sbjct: 62  KVRPEYVLQVTGKVRARSESTVNANMATGEVEIYGTGLTILNTADTPPFQLDSFTSVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR+LDLRR  +  N+  R+++ N++R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLRYRYLDLRRKEMQHNLRFRSKVTNAIRNYLDEHGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++  F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHESKFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ I++  E ++R +F +  + +    +F R+ Y +A+ +YG+DKPD+R P+ M  + 
Sbjct: 241 MDEEQIMSVTEGMIRKLFNDVLSIDL--GDFPRMPYSEAMEKYGSDKPDMRIPLEMVEIK 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   +GG   R   D   ++    G  GLAYI   
Sbjct: 299 DLMKDVEFKVFSAPAN-DPKSRVTAMRVPQGGEIPRKKIDAYTKFVSIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
             +        P+ K L     +AI  R+  ++GD  FF A D  K  + A  A R  + 
Sbjct: 358 DKDDLENGLQSPIVKFLPAEVCKAILERVGAENGDLIFFGA-DTTKVVTEALGALRCKLG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +  C  +   W++DFP +E   +E  +   H+PFT P    E L+ N   ++ +  
Sbjct: 417 EDLDLYTCE-WAPLWVVDFPMFE-ETDEGGLTALHHPFTAPSCSPEDLQANPATAL-SRA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G +R H  ++    F  +GIS E    +FG L  A + G PPHGG+A 
Sbjct: 474 YDMVLNGTELGGGSVRIHNQDMQQAVFKILGISPEEQREKFGFLLDALKFGAPPHGGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR++ML+ GA ++R+V  FP +Q+   L+  +P  V  +QL+EL +R+   P+
Sbjct: 534 GLDRLIMLMTGADSIRDVIAFPKTQSAACLMTDAPGAVDAKQLQELHIRLRAKPQ 588


>gi|270160207|ref|ZP_06188863.1| aspartyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289165023|ref|YP_003455161.1| Aspartyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269988546|gb|EEZ94801.1| aspartyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288858196|emb|CBJ12064.1| Aspartyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 593

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/594 (39%), Positives = 351/594 (59%), Gaps = 14/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH C ++    +G  V + GWVH  R HGG+IFLDIRD  G+ QVV  P++   F  A+
Sbjct: 2   RTHHCLEVNELSLGKEVIVCGWVHNRRDHGGVIFLDIRDSSGLLQVVYEPENVKAFSDAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-- 121
            +RSE+V+ + G+V  R A  IN  + TG++E+    +EIL+ +   P P F   ++   
Sbjct: 62  KLRSEFVVRVTGVVRQRPAGMINETMATGKVEVVGTLLEILNQS---PTPPFLPDDFQIV 118

Query: 122 -ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R+KYR++DLRR  +   +  R ++ + +R  +  +NF++  TP+LT ++PEGARD+
Sbjct: 119 NEDLRYKYRYIDLRRPAMKHKLTVRHQLNSCIRTYLNEQNFLDIETPMLTKATPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF QLD+E
Sbjct: 179 LVPSRVHPGQFYALPQSPQLFKQLLMISGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F++++ ILN +E +L+ VF++  N + +     R+ Y +A+RR+G+DKPDLRNP+ + 
Sbjct: 238 MAFIDEECILNLIEGLLKTVFKQILNVD-LPEKLKRMSYAEAMRRFGSDKPDLRNPLELV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           +V +    S+F+VFS + + +    V A+   GG   +R   D    +    G  GLAYI
Sbjct: 297 DVADLVKESDFKVFS-VAANDIDSRVVALRLPGGCDLSRKDLDDYGRFVSIYGAKGLAYI 355

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G      P+ K L+     AI  R + + GD  FF A             R  
Sbjct: 356 KVNNLAEGMTGLQSPILKFLSEDAINAILHRTEAKTGDVIFFGADKSHIVNESMGALRIK 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
           +  +  ++  + +E  WI+D+P +E + E KK+   H+PFT P+     +L+ N   ++ 
Sbjct: 416 LGHDKNLLKAS-WELLWIIDWPMFELDYESKKLSPMHHPFTSPKNLDPNNLRTNPTHTL- 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G IR H SE+    F  +GI+++  + +FG L  A Q G PPHGG
Sbjct: 474 AKAYDIVINGYEIGGGSIRIHQSELQKAVFELLGINEQEAQEKFGFLLDALQYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IA GIDR+ MLL  + ++R+V  FP +Q     L  +PS     QL ELG+R+ 
Sbjct: 534 IALGIDRLAMLLTDSTSIRDVIAFPKTQTASCPLTSAPSPTGSAQLTELGIRLA 587


>gi|257871025|ref|ZP_05650678.1| aspartyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257805189|gb|EEV34011.1| aspartyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 590

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 237/593 (39%), Positives = 345/593 (58%), Gaps = 16/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG +  + +   V L GWV + R  GG+IF+D+RD  GI QVV NP+ +   + IA
Sbjct: 4   RTVYCGRVSEAHLDQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEVSKEAWAIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            + RSE+VL + G V++R+ E IN  + TG  E+   +I IL+ A+     +  ++   +
Sbjct: 64  DTCRSEYVLEVTGQVINRAPEAINPKMKTGHYEVMVSEITILNTAKTPAFSIEDDQIVGD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  + KNI+ R +    +R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 ETRLKYRYLDLRRPKMTKNIMMRAKTTQVIRHFLDTNDFLDIETPYLAKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVYPGHFYALPQSPQIFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E +L  V  E   G  V+  F R+ YDDA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQAYTEELLVNVMREV-KGLEVTTPFPRMTYDDAMARYGSDKPDTRFDMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E     +F+VF   +++  G  V A+ AKG     +R   D +  +A   G  GLA++ 
Sbjct: 302 SETVKDVDFKVFQ--MALENGGVVKALNAKGAADKYSRKDMDNLGHYAGQFGAKGLAWV- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
            +++E G     GP+AK L       I    + + GD   F A D  +  S A  A R+ 
Sbjct: 359 -KVEEDGL---KGPIAKFLTDAAASII-AATNAEVGDILMFGA-DKFEIVSAALGAIRSK 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +ELG+I+ + F F W+ D+P +E++ E  +   AH+PFTMP+     L   D   + A
Sbjct: 413 LGKELGLIDESKFNFLWVTDWPQFEYDAEAGRYVSAHHPFTMPKEKDVPLLATDPAKVYA 472

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H  +V  Q F  +G S+  +E +FG L  A   G PPHGGI
Sbjct: 473 EAYDIVLNGYELGGGSLRIHQRDVQEQMFETLGFSRREMEEQFGFLLTALDYGFPPHGGI 532

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VMLL G +N+REV  FP +    D +  +PS V+  QL EL + + 
Sbjct: 533 ALGLDRLVMLLAGEENIREVIAFPKNGKAADPMSQAPSKVAPLQLFELNIDVT 585


>gi|41407161|ref|NP_959997.1| aspartyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|62287578|sp|Q741M7|SYD_MYCPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|41395512|gb|AAS03380.1| AspS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 591

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 241/605 (39%), Positives = 338/605 (55%), Gaps = 30/605 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63
           R+H+ G L  SD G  V L+GWV R R HGG+IF+D+RD  GITQVV  +PD    + A 
Sbjct: 3   RSHAAGSLRSSDAGQQVTLAGWVARRRDHGGVIFIDLRDASGITQVVFRDPD--VLKQAH 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + GLV  R     N  I TG IE++A  + +L   E  PLP   +    E 
Sbjct: 61  RLRAEFCVAVTGLVEIRPEGNANPEIATGDIEVNASSLTVLG--ESAPLPFQLDEPAGEE 118

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRRD     I  R+++  + R  +   +F+E  TP +T S+PEGARDFLVP
Sbjct: 119 LRLKYRYLDLRRDAPASAIRLRSKVNAAAREVLDRHDFVEIETPTITRSTPEGARDFLVP 178

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSF
Sbjct: 179 ARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSF 237

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+ +D++   E +L  ++     G  +     RI Y DA+ RYG+DKPDLR  + +   +
Sbjct: 238 VDAEDVIAISEEILAALWALI--GYDIPRPIPRISYADAMARYGSDKPDLRFGLELVECS 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWR 362
           E F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   
Sbjct: 296 EFFKDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEWAKQRGAKGLAYVL-- 346

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G +   GPVAK+L+      +   +    GD  FF AG      +    AR+ IA 
Sbjct: 347 VGEDGELG--GPVAKNLSEAERAGLAGHVGAAPGDCIFFAAGPAKPSRALLGAARSEIAH 404

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGN 472
            LG+I+   + F W++D P +E  ++     D A         H+ FT P+ G E     
Sbjct: 405 RLGLIDPQAWAFVWVVDPPLFEPADDATAAGDVAVGSGAWTAVHHAFTAPKPGYEDAIET 464

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D  ++ A  YD+VCNG EI  G IR H  ++  + F+ +G+     + +FG L  AF  G
Sbjct: 465 DTGNVLADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDHAEAQEKFGFLLEAFTFG 524

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G DRI  LL    ++REV  FP +    D L  +P+ ++ +Q +E G+ + 
Sbjct: 525 APPHGGIAFGWDRINALLSRVDSIREVIAFPKTGGGVDPLTDAPAPITEQQRKESGIDVK 584

Query: 593 ENPKK 597
             P K
Sbjct: 585 PEPSK 589


>gi|34540016|ref|NP_904495.1| aspartyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|46577172|sp|Q7MXM0|SYD_PORGI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|34396327|gb|AAQ65394.1| aspartyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 587

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/596 (38%), Positives = 345/596 (57%), Gaps = 17/596 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61
           YRT++CG+L +S +   V L GWV RVR  GG+ F+D+RD YG TQ+V N DSA  E+  
Sbjct: 2   YRTNTCGELRLSHLQQTVTLCGWVQRVRRMGGMTFVDLRDRYGTTQLVFNRDSAPAELCD 61

Query: 62  -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +  EWV+   G VM RS++  N NI TG IE++  ++++L+ +E  P  +  E + 
Sbjct: 62  RAEDLGREWVIRATGTVMERSSK--NPNIPTGDIEIAVGEMDVLNRSEVPPFTIEDETDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  +  N+  R R+   +R  +  E F+E  TP+L  S+PEGARDF
Sbjct: 120 GDDLRMKYRYLDLRRHCVRSNMELRHRMALEVRKYLDGEGFLEVETPMLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNPGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+L+T E + + +F    +   +S  F R+ + DA++ YG+DKPD R  +   
Sbjct: 239 MSFVEQEDVLSTFEGMAKHLFRTIRHVE-ISEAFPRMTWHDAMKYYGSDKPDTRFDMRFV 297

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
            + +      F VF     +        I AKG G   R   D + ++ +         +
Sbjct: 298 ELMDVLKGHGFSVFDSAAYIG------GICAKGAGSYTRKQLDALTDFVKRPQVGAKGMV 351

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADARN 418
           + R++  G+V     V K       + +R  ++ + GD    ++GD L K      + R 
Sbjct: 352 YARVESDGSVK--SSVDKFYTQETLQELRRTMEAEPGDLILILSGDDLMKTRKQLCELRL 409

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  +LG+ + N F   W++DFP +EW+EE K+    H+PFT P+     L   D  +++
Sbjct: 410 EVGSQLGLRDKNKFSCLWVVDFPLFEWDEETKRFYAMHHPFTSPKPEDIPLLDTDPGAVR 469

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G IR H S +  + F  +G + E  + +FG L  AF+ G PPHGG
Sbjct: 470 ANAYDMVINGVEVGGGSIRIHDSALQQKMFELLGFTPEKAQEQFGFLMNAFKYGAPPHGG 529

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR V L  G  ++R+   FP +    D+++ +PS +   QL+EL L ++ N
Sbjct: 530 LAYGLDRWVSLFAGLDSIRDCIAFPKNNAGRDVMIDAPSVIDEAQLQELFLELIPN 585


>gi|194476856|ref|YP_002049035.1| aspartyl-tRNA synthetase [Paulinella chromatophora]
 gi|171191863|gb|ACB42825.1| aspartyl-tRNA synthetase [Paulinella chromatophora]
          Length = 607

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 239/617 (38%), Positives = 362/617 (58%), Gaps = 36/617 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H CGDL +++V + V+LSGWV R R HGG+IF+D+RD  G  Q+  +P+     F  A
Sbjct: 2   RSHGCGDLRITNVANSVQLSGWVDRFRDHGGVIFIDLRDQSGTIQIKVDPEQGPELFTQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119
           + +R+E VL ++G+V +R   +IN  + TG+IE+ A+ + +L SV    P  V    +  
Sbjct: 62  EHLRNETVLKVEGMVAARPTLSINERLSTGEIEVIAKSLTVLNSVNGTFPFSVSIHDDEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LDLRR+ ++ N+  R   + + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 VREELRLRYRYLDLRRERMNNNLRLRHNTVKAARRFLENEGFIEIETPLLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV  G ++ALPQ+PQ +KQLLM  G +RY+QIA CFRDED R+DR P EF Q+DM
Sbjct: 182 YLVPSRVCGGEWFALPQSPQIFKQLLMVGGIERYYQIARCFRDEDLRADRQP-EFTQIDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ Q +IL   E+++  +++E  +   +   F R+ + +A  RYGTD+PD R  + +
Sbjct: 241 EMSFMNQKEILRLNESLIASIWKEVKDIE-LQLPFTRMTWHEATERYGTDRPDARYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351
            N+++   + EF+VFS  ++     +  AIP     GN A          D + E A + 
Sbjct: 300 VNISDIVKNIEFKVFSSAIANGGSVKCIAIPE----GNDAISNTRIKPGGDILRE-AEAS 354

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLA+I  R+ E+G +  +G +  +L+      + +R   + G    F AGD      
Sbjct: 355 GAGGLAFI--RVRENGEIDSIGAIKNNLSEKQKLELLIRTGAEPGTLLLFGAGDTSTVNR 412

Query: 412 FAADARNHIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
                R +IA++L +I    +   + F W+ DFP +E+N+EE +++  H+PF  P   ++
Sbjct: 413 VLNRVRQYIARDLVLIASASDNKIWNFLWVTDFPMFEFNKEENRLEALHHPFCSPN--LK 470

Query: 468 SLKGND-------LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
            L G+D       L + +A  YDLV NG E+  G +R H SE+  Q    +G+S E  + 
Sbjct: 471 DL-GDDTANYRKRLPNARAQAYDLVLNGLELGGGSLRIHNSELQKQVLQTIGLSAEEAQR 529

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
           +FG L  A   G PPHGGIA G+DR+VMLL G +++R+   FP +Q    L+  +PS VS
Sbjct: 530 QFGFLMDALNMGAPPHGGIAFGLDRLVMLLAGEESIRDTIAFPKTQQARCLMTQAPSNVS 589

Query: 581 VEQLRELGLRIVENPKK 597
            +QL EL +    NP+K
Sbjct: 590 NKQLEELYVASTWNPEK 606


>gi|256391561|ref|YP_003113125.1| aspartyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256357787|gb|ACU71284.1| aspartyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 586

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/601 (39%), Positives = 342/601 (56%), Gaps = 25/601 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD G+ V L+GWV R R HGG+ FLD+RD  G  QVV     +  ++   
Sbjct: 3   RTHEAGTLRASDAGTTVTLAGWVARRRDHGGVTFLDLRDASGFVQVVVRESESVHDL--- 59

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YPE 122
            R+E+ +   G V  R     N ++ TG IE+    +E+LS A  LP P+   +     E
Sbjct: 60  -RNEYCVVATGEVRVRPEGNENPDLPTGAIEVVVDTVEVLSPAAPLPFPIDEHKSSNINE 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LD+RR+ + + +  R++    +R  M    F++  TP LT S+PEGARDFLV
Sbjct: 119 EMRLKYRYLDIRREPMARALRMRSKATKVIRDVMEEHGFLDVETPTLTRSTPEGARDFLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P R+  G++YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E S
Sbjct: 179 PVRLQPGTWYALPQSPQLFKQLLMVAGLERYYQIARCYRDEDFRADRQP-EFTQLDVEAS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+Q+DIL   E ++  V++E + G  +     R+ Y +A+ RYG+DKPDLR    +  +
Sbjct: 238 FVDQEDILRIGEAIVAAVWKE-TLGVEIPLPLPRMKYHEAMDRYGSDKPDLRFGQELTEL 296

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE+F  +EFRVF           V A+   GG    R   D   +WA+++G  GLAY+  
Sbjct: 297 TEYFAGTEFRVFQAPY-------VGAVVMPGGAAQTRKELDGWQDWAKARGARGLAYVV- 348

Query: 362 RLD-ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +D E+G +   GPVAK+L+  +   +  ++  + GD+ FF AG           AR  I
Sbjct: 349 -IDAETGEL--RGPVAKNLSEAHLAGLADKVGAKPGDAVFFAAGKRTASQELLGAARLEI 405

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNE----EEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +   +I  + ++F W++DFP +E  E    E+      H+PFT P          D  S
Sbjct: 406 GRRGALIEESAWKFLWVVDFPMFEPIEDAAGEQTGWHAVHHPFTAPTAESLDTFDKDPGS 465

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  YD+V NG E+  G IR H  +V  +AF  +G+S+E  +++FG L  AF  G PPH
Sbjct: 466 ALSNAYDIVLNGTELGGGSIRIHRKDVQERAFDAIGLSQEEAQSQFGFLLEAFNYGPPPH 525

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA G+DR+V LL GA  +R+V  FP +    D L G+P+ ++  Q +E G+  V   K
Sbjct: 526 GGIAFGLDRLVALLTGADTIRDVMAFPKTATGGDPLTGAPAPITAAQRKEAGVDAVYEAK 585

Query: 597 K 597
           K
Sbjct: 586 K 586


>gi|240081179|ref|ZP_04725722.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240124092|ref|ZP_04737048.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|260439925|ref|ZP_05793741.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|268597291|ref|ZP_06131458.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268682715|ref|ZP_06149577.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|291043203|ref|ZP_06568926.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|268551079|gb|EEZ46098.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268622999|gb|EEZ55399.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|291012809|gb|EFE04792.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 602

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 237/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLGIAGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +     F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GGFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           +++GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGA-DKAKVVNEAVGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRL 592


>gi|210616235|ref|ZP_03291015.1| hypothetical protein CLONEX_03236 [Clostridium nexile DSM 1787]
 gi|210149901|gb|EEA80910.1| hypothetical protein CLONEX_03236 [Clostridium nexile DSM 1787]
          Length = 602

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/597 (39%), Positives = 351/597 (58%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEI 61
           R+H C +L   ++G  V + GWV + R  GGI+F+D+RD  G+ Q++    S     FE 
Sbjct: 10  RSHRCAELSKVNIGETVTVMGWVQKNRNKGGIVFVDLRDRSGLLQLIFENGSVSEEDFEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+V+   G V +RS   +N N+ TG+IE+  +++ ILS +E  P P+    +  
Sbjct: 70  AGKLRSEFVIAAVGTVEARSG-AVNENLATGEIEIRVKELRILSESETPPFPIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR LDLRR  L +N++ R++     R  +  E F+E  TP+L  S+PEGARD+L
Sbjct: 129 EELRLKYRVLDLRRPDLQRNLMMRSKAATLTRQFLAEEGFLEIETPMLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G+FYALPQ+PQ +KQLLM +G+DRYFQI  CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGNFYALPQSPQIFKQLLMCAGYDRYFQIVKCFRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L  +F+E   G  VS    R+ + +A+ R+G+DKPD+R  + + +
Sbjct: 248 SFVDVDDVIDVNERLLAKMFKEIL-GIEVSLPIQRMTWQEAMDRFGSDKPDIRFGMELTD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V+E     EF VF   L    G  V  I AKG G   R   D++ + A+  G  GLAY+ 
Sbjct: 307 VSEVVKDCEFVVFKNAL--ENGGSVRGINAKGQGAMPRKKIDKLVDLAKDFGAKGLAYV- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +      AK ++     A+   +D ++GD   F A           + R  I
Sbjct: 364 -AIQEDGTIK--SSFAKFMSEEEMAALVKAMDGENGDLLLFAADKNQVVWDVLGNLRLEI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +++ N ++F WI +FP  EWNEE  +    H+PFTMP      L   D   ++A 
Sbjct: 421 ARQLELLDKNEYKFLWITEFPLLEWNEEAGRYTAMHHPFTMPMEEDLHLIDTDPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R    E+  + F  +G +KE  + +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTEIGGGSVRIFNQEIQSKMFEVLGFTKEQAQEQFGFLLNAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML+    ++R+V  FP  ++  DL+  +PS V  +QL EL L I +  ++
Sbjct: 541 YGLDRLVMLMAKEDSIRDVIAFPKVKDASDLMTEAPSGVDQKQLDELCLAITKKEER 597


>gi|309775570|ref|ZP_07670570.1| aspartate--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916664|gb|EFP62404.1| aspartate--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 581

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 222/590 (37%), Positives = 343/590 (58%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L VSD G  V L GWV + R  G ++F+D+RD  GITQ+V   D    +  + 
Sbjct: 3   RTHTNGELRVSDAGKEVTLIGWVAKRRNFGALVFIDLRDRTGITQLVF--DEQLSDAIRD 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E++L   G+VM R  +  N  + TG IE+  Q++ I++ AE  P+ V  E +  E  
Sbjct: 61  VRNEYILEAKGIVMERKDK--NPKLATGDIEVQVQQVTIINRAETTPIIVADETDALEDT 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  + + ++ R +I +SMR  + ++ FIE  TP+L  S+PEGARD+LVPS
Sbjct: 119 RLKYRYLDLRRPQMQQKLILRHKITHSMREYLDSKAFIEIETPMLGRSTPEGARDYLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ GSFYALPQ+PQ YKQLLM SGF+RY+Q A CFRDED R+DR   +F Q+D+E SF+
Sbjct: 179 RVHPGSFYALPQSPQLYKQLLMVSGFERYYQFARCFRDEDLRADR-QTDFTQVDLETSFL 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              +I   ME +L+ + ++   G  +S  F R+ + +A+ RYG+DKPD R  + + ++TE
Sbjct: 238 SDVEIQTMMEEMLQKLMKDV-KGKDISIPFPRLTWTEAMNRYGSDKPDNRFDLELQDITE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F H  F+VF+  ++     +   +P K  G  R   D++ + A+  G  GL  + +   
Sbjct: 297 LFEHCGFKVFADCIAAKGSIKAVVVPGK-AGMTRKEIDKITDLAKKNGAKGLVTLKYL-- 353

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
             G ++  GP+ K L+     ++  RL+++D D    ++      C      RNH   EL
Sbjct: 354 -EGTLS--GPIVKFLSEEEIHSLTQRLELKDHDLVLIVSDAWRTTCEVLGVLRNHFGAEL 410

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G+   N F + W+ DFP +E++EE+ +    H+PFT P+         D   + A  YD+
Sbjct: 411 GLKKTNEFSYLWVTDFPMFEYSEEDGRWYAMHHPFTRPRDEDMQYIDTDPGKVHAIAYDV 470

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG+E+  G +R +   +  + F  +G ++E ++  FG    A + G PPHGG+A G+D
Sbjct: 471 VLNGYELGGGSLRIYDGAMQDKMFEVLGFTEEKIQENFGWFVDALKYGTPPHGGLAFGLD 530

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           RI M+L  + ++R+V  FP + N    +  +P+ V   QL EL + + E 
Sbjct: 531 RIAMILSESDSIRDVIAFPKNANAKCPMSDAPTPVDGAQLEELHIAVREE 580


>gi|258404152|ref|YP_003196894.1| aspartyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257796379|gb|ACV67316.1| aspartyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 602

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 234/594 (39%), Positives = 345/594 (58%), Gaps = 14/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH    L   ++G  V L GWV   R HGG+IF+D+RD  G+TQ+V +P+        A
Sbjct: 18  RTHHLAALTSENLGQEVCLMGWVQFRRDHGGLIFIDLRDRRGLTQIVFSPEINEQAHAEA 77

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R E+VL + G V  R    +N  + TG+IE+   + ++L+VA+  P  +    E  E
Sbjct: 78  HVLRPEYVLAVKGTVRERPEGMVNPRLATGEIEVVVTEWKLLNVAQTPPFVLEERAEVSE 137

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R  +R+LD+RR  L  N+V R +   ++R  +   +F+E  TP+LT S+PEGARDFLV
Sbjct: 138 NVRLAHRYLDMRRPGLGSNLVVRHKATQAIRNYLDQLDFLEIETPVLTKSTPEGARDFLV 197

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+NQG FYALPQ+PQ +KQLLM  G DRY+QI  CFRDED R+DR P EF Q+DMEMS
Sbjct: 198 PSRLNQGEFYALPQSPQLFKQLLMYGGMDRYYQIVRCFRDEDLRADRQP-EFTQIDMEMS 256

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F E++D++   E ++  VF + + G  + N   R+ Y +A+ +YG D+PD R  +++  V
Sbjct: 257 FAEEEDVMGVAEGLVAEVFAK-TLGVDLPNPVPRMTYAEAVDKYGLDRPDTRFELLLEEV 315

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE    SEF++F++   V    +   +P +G    R   D + E+ +  G  GLA+I  +
Sbjct: 316 TELVRGSEFKLFAQAEMV----KALRVP-QGSELTRKEIDDLTEFVKIYGAKGLAWI--K 368

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + + G      P+AK L+     A+   L +Q GD  FF AG      +     R  + +
Sbjct: 369 IKDDG---WQSPIAKFLSDAECTALTDHLGLQSGDIVFFQAGGADMVNTALGQLRLRLGE 425

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              ++  + F+  WI DFP  EW++E ++    H+PFT  +    +    D  ++ A  Y
Sbjct: 426 RFDLVPADRFDLVWITDFPLMEWDDEAQRWVARHHPFTATREEDIAAMLEDPGAVIARSY 485

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG EI  G +R H SE   + F  +GI +   E +FG L RA + G PPH GIA G
Sbjct: 486 DLVLNGNEIGGGSVRIHRSEDQWRMFDALGIDRAEAEEKFGFLLRALEYGAPPHAGIAFG 545

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR++M+L GA+++R+V  FP +Q    LL  +PS V+  QLRELGLR+ E  K
Sbjct: 546 LDRLIMILCGAESIRDVIAFPKTQKATCLLTDAPSAVASTQLRELGLRLREKKK 599


>gi|227496189|ref|ZP_03926495.1| aspartate--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226834272|gb|EEH66655.1| aspartate--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 599

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 240/605 (39%), Positives = 345/605 (57%), Gaps = 38/605 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT + G L  +D+G  V L+GWV R R HGG+ F+D+RD  GI QVV        E+A  
Sbjct: 3   RTRTAGSLRRTDIGQTVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVIRE-----EVAHD 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL + G V +R     N N+ TG+IE+    +EIL+ +  LP  V    E   S+
Sbjct: 58  LRAEYVLQVTGEVSARPEGNANPNLPTGEIEVVVSDVEILNPSAPLPFQVSDHAEDAGSV 117

Query: 125 ----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R KYR+LDLRR ++   I  R+++  + R  + + +F+E  TP LT S+PEGARDF
Sbjct: 118 GEEARLKYRYLDLRRSSMQHAIRLRSQVSQAARKVLASHDFVEIETPTLTRSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 178 LVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIE 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D++   E+VL+ V+     G  +      + Y DA+ +YG+DKPDLR  + + 
Sbjct: 237 MSFVEQEDVIKVAEDVLKEVWALI--GYDLPTPIPHMTYKDAMEKYGSDKPDLRFGLELT 294

Query: 301 NVTEHFVHSEFRVFSKIL---SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           ++TE+F  + FRVF        V PG         G   +R   D   EWA+ +G  GLA
Sbjct: 295 DLTEYFKDTTFRVFQNEYVGSVVMPG---------GASQSRRTFDAWQEWAKQRGAKGLA 345

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+   + E G +   GPVAK++       +      + GD+ FF AG      +    AR
Sbjct: 346 YV--TVSEDGELG--GPVAKNITEAERAGLAEAAGAKPGDAIFFAAGGVDASRALLGAAR 401

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK-KIDFA---------HNPFTMPQGGME 467
             I +  G+I+ + + F W++D P ++ + E K + D A         H+ FT P+    
Sbjct: 402 LEIGKRCGLIDEDAWSFVWVVDAPLFKPSAEAKAEGDVALGKSAWTAVHHAFTSPKPEWL 461

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     A+ YD+VCNG EI  G IR H ++V  + F+ +GI +E  + +FG L  
Sbjct: 462 DSFDKDPGHALAYAYDIVCNGNEIGGGSIRIHRNDVQKRVFNVMGIGEEEAQAKFGFLLD 521

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPHGGIA G DRIV LL  A ++R+V  FP S    D L  +P+ ++ EQ +E 
Sbjct: 522 AFKFGAPPHGGIAFGWDRIVSLLTHADSIRDVIAFPKSGGGYDPLTDAPAPITPEQRKEA 581

Query: 588 GLRIV 592
           G+  V
Sbjct: 582 GVDTV 586


>gi|225076015|ref|ZP_03719214.1| hypothetical protein NEIFLAOT_01042 [Neisseria flavescens
           NRL30031/H210]
 gi|224952730|gb|EEG33939.1| hypothetical protein NEIFLAOT_01042 [Neisseria flavescens
           NRL30031/H210]
          Length = 602

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 237/598 (39%), Positives = 354/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRIDLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGA-DKAKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNVVDDKQLRELSLRL 592


>gi|284044470|ref|YP_003394810.1| aspartyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283948691|gb|ADB51435.1| aspartyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 596

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/587 (39%), Positives = 339/587 (57%), Gaps = 15/587 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR    G+L  +  G   R++GWVHR R HGG+IF+D+RD  GI Q+V +PD A      
Sbjct: 9   YRDAWAGELTAARAGQPARVAGWVHRRRDHGGLIFIDLRDRSGIVQLVFHPDQAPAAHRA 68

Query: 64  S--VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +  +RSE VL   G V+ R    +N N+ TG+IEL+  ++ +L+ +E  P P+  +    
Sbjct: 69  AHALRSEHVLSAVGEVVRREDGNVNPNLPTGEIELNVAELTVLATSETPPFPIDEDGPVD 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R ++R LDLRR  L + +  R +++++MR  +   +F+E  TPILT S+PEGARD+L
Sbjct: 129 ELLRLRHRTLDLRRAPLQEALKLRHQVVHTMRNVLTERDFMEIETPILTRSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G+FYALPQ+PQ +KQLLM  G++RY+QIA CFRDED R+DR P EF QLD+E+
Sbjct: 189 VPARIEPGAFYALPQSPQLFKQLLMIGGYERYYQIARCFRDEDTRADRQP-EFTQLDLEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV++DD++ TME+V+  +F   ++       + R+ YD+A+ R+G+D+PD R  + +  
Sbjct: 248 SFVDEDDVIETMESVMGAIFSA-TDFPVAPPAWPRMSYDEALLRFGSDRPDTRFGLEISE 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +   F  +EF+VF+  L+   G  V  + A      R   D + E AR  G  GL + F 
Sbjct: 307 LGSLFAGTEFKVFAGALAA--GGVVRGLNAGARELPRRELDALTELARQHGAKGLVWAFV 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D +       PVAK L+     A+   L+   GD    +A             R  +A
Sbjct: 365 QEDGTWR----SPVAKALSAEEIAAVTGALEASPGDLLLIVADSAAVAAQSLGALRLDLA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   ++  +  +  WI+DFP +E   +       H+PFT P G ++   G    +++   
Sbjct: 421 ERFSLVPEDRHDILWIVDFPMFE-PTDNGGWTAVHHPFTAPVGDLDGDPG----ALRGRG 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV +G EI  G IR +  EV  + F  +G+S E  + RFG L  AF+ G PPHGGIA 
Sbjct: 476 YDLVLDGSEIGGGSIRTNTPEVQQKVFEILGLSAEDAQARFGFLLDAFRYGAPPHGGIAM 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           G+DRIV LL G  ++R+V  FP +    D L G+P+ V   QLRELG
Sbjct: 536 GVDRIVTLLAGRDSIRDVIAFPKAATGADPLTGAPAPVDAAQLRELG 582


>gi|183982171|ref|YP_001850462.1| aspartyl-tRNA synthetase AspS [Mycobacterium marinum M]
 gi|183175497|gb|ACC40607.1| aspartyl-tRNA synthetase AspS [Mycobacterium marinum M]
          Length = 593

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 242/609 (39%), Positives = 342/609 (56%), Gaps = 30/609 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M   R+H+ G L  SD G  V L+GWV R R HGG+IF+D+RD  GI QVV   ++    
Sbjct: 1   MFVLRSHAAGALRDSDAGRQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFR-EADVLA 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +R+E+ + + G+V  R     N  I TG IE++A  + +L   E  PLP   +   
Sbjct: 60  QAHRLRAEFCVAVTGVVEIRPEGNANPEIATGDIEVNASSLTVLG--ECAPLPFQLDEPA 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRRD     I  R+++  + R  +   +F+E  TP +T S+PEGARDF
Sbjct: 118 GEELRLKYRYLDLRRDGPASAIRLRSKVNAAARAVLAGHDFVEIETPTITRSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDME
Sbjct: 178 LVPARLHPGMFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDME 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ +DI+   E +L  ++     G  +     RI Y DA+RR+G+DKPDLR  + + 
Sbjct: 237 LSFVDVEDIIAVSEEILTALWALI--GYRIPTPIPRISYADAMRRFGSDKPDLRFGLELV 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
              E F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+
Sbjct: 295 ECAEFFKDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEWAKQRGHRGLAYV 347

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              + E G +   GPVAK+L     + +   +    GD  FF AG      +    AR  
Sbjct: 348 L--VGEDGTLG--GPVAKNLTDAERDGLAAHVGASPGDCIFFSAGPVKASRALLGAARIE 403

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESL 469
           IA+ L +I+ + +EF W++D P +E  E+     D A         H+ FT P+  +E  
Sbjct: 404 IAERLNLIDPSAWEFVWVVDPPLFEPAEDATASGDVAVGSGAWTAVHHAFTAPKPELEDR 463

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
             +D  S+ A  YD+VCNG EI  G IR H  ++  + F+ +G+SK   E +FG L  AF
Sbjct: 464 IESDPGSVLADAYDIVCNGHEIGGGSIRIHRRDIQERVFAVMGLSKAEAEEKFGFLLEAF 523

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
             G PPHGGIA G DR+  LL GA ++R+V  FP +    D L  +P+ ++ +Q +E G 
Sbjct: 524 TFGAPPHGGIAFGWDRVSTLLAGADSIRDVIAFPKTGGGVDPLTEAPAPITAQQRKEAG- 582

Query: 590 RIVENPKKI 598
            I   PK++
Sbjct: 583 -IDAKPKQV 590


>gi|313680016|ref|YP_004057755.1| aspartyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152731|gb|ADR36582.1| aspartyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 584

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 243/597 (40%), Positives = 342/597 (57%), Gaps = 23/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH CG+L     G  V L GWV+R R  GG++FLD+RD  G+ QVV +P+S  F  A+ 
Sbjct: 3   RTHYCGELNERHEGERVLLQGWVNRRRDLGGLVFLDLRDRTGLVQVVVDPESPAFAEAER 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----FGEREY 120
           VR E+VL I+G V +R A+ +N  + TG++E++A ++E+L+ A   P PV     GE + 
Sbjct: 63  VRGEYVLEIEGTVRARPADQVNPELATGRVEVAAARLEVLNEAATPPFPVDASWRGEDDP 122

Query: 121 PESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            E +    R KYR+LDLRR  +   +  R  +I ++   + AE F++  TP LT S+PEG
Sbjct: 123 AERVNEDLRLKYRYLDLRRKPMLDRLRLRHTVIKAIWDFLSAEGFVQVETPFLTRSTPEG 182

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDFLVPSR+  G FYALPQ+PQ +KQ+LM +G DRYFQIA CFRDED R+DR P +F Q
Sbjct: 183 ARDFLVPSRLEPGKFYALPQSPQLFKQMLMIAGVDRYFQIARCFRDEDLRADRQP-DFTQ 241

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+EMSFV Q+DI    E ++  VF E + G  +   F R+ Y +A+ RYG+DKPD R  
Sbjct: 242 LDLEMSFVSQEDIWAINERLVAHVFRE-ALGVELPLPFPRMPYREALERYGSDKPDTRFG 300

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           + +      F +S F  F  +L           PA+    +R     + E A+  G  GL
Sbjct: 301 LELEPADALFANSNFNAFRSVLEAGGAVRGLRAPAEL---SRKQIAGLEEVAKRYGAKGL 357

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A++  ++ E G   G   +AK L+     A   R     G++  F+A             
Sbjct: 358 AWV--KVGEDGLSGG---IAKFLDDGALRAWGAR----PGETVLFVADRWNTALEALGQV 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +A  LGI   + + F W++DFP  EW+ + +   + H+PFT P      L  +D   
Sbjct: 409 RLALADLLGI-ERSGWNFLWVVDFPLLEWDSDLELWTYMHHPFTSPHPEDLPLLESDPGR 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YDLV NG E+  G IR H  E+  + F  +GI +E  E +FG    A + G PPH
Sbjct: 468 VRAQAYDLVLNGTEVGGGSIRIHRMELQQKMFDVLGIPREEAEEKFGFFLEALRYGAPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GGIA G+DR + L+ GA ++REV  FP +Q+  D L G+P+ VS EQL EL L+I E
Sbjct: 528 GGIAWGLDRFLALMSGAASIREVIPFPKNQSGRDPLTGAPAPVSPEQLAELHLKIEE 584


>gi|304389435|ref|ZP_07371398.1| aspartate--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304327245|gb|EFL94480.1| aspartate--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 599

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 240/601 (39%), Positives = 345/601 (57%), Gaps = 31/601 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH C +L ++  G  V L GWV R R HGG+ F+D+RD  GI Q+V +      E+ + 
Sbjct: 3   RTHKCAELNLNHDGQTVTLCGWVDRRRDHGGVAFMDLRDASGIVQLVVS-----EEVVRE 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE---YP 121
           VR+E+VL + G V  R     N +I TG+IE+ A  +EIL+    LP  V    E     
Sbjct: 58  VRNEYVLKVTGKVRKRPEGNENPDIATGEIEVMADDVEILNSCATLPFQVSEHAEDSKVG 117

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR +YRF+DLRR  LH N+V R+RI    R  M    F+E  TP LT S+PEGARDF+
Sbjct: 118 EDIRLRYRFVDLRRRQLHDNLVLRSRISQIARRVMEEHEFLEIETPTLTRSTPEGARDFV 177

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLLM  G +RYFQ+A C+RDED R+DR P EF QLDMEM
Sbjct: 178 VPARIRPGSWYALPQSPQLFKQLLMVGGMERYFQLARCYRDEDSRADRQP-EFTQLDMEM 236

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E++L+ +++    G  ++    R+ + +A+ R+G+DKPDLR    + +
Sbjct: 237 SFVDQDDVIEVTEHLLKEIWKVI--GYDLTTPIPRMPFQEAMDRFGSDKPDLRFGYELVD 294

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+ F  + F++F       P      +P  G    R F D+  EWA+++G  GLAY+  
Sbjct: 295 LTDFFKDTPFKIFQA-----PYVGAVVMPGGGSQPRRTF-DKWQEWAKARGAKGLAYV-- 346

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            LDE G     GPVAK+++      +      Q GD  FF AGD     +    AR  I 
Sbjct: 347 TLDEKGEAG--GPVAKNISDAEKVGLAAATGAQPGDCIFFAAGDKTASQTLLGAARLEIG 404

Query: 422 QELGIINCNCFEFCWIMDFPFYEWN-EEEKKIDFA---------HNPFTMPQGGMESLKG 471
           +   +I+   + F W++D P ++ + E E + D A         H+ FT P+        
Sbjct: 405 RRCNLIDEKAWAFTWVVDAPLFKPSGEAEAEGDVALGHSAWTAVHHAFTSPKPECLDTFD 464

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D  S  A+ YD+VCNG E+  G IR H  ++  + F  +G S+E  + RFG L  AF+ 
Sbjct: 465 TDPGSALAYAYDIVCNGVELGGGSIRIHRRDIQERVFKVMGFSQEEAQARFGFLLDAFKY 524

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G DRI  +L G+ ++R+V  FP + +  D L G+P+ ++ EQ +E G+  
Sbjct: 525 GAPPHGGLALGWDRIAGMLTGSPSIRDVIAFPKAGDGLDPLTGAPAPITDEQRKETGVDY 584

Query: 592 V 592
           V
Sbjct: 585 V 585


>gi|261401382|ref|ZP_05987507.1| aspartate--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269208589|gb|EEZ75044.1| aspartate--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 602

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRIGLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGA-DKTKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+E+  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEVGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|315655405|ref|ZP_07908305.1| aspartate--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315490345|gb|EFU79970.1| aspartate--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 599

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 240/601 (39%), Positives = 345/601 (57%), Gaps = 31/601 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH C +L ++  G  V L GWV R R HGG+ F+D+RD  GI Q+V +      E+ + 
Sbjct: 3   RTHKCAELNLNHDGQTVTLCGWVDRRRDHGGVAFMDLRDASGIVQLVVS-----EEVVRE 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE---YP 121
           VR+E+VL + G V  R     N +I TG+IE+ A  +EIL+    LP  V    E     
Sbjct: 58  VRNEYVLKVTGKVRKRPEGNENPDIATGEIEVMADDVEILNSCATLPFQVSEHAEDSKVG 117

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR +YRF+DLRR  LH N+V R+RI    R  M    F+E  TP LT S+PEGARDF+
Sbjct: 118 EDIRLRYRFVDLRRRQLHDNLVLRSRISQIARRVMEEHEFLEIETPTLTRSTPEGARDFV 177

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLLM  G +RYFQ+A C+RDED R+DR P EF QLDMEM
Sbjct: 178 VPARIRPGSWYALPQSPQLFKQLLMVGGMERYFQLARCYRDEDSRADRQP-EFTQLDMEM 236

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E++L+ +++    G  ++    R+ + +A+ R+G+DKPDLR    + +
Sbjct: 237 SFVDQDDVIEVTEHLLKEIWKVI--GYDLTTPIPRMPFQEAMDRFGSDKPDLRFGYELVD 294

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+ F  + F++F       P      +P  G    R F D+  EWA+++G  GLAY+  
Sbjct: 295 LTDFFKDTPFKIFQA-----PYVGAVVMPGGGSQPRRTF-DKWQEWAKARGAKGLAYV-- 346

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            LDE G     GPVAK+++      +      Q GD  FF AGD     +    AR  I 
Sbjct: 347 TLDEKGEAG--GPVAKNISDAEKVGLAAATGAQPGDCIFFAAGDKTASQTLLGAARLEIG 404

Query: 422 QELGIINCNCFEFCWIMDFPFYEWN-EEEKKIDFA---------HNPFTMPQGGMESLKG 471
           +   +I+   + F W++D P ++ + E E + D A         H+ FT P+        
Sbjct: 405 KRCDLIDEKAWAFTWVVDAPLFKPSGEAEAEGDVALGHSAWTAVHHAFTSPKPECLDTFD 464

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D  S  A+ YD+VCNG E+  G IR H  ++  + F  +G S+E  + RFG L  AF+ 
Sbjct: 465 TDPGSALAYAYDIVCNGVELGGGSIRIHRRDIQERVFKVMGFSQEEAQARFGFLLDAFKY 524

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G DRI  +L G+ ++R+V  FP + +  D L G+P+ ++ EQ +E G+  
Sbjct: 525 GAPPHGGLALGWDRIAGMLTGSPSIRDVIAFPKAGDGLDPLTGAPAPITDEQRKETGVDY 584

Query: 592 V 592
           V
Sbjct: 585 V 585


>gi|261838142|gb|ACX97908.1| aspartyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 577

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/589 (37%), Positives = 343/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYERALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKTRLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR  + ++    R+ +  + R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLSAYEIFKLRSEVALTARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+    G+ +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHHISKPFKRMPYKEAMENYGSDKPDLRFGLPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  + D Q GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTDAQTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|188588113|ref|YP_001920365.1| aspartyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|238689665|sp|B2V351|SYD_CLOBA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|188498394|gb|ACD51530.1| aspartyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 599

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 243/602 (40%), Positives = 358/602 (59%), Gaps = 25/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+     VG  + L GWV R R  GG+ F+D+RD  GI QVV   +  +  FE A
Sbjct: 10  RTMMCGEPREEHVGQKITLMGWVQRNRKLGGLDFIDLRDKTGIMQVVFGEEINAEAFEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K VR E+ + + G V+ R  E++N N+ TG +EL  Q ++ILS +E  P+ +    +  E
Sbjct: 70  KGVRPEYCIAVTGEVVKR--ESVNENMPTGFVELKCQSLKILSESETPPIYIKENLDAAE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR  +H+    R++   S+R  +   +F++  TP+LT S+PEGARD+LV
Sbjct: 128 NIRLKYRYLDLRRPDMHRIFEIRSKTTKSIRDYLEKNDFLDVETPMLTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYPGMFYALPQSPQIFKQLLMVSGFDKYYQIVKCFRDEDLRANRQP-EFTQVDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDDI+   E ++  VF+E + G  V     R+ + DA+ +YG+DKPDLR  + + N+
Sbjct: 247 FVEQDDIMALNEGLIAHVFKEVA-GVDVKLPIKRMTFKDAMEKYGSDKPDLRFGMEITNI 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE     +F VF    ++  G  V A+  KGG    R   D++ E+ ++    GLA+I  
Sbjct: 306 TEDVKDMDFVVFKS--AIEAGGSVRALCLKGGAALGRKPLDKLGEFVKTYKAKGLAWI-- 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           +L E G  +    +AK L    T +I   +  + GD+   +A  + + F S  A  R  +
Sbjct: 362 QLKEDGVKSS---IAKFLTDDVTNSIIETMGAETGDAILIVADKESVVFQSLGA-LRLEL 417

Query: 421 AQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESLKGNDLL 475
           A++  +I + N F F WI +FP +E++EEE++    H+PFT P       +ES  G    
Sbjct: 418 AKQFELIKDKNEFNFTWITEFPLFEYSEEEERYTACHHPFTAPMEEDLDFLESAPGK--- 474

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            +++  YDLV NG E+  G IR H  E+  + F  +G ++E    RFG L +AF+ G PP
Sbjct: 475 -VRSKAYDLVLNGEELGGGSIRIHDMELQQRMFKALGFTEEQAWERFGFLLQAFKFGPPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGG+A G+DR++M L G +N+++V  FP +QN    L  +P+    +QL ELG+ I+   
Sbjct: 534 HGGLAFGLDRMIMFLAGTENIKDVIAFPKNQNAYCYLSEAPNIADEKQLTELGIGILPKQ 593

Query: 596 KK 597
           +K
Sbjct: 594 EK 595


>gi|19552847|ref|NP_600849.1| aspartyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62390518|ref|YP_225920.1| aspartyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|24212396|sp|Q8NQ19|SYD_CORGL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|21324404|dbj|BAB99028.1| Aspartyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41325855|emb|CAF21644.1| PROBABLE ASPARTYL-TRNA SYNTHETASE PROTEIN [Corynebacterium
           glutamicum ATCC 13032]
          Length = 608

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 248/611 (40%), Positives = 340/611 (55%), Gaps = 39/611 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63
           RTH  G+L   + G  V L+GWV+R R HGG+IF+D+RD  GI QVV  N D A  E A 
Sbjct: 3   RTHLSGELRKENAGQSVTLTGWVNRRRDHGGVIFIDLRDRTGIAQVVFRNEDVA--ERAH 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER---EY 120
           ++RSE+VL + G+V  R   + N N+ +G IE+S  + E+L+ +  LP  +       E 
Sbjct: 61  ALRSEFVLRVTGVVEERPEGSQNPNLASGDIEVSVTEFEVLNESAPLPFQIEDSSSAGEV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR      +  R+    + R  + + +F E  TP LT S+PEGARDF
Sbjct: 121 GEETRLKYRYLDLRRPVQANALRLRSAANKAARTVLDSHDFTEIETPTLTRSTPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  G+FYALPQ+PQ +KQLL  +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 181 LVPARLRPGTFYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++   E ++  V++    G  +     R+ Y DA+RRYG+DKPDLR  I + 
Sbjct: 240 MSFVDQDDVIALGEEIISEVWKLI--GYEIKTPIPRMTYADAMRRYGSDKPDLRFDIEIT 297

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
             TE F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAYI
Sbjct: 298 ECTEFFQDTTFRVFKNEY-------VGAVVMTGGASQPRRQLDAWQEWAKQRGAKGLAYI 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              + E G ++  GPVAK++       I   +  Q GD  FF AGD     +    AR  
Sbjct: 351 L--VGEDGELS--GPVAKNITDAERAGIAAHVGAQPGDCIFFAAGDTKSSLALLGAARGE 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQ----GG 465
           IA++L +I    + F WI+D P +E   +            K    H+ FT P+      
Sbjct: 407 IAKKLDLIKEGDWAFTWIVDAPMFEPAADATASGDVALGNSKWTAVHHAFTSPKPEFLDN 466

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
            ++  G+ L    A+ YD+VCNG EI  G IR H  +V  + F  +GI+ E    +FG L
Sbjct: 467 FDTNPGDAL----AYAYDIVCNGNEIGGGSIRIHQRDVQERVFEVMGITGEEAREKFGFL 522

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             AF  G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ ++ +Q +
Sbjct: 523 LDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGIDPLTDAPAAITPQQRK 582

Query: 586 ELGLRIVENPK 596
           E G+     PK
Sbjct: 583 EAGIDAKPKPK 593


>gi|225159378|ref|ZP_03725674.1| aspartyl-tRNA synthetase [Opitutaceae bacterium TAV2]
 gi|224802039|gb|EEG20315.1| aspartyl-tRNA synthetase [Opitutaceae bacterium TAV2]
          Length = 599

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/606 (38%), Positives = 353/606 (58%), Gaps = 26/606 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--AC 58
           M   RTH C  L  +D+G+ V L GWV  +R HGGI+F+D+RD  GITQV  +P S  A 
Sbjct: 1   MKLQRTHHCAQLTKADLGASVSLLGWVDSIRDHGGILFIDLRDRKGITQVKFDPQSNPAL 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FG 116
              A +++ E V+ +DG V++R   T+NA++ TG+IE+ A  + I ++++  P P+    
Sbjct: 61  AAQAATLKPESVIGVDGKVVARPEGTVNASLPTGEIEVDATALTIHNISDTPPFPLDDAA 120

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             +  E +R  YR+LDLRR  + KN+  R R   ++R    A+ FIE  TP L  S+PEG
Sbjct: 121 ADKVNEDLRLTYRYLDLRRPKMRKNLQVRHRATKAIRDYFDAQEFIEVETPALFKSTPEG 180

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR++LVPSR++ G FYAL Q+PQQ+KQ+LM +G +RYFQIA CFRDED R+DR   EF Q
Sbjct: 181 AREYLVPSRIHPGEFYALSQSPQQFKQILMVAGVERYFQIARCFRDEDLRADR-QMEFTQ 239

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +D+E SF+ ++D+    E +L+ V+++  N + +     R+ + +A+ R+G DKPDLR  
Sbjct: 240 VDVEASFITREDVYALFEGMLKKVWKDILNVD-IPAPIQRMPFHEAMNRFGVDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPG 355
           + + ++T+ F  S F+VF    +V  G  + AI AKG     +     + + A+S G  G
Sbjct: 299 LELTDLTKTFKTSAFKVFQA--TVAGGGVIKAINAKGLADLTQGELKNLEDIAKSLGAKG 356

Query: 356 LAYIFWRLDESGNVAG---MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
           LA+I         V G     P+ K  +     A+  +L + +GD  FF A    K C+ 
Sbjct: 357 LAFI--------KVEGGEWKSPIVKFFSDAEKAALTQQLGIAEGDMIFFAAAPWEKACAI 408

Query: 413 AADARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
               R   AQ L       I+ N ++F W++DFP   ++EE       H+PFT P     
Sbjct: 409 LGRIRLEAAQLLVKRGKLTIDPNDWKFLWVVDFPLMSYDEERGGYAATHHPFTAPVPEDI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLY 526
            L  +D  +++   YDLV NG E+  G IR H   +  + F +V  I ++VVE+RFG + 
Sbjct: 469 HLLDSDPKAVRGQHYDLVLNGMELGGGSIRIHQPALQKKVFEDVLKIPQDVVESRFGYML 528

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           +AF  G PPHGGIA G+DR+V LL G  ++R+V  FP +Q   DL+  SP+ V+ +QL+E
Sbjct: 529 KAFTYGAPPHGGIAFGLDRMVALLCGTTSIRDVIAFPKTQKGQDLMAQSPTPVTAKQLKE 588

Query: 587 LGLRIV 592
           L ++ V
Sbjct: 589 LHIQTV 594


>gi|332654810|ref|ZP_08420552.1| aspartate--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332516153|gb|EGJ45761.1| aspartate--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 599

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 239/595 (40%), Positives = 340/595 (57%), Gaps = 18/595 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61
           +RT+ CG+L +SD G  V + GWV R R  GG+IF+D+RD  G+ Q+    + D A FE 
Sbjct: 8   HRTNYCGELRLSDAGKTVSVCGWVQRQRDLGGLIFVDLRDRTGLVQLSFDDSTDKAIFEK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A ++RSE+V+   GLV  R ++T    I TG IE+   ++ +L+ AE  P  +    +  
Sbjct: 68  ASTLRSEYVIAATGLVRERESKT--NKIATGDIEIYVSELRLLAKAETPPFEIVENSKAN 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  +   I  R ++    R     + F+E  TP+LT S+PEGARD+L
Sbjct: 126 DMLRLKYRYLDLRRPDMQHAIATRHKVTKICRDYFDEQGFLEIETPMLTKSTPEGARDYL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQQYKQLLM SGFDRY QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 186 VPSRVHPGKFYALPQSPQQYKQLLMLSGFDRYMQIARCFRDEDLRADRQP-EFTQIDLEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV +DD++   E  L+ VF+E  + + V   FLR+ + +A+ R+G+DKPDLR    + +
Sbjct: 245 SFVNEDDVMGIQEGFLKRVFKEVLDVD-VQTPFLRMPWREAMDRFGSDKPDLRFGFELKD 303

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
           +++      F VFS   +V  G  V  I   G   +  R   D++ E+ ++    GLA  
Sbjct: 304 ISDIVKDCGFGVFSG--AVQGGGSVRLINVNGHAADFPRKKIDKLGEFVKTYKAKGLA-- 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA--DAR 417
            W     G V       K L     +AI  R   +DGD    I GD      FAA    R
Sbjct: 360 -WTRMHDGQVT--SSYQKFLTEEENKAILERAGAKDGD-LILIVGDVKDEVVFAALGALR 415

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
              A++LG+++   F+F W+ +FP +E++EEE +    H+PFT P          D  + 
Sbjct: 416 CECAKQLGLLDPKDFKFLWVTEFPMFEYSEEEGRYVAMHHPFTAPMDEDLDKLETDKKNC 475

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR  + E     F  +G S E  + RFG L  AF+ G PPHG
Sbjct: 476 RAKAYDIVLNGTELGGGSIRISVPETQQAMFRALGFSDEDAQERFGHLINAFKFGAPPHG 535

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+A G+DR+ ML+ GA+++R+V  FP  QN  + +   P  V  +QL +L L + 
Sbjct: 536 GLAYGLDRLCMLMAGAESIRDVIAFPKVQNASEPMTNCPDFVDDKQLDDLSLAVT 590


>gi|317180387|dbj|BAJ58173.1| aspartyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 577

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/589 (37%), Positives = 343/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++DD++  +E++L+ +F+    G+T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DEDDVMGVVEDLLQEIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|326560762|gb|EGE11129.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326566601|gb|EGE16744.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
 gi|326569626|gb|EGE19678.1| aspartyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326570845|gb|EGE20869.1| aspartyl-tRNA synthetase [Moraxella catarrhalis BC7]
 gi|326574392|gb|EGE24334.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
 gi|326576426|gb|EGE26335.1| aspartyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 597

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/603 (38%), Positives = 356/603 (59%), Gaps = 20/603 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +   + ++GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 2   RSTYCGQVTEELIDQTITIAGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
           + RSE++L I G V  R   T N N+++GQ+EL  ++IE+L+ ++  P P+  +     E
Sbjct: 62  AARSEYLLKITGRVRRRYEGTENPNMVSGQVELLGKEIELLAKSDTPPFPLNDDNITVSE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLD+RR  + + +  R +  +++R  +    F++  TP+LT ++PEGARD+LV
Sbjct: 122 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  QG+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 182 PSRTRQGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I++  E + + +F+     +   + F R+ Y DA+R Y +DKPDLR P+ + +V
Sbjct: 241 FLSDEEIMDITEGLTKNLFKTML--DVEFDTFPRMTYADAMRDYASDKPDLRIPLKLIDV 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +   H EF+VFS       G  V      GG  +R   D   ++    G  GLAYI  +
Sbjct: 299 ADIMQHVEFKVFSGPAQDPKGRVVALRIPNGGNMSRKQIDEYTKFVGIYGARGLAYI--K 356

Query: 363 LDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           ++++ N+       +G+  P+ K++       +  R D Q GD  FF   D  K  + A 
Sbjct: 357 VNDASNINNGVEKESGLQSPIIKNMTDEVLIELIERTDAQTGDIIFF-GADKAKIVNDAM 415

Query: 415 DA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            A R  I  +L +  C  +   W++DFP +E  ++ K     H+PFT P+G +E LK + 
Sbjct: 416 GALRVKIGTDLNLFTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTRPKGSVEELKQSP 473

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             ++ +  YD+V NG EI  G +R +  ++    F  +GISKE  E +F  L  A + G 
Sbjct: 474 ETAL-SIAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKEEAELKFKFLMDALRFGA 532

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V   QLRELG+RI E
Sbjct: 533 PPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTEAPAEVDNRQLRELGIRIRE 592

Query: 594 NPK 596
             K
Sbjct: 593 KQK 595


>gi|296137210|ref|YP_003644452.1| aspartyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295797332|gb|ADG32122.1| aspartyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 599

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/602 (38%), Positives = 353/602 (58%), Gaps = 15/602 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CG +  + +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD +A F  A+
Sbjct: 4   RSQYCGQVTEAQLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAAMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + GLV  R A T N  + +G+IE+    I +L+ +   P  +  +    E+
Sbjct: 64  GLRNEFCVQVQGLVRPRPAGTENEGMTSGKIEVLCHDITVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+  ++R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLKLRYRVAMAVRRFLDGQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQ+LM +GFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGEFFALPQSPQLFKQMLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++RGVF++  N   ++N +  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LSEQEIRDLFETMIRGVFKDVLN-IELANPYPVMTYAEAMARFGSDKPDLRVKMEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +  PG  V A+   GGG  +R+  D   E+ +  G  GLA+I   
Sbjct: 301 DVMADVDFKVFSGP-ATTPGGRVVALRVPGGGEMSRSEIDAYTEFVKIYGAKGLAWIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416
               G      P+ K+L+     A+  R   Q+GD  FF A D  K  + A         
Sbjct: 360 DVSKGRDGLQSPIVKNLHDAAIAAVLQRSGAQNGDLLFFGA-DKSKIVADAIGGLRVKIG 418

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +   +  G+ + N ++  W++DFP +E++E+ ++    H+PFT P+ G E L       
Sbjct: 419 HSEFGKSHGLFD-NVWKPLWVVDFPMFEFDEDNQRWAAVHHPFTAPKDGHEELMDTAPEK 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G +R H +EV  + FS + I  +    +FG L  A Q G PPH
Sbjct: 478 CIAKAYDMVLNGWEIGGGSVRIHRAEVQSKVFSALKIGPDEARAKFGFLLDALQYGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QL+EL +R+  NP+
Sbjct: 538 GGIAFGLDRIVTMMTGAQSIRDVIAFPKTQRAQCLLTNAPSPVDEKQLKELHIRL-RNPQ 596

Query: 597 KI 598
            +
Sbjct: 597 PV 598


>gi|331002008|ref|ZP_08325528.1| aspartyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411804|gb|EGG91209.1| aspartyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 594

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/594 (39%), Positives = 349/594 (58%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           R+H C ++  +   S V + GWV + R  GGIIF D+RD  GI Q++   +   S  F  
Sbjct: 10  RSHRCAEVVNATFESEVTVMGWVQKNRNKGGIIFCDLRDRSGILQIIFEEEECGSEVFNK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  ++ E+ + + G++  RS    N ++ TG++E+ A  + ILS +E  P  +  + +  
Sbjct: 70  AMKLKQEFCIAVTGILKKRSG-AFNESLKTGELEVRATGLRILSESETPPFHIEEDSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYRFLDLRR  L +N++ R+++  + R  +    F+E  TP L  SSPEGARD+L
Sbjct: 129 EELRLKYRFLDLRRPDLQRNLMVRSKVATTTRNFLAENGFLEIETPTLIKSSPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  GSFYALPQ+PQ +KQLLM SG+DRYFQ+A C+RDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVYPGSFYALPQSPQLFKQLLMVSGYDRYFQLARCYRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+L+  E +L+ +F++  + + VS    R+ + +A+ R+G+DKPDLR  + + +
Sbjct: 248 SFVDVDDVLDVNERLLQRLFKDVLDID-VSLPIQRMTWQEAMDRFGSDKPDLRFGMELKD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V+    +SEF VF   L+   G  V  I A G  G  R   D + E+ +S    GLAY+ 
Sbjct: 307 VSNVVANSEFAVFKNALA--SGGSVRGINATGQAGMPRKKIDALVEFVKSYRAKGLAYM- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             ++  GN+      AK +     E ++  +D + GD  FF A             R  +
Sbjct: 364 -AIEADGNIK--SSFAKFMTEAEIEGLKQAMDAKPGDMLFFAADSNKIVWDTLGALRVEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A +LG++  + ++F W+  FP  EW+EEE +    H+PFT P         +D   ++A 
Sbjct: 421 ASQLGLLKKDDYKFLWVTQFPLLEWSEEENRFKAMHHPFTAPMDEDWQYIDSDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H  +V  + F  +G+ KEV + RFG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTEIGGGSVRIHQGDVQAKMFEVLGLIKEVAQERFGYLLEAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+VML++ A ++R+V  FP  ++  DL+  +P  V   QL+ELGL I E 
Sbjct: 541 YGLDRVVMLMVEADSIRDVIAFPKVKDASDLMTNAPDRVDDAQLKELGLIIKEE 594


>gi|118462335|ref|YP_882629.1| aspartyl-tRNA synthetase [Mycobacterium avium 104]
 gi|166225363|sp|A0QI91|SYD_MYCA1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|118163622|gb|ABK64519.1| aspartyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 591

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 241/605 (39%), Positives = 337/605 (55%), Gaps = 30/605 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63
           R+H+ G L  SD G  V L+GWV R R HGG+IF+D+RD  GITQVV  +PD    + A 
Sbjct: 3   RSHAAGSLRSSDAGQQVTLAGWVARRRDHGGVIFIDLRDASGITQVVFRDPD--VLKQAH 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + GLV  R     N  I TG IE++A  + +L   E  PLP   +    E 
Sbjct: 61  RLRAEFCVAVAGLVEIRPEGNANPEIATGDIEVNASSLTVLG--ESAPLPFQLDEPAGEE 118

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRRD     I  R+++  + R  +   +F+E  TP +T S+PEGARDFLVP
Sbjct: 119 LRLKYRYLDLRRDAPAAAIRLRSKVNAAAREVLDRHDFVEIETPTITRSTPEGARDFLVP 178

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSF
Sbjct: 179 ARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSF 237

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+ +D++   E +L  ++     G  +     RI Y DA+ RYG+DKPDLR  + +   +
Sbjct: 238 VDAEDVIAISEEILAALWALI--GYEIPRPIPRISYADAMARYGSDKPDLRFGLELVECS 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWR 362
           E F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   
Sbjct: 296 EFFKDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEWAKQRGAKGLAYVL-- 346

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G +   GPVAK+L+      +   +    GD  FF AG      +    AR+ IA 
Sbjct: 347 VGEDGELG--GPVAKNLSEAERAGLAGHVGAAPGDCIFFAAGPAKPSRALLGAARSEIAH 404

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGN 472
            LG+I+   + F W++D P +E  ++     D A         H+ FT P+ G E     
Sbjct: 405 RLGLIDPQAWAFVWVVDPPLFEPADDATAAGDVAVGSGAWTAVHHAFTAPKPGYEDAIET 464

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D  ++ A  YD+VCNG EI  G IR H  ++  + F+ +G+       +FG L  AF  G
Sbjct: 465 DTGNVLADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDNAEAREKFGFLLEAFTFG 524

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G DRI  LL    ++REV  FP +    D L  +P+ ++ +Q +E G+ + 
Sbjct: 525 APPHGGIAFGWDRINALLSRVDSIREVIAFPKTGGGVDPLTDAPAPITEQQRKESGIDVK 584

Query: 593 ENPKK 597
             P K
Sbjct: 585 PEPSK 589


>gi|124266262|ref|YP_001020266.1| aspartyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|166225361|sp|A2SEP2|SYD_METPP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|124259037|gb|ABM94031.1| aspartyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 599

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 242/597 (40%), Positives = 343/597 (57%), Gaps = 12/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GW HR R HGG+IF+D+RD  G+ QVV +PD A  F+ A+
Sbjct: 2   RTTYCGLVSEMLLGQTVTLMGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L I G V +R A T NAN+++G++EL   ++E+L+ +   P  +  +    E+
Sbjct: 62  GVRNEFCLKIVGKVRARPAGTENANLVSGKVELLCHELEVLNPSVTPPFQL-DDDNLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + KN++ R R+   +R  + A  FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPAMQKNLILRYRVAMEVRKFLDANGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN+G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVNEGMFFALPQSPQLFKQLLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++++I    E ++R VF    N        ++  Y +A+ R+G+DKPDLR  +    +T
Sbjct: 240 LDEEEIRGMFEGMIRTVFRAVMNVELPGYPVMK--YAEAMHRFGSDKPDLRVKMEFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E     +F+VFS       G  V      GG  +R+  D   E+ +  G  GLA+I    
Sbjct: 298 EVMKDVDFKVFSAPAQAKGGRVVALRVPGGGEMSRSEIDGYTEFVKIYGAKGLAWIKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422
              G      P+ K+L+      I  R   ++GD  FF A D  K  + A  A R  I  
Sbjct: 358 ASKGREGLQSPIVKNLHDAAIAEIIARSGARNGDLLFFGA-DKAKVVNDAIGALRVKIGH 416

Query: 423 ELGIINCNCFEF----CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
                +   FE      W++DFP +E +EE  +    HNPFT P+ G E L   D     
Sbjct: 417 SDFGKSGGLFEDKWAPLWVVDFPMFEHDEEGDRWAAVHNPFTAPKDGHEDLMDTDPGKCI 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R H +EV  + FS + I  +  + +FG L  A Q G PPHGG
Sbjct: 477 AKAYDMVLNGWELGGGSVRIHRAEVQSKVFSALKIGPDEAQLKFGFLLDALQYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           +A G+DR+V L+  A ++R+V  FP +Q   DLL  +PS V  +QLREL +R+  NP
Sbjct: 537 LAFGLDRLVTLMTKADSIRDVIAFPKTQRAQDLLTHAPSPVDEKQLRELHIRL-RNP 592


>gi|293602542|ref|ZP_06684988.1| aspartate--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292819304|gb|EFF78339.1| aspartate--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 595

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 234/594 (39%), Positives = 347/594 (58%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT   G +    +G  V L GWV+R R HGG+IF+D+RD  G+ Q+V +PD+A F  A+ 
Sbjct: 2   RTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRAGLAQIVFDPDNAAFATAER 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + GLV  R A T N+ + +G+IE+  +++EIL+ +   P  +  +    E+ 
Sbjct: 62  LRNEFCVRVTGLVRERPAGTANSELASGEIEVLCKEVEILNASVTPPFQL-DDDNLSETT 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  +R LDLRR  + +N++ R R+    R  +    FI+  TP+L  S+PEGARD+LVPS
Sbjct: 121 RLTHRVLDLRRPQMQRNLMLRYRVSIETRKFLDQLGFIDIETPMLAKSTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF+
Sbjct: 181 RVNAGHFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSFL 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            + +I    EN++R VF+    G  +++ F  + + +A+RRYG+DKPDLR  +   ++T+
Sbjct: 240 NEFEIREIFENLIRHVFK-VVQGVDLASPFPIMPWTEAMRRYGSDKPDLRVKLEFTDMTD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363
                +F+VF+   +  PG  V A+   GG   +R+  D   ++    G  GLAYI    
Sbjct: 299 VMRDVDFKVFAAAATA-PGSRVVALRVPGGAEMSRSEIDGYTQFVGIYGAKGLAYIKVNE 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+      +  R   QDGD  FF A D  K  + A  A       
Sbjct: 358 VAKGRDGLQSPIVKNLHDAALAELVKRTGAQDGDIIFFGA-DREKVVNDAIGALRVKIGH 416

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   ++ G+     ++  W++DFP +E++EE+ +   AH+PFT P+ G E     D    
Sbjct: 417 SEFGKKTGLFEAG-WQPLWVVDFPMFEYDEEDGRYTAAHHPFTSPKDGHEDFLETDPSKA 475

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 476 FAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQEKFGYLLVALQYGAPPHG 535

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DRIV ++ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+
Sbjct: 536 GIAFGLDRIVTMMTGAESIRDVIAFPKTQRAQDLLTQAPSEVDEKQLRELHIRL 589


>gi|326576013|gb|EGE25936.1| aspartyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 598

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/603 (38%), Positives = 356/603 (59%), Gaps = 20/603 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +   + ++GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RSTYCGQVTEELIDQTITIAGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
           + RSE++L I G V  R   T N N+++GQ+EL  ++IE+L+ ++  P P+  +     E
Sbjct: 63  AARSEYLLKITGRVRRRYEGTENPNMVSGQVELLGKEIELLAKSDTPPFPLNDDNITVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLD+RR  + + +  R +  +++R  +    F++  TP+LT ++PEGARD+LV
Sbjct: 123 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  QG+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRTRQGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I++  E + + +F+     +   + F R+ Y DA+R Y +DKPDLR P+ + +V
Sbjct: 242 FLSDEEIMDITEGLTKNLFKTML--DVEFDTFPRMTYADAMRDYASDKPDLRIPLKLIDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +   H EF+VFS       G  V      GG  +R   D   ++    G  GLAYI  +
Sbjct: 300 ADIMQHVEFKVFSGPAQDPKGRVVALRIPNGGNMSRKQIDEYTKFVGIYGARGLAYI--K 357

Query: 363 LDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           ++++ N+       +G+  P+ K++       +  R D Q GD  FF   D  K  + A 
Sbjct: 358 VNDASNINNGVEKESGLQSPIIKNMTDEVLIELIERTDAQTGDIIFF-GADKAKIVNDAM 416

Query: 415 DA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            A R  I  +L +  C  +   W++DFP +E  ++ K     H+PFT P+G +E LK + 
Sbjct: 417 GALRVKIGTDLNLFTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTRPKGSVEELKQSP 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             ++ +  YD+V NG EI  G +R +  ++    F  +GISKE  E +F  L  A + G 
Sbjct: 475 ETAL-SIAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKEEAELKFKFLMDALRFGA 533

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V   QLRELG+RI E
Sbjct: 534 PPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTEAPAEVDNRQLRELGIRIRE 593

Query: 594 NPK 596
             K
Sbjct: 594 KQK 596


>gi|318040800|ref|ZP_07972756.1| aspartyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 609

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/604 (38%), Positives = 345/604 (57%), Gaps = 30/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R+H CGDL     G  V+L GWV R R HGG+IF+D+RD  G  Q+  +PD+    F +A
Sbjct: 2   RSHGCGDLRPDATGQAVQLCGWVDRSRDHGGVIFIDLRDRSGTVQITVDPDNGAEMFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELP--LPVFGERE 119
           + +R+E V+ ++G V  R  + IN  + TG++E+ A  I +L SV   LP  + V  E  
Sbjct: 62  EHLRNETVIQVEGKVRERPTDAINEKLATGRVEVLASAITVLNSVKGNLPFAVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR+ ++ N+  R + I + R  +  + FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRERMNSNLRLRAQTIQAARRFLEDQGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLDM
Sbjct: 182 YLVPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q+ IL   E+++  +++    G  +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQEQILELNESLIASIWKTV-KGVELPRPFPRLTWHDAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351
            NV++      F+VFS  ++     +  A+P    GGN A          D  +E A+  
Sbjct: 300 TNVSDLVADMGFKVFSGAVAAGGSVKCIAVP----GGNDAVSNVRIKPGGDVFSE-AQKA 354

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLA+I  R+ E G +  +G +  +L+      +  R   + G    F AGD      
Sbjct: 355 GAGGLAFI--RVREGGEIDTIGAIKDNLSEEKKAELLQRTGAEPGTLILFGAGDTATVNK 412

Query: 412 FAADARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ---- 463
                R ++A+ELG++      + + F W++DFP +E+N +E + +  H+PF  P     
Sbjct: 413 ALDRVRQYLARELGMVKPDSENDSWNFLWVVDFPMFEFNADENRYEALHHPFCAPNTDDL 472

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
           G   S   + L   +A  YDLV NG E+  G +R H S +  Q    VG+  E    +FG
Sbjct: 473 GNDPSAWADTLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEANQQFG 532

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            L  A   G PPHGG+A G+DR+VMLL G +++R+   FP +Q    L+ G+P  V+ +Q
Sbjct: 533 FLMEALDMGAPPHGGLAFGLDRMVMLLAGEESIRDTIAFPKTQQARCLMTGAPGGVATKQ 592

Query: 584 LREL 587
           L EL
Sbjct: 593 LEEL 596


>gi|239817091|ref|YP_002946001.1| aspartyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|259511873|sp|C5CWX8|SYD_VARPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|239803668|gb|ACS20735.1| aspartyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 601

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/603 (39%), Positives = 354/603 (58%), Gaps = 18/603 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD +A F +A+
Sbjct: 4   RTHYCGLVTEALMGQTVTLCGWVNRRRDHGGVIFIDVRDREGYVQVVCDPDRAATFAVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + GLV +R   T N  + +G+IE+   ++++L+ +   P  +  +    E+
Sbjct: 64  NLRNEFCVQVTGLVRARPEGTTNDQLKSGKIEVLCHELKVLNPSVTPPF-LLDDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + +N++ R ++    R  + A  FI+  TP+L  S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPAMQRNMMLRYKVTMETRKFLDANGFIDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ GSF+ALPQ+PQ +KQLLM +G+DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRVHDGSFFALPQSPQLFKQLLMVAGYDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    E ++R VF   +  +     F  + Y DA+ +YG+DKPDLR  +    +T
Sbjct: 242 LAEEEIREMFEGMIRNVFRNAAGIDLPV--FPTMTYGDAMFKYGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEV-WAIPAKG--GGGNRAFCDRMNEWARSQGQPGLAYIF 360
           E     EF+VFS   ++  G  V   +P  G  GG +R   D   E+ +  G  GLAYI 
Sbjct: 300 ELMKRVEFKVFSNAATMQGGRVVALRVPGGGAEGGLSRGEIDAYQEFVKIYGAKGLAYIK 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA---- 416
                +G      P+ K+L+  +   I  R   ++GD  FF A D  K  + A  A    
Sbjct: 360 VNDAAAGREGLQSPIVKNLDDASLAEIIARTGARNGDILFFGA-DKEKIVNDAIGALRVK 418

Query: 417 --RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
              +   ++ G+ + + +   W++DFP +E++EE ++    H+PFT P+ G E L     
Sbjct: 419 IGHSAFGKKSGLFD-DRWAPLWVVDFPMFEFDEEGQRWSAVHHPFTAPKDGHEDLMDTAP 477

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               A  YD+V NG E+  G +R H  EV  + F  + IS E  + +FG L  A Q G P
Sbjct: 478 EKCIAKAYDMVLNGIEMGGGSVRIHREEVQSKVFRALKISAEDAQLKFGFLLDALQYGAP 537

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--V 592
           PHGGIA G+DR+VML+ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+  V
Sbjct: 538 PHGGIAIGLDRLVMLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLRNV 597

Query: 593 ENP 595
           + P
Sbjct: 598 QQP 600


>gi|326803472|ref|YP_004321290.1| aspartate--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651322|gb|AEA01505.1| aspartate--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 589

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/594 (39%), Positives = 352/594 (59%), Gaps = 16/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           RT+ CG +    +G  V L GWV R R  GG+IF+D+RD  G  QVV N  +    F  A
Sbjct: 3   RTNYCGLVSNEMIGQEVTLKGWVQRRRDLGGVIFVDMRDREGFVQVVFNEANLGDHFNRA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +RSE+V+ + G V++R+   IN  I  G IE+ A  + IL+ A+  P PV    +  E
Sbjct: 63  EKLRSEYVIEVQGQVVARAEGEINPKIKNGDIEVMASDLTILNRAKTPPFPVEDTIDVNE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R +YR++DLRR  +  NI  R+++ +++R  +  + F++  TP L+ S+PEGARD+LV
Sbjct: 123 DKRMQYRYIDLRRQRMQDNIRLRSQVTHAIRSFLDQDGFLDIETPYLSKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ  KQLLMASGFDRY+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 183 PSRVHPGEFYALPQSPQLLKQLLMASGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDLETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++I + +EN+L+ V ++   G  ++ +F  I YD+A+ RYG+DKPD R  + + ++
Sbjct: 242 FLSQEEIRDIVENMLKAVMKQVK-GLDMTEDFPVISYDEAMSRYGSDKPDTRFGLELVDL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++     +F+VF+  +++  G  V  I  KG     +R   D +  + +  G  G+A+I 
Sbjct: 301 SDIVDQYDFKVFN--MAIENGGIVKGINIKGAADQYSRKDLDGLTPYTKPFGSKGIAWI- 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ E G     GP+ K       + +  R++ + GD   F A       +   + R   
Sbjct: 358 -KVTEDGLT---GPIGKFFK-EKPQPLMERMNAEAGDILVFSADQASVVNASLGEVRIKF 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479
            +EL +++ N F F W++D+P  E+N +EK+    H+PFTMP +  ++ L+ ++  S+ +
Sbjct: 413 GRELDLMDNNQFNFLWVVDWPLLEYNADEKRYTAMHHPFTMPNEEDLDRLE-SEPESVYS 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G IR H  EV L     +G S+E    +FG L  A   G PPHGG+
Sbjct: 472 QAYDIVLNGYEIGGGSIRIHQKEVQLAMLKALGFSEEKANQQFGFLLDALDYGFPPHGGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DR+VML+ G  N+REV  FP +    D+L  +PS VS +QL EL L + +
Sbjct: 532 AIGLDRLVMLIAGEDNIREVMAFPKNGRAVDVLTDAPSPVSDKQLDELNLEVTK 585


>gi|260578813|ref|ZP_05846720.1| aspartate--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603111|gb|EEW16381.1| aspartate--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 600

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 243/607 (40%), Positives = 342/607 (56%), Gaps = 31/607 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L   ++G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +S   E A  
Sbjct: 3   RTHLAGELRPDNIGDEVTLTGWVGRRRDHGGVIFIDLRDRSGVAQVVFR-ESEVAERAHD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121
           +RSE+ L + G+V +R   + N N+ +G IE++   +E+L+ A  LP  +       E  
Sbjct: 62  LRSEYCLKVTGVVEARPEGSENPNLASGGIEVNVSALEVLNEAAALPFQIDDPSSSGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR T    +  R+R+  + R  +   +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRKTQGDALRLRSRVNQAARGVLAEHDFTEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLRPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D+++  E +L  +++E   G  +S    R+ Y DA++ YG+DKPDLR  I +  
Sbjct: 241 SFVDQEDVISLAEEILVAIWKEI--GYEISTPIPRMTYADAMKYYGSDKPDLRFDIQITE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360
            T+ F ++ FRVF           V A+  +GG    R   D   EWA+ +G  GLAYI 
Sbjct: 299 CTDFFKNTTFRVFQNEY-------VGAVVMEGGADQPRRQLDAWQEWAKQRGAKGLAYIL 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G ++  GPVAK++       I   +  + GD  FF AG+     +    AR  I
Sbjct: 352 --VGEDGELS--GPVAKNITDEERAGIAEHVGAKPGDCIFFAAGETKPSRALLGAARGEI 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEK---KIDFAHNPFTMPQGGMESLKGNDLLSI 477
           A +LG+I    + F W++D P +E   +      +   H+ +T       S K   L + 
Sbjct: 408 ANKLGLIKEGDWAFTWVVDAPLFEPAADATASGDVALGHSAWTAVHHAFTSPKPEYLDNF 467

Query: 478 K-------AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
                   A+ YD+VCNG EI  G IR H  +V  + F  +GI++E    +FG L  AF 
Sbjct: 468 DENPGEALAYAYDIVCNGNEIGGGSIRIHQPDVQERVFKVMGITEEEAREKFGFLLDAFA 527

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P  +S  Q +E G+ 
Sbjct: 528 FGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPGEISAAQRKESGID 587

Query: 591 IVENPKK 597
               PKK
Sbjct: 588 F--KPKK 592


>gi|254976334|ref|ZP_05272806.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255093719|ref|ZP_05323197.1| putative aspartyl-tRNA synthetase [Clostridium difficile CIP
           107932]
 gi|255315471|ref|ZP_05357054.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518134|ref|ZP_05385810.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255651250|ref|ZP_05398152.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260684314|ref|YP_003215599.1| putative aspartyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260687973|ref|YP_003219107.1| putative aspartyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306521094|ref|ZP_07407441.1| aspartyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|260210477|emb|CBA64949.1| putative aspartyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260213990|emb|CBE06101.1| putative aspartyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 595

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 221/592 (37%), Positives = 344/592 (58%), Gaps = 16/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RTH CG+L   ++   V L GWV + R  GG++F+D+RD  G+ Q+V   + D   FE A
Sbjct: 9   RTHYCGELREKNINEEVVLMGWVQKKRNLGGLVFVDLRDTSGLCQIVFDTDVDKEAFEKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +E+V+ + G V  R ++  N N+ TG IE+ A ++ +L+ +E  P+ +  + +  E
Sbjct: 69  EKLGAEFVIAVKGKVCERQSK--NPNMPTGDIEIFATELRLLNKSETPPIYIKDDDDVSE 126

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLR+ ++ +N+  R +++N  R  +    F E  TP L A +PEGARD+LV
Sbjct: 127 ALRLKYRYLDLRKPSMQRNLKLRHKVMNITRNYLSNNRFCEIETPFLIAPTPEGARDYLV 186

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ YKQLLM SG DRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 187 PSRVNPGKFYALPQSPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 245

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQ+D+++ +E +L  +F+E  +   ++    ++ Y +A+ +YG+DKPD R    + ++
Sbjct: 246 FVEQEDVMSMIEGLLEAIFKEVLDVE-LALPLPKMTYAEAMSKYGSDKPDTRFGYELTDI 304

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           ++   +  F+VF+   +  PG  V  I  KG   +  R     + E A++    GLA++ 
Sbjct: 305 SDVVCNCGFKVFAD--ATQPGKSVRGINVKGKADDFTRKQISSLEEHAKTYRAKGLAWM- 361

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               + G      P+AK  N     AI  +++ + GD   F+A             R  +
Sbjct: 362 ----KVGQEGVTSPIAKFFNEEEMNAILTKMNAEVGDLLLFVADKNSIVFDALGQVRLEV 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
           A  L +++ N +   W+ +FP +E +EE       H+PFT P    ++ L+  D  S++A
Sbjct: 418 ANRLNLLDKNVYNLLWVTEFPVFEEDEETGTFSAMHHPFTSPMDEDLDKLEEGDKSSLRA 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R   S++  + F  +G ++E    +FG L  AF+ G PPH G+
Sbjct: 478 KAYDIVLNGYEIGGGSVRISNSDIQSRMFKALGFTEERANEKFGYLLEAFKYGTPPHAGL 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL G  N+REV  FP +QN    +  +P+    EQL EL +++
Sbjct: 538 AFGLDRLVMLLAGTDNIREVIAFPKNQNAVCPMTNAPTLAEDEQLEELSIKV 589


>gi|254282547|ref|ZP_04957515.1| aspartyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678750|gb|EED35099.1| aspartyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 596

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 242/598 (40%), Positives = 365/598 (61%), Gaps = 15/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG +  S +   + L GWV R R HGG+IFLD+RD  GI QVV +PD+   FE A 
Sbjct: 2   RTHYCGSIDESLIDQTITLCGWVDRRRDHGGVIFLDMRDREGIVQVVFDPDTEEHFERAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR E+VL I G V +RS ET+N  + TG IE+  + +EIL+ A   P  +       E 
Sbjct: 62  RVRPEYVLKITGRVRARSPETVNPAMATGAIEVLGKSLEILNEAVTPPFQLDAHTSVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR++DLRR  +  N++ R++I   +R  +  E F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKYRYMDLRRPEMQSNLIARSKITYGVRAFLEGEGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHPGEFFALPQSPQLFKQLLMVAGFDRYYQIARCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +E+ D+++  E +++ +F++   G T+  +F  + + +A+ RYG+DKPDLR  + + +++
Sbjct: 241 LEERDVMDITERMVKSLFQDHL-GVTLP-DFPHMSWHEAMDRYGSDKPDLRIDLELVSIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG   +R   D   ++    G  GLA++   
Sbjct: 299 DLMQEVDFKVFSGP-AKDPEGRVAALCVPGGATLSRKDIDGYTKFVSIYGARGLAWVKVN 357

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
            D +  V+G+  P+ K +     E +  RL   DGD  FF A D  +  + A  A R  +
Sbjct: 358 -DRAAGVSGLQSPILKFMPDAVVEQLLERLGAADGDIIFFGA-DKARVVNEALGALRIKV 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++LG ++ + ++  W++DFP +E N+ +  +   H+PFT P   +E+LK  D  +  + 
Sbjct: 416 AEDLGRVS-DDWKPLWVVDFPMFE-NDADGDLTPLHHPFTAPACDVETLKA-DPANALSR 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQA-FSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
            YD+V NG EI  G IR H  +VM QA F  +GI  E  E +FG L  A Q G PPHGG+
Sbjct: 473 AYDMVLNGSEIGGGSIRIH-DQVMQQAVFDLLGIGPEEAEEKFGFLLSALQYGAPPHGGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR++ L++G  ++R+V  FP +Q+   ++  +P  VS  QL+EL +R+  + KK
Sbjct: 532 AFGLDRLITLMVGGHSIRDVIAFPKTQSAHCVMTDAPGEVSPAQLKELNIRLRGSDKK 589


>gi|154149426|ref|YP_001405899.1| aspartyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|166225334|sp|A7I058|SYD_CAMHC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|153805435|gb|ABS52442.1| aspartyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 584

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/597 (39%), Positives = 339/597 (56%), Gaps = 18/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R++ C +L   D+G  V + GWV+  R HGG+IF+D+RD  G+ Q+V +P  +   + IA
Sbjct: 2   RSNYCTELDSGDIGKIVDVCGWVNSYRDHGGVIFIDLRDRSGLIQLVCDPKHSQEAYTIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR E+VL   G + +R  + IN  + TG+IE+  + + + + ++ LP  V G++   E
Sbjct: 62  NSVRDEFVLRAHGKIRARGKDLINPKLKTGEIEVVVENLIVENPSKPLPF-VIGDKNVSE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLDLR +        R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ETRLKYRFLDLRTNENFNKFFTRSKAAIAARNALDRLGFVEVETPILTRATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLM S FD+YFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVYNGQFYALPQSPQLFKQLLMCSCFDKYFQIARCFRDEDLRADRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +Q D++   E VL+ +F+  S G  +   F  + Y DA+  YG+DKPDLR  +   +V
Sbjct: 240 FCDQKDVMKVGEAVLKDIFK--SCGKDIKTPFRVMQYKDAMENYGSDKPDLRFGMKFIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        V AI  +GG    ++    R  E+ R  G  GLA+I 
Sbjct: 298 ADIFEKSSNEIFANIAKDKKKNRVKAIKVEGGDLKFSKRQMQRFEEYVRKFGAQGLAFI- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ E G     GP+ K       + +  R +++ GD  FF AG       +    R  +
Sbjct: 357 -QVKEEGL---KGPLVKFFEKSEIDELVKRCELKVGDVVFFGAGKKKIVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +IN +  EF W++DFP +E N E+      H+PFTMP    E     D+  I + 
Sbjct: 413 ANELELINPDALEFLWVVDFPMFEQN-EDGTYSAMHHPFTMPNNVDEP----DIEEITSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  ++  + F  + I       +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGIELGGGSIRIHKEDIQEKVFKLLKIEPAEQREKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G DR++ML+  + ++R+V  FP +Q    LL  +PS +S EQLRELGL+I +  +K
Sbjct: 528 IGFDRLMMLVTRSSSIRDVIAFPKTQRAQCLLTKAPSGISNEQLRELGLKINKKEQK 584


>gi|116490654|ref|YP_810198.1| aspartyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|290890068|ref|ZP_06553151.1| hypothetical protein AWRIB429_0541 [Oenococcus oeni AWRIB429]
 gi|116091379|gb|ABJ56533.1| aspartyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|290480259|gb|EFD88900.1| hypothetical protein AWRIB429_0541 [Oenococcus oeni AWRIB429]
          Length = 591

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/597 (39%), Positives = 350/597 (58%), Gaps = 15/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
           + RT   G +     G  + L GWV + R  GG+IF+D+RD  GI Q+  + + +    +
Sbjct: 4   KQRTVYAGLVNEKMAGQAITLKGWVQKRRDLGGLIFVDLRDREGIVQLTFSDEFSKDALK 63

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ I G+V  R+   IN  + TG++E+   + EIL+ ++  P  +    + 
Sbjct: 64  TAERIRSEYVISITGVVSLRAESAINPKMKTGKVEVLVHQAEILAESKTPPFDIEDGVDV 123

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E ++ KYR+LDLRR  + K ++ R++I++S    M    F++  TP L  S+PEGARD+
Sbjct: 124 NEELKLKYRYLDLRRPEMQKGLILRSKIMSSSMRFMEENGFLDIETPYLAKSTPEGARDY 183

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+  GSFYALPQ+PQ +KQLLM +GFDRYFQIA CFRDED R DR P EF QLDME
Sbjct: 184 LVPSRIYPGSFYALPQSPQLFKQLLMGAGFDRYFQIARCFRDEDLRGDRQP-EFTQLDME 242

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ Q +I+  +   +  +  +    N  SN+F  + + +A+ R+G+DKPDLR  I +H
Sbjct: 243 TSFMNQGEIMELVNRWITQIMSDVVKANIDSNSFPVLHWQEAMDRFGSDKPDLRFGIELH 302

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +V+E    + F VF+   ++  G  V AI A  G     R   D   ++ +  G  GLA+
Sbjct: 303 DVSEIMKQTNFTVFTG--AIKKGGFVKAIVAPKGATKFTRKMIDGQTDYIKRFGAKGLAW 360

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +   E+G  +  GP+AK ++ V  + +   L + DGD  FF A             R 
Sbjct: 361 IKF---ENGEFS--GPIAKFVSDVKGQLVSF-LSLSDGDLVFFAADTFSVVSDTLGYLRK 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL-KGNDLLS 476
           ++A+EL +I+ + ++F WI+D+P +E++E+  +   AH+PFTMP +  +  L  G D   
Sbjct: 415 YVAKELDLIDESKWDFAWIVDWPLFEYSEDFGRWIAAHHPFTMPNEEDLHYLDDGEDPHL 474

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YDLV NG+E+ SG IR H  ++  +    +G + +  E  FG L  A + G PP 
Sbjct: 475 AHAQSYDLVLNGYELGSGSIRIHTMDIQKKMLKALGFTSDQAEKAFGFLLEAMEYGFPPM 534

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GGIA G+DR+ MLL G +N+REV  FP + N  + +  +PS VS +QL ELGLR+ E
Sbjct: 535 GGIALGLDRLAMLLSGKENIREVIAFPKNSNATEPMTKAPSRVSEKQLAELGLRVPE 591


>gi|34558088|ref|NP_907903.1| aspartyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|46577163|sp|Q7M8A6|SYD_WOLSU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|34483806|emb|CAE10803.1| ASPARTYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 587

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/598 (39%), Positives = 349/598 (58%), Gaps = 19/598 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--C 58
           M+  RTH C  LG  ++G  V L GW +  R HGG+IF+D+RD  GI Q+V++PD +   
Sbjct: 1   MYVLRTHLCTQLGEGNIGEEVILCGWCNTYRDHGGVIFIDLRDKSGIIQLVSDPDDSPKA 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E A+ VR E+VL   G V +R     N  + TG+IE+  +++ I + +   P+ + G+ 
Sbjct: 61  HENARVVRDEFVLIAKGKVRARGTGLENPKLATGKIEVILEELIIENRSLTPPITI-GDE 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R KYRFLDLR    +     R++   + R  +    F+E  TPILT ++PEGAR
Sbjct: 120 SVGEDLRLKYRFLDLRNPKAYDTFRLRSKAAIAARNSLDGMGFLEVETPILTKATPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV+ G F+ALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D
Sbjct: 180 DYLVPSRVHPGEFFALPQSPQLFKQLLMISGFDRYFQIAKCFRDEDLRADRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSF +Q+D++   E +L  +F   + G+T+  +F  + YD A+  YG+DKPDLR  + 
Sbjct: 239 VEMSFCDQEDVMGVAEKLLGDIFS--ACGHTIPEHFPHLTYDRAMEEYGSDKPDLRFEMP 296

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGL 356
           +  V + F  S   +F+KI   +      A+  KGG     R     + E+ +  G  GL
Sbjct: 297 LVEVIDLFGDSNNEIFAKIAQDSKKNRFKALKVKGGDLFFTRKTLGVLEEFVKKFGAAGL 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AYI  ++ E G     GP+ K ++  +   +  RL+ + GD  FF AG+      +    
Sbjct: 357 AYI--QVKEEGL---KGPLVKFMSERSLSLLLERLNPEVGDIIFFGAGEKKSVWDYMGRL 411

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +A+++G+I+ N   F W+++FP +E  ++E K+   H+PFTMP+    +L   D+  
Sbjct: 412 RLEVAKQMGLIDPNQLCFLWVVNFPMFE--KDEGKVKALHHPFTMPK----NLDCEDVEE 465

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I +  YD+V NG E+  G IR H   +  + F  +GI+ E  + +F  L  A + G PPH
Sbjct: 466 ISSIAYDVVLNGVELGGGSIRIHQEAIQKRVFDLLGIAPEEAQEKFDFLLEALKFGAPPH 525

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           GG A G DR++MLL  + ++R+V  FP +Q     L  +PS VS EQL+EL +RI E 
Sbjct: 526 GGFAIGFDRLIMLLTQSPSIRDVIAFPKTQKATCPLTSAPSPVSSEQLKELHIRIKEK 583


>gi|15596160|ref|NP_249654.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|107100420|ref|ZP_01364338.1| hypothetical protein PaerPA_01001445 [Pseudomonas aeruginosa PACS2]
 gi|116048888|ref|YP_792311.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893066|ref|YP_002441935.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|254245246|ref|ZP_04938568.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|12230941|sp|Q51422|SYD_PSEAE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|122257995|sp|Q02IC5|SYD_PSEAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226736543|sp|B7UXW9|SYD_PSEA8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|9946870|gb|AAG04352.1|AE004530_5 aspartyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|115584109|gb|ABJ10124.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126198624|gb|EAZ62687.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|218773294|emb|CAW29106.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 591

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/594 (39%), Positives = 340/594 (57%), Gaps = 9/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLD+RD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDVRDREGLAQVVFDPDRAETFAKAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R     N N+ +G IE+   ++E+L+ AE  P P+    +  E 
Sbjct: 63  RVRSEFVVKITGKVRLRPEGARNPNMASGSIEVLGYELEVLNQAETPPFPLDEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  +   +  R RI +S+R  +    F++  TPIL   +PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAAKLKLRARITSSIRRYLDDNGFLDVETPILGRPTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR   G F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTYPGHFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI+   E ++R +F+E    +   + F  + +++A+RRYG+DKPDLR P+ + +V 
Sbjct: 242 LDESDIIGITEKMVRQLFKEVL--DVEFDEFPHMPFEEAMRRYGSDKPDLRIPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   G     R+  D   ++    G  GLAYI   
Sbjct: 300 DQLKEVEFKVFSGPAN-DPKGRVAALRVPGAASMPRSQIDDYTKFVGIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K +   N   I  R+   DGD  FF A      C      R  +  
Sbjct: 359 ERAKGVEGLQSPIVKFIPEANLNVILDRVGAVDGDIVFFGADKAKIVCDALGALRIKVGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L ++    +   W++DFP +E N ++  +   H+PFT P+     L+ N   ++ +  Y
Sbjct: 419 DLKLLTRE-WAPMWVVDFPMFEEN-DDGSLSALHHPFTSPKCTPAELEANPGAAL-SRAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H   +    F  +GI +   E +FG L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTELGGGSIRIHDKSMQQAVFRVLGIDEAEQEEKFGFLLDALKYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR+VML+ GA ++REV  FP +Q+  D++  +P +V  + LREL +R+ E PK
Sbjct: 536 LDRLVMLMTGASSIREVIAFPKTQSAGDVMTQAPGSVDGKALRELHIRLREQPK 589


>gi|16803559|ref|NP_465044.1| aspartyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47097016|ref|ZP_00234589.1| aspartyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|224501541|ref|ZP_03669848.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254829722|ref|ZP_05234377.1| aspartyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|254898315|ref|ZP_05258239.1| aspartyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912193|ref|ZP_05262205.1| aspartyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936521|ref|ZP_05268218.1| aspartyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284801909|ref|YP_003413774.1| aspartyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995051|ref|YP_003416819.1| aspartyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|24212409|sp|Q8Y709|SYD_LISMO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|16410948|emb|CAC99597.1| aspartyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47014598|gb|EAL05558.1| aspartyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258609115|gb|EEW21723.1| aspartyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284057471|gb|ADB68412.1| aspartyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060518|gb|ADB71457.1| aspartyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|293590166|gb|EFF98500.1| aspartyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 591

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/594 (39%), Positives = 342/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I    E++L  V +E  N  T+   F R+ Y +A+ R+G+DKPD+R  + + NV
Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++     +F+VF    ++  G EV AI AK      +R   D +  +  + G  GLA   
Sbjct: 302 SDVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E+G +   GP+AK         ++V L  +DGD   F A       +     RN +
Sbjct: 357 WLKVEAGELK--GPIAKFFPEDKAAELKVALQAEDGDLLLFAADKADIVAASLGALRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L +IN     F W+ D+P +E++EE ++   AH+PFT+P+     L   D   + A 
Sbjct: 415 GKDLNLINEEELAFLWVTDWPLFEYDEEAERYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA
Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+ 
Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKK 588


>gi|313667849|ref|YP_004048133.1| aspartyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313005311|emb|CBN86744.1| aspartyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 602

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 237/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLGITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRIGLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKAKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|254931454|ref|ZP_05264813.1| aspartyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293583006|gb|EFF95038.1| aspartyl-tRNA synthetase [Listeria monocytogenes HPB2262]
          Length = 591

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/594 (39%), Positives = 341/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL++++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNMSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I    E++L  V +E  N  T+   F R+ Y +A+ R+G+DKPD+R  + + NV
Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++     +F+VF    ++  G EV AI AK      +R   D +  +  + G  GLA   
Sbjct: 302 SDVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E+G +   GP+AK         ++  L  +DGD   F A       +     RN +
Sbjct: 357 WLKVEAGELK--GPIAKFFPEEKATELKASLQAEDGDLLLFAADKADIVAASLGALRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A 
Sbjct: 415 GKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA
Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+ 
Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKK 588


>gi|296113406|ref|YP_003627344.1| aspartyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921100|gb|ADG61451.1| aspartyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 612

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/603 (38%), Positives = 356/603 (59%), Gaps = 20/603 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +   + ++GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 17  RSTYCGQVTEELIDQTITIAGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 76

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
           + RSE++L I G V  R   T N N+++GQ+EL  ++IE+L+ ++  P P+  +     E
Sbjct: 77  AARSEYLLKITGRVRRRYEGTENPNMVSGQVELLGKEIELLAKSDTPPFPLNDDNITVSE 136

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLD+RR  + + +  R +  +++R  +    F++  TP+LT ++PEGARD+LV
Sbjct: 137 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLV 196

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  QG+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 197 PSRTRQGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 255

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I++  E + + +F+     +   + F R+ Y DA+R Y +DKPDLR P+ + +V
Sbjct: 256 FLSDEEIMDITEGLTKNLFKTML--DVEFDTFPRMTYADAMRDYASDKPDLRIPLKLIDV 313

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +   H EF+VFS       G  V      GG  +R   D   ++    G  GLAYI  +
Sbjct: 314 ADIMQHVEFKVFSGPAQDPKGRVVALRIPNGGNMSRKQIDEYTKFVGIYGARGLAYI--K 371

Query: 363 LDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           ++++ N+       +G+  P+ K++       +  R D Q GD  FF   D  K  + A 
Sbjct: 372 VNDASNINNGVEKESGLQSPIIKNMTDEVLIELIERTDAQTGDIIFF-GADKAKIVNDAM 430

Query: 415 DA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            A R  I  +L +  C  +   W++DFP +E  ++ K     H+PFT P+G +E LK + 
Sbjct: 431 GALRVKIGTDLNLFTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTRPKGSVEELKQSP 488

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             ++ +  YD+V NG EI  G +R +  ++    F  +GISKE  E +F  L  A + G 
Sbjct: 489 ETAL-SIAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKEEAELKFKFLMDALRFGA 547

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V   QLRELG+RI E
Sbjct: 548 PPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTEAPAEVDNRQLRELGIRIRE 607

Query: 594 NPK 596
             K
Sbjct: 608 KQK 610


>gi|269123829|ref|YP_003306406.1| aspartyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268315155|gb|ACZ01529.1| aspartyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 587

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/604 (38%), Positives = 361/604 (59%), Gaps = 23/604 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EI 61
           YR+H   +L + +V   V L+GW+ +VR  G   F+D+RD YGITQ++ N +S     E+
Sbjct: 2   YRSHKLNELRIENVNENVILAGWIDKVRDLGHFAFIDLRDRYGITQILINENSPSNLQEL 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K +++E+V+ + G V+ RS++  N NI TG IE+ A ++ ILS +++LP  +  E    
Sbjct: 62  VKKLKNEFVIQVKGKVVERSSK--NPNIETGDIEVLAGELTILSHSKQLPFEL-SETNVN 118

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R  YR+LD+RR  + +NI KR  ++ S+R  M  E F++  TPIL  ++PEGARDF+
Sbjct: 119 ENLRLTYRYLDIRRRKMLENIKKRNDMLFSIREFMNKEGFLDIDTPILGKATPEGARDFI 178

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV +G FYALPQ+PQ +KQ LM +G D+Y+QIA CFRDED R+DR P EF QLD+EM
Sbjct: 179 VPSRVQKGEFYALPQSPQLFKQTLMVAGIDKYYQIAKCFRDEDLRADRQP-EFTQLDLEM 237

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DILN +E + + VF + + G      F RI YD A+  YG+DKPDLR  + + +
Sbjct: 238 SFIHQEDILNLVERLAKKVFIDVT-GEVEDKPFERISYDYAMNNYGSDKPDLRFDMKIQD 296

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ-PGLAYIF 360
           ++       F VF    +++ G  V AI ++    +R     + ++ +   +  GLAYI 
Sbjct: 297 ISNIVNGKGFSVFDD--AISNGGSVRAIVSEDKDFSRKRIKDLEDFVKVYYKAKGLAYI- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +  E G+++   P++K  +     ++  RLD+++ +  F +A             R  +
Sbjct: 354 -KKLEDGSIS--SPISKFFDEETINSLIQRLDLKNNEIVFILADKNKAVLDGLGALRLKL 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLSIKA 479
            +ELG+I+ + F+F W++DFP +E++EEE +   AH+PFT + +  ++ L   +   I +
Sbjct: 411 GEELGLIDKDKFKFVWVLDFPMFEYSEEEGRYQAAHHPFTSIKKDHIKYLDTKEYDKILS 470

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+EI  G IR H S +  + F  +G+SKE   ++FG        G+PPHGG+
Sbjct: 471 ESYDLVLNGYEIGGGSIRIHDSSLQSKVFDELGLSKEEQLDKFGFFLETLSYGVPPHGGL 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           A G+DR +M +L   +++EV  FP +    DLL G+P+ V   QL        EN  K+ 
Sbjct: 531 AFGLDRWLMAMLKENSIKEVIPFPKTNKGQDLLTGAPADVDYNQL--------ENDLKLK 582

Query: 600 KISV 603
           KI +
Sbjct: 583 KICI 586


>gi|325132854|gb|EGC55533.1| aspartyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325138834|gb|EGC61385.1| aspartyl-tRNA synthetase [Neisseria meningitidis ES14902]
 gi|325203570|gb|ADY99023.1| aspartyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 602

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 237/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGTQNGDIIFFGA-DKTKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|218259683|ref|ZP_03475326.1| hypothetical protein PRABACTJOHN_00985 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224954|gb|EEC97604.1| hypothetical protein PRABACTJOHN_00985 [Parabacteroides johnsonii
           DSM 18315]
          Length = 585

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/592 (39%), Positives = 344/592 (58%), Gaps = 16/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT +CGDL ++D G  + L+GWV + R  GG+ F+DIRD YGITQ+V N   D+A  E 
Sbjct: 2   YRTRTCGDLRLADEGLVITLAGWVQKTRKMGGMTFVDIRDRYGITQLVFNQEVDAALCEK 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  RS++  N NI TG+IE+    + IL+ A   P  +  + +  
Sbjct: 62  ANKLGREYVIQVTGTVRERSSK--NPNIPTGEIEIIVSNLNILNAAVTPPFTIEDDTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR+ + KN+  R R+   +R  +  + F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRNAVRKNLELRHRMAFEVRNYLDKQGFLEVETPVLVNSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D+LN  E + + +F+    G  +   F RI + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQEDVLNIFEGMAKHLFKVI-RGVDIKEAFPRISWHDAMKYYGSDKPDLRFDMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y V  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-VGGICAEGAASYTRKQLDALTEFVKRPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  GNV     V K       + ++     + GD    ++G D +K      + R  
Sbjct: 352 ARVEADGNVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A +LG+ + N F   W++DFP +EW+EE+++    H+PFT P+     L  +D  +++A
Sbjct: 410 VAGQLGLRDKNKFACLWVIDFPLFEWSEEDQRFYAMHHPFTSPKPEDIPLLDSDTGAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++  + F  +G ++E  + RFG L  AF+ G PPHGG+
Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSKLQDKMFQLLGFTEEKAQERFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR V L  G  ++R+   FP + +  D+++ +P  +   QL EL L++
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGQLDDSQLEELCLKV 581


>gi|254824422|ref|ZP_05229423.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|255521238|ref|ZP_05388475.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|293593657|gb|EFG01418.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|328474880|gb|EGF45680.1| aspartyl-tRNA synthetase [Listeria monocytogenes 220]
 gi|332311961|gb|EGJ25056.1| Aspartyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 591

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/594 (39%), Positives = 340/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I    E++L  V +E  N  T+   F R+ Y +A+ R+G+DKPD+R  + + NV
Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++     +F+VF    ++  G EV AI AK      +R   D +  +  + G  GLA   
Sbjct: 302 SDVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E+G +   GP+AK         ++  L  +DGD   F A       +     RN +
Sbjct: 357 WLKVEAGELK--GPIAKFFPEEKATELKASLQAEDGDLLLFAADKADIVAASLGALRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A 
Sbjct: 415 GKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA
Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+ 
Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKK 588


>gi|30689804|ref|NP_195102.2| tRNA synthetase class II (D, K and N) family protein [Arabidopsis
           thaliana]
 gi|332660874|gb|AEE86274.1| aspartyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 664

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 239/598 (39%), Positives = 346/598 (57%), Gaps = 22/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG+L V+DVG  V L GWV   R HGG+ FL++RDH GI QV   PD       + 
Sbjct: 75  RTELCGELSVNDVGKRVHLCGWVALHRVHGGLTFLNLRDHTGIVQVRTLPDEFPEAHGLI 134

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGERE-- 119
             +R E+V+ ++G V SR  E++N  + TG +E+ A+ +EIL+ V  +LP  V    E  
Sbjct: 135 NDMRLEYVVLVEGTVRSRPNESVNKKMKTGFVEVVAEHVEILNPVRTKLPFLVTTADENK 194

Query: 120 --YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPE 175
               E IR ++R LDLRR  +  NIV R  ++  +R R + +   FIE  TPIL+ S+PE
Sbjct: 195 DLIKEEIRLRFRCLDLRRQQMKNNIVLRHNVVKLIR-RYLEDRHGFIEIETPILSRSTPE 253

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARD+LVPSR+  G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF 
Sbjct: 254 GARDYLVPSRIQSGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFT 312

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           QLDMEM+F+  +D+L   E+++R VF E   G  + + F R+ Y DA+ RYG+D+PD R 
Sbjct: 313 QLDMEMAFMPMEDMLKLNEDLIRKVFSEI-KGIQLPDPFPRLTYADAMDRYGSDRPDTRF 371

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP---AKGGGGNRAFCDRMNEWARSQG 352
            + + +V+  F  S FRVF++ L      +V  +P    K         D  NE  +S G
Sbjct: 372 DLELKDVSNVFTESSFRVFTEALESGGIIKVLCVPLGAKKYSNSALKKGDIYNEAMKS-G 430

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
             GL   F ++ ++G + G+  +   L+         +     GD   F  G        
Sbjct: 431 AKGLP--FLKVLDNGEIEGIAALVSSLDSAGKINFVKQCGAAPGDLILFGVGPVTSVNKT 488

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               R  +A ++ +I+ +     W+ DFP +EWNE E++++  H+PFT P+   E +  +
Sbjct: 489 LDRLRLFVAHDMDLIDHSKHSILWVTDFPMFEWNEPEQRLEALHHPFTAPKP--EDM--D 544

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DL S +A  YD+V NG EI  G +R +  +V  +    +GIS E  E++FG L  A   G
Sbjct: 545 DLPSARALAYDMVYNGVEIGGGSLRIYKRDVQEKVLEIIGISPEEAESKFGYLLEALDMG 604

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            PPHGGIA G+DR+VM+L GA ++R+V  FP +      L  +PS V  +QL++L +R
Sbjct: 605 APPHGGIAYGLDRMVMMLGGASSIRDVIAFPKTTTAQCALTRTPSEVDPKQLQDLSIR 662


>gi|68536118|ref|YP_250823.1| aspartyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|97196643|sp|Q4JVF2|SYD_CORJK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|68263717|emb|CAI37205.1| aspS [Corynebacterium jeikeium K411]
          Length = 600

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 243/607 (40%), Positives = 342/607 (56%), Gaps = 31/607 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L   ++G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +S   E A  
Sbjct: 3   RTHLAGELRPDNIGDEVTLTGWVGRRRDHGGVIFIDLRDRSGVAQVVFR-ESEVAERAHD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121
           +RSE+ L + G+V +R   + N N+ +G IE++   +E+L+ A  LP  +       E  
Sbjct: 62  LRSEYCLKVTGVVEARPEGSENPNLASGGIEVNVSALEVLNEAAALPFQIDDPSTSGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR T    +  R+R+  + R  +   +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRKTQGDALRLRSRVNQAARGVLAEHDFTEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLRPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D+++  E +L  +++E   G  +S    R+ Y DA++ YG+DKPDLR  I +  
Sbjct: 241 SFVDQEDVISLAEEILVAIWKEI--GYEISTPIPRMTYADAMKYYGSDKPDLRFDIQITE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360
            T+ F ++ FRVF           V A+  +GG    R   D   EWA+ +G  GLAYI 
Sbjct: 299 CTDFFKNTTFRVFQNEY-------VGAVVMEGGADQPRRQLDAWQEWAKQRGAKGLAYIL 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G ++  GPVAK++       I   +  + GD  FF AG+     +    AR  I
Sbjct: 352 --VGEDGELS--GPVAKNITDEERAGIAEHVGAKPGDCIFFAAGETKPSRALLGAARGEI 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEK---KIDFAHNPFTMPQGGMESLKGNDLLSI 477
           A +LG+I    + F W++D P +E   +      +   H+ +T       S K   L + 
Sbjct: 408 ANKLGLIKEGDWAFTWVVDAPLFEPAADATASGDVALGHSAWTAVHHAFTSPKPEYLDNF 467

Query: 478 K-------AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
                   A+ YD+VCNG EI  G IR H  +V  + F  +GI++E    +FG L  AF 
Sbjct: 468 DENPGEALAYAYDIVCNGNEIGGGSIRIHQPDVQERVFKVMGITEEEAREKFGFLLDAFA 527

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P  +S  Q +E G+ 
Sbjct: 528 FGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPGEISAAQRKESGID 587

Query: 591 IVENPKK 597
               PKK
Sbjct: 588 F--KPKK 592


>gi|326570106|gb|EGE20151.1| aspartyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 598

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/603 (38%), Positives = 356/603 (59%), Gaps = 20/603 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +   + ++GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RSTYCGQVTEELIDQTITIAGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
           + RSE++L I G V  R   T N N+++GQ+EL  ++IE+L+ ++  P P+  +     E
Sbjct: 63  AARSEYLLKITGRVRRRYEGTENPNMVSGQVELLGKEIELLAKSDTPPFPLNDDNITVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLD+RR  + + +  R +  +++R  +    F++  TP+LT ++PEGARD+LV
Sbjct: 123 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  QG+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRTRQGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I++  E + + +F+     +   + F R+ Y DA+R Y +DKPDLR P+ + +V
Sbjct: 242 FLSDEEIMDITEGLTKNLFKTML--DVEFDTFPRMTYADAMRDYASDKPDLRIPLKLIDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +   H EF+VFS       G  V      GG  +R   D   ++    G  GLAYI  +
Sbjct: 300 ADIMQHVEFKVFSGPAQDPKGRVVALRIPNGGEMSRKQIDEYTKFVGIYGARGLAYI--K 357

Query: 363 LDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           ++++ N+       +G+  P+ K++       +  R D Q GD  FF   D  K  + A 
Sbjct: 358 VNDASNINNGVEKESGLQSPIIKNMTDEVLIELIERTDAQTGDIIFF-GADKAKIVNDAM 416

Query: 415 DA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            A R  I  +L +  C  +   W++DFP +E  ++ K     H+PFT P+G +E LK + 
Sbjct: 417 GALRVKIGTDLNLFTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTRPKGSVEELKQSP 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             ++ +  YD+V NG EI  G +R +  ++    F  +GISKE  E +F  L  A + G 
Sbjct: 475 ETAL-SIAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKEEAELKFKFLMDALRFGA 533

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V   QLRELG+RI E
Sbjct: 534 PPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTEAPAEVDNRQLRELGIRIRE 593

Query: 594 NPK 596
             K
Sbjct: 594 KQK 596


>gi|114321812|ref|YP_743495.1| aspartyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122310755|sp|Q0A582|SYD_ALHEH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|114228206|gb|ABI58005.1| aspartyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 592

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/593 (38%), Positives = 350/593 (59%), Gaps = 9/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG +  +D+   V L GW HR R HGG+IF+D+RD  G+ QVV +PD    F +A+
Sbjct: 2   RTHYCGHVSETDLDQEVTLCGWAHRRRDHGGVIFIDLRDREGLVQVVFDPDRPETFALAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL + G V  R A T N ++ TGQ+E+   ++++L+ A+  P  +    +  E 
Sbjct: 62  RVRSEFVLKVRGRVRRRPAGTENPDLPTGQVEVLGLELDLLNPAKTPPFQLDEHEQAGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR++DLRR  + + +  R RI +++R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 122 VRLRYRYVDLRRPEMLQRLRARARITSNLRRFLDEHGFLDIETPMLTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +G DRY+QI  CFRDED R+DR P EF QLD+E SF
Sbjct: 182 SRTHPGSFFALPQSPQLFKQLLMMAGMDRYYQIVRCFRDEDLRADRQP-EFTQLDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ I++  E ++R +F +    + + + F R+ Y +A+ R+G+DKPDLR P+ +  V 
Sbjct: 241 MDEEGIMHLTERMMRRLFADVLQVD-LPDPFPRMGYAEAMARFGSDKPDLRIPLELVEVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF+   + +P   V A+   GG G  R   D   ++    G  GLAYI   
Sbjct: 300 DLMGGVEFKVFAGP-AADPRGRVAALHVPGGAGLTRKQIDDYTQFVGRYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K L     + I  R + + GD  FF A D  K  + A  A R  + 
Sbjct: 359 DPAQGREGLQSPILKFLTDEAVDGILRRTEARAGDLIFFGA-DKAKVVNDALGALRVKLG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAF 480
            +L ++  + +   W++DFP +E++E++ ++   H+PFT P       L   D   + + 
Sbjct: 418 HDLAMVE-DEWRPLWVVDFPMFEYDEKDGRLYALHHPFTAPNVDDPAELADKDPEQLVSR 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H  ++    F  +GI ++    +FG L  A + G PPHGGIA
Sbjct: 477 AYDMVLNGTELGGGSVRIHRQDMQQAVFRLLGIDEDEARAKFGFLLDALEYGAPPHGGIA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR+VML+ GA ++REV  FP +Q    LL  +P+ V + QL+EL LRI +
Sbjct: 537 FGLDRLVMLMTGASSIREVMAFPKTQTAACLLTDAPAEVDIAQLQELALRITK 589


>gi|296315098|ref|ZP_06865039.1| aspartate--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296838009|gb|EFH21947.1| aspartate--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 602

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 237/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPAMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|327183446|gb|AEA31893.1| aspartyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 617

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/602 (37%), Positives = 346/602 (57%), Gaps = 15/602 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +G  V L GWV RVR  G ++F+D+RD  G+ Q+V N DS     +IA
Sbjct: 7   RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKELMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E+VL + G V+ RS   +N ++ TGQ+E+ A +I IL+ A+  P  +    +  E
Sbjct: 67  DSLGNEYVLQVKGKVVKRS--EVNPDMKTGQVEVDATEIIILNKAKNPPFEIKNGVDISE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +++ I    E +L+ + ++   G  +     RI + DA+ +YG+DKPD R  +++H++
Sbjct: 244 FADEETIQGYTEGLLKKIMKDV-KGIDLKTPIKRITWTDAMNKYGSDKPDTRYGMLIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS   ++  G  V  I  K G    +R   D+  ++ +     GLA++ 
Sbjct: 303 SSIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKEYSRKKLDKKADFIKRFHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +  DE       GPVA+ L   N EA++   D++ G+   F+A      C      R   
Sbjct: 361 YEDDEFS-----GPVARFLTDDNKEALKKEFDLEGGELVVFVADKWKVICDSLNHLRREF 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+E GII    ++F W++D+P +E++E   +   AH+PFTMP      L   +     A 
Sbjct: 416 AKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHKAHAR 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H   +    F  +G +K+    +FG L  A   G PPH G+A
Sbjct: 476 SYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGLA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DR  M+L    N+R+V  FP + +  + +M +P+ V+ +QL +LG+ + +  +  +K
Sbjct: 536 IGLDRFAMMLANKDNIRDVLAFPKNASASEPMMHAPAPVADQQLADLGIEVEDKYQDSVK 595

Query: 601 IS 602
            +
Sbjct: 596 AT 597


>gi|319778843|ref|YP_004129756.1| Aspartyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317108867|gb|ADU91613.1| Aspartyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 598

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/599 (39%), Positives = 351/599 (58%), Gaps = 15/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT   G +    +   V L GW HR R HGG+IFLD+RD  G+ Q+V +PD+   F+IA+
Sbjct: 3   RTCYVGKVNTEYLNKTVTLYGWCHRRRDHGGVIFLDLRDREGLAQIVFDPDNEEAFKIAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + GLV +R   TIN ++ +G+IE+  +++EIL+ +   P  +  E    E+
Sbjct: 63  TIRNEYCVRVTGLVRNRPEGTINKDLYSGEIEVLCKEVEILNPSVTPPFQLDDE-NLSET 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR  +R +DLRR  +  N++ R R+    R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 122 IRLTHRIIDLRRPVMQNNMMLRYRVAIESRKFLDELGFIDIETPMLTRSTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQ+LM +G+DRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 182 SRVHDGQFYALPQSPQLFKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+    G  +++ F  + +D+A+ R+G+DKPD+R  +    +T
Sbjct: 241 LNEKEIRDIFEAMMRHVFKAV-KGIELADPFPVMTWDEAMGRFGSDKPDMRISLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           E     +F+VF    ++  G  V A+   GGG  +R   D   ++    G  GLAYI   
Sbjct: 300 ELMKSVDFKVFQSAANMVGG-RVVALRVPGGGALSRKEIDEYTQFVGIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR----- 417
               G      P+ K+++      I  R   QDGD  FF A D  K  + A  A      
Sbjct: 359 SVAQGREGLQSPIVKNIDDATLSEIITRSGAQDGDLLFFGA-DKAKIVNDAMGALRVKLG 417

Query: 418 -NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +  A+E G      ++  W++DFP +E++EEE +   AH+PFT P+ G E L  +D   
Sbjct: 418 LSDFAKEHGFFEAG-WKPLWVVDFPMFEYDEEEGRYTAAHHPFTSPKDGHEDLLESDPSK 476

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+E+  G +R H  EV  + F  + I  +    +FG L  A Q G PPH
Sbjct: 477 AYAKAYDMVLNGWEVGGGSVRIHKEEVQSKVFRALKIGPDEAREKFGFLLDALQYGAPPH 536

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A G+DR+V L+ GA+++R+V  FP +Q   DLL+ +PS V  +QLREL +R+  NP
Sbjct: 537 GGLAFGLDRLVTLMAGAESIRDVIAFPKTQRAQDLLVQAPSEVDEKQLRELHIRL-RNP 594


>gi|227542198|ref|ZP_03972247.1| aspartyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227182027|gb|EEI62999.1| aspartyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 610

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 245/607 (40%), Positives = 343/607 (56%), Gaps = 31/607 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L   + G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +S   E A  
Sbjct: 11  RTHLAGELRKENAGDTVTLTGWVARRRDHGGVIFIDLRDRSGLAQVVFR-ESEVAEQAHH 69

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121
           +RSE+ + + G+V +R   + N N+ +G IE++  ++EIL+ +  LP  +       E  
Sbjct: 70  LRSEFCIKVTGVVEARPEGSSNPNLPSGDIEVNVSELEILNESAALPFQIDDPSSSGEVG 129

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR+     +  R++   + R  +   +F E  TP LT S+PEGARDFL
Sbjct: 130 EETRLKYRYLDLRRERQADALRLRSKANRAARTVLDKHDFTEIETPTLTRSTPEGARDFL 189

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G++YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 190 VPARLKPGTWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 248

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E +L  ++     G  +     R+ Y +A+ +YG+DKPDLR  I +  
Sbjct: 249 SFVDQDDVIVLAEEILTALWGLI--GYEIKTPIPRMTYKEAMEKYGSDKPDLRFDIQIVE 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360
            TE F  + FRVF      NP   V A+   GG    R   D   +WA+ +G  GLAYI 
Sbjct: 307 CTEFFKDTTFRVFQ-----NP--YVGAVVMDGGASQPRRQLDAWQDWAKQRGAKGLAYIL 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G ++  GPVAK++  V  E I   +  + GD  FF AGD     +    AR  I
Sbjct: 360 --VGEDGTLS--GPVAKNITDVEREGIAAHVGAKPGDCIFFAAGDAKSSRALLGAARGEI 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLK 470
           A +LG+I    + F W++D P +E + +     D A         H+ FT P+       
Sbjct: 416 ANKLGLIKEGDWAFTWVVDAPLFEPSADATASGDVALGHSSWTAVHHAFTSPKPESMDTF 475

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  S  A+ YD+VCNG EI  G IR H  +V  + F  +GI++E    +FG L  AF 
Sbjct: 476 DTDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAREKFGFLLDAFA 535

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ ++ EQ +E G+ 
Sbjct: 536 FGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGIDPLTDAPAAITPEQRKEAGID 595

Query: 591 IVENPKK 597
               PKK
Sbjct: 596 F--KPKK 600


>gi|119504256|ref|ZP_01626336.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119459764|gb|EAW40859.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 592

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/590 (39%), Positives = 349/590 (59%), Gaps = 11/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG +  SD+ + V L GWV R R HGG+IFLD+RD  GI QVV +PD+ + F +A 
Sbjct: 2   RTHYCGLVSESDIDNTVTLYGWVDRRRDHGGVIFLDMRDREGIVQVVFDPDTESAFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+VL I G V +R   TIN  + TG IE+  ++IE+LS +   P P+       E 
Sbjct: 62  RVRTEYVLKITGRVRARGEGTINPAMATGSIEILGKEIELLSESATPPFPLDAHHSVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R++DLRR  +  N++ R R+ +S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKFRYMDLRRPEMQNNLMFRARLTSSIRQYLDGHGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHEGEFFALPQSPQLFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +E+ DI+   E ++R VF E  N +    +F  + + +A+ RYG+DKPDLR  + + ++ 
Sbjct: 241 LEESDIMTLTEGLVRSVFTEHLNVDL--GDFPHMTWHEAMERYGSDKPDLRIKLELVSID 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS       G  V A+   GG   +R   D         G  GLA+I   
Sbjct: 299 DLMAGVEFKVFSGPAQDASG-RVAALKVDGGAKLSRKEIDDYTRHVSVYGARGLAWIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K +     + +  RL+ +DGD  FF A D  K  + A  A R  +A
Sbjct: 358 NLAQGLEGLQSPILKFMPEEVVQQLMDRLEAKDGDIIFFGA-DSRKVVNEALGALRLKVA 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++LG++    +   W++DFP +E N    ++   H+PFT P     +L+ +   ++ +  
Sbjct: 417 EDLGLVEAG-WAPLWVVDFPMFEEN-GNGELTPLHHPFTAPACEEAALRDSPSEAL-SRA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  ++    F  +GI  +    +FG L  A Q G PPHGG+A 
Sbjct: 474 YDMVLNGSELGGGSIRIHRPDMQQAVFDVLGIDSDEAAEKFGFLLDALQYGAPPHGGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+V L++G +++R+V  FP +Q+   ++  +P  VS  QLREL +++
Sbjct: 534 GLDRLVTLMVGGQSIRDVIAFPKTQSASCVMTEAPGRVSDAQLRELSIKL 583


>gi|15618572|ref|NP_224858.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15836194|ref|NP_300718.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752378|ref|NP_444637.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33242019|ref|NP_876960.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|6919974|sp|Q9Z7P2|SYD_CHLPN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|4376961|gb|AAD18801.1| Aspartyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189021|gb|AAF37971.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8979034|dbj|BAA98869.1| aspartyl tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|33236529|gb|AAP98617.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 584

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/594 (39%), Positives = 343/594 (57%), Gaps = 16/594 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
           +YRTH C +L  + +G  V+L+GWVHR R HGG++F+D+RD +GITQ+V   D      +
Sbjct: 2   KYRTHRCNELTSNHIGENVQLAGWVHRYRNHGGVVFIDLRDRFGITQIVCREDEQPELHQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
              +VRSEWVL + G V  R A   N N+ TG IE+     E+LS ++ LP  +  +   
Sbjct: 62  RLDAVRSEWVLSVRGKVCPRLAGMENPNLATGHIEVEVASFEVLSKSQNLPFSIADDHIN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LD+RR  + + ++ R +++ + R  M A+ F E  TP+L  S+PEGARD
Sbjct: 122 VNEELRLEYRYLDMRRGDIIEKLLCRHQVMLACRNFMDAQGFTEIVTPVLGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  G FYALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D+
Sbjct: 182 YLVPSRIYPGKFYALPQSPQLFKQLLMVGGLDRYFQIATCFRDEDLRADRQP-EFAQIDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF +  D+L  +E ++  +F   + G  +     ++ Y +A   YGTDKPDLR  + +
Sbjct: 241 EMSFGDTQDLLPIIEQLVATLFA--TQGIEIPLPLAKMTYQEAKDSYGTDKPDLRFDLKL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +  ++   S F +F   L+     + + +P  G   +R   D   E+ +  G  GL   
Sbjct: 299 KDCRDYAKRSSFSIFLDQLAHGGTIKGFCVPG-GATMSRKQLDGYTEFVKRYGAMGLV-- 355

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARN 418
            W  ++ G VA    +AK ++      +    D +D D    IA  P    + + D  R 
Sbjct: 356 -WIKNQEGKVASN--IAKFMDEEVFHELFAYFDAKDQDILLLIAA-PESVANQSLDHLRR 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+E  + + N + F WI DFP +    E+ KI   H+PFT P      L   D L+++
Sbjct: 412 LIAKERELYSDNQYNFVWITDFPLFSL--EDGKIVAEHHPFTAPLEEDIPLLETDPLAVR 469

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG+EIASG  R H  ++  Q F+ + IS E ++ +FG   +A   G PPH G
Sbjct: 470 SSSYDLVLNGYEIASGSQRIHNPDLQSQIFTILKISPESIQEKFGFFIKALSFGTPPHLG 529

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IA G+DR+VM+L  A+++REV  FP +Q   DL+M +PS +   QL+EL +++ 
Sbjct: 530 IALGLDRLVMVLTAAESIREVIAFPKTQKASDLMMNAPSEIMSSQLKELSIKVA 583


>gi|296272666|ref|YP_003655297.1| aspartyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096840|gb|ADG92790.1| aspartyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 583

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 234/593 (39%), Positives = 343/593 (57%), Gaps = 23/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH C ++  S +G  V ++GWV+  R HGGIIF+D+RD  G+ Q+VA+P       E A
Sbjct: 2   RTHYCTEVTESLIGQEVTVAGWVNSRRDHGGIIFIDLRDKGGLVQLVADPADCKDALETA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR E+VL   G V +R     N N++TG+IE+    + I + ++ +P  + G+ +  E
Sbjct: 62  EKVRDEFVLIATGKVRARGEGLENPNLVTGKIEIVLSNLIIENRSKPMPFDL-GDEKVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR + RFL+LR    +     R+    ++R  +    F++  TPILT S+PEGARD+LV
Sbjct: 121 EIRLRNRFLELRTKKSYDIFKLRSTANIAIRNCLNEMEFLDVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHPGEFYALPQSPQIFKQLLMVSGFDKYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+D++   E ++   F   + G  V   F R+ Y++A+ +YG+DKPDLR  + + +V
Sbjct: 240 FCTQEDVIKVAEKLIHDTFT--ACGKDVPETFPRMTYNEAMEQYGSDKPDLRFDMPLVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGLAY 358
            + F  S   +F+ I        + AI  K   G+  F  R      ++ R  G  GL Y
Sbjct: 298 IDIFARSSNEIFASIAKDKAHNRIKAI--KCPNGDNIFSKRQMKAFEDYVRKFGAQGLGY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
             +++ E G     GP+ K     + E I    +++ GD  FF AG       +    R 
Sbjct: 356 --FQMKEDGL---KGPLTKFFTEADLEEIVKVTELEVGDVVFFGAGHKKIVWDYMGRFRL 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           H+A ++ I+  + F+F W++DFP +E   E+ ++   H+PFTMP+     L  ++L  I+
Sbjct: 411 HLADQMEIVPADTFKFLWVVDFPMFEV--EDGRVKALHHPFTMPK----DLNKDNLEEIE 464

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H   +  + FS +GIS E    +FG L  A Q G PPHGG
Sbjct: 465 SIAYDIVLNGTELGGGSIRIHKENIQKEVFSLMGISDEDAREKFGFLLDALQFGAPPHGG 524

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            A G+DR++MLL G  ++R+V  FP +Q    L+  +PS V  EQL+EL LRI
Sbjct: 525 FALGLDRMIMLLAGTDSIRDVIAFPKTQRAQCLMTNAPSPVDEEQLKELSLRI 577


>gi|58337236|ref|YP_193821.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227903820|ref|ZP_04021625.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|81311475|sp|Q5FKI4|SYD_LACAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|58254553|gb|AAV42790.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227868707|gb|EEJ76128.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 614

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/591 (38%), Positives = 342/591 (57%), Gaps = 15/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +G  V L GWV RVR  G ++F+D+RD  G+ Q+V N DS     EIA
Sbjct: 4   RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKDLMEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E+V+ + G V+ RS    N ++ TGQ+E+ A +I IL+ A+  P  +    E  E
Sbjct: 64  NSLGNEYVIQVRGKVVKRS--EANPDMKTGQVEVDATEIIILNEAKNPPFEIKDGVEISE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  + K I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 122 QTRLKYRYLDLRRPEVQKAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS
Sbjct: 182 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F ++  I +  E +L+ + ++   G  +     R+ + D++ +YG DKPD R  +++H++
Sbjct: 241 FADEQTIQDYTEGLLKKIMKDVM-GIDLKTPIKRMSWTDSMNKYGCDKPDTRYGMLIHDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS   ++  G  V  I  K G    +R   D+  ++ +     GLA++ 
Sbjct: 300 SSIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKEYSRKKIDKKADFIKRFHAKGLAWVK 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E G  +  GPVA+ L   N EA++   D++ G+   F+A      C      R   
Sbjct: 358 F---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFVADKWKVVCDSLDHLRREF 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+E GII    ++F W++D+P +E++E   +   AH+PFTMP      L   D     A 
Sbjct: 413 AKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTDPHKAHAR 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H   +    F  +G +K+    +FG L  AF  G PPH G+A
Sbjct: 473 SYDIVMNGDEMGGGSIRIHKRSIQEDMFKALGFTKKRAYEQFGYLMDAFDMGFPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR  M+L G  N+R+V  FP + +  + +M +P+ V+ +QL +LG+ +
Sbjct: 533 IGLDRFAMMLAGKDNIRDVLAFPKNASASEPMMHAPAPVADQQLADLGIEV 583


>gi|15827171|ref|NP_301434.1| aspartyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221229649|ref|YP_002503065.1| aspartyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|549025|sp|P36429|SYD_MYCLE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Antigen T5;
           AltName: Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781743|sp|B8ZUJ3|SYD_MYCLB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3335328|gb|AAC27132.1|S82268_1 aspartyl-tRNA synthetase [Mycobacterium leprae]
 gi|581332|emb|CAA54735.1| aspartyl-tRNA synthetase [Mycobacterium leprae]
 gi|3136016|emb|CAA19094.1| aspartyl-tRNA synthetase [Mycobacterium leprae]
 gi|13092719|emb|CAC30009.1| aspartyl-tRNA synthetase [Mycobacterium leprae]
 gi|219932756|emb|CAR70594.1| aspartyl-tRNA synthetase [Mycobacterium leprae Br4923]
          Length = 589

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 239/606 (39%), Positives = 339/606 (55%), Gaps = 32/606 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63
           R+H  G L  SD G  V L+GWV R R HGG+IF+D+RD  GITQ V   PD      A 
Sbjct: 3   RSHGAGVLRKSDAGQQVTLAGWVSRRRDHGGVIFIDLRDSSGITQAVFREPD--VLAQAH 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V  R     NA I TG IE++A  + +L   E  PLP   +    E 
Sbjct: 61  RLRAEFCIAVSGVVEIRPEGNANAEIPTGDIEVNATSLTVL--GESAPLPFQLDEPAGEE 118

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRRD     I  R+++  + R  +   +F+E  TP +T S+PEGARDFLVP
Sbjct: 119 LRLKYRYLDLRRDGPGSAIRLRSKVNATARAVLARHDFVEIETPTITRSTPEGARDFLVP 178

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R+  G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSF
Sbjct: 179 ARLRPGTFYALPQSPQLFKQLLMVAGMERYYQIAHCYRDEDFRADRQP-EFTQLDMEMSF 237

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+ +D++   E +L  ++     G  +     RI Y DA+RR+G+DKPDLR  + +   T
Sbjct: 238 VDAEDVIAISEEILTELW--MLIGYHIPAPIPRISYADAMRRFGSDKPDLRFGLELVECT 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWR 362
           E F  + FRVF           V A+   GG    R   D   +WA+ +G  GLAY+   
Sbjct: 296 EFFCDTTFRVFQAPY-------VGAVVMPGGAAQPRRTLDEWQDWAKQRGHRGLAYVL-- 346

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + + G +   GPVAK+ +      +   +  + GD  FF AG      +    AR  IA 
Sbjct: 347 VTDDGTLG--GPVAKNFSDAERSRLASHVGAEPGDCIFFSAGPAKSSRALLGAARGEIAN 404

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKI----------DFAHNPFTMPQGGMESLKGN 472
            LG+I+   + F W++D P +E  +E  K+             H+ FT P+   E    +
Sbjct: 405 RLGLIDPEAWAFVWVVDPPLFERADEATKVGEMAVGSGAWTAVHHAFTSPKPEFEDSIES 464

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D  S+ A  YD+VCNG EI SG +R +  ++  + F+ +G+ K   E +FG L  AF  G
Sbjct: 465 DPGSVLADAYDIVCNGHEIGSGSVRINRRDIQERVFAVMGLEKAEAEEKFGFLLEAFTFG 524

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G DR   LL G +++REV  FP +    D L  +P++++ +Q +E G  I 
Sbjct: 525 APPHGGIAFGWDRTNALLAGMESIREVIAFPKTGGGVDPLTDAPASITAQQRKESG--ID 582

Query: 593 ENPKKI 598
             PK++
Sbjct: 583 TKPKEV 588


>gi|225016791|ref|ZP_03705983.1| hypothetical protein CLOSTMETH_00703 [Clostridium methylpentosum
           DSM 5476]
 gi|224950459|gb|EEG31668.1| hypothetical protein CLOSTMETH_00703 [Clostridium methylpentosum
           DSM 5476]
          Length = 593

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/597 (39%), Positives = 348/597 (58%), Gaps = 21/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62
           RTH C D+ +  VG  V ++G+V + R  G + FLD+RD  GI Q+  +   D   F+ A
Sbjct: 10  RTHYCNDVRMDCVGQTVVVAGFVQKRRDLGNLAFLDLRDRTGIVQLAFDDASDRTVFDKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            + R+E+VL   G V  R  E+ N ++ TG IE+    + +LS AE  P  +       E
Sbjct: 70  TTCRAEFVLMAKGTVRER--ESKNPDLPTGDIEIFVDDLRVLSEAEVPPFEITDNTNVNE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + +++  R +I  + R       FIE  TPIL  SSPEGARD+LV
Sbjct: 128 ELRLKYRYLDLRRGEMQQSLFMRHKITKAARDYYDENGFIEIETPILIKSSPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G F+ALPQ+PQQYKQL M +GFDRY QIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 188 PSRVHPGKFFALPQSPQQYKQLTMLAGFDRYMQIARCFRDEDLRADRQP-EFTQIDLEMS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ DD++   E  ++ VF++  + + V     RI Y++A+ R+G+DKPD R  + + ++
Sbjct: 247 FVDVDDVIEVNEGFVQYVFKKILDVD-VQLPLRRIRYEEAMNRFGSDKPDTRFGLELTDL 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++   ++EF+VF+  L       V AI  KGG    +R   D++ E+ ++    GLAY  
Sbjct: 306 SDLLRNTEFKVFAGALETG---SVRAINVKGGADKLSRKEIDKLVEFVKTYKAKGLAYTR 362

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP---LKFCSFAADAR 417
           W  D++ +        K L+     A+R R++ + GD    +A DP   + F S  A  R
Sbjct: 363 WTADKATS-----SFEKFLSEEEVTALRARMNAEPGDVILVVA-DPSNAVVFDSLGA-LR 415

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            H+A +LG+I  N ++  W+ DFP +E++EEE +    H+PFT           +D +  
Sbjct: 416 CHLADKLGLIEDNSYDLLWVTDFPLFEYDEEEGRYAAKHHPFTAVADEDADKLLSDPVHC 475

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YDL+ NG E+  G IR +  E+  + F  +G ++E  + +FG L  AF+ G PPHG
Sbjct: 476 HAKAYDLILNGCELGGGSIRINDPEMQSKMFKALGFTEEQAQEQFGFLINAFKYGAPPHG 535

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G+DR+VML+LG  ++R+V  FP  QN  +L+   P+ V  +QL EL +  VE 
Sbjct: 536 GMAYGLDRLVMLMLGKPSIRDVIAFPKVQNASELMTQCPAEVDPKQLEELFIETVEK 592


>gi|121635393|ref|YP_975638.1| aspartyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|166225367|sp|A1KVG2|SYD_NEIMF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|120867099|emb|CAM10865.1| aspartyl-tRNA synthetase [Neisseria meningitidis FAM18]
          Length = 602

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   ++GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAENGDIIFFGA-DKAKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|148652798|ref|YP_001279891.1| aspartyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|254781745|sp|A5WE50|SYD_PSYWF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148571882|gb|ABQ93941.1| aspartyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 601

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/604 (38%), Positives = 363/604 (60%), Gaps = 22/604 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +  + +   + ++GW+HR R HGG+IFLD+RD  GI QVV +PD+   F  A 
Sbjct: 3   RTEYCGAVTEALLEQTITITGWIHRRRDHGGVIFLDMRDRAGILQVVVDPDTPEAFVTAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
           + RSE+VL I G V  R   T NAN+ +G +EL A++I +L+ +E  P P+  E     E
Sbjct: 63  AARSEYVLKITGRVRKRYEGTENANMTSGNVELLAKEIVVLAKSETPPFPLNDENISVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LD+RR  + + +V R +  +++R  +  + F++  TPILT ++PEGARD+LV
Sbjct: 123 DLRLKYRYLDMRRPEMQERMVFRAKATSTIRRYLDDQGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRTRPGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ ++DI++  E +++ +F+   + +     F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLSEEDIMDINEGLIQNLFKTMLDVDL--GKFPRMTYAEAMRDYASDKPDLRIPLKLIDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     +F+VF+   + +P   V A+    GG   R   D   ++    G  GLAYI  
Sbjct: 300 ADLMQSVDFKVFAGPAN-DPKGRVAALRVPNGGSLTRKQIDEYTKYVGIYGARGLAYI-- 356

Query: 362 RLDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
           +++++ N+       +G+  P+ K+++     ++  R   QDGD  FF   D  K  + A
Sbjct: 357 KVNDASNINNGVDKESGLQSPIIKNMSDEVLVSLIERTGAQDGDIIFF-GADKAKIVNDA 415

Query: 414 ADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
             A R  I  ++ +  C  +   W++DFP +E  ++ K     H+PFTMP+G +E LK +
Sbjct: 416 MGALRVKIGLDMNMETCE-WAPLWVVDFPMFEETDDGKWTSM-HHPFTMPKGSVEELKNS 473

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
              ++ +  YD+V NG EI  G +R +  E+    F  +GIS+E    +F  L  A + G
Sbjct: 474 PETAL-SIAYDMVLNGTEIGGGSLRINTVEMQRAVFDALGISEEEANEKFSFLLDALKFG 532

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V   QLRELG+R+ 
Sbjct: 533 APPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTQAPAEVDSRQLRELGIRVR 592

Query: 593 ENPK 596
           E  +
Sbjct: 593 EKAQ 596


>gi|78780166|ref|YP_398278.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|97196790|sp|Q317V3|SYD_PROM9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78713665|gb|ABB50842.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 598

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/605 (38%), Positives = 356/605 (58%), Gaps = 28/605 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R   C +L  +D+G  V L GWV R R HGG+IF+D+RDH G  Q+  NPD     F+ A
Sbjct: 2   RNKICDELNNTDIGKLVNLCGWVDRRRDHGGVIFIDLRDHSGFLQITINPDDGANLFKQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119
           +++R+E V+ + G++  R  ++IN N+ TG++EL  + ++IL+ +   LP PV       
Sbjct: 62  ETLRNETVIMVSGIINERPKDSINKNLSTGKLELKVKDLQILNQIKNNLPFPVSIHDYEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLRR  L KN+  R +II   R  +    F E  TP+LT S+PEGARD
Sbjct: 122 TKEELRLKYRYLDLRRGKLLKNLKTRHKIIKVAREFLDNFGFTEVETPLLTKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FL+PSR++ G F+ALPQ+PQ +KQLLM  G D+Y+QIA CFRDED R+DR P EF QLD+
Sbjct: 182 FLIPSRLSNGEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ +++I++  E++++ +++E  N N   N F R+ +  A+  YGTD+PD R  +++
Sbjct: 241 EMSFISEEEIISFNESLIKKIWKEVLNIN-FDNAFPRMKWQAAMDNYGTDRPDTRYQMLL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-----DRMNEWARSQGQP 354
            ++ E      F +F+K  ++  G  + +I  KGG  + +         + + A+  G  
Sbjct: 300 KDLGEVLGDIGFNIFTK--AIKSGGSIKSITVKGGNSSISNVRIKPGGDIFQVAQDAGAG 357

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GLA+I  + DE   +  +G +  +L+  +   I    + +DGD     AGD         
Sbjct: 358 GLAFIRVKGDE---LETIGAIKNNLSEEHISDILRITEAEDGDLILLGAGDKQIVNQSLD 414

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R +IA++L +I+ + + F W+ DFP +E NEEE + +  H+PF  P+    ++K  D 
Sbjct: 415 RVRQYIAKDLNLIDTSKWNFLWVTDFPLFERNEEENRYEALHHPFCSPK----NIKSKDS 470

Query: 475 LSIK-------AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
            ++K       A  YDLV NG E+  G +R H + +  +    VG++ + ++ +FG L  
Sbjct: 471 ENLKKAIENSIANAYDLVLNGLELGGGSLRIHEANLQREVLKTVGLTDKEIDEKFGFLIE 530

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           A + G PPHGGIA G+DRI ML++GA ++RE   FP +Q    LL  +PS VS  QL+EL
Sbjct: 531 ALEMGAPPHGGIAFGLDRITMLIIGADSIRETIAFPKNQQAKCLLTNAPSNVSESQLKEL 590

Query: 588 GLRIV 592
            + I 
Sbjct: 591 DIEIT 595


>gi|325136852|gb|EGC59450.1| aspartyl-tRNA synthetase [Neisseria meningitidis M0579]
 gi|325142900|gb|EGC65262.1| aspartyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325198852|gb|ADY94308.1| aspartyl-tRNA synthetase [Neisseria meningitidis G2136]
 gi|325205530|gb|ADZ00983.1| aspartyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 602

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 237/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|145295757|ref|YP_001138578.1| aspartyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|166225342|sp|A4QEL0|SYD_CORGB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|140845677|dbj|BAF54676.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 608

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 248/611 (40%), Positives = 340/611 (55%), Gaps = 39/611 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63
           RTH  G+L   + G  V L+GWV+R R HGG+IF+D+RD  GI QVV  N D A  E A 
Sbjct: 3   RTHLSGELRKENAGQSVTLTGWVNRRRDHGGVIFIDLRDRTGIAQVVFRNEDVA--ERAH 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER---EY 120
           ++RSE+VL + G+V  R   + N N+ +G IE+S  + E+L+ +  LP  +       E 
Sbjct: 61  ALRSEFVLRVTGVVEERPEGSQNPNLASGDIEVSVTEFEVLNESAPLPFQIEDSSSAGEV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR      +  R+    + R  + + +F E  TP LT S+PEGARDF
Sbjct: 121 GEETRLKYRYLDLRRPVQANALRLRSAANKAARTVLDSHDFTEIETPTLTRSTPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  G+FYALPQ+PQ +KQLL  +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 181 LVPARLRPGTFYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++   E ++  V++    G  +     R+ Y DA+RRYG+DKPDLR  I + 
Sbjct: 240 MSFVDQDDVIALGEEIISEVWKLI--GYEIKTPIPRMTYADAMRRYGSDKPDLRFDIEIT 297

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
             TE F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAYI
Sbjct: 298 ECTEFFQDTTFRVFKNEY-------VGAVVMTGGASQPRRQLDAWQEWAKQRGAKGLAYI 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              + E G ++  GPVAK++       I   +  Q GD  FF AGD     +    AR  
Sbjct: 351 L--VGEDGELS--GPVAKNITDAERAGIAAHVGAQPGDCIFFAAGDTKSSRALLGAARGE 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQ----GG 465
           IA++L +I    + F WI+D P +E   +            K    H+ FT P+      
Sbjct: 407 IAKKLDLIKEGDWAFTWIVDAPMFEPAADATASGDVALGNSKWTAVHHAFTSPKPEFLDN 466

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
            ++  G+ L    A+ YD+VCNG EI  G IR H  +V  + F  +GI+ E    +FG L
Sbjct: 467 FDTNPGDAL----AYAYDIVCNGNEIGGGSIRIHQRDVQERVFEVMGITGEEAREKFGFL 522

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             AF  G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ ++ +Q +
Sbjct: 523 LDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGIDPLTDAPAAITPQQRK 582

Query: 586 ELGLRIVENPK 596
           E G+     PK
Sbjct: 583 EAGIDAKPKPK 593


>gi|116327961|ref|YP_797681.1| aspartyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330842|ref|YP_800560.1| aspartyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120705|gb|ABJ78748.1| Aspartate--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124531|gb|ABJ75802.1| Aspartate--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 604

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 243/604 (40%), Positives = 339/604 (56%), Gaps = 22/604 (3%)

Query: 2   HRYRTHS-CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
             Y+  S  G+L  S VG  + L GW  R R  GG+IF+D+RD  GI QVVA  +     
Sbjct: 10  QNYKNRSWAGELNESQVGKKIFLYGWSFRFRDQGGVIFIDLRDRTGIIQVVARKELLGEE 69

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F IA+ VRSE+VL + G +  R AE++N  + TG IE+   K+EIL++A+  P  +    
Sbjct: 70  FLIAEKVRSEYVLAVSGTLKKRDAESVNLKMQTGTIEVVLDKLEILNIAKTPPFSLDEFD 129

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  E +R KYR+LD RR+ L   ++KR   I ++R  +    F+E  TPIL  S+PEGAR
Sbjct: 130 EVSEELRLKYRYLDFRREELKNRMIKRHEFIFAIRNYLSKRKFVEIETPILNKSTPEGAR 189

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR+N   FYALPQ+PQ +KQ+LM  G +RYFQI  CFRDED R+DR P EF QLD
Sbjct: 190 DFLVPSRLNPNQFYALPQSPQIFKQILMVGGMERYFQIVKCFRDEDLRADRQP-EFTQLD 248

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME SFV Q++IL+ +E ++  +++E  N   ++  F R+ Y  AI  YG+DKPDLR  + 
Sbjct: 249 MEFSFVNQEEILSEIEGLVSTIYKEVFNIQ-LTTPFPRMTYKTAIEEYGSDKPDLRFGMK 307

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWA-RSQGQPGL 356
           + +V+E     +F VFS   +V  G  V AI   GG   +R   +    W  R     GL
Sbjct: 308 LVDVSEIVKDCDFNVFSG--AVKSGGTVKAICVPGGSVVSRKEIEDYTAWLNRDYKAKGL 365

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+     + G+      + K       +AI      ++GD  FF A +           
Sbjct: 366 AYM-----KHGSEGLESTITKRFKKEELDAISKVCGSKEGDMLFFGADEKEIVNHSLGAL 420

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-------GMESL 469
           R  +++       N     WI+DFP +EWN++ K+ D  H+PFT P          ME+L
Sbjct: 421 RLKLSERFETPKQNEINITWIVDFPMFEWNKDHKRWDALHHPFTSPSDESIPFFESMETL 480

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
           + N   +  A  YDLV NG EI  G IR H  E+  Q F  +GI +E    +FG L  A 
Sbjct: 481 QKNASKAT-AKAYDLVMNGVEIGGGSIRIHSREIQNQVFRVLGIGEEEAREKFGFLLEAL 539

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGG+A GIDR++MLL   K++R+V  FP +Q    L+   PS V  +QL+EL +
Sbjct: 540 EFGAPPHGGLAFGIDRMLMLLTEGKSIRDVIAFPKTQRGLCLMSECPSPVEEKQLQELKI 599

Query: 590 RIVE 593
           ++V+
Sbjct: 600 KLVK 603


>gi|260903842|ref|ZP_05912164.1| aspartyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 594

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 242/602 (40%), Positives = 332/602 (55%), Gaps = 38/602 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H  G L  S  G  V LSGWV R R HGG+ F+D+RD  GI QVV   D A      +
Sbjct: 3   RSHETGSLRASHAGQTVTLSGWVDRRRDHGGVAFIDLRDASGIVQVVVREDDA-----HA 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----Y 120
           +R+E V+ + G V  R     NAN+ TG IE+   K+EILS AE LP  V    E     
Sbjct: 58  LRNESVVKVTGTVSLRPEGNTNANLPTGDIEVIDTKVEILSQAEALPFQVSDHAEDAGTV 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR+LDLRR      +  R+    + R  +  ++F+E  TP LT S+PEGARDF
Sbjct: 118 GEETRLRYRYLDLRRSGPAATMRLRSAANRAARNVLDEQDFLEIETPTLTRSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLL  +G +RY+Q+A C+RDED R+DR P EF QLD+E
Sbjct: 178 LVPARLQPGSWYALPQSPQLFKQLLQVAGMERYYQMARCYRDEDFRADRQP-EFTQLDIE 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SFVEQ+DI+   E +L  +++    G+ ++     I Y +A+ +YG+DKPDLR  + +H
Sbjct: 237 ASFVEQEDIIELAEKILVALWKLI--GHEITTPIPHITYAEAMEKYGSDKPDLRFELELH 294

Query: 301 NVTEHFVHSEFRVFSKIL---SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           N+T+ F  + FRVF        V PG         GG   R   D   +WA+ +G  GLA
Sbjct: 295 NLTDFFKDTPFRVFQSEYVGSVVYPG---------GGSLPRRQLDGWQDWAKQRGAKGLA 345

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+   + E G +   GPVAK+++      +        GD+ FF AGDP    S    AR
Sbjct: 346 YVL--VAEDGTL--TGPVAKNISEDEKAGLVEAAGANPGDAIFFAAGDPASSRSLLGAAR 401

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGME 467
           N IA+  G+I    + F W++D P +E              E      H+ FT P+    
Sbjct: 402 NEIAERTGLIKEGDWAFVWVVDAPLFESAAAAQAAGDVAVGEGSWTAVHHAFTAPKPEFL 461

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
               +D  +  A+ YD+VCNG EI  G IR H  +V  + F  +GIS+E  + +FG L  
Sbjct: 462 DTLESDPGAALAYAYDIVCNGNEIGGGSIRIHRKDVQERVFKIMGISEEDAQEKFGFLLE 521

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPHGGIA G DRIV LL G  ++REV  FP +    D L  +P+ ++  Q  E 
Sbjct: 522 AFKFGAPPHGGIAFGWDRIVSLLAGVDSIREVIAFPKTGAGYDPLTQAPAPITDAQRAEA 581

Query: 588 GL 589
           G+
Sbjct: 582 GV 583


>gi|325956620|ref|YP_004292032.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333185|gb|ADZ07093.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 605

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/602 (37%), Positives = 346/602 (57%), Gaps = 15/602 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +G  V L GWV RVR  G ++F+D+RD  G+ Q+V N DS     +IA
Sbjct: 7   RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKELMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E+VL + G V+ RS   +N ++ TGQ+E+ A +I IL+ A+  P  +    +  E
Sbjct: 67  DSLGNEYVLQVKGKVVKRS--EVNPDMKTGQVEVDATEIIILNKAKNPPFEIKNGVDISE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +++ I    E +L+ + ++   G  +     RI + DA+ +YG+DKPD R  +++H++
Sbjct: 244 FADEETIQGYTEGLLKKIMKDV-KGIDLKTPIKRITWTDAMNKYGSDKPDTRYGMLIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS   ++  G  V  I  K G    +R   D+  ++ +     GLA++ 
Sbjct: 303 SSIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKEYSRKKLDKKADFIKRFHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +  DE       GPVA+ L   N EA++   D++ G+   F+A      C      R   
Sbjct: 361 YEDDEFS-----GPVARFLTDDNKEALKKEFDLEGGELVVFVADKWKVICDSLNHLRREF 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+E GII    ++F W++D+P +E++E   +   AH+PFTMP      L   +     A 
Sbjct: 416 AKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHKAHAR 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H   +    F  +G +K+    +FG L  A   G PPH G+A
Sbjct: 476 SYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGLA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DR  M+L    N+R+V  FP + +  + +M +P+ V+ +QL +LG+ + +  +  +K
Sbjct: 536 IGLDRFAMMLANKDNIRDVLAFPKNASASEPMMHAPAPVADQQLADLGIEVEDKYQDSVK 595

Query: 601 IS 602
            +
Sbjct: 596 AT 597


>gi|208434537|ref|YP_002266203.1| aspartyl-tRNA synthetase [Helicobacter pylori G27]
 gi|238064669|sp|B5Z6Y8|SYD_HELPG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|208432466|gb|ACI27337.1| aspartyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 577

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 222/589 (37%), Positives = 343/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKSVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+    G+T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQAIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFKLPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+          +  I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECED----IEEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSHSIRDVIAFPKTQKASCLLTNAPSPINEEQLRELHIRL 575


>gi|161870607|ref|YP_001599780.1| aspartyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|189082106|sp|A9M257|SYD_NEIM0 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|161596160|gb|ABX73820.1| aspartyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 602

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 237/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPAMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|118617364|ref|YP_905696.1| aspartyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118569474|gb|ABL04225.1| aspartyl-tRNA synthetase AspS [Mycobacterium ulcerans Agy99]
          Length = 593

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 241/609 (39%), Positives = 342/609 (56%), Gaps = 30/609 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M   R+H+ G L  SD G  V L+GWV R R HGG+IF+D+RD  GI QVV   ++    
Sbjct: 1   MFVLRSHAAGALRDSDAGRQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFR-EADVLA 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +R+E+ + + G+V  R     N  I TG+IE++A  + +L   E  PLP   +   
Sbjct: 60  QAHRLRAEFCVAVTGVVEIRPEGNANPEIATGEIEVNASSLTVLG--ECAPLPFQLDEPA 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRRD     I  R+++  + R  +   +F+E  TP +T S+PEGARDF
Sbjct: 118 GEELRLKYRYLDLRRDGPASAIRLRSKVNAAARAVLAGHDFVEIETPTITRSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDME
Sbjct: 178 LVPARLHPGMFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDME 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ +DI+   E +L  ++     G  +     RI Y DA+RR+G+DKPDLR  + + 
Sbjct: 237 LSFVDVEDIIAVSEEILTALWALI--GYRIPTPTPRISYADAMRRFGSDKPDLRFGLELV 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
              E F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+
Sbjct: 295 ECAEFFKDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEWAKQRGHRGLAYV 347

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              + E G +   GPVAK+L     + +   +    GD  FF AG      +    AR  
Sbjct: 348 L--VGEDGTLG--GPVAKNLTDAERDGLAAHVGASPGDCIFFSAGPVRASRALLGAARIE 403

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESL 469
           IA+ L +I+ + +EF W++D P +E  E+     D A         H+ FT P+  +E  
Sbjct: 404 IAERLNLIDPSAWEFVWVVDPPLFEPAEDATASGDVAVGSGAWTAVHHAFTAPKPELEDR 463

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
             +D  S+ A  YD+VCNG EI  G IR H  ++  + F+ +G+SK   E +FG L  A 
Sbjct: 464 IESDPGSVLADAYDIVCNGHEIGGGSIRIHRRDIQERVFAVMGLSKAEAEEKFGFLLEAL 523

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
             G PPHGGIA G DR+  LL GA ++R+V  FP +    D L  +P+ ++ +Q +E G 
Sbjct: 524 TFGAPPHGGIAFGWDRVSTLLAGADSIRDVIAFPKTGGGVDPLTEAPAPITAQQRKEAG- 582

Query: 590 RIVENPKKI 598
            I   PK++
Sbjct: 583 -IDAKPKQV 590


>gi|188527535|ref|YP_001910222.1| aspartyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|238691926|sp|B2UTL0|SYD_HELPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|188143775|gb|ACD48192.1| aspartyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 577

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 222/589 (37%), Positives = 344/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+    G+ +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHNISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+    G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVCQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGV---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+    +++  DL  I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPK----NIECKDLEEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|237809454|ref|YP_002893894.1| aspartyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259511872|sp|C4LBN4|SYD_TOLAT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|237501715|gb|ACQ94308.1| aspartyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 588

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/590 (38%), Positives = 341/590 (57%), Gaps = 10/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +  S V   V L GWVHR R  GG+IF+D+RD  GI QV  +PD    F +A 
Sbjct: 2   RSIYCGQVTSSHVEQTVTLCGWVHRRRDLGGLIFIDMRDREGIVQVFFDPDKPEAFALAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    IN ++ TG++E+ A  +EI++ AE  PLP+   +   E 
Sbjct: 62  ELRNEFCIRVTGVVRARPDSQINKDMATGEVEIFAHGLEIINRAE--PLPLDFNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +  ++  R RI + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMAASLKTRARITSFVRRYMDEHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   MEN++RG+++     +     F  + +D+A+RRYG+DKPDLRNP+ M ++ 
Sbjct: 239 LNAEQVRELMENLIRGLWQNIIGVDL--GQFPIMTFDEAMRRYGSDKPDLRNPMEMVDIA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +      F VF+   + +P   V A+    G   +R   D   ++    G  GLA++   
Sbjct: 297 DLLKDVSFAVFAGPAN-DPKGRVAALRVPDGAQLSRKQIDEYTQFVSIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             +SG      PVAK LN      I  R   QDGD  FF A      C      R  +A+
Sbjct: 356 QADSGLAGVQSPVAKFLNDEIVREILSRTSAQDGDIIFFGADSKKVVCDAIGALRLKLAR 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L ++  NC++  W++DFP +E  + E  +   H+PFT P+    +    D L+  A  Y
Sbjct: 416 DLDLVE-NCWKPLWVVDFPMFE-EDGEGGVTAMHHPFTAPKDFTPAQLEADPLAAYANAY 473

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GIS+   + +FG L  A + G PPH G+A G
Sbjct: 474 DMVINGYEVGGGSVRIHRGDMQQTVFRAIGISEAEQKEKFGFLLDALKFGTPPHAGLAFG 533

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR+ MLL G  N+R+V  FP +     L+  +PS  + +QL EL ++  
Sbjct: 534 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANQQQLSELAIQTT 583


>gi|160936536|ref|ZP_02083903.1| hypothetical protein CLOBOL_01426 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440327|gb|EDP18072.1| hypothetical protein CLOBOL_01426 [Clostridium bolteae ATCC
           BAA-613]
          Length = 596

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/592 (39%), Positives = 350/592 (59%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           RTH C ++  + +G  V + GWV + R  GGIIF+D+RD  GI Q++   +   +  F  
Sbjct: 10  RTHRCTEVTTAHIGQEVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEENDCGAENFAK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ + G V +RS   +N N+ TG IE+ A  + ILS +E  P P+    +  
Sbjct: 70  AEKLRSEFVVAVTGRVEARSG-AVNTNLATGAIEIRANSMRILSESETPPFPIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYRFLDLRR  L KN++ R+++    R  + +E F+E  TP L  S+PEGARD+L
Sbjct: 129 EELRLKYRFLDLRRPDLQKNLMIRSQVATLTRAFLASEGFLEIETPTLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQ+A C+RDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQLARCYRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+L+  E +L+ +F+E   G  V     R+ + +A+ R+G+DKPDLR  + + N
Sbjct: 248 SFVDVDDVLDVNERLLKKLFKEIC-GFDVQLPIPRMTWQEAMDRFGSDKPDLRFGMELKN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V+E     EF VF   L    G  V  I A+G G   R   D + E+A+  G  GLAY+ 
Sbjct: 307 VSEVVKGCEFAVFKGAL--ENGGSVRGINAQGQGHMPRKKIDALVEYAKGFGARGLAYV- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G V      AK +      A+   +D + GD   F A           + R  +
Sbjct: 364 -AISEDGTVK--SSFAKFMKEEEMTALISAMDGKPGDLLLFAADRNKVVFDVLGNLRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L ++  + F+F W+ +FP  E++EEE +    H+PFTMP         +D   ++A 
Sbjct: 421 ARQLDLLKKDDFKFLWVTEFPLLEYSEEEDRYVAMHHPFTMPMDEDLQYIDSDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H +++  + F  +G + E    +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGVEMGGGSVRIHQADIQSKMFEVLGFTPERAGEQFGFLLEAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VML++GA ++R+V  FP  ++   L+  +P  V  +QL EL + + 
Sbjct: 541 YGLDRVVMLMVGADSIRDVIAFPKVKDASCLMTEAPGQVDEKQLEELHIAVA 592


>gi|326559889|gb|EGE10289.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 598

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/603 (38%), Positives = 356/603 (59%), Gaps = 20/603 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +   + ++GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RSTYCGQVTEELIDQTITIAGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
           + RSE++L I G V  R   T N N+++GQ+EL  ++IE+L+ ++  P P+  +     E
Sbjct: 63  AARSEYLLKITGRVRRRYEGTENPNMVSGQVELLGKEIELLAKSDTPPFPLNDDNITVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLD+RR  + + +  R +  +++R  +    F++  TP+LT ++PEGARD+LV
Sbjct: 123 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDYGFLDVETPVLTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  QG+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRTRQGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I++  E + + +F+     +   + F R+ Y DA+R Y +DKPDLR P+ + +V
Sbjct: 242 FLSDEEIMDITEGLTKNLFKTML--DVEFDTFPRMTYADAMRDYASDKPDLRIPLKLIDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +   H EF+VFS       G  V      GG  +R   D   ++    G  GLAYI  +
Sbjct: 300 ADIMQHVEFKVFSGPAQDPKGRVVALRIPNGGNMSRKQIDEYTKFVGIYGARGLAYI--K 357

Query: 363 LDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           ++++ N+       +G+  P+ K++       +  R D Q GD  FF   D  K  + A 
Sbjct: 358 VNDASNINNGVEKESGLQSPIIKNMTDEVLIELIERTDAQTGDIIFF-GADKAKIVNDAM 416

Query: 415 DA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            A R  I  +L +  C  +   W++DFP +E  ++ K     H+PFT P+G +E LK + 
Sbjct: 417 GALRVKIGTDLNLFTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTRPKGSVEELKQSP 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             ++ +  YD+V NG EI  G +R +  ++    F  +GISKE  E +F  L  A + G 
Sbjct: 475 ETAL-SIAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKEEAELKFKFLMDALRFGA 533

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V   QLRELG+RI E
Sbjct: 534 PPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTEAPAEVDNRQLRELGIRIRE 593

Query: 594 NPK 596
             K
Sbjct: 594 KQK 596


>gi|254852143|ref|ZP_05241491.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|300764814|ref|ZP_07074804.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|258605446|gb|EEW18054.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|300514490|gb|EFK41547.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
          Length = 591

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/594 (39%), Positives = 340/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGTVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I    E++L  V +E  N  T+   F R+ Y +A+ R+G+DKPD+R  + + NV
Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++     +F+VF    ++  G EV AI AK      +R   D +  +  + G  GLA   
Sbjct: 302 SDVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E+G +   GP+AK         ++  L  +DGD   F A       +     RN +
Sbjct: 357 WLKVEAGELK--GPIAKFFPEEKATELKASLQAEDGDLLLFAADKADIVAASLGALRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A 
Sbjct: 415 GKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA
Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+ 
Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKK 588


>gi|312149409|gb|ADQ29480.1| aspartyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 586

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 350/592 (59%), Gaps = 12/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+ N +    +IA+
Sbjct: 2   FKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLIN-EEKLLKIAE 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + I GL++ R    IN N+ TG  E+ A+ IEI+S   ELP  +  +    E+
Sbjct: 61  KIKLEYCIKIQGLLIKRPPNMINTNMKTGHFEILAKNIEIISKCNELPFMIEDDNNASEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + +YR+LDLRRD+L   I+ R +  + +R  +I   F+E  TP    S+PEGARDF++P
Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++++I   +EN+L  +F+   N N +   F +I Y  A+ +YG+DKPD R  + + +++
Sbjct: 240 VKKENIFKLIENMLFLIFKNCININ-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
            +  +SEF +F   L      ++  +  K    +RA  + + E A+     GL   F ++
Sbjct: 299 RNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY--FTKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422
           +   N    G +AK L     + ++    +++ D  FF A +  +  C      R  IA 
Sbjct: 357 E---NNKFSGGIAKFLKTEEQKLMKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIAN 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481
           +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+   + +L+ N   +I    
Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI- 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F  +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFKIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV+
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583


>gi|329667229|gb|AEB93177.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 617

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/592 (37%), Positives = 349/592 (58%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N DS     EIA
Sbjct: 7   RTDYAGNITSKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGEKLMEIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E V+ + G V+ RS  ++N  + TG++E+ A +I++L+ ++  P  +  +    E
Sbjct: 67  DSLNNEDVIEVKGKVVKRS--SVNPEMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR TL + I+ R++I+ ++      + FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  + +  E +L+ + ++  N + +     RI +D+A+ +YG+DKPD R  + +H++
Sbjct: 244 FLDEQGVQDYTEGLLKKIMKDVMNID-LKTPIKRITWDEAMNKYGSDKPDTRYEMYLHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS   ++  G  V  I  K G    +R   +   ++ +     GLA++ 
Sbjct: 303 SPIFKDSDFKVFSG--AIADGGVVKGIAVKNGAKEYSRKKIEEKQDYIKRYNAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E G  +  GP+A+ L   N EA++   D++ G+    +A D  K  + + D  R  
Sbjct: 361 Y---EDGEFS--GPIARFLTDENKEALKKEFDLEGGELIVIVA-DKWKVVTDSLDHLRRE 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A E GII    F+F W++D+P +E++E   +   AH+PFTMP      L   D     A
Sbjct: 415 FAHETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G+
Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKSAYEQFGYLMDALDMGFPPHAGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+ M+L G  N+R+V+ FP + +  + +M +P+ V+ +QL ++G+ +
Sbjct: 535 AIGLDRLAMMLAGKDNIRDVTAFPKNASASEPMMHAPAPVADKQLTDIGIEV 586


>gi|269119759|ref|YP_003307936.1| aspartyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268613637|gb|ACZ08005.1| aspartyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 597

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/583 (38%), Positives = 345/583 (59%), Gaps = 15/583 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60
           YRTH+ G L + + G  V LSGWV  VR     +FL +RD  GITQV+ + +++    FE
Sbjct: 2   YRTHNLGQLRIENAGEEVVLSGWVANVRDMNHFLFLVLRDREGITQVIIDKENSPEGLFE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-RE 119
             K++ +E V+ + G V  RS++  N ++ TG IE++A  ++ILS + +LP  +      
Sbjct: 62  KVKALNNEDVVRVTGTVRERSSK--NKDMPTGDIEVAADTVDILSRSLQLPFAINDNITN 119

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLRR  +  N+ KR  ++ ++R  +  + F++  TP+L  ++PEGARD
Sbjct: 120 LSEDMRLKYRYLDLRRTKMLNNLKKRNTMLKAIRDYLTDKGFLDIDTPVLAKATPEGARD 179

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQ+LM +G D+Y+Q+A CFRDED R+DR P EF QLD+
Sbjct: 180 FIVPSRINKGDFYALPQSPQLFKQILMVAGVDKYYQLAKCFRDEDLRADRQP-EFTQLDI 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+DIL  ME + + VFE+ + G     +F R+ Y +A+ RYG+DKPD R  + +
Sbjct: 239 EMSFVTQEDILCEMEKMAKKVFEKVT-GKKADYDFPRMDYYEAMDRYGSDKPDTRFGLEL 297

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ-PGLAY 358
            ++TE   +S F+ F+         +   +P      +R +   +  + ++  +  GLA+
Sbjct: 298 IDITEEVRNSGFKAFAGAAESGGSIKAIVVPGNLEKFSRKYIGDLENYVKTYYKAKGLAH 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
           I  R+DE  N   + P+AK  +     AI  +L+++ G     IA D     + A  A R
Sbjct: 358 I--RIDE--NNETVSPIAKFFSEAELSAITGKLELKAGSIALIIA-DTKDVTNNALGALR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  EL  IN     F W++DFP +EW+EEE++    H+PFT  +   +     +L  I
Sbjct: 413 LKVGNELDFINEEQDNFLWVIDFPMFEWSEEEERYKSTHHPFTAIKEEDKEFLNKNLEKI 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +   YD+V NG+EI  G IR H SE+    F  +G+SKE  E +FG    A + G+PPHG
Sbjct: 473 RTLSYDMVLNGYEIGGGSIRIHDSELQDVIFEKLGLSKEEAEEKFGFFLNALRYGVPPHG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
           GIA G+DR +M +L   +++EV  FP +    DL+M +P+ V 
Sbjct: 533 GIAFGVDRWLMAMLKEDSIKEVIPFPKTNKGQDLMMEAPAAVD 575


>gi|313105850|ref|ZP_07792113.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|310878615|gb|EFQ37209.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 591

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/594 (39%), Positives = 340/594 (57%), Gaps = 9/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLD+RD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDVRDREGLAQVVFDPDRAETFAKAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R     N N+ +G IE+   ++E+L+ AE  P P+    +  E 
Sbjct: 63  WVRSEFVVKITGKVRLRPEGARNPNMASGSIEVLGYELEVLNQAETPPFPLDEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  +   +  R RI +S+R  +    F++  TPIL   +PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAAKLKLRARITSSIRRYLDDNGFLDVETPILGRPTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR   G F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTYPGHFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI+   E ++R +F+E    +   + F  + +++A+RRYG+DKPDLR P+ + +V 
Sbjct: 242 LDESDIIGITEKMVRQLFKEVL--DVEFDEFPHMPFEEAMRRYGSDKPDLRIPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   G     R+  D   ++    G  GLAYI   
Sbjct: 300 DQLKEVEFKVFSGPAN-DPKGRVAALRVPGAASMPRSQIDDYTKFVGIYGAKGLAYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K +   N   I  R+   DGD  FF A      C      R  +  
Sbjct: 359 ERAKGVEGLQSPIVKFIPEANLNVILNRVGAVDGDIVFFGADKAKIVCDALGALRIKVGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L ++    +   W++DFP +E N ++  +   H+PFT P+     L+ N   ++ +  Y
Sbjct: 419 DLKLLTRE-WAPMWVVDFPMFEEN-DDGSLSALHHPFTSPKCTPAELEANPGAAL-SRAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H   +    F  +GI +   E +FG L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTELGGGSIRIHDKSMQQAVFRVLGIDEAEQEEKFGFLLDALKYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR+VML+ GA ++REV  FP +Q+  D++  +P +V  + LREL +R+ E PK
Sbjct: 536 LDRLVMLMTGASSIREVIAFPKTQSAGDVMTQAPGSVDGKALRELHIRLREQPK 589


>gi|154505862|ref|ZP_02042600.1| hypothetical protein RUMGNA_03404 [Ruminococcus gnavus ATCC 29149]
 gi|153793880|gb|EDN76300.1| hypothetical protein RUMGNA_03404 [Ruminococcus gnavus ATCC 29149]
          Length = 612

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/592 (39%), Positives = 345/592 (58%), Gaps = 16/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RTH CG+L  +++G  V + GWV + R  GGI+F+D+RD  GI Q+V      +   E A
Sbjct: 23  RTHRCGELSSANIGEKVTVMGWVQKNRNKGGIVFMDLRDRSGILQIVFEGEEQAELMEKA 82

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+V+ + G V  RS   +N N+ TG+IE+ A+++ ILS +E  P  V    +  E
Sbjct: 83  SKLRSEFVVAVVGNVEKRSG-AVNENLATGEIEVRAEELRILSESEVPPFQVEENSKTKE 141

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  L +N+  R+++    R     E F+E  TPIL  ++PEGARD+LV
Sbjct: 142 ELRLKYRYLDLRRPDLQRNLRMRSQVTTLARQFFAEEGFLEIETPILGKTTPEGARDYLV 201

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFY LPQ+PQ YKQLLM SG DRY QIA CFRDED R+DR P EF Q+DME+S
Sbjct: 202 PSRVHPGSFYGLPQSPQLYKQLLMCSGCDRYIQIAKCFRDEDLRADRQP-EFTQIDMELS 260

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ DD++   E  L  +F+E  + + V     R+ + +A+ RYG+DKPD R  + + NV
Sbjct: 261 FVDVDDVIEVNERFLAKLFKEVLDVD-VQLPIQRMTWQEAMDRYGSDKPDTRFGMELVNV 319

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE    SEF VF    ++  G  V  I AKG G   R   D++  +A+  G  GLAYI  
Sbjct: 320 TETVKDSEFVVFKG--AIENGGTVRGINAKGQGAMPRKKIDKLVAFAKDFGAKGLAYI-- 375

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G V      +K +       +   ++ + GD   F A           + R  +A
Sbjct: 376 AIQEDGTVK--SSFSKFMTEEEMNNLIAAMNGEAGDLLLFAADKNKVVWDVLGNLRLELA 433

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL--SIKA 479
           +++ +++ N + F W+ +FP  EW++E+ +    H+PFTMP    E L+  D     ++A
Sbjct: 434 KQMELLDKNQYNFLWVTEFPLLEWSDEQNRYLAMHHPFTMPME--EDLQYIDFEPGRVRA 491

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G +R   ++V  + F  +G +KE    +FG L  AF+ G+PPH G+
Sbjct: 492 KAYDIVLNGNEIGGGSVRIFQNDVQEKMFEVLGFTKEQAYEQFGFLLDAFKYGVPPHAGL 551

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VML+    ++R+V  FP  ++   L+  +PS    +QL ELGL++
Sbjct: 552 AYGLDRMVMLMAKEDSIRDVMAFPKIKDASCLMTQAPSMADNKQLEELGLKL 603


>gi|218187544|gb|EEC69971.1| hypothetical protein OsI_00447 [Oryza sativa Indica Group]
          Length = 719

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/643 (36%), Positives = 346/643 (53%), Gaps = 70/643 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R   CG+LG  D G  VRL GWV   R H G+ FL +RD  G  QV   P+    + +  
Sbjct: 89  RDALCGELGAGDAGRRVRLCGWVALHRAHAGLTFLTLRDRSGTVQVTTLPEYPEVYAVVN 148

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFG----ER 118
            +R E V+ ++G+V SR  E IN ++ TG IE++A  I +L SV   LP P+      + 
Sbjct: 149 KLRVESVVAVEGVVRSRPTEAINTDMKTGAIEVAADNIYVLNSVTRSLPFPITTADTVKE 208

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEG 176
           ++PE IR ++R LDLRR  +  N+  R  ++  +R R + +  +F+E  TP+L+ S+PEG
Sbjct: 209 KFPEEIRLRFRVLDLRRPQMQSNLRLRHNVVKHIR-RFLEDRHDFVEIETPVLSKSTPEG 267

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSRV  G FYALPQ+PQ +KQ+LM SGF++Y+QIA CFRDED R+DR P EF Q
Sbjct: 268 ARDYLVPSRVQPGMFYALPQSPQLFKQMLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQ 326

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDME++F   +D+L   E ++R +F+E  +   + N F R+ Y +A+ RYGTD+PDLR  
Sbjct: 327 LDMEIAFTSMEDMLKLNEELMRHIFQEVGDIK-LPNPFPRLTYTEAMNRYGTDRPDLRFD 385

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD------RMNEWARS 350
             + +V++ F+ S F++F+  L      +   +P    GG + F +       +   A  
Sbjct: 386 WQLKDVSDAFLGSSFKIFADTLENGGVIKALCVP----GGAKEFSNTDLKKGTVYTEASK 441

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
            G  GL   F ++ ++G + G+GP+   L     E +   LD + GD   F  G+     
Sbjct: 442 AGAKGLP--FLKVMDNGELEGIGPLVSSLKPEKKEQLLKHLDAKSGDLILFALGEQSAAN 499

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF---------------- 454
                 R  IA +L +I+ +     W+ DFP +EWN +E++ +                 
Sbjct: 500 RILGRLRLFIAHKLEVIDTSAHSILWVTDFPMFEWNSDEQRYEVIVLTNKFKGQYQIIDS 559

Query: 455 ---------------------------AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                                       H+PFT P    E +  NDL S +A  YD++ N
Sbjct: 560 FWYFLWSQKRTLTSLQNANLIAMSQKALHHPFTAPNP--EDM--NDLPSARALAYDMIYN 615

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G EI  G +R + S+V  + F  +GIS E  E +FG L   F  G PPHGGIA G+DR+V
Sbjct: 616 GVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDMGAPPHGGIAYGLDRLV 675

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           MLL G  ++R+V  FP +      L  +PS V  +QL++LG R
Sbjct: 676 MLLAGENSIRDVIAFPKTTTAQCSLTKAPSPVDPQQLKDLGFR 718


>gi|254828247|ref|ZP_05232934.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258600635|gb|EEW13960.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 591

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/594 (39%), Positives = 341/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I    E++L  V +E  N  T+   F R+ Y +A+ R+G+DKPD+R  + + NV
Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++     +F+VF    ++  G EV AI AK      +R   D +  +  + G  GLA   
Sbjct: 302 SDVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E+G +   GP+AK         ++V L  +DGD   F A       +     RN +
Sbjct: 357 WLKVEAGELK--GPIAKFFPEDKAAELKVALQAEDGDLLLFAADKADIVAASLGALRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A 
Sbjct: 415 GKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA
Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+ 
Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKK 588


>gi|261378388|ref|ZP_05982961.1| aspartate--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269145159|gb|EEZ71577.1| aspartate--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 602

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/598 (39%), Positives = 354/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFVAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR T+ +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPTMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++  N++         P+ K L+    + I  R   Q+GD  FF   D  K  + A  A 
Sbjct: 356 NDVSNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFF-GADKTKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEYGKDNGYFVDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|54025619|ref|YP_119861.1| aspartyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|62287534|sp|Q5YTJ4|SYD_NOCFA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|54017127|dbj|BAD58497.1| putative aspartyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 597

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 238/596 (39%), Positives = 340/596 (57%), Gaps = 28/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+IF+D+RD  G++Q V     A  E A  
Sbjct: 3   RTHLAGSLRSEHAGQTVTLTGWVARRRDHGGVIFIDLRDASGVSQAVFREGEAA-EQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R     N  + TGQIE++ +++E+L+  E  PLP   + +  E  
Sbjct: 62  LRAEYCVRVTGVVEQRPDGNENPELPTGQIEVNVRELEVLN--ESAPLPFQLDEQPGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R K+R+LDLRR+     I  R+++  + R  +    F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLKHRYLDLRREGPAHAIRLRSKVNAAAREVLARHEFVEVETPTLTKSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G+FYALPQ+PQ +KQLLM  G +RYFQIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 180 RLQPGNFYALPQSPQLFKQLLMVGGIERYFQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQ D++   E +L  +++    G  +      + Y +A+RR+G+DKPDLR  + +   TE
Sbjct: 239 EQADVILLAEEILVALWKLI--GYEIPTPIPHMTYAEAMRRFGSDKPDLRFGVEITECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F ++ FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 297 YFKNTPFRVFQAPY-------VGAVVMPGGASQPRRQLDAWQEWAKQRGAKGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           +E G++   GPVAK+L+    E +   +  + GD  FF AG      +    AR  IA++
Sbjct: 348 NEDGSLG--GPVAKNLSDAEREGLAKHVGAEPGDCVFFAAGPAKAQRALLGAARGEIARK 405

Query: 424 LGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLKGND 473
           +G+I+ N + F WI+D P +E  ++     D A         H+ FT P+         D
Sbjct: 406 VGLIDENAWSFVWIVDAPLFEPADDATASGDVALGHSAWTAVHHAFTSPKPESLDTFDTD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  A+ YD+VCNG EI  G IR H  +V  + F  +GI ++  + +FG L  AF  G 
Sbjct: 466 PGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGIGEQEAQEKFGFLLDAFAYGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGGIA G DRIV LL G  ++REV  FP +    D L  +P+ ++ +Q +E GL
Sbjct: 526 PPHGGIAFGWDRIVALLAGLDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKEAGL 581


>gi|154490243|ref|ZP_02030504.1| hypothetical protein PARMER_00475 [Parabacteroides merdae ATCC
           43184]
 gi|154089135|gb|EDN88179.1| hypothetical protein PARMER_00475 [Parabacteroides merdae ATCC
           43184]
          Length = 613

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 231/592 (39%), Positives = 345/592 (58%), Gaps = 16/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT +CGDL ++D G  + L+GWV + R  GG+ F+DIRD YGITQ+V N   D+A  E 
Sbjct: 30  YRTRTCGDLRLADEGLVITLAGWVQKTRKMGGMTFVDIRDRYGITQLVFNQEVDAALCEK 89

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  RS++  N NI TG+IE+   ++ +L+ A   P  +  + +  
Sbjct: 90  ANKLGREYVIQVTGTVRERSSK--NPNIPTGEIEIIVSELNVLNAAVTPPFTIEDDTDGG 147

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR+ + KN+  R R+   +R  +  + F+E  TP+L  S+PEGARDF+
Sbjct: 148 DDLRMKYRYLDLRRNAVRKNLELRHRMAFEVRNYLDKQGFLEVETPVLVNSTPEGARDFV 207

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 208 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 266

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D+LN  E + + +F+    G  +   F RI + DA++ YG+DKPDLR  +    
Sbjct: 267 SFVEQEDVLNIFEGMAKHLFKVI-RGIDIKEAFPRISWHDAMKYYGSDKPDLRFDMKFVE 325

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y V  I A+G     R   D + E+ +         ++
Sbjct: 326 LMDIMKGHGFSVFD-----NAAY-VGGICAEGAASYTRKQLDALTEFVKRPQIGAKGMVY 379

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  GNV     V K       + ++     + GD    ++G D +K      + R  
Sbjct: 380 ARVEADGNVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 437

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A +LG+ + N F   W++DFP +EW+EE+++    H+PFT P+     L  +D  +++A
Sbjct: 438 VAGQLGLRDKNKFACLWVIDFPLFEWSEEDQRFYAMHHPFTSPKPEDIPLLDSDTGAVRA 497

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++  + F  +G ++E  + RFG L  AF+ G PPHGG+
Sbjct: 498 NAYDMVINGVEVGGGSIRIHDSKLQDKMFQLLGFTEEKAQERFGFLMNAFKYGAPPHGGL 557

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR V L  G  ++R+   FP + +  D+++ +P  +   QL EL L++
Sbjct: 558 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGQLDDSQLEELCLKV 609


>gi|332971843|gb|EGK10789.1| aspartate--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 602

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/596 (39%), Positives = 349/596 (58%), Gaps = 14/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F++A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFKLAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IEIL+ A   P  +  +    E+
Sbjct: 62  SARNEFVLSITGRVRNRPEGTSNDKMISGKIEILAKEIEILNAAATPPF-MIDDENISET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + KN+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQKNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHAGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y DA+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GDFPRMAYWDAMFNYGSDKPDMRISLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTQFVGIYGAKGLAYIKVND 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              L    N     P+ K L+    + I  R   ++GD  FF A D  K  + A  A R 
Sbjct: 358 VTNLSNGENSGLQSPIVKFLSENALKEIIARTGAENGDIIFFGA-DKAKVVNEAIGALRI 416

Query: 419 HIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            I +E G+ N    + ++  W++DFP +E++EE  +    H+PFT P+ G   L  +D  
Sbjct: 417 KIGKEHGLENGYFVDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHVGLMTSDPE 476

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              A  YD+V NG+EI  G IR H +++  + F+ + IS E  + +FG L    + G PP
Sbjct: 477 KCLARAYDMVLNGWEIGGGSIRIHRADMQEKVFAALKISPEEQQEKFGFLLDNLKFGAPP 536

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+
Sbjct: 537 HGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELHLRL 592


>gi|198274757|ref|ZP_03207289.1| hypothetical protein BACPLE_00916 [Bacteroides plebeius DSM 17135]
 gi|198272204|gb|EDY96473.1| hypothetical protein BACPLE_00916 [Bacteroides plebeius DSM 17135]
          Length = 587

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/592 (38%), Positives = 348/592 (58%), Gaps = 16/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           +R+H+CG+L ++D G  V L+GWV R R  GG+ F+D+RD YGITQ+V N +  +   E 
Sbjct: 2   FRSHTCGELRLADAGKNVTLAGWVQRARKMGGMTFVDLRDRYGITQLVFNTEVNAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  RS++  NANI TG+IE+   ++ IL+ A+  P  +    +  
Sbjct: 62  ANHLGREFVIQVKGTVSERSSK--NANIPTGEIEIIVSELNILNSAQTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  + KN+  R R+   +R  + ++ F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRTAVRKNLELRHRMTMEVRRYLDSKGFLEVETPMLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI+NT E + + +F+E   G  ++  FLR+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQEDIINTFEGMAKHLFKEL-RGVELTEPFLRMPWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G     R   D++ E+ +         ++
Sbjct: 298 LMDVLKGYGFSVFD-----NAAY-IGGICAEGAAHYTRKQLDQLTEFVKRPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  G V     V K  +    + ++     + GD    ++G D +K      + R  
Sbjct: 352 ARIEADGTVK--SSVDKFYSQEVLQKMKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  +++A
Sbjct: 410 MGNQLGLRDKNKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S +  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVINGVEVGGGSIRIHDSALQAKMFEILGFTPEKAQEQFGFLMNAFKFGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR V L  G  ++R+   FP + +  D+++ +P  +  +QL EL L+I
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGFLDQKQLDELNLKI 581


>gi|94968233|ref|YP_590281.1| aspartyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550283|gb|ABF40207.1| aspartyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 601

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 239/603 (39%), Positives = 345/603 (57%), Gaps = 29/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63
           RTH CG+L  +D    V L GWV+R R  GG+IF+D+RD  GITQ+V  N +S     A 
Sbjct: 12  RTHKCGELRAADANKNVVLMGWVNRRRDLGGLIFIDLRDRTGITQIVFDNSNSELQAKAG 71

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V  R A T+N N+ TG+IE+ A+++ + + ++ LP  +       E 
Sbjct: 72  DLRSEYCIAVIGTVAKREANTVNKNLPTGEIEVVAKEMRLFNDSKVLPFSIADNSNVNEE 131

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  +  N+  R  +  ++R  + ++NF+E  TPI+T S+PEGARD+LVP
Sbjct: 132 VRLKYRYLDLRRPEMQANVQMRHDVTFAIRNYLASQNFLEVETPIMTRSTPEGARDYLVP 191

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQ+LM S  +RYFQIA CFRDED R+DR P EF Q+D+EM+F
Sbjct: 192 SRVHPGEFYALPQSPQIFKQILMISNCERYFQIARCFRDEDLRADRQP-EFTQIDLEMTF 250

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
             QDD+   +E  L   +   + G+ +   F R+ YDDAIR+YG DKPDLR P  M++V 
Sbjct: 251 PTQDDVFGVVEGFLTAAWA--AAGHKLEGKFPRMSYDDAIRQYGIDKPDLRLP-AMNDVK 307

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
             F     +     + ++       +P K G  +R   D +     ++    L   F RL
Sbjct: 308 SAFAAENLQTLG--IDLDLPVVCVRVP-KIGELSRKERDDLKPMLNAKSGAKLFEDFKRL 364

Query: 364 DESGNVAGMGPVAKHLNIVNTEA---IRVRLDMQDGDSCFFIAGDPLKFCSF--AADARN 418
           ++S   A     AK   IV  E    + V    Q  +    I      +  +  A   R 
Sbjct: 365 EKSFPEAA----AKIKEIVKPEESDLLVVVAGAQRAEKASEIVTRNQSYAVYGAAGQVRL 420

Query: 419 HIAQEL----GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM----PQGGMESLK 470
            IAQ+     G      F+F W+ DFPF+EW+E +K+ + AH+PFT       G +ES  
Sbjct: 421 AIAQKYSDRHGCFKKGEFKFLWVTDFPFFEWDENDKRWNAAHHPFTSCHEEDMGKLESDP 480

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           G     ++A  YD+V NG E+ SG IR H  ++    F ++G+  E  + RFG    A Q
Sbjct: 481 G----GVRALAYDVVLNGTELGSGSIRIHRQDIQSIIFKSLGMGPEEQQQRFGFFLEALQ 536

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DRIVM+L GA ++REV  FP +    DL+M +P+ VS EQL++L ++
Sbjct: 537 YGTPPHGGIALGLDRIVMILAGATSLREVITFPKTAAATDLMMDAPTPVSAEQLQQLNIK 596

Query: 591 IVE 593
           + +
Sbjct: 597 VTK 599


>gi|284032291|ref|YP_003382222.1| aspartyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283811584|gb|ADB33423.1| aspartyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 596

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 240/600 (40%), Positives = 342/600 (57%), Gaps = 35/600 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTHS G L     G  V L+GWV R R HGG+ F+D+RD  G  QVV   +    E+A  
Sbjct: 3   RTHSAGSLRAEHTGQTVTLAGWVARRRDHGGVAFIDLRDASGTVQVVIRDE----EVAHP 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--E 122
           +R+E+ L I G V +R     N N+ TG+IE+ A ++E+L+ A  LP PV      P  E
Sbjct: 59  LRAEFCLKIVGEVSARPEGNANPNLPTGEIEVIAAEVEVLNEAAPLPFPVEEHHATPVNE 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR      +  R+++  + R  +   +F+E  TP LT S+PEGARDFLV
Sbjct: 119 EVRLKYRYLDLRRQGPGAALRLRSKVNKAARDVLARHDFVEIETPTLTKSTPEGARDFLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMS
Sbjct: 179 PARLQPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+QDD++   E +L  +++    G+ V     R+ Y +A+ R+G+DKPDLR  + +   
Sbjct: 238 FVDQDDVIALSEEILVELWK--LAGHEVQTPIQRMTYAEAMARFGSDKPDLRMGLELVEC 295

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFW 361
           TE+F  + FRVF           V A+   GG    R   D   +WA+ +G  GLAY+  
Sbjct: 296 TEYFKDTPFRVFQ-------AQYVGAVVMPGGADQPRKQLDAWQDWAKQRGAKGLAYVL- 347

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + + G +   GPVAK+L+      +   +  + GD  FF AG      +    AR  I 
Sbjct: 348 -VGQDGELG--GPVAKNLSEAERAGLADHVGAKPGDCVFFAAGPVKSSRALLGAARLEIG 404

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKG 471
           +  G+I+ + + F W++D P +E  ++     D A         H+ FT P+   ESL  
Sbjct: 405 RRGGLIDESAWSFVWVVDAPLFEPADDATAAGDVAVGSGAWTAVHHAFTSPK--PESLDS 462

Query: 472 --NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              D  S  A+ YD+VCNG EI  G IR H  +V  + F+ +G+++E    +FG L  AF
Sbjct: 463 FDTDPGSALAYAYDIVCNGNEIGGGSIRIHREDVQKRVFTVMGLTEEEATEKFGFLLDAF 522

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGGIA G DRI  LL GA ++R+V  FP S    D L  +P+ ++ EQ +E G+
Sbjct: 523 KFGAPPHGGIAFGWDRITALLAGADSIRDVIAFPKSGGGYDPLTAAPAPITAEQRKEAGV 582


>gi|332673584|gb|AEE70401.1| aspartate--tRNA ligase [Helicobacter pylori 83]
          Length = 577

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/589 (37%), Positives = 342/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+    G+ +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHHISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  + D Q GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTDAQTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTEYGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|227495473|ref|ZP_03925789.1| aspartate--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831020|gb|EEH63403.1| aspartate--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 594

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 238/604 (39%), Positives = 343/604 (56%), Gaps = 38/604 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  S  G  V ++GWV R R HGG++F+D+RD  GI QVV   ++    +A  
Sbjct: 8   RTHEIGSLNASLEGETVTVAGWVDRRRDHGGVVFVDLRDASGIAQVVVRDEA----VAHK 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----Y 120
           +RSE+VL + G V  R     N ++ TG+IEL    IEIL+  + LP  +    +     
Sbjct: 64  LRSEFVLKVTGEVARRPEGNENTSLSTGEIELLGDHIEILNTCDALPFQISDNADDSGKV 123

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR+LDLRR      I  R+++  + R  +    F+E  TP LT S+PEGARDF
Sbjct: 124 GEETRLRYRYLDLRRSPAQYAIRLRSKVSQAARKVLDQHKFVEIETPTLTRSTPEGARDF 183

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 184 LVPARLSPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIE 242

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD++   E+VL+ V+     G  +     R+ + DA+ +YG+DKPDLR  + + 
Sbjct: 243 MSFVEQDDVIGVAEDVLKEVWGTI--GYDLPTPIPRMTFKDAMEKYGSDKPDLRFGLEIV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           ++TE+F ++ FRVF           V A+   GGG   R   D+  EWA+S+G  GLAY+
Sbjct: 301 DLTEYFKNTPFRVFQSDY-------VGAVVMPGGGSQARRTFDKWQEWAKSRGAKGLAYV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              + E G +   GPVAK+++      ++      +GD  FF AG   +  +     R  
Sbjct: 354 --TISEDGELG--GPVAKNISAEERAGLQAATGAANGDCVFFGAGKADEARALLGATRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQ----GGMES 468
           I +  G+I+ + + F W++D P ++ + ++  +D         H+ FT P        E 
Sbjct: 410 IGKRTGLIDEDAWSFVWVVDAPLFKPSGQDDDVDLGNSKWTAVHHAFTSPNPDWIDNFEE 469

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
             G  L    A+ YD+VCNG EI  G IR H  +V  + F+ +GI  E  + +FG L  A
Sbjct: 470 NPGEAL----AYAYDIVCNGNEIGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDA 525

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           F+ G PPHGGIA G DRIV LL  + ++R+V  FP S    D L  +P+ ++ EQ  E G
Sbjct: 526 FKFGAPPHGGIAFGWDRIVSLLTKSDSIRDVIAFPKSGGGFDPLTQAPAPITPEQRAEAG 585

Query: 589 LRIV 592
           +  V
Sbjct: 586 VDYV 589


>gi|218768770|ref|YP_002343282.1| aspartyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|24212422|sp|Q9JT23|SYD_NEIMA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|121052778|emb|CAM09124.1| aspartyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|319411010|emb|CBY91408.1| aspartyl-tRNA synthetase (aspartate-tRNA ligase; AspRS) [Neisseria
           meningitidis WUE 2594]
          Length = 602

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/598 (39%), Positives = 354/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGA-DKTKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|152984996|ref|YP_001349894.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|150960154|gb|ABR82179.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 590

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/594 (39%), Positives = 339/594 (57%), Gaps = 9/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLD+RD  G+ QVV +PD A  F  A 
Sbjct: 2   RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDVRDREGLAQVVFDPDRAETFAKAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R     N N+ +G IE+   ++E+L+ AE  P P+    +  E 
Sbjct: 62  RVRSEFVVKITGRVRLRPEGARNPNMASGSIEVLGYELEVLNQAETPPFPLDEYSDVGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  +   +  R RI +S+R  +    F++  TPIL   +PEGARD+LVP
Sbjct: 122 TRLRYRFIDLRRPEMAAKLKLRARITSSIRRYLDDNGFLDVETPILGRPTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR   G F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYPGHFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI+   E ++R +F+E        + F  + +++A+RRYG+DKPDLR P+ + +V 
Sbjct: 241 LDESDIIAITEKMVRQLFKEVL--GVEFDEFPHMPFEEAMRRYGSDKPDLRIPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   G     R+  D   ++    G  GLAYI   
Sbjct: 299 DQLQEVEFKVFSGPAN-DPKGRVAALRVPGAASMPRSQIDDYTKFVGIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K +   N   I  R+   DGD  FF A      C      R  +  
Sbjct: 358 ERAKGVEGLQSPIVKFIPEANLNVILDRVGAVDGDIVFFGADKARIVCDALGALRIKVGH 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L ++    +   W++DFP +E N ++  +   H+PFT P+     L+ N   ++ +  Y
Sbjct: 418 DLKLLTKE-WAPMWVVDFPMFEEN-DDGSLSALHHPFTSPKCTPAELEANPGAAL-SRAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H   +    F  +GI +   E +FG L  A + G PPHGG+A G
Sbjct: 475 DMVLNGTELGGGSIRIHDKAMQQAVFRVLGIDEAEQEEKFGFLLDALKYGAPPHGGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR+VML+ GA ++REV  FP +Q+  D++  +P +V  + LREL +R+ E PK
Sbjct: 535 LDRLVMLMTGASSIREVIAFPKTQSAGDVMTQAPGSVDGKALRELHIRLREQPK 588


>gi|42519261|ref|NP_965191.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|41583549|gb|AAS09157.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 617

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/592 (37%), Positives = 349/592 (58%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N DS     EIA
Sbjct: 7   RTDYAGNITSKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGEKLMEIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E V+ + G V+ RS  ++N  + TG++E+ A +I++L+ ++  P  +  +    E
Sbjct: 67  DSLNNEDVIEVKGKVVKRS--SVNPEMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR TL + I+ R++I+ ++      + FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  + +  E +L+ + ++  N + +     RI +D+A+ +YG+DKPD R  + +H++
Sbjct: 244 FLDEQGVQDYTEGLLKKIMKDVMNID-LKTPIKRITWDEAMNKYGSDKPDTRYEMYLHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS   ++  G  V  I  K G    +R   +   ++ +     GLA++ 
Sbjct: 303 SPIFKDSDFKVFSG--AIADGGVVKGIAVKNGAKEYSRKKIEEKQDYIKRYNAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E G  +  GP+A+ L   N EA++   D++ G+    +A D  K  + + D  R  
Sbjct: 361 Y---EDGEFS--GPIARFLTDENKEALKKEFDLEGGELIVIVA-DKWKVVTDSLDHLRRE 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A E GII    F+F W++D+P +E++E   +   AH+PFTMP      L   D     A
Sbjct: 415 FAHETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G+
Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+ M+L G  N+R+V+ FP + +  + +M +P+ V+ +QL ++G+ +
Sbjct: 535 AIGLDRLAMMLAGKDNIRDVTAFPKNASASEPMMHAPAPVADQQLADIGIEV 586


>gi|15676377|ref|NP_273513.1| aspartyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|24212423|sp|Q9K0U5|SYD_NEIMB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|7225693|gb|AAF40903.1| aspartyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|316984745|gb|EFV63704.1| aspartyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325140886|gb|EGC63395.1| aspartyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325199651|gb|ADY95106.1| aspartyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 602

 Score =  415 bits (1067), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAEFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++  N++         P+ K+L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVSNLSNGEDSGLQSPIVKYLSENALKEIIARTGAQNGDIIFFGA-DKAKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|268319358|ref|YP_003293014.1| hypothetical protein FI9785_875 [Lactobacillus johnsonii FI9785]
 gi|262397733|emb|CAX66747.1| aspS [Lactobacillus johnsonii FI9785]
          Length = 617

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/592 (37%), Positives = 349/592 (58%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N DS     EIA
Sbjct: 7   RTDYAGNITSKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGEKLMEIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E V+ + G V+ RS  ++N  + TG++E+ A +I++L+ ++  P  +  +    E
Sbjct: 67  DSLNNEDVIEVKGKVVKRS--SVNPEMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR TL + I+ R++I+ ++      + FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  + +  E +L+ + ++  N + +     RI +D+A+ +YG+DKPD R  + +H++
Sbjct: 244 FLDEQGVQDYTEGLLKKIMKDVMNID-LKTPIKRITWDEAMNKYGSDKPDTRYEMYLHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS   ++  G  V  I  K G    +R   +   ++ +     GLA++ 
Sbjct: 303 SPIFKDSDFKVFSG--AIADGGVVKGIAVKNGAKEYSRKKIEEKQDYIKRYNAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E G  +  GP+A+ L   N EA++   D++ G+    +A D  K  + + D  R  
Sbjct: 361 Y---EDGEFS--GPIARFLTDENKEALKKEFDLEGGELIVIVA-DKWKVVTDSLDHLRRE 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A E GII    F+F W++D+P +E++E   +   AH+PFTMP      L   D     A
Sbjct: 415 FAHETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G+
Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+ M+L G  N+R+V+ FP + +  + +M +P+ V+ +QL ++G+ +
Sbjct: 535 AIGLDRLAMMLAGKDNIRDVTAFPKNASASEPMMHAPAPVADKQLTDIGIEV 586


>gi|226224120|ref|YP_002758227.1| aspartyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|259511864|sp|C1KVG6|SYD_LISMC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225876582|emb|CAS05291.1| aspartyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|328465557|gb|EGF36786.1| aspartyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 591

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/594 (39%), Positives = 340/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNSSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I    E++L  V +E  N  T+   F R+ Y +A+ R+G+DKPD+R  + + NV
Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++     +F+VF    ++  G EV AI AK      +R   D +  +  + G  GLA   
Sbjct: 302 SDVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E+G +   GP+AK         ++  L  +DGD   F A       +     RN +
Sbjct: 357 WLKVEAGELK--GPIAKFFPEEKATELKASLQAEDGDLLLFAADKADIVAASLGALRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A 
Sbjct: 415 GKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA
Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+ 
Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKK 588


>gi|325145003|gb|EGC67286.1| aspartyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 602

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/598 (39%), Positives = 355/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    +L  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCMLTNAPNSVDDKQLRELSLRL 592


>gi|292493817|ref|YP_003529256.1| aspartyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291582412|gb|ADE16869.1| aspartyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 595

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 234/590 (39%), Positives = 340/590 (57%), Gaps = 7/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R+H CGDL  + +   V L GWV+R R HGG+IF+D+RD  G+ Q+V +P+ +   F  A
Sbjct: 2   RSHYCGDLSEAHIDQEVTLCGWVNRRRDHGGVIFIDLRDREGLIQLVFDPEDSLDNFRRA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VRSE+VL + G V  R   T N ++ TGQ+E+ AQ++ +L+ AE  P PV  + E  E
Sbjct: 62  EQVRSEYVLQVKGRVRPRPEGTENPDLATGQVEVLAQELVLLNAAETPPFPVDEKLEVSE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR +YR++DLRR    + +  R+ II  +R  +    F++  TP+LT S+PEGARDFLV
Sbjct: 122 EIRLRYRYIDLRRPESLQRLRFRSEIIRQLRKFLDERGFLDIDTPVLTKSTPEGARDFLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + G F+ALPQ+PQ +KQLLM +G DRY+Q+  CFRDED R+DR P EF QLD+E S
Sbjct: 182 PSRTHPGQFFALPQSPQLFKQLLMIAGVDRYYQMVRCFRDEDLRADRQP-EFTQLDIETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +D+ +  ME +++ +F     G  +   F+R+ Y +A+  +G DKPDLR P+ +  V
Sbjct: 241 FLHEDEFMGLMEEMIKELFATVL-GVPLHTPFIRMPYAEALACFGLDKPDLRIPLRLVEV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF++      G  V A+   GGG  +R   D   ++    G  GLAYI  
Sbjct: 300 GDLMKTVEFKVFAEPAQDREG-RVAALRLPGGGKLSRKEIDDYTKFVAIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+ K L      AI  R   +DGD  FF A             R  + 
Sbjct: 359 VERSRGREGLQSPILKFLPDEVVGAIMDRTGAEDGDVIFFGADKASIVNEALGALRVKLG 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            + G++  + +   W++DFP +EW+E   + +  H+PFT P+     L   +  + ++  
Sbjct: 419 HDHGLVE-HGWRPLWVIDFPMFEWDESSNRWNALHHPFTSPKEEDLPLLEQNPGACRSRA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G +R   S V  Q F  +GI  E  + +FG L  A + G PPHGGIA 
Sbjct: 478 YDLVLNGTEVGGGSMRIFRSPVQSQVFRLLGIGDEEAKEKFGFLLDALKYGCPPHGGIAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VML+ G+ ++REV  FP +Q     L G+P  V+  QLRELG+R+
Sbjct: 538 GLDRLVMLMTGSASIREVIAFPKTQTAACPLTGAPGLVAEAQLRELGIRV 587


>gi|269792196|ref|YP_003317100.1| aspartyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099831|gb|ACZ18818.1| aspartyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 599

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 241/592 (40%), Positives = 339/592 (57%), Gaps = 25/592 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+  CG + +S  GS V L+GW+ R R  GGIIFL++ DH G  QVV NP+ A    + A
Sbjct: 14  RSVKCGLVDLSMAGSQVVLNGWLRRRRDLGGIIFLELWDHTGAVQVVINPEVAPEAHDRA 73

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K VRSE+V+ I G V  R   T N ++ TGQ+E+ AQ I +LS ++ LP  +       E
Sbjct: 74  KEVRSEYVMAIRGSVQRRPQGTENPDMPTGQVEVVAQDILVLSPSKPLPFEIGEADRVDE 133

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YRFLDLRR+ +  N+  R+      R  ++   F+E  TP+LT S+PEGARDFLV
Sbjct: 134 NLRLRYRFLDLRRERMQHNLRVRSAAAQFTRNYLVQNGFLEVETPMLTKSTPEGARDFLV 193

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G F+ALPQ+PQ +KQ+LM SG DRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 194 PSRVNPGKFFALPQSPQIFKQILMVSGCDRYFQIVKCFRDEDLRADRQP-EFTQVDLEMS 252

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ ++D+ + +E  +RG+F+E   G  +   F RI + +A+  YG+DKPDLR P  M ++
Sbjct: 253 FITEEDVFSLLEGYMRGLFKEIL-GEEIPTPFRRITWREAMDLYGSDKPDLRIPEAMVDL 311

Query: 303 TE--HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           TE   F  S  +   +   V  G  +      G   +R     +   A   G  GLA I 
Sbjct: 312 TEVMGFEGSPLQEVKESGGVVKGLRL----PGGAKLSRKEVSNLEARAVELGARGLAVI- 366

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRL----DMQDGDSCFFIAGDPLKF-CSFAAD 415
               +    A  GP  K ++    EA R RL    ++ DGD+   +A    +  C     
Sbjct: 367 ----QRNGEALKGPFVKIMD----EAARARLIEASNLGDGDAVLILADRSWRTACEVLGA 418

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  + + +G++    + F W++DFP +EW++EE +    H+PFT P+     L   D  
Sbjct: 419 LRLEVFRSMGLVE-EGWRFLWVVDFPLFEWDQEEGRYVSVHHPFTSPKEEDLDLMERDPG 477

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           S+++  YDLV NG E+  G IR H   V  + F  +G  +E + +RFG L  A   G PP
Sbjct: 478 SVRSRAYDLVLNGSEVGGGSIRIHHPVVQERVFKALGFEEEQLRDRFGFLLDALSYGTPP 537

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           HGG+A G DR+ M+L GA+++REV  FP +Q    LL G+PS V   QL EL
Sbjct: 538 HGGLALGFDRLTMMLCGARSIREVMAFPKTQRAQCLLSGAPSQVDRSQLDEL 589


>gi|46577184|sp|Q7TYA6|SYD_MYCBO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 609

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 245/618 (39%), Positives = 344/618 (55%), Gaps = 35/618 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANP-DSACFEIA 62
           R+H+ G L   D G  V L+GWV R R HGG+IF+D+RD  GI QVV  +P D+     A
Sbjct: 3   RSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEVLAQA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+E+ + + G+V  R     N  I TG+IE++A  + +L   E  PLP   +    E
Sbjct: 63  HRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLG--ECAPLPFQLDEPAGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRRD     I  R+R+  + R  +   +F+E  TP +T S+PEGARDFLV
Sbjct: 121 ELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGARDFLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMS
Sbjct: 181 PARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +DI+   E VL  ++     G  +     RI Y +A+RR+GTDKPDLR  + +   
Sbjct: 240 FVDAEDIIAISEEVLTELWALI--GYRIPTPIPRIGYAEAMRRFGTDKPDLRFGLELVEC 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFW 361
           T+ F  + FRVF           V A+   GG    R   D   +WA+ +G  GLAY+  
Sbjct: 298 TDFFSDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAYVL- 349

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G +   GPVAK+L       +   +  + GD  FF AG      +    AR  IA
Sbjct: 350 -VAEDGTLG--GPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARVEIA 406

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKI----------DFAHNPFTMPQGGMESLKG 471
             LG+I+ + + F W++D P +E  +E                 H+ FT P+   E    
Sbjct: 407 NRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWEDRIE 466

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +D  S+ A  YD+VCNG EI  G +R H  ++  + F+ +G+ K  VE +FG L  AF  
Sbjct: 467 SDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEVEEKFGFLLEAFMF 526

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DR   LL G  ++REV  FP +    D L  +P+ ++ +Q +E G  I
Sbjct: 527 GAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESG--I 584

Query: 592 VENPKKILK----ISVTT 605
              PK++ +     +VTT
Sbjct: 585 DAQPKRVQRHDQIFAVTT 602


>gi|227890123|ref|ZP_04007928.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849298|gb|EEJ59384.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 617

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/592 (37%), Positives = 349/592 (58%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N DS     EIA
Sbjct: 7   RTDYAGNITSKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGEKLMEIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E V+ + G V+ RS  ++N  + TG++E+ A +I++L+ ++  P  +  +    E
Sbjct: 67  DSLNNEDVIEVKGKVVKRS--SVNPEMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR TL + I+ R++I+ ++      + FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  + +  E +L+ + ++  N + +     RI +D+A+ +YG+DKPD R  + +H++
Sbjct: 244 FLDEQGVQDYTEGLLKKIMKDVMNID-LKTPIKRITWDEAMNKYGSDKPDTRYEMYLHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS   ++  G  V  I  K G    +R   +   ++ +     GLA++ 
Sbjct: 303 SPIFKDSDFKVFSG--AIADGGVVKGIAVKNGAKEYSRKKIEEKQDYIKRYNAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E G  +  GP+A+ L   N EA++   D++ G+    +A D  K  + + D  R  
Sbjct: 361 Y---EDGEFS--GPIARFLTDENKEALKKEFDLEGGELIVIVA-DKWKVVTDSLDHLRRE 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A E GII    F+F W++D+P +E++E   +   AH+PFTMP      L   D     A
Sbjct: 415 FAHETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G+
Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+ M+L G  N+R+V+ FP + +  + +M +P+ V+ +QL ++G+ +
Sbjct: 535 AIGLDRLAMMLAGKDNIRDVTAFPKNASASEPMMHAPAPVADKQLTDIGIEV 586


>gi|62287580|sp|Q74IX4|SYD_LACJO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 614

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/592 (37%), Positives = 349/592 (58%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N DS     EIA
Sbjct: 4   RTDYAGNITSKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGEKLMEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E V+ + G V+ RS  ++N  + TG++E+ A +I++L+ ++  P  +  +    E
Sbjct: 64  DSLNNEDVIEVKGKVVKRS--SVNPEMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR TL + I+ R++I+ ++      + FI+  TPIL  SSPEGARD+LV
Sbjct: 122 QTRLKYRYLDLRRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S
Sbjct: 182 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  + +  E +L+ + ++  N + +     RI +D+A+ +YG+DKPD R  + +H++
Sbjct: 241 FLDEQGVQDYTEGLLKKIMKDVMNID-LKTPIKRITWDEAMNKYGSDKPDTRYEMYLHDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS   ++  G  V  I  K G    +R   +   ++ +     GLA++ 
Sbjct: 300 SPIFKDSDFKVFSG--AIADGGVVKGIAVKNGAKEYSRKKIEEKQDYIKRYNAKGLAWVK 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E G  +  GP+A+ L   N EA++   D++ G+    +A D  K  + + D  R  
Sbjct: 358 Y---EDGEFS--GPIARFLTDENKEALKKEFDLEGGELIVIVA-DKWKVVTDSLDHLRRE 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A E GII    F+F W++D+P +E++E   +   AH+PFTMP      L   D     A
Sbjct: 412 FAHETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G+
Sbjct: 472 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+ M+L G  N+R+V+ FP + +  + +M +P+ V+ +QL ++G+ +
Sbjct: 532 AIGLDRLAMMLAGKDNIRDVTAFPKNASASEPMMHAPAPVADQQLADIGIEV 583


>gi|317122077|ref|YP_004102080.1| aspartyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315592057|gb|ADU51353.1| aspartyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 615

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 240/591 (40%), Positives = 336/591 (56%), Gaps = 10/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           R   CG++    VG  + ++GWVHRVR  GG+ F++IRD  G  Q+V   A    A    
Sbjct: 28  RDLGCGEVRPEHVGRTLAVAGWVHRVRDLGGMKFVEIRDRTGRLQLVINRAEAPEAVVRA 87

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++R+E+V+   G V  R+ E +N  + TG++EL  +++ ILS ++  P  +    +  
Sbjct: 88  AENLRAEFVVAARGPVRRRAPEAVNPRLATGEVELVPEQLWILSTSKTPPFELDAAADVD 147

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R +YR+LDLRR  + +N+  R R    +R       F+E  TP+LT S+PEGARD+L
Sbjct: 148 EALRLRYRYLDLRRPEMFRNLWLRHRAYQVVRRYFDRHGFLEVETPMLTRSTPEGARDYL 207

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM +G +RYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 208 VPSRLYPGRFYALPQSPQLFKQLLMVAGLERYFQIVRCFRDEDLRADRQP-EFTQIDVEM 266

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+L   E ++  ++ E   G  VS    R+ Y +A+ RYG+DKPDLR    + +
Sbjct: 267 SFVDVDDVLAVAEGMMAELWRELL-GVEVSLPLPRLTYAEAMARYGSDKPDLRYEPAIAD 325

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V++ F  + FR F   L    G  V A+ A GG   +R   D ++E AR+ G  G+A+I 
Sbjct: 326 VSDVFSATGFRAFRAALEA--GGAVRALRAPGGAALSRKELDGLDEAARAAGAGGVAWIA 383

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E    A  GPV K        A+  RL +Q GD     A  P +        R  +
Sbjct: 384 --VPEPDPAAWRGPVVKFFTPEERAALAGRLGLQAGDLVLLAADQPERASVVLGKLRLQL 441

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ LG      +   WI+DFP  EW+EEE +    H+PFT P+         D   ++A 
Sbjct: 442 AERLGWPRVREWALAWIVDFPLLEWDEEEGRYVARHHPFTSPRDEDLDRLETDPAGVRAK 501

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+EI  G IR H  +V  + F  +G+  E    RFG L  AF+ G PPHGGIA
Sbjct: 502 AYDLVLNGYEIGGGSIRIHRRDVQERVFRAIGLPPEKARERFGFLLEAFEYGPPPHGGIA 561

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G DRIVML  GA ++R+V  FP +    D L G+P+ V   QL EL LR+
Sbjct: 562 FGFDRIVMLAAGASSIRDVIAFPKTARAVDPLTGAPAEVDPGQLEELQLRV 612


>gi|254670608|emb|CBA06571.1| Aspartyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 602

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/598 (39%), Positives = 354/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +     F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GGFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|227488805|ref|ZP_03919121.1| aspartyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227091227|gb|EEI26539.1| aspartyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
          Length = 610

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 244/607 (40%), Positives = 342/607 (56%), Gaps = 31/607 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L   + G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +S   E A  
Sbjct: 11  RTHLAGELRKENAGDTVTLTGWVARRRDHGGVIFIDLRDRSGLAQVVFR-ESEVAEQAHH 69

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121
           +RSE+ + + G+V +R   + N N+ +G IE++  ++EIL+ +  LP  +       E  
Sbjct: 70  LRSEFCIKVTGVVEARPEGSSNPNLPSGDIEVNVSELEILNESAALPFQIDDPSSSGEVG 129

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR+     +  R++   + R  +   +F E  TP LT S+PEGARDFL
Sbjct: 130 EETRLKYRYLDLRRERQADALRLRSKANRAARAVLDKHDFTEIETPTLTRSTPEGARDFL 189

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G++YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 190 VPARLKPGTWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 248

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E +L  ++     G  +     R+ Y +A+ +YG+DKPDLR  I +  
Sbjct: 249 SFVDQDDVIVLAEEILTALWGLI--GYEIKTPIPRMTYKEAMEKYGSDKPDLRFDIQIVE 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360
            TE F  + FRVF      NP   V A+   GG    R   D   +WA+ +G  GLAYI 
Sbjct: 307 CTEFFKDTTFRVFQ-----NP--YVGAVVMDGGASQPRRQLDAWQDWAKQRGAKGLAYIL 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G ++  GPVAK++     E I   +  + GD  FF AGD     +    AR  I
Sbjct: 360 --VGEDGTLS--GPVAKNITDAEREGIAAHVGAKPGDCIFFAAGDAKNSRALLGAARGEI 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLK 470
           A +LG+I    + F W++D P +E + +     D A         H+ FT P+       
Sbjct: 416 ANKLGLIKEGDWAFTWVVDAPLFEPSADATASGDVALGHSSWTAVHHAFTSPKPESMDTF 475

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  S  A+ YD+VCNG EI  G IR H  +V  + F  +GI++E    +FG L  AF 
Sbjct: 476 DTDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAREKFGFLLDAFA 535

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ ++ EQ +E G+ 
Sbjct: 536 FGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGIDPLTDAPAAITPEQRKEAGID 595

Query: 591 IVENPKK 597
               PKK
Sbjct: 596 F--KPKK 600


>gi|71065761|ref|YP_264488.1| aspartyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|97196821|sp|Q4FSF4|SYD_PSYA2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71038746|gb|AAZ19054.1| aspartyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 608

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 231/602 (38%), Positives = 355/602 (58%), Gaps = 20/602 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIA 62
           YR   CG +  S +   + + GWVHR R HGG+IFLD+RD  GI QVV +PD+   F  A
Sbjct: 6   YRDEYCGAVTESLIEQTISVVGWVHRRRDHGGVIFLDMRDRAGILQVVVDPDTPEAFATA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
            +VR E+VL I G V  R   T NAN+ +G IEL A++IE+L+ +E  P P+  E+    
Sbjct: 66  DAVRPEYVLKITGRVRRRYEGTENANMTSGHIELLAKEIEVLAKSETPPFPLNDEKSTVS 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LD+RR  +   +V R +  +++R  +    F++  TPILT ++PEGARD+L
Sbjct: 126 EDLRLKYRYLDMRRPQMQDRMVFRAKATSAIRRYLDDHGFLDVETPILTRATPEGARDYL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E 
Sbjct: 186 VPSRTRPGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIET 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ +++I+N  E +++ VF+     +     F R+ Y +A+R Y +DKPDLR P+ + +
Sbjct: 245 SFLNEEEIMNINEGLIKHVFKTMM--DVEFEKFPRMTYAEAMRDYASDKPDLRIPLKLID 302

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V +     +F+VF+   + +P   V A+   GG   +R   D   ++    G  GLAYI 
Sbjct: 303 VADLMKDVDFKVFAGPAN-DPKGRVAALRIPGGASLSRKQIDAYTKFVGIYGARGLAYI- 360

Query: 361 WRLDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
            +++++ N+       +G+  P+ K++      ++  R   +  D  FF A         
Sbjct: 361 -KVNDASNINNGVDKESGLQSPIIKNMTDDVLVSLIERTGAESNDIIFFGADKASVVNDA 419

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               R  I  +L +  C  +   W+ DFP +E  E+ +     H+PFT P+G +E LK N
Sbjct: 420 IGALRQKIGLDLEMTTCE-WAPLWVTDFPMFEETEDGRWTSM-HHPFTKPKGSVEELKTN 477

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
              ++ +  YD+V NG E+  G +R +  E+    F  +GI  +  E++FG L  A + G
Sbjct: 478 PESAL-SIAYDMVLNGTEVGGGSLRINTLEMQTAVFEALGIDDQEAEDKFGFLLDALKFG 536

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V+ +QLRELG+R+ 
Sbjct: 537 APPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTAECPLTQAPAEVNTKQLRELGIRVR 596

Query: 593 EN 594
           E 
Sbjct: 597 EK 598


>gi|238852665|ref|ZP_04643075.1| aspartate--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834811|gb|EEQ27038.1| aspartate--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 617

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/592 (38%), Positives = 350/592 (59%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N DS     +IA
Sbjct: 7   RTDYAGNITSKYEGQEVNLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGKELMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E V+ + G V+ RS  ++N ++ TG++E+ A +I++L+ ++  P  +  +    E
Sbjct: 67  DSLNNEDVIEVKGKVVKRS--SVNPDMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR TL K I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPTLQKAIMLRSKILKATHEYFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F ++  + +  E +L+ + ++   G  +     RI +D+A+ +YG+DKPD R  + +H++
Sbjct: 244 FTDEKQVQDYTEGLLKKIMKDVM-GIDLKTPIKRITWDEAMNKYGSDKPDTRYEMFIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS  ++ + GY V  I  K G    +R   +   ++ +     GLA++ 
Sbjct: 303 SPIFKDSDFKVFSGAIA-DGGY-VKGIAVKNGAKQYSRKKIEEKQDYIKRYHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E G  +  GPV++ L   N EA++   D++ G+   F+A D  K  + + D  R  
Sbjct: 361 Y---EDGEFS--GPVSRFLTDENKEALKKEFDLEGGELVVFVA-DKWKVVTDSLDHLRRE 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GII  N ++F W++D+P +E++E   +   AH+PFTMP      L   D     A
Sbjct: 415 FAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G+
Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLLDALDMGFPPHAGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR  M+L    N+R+V+ FP + +  + +M +P+ V+ +QL ++G+++
Sbjct: 535 AIGLDRFAMMLAQKDNIRDVTAFPKNASASEPMMHAPAPVADQQLDDIGIKV 586


>gi|255025791|ref|ZP_05297777.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 591

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/594 (39%), Positives = 340/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I    E++L  V +E  N  T+   F R+ Y +A+ R+G+DKPD+R  + + NV
Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +      +F+VF    ++  G EV AI AK      +R   D +  +  + G  GLA   
Sbjct: 302 SNVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E+G +   GP+AK         ++V L  +DGD   F A       +     RN +
Sbjct: 357 WLKVEAGELK--GPIAKFFPEDKAAELKVALQAEDGDLLLFAADKADIVAASLGALRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A 
Sbjct: 415 GKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA
Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+ 
Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKK 588


>gi|315656682|ref|ZP_07909569.1| aspartate--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315492637|gb|EFU82241.1| aspartate--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 599

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 239/601 (39%), Positives = 344/601 (57%), Gaps = 31/601 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R H C +L ++  G  V L GWV R R HGG+ F+D+RD  GI Q+V +      E+ + 
Sbjct: 3   RNHKCAELNLNHDGQTVTLCGWVDRRRDHGGVAFMDLRDASGIVQLVVS-----EEVVRE 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE---YP 121
           VR+E+VL + G V  R     N +I TG+IE+ A  +EIL+    LP  V    E     
Sbjct: 58  VRNEYVLKVTGKVRKRPEGNENPDIATGEIEVMADDVEILNSCATLPFQVSEHAEDSKVG 117

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR +YRF+DLRR  LH N+V R+RI    R  M    F+E  TP LT S+PEGARDF+
Sbjct: 118 EDIRLRYRFVDLRRRQLHDNLVLRSRISQIARRVMEEHEFLEIETPTLTRSTPEGARDFV 177

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLLM  G +RYFQ+A C+RDED R+DR P EF QLDMEM
Sbjct: 178 VPARIRPGSWYALPQSPQLFKQLLMVGGMERYFQLARCYRDEDSRADRQP-EFTQLDMEM 236

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E++L+ +++    G  ++    R+ + +A+ R+G+DKPDLR    + +
Sbjct: 237 SFVDQDDVIEVTEHLLKEIWKVI--GYDLTTPIPRMPFQEAMDRFGSDKPDLRFGYELVD 294

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+ F  + F++F       P      +P  G    R F D+  EWA+++G  GLAY+  
Sbjct: 295 LTDFFKDTPFKIFQA-----PYVGAVVMPGGGSQPRRTF-DKWQEWAKARGAKGLAYV-- 346

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            LDE G     GPVAK+++      +      Q GD  FF AGD     +    AR  I 
Sbjct: 347 TLDEKGEAG--GPVAKNISDAEKVGLAAATGAQPGDCIFFAAGDKTASQTLLGAARLEIG 404

Query: 422 QELGIINCNCFEFCWIMDFPFYEWN-EEEKKIDFA---------HNPFTMPQGGMESLKG 471
           +   +I+   + F W++D P ++ + E E + D A         H+ FT P+        
Sbjct: 405 RRCNLIDEKAWAFTWVVDAPLFKPSGEAEAEGDVALGHSAWTAVHHAFTSPKPECLDTFD 464

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D  S  A+ YD+VCNG E+  G IR H  ++  + F  +G S+E  + RFG L  AF+ 
Sbjct: 465 TDPGSALAYAYDIVCNGVELGGGSIRIHRRDIQERVFKVMGFSQEEAQARFGFLLDAFKY 524

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G DRI  +L G+ ++R+V  FP + +  D L G+P+ ++ EQ +E G+  
Sbjct: 525 GAPPHGGLALGWDRIAGMLTGSPSIRDVIAFPKAGDGLDPLTGAPAPITDEQRKETGVDY 584

Query: 592 V 592
           V
Sbjct: 585 V 585


>gi|260205893|ref|ZP_05773384.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289575280|ref|ZP_06455507.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis K85]
 gi|289539711|gb|EFD44289.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis K85]
          Length = 596

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 243/611 (39%), Positives = 340/611 (55%), Gaps = 31/611 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANP-DSAC 58
           M   R+H+ G L   D G  V L+GWV R R HGG+IF+D+RD  GI QVV  +P D+  
Sbjct: 1   MFVLRSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEV 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
              A  +R+E+ + + G+V  R     N  I TG+IE++A  + +L   E  PLP   + 
Sbjct: 61  LAQAHRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLG--ECAPLPFQLDE 118

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R KYR+LDLRRD     I  R+R+  + R  +   +F+E  TP +T S+PEGAR
Sbjct: 119 PAGEELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGAR 178

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD
Sbjct: 179 DFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLD 237

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSFV+ +DI+   E VL  ++     G  +     RI Y +A+RR+GTDKPDLR  + 
Sbjct: 238 MEMSFVDAEDIIAISEEVLTELWALI--GYRIPTPIPRIGYAEAMRRFGTDKPDLRFGLE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           +   T+ F  + FRVF           V A+   GG    R   D   +WA+ +G  GLA
Sbjct: 296 LVECTDFFSDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLA 348

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+   + E G +   GPVAK+L       +   +  + GD  FF AG      +    AR
Sbjct: 349 YVL--VAEDGTLG--GPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAAR 404

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI----------DFAHNPFTMPQGGME 467
             IA  LG+I+ + + F W++D P +E  +E                 H+ FT P+   E
Sbjct: 405 VEIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWE 464

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
               +D  S+ A  YD+VCNG EI  G +R H  ++  + F+ +G+ K  VE +FG L  
Sbjct: 465 DRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEVEEKFGFLLE 524

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF  G PPHGGIA G DR   LL G  ++REV  FP +    D L  +P+ ++ +Q +E 
Sbjct: 525 AFMFGAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKES 584

Query: 588 GLRIVENPKKI 598
           G  I   PK++
Sbjct: 585 G--IDAQPKRV 593


>gi|15895537|ref|NP_348886.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|24212414|sp|Q97GU6|SYD_CLOAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|15025273|gb|AAK80226.1|AE007728_5 Aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325509685|gb|ADZ21321.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 595

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/593 (39%), Positives = 352/593 (59%), Gaps = 19/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG++  + +G+ V + GWV R R  GG++F+D+RD  GI QVV   +     F  A
Sbjct: 10  RTIMCGEIRENHIGNRVVVMGWVQRKRNLGGLVFVDLRDREGILQVVFGEEINKDAFMKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             V+SE+ + + G ++ R  E+ N N+ TG +EL  ++I+ILS +E  P+ +    +  E
Sbjct: 70  DLVKSEYCISVSGTLVKR--ESPNPNMPTGMVELKGEEIKILSESETPPIYIKENLDAAE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR +YR+LDLRR  + K    R +    +R  M  ENF+E  TPILT S+PEGARD+LV
Sbjct: 128 NIRLRYRYLDLRRPDMQKIFKIRHKTTKIIRDFMDEENFLEMETPILTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FYALPQ+PQ +KQLLM SG+D+YFQIA CFRDED R++R P EF Q+DMEMS
Sbjct: 188 PSRNYNGKFYALPQSPQLFKQLLMVSGYDKYFQIAKCFRDEDLRANRQP-EFTQVDMEMS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE+DD++   E +++ VF+E + G  V     R+ +  A+ +YG+DKPDLR  + ++++
Sbjct: 247 FVEEDDVIELNERLIQKVFKEMA-GVEVKLPIERMTWKTAMEKYGSDKPDLRFGMEINDI 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           +E    S+F+VF    ++  G  V AI A       R   D++ E+ ++    GLA+I  
Sbjct: 306 SEAVSTSDFKVFKS--AIEEGGSVRAIKAPNSADMPRKKIDKLGEFVKTYKAKGLAWIAL 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           + D         P+AK L     +AI  ++  + GD    +A  + + F S  A  R  I
Sbjct: 364 KED-----GIKSPIAKFLKEEELKAIIDKVQGKTGDLILIVADKNSVVFQSLGA-LRLEI 417

Query: 421 AQELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           A+EL I+  N  F F WI +FP   +NEEE++    H+PFTMP         +D   ++A
Sbjct: 418 AKELEILKDNKEFRFVWITEFPLLSYNEEEERFQAEHHPFTMPMDEDIEYLESDPGRVRA 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G +R H + +  + F  +G +KE    RF  L  AF+ G PPH G+
Sbjct: 478 KAYDIVLNGEELGGGSVRIHDTALQERMFKVLGFTKESAWERFSFLLEAFKFGPPPHAGL 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR++M L G +N+++V  FP +QN FC  L  +P+ V   Q+ ELG+++
Sbjct: 538 AYGLDRLIMFLAGTENIKDVIAFPKNQNAFCP-LTEAPNVVDENQIEELGIKV 589


>gi|271967379|ref|YP_003341575.1| aspartyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
 gi|270510554|gb|ACZ88832.1| aspartyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
          Length = 578

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/586 (40%), Positives = 334/586 (56%), Gaps = 19/586 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG++F+D+RD  G +QVV   +    + A  
Sbjct: 3   RTHEAGSLRKEHAGQQVTLAGWVARRRDHGGVVFIDLRDASGSSQVVFREE----DDAHG 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  + TG IE+ A ++E+LS +  LP P+ G     E  
Sbjct: 59  LRAEYCVKVVGEVRVRPEGNENPELPTGAIEVVASEVEVLSESAPLPFPIEGNAGVSEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LD+RR  +   +  R++        M    F    TP LT S+PEGARDFLVP 
Sbjct: 119 RLKYRYLDIRRQQVANAMRIRSKATYLAHEVMNEHGFNYIETPTLTRSTPEGARDFLVPV 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM +G +RY+Q+A CFRDED R+DR P EF Q+D+EMSFV
Sbjct: 179 RLQPGSWYALPQSPQLFKQLLMVAGMERYYQLARCFRDEDLRADRQP-EFTQIDVEMSFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E ++  +++E + G  +     R+ Y DA+ RYG+DKPDLR    +  +TE
Sbjct: 238 DQDDVIALGEALVGRIWKE-TIGYELPTPLPRMTYWDAMSRYGSDKPDLRFGQELVEMTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+   GG   +R   D   +WA+S+G  GLAY+   +
Sbjct: 297 YFADTTFRVFQAPY-------VGAVVMPGGASQSRKELDGWQDWAKSRGARGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G + G  PVAK+L+      +  +   + GD+ FF AG           AR  I + 
Sbjct: 348 GEDGALGG--PVAKNLSETEAAGLAAKTGAKPGDAIFFAAGTAAASRDLLGAARLEIGRR 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G+I+ + + F WI+D P +E  + E      H+PFT P+        +      A+ YD
Sbjct: 406 CGLIDESAWNFLWIVDAPMFE-EDGEGGWTAVHHPFTGPKPEWADNFQDHPGEALAYAYD 464

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +VCNG EI  G IR H +E+  + F  +GISKE  EN+FG L  AF+ G PPHGGIA G 
Sbjct: 465 MVCNGMEIGGGSIRIHRAEMQQRVFDVLGISKEEAENKFGFLLEAFKYGPPPHGGIAYGW 524

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           DRI MLL G  ++R+V  FP + +  D L G+P+ ++ EQ +E G+
Sbjct: 525 DRICMLLAGGDSIRDVIAFPKTASGFDPLTGAPTPITGEQRKEAGV 570


>gi|149375108|ref|ZP_01892880.1| aspartyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149360472|gb|EDM48924.1| aspartyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 601

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/590 (40%), Positives = 354/590 (60%), Gaps = 13/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  S +   V L GWVHR R HGG+IFLD+RD  GI+QVV +PD+   F +A+
Sbjct: 2   RSHYCGGINESHIDQEVTLCGWVHRRRDHGGVIFLDLRDRDGISQVVFDPDTPESFNLAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V  R A T NAN+ TGQ+EL  +++ IL+ A   P P+    +  E 
Sbjct: 62  KVRSEFVIQVTGRVRRRPAGTENANMPTGQVELLGKQLSILNAAATPPFPLDEHVDVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYRF+DLRR  +   +  R+R+ + +R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKYRFVDLRRPEMLNRLRFRSRVTSYIRNFLDSNGFMDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++GSF+ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQP-EFTQIDIEASF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ ++   EN++R +F++    +     F R+ Y +A++RYG+DKPDLR P+ + +V 
Sbjct: 241 IDEEALMTLNENMIRSLFKDVLEVDL--PEFPRMPYAEAMQRYGSDKPDLRIPLELVDVG 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF+   + +P   V A+   KGG   R   D   ++    G  GLAYI   
Sbjct: 299 DLVAGVDFKVFAGPAN-DPKGRVAALRVPKGGELTRKQIDDYTKYVGIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
            D S  V G+  P+ K L     +A+  R   +DGD  FF A D     + A  A R  +
Sbjct: 358 -DTSKGVEGLQSPIIKFLGDDVAQAVIERSGAEDGDIVFFGA-DKTNVVNEALGALRIKV 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +L ++    +   W++DFP +E    +  +   H+PFT P    + L+ +   ++ + 
Sbjct: 416 GHDLNMLTSE-WAPLWVVDFPMFE-ETSDGSLTAIHHPFTAPSCSGDELEASPATAL-SR 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  ++    F  +GI  E    +FG L  A + G PPHGG+A
Sbjct: 473 AYDMVLNGTELGGGSIRIHDEKMQESVFRTLGIEHEEARAKFGFLLDALKYGCPPHGGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G+DR++ML+ GA ++R+V  FP +Q+   L+  +P  V  +QLREL +R
Sbjct: 533 FGLDRLIMLMTGASSIRDVIAFPKTQSATCLMTQAPGEVDDKQLRELHIR 582


>gi|116629515|ref|YP_814687.1| aspartyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|116095097|gb|ABJ60249.1| aspartyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
          Length = 617

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/592 (38%), Positives = 350/592 (59%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N DS     +IA
Sbjct: 7   RTDYAGNITSEYEGQEVNLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGKELMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E V+ + G V+ RS  ++N ++ TG++E+ A +I++L+ ++  P  +  +    E
Sbjct: 67  DSLNNEDVIEVKGKVVKRS--SVNPDMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR TL K I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPTLQKAIMLRSKILKATHEYFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F ++  + +  E +L+ + ++   G  +     RI +D+A+ +YG+DKPD R  + +H++
Sbjct: 244 FTDEKQVQDYTEGLLKKIMKDVM-GIDLKTPIKRITWDEAMNKYGSDKPDTRYEMFIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS  ++ + GY V  I  K G    +R   +   ++ +     GLA++ 
Sbjct: 303 SPIFKDSDFKVFSGAIA-DGGY-VKGIAVKNGAKQYSRKKIEEKQDYIKRYHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E G  +  GPV++ L   N EA++   D++ G+   F+A D  K  + + D  R  
Sbjct: 361 Y---EDGEFS--GPVSRFLTDENKEALKKEFDLEGGELVVFVA-DKWKVVTDSLDHLRRE 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GII  N ++F W++D+P +E++E   +   AH+PFTMP      L   D     A
Sbjct: 415 FAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G+
Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLLDALDMGFPPHAGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR  M+L    N+R+V+ FP + +  + +M +P+ V+ +QL ++G+++
Sbjct: 535 AIGLDRFAMMLAQKDNIRDVTAFPKNASASEPMMHAPAPVADQQLDDIGIKV 586


>gi|251780139|ref|ZP_04823059.1| aspartate--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084454|gb|EES50344.1| aspartate--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 599

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 242/602 (40%), Positives = 358/602 (59%), Gaps = 25/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+     VG  + L GWV R R  GG+ F+D+RD  GI QVV   +  +  FE A
Sbjct: 10  RTMMCGEPREEHVGQKITLMGWVQRNRKLGGLDFIDLRDKTGIMQVVFGEEINAEAFEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K VR E+ + + G V+ R  E++N N+ TG +EL  + ++ILS +E  P+ +    +  E
Sbjct: 70  KGVRPEYCIAVTGEVVKR--ESVNENMPTGFVELKCESLKILSESETPPIYIKENLDAAE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR  +H+    R++   S+R  +   +F++  TP+LT S+PEGARD+LV
Sbjct: 128 NIRLKYRYLDLRRPDMHRIFEIRSKTTKSIRDYLEKNDFLDVETPMLTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYPGMFYALPQSPQIFKQLLMVSGFDKYYQIVKCFRDEDLRANRQP-EFTQVDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDDI+   E ++  VF+E + G  V     R+ + DA+ +YG+DKPDLR  + + N+
Sbjct: 247 FVEQDDIMALNEGLIAHVFKEVA-GVDVKLPIKRMTFKDAMEKYGSDKPDLRFGMEITNI 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE     +F VF    ++  G  V A+  KGG    R   D++ E+ ++    GLA+I  
Sbjct: 306 TEDVKDMDFVVFKS--AIEAGGSVRALCLKGGAELGRKPLDKLGEFVKTYKAKGLAWI-- 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           +L E G  +    +AK L    T +I   +  + GD+   +A  + + F S  A  R  +
Sbjct: 362 QLKEDGVKSS---IAKFLTDDVTNSIIETMGAETGDAILIVADKESVVFQSLGA-LRLEL 417

Query: 421 AQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESLKGNDLL 475
           A++  +I + N F F WI +FP +E++EEE++    H+PFT P       +ES  G    
Sbjct: 418 AKQFELIKDKNEFNFTWITEFPLFEYSEEEERYTACHHPFTAPMEEDLDFLESAPGK--- 474

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            +++  YDLV NG E+  G IR H  E+  + F  +G ++E    RFG L +AF+ G PP
Sbjct: 475 -VRSKAYDLVLNGEELGGGSIRIHDMELQQRMFKALGFTEEQAWERFGFLLQAFKFGPPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGG+A G+DR++M L G +N+++V  FP +QN    L  +P+    +QL ELG+ I+   
Sbjct: 534 HGGLAFGLDRMIMFLAGTENIKDVIAFPKNQNAYCYLSEAPNIADEKQLTELGIGILPKQ 593

Query: 596 KK 597
           +K
Sbjct: 594 EK 595


>gi|308388667|gb|ADO30987.1| aspartyl-tRNA synthetase [Neisseria meningitidis alpha710]
          Length = 602

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/598 (39%), Positives = 354/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGA-DKTKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|225552077|ref|ZP_03773017.1| aspartyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371075|gb|EEH00505.1| aspartyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 586

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 349/592 (58%), Gaps = 12/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+ N +    +IA+
Sbjct: 2   FKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVN-EEKLLKIAE 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + I GL++ R    INAN+ TG  E+ A+ IEI+S   ELP  +       E+
Sbjct: 61  KIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDNNNASEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + +YR+LDLR+D+L   I+ R +  + +R  +I   F+E  TP    S+PEGARDF+VP
Sbjct: 121 SKLEYRYLDLRKDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++++I   +EN+L  +F+   N N +   F +I Y  A+ +YG+DKPD R  + + +++
Sbjct: 240 VKKENIFKLIENMLFLIFKNCININ-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
            +  +SEF +F   L      ++  +  K    +R   + + E A+     GL   F ++
Sbjct: 299 RNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRTKINNLEEIAKLYKAQGLY--FTKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422
           +   N    G +AK L     E ++    +++ D   F A +  +  C      R  IA 
Sbjct: 357 E---NNKFSGGIAKFLKTEEQELMKT-YSLENNDIILFTANNNWETACKAMGQIRIKIAN 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481
           +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+   + +L+ N   +I    
Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI- 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV+
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583


>gi|149199233|ref|ZP_01876271.1| aspartyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149137658|gb|EDM26073.1| aspartyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 591

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 337/591 (57%), Gaps = 15/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG+L   +    V LSGW+   R  GG+IFLD+RD  G  QV   PD+      + 
Sbjct: 3   RTHKCGELRPENKDQEVILSGWIKSRRDLGGLIFLDLRDRSGFVQVNIEPDAGEELMSLG 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+R EWV+ + G V  R    IN  + TG +E+  Q ++I + A  +P  +  ++   E
Sbjct: 63  NSLREEWVISVKGKVRCRPENMINKKLPTGAVEVVVQDLKIENKARPMPFNLDDDK-VNE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LD RR  L + +V R RI  ++R     +NF+E  TPIL+ S+PEGARD+LV
Sbjct: 122 EMRLRYRYLDFRRPALTEKMVLRHRITKTLRDYFDDQNFLEIETPILSKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQAPQQYKQLLM  G +RYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 182 PSRVHPGQFYALPQAPQQYKQLLMVGGLERYFQIARCFRDEDLRADRQP-EFTQVDLEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++DI + +E ++  + +E   G  +   F R+ Y +A+ R+G+DKPD R  + + N+
Sbjct: 241 FIDEEDIYSLLEGLMSRIMKEV-KGIDIPTPFQRLDYFEAMTRFGSDKPDTRFGMELINL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW---ARSQGQPGLAYI 359
                +SEF+VF+  L+   G  + AI  K GG   A    + EW   A+  G  GLA I
Sbjct: 300 EPALKNSEFKVFADTLA--NGGRIGAINVK-GGNKFATNKTIKEWTAHAQLYGAKGLATI 356

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             + D S   +    + K L      AI    +++  D     A      C      R H
Sbjct: 357 QVKEDGSWKSS----ITKFLKEDEVAAITETANLEVDDVLLIAADSFTTSCEVLGQLRLH 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA++  +I  + + + W+ DFP    +EE +     H+PFT P         +D  SI+A
Sbjct: 413 IAKQTDMIPEDQWNYLWVTDFPLLVQDEETQDWHAMHHPFTAPHESDRDKMQSDRGSIRA 472

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG E+  G IR H +++  + F  +GIS+E  +++FG +  A   G PPHGG+
Sbjct: 473 RAYDLVLNGCELGGGSIRIHDTQLQSEMFDALGISQEEAQHQFGHILDALAFGAPPHGGL 532

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           A G+DR+VMLL GA ++REV  FP +     L+  SPS VS +QL EL ++
Sbjct: 533 ALGLDRMVMLLTGASSLREVIPFPKTAKASCLMTQSPSPVSDDQLEELSIK 583


>gi|116872948|ref|YP_849729.1| aspartyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123466329|sp|A0AIW8|SYD_LISW6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116741826|emb|CAK20950.1| aspartyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 591

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 234/594 (39%), Positives = 342/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+ CG+L  + +   V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTNYCGELNETHIDQHVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGKVHARGEKAINEKLATGKVEILAEEITILNTSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ ++ I    E++L  V +E + G T+   F R+ Y +A+ R+G+DKPD+R  + + NV
Sbjct: 243 FLTKEKIQAITEDMLIDVVKE-AKGITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E     +F+VF    ++  G EV AI AK      +R   D +  +  + G  GLA   
Sbjct: 302 SEVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGIFVSNYGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E+G +   GP+AK         ++  L  +DGD   F A       +     RN +
Sbjct: 357 WLKVEAGELK--GPIAKFFPEEKALELKAALKAEDGDLLLFAADKADIVAASLGALRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L +IN +   F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A 
Sbjct: 415 GKDLNLINEDELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA
Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L+I + 
Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSDAQLDELKLQITKK 588


>gi|31793755|ref|NP_856248.1| aspartyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121638457|ref|YP_978681.1| aspartyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|224990951|ref|YP_002645638.1| aspartyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|31619349|emb|CAD94787.1| PUTATIVE ASPARTYL-TRNA SYNTHETASE ASPS (ASPARTATE--TRNA LIGASE)
           (ASPRS) (ASPARTIC ACID TRANSLASE) [Mycobacterium bovis
           AF2122/97]
 gi|121494105|emb|CAL72583.1| Putative aspartyl-trna synthetase aspS [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|224774064|dbj|BAH26870.1| aspartyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
          Length = 611

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 246/622 (39%), Positives = 345/622 (55%), Gaps = 35/622 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANP-DSAC 58
           M   R+H+ G L   D G  V L+GWV R R HGG+IF+D+RD  GI QVV  +P D+  
Sbjct: 1   MFVLRSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEV 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
              A  +R+E+ + + G+V  R     N  I TG+IE++A  + +L   E  PLP   + 
Sbjct: 61  LAQAHRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLG--ECAPLPFQLDE 118

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R KYR+LDLRRD     I  R+R+  + R  +   +F+E  TP +T S+PEGAR
Sbjct: 119 PAGEELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGAR 178

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD
Sbjct: 179 DFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLD 237

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSFV+ +DI+   E VL  ++     G  +     RI Y +A+RR+GTDKPDLR  + 
Sbjct: 238 MEMSFVDAEDIIAISEEVLTELWALI--GYRIPTPIPRIGYAEAMRRFGTDKPDLRFGLE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           +   T+ F  + FRVF           V A+   GG    R   D   +WA+ +G  GLA
Sbjct: 296 LVECTDFFSDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLA 348

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+   + E G +   GPVAK+L       +   +  + GD  FF AG      +    AR
Sbjct: 349 YVL--VAEDGTLG--GPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAAR 404

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI----------DFAHNPFTMPQGGME 467
             IA  LG+I+ + + F W++D P +E  +E                 H+ FT P+   E
Sbjct: 405 VEIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWE 464

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
               +D  S+ A  YD+VCNG EI  G +R H  ++  + F+ +G+ K  VE +FG L  
Sbjct: 465 DRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEVEEKFGFLLE 524

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF  G PPHGGIA G DR   LL G  ++REV  FP +    D L  +P+ ++ +Q +E 
Sbjct: 525 AFMFGAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKES 584

Query: 588 GLRIVENPKKILK----ISVTT 605
           G  I   PK++ +     +VTT
Sbjct: 585 G--IDAQPKRVQRHDQIFAVTT 604


>gi|326559250|gb|EGE09681.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 598

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 232/603 (38%), Positives = 355/603 (58%), Gaps = 20/603 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +   + ++GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RSTYCGQVTEELIDQTITIAGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
           + RSE++L I G V  R   T N N+++GQ+EL  ++IE+L+ ++  P P+  +     E
Sbjct: 63  AARSEYLLKITGRVRRRYEGTENPNMVSGQVELLGKEIELLAKSDTPPFPLNDDNITVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLD+RR  + + +  R +  +++R  +    F++  TP+LT ++PEGARD+LV
Sbjct: 123 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  QG+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRTRQGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I++  E + + +F+     +   + F R+ Y DA+R Y +DKPDLR P+ + +V
Sbjct: 242 FLSDEEIMDITEGLTKNLFKTML--DVEFDTFPRMTYADAMRDYASDKPDLRIPLKLIDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +   H EF+VFS       G  V      GG  +R   D   ++    G  GLAYI  +
Sbjct: 300 ADIMQHVEFKVFSGPAQDPKGRVVALRIPNGGNMSRKQIDEYTKFVGIYGARGLAYI--K 357

Query: 363 LDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           ++++ N+       +G+  P+ K++       +  R D Q GD  FF   D  K  + A 
Sbjct: 358 VNDASNINNGVEKESGLQSPIIKNMTDEVLIELIERTDAQTGDIIFF-GADKAKIVNDAM 416

Query: 415 DA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            A R  I  +L +  C  +   W++DFP +E  ++ K     H+PFT P+G +  LK + 
Sbjct: 417 GALRVKIGTDLNLFTCE-WAPLWVVDFPMFEETDDGKWTS-VHHPFTRPKGSVAELKQSP 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             ++ +  YD+V NG EI  G +R +  ++    F  +GISKE  E +F  L  A + G 
Sbjct: 475 ETAL-SIAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKEEAELKFKFLMDALRFGA 533

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V   QLRELG+RI E
Sbjct: 534 PPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTEAPAEVDNRQLRELGIRIRE 593

Query: 594 NPK 596
             K
Sbjct: 594 KQK 596


>gi|315038169|ref|YP_004031737.1| aspartyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276302|gb|ADQ58942.1| aspartyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 617

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 226/602 (37%), Positives = 347/602 (57%), Gaps = 15/602 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +G  V L GWV RVR  G ++F+D+RD  G+ Q+V N DS     +IA
Sbjct: 7   RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKELMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E+VL + G V+ RS   +N ++ TGQ+E+ A +I IL+ A+  P  +    +  E
Sbjct: 67  DSLGNEYVLQVKGKVVKRS--EVNPDMKTGQVEVDATEIIILNKAKNPPFEIKNGVDISE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +++ I    E +L+ + ++   G  +     RI + DA+ +YG+DKPD R  +++H++
Sbjct: 244 FADEETIQGYTEGLLKKIMKDV-KGIDLKTPIKRITWTDAMNKYGSDKPDTRYGMLIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS   ++  G  V  I  K G    +R   D+  ++ +     GLA++ 
Sbjct: 303 SSIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKEYSRKKLDKKADFIKRFHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E G  +  GPVA+ L   N EA++   D++ G+   F+A      C      R   
Sbjct: 361 Y---EDGEFS--GPVARFLTDDNKEALKKEFDLEGGELVVFVADKWKVICDSLNHLRREF 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+E GII    ++F W++D+P +E++E   +   AH+PFTMP      L   +     A 
Sbjct: 416 AKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHKAHAR 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H   +    F  +G +K+    +FG L  A   G PPH G+A
Sbjct: 476 SYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGLA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DR  M+L    N+R+V  FP + +  + +M +P+ V+ +QL +LG+ + +  +  +K
Sbjct: 536 IGLDRFAMMLADKDNIRDVLAFPKNASASEPMMHAPAPVADQQLADLGIEVEDKYQDSVK 595

Query: 601 IS 602
            +
Sbjct: 596 AT 597


>gi|189465657|ref|ZP_03014442.1| hypothetical protein BACINT_02017 [Bacteroides intestinalis DSM
           17393]
 gi|189433921|gb|EDV02906.1| hypothetical protein BACINT_02017 [Bacteroides intestinalis DSM
           17393]
          Length = 585

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 230/590 (38%), Positives = 343/590 (58%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           +R+H+CG+L +SDV   V L+GWV R R  GG+ F+D+RD YGITQ+V N   D+A  E 
Sbjct: 2   FRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVDAALCEN 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ I G V  R ++  NANI TG IE+   ++ +L+ A   P  +    +  
Sbjct: 62  ANRLGREFVIQITGTVNERFSK--NANIPTGDIEIIVSELNVLNAALTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR ++ +N+  R R+   +R  + ++ FIE  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRPSVRRNLELRHRMTIEVRRYLDSQGFIEVETPVLVGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQDDI+N  E + + +F+E   G  +   F R+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQDDIINLFEGMTKYLFKEI-RGVELEGQFQRMAWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      +    +  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDILKGHGFSVF------DSAEYIGGICAEGAAHYTRKQLDALTEFVKRPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++E G+V     V K       + ++     + GD    ++G D +K      + R  
Sbjct: 352 ARIEEDGSVK--SSVDKFYTQEVLQQVKEAFGAKPGDLILILSGDDTMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+E+E ++   H+PFT P+    +L   D  +++A
Sbjct: 410 MGSQLGLRDKNTFACLWVVDFPMFEWSEQENRLMAMHHPFTHPKDEDIALLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H  ++  + F  +G + E  E +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVINGVEVGGGSIRIHDPKLQAKMFEILGFTPEKAEEQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L  G  ++R+   FP + +  D+++ +P+ +   QL EL L
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLDELNL 579


>gi|311110842|ref|ZP_07712239.1| aspartate--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|311065996|gb|EFQ46336.1| aspartate--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 614

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/592 (38%), Positives = 350/592 (59%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N DS     +IA
Sbjct: 4   RTDYAGNITSEYEGQEVNLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGKELMDIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E V+ + G V+ RS  ++N ++ TG++E+ A +I++L+ ++  P  +  +    E
Sbjct: 64  DSLNNEDVIEVKGKVVKRS--SVNPDMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR TL K I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 122 QTRLKYRYLDLRRPTLQKAIMLRSKILKATHEYFDENGFIDIETPILGKSSPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S
Sbjct: 182 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F ++  + +  E +L+ + ++   G  +     RI +D+A+ +YG+DKPD R  + +H++
Sbjct: 241 FTDEKQVQDYTEGLLKKIMKDVM-GIDLKTPIKRITWDEAMNKYGSDKPDTRYEMFIHDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS  ++ + GY V  I  K G    +R   +   ++ +     GLA++ 
Sbjct: 300 SPIFKDSDFKVFSGAIA-DGGY-VKGIAVKNGAKQYSRKKIEEKQDYIKRYHAKGLAWVK 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E G  +  GPV++ L   N EA++   D++ G+   F+A D  K  + + D  R  
Sbjct: 358 Y---EDGEFS--GPVSRFLTDENKEALKKEFDLEGGELVVFVA-DKWKVVTDSLDHLRRE 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GII  N ++F W++D+P +E++E   +   AH+PFTMP      L   D     A
Sbjct: 412 FAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G+
Sbjct: 472 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLLDALDMGFPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR  M+L    N+R+V+ FP + +  + +M +P+ V+ +QL ++G+++
Sbjct: 532 AIGLDRFAMMLAQKDNIRDVTAFPKNASASEPMMHAPAPVADQQLDDIGIKV 583


>gi|256832591|ref|YP_003161318.1| aspartyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686122|gb|ACV09015.1| aspartyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 592

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/597 (39%), Positives = 340/597 (56%), Gaps = 30/597 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  +  G+ V L+GWV R R HGG+ F+D+RD  G+ QVV   +    E+A  
Sbjct: 3   RTHHAGTLTTAHKGNTVTLTGWVDRRRDHGGVAFIDLRDASGVAQVVIRDE----EVAHP 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL + G V  R     N N+ TG+IE+ A ++ +L+ +  LP  V    E  E+I
Sbjct: 59  LRAEYVLQVTGTVEQRPQGNNNPNLPTGEIEVIASQVVVLNESTALPFQVSTALEGTETI 118

Query: 125 ----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R ++R+LDLRR    + +  R+++  + R  +   +F+E  TP LT S+PEGARDF
Sbjct: 119 GEEARLRHRYLDLRRPRPAQLLKLRSQVSQAARRVLDTHDFVEIETPTLTRSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 179 LVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD++   E +L  ++     G  ++    RI Y +A+R+YG+DKPDLR  + + 
Sbjct: 238 MSFVEQDDVIALAEELLANIWALI--GVDLTTPIPRITYHEAMRKYGSDKPDLRFDLEIS 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
            +T++F ++ FRVF           V AI   GG    R   D   EWAR +G  GLAY+
Sbjct: 296 ELTDYFANTTFRVFQAEY-------VGAIVMPGGASQPRRQFDAWQEWARQRGAKGLAYV 348

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              + + G +   GPVAK+L     + +        GD  FF AG   +  S    ARN 
Sbjct: 349 --TIADDGTLG--GPVAKNLTDTERDGLAAATGASPGDCIFFAAGRTDESRSLLGAARNE 404

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQGGMESLKGN 472
           I +  G+I+ + + F W++D P ++   ++  +D         H+ FT P          
Sbjct: 405 IGERTGLIDDDAWAFVWVVDAPLFKPAGQDDDVDLGSSQWTAVHHAFTSPTPEWIDSFDT 464

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D     A+ YD+VCNG EI  G IR H  +V  + F  +GI +E  + +FG L  AFQ G
Sbjct: 465 DPGHALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFQVMGIGEEEAQEKFGFLLDAFQFG 524

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            PPHGGIA G DRIV LL  A ++R+V  FP S    D L  +P+ ++ +Q +E G+
Sbjct: 525 APPHGGIAFGWDRIVALLGRADSIRDVIAFPKSGGGFDPLTAAPAPITEQQRKEAGV 581


>gi|257455401|ref|ZP_05620636.1| aspartyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257447363|gb|EEV22371.1| aspartyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 606

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 241/611 (39%), Positives = 359/611 (58%), Gaps = 29/611 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG +  +     + + GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGLVTENLNDQTITICGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYPE 122
           S RSE+VL I G V  R A T N N+ +GQ+EL A+ IE ++ +E  P P+  E     E
Sbjct: 63  SARSEYVLKITGRVRQRYAGTENKNMTSGQVELLAKDIETIATSETPPFPLNDEFTNVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLD+RR  + + +  R +  +++R  +  + F++  TPILT ++PEGARD+LV
Sbjct: 123 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDQGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVSNGEFYALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  +DI+N  E + + +F+     N   + F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLSDEDIMNIAEGLTKDLFKTMM--NIEFDTFPRMTYAEAMRDYASDKPDLRIPMKLIDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VFS       G  V     +G    R   D   ++    G  GLAYI  +
Sbjct: 300 ADIMQSVEFKVFSGPAQDPKGRVVALRVPQGSDLTRKQIDEYTKFVGIYGAKGLAYI--K 357

Query: 363 LDESGNV-------AGM-GPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
           +++  N+       +G+  P+ K++ + V  E I+ R + Q GD  FF   D  K  +  
Sbjct: 358 VNDVSNINNGVDKESGLQSPIIKNMTDEVLIELIK-RTEAQTGDIIFF-GADKAKVVN-- 413

Query: 414 ADARNHIAQELGI-INCNCFEFC--WIMDFPFYEWNEEEK----KIDFAHNPFTMPQGGM 466
            DA   +  +LG+ +N    E+   W++DFP +E  +       K    H+PFT P+G +
Sbjct: 414 -DAMGALRVKLGLDLNMLTQEWAPLWVVDFPMFEETDSGDGLGGKWTSVHHPFTKPKGTV 472

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
           E++K N   ++ +  YD+V NG EI  G +R +  ++    F  +GIS+   E +F  L 
Sbjct: 473 EAMKNNPETAL-SIAYDMVLNGTEIGGGSLRINTLDMQKAVFEALGISEAEAEEKFSFLL 531

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            A + G PPHGG+A G+DR++ML+ G++++R+V  FP ++     L  +P+ V  +QLRE
Sbjct: 532 NALKYGAPPHGGLAFGLDRLIMLMTGSQSIRDVIAFPKTKTAECPLTEAPAPVDGKQLRE 591

Query: 587 LGLRIVENPKK 597
           LG+RI E   K
Sbjct: 592 LGIRIREKDSK 602


>gi|282852107|ref|ZP_06261465.1| aspartate--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282556867|gb|EFB62471.1| aspartate--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 617

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/592 (38%), Positives = 350/592 (59%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N DS     +IA
Sbjct: 7   RTDYAGNITSEYEGQEVNLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGKELMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E V+ + G V+ RS  ++N ++ TG++E+ A +I++L+ ++  P  +  +    E
Sbjct: 67  DSLNNEDVIEVKGKVVKRS--SVNPDMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR TL K I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPTLQKAIMLRSKILKATHEYFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F ++  + +  E +L+ + ++   G  +     RI +D+A+ +YG+DKPD R  + +H++
Sbjct: 244 FTDEKQVQDYTEGLLKKIMKDVM-GIDLKTPIKRITWDEAMNKYGSDKPDTRYEMFIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS  ++ + GY V  I  K G    +R   +   ++ +     GLA++ 
Sbjct: 303 SPIFKDSDFKVFSGAIA-DGGY-VKGIAVKNGAKQYSRKKIEEKQDYIKRYHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E G  +  GPV++ L   N EA++   D++ G+   F+A D  K  + + D  R  
Sbjct: 361 Y---EDGEFS--GPVSRFLTDENKEALKKEFDLEGGELVVFVA-DKWKVVTDSLDHLRRE 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GII  N ++F W++D+P +E++E   +   AH+PFTMP      L   D     A
Sbjct: 415 FAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G+
Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLLDALDMGFPPHAGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR  M+L    N+R+V+ FP + +  + +M +P+ V+ +QL ++G+++
Sbjct: 535 AIGLDRFAMMLAQKDNIRDVTAFPKNASASEPMMHAPAPVADQQLDDIGIKV 586


>gi|325268075|ref|ZP_08134721.1| aspartate--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324980460|gb|EGC16126.1| aspartate--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 602

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 234/596 (39%), Positives = 349/596 (58%), Gaps = 14/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F +A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +++G+IE+ A++IEIL+ A   P  +  +    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMVSGKIEILAKEIEILNPAATPPF-MIDDENISET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R + R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLQNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++         +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVEL--GDFPRMPYSEAMFYYGSDKPDMRISLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKLSRKEIDEYTQFVGIYGAKGLAYIKVND 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              L    N     P+ K L+  +   I  R   Q+GD  FF A D  K  + A  A R 
Sbjct: 358 VTNLSNGENSGLQSPIVKFLSESSLHEIIKRTGAQNGDIIFFGA-DKAKVVNEAIGALRI 416

Query: 419 HIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            I +E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D  
Sbjct: 417 KIGKEHGADNGYFVDEWKPLWVVDFPMFEYDEENDRWAAMHHPFTSPKPGHEDLMESDPE 476

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           +  A  YD+V NG+EI  G IR H +++  + F+ + I+ E  + +FG L    + G PP
Sbjct: 477 NCLARAYDMVLNGWEIGGGSIRIHRADIQEKVFAALKITPEEQQEKFGFLLDNLKFGAPP 536

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+
Sbjct: 537 HGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELSLRL 592


>gi|304386757|ref|ZP_07369025.1| aspartate--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304339157|gb|EFM05243.1| aspartate--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 602

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/598 (39%), Positives = 354/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|269126362|ref|YP_003299732.1| aspartyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268311320|gb|ACY97694.1| aspartyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 585

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/592 (39%), Positives = 339/592 (57%), Gaps = 22/592 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+ F+D+RD  G+ QVV   +    + A  
Sbjct: 3   RTHGAGVLRKEHAGERVVLAGWVARRRDHGGVTFIDLRDASGVVQVVFREE----DTAHD 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + I G V  R A   N ++ TG+IE++A  IE+LS A  LP P+ G+    E +
Sbjct: 59  LRAEYCVKITGEVRVRPAGNENPDLPTGEIEVAATDIEVLSEAAPLPFPIEGDVNVNEEV 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LD+RR+ + + +  R++    +   M    F+   TP LT S+PEGARDFLVP 
Sbjct: 119 RLKYRYLDIRRERVARALRIRSQAAYLVNEVMREHGFVNVETPTLTRSTPEGARDFLVPV 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF Q+D+EMSFV
Sbjct: 179 RLQPGHWYALPQSPQLFKQLLMVSGLERYYQIARCYRDEDFRADRQP-EFTQIDIEMSFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           E +D++   E ++  +++E   G  V     R+ Y DA+ RYG+DKPDLR    + ++T 
Sbjct: 238 EAEDVMAIGEELVARLWKEIV-GYEVPRPIPRLAYADAMARYGSDKPDLRFGNELVDMTA 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+   GG    R   D   EWARS+G  GLAY+  + 
Sbjct: 297 YFSATPFRVFQAPY-------VGAVVMPGGASQTRKELDAWQEWARSRGARGLAYVLVQP 349

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           D  G +   GPVAK+++      +      + GD+ FF AG P         AR  I + 
Sbjct: 350 D--GTL--TGPVAKNISDAERAGLAKAAGAKPGDAIFFAAGQPHASRELLGAARLEIGRR 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA----HNPFTMPQGGMESLKGNDLLSIKA 479
            G+I+ + + F WI+D P +E   ++          H+PFT P+    +       +  A
Sbjct: 406 CGLIDESAWSFVWIVDPPIFEPECDDSGAQTGWTSVHHPFTAPKPEYAATFHEQPETALA 465

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLVCNG EI  G IR H +E+  + F  +G++KE  E +FG L  AF+ G PPHGGI
Sbjct: 466 DAYDLVCNGMEIGGGSIRIHRAEMQQRVFDVLGLNKEEAEAKFGFLLEAFKYGPPPHGGI 525

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G DR VMLL G +++R+V  FP + +  D L G+P+ ++ +Q +E G+ +
Sbjct: 526 AFGWDRTVMLLAGGESIRDVIAFPKAASGYDPLTGAPTGITEQQRKEAGVDV 577


>gi|296170800|ref|ZP_06852371.1| aspartate--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894536|gb|EFG74274.1| aspartate--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 587

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/596 (39%), Positives = 335/596 (56%), Gaps = 28/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+ G L  SD G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +S     A  
Sbjct: 3   RSHAAGSLRRSDAGQQVTLAGWVARRRDHGGVIFIDLRDASGVAQVVFR-ESDVLAQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R     N  I TG IE++A ++ +L   E  PLP   +    E +
Sbjct: 62  LRAEFCVAVTGVVEVRPEGNANPEIATGDIEVNAAELTVLG--ESAPLPFQLDEPAGEEL 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRRD     +  R+ +  + R  +   +F+E  TP +T S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRRDGPAAALRLRSDVNAAARAVLARHDFVEIETPTITRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 180 RLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +DI+   E +L  ++     G  +     RI Y DA+RR+G+DKPD+R  + +   TE
Sbjct: 239 DAEDIIAISEEILTALWALI--GYRLPTPIPRITYADAMRRFGSDKPDMRFGLELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 297 FFKDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEWAKQRGHRGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G +   GPVAK+L+    + +   +  Q GD  FF AG P    +    AR  IA  
Sbjct: 348 ADDGTLG--GPVAKNLSDAERDGLAAHVGAQPGDCIFFSAGPPKSSRALLGAARGEIAAR 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473
           L +I+ + + F W++D P +E  +E     D A         H+ FT P+   E +   D
Sbjct: 406 LDMIDPDAWAFVWVVDPPLFEPADEATAAGDVAVGSGAWTAVHHAFTSPKPEFEDVVDTD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              + A  YD+VCNG EI  G IR H  ++  + F+ +G+ +   E +FG L  AF  G 
Sbjct: 466 PGRVLADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDRAEAEEKFGFLLEAFTFGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGGIA G DRI  LL    ++REV  FP +    D L  +P+ ++ +Q +E G+
Sbjct: 526 PPHGGIAFGWDRINALLSRVDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESGI 581


>gi|317009370|gb|ADU79950.1| aspartyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 577

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/589 (37%), Positives = 344/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S+ +E A  
Sbjct: 2   RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSSAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENHKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR  + ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLSAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+    G+T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQEIFKAI--GHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F  S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFRDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|25028308|ref|NP_738362.1| aspartyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259507366|ref|ZP_05750266.1| aspartate--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|23493592|dbj|BAC18562.1| putative aspartyl-tRNA synthetase [Corynebacterium efficiens
           YS-314]
 gi|259165077|gb|EEW49631.1| aspartate--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 617

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 244/604 (40%), Positives = 336/604 (55%), Gaps = 31/604 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59
           +H  RTH  G+L   + G  V L+GWV R R HGG+IF+D+RD  GI QVV  N D A  
Sbjct: 16  LHVLRTHLSGELRKENAGQSVTLTGWVARRRDHGGVIFIDLRDRSGIAQVVFRNEDVA-- 73

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FG 116
           E A ++RSE+VL + G+V  R   + N N+ +G +E+S     +L+ +  LP  +     
Sbjct: 74  ERAHALRSEFVLQVTGVVEKRPEGSENPNLASGDVEVSVTDFTVLNESAPLPFQIEDASS 133

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             E  E  R KYR+LDLRR      +  R+    + R  + + +F E  TP LT S+PEG
Sbjct: 134 AGEVGEETRLKYRYLDLRRPVQANALRLRSAANKAARTVLDSHDFTEIETPTLTRSTPEG 193

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDFLVP+R+  G+FYALPQ+PQ +KQLL  +G +RY+QIA C+RDED R+DR P EF Q
Sbjct: 194 ARDFLVPARLKPGTFYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQP-EFTQ 252

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+EMSFV+Q+D++   E +L  V++    G  +S    RI Y DA+R YG+DKPDLR  
Sbjct: 253 LDVEMSFVDQEDVIALAEEILTEVWKLI--GYEISTPIPRITYADAMRLYGSDKPDLRFD 310

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPG 355
           I +   T+ F  + FRVF           V A+  KGG    R   D   EWA+ +G  G
Sbjct: 311 IQITECTDFFADTTFRVFKNEY-------VGAVVMKGGASQPRRQLDAWQEWAKQRGAKG 363

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI   + E G +   GPVAK++     E I   +  + GD  FF AGD     +    
Sbjct: 364 LAYIL--VGEDGELG--GPVAKNITDAEREGIAAHVGAEPGDCIFFAAGDTRSSRALLGA 419

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGG 465
           AR+ IA++L +I    + F W++D P +E   +            K    H+ FT P+  
Sbjct: 420 ARDEIARKLDLIRDGEWSFVWVVDAPMFESAADATASGDVALGNSKWTAVHHAFTSPKPE 479

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
                  +     A+ YD+VCNG EI  G IR H  +V  + F  +GIS+E   ++FG L
Sbjct: 480 FLDTFDENPGEALAYAYDIVCNGNEIGGGSIRIHQRDVQERVFKVMGISEEEARDKFGFL 539

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             AF  G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ ++  Q +
Sbjct: 540 LDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPITPLQRK 599

Query: 586 ELGL 589
           E G+
Sbjct: 600 ESGI 603


>gi|160915139|ref|ZP_02077352.1| hypothetical protein EUBDOL_01147 [Eubacterium dolichum DSM 3991]
 gi|158432938|gb|EDP11227.1| hypothetical protein EUBDOL_01147 [Eubacterium dolichum DSM 3991]
          Length = 580

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 223/587 (37%), Positives = 339/587 (57%), Gaps = 12/587 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L +SDV   V L GWV + R  G ++F+D+RD  GITQ+V +  S+  E  K 
Sbjct: 3   RTHTNGELRLSDVNKKVTLLGWVAKRRNFGSLVFIDLRDRSGITQLVFDETSS--EAIKE 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E++L ++G V  R  +  N N+ TG+IE+   K+EI++ A+  PL +  E +  E  
Sbjct: 61  VRNEYILEVEGTVHERKDK--NPNLETGEIEVVVDKVEIINSAKTTPLIIADETDALEDT 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  + K ++ R  I  S+R  +    F+E  TP+L  S+PEGARD+LVPS
Sbjct: 119 RLKYRYLDLRRPIMQKKLLMRHAITKSLRGYLDDHGFVEIETPVLGKSTPEGARDYLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ G FYALPQ+PQ +KQLLM SGF+RY+Q A CFRDED R+DR   +F QLDMEMSF+
Sbjct: 179 RVHPGCFYALPQSPQLFKQLLMISGFERYYQFARCFRDEDLRADR-QTDFTQLDMEMSFL 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              +I   ME +L  + ++   G  +   FLR+ Y++A+ RYG+DKPD R  + +  +T+
Sbjct: 238 SDVEIQTMMEEMLAKLMKDV-KGLDIPTPFLRLSYEEAMNRYGSDKPDNRFGMELQEITD 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F    F+VF   ++     +   +P K     R   D++ E A+  G  GL  + +  +
Sbjct: 297 IFTDCGFQVFKDCIAKGGSIKAVVVPDK-ADMTRKEIDKITELAKKNGAKGLVTLKYMHE 355

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E       G + K L      A++  L +++ D    ++      C+     RNH    L
Sbjct: 356 EIS-----GSIVKFLTEKELNALKETLALKENDLILIVSDAWETTCNVLGALRNHFGTVL 410

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G+   + F F W+ DFP +E++EE+ +    H+PFT P+         D   + A  YD+
Sbjct: 411 GLKKKDEFSFLWVTDFPMFEYSEEDGRYYAKHHPFTRPKQEDMKYIDEDPSKVHAIAYDV 470

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG+E+  G +R + S++  + F  +G ++E +  RFG    AFQ G PPHGG+A G+D
Sbjct: 471 VLNGYELGGGSLRIYDSKMQEKMFEVMGFTEEQIHERFGFFVDAFQYGTPPHGGLAFGLD 530

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           RI M+L  + ++R+V  FP + N    +  +P+ V  +QL EL ++I
Sbjct: 531 RIAMILSESDSIRDVIAFPKNANAKCPMSDAPTPVDPQQLEELHIKI 577


>gi|46907747|ref|YP_014136.1| aspartyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|62287573|sp|Q71ZF1|SYD_LISMF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|46881016|gb|AAT04313.1| aspartyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
          Length = 591

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/594 (39%), Positives = 340/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGTVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I    E++L  V +E  N  T+   F R+ Y +A+ R+G+DKPD+R  + + NV
Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELVNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++     +F+VF    ++  G EV AI AK      +R   D +  +  + G  GLA   
Sbjct: 302 SDVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E+G +   GP+AK         ++  L  +DGD   F A       +     RN +
Sbjct: 357 WLKVEAGELK--GPIAKFFPEEKATELKASLQAEDGDLLLFAADKADIVAASLGALRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A 
Sbjct: 415 GKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA
Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+ 
Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKK 588


>gi|325202727|gb|ADY98181.1| aspartyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325208723|gb|ADZ04175.1| aspartyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 602

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/598 (39%), Positives = 354/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGTKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGA-DKTKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|302342313|ref|YP_003806842.1| aspartyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638926|gb|ADK84248.1| aspartyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 595

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 226/590 (38%), Positives = 334/590 (56%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG L  +DVG  V L GW  R R HGG+IF+D+RD  G+TQVV NP+       +A
Sbjct: 11  RTHTCGQLTAADVGKQVVLMGWCQRRRDHGGLIFVDLRDRDGLTQVVFNPEVSGGSHSLA 70

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++R+E+ L + G V  R     N  + TG +E+     EIL+ ++  P  +    +  E
Sbjct: 71  HAIRNEYCLALQGKVDLRPEGMQNDKLGTGAVEVYVSDFEILNASKTPPFMLEDWIDVGE 130

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + +N+  R +   + R  +  + F+E  TP LT S+PEGARD+LV
Sbjct: 131 AVRLKYRYLDLRRQVVFRNLKLRHQAAQAARGYLNDQGFLEVETPFLTKSTPEGARDYLV 190

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV +G FYALPQ+PQ +KQLLM  G +RY+QI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 191 PSRVQRGRFYALPQSPQLFKQLLMVGGVERYYQIVKCFRDEDLRADRQP-EFTQVDLEMS 249

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++D+++  E ++  + +  +          R+ Y  A+ R+G D PD+R  + + ++
Sbjct: 250 FVDENDVMDLTEGLVGAILK--ATRGVELGPVPRLSYAQAMERFGLDAPDIRFGLELTDL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            E    ++F+VF    +++ G  V AI  KG GG +R   D +  +    G  GLA++  
Sbjct: 308 GELMQKTQFKVFRG--AIDGGGVVKAINGKGMGGLSRKDLDDLTAFVADYGAKGLAWV-- 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +L + G      P+AK +      AI  R+  +DGD  FF A             R  ++
Sbjct: 364 KLKDGGQW--QSPIAKFIEPEVQAAINERMAAEDGDILFFGADKKPVVSESLGRLRLELS 421

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   + + +   FCW+ DFP +E++ +EK+ +  H+PFT P+   E   G+D  +  A  
Sbjct: 422 RRFQLTSPDDLRFCWVTDFPMFEYDPQEKRYNAMHHPFTSPKSEFEDKMGSDPEACLARA 481

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR H  E   + F  + I  E    +FG L  A   G PPHGG+A 
Sbjct: 482 YDLVLNGSEVGGGSIRIHRPETQAKVFGALNIDDEQAREKFGFLLDALAFGAPPHGGLAL 541

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR+V +L G  ++REV  FP +Q     +  +PSTV   QL ELGLR+
Sbjct: 542 GFDRLVAILAGQGSIREVIAFPKTQKASCPMTDAPSTVDRNQLLELGLRV 591


>gi|254775890|ref|ZP_05217406.1| aspartyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 591

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 239/599 (39%), Positives = 335/599 (55%), Gaps = 30/599 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63
           R+H+ G L  SD G  V L+GWV R R HGG+IF+D+RD  GITQVV  +PD    + A 
Sbjct: 3   RSHAAGSLRSSDAGQQVTLAGWVARRRDHGGVIFIDLRDASGITQVVFRDPD--VLKQAH 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + GLV  R     N  I TG IE++A  + +L   E  PLP   +    E 
Sbjct: 61  RLRAEFCVAVTGLVEIRPEGNANPEIATGDIEVNASSLTVLG--ESAPLPFQLDEPAGEE 118

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRRD     I  R+++  + R  +   +F+E  TP +T S+PEGARDFLVP
Sbjct: 119 LRLKYRYLDLRRDAPAAAIRLRSKVNAAAREVLARHDFVEIETPTITRSTPEGARDFLVP 178

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSF
Sbjct: 179 ARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSF 237

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+ +D++   E +L  ++     G  +     RI Y DA+ RYG+DKPDLR  + +   +
Sbjct: 238 VDAEDVIAISEEILAALWALI--GYEIPRPIPRISYADAMARYGSDKPDLRFGLELVECS 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWR 362
           E F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   
Sbjct: 296 EFFKDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEWAKQRGAKGLAYVL-- 346

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G +   GPVAK+L+      +   +    GD  FF AG      +    AR+ IA 
Sbjct: 347 VGEDGELG--GPVAKNLSDAERAGLAGHVGAAPGDCIFFAAGPAKPSRALLGAARSEIAH 404

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGN 472
            LG+I+   + F W++D P +E  ++     D A         H+ FT P+ G E     
Sbjct: 405 RLGLIDPQAWAFVWVVDPPLFEPADDATAAGDVAVGSGAWTAVHHAFTAPKPGYEDAIET 464

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D  ++ A  YD+VCNG EI  G IR H  ++  + F+ +G+       +FG L  AF  G
Sbjct: 465 DTGNVLADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDHAEAREKFGFLLEAFTFG 524

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            PPHGGIA G DRI  LL    ++REV  FP +    D L  +P+ ++ +Q +E G+ +
Sbjct: 525 APPHGGIAFGWDRINALLSRVDSIREVIAFPKTGGGVDPLTDAPAPITEQQRKESGIDV 583


>gi|261379281|ref|ZP_05983854.1| aspartate--tRNA ligase [Neisseria subflava NJ9703]
 gi|284797715|gb|EFC53062.1| aspartate--tRNA ligase [Neisseria subflava NJ9703]
          Length = 602

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/596 (39%), Positives = 348/596 (58%), Gaps = 14/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPAMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYIKVND 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              L    N     P+ K L+    + I  R   Q+GD  FF A D  K  + A  A R 
Sbjct: 358 VSNLSNGENSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGALRI 416

Query: 419 HIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D  
Sbjct: 417 KVGLEHGKDNGYFVDEWKPLWVVDFPMFEYDEEANRYVAVHHPFTAPKEGHEDLMVSDPA 476

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G PP
Sbjct: 477 NCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAPP 536

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+
Sbjct: 537 HGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNVVDDKQLRELSLRL 592


>gi|299135514|ref|ZP_07028698.1| aspartyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298601638|gb|EFI57792.1| aspartyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 618

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 247/614 (40%), Positives = 354/614 (57%), Gaps = 35/614 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG+L  SD G+ V L GWV+R R HG +IFLD+RD  GITQ+V + +++      A
Sbjct: 11  RTHMCGELRSSDAGTTVTLMGWVNRRRDHGNLIFLDVRDRTGITQIVLDKEASPEAHAKA 70

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++ R E+V+ + G V  R     N N++TG IE+   ++ +L+ A+  P     +    E
Sbjct: 71  EAARPEYVVAVTGKVRVRGQGLANPNMVTGDIEVVGNELLLLNEAKTPPFSPAEDAIANE 130

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + KN   R+R+  ++R  ++ + F+E  TP +T S+PEGARD+LV
Sbjct: 131 EVRLKYRYLDLRRVEMQKNFAVRSRVAMAIRNFLVEQGFLEIETPFMTRSTPEGARDYLV 190

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQ+LM SGFD+YFQIA CFRDED R+DR P EF Q+D+EM+
Sbjct: 191 PSRVHPGHFYALPQSPQIFKQILMISGFDKYFQIARCFRDEDLRADRQP-EFTQIDLEMT 249

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           F  Q+ I   +E  L+  F+  + G  + N  F+++ YD AI RYG DKPD+R P ++  
Sbjct: 250 FPRQETIFRVVEGFLQTAFK--AAGIELGNQQFVQMTYDQAIARYGIDKPDMRLPAMVDL 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEV--WAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             E  + +E R   + L V+P   V  + IP  G     A    +NE   S G  GL ++
Sbjct: 308 SAE--LTAELR---ETLKVDPTLPVLGFTIPRVGELSGTARKALVNEIRGSFGDCGLDFL 362

Query: 360 ---FWRLDESGNVAGMGPVAKHL--NIV------NTEAIRVRLDMQDGDSCFFIAGDPLK 408
                R +E+         AK     IV       TE + V +  + G    +   DP  
Sbjct: 363 DVSRLRTNEAFVPLAEAIAAKLTAEQIVFNGENFTTEDLAVVITPKPGTPAKW-NHDPQW 421

Query: 409 FCSFAADARNHIAQEL----GII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
                   R  +A++     G+         F+F W+ DFP YEWNEE K  D AH+PFT
Sbjct: 422 IWKRVGALRLELAKKYADKHGLFTQTGTAADFKFLWVTDFPMYEWNEEAKTWDAAHHPFT 481

Query: 461 MP-QGGMESLK-GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
            P +  + S +  ND  +++A  YD+V NG E+ SG IR H  +V  + F ++G++ E  
Sbjct: 482 SPHEDDITSGRLVNDKGAVRALAYDIVLNGTELGSGSIRIHRQDVQAEIFRSLGMTDEEA 541

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
           + RFG    A + G PPHGGIA G+DRIVM+L GA ++REV  FP +    DL++ +P+ 
Sbjct: 542 KARFGFFLDALEYGTPPHGGIALGLDRIVMILAGASSLREVIAFPKTAKAIDLMVDAPTP 601

Query: 579 VSVEQLRELGLRIV 592
           VS +Q+REL LR V
Sbjct: 602 VSEQQMRELSLRTV 615


>gi|311748783|ref|ZP_07722568.1| aspartate--tRNA ligase [Algoriphagus sp. PR1]
 gi|126577319|gb|EAZ81567.1| aspartate--tRNA ligase [Algoriphagus sp. PR1]
          Length = 584

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 232/594 (39%), Positives = 345/594 (58%), Gaps = 23/594 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH+CG+L +  V   V LSGWV RVR  GG++++D+RD YGITQ++    + D A  E 
Sbjct: 3   RTHTCGELRLDHVNQEVTLSGWVQRVRNKGGLVWVDLRDRYGITQLIFEEGSTDKALLEK 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+   G V+ R+++  N  I TG IE+ A  +++L+ A+  P  +  + +  
Sbjct: 63  AAELGREFVVQATGTVIERTSK--NDKIPTGSIEIKATDLQVLNAAKVPPFIIEDDTDGG 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR+ + + +  R R++   R  M AE+F+E  TP+L  S+PEGARDF+
Sbjct: 121 EELRMKYRYLDLRRNVVREKLHLRHRMMQETRKYMDAEHFMEVETPVLIKSTPEGARDFV 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 181 VPSRVNPGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +FVEQ+DIL+T E + + +   F+N   V      R+ Y DA++ YG DKPDLR  +   
Sbjct: 240 AFVEQEDILSTFEGLTKHL---FANVKGVELEEVKRMTYADAMKYYGNDKPDLRFDMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357
            + E      F +F      +    V  I AKG     R   D + +W +    G  G+ 
Sbjct: 297 ELNELAQGKGFGIF------DNAELVVGICAKGAAEYTRKQLDAITDWVKRPQIGAKGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y  +  D  G +     V K  +  + +A     + + GD    ++GD  K     ++ R
Sbjct: 351 YAKYNAD--GTIKST--VDKFYSQEDLQAWASAFEAEPGDLMLILSGDANKVRKQLSELR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + ++LG+ + N F+  W++DFP  EW+EE ++    H+PFT P+     L  +D  ++
Sbjct: 407 LKMGEDLGLRDRNVFKPLWVVDFPLLEWDEETERYHAMHHPFTSPKKEDIPLLDSDPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG EI  G IR H        F ++G + E  + +FG L  AF+ G PPHG
Sbjct: 467 RANAYDLVINGVEIGGGSIRIHDRATQQLMFKHLGFTDEEAQKQFGFLMEAFEYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G DR+  +  G+ ++R+   FP + +  D+++ SPS+++ EQL EL +++
Sbjct: 527 GIAFGFDRLCAIFGGSDSIRDYIAFPKNNSGRDVMIDSPSSIAPEQLGELSIQL 580


>gi|317968273|ref|ZP_07969663.1| aspartyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 607

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 231/604 (38%), Positives = 345/604 (57%), Gaps = 30/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R+H CGDL  S  G  V+L GWV R R HGG+IF+D+RD  G  Q+  +PD+    F +A
Sbjct: 2   RSHGCGDLRQSATGQAVQLCGWVDRSRDHGGVIFIDLRDRSGTVQITVDPDNGAEMFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELP--LPVFGERE 119
           + +R+E V+ ++G V  R A+ IN  + TGQIE+ A  I +L SV   LP  + V  E  
Sbjct: 62  EHLRNETVIQVEGKVRERPADAINDKLSTGQIEVLASSIRVLNSVKGNLPFAVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR+ ++ N+  R + I + R  +  + FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRERMNSNLRLRAQTIQTARRFLEEQGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLDM
Sbjct: 182 YILPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q+ IL   E+++  +++    G  +   F R+ + +A+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQEQILELNESLIAAIWKSV-KGIELPRPFPRLTWHEAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351
            NV++      F+VFS  ++     +  A+P    GGN A          D  +E A+  
Sbjct: 300 VNVSDLVADMGFKVFSGAVASGGSVKCIAVP----GGNDAVSNVRIKPGGDVFSE-AQKA 354

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLA+I  R+ E G +  +G +  +L+      +  R   + G    F AGD      
Sbjct: 355 GAGGLAFI--RVREGGEIDTIGAIKDNLSDEKKAELLKRTGAEPGTLILFGAGDTATVNK 412

Query: 412 FAADARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ---- 463
                R ++A+ELG++      + + F W++DFP +E+N +E + +  H+PF  P     
Sbjct: 413 ALDRVRQYLARELGMVKADGENDSWNFLWVVDFPMFEFNADENRYEALHHPFCAPNTDDL 472

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
           G   +     L   +A  YDLV NG E+  G +R H S +  Q    VG+  E    +FG
Sbjct: 473 GSDPAAWAETLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLETVGLPLEEANAQFG 532

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            L  A   G PPHGG+A G+DR+VMLL G +++R+   FP +Q    L+  +P  V+ +Q
Sbjct: 533 FLMEALDMGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFPKTQQARCLMTSAPGGVAEKQ 592

Query: 584 LREL 587
           L EL
Sbjct: 593 LEEL 596


>gi|109947388|ref|YP_664616.1| aspartyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|122973325|sp|Q17XK9|SYD_HELAH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|109714609|emb|CAJ99617.1| aspS [Helicobacter acinonychis str. Sheeba]
          Length = 584

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/589 (37%), Positives = 341/589 (57%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   D+   V+++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEVSEKDIDKIVKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++LR +F+    G+T+   F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLREIFKAI--GHTIPTPFKRMPYKEAMENYGSDKPDLRFELPLVEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I   +    + A+  KG     +R+    + E+    G  GLAY+  +
Sbjct: 298 CFMDSSNSIFSNIAKDSKNKRIKALNVKGADATFSRSVLKELEEFVHQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E       GP+ K L+    + I  R + Q GD  FF AGD      +    R  +A+
Sbjct: 358 EYEIK-----GPLVKFLSEKGLKNILERTNAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ N + F W+++FP +E  + E     AH+PFTMP+             I+A+ Y
Sbjct: 413 MLDLIDKNAWNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAYAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I ++  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFERINIHEDEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS +S EQLREL +R+
Sbjct: 527 FDRLIMLMTQSNSIRDVIAFPKTQKASCLLTNAPSPISEEQLRELHIRL 575


>gi|153810160|ref|ZP_01962828.1| hypothetical protein RUMOBE_00541 [Ruminococcus obeum ATCC 29174]
 gi|149833339|gb|EDM88420.1| hypothetical protein RUMOBE_00541 [Ruminococcus obeum ATCC 29174]
          Length = 600

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/591 (39%), Positives = 351/591 (59%), Gaps = 14/591 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60
           +RT  C ++    VGS V L GWV + R  GG++F+D+RD  GI QV+    + D   FE
Sbjct: 9   HRTCRCAEVTKDMVGSKVTLMGWVQKARNKGGLVFVDLRDRSGIMQVIFENGSIDQEGFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ + G V +R    +N N+ TG +EL A+ + IL+ +E  P P+    + 
Sbjct: 69  KAGKLRSEFVIAVTGTVENRGG-AVNENLATGALELRAESLRILAESEVPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  L +N++ +++++   R     E F+E  TP+L  S+PEGARD+
Sbjct: 128 KDEIRLKYRYLDLRRPDLQRNLMMKSKVMMLTRKFFTDEGFLEVETPMLGKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ GSFY LPQ+PQ YKQLLM SG+DRY QIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRIHPGSFYGLPQSPQLYKQLLMCSGYDRYIQIARCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E  L  +F+E  + + V     RI + +A+ R+G+DKPD+R  + +H
Sbjct: 247 LSFVDVDDVIDVNERFLAYLFKEVLDVD-VKLPIQRITWQEAMDRFGSDKPDMRFGMELH 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           +V+E      F VF   L    G  V  I A+G G   R   D++ ++A++ G  GLAYI
Sbjct: 306 DVSEVVKDCGFVVFKNALEA--GGSVRGINAEGQGSMPRKKIDKLVDFAKTYGAKGLAYI 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              + E G        AK +     +A+   ++ + GD   F A             R  
Sbjct: 364 --AIAEDGTRK--SSFAKFMTEEEMDALVQAMEGKPGDLLLFAADKNKVVYDVLGALRVE 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLKGNDLLSIK 478
           +A+++ +++ N + F W+ +FP  EW+EEE +    H+PFTM  +  +  ++  DL  I+
Sbjct: 420 LAKQMDLLDKNEYRFVWVTEFPLLEWSEEENRYTAMHHPFTMLMEEDIPLIESGDLGKIR 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG EI  G +R H +++  + F  +G +K+    +FG L  AF+ G+PPH G
Sbjct: 480 AKAYDIVLNGNEIGGGSVRIHQNDIQEKMFEMLGFTKDAAYKQFGFLLNAFKYGVPPHAG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           +A G+DR+VML+    ++R+V  FP  ++   L+  SPS VS +QL ELGL
Sbjct: 540 LAYGLDRLVMLMAKVDSIRDVIAFPKVKDASCLMTESPSVVSEQQLEELGL 590


>gi|317181930|dbj|BAJ59714.1| aspartyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 577

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 221/589 (37%), Positives = 342/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DV   ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVDKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYERALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +  + R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALTARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+    G+ +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHNISKPFKRMSYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADTIFSRSVLKELEEFVRQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  + D + GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTDAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|330444099|ref|YP_004377085.1| aspartyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807209|gb|AEB41382.1| aspartyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 584

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 229/593 (38%), Positives = 339/593 (57%), Gaps = 14/593 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           RYRTH C +L +  +G  VRLSGWVHR R HGG++F+D+RD YGITQ+V   +  +    
Sbjct: 2   RYRTHHCNELSLDHLGEQVRLSGWVHRYRNHGGVVFIDLRDRYGITQIVCREEDNADLHR 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
              +VRSEWVL ++G V +R +   N N+ TG+IE+   ++++LS ++ LP  +  E   
Sbjct: 62  RLDAVRSEWVLAVEGKVCARLSGMENLNLATGKIEVEIHQLQVLSKSQNLPFSIADEHIH 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LD+RR  +   ++ R +++ + R  M ++ FIE  TP+L  S+PEGARD
Sbjct: 122 VNEELRLQYRYLDMRRGEILDRLICRHQVMLACRSYMHSQGFIEVVTPVLGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  G FYALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D+
Sbjct: 182 YLVPSRIYPGKFYALPQSPQLFKQLLMIGGLDRYFQIATCFRDEDLRADRQP-EFAQIDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF +  D+   +E ++  +F     G  +S    R+ Y DA   YGTDKPDLR  + +
Sbjct: 241 EMSFGDPQDLFPIIEELIVELFA--VKGIKISLPLPRMTYQDAKDFYGTDKPDLRFDLRL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +  +H     F +F   L+     + + +P  G   +R   D   E+ +  G  GL   
Sbjct: 299 KDCRKHAERFSFSIFLDQLAQGGKIKGFCVPG-GADISRKQLDIYTEFVKRYGAMGLV-- 355

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            W   + G ++    VAK  +     A+    + +D D    IA             R  
Sbjct: 356 -WIKKQEGGIS--SNVAKFASEEVFNAMFEEFEAKDQDMLLLIAAQESVANQALDHLRRR 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+E  + +   + F WI DFP +    E+ ++   H+PFT P      L  +  LS+++
Sbjct: 413 IAKERQLYDETQYNFVWITDFPLFSL--EDGQLSSEHHPFTAPLEEDIPLLEDSPLSVRS 470

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+EIASG  R H +++  + F+ + +S E ++ +FG    A   G PPH GI
Sbjct: 471 SSYDLVLNGYEIASGSQRIHNADLQSKIFTLLKMSPESIKEKFGFFIEALSFGTPPHLGI 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DRIVM+L  A+ +REV  FP +Q   DL+M +PS +   QL+EL +++ 
Sbjct: 531 ALGLDRIVMVLTQAEGIREVIAFPKTQKAADLMMEAPSEIMTSQLKELHIKVT 583


>gi|313682127|ref|YP_004059865.1| aspartate--tRNA(asn) ligase [Sulfuricurvum kujiense DSM 16994]
 gi|313154987|gb|ADR33665.1| aspartate--tRNA(Asn) ligase [Sulfuricurvum kujiense DSM 16994]
          Length = 584

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/603 (39%), Positives = 352/603 (58%), Gaps = 31/603 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           R+H C DL  ++VG  V L GW +  R HGGI+F+D+RD  G+ Q+V +P  ++   ++A
Sbjct: 2   RSHFCTDLSEANVGDNVILCGWANSYRDHGGIVFIDLRDKSGLIQLVCDPADNAHAHKLA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL   G V +R    +N  + TG IE+  +++ I + +E +P  + G+    E
Sbjct: 62  SEVRDEFVLIAHGRVRNRGEGLVNPRLKTGAIEVVVEELIIENRSEPVPFGI-GDNSVGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLR  +++   + R++   + R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 121 EIRLKYRYLDLRNPSMYNTFMLRSKAAIAARNVLDRLGFLEVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQ+PQ +KQLLM  GFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHEGEFYALPQSPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+D++   E ++ G+F   + G+ V   F RI Y+DA+  YG+DKPDLR  + M +V
Sbjct: 240 FCNQEDVIRVAEELITGMFA--AAGHEVHTPFNRIKYNDAMEWYGSDKPDLRYDLKMIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGY---EVWAIPAKGGGGNRAFCDR----MNEWARSQGQPG 355
            + F   +  +F+ I + NP     +   +P    G +  F  R      ++ R  G  G
Sbjct: 298 IDIFARCDNEIFTSI-AANPKMNRIKALRVP----GADLVFSKREMKSFEDYVRKFGAKG 352

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y  +++ E G     GP+ K     + + +  R  M+ GD  FF AGD      +   
Sbjct: 353 LGY--FQMKEDGL---KGPLEKFFAPEDLQLLVERTGMEVGDVVFFGAGDKKTVWDYMGR 407

Query: 416 ARNHIA--QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            R  IA  +++ +I+ + FEF W++DFP +E   E+ ++   H+PFTMP+     L    
Sbjct: 408 FRIFIAEHEKMNLIDQDRFEFVWVVDFPMFEI--EDGRVKALHHPFTMPR----DLNHEH 461

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           L  I++  YD+V NG E+  G IR H   +  Q F+ +GI +E  + +FG L  A + G 
Sbjct: 462 LEDIESIAYDIVLNGTELGGGSIRIHKQALQEQIFTLLGIGEEEAQEKFGFLLDALKFGA 521

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGG A G DR +MLL   +++R+V  FP +Q    ++  +PS V + QLREL +R+ E
Sbjct: 522 PPHGGFAIGFDRFMMLLSKKESIRDVIAFPKTQKASCIMTQAPSPVELTQLRELHIRLRE 581

Query: 594 NPK 596
           + K
Sbjct: 582 SVK 584


>gi|325846752|ref|ZP_08169667.1| aspartate--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481510|gb|EGC84551.1| aspartate--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 585

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/599 (38%), Positives = 351/599 (58%), Gaps = 20/599 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           M   R+H CG+L   ++G  V L GWV + R  G ++F+D+RD  GITQ+V    DS  +
Sbjct: 1   MEFKRSHMCGELREENIGEEVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVTREEDSENY 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  K V SE+VL + G V  R  E+ N  I TG IE+ A+KI IL  A+  P+ +  + +
Sbjct: 61  KTVKDVASEYVLEVKGEV--RERESKNPEIPTGNIEIVAEKINILDKAKTPPIYIKDDDD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+++ KYR+LD+R+ ++ KN+  R+ I+  MR  M    F E  TP LT  +PEGARD
Sbjct: 119 VSENLKLKYRYLDMRKQSVQKNLKLRSDIVRCMREYMYDNKFTEVETPFLTKPTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVNQG FYALPQ+PQ  KQLLM    DRYFQI  CFRDED R++R P EF QLD+
Sbjct: 179 YLVPSRVNQGKFYALPQSPQLMKQLLMIGSLDRYFQIVKCFRDEDLRANRQP-EFTQLDI 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E+SF +QDD++   E +L+ +F+ F++ + +     R+ Y +A+  YG+DKPDLR    +
Sbjct: 238 ELSFADQDDVIKVNEGLLKKLFDTFTDYD-LQLPIPRMDYSEAMNSYGSDKPDLRYGYKI 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLA 357
           ++++E F  S+F+VF+   ++  G+ V AI   G   N  R   D++ ++ +  G  GL+
Sbjct: 297 NDISEIFKGSDFKVFTD--NIKEGHSVRAINFTGQASNYSRKQLDKLTDFVKDYGLKGLS 354

Query: 358 YIFWRLDESGNVAGMGPVAKHL--NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +I +  D   N +    + K L  +I+N   ++ +LD++D D    IA D  K       
Sbjct: 355 FIKFNSDNDINSS----IKKFLTDDIINN--LKEKLDIKDND-LVLIAADKNKTVLEGLG 407

Query: 416 A-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           A R  +A++  +     + FCW+++FP +E++EEE +    H+PFTMP      L   + 
Sbjct: 408 ALRRKVAKDQNLYEKE-YAFCWVVNFPMFEYSEEEDRYVSQHHPFTMPNEEDVDLLLTEP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++   YD+V NG E+  G +R +  E+  + F  + +S E ++ +FG    A Q G P
Sbjct: 467 EKVRTQAYDIVINGDEMGGGSVRINNQELQEKVFKALKLSDEDIKQKFGFFIEALQYGTP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PH G+A G+DR+VML     N++++  FP +Q+    L  +PS V  + L EL + + E
Sbjct: 527 PHAGLAYGLDRMVMLFAKTDNIKDIIAFPKTQSATCPLTQAPSIVDEKSLSELSIEVKE 585


>gi|300361854|ref|ZP_07058031.1| aspartate--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354473|gb|EFJ70344.1| aspartate--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 617

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/592 (38%), Positives = 350/592 (59%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N DS     +IA
Sbjct: 7   RTDYAGNITSKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGKELMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E V+ + G V+ RS  ++N ++ TG++E+ A +I+IL+ ++  P  +  +    E
Sbjct: 67  DSLNNEDVIEVKGKVVKRS--SVNPDMKTGEVEVDATEIDILNKSKVPPFEIKDDINAAE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR TL K I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPTLQKAIMLRSKILKATHEYFDEHGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F ++  + +  E +L+ + ++   G  +     RI +++A+ +YG+DKPD R  + +H++
Sbjct: 244 FTDEKQVQDYTEGLLKKIMKDVM-GIDLKTPIKRITWNEAMNKYGSDKPDTRYEMFIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS  ++ + GY V  I  K G    +R   +   ++ +     GLA++ 
Sbjct: 303 SPIFKDSDFKVFSGAIA-DGGY-VKGIAVKNGAKQYSRKKIEEKQDYIKRYHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E G  +  GPV++ L   N EA++   D++ G+   F+A D  K  + + D  R  
Sbjct: 361 Y---EDGEFS--GPVSRFLTDENKEALKKEFDLEGGELVVFVA-DKWKVVTDSLDHLRRE 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GII  N ++F W++D+P +E++E   +   AH+PFTMP      L   D     A
Sbjct: 415 FAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G+
Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLLDALDMGFPPHAGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR  M+L    N+R+V+ FP + +  + +M +P+ V+ +QL ++G+++
Sbjct: 535 AIGLDRFAMMLAQKDNIRDVTAFPKNASASEPMMHAPAPVADQQLDDIGIKV 586


>gi|50365182|ref|YP_053607.1| aspartyl-tRNA synthetase [Mesoplasma florum L1]
 gi|62287554|sp|Q6F1A0|SYD_MESFL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|50363738|gb|AAT75723.1| aspartyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 577

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/594 (37%), Positives = 348/594 (58%), Gaps = 24/594 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+C  L +S+V   V L GW+ ++R  G I F+D+RD YGITQ+V   +    E+  +
Sbjct: 3   RTHNCNQLNISNVNQEVTLKGWIKKIRKMGQITFIDLRDFYGITQIVVGENKQ--ELINN 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           ++ E+V+ I G V+ R ++  NA+I TG+IE+  + IE+++ +E  P  +  + E  E  
Sbjct: 61  LKPEYVISITGKVIERKSK--NADIPTGEIEIEVKNIELINKSELTPFVIENDVEVSEET 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  YR+LDLRR  +  N++ R ++ + +R    A+NF+E  TP    S+PEGARDFLVPS
Sbjct: 119 RMSYRYLDLRRQKIQNNMLLRAKVNSIIRKEFEADNFVEVETPYFGKSTPEGARDFLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+N+ +FYALPQ+PQ YKQLLM SGFD+Y+QI  CFRDED R+DR P EF QLDMEMSF 
Sbjct: 179 RLNKNTFYALPQSPQLYKQLLMVSGFDKYYQIVRCFRDEDLRNDRQP-EFTQLDMEMSFA 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              ++ + +E V++ +F E   G       +++ + +AI  YG+DKPD+R  + ++ + E
Sbjct: 238 SATEVQDQIEKVIKKIFLEVK-GIDFKEKLIKMPFREAIDLYGSDKPDIRFDLKINTLNE 296

Query: 305 HFVHSEFRVFSKI----LSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            F  ++ ++F       LS+  G  V  + +K         + + E A+ +    LA+  
Sbjct: 297 IFDKTQIKLFESFKENKLSIR-GICVEELLSKKQ------LEILTETAKQKSFNNLAFAK 349

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E+G  +  G +A  L+    +A+  + +++D  +     G   K        RN +
Sbjct: 350 F---ENGTWS--GSIASSLSDGEKQALIKQFNIKDKATILLNVGKYEKISDMLGAVRNKV 404

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKA 479
           A+ L + + N ++  WI+DFP YEW++EE +   AHNPFTMP    ++  + N   +I A
Sbjct: 405 AEILNLADPNDYKLLWIIDFPLYEWSDEESRYVAAHNPFTMPNIKSIDDFETNKEDAI-A 463

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NGFE+ SGG+R   S +  + F  VG+  E +E  FG    A++ G P H G 
Sbjct: 464 DSYDLVLNGFELGSGGVRITDSGIQQRMFEAVGLDDETIEKNFGWFINAYKYGAPNHAGF 523

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A GIDR++MLL  ++++R+V  FP +    D++  +PS V   QL EL ++ ++
Sbjct: 524 AFGIDRVIMLLTHSESIRDVIAFPKNSKGIDMMNDAPSYVEDNQLSELSIKTIK 577


>gi|28211802|ref|NP_782746.1| aspartyl-tRNA synthetase [Clostridium tetani E88]
 gi|46577247|sp|Q892B2|SYD_CLOTE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|28204244|gb|AAO36683.1| aspartyl-tRNA synthetase [Clostridium tetani E88]
          Length = 592

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/593 (39%), Positives = 351/593 (59%), Gaps = 18/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG L   ++     + GWV R R  GG+IF+D+RD  GI QVV   +     FE A
Sbjct: 10  RTIMCGQLREENINEQHTVMGWVQRKRNLGGLIFIDLRDRDGILQVVFGEEINKEAFEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +VRSE+ L + G ++ R A  +N N+ TG +EL  + I+ILS +E  P+ +  + +  E
Sbjct: 70  DTVRSEYCLAVTGKIIKRQA--VNENLPTGIVELQGESIKILSESETPPIYIKEDLDAAE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR  + K +  R +   ++R  +  E F+E  TP+LT S+PEGARD+LV
Sbjct: 128 NIRLKYRYLDLRRPDMQKILKIRHKTAKAVRDFLDKEEFLEVETPMLTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FYALPQ+PQ +KQLLM SGFD+YFQI  CFRDED R++R P EF Q+D+EMS
Sbjct: 188 PSRNYPGMFYALPQSPQLFKQLLMVSGFDKYFQIVKCFRDEDLRANRQP-EFTQIDLEMS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE DD+++  E +++ VF+    G  +     R+ Y  A+ +YG+DKPDLR  + + N+
Sbjct: 247 FVEMDDVIDLNERLIQYVFKNVV-GKDIKLPIERMPYKIAMSKYGSDKPDLRFGMEIENL 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            +    + F+VF ++  ++ G  V AI A+   G  R   D++ ++ ++    GLA+I +
Sbjct: 306 DDVLKETSFKVFKEV--IDNGGTVSAIKAENCAGMGRKQIDKLGDFVKTFKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNHI 420
           + DE  +     P+AK L     ++I  ++D + GD    ++    K    +    R H+
Sbjct: 364 KEDEIKS-----PIAKFLTEEELKSIIDKMDAKVGDLILIVSDAKEKVVQQSLGQLRLHL 418

Query: 421 AQELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           A+ELG++  N    F W+ +FP   +NEEE + +  H+PFT P          D   ++A
Sbjct: 419 AKELGLLKDNDELRFVWVTEFPLVSYNEEEDRWEAEHHPFTAPMDEDIQYLDTDPGKVRA 478

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H +++  + F  +G ++E    RFG L  AF+ G PPHGG+
Sbjct: 479 KAYDIVLNGEELGGGSIRIHDTKLQEKMFEVLGFTEEKAWERFGFLLEAFKFGPPPHGGL 538

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRI 591
           A G DR++M L G +N+++V  FP +QN FC  +  +P+ V   QL ELG++I
Sbjct: 539 AFGFDRMIMFLSGTENIKDVIAFPKNQNAFCP-MTEAPNVVDEVQLDELGIKI 590


>gi|297626348|ref|YP_003688111.1| Aspartyl-tRNA synthetase (aspartate--tRNA ligase) (AspRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922113|emb|CBL56681.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 615

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/604 (38%), Positives = 340/604 (56%), Gaps = 25/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  S+ G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASNEGETVTLAGWVAHRRDHGGVAFIDLRDASGVAQVVIRDEVLASSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G++  R     N  + TG IE++   +E+L+ A  LP PV       E  
Sbjct: 63  LRNEYCIAVTGVIEHRPQGNENPEMPTGDIEVNISDLEVLNAAAPLPFPVDEYTNVGEDT 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR  +H  +V R+ + +++R  +   +F +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLRYRYLDLRRPRMHDALVLRSHVTHAIRGVLEGRDFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R++ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLSPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E V+   ++    G  +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVMALGEEVMAACWKLV--GVDLPRPMRRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF       P      +P       R F D   EWA+ +G  GLAYI   + 
Sbjct: 300 FFADTPFRVFQA-----PYVGAVVMPGGAAQPRRQF-DAWQEWAKQRGARGLAYIV--VT 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           +SG ++  GPVAK+++      I  ++  + GD+ FF AG           AR  I    
Sbjct: 352 DSGELS--GPVAKNISDTEKAGIAEKVGAKPGDAIFFAAGARTASQELLGAARLEIGARC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE-KKIDFA---------HNPFTMPQG-GMESLKGND 473
            + +   + FCW++D P ++   E   + D A         H+ FT P+   M+S    D
Sbjct: 410 ELYDPKDWAFCWVVDAPLFKPTSEAVAEGDVAVGAGAWTAVHHAFTSPKPESMDSFD-TD 468

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  ++ YD VCNG E+  G IR H  +V  + F  +G+S+E  + +FG L  AF+ G 
Sbjct: 469 PGSALSYGYDFVCNGNEVGGGSIRIHRRDVQERVFKVMGLSQEEAQQKFGFLLDAFKFGA 528

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR+VMLL G   +R+V  FP + N  D L  +P+ +S +Q RE G+    
Sbjct: 529 PPHGGIAFGLDRLVMLLGGFDTIRDVIAFPKTGNGFDPLTQAPAPISAQQRREAGVDAKP 588

Query: 594 NPKK 597
            PKK
Sbjct: 589 APKK 592


>gi|153816116|ref|ZP_01968784.1| hypothetical protein RUMTOR_02364 [Ruminococcus torques ATCC 27756]
 gi|145846601|gb|EDK23519.1| hypothetical protein RUMTOR_02364 [Ruminococcus torques ATCC 27756]
          Length = 569

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/577 (40%), Positives = 337/577 (58%), Gaps = 13/577 (2%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           GWV + R  GG++F+D+RD  GI QVV      D+A  E A  +RSE+V+ I G V  RS
Sbjct: 2   GWVQKNRNKGGLVFVDVRDRSGIIQVVCEEGKTDAALIEKAAGLRSEYVVAIVGEVAMRS 61

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
              +N  I TG+IE+   ++ ILS A   P P+    +  E +R KYR+LDLRR  L +N
Sbjct: 62  G-AVNDKIATGEIEVIPSELRILSEALTPPFPIEENSKTKEEVRLKYRYLDLRRADLQRN 120

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           ++ +++++   R     E F+E  TP+L  S+PEGARD+LVPSRV+ GSFY LPQ+PQ Y
Sbjct: 121 LMMKSQVMTLTRQFFSEEGFLEVETPVLGKSTPEGARDYLVPSRVHPGSFYGLPQSPQLY 180

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQLLM SGFDRY QIA CFRDED R+DR P EF Q+DME+SFV+ D++++  E  L  VF
Sbjct: 181 KQLLMCSGFDRYIQIARCFRDEDLRADRQP-EFTQIDMELSFVDVDEVIDVNERYLARVF 239

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
           +E   G  V     R+ + +A+ R+G+DKPDLR  + + +VT+   +  F VF+   +V 
Sbjct: 240 KEVL-GVDVPLPIQRMTWQEAMDRFGSDKPDLRFGMELTDVTDVVKNCGFSVFTG--AVE 296

Query: 322 PGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
            G  V  I AKG GG  R   D++  + +  G  GLAYI   + E G++      AK + 
Sbjct: 297 NGGSVRGINAKGQGGMPRKKIDKLTAFVKDYGAKGLAYI--AIQEDGSIK--SSFAKFMT 352

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
               +A+   +  + GD   F A             R  +A++L +++ N F F WI +F
Sbjct: 353 EEEMDALIKAMGAEAGDLLLFAADKNKVVWDSLGALRVELAKQLELLDKNEFRFVWITEF 412

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P  EW+EE+ +    H+PFTMP      L  +D   ++A  YD+V NG EI  G +R   
Sbjct: 413 PLLEWSEEQNRYVAMHHPFTMPMEEDLPLIDSDPGKVRAKAYDIVLNGNEIGGGSVRIFQ 472

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            ++  + F  +G +KE   ++FG L  AF+ G+PPH G+A G+DR+VML+    ++R+V 
Sbjct: 473 DDIQEKMFEVLGFTKEQAYSQFGFLLDAFKYGVPPHAGLAYGLDRLVMLMAKQDSIRDVI 532

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            FP  ++   L+  +PS V V+QL ELGL      +K
Sbjct: 533 AFPKVKDASCLMTEAPSVVDVKQLNELGLETTAETEK 569


>gi|329960003|ref|ZP_08298499.1| aspartate--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328533137|gb|EGF59906.1| aspartate--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 585

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 230/592 (38%), Positives = 345/592 (58%), Gaps = 16/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           YR+H+CG+L +SDV   V L+GWV R R  GG+ F+D+RD YGITQ+V N +  +   E 
Sbjct: 2   YRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ I+G V  R ++  N++I TG IE+   ++ +L+ +   P  +    +  
Sbjct: 62  ANRLGREFVIQIEGTVNERFSK--NSHIPTGDIEIIVSELNVLNSSLTPPFTIEENTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  +  N+  R ++   +R  + ++ FIE  TPIL  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQDDI+N  E + + +F+E   G  ++  FLR+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQDDIINLFEGMAKYLFKEI-RGVELTGPFLRMPWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +        F VF      N  Y +  I A+G     R   D + E+ +         ++
Sbjct: 298 LMGILKGHGFTVFD-----NAAY-IGGICAEGAASYTRKQLDALTEFVKRPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  GNV     V K       + ++     + GD    ++G D +K      + R  
Sbjct: 352 ARVEADGNVK--SSVDKFYTQEVLQEMKAAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  +++A
Sbjct: 410 MGNQLGLRDKNQFALLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+VCNG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAQEQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL L +
Sbjct: 530 AYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQKQLDELNLVV 581


>gi|297562031|ref|YP_003681005.1| aspartyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846479|gb|ADH68499.1| aspartyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 584

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 230/586 (39%), Positives = 328/586 (55%), Gaps = 18/586 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G+ V L+GWV R R HGG++FLD+R+  G+ QVV   D    ++A  
Sbjct: 3   RTHEAGALRAEHAGATVVLAGWVARRRDHGGVVFLDLREASGVVQVVVRED----DLAHD 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  I TG +E+ A +IE+LS A  LP  +    +  E  
Sbjct: 59  LRAEYCIKVTGSVRVRPEGNENPEIPTGAVEVVADEIEVLSEAAPLPFQLDSAADVAEET 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LD+RR  +  N+  R++        M    F    TP +T S+PEGARDFLVP 
Sbjct: 119 RLRYRYLDIRRQEMADNLRLRSKATYVAHEVMRDLGFTYVETPYMTRSTPEGARDFLVPV 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM  G +RY+Q+  CFRDED R+DR P EF Q+D+EMSFV
Sbjct: 179 RLQPGHWYALPQSPQLFKQLLMVGGMERYYQLTRCFRDEDLRADRQP-EFTQIDLEMSFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D+    E +   +  E   G  +   F R+ Y +A+ R+G+DKPDLR    +  VT 
Sbjct: 238 DEEDLFAVGEKLFTRLLREV-RGVELPERFPRMRYSEAMDRFGSDKPDLRFGQELVEVTA 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+   GG    R   D   EWARS+G  GLAY+   +
Sbjct: 297 YFADTPFRVFKAPY-------VGAVVMPGGASQTRKELDAWQEWARSRGAKGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G++ G  PVAK+L+      +  ++    GD+ FF AG           AR  I + 
Sbjct: 348 QEDGSLGG--PVAKNLSEAERGGLAAQVGAAPGDAVFFAAGARTASQELLGAARLEIGRR 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G+I+ + +E  WI D P +E  +EE      H+PFT P    E+   +   +  +  +D
Sbjct: 406 CGLIDTSRWEILWITDMPLFEEADEEGSWKPVHHPFTAPAVQDEADFQDHPGTTDSRAFD 465

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG+E+ SG IR H +E+  + F  +G+SK   E++FG L  AF+ G PPHGG+A G 
Sbjct: 466 LVLNGYELVSGSIRIHRAEMQQRIFDVIGLSKAEAESKFGFLLEAFKFGPPPHGGLAVGW 525

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           DRIVMLL G   +REV  FP + +  D L G+P+ ++ EQ  E G+
Sbjct: 526 DRIVMLLAGQPTIREVIAFPKTASGGDPLTGAPTPITAEQRAEAGV 571


>gi|223984105|ref|ZP_03634257.1| hypothetical protein HOLDEFILI_01549 [Holdemania filiformis DSM
           12042]
 gi|223963899|gb|EEF68259.1| hypothetical protein HOLDEFILI_01549 [Holdemania filiformis DSM
           12042]
          Length = 580

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 227/590 (38%), Positives = 344/590 (58%), Gaps = 17/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L +++ G  V + GWV R R  G ++F+D+RD  GI Q+    D    E  K 
Sbjct: 3   RTHNNGELRLANAGEHVTVVGWVARRRNLGALVFIDLRDRSGIVQITV--DEKLAEQVKD 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E++L ++G V+ R  +  N  + TG+IE+ A+ + I++ AE  P+ +  E +  E  
Sbjct: 61  VRNEYILQVEGKVVERQDK--NPKMATGEIEIYAENVNIVNTAETTPMIIAEETDALEDT 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  +  N++ R ++    R  +    FIE  TPIL  S+PEGARD+LVPS
Sbjct: 119 RLKYRYLDLRRAPIQNNLILRHKVTMLTRNYLSDHGFIEVETPILCKSTPEGARDYLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+ +G F+ALPQ+PQ YKQLLM  G ++YFQIA CFRDED R+DR P EF Q+D+EMSFV
Sbjct: 179 RIFKGKFFALPQSPQIYKQLLMVGGIEKYFQIARCFRDEDLRADRQP-EFTQIDIEMSFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++ +   +E +++ +F    N     + F R+ Y++ + RYG+DKPD R  + + N+  
Sbjct: 238 DEEQVWTVVEGLMKEIFRNLKNVEL--DAFPRLTYNECMARYGSDKPDTRFDMEIQNLNA 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F  +EF VF  +L   P   V AI A       +R   D++ E+ +  G   LA   W 
Sbjct: 296 VFKDTEFTVFKNVLE-QPKGMVGAIVAAQAADQFSRKDIDKLQEFVKIYGAKALA---WL 351

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G ++  G VAK L      A+   L ++D D  F IA D  K    A  A R  + 
Sbjct: 352 KMSQGELS--GSVAKVLKPEEKNALIETLGLKDNDLIFMIA-DKAKVAQTALGALRVKLG 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +I+ + + F W+ +FP +E++EEE++   AH+PFT P         +D  +  +  
Sbjct: 409 RQLNLIDESRYNFLWVTNFPMFEYSEEEQRYVAAHHPFTSPNLEDVDKLMSDPENCYSRA 468

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+ SG IR H   V  + F  +G+S E    +FG    AF+ G PPHGG+  
Sbjct: 469 YDLVLNGYELLSGSIRIHDQHVQEKVFEAIGMSMEEAREKFGFFIDAFRYGTPPHGGVGI 528

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G++R+VM+L G  N+R+V  FP + +  DL+  +P+TV  +QL+EL + +
Sbjct: 529 GLERLVMILAGTDNIRDVVAFPKTASASDLMSEAPNTVDEKQLKELHIAL 578


>gi|126697217|ref|YP_001092103.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166225373|sp|A3PFH7|SYD_PROM0 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|126544260|gb|ABO18502.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 598

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 231/602 (38%), Positives = 359/602 (59%), Gaps = 22/602 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R   C +L  +D+G  V L GWV R R HGG+IF+D+RDH G  Q+  NPD  +A F+ A
Sbjct: 2   RNKICKELNNTDIGKLVNLCGWVDRRRDHGGVIFIDLRDHSGFLQITINPDDGAALFKQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119
           +++R+E V+ + G++  R  ++IN N+ TG++EL  + ++IL+ + + LP PV       
Sbjct: 62  ETLRNETVIMVSGIINERPKDSINTNLSTGELELKVKDLQILNQIKKNLPFPVSIHDYEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLRR  L +N+  R +II   R  +    F E  TP+LT S+PEGARD
Sbjct: 122 TKEELRLKYRYLDLRRGKLLENLKTRHKIIKVAREFLDNFGFTEVETPLLTKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP+R++ G F+ALPQ+PQ +KQLLM  G D+Y+QIA CFRDED R+DR P EF QLD+
Sbjct: 182 FLVPARLSNGEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ +++I++  E++++ +++E  N    +N F R+ + +A+  YGTD+PD R  +++
Sbjct: 241 EMSFISEEEIISFNESLIKKIWKEVLN-IKFNNAFPRMSWQEAMDNYGTDRPDTRYQMLL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-----DRMNEWARSQGQP 354
            ++        F +F+K  ++  G  + +I  KGG  + +         + + A+  G  
Sbjct: 300 KDLGGILGDIGFNIFTK--AIKSGGYIKSITVKGGNSSISNVRIKPGGDIFQVAKDAGAG 357

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GLA+I  + DE   +  +G +  +L+  +   I    + +DGD     AGD L       
Sbjct: 358 GLAFIRVKGDE---LETIGAIKNNLSEEHIADILKITEAKDGDLILLGAGDKLIVNQSLD 414

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG----GMESLK 470
             R +IA++L +I+ + + F W+ DFP +E NEEE + +  H+PF  P+       E+LK
Sbjct: 415 RVRQYIAKDLNLIDKSKWNFLWVTDFPMFERNEEENRYEALHHPFCSPKNIKSKDSENLK 474

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             ++ S  A  YDLV NG E+  G +R H + +  +    VG++ + ++ +FG L  A +
Sbjct: 475 -KEIESSTANAYDLVLNGLELGGGSLRIHEANLQREVLKMVGLTDKEIDEKFGFLIEALE 533

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DRI ML++G  ++RE   FP +Q    LL  +PS VS  QL+EL + 
Sbjct: 534 MGAPPHGGIAFGLDRITMLIIGTDSIRETIAFPKNQQAKCLLTNAPSNVSESQLKELDIE 593

Query: 591 IV 592
           I 
Sbjct: 594 IT 595


>gi|332664736|ref|YP_004447524.1| aspartyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332333550|gb|AEE50651.1| aspartyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 594

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/595 (39%), Positives = 344/595 (57%), Gaps = 24/595 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61
           YRTH+CG+L ++DV   V+LSGWV   R  G + FLD+RD YGITQ+V     ++   E 
Sbjct: 2   YRTHTCGELRMTDVDKTVKLSGWVQTTRDFGAMTFLDLRDRYGITQLVFSMEENAELCEQ 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +  E+V+ I+G V  RS + +N +  TG+IE+ AQ +++L+ ++  P  +  E +  
Sbjct: 62  ARKLGREYVIEIEGKVRERSNKNLNRD--TGEIEIVAQSMKVLNASKVPPFTIEDETDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  +  N++ R+++   +R  +  +NFIE  TP L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRSPVQNNLIFRSKLALEVRKFLSNQNFIEVETPFLIKSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQ+LM +GFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTFKQILMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +FV ++DILNT E + R +F           +F R+ YDDA+R YG+DKPDLR  +   +
Sbjct: 239 AFVTREDILNTFEALTRHLF--LHTLGLELGDFPRMSYDDALRLYGSDKPDLRFGMPFAD 296

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLAY 358
           +T+      F VF      +    V  I AKG     R   D + EW +    G  GL Y
Sbjct: 297 LTDLTKGRGFVVF------DSAETVIGINAKGQADYTRKQVDELTEWVKRPQIGAKGLIY 350

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           + +  D +   +    V K             L+ + GD    +AG+  K      + R 
Sbjct: 351 VRYNADGTLKSS----VDKFFTEDQLRDWAQHLEAEPGDLMLIMAGEEEKTRKQLGELRL 406

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESLKGNDL 474
            + + LG++    F+  W++DFP  EW+E+ ++    H+PFT P+      M S   N L
Sbjct: 407 EMGRRLGLMKPGDFKPLWVLDFPLLEWDEDTERFYAMHHPFTSPKPDDVVKMASDDRNVL 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YDLV NG EI  G IR +  ++ ++ FS +G S E  E +FG L  AF+ G P
Sbjct: 467 KGLRADAYDLVLNGVEIGGGSIRIYDRDLQMKNFSLLGFSTEEAEAQFGFLLGAFEFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PHGGIA G DR+  ++ G  ++R+   FP +    D+++ +PS ++  QL+EL L
Sbjct: 527 PHGGIAFGFDRLCSVMNGQNSIRDFIAFPKNNQGRDMMIDAPSGIADVQLKELSL 581


>gi|294341509|emb|CAZ89926.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Thiomonas sp. 3As]
          Length = 599

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 232/602 (38%), Positives = 352/602 (58%), Gaps = 15/602 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CG +  + +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD +A F  A+
Sbjct: 4   RSQYCGQVTEAQMGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAAMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + GLV  R A T N  + +G+IE+    I +L+ +   P  +  +    E+
Sbjct: 64  GLRNEFCVQVQGLVRPRPAGTENEGMTSGKIEVLCHDITVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+  ++R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLKLRYRVAMAVRRFLDGQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQ+LM +GFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGEFFALPQSPQLFKQMLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++RGVF++  +   ++  +  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LNEQEIRDLFETMIRGVFKDVLDIE-LATPYPVMTYAEAMARFGSDKPDLRVKMEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +  PG  V A+   GGG  +R+  D   E+ +  G  GLA+I   
Sbjct: 301 DVMADVDFKVFSGP-ATTPGGRVVALRVPGGGEMSRSEIDAYTEFVKIYGAKGLAWIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416
               G      P+ K+L+     A+  R   Q+GD  FF A D  K  + A  A      
Sbjct: 360 DVSKGRDGLQSPIVKNLHDAAITAVLQRSGAQNGDLLFFGA-DKSKVVADAIGALRVKIG 418

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +   +  G+   N ++  W++DFP +E++E+ ++    H+PFT P+ G E L       
Sbjct: 419 HSEFGKSHGLFE-NVWKPLWVVDFPMFEFDEDNQRWAAVHHPFTAPKDGHEELMDTAPEK 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G +R H +EV  + FS + I  +    +FG L  A Q G PPH
Sbjct: 478 CIAKAYDMVLNGWEIGGGSVRIHRAEVQSKVFSALKIGPDEARAKFGFLLDALQYGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QL+EL +R+  NP+
Sbjct: 538 GGIAFGLDRIVTMMTGAQSIRDVIAFPKTQRAQCLLTNAPSPVDEKQLKELHIRL-RNPQ 596

Query: 597 KI 598
            +
Sbjct: 597 PV 598


>gi|38233939|ref|NP_939706.1| aspartyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|62287571|sp|Q6NGZ4|SYD_CORDI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|38200200|emb|CAE49881.1| aspartyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 601

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 243/611 (39%), Positives = 340/611 (55%), Gaps = 31/611 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH  RTH  GDLG    G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +    E
Sbjct: 1   MHVLRTHLAGDLGKETAGQTVTLTGWVSRRRDHGGVIFIDLRDSSGLVQVVFRENDVA-E 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP---VFGE 117
            A  +RSE+ + + G V +R   + N N+ +G IE++   +EIL+ A  LP     V   
Sbjct: 60  QAHHLRSEFCIKVTGEVEARPEGSENPNLASGAIEVNVTDLEILNEAAPLPFQIDDVSQG 119

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            E  E  R KYR+LDLRR      +  R++   + R  + + +F+E  TP LT S+PEGA
Sbjct: 120 GEVGEETRLKYRYLDLRRPNQGAALRLRSQANKAARNVLDSHDFVEIETPTLTRSTPEGA 179

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RDFLVP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QL
Sbjct: 180 RDFLVPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQL 238

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV+QDD++   E ++  +++    G  +     R+ Y DA+R YG+DKPDLR  I
Sbjct: 239 DIEMSFVDQDDVIALAEEIVSSLWKLI--GYEIPTPIPRMTYADAMRLYGSDKPDLRFDI 296

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGL 356
            +   T+ F ++ FRVF           V A+   GG    R   D   EWA+ +G  GL
Sbjct: 297 KIVECTDFFKNTTFRVFQNEY-------VGAVVMDGGASQPRRQLDAWQEWAKQRGAKGL 349

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AYI   + E+G +   GPV+K++       I   +  + GD  FF AG+     +    A
Sbjct: 350 AYIL--VGENGEL--TGPVSKNITDEERAGIAAHVGAKPGDCIFFAAGETKSSRALLGAA 405

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGM 466
           RN IA++L +I    + F W++D P +E + +            K    H+ FT P+   
Sbjct: 406 RNEIAKKLDLIKEGDWAFTWVVDAPLFEPSSDATASGDVALGHSKWTAVHHAFTSPKPEW 465

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
                 +     A+ YD+VCNG EI  G IR H  +V  + F  +GI+++    +FG L 
Sbjct: 466 LDSFDENPGEATAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEDEAREKFGFLL 525

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            AF  G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ + +EQ RE
Sbjct: 526 DAFAFGAPPHGGIAFGWDRIVSLLGGFSSIRDVIAFPKSGGGVDPLTDAPAPIPLEQRRE 585

Query: 587 LGLRIVENPKK 597
            G+     PKK
Sbjct: 586 TGVDF--KPKK 594


>gi|260187586|ref|ZP_05765060.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|289448221|ref|ZP_06437965.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis CPHL_A]
 gi|289421179|gb|EFD18380.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis CPHL_A]
          Length = 596

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 242/611 (39%), Positives = 339/611 (55%), Gaps = 31/611 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANP-DSAC 58
           M   R+H+ G L   D G  V L+GWV R R HGG+IF+D+RD  GI QVV  +P D+  
Sbjct: 1   MFVLRSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEV 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
              A  +R+E+ + + G+V  R     N  I TG+IE++A  + +L   E  PLP   + 
Sbjct: 61  LAQAHRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLG--ECAPLPFQLDE 118

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R KYR+LDLRRD     I  R+R+  + R  +   +F+E  TP +T S+PEGAR
Sbjct: 119 PAGEELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGAR 178

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD
Sbjct: 179 DFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLD 237

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSFV+ +DI+   E VL  ++     G  +     RI Y +A+RR+GTDKPDLR  + 
Sbjct: 238 MEMSFVDAEDIIAISEEVLTELWALI--GYRIPTPIPRIGYAEAMRRFGTDKPDLRFGLE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           +   T+ F  + FRVF           V A+   GG    R   D   +WA+ +G  GLA
Sbjct: 296 LVECTDFFSDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLA 348

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+   + E G +   GPVAK+L       +   +  + GD  FF AG      +    AR
Sbjct: 349 YVL--VAEDGTLG--GPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAAR 404

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI----------DFAHNPFTMPQGGME 467
             IA  LG+I+ + + F W++D P +E  +E                 H+ FT P+   E
Sbjct: 405 VEIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVASGAWTAVHHAFTAPKPEWE 464

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
               +D  S+ A  YD+VCNG EI  G +R H  ++  + F+ +G+ K   E +FG L  
Sbjct: 465 DRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEAEEKFGFLLE 524

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF  G PPHGGIA G DR   LL G  ++REV  FP +    D L  +P+ ++ +Q +E 
Sbjct: 525 AFMFGAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKES 584

Query: 588 GLRIVENPKKI 598
           G  I   PK++
Sbjct: 585 G--IDAQPKRV 593


>gi|315636219|ref|ZP_07891473.1| aspartate--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479580|gb|EFU70259.1| aspartate--tRNA ligase [Arcobacter butzleri JV22]
          Length = 591

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 232/596 (38%), Positives = 342/596 (57%), Gaps = 20/596 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
           + RTH C D+    +G  V ++GWV+  R HGGIIF+D+RD  G+ Q+VA+P        
Sbjct: 2   KLRTHYCTDVTEKLIGQTVTVAGWVNSRRDHGGIIFIDLRDKSGLVQLVADPQDCKDALA 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA++VR E+VL   G V +R     N N+ITG+IE+  + + I + +  +P  +  E+  
Sbjct: 62  IAETVRDEFVLIATGKVRARGEGLENPNLITGKIEIILENLVIENRSRPMPFDINDEKVN 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E I+ + RFL+LR          R++     R  +    F++  TPILT S+PEGARD+
Sbjct: 122 DE-IKLRNRFLELRSKKSFDIFQLRSKATIQARNTLDELGFLDVETPILTKSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM +GFD+YFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRVHAGEFYALPQSPQLFKQLLMVAGFDKYFQIAKCFRDEDLRADRQP-EFTQIDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF  Q+D++   E ++  +F +   G  V + F R+ Y +A+ +YG+DKPDLR  + + 
Sbjct: 240 MSFCNQEDVIKVAEKLIYDIFTKC--GKNVPSTFRRMKYSEAMEKYGSDKPDLRFDMPLV 297

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGL 356
           +V + FV+S   +F++I        + A+  K   G+  F  R      ++ R  G  GL
Sbjct: 298 DVIDIFVNSTNEIFAEIAKDKKNNRIKALKCK--NGDNIFSKRQMKSFEDYVRKFGAKGL 355

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            Y  +++ E G     GP+ K  +  + E I    +++ GD  FF AG       +    
Sbjct: 356 GY--FQMKEDG---LKGPLTKFFSEADLEEIIKVTELEVGDVVFFGAGAKKVVWDYMGRF 410

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG-NDLL 475
           R  +A E+ I+  + +EF W++DFP +E   E+ +    H+PFTMP      L    DL 
Sbjct: 411 RLFLANEMNIVPKDAYEFLWVVDFPMFEV--EDGRTKALHHPFTMPNVEKYDLDNIEDLE 468

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            I++  YD+V NG E+  G IR H  E+  + F  +GIS+E  + +FG L  A   G P 
Sbjct: 469 EIESIAYDIVLNGTELGGGSIRIHKEEIQSKVFKLMGISQEEAKEKFGFLLDALSYGAPS 528

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG A G+DR++MLL G  ++R+V  FP +Q    LL  +PS V  EQL+EL +RI
Sbjct: 529 HGGFALGLDRMIMLLAGTDSIRDVIAFPKTQKAQCLLTQAPSAVDEEQLKELSIRI 584


>gi|15609709|ref|NP_217088.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|148662411|ref|YP_001283934.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148823767|ref|YP_001288521.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167968818|ref|ZP_02551095.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215404520|ref|ZP_03416701.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215412344|ref|ZP_03421104.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215427972|ref|ZP_03425891.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215431528|ref|ZP_03429447.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|215446821|ref|ZP_03433573.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|218754309|ref|ZP_03533105.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219558574|ref|ZP_03537650.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|253798347|ref|YP_003031348.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 1435]
 gi|254232691|ref|ZP_04926018.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis C]
 gi|254551623|ref|ZP_05142070.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|289553638|ref|ZP_06442848.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 605]
 gi|289570742|ref|ZP_06450969.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T17]
 gi|289746364|ref|ZP_06505742.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis 02_1987]
 gi|289751195|ref|ZP_06510573.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T92]
 gi|289754690|ref|ZP_06514068.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis EAS054]
 gi|289758702|ref|ZP_06518080.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T85]
 gi|289762743|ref|ZP_06522121.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis GM 1503]
 gi|294994318|ref|ZP_06800009.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297635182|ref|ZP_06952962.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297732174|ref|ZP_06961292.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298526045|ref|ZP_07013454.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis
           94_M4241A]
 gi|306776845|ref|ZP_07415182.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu001]
 gi|306780609|ref|ZP_07418946.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu002]
 gi|306785373|ref|ZP_07423695.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu003]
 gi|306789973|ref|ZP_07428295.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu004]
 gi|306794053|ref|ZP_07432355.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu005]
 gi|306798451|ref|ZP_07436753.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu006]
 gi|306804331|ref|ZP_07440999.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu008]
 gi|306807630|ref|ZP_07444298.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu007]
 gi|306969831|ref|ZP_07482492.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu009]
 gi|306972960|ref|ZP_07485621.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu010]
 gi|307080671|ref|ZP_07489841.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu011]
 gi|307085258|ref|ZP_07494371.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu012]
 gi|313659508|ref|ZP_07816388.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|1478240|emb|CAB01271.1| PROBABLE ASPARTYL-TRNA SYNTHETASE ASPS (ASPARTATE--TRNA LIGASE)
           (ASPRS) (ASPARTIC ACID TRANSLASE) [Mycobacterium
           tuberculosis H37Rv]
 gi|124601750|gb|EAY60760.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis C]
 gi|148506563|gb|ABQ74372.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148722294|gb|ABR06919.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis F11]
 gi|253319850|gb|ACT24453.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 1435]
 gi|289438270|gb|EFD20763.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 605]
 gi|289544496|gb|EFD48144.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T17]
 gi|289686892|gb|EFD54380.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis 02_1987]
 gi|289691782|gb|EFD59211.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T92]
 gi|289695277|gb|EFD62706.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis EAS054]
 gi|289710249|gb|EFD74265.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis GM 1503]
 gi|289714266|gb|EFD78278.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T85]
 gi|298495839|gb|EFI31133.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis
           94_M4241A]
 gi|308214773|gb|EFO74172.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu001]
 gi|308326544|gb|EFP15395.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu002]
 gi|308329966|gb|EFP18817.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu003]
 gi|308333583|gb|EFP22434.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu004]
 gi|308337610|gb|EFP26461.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu005]
 gi|308341275|gb|EFP30126.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu006]
 gi|308345951|gb|EFP34802.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu007]
 gi|308349083|gb|EFP37934.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu008]
 gi|308352640|gb|EFP41491.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu009]
 gi|308357651|gb|EFP46502.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu010]
 gi|308361593|gb|EFP50444.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu011]
 gi|308365212|gb|EFP54063.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu012]
 gi|323718845|gb|EGB28001.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis CDC1551A]
 gi|326904186|gb|EGE51119.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis W-148]
 gi|328458117|gb|AEB03540.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 4207]
          Length = 596

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 242/611 (39%), Positives = 339/611 (55%), Gaps = 31/611 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANP-DSAC 58
           M   R+H+ G L   D G  V L+GWV R R HGG+IF+D+RD  GI QVV  +P D+  
Sbjct: 1   MFVLRSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEV 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
              A  +R+E+ + + G+V  R     N  I TG+IE++A  + +L   E  PLP   + 
Sbjct: 61  LAQAHRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLG--ECAPLPFQLDE 118

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R KYR+LDLRRD     I  R+R+  + R  +   +F+E  TP +T S+PEGAR
Sbjct: 119 PAGEELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGAR 178

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD
Sbjct: 179 DFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLD 237

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSFV+ +DI+   E VL  ++     G  +     RI Y +A+RR+GTDKPDLR  + 
Sbjct: 238 MEMSFVDAEDIIAISEEVLTELWALI--GYRIPTPIPRIGYAEAMRRFGTDKPDLRFGLE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           +   T+ F  + FRVF           V A+   GG    R   D   +WA+ +G  GLA
Sbjct: 296 LVECTDFFSDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLA 348

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+   + E G +   GPVAK+L       +   +  + GD  FF AG      +    AR
Sbjct: 349 YVL--VAEDGTLG--GPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAAR 404

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI----------DFAHNPFTMPQGGME 467
             IA  LG+I+ + + F W++D P +E  +E                 H+ FT P+   E
Sbjct: 405 VEIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWE 464

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
               +D  S+ A  YD+VCNG EI  G +R H  ++  + F+ +G+ K   E +FG L  
Sbjct: 465 DRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEAEEKFGFLLE 524

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF  G PPHGGIA G DR   LL G  ++REV  FP +    D L  +P+ ++ +Q +E 
Sbjct: 525 AFMFGAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKES 584

Query: 588 GLRIVENPKKI 598
           G  I   PK++
Sbjct: 585 G--IDAQPKRV 593


>gi|269795068|ref|YP_003314523.1| aspartyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269097253|gb|ACZ21689.1| aspartyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 590

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/603 (39%), Positives = 341/603 (56%), Gaps = 30/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G L    +G  V L+GWV R R HGG+ F+D+RD  G+ QVV   +S    +A  
Sbjct: 3   RTHTAGSLRAEHIGQTVTLTGWVDRRRDHGGVAFIDLRDASGVAQVVIRDES----VAHP 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF----GEREY 120
           +RSE+VL + G V  R     N N+ TGQ+EL A  + +L+ +  LP  V     G    
Sbjct: 59  LRSEFVLQVTGEVSQRPDGNENTNLATGQVELVAADVVVLNESAPLPFQVSTALDGTETI 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R K+R+LDLRR    K +  R +   + R  + A+ F+E  TP LT S+PEGARDF
Sbjct: 119 GEEARLKHRYLDLRRPAPAKALRLRAKANAAARRVLDAQEFVEIETPTLTRSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 179 LVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD++   E +L  +++    G T+     R+ + DA+ RYG+DKPDLR  + + 
Sbjct: 238 MSFVEQDDVIALGEQLLVALWDLI--GVTIPTPIPRMTFKDAMERYGSDKPDLRFGLELT 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +T +F  + FRVF       P       P       R F D   EWA+ +G  GLAY+ 
Sbjct: 296 ELTGYFSETPFRVFQA-----PYVGAVVFPGGASTPRRGF-DAWQEWAKQRGAKGLAYV- 348

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               E G +   GPVAK+L+    E +      + GD+ FF AG P    +    AR  I
Sbjct: 349 -TFTEDGELG--GPVAKNLSDSEREGLAAATGAKPGDAVFFAAGKPTDARALLGAARLEI 405

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQGG-MESLKGN 472
            ++ G+I+ + + F W++D P ++   E+  +          H+ FT P    +++ + N
Sbjct: 406 GKKAGLIDEDQWAFVWVVDAPLFKPTGEDDDVAVGEGAWTAVHHAFTSPTPEWIDTFEEN 465

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
              ++ A+ YD+VCNG EI  G IR H  +V  + F+ +GI +E  + +FG L  AF  G
Sbjct: 466 PGEAL-AYAYDIVCNGNEIGGGSIRIHRRDVQERVFAIMGIGEEEAQEKFGFLLDAFAFG 524

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G DRI+ LL G+ ++R+V  FP S    D L  +P+ ++ +Q +E G+   
Sbjct: 525 APPHGGIAFGWDRILTLLTGSDSIRDVIAFPKSGGGFDPLTQAPAPITAQQRKEAGVDST 584

Query: 593 ENP 595
             P
Sbjct: 585 PKP 587


>gi|258653496|ref|YP_003202652.1| aspartyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258556721|gb|ACV79663.1| aspartyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 599

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 238/611 (38%), Positives = 341/611 (55%), Gaps = 27/611 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  + G L  +D G+ V L+GWV R R HGG+IF+D+RD  G+ QVV +        A  
Sbjct: 3   RDRNAGSLRPTDDGTTVTLAGWVARRRDHGGVIFIDLRDASGVAQVVFH-SGEVLAAAHQ 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + + G V  R A   N ++ TG IE+ A  +E+LS +  LP  +       E  
Sbjct: 62  LRSEYCVRVTGTVAIRPAGNENPDLPTGAIEVEALTLEVLSESAPLPFQIDDTISVGEET 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR      +  R ++  + R  +    F+E  TP LT S+PEGARDFLVP+
Sbjct: 122 RLKYRYLDLRRAAPAHALRLRAKVSRAARDVLDDAGFVEIETPTLTRSTPEGARDFLVPA 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 182 RLRPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E V+  ++     G+ +S    RI + +A+ +YG+DKPDLR  + +  +T+
Sbjct: 241 EQDDVIAIGEQVIASLWRLI--GHEISTPIPRISFREAMDKYGSDKPDLRFDLQLTELTD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+  KGG    R   D   EWA+ +G  GLAY+    
Sbjct: 299 YFASTPFRVFQAPY-------VGAVVQKGGASTPRRGFDAWQEWAKQRGARGLAYVTIAA 351

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           D  G +   GPVAK+++      +   +  + GD+ FF AG           AR  I + 
Sbjct: 352 D--GTLG--GPVAKNISEDERAGLAAAVGAEPGDAVFFGAGTRRSTQELLGAARLEIGRR 407

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQGGMESLKGNDL 474
            G+I+ + + F W++D P +E  +E   +            H+ FT P+         D 
Sbjct: 408 GGLIDEDAWSFVWVVDAPLFERTDETDDVTVGGAGSTWTAVHHAFTSPKPECLDTFDTDP 467

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD+VCNG EI  G IR H ++V  + F+ +G++ E  + +FG L  AF  G P
Sbjct: 468 GSALAYAYDIVCNGNEIGGGSIRIHRADVQERVFAVMGLTPEDAQTKFGFLLEAFSFGAP 527

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRIVMLL  A ++REV  FP S    D L  +P+ ++ EQ +E G+  V  
Sbjct: 528 PHGGIAFGWDRIVMLLAKATSLREVIAFPKSGGGFDPLTAAPAPITPEQRKEAGVDYV-- 585

Query: 595 PKKILKISVTT 605
           P K  K + ++
Sbjct: 586 PPKPAKATESS 596


>gi|108799275|ref|YP_639472.1| aspartyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|108769694|gb|ABG08416.1| aspartyl-tRNA synthetase [Mycobacterium sp. MCS]
          Length = 572

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/586 (40%), Positives = 331/586 (56%), Gaps = 30/586 (5%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           L+GWV R R HGG+IF+D+RD  G++QVV   + A  E A  +R+E+ + ++G+V  R  
Sbjct: 3   LAGWVARRRDHGGVIFIDLRDASGVSQVVFR-EGAVLEAAHRLRAEFCVAVEGVVEVRPE 61

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
              N  I TG IE++A  + +L   E  PLP   + E  E  R KYR+LDLRR+   K +
Sbjct: 62  GNENPEIPTGGIEVNATSLTVLG--ESAPLPFQLDDEAGEEARLKYRYLDLRREGPGKAL 119

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202
             R+++  + R  +   +F+E  TP +T S+PEGARDFLVP+R+  GSFYALPQ+PQ +K
Sbjct: 120 RLRSKVNAAAREVLARHDFVEIETPTMTRSTPEGARDFLVPARLQPGSFYALPQSPQLFK 179

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           QLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV+ DD++   E +L+ ++ 
Sbjct: 180 QLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFVDADDVIAVSEEILKALWA 238

Query: 263 EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNP 322
               G+ +     RI Y +A+ R+GTDKPDLR  + +    E F  + FRVF        
Sbjct: 239 LI--GHDLPTPLPRITYAEAMHRFGTDKPDLRFGLELVECKEFFADTTFRVFQAPY---- 292

Query: 323 GYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNI 381
              V A+   GG    R   D   EWA+ +G  GLAY+   + + G +   GPVAK+L  
Sbjct: 293 ---VGAVVMPGGASQPRRTLDGWQEWAKQRGAKGLAYVL--VGDDGTLG--GPVAKNLTD 345

Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFP 441
              + +   +    GD  FF AG P    +    AR  IA+ L +I+ + + F W++D+P
Sbjct: 346 AERDGLAAHVGANPGDCIFFAAGPPKSSRALLGAARIEIAKRLDMIDPDAWAFTWVVDWP 405

Query: 442 FYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
            +E  E+     D A         H+ FT PQ   E+    D     A  YD+VCNG EI
Sbjct: 406 LFEMAEDATAAGDVAVGSGAWTAVHHAFTAPQPQSEATFDTDPAGALADAYDIVCNGNEI 465

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G IR H  +V  + F+ +GI  +  + +FG L  AF  G PPHGGIA G DRI  LL 
Sbjct: 466 GGGSIRIHRRDVQERVFAMMGIEHDEAQEKFGFLLDAFTFGAPPHGGIAFGWDRITALLA 525

Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
              ++REV  FP S    D L G+P+ ++ +Q RE G  I   PKK
Sbjct: 526 RMDSIREVIAFPKSGGGADPLTGAPAPITPQQRRESG--IDAKPKK 569


>gi|319902143|ref|YP_004161871.1| aspartyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319417174|gb|ADV44285.1| aspartyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 585

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 231/590 (39%), Positives = 344/590 (58%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           YR+H+CG+L +SD+   V L+GWV R R  GG+ F+D+RD YGITQ+V N +  S   E 
Sbjct: 2   YRSHTCGELRISDINKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNSELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ I G V  R ++  N NI TG IE+   ++ +L+ +   P  +    +  
Sbjct: 62  ANRLGREFVIRITGSVNERFSK--NKNIPTGDIEIIVSELNVLNSSLTPPFTIEENTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  +  N+  R ++   +R  + ++ FIE  TPIL  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQDDI+N  E + + +F+E  +   ++  FLR+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQDDIINLFEGMAKYLFKEIRDVE-LTEPFLRMPWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y V  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-VGGICAEGAASYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  G+V     V K       + ++     + GD    ++G D +K      + R  
Sbjct: 352 ARIEADGSVK--SSVDKFYTQEVLQEMKSAFGAKPGDLILILSGEDVMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  +++A
Sbjct: 410 VAGQLGLRDKNKFALLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+VCNG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAQEQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL L
Sbjct: 530 AYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSVIDQKQLDELNL 579


>gi|317012431|gb|ADU83039.1| aspartyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 577

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/589 (37%), Positives = 342/589 (58%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S+ ++ A  
Sbjct: 2   RSHFCTEISEKDVGKIIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSSAYKKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKSVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++DD++  +E++L+ +F+    G+ +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DEDDVMGVVEDLLQEIFKAI--GHDISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F  S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFRDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E V+ +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEVQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|261391979|emb|CAX49443.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase; AspRS) [Neisseria
           meningitidis 8013]
          Length = 602

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/598 (39%), Positives = 353/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +     F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GGFPRMPYAEAMFYYGSDKPDMRIGLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|195952842|ref|YP_002121132.1| aspartyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|229559871|sp|B4U7P3|SYD_HYDS0 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|195932454|gb|ACG57154.1| aspartyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 594

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 234/602 (38%), Positives = 345/602 (57%), Gaps = 24/602 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           R    G +  S +G  V+L+GW+  +R HGG++F+D+RD  G  Q V   + +   ++IA
Sbjct: 3   RDTYIGLVDDSFIGKHVKLAGWIDSIRDHGGVLFIDLRDKEGKLQAVLEESGNKELYDIA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  + E V+ ++GLV  R + T N  I +G +EL  ++IE+L+ +E LP P+    +  E
Sbjct: 63  KHFKEESVVLVEGLVRRRPSGTENPKIKSGNVELLIERIELLNASETLPFPIDDNVDISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR    K I  R++ +   R       F E  TP L  S+PEGARDFLV
Sbjct: 123 ELRLKYRYLDLRRPKFQKAIKTRSKALKITRDFFEENGFYEIETPFLIKSTPEGARDFLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQ+PQ +KQ+LM SGFDRYFQIA CFRDED RSDR P EF Q+D EMS
Sbjct: 183 PSRLHPGKFYALPQSPQLFKQILMISGFDRYFQIARCFRDEDLRSDRQP-EFTQIDFEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE+ DI+   E +L  +F E  +   +S  F RI Y +A+ RYG+DKPD R  + + ++
Sbjct: 242 FVEEQDIMEISEKLLSKLFLELLDIE-LSTPFKRITYKEAMERYGSDKPDTRFGLELVDL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++ F ++ F VF    S      +          +R   D + E+ +  G  GLA   W 
Sbjct: 301 SDIFKNTNFNVFK---SAIEQKGIIKAIKINKILSRKEIDNLTEYVKGLGAKGLA---WG 354

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E+G  +   P+AK L     +A+  RL+ +D D  FF A  P        + R  + +
Sbjct: 355 KIENGEFS--SPIAKFLTEEEIKAMLSRLEAKDQDMIFFSADKPKNVYKILGNLRLQLGK 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLK-------GNDL 474
            L +I+ + F F W++DFP +E+NEEE +++  H+PFT P+   ++ +K         D+
Sbjct: 413 MLNLIDESKFAFLWVVDFPMFEYNEEEGRLEAMHHPFTSPKTEDLDKIKYIVDKSDKEDI 472

Query: 475 L----SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           +    +I A  YD+V NG EI  G IR H  ++    F  + I+ E    +FG L  A +
Sbjct: 473 INIGENIGARAYDIVLNGVEIGGGSIRIHKQDIQKLVFKILNITDEEAAMKFGFLLEALK 532

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGG+A G DR++ ++LG  ++R+V  FP +Q    LL G+P  VS +QL+EL ++
Sbjct: 533 YGAPPHGGLAFGFDRLMAMMLGFDSIRDVIAFPKTQKGTCLLTGAPDVVSDKQLKELHIK 592

Query: 591 IV 592
           I 
Sbjct: 593 IT 594


>gi|295398026|ref|ZP_06808082.1| aspartate--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973784|gb|EFG49555.1| aspartate--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 589

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/592 (38%), Positives = 347/592 (58%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R+  CG++    VG  V L GWV + R  GG+IF+D+RD  GI Q V N ++    F  A
Sbjct: 3   RSVYCGNVSNEFVGQTVTLKGWVQKRRDLGGVIFVDLRDREGIVQAVFNVENLGDQFAEA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +RSE+V+ + G V+ R     N  I TG IE+    + IL++++  P PV  + +  +
Sbjct: 63  ERLRSEYVIEVTGEVVLRGEGLANPKIKTGDIEVMVSDLTILNISKTPPFPVEDDIDVND 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR++DLRR  +  N+  R ++++++   +  + FIE  TP LT S+PEGARD+LV
Sbjct: 123 EIRMKYRYVDLRRPKMANNMKLRHQVVSTIHRYLDDQEFIEVETPYLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM++G DRY+Q+  CFRDED R DR P EF Q+D+E +
Sbjct: 183 PSRVHPGEFYALPQSPQLFKQLLMSAGMDRYYQVVRCFRDEDLRGDRQP-EFTQIDLETT 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++I + +E +L+ V +   N + ++ NF  I YDDA+ RYG DKPD R  + +  +
Sbjct: 242 FLTQEEIRDLVEGMLKTVVKRTKNID-ITENFPIITYDDAMARYGNDKPDTRFGLELVEI 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           ++     EF+VF++  ++  G  V AI  KG G N  R   D +  +A + G  G+A+I 
Sbjct: 301 SDIVDQYEFKVFNQ--AIEKGGIVKAINIKGAGDNYSRKDLDNLTPFASTYGAKGVAWI- 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ + G     GP+ K     N   +  RL  + GD   F+A          ++ R   
Sbjct: 358 -KVTDEG---LSGPIGKFFKD-NPAPLMDRLQAETGDVLVFVADKESVVNQSLSEIRLKF 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ N F F W+ ++P  E++E+ K+ +  H+PFTMP          +   + A 
Sbjct: 413 GRELDLMDKNQFNFLWVTNWPLLEYDEDTKRFNAMHHPFTMPNEEDVDKLAENPEDVYAQ 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  ++ +Q F  +G ++E   ++FG L  A   G PPHGG+A
Sbjct: 473 AYDIVLNGYEIGGGSLRIYQKDMQMQMFKALGFTEESAISQFGFLLNALDYGFPPHGGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL G +N+REV  FP +    D L  +PS VS +QL EL L I 
Sbjct: 533 LGLDRLVMLLAGEENIREVIAFPKNGRAFDPLTEAPSQVSEQQLEELSLSIT 584


>gi|328949312|ref|YP_004366649.1| aspartyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328449636|gb|AEB15352.1| aspartyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 610

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/613 (38%), Positives = 353/613 (57%), Gaps = 29/613 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIA 62
           RT +CG+L  +DVG  V L+GWV R R  GG+IF+ +RD YGITQV+   N      +IA
Sbjct: 6   RTVTCGELTKADVGKKVVLNGWVSRTRDLGGLIFIRLRDRYGITQVMVGDNASDEVKKIA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP- 121
            S++SE+ + ++G+V +R+ + +N ++ TG+IE+ A  IEI + ++ELP  +   R+   
Sbjct: 66  ASLKSEYCIAVEGVVAARAEKDVNKDMATGEIEVEACDIEIFTTSQELPFSIEEVRQKDG 125

Query: 122 ------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                 E +R KYR+LDLRR+ +  NI+ R+ +  + R  + ++ F+E  TP    S+PE
Sbjct: 126 TLVVANEDLRLKYRYLDLRREPMQHNIILRSAVTFATREFLTSKGFLEIETPTFIKSTPE 185

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARD+LVPSRV+ G FY+LPQ+PQ YKQLLM SGFD+YFQIA C+RDED R DR P EF 
Sbjct: 186 GARDYLVPSRVHPGKFYSLPQSPQLYKQLLMVSGFDKYFQIARCYRDEDARGDRQP-EFT 244

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           Q+DMEMSF  ++++L+T E ++R +F++  N   +  +F RI +DDA   YG+DKPDLR 
Sbjct: 245 QIDMEMSFTNREEVLDTTEELMRHIFKKTLN-YELPVHFDRISWDDAFDLYGSDKPDLRF 303

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNP----------GYEVWAIPAKGGGGNRAFCDRMN 345
            + M +       S+F  F K  + N           G +   +       +R   + + 
Sbjct: 304 DMKMQDAAFMADLSDFNAF-KAGAANADKNIERHKRSGLKALVVKNAADKYSRKHIEALE 362

Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD 405
             A+     GLA++  ++D  G     G ++K       E I  RL  +  D   F++ +
Sbjct: 363 AVAKINHAKGLAWM--KVDAEGKFE--GGISKFFAGKEAE-ICSRLGAEKNDLLLFVSDE 417

Query: 406 PLKFCSFAADA-RNHIAQELGIIN-CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463
             +    A  A R  + ++L + N  + F F WI+DFP++ WNEEE   +  H+ FT+PQ
Sbjct: 418 KWQTACVALGAVRKQLGKDLNLYNPKDEFHFAWIIDFPYFAWNEEENHWETEHHMFTLPQ 477

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                   +D  S+K   YDLV NG+E+ASG +R +   +  + F  VG S+E  E  FG
Sbjct: 478 KKYWDTLESDPGSVKGDLYDLVLNGYELASGSMRINDPALQERIFEIVGYSRERAEKAFG 537

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            L +AF+ G PPHGGIA G+DR++ML+   +++ EV  FP +      +   PS V   Q
Sbjct: 538 FLVQAFKFGAPPHGGIAPGLDRLIMLMCHEESIHEVIAFPKNNLAMSPMDECPSAVDQSQ 597

Query: 584 LRELGLRIVENPK 596
           L +L L+  E  K
Sbjct: 598 LDDLHLKCTEVEK 610


>gi|46198667|ref|YP_004334.1| aspartyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55980680|ref|YP_143977.1| aspartyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|549026|sp|P36419|SYD_THETH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62287575|sp|Q72KH6|SYD_THET2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|66773800|sp|Q5SKD2|SYD_THET8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|420805|pir||S33743 aspartate-tRNA ligase (EC 6.1.1.12) - Thermus aquaticus
 gi|9257069|pdb|1EFW|A Chain A, Crystal Structure Of Aspartyl-Trna Synthetase From Thermus
           Thermophilus Complexed To Trnaasp From Escherichia Coli
 gi|9257070|pdb|1EFW|B Chain B, Crystal Structure Of Aspartyl-Trna Synthetase From Thermus
           Thermophilus Complexed To Trnaasp From Escherichia Coli
 gi|12084697|pdb|1G51|A Chain A, Aspartyl Trna Synthetase From Thermus Thermophilus At 2.4
           A Resolution
 gi|12084698|pdb|1G51|B Chain B, Aspartyl Trna Synthetase From Thermus Thermophilus At 2.4
           A Resolution
 gi|20151171|pdb|1L0W|A Chain A, Aspartyl-Trna Synthetase-1 From Space-Grown Crystals
 gi|20151172|pdb|1L0W|B Chain B, Aspartyl-Trna Synthetase-1 From Space-Grown Crystals
 gi|396501|emb|CAA50282.1| aspartyl-tRNA synthetase [Thermus thermophilus]
 gi|46196290|gb|AAS80707.1| aspartyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55772093|dbj|BAD70534.1| aspartyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 580

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 253/594 (42%), Positives = 345/594 (58%), Gaps = 24/594 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  + VG  V L GWV+R R  GG+IFLD+RD  G+ Q+VA+P S  +  A+ 
Sbjct: 3   RTHYAGSLRETHVGEEVVLEGWVNRRRDLGGLIFLDLRDREGLVQLVAHPASPAYATAER 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGER----- 118
           VR EWV+   GLV  R     N  + TG++E+    +E+L+ A+  P PV  G R     
Sbjct: 63  VRPEWVVRAKGLVRLRPEP--NPRLATGRVEVELSALEVLAEAKTPPFPVDAGWRGEEEK 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  E +R KYR+LDLRR  + +N+  R R+I ++   +  E F++  TP LT S+PEGAR
Sbjct: 121 EASEELRLKYRYLDLRRRRMQENLRLRHRVIKAIWDFLDREGFVQVETPFLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP R   G FYALPQ+PQ +KQ+LM +G DRYFQIA CFRDED R+DR P +F QLD
Sbjct: 181 DFLVPYRHEPGLFYALPQSPQLFKQMLMVAGLDRYFQIARCFRDEDLRADRQP-DFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE +D+L   E ++  VF E + G  +   F R+ Y++A+ RYG+DKPDLR  + 
Sbjct: 240 LEMSFVEVEDVLELNERLMAHVFRE-ALGVELPLPFPRLSYEEAMERYGSDKPDLRFGLE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +  V   F  S FRVF +  SV       A+P      +R     + E A+     GLA+
Sbjct: 299 LKEVGPLFRQSGFRVFQEAESVK----ALALPK---ALSRKEVAELEEVAKRHKAQGLAW 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
              R++E G   G   VAK L  V  EA+    + + GD+  F+AG P K  + A  A  
Sbjct: 352 A--RVEEGGFSGG---VAKFLEPVR-EALLQATEARPGDTLLFVAG-PRKVAATALGAVR 404

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
             A +L  +    F F W++DFP  EW+EEE+   + H+PFT P      L   D   ++
Sbjct: 405 LRAADLLGLKREGFRFLWVVDFPLLEWDEEEEAWTYMHHPFTSPHPEDLPLLEKDPGRVR 464

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG E+  G IR H   +  + F  +GI +E    +FG    A + G PPHGG
Sbjct: 465 ALAYDLVLNGVEVGGGSIRIHDPRLQARVFRLLGIGEEEQREKFGFFLEALEYGAPPHGG 524

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IA G+DR++ L+ G+ ++REV  FP ++   D L G+PS V  EQLRELGL +V
Sbjct: 525 IAWGLDRLLALMTGSPSIREVIAFPKNKEGKDPLTGAPSPVPEEQLRELGLMVV 578


>gi|15842110|ref|NP_337147.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|18278903|sp|Q50649|SYD_MYCTU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|13882393|gb|AAK46961.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
          Length = 594

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 241/607 (39%), Positives = 338/607 (55%), Gaps = 31/607 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANP-DSACFEIA 62
           R+H+ G L   D G  V L+GWV R R HGG+IF+D+RD  GI QVV  +P D+     A
Sbjct: 3   RSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEVLAQA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+E+ + + G+V  R     N  I TG+IE++A  + +L   E  PLP   +    E
Sbjct: 63  HRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLG--ECAPLPFQLDEPAGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRRD     I  R+R+  + R  +   +F+E  TP +T S+PEGARDFLV
Sbjct: 121 ELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGARDFLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMS
Sbjct: 181 PARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +DI+   E VL  ++     G  +     RI Y +A+RR+GTDKPDLR  + +   
Sbjct: 240 FVDAEDIIAISEEVLTELWALI--GYRIPTPIPRIGYAEAMRRFGTDKPDLRFGLELVEC 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFW 361
           T+ F  + FRVF           V A+   GG    R   D   +WA+ +G  GLAY+  
Sbjct: 298 TDFFSDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAYVL- 349

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G +   GPVAK+L       +   +  + GD  FF AG      +    AR  IA
Sbjct: 350 -VAEDGTLG--GPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARVEIA 406

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKI----------DFAHNPFTMPQGGMESLKG 471
             LG+I+ + + F W++D P +E  +E                 H+ FT P+   E    
Sbjct: 407 NRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWEDRIE 466

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +D  S+ A  YD+VCNG EI  G +R H  ++  + F+ +G+ K   E +FG L  AF  
Sbjct: 467 SDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEAEEKFGFLLEAFMF 526

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DR   LL G  ++REV  FP +    D L  +P+ ++ +Q +E G  I
Sbjct: 527 GAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESG--I 584

Query: 592 VENPKKI 598
              PK++
Sbjct: 585 DAQPKRV 591


>gi|329954874|ref|ZP_08295891.1| aspartate--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328526978|gb|EGF53989.1| aspartate--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 585

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/594 (39%), Positives = 344/594 (57%), Gaps = 17/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YR+H+CG+L +SDV   V L+GWV R R  GG+ F+D+RD YGITQ+V N   D+   E 
Sbjct: 2   YRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEVDAELCEQ 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ I G V  R ++  N NI TG IE+   ++ +L+ A   P  +    +  
Sbjct: 62  ANRLGREFVIQIVGTVNERFSK--NKNIPTGDIEIIVSELNVLNSALTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  + KN+  R ++   +R  + ++ FIE  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRAAVRKNLELRHKMTIEVRKYLDSKGFIEVETPLLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E + + +F+E   G  ++  F R+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVQQDDVIELFEGMAKYLFKEI-RGVELTEPFQRMPWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-IGGICAEGAASYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419
            R++  G V     V K       + ++     + GD    ++GD  +K      + R  
Sbjct: 352 ARIEADGTVK--SSVDKFYTQEVLQDMKAAFGAKPGDLILILSGDDVMKTRKQLNELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   WI+DFP +EW+EEE ++   H+PFT P+     L   D  +++A
Sbjct: 410 MGNQLGLRDKNKFALLWIVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+VCNG E+  G IR H +++  + F  +G + E  E +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAEEQFGFLMNAFKFGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL L IVE
Sbjct: 530 AYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSVIDQKQLDELNL-IVE 582


>gi|332161514|ref|YP_004298091.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665744|gb|ADZ42388.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 598

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/593 (39%), Positives = 350/593 (59%), Gaps = 15/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V A+   GG    R   D   ++    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQVTRKQIDEYGQFVGIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
            D +  V G+  P+AK L+    +AI  R   + GD  FF A D  K  + A  A R  +
Sbjct: 356 -DRAAGVEGVQSPIAKFLSADVLDAILARTQAESGDILFFGA-DSFKVVTDAMGALRLKV 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
            ++L +   + +   W++DFP +E ++ E  +   H+PFT P+G   E L      +I A
Sbjct: 414 GRDLALTKLDSWAPLWVVDFPMFE-DDSEGGLSAMHHPFTAPKGMSPEQLAAAPTTAI-A 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H +E+  Q F  +GI++E    +FG L  A + G PPH G+
Sbjct: 472 NAYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEEEQREKFGFLLDALKFGTPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V
Sbjct: 532 AFGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584


>gi|315586700|gb|ADU41081.1| aspartate--tRNA ligase [Helicobacter pylori 35A]
          Length = 577

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 221/589 (37%), Positives = 341/589 (57%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+    G+ +   F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHNIFKPFKRMSYKEAMENYGSDKPDLRFGLPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAVFSRSVLKELEEFVRQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  + D + GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTDAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|254672563|emb|CBA06197.1| Aspartyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 602

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/598 (39%), Positives = 353/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +     F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GGFPRMPYAEAMFYYGSDKPDMRIGLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|296129655|ref|YP_003636905.1| aspartyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296021470|gb|ADG74706.1| aspartyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 591

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 238/595 (40%), Positives = 339/595 (56%), Gaps = 28/595 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G L    +G+ V L+GWV R R HGG+ F+D+RD  GI QVV   ++    +A  
Sbjct: 3   RTHTAGSLRAEHIGTTVTLTGWVDRRRDHGGVAFVDLRDASGIAQVVVRDEA----VAHG 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP-E 122
           +R+E+VL + G V  R     N N+ TG++E+ A ++ +L+ +  LP  V     E P E
Sbjct: 59  LRAEYVLQVTGEVGRRPEGNENPNLATGEVEVVAHEVVVLNESAPLPFQVSASVDEQPGE 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R ++R+LDLRR      I  R ++  + R  +    F+E  TP LT S+PEGARDF+V
Sbjct: 119 EARLRHRYLDLRRQGPAHAIRLRAQVNRAARAVLDERGFVEVETPTLTRSTPEGARDFVV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+E S
Sbjct: 179 PARLAPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQP-EFTQLDVEAS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+QDD++   E+VL  +++    G  +     R+ Y DA+RRYGTDKPDLR  + + ++
Sbjct: 238 FVDQDDVIELAESVLTSLWDLI--GYAIPTPIPRMTYADAMRRYGTDKPDLRFGLELTDL 295

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFW 361
           TE+F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+  
Sbjct: 296 TEYFAGTPFRVFQSPY-------VGAVVQPGGASTPRRGFDAWQEWAKQRGAKGLAYV-- 346

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G +   GPVAK+++      +   +  Q GD+ FF AG   +  +    AR  I 
Sbjct: 347 TVGEDGELG--GPVAKNISDAERAGLAAAVGAQPGDAVFFAAGKATEARALLGAARLEIG 404

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQGGMESLKGNDL 474
           +  G+I+ + + F W++D P ++   E+  +          H+ FT P          D 
Sbjct: 405 RRGGLIDEDAWSFVWVVDAPLFKPTGEDDDVAVGAGAWTAVHHAFTSPTPEWVDRFEEDP 464

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A+ YD+VCNG EI  G IR H  +V  + F  +GI +   + +FG L  AFQ G P
Sbjct: 465 GAALAYAYDIVCNGNEIGGGSIRIHRRDVQQRVFQVMGIGEAEAQEKFGFLLDAFQFGAP 524

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PHGGIA G DRIV LL  + ++REV  FP S    D L G+P+ +SVEQ RE G+
Sbjct: 525 PHGGIAFGWDRIVTLLTRSDSIREVIAFPKSGGGYDPLTGAPAPISVEQRRETGV 579


>gi|167763074|ref|ZP_02435201.1| hypothetical protein BACSTE_01441 [Bacteroides stercoris ATCC
           43183]
 gi|167699414|gb|EDS15993.1| hypothetical protein BACSTE_01441 [Bacteroides stercoris ATCC
           43183]
          Length = 585

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/594 (39%), Positives = 344/594 (57%), Gaps = 17/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YR+H+CG+L +SDV   V L+GWV R R  GG+ F+D+RD YGITQ+V N   D+   E 
Sbjct: 2   YRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEVDAELCEQ 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ I G V  R ++  N NI TG IE+   ++ +L+ A   P  +    +  
Sbjct: 62  ANRLGREFVIQIVGTVNERFSK--NKNIPTGDIEIIVSELNVLNSALTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  + KN+  R ++   +R  + ++ FIE  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRAAVRKNLELRHKMTIEVRKYLDSKGFIEVETPLLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E + + +F+E   G  ++  F R+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVQQDDVIELFEGMAKYLFKEL-RGVELTEPFQRMPWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-IGGICAEGAASYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419
            R++  G V     V K       + ++     + GD    ++GD  +K      + R  
Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQEMKAAFGAKPGDLILILSGDDVMKTRKQLNELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   WI+DFP +EW+EEE ++   H+PFT P+     L   D  +++A
Sbjct: 410 MGNQLGLRDKNKFALLWIVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+VCNG E+  G IR H +++  + F  +G + E  E +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAEEQFGFLMNAFKFGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL L IVE
Sbjct: 530 AYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSVIDQKQLDELNL-IVE 582


>gi|257066406|ref|YP_003152662.1| aspartyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798286|gb|ACV28941.1| aspartyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 582

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/595 (37%), Positives = 351/595 (58%), Gaps = 18/595 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CF 59
           M   RT+ CGDL + +VG  V L GWV + R  G ++F+D+RD  GITQ+V   D    +
Sbjct: 1   MEFKRTNMCGDLRIENVGDSVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVVREDDKDNY 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A+S+  E+V+ + G V  R  E+ N +I TG IE+ A KI IL  A+  P+ +  + +
Sbjct: 61  EKARSITQEYVIEVKGRVNER--ESKNPDIATGDIEIIADKINILDKAKTPPIYIKDDDD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E++R KYR+LDLR+ ++ +N+  R+ I+ +MR  M   +F E  TP LT  +PEGARD
Sbjct: 119 VSENLRLKYRYLDLRKPSVQRNLKLRSDIVRTMREYMYNNDFTEVETPFLTKPTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+N+G FYALPQ+PQ  KQ+LM    DRYFQ+  CFRDED R++R P EF QLD+
Sbjct: 179 YLVPSRINEGKFYALPQSPQLLKQILMIGSLDRYFQVVKCFRDEDLRANRQP-EFTQLDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF +QDD++   E +L+ +F+++++ + +     R+ Y +AI  YG+DKPDLR    +
Sbjct: 238 EMSFSDQDDVIAMNEGLLKELFDKYTDYD-LKLPIDRMDYSEAITSYGSDKPDLRYGYKI 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLA 357
            +V+  F +S+F+VF+   + + G  V AI  K    N  R   D++ ++ +  G  GL+
Sbjct: 297 TDVSSVFENSDFKVFAD--NTSDGRSVRAINFKNIADNYSRKQLDKLTDFVKDYGLKGLS 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           YI +  D   +      + K L       ++ +L+M+DGD    I  D  K    A  A 
Sbjct: 355 YIKYSEDIQSS------IKKFLTDDVIAGLKDKLEMEDGD-LILIGADKNKTVLEAMGAL 407

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +A++  +I    +  CW+++FP +E++EEE +    H+PFTMP      L   +   
Sbjct: 408 RRKVAKDNDLIEKE-YALCWVVNFPMFEYSEEEDRYVSQHHPFTMPNEEDIDLLLTEPEK 466

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++   YD+V NG E+  G +R + S++  + F  + +S E ++N+FG    A Q G PPH
Sbjct: 467 VRTQAYDIVINGDEMGGGSVRINNSDLQEKVFEALKLSDEDIKNKFGFFIEALQYGTPPH 526

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR+VML     N++++  FP +Q+    L  +PS V  + L EL +++
Sbjct: 527 AGLAYGLDRLVMLFAKTDNIKDIIAFPKTQSATCPLTEAPSLVDEKALEELNIKL 581


>gi|330861469|emb|CBX71688.1| aspartyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 611

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/593 (39%), Positives = 350/593 (59%), Gaps = 15/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V A+   GG    R   D   ++    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQVTRKQIDEYGQFVGIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
            D +  V G+  P+AK L+    +AI  R   + GD  FF A D  K  + A  A R  +
Sbjct: 356 -DRAAGVEGVQSPIAKFLSADVLDAILARTQAESGDILFFGA-DSFKVVTDAMGALRLKV 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
            ++L +   + +   W++DFP +E ++ E  +   H+PFT P+G   E L      +I A
Sbjct: 414 GRDLALTKLDSWAPLWVVDFPMFE-DDSEGGLSAMHHPFTAPKGMSPEQLAAAPTTAI-A 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H +E+  Q F  +GI++E    +FG L  A + G PPH G+
Sbjct: 472 NAYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEEEQREKFGFLLDALKFGTPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V
Sbjct: 532 AFGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584


>gi|254805506|ref|YP_003083727.1| Aspartyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254669048|emb|CBA07519.1| Aspartyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 602

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/598 (39%), Positives = 353/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +     F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GGFPRMPYAEAMFYYGSDKPDMRIGLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   ++GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAENGDIIFFGA-DKAKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|237736639|ref|ZP_04567120.1| aspartyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229420501|gb|EEO35548.1| aspartyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 598

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 242/596 (40%), Positives = 346/596 (58%), Gaps = 16/596 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60
           YRTH+ G+L   ++G  V LSGWV   R  GG+ F+D+RD  G TQVV + D A     E
Sbjct: 3   YRTHNLGELRKENIGQTVTLSGWVDTTRDLGGLTFVDLRDREGKTQVVFDIDVAPKDVVE 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
            A+ +R+E V+ + G V  R ++  N NI TG+IE+ A ++ IL+  + LP  + G E  
Sbjct: 63  QAQKLRNEAVIRVVGTVRERHSK--NMNIPTGEIEVFATELTILNNCDVLPFQITGTEDN 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+IR KYR+LD+RR  +  N+  R ++I ++R  M  E FI+  TP+L  S+PEGARD
Sbjct: 121 LNENIRLKYRYLDIRRPKMLNNLRMRHKMIMAIRNYMDKEGFIDVDTPLLNKSTPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP R+N G+FYALPQ+PQ +KQLLM +G +RYFQIA CFRDED R+DR   EF QLD+
Sbjct: 181 FLVPCRINPGTFYALPQSPQLFKQLLMIAGVERYFQIAKCFRDEDLRADR-QFEFTQLDV 239

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVE DD++NT+E + + VF   + G      F R+ Y +A+ R+G+DKPD+R  + +
Sbjct: 240 EMSFVEMDDVMNTIEGLAKNVFTAIT-GEVADYKFPRMPYAEAMARFGSDKPDVRFGVEL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA-RSQGQPGLAY 358
            ++TE   +  F+ F  +       +    P      +R       E A R  G  G+AY
Sbjct: 299 KDLTEIAKNCGFKAFKDVADNGGIIKCITAPKAFEKFSRKVLGEYEEHAKRYFGAKGMAY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
           I  ++ E G +    P+AK  +    +AI  + +   GD    IA D  K    A  A R
Sbjct: 359 I--KIAEDGAIT--SPIAKFFSEEEMKAIIAKAEANPGDVILIIA-DKAKVVYGALGAMR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLS 476
             I +EL +IN + F+F W++DFP + ++EEE +    H+PFT +    MES  G     
Sbjct: 414 LRIGKELDLINNDEFKFLWVVDFPMFTYDEEEGRYKAEHHPFTSIKAEDMESFLGGQTEG 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I+   YD+V NGFEI  G IR    E+  + F  +G+S E    +FG    AF+ G PPH
Sbjct: 474 IRTNTYDMVLNGFEIGGGSIRIFNPEIQNKVFERLGLSYEEAREKFGFFVDAFKYGAPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GG+A GIDR +M++L   ++REV  FP +     L+  +P+ V  EQL EL + + 
Sbjct: 534 GGLAFGIDRWLMVMLKEASIREVIPFPKTNKGQCLMSEAPNFVDKEQLDELNIAVT 589


>gi|269302446|gb|ACZ32546.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 584

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 230/597 (38%), Positives = 342/597 (57%), Gaps = 22/597 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
           +YRTH C +L  + +G  V+L+GWVHR R HGG++F+D+RD +GITQ+V   D      +
Sbjct: 2   KYRTHRCNELTSNHIGENVQLAGWVHRYRNHGGVVFIDLRDRFGITQIVCREDEQPELHQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
              +VRSEWVL + G V  R A   N N+ TG IE+     E+LS ++ LP  +  +   
Sbjct: 62  RLDAVRSEWVLSVRGKVCPRLAGMENPNLATGHIEVEVASFEVLSKSQNLPFSIADDHIN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LD+RR  + + ++ R +++ + R  M A+ F E  TP+L  S+PEGARD
Sbjct: 122 VNEELRLEYRYLDMRRGDIIEKMLCRHQVMLACRNFMDAQGFTEIVTPVLGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  G FYALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D+
Sbjct: 182 YLVPSRIYPGKFYALPQSPQLFKQLLMVGGLDRYFQIATCFRDEDLRADRQP-EFAQIDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF +  D+   +E ++  +F   + G  +     ++ Y +A   YGTDKPDLR  + +
Sbjct: 241 EMSFGDTQDLFPIIEQLVATLFA--TQGIEIPLPLAKMTYQEAKDSYGTDKPDLRFDLKL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +  ++   S F +F   L+     + + +P  G   +R   D   E+ +  G  GL   
Sbjct: 299 KDCRDYAKRSSFSIFLDQLAHGGTIKGFCVPG-GATMSRKQLDGYTEFVKRYGAMGLV-- 355

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            W  ++ G VA    +AK ++      +    D +D D    IA       S A  + +H
Sbjct: 356 -WIKNQEGKVA--SNIAKFMDEEVFHELFAYFDAKDQDILLLIAA----LESVANQSLDH 408

Query: 420 ----IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
               IA+E  + + N + F WI DFP +    E+ KI   H+PFT P      L   D L
Sbjct: 409 LRRLIAKERELYSDNQYNFVWITDFPLFSL--EDGKIVAEHHPFTAPLEEDIPLLETDPL 466

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           ++++  YDLV NG+EIASG  R H  ++  Q F+ + +S E ++ +FG   +A   G PP
Sbjct: 467 AVRSSSYDLVLNGYEIASGSQRIHNPDLQSQIFTILKMSPESIQEKFGFFIKALSFGTPP 526

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           H GIA G+DR+VM+L  A+++REV  FP +Q   DL+M +PS +   QL+EL +++ 
Sbjct: 527 HLGIALGLDRLVMVLTAAESIREVIAFPKTQKASDLMMNAPSEIMSSQLKELSIKVA 583


>gi|167746644|ref|ZP_02418771.1| hypothetical protein ANACAC_01355 [Anaerostipes caccae DSM 14662]
 gi|317471472|ref|ZP_07930824.1| aspartyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|167653604|gb|EDR97733.1| hypothetical protein ANACAC_01355 [Anaerostipes caccae DSM 14662]
 gi|316901087|gb|EFV23049.1| aspartyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 599

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 234/595 (39%), Positives = 352/595 (59%), Gaps = 15/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEI 61
           R+H C ++G  ++G  V + GWV + R  G +IF+D+RD  G+ Q+V + D+     +E 
Sbjct: 10  RSHRCTEVGRENIGEKVTVMGWVQKRRNLGSLIFVDLRDRSGLLQLVFDEDTLSGEDYEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+R+E+V+   G V  RSA  +N N+ TG IE+    + ILS ++  P PV  E+   
Sbjct: 70  ANSLRNEYVIAAAGEVQKRSA-AVNENLKTGDIEIKVTDLRILSESKTPPFPVDAEQTVK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  L KN++ R+++  + R  +  E F+E  TPIL  S+PEGARD+L
Sbjct: 129 DELRLKYRYLDLRRPNLQKNLLVRSQVTKAARDFLAEEGFLEIETPILGKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G+FY LPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGNFYGLPQSPQLFKQLLMCSGVDRYYQIAKCFRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L+ VF+E  + + V     R+ Y +A+ R+G+DKPD R  + + N
Sbjct: 248 SFVDVDDVIDVNERLLKKVFKEVLDVD-VQIPMKRLTYQEAMDRFGSDKPDTRFGMELIN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360
           V+E     +F VF   L    G  V  + A+G G   R   D   ++A+  G  GLAYI 
Sbjct: 307 VSETVKDCDFMVFKGALE--NGGSVRGLNAEGLGDLGRKKIDAFVDFAKEFGAKGLAYI- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +L + G+V      AK +      A+   +  + GD   F A           + R  I
Sbjct: 364 -QLKQDGSVK--SSFAKFMKEEEMTALIDAMRGKPGDLLLFAADKDSVVYDVLGNLRLEI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479
            ++  +I+ + + F W+ +FP  EWNEE+ +    H+PFTMP +  +E ++  +   ++A
Sbjct: 421 GKKYEMIDESLYNFLWVTEFPLLEWNEEQNRYTAMHHPFTMPMEEDLEYIE-TEPGRVRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G +R H +++    F  +G S+E    RFG L  AFQ G+PPH G+
Sbjct: 480 KAYDIVLNGTELGGGSVRIHRNDIQKAMFKALGFSEEDANERFGFLLEAFQYGVPPHAGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR+VM + G  ++R+V  FP  ++   L+  +P  V  EQL ELG+ + EN
Sbjct: 540 AYGLDRLVMWMTGEDSIRDVIAFPKVKDASCLMTQAPGGVDTEQLDELGIDLKEN 594


>gi|84496698|ref|ZP_00995552.1| aspartyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84383466|gb|EAP99347.1| aspartyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 620

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/609 (38%), Positives = 339/609 (55%), Gaps = 32/609 (5%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH  G L    +S  G  V L+GWV + R HGG+ F+D+RD  G+ QVVA  D      
Sbjct: 3   RTHEAGTLTADHISQAGQTVTLTGWVAKRRDHGGVAFIDLRDASGVVQVVAR-DEVLTGA 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +R+E+ + + G V++R+   +NA + TG IE+ A  IE+L+ +  LP  +       
Sbjct: 62  AHDLRAEFCIKVTGEVVARTEANVNAELPTGAIEVVASAIEVLAPSAPLPFQIDERTTVG 121

Query: 122 ESIRFKYRFLDLRR---DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  R K+R+LDLRR    +    +  R+++  + R  +   +F+E  TP LT S+PEGAR
Sbjct: 122 EEARLKHRYLDLRRPGKSSAGTALRLRSKVNAAARRVLEGRDFVEIETPTLTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD
Sbjct: 182 DFLVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVEQDD++  ME+VL  +++       +     R+ Y +A+RR+G+DKPDLR  + 
Sbjct: 241 IEMSFVEQDDVIELMEDVLAEMWKLIDV--EIPRPIPRMTYAEAMRRFGSDKPDLRMGLE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           +   T++F  + FRVF           V A+   GG    R   D   +WA+ +G  GLA
Sbjct: 299 LVECTDYFSETTFRVFQAPY-------VGAVVMPGGASQPRKKLDAWQDWAKQRGAKGLA 351

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+   + E G + G  PVAK+L       +   +  + GD  FF AGD     +    AR
Sbjct: 352 YVL--VTEDGTLGG--PVAKNLTETEVAGLAEHVGAKAGDCIFFAAGDAKSSRALLGAAR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEE-KKIDFA---------HNPFTMPQGGME 467
             I Q   +I+ + F F W++D P +E + +     D A         H+ FT P+    
Sbjct: 408 LEIGQRGDLIDKDAFAFTWVVDAPMFEPSSDAVASGDVAVGAGAWTAVHHAFTGPKPEFA 467

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D  S  A+ YD+VCNG E+  G IR H  +V  + F  +G++ E  + +FG L  
Sbjct: 468 DTFDTDPGSALAYAYDIVCNGNELGGGSIRIHRRDVQERVFKVMGLTDEESQEKFGFLLD 527

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF  G PPHGGIA G+DRI  LL G  ++R+V  FP S    D L  +P+ ++ EQ +E 
Sbjct: 528 AFAFGAPPHGGIAVGMDRICALLAGTDSIRDVIAFPKSGGGYDPLTAAPAPITPEQRKEA 587

Query: 588 GLRIVENPK 596
           G+     PK
Sbjct: 588 GVDAKPEPK 596


>gi|298736310|ref|YP_003728836.1| aspartyl-tRNA synthetase (AspS) [Helicobacter pylori B8]
 gi|298355500|emb|CBI66372.1| aspartyl-tRNA synthetase (AspS) [Helicobacter pylori B8]
          Length = 577

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/589 (37%), Positives = 341/589 (57%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKSVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+    G+ +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQAIFKAI--GHDISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F  S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFRDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E V+ +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEVQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSHSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|317177552|dbj|BAJ55341.1| aspartyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 577

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/589 (37%), Positives = 341/589 (57%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYERALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+    G+ +S  F R+ Y +A+  YG+DKPDLR  + +  V E
Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHHISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGE 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|72383128|ref|YP_292483.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|72002978|gb|AAZ58780.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 612

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 241/607 (39%), Positives = 353/607 (58%), Gaps = 36/607 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R  +CG+L  S + + V+L GWV R R HGG+IF+D+RD  G  Q+  +PD     F IA
Sbjct: 8   RNKTCGELRASAISANVQLCGWVDRRRDHGGVIFIDLRDRSGTIQITVDPDQGQDLFSIA 67

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119
           +S+R+E VL I+GLV +R  E IN  I TG++E+ A+ I+IL +V   LP  V    E  
Sbjct: 68  ESLRNETVLQINGLVRARPDEAINTKIPTGEVEVLAKNIKILNTVTSTLPFSVSIHDEES 127

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR K+R+LDLRR+ ++ N+  R   + + R  +  E FIE  TPILT S+PEGARD
Sbjct: 128 VKEEIRLKHRYLDLRRERMNNNLRLRHNTVKAARSFLENEGFIEVETPILTRSTPEGARD 187

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV  G F+ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 188 YLVPSRVCGGEFFALPQSPQLFKQLLMVGGVERYYQVARCFRDEDLRADRQP-EFTQLDI 246

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+E+ +I+   E ++  ++++   G  +   F R+ + +A+ R+GTD+PD R  + +
Sbjct: 247 EMSFMEEKEIIELNEKLIVSIWKKIK-GIDLQTPFPRMTWQEAMDRFGTDRPDTRYGMEL 305

Query: 300 HNVTEHFVHSEFRVFS---------KILSVNPGYEVWA-IPAKGGGGNRAFCDRMNEWAR 349
            N ++ F  S F+VFS         K +++  G  + + +  K GG      D  +E A+
Sbjct: 306 VNTSDLFSKSGFKVFSNAISSGGCVKCITIEDGNNLISNVRIKPGG------DIFSE-AQ 358

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
             G  GLA+I  R+ +   V  +G +  +L     + + ++   + GD   F AG P   
Sbjct: 359 KAGAGGLAFI--RVRDDKEVDTIGAIKDNLTTSQIKELLLKTQAKPGDLILFGAG-PTNI 415

Query: 410 CSFAAD-ARNHIAQELGIINCNCFE----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ- 463
            +   D  R  IA++L II+ N  +    F W+ DFP +E+N +E +++  H+PF  P+ 
Sbjct: 416 VNRTLDRVRQFIAKDLKIISDNELKTQWNFLWVTDFPMFEFNSDENRLEAIHHPFCAPKP 475

Query: 464 ---GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
              G  ESL  + L +  A  YDLV NG EI  G +R H SE+       +G+SK   E 
Sbjct: 476 EDIGESESLWKDKLPNSNAQAYDLVLNGLEIGGGSLRIHNSELQKTVLEVIGLSKNEAEE 535

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
           +FG L  A   G PPHGGIA G+DRIVMLL    ++R+   FP +Q     +  +P+ V 
Sbjct: 536 QFGFLIDALAMGAPPHGGIAFGLDRIVMLLANEDSIRDTIAFPKTQQARCSMAKAPANVE 595

Query: 581 VEQLREL 587
            +QL +L
Sbjct: 596 NKQLEDL 602


>gi|293395804|ref|ZP_06640086.1| aspartate-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291421741|gb|EFE94988.1| aspartate-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 594

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/593 (39%), Positives = 343/593 (57%), Gaps = 11/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    F+ A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQKTAFDKAF 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  +EI++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQIVGTVRARPDSQINKDMATGEVEVFAHGLEIINRSE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMADRLKARAKITSFVRRFMDQHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEQLVRELWQEVKGVDL--GDFPIMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V AI   GG    R   D    +    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAAIRVPGGAQLTRKQIDEYGAFVNIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK LN    EA+  R + Q GD  FF A D  K  + A  A R  + 
Sbjct: 356 DRAAGLEGVQSPIAKFLNAEVLEAVLARSEAQTGDILFFGA-DSHKIVTDAMGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +   + +   W++DFP +E ++ E  +   H+PFT P+        ND  S  A  
Sbjct: 415 RDLQLTRLDAWAPLWVVDFPMFE-DDGEGGLAAMHHPFTAPRDMAPEALANDPTSAIANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H SE+    F  +GI++     +FG L  A + G PPH G+A 
Sbjct: 474 YDMVVNGYEVGGGSVRIHRSEMQQTVFGILGINEHEQREKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V+ 
Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPAALQELAISVVKK 586


>gi|269468785|gb|EEZ80389.1| aspartyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 584

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 232/590 (39%), Positives = 354/590 (60%), Gaps = 16/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG+L   ++   V L GWV+R R HGG+IFLD+RD  GI QVV NP+    FEIA+
Sbjct: 2   RTDYCGELNKDNIDQTVELCGWVNRRRDHGGVIFLDMRDKRGIAQVVINPEHKKTFEIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL I G V++R    IN  + TG+IE+ A +IEIL+ ++ +P  +    +  E 
Sbjct: 62  GVRSEFVLKITGKVIARGEGLINPKLATGEIEVVADEIEILNTSKPIPFQI-DSTDTSEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRRD + + +  R+++ + MR  M   +F++  TP LT ++PEGARD+LVP
Sbjct: 121 VRLKYRYLDLRRDEMQQRLRLRSKVTHFMREFMDNNDFLDIETPFLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM SGF+RY+QI  CFRDED R+DR P EF QLD+E SF
Sbjct: 181 SRTHPGEFFALPQSPQLFKQLLMMSGFERYYQIVKCFRDEDLRADRQP-EFTQLDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++D+I+  ME + RG+F+   + + +   F  I Y DA+  YG D+PD+R  + + ++ 
Sbjct: 240 MDEDEIMAMMEEMTRGMFKSVIDVD-LPAEFPTITYADAMSLYGVDRPDMRISMQITDMD 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           E     +F+VFS   + +    V A+   GG   +R   D+  ++    G  GLAYI  +
Sbjct: 299 ELMQGVDFKVFSGPAN-DVESRVAALRVPGGATISRKNIDKYTKYVSIYGAKGLAYI--K 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNHIA 421
           L+E G  +   P+ K L    T  +      Q GD  FF   D  K  + A  + R  +A
Sbjct: 356 LNEDGPAS---PILKFLGDDVTAKVIEMTGAQTGDIIFF-GADKTKIVNEALGNLREQLA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L + +   +   W++DFP ++ +  +  ++  H+PFT P    ++L+     ++ +  
Sbjct: 412 KDLDLFDKQ-WAPIWVVDFPMFDVD-GDGSLNAIHHPFTAPSVDAKTLESTADTAL-SRA 468

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR H  E+       +GIS +  +++FG L  A + G PPHGG+A 
Sbjct: 469 YDLVINGSEVGGGSIRIHQVEMQQTVLKLLGISDDEAKDKFGFLLDALEYGCPPHGGMAF 528

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VM++ G  ++REV  FP +Q    LL  +P++V  + LREL +++
Sbjct: 529 GLDRLVMIMTGTDSIREVIAFPKTQTAACLLTNAPASVPRKVLRELSVKV 578


>gi|257466069|ref|ZP_05630380.1| aspartyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917225|ref|ZP_07913465.1| aspartyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691100|gb|EFS27935.1| aspartyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 594

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/585 (40%), Positives = 349/585 (59%), Gaps = 20/585 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           YR+H+ G+L   ++G  V LSGWV   R  GG+ F+D+RD  G TQ+V + D       E
Sbjct: 3   YRSHNLGELRKENIGQVVTLSGWVDTKRDLGGLTFIDLRDREGKTQIVFDIDYTNKEIIE 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
            A+ +R+E V+ + G V  R+++  N NI TG+IE+  +++E+L+  + LP  + G E  
Sbjct: 63  TAQKLRNEAVIKVVGEVKERASK--NLNIPTGEIEVFVKELEVLNQCDVLPFQITGTEEN 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+IR KYR+LD+RR  + +N+  R R+I ++R  M    F++  TPILT S+PEGARD
Sbjct: 121 LSENIRLKYRYLDIRRPKMIQNLKMRHRMIMAIRNYMDQAGFLDVDTPILTKSTPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR+N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD+
Sbjct: 181 FLVPSRINGGTFYALPQSPQIFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLDV 239

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV QDD++N +E + + VF+  + G   +  F R+ Y  A+  YG+DKPDLR  + +
Sbjct: 240 EMSFVTQDDVMNEIEGLAKYVFKNVT-GEEANYTFERMPYAIAMGEYGSDKPDLRFEVKL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQ-GQPGL 356
            ++++    S F+ FS   +V  G  V AI  P      +R       ++A+   G  G+
Sbjct: 299 KDLSDVVAKSSFKAFSA--TVENGGIVKAIVAPKAFEKFSRKVLGEYEDYAKQYFGAKGM 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AYI  ++ E+G ++   P+AK       +AI  R     GD    IA D  K    A  A
Sbjct: 357 AYI--KIAENGEIS--SPIAKFFQEDEMKAILERTGAGAGDVVLIIA-DRAKIVHAALGA 411

Query: 417 -RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDL 474
            R  + +ELG+I+ N ++F W++DFP +E++EEE +    H+PFT + +  ME       
Sbjct: 412 LRLRVGKELGLIDMNSYKFLWVVDFPMFEYDEEEGRYKAEHHPFTSIKEEDMEKFLAGQT 471

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +I+   YDLV NG EI  G IR   +E+  + F  + +S E  + +FG    AF+ G P
Sbjct: 472 DNIRTNTYDLVLNGSEIGGGSIRISNTELQAKVFERLSLSPEEAKEKFGFFLDAFKYGAP 531

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
           PHGG+A GIDR +M++L  +++R+V  FP +     L+  +P  V
Sbjct: 532 PHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPGKV 576


>gi|297379816|gb|ADI34703.1| aspartyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 577

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/589 (37%), Positives = 340/589 (57%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+    G+ VS  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHNVSKPFKRMPYKEAMENYGSDKPDLRFGLPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAVFSRSVLKELEEFVRQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGV---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|97196794|sp|Q46I98|SYD_PROMT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 606

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 241/607 (39%), Positives = 353/607 (58%), Gaps = 36/607 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R  +CG+L  S + + V+L GWV R R HGG+IF+D+RD  G  Q+  +PD     F IA
Sbjct: 2   RNKTCGELRASAISANVQLCGWVDRRRDHGGVIFIDLRDRSGTIQITVDPDQGQDLFSIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119
           +S+R+E VL I+GLV +R  E IN  I TG++E+ A+ I+IL +V   LP  V    E  
Sbjct: 62  ESLRNETVLQINGLVRARPDEAINTKIPTGEVEVLAKNIKILNTVTSTLPFSVSIHDEES 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR K+R+LDLRR+ ++ N+  R   + + R  +  E FIE  TPILT S+PEGARD
Sbjct: 122 VKEEIRLKHRYLDLRRERMNNNLRLRHNTVKAARSFLENEGFIEVETPILTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV  G F+ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YLVPSRVCGGEFFALPQSPQLFKQLLMVGGVERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+E+ +I+   E ++  ++++   G  +   F R+ + +A+ R+GTD+PD R  + +
Sbjct: 241 EMSFMEEKEIIELNEKLIVSIWKKIK-GIDLQTPFPRMTWQEAMDRFGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFS---------KILSVNPGYEVWA-IPAKGGGGNRAFCDRMNEWAR 349
            N ++ F  S F+VFS         K +++  G  + + +  K GG      D  +E A+
Sbjct: 300 VNTSDLFSKSGFKVFSNAISSGGCVKCITIEDGNNLISNVRIKPGG------DIFSE-AQ 352

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
             G  GLA+I  R+ +   V  +G +  +L     + + ++   + GD   F AG P   
Sbjct: 353 KAGAGGLAFI--RVRDDKEVDTIGAIKDNLTTSQIKELLLKTQAKPGDLILFGAG-PTNI 409

Query: 410 CSFAAD-ARNHIAQELGIINCNCFE----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ- 463
            +   D  R  IA++L II+ N  +    F W+ DFP +E+N +E +++  H+PF  P+ 
Sbjct: 410 VNRTLDRVRQFIAKDLKIISDNELKTQWNFLWVTDFPMFEFNSDENRLEAIHHPFCAPKP 469

Query: 464 ---GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
              G  ESL  + L +  A  YDLV NG EI  G +R H SE+       +G+SK   E 
Sbjct: 470 EDIGESESLWKDKLPNSNAQAYDLVLNGLEIGGGSLRIHNSELQKTVLEVIGLSKNEAEE 529

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
           +FG L  A   G PPHGGIA G+DRIVMLL    ++R+   FP +Q     +  +P+ V 
Sbjct: 530 QFGFLIDALAMGAPPHGGIAFGLDRIVMLLANEDSIRDTIAFPKTQQARCSMAKAPANVE 589

Query: 581 VEQLREL 587
            +QL +L
Sbjct: 590 NKQLEDL 596


>gi|226306467|ref|YP_002766427.1| aspartyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|259511868|sp|C0ZZA3|SYD_RHOE4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226185584|dbj|BAH33688.1| aspartyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 602

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 241/596 (40%), Positives = 329/596 (55%), Gaps = 28/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L        V L+GWV R R HGG+IF+D+RD  G+ QVV        E A  
Sbjct: 3   RTHLAGSLRPEQAEQTVTLTGWVARRRDHGGVIFIDLRDASGVAQVVFRAGDVA-EQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  I TG IE++A ++E+L+  E  PLP   + +  E  
Sbjct: 62  LRAEYCVRVTGTVEVRPEGNQNFEIPTGAIEVNATELEVLN--ESAPLPFQLDDQVGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+     I  R+++  + R  +    F+E  TP LT S+PEGARDFLVPS
Sbjct: 120 RLKYRYLDLRREGPGSAIRLRSKVSAAARGVLAHHEFVEVETPTLTRSTPEGARDFLVPS 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EM+FV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQP-EFTQLDIEMAFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            QDDI+   E +L  +++    G+ +     R+ Y +A+RRYG+DKPDLR  I +    +
Sbjct: 239 NQDDIILLAEEILTALWKLV--GHEIKTPIDRMTYTEAMRRYGSDKPDLRFDIELVECMD 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 297 FFKDTTFRVFQAEY-------VGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPVAK+L     E +   +  Q GD  FF AG      +    AR  IA++
Sbjct: 348 GEDGTLG--GPVAKNLTDAEREGLAAHVGAQPGDCVFFAAGATKPMRALLGAARGEIARK 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473
             +I+ + + F WI+D P +E   +     D A         H+ FT P+         D
Sbjct: 406 KDLIDPDAWAFVWIVDAPMFEPTADATASGDVALGHSAWTAVHHAFTSPKPEFFDTFDTD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  A+ YD+VCNG EI  G IR H  ++  + F  +GIS+E  + +FG L  AF  G 
Sbjct: 466 PDSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFKVMGISEEEAQEQFGFLLDAFAFGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGGIA G DRI  LL G  ++REV  FP S    D L  +P+ +S +Q +E G+
Sbjct: 526 PPHGGIAFGWDRITALLAGMDSIREVIAFPKSGGGVDPLTDAPAPISAQQRKESGI 581


>gi|294789544|ref|ZP_06754779.1| aspartate--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294482481|gb|EFG30173.1| aspartate--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 602

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 232/596 (38%), Positives = 348/596 (58%), Gaps = 14/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F++A 
Sbjct: 2   RTNYCGLINEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFKLAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S RSE+VL I G V +R   T N  +I+G+IE+ A++IEIL+ A   P  +  E    E+
Sbjct: 62  SARSEFVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEILNTAATPPFQI-DEENISET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R + R +DLRR  + +N+  R ++   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLQNRVIDLRRPYMQRNLKLRYQVAMGVRRYLDVQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHAGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I++  E + + VF++    +    +F R+ Y DA+  YG+DKPD+R  +    +T
Sbjct: 240 LTENEIMDITEGMAKQVFKDALGVDL--GDFPRMQYSDAMFYYGSDKPDMRISLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI---- 359
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADMKNGRVVALRVPNGAKFSRKEIDEYTQFVGIYGAKGLAYIKVND 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              L    N     P+ K L+    + I  R   ++GD  FF   D  K  + A  A R 
Sbjct: 358 VTNLSNGENSGLQSPIVKFLSENVLKEIIARTGAENGDIIFF-GADKEKIVNEAIGALRI 416

Query: 419 HIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            I +E G+ N    + ++  W++DFP +E++E+  +    H+PFT P+ G E L  +   
Sbjct: 417 KIGKEHGLENGYFVDEWKPLWVVDFPMFEYDEDADRYVAVHHPFTAPKEGHEDLMVSAPE 476

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              A  YD+V NG+EI  G IR H +E+  + F+ + I+ E  + +FG L    + G PP
Sbjct: 477 KCLARAYDMVLNGWEIGGGSIRIHRAEIQEKVFAALKITPEEQQEKFGFLLDNLKFGAPP 536

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG+A G+DR+V L+  A+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 537 HGGLAFGLDRLVTLMTSAESIRDVIAFPKTQRAQCLLTNAPNSVDEKQLRELSLRL 592


>gi|317179021|dbj|BAJ56809.1| aspartyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 577

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 221/589 (37%), Positives = 341/589 (57%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKTRLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+    G+ +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHNISKPFKRMPYKEAMENYGSDKPDLRFGLHLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGV---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|168204884|ref|ZP_02630889.1| aspartyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168208633|ref|ZP_02634258.1| aspartyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170663642|gb|EDT16325.1| aspartyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170713220|gb|EDT25402.1| aspartyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 597

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/595 (39%), Positives = 347/595 (58%), Gaps = 17/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R   CGD   S +G  V + GWV R R  GG+ F+D+RD  GI QVV N D      E A
Sbjct: 10  RNIMCGDARESHIGQKVTVMGWVQRNRNLGGLQFIDLRDREGILQVVFNDDLGEEILEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           KS+R E+ + + G ++ R  E++N N+ TG +EL A++++ILS ++  P+ +  + +  E
Sbjct: 70  KSIRPEYCIAVTGEIVKR--ESVNPNMPTGMVELKAEELKILSESDTPPIYIKEDLDAAE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           SIR KYR+LDLRR  +      R +   ++R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 128 SIRLKYRYLDLRRPDMQNIFKIRHKTTKAIRDYLDQNGFLEMETPILTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R++R P EF Q+D+EMS
Sbjct: 188 PSRNYPGMFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRANRQP-EFTQVDLEMS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDD++   E +++ VF+E   G  V     R+ + DA+ +YG+DKPDLR  + + N+
Sbjct: 247 FVEQDDVMALNEGLIKHVFKEVL-GVDVKTPIKRMTFKDAMEKYGSDKPDLRFGMEITNL 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++      F+VF+   +V  G  V  +  +GG    R   DR+ E+ ++    GLA+I  
Sbjct: 306 SDVVKECGFKVFTD--AVANGGSVRGLCLEGGASMGRKDIDRLGEFVKTFKAKGLAWI-- 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +L E G  +   P+AK  +      I   +  + GD    +A           + R  ++
Sbjct: 362 QLKEEGVKS---PIAKFFSEEELNKIIETMGAKTGDLILIVADKNSVVLKALGELRLELS 418

Query: 422 QELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           ++  ++     F F WI +F   E++EEE +   AH+PFTMP          D   ++A 
Sbjct: 419 RKFDLVKDKSEFNFTWITEFDLLEYDEEEGRYFAAHHPFTMPMDEDIQYLDTDPGRVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H +++  + F  +G ++E    RFG L  AF+ G PPHGG+A
Sbjct: 479 AYDLVLNGEELGGGSIRIHDTKLQEKMFEVLGFTQESAWERFGFLLEAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR++M L G +N+++V  FP +QN FC  L  +P+ V  EQL+ELG+  ++ 
Sbjct: 539 FGLDRMIMFLAGTENIKDVITFPKNQNAFC-YLTEAPNIVDEEQLKELGIETIKK 592


>gi|18310915|ref|NP_562849.1| aspartyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|110801288|ref|YP_696612.1| aspartyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168214147|ref|ZP_02639772.1| aspartyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|168215558|ref|ZP_02641183.1| aspartyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|169343591|ref|ZP_02864590.1| aspartyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|24212407|sp|Q8XJ28|SYD_CLOPE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123344612|sp|Q0TP28|SYD_CLOP1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|18145597|dbj|BAB81639.1| aspartate-tRNA ligase [Clostridium perfringens str. 13]
 gi|110675935|gb|ABG84922.1| aspartyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|169298151|gb|EDS80241.1| aspartyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|170714389|gb|EDT26571.1| aspartyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|182382184|gb|EDT79663.1| aspartyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 597

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/595 (39%), Positives = 347/595 (58%), Gaps = 17/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R   CGD   S +G  V + GWV R R  GG+ F+D+RD  GI QVV N D      E A
Sbjct: 10  RNIMCGDARESHIGQKVTVMGWVQRNRNLGGLQFIDLRDREGILQVVFNDDLGEEILEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           KS+R E+ + + G ++ R  E++N N+ TG +EL A++++ILS ++  P+ +  + +  E
Sbjct: 70  KSIRPEYCIAVTGEIVKR--ESVNPNMPTGMVELKAEELKILSESDTPPIYIKEDLDAAE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           SIR KYR+LDLRR  +      R +   ++R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 128 SIRLKYRYLDLRRPDMQNIFKIRHKTTKAIRDYLDQNGFLEMETPILTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R++R P EF Q+D+EMS
Sbjct: 188 PSRNYPGMFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRANRQP-EFTQVDLEMS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDD++   E +++ VF+E   G  V     R+ + DA+ +YG+DKPDLR  + + N+
Sbjct: 247 FVEQDDVMALNEGLIKHVFKEVL-GVDVKTPIKRMTFKDAMEKYGSDKPDLRFGMEITNL 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++      F+VF+   +V  G  V  +  +GG    R   DR+ E+ ++    GLA+I  
Sbjct: 306 SDVVKECGFKVFTD--AVANGGSVRGLCLEGGASMGRKDIDRLGEFVKTFKAKGLAWI-- 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +L E G  +   P+AK  +      I   +  + GD    +A           + R  ++
Sbjct: 362 QLKEEGVKS---PIAKFFSEEELNKIIETMGAKTGDLILIVADKNSVVLKALGELRLELS 418

Query: 422 QELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           ++  ++     F F WI +F   E++EEE +   AH+PFTMP          D   ++A 
Sbjct: 419 RKFDLVKDKSEFNFTWITEFDLLEYDEEEGRYFAAHHPFTMPMDEDIKYLDTDPGRVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H +++  + F  +G ++E    RFG L  AF+ G PPHGG+A
Sbjct: 479 AYDLVLNGEELGGGSIRIHDTKLQEKMFEVLGFTQESAWERFGFLLEAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR++M L G +N+++V  FP +QN FC  L  +P+ V  EQL+ELG+  ++ 
Sbjct: 539 FGLDRMIMFLAGTENIKDVITFPKNQNAFC-YLTEAPNIVDEEQLKELGIETIKK 592


>gi|227549176|ref|ZP_03979225.1| aspartyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078736|gb|EEI16699.1| aspartyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 602

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 245/607 (40%), Positives = 343/607 (56%), Gaps = 32/607 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  GDL     G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +S   E A  
Sbjct: 3   RTHLAGDLRKELDGQTVTLTGWVSRRRDHGGVIFIDLRDRSGLAQVVFR-ESEVAEAAHD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGEREYPE 122
           +RSE+ + + G+V  R   + N N+ +G+IE++A ++E+L+ +  LP  V  F   E  E
Sbjct: 62  LRSEYCIKVTGVVEPRPEGSANPNLASGEIEVNAVELEVLNKSAALPFQVEDFSSNEVGE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR+     +  R+    + R  +   +F E  TP LT S+PEGARDFLV
Sbjct: 122 ETRLKYRYLDLRRERQAAALRLRSDANRAAREVLSRHDFTEIETPTLTRSTPEGARDFLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R+  GS+YALPQ+PQ +KQLLM +G +RYFQIA C+RDED R+DR P EF QLD+E S
Sbjct: 182 PARLRPGSWYALPQSPQLFKQLLMVAGMERYFQIARCYRDEDFRADRQP-EFTQLDIEAS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+QDDI+   E +L  +++    G  +S    R+ Y +A+ +YG+DKPDLR  I + + 
Sbjct: 241 FVDQDDIIELAEEILVELWKLI--GVEISTPIPRMTYAEAMEKYGSDKPDLRFGIELVDC 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFW 361
           TE F  + FRVF           V A+  +GG    R   D   EWA+ +G  GLAYI  
Sbjct: 299 TEFFKDTPFRVFQNEY-------VGAVVMEGGASQPRRQLDAWQEWAKQRGAKGLAYILV 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D  G ++  GPVAK++      +I   +  + GD  FF AGD     +    AR  IA
Sbjct: 352 QKD--GELS--GPVAKNITDAEKASIAQHVGAKPGDCIFFAAGDTKSSRALLGAARGEIA 407

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGG-MESLK 470
           ++L +I    + F W++D P +E + +            K    H+ FT P+   +ES  
Sbjct: 408 RKLDLIKEGDWAFTWVVDAPMFEPSADATASGDVALGHSKWTAVHHAFTSPKPEYLESFD 467

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
                ++ A+ YD+VCNG EI  G IR H  +V  + F  +GI+ E  + +FG L  AF 
Sbjct: 468 SEPGEAL-AYAYDIVCNGNEIGGGSIRIHQRDVQERVFKVMGITGEETQEKFGFLLEAFA 526

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ +   Q +E G+ 
Sbjct: 527 FGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPIPTAQRKETGVD 586

Query: 591 IVENPKK 597
               PKK
Sbjct: 587 F--KPKK 591


>gi|261839556|gb|ACX99321.1| aspartyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 577

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 222/589 (37%), Positives = 340/589 (57%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAKKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+    G+ +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAI--GHDISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F  S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFRDSSNAIFSNIAQDPKNKRIKALNVKGADAVFSRSVLKELEEFVRQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  + D + GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTDAKTGDIIFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGCHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 575


>gi|182624429|ref|ZP_02952213.1| aspartyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|177910432|gb|EDT72809.1| aspartyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 597

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 236/595 (39%), Positives = 346/595 (58%), Gaps = 17/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R   CGD   S +G  V + GWV R R  GG+ F+D+RD  GI QVV N D      E A
Sbjct: 10  RNIMCGDARESHIGQKVTVMGWVQRNRNLGGLQFIDLRDREGILQVVFNDDLGEEILEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           KS+R E+ + + G ++ R  E++N N+ TG +EL A++++ILS ++  P+ +  + +  E
Sbjct: 70  KSIRPEYCIAVTGEIVKR--ESVNPNMPTGMVELKAEELKILSESDTPPIYIKEDLDAAE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           SIR KYR+LDLRR  +      R +   ++R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 128 SIRLKYRYLDLRRPDMQNIFKIRHKTTKAIRDYLDQNGFLEMETPILTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R++R P EF Q+D+EMS
Sbjct: 188 PSRNYPGMFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRANRQP-EFTQVDLEMS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDD++   E +++ VF+E   G  V     R+ + DA+ +YG+DKPDLR  + + N+
Sbjct: 247 FVEQDDVMALNEGLIKHVFKEVL-GVDVKTPIKRMTFKDAMEKYGSDKPDLRFGMEITNL 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++      F+VF+   +V  G  V  +  +GG    R   DR+ E+ ++    GLA+I  
Sbjct: 306 SDVVKECGFKVFTD--AVANGGSVRGLCLEGGASMGRKDIDRLGEFVKTFKAKGLAWI-- 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +L E G  +   P+AK         I   +  + GD    +A           + R  ++
Sbjct: 362 QLKEEGVKS---PIAKFFQEEELNKIIETMGAKTGDLILIVADKNSVVLKALGELRLELS 418

Query: 422 QELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           ++  ++     F F WI +F   E++EEE +   AH+PFTMP          D   ++A 
Sbjct: 419 RKFDLVKDKSEFNFTWITEFDLLEYDEEEGRYFAAHHPFTMPMDEDIKYLDTDPGRVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H +++  + F  +G ++E    RFG L  AF+ G PPHGG+A
Sbjct: 479 AYDLVLNGEELGGGSIRIHDTKLQEKMFEVLGFTQESAWERFGFLLEAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR++M L G +N+++V  FP +QN FC  L  +P+ V  EQL+ELG+  ++ 
Sbjct: 539 FGLDRMIMFLAGTENIKDVITFPKNQNAFC-YLTEAPNIVDEEQLKELGIETIKK 592


>gi|300727957|ref|ZP_07061335.1| aspartate--tRNA ligase [Prevotella bryantii B14]
 gi|299774799|gb|EFI71413.1| aspartate--tRNA ligase [Prevotella bryantii B14]
          Length = 586

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 223/597 (37%), Positives = 353/597 (59%), Gaps = 27/597 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YR+++CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   D A  E 
Sbjct: 2   YRSNTCGELRLSDAGKNVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEADDKALCEE 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + + G+V  R ++  N  I TG IE+ A+++++LS +   P  +  E +  
Sbjct: 62  ANKLGREFCIQVKGIVSERQSK--NNKISTGDIEIIAKELQVLSPSLTPPFTIEDETDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LD+RR+ + KN+  R R+   +R  + ++ F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDIRRNAVRKNLELRHRMTILIRNFLDSKQFMEIETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM +G DRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGIDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++N  E++ R +F+E    +       ++ + +A+++YG+DKPDLR  +    
Sbjct: 239 SFVDQDDVINLFEDMARHLFKEIRGVDI--PKMQQMTWQEAMKKYGSDKPDLRFGMEFVE 296

Query: 302 VTEHFVHSEFRVFSKILSVN----PGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQPG 355
           + +     +F VF +   +     PG   +          R   D++ ++ +SQ  G  G
Sbjct: 297 LMDVLKLGKFGVFDEAAYIGGICVPGCANYT---------RKQLDQLTDFVKSQQVGAKG 347

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAA 414
           L YI  + +E G+V     + K     +   ++  +   +GD    ++GD P K  +   
Sbjct: 348 LVYI--KYNEDGSVK--SSIDKFYTTDDLAKVKEAMGANNGDLVLILSGDKPNKTRTQLC 403

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  +   LG+++ N F+  WI+DFP +EW++EE+++   H+PFTMP      L     
Sbjct: 404 SLRLEMGNRLGLMDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHP 463

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YD VCNG E+  G +R H +++  + F  +G + E  E +FG L  AF+ G P
Sbjct: 464 EQVRAKAYDFVCNGIEVGGGSLRIHDTKLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAP 523

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PH G+A G+DR V +L G  ++R+   FP + +  D+++ +PS + ++QL EL +++
Sbjct: 524 PHAGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLDAPSALDMKQLDELQIKV 580


>gi|46577271|sp|Q8FT19|SYD_COREF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 600

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 243/600 (40%), Positives = 334/600 (55%), Gaps = 31/600 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63
           RTH  G+L   + G  V L+GWV R R HGG+IF+D+RD  GI QVV  N D A  E A 
Sbjct: 3   RTHLSGELRKENAGQSVTLTGWVARRRDHGGVIFIDLRDRSGIAQVVFRNEDVA--ERAH 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREY 120
           ++RSE+VL + G+V  R   + N N+ +G +E+S     +L+ +  LP  +       E 
Sbjct: 61  ALRSEFVLQVTGVVEKRPEGSENPNLASGDVEVSVTDFTVLNESAPLPFQIEDASSAGEV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR      +  R+    + R  + + +F E  TP LT S+PEGARDF
Sbjct: 121 GEETRLKYRYLDLRRPVQANALRLRSAANKAARTVLDSHDFTEIETPTLTRSTPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  G+FYALPQ+PQ +KQLL  +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 181 LVPARLKPGTFYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +L  V++    G  +S    RI Y DA+R YG+DKPDLR  I + 
Sbjct: 240 MSFVDQEDVIALAEEILTEVWKLI--GYEISTPIPRITYADAMRLYGSDKPDLRFDIQIT 297

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
             T+ F  + FRVF           V A+  KGG    R   D   EWA+ +G  GLAYI
Sbjct: 298 ECTDFFADTTFRVFKNEY-------VGAVVMKGGASQPRRQLDAWQEWAKQRGAKGLAYI 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              + E G +   GPVAK++     E I   +  + GD  FF AGD     +    AR+ 
Sbjct: 351 L--VGEDGELG--GPVAKNITDAEREGIAAHVGAEPGDCIFFAAGDTRSSRALLGAARDE 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESL 469
           IA++L +I    + F W++D P +E   +            K    H+ FT P+      
Sbjct: 407 IARKLDLIRDGEWSFVWVVDAPMFESAADATASGDVALGNSKWTAVHHAFTSPKPEFLDT 466

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              +     A+ YD+VCNG EI  G IR H  +V  + F  +GIS+E   ++FG L  AF
Sbjct: 467 FDENPGEALAYAYDIVCNGNEIGGGSIRIHQRDVQERVFKVMGISEEEARDKFGFLLDAF 526

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
             G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ ++  Q +E G+
Sbjct: 527 AFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPITPLQRKESGI 586


>gi|317477028|ref|ZP_07936270.1| aspartyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316906821|gb|EFV28533.1| aspartyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 585

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 232/594 (39%), Positives = 345/594 (58%), Gaps = 17/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YR+H+CG+L +SD+   V LSGWV R R  GG+ F+D+RD YGITQ+V N   D+   E 
Sbjct: 2   YRSHTCGELRISDINKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVDAELCEQ 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ I G V  R ++  N NI TG IE+   ++ +L+ A   P  +    +  
Sbjct: 62  ANHLGREFVIQIVGTVNERFSK--NKNIPTGDIEIIVSELNVLNSALTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR T+ KN+  R ++   +R  + ++ FIE  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRATVRKNLELRHKMTIEVRKYLDSKGFIEVETPLLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E + + +F+E   G  ++  F R+ + +A++ YG+DKPDLR  +    
Sbjct: 239 SFVQQDDVIELFEGMAKYLFKEI-RGVELTEPFQRMPWANAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-IGGICAEGAASYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  G V     V K       + ++     + GD    ++G D +K      + R  
Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQEMKAAFGAKPGDLILILSGDDAMKTRKQLNELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   WI+DFP +EW+EEE ++   H+PFT P+     L   +  +++A
Sbjct: 410 MGNQLGLRDKNKFALLWIVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTNPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+VCNG E+  G IR H +++  + F  +G + E  E +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAEEQFGFLMNAFKFGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL L IVE
Sbjct: 530 AYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQKQLDELNL-IVE 582


>gi|325128778|gb|EGC51640.1| aspartyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 602

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/598 (39%), Positives = 353/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +     F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GGFPRMPYAEAMFYYGSDKPDMRIGLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   ++GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAENGDIIFFGA-DKAKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRL 592


>gi|123442639|ref|YP_001006616.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166225443|sp|A1JRL1|SYD_YERE8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|122089600|emb|CAL12449.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 598

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 236/593 (39%), Positives = 349/593 (58%), Gaps = 15/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V A+   GG    R   D   ++    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQVTRKQIDEYGQFVGIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
            D +  V G+  P+AK L+    EAI  R   + GD  FF A D  K  + A  A R  +
Sbjct: 356 -DRAAGVEGVQSPIAKFLSAEVLEAILARTQAESGDILFFGA-DSFKVVTDAMGALRLKV 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
            ++L +   + +   W++DFP +E ++ E  +   H+PFT P+    E L      +I A
Sbjct: 414 GRDLALTKLDSWAPLWVVDFPMFE-DDSEGGLSAMHHPFTAPKDMSPEQLAAAPTTAI-A 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H +E+  Q F  +GI++E    +FG L  A + G PPH G+
Sbjct: 472 NAYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEEEQREKFGFLLDALKFGTPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V
Sbjct: 532 AFGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584


>gi|294790954|ref|ZP_06756112.1| aspartate--tRNA ligase [Scardovia inopinata F0304]
 gi|294458851|gb|EFG27204.1| aspartate--tRNA ligase [Scardovia inopinata F0304]
          Length = 597

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/603 (38%), Positives = 342/603 (56%), Gaps = 35/603 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   D+    +G  V +SGWV R R HGG+ FLD+RD  G+ QVV   +    E+A+
Sbjct: 6   YRTHRAADITEDVIGQKVTISGWVDRRRDHGGVAFLDVRDASGLIQVVVYDE----EVAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-------FG 116
            +RSE+V+ + G V  R     N +I TG +E+ A+K+ +L+ +  LP  V         
Sbjct: 62  PLRSEFVVQVTGDVRERPEGNENDHIATGNVEIVAEKVTVLARSAALPFQVSTALSNEVQ 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           E+   E  R KYR+LDLRR  + +N+  R+ +  + R ++    F E  TP L  S+PEG
Sbjct: 122 EKLPGEDTRLKYRYLDLRRPQMQRNLKLRSNMSKAARNQLDELGFTEVETPTLIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R++ GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLSPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEMSFV Q+D++   E V++ V+E  S G  V+  F RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMSFVSQEDVIALAEKVVKAVWE--SAGYQVTIPFHRISWTDAMNKYGSDKPDLRFE 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPG 355
             + ++T++F ++ FRVF           V A+  +G     R   D   +WAR +G  G
Sbjct: 299 NQLVDLTDYFKNTPFRVFQADY-------VGAVVYQGAADLPRRQFDAWQDWARQRGAKG 351

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAY+  +  E G +   GPVAK+L+    + +   +  + GD+ FF AG           
Sbjct: 352 LAYV--QFSEDGILK--GPVAKNLSDSERDGLMEAVHAKPGDAVFFAAGHKESSQLLLGA 407

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQGGM 466
           AR  IA+  G++  + F F W++DFP ++  ++    D A         H+PFTMP    
Sbjct: 408 ARVEIAKRQGLLKKDDFAFVWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSADW 467

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
                 D     +  YD+VCNG EI  G +R H  ++  +  + +GI +E  +++FG L 
Sbjct: 468 IDTFDQDPEHAMSDSYDIVCNGNEIGGGSVRIHRDDIQDRVLNVLGIGQEEAQDKFGFLL 527

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            AF+ G PPH GIA G DR   +L G  ++R+V  FP S    D L G+P+ +S EQ  E
Sbjct: 528 EAFKYGAPPHAGIAFGWDRCAAILAGEDSIRDVIAFPKSGGGADPLTGAPAPISDEQRAE 587

Query: 587 LGL 589
            G+
Sbjct: 588 TGV 590


>gi|300781081|ref|ZP_07090935.1| aspartate--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300532788|gb|EFK53849.1| aspartate--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 624

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 238/598 (39%), Positives = 334/598 (55%), Gaps = 28/598 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  GDL     G  V L+GWV R R HGG+IF+D+RD  G  QVV   +S   E A  
Sbjct: 7   RTHLAGDLRKDMDGQTVTLTGWVGRRRDHGGVIFIDLRDRSGYAQVVFR-ESDVAEAAHD 65

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGEREYPE 122
           +RSE+ + + G+V  R   + N N+ +G+IE++A ++E+LS +  LP  V  F   E  E
Sbjct: 66  LRSEFCVKVTGVVEPRPEGSANPNLASGEIEVNATELEVLSKSAALPFQVEDFSSGEVGE 125

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R +YR+LDLRR+   + +  R++   + R  +    F+E  TP LT S+PEGARDFLV
Sbjct: 126 ETRLRYRYLDLRRERQAEALRLRSKANKAARDVLSKHEFVEIETPTLTRSTPEGARDFLV 185

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R+  GS+YALPQ+PQ +KQLLM +G +RYFQIA C+RDED R+DR P EF QLD+E S
Sbjct: 186 PARLRPGSWYALPQSPQLFKQLLMVAGMERYFQIARCYRDEDFRADRQP-EFTQLDIEAS 244

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+QDDI+   E ++  +++    G  +     R+ Y +A+ +YG+DKPDLR  I +   
Sbjct: 245 FVDQDDIIELAEEIVVELWKLI--GYEIPTPIPRMTYKEAMEKYGSDKPDLRFDIELVEC 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFW 361
           T+ F  + FRVF           V A+  +GG    R   D   EWA+ +G  GLAYI  
Sbjct: 303 TDFFKDTTFRVFQNEY-------VGAVVMEGGASQPRRQLDAWQEWAKQRGAKGLAYIL- 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G ++  GPVAK++     E I   +  + GD  FF AGD     +    AR  IA
Sbjct: 355 -IGEDGELS--GPVAKNITDAEREGIAAHVGAKPGDCIFFAAGDTKSSRALLGAARGEIA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKG 471
            +LG+I+ + + F W++D P +E   +            +    H+ FT P+        
Sbjct: 412 NKLGLIDDDAWAFTWVVDAPMFEPAADATASGDVALGNSQWTAVHHAFTSPKPEYLDSFD 471

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            +     A+ YD+VCNG EI  G IR H  +V  + F  +GI  E  + +FG L  AF  
Sbjct: 472 KEPGEALAYAYDIVCNGNEIGGGSIRIHNQDVQKRVFDVMGIGDEEAQEKFGFLLDAFSF 531

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P  +   Q +E G+
Sbjct: 532 GAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPGPIPAAQRKETGV 589


>gi|87123423|ref|ZP_01079274.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetases, class I
           [Synechococcus sp. RS9917]
 gi|86169143|gb|EAQ70399.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetases, class I
           [Synechococcus sp. RS9917]
          Length = 606

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 233/609 (38%), Positives = 346/609 (56%), Gaps = 40/609 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL    +   V+L GWV R R HGG+IF+D+RD  G  QV  +PD  +  F +A
Sbjct: 2   RSNGCGDLRKQQIDDQVQLCGWVDRRRDHGGVIFIDLRDRSGTVQVTVDPDLGAEAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119
           + +RSE VL + G V +R  E+ N  + TG +E+ A  I +L+ V   LP PV    E  
Sbjct: 62  EHLRSESVLQVAGTVRARPEESRNERLTTGDVEVLASSITVLNGVKGTLPFPVSIHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR  ++ N+  R   I + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAHTIQTARRFLEDEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLDM
Sbjct: 182 YILPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++QD+IL+  E ++  +++    G  +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQDEILDLNERLISSIWKAV-KGVELPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351
            NV++      F+VFS  +      +  A+P    GGN A          D  +E A+  
Sbjct: 300 TNVSDIVASMGFKVFSGAVKAGGSVKCIAVP----GGNDAVSNVRIKPGGDVFSE-AQQA 354

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLA+I  R+ E G++  +G +  +L+    + +  R   + G    F AGD      
Sbjct: 355 GAGGLAFI--RVREGGDIDTIGAIKDNLSEEQKQELLSRTGAEAGTLLLFGAGDTATVNK 412

Query: 412 FAADARNHIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-- 465
                R  +A+ELG++    N + + F W++DFP +E+N +E +++  H+PF  P G   
Sbjct: 413 ALDRVRQVLARELGLVPADRNNDQWNFLWVVDFPMFEFNADENRLEALHHPFCAPNGNDL 472

Query: 466 -------MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
                   E+L G      +A  YDLV NG E+  G +R H S +  Q    +G+ +   
Sbjct: 473 GSDPAAWAETLPG-----ARAQAYDLVLNGLELGGGSLRIHDSALQRQVLKTIGLPEAEA 527

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
           + +FG L  A   G PPHGG+A G+DR+VMLL G +++R+   FP +Q    L+  +P+ 
Sbjct: 528 KEQFGFLIEALDMGAPPHGGLAFGLDRMVMLLAGEESIRDTIAFPKTQQARCLMTAAPAG 587

Query: 579 VSVEQLREL 587
           VS  QL EL
Sbjct: 588 VSDRQLEEL 596


>gi|322832431|ref|YP_004212458.1| aspartyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321167632|gb|ADW73331.1| aspartyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 598

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 233/591 (39%), Positives = 342/591 (57%), Gaps = 11/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L  S+VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD A  +++A 
Sbjct: 2   RTVYCGKLNASNVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQAEAYKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R     N ++ TG++E+ A  + I++ +E LPL         E 
Sbjct: 62  ELRNEFCIQLTGTVRARPESQFNKDMATGEVEVFASNLNIINRSESLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M + +F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMANRLKARAKITSFVRRFMDSHDFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME + R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ M +V 
Sbjct: 239 MSAEQVREVMEKLARELWQEVKGVDL--GDFPIMTFAEAMRRYGSDKPDLRNPMEMVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + EF+VF+   + +P   V A+   GG   +R   D   ++    G  GLAYI   
Sbjct: 297 DLMKNIEFKVFADPAN-DPKGRVAALRVPGGASLSRKQIDEYAKFIEIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN     A+  R   QDGD  FF A             R  + +
Sbjct: 356 EVAKGLEGIQSPVAKFLNEELLAALIARTGAQDGDMIFFGAAGAKIVTDAIGALRLKVGR 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +L I   + +   W++DFP +E + +E  +   H+PFT P+    E L  N + +I A  
Sbjct: 416 DLKITKEDMWAPLWVIDFPMFE-DTDEGGLSAMHHPFTAPKDMSAEELAANPVSAI-ANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H SE+    FS +GI++     +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHRSEMQQTVFSILGINEHEQREKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L ELG+ +V
Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLLELGIAVV 584


>gi|229493472|ref|ZP_04387257.1| aspartyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229319433|gb|EEN85269.1| aspartyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 602

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 241/596 (40%), Positives = 329/596 (55%), Gaps = 28/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L        V L+GWV R R HGG+IF+D+RD  G+ QVV        E A  
Sbjct: 3   RTHLAGSLRPEQAEQTVTLTGWVARRRDHGGVIFIDLRDASGVAQVVFRAGDVA-EQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  I TG IE++A ++E+L+  E  PLP   + +  E  
Sbjct: 62  LRAEYCVRVTGTVEVRPEGNQNFEIPTGAIEVNATELEVLN--ESAPLPFQLDDQVGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+     I  R+++  + R  +    F+E  TP LT S+PEGARDFLVPS
Sbjct: 120 RLKYRYLDLRREGPGSAIRLRSKVSAAARGVLAHHEFVEVETPTLTRSTPEGARDFLVPS 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EM+FV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQP-EFTQLDIEMAFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            QDDI+   E +L  +++    G+ +     R+ Y +A+RRYG+DKPDLR  I +    +
Sbjct: 239 NQDDIILLAEEILTALWKLV--GHEIKTPIDRMTYTEAMRRYGSDKPDLRFDIELVECMD 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 297 FFKDTTFRVFQAEY-------VGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPVAK+L     E +   +  Q GD  FF AG      +    AR  IA++
Sbjct: 348 GEDGTLG--GPVAKNLTDAEREGLAAHVGAQPGDCVFFAAGATKPMRALLGAARGEIARK 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473
             +I+ + + F WI+D P +E   +     D A         H+ FT P+         D
Sbjct: 406 KDLIDPDAWAFVWIVDAPMFEPTADATASGDVALGHSAWTAVHHAFTSPKPEFFDTFDTD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  A+ YD+VCNG EI  G IR H  ++  + F  +GIS+E  + +FG L  AF  G 
Sbjct: 466 PDSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFKVMGISEEEAQEQFGFLLDAFAFGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGGIA G DRI  LL G  ++REV  FP S    D L  +P+ +S +Q +E G+
Sbjct: 526 PPHGGIAFGWDRITALLAGMDSIREVIAFPKSGGGVDPLTDAPAPISAQQRKESGI 581


>gi|325001175|ref|ZP_08122287.1| aspartyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 614

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 236/596 (39%), Positives = 327/596 (54%), Gaps = 27/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L   + G  V L+GWV R R HGG+IF+D+RD  G  QVV   +    E A  
Sbjct: 3   RTHPVGTLRAENAGQTVTLAGWVARRRDHGGVIFIDLRDRSGSAQVVFR-EGEMAERAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + + G V+ R     N+ + TG IE++   + +LS A  LP P+       E I
Sbjct: 62  LRSEFCVQVVGEVVRRPEGNENSELPTGDIEVTVTGLTVLSEAAPLPFPIDEHTGVGEEI 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  +R+LDLRR      +  R+ +  + R  + AE+FIE  TP LT S+PEGARDF+VP+
Sbjct: 122 RLTHRYLDLRRSGPASAMKLRSDVNKAARDVLAAEDFIEVETPTLTRSTPEGARDFVVPA 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 182 RLRPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E VL  +++    G  +     R+ Y +A+ RYG+DKPDLR    +  +T 
Sbjct: 241 EQDDVIALAEKVLVALWKLV--GYDIPAPIPRMSYAEAMSRYGSDKPDLRFGFELTELTS 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF      NP      +P  G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 299 YFADTGFRVFQ-----NPYVGAVVMPG-GASQPRKVLDGWQEWAKQRGARGLAYVL--IG 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G V   GPV K+L+      +   +    GD  FF AG P    +    AR  IA+ +
Sbjct: 351 EDGQVDERGPVVKNLSETERAGLAAAVGANPGDCIFFAAGTPSDARALLGAARGEIARRV 410

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQ----GGMESLKGND 473
           G I+ + + F WI+D P +E   +   +          H+ FT P        E   G  
Sbjct: 411 GAIDESAWSFVWIVDAPLFESTADTDDVAVGGGAWTALHHAFTSPTPDWIDTFEQSPGEA 470

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           L    A+ YD+VCNG EI  G IR H ++V  + F  +G+S+   + +FG L  AF  G 
Sbjct: 471 L----AYAYDIVCNGNEIGGGSIRIHDADVQKRVFEIMGLSEAEAKEKFGFLLDAFSYGP 526

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGGIA G DRI  LL G  ++REV  FP +    D L  +P+ ++  Q +E G+
Sbjct: 527 PPHGGIAFGWDRITALLAGVDSIREVIAFPKTGGGFDPLTQAPAPITAAQRKEAGV 582


>gi|332978458|gb|EGK15171.1| aspartate--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 601

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 232/604 (38%), Positives = 362/604 (59%), Gaps = 22/604 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +  + +   + + GW+HR R HGG+IFLD+RD  GI QVV +PD+   F  A 
Sbjct: 3   RTEYCGAVTEALLEQTITVKGWIHRRRDHGGVIFLDMRDREGILQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122
           + R E+VL I G V  R   T N+N+ +GQ+EL A++I +L+ +E  P P+  E     E
Sbjct: 63  AARPEYVLEITGRVRKRYEGTENSNMTSGQVELLAKEITVLAKSETPPFPLNDENTTVNE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LD+RR  + + +V R +  +++R  +  + F++  TPILT ++PEGARD+LV
Sbjct: 123 DLRLKYRYLDMRRPQMQERMVFRAKATSTIRRYLDEQGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G+F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRTRPGNFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I++  E +++ +F+   + +     F R+ Y DA+R Y +DKPDLR P+ + +V
Sbjct: 242 FLTEEEIMSINEGLIQNLFKTMLDVDL--GEFPRMTYADAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   + +P   V A+    GG   R   D   ++    G  GLAYI  
Sbjct: 300 ADLMQGVEFKVFAGPAN-DPKGRVAALRIPNGGSLTRKQIDGYTKFVGIYGARGLAYI-- 356

Query: 362 RLDESGNV-------AGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
           ++++  N+       +G+  P+ K+++     ++  R + QDGD  FF   D  K  + A
Sbjct: 357 KVNDVTNINNGVDKESGLQSPIIKNMSDDVLVSLVERTEAQDGDIIFF-GADKAKIVNDA 415

Query: 414 ADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
             A R  I  ++ +  C  +   W++DFP +E  ++ K     H+PFTMP+G +E LK +
Sbjct: 416 MGALRVKIGLDMNMETCE-WAPLWVVDFPMFEETDDGKWTSM-HHPFTMPKGSVEELKNS 473

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
              ++ +  YD+V NG EI  G +R +  ++    F  +GIS+E    +F  L  A + G
Sbjct: 474 PETAL-SIAYDMVLNGTEIGGGSLRINTVKMQRAVFDALGISEEEANEKFSFLLDALKFG 532

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V   QLRELG+R+ 
Sbjct: 533 APPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTQAPAEVDGRQLRELGIRVR 592

Query: 593 ENPK 596
           E  +
Sbjct: 593 EKAQ 596


>gi|297566455|ref|YP_003685427.1| aspartyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296850904|gb|ADH63919.1| aspartyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 580

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 244/591 (41%), Positives = 339/591 (57%), Gaps = 25/591 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH CG +    VG  V L GWV+R R  GG+IF+D+RD  G+ QVV +P S  F  A  
Sbjct: 3   RTHYCGKVNEQLVGQTVTLEGWVNRRRDLGGLIFIDLRDREGLVQVVVDPGSPAFTEADR 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----FGERE- 119
           VR+EWV+ + G V  R  E IN  + +G++E+ A+ +E+LS A  LP  V     GE + 
Sbjct: 63  VRNEWVVRVQGKVRERPVEQINPKLQSGKVEVVAEGLEVLSEARTLPFQVDAGWRGEEDQ 122

Query: 120 -YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R + R +DLRR  LH+N+  R R+I ++   +    F    TP LT S+PEGAR
Sbjct: 123 GVSEEVRLRNRVVDLRRRRLHQNLRLRHRVIAAIYRFLDQAGFTSVETPYLTRSTPEGAR 182

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR+  G FYALPQ+PQ +KQ+LM +G+DRYFQIA CFRDED R+DR P +F QLD
Sbjct: 183 DFLVPSRLAPGHFYALPQSPQLFKQMLMVAGYDRYFQIARCFRDEDLRADRQP-DFTQLD 241

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSFVEQ+DIL   E +   V +E + G  +   F R+ Y  A+  YG+DKPDLR  + 
Sbjct: 242 MEMSFVEQEDILAINEQLAAYVVKE-ALGIELPLPFPRLTYQQAMDTYGSDKPDLRFGLE 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +  VT  F   EFR F+ + +V        +P      +R   + +   A+S+G  GLA 
Sbjct: 301 LQEVTALFAGGEFRAFAGVETVK----CLVVPTLL---SRREIEELAALAKSKGAAGLA- 352

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
             W   E G ++G   +AK +     E +R      DG +  F+AG   K        R 
Sbjct: 353 --WAKFEGGELSGG--IAKFIPAALLEQVRP----SDGQTLLFVAGPWRKAVESLGAVRL 404

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + + LG+I    + F W++DFP  EW+EE  +  + H+PFT P      L  +D   ++
Sbjct: 405 ELGRRLGLIGPG-YRFLWVVDFPLLEWDEESGRWTYMHHPFTSPNLDDLPLLESDPGKVR 463

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+ YDLV NG E+  G IR H  ++  + F+ +GIS    + +FG L  A   G PPHGG
Sbjct: 464 AYAYDLVFNGLEVGGGSIRIHRRDLQERMFALLGISLAEAQEKFGFLLEALSYGAPPHGG 523

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           IA G+DR +  L G +++REV  FP ++   + L G+PS VS  QL ELG+
Sbjct: 524 IAWGLDRFIATLAGEESIREVIAFPKNKEGRETLTGAPSPVSPAQLAELGI 574


>gi|312879712|ref|ZP_07739512.1| aspartyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783003|gb|EFQ23401.1| aspartyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 600

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/587 (40%), Positives = 329/587 (56%), Gaps = 15/587 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CGDL + D G  V L+GW+ R R  GGIIFL++ DH G TQVV NP+ A    E A
Sbjct: 12  RTDRCGDLRLGDQGRSVVLNGWLRRRRDLGGIIFLELWDHTGTTQVVLNPERAPEVHERA 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +RSE+VL + G V  R   T N  + TG++E+  +   +LS ++ LP  +    +  E
Sbjct: 72  KDLRSEYVLAVKGRVSVRPEGTENPGMPTGEVEVLVEDFLLLSPSKPLPFEIGEAEKVDE 131

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YRFLDLRR+ + +N+  R  +    R  +    F+E  TP+LT S+PEGARDFLV
Sbjct: 132 NLRLRYRFLDLRRERMQQNLRVRHAVGAYTRNYLGERGFMEVETPMLTKSTPEGARDFLV 191

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G F+ALPQ+PQ +KQ+LM SG DRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 192 PSRVNPGRFFALPQSPQIFKQILMVSGCDRYFQIVKCFRDEDLRADRQP-EFSQVDLEMS 250

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV ++D+   +E  + G+F E  +   +   F R+ + +A+ RYG+DKPDLR P  + ++
Sbjct: 251 FVTEEDLYELLEGYMAGLFREVLD-LEIPTPFPRMTWKEAMDRYGSDKPDLRIPTALVDL 309

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +        + S   +V  G  V  +P  GG   +R     +   A   G  GLA I  
Sbjct: 310 GDLLGAPGGPLES---TVAAGGAVRGLPLPGGASLSRKEVADLEARAVELGAGGLACI-- 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADARNHI 420
              +  N    GP  K L+      +  R D+ DGD+   +A    K  C      R  +
Sbjct: 365 ---QRKNGELKGPFVKALDEATRGRLAERGDLADGDALLVVADKEWKRVCEVLGQLRLEL 421

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+   ++    + F W++DFP  EW+EE+ +    H+PFT P+     L   D  ++++ 
Sbjct: 422 ARARNLVE-EGWRFLWVVDFPLLEWDEEQGRYTAVHHPFTAPKDEDLPLLDTDPGAVRSR 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H  ++  + F  +  + E    RFG L  A   G PPHGG+A
Sbjct: 481 AYDLVLNGNEVGGGSIRIHNPQMQERVFQALAFTPEAARERFGFLLEALSYGTPPHGGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
            G DR+ MLL GAK++REV  FP +Q    LL G+P  V   QL EL
Sbjct: 541 LGFDRLAMLLCGAKSIREVMAFPKTQRAQCLLSGAPGVVDEAQLAEL 587


>gi|303256235|ref|ZP_07342251.1| aspartate--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302860964|gb|EFL84039.1| aspartate--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 597

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 238/599 (39%), Positives = 346/599 (57%), Gaps = 10/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT   G +    +G  V L GW HR R HGG+IF+D+RD  G+ Q+V +PD    FE A 
Sbjct: 2   RTEYAGLIDEKFLGQTVTLYGWAHRRRDHGGVIFIDLRDREGLVQIVCDPDRPDVFETAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+V+ + GLV +R   T N N+I+G +E+ AQ+++IL+ +   P  +  +    E+
Sbjct: 62  KVRNEFVVEVKGLVRARPEGTRNENLISGGVEVLAQELKILNPSAPPPF-LLDDENLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  YR LDLRR  + +N+  R +   + R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTYRVLDLRRLPMQRNMKLRYKAAMAFRRFLDKHGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR++ G FYALPQ+PQ +KQ+LM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRIHDGHFYALPQSPQLFKQMLMCAGFDRYYQIVKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I   ME ++R VF+E  N + + N F  + + DA+  YG+DKPDLR  + + ++T
Sbjct: 240 LNEVEIRALMEELIRAVFKEAINVD-LPNPFPIMLWTDAMNNYGSDKPDLRVKLKLTDLT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + +F+VF     +N G  +      G    R+  D   E+ +  G  GLAYI    
Sbjct: 299 DLMSNVDFKVFRSATELNDGRVMALRVPHGASMPRSEIDGYTEFVKIYGAKGLAYIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQ 422
            ++G      P+ K+L+    +AI  R   QDGD  FF A    + F S  A        
Sbjct: 359 IKAGREGLQSPIVKNLSDDVLKAIIERTGAQDGDVIFFGADRKKIVFDSLGALRLKVGHS 418

Query: 423 ELGIINCNCFEF----CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           E G  +   FE      W++DFP +E++EEE++    H+PFT P+ G E     D  +  
Sbjct: 419 EFGK-SHGLFEEGWRPLWVIDFPMFEYDEEEERWVACHHPFTSPKDGDEDKLVTDPENCF 477

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G IR H ++V  + F+ + I  E    +FG L    Q G PPHGG
Sbjct: 478 AKAYDMVLNGWEIGGGSIRIHKADVQSKVFNALKIGPEEARAKFGFLLDVLQYGAPPHGG 537

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V  +QLREL +R+    KK
Sbjct: 538 LAFGLDRIVTMMCGADSIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRLRNEHKK 596


>gi|305665586|ref|YP_003861873.1| aspartyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88710342|gb|EAR02574.1| aspartyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 582

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/594 (38%), Positives = 345/594 (58%), Gaps = 21/594 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR+HSCG+L  S++   V LSGWVH+ R  G + ++D+RD YGITQ+V +      E+ +
Sbjct: 2   YRSHSCGELRESNINEVVTLSGWVHKTRDKGFVAWVDLRDRYGITQLVFDEKRTSTELLE 61

Query: 64  SVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             R+   E+V+ + G V+ R+++  N NI TG IE+  Q++ IL+ ++  P  +  + + 
Sbjct: 62  KARNLGREFVVQVKGKVIERASK--NNNIATGDIEVLVQELNILNTSKTPPFTIEDQTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR+ + +N++ R+++   +R  +  E FIE  TP L  S+PEGARDF
Sbjct: 120 GEDLRMKYRYLDIRRNPVKENLIFRSQVTMEVRNYLSKEGFIEVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DIL   E + R + +E     T    F R+ YD+A+ +YG DKPD+R  +   
Sbjct: 239 MAFVEQEDILKAFEGLTRHLLKEIKGVETTE--FPRMTYDEAMAKYGNDKPDIRFGMEFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357
            +     H +F VF      N    V  I   GG    R   D++ +W R    G  G+ 
Sbjct: 297 ELNSVAQHKDFNVF------NSAELVVGIAVPGGASYTRKEIDKLVDWVRRPQVGAKGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  + +E G+      V K  +  +        +   GD    ++G+  +  +  +  R
Sbjct: 351 YV--KCNEDGSFK--SSVDKFYDQDDLGNWAKATEANPGDLICVLSGNINETRAQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ LG+ N   F   W++DFP  E +EE  +    H+PFT P+ G   L  ++  ++
Sbjct: 407 MELAERLGLRNNAEFAPLWVIDFPLLELDEETGRYHAMHHPFTSPKPGQLELLDSEPSNV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA  YDLV NG EI  G IR H  ++    F ++G + E  + +FG L  AFQ G PPHG
Sbjct: 467 KANAYDLVLNGNEIGGGSIRIHDKDIQSTMFKHLGFTPEEAKAQFGFLMDAFQYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DR+V +L G + +R+   FP + +  D+++ +P+ +  EQL+EL L++
Sbjct: 527 GIAFGLDRLVSILGGQETIRDFIAFPKNNSGRDVMIDAPAPIDREQLKELNLKL 580


>gi|325286549|ref|YP_004262339.1| aspartyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324322003|gb|ADY29468.1| aspartyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 584

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 228/595 (38%), Positives = 345/595 (57%), Gaps = 17/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61
           YR+H+CG+L  + + + V LSGWV + R  G I+++D+RD YG+TQ+V + +    E+  
Sbjct: 2   YRSHNCGELNATHINTEVTLSGWVQKSRDKGFIVWVDLRDRYGVTQLVFDEERTSKEMME 61

Query: 62  -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +  E+V+ + G V+ R+++  N N+ TG+IE+   ++ IL+ A   P  +  E + 
Sbjct: 62  RAQKLGREFVIQVKGKVIERASK--NPNMPTGEIEILVSELTILNKAIVPPFTIEDETDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR+ +  N++ R+++   +R  +    FIE  TP L  S+PEGARDF
Sbjct: 120 GEDLRMKYRYLDIRRNPVKNNLIFRSKVSMEVRNFLSNNGFIEVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGEFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DILN  EN+ R + +E  NG  V + F R+ +DDA+R YG DKPD+R  +   
Sbjct: 239 MAFVEQEDILNIFENLTRHLLKEI-NGVEV-DKFPRMLFDDAMRLYGNDKPDIRFGMEFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
            + +   H +F VF      N    V  I   GG    R   D++ +W +      L  +
Sbjct: 297 ELNDIAQHKDFGVF------NNAELVVGIAVPGGNAYTRKEIDKLIDWVKRPQVGALGMV 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R ++ G+      V K  +  +      R   + GD    ++G   K  +  +  R  
Sbjct: 351 YSRCNDDGSFK--SSVDKFYDQEDLAKWAERTGAKPGDLVCVLSGPANKVRAQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ LG+   N F   W++DFP  E +EE       H+PFT P+ G   L   D  ++KA
Sbjct: 409 LAERLGLRKPNEFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDTDPGAVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H  E     F ++G + E  + +FG L  AFQ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKETQATMFKHLGFTPEEAKEQFGFLMDAFQYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR+V +L G + +R+   FP + +  D+++ +P+ +  EQL+EL L++  N
Sbjct: 529 AFGLDRLVSILGGQETIRDFIAFPKNNSGRDVMIDAPAAIDDEQLKELSLQVTVN 583


>gi|225026139|ref|ZP_03715331.1| hypothetical protein EUBHAL_00380 [Eubacterium hallii DSM 3353]
 gi|224956544|gb|EEG37753.1| hypothetical protein EUBHAL_00380 [Eubacterium hallii DSM 3353]
          Length = 597

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 237/597 (39%), Positives = 352/597 (58%), Gaps = 14/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEI 61
           R+H C ++   ++G  V L GWV + R  G +IF+D+RD  G+ Q+  + ++     F+ 
Sbjct: 10  RSHRCTEVSNENIGETVTLMGWVQKRRNLGSLIFVDLRDRSGLIQLYFDEETIGEEGFKK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+R+E+V+ + G V  RS   +N N+ TG IE+    I ILS +E  P P+  +    
Sbjct: 70  AASLRAEFVIAVTGTVEKRSG-AVNENLETGDIEVKVDSIRILSESETPPFPIDADITVK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYRFLDLRR  + KN++ R+++    R  +  E F+E  TP+LT S+PEGARD+L
Sbjct: 129 DELRLKYRFLDLRRPNIQKNLMMRSKVATLTRQFLANEGFLEIETPMLTRSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQ+A CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQLARCFRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L  +F+   N   VS    R+ + DA+  YG+DKPDLR  + + +
Sbjct: 248 SFVDVDDVIDVNERLLAYLFKLCLN-EEVSLPIQRMTWQDAMDYYGSDKPDLRFDMKIQD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360
           V+E      F VF+   ++  G  V  + AKG G  +      + + A+  G  GLAYI 
Sbjct: 307 VSELVKDCGFGVFTG--AIENGGMVRGLCAKGLGDVSSKKMKHIEKTAKDYGAKGLAYI- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +L   G V    P +K ++    +A+   +  + GD   F A      C      R   
Sbjct: 364 -QLKSDGTVK--CPFSKFMSEEELQALIQAMGGETGDLLVFAADKFKVVCDVLGALRLKF 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +++ + + F WI +FP  EW+EEE +    H+PFTMP      +   +   ++A 
Sbjct: 421 AEELNLLDKSEYRFVWITEFPLLEWSEEENRYTAMHHPFTMPMEEDLDMIDTEPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H +++  + F  +GISKE  + +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTEIGGGSVRIHQNDIQEKMFECLGISKEQAQEKFGFLLEAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML+     +R+V  FP  ++   LL  +P+TV  +QL EL L I E P+K
Sbjct: 541 YGLDRLVMLMTKEDTIRDVIAFPKVKDASCLLTDAPNTVDDKQLEELCLEI-EIPEK 596


>gi|212696219|ref|ZP_03304347.1| hypothetical protein ANHYDRO_00755 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676848|gb|EEB36455.1| hypothetical protein ANHYDRO_00755 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 585

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/599 (37%), Positives = 350/599 (58%), Gaps = 20/599 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           M   R+H CG+L   ++G  V L GWV + R  G ++F+D+RD  GITQ+V    DS  +
Sbjct: 1   MEFKRSHMCGELREENIGEEVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVTREEDSENY 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  K V  E+VL + G V  R  E+ N  I TG IE+ A+KI IL  A+  P+ +  + +
Sbjct: 61  KTVKDVAGEYVLEVKGEV--RERESKNPEIPTGNIEIVAEKINILDKAKTPPIYIKDDDD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+++ KYR+LD+R+ ++ KN+  R+ I+  MR  M    F E  TP LT  +PEGARD
Sbjct: 119 VSENLKLKYRYLDMRKQSVQKNLKLRSDIVRCMREYMYDNKFTEVETPFLTKPTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVNQG FYALPQ+PQ  KQLLM    DRYFQI  CFRDED R++R P EF QLD+
Sbjct: 179 YLVPSRVNQGRFYALPQSPQLMKQLLMIGSLDRYFQIVKCFRDEDLRANRQP-EFTQLDI 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E+SF +QDD++   E +L+ +F+ F++ + +     R+ Y +A+  YG+DKPDLR    +
Sbjct: 238 ELSFADQDDVIKVNEGLLKKLFDTFTDYD-LQLPIPRMDYSEAMNSYGSDKPDLRYGYKI 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLA 357
           ++++E F  S+F+VF+   ++  G+ V AI   G   N  R   D++ ++ +  G  GL+
Sbjct: 297 NDISEIFKGSDFKVFTD--NIKEGHSVRAINFTGQASNYSRKQLDKLTDFVKDYGLKGLS 354

Query: 358 YIFWRLDESGNVAGMGPVAKHL--NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +I +  D   N +    + K L  +I+N   ++ +LD++D D    IA D  K       
Sbjct: 355 FIKFNSDNDINSS----IKKFLTDDIINN--LKEKLDIKDND-LILIAADKNKTVLEGLG 407

Query: 416 A-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           A R  +A++  +     + FCW+++FP +E++EEE +    H+PFTMP      L   + 
Sbjct: 408 ALRRKVAKDQNLYEKE-YAFCWVVNFPMFEYSEEEDRYVSQHHPFTMPNEEDVDLLLTEP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++   YD+V NG E+  G +R +  E+  + F  + +S E ++ +FG    A Q G P
Sbjct: 467 EKVRTQAYDIVINGDEMGGGSVRINNQELQEKVFKALKLSDEDIKQKFGFFIEALQYGTP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PH G+A G+DR+VML     N++++  FP +Q+    L  +PS V  + L EL + + E
Sbjct: 527 PHAGLAYGLDRMVMLFAKTDNIKDIIAFPKTQSATCPLTQAPSIVDEKSLSELSIEVKE 585


>gi|319639099|ref|ZP_07993856.1| aspartyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317399677|gb|EFV80341.1| aspartyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 602

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/598 (39%), Positives = 352/598 (58%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR T+ +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPTMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y + +  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVDL--GDFPRMPYSETMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++  N++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVSNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKAKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFVDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNVVDDKQLRELSLRL 592


>gi|91217020|ref|ZP_01253983.1| aspartyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91184891|gb|EAS71271.1| aspartyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 582

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/593 (38%), Positives = 345/593 (58%), Gaps = 21/593 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60
           YR H+  +L +  +   V LSGWV ++R  G II++D+RD YG+TQ+V + D       E
Sbjct: 2   YRDHNNSELNIESLNKKVTLSGWVQKIRDKGFIIWVDLRDRYGLTQLVFDSDRTPKDIME 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AKS+  E+V+  +G V+ R ++  N +I TG IE+  +K+ IL+++E  P  +  E + 
Sbjct: 62  KAKSLGREFVIQAEGTVIERISK--NKSITTGDIEVLVEKLTILNISETPPFTIEDETDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YR+LD+RR+ +   ++ R+++  ++R  +  + FIE  TP L  S+PEGARDF
Sbjct: 120 GEDLRMRYRYLDIRRNPVKNKLIFRSKVSMAVRNYLTQKEFIEVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNAGQFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DILNT E + + + +E  NG  V  +F RI YD+A++ YG DKPD+R  +   
Sbjct: 239 MTFVEQEDILNTFEGLTKYLLKEI-NGVEV-KDFPRITYDEAMQTYGNDKPDIRFGMKFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357
            +     H +F+VF      N    V  I   G    +R   D++ EW +    G  G+ 
Sbjct: 297 ELNAIAQHKDFKVF------NEAELVVGIAIPGAASYSRKDIDKLIEWMKRPQVGAKGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  + +E G++     V K  +  + +A   +   Q GD    ++G         +  R
Sbjct: 351 YV--KCNEDGSLK--SSVDKFYDESDLKAWVEKTGAQPGDLICILSGKANATRGQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +   LG+     F   W++DFP  EW+E  ++    H+PFT P+ G   L   D  ++
Sbjct: 407 MEMGNRLGLRKPKEFAPLWVVDFPLLEWDEATQRFHAMHHPFTSPKEGQLELLATDPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA  YDLV NG EI  G IR H  +     F  +G +KE  E +FG L +AF  G PPHG
Sbjct: 467 KANAYDLVLNGNEIGGGSIRIHDQKTQSMMFDYLGFTKEEAEAQFGFLMKAFTYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           GIA G+DR+V +L G +++R+   FP + +  D+++ +P+ +S +QL+EL ++
Sbjct: 527 GIAFGLDRLVAILGGQESIRDYIAFPKNNSGRDIMIDAPAELSADQLKELHIK 579


>gi|294670692|ref|ZP_06735567.1| hypothetical protein NEIELOOT_02414 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307580|gb|EFE48823.1| hypothetical protein NEIELOOT_02414 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 602

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/598 (39%), Positives = 353/598 (59%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NINEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFQDALGVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++  N++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVSNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKAKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++E+  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGAENGYFVDEWKPLWVVDFPMFEYDEDADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLRELGLR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNVVDDKQLRELGLRL 592


>gi|237749472|ref|ZP_04579952.1| aspartyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380834|gb|EEO30925.1| aspartyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 605

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 236/597 (39%), Positives = 348/597 (58%), Gaps = 14/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG      +G  V L GWVHR R HGGIIF+D+RD  G+ QVV +PD    F++A+
Sbjct: 4   RTNYCGLTTEKMLGQTVTLCGWVHRRRDHGGIIFIDLRDREGLVQVVCDPDRPDVFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+ L + G+V  R   T+N N+ +G+IE+  +K+E+L+ +   P  +  E    E+
Sbjct: 64  SVRNEFCLQVTGIVRERPQGTVNENLTSGRIEVFCEKLEVLNPSVTPPFQLDDE-HLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++    R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQNNLRLRYKVAMETRKYLDENGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D EMSF
Sbjct: 183 SRVNPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCEMSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ +I +  EN++RG+F++  + + + N F  + ++ A+ +YG+DKPDLR  +    +T
Sbjct: 242 VEEQEIRDLFENMIRGIFKKTMDVD-LPNPFPVMTHELAMAKYGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAI----PAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           +      F+VFS   ++  G  V  +     A+G G  R+  D   ++    G  GLAYI
Sbjct: 301 DVMKDVPFKVFSNAANMQGGRVVALLVPGGSAEGSGMPRSEIDSYTQFVGIYGAKGLAYI 360

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
                E G      P+ K+L   + + I  R   ++GD  FF A D  +  + A  A RN
Sbjct: 361 RVNDIEKGAAGLQSPIVKNLTEESIKQILERTGAKNGDLIFFGA-DKARVVNDAMGALRN 419

Query: 419 HIA-QELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
            I   + G  N      +   W++DFP +E++E + +    H+PFT P+ G E    +D 
Sbjct: 420 KIGYSDFGHANGLFDEAWAPLWVIDFPMFEYSESDNRWAACHHPFTSPKDGHEDYLESDP 479

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               +  YD+V NG+E+  G IR H  EV  + F  + IS    + +FG L  A Q G P
Sbjct: 480 GRCLSKAYDMVLNGWELGGGSIRIHKEEVQSKVFRALKISDTEAQEKFGFLLDALQYGAP 539

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PHGG+A G+DR+V L+  + ++R+V  FP +Q    LL  +PS V  +QL+EL +R+
Sbjct: 540 PHGGLAFGLDRLVTLMTRSDSIRDVIAFPKTQRAQCLLTQAPSEVGEKQLQELHIRL 596


>gi|325107096|ref|YP_004268164.1| aspartyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324967364|gb|ADY58142.1| aspartyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 588

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/589 (39%), Positives = 337/589 (57%), Gaps = 9/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG+L  S  G  V+LSGWV + R H GI+F+D+RD YG TQ+  N +  S   + A
Sbjct: 3   RTHTCGELRKSHAGQQVKLSGWVDKYRDHAGIVFIDLRDRYGKTQIKFNLEDGSDIQKSA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +S+R E V+ + G V++R  + +N  + +G+IE+    + I S ++  P          E
Sbjct: 63  RSLRHEDVVTVTGEVVARPEDMVNPKLESGEIEVRVADLIIQSKSDTPPFLPSSSDLPNE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R K R +DLRR  L   +V R +    +R    A+ F++  TPIL  S+PEGARD+LV
Sbjct: 123 ELRLKNRVVDLRRPELQNAMVLRHKFTKLVRDYFDAQGFLDIETPILGRSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++G FYALPQ+PQ +KQLLM SG+DRY QIA CFRDED R+DR P EF Q+D+EM+
Sbjct: 183 PSRIHEGCFYALPQSPQIFKQLLMCSGYDRYMQIARCFRDEDLRADRQP-EFTQIDLEMA 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDD+L  ++ ++  +  + + G        R  Y D + R+GTDKPD+R  + + ++
Sbjct: 242 FVEQDDVLGVIDGMVDKILTDLA-GIQHQMPLPRYSYADVMERFGTDKPDMRFGMELVDL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            E     +F VF   +           P       R   D + E+ +  G  GLA  F+R
Sbjct: 301 AEIAGRCDFGVFKNTIEAGNRVRGLVAPQAADKYTRKKIDELTEFVKDYGAKGLA--FFR 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E    A   P+AK  +  + +AI  +L  ++GD  F +A       +  A  RN + +
Sbjct: 359 VKEG---ALDSPIAKFFSEDDQKAIIEKLGAENGDLIFCVADTNAVSSAALAALRNRLGE 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL + +   F   W++DFP   ++E+EK+    H+PF  P         +D  +++A  Y
Sbjct: 416 ELELYDPKAFSCLWVVDFPLMHFDEDEKRWYAEHHPFCYPHPDDLEKLDSDPAAVRAQSY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E ASG IR H S +  + F  + I+ E  E RFG L +  + G PPHGG A G
Sbjct: 476 DLVVNGYEAASGSIRIHDSAIQQKVFDLLEINPEEAERRFGFLLQGLRFGAPPHGGAALG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR VMLL G  N+R+V  FP +Q   DLL G+PS V  +QLREL +++
Sbjct: 536 LDRWVMLLCGYDNIRDVIAFPKTQKASDLLSGAPSDVDPKQLRELYIKL 584


>gi|120403600|ref|YP_953429.1| aspartyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119956418|gb|ABM13423.1| aspartyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 601

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/607 (38%), Positives = 340/607 (56%), Gaps = 30/607 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT + G L  +D G  V L+GWV R R HGG+IF+D+RD  G +QVV   +      A  
Sbjct: 13  RTRTAGSLRPADAGQTVTLAGWVARRRDHGGVIFIDLRDASGTSQVVFR-EGEVLTQAHR 71

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + + G+V  R     N  I TG++E+SA  + +L  +  LP  +  +    E  
Sbjct: 72  LRSEFCVAVTGVVEIRPEGNANPEIATGEVEVSATSLTVLGESAALPFQL--DETAGEEA 129

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+     I  R+++  + R  +   +F+E  TP LT S+PEGARDFLVP+
Sbjct: 130 RLKYRYLDLRREVPGNAIRLRSKVNAAARSVLAEHDFVEIETPTLTRSTPEGARDFLVPA 189

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 190 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 248

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + DD++   E +L+ ++     G  +     RI + DA+RR+G+DKPD+R  + +   T+
Sbjct: 249 DADDVIAVSEQILKAIWALI--GYDLPLPLPRISHADAMRRFGSDKPDMRFGLELVECTD 306

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F+ + FRVF           V A+   GG    R   D   E+A+ +G  GLAY+   +
Sbjct: 307 YFMDTPFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVL--V 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPVAK+L+    + +   +    GD  FF AG      +     R  +A+ 
Sbjct: 358 GEDGELG--GPVAKNLSDAERDGLASHVGANPGDCVFFSAGSAKAARALLGATRIEVAKR 415

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI----------DFAHNPFTMPQGGMESLKGND 473
           L +I+ + + F W++D+P +E  ++                AH+ FT P+   E+    D
Sbjct: 416 LDLIDPSAWAFTWVVDWPLFEPADDATASGDVAVGSGAWTAAHHAFTAPKPESEATFDTD 475

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  A  YD+VCNG EI  G IR H S++  + F+ +GI  +   ++FG L  AF  G 
Sbjct: 476 PGSAMADAYDIVCNGNEIGGGSIRIHRSDIQERVFAMMGIDHDEARDKFGFLLDAFTFGA 535

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G DRIV LL G  ++REV  FP S    D L  +P+ ++  Q +E G  I  
Sbjct: 536 PPHGGIAFGWDRIVALLAGLDSIREVIAFPKSGGGVDPLTDAPAPITALQRKESG--IDA 593

Query: 594 NPKKILK 600
            P+K+ K
Sbjct: 594 KPEKLDK 600


>gi|257452137|ref|ZP_05617436.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317058682|ref|ZP_07923167.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684358|gb|EFS21193.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 594

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 231/584 (39%), Positives = 346/584 (59%), Gaps = 18/584 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60
           YR+H+ G+L   ++G  V LSGWV   R  GG+ F+D+RD  G TQ+V + D       E
Sbjct: 3   YRSHNLGELRKENIGQVVTLSGWVDTKRDLGGLTFIDLRDREGKTQIVFDIDYTNKDIIE 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
            A+ +R+E V+ + G V  R+++  N NI TG+IE+  +++E+L+  + LP  + G E  
Sbjct: 63  TAQKLRNEAVIKVVGEVKERASK--NLNIPTGEIEVFVKELEVLNQCDVLPFQITGTEEN 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+IR KYR+LD+RR  + +N+  R R+I ++R  M    F++  TPILT S+PEGARD
Sbjct: 121 LSENIRLKYRYLDIRRPKMIQNLKMRHRMIMAIRNYMDQAGFLDVDTPILTKSTPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR+N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD+
Sbjct: 181 FLVPSRINGGTFYALPQSPQIFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLDV 239

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV QDD++N +E + + VF+  + G   +  F R+ Y  A+  YG+DKPDLR  + +
Sbjct: 240 EMSFVTQDDVMNEIEGLAKYVFKHVT-GEEANYTFERMPYAIAMGEYGSDKPDLRFEVKL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQ-GQPGL 356
            ++++    S F+ FS   +V  G  V AI  P      +R       ++A+   G  G+
Sbjct: 299 KDLSDVVAKSSFKAFSA--TVENGGIVKAIVAPKAFEKFSRKVLGEYEDYAKQYFGAKGM 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AYI  ++ E+G ++   P+AK       +AI  R     GD    IA       +     
Sbjct: 357 AYI--KIAENGEIS--SPIAKFFQEDEMKAILERTGAGAGDVILIIADRAKTVHAALGAL 412

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLL 475
           R  + +ELG+I+ N ++F W++DFP +E++EEE +    H+PFT + +  ME        
Sbjct: 413 RLRLGKELGLIDMNSYKFLWVVDFPMFEYDEEEGRYKAEHHPFTSIKEEDMEKFLAGQTD 472

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           +I+   YDLV NG EI  G IR   +E+  + F  + +S E  + +FG    AF+ G PP
Sbjct: 473 NIRTNTYDLVLNGSEIGGGSIRISNTELQAKVFERLSLSPEEAKEKFGFFLDAFKYGAPP 532

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
           HGG+A GIDR +M++L  +++R+V  FP +     L+  +P  V
Sbjct: 533 HGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPGKV 576


>gi|317481697|ref|ZP_07940729.1| aspartyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916811|gb|EFV38201.1| aspartyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 599

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/605 (38%), Positives = 347/605 (57%), Gaps = 39/605 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V L+GWV R R HGG+ F+D+RD  G+ QVV   +    ++A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVIYDE----DMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117
            +RSE+V+ I G V  R     N +++TG+IE+ A+ IEIL+ ++ LP  V        E
Sbjct: 62  PLRSEFVIQITGEVRLRPDGNENTHLVTGKIEVVAETIEILAKSDALPFQVSTALENESE 121

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294
           LDMEM++V+Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFG 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353
           NP++   +TE+F ++ FRVF           V A+  KGG    R   D   +WAR +G 
Sbjct: 299 NPLV--ELTEYFKNTPFRVFQAPY-------VGAVVFKGGAATPRRQFDAWQDWARQRGA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAY+     E+G +   GPVAK+L+      +R  +  ++GD+ FF AG         
Sbjct: 350 KGLAYVV--FGENGELK--GPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESAQLLL 405

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464
              R  +A   G+++   F F W++DFP ++  ++    D A         H+PFTMP  
Sbjct: 406 GAVRVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D     +  YD+VCNG E+  G +R H  ++  +    +GI+KE  + +FG 
Sbjct: 466 DWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGF 525

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPH G+A G DR V +L GA ++R+V  FP +    D L G+P+ +S EQ 
Sbjct: 526 LLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585

Query: 585 RELGL 589
            E G+
Sbjct: 586 AETGV 590


>gi|148243537|ref|YP_001228694.1| aspartyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|166225439|sp|A5GWT2|SYD_SYNR3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|147851847|emb|CAK29341.1| Aspartyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 604

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 222/598 (37%), Positives = 349/598 (58%), Gaps = 22/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+HSCGDL    + S V LSGWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSHSCGDLRSDAIDSTVLLSGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGAEAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELP--LPVFGERE 119
           + +R+E VL ++G V +R  E+ N  + TG++E+ AQ++++L+  +  LP  + V  + +
Sbjct: 62  EHLRNETVLQVEGRVRARPDESRNERLATGEVEVLAQRLKVLNAPSRNLPFAVSVHDDEQ 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR+ + +N+  R + + + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 VREELRLRHRYLDLRRERMRRNLSLRHQTVQTARRFLEDEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLDM
Sbjct: 182 YLVPSRVCGGEWFALPQSPQLFKQLLMVGGLERYYQVARCFRDEDLRADRQP-EFTQLDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q+ IL+  E ++ G   +   G  +S    R+ + +A+ RYGTD+PD R  + +
Sbjct: 241 EMSFLDQEQILDLNERLI-GRIWKLVKGVELSLPLPRMTWHEAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN------EWARSQGQ 353
             V++      F+VFS  ++     +   +P   GG ++    R+         A+  G 
Sbjct: 300 VGVSDIVADMGFKVFSGAVAAGGSVKCITVP---GGNDKVSNVRIKPGGDVFSEAQKAGA 356

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLA+I  R+ + G +  +G +  +L+      +  R   + G    F AGD        
Sbjct: 357 GGLAFI--RVRDGGEIDTIGAIKDNLSDEKKAQLLQRTGAEPGSLILFGAGDTATVNKAL 414

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMESL 469
              R ++A+EL ++    + F W++DFP +E+N +E +++  H+PF        G   +L
Sbjct: 415 DRVRQYLAKELEMVPAEAWNFLWVVDFPMFEFNADENRLEALHHPFCAANPEDLGDDPAL 474

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
               L + +A  YDLV NG E+  G +R H + +  Q    +G+++E  + +FG L  A 
Sbjct: 475 WSERLPTARAQAYDLVLNGLELGGGSLRIHDAALQNQVLQTIGLAQEEAQEQFGFLLEAL 534

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           + G PPHGGIA G+DR+VMLL G +++R+   FP +Q    L+  +P   S +QL EL
Sbjct: 535 EMGAPPHGGIAFGLDRMVMLLAGEESIRDTIAFPKTQQARCLMTSAPGGASDKQLEEL 592


>gi|86132448|ref|ZP_01051042.1| Aspartyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85817009|gb|EAQ38193.1| Aspartyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 582

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 233/592 (39%), Positives = 339/592 (57%), Gaps = 17/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60
           YRTH+ G L  +DV   V L+GWV + R  G II++D+RD YG+TQ+V +    D+A  E
Sbjct: 2   YRTHNNGSLRAADVNKEVTLAGWVQKSRDKGFIIWVDLRDRYGMTQLVFDQERTDAALME 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +  E+V+ + G V+ R ++  N NI TG IEL   K+EIL+ +   P  +  E + 
Sbjct: 62  EARKLGREFVIQVTGTVVERDSK--NPNIATGDIELLVSKLEILNASLTPPFTIEDETDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR  + ++++ R R+   +R  +  ++FIE  TP L  S+PEGARDF
Sbjct: 120 GEDLRMKYRYLDIRRKPVRESLIFRHRVALEVRKYLSEQDFIEVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DILN  E + R + +E  NG  +   F R+ YDDA+R YG DKPD+R  +   
Sbjct: 239 MAFVEQEDILNIFEGLTRHLLKEV-NGVEIE-KFPRMLYDDAMRLYGNDKPDIRFGMKFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
            + E   H +F VF      N    V  I   GG    R   D++ EW +      L  +
Sbjct: 297 ELNEVAQHKDFGVF------NNAELVVGIAVPGGNSYTRKEIDKIIEWVKRPQVGALGMV 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R ++ G+      V K  +  +          Q GD    ++GD  K  +  +  R  
Sbjct: 351 YSRCNDDGSFK--SSVDKFYDQEDLAKWAEVTGAQKGDLVCILSGDTNKVRAQMSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ LG+   + F   W++DFP  E +EE       H+PFT P+ G   L       +KA
Sbjct: 409 LAERLGLRKPDEFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQIELLDTKPGEVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H  E       ++G S+E  + +FG L  AF+ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKETQAIMLRHLGFSEEEAKAQFGFLMDAFEYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+V +L G + +R+   FP + +  D+++ +P+ +  EQL+EL L++
Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAPLDNEQLQELNLKL 580


>gi|227872750|ref|ZP_03991073.1| aspartate--tRNA ligase [Oribacterium sinus F0268]
 gi|227841411|gb|EEJ51718.1| aspartate--tRNA ligase [Oribacterium sinus F0268]
          Length = 597

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/598 (38%), Positives = 351/598 (58%), Gaps = 16/598 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           +RT  CG+LG   +G  V + GWV + R  GG+IF D+RD  GI Q++   +   +  FE
Sbjct: 9   HRTARCGELGEEYIGKTVCMMGWVQKSRNKGGLIFTDLRDRSGILQILFEENECGAEVFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +R+E+V+ ++G + SR  +  NA++ TG +EL A+ + IL+ AE  P P+  + + 
Sbjct: 69  KASKLRAEFVIAVEGELRSRGKDA-NASLATGAVELVAKSLRILAEAETPPFPIEEDSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  L K I+ R R+   +R  +  E F+E  TP L  S+PEGARDF
Sbjct: 128 KEDLRLKYRYLDLRRPDLAKRIMTRARLSQLIRAFLSREGFLEIETPTLIKSTPEGARDF 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QGSFYALPQ+PQ  KQLLM SG DRYFQ+A C+RDED R+DR P EF Q+DME
Sbjct: 188 LVPSRLHQGSFYALPQSPQLLKQLLMVSGMDRYFQLARCYRDEDLRADRQP-EFTQVDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ +D+L   E +L+ +F+E    + +S    R+ + DA+  YG+DKPDLR  + + 
Sbjct: 247 LSFVDMEDVLEVNERLLQYIFKEICQVD-ISLPLQRMTWIDAMENYGSDKPDLRFDLPLL 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
             TE      F VFS+   V  G +V  I  KG     R   D   E  +     GLA+ 
Sbjct: 306 ECTEAVRGCGFSVFSQ--CVENGGKVKGILLKGQASMPRKKIDSYVELVKGYQAKGLAWF 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            +   E G+V      AK ++  + + +     ++ GD  F ++ +  +    +  A R 
Sbjct: 364 GYA--EDGSVK--SSFAKFMSEEDVKRLTEATGLEQGDLLFLVSDEKKQVVWNSLGALRL 419

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSI 477
            + ++L +I    ++F W+ +FP +E++EE  +    H+PFTMP +  +  +   DL  +
Sbjct: 420 ALGKDLDLIQKGQWKFLWVTEFPMFEYSEELGRYQAMHHPFTMPMEEDLPLVDEEDLSRV 479

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G +R H S V  +    +G +KE    +FG L  AFQ G+PPH 
Sbjct: 480 RAKAYDIVLNGTELGGGSVRIHQSHVQEKMLEKLGFTKERATEQFGFLLEAFQYGVPPHA 539

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV-SVEQLRELGLRIVEN 594
           G+A G+DR+ M ++GA+++R+V  FP  ++  D +M +P+ V   +QL++L + I E 
Sbjct: 540 GLAYGLDRLAMWMVGAESIRDVIAFPKGKDGSDAMMDAPAEVFDPQQLKDLHIAITEE 597


>gi|296394114|ref|YP_003658998.1| aspartyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181261|gb|ADG98167.1| aspartyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 601

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 245/604 (40%), Positives = 335/604 (55%), Gaps = 31/604 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L  + +G+ V L+GWV R R HGG+IF+D+RD  GI QVV   D      A +
Sbjct: 2   RTHLAGELRENHIGTDVVLTGWVARRRDHGGVIFVDLRDKSGIAQVVFR-DGDVLARAHA 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-ES 123
           +R+E+ L I+G+V  R   + NA + +G +E+     E+LS +  LP P+    E P E 
Sbjct: 61  LRAEYCLKINGVVDRRPEGSENAALGSGAVEVGVTSFEVLSESAPLPFPL---DEPPGEE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            RF YR+LDLRR    + +  R+ +  + R  ++  +F E  TP LT S+PEGARDF+VP
Sbjct: 118 TRFHYRYLDLRRPEAAQMLRLRSTLNAAARRVLLDRDFTEVETPTLTRSTPEGARDFIVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R+  GS+YALPQ+PQ +KQLLM +G +RYFQ+A C+RDED R+DR P EF QLD+EMSF
Sbjct: 178 ARLKPGSWYALPQSPQLFKQLLMVAGLERYFQLARCYRDEDFRADRQP-EFTQLDLEMSF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V QDD++   E V+  V+     G        RI Y +A+RRYG+DKPDLR  + + + T
Sbjct: 237 VTQDDVIALAEEVVAAVWGVL--GEAPELPLPRISYAEAMRRYGSDKPDLRFGVELVDCT 294

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWR 362
           ++F  + FRVF           V A+   GG G  R   D   +WAR +G  GLAY+   
Sbjct: 295 DYFKDTPFRVFQ-------AEHVGAVVMAGGAGQPRRALDGWQDWARQRGAKGLAYVL-- 345

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G ++  GPVAK+L+    + +   +  + GD  FF AGD     S    AR  IA 
Sbjct: 346 IGEDGELS--GPVAKNLSEAERDGLAEHVGAKPGDCVFFAAGDANSARSLLGAARVEIAT 403

Query: 423 ELGII-NCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKG 471
            LG++ N   + F W++DFP  E   + K   D A         H+ FT P     +   
Sbjct: 404 RLGLLDNAPKWAFAWVVDFPLLEPAAQAKAAGDVAVGEGAWTAVHHAFTAPSEESLATLE 463

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D  S  +  YDLVCNG EI  G IR H  EV  +    +G  +E  +  FG L  AF  
Sbjct: 464 QDPGSALSQAYDLVCNGHEIGGGSIRIHRREVQERVLKLMGFDQERAQAAFGFLLDAFSY 523

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G DRI  LL G  ++REV  FP S    D L G+P  ++  Q  E G+  
Sbjct: 524 GPPPHGGMAFGWDRITALLAGVDSIREVIAFPKSGGGQDPLTGAPGAITPSQRAETGVDF 583

Query: 592 VENP 595
              P
Sbjct: 584 KPGP 587


>gi|148240794|ref|YP_001226181.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|166225438|sp|A5GPL9|SYD_SYNPW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|147849333|emb|CAK24884.1| Aspartyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 611

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 231/604 (38%), Positives = 347/604 (57%), Gaps = 30/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL    + + V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSNGCGDLRKEHIDNSVQLCGWVDRRRDHGGVIFIDLRDRTGTVQITVDPDLGAEAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119
           + +RSE VL I G V +R AE++N  + TG +E+ A  I +L SV   LP PV    E  
Sbjct: 62  EHLRSETVLQISGKVRARPAESLNEKLATGAVEVLASGITVLNSVKGNLPFPVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR  ++ N+  R + I + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAQTIQAARRFLEDEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YVLPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q++IL   E+++  +++    G  +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQEEILQLNESLICSIWKAV-KGIDLPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351
            NV++      F+VFS  +      +  A+P    GGN A          D  +E A+  
Sbjct: 300 TNVSDIVKDMGFKVFSGAVKNGGAVKCIAVP----GGNEALSNVRIKPGGDVFSE-AQKA 354

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLA+I  R+ + G +  +G +  +L+    + +  R   + G    F AGD      
Sbjct: 355 GAGGLAFI--RVRDGGEIDTIGAIKDNLSDEQKQELLSRTGAEPGTLLLFGAGDTATVNK 412

Query: 412 FAADARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ---- 463
                R ++A+ELG++      + + F W++DFP +E+N +E + +  H+PF  P     
Sbjct: 413 ALDRVRQYLAKELGMVKADRDNDQWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNAEDL 472

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
           G   S   + L   +A  YDLV NG E+  G +R H S +  Q    VG+  E  + +FG
Sbjct: 473 GSDASQWADTLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQEQFG 532

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            L  A   G PPHGG+A G+DR+VMLL G +++R+   FP +Q    L+  +P  V+ +Q
Sbjct: 533 FLMDALDVGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFPKTQQARCLMTNAPGGVADKQ 592

Query: 584 LREL 587
           L EL
Sbjct: 593 LEEL 596


>gi|331007229|ref|ZP_08330436.1| Aspartyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418945|gb|EGG93404.1| Aspartyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 597

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 236/605 (39%), Positives = 349/605 (57%), Gaps = 41/605 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG L    +   V L GWV R R HGG+IF+D+RD  GI QVV +PD    F +A 
Sbjct: 2   RSEYCGALNTEFIDQTVTLCGWVDRRRDHGGVIFIDLRDRDGIVQVVFDPDGKENFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL + G V +R+  T+N N+ TG++E+    + IL+ +E  P P+       E 
Sbjct: 62  KVRSEYVLQVTGKVRARNGATVNKNMPTGEVEVYGTDLVILNASETPPFPLNEHNTVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R+LDLRR  +  N+  R+++  +MR  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKFRYLDLRRQEMQNNLRIRSKVTTAMRNYLDDNGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHEGKFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  ++I++  E ++  +F+  S  +    +F R+ Y +AI +YG+DKPDLR P+ + ++ 
Sbjct: 241 MSDEEIMSVTEGMINALFK--SQMDIELGSFPRMPYSEAIAKYGSDKPDLRIPLELVDIK 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361
           +     EF+VFS   + +P   + AI   GG     R   D   ++    G  GLAYI  
Sbjct: 299 DLLTDVEFKVFSGPAN-DPNGRIAAINISGGNDKLTRKQIDAYTKFVGIYGAKGLAYI-- 355

Query: 362 RLDESGNVAG--MGPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           ++++  ++      P+ K L N V T AI  RL  ++GD  F           F AD  N
Sbjct: 356 KVNDKDDIENGLQSPIVKFLPNDVRT-AIVERLGAENGDLIF-----------FGADKAN 403

Query: 419 HIAQELGIINCNCFE-----FC-----WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
            + + LG + C   E      C     W++DFP +E  E +      H+PFT P    E+
Sbjct: 404 IVTESLGALRCKLGEDLDLYTCEWAPLWVVDFPMFE--ETDAGWTSLHHPFTAPACSPEA 461

Query: 469 LKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
           LK N  + LS+    YD+V NG E+  G IR H  ++    F  +GI +E    +FG L 
Sbjct: 462 LKANPGEALSVA---YDMVLNGTELGGGSIRIHDPKMQQTVFEILGIGEEEQREKFGFLL 518

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            A Q G PPHGG+A G+DR++ML+ G+ ++R+V  FP +Q    ++  +P  V  +QLRE
Sbjct: 519 DALQYGAPPHGGLAFGLDRLIMLMTGSGSIRDVIAFPKTQTAACVMTDAPGGVDRKQLRE 578

Query: 587 LGLRI 591
           L + +
Sbjct: 579 LNIAL 583


>gi|203284356|ref|YP_002222096.1| aspartyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|238690563|sp|B5RM04|SYD_BORDL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|201083799|gb|ACH93390.1| aspartyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 585

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/591 (36%), Positives = 339/591 (57%), Gaps = 9/591 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++   C  +    +   + ++GWV ++R HG + F++IRD Y   Q++ + D    +I  
Sbjct: 2   FKIIKCNQINNKLINKKIEINGWVKKIRNHGKVTFINIRDRYDEAQILVS-DEKLLKITS 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + I G +  R  E +N  + TG++E+ A+ I+I+S   ELP  +       ++
Sbjct: 61  QIKMEYCIKIQGKLNLRPLELVNREMKTGELEIIAENIDIISKCNELPFMIENNNNASDN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + +YR+LDLRR+   + I+ R+++I+ +R  +  ++F+E  TP    S+PEGARDFLVP
Sbjct: 121 SKLEYRYLDLRREEQKQKIILRSKVIHIIRNHLTKQDFLELETPTFVKSTPEGARDFLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++G FYALPQ+PQ YKQL M +G D+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGHFYALPQSPQIYKQLAMIAGLDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++++I   +EN++  +F+   N  T+   F +I Y DA+  YG+DKPD R  +++ +++
Sbjct: 240 IKKENIFKLIENLIFTIFKNSLNI-TLPKKFKKITYKDAMNIYGSDKPDTRYELLIQDMS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +    S F VF   L      +   I  +    +R+  + + E A+      L   F ++
Sbjct: 299 KALKQSPFDVFKDTLQNKGTIKALIIKNQAHNFSRSKINSLEEHAKLYKARTLY--FTKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           +   N    G +AK +N +    I     +++ D  FFIA      C      R  IA E
Sbjct: 357 E---NNEFTGGIAKFINPIKKTLIET-YSLKNNDLIFFIADLWETACKAIGQIRIKIATE 412

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +IN N FEF WI DFP +E++E+ +    AH+ F+MPQ    +   ++   +    YD
Sbjct: 413 LNLINKNIFEFLWIYDFPLFEYDEDTQSYKAAHHMFSMPQAKYINTLESNPSEVLGEVYD 472

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG E+ SG IR H  E+  + F+ VG + ++ E RFG   +A + G P HGGIA GI
Sbjct: 473 LVLNGTELGSGSIRVHTKELQQRIFNIVGFNDKIAEERFGFFLKALEYGAPIHGGIAIGI 532

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR++ML+  + ++++V LFP +      L  SPS +S EQL+EL L I  N
Sbjct: 533 DRLLMLMTNSNSIKDVILFPKNSFAASPLDKSPSKISNEQLKELNLTIENN 583


>gi|157737027|ref|YP_001489710.1| aspartyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166979739|sp|A8ESW7|SYD_ARCB4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157698881|gb|ABV67041.1| aspartyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 589

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 231/594 (38%), Positives = 340/594 (57%), Gaps = 20/594 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH C D+    +G  V ++GWV+  R HGGIIF+D+RD  G+ Q+VA+P        IA
Sbjct: 2   RTHYCTDVTEKLIGQTVTVAGWVNSRRDHGGIIFIDLRDKSGLVQLVADPQDCKDALAIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VR E+VL   G V +R     N N+ITG+IE+  + + I + +  +P  +  E+   E
Sbjct: 62  ETVRDEFVLIATGKVRARGEGLENPNLITGKIEIILENLVIENRSRPMPFDINDEKVNDE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            I+ + RFL+LR          R++     R  +    F++  TPILT S+PEGARD+LV
Sbjct: 122 -IKLRNRFLELRSKKSFDIFQLRSKATIQARNTLDELGFLDVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFD+YFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHAGEFYALPQSPQLFKQLLMVAGFDKYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+D++   E ++  +F +   G  V + F R+ Y +A+ +YG+DKPDLR  + + +V
Sbjct: 240 FCNQEDVIKVAEKLIYDIFTKC--GKNVPSTFRRMKYSEAMEKYGSDKPDLRFDMPLVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGLAY 358
            + F +S   +F++I        + A+  K   G+  F  R      ++ R  G  GL Y
Sbjct: 298 IDIFANSTNEIFAEIAKDKKNNRIKALKCK--NGDNIFSKRQMKSFEDYVRKFGAKGLGY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
             +++ E G     GP+ K  +  + E I    +++ GD  FF AG       +    R 
Sbjct: 356 --FQMKEDGL---KGPLTKFFSEADLEEIIKVTELEVGDVVFFGAGAKKVVWDYMGRFRL 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG-NDLLSI 477
            +A E+ I+  + +EF W++DFP +E   E+ +    H+PFTMP      L    DL  I
Sbjct: 411 FLANEMNIVPKDAYEFLWVIDFPMFEV--EDGRTKALHHPFTMPNVEKYDLDNIEDLEEI 468

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           ++  YD+V NG E+  G IR H  E+  + F  +GIS+E  + +FG L  A   G P HG
Sbjct: 469 ESIAYDIVLNGTELGGGSIRIHKEEIQSKVFKLMGISQEEAKEKFGFLLDALSYGAPSHG 528

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G A G+DR++MLL G  ++R+V  FP +Q    LL  +PS V  EQL+EL +RI
Sbjct: 529 GFALGLDRMIMLLAGTDSIRDVIAFPKTQKAQCLLTQAPSAVDEEQLKELSIRI 582


>gi|237742493|ref|ZP_04572974.1| aspartyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229430141|gb|EEO40353.1| aspartyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 592

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 234/601 (38%), Positives = 351/601 (58%), Gaps = 30/601 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+ G+L V ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLGELRVKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NLNIPTGEIEVFAKEIEILNACDTLPFQISGIDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  + G   +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P      +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKVISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L   G  +   P+AK L+    +AI  + + + GD  F +A       S     R
Sbjct: 359 YI--KLTADGITS---PIAKFLSEEEMKAIIEKTEAKTGDVIFIVADKKKVVASALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT       S+K  DL   
Sbjct: 414 LKIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDLDKF 466

Query: 478 KAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
            A Q        YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF
Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFLDAF 526

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL +
Sbjct: 527 KYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFI 586

Query: 590 R 590
           +
Sbjct: 587 K 587


>gi|255068294|ref|ZP_05320149.1| aspartate--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255047486|gb|EET42950.1| aspartate--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 602

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 234/598 (39%), Positives = 352/598 (58%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFATAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNTAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFQDALGVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++  N++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVSNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGA-DKAKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++E+  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGAENGYFVDEWKPLWVVDFPMFEYDEDGDRWAAMHHPFTSPKLGHEDLMASD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PENCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELSLRL 592


>gi|256545122|ref|ZP_05472488.1| aspartate--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256399163|gb|EEU12774.1| aspartate--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 585

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 222/596 (37%), Positives = 344/596 (57%), Gaps = 14/596 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           M   R+H CG+L   ++G  V L GWV + R  G ++F+D+RD  GITQ+V    D+  +
Sbjct: 1   MEFKRSHMCGELREENIGDEVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVTREDDNENY 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +IAK V  E+VL + G V  R  E+ N  I TG IE+ A KI IL  A+  P+ +  + +
Sbjct: 61  KIAKDVAGEYVLEVKGEV--RERESKNPEIPTGNIEIIASKINILDKAKTPPIYIKEDDD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+++ KYR+LD+R+ ++ KN+  R+ I+  MR  M    F E  TP LT  +PEGARD
Sbjct: 119 VSENLKLKYRYLDMRKQSVQKNLKLRSDIVRCMREYMYDNGFTEVETPFLTKPTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVNQG FYALPQ+PQ  KQLLM    DRYFQI  CFRDED R++R P EF QLD+
Sbjct: 179 YLVPSRVNQGKFYALPQSPQLMKQLLMIGSLDRYFQIVKCFRDEDLRANRQP-EFTQLDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E+SF +QDD++   E +L+ +F+ F++ + +     R+ Y +A+  YG+DKPDLR    +
Sbjct: 238 ELSFADQDDVIKVNEGLLKTLFDNFTDYD-LKLPIQRMDYSEAMNSYGSDKPDLRYGYKI 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLA 357
           ++++E F   +F+VF+   ++  G+ V AI  KG  GN  R   D++ ++ +  G  GL+
Sbjct: 297 NDISEIFKDCDFKVFTD--NIKEGHSVRAINFKGQAGNYSRKQLDKLTDFVKDYGLKGLS 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +I +   +  N +    + K L     + +  +LD+ D D     A             R
Sbjct: 355 FIKFNSKDDINSS----IKKFLTDEIVKNLIEKLDISDNDLILIGADKNKTVLEGLGALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A++  +     + FCW+++FP +E++EEE +    H+PFTMP      L   +   +
Sbjct: 411 RKVAKDQNLYEKE-YAFCWVVNFPMFEYSEEEDRYVSQHHPFTMPNEEDIDLLLTEPEKV 469

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +   YD+V NG E+  G +R +  E+  + F  + +S + +E +FG    A Q G PPH 
Sbjct: 470 RTQAYDIVINGDEMGGGSVRINNQELQEKVFKALKLSDDDIEQKFGFFIEALQYGTPPHA 529

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G+A G+DR+VML    +N++++  FP +Q+    L  +PS V  + L EL + + E
Sbjct: 530 GLAYGLDRLVMLFAKTENIKDIIAFPKTQSATCPLTQAPSIVDEKSLNELSIEVKE 585


>gi|110801685|ref|YP_699209.1| aspartyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|123341659|sp|Q0SRP8|SYD_CLOPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110682186|gb|ABG85556.1| aspartate--tRNA ligase [Clostridium perfringens SM101]
          Length = 597

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 236/595 (39%), Positives = 347/595 (58%), Gaps = 17/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R   CGD   S +G  V + GWV R R  GG+ F+D+RD  GI QVV N D      E A
Sbjct: 10  RNIMCGDARESHIGQKVTVMGWVQRNRNLGGLQFIDLRDREGILQVVFNDDLGEEILEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           KS+R E+ + + G ++ R  E++N N+ TG +EL A++++ILS ++  P+ +  + +  E
Sbjct: 70  KSIRPEYCIAVTGEIVKR--ESVNPNMPTGMVELKAEELKILSESDTPPIYIKEDLDAAE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           SIR KYR+LDLRR  +      R +   ++R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 128 SIRLKYRYLDLRRPDMQNIFKIRHKTTKAIRDYLDQNGFLEMETPILTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R++R P EF Q+D+EMS
Sbjct: 188 PSRNYPGMFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRANRQP-EFTQVDLEMS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDD++   E +++ VF+E   G  V     R+ + DA+ +YG+DKPDLR  + + N+
Sbjct: 247 FVEQDDVMALNECLIKHVFKEVL-GVDVKTPIKRMTFKDAMEKYGSDKPDLRFGMEITNL 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           ++      F+VF+   +V  G  V  +  +GG    R   DR+ E+ ++    GLA+I  
Sbjct: 306 SDVVKECGFKVFTD--AVANGGSVRGLCLEGGASMGRKDIDRLGEFVKTFKAKGLAWI-- 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +L E G  +   P+AK  +      I   +  + GD    +A           + R  ++
Sbjct: 362 QLKEEGVKS---PIAKFFSEEELNKIIETMGAKTGDLILIVADKNSVVLKALGELRLELS 418

Query: 422 QELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           ++  ++     F F WI +F   E++EEE +   AH+PFTMP          D   ++A 
Sbjct: 419 RKFDLVKDKSEFNFTWITEFDLLEYDEEEGRYFAAHHPFTMPMDEDIKYLDTDPGRVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H +++  + F  +G ++E    RFG L  AF+ G PPHGG+A
Sbjct: 479 AYDLVLNGEELGGGSIRIHDTKLQEKMFEVLGFTQESAWERFGFLLEAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR++M L G +N+++V  FP +QN FC  L  +P+ V  EQL+ELG+  ++ 
Sbjct: 539 FGLDRMIMFLAGTENIKDVITFPKNQNAFC-YLTEAPNIVDEEQLKELGIETIKK 592


>gi|238788524|ref|ZP_04632317.1| Aspartyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238723437|gb|EEQ15084.1| Aspartyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 597

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 237/593 (39%), Positives = 351/593 (59%), Gaps = 15/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFAHTLNIINRSE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E + G ++  +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQE-TKGVSL-GDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V A+   GG    R   D   ++    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQVTRKQIDEYTQFVSIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
            D +  + G+  PVAK L+    EAI VR   + GD  FF A D  K  + A  A R  +
Sbjct: 356 -DRAAGIEGVQSPVAKFLSADVLEAILVRTQAESGDILFFGA-DSDKVVTDAMGALRLKV 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
            ++L +     +   W++DFP +E ++ E  +   H+PFT P+    E L      +I A
Sbjct: 414 GRDLQLTQLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKDMSPEQLAAAPTTAI-A 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H +E+  Q F  +GI++     +FG L  A + G PPH G+
Sbjct: 472 NAYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V
Sbjct: 532 AFGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584


>gi|238762973|ref|ZP_04623940.1| Aspartyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238698731|gb|EEP91481.1| Aspartyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 598

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/593 (39%), Positives = 347/593 (58%), Gaps = 15/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANALNIINRSE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V A+   GG    R   D   ++    G  GLA++   
Sbjct: 297 DLVKEVEFKVFSGPANDAKG-RVAALRVPGGAQVTRKQIDEYGQFVSIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
            D +  V G+  P+AK L+    EAI  R   + GD  FF A D  K  + A  A R  +
Sbjct: 356 -DRAAGVEGVQSPIAKFLSAEVLEAILARTQAESGDILFFGA-DSYKIVTDAMGALRLKV 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
            ++L +     +   W++DFP +E ++ E  +   H+PFT P+    E L      +I A
Sbjct: 414 GRDLALTKLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKDMSPEQLAAAPTTAI-A 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H +E+  Q F  +GI++     +FG L  A + G PPH G+
Sbjct: 472 NAYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V
Sbjct: 532 AFGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584


>gi|170691432|ref|ZP_02882597.1| aspartyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170143637|gb|EDT11800.1| aspartyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 599

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 238/593 (40%), Positives = 342/593 (57%), Gaps = 10/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F+ A+
Sbjct: 4   RSEYCGLVTEELLGQTVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L I G+V +R   T NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  DVRNEFCLQIKGVVRARPEGTTNAALKSGKIEVLCHELIVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDTLGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+E + G ++   F  + Y +A+RR+G+DKPDLR  +   ++T
Sbjct: 242 LSEQEIRDLFEAMIRHVFKE-TIGVSLDEKFPVMEYSEAMRRFGSDKPDLRVKLEFTDLT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAVKDVEFKVFSTPANSKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422
              G      P+ K+L+    +AI  R   QDGD  FF A D  K  + +  A R  I  
Sbjct: 361 VAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            E G  N    + ++  W++DFP +E++EE+ +   AH+PFT P+        +D     
Sbjct: 420 SEFGKANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLESDPARCL 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R H  EV  + F  + I+ E  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSEVDERQLRELHIRL 592


>gi|312131843|ref|YP_003999183.1| aspartyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908389|gb|ADQ18830.1| aspartyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 581

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 228/593 (38%), Positives = 342/593 (57%), Gaps = 21/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH+CG+L +S+V     L GWV ++R  GG+I++D+RD YGITQ++      D+A    
Sbjct: 3   RTHTCGELRMSEVNQSATLCGWVQKIRDKGGMIWIDLRDRYGITQLIFEEGKTDAAVIAK 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+  E+V+   G V  R A+  N  I TG IE+S   I+IL+ A+  P  +  + +  
Sbjct: 63  ARSLGREFVISATGKVQERLAK--NDKIPTGDIEISVDDIQILNPAKLPPFLIEDDTDGG 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R K+R+LDLRR+T+ +N+  R ++    R  M A +FIE  TP+L  S+PEGARDF+
Sbjct: 121 DELRMKFRYLDLRRNTVRQNLALRHKVAQQTRIYMDANDFIEVETPVLIKSTPEGARDFV 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D EM
Sbjct: 181 VPSRMNPGEFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDCEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D+LN  E ++R +F+     +       R+ Y DA+R YG+DKPD R  +    
Sbjct: 240 SFVEQEDVLNMFEGLIRHLFKTVKGIDL--PEVPRMTYADAMRLYGSDKPDTRFGMQFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQ--GQPGLAY 358
           + +      F+VF      +    V  I A G     R   D + +W +    G  GL Y
Sbjct: 298 LNDLVQGKGFQVF------DDAELVVGIKADGCAEYTRKQIDELTDWVKRPQIGAKGLVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  R++  G++     V K     + +AI  R + + GD    ++G   K      + R 
Sbjct: 352 I--RVNTDGSIK--SSVDKFYTPEDLQAIAARFEAKPGDLILILSGTKDKARKQLNELRL 407

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +   LG+ N   ++  W++DFP  E+ EEE++    H+PFT P+    +L   DL  ++
Sbjct: 408 EMGSRLGLRNPEEYKVLWVLDFPLLEYGEEEQRWFAMHHPFTAPKPEDLALLDKDLGQVR 467

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG E+  G +R    E+  + F  +G + E  + +FG L  AF+ G PPH G
Sbjct: 468 ANAYDLVINGTEVGGGSVRIFQKELQGKMFEILGFTPEEAKKQFGFLMEAFEYGAPPHAG 527

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G DR+  +  GA ++R+   FP + +  D+++ SPST+  +QL+EL +++
Sbjct: 528 LAFGFDRLCAIFGGADSIRDFIAFPKNNSGRDVMIDSPSTLHEDQLKELNIQV 580


>gi|191638515|ref|YP_001987681.1| aspartyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|238693044|sp|B3WEM2|SYD_LACCB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|190712817|emb|CAQ66823.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Lactobacillus casei BL23]
 gi|327382551|gb|AEA54027.1| Aspartyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327385748|gb|AEA57222.1| Aspartyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 601

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/591 (38%), Positives = 331/591 (56%), Gaps = 15/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT   GD+    V   V L GWV + R  G +IF+D+RD  GI Q+V +   D     +A
Sbjct: 4   RTCYAGDVTAEYVDQEVTLKGWVQKRRSLGSLIFIDLRDREGIVQLVFSEEFDKDALAVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVRSE+V+ + G+V  R  + +N ++ TG +E+    I IL+ A+  P  +       E
Sbjct: 64  NSVRSEYVIEVQGVVKKRKPQAVNKDMKTGDVEVEVHTITILNKAKTPPFYIEDGVAVTE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             + KYR+LDLRR  + KNI  R  I+ S+   +    FI+  TP LTAS+PEGARD+LV
Sbjct: 124 ETKLKYRYLDLRRPEMQKNIFTRAHIMRSVHHFLDDNGFIDVETPTLTASTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGSFYALPQSPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I +  E ++  V  +   G  V   F RI + DA+ +YG+DKPDLR  + + +V
Sbjct: 243 FLTAEEIQDITEGLIAKVMHDV-KGIDVKLPFDRITWQDAMDKYGSDKPDLRFDMQIQDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E    S+F+VF+   +V  G +V AI   GG    +R   D   ++ +  G  GLA   
Sbjct: 302 SELVKDSDFKVFAG--AVQNGGQVRAIVLPGGADKYSRKMIDAQQDYIKRFGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W    S +++  GP+AK     +   +   +    GD   F+A             R H 
Sbjct: 357 WLKVTSDSIS--GPIAKFFG--DGADLVKAVGANAGDLVLFVADKAKVVADALGYLRTHF 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +LG+I+   F FCW++D+P +E++E  ++   AH+PFTMP      L   D  +  A 
Sbjct: 413 GHDLGLIDEQAFRFCWVVDWPLFEYDEGIQRWVPAHHPFTMPNEEDVHLLDTDPHAAHAQ 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  +    +G + E  +  FG L  A   G PPHGG+A
Sbjct: 473 SYDIVLNGYELGGGSIRIHNREIQGKMLKALGFTPERAQKSFGFLLNALDYGFPPHGGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G  N+R+V  FP +    + +  +P  V+  QL++LG+ +
Sbjct: 533 IGLDRFVMLLTGRDNIRDVIAFPKNSKASEPMTSAPYPVADAQLKDLGIEV 583


>gi|331090642|ref|ZP_08339493.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330401082|gb|EGG80677.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 599

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 237/596 (39%), Positives = 351/596 (58%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           R+H C +L  S +G  V + GWV + R  GG++F+D+RD  GI QVV    +  S   E 
Sbjct: 10  RSHRCAELNSSHIGETVTVMGWVQKNRNKGGLVFVDVRDRSGIVQVVFEEGSVSSELIEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+RSE+V+ + G V  RS   +N NI+TG IE+   ++ +LS +E  P P+    +  
Sbjct: 70  AGSLRSEYVVAVVGKVAKRSG-AVNENIVTGDIEVLPTELRVLSESETPPFPIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R K R LDLRR  L +N++ R+++    R  +  E F+E  TP+L  S+PEGARD+L
Sbjct: 129 EEVRLKNRVLDLRRPDLQRNLIMRSQVATLTRQFLAEEGFLEIETPMLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QGSFYALPQ+PQ +KQLLM +G+DRYFQI  CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHQGSFYALPQSPQIFKQLLMCAGYDRYFQIVKCFRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L  VF+E  +   VS    R+ + +A+ R+G+DKPD+R  + + +
Sbjct: 248 SFVDVDDVIDVNERLLAKVFKEILDVE-VSLPIQRMTWQEAMDRFGSDKPDIRFGMELTD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V+E     EF VF   L    G  V  I AKG G   R   D++ ++A+  G  GLAYI 
Sbjct: 307 VSEVVKDCEFVVFKNAL--EQGGSVRGINAKGQGAMPRKKIDKLVDFAKGYGAKGLAYI- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +      AK +      A+   +  ++GD   F A           + R  I
Sbjct: 364 -AIQEDGTMK--SSFAKFMIEEEMTALVNAMGGENGDLLLFAADCNKVVWDVLGNLRLEI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +++ N ++F W+ +FP  EWNEE  +    H+PFTMP      L   +   ++A 
Sbjct: 421 ARQLELLDKNEYKFLWVTEFPLLEWNEEAGRYTAMHHPFTMPMEEDLHLIDTEPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R    ++  + F  +G +KE  + +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTELGGGSVRIFNQDIQNKMFEVLGFTKEQAQEQFGFLLNAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+    ++R+V  FP  ++  DL+  +P+ V  +QL ELGL IV   K
Sbjct: 541 YGLDRLIMLMAKQDSIRDVIAFPKVKDASDLMTEAPAGVDQKQLDELGLAIVAEEK 596


>gi|298369891|ref|ZP_06981207.1| aspartate--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281351|gb|EFI22840.1| aspartate--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 602

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 234/598 (39%), Positives = 352/598 (58%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFATAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFQDALGVDL--GDFPRMPYAEAMFYYGSDKPDMRISLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++  N++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVSNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKAKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++E+  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGAENSYFVDEWKPLWVVDFPMFEYDEDGDRWAAMHHPFTSPKPGHEDLMASD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PENCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELSLRL 592


>gi|261855094|ref|YP_003262377.1| aspartyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261835563|gb|ACX95330.1| aspartyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 596

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/590 (38%), Positives = 348/590 (58%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H+ G + ++ +   V L GWV+R R HGG+IF+D+RD  G+ Q+V +PD    F  A+
Sbjct: 4   RSHTAGQVDLAVLDQEVTLVGWVNRRRDHGGVIFVDLRDRDGMVQIVFDPDDLDVFAKAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE+V+ + G V  R A T N NI++GQIE+    +EIL+ +E LP  +  ER   E 
Sbjct: 64  SLRSEFVIRVRGKVRRRPAGTENPNIVSGQIEVLGLGLEILNRSEPLPFQLDDER-VSEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  +   +  R ++  ++R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 123 HRLRYRYLDLRRPEMLARLKLRHQVTRALREHLDNAGFMDVETPVLTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM +G +RY+QI  CFRDED R+DR P EF QLD+E SF
Sbjct: 183 SRTHPGEFFALPQSPQIFKQLLMVAGIERYYQIVKCFRDEDLRADRQP-EFTQLDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++++++  +E+++R +F + +    + N   R+ + +A+RR+G+DKPDLR P+ + +V 
Sbjct: 242 LDEEEVMALIEDMMRHLFAQ-TIELALPNPLPRLTWAEAMRRFGSDKPDLRIPLELVDVG 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +  V  +F+VFS   + +P   + A+    G    R+  D   ++    G  GLAYI   
Sbjct: 301 DLLVAVDFKVFSGPAN-DPRGRIAALRVPNGNSLPRSAIDDYTKFVSIYGAKGLAYIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+ K L     + I  R   Q GD  FF   D  K  + +  A R  I 
Sbjct: 360 DAAAGREGLQSPILKFLTDDAIDGIMTRTGAQTGDVVFF-GADKAKIVNESLGALRVRIG 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           Q++G++    F   W+ +FP +E++E+E +    H+PFT P      L   D  ++++  
Sbjct: 419 QDMGLVE-QGFRALWVTEFPMFEYDEKEGRYYALHHPFTAPNLDDLHLLETDPEAVRSRA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD V NGFE+  G +R H   +  + F  +GIS E    +FG L  A + G PP  G+A 
Sbjct: 478 YDFVLNGFELGGGSVRIHDQTMQKRVFELLGISAEQASEKFGFLLDALKFGAPPMAGLAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DRIVML+ GA ++REV  FP +Q+   LL  +P  V   QLREL +R+
Sbjct: 538 GVDRIVMLMSGATSIREVIAFPKTQSAACLLTNAPGEVDEAQLRELSIRV 587


>gi|116495009|ref|YP_806743.1| aspartyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|227534983|ref|ZP_03965032.1| aspartyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|239631396|ref|ZP_04674427.1| aspartyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301066572|ref|YP_003788595.1| aspartyl-tRNa synthetase [Lactobacillus casei str. Zhang]
 gi|122263574|sp|Q038S1|SYD_LACC3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116105159|gb|ABJ70301.1| aspartyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|227187374|gb|EEI67441.1| aspartyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|239525861|gb|EEQ64862.1| aspartyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300438979|gb|ADK18745.1| Aspartyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 601

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/591 (38%), Positives = 330/591 (55%), Gaps = 15/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT   GD+    V   V L GWV + R  G +IF+D+RD  GI Q+V +   D     +A
Sbjct: 4   RTCYAGDVTAEYVDQEVTLKGWVQKRRSLGSLIFIDLRDREGIVQLVFSEEFDKDALAVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVRSE+V+ + G+V  R  + +N ++ TG +E+    I IL+ A+  P  +       E
Sbjct: 64  NSVRSEYVIEVQGVVKKRKPQAVNKDMKTGDVEVEVHTITILNKAKTPPFYIEDGVAVTE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             + KYR+LDLRR  + KNI  R  I+ S+   +    FI+  TP LTAS+PEGARD+LV
Sbjct: 124 ETKLKYRYLDLRRPEMQKNIFTRAHIMRSVHHFLDDNGFIDVETPTLTASTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGSFYALPQSPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I +  E ++  V  +   G  V   F RI + DA+ +YG+DKPDLR  + + +V
Sbjct: 243 FLTAEEIQDITEGLIAKVMHDV-KGIDVKLPFDRITWQDAMDKYGSDKPDLRFDMQIQDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E    S+F+VF+   +V  G +V AI   GG    +R   D   ++ +  G  GLA   
Sbjct: 302 SELVKDSDFKVFAG--AVQNGGQVRAIVLPGGADKYSRKMIDAQQDYIKRFGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W    S  ++  GP+AK     +   +   +    GD   F+A             R H 
Sbjct: 357 WLKVTSDGIS--GPIAKFFG--DGADLVKAVGANAGDLVLFVADKAKVVADALGYLRTHF 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +LG+I+   F FCW++D+P +E++E  ++   AH+PFTMP      L   D  +  A 
Sbjct: 413 GHDLGLIDEQAFRFCWVVDWPLFEYDEGIQRWVPAHHPFTMPNEEDVHLLDTDPHAAHAQ 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  +    +G + E  +  FG L  A   G PPHGG+A
Sbjct: 473 SYDIVLNGYELGGGSIRIHNREIQEKMLKALGFTPERAQKSFGFLLNALDYGFPPHGGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR VMLL G  N+R+V  FP +    + +  +P  V+  QL++LG+ +
Sbjct: 533 IGLDRFVMLLTGRDNIRDVIAFPKNSKASEPMTSAPYPVADAQLKDLGIEV 583


>gi|163859168|ref|YP_001633466.1| aspartyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|229470547|sp|A9IHE2|SYD_BORPD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|163262896|emb|CAP45199.1| aspS [Bordetella petrii]
          Length = 595

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/594 (38%), Positives = 347/594 (58%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT   G++    +G  V L GWV+R R HGG+IF+D+RD  G+ Q+V +PD+A F  A+ 
Sbjct: 2   RTCYTGEVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRAGLAQIVFDPDNAAFATAER 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + GLV  R   T N  + +G++E+  +++EIL+ +   P  +  +    E+ 
Sbjct: 62  LRNEFCIRVTGLVRPRPEGTANPELASGEVEVLCKEVEILNASITPPFQL-DDDNLSETT 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  +R LDLRR  + +N++ R R+   +R  +    FI+  TP+LT S+PEGARD+LVPS
Sbjct: 121 RLTHRVLDLRRPQMQRNLMLRYRVSIEVRKFLDQLGFIDIETPMLTKSTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF+
Sbjct: 181 RVNAGHFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSFL 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            + +I    E+++R VF+   N   +   F ++ + +A++RYG+DKPDLR  +   +VT+
Sbjct: 240 NEVEIRQIFEDMIRHVFKTVQNVE-LPAPFPQMTWTEAMQRYGSDKPDLRVSLEFTDVTD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363
                +F+VF+   +  PG  V A+   GG   +R+  D   ++    G  GLAYI    
Sbjct: 299 VMRDVDFKVFAAAATA-PGSRVVALRVPGGAELSRSEIDAYTQFVGIYGAKGLAYIKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+      +  R   Q GD  FF A D  K  + A  A       
Sbjct: 358 ASKGREGLQSPIVKNLHDAALAELLKRSGAQSGDIIFFGA-DRAKIVNDAIGALRVKIGH 416

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   ++ G+ + + ++  W++DFP +E++EE+ +   AH+PFT P+ G E    +D    
Sbjct: 417 SEFGKKAGLASSD-WKPLWVVDFPMFEYDEEDGRYTAAHHPFTSPKDGHEDFLESDPSKA 475

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E    +FG L  A Q G PPHG
Sbjct: 476 FAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAREKFGFLLDALQYGAPPHG 535

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+
Sbjct: 536 GIAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSEVDEKQLRELHIRL 589


>gi|261366005|ref|ZP_05978888.1| aspartate--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288565412|gb|EFC86972.1| aspartate--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 602

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 234/598 (39%), Positives = 351/598 (58%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFATAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFQDALGVDL--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++  N++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVSNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKAKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++E+  +    H+PFT P+ G E L   D
Sbjct: 415 RIKVGLEHGAENGYFVDEWKPLWVVDFPMFEYDEDGDRWAAMHHPFTSPKPGHEDLMATD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PENCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELSLRL 592


>gi|313623669|gb|EFR93823.1| aspartyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 591

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/594 (39%), Positives = 341/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTSYCGELNETHIGQNVILHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGKVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I    E++L  V +E  N  T+   F R+ Y +A+ R+G+DKPD+R  + + NV
Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E     +F+VF    ++  G EV AI AK      +R   D +  +  + G  GLA   
Sbjct: 302 SEVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA--- 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W   E+G +   GP+AK         ++  L  +DGD   F A       +     RN +
Sbjct: 357 WLKVEAGELK--GPIAKFFPEDKAAELQAALQAEDGDLLLFAADKADIVAASLGALRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L +IN +   F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A 
Sbjct: 415 GKDLDLINEDELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAE 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA
Sbjct: 475 AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMEALEYGTPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+ 
Sbjct: 535 LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSAAQLAELKLETVKK 588


>gi|296160991|ref|ZP_06843802.1| aspartyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295888690|gb|EFG68497.1| aspartyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 599

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 239/600 (39%), Positives = 344/600 (57%), Gaps = 10/600 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F+ A+
Sbjct: 4   RSEYCGLVTEELLGQSVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L I G+V +R   T NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCLQIKGVVRARPEGTTNAALKSGKIEVLCHELIVLNPSITPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDAQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQIVKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+E + G T+   F  + Y +A+RR+G+DKPDLR  +   ++T
Sbjct: 242 LSEQEIRDLFEAMIRHVFKE-TIGVTLDEKFPVMLYSEAMRRFGSDKPDLRVKLEFTDLT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAVRDVDFKVFSTPANTKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422
              G      P+ K+L+    +AI  R   QDGD  FF A D  K  + +  A R  I  
Sbjct: 361 VAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            E G  N      ++  W++DFP +E++EE+ +   AH+PFT P+         D     
Sbjct: 420 SEFGKANGLVETGWKPLWVIDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCL 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R H  EV  + F  + I+ E  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           IA G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+ +   K+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSEVDERQLRELHIRLRQPEPKV 599


>gi|257790368|ref|YP_003180974.1| aspartyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|325833720|ref|ZP_08166135.1| aspartate--tRNA ligase [Eggerthella sp. HGA1]
 gi|257474265|gb|ACV54585.1| aspartyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|325485260|gb|EGC87730.1| aspartate--tRNA ligase [Eggerthella sp. HGA1]
          Length = 592

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/592 (38%), Positives = 346/592 (58%), Gaps = 16/592 (2%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIA 62
           T +CG+L   DVG  V L GW    R HGG+IF+D+RD  G TQVV +PD      F  A
Sbjct: 12  TATCGELRKGDVGREVVLCGWAWHNRDHGGLIFVDLRDRAGYTQVVVDPDCVSADDFAKA 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +  E+VL I G V  R AE +N N+ TG+IE+ A+ +E+L+ +   P  +    E  E
Sbjct: 72  EHLGREYVLKIAGTVRERGAEAVNPNMATGEIEVLAKSVEVLNTSVTPPFSIEDGIETDE 131

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + R K+R+LD+RR  +++ +  R ++  +MR  +    F+E  TPIL  S+PEGARD++V
Sbjct: 132 TTRMKWRYLDIRRPEMYQALHLRHKVAQAMRGALNERGFLEVETPILANSTPEGARDYIV 191

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR N G FYALPQ+PQQ+KQ+LM  G +RY+QIA CFRDED R+DR P EF Q+D+EM 
Sbjct: 192 PSRPNPGRFYALPQSPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQP-EFTQVDIEMG 250

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +D++N ME+V+       + G   +    R+ Y +++ R+G D+PD R  + + ++
Sbjct: 251 FVQGEDVMNLMEDVMAETLA--AVGVEHAFPLQRMQYRESMDRFGNDRPDTRFGMELVDI 308

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+   ++ F+VFS +     G  V AI AKG G  +R   +++ + A   G  G+A+I +
Sbjct: 309 TDIVKNTGFKVFSSV--AQSGGVVKAINAKGAGDWSRGDVEKLADIAAENGAKGMAWIAF 366

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
             D         P+ K  +     A++  +D++ GD   F A D  +  S    A R H+
Sbjct: 367 TTDGKEK----SPIIKFFSDEEFAALKEAMDVEPGDLLLF-AADTYEVASAVLSALRLHM 421

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A  L +      +  W+++FP ++++E+EKK    H+PFT           +D L+  ++
Sbjct: 422 ADALNVPR-EGHQLLWVVNFPMFKYDEDEKKYAAEHHPFTHVLDEDVDKIESDPLACGSY 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV +GFE+  G IR H ++         G++ E +E +FG L  A + G PPHGGIA
Sbjct: 481 SYDLVMDGFEVGGGTIRIHNADEQRAVLRTCGLTDEEIEEKFGHLIHALELGAPPHGGIA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL G  ++R+V  FP + +  D + G+PS V+  QL+E+ LR +
Sbjct: 541 LGLDRLVMLLGGKASIRDVIAFPKTSSASDPMTGAPSAVTGRQLKEVNLRTL 592


>gi|187918313|ref|YP_001883876.1| aspartyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|238689288|sp|B2S0F0|SYD_BORHD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119861161|gb|AAX16956.1| aspartyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 585

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/594 (37%), Positives = 339/594 (57%), Gaps = 12/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++T  C  +    V   + ++ WV ++R HG + F+++RD Y   QV+ + D    +I  
Sbjct: 2   FKTIRCNQINDKLVNQRIEINAWVKKIRHHGKVTFINLRDRYDEAQVLVS-DENLLKITS 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + + G +  R  E  N  + TG  E+ A+ I+I+S   ELP  +       ++
Sbjct: 61  QIKMEYCIKVQGTLELRPLELANKEMKTGAFEILAENIDIISRCNELPFMIEDNNNANDN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + +YR+LDLRR+   + I+ R+++ + +R  +  ++F+E  TP    S+PEGARDFLVP
Sbjct: 121 AKLEYRYLDLRREEQKQKIILRSKVTHIIRNYLTKKDFLELETPTFVKSTPEGARDFLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++G FYALPQ+PQ YKQL M +G D+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGHFYALPQSPQIYKQLTMVAGLDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++++I   MEN++  +F+   N   +   F ++ Y  A+  YG+DKPD R  +++ +++
Sbjct: 240 IKKENIFKLMENLMFTIFKNTLNI-ALPKKFKKMTYKHAMNTYGSDKPDTRYELLIQDMS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +HF  S F VF  +L      +   I  +    +R+  + + E A+     GL   F ++
Sbjct: 299 KHFKKSSFNVFQDMLQNKGTIKALIIKNQAHNFSRSKINNLEEHAKIYKARGL--YFAKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           +   N    G +AK LN +    I     + + D  FFIA      C      R  IA E
Sbjct: 357 E---NNEFSGGIAKFLNEIKQTLIEA-YSLANNDIIFFIADSWETACKAMGQVRIKIATE 412

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQY 482
           L +IN N FEF WI DFP +E++E+ K    AH+ F++P Q  + +L+ N    +    Y
Sbjct: 413 LNLINKNIFEFLWIYDFPLFEYDEDTKSYQAAHHMFSLPKQKYIHTLESNP-SKVLGEVY 471

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+ SG IR H  E+  + F+ VG   E+ E RFG   +A + G P HGGIA G
Sbjct: 472 DLVLNGMELGSGSIRVHTRELQQRIFNIVGFKNEIAEERFGFFLKALEYGAPIHGGIAIG 531

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IDR++ML+  + ++++V LFP +      L  SPS +S EQLREL L I EN K
Sbjct: 532 IDRLLMLMTHSSSIKDVILFPKNSFAASPLDKSPSRISNEQLRELNLTI-ENYK 584


>gi|254443149|ref|ZP_05056625.1| aspartyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198257457|gb|EDY81765.1| aspartyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 600

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/594 (38%), Positives = 349/594 (58%), Gaps = 18/594 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTH CG L   DVG  V L GWV  +R HGGI+F+D+RD  G+TQV ANP  D A F  A
Sbjct: 3   RTHHCGQLRSGDVGKSVALIGWVDSIRDHGGILFIDLRDREGLTQVKANPNSDDANFNAA 62

Query: 63  -KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--E 119
             S++ E V+   G V +R+  T+N  + TG+IE+ A  + + +++E  P P+  ++  +
Sbjct: 63  INSLKPESVVEFHGEVEARADGTVNPKMPTGEIEVQALTVVVHNISETPPFPIDDDKGDK 122

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LDLRR  ++K +  R     S+R  M    F++  TPIL  S+PEGAR+
Sbjct: 123 VNEDMRLRYRYLDLRRSKMNKVVRLRHATSRSIRDYMDENAFVDVETPILFKSTPEGARE 182

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+N G FYALPQ+PQQ+KQ+LM +G +RY+QIA CFRDED R+DR   EF QLD+
Sbjct: 183 YLVPSRINPGEFYALPQSPQQFKQMLMVAGVERYYQIARCFRDEDLRADR-QMEFTQLDI 241

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E+SF++++D+ + +E +++ ++++  + + +   F R+ ++DA+ RYG DKPD R  + +
Sbjct: 242 ELSFIDREDMYSLIEGLMKKIWKDVLDVD-LPTPFPRMSFEDAMNRYGVDKPDTRFGLEI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            + +E F +S F+VF   ++     + +  P       +     + E A+S G  GLA+I
Sbjct: 301 QDFSEAFANSSFKVFQATVAKGGVVKAFKAPTL-ADVTQGEMKNLEEVAKSLGAKGLAFI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G      P+ K  +     A+  RL++ +GD  FF A +  + C+     R  
Sbjct: 360 --KVGEGGEWK--SPIVKFFSEEEKAALSERLELAEGDIVFFAASEWEQACAILGRTRLE 415

Query: 420 IAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
            A+ L       I  + F+F W+++FP   ++EE       H+PFT P          D 
Sbjct: 416 CAELLKKRGRLEIPKDQFDFLWVIEFPLMSFDEERGGYAATHHPFTAPVAEDVQYLDTDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLYRAFQCGM 533
             ++   YDLV NG E+  G IR H + V  + F +V  I  +VV+ RFG +  AF+ G 
Sbjct: 476 KRVRGQHYDLVLNGVELGGGSIRIHQAAVQKKIFEDVLNIPADVVQERFGYMLEAFKYGA 535

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           PPHGGIA G+DR+VM+L G  ++R+V  FP +Q    L+  SP+ V+ +QL++L
Sbjct: 536 PPHGGIAFGLDRLVMILAGLSSIRDVIAFPKTQKGQCLMTDSPTPVTAKQLKDL 589


>gi|304440199|ref|ZP_07400089.1| aspartate--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371248|gb|EFM24864.1| aspartate--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 591

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 232/594 (39%), Positives = 352/594 (59%), Gaps = 17/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62
           RT   GDL   D+   V L GWV + R  G + F+D+RD  GI Q+V N  PD   FE +
Sbjct: 9   RTDYAGDLREKDIDREVVLMGWVAKERNLGSLNFVDLRDRSGICQIVFNDKPDEELFEKS 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +RSE+V+ + G V  RS  ++N NI TG IE+ A +++IL++++  P+ V  +    E
Sbjct: 69  KKLRSEFVIGVKGKVRKRS--SVNENIPTGYIEVLADELKILNISDVPPIYVKDDDNVSE 126

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R K R LDLR+ ++  N++ R++     R       FIE  TP+LT  +PEGARD+LV
Sbjct: 127 NMRLKNRSLDLRKPSMINNLMVRSKFYKVTRDFFAENGFIEVETPMLTKPTPEGARDYLV 186

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ  KQLLM SG DRY QI  CFRDED R++R P EF Q+D+EMS
Sbjct: 187 PSRVNPGKFYALPQSPQLLKQLLMVSGLDRYIQITKCFRDEDLRANRQP-EFTQIDLEMS 245

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +D+L+  E  L+  F+E  + + +     R+ Y +A+ RYG DKPDLR  + + N+
Sbjct: 246 FVDVEDVLDINEKFLKVAFKEMLDID-IELPIKRMKYKEAMERYGIDKPDLRFGMEIQNI 304

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           T+      F VF +  S      V  I  KGG    +R    ++ ++ +  G  GL  I 
Sbjct: 305 TDIVKDCGFGVFEQ--SAKEFNSVRGINVKGGAKAYSRKGISKLEDFVKDFGAKGLVNI- 361

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            +++E  ++ G   + K L     + I+   + ++GD    ++G D + F S   + RN 
Sbjct: 362 -KIEEGKSITG---IDKFLKEGILDKIKKAFNAEEGDLILIVSGKDKVVFDSL-GNLRNK 416

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+++ +I+ + FE  WI +FP +E++EEE +    H+PFT P         +D  + +A
Sbjct: 417 VARDMNLIDDSKFELVWITEFPLFEYSEEENRYVAVHHPFTAPMDEDLDKVESDPANARA 476

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR +  E+  + F  +G ++E  EN+FG L  AF+ G PPHGG+
Sbjct: 477 KAYDIVINGDEMGGGSIRINDREIQKKMFKALGFTEEDAENKFGFLLEAFKYGAPPHGGL 536

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DR+VML   + N+R+V  FP +Q+   LL G+P+ +S EQLRE+ ++ ++
Sbjct: 537 AYGLDRLVMLFTNSSNIRDVIAFPKTQSASCLLTGAPTELSEEQLREVHIKPIK 590


>gi|150008039|ref|YP_001302782.1| aspartyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|256840784|ref|ZP_05546292.1| aspartyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|298376609|ref|ZP_06986564.1| aspartate--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|301309864|ref|ZP_07215803.1| aspartate--tRNA ligase [Bacteroides sp. 20_3]
 gi|166225371|sp|A6LBU6|SYD_PARD8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|149936463|gb|ABR43160.1| aspartyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|256738056|gb|EEU51382.1| aspartyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|298266487|gb|EFI08145.1| aspartate--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|300831438|gb|EFK62069.1| aspartate--tRNA ligase [Bacteroides sp. 20_3]
          Length = 585

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/590 (38%), Positives = 342/590 (57%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT +CGDL ++D G  V L+GWV + R  GG+ F+DIRD YGITQ+V N   D+A  E 
Sbjct: 2   YRTRTCGDLRLADEGLVVTLAGWVQKTRKMGGMTFVDIRDRYGITQLVFNQEVDAALCEK 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  RS++  NA+I TG IEL   ++ +L+ A   P  +  E +  
Sbjct: 62  ANKLGREFVIQVTGTVRERSSK--NAHIPTGDIELIVSELNVLNTALTPPFTIEEETDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  + KN+  R R+   +R  +  + F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRACVRKNLELRHRMAFEVRRYLDEQGFLEVETPVLVNSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D+LN  E + + +F+    G     +F+R+ + DA+++YG+DKPDLR  +    
Sbjct: 239 SFVEQEDVLNMFEGMAKHLFKVI-RGVEFKESFMRMTWQDAMKQYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-IGGICAEGAASYTRKQLDALTEFVKRPQVGAKGLVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  GNV     V K  +    + ++     + GD    ++G D +K      + R  
Sbjct: 352 ARVEADGNVK--SSVDKFYSQEVLQEMKNAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + + F   W++DFP +EWNE++++    H+PFT P      L   D  +++A
Sbjct: 410 MGNQLGLRDKDKFVCLWVIDFPLFEWNEDDQRFYAMHHPFTSPNPDDIPLLDTDPGAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++  + F  +G ++E  + +FG L  AF+ G PPHGG+
Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSQLQDKMFKLLGFTEERAQEQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L  G  ++R+   FP + +  D+++ +P  +   QL EL L
Sbjct: 530 AYGLDRFVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGVLDPAQLDELNL 579


>gi|255013259|ref|ZP_05285385.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 585

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/590 (38%), Positives = 342/590 (57%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT +CGDL ++D G  V L+GWV + R  GG+ F+DIRD YGITQ+V N   D+A  E 
Sbjct: 2   YRTRTCGDLRLADEGLVVTLAGWVQKTRKMGGMTFVDIRDRYGITQLVFNQEVDAALCEK 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  RS++  NA+I TG IEL   ++ +L+ A   P  +  E +  
Sbjct: 62  ANKLGREFVIQVTGTVRERSSK--NAHIPTGDIELIVSELNVLNTALTPPFTIEEETDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  + KN+  R R+   +R  +  + F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRACVRKNLELRHRMAFEVRRYLDEQGFLEVETPVLVNSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D+LN  E + + +F+    G     +F+R+ + DA+++YG+DKPDLR  +    
Sbjct: 239 SFVEQEDVLNMFEGMAKHLFKVI-RGVEFKESFMRMTWQDAMKQYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-IGGICAEGAASYTRKQLDALTEFVKRPQVGAKGLVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419
            R++  GNV     V K  +    + ++     + GD    ++GD  +K      + R  
Sbjct: 352 ARVEADGNVK--SSVDKFYSQEVLQEMKNAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + + F   W++DFP +EWNE++++    H+PFT P      L   D  +++A
Sbjct: 410 MGNQLGLRDKDKFVCLWVIDFPLFEWNEDDQRFYAMHHPFTSPNPDDIPLLDTDPGAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++  + F  +G ++E  + +FG L  AF+ G PPHGG+
Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSQLQDKMFKLLGFTEERAQEQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L  G  ++R+   FP + +  D+++ +P  +   QL EL L
Sbjct: 530 AYGLDRFVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGVLDPAQLDELNL 579


>gi|282877970|ref|ZP_06286779.1| aspartate--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299971|gb|EFA92331.1| aspartate--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 586

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 232/599 (38%), Positives = 348/599 (58%), Gaps = 29/599 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEI 61
           YRT++CG+L +SD G  V LSGWV R R  GG+ F+D+RD YGITQ+V N   D++  E 
Sbjct: 2   YRTNTCGELRLSDEGKEVILSGWVQRTRKMGGMTFVDVRDRYGITQLVFNEATDASLCEQ 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+  CI  +      ++ N  + TG IE+   ++ +LS +   P  +  E +  
Sbjct: 62  ANKLGREF--CIQAIGKVSERQSKNDKLPTGDIEILVSQLNVLSESLTPPFKIEDETDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR T+ KN+  R R+   +R  +  E FIE  TPIL  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRPTVRKNLELRHRMTILIRNFLDNEQFIEVETPILIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD+++  EN+ R +F+E   G  +     ++ + +A+RR+G+DKPDLR  +    
Sbjct: 239 SFVDQDDVIDLFENLCRHLFKEI-RGVELPEKLQQMTWHEAMRRFGSDKPDLRFGMEFVE 297

Query: 302 VTEHFV-HSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357
           + + F   ++F VF      N    +  I   G    +R   D ++++ +    G  GL 
Sbjct: 298 LLDAFKGKADFSVF------NEASYIGGICVPGCASYSRKQLDELSDFVKRPQVGAKGLV 351

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-----PLKFCSF 412
           YI +  D  G +     V K  +      ++ R+  +DGD    ++GD      ++ C+ 
Sbjct: 352 YIKYNAD--GTIK--SSVDKFYSKEQLLEVKERMGAKDGDLVLILSGDNANKTRVQLCTL 407

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               R  + + LG+ + N FE  WI+DFP +EW++EE+++   H+PFTMP      L   
Sbjct: 408 ----RLEMGERLGLRDKNKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDE 463

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
               ++A  YD VCNG E+  G +R H  ++  + F  +G + E    +FG L  AF+ G
Sbjct: 464 HPERVRAKAYDFVCNGIEVGGGSLRIHDGQLQQKMFEILGFTPEKAMAQFGFLINAFKYG 523

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            PPH G+A G+DR V ++ G  ++R+   FP + N  D+++ +PST+  +QL EL +++
Sbjct: 524 APPHAGLAFGLDRFVSIMAGLDSIRDCIAFPKNNNGRDVMLDAPSTIDQKQLDELEIKL 582


>gi|210623813|ref|ZP_03294062.1| hypothetical protein CLOHIR_02013 [Clostridium hiranonis DSM 13275]
 gi|210153308|gb|EEA84314.1| hypothetical protein CLOHIR_02013 [Clostridium hiranonis DSM 13275]
          Length = 604

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/594 (38%), Positives = 349/594 (58%), Gaps = 18/594 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           R+  CG+L   ++G  V L GWV + R  GG++F+D+RD  GI Q+V   + D   FE A
Sbjct: 16  RSCYCGELRAENIGQEVVLMGWVQKKRNLGGLVFVDLRDRGGICQIVFDTDVDKEAFEKA 75

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + SE+V+ + G V  R ++  N N+ TG +E+ A ++ +L+ +E  P+ +  + +  E
Sbjct: 76  EKLGSEYVIAVKGEVRERQSK--NPNMPTGDVEVFANELRLLNKSETPPIYIKDDDDVSE 133

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLR+  + +N++ R ++ N +R  +  +NF E  TP L   +PEGARD+LV
Sbjct: 134 ALRLKYRYLDLRKPKMQRNLMLRQQVTNIVRRYLTEQNFCEIETPFLVKPTPEGARDYLV 193

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN+G FYALPQ+PQ  KQLLM SG DRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 194 PSRVNEGKFYALPQSPQLLKQLLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDTEMS 252

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE +D++  ME +++ +F+E  N + +     R+ Y +A+ RYG+DKPD R      N+
Sbjct: 253 FVEAEDVMTIMEKMVQEIFKETINVD-IELPLPRMTYAEAMDRYGSDKPDTRFGYEFVNI 311

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           T+      F+VF+       G  V  I  +G      R     + + A++    GLA++ 
Sbjct: 312 TDLVEGCGFKVFAD--CAEKGKSVRGINVEGMAEKFPRKQISHLEDCAKTYKAKGLAWM- 368

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ E G  +   P+AK  +  +  AI  R++ + GD   F+A             R  +
Sbjct: 369 -KITEEGVTS---PIAKFFSEEDLNAIVERMNGKVGDLLLFVADKDAIVYDALGQVRLAV 424

Query: 421 AQELGII--NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSI 477
           A++LGI+    N F F W+ +FP +E +EE  +    H+PFT P    ++ L  ++  ++
Sbjct: 425 AEKLGILEEKKNQFNFLWVTEFPLFEEDEENGRYVAKHHPFTSPLDEDIDRLDTDEKDTL 484

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R   SEV  + F+ +G+S+E   N+FG L  AF+ G PPH 
Sbjct: 485 RAKAYDIVLNGYEVGGGSVRISDSEVQKKMFAALGLSEEEAYNKFGFLLDAFKYGAPPHA 544

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR+VMLL G  N+REV  FP +QN    +  +P+     QL EL +++
Sbjct: 545 GMAFGLDRLVMLLAGVDNIREVIAFPKNQNAICPMTNAPAPAEDAQLEELSIKV 598


>gi|317048524|ref|YP_004116172.1| aspartyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316950141|gb|ADU69616.1| aspartyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 593

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 239/597 (40%), Positives = 350/597 (58%), Gaps = 15/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F++A 
Sbjct: 2   RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQEAFQLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N+++ TG+IE+ A ++ I++ AE  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARDEKNKNSDMATGEIEIFAHELNIINRAE--PLPLDSNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDGEGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++R ++ +    +    NF ++ + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREVMERLIRELWLDIKGVDL--GNFPQMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + EF+VFS   +   G  V A+   GG   +R   D   ++    G  GLA++   
Sbjct: 297 DLLKNVEFQVFSGPANDAKG-RVAALRVPGGATLSRKQIDEYGKFVEIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK LN     AI  R   QDGD  FF A D  K  S A  A R  + 
Sbjct: 356 ELAKGFDGVQSPVAKFLNAEIVAAILERTGAQDGDVIFFGA-DRAKVVSDALGALRLKVG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480
           ++L I N   +   W++DFP +E  ++E  +   H+PFT P+    S L  N   +I A 
Sbjct: 415 RDLQITNDKAWAPLWVIDFPMFE-ADDEGGLAAMHHPFTSPKEMTASELAANPEQAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H   +    FS +GI+++    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHNGNMQQAVFSILGIAEDEQREKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+ MLL G  N+R+V  FP +     L+  +PS  +   L +LG+++   PKK
Sbjct: 533 FGLDRVTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSEANPAALADLGIQLA--PKK 587


>gi|237747323|ref|ZP_04577803.1| aspartyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378674|gb|EEO28765.1| aspartyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 605

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 237/598 (39%), Positives = 347/598 (58%), Gaps = 16/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG    + +G  V L GWVHR R HGGIIF+D+RD  G+ Q+V +PD    F+IA+
Sbjct: 4   RTNYCGLTTEALLGQTVTLCGWVHRRRDHGGIIFIDMRDREGLVQIVCDPDRPDVFKIAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+ L + G V +R   T+N N+ +G IE+  + +E+L+ +   P  +  E    E+
Sbjct: 64  SIRNEYCLRVTGTVRARPEGTVNENLTSGHIEVFCETLEVLNPSVTPPFQLDDE-HLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  + A  FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQNNLRLRYKVAMEVRKYLDANGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D EMSF
Sbjct: 183 SRVNPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCEMSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ ++ +  EN++R +F    N   +   F  + ++ A+ RYG+DKPDLR  +    +T
Sbjct: 242 VEEQEVRDLFENMIREIFANTMN-TELPKPFPVMTHEMAMARYGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAI-----PAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +   +  F+VFS   ++ PG  V A+      A+G G  R+  D   ++    G  GLAY
Sbjct: 301 DVMKNVPFKVFSNAANM-PGGRVAALLVPGGSAEGSGMPRSEIDAYTQFVGIYGAKGLAY 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
           I       G      P+ K+L       I  R   ++GD  FF A D  +  + A  A R
Sbjct: 360 IRVNDISKGAAGLQSPIVKNLTDEAIRQILERTGAKNGDLIFFGA-DKARIVNDALGALR 418

Query: 418 NHIA-QELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           N I   + G  +      ++  W++DFP +E++E + +    H+PFT P+ G E    +D
Sbjct: 419 NKIGYSDFGHAHGLFEESWKPLWVIDFPMFEYDEGDNRWVACHHPFTSPKDGHEDYLESD 478

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
               +A  YD+V NG+E+  G IR H  EV  + F  + I       +FG L  A Q G 
Sbjct: 479 PGRCRAKAYDMVLNGWELGGGSIRIHKEEVQSKVFRALKIGDGEAREKFGFLLDALQYGA 538

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ G+ ++R+V  FP +Q    LL  +PSTVS +QL+EL +R+
Sbjct: 539 PPHGGLAFGLDRLVTLMTGSDSIRDVIAFPKTQRAQCLLTHAPSTVSEKQLQELHIRL 596


>gi|319944729|ref|ZP_08018993.1| aspartate--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319741978|gb|EFV94401.1| aspartate--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 609

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 234/599 (39%), Positives = 353/599 (58%), Gaps = 15/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+   G+L  + +   V L GWVHR R HGG+IF+D+RD  G+ Q+V +PD A  F  A+
Sbjct: 3   RSCYVGELSEAFLDQEVTLMGWVHRRRDHGGVIFIDLRDREGLAQIVCDPDRAETFRTAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+ + I G V  R   T+N  I +GQ+E+   ++E+L+ +   P  +  +    E+
Sbjct: 63  SLRNEYCIRITGKVRRRPEGTVNDGIRSGQVEVLCHELEVLNPSVTPPF-LLDDENLSEN 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  YR LDLRR  + KN++ R R+  ++R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 122 TRLTYRVLDLRRPAMQKNLMLRHRVTMAVRRYLDDLGFVDVETPMLTRSTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 182 SRVHDGYFYALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    E ++R +F++  N + + + F  + + +A+R YG+DKPDLR  +    +T
Sbjct: 241 LSEEEIRGIFEPMIRTIFKQVMNVD-LPDPFPTMSFAEAMRLYGSDKPDLRVKLQFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  V A+   GG   +R+  D   ++    G  GLA+I   
Sbjct: 300 DVMKTVDFKVFSGPANAKDG-RVVALRVPGGASISRSEIDAYTQFVGIYGAKGLAWIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416
             ++G      P+ K+L+     AI  R   QDGD  FF A D  K  + A  A      
Sbjct: 359 DVKAGREGLQSPIVKNLHDEAIAAILERTGAQDGDIIFFGA-DRAKVVNDAIGALRVKIG 417

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +   +  G+     ++  W++DFP +E++E+EK+    H+PFT P+ G E L  +D  +
Sbjct: 418 HSEFGKGHGLFEAG-WQPLWVLDFPMFEYDEDEKRWVALHHPFTSPKDGHEDLLESDPGA 476

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YDLV NG+E+  G +R H  +V  + F  + I  E  E +FG L  + + G PPH
Sbjct: 477 CIAKAYDLVLNGWEMGGGSVRIHRDDVQSKVFRALAIGPEEAEAKFGFLLSSLRYGAPPH 536

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A G+DR+V L+ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+  NP
Sbjct: 537 GGLAFGLDRMVTLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL-RNP 594


>gi|282855649|ref|ZP_06264960.1| aspartate--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282586497|gb|EFB91754.1| aspartate--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 602

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/591 (38%), Positives = 333/591 (56%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG +G   VG  + L+GWV   R HGG+IF+++ D  G  QVV  P  D      A
Sbjct: 12  RTVKCGLVGEELVGKEIVLNGWVRNRRDHGGVIFIELWDKSGSVQVVFTPEVDVKMHADA 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
             +RSE+V+ + G +  R    IN ++ TG+ E+ A+   +LS A ++P  +  E E   
Sbjct: 72  GDLRSEYVIAVKGTMRVRPDGMINPHMATGRWEMVARDFLLLSAAAQIPFEIGDETESVD 131

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R  YR+LDLRR+ +  N+  R  +    R  +   +F E  TPIL  S+PEGARD+L
Sbjct: 132 ENLRLTYRYLDLRRERMQNNLRTRHEVAQYTRAYLNGRDFTEVETPILMKSTPEGARDYL 191

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  GSFYALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 192 VPSRVTPGSFYALPQSPQLFKQILMISGMDRYYQIAKCFRDEDLRADRQP-EFTQVDLEM 250

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV ++D+   +E  + G++++   G  ++  F R+ Y +A+RR+G+DKPDLR P  +H+
Sbjct: 251 SFVTEEDVYELLEGYVVGLWKKIL-GVEITAPFRRLGYREAMRRFGSDKPDLRIPFEIHD 309

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V+  F    F  F  +L+        A+P  G   +R  C+ +    +  G P +A  F+
Sbjct: 310 VSAAFEGCGFAPFRSLLAGGGVIRTIAVPG-GAAWSRKQCEDVAAAGKKLGAPDVA--FF 366

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           ++ E       GP+AK+L+  +          QDGD+ F IA  D +   +     R  +
Sbjct: 367 QIKEG---VLKGPLAKYLDDEHKAQFLEMAQAQDGDAVFLIANVDAMLVATVLGQLRLDV 423

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G++    +EF W+ +FP  EW+ +E +    H+PFT P         +D     + 
Sbjct: 424 AKAHGLVR-EGWEFLWVTNFPLLEWSPDENRWVATHHPFTQPNPEDLPYLESDPARCGSR 482

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H  EV  + F  +  + E  ++RFG    A + G PPHGG+A
Sbjct: 483 TYDLVLNGIEVGGGSIRIHDEEVQEKVFKCLAFTPEEAQSRFGFFLDALKYGTPPHGGLA 542

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G DR+ MLL G K +REV  FP +    DL+ G+PS V   QL ELG+ +
Sbjct: 543 IGFDRLCMLLCGCKGIREVMAFPKTAKAQDLMAGAPSPVEALQLDELGISV 593


>gi|325684224|gb|EGD26400.1| aspartate--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 614

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/598 (37%), Positives = 348/598 (58%), Gaps = 17/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +   V L GWV RVR  G +IF+D+RD  GI QVV N DS     ++A
Sbjct: 7   RTDYCGNITSQYLDQDVLLYGWVQRVRNLGQLIFIDLRDREGIVQVVVNHDSGQELMDVA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+  E+V+ + G V  RS++  N ++ TG +E+ A +I +L+ A+  P  +  +    E
Sbjct: 67  SSLGQEYVVEVKGHVNERSSK--NPDMKTGDVEVIASEITVLNKAKTPPFEIKDDLVASE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR TL   ++ R +I+ +    +  E FI   TP L  S+PEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPTLQNALIMRAQIMTATNAYLSGEGFINIETPDLGKSTPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA CFRDED R DR P EF Q+D+E S
Sbjct: 185 PSRVYPGSFYALPQSPQIFKQLLMGAGFDKYYQIARCFRDEDLRGDRQP-EFTQIDLETS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++ +    E +L  V ++   G  +     RI + +++ +YG DKPD R  +++H++
Sbjct: 244 FMDEEGVQEVTEGLLAKVMKDV-KGIDLQLPLPRITWQESMDKYGCDKPDTRYEMLIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
              F  S F+VF+  L  N G+ V  I  KGG    +R   + M ++ +     GLA++ 
Sbjct: 303 GNVFAKSGFKVFASALE-NGGF-VRGIAVKGGAKFYSRKKIEAMQDYIKRYHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E G+ +  GPV++ L+      +     ++ G+   FIA D  K C  + D  R  
Sbjct: 361 Y---EDGDFS--GPVSRFLSEEEKAGLVQEFSLEGGELLLFIA-DQWKVCCDSLDYLRRQ 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GII  + +++ W++D+P +E++E +++   AH+PFTMP      L   D     A
Sbjct: 415 TAKETGIIPKDTYKYLWVVDWPLFEYDEGDERWIAAHHPFTMPDDKGIELLETDPHKAHA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  ++  + F  +G +KE    +FG L  A   G PPH G+
Sbjct: 475 RSYDIVLNGYELGGGSIRIHKRDIQEKMFKALGFTKERAYEQFGFLMDALDMGFPPHAGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR  MLL G  N+R+V  FP + +  + +M +P+ V+ +QL +LG+++ E  K+
Sbjct: 535 AIGLDRFAMLLAGKDNIRDVIAFPKNASASEPMMHAPAPVADQQLTDLGIKVAEAAKE 592


>gi|298206975|ref|YP_003715154.1| aspartyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849609|gb|EAP87477.1| aspartyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 582

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/592 (38%), Positives = 340/592 (57%), Gaps = 17/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61
           YR+HSCG+L    +G+ V LSGWV +VR  G ++++D+RD YGITQ+V + +    EI  
Sbjct: 2   YRSHSCGELNSDHIGNQVTLSGWVQKVRDKGFVVWVDLRDRYGITQLVFDEERTSLEILN 61

Query: 62  -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +  E+V+   G V+ R  E+ N NI TG IE+  +++ +L+ A+  P  +  + + 
Sbjct: 62  RAQELGREFVIQAKGKVIER--ESKNKNIPTGDIEVLVEELTVLNAAKTPPFTIEDDTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR  + +N++ R ++  ++R  +    FIE  TP L  S+PEGARDF
Sbjct: 120 GEDLRMKYRYLDIRRTPVRENLIFRHKVTIAVRNYLSDLGFIETETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F++Q+DILNT E +   + +E   G  V+  F R+ YDDA++RYG DKPD+R  +   
Sbjct: 239 MAFIDQEDILNTFEGLTTHLLKELK-GVEVT-EFPRMTYDDAMKRYGNDKPDIRFGMEFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
            + E   H +F VF      N    V  I   G     R   D +  W +      L  +
Sbjct: 297 ELNEVAQHKDFGVF------NSAELVVGIAVPGAASYTRKEIDALVNWVKRPQVGALGMV 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + + +E G+      V K  +  +          + GD    ++GD  K  +  +  R  
Sbjct: 351 YVKCNEDGSYK--SSVDKFYDQEDLAKWAEVTGAKPGDLICVLSGDTHKVRTQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ L +   + F   W++DFP  EW+E+ K+    H+PFT P+ G   L   +   +KA
Sbjct: 409 MAERLELRKSDEFAPLWVIDFPLLEWDEDTKRYHAMHHPFTSPKPGQLELLETNPGEVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H S+     F  +G + E  + +FG L  AFQ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDSKTQALMFDYLGFTPEEAKAQFGFLMDAFQYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+V +L G + +R+   FP +    D+++ +P+ +  EQL+EL L++
Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNAGRDVMIDAPAKIDEEQLKELHLKL 580


>gi|88801547|ref|ZP_01117075.1| aspartyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88782205|gb|EAR13382.1| aspartyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 584

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 337/592 (56%), Gaps = 17/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60
           YR+HSCGDL  S + + V L+GWV + R  G ++++D+RD YGITQ++   A       E
Sbjct: 2   YRSHSCGDLRTSHINTEVTLAGWVQKSRDKGFMVWVDLRDRYGITQLIFDTARTPIEMME 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AKS+  E+V+ + G V+ R  E+ N+ + TG +EL   K+EIL+ +   P  +  + + 
Sbjct: 62  KAKSLGREFVIQVTGTVIER--ESKNSKMATGDVELLVSKLEILNASITPPFTIEDKTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LD+RR+ + ++++ R ++   +R  +  + FIE  TP L  S+PEGARDF
Sbjct: 120 GEDIRMKYRYLDIRRNPVKESLIFRHKVAMEVRKYLSDQEFIEVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DIL   E + R + +E +N       F R+ YDDA+R YG DKPD+R  +   
Sbjct: 239 MAFVEQEDILKVFEGLTRHLLKEVNNVEVA--EFPRMLYDDAMRLYGNDKPDIRFGMEFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
            +     H EF VF      N    V  I   GG    R   D++ EW +      L  I
Sbjct: 297 ELNTVTQHKEFSVF------NTAELVVGIAVPGGNSYTRKEIDKLIEWVKRPQVGALGMI 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R++E G+      V K  +  +          + GD    ++GD  K  +  +  R  
Sbjct: 351 YCRVNEDGSFK--SSVDKFYDQEDFAKWAEITGAKSGDLICMLSGDIRKVRAQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A  LG+ +   F   W++DFP  E +EE       H+PFT P+ G   L   D  ++KA
Sbjct: 409 LAVRLGLRDSKVFAPLWVVDFPLLELDEETGHYHAMHHPFTSPKPGQMELLDTDPGAVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H  ++      ++G S    + +FG L  AF+ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKQMQATMLRHLGFSDADAKAQFGFLMDAFEYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+V +L G + +R+   FP + +  D+++ +P+ ++  QL+EL L++
Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAFIADTQLKELSLKL 580


>gi|124026867|ref|YP_001015982.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|123961935|gb|ABM76718.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 612

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 240/607 (39%), Positives = 353/607 (58%), Gaps = 36/607 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R  +CG+L  S + + V+L GWV R R HGG+IF+D+RD  G  Q+  +PD     F IA
Sbjct: 8   RNKTCGELRASAISANVQLCGWVDRRRDHGGVIFIDLRDRSGTIQITVDPDQGQDLFSIA 67

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119
           +S+R+E VL I+GLV +R  E IN  I TG++E+ A+ I+IL +V   LP  V    E  
Sbjct: 68  ESLRNETVLQINGLVRARPDEAINTKIPTGEVEVLAKNIKILNTVTSTLPFSVSIHDEES 127

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR ++R+LDLRR+ ++ N+  R   + + R  +  E FIE  TPILT S+PEGARD
Sbjct: 128 VKEEIRLRHRYLDLRRERMNNNLRLRHNTVKAARSFLENEGFIEVETPILTRSTPEGARD 187

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV  G F+ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 188 YLVPSRVCGGEFFALPQSPQLFKQLLMVGGVERYYQVARCFRDEDLRADRQP-EFTQLDI 246

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+E+ +I+   E ++  ++++   G  +   F R+ + +++ R+GTD+PD R  + +
Sbjct: 247 EMSFMEEKEIIELNEKLIVSIWKKIK-GIDLQTPFPRMTWQESMDRFGTDRPDTRYGMEL 305

Query: 300 HNVTEHFVHSEFRVFS---------KILSVNPGYEVWA-IPAKGGGGNRAFCDRMNEWAR 349
            N ++ F  S F+VFS         K +++  G  + + +  K GG      D  +E A+
Sbjct: 306 VNTSDLFSKSGFKVFSNAISSGGCVKCITIEDGNNLISNVRIKPGG------DIFSE-AQ 358

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
             G  GLA+I  R D+   V  +G +  +L     + + ++   + GD   F AG P   
Sbjct: 359 KAGAGGLAFIRVRDDQE--VDTIGAIKDNLTTSQIKELLLKTQAKPGDLILFGAG-PTNI 415

Query: 410 CSFAAD-ARNHIAQELGIINCNCFE----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ- 463
            +   D  R  IA++L II+ N  +    F W+ DFP +E+N +E +++  H+PF  P+ 
Sbjct: 416 VNRTLDRVRQFIAKDLKIISDNELKTQWNFLWVTDFPMFEFNSDENRLEAIHHPFCAPKP 475

Query: 464 ---GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
              G  ESL  + L +  A  YDLV NG EI  G +R H SE+       +G+SK   E 
Sbjct: 476 EDIGESESLWKDKLPNSNAQAYDLVLNGLEIGGGSLRIHNSELQKTVLEVIGLSKNEAEE 535

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
           +FG L  A   G PPHGGIA G+DRIVMLL    ++R+   FP +Q     +  +P+ V 
Sbjct: 536 QFGFLIDALAMGAPPHGGIAFGLDRIVMLLANEDSIRDTIAFPKTQQARCSMAKAPANVE 595

Query: 581 VEQLREL 587
            +QL +L
Sbjct: 596 NKQLEDL 602


>gi|312132334|ref|YP_003999673.1| asps [Bifidobacterium longum subsp. longum BBMN68]
 gi|322689660|ref|YP_004209394.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
 gi|311773817|gb|ADQ03305.1| AspS [Bifidobacterium longum subsp. longum BBMN68]
 gi|320460996|dbj|BAJ71616.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
          Length = 599

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/605 (38%), Positives = 346/605 (57%), Gaps = 39/605 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V L+GWV R R HGG+ F+D+RD  G+ QVV   +    ++A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVIYDE----DMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117
            +RSE+V+ I G V  R     N ++ TG+IE+ A+ IEIL+ ++ LP  V        E
Sbjct: 62  PLRSEFVIQITGEVRLRPDGNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENESE 121

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294
           LDMEM++V+Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFG 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353
           NP++   +TE+F ++ FRVF           V A+  KGG    R   D   +WAR +G 
Sbjct: 299 NPLV--ELTEYFKNTPFRVFQAPY-------VGAVVFKGGAATPRRQFDAWQDWARQRGA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAY+     E+G +   GPVAK+L+      +R  +  ++GD+ FF AG         
Sbjct: 350 KGLAYVV--FGENGELK--GPVAKNLSDEERAGLREAVGAEEGDAVFFAAGSRESAQLLL 405

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464
              R  +A   G+++   F F W++DFP ++  ++    D A         H+PFTMP  
Sbjct: 406 GAVRVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D     +  YD+VCNG E+  G +R H  ++  +    +GI+KE  + +FG 
Sbjct: 466 DWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGF 525

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPH G+A G DR V +L GA ++R+V  FP +    D L G+P+ +S EQ 
Sbjct: 526 LLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585

Query: 585 RELGL 589
            E G+
Sbjct: 586 AETGV 590


>gi|261366606|ref|ZP_05979489.1| aspartate--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282571425|gb|EFB76960.1| aspartate--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 595

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/593 (38%), Positives = 350/593 (59%), Gaps = 16/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG++ ++D G  + + G + R R  GGIIF D+RD  GI Q+V + D+    F  A
Sbjct: 9   RTRYCGEVSLADAGQEMTVCGSIARARDKGGIIFADLRDTTGILQLVFDEDTPKEVFAKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +S++SE+V+   G +  R+++T    I TG +EL   ++ +LS A+  P  +  E    +
Sbjct: 69  ESLKSEYVVICRGKLRERASKT--DKIATGDVELYVSELRVLSEAQTPPFEIRDEINVND 126

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLRR ++H+ IV R++I+  +R      +F E  TP L  S+PEGARD+LV
Sbjct: 127 DLRLRYRYLDLRRPSMHEPIVLRSKIMQIIRSYFTDNHFTEIETPTLIKSTPEGARDYLV 186

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ YKQ+LM SGFDRYFQIA C+RDED R+DR P EF Q+D EMS
Sbjct: 187 PSRVQPGHFYALPQSPQLYKQILMLSGFDRYFQIARCYRDEDLRADRQP-EFTQVDEEMS 245

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV +DDI+   E +L+ +++E    + V+  F R+ ++DA+ R+G+DKPD R  + + +V
Sbjct: 246 FVTEDDIMTVNEGLLKRLWKEMLGIDLVT-PFERMPWNDAMSRFGSDKPDTRFGLEIQDV 304

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           T  F ++EF+ F+ ++       + AI AKG     +R   D++ E A++ G  GLAY  
Sbjct: 305 TSVFANTEFKPFAAVIEAKG--TIRAINAKGLADKLSRKNIDKLGEVAKTYGAKGLAY-- 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA-GDPLKFCSFAADARNH 419
            RL   G  +      K L      A+   L  + GD    ++  D +K C+     R  
Sbjct: 361 SRLTADGTSSSF---EKFLTEEEKTALYAALGAETGDVLLLVSDADWVKACTALGQVRLD 417

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA++  +I+ + F F W++DFP +E++E+E +    H+PFTMP+        +D  +  A
Sbjct: 418 IARKHDLIDNDKFNFLWVVDFPLFEYSEQEGRWMAMHHPFTMPKAEDLDKIESDPGACHA 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G +R +   +  + F  +G ++E     FG L  A++ G PPHGG+
Sbjct: 478 VAYDIVLNGVELGGGSMRINDPALQDRMFKALGFTEEKARASFGFLMDAYKFGAPPHGGM 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VML+L   ++R+V  FP  QN  + + G+P  V  +QL +L + + 
Sbjct: 538 AYGLDRMVMLMLKKDSIRDVIAFPKVQNAGEPMSGAPDVVDEKQLADLSIALT 590


>gi|182420378|ref|ZP_02951600.1| aspartyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237667017|ref|ZP_04527001.1| aspartate--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182375744|gb|EDT73342.1| aspartyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655365|gb|EEP52921.1| aspartate--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 599

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 233/592 (39%), Positives = 352/592 (59%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+     VG  + L GWV R R  GG+ F+D+RD  GI QVV   +  +  FEIA
Sbjct: 10  RTMMCGEPREEHVGKKITLMGWVQRNRKLGGLEFIDLRDKSGIMQVVFGEEINAEAFEIA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K VR E+ + + G V+ R  E++N N+ TG +EL  + I++LS +E  P+ +    +  E
Sbjct: 70  KGVRPEYCIAVTGEVVKR--ESVNENMPTGFVELKCESIKVLSESETPPIIIKENLDTAE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + +    R++   ++R  +   NF++  TP+L  S+PEGARD+LV
Sbjct: 128 DIRLKYRYLDLRRPDMQRIFDIRSKTTKAIRDYLEEHNFLDVETPVLGKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FYALPQ+PQ YKQLLM SGFDRY+QIA CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYPGMFYALPQSPQIYKQLLMMSGFDRYYQIAKCFRDEDLRANRQP-EFTQVDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQ+DI+   E ++  VF++ + G  V     R+ + +A+ +YG+DKPDLR  + + ++
Sbjct: 247 FVEQEDIMELNEGLIAHVFKKVA-GVDVQLPIKRMTFKEAMEKYGSDKPDLRFGMEITDI 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE     +F VF    ++  G  V A+  KGG    R   D++ E+ ++    GLA+I  
Sbjct: 306 TEDVKDMDFVVFKS--AIEAGGSVRALCLKGGASLGRKPLDKLGEFVKTYKAKGLAWIQL 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           +    G V     +AK L    T+AI   ++ ++GD+   +A  + + F S  A  R  +
Sbjct: 364 K---EGEVK--SSIAKFLTDDVTKAIVNTMNAEEGDAILIVADKNSVVFPSLGA-LRLQL 417

Query: 421 AQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           A++  +I + N F F W+ +FPF+E++EEE++    H+PFT P         +D   +++
Sbjct: 418 AKDFDLIKDKNEFNFTWVTEFPFFEYSEEEERFKACHHPFTAPMDEDLEFVESDPGRVRS 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG E+  G IR H + +  +    +G ++E     FG L +A + G PPHGG+
Sbjct: 478 KAYDLVLNGEELGGGSIRIHDTAIQERMLRALGFTEERAWESFGFLLQALKFGAPPHGGL 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR++M L G +N+++V  FP +QN    L  +P+ V  +QL +LG+ I
Sbjct: 538 AFGLDRMIMFLAGTENIKDVIAFPKNQNAYCYLSEAPNIVDEKQLNDLGISI 589


>gi|313897477|ref|ZP_07831020.1| aspartate--tRNA ligase [Clostridium sp. HGF2]
 gi|312957847|gb|EFR39472.1| aspartate--tRNA ligase [Clostridium sp. HGF2]
          Length = 581

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/590 (37%), Positives = 342/590 (57%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L + D G  V L GWV + R  G ++F+D+RD  GITQ+V   D    E  + 
Sbjct: 3   RTHTNGELRLCDAGKEVTLIGWVAKRRNFGSLVFIDLRDRTGITQLVF--DEQLSEQIRD 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E++L   G VM R  +  N  + TG+IE+  + + I++ AE  P+ V  E +  E  
Sbjct: 61  VRNEYILEATGCVMERKDK--NPKLPTGEIEIQVRAVTIINRAETTPIIVADETDALEDT 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  + + ++ R RI +SMR  + ++ FIE  TP+L  S+PEGARD+LVPS
Sbjct: 119 RLKYRYLDLRRPVMQQKLMLRHRITHSMREYLDSKEFIEIETPMLGRSTPEGARDYLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ GSFYALPQ+PQ YKQLLM SGF+RY+Q A CFRDED R+DR   +F Q+D+E SF+
Sbjct: 179 RVHPGSFYALPQSPQLYKQLLMVSGFERYYQFARCFRDEDLRADR-QTDFTQVDLETSFL 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              +I   ME +L+ + ++   G  +S  F R+ + +A+ RYG+DKPD R  + +  +TE
Sbjct: 238 SDVEIQTMMEEMLQKLMKDV-KGMDISIPFPRLTWTEAMNRYGSDKPDNRFGMELQEITE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F +  F+VF+  ++     +   +P K  G  R   D++ E A+  G  GL  + ++ +
Sbjct: 297 LFENCGFKVFADCIADKGSIKAVVVPGK-AGMTRKEIDKITELAKKNGAKGLVTLKYKDE 355

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E       GP+ K L     +A+ +RL +++ D    ++      C      RNH   EL
Sbjct: 356 ELS-----GPIVKFLAEEEIQALVMRLSLKNEDLVLIVSDAWRTTCEVLGVLRNHFGAEL 410

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G+   + F + W+ DFP +E++EE+ +    H+PFT P+        +D   + A  YD+
Sbjct: 411 GLKKSDEFSYLWVTDFPMFEYSEEDGRWYAMHHPFTRPRDEDMQYIDSDPGKVHAIAYDV 470

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG+E+  G +R +   +  + F  +G ++E ++  FG    A + G PPHGG+A G+D
Sbjct: 471 VLNGYELGGGSLRIYDGAMQDKMFEVLGFTEEKIQENFGWFVDALKYGTPPHGGLAFGLD 530

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           RI M+L  ++++R+V  FP + N    +  +P+ V   QL EL + + E 
Sbjct: 531 RIAMILSESESIRDVIAFPKNANAKCPMSDAPTPVDAAQLEELHIALTEE 580


>gi|317488832|ref|ZP_07947363.1| aspartyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316912061|gb|EFV33639.1| aspartyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 592

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 225/592 (38%), Positives = 346/592 (58%), Gaps = 16/592 (2%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIA 62
           T +CG+L   DVG  V L+GW    R HGG+IF+D+RD  G TQVV +PD      F  A
Sbjct: 12  TATCGELRKGDVGREVVLTGWAWHNRDHGGLIFIDLRDRAGYTQVVVDPDCVSADDFAKA 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +  E+VL + G V  R AE +N N+ TG+IE+ A+ +E+L+ +   P  +    E  E
Sbjct: 72  EHLGREYVLKVAGTVRERGAEAVNPNMATGEIEVLAKSVEVLNTSVTPPFSIEDGIETDE 131

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + R K+R+LD+RR  + + +  R ++  +MR  +    F+E  TPIL  S+PEGARD++V
Sbjct: 132 TTRMKWRYLDIRRPEMFEALHLRHKVAQAMRGALNERGFLEVETPILANSTPEGARDYIV 191

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR N G FYALPQ+PQQ+KQ+LM  G +RY+QIA CFRDED R+DR P EF Q+D+EM 
Sbjct: 192 PSRPNPGRFYALPQSPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQP-EFTQVDIEMG 250

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +D++N ME+V+       + G   +    R+ Y +++ R+G D+PD R  + + ++
Sbjct: 251 FVQGEDVMNLMEDVMAETLA--AVGVEHAFPLERMQYRESMDRFGNDRPDTRFGMELVDI 308

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+   ++ F+VFS +     G  V AI AKG G  +R   +++ + A   G  G+A+I +
Sbjct: 309 TDIVKNTGFKVFSSV--AQSGGVVKAINAKGAGDWSRGDVEKLADIAAENGAKGMAWIAF 366

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
             D         P+ K  +     A++  +D++ GD   F A D  +  S    A R H+
Sbjct: 367 TTDGKEK----SPIIKFFSDEEFAALKEAMDVEPGDLLLF-AADTYEVASAVLSALRLHM 421

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A  L +      +  W+++FP ++++E+EKK    H+PFT           +D L+  ++
Sbjct: 422 ADALNVPR-EGHQLLWVVNFPMFKYDEDEKKYAAEHHPFTHVLDEDVDKIESDPLACGSY 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV +GFE+  G IR H ++         G++ E +E +FG L  A + G PPHGGIA
Sbjct: 481 SYDLVMDGFEVGGGTIRIHNADEQRAVLRTCGLTDEEIEEKFGHLIHALELGAPPHGGIA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL G  ++R+V  FP + +  D + G+PS V+  QL+E+ LR +
Sbjct: 541 LGLDRLVMLLGGKASIRDVIAFPKTSSASDPMTGAPSAVTGRQLKEVNLRTL 592


>gi|326798552|ref|YP_004316371.1| aspartyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326549316|gb|ADZ77701.1| aspartyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 583

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 228/593 (38%), Positives = 341/593 (57%), Gaps = 20/593 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61
           YRTH+CG L ++D+G  + L GWV + R  GG+ F+D+RD YG+TQ+   A+ D A    
Sbjct: 2   YRTHTCGQLTLADLGKNITLCGWVQKSRDLGGMTFIDMRDRYGVTQLAFNADDDEALRAR 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +  E+V+ + G V+ RS++  N  I TG+IE+    + +L+ A+  P  +  E +  
Sbjct: 62  ARELGREYVIQVRGTVIERSSK--NLKIPTGEIEIKVADLVVLNAAKLPPFLIEDETDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR+ +  N+V R ++  ++R  +  + F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRNPVRNNLVLRHQMAQAVRSFLDQQGFLEVETPVLIKSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N+G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNEGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +FVEQ+DILN  E ++  +F++  N         R+ Y DA+R YG+DKPD R  +    
Sbjct: 239 AFVEQEDILNLFEELISYLFKKVKNVEI--GKLPRMTYADAMRLYGSDKPDTRFGMQFVE 296

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQ--GQPGLAY 358
           +      + F VF           V  I A+G     R   D + ++ +    G  GL Y
Sbjct: 297 LNPVLQGAGFPVFDN------AELVVGIKAEGCASYTRKQIDALTDFVKRPQIGATGLVY 350

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  R +E G++     V K  N    +A    +D   GD    +AGD  K      + R 
Sbjct: 351 L--RYNEDGSLK--SSVDKFFNQEQLQAWATAMDANVGDLILVMAGDADKTRKQLNELRL 406

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  +LG+ + N F   W++DFP  EW+++ K+    H+PFT P+    +L       ++
Sbjct: 407 ELGNQLGLRDKNKFSALWVVDFPLLEWDDDTKRYHAMHHPFTSPKPEDIALLDTAPGDVR 466

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G IR    ++    F ++G ++E  + +FG L  AF  G PPHGG
Sbjct: 467 ANAYDMVINGTEVGGGSIRIFEKDLQQLMFKHLGFTQEEAQTQFGFLMDAFTYGAPPHGG 526

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IA G DR+V +  G  ++R+V  FP +    D+++ SPS++S EQL EL + I
Sbjct: 527 IAFGFDRLVSIFAGLDSIRDVIAFPKNNAGRDVMIDSPSSISQEQLDELKIEI 579


>gi|260101664|ref|ZP_05751901.1| aspartate-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260084524|gb|EEW68644.1| aspartate-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|328467648|gb|EGF38703.1| aspartyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 617

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/595 (38%), Positives = 345/595 (57%), Gaps = 23/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +G  V L GWV RVR  G ++F+D+RD  GI Q+V N DS     +IA
Sbjct: 7   RTDYCGNITEKYIGENVNLYGWVQRVRNLGNLVFIDLRDRAGIVQIVVNKDSGKKLMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E+VL + G V+ RS   +N ++ TGQ+E+ A  I +L+ A+  P  +    E  E
Sbjct: 67  DSLGNEYVLQVKGKVVKRS--EVNPDMKTGQVEVDATDIIVLNKAKNPPFEIKNGVEISE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F ++  I +  E +L+ + ++   G  +     RI + D++ +YG DKPD R  +++H++
Sbjct: 244 FADEKTIQDYTEGLLKKIMKDV-KGIDLKTPIKRISWTDSMNKYGCDKPDTRYGMLIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS   ++  G  V  I  K G    +R   D+  E+ +     GLA++ 
Sbjct: 303 SPIFKDSDFKVFSG--AIADGGFVKGIAVKNGAEVYSRKKIDQKAEFIKRFHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E G  +  GPVA+ L   N EA++   D++ G+   FIA D  K C    D+ NH+
Sbjct: 361 F---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFIA-DKWKVC---CDSLNHL 411

Query: 421 ----AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
               A+E  II    ++F WI+D+P +E++E   +   AH+PFTMP      L   +   
Sbjct: 412 RREFAKETDIIPKGVYDFVWIVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHK 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG E+  G IR H   +    F  +G +++    +FG L  A   G PPH
Sbjct: 472 AHARSYDIVMNGDEMGGGSIRIHKRSIQEDMFKALGFTEKRAYEQFGYLLDALDMGFPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR  M+L    N+R+V  FP + +  + +M +P+ V+ +QL +LG+ +
Sbjct: 532 AGLAIGLDRFAMMLADKDNIRDVLAFPKNASASEPMMHAPAPVADQQLNDLGIEV 586


>gi|291545651|emb|CBL18759.1| aspartyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 599

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 234/598 (39%), Positives = 344/598 (57%), Gaps = 15/598 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60
           +RT  C ++    VG  V L GWV + R  GG++F+D+RD  GI Q++    + D   F 
Sbjct: 9   HRTCRCAEVTTEMVGKEVTLMGWVAKARNKGGLVFVDLRDRSGIMQLIFENGSIDEEGFT 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ + G V  R    +N N+ TG+IEL  + + +L+ A+  P P+    + 
Sbjct: 69  KAGKLRSEFVIAVTGTVEKRGG-AVNENLATGEIELRVKSLRVLAEADVPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  L +NI+ ++++    R     E F+E  TP+L  S+PEGARD+
Sbjct: 128 KDEIRLKYRYLDLRRPDLQRNIMMKSKVAQLTRQFFTEEGFLEIETPMLGKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFY LPQ+PQ YKQLLM SGFDRY QIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGSFYGLPQSPQLYKQLLMCSGFDRYIQIARCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E  L  +F+E  + + V     RI + +A+ R+G+DKPD+R  + +H
Sbjct: 247 LSFVDVDDVIDVNERYLAFLFKEVLDID-VKLPIQRITWQEAMDRFGSDKPDMRFGMELH 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           +V++      F VF+  L    G  V  I A+G G   R   D++ E+ +  G  GLAYI
Sbjct: 306 DVSDIVKDCGFGVFTGAL--ENGGSVRGINAEGQGAMPRKKIDKLVEFVKGYGAKGLAYI 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
               D +   +     AK +     +A+   +D + GD   F A             R  
Sbjct: 364 AIAEDGTRKSS----FAKFMTDEEMDALVKAMDGKPGDLLLFAADKTKLVYDVLGALRLE 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+++ +++ N + F W+ +FP  EW+EEE +    H+PFTM       L   D   ++A
Sbjct: 420 LAKQMDLLDKNEYRFVWVTEFPLLEWSEEENRFTAMHHPFTMLMEEDLPLLDTDPGKVRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G +R H  ++  + F  +G +KE    +FG L  AF+ G+PPH G+
Sbjct: 480 KAYDIVLNGNEIGGGSVRIHQDDIQERMFEALGFTKEAAHEQFGFLLDAFKYGVPPHAGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VML+  A  +R+V  FP  ++   L+  SPS VS  QL ELGL +   P+K
Sbjct: 540 AYGLDRLVMLMAKADTIRDVIAFPKVKDASCLMTQSPSQVSEAQLHELGLDL--EPQK 595


>gi|255327172|ref|ZP_05368247.1| aspartate--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255295790|gb|EET75132.1| aspartate--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 590

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 238/604 (39%), Positives = 336/604 (55%), Gaps = 31/604 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L  +++G  V L+GWV R R HGG+ F+D+RD  G+TQ V + + A FE    
Sbjct: 3   RTHTNGELTAANIGETVTLTGWVARRRDHGGVAFVDLRDREGVTQCVFH-NEADFE---H 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL + GLV  R     N N+ TG+IE+    +E+L+ A  LP  +    E  E  
Sbjct: 59  LRNEYVLRVTGLVTKRPEGNENPNLATGEIEVEVSAVEVLNTAAPLPFQIDEHVEVGEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR    + +  R+    + R  +  + +IE  TP LT S+PEGARDFLVP+
Sbjct: 119 RLRYRYLDLRRPEPARIMRLRSDANRAARNLLAEDGYIEVETPTLTRSTPEGARDFLVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLL   G ++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +Q+DI+   E ++  V+        V     R+ Y DA+ +YGTDKPDLR  + +  +TE
Sbjct: 238 DQEDIIELGERIVEAVWNLID--VKVPRPIQRMTYKDAMEKYGTDKPDLRFGLELTELTE 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 296 YFKDTTFRVFKAPY-------VGAVVMPGGASQPRRTLDAWQEWAKQRGAKGLAYVL--I 346

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPVAK++       +      + GD  FF AG+     +    AR  I   
Sbjct: 347 QEDGEL--TGPVAKNITDAERAGLAEATGAKPGDCIFFAAGEAKASRALLGAARVEIGHR 404

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473
            G+I    + F W++D P +E + E  +  D A         H+ FT P+         D
Sbjct: 405 TGLIKDGEWSFVWVVDAPMFESSAEATESGDVALGHSAWTAVHHAFTSPKPEFLDTFDTD 464

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  A+ YD+VCNG EI  G IR H  +V  + F+ +GI +E  + +FG L  AF+ G 
Sbjct: 465 PGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFAVMGIGEEEAQEKFGFLLDAFKYGA 524

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PP GGIA G DRIV LL G  ++REV  FP + N  D L  +P+ ++ EQ +E G+    
Sbjct: 525 PPMGGIAFGWDRIVSLLAGVDSIREVIAFPKTGNGFDPLTAAPAPITPEQRKEAGVDF-- 582

Query: 594 NPKK 597
            PKK
Sbjct: 583 KPKK 586


>gi|241766054|ref|ZP_04763970.1| aspartyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241363935|gb|EER59223.1| aspartyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 614

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 239/607 (39%), Positives = 353/607 (58%), Gaps = 22/607 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  + +G  V LSGWV+R R HGG+IF+D+RD  G  QVV +PD A  F+ A+
Sbjct: 14  RSHYCGLVTEALLGQTVTLSGWVNRRRDHGGVIFIDLRDREGSVQVVCDPDRAEMFKTAE 73

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + G+V +R A T N N+ +G+IE+   ++ +L+ +   P  +  E    E+
Sbjct: 74  EVRNEFCVQVKGVVRARPAGTTNDNLQSGKIEVLCHELNVLNPSVTPPFQI-DEENLSET 132

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N++ R R+   +R  + A  FI+  TP+LT S+PEGARD+LVP
Sbjct: 133 TRLTHRVLDLRRPYMQNNLMLRYRVSMEVRKFLDANGFIDIETPMLTKSTPEGARDYLVP 192

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 193 SRVHDGHFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 251

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS---NNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +++ +I +  + +++ VF+     NT+      F  + Y DA  RYG+DKPDLR  +   
Sbjct: 252 MDEQEIRDMFQGMIKTVFQ-----NTLGVDLGEFPVMTYQDAAYRYGSDKPDLRVKLEFT 306

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEV-WAIPA---KGGGGNRAFCDRMNEWARSQGQPGL 356
            +T+     +F+VFS   ++  G  V   +P    +GGG +R   D   E+ +  G  GL
Sbjct: 307 ELTDVMKDVDFKVFSGAANMKNGRVVGLRVPGGSVEGGGISRGEIDAYTEFVKIYGAKGL 366

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AYI       G      P+ K+++    +A+  R   QDGD  FF A D  K  + A  A
Sbjct: 367 AYIRVNELAKGRDGLQSPIVKNIHDAALQAVLERTGAQDGDLIFFGA-DKEKIVNDAIGA 425

Query: 417 -RNHIAQ-ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            R  I   E G  N    + +   W++DFP +E +EE  +    H+PFT P+ G E    
Sbjct: 426 LRIKIGHSEFGKKNGLFDDRWAPLWVVDFPMFEHDEESDRWVAVHHPFTAPKDGHEDYMV 485

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
                  +  YD+V NG+E+  G +R H ++V  + F  + I+ E  + +FG L  A Q 
Sbjct: 486 TAPEKCISKGYDMVLNGWEMGGGSVRIHRADVQQKVFDALKITPEEAQQKFGFLLDALQY 545

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G+DRIV L+ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+
Sbjct: 546 GAPPHGGLAFGLDRIVTLMTGAESIRDVIAFPKTQRAQCLLTQAPSVVDEKQLRELHIRL 605

Query: 592 VENPKKI 598
             NP  +
Sbjct: 606 -RNPDAV 611


>gi|197303676|ref|ZP_03168713.1| hypothetical protein RUMLAC_02403 [Ruminococcus lactaris ATCC
           29176]
 gi|197297196|gb|EDY31759.1| hypothetical protein RUMLAC_02403 [Ruminococcus lactaris ATCC
           29176]
          Length = 596

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/596 (39%), Positives = 341/596 (57%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH CG+L   +VG  V + GWV + R  GG++F D+RD  GI QVV      + A  E 
Sbjct: 10  RTHRCGELSAVNVGETVTIMGWVQKNRNKGGLVFTDVRDRSGIIQVVCEEGTTEPALIEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+RSE+V+ I G V  RS   +N  I TG+IE+   ++ ILS A   P P+    +  
Sbjct: 70  AASLRSEYVVAIVGKVARRSG-AVNDKIATGEIEVIPSELRILSEAMTPPFPIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR KYR+LDLRR  L +N+  +++++   R     E F+E  TP+L  ++PEGARD+L
Sbjct: 129 EEIRLKYRYLDLRRPDLQRNLKMKSQVMTLTRQYFAEEGFLEVETPMLGKTTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ GSFY LPQ+PQ YKQLLM SG DRY QIA CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGSFYGLPQSPQLYKQLLMCSGVDRYIQIARCFRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E  L+ +F E  +   V     R+ + +A+ R+G+DKPDLR  + + +
Sbjct: 248 SFVDVDDVIDVNERYLKKLFREVLDVE-VQLPIQRMTWQEAMDRFGSDKPDLRFGMELTD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V+E      F VF+  L    G  V  I AKG GG  R   D++  + +  G  GLAY+ 
Sbjct: 307 VSEVVKDCGFGVFTAAL--ENGGSVRGINAKGQGGMPRKKIDKLTAFVKDYGAKGLAYV- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G V      AK +     +A+   ++ + GD   F A             R  +
Sbjct: 364 -AIQEDGTVK--SSFAKFMTEEQMQALIAAMNGEAGDLLLFAADKNKVVWDSLGALRIEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +++ N + F WI +FP  EW+EE+ +    H+PFTMP         +D   ++A 
Sbjct: 421 AKQLELLDKNEYRFVWITEFPLLEWSEEQNRFVAMHHPFTMPMEEDLQYIESDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R    ++  + F  +G + E   ++FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIFQDDIQEKMFHALGFTDEQAYSQFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VML+    ++R+V  FP  ++   L+  +P+    +QL ELGL +V   K
Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKIKDASCLMTEAPTPADTKQLEELGLEVVTEEK 596


>gi|262381384|ref|ZP_06074522.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262296561|gb|EEY84491.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 585

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/590 (38%), Positives = 342/590 (57%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT +CGDL ++D G  V L+GWV + R  GG+ F+DIRD YGITQ+V N   D+A  E 
Sbjct: 2   YRTRTCGDLRLADEGLVVTLAGWVQKTRKMGGMTFVDIRDRYGITQLVFNQEVDAALCEK 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  RS++  NA+I TG IEL   ++ +L+ A   P  +  E +  
Sbjct: 62  ANKLGREFVIQVTGTVRERSSK--NAHIPTGDIELIVSELNVLNSALTPPFTIEEETDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  + KN+  R R+   +R  +  + F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRACVRKNLELRHRMAFEVRRYLDEQGFLEVETPVLVNSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D+LN  E + + +F+    G     +F+R+ + DA+++YG+DKPDLR  +    
Sbjct: 239 SFVEQEDVLNMFEGMAKHLFKVI-RGVEFKESFMRMTWQDAMKQYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-IGGICAEGAASYTRKQLDALTEFVKRPQVGAKGLVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  GNV     V K  +    + ++     + GD    ++G D +K      + R  
Sbjct: 352 ARVEADGNVK--SSVDKFYSQEVLQEMKNAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + + F   W++DFP +EWNE++++    H+PFT P      L   D  +++A
Sbjct: 410 MGNQLGLRDKDKFVCLWVIDFPLFEWNEDDQRFYAMHHPFTSPNPDDIPLLDTDPGAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++  + F  +G ++E  + +FG L  AF+ G PPHGG+
Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSQLQDKMFKLLGFTEERAQEQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L  G  ++R+   FP + +  D+++ +P  +   QL EL L
Sbjct: 530 AYGLDRFVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGVLDPAQLDELNL 579


>gi|229552366|ref|ZP_04441091.1| aspartate--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539737|ref|YP_003174236.1| aspartyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|229314268|gb|EEN80241.1| aspartate--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257151413|emb|CAR90385.1| Aspartyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 601

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/591 (38%), Positives = 332/591 (56%), Gaps = 15/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT   GD+    +   V L GWV + R  G +IF+D+RD  GI Q+V +   D     +A
Sbjct: 4   RTCYAGDVNTDYLDQEVTLKGWVQKRRSLGSLIFIDLRDREGIVQLVFSEAIDRDALTVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVRSE+V+ + G+V  R  + +N  + TG IE+    I IL+ A+  P  +       E
Sbjct: 64  NSVRSEYVVEVQGVVKKRKPQAVNPEMKTGDIEVEVHDITILNKAKTPPFYIEDNVAVTE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             + KYR+LDLRR  + KNI  R  I+ S+   +    FI+  TP LTAS+PEGARD+LV
Sbjct: 124 ETKLKYRYLDLRRPEMQKNIFTRAHIMRSVHHYLDDNGFIDVETPTLTASTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGSFYALPQSPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I +  E ++  V  +   G  V   F RI + +A+ +YG+DKPDLR  + + +V
Sbjct: 243 FLSAEEIQDITEGLIAQVMHDV-KGIDVDLPFQRITWQEAMDKYGSDKPDLRFDMQIQDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++    S+F+VF+   +V  G +V AI   GG    +R   D   ++ +  G  GLA++ 
Sbjct: 302 SDFVKDSDFKVFAG--AVQNGGQVHAIVLPGGAAKYSRKMIDAQQDYIKRFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ + G     GP+AK     +  A+   +    GD   F+A             R H 
Sbjct: 359 -KVTDDGI---SGPIAKFFG--DGAALTQAVGAHTGDLVLFVADKAKVVADALGYLRTHF 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +LG+I+   F FCW++D+P +E++E  ++   AH+PFTMP      L   D  +  A 
Sbjct: 413 GHDLGLIDEKEFRFCWVVDWPLFEYDEGIQRWVPAHHPFTMPNEEDVHLLDTDPHAAHAQ 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  ++  +    +G + E  +  FG L  A   G PPHGG+A
Sbjct: 473 SYDIVLNGYELGGGSIRIHNRDIQEKMLKALGFTPERAQKSFGFLLNALDYGFPPHGGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR  MLL G  N+R+V  FP +    + +  +PS V+  QL++LG+ +
Sbjct: 533 IGLDRFTMLLTGRDNIRDVIAFPKNSKASEPMTSAPSPVADIQLKDLGIEV 583


>gi|299144029|ref|ZP_07037109.1| aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518514|gb|EFI42253.1| aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 591

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/593 (38%), Positives = 353/593 (59%), Gaps = 15/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT+ CG+L  S++G  + L GW+ + R  G IIF D+RD  GI Q+V +   D   FE A
Sbjct: 10  RTYYCGELRESNIGQEITLMGWIAKERNLGSIIFADLRDRTGIVQIVFDDTVDKNLFEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+V+ + G V  RS  +IN  I TG+IEL A ++ IL+ +E  P+ +  +    E
Sbjct: 70  VKLRSEFVVAVIGKVRERS--SINDKIPTGKIELIASELRILNESEVPPIYIKDDDNVAE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + R K R LDLR+  + KN++ R+++    R     E F+E  TP+LT  +PEGARD+LV
Sbjct: 128 NTRLKNRALDLRKPYMQKNLMTRSKLYKITRDFYYNEGFMEIETPMLTKPTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ  KQLLM SGFDRY QI  CFRDED R++R P EF Q+D+EMS
Sbjct: 188 PSRVNPGKFYALPQSPQLMKQLLMVSGFDRYMQITKCFRDEDLRANRQP-EFTQIDLEMS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE DD+++  E  L+  F+E  N + +    +R+ Y +A+ R+G DKPDLR  + + N+
Sbjct: 247 FVEVDDVIDINERFLKYAFKEMLNID-IELPLMRMKYAEAMDRFGVDKPDLRFGLELVNI 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF      + G  V  I  K G    +R    ++ ++ ++ G  GLA+I 
Sbjct: 306 SELVKECGFKVFES--CTDEGKSVRGINIKNGAEFYSRKAIGKLEDFVKTYGAKGLAWI- 362

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E+G  +   P++K L+      I  +L  + GD   F+A           + RN +
Sbjct: 363 -KVEENGINS---PISKFLSEDVVNDIMNKLKAEIGDLLVFVADKNNIVFDSLGNLRNSV 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++ +I+ + F+  WI +FP +E++E+E++    H+PFT P     +L        +A 
Sbjct: 419 AKDMNLIDKDDFKLLWITEFPLFEYDEDEQRYVAKHHPFTSPMDEDLNLIETAPHLARAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR +  ++  + F  +G ++E  E++FG L  AF+ G PPHGG+A
Sbjct: 479 AYDIVINGDEMGGGSIRINNPQIQSKMFKALGFTEEEAEDKFGFLLEAFKYGAPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR+VM    + N+R+V  FP +Q+   LL G+P+ +S  QL E+ ++++E
Sbjct: 539 YGLDRLVMTFTKSDNIRDVIAFPKTQSATCLLTGAPTELSDLQLNEVHIKVIE 591


>gi|189438881|ref|YP_001953962.1| aspartyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|213691602|ref|YP_002322188.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|227546745|ref|ZP_03976794.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|239620721|ref|ZP_04663752.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|322691621|ref|YP_004221191.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|238692033|sp|B3DPM0|SYD_BIFLD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781717|sp|B7GPT0|SYD_BIFLI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189427316|gb|ACD97464.1| Aspartyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|213523063|gb|ACJ51810.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|227212707|gb|EEI80588.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|239516297|gb|EEQ56164.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|320456477|dbj|BAJ67099.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320457690|dbj|BAJ68311.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 599

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/605 (38%), Positives = 346/605 (57%), Gaps = 39/605 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V L+GWV R R HGG+ F+D+RD  G+ QVV   +    ++A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVIYDE----DMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117
            +RSE+V+ I G V  R     N ++ TG+IE+ A+ IEIL+ ++ LP  V        E
Sbjct: 62  PLRSEFVIQITGEVRLRPDGNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENESE 121

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294
           LDMEM++V+Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFG 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353
           NP++   +TE+F ++ FRVF           V A+  KGG    R   D   +WAR +G 
Sbjct: 299 NPLV--ELTEYFKNTPFRVFQAPY-------VGAVVFKGGAATPRRQFDAWQDWARQRGA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAY+     E+G +   GPVAK+L+      +R  +  ++GD+ FF AG         
Sbjct: 350 KGLAYVV--FGENGELK--GPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESAQLLL 405

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464
              R  +A   G+++   F F W++DFP ++  ++    D A         H+PFTMP  
Sbjct: 406 GAVRVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D     +  YD+VCNG E+  G +R H  ++  +    +GI+KE  + +FG 
Sbjct: 466 DWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGF 525

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPH G+A G DR V +L GA ++R+V  FP +    D L G+P+ +S EQ 
Sbjct: 526 LLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585

Query: 585 RELGL 589
            E G+
Sbjct: 586 AETGV 590


>gi|256826890|ref|YP_003150849.1| aspartyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583033|gb|ACU94167.1| aspartyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 592

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/598 (38%), Positives = 350/598 (58%), Gaps = 20/598 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--- 58
           H   T +CG+L ++D G+ V L+GWV   R HGG+IF+D+RD  G TQ V +PD      
Sbjct: 8   HCMHTRTCGELRLADEGTEVTLTGWVWHNRDHGGLIFVDLRDRTGYTQCVFDPDCVTEEE 67

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F  A+ +  E+V+ + G V +R   ++N  + TG+IE+ A+ +++L+ +   P  +    
Sbjct: 68  FHAAEHLGREYVIEVTGTVRARGEGSVNPQMATGEIEVLARSLQVLNTSVTPPFAIEDGI 127

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  E+ R K+R++DLRR  +   +  R  +  +MR  +    FIE  TPIL  S+PEGAR
Sbjct: 128 ETDETTRMKWRYMDLRRPEMFNALKLRHTVAQAMRAALNKRGFIEVETPILANSTPEGAR 187

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR N G FYALPQ+PQQ+KQ+LM  G +RY+QIA CFRDED R+DR P EF Q+D
Sbjct: 188 DYLVPSRPNPGRFYALPQSPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQP-EFTQVD 246

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTDKPDLRNP 296
           +EMSFV + D+++ ME    GVF+E      V ++F   R+ + +A+ R+G D+PD+R  
Sbjct: 247 IEMSFVSESDVMDLME----GVFQEVLEAAGVEHSFPLERMPWKEAMDRFGCDRPDVRFG 302

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPG 355
           + + ++T+   +  F+VF+   +   G  V AI AKG G  +R   +++ E A + G  G
Sbjct: 303 MELVDLTDIVANCGFKVFAG--AAASGNIVKAINAKGAGDWSRGDIEKLAEVAAANGAQG 360

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +A+I +  D         P+ K L       I+  ++++ GD   F A       +  A 
Sbjct: 361 MAWIAYTSDGKEK----SPIIKFLGEEVHNQIKTAMNVEPGDLVLFAADTFAVANAVLAA 416

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLKGNDL 474
            R H+A  L I         WI+DFP +++++E KK    H+PFTM PQ     ++  D 
Sbjct: 417 LRLHMADLLHIERPG-HRLLWIVDFPMFKYDDEAKKYAAEHHPFTMIPQSDWVKIE-TDP 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L+  ++ YD+V +GFE+  G IR H +E+  +     G++ E +E +FG L  A + G P
Sbjct: 475 LACGSYSYDIVMDGFEMGGGSIRIHDAELQKRVLRRCGVADEDMEVKFGHLIHALELGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           PHGGIA G+DR+VMLL    ++R+V  FP + +  D + G+P  V+  QL+E GLRI+
Sbjct: 535 PHGGIALGLDRLVMLLTDKSSIRDVIAFPKTSSAADPMTGAPGQVTARQLKEAGLRIL 592


>gi|295136381|ref|YP_003587057.1| aspartyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294984396|gb|ADF54861.1| aspartyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 583

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 224/595 (37%), Positives = 346/595 (58%), Gaps = 23/595 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR+H+CG+L  S +G+ V LSGWV ++R  G ++++D+RD YGITQ++ + + +  ++ K
Sbjct: 2   YRSHTCGELNSSKIGNEVTLSGWVQKIRNKGFMVWVDLRDRYGITQLIFDEERSSEDLMK 61

Query: 64  SVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              +   E+V+ + G V+ R  E+ N NI TG+IE+  +++ IL+ +   P  +  E + 
Sbjct: 62  KAATLGREFVIQVKGDVIER--ESKNPNIATGEIEVLVKELAILNASLTPPFTIEEETDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR+ +   ++ R ++   +R  +  + FIE  TP L  S+PEGARDF
Sbjct: 120 GEDLRMKYRYLDIRRNPVKNKLIFRHKVGMQVRNYLSNQGFIEVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DILN  E + R + +E +  N   + F R+ YD+A+R+YG DKPD+R  +   
Sbjct: 239 MAFVEQEDILNIFEGLTRHLLKEIN--NITIDAFPRMTYDEAMRKYGNDKPDIRFGMEFA 296

Query: 301 NVTEHFVHSEFRVFSK---ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + +   +  F VF +   ++ +       A+P       R   D +  W + + Q G  
Sbjct: 297 ELDDIAKNKGFNVFDQQELVVGI-------AVPG-AASYTRKQIDALISWVK-RPQIGAN 347

Query: 358 YIFW-RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            + W + ++ G++     V K     N +        + GD    +AGD  K  S  +  
Sbjct: 348 GLVWAKYNDDGSLK--SSVDKFYTEENLKEWAQATGAKPGDLILVMAGDANKTRSQLSAL 405

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R H+  ELG+   + F   W++DFP  EW+EE ++    H+PFT P+     L   D   
Sbjct: 406 RMHLGNELGLRKPDEFAPLWVIDFPLLEWDEETERYHAMHHPFTSPKAEDIPLLATDPGK 465

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YDLV NG EI  G IR H  E   + FS++G ++E  + +FG L  AFQ G PPH
Sbjct: 466 VRANAYDLVLNGNEIGGGSIRIHDKETQSKMFSHLGFTEEEAKEQFGFLMNAFQYGAPPH 525

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GGIA G DR+  +L G + +R+   FP +    D+++ +PS +   QL+EL L++
Sbjct: 526 GGIAFGFDRLTAILGGQETIRDFIAFPKNNAGRDVMIDAPSKLDESQLKELSLKL 580


>gi|326514634|dbj|BAJ96304.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 676

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 232/599 (38%), Positives = 345/599 (57%), Gaps = 25/599 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R   CG+LG  D G  VRL GWV   R H G+ FL +RD  G+ QV   P+    + +  
Sbjct: 88  RDALCGELGAGDAGRRVRLCGWVALRRSHAGLTFLTLRDSSGMVQVTTLPEYPEVYAVVN 147

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV-----FGE 117
            +R E V+ ++G+V  R  E  NA++ TG IE++A ++ +L SV   LP P+       E
Sbjct: 148 KLRVESVVSVEGVVRLRPTEAFNADMRTGAIEIAADRVSVLNSVTRSLPFPITTADTVTE 207

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPE 175
           R +PE +R ++R LDLRR  +  N+  R ++I  +R R + +  +F+E  TPIL+ S+PE
Sbjct: 208 R-FPEEVRLRFRVLDLRRPQMQSNLRLRHKVIKHIR-RYLEDRHDFVEIETPILSKSTPE 265

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARD+LVPSRV  G+ +ALPQ+PQ +KQ+LMASGF++YFQIA CFRDED R+DR P EF 
Sbjct: 266 GARDYLVPSRVQPGTCFALPQSPQLFKQMLMASGFEKYFQIARCFRDEDLRADRQP-EFT 324

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           QLDME++F   +D+L   E ++  +F+E  +   +   F R+ Y +A+ RYGTD+PDLR 
Sbjct: 325 QLDMEIAFTSMEDMLKLNEELMIHIFQEVGDIK-LPKCFPRLTYTEAMNRYGTDRPDLRF 383

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD----RMNEWARSQ 351
              + + ++ F+ S F+VF+  L      +   +P    GG + F +    +   +A + 
Sbjct: 384 DWELKDASDVFLGSSFKVFADTLENGGVIKALCVP----GGAKVFSNTDLKKGTVYAEAS 439

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
                   F ++ ++G + G+GP+   L     E +   LD + GD   F  G+      
Sbjct: 440 KAGAKGLPFLKVMDNGELEGVGPLVSSLKPEKKEHLLELLDAKAGDLILFALGEQSTANQ 499

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
                R  IA +L +I+ +     W+ DFP +EWN +E++ +  H+PFT P    E +  
Sbjct: 500 ILGRLRLFIAHKLEVIDTSAHSILWVTDFPMFEWNSDEQRYEALHHPFTAPNP--EDM-- 555

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           NDL S +A  YD++ NG EI  G +R + S+V  + F  +GIS E  E +FG L   F  
Sbjct: 556 NDLPSARALAYDMIYNGVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDM 615

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G PPHGGIA G+DR+VMLL    ++R+V  FP +      L  +PS V  +QL++LGLR
Sbjct: 616 GAPPHGGIAYGLDRLVMLLARESSIRDVIAFPKTTTAQCSLTKAPSPVDPQQLKDLGLR 674


>gi|91781802|ref|YP_557008.1| aspartyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123359170|sp|Q145N3|SYD_BURXL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91685756|gb|ABE28956.1| aspartyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 599

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 238/593 (40%), Positives = 342/593 (57%), Gaps = 10/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F+ A+
Sbjct: 4   RSEYCGLVTEELLGQSVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L I G+V +R   T NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCLQIKGVVRARPEGTTNAALKSGKIEVLCHELIVLNPSITPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDAQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQIVKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+E + G T+   F  + Y +A+RR+G+DKPDLR  +   ++T
Sbjct: 242 LSEQEIRDLFEAMIRHVFKE-TIGVTLDEKFPVMLYSEAMRRFGSDKPDLRVKLEFTDLT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAVRDVDFKVFSTPANTKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422
              G      P+ K+L+    +AI  R   QDGD  FF A D  K  + +  A R  I  
Sbjct: 361 VAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            E G  N    + ++  W++DFP +E++EE+ +   AH+PFT P+         D     
Sbjct: 420 SEFGKANGLVESGWKPLWVIDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCL 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R H  EV  + F  + I+ E  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IA G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSEVDERQLRELHIRL 592


>gi|229820498|ref|YP_002882024.1| aspartyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|259511852|sp|C5C5S1|SYD_BEUC1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229566411|gb|ACQ80262.1| aspartyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 601

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 248/610 (40%), Positives = 335/610 (54%), Gaps = 38/610 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT   G L        V L+GWV R R HGG+ F+D+RD  GI QVV   ++    +A  
Sbjct: 3   RTSPAGSLRAEHTAQVVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVIRDEA----VAHP 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREY- 120
           +R+E+VL + G V  R A   N N+ TG+IE+ A  + +L+ A  LP  V     + E  
Sbjct: 59  LRNEFVLQVTGEVSRRPAGNENPNLPTGEIEVVASDVVVLNSAAALPFQVSTALADTEAI 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR    + I  R +   + R  + AE F+E  TP LT S+PEGARDF
Sbjct: 119 GEEVRLKYRYLDLRRPAPARAIRLRAKANQAARRVLDAEEFVEIETPTLTRSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 179 LVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPII 298
           MSFVEQDD++   E VL  ++E    G T+     R+ +DDA+R YGTDKPDLR  NPI+
Sbjct: 238 MSFVEQDDVIALAEKVLVALWELI--GFTIPTPIPRMTFDDAMRLYGTDKPDLRFGNPIV 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
              +T +F  + FRVF         Y    + A G    R   D   EWA+ +G  GLAY
Sbjct: 296 --ELTSYFADTPFRVFQS------EYVGAVVMAGGASLPRRQFDAWQEWAKQRGARGLAY 347

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E G+  G GPVAK+L+      +R       GD+ FF AG      +    AR 
Sbjct: 348 V--TFPEDGSDLG-GPVAKNLSDAERAGLREATGAAPGDAVFFAAGATTPSRALLGAARQ 404

Query: 419 HIAQELGIINC----NCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQG 464
            IA+  G+I+       + F W++D P ++   +     D A         H+ FT P  
Sbjct: 405 EIAKRTGLIDSADQEGAWAFVWVVDAPLFKPTGDAADDGDVALGHSAWTAVHHAFTSPTP 464

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D  S  +  YD+VCNG EI  G IR H  +V  + F  +GI     + +FG 
Sbjct: 465 EWIDTFEQDPGSALSNAYDIVCNGNEIGGGSIRIHRRDVQERVFQVMGIDAAEAQEKFGF 524

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF  G PPHGGIA G DRI+ LL G++++REV  FP S    D L  +P+ ++ EQ 
Sbjct: 525 LLDAFSYGAPPHGGIAFGWDRILALLTGSESIREVIAFPKSGGGYDPLTQAPAPITAEQR 584

Query: 585 RELGLRIVEN 594
           RE G+  V +
Sbjct: 585 RESGVDAVPD 594


>gi|153806333|ref|ZP_01959001.1| hypothetical protein BACCAC_00592 [Bacteroides caccae ATCC 43185]
 gi|149131010|gb|EDM22216.1| hypothetical protein BACCAC_00592 [Bacteroides caccae ATCC 43185]
          Length = 587

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           +RTH+CG+L +SDV   V LSGWV R R  GG+ F+D+RD YGITQ+V N +  +   E 
Sbjct: 2   FRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  R ++  NANI TG IE+   ++ +L+ A   P  +    +  
Sbjct: 62  ANKLGREFVIQVKGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR+ +  N+  R ++   +R  +    FIE  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRTYLDKLGFIEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI+ T E + + +F+    G  ++  FLR+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQEDIIATFEGMAKHLFKTL-RGVELTEPFLRMSWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y V  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419
            R++  G V     V K       + ++     + GD    ++GD  +K      + R  
Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  +++A
Sbjct: 410 MGSQLGLRDKNKFACLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVINGVEVGGGSIRIHDAQLQAKMFEILGFTPEKAQAQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQTQLDELNL 579


>gi|283458011|ref|YP_003362618.1| aspartyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134033|dbj|BAI64798.1| aspartyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 620

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 238/608 (39%), Positives = 337/608 (55%), Gaps = 31/608 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M   RTH+ G+L  +++G  V L+GWV R R HGG+ F+D+RD  G+TQ V + + A FE
Sbjct: 29  MSVLRTHTNGELTAANIGETVTLTGWVARRRDHGGVAFVDLRDREGVTQCVFH-NEADFE 87

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +R+E+VL + GLV  R     N N+ TG+IE+    +E+L+ A  LP  +    E 
Sbjct: 88  ---HLRNEYVLRVTGLVTKRPEGNENPNLATGEIEVEVSAVEVLNTAAPLPFQIDEHVEV 144

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR+LDLRR    + +  R+    + R  +  + +IE  TP LT S+PEGARDF
Sbjct: 145 GEEARLRYRYLDLRRPEPARIMRLRSDANRAARNLLAEDGYIEVETPTLTRSTPEGARDF 204

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLL   G ++Y+QIA C+RDED R+DR P EF QLD+E
Sbjct: 205 LVPARLAPGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQP-EFTQLDIE 263

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SFV+Q+DI+   E ++  V+        V     R+ Y DA+ +YG+DKPDLR  + + 
Sbjct: 264 ASFVDQEDIIELGERIVEAVWNLID--VKVPRPIQRMTYKDAMEKYGSDKPDLRFGLELT 321

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
            +TE+F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+
Sbjct: 322 ELTEYFKDTTFRVFKAPY-------VGAVVMPGGASQPRRTLDAWQEWAKQRGAKGLAYV 374

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              + E G +   GPVAK++       +      + GD  FF AG+     +    AR  
Sbjct: 375 L--IQEDGEL--TGPVAKNITDAERAGLAEATGAKPGDCIFFAAGEAKASRALLGAARVE 430

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESL 469
           I    G+I    + F W++D P +E + E  +  D A         H+ FT P+      
Sbjct: 431 IGHRTGLIKDGEWSFVWVVDAPMFESSAEATESGDVALGHSAWTAVHHAFTSPKPEFMDT 490

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              D  S  A+ YD+VCNG EI  G IR H  +V  + F+ +GI +E  + +FG L  AF
Sbjct: 491 FDTDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFAVMGIGEEEAQEKFGFLLDAF 550

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PP GGIA G DRIV LL G  ++REV  FP + N  D L  +P+ ++ EQ +E G+
Sbjct: 551 KYGAPPMGGIAFGWDRIVSLLAGVDSIREVIAFPKTGNGFDPLTAAPAPITPEQRKEAGV 610

Query: 590 RIVENPKK 597
                PKK
Sbjct: 611 DF--KPKK 616


>gi|23464646|ref|NP_695249.1| aspartyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|46577273|sp|Q8G863|SYD_BIFLO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|23325204|gb|AAN23885.1| aspartyl-tRNA synthetase [Bifidobacterium longum NCC2705]
          Length = 599

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/605 (38%), Positives = 346/605 (57%), Gaps = 39/605 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V L+GWV R R HGG+ F+D+RD  G+ QVV   +    ++A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVIYDE----DMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117
            +RSE+V+ I G V  R     N ++ TG+IE+ A+ IEIL+ ++ LP  V        E
Sbjct: 62  PLRSEFVIQITGEVRLRPDGNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENESE 121

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQYNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294
           LDMEM++V+Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFG 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353
           NP++   +TE+F ++ FRVF           V A+  KGG    R   D   +WAR +G 
Sbjct: 299 NPLV--ELTEYFKNTPFRVFQAPY-------VGAVVFKGGAATPRRQFDAWQDWARQRGA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAY+     E+G +   GPVAK+L+      +R  +  ++GD+ FF AG         
Sbjct: 350 KGLAYVV--FGENGELK--GPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESAQLLL 405

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464
              R  +A   G+++   F F W++DFP ++  ++    D A         H+PFTMP  
Sbjct: 406 GAVRVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D     +  YD+VCNG E+  G +R H  ++  +    +GI+KE  + +FG 
Sbjct: 466 DWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGF 525

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPH G+A G DR V +L GA ++R+V  FP +    D L G+P+ +S EQ 
Sbjct: 526 LLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585

Query: 585 RELGL 589
            E G+
Sbjct: 586 AETGV 590


>gi|240143875|ref|ZP_04742476.1| aspartate--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257204136|gb|EEV02421.1| aspartate--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291535084|emb|CBL08196.1| aspartyl-tRNA synthetase [Roseburia intestinalis M50/1]
 gi|291539597|emb|CBL12708.1| aspartyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 597

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 228/584 (39%), Positives = 346/584 (59%), Gaps = 13/584 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
           +R+H C ++   ++G  V + GWV + R  G +IF+D+RD  GI Q+V N +S     +E
Sbjct: 9   HRSHRCTEVSNQNIGETVTVMGWVQKRRNLGSLIFIDLRDRSGILQLVFNEESVGKEGYE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ + G V  RSA  +N ++ TG IE+ A  I ILS AE  P  +    + 
Sbjct: 69  KAERLRSEYVIAVTGKVEKRSA-AVNESLKTGDIEVIATDIRILSEAETPPFQIEENSQT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + KN++ R+++   MR  M  E F+E  TP+L  S+PEGARD+
Sbjct: 128 KDEVRLKYRYLDLRRPDIQKNLMLRSKVAYLMRDFMAKEGFLEIETPMLCKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ YKQLLM SG+DRYFQIA CFRDED R+DR P EF Q DME
Sbjct: 188 LVPSRVHPGHFYALPQSPQLYKQLLMCSGYDRYFQIARCFRDEDLRADRQP-EFTQADME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           ++FV+ +D+L+  E +L+ +F+E + G  V+    R+ + +A+ R+G+DKPD R  + + 
Sbjct: 247 LAFVDVEDVLDVNERLLKYIFKE-AIGVDVTLPLPRMPWQEAMDRFGSDKPDTRFGMELC 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           +V++      F VF+  L    G  V  I AKG  G  R   D++ E+A+  G  GLAY+
Sbjct: 306 DVSKVVEGCGFSVFTGAL--ENGGSVRGINAKGQAGMPRKKIDKLVEFAKGYGAKGLAYL 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              ++E G        AK +     +A+   +  + GD   F A       +     R  
Sbjct: 364 --AVNEDGTYK--SSFAKFMTEDELKALVSAMQGEPGDLLLFAADKNKIVWNVLGALRLE 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +++ N + F W+ +FP  EW++EE +    H+PFTMP         +D  S++A
Sbjct: 420 LAKELDLLDPNQYNFLWVTEFPLLEWSDEENRFMAMHHPFTMPMEEDWDKIDSDPGSVRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G +R H  ++  + F  +G +KE    +FG L  AF+ G+PPH G+
Sbjct: 480 KAYDIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKERAHEQFGFLLDAFKYGVPPHAGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
           A G+DR+VM ++ A ++R+V  FP  ++   L+  +P  V  +Q
Sbjct: 540 AYGLDRLVMHMVHADSIRDVIAFPKVKDASCLMTQAPGIVDKKQ 583


>gi|238756964|ref|ZP_04618152.1| Aspartyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238704794|gb|EEP97323.1| Aspartyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 598

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/593 (39%), Positives = 350/593 (59%), Gaps = 15/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD +A ++ A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQNAAYKQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQIAGTVRARPDSQINKDMSTGEVEIFANTLNIINRSE--PLPLDSNQINSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V A+   GG    R   D   ++    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQVTRKQIDEYGQFVSIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
            D +  V G+  P+AK L+    EAI  R   + GD  FF A D  K  + A  A R  +
Sbjct: 356 -DRAAGVEGVQSPIAKFLSADVLEAILARTQAESGDILFFGA-DSYKVVTDAMGALRLKV 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
            ++L + + N +   W++DFP +E ++ E  +   H+PFT P+    E L      +I A
Sbjct: 414 GRDLALTHLNTWAPLWVVDFPMFE-DDSEGGLSAMHHPFTAPKDMSPEQLAAAPTTAI-A 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H +E+  Q F  +GI++     +FG L  A + G PPH G+
Sbjct: 472 NAYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKFGTPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V
Sbjct: 532 AFGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584


>gi|238792579|ref|ZP_04636212.1| Aspartyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238728214|gb|EEQ19735.1| Aspartyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 598

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 236/593 (39%), Positives = 348/593 (58%), Gaps = 15/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A FE A 
Sbjct: 2   RTEYCGQLNLSHVGQSVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAFEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANALNIINRSE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKSRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V A+   GG    R   D   ++    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQVTRKQIDEYGQFVSIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
            D +  V G+  P+AK L+    EAI VR   + GD  FF A D  K  + A  A R  +
Sbjct: 356 -DRAAGVEGVQSPIAKFLSAEVLEAILVRAQAESGDILFFGA-DSNKIVTDAMGALRLKV 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
            ++L +     +   W++DFP +E ++ E  +   H+PFT P+    E L      +I A
Sbjct: 414 GRDLELTKLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKEMSPEQLAAAPTTAI-A 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H +E+  Q F  +GI++     +FG L  A + G PPH G+
Sbjct: 472 NAYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V
Sbjct: 532 AFGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584


>gi|293400601|ref|ZP_06644746.1| aspartate--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305627|gb|EFE46871.1| aspartate--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 581

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/590 (37%), Positives = 342/590 (57%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L +SD G  V L GWV + R  G ++F+D+RD  GITQ+V   D    E  K 
Sbjct: 3   RTHTNGELRLSDTGKEVTLLGWVAKRRNFGALVFIDLRDRTGITQLVF--DETLAEQIKD 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E++L + G V+ R  +  N  + TG IE+   ++ I++ AE  P+ V  + +  E  
Sbjct: 61  VRNEYILQVSGTVLERKDK--NPKLATGDIEVKVNEVSIINSAETTPIIVADDTDALEDT 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  +   ++ R +I +SMR  + +++FIE  TP+L  S+PEGARD+LVPS
Sbjct: 119 RLKYRYLDLRRPIMQNKLMMRHKITHSMREYLDSKDFIEIETPMLGRSTPEGARDYLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ GSFYALPQ+PQ YKQLLM SGF+RY+Q A CFRDED R+DR   +F Q+D+E SF+
Sbjct: 179 RVHPGSFYALPQSPQLYKQLLMVSGFERYYQFARCFRDEDLRADR-QTDFTQVDLETSFL 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              +I   ME +L+ + ++   G  +S  F R+ +++A+ RYG+DKPD R  + + ++TE
Sbjct: 238 SDVEIQTMMEEMLQKLMKDV-KGMDISIPFPRLTWEEAMNRYGSDKPDNRFAMELQDITE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F +  F+VF   ++     +   +P K     R   D++ E A+  G  GL  + +   
Sbjct: 297 LFTNCGFKVFQDCIANAGSIKAVVVPDK-ASMTRKEIDKITELAKKNGAKGLVTLKYL-- 353

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            +G V+  GP+ K L+     A+  RL +++ D    ++      C      RNH    L
Sbjct: 354 -NGEVS--GPIVKFLSEDEIHALIERLTLKENDLVLIVSDKWRITCEVLGALRNHFGSLL 410

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G+   + F + W+ DFP +E++EE+ +    H+PFT P+         D   + A  YD+
Sbjct: 411 GLKKKDEFSYLWVTDFPMFEYSEEDGRWYAMHHPFTRPRDEDMQYIDTDPGKVHAIAYDV 470

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG+E+  G +R +   +  + F  +G ++E ++  FG    A + G PPHGG+A G+D
Sbjct: 471 VLNGYELGGGSLRIYDGAMQDKMFEVLGFTEEKIQENFGWFVDALKYGTPPHGGLAFGLD 530

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           RI M+L  + ++R+V  FP + N    +  +P+ V  EQL+EL + I E 
Sbjct: 531 RIAMILSESDSIRDVIAFPKNANAKCPMSDAPTPVDEEQLQELHITITEK 580


>gi|227893459|ref|ZP_04011264.1| aspartate--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227864738|gb|EEJ72159.1| aspartate--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 617

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 228/595 (38%), Positives = 344/595 (57%), Gaps = 23/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +G  V L GWV RVR  G ++F+D+RD  G+ Q+V N DS     +IA
Sbjct: 7   RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKELMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E+VL + G V+ RS   +N ++ TGQ+E+ A  I +L+ A+  P  +    E  E
Sbjct: 67  DSLGNEYVLQVKGKVVKRS--EVNPDMKTGQVEVDATDIIVLNKAKNPPFEIKNGVEISE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +++ I    E +L+ + ++   G  +     RI + D++ +YG DKPD R  +++H++
Sbjct: 244 FADEETIQGYTEGLLKKIMKDV-KGIDLKTPIKRITWTDSMNKYGCDKPDTRYGMLIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS   ++  G  V  I  K G    +R   D+  ++ +     GLA++ 
Sbjct: 303 SPIFKDSDFKVFSG--AIAGGGFVKGIAVKNGAKAYSRKKIDKKADYIKRFHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E G  +  GPVA+ L   N  A++   D++ G+   FIA D  K C    D+ NH+
Sbjct: 361 F---EDGEFS--GPVARFLTDENKAALKKEFDLEGGELVVFIA-DKWKVC---CDSLNHL 411

Query: 421 ----AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
               A E GII    ++F W++D+P +E++E   +   AH+PFTMP      L   +   
Sbjct: 412 RREFAHETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHK 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG E+  G IR H   +    F  +G +K+    +FG L  A   G PPH
Sbjct: 472 AHARSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR  M+L    N+R+V  FP + +  + +M +P+ V+ +QL +LG+ +
Sbjct: 532 AGLAIGLDRFAMMLADKDNIRDVLAFPKNASASEPMMHAPAPVADQQLNDLGIEV 586


>gi|241760783|ref|ZP_04758874.1| aspartate--tRNA ligase [Neisseria flavescens SK114]
 gi|241318680|gb|EER55232.1| aspartate--tRNA ligase [Neisseria flavescens SK114]
          Length = 602

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 234/598 (39%), Positives = 351/598 (58%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFATAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +     F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFQDALGVDL--GVFPRMPYAEAMFYYGSDKPDIRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++  N++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVSNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGA-DKAKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++E+  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGAENGYFVDEWKPLWVVDFPMFEYDEDGDRWAAMHHPFTSPKPGHEDLMASD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PENCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDEKQLRELSLRL 592


>gi|307728452|ref|YP_003905676.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307582987|gb|ADN56385.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 599

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 239/593 (40%), Positives = 341/593 (57%), Gaps = 10/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F+ A+
Sbjct: 4   RSEYCGLVTEELLGQTVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L I G+V SR   T NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCLQIKGVVRSRPEGTTNAALKSGKIEVLCHELIVLNASITPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDTLGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+E + G  +   F  + Y +A+RR+G+DKPDLR  +   ++T
Sbjct: 242 LSEQEIRDLFEAMIRHVFKE-TIGVELDAKFPVMEYSEAMRRFGSDKPDLRVKLEFTDLT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DVVKDVEFKVFSTPANSKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422
              G      P+ K+L+    +AI  R   QDGD  FF A D  K  + +  A R  I  
Sbjct: 361 VAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            E G  N    + ++  W++DFP +E++EE+ +   AH+PFT P+        +D     
Sbjct: 420 SEFGKANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLESDPARCL 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R H  EV  + F  + I+ E  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSEVDERQLRELHIRL 592


>gi|238751587|ref|ZP_04613077.1| Aspartyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238710149|gb|EEQ02377.1| Aspartyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 598

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 232/592 (39%), Positives = 344/592 (58%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGIDL--GDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V A+   GG    R   D   ++    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQLTRKIIDEYGQFVSIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK L+    +AI  R   + GD  FF A D  K  + A  A R  + 
Sbjct: 356 DRAAGMEGVQSPIAKFLSAEVLDAILTRTQAESGDILFFGA-DSYKIVTDAMGALRLKVG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++L +     +   W++DFP +E ++ E  +   H+PFT P+    E L      +I A 
Sbjct: 415 RDLQLTQLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKDMSPEQLAAAPTTAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+  Q F  +GI++     +FG L  A + G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V
Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584


>gi|157371021|ref|YP_001479010.1| aspartyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166979993|sp|A8GFJ2|SYD_SERP5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157322785|gb|ABV41882.1| aspartyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 593

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 237/594 (39%), Positives = 347/594 (58%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A F+ A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQKAAFDKAY 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  +EI++ +E  PLP+   +   E 
Sbjct: 62  DLRNEFCIQIVGTVRARPDSQINKDMATGEVEVFAHALEIINRSE--PLPLDSNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME + R ++ +  N +    +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREVMEKLARELWLDVKNVDL--GDFPIMTFEEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V AI   GG    R   D    +    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAAICVPGGAQLTRKLIDEYGAFVNIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK L+    EAI  R + Q GD  FF A D  K  + A  A R  + 
Sbjct: 356 DRAAGMEGVQSPIAKFLSAEVLEAILARTNAQSGDILFFGA-DSFKIVTDAMGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++L +   + +   W++DFP +E  + E  +   H+PFT P+    E L G    +I A 
Sbjct: 415 RDLELTKLDSWAPLWVVDFPMFE-EDGEGGLAAMHHPFTAPRDMSPEELAGTPTNAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H SE+    FS +GI++     +FG L  A + G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHRSEMQQTVFSILGINEHEQREKFGFLLDALKYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V+ 
Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLQELAICVVKK 586


>gi|15639969|ref|NP_219422.1| aspartyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189026208|ref|YP_001933980.1| aspartyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094395|sp|O83950|SYD_TREPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238689353|sp|B2S4M2|SYD_TREPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3323310|gb|AAC65942.1| aspartyl-tRNA synthetase (aspS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018783|gb|ACD71401.1| aspartyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|291060342|gb|ADD73077.1| aspartyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 602

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 232/590 (39%), Positives = 333/590 (56%), Gaps = 11/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT +CG+L    VG+ V L+GWVHR R HG + F ++RD  GI QV+ + +  ++ +   
Sbjct: 19  RTIACGELRRCHVGTVVVLNGWVHRKRSHGTVSFFNMRDRSGIVQVIVSQEENASLWSTV 78

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R E  L ++G+V  R    IN  + TG++E+ A+ + +LS    LP  V       E
Sbjct: 79  NRIRLECCLAVEGVVRERPPSMINRALHTGEVEVHARTLYVLSENAVLPFRVDDVVHAHE 138

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLR   + + I  R+R+  ++R  +  + FIE  TP    S+PEGARDF+V
Sbjct: 139 DIRLKYRYLDLRSQRMQERIALRSRVALAIRQFLSMKGFIEIETPTFICSTPEGARDFVV 198

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ YKQLLM +GFDRYFQ+A C+RDED R DR P EF Q+D+EMS
Sbjct: 199 PSRVCPGRFYALPQSPQLYKQLLMVAGFDRYFQLARCYRDEDARGDRQP-EFTQIDLEMS 257

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV +DD++   E++LR VF   S G  +   F R+ Y  A+ +YGTDKPD+R   ++ N 
Sbjct: 258 FVSRDDVMRVNEDMLRYVFRT-SIGVELPTFFPRLTYAQALDQYGTDKPDMRFKPVLQNA 316

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
               +   F  F ++++         +P K    +R   + +   AR+       ++FW 
Sbjct: 317 DFMGMLGTFTPFEEVVAQGGSIRALVLPGKARCYSRRQIEALESIARAHEA---HHLFWL 373

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G +   G +A+    V +E +R RL  QD D   F+A    + C  A  A R+ + 
Sbjct: 374 KATGGGLE--GGIARFFAGVESE-VRRRLSAQDEDLLLFVADCRHRVCCVALGAVRSALI 430

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++        F F WI+DFP +EWN  E K D AH+ F+ PQ         D  S+K   
Sbjct: 431 RDESFPEKELFSFVWIVDFPLFEWNPAENKWDPAHHMFSAPQEQYLETLEQDPGSVKGDL 490

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+ASG IR H +++  + F  VG+  E    +FG L  AF+ G PPHGGIA 
Sbjct: 491 YDLVLNGYELASGSIRIHDTQLQKRIFKIVGLDPEEAGEKFGFLTEAFKYGAPPHGGIAH 550

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VML+ G++++R+V  FP +      L   PS +   QL EL L +
Sbjct: 551 GLDRLVMLMTGSESIRDVIAFPKNTLAASPLDNCPSVLDKRQLDELHLTV 600


>gi|86140819|ref|ZP_01059378.1| aspartyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85832761|gb|EAQ51210.1| aspartyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 582

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 222/593 (37%), Positives = 339/593 (57%), Gaps = 17/593 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           YRTH+ G L    +   V L+GWV + R  G +I++D+RD YGITQ++ + +    A  +
Sbjct: 2   YRTHNNGALRAEHINETVTLAGWVQKSRDKGFMIWVDLRDRYGITQLIFDEERTPKAVMD 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +AK++  E+V+ + G V+ R  E+ N  + TG +EL  +K+EIL+ A+  P  +    + 
Sbjct: 62  LAKTMGREFVIQVTGKVIER--ESKNPKMPTGDVELLVEKLEILNEAKTPPFTIEDATDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR+ + + ++ R ++  ++R  +  + FIE  TP L  S+PEGARDF
Sbjct: 120 GEDLRMKYRYLDIRRNPVKEKLIFRHKVSIAVRNYLSEQGFIEVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DILN  E + + + +E       S  F R+ YD+A+ +YG DKPD+R  +   
Sbjct: 239 MAFVEQEDILNIFEGLTKHLLKEVVGFEIES--FPRMTYDEAMAKYGNDKPDIRFGMEFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
            +     H +F+VF      N    V  I   GG    R   D++ +W +      L  +
Sbjct: 297 ELNAVAQHKDFKVF------NSAELVVGIAVPGGASYTRKEIDKLIDWVKRPQVGALGMV 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + + +E G+      V K  +  +          Q GD    ++G+  K  +  +  R  
Sbjct: 351 YVKCNEDGSFK--SSVDKFYDQEDLAKWAEATGAQPGDLICVLSGETSKTRAQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A +LG+   + F   W++DFP  EW+EE ++    H+PFT P+ G   L       +KA
Sbjct: 409 LATQLGLRKSDEFAPLWVVDFPLLEWDEETERYHAMHHPFTSPKPGQMELLDTKPGEVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H  E+  + F  +G +KE  + +FG L  AFQ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKEIQSKMFDYLGFTKEEAQAQFGFLMDAFQYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+V +L G + +R+   FP +    D+++ +P+T+   QL EL L++ 
Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNAGRDVMIDAPATIDAAQLEELNLKVT 581


>gi|116513951|ref|YP_812857.1| aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|313123581|ref|YP_004033840.1| aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|116093266|gb|ABJ58419.1| aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|312280144|gb|ADQ60863.1| Aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|325125612|gb|ADY84942.1| Aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 614

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 227/598 (37%), Positives = 347/598 (58%), Gaps = 17/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +   V L GWV RVR  G +IF+D+RD  GI QVV N DS     ++A
Sbjct: 7   RTDYCGNITSQYLDQDVLLYGWVQRVRNLGQLIFIDLRDREGIVQVVVNHDSGQELMDVA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+  E+V+ + G V  RS++  N ++ TG +E+ A +I +L+ A+  P  +  +    E
Sbjct: 67  SSLGQEYVVEVKGHVNERSSK--NPDMKTGDVEVIASEITVLNKAKTPPFEIKDDLVASE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR TL   ++ R +I+ +    +  E FI   TP L  S+PEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPTLQNALIMRAQIMTATNAYLSGEGFINIETPDLGKSTPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA CFRDED R DR P EF Q+D+E S
Sbjct: 185 PSRVYPGSFYALPQSPQIFKQLLMGAGFDKYYQIARCFRDEDLRGDRQP-EFTQIDLETS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++ +    E +L  V ++   G  +     RI + +++ +YG DKPD R  +++H++
Sbjct: 244 FMDEEGVQEVTEGLLAKVMKDV-KGIDLQLPLPRITWQESMDKYGCDKPDTRYEMLIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
              F  S F+VF+  L  N G+ V  I  KGG    +R   + M ++ +     GLA++ 
Sbjct: 303 GNVFAKSGFKVFASALE-NGGF-VRGIAVKGGAKFYSRKKIEAMQDYIKRYHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E G+ +  GPV++ L+      +     ++ G+   FIA D  K C  + D  R  
Sbjct: 361 Y---EDGDFS--GPVSRFLSEEEKAGLVQEFSLEGGELLLFIA-DQWKVCCDSLDYLRRQ 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GII  + +++ W++D+P +E++E +++   AH+PFTMP      L   D     A
Sbjct: 415 TAKETGIIPKDTYKYLWVVDWPLFEYDEGDERWIAAHHPFTMPDDKGIELLETDPHKAHA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  ++  + F  +G +KE    +FG L  A   G PPH G+
Sbjct: 475 RSYDIVLNGYELGGGSIRIHKRDIQEKMFKALGFTKERAYEQFGFLMDALDMGFPPHAGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR  MLL G  N+R+V  FP + +  + +M +P+ V+ +QL +LG+ + E  K+
Sbjct: 535 AIGLDRFAMLLAGKDNIRDVIAFPKNASASEPMMHAPAPVADQQLTDLGIEVAEAAKE 592


>gi|104773943|ref|YP_618923.1| aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|103423024|emb|CAI97710.1| Aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 614

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 227/598 (37%), Positives = 347/598 (58%), Gaps = 17/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +   V L GWV RVR  G +IF+D+RD  GI QVV N DS     ++A
Sbjct: 7   RTDYCGNITSQYLDQDVLLYGWVQRVRNLGQLIFIDLRDREGIVQVVVNHDSGQELMDVA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+  E+V+ + G V  RS++  N ++ TG +E+ A +I +L+ A+  P  +  +    E
Sbjct: 67  SSLGQEYVVEVKGHVNERSSK--NPDMKTGDVEVIASEITVLNKAKTPPFEIKDDLVASE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR TL   ++ R +I+ +    +  E FI   TP L  S+PEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPTLQNALIMRAQIMTATNAYLSGEGFINIETPDLGKSTPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA CFRDED R DR P EF Q+D+E S
Sbjct: 185 PSRVYPGSFYALPQSPQIFKQLLMGAGFDKYYQIARCFRDEDLRGDRQP-EFTQIDLETS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++ +    E +L  V ++   G  +     RI + +++ +YG DKPD R  +++H++
Sbjct: 244 FMDEEGVQEVTEGLLAKVMKDV-KGIDLQLPLPRITWQESMDKYGCDKPDTRYEMLIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
              F  S F+VF+  L  N G+ V  I  KGG    +R   + M ++ +     GLA++ 
Sbjct: 303 GNVFAKSGFKVFASALE-NGGF-VRGIAVKGGAKFYSRKKIEAMQDYIKRYHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E G+ +  GPV++ L+      +     ++ G+   FIA D  K C  + D  R  
Sbjct: 361 Y---EDGDFS--GPVSRFLSEEEKAGLVQEFSLEGGELLLFIA-DQWKVCCDSLDYLRRQ 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GII  + +++ W++D+P +E++E +++   AH+PFTMP      L   D     A
Sbjct: 415 TAKETGIIPKDTYKYLWVVDWPLFEYDEGDERWIAAHHPFTMPDDKGIELLETDPHKAHA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  ++  + F  +G +KE    +FG L  A   G PPH G+
Sbjct: 475 RSYDIVLNGYELGGGSIRIHKRDIQEKMFKALGFTKERAYEQFGFLMDALDMGFPPHAGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR  MLL G  N+R+V  FP + +  + +M +P+ V+ +QL +LG+ + E  K+
Sbjct: 535 AIGLDRFAMLLAGKDNIRDVIAFPKNASASEPMMHAPAPVADQQLTDLGIEVAEAAKE 592


>gi|168334873|ref|ZP_02692995.1| aspartyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 687

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/588 (39%), Positives = 351/588 (59%), Gaps = 13/588 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG++  S++ S V++ GWV+  R  GGIIF+D+ D  G  Q+V + +     F+I 
Sbjct: 3   RTHYCGNIRESNMKSSVKVCGWVNTKRDMGGIIFIDLHDREGTLQIVCDLEMLKDKFKII 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++V+++ VL + G +  R  ETIN  I TG +EL A+   +LS A   PLP   + E  E
Sbjct: 63  EAVKNQSVLQVRGKIRLRDDETINPKIATGTVELYAEDCRLLSEAS--PLPFSLDEEVRE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLD+RR+ +  N+  R +I    +  +  + FI   TP+LT S+PEGARD+LV
Sbjct: 121 DLRLKYRFLDIRREAMISNLKFRHKIQKLTQDYLDNDGFISVETPMLTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  G D+Y+QIA CFRDED R+DR P EF Q+DMEMS
Sbjct: 181 PSRVHPGEFYALPQSPQIFKQLLMVGGLDKYYQIARCFRDEDLRADRQP-EFTQVDMEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQ+D+L  +E + + +F+   N     + F RI +  A+ +YG+DKPDLR  + + ++
Sbjct: 240 FVEQEDVLRHLEKLFKYIFKHSMNIE-FDDRFPRITWKTAMDKYGSDKPDLRFDLPIVDI 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           TE     EF VF  +  V+ G  V AI  KGG   +R+  D + + A + G  G+A+I  
Sbjct: 299 TEVARVCEFSVFRNV--VDQGGVVRAICIKGGDVLSRSQIDELTKTAVTFGAKGMAWISL 356

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R D  G +  +  + K+ N  + +AI  + + ++GD   F A             R  IA
Sbjct: 357 RPD--GEIYSI--LKKYFNESDIQAIIEKTEAKNGDFILFCADKLDIVRKVLGVLRLEIA 412

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
               +   + ++  ++ DFP +E++EEE +    H+PFTMP     SL   D  +++A  
Sbjct: 413 DIFNLRRKDDYKILFVTDFPQFEYSEEEGRYLAMHHPFTMPYLEDISLIETDKGAVRAQA 472

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+ SG +R + +++  + F  +G S E ++ RFG +  AF+ G PPH G A 
Sbjct: 473 YDVVLNGVELGSGSVRIYDADIQQKMFXALGFSDEEIKERFGFMVDAFKYGTPPHAGFAF 532

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           G+DR+VMLL+GA ++REV  FP +++   L+  +P+ V  EQL  L L
Sbjct: 533 GLDRLVMLLVGANSLREVIAFPKTKDASCLMTNAPNLVDDEQLEVLNL 580


>gi|300856529|ref|YP_003781513.1| aspartyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300436644|gb|ADK16411.1| aspartyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 590

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/592 (38%), Positives = 349/592 (58%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RT+ CG+L  S++G  + + GWV R R  GG+IF+D+RD  GI Q+V     +   FE +
Sbjct: 10  RTNMCGELRESNIGEKITVMGWVQRKRNLGGLIFVDLRDRTGILQIVFGEKINKEAFEKS 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +V+SE+ +   G ++ R  E+ N  I TG +E+  + I+I S ++  P+ +    +  E
Sbjct: 70  DNVKSEYCIAATGTIVKR--ESPNTEIPTGMVEVKGEYIKIFSESQTPPIYIKENLDAAE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR  + + ++ R +    +R  +  E F+E  TP+L  S+PEGARD+LV
Sbjct: 128 NIRLKYRYLDLRRPDMQRILMTRHKTAKVVRDFLDEEGFLEIETPMLGKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FYALPQ+PQ +KQLLM SG+DRYFQI  CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYNGKFYALPQSPQLFKQLLMVSGYDRYFQIVKCFRDEDLRANRQP-EFTQIDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDD++N  E  ++ VF++  N + V     R+ Y  A+ +YG+DKPDLR  + ++++
Sbjct: 247 FVEQDDVINLNERFIQRVFKKILNVD-VKLPIERMPYKIAMEKYGSDKPDLRFGMEINDI 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E   + +F+VF   +          +P     G R   D++ E+ +  G  GL +I ++
Sbjct: 306 SEVVKNIDFKVFQSAIEAGGSVRAIKVPNSAKMG-RKQIDKLVEFVKDYGAKGLVWIAYK 364

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIA 421
            D          ++K L   +T+ I  +L+   GD    +A  + + F S  A  R H+A
Sbjct: 365 ED-----GIKSSISKFLTEEDTKNILNKLEAVPGDLILVVADKNKVVFESLGA-LRVHMA 418

Query: 422 QELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           +E GI++ N  F F W+ +FP   +NE+E++    H+PFT P         +D   ++A 
Sbjct: 419 KETGILDGNDEFRFVWVTEFPLLSYNEDEQRYQAEHHPFTAPMDEDIQYLESDPGRVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  +GIS+E    +FG L  AF+ G PPHGG+A
Sbjct: 479 AYDIVLNGEELGGGSIRIHDTKLQERMFKVIGISQENAWEKFGYLLEAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRI 591
            G DR+VM L    N+++V  FP +QN FC  L  +P+ V   QL+ELG+ I
Sbjct: 539 YGFDRMVMFLAKTDNIKDVIAFPKNQNAFCP-LTEAPNVVDESQLKELGISI 589


>gi|270296725|ref|ZP_06202924.1| aspartyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270272712|gb|EFA18575.1| aspartyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 585

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/592 (38%), Positives = 346/592 (58%), Gaps = 16/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           YR+H+CG+L +SDV   V L+GWV R R  GG+ F+D+RD YGITQ+V N +  +   E 
Sbjct: 2   YRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  R ++  N +I TG IE+   ++++L+ +   P  +    +  
Sbjct: 62  ANRLGREFVIQVKGTVNERFSK--NQHIPTGDIEIIVSELDVLNSSLTPPFTIEENTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  +  N+  R ++   +R  + ++ FIE  TPIL  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQDD++N  E + + +F+E   G  ++  F+R+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQDDVINLFEGMAKYLFKEI-RGVEMNEPFMRMPWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDIMKGHGFPVFD-----NAAY-IGGICAEGAAHYTRKQLDALTEFVKRPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  GNV     V K       + ++   + + GD    ++G D +K      + R  
Sbjct: 352 ARVEADGNVK--SSVDKFYAQEVLQEMKAAFNAKPGDLILILSGDDAMKTRKQLNELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW++EE ++   H+PFT P+     L   D  +++A
Sbjct: 410 MGNQLGLRDKNKFVCLWVVDFPMFEWSDEEGRLMAMHHPFTHPKDEDIPLLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+VCNG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAQEQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL L +
Sbjct: 530 AYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQKQLDELNLTV 581


>gi|161507425|ref|YP_001577379.1| aspartyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|160348414|gb|ABX27088.1| Aspartyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 617

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/595 (38%), Positives = 345/595 (57%), Gaps = 23/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +G  V L GWV RVR  G ++F+D+RD  GI Q+V N DS     +IA
Sbjct: 7   RTDYCGNITEKYIGENVNLYGWVQRVRNLGNLVFIDLRDRAGIVQIVVNKDSGKKLMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E+VL + G V+ RS   +N ++ TGQ+E+ A  I +L+ A+  P  +    E  E
Sbjct: 67  DSLGNEYVLQVKGKVVKRS--EVNPDMKTGQVEVDATDIIVLNKAKNPPFEIKNGVEISE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F ++  I +  E +L+ + ++   G  +     RI + D++ +YG DKPD R  +++H++
Sbjct: 244 FADEKTIQDYTEGLLKKIMKDV-KGIDLKTPIKRISWTDSMNKYGCDKPDTRYGMLIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS   ++  G  V  I  K G    +R   D+  E+ +     GLA++ 
Sbjct: 303 SPIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKVYSRKKIDQKAEFIKRFHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E G  +  GPVA+ L   N EA++   D++ G+   FIA D  K C    D+ NH+
Sbjct: 361 F---EDGEFS--GPVARFLADENKEALKKEFDLEGGELVVFIA-DKWKVC---CDSLNHL 411

Query: 421 ----AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
               A+E  II    ++F W++D+P +E++E   +   AH+PFTMP      L   +   
Sbjct: 412 RREFAKETDIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHK 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG E+  G IR H   +    F  +G +++    +FG L  A   G PPH
Sbjct: 472 AHARSYDIVMNGDEMGGGSIRIHKRSIQEDMFKALGFTEKRAYEQFGYLLDALDMGFPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR  M+L    N+R+V  FP + +  + +M +P+ V+ +QL +LG+ +
Sbjct: 532 AGLAIGLDRFAMMLADKDNIRDVLAFPKNASASEPMMHAPAPVADQQLNDLGIEV 586


>gi|319795424|ref|YP_004157064.1| aspartyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315597887|gb|ADU38953.1| aspartyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 602

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/602 (39%), Positives = 351/602 (58%), Gaps = 16/602 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD A  F +A+
Sbjct: 4   RTHYCGLVTEALLGQTVTLCGWVNRRRDHGGVIFIDVRDREGYVQVVCDPDRASTFAVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + I GLV SR   T N ++ +G+IE+   ++++L+ +   P  +  +    E+
Sbjct: 64  NLRNEFCVQITGLVRSRPEGTTNDSLKSGKIEVLCHELKVLNPSVTPPF-LLDDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + +N++ R ++    R  + A  FI+  TP+L  S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPAMQRNMMLRYKVTMETRKFLDANGFIDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ GSF+ALPQ+PQ +KQLLM +G+DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRVHDGSFFALPQSPQLFKQLLMVAGYDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    E ++R VF   +  +     F  + Y DA+ +YG+DKPDLR  +    +T
Sbjct: 242 LAEEEIREMFEGMIRNVFRNAAGIDLPV--FPTMTYGDAMFKYGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEV-WAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           E     EF+VFS   +   G  V   +P  GG G  +R   D   E+ +  G  GLAYI 
Sbjct: 300 ELMKRVEFKVFSNAATQKDGRVVALRVPGGGGEGGLSRGEIDAYQEFVKIYGAKGLAYIK 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA---- 416
                +G      P+ K+L+      I  R   ++GD  FF A D  K  + A  A    
Sbjct: 360 VNDAAAGREGLQSPIVKNLDDNTLAEIIARTGARNGDILFFGA-DKEKVVNDAIGALRVK 418

Query: 417 --RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
              +   ++ G+ + + +   W++DFP +E++EE ++    H+PFT P+ G E L     
Sbjct: 419 IGHSAFGKKSGLFD-DRWAPLWVVDFPMFEFDEEGQRWSAVHHPFTAPKDGHEDLMDTAP 477

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               A  YD+V NG E+  G +R H  EV  + F  + IS E  + +FG L  A Q G P
Sbjct: 478 EKCIAKAYDMVLNGIEMGGGSVRIHREEVQSKVFRALKISAEDAQLKFGFLLDALQYGAP 537

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VML+ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +++   
Sbjct: 538 PHGGIAIGLDRLVMLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIKLRNT 597

Query: 595 PK 596
           P+
Sbjct: 598 PQ 599


>gi|323524741|ref|YP_004226894.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323381743|gb|ADX53834.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 599

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 238/593 (40%), Positives = 341/593 (57%), Gaps = 10/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F+ A+
Sbjct: 4   RSEYCGLVTEELLGQTVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L I G+V SR   T NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCLQIKGVVRSRPEGTTNAALKSGKIEVLCHELIVLNASITPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDTLGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+E + G  +   F  + Y +A+RR+G+DKPDLR  +   ++T
Sbjct: 242 LSEQEIRDLFEAMIRHVFKE-TIGVELDAKFPVMEYSEAMRRFGSDKPDLRVKLEFTDLT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAVKDVDFKVFSAPANTKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422
              G      P+ K+L+    +AI  R   QDGD  FF A D  K  + +  A R  I  
Sbjct: 361 VAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            E G  N    + ++  W++DFP +E++EE+ +   AH+PFT P+        +D     
Sbjct: 420 SEFGKANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLESDPARCL 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R H  EV  + F  + I+ E  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSEVDERQLRELHIRL 592


>gi|296454587|ref|YP_003661730.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296184018|gb|ADH00900.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 599

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 234/605 (38%), Positives = 346/605 (57%), Gaps = 39/605 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V L+GWV R R HGG+ F+D+RD  G+ QVV   +    ++A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVIYDE----DMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117
            +RSE+V+ + G V  R     N ++ TG+IE+ A+ IEIL+ ++ LP  V        E
Sbjct: 62  PLRSEFVIQLTGEVRLRPDGNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENESE 121

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294
           LDMEM++V+Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFG 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353
           NP++   +TE+F ++ FRVF           V A+  KGG    R   D   +WAR +G 
Sbjct: 299 NPLV--ELTEYFKNTPFRVFQAPY-------VGAVVFKGGAATPRRQFDAWQDWARQRGA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAY+     E+G +   GPVAK+L+      +R  +  ++GD+ FF AG         
Sbjct: 350 KGLAYVV--FGENGELK--GPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESAQLLL 405

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464
              R  +A   G+++   F F W++DFP ++  ++    D A         H+PFTMP  
Sbjct: 406 GAVRVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D     +  YD+VCNG E+  G +R H  ++  +    +GI+KE  + +FG 
Sbjct: 466 DWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGF 525

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPH G+A G DR V +L GA ++R+V  FP +    D L G+P+ +S EQ 
Sbjct: 526 LLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585

Query: 585 RELGL 589
            E G+
Sbjct: 586 AETGV 590


>gi|242239588|ref|YP_002987769.1| aspartyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242131645|gb|ACS85947.1| aspartyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 601

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 237/595 (39%), Positives = 345/595 (57%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F +A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFTLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R    IN ++ TG++E+ A  + I++ AE  PLP+   +   E 
Sbjct: 62  ELRNEFCIQLTGTVRARPDSQINKDMATGEVEVFASALSIINRAE--PLPLDSNQNNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R RI + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRARITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E  NG  +  +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLVRELWLEI-NGVDLG-DFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V AI   GGG  +R   D   ++    G  GLAYI   
Sbjct: 297 DLLNDVDFKVFSGPAN-DPKGRVAAIRVPGGGQLSRKQIDEYAKFIEIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK L+     A+  R   QDGD  FF A D  K  + A  A R  + 
Sbjct: 356 EKAKGLEGVQSPVAKFLSEAVLAALLDRTAAQDGDILFFGA-DSAKVVTDALGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L I N N ++  W++DFP +E ++ E  +   H+PFT P+    S    +  +  A  
Sbjct: 415 RDLKITNENSWQPLWVIDFPMFE-DDGEGGLAAMHHPFTAPRDMAPSELAANPTAAIANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+    F  +GI +     +FG L  A + G PPH G+A 
Sbjct: 474 YDMVLNGYEVGGGSVRIHHGEMQQTVFRILGIDEHQQREKFGFLLDALKFGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V   K
Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALEELSIAVVGKGK 588


>gi|199599330|ref|ZP_03212728.1| Aspartyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|258508556|ref|YP_003171307.1| aspartyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|199589769|gb|EDY97877.1| Aspartyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|257148483|emb|CAR87456.1| Aspartyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259649863|dbj|BAI42025.1| aspartyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 601

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/591 (38%), Positives = 332/591 (56%), Gaps = 15/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT   GD+    +   V L GWV + R  G +IF+D+RD  GI Q+V +   D     +A
Sbjct: 4   RTCYAGDVNTDYLDQEVTLKGWVQKRRSLGSLIFIDLRDREGIVQLVFSEAIDRDALTVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVRSE+V+ + G+V  R  + +N  + TG IE+    I IL+ A+  P  +       E
Sbjct: 64  NSVRSEYVVEVQGVVKKRKPQAVNPEMKTGDIEVEVHDITILNKAKTPPFYIEDNVAVTE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             + KYR+LDLRR  + KNI  R  I+ S+   +    FI+  TP LTAS+PEGARD+LV
Sbjct: 124 ETKLKYRYLDLRRPEMQKNIFTRAHIMRSVHHYLDDNGFIDVETPTLTASTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGSFYALPQSPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I +  E ++  V  +   G  V   F RI + +A+ +YG+DKPDLR  + + +V
Sbjct: 243 FLSAEEIQDITEGLIAQVMHDV-KGIDVDLPFQRITWQEAMDKYGSDKPDLRFDMQIQDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++    S+F+VF+   +V  G +V AI   GG    +R   D   ++ +  G  GLA++ 
Sbjct: 302 SDLVKDSDFKVFAG--AVQNGGQVRAIVLPGGAAKYSRKMIDAQQDYIKRFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ + G     GP+AK     +  A+   +    GD   F+A             R H 
Sbjct: 359 -KVTDDGI---SGPIAKFFG--DGAALTQAVGAHTGDLVLFVADKAKVVADALGYLRTHF 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +LG+I+   F FCW++D+P +E++E  ++   AH+PFTMP      L   D  +  A 
Sbjct: 413 GHDLGLIDEKEFRFCWVVDWPLFEYDEGIQRWVPAHHPFTMPNEEDVHLLDTDPHAAHAQ 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  ++  +    +G + E  +  FG L  A   G PPHGG+A
Sbjct: 473 SYDIVLNGYELGGGSIRIHNRDIQEKMLKALGFTPERAQKSFGFLLNALDYGFPPHGGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR  MLL G  N+R+V  FP +    + +  +PS V+  QL++LG+ +
Sbjct: 533 IGLDRFTMLLTGRDNIRDVIAFPKNSKASEPMTSAPSPVADIQLKDLGIEV 583


>gi|256845828|ref|ZP_05551286.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256719387|gb|EEU32942.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 592

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 233/601 (38%), Positives = 350/601 (58%), Gaps = 30/601 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+ G+L + ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLGELRLKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NLNIPTGEIEVFAKEIEILNACDTLPFQISGVDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  + G   +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFEVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P      +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKIISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L   G  +   P+AK L+    +AI  +   + GD  F +A       S     R
Sbjct: 359 YI--KLTADGITS---PIAKFLSEDEMKAIIEKTQAKTGDVIFIVADKKKVVVSALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT       S+K  DL   
Sbjct: 414 LKIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDLDKF 466

Query: 478 KAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
            A Q        YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF
Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFGFFLDAF 526

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL +
Sbjct: 527 KYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFI 586

Query: 590 R 590
           +
Sbjct: 587 K 587


>gi|161830701|ref|YP_001597402.1| aspartyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|189082094|sp|A9N999|SYD_COXBR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|161762568|gb|ABX78210.1| aspartyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 590

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 237/598 (39%), Positives = 352/598 (58%), Gaps = 15/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH    +  S +   + L GWVHR R HGG+IF+D+RD  G+ QVV NP +S  F++A+
Sbjct: 2   RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+V+ + G V  R   T+N +I +G++E++A  I +L+ ++ LP  +   +E  E 
Sbjct: 62  SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R+LDLRR  + + +  R+ II  +R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 122 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +K++LM +GFDRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 182 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ DI   ME ++R +F  F N   + + F RI YD+AI+ YGTD+PDLRNP+ + +VT
Sbjct: 241 VEEKDIQQLMETMIRHLFSTFLN-VPLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIP-AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF +  + NP   +  +   KG   +R   D   ++    G  GLAYI   
Sbjct: 300 DLMKSVEFKVFKEPAN-NPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVE 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
             ++G      P+ K L       I  R   Q GD  FF   D  K  + +  A R+ + 
Sbjct: 359 NIDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFF-GADKAKIVNESLGALRDRLC 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN--DLLSIK 478
            +L +     ++  W++DFP ++  E+       H+PFT + +   E +  N  D+LS  
Sbjct: 418 ADLNLYEGQ-WKPVWVVDFPMFD-REDVGDWQALHHPFTALQETDPEKVIANPGDVLS-- 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG EI  G IR +   +    F  +GISKE+ E +FG L  A Q G PP GG
Sbjct: 474 -RAYDMVLNGSEIGGGSIRINDIGMQYAVFKVLGISKEMAEAQFGHLLMALQFGSPPLGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR+V ++ GA ++R+V  FP +Q     L  +P+ V   QL  LGL++ ++ K
Sbjct: 533 IAFGLDRLVAIMTGASSIRDVIAFPKTQTAQCPLTNAPAQVETLQLETLGLKVSKHRK 590


>gi|255534114|ref|YP_003094486.1| aspartyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255347098|gb|ACU06424.1| aspartyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 581

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/589 (38%), Positives = 336/589 (57%), Gaps = 16/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT +CG L + ++G  V L GWV + R  GG+ F+DIRD YGITQ+V N D      E A
Sbjct: 3   RTTTCGALTIKNLGENVILCGWVQKSRDLGGMTFIDIRDRYGITQLVFNMDDNRELCEAA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++  E+V+   GLV+ RS +  N  + TG++E+    +E+L+ A+  P  +  E +  +
Sbjct: 63  RNLGREFVIKASGLVVERSNK--NLKMPTGEVEIKITALEVLNAAKLPPFLIDDETDGGD 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR+ +  N++ R +I  ++R  +   +FIE  TP+L  S+PEGARDF+V
Sbjct: 121 DLRMKYRYLDLRRNPVRNNMIIRHKIAQAVRRYLDGLDFIEVETPVLIKSTPEGARDFVV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 181 PSRMNAGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+EQ+DILNT E ++R +F+E    +       R+ Y DA+R YG+DKPD R  +    +
Sbjct: 240 FIEQEDILNTFEGLIRTLFKEIKGIDLPE--VPRMQYADAMRLYGSDKPDTRFDMQFVEL 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
                  +F VF      +    V  I AKG     R   D + ++ +         I+ 
Sbjct: 298 NHLVKGKDFPVF------DHAELVIGINAKGCASYTRKQVDELTDFIKRPQVGATGLIYL 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R +E G++     V K  N  + +     L+ Q GD    +AG   K     ++ R  + 
Sbjct: 352 RHNEDGSLK--SSVDKFYNEEDLKGWSAALNTQPGDLVLVMAGTTDKVRKQLSELRLEMG 409

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             LG+ + N F   W++DFP  EW+EE ++    H+PFT P+     L       ++A  
Sbjct: 410 NRLGLRDKNVFSALWVLDFPLLEWDEETERYHAMHHPFTSPKPEDIVLLDTKPAEVRANA 469

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H   +    F ++G S E  + +FG L  AF+ G PPHGGIA 
Sbjct: 470 YDMVINGTEVGGGSIRIHDRALQALMFKHLGFSTEEAQKQFGFLMDAFEFGAPPHGGIAF 529

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G DR+  +  G  ++R+V  FP + +  D+++ SPST+  +QL EL ++
Sbjct: 530 GFDRLCSIFAGLDSIRDVIAFPKNNSGRDVMIDSPSTIDEKQLNELKIK 578


>gi|311694935|gb|ADP97808.1| aspartyl-tRNA synthetase [marine bacterium HP15]
          Length = 602

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 238/598 (39%), Positives = 356/598 (59%), Gaps = 13/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  S +   V L GWVHR R HGG+IFLD+RD  G++QVV +PD+   F +A+
Sbjct: 2   RSHYCGGINESHIDQEVTLCGWVHRRRDHGGVIFLDLRDRDGMSQVVVDPDTPESFALAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V  R A T N N+ TGQ+EL  +++ IL+ A   P P+    +  E 
Sbjct: 62  KVRSEFVIKVTGRVRRRPAGTENNNMPTGQVELLGKELTILNAAATPPFPLDEHVDVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YRF+DLRR  +   +  R+R+ + +R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLRYRFVDLRRPEMINRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++GSF+ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQP-EFTQVDIEASF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ ++   E+++R +F++       S  F ++ Y +A++RYG+DKPDLR P+ + +V 
Sbjct: 241 IDEETLMKLNEDMIRALFKDVLEVELPS--FPQMPYAEAMQRYGSDKPDLRIPLELLDVN 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF+   + +P   V A+   KGG   R   D   ++    G  GLAYI   
Sbjct: 299 DLVEGVDFKVFAGP-AKDPKGRVAALRVPKGGELTRKQIDDYTKFVGIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
            D S  V G+  P+ K L      AI  R+  +DGD  FF A D     + A  A R  I
Sbjct: 358 -DLSKGVEGLQSPIIKFLGDDVALAIMERVGAEDGDIVFFGA-DKTNVVNEALGALRIKI 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +L ++    +   W++DFP +E    +  +   H+PFT P    E L   D  +  + 
Sbjct: 416 GHDLDMLTSE-WAPLWVVDFPMFE-ETPDGGLTAIHHPFTAPSCSPEDLAA-DPANALSR 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  ++    F  +GI +E    +FG L  A + G PPHGG+A
Sbjct: 473 AYDMVLNGTELGGGSIRIHDEKMQEAVFRILGIGEEEARAKFGFLLDALKFGCPPHGGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
            G+DR+VML+ GA ++R+V  FP +Q+   L+  +P  V  +QLREL +R+ +  K +
Sbjct: 533 FGLDRLVMLMTGASSIRDVIAFPKTQSATCLMTQAPGEVDEKQLRELHIRLRKPSKPV 590


>gi|224534804|ref|ZP_03675376.1| aspartate--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514052|gb|EEF84374.1| aspartate--tRNA ligase [Borrelia spielmanii A14S]
          Length = 586

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 221/591 (37%), Positives = 346/591 (58%), Gaps = 12/591 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++   C +L    +   V ++ W+ ++R HG   FLDIRD Y   QV+   +    +I +
Sbjct: 2   FKIIKCNELNEKLINKKVEINAWIKKIRHHGKFTFLDIRDRYEKAQVLVT-EEHLLKIVE 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + I GL++ R +  INAN+ TG  E+ A+ I+I+S   ELP  +  +    E+
Sbjct: 61  KIKLEYCIKIQGLLIKRPSNMINANMKTGYFEILAKNIDIISKCNELPFMIEDDNNASEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + +YR+LDLRRD+L   I+ R +  + +R  ++   F+E  TP    S+PEGARDF++P
Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLVKRKFLELETPTFVKSTPEGARDFVIP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++++I   +EN+L  +F+   N N +   F +I Y  A+  YG+DKPD R  +I+ +++
Sbjct: 240 VKKENIFKLIENMLFLIFKNCLNIN-LPKKFKKITYKKAMNTYGSDKPDTRFELILQDIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
            +  +SEF +F   L      ++  +  K    +RA  + + E A+     GL +     
Sbjct: 299 RNLKNSEFNIFKDTLKNKGVIKILIVKNKADKFSRAKINNLEEIAKLYKTQGLYFT---- 354

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422
            +  N    G +AK L     + I+    +++ D  FF A +  +  C      R  IA 
Sbjct: 355 -KIENNKFSGGIAKFLKTEEQQLIKT-YSLENNDIIFFTANNKWEIACKAMGQIRIKIAN 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481
           +L +I+ N FEF W+ DFP +E+++  K    AH+ F++P+   + +L+ N   ++    
Sbjct: 413 DLELIDDNKFEFLWVYDFPLFEYDKNTKTYTPAHHMFSLPKKRYIANLEKNPNKTMGEI- 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIV 582


>gi|300812627|ref|ZP_07093040.1| aspartate--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496408|gb|EFK31517.1| aspartate--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 614

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 227/598 (37%), Positives = 347/598 (58%), Gaps = 17/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +   V L GWV RVR  G +IF+D+RD  GI QVV N DS     ++A
Sbjct: 7   RTDYCGNITSQYLDQDVLLYGWVQRVRNLGQLIFIDLRDREGIVQVVVNHDSGQELMDVA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+  E+V+ + G V  RS++  N ++ TG +E+ A +I +L+ A+  P  +  +    E
Sbjct: 67  SSLGQEYVVEVKGHVNERSSK--NPDMKTGDVEVIASEITVLNKAKTPPFEIKDDLVASE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR TL   ++ R +I+ +    +  E FI   TP L  S+PEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPTLQNALIMRAQIMTATNAYLSGEGFINIETPDLGKSTPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA CFRDED R DR P EF Q+D+E S
Sbjct: 185 PSRVYPGSFYALPQSPQIFKQLLMGAGFDKYYQIARCFRDEDLRGDRQP-EFTQIDLETS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++ +    E +L  V ++   G  +     RI + +++ +YG DKPD R  +++H++
Sbjct: 244 FMDEEGVQEVTEGLLAKVMKDV-KGIDLQLPLPRITWQESMDKYGCDKPDTRYEMLIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
              F  S F+VF+  L  N G+ V  I  KGG    +R   + M ++ +     GLA++ 
Sbjct: 303 GNVFAKSGFKVFASALE-NGGF-VRGIAVKGGAKFYSRKKIEAMQDYIKRYHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E G+ +  GPV++ L+      +     ++ G+   FIA D  K C  + D  R  
Sbjct: 361 Y---EDGDFS--GPVSRFLSEEEKAGLVQEFSLEGGELLLFIA-DQWKVCCDSLDYLRRQ 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GII  + +++ W++D+P +E++E +++   AH+PFTMP      L   D     A
Sbjct: 415 TARETGIIPKDTYKYLWVVDWPLFEYDEGDERWIAAHHPFTMPDDKGIELLETDPHKAHA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  ++  + F  +G +KE    +FG L  A   G PPH G+
Sbjct: 475 RSYDIVLNGYELGGGSIRIHKRDIQEKMFKALGFTKERAYEQFGFLMDALDMGFPPHAGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR  MLL G  N+R+V  FP + +  + +M +P+ V+ +QL +LG+ + E  K+
Sbjct: 535 AIGLDRFAMLLAGKDNIRDVIAFPKNASASEPMMHAPAPVADQQLTDLGIEVAEAAKE 592


>gi|238854669|ref|ZP_04644999.1| aspartate--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664388|ref|ZP_05865240.1| aspartyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932940|ref|ZP_06338337.1| aspartate--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472206|ref|ZP_07812698.1| aspartate--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832459|gb|EEQ24766.1| aspartate--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260561453|gb|EEX27425.1| aspartyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281302975|gb|EFA95180.1| aspartate--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313449094|gb|EEQ68590.2| aspartate--tRNA ligase [Lactobacillus jensenii 1153]
          Length = 610

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/599 (37%), Positives = 348/599 (58%), Gaps = 17/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +   V L GWV RVR  G +IF+D+RD  GI QVV N +S     + A
Sbjct: 4   RTDYCGNITSQYLDQEVTLYGWVQRVRNLGNLIFIDLRDREGIVQVVVNHESGKDLMDKA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E+V+ + G V+ RS  ++N  + TG++E+ A  I +L+ A+  P  +  +    E
Sbjct: 64  DSLGNEYVIEVKGKVVKRS--SVNPEMKTGEVEVDATTITVLNEAKNPPFEIKDDLNANE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             + KYR+LDLRR TL + ++ R++I  ++     +E FI+  TP L  S+PEGARD+LV
Sbjct: 122 QTKLKYRYLDLRRSTLQRALITRSKITTAVHEFFDSEGFIDIETPDLGKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA CFRDED R DR P EF Q+DME S
Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCFRDEDLRGDRQP-EFTQIDMETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  + +  E +L+ V  +   G  +     RI ++DA+  YG+DKPD+R  + + ++
Sbjct: 241 FLDEKGVQDITERLLQKVMHDV-KGVDIKLPLPRITWNDAMNYYGSDKPDMRFDMKIQDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            E F  S+F+VFS   ++  G  V AI  +GG    +R   +   E+ +     GLA   
Sbjct: 300 NEVFKDSDFKVFSG--AIADGGFVKAIAVEGGAKAYSRKKIEEKQEYIKRFHAKGLA--- 354

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNH 419
           W   E G  +  GPV++ +     E ++   +++ G+   F+A D  K C  A    R  
Sbjct: 355 WAKFEDGEFS--GPVSRFITDSEAEQLKKIYNLKGGELLLFVA-DKWKVCCDALGYLRRS 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA EL +++ + + F W++D+P +E++E + +   AH+PFTMP      L   +     A
Sbjct: 412 IAIELNMVSKDDYHFEWVVDWPLFEYDEGDDQWIAAHHPFTMPDDEGIKLLETEPHKAHA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD++ NG+E+  G IR H  ++ L+    +G +KE    +FG L  A   G PPH G+
Sbjct: 472 RSYDIILNGYELGGGSIRIHKKDIQLKMLKALGFTKEKAYEQFGFLLDALDMGFPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           A G+DR  MLL G  N+R+V  FP + +  + +M +PS VS EQ+ ELG+ +  + + +
Sbjct: 532 AIGLDRFAMLLTGKDNIRDVIAFPKTASASEPMMKAPSPVSDEQMAELGIEVTASARSV 590


>gi|260494401|ref|ZP_05814532.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260198547|gb|EEW96063.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 592

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 233/601 (38%), Positives = 350/601 (58%), Gaps = 30/601 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+ G+L + ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLGELRLKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NLNIPTGEIEVFAKEIEILNACDTLPFQISGVDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  + G   +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P      +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKIISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L   G  +   P+AK L+    +AI  +   + GD  F +A       S     R
Sbjct: 359 YI--KLTADGITS---PIAKFLSENEMKAIIEKTQAKTGDVIFIVADKKKVVVSALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT       S+K  DL   
Sbjct: 414 LKIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDLDKF 466

Query: 478 KAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
            A Q        YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF
Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFGFFLDAF 526

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL +
Sbjct: 527 KYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDKKQLEELFI 586

Query: 590 R 590
           +
Sbjct: 587 K 587


>gi|288574557|ref|ZP_06392914.1| aspartyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570298|gb|EFC91855.1| aspartyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 599

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/598 (39%), Positives = 343/598 (57%), Gaps = 17/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+  CG +  S  G  V ++GWV + R  GGIIF+++ DH G  QVV NP+      + A
Sbjct: 12  RSVFCGSVNGSHEGQVVTVNGWVRKRRDLGGIIFIELWDHTGTVQVVFNPELCPEPHDRA 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-GEREYP 121
           K++RSE+V+ + G V  R   T N ++ TG+ E+      +L+ A+ LP  V  G     
Sbjct: 72  KALRSEFVVAVKGSVRVRPDGTCNDDMATGRWEIMVDDFVLLAPAKPLPFEVGEGTDGVD 131

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R  YR+LDLRR+ + +N+  R  +    R  +    F E  TP+LT S+PEGARD+L
Sbjct: 132 ENLRLSYRYLDLRRNRMQRNLRVRHDVARYTREFLSDRGFCEVETPVLTKSTPEGARDYL 191

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN GSF+ALPQ+PQ +KQ+LM SG DRYFQIA CFRDED R+DR P EF Q+D+E+
Sbjct: 192 VPSRVNPGSFFALPQSPQIFKQILMISGMDRYFQIAKCFRDEDLRADRQP-EFTQVDIEL 250

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ ++DI   ME  + G+F++   G  +   FLR+ Y +A+ R+G+DKPDLR P  + +
Sbjct: 251 SFLTEEDIYEMMEAYMVGLFKD-GLGVELQTPFLRMPYREAMDRFGSDKPDLRIPFEIVD 309

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           + + F    F+ F ++L    GY    +   G   +R   +++ E  ++ G P +AY  +
Sbjct: 310 LGDVFADGGFKPFEELLKRG-GYVRGVVLPGGASLSRRLIEQVCERGKALGAPEMAYFQF 368

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHI 420
           +     N    GP+AK L+      +       DGD  + +  +     CS     R  I
Sbjct: 369 K-----NGGVKGPLAKFLSDAKQADLGRISGASDGDVLYVMGHEDWSLVCSVLGQIRLEI 423

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL--SIK 478
           A+E G +  + +EF W+ +FP +EW+EEEK+    H+PFTMP   +E L   D    S++
Sbjct: 424 AKEHGHVK-DSWEFLWVTEFPLFEWDEEEKRWTSVHHPFTMPM--VEDLPFMDRAPGSVR 480

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG E+  G IR H   +  + F  +G S+     RFG L  A   G PPHGG
Sbjct: 481 SRAYDLVLNGNEVGGGSIRIHDPAIQSEVFGCLGFSENQARERFGFLLDALSYGTPPHGG 540

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G DR+VMLL G+ ++REV  FP +     L+ G+PS V + Q+ EL ++    PK
Sbjct: 541 IALGFDRLVMLLTGSNSIREVMAFPKTAKAQSLMSGAPSEVGITQMEELHIKSTFVPK 598


>gi|15673947|ref|NP_268122.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|24212420|sp|Q9CE80|SYD_LACLA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|12725007|gb|AAK06063.1|AE006426_9 aspartyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|326407503|gb|ADZ64574.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 590

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/601 (38%), Positives = 350/601 (58%), Gaps = 30/601 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT+  G++    +   V + GWV + R  GG+IF+D+RD  GI Q+V NP++A  ++A++
Sbjct: 3   RTNYAGNITEEYLNQTVTVKGWVAKRRNLGGLIFIDLRDREGIVQIVVNPETAAADVAEA 62

Query: 65  V---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
               R+E+VL + G V+ R+++  N  I TG IE+ A  IEILS ++  P  +  + E  
Sbjct: 63  ADKARNEFVLEVTGKVVERASK--NDKIKTGGIEIEATAIEILSTSKTTPFEIKDDVEVL 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R KYR+LDLRR  + KNI  R     S+R  +    FI+  TP L  S+PEGARD+L
Sbjct: 121 DDTRLKYRYLDLRRPEMLKNITMRHATTRSIREYLDGAGFIDVETPFLNKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +G DRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGEFYALPQSPQLMKQLLMTAGLDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ +++I +  E ++  V ++   G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEEEIQDLTEELIAKVMKDV-KGIDVTLPFPRMKYDDAMNFYGSDKPDTRFELLLTD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           ++      +F+VF +   V       AI  K      +R   D++ E A+  G  GLA++
Sbjct: 299 LSALAKTIDFKVFQEAEVVK------AIVVKDAADKYSRKSIDKLTEQAKQNGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            +   E G  A  G V+K L   +T++    L + D D   F+A D L   + A  A R 
Sbjct: 353 KF---EKGEFA--GGVSKFL-AESTDSFVNELKLTDNDLVLFVA-DSLDVANSALGALRL 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-------KG 471
            I ++ G+I+   F F W++D+P +EW++EE++   AH+PFT+P    ++        K 
Sbjct: 406 TIGKQQGLIDFRQFNFLWVIDWPMFEWSDEEERYMSAHHPFTLPTKETQAFLSADGHSKD 465

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +DL  ++A  YD+V NG+E+  G +R +  ++  +  S +G   E    +FG L  A   
Sbjct: 466 SDLKKVRAHAYDIVLNGYELGGGSLRINTRQLQEEMLSALGFKLEDANEQFGFLLEALDY 525

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL +++
Sbjct: 526 GFPPHGGLALGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSIVAEKQLEELSIKL 585

Query: 592 V 592
            
Sbjct: 586 A 586


>gi|291457466|ref|ZP_06596856.1| aspartate--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291381301|gb|EFE88819.1| aspartate--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 599

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 233/605 (38%), Positives = 346/605 (57%), Gaps = 39/605 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V L+GWV R R HGG+ F+D+RD  G+ QVV   +    ++A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDATGLVQVVIYDE----DMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117
            +RSE+V+ + G V  R     N ++ TG+IE+ A+ IE+L+ A+ LP  V        E
Sbjct: 62  PLRSEFVIQVTGDVRLRPDGNENTHLATGKIEVVAESIEVLAKADALPFQVSTALENESE 121

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294
           LDMEM++V+Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFG 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353
           NP++   +T++F ++ FRVF           V A+  KGG    R   D   +WAR +G 
Sbjct: 299 NPLV--ELTDYFKNTPFRVFQAPY-------VGAVVFKGGAATPRRQFDAWQDWARQRGA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAY+     E+G +   GPVAK+L+      +R  +  ++GD+ FF AG         
Sbjct: 350 KGLAYVV--FGENGELK--GPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESSQLLL 405

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464
              R  +A   G+++   F F W++DFP ++  ++    D A         H+PFTMP  
Sbjct: 406 GAVRVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D     +  YD+VCNG E+  G +R H  ++  +    +GI+KE  + +FG 
Sbjct: 466 DWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGF 525

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPH G+A G DR V +L GA ++R+V  FP +    D L G+P+ +S EQ 
Sbjct: 526 LLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585

Query: 585 RELGL 589
            E G+
Sbjct: 586 AETGV 590


>gi|294784989|ref|ZP_06750277.1| aspartate--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294486703|gb|EFG34065.1| aspartate--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 592

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/601 (38%), Positives = 351/601 (58%), Gaps = 30/601 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+ G+L V ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLGELRVKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NLNIPTGEIEVFAKEIEILNACDTLPFQISGIDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E+SFVE++D++N +E + + VF+  + G   +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEISFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P      +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKVISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L  +G  +   P+AK L+    +AI  +   + GD  F +A       S     R
Sbjct: 359 YI--KLTANGITS---PIAKFLSEEEMKAIIEKTKAKTGDVIFIVADKKKVVVSALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL--- 474
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT       S+K  DL   
Sbjct: 414 LKIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDLDKF 466

Query: 475 -----LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
                  I+   YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF
Sbjct: 467 LTGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFLDAF 526

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL +
Sbjct: 527 KYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFI 586

Query: 590 R 590
           +
Sbjct: 587 K 587


>gi|302326888|gb|ADL26089.1| aspartate--tRNA ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 623

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/600 (39%), Positives = 348/600 (58%), Gaps = 18/600 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG L   DVG  V L+GWV R R HGG+IF+D+RD YG TQ+V NPD  +   + A
Sbjct: 29  RTHNCGQLRKEDVGQTVTLAGWVDRRRDHGGVIFVDLRDKYGKTQIVFNPDYNADVLKTA 88

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY-- 120
           + +R+E+V+ + G V +R     N  + TG+IE+ A K+EIL+ A   PL +    E   
Sbjct: 89  EQLRNEYVIYVTGKVYAREEGNTNEKLATGEIEVKADKLEILNAALTSPLAINDPNEECK 148

Query: 121 -PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + +R +YR+LDLRR  + K ++ ++R + ++     +  F    TP L  S+PEGARD
Sbjct: 149 ENDDLRLQYRYLDLRRPWIQKKLLLKSRFLKAVYDFFYSNGFENIETPCLCKSTPEGARD 208

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN G FYALPQ+PQQYKQLLM +G DRYFQIA CFRDED R+DR P EF Q+D+
Sbjct: 209 YLVPSRVNPGKFYALPQSPQQYKQLLMIAGMDRYFQIAKCFRDEDLRADRQP-EFTQIDV 267

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV QD+++   +  +  V  +  N      +  R+ + +A+ +YG+DKPDLR  + +
Sbjct: 268 EMSFVNQDEVMEMFDKFVTEVLGKVWNFEP-PRHIRRMKWAEAMLKYGSDKPDLRFDLEI 326

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358
           H+V+E    S F VF   ++   G ++  I AKG     R   D +  +    G  GL +
Sbjct: 327 HDVSEIGAKSNFGVFKNCVAA--GGKIRGIAAKGCVDFTRKQIDELTAYVAKYGSKGLVW 384

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADAR 417
           +  R+ E+  V     V K         +R  +  + GD  FFIAG P K  + A    R
Sbjct: 385 M--RVKENDEVETQ--VGKFFTTEQLNELRDAVGAKCGDMMFFIAG-PEKIAATAMGQLR 439

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLS 476
             +A+  G+ +    EF WI +FP +E+++ E +    H+PFT P    ++ + G +L  
Sbjct: 440 LEVARIKGLRDPKKREFVWITEFPMFEYSDTEGRYMAMHHPFTNPLPEHLDMMLGGNLKD 499

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YDLV NG EI  G IR H  EV  + F  +G+S+E V+ +FG    AF+ G PPH
Sbjct: 500 CNAEAYDLVLNGVEIGGGSIRIHNPEVQEKVFRLLGLSEEQVKTKFGFFVDAFKYGAPPH 559

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V  + G +++R+   FP + +    +   PS V ++QL+++ +  V+ PK
Sbjct: 560 GGLAFGLDRVVATMEGEESIRDYIAFPKNTSASSPMDQCPSEVDLQQLQDIHIS-VQMPK 618


>gi|304396239|ref|ZP_07378121.1| aspartyl-tRNA synthetase [Pantoea sp. aB]
 gi|304356608|gb|EFM20973.1| aspartyl-tRNA synthetase [Pantoea sp. aB]
          Length = 592

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/598 (38%), Positives = 341/598 (57%), Gaps = 9/598 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F++A 
Sbjct: 2   RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQDAFKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N+++ TG++E+ AQ + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARDEKNKNSDMATGEVEVFAQALTIINRSE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMVTRLKTRAKITSFVRRFMDDEGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++++    +     F ++ + +A+ RYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREIMERLIRNLWQDVQGVDL--GEFPQMTFAEAMHRYGSDKPDLRNPMELVDVG 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF+VFS   +   G         G   +R   D   ++    G  GLA++   +
Sbjct: 297 DLLKNVEFQVFSGPANDEKGRVAALRVPTGAQLSRKQIDEYGKFVEIYGAKGLAWMKVNV 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422
              G      PVAK LN    E I  R   QDGD  FF A D  K  + A  A R  + +
Sbjct: 357 RADGLEGVQSPVAKFLNAEIVEGILSRTGAQDGDIIFFGA-DRAKVVADALGALRLKVGR 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL I +   +   W++DFP +E  +EE  +   H+PFT P+         D     A  Y
Sbjct: 416 ELNITDEKAWAPLWVIDFPMFE-EDEEGGLAAMHHPFTAPKEMSAEELAADPTRAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    FS +GI +     +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGKMQQTVFSILGIEEHEQREKFGFLLDALKFGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           +DR+ MLL G  N+R+V  FP +     ++  +PS  +   L ELG+++++  K  +K
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACMMTEAPSEANPASLLELGIQVIKKEKPEIK 592


>gi|325479560|gb|EGC82656.1| aspartate--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 582

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 222/595 (37%), Positives = 349/595 (58%), Gaps = 18/595 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACF 59
           M   RT+ CGDL + +V   V L GWV + R  G ++F+D+RD  GITQ VV   DS  +
Sbjct: 1   MEFKRTNMCGDLRIENVNDSVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVVREEDSENY 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              + +  E+V+ + G V  R  E+ N +I TG IE+ A KI IL  A+  P+ +  + +
Sbjct: 61  AKTREISQEYVIEVRGKVSER--ESKNKDIPTGDIEIIADKINILDKAKTPPIYIKDDDD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E++R KYR+LD+R+ ++ +N+  R+ I+ ++R  M   +F E  TP LT  +PEGARD
Sbjct: 119 VSENLRLKYRYLDMRKPSVQRNLKLRSDIVRTIREYMYENDFTEVETPFLTKPTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+N G FYALPQ+PQ  KQ+LM    DRYFQ+  CFRDED R++R P EF Q+D+
Sbjct: 179 YLVPSRINSGKFYALPQSPQLLKQILMIGSLDRYFQVVKCFRDEDLRANRQP-EFTQMDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF  QDD++   E +L+ +F+++++ + +     R+ Y +A+  YG+DKPDLR    +
Sbjct: 238 EMSFSNQDDVIAMNEGLLKELFDKYTDYD-LKLPIDRMDYSEAMNSYGSDKPDLRYGYKI 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLA 357
            +V+E FV S+F+VF+   +   G  V A+  KG  GN  R   D++ ++ +  G  GL+
Sbjct: 297 EDVSEVFVDSDFKVFAD--NTKDGKSVRALNFKGIAGNYSRKQLDKLTDFVKDYGLKGLS 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           YI +  DE         + K L       ++ +L+M+DGD    I  D  +    A  A 
Sbjct: 355 YIKYS-DEI-----QSSIKKFLTDDIISGLKEKLNMEDGD-LILIGADKDRVVLEAMGAL 407

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +A++  +I    +  CW+++FP +E++EEE +    H+PFTMP      L   +   
Sbjct: 408 RRKVAKDNDLIEKE-YALCWVVNFPMFEYSEEEDRYVAQHHPFTMPNEDDIDLLLTEPEK 466

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++   YD+V NG E+  G +R + SE+  + F  + +S+E ++N+FG    A Q G PPH
Sbjct: 467 VRTQAYDIVINGDEMGGGSVRINNSELQEKVFEALKLSEEDIKNKFGFFIEALQYGTPPH 526

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR++ML     N++++  FP +Q+    L  +PS V  + L EL +++
Sbjct: 527 AGLAYGLDRLLMLFAKTDNIKDIIAFPKTQSATCPLTEAPSIVDEKALNELNIKL 581


>gi|297571408|ref|YP_003697182.1| aspartyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931755|gb|ADH92563.1| aspartyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 635

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 241/615 (39%), Positives = 340/615 (55%), Gaps = 36/615 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT   G L   D+GS V L+GWV R R HGGI F+D+RD  GI Q+         E+A  
Sbjct: 33  RTRMAGSLRKEDIGSTVTLTGWVDRRRDHGGIAFIDLRDASGIAQITIRA-----EVAHE 87

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+VL + G V  R     NA I TG IE+ A ++E+L+ +  LP  V    E   S+
Sbjct: 88  LRSEYVLKVTGTVNERPEGNANAAIPTGDIEVEAAEVEVLNPSAPLPFQVSDAAEDAGSV 147

Query: 125 ----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R KYR+LDLRR    K I  R ++  + R  +    F+E  TP L  S+PEGARDF
Sbjct: 148 NEETRLKYRYLDLRRSYEQKAIRLRAKVSQAARRVLDGHEFVEIETPTLIRSTPEGARDF 207

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 208 IVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 266

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D++   E+VL+ ++     G  +      + Y DA+  YG+DKPDLR    + 
Sbjct: 267 MSFVEQEDVMAVAEDVLKEIWGLI--GYELPTPIPHMTYKDAMENYGSDKPDLRFEQKLI 324

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           ++T++F ++ FRVF           V A+   GGG   R   D+  EWA+++G  GLAY+
Sbjct: 325 DLTDYFANTPFRVFQNDY-------VGAVVMPGGGSQPRRTFDKWQEWAKARGAKGLAYV 377

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              + E G +   GPVAK+++      +        GD  FF AG+P         AR  
Sbjct: 378 --TIAEDGTIG--GPVAKNISDDERAGLLDVTGAVAGDCIFFAAGEPGPSRELLGAARLE 433

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWN---EEEKKIDFA-------HNPFTMPQGGMESL 469
           I +  G+IN + + F W++D P ++     E E  +  A       H+ FT P+      
Sbjct: 434 IGKRCGLINEDDWAFVWVVDAPLFKSTKAAEAEGDVAVADGAWTAVHHAFTSPKPEWLDS 493

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              D  +  A+ YD+VCNG EI  G IR H  +V  + F  +G+ +E    +FG L  AF
Sbjct: 494 FDQDPGNALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGLDEEQAREKFGFLLDAF 553

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGGIA G DRIV LL  A ++R+V  FP   N  D +  +P+ ++ +Q +E G 
Sbjct: 554 KFGAPPHGGIAFGWDRIVALLTKAPSIRDVIAFPKIGNGWDPMTDAPAPITPQQRKEAG- 612

Query: 590 RIVENPKKILKISVT 604
            +   PKK   +  T
Sbjct: 613 -VDAKPKKKSDVEST 626


>gi|192360897|ref|YP_001981523.1| aspartyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|238692418|sp|B3PB55|SYD_CELJU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|190687062|gb|ACE84740.1| aspartyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 601

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 233/607 (38%), Positives = 343/607 (56%), Gaps = 33/607 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG L  S +   V L GWV R R HGG+IF+D+RD  GI QVV +PD    F +A 
Sbjct: 2   RSQYCGALNASHINQEVTLCGWVDRRRDHGGVIFIDLRDREGIVQVVFDPDGKDNFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR E+VL + G V +R+A T+N N+ TG+IE+    + IL+ A+ +P P+       E 
Sbjct: 62  KVRGEYVLQVTGKVRARAAATVNPNMATGEIEVYGTALTILNEAQTIPFPLDSYANVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYRFLDLRR  +  N+  R ++ +++R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKYRFLDLRRTEMQNNLRFRGKVTSAIRNYLDRHGFLDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHDGKFFALPQSPQLFKQLLMVAGYDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + QD I+   E + R +F++  N          + + +AI +YG+DKPD+R P+ + ++ 
Sbjct: 241 MSQDQIMAVTEGMFRELFKDLMN--IEFEEIRHMPFSEAIAKYGSDKPDMRIPLELVDIK 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361
           +     +F+VF+   + +P   V A+   GG     R   D   ++    G  GLAYI  
Sbjct: 299 DLVTDVDFKVFAGPAN-DPKARVTALKVPGGNEKLTRKQIDDYTKFVGIYGAKGLAYIKV 357

Query: 362 RLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             D+S    G+  P+ K+L +    AI  R+   +GD  FF            AD    +
Sbjct: 358 N-DKSDLEEGLQSPIVKNLPVPVRAAILERVGADNGDLIFF-----------GADKHKVV 405

Query: 421 AQELGIINCNC----------FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
            + LG + C            +   W++DFP +E +++       H+PFT P    E L 
Sbjct: 406 TEALGALRCKLGADLNLYTAQWAPLWVVDFPMFEEDDKGGWTSI-HHPFTSPSCTPEELV 464

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            N   ++ +  YDLV NG E+  G +R H   +    F  +GIS E    +FG L  A  
Sbjct: 465 ANPGAAL-SRAYDLVLNGVELGGGSVRIHSPAMQQAVFKILGISPEEQREKFGFLLDALS 523

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGG+A G+DR+VML++GA ++R+V  FP +Q+   ++  +P TV   QLREL +R
Sbjct: 524 YGAPPHGGLAFGLDRLVMLMVGASSIRDVIAFPKTQSAACVMTDAPGTVDELQLRELHIR 583

Query: 591 IVENPKK 597
           +  N KK
Sbjct: 584 L-RNQKK 589


>gi|308187177|ref|YP_003931308.1| Aspartyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308057687|gb|ADO09859.1| Aspartyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 592

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/594 (38%), Positives = 339/594 (57%), Gaps = 9/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F++A 
Sbjct: 2   RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQDAFKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N+++ TG++E+ AQ + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARDEKNKNSDMATGEVEVFAQALTIINRSE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMVTRLKTRAKITSFVRRFMDDEGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    + + ME ++R ++++    +     F ++ + +A+ RYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVRDIMERLIRNLWQDVQGVDL--GEFPQMTFAEAMHRYGSDKPDLRNPMELVDVG 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G   +R   D   ++    G  GLA++   +
Sbjct: 297 DLLKSVEFQVFSGPANDEKGRVAALRVPTGAQLSRKQIDEYGKFVEIYGAKGLAWMKVNV 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422
              G      PVAK LN    E I  R   QDGD  FF A D  K  + A  A R  + +
Sbjct: 357 RADGLEGVQSPVAKFLNAEIVEGILSRTGAQDGDIIFFGA-DRAKVVADALGALRLKVGR 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL I +   +   W++DFP +E  +EE  +   H+PFT P+         D     A  Y
Sbjct: 416 ELNITDEKAWAPLWVIDFPMFE-EDEEGGLAAMHHPFTAPKEMSADELAADPTRAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    FS +GI +     +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGKMQQTVFSILGIEEHEQREKFGFLLDALKFGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR+ MLL G  N+R+V  FP +     ++  +PS  +   L ELG+++V+  K
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACMMTEAPSEANPASLLELGIQVVKKEK 588


>gi|119953236|ref|YP_945445.1| aspartyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|254781718|sp|A1QZN3|SYD_BORT9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119862007|gb|AAX17775.1| aspartyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 585

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 214/589 (36%), Positives = 337/589 (57%), Gaps = 11/589 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++T  C  +    +   + ++ WV ++R HG + F+++RD Y   QV+ N D    +I  
Sbjct: 2   FKTIKCNQINDKLINQKIEINAWVKKIRHHGKVTFINLRDRYDEAQVLVN-DEKLLKITS 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + + G +  R +  +N  + TG  E+ A+ I I+S   ELP  +       E+
Sbjct: 61  QIKMEYCIKVQGKLELRPSNLVNKEMRTGAFEILAENINIISRCNELPFMIEDNNNANEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + +YR+LDLRR+   + I+ R+++ +++R  +  ++F+E  TP    S+PEGARDFLVP
Sbjct: 121 AKLEYRYLDLRREEQKQKIILRSKVTHTIRNYLTKKDFLELETPTFVKSTPEGARDFLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++G FYALPQ+PQ YKQL M +G D+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGHFYALPQSPQIYKQLTMIAGLDKYFQIARCYRDEDSRGDRQP-EFTQLDIEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++++I   MEN++  +F+   N  ++   F R+ Y  A+  YG+DKPD R  +++ ++ 
Sbjct: 240 IKKENIFKLMENLIFTIFKNTLNI-SLPKKFKRMTYKHAMNTYGSDKPDTRYELLIQDMG 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           ++F  S F VF  IL      +   I  +    +R+  + + E A+     GL   F ++
Sbjct: 299 KYFKQSSFNVFKDILQNKGTIKALIIKNQAHNFSRSKINNLEEHAKIYKTSGL--YFAKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           + +  V G   +AK LN +     +    +++ D  FFIA      C      R  IA E
Sbjct: 357 ENNEFVGG---IAKFLNKIKQTLFQT-YSLKNNDIIFFIADSWETACKAMGQIRIKIANE 412

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQY 482
           L + N N FEF WI DFP +E++E+ K    AH+ F++PQ   +++L+ N    +    Y
Sbjct: 413 LNLTNKNTFEFLWIYDFPLFEYDEDTKNYKAAHHMFSLPQQKYIDTLESNP-SKVLGEVY 471

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+ SG IR H  E+  + F+ VG    + E RFG   +A + G P HGGIA G
Sbjct: 472 DLVLNGMELGSGSIRVHTRELQQRIFNIVGFKDTIAEERFGFFLKALEYGAPIHGGIAIG 531

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IDR++M++  + ++++V LFP +      L  +PS V  EQLREL L I
Sbjct: 532 IDRLLMIMTHSSSIKDVILFPKNSFAASPLDKAPSKVPNEQLRELNLTI 580


>gi|160889604|ref|ZP_02070607.1| hypothetical protein BACUNI_02030 [Bacteroides uniformis ATCC 8492]
 gi|156861121|gb|EDO54552.1| hypothetical protein BACUNI_02030 [Bacteroides uniformis ATCC 8492]
          Length = 585

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/594 (38%), Positives = 348/594 (58%), Gaps = 17/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           YR+H+CG+L +SDV   V L+GWV R R  GG+ F+D+RD YGITQ+V N +  +   E 
Sbjct: 2   YRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  R ++  N +I TG IE+   ++++L+ +   P  +    +  
Sbjct: 62  ANRLGREFVIQVKGTVNERFSK--NQHIPTGDIEIIVSELDVLNSSLTPPFTIEENTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  +  N+  R ++   +R  + ++ FIE  TPIL  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQDD++N  E + + +F+E   G  ++  F+R+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQDDVINLFEGMAKYLFKEI-RGVEMNEPFMRMPWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDIMKGHGFPVFD-----NAAY-IGGICAEGAAHYTRKQLDVLTEFVKRPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  GNV     V K       + ++   + + GD    ++G D +K      + R  
Sbjct: 352 ARVEADGNVK--SSVDKFYAQEVLQEMKAAFNAKPGDLILILSGDDAMKTRKQLNELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW++EE ++   H+PFT P+     L   D  +++A
Sbjct: 410 MGNQLGLRDKNKFVCLWVVDFPMFEWSDEEGRLMAMHHPFTHPKDEDIPLLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+VCNG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAQEQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL L IVE
Sbjct: 530 AYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSVIDQKQLDELNL-IVE 582


>gi|120554627|ref|YP_958978.1| aspartyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|166225355|sp|A1U1C2|SYD_MARAV RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|120324476|gb|ABM18791.1| aspartyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 599

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/596 (38%), Positives = 346/596 (58%), Gaps = 9/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  S +   V L GWVHR R HGG+IFLD+RD  G++QVV +PD+   F +A+
Sbjct: 2   RSHYCGGINESHIDQEVTLCGWVHRRRDHGGVIFLDLRDRDGMSQVVVDPDTPESFALAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V  R A T N N+ TGQ+EL  +++ IL+ A   P P+    +  E 
Sbjct: 62  KVRSEFVIKVTGRVRRRPAGTENNNMPTGQVELLGKELVILNAAATPPFPLDEHVDVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YRF+DLRR  +   +  R+R+ + +R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLRYRFVDLRRPEMINRLRFRSRVTSYIRNFLDSRGFMDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++GSF+ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQP-EFTQVDIEASF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ ++   E ++R +F++  +       F R+ Y +A++RYG+DKPDLR P+ + +V 
Sbjct: 241 IDEETLMGLNEEMIRSLFKDVLDVEL--PEFPRMPYSEAMQRYGSDKPDLRIPLELQDVG 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF+   + +P   V A+   KG    R   D    +    G  GLAYI   
Sbjct: 299 DLVESVDFKVFAGP-AKDPKGRVAALRVPKGAELTRKQIDDYTRFVGIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K L      AI  R+  +DGD  FF A             R  +  
Sbjct: 358 ELTKGAEGLQSPIVKFLGDDVALAIMERVGAEDGDIVFFGADKATVVNEALGALRIKVGH 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L ++ C  +   W++DFP +E    +  +   H+PFT P    E L   D  +  +  Y
Sbjct: 418 DLNMLTCE-WAPMWVVDFPMFE-ELPDGNLTAIHHPFTAPSCSPEDLAA-DPANALSRAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  ++    F  +GI +E    +FG L  A + G PPHGG+A G
Sbjct: 475 DMVLNGTELGGGSIRIHDEKMQEAVFRILGIGEEEARAKFGFLLDALKFGCPPHGGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +DR+VML+ G+ ++R+V  FP +Q+   L+  +P  V  +QL+EL +R+  + K +
Sbjct: 535 LDRLVMLMTGSSSIRDVIAFPKTQSATCLMTQAPGEVDEKQLKELHIRLRRSAKAV 590


>gi|261417215|ref|YP_003250898.1| aspartyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373671|gb|ACX76416.1| aspartyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 597

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/600 (39%), Positives = 348/600 (58%), Gaps = 18/600 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG L   DVG  V L+GWV R R HGG+IF+D+RD YG TQ+V NPD  +   + A
Sbjct: 3   RTHNCGQLRKEDVGQTVTLAGWVDRRRDHGGVIFVDLRDKYGKTQIVFNPDYNADVLKTA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY-- 120
           + +R+E+V+ + G V +R     N  + TG+IE+ A K+EIL+ A   PL +    E   
Sbjct: 63  EQLRNEYVIYVTGKVYAREEGNTNEKLATGEIEVKADKLEILNAALTSPLAINDPNEECK 122

Query: 121 -PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + +R +YR+LDLRR  + K ++ ++R + ++     +  F    TP L  S+PEGARD
Sbjct: 123 ENDDLRLQYRYLDLRRPWIQKKLLLKSRFLKAVYDFFYSNGFENIETPCLCKSTPEGARD 182

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN G FYALPQ+PQQYKQLLM +G DRYFQIA CFRDED R+DR P EF Q+D+
Sbjct: 183 YLVPSRVNPGKFYALPQSPQQYKQLLMIAGMDRYFQIAKCFRDEDLRADRQP-EFTQIDV 241

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV QD+++   +  +  V  +  N      +  R+ + +A+ +YG+DKPDLR  + +
Sbjct: 242 EMSFVNQDEVMEMFDKFVTEVLGKVWNFEP-PRHIRRMKWAEAMLKYGSDKPDLRFDLEI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358
           H+V+E    S F VF   ++   G ++  I AKG     R   D +  +    G  GL +
Sbjct: 301 HDVSEIGAKSNFGVFKNCVAA--GGKIRGIAAKGCVDFTRKQIDELTAYVAKYGSKGLVW 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADAR 417
           +  R+ E+  V     V K         +R  +  + GD  FFIAG P K  + A    R
Sbjct: 359 M--RVKENDEVETQ--VGKFFTTEQLNELRDAVGAKCGDMMFFIAG-PEKIAATAMGQLR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLS 476
             +A+  G+ +    EF WI +FP +E+++ E +    H+PFT P    ++ + G +L  
Sbjct: 414 LEVARIKGLRDPKKREFVWITEFPMFEYSDTEGRYMAMHHPFTNPLPEHLDMMLGGNLKD 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YDLV NG EI  G IR H  EV  + F  +G+S+E V+ +FG    AF+ G PPH
Sbjct: 474 CNAEAYDLVLNGVEIGGGSIRIHNPEVQEKVFRLLGLSEEQVKTKFGFFVDAFKYGAPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V  + G +++R+   FP + +    +   PS V ++QL+++ +  V+ PK
Sbjct: 534 GGLAFGLDRVVATMEGEESIRDYIAFPKNTSASSPMDQCPSEVDLQQLQDIHIS-VQMPK 592


>gi|116670838|ref|YP_831771.1| aspartyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|166225316|sp|A0JXA1|SYD_ARTS2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116610947|gb|ABK03671.1| aspartyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 596

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 231/603 (38%), Positives = 332/603 (55%), Gaps = 27/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    +G  V L+GWV R R HGG+ F+D+RD  G++QVV   +    E+   
Sbjct: 3   RTHDLGSLRSEHIGQTVTLAGWVGRRRDHGGVAFVDLRDASGVSQVVVREE----EVFHG 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL + G V  R     N  + TGQIE+ A+K+ IL+ ++ LP  +    E  E  
Sbjct: 59  LRNEYVLQVIGTVSQRPEGNENPALATGQIEVIAEKVTILNTSDPLPFQIDEHVEVGEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R K+R+LDLRR    +N+  R+      R  +  + ++E  TP LT S+PEGARDF+VP+
Sbjct: 119 RLKHRYLDLRRPGPARNMRLRSEANRVARELLHRDGYVEIETPTLTRSTPEGARDFVVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLL   GF++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDDI++  E++++ +++       +     RI Y DA+ RYG+DKPDLR  + +  +TE
Sbjct: 238 EQDDIISLGESIVKALWQLID--VEIPTPIQRITYADAMARYGSDKPDLRFGLELTELTE 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + F VF       P      +P       RA  D   EWA+ +G  GLAY+ ++  
Sbjct: 296 FFKDTNFGVFKA-----PYVGAVVMPGGASQARRAL-DAWQEWAKQRGAKGLAYVLFK-- 347

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +A  GPVAK+L       +   +  + GD  FF AG+     +    AR  I    
Sbjct: 348 EDGELA--GPVAKNLTDTERAGLADAVGAKPGDCIFFAAGEKTPSRALLGAARVEIGHRT 405

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDL 474
           G+IN   + FCW++D P +E                +    H+ FT P+         D 
Sbjct: 406 GLINPADWAFCWVVDAPMFEPAAAAVASGDVAVGAGQWTAVHHAFTSPKPEFMDSFDKDP 465

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  ++ YD+VCNG EI  G IR H  +V  + F  +G+ K   E +FG L   F+ G P
Sbjct: 466 ESALSYAYDIVCNGNEIGGGSIRIHERDVQERVFELMGLDKADAETKFGFLLEGFKFGAP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DR+V LL G +++R+V  FP S    D L  +P+ ++ +Q +E G+     
Sbjct: 526 PHGGIAFGWDRVVALLAGVESIRDVIAFPKSGGGYDPLTQAPAPITAQQRKEAGVDFKPE 585

Query: 595 PKK 597
            KK
Sbjct: 586 AKK 588


>gi|260436142|ref|ZP_05790112.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260414016|gb|EEX07312.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 609

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/604 (37%), Positives = 348/604 (57%), Gaps = 30/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL   ++   V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSNGCGDLREQNIDQQVQLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGADAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119
           + +RSE VL ++G V +R  E++N  + TG +E+ A  I +L SV   LP PV    E  
Sbjct: 62  EHLRSETVLQVEGKVRARPGESLNDKLATGAVEVLASGITVLNSVKGNLPFPVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR  ++ N+  R + I + R  +    FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAQTIQAARRFLEDAGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YVLPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q+ IL   E+++  +++    G  +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQEQILELNESLICAIWKAV-KGIELPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351
            NV++      F+VFS  +      +  A+P    GGN A          D  +E A+  
Sbjct: 300 TNVSDIVKDMGFKVFSGAVKSGGAVKCIAVP----GGNDAVSNVRIKPGGDVFSE-AQKA 354

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLA+I  R+ + G +  +G +  +L+    + +  R   + G    F AGD      
Sbjct: 355 GAGGLAFI--RVRDGGEIDTIGAIKDNLSDEQKQELLSRTGAEPGTLLLFGAGDTATVNK 412

Query: 412 FAADARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG--- 464
                R ++A+ELG++      + + F W++DFP +E+N +E + +  H+PF  P     
Sbjct: 413 ALDRVRQYLAKELGMVKADRDNDQWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNAEDL 472

Query: 465 GMESLKGNDLL-SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
           G ++ K  D+L   +A  YDLV NG E+  G +R H S +  Q    VG+  E  + +FG
Sbjct: 473 GSDASKWADILPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQEQFG 532

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            L  A   G PPHGG+A G+DR+VMLL G +++R+   FP +Q    L+  +P  V+ +Q
Sbjct: 533 FLMDALDVGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFPKTQQARCLMTSAPGGVADKQ 592

Query: 584 LREL 587
           L EL
Sbjct: 593 LEEL 596


>gi|319953296|ref|YP_004164563.1| aspartyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421956|gb|ADV49065.1| aspartyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 584

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 340/592 (57%), Gaps = 17/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           YR+HSCG+L  ++    V LSGWV +VR  G +I+ D+RD YGITQ++ + +    A  E
Sbjct: 2   YRSHSCGELRATNNNQEVILSGWVQKVRDKGFVIWADLRDRYGITQLIFDEERTSKALLE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+S+  E+V+ I G V+ R+++  N+NI TG IE+  +++ +L+ A   P  +  + + 
Sbjct: 62  QARSLGREFVIQIKGTVIERASK--NSNIPTGDIEILVKELTVLNKALVPPFTIEDKTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LD+RR+ +  N++ R ++   +R  +  E FIE  TP L  S+PEGARDF
Sbjct: 120 GEDIRMKYRYLDIRRNPVKNNLIFRHKVAMEVRKFLSDEGFIEVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DILN  EN+ + + +E        ++F R+ YDDA+R YG DKPD+R  +   
Sbjct: 239 MAFVEQEDILNIFENLTKYLLKEVKGFEI--DSFPRMTYDDAMRTYGNDKPDIRFDMKFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
            +     H EF +F      N    V  I   G     R   D + +W R         +
Sbjct: 297 ELNNVAQHKEFGIF------NDAELVVGIAVPGAATYTRKEIDALIDWVRRPQVGAKGMV 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + + +E G+      V K  +  +        + + GD    ++GD  K  +  +  R  
Sbjct: 351 YAKYNEDGSFK--SSVDKFYDQEDLAKWAEVTNAKPGDLICVLSGDANKTRTQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ LG+ N   F   W++DFP  E +EE       H+PFT P+ G   L   D  ++KA
Sbjct: 409 LAERLGLRNPEEFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDTDPGAVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H  ++    F ++G + E  + +FG L  AFQ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKDMQATMFKHLGFTPEEAKAQFGFLMDAFQYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+V +L G + +R+   FP + +  D+++ +P+ +   QL+EL L++
Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAKIDEVQLKELHLKL 580


>gi|254187701|ref|ZP_04894213.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|157935381|gb|EDO91051.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
          Length = 600

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/601 (39%), Positives = 338/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F + + G  +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIF-KMTIGVELDATFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   QDGD  FF A D  K  + +  A       
Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++EE +   AH+PFT P+         D    
Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+   E P
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598

Query: 596 K 596
           K
Sbjct: 599 K 599


>gi|319940836|ref|ZP_08015175.1| aspartyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319805718|gb|EFW02499.1| aspartyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 601

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/598 (39%), Positives = 336/598 (56%), Gaps = 8/598 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT   G +  S +G  V L GW HR R HGG+IF+D+RD  G+ QVV +PD    F  A 
Sbjct: 2   RTVYSGLVDESFIGQTVTLYGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEVFSTAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             R+E+ L + G+V +R   T N ++I+G +E+   ++EIL+ +   P  +  E    E+
Sbjct: 62  HCRNEYCLKVVGVVRARPEGTKNPSLISGGVEVLCHELEILNPSATPPFHLDDE-NLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  YR LDLRR  + KN+  R R   + R  + A  FI+  TP LT S+PEGARD+LVP
Sbjct: 121 TRLTYRVLDLRRPVMQKNLRTRYRTAMAFRKFLDANGFIDVETPALTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV +G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVQEGCFFALPQSPQLFKQLLMVAGFDRYYQIVKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D+I   ME ++R VF+E  + + V N F  + +DDA+ +YG+DKPDLR  + +H VT
Sbjct: 240 LNMDEIRGLMEELIRTVFKEVLDVDFV-NPFPVMLWDDAMAKYGSDKPDLRISLRLHEVT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   +S F+VFS + S++ G  V           R+  D   E+ +  G  GLAYI    
Sbjct: 299 DIVENSAFKVFSGVKSLHNGKVVAMCVPGAAQLPRSEIDSYTEFVKIYGAKGLAYIKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K+L+      I  R+  +DGD  FF A             R  I   
Sbjct: 359 LARGREGLQSPIVKNLSDEELNGILTRVGAKDGDIVFFGADKAKVVWDSLGALRLKIGHS 418

Query: 424 LGIINCNCF----EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
              +    F    +  W+++FP +E++EE+++    H+PFT P  G E     D     A
Sbjct: 419 DFGVKTGLFTPGWKPLWVINFPMFEYSEEDQRWVACHHPFTCPLDGDEDKLLTDPEHCYA 478

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD V NG+EI  G IR H  +V  + F+ + I  E    +FG L  A + G PPHGG+
Sbjct: 479 KAYDCVLNGWEIGGGSIRIHREDVQEKVFAALKIGPEEARQKFGFLLDALKFGAPPHGGL 538

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DRIV +++ A ++R+V  FP +Q    LL  +PS V  +QLREL +++    KK
Sbjct: 539 AFGLDRIVAMMVDAPSIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIKLRREVKK 596


>gi|270262227|ref|ZP_06190499.1| hypothetical protein SOD_b04350 [Serratia odorifera 4Rx13]
 gi|270044103|gb|EFA17195.1| hypothetical protein SOD_b04350 [Serratia odorifera 4Rx13]
          Length = 594

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 237/594 (39%), Positives = 345/594 (58%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A F+ A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQKAAFDKAY 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  +EI++ +E  PLP+   +   E 
Sbjct: 62  DLRNEFCIQIVGTVRARPDSQINKDMSTGEVEVFAHALEIINRSE--PLPLDSNQVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSNGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME + R ++ +    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLARDLWLDVKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V AI   GG    R   D    +    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDAKG-RVAAICVPGGAQLTRKLIDEYGTFVNIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK L+    EAI  R + Q GD  FF A D  K  + A  A R  + 
Sbjct: 356 DRAAGMEGVQSPIAKFLSAEVLEAILARTNAQTGDILFFGA-DSFKIVTDAMGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++L +   + +   W++DFP +E  + E  +   H+PFT P+    E L      +I A 
Sbjct: 415 RDLQLTKLDSWAPLWVVDFPMFE-EDGEGGLAAMHHPFTAPRDMSPEELNSAPTTAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H SE+    FS +GI++     +FG L  A + G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHRSEMQQTVFSILGINEHEQREKFGFLLDALKYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+ELG+ +V+ 
Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLQELGICVVKK 586


>gi|78214099|ref|YP_382878.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|97196976|sp|Q3AGF9|SYD_SYNSC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78198558|gb|ABB36323.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 609

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/604 (38%), Positives = 345/604 (57%), Gaps = 30/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL   ++   V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSNGCGDLREQNIDQQVQLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGADAFTVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119
           + +RSE VL ++G V +R  E++N  + TG +E+ A  I +L SV   LP PV    E  
Sbjct: 62  EHLRSETVLQVEGKVRARPGESLNDKLATGAVEVLASGITVLNSVKGNLPFPVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR  ++ N+  R + I + R  +    FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAQTIQAARRFLEDAGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +L+PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YLLPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQMARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q+ IL   E+++  +++    G  +   F RI + DA+  YGTD+PD R  + +
Sbjct: 241 EMSFMDQEQILELNESLICAIWKTV-KGIELPRPFPRITWHDAMEHYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351
            NV++      F+VFS  +      +  A+P    GGN A          D  +E A+  
Sbjct: 300 TNVSDIVKDMGFKVFSGAVKAGGAVKCIAVP----GGNDAVSNVRIKPGGDVFSE-AQKA 354

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLA+I  R+ + G +  +G +  +L+    + +  R   + G    F AGD      
Sbjct: 355 GAGGLAFI--RVRDGGEIDTIGAIKDNLSDEQRQELLSRTGAEPGTLLLFGAGDTATVNK 412

Query: 412 FAADARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ---- 463
                R ++A+ELG++      + + F W++DFP +E+N +E + +  H+PF  P     
Sbjct: 413 ALDRVRQYLAKELGMVKADRDNDQWNFLWVVDFPMFEFNGDENRYEALHHPFCAPNAEDL 472

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
           GG  S     L   +A  YDLV NG E+  G +R H S +  Q    VG++ E  + +FG
Sbjct: 473 GGDASKWSETLPGARAQAYDLVLNGLELGGGSLRIHDSTLQRQVLQTVGLTLEEAQEQFG 532

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            L  A   G PPHGG+A G+DR+VMLL G +++R+   FP +Q    L+  +P  V+ +Q
Sbjct: 533 FLMDALDVGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFPKTQQARCLMTSAPGGVADKQ 592

Query: 584 LREL 587
           L EL
Sbjct: 593 LEEL 596


>gi|318605496|emb|CBY26994.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 598

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 234/593 (39%), Positives = 348/593 (58%), Gaps = 15/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     E +VFS   +   G  V A+   GG    R   D   ++    G  GLA++   
Sbjct: 297 DLVKDVESKVFSGPANDAKG-RVAALRVPGGAQVTRKQIDEYGQFVGIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
            D +  V G+  P+AK L+    +AI  R   + GD  FF A D  K  + A  A R  +
Sbjct: 356 -DRAAGVEGVQSPIAKFLSADVLDAILARTQAESGDILFFGA-DSFKVVTDAMGALRLKV 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
            ++L +   + +   W++DFP +E ++ E  +   H+PFT P+    E L      +I A
Sbjct: 414 GRDLALTKLDSWAPLWVVDFPMFE-DDSEGGLSAMHHPFTAPKDMSPEQLAAAPTTAI-A 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H +E+  Q F  +GI++E    +FG L  A + G PPH G+
Sbjct: 472 NAYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEEEQREKFGFLLDALKFGTPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V
Sbjct: 532 AFGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584


>gi|154482689|ref|ZP_02025137.1| hypothetical protein EUBVEN_00365 [Eubacterium ventriosum ATCC
           27560]
 gi|149736465|gb|EDM52351.1| hypothetical protein EUBVEN_00365 [Eubacterium ventriosum ATCC
           27560]
          Length = 596

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/592 (38%), Positives = 349/592 (58%), Gaps = 11/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIA 62
           +R+H C ++   ++G  V + GWV + R  G +IF+D+RD  G+ Q+V + ++   FE A
Sbjct: 9   HRSHRCTEVSNKNIGETVTVMGWVQKRRNLGSLIFIDLRDRSGLLQLVFDENNGEVFEKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K++RSE+V+  +G+V  RS   +N N+ TG IE++   + ILS AE  P PV  +    E
Sbjct: 69  KNLRSEFVIAAEGVVRQRSG-AVNENMATGDIEVTVNTLRILSEAETPPFPVEEDANTRE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR+  L +N+  R+ I   +R  M  E FIE  TP L  S+PEGARD+LV
Sbjct: 128 ELRLKYRYLDLRKPHLQRNLKMRSDITTFIRKFMSNEGFIEIETPTLCKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ YKQLLM SGFDRY QIA C+RDED R+DR P EF Q+DME+S
Sbjct: 188 PSRVHPGCFYALPQSPQLYKQLLMCSGFDRYIQIAKCYRDEDLRADRQP-EFTQVDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ DD+++  E +L+ +F+E  + + V     R+ + +A+ RYG+DKPD R  + + +V
Sbjct: 247 FVDVDDVIDVNERLLKALFKEILDVD-VQLPIQRMTWIEAMNRYGSDKPDTRFGMELIDV 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+      F VF+   ++  G  V  +  KG G   R   D++ + A+  G  GLAYI  
Sbjct: 306 TDVVKGCGFGVFTG--TIENGGSVRGLNVKGQGAMPRKKIDKLVDSAKGNGAKGLAYI-- 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G +      AK +     + +   +D Q GD   F A       +     R  +A
Sbjct: 362 AMHEDGTIK--SSFAKFMTDEEMDNLIKAMDGQPGDLLVFAADKNKIVWNVLGALRLELA 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +I+ + F F W+++FP +EW++E+ +    H+PFTMP         +D   ++A  
Sbjct: 420 EQLDLIDKSKFNFLWVVEFPQFEWSDEQNRFLAMHHPFTMPMDEDLDYIESDPGRVRAKA 479

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R H ++V  +    +G + E    +FG L  AF+ G+PPH G+A 
Sbjct: 480 YDIVLNGSEIGGGSVRIHQADVQERMLKALGFTTEAAHEQFGFLLDAFKYGVPPHAGLAY 539

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G+DR+VM + G  N+REV  FP  ++   L+  +P+ V  +QL EL +  ++
Sbjct: 540 GLDRLVMHMTGEDNIREVIAFPKVKDASCLMTEAPTAVDAKQLEELSIETID 591


>gi|307721114|ref|YP_003892254.1| aspartate--tRNA(Asn) ligase [Sulfurimonas autotrophica DSM 16294]
 gi|306979207|gb|ADN09242.1| aspartate--tRNA(Asn) ligase [Sulfurimonas autotrophica DSM 16294]
          Length = 584

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 233/600 (38%), Positives = 341/600 (56%), Gaps = 25/600 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH C DL  ++VG  V L+GW +  R HGGIIF+D+RD  G+ Q+  +P+ +    ++A
Sbjct: 2   RTHYCTDLNETNVGEDVVLTGWANNYRDHGGIIFIDLRDKTGLIQLTCDPEDSKEAHKVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL   G V  R     N  + TG IE+    + I + +  +P  V G++   E
Sbjct: 62  NDVRDEYVLIAKGKVRLRGEGLTNPRLKTGAIEIVVTDLVIENKSAPVPF-VIGDKNVGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+L+LR   + +    R++   + R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 121 ETRLKYRYLELRDPDMFEVFRLRSKAAIAARNILDENGFLEVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHNGEFYALPQSPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+D++   E++L  +F   + G  V   F RI + +A+  YG+DKPDLR  + M +V
Sbjct: 240 FCNQEDVIKVAEDLLVAMFG--ACGVDVKPPFNRITHKNAMEWYGSDKPDLRYDLKMVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGLAY 358
            + F   +  +F+ I        + A+  K  G +  F  R      ++ R  G  GL Y
Sbjct: 298 IDIFERCDNEIFTNIAKKPHVNRIKAL--KVPGADLVFSKREMKSFEDYVRKFGAHGLGY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
             +++ E G     GP+ K  +  +   I  R +++ GD  FF AGD      +    RN
Sbjct: 356 --FQMKEDGL---KGPLTKFFSEEDIALIIERTELEVGDVVFFGAGDKKTVWDYMGRFRN 410

Query: 419 HIA--QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            IA  +++ +I+ N +EF W++DFP +E   E+ ++   H+PFTMP+        +D+  
Sbjct: 411 FIAEHEKMNLIDENAYEFVWVVDFPMFEV--EDGRVKALHHPFTMPK----DTDKDDVEE 464

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I++  YD+V NG E+  G IR H  E+  + F  +GI +E  + +FG L  A + G PPH
Sbjct: 465 IESIAYDIVLNGTELGGGSIRIHKEEIQEEVFKLLGIEEEEAQEKFGFLLDALKFGAPPH 524

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG A G DR++MLL    ++R+V  FP +Q    LL  +PS V   QLR+L +R+ E  K
Sbjct: 525 GGFALGFDRLIMLLTKKSSIRDVIAFPKTQKASCLLTKAPSPVDNTQLRDLHIRLREQVK 584


>gi|237744013|ref|ZP_04574494.1| aspartyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229431242|gb|EEO41454.1| aspartyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 592

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 233/601 (38%), Positives = 349/601 (58%), Gaps = 30/601 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANP---DSACF 59
           YRTH+ G+L + ++G  V LSGWV   R     + F+D+RD  G TQ+V N         
Sbjct: 3   YRTHNLGELRLKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNVLLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NLNIPTGEIEVFAKEIEILNACDTLPFQISGIDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  + G   +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P      +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKIISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L   G  +   P+AK L+    +AI  +   + GD  F +A       S     R
Sbjct: 359 YI--KLTADGITS---PIAKFLSEDEMKAIIEKTQAKTGDVIFIVADKKKVVVSALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT       S+K  DL   
Sbjct: 414 LKIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDLDKF 466

Query: 478 KAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
            A Q        YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF
Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFGFFLDAF 526

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL +
Sbjct: 527 KYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFI 586

Query: 590 R 590
           +
Sbjct: 587 K 587


>gi|227538291|ref|ZP_03968340.1| aspartate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241806|gb|EEI91821.1| aspartate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 587

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/591 (38%), Positives = 332/591 (56%), Gaps = 16/591 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
           +RTH+CG+L +SD+G  V LSGWV + R  GG+ F+D+RD YGITQ+  N D        
Sbjct: 2   HRTHTCGELRISDLGKSVTLSGWVQKSRDLGGMTFIDVRDRYGITQLTFNADDNEQLRAS 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +  E+V+ ++G V+ RS++  N+ I TG IE+    +EIL+ ++  P  +  E +  
Sbjct: 62  ARELGREYVIKVEGQVIERSSK--NSKIPTGDIEIKVSSLEILNASKLPPFTIEDETDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R K+R+LDLRR+ + +N++ R ++   +R  +  +NF+E  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKFRYLDLRRNPVRQNLILRHKLAQEIRRYLDEQNFLEVETPVLIKSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNAGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DILN  E + + +F+        S    R+ Y DA+R YG+DKPD R  +    
Sbjct: 239 SFVEQEDILNMFEGLAKHLFKTVKGFELGS--VPRMTYADAMRLYGSDKPDTRFGMQFVE 296

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360
           + E      F VF +         V  I A G  G  R   D + ++ +         ++
Sbjct: 297 LNELTKGKGFPVFDQ------AELVVGINANGCAGYTRKQLDALTDYVKRPQVGATGLVY 350

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R +E G +     V K       +      D + GD    +AG   K      + R  +
Sbjct: 351 ARYNEDGTIK--SSVDKFYTEEQLKEWAAAFDGKPGDLFLIMAGPTDKVRKQLNELRLEV 408

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +LG+ + N F   W++DFP  EW+EE  +    H+PFT P+     L   +   ++A 
Sbjct: 409 GNQLGLRDKNKFAPLWVLDFPLLEWDEESGRYHAMHHPFTSPKPEDIPLLDTNPGEVRAN 468

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD V NG EI  G IR H  E+    F ++G + E  + +FG L  AF  G PPHGG+A
Sbjct: 469 AYDFVLNGSEIGGGSIRIHDKELQSLMFRHLGFTPEDAQKQFGFLMEAFTYGAPPHGGLA 528

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G DR+V +  G   +R+V  FP + +  D+++ +P+T+   QL EL L +
Sbjct: 529 FGFDRMVSVFAGLDTIRDVIAFPKNNSGRDVMIDAPATIDQAQLDELNLAL 579


>gi|81428474|ref|YP_395474.1| aspartyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|97196706|sp|Q38XB6|SYD_LACSS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78610116|emb|CAI55165.1| Aspartyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 590

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 222/592 (37%), Positives = 337/592 (56%), Gaps = 13/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEI 61
           + RT   G +  + VG  V L GWV + R  G +IF+D+RD  G+ Q+V N D+A    +
Sbjct: 2   KTRTTYSGLVDETFVGQTVTLHGWVQKRRSLGNLIFVDLRDREGLVQLVFNQDNADILAL 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A ++R+E+V+ + G+V +R    IN ++ TG++E+   ++ IL+ A+ LP  +       
Sbjct: 62  ANTLRNEYVIEVTGMVQARDEAAINPDMKTGKVEVIVSELTILNEAKNLPFEIKDGITTS 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  + KYR+LDLRR  + + I++R++I  +    +    F+   TP LT S+PEGARD+L
Sbjct: 122 EETKLKYRYLDLRRPEMQQAIIRRSQITQAAHKYLDNNGFLNIETPDLTRSTPEGARDYL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  GSFYALPQ+PQ +KQLLM +GFDRY+Q+A CFRDED R DR P EF Q+D+E 
Sbjct: 182 VPSRVYPGSFYALPQSPQVFKQLLMDAGFDRYYQMARCFRDEDLRGDRQP-EFTQIDVET 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+  ++I    E +++ V ++  + + V   F R+ + +A+ RYG+DKPD+R  + + +
Sbjct: 241 SFMSAEEIQEQAEGIIKQVMQDVMHID-VPTPFKRMKWQEAMDRYGSDKPDIRFDLEIQD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           +TE    S F+VFS   + N G  V AI  P      +R   D   E+ +  G  G+A  
Sbjct: 300 LTEMMKTSSFKVFSD--TANSGNLVRAIVVPEGAAKYSRKMLDEQTEYIKRYGARGMA-- 355

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            W     G +   GP AK L     E +   L  +DGD   F+A      C      R H
Sbjct: 356 -WVKVVDGELT--GPAAKFLKEQEAELLSA-LSAKDGDLVLFVADKFQVVCDSLGYLRKH 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A ++G+++ + F + W++D+P +E++E   +   AH+PFT P      L   D     A
Sbjct: 412 FAHDMGLVDESQFAYLWVVDWPLFEYDEGFGRWIAAHHPFTRPNDSDVDLLETDPHKAHA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD++ NG+E+  G +R +  ++  + F  +GIS E  E +FG L  A   G PPHGG 
Sbjct: 472 QSYDIILNGYELGGGSLRIYQRDIQERMFKALGISPETYEEQFGHLLSAMDYGFPPHGGF 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR  MLL G  N+R+V  FP + +  + +  +PS V+  QL ELGL +
Sbjct: 532 AIGLDRFAMLLAGRDNIRDVIAFPKNSHASEPMTNAPSRVAPAQLDELGLEV 583


>gi|260912897|ref|ZP_05919382.1| aspartate-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260632887|gb|EEX51053.1| aspartate-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 598

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 228/599 (38%), Positives = 345/599 (57%), Gaps = 11/599 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFE 60
           H  RTH CG L   ++G  V+LSGWVHR R  GG+IF+D+RD  GI QV  +P       
Sbjct: 8   HMMRTHYCGALNSHNIGQEVKLSGWVHRRRDLGGLIFIDMRDREGIVQVYFDPKYQEALN 67

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +R+E+ + I G V++R    IN N+ TG+IE+ A+ + I + AE LPL     +  
Sbjct: 68  AAAGLRNEFCIQIQGEVIARPENQINKNMATGEIEVLAKSLSIYNTAESLPLDF--NQNN 125

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+
Sbjct: 126 TEEQRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDY 185

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 186 LVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVE 244

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+   ++   ME ++RG++ + +  +     F  + + DA+RR+G+DKPDLRNP+ M 
Sbjct: 245 TSFLTASEVREIMEKMVRGLWLDIAGVDL--GKFPVMTFADAMRRFGSDKPDLRNPLEMV 302

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           +V +     EF+VF+   + +P   +  I    G    R   D   ++    G  GLA++
Sbjct: 303 DVADLLKEVEFKVFNGPAN-DPNGRIAVIRVPNGTDITRKQIDEYTQFVSIYGAKGLAWL 361

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
                 +G      P+AK L+    +A+  R+  Q+GD  FF   D  K  + A  A R 
Sbjct: 362 KVNDLAAGMEGIQSPIAKFLSENVLKALLERVQAQNGDILFF-GADTYKVTTDAMGALRL 420

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++LG+   + ++  W++DFP +E  ++E  +   H+PFT P+         D  S  
Sbjct: 421 KLGRDLGLTKLDEWQPLWVIDFPMFE-RDDEAGLAAMHHPFTSPRDFSPEQLEADPTSAV 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R    ++    FS +GI++E    +FG L  A + G PPH G
Sbjct: 480 ANAYDMVINGYEVGGGSVRIFEPKMQQAVFSILGINEEEQREKFGFLLDALKFGTPPHAG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DR+ MLL G  N+R+V  FP +     L+  +PS  + + L EL + +++  K+
Sbjct: 540 LAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTDAPSYANPQALNELAISVIKELKE 598


>gi|45657956|ref|YP_002042.1| aspartyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|59798555|sp|Q72QK5|SYD_LEPIC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|45601197|gb|AAS70679.1| aspartyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 601

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/601 (39%), Positives = 337/601 (56%), Gaps = 20/601 (3%)

Query: 4   YRTHS-CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           Y+  S  G+L  S  G  + L GW  R R  GG+IF+D+RD  GI QVVA  +     F 
Sbjct: 9   YKNRSWAGELNESQEGKQIVLFGWSFRFRDQGGVIFIDLRDRTGIIQVVARKELLGDSFT 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ VRSE+VL + G +  R  E+IN  + TG IE+   ++EIL+VA+  P  +    E 
Sbjct: 69  LAEKVRSEYVLAVRGTLKKRDLESINPRMQTGTIEVVLDQLEILNVAKTPPFSLDEFDEV 128

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E ++ KYR+LD RR+ L   ++KR   I ++R  +    F+E  TPIL  S+PEGARDF
Sbjct: 129 SEELKLKYRYLDFRREELKNRMIKRHEFIFAIRNYLNKRKFVEIETPILNKSTPEGARDF 188

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N   FYALPQ+PQ +KQ+LM  G +RYFQI  CFRDED R+DR P EF QLDME
Sbjct: 189 LVPSRLNPNQFYALPQSPQIFKQILMVGGMERYFQIVKCFRDEDLRADRQP-EFTQLDME 247

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SFV Q++IL+ +E ++  +++E  N   +S  F R+ Y+ A+  YG+DKPDLR  + + 
Sbjct: 248 FSFVSQEEILSEIEGLVETIYKEVFNIQ-LSIPFPRMTYNTAMEEYGSDKPDLRFGMKLV 306

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA-RSQGQPGLAYI 359
           +V+E     +F VF+  +      +V  +P  G   +R   +    W  R     GLAY+
Sbjct: 307 DVSEIVKDCDFNVFAGAVKNGGTVKVVCVPG-GSIISRKEIEDYTAWLNRDYKAKGLAYM 365

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                + G       + K       EAI      ++GD  FF A +           R  
Sbjct: 366 -----KHGTEGLESTITKRFKKEELEAISKACGSKEGDMLFFGADEREIVNHSLGALRLK 420

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-------GMESLKGN 472
           +++       N     WI+DFP +EWN++ K+ D  H+PFT P          ME+L+ N
Sbjct: 421 LSERFETPKENEINITWIVDFPMFEWNKDHKRWDALHHPFTSPSDESIPFFESMETLQKN 480

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
              +  A  YDLV NG EI  G IR H  E+  + F  +GI++E  + +FG L  A + G
Sbjct: 481 -AGNATAKAYDLVMNGVEIGGGSIRIHSKEIQNKVFQVLGINEEEAKEKFGFLLEALEFG 539

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG+A GIDR++MLL G K++R+V  FP +Q    L+   PS V  +QL+EL +++ 
Sbjct: 540 APPHGGLAFGIDRMLMLLTGGKSIRDVIAFPKTQKGLCLMSECPSPVEEKQLQELKIKLA 599

Query: 593 E 593
           +
Sbjct: 600 K 600


>gi|300769899|ref|ZP_07079778.1| aspartate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762375|gb|EFK59192.1| aspartate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 587

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/591 (38%), Positives = 332/591 (56%), Gaps = 16/591 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
           +RTH+CG+L +SD+G  V LSGWV + R  GG+ F+D+RD YGITQ+  N D        
Sbjct: 2   HRTHTCGELRISDLGKSVTLSGWVQKSRDLGGMTFIDVRDRYGITQLTFNADDNEQLRAS 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +  E+V+ ++G V+ RS++  N+ I TG IE+    +EIL+ ++  P  +  E +  
Sbjct: 62  ARELGREYVIKVEGQVIERSSK--NSKIPTGDIEIKVSSLEILNASKLPPFTIEDETDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R K+R+LDLRR+ + +N++ R ++   +R  +  +NF+E  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKFRYLDLRRNPVRQNLILRHKLAQEIRRYLDEQNFLEVETPVLIKSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNAGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DILN  E + + +F+        S    R+ Y DA+R YG+DKPD R  +    
Sbjct: 239 SFVEQEDILNMFEGLAKHLFKTVKGFELGS--VPRMTYADAMRLYGSDKPDTRFGMQFVE 296

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF +         V  I A G  G  R   D + ++ +         ++
Sbjct: 297 LNKLTKGKGFPVFDQ------AELVVGINANGCAGYTRKQLDALTDYVKRPQVGATGLVY 350

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R +E G +     V K       +      D + GD    +AG   K      + R  +
Sbjct: 351 ARYNEDGTIK--SSVDKFYTEEQLKEWAAAFDGKPGDLFLIMAGPTDKVRKQLNELRLEV 408

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +LG+ + N F   W++DFP  EW+EE  +    H+PFT P+     L   +   ++A 
Sbjct: 409 GNQLGLRDKNKFAPLWVLDFPLLEWDEESGRYHAMHHPFTSPKPEDIPLLDTNPGEVRAN 468

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD V NG EI  G IR H  E+    F ++G S E  + +FG L  AF  G PPHGG+A
Sbjct: 469 AYDFVLNGSEIGGGSIRIHDKELQSLMFKHLGFSPEDAQKQFGFLMEAFTYGAPPHGGLA 528

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G DR+V +  G   +R+V  FP + +  D+++ +P+T+   QL EL L +
Sbjct: 529 FGFDRMVSVFAGLDTIRDVIAFPKNNSGRDVMIDAPATIDKAQLDELNLAL 579


>gi|229817226|ref|ZP_04447508.1| hypothetical protein BIFANG_02486 [Bifidobacterium angulatum DSM
           20098]
 gi|229785015|gb|EEP21129.1| hypothetical protein BIFANG_02486 [Bifidobacterium angulatum DSM
           20098]
          Length = 599

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 237/605 (39%), Positives = 346/605 (57%), Gaps = 39/605 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V LSGWV R R HGG+ F+D+RD  G+ QVV   +    E A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLSGWVDRRRDHGGVAFIDLRDSSGLVQVVIYDE----EQAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117
            +RSE+V+ + G V  R     N ++ TG+IE+ A+ I++L+ ++ LP  V        E
Sbjct: 62  PLRSEFVIQVTGEVRLRPEGNENEHLATGKIEVVAESIDVLAKSDALPFQVSTALENESE 121

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR  +  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEEVRLKYRYLDLRRPGMQSNLKLRSDMAKAARHALEDLDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQFARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294
           LDMEM++V+Q+D++   E V+  +++  + G  V     RI + +A+ +YG+DKPDLR  
Sbjct: 241 LDMEMAYVDQEDVMAMAEKVIAAIWK--AAGYEVQLPLPRITWQEAMDKYGSDKPDLRFG 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353
           NPII   +T++F ++ FRVF           V A+  KGG    R   D   EWA+ +G 
Sbjct: 299 NPII--ELTDYFKNTPFRVFQAPY-------VGAVLFKGGASTPRRQFDAWQEWAKQRGA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAY+ +  D  G +   GPVAK+L+      ++  +  +DGD+ FF AG         
Sbjct: 350 KGLAYVQFTAD--GEL--KGPVAKNLSDEERAGLKEAVGAEDGDAVFFAAGARESSQLLL 405

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464
             AR  +A   G+++   F F W++DFP ++  ++    D A         H+PFTMP  
Sbjct: 406 GAARVELASRAGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D     +  YD+VCNG E+  G +R H  ++  +  + +GISKE  E++FG 
Sbjct: 466 DWIDKFDQDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQDRVLNVLGISKEEAEDKFGF 525

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPH GIA G DR V +L GA ++R+V  FP +    D L G+P+ +S EQ 
Sbjct: 526 LLEAFKYGAPPHAGIALGWDRTVSILAGAPSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585

Query: 585 RELGL 589
            E G+
Sbjct: 586 AETGV 590


>gi|167901359|ref|ZP_02488564.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 600

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/601 (39%), Positives = 338/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+  + G  +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKT-TIGVELDATFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   QDGD  FF A D  K  + +  A       
Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++EE +   AH+PFT P+         D    
Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+   E P
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598

Query: 596 K 596
           K
Sbjct: 599 K 599


>gi|182414291|ref|YP_001819357.1| aspartyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|238692909|sp|B1ZSW8|SYD_OPITP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|177841505|gb|ACB75757.1| aspartyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 595

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 234/603 (38%), Positives = 347/603 (57%), Gaps = 26/603 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           +RTH C  L  S +G+ V L GWV  +R  GGIIF+D+RD  GITQ+   P  ++   E 
Sbjct: 2   HRTHHCAQLTTSQLGATVSLLGWVDTIRDQGGIIFVDLRDRKGITQIQLEPHENAKLAEQ 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGERE 119
            K ++ E V+ I G V+ R A T N  + TG++E+ A  +EI ++++  P P+   G  +
Sbjct: 62  VKQLKPESVIGITGKVVRRPAGTENPALPTGEVEVVASSLEIHNISDTPPFPLDDAGGDK 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R  YR+LDLRR  + KN+  R R   S+R    A+ FIE  TP L  S+PEGAR+
Sbjct: 122 VNEDLRLTYRYLDLRRPKMRKNLQVRHRAAKSIRDYFDAQEFIEVETPALFKSTPEGARE 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR++ G FYAL Q+PQQ+KQ+LM +G ++YFQIA CFRDED R+DR   EF Q+D+
Sbjct: 182 YLVPSRIHPGQFYALSQSPQQFKQILMVAGVEKYFQIARCFRDEDLRADRQ-MEFTQVDV 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SFV ++DI    E +L+ V+++  + + +   F R+ + DA+ RYG DKPD+R  + +
Sbjct: 241 EASFVTREDIYALFEGMLKKVWKDVLDVD-IPTPFPRMAFHDAMNRYGVDKPDVRFALEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAY 358
            + +E F +S F+VF    +V  G  V A+ AKG     +     M + A+S G  GLA+
Sbjct: 300 ADFSELFKNSAFKVFQS--TVAGGGVVKALNAKGLADLTQGELKSMEDTAKSLGAKGLAF 357

Query: 359 IFWRLDESGNVAG---MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           I         V G     P+ K         +  RL++++GD  FF A    K C+    
Sbjct: 358 I--------KVEGGEWKSPIVKFFTEPEKAELTKRLNIEEGDIIFFAAAPWEKACAILGR 409

Query: 416 ARNHIA---QELG--IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
            R   A   Q+ G   I  + ++F W++DFP   ++E E +    H+PFT P        
Sbjct: 410 LRLESAAFLQKRGKLTIRHDDWQFLWVIDFPLMTYDEAENRYVATHHPFTAPVPDDTQYL 469

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLYRAF 529
            +D   ++   YD+V NG E+  G IR H   +  + F +V  I ++VVE+RFG + +AF
Sbjct: 470 DSDPKKVRGQHYDVVLNGMELGGGSIRIHQPVLQKKVFEDVLKIPQDVVESRFGYMLKAF 529

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
             G PPHGGIA G+DR+V LL G  ++R+V  FP +Q   DL+  SP+ V+  QL++L +
Sbjct: 530 TYGAPPHGGIAFGLDRMVALLCGTTSIRDVIAFPKTQKGQDLMAQSPTPVTPRQLKDLHI 589

Query: 590 RIV 592
           + V
Sbjct: 590 QTV 592


>gi|255526676|ref|ZP_05393581.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296187181|ref|ZP_06855578.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255509656|gb|EET85991.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048216|gb|EFG87653.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 591

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 234/593 (39%), Positives = 351/593 (59%), Gaps = 19/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  + VG+   + GWV R R  GG+ F+D+RD  GI QVV   +     FE A
Sbjct: 10  RTIMCGELRETHVGNKYTVMGWVQRRRNLGGLEFVDLRDRSGILQVVFGEEINKEAFEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +VRSE+ + + G ++ R  E  N ++ TG +EL  + I+ILS +E  P+ +    +  E
Sbjct: 70  NTVRSEYCIAVTGTLVKR--EAANKDLPTGMVELKGESIKILSESETPPIYIKENLDAAE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR  + K  + R +    +R  +    F+E  TPIL  S+PEGARD+LV
Sbjct: 128 NIRLKYRYLDLRRPDMQKIFMIRHKAGKVVRDFLDQNGFLEMETPILGKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FYALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNFPGKFYALPQSPQLFKQLLMVSGYDRYFQIAKCFRDEDLRANRQP-EFTQIDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE+DD++   E +++ VF+E + G  V     R+ Y  A+ +YG+DKPDLR  + ++++
Sbjct: 247 FVEEDDVMELNERLVQKVFKEIA-GVDVKLPIERMPYKVAMEKYGSDKPDLRFGMEINDI 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +E     +F+VF   L+   G  V AI A       R   D++ ++ ++ G  GL ++ +
Sbjct: 306 SETVKDIDFKVFQDALA--NGGSVRAIKAPNCASMGRKQIDKLVDFVKTYGAKGLVWVAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           + D          +AK +N   T+A+  ++  + GD    +A  + + F S  A  R H+
Sbjct: 364 KED-----GIKSSIAKFMNEEQTKAVLDKIQAKVGDLVLVVADKNSVVFQSLGA-LRLHM 417

Query: 421 AQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           A+E GI+ N N + F W+ +FP + +NEEE++    H+PFT P         +D   ++A
Sbjct: 418 AKETGILENNNEYRFVWVTEFPLFSYNEEEQRFQAEHHPFTAPMDEDIQYLESDPGRVRA 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H  ++  +    +G ++E   N FG L  AF+ G PPHGG+
Sbjct: 478 KAYDIVLNGEELGGGSIRIHDIKLQEKMLKVLGFTEERAWNSFGFLLEAFKFGAPPHGGL 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRI 591
           A G DR++M L G +N+++V  FP +QN FC  L  +P+ V   Q++ELG+ I
Sbjct: 538 AYGFDRMIMFLAGTENIKDVIAFPKNQNAFCP-LTEAPNVVEETQIKELGINI 589


>gi|87300554|ref|ZP_01083396.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87284425|gb|EAQ76377.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 606

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 225/601 (37%), Positives = 344/601 (57%), Gaps = 24/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H CGDL  S V   V LSGWV R R HGG+IF+D+RD  G  Q+  +PD     F +A
Sbjct: 2   RSHGCGDLRSSSVDQVVELSGWVDRRRDHGGVIFVDLRDRSGTVQITVDPDLGPEAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119
           + +R+E V+ + G V  R  E++N  + TG++E+ A ++ +L +V + LP PV    E  
Sbjct: 62  EHLRNETVVQVQGRVRLRPQESLNTRLATGEVEVLASQLTVLNAVRKPLPFPVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR+ ++ N+  R R I + R  +  + FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRERMNGNLRLRARTIQAARRFLEDQGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YLVPSRVCGGEWFALPQSPQLFKQLLMVGGLERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ Q++IL   E ++  +++    G  +   F R+ + +A+ RYGTD+PD R  + +
Sbjct: 241 EMSFMGQEEILELNEALIASIWKAV-KGVELPRPFPRLSWHEAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE----WARSQGQP 354
            NV++      F+VFS  ++     +  A+P    GGN A  + R+      ++ +Q   
Sbjct: 300 TNVSDLVAGMGFKVFSGAVAAGGSVKCIAVP----GGNEALSNVRIKPGGDVFSEAQAAG 355

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
                F R+ E G +  +G +  +L+      +  R     G    F AGD         
Sbjct: 356 AGGLAFIRVREGGEIDTIGAIKDNLSADTKAELLARTGAVPGTLLLFGAGDTATVNKALD 415

Query: 415 DARNHIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGM 466
             R ++A+ELG++    + + + F W++DFP +E+N  E +++  H+PF  P     G  
Sbjct: 416 RVRQYLARELGLVPADRDNDTWNFLWVVDFPMFEFNAGENRLEALHHPFCAPNPDDLGND 475

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
            +     L + +A  YDLV NG E+  G +R H S +  Q    +G+  E  E +FG L 
Sbjct: 476 PAQWAETLPTARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTIGLPLEEAERQFGFLM 535

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            A   G PPHGG+A G+DR+VMLL G +++R+   FP +Q    LL  +P+ V+ +QL +
Sbjct: 536 EALDLGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFPKTQQARCLLTQAPAGVAPQQLED 595

Query: 587 L 587
           L
Sbjct: 596 L 596


>gi|217420222|ref|ZP_03451728.1| aspartate--tRNA ligase [Burkholderia pseudomallei 576]
 gi|217397526|gb|EEC37542.1| aspartate--tRNA ligase [Burkholderia pseudomallei 576]
          Length = 600

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/601 (39%), Positives = 338/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F + + G  +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIF-KMTIGVELDATFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   QDGD  FF A D  K  + +  A       
Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++EE +   AH+PFT P+         D    
Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+   E P
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598

Query: 596 K 596
           K
Sbjct: 599 K 599


>gi|317507127|ref|ZP_07964887.1| aspartyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254573|gb|EFV13883.1| aspartyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 599

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 239/597 (40%), Positives = 334/597 (55%), Gaps = 29/597 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L  S +G+ V L+GWV R R HGG+IF+D+RD  G+ QVV   D    E A +
Sbjct: 2   RTHLAGELRESHIGTDVALTGWVSRRRDHGGVIFVDLRDKSGLAQVVFR-DGDVLERAHA 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ L I+G+V  R   + N  + +G +E+     E+LS +  LP P+  +    E  
Sbjct: 61  LRAEYCLKINGVVDRRPEGSENPALGSGAVEVGVTSFEVLSESAPLPFPL--DEPSGEET 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           RF YR+LDLRR    + +  R+ +  + R  ++ + FIE  TP LT S+PEGARDF+VP+
Sbjct: 119 RFHYRYLDLRRPEAAQILRLRSTVNAAARQTLLDQGFIEVETPTLTRSTPEGARDFIVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G++YALPQ+PQ +KQLLM  G +RYFQ+A C+RDED R+DR P EF QLD+EMSFV
Sbjct: 179 RLKPGNWYALPQSPQLFKQLLMVGGVERYFQLARCYRDEDFRADRQP-EFTQLDLEMSFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            QDD++   E+V+  V+     G        RI Y++A+RRYG+DKPDLR  + + + TE
Sbjct: 238 TQDDVIALAEDVVAAVWGLL--GEEPQLPLPRITYEEAMRRYGSDKPDLRFGVELVDCTE 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+   GG    R   D   +WAR +G  GLAY+   +
Sbjct: 296 YFKDTPFRVFQ-------AEHVGAVVMPGGADQPRRTLDGWQDWARQRGAKGLAYVL--I 346

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G ++  GPV+K+L+    + +   +  + GD  FF AGD     S    AR  IA  
Sbjct: 347 GDDGELS--GPVSKNLSEAERDGLAAHVGARPGDCVFFAAGDAKSARSLLGAARCEIAAR 404

Query: 424 LGII-NCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGN 472
           LG+I +   + F W++DFP  E   + K   D A         H+ FT P     +    
Sbjct: 405 LGLIADGPKWAFAWVVDFPLLEPAAQAKAAGDVAVGEGAWTAVHHAFTAPTEESLATLEA 464

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D  S  +  YDLVCNG EI  G IR H  EV  +    +G  ++  +  FG L  AF  G
Sbjct: 465 DPGSALSQAYDLVCNGHEIGGGSIRIHRREVQERVLKLMGFDEDRAQAAFGFLLDAFAYG 524

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            PPHGG+A G DRI  LL G  ++REV  FP S    D L G+P  ++  Q  E G+
Sbjct: 525 APPHGGMAFGWDRITALLAGVDSIREVIAFPKSGGGQDPLTGAPGPITPAQRAETGV 581


>gi|108761988|ref|YP_632850.1| aspartyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108465868|gb|ABF91053.1| aspartyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 606

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/597 (38%), Positives = 344/597 (57%), Gaps = 16/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH+CG L  ++VG  V L GWVH  R HGG +F+D+RD  G+TQVV  PD A    +A 
Sbjct: 11  RTHTCGQLTATNVGEEVVLFGWVHNRRDHGGAVFIDLRDRDGLTQVVFEPDHAEAHALAG 70

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R E+ + + G V+SR  + +N  + TG+IE+ A  + I + +E  P PV    +  E 
Sbjct: 71  SLRLEYCVGVRGKVVSR-GKNVNPKMKTGEIEVRASDLTIFNRSEPTPFPVEDSIDTSEE 129

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +RFLDLRR  L  +++ R+++    R  M+   F+E  TP +   +P GAR+FLVP
Sbjct: 130 KRLAHRFLDLRRAPLQHSLMTRSKMNALTRSYMVGNGFLELETPFMGKYTPGGARNFLVP 189

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+N G FYAL ++PQ YKQL M +GFDRYFQI  CFRDED R DR P EF Q+D+EMSF
Sbjct: 190 SRLNAGKFYALAESPQLYKQLFMVAGFDRYFQIVKCFRDEDLRVDRQP-EFTQIDVEMSF 248

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR----NPIIM 299
           V QDDI   +E +L+ ++ E   G  +   F+R+ + +++ +YG DKPDLR    + ++ 
Sbjct: 249 VTQDDIFTMIEGLLKKLWGEVL-GIDIPTPFMRMDFYESMAKYGNDKPDLRFGLEHVVLT 307

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             + EH       +  + +      +   +PA+    +RA  D++ E+A+  G  GLA  
Sbjct: 308 DLIREHGEGGGVPMIWEAVQNKGIVKAMVVPAE-KAMSRAESDKLEEFAKQAGAKGLARA 366

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ + G      P++K ++    +AI   +  + GD   F  G      +  A+ R H
Sbjct: 367 --KVADGGEWT-QSPLSKTISPALRQAINQAVGAKTGDLLLFQFGKEALVHTVMANLRVH 423

Query: 420 IAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           +A++LG+I    +   ++F W+++ P +E+++E      AH+ FT P     +    D  
Sbjct: 424 VAKKLGLIPEYGSGGQWKFLWVVNPPLFEYDDETNTWAAAHHAFTRPHDEDVAYLLTDPG 483

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            +K  +YD+V NGFEI  G IR H  +V  + F  +GIS E    +FG L  A + G PP
Sbjct: 484 RVKCHRYDVVLNGFEIGGGSIRLHDPKVQAEVFKALGISDEDARAKFGFLLDALKFGAPP 543

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           HGGIA G+DR+ MLL GA+++R+V  FP S+   DL+ G+P  V   QLRE+ +R V
Sbjct: 544 HGGIALGMDRLAMLLTGAESLRDVIPFPKSKTGTDLMTGAPGDVDDRQLREIHVRPV 600


>gi|294782756|ref|ZP_06748082.1| aspartate--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294481397|gb|EFG29172.1| aspartate--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 592

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 241/604 (39%), Positives = 354/604 (58%), Gaps = 36/604 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+  +L V ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLAELRVKNIGETVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NPNIPTGDIEVFAKEIEILNACDTLPFQISGIDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TPILT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMINNLKMRHRMIMSIRNYMDQAGFLDVDTPILTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  + G   +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFAVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQ-GQPG 355
           + ++++   +S F  FS   +V  G  V AI  P+     +R       E+ ++  G  G
Sbjct: 299 LKDLSDIVKNSSFNAFSS--TVQNGGLVKAIVAPSANEKFSRKIISEYEEYVKTYFGAKG 356

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI     + G      P+AK L     +AI  + + + GD   FI  D  K  + A  
Sbjct: 357 LAYI-----KLGADGISSPIAKFLTEDEMKAIIEKTEAKTGD-LIFIVADKKKVVAAALG 410

Query: 416 A-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           A R  I ++L +IN + F+F W++DFP ++++EEE++    H+PFT       S+K  DL
Sbjct: 411 ALRLRIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDL 463

Query: 475 LSIKAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
               A Q        YDLV NG EI  G IR    ++    F  +G+S+E  + +FG   
Sbjct: 464 DKFLAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFI 523

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            AF+ G PPHGG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL E
Sbjct: 524 DAFKYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDDKQLEE 583

Query: 587 LGLR 590
           L ++
Sbjct: 584 LFIK 587


>gi|124024643|ref|YP_001018950.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|166225374|sp|A2CDX5|SYD_PROM3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123964929|gb|ABM79685.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 606

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 237/609 (38%), Positives = 347/609 (56%), Gaps = 40/609 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R++SCG+L    + S V+L GWV R R HGG+IF+D+RD  G  Q+  +PD     F  A
Sbjct: 2   RSNSCGELRSKHIASNVQLCGWVDRCRDHGGVIFIDLRDRSGTIQITVDPDQGAELFASA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYP 121
           +S+R+E VL I GLV  R A+ IN+ + TG+IE+ A  +E+L+ V   LP  V    E P
Sbjct: 62  ESLRNETVLQITGLVRPRPADAINSKLSTGEIEVLADGLEVLNPVTGNLPFTVSIHDEEP 121

Query: 122 --ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R LDLRR+ + +N+  R   I + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 VKEELRLRHRHLDLRRERMSRNLQLRHTTIKTARRFLEDEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YLVPSRVCSGEWFALPQSPQLFKQLLMVGGLERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q+ IL   E ++  +++    G  +   F R+ + +A+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQEQILKLNERLIATIWKAV-KGIDLPLPFPRLTWHEAMDRYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP----------AKGGGGNRAFCDRMNEWAR 349
           ++V++      F+VFS  ++     +   +P           K GG      D  NE A+
Sbjct: 300 NDVSDILKDMGFKVFSGAIAAGGSVKCITVPNGNDLISNVRIKPGG------DIFNE-AQ 352

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
             G  GLA+I  R+ +S  +  +G +  +LN     A+  +   + GD   F AG     
Sbjct: 353 KAGAGGLAFI--RVRDSDEIDSIGAIKDNLNSKQKTALLKQTGAKAGDLILFGAGKTATV 410

Query: 410 CSFAADARNHIAQELGIINCN----CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
            S     R  + +ELG+I  +     ++F W++DFP +E N EE +++  H+PF  P   
Sbjct: 411 NSALDRVRQFLGRELGLIPTDQDNKLWQFLWVVDFPMFELNAEENRLEALHHPFCAPN-- 468

Query: 466 MESLKGND-------LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
            +   GND       L   +A  YDLV NG E+  G +R H +E+  Q    +G+  E  
Sbjct: 469 -KDDLGNDPDAWMERLPQARAQAYDLVLNGLELGGGSLRIHNAELQRQVLQTIGLPLEEA 527

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
             +FG L  A + G PPHGG+A G+DRIVMLL G  ++R+   FP +Q    L+  +P+ 
Sbjct: 528 NQQFGFLIDALEMGAPPHGGLAFGMDRIVMLLTGEDSIRDTIAFPKTQQARCLMTQAPAG 587

Query: 579 VSVEQLREL 587
           VS  QL EL
Sbjct: 588 VSNHQLEEL 596


>gi|253989953|ref|YP_003041309.1| aspartyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211639066|emb|CAR67679.1| aspartyl-trna synthetase (ec 6.1.1.12) (aspartate--trna ligase
           (asprs) [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253781403|emb|CAQ84566.1| aspartyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 590

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 224/590 (37%), Positives = 346/590 (58%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L ++  G  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A F +A 
Sbjct: 2   RTDYCGQLNLTHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQQAAFSLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG+IE+ A+ + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMATGEIEVFAESLNIINRSE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR++DLRR  +   +  R +I + +R  M +++F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYIDLRRPEMANRLKTRAKITSFVRRFMDSQDFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++R ++ E    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREIMEKMIRELWLEIKGVDL--GHFPVMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + EF VF++  + + G   V  +P+ G   +R   D   ++    G  GLA+I   
Sbjct: 297 DLVKNVEFSVFAEPANDSKGRVAVIRVPS-GTELSRKQIDEYGKFVGIYGAKGLAWIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    + +  R   QDGD  FF AG            R  + +
Sbjct: 356 ERAAGLEGVQSPIAKFLNAEVIDGLLSRTGAQDGDILFFGAGSTKVVTDALGALRLKLGR 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +   + ++  W++DFP +E N EE  +   H+PFT P+         + +S  A  Y
Sbjct: 416 DLNLTKLDSWQPLWVIDFPMFEDN-EEGGLSAMHHPFTSPRNMSAEELVQEPVSAIANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H +E+    F+ +GI+++  + +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHRNEMQQAVFNILGINEQEQQEKFGFLLDALKFGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V
Sbjct: 535 LDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSYANTAALEELSISVV 584


>gi|317480093|ref|ZP_07939204.1| aspartyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|316903770|gb|EFV25613.1| aspartyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 585

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/594 (38%), Positives = 348/594 (58%), Gaps = 17/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           YR+H+CG+L +SDV   V L+GWV R R  GG+ F+D+RD YGITQ+V N +  +   E 
Sbjct: 2   YRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  R ++  N +I TG IE+   ++++L+ +   P  +    +  
Sbjct: 62  ANRLGREFVIQVKGTVNERFSK--NQHIPTGDIEIIVSELDVLNSSLTPPFTIEENTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  +  N+  R ++   +R  + ++ FIE  TPIL  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQDD++N  E + + +F+E   G  ++  F+R+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQDDVINLFEGMAKYLFKEI-RGVEMNEPFMRMPWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDIMKGHGFPVFD-----NAAY-IGGICAEGAAHYTRKQLDVLTEFVKRPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  GNV     V K       + ++   + + GD    ++G D +K      + R  
Sbjct: 352 ARVEADGNVK--SSVDKFYAQEVLQEMKAAFNAKLGDLILILSGDDAMKTRKQLNELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW++EE ++   H+PFT P+     L   D  +++A
Sbjct: 410 MGNQLGLRDKNKFVCLWVVDFPMFEWSDEEGRLMAMHHPFTHPKDEDIPLLDTDPTAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+VCNG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAQEQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL L IVE
Sbjct: 530 AYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSVIDQKQLDELNL-IVE 582


>gi|281492564|ref|YP_003354544.1| aspartyl-tRNa synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376228|gb|ADA65719.1| Aspartyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 590

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/601 (38%), Positives = 348/601 (57%), Gaps = 30/601 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT+  G++    +   + + GWV + R  GG+IF+D+RD  GI Q+V NP++A  ++A++
Sbjct: 3   RTNYAGNITEEYLNQTITVKGWVAKRRNLGGLIFIDLRDREGIVQIVVNPETAAADVAEA 62

Query: 65  V---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
               R+E+VL + G V+ R+++  N  I TG IE+ A  IEILS ++  P  +  + E  
Sbjct: 63  ADKARNEFVLEVTGKVVERASK--NDKIKTGGIEIEATAIEILSTSKTTPFEIKDDVEVL 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R KYR+LDLRR  + KNI  R     S+R  +    FI+  TP L  S+PEGARD+L
Sbjct: 121 DDTRLKYRYLDLRRPEMLKNITMRHATTRSIREYLDGAGFIDVETPFLNKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +G DRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGEFYALPQSPQLMKQLLMTAGLDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ +++I +  E ++  V ++   G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLSEEEIQDLTEELIAKVMKDV-KGIDVTLPFPRMKYDDAMNFYGSDKPDTRFELLLTD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           ++      +F+VF +   V       AI  K      +R   D++ E A+  G  GLA++
Sbjct: 299 LSALAKTIDFKVFQEAEVVK------AIVVKDAADKYSRKSIDKLTEQAKQNGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            +   E       G V+K L   +T++    L + D D   F+A D L   + A  A R 
Sbjct: 353 KFEKSEFA-----GGVSKFL-AESTDSFVNELKLTDNDLVLFVA-DSLDVANSALGALRL 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-------KG 471
            I ++ G+I+   F F W++D+P +EW++EE++   AH+PFT+P    ++        K 
Sbjct: 406 TIGKQQGLIDFRQFNFLWVIDWPMFEWSDEEERYMSAHHPFTLPTKETQAFLSADGHSKD 465

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +DL  ++A  YD+V NG+EI  G +R +  ++  +  S +G   E    +FG L  A   
Sbjct: 466 SDLKKVRAHAYDIVLNGYEIGGGSLRINTRQLQEEMLSALGFKLEDANEQFGFLLEALDY 525

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL +++
Sbjct: 526 GFPPHGGLALGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSIVAEKQLEELSIKL 585

Query: 592 V 592
            
Sbjct: 586 A 586


>gi|295106097|emb|CBL03640.1| aspartyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 592

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 225/592 (38%), Positives = 344/592 (58%), Gaps = 16/592 (2%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIA 62
           T +CG+L   DVG  V L+GW    R HGG+IF+D+RD  G TQVV +PD      F  A
Sbjct: 12  TATCGELRRGDVGREVVLTGWAWHNRDHGGLIFIDLRDRAGYTQVVVDPDCVSADDFAKA 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +  E+VL I G V  R AE +N N+ TG+IE+ A+ +E+L+ +   P  +    E  E
Sbjct: 72  EHLGREYVLKIAGTVRERGAEAVNPNMATGEIEVLAKSVEVLNTSVTPPFSIEDGIETDE 131

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + R K+R+LD+RR  +++ +  R  +  +MR  +    F+E  TPIL  S+PEGARD++V
Sbjct: 132 TTRMKWRYLDIRRPEMYQALHLRHTVAQAMRGALNERGFLEVETPILANSTPEGARDYIV 191

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR N G FYALPQ+PQQ+KQ+LM  G +RY+QIA CFRDED R+DR P EF Q+D+EM 
Sbjct: 192 PSRPNPGRFYALPQSPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQP-EFTQVDIEMG 250

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +D++N ME+V+       + G   +    R+ Y +++ R+G D+PD R  + + ++
Sbjct: 251 FVQGEDVMNLMEDVMAETLA--AVGVEHAFPLQRMQYRESMDRFGNDRPDTRFGMELVDI 308

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+    + F+VFS +     G  V AI AKG G  +R   +++ + A   G  G+A+I +
Sbjct: 309 TDIVKDTGFKVFSSV--AQSGGVVKAINAKGAGDWSRGDVEKLADIAAENGAKGMAWIAF 366

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
             D         P+ K  +     A++  +D++ GD   F A D  +  S    A R H+
Sbjct: 367 TSDGKEK----SPIIKFFSDEEFAALKEAMDVEPGDLLLF-AADTYEVASAVLSALRLHM 421

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A  L +      +  W+++FP + ++E+EKK    H+PFT           +D L+  ++
Sbjct: 422 ADALNVPR-EGHQLLWVVNFPMFRYDEDEKKYAAEHHPFTHVLDEDVDKIESDPLACGSY 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV +GFE+  G IR H ++         G++ E ++ +FG L  A + G PPHGGIA
Sbjct: 481 SYDLVMDGFEVGGGTIRIHNADEQRAVLRTCGLTDEEIDEKFGHLIHALELGAPPHGGIA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL G  ++R+V  FP + +  D + G+PS V+  QL+E+ LR +
Sbjct: 541 LGLDRLVMLLGGKASIRDVIAFPKTSSASDPMTGAPSAVTGRQLKEVNLRTL 592


>gi|92113967|ref|YP_573895.1| aspartyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|122990497|sp|Q1QWG2|SYD_CHRSD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91797057|gb|ABE59196.1| aspartyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 592

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/590 (40%), Positives = 351/590 (59%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  + V   V L GWVHR R HGG+IFLD+RD  GI QVV +PD+   F  A 
Sbjct: 2   RSHYCGQLNETLVDEEVALCGWVHRRRDHGGVIFLDLRDRDGIAQVVVDPDTPEAFANAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             R+E+VL I G +  R   T NA++ TG IE+ A+ +E+L+ A   P  +    +  E 
Sbjct: 62  RARNEFVLRIRGRIRLRPEGTQNAHMPTGMIEVLAKDVEVLNTAATPPFQLDEHGKVGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR K+R++DLRR  +   +  R+RI +S+R  +  + F++  TPILT ++PEGARD+LVP
Sbjct: 122 IRLKHRYIDLRRPEMIDKLRLRSRITHSVRAYLEGQGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHAGEFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDLEASF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ DI++  E+++R +F++  +    +  F ++ Y +A+ RYG+DKPDLR P+ + +V 
Sbjct: 241 VEESDIMSLTEDMIRRLFQDVLDVELPA--FPKMPYSEAMNRYGSDKPDLRIPLELVDVD 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS     + G  V A+   GG   +R   D   ++    G  GLA+I   
Sbjct: 299 DLMQGVDFKVFSGPAKADDG-RVAALKVTGGATLSRKEIDAYTDFVNIYGAKGLAWIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K +  +  E++  R+  +DGD  FF A D  +  + A  A R  + 
Sbjct: 358 ERAKGIQGLQSPIVKFMEDI-IESLLDRVGAEDGDIIFFGA-DKARIVNEALGALRVKLG 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +     +   W++DFP +E + +  ++   H+PFT P    E+ K  D  +  +  
Sbjct: 416 EDLDLY-TQAWAPLWVVDFPMFEAD-DNGRLAALHHPFTAPSCTPEAFKA-DPANALSRA 472

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H   +    F  +GI +E  + +FG L  A + G PPHGG+A 
Sbjct: 473 YDMVLNGTELGGGSIRIHDQTMQRAVFEVLGIGEEEADEKFGFLLDALKFGAPPHGGLAF 532

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VML+ GA+ +REV  FP +Q+   L+  +P  VS EQL+EL +R+
Sbjct: 533 GLDRLVMLMSGARTIREVIAFPKTQSAACLMTDAPGEVSAEQLKELNIRL 582


>gi|313884180|ref|ZP_07817946.1| aspartate--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620627|gb|EFR32050.1| aspartate--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 593

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 237/600 (39%), Positives = 350/600 (58%), Gaps = 20/600 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFE 60
           RT   G +    VG  + L GWV + R  GG+IF+D+RD  G  QVV +    PD    +
Sbjct: 4   RTVYNGLVSEEYVGQEITLKGWVQKRRDLGGVIFIDLRDREGFCQVVFDRQYIPDQ--MD 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ + G +  R+ E+IN  I TG  EL A ++ +L+ ++   + +  +R  
Sbjct: 62  EADHLRSEYVVEVTGKLRHRAEESINPKIPTGHFELVAHELTVLAKSKTPAIYIEDDRTS 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + KN+  R ++  ++R  +  ++FI+  TP LT S+PEGARDF
Sbjct: 122 DEEVRLKYRYLDLRRPNMVKNLKLRHQVTKTIRHYLDNKDFIDVETPYLTRSTPEGARDF 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R    SFYALPQ+PQ YKQLLM SG DRY+QI  CFRDED R DR P EF Q+D+E
Sbjct: 182 LVPTRREPNSFYALPQSPQIYKQLLMGSGIDRYYQIVRCFRDEDLRGDRQP-EFTQVDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ Q +I   +EN+L+ V +E + G  +   F  + YD+A+  YG+DKPD+R  + + 
Sbjct: 241 TSFMTQAEIQEIVENMLKDVVKE-TRGLEIKEAFPVMTYDEAMNSYGSDKPDIRFDMTLK 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           ++++    ++F+VF    +V  G +V AI  KG      R   D +    +  G  GLA+
Sbjct: 300 DLSDFAATADFKVFRA--AVENGGKVKAINLKGLADEYTRKTADELYNVVKPFGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
              ++ E G     GP+AK L +  + +AI   +D + GD  FF+A       +     R
Sbjct: 358 T--KITEDG---FNGPIAKFLGSDEDYQAITSAVDGEVGDILFFMADSADVVNNSLGALR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLS 476
            H+A + G+ +     F W++D+P  E++ E  +    H+PFT PQ   +  LK +   +
Sbjct: 413 THLAAKHGLYDEAELAFLWVVDWPLLEFDPEAGRYVAMHHPFTSPQNSDIAELKAHPEKA 472

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + A  YD+V NG+EI  G IR H  E+  Q F  +G + E  EN+FG L  AF  G PPH
Sbjct: 473 L-ANAYDIVLNGYEIGGGSIRIHTREMQDQMFELLGFTPEEAENQFGFLLHAFDYGFPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+VM+L   KN+R+V  FP S +  DL+  SP+ V+ +QLREL L + E+ K
Sbjct: 532 GGLAIGLDRLVMILAQEKNIRQVIAFPKSGSGMDLMSNSPAAVANDQLRELNLAVKESKK 591


>gi|171060683|ref|YP_001793032.1| aspartyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|238689079|sp|B1XWR8|SYD_LEPCP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|170778128|gb|ACB36267.1| aspartyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 598

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/597 (38%), Positives = 344/597 (57%), Gaps = 19/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+   G +    +G  V L GW HR R HGG+IF+D+RD  G+ Q+V +PD A  F+ A+
Sbjct: 2   RSSYAGQVSEKLMGQTVTLMGWAHRRRDHGGVIFIDLRDREGLVQIVCDPDRAEMFKTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L I GLV +R + T NAN+++G++E+   ++E+L+ +   P  +  E    E+
Sbjct: 62  GVRNEFCLKIVGLVRARPSGTENANLVSGKVEVLCHELEVLNPSVTPPFQIDDE-NLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + KN++ R R+   +R  + A  FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPQMQKNLMLRYRVSMEVRKFLDANGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVNDGHFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---FLRICYDDAIRRYGTDKPDLRNPIIMH 300
           + +++I    E ++R VF      NT+  +   +  + Y DA+ +YG+DKPDLR  +   
Sbjct: 240 LSEEEIRGMFEGMIRTVFR-----NTIGVDLPGYPVMTYADAMHKYGSDKPDLRVKLQFT 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +T+     +F+VFS       G  V      G   +R   D   E+ +  G  GLA+I 
Sbjct: 295 ELTDVMRDVDFKVFSAPAQSKNGRVVALRVPGGADMSRGEIDGYTEFVKIYGAKGLAWIK 354

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA---- 416
                 G      P+ K+L+      I  R  + +GD  FF A D  K  + A  A    
Sbjct: 355 VNDVAKGREGMQSPIVKNLHDAAIAEIIARTGVCNGDLIFFGA-DKAKVVNDAIGALRVK 413

Query: 417 --RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
              +   ++ G+   + +   W++DFP +E ++E  + +  H+PFT P+ G E     D 
Sbjct: 414 VGHSDFGKKNGLFE-DKWAPLWVVDFPMFEHDDEGDRWNAVHHPFTAPKDGHEDYMDTDP 472

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               A  YD+V NG+E+  G +R H +EV  + FS + I KE  + +FG L  A Q G P
Sbjct: 473 GKCIAKAYDMVLNGWELGGGSVRIHKAEVQSKVFSALKIGKEDAQVKFGFLLDALQYGAP 532

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PHGG+A G+DRIV ++  A+++R+V  FP +Q    LL G+PS V  +QLREL +R+
Sbjct: 533 PHGGLAFGLDRIVTMMTRAESIRDVIAFPKTQRAQCLLTGAPSLVDEKQLRELHIRL 589


>gi|167767120|ref|ZP_02439173.1| hypothetical protein CLOSS21_01638 [Clostridium sp. SS2/1]
 gi|167711095|gb|EDS21674.1| hypothetical protein CLOSS21_01638 [Clostridium sp. SS2/1]
 gi|291559551|emb|CBL38351.1| aspartyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 597

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/591 (39%), Positives = 342/591 (57%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEI 61
           R+H C ++    +G+ V + GWV + R  G +IF+D+RD  GI Q+V + +      +  
Sbjct: 10  RSHRCTEVSNKLIGTEVTVMGWVQKRRNLGSLIFVDLRDRSGILQLVFDQEVLSEEDYNK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+RSE+V+   G V  RSA  IN N+ TG IE+    + ILS +E  P P+   +   
Sbjct: 70  ANSLRSEYVVAAVGTVEKRSA-AINENLKTGDIEIKVHTLRILSESETPPFPIDENQTVK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  L +N+  R  +   +R  +  E F+E  TP+L  S+PEGARD+L
Sbjct: 129 DELRLKYRYLDLRRPNLQRNLRIRNDVTRMVRNFLGDEGFLEIETPVLGKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FY LPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGEFYGLPQSPQLFKQLLMCSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L+ +F+E  + + V    LR+ Y +A+ R+G+DKPD+R  + + N
Sbjct: 248 SFVDVDDVIDVNERLLKKIFKEVLDID-VQLPMLRMTYKEAMDRFGSDKPDMRFGMELTN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360
           V++     +F VF   L    G  V  + AKG G   R   D   ++A+  G  GLAYI 
Sbjct: 307 VSDTVAGCDFMVFKGALE--NGGSVRGLNAKGLGDLGRKKIDGFVDYAKDFGAKGLAYI- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +L   G V      AK +     +A+   +D Q GD   F A           + R HI
Sbjct: 364 -QLKSDGTVK--SSFAKFMKEEEMDALIKAMDGQAGDLLLFAADKDKVVFDVLGNLRLHI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++  +I+ + ++F W+ +FP  EW++E+ +    H+PFTMP              ++A 
Sbjct: 421 AKQYDMIDKSQYKFLWVTEFPLLEWSDEQNRYTAMHHPFTMPFEEDLEFIDERPGDVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  ++  + F  +G +KE   NRFG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTELGGGSIRIHQDDIQEKMFEALGFTKEDAHNRFGFLLDAFKFGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VM L G  ++R+V  FP  ++   L+  +P  V   QL ELG+ +
Sbjct: 541 YGLDRLVMWLTGEDSIRDVIAFPKVKDASCLMTQAPGPVDTLQLEELGIEL 591


>gi|319789638|ref|YP_004151271.1| aspartyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114140|gb|ADU96630.1| aspartyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 596

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/591 (39%), Positives = 342/591 (57%), Gaps = 15/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG++   D+G  V+++GWV   R HGG++F+D+RD  G  QVV +P+      E A
Sbjct: 10  RTHYCGEISEKDLGKDVKVAGWVDTTRDHGGVVFIDLRDRTGKVQVVFSPEISKELVEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +R E+V+ ++G V  R   T N  + TG  E+ A+K++IL+ +  LP P+    +  E
Sbjct: 70  KKLRHEYVVAVEGEVRRRPEGTENPKLKTGNYEIYAKKLQILNRSLPLPFPIEDNVKVSE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLRR  + +N++ R R+   +R     E F+E  TP LT S+PEGARDFLV
Sbjct: 130 EVRLKYRFLDLRRPKMAENLLFRHRLYRVVREVFNEEGFVEVETPYLTKSTPEGARDFLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQ+LM +G DRY+QIA CFRDED R+DR P EF Q+D EMS
Sbjct: 190 PSRIYPGKFYALPQSPQLFKQILMVAGIDRYYQIARCFRDEDLRADRQP-EFTQIDFEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV + D++   E  +R  ++E             + YD+A+ R+GTD+PD R  + +  +
Sbjct: 249 FVAERDVMAVAEKFIRRAYKELLGIEI--GEIPVMTYDEAMSRFGTDRPDTRFGLELKEI 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+      F+VF  +     G  V A+  KGG   +R   D + ++    G  GLA+I  
Sbjct: 307 TDIAKQCNFKVFRSV--AEKGGIVKALNFKGGAKLSRKEIDELTKFVGVYGAKGLAWIKV 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D         P+ K         I  RL+ + GD  FF+A  P    +  A+ R  + 
Sbjct: 365 LPD-----GLQSPIVKFFTEGEMNEILKRLEAEVGDILFFVADKPEVVNAALANLRLKLG 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAF 480
           +   +I+ +     W++DFP +EWNEEE++ +  H+PFT P +  +E L  N   +++A 
Sbjct: 420 KMANLIDESKVNILWVVDFPMFEWNEEEERWEALHHPFTSPKEEDIEKLLENP-GAVRAR 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H  +V  + F  +G+S+E  + RFG L  A + G PPHGG+A
Sbjct: 479 AYDMVLNGVEIGGGSIRIHREDVQEKVFKVIGLSEEEAKERFGFLLEALKYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+  ++ G +++R+V  FP +Q    LL G+P TV  EQL EL + +
Sbjct: 539 FGLDRLCAIMRGEESIRDVIAFPKTQRGQCLLTGAPDTVREEQLDELHIEV 589


>gi|187922663|ref|YP_001894305.1| aspartyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|238689468|sp|B2SX42|SYD_BURPP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|187713857|gb|ACD15081.1| aspartyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 599

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 238/600 (39%), Positives = 342/600 (57%), Gaps = 10/600 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F+ A+
Sbjct: 4   RSQYCGLVTEELLGQSVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L I G+V  R   T NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCLQIKGVVRGRPEGTTNAALKSGKIEVLCHELIVLNPSITPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  + +  FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDSLGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQIVKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R VF+E + G T+   F  + Y +A+RR+G+DKPDLR  +   ++T
Sbjct: 242 LSEQEIRDLFEDMIRHVFKE-TIGVTLDEKFPVMLYSEAMRRFGSDKPDLRVKLEFTDLT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAVRDVDFKVFSTPANTKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422
              G      P+ K+L+    +AI  R   QDGD  FF A D  K  + +  A R  I  
Sbjct: 361 VAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            E G  N      ++  W++DFP +E++EE+ +   AH+PFT P+         D     
Sbjct: 420 SEFGKANGLVETGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCL 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R H  EV  + F  + I+ E  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           IA G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+ +   K+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSEVDERQLRELHIRLRQPEPKV 599


>gi|224531685|ref|ZP_03672317.1| aspartyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511150|gb|EEF81556.1| aspartyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 586

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 222/591 (37%), Positives = 346/591 (58%), Gaps = 12/591 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++   C +L    +   V ++ WV ++R HG   FL+IRD Y   QV+   +    +IA+
Sbjct: 2   FKVIKCNELNEKLINKKVEINAWVKKIRHHGKFTFLNIRDRYEKAQVLITKEH-LLKIAE 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + I G+++ R +  IN N+ TG  E+ A+ IEI+S   ELP  +  +    E+
Sbjct: 61  KIKLEYCIKIQGILIKRPSNMINTNMKTGHFEILAKNIEIISKCNELPFMIEDDNNASEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + +YR+LDLRRD+L   I+ R    + +R  ++   F+E  TP    S+PEGARDF++P
Sbjct: 121 SKLEYRYLDLRRDSLKNKIILRCHATHLIRNFLVKRKFLELETPTFVKSTPEGARDFVIP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++++I   +EN+L  +F+   N N +   F +I Y  A+ +YG+DKPD R  + + +++
Sbjct: 240 VKKENIFKLIENMLFSIFKNCLNIN-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
            +  +SEF  F   L      ++  +  K    +RA  + + E A+     GL   F ++
Sbjct: 299 RNLKNSEFNEFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTRGL--YFTKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQ 422
           +   N    G +AK L     + I+    +++ D  FF A +  +  C      R  IA 
Sbjct: 357 E---NNKFSGGIAKFLKTEEQQLIKT-YSLENNDIIFFTANNKWETACKAMGQIRIKIAN 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQ 481
           +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+   + +L+ N   +I    
Sbjct: 413 DLGLIDENKFEFLWVYDFPLFEYDENTKTYTPAHHMFSLPKKRYITNLEKNPNKAIGEI- 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  ++  + F+ +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGIELGSGSIRIHNKKLQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ I 
Sbjct: 532 GIDRLIMLMTKSISIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIA 582


>gi|209363787|ref|YP_001423843.2| aspartyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|207081720|gb|ABS76474.2| aspartyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 610

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 238/599 (39%), Positives = 352/599 (58%), Gaps = 17/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH    +  S +   + L GWVHR R HGG+IF+D+RD  G+ QVV NP +S  F++A+
Sbjct: 22  RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 81

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+V+ + G V  R   T+N +I +G++E++A  I +L+ ++ LP  +   +E  E 
Sbjct: 82  SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 141

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R+LDLRR  + + +  R+ II  +R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 142 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 201

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +K++LM +GFDRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 202 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 260

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ DI   ME ++R +F  F N   + + F RI YD+AI+ YGTD+PDLRNP+ + +VT
Sbjct: 261 VEEKDIQQLMETMIRHLFSTFLN-VPLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 319

Query: 304 EHFVHSEFRVFSKILSVNPG--YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +     EF+VF +  + NP     V  +P KG   +R   D   ++    G  GLAYI  
Sbjct: 320 DLMKSVEFKVFKEPAN-NPHGRIAVLRLP-KGAELSRKAIDDYTQFVGIYGAKGLAYIKV 377

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              ++G      P+ K L       I  R   Q GD  FF   D  K  + +  A R+ +
Sbjct: 378 ENIDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFF-GADKAKIVNESLGALRDRL 436

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN--DLLSI 477
             +L +     ++  W++DFP ++  E+       H+PFT + +   E +  N  D+LS 
Sbjct: 437 CADLNLYEGQ-WKPVWVVDFPMFD-REDVGDWQALHHPFTALQETDPEKVIANPGDVLS- 493

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
               YD+V NG EI  G IR +   +       +GISKE+ E +FG L  A Q G PP G
Sbjct: 494 --RAYDIVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLG 551

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GIA G+DR+V ++ GA ++R+V  FP +Q     L  +P+ V   QL  LGL++ ++ K
Sbjct: 552 GIAFGLDRLVAIMTGASSIRDVIAFPKTQTAQCPLTNAPAQVETLQLETLGLKVSKHRK 610


>gi|212212083|ref|YP_002303019.1| aspartyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|215919207|ref|NP_820548.2| aspartyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|206584091|gb|AAO91062.2| aspartyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|212010493|gb|ACJ17874.1| aspartyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 610

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 238/599 (39%), Positives = 352/599 (58%), Gaps = 17/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH    +  S +   + L GWVHR R HGG+IF+D+RD  G+ QVV NP +S  F++A+
Sbjct: 22  RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 81

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+V+ + G V  R   T+N +I +G++E++A  I +L+ ++ LP  +   +E  E 
Sbjct: 82  SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 141

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R+LDLRR  + + +  R+ II  +R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 142 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 201

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +K++LM +GFDRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 202 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 260

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ DI   ME ++R +F  F N   + + F RI YD+AI+ YGTD+PDLRNP+ + +VT
Sbjct: 261 VEEKDIQQLMETMIRHLFSTFLN-VPLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 319

Query: 304 EHFVHSEFRVFSKILSVNPG--YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +     EF+VF +  + NP     V  +P KG   +R   D   ++    G  GLAYI  
Sbjct: 320 DLMKSVEFKVFKEPAN-NPHGRIAVLRLP-KGAELSRKAIDDYTQFVGIYGAKGLAYIKV 377

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              ++G      P+ K L       I  R   Q GD  FF   D  K  + +  A R+ +
Sbjct: 378 ENIDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFF-GADKAKIVNESLGALRDRL 436

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN--DLLSI 477
             +L +     ++  W++DFP ++  E+       H+PFT + +   E +  N  D+LS 
Sbjct: 437 CADLNLYEGQ-WKPVWVVDFPMFD-REDVGDWQALHHPFTALQETDPEKVIANPGDVLS- 493

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
               YD+V NG EI  G IR +   +       +GISKE+ E +FG L  A Q G PP G
Sbjct: 494 --RAYDMVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLG 551

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GIA G+DR+V ++ GA ++R+V  FP +Q     L  +P+ V   QL  LGL++ ++ K
Sbjct: 552 GIAFGLDRLVAIMTGASSIRDVIAFPKTQTAQCPLTNAPAQVETLQLETLGLKVSKHRK 610


>gi|53718287|ref|YP_107273.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|76811224|ref|YP_332265.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|62287537|sp|Q62MP0|SYD_BURMA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62287539|sp|Q63X93|SYD_BURPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|97196569|sp|Q3JVY8|SYD_BURP1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|52208701|emb|CAH34637.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|76580677|gb|ABA50152.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
          Length = 598

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/601 (39%), Positives = 338/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 2   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 62  GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQL-DDDNLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 181 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+  + G  +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 240 LGEQEIRDLFEDMIRHIFKT-TIGVELDATFPVMPYSEAMARFGSDKPDLRVKLEFTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 299 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   QDGD  FF A D  K  + +  A       
Sbjct: 359 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 417

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++EE +   AH+PFT P+         D    
Sbjct: 418 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRC 476

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 477 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHG 536

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+   E P
Sbjct: 537 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 596

Query: 596 K 596
           K
Sbjct: 597 K 597


>gi|46577231|sp|Q83BE5|SYD_COXBU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 590

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/598 (39%), Positives = 351/598 (58%), Gaps = 15/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH    +  S +   + L GWVHR R HGG+IF+D+RD  G+ QVV NP +S  F++A+
Sbjct: 2   RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+V+ + G V  R   T+N +I +G++E++A  I +L+ ++ LP  +   +E  E 
Sbjct: 62  SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R+LDLRR  + + +  R+ II  +R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 122 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +K++LM +GFDRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 182 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ DI   ME ++R +F  F N   + + F RI YD+AI+ YGTD+PDLRNP+ + +VT
Sbjct: 241 VEEKDIQQLMETMIRHLFSTFLN-VPLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIP-AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF +  + NP   +  +   KG   +R   D   ++    G  GLAYI   
Sbjct: 300 DLMKSVEFKVFKEPAN-NPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVE 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
             ++G      P+ K L       I  R   Q GD  FF   D  K  + +  A R+ + 
Sbjct: 359 NIDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFF-GADKAKIVNESLGALRDRLC 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN--DLLSIK 478
            +L +     ++  W++DFP ++  E+       H+PFT + +   E +  N  D+LS  
Sbjct: 418 ADLNLYEGQ-WKPVWVVDFPMFD-REDVGDWQALHHPFTALQETDPEKVIANPGDVLS-- 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG EI  G IR +   +       +GISKE+ E +FG L  A Q G PP GG
Sbjct: 474 -RAYDMVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR+V ++ GA ++R+V  FP +Q     L  +P+ V   QL  LGL++ ++ K
Sbjct: 533 IAFGLDRLVAIMTGASSIRDVIAFPKTQTAQCPLTNAPAQVETLQLETLGLKVSKHRK 590


>gi|260662177|ref|ZP_05863073.1| aspartyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260553560|gb|EEX26452.1| aspartyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 591

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/599 (39%), Positives = 353/599 (58%), Gaps = 18/599 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT+  G      +G  V + GWV + R  GG+IF+D+ D  GI Q+V N   D A FE+A
Sbjct: 3   RTNYAGRTSEEQIGQEVVVKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEEEDQAAFEVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              R++++L   GLV +R+   +N +I TG+IE+  ++ +IL+ ++  P  V  + +  E
Sbjct: 63  NQARNQYILEARGLVRARA--EVNPDIATGKIEIEVKEAKILAKSQTPPFEVQDDVDASE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR++DLRR  +   +  R+++ + +       +F++  TP LT S+PEGARD++V
Sbjct: 121 DLRLKYRYIDLRRPKMMNYLKLRSKVTSIVHNYFDNNDFLDVETPELTRSTPEGARDYIV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLMA+G D+Y+QIA CFRDED R DR P EF Q+D EMS
Sbjct: 181 PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQIAKCFRDEDLRGDRQP-EFTQIDTEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F E ++I    E +++ V +E + G  V   F R+ + +A+ +YG+DKPD R  +++ +V
Sbjct: 240 FAEPEEIQAMAEGLIKRVMKE-AVGVDVPTPFPRMEWQEAMDKYGSDKPDTRFDMLIQDV 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++    S F+VFS   +V  G  V AI   GG    +R    +  ++ +  G  GLA++ 
Sbjct: 299 SDLVKDSSFKVFSA--TVADGNFVRAIVVPGGADKYSRKDITKKEDYIKRYGAKGLAWV- 355

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ E G     GPVAK LN  +  A+  RL ++ GD   F+AG     C      R  I
Sbjct: 356 -KVTEEGY---NGPVAKFLND-DANALNERLSVKVGDLVLFVAGSFHVVCDSLGYLRESI 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESL-KGNDLLSIK 478
           A+EL +I+ N F + W++++P +E++E   K   AH+PFTM  +  ++ L +G D     
Sbjct: 411 AKELDLIDENKFNYLWVINWPMFEYDEGFGKWIAAHHPFTMLNEDDLKYLEEGEDPHQAH 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG EI  G IR H  EV  + F  +G +KE  + RFG L +A + GMPP GG
Sbjct: 471 AQSYDIVLNGNEIGGGSIRIHDPEVQEKVFKALGYTKEAAQARFGFLIKALENGMPPEGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DR VMLL  A ++R+V  FP +    + L  +P TV  EQL  L L + E PK+
Sbjct: 531 MAFGLDRWVMLLAHADSIRDVIAFPKNSKAVEPLTAAPGTVDDEQLEVLHLNVEEAPKE 589


>gi|53724995|ref|YP_102028.1| aspartyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121599730|ref|YP_994048.1| aspartyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124386059|ref|YP_001028288.1| aspartyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126450153|ref|YP_001081932.1| aspartyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126452649|ref|YP_001064973.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|167001912|ref|ZP_02267702.1| aspartate--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167718148|ref|ZP_02401384.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167737177|ref|ZP_02409951.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 14]
 gi|167814310|ref|ZP_02445990.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167822786|ref|ZP_02454257.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|167844361|ref|ZP_02469869.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167892873|ref|ZP_02480275.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167909589|ref|ZP_02496680.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|167917603|ref|ZP_02504694.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|226196745|ref|ZP_03792325.1| aspartate--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237810878|ref|YP_002895329.1| aspartate--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|238561941|ref|ZP_00441255.2| aspartate--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242314366|ref|ZP_04813382.1| aspartate--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254177015|ref|ZP_04883672.1| aspartyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254196309|ref|ZP_04902733.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254203714|ref|ZP_04910074.1| aspartyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254208689|ref|ZP_04915037.1| aspartyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254261739|ref|ZP_04952793.1| aspartate--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254360255|ref|ZP_04976525.1| aspartyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|166225326|sp|A3MNU6|SYD_BURM7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225327|sp|A2S8L9|SYD_BURM9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225328|sp|A1V745|SYD_BURMS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225329|sp|A3NRK2|SYD_BURP0 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|52428418|gb|AAU49011.1| aspartyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121228540|gb|ABM51058.1| aspartyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124294079|gb|ABN03348.1| aspartate--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126226291|gb|ABN89831.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126243023|gb|ABO06116.1| aspartate--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147745226|gb|EDK52306.1| aspartyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147750565|gb|EDK57634.1| aspartyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148029495|gb|EDK87400.1| aspartyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160698056|gb|EDP88026.1| aspartyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|169653052|gb|EDS85745.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|225931276|gb|EEH27283.1| aspartate--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237503764|gb|ACQ96082.1| aspartate--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|238523664|gb|EEP87101.1| aspartate--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242137605|gb|EES24007.1| aspartate--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243062321|gb|EES44507.1| aspartate--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254220428|gb|EET09812.1| aspartate--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 600

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/601 (39%), Positives = 338/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+  + G  +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKT-TIGVELDATFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   QDGD  FF A D  K  + +  A       
Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++EE +   AH+PFT P+         D    
Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+   E P
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598

Query: 596 K 596
           K
Sbjct: 599 K 599


>gi|33591895|ref|NP_879539.1| aspartyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|33594835|ref|NP_882478.1| aspartyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|33599107|ref|NP_886667.1| aspartyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|46577213|sp|Q7W001|SYD_BORPE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|46577214|sp|Q7W275|SYD_BORPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|46577217|sp|Q7WR42|SYD_BORBR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33564911|emb|CAE39856.1| aspartyl-tRNA synthetase [Bordetella parapertussis]
 gi|33571539|emb|CAE41019.1| aspartyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|33575153|emb|CAE30616.1| aspartyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|332381312|gb|AEE66159.1| aspartyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 596

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/595 (38%), Positives = 347/595 (58%), Gaps = 14/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT   G +    +G  V L GWV+R R HGG+IF+D+RD  G+ Q+V +PD+A  F  A+
Sbjct: 2   RTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRTGLAQIVFDPDNAEAFGTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I GLV  R   T NA + +G++E+  Q++EIL+ +   P  +  +    E+
Sbjct: 62  RLRNEFCISITGLVRLRPEGTANAELASGEVEVLCQQVEILNASVTPPFQL-DDDNLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N++ R R+   +R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPQMQHNLMLRYRVSIEVRKYLDQLGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 181 SRVNAGYFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I    E ++R VF+   + + +   F  + + +A++RYG+DKPDLR  +   ++T
Sbjct: 240 LNEVEIREIFEGMIRHVFKVVQDVD-LPTPFPIMSWTEAMQRYGSDKPDLRVNLEFTDMT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF+   +   G  V A+  +GGG  +R+  D   ++    G  GLAYI   
Sbjct: 299 DVMRDVDFKVFASA-ATTAGSRVVALRVQGGGEMSRSEIDAYTQFVGIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416
               G      P+ K+L+      +  R   Q+GD  FF A D  K  + A  A      
Sbjct: 358 DVAKGREGLQSPIVKNLHDAALAELVKRTGAQNGDIIFFGA-DRAKVVNDAIGALRVKIG 416

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +   ++ G+ +   ++  W++DFP +E++EEE +   AH+PFT P+ G E    +D   
Sbjct: 417 HSEFGKKAGLFSGG-WKPLWVVDFPMFEYDEEENRYTAAHHPFTSPKDGHEDFLESDPGK 475

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G +R H  EV  + F  + I  E    +FG L  A Q G PPH
Sbjct: 476 AVAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIDAEEAREKFGFLLDALQYGAPPH 535

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GGIA G+DRI+ ++ GA+++R+V  FP +Q    LL G+PS V  +QLREL +R+
Sbjct: 536 GGIAFGLDRIITMMAGAESIRDVIAFPKTQRAQCLLTGAPSEVDEKQLRELHIRL 590


>gi|323466685|gb|ADX70372.1| Aspartyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 617

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 227/595 (38%), Positives = 346/595 (58%), Gaps = 23/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +G  V L GWV RVR  G ++F+D+RD  GI Q++ N DS     +IA
Sbjct: 7   RTDYCGNITEKYIGENVNLYGWVQRVRNLGNLVFIDLRDRAGIVQIIVNKDSGKKLMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E+VL + G V+ RS   +N ++ TGQ+E+ A  I +L+ A+  P  +    E  E
Sbjct: 67  DSLGNEYVLQVKGKVVKRS--EVNPDMKTGQVEVDATDIIVLNKAKNPPFEIKNGVEISE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATYEFFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F ++  I +  E +L+ + ++  + + +     RI + D++ +YG DKPD R  +++H++
Sbjct: 244 FADEKTIQDYTEGLLKKIMKDVKSID-LKTPIKRISWTDSMNKYGCDKPDTRYGMLIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS   ++  G  V  I  K G    +R   D+  E+ +     GLA++ 
Sbjct: 303 SPIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKVYSRKKIDQKAEFIKRFHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E G  +  GPVA+ L   N EA++   D++ G+   FIA D  K C    D+ NH+
Sbjct: 361 F---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFIA-DKWKVC---CDSLNHL 411

Query: 421 ----AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
               A+E  II    ++F W++D+P +E++E   +   AH+PFTMP      L   +   
Sbjct: 412 RREFAKETDIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHK 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG E+  G IR H   +    F  +G +++    +FG L  A   G PPH
Sbjct: 472 AHARSYDIVMNGDEMGGGSIRIHKRSIQEDMFKALGFTEKRAYEQFGYLLDALDMGFPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR  M+L    N+R+V  FP + +  + +M +P+ V+ +QL +LG+ +
Sbjct: 532 AGLAIGLDRFAMMLADKDNIRDVLAFPKNASASEPMMHAPAPVADQQLNDLGIEV 586


>gi|34762827|ref|ZP_00143813.1| Aspartyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27887529|gb|EAA24613.1| Aspartyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 592

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/601 (38%), Positives = 350/601 (58%), Gaps = 30/601 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+ G+L V ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLGELRVKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NPNIPTGEIEVFAKEIEILNACDTLPFQISGVDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  + G   +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P      +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKVISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L   G  +   P+ K L+    +AI  + + + GD  F +A       S     R
Sbjct: 359 YI--KLTADGITS---PIVKFLSEEEMKAIIEKTEAKTGDVIFIVADKKKVVASALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT       S+K  DL   
Sbjct: 414 LKIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDLDKF 466

Query: 478 KAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
            A Q        YDLV NG EI  G IR    ++    F  +G+S++  + +FG    AF
Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQKEAKAKFGFFLDAF 526

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL +
Sbjct: 527 KYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDDKQLEELFI 586

Query: 590 R 590
           +
Sbjct: 587 K 587


>gi|311739535|ref|ZP_07713370.1| aspartate--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|311305351|gb|EFQ81419.1| aspartate--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 610

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 239/608 (39%), Positives = 340/608 (55%), Gaps = 31/608 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L     G  V L+GWV R R HGG+IF+D+RD  GI QVV   +S   E A  
Sbjct: 3   RTHLAGELRKELAGETVTLTGWVSRRRDHGGVIFIDLRDRSGIAQVVFR-ESDVAERAHD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121
           +RSE+ + + G V  R   + N N+ +G+IE++   +E+L+ +  LP  +       E  
Sbjct: 62  LRSEYCVKVTGTVEPRPEGSENPNLPSGEIEVNVADLEVLNKSAALPFQIDDPSTSGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR+   + +  R+    + R  + + +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRERQAQALRLRSAANRAARKVLDSHDFAEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G++YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLKPGTWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E ++  +++    G  +     R+ Y DA++ YG+DKPDLR  I +  
Sbjct: 241 SFVDQDDVIALAEEIVTELWKLI--GYEIKTPIPRMTYADAMKYYGSDKPDLRFDIKIVE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360
            TE F  + FRVF           V A+  +GG    R   D   +WA+ +G  GLAYI 
Sbjct: 299 CTEFFKDTTFRVFQNEY-------VGAVVMEGGASQPRRQFDAWQDWAKQRGAKGLAYI- 350

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +   GPVAK++     E I   +  + GD+ FF AGD     +    AR  I
Sbjct: 351 -TVGEDGTLG--GPVAKNITDAEREGIAEHVGAKPGDAIFFAAGDTKSSRALLGAARGEI 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGG-MESL 469
           A++L +I    + F W++D P +E + +            K    H+ FT P+   +++ 
Sbjct: 408 AKKLDLIKEGDWAFTWVVDAPLFEPSADATASGDVALGHSKWTAVHHAFTSPKPEYLDNF 467

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
             N   ++ A+ YD+VCNG EI  G IR H  +V  + F  +GI  E  + +FG L  AF
Sbjct: 468 DQNPGEAL-AYAYDIVCNGNEIGGGSIRIHQQDVQKRVFDVMGIGDEEAQEKFGFLLDAF 526

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           Q G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ +   Q +E G+
Sbjct: 527 QYGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAAIPAAQRKETGV 586

Query: 590 RIVENPKK 597
                 KK
Sbjct: 587 DYKPEKKK 594


>gi|24214380|ref|NP_711861.1| aspartyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|46577269|sp|Q8F5K1|SYD_LEPIN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|24195315|gb|AAN48879.1| aspartyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 601

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/601 (39%), Positives = 337/601 (56%), Gaps = 20/601 (3%)

Query: 4   YRTHS-CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           Y+  S  G+L  S  G  + L GW  R R  GG+IF+D+RD  GI QVVA  +     F 
Sbjct: 9   YKNRSWAGELNESQEGKQIVLFGWSFRFRDQGGVIFIDLRDRTGIIQVVARKELLGDSFT 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ VRSE+VL + G +  R  E+IN  + TG IE+   ++EIL+VA+  P  +    E 
Sbjct: 69  LAEKVRSEYVLAVRGTLKKRDLESINPRMQTGTIEVVLDQLEILNVAKTPPFSLDEFDEV 128

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E ++ KYR+LD RR+ L   ++KR   I ++R  +    F+E  TPIL  S+PEGARDF
Sbjct: 129 SEELKLKYRYLDFRREELKNRMIKRHEFIFAIRNYLNKRKFVEIETPILNKSTPEGARDF 188

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N   FYALPQ+PQ +KQ+LM  G +RYFQI  CFRDED R+DR P EF QLDME
Sbjct: 189 LVPSRLNPNQFYALPQSPQIFKQILMVGGMERYFQIVKCFRDEDLRADRQP-EFTQLDME 247

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SFV Q++IL+ +E ++  +++E  N   +S  F R+ Y+ A+  YG+DKPDLR  + + 
Sbjct: 248 FSFVSQEEILSEIEGLVETIYKEVFNIQ-LSIPFPRMTYNTAMEEYGSDKPDLRFGMKLV 306

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA-RSQGQPGLAYI 359
           +V+E     +F VF+  +      +V  +P  G   +R   +    W  R     GLAY+
Sbjct: 307 DVSEIVKDCDFNVFAGAVKNGGTVKVVCVPG-GSIISRKEIEDYTAWLNRDYKAKGLAYM 365

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                + G       + K       EAI      ++GD  FF A +           R  
Sbjct: 366 -----KHGTEGLESTITKRFKKEELEAISKACGSKEGDMLFFGADEREIVNHSLGALRLK 420

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-------GMESLKGN 472
           +++       N     WI+DFP +EWN++ K+ D  H+PFT P          ME+L+ N
Sbjct: 421 LSERFETPKENEINITWIVDFPMFEWNKDHKRWDALHHPFTSPSDESIPFFESMETLQKN 480

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
              +  A  YDLV NG EI  G IR H  E+  + F  +GI++E  + +FG L  A + G
Sbjct: 481 -AGNATAKAYDLVMNGVEIGGGSIRIHSREIQNKVFQILGINEEEAKEKFGFLLEALEFG 539

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG+A GIDR++MLL G K++R+V  FP +Q    L+   PS V  +QL+EL +++ 
Sbjct: 540 APPHGGLAFGIDRMLMLLTGGKSIRDVIAFPKTQKGLCLMSECPSPVEEKQLQELKIKLA 599

Query: 593 E 593
           +
Sbjct: 600 K 600


>gi|317498116|ref|ZP_07956418.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894593|gb|EFV16773.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 597

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/591 (39%), Positives = 343/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEI 61
           R+H C ++    +G+ V + GWV + R  G +IF+D+RD  GI Q+V + +      +  
Sbjct: 10  RSHRCTEVSNKLIGTEVTVMGWVQKRRNLGSLIFVDLRDRSGILQLVFDQEVLSEEDYNK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+RSE+V+   G V  RSA  IN N+ TG IE+    + ILS +E  P P+  ++   
Sbjct: 70  ANSLRSEYVVAAVGTVEKRSA-AINENLKTGDIEIKVHTLRILSESETPPFPIDEKQTVK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  L +N+  R  +   +R  +  E F+E  TP+L  S+PEGARD+L
Sbjct: 129 DELRLKYRYLDLRRPNLQRNLRIRNDVTRMVRNFLGDEGFLEIETPVLGKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FY LPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGEFYGLPQSPQLFKQLLMCSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L+ +F+E  + + V    LR+ Y +A+ R+G+DKPD+R  + + N
Sbjct: 248 SFVDVDDVIDVNERLLKKIFKEVLDID-VQLPMLRMTYKEAMDRFGSDKPDMRFGMELTN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360
           V++     +F VF   L    G  V  + AKG G   R   D   ++A+  G  GLAYI 
Sbjct: 307 VSDTVAGCDFMVFKGALE--NGGSVRGLNAKGLGDLGRKKIDGFVDYAKDFGAKGLAYI- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +L   G V      AK +     +A+   +D Q GD   F A           + R HI
Sbjct: 364 -QLKSDGTVK--SSFAKFMKEEEMDALIKAMDGQAGDLLLFAADKDKVVFDVLGNLRLHI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++  +I+ + ++F W+ +FP  EW++E+ +    H+PFTMP              ++A 
Sbjct: 421 AKQYDMIDKSQYKFLWVTEFPLLEWSDEQNRYTAMHHPFTMPFEEDLEFIDERPGDVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  ++  + F  +G +KE   NRFG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTELGGGSIRIHQDDIQEKMFEALGFTKEDAYNRFGFLLDAFKFGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VM L G  ++R+V  FP  ++   L+  +P  V   QL ELG+ +
Sbjct: 541 YGLDRLVMWLTGEDSIRDVIAFPKVKDASCLMTQAPGPVDTLQLEELGIEL 591


>gi|189082093|sp|A9KF44|SYD_COXBN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 590

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/598 (39%), Positives = 351/598 (58%), Gaps = 15/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH    +  S +   + L GWVHR R HGG+IF+D+RD  G+ QVV NP +S  F++A+
Sbjct: 2   RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+V+ + G V  R   T+N +I +G++E++A  I +L+ ++ LP  +   +E  E 
Sbjct: 62  SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R+LDLRR  + + +  R+ II  +R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 122 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +K++LM +GFDRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 182 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ DI   ME ++R +F  F N   + + F RI YD+AI+ YGTD+PDLRNP+ + +VT
Sbjct: 241 VEEKDIQQLMETMIRHLFSTFLN-VPLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIP-AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF +  + NP   +  +   KG   +R   D   ++    G  GLAYI   
Sbjct: 300 DLMKSVEFKVFKEPAN-NPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVE 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
             ++G      P+ K L       I  R   Q GD  FF   D  K  + +  A R+ + 
Sbjct: 359 NIDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFF-GADKAKIVNESLGALRDRLC 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN--DLLSIK 478
            +L +     ++  W++DFP ++  E+       H+PFT + +   E +  N  D+LS  
Sbjct: 418 ADLNLYEGQ-WKPVWVVDFPMFD-REDVGDWQALHHPFTALQETDPEKVIANPGDVLS-- 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG EI  G IR +   +       +GISKE+ E +FG L  A Q G PP GG
Sbjct: 474 -RAYDIVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR+V ++ GA ++R+V  FP +Q     L  +P+ V   QL  LGL++ ++ K
Sbjct: 533 IAFGLDRLVAIMTGASSIRDVIAFPKTQTAQCPLTNAPAQVETLQLETLGLKVSKHRK 590


>gi|313825350|gb|EFS63064.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
          Length = 606

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/603 (38%), Positives = 337/603 (55%), Gaps = 25/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++    G  +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF       P      +P       R F D   EWAR++G  GLAYI   + 
Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G     GPVAK+++      I  ++  + GD+ FF AG           AR  I +  
Sbjct: 352 DEG--VPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P +E  +E E   D A         H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFEPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G  +   
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587

Query: 595 PKK 597
           PKK
Sbjct: 588 PKK 590


>gi|296327393|ref|ZP_06869942.1| aspartate--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296155508|gb|EFG96276.1| aspartate--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 592

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/601 (38%), Positives = 351/601 (58%), Gaps = 30/601 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+ G+L + ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLGELRLKNIGEVVTLSGWVDTKRNVSTNLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIKVIGEVKERSNK--NPNIPTGEIEIFAKEIEILNTCDTLPFQISGVDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR+ +  N+  R R+I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRNKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  + G   +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P      +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKVISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L   G  +   P+AK L+    +AI  + + + GD  F +A       S     R
Sbjct: 359 YI--KLTADGIAS---PIAKFLSEEEMKAIIEKTEAKTGDVIFIVADKKKVVHSALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT       S+K  DL   
Sbjct: 414 LRIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDLDKF 466

Query: 478 KAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
            A Q        YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF
Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFLDAF 526

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGG+A GIDR +M++L  +++R+V  FP +     L+  +P+ V  +QL EL +
Sbjct: 527 KYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNIVDEKQLEELFI 586

Query: 590 R 590
           +
Sbjct: 587 K 587


>gi|292488543|ref|YP_003531427.1| aspartyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899718|ref|YP_003539087.1| aspartyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291199566|emb|CBJ46683.1| aspartyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553974|emb|CBA21019.1| Aspartyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 595

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 237/595 (39%), Positives = 342/595 (57%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG + +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F +A 
Sbjct: 2   RTEYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQEAFTLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N+ + TG+IE+ A ++ I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIRIVGTVRARDEKNKNSEMATGEIEVFATELTIINRSE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPDMANRLKARAKITSFVRRFMDDEGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +  + +  S  F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMERLVRNLWLDVKSVDLGS--FPIMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V A+   GG   +R   D    +    G  GLAYI   
Sbjct: 297 DLLKDIEFKVFSGPANDAKG-RVAALRVPGGAALSRKQIDDYTRFIEIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK LN    EAI  R    DGD  FF A D  K  + A  A R  + 
Sbjct: 356 QRAGGLEGITSPVAKFLNAGIVEAILQRTAAADGDLIFFGA-DRAKVVADALGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L I N + +   W++DFP +E ++ E+ +   H+PFT P+        N   S  A  
Sbjct: 415 RDLKITNGSAWAPLWVVDFPMFE-DDGEQGLTAMHHPFTAPKDMSPEQLKNAPESAIANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  ++    F  +GIS+     +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHNGQMQQTVFGILGISEHEQREKFGFLLDALKFGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VMLL G  N+R+V  FP +     L+  +P+  +   L ELG+ +VE  K
Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPNFANPASLTELGIEVVEKSK 588


>gi|119025594|ref|YP_909439.1| aspartyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|154487055|ref|ZP_02028462.1| hypothetical protein BIFADO_00893 [Bifidobacterium adolescentis
           L2-32]
 gi|118765178|dbj|BAF39357.1| aspartyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|154084918|gb|EDN83963.1| hypothetical protein BIFADO_00893 [Bifidobacterium adolescentis
           L2-32]
          Length = 599

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/605 (38%), Positives = 347/605 (57%), Gaps = 39/605 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++    VG  V L+GWV R R HGG+ F+D+RD+ G+ QVV   +    E+A+
Sbjct: 6   YRTHHATEVTEQLVGQKVTLAGWVDRRRDHGGVAFIDLRDNTGLVQVVIYDE----EMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117
            +RSE+V+ + G V  R     N ++ TG+IE+ A+ IE+L+ ++ LP  V        E
Sbjct: 62  PLRSEFVIQVVGEVRLRPDGNENEHLATGKIEVVAESIEVLAKSDALPFQVSTALENESE 121

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR ++ +N+  R ++  + R  +    F E  TP +  S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQRNLKLRAQMSKAARHALEEMGFEEIETPTMIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294
           LDMEM+FV+Q+D++   E V+  +++  S G  +     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYDIKLPIQRITWQDAMDKYGSDKPDLRFG 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353
           NP+I   +T++F ++ FRVF           V A+  KGG    R   D   +WA+ +G 
Sbjct: 299 NPLI--ELTDYFKNTPFRVFQAPY-------VGAVLFKGGAATPRRQFDAWQDWAKQRGA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAY+ +   E+G +   GPVAK+L+      ++  +  +DGD+ FF AG         
Sbjct: 350 KGLAYVVFA--ENGELK--GPVAKNLSEEERNGLKEAVGAEDGDAVFFAAGRRTSSQELL 405

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464
              R  +A+  G++  + F F W++DFP ++  ++    D A         H+PFTMP  
Sbjct: 406 GAVRVELARRAGLLKPDDFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D     +  YD+VCNG E+  G +R H  ++  +    +GI+ E   ++FG 
Sbjct: 466 DWIDKFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGITPEEAADKFGF 525

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPH GIA G DR   +L GA ++R+V  FP +    D L G+P+ +S EQ 
Sbjct: 526 LLEAFKYGAPPHAGIALGWDRTAAILAGADSIRDVIAFPKAGGGRDPLTGAPAPISAEQR 585

Query: 585 RELGL 589
            E G+
Sbjct: 586 AETGV 590


>gi|303232743|ref|ZP_07319428.1| aspartate--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481229|gb|EFL44304.1| aspartate--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 588

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/591 (38%), Positives = 334/591 (56%), Gaps = 16/591 (2%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIA 62
           TH+CG+L  SDV + V L+GWV   R  GG+IF+DIRD  G TQ+  +P       +  A
Sbjct: 7   THTCGELTSSDVNAHVVLTGWVWHRRDLGGLIFIDIRDKDGYTQIAIDPVCCSEETYACA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +RSEW + I G V  R A+    +  TG IE+ A  I + + +   P  +  + +  E
Sbjct: 67  QKLRSEWCVQIAGTVRLRPADQQKTSSTTGCIEVLASDITVFNASPTPPFQIEDKIDLSE 126

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +   YR+LD+RR    + + KR+    ++R       F+E  TP L  S+PEGARDFLV
Sbjct: 127 DMYLTYRYLDIRRPRTVQTLQKRSDFTFAIRQAFHNHAFMEVETPALFKSTPEGARDFLV 186

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+ +G+FYALPQ+PQ  KQLLM  G +RY+Q+A CFRDED R+DR P EF Q+DMEMS
Sbjct: 187 PSRIKKGAFYALPQSPQLLKQLLMIGGVERYYQVAKCFRDEDFRADRQP-EFTQVDMEMS 245

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV +DDIL+T+E +L   F +   G  +     R+ Y DA+  YG+DKPD R  + +HN+
Sbjct: 246 FVTEDDILHTLEQILHEAFAQV--GVDMPIPLPRMQYWDAMDTYGSDKPDTRFGMEIHNL 303

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T  F  SEF +F+     N    +  I AKG G   R+  D++ + A+ +G  GLA+I  
Sbjct: 304 TSGFTSSEFSLFANAEKENK--RICCICAKGAGNWGRSRIDKLQDVAKKEGAKGLAWI-- 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E+G++   G +AK ++      +   ++   GD   F     L         R H+A
Sbjct: 360 AFTEAGDIK--GSIAKFMSQDEIAYLTREMNATAGDLLLFCVDTRLVADEVMGALRLHMA 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAF 480
             LGI       F W+++FP + W++E       H PFT+P+   +E +K N  L I ++
Sbjct: 418 DALGITRSG-HAFLWVVNFPLFHWDDERGAYAAEHQPFTLPRCESVEEIKANP-LGIGSY 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD V +G+E   GG+R H  ++ L     +G + E    +FG L  A Q G PP GG A
Sbjct: 476 TYDFVMDGYEAGGGGMRIHDPKMQLDILELLGFTPERARAQFGFLLDALQYGAPPMGGFA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+ ML+ G +++REV  FP S +  DL+  +P++VS  QLR+L LR+
Sbjct: 536 LGLDRVCMLICGTESIREVIAFPKSTSGSDLMSAAPASVSEAQLRDLHLRV 586


>gi|284007618|emb|CBA73238.1| aspartyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 587

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 231/596 (38%), Positives = 347/596 (58%), Gaps = 14/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RT+ CG LGV+ VG  V L GWV+R R  G +IF+D+RD  G+ QVV      +  F  A
Sbjct: 2   RTNYCGQLGVAHVGQKVTLCGWVNRQRNLGKLIFVDMRDREGLVQVVFLQEKHAELFTQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+E+ + I G+V  R  E IN  I TG+IE+ A+ + I++ +E  PLP+   ++  E
Sbjct: 62  SQLRNEFCIQITGMVRKR--EQINKEIPTGEIEIVAEALTIINRSE--PLPIDSNQQNSE 117

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  +   + +R +I + +R  M AE F++  TPILT ++PEGARD+LV
Sbjct: 118 EIRLKYRYLDLRRPEMATRLRERAKITSFVRRFMDAEGFVDIETPILTKATPEGARDYLV 177

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E S
Sbjct: 178 PSRVHKGEFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETS 236

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  + +   ME ++R ++++  N       F  + + +A++RYG+DKPDLRNP+ + ++
Sbjct: 237 FMTAEQVREVMERLIRNLWQK--NKGIELGTFPVMTFAEAMQRYGSDKPDLRNPLELIDI 294

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF++  + +P   V A+   GG    R   D   E+    G  GLA++  
Sbjct: 295 ADLVNLVEFKVFAEAAN-DPKGRVAALCVPGGATLTRKQLDGYAEFVAIYGAKGLAWMKV 353

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                       P+AK L     + +  R   + GD   F AG            R  + 
Sbjct: 354 NSLAENQADIQSPIAKFLPQHVIDNLLARTQAKAGDILLFGAGKQNVVNDAMGALRLKVG 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++L I   N ++  WI+DFP +E  +E  +++  H+PFT P+    E L+ N L ++ A 
Sbjct: 414 RDLAITQNNSWKPLWIIDFPMFE-EDEHGELNAMHHPFTAPKDFTPEQLQANPLAAV-AN 471

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +++    F  + IS+   +++FG L  A Q G PPH G+A
Sbjct: 472 AYDMVINGYEVGGGSVRIHHNKMQQAVFEILNISQTDQQDKFGFLLEALQYGTPPHAGLA 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +VE  K
Sbjct: 532 FGLDRLVMLLTGTENIRDVIAFPKTTAAACLMTDAPSKANPAALAELAITVVEKIK 587


>gi|220912776|ref|YP_002488085.1| aspartyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|254781712|sp|B8H9C7|SYD_ARTCA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219859654|gb|ACL39996.1| aspartyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 599

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 228/596 (38%), Positives = 328/596 (55%), Gaps = 29/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    +G  V L+GWV R R HGG+ F+D+RD  G+ Q+V   +    E+   
Sbjct: 3   RTHDLGSLRSEHIGQTVTLAGWVGRRRDHGGVAFVDLRDASGVAQIVVREE----EVFHG 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL + G V  R     N  + TG+IE+ A+ + +L+ ++ LP  +    E  E  
Sbjct: 59  LRNEYVLQVTGTVSKRPEGNENPALGTGEIEVIAEDVTVLNTSDPLPFQIDEHVEVGEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R K+R+LDLRR    +NI  R+      R  +  E ++E  TP LT S+PEGARDFLVP+
Sbjct: 119 RLKHRYLDLRRPGPSRNIRLRSEANRVARDLLHHEGYVEIETPTLTRSTPEGARDFLVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLL   GF++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   EN+++ V++       +     RI Y DA+ RYG+DKPDLR    +  +TE
Sbjct: 238 DQDDVIRLGENIVKAVWKLID--VEIPTPIQRITYADAMARYGSDKPDLRFGQELTELTE 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  + F VF           V A+   GG    R   D   EWA+ +G  GLAY+ ++ 
Sbjct: 296 FFKDTNFGVFKAPY-------VGAVVMPGGASQARRALDAWQEWAKQRGAKGLAYVLYK- 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +A  GPVAK+L       +   +  + GD  FF AG+     +    AR  I   
Sbjct: 348 -EDGELA--GPVAKNLTDTERAGLADAVGAKPGDCIFFAAGEKTPSRALLGAARVEIGHR 404

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGND 473
            G+I+   + FCW++D P +E                +    H+ FT P+         D
Sbjct: 405 TGLIDPTDWAFCWVVDAPMFEPAAAAVASGDVAVGAGQWTAVHHAFTSPKPEFLDTFDKD 464

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  ++ YD+VCNG EI  G IR H  +V  + F  +G+ KE  + +FG L   F+ G 
Sbjct: 465 PESALSYAYDIVCNGNEIGGGSIRIHQRDVQERVFELMGLDKEDAQTKFGFLLEGFKYGA 524

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGGIA G DR+V LL G +++R+V  FP S    D L  +P+ ++ +Q +E G+
Sbjct: 525 PPHGGIAFGWDRVVSLLAGVESIRDVIAFPKSGGGFDPLTAAPAPITAQQRKEAGV 580


>gi|262066989|ref|ZP_06026601.1| aspartate--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291379295|gb|EFE86813.1| aspartate--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 592

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 241/604 (39%), Positives = 356/604 (58%), Gaps = 36/604 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+  +L V ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLAELRVKNIGETVILSGWVDTKRNVSTNLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NPNIPTGDIEVFAKEIEILNACDTLPFQISGIDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TPILT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMINNLKMRHRMIMSIRNYMDQAGFLDVDTPILTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  + G   +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFAVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQ-GQPG 355
           + ++++   +S F  FS   +V  G  V AI  P+     +R       E+ ++  G  G
Sbjct: 299 LKDLSDIVKNSSFNAFSS--TVQNGGLVKAIVAPSANEKFSRKIISEYEEYVKTYFGAKG 356

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI     + G      P+AK L+    +AI  + + + GD  F +A D  K  + A  
Sbjct: 357 LAYI-----KLGADGISSPIAKFLSEDEMKAIIEKTEAKTGDVIFIVA-DKKKVVAAALG 410

Query: 416 A-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           A R  I ++L +IN + F+F W++DFP ++++EEE++    H+PFT       S+K  DL
Sbjct: 411 ALRLRIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDL 463

Query: 475 LSIKAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
               A Q        YDLV NG EI  G IR    ++    F  +G+S+E  + +FG   
Sbjct: 464 DKFLAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFGFFI 523

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            AF+ G PPHGG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL E
Sbjct: 524 DAFKYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDDKQLEE 583

Query: 587 LGLR 590
           L ++
Sbjct: 584 LFIK 587


>gi|212219277|ref|YP_002306064.1| aspartyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|212013539|gb|ACJ20919.1| aspartyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 610

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 238/599 (39%), Positives = 352/599 (58%), Gaps = 17/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH    +  S +   + L GWVHR R HGG+IF+D+RD  G+ QVV NP +S  F++A+
Sbjct: 22  RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 81

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+V+ + G V  R   T+N +I +G++E++A  I +L+ ++ LP  +   +E  E 
Sbjct: 82  SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 141

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R+LDLRR  + + +  R+ II  +R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 142 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 201

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +K++LM +GFDRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 202 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 260

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ DI   ME ++R +F  F N   + + F RI YD+AI+ YGTD+PDLRNP+ + +VT
Sbjct: 261 VEEKDIQQLMETMIRHLFSTFLN-VPLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 319

Query: 304 EHFVHSEFRVFSKILSVNPG--YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +     EF+VF +  + NP     V  +P KG   +R   D   ++    G  GLAYI  
Sbjct: 320 DLMKSVEFKVFKEPAN-NPHGRIAVLRLP-KGAELSRKAIDDYTQFVGIYGAKGLAYIKV 377

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
              ++G      P+ K L       I  R   Q GD  FF   D  K  + +  A R+ +
Sbjct: 378 ENIDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFF-GADKAKIVNESLGALRDRL 436

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN--DLLSI 477
             +L +     ++  W++DFP ++  E+       H+PFT + +   E +  N  D+LS 
Sbjct: 437 CADLNLYEGQ-WKPVWVVDFPMFD-REDVGDWQALHHPFTALQETDPEKVIANPGDVLS- 493

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
               YD+V NG EI  G IR +   +       +GISKE+ E +FG L  A Q G PP G
Sbjct: 494 --RAYDMVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLG 551

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GIA G+DR+V ++ GA ++R+V  FP +Q     L  +P+ V   QL  LGL++ ++ K
Sbjct: 552 GIAFGLDRLVAIMTGASSIRDVISFPKTQTAQCPLTNAPTQVETLQLETLGLKVSKHRK 610


>gi|153208291|ref|ZP_01946670.1| aspartyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|120576075|gb|EAX32699.1| aspartyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
          Length = 590

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/598 (39%), Positives = 351/598 (58%), Gaps = 15/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH    +  S +   + L GWVHR R HGG+IF+D+RD  G+ QVV NP +S  F++A+
Sbjct: 2   RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+V+ + G V  R   T+N +I +G++E++A  I +L+ ++ LP  +   +E  E 
Sbjct: 62  SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R+LDLRR  + + +  R+ II  +R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 122 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +K++LM +GFDRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 182 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ DI   ME ++R +F  F N   + + F RI YD+AI+ YGTD+PDLRNP+ + +VT
Sbjct: 241 VEEKDIQQLMETMIRHLFSTFLN-VPLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIP-AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF +  + NP   +  +   KG   +R   D   ++    G  GLAYI   
Sbjct: 300 DLMKSVEFKVFKEPAN-NPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVE 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
             ++G      P+ K L       I  R   Q GD  FF   D  K  + +  A R+ + 
Sbjct: 359 NIDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFF-GADKAKIVNESLGALRDRLC 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN--DLLSIK 478
            +L +     ++  W++DFP ++  E+       H+PFT + +   E +  N  D+LS  
Sbjct: 418 ADLNLYEGQ-WKPVWVVDFPMFD-REDVGDWQALHHPFTALQETDPEKVIANPGDVLS-- 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG EI  G IR +   +       +GISKE+ E +FG L  A Q G PP GG
Sbjct: 474 -RAYDMVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR+V ++ GA ++R+V  FP +Q     L  +P+ V   QL  LGL++ ++ K
Sbjct: 533 IAFGLDRLVAIMTGASSIRDVISFPKTQTAQCPLTNAPTQVETLQLETLGLKVSKHRK 590


>gi|326336300|ref|ZP_08202471.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691474|gb|EGD33442.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 582

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/595 (38%), Positives = 341/595 (57%), Gaps = 21/595 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60
           YRTH+CG L  + +   V LSGWV R+R  G +I++D+RD YGITQ++ +    D A FE
Sbjct: 2   YRTHTCGALNSAHLSEQVTLSGWVQRIRNKGFMIWIDLRDRYGITQLIFDEERTDKAVFE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AK++  E V+ I G V+ R  E +NANI TG+IE+    + +L+ +E  P  +    + 
Sbjct: 62  QAKTLSREDVIQIQGTVIKR--EAVNANIPTGEIEILVTALTLLNHSEVPPFTIEDNTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR  + +N++ R ++   +R  + A+ FIE  TP+L  S+PEGARDF
Sbjct: 120 GEDLRMKYRYLDIRRTPVRENLIFRHKVGMMVRNYLSAQGFIEVETPVLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNAGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI+ T E + + + +E          F R+ Y +A++ YG DKPD+R  +   
Sbjct: 239 MSFVEQEDIIQTFEGLAKHLLKELK--GLEFGAFPRMTYAEAMKTYGNDKPDIRFGMKFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357
            + +   H +F+VF      N    V  I   G     R   D + EW +    G  GL 
Sbjct: 297 ELNDLAQHRDFKVF------NEAELVVGIAVPGANSYTRKEIDALVEWVKRPQIGASGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  + +E G       V K  +  + +A   R   + GD    ++G   K     +  R
Sbjct: 351 YV--KCNEDGTFK--SSVDKFYSEDDLKAWAERTGAKAGDLICILSGKANKVRGQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ LG+ N + +   W++DFP  EWNEEE +    H+PFT P+     L   D  ++
Sbjct: 407 MELAERLGLRNPDVYAPLWVVDFPLLEWNEEENRFFAMHHPFTSPKPEDIPLLDTDPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG E+  G IR    E+  + F+ +G + +  + +FG L  AF+ G PPHG
Sbjct: 467 RANAYDLVLNGNEVGGGSIRIFDRELQAKMFALLGFTPDQAQAQFGFLMNAFRYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+A G DR+V LL G + +R+   FP + +  D+++ +PS +   QL+EL +++ 
Sbjct: 527 GLAFGFDRLVALLGGQETIRDFIAFPKNNSGRDVMIDAPSPIDEVQLKELNIQLA 581


>gi|254181771|ref|ZP_04888368.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|184212309|gb|EDU09352.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1655]
          Length = 600

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 234/601 (38%), Positives = 338/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G++E+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRGRPEGTINAGLKSGRVEVLCHELNVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+  + G  +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKT-TIGVELDATFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSAPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   QDGD  FF A D  K  + +  A       
Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++EE +   AH+PFT P+         D    
Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+   E P
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598

Query: 596 K 596
           K
Sbjct: 599 K 599


>gi|253681699|ref|ZP_04862496.1| aspartate--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561411|gb|EES90863.1| aspartate--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 591

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 225/590 (38%), Positives = 342/590 (57%), Gaps = 13/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  S +G    + GWV R R  GG++F+D+RD  GI QVV   +     FE A
Sbjct: 10  RTVMCGELRESHIGQKHVVMGWVQRKRNLGGLVFVDLRDREGILQVVFGEEINKEAFEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             V+ E+ + ++G ++ R  ++ N  + TG +EL  Q I+ILS +E  P+ +  + +  E
Sbjct: 70  DLVKPEYCIAVEGELVKR--QSPNETLPTGMVELKGQNIKILSESETPPIYIKEDLDTDE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  +      R +    +R  +    F+E  TP+LT S+PEGARD+LV
Sbjct: 128 AVRLKYRYLDLRRPDMQSIFKIRHKTAKVIRDFLDENGFLEMETPMLTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FYALPQ+PQ +KQLLM SG+DRYFQI  CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYPGMFYALPQSPQLFKQLLMVSGYDRYFQITKCFRDEDLRANRQP-EFTQVDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +D+++  E +++ VF+E ++ + V     RI Y +A+ +YG+DKPDLR  + ++N+
Sbjct: 247 FVDMEDVISLNERLIKKVFKEIADVD-VKLPIQRITYKEAMDKYGSDKPDLRFGMEINNI 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+     +F+VF   +          +P   G G R   D++ E+ ++    GLA+I ++
Sbjct: 306 TDAVKDIDFKVFKDAIENGGSVRAIKVPNCAGMG-RKQIDKLGEFVKTYKAKGLAWIAYK 364

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            DE  +     P+AK L      A+  +LD + GD    +A             R  +A+
Sbjct: 365 EDEIKS-----PIAKFLQEEGMNAVIEKLDAKVGDLILIVADKDSVVLQALGALRLEMAK 419

Query: 423 ELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            L I+  N  F+F W+ +FP   +NEEE +    H+PFTMP         +D   ++A  
Sbjct: 420 RLEILKDNKEFKFAWVTEFPLLSYNEEENRYQAEHHPFTMPMDEDIEYLESDPGRVRAKA 479

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H +++  + F+ +G + E    RFG L  AF+ G PPHGG+A 
Sbjct: 480 YDIVLNGEELGGGSIRIHDTKLQEKMFNVLGFTSESAWERFGFLLEAFKFGPPPHGGLAY 539

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR++M L G +N+++V  FP +QN    L  +P+ V  +QL ELG+ +
Sbjct: 540 GFDRMIMFLAGTENIKDVIAFPKNQNAYCPLTEAPNVVDEKQLGELGINL 589


>gi|163753589|ref|ZP_02160712.1| aspartate--tRNA ligase [Kordia algicida OT-1]
 gi|161325803|gb|EDP97129.1| aspartate--tRNA ligase [Kordia algicida OT-1]
          Length = 584

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 223/599 (37%), Positives = 343/599 (57%), Gaps = 31/599 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           YR+HSCG+L  S +   V L+GWV + R  G +I++D+RD YGITQ++ + +   +  FE
Sbjct: 2   YRSHSCGELRASHITQEVTLAGWVQKSRDKGFMIWVDLRDRYGITQLIFDEERTPADIFE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AK++  E+V+ + G V+ R+++  N NI TG IE+  +++ +L+ +   P  +  E + 
Sbjct: 62  KAKTLGREFVIQVKGEVIERASK--NPNIPTGDIEILVKELTVLNASLLPPFTIEDETDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LD+RR+ +  +++ R ++   +R  + ++ FIE  TP L  S+PEGARDF
Sbjct: 120 GEDIRMKYRYLDIRRNPVKDSLIFRHKVTMEVRKYLSSQEFIEVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DILN  E + R + +E        + F R+ YD A++ YG DKPD+R  +   
Sbjct: 239 MAFVEQEDILNVFEGLTRHLLKEIKGIEI--DKFPRMTYDHAMKTYGNDKPDIRFGMEFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
            + E   H +F+VF      N    V  I   GG    R   D++ +W +      L  +
Sbjct: 297 ELNEVAQHKDFKVF------NSAELVVGIAVPGGASYTRKEIDKLIDWVKRPQVGALGMV 350

Query: 360 FWRLDESGNVAG-------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
           + + +E G+             +AK  ++   +A         GD    ++G   K  + 
Sbjct: 351 YVKCNEDGSFKSSVDKFYDQEDLAKWADVTGAKA---------GDLICVLSGHTNKVRAQ 401

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
            +  R  +A+ L + N   F   W+MDFP  E +EE       H+PFT P+ G   L   
Sbjct: 402 LSALRMELAERLNLRNPEEFAPLWVMDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDT 461

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +   +KA  YDLV NG EI  G IR H  E+    F ++G ++E  + +FG L  AFQ G
Sbjct: 462 NPGDVKANAYDLVLNGNEIGGGSIRIHDKEIQAIMFKHLGFTEEEAKAQFGFLMDAFQYG 521

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            PPHGG+A G+DR+V +L G + +R+   FP + +  D+++ +P+ +  EQL+EL +++
Sbjct: 522 APPHGGLAFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAPIDDEQLKELSIKL 580


>gi|329296282|ref|ZP_08253618.1| aspartyl-tRNA synthetase [Plautia stali symbiont]
          Length = 593

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 233/597 (39%), Positives = 342/597 (57%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  + D    F++A 
Sbjct: 2   RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIAQVFFDADHQQAFQLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N+++ TG IE+ A ++ I++ AE  P+P+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRAREEKNRNSDMATGDIEVFAHELNIINRAE--PMPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  YR+LDLRR  + + +  R RI + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLTYRYLDLRRPEMAQRLKNRARITSFVRRFMDGEGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMISGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + + + ME ++R ++ +    +    +F ++ + +A+ RYG+DKPDLRNP+ + +V 
Sbjct: 239 MSAEQVRSVMERMIRELWLDIKGIDL--GDFPQMTFAEAMNRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF+   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DLLKSVEFQVFAGPAN-DPKGRVAALRVPGGAALTRKQIDEYGSFVGIYGAKGLAWMKIN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              SG      PV K L     EAI  R D QDGD  FF A D  K  + A  A R  + 
Sbjct: 356 ARASGFDGVQSPVVKFLTPDIVEAILQRTDAQDGDLIFFSA-DRAKVVADALGALRLKVG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L I N   +   W++DFP +E  ++E  +   H+PFT P+         D     A  
Sbjct: 415 RDLQITNDKAWAPLWVVDFPMFE-EDDEGGLAAMHHPFTSPKALTAEQLAADPTQAVANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H   +    FS +GIS+E    +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHSGNMQQTVFSILGISEEEQREKFGFLLDALKFGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           G+DR+ MLL    N+R+V  FP +     L+  +PS  +   L +LG++I   PKK+
Sbjct: 534 GLDRLTMLLTDTDNIRDVIAFPKTTAAACLMTEAPSEANPAALADLGIQIA--PKKV 588


>gi|256843055|ref|ZP_05548543.1| aspartyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256614475|gb|EEU19676.1| aspartyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
          Length = 617

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/603 (38%), Positives = 352/603 (58%), Gaps = 17/603 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +G  V L GWV RVR  G ++F+D+RD  G+ Q+V N DS     +IA
Sbjct: 7   RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKKLMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E+V+ + G V+ RS   +N ++ TGQ+E+ A +I IL+ A+  P  +    E  E
Sbjct: 67  DSLGNEYVVQVKGKVVKRS--EVNPDMKTGQVEVDATEIIILNKAKNPPFEIKDGIEVSE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +++ I +  E +L+ + ++   G  +     RI + D++ +YG DKPD R  +++H++
Sbjct: 244 FADEETIQSYTEGLLKKIMKDV-KGIDLKTPIKRITWTDSMNKYGCDKPDTRYGMLIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS   ++  G  V  I  K G    +R   D+  ++ +     GLA++ 
Sbjct: 303 SPIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKEYSRKKIDKKADFIKRFHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E G  +  GPVA+ L   N EA++   D++ G+   F+A D  K C  + D  R  
Sbjct: 361 F---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFVA-DKWKVCCDSLDHLRRE 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GII    ++F W++D+P +E++E   +   AH+PFTMP      L   +     A
Sbjct: 415 FAKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHKAHA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H   +    F  +G +K+    +FG L  A   G PPH G+
Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           A G+DR  M+L    N+R+VS FP + +  + +M +P+ V+ +QL +LG+ + E  +  +
Sbjct: 535 AIGLDRFAMMLADKDNIRDVSAFPKNASTSEPMMHAPAPVADQQLADLGIEVEEKYQDSV 594

Query: 600 KIS 602
           K +
Sbjct: 595 KAT 597


>gi|227879061|ref|ZP_03996951.1| aspartyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256850293|ref|ZP_05555722.1| aspartyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262046028|ref|ZP_06018992.1| aspartyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293381307|ref|ZP_06627310.1| aspartyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|227861356|gb|EEJ68985.1| aspartyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256712930|gb|EEU27922.1| aspartyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260573987|gb|EEX30543.1| aspartyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290922123|gb|EFD99122.1| aspartyl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 617

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/603 (38%), Positives = 352/603 (58%), Gaps = 17/603 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +G  V L GWV RVR  G ++F+D+RD  G+ Q+V N DS     +IA
Sbjct: 7   RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKKLMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E+V+ + G V+ RS   +N ++ TGQ+E+ A +I IL+ A+  P  +    E  E
Sbjct: 67  DSLGNEYVVQVKGKVVKRS--EVNPDMKTGQVEVDATEIIILNKAKNPPFEIKDGIEVSE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +++ I +  E +L+ + ++   G  +     RI + D++ +YG DKPD R  +++H++
Sbjct: 244 FADEETIQSYTEGLLKKIMKDV-KGIDLKTPIKRITWTDSMNKYGCDKPDTRYGMLIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS   ++  G  V  I  K G    +R   D+  ++ +     GLA++ 
Sbjct: 303 SPIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKEYSRKKIDKKADFIKRFHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E G  +  GPVA+ L   N EA++   D++ G+   F+A D  K C  + D  R  
Sbjct: 361 F---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFVA-DKWKVCCDSLDHLRRE 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GII    ++F W++D+P +E++E   +   AH+PFTMP      L   +     A
Sbjct: 415 FAKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHKAHA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H   +    F  +G +K+    +FG L  A   G PPH G+
Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           A G+DR  M+L    N+R+VS FP + +  + +M +P+ V+ +QL +LG+ + E  +  +
Sbjct: 535 AIGLDRFAMMLADKDNIRDVSAFPKNASASEPMMHAPAPVADQQLADLGIEVEEKYQDSV 594

Query: 600 KIS 602
           K +
Sbjct: 595 KAT 597


>gi|314987970|gb|EFT32061.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314989780|gb|EFT33871.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
          Length = 606

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/603 (38%), Positives = 338/603 (56%), Gaps = 25/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++    G  +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF       P      +P       R F D   EWAR++G  GLAYI   + 
Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G     GPVAK+++      I  ++  + GD+ FF AG           AR  I +  
Sbjct: 352 DEG--VPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P ++  +E E   D A         H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GIS E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGISPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G  +   
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587

Query: 595 PKK 597
           PKK
Sbjct: 588 PKK 590


>gi|256851203|ref|ZP_05556592.1| aspartyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260660627|ref|ZP_05861542.1| aspartyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282934670|ref|ZP_06339913.1| aspartate--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297206069|ref|ZP_06923464.1| aspartate--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|256616265|gb|EEU21453.1| aspartyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548349|gb|EEX24324.1| aspartyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281301245|gb|EFA93546.1| aspartate--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297149195|gb|EFH29493.1| aspartate--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 610

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 227/599 (37%), Positives = 347/599 (57%), Gaps = 17/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +   V L GWV RVR  G +IF+D+RD  GI QVV N DS     + A
Sbjct: 4   RTDYCGNITSQYLDQEVTLYGWVQRVRNLGNLIFIDLRDREGIVQVVVNHDSGKDLMDKA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E+V+ + G V+ RS  ++N  + TG++E+ A  I IL+ A+  P  +  +    E
Sbjct: 64  DSLGNEYVIEVKGKVVKRS--SVNPEMKTGEVEVDATTITILNEAKNPPFEIKDDLSANE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             + K R+LDLRR TL + ++ R++I  ++     +E FI+  TP L  S+PEGARD+LV
Sbjct: 122 QTKLKCRYLDLRRSTLQRALITRSKITTAVHEFFDSEGFIDIETPDLGKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA CFRDED R DR P EF Q+DME S
Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCFRDEDLRGDRQP-EFTQIDMETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  + +  E +L+ V  +   G  +     RI ++DA+  YG+DKPD+R  + + ++
Sbjct: 241 FLDEKGVQDITERLLQKVMHDV-KGVDIKLPLPRITWNDAMNYYGSDKPDMRFDMKIQDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            E F  S+F+VFS   ++  G  V AI  +GG    +R   +   E+ +     GLA   
Sbjct: 300 NEVFKDSDFKVFSG--AIADGGFVKAIAVEGGAKAYSRKKIEEKQEYIKRFHAKGLA--- 354

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           W   E G  +  GPV++ +     E ++   +++ G+   F+A D  K C  A    R  
Sbjct: 355 WAKFEDGEFS--GPVSRFITDNEAEQLKKIYNLKGGELLLFVA-DKWKVCCDALGYLRRS 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA EL +++ + + F W++D+P +E++E + +   AH+PFTMP      L   +     A
Sbjct: 412 IAIELNMVSKDDYHFEWVVDWPLFEYDEGDDQWIAAHHPFTMPDDEGIKLLETEPHKAHA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD++ NG+E+  G IR H  ++ L+    +G +KE    +FG L  A   G PPH G+
Sbjct: 472 RSYDIILNGYELGGGSIRIHKKDIQLKMLKALGFTKEKAYEQFGFLLDALDMGFPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           A G+DR  MLL G  N+R+V  FP + +  + +M +PS VS EQ+ ELG+ +  + + +
Sbjct: 532 AIGLDRFAMLLTGKDNIRDVIAFPKTASASEPMMKAPSPVSDEQMAELGIEVTASARSV 590


>gi|165919222|ref|ZP_02219308.1| aspartyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|165917083|gb|EDR35687.1| aspartyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 590

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/598 (39%), Positives = 351/598 (58%), Gaps = 15/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH    +  S +   + L GWVHR R HGG+IF+D+RD  G+ QVV NP +S  F++A+
Sbjct: 2   RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+V+ + G V  R   T+N +I +G++E++A  I +L+ ++ LP  +   +E  E 
Sbjct: 62  SLRNEYVIKVTGKVHKRPEGTVNPHIPSGELEIAASDITLLNKSKPLPFNIDEYQEVSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R+LDLRR  + + +  R+ II  +R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 122 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +K++LM +GFDRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 182 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ DI   ME ++R +F  F N   + + F RI YD+AI+ YGTD+PDLRNP+ + +VT
Sbjct: 241 VEEKDIQQLMETMIRHLFSTFLN-VPLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIP-AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF +  + NP   +  +   KG   +R   D   ++    G  GLAYI   
Sbjct: 300 DLMKSVEFKVFKEPAN-NPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVE 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
             ++G      P+ K L       I  R   Q GD  FF   D  K  + +  A R+ + 
Sbjct: 359 NIDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFF-GADKAKIVNESLGALRDRLC 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN--DLLSIK 478
            +L +     ++  W++DFP ++  E+       H+PFT + +   E +  N  D+LS  
Sbjct: 418 ADLNLYEGQ-WKPVWVVDFPMFD-REDVGDWQALHHPFTALQETDPEKVIANPGDVLS-- 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD+V NG EI  G IR +   +       +GISKE+ E +FG L  A Q G PP GG
Sbjct: 474 -RAYDMVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DR+V ++ GA ++R+V  FP +Q     L  +P+ V   QL  LGL++ ++ K
Sbjct: 533 IAFGLDRLVAIMTGASSIRDVIAFPKTQTAQCPLTSAPTQVETLQLETLGLKVSKHRK 590


>gi|203287890|ref|YP_002222905.1| aspartyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|238690591|sp|B5RRQ0|SYD_BORRA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|201085110|gb|ACH94684.1| aspartyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 583

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/588 (35%), Positives = 337/588 (57%), Gaps = 9/588 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++   C  +    +   + ++GWV ++R HG + F++IRD Y   Q++ + D    +I  
Sbjct: 2   FKIIKCNQINNKLINKKIEINGWVKKIRNHGKVTFINIRDRYDEAQILVS-DEKLLKITS 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++ E+ + I G +  R  E +N  + TG++E+ A+ I+I+S   ELP  +       ++
Sbjct: 61  QIKMEYCIKIQGKLNLRPLELVNREMKTGELEIIAENIDIISKCNELPFMIENNNNASDN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            + +YR+LDLRR+   + I+ R+++I+ +R  +  ++F+E  TP    S+PEGARDFLVP
Sbjct: 121 SKLEYRYLDLRREEQKQKIILRSKVIHIIRNHLTKQDFLELETPTFVKSTPEGARDFLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++G FYALPQ+PQ YKQL M +G D+YFQIA C+RDED R DR P EF QLD+EMSF
Sbjct: 181 SRIHKGHFYALPQSPQIYKQLAMIAGLDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++++I   +EN++  +F+   N  T+   F +I Y DA+  YG+DKPD R  +++ +++
Sbjct: 240 IKKENIFKLIENLIFTIFKNSLNI-TLPKKFKKITYKDAMNIYGSDKPDTRYELLIQDMS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +    S F VF   L      +   I  +    +R+  + + E A+      L   F ++
Sbjct: 299 KALKQSPFDVFKDTLQNKGTIKALIIKNQAHNFSRSKINSLEEHAKLYKARTLY--FTKI 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           +   N    G +AK +N +    I     +++ D  FFIA      C      R  IA E
Sbjct: 357 E---NNEFTGGIAKFINPIKKTLIET-YSLKNNDIIFFIADLWETACKAIGQIRIKIATE 412

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +IN N FEF WI DFP +E++E+ +    AH+ F+MPQ    +   ++   +    YD
Sbjct: 413 LNLINKNIFEFLWIYDFPLFEYDEDTQSYKAAHHMFSMPQAKYINTLESNPSKVLGEVYD 472

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+ SG IR H  E+  + F+ VG + ++ E RF    +A + G P HGGIA GI
Sbjct: 473 IVLNGTELGSGSIRVHTKELQQRIFNIVGFNDKIAEERFDFFLKALEYGAPIHGGIAIGI 532

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           DR++ML+  + ++++V LFP +      L  SPS +S EQL+EL L I
Sbjct: 533 DRLLMLMTNSNSIKDVILFPKNSFAASPLDKSPSKISDEQLKELNLTI 580


>gi|238783295|ref|ZP_04627320.1| Aspartyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238715888|gb|EEQ07875.1| Aspartyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 595

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/591 (38%), Positives = 341/591 (57%), Gaps = 11/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANALNIINRSE--PLPLDSNQINSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V A+   GG    R   D   ++    G  GLA++   
Sbjct: 297 DLVKEVEFKVFSGPANDTKG-RVAALRVPGGAQVTRKQIDEYGQFVGIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK L+    EAI  R   + GD  FF A D  K  + A  A R  + 
Sbjct: 356 DRAAGMEGVQSPIAKFLSAEVLEAILTRTQAESGDILFFGA-DSNKIVTDAMGALRLKVG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +     +   W++DFP +E ++ E  +   H+PFT P+            +  A  
Sbjct: 415 RDLQLTQLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKEMSPQQLAAAPTTAIANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H +E+  Q F  +GI++     +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V
Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584


>gi|224024024|ref|ZP_03642390.1| hypothetical protein BACCOPRO_00741 [Bacteroides coprophilus DSM
           18228]
 gi|224017246|gb|EEF75258.1| hypothetical protein BACCOPRO_00741 [Bacteroides coprophilus DSM
           18228]
          Length = 595

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/595 (38%), Positives = 351/595 (58%), Gaps = 16/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           +R H+CG+L ++D G  V L+GWV RVR  GG+ F+D+RD YGITQ+V N D  +   E 
Sbjct: 12  FRNHTCGELRIADAGKSVTLAGWVQRVRKMGGMTFVDLRDRYGITQLVFNTDVNAELCER 71

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  RS++  N N+ TG++E++ +++ +L+ A+  P  +    +  
Sbjct: 72  ASHLGREYVIQVKGTVNERSSK--NPNLPTGEVEITVEELTVLNSAQTPPFTIEDNTDGG 129

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  + KN+  R R+   +R  +    F+E  TP+L  S+PEGARDF+
Sbjct: 130 DDLRMKYRYLDLRRTAVRKNLELRHRMTMEVRRYLDGLGFLEVETPMLIGSTPEGARDFV 189

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 190 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 248

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI+ T E + + +F+E   G  ++  FLR+ + DA++ YG+DKPDLR  +    
Sbjct: 249 SFVEQEDIIETFEGMAKHLFKEL-RGVELTEPFLRMPWADAMKYYGSDKPDLRFGMKFVE 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G     R   D++ E+ +         ++
Sbjct: 308 LMDILKGYGFSVFD-----NAAY-IGGICAEGAAHYTRKQLDQLTEFVKRPQIGAKGLVY 361

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  GNV     V K  +    + ++     + GD    ++G D +K      + R  
Sbjct: 362 ARVEADGNVK--SSVDKFYSQEVLQQMKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  +++A
Sbjct: 420 MGNQLGLRDKNKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDPAAVRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 480 DAYDMVVNGVEVGGGSIRIHDSQLQAKMFEILGFTPEKAQEQFGFLMNAFKFGAPPHGGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR V L  G  ++R+   FP + +  D+++ +P  +  +QL EL L+IV+N
Sbjct: 540 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGFLDQKQLDELNLKIVDN 594


>gi|134279807|ref|ZP_01766519.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|134249007|gb|EBA49089.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 305]
          Length = 600

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/601 (39%), Positives = 337/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R  F+  + G  +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHTFKT-TIGVELDATFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   QDGD  FF A D  K  + +  A       
Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++EE +   AH+PFT P+         D    
Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+   E P
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598

Query: 596 K 596
           K
Sbjct: 599 K 599


>gi|269956474|ref|YP_003326263.1| aspartyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269305155|gb|ACZ30705.1| aspartyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 600

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 243/605 (40%), Positives = 335/605 (55%), Gaps = 43/605 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G L    +G  V L+GWV R R HGG+ F+D+RD  GI QVV   +S    +A  
Sbjct: 3   RTHTAGSLRAEHIGQTVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVIRDES----VAHP 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREY- 120
           +R+E+VL + G V +R     N N+ TG+IE+ A  +  L+ +  LP  V     + E  
Sbjct: 59  LRAEFVLQVVGEVAARPEGNANPNLATGEIEVIATSVTTLNESAPLPFQVSTALADTEVI 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R  +R+LDLRR      +  R +   + R  + AE+F+E  TP LT S+PEGARDF
Sbjct: 119 GEEARLAHRYLDLRRPVSQHAMRLRAKANQAARRVLDAEDFVEVETPTLTRSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 179 LVPARLAPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPII 298
           MSFVEQDD++   E +L  ++E    G T+     R+ + DA+R YG+DKPDLR  NP++
Sbjct: 238 MSFVEQDDVIALAERILVALWELI--GVTIPTPIPRMTFADAMRLYGSDKPDLRFGNPLV 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
              +TE+F  + FRVF         Y    + A G    R   D   EWA+ +G  GLAY
Sbjct: 296 --ELTEYFTDTPFRVFQA------EYVGAVVMAGGASQPRRQFDAWQEWAKQRGAKGLAY 347

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E G +   GPVAK+L+      +      Q GD+ FF AG   +  +    AR 
Sbjct: 348 V--TFAEDGTLG--GPVAKNLSDAERAGLAAATGAQPGDAVFFAAGKTDEARALLGAARI 403

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQ----G 464
            IA++ G I+ + + F W++D P ++   E   + D A         H+ FT P      
Sbjct: 404 EIAKKTGAIDEDAWAFVWVVDAPLFKPTGEAVSEGDVALGHSAWTAVHHAFTSPHPEWID 463

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
             E   G  L    A+ YD+VCNG EI  G IR H  +V  + F  +GI     + +FG 
Sbjct: 464 RFEQHPGEAL----AYAYDIVCNGNEIGGGSIRIHRRDVQERVFDVMGIGAAEAQEKFGF 519

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF  G PPHGGIA G DRIV LL  A ++R+V  FP S    D L  +P+ ++ EQ 
Sbjct: 520 LLDAFAFGAPPHGGIAFGWDRIVALLTKAPSIRDVIAFPKSGGGFDPLTQAPAPITPEQR 579

Query: 585 RELGL 589
           +E G+
Sbjct: 580 KEAGV 584


>gi|19703644|ref|NP_603206.1| aspartyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|24212405|sp|Q8RGJ4|SYD_FUSNN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|19713758|gb|AAL94505.1| Aspartyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 592

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 233/601 (38%), Positives = 352/601 (58%), Gaps = 30/601 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+ G+L + ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLGELRLKNIGEVVTLSGWVDTKRNVSTNLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVIGEVKERSNK--NPNIPTGEIEVFAKEIEILNACDTLPFQISGVDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR+ +  N+  R R+I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRNKMLNNLKMRHRMIMSIRNYMDNAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  + G   +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYIFQRMPYAEAMDRFGSDKPDLRFGVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P      +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIINNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKVISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L   G  +   P+AK L+    +AI  + + + GD  F +A       S     R
Sbjct: 359 YI--KLTADGIAS---PIAKFLSEEEMKAIIEKTEAKTGDVIFIVADKKKVVHSALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT       S+K  DL   
Sbjct: 414 LRIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDLDKF 466

Query: 478 KAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
            A Q        YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF
Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFLDAF 526

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL +
Sbjct: 527 KYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFI 586

Query: 590 R 590
           +
Sbjct: 587 K 587


>gi|325105721|ref|YP_004275375.1| aspartyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324974569|gb|ADY53553.1| aspartyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 582

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 224/592 (37%), Positives = 336/592 (56%), Gaps = 15/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61
           +RTH+CG+L ++D+G  V LSGWV + R  GG+ F+D+RD YGITQ+V  A+ D+     
Sbjct: 2   HRTHTCGELTIADLGKEVILSGWVQKSRDLGGMTFIDVRDRYGITQLVFNADDDAELRAT 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +  E+V+ + G V+ R+ +  N  + TG IE+   ++E+L+ A+  P  +  E +  
Sbjct: 62  ARDLGREFVIKVIGTVIERTNK--NPKMPTGDIEIKVSRLEVLNAAKLPPFLIEDETDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR+ +  N+V R ++   +R  + +++FIE  TP L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRNPVRSNLVLRHKMAQEIRKYLDSQDFIEVETPYLIKSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+EQ+DILN  E + R +F+     +     F R+ YD+A+R YG+DKPD R  +   +
Sbjct: 239 SFIEQEDILNLFEGLTRHMFKTVKGLDIAE--FPRMSYDEAMRLYGSDKPDTRFGMEFVD 296

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE      F VF      N    +           R   D + ++ +         I+ 
Sbjct: 297 ITEIGKGKGFPVFD-----NADIAIGINAKASASYTRKQLDELTDFIKRPQIGATGMIYM 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           R ++ G++     V K  N    +        + GD    +AG +  K      + R  +
Sbjct: 352 RHNDDGSLK--SSVDKFFNEDELKKWSEAFQTEPGDLVLVLAGQNKDKVRKQLNELRLEM 409

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
              LG+ + N F   W++DFP  EW+EE  +    H+PFT P+    +    D  +++A 
Sbjct: 410 GNRLGLRDRNKFAPLWVVDFPLLEWDEETARYHAMHHPFTSPKPEDIAKLDTDPGAVRAN 469

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG EI  G IR H  E+    F ++G + E  + +FG L  AF+ G PPHGGIA
Sbjct: 470 AYDLVINGTEIGGGSIRIHNRELQSLMFKHLGFTPEEAQKQFGFLMDAFEYGAPPHGGIA 529

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G DR+V +  G   +R+V  FP + +  D+++ +PST+  +Q  EL ++  
Sbjct: 530 FGFDRLVSIFAGLDTIRDVIAFPKNNSGRDVMIDAPSTIDEKQKEELSIKTT 581


>gi|309803214|ref|ZP_07697311.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|309810238|ref|ZP_07704083.1| aspartate--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|312871698|ref|ZP_07731786.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872949|ref|ZP_07733009.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312875589|ref|ZP_07735590.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|325912183|ref|ZP_08174581.1| aspartate--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325912686|ref|ZP_08175069.1| aspartate--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|308164722|gb|EFO66972.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308169510|gb|EFO71558.1| aspartate--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|311088843|gb|EFQ47286.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311091471|gb|EFQ49855.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092640|gb|EFQ50996.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|325476133|gb|EGC79301.1| aspartate--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325478107|gb|EGC81236.1| aspartate--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 612

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 224/593 (37%), Positives = 349/593 (58%), Gaps = 17/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG++        V + GWV RVR  G +IF+D+RD  GI QVV N DS  A  ++A
Sbjct: 4   RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +E+V+ + G V+ RS   +N  I TG++E++A  I +L+ ++  P  +  +    E
Sbjct: 64  QKLGNEYVVEVQGKVVRRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR +L  +I+ R++I++++      E F+   TP L  S+PEGARD+LV
Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S
Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  +    E +L+ V ++   G  +     RI +D+A+ +YG+DKPD+R  + +H++
Sbjct: 241 FLDEKGVQTYTEGLLKKVMKDVM-GIDIVTPIKRITWDEAMNKYGSDKPDIRYDMHLHDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++ F  SEF+VF+  LS N G  +  I  KGG    +R   +   E+ +     G+A++ 
Sbjct: 300 SDIFKDSEFKVFADTLS-NGGV-IKGIAVKGGAEAYSRKKIEEKQEYIKRYHAKGIAWVK 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E+G     GP+A+ L       +    ++  G+    IA D  K  + + D  R  
Sbjct: 358 Y---ENGEFT--GPIARFLTENQKRDLISEFELTGGELITIIA-DIWKVVTDSLDYLRRT 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GII  + F+F W++D+P +E++E +++   AH+PFTMP      L   +     A
Sbjct: 412 FAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE    +FG L  A   G PPH G+
Sbjct: 472 RSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFLLEALDMGFPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR  MLL    N+R+V  FP + +  + +M SP+ V+ +QL +LG+ ++
Sbjct: 532 AIGLDRFAMLLAEKDNIRDVIAFPKNASASEPMMHSPAPVADKQLADLGINVM 584


>gi|298484029|ref|ZP_07002198.1| aspartate--tRNA ligase [Bacteroides sp. D22]
 gi|298269810|gb|EFI11402.1| aspartate--tRNA ligase [Bacteroides sp. D22]
          Length = 587

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           +RTH+CG+L +SDV   V LSGWV R R  GG+ F+D+RD YGITQ+V N +  +   E 
Sbjct: 2   FRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  R ++  NANI TG IE+   ++ +L+ A   P  +    +  
Sbjct: 62  ANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR+ +  N+  R ++   +R  + +  FIE  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI+ T E + + +F+    G  ++  F R+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQEDIITTFEGMAKHLFKTL-RGVELNEPFQRMSWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y V  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDVMKGHGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419
            R++  G V     V K       + ++     + GD    ++GD  +K      + R  
Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     +   D  +++A
Sbjct: 410 MGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H +++  + F  +G + E  E +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVINGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAEAQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQSQLDELNL 579


>gi|227514592|ref|ZP_03944641.1| aspartate--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087003|gb|EEI22315.1| aspartate--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 591

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/599 (39%), Positives = 352/599 (58%), Gaps = 18/599 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT+  G      +G  V + GWV + R  GG+IF+D+ D  GI Q+V N   D A FE+A
Sbjct: 3   RTNYAGRTSEEQIGQEVVVKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEEEDQAAFEVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              R++++L   GLV +R+   +N +I TG+IE+  ++ +IL+ ++  P  V  + +  E
Sbjct: 63  NQARNQYILEARGLVRARA--EVNPDIATGKIEIEVKEAKILAKSQTPPFKVQDDVDASE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR++DLRR  +   +  R+++ + +       +F++  TP LT S+PEGARD++V
Sbjct: 121 DLRLKYRYVDLRRPKMMNYLKLRSKVTSIVHNYFDNNDFLDVETPELTRSTPEGARDYIV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLMA+G D+Y+QIA CFRDED R DR P EF Q+D EMS
Sbjct: 181 PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQIAKCFRDEDLRGDRQP-EFTQIDTEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F E ++I    E +++ V +E + G  V   F R+ + +A+ +YG+DKPD R  +++ +V
Sbjct: 240 FAEPEEIQAMAEGLIKRVMKE-AVGVDVPTPFPRMEWQEAMDKYGSDKPDTRFDMLIQDV 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++    S F+VFS   +V  G  V AI   GG    +R    +  ++ +  G  GLA++ 
Sbjct: 299 SDLVKDSSFKVFSA--TVADGNFVRAIVVPGGADKYSRKDITKKEDYIKRYGAKGLAWV- 355

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ E G     GPVAK LN  +  A+  RL  + GD   F+AG     C      R  I
Sbjct: 356 -KVTEEGY---NGPVAKFLND-DANALNERLSAKVGDLVLFVAGSFHVVCDSLGYLRESI 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESL-KGNDLLSIK 478
           A+EL +I+ N F + W++++P +E++E   K   AH+PFTM  +  ++ L +G D     
Sbjct: 411 AKELDLIDENKFNYLWVINWPMFEYDEGFGKWIAAHHPFTMLNEDDLKYLEEGEDPHQAH 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG EI  G IR H  EV  + F  +G +KE  + RFG L +A + GMPP GG
Sbjct: 471 AQSYDIVLNGNEIGGGSIRIHDPEVQEKVFKALGYTKEAAQARFGFLIKALENGMPPEGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DR VMLL  A ++R+V  FP +    + L  +P TV  EQL  L L + E PK+
Sbjct: 531 MAFGLDRWVMLLAHADSIRDVIAFPKNSKAVEPLTAAPGTVDDEQLEVLHLNVEEAPKE 589


>gi|295692849|ref|YP_003601459.1| aspartyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030955|emb|CBL50434.1| Aspartyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 617

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/603 (37%), Positives = 352/603 (58%), Gaps = 17/603 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +G  V L GWV RVR  G ++F+D+RD  G+ Q+V N DS     +IA
Sbjct: 7   RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKKLMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E+V+ + G V+ RS   +N ++ TGQ+E+ A +I IL+ A+  P  +    E  E
Sbjct: 67  DSLGNEYVVQVKGKVVKRS--EVNPDMKTGQVEVDATEIIILNKAKNPPFEIKDGIEVSE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +++ I +  E +L+ + ++   G  +     RI + D++ +YG DKPD R  +++H++
Sbjct: 244 FADEETIQSYTEGLLKKIMKDV-KGFDLKTPIKRITWTDSMNKYGCDKPDTRYGMLIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS   ++  G  V  I  K G    +R   D+  ++ +     GLA++ 
Sbjct: 303 SPIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKEYSRKKIDKKADFIKRFHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E G  +  GPVA+ L   N EA++   D++ G+   F+A D  K C  + D  R  
Sbjct: 361 F---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFVA-DKWKVCCDSLDHLRRE 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GI+    ++F W++D+P +E++E   +   AH+PFTMP      L   +     A
Sbjct: 415 FAKETGIVPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHKAHA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H   +    F  +G +K+    +FG L  A   G PPH G+
Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           A G+DR  M+L    N+R+VS FP + +  + +M +P+ V+ +QL +LG+ + E  +  +
Sbjct: 535 AIGLDRFAMMLADKDNIRDVSAFPKNASASEPMMHAPAPVADQQLADLGIEVEEKYQDSV 594

Query: 600 KIS 602
           K +
Sbjct: 595 KAT 597


>gi|238796293|ref|ZP_04639802.1| Aspartyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238719738|gb|EEQ11545.1| Aspartyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 598

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/591 (38%), Positives = 342/591 (57%), Gaps = 11/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANALNIINRSE--PLPLDSNQINSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V A+   GG    R   D   ++    G  GLA++   
Sbjct: 297 DLVKEVEFKVFSGPANDAKG-RVAALRVPGGAQVTRKQIDEYGQFVGIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK L+    EAI  R   + GD  FF A D  K  + A  A R  + 
Sbjct: 356 NRAAGMEGVQSPIAKFLSAEVLEAILTRTQAESGDILFFGA-DSNKIVTDAMGALRLKVG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +     +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  
Sbjct: 415 RDLQLTQLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKEMSPAELAAAPTTAIANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H +E+  Q F  +GI++     +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V
Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584


>gi|237713222|ref|ZP_04543703.1| aspartyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262406638|ref|ZP_06083187.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294807778|ref|ZP_06766569.1| aspartate--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229446689|gb|EEO52480.1| aspartyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262355341|gb|EEZ04432.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294445016|gb|EFG13692.1| aspartate--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 587

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           +RTH+CG+L +SDV   V LSGWV R R  GG+ F+D+RD YGITQ+V N +  +   E 
Sbjct: 2   FRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  R ++  NANI TG IE+   ++ +L+ A   P  +    +  
Sbjct: 62  ANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR+ +  N+  R ++   +R  + +  FIE  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI+ T E + + +F+    G  ++  F R+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQEDIITTFEGMAKHLFKTL-RGVELNEPFQRMSWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y V  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419
            R++  G V     V K       + ++     + GD    ++GD  +K      + R  
Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQQMKDAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     +   D  +++A
Sbjct: 410 MGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H +++  + F  +G + E  E +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVINGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAEAQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQSQLDELNL 579


>gi|288926986|ref|ZP_06420881.1| aspartate--tRNA ligase [Prevotella buccae D17]
 gi|288336232|gb|EFC74618.1| aspartate--tRNA ligase [Prevotella buccae D17]
          Length = 587

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 231/601 (38%), Positives = 342/601 (56%), Gaps = 26/601 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT +CG+L +SD G+ V L+GWV R R  GG+ F+D+RD YGITQ+V N   + A  E 
Sbjct: 2   YRTKTCGELRLSDAGTEVTLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEADNRALCEE 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + + G V  R ++  N N+ TG IE+    + +LS +   P  +    +  
Sbjct: 62  ANKLGREYCVQVKGRVSERQSK--NPNMDTGDIEIIVSALTVLSPSLTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LD+RR  + KN+  R R+   +R  + +  F+E  TPIL  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDIRRAAVRKNLELRHRMTILIRNFLDSRQFMEVETPILIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM +G DRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGVDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D+LN  E++ R +F+E            R+ + DA+RRYG+DKPD+R  +    
Sbjct: 239 SFVEQEDVLNIFEDMARHLFKEIRGVELPP--LERMKWHDAMRRYGSDKPDVRFGMEFVE 296

Query: 302 VTEHFV-HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359
           + E F     F VF +   +        +P       +   +  +   R Q G  GL +I
Sbjct: 297 LKEAFAGKGAFSVFDEAAYIGG----ICVPGCADYSRKQLNELTDFVKRPQVGAKGLVFI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-----PLKFCSFAA 414
            ++ D  G V     + K  +      I+  +  +DGD    ++GD      ++ CS   
Sbjct: 353 KYQAD--GTVK--SSIDKFYSPEVLAEIKQTMGAKDGDLVLILSGDNANKTRVQLCSL-- 406

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L     
Sbjct: 407 --RLEMGDRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDLPLLDEHP 464

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YD VCNG E+  G +R H + +  + F  +G + E  E +FG L  AF+ G P
Sbjct: 465 EQVRAVAYDFVCNGIEVGGGSLRIHDTRLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAP 524

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PH G+A G+DR V +L G  ++R+   FP + +  D+++ +P T+  +QL EL L++VE+
Sbjct: 525 PHAGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLDAPGTIDQKQLDELQLKLVES 584

Query: 595 P 595
           P
Sbjct: 585 P 585


>gi|152979848|ref|YP_001354789.1| aspartyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|151279925|gb|ABR88335.1| Aspartyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 601

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 231/594 (38%), Positives = 343/594 (57%), Gaps = 12/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG    + +   V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 4   RTHYCGLTSEALLDQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRVDVFKAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +VR+E+ L I G+V SR   T N+N+ +G+IE+ A ++E+L+ +   P  +  +    E+
Sbjct: 64  AVRNEFCLRITGVVRSRPEGTSNSNLTSGKIEVLAHELEVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQNNLRLRYKVTMEVRKFLDAQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGHFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+   N + + N F  + Y  A+  YG+DKPD+R  +   ++T
Sbjct: 242 MNEQEIRDLFEGMIRLVFKNALNVD-LPNPFPVMDYATAMGLYGSDKPDMRVKLAFTDLT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
                 EF+VFS   ++  G  V      GG   R+  D   ++    G  GLAYI    
Sbjct: 301 SIMKDVEFKVFSGAANMEGGRVVGLRVPGGGAMPRSEIDAYTQFVAIYGAKGLAYIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+++      I      +DGD  FF A D  K  + A  A       
Sbjct: 361 KAKGRDGLQSPIVKNIHDEALAKIIEATGAEDGDLIFFGA-DKAKVVNDAIGALRVKVGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   ++ G+ + + +   W++DFP +E++EE ++    H+PFT P+ G E L   D    
Sbjct: 420 SDFGKKSGLFD-DEWRPLWVVDFPMFEFDEENQRWSATHHPFTAPKDGHEDLMETDPGKC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+E+  G +R H ++V  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 IAKAYDMVLNGWELGGGSVRIHRADVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+
Sbjct: 539 GLAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSEVDEKQLRELHIRL 592


>gi|184155309|ref|YP_001843649.1| aspartyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
 gi|238692970|sp|B2GBY7|SYD_LACF3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|183226653|dbj|BAG27169.1| aspartyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 591

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/599 (39%), Positives = 352/599 (58%), Gaps = 18/599 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT+  G      +G  V + GWV + R  GG+IF+D+ D  GI Q+V N   D A FE+A
Sbjct: 3   RTNYAGRTSEEQIGQEVVVKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEEEDQAAFEVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              R++++L   GLV +R+   +N +I TG+IE+  ++ +IL+ ++  P  V  + +  E
Sbjct: 63  NQARNQYILEARGLVRARA--EVNPDIATGKIEIEVKEAKILAKSQTPPFEVQDDVDASE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR++DLRR  +   +  R+++ + +       +F++  TP LT S+PEGARD++V
Sbjct: 121 DLRLKYRYVDLRRPKMMNYLKLRSKVTSIVHNYFDNNDFLDVETPELTRSTPEGARDYIV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLMA+G D+Y+QIA CFRDED R DR P EF Q+D EMS
Sbjct: 181 PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQIAKCFRDEDLRGDRQP-EFTQIDTEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F E ++I    E +++ V +E + G  V   F R+ + +A+ +YG+DKPD R  +++ +V
Sbjct: 240 FAEPEEIQAMAEGLIKRVMKE-AVGVDVPTPFPRMEWQEAMDKYGSDKPDTRFDMLIQDV 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++    S F+VFS   +V  G  V AI   GG    +R    +  ++ +  G  GLA++ 
Sbjct: 299 SDLVKDSSFKVFSA--TVADGNFVRAIVVPGGADKYSRKDITKKEDYIKRYGAKGLAWV- 355

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ E G     GPVAK LN  +  A+  RL  + GD   F+AG     C      R  I
Sbjct: 356 -KVTEEGY---NGPVAKFLND-DANALNERLSAKVGDLVLFVAGSFHVVCDSLGYLRESI 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESL-KGNDLLSIK 478
           A+EL +I+ N F + W++++P +E++E   K   AH+PFTM  +  ++ L +G D     
Sbjct: 411 AKELDLIDENKFNYLWVINWPMFEYDEGFGKWIAAHHPFTMLNEDDLKYLEEGEDPHQAH 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG EI  G IR H  EV  + F  +G +KE  + RFG L +A + GMPP GG
Sbjct: 471 AQSYDIVLNGNEIGGGSIRIHDPEVQEKVFKALGYTKEAAQARFGFLIKALENGMPPEGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DR VMLL  A ++R+V  FP +    + L  +P TV  EQL  L L + E PK+
Sbjct: 531 MAFGLDRWVMLLAHADSIRDVIAFPKNSKAVEPLTAAPGTVDDEQLEVLHLNVEEAPKE 589


>gi|309805175|ref|ZP_07699227.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165409|gb|EFO67640.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 612

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 225/593 (37%), Positives = 349/593 (58%), Gaps = 17/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG++        V + GWV RVR  G +IF+D+RD  GI QVV N DS  A  ++A
Sbjct: 4   RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +E+V+ + G V+ RS   +N  I TG++E++A  I +L+ ++  P  +  +    E
Sbjct: 64  QKLGNEYVVEVQGKVVRRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR +L  +I+ R++I++++      E F+   TP L  S+PEGARD+LV
Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S
Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  +    E +L+ V ++   G  +     RI +D+A+ +YG+DKPD+R  + +H++
Sbjct: 241 FLDEKGVQIYTEGLLKKVMKDVM-GIDIVTPIKRITWDEAMNKYGSDKPDIRYDMHLHDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E F  SEF+VF+  LS N G  +  I  KGG    +R   +   E+ +     G+A++ 
Sbjct: 300 SEIFKDSEFKVFADTLS-NGGV-IKGIAVKGGAEAYSRKKIEEKQEYIKRYHAKGIAWVK 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E+G     GP+A+ L       +    ++  G+    IA D  K  + + D  R  
Sbjct: 358 Y---ENGEFT--GPIARFLTENQKRDLISEFELTGGELITIIA-DIWKVVTDSLDYLRRT 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GII  + F+F W++D+P +E++E +++   AH+PFTMP      L   +     A
Sbjct: 412 FAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE    +FG L  A   G PPH G+
Sbjct: 472 RSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFLLEALDMGFPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR  MLL    N+R+V  FP + +  + +M SP+ V+ +QL +LG+ ++
Sbjct: 532 AIGLDRFAMLLAEKDNIRDVIAFPKNASASEPMMHSPAPVADKQLADLGINVM 584


>gi|268609348|ref|ZP_06143075.1| aspartyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 592

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 231/592 (39%), Positives = 337/592 (56%), Gaps = 18/592 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62
           RTH CGD  V+++G  V + G+V RVR  GG+IF+ +RD  G+ Q++ N   D A FE A
Sbjct: 10  RTHYCGD--VTEIGKEVVVGGFVERVRDKGGVIFIVLRDRTGVVQLLFNETTDKAIFEKA 67

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S RSE VL + G V  R  E+ N  + TG +E+    + +LS AE  P  +  E +  E
Sbjct: 68  SSCRSEDVLMVKGEVRER--ESKNDKLKTGHVEIFVTDLRVLSKAETPPFEITAETKVNE 125

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR+ L +NI+ R  I    R       F+E  TP++  S+PEGARD+L+
Sbjct: 126 ELRLKYRYLDLRREPLQRNIIMRHEIAKVTREYFYENGFLEIETPMMMKSTPEGARDYLI 185

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ YKQLLM +G+DRY Q+A CFRDED R+DR P EF Q+D+EMS
Sbjct: 186 PSRVHPGKFYALPQSPQIYKQLLMIAGYDRYIQLARCFRDEDLRADRQP-EFTQIDLEMS 244

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +DI   +E  ++ VF+E   G  V     R+ + DA+ RYG+DKPD R    + ++
Sbjct: 245 FVDAEDIQECVEGFIQRVFKEVM-GVDVPTPLPRLTFADAMNRYGSDKPDTRFGFEIQDI 303

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           T+     +F VF    ++  G  V AI  K G     R   D++ + A+  G  GLAYI 
Sbjct: 304 TDTVKDIDFVVFKS--AIEDGSSVRAINVKNGAAAYTRKEIDKLVDHAKGIGAKGLAYIR 361

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W  DE           K L   + E I   +D Q GD     A       S     R   
Sbjct: 362 W-ADEPN-----CSFKKFLADGDLEKICSAVDAQQGDLVLICADKTKTVLSTLGAIRLIC 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +I  + + F WI + PF+E++E+      AH+PFTMP         +D  +++A 
Sbjct: 416 AKKLDVIPEDQYNFLWITEMPFFEYDEDNNTWVAAHHPFTMPMEECLDYLDSDPANVRAK 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +DLV NG E++SG +R    E+  + F  +G++ E ++ +FG L  A++   PPHGG+ 
Sbjct: 476 AWDLVLNGTELSSGSMRITDFELQQKMFEALGMTDEEIQAKFGFLVDAYRYAAPPHGGMG 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+ M++  A ++R+V+ FP  QN  +++   PSTV  + L  LG+ + 
Sbjct: 536 IGLDRLAMIMCKADSLRDVTAFPKVQNASEIMSECPSTVDKDSLDILGIAVT 587


>gi|238922193|ref|YP_002935707.1| aspartyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238873865|gb|ACR73573.1| aspartyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 598

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/587 (38%), Positives = 351/587 (59%), Gaps = 13/587 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           R+H C ++  +D+G  V + GWV + R  G +IF+D+RD  GI Q++ + +      F+ 
Sbjct: 10  RSHRCTEVSSADIGKKVTVMGWVAKRRNLGSLIFVDLRDRSGILQILFDENIIGKEGFDK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A ++R+E+V+ ++G V+ RS   +N N+ TG IE++A+ + ILS +E  P P+    +  
Sbjct: 70  AYTLRNEFVIAVEGEVIKRSG-AVNENLKTGDIEIAAKTLRILSESETPPFPIEENIQTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR KYR LDLRR  +  NI+ R+++    R  +  E F+E  TP+LT S+PEGARD+L
Sbjct: 129 EDIRLKYRCLDLRRPDIQSNIIMRSKVATLTRAFLANEGFLEIETPMLTKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ G FYALPQ+PQ +KQ+LM SG+DRY QIA CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRIHPGKFYALPQSPQLFKQMLMCSGYDRYMQIARCFRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L  +F+E  + + V     R+ + +A+ R+G+DKPDLR  + + N
Sbjct: 248 SFVDVDDVIDVNERLLAYLFKEVLDVD-VKLPIQRMTWQEAMDRFGSDKPDLRFGMELQN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V++      F VF+  L    G  V  I AKG G   R   D + ++A+  G  GLAYI 
Sbjct: 307 VSDIVKDCGFGVFTGAL--ENGGSVRGINAKGQGSMPRKKIDALVDFAKGYGAKGLAYIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D S   +     AK +      A+   +D + GD   F A       +     R  +
Sbjct: 365 IHEDGSYKSS----FAKFMTEDQMNALVKAMDGEAGDLLLFAADRNKIVWNVLGALRVEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ++G+++ + ++F W+ +FP +EW++EE++    H+PFTMP      +   +  +++A 
Sbjct: 421 ANQMGLLDKSDYKFLWVTEFPQFEWSDEEERYVAMHHPFTMPMDEDLDMLETNPGAVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H ++V  + F  +G++ EV   +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTEIGGGSVRIHQADVQSRMFKALGLTDEVANEKFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
            G+DR+VML+    ++R+V  FP  ++   LL  +P  V  +QL EL
Sbjct: 541 YGLDRLVMLMAKRDSIRDVIAFPKVKDATCLLTNAPDVVDAKQLDEL 587


>gi|188990562|ref|YP_001902572.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|229559950|sp|B0RPX9|SYD_XANCB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167732322|emb|CAP50514.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 588

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/601 (39%), Positives = 345/601 (57%), Gaps = 23/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPAEGDANSAEV 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  I TG++E+ A +I IL+ A   PLP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKIRTGKVEVIATRITILNKAA--PLPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEDTRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  +   ++  F R+ + +A+RRYG+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVE-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + +V E    SEF VF+   +   G  V A+   GG   +R   D     A   G  GLA
Sbjct: 296 LVDVAELVKTSEFPVFAAAANDADG-RVAALRIPGGATLSRKQIDDYAAHAAKYGAKGLA 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L ESG V+   P+AK        A+   +   +GD  FF AG   K   F    R
Sbjct: 355 YI--KLSESGEVS--SPIAKFFGEEAFAALLAHVGAANGDIVFFGAGSYNKVSDFMGALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476
               ++ G++    +   W+ DFP +EW+EE ++    H+PFT P    +  L+ N   +
Sbjct: 411 LKAGKDFGLVAAG-WAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTA 469

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPH
Sbjct: 470 V-SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ EQL E+ +++   PK
Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAAEQLAEVHVQV--RPK 586

Query: 597 K 597
           +
Sbjct: 587 Q 587


>gi|33864480|ref|NP_896040.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|46577196|sp|Q7V3X1|SYD_PROMM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33641260|emb|CAE22390.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
          Length = 606

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/609 (38%), Positives = 347/609 (56%), Gaps = 40/609 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R++ CG+L    + S V+L GWV R R HGG+IF+D+RD  G  Q+  +PD     F  A
Sbjct: 2   RSNGCGELRSKHIASNVKLCGWVDRCRDHGGVIFIDLRDRSGTIQITVDPDQGTELFASA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYP 121
           +S+R+E VL I GLV  R A+ IN+ + TG+IE+ A  +E+L+ V   LP  V    E P
Sbjct: 62  ESLRNETVLQITGLVRPRPADAINSKLSTGEIEVLANGLEVLNPVTGNLPFTVSIHDEEP 121

Query: 122 --ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R LDLRR+ + +N+  R   I + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 VKEELRLRHRHLDLRRERMSRNLQLRHTTIKTARHFLEDEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YLVPSRVCSGEWFALPQSPQLFKQLLMVGGLERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q+ IL   E ++  +++    G  +   F R+ + +A+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQEQILKLNERLIAAIWKAV-KGIDLPLPFPRLTWHEAMDRYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP----------AKGGGGNRAFCDRMNEWAR 349
           ++V++      F+VFS  ++     +   +P           K GG      D  NE A+
Sbjct: 300 NDVSDILKDMGFKVFSGAIAAGGSVKCITVPNGNDLISNVRIKPGG------DIFNE-AQ 352

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
             G  GLA+I  R+ +S  +  +G +  +LN     A+  +   + GD   F AG     
Sbjct: 353 KAGAGGLAFI--RVRDSDEIDSIGAIKDNLNSKQKAALLKQTGAKAGDLILFGAGKTATV 410

Query: 410 CSFAADARNHIAQELGIINCN----CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
            S     R  + +ELG+I  +     ++F W++DFP +E N EE +++  H+PF  P   
Sbjct: 411 NSALDRVRQFLGRELGLIPTDQDNKLWQFLWVVDFPMFELNAEENRLEALHHPFCAPN-- 468

Query: 466 MESLKGND-------LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
            +   G+D       L   +A  YDLV NG E+  G +R H +E+  Q    +G+  E  
Sbjct: 469 -KDDLGDDPDAWMERLPQARAQAYDLVLNGLELGGGSLRIHNAELQRQVLQTIGLPLEEA 527

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
           + +FG L  A + G PPHGG+A G+DRIVMLL G  ++R+   FP +Q    L+  +P+ 
Sbjct: 528 KQQFGFLIDALEMGAPPHGGLAFGMDRIVMLLTGEDSIRDTIAFPKTQQARCLMTQAPAG 587

Query: 579 VSVEQLREL 587
           VS  QL EL
Sbjct: 588 VSNHQLEEL 596


>gi|257064755|ref|YP_003144427.1| aspartyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256792408|gb|ACV23078.1| aspartyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 593

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/594 (39%), Positives = 347/594 (58%), Gaps = 21/594 (3%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAK 63
           H+CG+L + DV + V L+GWV R R  G +IF+D+RD  G TQV+ +PD      F+ A+
Sbjct: 13  HTCGELRLKDVDTEVVLTGWVWRTRDLGALIFIDLRDREGYTQVIVDPDCVSAEDFKKAE 72

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+  E+V+ + G V SR     N ++ TG+IE+ A  IEIL+ +   P  +    E  E 
Sbjct: 73  SLGREYVIKVVGKVRSRGEAAFNHDMATGEIEVLASAIEILNTSVTPPFHIEDGSETDEI 132

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R++DLRR  + + I  R  +  +MR  +    FIE  TPIL  S+PEGARDFLVP
Sbjct: 133 MRMKWRYMDLRRPEMFQTIKLRHTVAQAMRGALNKRGFIEVETPILANSTPEGARDFLVP 192

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G FYALPQ+PQQ+KQ+LM  G +RY+QIA CFRDED R+DR P EF Q+D+EMSF
Sbjct: 193 SRPNPGKFYALPQSPQQFKQMLMCGGIERYYQIARCFRDEDLRADRQP-EFTQVDVEMSF 251

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTDKPDLRNPIIMHN 301
           VE +D+++ ME+V++ V E  +    V + F   R+ Y DA+  YG D+PD+R  + + N
Sbjct: 252 VEGEDVMDMMESVMQEVLEAVN----VEHEFPLQRMQYADAMEYYGCDRPDIRFDMKLVN 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMN-EWARSQGQPGLAYI 359
           ++E      F VF+K  +V  G  V A+  KG G  +R   +++    AR  G  G+A+ 
Sbjct: 308 LSEIVRDCGFGVFAK--TVESGGVVKAVNCKGAGDWSRGEIEKLEANVARPNGAKGMAW- 364

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD-SCFFIAGDPLKFCSFAADARN 418
            + +   G     G   K L      AI+  +D + GD  CF     P+     +A  R 
Sbjct: 365 -FAITSEGKEK--GSFIKFLGEETFAAIKEAVDAEPGDLVCFAADKAPVANAVLSA-IRL 420

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           H+A  L I         W+++FP + ++ EE K    H+PFTM     + L  +D L+  
Sbjct: 421 HMADALNIPR-EGHALLWVVNFPMFGYDPEEGKYSAEHHPFTMVPPDQQHLIEDDPLACG 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           ++ YDLV +GFE   G IR H +++  +     G++ E ++ +FG L RA + G PPHGG
Sbjct: 480 SYSYDLVMDGFEAGGGTIRVHNADLQRRVLRRCGLTDEEIDEKFGHLLRALELGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IA G+DR+VMLL G +++R+V  FP + +  D +  +PS V+  QL E+ LR++
Sbjct: 540 IALGLDRLVMLLAGKQSIRDVIAFPKTTSASDPMTNAPSEVTERQLTEVNLRLM 593


>gi|227111612|ref|ZP_03825268.1| aspartyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 598

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/591 (39%), Positives = 344/591 (58%), Gaps = 11/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F++A 
Sbjct: 2   RTNYCGQLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    IN ++ TG++E+ A  + I++ +E LPL     +   E 
Sbjct: 62  ELRNEFCIQLTGVVRARPESQINKDMATGEVEIFATALTIVNRSEALPLD--SNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLRR  + + +  R RI + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKFRYLDLRRPEMAQRLKTRARITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++++    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLVRELWQDVKGVDL--GDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V AI   GG   +R   D   ++    G  GLAYI   
Sbjct: 297 DLVKDIEFKVFSGPANDAKG-RVAAIRVPGGAQLSRKQIDEYGKFIEIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK L+     A+  R   QDGD  FF A D  K  + A  A R  + 
Sbjct: 356 ERAKGLEGVQSPVAKFLSEDVLSAVLDRTAAQDGDILFFGA-DSAKVVTDALGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +   N +E  W++DFP +E  + E  +   H+PFT P+  + S    + +S  A  
Sbjct: 415 RDLSLTKDNSWEPLWVVDFPMFE-EDGEGGLAAMHHPFTAPRDMLPSELAANPVSAIANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+    FS +GI+++    +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHSGEMQQTVFSILGITEQEQREKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V
Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLEELAIAVV 584


>gi|184201002|ref|YP_001855209.1| aspartyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183581232|dbj|BAG29703.1| aspartyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 604

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 227/600 (37%), Positives = 335/600 (55%), Gaps = 29/600 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH  RTH  G L   ++G  V L+GWV R R HGG+ F+D+RD  G+ Q+V   +    +
Sbjct: 1   MHVLRTHELGALSAENIGETVTLAGWVGRRRDHGGVAFVDLRDASGVAQIVVRDEEQFHQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +    R+E+VL + G V  R     N N+ +G++E+   ++ +L+ A  LP  +    E 
Sbjct: 61  L----RNEYVLQVTGTVERRPEGNENPNLPSGEVEVMVDELTVLNTAAPLPFQIDEHVEV 116

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR    + +  R+ +    R  +  + F E  TP LT S+PEGARDF
Sbjct: 117 GEEARLKYRYLDLRRPEPARIMRLRSEVNRVARTLLHEQGFTEVETPTLTRSTPEGARDF 176

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLL   G ++YFQIA C+RDED R+DR P EF QLD+E
Sbjct: 177 LVPARLAPGSWYALPQSPQLFKQLLQVGGIEKYFQIARCYRDEDFRADRQP-EFTQLDVE 235

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SFVE+DD++   E +++ ++     G  ++    R+ Y  A+  YG+DKPDLR  + + 
Sbjct: 236 ASFVEEDDVIALGEQIVKALWALI--GVDITTPIPRMTYAQAMADYGSDKPDLRFDLKLT 293

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
            +TE+F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+
Sbjct: 294 ELTEYFKDTPFRVFQAPY-------VGAVVMPGGASQPRRQLDAWQEWAKQRGAKGLAYV 346

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            ++  E G +A  GPVAK+++      +   +  + GD  FF AG      +    AR  
Sbjct: 347 LFK--EDGEIA--GPVAKNISEAEKAGLAEAVGAKPGDCVFFAAGAVKTSRALLGAARVE 402

Query: 420 IAQELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESL 469
           I   +G+I+ N + F W++D P +E  ++  +  D A         H+ FT P+      
Sbjct: 403 IGHRVGLIDENDWAFVWVVDAPLFEPASDAVESGDVAVGSGAWTAVHHAFTSPKPEFMDT 462

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              D  S  A+ YD+VCNG EI  G IR H  +V  + F  +G+S+E    +FG L  AF
Sbjct: 463 FDTDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQDRVFRVMGLSEEDAREKFGFLLDAF 522

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           Q G PPHGGIA G DR+V LL G +++R+V  FP + N  D L  +P+ ++ +Q ++ G+
Sbjct: 523 QFGAPPHGGIAFGWDRVVALLAGTESIRDVIAFPKTGNGYDPLTAAPAPITAQQRKDAGV 582


>gi|317503259|ref|ZP_07961314.1| aspartate--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315665616|gb|EFV05228.1| aspartate--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 585

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 228/601 (37%), Positives = 345/601 (57%), Gaps = 34/601 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT++CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   D +  + 
Sbjct: 2   YRTNTCGELRLSDAGKEVVLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEADDRSLCDA 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + I G+V  R ++  N  I TG IE+  + ++ILS +   P  +  E +  
Sbjct: 62  ANKLGREYCIQIKGVVSERQSK--NPKIDTGDIEILVKTLQILSPSLTPPFTIEDESDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR+ + KN+  R R+   +R  + ++NFIE  TPIL  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRNAVRKNLELRHRMTILIRNFLDSQNFIEVETPILIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++N  E + R +F+E            ++ + +A++R+G+DKPDLR  +    
Sbjct: 239 SFVDQDDVINLFEEMARHLFKEIRGVEL--PKLQQMTWHEAMKRFGSDKPDLRFGMEFVE 296

Query: 302 VTEHFV-HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359
           + + F     F VF +   +        +P       +   +  +   R Q G  GL YI
Sbjct: 297 LKDAFAGKGTFSVFDEAKYIGG----ICVPGCADYSRKQLNELTDFVKRPQVGAKGLVYI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTE----AIRVRLDMQDGDSCFFIAGDP-----LKFC 410
            +  D        G +   ++   +E     I+  +   DGD    ++GD      ++ C
Sbjct: 353 KYNTD--------GTIKSSIDKFYSEDELLEIKKVMGANDGDLVLILSGDNANKTRIQLC 404

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           +     R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L 
Sbjct: 405 AL----RLEMGDRLGLRDKNVFKCLWIIDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLL 460

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            +    ++A  YD VCNG E+  G +R H +++  + F  +G +KE  E +FG L  AF+
Sbjct: 461 ESQPEKVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTKERAEAQFGFLMNAFK 520

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPH G+A G+DR V +L G  ++R+   FP + +  D+++ +P  +  +QL EL L+
Sbjct: 521 YGAPPHAGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLDAPGMLDQKQLDELQLK 580

Query: 591 I 591
           +
Sbjct: 581 L 581


>gi|295426089|ref|ZP_06818759.1| aspartate--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295064258|gb|EFG55196.1| aspartate--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 618

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 227/604 (37%), Positives = 351/604 (58%), Gaps = 23/604 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++     G  V L GWV RVR  G ++F+D+RD  GI Q+V N DS     +IA
Sbjct: 7   RTDYCGNITTKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQIVVNKDSGKELMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E+ + + G V+ RS   +N ++ TG++E+ A +I+IL+ ++  P  +  +    E
Sbjct: 67  DSLGNEYCIEVKGKVVKRS--DVNPDMKTGEVEVYATEIDILNKSKVPPFEIKDDINAAE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR TL + I+ R +I+ ++        FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPTLQRAIILRAKILKAVHEFFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  + +  E +L+ V ++   G  +     RI + +++ +YG DKPD R  + +H++
Sbjct: 244 FLDEKGVEDYTEGLLKKVMKDVM-GIDLKTPIKRITWTESMNKYGCDKPDTRYEMFIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS  ++ + GY V  +  K G    +R   D   ++ +     GLA++ 
Sbjct: 303 SPIFKDSDFKVFSGAIA-DGGY-VKGLAVKNGAKAYSRKKIDEKADYIKRYHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E G  +  GPVA+ L   N EA++    ++ G+   F+A D  K C    DA NH+
Sbjct: 361 Y---EDGEFS--GPVARFLTDENKEALKKEFGLEGGELVVFVA-DKWKVC---CDALNHL 411

Query: 421 ----AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
               A E  II    F+F W++D+P +E++E   +   AH+PFTMP      L   D   
Sbjct: 412 RREFAHETDIIPKGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHK 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG E+  G IR H   +  + F  +G +K     +FG L  A   G PPH
Sbjct: 472 AHARSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKRRAYEQFGYLMDALDMGFPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+A G+DR  M+L    N+R+V+ FP + +  + +M +P+ V+ +QL ++G+++  + +
Sbjct: 532 AGLAIGLDRFAMMLAQKDNIRDVTAFPKNASASEPMMHAPAPVTDQQLEDIGIQVDPSFE 591

Query: 597 KILK 600
           K +K
Sbjct: 592 KSVK 595


>gi|115374727|ref|ZP_01462004.1| aspartyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|310822725|ref|YP_003955083.1| aspartyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115368298|gb|EAU67256.1| aspartyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309395797|gb|ADO73256.1| Aspartyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 607

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 229/602 (38%), Positives = 343/602 (56%), Gaps = 16/602 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH+CG L    VG  V L GWV   R HGG +F+D+RD  G+TQVV  PD+    E+A 
Sbjct: 11  RTHTCGQLTKEQVGQEVVLFGWVQNRRDHGGAVFIDLRDREGLTQVVFEPDAKEAHELAG 70

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R E+ + + G V+SR  + +N  + TG+IE+ A  + I + +E  P  +    E  E 
Sbjct: 71  QLRLEFCIGVRGKVISR-GKNVNPKMKTGEIEVKADALTIFNRSEPTPFLIEDSIETAED 129

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R+LDLRR  L ++++ R+++    R  M+   F+E  TP +   +P GAR+FLVP
Sbjct: 130 KRLAHRYLDLRRKPLQQSLMTRSKMNALTRAYMVENGFLELETPFMGKYTPGGARNFLVP 189

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+N G FYAL ++PQ YKQL M +GFDRYFQI  CFRDED R DR P EF Q+D+EMSF
Sbjct: 190 SRLNPGKFYALAESPQLYKQLFMVAGFDRYFQIVKCFRDEDLRLDRQP-EFTQIDVEMSF 248

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR----NPIIM 299
           V QDDI   +E +++ +++E   G  V   F+R+ +D+++ +YG DKPDLR    + ++ 
Sbjct: 249 VTQDDIFTIIEGLIQKLWKEVL-GVDVPTPFMRMNFDESMAKYGNDKPDLRFGLEHIVLT 307

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             + EH       +  + +      +   IPA     +RA  D++ E+A+  G  GLA  
Sbjct: 308 DLIREHGEGGGVPLIWEAVQHKGIVKAMVIPAD-KALSRAESDKLEEFAKQAGARGLARA 366

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G      P+AK ++    +AI    + + GD   F  G      +  A+ R H
Sbjct: 367 --KVGEGGEWT-QSPLAKTISPALRQAINQACNAKTGDLLLFQFGRESLVHTVMANLRVH 423

Query: 420 IAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           +A++LG+I    +   + F W+++ P +E++EE K    AH+ FT P  G       D  
Sbjct: 424 VAKKLGLIPEYGSGGNWRFLWVVNPPLFEYDEESKTWAAAHHAFTRPHDGDVEYLLTDPG 483

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            +K  +YD+V NGFEI  G IR H  +V  + F  +GI +E    +FG L  A + G PP
Sbjct: 484 RVKCHRYDVVLNGFEIGGGSIRLHDPKVQAEVFKALGIEEEEARMKFGFLLDALKYGAPP 543

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL  A+++R+V  FP ++   DL+  +P  V   QL+E+ +R V  P
Sbjct: 544 HGGIALGMDRLVMLLTSAESLRDVIPFPKTKTGTDLMTSAPGDVDERQLKEIHVRSVPPP 603

Query: 596 KK 597
            +
Sbjct: 604 TQ 605


>gi|116074179|ref|ZP_01471441.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetase, class I
           [Synechococcus sp. RS9916]
 gi|116069484|gb|EAU75236.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetase, class I
           [Synechococcus sp. RS9916]
          Length = 611

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 228/604 (37%), Positives = 344/604 (56%), Gaps = 30/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL    +   V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSNGCGDLRKQQIDEQVKLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGAEAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119
           + +RSE VL + G V +R  E++N  + TG +E+ A  I +L+ V   LP PV    E  
Sbjct: 62  EHLRSETVLQVSGKVRARPTESLNDRLATGDVEVLASAITVLNGVKGNLPFPVSIHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR  ++ N+  R + I + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAQTIQTARSFLEDEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G ++Y+Q+A CFRDED R+DR P EF QLDM
Sbjct: 182 YILPSRVCGGEWFALPQSPQLFKQLLMVGGIEKYYQVARCFRDEDLRADRQP-EFTQLDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ Q++IL+  E ++  +++    G  +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 241 EMSFMGQEEILDLNERLICSIWKTV-KGIELPRPFPRMTWHDAMERYGTDRPDTRYCMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351
            NV++      F+VFS  +      +  A+P    GGN A          D  +E A+  
Sbjct: 300 TNVSDIVKDMGFKVFSGAVKNGGSVKCIAVP----GGNDAVSNVRIKPGGDVFSE-AQQA 354

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLA+I  R+ + G +  +G +  +L+      +  R   + G    F AGD      
Sbjct: 355 GAGGLAFI--RVRDGGEIDSIGAIKDNLSEEQKAELLSRTGAEPGTLILFGAGDTATVNK 412

Query: 412 FAADARNHIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ---- 463
                R ++A+ELG++    + + + F W++DFP +E+N +E + +  H+PF  P     
Sbjct: 413 ALDRVRQYLARELGMVKPDQDNDQWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNTDDL 472

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
           G       N L   +A  YDLV NG E+  G +R H S +  Q    VG+  E  + +FG
Sbjct: 473 GSDADQWANTLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQEQFG 532

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            L  A   G PPHGG+A G+DR+VMLL G +++R+   FP +Q    L+  +P+ V+ +Q
Sbjct: 533 FLIEALDMGAPPHGGLAFGLDRMVMLLAGEESIRDTIAFPKTQQARCLMTAAPAGVAGKQ 592

Query: 584 LREL 587
           L EL
Sbjct: 593 LEEL 596


>gi|238754857|ref|ZP_04616207.1| Aspartyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238706868|gb|EEP99235.1| Aspartyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 598

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 231/592 (39%), Positives = 345/592 (58%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDRDGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQIIGTVRARPESQINKDMSTGEVEIFAHSLNIINRSE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++  +       +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMERMVRQLWQ--TTKGVDLGDFPIMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF+   + +P   V AI   GG    R   D   ++    G  GLA++   
Sbjct: 297 DLVRDVEFKVFAGPAN-DPNGRVAAIRVPGGAQITRKQIDEYGQFVGIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK L+    EAI  R     GD  FF A D +K  + A  A R  + 
Sbjct: 356 DRAAGLEGVQSPIAKFLSAEVLEAILARTQAASGDILFFGA-DSVKIVTDAMGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +++ +     ++  W++DFP +E ++ +  +   H+PFT P+    E L  N   +I A 
Sbjct: 415 RDMDLTKLGTWQPLWVVDFPMFE-DDSDGGLTAMHHPFTAPKDMSPEELAANPTSAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+  Q F  +GI++     +FG L  A + G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V
Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584


>gi|270284250|ref|ZP_05965803.2| aspartate--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277405|gb|EFA23259.1| aspartate--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 614

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 227/605 (37%), Positives = 348/605 (57%), Gaps = 39/605 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   D+    VG  V+LSGWV R R HGG+ F+D+RD  G+ QVV N +    E+A+
Sbjct: 22  YRTHHATDVTEDLVGQRVKLSGWVDRRRDHGGVAFIDLRDSSGVVQVVINDE----EMAR 77

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG------E 117
            +RSE+V+ ++G V  R     N ++ TG++E+  + +++L+ ++ LP  V        E
Sbjct: 78  PLRSEFVVELEGTVRMRPEGNENPHMRTGKVEVEVESLDVLAKSDALPFQVSTVLANETE 137

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR ++ +NI  R+ ++ + R  +    F E  TP +  S+PEG
Sbjct: 138 GKLPGEDVRLKYRYLDLRRPSMARNIKLRSDMMKAARTVLDEMGFTEVETPTMIKSTPEG 197

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM +G +RY+Q A C+RDED R+DR P EF Q
Sbjct: 198 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVAGVERYYQFARCYRDEDFRADRQP-EFTQ 256

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294
           LDMEM+FV+Q+D++   E +++ +++  + G+ V     RI + DA+ +YG+DKPDLR  
Sbjct: 257 LDMEMAFVDQEDVMAMTERLIQAIWK--AAGHDVQLPLPRITWQDAMDKYGSDKPDLRFG 314

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353
           NP++   +T++F ++ FRVF           V A+  KGG    R   D   +WA+ +G 
Sbjct: 315 NPLV--ELTDYFKNTPFRVFQAPY-------VGAVLFKGGAATPRRQFDAWQDWAKQRGA 365

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAYI     E+G +   GPVAK+++      ++  +  +DGD+ FF AG         
Sbjct: 366 KGLAYIV--FGENGEIK--GPVAKNISEEERNGLKAAVGAEDGDAVFFAAGAREASQMLL 421

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464
              R  +A   G++  + F F W++DFP ++  ++    D A         H+PFTMP  
Sbjct: 422 GAVRVELADRAGLLKPDDFAFTWVVDFPLFKKADDPDDDDVAVGHSKWTSMHHPFTMPSK 481

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D     +  YD+VCNG E+  G +R H  ++  +    +GI +   +++FG 
Sbjct: 482 DWLDTFDQDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLEVLGIDEAEAQDKFGF 541

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPH GIA G DR   +L G+ ++R+V  FP +    D L G+P+ +S EQ 
Sbjct: 542 LLEAFKYGAPPHAGIALGWDRTAAILSGSDSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 601

Query: 585 RELGL 589
            E G+
Sbjct: 602 AETGV 606


>gi|258647273|ref|ZP_05734742.1| aspartate--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260852926|gb|EEX72795.1| aspartate--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 590

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/592 (38%), Positives = 344/592 (58%), Gaps = 22/592 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT +CG+L +++VG  V L+GWV R+R  GG+ F+D+RD YGITQ+V N   D+A  E 
Sbjct: 2   YRTKTCGELRLANVGEQVVLAGWVQRLRKMGGMTFVDLRDRYGITQLVFNTETDAALCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+VL + G V  R ++  N  I TG IE+   ++ +L+ +   P  +  E +  
Sbjct: 62  ANQLGREYVLQVTGSVNERFSK--NDKIPTGDIEVIVNELVVLNESLTPPFIIEDETDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYRFLDLRR+ + +N+  R ++   +R  +  + F+E  TP L  S+PEGARDF+
Sbjct: 120 DDLRMKYRFLDLRRNCVRRNMELRHKMTLEVRRFLDEKGFLEIETPALIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM +G DRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGCFYALPQSPQTLKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQDD++NT E + + +F+     +     FLR+ + +A+RR+G+DKPD+R  +    
Sbjct: 239 SFVEQDDVINTFEEMTKYLFKSVRGVDLGEEPFLRLSWAEAMRRFGSDKPDMRFGMEFVE 298

Query: 302 VTEHFVHS-EFRVFSKILSVN----PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           + +    +  F VF++ + +     PG  V+          R   D + ++ RS      
Sbjct: 299 LMDQLKGTGTFGVFNEAVYIGGICVPGCAVY---------TRKQLDELTDFVRSPQIGAK 349

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAAD 415
             ++ R+ E G+V     V K  +      ++ ++  + GD    I+G D  K      +
Sbjct: 350 GLVYARVQEDGSVK--SSVDKFYDAAVLNGLKDKMQARPGDLILIISGPDTQKARKQLCE 407

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  +   LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L  +   
Sbjct: 408 LRLLMGGRLGLRDKNKFALLWVVDFPMFEWSEEESRLMAMHHPFTAPKPEDVGLLDSAPE 467

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + A  YD+VCNG E+  G IR H +E+  + F  +G ++E  + +FG L  AF+ G PP
Sbjct: 468 RVCANAYDMVCNGVEVGGGSIRIHDAELQAKIFKALGFTQESAQEQFGFLMNAFKYGAPP 527

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           HGG+A G+DR V +  G  ++R+   FP + N  D+++ +PSTV  +QL EL
Sbjct: 528 HGGLAYGLDRWVSIFAGLDSIRDCIAFPKNNNGRDVMLDAPSTVDQKQLDEL 579


>gi|167835473|ref|ZP_02462356.1| aspartyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 600

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/601 (38%), Positives = 341/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV SR   TINA + +G+IE+   ++++L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRSRPEGTINAGLTSGKIEVLCHELDVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+  + G  ++  F  + + +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKT-TIGVELAATFPVMPHSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  A+  R   +DGD  FF A D  K  + +  A       
Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAVLERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++E+ +   AH+PFT P+         D    
Sbjct: 420 SEFGRANGLVEAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+   E P
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598

Query: 596 K 596
           K
Sbjct: 599 K 599


>gi|255325074|ref|ZP_05366180.1| aspartate--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297639|gb|EET76950.1| aspartate--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 610

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 237/600 (39%), Positives = 338/600 (56%), Gaps = 31/600 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L     G  V L+GWV R R HGG+IF+D+RD  GI QVV   +S   E A  
Sbjct: 3   RTHLAGELRKELAGETVTLTGWVSRRRDHGGVIFIDLRDRSGIAQVVFR-ESDVAERAHD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121
           +RSE+ + + G V  R   + N N+ +G+IE++   +E+L+ +  LP  +       E  
Sbjct: 62  LRSEYCVKVTGTVEPRPEGSENPNLPSGEIEVNVADLEVLNKSAALPFQIDDPSTSGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR+   + +  R+    + R  + + +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRERQAQALRLRSAANRAARKVLDSHDFAEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G++YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLKPGTWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E ++  +++    G  +     R+ Y DA++ YG+DKPDLR  I +  
Sbjct: 241 SFVDQDDVIALAEEIVTELWKLI--GYEIKTPIPRMTYADAMKYYGSDKPDLRFDIKIVE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360
            TE F  + FRVF           V A+  +GG    R   D   +WA+ +G  GLAYI 
Sbjct: 299 CTEFFKDTTFRVFQNEY-------VGAVVMEGGASQPRRQFDAWQDWAKQRGAKGLAYI- 350

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +   GPVAK++     E I   +  + GD+ FF AGD     +    AR  I
Sbjct: 351 -TVGEDGTLG--GPVAKNITDAEREGIAEHVGAKPGDAIFFAAGDTKSSRALLGAARGEI 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGG-MESL 469
           A++L +I    + F W++D P +E + +            K    H+ FT P+   +++ 
Sbjct: 408 AKKLDLIKEGDWAFTWVVDAPLFEPSADATASGDVALGHSKWTAVHHAFTSPKPEYLDNF 467

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
             N   ++ A+ YD+VCNG EI  G IR H  +V  + F  +GI  E  + +FG L  AF
Sbjct: 468 DQNPGEAL-AYAYDIVCNGNEIGGGSIRIHQQDVQKRVFDVMGIGDEEAQEKFGFLLDAF 526

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           Q G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ +   Q +E G+
Sbjct: 527 QYGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAAIPAAQRKETGV 586


>gi|327443566|gb|EGE90220.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
          Length = 606

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 234/603 (38%), Positives = 337/603 (55%), Gaps = 25/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++    G  +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF       P      +P       R F D   EWAR++G  GLAYI   + 
Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G     GPVAK+++      I  ++  + GD+ FF AG           AR  I +  
Sbjct: 352 DEG--VPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P ++  +E E   D A         H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G  +   
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRRETG--VDAK 587

Query: 595 PKK 597
           PKK
Sbjct: 588 PKK 590


>gi|311742338|ref|ZP_07716147.1| aspartate--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313966|gb|EFQ83874.1| aspartate--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 591

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/600 (39%), Positives = 328/600 (54%), Gaps = 30/600 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    +G  V L+GWV R R HGG+ F+D+R+  G+ QVV        E+A  
Sbjct: 3   RTHDAGTLTADHIGDQVTLAGWVARRRDHGGVAFIDLREASGVVQVVVR-----EEVAHQ 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ L + G+V  R A   N  I TG IE+ A+ +EILS A  LP P+    E  +  
Sbjct: 58  LRAEYCLKVVGIVQRRPAGNENDGIATGAIEVVAEDVEILSAAAPLPFPIDEHVEVGDEA 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR      I  R+++    R  +   +F+E  TP LT S+PEGARDF+VP+
Sbjct: 118 RLKYRYLDLRRSGPAAAIRLRSKVNAVARDVLAQHDFVEVETPTLTRSTPEGARDFVVPA 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 178 RLRPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + DD++   E +   ++        +   F RI Y DA+RRYG+DKPDLR    +   T+
Sbjct: 237 DADDVMALAEQIYVALWRLID--VELPAPFPRITYADAMRRYGSDKPDLRLSTELVECTD 294

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF       P      +P       R F D   EWA+ +G  GLAY+     
Sbjct: 295 YFAETSFRVFQA-----PYVGAVVMPGGASQPRRQF-DAWQEWAKQRGARGLAYV--TFG 346

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L+      +   +  Q GD  FF AG P         AR  I +  
Sbjct: 347 EDGELG--GPVAKNLSDAERAGLAEHVGAQPGDCVFFGAGAPKATRQLLGAARLEIGRRC 404

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQGGMESLKGNDLL 475
            +I+ + + FCW++D+P +E  +E    D A         H+ FT PQ      +    L
Sbjct: 405 DLIDESAWAFCWVVDWPMFEAVDELDSGDVAVGGGEWTAVHHAFTAPQDPATLAEPGTSL 464

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              A  YD+VCNG E+  G +R H  +V  Q F+ +GI +   E++FG L  AF+ G PP
Sbjct: 465 ---AQAYDIVCNGNELGGGSVRIHREDVQKQVFAIMGIDEAEAEDKFGFLLDAFRFGAPP 521

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G DR   LL G  ++REV  FP S    D L  +P+ ++ +Q +E G+     P
Sbjct: 522 HGGIAFGWDRTCALLSGVDSIREVIAFPKSGGGYDPLTAAPAPITAQQRKEAGVDARPAP 581


>gi|332670527|ref|YP_004453535.1| aspartyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332339565|gb|AEE46148.1| aspartyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 591

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 236/602 (39%), Positives = 336/602 (55%), Gaps = 28/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    VG+ V L+GWV R R HGG+ F+D+RD  GI QVV   ++    +A  
Sbjct: 3   RTHHAGSLRAEHVGTTVTLTGWVDRRRDHGGVAFVDLRDASGIAQVVIRDEA----VAHG 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREYPE 122
           +R+E+VL + G V  R     N  + TG++E+ A ++ +L+ +  LP  V    +    E
Sbjct: 59  LRAEYVLQVTGEVGRRPEGNENPQLATGEVEVVAHEVVVLNESAPLPFQVSSSLDETVGE 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R K+R+LDLRR    + +  R +   + R  + A++F+E  TP LT S+PEGARDFLV
Sbjct: 119 EARLKHRYLDLRRPAPARALRLRAKASQAARAVLDAQDFVEVETPTLTRSTPEGARDFLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R++ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMS
Sbjct: 179 PARLSPGSWYALPQSPQLFKQLLMVAGLERYYQIARCYRDEDFRADRQP-EFTQLDVEMS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDD++   E +L  ++        +     R+ + DA+ RYG+DKPDLR  + +  +
Sbjct: 238 FVEQDDVIALGEQILVALWRLVD--VEIPTPIRRMTFADAMARYGSDKPDLRFGLELVEL 295

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFW 361
           T++F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+  
Sbjct: 296 TDYFRETPFRVFQAPY-------VGAVVQPGGASTPRRGFDAWQEWAKQRGAKGLAYV-- 346

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G +   GPVAK++       +        GD+ FF AG   +  +    AR  I 
Sbjct: 347 TVGEDGELG--GPVAKNITEAERAGLVAATGASPGDAIFFAAGPTSEARALLGAARLEIG 404

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQGGMESLKGNDL 474
           +  G+I+   +EF W++D P ++   E+  +          H+ FT P          D 
Sbjct: 405 RRGGLIDEKAWEFVWVVDAPLFKPTGEDDDVAVGGGAWTAVHHAFTSPTPQWIDTFEQDP 464

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A+ YD+VCNG EI  G IR H  +V  + F  +GI  E  + +FG L  AFQ G P
Sbjct: 465 GNALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFEVMGIGPEEAQEKFGFLLDAFQFGAP 524

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRIV LL GA+++REV  FP S    D L  +P+ ++ EQ RE G+     
Sbjct: 525 PHGGIAFGWDRIVALLTGAESIREVIAFPKSGGGYDPLTAAPAPITPEQRREAGVDAKPK 584

Query: 595 PK 596
           PK
Sbjct: 585 PK 586


>gi|167623848|ref|YP_001674142.1| aspartyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189082142|sp|B0TSA3|SYD_SHEHH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167353870|gb|ABZ76483.1| aspartyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 598

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 231/606 (38%), Positives = 345/606 (56%), Gaps = 30/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  GI QVV +PD    F++A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+ + I GLV +R    INA++ TG++E+   ++ IL+ +  LP+ +   +   E 
Sbjct: 62  TLRSEFCVQIKGLVRARPDSQINADMRTGEVEILGLELTILNSSAPLPINMDKNQHNTEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   IV R+++ +++R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMADRIVFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D ++   E ++RG+F+E  N +     F ++ +++A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MSSDQVMAKTEEMVRGLFQELLNVDL--GEFPKMTFEEAMRRFGSDKPDLRNPLELIDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   +   G   V +IP  G   +R   D   ++    G  GLA++   
Sbjct: 299 DIVKEVEFAVFNGPANDPEGRVAVLSIPG-GAKLSRKQLDEYAKYVTIYGAKGLAWMKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             + G      PV K L+    +A+  R   Q GD              F AD  N +A+
Sbjct: 358 DLDKGMEGIQSPVLKFLSEDVVKALLERTGAQTGD-----------LILFGADKANIVAE 406

Query: 423 ELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKG 471
            +G +     E            W++DFP +E    +  +   H+PFT P     E L+ 
Sbjct: 407 SMGALRLKAGEDFDLLQGEWKPLWVVDFPMFE-RTSDGGLHAMHHPFTAPSNMTPEELEA 465

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           N + +I    YD+V NG E+  G +R H S++    F  +GI+ E    +FG L  A + 
Sbjct: 466 NPIAAISD-AYDMVLNGCELGGGSVRIHDSKMQSAVFRILGINDEEATEKFGFLLEALRY 524

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPH G+A G+DRI+ML+ GA ++R+V  FP +      L  +P   +  QL ELG+ +
Sbjct: 525 GTPPHAGLAFGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLAELGVSV 584

Query: 592 VENPKK 597
           VE   K
Sbjct: 585 VEAETK 590


>gi|254302704|ref|ZP_04970062.1| aspartate--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322896|gb|EDK88146.1| aspartate--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 592

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/601 (38%), Positives = 351/601 (58%), Gaps = 30/601 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+ G+L   ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLGELRSKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIKVIGEVKERSNK--NPNIPTGEIEVFAKEIEILNACDTLPFQISGIDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR+ +  N+  R ++I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRNKMLNNLKMRHKMIMSIRNYMDNAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  + G   +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P      +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKVISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L   G  +   P+AK L+    +AI  + + + GD  F +A       S     R
Sbjct: 359 YI--KLTADGITS---PIAKFLSEDEMKAIIDKTEARTGDVIFIVADKKKVVHSALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT       S+K  DL   
Sbjct: 414 LRIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDLDKF 466

Query: 478 KAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
            A Q        YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF
Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFLDAF 526

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL +
Sbjct: 527 KYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFI 586

Query: 590 R 590
           +
Sbjct: 587 K 587


>gi|121603698|ref|YP_981027.1| aspartyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120592667|gb|ABM36106.1| aspartyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 605

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 233/604 (38%), Positives = 351/604 (58%), Gaps = 16/604 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEI 61
           + R++ CG +  S +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD A  F I
Sbjct: 10  QMRSNYCGLVTESLMGQTVSLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRAEMFGI 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+ + + G+V +R   T NA++ +GQ+E+   ++ +L+ +   P  +  +    
Sbjct: 70  AEDVRNEFCVQVKGIVRARPEGTANASLKSGQVEVLCHELIVLNASVTPPFQL-DDDNLS 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R  +R LDLRR  +  N++ R R+    R  + A  FI+  TP+LT S+PEGARD+L
Sbjct: 129 ETTRLTHRVLDLRRPYMQNNLMLRYRVAMETRKFLDANGFIDIETPMLTKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E 
Sbjct: 189 VPSRVNEGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIET 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  + ++  +F+     NT    F  + Y DA+ RYG+DKPDLR  +    
Sbjct: 248 SFMGEQEIRDMFQGMISNMFKTVL--NTDLGEFPVMAYADAMHRYGSDKPDLRVNLEFTE 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +T+     +F+VFS   +  PG  V A+   GG   +R+  D   E+ +  G  GLA+I 
Sbjct: 306 LTDVMADVDFKVFSAP-ATTPGGRVVALRVPGGAEISRSEIDAYTEFVKIYGAKGLAWIK 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA---- 416
                 G      P+ K+++      I  R   Q+GD  FF A D  K  + +  A    
Sbjct: 365 VNDVSKGREGLQSPIVKNIHDAAVAEILKRTGAQNGDILFFGA-DKSKVVNDSIGALRLK 423

Query: 417 --RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
              +   ++ G+     ++  W++DFP +E++E+ K+    H+PFT P+ G E     D 
Sbjct: 424 VGHSVFGKKSGLFT-KGWKPLWVVDFPMFEYDEDGKRWSAVHHPFTAPKDGHEDWMDTDP 482

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               A  YD+V NG+E+  G +R H ++V  + FS + I  E  + +FG L  A Q G P
Sbjct: 483 GRCIAKAYDMVLNGWELGGGSVRIHRADVQSKVFSALNIGPEEAQLKFGFLLDALQYGAP 542

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+  N
Sbjct: 543 PHGGLAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTHAPSPVDEKQLRELHIRL-RN 601

Query: 595 PKKI 598
           P  I
Sbjct: 602 PLPI 605


>gi|282853872|ref|ZP_06263209.1| aspartate--tRNA ligase [Propionibacterium acnes J139]
 gi|282583325|gb|EFB88705.1| aspartate--tRNA ligase [Propionibacterium acnes J139]
 gi|314981340|gb|EFT25434.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315092201|gb|EFT64177.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315092866|gb|EFT64842.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315103613|gb|EFT75589.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|327327435|gb|EGE69211.1| aspartate--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 606

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/603 (38%), Positives = 337/603 (55%), Gaps = 25/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++    G  +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF       P      +P       R F D   EWAR++G  GLAYI   + 
Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G  A  GPVAK+++      I  +   + GD+ FF AG           AR  I +  
Sbjct: 352 DEG--APEGPVAKNISEEEKAGIAEKAGAKPGDAIFFAAGSKTSCQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P ++  +E E   D A         H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G  +   
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587

Query: 595 PKK 597
           PKK
Sbjct: 588 PKK 590


>gi|295130733|ref|YP_003581396.1| aspartate--tRNA ligase [Propionibacterium acnes SK137]
 gi|291376034|gb|ADD99888.1| aspartate--tRNA ligase [Propionibacterium acnes SK137]
 gi|313771978|gb|EFS37944.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313807671|gb|EFS46158.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313810178|gb|EFS47899.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313818708|gb|EFS56422.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313830509|gb|EFS68223.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313833545|gb|EFS71259.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314925087|gb|EFS88918.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314960376|gb|EFT04478.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314973509|gb|EFT17605.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976189|gb|EFT20284.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314978650|gb|EFT22744.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314983789|gb|EFT27881.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|315080487|gb|EFT52463.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315084158|gb|EFT56134.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315085501|gb|EFT57477.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315088442|gb|EFT60418.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315096056|gb|EFT68032.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|327326336|gb|EGE68126.1| aspartate--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327330407|gb|EGE72156.1| aspartate--tRNA ligase [Propionibacterium acnes HL097PA1]
 gi|327331789|gb|EGE73526.1| aspartate--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327445770|gb|EGE92424.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327448247|gb|EGE94901.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|328753321|gb|EGF66937.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328760702|gb|EGF74268.1| aspartate--tRNA ligase [Propionibacterium acnes HL099PA1]
 gi|332675578|gb|AEE72394.1| aspartate--tRNA ligase [Propionibacterium acnes 266]
          Length = 606

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 234/603 (38%), Positives = 337/603 (55%), Gaps = 25/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++    G  +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF       P      +P       R F D   EWAR++G  GLAYI   + 
Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G     GPVAK+++      I  ++  + GD+ FF AG           AR  I +  
Sbjct: 352 DEG--VPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P ++  +E E   D A         H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G  +   
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587

Query: 595 PKK 597
           PKK
Sbjct: 588 PKK 590


>gi|314966612|gb|EFT10711.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
          Length = 606

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/603 (38%), Positives = 337/603 (55%), Gaps = 25/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVNVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++    G  +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF       P      +P       R F D   EWAR++G  GLAYI   + 
Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G  A  GPVAK+++      I  +   + GD+ FF AG           AR  I +  
Sbjct: 352 DEG--APEGPVAKNISEEEKAGIAEKAGAKPGDAIFFAAGSKTSCQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P ++  +E E   D A         H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G  +   
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587

Query: 595 PKK 597
           PKK
Sbjct: 588 PKK 590


>gi|253688202|ref|YP_003017392.1| aspartyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511866|sp|C6DFE7|SYD_PECCP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|251754780|gb|ACT12856.1| aspartyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 598

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 231/591 (39%), Positives = 344/591 (58%), Gaps = 11/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F++A 
Sbjct: 2   RTNYCGQLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    IN ++ TG++E+ A  + I++ +E LPL     +   E 
Sbjct: 62  ELRNEFCIQLTGVVRARPESQINKDMATGEVEIFANALTIVNRSEALPLD--SNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R RI + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRARITSFVRRFMDEHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLVRELWLDVKGVDL--GDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + +F+VFS   +   G  V AI   GG   +R   D   ++    G  GLAYI   
Sbjct: 297 DLVKNIDFKVFSGPANDAKG-RVAAIRVPGGAQLSRKQIDEYGKFIEIYGAKGLAYIKLN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK LN     A+  R   QDGD  FF A D  K  + A  A R  + 
Sbjct: 356 ERAKGLEGVQSPVAKFLNADMLSALLDRTAAQDGDILFFGA-DSAKVVTDALGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +   + +E  W++DFP +E  + E  +   H+PFT P+  + S    + +S  A  
Sbjct: 415 RDLSLTKDDSWEPLWVVDFPMFE-EDGEGGLAAMHHPFTAPRDMLPSELAANPVSAIANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  ++    FS +GI+++    +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHNGDMQQTVFSILGITEQEQREKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V
Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLEELAIAVV 584


>gi|289706218|ref|ZP_06502581.1| aspartate--tRNA ligase [Micrococcus luteus SK58]
 gi|289557057|gb|EFD50385.1| aspartate--tRNA ligase [Micrococcus luteus SK58]
          Length = 604

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 234/613 (38%), Positives = 335/613 (54%), Gaps = 38/613 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTHS G+L  S +G  V ++GWV R R HGG+ F+D+RD  G  QVV   D A F+    
Sbjct: 3   RTHSLGELNASLIGQTVTVTGWVARRRDHGGVAFVDLRDASGFAQVVVR-DEADFD---P 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+EWVL + G V  R     N N+ +G+IEL A+ + +L+ A  LP  V    E  E  
Sbjct: 59  LRNEWVLQVIGTVERRPEGNENPNLPSGEIELIAETVTVLNTAAALPFQVDEHVEVGEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR    + +  R+ +  + R  +  E F+E  TP LT S+PEGARDFLVP+
Sbjct: 119 RLRHRYLDLRRPQPSRIMRLRSEVNRTARELLHGEGFVEVETPTLTRSTPEGARDFLVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLL   G ++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E +++ ++     G  V     R+ Y +A+ +YG+DKPDLR  + + ++TE
Sbjct: 238 EQDDVIALGEKIVKALWALV--GVDVPTPIRRMTYAEAMEKYGSDKPDLRFGLELTDLTE 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 296 YFKDTPFRVFQNEY-------VGAVVMPGGASQARRTLDAWQEWAKQRGAKGLAYVL--I 346

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPV+K+++      +   +    GD  FF AG P +  +    AR  I + 
Sbjct: 347 QEDGEL--TGPVSKNISEEEKAGLAAAVGANPGDCVFFAAGKPKESRALLGAARVEIGRR 404

Query: 424 LGIINCNC---------FEFCWIMDFPFYEWNEEE-KKIDFA---------HNPFTMPQG 464
            G+              + F W++D P +E   +     D A         H+ FT P+ 
Sbjct: 405 CGLFTDAGDGVAAKDADWAFVWVVDAPMFEPAADAVASGDVAVGAGAWTAVHHAFTSPKP 464

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D  S  A+ YD+VCNG EI  G IR H  +V  + F  +G+S E    +FG 
Sbjct: 465 EFADTFDTDPGSALAYAYDIVCNGNEIGGGSIRIHRQDVQERVFEVMGLSPEEANEKFGF 524

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L   F+ G PPHGGIA G DR+V LL G +++REV  FP + N  D L  +P+ ++ +Q 
Sbjct: 525 LLEGFKYGAPPHGGIAFGWDRVVALLAGTESIREVIAFPKTGNGYDPLTAAPAPITAQQR 584

Query: 585 RELGLRIVENPKK 597
           +E G+     P K
Sbjct: 585 KEAGVDAQPEPTK 597


>gi|262196372|ref|YP_003267581.1| aspartyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262079719|gb|ACY15688.1| aspartyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 618

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 222/589 (37%), Positives = 341/589 (57%), Gaps = 10/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           +TH CG L   D G  V L+GWV   R HGG +F D+RD  G+TQ+V +P  D+   ++A
Sbjct: 10  KTHGCGALRADDNGKTVVLTGWVDVRRDHGGCVFADLRDRTGLTQIVFDPTVDAEAHKLA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+E+ + + G V SR  + +N  + TG IE++ ++IEI S A   P P+  + +  E
Sbjct: 70  GDLRTEYCIGVVGEVRSR-GDNVNPRMPTGAIEVACKQIEIFSRAATPPFPIEDDLDTNE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R  YR+LDLRR  L +N+  R + ++SMR  + A  F +  TP L   +P GAR+F+V
Sbjct: 129 ALRLSYRYLDLRRPVLQRNLQMRAQAVHSMRTYLAANGFSDIETPFLVKYTPGGARNFVV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYAL ++PQ YKQLLM +GF+RY+Q+  CFRDED R DR P EF Q+D+E+S
Sbjct: 189 PSRLQAGSFYALAESPQIYKQLLMVAGFERYYQVVRCFRDEDLRLDRQP-EFTQIDIELS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  +   +E ++  ++++   G  +   FLR+ +D+A+R+YG DKPDLR  + +  +
Sbjct: 248 FIDEKGLQTIIEGMIAKLWQDVL-GVELQTPFLRMSWDEAMRKYGVDKPDLRLDLELCEI 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE    S F+VF  +++     +   +P +G   +R   D +  +A+  G  G+AY+  R
Sbjct: 307 TEACASSGFQVFENVIAKGGIVKCLRVP-EGDRLSRTQLDGLTGFAKPYGVKGIAYV--R 363

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + + G  A  G   K  +     A+       DGD   F A  P    +     R HI  
Sbjct: 364 VKDGG--AWQGAPGKAFSDEARLAVNAAAGASDGDVLLFCADKPRVANTCMGAVRLHIGD 421

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+I    + F W+ D P +E  E+   +  +H+PFT P+   E    +    + A  Y
Sbjct: 422 KLGMIREGEWRFMWLTDPPLFEQPEDGGALVSSHHPFTSPRPEDEEHLESAPERVLARAY 481

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+  G IR H S++  + F  +GIS E  + +FG L  AF+ G PPHGGIA G
Sbjct: 482 DLVLNGVEVGGGSIRIHRSDLQARIFKALGISDEEAQEKFGFLLEAFKYGPPPHGGIALG 541

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR+ MLL GA+++R+V  FP +Q   DL+  +P+ V    L EL +++
Sbjct: 542 LDRLSMLLTGAESLRDVLAFPKTQKGSDLMSDAPTPVGSAHLDELYIQL 590


>gi|239917780|ref|YP_002957338.1| aspartyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281413727|ref|ZP_06245469.1| aspartyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|259511865|sp|C5CCH2|SYD_MICLC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|239838987|gb|ACS30784.1| aspartyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 604

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 234/613 (38%), Positives = 335/613 (54%), Gaps = 38/613 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTHS G+L  S +G  V ++GWV R R HGG+ F+D+RD  G  QVV   D A F+    
Sbjct: 3   RTHSLGELNASLIGQTVTVTGWVARRRDHGGVAFVDLRDASGFAQVVVR-DEADFD---P 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+EWVL + G V  R     N N+ +G+IEL A+ + +L+ A  LP  V    E  E  
Sbjct: 59  LRNEWVLQVTGTVERRPEGNENPNLPSGEIELIAETVTVLNTAAALPFQVDEHVEVGEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR    + +  R+ +  + R  +  E F+E  TP LT S+PEGARDFLVP+
Sbjct: 119 RLRHRYLDLRRPQPSRIMRLRSEVNRTARELLHGEGFVEVETPTLTRSTPEGARDFLVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLL   G ++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E +++ ++     G  V     R+ Y +A+ +YG+DKPDLR  + + ++TE
Sbjct: 238 EQDDVIALGEKIVKALWALV--GVDVPTPIRRMTYAEAMEKYGSDKPDLRFGLELTDLTE 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 296 YFKDTPFRVFQNEY-------VGAVVMPGGASQARRTLDAWQEWAKQRGAKGLAYVL--I 346

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPV+K+++      +   +    GD  FF AG P +  +    AR  I + 
Sbjct: 347 QEDGEL--TGPVSKNISEEEKAGLAAAVGANPGDCVFFAAGKPKESRALLGAARVEIGRR 404

Query: 424 LGIINCNC---------FEFCWIMDFPFYEWNEEE-KKIDFA---------HNPFTMPQG 464
            G+              + F W++D P +E   +     D A         H+ FT P+ 
Sbjct: 405 CGLFTDAGDGVAAKDADWAFVWVVDAPMFEPAADAVASGDVAVGAGAWTAVHHAFTSPKP 464

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D  S  A+ YD+VCNG EI  G IR H  +V  + F  +G+S E    +FG 
Sbjct: 465 EFADTFDADPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFEVMGLSPEEANEKFGF 524

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L   F+ G PPHGGIA G DR+V LL G  ++REV  FP +    D L G+P+ ++ +Q 
Sbjct: 525 LLEGFKYGAPPHGGIAFGWDRVVALLAGTDSIREVIAFPKTGGGFDPLTGAPAPITAQQR 584

Query: 585 RELGLRIVENPKK 597
           +E G+     PK+
Sbjct: 585 KEAGVDAQPEPKQ 597


>gi|160884601|ref|ZP_02065604.1| hypothetical protein BACOVA_02590 [Bacteroides ovatus ATCC 8483]
 gi|156110340|gb|EDO12085.1| hypothetical protein BACOVA_02590 [Bacteroides ovatus ATCC 8483]
          Length = 611

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 229/592 (38%), Positives = 341/592 (57%), Gaps = 16/592 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACF 59
           + +RTH+CG+L +SDV   V LSGWV R R  GG+ F+D+RD YGITQ+V N +  +   
Sbjct: 24  YMFRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELC 83

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +  E+V+ + G V  R ++  NANI TG IE+   ++ +L+ A   P  +    +
Sbjct: 84  ERANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMIPPFTIEDNTD 141

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + IR KYR+LDLRR+ +  N+  R ++   +R  + +  FIE  TP+L  S+PEGARD
Sbjct: 142 GGDDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARD 201

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D 
Sbjct: 202 FVVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDC 260

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVEQ+DI++T E + + +F+    G  ++  F R+ + DA++ YG+DKPDLR  +  
Sbjct: 261 EMSFVEQEDIISTFEGMAKHLFKTL-RGVELNEPFQRMSWADAMKYYGSDKPDLRFGMKF 319

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358
             + +      F VF      N  Y V  I A+G     R   D + E+ +         
Sbjct: 320 VELMDIMKGHGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTEFVKKPQIGAKGM 373

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADAR 417
           ++ R++  G V     V K       + ++     + GD    ++GD  +K      + R
Sbjct: 374 VYARVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELR 431

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     +   D  ++
Sbjct: 432 LEMGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAV 491

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H +++  + F  +G + E  E +FG L  AF+ G PPHG
Sbjct: 492 RADAYDMVINGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAEAQFGFLMNAFKYGAPPHG 551

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           G+A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L
Sbjct: 552 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQSQLDELNL 603


>gi|300113111|ref|YP_003759686.1| aspartyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299539048|gb|ADJ27365.1| aspartyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 595

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 228/594 (38%), Positives = 341/594 (57%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H CG+L    +   V L GWV+R R HGG+IF+D+RD  G+ Q+V +P+ +   F  A
Sbjct: 2   RSHYCGELSEDHLEQSVTLCGWVNRRRDHGGVIFIDLRDREGLIQLVFDPEYSPESFRHA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +RSE+VL + G V  R   T N ++ TGQ+E+  Q++ +L+ +E  P PV  + E  E
Sbjct: 62  EQIRSEYVLQVKGRVQHRPEGTENPDLKTGQVEVLGQELILLNASETPPFPVDEKLEVGE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR +YR++DLRR    + +  R+ II  +R  +    F++  TPILT S+PEGARDFLV
Sbjct: 122 DIRLRYRYIDLRRPESLQRLRLRSAIIRQLRKFLDERGFLDIDTPILTQSTPEGARDFLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + G F+ALPQ+PQ +KQLLM +G DRY+Q+  CFRDED R+DR P EF QLD+E S
Sbjct: 182 PSRTHPGQFFALPQSPQLFKQLLMVAGVDRYYQVVRCFRDEDLRADRQP-EFTQLDIEAS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ ++ ++  ME + + +F        +   F+R+ Y +A+  +G DKPDLR P+ +  V
Sbjct: 241 FLHEEALMALMEEMFKELFATVLE-TPLHTPFIRMPYAEALACFGLDKPDLRIPLRLVEV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     +F+VF++      G  V A+   GGG  +R   +   ++    G  GLAYI  
Sbjct: 300 GDLMKTVDFKVFAQPAQNRDG-RVAALRLPGGGKLSRKEIEDYTQFVAIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+ K L      A+  R+  ++GD  FF A             R  + 
Sbjct: 359 IERSRGREGLQSPILKFLPDEVIGAMLERIGAENGDIVFFGADKASIVNESLGALRVKLG 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            + G++  + +   WI+DFP +EWNE++ +    H+PFT P+    SL   +  + ++  
Sbjct: 419 HDHGLVE-HGWSPLWIIDFPMFEWNEDDDRWHALHHPFTAPKEEDLSLLEQNPGACRSRA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR   ++V  Q F  +GI  E  +++FG L  A + G PPHGGIA 
Sbjct: 478 YDLVLNGTEVGGGSIRISQAQVQSQVFRLLGIGDEEAQDKFGFLLDALKYGCPPHGGIAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR+VML+ G+ ++REV  FP +Q     L G+P  V+  QLRELG+ +   P
Sbjct: 538 GLDRLVMLMTGSASIREVIPFPKTQTAACPLTGAPGQVAEAQLRELGIGVRRPP 591


>gi|258621668|ref|ZP_05716699.1| aspartyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258585899|gb|EEW10617.1| aspartyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 591

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 345/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD A  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N ++ TG++EL A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKDMATGEVELLARGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G V    PVAK L     +AI  R   Q GD   F   D  K  + A  A R    
Sbjct: 356 DLAAGMVGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +ELGI N + +   W++DFP +E  ++E  +   H+PFT P     E LK N   ++ + 
Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-GDDEGNVAAMHHPFTSPLNLTPEQLKANPEEAL-SN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRIKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +
Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583


>gi|329920161|ref|ZP_08276992.1| aspartate--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|328936615|gb|EGG33059.1| aspartate--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 612

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 224/593 (37%), Positives = 348/593 (58%), Gaps = 17/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG++        V + GWV RVR  G +IF+D+RD  GI QVV N DS  A  ++A
Sbjct: 4   RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +E+V+ + G V+ RS   +N  I TG++E++A  I +L+ ++  P  +  +    E
Sbjct: 64  QKLGNEYVVEVQGKVVRRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR +L  +I+ R++I++++      E F+   TP L  S+PEGARD+LV
Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S
Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  +    E +L+ V ++   G  +     RI +D+A+ +YG+DKPD+R  + +H++
Sbjct: 241 FLDEKGVQTYTEGLLKKVMKDVM-GIDIVTPIKRITWDEAMNKYGSDKPDIRYDMHLHDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E F  SEF+VF+  LS N G  +  I  K G    +R   +   E+ +     G+A++ 
Sbjct: 300 SEIFKDSEFKVFADTLS-NGGV-IKGIAVKDGAEAYSRKKIEEKQEYIKRYHAKGIAWVK 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E+G     GP+A+ L       +    ++  G+    IA D  K  + + D  R  
Sbjct: 358 Y---ENGEFT--GPIARFLTENQKRDLISEFELTGGELITIIA-DIWKVVTDSLDYLRRT 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GII  + F+F W++D+P +E++E +++   AH+PFTMP      L   +     A
Sbjct: 412 FAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE    +FG L  A   G PPH G+
Sbjct: 472 RSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFLLEALDMGFPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR  MLL    N+R+V  FP + +  + +M SP+ V+ +QL +LG+ ++
Sbjct: 532 AIGLDRFAMLLAEKDNIRDVIAFPKNASASEPMMHSPAPVADKQLADLGISVM 584


>gi|325281473|ref|YP_004254015.1| aspartyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324313282|gb|ADY33835.1| aspartyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 581

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/601 (39%), Positives = 350/601 (58%), Gaps = 36/601 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH+CG L + +V   V LSGWV ++R  G + F+D+RD YGITQ+VA  +SA  EI K
Sbjct: 2   YRTHTCGALRIENVNENVCLSGWVQKIRNLGAMTFIDLRDRYGITQLVAE-ESASEEIKK 60

Query: 64  SVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            V     E+V+ I G V+ R+++  N  I TG+IE+    ++ILS +E  P  +    + 
Sbjct: 61  QVAQLGREFVIQIQGKVVERASK--NNKIPTGEIEIILDTVKILSRSEIPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  + +N+  R R+ + +R  +  + F+E  TP+L  S+PEGARDF
Sbjct: 119 GDEIRMKYRYLDLRRQMVRRNLELRHRMAHLVRNFLDGKQFMEVETPVLIKSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+NQG FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNQGQFYALPQSPQTFKQLLMVAGFDRYYQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVE++D+L   E+++R +F+E    +  +  F R+ + +A+ +YG DKPD+R  +   
Sbjct: 238 MSFVEREDVLGIFEDMIRHLFKEIRGIDIPA--FPRMTWHEAMEQYGCDKPDIRFGMKFA 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357
           ++T      +F VF      N    +  I   G     R   D + ++ +    G  GL 
Sbjct: 296 DLTRLARTKDFAVF------NSAEYIGGICVPGCASYTRKQLDELTDFVKRPQVGAKGLV 349

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM---QDGDSCFFIAGDPLKFCSFAA 414
           Y+  + +E G++     V K       E ++V LD    Q GD    + G   K      
Sbjct: 350 YV--KYNEDGSIK--SSVDK---FYTAEELKVWLDTCQAQPGDLLLILCGAKNKTLPQLC 402

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESLK 470
           + R  +   LG+ + N F+  WI+DFP  EW+EE ++    H+PFT P       ME+  
Sbjct: 403 ELRLEMGNRLGLRDKNVFKPLWIVDFPLLEWDEETQRFYAMHHPFTSPNPEDIDLMETRP 462

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           G+    ++A  YD+V NG E+  G IR H + +  + F  +G + E  E +FG L  AF+
Sbjct: 463 GD----VRANAYDMVINGVEVGGGSIRIHDTALQQRMFKCLGFTPEQAEKQFGFLLNAFK 518

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DR+V +  G  ++R+   FP + +  D+++ SPS +SVEQ +ELG++
Sbjct: 519 YGAPPHGGIAFGFDRLVSMFAGLDSIRDTIAFPKNNSGRDVMIDSPSEISVEQFKELGIK 578

Query: 591 I 591
           +
Sbjct: 579 L 579


>gi|188533627|ref|YP_001907424.1| aspartyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238691995|sp|B2VJ90|SYD_ERWT9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|188028669|emb|CAO96531.1| Aspartyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 595

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 234/596 (39%), Positives = 348/596 (58%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG + +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F +A 
Sbjct: 2   RTEYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQEAFTLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N ++ TG+IE+ A ++ I++ +E  PLP+       E 
Sbjct: 62  ELRNEFCIQIVGTVRARDEKNKNGDMATGEIEIFATELTIINRSE--PLPLDSNHINSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M  + F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPDMANRLKTRAKITSFVRRFMDDQGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++++  + +  +  F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMERLVRELWQDVKSVDLGA--FPSMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + EF+VFS   +   G  V A+   GG   +R   D   ++  + G  GLAYI   
Sbjct: 297 DLLKNVEFKVFSGPANDVKG-RVAALRVPGGAALSRKQIDDYAKFIETYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK LN    E+I  R    DGD  FF A D  K  + A  A R  + 
Sbjct: 356 ERAKGIEGITSPVAKFLNAEIVESILQRTAAADGDLIFFGA-DSAKVVADALGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++L I N + +   W++DFP +E ++ E  +   H+PFT P+    E LK     +I A 
Sbjct: 415 RDLNITNGSVWAPLWVLDFPMFE-DDGEDGLTAMHHPFTAPKEMSPEQLKNAPETAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  ++    F  +GI+++    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHNGQMQQTVFGILGITEQEQREKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VMLL G  N+R+V  FP +     L+  +P+  +   L ELG+ +V+  K
Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPNFANPASLTELGIEVVKKAK 588


>gi|259500578|ref|ZP_05743480.1| aspartate-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302191269|ref|ZP_07267523.1| aspartyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309806585|ref|ZP_07700582.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|259167962|gb|EEW52457.1| aspartate-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|308167005|gb|EFO69187.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 612

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 223/593 (37%), Positives = 348/593 (58%), Gaps = 17/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG++        V + GWV RVR  G +IF+D+RD  GI QVV N DS  A  ++A
Sbjct: 4   RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +E+V+ + G V+ RS   +N  I TG++E++A  I +L+ ++  P  +  +    E
Sbjct: 64  QKLGNEYVVEVQGKVVKRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR +L  +I+ R++I++++      E F+   TP L  S+PEGARD+LV
Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S
Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  +    E +L+ V ++   G  +     RI +D+A+ +YG+DKPD+R  + +H++
Sbjct: 241 FLDEKGVQTYTEGLLKKVMKDVM-GIDIVTPIKRITWDEAMNKYGSDKPDIRYDMHLHDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++ F  SEF+VF+  LS N G  +  I  KGG    +R   +   E+ +     G+A++ 
Sbjct: 300 SDIFKDSEFKVFADTLS-NGGV-IKGIAVKGGAEAYSRKKIEEKQEYIKRYHAKGIAWVK 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E+G     GP+ + L       +    ++  G+    IA D  K  + + D  R  
Sbjct: 358 Y---ENGEFT--GPIVRFLTENQKRDLISEFELTGGELITIIA-DIWKVVTDSLDYLRRT 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GII  + F+F W++D+P +E++E +++   AH+PFTMP      L   +     A
Sbjct: 412 FAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE    +FG L  A   G PPH G+
Sbjct: 472 RSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFLLEALDMGFPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR  MLL    N+R+V  FP + +  + +M SP+ V+ +QL +LG+ ++
Sbjct: 532 AIGLDRFAMLLAEKDNIRDVIAFPKNASASEPMMHSPAPVADKQLADLGINVM 584


>gi|227329757|ref|ZP_03833781.1| aspartyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 598

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/591 (39%), Positives = 345/591 (58%), Gaps = 11/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F++A 
Sbjct: 2   RTNYCGQLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    IN ++ TG++E+ A  + I++ +E LPL     +   E 
Sbjct: 62  ELRNEFCIQLTGVVRARPESQINKDMATGEVEIFANALTIVNRSEALPLD--SNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLRR  + + +  R RI + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKFRYLDLRRPEMAQRLKTRARITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++++    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLVRELWQDVKGVDL--GDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + EF+VFS   +   G  V AI   GG   +R   D   ++    G  GLAYI   
Sbjct: 297 DLVKNIEFKVFSGPANDAKG-RVAAIRVPGGAQLSRKQIDEYGKFIEIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK L+     A+  R   QDGD  FF A D  K  + A  A R  + 
Sbjct: 356 ERVRGLEGVQSPVAKFLSEDVLSAVLDRTAAQDGDILFFGA-DSAKVVTDALGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +   N +E  W++DFP +E  + E  +   H+PFT P+  + S    + +S  A  
Sbjct: 415 RDLSLTKDNSWEPLWVVDFPMFE-EDGEGGLAAMHHPFTAPRDMLPSELAANPVSAIANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+    FS +GI+++    +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHSGEMQQTVFSILGITEQEQREKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V
Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLEELAIAVV 584


>gi|315653586|ref|ZP_07906506.1| aspartate--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|315488948|gb|EFU78590.1| aspartate--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 612

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 224/593 (37%), Positives = 348/593 (58%), Gaps = 17/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG++        V + GWV RVR  G +IF+D+RD  GI QVV N DS  A  ++A
Sbjct: 4   RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +E+V+ + G V+ RS   +N  I TG++E++A  I +L+ ++  P  +  +    E
Sbjct: 64  QKLGNEYVVEVQGKVVRRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR +L  +I+ R++I++++      E F+   TP L  S+PEGARD+LV
Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S
Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  +    E +L+ V ++   G  +     RI +D+A+ +YG+DKPD+R  + +H++
Sbjct: 241 FLDEKGVQTYTEGLLKKVMKDVM-GIDIVTPIKRITWDEAMNKYGSDKPDIRYDMHLHDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E F  SEF+VF+  LS N G  +  I  K G    +R   +   E+ +     G+A++ 
Sbjct: 300 SEIFKDSEFKVFADTLS-NGGV-IKGIAVKDGAEAYSRKKIEEKQEYIKRYHAKGIAWVK 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E+G     GP+A+ L       +    ++  G+    IA D  K  + + D  R  
Sbjct: 358 Y---ENGEFT--GPIARFLTENQKRDLISEFELTGGELITIIA-DIWKVVTDSLDYLRRT 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GII  + F+F W++D+P +E++E +++   AH+PFTMP      L   +     A
Sbjct: 412 FAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE    +FG L  A   G PPH G+
Sbjct: 472 RSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFLLEALDMGFPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR  MLL    N+R+V  FP + +  + +M SP+ V+ +QL +LG+ ++
Sbjct: 532 AIGLDRFAMLLAEKDNIRDVIAFPKNASASEPMMHSPAPVADKQLADLGINVM 584


>gi|313837757|gb|EFS75471.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314927362|gb|EFS91193.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314972694|gb|EFT16791.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
 gi|328907447|gb|EGG27213.1| aspartate--tRNA ligase [Propionibacterium sp. P08]
          Length = 606

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/603 (39%), Positives = 336/603 (55%), Gaps = 25/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKVVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + GLV +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIKLTGLVEARPEGNANPNLPTGEIEVAISELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+++ +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPRQHEALVLRSQVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++    G  +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPIPRITWHEAMDRYGSDKPDLRFSNEIIEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF       P      +P       R F D   EWAR+ G  GLAYI   + 
Sbjct: 300 FFANTPFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTHGAKGLAYI--TVS 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G V G GPVAK+++      I   +  + GD+ FF AG           AR  I +  
Sbjct: 352 DEG-VPG-GPVAKNISDEEKAGIAEVVGAKPGDAIFFAAGPKTSSQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474
            + N   + FCW++D P ++  +E E   D A         H+ FT P          D 
Sbjct: 410 ELFNPADWAFCWVVDAPLFKPTKEAEASGDVAVGAGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A  YD V NG E+  G IR H  ++  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAHAYDFVVNGNEVGGGSIRIHRRDIQERVFNVMGIGPEEAQKKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ +S  Q RE G  +   
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPISPAQRREAG--VDAR 587

Query: 595 PKK 597
           PKK
Sbjct: 588 PKK 590


>gi|126440880|ref|YP_001057727.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|166225330|sp|A3N5V6|SYD_BURP6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|126220373|gb|ABN83879.1| aspartate--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 600

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 234/601 (38%), Positives = 337/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDATFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   QDGD  FF A D  K  + +  A       
Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++EE +   AH+PFT P+         D    
Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+   E P
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598

Query: 596 K 596
           K
Sbjct: 599 K 599


>gi|227505013|ref|ZP_03935062.1| aspartyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227198377|gb|EEI78425.1| aspartyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 596

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 236/595 (39%), Positives = 332/595 (55%), Gaps = 29/595 (4%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+L     G  V L+GWV R R HGG+IF+D+RD  GI QVV   +S   E A  +RSE
Sbjct: 2   AGELRKDIAGETVTLTGWVSRRRDHGGVIFIDLRDRSGIAQVVFR-ESDVAERAHDLRSE 60

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYPESIR 125
           + + + G+V  R   + N N+ +G+IE++  ++E+L+ +  LP  +       E  E  R
Sbjct: 61  YCVKVTGVVEPRPEGSENPNLPSGEIEVNVSELEVLNKSAALPFQIDDPSTSGEVGEETR 120

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            KYR+LDLRR T    +  R+    + R  +   +F E  TP LT S+PEGARDFLVP+R
Sbjct: 121 LKYRYLDLRRKTQGDALRLRSEANRAAREVLARHDFTEIETPTLTRSTPEGARDFLVPAR 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           +  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV+
Sbjct: 181 LKPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFVD 239

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           QDD++   E ++  +++    G  ++    R+ Y DA++ YG+DKPDLR  I +   T+ 
Sbjct: 240 QDDVIALAEEIVSALWKLI--GYEITTPIPRMTYADAMKYYGSDKPDLRFGIKIVECTDF 297

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRLD 364
           F  + FRVF           V A+  +GG    R   D   EWA+ +G  GLAYI   + 
Sbjct: 298 FKDTTFRVFQNEY-------VGAVVMEGGASQPRRQFDAWQEWAKQRGAKGLAYI--TIA 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G++   GPVAK++     E I   +  Q GD+ FF AGD     +    AR  IA++L
Sbjct: 349 EDGSLG--GPVAKNITDAEREGIAAHVGAQPGDAIFFAAGDTKSSRALLGAARGEIARKL 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEK---KIDFAHNPFTMPQGGMESLKGNDLLSIK--- 478
            +I    + F W++D P +E   +      +   H+ +T       S K   L S     
Sbjct: 407 DLIKDGDWAFTWVVDAPLFEPAADATASGDVALGHSKWTAVHHAFTSPKPEYLDSFDKEP 466

Query: 479 ----AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               A+ YD+VCNG EI  G IR H  +V  + F  +GI +E  + +FG L  AFQ G P
Sbjct: 467 GEALAYAYDIVCNGNEIGGGSIRIHQQDVQKRVFDVMGIGEEEAQEKFGFLLDAFQYGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PHGGIA G DRIV LL G  ++R+V  FP S    D L  +P  +   Q +E G+
Sbjct: 527 PHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPGPIPAAQRKETGV 581


>gi|226329879|ref|ZP_03805397.1| hypothetical protein PROPEN_03792 [Proteus penneri ATCC 35198]
 gi|225200674|gb|EEG83028.1| hypothetical protein PROPEN_03792 [Proteus penneri ATCC 35198]
          Length = 594

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 220/592 (37%), Positives = 333/592 (56%), Gaps = 8/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L  + VG  V L GWV+R R  GG+IF+D+RD  GI QV  +P+    F  A 
Sbjct: 2   RTNYCGQLNSAHVGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPEQKEAFSQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R    +N N+ TG+IEL+A+ + I + +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQVTGTVRARPDSQVNKNMATGEIELAAESLSIFNRSE--PLPLDSNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  YR+LDLRR  +   +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 RRLTYRYLDLRRPEMSDRLKTRAKITSFVRRFMDGEGFLDVETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++  ++ +  N +     F  + + +A+RRYG+DKPDLRNP+ + ++ 
Sbjct: 239 MSADQVREVMERMIHALWLDILNVDL--GAFPVMTFAEAMRRYGSDKPDLRNPMELKDIA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF++  + +    V A+   GG    R   D   ++    G  GLA++   
Sbjct: 297 DLVKDVEFSVFAQAAN-DEKCRVIALRVPGGASLTRKNIDEYTQFVSIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+AK L      AI       DGD  FF AG            R  + +
Sbjct: 356 ESAKGIEGVQSPIAKFLTNDVVNAILETTGATDGDLIFFGAGRKGTMSDAMGALRLKVGR 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + + N ++  W++DFP +E +EE   +   H+PFT P+    +      +   A  Y
Sbjct: 416 DLELTDLNAWKPLWVIDFPMFEEDEETGSLSAMHHPFTSPKDLSPAELTAHPVGAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H +E+    F  +GI+    + +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIHRNEMQQAVFGILGITPNEQQEKFGFLLEALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+VMLL G  N+R+V  FP +     L+  +PS  + + L+EL + + + 
Sbjct: 536 LDRLVMLLTGTDNIRDVIAFPKTTAAACLMTNAPSFANEDALKELAIAVTQK 587


>gi|311064068|ref|YP_003970793.1| aspartyl-tRNA synthetase AspS [Bifidobacterium bifidum PRL2010]
 gi|310866387|gb|ADP35756.1| AspS Aspartyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 598

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/605 (38%), Positives = 343/605 (56%), Gaps = 39/605 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V L+GWV R R HGG+ F+D+RD+ G+ Q+V   +    E+A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDNTGLVQIVIYDE----EMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117
            +RSE+V+ + G V  R     N ++ TG+IE+  + I++L+ ++ LP  V        E
Sbjct: 62  PLRSEFVIQVTGEVRLRPDGNENTHLATGKIEVVVETIDVLAKSDALPFQVSTALENESE 121

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEEMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294
           LDMEM+FV+Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYDVQLPIQRITWQDAMDKYGSDKPDLRFG 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353
           NP++   +TE+F  + FRVF           V A+  KGG    R   D   EWA+ +G 
Sbjct: 299 NPLV--ELTEYFKDTPFRVFQADY-------VGAVVFKGGAATPRRQFDAWQEWAKQRGA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAY+     E G +   GPVAK+L+    E +   +  + GD+ FF AG         
Sbjct: 350 KGLAYV--SFTEDGELK--GPVAKNLSDSEREGLMAAVGAESGDAVFFAAGSRESSQLLL 405

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464
              R  +A+  G+++   F F W++DFP ++  ++    D A         H+PFTMP  
Sbjct: 406 GAVRVELARRAGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D     +  YD+VCNG E+  G +R H  ++  +  + +GI+ E  + +FG 
Sbjct: 466 DWIDKFDQDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQDRVLNVLGIAPEEAKEKFGF 525

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPH GIA G DR V +L GA  +R+V  FP +    D L G+P+ +S EQ 
Sbjct: 526 LLDAFKFGAPPHAGIALGWDRTVSILAGADTIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585

Query: 585 RELGL 589
            E G+
Sbjct: 586 AETGV 590


>gi|117928541|ref|YP_873092.1| aspartyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|166225311|sp|A0LUJ6|SYD_ACIC1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|117649004|gb|ABK53106.1| aspartyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 592

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/590 (39%), Positives = 333/590 (56%), Gaps = 22/590 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  +D GS V L+GWV R R  GG++FLD+RD  GI QVVA  +    ++A  
Sbjct: 3   RTHEAGTLRPADAGSRVVLAGWVARRRDLGGVVFLDLRDASGIVQVVAR-EGVAGQVASR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E+ L + G V  R A   N  + TG +E+ A +IE+LS A  LP PV G  E  E  
Sbjct: 62  VRAEFCLRVAGEVRLRPAGNENPELETGDVEVVADEIEVLSEAAPLPFPVTGPVEVNEET 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR    + +  R+ +    R  M    F+E  TP LT S+PEGARDFLVP+
Sbjct: 122 RLKYRYLDLRRPGPARALRLRSEMNRLAREVMARHRFVEVETPYLTRSTPEGARDFLVPA 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM +G +RY+Q+A CFRDED R+DR P EF QLD+EMSFV
Sbjct: 182 RLQPGHWYALPQSPQLFKQLLMVAGLERYYQLARCFRDEDFRADRQP-EFTQLDIEMSFV 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +DD++   E+V+  ++ + + G  ++    R+ Y +A+RR+G+DKPDLR    + ++T+
Sbjct: 241 TEDDVMALAEDVIATLWSQLA-GVELALPLPRLTYAEAMRRFGSDKPDLRFGQEIVDLTK 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  +  R+F           V A+   GG G +R+  D    +ARS+G  GLAY+    
Sbjct: 300 FFAGTSLRIFQAPY-------VGAVVMPGGAGQSRSELDEWTTFARSRGAKGLAYVLVGA 352

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           + +      GP+AK+L+      +      + GD+ FF AG+           R  IA+ 
Sbjct: 353 ELT------GPIAKNLSDAERAGLPAATGARPGDAIFFAAGEQRASQELLGAVRLEIARR 406

Query: 424 LGIIN----CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
             + +       +  CWI+D P +E  +        H+PFT P+        +      A
Sbjct: 407 CRLTDPASGAPAWSLCWIVDPPLFE-PDGAGGWTSVHHPFTAPKPEWMDRFADKPGEALA 465

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G IR H ++V  + F  +GIS+     +FG L  AF+ G PPHGGI
Sbjct: 466 AAYDIVANGNEIGGGSIRIHRADVQQRVFEVLGISEAEANAKFGFLLEAFRYGPPPHGGI 525

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G DRI  LL G +++R+V  FP + +  D L G+P+ ++ EQ +E G+
Sbjct: 526 AFGWDRIAALLAGVESIRDVIAFPKTASGTDPLTGAPTPITPEQRKEAGI 575


>gi|312874150|ref|ZP_07734184.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311090220|gb|EFQ48630.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
          Length = 612

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 224/593 (37%), Positives = 348/593 (58%), Gaps = 17/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG++        V + GWV RVR  G +IF+D+RD  GI QVV N DS  A  ++A
Sbjct: 4   RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +E+V+ + G V+ RS   +N  I TG++E++A  I +L+ ++  P  +  +    E
Sbjct: 64  QKLGNEYVVEVQGKVVRRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR +L  +I+ R++I++++      E F+   TP L  S+PEGARD+LV
Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S
Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  +    E +L+ V ++   G  +     RI +D+A+ +YG+DKPD+R  + +H++
Sbjct: 241 FLDEKGVQTYTEGLLKKVMKDVM-GIDIVTPIKRITWDEAMNKYGSDKPDIRYDMHLHDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E F  SEF+VF+  LS N G  +  I  K G    +R   +   E+ +     G+A++ 
Sbjct: 300 SEIFKDSEFKVFADTLS-NGGV-IKGIAVKDGAEAYSRKKIEEKQEYIKRYHAKGIAWVK 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E+G     GP+A+ L       +    ++  G+    IA D  K  + + D  R  
Sbjct: 358 Y---ENGEFT--GPIARFLTENQKRDLISEFELTGGELITIIA-DIWKVVTDSLDYLRRT 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GII  + F+F W++D+P +E++E +++   AH+PFTMP      L   +     A
Sbjct: 412 FAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G IR H  E+  + F  +G +KE    +FG L  A   G PPH G+
Sbjct: 472 RSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFLLEALDMGFPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR  MLL    N+R+V  FP + +  + +M SP+ V+ +QL +LG+ ++
Sbjct: 532 AIGLDRFAMLLAEKDNIRDVIAFPKNASASEPMMHSPAPVADKQLDDLGINVM 584


>gi|206559273|ref|YP_002230034.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|238693095|sp|B4EBD1|SYD_BURCJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|198035311|emb|CAR51186.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 600

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/601 (38%), Positives = 339/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + I GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQIKGLVRNRPEGTVNAGLKSGKIEVLCHELNVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVQLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGGELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   +DGD  FF A D  K  + +  A       
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++E+ +   AH+PFT P+         D    
Sbjct: 420 SEFGKANGLVQAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+   E P
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQP 598

Query: 596 K 596
           K
Sbjct: 599 K 599


>gi|312172686|emb|CBX80942.1| Aspartyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 595

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 236/598 (39%), Positives = 342/598 (57%), Gaps = 11/598 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG + +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F +A 
Sbjct: 2   RTEYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQEAFTLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N+ + TG+IE+ A ++ I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIRIVGTVRARDEKNKNSEMATGEIEVFATELTIINRSE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPDMANRLKARAKITSFVRRFMDDEGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +  + +     F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMERLVRNLWLDVKSVDL--GAFPIMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V A+   GG   +R   D    +    G  GLAYI   
Sbjct: 297 DLLKDIEFKVFSGPANDAKG-RVAALRVPGGAALSRKQIDDYTRFIEIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK LN    EAI  R    DGD  FF A D  K  + A  A R  + 
Sbjct: 356 QRAGGLEGITSPVAKFLNAGIVEAILQRTAAADGDLIFFGA-DRAKVVADALGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L I N + +   W++DFP +E ++ E+ +   H+PFT P+        N   S  A  
Sbjct: 415 RDLKITNGSAWAPLWVVDFPMFE-DDGEQGLTAMHHPFTAPKDMSPEQLKNAPESAIANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  ++    F  +GIS+     +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHNGQMQQTVFGILGISEHEQREKFGFLLDALKFGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           G+DR+VMLL G  N+R+V  FP +     L+  +P+  +   L ELG+ +V+  K  L
Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPNFANPASLTELGIEVVKKSKDQL 591


>gi|261210674|ref|ZP_05924966.1| aspartyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260840159|gb|EEX66739.1| aspartyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 591

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD A  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N ++ TG++EL A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKDMATGEVELLARGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    NF  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GNFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DLLKEVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTTFVAIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK L     +AI  R   Q GD   F   D  K  + A  A R    
Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +ELGI N + +   W++DFP +E  ++E  +   H+PFT P     E LK N   ++ + 
Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-GDDEGNVAAMHHPFTSPLNLTPEQLKANPEEAL-SN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +
Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583


>gi|260220363|emb|CBA27828.1| Aspartyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 602

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/600 (39%), Positives = 349/600 (58%), Gaps = 21/600 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD A  F++A+
Sbjct: 2   RSHYCGLVTEALLGQTVTLCGWVNRRRDHGGVIFVDVRDREGYVQVVCDPDRAEMFKVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I GLV +R   T N ++ +G+IE+   ++ +L+ +   P  +  E    E+
Sbjct: 62  DIRNEYCVQIKGLVRARPEGTTNDSLKSGKIEVLCHELIVLNESVTPPFQL-DEDNLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N++ R R+   +R  + A  F++  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPYMQNNLMLRYRVAMEVRKFLDANGFVDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS---NNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           + ++DI +  + ++  VF+     NT+      F  + Y DA R YG+DKPDLR  +   
Sbjct: 240 LTEEDIRDMFQGMITTVFK-----NTIGVDLGEFPVMTYQDAARLYGSDKPDLRVNLEFA 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEV-WAIP---AKGGGGNRAFCDRMNEWARSQGQPGL 356
            +T+     +F+VFS   ++  G  V   IP   A+ GG +R   D   E+ +  G  GL
Sbjct: 295 ELTDVMKDVDFKVFSGAATMKGGRVVALRIPGGSAENGGISRGEIDAYTEFVKIYGAKGL 354

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AYI       G      P+ K+++     A+  R   Q+GD  FF A D  K  + A  A
Sbjct: 355 AYIRVNDLSKGRDGLQSPIVKNIHDAALNAVLERTGAQNGDLIFFGA-DKEKIVNDAIGA 413

Query: 417 -RNHIAQ-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            R  I   E G  N      ++  W++DFP +E++EE ++    H+PFT P+ G E    
Sbjct: 414 LRIKIGHSEFGKKNGLFTGGWKPLWVVDFPMFEYDEESQRYTAVHHPFTAPKEGHEDWMV 473

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
                  +  YD+V NG+E+  G +R H ++V  + F  + I+ E  + +FG L  A Q 
Sbjct: 474 TAPEKCISQGYDMVLNGWEMGGGSVRIHRADVQQKVFDALKITPEEAQLKFGFLLDALQY 533

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G+DRIV L+ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+
Sbjct: 534 GAPPHGGLAFGLDRIVTLMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRL 593


>gi|295675469|ref|YP_003603993.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295435312|gb|ADG14482.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 599

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 234/593 (39%), Positives = 340/593 (57%), Gaps = 10/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F+IA+
Sbjct: 4   RSEYCGLVTEELLGQSVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRADMFKIAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + G+V  R   T NA++ +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQVKGVVRGRPEGTTNASLKSGKIEVLCHELIVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+  + G  +   F  + Y +A+RR+G+DKPDLR  +    +T
Sbjct: 242 LSEQEIRDLFEAMIRHVFKT-TIGVQLDEKFPVMEYAEAMRRFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMRDVDFKVFSTPANTKDGRVAALRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422
              G      P+ K+L+    +AI  R   QDGD  FF A D  K  + +  A R  I  
Sbjct: 361 AAKGRDGLQSPIVKNLHDDALKAIIERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            E G  N    + ++  W++DFP +E++EE+ +   AH+PFT P+         D     
Sbjct: 420 SEFGKANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCL 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV  + F  + I+ E  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWEIGGGSVRIYREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSEVDERQLRELHIRL 592


>gi|313820478|gb|EFS58192.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313822716|gb|EFS60430.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
          Length = 609

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 234/603 (38%), Positives = 337/603 (55%), Gaps = 25/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++    G  +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF       P      +P       R F D   EWAR++G  GLAYI   + 
Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G     GPVAK+++      I  ++  + GD+ FF AG           AR  I +  
Sbjct: 352 DEG--VPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P ++  +E E   D A         H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G  +   
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587

Query: 595 PKK 597
           PKK
Sbjct: 588 PKK 590


>gi|197284982|ref|YP_002150854.1| aspartyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|238693144|sp|B4ETP3|SYD_PROMH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|194682469|emb|CAR42399.1| aspartyl-tRNA synthetase [Proteus mirabilis HI4320]
          Length = 594

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 219/592 (36%), Positives = 338/592 (57%), Gaps = 8/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L  + VG  V L GWV+R R  GG+IF+D+RD  GI QV  +P+    F  A 
Sbjct: 2   RTNYCGQLNSAHVGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPEQKEAFSQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R    +N N+ TG+IEL+A+ + I + +E LPL     +   E 
Sbjct: 62  ELRNEFCIQVTGTVRARPDSQVNKNMATGEIELAAESLSIFNRSEALPLD--SNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  YR+LDLRR  + + +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 RRLTYRYLDLRRPEMSQRLKTRAKITSFVRRFMDGEGFLDVETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++  ++ +  N +  +  F  + + +A+RRYG+DKPDLRNP+ + ++ 
Sbjct: 239 MTAEQVREVMERMIHALWLDILNVDLGA--FPVMTFAEAMRRYGSDKPDLRNPMELIDIA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + EF VF++  + +    V A+   GG    R   D   ++    G  GLA++   
Sbjct: 297 DLVKNVEFSVFAQAAN-DEKCRVIALRVPGGASLTRKNIDEYTQFVSIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+AK L      +I    +  DGD  FF AG            R  + +
Sbjct: 356 EKAKGIEGVQSPIAKFLTNDVVNSILAATNATDGDLIFFGAGRQGTMSDAMGALRLKVGR 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + + N ++  W++DFP +E +E+   +   H+PFT P+    +      +   A  Y
Sbjct: 416 DLELTDLNAWKPLWVIDFPMFEEDEDTGSLSAMHHPFTSPKDLTPAELTAHPVGAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H +E+    FS +GI+ +    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIHRNEMQQAVFSILGITPDEQREKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+VMLL G  N+R+V  FP +     L+  +PS  + + L+EL +++ E 
Sbjct: 536 LDRLVMLLTGTDNIRDVIAFPKTTAAACLMTNAPSFANEDALKELAIQVTEK 587


>gi|312977239|ref|ZP_07788987.1| aspartate--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|310895670|gb|EFQ44736.1| aspartate--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 617

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 228/603 (37%), Positives = 351/603 (58%), Gaps = 17/603 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +G  V L GWV RVR  G ++F+D+RD  G+ Q+V N DS     +IA
Sbjct: 7   RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKKLMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E+V+ + G V+ RS   +N ++ TGQ+E+ A +I IL+ A+  P  +    E  E
Sbjct: 67  DSLGNEYVVQVKGKVVKRS--EVNPDMKTGQVEVDATEIIILNKAKNPPFEIKDGIEVSE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +++ I +  E +L+ + ++   G  +     RI + D++ +YG DKPD R  +++H++
Sbjct: 244 FADEETIQSYTEGLLKKIMKDV-KGIDLKTPIKRITWTDSMNKYGCDKPDTRYGMLIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +  F  S+F+VFS   ++  G  V  I  K G    +R   D+  ++ +     GLA++ 
Sbjct: 303 SPIFKDSDFKVFSG--AIADGGFVKGIAVKNGAKEYSRKKIDKKADFIKRFHAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E G  +  GPVA+ L   N EA++   D++ G+   F+  D  K C  + D  R  
Sbjct: 361 F---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFVT-DKWKVCCDSLDHLRRE 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GI+    ++F W++D+P +E++E   +   AH+PFTMP      L   +     A
Sbjct: 415 FAKETGIVPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHKAHA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H   +    F  +G +K+    +FG L  A   G PPH G+
Sbjct: 475 RSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           A G+DR  M+L    N+R+VS FP + +  + +M +P+ V+ +QL +LG+ + E  +  +
Sbjct: 535 AIGLDRFAMMLADKDNIRDVSAFPKNASASEPMMHAPAPVADQQLADLGIEVEEKYQDSV 594

Query: 600 KIS 602
           K +
Sbjct: 595 KAT 597


>gi|253578280|ref|ZP_04855552.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850598|gb|EES78556.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 598

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 228/581 (39%), Positives = 337/581 (58%), Gaps = 13/581 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60
           +RT  C ++    +G  V L GWV + R  GGIIF+D+RD  GI Q++    + D   F 
Sbjct: 9   HRTCRCAEVTKEMIGKEVVLMGWVQKARDKGGIIFVDLRDRSGIMQLIFENGSIDEEGFA 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ + G+V  R    +N N+ TG+IEL  + + +LS AE  P P+    + 
Sbjct: 69  KAGKLRSEFVIAVTGVVEERGG-AVNKNLATGEIELRVKSLRVLSEAEVPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  L KNI+ +++++   R     E F+E  TP+L  S+PEGARD+
Sbjct: 128 KDEIRLKYRYLDLRRPDLQKNIMLKSKVMMITRQFFAKEGFLEIETPMLGKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FY LPQ+PQ YKQLLM SG+DRY QIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGHFYGLPQSPQLYKQLLMCSGYDRYIQIARCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E  L  +F+E  + + V     RI + +A+ R+G+DKPD+R  + +H
Sbjct: 247 LSFVDVDDVIDVNERFLAYLFKEVLDID-VKLPIQRITWQEAMDRFGSDKPDMRFGMELH 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           +V++   +  F VF+  L    G  V  I A+G G   R   D++ E+A+  G  GLAYI
Sbjct: 306 DVSDVVKNCGFSVFTSAL--ENGGSVRGINAEGQGAMPRKKIDKLVEFAKGYGAKGLAYI 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
               D +   +     AK +     +A+   +D + GD   F A             R  
Sbjct: 364 AIAEDGTRKSS----FAKFMTDEEMDALVAAMDGKAGDLLLFAADKKKLVYDVLGALRLE 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+++ +++ N + F W+ +FP  EW+EEE +    H+PFTM       L   D   ++A
Sbjct: 420 LAKQMDLLDKNEYRFVWVTEFPLLEWSEEENRFTAMHHPFTMLMEEDLPLLDTDPGKVRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G +R H  ++  + F  +G +KE    +FG L  AF+ G+PPH G+
Sbjct: 480 KAYDIVLNGNEIGGGSVRIHQDDIQERMFEALGFTKEAAHEQFGFLLDAFKYGVPPHAGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
           A G+DR+VML+    ++R+V  FP  ++   L+  SPS VS
Sbjct: 540 AYGLDRLVMLMAKVDSIRDVIAFPKVKDASCLMTQSPSRVS 580


>gi|212716936|ref|ZP_03325064.1| hypothetical protein BIFCAT_01880 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660221|gb|EEB20796.1| hypothetical protein BIFCAT_01880 [Bifidobacterium catenulatum DSM
           16992]
          Length = 599

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 230/605 (38%), Positives = 347/605 (57%), Gaps = 39/605 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++    VG  V LSGWV R R HGG+ F+D+RD+ G+ QVV   +    ++A+
Sbjct: 6   YRTHHATEVTEELVGQKVTLSGWVDRRRDHGGVAFIDLRDNTGLVQVVIYDE----DMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117
            +RSE+V+ + G V  R     N ++ TG+IE+ A+ IE+L+ ++ LP  V        E
Sbjct: 62  PLRSEFVIQVVGEVRLRPDGNENDHLATGKIEVVAESIEVLAKSDALPFQVSTALENESE 121

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR ++ +N+  R+++  + R  +    F E  TP +  S+PEG
Sbjct: 122 NKLPGEEVRLKYRYLDLRRPSMQRNLKLRSQMSKAARHALEEMGFEEVETPTMIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294
           LDMEM+FV+Q+D++   E V+  +++  S G  +     RI + +A+ +YG+DKPDLR  
Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYEIQLPIQRITWQEAMDKYGSDKPDLRFG 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353
           NP+I   +T++F ++ FRVF           V A+  KGG    R   D   +WA+ +G 
Sbjct: 299 NPLI--ELTDYFKNTPFRVFQAPY-------VGAVLFKGGAATPRRQFDAWQDWAKQRGA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAY+ +   E+G +   GPVAK+L+      ++  +  +DGD+ FF AG  +      
Sbjct: 350 KGLAYVVFA--ENGELK--GPVAKNLSEEERAGLKEAVGAEDGDAVFFAAGRRISAQELL 405

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE---------EKKIDFAHNPFTMPQG 464
              R  +A   G++  + F F W++DFP ++  ++           K    H+PFTMP  
Sbjct: 406 GAVRVELADRAGLLKPDDFAFTWVVDFPLFKAADDPDDDDVAVGHSKWTSMHHPFTMPSK 465

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D     +  YD+VCNG E+  G +R H  ++  +    +GI+ E   ++FG 
Sbjct: 466 DWIDTFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGITPEEAADKFGF 525

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPH GIA G DR   +L GA ++R+V  FP +    D L G+P+ +S EQ 
Sbjct: 526 LLEAFKYGAPPHAGIALGWDRTAAILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585

Query: 585 RELGL 589
            E G+
Sbjct: 586 AETGV 590


>gi|220916524|ref|YP_002491828.1| aspartyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254781710|sp|B8JH60|SYD_ANAD2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219954378|gb|ACL64762.1| aspartyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 603

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 223/601 (37%), Positives = 342/601 (56%), Gaps = 16/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTHSCG+L  +D+G  V L GWV+  R HGG +F+D+RD  G+TQVV   D      E+A
Sbjct: 10  RTHSCGELTKADIGKEVVLFGWVNNRRDHGGAVFIDLRDRAGLTQVVFEEDVRPDVHELA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R E+ + + G V+SR    +N  + TG+IE+ A  +EI + +E  P  +  E +  E
Sbjct: 70  GQLRLEYCVGVRGKVVSRGG-NVNPKLRTGEIEVHASDLEIFNRSEPAPFQIEDEIDTGE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R +YR+LDLRR  L + ++ R ++ +  R     + F+E  TP +   +P GAR+FLV
Sbjct: 129 EKRLQYRYLDLRRAPLQRTLMTRAKVNHLTRNYFTDKGFLELETPFMVKYTPGGARNFLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYAL ++PQ +KQL M +GFDRYFQI  CFRDED R DR P EF Q+D+EMS
Sbjct: 189 PSRLNPGKFYALAESPQLFKQLYMMAGFDRYFQIVRCFRDEDLRLDRQP-EFTQIDVEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR---NPIIM 299
           FVEQ+D+ + ME ++  +++E   G  +   F R+ +++++ +YG DKPDLR     +++
Sbjct: 248 FVEQNDVFDVMEGLVVKLWKEVL-GIEIPRPFQRMPFEESMAKYGNDKPDLRFDMPHVVL 306

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++          +  + +      +   +PA     +R   D++ E+ +  G  GLA  
Sbjct: 307 TDLVRQHDGGGVPLMHEAVKAKGIVKAMRVPAS-ANFSRTEIDKLEEYVKGMGAKGLARA 365

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G      P+AK +     +AI    + + GD   F  G      +  A+ R H
Sbjct: 366 --KVGEGGEWT-QSPLAKTITPALRQAINEACEAKPGDLLLFQFGKESVVHTVMANLRVH 422

Query: 420 IAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           +A+ +G+I    +   + F W+++ P +E++EE  +   AH+ FT P         +D  
Sbjct: 423 LAKRMGLIPEYGSGGAWRFLWVVNPPLFEYDEESGQWAAAHHAFTRPHDSDLQFLESDPG 482

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            +  ++YDLV NGFEI  G IR H  EV  + F  +GI+ E   ++FG L  A + G PP
Sbjct: 483 KVNCYRYDLVLNGFEIGGGSIRLHDPEVQARVFKAMGITDEEARSKFGFLLDALKMGAPP 542

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL GA+++R+V  +P +Q   DL+ G+P  V   QLREL ++    P
Sbjct: 543 HGGIALGMDRLVMLLTGAESLRDVVAWPKTQKGTDLMTGAPGDVDARQLRELYVKSTYEP 602

Query: 596 K 596
           K
Sbjct: 603 K 603


>gi|224282750|ref|ZP_03646072.1| aspartyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313139908|ref|ZP_07802101.1| aspartyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313132418|gb|EFR50035.1| aspartyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 598

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/605 (38%), Positives = 343/605 (56%), Gaps = 39/605 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V L+GWV R R HGG+ F+D+RD+ G+ Q+V   +    E+A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDNSGLVQIVIYDE----EMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117
            +RSE+V+ + G V  R     N ++ TG+IE+  + I++L+ ++ LP  V        E
Sbjct: 62  PLRSEFVIQVTGEVRLRPDGNENTHLATGKIEVVVETIDVLAKSDALPFQVSTALENESE 121

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEEMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294
           LDMEM+FV+Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYDVQLPIQRITWQDAMDKYGSDKPDLRFG 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353
           NP++   +TE+F  + FRVF           V A+  KGG    R   D   EWA+ +G 
Sbjct: 299 NPLV--ELTEYFKDTPFRVFQADY-------VGAVVFKGGAATPRRQFDAWQEWAKQRGA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAY+     E G +   GPVAK+L+    E +   +  + GD+ FF AG         
Sbjct: 350 KGLAYV--SFTEDGELK--GPVAKNLSDSEREGLMAAVGAESGDAVFFAAGSRESSQLLL 405

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464
              R  +A+  G+++   F F W++DFP ++  ++    D A         H+PFTMP  
Sbjct: 406 GAVRVELARREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D     +  YD+VCNG E+  G +R H  ++  +  + +GI+ E  + +FG 
Sbjct: 466 DWIDKFDQDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQDRVLNVLGIAPEEAKEKFGF 525

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPH GIA G DR V +L GA  +R+V  FP +    D L G+P+ +S EQ 
Sbjct: 526 LLDAFKFGAPPHAGIALGWDRTVSILAGADTIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585

Query: 585 RELGL 589
            E G+
Sbjct: 586 AETGV 590


>gi|221124310|ref|XP_002161330.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 604

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/600 (39%), Positives = 349/600 (58%), Gaps = 21/600 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD A  F++A+
Sbjct: 4   RSHYCGLVTEALLGQTVTLCGWVNRRRDHGGVIFVDVRDREGYVQVVCDPDRAEMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I GLV +R   T N ++ +G+IE+   ++ +L+ +   P  +  E    E+
Sbjct: 64  DIRNEYCVQIKGLVRARPEGTTNDSLKSGKIEVLCHELIVLNESVTPPFQL-DEDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N++ R R+   +R  + A  F++  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPYMQNNLMLRYRVAMEVRKFLDANGFVDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS---NNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           + ++DI +  + ++  VF+     NT+      F  + Y DA R YG+DKPDLR  +   
Sbjct: 242 LTEEDIRDMFQGMITTVFK-----NTIGVDLGEFPVMTYQDAARLYGSDKPDLRVNLEFA 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEV-WAIP---AKGGGGNRAFCDRMNEWARSQGQPGL 356
            +T+     +F+VFS   ++  G  V   IP   A+ GG +R   D   E+ +  G  GL
Sbjct: 297 ELTDVMKDVDFKVFSGAATMKGGRVVALRIPGGSAENGGISRGEIDAYTEFVKIYGAKGL 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AYI       G      P+ K+++     A+  R   Q+GD  FF A D  K  + A  A
Sbjct: 357 AYIRVNDLSKGRDGLQSPIVKNIHDAALNAVLERTGAQNGDLIFFGA-DKEKIVNDAIGA 415

Query: 417 -RNHIAQ-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            R  I   E G  N      ++  W++DFP +E++EE ++    H+PFT P+ G E    
Sbjct: 416 LRIKIGHSEFGKKNGLFTGGWKPLWVVDFPMFEYDEESQRYTAVHHPFTAPKEGHEDWMV 475

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
                  +  YD+V NG+E+  G +R H ++V  + F  + I+ E  + +FG L  A Q 
Sbjct: 476 TAPEKCISQGYDMVLNGWEMGGGSVRIHRADVQQKVFDALKITPEEAQLKFGFLLDALQY 535

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G+DRIV L+ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+
Sbjct: 536 GAPPHGGLAFGLDRIVTLMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRL 595


>gi|149926629|ref|ZP_01914889.1| aspartyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149824558|gb|EDM83774.1| aspartyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 601

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 228/606 (37%), Positives = 357/606 (58%), Gaps = 15/606 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEI 61
           + RT  CG++  + +G  + L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F  
Sbjct: 2   KMRTDYCGNVSQAYLGQTIALCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDLADVFST 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++R+E+ + ++GLV +R   T N+N+ +G +E+  + +EIL+ +   P  +  E    
Sbjct: 62  AETLRNEFCVRVEGLVRARPEGTENSNLKSGAVEVLCKGLEILNASVTPPFQLDDE-NLS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R  +R LDLRR  + KN++ R ++  ++R  + A+ F++  TP+LT S+PEGARD+L
Sbjct: 121 ETTRLTHRVLDLRRPQMQKNLMLRYKVAMAIRNHLDAQGFVDIETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G F+ALPQ+PQ +KQ+LM +G+DRY+QI  CFRDED R+DR P EF Q+D+E 
Sbjct: 181 VPSRVHAGEFFALPQSPQLFKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQVDIET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E+++R VF++  +   + N F  + Y +A+ R+G+DKPDLR  +    
Sbjct: 240 SFLGEQEIRDLFEDMIRKVFKQTMDVE-LQNPFPVMPYSEAMARFGSDKPDLRVKMEFTE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +T+     +F+VFS   +++ G  V A+   GG    R+  D   ++    G  GLA+I 
Sbjct: 299 LTDIMKDVDFKVFSGPANMDNG-RVVALRVPGGAEIPRSEIDNYTKFVGIYGAKGLAWIK 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA---- 416
                 G      P+ K+++      +  R    DGD  FF A D  K  + A  A    
Sbjct: 358 VNELAKGRDGLQSPIVKNIHDTALNELLKRSGAADGDILFFGA-DKAKVVNDAMGALRLK 416

Query: 417 --RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
              +   Q+ G++    +E  W++DFP +E +EE  +    H+PFT P+ G E     D 
Sbjct: 417 IGHSEFGQKAGLVQGK-WEPLWVIDFPMFELDEEAGRWVACHHPFTSPKDGHEDYLTTDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               A  YD+V NG+E+  G +R H  +V  + F  + IS+E    +FG L  A Q G P
Sbjct: 476 GKCIAKAYDMVLNGWELGGGSVRIHKEKVQSKVFRALNISEEEAAAKFGFLLDALQYGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+ + 
Sbjct: 536 PHGGLAFGLDRIVTMMSGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRLRQT 595

Query: 595 -PKKIL 599
            PK ++
Sbjct: 596 EPKNVV 601


>gi|289425292|ref|ZP_06427069.1| aspartate--tRNA ligase [Propionibacterium acnes SK187]
 gi|289154270|gb|EFD02958.1| aspartate--tRNA ligase [Propionibacterium acnes SK187]
 gi|313764303|gb|EFS35667.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313791990|gb|EFS40091.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313802060|gb|EFS43294.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313812794|gb|EFS50508.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313827646|gb|EFS65360.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|313838881|gb|EFS76595.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314915293|gb|EFS79124.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314918157|gb|EFS81988.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314920233|gb|EFS84064.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314931756|gb|EFS95587.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314958053|gb|EFT02156.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314962646|gb|EFT06746.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314967489|gb|EFT11588.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|315077862|gb|EFT49913.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|315098685|gb|EFT70661.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315101312|gb|EFT73288.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|327450631|gb|EGE97285.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327453291|gb|EGE99945.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
 gi|327454031|gb|EGF00686.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328753289|gb|EGF66905.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
 gi|328754049|gb|EGF67665.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
          Length = 606

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 231/595 (38%), Positives = 334/595 (56%), Gaps = 23/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++    G  +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF       P      +P       R F D   EWAR++G  GLAYI   + 
Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G     GPVAK+++      I  ++  + GD+ FF AG           AR  I +  
Sbjct: 352 DEG--VPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P ++  +E E   D A         H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G+
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAGV 584


>gi|167626917|ref|YP_001677417.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189082099|sp|B0TW08|SYD_FRAP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167596918|gb|ABZ86916.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 589

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 219/594 (36%), Positives = 337/594 (56%), Gaps = 8/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+        V + GWVHR R HGG+IFLDIRD  G+ Q+V NP+S  F++A S
Sbjct: 2   RTHYSSDVNEKLQNQKVTICGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPESKAFKVADS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R E+V+   G V  R     N N+ +G++E+  + +EI++ ++ +P  +   +   E +
Sbjct: 62  LRGEYVIKATGTVNLRPEGQENKNLASGKVEIIGEDLEIVNKSKTIPFQLDDFQSTGEDV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 122 KLKYRYIDLRRPEMQNKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+Q+  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQVVKCFRDEDLRADRQP-EFTQIDIEASFI 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+  + G      F  + Y +A+ +YG+DKPDLR P+   N+ E
Sbjct: 241 DEAFIMSTMEKMIAGLFDA-TIGVKFDTPFQVMTYAEAMDKYGSDKPDLRIPLEFVNIKE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG    +R   D   ++    G  GLAYI   
Sbjct: 300 DMKNEEFKVFSGPAN-DPEARVVAMRVPGGNDKLSRKKIDEYTKFVGIYGARGLAYIKIN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   Q GD  FF A             R  I +
Sbjct: 359 SLSEGKEGLQSPIVKNISEETLFKVIEKTGAQVGDVLFFGAAKAKIVNDSMGALRAKIGE 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +  I   + +   W++DFP +E  +++ ++   H+PFT P+         D  ++ +  Y
Sbjct: 419 DFEIFTKD-WAPLWVVDFPMFE--KDDNRLYAVHHPFTAPKVDTVEELTKDPENLLSRAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  ++  + F+ +GIS E    +FG +  A   G P HGGIA G
Sbjct: 476 DMVINGYEVGGGSIRIHRQDMQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR++MLL    N+R+V  FP +Q    L+  +PS VS+EQL ELG+ + +  K
Sbjct: 536 VDRLIMLLTNTTNIRDVIAFPKTQTASCLMTEAPSNVSLEQLNELGIAVKKEDK 589


>gi|256825079|ref|YP_003149039.1| aspartyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688472|gb|ACV06274.1| aspartyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 610

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 236/603 (39%), Positives = 329/603 (54%), Gaps = 36/603 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+ FLD+RD  G+ QVVA  +      A  
Sbjct: 3   RTHEAGTLRAEHAGQTVTLTGWVARRRDHGGVAFLDLRDASGVAQVVARDEVLESGGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+V+ I G V  R    +N+ + TG+IE+ A ++E+L+ A  LP  +    E  E  
Sbjct: 63  LRNEYVVKIVGEVRVRPEGNVNSELPTGEIEVVAAELEVLNTAAPLPFQIDERVEVGEEA 122

Query: 125 RFKYRFLDLRR---DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           R K+R+LDLRR    +  + +  R++   + R  +    F+E  TP LT S+PEGARDFL
Sbjct: 123 RLKHRYLDLRRPGKGSAGEALRLRSKANAAARRVLEEHAFVEVETPTLTRSTPEGARDFL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G +YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 183 VPARLAPGKWYALPQSPQLFKQLLMVAGLERYYQIARCYRDEDFRADRQP-EFTQLDIEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV Q+D++   E + R ++     G  V   F RI Y +A+ +YG+DKPDLR  + + +
Sbjct: 242 SFVTQEDVIALGEEIARALWALI--GVDVPAPFPRITYTEAMEKYGSDKPDLRFDLELTD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360
            TE F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+ 
Sbjct: 300 CTEFFAETPFRVFQAPY-------VGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL 352

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G ++  GPV+K+++      I      Q GD  FF AG           AR  I
Sbjct: 353 --VGEDGELS--GPVSKNISDAEKAGIAAHTGAQPGDCIFFAAGPAKAARGLLGAARLEI 408

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQ----GGM 466
               G+I+ + + F W++D P +E   +          E      H+ FT P+       
Sbjct: 409 GHRCGLIDQDAWSFLWVVDAPLFEPAADAVASGDVAVGEGAWTAVHHAFTSPRDEWLDSF 468

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
           E   G  L    A+ YD+VCNG EI  G IR H  +V  + F  +G+S+E  + +FG L 
Sbjct: 469 EEKPGEAL----AYAYDMVCNGNEIGGGSIRVHRRDVQERIFKVMGLSEEEAQEKFGFLL 524

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            AF  G PPHGGIA G DRIV LL G+ ++R V  FP S    D L  +P+ +S +Q  E
Sbjct: 525 EAFSYGAPPHGGIAFGWDRIVALLSGSDSIRNVIAFPKSGGGYDPLTDAPAPISAQQREE 584

Query: 587 LGL 589
            G+
Sbjct: 585 AGV 587


>gi|209519041|ref|ZP_03267849.1| aspartyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209500553|gb|EEA00601.1| aspartyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 599

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 234/600 (39%), Positives = 341/600 (56%), Gaps = 10/600 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F++A+
Sbjct: 4   RSEYCGLVTEELLGQSVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRADMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + G+V  R   T NA++ +G+IE+    + +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQVKGVVRGRPEGTTNASLKSGKIEVLCHDLIVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+  + G  +   F  + Y +A+RR+G+DKPDLR  +    +T
Sbjct: 242 LSEQEIRDLFEAMIRHVFKT-TIGVQLDEKFPVMEYAEAMRRFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMRDVDFKVFSTPANTKDGRVAALRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422
              G      P+ K+L+    +AI  R   QDGD  FF A D  K  + +  A R  I  
Sbjct: 361 AAKGRDGLQSPIVKNLHDEALKAIIERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            E G  N    + ++  W++DFP +E++EE+ +   AH+PFT P+         D     
Sbjct: 420 SEFGKANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCL 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV  + F  + I+ E  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWEIGGGSVRIYREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           IA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+     K+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSEVDERQLRELHIRLRSPEPKV 599


>gi|241667494|ref|ZP_04755072.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876040|ref|ZP_05248750.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842061|gb|EET20475.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 589

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 219/594 (36%), Positives = 337/594 (56%), Gaps = 8/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+        V + GWVHR R HGG+IFLDIRD  G+ Q+V NP+S  F++A S
Sbjct: 2   RTHYSSDVNEKLQNQKVTICGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPESKAFKVADS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R E+V+   G V  R     N N+ +G++E+  + +EI++ ++ +P  +   +   E +
Sbjct: 62  LRGEYVIKATGTVNLRPEGQENKNLASGKVEIIGEDLEIVNKSKTIPFQLDDFQSTGEDV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 122 KLKYRYIDLRRPEMQNKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+Q+  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQVVKCFRDEDLRADRQP-EFTQIDIEASFI 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+  + G      F  + Y +A+ +YG+DKPDLR P+   N+ E
Sbjct: 241 DEAFIMSTMEKMIAGLFDA-TIGVKFDTPFQVMTYAEAMDKYGSDKPDLRIPLEFVNIKE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG    +R   D   ++    G  GLAYI   
Sbjct: 300 DMKNEEFKVFSGPAN-DPEARVVAMRVPGGNDKLSRKKIDEYTKFVGIYGARGLAYIKIN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   Q GD  FF A             R  I +
Sbjct: 359 SLSEGKEGLQSPIVKNISEETLFKVIEKTGAQVGDVLFFGAAKAKIVNDSMGALRAKIGE 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +  I   + +   W++DFP +E  +++ ++   H+PFT P+         D  ++ +  Y
Sbjct: 419 DFEIFTKD-WAPLWVVDFPMFE--KDDNRLYAVHHPFTAPKVETVEELTKDPENLLSRAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  ++  + F+ +GIS E    +FG +  A   G P HGGIA G
Sbjct: 476 DMVINGYEVGGGSIRIHRQDMQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR++MLL    N+R+V  FP +Q    L+  +PS VS+EQL ELG+ + +  K
Sbjct: 536 VDRLIMLLTNTTNIRDVIAFPKTQTASCLMTEAPSNVSLEQLNELGIAVKKEDK 589


>gi|225352759|ref|ZP_03743782.1| hypothetical protein BIFPSEUDO_04389 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156366|gb|EEG69935.1| hypothetical protein BIFPSEUDO_04389 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 599

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 231/605 (38%), Positives = 347/605 (57%), Gaps = 39/605 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++    VG  V LSGWV R R HGG+ F+D+RD+ G+ QVV   +    ++A+
Sbjct: 6   YRTHHATEVTEELVGQKVTLSGWVDRRRDHGGVAFIDLRDNTGLVQVVIYDE----DMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117
            +RSE+V+ + G V  R     N ++ TG+IE+ A+ IE+L+ ++ LP  V        E
Sbjct: 62  PLRSEFVIQVVGEVRLRPDGNENDHLATGKIEVVAENIEVLAKSDALPFQVSTALENESE 121

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR ++ +N+  R+++  + R  +    F E  TP +  S+PEG
Sbjct: 122 NKLPGEEVRLKYRYLDLRRPSMQRNLKLRSQMSKAARHALEEMGFEEVETPTMIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294
           LDMEM+FV+Q+D++   E V+  +++  S G  +     RI + +A+ +YG+DKPDLR  
Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYEIQLPIQRITWQEAMDKYGSDKPDLRFG 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353
           NP+I   +T++F ++ FRVF           V A+  KGG    R   D   +WA+ +G 
Sbjct: 299 NPLI--ELTDYFKNTPFRVFQAPY-------VGAVLFKGGAATPRRQFDAWQDWAKQRGA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAY+ +   E+G +   GPVAK+L+      ++  +  +DGD+ FF AG         
Sbjct: 350 KGLAYVVFA--ENGELK--GPVAKNLSEEERAGLKEAVGAEDGDAVFFAAGRRTSAQELL 405

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464
              R  +A   G++  + F F W++DFP ++  ++    D A         H+PFTMP  
Sbjct: 406 GAVRVELADRAGLLKPDDFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D     +  YD+VCNG E+  G +R H  ++  +    +GI+ E   ++FG 
Sbjct: 466 DWIDTFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGITPEEAADKFGF 525

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPH GIA G DR   +L GA ++R+V  FP +    D L G+P+ +S EQ 
Sbjct: 526 LLEAFKYGAPPHAGIALGWDRTAAILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585

Query: 585 RELGL 589
            E G+
Sbjct: 586 AETGV 590


>gi|153217299|ref|ZP_01951052.1| aspartyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|153826030|ref|ZP_01978697.1| aspartyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|254291590|ref|ZP_04962380.1| aspartyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|297578768|ref|ZP_06940696.1| aspartyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|124113681|gb|EAY32501.1| aspartyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|149740250|gb|EDM54397.1| aspartyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|150422542|gb|EDN14499.1| aspartyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|297536362|gb|EFH75195.1| aspartyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 591

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK L     +AI  R   Q GD   F   D  K  + A  A R    
Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADTAKVVAEALGALRLKAG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +ELGI N + +   W++DFP +E +++E  +   H+PFT P     E LK N   ++ + 
Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEAL-SN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +
Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583


>gi|187476630|ref|YP_784653.1| aspartyl-tRNA synthetase [Bordetella avium 197N]
 gi|97196548|sp|Q2L1K6|SYD_BORA1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|115421216|emb|CAJ47721.1| aspartyl-tRNA synthetase [Bordetella avium 197N]
          Length = 596

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 230/595 (38%), Positives = 344/595 (57%), Gaps = 14/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT   G +    +G  V L GWV+R R HGG+IF+D+RD  G+ Q+V +PD+A  F  A+
Sbjct: 2   RTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRTGLAQIVFDPDNAGAFGTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + GLV  R   T NA + +G++E+  + +EIL+ +   P  +  +    E+
Sbjct: 62  RLRNEFCVRVTGLVRERPQGTTNAELASGEVEVLCRDVEILNPSVTPPFQL-DDDNLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + +N++ R R+   +R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPQMQRNLMLRYRVSIEVRKFLDQLGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 181 SRVNAGHFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I    E+++R VF+   N + + + F  + + +A+ R+G+DKPD+R  +   +V 
Sbjct: 240 LTETEIRAVFESMIRHVFKVVQNVD-LPDPFPIMTWTEAMARFGSDKPDMRVNLEFTDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF+   +   G  V A+   GGG  +R+  D   ++    G  GLAYI   
Sbjct: 299 DIMRDVDFKVFASAATTQ-GSRVVALRVPGGGELSRSEIDAYTQFVGIYGAKGLAYIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416
               G      P+ K+L+      +  R   QDGD  FF A D  K  + A  A      
Sbjct: 358 DVAKGREGLQSPIVKNLHDAALAELVKRTGAQDGDIIFFGA-DRAKVVNDALGALRVKIG 416

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +   ++ G+ +   +   W++DFP +E++EEE +   AH+PFT P+ G E     D   
Sbjct: 417 HSEFGKKTGLFSGG-WRPLWVVDFPMFEYDEEEGRYTAAHHPFTSPKDGHEDFLETDPSQ 475

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G +R H  EV  + F  + I  +    +FG L  A Q G PPH
Sbjct: 476 AFAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPDEAREKFGFLLDALQYGAPPH 535

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GGIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS+V  +QLREL +R+
Sbjct: 536 GGIAFGLDRIVTMMTGADSIRDVIAFPKTQRAQDLLTQAPSSVDDKQLRELHIRL 590


>gi|50842655|ref|YP_055882.1| aspartyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|62287550|sp|Q6A8J1|SYD_PROAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|50840257|gb|AAT82924.1| aspartyl-tRNA synthetase [Propionibacterium acnes KPA171202]
          Length = 606

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 231/595 (38%), Positives = 334/595 (56%), Gaps = 23/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKGVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++    G  +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF       P      +P       R F D   EWAR++G  GLAYI   + 
Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G     GPVAK+++      I  ++  + GD+ FF AG           AR  I +  
Sbjct: 352 DEG--VPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P ++  +E E   D A         H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G+
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAGV 584


>gi|153803294|ref|ZP_01957880.1| aspartyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124121174|gb|EAY39917.1| aspartyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 591

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK L     +AI  R   Q GD   F   D  K  + A  A R    
Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +ELGI N + +   W++DFP +E +++E  +   H+PFT P     E LK N   ++ + 
Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEAL-SN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +
Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583


>gi|238028612|ref|YP_002912843.1| aspartyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237877806|gb|ACR30139.1| Aspartyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 599

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 234/599 (39%), Positives = 339/599 (56%), Gaps = 10/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRGRPDGTINAGLKSGKIEVLCHELTVLNPSVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF + + G  +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEEMIRHVFHK-TIGVELGAKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSAPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422
              G      P+ K+L+  +  AI  R   QDGD  FF A D  K  + +  A R  I  
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            E G  N    + ++  W++DFP +E+++E+ +   AH+PFT P+         D     
Sbjct: 420 SEFGKANGLVESGWKPLWVIDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCL 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R    +V  + F  + I  E  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWEIGGGSVRIFQEDVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           IA G+DRI+ ++ GA ++R+V  FP +Q   DLL  +PS V   QL+EL +R+ +  +K
Sbjct: 540 IAFGLDRIITMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLKELHIRLRQPEQK 598


>gi|88809467|ref|ZP_01124975.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetase, class I
           [Synechococcus sp. WH 7805]
 gi|88786686|gb|EAR17845.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetase, class I
           [Synechococcus sp. WH 7805]
          Length = 611

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/601 (37%), Positives = 343/601 (57%), Gaps = 24/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL    +   V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSNGCGDLRKQHIDDTVQLCGWVDRRRDHGGVIFIDLRDRTGTVQITVDPDLGAEAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119
           + +RSE VL I G V +R AE++N  + TG +E+ A  I +L SV   LP PV    E  
Sbjct: 62  EHLRSETVLQISGKVRARPAESLNEKLATGAVEVLASGISVLNSVKGNLPFPVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR  ++ N+  R + I + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAQTIQAARRFLENEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YVLPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q+ IL   E+++  +++    G  +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQEQILQLNESLICSIWKAV-KGVELPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-----NEWARSQGQP 354
            NV++      F+VFS  +      +  A+P    GGN A  +       + ++ +Q   
Sbjct: 300 TNVSDIVKDMGFKVFSGAVKSGGSVKCIAVP----GGNDALSNVRIKPGGDVFSEAQAAG 355

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
                F R+ + G +  +G +  +L+    + +  R   + G    F AGD         
Sbjct: 356 AGGLAFIRVRDGGEIDTIGAIKDNLSDEQKQELLSRTGAEPGTLLLFGAGDTATVNKALD 415

Query: 415 DARNHIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGM 466
             R ++A+ELG++    + + + F W++DFP +E+N +E + +  H+PF  P     G  
Sbjct: 416 RVRQYLAKELGMVKPDRDNDQWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNQEDLGSN 475

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
           E+     L + +A  YDLV NG E+  G +R H S +  Q    VG+  E  + +FG L 
Sbjct: 476 ETEWETTLPTARAQAYDLVLNGLELGGGSLRIHDSSLQRQVLQTVGLPLEEAQEQFGFLM 535

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            A   G PPHGG+A GIDR+VMLL G +++R+   FP +Q    L+  +P  V+ +QL E
Sbjct: 536 DALDVGAPPHGGLAFGIDRMVMLLAGEESIRDTIAFPKTQQARCLMTNAPGGVADKQLEE 595

Query: 587 L 587
           L
Sbjct: 596 L 596


>gi|317496044|ref|ZP_07954404.1| aspartyl-tRNA synthetase [Gemella moribillum M424]
 gi|316913619|gb|EFV35105.1| aspartyl-tRNA synthetase [Gemella moribillum M424]
          Length = 590

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/569 (39%), Positives = 348/569 (61%), Gaps = 19/569 (3%)

Query: 31  RPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINAN 88
           R  G +IF+D+RD  G+ Q V     ++   E+A ++R+E+V+ I+G V+ R+  T+N  
Sbjct: 32  RDLGNLIFIDVRDRMGVVQCVFSGEKNNELHELASTLRNEFVISIEGEVVLRNENTVNDK 91

Query: 89  IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRI 148
           I TG++E+ A K+EILS A+ LP  +       E +R KYR+LDLRR  L + +  R++I
Sbjct: 92  IATGKVEIIADKLEILSKAKTLPFVLDDASLSSEELRLKYRYLDLRRTELAEVLHLRSKI 151

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             + R  +    F++  TPILT S+PEGARD+LVPSRV+ G FYALPQ+PQ +KQLLM +
Sbjct: 152 TKATRDYLDNNMFVDVETPILTKSTPEGARDYLVPSRVHPGEFYALPQSPQLFKQLLMVA 211

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDRY+Q+A CFRDED R+DR P +F Q+DMEMSF+ Q++IL  +E ++  V +E   G 
Sbjct: 212 GFDRYYQVARCFRDEDLRADRQP-DFTQIDMEMSFMSQEEILTMIEGLIAHVMKEV-KGI 269

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            V   F R+ Y++A+ R+G+DKPD R  + + +V++   + +F+VFS   +V  G  V  
Sbjct: 270 DVVTPFPRLDYEEAMERFGSDKPDTRFGMELKDVSDLVKNLDFKVFSN--AVEQGGAVKC 327

Query: 329 IPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386
           I AKG     +R   D + ++  + G  GLA++  ++ E G     G +AK       + 
Sbjct: 328 IVAKGCAEQYSRKDIDALGKYVANYGAKGLAWV--KVTEEGL---NGAIAKFFTDEVAQE 382

Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEW 445
           + VR+D + GD   F A D  K C  +  A R  +A +L +I+ + + + W++++P  E+
Sbjct: 383 LVVRVDAEVGDIILF-AADSKKVCYASLGALRQKLAADLDLIDKDKYNYLWVVNWPLLEY 441

Query: 446 NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF--QYDLVCNGFEIASGGIRNHMSEV 503
           +EE  K   AH+PFTMP+  +E ++  +    KA+   YD+V NG+E+  G IR +  +V
Sbjct: 442 DEERGKYSAAHHPFTMPK--IEDVELLETAPEKAYAQAYDIVLNGYELGGGSIRIYDKDV 499

Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               F  +G S+E  +++FG L  AF+ G+PPHGG A G+DR VMLL G  N+R+   FP
Sbjct: 500 QSSMFKALGFSEEEAKSQFGFLLDAFEYGVPPHGGCALGLDRFVMLLAGRDNLRDTIAFP 559

Query: 564 MSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            +    D +  +PS V +EQL EL + ++
Sbjct: 560 KTAAAADPMTQAPSPVDLEQLLELNIALL 588


>gi|260779181|ref|ZP_05888073.1| aspartyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605345|gb|EEX31640.1| aspartyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 592

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 233/596 (39%), Positives = 342/596 (57%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD A  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ A+ LPL  F ++   E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPDSQVNKDMATGEVEIIAKGLEIINRADVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D++  T E ++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADEVRATTEKMVRDMWQELLNVDL--GQFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V  I   GG    R   D   E+    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGASLTRKQIDGYGEFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN      I  R   + GD   F A             R  + +
Sbjct: 356 DRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANTVAEAMGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +L + + N +   W++DFP +E  ++E  +   H+PFT P G   E LK N   +  +  
Sbjct: 416 DLELTDENAWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVNAEELKAN-PAAANSNA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H +E+    F  +GI  E  + +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHNAEMQAAVFDILGIDAEEQQLKFGFLLDALKFGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K
Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSVANPAALEELAIAVTAAKEK 589


>gi|160933302|ref|ZP_02080690.1| hypothetical protein CLOLEP_02147 [Clostridium leptum DSM 753]
 gi|156867179|gb|EDO60551.1| hypothetical protein CLOLEP_02147 [Clostridium leptum DSM 753]
          Length = 693

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 228/589 (38%), Positives = 341/589 (57%), Gaps = 12/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RT  CG L  ++V     + GWV   R  GG+IF+D+RD  GI QVV    N     F  
Sbjct: 3   RTSYCGALRETNVNQIHTVMGWVQNKRDMGGVIFIDLRDREGILQVVFDGRNLTPEAFAA 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A++++ E V+ ++G +  R  ET N  ++TG IEL+A+K+E+LS A  LP  +       
Sbjct: 63  AEALKLESVIAVEGPLRIRGEETYNPKLVTGTIELAAKKLEVLSEAAALPFSMSEAGNVR 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +YRFLDLRR  L  N+  R R+   +   +  + F++  TP+LT S+PEGARD+L
Sbjct: 123 EELRLQYRFLDLRRPKLLNNLKFRHRLTKLIHDYLDGQGFLQVETPMLTKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ +KQLLM  G D+Y+QIA CFRDED R+DR P EF Q+DME+
Sbjct: 183 VPSRVHQGMFYALPQSPQIFKQLLMVGGVDKYYQIARCFRDEDLRADRQP-EFTQVDMEL 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+DIL  +E + + +F E + G      F R+ +  A+ RYG+DKPDLR  + + +
Sbjct: 242 SFVDQEDILEHLEKMFKHLFRE-ALGVEFQEPFPRLTWQQAMDRYGSDKPDLRFGLPIVD 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +T+      F VF K  +++ G  V A+  KG G   R+  + + E A   G  G+A+I 
Sbjct: 301 LTQQLKGCGFSVFRK--AIDEGGMVRAVNVKGHGNFTRSAIEELTEKALKLGAKGMAWI- 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             L + G    +  + K+ +    +++   +D + GD   F A      C      R  +
Sbjct: 358 -ALKDDGEPYSI--LTKYFSQEEFQSLLDAVDGKPGDFILFCADQFSTVCRTLGGLRLEL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A  LG+     + F  + DFP +E+++EE +    H+PFTMP         +D   ++A 
Sbjct: 415 ADMLGLRKPGDYRFLIVTDFPEFEYSQEEGRYLATHHPFTMPYPEDIPYLISDPARVRAQ 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+ SG +R H  +V  + F  +G S+E ++ RFG +  AFQ G PPHGG A
Sbjct: 475 AYDVVLNGVELGSGSMRIHQKDVQRKMFEALGFSEEQIQERFGFMVNAFQYGTPPHGGFA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            G+DR+ M +L A+++R+V  FP +++    +  +P+ V  +QL  LGL
Sbjct: 535 FGLDRLAMQMLEAESLRDVIAFPKNKDAVCPMTQAPNVVDPQQLEVLGL 583


>gi|159904361|ref|YP_001551705.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|238687134|sp|A9BDD8|SYD_PROM4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|159889537|gb|ABX09751.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 606

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 234/602 (38%), Positives = 348/602 (57%), Gaps = 26/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R++ CG L    + S V+L GWV R R HGG+IF+D+RD  G  Q+  +PD     F IA
Sbjct: 2   RSNYCGALRNEHINSKVQLCGWVDRCRDHGGVIFIDLRDSSGTMQITVDPDQGTDLFNIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYP 121
           +S+++E V+ + G V SR  E+IN  + TGQIE+ A  +++L+ V   LP  V    + P
Sbjct: 62  ESLKNETVIQVTGKVRSRPEESINKKLETGQIEVLADVLKVLNPVYGNLPFAVSVHDDEP 121

Query: 122 --ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR K+R+LDLRR+ + KN+  R   I + R  +  E FIE  TPILT S+PEGARD
Sbjct: 122 LKEEIRLKHRYLDLRRERMKKNLHLRHATIQTARNFLEEEGFIEVETPILTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV +G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED RSDR P EF QLDM
Sbjct: 182 YLVPSRVCEGEWFALPQSPQIFKQLLMVGGIERYYQVARCFRDEDLRSDRQP-EFTQLDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ Q++IL   E ++  ++++   G  +   F R+ + +++ RYGTD+PD R  + +
Sbjct: 241 EMSFMSQEEILCLNERLIACIWKKIK-GKDIKVPFPRLSWQESMDRYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN------RAFCDRMNEWARSQGQ 353
            +V+       F+VFS   ++  G  V  I  + G  +      +   D  NE A+  G 
Sbjct: 300 VDVSSIVKDIGFKVFSG--AIQAGGSVKCIKVEEGNQSISNVRIKPGGDVFNE-AQKAGA 356

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLA+I  R++    +  +G +  +LN      + ++   + GD   F AGD        
Sbjct: 357 KGLAFIRVRVN--NEIDTIGAIKDNLNNQQKNELLLKTKAKPGDLILFAAGDTEIVHKTL 414

Query: 414 ADARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GG 465
              R  +A+EL +I+     + + F W++DFP + +N++EK+ +  H+PF  P     GG
Sbjct: 415 DKVRQFLAKELRLISTGKSKDQWNFLWVIDFPMFNFNKDEKRHEAMHHPFCAPNAKDIGG 474

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
              L   +L   +A  YDLV NG E+  G +R H  E+  +    +GI+K+    +FG L
Sbjct: 475 DPGLWEENLPKARAQAYDLVLNGLELGGGSLRIHNPELQQKVLETIGIAKDEATEQFGFL 534

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             A + G PPHGG+A G+DRIVMLL    ++R+   FP +Q    L+  +P+ VS  QL+
Sbjct: 535 LNALEMGAPPHGGLAFGLDRIVMLLSEEDSIRDTIAFPKTQQARCLMAQAPNEVSKRQLK 594

Query: 586 EL 587
           EL
Sbjct: 595 EL 596


>gi|186475150|ref|YP_001856620.1| aspartyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|238689443|sp|B2JCV5|SYD_BURP8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|184191609|gb|ACC69574.1| aspartyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 599

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 231/600 (38%), Positives = 338/600 (56%), Gaps = 12/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F+ A+
Sbjct: 4   RSEYCGLVTEHLLGQTVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKTAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + G+V +R   T NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQVKGVVRNRPEGTTNAGLKSGKIEVLCHELNVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  + +  FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAMEVRKYLDSRGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E++ R VF+E + G  +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LSEQEIRDLFEDMTRHVFKE-TIGVELDAKFAVMPYSEAMSRFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKINE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+     AI  R   QDGD  FF A D  K  + +  A       
Sbjct: 361 VAKGRDGLQSPIVKNLHDAAIAAIIERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E++EEE +   AH+PFT P+         D    
Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDEEENRYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R    +V  + F  + I  E    +FG L  A Q G PPHG
Sbjct: 479 LAKAYDIVLNGWEIGGGSVRIFQEDVQSKVFRALKIGAEEARLKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           GIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+ +  +K
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSEVDERQLRELHIRLRQPEQK 598


>gi|213964056|ref|ZP_03392298.1| aspartyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213953282|gb|EEB64622.1| aspartyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 584

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 228/595 (38%), Positives = 343/595 (57%), Gaps = 21/595 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60
           YRTH+CG+L +S     V LSGWV RVR  G +I++D+RD YGITQ++ +    D A FE
Sbjct: 2   YRTHTCGELRLSHEKQQVTLSGWVQRVRNKGFMIWVDLRDRYGITQLIFDEERTDKAVFE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AK++  E V+ I G V+ R  E  NANI TG++E+    + +L+ +E  P  +    + 
Sbjct: 62  QAKTLSREDVIQIQGTVIKR--EAANANIPTGEVEILVTALTLLNHSELPPFTIEDNTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR  +  N++ R ++   +R  +  + FIE  TP+L  S+PEGARDF
Sbjct: 120 GEDLRMKYRYLDIRRTPVRDNLIFRHKVGIMVRNYLSEQGFIEVETPVLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNPGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+++T E + + + +E    +  +  F R+ Y +A++ YG DKPD+R  +   
Sbjct: 239 MSFVEQEDVISTFEGLAKHLLKELKGLDFGA--FPRMTYAEAMKTYGNDKPDIRFGMKFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357
            + +   H +F+VF      N    V  I   G     R   D + EW +    G  G+ 
Sbjct: 297 ELNDLAQHRDFKVF------NEAELVVGIAVPGANSYTRKEIDALVEWVKRPQVGASGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  + +E G+      V K  N  + +A   R   Q GD    ++G   K     +  R
Sbjct: 351 YV--KCNEDGSFK--SSVDKFYNEDDLKAWAERTGAQAGDLICILSGKANKVRGQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ LG+   + +   W++DFP  EW+EEE++    H+PFT P+     L  ++  ++
Sbjct: 407 MELAERLGLRKPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDSNPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG E+  G IR    E+  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 467 RANAYDLVLNGNEVGGGSIRIFNQELQAKMFELLGFTPEQAQAQFGFLMNAFKYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+A G DR+V LL G + +R+   FP + +  D+++ +PS +   QL+EL + +V
Sbjct: 527 GLAFGFDRLVALLGGQETIRDFIAFPKNNSGRDMMIDAPSPIDEAQLKELAIEMV 581


>gi|332519166|ref|ZP_08395633.1| aspartyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332045014|gb|EGI81207.1| aspartyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 582

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 224/592 (37%), Positives = 340/592 (57%), Gaps = 17/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
           YR+H+CG+L    + + V LSGWV + R  G I+++D+RD YGITQ+V + +       E
Sbjct: 2   YRSHNCGELTTKHINTEVTLSGWVQKSRDKGFIVWVDLRDRYGITQLVFDEERTSKDMLE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+S+  E+V+ + G V+ R+++  N N+ TG IE+   ++ IL+ A   P  +  + + 
Sbjct: 62  KAQSLGREFVIQVKGTVIERASK--NPNLPTGDIEILVSELIILNEALLPPFTIEDKTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LD+RR+ + ++++ R ++  ++R  +  + FIE  TP L  S+PEGARDF
Sbjct: 120 GEDIRMKYRYLDIRRNPVKESLIFRAKVTQAVRNYLSNDGFIEVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGEFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DILN  E + R + +E  NG  + + F R+ YDDA+R YG DKPD+R  +   
Sbjct: 239 MAFVEQEDILNVFEGLTRHLLKEV-NGVEI-DKFPRMLYDDAMRLYGNDKPDIRFGMEFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
            + E   H EF VF      N    V  I   GG    R   D++ +W +      L  +
Sbjct: 297 ELNEVTQHKEFGVF------NNAELVVGIAVPGGNSYTRKEIDKLIDWVKRPQVGALGMV 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R ++ G+      V K  +  +          + GD    ++GD  K  +  +  R  
Sbjct: 351 YSRCNDDGSFK--SSVDKFYDQEDLAKWAEVTSAKPGDLVCILSGDKNKVRAQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ LG+ +   F   W++DFP  E +EE       H+PFT P+ G   L       +KA
Sbjct: 409 LAERLGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQIELLDTKPGEVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H          ++G S++  + +FG L  AF+ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKATQAIMLKHLGFSEKEAKAQFGFLMDAFEYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+V +L G + +R+   FP + +  D+++ +P+ +  EQL+EL L++
Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAPIDSEQLKELNLKL 580


>gi|22126144|ref|NP_669567.1| aspartyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|51596362|ref|YP_070553.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108807431|ref|YP_651347.1| aspartyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108811693|ref|YP_647460.1| aspartyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145598364|ref|YP_001162440.1| aspartyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149366018|ref|ZP_01888053.1| aspartyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153949743|ref|YP_001401008.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162420653|ref|YP_001606848.1| aspartyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165926395|ref|ZP_02222227.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938888|ref|ZP_02227442.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166009225|ref|ZP_02230123.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210912|ref|ZP_02236947.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401503|ref|ZP_02307000.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420320|ref|ZP_02312073.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424399|ref|ZP_02316152.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167470433|ref|ZP_02335137.1| aspartyl-tRNA synthetase [Yersinia pestis FV-1]
 gi|186895403|ref|YP_001872515.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218929160|ref|YP_002347035.1| aspartyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229894767|ref|ZP_04509947.1| aspartyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229897469|ref|ZP_04512625.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229898116|ref|ZP_04513265.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901975|ref|ZP_04517096.1| aspartyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270490841|ref|ZP_06207915.1| aspartate--tRNA ligase [Yersinia pestis KIM D27]
 gi|294503881|ref|YP_003567943.1| aspartyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|24212411|sp|Q8ZEV0|SYD_YERPE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62287545|sp|Q66AU4|SYD_YERPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|122979648|sp|Q1C820|SYD_YERPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123246529|sp|Q1CJH0|SYD_YERPN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166200153|sp|A4TJK5|SYD_YERPP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166979995|sp|A7FID0|SYD_YERP3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238687248|sp|A9QYX8|SYD_YERPG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238691369|sp|B2K319|SYD_YERPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|21959105|gb|AAM85818.1|AE013828_9 aspartate tRNA synthetase [Yersinia pestis KIM 10]
 gi|51589644|emb|CAH21274.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108775341|gb|ABG17860.1| aspartyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108779344|gb|ABG13402.1| aspartyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115347771|emb|CAL20688.1| aspartyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145210060|gb|ABP39467.1| aspartyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149292431|gb|EDM42505.1| aspartyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152961238|gb|ABS48699.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162353468|gb|ABX87416.1| aspartyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165913251|gb|EDR31874.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165921616|gb|EDR38813.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991780|gb|EDR44081.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166208092|gb|EDR52572.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962015|gb|EDR58036.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167049199|gb|EDR60607.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056281|gb|EDR66050.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|186698429|gb|ACC89058.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|229680871|gb|EEO76966.1| aspartyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229688832|gb|EEO80899.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229693806|gb|EEO83855.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229702240|gb|EEO90259.1| aspartyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262362000|gb|ACY58721.1| aspartyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262365863|gb|ACY62420.1| aspartyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270339345|gb|EFA50122.1| aspartate--tRNA ligase [Yersinia pestis KIM D27]
 gi|294354340|gb|ADE64681.1| aspartyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320015269|gb|ADV98840.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 598

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/592 (39%), Positives = 343/592 (57%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A FE A 
Sbjct: 2   RTEYCGQLNLSHVGQSVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAFEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSE--PLPLDSNQINSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKSRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MSADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
                 EF+VFS   +   G  V A+   GG   +R   D   ++    G  GLA++   
Sbjct: 297 SLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQLSRKQIDEYGQFVGIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK L+    +AI V    + GD  FF A D  K  + A  A R  + 
Sbjct: 356 DRAAGLEGVQSPIAKFLSAEVLDAILVATQAESGDILFFGA-DSYKIVTDAMGALRLKVG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++L +     +   W++DFP +E ++ E  +   H+PFT P+    E L      +I A 
Sbjct: 415 RDLELTRLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKDMSPEQLAAAPTTAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI+++    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHRTEMQQTVFGILGITEDEQREKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V
Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584


>gi|115352827|ref|YP_774666.1| aspartyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122322244|sp|Q0BBZ1|SYD_BURCM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|115282815|gb|ABI88332.1| aspartyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 600

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/601 (38%), Positives = 339/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + I GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQIKGLVRNRPEGTVNAGLKSGKIEVLCHELNVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDATFPVMPYSEAMARFGSDKPDLRVQLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGGELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   +DGD  FF A D  K  + +  A       
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++E+ +   AH+PFT P+         D    
Sbjct: 420 SEFGKANGLVQAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+   E P
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQP 598

Query: 596 K 596
           K
Sbjct: 599 K 599


>gi|310287208|ref|YP_003938466.1| Aspartyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309251144|gb|ADO52892.1| Aspartyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 598

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/605 (38%), Positives = 342/605 (56%), Gaps = 39/605 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V L+GWV R R HGG+ F+D+RD+ G+ Q+V   +    E+A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDNTGLVQIVIYDE----EMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117
            +RSE+V+ + G V  R     N ++ TG+IE+  + I++L+ ++ LP  V        E
Sbjct: 62  PLRSEFVIQVTGEVRLRPDGNENTHLATGKIEVVVETIDVLAKSDALPFQVSTALENESE 121

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEEMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294
           LDMEM+FV+Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYDVQLPIQRITWQDAMDKYGSDKPDLRFG 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353
           NP++   +TE+F  + FRVF           V A+  KGG    R   D   EWA+ +G 
Sbjct: 299 NPLV--ELTEYFKDTPFRVFQADY-------VGAVVFKGGAATPRRQFDAWQEWAKQRGA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAY+     E G +   GPVAK+L+    E +   +  + GD+ FF AG         
Sbjct: 350 KGLAYV--SFTEDGELK--GPVAKNLSDSEREGLMAAVGAESGDAVFFAAGSRESSQLLL 405

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464
              R  +A+  G+++   F F W++DFP ++  ++    D A         H+PFTMP  
Sbjct: 406 GAVRVELARRAGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D     +  YD+VCNG E+  G +R H   +  +  + +GI+ E  + +FG 
Sbjct: 466 DWIDKFDQDPEHAMSDSYDIVCNGEEMGGGSVRIHRDGIQDRVLNVLGIAPEEAKEKFGF 525

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPH GIA G DR V +L GA  +R+V  FP +    D L G+P+ +S EQ 
Sbjct: 526 LLDAFKFGAPPHAGIALGWDRTVSILAGADTIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585

Query: 585 RELGL 589
            E G+
Sbjct: 586 AETGV 590


>gi|166712997|ref|ZP_02244204.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 588

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 230/602 (38%), Positives = 350/602 (58%), Gaps = 23/602 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + TG++E+ A +I IL+ A   PLP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRTGKVEVIATRISILNKAA--PLPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME++FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RRYG+DKPDLR  + 
Sbjct: 237 MELAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + +V E    SEF VF+   +   G  V A+   GG   +R   D     A   G  GLA
Sbjct: 296 LVDVAELVKSSEFPVFTAAANDADG-RVAALRIPGGATLSRKQIDEYAAHAAKYGAKGLA 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L E+G V+   P+AK  +  +  A+   +   +GD  FF AG   K   F    R
Sbjct: 355 YI--KLSETGEVS--SPIAKFFSEESFAALLKHVGASNGDIVFFGAGGYTKVSDFMGALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476
               ++  ++  + +   W+ DFP +EW++E ++    H+PFT P    +  L+ N   +
Sbjct: 411 LKAGKDFNLV-VDGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARTA 469

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPH
Sbjct: 470 V-SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   PK
Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV--RPK 586

Query: 597 KI 598
           ++
Sbjct: 587 QV 588


>gi|313677050|ref|YP_004055046.1| aspartyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312943748|gb|ADR22938.1| aspartyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 581

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 224/596 (37%), Positives = 347/596 (58%), Gaps = 25/596 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60
           +RTH CG+L + + G  V LSGWV RVR  GG++++D+RD YGITQ++      +    +
Sbjct: 2   HRTHHCGELRIENKGEKVILSGWVQRVRNKGGLLWIDLRDRYGITQLLCEEGKTNEDILK 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ V  E+VL   G V+ R ++  N  + TG +E+  +++ IL+ A+  P  +  + + 
Sbjct: 62  VARKVGREFVLQAKGEVLERFSK--NDKMATGDVEIFLEELNILNAAKTPPFTIEDDTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YR+LDLRR  + + +  R +++ + R  M  E F+E  TP+L  S+PEGARDF
Sbjct: 120 GEELRMQYRYLDLRRPAVREKLKLRHQLMQATRRFMDGEGFLEVETPVLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSRV++G FYALPQ+PQ +KQLLM SGFD+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRVHEGEFYALPQSPQTFKQLLMVSGFDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DILNT E +++ +F+E         +F R+ YD A++ YG+DKPD+R  +   
Sbjct: 239 MSFVEQEDILNTFEEMVKYLFKEVKGVEI--EDFERMTYDQAMKLYGSDKPDIRFGMPFV 296

Query: 301 NVTEHFVHSEFRVFSK---ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQPG 355
            + +      F VF +   ++ +N       +P+      R   D + E+ +    G  G
Sbjct: 297 ELNDQTQGKGFNVFDQAELVVGIN-------VPS-ASEYTRKQLDALTEYVKRPQIGAKG 348

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y+  + ++ G+      V K  +  + +A     + + GD    ++G+         +
Sbjct: 349 LVYV--KCNQDGSFK--SSVDKFYSQDDLKAWAEAAEAKAGDLLLVLSGEIDHTRRAMNE 404

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  +  ELG+ + N F+  W++DFP  EW+EE K+    H+PFT P+        +D  
Sbjct: 405 LRLKMGSELGLRDKNVFKPLWVLDFPLLEWDEETKRFHAMHHPFTSPKLEDMEFIESDPG 464

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            I+A  YD+V NG EI  G IR H   +  + F  +G ++E  + +FG L  AF+ G PP
Sbjct: 465 RIRANAYDMVINGVEIGGGSIRIHDKSLQQKMFKALGFTEEEAQKQFGFLMEAFEYGAPP 524

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGGIA G DR+  +  G+ ++R+   FP +    D+++ SP+T+S EQL+EL L I
Sbjct: 525 HGGIAFGFDRLCAMFGGSDSIRDYIAFPKNNAGRDVMIDSPATISPEQLKELHLSI 580


>gi|229515548|ref|ZP_04405007.1| aspartyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229347317|gb|EEO12277.1| aspartyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 591

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 343/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DLLKEVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK L     +AI  R   Q GD   F   D  K  + A  A R    
Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +ELGI N + +   W++DFP +E  ++E  +   H+PFT P     E LK N   ++ + 
Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-GDDEGNVAAMHHPFTSPLNLTPEQLKANPEEAL-SN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +
Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583


>gi|307130883|ref|YP_003882899.1| aspartyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306528412|gb|ADM98342.1| aspartyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 596

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/596 (39%), Positives = 343/596 (57%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F +A 
Sbjct: 2   RTEYCGLLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFTLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    +N  + TG +E+ A  + I++ AE  PLP+   +   E 
Sbjct: 62  ELRNEFCIQLTGVVRARPDNQVNKEMATGAVEVLATALTIINRAE--PLPLDANQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R RI + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRARITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLVRELWLEIHGVDL--GDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V AI   GG   +R   D   ++    G  GLAYI   
Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAAIRVPGGAQLSRKQIDEYAKFIEIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
             ++G      PVAK LN     A+  R   +DGD  FF A D  K  + A  A R  + 
Sbjct: 356 EKDNGLEGIQSPVAKFLNDGILSALLARTAAEDGDILFFGA-DSAKVVTDALGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++L I N N ++  W++DFP +E  + E  +   H+PFT P+      L+ N   +I A 
Sbjct: 415 RDLKITNENSWQPLWVIDFPMFE-EDGEGGLAAMHHPFTAPRDMSPTELEANPTAAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  E+    F  +GI +     +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHRGEMQQTVFRILGIDERQQREKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V   K
Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPSALEELSIAVVGKGK 588


>gi|315608745|ref|ZP_07883723.1| aspartate--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315249595|gb|EFU29606.1| aspartate--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 587

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 230/601 (38%), Positives = 341/601 (56%), Gaps = 26/601 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT +CG+L +SD G+ V L+GWV R R  GG+ F+D+RD YGITQ+V N   + A  E 
Sbjct: 2   YRTKTCGELRLSDAGTEVTLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEADNRALCEE 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + + G V  R ++  N N+ TG IE+    + +LS +   P  +    +  
Sbjct: 62  ANKLGREYCVQVKGRVSERQSK--NPNMDTGDIEIIVSALTVLSPSLTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LD+RR  + KN+  R R+   +R  + +  F+E  TPIL  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDIRRAAVRKNLELRHRMTILIRNFLDSRQFMEVETPILIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM +G DRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGVDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D+LN  E++ R +F+E            R+ + DA+RRYG+DKPD+R  +    
Sbjct: 239 SFVEQEDVLNIFEDMARHLFKEIRGVELPP--LERMKWHDAMRRYGSDKPDVRFGMEFVE 296

Query: 302 VTEHFV-HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359
           + E F     F VF +   +        +P       +   +  +   R Q G  GL +I
Sbjct: 297 LKEAFAGKGAFSVFDEAAYIGG----ICVPGCADYSRKQLNELTDFVKRPQVGAKGLVFI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-----PLKFCSFAA 414
            ++ D  G V     + K  +      I+  +  +DGD    ++GD      ++ CS   
Sbjct: 353 KYQAD--GTVK--SSIDKFYSPEVLAEIKQTMGAKDGDLVLILSGDNANKTRVQLCSL-- 406

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L     
Sbjct: 407 --RLEMGDRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDLPLLDEHP 464

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YD VCNG E+  G +R H + +  + F  +G + E  E +FG L  AF+ G P
Sbjct: 465 EQVRAVAYDFVCNGIEVGGGSLRIHDTRLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAP 524

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PH G+A G+DR V +L G  ++R+   FP + +  D+++ +P  +  +QL EL L++VE+
Sbjct: 525 PHAGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLDAPGPIDQKQLDELQLKLVES 584

Query: 595 P 595
           P
Sbjct: 585 P 585


>gi|170699192|ref|ZP_02890245.1| aspartyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170734087|ref|YP_001766034.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|171317330|ref|ZP_02906526.1| aspartyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|172061684|ref|YP_001809336.1| aspartyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|254247242|ref|ZP_04940563.1| Aspartyl-tRNA synthetase [Burkholderia cenocepacia PC184]
 gi|238688609|sp|B1JYI9|SYD_BURCC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238692860|sp|B1YWF2|SYD_BURA4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|124872018|gb|EAY63734.1| Aspartyl-tRNA synthetase [Burkholderia cenocepacia PC184]
 gi|169817329|gb|ACA91912.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|170135917|gb|EDT04192.1| aspartyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|171097529|gb|EDT42367.1| aspartyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171994201|gb|ACB65120.1| aspartyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 600

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/601 (38%), Positives = 339/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + I GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQIKGLVRNRPEGTVNAGLKSGKIEVLCHELNVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVQLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGGELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   +DGD  FF A D  K  + +  A       
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++E+ +   AH+PFT P+         D    
Sbjct: 420 SEFGKANGLVQAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+   E P
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQP 598

Query: 596 K 596
           K
Sbjct: 599 K 599


>gi|119774978|ref|YP_927718.1| aspartyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166225425|sp|A1S6P2|SYD_SHEAM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119767478|gb|ABM00049.1| aspartyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 591

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 230/610 (37%), Positives = 348/610 (57%), Gaps = 38/610 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG+IFLD+RD  G+ QVV +PD    F++A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVIFLDLRDREGLVQVVYDPDLPDVFDVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+ + + G+V  R    +N+ + TG+IE+  + + I++ A+ LPL +   +   E 
Sbjct: 62  SLRAEFCVQVKGVVRPRPDSQVNSQMKTGEIEVLGKALTIINAADPLPLSLDNHQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ + +R  M    F++  TPILT ++PEGARD+LVP
Sbjct: 122 ARLKYRYLDLRRPEMAQRLIFRAKVTSFVRRFMDGNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D ++ T E ++R +F E  N +    +F ++ +D+A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MTSDQVMETTERMIRNLFLELMNVDL--GDFPKMTWDEAMRRFGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VFS   +   G  V A+   GG   +R   D   ++    G  GLA++   
Sbjct: 299 DLLKAVEFAVFSGPANDEEG-RVAALRIPGGAELSRKQIDDYTKFVGIYGARGLAWMKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN    + I  R    DGD  F           F AD  N +A+
Sbjct: 358 NLAAGVEGIQSPVAKFLNEDIIKEIIARTKAADGDIIF-----------FGADKANVVAE 406

Query: 423 ELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQG----GMES 468
            +G +     E            W++DFP +E  + + +    H+PFT P+G     +E+
Sbjct: 407 SMGALRLKAGEDFKLLEGEWRPLWVVDFPMFE--KADGRFYAVHHPFTAPRGVTAAELEA 464

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
             G  +    +  YD+V NG E+  G +R H  ++    F  +GI  E  + +FG L  A
Sbjct: 465 SPGKAV----SDAYDMVLNGVELGGGSVRIHNGDMQSTVFRILGIDDEEAKEKFGFLLDA 520

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
            + G PPH G+A G+DR+VML+ GA ++R+V  FP +      L  +P   + +QL ELG
Sbjct: 521 LRFGTPPHAGLAFGLDRLVMLMTGASSIRDVMAFPKTTTAACPLTNAPGHANPDQLVELG 580

Query: 589 LRIV-ENPKK 597
           + ++ + PK+
Sbjct: 581 IAVLPKEPKQ 590


>gi|15641179|ref|NP_230811.1| aspartyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|147674215|ref|YP_001216685.1| aspartyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153819872|ref|ZP_01972539.1| aspartyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|227081338|ref|YP_002809889.1| aspartyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229505240|ref|ZP_04394750.1| aspartyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229511090|ref|ZP_04400569.1| aspartyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229518210|ref|ZP_04407654.1| aspartyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229608259|ref|YP_002878907.1| aspartyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254848293|ref|ZP_05237643.1| aspartyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255745577|ref|ZP_05419525.1| aspartyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262158349|ref|ZP_06029465.1| aspartyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|262170162|ref|ZP_06037850.1| aspartyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|298498730|ref|ZP_07008537.1| aspartyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|24212424|sp|Q9KSU0|SYD_VIBCH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|172047395|sp|A5F263|SYD_VIBC3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781761|sp|C3LLL2|SYD_VIBCM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|9655641|gb|AAF94325.1| aspartyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|126509582|gb|EAZ72176.1| aspartyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|146316098|gb|ABQ20637.1| aspartyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227009226|gb|ACP05438.1| aspartyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227013032|gb|ACP09242.1| aspartyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229344925|gb|EEO09899.1| aspartyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229351055|gb|EEO15996.1| aspartyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357463|gb|EEO22380.1| aspartyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229370914|gb|ACQ61337.1| aspartyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254843998|gb|EET22412.1| aspartyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255736652|gb|EET92049.1| aspartyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262021331|gb|EEY40044.1| aspartyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262029790|gb|EEY48438.1| aspartyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|297543063|gb|EFH79113.1| aspartyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 591

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALCIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK L     +AI  R   Q GD   F   D  K  + A  A R    
Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +ELGI N + +   W++DFP +E +++E  +   H+PFT P     E LK N   ++ + 
Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEAL-SN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +
Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583


>gi|262402476|ref|ZP_06079037.1| aspartyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262351258|gb|EEZ00391.1| aspartyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 591

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK L     +AI  R  +Q GD   F   D  K  + A  A R    
Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQVQTGDIILF-GADSAKVVAEALGALRLKAG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +ELGI N + +   W++DFP +E  ++E  +   H+PFT P     E LK N   ++ + 
Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-GDDEGNVAAMHHPFTSPLNLTPEQLKANPEEAL-SN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +
Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583


>gi|162447681|ref|YP_001620813.1| aspartyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|161985788|gb|ABX81437.1| aspartyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 567

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/588 (36%), Positives = 339/588 (57%), Gaps = 25/588 (4%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H   +L + ++   V L GWV +VR  GG+IF+D+RD YGITQ+V  P++A +E A  V
Sbjct: 5   SHHNNELTIKNLNETVFLKGWVSKVRNLGGLIFMDLRDQYGITQLVVRPNTALYERASQV 64

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           RSE+V+ + G+V+ R  E+ N  + TG IE+   ++ IL+ A   P+ +  +    E +R
Sbjct: 65  RSEYVVEVKGIVIER--ESKNKFMTTGDIEIDVTELNILNTAMTTPITISEQDNISEEVR 122

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            KYR+LDLR+ T    +++R++I  S+R  ++  NF+E  TP L  ++PEGA++F+VPSR
Sbjct: 123 LKYRYLDLRKPTSKNYLLQRSKITQSIRNSLLNNNFLELETPYLVKTTPEGAKEFIVPSR 182

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           +  G  YAL Q+PQ +KQL M SGF++YFQ A CFRDED R+DR   EF Q+D+E SF+ 
Sbjct: 183 LYHGEGYALAQSPQMFKQLYMVSGFEKYFQFARCFRDEDLRADR-QLEFTQIDIEASFIT 241

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           Q+DI+   E ++  +F++   G  +     R+ Y DA   YG+DKPDLR  + + ++T+ 
Sbjct: 242 QEDIMKLGEEMMSNMFKDIL-GKELKLPIARLTYQDAFDMYGSDKPDLRYELKIEDLTDK 300

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
                  +F    S+      + +P       R + D++ E  +      LAY+     E
Sbjct: 301 LSTYHVPLFESKASLRG----FTLP-NNALFTRKYFDKLTEIVKKNHGDTLAYV---KHE 352

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G ++G        N+V            DG + F + G      +     R  +A++LG
Sbjct: 353 GGQLSGSVSKFFDENVV-----------ADGYTLFIVPGTYEGATNACGALRKELAKDLG 401

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
            I+       WI+DFP +E++EE++++   H+PFT P+  +E  + N   ++ A  YDLV
Sbjct: 402 YIDETLESLVWIVDFPLFEYSEEDQRLYARHHPFTAPK-DLEDFRNNPKDTL-AKAYDLV 459

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
            NG+E+  G +R +  EV  + F  +G ++E + N+FG    A + G PPHGGIA G+DR
Sbjct: 460 WNGYEVGGGSMRIYNQEVQNEMFEKLGFTQEEIRNKFGFFIDALKYGTPPHGGIAFGLDR 519

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           IVML     N+R+V  FP +Q+  D++M SPS +   QL +LGL++++
Sbjct: 520 IVMLATKTDNIRDVIAFPKTQSARDIMMESPSPIDKLQLEDLGLKVIK 567


>gi|271500736|ref|YP_003333761.1| aspartyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270344291|gb|ACZ77056.1| aspartyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 596

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 237/596 (39%), Positives = 345/596 (57%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F +A 
Sbjct: 2   RTEYCGLLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQEAFNLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    IN ++ TG++E+ A  + I++ AE  PLP+   +   E 
Sbjct: 62  ELRNEFCIQLTGVVRARPDTQINKDMATGEVEVLATALTIINRAE--PLPLDSNQNNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R RI + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRARITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++      +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLVRELWLGVKGVDL--GDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V AI   GG   +R   D   ++    G  GLAYI   
Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAAIRVPGGAQLSRKQIDEYAKFIEIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK LN     A+  R    DGD  FF A D  K  + A  A R  + 
Sbjct: 356 EKANGLEGIQSPVAKFLNDGILAALLERTAADDGDILFFGA-DSAKVVTDALGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480
           ++L I N N ++  W++DFP +E ++ E  +   H+PFT P+    S LK N   +I A 
Sbjct: 415 RDLKITNENSWQPLWVIDFPMFE-DDGEGGLAAMHHPFTAPRDMSPSELKANPTAAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  E+    F  +GI ++    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNGEMQQTVFRILGIDEQQQREKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V   K
Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPSALEELSIAVVGKGK 588


>gi|259908215|ref|YP_002648571.1| aspartyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224963837|emb|CAX55339.1| Aspartyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283478145|emb|CAY74061.1| aspS [Erwinia pyrifoliae DSM 12163]
          Length = 595

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 236/596 (39%), Positives = 346/596 (58%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG + +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F+ A 
Sbjct: 2   RTEYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDHQQAFKQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N ++ TG+IE+ A ++ I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIRIVGTVRARDDKNKNGDMATGEIEVFATELTIINRSE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMANRLKARAKITSLVRRFMDDEGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +  + +  +  F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREIMERLVRNLWLDVKSVDLGA--FPSMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V A+   GG G +R   D    +    G  GLAYI   
Sbjct: 297 DLLKDLEFKVFSGPANDAKG-RVAALRVPGGAGLSRKQIDDYTRFIEIYGAKGLAYIKIN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK LN    +AI  R    DGD  FF A D  K  + A  A R  + 
Sbjct: 356 ERAKGLEGITSPVAKFLNADIVDAILQRTAALDGDLIFFGA-DRAKVVADALGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++L I N + +   W++DFP +E ++ E+ +   H+PFT P+    E LK     +I A 
Sbjct: 415 RDLKITNESAWAPLWVVDFPLFE-DDGEEGLTAMHHPFTAPKDMSPEQLKNAPETAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  ++    F  +GI++     +FG L  A + G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHNGQMQQTVFGILGITEHEQREKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VMLL G  N+R+V  FP +     L+  +P+  +   L ELG+ +V+  K
Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPNFANPASLTELGIEVVKKSK 588


>gi|331269255|ref|YP_004395747.1| aspartyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125805|gb|AEB75750.1| aspartyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 591

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 225/591 (38%), Positives = 344/591 (58%), Gaps = 15/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  S +G    + GWV R R  GG++F+D+RD  GI QVV   +     FE A
Sbjct: 10  RTVMCGELRESHIGQKHVVMGWVQRKRNLGGLVFVDLRDREGILQVVFGEEINKEAFEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             V+ E+ + ++G ++ R  ++ N  + TG +EL  Q I+ILS +E  P+ +  + +  E
Sbjct: 70  DLVKPEYCIAVEGELVKR--QSPNETLPTGMVELKGQNIKILSESETPPIYIKEDLDTDE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  +      R +    +R  +    F+E  TP+LT S+PEGARD+LV
Sbjct: 128 AVRLKYRYLDLRRPDMQNIFKVRHKTAKVIRDFLDQNGFLEMETPMLTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FYALPQ+PQ +KQLLM SG+DRYFQI  CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYPGMFYALPQSPQLFKQLLMVSGYDRYFQITKCFRDEDLRANRQP-EFTQVDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +D+++  E +++ VF+E ++ + V     RI Y +A+ +YG+DKPDLR  + ++++
Sbjct: 247 FVDMEDVISLNERLIKKVFKEIADVD-VKLPIQRITYKEAMDKYGSDKPDLRFGMEINDI 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           T+     +F+VF    ++  G  V AI A    G  R   D++ E+ ++    GLA+I +
Sbjct: 306 TDAVKDVDFKVFKD--AIENGGSVRAIKAPNCAGMGRKQIDKLGEFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE  +     P++K L      ++  +LD + GD    +A             R  +A
Sbjct: 364 KEDEIKS-----PISKFLQEEGMNSVIEKLDAKVGDLILIVADKDSVVLQALGALRLEMA 418

Query: 422 QELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           + L I+  N  F F W+ +FP   +NEEE +    H+PFTMP         +D   ++A 
Sbjct: 419 KRLEILKDNKEFRFAWVTEFPLLSYNEEENRYQAEHHPFTMPMDEDIEYLESDPGRVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F+ +G + E    RFG L  AF+ G PPHGG+A
Sbjct: 479 AYDIVLNGEELGGGSIRIHDTKLQEKMFNVLGFTSESAWERFGFLLEAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G DR++M L G +N+++V  FP +QN    L  +P+ V  +QL ELG+ +
Sbjct: 539 YGFDRMIMFLAGTENIKDVIAFPKNQNAYCPLTEAPNVVDEKQLGELGISL 589


>gi|107023660|ref|YP_621987.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116690745|ref|YP_836368.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|123244665|sp|Q1BTP1|SYD_BURCA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225325|sp|A0KAE8|SYD_BURCH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|105893849|gb|ABF77014.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116648834|gb|ABK09475.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 600

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/601 (38%), Positives = 339/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + I GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQIKGLVRNRPDGTVNAGLKSGRIEVLCHELNVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVQLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGGELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   +DGD  FF A D  K  + +  A       
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++E+ +   AH+PFT P+         D    
Sbjct: 420 SEFGKANGLVQAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+   E P
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQP 598

Query: 596 K 596
           K
Sbjct: 599 K 599


>gi|330818289|ref|YP_004361994.1| Aspartyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327370682|gb|AEA62038.1| Aspartyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 600

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/600 (39%), Positives = 340/600 (56%), Gaps = 12/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRGRPDGTINAGLKSGKIEVLCHELTVLNPSVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPHMQNNLRLRYRVAIEVRKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF++ + G  +  +F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEEMIRHVFKK-TIGVELDASFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G        KG    R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVEFKVFSTPANSKDGRVAALRVPKGSELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422
              G      P+ K+L+  +  AI  R   QDGD  FF A D  K  + +  A R  I  
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            E G  N    + ++  W++DFP +E++E+E +   AH+PFT P+         D     
Sbjct: 420 SEFGKANGLVESGWKPLWVIDFPMFEYDEDEVRYVAAHHPFTSPKDEHLEYLETDPGRCL 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R    +V  + F  + I  E  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWEIGGGSVRIFQEDVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENPK 596
           IA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QL+EL +R+   E PK
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLKELHIRLRQPEAPK 599


>gi|170024382|ref|YP_001720887.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|238688453|sp|B1JLL5|SYD_YERPY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169750916|gb|ACA68434.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 598

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/592 (39%), Positives = 343/592 (57%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A FE A 
Sbjct: 2   RTEYCGQLNLSHVGQSVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAFEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSE--PLPLDSNQINSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKSRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MSADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
                 EF+VFS   +   G  V A+   GG   +R   D   ++    G  GLA++   
Sbjct: 297 SLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQLSRKQIDEYGQFVGIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK L+    +AI V    + GD  FF A D  K  + A  A R  + 
Sbjct: 356 DRAAGLEGVQSPIAKFLSSEVLDAILVATQAESGDILFFGA-DSYKIVTDAMGALRLKVG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++L +     +   W++DFP +E ++ E  +   H+PFT P+    E L      +I A 
Sbjct: 415 RDLELTRLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKDMSPEQLAAAPTTAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI+++    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHRTEMQQTVFGILGITEDEQREKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V
Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584


>gi|289661892|ref|ZP_06483473.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 588

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 231/602 (38%), Positives = 349/602 (57%), Gaps = 23/602 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + TG++E+ A +I IL+ A   PLP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRTGKVEVIATRISILNKAA--PLPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RR+G+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRFGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + +V E    SEF VF+   +   G  V A+   GG G +R   D     A   G  GLA
Sbjct: 296 LVDVAELVKSSEFPVFTAAANDADG-RVAALRIPGGAGLSRKQIDEYAAHAAKYGAKGLA 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L E+G V+   P+AK  +     A+   +   +GD  FF AG   K   F    R
Sbjct: 355 YI--KLSETGEVS--SPIAKFFSEEAFAALIKHVGAGNGDIVFFGAGGYTKVSDFMGALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476
               +E  ++  + +   W+ DFP +EW++E ++    H+PFT P    +  L+ N   +
Sbjct: 411 LKAGKEFNLL-ADGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARTA 469

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPH
Sbjct: 470 V-SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   PK
Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV--RPK 586

Query: 597 KI 598
           ++
Sbjct: 587 QV 588


>gi|314923566|gb|EFS87397.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
          Length = 606

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 234/603 (38%), Positives = 336/603 (55%), Gaps = 25/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R H  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RPHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++    G  +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKII--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF       P      +P       R F D   EWAR++G  GLAYI   + 
Sbjct: 300 FFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TIS 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G  A  GPVAK+++      I  +   + GD+ FF AG           AR  I +  
Sbjct: 352 DEG--APEGPVAKNISEEEKAGIAEKAGAKPGDAIFFAAGSKTSCQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P ++  +E E   D A         H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G  +   
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587

Query: 595 PKK 597
           PKK
Sbjct: 588 PKK 590


>gi|251789862|ref|YP_003004583.1| aspartyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247538483|gb|ACT07104.1| aspartyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 596

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 236/596 (39%), Positives = 343/596 (57%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F++A 
Sbjct: 2   RTEYCGLLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    IN  + TG++E+ A  + I++ AE  PLP+   +   E 
Sbjct: 62  ELRNEFCIQLTGVVRARPDNQINKEMATGEVEVLATALTIINRAE--PLPLDSNQNNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R RI + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRARITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLVRELWLDVKGVDL--GDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V AI   GG   +R   D   ++    G  GLAYI   
Sbjct: 297 DLLKDVDFKVFSSPAN-DPKGRVAAIRVPGGAQLSRKQIDEYAKFIEIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK LN      +  R    DGD  FF A D  K  + A  A R  + 
Sbjct: 356 EKAKGLEGIQSPVAKFLNDGILADLLARTAADDGDILFFGA-DSAKVVTDALGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480
           ++L I N N ++  W++DFP +E  + E  +   H+PFT P+    S LK N   +I A 
Sbjct: 415 RDLKITNENSWQPLWVIDFPMFE-EDGEGGLAAMHHPFTAPRDMSPSELKANPTAAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  E+    F  +GI ++    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNGEMQQTVFRILGIDEQQQREKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V   K
Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPSALEELSIAVVGKGK 588


>gi|291295943|ref|YP_003507341.1| aspartyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470902|gb|ADD28321.1| aspartyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 580

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 240/593 (40%), Positives = 346/593 (58%), Gaps = 25/593 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT  CG+L     G  V L GWV+R R  GG+IF+D+RD  G+ QVV NP++ACF  A  
Sbjct: 3   RTLYCGELREHHAGQTVVLEGWVNRRRNLGGLIFIDLRDREGLAQVVVNPEAACFSEADR 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----FGERE- 119
           VR+EWV+ ++G V  R A+ +NA + TG +E+ A++IE+L+ A+  P P+     GE + 
Sbjct: 63  VRAEWVIRVEGSVRLRPADQLNAKLATGAVEVIAERIEVLAEAKTPPFPIDAGWRGEDDP 122

Query: 120 -YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R + R +DLRR  LH N+  R +++ ++   + A  FI   TP LT S+PEGAR
Sbjct: 123 HVGEEVRLRNRVVDLRRRRLHHNLRLRHKVVAAIYRFLDAHGFISVETPYLTRSTPEGAR 182

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR+  G FYALPQ+PQ +KQ+LM +G+DRYFQIA CFRDED R+DR P +F QLD
Sbjct: 183 DFLVPSRLEPGHFYALPQSPQLFKQMLMVAGYDRYFQIARCFRDEDLRADRQP-DFTQLD 241

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSFV Q+DI+   E +   +  E + G      F R+ Y + + RYG+DKPDLR  + 
Sbjct: 242 MEMSFVTQEDIIALNEELAAFILRE-TLGQEPPLPFPRLTYTEVMNRYGSDKPDLRFGLE 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +VTE F   EFR F+       G EV       G  +R   + +   A+++G  GLA 
Sbjct: 301 LQDVTEAFRGGEFRAFA-------GAEVVKALVVPGLLSRREIEALEATAKTKGAAGLA- 352

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
             W   E+G ++G   +A+++     E    +L + +G +   +AG   K        R 
Sbjct: 353 --WARFENGALSGG--IARYIPAHLPE----QLGLTEGHTLLLVAGPWRKTVESLGAVRL 404

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++LG+I    F+F W++DFP  EW+EE  +  + H+PFT P      L   D   ++
Sbjct: 405 ELGRQLGLIEPG-FKFLWVVDFPLLEWDEEAGRWTYMHHPFTSPNLEDLHLLDTDPGRVR 463

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+ YD V NG EI  G IR H  ++  + F+ +GI  E  + +FG L  A   G PPHGG
Sbjct: 464 AYAYDFVLNGSEIGGGSIRIHRRDLQERMFALLGIGPEEAQQKFGFLLEALSYGAPPHGG 523

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IA G+DR V  L G +++REV  FP ++   + L G+P+ V   QL  +GL +
Sbjct: 524 IAWGLDRFVAHLAGEESIREVIAFPKNKEGKETLTGAPAPVDEAQLAAVGLAV 576


>gi|77163835|ref|YP_342360.1| aspartyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254435850|ref|ZP_05049357.1| aspartyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|97196746|sp|Q3JEB6|SYD_NITOC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|76882149|gb|ABA56830.1| aspartyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207088961|gb|EDZ66233.1| aspartyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 595

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/590 (38%), Positives = 341/590 (57%), Gaps = 7/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H CG+L  + +   V L GWV+R R HGG+IF+D+RD  G+ Q+V +P+ +   F  A
Sbjct: 2   RSHYCGELSEAHLDQSVTLCGWVNRRRDHGGVIFIDLRDREGLIQLVFDPEYSPESFRHA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +RSE+VL + G V  R   T N ++ TGQ+E+  Q++ +L+ +E  P PV  + E  E
Sbjct: 62  EQIRSEYVLQVKGRVQHRPEGTENPDLKTGQVEVLGQELILLNASETPPFPVDEKLEVGE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR +YR++DLRR    + +  R+ II  +R  +    F++  TPILT S+PEGARDFLV
Sbjct: 122 DIRLRYRYIDLRRPESLQRLRFRSAIIRQLRKFLDERGFLDIDTPILTQSTPEGARDFLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + G F+ALPQ+PQ +KQLLM +G DRY+Q+  CFRDED R+DR P EF QLD+E S
Sbjct: 182 PSRTHPGQFFALPQSPQLFKQLLMVAGVDRYYQVVRCFRDEDLRADRQP-EFTQLDIEAS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ ++ ++  ME + + +F        +   F+R+ Y +A+  +G DKPDLR P+ +  V
Sbjct: 241 FLHEETLMALMEEMFKELFATVLE-VPLHTPFVRMPYAEALACFGLDKPDLRIPLRLVEV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     +F+VF++      G  V A+   GGG  +R   +   ++    G  GLAYI  
Sbjct: 300 GDLMKTVDFKVFAQPAQDRDG-RVAALRLPGGGKLSRKEIEEYTQFVAIYGAKGLAYIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+ K L      A+  R + ++GD  FF A             R  + 
Sbjct: 359 VERSRGREGLQSPILKFLPDEVIGAMLERTEAENGDIVFFGADKASIVNESLGALRVKLG 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            + G++  + +   W++DFP +EW+E++ +    H+PFT P+    SL   +  + ++  
Sbjct: 419 HDHGLVE-HGWSPLWVIDFPMFEWDEDDHRWHALHHPFTSPKEEDLSLLEQNPGACRSRA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR   S+V  Q F  +GI  E  +++FG L  A + G PPHGGIA 
Sbjct: 478 YDLVLNGTEVGGGSIRISQSQVQSQVFRLLGIGDEEAQDKFGFLLDALKYGCPPHGGIAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VML+ G+ ++REV  FP +Q     L G+P  V+  QLRELG+ +
Sbjct: 538 GLDRLVMLMTGSASIREVIPFPKTQTAACPLTGAPGQVAEAQLRELGIGV 587


>gi|171743322|ref|ZP_02919129.1| hypothetical protein BIFDEN_02453 [Bifidobacterium dentium ATCC
           27678]
 gi|306823267|ref|ZP_07456643.1| aspartate--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309801923|ref|ZP_07696038.1| aspartate--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|171278936|gb|EDT46597.1| hypothetical protein BIFDEN_02453 [Bifidobacterium dentium ATCC
           27678]
 gi|304553899|gb|EFM41810.1| aspartate--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308221479|gb|EFO77776.1| aspartate--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 599

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 230/605 (38%), Positives = 346/605 (57%), Gaps = 39/605 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++    VG  V L+GWV R R HGG+ F+D+RD+ G+ QVV   +    E+A+
Sbjct: 6   YRTHHATEVTEELVGQKVTLAGWVDRRRDHGGVAFIDLRDNTGLVQVVIYDE----EMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117
            +RSE+V+ + G V  R     N ++ TG+IE+ A+ IE+L+ ++ LP  V        E
Sbjct: 62  PLRSEFVIRVIGEVRLRPDGNENDHLATGKIEVVAETIEVLAKSDALPFQVSTALENESE 121

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR ++  N+  R+++  + R  +    F E  TP +  S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSQMSKAARHALEEMGFEEVETPTMIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294
           LDMEM+FV+Q+D++   E V+  +++  S G  +     RI + +A+ +YG+DKPDLR  
Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYEIQLPIQRITWQEAMDKYGSDKPDLRFG 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353
           NP++   +T++F ++ FRVF           V A+  KGG    R   D   +WA+ +G 
Sbjct: 299 NPLV--ELTDYFKNTPFRVFQAPY-------VGAVLFKGGAATPRRQFDAWQDWAKQRGA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAY+ +   E+G +   GPVAK+L+      ++  +  +DGD+ FF AG         
Sbjct: 350 KGLAYVVFA--ENGELK--GPVAKNLSEEERNGLKEAVGAEDGDAVFFAAGRRTSAQELL 405

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464
              R  +A   G++  + F F W++DFP ++  ++    D A         H+PFTMP  
Sbjct: 406 GAVRVELADRAGLLKPDDFAFTWVVDFPLFKTTDDPDDDDVAVGHSKWTSMHHPFTMPSK 465

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D     +  YD+VCNG E+  G +R H  ++  +    +GI+ E   ++FG 
Sbjct: 466 DWIDTFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGITPEEAADKFGF 525

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPH GIA G DR   +L GA ++R+V  FP +    D L G+P+ +S EQ 
Sbjct: 526 LLEAFKYGAPPHAGIALGWDRTAAILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585

Query: 585 RELGL 589
            E G+
Sbjct: 586 AETGV 590


>gi|256420263|ref|YP_003120916.1| aspartyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256035171|gb|ACU58715.1| aspartyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 582

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 231/597 (38%), Positives = 346/597 (57%), Gaps = 23/597 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH+CG+L +   G+ V LSGW+  +R  G I F+D+RD YGITQ++          A+
Sbjct: 2   YRTHTCGELRLEHQGTQVSLSGWIQTIRKFGSITFVDLRDRYGITQLLFGESFNDQLDAQ 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +  E+V+   G V  RS +  N NI TG IE++  +  IL+ A+  P  V  + +  + 
Sbjct: 62  PLGREFVIQAKGTVTERSNK--NPNIPTGDIEITISEFTILNAAKTPPFTVQDDTDGGDE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR+ + +N+  R R+  S R  + +  F++  TP L  S+PEGARDF+VP
Sbjct: 120 LRMKYRYLDLRRNIVKQNLELRYRVNRSARNYLDSRGFMDIETPFLIKSTPEGARDFVVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+N   FYALPQ+PQ +KQLLM SG+DRY+QI  CFRDED R+DR P EF Q+D EMSF
Sbjct: 180 SRMNPNEFYALPQSPQTFKQLLMVSGYDRYYQIVKCFRDEDLRADRQP-EFTQIDCEMSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+Q+DILNT EN+++ +F E   G +  + F R+ +DDA+  YG DKPD+R  + + N+ 
Sbjct: 239 VDQEDILNTFENMMKHIFMEIK-GISFEDAFPRMTWDDAMEFYGNDKPDIRFDMKLVNMN 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQ--GQPGLAYIF 360
           +    + F+VF      +    V AI AKG     R   D + EW +    G  GL  I+
Sbjct: 298 DTAKGANFKVF------DDAELVVAICAKGCAEYTRKQLDELTEWVKRPQIGMSGL--IY 349

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R +  G +     V K  +    +    +   + GD    +AG   +     ++ R  +
Sbjct: 350 ARYNADGTIK--SSVDKFFDEEKLKGWAAKCQAEPGDLILVLAGKEERTRKAMSELRLEM 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG-NDL---LS 476
            + LG+ + N F+  W++DFP +E+ EEE +    H+PFT P+   E ++  NDL     
Sbjct: 408 GERLGLRDKNVFKPLWVIDFPLFEYAEEENRWVARHHPFTSPKP--EHIEWMNDLSKYAD 465

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           IKA  YD+V NG E+  G IR    ++  + F+ +G+S E   ++FG L  AF+ G PPH
Sbjct: 466 IKANAYDIVLNGTEVGGGSIRIFQRDLQEKMFAALGMSPEEANHKFGFLLGAFEYGAPPH 525

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GGIA G DR+  LL G++ +R+   FP + +  D+++ +PS +   QL EL + +V+
Sbjct: 526 GGIAFGFDRLCSLLGGSETIRDFIAFPKNNSGRDVMLDAPSAIDQAQLNELKISLVK 582


>gi|86134611|ref|ZP_01053193.1| Aspartyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821474|gb|EAQ42621.1| Aspartyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 584

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 225/592 (38%), Positives = 341/592 (57%), Gaps = 17/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61
           YR+HSCG L  S + + V L+GWV + R  G ++++D+RD YGITQ++ + +    +I  
Sbjct: 2   YRSHSCGALRASHINTEVTLAGWVQKSRDKGFMVWVDLRDRYGITQLIFDEERTSKDIIE 61

Query: 62  -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AKS+  E+V+ + G V+ R  E+ N  + TG++E+   ++EIL+ A+  P  +  + + 
Sbjct: 62  KAKSLGREFVIQVKGTVIER--ESKNDRLATGEVEVLVTELEILNEAKLPPFTIEDKTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LD+RR+ +  +++ R ++   +R  +  + FIE  TP L  S+PEGARDF
Sbjct: 120 GEDIRMKYRYLDIRRNPVKDSLIFRHKVTMEVRKYLSDQEFIEVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DILN  E + R + +E  NG  V + F R+ +DDA+R YG DKPD+R  +   
Sbjct: 239 MAFVEQEDILNIFEGLTRHLLKEI-NGVEV-DKFPRMLFDDAMRLYGNDKPDIRFGMEFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
            +     H +F+VF      N    V  I   GG    R   D + +W +      L  I
Sbjct: 297 ELNAVTQHKDFKVF------NDAELVIGIAVPGGNAYTRKEIDNIIKWVKRPQVGALGMI 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R++E G+      V K  N  +          + GD    ++G+  K  +  +  R  
Sbjct: 351 YCRVNEDGSFK--SSVDKFYNQEDLAKWVEVTGAKPGDLVCVLSGETNKVRAQMSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ LG+ +   F   W++DFP  E +EE       H+PFT P+ G   L  +    +KA
Sbjct: 409 LAERLGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDSKPGEVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H          ++G S+E  + +FG L  AF+ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKATQATMLKHLGFSEEEAKAQFGFLMDAFEYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+V +L G + +R+   FP + +  D+++ +P+ +  EQL+EL L++
Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAFIDDEQLQELSLKL 580


>gi|45441698|ref|NP_993237.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|45436560|gb|AAS62114.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
          Length = 598

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/592 (39%), Positives = 343/592 (57%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A FE A 
Sbjct: 2   RTEYCGQLNLSHVGPSVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAFEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSE--PLPLDSNQINSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKSRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MSADQVREVMEKLVRELWQETKGVDL--GDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
                 EF+VFS   +   G  V A+   GG   +R   D   ++    G  GLA++   
Sbjct: 297 SLVKDVEFKVFSGPANDAKG-RVAALRVPGGAQLSRKQIDEYGQFVGIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK L+    +AI V    + GD  FF A D  K  + A  A R  + 
Sbjct: 356 DRAAGLEGVQSPIAKFLSAEVLDAILVATQAESGDILFFGA-DSYKIVTDAMGALRLKVG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++L +     +   W++DFP +E ++ E  +   H+PFT P+    E L      +I A 
Sbjct: 415 RDLELTRLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKDMSPEQLAAAPTTAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI+++    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHRTEMQQTVFGILGITEDEQREKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V
Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV 584


>gi|21232460|ref|NP_638377.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767456|ref|YP_242218.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|24212399|sp|Q8P6E0|SYD_XANCP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|81306564|sp|Q4UXM5|SYD_XANC8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|21114243|gb|AAM42301.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66572788|gb|AAY48198.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 588

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 233/601 (38%), Positives = 344/601 (57%), Gaps = 23/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPAEGDANSAEV 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  I TG++E+ A +I IL+ A   PLP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKIRTGKVEVIATRITILNKAA--PLPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEDTRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  +   ++  F R+ + +A+RRYG+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVE-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + +V E    SEF VF+   +   G  V A+   GG   +R   D     A   G  GLA
Sbjct: 296 LVDVAELVKTSEFPVFAAAANDADG-RVAALRIPGGATLSRKQIDDYAAHAAKYGAKGLA 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y   +L E+G V+   P+AK        A+   +   +GD  FF AG   K   F    R
Sbjct: 355 Y--SKLSETGEVS--SPIAKFFGEEAFAALLAHVGAANGDIVFFGAGSYNKVSDFMGALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476
               ++ G++    +   W+ DFP +EW+EE ++    H+PFT P    +  L+ N   +
Sbjct: 411 LKAGKDFGLVAAG-WAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTA 469

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPH
Sbjct: 470 V-SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ EQL E+ +++   PK
Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAAEQLAEVHVQV--RPK 586

Query: 597 K 597
           +
Sbjct: 587 Q 587


>gi|255082085|ref|XP_002508261.1| predicted protein [Micromonas sp. RCC299]
 gi|226523537|gb|ACO69519.1| predicted protein [Micromonas sp. RCC299]
          Length = 666

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 224/593 (37%), Positives = 337/593 (56%), Gaps = 16/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R  +CG L   D G  V L GWV + R  GGI+F D+RDH G  QVV++ D+     +  
Sbjct: 68  RDQTCGTLREQDEGRTVTLCGWVDKQRDMGGIVFADVRDHTGFVQVVSDADTPKEATDAL 127

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFG----- 116
            ++R+EWV+C+ G V  R+A   N  + TG +E++A K+ +L +VA+ LP  + G     
Sbjct: 128 AAMRAEWVVCVTGRVKKRTAP--NDKVPTGAVEVAADKVTVLNTVAKSLPFSISGAPEGD 185

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPE 175
           + E  E +R K R LDLRR  + +N+  R + + ++R  +    +F+E  TPILT S+PE
Sbjct: 186 DDELREEVRLKNRVLDLRRPQMVRNLRLRAKTVRALRKVLEDTHDFLEVETPILTRSTPE 245

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARD+LVPSR+  G+ +ALPQ+PQ +KQ+LM +G DRY+Q+A CFRDED R+DR P EF 
Sbjct: 246 GARDYLVPSRLQPGACFALPQSPQLFKQMLMVAGADRYYQVARCFRDEDLRADRQP-EFT 304

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           QLD+EMSF + D ILN  E+++   F+E ++ + +   F R+ Y +A+ +YG+DKPD+R 
Sbjct: 305 QLDIEMSFTDMDGILNLGEDLMCAAFKEGADVD-LPRPFRRMTYAEAMSKYGSDKPDVRY 363

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
            + M  + +    +EF++F+  +      +  A+P      N     + + +  +     
Sbjct: 364 GLEMAELADVVAGTEFKLFAGAVEAGGVVKAIAVPQGSRISNSRLKPKGDVFNEAIAGGA 423

Query: 356 LAYIFWRLDESG-NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
               F R+ E G  + G   + + L  V  E +  R     GD   F AGD         
Sbjct: 424 GGLAFARVGEDGVTLEGGKALCEGLQPV-AEKLIARCGAGAGDLLLFGAGDEGTVNKAMD 482

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  +A+ L ++        WI DFP +EWNE+E +++  H+PFT P    +   G D+
Sbjct: 483 RVRQFVAKTLDMVPEGQHAVLWITDFPMFEWNEDENRLEALHHPFTAPNQ-EDVANGGDI 541

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
              +A  YDLV NG E+  G +R +  +V  + F  +G+ KE  E +FG L  AFQ G P
Sbjct: 542 KQARAIAYDLVYNGVEVGGGSLRIYRRDVQEKVFDAIGLGKEEAEEKFGYLMEAFQFGAP 601

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           PHGG+A G+DR+VM+L GAK++R+V  FP +     LL  +P  VS  Q+ EL
Sbjct: 602 PHGGMAFGLDRLVMMLAGAKSIRDVIAFPKTATAQCLLTAAPGDVSDSQMAEL 654


>gi|256819652|ref|YP_003140931.1| aspartyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581235|gb|ACU92370.1| aspartyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 582

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/595 (37%), Positives = 344/595 (57%), Gaps = 21/595 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60
           YRTH+CG+L +S     V LSGWV R+R  G +I++D+RD YGITQ++ +    D   FE
Sbjct: 2   YRTHTCGELRLSHEKQQVTLSGWVQRIRNKGFMIWVDLRDRYGITQLIFDEERTDKTVFE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AK++  E V+ I G+V+ R  E  NANI TG++E+    + +L+ +E  P  +    + 
Sbjct: 62  QAKTLSREDVIQIQGIVIKR--EAANANIPTGEVEILVTALTLLNHSELPPFTIEDNTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR  +  N++ R ++   +R  +  + FIE  TP+L  S+PEGARDF
Sbjct: 120 GEDLRMKYRYLDIRRTPVRDNLIFRHKVGIMVRNYLSGQGFIEVETPVLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNPGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+++T E + + + +E    +  +  F R+ Y +A++ YG DKPD+R  +   
Sbjct: 239 MSFVEQEDVISTFEGLAKHLLKELKGLDFGA--FPRMTYAEAMKTYGNDKPDIRFGMKFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357
            + +   H +F+VF      N    V  I   G     R   D + EW +    G  G+ 
Sbjct: 297 ELNDLAQHRDFKVF------NEAELVVGIAVPGANSYTRKEIDALVEWVKRPQVGASGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  + +E G+      V K  N  + +A   R   + GD    ++G   K     +  R
Sbjct: 351 YV--KCNEDGSFK--SSVDKFYNEDDLKAWAERTGAKAGDLICILSGKANKVRGQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ LG+ N + +   W++DFP  EW+EEE++    H+PFT P+     L  ++   +
Sbjct: 407 MELAERLGLRNPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDSNPGEV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG E+  G IR    E+  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 467 RANAYDLVLNGNEVGGGSIRIFNQELQAKMFQLLGFTPEQAQAQFGFLMNAFKYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+A G DR+V LL G + +R+   FP + +  D+++ +PS +   QL+EL +++V
Sbjct: 527 GLAFGFDRLVALLGGQETIRDFIAFPKNNSGRDVMIDAPSPIDEAQLKELSIQLV 581


>gi|308049720|ref|YP_003913286.1| aspartyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307631910|gb|ADN76212.1| aspartyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 588

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 230/597 (38%), Positives = 352/597 (58%), Gaps = 17/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG +  + +G  V L GWV+R R  GG+IFLD+RD  GI QVV +PD    FE A 
Sbjct: 2   RSHYCGHVTETLIGQEVTLVGWVNRRRDLGGVIFLDLRDREGIVQVVYDPDLPEVFETAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R E+ + + GLV  R    +NAN+ TG IE+  +++ I++ AE  PLP+    +  E 
Sbjct: 62  SLRGEFCVQVKGLVRGRPESQVNANMTTGAIEVLGRELTIINKAE--PLPIDFNTDVSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R R  + +R  +  + F++  TPILTA++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMAEKMKFRARFTSEVRRFLDDQGFMDVETPILTAATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRTHKGQFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  ++++   E ++R +F++  N +     F  + Y++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAEEVMAVTEAMIRTIFKKMLNVDL--PQFPHMSYEEAMRRYGSDKPDLRNPLELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   GG   +R   D   ++    G  GLA++  +
Sbjct: 297 DLLADVEFKVFSGPAN-DPEGRVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWM--K 353

Query: 363 LDESGN-VAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           ++E+G  + G+  PVAK L+     AI  R      D   F A D           R   
Sbjct: 354 VNETGKGIEGVQSPVAKFLSDDIVNAIIERTGAVANDIVLFGADDAKVVADAMGALRLKA 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKA 479
            ++ G++    +   W++DFP +E  + + +    H+PFT P+    E L+ N   ++ +
Sbjct: 414 GEDFGLV-AEGWAPLWVVDFPMFE--KADGRYYALHHPFTAPRDMTPEELEANPDTAL-S 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G +R H +E+   AF  +GI  +  + +FG L  A + G PPH G+
Sbjct: 470 NAYDMVLNGVEVGGGSVRIHRAEMQSAAFRVLGIDDQEAKEKFGFLLDALKYGTPPHAGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR+VML++GA+++REV  FP +      L  +P + + EQL ELG++ +   K
Sbjct: 530 AFGLDRLVMLMVGAESIREVMAFPKTTTAACPLTSAPGSANPEQLVELGIQRIPAEK 586


>gi|197121726|ref|YP_002133677.1| aspartyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|238689889|sp|B4UIE3|SYD_ANASK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|196171575|gb|ACG72548.1| aspartyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 603

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 224/601 (37%), Positives = 341/601 (56%), Gaps = 16/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTHSCG+L  +D+G  V L GWV+  R HGG +F+D+RD  G+TQVV   D      E+A
Sbjct: 10  RTHSCGELTKADIGKEVVLFGWVNNRRDHGGAVFIDLRDRAGLTQVVFEEDVRPDVHELA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R E+ + + G V+SR    +N  + TG+IE+ A  +EI + +E  P  +  E +  E
Sbjct: 70  GQLRLEYCVGVRGKVVSRGG-NVNPKLRTGEIEVHASDLEIFNRSEPAPFQIEDEIDTGE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R +YR+LDLRR  L + ++ R ++ +  R       F+E  TP +   +P GAR+FLV
Sbjct: 129 EKRLQYRYLDLRRAPLQRTLMTRAKVNHLTRNYFTDGGFLELETPFMVKYTPGGARNFLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYAL ++PQ +KQL M +GFDRYFQI  CFRDED R DR P EF Q+D+EMS
Sbjct: 189 PSRLNPGKFYALAESPQLFKQLYMMAGFDRYFQIVRCFRDEDLRLDRQP-EFTQIDVEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR---NPIIM 299
           FVEQ+D+ + ME ++  +++E   G  +   F R+ +++++ +YG DKPDLR     +++
Sbjct: 248 FVEQNDVFDVMEGLVVKLWKEVL-GIEIPRPFQRMPFEESMAKYGNDKPDLRFDMPHVVL 306

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++          +  + +      +   +PA     +R   D++ E+ +  G  GLA  
Sbjct: 307 TDLVRQHDGGGVPLMHEAVKGKGIVKAMRVPASANF-SRTEIDKLEEYVKGMGAKGLARA 365

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G      P+AK +     +AI    + + GD   F  G      +  A+ R H
Sbjct: 366 --KVGEGGEWT-QSPLAKTITPALRQAINEACEAKPGDLLLFQFGKDSVVHTVMANLRVH 422

Query: 420 IAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           +A+ +G+I    +   + F W+++ P +E++EE  +   AH+ FT P         +D  
Sbjct: 423 LAKRMGLIPEYGSGGAWRFLWVVNPPLFEYDEESGQWAAAHHAFTRPHDSDLQFLESDPG 482

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            +  ++YDLV NGFEI  G IR H  EV  + F  +GIS E   ++FG L  A + G PP
Sbjct: 483 KVNCYRYDLVLNGFEIGGGSIRLHDPEVQARVFKAMGISDEEARSKFGFLLDALKMGAPP 542

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL GA+++R+V  +P +Q   DL+ G+P  V   QLREL ++    P
Sbjct: 543 HGGIALGMDRLVMLLTGAESLRDVVAWPKTQKGTDLMTGAPGDVDARQLRELYVKSTYEP 602

Query: 596 K 596
           K
Sbjct: 603 K 603


>gi|332525588|ref|ZP_08401743.1| aspartyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332109153|gb|EGJ10076.1| aspartyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 595

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 235/609 (38%), Positives = 345/609 (56%), Gaps = 36/609 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +  + +   V L GW HR R HGG+IF+D+RD  G+ Q+V +PD    F+ A+
Sbjct: 2   RTTYCGLVSETLMDQTVTLMGWAHRRRDHGGVIFIDLRDREGLVQIVCDPDRPEMFKAAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L + G V +R A T N N+ +G+IE+ A ++E+L+ +   P  +  +    E+
Sbjct: 62  GVRNEFCLKVVGKVRARPAGTENTNLTSGKIEVLAYELEVLNPSVTPPFQL-DDDNLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R  +R LDLRR T+ KN++ R R+   +R  +  + F++  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTHRVLDLRRPTMQKNLMLRYRVAMEVRKYLDEQGFVDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHDGMFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS-NNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           + ++ I    E ++R VF    N   V    + R+ Y +A+ RYG+DKPDLR  +    +
Sbjct: 240 LGEEQIREITEGMVRRVFR---NALGVELPVYERLTYAEAMHRYGSDKPDLRVKLEFTEL 296

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+     +F+VF+   ++  G  V A+   GG   +R+  D   E+ +  G  GLA+I  
Sbjct: 297 TDVMKTVDFKVFAGPATMKGG-RVAALRIPGGAEMSRSEIDAYTEFVKIYGAKGLAWIKV 355

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+ K+L+    E I  R     GD  F           F AD R  + 
Sbjct: 356 NDLAKGREGLQSPIVKNLHDAALEEILKRTGAAAGDLIF-----------FGADKRKVVD 404

Query: 422 QELGIINCNC--FEF-------------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
             LG +       EF              W++DFP +E ++E  + +  H+PFT P+ G 
Sbjct: 405 DALGALRVKIGHSEFGRTHGLFEDKWAPLWVVDFPMFEHDDEAGRWNAVHHPFTAPKDGH 464

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
           E L   D  +  A  YD+V NG+E+  G +R H +EV  + F  + IS E  + +FG L 
Sbjct: 465 EDLMDTDPGACVAKAYDMVLNGWELGGGSVRIHRAEVQSKVFKALNISAEDAKVKFGFLL 524

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            A Q G PPHGG+A G+DR+V L+  A+++R+V  FP +Q    LL G+PS V   QLRE
Sbjct: 525 DALQYGAPPHGGLAFGLDRLVTLMTKAESIRDVIAFPKTQRAQCLLTGAPSNVDEAQLRE 584

Query: 587 LGLRIVENP 595
           L +R+  NP
Sbjct: 585 LHIRL-RNP 592


>gi|310767870|gb|ADP12820.1| aspartyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 595

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 237/596 (39%), Positives = 346/596 (58%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG + +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F+ A 
Sbjct: 2   RTEYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDHQQAFKQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N ++ TG+IE+ A ++ I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIRIVGTVRARDDKNKNGDMATGEIEVFATELTIINRSE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMANRLKVRAKITSLVRRFMDDEGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +  + +  +  F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREIMERLVRNLWLDVKSVDLGA--FPSMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V A+   GG G +R   D    +    G  GLAYI   
Sbjct: 297 DLLKDIEFKVFSGPANDAKG-RVAALRVPGGAGLSRKQIDDYTRFIEIYGAKGLAYIKIN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK LN    +AI  R    DGD  FF A D  K  + A  A R  + 
Sbjct: 356 ERAKGLDGITSPVAKFLNADIVDAILQRTAALDGDLIFFGA-DRAKVVADALGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++L I N + +   W++DFP +E ++ E+ +   H+PFT P+    E LK     +I A 
Sbjct: 415 RDLKITNESAWAPLWVVDFPLFE-DDGEEGLTAMHHPFTAPKDMSPEQLKNAPETAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  ++    F  +GIS+     +FG L  A + G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHNGQMQQTVFGILGISEHEQREKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VMLL G  N+R+V  FP +     L+  +P+  +   L ELG+ +V+  K
Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPNFANPASLTELGIEVVKKSK 588


>gi|306836216|ref|ZP_07469200.1| aspartate--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567937|gb|EFM43518.1| aspartate--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 608

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 238/607 (39%), Positives = 332/607 (54%), Gaps = 29/607 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L        V L+GWV R R HGG+IF+D+RD  GI QVV   +S   E A  
Sbjct: 3   RTHLAGELRKELAEETVTLTGWVSRRRDHGGVIFIDLRDRSGIAQVVFR-ESDVAERAHD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121
           +RSE+ + + G+V  R   + N N+ +G IE++   +E+L+ +  LP  V       E  
Sbjct: 62  LRSEYCVKVIGVVEPRPEGSENPNLPSGDIEVNVTDLEVLNKSAALPFQVDDPSASGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR+   K +  R+    + R  +   +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRERQAKALRLRSAANRAARNVLDKHDFAEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E +++ +++    G  +     R+ Y DA++ YG+DKPDLR  I +  
Sbjct: 241 SFVDQDDVIALGEEIVKELWKLI--GYDIQTPIPRMTYADAMKYYGSDKPDLRFDIKIVE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360
            TE F  + FRVF           V A+   GG    R   D   +WA+ +G  GLAYI 
Sbjct: 299 CTEFFKDTTFRVFQNEY-------VGAVVMDGGASQPRRQFDAWQDWAKQRGAKGLAYI- 350

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +   GPVAK++     E I   +  + GD+ FF AGD     +    AR  I
Sbjct: 351 -TVAEDGTLG--GPVAKNITDAEREGIAEHVGAKPGDAIFFAAGDTKSSRALLGAARGEI 407

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLK 470
           A++L +I    + F W++D P +E + +            K    H+ FT P+       
Sbjct: 408 AKKLDLIKEGDWAFTWVVDAPLFEPSADATASGDVALGHSKWTAVHHAFTSPKPEWIDSF 467

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             +     A+ YD+VCNG EI  G IR H  +V  + F  +GI  E  + +FG L  AF 
Sbjct: 468 DENPGEATAYAYDIVCNGNEIGGGSIRIHQEDVQKRVFEVMGIGDEEAQEKFGFLLDAFS 527

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ +   Q +E G+ 
Sbjct: 528 YGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPIPAAQRKETGVD 587

Query: 591 IVENPKK 597
                KK
Sbjct: 588 FKPEKKK 594


>gi|283783249|ref|YP_003374003.1| aspartate--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441361|gb|ADB13827.1| aspartate--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 598

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/605 (38%), Positives = 343/605 (56%), Gaps = 39/605 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++    VG  V ++GWV R R HGG+ F+D+RD+ G+ QVV   +    E A+
Sbjct: 6   YRTHHAVEVTEELVGQKVTIAGWVDRRRDHGGVAFVDVRDNTGLVQVVIYDE----ETAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117
            +RSE+V+ + G V  R     N ++ TG+IE+ A+ + IL+ ++ LP  V        E
Sbjct: 62  PLRSEFVVQVTGEVRLRPDGNENDHLATGKIEIVAETVTILAKSDALPFQVSTALENESE 121

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR ++ +N+  R+ +  + R  +   NF E  TP    S+PEG
Sbjct: 122 NKLPSEDVRLKYRYLDLRRPSMQRNLKLRSDMAKAARHALEDMNFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294
           LDMEMSF  Q+D++   E V+  +++E   G+ ++    RI + +A+ +YG+DKPDLR  
Sbjct: 241 LDMEMSFASQEDVMAMAERVIAAIWKE--AGHEITLPLPRITWQEAMDKYGSDKPDLRFG 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353
           NP+I   +T++F ++ FRVF           V A+  KGG    R   D   +WA+ +G 
Sbjct: 299 NPLI--ELTDYFKNTPFRVFQASY-------VGAVLFKGGAATPRRQFDAWQDWAKQRGA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAY+     E G +   GPVAK+L+      ++  +  +DGD+ FF AG         
Sbjct: 350 KGLAYVV--FGEDGELK--GPVAKNLSEEERAGLKEAVGAEDGDAVFFAAGSRESSQLLL 405

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464
              R  +A   G+++ + F F W++DFP ++  ++    D A         H+PFTMP  
Sbjct: 406 GAVRVELASRAGLLHPDEFAFTWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSA 465

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D     +  YD+VCNG E+  G +R H  ++  +  + +GI K   + +FG 
Sbjct: 466 DWIDKFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVLGIDKAEADEKFGF 525

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPH GIA G DR   +L GA ++R+V  FP +    D L G+P+ +S EQ 
Sbjct: 526 LLEAFKYGAPPHAGIALGWDRTAAILAGASSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585

Query: 585 RELGL 589
            E G+
Sbjct: 586 AETGV 590


>gi|319786198|ref|YP_004145673.1| aspartyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464710|gb|ADV26442.1| aspartyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 586

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/592 (38%), Positives = 344/592 (58%), Gaps = 16/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG +  S +G  + L+GW    R  GG+ F+D+RDH GI QV   PD+A  F +A 
Sbjct: 2   RTHFCGLVDESLIGQTITLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPDNAEVFPVAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+  E V+ ++G+V +R A  +N  I +G++E+ A +I IL+ A   PLP        E 
Sbjct: 62  SLGYEDVIQVEGVVRARHA--VNDKIRSGKVEVIATRITILNKAA--PLPFHAHENPTEE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  + +    R +++ ++R  + A  F +  TPILT ++PEGARDFLVP
Sbjct: 118 TRLRYRYLDLRRPEMQRMQRTRIKLVQALRRHLDAAGFQDIETPILTKATPEGARDFLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLDME +F
Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V + D+ + +E+++R +F+E   G  +   F R+ + +A+RRYG+DKPDLR  + + +V 
Sbjct: 237 VRERDVQDFVEDMIRAIFKEVV-GVELEAQFPRMTWAEAMRRYGSDKPDLRIDLELVDVA 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           E    S+F VF+   + +P   V A+   GG   +R   D     A   G  GLAYI  +
Sbjct: 296 ELVKDSQFAVFTGPAN-DPDGRVAALRIPGGASLSRKQIDEYAAHAAKFGAKGLAYI--K 352

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           +DE+G ++   P+ K  +     A+   +   +GD  FF AG   K   F    R    +
Sbjct: 353 IDEAGAIS--SPIQKFFSEDAFAALLKHVGAGNGDIVFFGAGGYNKVSDFMGALRLKAGK 410

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           + G++    +   W+ DFP +EW+EEE++    H+PFT P    +  L+ +   ++    
Sbjct: 411 DFGLV-AEGWRPLWVTDFPMFEWDEEEQRYVALHHPFTAPAVDDIAELRAHAKTAVSR-G 468

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  ++    F  +GI  E  E +FG L  A + G PPHGGIA 
Sbjct: 469 YDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEAEAKFGFLLDALKYGAPPHGGIAF 528

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDRI  L+ G +++R+V  FP + +   L+ G+PS +   QL E+ + + E
Sbjct: 529 GIDRIAALMAGTESIRDVIPFPKTTSAQCLMTGAPSPIPAAQLAEVHVTVRE 580


>gi|229525778|ref|ZP_04415183.1| aspartyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229339359|gb|EEO04376.1| aspartyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 591

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 343/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARNLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK L     +AI  R   Q GD   F   D  K  + A  A R    
Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +ELGI N + +   W++DFP +E  ++E  +   H+PFT P     E LK N   ++ + 
Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-GDDEGNVAAMHHPFTSPLNLSPEQLKANPEEAL-SN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +
Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANQAALDELAIAV 583


>gi|254296187|ref|ZP_04963644.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157805741|gb|EDO82911.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 406e]
          Length = 590

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/589 (39%), Positives = 333/589 (56%), Gaps = 14/589 (2%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75
           +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F  A+ VR+E+ + + G
Sbjct: 6   LGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAEGVRNEFCIQVKG 65

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           LV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+ R  +R LDLRR
Sbjct: 66  LVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQL-DDDNLSETTRLTHRVLDLRR 124

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVPSRVN G F+ALP
Sbjct: 125 PQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNAGQFFALP 184

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF+ + +I +  E+
Sbjct: 185 QSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSFLGEQEIRDLFED 243

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++R +F+  + G  +   F  + Y +A+ R+G+DKPDLR  +    +T+     +F+VFS
Sbjct: 244 MIRHIFKT-TIGVELDATFPVMPYSEAMARFGSDKPDLRVKLEFTELTDAMKDVDFKVFS 302

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPV 375
              +   G        KGG   R   D   E+ R  G  GLA+I       G      P+
Sbjct: 303 TPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNERAKGRDGLQSPI 362

Query: 376 AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------RNHIAQELGIINC 429
            K+L+  +  AI  R   QDGD  FF A D  K  + +  A       +   +  G++  
Sbjct: 363 VKNLHDASIAAILERTGAQDGDIIFF-AADRAKVVNDSLGALRLKIGHSEFGKANGLVEA 421

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
             ++  W++DFP +E+++EE +   AH+PFT P+         D     A  YD+V NG+
Sbjct: 422 G-WKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAYDMVLNGW 480

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGGIA G+DRIV +
Sbjct: 481 EIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGGIAFGLDRIVTM 540

Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENPK 596
           + GA ++R+V  FP +Q    LL  +PS V   QLREL +R+   E PK
Sbjct: 541 MAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQPK 589


>gi|37526023|ref|NP_929367.1| aspartyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|46577166|sp|Q7MB41|SYD_PHOLL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|36785453|emb|CAE14400.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase) (asprs)
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 590

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 225/590 (38%), Positives = 339/590 (57%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L ++  G  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A F  A 
Sbjct: 2   RTDYCGQLNLTHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQQAAFSQAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG+IE+ A+ + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMATGEIEVFAESLNIINRSE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR++DLRR  +   +  R +I + +R  M  + F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYIDLRRPEMANRLKTRAKITSFVRRFMDNQGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++R ++ E    +    +F  + + + +RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREMMEKMIRELWFEIDGVDL--GHFPVMTFAEVMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF++  + + G  V  I   GG   +R   D   ++    G  GLA+I   
Sbjct: 297 DLVKDVEFSVFAEPANDSKG-RVAVIRVPGGAELSRKQIDEYGKFVGIYGAKGLAWIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    E +  R D QDGD  FF AG            R  + +
Sbjct: 356 ARAAGLEGVQSPIAKFLNAEVIEGLLSRTDAQDGDILFFGAGSVKVVTDALGALRLKLGR 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +   + +   W++DFP +E ++ E  +   H+PFT P     +    D +S  A  Y
Sbjct: 416 DLNLTKLDSWRPLWVIDFPMFE-DDGEGGLTAMHHPFTSPCNMSAAELAQDPVSAIANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H +E+    F  +GI+++  + +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHRNEMQQAVFRILGINEQEQQEKFGFLLDALKFGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V
Sbjct: 535 LDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSYANPASLEELSISVV 584


>gi|262171801|ref|ZP_06039479.1| aspartyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261892877|gb|EEY38863.1| aspartyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 590

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 234/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD A  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N ++ TG++EL A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKDMATGEVELLARGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK L     +AI  R   Q GD   F   D  K  + A  A R    
Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +ELGI N + +   W++DFP +E  ++E  +   H+PFT P     E LK N   ++ + 
Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-GDDEGNVAAMHHPFTSPLNLTPEQLKANPEEAL-SN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRIKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +
Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583


>gi|86158955|ref|YP_465740.1| aspartyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|97196505|sp|Q2IKX7|SYD_ANADE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|85775466|gb|ABC82303.1| aspartyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 603

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/601 (37%), Positives = 342/601 (56%), Gaps = 16/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTHSCG+L  +D+G  V L GWV+  R HGG +F+D+RD  G+TQVV   D      E+A
Sbjct: 10  RTHSCGELTKADIGKEVVLFGWVNNRRDHGGAVFIDLRDRAGLTQVVFEEDVRPDVHELA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R E+ + + G V+SR    +N  + TG+IE+ A  +EI + +E  P  +  + +  E
Sbjct: 70  GQLRLEYCVGVRGKVVSRGG-NVNPKLPTGEIEVHASDLEIFNRSEPAPFQIEDKIDTGE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R +YR+LDLRR  L + ++ R ++ +  R     + F+E  TP +   +P GAR+FLV
Sbjct: 129 EKRLQYRYLDLRRAPLQQTLMTRAKVNHLTRNYFTDKGFLELETPFMVKYTPGGARNFLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYAL ++PQ +KQL M +GFDRYFQI  CFRDED R DR P EF Q+D+EMS
Sbjct: 189 PSRLNPGKFYALAESPQLFKQLYMMAGFDRYFQIVRCFRDEDLRLDRQP-EFTQIDVEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR---NPIIM 299
           FVEQ+D+ + ME ++  +++E   G  +   F R+ +++++ +YG DKPDLR     +++
Sbjct: 248 FVEQNDVFDVMEGLVVKLWKEVL-GIEIPRPFQRMPFEESMAKYGNDKPDLRFDMPHVVL 306

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++          +  + +      +   +PA     +R   D++ E+ +  G  GLA  
Sbjct: 307 TDLVRQHDGGGVPLMHEAVKAKGIVKAMRVPASANF-SRTEIDKLEEYVKGMGAKGLARA 365

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G      P+AK +     +AI    + + GD   F  G      +  A+ R H
Sbjct: 366 --KVGEGGEWT-QSPLAKTITPALRQAINDACEAKAGDLLLFQFGKESVVHTVMANLRVH 422

Query: 420 IAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           +A+ +G+I    +   + F W+++ P +E++EE  +   AH+ FT P         +D  
Sbjct: 423 LAKRMGLIPEYGSGGAWRFLWVVNPPLFEYDEESGQWAAAHHAFTRPHDSDLQFLESDPG 482

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            +  ++YDLV NGFEI  G IR H  EV  + F  +GIS E   ++FG L  A + G PP
Sbjct: 483 KVNCYRYDLVLNGFEIGGGSIRLHDPEVQARVFKAMGISDEEARSKFGFLLDALKMGAPP 542

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL GA+++R+V  +P +Q   DL+ G+P  V   QLREL ++    P
Sbjct: 543 HGGIALGMDRLVMLLTGAESLRDVVAWPKTQKGTDLMTGAPGDVDARQLRELYVKSTFEP 602

Query: 596 K 596
           K
Sbjct: 603 K 603


>gi|237740162|ref|ZP_04570643.1| aspartyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229422179|gb|EEO37226.1| aspartyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 592

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 239/604 (39%), Positives = 353/604 (58%), Gaps = 36/604 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+  +L   ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLAELREKNIGETVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NPNIPTGDIEVFAKEIEILNACDTLPFQISGIDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TPILT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMINNLKMRHRMIMSIRNYMDQAGFLDVDTPILTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  + G   +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFAVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQ-GQPG 355
           + ++++   +S F  FS   +V  G  V AI  P+     +R       E+ ++     G
Sbjct: 299 LKDLSDIVKNSSFNAFSS--TVQNGGLVKAIVAPSANEKFSRKIISEYEEYVKTYFDAKG 356

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI     + G      P+AK L+    +AI  + + + GD   FI  D  K  + A  
Sbjct: 357 LAYI-----KLGADGISSPIAKFLSEDEMKAIIEKTEAKTGD-VIFIVADKKKVVAAALG 410

Query: 416 A-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           A R  I ++L +IN + F+F W++DFP ++++EEE++    H+PFT       S+K  DL
Sbjct: 411 ALRLRIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFT-------SIKAEDL 463

Query: 475 LSIKAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
               A Q        YDLV NG EI  G IR    ++    F  +G+S+E  + +FG   
Sbjct: 464 DKFLAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFGFFL 523

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            AF+ G PPHGG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL E
Sbjct: 524 DAFKYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDDKQLEE 583

Query: 587 LGLR 590
           L ++
Sbjct: 584 LFIK 587


>gi|308235732|ref|ZP_07666469.1| aspartyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311114716|ref|YP_003985937.1| aspartate--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310946210|gb|ADP38914.1| aspartate--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 598

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 232/605 (38%), Positives = 342/605 (56%), Gaps = 39/605 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V ++GWV R R HGG+ F+D+RD+ G+ QVV   +    E A+
Sbjct: 6   YRTHHAVEVTETLVGQNVTIAGWVDRRRDHGGVAFVDVRDNTGLVQVVIYDE----ETAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GE 117
            +RSE+V+ + G V  R     N ++ TG+IE+ A K+ IL+ ++ LP  V        E
Sbjct: 62  PLRSEFVVQVTGEVRLRPDGNENDHLATGKIEIVANKMTILAKSDALPFQVSTALENESE 121

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + P E +R KYR+LDLRR ++ +N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPSEDVRLKYRYLDLRRPSMQRNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-- 294
           LDMEMSF  Q+D++   E V+  +++E   G+ ++    RI + +A+ +YG+DKPDLR  
Sbjct: 241 LDMEMSFASQEDVMAMAERVIAAIWKE--AGHEITLPLPRITWQEAMDKYGSDKPDLRFG 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQ 353
           NP+I   +T+ F ++ FRVF           V A+  KGG    R   D   +WA+ +G 
Sbjct: 299 NPLI--ELTDFFKNTPFRVFQAPY-------VGAVLFKGGADTPRRQFDAWQDWAKQRGA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAY+     E G +   GPVAK+L+      ++  +  QDGD+ FF AG         
Sbjct: 350 KGLAYVV--FGEDGELK--GPVAKNLSEEERAGLKEAVGAQDGDAVFFAAGSRESSQLLL 405

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQG 464
              R  +A   G+++ + F F W++DFP ++  ++    D A         H+PFTMP  
Sbjct: 406 GAVRVELASRAGLLHPDEFAFTWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSA 465

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D     +  YD+VCNG E+  G +R H  ++  +    +GI K   E +FG 
Sbjct: 466 DWIDKFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGIDKAEAEEKFGF 525

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  AF+ G PPH GIA G DR   +L GA ++R+V  FP +    D L G+P+ +S EQ 
Sbjct: 526 LLEAFKYGAPPHAGIALGWDRTAAILAGASSIRDVIAFPKAGGGRDPLTGAPAPISDEQR 585

Query: 585 RELGL 589
            E G+
Sbjct: 586 AETGV 590


>gi|50121421|ref|YP_050588.1| aspartyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|62287553|sp|Q6D497|SYD_ERWCT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|49611947|emb|CAG75396.1| aspartyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 599

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/591 (39%), Positives = 342/591 (57%), Gaps = 11/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F++A 
Sbjct: 3   RTNYCGQLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFKLAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    IN ++ TG++E+ A  + I++ +E LPL     +   E 
Sbjct: 63  ELRNEFCIQLTGVVRARPESQINKDMATGEVEIFANALTIVNRSEALPLD--SNQTNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLRR  + + +  R RI + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 ARLKFRYLDLRRPEMAQRLKTRARITSFVRRFMDDHGFMDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 240 MTAPQVREVMEQLVRELWLDVKGVDL--GDFPVMTFAEAMRRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V AI   GG   +R   D   ++    G  GLAYI   
Sbjct: 298 DLLKDIEFKVFSGPANDAKG-RVAAIRVPGGSQLSRKQIDEYGKFIEIYGAKGLAYIKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK L+     A+  R   QDGD  FF A D  K  + A  A R  + 
Sbjct: 357 ERAKGLEGVQSPVAKFLSEDVLSALLDRTAAQDGDILFFGA-DSAKVVTDALGALRLKLG 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +   N +E  W++DFP +E  + E  +   H+PFT P+  + S    + +S  A  
Sbjct: 416 RDLNLTKNNSWEPLWVVDFPMFE-EDGEGGLSAMHHPFTAPRDMLPSELAANPVSAIANA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A 
Sbjct: 475 YDMVINGYEVGGGSVRIHSGEMQQTVFRILGITEQEQREKFGFLLDALKYGTPPHAGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V
Sbjct: 535 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLEELAIAVV 585


>gi|258626387|ref|ZP_05721234.1| aspartyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258581439|gb|EEW06341.1| aspartyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 591

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 234/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD A  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N ++ TG++EL A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKDMATGEVELLARGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK L     +AI  R   Q GD   F   D  K  + A  A R    
Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +ELGI N + +   W++DFP +E  ++E  +   H+PFT P     E LK N   ++ + 
Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-GDDEGNVAAMHHPFTSPLNLTPEQLKANPEEAL-SN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRIKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +
Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583


>gi|229520405|ref|ZP_04409830.1| aspartyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229342503|gb|EEO07496.1| aspartyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 591

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 343/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A  +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLACSLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK L     +AI  R   Q GD   F   D  K  + A  A R    
Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +ELGI N + +   W++DFP +E +++E  +   H+PFT P     E LK N   ++ + 
Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEAL-SN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +
Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583


>gi|331701368|ref|YP_004398327.1| aspartyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128711|gb|AEB73264.1| aspartyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 595

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/597 (38%), Positives = 345/597 (57%), Gaps = 17/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT   G +    +G  V L GWV + R  GG+IF+++RD  GI Q+V + +       +A
Sbjct: 3   RTTYAGLVDEQLIGQEVVLKGWVQKRRDLGGLIFIELRDREGIVQLVFSEEFGQDALAVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+V+   G V++R  + IN  + TG+IE+     +IL+ A+  P  +       E
Sbjct: 63  DKLRSEYVVEAKGKVVARDPKEINPKMKTGKIEVDITDAKILATAKTPPFYIQDGINVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++ KYR+LDLRR  + KNI+ R RII S+       +FI+  TP LT S+PEGARD+LV
Sbjct: 123 DLKLKYRYLDLRRPEMQKNILLRNRIIQSIHSYFDQNDFIDIETPTLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQQ+KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+DMEMS
Sbjct: 183 PSRVYPGSFYALPQSPQQFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQIDMEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +Q++I +  E  +  V ++ + G  V   F R+ +D+++ RYGTD+PD+R  + + ++
Sbjct: 242 FADQEEIEDVTEGFIAKVMKD-AMGIDVQLPFKRMDWDESMARYGTDQPDVRFGMELKDL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++     +F+VFS   +V  G +V AI   GG    +R   D+  ++    G  GLA++ 
Sbjct: 301 SDIMKDVDFKVFSG--AVKDGGQVKAIAVPGGAEKYSRKDLDKFADYVVRFGAKGLAWL- 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            ++ + G     GP+AK     +  E I  + + + GD   F A +     +  A  R  
Sbjct: 358 -KVTDDGF---NGPIAKFFKDADLREKILAKAEAKPGDLLLFAADNSRVVANTLAYLRVE 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL--KGNDLLS 476
           IA+E  +I+ + F F WI+++P ++W+ + K+   AH+PFTMP +  +  L  +G D   
Sbjct: 414 IAKEQNMIDESKFAFLWIVNWPLFDWDVDLKRYVAAHHPFTMPNEDDVHYLMNEGEDPHK 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD++ NG E+  G IR H   +  + F  +G +KE  E +FG    A   G PPH
Sbjct: 474 AYAQSYDIILNGLELGGGSIRIHTRALQEKMFEALGFTKESAEAQFGYFLNALDYGFPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GG+A G+DR V LL    N+R+V  FP +    + L  +P  V+ +QL +LGL + +
Sbjct: 534 GGLAIGLDRFVRLLADRDNIRDVIAFPKNSKAVEPLTSAPQPVATKQLEDLGLFVAK 590


>gi|262165437|ref|ZP_06033174.1| aspartyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262025153|gb|EEY43821.1| aspartyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 591

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 234/591 (39%), Positives = 344/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD A  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N ++ TG++EL A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKDMATGEVELLARGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK L     +AI  R   Q GD   F   D  K  + A  A R    
Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +ELGI N + +   W++DFP +E  ++E  +   H+PFT P     E LK N   ++ + 
Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-GDDEGNVAAMHHPFTSPLNLTPEQLKANPEEAL-SN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRIKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +
Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALDELAIAV 583


>gi|84623197|ref|YP_450569.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|97197041|sp|Q2P582|SYD_XANOM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|97197048|sp|Q5H2B1|SYD_XANOR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|84367137|dbj|BAE68295.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 588

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/595 (38%), Positives = 343/595 (57%), Gaps = 21/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + TG++E+ A +I IL+ A   PLP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRTGKVEVIATRISILNKAA--PLPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RRYG+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMMRAIFKEVVDVD-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + +V E    SEF VF+   +   G  V A+   GG   +R   D     A   G  GLA
Sbjct: 296 LVDVAELVKSSEFPVFTAAANDADG-RVAALRIPGGATLSRKQIDDYAAHAAKYGAKGLA 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L E+G V+   P+AK  +     A+   +   +GD  FF AG   K   F    R
Sbjct: 355 YI--KLSETGEVS--SPIAKFFSEEAFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476
               +E  ++    +   W+ DFP +EW+EE ++    H+PFT P    +  L+ N   +
Sbjct: 411 LKAGKEFDLV-AEGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTA 469

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPH
Sbjct: 470 V-SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GGIA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++
Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV 583


>gi|218295028|ref|ZP_03495864.1| aspartyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244231|gb|EED10756.1| aspartyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 581

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 245/593 (41%), Positives = 342/593 (57%), Gaps = 24/593 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L GWV+R R  GG+IF+D+RD  G+ Q+VA+P S  + +A+ 
Sbjct: 3   RTHYAGSLREEHAGQEVVLEGWVNRRRDLGGLIFIDLRDREGVVQLVAHPQSPAYAVAER 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPES 123
           VRSEWV+   GLV  R     N  + TG +E+    +E+L+ A+  P PV  G R   E 
Sbjct: 63  VRSEWVVRAKGLVRLRPEP--NPRLATGAVEVELTSLEVLAEAKTPPFPVDAGWRGEEEK 120

Query: 124 -----IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                +R KYR+LDLRR  + +N+  R R+I ++   +  E FI+  TP LT S+PEGAR
Sbjct: 121 EAGEELRLKYRYLDLRRRRMQENLRLRHRVIKAIWDYLDREGFIQVETPFLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP R   G FYALPQ+PQ +KQ+LM +GFDRYFQIA CFRDED R+DR P +F Q+D
Sbjct: 181 DFLVPYRQEPGLFYALPQSPQLFKQMLMVAGFDRYFQIARCFRDEDLRADRQP-DFTQMD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE +DIL   E ++  VF E + G  +   F R+ Y++A+ R+G+DKPDLR  + 
Sbjct: 240 LEMSFVEVEDILTLNEGLMAHVFRE-ALGVELPLPFPRLSYEEAMERFGSDKPDLRFGLE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +  V   F  S F +F +   V        +P        AF   + E A+ +G  GLA+
Sbjct: 299 LKEVGPLFRESPFDLFRQAERVK----ALRVPKALSRKEIAF---LEEEAKRRGAGGLAW 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
              R++E G   G   VAK+L  V    +++  + Q GD+  F AG P K  + A  A  
Sbjct: 352 A--RVEEGGFAGG---VAKYLEPVRGALLQI-TEAQPGDTLLFAAG-PFKVAAEAMGAVR 404

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  +L  +    F F W++DFP  EW+ E     + H+PFT P      L  +D   ++
Sbjct: 405 LLLADLLALKREGFRFLWVVDFPLLEWDGERGGWTYMHHPFTSPHPEDLPLLESDPGRVR 464

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG E+  G IR H   +  + F+ +GI +E  + +FG    A   G PPHGG
Sbjct: 465 ALAYDLVLNGVEVGGGSIRIHDPLLQAKVFALLGIGEEEQKEKFGFFLEALAYGAPPHGG 524

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IA G+DR++ ++ G+ ++REV  FP ++   D L G+PS VS EQLRELGL +
Sbjct: 525 IAWGLDRLLAMMTGSPSIREVIAFPKNKEGKDPLTGAPSPVSEEQLRELGLMV 577


>gi|295396092|ref|ZP_06806275.1| aspartate--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971033|gb|EFG46925.1| aspartate--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 590

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 232/599 (38%), Positives = 328/599 (54%), Gaps = 33/599 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    V   V ++GWV R R HGG+ F+D+RD  GI QVV + D     +A  
Sbjct: 3   RTHEAGSLRTDHVDQTVTVTGWVDRRRDHGGVAFIDLRDASGIVQVVVHED-----VADE 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE---YP 121
           +++E V+ + G V  R     N  + TG+IE+    +EIL+ A  LP  V    E     
Sbjct: 58  LKNETVVKVTGTVKPRPEGNTNDALPTGEIEVVDTDVEILAQAAALPFQVSEHAEDSKVG 117

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR      +  R+ +  + R  +    FIE  TP LT S+PEGARDF+
Sbjct: 118 EETRLKYRYLDLRRPASGNVLRLRSDVNKTARQVLDKHKFIEIETPTLTRSTPEGARDFV 177

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLL  +G +RY+QIA C+RDED R+DR P EF QLD+E 
Sbjct: 178 VPARLKPGSWYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEA 236

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQDDI+   E +L  +++       +     R+ Y DA+ +YGTDKPDLR  + + +
Sbjct: 237 SFVEQDDIIALAEEILVELWKLID--VEIPTPIERMTYKDAMEKYGTDKPDLRFGLPLTD 294

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           +TE+F  + FRVF           V A+   GG    R   D   +WA+ +G  GLAY+ 
Sbjct: 295 LTEYFAGTGFRVFQAPY-------VGAVVYPGGASLPRRQFDAWQDWAKQRGAKGLAYV- 346

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ E G +   GPVAK+L+      +   +    GD+ FF AG      +    AR  I
Sbjct: 347 -QVGEDGTLG--GPVAKNLSDEEKNGLAAAVGANPGDAIFFAAGKATDSRALLGAARVEI 403

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLK 470
            +  G+I    + F W++D P +E  E+          +      H+ FT P+       
Sbjct: 404 GERTGLIKEGDWSFVWVVDAPMFEPAEDAVAAGDVAVGDGSWTAVHHAFTAPKPEFADTF 463

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  S  A+ YD+VCNG EI  G IR H  +V  + F  +GIS+E  + +FG L  AF+
Sbjct: 464 DTDPGSALAYAYDIVCNGNEIGGGSIRIHRPDVQERVFKVMGISQEDAQEKFGFLLDAFK 523

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            G PPHGGIA G DR+V LL G +++R+   FP S N  D L  +P+ ++ +Q +E G+
Sbjct: 524 FGAPPHGGIAFGWDRLVSLLAGTESIRDTIAFPKSGNGYDPLTAAPAPITDQQRKEAGV 582


>gi|220935408|ref|YP_002514307.1| aspartyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254781760|sp|B8GUK0|SYD_THISH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219996718|gb|ACL73320.1| aspartyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 592

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 232/591 (39%), Positives = 346/591 (58%), Gaps = 11/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG +  S +   V L GWV+R R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 2   RSHYCGSVNESHLDQEVTLCGWVNRRRDHGGVIFIDLRDREGLVQVVFDPDLPEVFATAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL + G V  R A T N ++ TG IE+  +++ +L+ AE  P  +  E E  E 
Sbjct: 62  RVRSEYVLKVKGRVRRRPAGTENPDLPTGAIEVLGRELTVLNSAETPPFQL-DEDEVNEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR++DLRR  + K +  R R+  ++R  +    F++  TP+LT ++PEGARD++VP
Sbjct: 121 TRLRYRYVDLRRPAMQKRLQMRARVSRTLRRFLEDNGFLDIETPMLTKATPEGARDYIVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM  G DRY+QI  CFRDED R+DR P EF QLD+E SF
Sbjct: 181 SRTHPGSFFALPQSPQLFKQLLMMGGMDRYYQIVRCFRDEDLRADRQP-EFTQLDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ I+  ME ++R +F +      +   F R+ Y +A+ RYG+DKPDLR P+ +  +T
Sbjct: 240 MDEEGIMGLMEEMVRELFAQVLE-VPLHTPFQRMSYAEAMARYGSDKPDLRIPLELTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   KGG  +R   D    +    G  GLAYI   
Sbjct: 299 DIMGEVDFKVFSGP-ARDPAGRVAALRVPKGGELSRKDIDDYTHFVGRYGAKGLAYIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+ K +       I  R   +DGD  FF A D  +  + A  A R  + 
Sbjct: 358 DLNAGREGLQSPILKFMPDTVVVEILGRTGAEDGDLIFFGA-DKARIVNEALGALRVKLG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAF 480
            +LG++    +   W++DFP +E +E+E +    H+PFT P+    E L GN    I + 
Sbjct: 417 HDLGLVE-RGWRPLWVVDFPMFEHDEKEGRWVALHHPFTAPRVERPEELTGNPGEMI-SR 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H + +    F+ +GI +    ++FG L  A + G PPHGGIA
Sbjct: 475 AYDMVLNGTEVGGGSVRIHTTAMQQAVFNLLGIGEAEARDKFGFLLDALKYGCPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VML+ G++++R+V  FP +Q     L  +P+ VS  QL+EL +R+
Sbjct: 535 FGLDRLVMLMTGSQSIRDVMAFPKTQTAHCPLTDAPAEVSDAQLKELSIRV 585


>gi|261879647|ref|ZP_06006074.1| aspartate-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270333664|gb|EFA44450.1| aspartate-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 585

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 225/597 (37%), Positives = 343/597 (57%), Gaps = 26/597 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT++CG+L ++D G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   D +  + 
Sbjct: 2   YRTNTCGELRLTDAGKEVTLAGWVQRTRKMGGMTFVDLRDRYGITQIVFNEADDQSLCDR 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + + G V  R ++  N  + TG IE+ AQ++ +LS +   P  +    +  
Sbjct: 62  ANKLGREYCVQVKGAVCERQSK--NPKMDTGDIEVVAQELTVLSSSLTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR+ + KN+  R R+   +R  +    F+E  TPIL  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRREAVRKNLELRHRMTILIRNFLDKHQFMEVETPILIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM  GFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVGGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD+++  E + R +F+E            ++ + +A++RYG+DKPDLR  +    
Sbjct: 239 SFVDQDDVIDLFEEMARHLFKEIRGVEL--PKLEQMTWHEAMKRYGSDKPDLRFGMEFVE 296

Query: 302 VTEHFV-HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359
           + + F    +F VF++   +        +P       +   +  +   R Q G  GL YI
Sbjct: 297 LKDAFAGKGDFSVFNEAAYIGG----ICVPGCADYSRKQLNELTDFVKRPQVGAKGLVYI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-----PLKFCSFAA 414
            +  D  G+V     V K  +      I+ +   +DGD    ++GD      ++ CS   
Sbjct: 353 KFMAD--GSVK--SSVDKFYSPEVLAEIKEKTGAKDGDLVLILSGDNANKTRIQLCSL-- 406

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP     SL     
Sbjct: 407 --RLEMGNRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDISLLDEHP 464

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YD VCNG E+  G IR H +++  + F  +G + E  E +FG L  AF+ G P
Sbjct: 465 EQVRAKAYDFVCNGIEVGGGSIRIHDTQLQEKMFEVLGFTPESAEAQFGFLMNAFKYGAP 524

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PH G+A G+DR V ++ G  ++R+   FP + +  D+++ +PS +  +QL EL +++
Sbjct: 525 PHAGLAFGLDRFVSIMAGLDSIRDCMAFPKNNSGRDVMLDAPSRIDDKQLDELQIKL 581


>gi|325922682|ref|ZP_08184425.1| aspartyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325546834|gb|EGD17945.1| aspartyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 583

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/597 (38%), Positives = 345/597 (57%), Gaps = 18/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P++A  F +A 
Sbjct: 2   RTHFCGLVDETMIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPENAEVFPVAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+  E VL ++G+V +R A  +N  + +G++E+ A +I IL+ A   PLP        E 
Sbjct: 62  SLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIATRISILNKAA--PLPFHAHENPGEE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGARDFLVP
Sbjct: 118 TRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGARDFLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLDME +F
Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V + D+ + +E+++R +F+E  +   ++  F R+ + +A+RRYG+DKPDLR  + + +V 
Sbjct: 237 VRERDVQDFVEDMIRAIFKEVVDVE-LAAQFPRMTWAEAMRRYGSDKPDLRIALELVDVA 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           E    SEF VF+   +   G  V A+   GG   +R   D     A   G  GLAYI  +
Sbjct: 296 ELVKSSEFPVFTAAANDADG-RVAALRIPGGAALSRKQIDEYAAHAAKYGAKGLAYI--K 352

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           L E+G V+   P+AK  +     A+   +   +GD  F  AG       F    R    +
Sbjct: 353 LSETGEVS--SPIAKFFSEEAFAALLAHVGAGNGDIVFLGAGGYNTVSDFMGALRLKAGK 410

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +  ++  + +   W+ DFP +EW+EE ++    H+PFT P    +  L+ N   ++ +  
Sbjct: 411 DFKLV-ADTWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTAV-SRG 468

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGGIA 
Sbjct: 469 YDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIAF 528

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           GIDRI  L+ G +++R+V  FP +    DL+  +PS +  EQL E+ +++   PK++
Sbjct: 529 GIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIPAEQLAEVHVQV--RPKQV 583


>gi|325521380|gb|EGD00220.1| aspartyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 600

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/601 (38%), Positives = 338/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQVKGLVRNRPDGTVNAGLKSGKIEVLCHELNVLNASITPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTID-VALDEKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KG   +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGAELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   +DGD  FF A D  K  + +  A       
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++E+ +   AH+PFT P+         D    
Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+   E P
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQP 598

Query: 596 K 596
           K
Sbjct: 599 K 599


>gi|315225114|ref|ZP_07866931.1| aspartate--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314944797|gb|EFS96829.1| aspartate--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 584

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/597 (37%), Positives = 339/597 (56%), Gaps = 21/597 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60
           YRTH+CG+L +S     V LSGWV R+R  G +I++D+RD YGITQ++ +    D   FE
Sbjct: 2   YRTHTCGELRLSHEKQQVTLSGWVQRIRNKGFMIWVDLRDRYGITQLIFDEERTDKTVFE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AK++  E V+ I G V+ R  E  NANI TG++E+    + +L+ +E  P  +    + 
Sbjct: 62  QAKTLSREDVIQIQGTVIKR--EAANANIPTGEVEILVTALTLLNHSELPPFTIEDNTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR  +  N++ R ++   +R  +  + FIE  TP+L  S+PEGARDF
Sbjct: 120 GEDLRMKYRYLDIRRTPVRDNLIFRHKVSIMVRNYLSEQGFIEVETPVLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNAGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI+ T E + + + +E          F R+ Y +A++ YG DKPD+R  +   
Sbjct: 239 MSFVEQEDIIQTFEGLAKHLLKELK--GLEFGTFPRMTYAEAMKTYGNDKPDIRFGMKFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357
            + +   H +F++F      N    V  I   G     R   D + EW +    G  G+ 
Sbjct: 297 ELNDLAQHRDFKIF------NEAELVVGIAVPGANSYTRKEIDALVEWVKRPQVGASGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  + +E G+      V K  N  + +A   R   + GD    ++G   K     +  R
Sbjct: 351 YV--KCNEDGSFK--SSVDKFYNEDDLKAWAERTGAKAGDLICILSGKANKVRGQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ LG+   + +   W++DFP  EW+EEE++    H+PFT P+     L   D  ++
Sbjct: 407 MELAERLGLRKPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDTDPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG E+  G IR    E+  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 467 RANAYDLVLNGNEVGGGSIRIFNQELQAKMFQLLGFTPEQAQAQFGFLMNAFKYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G DR+V LL G + +R+   FP + +  D+++ +PS +   QL+EL +++  N
Sbjct: 527 GLAFGFDRLVALLGGQETIRDFIAFPKNNSGRDVMIDAPSPIDEAQLKELNIQLTIN 583


>gi|126662943|ref|ZP_01733941.1| aspartate--tRNA ligase [Flavobacteria bacterium BAL38]
 gi|126624601|gb|EAZ95291.1| aspartate--tRNA ligase [Flavobacteria bacterium BAL38]
          Length = 581

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 224/594 (37%), Positives = 340/594 (57%), Gaps = 21/594 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60
           YR+H+CG+L  S + + V L+GWV + R  G +I++D+RD YGITQ++      D A FE
Sbjct: 2   YRSHNCGELNASHINTEVTLAGWVQKSRDKGFMIWVDLRDRYGITQLIFDEKRTDKAVFE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AKS+  E+V+ I G V+ R  E+ NAN+ TG IE+   ++ +L+ A+  P  +  E + 
Sbjct: 62  RAKSLGREFVIQIKGTVIER--ESKNANMATGDIEILVTELTVLNEAQLPPFTIEDETDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LD+RR+ +  N++ R ++   +R  +  + F +  TP L  S+PEGARDF
Sbjct: 120 GEDIRMKYRYLDIRRNPVKNNLLFRHKVSMEVRKYLSDQGFCDVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DILN  E + R + +E          F RI YD A++ YG DKPD+R  +   
Sbjct: 239 MAFVEQEDILNMFEGLTRHLLKEIKGVEV--EKFPRITYDYAMKTYGNDKPDIRFEMKFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQ--GQPGLA 357
            +     H +F VF      N    +  I A G     R   D + +W +    G  G+ 
Sbjct: 297 ELNAVAQHKDFPVF------NSAELLVGIAAPGCASYTRKEIDALIDWVKRPQVGASGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  + +E G       V K  +  + +      + + GD    ++G+  K  +  +  R
Sbjct: 351 YV--KCEEDGTFK--SSVDKFYDQEDLKQWAEITNAKPGDLILILSGNANKVRTQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A  LG+   + F   W++DFP  EW+EE  +    H+PFT P+    +L   +   +
Sbjct: 407 MEVATRLGLRKSDEFAPLWVVDFPLLEWDEESGRYHAMHHPFTSPKPEDMALIETEPGKV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG EI  G IR H  ++  + F  +G SKE  + +FG L  AF+ G PPHG
Sbjct: 467 RANAYDMVLNGNEIGGGSIRIHDRDLQSRMFDLLGFSKEEAQAQFGFLMSAFEFGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR+V +L G + +R+   FP + +  D+++ +PS +   QL+EL +++
Sbjct: 527 GLAFGLDRLVSILGGQETIRDFIAFPKNNSGRDVMIDAPSKIDETQLQELHIKL 580


>gi|16765243|ref|NP_460858.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167994202|ref|ZP_02575294.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|22257058|sp|Q8ZNV2|SYD_SALTY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|16420437|gb|AAL20817.1| aspartate tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|205327868|gb|EDZ14632.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|261247071|emb|CBG24892.1| AspRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267993884|gb|ACY88769.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301158421|emb|CBW17930.1| Aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|321224545|gb|EFX49608.1| Aspartyl-tRNA synthetase ; unambiguous [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323130185|gb|ADX17615.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332988794|gb|AEF07777.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 590

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 228/592 (38%), Positives = 337/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L     EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNNKVVADALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  Y
Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEGAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  ++  L ELG+++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANLAALTELGIQVVKK 586


>gi|149278258|ref|ZP_01884396.1| aspartyl-tRNA synthetase [Pedobacter sp. BAL39]
 gi|149231024|gb|EDM36405.1| aspartyl-tRNA synthetase [Pedobacter sp. BAL39]
          Length = 581

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/589 (38%), Positives = 335/589 (56%), Gaps = 16/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT +CG L + ++G  V L GWV + R  GG+ F+DIRD YGITQ+V N D      E A
Sbjct: 3   RTTTCGALTIENLGENVVLCGWVQKSRDLGGMTFIDIRDRYGITQLVFNMDDNRDLCEAA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++  E+V+   G V+ RS +  N  + TG++E+    +E+L+ A+  P  +  + +  +
Sbjct: 63  RNLGREFVIKASGTVVERSNK--NLKMPTGEVEIKITALEVLNAAKLPPFMIEDDTDGGD 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR+ L  N+V R R+  S+R  +   +FIE  TP+L  S+PEGARDF+V
Sbjct: 121 DLRMKYRYLDLRRNPLRNNMVLRHRMAQSVRRYLDKLDFIEVETPVLIKSTPEGARDFVV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N+G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 181 PSRMNEGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+EQ+DILNT E ++R +F+E    +       R+ Y DA+R YG+DKPD R  +    +
Sbjct: 240 FIEQEDILNTFEGLIRTLFKEIKGIDLPE--VPRMQYADAMRFYGSDKPDTRFDMRFVEL 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     +F VF           V  I A G     R   D + ++ +         I+ 
Sbjct: 298 NDMVKGKDFPVFDN------AELVIGINAAGCAAYTRKQVDELTDFIKRPQIGATGLIYM 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R +E G++     V K  N    +     ++ + GD    +AG   K     ++ R  + 
Sbjct: 352 RHNEDGSLK--SSVDKFYNEEELKKWSDAMNTKPGDLVLIMAGTQDKVRKQLSELRLEMG 409

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             LG+ + N +   W++DFP  EW+EE ++    H+PFT P+    SL      +++A  
Sbjct: 410 TRLGLRDKNTYSALWVLDFPLLEWDEETERYHAMHHPFTSPKPEDISLLDTAPGAVRANA 469

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H   +    F ++G S E  + +FG L  AF+ G PPHGGIA 
Sbjct: 470 YDMVVNGTEIGGGSIRIHDRTLQALMFKHLGFSPEEAQKQFGFLMDAFEFGAPPHGGIAF 529

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G DR+  +  G  ++R+V  FP + +  D+++ SPS +  +QL EL ++
Sbjct: 530 GFDRLCSIFAGLDSIRDVIAFPKNNSGRDVMIDSPSAIDDKQLNELKIK 578


>gi|325963408|ref|YP_004241314.1| aspartyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469495|gb|ADX73180.1| aspartyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 592

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 232/596 (38%), Positives = 332/596 (55%), Gaps = 29/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    +G  V L+GWV R R HGG+ F+D+RD  G+ QVV   +    E+   
Sbjct: 3   RTHDLGSLRSEHIGQTVTLAGWVGRRRDHGGVAFVDLRDASGVAQVVVREE----EVFHG 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL I G V  R     N  + TG+IE+ A+K+ IL+ ++ LP  +    E  E  
Sbjct: 59  LRNEYVLQIIGTVSRRPEGNENPALATGEIEVMAEKVTILNTSDPLPFQIDEHVEVGEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R K+R+LDLRR    +N+  R+      R  +  + F+E  TP LT S+PEGARDF+VP+
Sbjct: 119 RLKHRYLDLRRPGPARNLRLRSEANRVARELLHQDGFVEVETPTLTRSTPEGARDFVVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLL   GF++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDDI+   E++++ +++       +     RI Y DA+ R+G+DKPDLR  + +  +TE
Sbjct: 238 EQDDIIALGESIVKALWKLID--VEIPTPIQRITYHDAMARFGSDKPDLRFGVELTELTE 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  + F VF           V A+   GG    R   D   E+A+ +G  GLAY+ ++ 
Sbjct: 296 FFKDTNFGVFKAPY-------VGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVLFK- 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +A  GPVAK+L       +   +  + GD  FF AG+     +    AR  I   
Sbjct: 348 -EDGELA--GPVAKNLTEAERSGLADAVGAKPGDCIFFAAGEKSAARALLGAARVEIGHR 404

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGND 473
            G+I+ N + FCW++D P +E                K    H+ FT P+         D
Sbjct: 405 TGLIDPNDWAFCWVVDAPMFEPAAAAVASGDVAVGAGKWTAVHHAFTSPKPEYMDSFDTD 464

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  A+ YD+VCNG EI  G IR H S+V  + F  +G+S E  + +FG L   F+ G 
Sbjct: 465 PESALAYAYDIVCNGNEIGGGSIRIHQSDVQERVFEVMGLSHEDAQEKFGFLLEGFKYGA 524

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGGIA G DR+V LL G  ++R+V  FP + N  D L  +P+ ++ +Q +E G+
Sbjct: 525 PPHGGIAFGWDRVVALLSGVDSIRDVIAFPKTGNGYDPLTAAPAPITPQQRKEAGV 580


>gi|311113681|ref|YP_003984903.1| aspartate--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310945175|gb|ADP41469.1| aspartate--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 590

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 233/605 (38%), Positives = 335/605 (55%), Gaps = 33/605 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAK 63
           RTH+ G+L  +++G  V L+GWV R R HGG+ F+D+RD  G+TQ V  N D   FE   
Sbjct: 3   RTHTNGELTAANIGETVTLTGWVARRRDHGGVAFVDLRDRAGVTQCVFHNEDD--FE--- 57

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+VL + G V  R     N N+ TG+IE+    +E+L+ A  LP  +    E  E 
Sbjct: 58  HLRNEYVLRVTGQVTKRPEGNENPNLATGEIEVEVSAVEVLNTAAPLPFQIDEHVEVGEE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR    + +  R+    + R  +  + ++E  TP LT S+PEGARDFLVP
Sbjct: 118 ARLRYRYLDLRRPEPARIMRLRSDANRAARNLLADDGYLEVETPTLTRSTPEGARDFLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R+  GS+YALPQ+PQ +KQLL   G ++Y+QIA C+RDED R+DR P EF QLD+E SF
Sbjct: 178 ARLAPGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQP-EFTQLDIEASF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+QDDI++  E ++  V+        +     R+ Y +A+ +YGTDKPDLR  + +  +T
Sbjct: 237 VDQDDIIDLGERIVEAVWNLID--VQIPRPIRRMTYTEAMEKYGTDKPDLRFGLELTELT 294

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWR 362
           ++F ++ FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   
Sbjct: 295 DYFANTTFRVFKAPY-------VGAVVMPGGASQPRRTLDAWQEWAKQRGAKGLAYVL-- 345

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G +   GPVAK++       +        GD  FF AG+  +  +    AR  I  
Sbjct: 346 VQEDGEL--TGPVAKNITDEERAGLAAATGANPGDCIFFAAGEAKQARALLGAARVEIGH 403

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGN 472
             G+I    + F W++D P +E   E  +  D A         H+ FT P+         
Sbjct: 404 RTGLIKDGEWSFLWVVDAPLFESAAEATESGDVALGHSAWTAVHHAFTAPKPEFLDTFDK 463

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D  S  A+ YD+VCNG EI  G IR H  +V  + F+ +GI +E  + +FG L  AF+ G
Sbjct: 464 DPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFAVMGIGEEEAQEKFGFLLDAFKYG 523

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PP GGIA G DRI+ LL G  ++REV  FP + N  D L  +P+ ++ +Q +E G+   
Sbjct: 524 APPMGGIAFGWDRIISLLAGVDSIREVIAFPKTGNGYDPLTAAPAPITPQQRKEAGVDF- 582

Query: 593 ENPKK 597
             PKK
Sbjct: 583 -KPKK 586


>gi|46190374|ref|ZP_00206443.1| COG0173: Aspartyl-tRNA synthetase [Bifidobacterium longum DJO10A]
          Length = 586

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/592 (39%), Positives = 339/592 (57%), Gaps = 39/592 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V L+GWV R R HGG+ F+D+RD  G+ QVV   +    ++A+ +RSE+V+ I G 
Sbjct: 6   VGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVIYDE----DMARPLRSEFVIQITGE 61

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GEREYP-ESIRFKYR 129
           V  R     N ++ TG+IE+ A+ IEIL+ ++ LP  V        E + P E +R KYR
Sbjct: 62  VRLRPDGNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENESENKLPGEDVRLKYR 121

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           +LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEGARDF+VP+R+  G
Sbjct: 122 YLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEGARDFVVPARLVPG 181

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           S+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF QLDMEM++V+Q+D+
Sbjct: 182 SWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQLDMEMAYVDQEDV 240

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPIIMHNVTEHFV 307
           +   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  NP++   +TE+F 
Sbjct: 241 MAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFGNPLV--ELTEYFK 296

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRLDES 366
           ++ FRVF           V A+  KGG    R   D   +WAR +G  GLAY+     E+
Sbjct: 297 NTPFRVFQAPY-------VGAVVFKGGAATPRRQFDAWQDWARQRGAKGLAYVV--FGEN 347

Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426
           G +   GPVAK+L+      +R  +  ++GD+ FF AG            R  +A   G+
Sbjct: 348 GELK--GPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESAQLLLGAVRVELASREGL 405

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQGGMESLKGNDLLSI 477
           ++   F F W++DFP ++  ++    D A         H+PFTMP          D    
Sbjct: 406 LDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWIDKFDKDPEHA 465

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD+VCNG E+  G +R H  ++  +    +GI+KE  + +FG L  AF+ G PPH 
Sbjct: 466 MSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGFLLEAFKYGAPPHA 525

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           G+A G DR V +L GA ++R+V  FP +    D L G+P+ +S EQ  E G+
Sbjct: 526 GLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAETGV 577


>gi|312139537|ref|YP_004006873.1| aspartate-tRNA ligase asps [Rhodococcus equi 103S]
 gi|325672579|ref|ZP_08152275.1| aspartate--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|311888876|emb|CBH48189.1| aspartate-tRNA ligase AspS [Rhodococcus equi 103S]
 gi|325556456|gb|EGD26122.1| aspartate--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 593

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 238/602 (39%), Positives = 329/602 (54%), Gaps = 28/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L        V L+GWV R R HGG+IF+D+RD  G++QVV        E A  
Sbjct: 3   RTHLAGSLRPEHAEQTVTLTGWVARRRDHGGVIFIDLRDASGVSQVVFRAGD-VLEQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  I TG IE++A ++E+L+  E  PLP   + +  E  
Sbjct: 62  LRAEYCVKVTGKVEVRPEGNQNFEIPTGAIEVNATELEVLN--ESAPLPFQLDDQAGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+   + I  R++   + R  +    F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRREGPGRAIRLRSKANAAARAVLAHHEFVEVETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            Q+D++   E +L  V++    G+ +S    R+ Y +A+RR+G+DKPDLR  I +    +
Sbjct: 239 TQEDVILLAEEILHAVWKLI--GHEISTPIARMTYAEAMRRFGSDKPDLRFDIELVECMD 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 297 FFKDTTFRVFQAEY-------VGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL--V 347

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +   GPVAK+L     + +   +  + GD  FF AG      +    AR  IA++
Sbjct: 348 GEDGTLG--GPVAKNLTDAERDGLAAHVGAKPGDCIFFAAGATKPMRALLGAARGEIARK 405

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGND 473
             +I+ + + F WI+D P +E   +     D A         H+ FT P+         D
Sbjct: 406 QNLIDPDAWAFVWIVDAPMFEPTADATASGDVALGYSAWTAVHHAFTSPKPESIDTFDTD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                A+ YD+VCNG EI  G IR H  ++  + F  +GIS E  E +FG L  AF  G 
Sbjct: 466 PGKALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFKVMGISHEEAEEKFGFLLDAFAFGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G DRI  LL G  ++REV  FP S    D L  +P+ ++  Q +E G+    
Sbjct: 526 PPHGGIAFGWDRITALLAGVDSIREVIAFPKSGGGVDPLTDAPAPITELQRKESGIDAKP 585

Query: 594 NP 595
            P
Sbjct: 586 EP 587


>gi|289669606|ref|ZP_06490681.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 588

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/602 (38%), Positives = 348/602 (57%), Gaps = 23/602 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + TG++E+ A +I IL+ A   PLP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRTGKVEVIATRISILNKAA--PLPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E ++R +F+E  + + ++  F R+ + +A+RR+G+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEVMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRFGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + +V E    SEF VF+   +   G  V A+   GG G +R   D     A   G  GLA
Sbjct: 296 LVDVAELVKSSEFPVFTAAANDVDG-RVAALRIPGGAGLSRKQIDEYAAHAAKYGAKGLA 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L E+G V+   P+AK  +     A+   +   +GD  FF AG   K   F    R
Sbjct: 355 YI--KLSETGEVS--SPIAKFFSEEAFAALIKHVGAGNGDIVFFGAGGYTKVSDFMGALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476
               +E  ++  + +   W+ DFP +EW++E ++    H+PFT P    +  L+ N  ++
Sbjct: 411 LKAGKEFNLL-ADGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARIA 469

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +    YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPH
Sbjct: 470 VSR-GYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   PK
Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV--RPK 586

Query: 597 KI 598
           ++
Sbjct: 587 QV 588


>gi|282882110|ref|ZP_06290751.1| aspartate--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281298140|gb|EFA90595.1| aspartate--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 589

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 229/593 (38%), Positives = 352/593 (59%), Gaps = 17/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT+ CGDL  +D+ S V L GWV R R  G IIF+D+RD  GI QVV N  S    I K+
Sbjct: 10  RTNYCGDLRENDIDSEVILMGWVQRARSLGSIIFIDLRDREGICQVVVNETSPEEVINKA 69

Query: 65  VR--SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +  +E+V+ + G+V  RS  +IN  I TG+IE+ A +I+IL+ ++  P+ V       E
Sbjct: 70  TKLHNEYVIAVKGIVRMRS--SINDKIPTGKIEVLASEIKILNESQVPPIYVKDNDNVAE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR LDLR+ ++ +N+  R++I    R       FIE  TP+LT  +PEGARD+LV
Sbjct: 128 NMRLKYRTLDLRKPSMLRNLKLRSKIYKITRDFFYDNGFIEVETPMLTKPTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ  KQLLM SG DRY QI  CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRVNSGKFYALPQSPQLMKQLLMVSGLDRYIQITKCFRDEDLRANRQP-EFTQIDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV +DD+++  E  L+ +F+E  + + +     R+ Y +A+ R+G DKPDLR  + + ++
Sbjct: 247 FVTEDDVMSINEKFLQKLFKEMLDID-IKLPLRRMKYSEAMDRFGVDKPDLRFGMELKDI 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
           ++    S F+VF +  +V  G  V  I  K G    ++    ++ E+ +     GL  + 
Sbjct: 306 SDIVKDSGFKVFEE--AVKDG-SVRGINVKNGAEKYSKKKIKKLEEFVKDFKAKGLVQV- 361

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++++  + +    V++   I+N   I      + GD    +AG          + RN I
Sbjct: 362 -KVEDEIDSSIKKFVSEE--ILN--KIVQAFQAEKGDLILIVAGKDQVVYDSLGNLRNKI 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +I+ N +E  WI DFP +E++E+EK+    H+PFT P+     +  ++    +A 
Sbjct: 417 ARDLDLIDKNSYEMLWITDFPLFEYDEDEKRYVAKHHPFTSPKDEDLDIILSNPEKARAK 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR +  E+  + F  +G + E  + +FG L  AF+ G PPHGG+A
Sbjct: 477 AYDIVINGDEMGGGSIRINDQEIQKKMFKALGFTDEDAKEKFGFLLEAFKYGAPPHGGLA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR+ ML  GA+N+R+V  FP +Q+   LL  +P+ +S +QL E+ ++++E
Sbjct: 537 YGLDRLTMLFTGAENIRDVIAFPKTQSATCLLTEAPTELSEKQLEEVHIKVIE 589


>gi|94985225|ref|YP_604589.1| aspartyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|123079904|sp|Q1IZB4|SYD_DEIGD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|94555506|gb|ABF45420.1| aspartyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 577

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 234/590 (39%), Positives = 327/590 (55%), Gaps = 20/590 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT   G+L  S VG  V L GW +R R  GG+IF+++RD  G  QV   PDS  F  A +
Sbjct: 3   RTCYIGELNASLVGQTVILQGWANRRRDLGGLIFIELRDRSGSIQVEVEPDSPAFHEADT 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E+VL ++G    R  E     +     E+ A ++ +LS A+  P  +       E I
Sbjct: 63  VRAEYVLEVEGRFQPRPEEQRKGGL--ADYEVIALRVTVLSAAKTPPFELDKGESVAEDI 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  + ++++ R+R + +    + AE F++  TP+LT S+PEGARDFLVPS
Sbjct: 121 RLKYRYLDLRRPEMQRHLMLRSRAVAAATAFLDAEGFVQVETPMLTRSTPEGARDFLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+N G FYALPQ+PQ +KQLLM +GFDRY+Q A CFRDED R+DR P +F QLDMEMSFV
Sbjct: 181 RLNPGEFYALPQSPQLFKQLLMIAGFDRYYQFARCFRDEDLRADRQP-DFTQLDMEMSFV 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            Q+D+L+  E +L  VF    +   +   F R+ Y +A+ RYG+DKPDLR      +VT+
Sbjct: 240 TQEDVLDVQERLLAHVFRTVLD-YELPLPFPRLSYQEAMDRYGSDKPDLRFDRAFADVTD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F   EF  F+   +V     V A PA      R   D +   A+  G  GLA   W   
Sbjct: 299 LFRGGEFGAFADAETVK----VLAAPAL----TRKQLDELERVAKQNGAKGLA---WARR 347

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E   + G   +++ L      A+  R  ++ G +  F AG+  K  +     R  +    
Sbjct: 348 EGDGLTGG--ISRFLG-EQAAALLERTGVEPGGTLLFSAGEWKKAVTALGAVRLALRDLF 404

Query: 425 GIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL-SIKAFQY 482
            +      F+  W++DFP  E++EE     + H+PFT P+     L G +    I+A  Y
Sbjct: 405 DLAAGGPRFQVAWVLDFPQLEFDEEAGSWTYMHHPFTAPRPEDIPLFGTERQGEIRAQAY 464

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NGFE+  G IR H   V  Q F  +G+S+     +FG    A   G PPHGGIA G
Sbjct: 465 DLVLNGFEVGGGSIRIHDPAVQTQMFQAIGLSEAEAREKFGFFLDALSYGTPPHGGIAWG 524

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            DR+VM++ GA ++REV  FP +    DL+ G+PS VS  QL E+G+ + 
Sbjct: 525 FDRLVMVMAGASSIREVIAFPKNNRGVDLMAGAPSPVSPAQLAEVGVAVT 574


>gi|134296922|ref|YP_001120657.1| aspartyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166225331|sp|A4JHR9|SYD_BURVG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|134140079|gb|ABO55822.1| aspartyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 600

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/601 (38%), Positives = 338/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRGEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + I GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQIKGLVRNRPEGTVNAGLKSGKIEVLCHELIVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGGELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   +DGD  FF A D  K  + +  A       
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++E+ +   AH+PFT P+         D    
Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+   E P
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQP 598

Query: 596 K 596
           K
Sbjct: 599 K 599


>gi|323340841|ref|ZP_08081093.1| aspartate--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323091964|gb|EFZ34584.1| aspartate--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 586

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/590 (37%), Positives = 340/590 (57%), Gaps = 14/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT   G +    +G  V L GWV + R  G +IF D+RD  G+ Q+V + +     F+IA
Sbjct: 3   RTTYAGLVDEKYLGQEVVLKGWVQKSRNLGNLIFADLRDREGLVQLVFSHEISEEAFKIA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++++SE+V+ I G V+ R+   +N N+ TG+IE+   ++ IL+ A+  P  +  +    +
Sbjct: 63  ETLKSEYVIEIVGKVVGRAENAVNPNMKTGKIEVETSRVTILNEAKTTPFSIEDDTTATD 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R +YR+LDLRR  + ++++ R RI  ++   +   +F++  TP LT S+PEGARD+LV
Sbjct: 123 DTRLRYRYLDLRRPEMQRSLMIRNRITQTVHRYLDENHFLDIETPYLTRSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R DR P EF Q+DMEMS
Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQP-EFTQIDMEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  D+I    E +L+ V +E + G  +     +I +++A+ R+G+DKPD+R  + + ++
Sbjct: 242 FMTADEIREMTEGLLKAVMKE-TLGIEIETPIKQITWNEAMDRFGSDKPDIRFGMELQDM 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            E    + F+VF   L    G +V AI   GG    +R   +   E+ +  G  GLA++ 
Sbjct: 301 AEVVKGAGFKVFDSAL--ENGGQVKAIVVPGGADKYSRKKIEEKQEYIKRFGAKGLAWM- 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ + G     GPV+K       E ++     + GD   F+A +           R  I
Sbjct: 358 -KVTDEGLA---GPVSKFFKEKEAE-VKEATGAKAGDLLLFVADNRKVVADSLGYLRVSI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I+ + F F W++D+P +E++EE ++   AH+PFTMP      L   D     A 
Sbjct: 413 AKELDLIDNSKFAFIWVVDWPLFEYSEEFERYIAAHHPFTMPNEEDLDLLETDPHKCHAQ 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  ++  + F  +G +KE  E +FG    A   G PPHGG+ 
Sbjct: 473 SYDIVLNGYELGGGSIRIHRRDIQEKMFKALGFTKESAEAQFGWFMEALDYGFPPHGGLG 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G+DR  MLL G  N+REV  FP +    + L  +PSTV+ +QL EL LR
Sbjct: 533 LGLDRFAMLLAGKDNIREVIAFPKNSKASEPLTNAPSTVAEKQLEELYLR 582


>gi|160900885|ref|YP_001566467.1| aspartyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|238687172|sp|A9BP37|SYD_DELAS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|160366469|gb|ABX38082.1| aspartyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 600

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 234/598 (39%), Positives = 343/598 (57%), Gaps = 14/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD A  F+ A+
Sbjct: 4   RSHYCGLVTEALMGETVTLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRAEMFKTAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + GLV +R   T N  + +GQIE+   ++ +L+ +   P  +  E    E+
Sbjct: 64  GLRNEFCVQVKGLVRARPEGTTNDKLKSGQIEVLCHELNVLNASVTPPFQLDDE-NLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R LDLRR  + +N++ R R    +R  +  E FI+  TP+L  S+PEGARD+LVP
Sbjct: 123 VRLTNRVLDLRRPYMQRNMMLRYRTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM +G+DRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGEFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++++I    + ++  VF+  +  +     F  + Y DA  R+G+DKPDLR  +    +T
Sbjct: 242 LDEEEIRAIFQRMITEVFK--TQLDVDLGEFPMMTYQDAAFRFGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           E     +F+VFS   +   G  V A+   GG   +R   D+  E+ +  G  GLA+I   
Sbjct: 300 EIMKDVDFKVFSTPATTKGG-RVVALRVPGGSQISRGEIDQYTEFVKIYGAKGLAWIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K+L+      I  R   QDGD  FF A D  K  + +  A R  + 
Sbjct: 359 EVAKGRDGLQSPIVKNLHDAAIAEILKRTGAQDGDLIFFGA-DKEKIVNDSIGALRLKVG 417

Query: 422 Q-ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             E G  N    N +   W++DFP +E +EE  +    H+PFT P+ G E L   D  + 
Sbjct: 418 HSEFGKANGLFENRWAPLWVVDFPMFEHDEENDRWAAVHHPFTSPKDGHEELMVTDPANC 477

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+E+  G +R H ++V  + F  + IS E    +FG L  A Q G PPHG
Sbjct: 478 LAKAYDMVLNGWELGGGSVRIHRADVQSKVFDALKISPEDARAKFGYLLDALQYGAPPHG 537

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR++ L+ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+  NP
Sbjct: 538 GLAFGLDRLITLMTGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL-RNP 594


>gi|126174260|ref|YP_001050409.1| aspartyl-tRNA synthetase [Shewanella baltica OS155]
 gi|166225426|sp|A3D477|SYD_SHEB5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|125997465|gb|ABN61540.1| aspartyl-tRNA synthetase [Shewanella baltica OS155]
          Length = 592

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/597 (38%), Positives = 340/597 (56%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLIQVVYDPDLPEVFNVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + GLV +R    +N  + TG+IE+  Q + I++ A+ LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGLVRARPDSQVNGQMKTGEIEVLGQALTIINAADPLPLSMDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +S+R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLIFRAKVTSSVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + ++ 
Sbjct: 241 MSSEQVMAKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VFS   +   G  V A+   GG   +R   D   ++    G  GLA++   
Sbjct: 299 DLLKEVEFAVFSGPANDEEG-RVAALRIPGGAALSRKQIDDYTKFVGIYGAKGLAWMKIN 357

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            D S  + G+  PV K LN      I  R   Q GD   F A             R    
Sbjct: 358 -DLSLGLEGIQSPVLKFLNDSIVNEIVSRTGAQTGDIILFGADQATVVAESMGALRLKAG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++  ++    +   W++DFP +E  +        H+PFT P+G     L+ N    +   
Sbjct: 417 EDFSLLQGE-WRPLWVVDFPMFE--KINGNFHAVHHPFTAPRGVTAAELEANPANRVSD- 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H  E+    F  +GI+ E  + +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +VE   K
Sbjct: 533 FGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVEKAVK 589


>gi|301301178|ref|ZP_07207334.1| aspartate--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300851177|gb|EFK78905.1| aspartate--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 590

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 222/592 (37%), Positives = 344/592 (58%), Gaps = 18/592 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFE 60
           RT   G +    +   V L GWV + R  G +IF+D+RD  GI Q+V     NP++   +
Sbjct: 3   RTTYAGLVDEKYLDQEVCLKGWVQKRRNLGNLIFIDLRDIEGIVQLVFSQEFNPEA--LK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSE+V+ + G V++R  + IN N+ TG++E+    IEIL+ A+  P  +  +   
Sbjct: 61  VAEQLRSEYVIEVKGKVVARGEKAINPNMRTGKVEVEVSDIEILNKAKTTPFDIADDINA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R +YR+LDLRR  + K ++ R RI  ++   +   +F++  TP LT S+PEGARD+
Sbjct: 121 SDDLRLQYRYLDLRRPEMQKALMIRNRITQTVHSYLDENHFLDIETPYLTRSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  G FYALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R DR P EF Q+D+E
Sbjct: 181 LVPSRVYPGHFYALPQSPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQP-EFTQIDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  ++I    E +L+ V +E  + + +     RI +++A+ R+G+DKPD+R  + + 
Sbjct: 240 TSFMSAEEIQEMTEGLLKRVMKETLDVD-IKTPIQRITWNEAMDRFGSDKPDIRFGMELK 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +++    +++F+VF   +++  G +V AI   GG    +R   +   E+ +  G  GLA+
Sbjct: 299 DMSSAVQNADFKVFD--MTLENGGQVKAITVPGGADKYSRKQIEEKQEYIKRFGAKGLAW 356

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  ++ + G     GP+AK       E I+   + + GD   F+A +           R 
Sbjct: 357 V--KVTDDGLT---GPIAKFFT-ERAEDIKAAAEAKSGDLILFVASNRKVVADSLGYLRV 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+E+ +IN + F F W++D+P +E++EE  +   AH+PFTMP      L   D     
Sbjct: 411 AIAKEMDMINKDEFAFIWVVDWPLFEYSEEFDRYIAAHHPFTMPNEEDLDLLETDPHKCH 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G IR H  ++    F  +G +KE  E +FG    A   G PPHGG
Sbjct: 471 AQSYDIVLNGYELGGGSIRIHRRDIQEAMFKALGFTKEKAEEQFGWFMDALDFGFPPHGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           +A G+DR  MLL G  N+REV  FP +    + L  +PSTV+ +QL EL L+
Sbjct: 531 LALGLDRFAMLLAGKDNIREVIAFPKNSKASEPLTHAPSTVAPKQLNELYLK 582


>gi|120612283|ref|YP_971961.1| aspartyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|166225310|sp|A1TT99|SYD_ACIAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|120590747|gb|ABM34187.1| aspartyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 604

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 233/601 (38%), Positives = 348/601 (57%), Gaps = 16/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  + +G  V L+GWV+R R HGG+IF+D+RD  G  QVV +PD A  F+ A+
Sbjct: 4   RSHYCGLVTEALMGQTVTLAGWVNRRRDHGGVIFIDLRDREGNVQVVCDPDRADMFKTAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV +R   T N ++ +G+IE+   ++ +L+ +   P  +  E    E+
Sbjct: 64  GVRNEFCVQVKGLVRARPEGTTNDSLKSGRIEVLCHELNVLNPSVTPPFQMDDE-NLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + +N++ R +    +R  +  E FI+  TP+L  S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPYMQRNLMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM +G+DRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    + ++  VF+  +  +     F  + Y DA  R+G+DKPDLR  +    +T
Sbjct: 242 LNEEEIRAIFQRMVTEVFK--TQLDVDLGEFPIMTYQDAAFRFGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEV-WAIPA---KGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           E     +F+VFS   ++  G  V   +P    + GG +R   D   E+ +  G  GLAYI
Sbjct: 300 EVMKDVDFKVFSGAANMQGGRVVALRVPGGARENGGLSRGEIDAYTEFVKIYGAKGLAYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
                  G      P+ K+++      I  R   QDGD  FF A D  K  + A  A R 
Sbjct: 360 KVNELAKGRDGLQSPIVKNIHDAAIAEILKRTGAQDGDLLFFGA-DKTKVVNDAIGALRL 418

Query: 419 HIAQ-ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
            I   E G  N    N +   W++DFP +E++E++ +    H+PFT P+ G E L   D 
Sbjct: 419 KIGHSEFGRKNGLFENVWAPLWVVDFPMFEYDEDDARWVAVHHPFTSPKDGHEDLMDTDP 478

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               A  YD+V NG+E+  G +R H +EV  + F+ + ++ E    +FG L  A Q G P
Sbjct: 479 GKCLAKAYDMVLNGWELGGGSVRIHRAEVQSKVFAALKLTPEDARAKFGYLLDALQYGAP 538

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR++ L+ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+  N
Sbjct: 539 PHGGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL-RN 597

Query: 595 P 595
           P
Sbjct: 598 P 598


>gi|227529154|ref|ZP_03959203.1| aspartate--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227350998|gb|EEJ41289.1| aspartate--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 595

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 228/592 (38%), Positives = 346/592 (58%), Gaps = 16/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT+  G+     VG  V L GWV + R  GG+IF+D+ D  GI Q+V N   +   F+IA
Sbjct: 3   RTNYAGETSEKQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKENPEAFKIA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +VR+++VL + G V  R+ + IN  + TG++E++  +I++L+ +E  P  +  + +  E
Sbjct: 63  NAVRNQYVLEVQGKVQLRAEKEINPEMKTGKVEVAVDQIKVLAKSETTPFDIVDDVDASE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + KN++ R+++ + +      E F++  TP LT S+PEGARD++V
Sbjct: 123 DLRMKYRYLDLRRPEMMKNLMLRSKVTSVVHHYYDNEGFMDVETPDLTRSTPEGARDYIV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLMA+G D+Y+QIA CFRDED R DR P EF Q+D EMS
Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQIARCFRDEDLRGDRQP-EFTQIDTEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +DI    E +++ V +E   G  V   F R+ + +++ +YG+DKPD R  +++H++
Sbjct: 242 FATPEDIQTVTEGLIKKVMKEVL-GVDVKTPFPRMEWQESMDKYGSDKPDTRFGMLIHDL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +     S F+VFS   +V  G  V AI   GG    +R    +  E+ +  G  GLA++ 
Sbjct: 301 SSIVKDSSFKVFSG--TVAKGNFVRAICVPGGADKYSRKDISKKEEYIKRFGAKGLAWV- 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++ E G     GP+AK +N    +AI   +  + GD   F+AG     C      R  I
Sbjct: 358 -KVTEDGY---SGPIAKFIND-KADAINAEMGAKSGDLILFVAGSFHVVCDALGYLRREI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLK-GNDLLSIK 478
           ++E  +I  N + + W++++P +E++E   K   AH+PFTM  +  +  L+ G D     
Sbjct: 413 SKEQDMIAPNQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLENGEDPHKAH 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD++ NG EI  G IR H  +V  +    +G +KE  E RFG L +A   GMPP GG
Sbjct: 473 AQSYDIILNGQEIGGGSIRIHDPKVQEKVLKALGYTKERAEARFGFLLKALTLGMPPEGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           +A G+DR VMLL  A N+R+V  FP +    + L  +P  VS +QL +L ++
Sbjct: 533 LAFGLDRWVMLLAQADNIRDVIPFPKNSKAVEPLTAAPGKVSQQQLDDLKVQ 584


>gi|88803543|ref|ZP_01119068.1| aspartyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88780555|gb|EAR11735.1| aspartyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 1115

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/608 (37%), Positives = 345/608 (56%), Gaps = 32/608 (5%)

Query: 2    HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDS--AC 58
              YRTH+   L  + +   V LSGWV  VR HG +IF+D+RD    I QV  + ++    
Sbjct: 521  EEYRTHTVSQLSEASINQKVTLSGWVSSVRDHGELIFIDLRDSSTQIFQVRLSRETFPNL 580

Query: 59   FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
             E+ K ++ E V+ + G+V+ R+ +  NA + TG++EL    +EIL++++ LP  +    
Sbjct: 581  DELVK-LKPESVISVTGIVLQRNEDDYNAGLRTGKLELETTDLEILNLSKTLPFEIKRAF 639

Query: 119  EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
            +  E +RF+Y+FLD R D + + IV R ++I  +R  +  E F+E  TPILTA + EGAR
Sbjct: 640  KSNEKVRFEYKFLDHRNDEVRRAIVNRHKVIKLLRDLLDEEEFLEIETPILTAGTDEGAR 699

Query: 179  DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            +F+VP+R   GSFY LPQAPQQ+KQ+LM  GF++YFQIA CFRDED R DR P EF QLD
Sbjct: 700  EFIVPTRKQVGSFYTLPQAPQQFKQMLMVGGFEKYFQIARCFRDEDSRGDRQP-EFTQLD 758

Query: 239  MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            +EM+FV    I++    +   V  +      V   F  I Y +A+ +YG D+PDLR  + 
Sbjct: 759  LEMAFVSMQQIIDLNTRLFNEVVRKIYGKKWVLYPFEVITYKNAMDKYGCDRPDLRYGLQ 818

Query: 299  MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR---AFCDRMNEWARSQGQPG 355
            M ++T     + F+VFSK ++     +   + AK  GG R      + +   A+  G  G
Sbjct: 819  MQDITSIVKETSFQVFSKPIADGGIVKCIKVSAKEQGGKRMSKGQIESLTTIAQQNGLGG 878

Query: 356  LAYIFWRLDESGNVAGMGPVAKHL------NIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
            LAYI     +        P+ K L      NI+   A +V      GD  FF A D    
Sbjct: 879  LAYIIVNEHDL-----QSPIIKFLGEEIAKNIIQFTAAKV------GDIVFFSAAD-YAT 926

Query: 410  CSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----G 464
             + A DA R  + + L ++N       W++DFP +E   +E +  F HNPF+MP      
Sbjct: 927  ANKALDAVRQEMGRVLNLVNPKELRPAWVIDFPMFE-KTDEGRWTFTHNPFSMPAIYDLE 985

Query: 465  GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
               ++KG+++ +I A QYDL+ NG+EI  G +R H SE++   + N+G + E +    G 
Sbjct: 986  KHMNVKGDEIGTIIAQQYDLILNGYEIGGGSVRAHKSEILEATYRNMGYTHEEMMKSVGT 1045

Query: 525  LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
            +++AFQ G PPHGGIA GIDR++M+L    ++REV  FP +    DLL  +PS +S +++
Sbjct: 1046 MHKAFQYGAPPHGGIAWGIDRLMMILEKKASIREVMAFPKTGASEDLLFNAPSPLSDKKV 1105

Query: 585  RELGLRIV 592
             E+ +RI+
Sbjct: 1106 EEMNVRII 1113


>gi|161613543|ref|YP_001587508.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|167552463|ref|ZP_02346216.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168238531|ref|ZP_02663589.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168259824|ref|ZP_02681797.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|194442789|ref|YP_002041166.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194735477|ref|YP_002114936.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|238912039|ref|ZP_04655876.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|189082139|sp|A9MUB9|SYD_SALPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238689770|sp|B4TYS4|SYD_SALSV RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238693528|sp|B4SVF1|SYD_SALNS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|161362907|gb|ABX66675.1| hypothetical protein SPAB_01263 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401452|gb|ACF61674.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194710979|gb|ACF90200.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197288631|gb|EDY28006.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|205322921|gb|EDZ10760.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205351266|gb|EDZ37897.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|322616901|gb|EFY13809.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322618139|gb|EFY15031.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625810|gb|EFY22629.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626262|gb|EFY23072.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632676|gb|EFY29421.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322639020|gb|EFY35713.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322640460|gb|EFY37113.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322644225|gb|EFY40770.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649547|gb|EFY45979.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655455|gb|EFY51763.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660234|gb|EFY56472.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322662915|gb|EFY59122.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322668100|gb|EFY64259.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674140|gb|EFY70234.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675506|gb|EFY71580.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322683080|gb|EFY79096.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686774|gb|EFY82752.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195335|gb|EFZ80515.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323199227|gb|EFZ84322.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204048|gb|EFZ89063.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207483|gb|EFZ92431.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323217467|gb|EGA02186.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323221958|gb|EGA06348.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323224432|gb|EGA08720.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231489|gb|EGA15602.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235931|gb|EGA20010.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240501|gb|EGA24544.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245393|gb|EGA29393.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323247813|gb|EGA31751.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323253612|gb|EGA37440.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323255041|gb|EGA38829.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323260274|gb|EGA43895.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266865|gb|EGA50351.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269071|gb|EGA52527.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 590

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 228/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L     EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  Y
Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKK 586


>gi|332286022|ref|YP_004417933.1| aspartyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330429975|gb|AEC21309.1| aspartyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 596

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/597 (37%), Positives = 348/597 (58%), Gaps = 18/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT   G++    +   V L GWVHR R HGG+IF+D+RD  G+ Q+V +PD+   F  A+
Sbjct: 2   RTCYTGEVSKEHLDQTVTLFGWVHRRRDHGGVIFIDLRDRAGLAQIVVDPDNVEAFSTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + GLV  R   T N ++ +G+IE+  ++IE+L+ +   P  +  +    E+
Sbjct: 62  HIRNEFCVRVTGLVRLRPDGTSNPDLKSGEIEVLCREIEVLNASVTPPFQL-DDDNLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + +N++ R R+   +R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPQMQQNLMLRYRVSIEVRKYLDNLGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 181 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++ I    E ++R VF    +   +   F  + +++A+RRYG+DKPDLR  +   +V 
Sbjct: 240 LNEEQIREIFEGMIRHVFARVQSVE-LPVAFPTMTWEEAMRRYGSDKPDLRVKLEFVDVG 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V A+   GG    R+  D   ++    G  GLAYI  +
Sbjct: 299 DLMQDVEFKVFSAPAN-DPASRVVALRIPGGASMPRSEIDAYTKFVAIYGAKGLAYI--K 355

Query: 363 LDESGNVAG--MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA---- 416
           ++++ ++      P+ K++++     +  R   Q GD  FF   D +K  + A  A    
Sbjct: 356 VNDAASIPEGLQSPIVKNISVDALAKVIERTGAQSGDLIFF-GADKVKVVNDAIGALRVK 414

Query: 417 --RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
              +   Q+ G+     ++  W++DFP +E++EEE +   AH+PFT P+ G E L   D 
Sbjct: 415 VGHSEFGQQNGLFEAG-WKPLWVVDFPMFEYDEEEGRYFAAHHPFTSPKDGHEDLLEKDP 473

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A  YDLV NG+E+  G +R H +++  + F  + I  E    +FG L  A Q G P
Sbjct: 474 ASALAKAYDLVLNGWEVGGGSVRIHRADIQTKVFQALNIDAEEARAKFGFLLDALQYGAP 533

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PHGG+A G+DR+V ++  A+++R+V  FP +Q    LL  +PS V  +QLREL +R+
Sbjct: 534 PHGGVAFGLDRLVTMMAKAESIRDVIAFPKTQRAQCLLTQAPSGVDEKQLRELHIRL 590


>gi|88705602|ref|ZP_01103312.1| Aspartyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88700115|gb|EAQ97224.1| Aspartyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 593

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/596 (38%), Positives = 351/596 (58%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H+CG L  +D+   V L GWV R R HGG+IFLD+RD  GI QVV +PD+   F  A 
Sbjct: 2   RSHNCGLLRSADIDETVTLCGWVDRRRDHGGVIFLDLRDRDGIVQVVFDPDTEEHFATAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL + G V +RS  T+N ++ TG+IE+  ++IE+L+ A   P  +       E 
Sbjct: 62  RVRSEYVLKVTGRVRARSEATVNPSMPTGEIEVLGKEIEVLNTAATPPFQLDEHTSVGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR++DLRR  + + +  R+ + +++R  +  E F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLRYRYMDLRRPEMQQRLRLRSEVTDAVRRFLHGEGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHPGQFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++  I+   E ++RG+F+   + +    +F  + + +A+ R+G+DKPDLR P+ + +V 
Sbjct: 241 MDEAGIMEITERMVRGLFKAVLDVDL--PDFPHMTWAEAMERFGSDKPDLRIPLELVSVD 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF +  + +P   V A+   GG   +R   D    +  + G  GLA+I   
Sbjct: 299 DLMQQVDFKVF-RGPADDPLGRVAALKVPGGASISRKEIDDYTRYVGNYGARGLAWIKVN 357

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            D +  V G+  P+ K +      ++  RL + +GD  FF A             R  + 
Sbjct: 358 -DLAAGVEGLQSPILKFMPEDVVASMMERLGVANGDIVFFGADRAGIVNEALGALRIKVG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            + G++  + +   W++DFP +E ++ +      H+PFT P   + +L+ +   ++ +  
Sbjct: 417 SDQGLVG-DGWAPLWVVDFPMFE-DDGDGGWTPLHHPFTAPACDLATLREHPGEAL-SRA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G +R H  E     F  +GI  E    +FG L  A + G PPHGG+A 
Sbjct: 474 YDMVLNGTELGGGSVRIHNLETQEAVFDILGIDPEEAREKFGFLLDALKYGAPPHGGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DRIVML+ GA ++R+V  FP +Q    ++  +P TV   QLREL +R+ E  KK
Sbjct: 534 GLDRIVMLMSGAASIRDVIAFPKTQTAACVMTEAPGTVGAAQLRELHIRLREQEKK 589


>gi|161502985|ref|YP_001570097.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189082138|sp|A9MND2|SYD_SALAR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|160864332|gb|ABX20955.1| hypothetical protein SARI_01047 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 590

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 339/592 (57%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHINTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E  + +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKDVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L+    EAI  R   Q+GD  FF A +           R  + +
Sbjct: 356 DRAKGLDGITSPVAKFLSTEIVEAILARTGAQNGDMIFFGADNKKVVADALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + + + +   W++DFP +E ++ E  +   H+PFT P+    S       +  A  Y
Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKK 586


>gi|227513283|ref|ZP_03943332.1| aspartyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083484|gb|EEI18796.1| aspartyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 595

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 229/601 (38%), Positives = 351/601 (58%), Gaps = 18/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT   G +    +G  V L GWV + R  GG+IF+++RD  GI Q+V + +       +A
Sbjct: 3   RTTYAGLVDDKLIGKEVVLKGWVQKRRDLGGLIFIELRDREGIVQLVFSEEFGKDALAVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R E+V+   G V++R+ + IN  + TG+IE+     +IL+V++  P  +       E
Sbjct: 63  DKLRGEYVVEAKGTVVARAPKEINPKMKTGKIEVDITDAKILAVSKTPPFYIEDGINVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++ KYR+LDLRR  +  NI+ R RII S+      E FI+  TP LT S+PEGARD+LV
Sbjct: 123 DLKLKYRYLDLRRPEMQYNILLRNRIIQSIHSFFDGEGFIDIETPTLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQQ+KQ+LM +GFD+Y+QIA C+RDED R DR P EF Q+DMEMS
Sbjct: 183 PSRVYPGSFYALPQSPQQFKQMLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQIDMEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +Q++I++  E  +  V ++ + G  V   F R+ +D+++ R+GTD+PD+R  + + ++
Sbjct: 242 FADQEEIMDVTEGFIAKVMKD-AMGKDVKLPFKRMDWDESMARFGTDQPDVRFGMELKDL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++   + +F+VFS   +V  G +V AI   GG    +R   D+   +    G  GLA++ 
Sbjct: 301 SDIMKNVDFKVFSG--AVENGGQVKAIAVPGGADKYSRKDLDQFASYVERFGAKGLAWL- 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              D+S N    GP+AK     +  + I  + + + GD   F A +        A  R  
Sbjct: 358 KVTDDSFN----GPIAKFFKDADLRQKILDKAEAKPGDLLLFAADNSRIVADTLAYLRVE 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIK 478
           IA+E  +I+ + F F WI+++P + W+ + K+   AH+PFTMP +  +  L  +D    K
Sbjct: 414 IAKEQNMIDESKFAFLWIVNWPLFHWDVDLKRYVAAHHPFTMPNEEDVHYLLNDDEDPHK 473

Query: 479 AF--QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           A+   YD++ NG E+  G IR H  ++  + F  +G +KE  E++FG    A   G PPH
Sbjct: 474 AYAQSYDIILNGLELGGGSIRIHTRKLQERMFKALGFTKESAESQFGYFLTALDYGFPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR V LL   +N+R+V  FP +    + L  +PS V+ +QL +LG+  VEN  
Sbjct: 534 GGLAIGLDRFVRLLADRENIRDVIAFPKNSKAVEPLTSAPSPVANKQLDDLGI-FVENQD 592

Query: 597 K 597
           K
Sbjct: 593 K 593


>gi|255009372|ref|ZP_05281498.1| aspartyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313147129|ref|ZP_07809322.1| aspartyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313135896|gb|EFR53256.1| aspartyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 585

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/590 (38%), Positives = 338/590 (57%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           +RTH+CG+L +SDV   V+LSGWV R R  GG+ F+D+RD YGITQ+V N   D+   E 
Sbjct: 2   FRTHTCGELRISDVNKQVKLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEIDAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ I G V  R ++  N NI TG IE+   ++ IL+ A   P  +    +  
Sbjct: 62  ANKLGREYVIQIVGTVNERFSK--NGNIPTGDIEIIVSELNILNSAITPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR+ +  N+  R ++   +R  +    F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D++ T E + + +F+   N   ++  F R+ + +A++ YG+DKPD+R  +    
Sbjct: 239 SFVEQEDVIVTFEGMAKHLFKVIRNIE-LTEPFPRMPWSEAMKLYGSDKPDIRFGMEFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDILKGHGFSVFD-----NAAY-IGGICAEGAASYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  G V     V K       + ++     + GD    ++G D +K      + R  
Sbjct: 352 ARIEADGTVK--SSVDKFYTQEVLQQLKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  +++A
Sbjct: 410 MGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSQLQNKMFELLGFTPERAQEQFGFLMNAFKFGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L  G  ++R+   FP + +  D+++ +P+ +   QL EL L
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLEELNL 579


>gi|21243880|ref|NP_643462.1| aspartyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|24212401|sp|Q8PHU5|SYD_XANAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|21109482|gb|AAM37998.1| aspartyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 588

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/602 (38%), Positives = 349/602 (57%), Gaps = 23/602 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + +G++E+ A +I IL+ A   PLP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIATRISILNKAA--PLPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RR+G+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRFGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + +V E    S+F VF+   +   G  V A+   GG   +R   D     A   G  GLA
Sbjct: 296 LVDVAELVKASQFPVFTAAANDADG-RVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLA 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L E+G V+   P+AK  +  +  A+   +   +GD  FF AG   K   F    R
Sbjct: 355 YI--KLSETGEVS--SPIAKFFSEESFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476
               +E  +I  + +   W+ DFP +EW+EE ++    H+PFT P    +  L+ N   +
Sbjct: 411 LKAGKEFDLI-ADGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTA 469

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPH
Sbjct: 470 V-SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   PK
Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV--RPK 586

Query: 597 KI 598
           ++
Sbjct: 587 QV 588


>gi|121593296|ref|YP_985192.1| aspartyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|222110018|ref|YP_002552282.1| aspartyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|166225313|sp|A1W4E1|SYD_ACISJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781730|sp|B9ME28|SYD_DIAST RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|120605376|gb|ABM41116.1| aspartyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|221729462|gb|ACM32282.1| aspartyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 603

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/602 (38%), Positives = 349/602 (57%), Gaps = 18/602 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  + +G  V LSGWV+R R HGG+IF+D+RD  G  QVV +PD    F++A+
Sbjct: 4   RSHYCGLVTEALLGQTVTLSGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRPEMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV +R   T N ++ +G+IE+  Q++ +L+ +   P  +  +    E+
Sbjct: 64  DVRNEFCVQVKGLVRARPEGTTNDSLKSGKIEVLCQELNVLNPSVTPPFQM-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R +DLRR  + +N++ R +    +R  +  E FI+  TP+L  S+PEGARD+LVP
Sbjct: 123 TRLTHRVMDLRRPYMQRNMMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM +G+DRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    + +++ VF++    +     F  + Y +A  R+G+DKPDLR  +    +T
Sbjct: 242 LNEEEIRAIFQRMIKEVFQQQLGVDL--GEFPTMTYQEAAHRFGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-----GGNRAFCDRMNEWARSQGQPGLAY 358
           +     +F+VFS   ++  G  V A+   GG     G +R   D   E+ +  G  GLAY
Sbjct: 300 DVMKDVDFKVFSGAANMKGG-RVVALRVPGGAREEGGLSRGEIDGYTEFVKIYGAKGLAY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
           I       G      P+ K+++      +  R   QDGD  FF A D  K  + A  A R
Sbjct: 359 IKVNDKAKGRDGLQSPIVKNIHDAALAEVLQRTGAQDGDLLFFGA-DKEKIVNDAIGALR 417

Query: 418 NHIAQ-ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
             +   E G  N    N +   W++DFP +E +EEE +    H+PFT P+ G E+L   D
Sbjct: 418 LKVGHSEFGKKNGLFENRWAPLWVVDFPMFEHDEEEDRWVAVHHPFTSPKDGHENLMDTD 477

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                A  YD+V NG+E+  G +R H ++V  + F+ + I  E    +FG L  A Q G 
Sbjct: 478 PGKCIAKAYDMVLNGWELGGGSVRIHRADVQAKVFAALNIGPEDQRAKFGYLLDALQYGA 537

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGG+A G+DR++ L+ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+  
Sbjct: 538 PPHGGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL-R 596

Query: 594 NP 595
           NP
Sbjct: 597 NP 598


>gi|325269911|ref|ZP_08136521.1| aspartate--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324987884|gb|EGC19857.1| aspartate--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 585

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/597 (37%), Positives = 343/597 (57%), Gaps = 26/597 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT++CG+L +SD G  V LSGWV R R  GG+ FLD+RD YGITQ+V N   D+A    
Sbjct: 2   YRTNTCGELRISDAGKEVTLSGWVQRSRKMGGMTFLDLRDRYGITQLVFNEADDAALCGE 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + + G V  R ++  N+ I TG IE+ A+++++LS +   P  +    +  
Sbjct: 62  ANKLGREYCIQVKGTVSERQSK--NSKIPTGDIEIIAKELKVLSPSLTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR+ + KN+  R R+   +R  + A+ FIE  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRREAVRKNLELRHRMTILIRNFLDAQQFIEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++N  E + R +F E            ++ + +A++R+G+DKPDLR  +    
Sbjct: 239 SFVDQDDVINLFEEMARHLFREIRGVEL--PRLEQMTWHEAMKRFGSDKPDLRFGMEFVE 296

Query: 302 VTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359
           + +    +  F VF++   +        +P       +   +  +   R Q G  GL +I
Sbjct: 297 LMDDLKGTGTFSVFNEADYIGG----IVVPGCADYSRKQLNELTDFVKRPQVGAQGLVFI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-----LKFCSFAA 414
            +  D +   +    + K       + ++     +DGD    ++GD      ++ CS   
Sbjct: 353 KYNADGTAKSS----IDKFYTPGQLQKVKETTGAKDGDLVLILSGDNANKTRVQLCSL-- 406

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  +   LG+ + N F   WI+DFP +EW++EE+++   H+PFTMP      L     
Sbjct: 407 --RLEMGNRLGLRDRNVFRCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHP 464

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YD VCNG E+  G +R H +++  + F  +G + E  E +FG L  AF+ G P
Sbjct: 465 EQVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAP 524

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PH G+A G+DR V +L G  ++R+   FP + +  D+++ +PS++  +QL EL +++
Sbjct: 525 PHAGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLEAPSSIDQKQLDELEIKL 581


>gi|260598340|ref|YP_003210911.1| aspartyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260217517|emb|CBA31699.1| Aspartyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 592

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 229/593 (38%), Positives = 341/593 (57%), Gaps = 11/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A  F +A 
Sbjct: 2   RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADAFSLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  + +N ++ TG++E+ A ++ I++ AE  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARDEKNVNRDMATGEVEVFATELTIINRAE--PLPLDSNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLIRQLWLDVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + EF VF+   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLLKNVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLDGINSPVAKFLNAEIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +L + +   +   W++DFP +E ++ E  +   H+PFT P+    + LK     ++ A  
Sbjct: 416 DLSLTDDAKWAPLWVIDFPMFE-DDGEVGLSAMHHPFTAPKDMSADELKAAPEEAV-ANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHRGEMQQTVFGILGINEQEQREKFGFLLDALKFGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+ +V+ 
Sbjct: 534 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFGNPTALAELGIEVVKK 586


>gi|284039033|ref|YP_003388963.1| aspartyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283818326|gb|ADB40164.1| aspartyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 589

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/594 (38%), Positives = 334/594 (56%), Gaps = 15/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEI 61
           RTH+CG+L ++D  +   L GWV  +R  GG++++D+RD YGITQ++          F  
Sbjct: 3   RTHTCGELRLADHNTTATLCGWVQTIRDKGGVLWIDLRDRYGITQLLLEDGQTAPELFTT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+  E+V+   G V+ R ++  N NI TG IEL    +E+L+ A+  P  +  E +  
Sbjct: 63  ARSLGREFVVKATGTVIERKSK--NPNIPTGDIELKVTSLEVLNPAKLPPFLIEDETDGG 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR+ + K++  R R+    R  M  ++FIE  TP+L  S+PEGARDF+
Sbjct: 121 DDLRMKYRYLDLRRNPVRKSLELRHRMAQQTRVYMDGQDFIEVETPVLIKSTPEGARDFV 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D EM
Sbjct: 181 VPSRMNPGEFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDCEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DILN  E ++R +F+     +  S    R+ Y DA++ YG+DKPD R  +    
Sbjct: 240 SFVEQEDILNMFEGLVRHLFKTVKGIDMAS--VPRMTYADAMKFYGSDKPDTRFGMEFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEW-ARSQ-GQPGLAY 358
           +   F   +          +    V  I A G     R   D + +W  R Q G  GL Y
Sbjct: 298 LKGTFDTVDMTSGKGFGVFDSAELVVGINAPGCAHYTRKQLDELTDWIKRPQIGAKGLIY 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  R +E G +     V K  +    +A       + GD    ++GD  K     ++ R 
Sbjct: 358 V--RYNEDGTLK--SSVDKFYSETELKAWAAHFGAKPGDLMLIVSGDCAKARKQLSELRL 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +   LG+ + N F   W++DFP  E+ EEE +    H+PFT P+     L   DL +++
Sbjct: 414 EMGSRLGLRDPNVFSTLWVLDFPLLEFGEEENRWFAMHHPFTSPKPEDIPLLDTDLGAVR 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG E+  G IR    ++  + FS +G S E  + +FG L  AF+ G PPHGG
Sbjct: 474 ANAYDLVINGTEVGGGSIRIFNRDLQARMFSILGFSDEEAKAQFGFLMDAFEFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IA G DR+  L  GA ++R+   FP + +  D+++ SPS +S  QL EL +  +
Sbjct: 534 IAFGFDRLCSLFGGADSIRDFIAFPKNNSGRDVMIDSPSAISQAQLNELKIATI 587


>gi|200390299|ref|ZP_03216910.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|199602744|gb|EDZ01290.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
          Length = 590

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 228/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L     EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  Y
Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEGAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKK 586


>gi|313888446|ref|ZP_07822113.1| aspartate--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845475|gb|EFR32869.1| aspartate--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 591

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 222/594 (37%), Positives = 349/594 (58%), Gaps = 16/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ C ++    +   V L GWV + R  G I+F+D+RD  GI Q+V +  S+    E A
Sbjct: 10  RTNYCNEISEDMISKEVVLMGWVAKQRSLGSIVFVDLRDRSGIAQIVFDDTSSEELLEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R E+V+ + G V  RS  +IN  + TG++E+ A +++ILS +E  P+ V       E
Sbjct: 70  SHLRGEFVIAVKGAVRMRS--SINEELETGRVEVLASELKILSESEVPPIYVKDNDNVAE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR LDLR+ ++ +N++ R++I    R       FIE  TP+LT  +PEGARD+LV
Sbjct: 128 NMRLKYRTLDLRKPSMQRNLMIRSKIYKITRDFFYENGFIEVETPMLTKPTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ  KQLLM +G DRY QI  CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRVNPGEFYALPQSPQLMKQLLMVAGMDRYIQITKCFRDEDLRANRQP-EFTQIDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++D++   E  L+ +F+E  N + +     R+ Y +A+ R+G DKPDLR  + + ++
Sbjct: 247 FVDEEDVMGINERFLQKLFKEVINKD-IELPIKRMKYSEAMDRFGVDKPDLRFGMELKDI 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E      F+VF    +   G  V  I   GG    ++    ++  + +     GL++I 
Sbjct: 306 SEIVKTCGFKVFEG--NTEKGKSVRGIKVDGGSEFYSKKQVKKLESFVKDYKAMGLSWI- 362

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+DE  +     P+AK L+    + I    + + GD    +A       S   + RN I
Sbjct: 363 -RVDEEID----SPIAKFLSEETMQEIISAFEAKKGDLILILADKNSVVFSGLGNLRNKI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++ +I+ + ++  WI +FP +E++EEE +    H+PFT P         +D  + +A 
Sbjct: 418 ARDMDLIDEDDYKLVWITEFPLFEYDEEEGRYVAMHHPFTSPLDEDVDKLVSDKENARAK 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR +  EV  + F  +G+S+E  + +FG L  AF+ G PPHGG+A
Sbjct: 478 AYDIVINGDEMGGGSIRINDPEVQEKMFEALGLSEEEAKEKFGFLLEAFKYGAPPHGGLA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+VML  GAK++R+V  FP +Q    LL G+P+ ++ +QL E+ ++++E+
Sbjct: 538 YGLDRLVMLFTGAKSIRDVIAFPKTQAATCLLTGAPTGLTEKQLEEVHIKVIED 591


>gi|212635158|ref|YP_002311683.1| aspartyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|226736544|sp|B8CNX7|SYD_SHEPW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|212556642|gb|ACJ29096.1| Aspartyl-tRNA synthetase [Shewanella piezotolerans WP3]
          Length = 593

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 229/602 (38%), Positives = 340/602 (56%), Gaps = 30/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  GI QVV +PD    FE+A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDMRDREGIVQVVYDPDLPEVFEVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE+ + I GLV +R    +NA++ TG+IE+   ++ +L+ +  LP+ +   +   E 
Sbjct: 62  SLRSEFCVQIKGLVRARPDSQVNADMRTGEIEILGLELTVLNSSAPLPINMDKNQHNTEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   IV R+++ +++R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMADRIVFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E + RG+F+E  + +     F R+ + +A+RRYG+DKPDLRNP+ + ++ 
Sbjct: 241 MTSEQVMAKTEEMTRGLFKELLDVDL--GEFPRMTFAEAMRRYGSDKPDLRNPLELIDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   +   G   V +IP  G   +R   D   ++    G  GLA++   
Sbjct: 299 DLVKEVEFAVFNGPANDPEGRVAVLSIPG-GAKLSRKQLDEYAKYVTIYGAKGLAWMKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             + G      PV K L     +A+  R   Q GD              F AD  N +A+
Sbjct: 358 DLDKGMEGIQSPVLKFLTEDVVKALLERTGAQTGDVIL-----------FGADKANVVAE 406

Query: 423 ELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKG 471
            +G +     E            W++DFP +E    +  +   H+PFT P     + L+ 
Sbjct: 407 AMGALRLKAGEDFDLLKGDWKPLWVVDFPMFE-RTSDGGLHAMHHPFTAPSNMTPAELEA 465

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           N   +I    YD+V NG E+  G +R H SE+    F  +GI+ E    +FG L  A + 
Sbjct: 466 NPTAAISD-AYDMVLNGCELGGGSVRIHNSEMQSAVFRILGINDEEANEKFGFLLEALRY 524

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPH G+A G+DRI+ML+ GA ++R+V  FP +      L  +P   +  QL ELG+ +
Sbjct: 525 GTPPHAGLAFGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLVELGVSV 584

Query: 592 VE 593
           +E
Sbjct: 585 IE 586


>gi|160875535|ref|YP_001554851.1| aspartyl-tRNA synthetase [Shewanella baltica OS195]
 gi|304408867|ref|ZP_07390488.1| aspartyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307302870|ref|ZP_07582625.1| aspartyl-tRNA synthetase [Shewanella baltica BA175]
 gi|189082141|sp|A9L3I1|SYD_SHEB9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|160861057|gb|ABX49591.1| aspartyl-tRNA synthetase [Shewanella baltica OS195]
 gi|304352688|gb|EFM17085.1| aspartyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306913230|gb|EFN43652.1| aspartyl-tRNA synthetase [Shewanella baltica BA175]
 gi|315267723|gb|ADT94576.1| aspartyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 592

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/597 (38%), Positives = 340/597 (56%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLIQVVYDPDLPEVFNVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + GLV +R    +N  + TG+IE+  Q + I++ A+ LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGLVRARPDSQVNGQMKTGEIEVLGQALTIINAADPLPLSMDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +S+R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLIFRAKVTSSVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + ++ 
Sbjct: 241 MSSEQVMAKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VFS   +   G  V A+   GG   +R   D   ++    G  GLA++   
Sbjct: 299 DLLKEVEFAVFSGPANDEEG-RVAALRIPGGAALSRKQIDDYTKFVGIYGAKGLAWMKIN 357

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            D S  + G+  PV K LN      I  R   Q GD   F A             R    
Sbjct: 358 -DLSLGLEGIQSPVLKFLNESIVNEIVSRTAAQTGDIILFGADQATVVAESMGALRLKAG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++  ++    +   W++DFP +E  +        H+PFT P+G     L+ N    +   
Sbjct: 417 EDFNLLQGE-WRPLWVVDFPMFE--KINGNFHAVHHPFTAPRGVTAAELEANPANRVSD- 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H  E+    F  +GI+ E  + +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +VE   K
Sbjct: 533 FGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVEKAVK 589


>gi|326318349|ref|YP_004236021.1| aspartyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323375185|gb|ADX47454.1| aspartyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 604

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 235/602 (39%), Positives = 348/602 (57%), Gaps = 18/602 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  + +G  V L+GWV+R R HGG+IF+D+RD  G  QVV +PD A  F+ A+
Sbjct: 4   RSHYCGLVTEALMGQTVTLAGWVNRRRDHGGVIFIDLRDREGNVQVVCDPDRADMFKTAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + I GLV +R   T N N+ +G+IE+   ++ +L+ +   P  +  E    E+
Sbjct: 64  GVRNEFCVQIKGLVRARPEGTTNDNLKSGKIEVLCHELNVLNPSVTPPFQMDDE-NLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + +N++ R +    +R  +  E FI+  TP+L  S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPYMQRNLMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM +G+DRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    + ++  VF+  +  +     F  + Y DA  R+G+DKPDLR  +    +T
Sbjct: 242 LGEEEIRAIFQRMVTEVFK--TQLDVDLGEFPIMTYQDAAFRFGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-----GGNRAFCDRMNEWARSQGQPGLAY 358
           +     +F+VFS   ++  G  V A+   GG     G +R   D   E+ +  G  GLAY
Sbjct: 300 DVMKDVDFKVFSGAANMQGG-RVVALRVPGGAREEGGLSRGEIDAYTEFVKIYGAKGLAY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
           I       G      P+ K+++      I  R   Q GD  FF A D LK  + A  A R
Sbjct: 359 IKVNDLAKGRDGLQSPIVKNIHDAAIAEILKRTGAQSGDLLFFGA-DKLKVVNDAIGALR 417

Query: 418 NHIAQ-ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
             I   E G  N    N +   W++DFP +E++E++ +    H+PFT P+ G E L   D
Sbjct: 418 LKIGHSEFGKKNGLFENVWAPLWVVDFPMFEYDEDDARWVAVHHPFTAPKDGHEDLMDTD 477

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                A  YD+V NG+E+  G +R H +EV  + F+ + ++ E    +FG L  A Q G 
Sbjct: 478 PGRCIAKAYDMVLNGWELGGGSVRIHRAEVQSKVFAALKLTPEDARAKFGYLLDALQYGA 537

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGG+A G+DR++ L+ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+  
Sbjct: 538 PPHGGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL-R 596

Query: 594 NP 595
           NP
Sbjct: 597 NP 598


>gi|127513007|ref|YP_001094204.1| aspartyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166225428|sp|A3QEP7|SYD_SHELP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|126638302|gb|ABO23945.1| aspartyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 592

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 224/605 (37%), Positives = 344/605 (56%), Gaps = 28/605 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F++A 
Sbjct: 2   RSHYCGDVNRSHVGEEVTLVGWVNRSRDLGGVVFLDLRDREGVIQVVYDPDLPEVFDVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+ + + GLV +R    IN  + TG+IE+  + + IL+ A  LP+ +   +   E 
Sbjct: 62  TLRSEFCVQVKGLVRARPDSQINDQMRTGEIEVLGKALTILNSAPALPINMDKNQHNTEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + I+ R+++ +++R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAERIIFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +++  E ++RG+F+E  N +     F ++ + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 241 MTSAQVMDKTEEMVRGLFKELLNVDL--GEFPKMTFAEAMRRYGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF +  + + G   V  +P  G   +R   D   ++    G  GLA++   
Sbjct: 299 DLVKDVDFKVFQEPANDSEGRVAVLCVPG-GASLSRKQLDEYGKYVNIYGAKGLAWMKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E+G      PV K L+    + I  R    +GD              F AD  N +A+
Sbjct: 358 ELENGLEGIQSPVLKFLSEEVVKGILERTGAANGD-----------LILFGADKANIVAE 406

Query: 423 ELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
            +G +     E            W++DFP +E    +  +   H+PFT P G   +    
Sbjct: 407 AMGALRLKVGEDFDLLQGDWKPLWVVDFPMFE-RTSDGGLHAMHHPFTAPSGITPAELEA 465

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D  +  +  YD+V NG E+  G +R + +E+    F  +GI+ E  + +FG L  A + G
Sbjct: 466 DPTAAISDAYDMVLNGCELGGGSVRIYDAEMQSAVFRILGINDEEAQEKFGFLLEALKYG 525

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPH G+A G+DR+VML+ GA ++R+V  FP +      L  +P   +  QL ELG+ +V
Sbjct: 526 TPPHAGLAFGLDRMVMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLEELGVSVV 585

Query: 593 ENPKK 597
           E  K+
Sbjct: 586 EAKKE 590


>gi|283785604|ref|YP_003365469.1| aspartyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282949058|emb|CBG88661.1| aspartyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 590

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/596 (38%), Positives = 340/596 (57%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L  S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN+ + TG+IE+ A  + I++ AE LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINSEMATGEIEVLASDLTIINRAESLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREVMEALVRNLWLEVKGVDL--GDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VFS   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFSGPAN-DPKGRVAALRVPGGASLSRKQIDDYGNFIKIYGAKGLAYIKVT 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGIEGITSPVAKFLNAEIVEAILQRTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAFQ 481
           +L + + + +   W++DFP +E ++ E  +   H+PFT P+    + LK     ++ A  
Sbjct: 416 DLNLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKEMTAAELKAAPEEAV-ANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  ++    F  +GI+++    +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+ +V+  +K
Sbjct: 534 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELGIEVVKKAEK 589


>gi|333030609|ref|ZP_08458670.1| aspartyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332741206|gb|EGJ71688.1| aspartyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 588

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 221/590 (37%), Positives = 340/590 (57%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEI 61
           +RTH+CG+L +SD+   V LSGWV R R  GG+ F+D+RD YGITQ+V N   D    + 
Sbjct: 2   FRTHTCGELRISDIEKVVTLSGWVQRSRKMGGMTFIDVRDRYGITQLVFNEASDKELCDR 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  RS++  N  I TG+IE+  +K+++L+ +   P  +  + +  
Sbjct: 62  ANKLGREFVIQVVGKVSERSSK--NDKIATGEIEILVEKLDVLNTSATPPFTIEEKTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  + KN+  R ++   +R  +  + F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRPNVRKNLELRHKMTMEVRRYLDNQGFLEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGEFYALPQSPQIFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D+++  E + + +F+    G  ++  F RI + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQEDVISNFEGMAKHLFKTI-RGIELTETFPRITWHDAMKYYGSDKPDLRFDMQFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      +    +  I  KG     R   D++ ++ +         ++
Sbjct: 298 LMDVLKGHGFGVF------DSAEYIGGICVKGAASYTRKQLDQLTDYVKRPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419
            R++  G+V     V K       + ++   + +  D    ++GD  +K      + R  
Sbjct: 352 ARVNADGSVK--SSVDKFYTQEVLQEMKAAFNAEPEDLILILSGDNCMKTRKQLCELRLK 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A ELG+ + N F   W++DFP +EW+EE+++    H+PFT P+        +D   ++A
Sbjct: 410 VADELGLRDKNKFACLWVIDFPLFEWDEEDERFVAVHHPFTSPKEEDIQYIDSDPGRVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H SE+  + F  +G + E  + +FG L  AFQ G PPHGGI
Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSELQNKMFEVLGFTPEKAKEQFGFLMNAFQYGAPPHGGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L     ++R+   FP + +  D+++ +P+ +   QL EL L
Sbjct: 530 AYGLDRWVSLFAELDSIRDCIAFPKNNSGRDVMIDAPAQLDPSQLDELHL 579


>gi|152966984|ref|YP_001362768.1| aspartyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189082102|sp|A6WCG5|SYD_KINRD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|151361501|gb|ABS04504.1| aspartyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 598

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 236/602 (39%), Positives = 330/602 (54%), Gaps = 24/602 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+ FLD+RD  G+ QVVA  +      A+ 
Sbjct: 3   RTHEAGSLRADHAGQTVTLTGWVARRRDHGGVAFLDLRDASGVVQVVARDEILDAGGARE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + I G V  R     NANI TG +E+    +E+LS A  LP  +       E  
Sbjct: 63  LRNEYCIRITGDVRLRPEGNDNANIPTGAVEVDTTALEVLSEAAPLPFQIDDHLNVGEEA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVP 183
           R K+R+LDLRR T   N +K     N     ++ E+ F E  TP LT S+PEGARDFLVP
Sbjct: 123 RLKHRYLDLRR-TGPANALKLRSAANRAARAVLEEHAFTEIETPTLTRSTPEGARDFLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R+  GS+YALPQ+PQ +KQLLM +G +RY+Q+A C+RDED R+DR P EF QLD+EMSF
Sbjct: 182 ARLAPGSWYALPQSPQLFKQLLMVAGMERYYQLARCYRDEDFRADRQP-EFTQLDIEMSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VEQDD++   E ++  +++    G+ V     R+ Y++A+RRYG+DKPDLR  + +    
Sbjct: 241 VEQDDVIALGEQIVAALWKLI--GHDVPLPLPRMTYEEAMRRYGSDKPDLRFGLELVECA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWR 362
             F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   
Sbjct: 299 GFFADTTFRVFQAPY-------VGAVVMPGGASQPRKTLDAWQEWAKQRGARGLAYVL-- 349

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + + G ++  GPVAK+L+      +   +    GD  FF AG      +    AR  IA+
Sbjct: 350 VGQDGELS--GPVAKNLSDTERAGLAAHVGANPGDCIFFAAGAVNPSRALLGAARAEIAR 407

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA-------HNPFTMPQGGMESLKGNDLL 475
             G I+ + + F W++D P ++   E+  +          H+ FT P+  +      D  
Sbjct: 408 RTGAIDESAWSFLWVVDAPMFKSAAEDDDVSIGEGSWNAVHHAFTAPKPEVVDTFDTDPG 467

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           S  +  YD+VCNG EI  G IR H  +V  + F+ +GIS+     +FG L  AF  G PP
Sbjct: 468 SALSNAYDIVCNGNEIGGGSIRIHRRDVQERVFAVMGISEADAREKFGFLLDAFSFGAPP 527

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G DR+V LL G  ++REV  FP S    D L  +P+ ++ +Q +E G+      
Sbjct: 528 HGGIAFGWDRVVALLAGVDSIREVIAFPKSGGGYDPLTAAPAPITAQQRKEAGVDAKPET 587

Query: 596 KK 597
           KK
Sbjct: 588 KK 589


>gi|294626868|ref|ZP_06705460.1| aspartyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292598882|gb|EFF43027.1| aspartyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 588

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 229/602 (38%), Positives = 348/602 (57%), Gaps = 23/602 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + +G++E+ A +I IL+ A   PLP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVSARHA--VNDKLRSGKVEVIATRISILNKAA--PLPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RR+G+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRFGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + +V E    S+F VF+   +   G  V A+   GG   +R   D     A   G  GLA
Sbjct: 296 LVDVAELVKASQFPVFTAAANDADG-RVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLA 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L E+G ++   P+AK  +  +  A+   +   +GD  FF AG   K   F    R
Sbjct: 355 YI--KLSETGEIS--SPIAKFFSEESFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476
               +E  +I  + +   W+ DFP +EW+EE ++    H+PFT P    +  L+ N   +
Sbjct: 411 LKAGKEFNLI-ADGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTA 469

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +    YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPH
Sbjct: 470 VSR-GYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   PK
Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV--RPK 586

Query: 597 KI 598
           ++
Sbjct: 587 QV 588


>gi|58581279|ref|YP_200295.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58425873|gb|AAW74910.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 614

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/595 (38%), Positives = 342/595 (57%), Gaps = 21/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 28  RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 87

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + TG++E+ A +I IL+ A   PLP     
Sbjct: 88  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRTGKVEVIATRISILNKAA--PLPFHAHE 143

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 144 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 203

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 204 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 262

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RRYG+DKPDLR  + 
Sbjct: 263 MEFAFVRERDVQDFVEDMMRAIFKEVVDVD-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 321

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + +V E    SEF VF+   +   G  V A+   GG   +R   D     A   G  GLA
Sbjct: 322 LVDVAELVKSSEFPVFTAAANDADG-RVAALRIPGGATLSRKQIDDYAAHAAKYGAKGLA 380

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L E+G V+   P+AK  +     A+   +   +GD  FF AG   K   F    R
Sbjct: 381 YI--KLSETGEVS--SPIAKFFSEEAFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALR 436

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476
               +E  ++    +   W+ DFP +EW+EE ++    H+PFT P    +  L+ N   +
Sbjct: 437 LKAGKEFDLV-AEGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTA 495

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +    YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPH
Sbjct: 496 VSR-GYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 554

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GGIA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++
Sbjct: 555 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV 609


>gi|317124706|ref|YP_004098818.1| aspartyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315588794|gb|ADU48091.1| aspartyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 595

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 234/599 (39%), Positives = 332/599 (55%), Gaps = 28/599 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+ FLD+RD  GI QVVA  +      A  
Sbjct: 3   RTHEAGTLRADHAGQTVTLTGWVARRRDHGGVAFLDLRDASGIAQVVARDEVLAQGGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E+ + + G V  R     N ++ TG+IE+   ++E+L+ +  LP  +       E  
Sbjct: 63  VRNEFCVRVTGDVRVRPEGNTNPDLPTGEIEVIVSELEVLNPSAPLPFQIDERVTVGEEA 122

Query: 125 RFKYRFLDLRR---DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           R K+R+LDLRR    +    I  R+++  + R  +   +F+E  TP LT S+PEGARDFL
Sbjct: 123 RLKHRYLDLRRPGASSAGSAIRLRSKVNAAARKVLGERDFVEIETPTLTRSTPEGARDFL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 183 VPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ D+L   E V+R +++    G  +   FL++ Y  A+ RYG+DKPDLR    + +
Sbjct: 242 SFVEQSDVLELGEAVVREIWKLI--GVDLEPPFLQMTYAQAMARYGSDKPDLRFGQELVD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360
            TE+F  + FRVF           V A+   GG    R   D   +WA+ +G  GLAY+ 
Sbjct: 300 CTEYFTDTPFRVFQSEY-------VGAVVMPGGASQPRKQLDAWQDWAKQRGAKGLAYVL 352

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D  G + G  PVAK+L       +   +  + GD+ FF AG      +    AR  I
Sbjct: 353 VQAD--GTLGG--PVAKNLTDAERAGLAAHVGAKPGDAVFFAAGPAKPSRALLGAARLEI 408

Query: 421 AQELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLK 470
            +   +I+ + + F W++D P +E   +     D A         H+ FT P+   E   
Sbjct: 409 GRRCDLIDESQWSFLWVLDAPLFEPAADATASGDVALGHSGWTAVHHAFTSPKKEFEDTF 468

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            +D  S  A+ YD+VCNG EI  G IR H  +V  + F  +GI  E  + +FG L  AFQ
Sbjct: 469 DSDPGSALAYAYDMVCNGNEIGGGSIRIHRRDVQERVFGVMGIGAEEAQEKFGFLLDAFQ 528

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            G PPHGGIA G DRIV LL   +++R+V  FP +    D L  +P+ ++ +Q +E G+
Sbjct: 529 YGAPPHGGIAFGWDRIVSLLARTESIRDVIAFPKTGGGYDPLTAAPAPITPQQRKEAGV 587


>gi|282880058|ref|ZP_06288779.1| aspartate--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281306072|gb|EFA98111.1| aspartate--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 586

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/595 (38%), Positives = 344/595 (57%), Gaps = 21/595 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEI 61
           YRT++CG+L +SDV   V LSGWV R R  GG+ F+D+RD YGITQ+V N   D+   E 
Sbjct: 2   YRTNTCGELRLSDVNKEVTLSGWVQRTRKMGGMTFVDLRDRYGITQLVFNEAADAKLCEQ 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + + G V  R ++  N  + TG IE+   ++ ILS +   P  +  E +  
Sbjct: 62  ANKLGREFCIQVKGTVSERQSK--NEKMPTGDIEILVSQLVILSESLTPPFKIEDETDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR T+ KN+  R R+   +R  +  E FIE  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRPTVRKNLELRHRMTILIRNFLDNEQFIEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   EN+ R +F+E   G  +     ++ + +A++R+G+DKPDLR  +    
Sbjct: 239 SFVDQEDVIGLFENLCRHLFKEI-RGVELPAKLQQMTWAEAMKRFGSDKPDLRFGMEFVE 297

Query: 302 VTEHFV-HSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357
           + +     ++F VF      N    +  I   G     R   D + E+ +    G  GL 
Sbjct: 298 LMDTLKGKADFSVF------NEAAYIGGICVPGCANYTRKQLDGLTEFVKRPQVGAKGLV 351

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADA 416
           YI  + +E G++     + K        A++ ++  +DGD    ++G+ P K        
Sbjct: 352 YI--KYNEDGSIK--SSIDKFYTQEQLLAVKEQMGAKDGDLVLILSGNQPNKTRVQLCAL 407

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  + + LG+ + N FE  WI+DFP +EW++EE+++   H+PFTMP      L       
Sbjct: 408 RLEMGERLGLRDKNKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPEK 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G +R H  ++  + F  +G + E    +FG L  AF+ G PPH
Sbjct: 468 VRAKAYDFVCNGIEVGGGSLRIHDGQLQAKMFEILGFTPEKAMAQFGFLINAFKYGAPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR V ++ G  ++R+   FP + +  D+++ +P+ +  +QL EL +++
Sbjct: 528 AGLAFGLDRFVSIMAGLDSIRDCIAFPKNNSGRDVMLDAPNCIDDKQLDELQIKL 582


>gi|153000827|ref|YP_001366508.1| aspartyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217973216|ref|YP_002357967.1| aspartyl-tRNA synthetase [Shewanella baltica OS223]
 gi|166225427|sp|A6WNQ6|SYD_SHEB8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781750|sp|B8EA71|SYD_SHEB2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|151365445|gb|ABS08445.1| aspartyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217498351|gb|ACK46544.1| aspartyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 592

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/597 (38%), Positives = 340/597 (56%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLIQVVYDPDLPEVFNVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + GLV +R    +N  + TG+IE+  Q + I++ A+ LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGLVRARPDSQVNGQMKTGEIEVLGQALTIINAADPLPLSMDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +S+R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLIFRAKVTSSVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + ++ 
Sbjct: 241 MSSEQVMAKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VFS   +   G  V A+   GG   +R   D   ++    G  GLA++   
Sbjct: 299 DLLKEVEFAVFSGPANDEEG-RVAALRIPGGAALSRKQIDDYTKFVGIYGAKGLAWMKIN 357

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            D S  + G+  PV K LN      I  R   Q GD   F A             R    
Sbjct: 358 -DLSLGLEGIQSPVLKFLNESIVNEIVSRTGAQTGDIILFGADQATVVAESMGALRLKAG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++  ++    +   W++DFP +E  +        H+PFT P+G     L+ N    +   
Sbjct: 417 EDFNLLQGE-WRPLWVVDFPMFE--KINGNFHAVHHPFTAPRGVTAAELEANPANRVSD- 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H  E+    F  +GI+ E  + +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +VE   K
Sbjct: 533 FGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVEKAVK 589


>gi|291543723|emb|CBL16832.1| aspartyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 587

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 225/594 (37%), Positives = 333/594 (56%), Gaps = 17/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH CG+  VS +G+   + G+V +VR  G ++F+D+RD  G+ Q+  N       F  A
Sbjct: 6   RTHFCGE--VSQIGTEAVVCGFVQKVRNLGTLLFIDLRDRTGVVQLAFNETQQPELFAKA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++ R E+VL   G V  R  E+IN ++  G +EL    + IL+ A+  P  +  + +  E
Sbjct: 64  ETCRGEYVLMAHGTVKER--ESINHDMKNGNVELVVDDLRILNKAQTPPFEITSDTKVNE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  L +N+V R +I  + R    A +FIE  TP++  S+PEGARD+L+
Sbjct: 122 ELRLKYRYLDLRRAPLQRNLVMRHQIAKAAREYFYANDFIEIETPMMMKSTPEGARDYLI 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ YKQLLM +G DRY Q+A CFRDED R+DR P EF Q+D+EMS
Sbjct: 182 PSRVHPGKFYALPQSPQIYKQLLMVAGMDRYIQLARCFRDEDLRADRQP-EFTQIDLEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +DIL   E  +  VF++   G  +     R+ Y +A+ R+G+DKPD R  + + ++
Sbjct: 241 FVDVEDILQMAEGFVHHVFQQVL-GREIPLPLPRLSYAEAMNRFGSDKPDTRYGMEIQDI 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E+     F VF+   ++  G  V AI AK   G   R   D++ E  +  G  GLA+I 
Sbjct: 300 SEYVKDCGFGVFTG--AIEAGGSVRAIVAKQAAGTLTRKEIDKLTEMVKGIGAKGLAFIR 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W  ++     G     K +       I   LD Q GD    +A             R  +
Sbjct: 358 WVEEKPSCSFG-----KFVGEDKLHEILQALDCQQGDVVLIVADKNKVTLPVLGALRQTV 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +I    F F WI   PF+EW+E+       H+PFTMP+        +    + A 
Sbjct: 413 ARKLDLIPEGQFNFLWITQMPFFEWDEDNNCWMAMHHPFTMPEDDCLQYLDSAPEKVIAK 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +DLV NG E++SG IR    E+  + F  +G++ E +E +FG L  A++ G PPHGG+ 
Sbjct: 473 AFDLVLNGTELSSGSIRITNYELQQKMFQALGLTDEEIEAKFGFLVEAYRFGAPPHGGMG 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+ M++LG  ++R+V+ FP  QN  +L+   PS V  E L  LG+ + E 
Sbjct: 533 IGLDRLAMVMLGVDSLRDVTAFPKVQNASELMSACPSAVDKENLDILGIAVTET 586


>gi|241661974|ref|YP_002980334.1| aspartyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240864001|gb|ACS61662.1| aspartyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 623

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/606 (38%), Positives = 343/606 (56%), Gaps = 22/606 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V LSGW HR R HGG+IF+D+RD  G+ QVV +PD    F++A+
Sbjct: 19  RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 78

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L + G+V +R   T NAN+ +G++E+   ++ +L+ +   P  +  +    E+
Sbjct: 79  GVRNEFCLQVKGVVRARPEGTTNANLTSGKVEVLCHELTVLNASVTPPFQL-DDDNLSET 137

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 138 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVP 197

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 198 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 256

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS----NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           + + +I +  E ++R VF+     NT+S      F  + + +A+ R+G+DKPDLR  +  
Sbjct: 257 LSEQEIRDLFEEMIRTVFK-----NTMSVELDAKFPVMEFREAMARFGSDKPDLRVKLEF 311

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358
             +T+     +F+VFS   +   G  V A+   GG   +R   D   ++    G  GLA+
Sbjct: 312 TELTDAMKDVDFKVFSGPANAEGG-RVVALRVPGGASLSRGDIDAYTKFVEIYGAKGLAW 370

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-- 416
           I       G      P+ K+L+      I  R   QDGD  FF A D  K  + A  A  
Sbjct: 371 IKVNEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGA-DRAKVVNDAMGALR 429

Query: 417 ----RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                +  A+  G+   + ++  W++DFP +E++EE+ +    H+PFT P+         
Sbjct: 430 LKVGHSDFAKSTGLFE-DAWKPLWVIDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLET 488

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D     A  YD+V NG+EI  G +R +  EV  + F  + I+ E    +FG L  A Q G
Sbjct: 489 DPGKCIAKAYDMVLNGWEIGGGSVRIYREEVQSKVFRALKINDEEARAKFGFLLDALQYG 548

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G+DR+V ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+ 
Sbjct: 549 APPHGGIAFGLDRVVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLR 608

Query: 593 ENPKKI 598
               K+
Sbjct: 609 AAEAKV 614


>gi|332292097|ref|YP_004430706.1| aspartyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170183|gb|AEE19438.1| aspartyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 585

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 225/592 (38%), Positives = 335/592 (56%), Gaps = 17/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60
           YRTH+ G L  +DV   V L+GWV + R  G II++D+RD YG+TQ+V +    D++  E
Sbjct: 2   YRTHNNGSLRAADVNKEVTLAGWVQKSRDKGFIIWVDLRDRYGMTQLVFDEERTDASIME 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +  E+V+   G V+ R ++  N NI TG IE+   K+E+L+ +   P  +  E + 
Sbjct: 62  QARKLGREFVIQATGTVIERDSK--NPNIATGDIEILVSKLEVLNASLTPPFTIEDETDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR  +  +++ R ++   +R  +  ++FIE  TP L  S+PEGARDF
Sbjct: 120 GEDVRMKYRYLDIRRKPVRDSLIFRHKVALEVRKYLSDQDFIEVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DILN  E + R + +E  NG  +   F R+ YDDA+R YG DKPD+R  +   
Sbjct: 239 MAFVEQEDILNIFEGLTRHLLKEV-NGVEIE-KFPRMLYDDAMRLYGNDKPDIRFGMEFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
            + E   H +F VF      N    V  I   GG    R   D++ +W +      L  +
Sbjct: 297 ELNEVAQHKDFGVF------NNAELVVGIAVPGGNSYTRKEIDKLIDWVKRPQVGALGMV 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R ++ G+      V K  +  +          Q GD    ++G+  K  +  +  R  
Sbjct: 351 YSRCNDDGSFK--SSVDKFYDQEDLAKWAAVTRAQKGDLICILSGETSKVRAQMSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A  LG+ +   F   W++DFP  E +EE       H+PFT P+ G   L       +KA
Sbjct: 409 LATRLGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQIELLDTKPGEVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H  E       ++G S+E  + +FG L  AF+ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKETQAIMLRHLGFSEEEAKAQFGFLMDAFEYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+V +L G + +R+   FP + +  D+++ +P+ +   Q++EL L++
Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAFLDDVQMKELNLKL 580


>gi|228471929|ref|ZP_04056698.1| aspartate--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276698|gb|EEK15406.1| aspartate--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 582

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/595 (38%), Positives = 339/595 (56%), Gaps = 21/595 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60
           YRTH+CG+L +S     V LSGWV R+R  G +I++D+RD YGITQ++ +    D A FE
Sbjct: 2   YRTHTCGELRLSHEKQQVTLSGWVQRIRNKGFMIWVDLRDRYGITQLIFDEERTDKAVFE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AK++  E V+ I G V+ R  E  N NI TG++E+    + +L+ +E  P  +    + 
Sbjct: 62  QAKTLSREDVIQIQGTVIKR--EAANTNIPTGEVEILVSALTLLNHSEIPPFTIEDNTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR  +  N++ R ++   +R  +  + FIE  TP+L  S+PEGARDF
Sbjct: 120 GEDLRMKYRYLDIRRTPVRDNLIFRHKVGMIVRNYLSGQGFIEVETPVLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNPGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI+ T E + + + +E          F R+ Y +A++ YG DKPD+R  +   
Sbjct: 239 MSFVEQEDIIQTFEGLAKHLLKELK--GLEFGAFPRMTYAEAMKTYGNDKPDIRFGMKFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357
            + +   H +F+VF      N    V  I   G     R   D + EW +    G  GL 
Sbjct: 297 ELNDIAQHRDFKVF------NEAELVVGIAVPGANSYTRKEIDTLVEWMKRPQIGATGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  + +E G+      V K  N  + +A   R   Q GD    ++G   K     +  R
Sbjct: 351 YV--KCNEDGSFK--SSVDKFYNEDDLKAWAERTGAQAGDLICILSGKANKVRGQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ LG+   + +   W++DFP  EW+EEE++    H+PFT P+     L  ++  ++
Sbjct: 407 MELAERLGLRKPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDSNPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG E+  G IR    E+  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 467 RANAYDLVLNGNEVGGGSIRIFNQELQAKMFELLGFTPEQAQAQFGFLMNAFKYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+A G DR+V LL G + +R+   FP + +  D+++ +PS +   QL+EL +++ 
Sbjct: 527 GLAFGFDRLVALLGGQETIRDFIAFPKNNSGRDVMIDAPSPIDEAQLKELAIQLA 581


>gi|300309541|ref|YP_003773633.1| aspartyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300072326|gb|ADJ61725.1| aspartyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 599

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 233/593 (39%), Positives = 343/593 (57%), Gaps = 10/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG    + +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F+ A+
Sbjct: 2   RTQYCGLTTEALLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRADVFKNAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+ L I GLV +R   T NAN+ +G+IE+   ++E+L+ +   P  +  +    E+
Sbjct: 62  SVRNEFCLRITGLVRNRPEGTTNANLKSGKIEVLCHELEVLNPSVTPPFQL-DDDSLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPQMQNNLRLRYKVAMEVRKFLDAQGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 181 SRVNAGEFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+   + + + N F  + +  A+ +YG+DKPD+R  +    +T
Sbjct: 240 LNEQEIRDLFEGMIRLVFKNALDID-LPNPFPVMDFATAMGKYGSDKPDMRVKLEFTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G  V      G    R+  D   ++    G  GLAYI    
Sbjct: 299 DVMKDVEFKVFSGAANSEGGRVVGLRVPGGAEMPRSEIDAYTQFVAIYGAKGLAYIKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422
              G      P+ K+++     AI  +   QDGD  FF A D  K  + A  A R  I  
Sbjct: 359 KAKGRDGLQSPIVKNIHDAALNAILEKTGAQDGDLIFFGA-DKAKVVNDAIGALRVKIGH 417

Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            E G  N    + +   W++DFP +E++E+ ++    H+PFT P+ G E     +  +  
Sbjct: 418 SEFGKKNGLFDDAWRPLWVVDFPMFEYDEDGQRWVALHHPFTSPKDGHEDFISTNPGAAI 477

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R H ++V  + F  + I  E  + +FG L  A Q G PPHGG
Sbjct: 478 AKAYDMVLNGWELGGGSVRIHRADVQSKVFRALKIDDEEAKLKFGFLLDALQYGAPPHGG 537

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IA G+DR+V ++ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+
Sbjct: 538 IAFGLDRLVTMMAGAESIRDVIAFPKTQRAQCLLTHAPSEVDEKQLRELHIRL 590


>gi|261821375|ref|YP_003259481.1| aspartyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261605388|gb|ACX87874.1| aspartyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 598

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 233/592 (39%), Positives = 344/592 (58%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F++A 
Sbjct: 2   RTNYCGQLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    IN ++ TG++E+ A  + I++ +E LPL     +   E 
Sbjct: 62  ELRNEFCIQLTGVVRARPESQINKDMATGEVEIFANALTIVNRSEALPLD--SNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLRR  + + +  R RI + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKFRYLDLRRPEMAQRLKTRARITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLVRELWLDVKGVDL--GDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V AI   GG   +R   D   ++    G  GLAYI   
Sbjct: 297 DLLKDIEFKVFSGPANDVKG-RVAAIRVPGGAQLSRKQIDEYGKFIEIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK L+     A+  R   QDGD  FF A D  K  + A  A R  + 
Sbjct: 356 ERAKGLEGVQSPVAKFLSEDVLSALLDRTAAQDGDILFFGA-DSAKVVTDALGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480
           ++L +   N +E  W++DFP +E  + E  +   H+PFT P+  + S L  N + +I A 
Sbjct: 415 RDLSLTKDNSWEPLWVVDFPMFE-EDGEGGLAAMHHPFTAPRDMLPSELSANPVAAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHRGEMQQTVFGILGITEQEQREKFGFLLDALKYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V
Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLEELAIAVV 584


>gi|300741587|ref|ZP_07071608.1| aspartate--tRNA ligase [Rothia dentocariosa M567]
 gi|300380772|gb|EFJ77334.1| aspartate--tRNA ligase [Rothia dentocariosa M567]
          Length = 592

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/597 (38%), Positives = 332/597 (55%), Gaps = 31/597 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAK 63
           RTH+ G+L  +++G  V L+GWV R R HGG+ F+D+RD  G+TQ V  N D   FE   
Sbjct: 3   RTHTNGELTAANIGETVTLTGWVARRRDHGGVAFVDLRDRAGVTQCVFHNEDD--FE--- 57

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+VL + G V  R     N N+ TG+IE+    +E+L+ A  LP  +    E  E 
Sbjct: 58  HLRNEYVLRVTGQVTRRPEGNENPNLATGEIEVEVSAVEVLNTAAPLPFQIDEHVEVGEE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR    + +  R+    + R  +  + ++E  TP LT S+PEGARDFLVP
Sbjct: 118 ARLRYRYLDLRRPEPARIMRLRSDANRAARNLLADDGYLEVETPTLTRSTPEGARDFLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R+  GS+YALPQ+PQ +KQLL   G ++Y+QIA C+RDED R+DR P EF QLD+E SF
Sbjct: 178 ARLAPGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQP-EFTQLDIEASF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+QDDI++  E ++  V+        +     R+ Y +A+ +YGTDKPDLR  + +  +T
Sbjct: 237 VDQDDIIDLGERIVEAVWNLID--VQIPRPIRRMTYTEAMEKYGTDKPDLRFGLELTELT 294

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWR 362
           ++F ++ FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   
Sbjct: 295 DYFANTTFRVFKAPY-------VGAVVMPGGASQPRRTLDAWQEWAKQRGAKGLAYVL-- 345

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G +   GPVAK++       +        GD  FF AG+  +  +    AR  I  
Sbjct: 346 VQEDGEL--TGPVAKNITDEERAGLAAATGANPGDCIFFAAGEAKQARALLGAARVEIGH 403

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQGGMESLKGN 472
             G+I    + F W++D P +E   E  +  D A         H+ FT P+         
Sbjct: 404 RTGLIKDGEWSFLWVVDAPLFESAAEATESGDVALGHSAWTAVHHAFTAPKPEFLDTFDK 463

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D  S  A+ YD+VCNG EI  G IR H  +V  + F+ +GI +E  + +FG L  AF+ G
Sbjct: 464 DPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFAVMGIGEEEAQEKFGFLLDAFKYG 523

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            PP GGIA G DRI+ LL G  ++REV  FP + N  D L  +P+ ++ +Q +E G+
Sbjct: 524 APPMGGIAFGWDRIISLLAGVDSIREVIAFPKTGNGYDPLTAAPAPITPQQRKEAGV 580


>gi|312199922|ref|YP_004019983.1| aspartyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311231258|gb|ADP84113.1| aspartyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 597

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/591 (38%), Positives = 331/591 (56%), Gaps = 23/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63
           R+H CGD  ++D G  V + GWV   R HG  + F+D+RD+ G+ Q V +          
Sbjct: 21  RSHRCGDPRLADAGETVTVCGWVAHRRQHGQSLQFIDLRDYSGVIQCVVDG-------TV 73

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122
            VRSE+VL I GLV  R   T+N  + TGQ+EL   K+E+LSVA+  P P+    +   E
Sbjct: 74  DVRSEYVLKITGLVTERPEGTVNEALATGQVELRDCKVEVLSVAKPPPFPLDDRADNVDE 133

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S R  +R+LDLRR+ + +N+  R+ ++ ++R  +    F+E  TP+L  S+PEGAR+F+V
Sbjct: 134 STRLTFRYLDLRRERMQRNLRIRSTVLAAIRTALSPLGFVEVETPLLMPSTPEGAREFIV 193

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   GSFYALPQ+PQ +KQLLM  G DRYFQ A C RDED R+DR   EF QLD+EMS
Sbjct: 194 PSRQFPGSFYALPQSPQLFKQLLMVGGADRYFQFARCLRDEDLRADRQ-YEFTQLDLEMS 252

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+Q D+L+ + + +    E  + G       +   +  A+ RYG DKPDLR  + +  +
Sbjct: 253 FVDQQDVLDVITSAVLAATEAITGGPVPPVETM--TWQHAMDRYGVDKPDLRFGMELVEL 310

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE F  S F+ F+ + +V  G  V   P      NR   D + + A+  G  GL ++  R
Sbjct: 311 TEVFAGSGFKAFAGVGAVK-GIRV---PGGSASHNRKALDTLTDTAKKLGAKGLVWM--R 364

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           +  +G +    PVAK L+      I  + + ++GD    +A +    C      RN + +
Sbjct: 365 VGAAGALE--SPVAKFLSEAELAGIVEKTEAREGDLLLLVADEWTTACEVLGQLRNSLGR 422

Query: 423 ELGIINCNCFEFCWIMDFP-FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
                    F F W++DFP F   ++E  +    H+PFT P          + L +++  
Sbjct: 423 PPA--GEGGFRFVWVVDFPQFVGIDKETGRPKPGHHPFTRPHPDDLDKLETEPLQVRSRA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+ SG IR H  E+  + F  +GIS+E  + RFG     F  G PPHGG A 
Sbjct: 481 YDLVLNGWELGSGSIRIHEPELQQRIFDLIGISREEADRRFGFFLTPFGYGAPPHGGFAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR+V  L G +N+REV  FP +Q+  D L G+P+ V   QL+ELG+R+V
Sbjct: 541 GIDRLVASLAGEENIREVIAFPKTQSGLDPLTGAPTRVDERQLKELGVRVV 591


>gi|300904750|ref|ZP_07122580.1| aspartyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|301304455|ref|ZP_07210567.1| aspartyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300403334|gb|EFJ86872.1| aspartyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300840306|gb|EFK68066.1| aspartyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|315257302|gb|EFU37270.1| aspartyl-tRNA synthetase [Escherichia coli MS 85-1]
          Length = 590

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 228/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELGIQVVKK 586


>gi|294665399|ref|ZP_06730687.1| aspartyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292604810|gb|EFF48173.1| aspartyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 588

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 229/602 (38%), Positives = 349/602 (57%), Gaps = 23/602 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + +G++E+ A +I IL+ A   PLP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIATRISILNKAA--PLPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RR+G+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRFGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + +V E    S+F VF+   +   G  V A+   GG   +R   D     A   G  GLA
Sbjct: 296 LVDVAELVKASQFPVFTAAANDADG-RVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLA 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L E+G ++   P+AK  +  +  A+   +   +GD  FF AG   K   F    R
Sbjct: 355 YI--KLSETGEIS--SPIAKFFSEESFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476
               +E  +I  + +   W+ DFP +EW+EE ++    H+PFT P    +  L+ N   +
Sbjct: 411 LKAGKEFNLI-ADGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTA 469

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPH
Sbjct: 470 V-SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   PK
Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV--RPK 586

Query: 597 KI 598
           ++
Sbjct: 587 QV 588


>gi|118443262|ref|YP_877922.1| aspartyl-tRNA synthetase [Clostridium novyi NT]
 gi|166225341|sp|A0PZX0|SYD_CLONN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|118133718|gb|ABK60762.1| aspartyl-tRNA synthetase [Clostridium novyi NT]
          Length = 593

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/592 (38%), Positives = 345/592 (58%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  S +G    + GWV R R  GG++F+D+RD  GI QVV   +     FE A
Sbjct: 10  RTVMCGELRESHIGQKHVVMGWVQRKRNLGGLVFVDLRDREGILQVVFGEEINKEAFEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             V+ E+ + ++G ++ R  E+ N  + TG +EL  Q I+ILS +E  P+ +  + +  E
Sbjct: 70  DLVKPEYCIAVEGELVRR--ESPNEAMPTGMVELKGQNIKILSESETPPIYIKEDLDTDE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + K    R +    +R  +    F+E  TP+LT S+PEGARD+LV
Sbjct: 128 AVRLKYRYLDLRRPDMQKIFKVRHKTAKVIRDFLDENGFLEMETPMLTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYPGMFYALPQSPQLFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQVDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +D++   E +++ VF+E +N + V     RI Y +A+ +YG+DKPDLR  + ++++
Sbjct: 247 FVDMEDVIALNEKLIQKVFKEVANVD-VQLPIQRITYKEAMDKYGSDKPDLRFGMEINDI 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           T+     +F+VF    ++  G  V AI A       R   D++ E+ ++    GLA+I +
Sbjct: 306 TDAVKDVDFKVFKD--AIENGGSVRAIKAPNCATMGRKQIDKLGEFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           + DE  +     P+AK L       +   LD + GD    +A  D +   S  A  R  +
Sbjct: 364 KEDEIKS-----PIAKFLGEEGINKVIESLDAKVGDLILIVADKDSVVLQSLGA-LRLEM 417

Query: 421 AQELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           A+ L I+  N  F F W+ +FP   +NEEE +    H+PFTMP         +D   ++A
Sbjct: 418 AKRLEILKDNKEFRFAWVTEFPLLSYNEEEDRYQAEHHPFTMPMDEDIEYLESDPGRVRA 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H +++  + F+ +G + E    RFG L  AF+ G PPHGG+
Sbjct: 478 KAYDIVLNGEELGGGSIRIHDTKLQEKMFNVLGFTSESAWERFGFLLEAFKFGPPPHGGL 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G DR++M L G +N+++V  FP +QN    L  +P+ V  +QL ELG+ +
Sbjct: 538 AYGFDRMIMFLAGTENIKDVIAFPKNQNAYCPLTEAPNVVDEKQLGELGIGV 589


>gi|282859635|ref|ZP_06268737.1| aspartate--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587553|gb|EFB92756.1| aspartate--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 585

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 224/593 (37%), Positives = 343/593 (57%), Gaps = 18/593 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT +CG+L ++D G  V LSGWV R R  GG+ F+D+RD YGITQ+V N   D+A    
Sbjct: 2   YRTKTCGELRLADTGKEVTLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEAEDAALCGE 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ +   G+V  R ++  N  I TG +E+  +++ +LS A   P  +    +  
Sbjct: 62  ANKLGREFCIQAKGIVNERQSK--NDKIETGDVEIIVKELNVLSPALTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR T+ KN+  R ++   +R  + A+NF+E  TPIL  S+PEGARDF+
Sbjct: 120 DELRMKYRYLDLRRATVRKNMELRHKMTIMIRNFLDAQNFMEVETPILIGSTPEGARDFI 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMIAGFDRYFQIAKCFRDEDLRADRQP-EFTQVDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++N  E + R +F E            ++ + +A++R+G+DKPDLR  +    
Sbjct: 239 SFVDQDDVINMFEEMCRVLFREIRGVEL--PKLEQMPWQEAMKRFGSDKPDLRFGMEFVE 296

Query: 302 VTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359
           + +    + EF VF++   +        +P       +   +  +   R Q G  GL +I
Sbjct: 297 LMDDLKGTGEFSVFNEANYIGG----IVVPNCAEYSRKQLNELTDFVKRPQVGAHGLVFI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADARN 418
            +  D S   +    + K  +    + ++     +DGD    ++G+ P K  +     R 
Sbjct: 353 KYGADGSVKSS----IDKFYSPEQLQKVKETTGAKDGDLVLILSGEKPNKVRTQLCSLRL 408

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP     SL       ++
Sbjct: 409 EMGDRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPADLSLLDEHPDQVR 468

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD VCNG E+  G IR H +++  + F  +G +KE  E +FG L  AF+ G PPH G
Sbjct: 469 ALAYDFVCNGIEVGGGSIRIHDTKLQERMFKELGFTKERAEEQFGFLMNAFKYGAPPHAG 528

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR V ++ G  ++R+   FP + +  D+++ +PS +  +QL EL +++
Sbjct: 529 LAFGLDRFVSIMAGLDSIRDCIAFPKNNSGRDVMLDAPSALDPKQLDELQIKL 581


>gi|121608304|ref|YP_996111.1| aspartyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|166225441|sp|A1WHI6|SYD_VEREI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|121552944|gb|ABM57093.1| aspartyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 604

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 238/605 (39%), Positives = 343/605 (56%), Gaps = 24/605 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG +  + +G  V L+GWV+R R HGG+IF+D+RD  G  QVV +P+    F+ A+
Sbjct: 4   RTHYCGLVTQALMGQTVTLAGWVNRRRDHGGVIFIDLRDREGHVQVVCDPEREQMFKTAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + GLV +R   + N  I +GQIE+    + +L+ +   P     E    E+
Sbjct: 64  GLRSEFCVQVTGLVRARPDGSSNDRIKSGQIEVLCHALNVLNPSV-TPAFQIDEENLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + +N++ R ++   +R  + A  FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPYMQRNLMLRYKVAMQVRNFLDANGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS---NNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +++ DI +  ++++  VF      NT+      F  + Y DA  RYG+DKPDLR  +   
Sbjct: 242 MQEQDIRDLFQDMIETVFR-----NTLGVDLGEFPVMTYQDATSRYGSDKPDLRVKLEFT 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEV-WAIPA---KGGGGNRAFCDRMNEWARSQGQPGL 356
            +T      +F+VFS    +  G  V   +P      GG +R   D   E+ +  G  GL
Sbjct: 297 ELTGVMKDVDFKVFSGAAGMKGGRVVGLRVPGGARDAGGLSRGEIDAYTEFVKIYGAKGL 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AYI       G      P+ K+L+      I  R   QDGD  FF A D  K  + A  A
Sbjct: 357 AYIKVNARARGRDGLQSPIVKNLHDAALTEILARTGAQDGDLIFFGA-DKEKIVNDAIGA 415

Query: 417 -RNHIAQ-ELGIINCNCFE----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
            R  I   E G  N   FE      W++DFP +E++E+ ++    H+PFT P+ G E   
Sbjct: 416 LRTKIGHSEFGKKN-GLFEERWAALWVVDFPMFEFDEQAQRYSAMHHPFTAPKDGHEDWM 474

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            +      +  YD+V NG+E+  G +R H ++V  + F  + I+ E    +FG L  A Q
Sbjct: 475 ASAPEKCISKGYDMVLNGWEMGGGSVRIHRADVQQKVFDALQITPEEARLKFGFLLDALQ 534

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGG+A G+DRIV L+ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R
Sbjct: 535 YGAPPHGGMAFGLDRIVTLMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIR 594

Query: 591 IVENP 595
           +  NP
Sbjct: 595 L-RNP 598


>gi|260912175|ref|ZP_05918729.1| aspartate-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260633702|gb|EEX51838.1| aspartate-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 586

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/597 (37%), Positives = 345/597 (57%), Gaps = 25/597 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61
           YRT +CG+L ++D G  V L+GWV RVR  GG+ F+D+RD YGITQ+V   N D    + 
Sbjct: 2   YRTSTCGELRLADAGKTVTLAGWVQRVRKMGGMSFVDLRDRYGITQLVFNENEDKELCDS 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + + G+V  R ++  NAN+ TG IE+ A ++ +LS ++  P  +    +  
Sbjct: 62  ANRLGREFCIQVTGVVNERQSK--NANLPTGDIEIIASQLNVLSESQTPPFTIEENTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  + KN+  R ++   +R  + +++FIE  TPIL  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRPNVRKNLELRHKMTILIRNFLDSKDFIEVETPILIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++N  E++ R +F+E   G  +    L++ + +A++ YG+DKPDLR  +    
Sbjct: 239 SFVDQDDVINLFEDMARHLFKEL-RGVELPAKLLQMPWHEAMKLYGSDKPDLRFGMEFVE 297

Query: 302 VTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           + +    + +F VF      N    +  I   G    +R   + + ++ +         +
Sbjct: 298 LADVLKGTGDFSVF------NEAEYIGGICVPGCADYSRKQLNELTDFVKRPQVGAKGLV 351

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-----LKFCSFAA 414
           F + +  G+V     + K  +      ++  +  +DGD    ++GD      ++ C+   
Sbjct: 352 FVKFEADGSVK--SSIDKFYSPEVFAQLKQAMGAKDGDLVLIMSGDKANKTRIQLCNL-- 407

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  +   LG+ + + FE  WI+DFP +EW++EE+++   H+PFTMP      L  +  
Sbjct: 408 --RLEMGDRLGLRDKDKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDDHP 465

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YD VCNG E+  G +R H   +  + F  +G + E    +FG L  AF+ G P
Sbjct: 466 ERVRALAYDFVCNGIEVGGGSLRIHDGALQEKMFGILGFTPERAMAQFGFLINAFKYGAP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PH G+A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL LRI
Sbjct: 526 PHAGLAFGLDRFVSIFAGLNSIRDCIAFPKNNSGRDVMLDAPSVIDDKQLEELNLRI 582


>gi|156933556|ref|YP_001437472.1| aspartyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|166225344|sp|A7MEB6|SYD_ENTS8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|156531810|gb|ABU76636.1| hypothetical protein ESA_01376 [Cronobacter sakazakii ATCC BAA-894]
          Length = 592

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 234/594 (39%), Positives = 342/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A  F +A 
Sbjct: 2   RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADAFSLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  + +N ++ TG++E+ A ++ I++ AE  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARDEKNVNRDMATGEVEVFATELTIINRAE--PLPLDSNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +    +     F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLIRQLWLDVKGVDL--GEFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK LN    EAI  R   QDGD  FF A D  K  + A  A R  + 
Sbjct: 356 ERAKGLDGINSPVAKFLNAEIVEAILERTGAQDGDMIFFGA-DHKKVVADALGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++L + +   +   W++DFP +E ++ E  +   H+PFT P+    E LK     ++ A 
Sbjct: 415 KDLSLTDEAKWAPLWVIDFPMFE-DDGEGGLSAMHHPFTAPKDMTAEELKAAPEDAV-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  E+    F  +GI++     +FG L  A + G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHRGEMQQTVFGILGINEHEQREKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+ +V+ 
Sbjct: 533 FGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELGIEVVKK 586


>gi|167585481|ref|ZP_02377869.1| aspartyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 600

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/601 (38%), Positives = 338/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQVKGLVRNRPEGTVNAGLKSGKIEVLCHELTVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDATFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVEFKVFSTPANAKDGRVAALRVPKGGELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   +DGD  FF A D  K  + +  A       
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++E+ +   AH+PFT P+         D    
Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+   E P
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598

Query: 596 K 596
           K
Sbjct: 599 K 599


>gi|78048842|ref|YP_365017.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|97197021|sp|Q3BQE6|SYD_XANC5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78037272|emb|CAJ25017.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 588

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 225/601 (37%), Positives = 344/601 (57%), Gaps = 21/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + +G++E+ A +I IL+ A   PLP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIATRISILNKAA--PLPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RRYG+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V E    S+F VF+       G     +   G   +R   D     A   G  GLAY
Sbjct: 296 LVDVAELVKASQFPVFTAAADDADGRVAALLIPGGASLSRKQIDEYAAHAAKYGAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +L E+G V+   P+AK  +  +  A+   +   +GD  FF AG   K   F    R 
Sbjct: 356 I--KLSETGEVS--SPIAKFFSEESFAALLKHVGASNGDIVFFGAGGYTKVSDFMGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSI 477
              ++  ++  + +   W+ DFP +EW++E ++    H+PFT P    +  L+ N   ++
Sbjct: 412 KAGKDFNLV-ADGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARTAV 470

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
               YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHG
Sbjct: 471 SR-GYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHG 529

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           GIA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   PK+
Sbjct: 530 GIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV--RPKQ 587

Query: 598 I 598
           +
Sbjct: 588 V 588


>gi|168234037|ref|ZP_02659095.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194469841|ref|ZP_03075825.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197249743|ref|YP_002146121.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|238690038|sp|B5F3I9|SYD_SALA4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|194456205|gb|EDX45044.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197213446|gb|ACH50843.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|205331971|gb|EDZ18735.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 590

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDEHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L     +AI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLDGINSPVAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  Y
Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKK 586


>gi|187927444|ref|YP_001897931.1| aspartyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|309779854|ref|ZP_07674609.1| aspartate--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|187724334|gb|ACD25499.1| aspartyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|308921431|gb|EFP67073.1| aspartate--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 623

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/606 (38%), Positives = 343/606 (56%), Gaps = 22/606 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V LSGW HR R HGG+IF+D+RD  G+ QVV +PD    F++A+
Sbjct: 19  RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 78

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L + G+V +R   T NAN+ +G++E+   ++ +L+ +   P  +  +    E+
Sbjct: 79  GVRNEFCLQVKGVVRARPEGTTNANLTSGKVEVLCHELTVLNASVTPPFQL-DDDNLSET 137

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 138 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVP 197

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 198 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 256

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS----NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           + + +I +  E ++R VF+     NT+S      F  + + +A+ R+G+DKPDLR  +  
Sbjct: 257 LSEQEIRDLFEEMIRTVFK-----NTMSVDLDAKFPVMEFREAMARFGSDKPDLRVKLEF 311

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358
             +T+     +F+VFS   +   G  V A+   GG   +R   D   ++    G  GLA+
Sbjct: 312 TELTDAMKDVDFKVFSGPANAEGG-RVVALRVPGGASLSRGDIDAYTKFVEIYGAKGLAW 370

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-- 416
           I       G      P+ K+L+      I  R   QDGD  FF A D  K  + A  A  
Sbjct: 371 IKVNEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGA-DRAKVVNDAMGALR 429

Query: 417 ----RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                +  A+  G+   + ++  W++DFP +E++EE+ +    H+PFT P+         
Sbjct: 430 LKVGHSDFAKSTGLFE-DAWKPLWVIDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLET 488

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D     A  YD+V NG+EI  G +R +  EV  + F  + I+ E    +FG L  A Q G
Sbjct: 489 DPGKCIAKAYDMVLNGWEIGGGSVRIYREEVQSKVFRALKINDEEARAKFGFLLDALQYG 548

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G+DR+V ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+ 
Sbjct: 549 APPHGGIAFGLDRVVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLR 608

Query: 593 ENPKKI 598
               K+
Sbjct: 609 AAEAKV 614


>gi|288928261|ref|ZP_06422108.1| aspartate--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288331095|gb|EFC69679.1| aspartate--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 586

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 225/597 (37%), Positives = 344/597 (57%), Gaps = 25/597 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61
           YRT +CG+L ++D G  V L+GWV RVR  GG+ F+D+RD YGITQ+V   N D    + 
Sbjct: 2   YRTSTCGELRLADAGKTVTLAGWVQRVRKMGGMSFVDLRDRYGITQLVFNENEDKELCDC 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + + G V  R ++  NAN+ TG IE+ A ++ +LS +E  P  +    +  
Sbjct: 62  ANRLGREFCIQVTGTVNERQSK--NANLATGDIEIIASQLNVLSESETPPFTIEENTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  + KN+  R ++   +R  + +++FIE  TPIL  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRPNVRKNLELRHKMTILIRNFLDSKDFIEVETPILIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++N  E++ R +F+E   G  +     ++ + +A++RYG+DKPDLR  +    
Sbjct: 239 SFVDQDDVINLFEDMARHLFKEL-RGVELPAKLRQMPWHEAMKRYGSDKPDLRFGMEFVE 297

Query: 302 VTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359
           + +    + EF VF++   +        +P       +   +  +   R Q G  GL ++
Sbjct: 298 LADVLKGTGEFSVFNEAEYIGG----ICVPGCADYSRKQLNELTDFVKRPQVGAKGLVFV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-----LKFCSFAA 414
            +  D S   +    + K  +      ++  +  +DGD    ++GD      ++ C+   
Sbjct: 354 KYETDGSVKSS----IDKFYSPEVFAQLKQVMGAKDGDLVLIMSGDKANKTRVQLCNL-- 407

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  +   LG+ + + FE  WI+DFP +EW++EE+++   H+PFTMP      L     
Sbjct: 408 --RLEMGDRLGLRDKDKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPEDVPLLDEHP 465

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YD VCNG E+  G +R H   +  + F  +G + E    +FG L  AF+ G P
Sbjct: 466 ERVRAQAYDFVCNGIEVGGGSLRIHDGALQEKMFGILGFTPERAMAQFGFLINAFKYGAP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PH G+A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL LR+
Sbjct: 526 PHAGLAFGLDRFVSIFAGLNSIRDCIAFPKNNSGRDVMLDAPSVIDDKQLEELNLRV 582


>gi|284921786|emb|CBG34859.1| aspartyl-tRNA synthetase [Escherichia coli 042]
          Length = 590

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 228/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + NP   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-NPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSLANPTALAELSIQVVKK 586


>gi|227510276|ref|ZP_03940325.1| aspartyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227189928|gb|EEI69995.1| aspartyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 595

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 229/601 (38%), Positives = 349/601 (58%), Gaps = 18/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT   G +    +G  V L GWV + R  GG+IF+++RD  GI Q+V + +       +A
Sbjct: 3   RTTYAGLVDDKLIGKEVVLKGWVQKRRDLGGLIFIELRDREGIVQLVFSEEFGKDALAVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R E+V+   G V++R+ + IN  + TG+IE+     +IL+V++  P  +       E
Sbjct: 63  DKLRGEYVVEAKGTVVARAPKEINPKMKTGKIEVDITDAKILAVSKTPPFYIEDGINVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++ KYR+LDLRR  +  NI+ R RII S+      E FI+  TP LT S+PEGARD+LV
Sbjct: 123 DLKLKYRYLDLRRPEMQYNILLRNRIIQSIHSFFDGEGFIDIETPTLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQQ+KQ+LM +GFD+Y+QIA C+RDED R DR P EF Q+DMEMS
Sbjct: 183 PSRVYPGSFYALPQSPQQFKQMLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQIDMEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +Q++I++  E  +  V ++ + G  V   F R+ +D+++ R+GTD+PD+R  + + ++
Sbjct: 242 FADQEEIMDVTEGFIAKVMKD-AMGKDVKLPFKRMDWDESMARFGTDQPDVRFGMELKDL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++     +F+VFS   +V  G +V AI   GG    +R   D+   +    G  GLA++ 
Sbjct: 301 SDIMKDVDFKVFSG--AVENGGQVKAIAVPGGADKYSRKDLDQFASYVERFGAKGLAWL- 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              D+S N    GP+AK     +  + I  + + + GD   F A +        A  R  
Sbjct: 358 KVTDDSFN----GPIAKFFKDADLRQKILDKAEAKPGDLLLFAADNSRIVADTLAYLRVE 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIK 478
           IA+E  +I+ + F F WI+++P + W+ + K+   AH+PFTMP +  +  L  +D    K
Sbjct: 414 IAKEQNMIDESKFAFLWIVNWPLFHWDVDLKRYVAAHHPFTMPNEEDVHYLLNDDEDPHK 473

Query: 479 AF--QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           A+   YD++ NG E+  G IR H  ++  + F  +G +KE  E +FG    A   G PPH
Sbjct: 474 AYAQSYDIILNGLELGGGSIRIHTRKLQERMFKALGFTKESAEAQFGYFLTALDYGFPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR V LL   +N+R+V  FP +    + L  +PS V+ +QL +LG+  VEN  
Sbjct: 534 GGLAIGLDRFVRLLADRENIRDVIAFPKNSKAVEPLTSAPSPVANKQLDDLGI-FVENQD 592

Query: 597 K 597
           K
Sbjct: 593 K 593


>gi|60681943|ref|YP_212087.1| aspartyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|81314992|sp|Q5LCK2|SYD_BACFN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|60493377|emb|CAH08163.1| aspartyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|301163382|emb|CBW22932.1| aspartyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 585

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           +RTH+CG+L +SDV   V+LSGWV R R  GG+ F+D+RD YGITQ+V N   D+   E 
Sbjct: 2   FRTHTCGELRISDVNKQVKLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEIDAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ I G V  R ++  N++I TG IE+   ++ IL+ A   P  +    +  
Sbjct: 62  ANKLGREFVIQIVGTVNERFSK--NSHIPTGDIEIIVSELNILNSAITPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  +  N+  R ++   +R  +    F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRSAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D++ T E + + +F+   N   ++  F R+ + +A+R YG+DKPD+R  +    
Sbjct: 239 SFVEQEDVITTFEGMAKHLFKVIRNIE-LTEPFPRMPWSEAMRLYGSDKPDIRFGMQFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G  G  R   D + E+ +         ++
Sbjct: 298 LMDILKGHGFSVFD-----NATY-IGGICAEGAAGYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  G V     V K       + ++     + GD    ++G D +K      + R  
Sbjct: 352 ARIEADGTVK--SSVDKFYTQEVLQQLKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   +  +++A
Sbjct: 410 MGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTNPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSQLQNKMFELLGFTPERAQEQFGFLMNAFKFGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L  G  ++R+   FP + +  D+++ +P+ +   QL EL L
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLEELNL 579


>gi|167752819|ref|ZP_02424946.1| hypothetical protein ALIPUT_01080 [Alistipes putredinis DSM 17216]
 gi|167659888|gb|EDS04018.1| hypothetical protein ALIPUT_01080 [Alistipes putredinis DSM 17216]
          Length = 585

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/595 (37%), Positives = 337/595 (56%), Gaps = 19/595 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61
           YRTH+CG L  ++V   V L+GWV +VR  G + F+D+RD YGITQ+V    S      +
Sbjct: 2   YRTHTCGQLRAANVNETVTLAGWVQKVRNLGAMTFIDLRDRYGITQIVVEEHSPADVKTV 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+VL ++G V+ RS++  N  + TG IE+ A K+ +L  AE  P  +    +  
Sbjct: 62  ADGLGREYVLQVEGRVVERSSK--NPKMPTGDIEVVASKLVVLHEAEVPPFTIEENSDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  L +N++ R ++   +R  +  E F+E  TP L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRPPLQRNMILRHKMAQEIRRFLSDEGFLEIETPYLVNSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++   FYALPQ+PQ  KQLLM +G+D+YFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMSPNQFYALPQSPQTLKQLLMVAGYDKYFQIVRCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D+L   E   + +F E   G  ++    R+ + +A+ +YG+DKPDLR  +   +
Sbjct: 239 SFVEQEDVLEIFERWAKHMFREVM-GIELTEPLRRMPWIEAMEKYGSDKPDLRFGMEFAD 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLAY 358
           +T+      F VF     V          A G  G  R   D + E+ + Q  G  GL +
Sbjct: 298 LTDLAQGHGFAVFDDAEYVT------GFAATGCAGYTRKQIDALTEFVKRQQIGAKGLVW 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  R++  GNV     V K  +     A+  R   + GD    + G   K  +     R 
Sbjct: 352 I--RVEADGNVK--SSVDKFYSPEQVRAMAERAGAKAGDLVLILCGKKFKTLTQLCALRL 407

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +AQ+LG+ +   F   W++DFP +EW++E ++    H+PFT P+        +D   ++
Sbjct: 408 EVAQQLGLRDPKKFAPLWVIDFPLFEWDDETQRYYAVHHPFTSPKLEDVQYLDSDPGRVR 467

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD VCNG EI  G IR H S++  + F  +G + E  + RFG L  AF+ G PPHGG
Sbjct: 468 ANAYDFVCNGTEIGGGSIRIHDSKLQAKMFELLGFTAEQAQERFGFLMNAFKYGAPPHGG 527

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +A G DR+  L  G++++R+   FP + N  D+++ +P  +   QL EL +++V+
Sbjct: 528 LAFGFDRLCSLFGGSESIRDYIAFPKNNNGRDMMLDAPGYIDQAQLDELHIQLVK 582


>gi|296101795|ref|YP_003611941.1| aspartyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295056254|gb|ADF60992.1| aspartyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 590

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/596 (38%), Positives = 339/596 (56%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L  S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + +NA++ TG IE+ A  + I++ AE LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNVNADMATGAIEVLASDLTIINRAEALPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++R ++ +         +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREVMEALVRSLWNDVKGVEL--GDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLVKSVEFAVFAGPAN-DPKGRVAALRVPGGAALSRKQIDDYGNFIKIYGAKGLAYIKVT 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGITSPVAKFLNAEIVEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAFQ 481
           +L + + + +   W++DFP +E ++ E  +   H+PFT P+    + LK     ++ A  
Sbjct: 416 DLNLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPEEAV-ANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHSGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+ +V+  +K
Sbjct: 534 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELGIDVVKKEEK 589


>gi|114563355|ref|YP_750868.1| aspartyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122299595|sp|Q081N5|SYD_SHEFN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|114334648|gb|ABI72030.1| aspartyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 591

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 224/603 (37%), Positives = 338/603 (56%), Gaps = 27/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S +G  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    FE+A 
Sbjct: 2   RSHYCGDINQSHLGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLKDVFEMAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+ + I G+V +R    IN+ + TG+IE+  +++ I++ +  LPL +   +   E 
Sbjct: 62  TLRSEFCVQIKGVVRARPESQINSQMKTGEIEILGKQLTIINASAPLPLSMDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAERLIFRAKVTSSVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F++  N +    +F R+ Y +A++RYG+DKPDLRNP+ + ++ 
Sbjct: 241 MSAEQVMEKTEQMMRGLFQDLLNVDL--GDFPRMTYAEAMKRYGSDKPDLRNPLELVDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D   ++A   G  GLA++    
Sbjct: 299 DLVKDVEFAVFNGPANDVEGRVAALRIPTGASLSRKQIDDYTKFAGIYGAKGLAWMKIND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PV K L       I  R   Q GD              F AD  N +A+ 
Sbjct: 359 LAAGMDGIQSPVLKFLTESIVNDIISRTGAQTGDIIL-----------FGADKANVVAEA 407

Query: 424 LGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           LG +     E            W++DFP +E  +        H+PFT P+G   +    D
Sbjct: 408 LGALRLKAGEDFKLLEGEWRPMWVVDFPMFE--KINGGFHAVHHPFTAPRGISPAELAAD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  +  YD+V NG E+  G +R H +E+    FS +GI  E  + +FG L  A + G 
Sbjct: 466 PAAAISDAYDMVLNGCELGGGSVRIHNAEMQSTVFSILGIEAEEAQEKFGFLLEALRYGT 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPH G+A G+DRI+ML+ GA ++R+V  FP +      L  +P   +  QL ELG+ ++E
Sbjct: 526 PPHAGLAFGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLTELGIAVIE 585

Query: 594 NPK 596
             K
Sbjct: 586 KVK 588


>gi|312912895|dbj|BAJ36869.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
          Length = 590

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + +NA++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDTKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L     EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNNKVVADALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  Y
Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEGAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  ++  L ELG+++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANLAALTELGIQVVKK 586


>gi|78067521|ref|YP_370290.1| aspartyl-tRNA synthetase [Burkholderia sp. 383]
 gi|97196577|sp|Q39D20|SYD_BURS3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|77968266|gb|ABB09646.1| aspartyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 600

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/601 (38%), Positives = 338/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + I GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQIKGLVRNRPEGTVNAGLKSGKIEVLCHELNVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRTNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDATFPVMPYSEAMARFGSDKPDLRVQLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KG   +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGSELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   +DGD  FF A D  K  + +  A       
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G+++   ++  W++DFP +E+++E+ +   AH+PFT P+         D    
Sbjct: 420 SEFGKANGLVHAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+   E P
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQP 598

Query: 596 K 596
           K
Sbjct: 599 K 599


>gi|288934601|ref|YP_003438660.1| aspartyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|290508802|ref|ZP_06548173.1| aspartyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|288889310|gb|ADC57628.1| aspartyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|289778196|gb|EFD86193.1| aspartyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 595

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/599 (38%), Positives = 337/599 (56%), Gaps = 17/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L  S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + INA++ TG IE+ A  + I++ +E LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRAREEKNINADMATGAIEVLASDLTIINRSESLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREIMEAMVRQLWLEIKGVDL--GDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKLIDEYGNFVKIYGAKGLAYIKVT 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L     EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGMDGINSPVAKFLTAEIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK---- 478
           +L + + + +   W++DFP +E ++ E  +   H+PFT P+     +  N+L +      
Sbjct: 416 DLSLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPK----DMTANELKAAPEEAV 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R H  ++    F  +GI+++    +FG L  A + G PPH G
Sbjct: 471 ANAYDMVINGYEVGGGSVRIHRGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++VE   K
Sbjct: 531 LAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALGELGIQVVEKEAK 589


>gi|134096004|ref|YP_001101079.1| aspartyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166225350|sp|A4G8X1|SYD_HERAR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|133739907|emb|CAL62958.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Herminiimonas arsenicoxydans]
          Length = 599

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 229/594 (38%), Positives = 341/594 (57%), Gaps = 12/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG    + +   V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 2   RTQYCGLTSEALLDQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRVDVFKAAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +VR+E+ L I G+V  R   T N+N+ +G+IE+ A ++E+L+ +   P  +  +    E+
Sbjct: 62  AVRNEFCLRITGIVRHRPEGTTNSNLTSGKIEVLAHELEVLNPSVTPPFQL-DDDNLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPQMQNNLRLRYKVTMEVRKFLDAQGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 181 SRVNAGHFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+   N   + N F  + Y  A+  YG+DKPD+R  +   ++T
Sbjct: 240 MNEQEIRDLFEGMIRLVFKNCLNVE-LPNPFPVMDYATAMGMYGSDKPDMRVKLEFTDLT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
                 EF+VFS   ++  G  V      GG   R+  D   ++    G  GLAYI    
Sbjct: 299 SIMKDVEFKVFSGAANMENGRVVGLRVPGGGAMPRSEIDAYTQFVAIYGAKGLAYIKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+++      I      QDGD  FF A D  K  + A  A       
Sbjct: 359 KAKGRDGLQSPIVKNIHDEALAKIIEATGAQDGDLIFFGA-DKAKVVNDAIGALRVKVGH 417

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   ++ G+ + + +   W++DFP +E++E+ ++    H+PFT P+ G E L   +    
Sbjct: 418 SDFGKKNGLFD-DEWRPLWVVDFPMFEYDEDSQRWSATHHPFTAPKDGHEDLMETNPGKC 476

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD+V NG+E+  G +R H +EV  + F  + IS E  + +FG L  A Q G PPHG
Sbjct: 477 LSKAYDMVLNGWELGGGSVRIHRAEVQSKVFRALKISAEEAQLKFGFLLDALQYGAPPHG 536

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+
Sbjct: 537 GLAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSEVDEKQLRELHIRL 590


>gi|153955740|ref|YP_001396505.1| aspartyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219856109|ref|YP_002473231.1| hypothetical protein CKR_2766 [Clostridium kluyveri NBRC 12016]
 gi|189082091|sp|A5N1Y8|SYD_CLOK5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781727|sp|B9E5P2|SYD_CLOK1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146348598|gb|EDK35134.1| AspS [Clostridium kluyveri DSM 555]
 gi|219569833|dbj|BAH07817.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 590

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/595 (37%), Positives = 357/595 (60%), Gaps = 23/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG L  +++G  + + GWV R R  GG++F+D+RD  GI Q+V     +   FE +
Sbjct: 10  RTCMCGGLTEANIGDKITVMGWVQRKRNLGGLVFVDLRDRTGILQIVFGEAINKEAFEKS 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SV+SE+ +   G ++ R  E+ N  I TG +EL  + I+I S +E  P+ +    +  E
Sbjct: 70  DSVKSEYCIAAVGTIVKR--ESPNMEIPTGMVELKGEYIKIFSESETPPIYIKENLDAAE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR KYR+LDLRR  + +  + R +    +R  +  + F+E  TPIL  S+PEGARD+LV
Sbjct: 128 NIRLKYRYLDLRRPDMQRIFMLRHKTAKVIRDFLDEQGFLEIETPILGKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G +YALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYKGKYYALPQSPQLFKQLLMVSGYDRYFQIAKCFRDEDLRANRQP-EFTQVDMEIS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+Q+++++  E +++ VF++  + + V     R+ Y  A+ +YG+DKPDLR  + ++++
Sbjct: 247 FVDQEEVMDLNERLIQRVFKQILDVD-VKLPIERMTYKTAMDKYGSDKPDLRFGMEINDI 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           +E     +F+VF   L    G  V AI   G     R   D++ E+ ++ G  GL ++ +
Sbjct: 306 SEVVKGVDFKVFQNALE--NGGSVRAIKVTGSAALGRKQLDKLVEFVKTYGASGLIWMAY 363

Query: 362 RLDESGNVAGMG-PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
           + +      G+   ++K L   +T+ I  +++  +GD    +A  + + F S  A  R H
Sbjct: 364 KKE------GIKCSISKFLTEEDTQNILNKMEAAEGDLILIVADKNKVVFESLGA-LRIH 416

Query: 420 IAQELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSI 477
           +A++ GI+  N  F+F WI +FP   +NEEE +    H+PF MP    ++ L+ N    +
Sbjct: 417 MAKQTGILEGNNDFKFVWITEFPLLSYNEEENRYQAEHHPFVMPMDEDIQYLESNP-EKV 475

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H +++  + F  +GISK+   N+FG    A + G PPHG
Sbjct: 476 RAKAYDIVLNGEELGGGSIRIHDTKLQEKMFGAIGISKDTAWNKFGYFLEALKFGPPPHG 535

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G DR++M L G  N+++V  FP +QN FC  L  +P++V   QL++LG+ +
Sbjct: 536 GLAYGFDRMIMFLAGTDNIKDVIAFPKNQNAFCP-LTEAPNSVDKSQLKDLGIEV 589


>gi|120437415|ref|YP_863101.1| aspartyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117579565|emb|CAL68034.1| aspartyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 586

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 219/595 (36%), Positives = 348/595 (58%), Gaps = 23/595 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61
           YR+H+CG+L    +G+ V LSGWV +VR  G +I++D+RD YG+TQ++ + + +  ++  
Sbjct: 6   YRSHTCGELNAQQIGNKVTLSGWVQKVRNKGFMIWVDLRDRYGLTQLIFDEERSSKKLMD 65

Query: 62  -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A S+  E+V+ ++G V+ R  E+ N NI TG+IE+  +  +IL+ ++  P  +  + + 
Sbjct: 66  KAGSLAREFVIQVEGTVIER--ESKNPNIATGEIEVLVEDFKILNSSKTPPFTIEDDTDG 123

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR+ +   ++ R ++   +R  +  E FIE  TP L  S+PEGARDF
Sbjct: 124 GEDLRMKYRYLDIRRNPVKNKLMFRHQVGMKVRNFLSNEGFIEIETPYLIKSTPEGARDF 183

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 184 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 242

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FV+Q+DILN  E++ R + ++    +     F R+ YDDA+++YG DKPD+R  +   
Sbjct: 243 MAFVDQEDILNIFESLTRHLLKDIKGVDVAE--FPRMTYDDAMKKYGNDKPDIRFGMEFA 300

Query: 301 NVTEHFVHSEFRVFSK---ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + +   +  F VF +   ++ +       A+P       R   D++  W + + Q G  
Sbjct: 301 ELDDIAKNKGFNVFDQQELVVGI-------AVPG-AASFTRKEIDKLISWVK-RPQVGAN 351

Query: 358 YIFW-RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            + W + +E G +     V K  +    +        + G+    +AGD  K  +  +  
Sbjct: 352 GLVWAKYNEDGTLK--SSVDKFYSQDALKNWAEATGAKPGNLILVMAGDAAKTRTQLSAL 409

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R H+  ELG+   + F   W++DFP  EW+EE ++    H+PFT P+    +L  ++   
Sbjct: 410 RMHLGNELGLRKADEFAPLWVVDFPLLEWDEETERFHAMHHPFTSPKKEDFALLESEPGK 469

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YDLV NG EI  G IR H  E   Q F  +G + E  + +FG L  AFQ G PPH
Sbjct: 470 VRANAYDLVLNGNEIGGGSIRIHDKETQSQMFKYLGFTPEEAKEQFGFLMDAFQYGAPPH 529

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GGIA G DR+V +L G +++R+   FP + +  D+++ +P+ +  +QL +L LR+
Sbjct: 530 GGIAFGFDRLVAILGGQESIRDFIAFPKNNSGRDVMIDAPAKLDEQQLSDLHLRL 584


>gi|28897821|ref|NP_797426.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260361820|ref|ZP_05774837.1| aspartate--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260876981|ref|ZP_05889336.1| aspartate--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260898718|ref|ZP_05907214.1| aspartate--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260901355|ref|ZP_05909750.1| aspartate--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|31076997|sp|Q87QV2|SYD_VIBPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|28806034|dbj|BAC59310.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308089517|gb|EFO39212.1| aspartate--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308093916|gb|EFO43611.1| aspartate--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308109585|gb|EFO47125.1| aspartate--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308113340|gb|EFO50880.1| aspartate--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328473206|gb|EGF44054.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 592

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 233/597 (39%), Positives = 342/597 (57%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPESQVNKDMATGEVEILAKGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    E ++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVTEKMVREMWQELLNVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V  I   GG    R   D   E+    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            D +  V G+  PVAK L+      I  R   + GD   F A             R  + 
Sbjct: 356 -DRAAGVEGIQSPVAKFLSEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++LG+     +   W++DFP +E  ++E  +   H+PFT P G   E LK N  ++  + 
Sbjct: 415 KDLGLTKEGTWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVTAEELKANPAVA-NSN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI  E  + +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQAAVFDILGIDAEEQQLKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +     K
Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSIANPAALEELAIAVTAAKAK 589


>gi|253565618|ref|ZP_04843073.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251945897|gb|EES86304.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_2_5]
          Length = 585

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           +RTH+CG+L +SDV   V+LSGWV R R  GG+ F+D+RD YGITQ+V N   D+   E 
Sbjct: 2   FRTHTCGELRISDVNKQVKLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEIDAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ I G V  R ++  N++I TG IE+   ++ IL+ A   P  +    +  
Sbjct: 62  ANKLGREFVIQIVGTVNERFSK--NSHIPTGDIEIIVSELNILNSAITPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  +  N+  R ++   +R  +    F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRSAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D++ T E + + +F+   N   ++  F R+ + +A+R YG+DKPD+R  +    
Sbjct: 239 SFVEQEDVITTFEGMAKHLFKVIRNIE-LAEPFPRMPWSEAMRLYGSDKPDIRFGMQFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G  G  R   D + E+ +         ++
Sbjct: 298 LMDILKGHGFSVFD-----NATY-IGGICAEGAAGYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  G V     V K       + ++     + GD    ++G D +K      + R  
Sbjct: 352 ARIEADGTVK--SSVDKFYTQEVLQQLKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   +  +++A
Sbjct: 410 MGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTNPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSQLQNKMFELLGFTPERAQEQFGFLMNAFKFGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L  G  ++R+   FP + +  D+++ +P+ +   QL EL L
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLEELNL 579


>gi|332876626|ref|ZP_08444386.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332685459|gb|EGJ58296.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 582

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/595 (38%), Positives = 338/595 (56%), Gaps = 21/595 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60
           YRTH+CG+L +S     V LSGWV RVR  G +I++D+RD YGITQ++ +    D A FE
Sbjct: 2   YRTHTCGELRLSHENQQVTLSGWVQRVRNKGFMIWVDLRDRYGITQLIFDEERTDKAVFE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AK++  E V+ I G V+ R  E  N NI TG++E+    + +L+ +E  P  +    + 
Sbjct: 62  KAKTLSREDVIQIQGTVIKR--EAANTNIPTGEVEILVTALTLLNHSELPPFTIEDNTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR  +  N++ R ++   +R  +  + FIE  TP+L  S+PEGARDF
Sbjct: 120 GEDLRMKYRYLDIRRTPVRDNLIFRHKVGIMVRNYLSEQGFIEVETPVLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNPGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI+ T E + + + +E          F R+ Y +A++ YG DKPD+R  +   
Sbjct: 239 MSFVEQEDIIQTFEGLAKHLLKELK--GLEFGAFPRMTYAEAMKTYGNDKPDIRFGMKFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357
            + +   H +F+VF      N    V  I   G     R   D + EW +    G  G+ 
Sbjct: 297 ELNDLAQHRDFKVF------NEAELVVGIAVPGANSYTRKEIDALVEWVKRPQVGASGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  + +E G       V K  N  + +A   R   Q GD    ++G   K     +  R
Sbjct: 351 YV--KCNEDGTFK--SSVDKFYNEDDLKAWAERTGAQAGDLICILSGKANKVRGQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ LG+   + +   W++DFP  EW+EEE++    H+PFT P+     L  ++  ++
Sbjct: 407 MELAERLGLRKPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDSNPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG E+  G IR    E+  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 467 RANAYDLVLNGNEVGGGSIRIFNQELQAKMFELLGFTPEQAQAQFGFLMNAFRYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+A G DR+V LL G + +R+   FP + +  D+++ +PS +   QL+EL +++ 
Sbjct: 527 GLAFGFDRLVALLGGQETIRDFIAFPKNNSGRDVMIDAPSPIDDAQLKELSIQLA 581


>gi|207742315|ref|YP_002258707.1| aspartyl-trna synthetase (aspartate--trna ligase)(asprs) protein
           [Ralstonia solanacearum IPO1609]
 gi|206593703|emb|CAQ60630.1| aspartyl-trna synthetase (aspartate--trna ligase)(asprs) protein
           [Ralstonia solanacearum IPO1609]
          Length = 607

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/599 (38%), Positives = 340/599 (56%), Gaps = 22/599 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V LSGW HR R HGG+IF+D+RD  G+ QVV +PD    F++A+
Sbjct: 4   RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L + G+V +R   T N N+ +G++E+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCLQVKGIVRARPEGTTNPNLASGKVEVLCHELTVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS----NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           + + +I +  E ++R VF+     NT+S      F  + + +A+ R+G+DKPDLR  +  
Sbjct: 242 LGEQEIRDLFEEMIRTVFK-----NTMSVELDATFPVMEFREAMARFGSDKPDLRVKLEF 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358
            +VT+     +F+VFS   +   G  V A+   GGG  +R   D   ++    G  GLA+
Sbjct: 297 TDVTDVMKDVDFKVFSNPANAEGG-RVVALRVPGGGALSRGDIDAYTKFVEIYGAKGLAW 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-- 416
           I       G      P+ K+L+      I  R   QDGD  FF A D  K  + A  A  
Sbjct: 356 IKVNEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGA-DRAKVVNDAMGALR 414

Query: 417 ----RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                +   +  G+   + ++  W++DFP +E++EE+ +    H+PFT P+         
Sbjct: 415 LKIGHSEFGKSTGLFE-DAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHREYLET 473

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D     A  YD+V NG+EI  G +R    EV  + F  + I +E    +FG L  A Q G
Sbjct: 474 DPGKCIAKAYDMVLNGWEIGGGSVRIFQEEVQSKVFRALKIGEEEARAKFGFLLDALQYG 533

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            PPHGGIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+
Sbjct: 534 APPHGGIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL 592


>gi|152970927|ref|YP_001336036.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238895442|ref|YP_002920177.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|262041982|ref|ZP_06015164.1| aspartate-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330001138|ref|ZP_08303905.1| aspartate--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|166225351|sp|A6TB35|SYD_KLEP7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150955776|gb|ABR77806.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238547759|dbj|BAH64110.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259040680|gb|EEW41769.1| aspartate-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328537784|gb|EGF63983.1| aspartate--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 595

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/596 (38%), Positives = 336/596 (56%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L  S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + INA++ TG IE+ A  + I++ +E LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRAREEKNINADMATGAIEVLASDLTIINRSESLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +     F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREIMEAMVRQLWLEVKGVDL--GEFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKLIDEYGNFVKIYGAKGLAYIKVT 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L     EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGMDGINSPVAKFLTAEIVEAILDRTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +L + + + +   W++DFP +E ++ E  +   H+PFT P+    + LK     ++ A  
Sbjct: 416 DLSLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTADELKAAPEEAV-ANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHRGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++VE   K
Sbjct: 534 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALGELGIQVVEKEAK 589


>gi|83720369|ref|YP_441117.1| aspartyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167579867|ref|ZP_02372741.1| aspartyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
 gi|167617942|ref|ZP_02386573.1| aspartyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257140221|ref|ZP_05588483.1| aspartyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|97196581|sp|Q2T132|SYD_BURTA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|83654194|gb|ABC38257.1| aspartyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 600

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 235/600 (39%), Positives = 337/600 (56%), Gaps = 12/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQVKGLVRNRPEGTVNAGLKSGKIEVLCHELTVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KG    R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGAELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422
              G      P+ K+L+  +  AI  R   QDGD  FF A D  K  + +  A R  I  
Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIVFF-AADRAKVVNDSLGALRLKIGH 419

Query: 423 -ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            E G  N    + ++  W++DFP +E+++EE +   AH+PFT P+         D     
Sbjct: 420 SEFGKANGLVESGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCL 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENPK 596
           IA G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+   E PK
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQPK 599


>gi|161523754|ref|YP_001578766.1| aspartyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189351485|ref|YP_001947113.1| aspartyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|238687025|sp|A9AFC7|SYD_BURM1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|160341183|gb|ABX14269.1| aspartyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189335507|dbj|BAG44577.1| aspartyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 600

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/594 (38%), Positives = 336/594 (56%), Gaps = 12/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQVKGLVRNRPEGTVNAGLKSGKIEVLCHELNVLNPSITPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   N   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTINVE-LDAKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KG   +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGAELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   +DGD  FF A D  K  + +  A       
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++E+ +   AH+PFT P+        +D    
Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLESDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  +V  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREDVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRL 592


>gi|281424426|ref|ZP_06255339.1| aspartate--tRNA ligase [Prevotella oris F0302]
 gi|281401695|gb|EFB32526.1| aspartate--tRNA ligase [Prevotella oris F0302]
          Length = 585

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/606 (36%), Positives = 347/606 (57%), Gaps = 44/606 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT++CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   D    + 
Sbjct: 2   YRTNTCGELRLSDAGKEVVLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEADDRMLCDN 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + + G+V  R ++  N+ I TG IE+ A+++++LS +   P  +  E +  
Sbjct: 62  ANKLGREYCIQVKGIVSERQSK--NSKIATGDIEILAKELKVLSPSLTPPFTIEDESDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR+ + KN+  R R+   +R  + + +F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRNVVRKNLELRHRMTILIRNFLDSHDFMEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++N  E + R +F+E            ++ + +A++R+G+DKPDLR  +    
Sbjct: 239 SFVDQDDVINMFEEMARHLFKEIRGVELPK--LQQMTWHEAMKRFGSDKPDLRFGMEFVE 296

Query: 302 VTEHFV-HSEFRVFSKILSVN----PGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQP 354
           + E F     F VF +   +     PG   ++         R   + + ++ +    G  
Sbjct: 297 LKEAFAGKGNFSVFDEATYIGGICVPGCADYS---------RKQLNELTDFVKKPQVGAK 347

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTE----AIRVRLDMQDGDSCFFIAGDP---- 406
           GL +I +  D        G +   ++   TE     I+  +   DGD    ++GD     
Sbjct: 348 GLVFIKYNTD--------GTIKSSIDKFYTEDELKEIKKLMGANDGDLVLILSGDNANKT 399

Query: 407 -LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
            ++ C+     R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP   
Sbjct: 400 RVQLCAL----RLEMGNRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPD 455

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
              L       ++A  YD VCNG E+  G +R H +++  + F  +G +KE  E +FG L
Sbjct: 456 DIPLLDEHPEQVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTKERAEAQFGFL 515

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             AF+ G PPH G+A G+DR V +  G  ++R+   FP + +  D+++ +P  +  +QL 
Sbjct: 516 MNAFKYGAPPHAGLAFGLDRFVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPGELDQKQLD 575

Query: 586 ELGLRI 591
           EL +++
Sbjct: 576 ELQIKL 581


>gi|300717088|ref|YP_003741891.1| Aspartyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299062924|emb|CAX60044.1| Aspartyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 596

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 229/594 (38%), Positives = 344/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG + +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F++A 
Sbjct: 2   RTDYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQEAFKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  +  N+++ TG++E+ A  + I++ +E  PLP+       E 
Sbjct: 62  ELRNEFCIQLTGTVRARDDKNKNSDMATGEVEIFATDLTIINRSE--PLPLDSNHANTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPDMAQRLKTRAKISSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++++    +    NF  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREIMEQLVRELWQDVKGVDL--GNFPMMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VFS   + +    V A+   GG    R   D   ++ +  G  GLA++   
Sbjct: 297 DLLKDVEFNVFSGPAN-DAKSRVAALRVPGGEKLTRKQIDEYTDFVKIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK L     EAI  R +  DGDS FF A D  K  + A  A R  + 
Sbjct: 356 ERAKGLEGVTSPVAKFLTADIVEAILARTNAADGDSIFFGA-DSAKVVADALGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAF 480
           ++L I   N +   W++DFP +E  + E  +   H+PFT P+    E LK     +I A 
Sbjct: 415 RDLDITTGNAWAPLWVVDFPMFE-EDGEGGLSAMHHPFTAPKDMTPEELKSIPETAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +++    F  +GI+++    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHNTQMQQTVFGILGITEQEQREKFGFLLDALKYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+VMLL G  N+R+V  FP +     L+  +P+  +   L ELG+ +++ 
Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPNFANPASLSELGIEVMKK 586


>gi|56413180|ref|YP_150255.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362106|ref|YP_002141743.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|62287526|sp|Q5PMZ6|SYD_SALPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238690744|sp|B5BH54|SYD_SALPK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56127437|gb|AAV76943.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197093583|emb|CAR59046.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 590

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 228/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L     EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  Y
Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+ +V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIPVVKK 586


>gi|168241530|ref|ZP_02666462.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168462567|ref|ZP_02696498.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168820725|ref|ZP_02832725.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194448833|ref|YP_002045954.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|198243936|ref|YP_002215184.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204931081|ref|ZP_03221907.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205352393|ref|YP_002226194.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856578|ref|YP_002243229.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|238690368|sp|B5FSN0|SYD_SALDC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238690442|sp|B5R1V2|SYD_SALEP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238690485|sp|B5R8D6|SYD_SALG2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238693638|sp|B4T7Z9|SYD_SALHS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|194407137|gb|ACF67356.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|195633952|gb|EDX52304.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197938452|gb|ACH75785.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204320125|gb|EDZ05330.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205272174|emb|CAR37032.1| Aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205339452|gb|EDZ26216.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205342579|gb|EDZ29343.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|206708381|emb|CAR32685.1| Aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|320085481|emb|CBY95262.1| Aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|326627445|gb|EGE33788.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 590

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L     +AI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLDGINSPVAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  Y
Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKK 586


>gi|113970236|ref|YP_734029.1| aspartyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123130420|sp|Q0HIZ5|SYD_SHESM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|113884920|gb|ABI38972.1| aspartyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 591

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 224/595 (37%), Positives = 340/595 (57%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + GLV +R    +NA + TG+IE+  +++ I++ +E LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGLVRARPNSQVNAQMKTGEIEVLGKELTIINSSEPLPLSLDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +++R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MTSEQVMAKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VFS   +   G  V A+   GG   +R   D   ++    G  GLA++   
Sbjct: 299 DLLKEVEFAVFSGPANDEEG-RVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PV K LN      I  R   Q GD   F A +           R    +
Sbjct: 358 DLTQGLEGIQSPVLKFLNEDIVNEIISRTGAQTGDIILFGADNATVVAESMGALRLKAGE 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQ 481
           +  ++    +   W++DFP +E  +        H+PFT P+G   + L+ N    +    
Sbjct: 418 DFNLLEGQ-WRPLWVVDFPMFE--KINGSFHAVHHPFTAPRGVTPQELEANPANRVSD-A 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G +R H  E+    F  +GI+ E  + +FG L  A + G PPH G+A 
Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +V+  K
Sbjct: 534 GLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGISVVKAAK 588


>gi|299067976|emb|CBJ39190.1| aspartate tRNA synthetase [Ralstonia solanacearum CMR15]
          Length = 607

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/595 (38%), Positives = 338/595 (56%), Gaps = 14/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V LSGW HR R HGG+IF+D+RD  G+ QVV +PD    F++A+
Sbjct: 4   RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L + G+V +R   T N N+ +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCLQVKGIVRARPEGTTNPNLASGKIEVLCHELTVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+  +    +   F  + + +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LTEQEIRDLFEEMIRTVFQN-TMSVALDAKFPVMEFREAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  V A+   GG   +R   D   ++    G  GLA+I   
Sbjct: 301 DAMKDVDFKVFSSPANAEGG-RVVALRVPGGAALSRGDIDAYTKFVEIYGAKGLAWIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416
               G      P+ K+L+      I  R   QDGD  FF A D  K  + A  A      
Sbjct: 360 EVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGA-DRAKVVNDAMGALRLKVG 418

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +  A+  G+   + ++  W++DFP +E++EE+ +    H+PFT P+         D   
Sbjct: 419 HSEFAKSTGLFE-DAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGK 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G +R +  EV  + F  + I+ E    +FG L  A Q G PPH
Sbjct: 478 CIAKAYDMVLNGWEIGGGSVRIYREEVQSKVFRALKINDEEARAKFGFLLDALQYGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GGIA G+DR+V ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+
Sbjct: 538 GGIAFGLDRVVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL 592


>gi|304383159|ref|ZP_07365633.1| aspartate--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335736|gb|EFM01992.1| aspartate--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 589

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/600 (38%), Positives = 347/600 (57%), Gaps = 19/600 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT++CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   D+A  + 
Sbjct: 2   YRTNTCGELRLSDAGKHVTLAGWVQRTRKMGGMTFVDLRDRYGITQLVFNEAVDAALCDE 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ +  +G V  R  E+ NAN+ TG IE+ A  + +LS +   P  +    +  
Sbjct: 62  ANKLGREYCIQAEGTVSER--ESKNANLPTGDIEILASALHVLSSSITPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  + +N+  R R+   +R  + A+ FIE  TPIL  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRQVVRQNLELRHRMTILVRNYLDAQQFIEVETPILIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+NQG FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNQGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF  Q+++L   E + R +F+E   G  + +   ++ + +A+RR+G+DKPDLR  +    
Sbjct: 239 SFAHQENVLAMFEGMARHLFKEV-RGVDLPDPLPQMTWHEAMRRFGSDKPDLRFGMEFVE 297

Query: 302 VTEHFVHS-EFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           + +    +  F VF      N    + AI   K    +R   + + ++ + + Q G A +
Sbjct: 298 LMDVLKGTGTFSVF------NDANYIGAICVPKCAHYSRKQLNELTDFVK-RPQVGAAGL 350

Query: 360 FW-RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADAR 417
            W +++E G +     + K         ++     + GD    ++G+ P K  +  +  R
Sbjct: 351 VWVKIEEDGTIK--SSIDKFYTPEVFAKLKETTGAKAGDLILIMSGERPNKTRTQLSTLR 408

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + + LG+ + N F   WI+DFP +EW++EE+++   H+PFTMP      L       +
Sbjct: 409 LEMGERLGLRDKNKFVCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPERV 468

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD VCNG E+  G IR H  ++  Q F  +G + E    +FG L  AF+ G PPH 
Sbjct: 469 RALAYDFVCNGIEVGGGSIRIHDGQLQEQMFRILGFTPERAMAQFGFLINAFKYGAPPHA 528

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           GIA G+DR V ++ G  ++R+   FP + +  D+++ +PS +  +QL+EL + I  N +K
Sbjct: 529 GIAFGLDRFVSIMAGLDSIRDCIAFPKNNSGRDVMLDAPSEIDAKQLQELSISIDLNQEK 588


>gi|269963127|ref|ZP_06177462.1| aspartyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269832091|gb|EEZ86215.1| aspartyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 592

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 232/596 (38%), Positives = 341/596 (57%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPESQVNKDMATGEVEILAKGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +  T E ++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVRATTEKMVREMWQELLNVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V  I   GG    R   D   E+    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN      I  R   + GD   F A             R  + +
Sbjct: 356 DRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +L +     +   W++DFP +E  ++E  +   H+PFT P G   E LK N  ++  +  
Sbjct: 416 DLELTKEGTWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVTAEELKANPAVA-NSNA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H +E+    F  +GI+ E  + +FG L  A + G PPH G+A 
Sbjct: 474 YDMVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFGFLLDALKFGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K
Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVTVAKEK 589


>gi|33866956|ref|NP_898515.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|46577185|sp|Q7U3K6|SYD_SYNPX RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33639557|emb|CAE08941.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetases, class I
           [Synechococcus sp. WH 8102]
          Length = 610

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/604 (37%), Positives = 343/604 (56%), Gaps = 30/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL   ++   V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSNGCGDLREQNIDQQVQLCGWVDRRRDHGGVIFIDLRDRSGTVQIKVDPDLGAEAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119
           + +RSE VL + G V +R  E++N  + TG +E+ A  I +L+ V   LP PV    E  
Sbjct: 62  EHLRSETVLQVAGKVRARPGESLNDKLATGAVEVLASGIIVLNNVKGNLPFPVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR  ++ N+  R + I + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAQTIQAARRFLEDEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YVLPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q++IL   E+++  +++    G  +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQEEILQLNESLICSIWKAV-KGIDLPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--------DRMNEWARSQ 351
            NV++      F+VFS  +      +  A+P    GGN A          D  +E A+  
Sbjct: 300 TNVSDIVKDMGFKVFSGAVKSGGAVKCIAVP----GGNDALSNVRIKPGGDVFSE-AQKA 354

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLA+I  R+     +  +G +  +L+    + +  R   + G    F AGD      
Sbjct: 355 GAGGLAFI--RVRNGCEIDSIGAIKDNLSDEQKQELLSRTGAEPGTLLLFGAGDTATVNK 412

Query: 412 FAADARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG--- 464
                R ++A+ELG++      + + F W++DFP +E+N EE + +  H+PF  P     
Sbjct: 413 ALDRVRQYLAKELGMVKADQDNDQWNFLWVVDFPMFEFNSEENRYEALHHPFCAPNAEDL 472

Query: 465 -GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
               S   + L   +A  YDLV NG E+  G +R H S +  Q    VG+  E  + +FG
Sbjct: 473 SSDASQWADTLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQEQFG 532

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            L  A   G PPHGG+A G+DR+VMLL G +++R+   FP +Q    L+  +P  V+ +Q
Sbjct: 533 FLMDALDVGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFPKTQQARCLMTNAPGGVADKQ 592

Query: 584 LREL 587
           L EL
Sbjct: 593 LEEL 596


>gi|218513947|ref|ZP_03510787.1| aspartyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 281

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 181/283 (63%), Positives = 227/283 (80%), Gaps = 2/283 (0%)

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
           R+YG+DKPDLRNPI+M  VTEHF  S F+VF+ +++ NP  ++WAIPAK GG +RAFCDR
Sbjct: 1   RKYGSDKPDLRNPIVMETVTEHFAGSGFKVFAGMIASNPKVQIWAIPAKTGG-SRAFCDR 59

Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403
           MN WA+SQGQPGL YIFWR  E+  + G GP+AK++    TEAIR +L + DGD+CFF+A
Sbjct: 60  MNAWAQSQGQPGLGYIFWR-SENDKLEGAGPLAKNIGEERTEAIRTQLGLGDGDACFFVA 118

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463
           G+P KF  FA +AR    +EL +++ + FE CWI+DFPF+EWN+EEKK+DFAHNPF+MPQ
Sbjct: 119 GEPEKFYKFAGEARTKAGEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQ 178

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
           GG+++L   D L+IKAFQYD VCNGFEIASG IRN   E M+ AF  VG+S++ VE+RFG
Sbjct: 179 GGLDALTNQDPLTIKAFQYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFG 238

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           GLYRAFQ G PPHGG A GIDRIVMLL+GAKN+RE+SLFPM+Q
Sbjct: 239 GLYRAFQYGAPPHGGAAFGIDRIVMLLVGAKNLREISLFPMNQ 281


>gi|24373980|ref|NP_718023.1| aspartyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|38372526|sp|Q8EEE9|SYD_SHEON RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|24348431|gb|AAN55467.1|AE015684_4 aspartyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 591

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 224/595 (37%), Positives = 339/595 (56%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G+V +R    +NA + TG+IE+  + + I++ +E LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGVVRARPDSQVNAQMKTGEIEVLGKALTIINSSEPLPLSLDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +++R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++N  E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MTSEQVMNKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VFS   +   G  V A+   GG   +R   D   ++    G  GLA++   
Sbjct: 299 DLLKDVEFAVFSGPANDEEG-RVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PV K LN      I  R   Q GD   F A             R    +
Sbjct: 358 DLTQGLEGIQSPVLKFLNENIVNEIINRTGAQTGDIILFGADQATVVAESMGALRLKAGE 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQ 481
           +  ++    +   W++DFP +E  +        H+PFT P+G   + L+ N    +    
Sbjct: 418 DFNLLEGQ-WRPLWVVDFPMFE--KINGSFHAVHHPFTAPRGVTPQELEANPANRVSD-A 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G +R H  E+    F  +GI+ E  + +FG L  A + G PPH G+A 
Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +V+  K
Sbjct: 534 GLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVKTAK 588


>gi|157962187|ref|YP_001502221.1| aspartyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189082143|sp|A8H549|SYD_SHEPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157847187|gb|ABV87686.1| aspartyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 597

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/606 (37%), Positives = 343/606 (56%), Gaps = 30/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  GI QVV +PD    F++A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+ + I GLV +R    INA++ TG++E+   ++ IL+ +  LP+ +   +   E 
Sbjct: 62  TLRSEFCVQIKGLVRARPDSQINADMRTGEVEILGLELTILNSSAPLPINMDKNQHNTEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   IV R+++ +++R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMADRIVFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +++  E ++RG+F+E  N +     F ++ +++A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MTSAQVMDKTEEMVRGLFKELLNVDL--GEFPKMTFEEAMRRFGSDKPDLRNPLELIDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   +   G   V +IP  G   +R   D   ++    G  GLA++   
Sbjct: 299 DIVKEVEFAVFNGPANDPEGRVAVLSIPG-GAKLSRKQLDEYAKYVTIYGAKGLAWMKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PV K L+     A+  R   Q GD              F AD  N +A+
Sbjct: 358 DLAQGMEGIQSPVLKFLSEDVVNALLERTGAQTGD-----------LILFGADKANIVAE 406

Query: 423 ELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKG 471
            +G +     E            W++DFP +E    +  +   H+PFT P     E L+ 
Sbjct: 407 AMGALRLKAGEDFDLLQGEWKPLWVVDFPMFE-RTSDGGLHAMHHPFTAPSNMTPEELEA 465

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           N + +I    YD+V NG E+  G +R H S++    F  +GI+ E    +FG L  A + 
Sbjct: 466 NPIGAISD-AYDMVLNGCELGGGSVRIHDSKMQSAVFRILGINDEEASEKFGFLLEALRY 524

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPH G+A G+DRI+ML+ GA ++R+V  FP +      L  +P   +  QL ELG+ +
Sbjct: 525 GTPPHAGLAFGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLAELGVSV 584

Query: 592 VENPKK 597
           VE   K
Sbjct: 585 VEAEPK 590


>gi|299140837|ref|ZP_07033975.1| aspartate--tRNA ligase [Prevotella oris C735]
 gi|298577803|gb|EFI49671.1| aspartate--tRNA ligase [Prevotella oris C735]
          Length = 585

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/606 (36%), Positives = 347/606 (57%), Gaps = 44/606 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT++CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   D    + 
Sbjct: 2   YRTNTCGELRLSDAGKEVVLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEADDRMLCDN 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + + G+V  R ++  N+ I TG IE+ A+++++LS +   P  +  E +  
Sbjct: 62  ANKLGREYCIQVKGIVSERQSK--NSKIATGDIEILAKELKVLSPSLTPPFTIEDESDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR+ + KN+  R R+   +R  + + +F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRNVVRKNLELRHRMTILIRNFLDSHDFMEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++N  E + R +F+E            ++ + +A++R+G+DKPDLR  +    
Sbjct: 239 SFVDQDDVINMFEEMARHLFKEIRGVELPK--LQQMTWHEAMKRFGSDKPDLRFGMEFVE 296

Query: 302 VTEHFV-HSEFRVFSKILSVN----PGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQP 354
           + E F     F VF +   +     PG   ++         R   + + ++ +    G  
Sbjct: 297 LKEAFAGKGNFSVFDEATYIGGICVPGCADYS---------RKQLNELTDFVKKPQVGAK 347

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTE----AIRVRLDMQDGDSCFFIAGDP---- 406
           GL +I +  D        G +   ++   TE     I+  +   DGD    ++GD     
Sbjct: 348 GLVFIKYNTD--------GTIKSSIDKFYTEDELKEIKKLMGANDGDLVLILSGDNSNKT 399

Query: 407 -LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
            ++ C+     R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP   
Sbjct: 400 RVQLCAL----RLEMGNRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPD 455

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
              L       ++A  YD VCNG E+  G +R H +++  + F  +G +KE  E +FG L
Sbjct: 456 DIPLLDEHPEQVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTKERAEAQFGFL 515

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             AF+ G PPH G+A G+DR V +  G  ++R+   FP + +  D+++ +P  +  +QL 
Sbjct: 516 MNAFKYGAPPHAGLAFGLDRFVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPGELDQKQLD 575

Query: 586 ELGLRI 591
           EL +++
Sbjct: 576 ELQIKL 581


>gi|91786768|ref|YP_547720.1| aspartyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|91695993|gb|ABE42822.1| aspartyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 601

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 225/600 (37%), Positives = 346/600 (57%), Gaps = 14/600 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEI 61
           + R++ CG +  S +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD A  F+ 
Sbjct: 6   QMRSNYCGLVTESLMGQTVSLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRADMFKT 65

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+ + + G+V +R   T+N ++ +G+IE+   ++ +L+ +   P  +  +    
Sbjct: 66  AEGVRNEFCVQVKGVVRARPEGTVNDHLKSGKIEVLCHELTVLNPSVTPPFQL-DDDNLS 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R  +R LDLRR  + KN++ R R+    R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 125 ETTRLTHRVLDLRRPYMQKNLMLRYRVAMETRKFLDTHGFIDIETPMLTKSTPEGARDYL 184

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E 
Sbjct: 185 VPSRVNEGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIET 243

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + DI +  + ++  +F+     +T    F  + Y+DA+ RYG+DKPDLR  +    
Sbjct: 244 SFMAEQDIRDMFQGMISNIFKTVL--DTDLGEFPVMAYNDAMHRYGSDKPDLRVNLEFTE 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F+VFS   +   G  V      G   +R   D   E+ +  G  GLA+I  
Sbjct: 302 LTDVMADVDFKVFSTPATTKGGRVVALRVPGGSEMSRGEIDGYTEFVKIYGAKGLAWIKV 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA----- 416
                G      P+ K+L+      I  R   ++GD  FF A D  K  + +  A     
Sbjct: 362 NDAGKGREGLQSPIVKNLHDAAIAEILKRTGARNGDLIFFGA-DKEKVVNDSIGALRLKV 420

Query: 417 -RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
             +   ++ G+     ++  W++DFP +E++EE ++    H+PFT P+ G E     D  
Sbjct: 421 GHSEFGKKTGLFTAG-WKPLWVVDFPMFEFDEEGQRWSAVHHPFTAPKDGHEDWMDTDPG 479

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              +  YD+V NG+E+  G +R H ++V  + F+ + I  E  + +FG L  A Q G PP
Sbjct: 480 RCISKAYDMVLNGWELGGGSVRIHRADVQNKVFNALKIGPEEAQQKFGFLLDALQYGAPP 539

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGG+A G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+  NP
Sbjct: 540 HGGLAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTHAPSPVDEKQLRELHIRL-RNP 598


>gi|83746621|ref|ZP_00943671.1| Aspartyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|83726755|gb|EAP73883.1| Aspartyl-tRNA synthetase [Ralstonia solanacearum UW551]
          Length = 622

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/599 (38%), Positives = 340/599 (56%), Gaps = 22/599 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V LSGW HR R HGG+IF+D+RD  G+ QVV +PD    F++A+
Sbjct: 19  RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 78

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L + G+V +R   T N N+ +G++E+   ++ +L+ +   P  +  +    E+
Sbjct: 79  GVRNEFCLQVKGIVRARPEGTTNPNLASGKVEVLCHELTVLNASVTPPFQL-DDDNLSET 137

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 138 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVP 197

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 198 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 256

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS----NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           + + +I +  E ++R VF+     NT+S      F  + + +A+ R+G+DKPDLR  +  
Sbjct: 257 LGEQEIRDLFEEMIRTVFK-----NTMSVELDATFPVMEFREAMARFGSDKPDLRVKLEF 311

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358
            +VT+     +F+VFS   +   G  V A+   GGG  +R   D   ++    G  GLA+
Sbjct: 312 TDVTDVMKDVDFKVFSNPANAEGG-RVVALRVPGGGALSRGDIDAYTKFVEIYGAKGLAW 370

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-- 416
           I       G      P+ K+L+      I  R   QDGD  FF A D  K  + A  A  
Sbjct: 371 IKVNEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGA-DRAKVVNDAMGALR 429

Query: 417 ----RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                +   +  G+   + ++  W++DFP +E++EE+ +    H+PFT P+         
Sbjct: 430 LKIGHSEFGKSTGLFE-DAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHREYLET 488

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D     A  YD+V NG+EI  G +R    EV  + F  + I +E    +FG L  A Q G
Sbjct: 489 DPGKCIAKAYDMVLNGWEIGGGSVRIFQEEVQSKVFRALKIGEEEARAKFGFLLDALQYG 548

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            PPHGGIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+
Sbjct: 549 APPHGGIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL 607


>gi|229824083|ref|ZP_04450152.1| hypothetical protein GCWU000282_01387 [Catonella morbi ATCC 51271]
 gi|229786437|gb|EEP22551.1| hypothetical protein GCWU000282_01387 [Catonella morbi ATCC 51271]
          Length = 588

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/589 (38%), Positives = 342/589 (58%), Gaps = 17/589 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS--VR 66
           CG +G   VG  + L GW+ + R  GG+IF+D+RD  G  QVV N D     +A++  +R
Sbjct: 8   CGQVGQEQVGQTITLKGWIQKRRDLGGLIFIDLRDREGFCQVVLNGDHLGDAMAEAERIR 67

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           SE+VL + G +  R  +  NA I TG  EL A+K+ IL+ ++  P+ +  E E  + +R 
Sbjct: 68  SEYVLEVTGTLQYRDEKQRNAKIPTGDFELMAEKLTILATSKTPPIYLDDEAEIQDDLRM 127

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           ++RFLDLRR  +  N+  R ++ +++R  +    FI+  TP LT S+PEGARD+LV +R 
Sbjct: 128 RHRFLDLRRPRMQANLRLRHQVTSAIRRYLDDLGFIDVETPYLTKSTPEGARDYLVATR- 186

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
             G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E SF+ Q
Sbjct: 187 EAGKFFALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDLETSFLNQ 245

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
            DI   +E +L+ V +  + G  ++  F  + Y  A+  YG DKPD+R  + + ++++  
Sbjct: 246 ADIQEIVEQMLKEVVKA-TRGLDMTEAFPSMTYAHAMAHYGVDKPDIRFDMTLKDLSDFA 304

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            + +F VF+   +V  G +V AI  KG      R   D + E  +  G  GLA++  ++ 
Sbjct: 305 ANCQFSVFAN--TVKEGGQVKAINLKGQADAYTRKTADALVEVVKPYGAKGLAWL--KVT 360

Query: 365 ESGNVAGMGPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           E G     GP+AK      +T+AI      + GD  FF+A  P    +   + R ++A+ 
Sbjct: 361 EEGL---NGPIAKFFAEPADTQAILDLTQGEPGDILFFVADKPQVVAAALGELRVNLAKA 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQY 482
             + + +   F WI D+P +E++EE  +   AH+PFT PQ   +E+LK N   ++ A  Y
Sbjct: 418 HQLFDEDALAFVWITDWPLFEYDEEAGRYFAAHHPFTSPQNLDLEALKANPDQAL-AQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+EI  G IR H   +  Q F  +G + E  +++FG L  A   G PPHGG+A G
Sbjct: 477 DIVLNGYEIGGGSIRIHTRPMQEQMFDLLGFTPEEAQSQFGFLLDALDYGFPPHGGLALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR+VMLL    N+REV  FP +    D  + +PS V+  QL+EL L++
Sbjct: 537 LDRLVMLLAKEPNIREVIAFPKNGRGVDTFIQAPSHVASAQLQELHLQV 585


>gi|16760851|ref|NP_456468.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29141457|ref|NP_804799.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213162636|ref|ZP_03348346.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213417350|ref|ZP_03350492.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
 gi|213426398|ref|ZP_03359148.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|289824028|ref|ZP_06543626.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|22257056|sp|Q8Z5W1|SYD_SALTI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|25293065|pir||AI0743 aspartate-tRNA ligase (EC 6.1.1.12) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16503148|emb|CAD05652.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137084|gb|AAO68648.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 590

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 228/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L     EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  Y
Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHVGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKK 586


>gi|114047575|ref|YP_738125.1| aspartyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|123326530|sp|Q0HUY7|SYD_SHESR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|113889017|gb|ABI43068.1| aspartyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 591

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/595 (37%), Positives = 342/595 (57%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G+V +R    +NA + TG+IE+  +++ I++ +E LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGVVRARPDSQVNAQMKTGEIEVLGKELTIINSSEPLPLSLDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +++R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MTSEQVMAKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + EF VFS   +   G  V A+   GG   +R   D   ++    G  GLA++   
Sbjct: 299 DLLKNVEFAVFSGPANDEEG-RVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PV K LN      I  R   Q GD   F A + +         R    +
Sbjct: 358 DLTQGLEGIQSPVLKFLNEGIVNEIISRTGAQTGDIILFGADNAIVVAESMGALRLKAGE 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQ 481
           +  ++    +   W++DFP +E  +        H+PFT P+G   + L+ N    +    
Sbjct: 418 DFNLLEGQ-WRPLWVVDFPMFE--KINGSFHAVHHPFTAPRGVTPQELEANPANRVSD-A 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G +R H  E+    F  +GI+ E  + +FG L  A + G PPH G+A 
Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +V+  K
Sbjct: 534 GLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGISVVKAAK 588


>gi|170769354|ref|ZP_02903807.1| aspartyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170121678|gb|EDS90609.1| aspartyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 590

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 228/592 (38%), Positives = 337/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVMGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    +AI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIDAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+I+ + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLIDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELGIQVVKK 586


>gi|62180479|ref|YP_216896.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|81309667|sp|Q57N96|SYD_SALCH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62128112|gb|AAX65815.1| aspartate tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
          Length = 590

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 337/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E+SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVEISF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTALQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L     +AI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLDGINSPVAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  Y
Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKK 586


>gi|254251438|ref|ZP_04944756.1| Aspartyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124894047|gb|EAY67927.1| Aspartyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 600

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 229/601 (38%), Positives = 339/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQVKGLVRNRPEGTVNAGLKSGKIEVLCHELTVLNPSVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMIANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F++  +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKKTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KG   +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGAELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   +DGD  FF A D  K  + +  A       
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++E+ +   AH+PFT P+         D    
Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  +V  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREDVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+   E P
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQP 598

Query: 596 K 596
           K
Sbjct: 599 K 599


>gi|153004196|ref|YP_001378521.1| aspartyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152027769|gb|ABS25537.1| aspartyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 616

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/602 (37%), Positives = 339/602 (56%), Gaps = 16/602 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG+L  +DVG  V L GWV+  R HGG +F+D+RD  G+TQVV   D      ++A
Sbjct: 22  RTHTCGELTKADVGKDVVLFGWVNNRRDHGGAVFIDLRDRTGVTQVVFEADVRPEVHDLA 81

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R E+ + + G V+SR A   N  + TG IE+ A ++E+ + +E  P  +  + +  E
Sbjct: 82  GQLRLEYCVGLRGKVVSRGANA-NPKLRTGDIEVHATELELFNRSEPTPFQIEDKLDTSE 140

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R +YR+LDLRR  L K ++ R R+ +  R       F+E  TP +   +P GAR+FLV
Sbjct: 141 EKRLQYRYLDLRRAPLQKTLMTRARVNHLTRNYFTDLAFLELETPFMVKYTPGGARNFLV 200

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYAL ++PQ +KQL M +GFDRYFQI  CFRDED R DR P EF Q+D+EMS
Sbjct: 201 PSRLNPGKFYALAESPQLFKQLYMMAGFDRYFQIVRCFRDEDLRLDRQP-EFTQIDVEMS 259

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR---NPIIM 299
           FVEQ+D+ + +E ++  +++E   G  +   F R+ +D+++ +YG DKPDLR     +++
Sbjct: 260 FVEQNDVFDVIEGLVVRLWKEVL-GVELPRPFPRMPFDESMAKYGNDKPDLRFDMPHVVL 318

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +          +  + +      +   +PA     +R   D++ E+ +  G  GLA  
Sbjct: 319 TELVRQHDGGGLPLLEEAVKAKGIVKAMRVPASANL-SRTEIDKLEEYVKGMGAKGLARA 377

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ + G      P AK +     EA+      Q GD   F  G      +  A+ R H
Sbjct: 378 --KIGDGGEWT-QSPFAKTVTPALREAVNAACGAQPGDLLLFQFGKESVVHTVMANLRVH 434

Query: 420 IAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           +A+ +G+I    +   + F W+++ P +E++EE  +   AH+ FT P          D  
Sbjct: 435 LAKRMGLIPEYGSGGQWRFLWVVNPPLFEFDEESGQWAAAHHAFTRPHDTDVQYLETDPG 494

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            +  ++YDLV NGFEI  G IR H   V  + F  +GIS E  +N+FG L  A + G PP
Sbjct: 495 KVNCYRYDLVLNGFEIGGGSIRLHDPAVQARVFKAMGISDEEAKNKFGFLLEALKMGAPP 554

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL GA+++R+V  +P +Q   DL+ G+P  V  +QLRE+ ++   +P
Sbjct: 555 HGGIALGMDRLVMLLTGAESLRDVVAWPKTQKGTDLMTGAPGDVDAKQLREVYVKSTYDP 614

Query: 596 KK 597
            K
Sbjct: 615 GK 616


>gi|125624982|ref|YP_001033465.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166225352|sp|A2RN94|SYD_LACLM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|124493790|emb|CAL98782.1| AspS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071781|gb|ADJ61181.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 590

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 233/601 (38%), Positives = 348/601 (57%), Gaps = 30/601 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-- 62
           RT+  G++    +   + + GWV + R  GG+IF+D+RD  GI Q+V NP++A  E+A  
Sbjct: 3   RTNYAGNITEEYLNQTITVKGWVAKRRNLGGLIFIDLRDREGIVQIVVNPETAATEVAEA 62

Query: 63  -KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
               R+E+VL + G V+ R+++  N  I TG IE+ A  IEILS ++  P  +  + E  
Sbjct: 63  ADKARNEFVLEVTGKVVERASK--NDKIKTGGIEIEATAIEILSTSKTTPFEIKDDVEVL 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R KYR+LDLRR  + KNI  R     S+R  +    FI+  TP L  S+PEGARD+L
Sbjct: 121 DDTRLKYRYLDLRRPEMLKNITMRHATTRSIREYLDGAGFIDVETPFLNKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +G DRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGEFYALPQSPQLMKQLLMTAGLDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ +++I    E ++  V ++   G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLGEEEIQELTEELIAKVMKDV-KGIDVTLPFPRMNYDDAMNFYGSDKPDTRFELLLTD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           ++      +F+VF +   V       AI  KG     +R   D++ E A+  G  GLA++
Sbjct: 299 LSALAKTVDFKVFQEAEVVK------AIVVKGAADKYSRKSIDKLTEQAKQNGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            +   E G  A  G V+K L   +T++    L + D D   F+A D L   + A  A R 
Sbjct: 353 KF---EKGEFA--GGVSKFL-AESTDSFVNELKLTDNDLVLFVA-DSLDVANSALGALRL 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-------KG 471
            I ++ G+I+   F F W++D+P +EW++EE++   AH+PFT+P    ++        K 
Sbjct: 406 TIGKQQGLIDFRKFNFLWVIDWPMFEWSDEEERYMSAHHPFTLPTKETQAFLSADGHRKD 465

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +DL  ++A  YD+V NG+E+  G +R +  ++  +  S +G   E    +FG L  A   
Sbjct: 466 SDLKKVRAHAYDIVLNGYELGGGSLRINSRDLQEEMLSALGFKLEDANEQFGFLLEALDY 525

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL +++
Sbjct: 526 GFPPHGGLALGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSIVADKQLEELSIKL 585

Query: 592 V 592
            
Sbjct: 586 A 586


>gi|89900091|ref|YP_522562.1| aspartyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|123279048|sp|Q21YX2|SYD_RHOFD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|89344828|gb|ABD69031.1| aspartyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 611

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/606 (38%), Positives = 349/606 (57%), Gaps = 26/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  + +G  V L GWV+R R HGG+IF+DIRD  G  QVV +PD A  F++A+
Sbjct: 4   RSHYCGLVTDTLLGQTVTLCGWVNRRRDHGGVIFVDIRDREGYVQVVCDPDRADMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + GLV +R   T+N  + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GLRNEFCIQVKGLVRARPEGTVNEGLKSGKIEVLCHELTVLNPSVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N++ R R+   +R  + A  F++  TP+L  S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPYMQNNLMLRYRVAMEVRKFLDANGFVDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRVHEGHFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + DI +  + ++  VF+  +  N     F  + Y +A+ RYG+DKPDLR  +    +T
Sbjct: 242 LSEQDIRDLFQEMITTVFK--TTLNVDLGEFPVMAYSEAMHRYGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEV-WAIPAKG---GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +     +F+VFS   ++  G  V   IP      GG +R   D   E+ +  G  GLAYI
Sbjct: 300 DVMTDVDFKVFSGAATMKGGRVVGLRIPGGAREVGGLSRGEIDAYAEFVKIYGAKGLAYI 359

Query: 360 FWRLDESGNVAG---------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
             +++E     G           P+ K+++      +  R   QDGD  FF A D  K  
Sbjct: 360 --KVNELAKGPGDKALRWPGLQSPIVKNIHDKAIAEVLARTGAQDGDLIFFGA-DKAKIV 416

Query: 411 SFAADA-RNHIAQ-ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
           + A  A R  I   E G  N      +   W++DFP +E++EE ++    H+PFT P+ G
Sbjct: 417 NDAIGALRIKIGHSEFGKKNALFEKSWRPMWVVDFPMFEFDEEAQRYTAVHHPFTAPKEG 476

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
            E           +  YD+V NG+E+  G +R H ++V  + F  + IS E  +++FG L
Sbjct: 477 HEDWMVTAPEKCISQGYDMVLNGWEMGGGSVRIHRADVQQKVFDALKISPEEAQDKFGFL 536

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             A Q G PPHGG+A G+DRI+ L+ GA+++R+V  FP +Q    LL  +PS V  +QLR
Sbjct: 537 LDALQYGAPPHGGLAFGLDRIITLMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLR 596

Query: 586 ELGLRI 591
           EL +R+
Sbjct: 597 ELHIRL 602


>gi|322434280|ref|YP_004216492.1| aspartyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321162007|gb|ADW67712.1| aspartyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 607

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 238/608 (39%), Positives = 341/608 (56%), Gaps = 34/608 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CGDL  ++ G  V L GWV+R R HG +IFLD+RD  GITQ+V + +  +A    A
Sbjct: 11  RTHMCGDLRAANDGQPVVLMGWVNRRRDHGNLIFLDVRDRTGITQIVLDKERGAAAHLKA 70

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +S R E+V+   G V  R A+  N  + TG IE+ A ++ +L+ A+  P     +    E
Sbjct: 71  ESARPEFVVAAVGQVRLRDADLRNPKMPTGDIEVVATELLLLNDAKTPPFSPAEDAIANE 130

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +  N   R  +  ++R  +  + F+E  TP +T S+PEGARD+LV
Sbjct: 131 EVRLKYRYLDLRRPEMQHNFRLRHEVARAIRNYLSDDGFLEIETPFMTRSTPEGARDYLV 190

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQ+LM SGFD+YFQIA CFRDED R+DR P EF Q+D+E +
Sbjct: 191 PSRVHAGEFYALPQSPQIFKQILMVSGFDKYFQIARCFRDEDLRADRQP-EFTQIDLETT 249

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+ I   +E  L   F+  +   T+   F+++ YD+AIR YG DKPD+R P  M ++
Sbjct: 250 FPSQERIFRIVEGFLTAAFK--AANITLQPPFVQMTYDEAIRHYGIDKPDMRLP-AMTDL 306

Query: 303 TEHFVHSEFRVFSKILSVNP--GYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI- 359
           T+  V  + R   KI    P  G+ + +     G   R+  + +  +    G+ GL ++ 
Sbjct: 307 TDT-VTPDLRTQLKIEQALPILGFVIPSAGTLSGTQKRSLIEEIRTFF---GETGLDFLD 362

Query: 360 FWRLDESGNVAG--------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
             RL  +   A         M P    L +V T  +             +     L+   
Sbjct: 363 VARLKTNETFAPLAAAIADEMKPAEADLVVVITPKLGTPERWNYDPQWIYKKVGALRLEL 422

Query: 412 FAADARNH-IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ------G 464
               A  H + ++ G      ++FCW+ DFP YEW+EE K    AH+PFT P       G
Sbjct: 423 AKKFADKHGLFKQTG--TAADYKFCWVTDFPMYEWDEEAKVWQAAHHPFTSPHEDDITSG 480

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
            + S KG    +++A  YD+V NG E+ SG IR H  +V  + F ++G+S E  + RFG 
Sbjct: 481 RLVSDKG----AVRALAYDIVLNGTELGSGSIRIHRKDVQAEIFRSLGMSDEEQKARFGF 536

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
              A + G PPHGGIA G+DRIVM+L GA ++REV  FP +    DL++ +P+ VS +QL
Sbjct: 537 FLDALEYGTPPHGGIALGLDRIVMILAGATSLREVIAFPKTARAIDLMVDAPTPVSDQQL 596

Query: 585 RELGLRIV 592
           R+L LR V
Sbjct: 597 RDLSLRTV 604


>gi|317491783|ref|ZP_07950218.1| aspartyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920217|gb|EFV41541.1| aspartyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 596

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/592 (38%), Positives = 341/592 (57%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT+ CG L +S  G  V L GWVHR R  GG+IF+D+RD  G+ QV  +PD    F+ A 
Sbjct: 2   RTNYCGQLNLSHEGQEVTLCGWVHRRRDLGGLIFIDLRDREGVVQVFFDPDHQEAFQQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R     N  + TG++E+    + I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCVQITGTVRARPDSQKNKEMSTGEVEVFGHALTIINRSE--PLPLDFNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R RI   +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 NRLKYRYLDLRRPEMAQRLKTRARITAFVRRFMDNHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME + R +++E    +     F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MSAEQVREVMEELARSLWQEIKGVDL--GKFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG    R   D   ++    G  GLA++   
Sbjct: 297 DLVKDVDFKVFSGPAN-DPKGRVIALRVPGGAHLTRKIIDEYGQFVSIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK LN    E+I  R   Q  D  FF A D  K  + A  A R  + 
Sbjct: 356 DRAAGMEGVQSPIAKFLNADVLESILERTGAQSEDILFFGA-DTSKIATDAMGALRLKVG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +EL + N + +   W++DFP +E ++ E  +   H+PFT P+      LK + + +I A 
Sbjct: 415 RELKLTNEDSWAPLWVIDFPMFE-DDGEGGLAAMHHPFTAPRDISPAELKAHPVGAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  E+    F  +GI+++   ++FG L  A + G PPH G+A
Sbjct: 473 AYDMVMNGYEVGGGSVRIHNGEMQETVFGILGITEQEQRDKFGFLLDALKYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL G  N+R+V  FP +    D L  +PS  +   L+EL + +V
Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAADPLTDAPSFANPASLQELSISVV 584


>gi|261252476|ref|ZP_05945049.1| aspartyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260935867|gb|EEX91856.1| aspartyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 592

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 233/596 (39%), Positives = 341/596 (57%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ A+ LPL  F ++   E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPDSQVNKDMATGEVEIIAKGLEIINRADVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +  T E ++R +++E  + +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRATTEKMVREMWQELLDVDL--GQFPIMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V  I   GG    R   D   E+    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAKLTRKQIDSYGEFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN      I  R   + GD   F A             R  +  
Sbjct: 356 DRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANTVSEALGALRLKLGT 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E  ++E  +   H+PFT P G   E LK N   +  +  
Sbjct: 416 DLELTNESAWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVNAEELKAN-PAAANSNA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A 
Sbjct: 474 YDMVLNGYEVGGGSVRIHNAEMQSAVFDILGIEADEQQAKFGFLLDALKFGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VMLL G +N+R+V  FP + N   LL  +PS  +   L EL + +    KK
Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTNASCLLTDAPSLANPASLEELAIAVKAAEKK 589


>gi|197263101|ref|ZP_03163175.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197241356|gb|EDY23976.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
          Length = 590

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L     + I  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLDGINSPVAKFLTADIVDVILERTGAQDGDMIFFGADNKKVVADALGALRVKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  Y
Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  ++  L ELG+++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANLAALTELGIQVVKK 586


>gi|261340251|ref|ZP_05968109.1| aspartate--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288317336|gb|EFC56274.1| aspartate--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 590

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/596 (38%), Positives = 337/596 (56%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L  S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRAEALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + +NA + TG +E+ A  + I++ AE LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNVNAEMATGAVEVLASDLVIINRAEALPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++RG++ +         +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREVMEALVRGLWNDVKGVEL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   +   G  V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLVKSVEFAVFAGPANDAKG-RVAALRVPGGASLSRKQIDDYGNFIKIYGAKGLAYIKVT 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLDGITSPVAKFLNADIVEAILERTGAQDGDMIFFGADNKKVVADAMGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAFQ 481
           +L + +   +   W++DFP +E ++ E  +   H+PFT P+    + LK     ++ A  
Sbjct: 416 DLSLTDETKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPEEAV-ANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHSGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+ +V+  +K
Sbjct: 534 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLAELGIEVVKKDEK 589


>gi|281422425|ref|ZP_06253424.1| aspartate--tRNA ligase [Prevotella copri DSM 18205]
 gi|281403488|gb|EFB34168.1| aspartate--tRNA ligase [Prevotella copri DSM 18205]
          Length = 586

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 224/597 (37%), Positives = 342/597 (57%), Gaps = 26/597 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YR+++CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   +    + 
Sbjct: 2   YRSNTCGELRLSDAGKEVTLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEADNKDLCDA 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + I G+V  R ++  N  + TG IE+  +++ +LS ++  P  +    +  
Sbjct: 62  ANKLGREFCIQIKGVVSERQSK--NPKMDTGDIEILVKELNVLSQSQTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  + KN+  R R+   +R  + A+NF+E  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRPAVRKNLELRHRMCILIRNFLDAQNFMEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++N  E + R +F+E            ++ + DA+RR+G+DKPDLR  +    
Sbjct: 239 SFVDQDDVINLFEEMARHLFKEIRGVELPK--LEQMTWHDAMRRFGSDKPDLRFGMEFVE 296

Query: 302 VTEHFV-HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359
           + + F     F VF +   +        +P       +   +  +   R Q G  GL YI
Sbjct: 297 LKDAFTGKGNFSVFDEAKYIGG----ICVPGCADYCRKQLNELTDFVKRPQVGAKGLVYI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-----LKFCSFAA 414
            +  D  G V     + K  +      I+  +  +DGD    ++GD      ++ CS   
Sbjct: 353 KYNAD--GTVK--SSIDKFYSPEELAEIKTVMGAKDGDLVLILSGDNANKTRIQLCSL-- 406

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L     
Sbjct: 407 --RLEMGDRLGLRDKNVFKCLWIIDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHP 464

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YD VCNG E+  G +R H +++  + F  +G + E  E +FG L  AF+ G P
Sbjct: 465 EQVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAP 524

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PH G+A G+DR V ++ G  ++R+   FP + +  D+++ +PS +  +QL EL +++
Sbjct: 525 PHAGLAFGLDRFVSIMAGLDSIRDCIAFPKNNSGRDVMLDAPSELDPKQLDELEIKL 581


>gi|320527500|ref|ZP_08028680.1| aspartyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132057|gb|EFW24607.1| aspartyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 590

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/593 (36%), Positives = 342/593 (57%), Gaps = 11/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L +++VG  V L GWV + R  G ++F+D+RD  GI Q+    D +  +  K 
Sbjct: 8   RTHENGTLRLANVGEKVTLVGWVAKRRNLGSLVFIDLRDRSGIVQLTF--DESIADAVKD 65

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E++L + G V  R  +  N  I TG+IE+  + + I++ AE  P+ +  + +  E  
Sbjct: 66  VRNEYILQVTGTVEKR--KDANPKIATGEIEIHVESVNIVNSAETAPITIADDTDTSEDT 123

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  L +N++ R R+    R  +  + F+E  TPIL  S+PEGARD+LVPS
Sbjct: 124 RLKYRYLDLRRSILQQNLILRHRVCMVARNVLDKQGFVEVETPILARSTPEGARDYLVPS 183

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G F+ALPQ+PQ YKQLLM  G ++YFQIA CFRDED R+DR P EF Q+D+EMSF 
Sbjct: 184 RIYNGKFWALPQSPQIYKQLLMIGGMEKYFQIARCFRDEDLRADRQP-EFTQIDIEMSFG 242

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++D I   +E++++ +F+E  N  T+ ++F+RI + + +RR+G+DKPD+R    + ++T 
Sbjct: 243 DEDTIFAVVEDLMQNIFKETKN-YTLEDHFVRIPWAECMRRFGSDKPDMRFGNEIQDITS 301

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++EF+VF   +                  +R   D++ ++ +  G    A  + +++
Sbjct: 302 VFENTEFQVFKNTIENGGIVNCVKFENAADKYSRKGLDQLQDFVK-HGFKAKALAYLKME 360

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
              N    G +AK L+      +  +L + + D    IA +     +     R  +  EL
Sbjct: 361 ---NDVLTGSIAKVLSEEEKAKLVEQLGLANNDLVLVIADNARIVQASLGALRVRLGHEL 417

Query: 425 GIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            +I     ++F W+ DFP +E++EE+++   AH+PFT P+         D   + +  YD
Sbjct: 418 NLIPTETTYKFLWVTDFPMFEYSEEDERWVAAHHPFTAPKEEDVDKLFTDPGHVSSRAYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG+E+ SG IR H  E+  + F  +G+S E  + RFG    +F+ G PPHGG+  G+
Sbjct: 478 LVLNGYELLSGSIRIHSQELQAKVFEAIGLSLEDAKARFGFFLDSFRYGTPPHGGVGIGL 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +R++M+L G  N+R+V  FP + +  DL+  +P+ V  +QL  LG+ I +  K
Sbjct: 538 ERLIMVLAGTDNIRDVVAFPTTNSSFDLMSEAPNVVDKKQLDILGIEISKQEK 590


>gi|206581095|ref|YP_002237743.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|238064670|sp|B5XQ00|SYD_KLEP3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|206570153|gb|ACI11929.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 595

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 231/596 (38%), Positives = 336/596 (56%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L  S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + INA++ TG IE+ A  + I++ +E LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRAREEKNINADMATGAIEVLASDLTIINRSESLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKIRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNPI + +V 
Sbjct: 239 MTAPQVREIMEAMVRQLWLEIKGVDL--GDFPIMTFAEAERRYGSDKPDLRNPIELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKLIDEYGNFVKIYGAKGLAYIKVT 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L     EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGMDGINSPVAKFLTAEIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +L + + + +   W++DFP +E ++ E  +   H+PFT P+    + LK     ++ A  
Sbjct: 416 DLSLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTADELKAAPEEAV-ANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  ++    F  +GI++     +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHRGDMQQTVFGILGINEHEQREKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++VE   K
Sbjct: 534 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALGELGIQVVEKEAK 589


>gi|227524427|ref|ZP_03954476.1| aspartyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088386|gb|EEI23698.1| aspartyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 595

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 228/601 (37%), Positives = 351/601 (58%), Gaps = 18/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT   G +    +G  V L GWV + R  GG+IF+++RD  GI Q+V + +       +A
Sbjct: 3   RTTYAGLVDDKLIGKEVVLKGWVQKRRDLGGLIFIELRDREGIVQLVFSEEFGKDALAVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R E+V+   G V++R+ + IN  + TG+IE+     +IL+V++  P  +       E
Sbjct: 63  DKLRGEYVVEAKGTVVARAPKEINPKMKTGKIEVDITDAKILAVSKTPPFYIEDGINVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++ KYR+LDLRR  +  NI+ R RII S+      E FI+  TP LT S+PEGARD+LV
Sbjct: 123 DLKLKYRYLDLRRPEMQYNILLRNRIIQSIHSFFDGEGFIDIETPTLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQQ+KQ+LM +GFD+Y+QIA C+RDED R DR P EF Q+DMEMS
Sbjct: 183 PSRVYPGSFYALPQSPQQFKQMLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQIDMEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +Q++I++  E  +  V ++ + G  V   F R+ +D+++ R+GTD+PD+R  + + ++
Sbjct: 242 FADQEEIMDVTEGFIAKVMKD-AMGKDVKLPFKRMDWDESMARFGTDQPDVRFGMELKDL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++   + +F+VFS   +V  G +V AI   GG    +R   D+   +    G  GLA++ 
Sbjct: 301 SDIMKNVDFKVFSG--AVENGGQVKAIAVPGGADKYSRKDLDQFASYVERFGAKGLAWL- 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              D+S N    GP+AK     +  + I  + + + GD   F A +        A  R  
Sbjct: 358 KVTDDSFN----GPIAKFFKDADLRQKILDKAEAKPGDLLLFAADNSRIVADTLAYLRVE 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIK 478
           IA+E  +I+ + F F WI+++P + W+ + K+   AH+PFTMP +  +  L  ++    K
Sbjct: 414 IAKEQNMIDESKFAFLWIVNWPLFHWDVDLKRYVAAHHPFTMPNEEDVHYLLNDNEDPHK 473

Query: 479 AF--QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           A+   YD++ NG E+  G IR H  ++  + F  +G +KE  E++FG    A   G PPH
Sbjct: 474 AYAQSYDIILNGLELGGGSIRIHTRKLQERMFKALGFTKESAESQFGYFLTALDYGFPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR V LL   +N+R+V  FP +    + L  +PS V+ +QL +LG+  VEN  
Sbjct: 534 GGLAIGLDRFVRLLADRENIRDVIAFPKNSKAVEPLTSAPSPVANKQLDDLGI-FVENQD 592

Query: 597 K 597
           K
Sbjct: 593 K 593


>gi|116512888|ref|YP_811795.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123025168|sp|Q02WJ0|SYD_LACLS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116108542|gb|ABJ73682.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 590

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/601 (38%), Positives = 348/601 (57%), Gaps = 30/601 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-- 62
           RT+  G++    +   + + GWV + R  GG+IF+D+RD  GI Q+V NP++A  E+A  
Sbjct: 3   RTNYAGNITEEYLNQTITVKGWVAKRRNLGGLIFIDLRDREGIVQIVVNPETAATEVAEA 62

Query: 63  -KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
               R+E+VL + G V+ R+++  N  I TG IE+ A  IEILS ++  P  +  + E  
Sbjct: 63  ADKARNEFVLEVTGKVVERASK--NDKIKTGGIEIEATAIEILSTSKTTPFEIKDDVEVL 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R KYR+LDLRR  + KNI  R     S+R  +    FI+  TP L  S+PEGARD+L
Sbjct: 121 DDTRLKYRYLDLRRPEMLKNITMRHATTRSIREYLDGAGFIDVETPFLNKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM +G DRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNKGEFYALPQSPQLMKQLLMTAGLDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ +++I    E ++  V ++   G  V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLGEEEIQELTEELIAKVMKDV-KGIDVTLPFPRMNYDDAMNFYGSDKPDTRFELLLTD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           ++      +F+VF +   V       AI  KG     +R   D++ E A+  G  GLA++
Sbjct: 299 LSALAKTVDFKVFQEAEVVK------AIVVKGAADKYSRKSIDKLTEQAKQNGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
            +   E G  A  G ++K L   +T++    L + D D   F+A D L   + A  A R 
Sbjct: 353 KF---EKGEFA--GGISKFL-AESTDSFVNELKLTDNDLVLFVA-DSLDVANSALGALRL 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-------KG 471
            I ++ G+I+   F F W++D+P +EW++EE++   AH+PFT+P    ++        K 
Sbjct: 406 TIGKQQGLIDFRKFNFLWVIDWPMFEWSDEEERYMSAHHPFTLPTKETQAFLSADGHRKD 465

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +DL  ++A  YD+V NG+E+  G +R +  ++  +  S +G   E    +FG L  A   
Sbjct: 466 SDLKKVRAHAYDIVLNGYELGGGSLRINSRDLQEEMLSALGFKLEDANEQFGFLLEALDY 525

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL +++
Sbjct: 526 GFPPHGGLALGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSIVADKQLEELSIKL 585

Query: 592 V 592
            
Sbjct: 586 A 586


>gi|188577440|ref|YP_001914369.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|238689554|sp|B2STK7|SYD_XANOP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|188521892|gb|ACD59837.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 588

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/595 (38%), Positives = 341/595 (57%), Gaps = 21/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + TG++E+ A +I IL+ A   PLP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRTGKVEVIATRISILNKAA--PLPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RRYG+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMMRAIFKEVVDVD-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + +V E    SEF VF+   +   G  V A+   GG   +R   D     A   G  GLA
Sbjct: 296 LVDVAELVKSSEFPVFTAAANDADG-RVAALRIPGGATLSRKQIDDYAAHAAKYGAKGLA 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L E+G V    P+AK        A+   +   +GD  FF AG   K   F    R
Sbjct: 355 YI--KLSETGEVN--SPIAKFFGEEAFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476
               +E  ++    +   W+ DFP +EW++E ++    H+PFT P    +  L+ N   +
Sbjct: 411 LKAGKEFDLV-AEGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARTA 469

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPH
Sbjct: 470 V-SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GGIA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ ++I
Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQI 583


>gi|325929372|ref|ZP_08190502.1| aspartyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325540284|gb|EGD11896.1| aspartyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 588

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 228/602 (37%), Positives = 348/602 (57%), Gaps = 23/602 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + +G++E+ A +I IL+ A   PLP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIATRISILNKAA--PLPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RR+G+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRFGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + +V E    S+F VF+       G  V A+   GG   +R   D     A   G  GLA
Sbjct: 296 LVDVAELVKASQFPVFTAAADDADG-RVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLA 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +L E+G V+   P+AK  +  +  A+   +   +GD  FF AG   K   F    R
Sbjct: 355 YI--KLSETGEVS--SPIAKFFSEESFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLS 476
               ++  ++  + +   W+ DFP +EW+EE ++    H+PFT P    +  L+ N   +
Sbjct: 411 LKAGKDFNLV-ADGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTA 469

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPH
Sbjct: 470 V-SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPH 528

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   PK
Sbjct: 529 GGIAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV--RPK 586

Query: 597 KI 598
           ++
Sbjct: 587 QV 588


>gi|265763994|ref|ZP_06092562.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|263256602|gb|EEZ27948.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_16]
          Length = 585

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 225/590 (38%), Positives = 338/590 (57%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           +RTH+CG+L +SDV   V+LSGWV R R  GG+ F+D+RD YGITQ+V N   D+   E 
Sbjct: 2   FRTHTCGELRISDVNKQVKLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEIDAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ I G V  R ++  N++I TG IE+   ++ IL+ A   P  +    +  
Sbjct: 62  ANKLGREFVIQIVGTVNERFSK--NSHIPTGDIEIIVSELNILNSAITPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  +  N+  R ++   +R  +    F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRSAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D++ T E + + +F+   N   ++  F R+ + +A+R YG+DKPD+R  +    
Sbjct: 239 SFVEQEDVITTFEGMAKHLFKVIRNIE-LTEPFPRMPWSEAMRLYGSDKPDIRFGMQFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDILKGHSFSVFD-----NATY-IGGICAEGAASYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  G V     V K       + ++     + GD    ++G D +K      + R  
Sbjct: 352 ARIEADGTVK--SSVDKFYTQEVLQQLKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   +  +++A
Sbjct: 410 MGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTNPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSQLQNKMFELLGFTPERAQEQFGFLMNAFKFGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L  G  ++R+   FP + +  D+++ +P+ +   QL EL L
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLEELNL 579


>gi|224583594|ref|YP_002637392.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|254781749|sp|C0Q2E8|SYD_SALPC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|224468121|gb|ACN45951.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322714954|gb|EFZ06525.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 590

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTALQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L     +AI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLDGINSPVAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  Y
Sbjct: 416 DLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKK 586


>gi|207727909|ref|YP_002256303.1| aspartyl-trna synthetase (aspartate--trna ligase)(asprs) protein
           [Ralstonia solanacearum MolK2]
 gi|206591151|emb|CAQ56763.1| aspartyl-trna synthetase (aspartate--trna ligase)(asprs) protein
           [Ralstonia solanacearum MolK2]
          Length = 607

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 231/599 (38%), Positives = 340/599 (56%), Gaps = 22/599 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V LSGW HR R HGG+IF+D+RD  G+ QVV +PD    F++A+
Sbjct: 4   RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L + G+V +R   T N N+ +G++E+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCLQVKGIVRARPEGTTNPNLASGKVEVLCHELTVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS----NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           + + +I +  E ++R VF+     NT+S      F  + + +A+ R+G+DKPDLR  +  
Sbjct: 242 LGEQEIRDLFEEMIRTVFK-----NTMSVELDATFPVMEFREAMARFGSDKPDLRVKLEF 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358
            +VT+     +F+VFS   +   G  V A+   GGG  +R   D   ++    G  GLA+
Sbjct: 297 TDVTDVMKDVDFKVFSNPANAEGG-RVVALRVPGGGALSRGDIDAYTKFVEIYGAKGLAW 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-- 416
           I       G      P+ K+L+      I  R   QDGD  FF A D  K  + A  A  
Sbjct: 356 IKVNEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGA-DRAKVVNDAMGALR 414

Query: 417 ----RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                +   +  G+   + ++  W++DFP +E++EE+ +    H+PFT P+         
Sbjct: 415 LKIGHSEFGKSTGLFE-DAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLET 473

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D     A  YD+V NG+EI  G +R    EV  + F  + I +E    +FG L  A Q G
Sbjct: 474 DPGKCIAKAYDMVLNGWEIGGGSVRIFQEEVQSKVFRALKIGEEEARAKFGFLLDALQYG 533

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            PPHGGIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+
Sbjct: 534 APPHGGIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL 592


>gi|117920398|ref|YP_869590.1| aspartyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166225430|sp|A0KWL5|SYD_SHESA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|117612730|gb|ABK48184.1| aspartyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 591

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 223/595 (37%), Positives = 340/595 (57%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G+V +R    +NA + TG+IE+  +++ I++ +E LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGVVRARPDSQVNAQMKTGEIEVLGKELTIINSSEPLPLSLDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +++R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MTSEQVMAKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VFS   +   G  V A+   GG   +R   D   ++    G  GLA++   
Sbjct: 299 DLLKEVEFAVFSGPANDEEG-RVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PV K LN      I  R   Q GD   F A +           R    +
Sbjct: 358 DLTQGLEGIQSPVLKFLNEGIVNEIISRTGAQTGDIILFGADNATVVAESMGALRLKAGE 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQ 481
           +  ++    +   W++DFP +E  +        H+PFT P+G   + L+ N    +    
Sbjct: 418 DFNLLEGQ-WRPLWVVDFPMFE--KINGSFHAVHHPFTAPRGVTPQELEANPANRVSD-A 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G +R H  E+    F  +GI+ E  + +FG L  A + G PPH G+A 
Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +V+  K
Sbjct: 534 GLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGISVVKAAK 588


>gi|53713670|ref|YP_099662.1| aspartyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|62287541|sp|Q64TQ1|SYD_BACFR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|52216535|dbj|BAD49128.1| aspartyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 585

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           +RTH+CG+L +SDV   V+LSGWV R R  GG+ F+D+RD YGITQ+V N   D+   E 
Sbjct: 2   FRTHTCGELRISDVNKQVKLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEIDAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ I G V  R ++  N++I TG IE+   ++ IL+ A   P  +    +  
Sbjct: 62  ANKLGREFVIQIVGTVNERFSK--NSHIPTGDIEIIVSELNILNSAITPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  +  N+  R ++   +R  +    F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRSAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D++ T E + + +F+   N   ++  F R+ + +A+R YG+DKPD+R  +    
Sbjct: 239 SFVEQEDVITTFEGMAKHLFKVIRN-IELTGPFPRMPWSEAMRLYGSDKPDIRFGMQFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G  G  R   D + E+ +         ++
Sbjct: 298 LMDILKGHGFSVFD-----NATY-IGGICAEGAAGYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  G V     V K       + ++     + GD    ++G D +K      + R  
Sbjct: 352 ARIEADGTVK--SSVDKFYIQEVLQQLKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   +  +++A
Sbjct: 410 MGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTNPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 NAYDMVINGVEVGGGSIRIHDSQLQNKMFELLGFTPERAQEQFGFLMNAFKFGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L  G  ++R+   FP + +  D+++ +P+ +   QL EL L
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLEELNL 579


>gi|325918028|ref|ZP_08180191.1| aspartyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325535761|gb|EGD07594.1| aspartyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 583

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/597 (38%), Positives = 348/597 (58%), Gaps = 18/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P++A  F +A 
Sbjct: 2   RTHFCGLVDETMIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPENAEVFPVAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+  E VL ++G+V +R A  +N  + +G++E+ A +I IL+ A   PLP        E 
Sbjct: 62  SLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIATRITILNKAA--PLPFHAHENPGEE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGARDFLVP
Sbjct: 118 TRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGARDFLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLDME +F
Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V + D+ + +E+++R +F+E  + + ++  F R+ + +A+RRYG+DKPDLR  + + +V 
Sbjct: 237 VRERDVQDFVEDMIRSIFKEVVDVD-LAAQFPRMTWAEAMRRYGSDKPDLRIALELIDVA 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           E    SEF VF+   +   G  V A+   GG   +R   D     A   G  GLAYI  +
Sbjct: 296 ELVKASEFPVFTAAANDADG-RVAALRIPGGAALSRKQIDEYAAHAAKYGSKGLAYI--K 352

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           L ++G V+   P+AK  +     A+   +   +GD  FF AG       F    R    +
Sbjct: 353 LSDTGEVS--SPIAKFFSEDAFAALLKHVGAGNGDIVFFGAGRYNTVSDFMGALRLKAGK 410

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +  +I  + +   W+ DFP +EW++E ++    H+PFT P    +  L+ N   ++ +  
Sbjct: 411 DFKLI-ADGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARTAV-SRG 468

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGGIA 
Sbjct: 469 YDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIAF 528

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   PK++
Sbjct: 529 GIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQV--RPKQL 583


>gi|331647463|ref|ZP_08348555.1| aspartate--tRNA ligase [Escherichia coli M605]
 gi|281178936|dbj|BAI55266.1| aspartyl-tRNA synthetase [Escherichia coli SE15]
 gi|330911676|gb|EGH40186.1| aspartyl-tRNA synthetase [Escherichia coli AA86]
 gi|331043187|gb|EGI15325.1| aspartate--tRNA ligase [Escherichia coli M605]
          Length = 590

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGSLRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586


>gi|194366904|ref|YP_002029514.1| aspartyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|238693500|sp|B4ST40|SYD_STRM5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|194349708|gb|ACF52831.1| aspartyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 583

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/590 (38%), Positives = 342/590 (57%), Gaps = 16/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV    D+A  F +A 
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNQGGVCFIDLRDHEGIVQVTVEVDNAEVFAVAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+  E VL ++G+V +R A  +N  + TG++E+ A  I +L+ A   PLP        E 
Sbjct: 62  SLGYEDVLQVEGVVRARHA--VNDKMRTGKVEVIATAITVLNKAA--PLPFHAHENPGEE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +    R +++ ++R  +  + F +  TPILT ++PEGARDFLVP
Sbjct: 118 TRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDEKGFQDIETPILTKATPEGARDFLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLDME +F
Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V + D+ + +E+++RG+F+E  N   +  +F R+ + +A+RRYG+DKPDLR  + + +V 
Sbjct: 237 VRERDVQDFVEDMIRGIFKEVVNVE-LDASFPRMTWAEAMRRYGSDKPDLRIALELVDVA 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           E   +SEF VF+   +   G  V A+   GG   +R   D     A   G  GLAYI  +
Sbjct: 296 ELVKNSEFPVFTGPANDADG-RVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLAYI--K 352

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + ++G V+   P+ K  +  +  A+   +   +GD  FF AG   K   F    R    +
Sbjct: 353 IADNGEVS--SPIQKFFSEESFAALVAHVGAGNGDIVFFGAGGYNKVSDFMGALRLKAGK 410

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           + G++  + +   W+ DFP +EW+EEE++    H+PFT P    +  L+ N   ++    
Sbjct: 411 DFGLV-ADGWAPLWVTDFPMFEWDEEEQRYVALHHPFTAPAVDDIADLRANARTAVSR-G 468

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGGIA 
Sbjct: 469 YDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIAF 528

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIDRI  L+ G +++R+V  FP +    DL+  +PS +   QL E+ +++
Sbjct: 529 GIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIVDAQLAEVHIQV 578


>gi|26248132|ref|NP_754172.1| aspartyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91211091|ref|YP_541077.1| aspartyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110641984|ref|YP_669714.1| aspartyl-tRNA synthetase [Escherichia coli 536]
 gi|117624018|ref|YP_852931.1| aspartyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|191172971|ref|ZP_03034505.1| aspartyl-tRNA synthetase [Escherichia coli F11]
 gi|218558731|ref|YP_002391644.1| aspartyl-tRNA synthetase [Escherichia coli S88]
 gi|218689804|ref|YP_002398016.1| aspartyl-tRNA synthetase [Escherichia coli ED1a]
 gi|227885706|ref|ZP_04003511.1| aspartyl-tRNA synthetase [Escherichia coli 83972]
 gi|237705820|ref|ZP_04536301.1| aspartyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|300982170|ref|ZP_07175905.1| aspartyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300994105|ref|ZP_07180688.1| aspartyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301050780|ref|ZP_07197637.1| aspartyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|306814304|ref|ZP_07448470.1| aspartyl-tRNA synthetase [Escherichia coli NC101]
 gi|331657915|ref|ZP_08358877.1| aspartate--tRNA ligase [Escherichia coli TA206]
 gi|29336537|sp|Q8FGQ9|SYD_ECOL6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123266056|sp|Q1RAR8|SYD_ECOUT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123343924|sp|Q0TGW6|SYD_ECOL5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225343|sp|A1AC27|SYD_ECOK1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226736536|sp|B7MBS5|SYD_ECO45 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781733|sp|B7MVZ7|SYD_ECO81 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|26108535|gb|AAN80737.1|AE016761_312 Aspartyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91072665|gb|ABE07546.1| aspartyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110343576|gb|ABG69813.1| aspartyl-tRNA synthetase [Escherichia coli 536]
 gi|115513142|gb|ABJ01217.1| aspartyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|190906682|gb|EDV66287.1| aspartyl-tRNA synthetase [Escherichia coli F11]
 gi|218365500|emb|CAR03227.1| aspartyl-tRNA synthetase [Escherichia coli S88]
 gi|218427368|emb|CAR08263.2| aspartyl-tRNA synthetase [Escherichia coli ED1a]
 gi|226900577|gb|EEH86836.1| aspartyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|227837279|gb|EEJ47745.1| aspartyl-tRNA synthetase [Escherichia coli 83972]
 gi|294492571|gb|ADE91327.1| aspartyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|300297535|gb|EFJ53920.1| aspartyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300307326|gb|EFJ61846.1| aspartyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300406367|gb|EFJ89905.1| aspartyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|305852463|gb|EFM52914.1| aspartyl-tRNA synthetase [Escherichia coli NC101]
 gi|307553885|gb|ADN46660.1| aspartate tRNA synthetase [Escherichia coli ABU 83972]
 gi|307626651|gb|ADN70955.1| aspartyl-tRNA synthetase [Escherichia coli UM146]
 gi|312946466|gb|ADR27293.1| aspartyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315286565|gb|EFU46000.1| aspartyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315290345|gb|EFU49721.1| aspartyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315296557|gb|EFU55854.1| aspartyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|323952368|gb|EGB48241.1| aspartyl-tRNA synthetase [Escherichia coli H252]
 gi|323956497|gb|EGB52239.1| aspartyl-tRNA synthetase [Escherichia coli H263]
 gi|324007227|gb|EGB76446.1| aspartyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|324012865|gb|EGB82084.1| aspartyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|331056163|gb|EGI28172.1| aspartate--tRNA ligase [Escherichia coli TA206]
          Length = 590

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586


>gi|157375167|ref|YP_001473767.1| aspartyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189082144|sp|A8FUW6|SYD_SHESH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157317541|gb|ABV36639.1| aspartyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 595

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/603 (37%), Positives = 342/603 (56%), Gaps = 30/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CGD+  S VG  V L GWV+R R  GG++FLD+RD  GI QVV +PD    F++A 
Sbjct: 2   RSQYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+ + + GLV +R    +N ++ TG+IE+  + + IL+ A  LP+ +   +   E 
Sbjct: 62  TLRSEFCVQVTGLVRARPDSQVNKDMRTGEIEILGKGLTILNSAAPLPINMDKNQHNTEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   IV R+++ +++R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMADRIVFRSKVTSAVRRFLDDSGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   +++   E + RG+F++  N +     F ++ + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MSSAEVMAKTEEMTRGLFKDLLNVDL--GEFPKMTFAEAMRRFGSDKPDLRNPLELIDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF +  + +P   V  +   GG   +R   D   ++A   G  GLA++   
Sbjct: 299 DILKDVEFKVFQEPAN-DPAGRVAVLCIPGGAKLSRKQLDEYAKYATIYGAKGLAWMKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             + G      PV K LN      +  R + + GD              F AD  N +A+
Sbjct: 358 DLDKGLEGIQSPVLKFLNEDVVNGLLERTNAKTGD-----------LILFGADKANIVAE 406

Query: 423 ELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKG 471
            +G +     E            W++DFP +E    +  +   H+PFT P G   E L+ 
Sbjct: 407 AMGALRLKAGEDFDLLNGEWKPLWVVDFPMFEPT-SDGGLHAMHHPFTAPMGITPEQLEA 465

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +   +I    YD+V NG E+  G +R H SE+    F  +GI +E    +FG L  A + 
Sbjct: 466 DPTAAISD-AYDMVLNGCELGGGSVRIHNSEMQSAVFRILGIEEEEANEKFGFLLEALRY 524

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPH G+A G+DRIVML+ GA ++R+V  FP +      L  +P   +  QL ELG+ +
Sbjct: 525 GTPPHAGLAFGLDRIVMLMTGATSIRDVMAFPKTTTAACPLTNAPGFANPAQLVELGVNV 584

Query: 592 VEN 594
           +E+
Sbjct: 585 IES 587


>gi|113954533|ref|YP_732041.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|113881884|gb|ABI46842.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 622

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 222/599 (37%), Positives = 341/599 (56%), Gaps = 20/599 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL  + +   V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 13  RSNGCGDLRDTHIDETVQLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGADAFAVA 72

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPV--FGERE 119
           + +RSE VL + G+V +R  E++N  + TG +E+ A  I +L SV   LP PV    E  
Sbjct: 73  EHLRSETVLQVQGMVRARPDESLNDRLATGAVEVLASNIHVLNSVKGTLPFPVSVHDEEN 132

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++RFLDLRR  ++ N+  R + I + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 133 TREELRLRHRFLDLRRKRMNDNLRLRAQTIQTARRFLEDEGFIEVETPVLTRSTPEGARD 192

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLDM
Sbjct: 193 YILPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDM 251

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ Q+ IL   E ++  +++    G  +   F R+ + +A+ RYGTD+PD R  + +
Sbjct: 252 EMSFMGQEQILELNERLIAAIWKTI-KGIDLPLPFPRLTWHEAMERYGTDRPDTRYGMEL 310

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG---GNRAFCDRMNEWARSQGQPGL 356
            NV++      F+VFS   +V  G  V  I   GG     N       + ++ +Q     
Sbjct: 311 TNVSDIVKDMGFKVFSG--AVKSGGSVKCIAVSGGNDAVSNVRIKPGGDVFSEAQAAGAG 368

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
              F R+ E G +  +G +  +L+    + +  R   + G    F AGD           
Sbjct: 369 GLAFIRVREGGEIDTIGAIKDNLSDEQKQTLLQRTGAEPGTLLLFGAGDTATVNKALDRV 428

Query: 417 RNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMES 468
           R ++A+E+G++      + + F W++DFP +E+N++E +++  H+PF  P     G    
Sbjct: 429 RQYLAKEMGLVKPDRENDQWNFLWVVDFPMFEFNKDENRLEALHHPFCAPNTSDLGDKAE 488

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
                L + +A  YDLV NG E+  G +R H S +  +  +++G++ E  + +FG L  A
Sbjct: 489 EWAKTLPTARAQAYDLVLNGLELGGGSLRIHDSALQREVLNSIGLAPEEAQEQFGFLVDA 548

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
              G PPHGG+A G+DR+VMLL G  ++R+   FP +Q    L+  +P+ VS  QL +L
Sbjct: 549 LDMGAPPHGGLAFGVDRMVMLLAGEDSIRDTIAFPKTQQARCLMTAAPAGVSERQLEDL 607


>gi|168187503|ref|ZP_02622138.1| aspartyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169294589|gb|EDS76722.1| aspartyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 593

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 228/592 (38%), Positives = 345/592 (58%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RT  CG+L  S +G    + GWV R R  GG++F+D+RD  GI QVV     D   FE A
Sbjct: 10  RTVMCGELRESHIGQKHVVMGWVQRKRNLGGLVFVDLRDREGILQVVFGEEIDKEAFEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             V+ E+ + ++G ++ R  ++ N ++ TG +EL  Q I+ILS +E  P+ +  + +  E
Sbjct: 70  DLVKPEYCIAVEGELVKR--QSPNESMPTGMVELKGQNIKILSESETPPIYIKEDLDTDE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + +    R +    +R  +    F+E  TP+LT S+PEGARD+LV
Sbjct: 128 AVRLKYRYLDLRRPDMQRIFKIRHKTAKVLRDFLDENGFLEMETPMLTKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+S
Sbjct: 188 PSRNYPGMFYALPQSPQLFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQVDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +D++   E +++ VF+E +N + V     RI Y +A+ +YG+DKPDLR  + ++++
Sbjct: 247 FVDMEDVIALNERLIQKVFKEIANVD-VQLPIQRITYKEAMDKYGSDKPDLRFGMEINDI 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           T+     +F+VF    ++  G  V AI A       R   D++ E+ ++    GLA+I +
Sbjct: 306 TDAVKDVDFKVFKD--AIENGGSVRAIKAPNCATMGRKQIDKLGEFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           + DE  +     P+AK L       +   LD + GD    +A  D +   S  A  R  +
Sbjct: 364 KEDEIKS-----PIAKFLGEEGINKVIESLDAKIGDLVLIVADKDSVVLQSLGA-LRLEM 417

Query: 421 AQELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           A+ L I+  N  F F W+ +FP   +NEEE +    H+PFTM          +D   ++A
Sbjct: 418 AKRLEILKDNKEFRFAWVTEFPLLSYNEEEDRYQAEHHPFTMSMDEDIQYLESDPGRVRA 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H +++  + F+ +G + E    RFG L  AF+ G PPHGG+
Sbjct: 478 KAYDIVLNGEELGGGSIRIHDTKLQEKMFNVLGFTSESAWERFGFLLEAFKFGPPPHGGL 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G DR++M L G +N+++V  FP +QN    L  +P+ V  +QL ELG+ +
Sbjct: 538 AYGFDRMIMFLAGTENIKDVIAFPKNQNAYCPLTEAPNVVDEKQLGELGIAL 589


>gi|300705177|ref|YP_003746780.1| aspartate tRNA synthetase [Ralstonia solanacearum CFBP2957]
 gi|299072841|emb|CBJ44197.1| aspartate tRNA synthetase [Ralstonia solanacearum CFBP2957]
          Length = 622

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/599 (38%), Positives = 340/599 (56%), Gaps = 22/599 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V LSGW HR R HGG+IF+D+RD  G+ QVV +PD    F++A+
Sbjct: 19  RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 78

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L + G+V +R   T N N+ +G++E+   ++ +L+ +   P  +  +    E+
Sbjct: 79  GVRNEFCLQVKGIVRARPEGTTNPNLASGKVEVLCHELTVLNASVTPPFQL-DDDNLSET 137

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 138 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVP 197

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 198 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 256

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS----NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           + + +I +  E ++R VF+     NT+S      F  + + +A+ R+G+DKPDLR  +  
Sbjct: 257 LGEQEIRDLFEEMIRTVFK-----NTMSVELDATFPVMEFREAMARFGSDKPDLRVKLEF 311

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358
            +VT+     +F+VFS   +   G  V A+   GGG  +R   D   ++    G  GLA+
Sbjct: 312 TDVTDVMKDVDFKVFSNPANAEGG-RVVALRVPGGGALSRGDIDAYTKFVEIYGAKGLAW 370

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-- 416
           +       G      P+ K+L+      I  R   QDGD  FF A D  K  + A  A  
Sbjct: 371 VKVNEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGA-DRAKVVNDAMGALR 429

Query: 417 ----RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                +   +  G+   + ++  W++DFP +E++EE+ +    H+PFT P+         
Sbjct: 430 LKIGHSEFGKSTGLFE-DAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLET 488

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D     A  YD+V NG+EI  G +R    EV  + F  + I +E    +FG L  A Q G
Sbjct: 489 DPGKCIAKAYDMVLNGWEIGGGSVRIFQEEVQSKVFRALKIGEEEARAKFGFLLDALQYG 548

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            PPHGGIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+
Sbjct: 549 APPHGGIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL 607


>gi|303237382|ref|ZP_07323952.1| aspartate--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302482769|gb|EFL45794.1| aspartate--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 586

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 220/597 (36%), Positives = 340/597 (56%), Gaps = 25/597 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YR  +CG+L ++D    V L+GWV R R  GG+ F+D+RD YGITQ+V N   D+   E 
Sbjct: 2   YRNKTCGELRLTDASKEVILAGWVQRTRKMGGMTFVDLRDRYGITQLVFNEAEDAGLCEE 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + I G+V  R ++  N+ I TG+IE+  +++ +LS +   P  +    +  
Sbjct: 62  ANKLGREYCIQIKGIVSERQSK--NSKIPTGEIEIIVKELNVLSSSVTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  +  N+  R R+   +R  +   NFIE  TPIL  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRPAVRSNLELRHRMTILIRNFLDNLNFIEVETPILIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV Q+D+L   E++ R +F+E   G  +     ++ + +A++RYG+DKPD+R  +    
Sbjct: 239 SFVNQEDVLKVFEDMSRHLFKEI-RGVELPEKLEQMTWQEAMKRYGSDKPDIRFGMEFVE 297

Query: 302 VTEHFV-HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359
           + +     S+F VF++   +        +P       +   +  +   R Q G  GL YI
Sbjct: 298 LMDDLKGTSDFSVFNEANYIGG----IVVPGCADYSRKQLNELTDFVKRPQVGAKGLVYI 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-----LKFCSFAA 414
            +      N      + K       + ++     ++GD    ++GD      ++ C+   
Sbjct: 354 KY----GENGEAKSSIDKFFTQEQLQKVKETTGAKNGDLVLILSGDHVNKTRVQLCAL-- 407

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L     
Sbjct: 408 --RLEMGNRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDLHLLDTHP 465

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YD VCNG E+  G IR H +E+  + F  +G +++  E +FG L  AF  G P
Sbjct: 466 EQVRALAYDFVCNGIEVGGGSIRIHDTELQEKMFEVLGFTRQQAEEQFGFLMNAFHYGAP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PH GIA G+DR V ++ G  ++R+V  FP + +  D+++ +PS ++ +QL EL +++
Sbjct: 526 PHAGIAFGLDRYVSIMAGLDSIRDVIAFPKNNSGRDVMLDAPSNLADKQLDELQIKL 582


>gi|167561588|ref|ZP_02354504.1| aspartyl-tRNA synthetase [Burkholderia oklahomensis EO147]
 gi|167568824|ref|ZP_02361698.1| aspartyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 600

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/601 (38%), Positives = 337/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + I GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQIKGLVRGRPEGTINAGLKSGKIEVLCHELNVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +   ++  F  + + +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LAAKFPVMPHSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KG    R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGAELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   +DGD  FF A D  K  + +  A       
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++E+ +   AH+PFT P+         D    
Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  +V  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREDVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENP 595
           GIA G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+   E P
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQP 598

Query: 596 K 596
           K
Sbjct: 599 K 599


>gi|227890855|ref|ZP_04008660.1| aspartyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867264|gb|EEJ74685.1| aspartyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 590

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 222/592 (37%), Positives = 343/592 (57%), Gaps = 18/592 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFE 60
           RT   G +    +   V L GWV + R  G +IF+D+RD  GI Q+V     NP++   +
Sbjct: 3   RTTYAGLVDEKYLDQEVCLKGWVQKRRNLGNLIFIDLRDIEGIVQLVFSQEFNPEA--LK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSE+V+ + G V++R  + IN N+ TG++E+    IEIL+ A+  P  +  +   
Sbjct: 61  VAEQLRSEYVIEVKGKVVARGEKAINPNMRTGKVEVEVSDIEILNKAKTTPFDIADDINA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R +YR+LDLRR  + K ++ R RI  ++   +   +F++  TP LT S+PEGARD+
Sbjct: 121 SDDLRLQYRYLDLRRPEMQKALMIRNRITQTVHSYLDENHFLDIETPYLTRSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  G FYALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R DR P EF Q+D+E
Sbjct: 181 LVPSRVYPGHFYALPQSPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQP-EFTQIDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  ++I    E +L+ V +E  + + +     RI +++A+ R+G+DKPD+R  + + 
Sbjct: 240 TSFMSAEEIQEMTEGLLKRVMKETLDVD-IKTPIQRITWNEAMDRFGSDKPDIRFGMELK 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +++    ++ F+VF   +++  G +V AI   GG    +R   +   E+ +  G  GLA+
Sbjct: 299 DMSGAVQNAGFKVFD--MTLENGGQVKAITVPGGADKYSRKQIEEKQEYIKRFGAKGLAW 356

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  ++ + G     GP+AK       E I+   + + GD   F+A +           R 
Sbjct: 357 V--KVTDDGLT---GPIAKFFT-ERAEDIKAAAEAKSGDLILFVASNRKVVADSLGYLRV 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+E+ +IN + F F W++D+P +E++EE  +   AH+PFTMP      L   D     
Sbjct: 411 AIAKEMDMINKDEFAFIWVVDWPLFEYSEEFDRYIAAHHPFTMPNEEDLDLLETDPHKCH 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G IR H  ++    F  +G +KE  E +FG    A   G PPHGG
Sbjct: 471 AQSYDIVLNGYELGGGSIRIHRRDIQEAMFKALGFTKEKAEEQFGWFMDALDFGFPPHGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           +A G+DR  MLL G  N+REV  FP +    + L  +PSTV+ +QL EL L+
Sbjct: 531 LALGLDRFAMLLAGKDNIREVIAFPKNSKASEPLTHAPSTVAPKQLDELYLK 582


>gi|300723087|ref|YP_003712385.1| aspartate tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297629602|emb|CBJ90205.1| aspartate tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 589

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 223/595 (37%), Positives = 343/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L ++  G  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    F  A 
Sbjct: 2   RTNYCGQLSLAHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQKEAFAQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ L I G+V +R    IN  + TG++E+ A+ + I + +E  PLP+   +   E 
Sbjct: 62  ELRNEFCLQITGIVRARPDSQINQEMATGEVEVFAESLMIFNRSE--PLPLDSNQNNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSQRLKTRAKITSFVRRFMDDAGFLDVETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGEFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R +++E    +   +NF  + +++A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAGQVREIMEKMIRELWQEVRGVDL--DNFPIMTFEEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF++  + NP   V  +   GG   +R   D   ++    G  GLA++   
Sbjct: 297 DLVKDVEFAVFAEPAN-NPKGRVATLCVPGGAELSRKQIDEYGKFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK L+    E +  R + +DGD  FF A             R  + +
Sbjct: 356 NRAAGVEGVQSPIAKFLSAEVVEGLLARTNAKDGDILFFGADKKNVVTDAMGALRLKLGR 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L I +   ++  W++DFP +E N  E  +   H+PFT P+    S   ++  S  A  Y
Sbjct: 416 DLNITDLASWKPLWVIDFPMFEEN-GEGGLTAMHHPFTSPRDMSASELESNPESAIANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H +E+    F  +GI+++  + +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHRNEMQQIVFRILGINEQEQQEKFGFLLNALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL    N+R+V  FP +     L+  +PS  +   L EL + +V+  ++
Sbjct: 535 LDRLVMLLTNTDNIRDVIAFPKTTAASCLMTDAPSLANPSSLEELAISVVKKERE 589


>gi|218699562|ref|YP_002407191.1| aspartyl-tRNA synthetase [Escherichia coli IAI39]
 gi|226736537|sp|B7NS52|SYD_ECO7I RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218369548|emb|CAR17317.1| aspartyl-tRNA synthetase [Escherichia coli IAI39]
          Length = 590

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVASAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586


>gi|222033615|emb|CAP76356.1| Aspartyl-tRNA synthetase [Escherichia coli LF82]
          Length = 590

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLAMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586


>gi|332528585|ref|ZP_08404567.1| aspartyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332041901|gb|EGI78245.1| aspartyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 597

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/594 (38%), Positives = 340/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD    F++A+
Sbjct: 4   RSHYCGLVTEALLGQTVTLCGWVNRRRDHGGVIFVDLRDREGYVQVVCDPDRPEMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + GLV +R A T N  + +G+IE+   ++ +L+ +   P  +  E    E+
Sbjct: 64  DLRNEFCVQVKGLVRARPAGTTNDGLKSGKIEVLCHELTVLNPSVTPPFQLDDE-NLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N++ R R+   +R  + A  FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPYMQNNLMLRYRVAMEVRKFLDANGFIDVETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRVHDGMFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + DI +  + +++ VF+     +     F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LTEQDIRDMFQGMIKTVFQNVLGIDL--GEFPVMAYSEAMHRFGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS       G  V A+   GGG  +R   D   E+ +  G  GLA+I   
Sbjct: 300 DVMKDVDFKVFSTPAQAKGG-RVVALRVPGGGEMSRGEIDGYTEFVKIYGAKGLAWIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      P+ K+L+      I  R   +DGD  FF A D  K  + +  A R  I 
Sbjct: 359 EVAKGRDGLQSPIVKNLHDAAIAEILKRTGAKDGDLIFFGA-DKAKIVNDSIGALRIKIG 417

Query: 422 QELGIINCNCFEF----CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
                     FE      W++DFP +E++E+E++    H+PFT P+ G E     D    
Sbjct: 418 HSEFGKKSGLFEARWAPMWVVDFPMFEYDEDEQRWSAVHHPFTAPKDGHEDWMVTDPEKC 477

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H ++V  + F  + I  +    +FG L  A Q G PPHG
Sbjct: 478 IAKGYDMVLNGWEIGGGSVRIHRADVQAKVFDALKIGPDEQRLKFGFLLDALQYGAPPHG 537

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DRIV L+ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+
Sbjct: 538 GLAFGLDRIVTLMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRL 591


>gi|288802549|ref|ZP_06407988.1| aspartate--tRNA ligase [Prevotella melaninogenica D18]
 gi|302346403|ref|YP_003814701.1| aspartate--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|288335077|gb|EFC73513.1| aspartate--tRNA ligase [Prevotella melaninogenica D18]
 gi|302150945|gb|ADK97206.1| aspartate--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 585

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/602 (37%), Positives = 346/602 (57%), Gaps = 36/602 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSA--CFE 60
           YRT++CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N  D+A  C E
Sbjct: 2   YRTNTCGELRLSDAGKEVTLAGWVQRARKMGGMTFVDLRDRYGITQLVFNEADNADLCGE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K  R E+ + + G+V  R ++  N+ I TG IE+ A+++++LS +E  P  +    + 
Sbjct: 62  ANKLGR-EYCIQVKGVVNERQSK--NSKIPTGDIEIIAKELKVLSSSETPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR+ + KN+  R R+   +R  + A  F+E  TPIL  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRREAVRKNMELRHRMTILIRNFLDAAQFMEVETPILIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++N  E + R +F E            ++ + DA++RYG+DKPDLR  +   
Sbjct: 238 MSFVDQDDVINLFEEMARHLFREIRGVEL--PKLEQMKWHDAMKRYGSDKPDLRFGMEFV 295

Query: 301 NVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAY 358
            + +    +  F VF +   +        +P       +   +  +   R Q G  GL +
Sbjct: 296 ELMDDLKGTGSFSVFDEAAYIGG----IVVPGCADYSRKQLNELTDFVKRPQVGAQGLVF 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTE----AIRVRLDMQDGDSCFFIAGD-----PLKF 409
           I +  D        G +   ++   TE     ++     +DGD    ++G+      ++ 
Sbjct: 352 IKYNAD--------GTIKSSIDKFYTEEQLLKVKETTGAKDGDLVLILSGNNVRKTQVQL 403

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
           CS     R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L
Sbjct: 404 CSL----RLEMGDRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIKL 459

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
                  ++A  YD VCNG E+  G +R H +++  + F  +G + E  + +FG L  AF
Sbjct: 460 LDEHPEQVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTPESAKAQFGFLMNAF 519

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPH G+A G+DR V ++ G  ++R+   FP + +  D+++ +PS +  +QL EL +
Sbjct: 520 KYGAPPHAGLAFGLDRFVSIMAGLDSIRDCIAFPKNNSGRDVMLDAPSFIDQKQLDELEI 579

Query: 590 RI 591
           ++
Sbjct: 580 KL 581


>gi|17545185|ref|NP_518587.1| aspartyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|24212408|sp|Q8Y270|SYD_RALSO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|17427476|emb|CAD13994.1| probable aspartyl-trna synthetase (aspartate--trna ligase)(asprs)
           protein [Ralstonia solanacearum GMI1000]
          Length = 605

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/595 (38%), Positives = 337/595 (56%), Gaps = 14/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V LSGW HR R HGG+IF+D+RD  G+ QVV +PD    F++A+
Sbjct: 2   RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L + G+V +R   T N N+ +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 62  GVRNEFCLQVKGIVRARPEGTTNPNLASGKIEVLCHELTVLNASVTPPFQL-DDDNLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 181 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+  +    +   F  + + +A+ R+G+DKPDLR  +    +T
Sbjct: 240 LSEQEIRDLFEEMIRTVFQN-TMSVALDAKFPVMEFREAMARFGSDKPDLRVKLEFTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  V A+   GG   +R   D   ++    G  GLA+I   
Sbjct: 299 DAMKDVDFKVFSGPANAEGG-RVVALRVPGGAALSRGDIDAYTKFVEIYGAKGLAWIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416
               G      P+ K+L+      I  R   QDGD  FF A D  K  + A  A      
Sbjct: 358 EVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGA-DRAKVVNDAMGALRLKVG 416

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +  A+  G+   + ++  W++DFP +E++EE+ +    H+PFT P+         D   
Sbjct: 417 HSDFAKSTGLFE-DAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGK 475

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G +R +  EV  + F  + I  E    +FG L  A Q G PPH
Sbjct: 476 CIAKAYDMVLNGWEIGGGSVRIYREEVQSKVFRALKIGDEEARAKFGFLLDALQYGAPPH 535

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GGIA G+DR+V ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+
Sbjct: 536 GGIAFGLDRVVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL 590


>gi|320657964|gb|EFX25726.1| aspartyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
          Length = 590

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D  + + +  G  GLAYI   
Sbjct: 297 DLLRSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYDNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIQVVKK 586


>gi|89889509|ref|ZP_01201020.1| aspartyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89517782|gb|EAS20438.1| aspartyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 582

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/597 (36%), Positives = 341/597 (57%), Gaps = 25/597 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60
           YR+H CG L  SDV   V L+GWV + R  G ++++D+RD YG+TQ++ +    D A  E
Sbjct: 2   YRSHDCGSLRASDVNKEVTLAGWVQKSRDKGFMVWVDLRDRYGVTQLIFDEERTDKALLE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +  E+V+ + G V+ R  E+ NA + TG +E+  +++ ILS ++  P  +    + 
Sbjct: 62  RAQKLGREFVIQVKGTVIER--ESKNAKMSTGDVEILVKELTILSESKTPPFTIEDNTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR+ + +N++ R+++   +R  +  ++FIE  TP+L  S+PEGARDF
Sbjct: 120 GEELRMKYRYLDIRRNPVRENLIFRSKVAMEVRNFLAGKDFIEVETPVLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+LN  E++ R + ++  N +    NF R+ Y+DA+++YG DKPD+R  +   
Sbjct: 239 MSFVEQEDVLNIFEDMTRHLLKKVKNIDVA--NFPRMTYEDAMKKYGNDKPDIRFGMEFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
            +       +F++F      N    V  I   G     R   D++ +W R      L  +
Sbjct: 297 ELDAFAKAKDFKIF------NEAELVVGIAVPGANSYTRKEIDKLIDWVRRPQVGALGMV 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R +E G       V K  +  +          + GD    ++G   K  +  +  R  
Sbjct: 351 YVRCNEDGTYK--SSVDKFYDQEDLANWAKATGAKAGDLICVLSGPANKTRTQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMESLKGNDLL 475
           +A+ LG+ +   F   W++DFP  EW+E+ ++    H+PFT P+      +E+  GN   
Sbjct: 409 MAERLGLRDPEVFAPLWVVDFPLLEWDEDTERYHAMHHPFTSPKPEDIDKLETDPGN--- 465

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            ++A  YDLV NG EI  G +R    ++    F ++G + +    +FG L  AF+ G PP
Sbjct: 466 -VRANAYDLVMNGNEIGGGSVRIFDKKLQALMFDHLGFTPDEARAQFGFLMDAFEYGAPP 524

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           H G+A G DR+V +L G + +R+   FP + +  D+++ +PS +  EQL EL L++ 
Sbjct: 525 HAGLAFGFDRLVSILGGQETIRDFIAFPKNNSGRDVMIDAPSAIDQEQLTELNLKVT 581


>gi|227544925|ref|ZP_03974974.1| aspartate--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300910047|ref|ZP_07127507.1| aspartate--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185092|gb|EEI65163.1| aspartate--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300892695|gb|EFK86055.1| aspartate--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 600

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 228/596 (38%), Positives = 343/596 (57%), Gaps = 16/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT+  GD     VG  V L GWV + R  GG+IF+D+ D  GI Q+V N   +   FEIA
Sbjct: 3   RTNYAGDTNEQQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKENPEAFEIA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +VR+++VL + G V  R+ + IN ++ TG++E++  K+++L+ +E  P  +    +  E
Sbjct: 63  NAVRNQYVLEVQGKVQLRAEKEINPDMKTGKVEVAVDKVKVLAKSETTPFDITDGVDASE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + +N+  R+++ + +      E F++  TP LT S+PEGARD++V
Sbjct: 123 DLRMKYRYLDLRRPEMMRNLKLRSKVASIVHNYYDNEGFMDVETPDLTRSTPEGARDYIV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLMA+G D+Y+Q+A CFRDED R DR P EF Q+D EMS
Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQP-EFTQIDTEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +DI    E +++ V +E   G  V   F R+ + +A+ +YG+DKPD R  +++H++
Sbjct: 242 FATPEDIQTVTEGLIKRVMKEIV-GVDVKTPFPRMEWQEAMDKYGSDKPDTRFGMLIHDL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++    S F+VF+   +V  G  V AI   GG    +R    +  E+ +  G  GLA++ 
Sbjct: 301 SDIVKDSSFKVFAN--TVADGNYVRAIRVPGGADKYSRKDISKYEEYIKRFGAKGLAWVK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GPVAK LN      I   +D ++GD   F+AG            R  I
Sbjct: 359 VTADGYN-----GPVAKFLND-QVAQINEEMDAKEGDLILFVAGSFHVVSDSLGYLRRTI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLK-GNDLLSIK 478
           A+EL +I  + + + W++++P +E++E   K   AH+PFTM  +  +  L+ G D     
Sbjct: 413 AEELDMIKPDQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAH 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD++ NG EI  G IR H  ++  +    +G +KE  E RFG L +A   GMPP GG
Sbjct: 473 AQSYDIILNGNEIGGGSIRIHDPKIQEKVLKALGYTKERAEARFGFLLKALTMGMPPEGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL  A ++R+V  FP +    + L  +P  VS +QL +L +   E 
Sbjct: 533 LAFGLDRWVMLLAQADSIRDVIPFPKNSKAVEPLTAAPGKVSEQQLDDLKIEFDEK 588


>gi|160872166|ref|ZP_02062298.1| aspartyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120965|gb|EDP46303.1| aspartyl-tRNA synthetase [Rickettsiella grylli]
          Length = 590

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/592 (38%), Positives = 335/592 (56%), Gaps = 12/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH C  L  + V   V + GWVH  R HGGIIF+D+RD  G+ QVV NP+ S  F+ A+
Sbjct: 3   RTHYCQQLNSNLVNETVHVCGWVHHRRDHGGIIFIDLRDRSGLLQVVFNPEQSELFKQAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+V+ I G +  R   T N  + +G IEL    + IL+ +  LP+ +       E 
Sbjct: 63  TLRNEYVVQISGEIRLRPQGTENTQLKSGNIELKPTALIILNTSAPLPISIDAYTPVSEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +  +YR+LDLRR  + +   +RT ++  +R     + F+E  TP+LT ++PEGARD+LVP
Sbjct: 123 VALRYRYLDLRRSEVQERFRRRTEMVKLIRHFYEEKGFLEIETPVLTKATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+  G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF QLDMEMSF
Sbjct: 183 SRIYPGEFYALPQSPQLFKQLLMIAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDMEMSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
             ++DI    E+++  +F++    + +   F R+ Y  A++RYG+DKPDLR P  + ++ 
Sbjct: 242 CSEEDIQTLNESLICYLFKKLLAVD-LPCPFPRLSYATAMQRYGSDKPDLRIPFELVDIA 300

Query: 304 EHFVHSEFRVFSK-ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   +  F+VFS      N       IP +G    R   +    +A   G  GLAY+   
Sbjct: 301 DLVENITFKVFSDPAKDANARVTALRIP-QGAELTRKAIETYTHYAAIFGAKGLAYL-KV 358

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            D S  V G+  P+ K +      AI  R+D + GD  FF AGD           R  + 
Sbjct: 359 FDPSQGVKGLQSPILKFIPDAVVNAILQRVDAKKGDIIFFGAGDAKIVSESLGALRVKLG 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKA 479
            +   I    F   W++DFP +E+ +EEK+    H+PFT P+     E L   +    +A
Sbjct: 419 HDFNCIKEGWFPL-WVVDFPLFEFEKEEKRWKALHHPFTAPKITNAAELLANPEACLSRA 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S +    F  + +S+   + +FG    A + G PPHGG+
Sbjct: 478 --YDMVLNGCEVGGGSIRIHDSAIQKAVFDRLTLSEAEQKEKFGFFLEALKFGCPPHGGM 535

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VML+  A+++R+V  FP +Q     L  +PS VS +QL+EL L+I
Sbjct: 536 AFGLDRLVMLMTNAQSIRDVIAFPKTQTGHCPLTHAPSLVSEQQLKELALQI 587


>gi|153832460|ref|ZP_01985127.1| aspartyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148871255|gb|EDL70127.1| aspartyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 592

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/595 (38%), Positives = 338/595 (56%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPESQVNKDMATGEVEILAKGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +  T E ++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVRATTEKMVREMWQELLNVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V  I   GG    R   D   E+    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN      I  R   + GD   F A             R  + +
Sbjct: 356 DRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+     +   W++DFP +E  ++E  +   H+PFT P G        +  +  +  Y
Sbjct: 416 DLGLTKEGTWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H +E+    F  +GI+ E  + +FG L  A + G PPH G+A G
Sbjct: 475 DMVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFGFLLDALKFGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K
Sbjct: 535 LDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVTVAKEK 589


>gi|121730021|ref|ZP_01682434.1| aspartyl-tRNA synthetase [Vibrio cholerae V52]
 gi|121628240|gb|EAX60758.1| aspartyl-tRNA synthetase [Vibrio cholerae V52]
          Length = 575

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/577 (40%), Positives = 338/577 (58%), Gaps = 13/577 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALCIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK L     +AI  R   Q GD   F   D  K  + A  A R    
Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +ELGI N + +   W++DFP +E +++E  +   H+PFT P     E LK N   ++ + 
Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEAL-SN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
            G+DR+VMLL G +N+R+V  FP +     L+  +PS
Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPS 569


>gi|94309323|ref|YP_582533.1| aspartyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|123081434|sp|Q1LRG2|SYD_RALME RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|93353175|gb|ABF07264.1| aspartyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 602

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/604 (37%), Positives = 343/604 (56%), Gaps = 13/604 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CF 59
           M   RTH CG +    +G  V L+GWV R R HGG+IF+D+RD  G+ QVV +PD    F
Sbjct: 1   MSSMRTHYCGLVTEQLIGQEVALTGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A+ +R+E+ + I G V  R A T NAN+ +G+IE+   ++ +L+ +   P  +  +  
Sbjct: 61  KAAEEIRNEFCIRITGKVRPRPAGTENANLTSGKIEVLCHELTVLNPSVTPPFQL-DDDN 119

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+ R  +R LDLRR  +  N+  R ++   +R  + A+ FI+  TP+L  S+PEGARD
Sbjct: 120 LSETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDAQGFIDIETPMLGKSTPEGARD 179

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D 
Sbjct: 180 YLVPSRVNPGHFFALPQSPQIFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDC 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E+++R VF+   + + +   F  + + +A+ R+G+DKPDLR  +  
Sbjct: 239 ETSFLTEQEIRDLFEDMMRTVFKNAIDVD-LDAKFPVMEFREAMARFGSDKPDLRVKLEF 297

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +TE     +F+VFS   + + G  V      GG  +R   D   ++    G  GLA+I
Sbjct: 298 TELTEVMKDVDFKVFSGPANSDNGRVVGLRVPGGGAISRGEIDAYTQFVAIYGAKGLAWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA--- 416
                  G      P+ K+L+      I  R   QDGD  FF A D  K  + A  A   
Sbjct: 358 KVNEVAKGRDGLQSPIVKNLHDAAIAEILKRTGAQDGDIIFFGA-DKAKIVNDAIGALRL 416

Query: 417 ---RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               +   +  G+   + ++  W++DFP +E++EE+ +    H+PFT P+         D
Sbjct: 417 KVGHSEFGKSTGLFE-DTWKPLWVIDFPMFEYDEEDARWVAMHHPFTSPKDEHLQYLETD 475

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                A  YD+V NG+E+  G +R +  +V  + F  + I+ E    +FG L  A Q G 
Sbjct: 476 PGKCIAKAYDMVLNGWEMGGGSVRIYREDVQSKVFRALKINDEEARAKFGYLLDALQYGA 535

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-V 592
           PPHGG+A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PSTV  +QLREL +R+  
Sbjct: 536 PPHGGLAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSTVDEKQLRELHIRLRA 595

Query: 593 ENPK 596
           + PK
Sbjct: 596 QEPK 599


>gi|194467778|ref|ZP_03073764.1| aspartyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194452631|gb|EDX41529.1| aspartyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 600

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 228/596 (38%), Positives = 343/596 (57%), Gaps = 16/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT+  GD     VG  V L GWV + R  GG+IF+D+ D  GI Q+V N   +   FEIA
Sbjct: 3   RTNYAGDTNEQQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKENPEAFEIA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +VR+++VL + G V  R+ + IN ++ TG++E++  K+++L+ +E  P  +    +  E
Sbjct: 63  NAVRNQYVLEVQGKVQLRAEKEINPDMKTGKVEVAVDKVKVLAKSETTPFDITDGVDASE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + +N+  R+++ + +      E F++  TP LT S+PEGARD++V
Sbjct: 123 DLRMKYRYLDLRRPEMMRNLKLRSKVASIVHNYYDNEGFMDVETPDLTRSTPEGARDYIV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLMA+G D+Y+Q+A CFRDED R DR P EF Q+D EMS
Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQP-EFTQIDTEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +DI    E +++ V +E   G  V   F R+ + +A+ +YG+DKPD R  +++H++
Sbjct: 242 FATPEDIQTVTEGLIKRVMKEIV-GVDVKTPFPRMEWQEAMDKYGSDKPDTRFGMLIHDL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++    S F+VF+   +V  G  V AI   GG    +R    +  E+ +  G  GLA++ 
Sbjct: 301 SDIVKDSSFKVFAN--TVADGNYVRAIRVPGGADKYSRKDISKYEEYIKRFGAKGLAWVK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GPVAK LN      I   +D ++GD   F+AG            R  I
Sbjct: 359 VTADGYN-----GPVAKFLND-QVAQINEEMDAKEGDLILFVAGSFHVVSDSLGYLRRAI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLK-GNDLLSIK 478
           A+EL +I  + + + W++++P +E++E   K   AH+PFTM  +  +  L+ G D     
Sbjct: 413 AEELDMIKPDQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAH 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD++ NG EI  G IR H  ++  +    +G +KE  E RFG L +A   GMPP GG
Sbjct: 473 AQSYDIILNGNEIGGGSIRIHDPKIQEKVLKALGYTKERAEARFGFLLKALTMGMPPEGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL  A ++R+V  FP +    + L  +P  VS +QL +L +   E 
Sbjct: 533 LAFGLDRWVMLLAQADSIRDVIPFPKNSKAVEPLTAAPGKVSEQQLDDLKIEFDEK 588


>gi|296117812|ref|ZP_06836395.1| aspartate--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295969043|gb|EFG82285.1| aspartate--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 618

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 235/599 (39%), Positives = 337/599 (56%), Gaps = 29/599 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L     G  V L+GWV R R HGG+IF+D+RD  G+ Q V   +S   E A  
Sbjct: 18  RTHLAGELRKELTGETVTLTGWVSRRRDHGGVIFIDLRDRSGLAQAVFR-ESEVAEQAHE 76

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYP 121
           +RSE+V+ + G+V +R   + N N+ +G+IEL+  ++E+L+ +  LP  +       E  
Sbjct: 77  LRSEFVVRVTGVVEARPEGSENPNLASGEIELNVTELEVLNKSAALPFQIDDPSTSGEVG 136

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R +YR+LDLRR      +  R+    + R  +    F E  TP LT S+PEGARDFL
Sbjct: 137 EEARLRYRYLDLRRKAQGDALRLRSAANRAARRVLDNHEFTEIETPTLTRSTPEGARDFL 196

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLLM +G +RY+Q+A C+RDED R+DR P EF QLD+EM
Sbjct: 197 VPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQLARCYRDEDFRADRQP-EFTQLDVEM 255

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E ++  +++    G  ++    R+ Y DA++ YG+DKPDLR  I +  
Sbjct: 256 SFVDQEDVIALGEEIIAELWKLI--GYEITTPIPRMTYADAMKYYGSDKPDLRFDIKLVE 313

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIF 360
            T+ F  + FRVF           V A+  +GG    R   D   EWA+ +G  GLAYI 
Sbjct: 314 CTDFFKDTTFRVFQNEY-------VGAVVMEGGASQPRRQFDAWQEWAKQRGAKGLAYI- 365

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +   GPVAK++     E I   +  + GD+ FF AGD     +    AR  I
Sbjct: 366 -TVAEDGTLG--GPVAKNITDAEREGIAEHVGAKPGDAIFFAAGDTKSSRALLGAARGEI 422

Query: 421 AQELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFA---------HNPFTMPQGGMESLK 470
           A++  +I    + F W++D P +E   E     D A         H+ FT P+       
Sbjct: 423 ARKNDLIKEGDWAFTWVVDAPMFEPAAEATASGDVALGNSSWTAVHHAFTSPKPEWLDSF 482

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            ++     A+ YD+VCNG EI  G IR H +EV  + F+ +GI +E  + +FG L  AFQ
Sbjct: 483 DDNPGEATAYAYDIVCNGNEIGGGSIRIHNAEVQKRVFNVMGIGEEEAQEKFGFLLDAFQ 542

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ +  +Q +E G+
Sbjct: 543 YGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPIPAQQRKETGV 601


>gi|146299008|ref|YP_001193599.1| aspartyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|189082098|sp|A5FKJ2|SYD_FLAJO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146153426|gb|ABQ04280.1| aspartyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 583

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 224/594 (37%), Positives = 336/594 (56%), Gaps = 21/594 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60
           YR+H+CG+L  S++ + V L+GWV + R  G + ++D+RD YGITQ++   +  D   FE
Sbjct: 2   YRSHNCGELNASNINTEVTLAGWVQKSRDKGFMNWVDLRDRYGITQLIFDESRTDKTVFE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +AK++  E+V+ + G V+ R A+  N NI TG+IE+   ++ IL+ A   P  +  E + 
Sbjct: 62  LAKTLGREFVIQVKGTVIEREAK--NKNIPTGEIEILVSELTILNTALTPPFTIEDETDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LD+RR+ +  +++ R ++   +R  +   +F E  TP L  S+PEGARDF
Sbjct: 120 GEDIRMKYRYLDIRRNPVKNSLLFRHKVAMEVRKYLSDLDFCEVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DILN  E + R + +E        + F RI YD A++ YG DKPD+R  +   
Sbjct: 239 MAFVEQEDILNVFEGLTRHLLKEIKGIEV--DKFPRITYDYAMKTYGNDKPDIRFGMKFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357
            + E   H EF VF      N    V  I   G G   R   D + +W +    G  G+ 
Sbjct: 297 ELNEFAQHKEFPVF------NAAELVVGIAVPGAGNYTRKEIDGLIDWVKRPQVGASGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  + +E G       V K  +  +        +   GD  F ++G   K  +  +  R
Sbjct: 351 YV--KCNEDGTYK--SSVDKFYDNDDLAKWAKATEANPGDMIFVLSGPANKTRAQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A  LG+ N   F   W++DFP  E +EE  +    H+PFT P+    +L   +   +
Sbjct: 407 MELATRLGLRNPEEFAPLWVVDFPLLELDEESGRYHAMHHPFTSPKPEDMALLETEPGKV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG EI  G IR H        F  +G ++E  + +FG L  AFQ G PPHG
Sbjct: 467 RANAYDMVLNGNEIGGGSIRIHDKATQQLMFKYLGFTEEEAKAQFGFLMDAFQFGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR+V +L G + +R+   FP + +  D+++ +P+ +   QL+EL ++I
Sbjct: 527 GLAFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAAIDDAQLKELHIKI 580


>gi|218548573|ref|YP_002382364.1| aspartyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226736541|sp|B7LPH8|SYD_ESCF3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218356114|emb|CAQ88731.1| aspartyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|323968288|gb|EGB63695.1| aspartyl-tRNA synthetase [Escherichia coli M863]
 gi|323977949|gb|EGB73035.1| aspartyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324113602|gb|EGC07577.1| aspartyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 590

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALSELSIQVVKK 586


>gi|307314222|ref|ZP_07593832.1| aspartyl-tRNA synthetase [Escherichia coli W]
 gi|306906191|gb|EFN36709.1| aspartyl-tRNA synthetase [Escherichia coli W]
 gi|315061172|gb|ADT75499.1| aspartyl-tRNA synthetase [Escherichia coli W]
 gi|323378251|gb|ADX50519.1| aspartyl-tRNA synthetase [Escherichia coli KO11]
          Length = 590

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELNAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586


>gi|221200073|ref|ZP_03573116.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221206774|ref|ZP_03579786.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221211255|ref|ZP_03584234.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221168616|gb|EEE01084.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221173429|gb|EEE05864.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221180312|gb|EEE12716.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 600

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/594 (38%), Positives = 336/594 (56%), Gaps = 12/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQVKGLVRNRPEGTVNAGLKSGKIEVLCHELNVLNPSITPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KG   +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGAELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+  +  AI  R   +DGD  FF A D  K  + +  A       
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFF-AADRAKVVNDSLGALRLKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +  G++    ++  W++DFP +E+++E+ +   AH+PFT P+        +D    
Sbjct: 420 SEFGKANGLVEAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLESDPGRC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  +V  + F  + I  E  + +FG L  A Q G PPHG
Sbjct: 479 LAKAYDMVLNGWEIGGGSVRIHREDVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRL 592


>gi|157145355|ref|YP_001452674.1| aspartyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|166225337|sp|A8AFH5|SYD_CITK8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157082560|gb|ABV12238.1| hypothetical protein CKO_01095 [Citrobacter koseri ATCC BAA-895]
          Length = 590

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/592 (38%), Positives = 336/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + +NA++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNVNADMATGEIEVLASDLTIINRADSLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R +++E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWQEVKGVDL--GDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLSRKQIDDYGNFIKIYGAKGLAYIKVT 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIVEAILDRTAAQDGDMIFFGADNKKVVADALGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + +   +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLNLTDEAKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDLTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI+++    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHSGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+ +V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELGIDVVKK 586


>gi|300214568|gb|ADJ78984.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 590

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 222/592 (37%), Positives = 342/592 (57%), Gaps = 18/592 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFE 60
           RT   G +    +   V L GWV + R  G +IF+D+RD  GI Q+V     NP++   +
Sbjct: 3   RTTYAGLVDEKYLDQEVCLKGWVQKRRNLGNLIFIDLRDIEGIVQLVFSQEFNPEA--LK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSE+V+ + G V++R  + IN N+ TG++E+    IEIL+ A+  P  +  +   
Sbjct: 61  VAEQLRSEYVIEVKGKVVARGEKAINPNMRTGKVEVEVSDIEILNKAKTTPFDIADDINA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R +YR+LDLRR  + K ++ R RI  ++   +   +F++  TP LT S+PEGARD+
Sbjct: 121 SDDLRLQYRYLDLRRPEMQKALMIRNRITQTVHSYLDENHFLDIETPYLTRSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  G FYALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R DR P EF Q+D+E
Sbjct: 181 LVPSRVYPGHFYALPQSPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQP-EFTQIDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  ++I    E +L+ V +E  + + +     RI +++A+ R+G+DKPD+R  + + 
Sbjct: 240 TSFMSAEEIQEMTEGLLKRVMKETLDVD-IKTPIQRITWNEAMDRFGSDKPDIRFGMELK 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +++    ++ F+VF   +++  G +V AI   GG    +R   +   E+ +  G  GLA+
Sbjct: 299 DMSSAVQNAGFKVFD--MTLENGGQVKAITVPGGADKYSRKQIEEKQEYIKRFGAKGLAW 356

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  ++ + G     GP+AK       E I+   + + GD   F+A +           R 
Sbjct: 357 V--KVTDDGLT---GPIAKFFT-ERAEDIKAAAEAKSGDLILFVASNRKVVADSLGYLRV 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+E+ +IN + F F W++D+P +E++EE  +   AH+PFTMP      L   D     
Sbjct: 411 AIAKEMDMINKDEFAFIWVVDWPLFEYSEEFDRYIAAHHPFTMPNEEDLDLLETDPHKCH 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G IR H  ++    F  +G  KE  E +FG    A   G PPHGG
Sbjct: 471 AQSYDIVLNGYELGGGSIRIHRRDIQEAMFKALGFIKEKAEEQFGWFMDALDFGFPPHGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           +A G+DR  MLL G  N+REV  FP +    + L  +PSTV+ +QL EL L+
Sbjct: 531 LALGLDRFAMLLAGKDNIREVIAFPKNSKASEPLTHAPSTVAPKQLDELYLK 582


>gi|323499465|ref|ZP_08104436.1| aspartyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323315452|gb|EGA68492.1| aspartyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 592

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 231/596 (38%), Positives = 343/596 (57%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD A  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPDSQVNKDMATGEVEIIAKGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D++  T E ++R +++E  + +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADEVRATTEKMVRDMWQELLDVDL--GDFPVMPFSEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V  I   GG    R   D   E+    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAKLTRKQIDGYGEFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN      I  R   + GD   F A             R  + +
Sbjct: 356 DRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEAMGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +L + + N +   W++DFP +E  ++E  +   H+PFT P G   E LK N   +  +  
Sbjct: 416 DLELTDENAWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVNAEELKAN-PAAANSNA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H +E+    F  +GI  E  + +FG L  A + G PPH G+A 
Sbjct: 474 YDMVLNGYEVGGGSVRIHNAEMQAAVFDILGIDAEEQQLKFGFLLDALKFGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    KK
Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVKVAEKK 589


>gi|293415181|ref|ZP_06657824.1| aspartyl-tRNA synthetase [Escherichia coli B185]
 gi|291432829|gb|EFF05808.1| aspartyl-tRNA synthetase [Escherichia coli B185]
          Length = 590

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIQVVKK 586


>gi|300924955|ref|ZP_07140882.1| aspartyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|301327655|ref|ZP_07220863.1| aspartyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|300418891|gb|EFK02202.1| aspartyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300845803|gb|EFK73563.1| aspartyl-tRNA synthetase [Escherichia coli MS 78-1]
          Length = 590

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKRIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586


>gi|82543705|ref|YP_407652.1| aspartyl-tRNA synthetase [Shigella boydii Sb227]
 gi|157155835|ref|YP_001463169.1| aspartyl-tRNA synthetase [Escherichia coli E24377A]
 gi|170019789|ref|YP_001724743.1| aspartyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|170682211|ref|YP_001743378.1| aspartyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187733090|ref|YP_001879756.1| aspartyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|191168067|ref|ZP_03029866.1| aspartyl-tRNA synthetase [Escherichia coli B7A]
 gi|193066060|ref|ZP_03047117.1| aspartyl-tRNA synthetase [Escherichia coli E22]
 gi|193069878|ref|ZP_03050827.1| aspartyl-tRNA synthetase [Escherichia coli E110019]
 gi|194429644|ref|ZP_03062162.1| aspartyl-tRNA synthetase [Escherichia coli B171]
 gi|194433940|ref|ZP_03066212.1| aspartyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|209919233|ref|YP_002293317.1| aspartyl-tRNA synthetase [Escherichia coli SE11]
 gi|218554454|ref|YP_002387367.1| aspartyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218695432|ref|YP_002403099.1| aspartyl-tRNA synthetase [Escherichia coli 55989]
 gi|218705367|ref|YP_002412886.1| aspartyl-tRNA synthetase [Escherichia coli UMN026]
 gi|256017930|ref|ZP_05431795.1| aspartyl-tRNA synthetase [Shigella sp. D9]
 gi|260844209|ref|YP_003221987.1| aspartyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260855806|ref|YP_003229697.1| aspartyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260868401|ref|YP_003234803.1| aspartyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|293410178|ref|ZP_06653754.1| aspartyl-tRNA synthetase [Escherichia coli B354]
 gi|293446253|ref|ZP_06662675.1| aspartyl-tRNA synthetase [Escherichia coli B088]
 gi|298381003|ref|ZP_06990602.1| aspartyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300816242|ref|ZP_07096464.1| aspartyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300899116|ref|ZP_07117399.1| aspartyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300917557|ref|ZP_07134212.1| aspartyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|301018298|ref|ZP_07182807.1| aspartyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|309794247|ref|ZP_07688671.1| aspartyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|331653275|ref|ZP_08354280.1| aspartate--tRNA ligase [Escherichia coli M718]
 gi|331663363|ref|ZP_08364273.1| aspartate--tRNA ligase [Escherichia coli TA143]
 gi|331668561|ref|ZP_08369409.1| aspartate--tRNA ligase [Escherichia coli TA271]
 gi|331673396|ref|ZP_08374164.1| aspartate--tRNA ligase [Escherichia coli TA280]
 gi|331677747|ref|ZP_08378422.1| aspartate--tRNA ligase [Escherichia coli H591]
 gi|331683372|ref|ZP_08383973.1| aspartate--tRNA ligase [Escherichia coli H299]
 gi|332278964|ref|ZP_08391377.1| aspartyl-tRNA synthetase [Shigella sp. D9]
 gi|97196865|sp|Q322D4|SYD_SHIBS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166979741|sp|A7ZMZ0|SYD_ECO24 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189082097|sp|B1J0M2|SYD_ECOLC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226736538|sp|B7M2F7|SYD_ECO8A RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226736539|sp|B7NBL7|SYD_ECOLU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226736540|sp|B1LD05|SYD_ECOSM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238064707|sp|B6IBU5|SYD_ECOSE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238691719|sp|B2TXL2|SYD_SHIB3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781732|sp|B7L7R9|SYD_ECO55 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|81245116|gb|ABB65824.1| aspartate tRNA synthetase [Shigella boydii Sb227]
 gi|157077865|gb|ABV17573.1| aspartyl-tRNA synthetase [Escherichia coli E24377A]
 gi|169754717|gb|ACA77416.1| aspartyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|170519929|gb|ACB18107.1| aspartyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187430082|gb|ACD09356.1| aspartyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|190901865|gb|EDV61615.1| aspartyl-tRNA synthetase [Escherichia coli B7A]
 gi|192926297|gb|EDV80934.1| aspartyl-tRNA synthetase [Escherichia coli E22]
 gi|192956778|gb|EDV87232.1| aspartyl-tRNA synthetase [Escherichia coli E110019]
 gi|194412286|gb|EDX28590.1| aspartyl-tRNA synthetase [Escherichia coli B171]
 gi|194417812|gb|EDX33909.1| aspartyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|195182928|dbj|BAG66496.1| aspartate tRNA synthetase [Escherichia coli O111:H-]
 gi|209912492|dbj|BAG77566.1| aspartyl-tRNA synthase [Escherichia coli SE11]
 gi|218352164|emb|CAU97903.1| aspartyl-tRNA synthetase [Escherichia coli 55989]
 gi|218361222|emb|CAQ98806.1| aspartyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218432464|emb|CAR13357.1| aspartyl-tRNA synthetase [Escherichia coli UMN026]
 gi|257754455|dbj|BAI25957.1| aspartyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257759356|dbj|BAI30853.1| aspartyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257764757|dbj|BAI36252.1| aspartyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|291323083|gb|EFE62511.1| aspartyl-tRNA synthetase [Escherichia coli B088]
 gi|291470646|gb|EFF13130.1| aspartyl-tRNA synthetase [Escherichia coli B354]
 gi|298278445|gb|EFI19959.1| aspartyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300357273|gb|EFJ73143.1| aspartyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300399734|gb|EFJ83272.1| aspartyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300415211|gb|EFJ98521.1| aspartyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300530932|gb|EFK51994.1| aspartyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|308122152|gb|EFO59414.1| aspartyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|323948248|gb|EGB44236.1| aspartyl-tRNA synthetase [Escherichia coli H120]
 gi|324018009|gb|EGB87228.1| aspartyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|324118926|gb|EGC12815.1| aspartyl-tRNA synthetase [Escherichia coli E1167]
 gi|331049373|gb|EGI21445.1| aspartate--tRNA ligase [Escherichia coli M718]
 gi|331059162|gb|EGI31139.1| aspartate--tRNA ligase [Escherichia coli TA143]
 gi|331063755|gb|EGI35666.1| aspartate--tRNA ligase [Escherichia coli TA271]
 gi|331069594|gb|EGI40981.1| aspartate--tRNA ligase [Escherichia coli TA280]
 gi|331074207|gb|EGI45527.1| aspartate--tRNA ligase [Escherichia coli H591]
 gi|331079587|gb|EGI50784.1| aspartate--tRNA ligase [Escherichia coli H299]
 gi|332095228|gb|EGJ00255.1| aspartyl-tRNA synthetase [Shigella dysenteriae 155-74]
 gi|332101316|gb|EGJ04662.1| aspartyl-tRNA synthetase [Shigella sp. D9]
          Length = 590

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586


>gi|74311804|ref|YP_310223.1| aspartyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|97196882|sp|Q3Z2M4|SYD_SHISS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|73855281|gb|AAZ87988.1| aspartate tRNA synthetase [Shigella sonnei Ss046]
          Length = 590

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTVLAELSIQVVKK 586


>gi|262276116|ref|ZP_06053925.1| aspartyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262219924|gb|EEY71240.1| aspartyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 595

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/596 (38%), Positives = 337/596 (56%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L  +  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD    FE+A 
Sbjct: 2   RTQYCGHLNKALAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDIFEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V  R    IN  + TG++E+ A+ +EI++ A   PLP+   +   E 
Sbjct: 62  QLRNEFCIKVTGEVRLRPDSQINKGMATGEVEVLARGVEIINRAA--PLPLDFNQNNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKHRYLDLRRPEMSDRIKMRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R +++E  N +  +  F  + +++A+RR+G+DKPDLRNP+ M +V 
Sbjct: 239 MSAEQVREVTERMVREMWQELLNVDLGA--FPTMTFEEAMRRFGSDKPDLRNPLEMVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V  I   GG   +R   D   ++    G  GLA++   
Sbjct: 297 DLLKDVEFKVFSGPAN-DPKGRVAVIRVPGGAELSRKQIDEYTKFVGIYGAKGLAWVKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK L      AI  R   + GD   F A             R  +  
Sbjct: 356 DRAAGMEGIQSPVAKFLTEDVVNAILERTGAESGDIILFGADKNNIVTEAMGALRLKLGT 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +LG+ + + +   W++DFP +E  ++E  +   H+PFT P     E LK N   ++ +  
Sbjct: 416 DLGLTDTSKWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLNVSPEELKANP-QNVNSNA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+    F  +GI  E  + +FG L  A + G PPH G+A 
Sbjct: 474 YDMVLNGYEVGGGSVRIHNPEMQTAVFDLLGIDAEEQQVKFGFLLEALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL L I    KK
Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSEANPAALEELALSITAAAKK 589


>gi|268589741|ref|ZP_06123962.1| aspartate--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291314893|gb|EFE55346.1| aspartate--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 589

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/590 (38%), Positives = 334/590 (56%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L ++  G  V LSGWV+R R  GG+IF+D+RD  GI QV  +PD    FE A 
Sbjct: 2   RTNYCGQLNIAHEGQKVTLSGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDRKDIFEKAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R     N ++ TG+IE+ A+++ + + +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQKNKDMATGEIEVFAEELNVFNKSE--PLPLDSNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 RRLKYRYLDLRRPEMSDRLRTRAKITSFVRNFMDKEGFLDVETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++R ++ E    +    NF  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREIMERMIRNLWLEVKGVDL--GNFPIMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VFS   + +P   V A+   GG    R   D   ++    G  GLA++   
Sbjct: 297 DIVKDVEFAVFSGPAN-DPKGRVAALKVPGGAAMTRKQIDEYGQFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L+      +  R    DGD   F AG            R  + +
Sbjct: 356 ERAKGLDGIQSPVAKFLSEDVINQLLDRTGAVDGDILLFGAGAKNVVTDSMGALRLKVGR 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +  + + N ++  W++DFP +E N  E  +   H+PFT P+        +      A  Y
Sbjct: 416 DFELTDLNSWQPLWVIDFPMFEDN-GEGGLTAMHHPFTSPKDFSPEELASKPEEAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H +E+    FS +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHRNEMQQTVFSILGINEEDQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR+VMLL G  N+R+V  FP +     L+  +PS  + + L EL + +V
Sbjct: 535 LDRLVMLLTGTDNIRDVIAFPKTTAAACLMTNAPSHANPDALTELAIAVV 584


>gi|330823547|ref|YP_004386850.1| aspartyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|329308919|gb|AEB83334.1| aspartyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 599

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 223/599 (37%), Positives = 347/599 (57%), Gaps = 16/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD    F++A+
Sbjct: 4   RSHYCGLVTEALMGQTVSLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRPEMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R A T N  + +GQIE+   ++++L+ +   P  +  +    E+
Sbjct: 64  DIRNEFCVRVQGVVRARPAGTTNDKLKSGQIEVLCHELDVLNPSVTPPFQM-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R +DLRR  + +N++ R +    +R  +  E F++  TP+L  S+PEGARD+LVP
Sbjct: 123 TRLTHRVMDLRRPAMQRNLMLRYKTAIQVRNFLDKEGFVDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM +G+DRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    + ++  VF++  + +     F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LNEEEIRAIFQRMIVEVFKQQLDVDL--GEFPTMAYAEAMHRFGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  V A+   GG   +R   D+  E+ +  G  GLA+I   
Sbjct: 300 DVMRDVDFKVFSTPATTKGG-RVVALRVPGGAAISRGEIDQYTEFVKIYGAKGLAWIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416
               G      P+ K+++      I  R   QDGD  FF A D  K  + +  A      
Sbjct: 359 EAAKGRDGLQSPIVKNIHDAAIAEILKRTGAQDGDLVFFGA-DKEKIVNDSIGALRLKVG 417

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +   ++ G+   N +   W++DFP +E +E+E +    H+PFT P+ G E L   D   
Sbjct: 418 HSEFGRQNGLFE-NRWAPLWVVDFPMFEHDEDEDRWVAVHHPFTSPKDGHEDLMDTDPGK 476

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+E+  G +R H ++V  + FS + I  E    +FG L  A Q G PPH
Sbjct: 477 CIAKAYDMVLNGWELGGGSVRIHRADVQSKVFSALKIGPEDARAKFGYLLDALQYGAPPH 536

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A G+DR++ L+ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+  NP
Sbjct: 537 GGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL-RNP 594


>gi|294141125|ref|YP_003557103.1| aspartyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293327594|dbj|BAJ02325.1| aspartyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 595

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 221/602 (36%), Positives = 338/602 (56%), Gaps = 28/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CGD+  S VG  V L GWV+R R  GG++FLD+RD  GI QVV +PD    F++A 
Sbjct: 2   RSQYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVAC 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE+ + I GLV +R    +N  + TG+IE+    + +L+ +  LP+ +   +   E 
Sbjct: 62  SLRSEFCVQIKGLVRARPDSQVNNQMRTGEIEILGTSLTVLNSSAPLPINMDKNQHNTEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + I+ R ++ +++R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAERIIFRAKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +++  E ++R +F+E  N +     F ++ + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MSSAQVMDKTEEMMRSLFKELLNVDL--GEFPKMTFAEAMRRFGSDKPDLRNPLELIDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF    + +P   V  +   GG   +R   D   ++A   G  GLA++   
Sbjct: 299 DLLTDVEFKVFQGP-ATDPEGRVAVLCIPGGAKLSRKQLDEYAKYATIYGAKGLAWMKIN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             + G      PV K L+    + +  R D + GD              F AD  N +++
Sbjct: 358 DLDKGLEGIQSPVLKFLSEDVVKGLLERTDAKSGD-----------LILFGADKANIVSE 406

Query: 423 ELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
            +G +     E            W++DFP +E    +  +   H+PFT P G        
Sbjct: 407 AMGALRIKAGEDFDLLKGDWKPLWVVDFPMFE-RTSDGGLHAMHHPFTAPSGMTPEQLEA 465

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D +S  +  YD+V NG E+  G +R H SE+    F  +GI +E    +FG L  A + G
Sbjct: 466 DPISAISDAYDMVLNGCELGGGSVRIHNSEMQTAVFRILGIEEEEANEKFGFLLEALRYG 525

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPH G+A G+DRI+ML+ G  ++R+V  FP +      L  +P   + EQL ELG+ ++
Sbjct: 526 TPPHAGLAFGLDRIIMLMTGTSSIRDVMAFPKTTTAACPLTNAPGFANPEQLVELGIDVI 585

Query: 593 EN 594
           ++
Sbjct: 586 KS 587


>gi|300935841|ref|ZP_07150799.1| aspartyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300458953|gb|EFK22446.1| aspartyl-tRNA synthetase [Escherichia coli MS 21-1]
          Length = 590

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGLQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586


>gi|168747893|ref|ZP_02772915.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168757900|ref|ZP_02782907.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168770849|ref|ZP_02795856.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168776587|ref|ZP_02801594.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168783166|ref|ZP_02808173.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168789731|ref|ZP_02814738.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168801898|ref|ZP_02826905.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208810475|ref|ZP_03252351.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208816661|ref|ZP_03257781.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208819532|ref|ZP_03259852.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209396974|ref|YP_002270949.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|254793490|ref|YP_003078327.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261227633|ref|ZP_05941914.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258201|ref|ZP_05950734.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291283048|ref|YP_003499866.1| Aspartyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|238064706|sp|B5YR11|SYD_ECO5E RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|187768045|gb|EDU31889.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188017525|gb|EDU55647.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188999463|gb|EDU68449.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189355183|gb|EDU73602.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189360301|gb|EDU78720.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189370643|gb|EDU89059.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189376046|gb|EDU94462.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208724991|gb|EDZ74698.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208731004|gb|EDZ79693.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208739655|gb|EDZ87337.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209158374|gb|ACI35807.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209767418|gb|ACI82021.1| aspartate tRNA synthetase [Escherichia coli]
 gi|209767422|gb|ACI82023.1| aspartate tRNA synthetase [Escherichia coli]
 gi|209767424|gb|ACI82024.1| aspartate tRNA synthetase [Escherichia coli]
 gi|209767426|gb|ACI82025.1| aspartate tRNA synthetase [Escherichia coli]
 gi|254592890|gb|ACT72251.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290762921|gb|ADD56882.1| Aspartyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320641720|gb|EFX11108.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320647080|gb|EFX15913.1| aspartyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320652363|gb|EFX20661.1| aspartyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320658537|gb|EFX26231.1| aspartyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668435|gb|EFX35262.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
          Length = 590

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLRSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIQVVKK 586


>gi|260768190|ref|ZP_05877124.1| aspartyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260616220|gb|EEX41405.1| aspartyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|315179891|gb|ADT86805.1| aspartyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 591

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 233/597 (39%), Positives = 344/597 (57%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD A  FE+A 
Sbjct: 2   RSHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADVFEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R    +N ++ TG+IE+ A+ ++I++ ++ LPL  F ++   E 
Sbjct: 62  QLRNEFCIKLTGEVHARPDSQVNKDMATGEIEVLAKGLQIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVRAVTEKMIREMWLELLNVDL--GDFPVMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  V A+   GG   +R   D    +    G  GLA++   
Sbjct: 297 DLLKEVDFKVFSGPANDEKG-RVAALRVPGGAALSRKQIDEYTAFVAIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK LN     AI  R   Q GD   F A D     S A  A R  + 
Sbjct: 356 DLAAGMEGIQSPVAKFLNETIVSAILERTGAQTGDIILFGA-DKANVVSEALGALRLKVG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +EL I N + +   W++DFP +E +++E  +   H+PFT P     E LK N   ++ + 
Sbjct: 415 KELNITNESTWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNMSPEELKANPEGAL-SN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H + +    F  +GI     + +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHDATMQAAVFDLLGIDAAEQQLKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K
Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALDELAIAVTAAKEK 589


>gi|319761676|ref|YP_004125613.1| aspartyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|317116237|gb|ADU98725.1| aspartyl-tRNA synthetase [Alicycliphilus denitrificans BC]
          Length = 599

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 223/599 (37%), Positives = 347/599 (57%), Gaps = 16/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD    F++A+
Sbjct: 4   RSHYCGLVTEALMGQTVSLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRPEMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R A T N  + +GQIE+   ++++L+ +   P  +  +    E+
Sbjct: 64  DIRNEFCVRVQGVVRARPAGTTNDKLKSGQIEVLCHELDVLNPSVTPPFQM-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R +DLRR  + +N++ R +    +R  +  E F++  TP+L  S+PEGARD+LVP
Sbjct: 123 TRLTHRVMDLRRPAMQRNLMLRYKTAIQVRNFLDKEGFVDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM +G+DRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    + ++  VF++  + +     F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LNEEEIRAIFQRMIVEVFKQQLDVDL--GEFPTMAYAEAMHRFGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  V A+   GG   +R   D+  E+ +  G  GLA+I   
Sbjct: 300 DVMRDVDFKVFSTPATTKGG-RVVALRVPGGAAISRGEIDQYTEFVKIYGAKGLAWIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416
               G      P+ K+++      I  R   QDGD  FF A D  K  + +  A      
Sbjct: 359 EAAKGRDGLQSPIVKNIHDAAIAEILKRTGAQDGDLVFFGA-DKEKIVNDSIGALRLKVG 417

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +   ++ G+   N +   W++DFP +E +E+E +    H+PFT P+ G E L   D   
Sbjct: 418 HSEFGRQNGLFE-NRWAPLWVVDFPMFEHDEDEDRWVAVHHPFTSPKDGHEDLMDTDPGK 476

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+E+  G +R H ++V  + FS + I  E    +FG L  A Q G PPH
Sbjct: 477 CIAKAYDMVLNGWELGGGSVRIHRADVQSKVFSALKIGPEDARAKFGYLLDALQYGAPPH 536

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A G+DR++ L+ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+  NP
Sbjct: 537 GGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL-RNP 594


>gi|254524468|ref|ZP_05136523.1| aspartyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219722059|gb|EED40584.1| aspartyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 583

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 228/590 (38%), Positives = 341/590 (57%), Gaps = 16/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV    D+A  F +A 
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNQGGVCFIDLRDHEGIVQVTVEVDNAEVFAVAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+  E VL ++G+V +R A  +N  + TG++E+ A  I +L+ A   PLP        E 
Sbjct: 62  SLGYEDVLQVEGVVRARHA--VNDKMRTGKVEVIATAITVLNKAA--PLPFHAHENPGEE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +    R +++ ++R  +  + F +  TPILT ++PEGARDFLVP
Sbjct: 118 TRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDEKGFQDIETPILTKATPEGARDFLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLDME +F
Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V + D+ + +EN++R +F+E  +   +  +F R+ + +A+RRYG+DKPDLR  + + +V 
Sbjct: 237 VRERDVQDFVENMIRAIFKEVVDVE-LDASFPRMTWAEAMRRYGSDKPDLRIALELVDVA 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           E    SEF VF+   +   G  V A+   GG   +R   D     A   G  GLAYI  +
Sbjct: 296 ELVKDSEFPVFTGPANDAEG-RVAALRIPGGAALSRKQIDEYAAHAAKYGAKGLAYI--K 352

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + ++G V+   P+ K  +  +  A+   +   +GD  FF AG   K   F    R    +
Sbjct: 353 IADNGEVS--SPIQKFFSEASFAALVAHVGAGNGDIVFFGAGGYNKVSDFMGALRLKAGK 410

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           + G++  + +   W+ DFP +EW+EEE++    H+PFT P    +  L+ N   ++ +  
Sbjct: 411 DFGLV-ADGWAPLWVTDFPMFEWDEEEQRYVALHHPFTAPAVDDIADLRANARTAV-SRG 468

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGGIA 
Sbjct: 469 YDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIAF 528

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIDRI  L+ G +++R+V  FP +    DL+  +PS +   QL E+ +++
Sbjct: 529 GIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIVDTQLAEVHIQV 578


>gi|171920816|ref|ZP_02931993.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|185179069|ref|ZP_02964803.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024310|ref|ZP_02996995.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518649|ref|ZP_03004088.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|188524467|ref|ZP_03004476.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195867682|ref|ZP_03079684.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198273687|ref|ZP_03206222.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554563|ref|YP_002284687.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225550875|ref|ZP_03771824.1| aspartate--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551242|ref|ZP_03772188.1| aspartate--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|171903583|gb|EDT49872.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209066|gb|EDU06109.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188018984|gb|EDU57024.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188997771|gb|EDU66868.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195659659|gb|EDX53039.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195660739|gb|EDX53994.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198249715|gb|EDY74496.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209542064|gb|ACI60293.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225379057|gb|EEH01422.1| aspartate--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225380029|gb|EEH02391.1| aspartate--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 578

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/589 (36%), Positives = 347/589 (58%), Gaps = 19/589 (3%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           CG +G   +   V L+GWV +VR  G ++F+D++D +GI Q+ A      F+    +  E
Sbjct: 5   CGRIGKEHLEKNVILNGWVKKVRKMGNLVFVDLKDRFGIVQIFATKQDEVFDELTQLSRE 64

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ ++GLV+ R +   N  + TG+ E+ AQK+ I S A+  PL +  E +  E IRFKY
Sbjct: 65  DVINVEGLVLLRKSP--NHELKTGEFEVHAQKLLIYSKAKTPPLIIEDETDANEEIRFKY 122

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRRD   +    R+++  + R  + +E FIE  TPIL   +PEGARDF VP+R  +
Sbjct: 123 RYLDLRRDVNLRTFELRSKVYQTFRNYLHSEEFIETETPILAKPTPEGARDFYVPTRTKK 182

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ +KQLLM +GF +YFQIA CFRDED RSDR P EF Q+D+E+SF ++ +
Sbjct: 183 --FYALPQSPQTFKQLLMVAGFQKYFQIAKCFRDEDLRSDRQP-EFTQVDIELSFADELE 239

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +EN+ + VF++  N + ++  F+R+ Y+ AI  YG+DKPDLR  + +  +  +F  
Sbjct: 240 IQTLIENLFKHVFKQTINVD-LTTPFVRMSYEQAINDYGSDKPDLRFDLKLKTLDTYFKT 298

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           S+ ++F K LS N       +P      N+     + ++A+ +G  GLA+I   ++    
Sbjct: 299 SKSQIFQKALSNNQSIRAILVP--NVNLNKKQIQSLEKFAKDKGAKGLAWI--SIENEKV 354

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNHIAQELGII 427
           + G     K  +++     +   D         +  D     S +    R ++A  L + 
Sbjct: 355 IDGSLSSIKEDHVIYQTIFK---DYHLSTGTILLIADEFDIASQSLGLVRVNLASMLNLK 411

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL--LSIKAFQYDLV 485
             N F+F WI+D+P YE+++E ++   AH+PFTMP   +E+L   D+   + K   YD+V
Sbjct: 412 KPNDFKFVWIIDWPLYEYDDENQRFVAAHHPFTMP--TLETLDTFDIDQKNAKGRSYDIV 469

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
            NG+E+  G +R    ++  + F ++ +S E    +FG L  AF+ G+PPH GIA G+DR
Sbjct: 470 LNGYEVGGGSVRIINQQIQRRMFKSINMSDEEANLKFGFLLNAFEYGVPPHCGIALGLDR 529

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           ++M+L+ ++ +R+V  FP + N  D+++ +P++++ E L+ELGL I++N
Sbjct: 530 LIMILINSEYIRDVVAFPKNNNGVDMMLDAPASMNDEDLKELGL-IIKN 577


>gi|163802053|ref|ZP_02195949.1| aspartyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159174194|gb|EDP59002.1| aspartyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 592

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 233/596 (39%), Positives = 340/596 (57%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R     N ++ TG++E+ A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPESQANKDMATGEVEILAKGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +  T E ++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVRATTEKMVREMWQELLNVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V  I   GG    R   D   E+    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN      I  R   + GD   F A             R  + +
Sbjct: 356 DRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +LG+     +   W++DFP +E  ++E  +   H+PFT P G   E LK N   +  +  
Sbjct: 416 DLGLTKEGTWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVSAEELKAN-PAAANSNA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H +E+    F  +GI+ E  + +FG L  A + G PPH G+A 
Sbjct: 474 YDMVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFGFLLDALKFGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K
Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVTVAKEK 589


>gi|312870603|ref|ZP_07730717.1| aspartate--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311093878|gb|EFQ52208.1| aspartate--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 595

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/591 (38%), Positives = 342/591 (57%), Gaps = 16/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT+  GD     VG  V L GWV + R  GG+IF+D+ D  GI Q+V N   +   F++A
Sbjct: 3   RTNYAGDTNEQQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKGNPEVFKVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +VR+++VL + G V  R+ + IN ++ TG++E++   I++L+ +E  P  +    +  E
Sbjct: 63  NAVRNQYVLEVHGKVQLRAEKEINPDMKTGKVEVAVDDIKVLAKSETTPFDITDNVDASE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + KN+  R+++ + +      E F++  TP LT S+PEGARD++V
Sbjct: 123 DLRMKYRYLDLRRPEMMKNLKLRSKVASIVHNYYDGEGFLDVETPDLTRSTPEGARDYIV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLMA+G D+Y+Q+A CFRDED R DR P EF Q+D EMS
Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQP-EFTQIDTEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +DI    E +++ V +E   G  V   F R+ + +A+ +YG+DKPD R  +++H++
Sbjct: 242 FATPEDIQTVTEGLIKRVMKEVK-GIDVKTPFSRMEWQEAMDKYGSDKPDTRFGMLIHDL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++    S+F+VFS  ++ N G+ V AI   GG    +R    +  ++ +  G  GLA++ 
Sbjct: 301 SDIVKDSDFKVFSGTVA-NGGF-VRAICVPGGADKYSRKDISKKEDYIKRYGAKGLAWVK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GPVAK LN    + I   +  +DGD   F+A             R  I
Sbjct: 359 VTADGYN-----GPVAKFLND-KADQINAEMGAKDGDLILFVAASFHVVADSLGYLRRAI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLK-GNDLLSIK 478
           A+EL +I    + + W++++P +E++E   K   AH+PFTM  +  +  L+ G D     
Sbjct: 413 AEELDMIKPGQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAH 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD++ NG EI  G IR H  +V  +    +G +KE  E RFG L +A   GMPP GG
Sbjct: 473 AQSYDIILNGQEIGGGSIRIHDPKVQEKVLKALGYTKERAEARFGFLLKALTMGMPPEGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           +A G+DR VMLL  A N+R+V  FP +    + L  +P  VS +QL +L +
Sbjct: 533 LAFGLDRWVMLLAEADNIRDVIPFPKNSKAVEPLTAAPGKVSQQQLDDLKI 583


>gi|215487079|ref|YP_002329510.1| aspartyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|254781731|sp|B7USP3|SYD_ECO27 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|215265151|emb|CAS09539.1| aspartyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
          Length = 590

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G ++F+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLLFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586


>gi|156973887|ref|YP_001444794.1| aspartyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166225442|sp|A7N1J1|SYD_VIBHB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|156525481|gb|ABU70567.1| hypothetical protein VIBHAR_01597 [Vibrio harveyi ATCC BAA-1116]
          Length = 592

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/595 (38%), Positives = 337/595 (56%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPESQVNKDMATGEVEILAKGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +  T E ++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVRATTEKMVREMWQELLNVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V  I   GG    R   D   E+    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN      I  R   + GD   F A             R  + +
Sbjct: 356 DRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L I     +   W++DFP +E  ++E  +   H+PFT P G        +  +  +  Y
Sbjct: 416 DLDITKEGTWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H +E+    F  +GI+ E  + +FG L  A + G PPH G+A G
Sbjct: 475 DMVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFGFLLDALKFGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K
Sbjct: 535 LDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVTVAKEK 589


>gi|119716625|ref|YP_923590.1| aspartyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|166225368|sp|A1SJB8|SYD_NOCSJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119537286|gb|ABL81903.1| aspartyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 590

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 233/598 (38%), Positives = 339/598 (56%), Gaps = 35/598 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT   G L   +VG  V L+GWV   R HGG+ F+D+R+  G+ QVV   +    ++A  
Sbjct: 3   RTQDAGALRAENVGQTVTLAGWVANRRDHGGVAFIDLREASGVVQVVIRDE----QVAHH 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ L + G V  R     N N+ TG++E+ A ++E+LS A  LP P+    +  E  
Sbjct: 59  LRAEYCLAVTGEVTRRKEGNENPNLATGEVEVVANEVEVLSAAAPLPFPISDHVDVGEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R K+R+LDLRR   +  +  R+++  + R  +   +F+E  TP LT S+PEGARDFLVP+
Sbjct: 119 RLKHRYLDLRRSGPNNALRLRSKVNKAARDVLDRHDFVEIETPTLTRSTPEGARDFLVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 179 RLQPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD+L   E VL  +++    G+ V     R+ Y +++ RYGTDKPDLR    + + T 
Sbjct: 238 EQDDVLAVAEEVLVALWKLV--GHDVPVPLPRMTYAESMERYGTDKPDLRMGQELVDCTA 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F  + FRVF           V A+   GG    R   D   EWA+ +G  GLAY+   +
Sbjct: 296 YFADTPFRVFQADY-------VGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL--V 346

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G +   GPV+K++    +  +      + GD  FF AG P    +    AR  I + 
Sbjct: 347 QDDGEL--TGPVSKNITDGESAGLAEHTGAKPGDCIFFAAGAPKPSRALLGAARLEIGRR 404

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFA---------HNPFTMPQ--GGMESLKG 471
             +I+ + + F W++D P +E   +     D A         H+ FT PQ   G ++  G
Sbjct: 405 CDLIDEDAWSFLWVVDAPLFEPTADATASGDVALGYSAWTAVHHAFTSPQDVDGFDADPG 464

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           + L    A+ YD+VCNG EI  G IR H  +V  + F+ +GI +   + +FG L  AF+ 
Sbjct: 465 SAL----AWAYDIVCNGNEIGGGSIRIHREDVQKRVFAIMGIDEAEAQEKFGFLLEAFKY 520

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           G PPHGGIA G DRIV LL G +++R+V  FP S    D L  +P+ ++ EQ +E G+
Sbjct: 521 GAPPHGGIAFGWDRIVALLAGTESIRDVIAFPKSGGGFDPLTAAPAPITPEQRKEAGV 578


>gi|150024383|ref|YP_001295209.1| aspartyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|166225345|sp|A6GWB6|SYD_FLAPJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|149770924|emb|CAL42389.1| Aspartate--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 583

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 224/594 (37%), Positives = 338/594 (56%), Gaps = 21/594 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60
           YR+H+CG+L  + +   V L+GWV + R  G + ++D+RD YGITQ++   +  D   FE
Sbjct: 2   YRSHNCGELNATHINKEVTLAGWVQKSRDKGFMNWVDLRDRYGITQLMFDESRSDKTVFE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +AK++  E+V+ + G V+ R A+  N NI TG+IE+   ++ IL+ +   P  +  E + 
Sbjct: 62  LAKTLGREFVIQVKGTVIEREAK--NKNISTGEIEILVTQMTILNSSLTPPFTIEDETDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LD+RR+ +  +++ R ++   +R  +   +F E  TP L  S+PEGARDF
Sbjct: 120 GEDIRMKYRYLDIRRNPVKNSLLFRHKVAMEVRKYLSDLDFCEVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DILN  E + R + +E          F R+ Y+ A++ YG DKPD+R  +   
Sbjct: 239 MAFVEQEDILNIFEGLTRHLLKELKGIEV--EKFPRMTYNHAMKTYGNDKPDIRFGMEFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQ--GQPGLA 357
            + E+  H +F VF      N    V AI   G G  +R   D + EW +    G  G+ 
Sbjct: 297 ELNEYAKHKDFPVF------NAAELVVAIAVPGVGEYSRKEIDALIEWVKRPQVGASGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  + +E G       V K  +  +          + GD  F ++G   K  +  +  R
Sbjct: 351 YV--KCNEDGTYK--SSVDKFYDQGDLSHWAKTTGAKAGDMIFVLSGPADKTRAQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A  LG+ N   F   W++DFP  E++EE  +    H+PFT P+     L   D  S+
Sbjct: 407 MELATRLGLRNPAEFAPLWVVDFPLLEFDEESGRYHAMHHPFTSPKPEDMHLLETDPKSV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG EI  G IR H        F  +G ++E  +N+FG L  AFQ G PPHG
Sbjct: 467 RANAYDMVLNGNEIGGGSIRIHDKNTQALMFKYLGFTEEEAKNQFGFLMDAFQFGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR+V +L G + +R+   FP + +  D+++ +PS +   QL+EL +++
Sbjct: 527 GLAFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPSIIDDSQLKELHIQL 580


>gi|299531498|ref|ZP_07044904.1| aspartyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298720461|gb|EFI61412.1| aspartyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 599

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/599 (37%), Positives = 342/599 (57%), Gaps = 16/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD A  F++A+
Sbjct: 2   RSQYCGLVTEAQMGETVTLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRAEMFKVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + G+V +R A T N  + +GQIE+   ++ +L+ +   P  +  +    E+
Sbjct: 62  DVRNEFCVQVKGVVRARPAGTTNDKLKSGQIEVLCHELNVLNASVTPPFQL-DDDNLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N++ R +    +R  +  E FI+  TP+L  S+PEGARD+LVP
Sbjct: 121 VRLTNRVMDLRRPVMQRNMMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 181 SRVHDGEFFALPQSPQLYKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    + +++ VF+  +  N     F  + Y DA  R+G+DKPDLR  +    +T
Sbjct: 240 LNEEEIRAIFQRMIKEVFQ--TQLNVDLGEFPIMTYQDAAFRFGSDKPDLRVKLEFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  V A+   GG   +R   D   E+ +  G  GLA+I   
Sbjct: 298 DIMGDVDFKVFSTPATTKGG-RVVALRVPGGAAISRGEIDGYTEFVKIYGAKGLAWIKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416
               G      P+ K+L+      I  R   QDGD  FF A D  K  + +  A      
Sbjct: 357 EVAKGREGLQSPIVKNLHDAALTEILKRTGAQDGDLIFFGA-DKEKIVNDSIGALRLKVG 415

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +   ++ G+   + +   W++DFP +E +EE  +    H+PFT P+ G E L   D   
Sbjct: 416 HSEFGKKSGLFE-DKWAPLWVVDFPMFEHDEESGRWVAVHHPFTSPKDGHEDLMDTDPGK 474

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+E+  G +R H ++V  + F  + I+ E    +FG L  A Q G PPH
Sbjct: 475 CIAKAYDMVLNGWELGGGSVRIHRADVQAKVFEALNITPEQQRAKFGYLLDALQYGAPPH 534

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A G+DR++ L+ G+ ++R+V  FP +Q   DLL  +PS V  +QLREL +++  NP
Sbjct: 535 GGLAFGLDRLITLMTGSDSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIKL-RNP 592


>gi|325860267|ref|ZP_08173391.1| aspartate--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325482233|gb|EGC85242.1| aspartate--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 585

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 222/597 (37%), Positives = 340/597 (56%), Gaps = 26/597 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT++CG+L +SD G  V L+GWV R R  GG+ FLD+RD YGITQ+V N   D+A    
Sbjct: 2   YRTNTCGELRISDAGKEVTLAGWVQRSRKMGGMTFLDLRDRYGITQLVFNEADDAALCGE 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + + G+V  R +   N+ I TG IE+ A+++ +LS +   P  +    +  
Sbjct: 62  ANKLGREYCIQVKGIVSERQSR--NSKIPTGDIEIIAKELNVLSPSLTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR+ + KN+  R R+   +R  + A+ F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRREAVRKNLELRHRMTILIRNFLDAQQFMEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++N  E + R +F E            ++ + +A++R+G+DKPDLR  +    
Sbjct: 239 SFVDQEDVINLFEEMARHLFREIRGIEL--PKLEQMTWHEAMKRFGSDKPDLRFGMEFVE 296

Query: 302 VTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359
           +      +  F VF +   +        +P       +   +  +   R Q G  GL +I
Sbjct: 297 LMSDLKGTGSFSVFDEAAYIGG----IVVPGCADYSRKQLNELTDFVKRPQIGAHGLVFI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-----PLKFCSFAA 414
            +  D  G V     + K       + ++     +DGD    ++GD      ++ CS   
Sbjct: 353 KYNAD--GTVK--SSIDKFYTPEQLQKVKETTGARDGDLVLILSGDNANKTRIQLCSL-- 406

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L     
Sbjct: 407 --RLEMGSRLGLRDKNVFKCLWIIDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDKHP 464

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YD VCNG E+  G +R H +++  + F  +G + E  E +FG L  AF+ G P
Sbjct: 465 EQVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAP 524

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PH G+A G+DR V +L G  ++R+   FP + +  D+++ +PS +  +QL EL +++
Sbjct: 525 PHAGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDIMLDAPSAIDQKQLDELEIKL 581


>gi|91793242|ref|YP_562893.1| aspartyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123060934|sp|Q12N06|SYD_SHEDO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91715244|gb|ABE55170.1| aspartyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 593

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 224/604 (37%), Positives = 338/604 (55%), Gaps = 29/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S +G  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F++A 
Sbjct: 2   RSHYCGDINRSHLGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLKDVFDVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R E+ + + GLV +R    IN+ + TG+IE+  + + I++ +  LPL +   +   E 
Sbjct: 62  SLRGEFCVQVTGLVRARPDSQINSQMKTGEIEVLGKGLTIINASAPLPLSMDNHQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +++R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAERLIFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  ++++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MTSEEVMVKTEEMMRGLFLELLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DLLKEVEFAVFNGPANDEEGRVAALRIPNGATLSRKQIDDYTKFVGIYGAKGLAWMKIND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PV K L       I  R   Q GD              F AD  N +A+ 
Sbjct: 359 LAAGMEGIQSPVLKFLTESIVNDIISRTGAQTGDIIL-----------FGADKANVVAEA 407

Query: 424 LGIINCNC---FEF-------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGN 472
           +G +       FE         W++DFP +E  +        H+PFT P+G     L+ N
Sbjct: 408 MGALRLKAGEDFELLEGQWRPLWVIDFPMFE--KINGGFHAVHHPFTAPRGVTAAELEAN 465

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
               +    YD+V NG E+  G +R H +E+    F  +GI +E  + +FG L  A + G
Sbjct: 466 PANRVSD-AYDMVLNGCELGGGSVRIHNAEMQSAVFRILGIEEEEAKEKFGFLLEALRYG 524

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPH G+A G+DRI+ML+ GA ++R+V  FP +      L  +P   +  QL ELG+++V
Sbjct: 525 TPPHAGLAFGLDRIIMLMTGATSIRDVMAFPKTTTAACPLTNAPGFANPAQLTELGIKVV 584

Query: 593 ENPK 596
           E  K
Sbjct: 585 EKVK 588


>gi|15831830|ref|NP_310603.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168762340|ref|ZP_02787347.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|217328834|ref|ZP_03444915.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|22257054|sp|Q8XCI7|SYD_ECO57 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|13362044|dbj|BAB35999.1| aspartate tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|189367330|gb|EDU85746.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|209767420|gb|ACI82022.1| aspartate tRNA synthetase [Escherichia coli]
 gi|217318181|gb|EEC26608.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
          Length = 590

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLRSVEFAVFAGPAN-DPKGRVAALCVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIQVVKK 586


>gi|226356065|ref|YP_002785805.1| aspartyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|259511855|sp|C1CV34|SYD_DEIDV RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226318055|gb|ACO46051.1| putative aspartate--tRNA ligase (aspartyl-tRNA synthetase)
           [Deinococcus deserti VCD115]
          Length = 577

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/590 (38%), Positives = 330/590 (55%), Gaps = 20/590 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT   G L  + +   V L GWV+R R  GG+IFL++RD  G+ QV   PDS  F  A  
Sbjct: 3   RTALIGQLSTTHLDQAVTLQGWVNRRRDLGGLIFLELRDRSGLVQVQVEPDSPAFAQADQ 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+V  ++G+  +R              E+ A ++++L+ A+  P  +       E I
Sbjct: 63  LRAEYVAEVEGIYRARPENQRKGG--AADYEVIASRVKVLNTAKTPPFELDKGESVAEDI 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  + ++++ R+R + ++   + +  F++  TP+LT S+PEGARDFLVPS
Sbjct: 121 RLKYRYLDLRRPEMQRHLLLRSRAMAAVTAFLDSSGFVQVETPMLTKSTPEGARDFLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+N G FYALPQ+PQ +KQLLM +G+DRY+Q A CFRDED R+DR P +F QLDMEMSFV
Sbjct: 181 RLNPGEFYALPQSPQLFKQLLMIAGYDRYYQFARCFRDEDLRADRQP-DFTQLDMEMSFV 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD+L   E ++  VF+   + + +   F R+ Y DA+ RYG+DKPDLR    + +VT+
Sbjct: 240 EQDDVLELQEGLMAHVFKATLDVD-LPRPFPRLSYFDAMDRYGSDKPDLRFESALVDVTD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F   EF+ F+   SV    +V A         R   D +   A+  G  GLA+    L 
Sbjct: 299 LFQGGEFKAFAAAQSV----KVLAAAEL----TRKQIDELERVAKQNGAGGLAW----LK 346

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
             G+ +  G ++K +  V  + I+ R  +QDG +  F AGD  K  +     R  +    
Sbjct: 347 RDGD-SFTGGISKFVGSVAPQLIK-RSGVQDGGTLLFAAGDWKKAVTALGAVRLAVRDLF 404

Query: 425 GIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN-DLLSIKAFQY 482
            + +    F   W+ DFP  E++E+     + H+PFT P      L G      I+A  Y
Sbjct: 405 DLTSSGPRFHVSWVTDFPQLEFDEDSGTWTYMHHPFTAPHPDDAELFGTLRQGEIRAQAY 464

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NGFE+  G +R H   V  + F  +G ++     +FG    A + G PPHGGIA G
Sbjct: 465 DLVLNGFEVGGGSVRIHDPAVQTKMFEAIGFTEAQAREKFGFFMDALEYGTPPHGGIAWG 524

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            DR+VM++ GA ++REV  FP +    DL+  +PS V   QL ELG+ ++
Sbjct: 525 FDRLVMVMSGASSIREVIAFPKNNRGADLMAEAPSLVDDAQLAELGVGVL 574


>gi|221068933|ref|ZP_03545038.1| aspartyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220713956|gb|EED69324.1| aspartyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 601

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/599 (37%), Positives = 342/599 (57%), Gaps = 16/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD A  F++A+
Sbjct: 4   RSQYCGLVTEAQMGETVTLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRAEMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + G+V +R A T N  + +GQIE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  DVRNEFCVQVKGVVRARPAGTTNDKLKSGQIEVLCHELNVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N++ R +    +R  +  E FI+  TP+L  S+PEGARD+LVP
Sbjct: 123 VRLTNRVMDLRRPVMQRNMMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGEFFALPQSPQLYKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    + +++ VF+  +  N     F  + Y DA  R+G+DKPDLR  +    +T
Sbjct: 242 LNEEEIRAIFQRMIKEVFQ--TQLNVDLGEFPIMTYQDAAFRFGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  V A+   GG   +R   D   E+ +  G  GLA+I   
Sbjct: 300 DIMGDVDFKVFSTPATTKGG-RVVALRVPGGAAISRGEIDGYTEFVKIYGAKGLAWIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416
               G      P+ K+L+      I  R   QDGD  FF A D  K  + +  A      
Sbjct: 359 EVAKGREGLQSPIVKNLHDAALTEILKRTGAQDGDLIFFGA-DKEKIVNDSIGALRLKVG 417

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +   ++ G+   + +   W++DFP +E +EE  +    H+PFT P+ G E L   D   
Sbjct: 418 HSEFGKKSGLFE-DKWAPLWVVDFPMFEHDEESGRWVAVHHPFTSPKDGHEDLMDTDPGK 476

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+E+  G +R H ++V  + F  + I+ E    +FG L  A Q G PPH
Sbjct: 477 CIAKAYDMVLNGWELGGGSVRIHRADVQAKVFEALNITPEQQRAKFGYLLDALQYGAPPH 536

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A G+DR++ L+ G+ ++R+V  FP +Q   DLL  +PS V  +QLREL +++  NP
Sbjct: 537 GGLAFGLDRLITLMTGSDSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIKL-RNP 594


>gi|283832736|ref|ZP_06352477.1| aspartate--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291072419|gb|EFE10528.1| aspartate--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 590

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/592 (38%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S  G  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHEGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ ++ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASDLTIINRSDSLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRNLWLEVKGVDL--GDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VFS   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLVKGVEFAVFSGPAN-DPKGRVAALRVPGGAALSRKQIDDYGNFIKIYGAKGLAYIKVT 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGITSPVAKFLNAEIVEAILARTGAQDGDMIFFGADNKKVVADAMGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L I + + +   W++DFP +E ++ E  +   H+PFT P+    +          A  Y
Sbjct: 416 DLNITDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPEDAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI+++    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANEAALAELSIQVVKK 586


>gi|264676936|ref|YP_003276842.1| aspartyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262207448|gb|ACY31546.1| aspartyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 601

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/599 (37%), Positives = 342/599 (57%), Gaps = 16/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD A  F++A+
Sbjct: 4   RSQYCGLVTEAQMGETVTLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRAEMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + G+V +R A T N  + +GQIE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  DVRNEFCVQVKGVVRARPAGTTNDKLKSGQIEVLCHELNVLNASVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N++ R +    +R  +  E FI+  TP+L  S+PEGARD+LVP
Sbjct: 123 VRLTNRVMDLRRPVMQRNMMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGEFFALPQSPQLYKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    + +++ VF+  +  N     F  + Y DA  R+G+DKPDLR  +    +T
Sbjct: 242 LNEEEIRAIFQRMIKEVFQ--TQLNVDLGEFPIMTYQDAAFRFGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  V A+   GG   +R   D   E+ +  G  GLA+I   
Sbjct: 300 DIMGDVDFKVFSTPATTKGG-RVVALRVPGGAAISRGEIDGYTEFVKIYGAKGLAWIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------ 416
               G      P+ K+L+      I  R   QDGD  FF A D  K  + +  A      
Sbjct: 359 EVAKGREGLQSPIVKNLHDAAIAEILKRTGAQDGDLIFFGA-DKEKIVNDSIGALRLKVG 417

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +   ++ G+   + +   W++DFP +E +EE  +    H+PFT P+ G E L   D   
Sbjct: 418 HSEFGKKSGLFE-DKWAPLWVVDFPMFEHDEESGRWVAVHHPFTSPKDGHEDLMDTDPGK 476

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+E+  G +R H ++V  + F  + I+ E    +FG L  A Q G PPH
Sbjct: 477 CIAKAYDMVLNGWELGGGSVRIHRADVQAKVFEALNITPEQQRAKFGYLLDALQYGAPPH 536

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A G+DR++ L+ G+ ++R+V  FP +Q   DLL  +PS V  +QLREL +++  NP
Sbjct: 537 GGLAFGLDRLITLMTGSDSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIKL-RNP 594


>gi|254457823|ref|ZP_05071250.1| aspartyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207085216|gb|EDZ62501.1| aspartyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 585

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/600 (38%), Positives = 340/600 (56%), Gaps = 25/600 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H C DL  ++VG  V L+GW +  R HGGIIF+D+RD  G+ Q+  +P+  +   ++A
Sbjct: 2   RSHYCTDLNETNVGQDVVLTGWANNHRDHGGIIFIDLRDKTGLIQLTCDPEDGAQAHKVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL   G V  R     N  + TG IE+   ++ I + +  +P  V G+    E
Sbjct: 62  DGVRDEYVLIAKGKVRLRGEGLTNPKLKTGAIEIIVTELIIENKSAPVPF-VIGDPNVGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+L+LR   +++    R++   + R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 121 ETRLKYRYLELRDPAVYETFRLRSKAAIAARNILDENGFLEVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHNGEFYALPQSPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +Q+D++   E +L  +F+  +    V   F RI Y++A+  YG+DKPDLR  + M +V
Sbjct: 240 FCDQEDVIVVAEKLLTAMFK--ACNINVQAPFNRITYNNAMEWYGSDKPDLRYDLKMVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGLAY 358
            + F   +  +F+ I        + A+  K  G +  F  R      ++ R  G  GL Y
Sbjct: 298 IDIFERCDNEIFTNIAKKPHINRIKAL--KVPGADLVFSKREMKSFEDFVRQFGAHGLGY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
             +++ E G     GP+ K  +  +   +  RL M+ GD  FF AGD      +    R 
Sbjct: 356 --FQMKEDGL---KGPLIKFFSEDDIALLVERLGMEVGDVVFFGAGDKKTVWDYMGRLRI 410

Query: 419 HIA--QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            IA  +++ I++ + FEF W++DFP +E   E+ ++   H+PFT P+        +D+  
Sbjct: 411 FIAEHEKMNILDRDAFEFVWVVDFPMFEV--EDGRVKALHHPFTQPK----DTDKDDVEE 464

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I++  YD+V NG E+  G IR H   V  + F  +GI +E  + +FG L  A + G PPH
Sbjct: 465 IESIAYDIVLNGTELGGGSIRIHKEAVQNEVFKLLGIEEEEAQEKFGFLLDALKFGAPPH 524

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG A G DR++ML+    ++R+V  FP +Q    +L  +PS V   QLR+L +R+ E  K
Sbjct: 525 GGFALGFDRMMMLITKKSSIRDVIAFPKTQKASCILTKAPSAVDNTQLRDLHIRLREQVK 584


>gi|260655466|ref|ZP_05860954.1| aspartate--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260629914|gb|EEX48108.1| aspartate--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 602

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 225/602 (37%), Positives = 344/602 (57%), Gaps = 24/602 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEI 61
           RT  CG +    VGS V L+GWV + R  GG++F+D+ DH G+ Q V NP+    +  + 
Sbjct: 15  RTVYCGRVTEGQVGSRVVLNGWVRKRRDLGGVVFIDLWDHTGLVQTVFNPEQCPESVHKA 74

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-Y 120
           A  +RSE+ + + G V  R   T N ++ TG+ E+ A  + +L+ ++ LP  +  E +  
Sbjct: 75  AGDLRSEYCVAVTGTVRVRPQGTENESLPTGKWEVMADNLLVLAPSKGLPFEIGDETDDV 134

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR   R+LDLRRD +   +  R    +  R  + +  F+E  TP L  S+PEGARD+
Sbjct: 135 DENIRLASRYLDLRRDKMQHFLRTRAAAAHFTRNYLESHGFLEVETPTLVKSTPEGARDY 194

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+  G+FYALPQ+PQ +KQLLM SG DRY+Q+A C+RDED R+DR P EF Q+D+E
Sbjct: 195 LVPSRLVPGNFYALPQSPQIFKQLLMVSGVDRYYQLARCYRDEDLRADRQP-EFTQVDLE 253

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+ ++DI + +E  + G+++E   G  V     RI + +A+ R+G+DKPD+R P  + 
Sbjct: 254 MSFLTEEDIYSLLEGYVNGLWKEIL-GVDVPIPLKRITWHEAMNRFGSDKPDMRIPFELQ 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           ++ E F  + F +F  I  ++ G  + AI   GG   +R   D +   A++ G P LA  
Sbjct: 313 DLKEVFEGAGFALFQSI--IDDGGTIKAIALPGGASLSRKGTDDVIAAAKALGAPDLAAF 370

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARN 418
            ++     +    GP+ K L+      +        GD+ F +A    +  C+     R 
Sbjct: 371 QYK-----DAGLKGPLCKFLDEARQAKLLEATKAAKGDAIFLMAHRDWQLVCTVLGQLRL 425

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESLKGNDL 474
            +A+  G++    ++F W+ DFP +EW++E+ +    H+PFTMP+      +E+  G   
Sbjct: 426 DLARAHGLVE-EGWKFLWVTDFPMFEWSKEDNRWCAMHHPFTMPRESDLDKLETAPGE-- 482

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             + A  YD+V NG E+  G IR H S V  + F  +G+++E   +RFG L +A Q G P
Sbjct: 483 --VCARAYDIVLNGVELGGGSIRIHESSVQSRVFKAIGLTEEAASDRFGFLLQALQFGTP 540

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G DR+ MLL G K+VR+V  FP +    DL+  +P TV+  QL ELGL + + 
Sbjct: 541 PHGGLALGFDRVCMLLSGGKSVRDVIAFPKTARAQDLMSHAPDTVADSQLDELGLFVRQK 600

Query: 595 PK 596
            K
Sbjct: 601 TK 602


>gi|307565634|ref|ZP_07628112.1| aspartate--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307345666|gb|EFN91025.1| aspartate--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 585

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 225/593 (37%), Positives = 342/593 (57%), Gaps = 18/593 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACF-EI 61
           YRT +CG+L ++D G  V LSGWV R R  GG+ F+D+RD YGITQ+V N  D+A   E 
Sbjct: 2   YRTKTCGELRLTDTGKEVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEADNADLCEE 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + I G+V  R ++  N  I TG IE+  +++ +LS A   P  +    +  
Sbjct: 62  ANKLGREYCVQIKGIVNERHSK--NNKIDTGDIEIIVKELNVLSPALTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  + KNI  R ++   +R  + +++FIE  TPIL  S+PEGARDF+
Sbjct: 120 DELRMKYRYLDLRRAAVRKNIELRHKMTIMIRNFLDSQDFIEVETPILIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMIAGFDRYFQIAKCFRDEDLRADRQP-EFTQVDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI-IMH 300
           SFV+Q+D++N  E + R +F E            ++ + +A++ +G+DKPDLR  +  + 
Sbjct: 239 SFVDQNDVINMFEEMCRVLFREIRGVELPK--LEQMPWAEAMKCFGSDKPDLRFGMEFVE 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359
            + +     EF VF++   +        +P       +   +  +   R Q G  GL +I
Sbjct: 297 LINDLKGTGEFSVFNEANYIGG----IVVPGCASYSRKQLNELTDFVKRPQIGAQGLVFI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADARN 418
            +  D  G +     + K   +   + ++      DGD    ++GD P K  +     R 
Sbjct: 353 KYNTD--GTIK--SSIDKFYTLDQLQKVKKTTGANDGDLVLILSGDKPNKVRTQLCSLRL 408

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L       ++
Sbjct: 409 EMGDRLGLRDKNVFKCLWIIDFPLFEWSDEEQRLMATHHPFTMPNPEDLPLLEEHPEQVR 468

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD VCNG E+  G IR H +++  + F ++G +KE  E +FG L  AF+ G PPH G
Sbjct: 469 ALAYDFVCNGIEVGGGSIRIHDTQLQERMFKHLGFTKERAEEQFGFLMNAFKYGAPPHAG 528

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR V ++ G  ++R+   FP + +  D+++ +PST+   QL EL +++
Sbjct: 529 LAFGLDRFVSIMAGLDSIRDCIAFPKNNSGRDVMLDAPSTLDKTQLDELQIKL 581


>gi|149191827|ref|ZP_01870064.1| aspartyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148834345|gb|EDL51345.1| aspartyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 592

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/596 (38%), Positives = 336/596 (56%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  +E+A 
Sbjct: 2   RSHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V  R    +N ++ TG++E+ A  +EI++ ++ LPL     +   E 
Sbjct: 62  QLRNEFCIKLTGEVRVRPESQVNKDMATGEVEILATGLEIINRSDVLPLDF--NQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR++DLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    E ++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSADQVREVTEKMVRDMWQELLNVDL--GQFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V  I   GG    R   D   E+    G  GLA++   
Sbjct: 297 DLLKDVEFKVFSGPANDEKG-RVAVIRVPGGASLTRKQIDGYAEYVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            D S  + G+  PVAK LN      I  R + + GD   F A             R  I 
Sbjct: 356 -DRSAGMEGIQSPVAKFLNEEVINGILERTEAESGDIILFGADKANTVAEAMGALRLKIG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L + + + +   W++DFP +E  ++E  +   H+PFT P G        +  +  +  
Sbjct: 415 KDLELTDESKWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGMTAEELKANPAAANSNA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H +E+    F  +GI  E    +FG L  A + G PPH G+A 
Sbjct: 474 YDMVLNGYEVGGGSVRIHNAEMQAAVFEILGIDAEEQREKFGFLLDALKFGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K
Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSAANPAALEELAIAVTAAKEK 589


>gi|78777284|ref|YP_393599.1| aspartyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|97196995|sp|Q30RL7|SYD_SULDN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78497824|gb|ABB44364.1| aspartate--tRNA(Asn) ligase [Sulfurimonas denitrificans DSM 1251]
          Length = 580

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 224/595 (37%), Positives = 338/595 (56%), Gaps = 25/595 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H C +L  +++G  V L+GW +  R HGGIIF+D+RD  G+ Q+  +P+  ++  +IA
Sbjct: 2   RSHYCTELSEANIGQEVVLAGWANSYRDHGGIIFIDLRDKSGLIQLTCDPEDSASSHKIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+R E+VL   G V  R     N  + TG IE+   ++ I + +  +P  V G++   E
Sbjct: 62  SSIRDEFVLVAKGKVRLRGEGLTNPRLKTGAIEIVVSELTIENRSAAVPF-VIGDKNVGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+L+LR  ++++    R++   + R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 121 ETRLKYRYLELRDPSMYETFRLRSKAAIAARNILDENGFLEVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHSGEFYALPQSPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+D++   E +L  +F   + G  +   F RI Y DA+  YG+DKPDLR  + M +V
Sbjct: 240 FCNQEDVMLIAEKLLVSMFG--ACGVEIKPPFNRIAYRDAMEWYGSDKPDLRYDLKMVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR----MNEWARSQGQPGLAY 358
            + F   +  +F+ I        + A+  +  G +  F  R      ++ R  G  GL Y
Sbjct: 298 IDIFERCDNEIFTNIAKQPHKNRIKAL--RVPGADLVFSKREMKTFEDFVRQFGAQGLGY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
             +++ E G     GP+ K  +  +   +  RL M+ GD  FF AGD      +    R 
Sbjct: 356 --FQMKEDGL---KGPLIKFFSDADIALLVDRLGMKVGDVVFFGAGDKKTVWDYMGRLRI 410

Query: 419 HIAQE--LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            IA+   + + + + FEF W++DFP +E   E+ ++   H+PFT P+        +D+  
Sbjct: 411 FIAEHERMNLADKDAFEFVWVVDFPMFEV--EDGRVKALHHPFTQPK----DTDKDDIEE 464

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I +  YD+V NG E+  G IR H  E+  + F  +GI +E  + +FG L  A + G PPH
Sbjct: 465 IDSIAYDIVLNGTELGGGSIRIHKEEMQEEIFKLLGIGEEEAKEKFGFLLDALKFGAPPH 524

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GG A G DR++ML+    ++R+V  FP +Q    +L  +PS V   QLR+L +++
Sbjct: 525 GGFAIGFDRLMMLISKKSSIRDVIAFPKTQKASCILTKAPSEVDATQLRDLHIKL 579


>gi|148543955|ref|YP_001271325.1| aspartyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184153350|ref|YP_001841691.1| aspartyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|227364868|ref|ZP_03848915.1| aspartyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682507|ref|ZP_08162024.1| aspartate--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|166979991|sp|A5VJG4|SYD_LACRD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229559872|sp|B2G6X9|SYD_LACRJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148530989|gb|ABQ82988.1| aspartyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224694|dbj|BAG25211.1| aspartyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227070131|gb|EEI08507.1| aspartyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324978346|gb|EGC15296.1| aspartate--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 600

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/596 (38%), Positives = 343/596 (57%), Gaps = 16/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT+  GD     VG  V L GWV + R  GG+IF+D+ D  GI Q+V N   +   FEIA
Sbjct: 3   RTNYAGDTNEQQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKENPEAFEIA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +VR+++VL + G V  R+ + IN ++ TG++E++  ++++L+ +E  P  +    +  E
Sbjct: 63  NAVRNQYVLEVQGKVQLRAEKEINPDMKTGKVEVAVDEVKVLAKSETTPFDITDGVDASE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + +N+  R+++ + +      E F++  TP LT S+PEGARD++V
Sbjct: 123 DLRMKYRYLDLRRPEMMRNLKLRSKVASIVHNYYDNEGFMDVETPDLTRSTPEGARDYIV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLMA+G D+Y+Q+A CFRDED R DR P EF Q+D EMS
Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQP-EFTQIDTEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +DI    E +++ V +E   G  V   F R+ + +A+ +YG+DKPD R  +++H++
Sbjct: 242 FATPEDIQTVTEGLIKRVMKEIV-GVDVKTPFPRMEWQEAMDKYGSDKPDTRFGMLIHDL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++    S F+VF+   +V  G  V AI   GG    +R    +  E+ +  G  GLA++ 
Sbjct: 301 SDIVKDSSFKVFAN--TVADGNYVRAIRVPGGADKYSRKDISKYEEYIKRFGAKGLAWVK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GPVAK LN      I   +D ++GD   F+AG            R  I
Sbjct: 359 VTADGYN-----GPVAKFLND-QVAQINEEMDAKEGDLILFVAGSFHVVSDSLGYLRRAI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLK-GNDLLSIK 478
           A+EL +I  + + + W++++P +E++E   K   AH+PFTM  +  +  L+ G D     
Sbjct: 413 AEELDMIKPDQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAH 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD++ NG EI  G IR H  ++  +    +G +KE  E RFG L +A   GMPP GG
Sbjct: 473 AQSYDIILNGNEIGGGSIRIHDPKIQEKVLKALGYTKERAEARFGFLLKALTMGMPPEGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL  A ++R+V  FP +    + L  +P  VS +QL +L +   E 
Sbjct: 533 LAFGLDRWVMLLAQADSIRDVIPFPKNSKAVEPLTAAPGKVSEQQLDDLKIEFDEK 588


>gi|163751781|ref|ZP_02158998.1| aspartyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161328345|gb|EDP99505.1| aspartyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 595

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 223/597 (37%), Positives = 336/597 (56%), Gaps = 28/597 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CGD+  S VG  V L GWV+R R  GG++FLD+RD  GI QVV +PD    F++A 
Sbjct: 2   RSQYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIIQVVYDPDLPEVFDVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE+ + I G+V +R    IN  + TG+IE+  +++ IL+ +  LP+ +   +   E 
Sbjct: 62  SLRSEFCVQIKGVVSARPDSQINDKMRTGEIEILGKELTILNSSAPLPINMDKNQHNTEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + I+ R ++ + +R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAERIIFRAKVTSVVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +++  E ++R +F+E  + +     F ++ + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MSSAQVMDKTEEMMRSLFKELLDVDL--GEFPKMTFAEAMRRFGSDKPDLRNPLELIDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF    + +P   V  +   GG   +R   D+  ++A   G  GLA++   
Sbjct: 299 DLLTDVDFKVFQGP-ATDPEGRVAVLCIPGGAKLSRKQLDQYAKYATIYGAKGLAWMKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             + G      PV K LN    +A+  R   + GD              F AD  N +A+
Sbjct: 358 ELDKGLEGIQSPVLKFLNEDVVKALLERTKAKSGD-----------LILFGADKANIVAE 406

Query: 423 ELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
            +G +     E            W++DFP +E    +  +   H+PFT P G        
Sbjct: 407 AMGALRIKAGEDFDLLKGDWKPLWVVDFPMFEPT-SDGGLHAMHHPFTAPSGMTPEQLEA 465

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D  +  +  YD+V NG E+  G +R H SE+    F  +GI +E    +FG L  A + G
Sbjct: 466 DPTAAISDAYDMVLNGCELGGGSVRIHNSEMQTAVFRILGIEEEEANEKFGFLLEALRYG 525

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            PPH G+A G+DRIVML+ GA ++R+V  FP +      L  +P   + EQL ELG+
Sbjct: 526 TPPHAGLAFGLDRIVMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPEQLVELGI 582


>gi|90961830|ref|YP_535746.1| aspartyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|123269933|sp|Q1WTU9|SYD_LACS1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|90821024|gb|ABD99663.1| Aspartyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 590

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 222/592 (37%), Positives = 343/592 (57%), Gaps = 18/592 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFE 60
           RT   G +    +   V L GWV + R  G +IF+D+RD  GI Q+V     NP++   +
Sbjct: 3   RTTYAGLVDEKYLDQEVCLKGWVQKRRNLGNLIFVDLRDIEGIVQLVFSQEFNPEA--LK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSE+V+ + G V++R  + IN N+ TG++E+    IEIL+ A+  P  +  +   
Sbjct: 61  VAEQLRSEYVIEVKGKVVARGEKAINPNMRTGKVEVEVSDIEILNKAKTTPFDIADDINA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R +YR+LDLRR  + K ++ R RI  ++   +   +F++  TP LT S+PEGARD+
Sbjct: 121 SDDLRLQYRYLDLRRPEMQKALMIRNRITQTVHSYLDENHFLDIETPYLTRSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  G FYALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R DR P EF Q+D+E
Sbjct: 181 LVPSRVYPGHFYALPQSPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQP-EFTQIDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  ++I    E +L+ V +E  + + +     RI +++A+ R+G+DKPD+R  + + 
Sbjct: 240 TSFMSAEEIQEMTEGLLKRVMKETLDVD-IKTPIQRITWNEAMDRFGSDKPDIRFGMELK 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +++    ++ F+VF   +++  G +V AI   GG    +R   +   E+ +  G  GLA+
Sbjct: 299 DMSGAVRNAGFKVFD--MTLENGGQVKAITVPGGADKYSRKQIEEKQEYIKRFGAKGLAW 356

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  ++ + G     GP+AK       E I+   + + GD   F+A +           R 
Sbjct: 357 V--KVTDDGLT---GPIAKFFT-ERAEDIKEAAEAKSGDLILFVASNRKVVADSLGYLRV 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+E+ +IN + F F W++D+P +E++EE  +   AH+PFTMP      L   D     
Sbjct: 411 AIAKEMDMINKDEFAFIWVVDWPLFEYSEEFDRYIAAHHPFTMPNEEDLDLLETDPHKCH 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G IR H  ++    F  +G +KE  E +FG    A   G PPHGG
Sbjct: 471 AQSYDIVLNGYELGGGSIRIHRRDIQEAMFKALGFTKEKAEEQFGWFMDALDFGFPPHGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           +A G+DR  MLL G  N+REV  FP +    + L  +PSTV+ +QL EL L+
Sbjct: 531 LALGLDRFAMLLAGKDNIREVIAFPKNSKASEPLTHAPSTVAPKQLDELYLK 582


>gi|255038351|ref|YP_003088972.1| aspartyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254951107|gb|ACT95807.1| aspartyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 589

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 233/605 (38%), Positives = 337/605 (55%), Gaps = 31/605 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH+CG+L +  V   V L GWV RVR  GG+I+LD+RD YGITQ++       +   E 
Sbjct: 3   RTHTCGELSLGHVNQDVVLCGWVQRVRDKGGMIWLDLRDRYGITQLLFEEGKTPANVLET 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+  E+V+   G V+ R A+  N  I TG IE+   ++ IL+ A+  P  +  E +  
Sbjct: 63  ARSLGREFVISAKGAVIERLAK--NDKIATGDIEIRVAELTILNPAKLPPFLIEDETDGG 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR+ + KN+  R ++    R  +   NFIE  TP+L  S+PEGARDF+
Sbjct: 121 DDIRMKYRYLDLRRNVVRKNLQLRHQVARYTRAYLDNLNFIEVETPVLIKSTPEGARDFV 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D EM
Sbjct: 181 VPSRMNPGEFYALPQSPQTFKQLLMVAGFDRYYQIVKCFRDEDLRADRQP-EFTQIDCEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV Q+D+LNT E ++R +F +    +       R+ Y DA+R YG+DKPD R  +    
Sbjct: 240 SFVTQEDVLNTFEGMIRELFSKVKGIDL--PEVPRVTYADAMRLYGSDKPDTRFEM---- 293

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVW-------AIPAKG-GGGNRAFCDRMNEW-ARSQ- 351
               FV  E +   + L+   G+ V+        I A G  G  R   D + +W  R Q 
Sbjct: 294 ---QFV--ELKGDDRDLTSGKGFGVFDDAGLVVGINASGCAGYTRKQVDELTDWIKRPQI 348

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GL Y+ +  D S   +    V K  +    +      D + GD    ++G   K   
Sbjct: 349 GAKGLVYVRYNADGSIKSS----VDKFYSEEELKKWVEAFDAKPGDLLLILSGQGDKTRK 404

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
              + R  I   LG+ N + +   W++DFP  E+ EEE +    H+PFT P+     L  
Sbjct: 405 QLNELRLEIGSRLGLRNPDEYRALWVIDFPLLEFGEEENRWFAMHHPFTSPKPEDVDLLD 464

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            +L  ++A  YD+V NG E+  G +R    E+  + F  +G S E  + +FG L  AF+ 
Sbjct: 465 KNLGQVRANAYDMVINGVEVGGGSVRIFEKELQRKMFEILGFSAEEAQEQFGFLMNAFEF 524

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPH GIA G DR+  +  GA ++R+   FP + +  D+++ SPS +S  QL+EL +++
Sbjct: 525 GAPPHAGIAFGFDRLCSIFGGADSIRDFIAFPKNNSGRDVMIDSPSAISDAQLKELAIKV 584

Query: 592 VENPK 596
            E  +
Sbjct: 585 AETAQ 589


>gi|261343867|ref|ZP_05971512.1| aspartate--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282568254|gb|EFB73789.1| aspartate--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 589

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/591 (38%), Positives = 336/591 (56%), Gaps = 11/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L ++  G  V L GWV+R R  GG+IF+D+RD  GI QV  +P+    FE A 
Sbjct: 2   RTNYCGQLNIAHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPERKDIFEKAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R     N ++ TG+IE+ A+ + + + +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQKNKDMATGEIEVFAEDLFVFNKSE--PLPLDSNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 RRLKYRYLDLRRPDMSERLRTRAKITSFVRNFMDNEGFLDVETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGVDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++R ++ E    +    NF  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MSAEQVREVMERMIRNLWLEVKGVDL--GNFPIMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + EF VFS   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DIVKNVEFAVFSGPAN-DPKGRVAALKVPGGAAMTRKQIDEYGSFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L++   E +  R    DGD   F AG            R  + +
Sbjct: 356 ERAKGLEGIQSPVAKFLSLDVIEQLLERTGAVDGDIILFGAGAKNVVTDSMGALRLKVGR 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +  + N N ++  W++DFP +E N  E  +   H+PFT P+    E L  N   ++ A  
Sbjct: 416 DFELTNLNSWQPLWVIDFPMFEEN-GEGGLTAMHHPFTSPKDLSPEDLAKNPEDAV-ANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+    F  +GI++E    +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHRGEMQQTVFGILGITEEEQREKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+VMLL G  N+R+V  FP +     L+  +PS  + + L EL + +V
Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTNAPSHANPDSLTELAIAVV 584


>gi|158317668|ref|YP_001510176.1| aspartyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158113073|gb|ABW15270.1| aspartyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 619

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 228/590 (38%), Positives = 326/590 (55%), Gaps = 22/590 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH CGDLG+ + G  V + GWV   R HG  ++F+D+RDH G+ Q V +        + 
Sbjct: 16  RTHLCGDLGLGNAGQRVTVCGWVAHRRQHGQSLMFVDLRDHSGLLQCVVDG-------SV 68

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122
             RSE+VL I G V +R   T+N  + TG++EL+   +E+LSVA   P P+    +   E
Sbjct: 69  DARSEYVLRITGTVTARPEGTVNPALATGEVELTDCAVEVLSVAAPPPFPLDDRADSVEE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S R  YR+LDLRRD + +N+  R+ ++ ++R       F+E  TP+L  S+PEGAR+F+V
Sbjct: 129 STRLTYRYLDLRRDRMQRNLRTRSAVLGALRTAFADRGFVEVETPLLMPSTPEGAREFVV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   GSFYALPQ+PQ +KQLLM  G DRYFQ+A C RDED R+DR   EF QLD+EMS
Sbjct: 189 PSRQFPGSFYALPQSPQLFKQLLMVGGMDRYFQLARCLRDEDLRADRQ-YEFTQLDLEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           FV  DDIL+ +   +       + G+  +     R+ + DA+ R+G DKPDLR  + +  
Sbjct: 248 FVGVDDILDVVSAAVLSAAAAAAAGSGRAVPEIERLTWHDAMNRFGVDKPDLRFGMELVE 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T  F  S F+ F+      P  +   +P      NR   D + + A+  G  GL ++  
Sbjct: 308 LTAIFADSGFKAFAGA----PAVKGIRVPGGSATHNRKALDTLTDRAKKLGAKGLVWM-- 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R+  +G +    PVAK L+      I      ++GD    +A +    C      RN + 
Sbjct: 362 RVAAAGGLE--SPVAKFLSPAELTGIVTATAAEEGDLLLLVADEWETTCEVLGQLRNDLG 419

Query: 422 QELGIINCNCFEFCWIMDFP-FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           +           F W++DFP F   +    +    H+PFT P         ++ L++++ 
Sbjct: 420 RPPA--GAGELRFAWVVDFPLFVGVDAATGRPKPGHHPFTRPHPDDVEKMESEPLAVRSL 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+ SG IR H SE+  + F  +GIS E  + RFG     F  G PPHGG A
Sbjct: 478 AYDLVLNGWELGSGSIRIHESELQQRVFGLLGISPEEAKARFGFFLTPFGYGAPPHGGFA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            GIDR+V +L G  N+REV  FP +Q+  D L G+P+T+   QLRELG+R
Sbjct: 538 FGIDRLVAVLAGEDNIREVIAFPKTQSGLDPLTGAPTTIDERQLRELGIR 587


>gi|150005727|ref|YP_001300471.1| aspartyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|166225320|sp|A6L585|SYD_BACV8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|149934151|gb|ABR40849.1| aspartyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
          Length = 587

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/592 (38%), Positives = 347/592 (58%), Gaps = 16/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           +R+H+CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   ++   E 
Sbjct: 2   FRSHTCGELRLSDAGKSVTLAGWVQRARKMGGMTFVDLRDRYGITQLVFNEAVNAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ I G V  RS +  N NI TG+IE+    + +L+ A   P  +    +  
Sbjct: 62  ANHLGREFVIQITGEVNERSNK--NMNIPTGEIEIIVSVLNVLNSAVTPPFTIEDNSDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR K+R+LDLRR+ + KN+  R ++   +R  + ++ F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKFRYLDLRRNCVRKNLELRHKMTMEVRRYLDSKGFLEVETPMLVGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI++T E + + +F+E   G  +S  FLR+ + DAI+ YG+DKPDLR  +    
Sbjct: 239 SFVEQEDIISTFEGMAKHLFKEL-RGVELSEPFLRMTWADAIKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      +  Y +  I A+G     R   D++ E+ +         ++
Sbjct: 298 LMDIMKGHGFSVFD-----DAAY-IGGICAEGAASYTRKQLDQLTEFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  GNV     V K  +    + ++     + GD    ++G D +K      + R  
Sbjct: 352 ARVEADGNVK--SSVDKFYSQEVLQQMKEAFSAKPGDLILILSGPDAMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + ++LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  +++A
Sbjct: 410 VGRQLGLRDKNKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDSQLQAKMFEILGFTPERAQEQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR V L  G  ++R+   FP + +  D+++ +P+ +   QL EL L +
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDQSQLDELNLVV 581


>gi|332638291|ref|ZP_08417154.1| aspartyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 601

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/593 (38%), Positives = 344/593 (58%), Gaps = 18/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+  G +  + +   V L GWV + R  GG+IF+D+RD  GI Q+  + +  +    +A
Sbjct: 3   RTNYAGLIDEAYLDQTVTLQGWVQKRRDLGGLIFVDLRDREGIVQLAFSEEINADALAVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +RSE+V+ I+G+V SR+   +N ++ +G+IE+   K  ILS A+  P  +  +    +
Sbjct: 63  EKMRSEFVIEIEGVVRSRAEGAVNDHLKSGKIEVQVAKATILSEAKTTPFYIEDDINVSD 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + KN+  R++I  +    + A  FI+  TP L  S+PEGARD+LV
Sbjct: 123 ELRLKYRYLDLRRPEMQKNLRIRSKITAATHEFLDANGFIDIETPYLAKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFDRY+Q+A  FRDED R DR P EF QLD+E S
Sbjct: 183 PSRVYPGSFYALPQSPQLFKQLLMGAGFDRYYQVARAFRDEDLRGDRQP-EFTQLDVETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+I+  +   +  + ++  +    +     + Y DA+ R+GTDKPD+R  + + ++
Sbjct: 242 FMTQDEIMALVNEWVAAIMKKTVDVELNTTEIPVLDYADAMARFGTDKPDMRFGMELQDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           ++    SEF VF+   +V  G +V AI   GG  N  R   D+M ++    G  GLA++ 
Sbjct: 302 SDLMADSEFGVFAN--AVKNGGQVKAIVVPGGADNYSRKDIDKMAQYIERFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
            ++ + G     GP+AK L     +A+  + + Q GD   F A D     S   DA R  
Sbjct: 359 -KITDEGIT---GPIAKFLT-AKGDALLAQTEAQAGDLILF-AADSANVVSATLDALRRM 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGND-LLSI 477
            A+E+G+I+   + F W++++P +E   EE +   AH+PFTMP +  +  L+  D     
Sbjct: 413 TAKEMGLIDDTKWAFAWVVNWPLFEHQAEEDRWIAAHHPFTMPNEEDLPLLETTDGAHQA 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YDLV NG+E+ SG IR H  ++  +  S +G +KE   + FG L    + G PP G
Sbjct: 473 HAQSYDLVLNGYELGSGSIRIHRMDIQEKMLSALGFTKEAAHDAFGFLLEGMEYGFPPMG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL-RELGL 589
           GIA G+DR+ MLL G  N+REV  FP +    + +  +P+ V+  Q+  +LGL
Sbjct: 533 GIALGLDRLAMLLAGRDNIREVIAFPKNSKATEPMTEAPTPVAQAQIVDDLGL 585


>gi|320539869|ref|ZP_08039528.1| aspartyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030055|gb|EFW12075.1| aspartyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 594

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/595 (38%), Positives = 345/595 (57%), Gaps = 15/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD  A F+ A 
Sbjct: 2   RTEYCGQLDLSHVGQKVTLCGWVNRRRDLGGLIFIDMRDCTGIVQVFFDPDQQAAFDKAY 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN  + TG++E+ A  +E+++ +E  PLP+   +   E 
Sbjct: 62  DLRNEFCIQIVGTVRARPDSQINTEMTTGEVEVFAHALEVINHSE--PLPLDANQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R++I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPDMAGRLKTRSKITSLVRHFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME + R ++ E    +     F  I +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREVMEKLARELWLEVKGVDL--GRFPVITFEEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VFS + + +    V  I   GG    R   D  + +    G  GLA++   
Sbjct: 297 DLVKDVEFNVFS-VPANDAKGRVATICVPGGAQLTRKLIDEYSAFVNIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
            D S  +AG+  P+AK L+     AI  R + Q GD  FF   D +K  + A  A R  +
Sbjct: 356 -DRSAGLAGVQSPIAKFLDADVLAAILARTNAQSGDILFF-GADNIKIVTDALGALRLKL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKA 479
            ++L +   + +   W++DFP +E + E   +   H+PFT P     E+L      +I A
Sbjct: 414 GRDLALTKLDSWAPLWVVDFPMFEEDGEGGLVAM-HHPFTAPCNMAPEALASMPTNAI-A 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H  E+    FS +GI++     +FG L  A + G P H G+
Sbjct: 472 NAYDMVINGYEVGGGSVRIHHGEMQQTVFSILGINEHEQREKFGFLLDALKYGTPLHAGM 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +++ 
Sbjct: 532 AFGLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPAALQELAINVLKK 586


>gi|212693293|ref|ZP_03301421.1| hypothetical protein BACDOR_02804 [Bacteroides dorei DSM 17855]
 gi|237710036|ref|ZP_04540517.1| aspartyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|237725303|ref|ZP_04555784.1| aspartyl-tRNA synthetase [Bacteroides sp. D4]
 gi|265753684|ref|ZP_06089039.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212664171|gb|EEB24743.1| hypothetical protein BACDOR_02804 [Bacteroides dorei DSM 17855]
 gi|229435990|gb|EEO46067.1| aspartyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|229456129|gb|EEO61850.1| aspartyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263235398|gb|EEZ20922.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 587

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/590 (38%), Positives = 347/590 (58%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           +R+H+CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   ++   E 
Sbjct: 2   FRSHTCGELRLSDAGKSVTLAGWVQRARKMGGMTFVDLRDRYGITQLVFNEAVNAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ I G V  RS +  N NI TG+IE+   ++ +L+ A   P  +    +  
Sbjct: 62  ANHLGREFVIQITGEVNERSNK--NMNIPTGEIEIIVSELNVLNSAVTPPFTIEDNSDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR K+R+LDLRR+ + KN+  R R+   +R  + ++ F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKFRYLDLRRNCVRKNLELRHRMTMEVRRYLDSKGFLEVETPMLVGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI++T E + + +F+E   G  +S  FLR+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQEDIISTFEGMAKHLFKEL-RGVELSEPFLRMTWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      +  Y +  I A+G     R   D++ E+ +         ++
Sbjct: 298 LMDIMKGHGFSVFD-----DAAY-IGGICAEGAASYTRKQLDQLTEFVKRPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  GNV     V K  +    + ++     + GD    ++G D +K      + R  
Sbjct: 352 ARVEADGNVK--SSVDKFYSQEVLQQMKEAFGAKPGDLILILSGPDAMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + ++LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  +++A
Sbjct: 410 VGRQLGLRDKNEFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDSQLQAKMFEILGFTPERAQEQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L  G  ++R+   FP + +  D+++ +P+ +   QL EL L
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDQSQLDELNL 579


>gi|300692527|ref|YP_003753522.1| aspartate tRNA synthetase [Ralstonia solanacearum PSI07]
 gi|299079587|emb|CBJ52265.1| aspartate tRNA synthetase [Ralstonia solanacearum PSI07]
          Length = 622

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/599 (38%), Positives = 338/599 (56%), Gaps = 22/599 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V LSGW HR R HGG+IF+D+RD  G+ QVV +PD    F++A+
Sbjct: 19  RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 78

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L + G+V +R   T N N+ +G++E+   ++ +L+ +   P  +  +    E+
Sbjct: 79  GVRNEFCLQVKGVVRARPEGTTNPNLASGKVEVLCHELTVLNASVTPPFQL-DDDNLSET 137

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 138 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDAQGFIDIETPMLTKSTPEGARDYLVP 197

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 198 SRTNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 256

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS----NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           + + +I +  E ++R VF+     NT+S      F  + + +A+ R+G+DKPDLR  +  
Sbjct: 257 LGEQEIRDLFEEMIRTVFK-----NTMSVELDATFPVMEFREAMARFGSDKPDLRVKLEF 311

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358
            ++T      +F+VFS   +   G  V A+   GGG   R   D   ++    G  GLA+
Sbjct: 312 TDLTGVMKDVDFKVFSGPANAEGG-RVVALRVPGGGALTRGDIDAYTKFVEIYGAKGLAW 370

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-- 416
           I       G      P+ K+L+      I  R   QDGD  FF A D  K  + A  A  
Sbjct: 371 IKVNEVAKGRDGLQSPIVKNLHDAAIAEIIKRSGAQDGDILFFGA-DRAKVVNDAMGALR 429

Query: 417 ----RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                +   +  G+   + ++  W++DFP +E++EE+ +    H+PFT P+         
Sbjct: 430 LKVGHSEFGKSTGLFE-DAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLET 488

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D     A  YD+V NG+EI  G +R    EV  + F  + I +E    +FG L  A Q G
Sbjct: 489 DPGKCIAKAYDMVLNGWEIGGGSVRIFQEEVQSKVFRALKIGEEEARAKFGFLLDALQYG 548

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            PPHGGIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+
Sbjct: 549 APPHGGIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL 607


>gi|319937182|ref|ZP_08011589.1| aspartyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807548|gb|EFW04141.1| aspartyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 588

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 218/593 (36%), Positives = 347/593 (58%), Gaps = 16/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G L +S VG  V L GWV + R  G ++F+D+RD YG+TQ++   D +  E  K 
Sbjct: 3   RTHNNGQLRMSHVGDNVELIGWVAKKRNLGALVFIDLRDRYGVTQIIF--DESFEERLKE 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           V++E++L + G V+ RS++  N  + TG IE+ A+  +I++ A+  P+ V  E +  E  
Sbjct: 61  VKNEYILQVKGSVIERSSK--NPKMATGDIEVQAKDFQIINTAKLTPMIVADETDALEET 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR  + +N++ R +I  S+R  +   +FI+  TP L  S+PEGARDFLVPS
Sbjct: 119 RMQYRYLDLRRPMMQENLMTRHKITRSIREYLDNLDFIDIETPYLNRSTPEGARDFLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G FYALPQ+PQ +KQLLM SGF++Y+QIA CFRDED R+DR   EF Q+D+EMSF+
Sbjct: 179 RVHKGEFYALPQSPQLFKQLLMVSGFEKYYQIARCFRDEDLRADR-QIEFTQVDVEMSFL 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             D IL   E ++  V  +   G  +     R+ + +A+ +YG DKPD R  + + N+  
Sbjct: 238 STDRILEIGEGMIAKVMHDVK-GIDIELPLRRLTWHEAMEKYGIDKPDTRFGLELVNLNH 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                +F VF   L  +   +   + A+    +R   D + E A++    GLA++  ++ 
Sbjct: 297 IVADVDFAVFKNALEAHGHVKGINVVAQAQEFSRKKIDNLTEIAKTYKAKGLAWL--KVS 354

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF---CSFAADARNHIA 421
           E+G     GP+AK         +   ++ ++ D   F+ GDP K+   C   A  RN++ 
Sbjct: 355 EAG---VQGPIAKFFTEEQMNTLLTAMNAKENDLLLFV-GDP-KYEVVCDSLAAIRNYLG 409

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL + + + F+F W++DFP +E+++E ++    H+PFT P+         D  +  A  
Sbjct: 410 KELKLYDPSTFDFLWVVDFPMFEYDDETQRYYAKHHPFTRPKDEDIDKLETDPENCLADA 469

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NGFE+  G  R +   +  +AF  +G ++E ++++FG      Q G PPHGG A 
Sbjct: 470 YDIVLNGFELGGGSQRIYEQNLQERAFKALGFTQEQIDSQFGWFVEGLQYGTPPHGGFAL 529

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR+ MLL G  ++R+V  FP + +    +  +P+ V+  QL ELG+ + +N
Sbjct: 530 GLDRVAMLLCGCDSLRDVIAFPKNTSATCPMSKAPTPVAKAQLDELGIGVNKN 582


>gi|288800043|ref|ZP_06405502.1| aspartate--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288333291|gb|EFC71770.1| aspartate--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 588

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/596 (38%), Positives = 351/596 (58%), Gaps = 23/596 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEI 61
           YRT+SCG+L + D G  V L+GWV RVR  GG+ F+D+RD YGITQ+V N  S+    E 
Sbjct: 2   YRTNSCGELRLKDAGKEVTLAGWVQRVRKMGGMTFVDLRDRYGITQLVFNESSSKELTEK 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + I G V  R ++  N NI TG+IE+    + ILS +   P  +    +  
Sbjct: 62  ANKLGREFCIQIVGEVSERQSK--NNNIPTGEIEILVSTLNILSESVTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR+T+ KN+  R ++   +R  +    FIE  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRNTVRKNLELRHKMTILIRNFLDNLQFIEVETPLLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR---NPII 298
           SFV+Q+D+L   E++ R +F+E  N   +     ++ + +A+ +YG+DKPDLR     + 
Sbjct: 239 SFVDQEDVLEVFESMTRHLFKEVLNVE-LPAKLRQMTWHEAMSKYGSDKPDLRFGMEFVE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           +H++ +     EF +F+     N  Y +  I A G    +R   + + ++ + + Q G +
Sbjct: 298 LHDLLKG--TGEFSIFN-----NAEY-IGGICATGCSSYSRKQINELTDFVK-RPQVGAS 348

Query: 358 YIFW-RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAAD 415
            + W +++E G++     + K  +    E +  R+D + GD    + G+ P K  +    
Sbjct: 349 GLIWLKIEEDGSIK--SSIDKFYSADILEQLCERMDAKKGDLVLIMCGEKPNKTRTQLCA 406

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  +A+ LG+ + N +E  WI+DFP +EW++EE+++   H+PFT+P      L      
Sbjct: 407 LRLEMAERLGLRDKNKYECLWIVDFPLFEWSDEEQRLMATHHPFTLPNPDDIPLLDEHPE 466

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            ++A  YD VCNG E+  G +R H   +  + F  +G SKE    +FG L  AF+ G PP
Sbjct: 467 QVRAKAYDFVCNGIEVGGGSMRIHDGALQEKMFQILGFSKEEALAQFGFLINAFKYGAPP 526

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           H GIA G+DR V +     ++R+   FP + +  D+++ +PS ++ +QL EL +++
Sbjct: 527 HAGIAFGLDRFVSIFAQLDSIRDCIAFPKNNSGRDVMLDAPSALADKQLTELQIKV 582


>gi|145590071|ref|YP_001156668.1| aspartyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048477|gb|ABP35104.1| aspartyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 599

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/595 (38%), Positives = 338/595 (56%), Gaps = 14/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H+CG +  S +G  V LSGWV+R R HGG+IF+D+RD  G  QVV +PD    F +A+
Sbjct: 4   RSHTCGQVTDSLIGKEVTLSGWVNRRRDHGGVIFIDLRDREGFVQVVCDPDRPEMFALAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + I GLV +R A T N ++++G++E+    + IL+ +   P  +  E    E+
Sbjct: 64  QVRNEFCIQIKGLVRARPAGTENNDLVSGKVEVLCHGLVILNASITPPFQIDDE-NLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL 181
            R  +R LDLRR  + KN+  R R   +M CR   ++  FI+  TP+LT S+PEGARD+L
Sbjct: 123 TRLTHRVLDLRRPQMQKNL--RLRYNVAMECRRYLDDAGFIDIETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D E 
Sbjct: 181 VPSRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F+ + +I    EN++R +F++  N   + N F  + Y + + R+G+DKPDLR       
Sbjct: 240 AFLSELEIRELFENMIRHIFKKTMNVE-LPNPFPTMPYSEGMARFGSDKPDLRVNFEFTE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F+VFS   + + G  V      G G +R+  D   ++    G  GLA+I  
Sbjct: 299 LTDLMKDVDFKVFSGAANQDGGRVVGLCVPGGAGISRSEIDDYTQFVSIYGAKGLAWIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI- 420
                G      P+ K+L+    E I  R   +DGD  FF A           + R  I 
Sbjct: 359 NSVTEGRNGLQSPIVKNLHDAAIEGILKRTGAKDGDIIFFGADKEKVVNDAIGNLRLRIG 418

Query: 421 ----AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
                +E G+     ++  W++DFP ++++E E +    H+PFT P+        +D   
Sbjct: 419 HSAWGKEHGLFT-EGWKPLWVVDFPMFDYDEGEARWVACHHPFTSPKDEHMQYLESDPGK 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG EI  G +R H   V  Q F  + I  E  + +FG L  A Q G PPH
Sbjct: 478 CLAKAYDMVLNGSEIGGGSVRIHQEVVQSQVFRALKIGAEEAQAKFGFLLDALQYGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GGIA G+DRIV ++ GA+++R+V  FP +Q    LL  +PS+V   QL+EL +R+
Sbjct: 538 GGIAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSSVDERQLKELHIRL 592


>gi|303253275|ref|ZP_07339424.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307248172|ref|ZP_07530200.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|302647957|gb|EFL78164.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306855349|gb|EFM87524.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
          Length = 591

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 227/595 (38%), Positives = 343/595 (57%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S VG  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+IA 
Sbjct: 3   RSHYCGALNRSHVGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKIAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE  + I G V++R    IN  + TG+IE+  + + + + +E LPL  F +    E 
Sbjct: 63  SLRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNVVVYNNSEVLPLD-FNQNNTEEQ 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 122 -RLKYRYLDLRRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHNGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   MEN++ G++      N     F  + + +A++R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAEEVRELMENMIHGLW--LDRLNVDLGKFPIMTWQEAMQRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKIL-SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++   SV+    V  +P  G    R   D   ++    G  GLA+    
Sbjct: 298 DILKDVEFKVFNEPANSVDGRVTVLRVP-NGASLTRKQIDEYTQFVGIYGAKGLAWAKIN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN    +A+  R +   GD  FF A             R  + +
Sbjct: 357 NVNAGMEGIQSPVAKFLNEEVFKALIERTNATSGDILFFGADKWQVVTDSMGALRLKVGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +L + + + ++  W++DFP +E  ++E  +   H+PFT P+    E L  N + ++ A  
Sbjct: 417 DLALTDLSAWKPLWVIDFPMFE-KDDEGNLSAMHHPFTSPKNLTPEELAANPVNAV-ANA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  ++    F  +GI+++  + +FG L  A + G PPH G+A 
Sbjct: 475 YDMVINGYEVGGGSVRIYDPKMQQTVFGILGINEQDQQEKFGFLLDALKFGTPPHAGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L ELG+ I++  K
Sbjct: 535 GLDRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELGIAILKKEK 589


>gi|237731903|ref|ZP_04562384.1| aspartyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226907442|gb|EEH93360.1| aspartyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 590

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/592 (38%), Positives = 333/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S  G  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHEGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ ++ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASDLTIINRSDSLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRNLWLEVKGVDL--GDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VFS   +   G  V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLVKDVEFAVFSGPANDAKG-RVAALRVPGGAALSRKQIDDYGNFIKIYGAKGLAYIKVT 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGITSPVAKFLNAEIVEAILARTGAQDGDMIFFGADNKKVVADAMGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L I +   +   W++DFP +E ++ E  +   H+PFT P+    +          A  Y
Sbjct: 416 DLNITDEAKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPKDMTAAELKAAPEDAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI+++    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANAAALAELSIQVVKK 586


>gi|254495274|ref|ZP_05108198.1| aspartyl/glutamyl-tRNA amidotransferase subunit B/aspartyl-tRNA
            synthetase [Polaribacter sp. MED152]
 gi|85819628|gb|EAQ40785.1| aspartyl/glutamyl-tRNA amidotransferase subunit B/aspartyl-tRNA
            synthetase [Polaribacter sp. MED152]
          Length = 1112

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 225/605 (37%), Positives = 341/605 (56%), Gaps = 28/605 (4%)

Query: 4    YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDS--ACFE 60
            YRTH   DL    +   V LSGWV  VR HG +IF+D+RD    + QV  + ++     E
Sbjct: 521  YRTHKISDLSDDSIKIEVTLSGWVSSVRDHGELIFIDLRDSSNQVFQVRLSRETFPNLDE 580

Query: 61   IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            + K ++ E V+ + G+V+ R  +  N+ + TG+IEL    +EIL++++ LP  +    + 
Sbjct: 581  LVK-LKPETVIMVTGVVVQRREDDYNSGLRTGKIELETSALEILNLSKTLPFEIKRAMKT 639

Query: 121  PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
             E+ RF+Y+FLD R D + K IV R R+I  +R  +  E F+E  TPILTA + EGAR+F
Sbjct: 640  NETTRFQYKFLDHRNDEVRKAIVNRHRVIKLLRDILDEEEFLEIETPILTAGTDEGAREF 699

Query: 181  LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +VP+R   GSFY LPQAPQQ+KQ+LM  GF++YFQIA CFRDED R DR P EF QLD+E
Sbjct: 700  IVPTRKQAGSFYTLPQAPQQFKQMLMVGGFEKYFQIARCFRDEDSRGDRQP-EFTQLDIE 758

Query: 241  MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            M++     I++    +   + ++      +   F  I Y +A+ +YG D+PDLR  + M 
Sbjct: 759  MAYASMQQIIDLNTKMFNKIVQKIYGKKWILRPFEVITYKEAMDKYGCDRPDLRYGLEMQ 818

Query: 301  NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR---AFCDRMNEWARSQGQPGLA 357
            ++T+    + F+VFSK +      +   +  +  G  R      + +   A+  G  GLA
Sbjct: 819  DITDIVKDTTFQVFSKPIDDGGIVKCIKVSTEEQGNKRMSKGQIENLTAIAQQNGLGGLA 878

Query: 358  YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
            YI    ++        P+ K L       I    D Q GD  FF A D     + A  A 
Sbjct: 879  YIIVNENDL-----QSPIIKFLGEEIAANIIEATDAQVGDIVFFSAAD----YATANKAL 929

Query: 418  NHIAQELG----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-----QGGMES 468
            + + QE+G    +IN       W++DFP +E   +E +  F HNPF+MP     +  M  
Sbjct: 930  DAVRQEMGRILKLINPKELRPAWVVDFPMFE-KTDEGRWTFTHNPFSMPAVYDLEKHMNG 988

Query: 469  LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
             K +++ +I A QYDL+ NG+EI  G +R H SE++   + N+G +KE +    G +Y+A
Sbjct: 989  -KEDEIGTIIAQQYDLILNGYEIGGGSVRAHKSEILEATYKNMGYNKEEMLKSVGTMYKA 1047

Query: 529  FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
            FQ G PPHGGIA G+DR++M+L    ++REV  FP +    DLL  +PS +S +++ E+ 
Sbjct: 1048 FQYGAPPHGGIAWGVDRLMMILEKKASIREVMAFPKTGTSEDLLFNAPSILSDKKVEEMN 1107

Query: 589  LRIVE 593
            ++I++
Sbjct: 1108 VKIIK 1112


>gi|85059235|ref|YP_454937.1| aspartyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|97196892|sp|Q2NTJ3|SYD_SODGM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|84779755|dbj|BAE74532.1| aspartyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 596

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/598 (37%), Positives = 341/598 (57%), Gaps = 9/598 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F  A 
Sbjct: 2   RTVYCGQLNLSHVGQEVMLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFARAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ L + G+V +R    +N+ + TG +E+ A ++ I++ +E  PLP+   +   E 
Sbjct: 62  ELRNEFCLQLTGIVRARPDSQVNSEMATGAVEVLATELSIINCSE--PLPLDSNQNNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLRR  + + +  R RI + +R  M AE F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKFRYLDLRRPVMAQRLKTRARISSFVRRFMDAEGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E +  +     F ++ Y DA+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTATQVREVMERLIRDLWREITGVDL--GIFPQMTYADAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS I + +    V A+   GG   +R   D   +++   G  GLA++   
Sbjct: 297 DLVKDVQFKVFS-IPANDSQGRVAALRVPGGAQLSRKQIDEYGKYSEIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK L     E I VR    D D  FF A             R  +  
Sbjct: 356 QRAAGVEGVQSPVAKFLGPQVIEQILVRTGAADSDIIFFSADRKNVVTDALGALRLKLGL 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +   + +   W++DFP +E  + E  +   H+PFT P+     +      S  A  Y
Sbjct: 416 DLQLTVTDRWAPLWVVDFPMFE-EDGEGGLAAMHHPFTAPKDVDAQMLAASPTSAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  + I+++  + +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHRGDMQQTVFGILAINEQEQQEKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           +DR+VMLL G  N+R+V  FP +    DL+  +PS  + + L +L + +V   ++ ++
Sbjct: 535 LDRLVMLLTGTDNIRDVIAFPKTTAAADLMTEAPSFGNADALADLSIAVVGKGREAME 592


>gi|313157402|gb|EFR56825.1| aspartate--tRNA ligase [Alistipes sp. HGB5]
          Length = 585

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 228/599 (38%), Positives = 338/599 (56%), Gaps = 20/599 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61
           YRTH+CG L   DV   V L+GWV +VR  G + F+D+RD YGITQ+V    S     E 
Sbjct: 2   YRTHTCGCLRADDVNRTVTLAGWVQKVRNLGAMTFIDLRDRYGITQIVVEEHSPAEARET 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  EWV+ + G V+ RS++  N  + TG IE++A+K+ +L  AE  P  +    +  
Sbjct: 62  ACKLGREWVVQVTGKVVERSSK--NPKMATGDIEVAAEKVVVLHEAEVPPFTIEETSDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  L +N++ R ++   +R  + +E F+E  TP L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRPPLQRNMILRHKMAQEIRRFLDSEGFLEIETPYLVNSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++   FYALPQ+PQ  KQLLM +G+D+YFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMSPNQFYALPQSPQTLKQLLMVAGYDKYFQIVRCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D+L   E   + +F+E  +   ++    R+ + +A+ +YG+DKPDLR  +   +
Sbjct: 239 SFVEQEDVLEIFERWAKHMFKEVMDIE-LTEPLRRMPWIEAMEKYGSDKPDLRFGMEFAD 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQ--GQPGLAY 358
           +T+      F VF     V          A G     R   D + E+ + Q  G  GL +
Sbjct: 298 ITDLAKGHGFSVFDDAEYVT------GFAATGCAVYTRKQIDALTEFVKRQQIGAKGLIW 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  R++ESG  +    + K        A+  R   + GD  F + G   K  +     R 
Sbjct: 352 I--RVEESGVKSS---IDKFYTPDEVRAMADRCGAKAGDMVFILCGKKFKTLTQLCALRL 406

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +AQ+LG+ +   F   WI+DFP +EW++E ++    H+PFT P+        +D   ++
Sbjct: 407 EVAQQLGLRDPKKFAPLWIVDFPLFEWDDETQRYYAMHHPFTSPKLEDVQYIDSDPGRVR 466

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD VCNG EI  G IR H S++  + F  +G + E  + RFG L  AF+ G PPHGG
Sbjct: 467 ANAYDFVCNGTEIGGGSIRIHDSKLQAKMFEVLGFTAEEAQVRFGFLMDAFKFGAPPHGG 526

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G DR+  L  G+ ++R+   FP +    D+++ +P  +   QL EL L +V+  +K
Sbjct: 527 LAFGFDRLCSLFGGSDSIRDYIAFPKNNAGRDVMLDAPGCIDQAQLDELCLSLVKPAEK 585


>gi|312881483|ref|ZP_07741275.1| aspartyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370849|gb|EFP98309.1| aspartyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 592

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 228/596 (38%), Positives = 339/596 (56%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  +EIA 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEIAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ ++ LPL     +   E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPDSQVNQDMATGEVEVIAKGLEIINRSDVLPLDF--NQNNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDLETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D++  T E ++R +++E  + +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSADEVRATTEKMVREMWQELLDVDL--GQFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V  I   GG    R   D   E+    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGASLTRKQIDSYGEFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            D S  + G+  PVAK LN      I  R     GD   F A             R  + 
Sbjct: 356 -DRSAGLEGIQSPVAKFLNEDVINGILDRTQADSGDIILFGADKASVVAEALGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L + + + +   W++DFP +E  ++E  +   H+PFT P G        +  +  +  
Sbjct: 415 KDLELTDESAWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHNAEMQAAVFDILGIDAQEQQLKFGFLLDALKFGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K
Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAASCLLTDAPSVANPAALEELAIAVTVAKEK 589


>gi|319426437|gb|ADV54511.1| aspartyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 592

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/597 (37%), Positives = 340/597 (56%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFAVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G+V +R    +N  + TG+IE+  + + I++ A+ LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGVVRARPDSQVNGQMKTGEIEVLGKALTIINAADPLPLSLDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +++R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSTVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + ++ 
Sbjct: 241 MTSEQVMAKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VFS   +   G   V  IP  G   +R   D   ++    G  GLA++   
Sbjct: 299 DLLKEVEFAVFSAPANDEEGRVAVLRIPG-GAALSRKQIDDYTKFVGIYGAKGLAWMKIN 357

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            D S  + G+  PV K LN      I  R   Q GD   F A             R    
Sbjct: 358 -DLSLGLEGIQSPVLKFLNESIVNEIISRTGAQTGDIILFGADQATVVAESMGALRLKAG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480
           ++  ++    +   W++DFP +E  +        H+PFT P+G   + L+ N    +   
Sbjct: 417 EDFSLLQGE-WRPLWVVDFPMFE--KINGNFHAVHHPFTAPRGVTAAELEANPANRVSD- 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H  E+    F  +GI+ +  + +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDDEAKEKFGFLLEALRYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +VE   K
Sbjct: 533 FGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVEKAVK 589


>gi|146293033|ref|YP_001183457.1| aspartyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166225429|sp|A4Y6S5|SYD_SHEPC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145564723|gb|ABP75658.1| aspartyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 592

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/597 (37%), Positives = 340/597 (56%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFAVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G+V +R    +N  + TG+IE+  + + I++ A+ LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGVVRARPDSQVNGQMKTGEIEVLGKALTIINAADPLPLSLDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +++R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + ++ 
Sbjct: 241 MTSEQVMAKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VFS   +   G   V  IP  G   +R   D   ++    G  GLA++   
Sbjct: 299 DLLKEVEFAVFSAPANDEEGRVAVLRIPG-GAALSRKQIDDYTKFVGIYGAKGLAWMKIN 357

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            D S  + G+  PV K LN      I  R   Q GD   F A             R    
Sbjct: 358 -DLSLGLEGIQSPVLKFLNESIVNEIISRTGAQTGDIILFGADQATVVAESMGALRLKAG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480
           ++  ++    +   W++DFP +E  +        H+PFT P+G   + L+ N    +   
Sbjct: 417 EDFSLLQGE-WRPLWVVDFPMFE--KINGNFHAVHHPFTAPRGVTAAELEANPANRVSD- 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H  E+    F  +GI+ +  + +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDDEAKEKFGFLLEALRYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +VE   K
Sbjct: 533 FGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVEKAVK 589


>gi|327314617|ref|YP_004330054.1| aspartate--tRNA ligase [Prevotella denticola F0289]
 gi|326945678|gb|AEA21563.1| aspartate--tRNA ligase [Prevotella denticola F0289]
          Length = 585

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 221/597 (37%), Positives = 340/597 (56%), Gaps = 26/597 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT++CG+L +SD G  V L+GWV R R  GG+ FLD+RD YGITQ+V N   D+A    
Sbjct: 2   YRTNTCGELRISDAGKEVTLAGWVQRSRKMGGMTFLDLRDRYGITQLVFNEADDAALCGE 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + + G+V  R +   N+ I TG IE+ A+++ +LS +   P  +    +  
Sbjct: 62  ANKLGREYCIQVKGIVSERQSR--NSKIPTGDIEIIAKELNVLSPSLTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR+ + KN+  R R+   +R  + A+ F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRREGVRKNLELRHRMTILIRNFLDAQQFMEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++N  E + R +F E            ++ + +A++R+G+DKPDLR  +    
Sbjct: 239 SFVDQEDVINLFEEMARHLFREIRGVEL--PKLEQMTWHEAMKRFGSDKPDLRFGMEFVE 296

Query: 302 VTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYI 359
           +      +  F VF +   +        +P       +   +  +   R Q G  GL +I
Sbjct: 297 LMSDLKGTGSFSVFDEAAYIGG----IVVPGCADYSRKQLNELTDFVKRPQIGAHGLVFI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-----PLKFCSFAA 414
            +  D  G V     + K       + ++     +DGD    ++GD      ++ CS   
Sbjct: 353 KYNAD--GTVK--SSIDKFYTPEQLQKVKETTGARDGDLVLILSGDNANKTRIQLCSL-- 406

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  +   LG+ + N F+  W++DFP +EW++EE+++   H+PFTMP      L     
Sbjct: 407 --RLEMGSRLGLRDKNVFKCLWVIDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHP 464

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YD VCNG E+  G +R H +++  + F  +G + E  E +FG L  AF+ G P
Sbjct: 465 EQVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAP 524

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PH G+A G+DR V +L G  ++R+   FP + +  D+++ +PS +  +QL EL +++
Sbjct: 525 PHAGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQKQLDELEIKL 581


>gi|309702090|emb|CBJ01404.1| aspartyl-tRNA synthetase [Escherichia coli ETEC H10407]
          Length = 590

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/592 (38%), Positives = 334/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSRVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    E I  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEDILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586


>gi|149369610|ref|ZP_01889462.1| aspartyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149357037|gb|EDM45592.1| aspartyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 586

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/605 (37%), Positives = 341/605 (56%), Gaps = 33/605 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           YRTH+ G+L  S+ G  V L+GWV + R  G I+++D+RD YGITQ+V + +       E
Sbjct: 2   YRTHNNGELRASNAGQEVTLAGWVQKSRDKGFIVWVDLRDRYGITQLVFDEERTPKEMME 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V+ R  E+ N  + TG IE+  +++ +L+ +   P  +  + + 
Sbjct: 62  KASKLGREFVIQVTGEVIER--ESKNPKMPTGDIEILVKEVTVLNESLTPPFTIEDDTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR+ + +N++ R ++  ++R  +  E F++  TP L  S+PEGARDF
Sbjct: 120 GEDLRMKYRYLDIRRNPVRENLIFRHKVSMAVRNYLSNEGFVDVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQ+DILN  E + R + +E  NG  +  +F R+ YDDA+R YG DKPD+R  +   
Sbjct: 239 MAFIEQEDILNMFEGLTRHLLKEI-NGVEIG-DFPRMQYDDAMRLYGNDKPDIRFDMKFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
            + E   H +F VF      N    V  I   GG    R   D + +W +      +  I
Sbjct: 297 ELNEVTQHKDFGVF------NSAELVVGIAVPGGNKYTRKEIDNIIKWVKRPQVGAMGMI 350

Query: 360 FWRLDESGNVAG-------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
           + R ++ G+             +AK   +   +A         GD    ++G+  K  + 
Sbjct: 351 YSRCNDDGSFKSSVDKFYDQDDLAKWAEVTGAKA---------GDLVCVLSGETNKVRAQ 401

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
            +  R H+A ELG+ +   F   W++DFP  E +EE       H+PFT P+ G   L  +
Sbjct: 402 MSALRMHLATELGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDS 461

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
               +KA  YDLV NG EI  G IR H  E       ++G S+E    +FG L  AF+ G
Sbjct: 462 KPGEVKANAYDLVLNGNEIGGGSIRIHDKETQAIMLKHLGFSEEEARAQFGFLMDAFEYG 521

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG+A G+DR+V +L G + +R+   FP + +  D+++ +P+ +  EQL EL L + 
Sbjct: 522 APPHGGLAFGLDRLVSILGGQETIRDFIAFPKNNSGRDVMIDAPAPLDKEQLDELNLML- 580

Query: 593 ENPKK 597
            +PKK
Sbjct: 581 -SPKK 584


>gi|298252816|ref|ZP_06976610.1| aspartyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297533180|gb|EFH72064.1| aspartyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 585

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/592 (38%), Positives = 337/592 (56%), Gaps = 39/592 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V ++GWV R R HGG+ F+D+RD+ G+ QVV   +    E A+ +RSE+V+ + G 
Sbjct: 6   VGQKVTIAGWVDRRRDHGGVAFVDVRDNTGLVQVVIYDE----ETARPLRSEFVVQVTGE 61

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GEREYP-ESIRFKYR 129
           V  R     N ++ TG+IE+ A+ + IL+ ++ LP  V        E + P E +R KYR
Sbjct: 62  VRLRPDGNENDHLATGKIEIVAETVTILAKSDALPFQVSTALENESENKLPSEDVRLKYR 121

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           +LDLRR ++ +N+  R+ +  + R  +   NF E  TP    S+PEGARDF+VP+R+  G
Sbjct: 122 YLDLRRPSMQRNLKLRSDMAKAARHALEDMNFTEVETPTFIKSTPEGARDFVVPARLVPG 181

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           S+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF QLDMEMSF  Q+D+
Sbjct: 182 SWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQLDMEMSFASQEDV 240

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPIIMHNVTEHFV 307
           +   E V+  +++E   G+ ++    RI + +A+ +YG+DKPDLR  NP+I   +T++F 
Sbjct: 241 MAMAERVIAAIWKE--AGHEITLPLPRITWQEAMDKYGSDKPDLRFGNPLI--ELTDYFK 296

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRLDES 366
           ++ FRVF           V A+  KGG    R   D   +WA+ +G  GLAY+     E 
Sbjct: 297 NTPFRVFQASY-------VGAVLFKGGAATPRRQFDAWQDWAKQRGAKGLAYVV--FGED 347

Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426
           G +   GPVAK+L+      ++  +  +DGD+ FF AG            R  +A   G+
Sbjct: 348 GELK--GPVAKNLSEEERAGLKEAVGAEDGDAVFFAAGSRESSQLLLGAVRVELASRAGL 405

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQGGMESLKGNDLLSI 477
           ++ + F F W++DFP ++  ++    D A         H+PFTMP          D    
Sbjct: 406 LHPDEFAFTWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSADWIDKFDKDPEHA 465

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD+VCNG E+  G +R H  ++  +  + +GI K   + +FG L  AF+ G PPH 
Sbjct: 466 MSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVLGIDKAEADEKFGFLLEAFKYGAPPHA 525

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           GIA G DR   +L GA ++R+V  FP +    D L G+P+ +S EQ  E G+
Sbjct: 526 GIALGWDRTAAILAGASSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAETGV 577


>gi|297243526|ref|ZP_06927458.1| aspartyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296888571|gb|EFH27311.1| aspartyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 585

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/592 (38%), Positives = 337/592 (56%), Gaps = 39/592 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V ++GWV R R HGG+ F+D+RD+ G+ QVV   +    E A+ +RSE+V+ + G 
Sbjct: 6   VGQKVTIAGWVDRRRDHGGVAFVDVRDNTGLVQVVIYDE----ETARPLRSEFVVQVTGE 61

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GEREYP-ESIRFKYR 129
           V  R     N ++ TG+IE+ A+ + IL+ ++ LP  V        E + P E +R KYR
Sbjct: 62  VRLRPDGNENDHLATGKIEIVAETVTILAKSDALPFQVSTALENESENKLPSEDVRLKYR 121

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           +LDLRR ++ +N+  R+ +  + R  +   NF E  TP    S+PEGARDF+VP+R+  G
Sbjct: 122 YLDLRRPSMQRNLKLRSDMAKAARHALEDMNFTEVETPTFIKSTPEGARDFVVPARLVPG 181

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           S+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF QLDMEMSF  Q+D+
Sbjct: 182 SWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQLDMEMSFASQEDV 240

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPIIMHNVTEHFV 307
           +   E V+  +++E   G+ ++    RI + +A+ +YG+DKPDLR  NP+I   +T++F 
Sbjct: 241 MAMAERVIAAIWKE--AGHEIALPLPRITWQEAMDKYGSDKPDLRFGNPLI--ELTDYFK 296

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRLDES 366
           ++ FRVF           V A+  KGG    R   D   +WA+ +G  GLAY+     E 
Sbjct: 297 NTPFRVFQASY-------VGAVLFKGGAATPRRQFDAWQDWAKQRGAKGLAYVV--FGED 347

Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426
           G +   GPVAK+L+      ++  +  +DGD+ FF AG            R  +A   G+
Sbjct: 348 GELK--GPVAKNLSEEERAGLKEAVGAEDGDAVFFAAGSRESSQLLLGAVRVELASRAGL 405

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQGGMESLKGNDLLSI 477
           ++ + F F W++DFP ++  ++    D A         H+PFTMP          D    
Sbjct: 406 LHPDEFAFTWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSADWIDKFDKDPEHA 465

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD+VCNG E+  G +R H  ++  +  + +GI K   + +FG L  AF+ G PPH 
Sbjct: 466 MSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVLGIDKAEADEKFGFLLEAFKYGAPPHA 525

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           GIA G DR   +L GA ++R+V  FP +    D L G+P+ +S EQ  E G+
Sbjct: 526 GIALGWDRTAAILAGASSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAETGV 577


>gi|262394697|ref|YP_003286551.1| aspartyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338291|gb|ACY52086.1| aspartyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 592

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 227/595 (38%), Positives = 337/595 (56%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R     N ++ TG++E+ A  +EI++ ++ LPL  F ++   E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPESQANKDMATGEVEILATGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    EN++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVTENMVRDMWQELLNVDL--GQFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V  I   GG    R   D   E+    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGASLTRKQIDGYGEFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN      I  R   + GD   F A             R  + +
Sbjct: 356 DRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKAGIVAEAMGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + + + +   W++DFP +E  ++E  +   H+PFT P G        +  +  +  Y
Sbjct: 416 DLELTDESAWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H +++    F  +GI+ E  + +FG L  A + G PPH G+A G
Sbjct: 475 DMVLNGYEVGGGSVRIHNADMQEAVFDILGITPEEQQLKFGFLLDALKFGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K
Sbjct: 535 LDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSIANPAALEELAIAVTAAKEK 589


>gi|170726921|ref|YP_001760947.1| aspartyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|238688666|sp|B1KHG7|SYD_SHEWM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169812268|gb|ACA86852.1| aspartyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 595

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 225/603 (37%), Positives = 340/603 (56%), Gaps = 30/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CGD+  S VG  V L GWV+R R  GG++FLD+RD  GI QVV +PD    F++A 
Sbjct: 2   RSQYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+ + + GLV +R    +N ++ TG IE+  + + IL+ +  LP+ +   +   E 
Sbjct: 62  TLRSEFCVQVTGLVRARPDSQVNQDMRTGGIEILGKGLTILNSSAPLPINMDKNQHNTEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   IV R+++ +++R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMADRIVFRSKVTSAVRRFLDDSGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F +  N +     F ++ + +A+RR+G+DKPDLRNP+ + ++ 
Sbjct: 241 MSSEQVMAKTEEMVRGLFNDLLNVDL--GEFPKMTFAEAMRRFGSDKPDLRNPLELIDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   +   G   V +IP  G   +R   D   ++    G  GLA++   
Sbjct: 299 DIVKEVEFAVFNGPANDPEGRVAVLSIPG-GAKLSRKQLDEYAKYVTIYGAKGLAWMKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             + G      PV K L+    +A+  R   Q GD              F AD  N +A+
Sbjct: 358 DLDQGMEGIQSPVLKFLSEDVVKALLDRTGAQTGD-----------LILFGADKANIVAE 406

Query: 423 ELGIINCNCFEF----------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKG 471
            +G +     E            W++DFP +E    +  +   H+PFT P G   E L+ 
Sbjct: 407 AMGALRLKAGEDFDLLQGEWKPLWVVDFPMFE-RTSDGGLHAMHHPFTAPTGISPEQLEA 465

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +   +I    YD+V NG E+  G +R H SE+    F  +GI +E    +FG L  A + 
Sbjct: 466 DPTAAISD-AYDMVLNGCELGGGSVRIHNSEMQSAVFRILGIEEEEANEKFGFLLEALRY 524

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPH G+A G+DRI+ML+ GA ++R+V  FP +      L  +P   +  QL ELG+ +
Sbjct: 525 GTPPHAGLAFGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPAQLIELGIEV 584

Query: 592 VEN 594
           +EN
Sbjct: 585 IEN 587


>gi|91228187|ref|ZP_01262169.1| aspartyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|269967682|ref|ZP_06181732.1| aspartyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|91188176|gb|EAS74477.1| aspartyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|269827769|gb|EEZ82053.1| aspartyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 592

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 227/595 (38%), Positives = 338/595 (56%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R     N ++ TG++E+ A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPESQANKDMATGEVEILAKGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +  T E ++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVRATTEKMVREMWQELLNVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V  I   GG    R   D   E+    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGASLTRKQIDGYGEFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN      I  R   + GD   F A             R  + +
Sbjct: 356 DRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKAGIVAEAMGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + + + +   W++DFP +E  ++E  +   H+PFT P G        +  +  +  Y
Sbjct: 416 DLELTDESAWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H +++    F  +GI+ E  + +FG L  A + G PPH G+A G
Sbjct: 475 DMVLNGYEVGGGSVRIHNADMQEAVFDILGITPEEQQLKFGFLLDALKFGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K
Sbjct: 535 LDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSIANPAALEELAIAVTAAKEK 589


>gi|82776452|ref|YP_402801.1| aspartyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|97196873|sp|Q32H95|SYD_SHIDS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|81240600|gb|ABB61310.1| aspartate tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 590

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 334/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   +   G  V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPANDLKG-RVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586


>gi|317131289|ref|YP_004090603.1| aspartyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469268|gb|ADU25872.1| aspartyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 595

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/594 (38%), Positives = 341/594 (57%), Gaps = 25/594 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  C      D G  V + GW  + R  G ++F+D+RD  GI Q+  +  +  A  E A
Sbjct: 10  RTDYCAAFSEKDAGREVVVCGWAAKRRDLGALLFIDLRDRSGILQLAFDDTTGRAVLEKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VRSE+VL   G +  R  ET N  + TG+IE++  ++ IL+ ++  P  V       E
Sbjct: 70  QTVRSEFVLAAKGTIRLR--ETPNDKLPTGRIEMAVSELRILAKSDTPPFEVAEGGAVKE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++ +YR+LDLRR  +  ++  R RI+ +         FIE  TP L  S+PEGARD+LV
Sbjct: 128 EMQLRYRYLDLRRPEMQNHLFLRHRIVKAAHDYFDRNGFIEIETPNLIKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQ+PQ YKQ+LM SGFDRY QIA CFRDED R+DR P EF Q+D+E+S
Sbjct: 188 PSRLHAGKFYALPQSPQLYKQILMLSGFDRYMQIARCFRDEDLRADRQP-EFTQIDLELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++DI+   E  +R VF+E   G  V   F R+ YD+A+ RYG+DKPD+R  + + ++
Sbjct: 247 FVDEEDIMALNEGYIRHVFKEVL-GKDVQTPFQRLPYDEAMARYGSDKPDVRFGMELRDL 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           +E      F VF   L+   G  V A+ A+GG  N  R   D++  + +  G  GLA++ 
Sbjct: 306 SETVKGCGFGVFEGALA--GGGSVRAVTAEGGADNLSRKDLDKLAAFVKDYGAKGLAWL- 362

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD----GDSCFFIAGDPLKFCSFAADA 416
            +L ++ N A  G       ++   A              D+   +A      C+     
Sbjct: 363 -KLGDTPN-ASFGKFVSEDTLLAVAAAAGAGPGDAVLIVADTNSTVA------CTALGAL 414

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLL 475
           R H+A+  G+I  + F F W+  FP +E++EEE +    H+PFT P +  ++ L+ +D  
Sbjct: 415 RLHLAERFGLIPKDEFAFLWVTHFPLFEYSEEEGRYMAMHHPFTAPTEESLDKLE-SDPG 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           +  A  YD+V NG E+  G IR +   +  + F  +G+S +VV  RFG L  AF+ G PP
Sbjct: 474 TCYARAYDMVLNGVELGGGSIRINDPALQKRMFKALGLSDDVVRQRFGFLTEAFRYGAPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           HGG+A G+DR+VML+LG +++++V  FP  QN  +L+ GSP  V  +QLREL L
Sbjct: 534 HGGMAYGLDRLVMLMLGCESIKQVIAFPKVQNASELMTGSPDLVEEKQLRELHL 587


>gi|323493240|ref|ZP_08098369.1| aspartyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323312506|gb|EGA65641.1| aspartyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 592

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 225/595 (37%), Positives = 339/595 (56%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD A  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPDSQVNKDMATGEVEIIAKGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D++  T E ++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADEVRATTEKMVRDMWQELLNVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V  I   GG    R   D   E+    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGASLTRKQIDGYGEFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK L+      I  R   + GD   F A             R  + +
Sbjct: 356 DRAAGMEGIQSPVAKFLSEEVINGILDRTQAESGDIILFGADKANVVAEAMGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + + + +   W++DFP +E  ++E  +   H+PFT P G        +  +  +  Y
Sbjct: 416 DLELTDESTWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A G
Sbjct: 475 DMVLNGYEVGGGSVRIHNAEMQAAVFDILGIDAQEQQLKFGFLLDALKFGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K
Sbjct: 535 LDRLVMLLCGTENIRDVIAFPKTTAASCLLTDAPSLANPAALEELAIAVTAAKEK 589


>gi|120598881|ref|YP_963455.1| aspartyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|166225431|sp|A1RJQ6|SYD_SHESW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|120558974|gb|ABM24901.1| aspartyl-tRNA synthetase [Shewanella sp. W3-18-1]
          Length = 592

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 221/596 (37%), Positives = 336/596 (56%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFAVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G+V +R    +N  + TG+IE+  + + I++ A+ LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGVVRARPDSQVNGQMKTGEIEVLGKALTIINAADPLPLSLDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +++R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + ++ 
Sbjct: 241 MTSEQVMAKTEEMMRGLFLEMLNVDL--GEFPRMTYNEAMRRFGSDKPDLRNPLELVDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VFS   +   G  V A+   GG   +R   D   ++    G  GLA++   
Sbjct: 299 DLLKEVEFAVFSAPANDEEG-RVAALRIPGGAALSRKQIDDYTKFVGIYGAKGLAWMKIN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PV K LN      I  R   Q GD   F A             R    +
Sbjct: 358 DLNLGLEGIQSPVLKFLNESIVNEIVSRTGAQTGDIILFGADQATVVAESMGALRLKAGE 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +  ++    +   W++DFP +E  +        H+PFT P+G     L+ N    +    
Sbjct: 418 DFSLLQGE-WRPLWVVDFPMFE--KINGNFHAVHHPFTAPRGVTAAELEANPANRVSD-A 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G +R H  E+    F  +GI+ +  + +FG L  A + G PPH G+A 
Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDDEAKEKFGFLLEALRYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +VE   K
Sbjct: 534 GLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVEKAVK 589


>gi|16129819|ref|NP_416380.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89108706|ref|AP_002486.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|157161335|ref|YP_001458653.1| aspartyl-tRNA synthetase [Escherichia coli HS]
 gi|170081522|ref|YP_001730842.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|188492729|ref|ZP_02999999.1| aspartyl-tRNA synthetase [Escherichia coli 53638]
 gi|194439032|ref|ZP_03071115.1| aspartyl-tRNA synthetase [Escherichia coli 101-1]
 gi|238901081|ref|YP_002926877.1| aspartyl-tRNA synthetase [Escherichia coli BW2952]
 gi|253773177|ref|YP_003036008.1| aspartyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254161926|ref|YP_003045034.1| aspartyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256022468|ref|ZP_05436333.1| aspartyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|297521469|ref|ZP_06939855.1| aspartyl-tRNA synthetase [Escherichia coli OP50]
 gi|300824192|ref|ZP_07104310.1| aspartyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300928897|ref|ZP_07144402.1| aspartyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300951488|ref|ZP_07165323.1| aspartyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300956621|ref|ZP_07168900.1| aspartyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|301645618|ref|ZP_07245547.1| aspartyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|135102|sp|P21889|SYD_ECOLI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166979742|sp|A8A166|SYD_ECOHS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229559869|sp|B1XHD4|SYD_ECODH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|259511857|sp|C4ZQF0|SYD_ECOBW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|9256904|pdb|1EQR|A Chain A, Crystal Structure Of Free Aspartyl-Trna Synthetase From
           Escherichia Coli
 gi|9256905|pdb|1EQR|B Chain B, Crystal Structure Of Free Aspartyl-Trna Synthetase From
           Escherichia Coli
 gi|9256906|pdb|1EQR|C Chain C, Crystal Structure Of Free Aspartyl-Trna Synthetase From
           Escherichia Coli
 gi|15988142|pdb|1IL2|A Chain A, Crystal Structure Of The E. Coli Aspartyl-Trna
           Synthetase:yeast Trnaasp:aspartyl-Adenylate Complex
 gi|15988143|pdb|1IL2|B Chain B, Crystal Structure Of The E. Coli Aspartyl-Trna
           Synthetase:yeast Trnaasp:aspartyl-Adenylate Complex
 gi|41015|emb|CAA37856.1| aspartate-tRNA ligase [Escherichia coli K-12]
 gi|1736513|dbj|BAA15677.1| aspartyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|1788173|gb|AAC74936.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|157067015|gb|ABV06270.1| aspartyl-tRNA synthetase [Escherichia coli HS]
 gi|169889357|gb|ACB03064.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|188487928|gb|EDU63031.1| aspartyl-tRNA synthetase [Escherichia coli 53638]
 gi|194421991|gb|EDX37995.1| aspartyl-tRNA synthetase [Escherichia coli 101-1]
 gi|238860028|gb|ACR62026.1| aspartyl-tRNA synthetase [Escherichia coli BW2952]
 gi|242377587|emb|CAQ32342.1| aspartyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253324221|gb|ACT28823.1| aspartyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253973827|gb|ACT39498.1| aspartyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253978021|gb|ACT43691.1| aspartyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|260449011|gb|ACX39433.1| aspartyl-tRNA synthetase [Escherichia coli DH1]
 gi|300316603|gb|EFJ66387.1| aspartyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300449238|gb|EFK12858.1| aspartyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300463125|gb|EFK26618.1| aspartyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300523263|gb|EFK44332.1| aspartyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|301076150|gb|EFK90956.1| aspartyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|315136509|dbj|BAJ43668.1| aspartyl-tRNA synthetase [Escherichia coli DH1]
 gi|323937124|gb|EGB33404.1| aspartyl-tRNA synthetase [Escherichia coli E1520]
 gi|323940466|gb|EGB36657.1| aspartyl-tRNA synthetase [Escherichia coli E482]
 gi|323961921|gb|EGB57520.1| aspartyl-tRNA synthetase [Escherichia coli H489]
 gi|332343592|gb|AEE56926.1| aspartyl-tRNA synthetase AspS [Escherichia coli UMNK88]
          Length = 590

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/592 (38%), Positives = 334/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    E I  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEDILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586


>gi|254506050|ref|ZP_05118194.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219550868|gb|EED27849.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 592

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/595 (37%), Positives = 339/595 (56%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD A  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPDSQVNKDMATGEVEIIAKGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D++  T E ++R +++E  + +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADEVRATTEKMVRDMWQELLSVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V  I   GG    R   D   E+    G  GLA++   
Sbjct: 297 DLVKDVEFKVFSGPANDEKG-RVAVIRVPGGASLTRKQIDGYGEFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK L+      I  R   + GD   F A             R  + +
Sbjct: 356 DRAAGLEGIQSPVAKFLSEEVINGILERTQAESGDIILFGADKANVVAEAMGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + + N +   W++DFP +E  ++E  +   H+PFT P G        +  +  +  Y
Sbjct: 416 DLELTDENAWAPLWVVDFPMFE-EDDEGYLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A G
Sbjct: 475 DMVLNGYEVGGGSVRIHDAEMQAAVFDILGIEADEQQLKFGFLLDALKFGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    KK
Sbjct: 535 LDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVKAAEKK 589


>gi|171464173|ref|YP_001798286.1| aspartyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193711|gb|ACB44672.1| aspartyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 600

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/595 (38%), Positives = 334/595 (56%), Gaps = 14/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H+CG +  S +G  V L+GW++R R HGG+IF+D+RD  G  QVV +PD    F +A+
Sbjct: 4   RSHTCGQVTDSLIGQEVTLAGWINRRRDHGGVIFIDLRDREGFVQVVCDPDRPEMFALAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+ + I GLV +R   T N ++++G++E+    + IL+ +   P  +  E    E+
Sbjct: 64  QVRSEFCIQIKGLVRARPTGTANVDLVSGKVEILCHSLVILNASVTPPFQIDDE-SLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL 181
            R  +R LDLRR  + KN+  R R   +M CR   ++  FI+  TP+LT S+PEGARD+L
Sbjct: 123 TRLTHRILDLRRPQMQKNL--RLRYNVAMECRRYLDDAGFIDIETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D E 
Sbjct: 181 VPSRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F+ + +I +  EN++R +F++  N   + N F  + Y + + R+G+DKPDLR       
Sbjct: 240 AFLSELEIRDLFENMIRHIFKKTINVE-LPNPFPTMPYSEGMARFGSDKPDLRVNFEFTE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F+VFS   +   G  V      G   +R+  D   ++    G  GLA+I  
Sbjct: 299 LTDLMKDVDFKVFSGAANQVGGRVVGLCVPGGAEISRSEIDDYTQFVSIYGAKGLAWIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+ K+L+    E I  R   +DGD  FF A           + R  I 
Sbjct: 359 NSVAEGRNGLQSPIVKNLHDAAIEGILKRTGAKDGDIIFFGADKEKVVNDAIGNLRLRIG 418

Query: 422 Q-----ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           Q     E G+     ++  W++DFP ++++E E +    H+PFT P+         D   
Sbjct: 419 QSAWGKEHGLFT-EGWKPLWVVDFPMFDYDEGEARWVACHHPFTSPKDEHMQYLETDPGK 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG EI  G +R H   V  Q F  + I  E  + +FG L  A Q G PPH
Sbjct: 478 CLAKAYDMVLNGSEIGGGSVRIHQEAVQSQVFRALKIDAEEAQAKFGFLLDALQYGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GGIA G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V   QLREL +R+
Sbjct: 538 GGIAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRL 592


>gi|254882093|ref|ZP_05254803.1| aspartyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294777207|ref|ZP_06742663.1| aspartate--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319640898|ref|ZP_07995608.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|254834886|gb|EET15195.1| aspartyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294448921|gb|EFG17465.1| aspartate--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317387480|gb|EFV68349.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 587

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 228/592 (38%), Positives = 347/592 (58%), Gaps = 16/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           +R+H+CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   ++   E 
Sbjct: 2   FRSHTCGELRLSDAGKSVTLAGWVQRARKMGGMTFVDLRDRYGITQLVFNEAVNAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ I G V  RS +  N NI TG+IE+    + +L+ A   P  +    +  
Sbjct: 62  ANHLGREFVIQITGEVNERSNK--NMNIPTGEIEIIVSVLNVLNSAVTPPFTIEDNSDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR K+R+LDLRR+ + KN+  R ++   +R  + ++ F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKFRYLDLRRNCVRKNLELRHKMTMEVRRYLDSKGFLEVETPMLVGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI++T E + + +F+E   G  +S  FLR+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQEDIISTFEGMAKHLFKEL-RGVELSEPFLRMTWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      +  Y +  I A+G     R   D++ E+ +         ++
Sbjct: 298 LMDIMKGHGFSVFD-----DAAY-IGGICAEGAASYTRKQLDQLTEFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  GNV     V K  +    + ++     + GD    ++G D +K      + R  
Sbjct: 352 ARVEADGNVK--SSVDKFYSQEVLQQMKEAFSAKPGDLILILSGPDAMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + ++LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  +++A
Sbjct: 410 VGRQLGLRDKNKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDSQLQAKMFEILGFTPERAQEQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR V L  G  ++R+   FP + +  D+++ +P+ +   QL EL L +
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDQSQLDELNLVV 581


>gi|294674130|ref|YP_003574746.1| aspartate--tRNA ligase [Prevotella ruminicola 23]
 gi|294473699|gb|ADE83088.1| aspartate--tRNA ligase [Prevotella ruminicola 23]
          Length = 593

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/599 (37%), Positives = 340/599 (56%), Gaps = 30/599 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YR+ +CG+L + D GS V L+GWV R R  GG+ F+D+RD YG+TQ+V N   D+   E 
Sbjct: 2   YRSKTCGELRLQDAGSVVTLAGWVQRSRKMGGMTFVDLRDRYGLTQLVFNEADDAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + I G V  R ++  N  + TG IE+  +++ +LS +   P  +    +  
Sbjct: 62  ANKLGREFCIQIKGEVSERQSK--NPKMPTGDIEILVKELNVLSESLTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  + KN+  R R+   +R  + A+NFIE  TPIL  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRAAVRKNLELRHRMTILIRNFLDAQNFIEVETPILIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D+L   E++ R +F+E       +    R+ +++A+RR+G+DKPDLR  +    
Sbjct: 239 SFVDQEDVLQIFEDLARHLFKEVRGIELPA--LQRMTWNEAMRRFGSDKPDLRFGMEFVE 296

Query: 302 VTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357
           + +    +  F VF      N    +  I   G    +R   D + E+ +    G  GL 
Sbjct: 297 LMDQLKGTGTFPVF------NEATYIGGICVPGCANYSRKQLDELTEFVKRPQVGAKGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-----PLKFCSF 412
           Y+  + +E G V     + K         ++     +DGD    ++GD      ++ C+ 
Sbjct: 351 YV--KFNEDGTVK--SSIDKFYTPEVWAQVKEACGAKDGDLVLILSGDNANKTRVQLCTL 406

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               R  +   LG+ + + F   WI+DFP +EW++EE+++   H+PFTMP      L   
Sbjct: 407 ----RLEMGDRLGLRDKDKFVCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDT 462

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D   ++A  YD VCNG E+  G +R H  ++  + F  +G + E    +FG L  AF+ G
Sbjct: 463 DPAKVRAVAYDFVCNGVEVGGGSLRIHDGKLQEKMFQILGFTPERAMAQFGFLINAFKYG 522

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            PPH G+A G+DR V L+ G  ++R+   FP + +  D+++ +P  +  +QL EL L++
Sbjct: 523 APPHAGLAFGLDRFVSLMAGLDSIRDCIAFPKNNSGRDVMLDAPGELDQKQLDELQLKV 581


>gi|283455705|ref|YP_003360269.1| aspartyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|283102339|gb|ADB09445.1| aspS Aspartyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 586

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/592 (38%), Positives = 340/592 (57%), Gaps = 39/592 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V L+GWV R R HGG+ F+D+RD+ G+ QVV   +    E+A+ +RSE+V+ + G 
Sbjct: 6   VGQKVTLAGWVDRRRDHGGVAFIDLRDNTGLVQVVIYDE----EMARPLRSEFVIRVIGE 61

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GEREYP-ESIRFKYR 129
           V  R     N ++ TG+IE+ A+ IE+L+ ++ LP  V        E + P E +R KYR
Sbjct: 62  VRLRPDGNENDHLATGKIEVVAETIEVLAKSDALPFQVSTALENESENKLPGEDVRLKYR 121

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           +LDLRR ++  N+  R+++  + R  +    F E  TP +  S+PEGARDF+VP+R+  G
Sbjct: 122 YLDLRRPSMQHNLKLRSQMSKAARHALEEMGFEEVETPTMIKSTPEGARDFVVPARLVPG 181

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           S+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF QLDMEM+FV+Q+D+
Sbjct: 182 SWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQLDMEMAFVDQEDV 240

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPIIMHNVTEHFV 307
           +   E V+  +++  S G  +     RI + +A+ +YG+DKPDLR  NP++   +T++F 
Sbjct: 241 MAMAEKVIAAIWK--SAGYEIQLPIQRITWQEAMDKYGSDKPDLRFGNPLV--ELTDYFK 296

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRLDES 366
           ++ FRVF           V A+  KGG    R   D   +WA+ +G  GLAY+ +   E+
Sbjct: 297 NTPFRVFQAPY-------VGAVLFKGGAATPRRQFDAWQDWAKQRGAKGLAYVVFA--EN 347

Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426
           G +   GPVAK+L+      ++  +  +DGD+ FF AG            R  +A   G+
Sbjct: 348 GELK--GPVAKNLSEEERNGLKEAVGAEDGDAVFFAAGRRTSAQELLGAVRVELADRAGL 405

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFA---------HNPFTMPQGGMESLKGNDLLSI 477
           +  + F F W++DFP ++  ++    D A         H+PFTMP          D    
Sbjct: 406 LKPDDFAFTWVVDFPLFKTTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWIDTFDKDPEHA 465

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD+VCNG E+  G +R H  ++  +    +GI+ E   ++FG L  AF+ G PPH 
Sbjct: 466 MSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGITPEEAADKFGFLLEAFKYGAPPHA 525

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           GIA G DR   +L GA ++R+V  FP +    D L G+P+ +S EQ  E G+
Sbjct: 526 GIALGWDRTAAILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAETGV 577


>gi|332288351|ref|YP_004419203.1| aspartyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330431247|gb|AEC16306.1| aspartyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 589

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 228/593 (38%), Positives = 346/593 (58%), Gaps = 13/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           R+H CG L  S +G  V LSGWVHR R  GG+IF+++RD  GI QV  +P +   FE A 
Sbjct: 3   RSHYCGALNRSHIGQEVTLSGWVHRRRDLGGLIFINMRDREGIVQVFIDPKNQQAFEKAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+ + I G V++R    IN N+ TG++E+SA  + I + +E LPL  F +    E 
Sbjct: 63  NLRSEYCIQIKGQVIARPENQINKNMATGEVEVSATDVLIYNASEVLPLD-FNQNNTEEQ 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 122 -RLKYRYLDLRRPEMAQRLKTRAKITSYVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++ E    +     F  + Y +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVRAIMEEMIHGLWLEILGVDL--GKFPIMTYAEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  + AI    G    R   D   ++    G  GLA++   
Sbjct: 298 DLLKEVDFKVFSGPANDAKG-RIAAIRVPNGSHITRKQIDEYTQFVTIYGAKGLAWMKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK L+     A+  RL  Q GD  FF   D  K  + A  A R  + 
Sbjct: 357 DVNAGIDGVQSPIAKFLSAEVVAALLERLQAQSGDIIFF-GADSYKVVTDAMGALRLKLG 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAF 480
           ++ G+   + +   W++DFP +E ++ E  +   H+PFT P     E L+ + + ++ A 
Sbjct: 416 RDCGLTQLDQWAPLWVIDFPMFE-DDGEGGLAAMHHPFTSPAHVTPEELEKSPVDAV-AN 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R    ++    F  +GI+++    +FG L  A + G PPH G+A
Sbjct: 474 AYDMVINGYEVGGGSVRIFDQKMQQTVFRILGINEQEQYEKFGFLLDALKYGTPPHAGLA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR+ MLL G +N+R+V  FP +     L+  +PS  +   L+EL +++V+
Sbjct: 534 FGLDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSVANPAALQELSIQVVK 586


>gi|227484951|ref|ZP_03915267.1| aspartate--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227237106|gb|EEI87121.1| aspartate--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 582

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 216/594 (36%), Positives = 337/594 (56%), Gaps = 16/594 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           M   RTH CG L  SD+G  V L GWV + R  G ++F+D+RD  GI+Q+V  + D   +
Sbjct: 1   MEFKRTHMCGSLRSSDLGKEVVLMGWVAKKRNLGSLVFIDLRDKTGISQIVIRDDDKDNY 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A+ +  E+VL + G V  R  E+ N +I TG IE+ A KI IL  A+  P+ +  + +
Sbjct: 61  EKAREISQEYVLEVKGKVFER--ESKNPDIPTGDIEIIADKINILDKAKTPPIYIKDDDD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E++R KYR+LD+R+ ++ +N+  R+ I+ +MR      +F E  TP LT  +PEGARD
Sbjct: 119 VSENLRLKYRYLDMRKPSVQRNLKLRSDIVRTMREYFYENDFTEVETPFLTKPTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+N G FYALPQ+PQ  KQ+LM    DRYFQ+  CFRDED R++R P EF QLD+
Sbjct: 179 YLVPSRINAGKFYALPQSPQLLKQILMIGSLDRYFQVVKCFRDEDLRANRQP-EFTQLDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF  QDD++   E +L+ +F+ +++ + +     R+ Y +A+  YG+DKPDLR    +
Sbjct: 238 EMSFSNQDDVIAMNEGLLKVLFDTYTDYD-LKLPINRMDYSEAMESYGSDKPDLRYGYKI 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG--GGGNRAFCDRMNEWARSQGQPGLA 357
            +V+E FV SEF+VF+   +   G  V AI   G     +R   D++ ++ +  G  GL+
Sbjct: 297 KDVSEIFVGSEFKVFAD--NTGDGRSVRAINFTGLEDKYSRKQLDKLTDFVKDYGLKGLS 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI +      N      + K L       ++ +LD +DGD  F  A             R
Sbjct: 355 YIKF------NNEMQSSIKKFLTDDVINGLKEKLDAKDGDLIFLAADKDKTVLEGLGALR 408

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IA++  +     +   W+++FP +E++EEE +    H+PFTMP      L       +
Sbjct: 409 VKIAKDNNLYEKE-YALTWVVNFPMFEYSEEEDRYVAQHHPFTMPNEEDIDLLLTQPEKV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +   YD+V NG E+  G +R + S++  + F  + +S E ++ +FG    A Q G PPH 
Sbjct: 468 RTQAYDIVINGDEMGGGSVRINNSDLQKKVFEALKLSDEDIKIKFGFFIEALQYGTPPHA 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR++ML     N++++  FP +Q+    L  +P+ V  + L +L +++
Sbjct: 528 GLAYGLDRLLMLFAKTDNIKDIIAFPKTQSATCPLTEAPTMVDDKALEDLNIKL 581


>gi|259503167|ref|ZP_05746069.1| aspartate-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259168882|gb|EEW53377.1| aspartate-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 595

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/589 (38%), Positives = 342/589 (58%), Gaps = 16/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT+  G+     VG  V L GWV + R  GG+IF+D+ D  GI Q+V N   +   F++A
Sbjct: 3   RTNYAGNTNEQQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKENPEVFKVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +VR+++VL + G V  R+ + IN ++ TG++E++   I++L+ +E  P  +    +  E
Sbjct: 63  NAVRNQYVLEVHGKVQLRAEKEINPDMKTGKVEVAVDDIKVLAKSETTPFDIADNVDASE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + KN+  R+++ + +      E F++  TP LT S+PEGARD++V
Sbjct: 123 DLRMKYRYLDLRRPEMMKNLKLRSKVASIVHNYYDGEGFLDVETPDLTRSTPEGARDYIV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLMA+G D+Y+Q+A CFRDED R DR P EF Q+D EMS
Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQP-EFTQIDTEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +DI    E +++ V +E   G  V   F R+ + +A+ +YG+DKPD R  +++H++
Sbjct: 242 FATPEDIQTVTEGLIKRVMKEVK-GIDVKTPFPRMEWQEAMDKYGSDKPDTRFGMLIHDL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++    S+F+VFS  ++ N G+ V AI   GG    +R    +  ++ +  G  GLA++ 
Sbjct: 301 SDIVKDSDFKVFSGTVA-NGGF-VRAICVPGGADKYSRKDISKKEDYIKRYGAKGLAWVK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GPVAK LN    + I   +  +DGD   F+A             R  I
Sbjct: 359 VTADGYN-----GPVAKFLND-KADQINAEMGAKDGDLILFVAASFHVVADSLGYLRRAI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLK-GNDLLSIK 478
           A+EL +I  + + + W++++P +E++E   K   AH+PFTM  +  +  L+ G D     
Sbjct: 413 AEELDMIKPDQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAH 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD++ NG EI  G IR H  +V  +    +G +KE  E RFG L +A   GMPP GG
Sbjct: 473 AQSYDIILNGQEIGGGSIRIHDPKVQEKVLKALGYTKERAEARFGFLLKALTMGMPPEGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           +A G+DR VMLL  A N+R+V  FP +    + L  +P  VS +QL +L
Sbjct: 533 LAFGLDRWVMLLAEADNIRDVIPFPKNSKAVEPLTAAPGKVSQQQLDDL 581


>gi|6573338|pdb|1C0A|A Chain A, Crystal Structure Of The E. Coli Aspartyl-Trna Synthetase
           : Trnaasp : Aspartyl-Adenylate Complex
          Length = 585

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/591 (38%), Positives = 334/591 (56%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    E I  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEDILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVK 585


>gi|190575574|ref|YP_001973419.1| aspartyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|229559939|sp|B2FRP1|SYD_STRMK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|190013496|emb|CAQ47131.1| putative aspartyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 583

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/590 (38%), Positives = 341/590 (57%), Gaps = 16/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV    D+A  F +A 
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNQGGVCFIDLRDHEGIVQVTVEVDNAEVFAVAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+  E VL ++G+V +R A  +N  + TG++E+ A  I +L+ A   PLP        E 
Sbjct: 62  SLGYEDVLQVEGVVRARHA--VNDKMRTGKVEVIATAITVLNKAA--PLPFHAHENPGEE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +    R +++ ++R  +  + F +  TPILT ++PEGARDFLVP
Sbjct: 118 TRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDEKGFQDIETPILTKATPEGARDFLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLDME +F
Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V + D+ + +E+++R +F+E  +   +  +F R+ + +A+RRYG+DKPDLR  + + +V 
Sbjct: 237 VRERDVQDFVEDMIRAIFKEVVDVQ-LDASFPRMTWAEAMRRYGSDKPDLRIALELVDVA 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           E    SEF VF+   +   G  V A+   GG   +R   D     A   G  GLAYI  +
Sbjct: 296 ELVKDSEFPVFTGPANDAEG-RVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLAYI--K 352

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + ++G ++   P+ K  +  +  A+   +   +GD  FF AG   K   F    R    +
Sbjct: 353 IADNGEIS--SPIQKFFSEASFAALVAHVGAGNGDIVFFGAGGYNKVSDFMGALRLKAGK 410

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           + G++  + +   W+ DFP +EW+EEE++    H+PFT P    +  L+ N   ++ +  
Sbjct: 411 DFGLV-ADGWAPLWVTDFPMFEWDEEEQRYVALHHPFTAPAVDDIADLRANARTAV-SRG 468

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGGIA 
Sbjct: 469 YDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIAF 528

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIDRI  L+ G +++R+V  FP +    DL+  +PS +   QL E+ +++
Sbjct: 529 GIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIVDAQLAEVHIQV 578


>gi|327481500|gb|AEA84810.1| aspartyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 558

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 224/564 (39%), Positives = 333/564 (59%), Gaps = 11/564 (1%)

Query: 36  IIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI 94
           +IFLD+RD  G+ QVV +PD A  F  A  VRSE+V+ + G V  R A  +N NI +G I
Sbjct: 1   MIFLDVRDREGLAQVVFDPDRAETFATADRVRSEYVIKVTGKVRLRPAGAVNPNIASGAI 60

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRC 154
           E+   ++E+L+ AE  P P+    +  E  R +YRF+DLRR  + + +  R+RI  S+R 
Sbjct: 61  EVLGYELEVLNDAETPPFPLNEYSDVGEETRLRYRFIDLRRPEMAEKLKLRSRITASIRR 120

Query: 155 RMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
            +    F++  TPIL   +PEGARD+LVPSR + G+F+ALPQ+PQ +KQLLM +GFDRY+
Sbjct: 121 YLDENGFLDVETPILGRPTPEGARDYLVPSRTHAGNFFALPQSPQLFKQLLMVAGFDRYY 180

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           QIA CFRDED R+DR P EF Q+D+E SF+++ DI+   E ++R +F+E  +       F
Sbjct: 181 QIAKCFRDEDLRADRQP-EFTQIDIETSFLDEADIIGITEGMIRKLFKEVLDLEF--GEF 237

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
             + +++A+RRYG+DKPDLR P+ + +V +     EF+VFS   + +P   V A+   G 
Sbjct: 238 PHMPFEEAMRRYGSDKPDLRIPLELVDVADQLNAVEFKVFSGPAN-DPKGRVAALRVPGA 296

Query: 335 GG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
               R+  D   ++    G  GLAYI       G      P+ K +   N   I  R+  
Sbjct: 297 ASMPRSQIDDYTKFVGIYGAKGLAYIKVNERAKGVEGLQSPIVKFIPEDNLNVILDRVGA 356

Query: 394 QDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            DGD  FF A D  K  S A  A R  +  +L ++ C+ +   W++DFP +E N ++  +
Sbjct: 357 VDGDIVFFGA-DKAKIVSEALGALRIKLGHDLKLLTCD-WAPLWVVDFPMFEEN-DDGSL 413

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
              H+PFT P+   + L+ N   ++ +  YD+V NG E+  G IR H  E+    F  +G
Sbjct: 414 SALHHPFTAPKCTPQELEANPSAAL-SRAYDMVLNGTELGGGSIRIHRKEMQQAVFRILG 472

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
           I +   E +FG L  A + G PPHGG+A G+DR+VML+ GA+++REV  FP +Q+  D++
Sbjct: 473 IDEAEQEEKFGFLLDALKFGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAADVM 532

Query: 573 MGSPSTVSVEQLRELGLRIVENPK 596
             +P  V  + LR+L +R+ E PK
Sbjct: 533 TQAPGAVDNKALRDLHIRLREQPK 556


>gi|146312080|ref|YP_001177154.1| aspartyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166979990|sp|A4WBM3|SYD_ENT38 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145318956|gb|ABP61103.1| aspartyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 590

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/596 (38%), Positives = 337/596 (56%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L  S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDLRDREGIVQVFFDPDRAEALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + INA++ TG+IE+ A  + I++ +E LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINADMATGEIEVLASDLTIINRSESLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKFRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVRELMEALVRSLWLDVKGVDL--GDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VFS   +   G  V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLLKAVEFAVFSGPANDAKG-RVAALRVPGGASLSRKQIDDYGNFVKIYGAKGLAYIKVT 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    E+I  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGIEGITSPVAKFLNAEIVESILERTGAQDGDMIFFGADNKKVVADALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +L + +   +   W++DFP +E ++ E  +   H+PFT  +    + LK     +I A  
Sbjct: 416 DLSLTDEAKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSAKDMNADELKAAPETAI-ANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHSGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+ +V+  +K
Sbjct: 534 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLAELGIDVVKKEEK 589


>gi|116071892|ref|ZP_01469160.1| Aspartyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116065515|gb|EAU71273.1| Aspartyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 610

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/601 (37%), Positives = 341/601 (56%), Gaps = 24/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL    + + V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSNGCGDLRKDSIDAVVQLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGAEAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119
           + +RSE VL + G V +R AE++N  + TG +E+ A +I +L+ V   LP PV    E  
Sbjct: 62  EHLRSETVLQVHGKVRARPAESLNDKLATGAVEVLASEIVVLNKVTGNLPFPVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR  ++ N+  R R I   R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRARTIQVARRFLEDEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YVLPSRVCGGDWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ ++ IL   E+++  +++    G  +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 241 EMSFMGEEQILQLNEDLICAIWKSV-KGIELPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-----NEWARSQGQP 354
             V++      F+VFS  +      +V A+P    GGN A  +       + ++ +Q   
Sbjct: 300 VTVSDIVQDMGFKVFSGAVKSGGAVKVIAVP----GGNDALSNVRIKPGGDVFSEAQAAG 355

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
                F R+ + G +  +G +  +L+      +  R     G    F AG+         
Sbjct: 356 AGGLAFIRVRDGGEIDTIGAIKDNLSDEQKAELLERTGATPGTLLLFGAGETAIVNKALD 415

Query: 415 DARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGM 466
             R ++A+EL ++      + + F W++DFP +E+N +E + +  H+PF  P     G  
Sbjct: 416 RVRQYLAKELKLVQPDRQNDAWNFLWVVDFPMFEFNGDEDRYEALHHPFCAPNTDDLGSD 475

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
            +     L S +A  YDLV NG E+  G +R H S +  Q    VG+  E  + +FG L 
Sbjct: 476 PAQWATTLPSARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQEQFGFLI 535

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            A   G PPHGG+A GIDR+VMLL G +++R+   FP +Q    L+  +PS+V+ +QL+E
Sbjct: 536 NALDMGAPPHGGLAFGIDRMVMLLAGEESIRDTIAFPKTQQARCLMTDAPSSVAEKQLQE 595

Query: 587 L 587
           L
Sbjct: 596 L 596


>gi|332827897|gb|EGK00619.1| aspartyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 584

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 225/594 (37%), Positives = 337/594 (56%), Gaps = 21/594 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD--SACFE 60
           YR H+CG+L ++DV   V L+GWV +VR   GG+ F+D+RD YGITQ+  + D  +  +E
Sbjct: 2   YRNHTCGELTLADVNKEVTLAGWVQKVRKLGGGMTFVDLRDRYGITQLAFSKDVNADLYE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            +     E+VL + G V  RS++  N NI TG+IE+   K+ IL+ +E  P  +  E + 
Sbjct: 62  QSNKFGREYVLQVTGTVQERSSK--NMNIPTGEIEIIVNKLVILNTSEVPPFTIEDETDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + KN+  R +I    R  +    FIE  TP+L  S+PEGARDF
Sbjct: 120 GEDLRMKYRYLDLRRTPVRKNLELRHKIAFETRRFLDERQFIEVETPVLIGSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNPGEFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MS+V Q+D+LN  E + + +F++    +    +F R+ Y  A++ YG+DKPD R  +   
Sbjct: 239 MSYVSQEDVLNMFEGLTKHLFKKVKGIDI--PDFPRMTYAHAMKYYGSDKPDTRFGMEFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-GGNRAFCDRMNEWARSQ--GQPGLA 357
            + +     +F VF     V       AI AKG     R   D + ++ +    G  GL 
Sbjct: 297 EIKDLTTGKDFVVFDSCEYVG------AICAKGAVSYTRKQLDALTDYVKRPQIGAKGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+ +  D S   +    V K     + +    R   + GD    I G+  K      + R
Sbjct: 351 YVRYEADGSLKSS----VDKFYTAEDLKKWAERCQAEPGDLILIICGETEKAQKQLCELR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP  E +EE  +    H+PFT P+     +  +D  ++
Sbjct: 407 LEVGDQLGLRDKNKFNCLWVIDFPLLEKDEELGRFFAKHHPFTSPKEEDIPMLESDPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G +R H S++  + F  +G ++E  + +FG L  AF+ G PPH 
Sbjct: 467 RANAYDMVINGVEVGGGSVRIHNSQLQNKMFHVLGFTEEKAQAQFGFLMNAFKYGAPPHA 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR+V L  G  ++R+   FP + +  D+++ +P+ +  EQL EL L++
Sbjct: 527 GLAFGLDRLVSLFAGLDSIRDCIAFPKNNSGRDVMIDAPAVLEQEQLDELNLKV 580


>gi|329906027|ref|ZP_08274328.1| Aspartyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327547359|gb|EGF32189.1| Aspartyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 601

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/594 (38%), Positives = 340/594 (57%), Gaps = 12/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG    + +G  V L GWVHR R HGG+IF+D+RD  G+ QVV NP+ A  F  A+
Sbjct: 4   RTHYCGLTTEALLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCNPEQAEVFSTAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + G+V  R   T N+N+ +G+IE+  +++E+L+ +   P  +  +    E+
Sbjct: 64  IVRNEFCMRVTGVVRLRPDGTANSNLPSGKIEVLCEQLEVLNPSVTPPFQL-DDDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  + +  FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQNNLRLRYKVTMEVRKFLDSHGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQIVKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+   + + + N F  + Y +++  YG+DKPD+R  +   ++T
Sbjct: 242 MNEQEIRDLFEGMIRLVFKNALDID-LPNPFPVMPYSESMGLYGSDKPDMRVKLAFTDLT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E     +F+VFS   ++  G  V      G    R+  D   ++    G  GLAYI    
Sbjct: 301 EVMKDVDFKVFSGAANMLGGRVVGMRVPGGSAMPRSEIDAYTQFVGIYGAKGLAYIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+      I      QDGD  FF A D  K  + A  A       
Sbjct: 361 IAKGREGLQSPIVKNLHDAALTRILELTGAQDGDLIFFGA-DKAKIVNDAIGALRVKIGH 419

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   ++  + + + ++  W++DFP +E++EE  +   AH+PFT P+ G E     D    
Sbjct: 420 SDFGKKHDLFD-DVWKPLWVVDFPMFEYDEEGDRWHAAHHPFTAPKDGHEDFLETDPGKC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+E+  G +R H +EV  + F  + I  +  + +FG L  A Q G PPHG
Sbjct: 479 IAKAYDMVLNGWELGGGSVRIHRAEVQSKVFRAMKIDDDEAQLKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V  +QLREL +R+
Sbjct: 539 GLAFGLDRIVTMMTGADSIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRL 592


>gi|327540384|gb|EGF26970.1| Aspartyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 568

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/569 (39%), Positives = 328/569 (57%), Gaps = 16/569 (2%)

Query: 31  RPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCIDGLVMSRSAETINA 87
           R HGG +F+D+RD YG+TQVV  P   + A  + A  V +E V+ I G+V  R     NA
Sbjct: 5   RDHGGAVFIDLRDRYGLTQVVIGPPEANEALIKQAGHVPNESVILIRGVVADRLEGKTNA 64

Query: 88  NIITGQIELSAQKIEILSVAEELPLPVFGEREYP-ESIRFKYRFLDLRRDTLHKNIVKRT 146
            + TG+IE+ ++  EILS +E  P    G+ + P E +R KYRFLDLRR  + + +++R+
Sbjct: 65  KLETGEIEVRSEHFEILSASETPPF-TPGQSDLPGEDLRLKYRFLDLRRKEMQQALIRRS 123

Query: 147 RIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
            II  MR      +FI+  TPIL  S+PEGARD+LVPSRV+  +FYALPQ+PQ YKQ+LM
Sbjct: 124 EIIKCMRDYFAEHDFIDVETPILGRSTPEGARDYLVPSRVHPSNFYALPQSPQLYKQILM 183

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
            +GFDRY Q+A CFRDED R+DR P EF QLD+EMSFV+ +DI+  ++ ++    ++   
Sbjct: 184 VAGFDRYVQVAKCFRDEDLRADRQP-EFTQLDLEMSFVDSEDIIGLIDGLVAKTAKQVL- 241

Query: 267 GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEV 326
           G  ++    R+ Y++A+RR+G+D PDLR  + + +VT     ++FRVF    + + G  V
Sbjct: 242 GKDITLPLPRMTYEEAMRRFGSDAPDLRFGLEIVDVTSVAAKTDFRVFRG--TADAGNFV 299

Query: 327 WAIPAKGGG--GNRAFCDRMNEWARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVN 383
             I  K      +R   D +  + +   G  GLA+  +R+++ G +    P+AK+ +  +
Sbjct: 300 RGINVKDSALKFSRRQIDELTAFVQQDFGAKGLAW--FRVEDDGTL--WSPIAKNFDEEH 355

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFY 443
              I+  +  + GD   F+A      C   +  R  +A EL +         W+ +FP +
Sbjct: 356 LAEIKALMGGEPGDLLMFLADTWEVTCKGLSGLRKRLAVELKLYEDGELNCSWVTEFPMF 415

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E +EE  +    H+PFT P      L        +A  YDLV NG E   G IR H S+V
Sbjct: 416 EKDEEAGRYVAMHHPFTAPLEEDLPLLKESPEKCRAQAYDLVINGSEAGGGTIRIHDSKV 475

Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             Q F  +G+ +E   +RFG L  A + G PPHGGIA G+DR VML  G +N+REV  FP
Sbjct: 476 QSQVFELLGMDEETARDRFGFLLDALRFGAPPHGGIALGVDRWVMLFAGLENIREVIAFP 535

Query: 564 MSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            +Q   D++ G+P  V  +QL EL LR V
Sbjct: 536 KTQKAADMMTGAPGEVDADQLNELHLRTV 564


>gi|290475273|ref|YP_003468161.1| aspartate tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289174594|emb|CBJ81388.1| aspartate tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 589

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 224/592 (37%), Positives = 338/592 (57%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L ++  G  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    F  A 
Sbjct: 2   RTNYCGQLSLAHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQKEAFAQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G+V +R    IN  + TG++E+ A  + + + +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGIVRARPDSQINKEMATGEVEVFADSLMVFNRSE--PLPLDSNQNNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R ++ N +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSLRLKTRAKVTNFVRRFMDNAGFLDVETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   MEN++R ++ +  N +     F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREIMENMIRELWLDARNVDL--GKFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + EF VF++  + +P   V  I   GG   +R   D   ++    G  GLA++   
Sbjct: 297 DLVKNVEFAVFAEPAN-DPKGRVATICVPGGAELSRKQIDEYGKFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK L+    E +  R + QDGD  FF A             R  + +
Sbjct: 356 NRAAGLEGVQSPVAKFLSAEVVEGLLSRTNAQDGDILFFGADKKNVVTDAMGALRLKLGR 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L I +   ++  W++DFP +E N  E  +   H+PFT P     +   +D  S  A  Y
Sbjct: 416 DLNITDLASWKPLWVIDFPMFEDN-GEGGLHAMHHPFTSPCDMSATELEHDPESAIANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H +E+    F  +GI++E  + +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHRNEMQQVVFRILGITEEEQQEKFGFLLNALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+VMLL    N+R+V  FP +     L+  +PS  +   L EL + +V+ 
Sbjct: 535 LDRLVMLLTDTDNIRDVIAFPKTTAAACLMTEAPSYANPASLEELAISVVKK 586


>gi|124005873|ref|ZP_01690711.1| aspartyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123988556|gb|EAY28197.1| aspartyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 594

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/605 (37%), Positives = 347/605 (57%), Gaps = 26/605 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH+CG+L +  VG  V L GWV + R  GG+IF+DIRD YG+TQ+ A   N D    E 
Sbjct: 3   RTHTCGELRIDHVGQKVTLCGWVQKNRDKGGLIFVDIRDRYGVTQLQADETNTDDQVVER 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            + +  E+V+   G V+ R+++  N  + TG +E+    IEIL+ A+  P  +  + +  
Sbjct: 63  LRQLGREFVVYATGNVIERASK--NPQMPTGDVEVQVTDIEILNEAKVPPFLIEDDTDGG 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R +YR+LDLRR+ + + +  R +I   +R  +  ++FIE  TP+L  S+PEGARDF+
Sbjct: 121 DELRMQYRYLDLRRNVVRQKLELRNQINREVRNFLDTQDFIEVETPVLIKSTPEGARDFV 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N+G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D EM
Sbjct: 181 VPSRMNEGQFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDCEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV ++DIL+T E ++R +F+     +      +   YDDA+R YG+DKPD R  +    
Sbjct: 240 SFVTREDILSTFEGLIRHLFKTVKGVDLPEVPVME--YDDAMRLYGSDKPDTRFGMEFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQ--GQPGLA 357
           + +   +  F+VF      +    V  I AKG     +R   D +  + +    G  GL 
Sbjct: 298 LNDVAQNKGFKVF------DDAQLVVGICAKGIAEEYSRKKIDELTNFVKRPQIGAKGLV 351

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+ +  D S   +    V K  +  + +   V+++++ GD    ++G+         + R
Sbjct: 352 YVKYNKDGSFKSS----VDKFYSQEDLKEWAVKMNVEPGDMLLVLSGNTNTVRKQLNELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND--LL 475
             +   LG+ +   F   W++DFP  E +EE  K    H+PFT P+ G E+L  ND  L 
Sbjct: 408 LEMGNRLGLRDPQKFSALWVVDFPLLEQDEETGKWHAMHHPFTSPKAGQEALLENDSQLA 467

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           +IKA  YD+V NG E+  G IR +   +  +  S +G + E  + +FG L  AF+ G PP
Sbjct: 468 NIKANAYDMVINGVELGGGSIRIYQRPMQEKMLSLLGFTPEEAKAQFGFLMDAFEYGAPP 527

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR--IVE 593
           HGGIA G DRI  +  G  ++R+   FP + +  D+++ +PS +  EQL ELGL+  +VE
Sbjct: 528 HGGIAFGFDRICAVFGGVDSIRDFIAFPKNNSGRDVMINAPSAIDNEQLTELGLKLNLVE 587

Query: 594 NPKKI 598
             +K+
Sbjct: 588 AEEKV 592


>gi|332305755|ref|YP_004433606.1| aspartyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173084|gb|AEE22338.1| aspartyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 592

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 220/588 (37%), Positives = 338/588 (57%), Gaps = 11/588 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG++  S +G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  F+ A 
Sbjct: 2   RTDYCGNINASHIGQTVTLCGWVNRRRDLGGVIFIDLRDREGIVQVVYDPDLADLFDTAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE+ + I+GLV +R    +N ++ TG+IE+  + + IL+ +  LPL     +E  E 
Sbjct: 62  SLRSEFCVQIEGLVRARPQGQVNKDMGTGEIEILGKGLTILNKSAVLPLD--SNQENSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R ++ +++R  +  + F++  TPILT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPVMSDRLKFRAKVTSAVRSYLEGDGFLDIETPILTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D+E +F
Sbjct: 180 SRTHKGKFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETTF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++R +F +  N +     F ++ Y DA+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 LSAEQVMEITEGMIRDLFMKMLNVDL--GAFPQMTYADAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V  I   GG    R   D   ++    G  GLA++   
Sbjct: 297 DILKDVEFKVFSGPANDAEG-RVAVIRVPGGSSMTRKQIDEYTKFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             ++G      P+ K L     + +  R++ Q GD   F A             R  + +
Sbjct: 356 DIDAGVDGLQSPILKFLGEDVAKQVLSRVEAQSGDILLFGADTATVVTEALGALRLKVGE 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L ++    ++  W++DFP +E  E + +    H+PFT P+         D  +  +  Y
Sbjct: 416 DLNLLEGE-WKPLWVIDFPMFE--EFDGQFYALHHPFTAPRDMTPEQLAADPANALSNAY 472

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R H  ++  + F+ +GIS E  E +FG L  A + G PPH G+A G
Sbjct: 473 DMVLNGCELGGGSVRIHDQDMQAKVFNILGISDEEAEVKFGFLLDALKFGAPPHAGLAFG 532

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           +DR+VML+ GA ++R+V  FP +      L  +P   S EQL+EL ++
Sbjct: 533 LDRLVMLMTGATSIRDVMAFPKTTTAACPLTDAPGVASDEQLKELSIK 580


>gi|327394178|dbj|BAK11600.1| aspartyl-tRNA synthetase AspS [Pantoea ananatis AJ13355]
          Length = 592

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 227/595 (38%), Positives = 336/595 (56%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  + D    F++A 
Sbjct: 2   RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIAQVFFDADHQDAFQLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N+++ TG +E+ A  + I++ AE  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARDEKNRNSDMATGDVEVFAHALNIINRAE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMVERLKTRAKITSFVRRFMDDAGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R +++     +     F ++ + +A+ RYG+DKPDLRNP+ + +V 
Sbjct: 239 LTAPQVREIMERMIRELWQSVKGVDL--GEFPQMTFAEAMHRYGSDKPDLRNPMELVDVG 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V A+   GG   +R   D   ++    G  GLA++   
Sbjct: 297 DLLKTVEFQVFSGPANDEKG-RVAALRVPGGAQLSRKQIDEYGKFVEIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK LN    E +  R   QDGD  FF A D  K  + A  A R  + 
Sbjct: 356 ERAMGLEGVQSPVAKFLNADIVETLLSRTSAQDGDIIFFGA-DRAKVVADALGALRLKVG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L I +   +   W++DFP +E  ++E  +   H+PFT P+         D     A  
Sbjct: 415 RDLQITDDKAWAPLWVVDFPMFE-EDDEGGLAAMHHPFTAPKEMSAEQLAADPTQAVANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H   +    FS +GI +     +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHNGNMQQTVFSILGIEEHEQREKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+ MLL G  N+R+V  FP +     ++  +PS  +   L ELG+++V+  K
Sbjct: 534 GLDRLTMLLTGTDNIRDVIAFPKTTAAACMMTEAPSEANPASLLELGIQVVKKDK 588


>gi|109899255|ref|YP_662510.1| aspartyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123170932|sp|Q15RN2|SYD_PSEA6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|109701536|gb|ABG41456.1| aspartyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 592

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 219/588 (37%), Positives = 339/588 (57%), Gaps = 11/588 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG++  S +G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  F+ A 
Sbjct: 2   RTDYCGNINASHIGQTVTLCGWVNRRRDLGGVIFIDLRDREGIVQVVYDPDLAELFDTAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE+ + I+GLV +R    +N ++ TG+IE+  + + IL+ +  LPL     +E  E 
Sbjct: 62  SLRSEFCVQIEGLVRARPQGQVNKDMGTGEIEILGKGLTILNKSAVLPLD--SNQENSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R ++ +++R  +  + F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPVMSDRLKFRAKVTSAVRSYLEGDGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D+E +F
Sbjct: 180 SRTHKGKFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETTF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++R +F +  N +     F ++ Y DA+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 LGAEQVMKITEGMIRNLFMKMLNVDL--GEFPQMTYADAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V  I   GG    R   D   ++    G  GLA++   
Sbjct: 297 DILKDVEFKVFSGPANDAKG-RVAVIRVPGGASMTRKQIDEYTKFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             ++G      P+ K L     + +  R++ Q GD   F A             R  + +
Sbjct: 356 DIDAGLEGLQSPILKFLGEDVAKQVLSRVEAQSGDILLFGADSATVVTEALGALRLKVGE 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L ++    ++  W++DFP +E  E + +    H+PFT P+         D  +  +  Y
Sbjct: 416 DLDLLEGE-WKPLWVIDFPMFE--EFDGQFYALHHPFTAPRDMTAEQLAADPANALSNAY 472

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R H  ++  + F+ +GIS+E  E +FG L  A + G PPH G+A G
Sbjct: 473 DMVLNGCELGGGSVRIHNQDMQAKVFNILGISEEEAEVKFGFLLDALKFGAPPHAGLAFG 532

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           +DR+VML+ GA ++R+V  FP +      L  +P   S EQL+EL ++
Sbjct: 533 LDRLVMLMTGATSIRDVMAFPKTTTAACPLTDAPGIASDEQLKELSIK 580


>gi|311279234|ref|YP_003941465.1| aspartyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308748429|gb|ADO48181.1| aspartyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 590

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 228/595 (38%), Positives = 344/595 (57%), Gaps = 15/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L  S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F++A 
Sbjct: 2   RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRVDAFKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R    +N ++ TG++E+ A  + I++ AE  PLP+   +   E 
Sbjct: 62  ELRNEFCIQVTGTVRARDERNVNRDMATGEVEVFATDLTIINRAE--PLPLDSNQVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEAMVRQMWLEIKGVDL--GDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + EF VF+   + +P   V A+   GG   +R   D    + +  G  GLAYI  +
Sbjct: 297 DLLKNVEFAVFAGPAN-DPKGRVAALRVPGGASLSRKQIDDYGNFIKIYGAKGLAYI--K 353

Query: 363 LDESGN-VAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           ++E  N + G+  PVAK LN    E I  R   QDGD  FF A +           R  +
Sbjct: 354 VNERANGLDGINSPVAKFLNAEIVEEILARTGAQDGDMIFFGADNKKVVADALGALRLKL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKA 479
            ++L +   + +   W++DFP +E  + E  +   H+PFT P+    + LK     ++ A
Sbjct: 414 GKDLSLTAESKWAPLWVIDFPMFE-EDGEGGLTAMHHPFTSPKDMTAAELKAAPEEAV-A 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H  ++    F  +GI+++    +FG L  A + G PPH G+
Sbjct: 472 NAYDMVINGYEVGGGSVRIHRGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+ 
Sbjct: 532 AFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLAELGIQVVKK 586


>gi|24113215|ref|NP_707725.1| aspartyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|46577188|sp|Q7UAE6|SYD_SHIFL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|24052211|gb|AAN43432.1| aspartate tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|281601281|gb|ADA74265.1| Aspartyl-tRNA synthetase [Shigella flexneri 2002017]
          Length = 590

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/592 (38%), Positives = 334/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +              + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586


>gi|330718277|ref|ZP_08312877.1| aspartyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 592

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 235/599 (39%), Positives = 342/599 (57%), Gaps = 21/599 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           RT   G +    +   V L+GWV + R  GG+IF+D+RD  GI Q+  N  ++A  ++A+
Sbjct: 3   RTTYAGLVDEQYLDQTVTLTGWVQKRRDFGGLIFVDLRDREGIVQLTFNETNAAALKVAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+V+ + G+V  RS    N NI TG+IE+     EIL+ A+  P  +       E 
Sbjct: 63  EMRSEYVIEVTGVVHLRSEGQENNNIKTGKIEIEVTDAEILASAKTTPFYIEDNVNANEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           ++ +YR+LDLRR  + KN+  R++I++S    M   +FI   TPIL  S+PEGARD+LVP
Sbjct: 123 LKLQYRYLDLRRPEMQKNLRIRSKIMSSAMHFMTTHDFINIETPILAKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+  GSFYALPQ+PQ +KQLLM +GFDRYFQIA  FRDED R DR P EF Q+D+E SF
Sbjct: 183 SRIFPGSFYALPQSPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQP-EFTQMDVETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D+I + +   ++ + +E  + +  + +   + + +++ R+GTDKPDLR    + +++
Sbjct: 242 MSADEIRHLVNEWVKVMMKEVVDFDLDTQSIPTLTWQESMDRFGTDKPDLRIAYEIQDLS 301

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIFW 361
                SEF VF+   +V  G  V AI   GG  +  R   D+M ++    G  GLA   W
Sbjct: 302 ATVAQSEFGVFAN--AVKDGGVVKAISVPGGADHYSRKDIDKMAQYIERFGAKGLA---W 356

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD---ARN 418
               S  V+  GP+AK       + I      Q GD   F AG   +F   +A     R 
Sbjct: 357 LKVTSEGVS--GPIAKFFAEDAQQVIDA-AGAQVGDLILFGAG---RFDVVSATLDYLRR 410

Query: 419 HIAQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL-KGNDLL 475
             A++L ++ N N + F WI+D+P +E++E+  +   AH+PFTMP +  +  L +G D  
Sbjct: 411 QTAKDLNLVDNTNPWAFAWIVDWPLFEYSEDFDRWISAHHPFTMPNEEDLHYLDEGEDPH 470

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              A  YDLV NGFE+ SG IR H  ++  +    +G SKE     FG L  A + G PP
Sbjct: 471 KAHAQSYDLVLNGFELGSGSIRIHRMDIQEKMLKALGFSKEKAHEAFGFLLEAMEYGFPP 530

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            GGIA G+DR+ MLL G +N+REV  FP +    + +  +PS V  +QL ELGL   E+
Sbjct: 531 MGGIALGLDRLAMLLAGQENIREVIAFPKNSRATEPMTKAPSRVEQKQLLELGLFTSED 589


>gi|78185800|ref|YP_378234.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|97196970|sp|Q3AVS9|SYD_SYNS9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78170094|gb|ABB27191.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 610

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 221/601 (36%), Positives = 340/601 (56%), Gaps = 24/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL    + + V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSNGCGDLRKDSIDAVVQLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGAEAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV--FGERE 119
           + +RSE VL + G V +R AE++N  + TG +E+ A +I +L+ V   LP PV    E  
Sbjct: 62  EHLRSETVLQVHGKVRARPAESLNDKLATGAVEVLASEIVVLNKVTGNLPFPVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR  ++ N+  R R I + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRARTIQAARRFLEDEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YVLPSRVCGGDWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ ++ IL   E+++  +++    G  +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 241 EMSFMGEEQILQLNEDLICAIWKSV-KGIELPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-----NEWARSQGQP 354
             V++      F+VFS  +      +V A+P    GGN A  +       + ++ +Q   
Sbjct: 300 VTVSDIVQDMGFKVFSGAVKSGGSVKVIAVP----GGNDALSNVRIKPGGDVFSEAQAAG 355

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
                F R+ + G +  +G +  +L+      +  R     G    F AG+         
Sbjct: 356 AGGLAFIRVRDGGEIDTIGAIKDNLSDEQKAELLKRTGATPGTLLLFGAGETAIVNKALD 415

Query: 415 DARNHIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGM 466
             R ++A+EL ++      + + F W++DFP +E+N +E + +  H+PF  P     G  
Sbjct: 416 RVRQYLAKELNLVKPDRQNDAWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNTDDLGSD 475

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
            +     L   +A  YDLV NG E+  G +R H S +  Q    VG+  E  + +FG L 
Sbjct: 476 PAQWATTLPKARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQAQFGFLI 535

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            A   G PPHGG+A G+DR+VMLL G  ++R+   FP +Q    L+  +PS+V+ +QL+E
Sbjct: 536 NALDMGAPPHGGLAFGVDRMVMLLAGEDSIRDTIAFPKTQQARCLMTDAPSSVAEKQLQE 595

Query: 587 L 587
           L
Sbjct: 596 L 596


>gi|53729050|ref|ZP_00134141.2| COG0173: Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208619|ref|YP_001053844.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|165976576|ref|YP_001652169.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|307246064|ref|ZP_07528146.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307250405|ref|ZP_07532352.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307255046|ref|ZP_07536864.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307259482|ref|ZP_07541207.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|166225314|sp|A3N1F3|SYD_ACTP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238687571|sp|B0BQ90|SYD_ACTPJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|126097411|gb|ABN74239.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
 gi|165876677|gb|ABY69725.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|306852999|gb|EFM85222.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306857534|gb|EFM89643.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306861919|gb|EFM93895.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306866418|gb|EFM98281.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 591

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 225/595 (37%), Positives = 342/595 (57%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S VG  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+IA 
Sbjct: 3   RSHYCGALNRSHVGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKIAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE  + I G V++R    IN  + TG+IE+  + + + + A+ LPL  F +    E 
Sbjct: 63  SLRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNVVVYNNADVLPLD-FNQNNTEEQ 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 122 -RLKYRYLDLRRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHNGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   MEN++ G++      N     F  + + +A++R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAEEVRELMENMIHGLW--LDRLNVDLGKFPIMTWQEAMQRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  +   G   V  +P  G    R   D   ++    G  GLA+    
Sbjct: 298 DILKDVEFKVFNEPANSADGRVTVLRVP-NGASLTRKQIDEYTQFVGIYGAKGLAWAKIN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN    +A+  R +   GD  FF A             R  + +
Sbjct: 357 NVNAGMEGIQSPVAKFLNEEVFKALIERTNATSGDILFFGADKWQVVTDSMGALRLKVGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +L + + + ++  W++DFP +E  ++E  +   H+PFT P+    E L  N + ++ A  
Sbjct: 417 DLALTDLSAWKPLWVIDFPMFE-KDDEGNLSAMHHPFTSPKNLTPEELAANPVNAV-ANA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  ++    F  +GI+++  + +FG L  A + G PPH G+A 
Sbjct: 475 YDMVINGYEVGGGSVRIYDPKMQQTVFGILGINEQDQQEKFGFLLDALKFGTPPHAGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L ELG+ +++  K
Sbjct: 535 GLDRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELGIAVLKKEK 589


>gi|325955285|ref|YP_004238945.1| aspartyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437903|gb|ADX68367.1| aspartyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 589

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 216/592 (36%), Positives = 341/592 (57%), Gaps = 17/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           +RTH+CG L  +++   V LSGWV  +R  G ++++D+RD YGITQ++ + D   +  FE
Sbjct: 2   FRTHTCGQLTQANINEKVTLSGWVATLRDKGFMLWIDLRDRYGITQIILDEDRSSTELFE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V+ R+A+  N  + TG+IE+ A++I+IL+ +   P  +  + + 
Sbjct: 62  TALLLGREYVIQVTGTVIERTAK--NPQLATGEIEILAEEIKILNESALPPFTIEDQTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR+ +   ++ R+++   +R  + A++F+E  TP+L  S+PEGARDF
Sbjct: 120 GEDLRMKYRYLDIRRNPVKDKLIFRSKVAQEVRKYLDAQDFVEVETPVLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNPGQFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI+   E + + + + F N +     F R+ Y +A++RYG DKPD+R  +   
Sbjct: 239 MSFVEQEDIIEVFEGLTKHLLKTFKNLDF--EQFPRMTYAEAMKRYGNDKPDIRFGMEFA 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +T+      F VF     V     V     +     R   D++ +W + + Q G + + 
Sbjct: 297 EITDLAQGKGFSVFDDQELV-----VGIAAEQCNSYTRKDIDKLIDWVK-RPQIGASGLI 350

Query: 361 W-RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           W R +E G       V K     +  A   R++ + GD    ++G   K     +  R  
Sbjct: 351 WVRCNEDGTYK--SSVDKFFTEDDLAAWAKRMNAKPGDLLLIMSGKGDKVRGQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           I + LG+   + F   W++DFP  EW++E ++    H+PFT P+     L   +   ++A
Sbjct: 409 IGERLGLRKPDEFAPLWVVDFPLLEWDDETQRYYAMHHPFTSPKVEDYDLIKTNPGEVRA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR    ++  + F  +G S E  E +FG L  AF+ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIFDRKLQAEMFELLGFSPEQAEAQFGFLMNAFKYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G DR+V +L G++ +R+   FP + +  D+++ +P+ +   QL EL ++I
Sbjct: 529 AFGFDRLVSILDGSETIRDYIAFPKNNSGRDVMIDAPAKIDEAQLEELSIKI 580


>gi|227355386|ref|ZP_03839787.1| aspartyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|227164610|gb|EEI49481.1| aspartyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 581

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 213/580 (36%), Positives = 330/580 (56%), Gaps = 8/580 (1%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75
           +G  V L GWV+R R  GG+IF+D+RD  GI QV  +P+    F  A  +R+E+ + + G
Sbjct: 1   MGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPEQKEAFSQASELRNEFCIQVTG 60

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V +R    +N N+ TG+IEL+A+ + I + +E LPL     +   E  R  YR+LDLRR
Sbjct: 61  TVRARPDSQVNKNMATGEIELAAESLSIFNRSEALPLD--SNQTNTEERRLTYRYLDLRR 118

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             + + +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVPSRV++G FYALP
Sbjct: 119 PEMSQRLKTRAKITSFVRRFMDGEGFLDVETPMLTKATPEGARDYLVPSRVHKGKFYALP 178

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+  + +   ME 
Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAEQVREVMER 237

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++  ++ +  N +     F  + + +A+RRYG+DKPDLRNP+ + ++ +   + EF VF+
Sbjct: 238 MIHALWLDILNVDL--GAFPVMTFAEAMRRYGSDKPDLRNPMELIDIADLVKNVEFSVFA 295

Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374
           +  + +    V A+   GG    R   D   ++    G  GLA++       G      P
Sbjct: 296 QAAN-DEKCRVIALRVPGGASLTRKNIDEYTQFVSIYGAKGLAWMKVNEKAKGIEGVQSP 354

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
           +AK L      +I    +  DGD  FF AG            R  + ++L + + N ++ 
Sbjct: 355 IAKFLTNDVVNSILATTNATDGDLIFFGAGRQGTMSDAMGALRLKVGRDLELTDLNAWKP 414

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            W++DFP +E +E+   +   H+PFT P+    +      +   A  YD+V NG+E+  G
Sbjct: 415 LWVIDFPMFEEDEDTGSLSAMHHPFTSPKDLTPAELTAHPVGAVANAYDMVINGYEVGGG 474

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +R H +E+    FS +GI+ +    +FG L  A + G PPH G+A G+DR+VMLL G  
Sbjct: 475 SVRIHRNEMQQAVFSILGITPDEQREKFGFLLDALKFGTPPHAGLAFGLDRLVMLLTGTD 534

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           N+R+V  FP +     L+  +PS  + + L+EL +++ E 
Sbjct: 535 NIRDVIAFPKTTAAACLMTNAPSFANEDALKELAIQVTEK 574


>gi|190150477|ref|YP_001969002.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307257203|ref|ZP_07538975.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|307261631|ref|ZP_07543299.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|307263821|ref|ZP_07545426.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|238692343|sp|B3GY37|SYD_ACTP7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189915608|gb|ACE61860.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306864365|gb|EFM96276.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306868754|gb|EFN00563.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306870810|gb|EFN02549.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 591

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 225/595 (37%), Positives = 342/595 (57%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S VG  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+IA 
Sbjct: 3   RSHYCGALNRSHVGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKIAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE  + I G V++R    IN  + TG+IE+  + + + + A+ LPL  F +    E 
Sbjct: 63  SLRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNVVVYNNADVLPLD-FNQNNTEEQ 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 122 -RLKYRYLDLRRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHNGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   MEN++ G++      N     F  + + +A++R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAEEVRELMENMIHGLW--LDRLNVDLGKFPIMTWQEAMQRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  +   G   V  +P  G    R   D   ++    G  GLA+    
Sbjct: 298 DILKDVEFKVFNEPANSADGRVTVLRVP-NGASLTRKQIDEYTQFVGIYGAKGLAWAKIN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN    +A+  R +   GD  FF A             R  + +
Sbjct: 357 DVNAGMEGIQSPVAKFLNEEVFKALIERTNATSGDILFFGADKWQVVTDSMGALRLKVGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +L + + + ++  W++DFP +E  ++E  +   H+PFT P+    E L  N + ++ A  
Sbjct: 417 DLALTDLSAWKPLWVIDFPMFE-KDDEGNLSAMHHPFTSPKNLTPEELAANPVNAV-ANA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  ++    F  +GI+++  + +FG L  A + G PPH G+A 
Sbjct: 475 YDMVINGYEVGGGSVRIYDPKMQQTVFGILGINEQDQQEKFGFLLDALKFGTPPHAGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L ELG+ +++  K
Sbjct: 535 GLDRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELGIAVLKKEK 589


>gi|260590987|ref|ZP_05856445.1| aspartate--tRNA ligase [Prevotella veroralis F0319]
 gi|260536852|gb|EEX19469.1| aspartate--tRNA ligase [Prevotella veroralis F0319]
          Length = 585

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/598 (37%), Positives = 341/598 (57%), Gaps = 28/598 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60
           YRT++CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V   A+  S C E
Sbjct: 2   YRTNTCGELRLSDAGKEVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEADDASLCGE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K  R E+ + + G+V  R ++  N  I TG IE+ A+++ +LS +   P  +    + 
Sbjct: 62  ANKLGR-EYCIQVKGIVSERQSK--NNKIPTGDIEIIAKELNVLSPSLTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR+ + KN+  R R+   +R  + ++ F+E  TPIL  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRREAVRKNLELRHRMTILIRNFLDSQKFMEVETPILIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+  G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMTPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++N  E + R +F E            ++ + +A++R+G+DKPDLR  +   
Sbjct: 238 MSFVDQDDVINLFEEMARHLFREIRGVEL--PKLEQMTWHEAMKRFGSDKPDLRFGMEFV 295

Query: 301 NVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAY 358
            + +    +  F VF +   +        +P       +   +  +   R Q G  GL +
Sbjct: 296 ELIDELKGTGSFSVFDEAKYIGG----IVVPGCADYSRKQLNELTDFVKRPQVGAHGLVF 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-----PLKFCSFA 413
           I +  D  G +     + K       + ++     +DGD    ++GD      ++ CS  
Sbjct: 352 IKYNTD--GTIK--SSIDKFYTPEQLQKVKETTGAKDGDLVLILSGDNANKTRVQLCSL- 406

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
              R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L    
Sbjct: 407 ---RLEMGDRLGLRDKNVFKCLWIIDFPLFEWSDEEQRLMATHHPFTMPNLDDIPLLDEH 463

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              ++A  YD VCNG E+  G +R H +++  + F  +G + E  E +FG L  AF+ G 
Sbjct: 464 PEQVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTPERAEAQFGFLMNAFKYGA 523

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPH G+A G+DR V +L G  ++R+   FP + +  D+++ +PS +  +QL EL L++
Sbjct: 524 PPHAGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLDAPSIIDQKQLDELELKL 581


>gi|225013098|ref|ZP_03703512.1| aspartyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225002756|gb|EEG40738.1| aspartyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 586

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 227/600 (37%), Positives = 338/600 (56%), Gaps = 21/600 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           YRTH CG+L +  +   V LSGWV + R  G II+ D+RD YGITQ++ + +    A FE
Sbjct: 2   YRTHHCGELSLEHLNQTVTLSGWVQKNRNKGFIIWTDLRDRYGITQLIFDEERTPKAVFE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +  E+V+ I G V+ R  E+ NAN+ TG IE+  + + +L+ ++  P  +  + + 
Sbjct: 62  KAQGLGREFVIQIQGKVIER--ESKNANMNTGDIEVLVENLTLLNASKTPPFTIEDQTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R ++R+LD+RR+ + + ++ R+++  ++R  +    FI+  TP L  S+PEGARDF
Sbjct: 120 GEELRMQFRYLDIRRNPVKQKLMFRSKVSMAVRNYLTDAGFIDVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DILN  E + + + +  S        F R+ YD+A++ YG DKPD+R  +   
Sbjct: 239 MTFVEQEDILNQFEGLTQHLLK--SIKGIEPKPFPRMSYDNAMKIYGNDKPDIRFGMTFC 296

Query: 301 NVTEHFVHSEFRVF-SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQPGLA 357
            + +      F VF S+ L V       A+P K     R   D + +W +    G  GL 
Sbjct: 297 ELNDLAQGKGFGVFDSQELVVG-----IAVP-KAAEMTRKEIDGLIDWVKRPQIGAKGLI 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++    D S   +    V K  N  +      R D   GD    ++GD     +  +  R
Sbjct: 351 WVKCNADGSHKSS----VDKFFNAEDLAQWAERCDAIAGDLILVLSGDANTTRTQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + + LG+     F   W+ DFP  EW+EE K+    H+PFT P+     L   D  ++
Sbjct: 407 MELGERLGLRKPEEFAPLWVTDFPLLEWDEESKRYHAMHHPFTSPKPDQLELLKTDPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA  YDLV NG EI  G IR H   +  Q F  +G SK   + +FG L  AFQ G PPHG
Sbjct: 467 KANAYDLVLNGNEIGGGSIRIHDQALQSQMFDLLGFSKAEAQAQFGFLMDAFQFGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           GIA G+DR+V +L G + +R+   FP + +  D+++ +P+ ++  QL EL L+ +   KK
Sbjct: 527 GIAFGLDRLVAILGGEETIRDFIAFPKNNSGRDIMIDAPAEINPSQLEELSLKSIVAKKK 586


>gi|212711940|ref|ZP_03320068.1| hypothetical protein PROVALCAL_03015 [Providencia alcalifaciens DSM
           30120]
 gi|212685462|gb|EEB44990.1| hypothetical protein PROVALCAL_03015 [Providencia alcalifaciens DSM
           30120]
          Length = 589

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/591 (38%), Positives = 337/591 (57%), Gaps = 11/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L ++  G  V L GWV+R R  GG+IF+D+RD  GI QV  +P+    FE A 
Sbjct: 2   RTNYCGQLNIAHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPERKDIFEKAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R     N ++ TG+IE+ A+ +++ + +E  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQKNKDMATGEIEIFAEGLDVFNKSE--PLPLDSNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 RRLKYRYLDLRRPEMSDRLRTRAKITSFVRNFMDKEGFMDVETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++R ++ +    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREVMERMIRNLWIDVKGVDL--GDFPIMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DIVKDVEFAVFAGPAN-DPKGRVAALKVPGGAVMTRKQIDEYGNFVGIYGAKGLAWMKIN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L++   E I  R    DGD   F AG            R  + +
Sbjct: 356 ERAKGLEGIQSPVAKFLSLEIIEQIIERTGAADGDIILFGAGAKNVVTDSMGALRLKVGR 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +  + + N ++  W++DFP +E N  E  +   H+PFT P+    E L  N   ++ A  
Sbjct: 416 DFELTDLNSWQPLWVIDFPMFEEN-GEGGLTAMHHPFTSPKDFTPEDLARNPEDAV-ANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H SE+    F  +GI++E    +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHRSEMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+VMLL G  N+R+V  FP +     L+  +PS  + + L EL + +V
Sbjct: 534 GLDRLVMLLTGTDNIRDVIAFPKTTAAACLMTNAPSHANPDSLAELAIAVV 584


>gi|255994166|ref|ZP_05427301.1| aspartate--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993834|gb|EEU03923.1| aspartate--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 583

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/598 (38%), Positives = 336/598 (56%), Gaps = 33/598 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           R    G++  + +   V L+GWV ++R  G I+FLD+RD  GI QV    N D   F+  
Sbjct: 6   RNAFAGEISDAHLDKEVSLNGWVSKIRKLGEIVFLDLRDRTGIVQVFFDKNIDENLFKKV 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             ++SE+V+ I G V  R  E  N ++ TG+ E+    + I S +E  P+ V  + +  E
Sbjct: 66  NELKSEYVIGISGKVRIRENE--NPDMKTGKYEVVGSDLVIYSASETPPIYVKDDDDVSE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR+ ++ K +  R  +    R       F E  TP+L   +PEGARD+LV
Sbjct: 124 DLRLKYRYLDLRKTSMQKILDIRHELTKLTRKYFDELGFREIETPMLIKPTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++GSFYALPQ+PQ YKQLLM SG DRY QIA CFRDED R+DR P EF Q+DME+S
Sbjct: 184 PSRVHKGSFYALPQSPQMYKQLLMVSGCDRYIQIAKCFRDEDLRADRQP-EFTQIDMELS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F + D+I+   E  L+ VF++   G  ++  F R  YD+A+ R+G+DKPD R  + +H++
Sbjct: 243 FTDADEIIAIEEGFLKEVFKKI-KGKEITTPFRRFSYDEAMERFGSDKPDTRFGMELHDI 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +   ++  F VF K  +V+ G  V  I  KGG    +R   D++ E A+  G  GLA+I 
Sbjct: 302 SSLVINKGFNVFDK--AVSEGGSVRGICVKGGSEKYSRKGIDKLTELAKDYGILGLAWIR 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG------DPLKFCSFAA 414
           +             + K  +  + E I    + + GD     +G      D L F     
Sbjct: 360 Y------TEPIKSSIGKFYSDSDLEEIARAFNAEKGDLILLASGINKVVFDSLGFL---- 409

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGND 473
             RNHIA+E  +I+ +  +  W+ DFP +   ++  K    H+PFT P+   +E LK  D
Sbjct: 410 --RNHIAKEQDLIDKDQIDLLWVTDFPMFSLEDDGHKA--MHHPFTSPKLNSLEDLK--D 463

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +KA  YD+V NG EI  G IR H  +V  + F  +G+ +E +E +FG L  AF  G+
Sbjct: 464 PKKLKADAYDIVLNGNEIGGGSIRIHDKDVQKEIFKILGMDEEEIEAKFGFLLNAFSYGV 523

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+ M+L GA ++++V  FP +Q     L  +P     EQL ELG++I
Sbjct: 524 PPHGGLAYGLDRLCMILAGASSIKDVIAFPKNQAAECPLSKAPDAADKEQLTELGIQI 581


>gi|189460795|ref|ZP_03009580.1| hypothetical protein BACCOP_01442 [Bacteroides coprocola DSM 17136]
 gi|189432514|gb|EDV01499.1| hypothetical protein BACCOP_01442 [Bacteroides coprocola DSM 17136]
          Length = 585

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 225/592 (38%), Positives = 346/592 (58%), Gaps = 16/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           +RT++CG+L ++D G  V L+GWV R R  GG+ F+D+RD YGITQ+V N D  +   E 
Sbjct: 2   FRTYTCGELRLADAGKNVTLAGWVQRTRKMGGMTFVDLRDRYGITQLVFNTDVNAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  RS++  NAN+ TG IE+   ++ +L+ A   P  +    +  
Sbjct: 62  ANHLGREFVIQVKGQVSERSSK--NANLPTGDIEIIVSELNVLNTALTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  + KN+  R R+   +R  + ++ F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRTAVRKNLELRHRMTMEVRRYLDSKGFLEVETPMLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI+   E + + +F+E   G  ++  F+R+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQEDIIQMFEGMAKHLFKEL-RGVELTEPFIRMPWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G     R   D++ E+ +         ++
Sbjct: 298 LMDILKGYGFSVFD-----NAAY-IGGICAEGAAHYTRKQLDQLTEFVKRPQIGAKGLVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419
            R++  GNV     V K  +    + ++     + GD    ++GD  +K      + R  
Sbjct: 352 ARVEADGNVK--SSVDKFYSQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   +  +++A
Sbjct: 410 MGNQLGLRDKNQFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTNPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDSQLQAKMFEILGFTPEKAQEQFGFLMNAFKFGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR V L  G  ++R+   FP + +  D+++ +P  +  +QL EL L++
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGYLDQKQLDELNLKV 581


>gi|298372345|ref|ZP_06982335.1| aspartate--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275249|gb|EFI16800.1| aspartate--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 583

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/595 (37%), Positives = 331/595 (55%), Gaps = 19/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           RTH+ G+L ++D G  V L+GWV + R  GG+ F+D+RD YGITQ+V N D     C E 
Sbjct: 3   RTHTNGELRLTDAGKTVTLTGWVQKNRKMGGMTFIDLRDRYGITQLVFNQDINPEIC-ES 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+   G V  RS +  N NI TG+IE+    + +L+ +   P  +  E +  
Sbjct: 62  ANRLGREYVIQATGTVAERSNK--NPNIPTGEIEIIVSSLRVLNPSAVPPFTIEDETDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR +YR+LDLRR+++  N+  R ++    R  + + +F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMQYRYLDLRRNSVRANLELRHKMAFETRRYLDSLHFLEVETPVLIKSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI+ T E +   +F+   N       F R+ + DA+R YG+DKPD R  +    
Sbjct: 239 SFVEQEDIIKTFEGLTVHLFKTIKNIEL--QPFPRMSFADAMRYYGSDKPDTRFEMRFVE 296

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      +    +  I AKG     R   D + ++ R         ++
Sbjct: 297 LMDTLKGYGFSVF------DDAEYIGGICAKGAASYTRKQLDELTDFVRRPQVGAKGLVY 350

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADARNH 419
            R++  GNV     V K       + ++ +   + GD    I+GD   K     ++ R  
Sbjct: 351 ARVEADGNVK--SSVDKFYTQDVLQKLKEKFAAEVGDLILIISGDNTSKAQKQLSELRLE 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +   LG+ + N +   W++DFP  EW+EE  +    H+PFT P+     L  ++   ++A
Sbjct: 409 MGSRLGLRDKNKYSCLWVVDFPLLEWDEETNRYYAMHHPFTSPKPEDIPLLDSEPGKVRA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S +  + F  +G + E  E +FG L  AF+ G PPHGGI
Sbjct: 469 NAYDMVINGVEVGGGSIRIHDSGLQKKMFQVLGFTNEQAEYQFGFLTNAFKYGAPPHGGI 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR V L  G  ++R+   FP +    D+++ +PS +   QL EL L IV+ 
Sbjct: 529 AYGLDRFVSLFAGLDSIRDCIAFPKNNQGRDVMIDAPSIIDKTQLDELALSIVQK 583


>gi|311894852|dbj|BAJ27260.1| putative aspartyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 600

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 234/608 (38%), Positives = 339/608 (55%), Gaps = 23/608 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G+ V L+GWV R R HGG+ F+D+RD  G  QVV        E    
Sbjct: 3   RTHDAGTLRAEQAGTTVTLAGWVARRRDHGGVAFIDLRDASGTVQVVVR----DLESVHG 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGEREYPE 122
           +RSE+ + + G V  R     N +I TG +E+  + IE+LS A  LP  V  +      E
Sbjct: 59  LRSEYCVKVVGEVRVRPEGNENPDIPTGAVEVVVESIEVLSEAAPLPFQVAEYEPGSVNE 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLRR+   + +  R+++ + +R  M   +F++  TP LT S+PEGARDFLV
Sbjct: 119 EVRLRYRYLDLRREGPARALRLRSKVNHIIRTVMEENDFLDIETPYLTRSTPEGARDFLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P R+  G +YALPQ+PQ +KQLLM +G +RY+QIA CFRDED R+DR P EF QLD+E S
Sbjct: 179 PVRLQPGHWYALPQSPQLFKQLLMVAGMERYYQIARCFRDEDFRADRQP-EFTQLDIEAS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+Q+D+L   E ++  ++++  +G  + +   R+ Y DA+ RYG+DKPD+R    + ++
Sbjct: 238 FVDQEDVLALGEKIVGRIWKDV-HGYEIPDPLPRLAYADAMARYGSDKPDVRFGQELTDL 296

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFW 361
           T +F  +EFRVF           V A+   GG    R   D   +WA+++G  GLAY+  
Sbjct: 297 TAYFQGTEFRVFQAPY-------VGAVVMPGGASQPRKQLDAWQDWAKARGARGLAYVLV 349

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E+G +   GPVAK+L+  +   +      + GD+ FF AG           AR  I 
Sbjct: 350 DA-ETGEL--RGPVAKNLSEEHLAGLAAAAGAKPGDAVFFAAGKKTASQELLGAARLEIG 406

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEK----KIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   +I+ + + F W++DFP +E  E++K         H+PFT P     +    D  S 
Sbjct: 407 RRCDLIDESQWAFLWVVDFPMFEPIEDDKGEFQGWHAVHHPFTAPTAESLATFDTDPGSA 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YDLV NG E+  G IR H  +V  +AF  +G+S+E    +FG L  AF  G PPHG
Sbjct: 467 LSNAYDLVLNGSELGGGSIRIHQRDVQKRAFDAIGLSEEEAAAQFGFLLDAFNYGPPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           GIA G+DR+V LL G   +R+V  FP +    D L G+P+T++  Q RE G+      K 
Sbjct: 527 GIALGLDRVVTLLGGYDTIRDVIAFPKTSTGGDPLTGAPTTITPAQRREAGVDAQPKAKD 586

Query: 598 ILKISVTT 605
             K  V +
Sbjct: 587 GAKDGVKS 594


>gi|15602848|ref|NP_245920.1| aspartyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|13431885|sp|P57895|SYD_PASMU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|12721309|gb|AAK03067.1| AspS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 588

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/593 (37%), Positives = 340/593 (57%), Gaps = 11/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH CG L   ++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRDNIGQEVTLSGWVHRRRDLGGLIFIDMRDREGIVQVCFDPVYQEALTTAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+ + I G V++R    IN N+ TG++E+ A+ + I + AE  PLP+   +   E 
Sbjct: 63  SLRNEFCIQIKGEVIARPDNQINKNMATGEVEVLAKSLSIYNSAE--PLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDEHGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++ E    +     F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMEKMVHGLWRETLGVDL--GKFPVMTFAEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF+   + +P   +  I    G    R   D   ++    G  GLA++   
Sbjct: 298 DLLKEVEFKVFNGPAN-DPNGRIAVIRVPNGTDITRKQIDEYTQFVGIYGAKGLAWLKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK L+    +A+  R+  Q+GD  FF   D  K  + A  A R  + 
Sbjct: 357 DLAAGMDGVQSPIAKFLSEAVLKALLERVQAQNGDILFF-GADNYKVTTDAMGALRLKLG 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++LG+     ++  W++DFP +E  ++E  +   H+PFT P+         D  S  A  
Sbjct: 416 RDLGLTKLEEWQPLWVIDFPMFE-RDDEGDLAAMHHPFTSPKDFSPEQLEADPTSAVANA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R    ++    F  +GI++     +FG L  A + G PPH G+A 
Sbjct: 475 YDMVINGYEVGGGSVRIFDPKMQQTVFRILGINEAEQREKFGFLLDALKFGTPPHAGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR+ MLL G  N+R+V  FP +     L+  +PS  + + L EL ++++++
Sbjct: 535 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPQALNELSVQVIKS 587


>gi|119964210|ref|YP_948028.1| aspartyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119951069|gb|ABM09980.1| aspartyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 626

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/607 (37%), Positives = 330/607 (54%), Gaps = 29/607 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    +G  V L+GWV R R HGG+ F+D+RD  G+ QVV   +    E+   
Sbjct: 32  RTHDLGSLRSEHIGQTVTLAGWVGRRRDHGGVAFVDLRDASGVAQVVVREE----EVFHG 87

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL + G V  R     N  + TG+IE+ A K+ IL+ +E LP  +    E  E  
Sbjct: 88  LRNEYVLQVTGTVNRRPEGNENPALATGEIEVMADKVVILNTSEPLPFQIDEHVEVGEEA 147

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R K+R+LDLRR    +N+  R+      R  +    ++E  TP LT S+PEGARDF+VP+
Sbjct: 148 RLKHRYLDLRRPGPARNMRLRSEANRVARELLHQRGYVEIETPTLTRSTPEGARDFVVPA 207

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLL   GF++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 208 RLAPGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 266

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E +++ +++       +     R+ Y DA+ +YG+DKPDLR  + +  +TE
Sbjct: 267 DQDDVIELGEAIVKALWQLID--VEIPTPIRRMTYLDAMAKYGSDKPDLRFGVELTELTE 324

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
            F  + F VF           V A+   GG    R   D   E+A+ +G  GLAY+ ++ 
Sbjct: 325 FFKDTNFGVFKAPY-------VGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVLFK- 376

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +A  GPVAK+L     E +   +  + GD  FF AG+     +    AR  I   
Sbjct: 377 -EDGELA--GPVAKNLTDAEREGLADAVGAKPGDCIFFAAGEKSAARALLGAARVEIGHR 433

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGND 473
            G+I+   + F WI+D P +E                +    H+ FT P+         D
Sbjct: 434 TGLIDPKDWAFVWIVDAPMFEPAAAAVASGDVAVGAGQWTAVHHAFTSPKPEFLDTFDKD 493

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  ++ YD+VCNG EI  G IR H  EV  + F  +G+ KE  E +FG L   F+ G 
Sbjct: 494 PESALSYAYDIVCNGNEIGGGSIRIHEREVQERVFQLMGLDKEDAETKFGFLLEGFKYGA 553

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGG+A G DR+V LL G +++R+V  FP S N  D L  +P+ ++ +Q +E G+    
Sbjct: 554 PPHGGMALGWDRVVALLAGVESIRDVIAFPKSGNGYDPLTAAPAPITPQQRKEAGVDFKP 613

Query: 594 NPKKILK 600
             K   K
Sbjct: 614 ESKPAAK 620


>gi|15802279|ref|NP_288303.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|12515925|gb|AAG56856.1|AE005409_1 aspartate tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
          Length = 590

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/592 (38%), Positives = 333/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K R+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKXRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLRSVEFAVFAGPAN-DPKGRVAALCVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +           R  + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL + +V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIXVVKK 586


>gi|15806364|ref|NP_295070.1| aspartyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|24212427|sp|Q9RUN7|SYD_DEIRA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|6459100|gb|AAF10918.1|AE001981_3 aspartyl-tRNA synthetase, discriminating [Deinococcus radiodurans
           R1]
          Length = 577

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 225/573 (39%), Positives = 319/573 (55%), Gaps = 20/573 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L GWV R R  GG+IFL++RD  G  QV   PDS  F  A  +R+E+V  I+G    R
Sbjct: 20  VTLQGWVSRRRDLGGLIFLELRDRSGTVQVQVEPDSPAFAEADRLRAEYVAEIEGTFQPR 79

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                   +     E+ A ++++L+ A+  P  +       E IR KYR+LDLRR  + +
Sbjct: 80  PESQRKGGL--ADFEVIASRVKVLNAAKTPPFELDKGESVAEDIRLKYRYLDLRRPEMQR 137

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
            ++ R++ + ++   + AE FI+  TP+LT S+PEGARDFLVPSR+N G FYALPQ+PQ 
Sbjct: 138 ALMLRSKAVTAVTEFLDAEGFIQVETPMLTKSTPEGARDFLVPSRLNPGEFYALPQSPQL 197

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +KQLLM +GFDRY+Q+A CFRDED R+DR P +F QLDMEMSFVEQDD+L   E +L  V
Sbjct: 198 FKQLLMIAGFDRYYQLARCFRDEDLRADRQP-DFTQLDMEMSFVEQDDVLEVQERLLAHV 256

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
           F    +   +   F R+ Y DA+ RYG+DKPDLR      +VT  F   EF  F+     
Sbjct: 257 FRRVLD-VELPLPFPRMSYFDAMDRYGSDKPDLRFDSAFTDVTGLFRGGEFAAFASA--- 312

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
            P  +V   P       R   D +   A+  G  GLA++  R D  G   G   ++K + 
Sbjct: 313 -PSVKVLVAPEL----TRKQIDELERVAKQNGAGGLAWL--RRDGEGFTGG---ISKFVG 362

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC-FEFCWIMD 439
            +  + I  +  +  G +  F AG+  K  +     R  +     +      F   W++D
Sbjct: 363 GIAPQLIE-QTGVAQGGTLLFAAGEWKKAVTALGAVRLALRDLFDLAAGGPQFHVSWVVD 421

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL-SIKAFQYDLVCNGFEIASGGIRN 498
           FP  E++E+ +   + H+PFT P  G  +L G +    ++A  YDLV NGFEI  G +R 
Sbjct: 422 FPQLEFDEDSQSWTYMHHPFTAPHPGDVALFGTERQGEMRAQAYDLVMNGFEIGGGSVRI 481

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
           H  EV  + F  +G S+E    +FG    A + G PPHGGIA G DR++ML+ GA ++RE
Sbjct: 482 HDPEVQAKMFQAIGFSEEAAREKFGFFLDALEYGTPPHGGIAWGFDRLLMLMSGAGSIRE 541

Query: 559 VSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           V  FP +    DL+  +PS V   QL E+G+++
Sbjct: 542 VIAFPKNNRGADLMAQAPSPVEDAQLAEVGVQV 574


>gi|145634684|ref|ZP_01790393.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145268229|gb|EDK08224.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 588

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 222/591 (37%), Positives = 335/591 (56%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+ + I G V++R    IN N+ TG++E+ A+++ + + ++ LPL     +   E 
Sbjct: 63  SLRNEFCIQIKGEVIARPDNQINKNMATGEVEVLAKELRVYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLQTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++            F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    +A+  R++ Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+   + ++  W++DFP +E  +EE  +   H+PFT P+         D  S  A  Y
Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+
Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586


>gi|322515237|ref|ZP_08068235.1| aspartate--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322118742|gb|EFX90948.1| aspartate--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 591

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/596 (37%), Positives = 345/596 (57%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S VG  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+IA 
Sbjct: 3   RSHYCGALNRSHVGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKIAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE  + I G V++R    IN ++ TG+IE+  + + + + +E LPL     +   E 
Sbjct: 63  SLRSEACVQIQGEVIARDESQINKDMATGEIEVLVKNVIVYNNSEVLPLDF--NQSNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHNGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   MEN++ G++      N     F  + + + ++R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAEEVRELMENMIHGLW--LDRLNVDLGKFPMMTWQEVMQRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  +   G   V  +P  G    R   D   ++    G  GLA+    
Sbjct: 298 DILKDVEFKVFNEPANSADGRVTVLRVP-NGATLTRKQIDEYTQFVGIYGAKGLAWAKIN 356

Query: 363 LDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            D + ++ G+  PVAK LN    +A+  R +   GD  FF A             R  + 
Sbjct: 357 -DVNASMEGIQSPVAKFLNEDIFKALIERTNATSGDILFFGADKWQVVTDSMGALRLKVG 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++L + + + ++  W++DFP +E  ++E  +   H+PFT P+    E L  N + ++ A 
Sbjct: 416 RDLALTDLSAWKPLWVIDFPMFE-KDDEGNLSAMHHPFTSPKDLTPEELAANPVNAV-AN 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++    FS +GI++E  + +F  L  A + G PPH G+A
Sbjct: 474 AYDMVINGYEVGGGSVRIYDPKMQQTVFSILGINEEEQQEKFSFLLDALKFGTPPHAGLA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L ELG+ +V+  K
Sbjct: 534 FGLDRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELGIAVVKKEK 589


>gi|238898055|ref|YP_002923736.1| aspartate tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259511863|sp|C4K4U5|SYD_HAMD5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229465814|gb|ACQ67588.1| aspartate tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 589

 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/595 (37%), Positives = 339/595 (56%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG+L +S +   V L GWV R R  GG+IF+D+RD  GI QV  +P+  A FE A 
Sbjct: 2   RTHCCGELSLSVLNQTVCLCGWVDRRRDLGGLIFIDMRDFSGIVQVFFDPEQQALFEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+ + I G V +R    IN  ++TG +E+ ++ + I++ +E  PLP+   +   E 
Sbjct: 62  SLRNEFCIQITGKVKARPHHQINQKMLTGAVEVFSENLTIINCSE--PLPLDRNQNNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  +   +  R++I + +R  +  E F++  TP LT ++PEGARD+LVP
Sbjct: 120 QRLRYRYLDLRRPEMLARLKTRSKITSFVRQFLDKEGFLDVETPTLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV +G FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVQKGKFYALPQSPQLFKQLLMVSGVDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +    E ++R ++ +  N +     F  + +++AIRR+G+DKPDLRNP+ + ++ 
Sbjct: 239 MTAQQVRTVTEKLIRQLWLQIKNIHL--GAFPVMTFEEAIRRFGSDKPDLRNPLELVDLD 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + +F+VFS+  +      V      G   +R   D    +       GLA++  + 
Sbjct: 297 DVLKNVDFKVFSEPANDAHSRVVGIRVPNGADISRKQIDEYTAFVHIYAARGLAWLKIKQ 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQ 422
            ++G      P+AK L+    E I  R   +DGD  FF   D  K  + A  A R  +  
Sbjct: 357 ADAGLEGIQSPIAKFLSPEILERILKRTQAKDGDLLFF-GADKKKIVTDAMGALRLKLGL 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +  +   + +   W++DFP +  N+ E  +   H+PFT P+    S    +  +  A  Y
Sbjct: 416 DRQLTQLDRWAPLWVIDFPMFS-NDTETGLTAMHHPFTSPKNTNLSEFAANPETALANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H S++  Q FS +GI     + +FG L  A + G PPH GIA G
Sbjct: 475 DMVINGYEVGGGSVRIHHSDLQQQVFSLIGIEANQQKQQFGFLLEALKYGAPPHAGIAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+V  FP +     L+  +PS  S   L+EL + +V+  KK
Sbjct: 535 LDRLVMLLTGTNNIRDVIAFPKTTAAACLMTDAPSFASDSSLQELFIDVVKKEKK 589


>gi|308177518|ref|YP_003916924.1| aspartate--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744981|emb|CBT75953.1| aspartate--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 595

 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/604 (37%), Positives = 329/604 (54%), Gaps = 29/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    +G  V L+GWV R R HGG+ FLD+RD  G+ QVV   +    E    
Sbjct: 3   RTHQLGVLNAEHIGQQVTLTGWVARRRDHGGVAFLDLRDASGVAQVVVRDE----EDFHP 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL I G V  R     N N+ TGQIE+ A+ + +L+ A  LP  V    E  E  
Sbjct: 59  LRNEFVLQILGTVERRPEGNENPNLPTGQIEVIAETVTVLNTAAPLPFQVDEHVEVGEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR T  +NI  R+      R  +  + +IE  TP LT S+PEGARDF+VP+
Sbjct: 119 RLRHRYLDLRRPTPARNIRLRSEANRVARNLLHDQGYIEIETPTLTRSTPEGARDFVVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLL   GF++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 179 RLTPGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           E+DDI+   E ++  ++        V     R+ Y +A+ +YG+DKPDLR  + +  +TE
Sbjct: 238 EEDDIIELGEKLVTELWNLID--VQVPTPIRRMAYSEAMAKYGSDKPDLRFGLELTEMTE 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRL 363
           +F ++ F+VF           V A+   GG    R   D   E+A+ +G  GLAY+   +
Sbjct: 296 YFANTSFKVFQSEY-------VGAVVMPGGASQPRRTLDAWQEFAKQRGAKGLAYVL--I 346

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G +A  GPVAK+L+      +        GD  FF AG   +  +     R  I   
Sbjct: 347 KEDGELA--GPVAKNLSDEEKAGLAAATGASAGDCIFFSAGKKNESRALLGSVRVEIGHR 404

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEE-KKIDFA---------HNPFTMPQGGMESLKGND 473
            G+I    + F WI+D P +E   +     D A         H+ FT P+         D
Sbjct: 405 TGLIKEGDWAFVWIVDAPMFEAASDAVASGDVAVGAGAWTAVHHAFTSPKPEFMDTFDTD 464

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  ++ YD+VCNG EI  G IR H  +V  + F  +G+++E  + +FG L   F+ G 
Sbjct: 465 PASALSYAYDIVCNGNEIGGGSIRIHQRDVQERVFKLMGVTQEQADTQFGFLLEGFKYGA 524

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G DR++ LL  ++++R+V  FP +    D L  +P+ ++ +Q +E G+    
Sbjct: 525 PPHGGIALGWDRVLQLLTNSESIRDVIAFPKTGGGFDPLTSAPAPITPQQRKEAGIDFKP 584

Query: 594 NPKK 597
             KK
Sbjct: 585 EKKK 588


>gi|254362358|ref|ZP_04978467.1| aspartate--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153093947|gb|EDN74863.1| aspartate--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 588

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 223/589 (37%), Positives = 336/589 (57%), Gaps = 7/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S +G  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+ A 
Sbjct: 3   RSHYCGALNRSHLGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEALFKQAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE  + I G V++R    IN  + TG+IE+  + + + + AE LPL  F +    E 
Sbjct: 63  ALRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNLVVYNNAEVLPLD-FNQNNTEEQ 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 122 -RLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   ME ++ G+++E    +     F  + +++A+ R+G+DKPDLRNP+ M +V 
Sbjct: 240 MTAEEVRALMEAMIHGLWKETLGVDL--GKFPMMTWNEAMTRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G  V      G    R   D   ++    G  GLA++    
Sbjct: 298 DILKSVDFKVFSGPANDPKGRVVALRVPNGAALTRKNIDDYTQFVGIYGAKGLAWLKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN    +A+  RL++Q  D  FF A +     +     R  +  +
Sbjct: 358 MNTGLEGIQSPVAKFLNEEVLKALVKRLNLQKDDIVFFGADNWHVATNAIGALRLKVGND 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ +   ++  W++DFP +E  ++E  +   H+PFT P+         D  +  A  YD
Sbjct: 418 LGLTDTTAWKPLWVIDFPMFE-RDDEGNLSAMHHPFTSPKELSPEELVQDPENAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    FS +GI++E  + +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFSQQMQQTVFSILGINEEEQKEKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           DR+ ML+ G  N+R+V  FP +     L+  +PS  + + L EL +R +
Sbjct: 537 DRLTMLITGTDNIRDVIAFPKTTAAACLMTEAPSYANPKALEELAIRTI 585


>gi|325297825|ref|YP_004257742.1| aspartyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324317378|gb|ADY35269.1| aspartyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 585

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 344/592 (58%), Gaps = 16/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           +R+H+CG+L ++D G  V L+GWV R R  GG+ F+D+RD YGITQ+V N +  +   E 
Sbjct: 2   FRSHTCGELRLADAGKNVTLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNTEVNAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+   G V  RS++  NANI TG IE+   ++ IL+ A+  P  +    +  
Sbjct: 62  ANHLGREYVIQAKGTVSERSSK--NANIPTGDIEIIVSELNILNAAQTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  + KN+  R R+   +R  + ++ F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRTAVRKNLELRHRMTMEVRRYLDSKGFLEVETPMLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI+   E + + +F+E   G  ++  F R+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQEDIIQMFEGMAKHLFKEL-RGVELAGPFQRMPWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G     R   D++ E+ +         ++
Sbjct: 298 LMDILKGYGFSVFD-----NAAY-IGGICAEGAAHYTRKQLDQLTEFVKRPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419
            R++  GNV     V K  +    + ++     + GD    ++GD  +K      + R  
Sbjct: 352 ARVEADGNVK--SSVDKFYSQEVLQQVKEAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + + F   W++DFP +EW+EEE ++   H+PFT P+     L   D  S++A
Sbjct: 410 MGNQLGLRDKDKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDPASVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S +  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDSALQEKMFEILGFTPEKAQEQFGFLMNAFKFGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR V L  G  ++R+   FP + +  D+++ +P  +  +QL EL L++
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGFLDQKQLDELQLKV 581


>gi|110805810|ref|YP_689330.1| aspartyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|123048148|sp|Q0T3U0|SYD_SHIF8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110615358|gb|ABF04025.1| aspartate tRNA synthetase [Shigella flexneri 5 str. 8401]
          Length = 590

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 225/592 (38%), Positives = 334/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK L+    EAI  R   QDGD  FF A +              + +
Sbjct: 356 ERAKGLEGINSPVAKFLSAEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586


>gi|148977432|ref|ZP_01814032.1| aspartyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145963384|gb|EDK28649.1| aspartyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 593

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 230/591 (38%), Positives = 333/591 (56%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG+L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD    F IA 
Sbjct: 2   RTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDIFPIAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ +   G V  R    +N ++ TG++EL A  +EI++ +E LPL     +   E 
Sbjct: 62  QLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELYATGLEIINRSEALPLDF--NQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R KYR++DLRR  +   I  R R  + +R R + EN F++  TP+LT ++PEGARD+LV
Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVR-RFLDENLFLDIETPVLTKATPEGARDYLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E S
Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+   ++ N  E ++  +++E  +       F  + + +AIRR+G+DKPDLRNP+ + +V
Sbjct: 238 FMSSQEVRNITEKLVHDMWKELLDVEL--GQFPVMPFSEAIRRFGSDKPDLRNPLELVDV 295

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VFS   +   G  V  I   GG    R   D   E+    G  GLA++  
Sbjct: 296 ADLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAKLTRKQIDGYAEYVNIYGAKGLAWMKV 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
               +G      PVAK L+      I  R + + GD   F A             R  + 
Sbjct: 355 NDRAAGMEGIQSPVAKFLSEDVINGILDRTEAESGDIILFGADKAGIVAEAMGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
            +L + + + +   W++DFP +E  + E  +   H+PFT P G   E LK N   +  + 
Sbjct: 415 TDLELTDTSAWAPLWVVDFPMFE-EDGEGNLHAMHHPFTSPLGVTAEELKANP-AAANSD 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI ++  + +FG L  A Q G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHNAEMQTAVFGILGIEEKEQQEKFGFLLDALQYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+ MLL G +N+R+V  FP +     LL  +PS  +   L EL + +
Sbjct: 533 FGLDRLAMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAV 583


>gi|320105587|ref|YP_004181177.1| aspartyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319924108|gb|ADV81183.1| aspartyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 604

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 233/611 (38%), Positives = 337/611 (55%), Gaps = 42/611 (6%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS--VR 66
           CGDL  +  G  V L GWV+R R HG ++FLD+RD  GITQVV +   +   +AK+   R
Sbjct: 2   CGDLRSAHAGQSVILMGWVNRRRDHGDLVFLDLRDRSGITQVVVDKSESTEALAKAEAAR 61

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E+V+   G V  R A   N N+ TG IE+   ++ +LS A+  P     +    E +R 
Sbjct: 62  PEFVVAAIGTVRQRIAGLENPNMPTGDIEVVVSELLLLSDAKTPPFSPAEDAIVNEELRL 121

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           +YR+LDLRR  +  N + R ++  ++R ++ +E F+E  TP+LT S+PEGARD+LVPSRV
Sbjct: 122 QYRYLDLRRPEMQANFLMRHKVAQAIRGQLSSEGFLEIETPMLTRSTPEGARDYLVPSRV 181

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           + G+FYALPQ+PQ +KQ+LM  GFDRYFQIA CFRDED R+DR P EF Q+D+E+SF  Q
Sbjct: 182 HPGTFYALPQSPQIFKQILMVGGFDRYFQIARCFRDEDLRADRQP-EFTQIDLEISFPTQ 240

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           + +    E  L   F   +   T+   F R+ YD AI +YG DKPD+R P  M  +TE  
Sbjct: 241 ETVFGVAERFLTAAFA--AANVTIPTPFPRMTYDQAITKYGIDKPDMRLP-HMAELTE-V 296

Query: 307 VHSEFRVFSKILSVNPGYEVWA--IPAKG---GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +  E R   + L + P   V+   IP  G   G   ++    +  +    G   L     
Sbjct: 297 LTPELR---ESLRIEPALPVFGFVIPNVGELSGTARKSLLSEIRAFFGDSGLDALDITRL 353

Query: 362 RLDES--------GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----------IA 403
           R  E+        G+      +A + N   T  + V +  + G    +          I 
Sbjct: 354 RTSEAFVPLAEEIGSHLNATTIAFNGNSFTTNDLAVVITPKLGTPALWNFDRQWIPKRIG 413

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463
              ++     AD ++ +  + G    + + F W+ DFP YE+NEE+K  D AH+PFT P 
Sbjct: 414 ALRIELAKKFAD-KHKLFDKTG--TADDYRFLWVTDFPMYEFNEEKKTWDAAHHPFTSPH 470

Query: 464 GGMESLKG----NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
              + +K     ND  S++A  YD+V NG E+ SG IR H  +V  + F ++G++ E   
Sbjct: 471 E--DDIKSGALYNDKGSVRALAYDVVLNGLELGSGSIRIHRKDVQSEIFRSLGMTDEEAR 528

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
            RFG    A + G PPHGGIA G+DRIVMLL GA ++REV  FP +    DL++ +PS  
Sbjct: 529 ERFGFFLEALEYGTPPHGGIALGLDRIVMLLAGASSLREVIAFPKTAKAIDLMVQAPSEP 588

Query: 580 SVEQLRELGLR 590
           + +Q+R+L L+
Sbjct: 589 TEQQMRDLHLK 599


>gi|255691887|ref|ZP_05415562.1| aspartate--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260622440|gb|EEX45311.1| aspartate--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 585

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/590 (38%), Positives = 338/590 (57%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           +RTH+CG+L +SD    V LSGWV R R  GG+ F+D+RD YGITQ+V N +  +   E 
Sbjct: 2   FRTHTCGELRISDANKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ I G V  R ++  NANI TG IE+   ++ +L+ A   P  +    +  
Sbjct: 62  ANKLGREFVIQITGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR+ +  N+  R ++   +R  + +  FIE  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI+ T E + + +F+    G  ++  F R+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQEDIITTFEGMAKHLFKTL-RGVELTEPFPRMAWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y +  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-IGGICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            R++  G V     V K       + ++     + GD    ++G D +K      + R  
Sbjct: 352 ARIEADGTVK--SSVDKFYTQEVLQKMKEAFGAKPGDLILILSGDDAMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  +++A
Sbjct: 410 MGSQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H +++  + F  +G + E  E +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAEAQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQTQLDELNL 579


>gi|261496078|ref|ZP_05992488.1| aspartate--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261308328|gb|EEY09621.1| aspartate--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
          Length = 588

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 222/589 (37%), Positives = 336/589 (57%), Gaps = 7/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S +G  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+ A 
Sbjct: 3   RSHYCGALNRSHLGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEALFKQAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE  + I G V++R    IN  + TG+IE+  + + + + AE LPL  F +    E 
Sbjct: 63  ALRSETCVQIQGEVIARDESQINKEMATGEIEVLVKNLVVYNNAEVLPLD-FNQNNTEEQ 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 122 -RLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   ME ++ G++++    +     F  + +++A+ R+G+DKPDLRNP+ M +V 
Sbjct: 240 MTAEEVRALMEAMIHGLWKKTLGVDL--GKFPMMTWNEAMTRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G  V      G    R   D   ++    G  GLA++    
Sbjct: 298 DILKSVDFKVFSGPANDPKGRVVALRVPNGAALTRKNIDDYTQFVGIYGAKGLAWLKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN    +A+  RL++Q  D  FF A +     +     R  +  +
Sbjct: 358 MNTGLEGIQSPVAKFLNAEVLKALVKRLNLQKDDIVFFGADNWHVATNAIGALRLKVGND 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ +   ++  W++DFP +E  ++E  +   H+PFT P+         D  +  A  YD
Sbjct: 418 LGLTDTTAWKPLWVIDFPMFE-RDDEGNLSAMHHPFTSPKELSPEELVQDPENAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    FS +GI++E  + +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFSQQMQQTVFSILGINEEEQKEKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           DR+ ML+ G  N+R+V  FP +     L+  +PS  + + L EL +R +
Sbjct: 537 DRLTMLITGTDNIRDVIAFPKTTAAACLMTEAPSYANPKALEELAIRTI 585


>gi|291617759|ref|YP_003520501.1| AspS [Pantoea ananatis LMG 20103]
 gi|291152789|gb|ADD77373.1| AspS [Pantoea ananatis LMG 20103]
          Length = 592

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 226/595 (37%), Positives = 335/595 (56%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  + D    F++A 
Sbjct: 2   RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIAQVFFDADHQDAFQLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N+++ TG +E+ A  + I++ AE  PLP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARDEKNRNSDMATGDVEVFAHALNIINRAE--PLPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMVERLKTRAKITSFVRRFMDDAGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R +++     +     F ++ + +A+ RYG+DKPDLRN + + +V 
Sbjct: 239 LTAPQVREIMERMIRELWQSVKGVDL--GEFPQMTFAEAMHRYGSDKPDLRNSMELVDVG 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G  V A+   GG   +R   D   ++    G  GLA++   
Sbjct: 297 DLLKTVEFQVFSGPANDEKG-RVAALRVPGGAQLSRKQIDEYGKFVEIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK LN    E +  R   QDGD  FF A D  K  + A  A R  + 
Sbjct: 356 ERAKGLEGVQSPVAKFLNADIVETLLSRTSAQDGDIIFFGA-DRAKVVADALGALRLKVG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L I +   +   W++DFP +E  ++E  +   H+PFT P+         D     A  
Sbjct: 415 RDLQITDDKAWAPLWVVDFPMFE-EDDEGGLAAMHHPFTAPKEMSAEQLAADPTQAVANA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H   +    FS +GI +     +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHNGNMQQTVFSILGIEEHEQREKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+ MLL G  N+R+V  FP +     ++  +PS  +   L ELG+++V+  K
Sbjct: 534 GLDRLTMLLTGTDNIRDVIAFPKTTAAACMMTEAPSEANPASLLELGIQVVKKDK 588


>gi|261494081|ref|ZP_05990584.1| aspartate--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261310247|gb|EEY11447.1| aspartate--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 588

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 222/589 (37%), Positives = 336/589 (57%), Gaps = 7/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S +G  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+ A 
Sbjct: 3   RSHYCGALNRSHLGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEALFKQAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE  + I G V++R    IN  + TG+IE+  + + + + AE LPL  F +    E 
Sbjct: 63  ALRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNLVVYNNAEVLPLD-FNQNNTEEQ 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 122 -RLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   ME ++ G++++    +     F  + +++A+ R+G+DKPDLRNP+ M +V 
Sbjct: 240 MTAEEVRALMEAMIHGLWKKTLGVDL--GKFPMMTWNEAMTRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G  V      G    R   D   ++    G  GLA++    
Sbjct: 298 DILKSVDFKVFSGPANDPKGRVVALRVPNGAALTRKNIDDYTQFVGIYGAKGLAWLKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN    +A+  RL++Q  D  FF A +     +     R  +  +
Sbjct: 358 MNTGLEGIQSPVAKFLNAEVLKALVKRLNLQKDDIVFFGADNWHVATNAIGALRLKVGND 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ +   ++  W++DFP +E  ++E  +   H+PFT P+         D  +  A  YD
Sbjct: 418 LGLTDTTAWKPLWVIDFPMFE-RDDEGNLSAMHHPFTSPKELSPEELVQDPENAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    FS +GI++E  + +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFSQQMQQTVFSILGINEEEQKEKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           DR+ ML+ G  N+R+V  FP +     L+  +PS  + + L EL +R +
Sbjct: 537 DRLTMLITGTDNIRDVIAFPKTTAAACLMTEAPSYANPKALEELAIRTI 585


>gi|260061048|ref|YP_003194128.1| aspartyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785180|gb|EAR16349.1| aspartyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 583

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 222/597 (37%), Positives = 339/597 (56%), Gaps = 21/597 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           YR+H+CG+L    +G  V L+GW  +VR  G ++++D+RD YGITQ+V + +   +A  +
Sbjct: 2   YRSHTCGELREEHIGREVTLAGWAGKVRDKGFVVWIDLRDRYGITQLVFDQERTPAALLD 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+    E+VL + G V+ R+++  N  + TG IE+  +++ +L+ AE  P  +  + + 
Sbjct: 62  QARETGREYVLQVKGNVIERASK--NPKLPTGGIEVLVEEMTVLNPAETPPFTIEDQTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LD+RR+ +   ++ R  +   +R  +  + FIE  TP L  S+PEGARDF
Sbjct: 120 GDELRMKYRYLDIRRNPVKNKLMFRHTVTMEVRKYLSDQGFIEVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNAGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DIL   E + R + +  +  +T    F R+ YD+AIRRYG+DKPD+R  +   
Sbjct: 239 MAFVEQEDILRAFEGLTRHLLKAVNGVDT--GEFPRMTYDEAIRRYGSDKPDIRFGMEFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357
            + E   H +F VF      N    V  I   G     R   D + +W +    G  G+ 
Sbjct: 297 ELNEVARHRDFNVF------NQAELVVGIAVPGAASYTRKEIDALVDWVKRPQVGAKGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  + ++ G+      V K  +  +            GD    ++GD     S  +  R
Sbjct: 351 YV--KCNDDGSFK--SSVDKFYSQEDLARWAEATGATPGDLICVLSGDAGTTRSQLSMLR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A  LG+ N   F   W+ DFP  E++EE  +    H+PFT P+ G   L  +D  ++
Sbjct: 407 MELAGRLGLRNPKEFAPLWVTDFPLLEFDEESGRYHAMHHPFTAPKPGQLELLDSDPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG EI  G IR H  +     F ++G ++     +FG L  AFQ G PPHG
Sbjct: 467 RANAYDLVLNGNEIGGGSIRIHDKKTQAVMFRHLGFTEAEARAQFGFLMDAFQYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           GIA G+DR+V +L G +++R+   FP + +  D+++ +P+ +  EQLREL L ++E+
Sbjct: 527 GIAFGLDRLVAILGGQESIRDYIAFPKNNSGRDVMIDAPAPLDAEQLRELHLGLLES 583


>gi|117618858|ref|YP_856059.1| aspartyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117560265|gb|ABK37213.1| aspartyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 668

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 227/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +  +  G  + L GWVHR R  GG+IF+D+RD  GI QV  +PD    F +A 
Sbjct: 82  RSIYCGQVNEAHAGQTITLCGWVHRRRDLGGLIFIDMRDREGIVQVFFDPDKPDAFALAS 141

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R E+ + + G+V +R     N+++ TG IE+ A ++ I++ AE  PLP+   +   E 
Sbjct: 142 ELRGEFCIQVSGVVRTRPDSQRNSDMATGAIEVFAHELTIINRAE--PLPLDFNQVNSEE 199

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +  KYR+LDLRR  + K +  R +    +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 200 VSLKYRYLDLRRPEMAKYLKTRAKASAFVRRFMDEHGFLDIETPMLTKATPEGARDYLVP 259

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 260 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 318

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++    N +    +F  + +D+A+RRYG+DKPDLR P+ + +V 
Sbjct: 319 MTAPQVREIMEEMIRKLWLHILNVDL--GDFPIMTFDEAMRRYGSDKPDLRLPMELVDVA 376

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D   ++    G  GLA++  +
Sbjct: 377 DLLTAVEFAVFAGPAN-DPKGRVAALKVPGGAELSRKQIDEYTKFVGIYGAKGLAWM--K 433

Query: 363 LDESGN-VAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           ++E+ N + G+  PVAK L+      I  R    DGD  FF A      C      R  +
Sbjct: 434 VNEAANGIEGVQSPVAKFLSDAIVREILARTGAADGDIIFFGADSKKVVCDAMGALRLKV 493

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
            ++LG++  N ++  W++DFP +E  + E  +   H+PFT P G   E LK N  +   A
Sbjct: 494 GRDLGLLE-NSWKPLWVIDFPMFE-EDGEGGLAAMHHPFTAPSGLSPEQLKANP-VGAYA 550

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H SE+    F  +GI+      +FG L  A + G PPH G+
Sbjct: 551 NAYDMVINGYEVGGGSVRIHNSEMQATVFDILGITPAEQRLKFGFLLDALKYGTPPHAGL 610

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR+ MLL G +N+R+V  FP +     L+  +PS  +  QL EL +
Sbjct: 611 AFGLDRLSMLLTGTENIRDVIAFPKTTAAACLMTDAPSFANAAQLGELAI 660


>gi|227431711|ref|ZP_03913741.1| aspartyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352535|gb|EEJ42731.1| aspartyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 591

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 221/593 (37%), Positives = 335/593 (56%), Gaps = 10/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+  G +  + +   V L+GWV + R  G +IF+D+RD  GI Q+  N  +A    +A+
Sbjct: 3   RTNYAGLIDETYLNQTVTLTGWVQKRRDFGDLIFVDLRDREGIVQLTFNATNADALAVAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL I G V+ R+   IN  I +G IE+   + EILS ++  P  +  +    E 
Sbjct: 63  KVRSEYVLKITGHVIERAENQINTKIKSGTIEVDVTEAEILSTSKTPPFYIEDDVNANEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           ++ +YR+LDLRR  + KN+  R++I++S    M   +FI   TP+L  S+PEGARD+LVP
Sbjct: 123 LKLQYRYLDLRRPEMQKNLRIRSKIMSSAMHFMDTHDFINIETPVLAKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV  GSFYALPQ+PQ +KQLLM +GFDRYFQIA  FRDED R DR P EF Q+D+E SF
Sbjct: 183 SRVFPGSFYALPQSPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQP-EFTQMDVETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D+I   +   ++ +  +  + +  +     + + +++ R+GTDKPDLR    + +++
Sbjct: 242 MTADEIRELVNAWVKAMMHDVVDFDLDTAEIPTLTWQESMDRFGTDKPDLRIAYEIKDLS 301

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E   +SEF VF+  +      +  A+P      +R   D++ ++    G  GLA++  ++
Sbjct: 302 ETVKNSEFGVFANAIKGGGVVKALAVPGGADHYSRKDIDKLTKYIERFGAKGLAWM--KV 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G     GP+AK  +     A+    D Q GD   F AG      +     R   A+ 
Sbjct: 360 AQEGLT---GPIAKFFDDEAQAALIDSADAQVGDLLLFGAGRADVVSATLDYLRRETAKA 416

Query: 424 LGIIN-CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLK-GNDLLSIKAF 480
           L +I+  N + F WI+D+P +E++E+  +   AH+PFTMP +  +  L  G D     A 
Sbjct: 417 LDLIDQTNSWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPNEEDLHYLNDGEDPHKAHAQ 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+ SG IR H  ++  +    +G + E     FG L    + G PP GGIA
Sbjct: 477 SYDLVLNGYELGSGSIRIHRMDIQEKMLKALGFTPEKAHEAFGFLLEGMEYGFPPMGGIA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR+ MLL G +N+REV  FP +    + +  +P+ V  +QL ELGL + E
Sbjct: 537 LGLDRLAMLLAGQENIREVIAFPKNSRATEPMTEAPTRVEGKQLNELGLFVPE 589


>gi|326692514|ref|ZP_08229519.1| aspartyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 589

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 223/591 (37%), Positives = 333/591 (56%), Gaps = 16/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT   G +    +G  V LSGWV + R  G +IF+D+RD  GI Q+  N    A   +A+
Sbjct: 3   RTTYAGLIDEKYLGQTVTLSGWVQKRRDFGDLIFVDLRDREGIVQLTFNATHPAALAVAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+V+ + G V+ R A  +N  I +G++E+   + EIL+ ++  P  +       E 
Sbjct: 63  AMRNEYVIAVTGTVIDREASQVNNKIHSGKVEIDVTEAEILATSKTPPFYIEDGVNANEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           ++ +YR+LDLRR  + KN+  R++I++S    M   +FI   TPIL  S+PEGARD+LVP
Sbjct: 123 LKLQYRYLDLRRPEMQKNLRIRSKIMSSAMKFMDDNDFINIETPILAKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+  GSFYALPQ+PQ +KQLLM +GFDRYFQIA  FRDED R DR P EF Q+D+E SF
Sbjct: 183 SRIFPGSFYALPQSPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQP-EFTQMDLETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D+I   +   ++ +  +    +  +     + +++A+ R+GTDKPDLR P  + +++
Sbjct: 242 MSADEIRALVNEWVKTMMHDVIGYDLDTATIQTLTWEEAMTRFGTDKPDLRIPYELKDLS 301

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIFW 361
           E    SEF VF+   +V  G  V AI   GG  +  R   D++ ++    G  GLA++  
Sbjct: 302 ETVKDSEFGVFAN--AVKDGGVVKAIAVPGGAAHYSRKDIDKLAQYIERFGAKGLAWLKV 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK       +A+      ++GD   F AG      +     R   A
Sbjct: 360 TADGIS-----GPIAKFFP--EADALLAATGAKEGDLLLFGAGRADVVAATLDYLRRQTA 412

Query: 422 QELGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL-KGNDLLSIK 478
           Q+L +I+  N + F WI+D+P +E++EE  +   AH+PFTMP +  +  L +G D     
Sbjct: 413 QDLDLIDQDNPWAFAWIVDWPLFEYSEEFNRWIAAHHPFTMPNEADLHYLDEGEDPHQAH 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+ SG IR H  +V  +    +G + E     FG L    + G PP GG
Sbjct: 473 AQSYDLVLNGYELGSGSIRIHRMDVQEKMLKALGFTPEAAHEAFGFLLEGMEYGFPPMGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           IA G+DR+ MLL G  N+REV  FP +    + +  +P+ V  +QL +LGL
Sbjct: 533 IALGLDRLAMLLAGQDNIREVIAFPKNSRATEPMTEAPTRVDGKQLNDLGL 583


>gi|257465380|ref|ZP_05629751.1| aspartyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257451040|gb|EEV25083.1| aspartyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 587

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 221/590 (37%), Positives = 334/590 (56%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S VG  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F++A 
Sbjct: 2   RSHYCGALNRSHVGQAVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE  + I G V++R    IN  + TG+IE+  + + + + A+ LPL     +   E 
Sbjct: 62  ALRSEACVQIQGEVIARDEAQINKEMATGEIEVLVKNVLVYNNADVLPLDF--NQNNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   ME ++ G++      N     F  + + +A+ R+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEEVRAVMEEMIHGLW--LDRLNVDLGKFPMMTWQEAMDRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + EF+VF++  +   G   V  +P  G    R   D   ++    G  GLA+    
Sbjct: 297 DILKNVEFKVFNEPANSPDGRVTVLRVP-NGATLTRKQIDEYTQFVGIYGAKGLAWAKIN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN    +A+  R   Q+GD  FF A             R  + +
Sbjct: 356 DVNAGMEGIQSPVAKFLNEEVFKALIERTSAQNGDILFFGADKWQVVTDSMGALRLKVGR 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ +   ++  W++DFP +E  ++E  +   H+PFT P+G        D +   A  Y
Sbjct: 416 DLGLTDLTAWKPLWVVDFPMFE-RDDEGNLSAMHHPFTSPKGLSPEELAADPVKAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F+ +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIFDPKMQQTVFNILGINEEEQAEKFGFLLDALKFGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L EL + + 
Sbjct: 535 LDRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSYANPQALEELAIAVT 584


>gi|301169026|emb|CBW28623.1| aspartyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 588

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 221/591 (37%), Positives = 334/591 (56%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ + + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRVYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++            F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    +A+  R++ Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+   + ++  W++DFP +E  +EE  +   H+PFT P+         D  S  A  Y
Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+
Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586


>gi|27365486|ref|NP_761014.1| aspartyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|320155869|ref|YP_004188248.1| aspartyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|29611878|sp|Q8DAN7|SYD_VIBVU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|27361634|gb|AAO10541.1| aspartyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|319931181|gb|ADV86045.1| aspartyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 592

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 227/596 (38%), Positives = 336/596 (56%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  + +A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYAVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R    +N  + TG++E+ A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRNEFCIKLTGEVRTRPESQVNKEMATGEVEILAKGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    E ++R ++ E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTSDQVRAVTEKMVREMWLELLNVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  V  I   GG    R   D    +    G  GLA++   
Sbjct: 297 DLVKDVDFKVFSGPANDEKG-RVAVIRVPGGAELTRKQIDEYTGFVNIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK L+      I  R   + GD   F A             R  + +
Sbjct: 356 DRAAGMEGIQSPVAKFLSEDVINGILERTQAESGDIILFGADKANIVAEALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +LG+     +   W++DFP +E  ++E  +   H+PFT P G   E LK N   +I +  
Sbjct: 416 DLGLTKEGTWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGLTAEELKANPAPAI-SNA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A 
Sbjct: 474 YDMVLNGYEVGGGSVRIHNAEMQAAVFDILGIDADEQKLKFGFLLDALKFGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +    +K
Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSVANPAALEELAIAVTVAKEK 589


>gi|294643423|ref|ZP_06721241.1| aspartate--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|292641237|gb|EFF59437.1| aspartate--tRNA ligase [Bacteroides ovatus SD CC 2a]
          Length = 560

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 221/564 (39%), Positives = 324/564 (57%), Gaps = 16/564 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           +RTH+CG+L +SDV   V LSGWV R R  GG+ F+D+RD YGITQ+V N +  +   E 
Sbjct: 2   FRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  R ++  NANI TG IE+   ++ +L+ A   P  +    +  
Sbjct: 62  ANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR+ +  N+  R ++   +R  + +  FIE  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI+ T E + + +F+    G  ++  F R+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQEDIITTFEGMAKHLFKTL-RGVELNEPFQRMSWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y V  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419
            R++  G V     V K       + ++     + GD    ++GD  +K      + R  
Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQQMKDAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     +   D  +++A
Sbjct: 410 MGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H +++  + F  +G + E  E +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVINGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAEAQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
           A G+DR V L  G  ++R+   FP
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|303250101|ref|ZP_07336303.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307252787|ref|ZP_07534678.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|302651164|gb|EFL81318.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306859819|gb|EFM91841.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 591

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 224/595 (37%), Positives = 341/595 (57%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S V   V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+IA 
Sbjct: 3   RSHYCGALNRSHVDQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKIAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE  + I G V++R    IN  + TG+IE+  + + + + A+ LPL  F +    E 
Sbjct: 63  SLRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNVVVYNNADVLPLD-FNQNNTEEQ 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 122 -RLKYRYLDLRRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHNGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   MEN++ G++      N     F  + + +A++R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAEEVRELMENMIHGLW--LDRLNVDLGKFPIMTWQEAMQRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  +   G   V  +P  G    R   D   ++    G  GLA+    
Sbjct: 298 DILKDVEFKVFNEPANSADGRVTVLRVP-NGASLTRKQIDEYTQFVGIYGAKGLAWAKIN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN    +A+  R +   GD  FF A             R  + +
Sbjct: 357 DVNAGMEGIQSPVAKFLNEEVFKALIERTNATSGDILFFGADKWQVVTDSMGALRLKVGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +L + + + ++  W++DFP +E  ++E  +   H+PFT P+    E L  N + ++ A  
Sbjct: 417 DLALTDLSAWKPLWVIDFPMFE-KDDEGNLSAMHHPFTSPKNLTPEELAANPVNAV-ANA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  ++    F  +GI+++  + +FG L  A + G PPH G+A 
Sbjct: 475 YDMVINGYEVGGGSVRIYDPKMQQTVFGILGINEQDQQEKFGFLLDALKFGTPPHAGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L ELG+ +++  K
Sbjct: 535 GLDRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELGIAVLKKEK 589


>gi|83647606|ref|YP_436041.1| aspartyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|97196688|sp|Q2SCK8|SYD_HAHCH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|83635649|gb|ABC31616.1| aspartyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 590

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 224/598 (37%), Positives = 349/598 (58%), Gaps = 15/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG++  S V   V L GWVHR R HGG+IFLD+RD  GI QVV +PD+   F++A+
Sbjct: 2   RSHYCGEVNESLVDQEVTLCGWVHRRRDHGGVIFLDLRDRDGIAQVVYDPDTNEVFQLAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R E+V+ + G V  R     N ++ TG +E+  +++EILS A+  P  +    +  E 
Sbjct: 62  QIRDEFVVKVTGRVRLRPEGKANTDMSTGMVEVLGKQLEILSTAKTPPFQLDEFVQVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR++DLRR  +   +  R+++ + +R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLRYRYMDLRRPEMLNKLRFRSKVTSYIRNFLDGNGFMDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++GSF+ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHEGSFFALPQSPQLFKQLLMMSGVDRYYQIAKCFRDEDLRADRQP-EFTQVDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I++  E ++R +F +          F R+ + +A+ RYG+DKPDLR P+ + +V 
Sbjct: 241 LNENEIMSITERLVRDMFRDLLEVEL--PEFPRMPFSEAMNRYGSDKPDLRIPLELVDVG 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361
           +   +  F VFS   + +P   V A+    GG   +R   D   ++    G  GL YI  
Sbjct: 299 DLLTNVSFNVFSGPAN-DPKSRVAALRLPKGGELLSRKQIDDYTKFVGIYGAKGLPYIKV 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
                G      P+ KH+     + +  R+  +DGD  FF   D  +  + A  A R  +
Sbjct: 358 NEKAKGLDGLQSPIVKHIADA-IDPLLERVGAEDGDIIFF-GTDKTRVVNEALGALRVKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +L ++    +   W++DFP +E  + E      H+PFT P   +E L+ +D  +  + 
Sbjct: 416 GHDLNLLEKQ-WAPLWVVDFPMFE-EDGEGGWTAIHHPFTAPSCAVEMLE-SDPENALSR 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H S++       +GI ++    +FG L  A + G PPHGG+A
Sbjct: 473 AYDMVLNGTELGGGSVRIHDSDMQETVLRILGIGQDEAREKFGFLLDALKFGCPPHGGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI--VENPK 596
            G+DR+VML+ GA+++REV  FP +Q+   ++  +P  V  +QLREL +R+   E P+
Sbjct: 533 FGLDRLVMLMTGAQSIREVIAFPKTQSAMCMMTQAPGKVDPKQLRELNIRLRKTEQPE 590


>gi|257469474|ref|ZP_05633566.1| aspartyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317063718|ref|ZP_07928203.1| aspartyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313689394|gb|EFS26229.1| aspartyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 595

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 236/603 (39%), Positives = 352/603 (58%), Gaps = 35/603 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60
           Y+TH+ G+L   ++G  V LSGWV   R  GG+ F+D+RD  G TQV+ + D A     E
Sbjct: 3   YKTHNLGELRKENIGQEVILSGWVDTKRDLGGLTFVDMRDREGKTQVIFDIDVAPKDVVE 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
            A+ +++E V+ I G V  R ++  N N+ TG IE+ A+++ +L+  + LP  + G +  
Sbjct: 63  QAQKLKNESVIRIVGEVKERQSK--NPNMPTGDIEVFAKELTVLNSCDVLPFQISGIDDN 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+IR KYR+LD+RR  +  N+  R ++I ++R  M  E F++  TP+LT S+PEGARD
Sbjct: 121 LNENIRLKYRYLDIRRSRMLHNLKMRHKMIMAIRNYMDKEGFLDIDTPLLTKSTPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP R++ G FYALPQ+PQ +KQLLM  G +RYFQ+A CFRDED R+DR   EF QLD+
Sbjct: 181 FLVPCRISPGDFYALPQSPQLFKQLLMIGGIERYFQLAKCFRDEDLRADR-QFEFVQLDI 239

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV  +D++ T+E + + VF   + G  V+  F ++ Y +A+ R+G+DKPD+R  + +
Sbjct: 240 EMSFVTMEDVMRTIEGLAKDVFTAIT-GEEVNYTFQKMPYAEAMSRFGSDKPDIRFGVEL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWA-RSQGQPGL 356
            ++TE   +S F+ F +  +V  G  V A+ A  G    +R       E A R  G  G+
Sbjct: 299 KDLTEIVRNSGFKAFQE--TVANGGIVKAVVAPQGAERFSRKIIGEYEEHAKRYFGAKGM 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AYI  ++ E G  +   P+AK L+    +AI        GD    IA D  K    A  A
Sbjct: 357 AYI--KITEEGINS---PIAKFLSEDEMKAIVETTGAVKGDIILIIA-DKAKVVYGALGA 410

Query: 417 -RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL- 474
            R  I +E  +IN + F+F W++DFP ++++EEEK+    H+PFT       S+K  DL 
Sbjct: 411 IRTRIGKEFNLINPDEFKFLWVVDFPMFQYDEEEKRYKAEHHPFT-------SIKDEDLN 463

Query: 475 -------LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                   +I+   YD+V NGFEI  G IR    E+  + F  +G++ E  + +FG    
Sbjct: 464 AFLNGQTENIRTNTYDMVLNGFEIGGGSIRIFNPEIQSKVFDRLGLTPEEAKTKFGFFLD 523

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPHGG+A G+DR +M++L   ++R+V  FP +     L+  +P  V   QL EL
Sbjct: 524 AFKYGAPPHGGLAFGLDRWLMVMLKENSIRDVIPFPKTNKGQCLMTEAPGEVDDGQLEEL 583

Query: 588 GLR 590
            L+
Sbjct: 584 YLK 586


>gi|188025998|ref|ZP_02960488.2| hypothetical protein PROSTU_02440 [Providencia stuartii ATCC 25827]
 gi|188021211|gb|EDU59251.1| hypothetical protein PROSTU_02440 [Providencia stuartii ATCC 25827]
          Length = 601

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 222/589 (37%), Positives = 333/589 (56%), Gaps = 9/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L ++  G  V L GWV+R R  GG+IF+D+RD  G+ QV  +P+    FE A 
Sbjct: 13  RTNYCGQLNIAHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGVVQVFFDPERKDLFEKAS 72

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R     N ++ TG+IE+ A+ + + + +E  PLP+   +   E 
Sbjct: 73  ELRNEFCIQITGTVRARPDNQKNKDMATGEIEIFAEDLNVFNKSE--PLPLDSNQSNTEE 130

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M  E FI+  TP+LT ++PEGARD+LVP
Sbjct: 131 RRLKYRYLDLRRPEMSERLRTRAKITSFVRNFMDKEGFIDVETPMLTKATPEGARDYLVP 190

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 191 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 249

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++R ++ +    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 250 MTAEQVREIMERMIRQLWLDVKGVDL--GDFPIMTFAEAMRRYGSDKPDLRNPMELVDVA 307

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF VFS   +   G  V      G    R   D   ++    G  GLA++    
Sbjct: 308 DIVKNVEFAVFSGPANDPKGRVVALKVPNGAVMTRKQIDEYGQFVSIYGAKGLAWMKVNE 367

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN      +  R +  DGD   F AG            R  + ++
Sbjct: 368 RAKGLEGIQSPVAKFLNEDVINQLLERTEAADGDILLFGAGAKNVVTDSMGALRLKVGRD 427

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQY 482
             + + N ++  W++DFP +E  + E  +   H+PFT P+    E L  N   ++ A  Y
Sbjct: 428 FELADLNSWKPLWVIDFPMFE-EDGEGGLSAMHHPFTSPRDYSPEDLAKNPEEAV-ANAY 485

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H SE+    F+ +GI++     +FG L  A + G PPH G+A G
Sbjct: 486 DMVINGYEVGGGSVRIHRSEMQQTVFNILGINEHEQREKFGFLLDALKYGTPPHAGLAFG 545

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR+VMLL G  N+R+V  FP +     LL  +PS  + + L EL + +
Sbjct: 546 LDRLVMLLTGTDNIRDVIAFPKTTAAACLLTSAPSQANPDALTELAISV 594


>gi|145632568|ref|ZP_01788302.1| aspartyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144986763|gb|EDJ93315.1| aspartyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 588

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 222/591 (37%), Positives = 334/591 (56%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++ LPL     +   E 
Sbjct: 63  SLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++  ++            F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHDLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    +A+  R++ Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+   + ++  W++DFP +E  +EE  +   H+PFT P+         D  S  A  Y
Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+
Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586


>gi|30063276|ref|NP_837447.1| aspartyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|30041528|gb|AAP17256.1| aspartate tRNA synthetase [Shigella flexneri 2a str. 2457T]
          Length = 590

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 225/592 (38%), Positives = 332/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      PVAK LN    EAI  R   QDGD  FF A +              + +
Sbjct: 356 ERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ + + +   W++DFP    ++ E  +   H+PFT P+    +       +  A  Y
Sbjct: 416 DLGLTDESKWAPLWVIDFPML-GDDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G
Sbjct: 475 DMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 535 LDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 586


>gi|253582252|ref|ZP_04859475.1| aspartate-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251835791|gb|EES64329.1| aspartate-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 595

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 235/603 (38%), Positives = 353/603 (58%), Gaps = 35/603 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60
           Y+TH+ G+L   ++G  V LSGWV   R  GG+ F+D+RD  G TQV+ + D A     E
Sbjct: 3   YKTHNLGELRKENIGQEVILSGWVDTKRDLGGLTFVDMRDREGKTQVIFDIDVAPKDVVE 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
            A+ +++E V+ I G V  R ++  N+N+ TG IE+ A+++ +L+  + LP  + G +  
Sbjct: 63  QAQKLKNESVIRIVGEVKERQSK--NSNMPTGDIEVFAKELVVLNNCDVLPFQISGIDDN 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+IR KYR+LD+RR  +  N+  R ++I ++R  M  E F++  TP+LT S+PEGARD
Sbjct: 121 LNENIRLKYRYLDIRRSRMLHNLKMRHKMIMAIRNFMDKEGFLDIDTPLLTKSTPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP R++ G FYALPQ+PQ +KQLLM  G +RYFQ+A CFRDED R+DR   EF QLD+
Sbjct: 181 FLVPCRISPGDFYALPQSPQLFKQLLMIGGVERYFQLAKCFRDEDLRADR-QFEFVQLDI 239

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV  DD++ T+E + + VF   + G  V+  F ++ Y +A+ R+G+DKPD+R  + +
Sbjct: 240 EMSFVTMDDVMRTIEGLAKNVFTAIT-GEEVNYTFQKMPYAEAMSRFGSDKPDIRFGVEL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWA-RSQGQPGL 356
            ++TE   +S F+ F +  +V  G  V A+ A  G    +R       E A R  G  G+
Sbjct: 299 KDLTEIVRNSGFKAFQE--TVANGGIVKAVVAPQGAEKFSRKIIGEYEEHAKRYFGAKGM 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AYI  ++ E G  +   P+AK L+    ++I        GD    IA D  K    A  A
Sbjct: 357 AYI--KITEEGINS---PIAKFLSEDEMKSIVETTGAVKGDIILIIA-DKAKVVYGALGA 410

Query: 417 -RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL- 474
            R  I +E  +IN + F+F W++DFP ++++EEE++    H+PFT       S+K  DL 
Sbjct: 411 IRTRIGREFNLINPDEFKFLWVVDFPMFQYDEEEQRYKAEHHPFT-------SIKDEDLN 463

Query: 475 -------LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                   +I+   YD+V NGFEI  G IR    E+  + F  +G++ E  + +FG    
Sbjct: 464 AFLDGQTENIRTNTYDMVLNGFEIGGGSIRIFNPEIQAKVFDRLGLTPEEAKTKFGFFLD 523

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPHGG+A G+DR +M++L   ++R+V  FP +     L+  +P  V   QL EL
Sbjct: 524 AFKYGAPPHGGLAFGLDRWLMVMLKENSIRDVIPFPKTNKGQCLMTEAPGEVDEGQLEEL 583

Query: 588 GLR 590
            L+
Sbjct: 584 YLK 586


>gi|37680472|ref|NP_935081.1| aspartyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|46577167|sp|Q7MJ74|SYD_VIBVY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|37199220|dbj|BAC95052.1| aspartyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 592

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 226/596 (37%), Positives = 336/596 (56%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  + +A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYAVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R    +N  + TG++E+ A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRNEFCIKLTGEVRTRPESQVNKEMATGEVEILAKGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    E ++R ++ E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTSDQVRAVTEKMVREMWLELLNVDL--GEFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  V  I   GG    R   D    +    G  GLA++   
Sbjct: 297 DLVKDVDFKVFSGPANDEKG-RVAVIRVPGGAELTRKQIDEYTGFVNIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK L+      I  R   + GD   F A             R  + +
Sbjct: 356 DRAAGMEGIQSPVAKFLSEDVINGILERTQAESGDIILFGADKANIVAEALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +LG+     +   W++DFP +E  ++E  +   H+PFT P G   E LK N   ++ +  
Sbjct: 416 DLGLTKEGTWAPLWVVDFPMFE-EDDEGNLHAMHHPFTSPLGLTAEELKANPAPAV-SNA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A 
Sbjct: 474 YDMVLNGYEVGGGSVRIHNAEMQAAVFDILGIDADEQKLKFGFLLDALKFGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +    +K
Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSVANPAALEELAIAVTVAKEK 589


>gi|197336170|ref|YP_002155712.1| aspartyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|238690280|sp|B5FCP9|SYD_VIBFM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|197317660|gb|ACH67107.1| aspartyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 591

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 232/598 (38%), Positives = 338/598 (56%), Gaps = 15/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG+L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD    FE+A 
Sbjct: 2   RTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDVFEVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ +   G V  R    +N ++ TG++EL A  +EI++ +  LPL     +   E 
Sbjct: 62  QLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELLATGLEIINRSAALPLDF--NQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R KYR++DLRR  +   I  R R  + +R R + EN F++  TP+LT ++PEGARD+LV
Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVR-RFLDENLFLDIETPVLTKATPEGARDYLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E S
Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+   ++ N  E ++  +++E  +       F  + + +A+RR+G+DKPDLRNP+ + +V
Sbjct: 238 FMTSQEVRNVTERLVHDMWKELLDVEL--GQFPVMPFSEAMRRFGSDKPDLRNPLELVDV 295

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     +F+VFS   +   G  V  I   GG   +R   D    +    G  GLA++  
Sbjct: 296 ADLVKDVDFKVFSGPANDEKG-RVAVIRVSGGASLSRKQIDEYGNFVGIYGAKGLAWMKV 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
               +G      PVAK LN     AI  R   + GD   F A D     S A  A R  +
Sbjct: 355 NDRAAGFEGVQSPVAKFLNEEVINAILERTQAETGDIILFGA-DKAGIVSEAMGALRLKL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
             +L + + + +   W++DFP +E  + E  +   H+PFT P G   E L+ N   +  +
Sbjct: 414 GTDLELTDTSAWAPLWVVDFPMFE-EDGEGNLHAMHHPFTSPLGVSAEELQANP-AAANS 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+
Sbjct: 472 DAYDMVINGYEVGGGSVRIHNAEMQTAVFGILGIEAQEQQEKFGFLLEALKYGTPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+ MLL G +N+R+V  FP +     LL  +PS  +   L EL + +    KK
Sbjct: 532 AFGLDRLAMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAVKLAEKK 589


>gi|315222433|ref|ZP_07864334.1| aspartyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188457|gb|EFU22171.1| aspartyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 579

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 221/590 (37%), Positives = 331/590 (56%), Gaps = 25/590 (4%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    DS  F     +  E
Sbjct: 6   IGNYGLEQVGQKMTATGWVANIRNHGKLAFIELRDREGLLQVFVAGDSPAFAEIDHLHKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R +  +N  I +GQ+EL A+ I+ILS ++ LP  V       E +R KY
Sbjct: 66  DVIAVTGEVVERESRFVNKAIKSGQVELRAEAIQILSNSKPLPFEVDQHAHTGEELRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR  + +N+  R ++ +++R  +  ++F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRRSKMTENLKLRHQVTSTIRDYLNGKDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+Q+  CFRDED R DR P EF Q+DMEMSF  + D
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQVVRCFRDEDLRGDRQP-EFTQVDMEMSFASEKD 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++G  ++  F  I Y++A+ R+GTDKPD R  + + N+T     
Sbjct: 245 IRMLVEEMLKAVVKK-THGLELTEAFPTISYEEAMNRFGTDKPDTRFGLELKNLTALCQD 303

Query: 309 SEFRVFSKILSVNPGYEVWAI--PAKGGGGNRA----FCDRMNEWARSQGQPGLAYIFWR 362
           +   +  +  + +   E+W I  P       +     F   M E+  S+        F  
Sbjct: 304 NSSLLLKQAFARHE--ELWGICVPDAADSFTKKQLSHFYQEMKEFGASR--------FAS 353

Query: 363 LD-ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           L  E+G +   G +A         A   RL+ QDGD    +     +        R  IA
Sbjct: 354 LKVEAGEL--QGDLASTFE-AEAAAFLDRLEAQDGDLLLLVIAKKRQAQEALGHLRLEIA 410

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +I+ +   F W++D+P  EWNEE+ +    H+PFT  QG  E+ K  DL SIK+  
Sbjct: 411 KQLDLIDQSQLNFLWVLDWPLLEWNEEQGRYQAMHHPFT--QGIFENEK-EDLASIKSHA 467

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+EI  G +R H  +     F  +G+ KE  E  FG    A + G PPHGG+A 
Sbjct: 468 YDIVLNGYEIGGGSLRIHDRKSQEAMFELLGMEKEDYERDFGFFLEALEYGFPPHGGLAL 527

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VM+L+G +N+R+V  FP +    D ++ SPS V   Q++EL L +
Sbjct: 528 GLDRLVMILVGEENIRQVIAFPKNGTGFDPMLESPSQVDASQVKELHLEL 577


>gi|149911273|ref|ZP_01899895.1| Putative aspartyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805658|gb|EDM65658.1| Putative aspartyl-tRNA synthetase [Moritella sp. PE36]
          Length = 592

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 227/597 (38%), Positives = 341/597 (57%), Gaps = 14/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +  + +G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  FE A 
Sbjct: 2   RTVYCGQVNETHIGQQVVLCGWVNRRRDLGGVIFIDLRDREGIVQVVYDPDLADVFERAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R E+ + I G V +R    IN ++ TG +E+S  ++E+ + A+ LPL  F +    E 
Sbjct: 62  QLRQEFCVKITGKVRARDERQINKDMATGGVEISGLELEVFNKADILPLD-FNQTNTEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYRFLDLRR  +   +  R ++ + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRFLDLRRPEMSNRLKTRAKVSSFVRRFMDDHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRTHKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +    E+++  +++E  +    +  F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSAAQVREVTESLVTNMWKEILDVELPA--FPSMTYAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  + NP   V  +   GG   +R   D   ++    G  G+A++  +
Sbjct: 297 DLLKDVEFKVFAEPAN-NPKGRVAVLCVTGGAKLSRKQIDEYTKFVGIYGAKGMAWMKVK 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK L+     A+  R + +DGD  FF   D  K  + A  A R  + 
Sbjct: 356 DVAAGAEGVQSPVAKFLSADVITALLERTNAKDGDIIFF-GADTNKVVTEALGALRLKVG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
            +L  +  N ++  W++DFP +E  +EE  +   H+PFT P       L  N   +I   
Sbjct: 415 VDLE-LTSNEWKPLWVVDFPMFE-EDEEGNLHAVHHPFTAPMDVNAAELLANPANAISD- 471

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H  E+    F  +GI  +  +++FG L  A + G PPH G+A
Sbjct: 472 AYDMVINGYEVGGGSVRIHKGEMQKAVFEILGIEDKEQQDKFGFLLEALKYGTPPHAGLA 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+ MLL G  N+R+V  FP +     LL  +PS  +   L EL + +V+  KK
Sbjct: 532 FGLDRLTMLLTGTDNIRDVIAFPKTTTAACLLTSAPSEANPASLEELSIAVVKKEKK 588


>gi|240949964|ref|ZP_04754280.1| aspartyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240295564|gb|EER46290.1| aspartyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 588

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 221/590 (37%), Positives = 334/590 (56%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S VG  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F++A 
Sbjct: 3   RSHYCGALNRSHVGQAVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKVAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E  + I G V++R    IN  + TG+IE+  + + + + A+ LPL  F +    E 
Sbjct: 63  ALRAEACVQIQGEVIARDESQINKEMATGEIEVLVKNVLVYNNADVLPLD-FNQNNTEEQ 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 122 -RLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   ME ++ G++      N     F  + + +A+ R+G+DKPDLRNP+ + +V 
Sbjct: 240 MTAEEVRAVMEEMIHGLW--LDRLNVDLGKFPMMTWQEAMDRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  +   G   V  +P  G    R   D   ++    G  GLA+    
Sbjct: 298 DILKDVEFKVFNEPANSPDGRVTVLKVP-NGAALTRKQIDEYTQFVGIYGAKGLAWAKIN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN    +A+  R   Q+GD  FF A             R  + +
Sbjct: 357 DVNAGMEGIQSPVAKFLNEDVFKALIERTSAQNGDILFFGADKWQVVTDSMGALRLKVGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+ +   ++  W++DFP +E  ++E  +   H+PFT P+G        D +   A  Y
Sbjct: 417 DLGLTDLTAWKPLWVVDFPMFE-RDDEGNLSAMHHPFTSPKGLSPEELAADPVKAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F+ +GI++E    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFNILGINEEEQAEKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L EL + + 
Sbjct: 536 LDRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSYANPQALEELAISVT 585


>gi|59711556|ref|YP_204332.1| aspartyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|81310972|sp|Q5E6A2|SYD_VIBF1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|59479657|gb|AAW85444.1| aspartyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 591

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 232/598 (38%), Positives = 339/598 (56%), Gaps = 15/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG+L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD    FE+A 
Sbjct: 2   RTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDVFEVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ +   G V  R    +N ++ TG++EL A  +EI++ +  LPL     +   E 
Sbjct: 62  QLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELLATGLEIINRSAALPLDF--NQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R KYR++DLRR  +   I  R R  + +R R + EN F++  TP+LT ++PEGARD+LV
Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVR-RFLDENLFLDIETPVLTKATPEGARDYLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E S
Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+   ++ N  E ++  +++E  +       F  + + +A+RR+G+DKPDLRNP+ + +V
Sbjct: 238 FMTSQEVRNVTERLVHDMWKELLDVEL--GQFPVMPFSEAMRRFGSDKPDLRNPLELVDV 295

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     +F+VFS   +   G  V  I   GG   +R   D    +    G  GLA++  
Sbjct: 296 ADLVKDVDFKVFSGPANDEKG-RVAVIRVPGGASLSRKQIDEYGNFVGIYGAKGLAWMKV 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
               +G      PVAK LN     AI  R   + GD   F A D     S A  A R  +
Sbjct: 355 NDRAAGFEGVQSPVAKFLNEEVVNAILERTQAETGDIILFGA-DKAGIVSEAMGALRLKL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
             +L + + + +   W++DFP +E  + E  +   H+PFT P G   E L+ N  ++  +
Sbjct: 414 GTDLELTDTSAWAPLWVVDFPMFE-EDGEGNLHAMHHPFTSPLGVSAEELQANPAVA-NS 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+
Sbjct: 472 DAYDMVINGYEVGGGSVRIHNAEMQTAVFGILGIEAKEQQEKFGFLLEALKYGTPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+ MLL G +N+R+V  FP +     LL  +PS  +   L EL + +    KK
Sbjct: 532 AFGLDRLAMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAVKLAEKK 589


>gi|116618407|ref|YP_818778.1| aspartyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122271393|sp|Q03WL7|SYD_LEUMM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116097254|gb|ABJ62405.1| aspartyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 591

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 221/593 (37%), Positives = 334/593 (56%), Gaps = 10/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+  G +  + +   V L+GWV + R  G +IF+D+RD  GI Q+  N  +A    +A+
Sbjct: 3   RTNYAGLIDETYLNQTVTLTGWVQKRRDFGDLIFVDLRDREGIVQLTFNATNADALAVAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL I G V+ R+   IN  I +G IE+   + EILS ++  P  +  +    E 
Sbjct: 63  KVRSEYVLKITGHVIERAENQINTKIKSGTIEVDVTEAEILSTSKTPPFYIEDDVNANEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           ++ +YR+LDLRR  + KN+  R++I++S    M   +FI   TP+L  S+PEGARD+LVP
Sbjct: 123 LKLQYRYLDLRRPEMQKNLRIRSKIMSSAMHFMDTHDFINIETPVLAKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV  GSFYALPQ+PQ +KQLLM +GFDRYFQIA  FRDED R DR P EF Q+D+E SF
Sbjct: 183 SRVFPGSFYALPQSPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQP-EFTQMDVETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D+I   +   ++ +  +  + +  +     + + +++ R+GTDKPDLR    + +++
Sbjct: 242 MTADEIRELVNAWVKAMMHDVVDFDLDTAEIPTLTWQESMDRFGTDKPDLRIAYEIKDLS 301

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E   +SEF VF+  +      +  A+P      +R   D++ ++    G  GLA++  ++
Sbjct: 302 ETVKNSEFGVFANAIKGGGVVKALAVPGGADHYSRKDIDKLTKYIERFGAKGLAWM--KV 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G     GP+AK  +     A+    D Q GD   F AG      +     R   A+ 
Sbjct: 360 APEGLT---GPIAKFFDDEAQAALIASADAQVGDLLLFGAGRADVVSATLDYLRRETAKA 416

Query: 424 LGIIN-CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLK-GNDLLSIKAF 480
           L +I+  N + F WI+D+P +E++E+  +   AH+PFTMP +  +  L  G D     A 
Sbjct: 417 LDLIDQTNPWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPNEEDLHYLNDGEDPHKAHAQ 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+ SG IR H  ++  +    +G + E     FG L    + G PP GGIA
Sbjct: 477 SYDLVLNGYELGSGSIRIHRMDIQEKMLKALGFTPEKAHEAFGFLLEGMEYGFPPMGGIA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR+ MLL G +N+REV  FP +    + +  +P+ V  +QL ELGL + E
Sbjct: 537 LGLDRLAMLLAGQENIREVIAFPKNSRATEPMTEAPTRVEGKQLNELGLFVPE 589


>gi|237717546|ref|ZP_04548027.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229453132|gb|EEO58923.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 587

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           +RTH+CG+L +SDV   V LSGWV R R  GG+ F+D+RD YGITQ+V N +  +   E 
Sbjct: 2   FRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  R ++  NANI TG IE+   ++ +L+ A   P  +    +  
Sbjct: 62  ANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIENNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR+ +  N+  R R+   +R  + +  FIE  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHRMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI+ T E + + +F+    G  ++  F R+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQEDIITTFEGMAKHLFKTL-RGVELAEPFQRMSWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y V  I A+G     R   D + ++ +         ++
Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTDFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419
            R++  G V     V K       + ++     + GD    ++GD  +K      + R  
Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     +   D  +++A
Sbjct: 410 MGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAQAQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQTQLDELNL 579


>gi|291458448|ref|ZP_06597838.1| aspartate--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418981|gb|EFE92700.1| aspartate--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 582

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/580 (39%), Positives = 336/580 (57%), Gaps = 17/580 (2%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           +G  V + GWV + R  GG+IF D+RD  GI Q++    +     FE A  +RSE+V+ +
Sbjct: 2   IGQEVTMMGWVQKSRNKGGLIFTDLRDRSGILQILFEEKDCGQEVFEKAARLRSEFVIAV 61

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V SR  + INA + TG IELSA+++ ILS +E  P P+       E +R KYR+LDL
Sbjct: 62  SGIVQSRGKD-INAELSTGSIELSARELRILSESEVPPFPIEDGIRTKEELRLKYRYLDL 120

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           RR  L K I+ R RI   +R R + EN F+E  TP L  S+PEGARDFLVPSR++ GSFY
Sbjct: 121 RRPELQKRIMTRARISFLIR-RFLTENGFLEIETPTLIKSTPEGARDFLVPSRLHHGSFY 179

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           ALPQ+PQ  KQLLM SG DRYFQ+A C+RDED R+DR P EF Q+DME+SF + +D+L  
Sbjct: 180 ALPQSPQLLKQLLMVSGMDRYFQLARCYRDEDLRADRQP-EFTQVDMELSFADVEDVLEL 238

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            E +L+ +F E   G  ++    R+ + DA+  YG+DKPDLR  + + ++TE      F 
Sbjct: 239 NERLLQFIFREVC-GVELTLPLRRMRWIDAMNDYGSDKPDLRFGMKLMDLTELLRDCGFS 297

Query: 313 VFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
           VFS    V  G  +  +   GG G  R   D   ++ +  G  GLAY+   L E G+   
Sbjct: 298 VFSD--CVREGGIIKGLKLPGGAGMPRKKIDAYTDFVKECGAKGLAYL--SLMEDGSCK- 352

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCN 430
               AK L     E I   +  + GD  F ++    +    +  A R  + ++  +I+  
Sbjct: 353 -SSFAKFLREGEKERICEAMRAKAGDLLFLVSDRDRRVVWNSLGALRLSLGRDFSLIDEK 411

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
            + F W+ +FP +E++EE  +    H+PFTMP      L   D  +++A  YD+V NG E
Sbjct: 412 AWSFLWVTEFPMFEYSEELGRFQAMHHPFTMPMEEDLPLLDTDPGAVRAKAYDIVLNGTE 471

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           +  G +R H +EV  +    +G ++E    +FG L +AF+ G+PPH G+A G+DR+ M +
Sbjct: 472 LGGGSVRIHQAEVQERMLEKLGFTRERAMEQFGFLMQAFRYGVPPHAGLAYGLDRLAMWM 531

Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE-QLRELGL 589
           +G+  +R+V  FP  ++  D +M +P+ V  E QL +LG+
Sbjct: 532 VGSDTIRDVIAFPKGKDGSDAMMEAPAPVFEEQQLLDLGI 571


>gi|85712315|ref|ZP_01043366.1| Aspartyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85693942|gb|EAQ31889.1| Aspartyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 590

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 219/599 (36%), Positives = 341/599 (56%), Gaps = 31/599 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG +        V L GWV++ R  GG+IF+D+RD  G+ QVV +PD +A FE A 
Sbjct: 2   RTHYCGQVTAELAEQEVTLCGWVNKRRDLGGLIFIDLRDREGLVQVVFDPDENALFEQAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R E+ + I G V  R    +NAN+ TG++E+ A+++ ILS +E  PLP+    +  E 
Sbjct: 62  RLRQEFCVQIRGKVNRRPDSQVNANMKTGEVEILAKELTILSRSE--PLPIDFNSQVSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  +++N+  R ++ +++R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLRYRYLDLRRPQMNENLQFRAKVASAVRRFLDDNGFLDIETPMLTRATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRTHKGRFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E + R +F++  + +     F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSAEQVMEVTETMTRQLFQQLLDIDL--GKFPTMTWHEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G   V  +P +    +R   D   ++    G  GLA+I   
Sbjct: 297 DLLKDVEFKVFSGPANDEKGRVAVIRLPGQADNVSRKMIDEYTQFVGIYGAKGLAWIKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K L      AI  R +   GD  F           F +D  N +A+
Sbjct: 357 DLSQGREGLQSPILKFLPDEALNAILERTEAATGDILF-----------FGSDKANVVAE 405

Query: 423 ELGIINCN---CFEFC-------WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKG 471
            +G +       FE         W++DFP +E  +++ ++   H+PFT P     E LK 
Sbjct: 406 AMGALRLKLGETFELVSDEWRPLWVVDFPMFE-EDDDGRLAAMHHPFTAPVNVTPEELKA 464

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           N   ++ +  YD+V NG E+  G +R H + +   AF  +GI  E  + +FG L  A + 
Sbjct: 465 NPAQAL-SNAYDMVLNGVEVGGGSVRIHDNAMQQAAFEVLGIGAEEAKEKFGFLLEALKY 523

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G PPH G+A G+DR+VML++GA ++R+V  FP +     +L  +P   + + L+ELG++
Sbjct: 524 GTPPHAGLAFGLDRLVMLMVGASSIRDVIAFPKTTTAACVLTDAPGLANPDALQELGVK 582


>gi|260175001|ref|ZP_05761413.1| aspartyl-tRNA synthetase [Bacteroides sp. D2]
 gi|299145644|ref|ZP_07038712.1| aspartate--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|315923234|ref|ZP_07919474.1| aspartyl-tRNA synthetase [Bacteroides sp. D2]
 gi|298516135|gb|EFI40016.1| aspartate--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|313697109|gb|EFS33944.1| aspartyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 587

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           +RTH+CG+L +SDV   V LSGWV R R  GG+ F+D+RD YGITQ+V N +  +   E 
Sbjct: 2   FRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCER 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ + G V  R ++  NANI TG IE+   ++ +L+ A   P  +    +  
Sbjct: 62  ANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR+ +  N+  R R+   +R  + +  FIE  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHRMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI+ T E + + +F+    G  ++  F R+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQEDIITTFEGMAKHLFKTL-RGVELAEPFQRMSWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y V  I A+G     R   D + ++ +         ++
Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTDFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419
            R++  G V     V K       + ++     + GD    ++GD  +K      + R  
Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     +   D  +++A
Sbjct: 410 MGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAQAQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQTQLDELNL 579


>gi|121535604|ref|ZP_01667411.1| aspartyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121305844|gb|EAX46779.1| aspartyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 510

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 218/511 (42%), Positives = 304/511 (59%), Gaps = 12/511 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTH CG+L     G  V L GWV R R HGG+IF+D+RD  GI QVV  P  D   F  A
Sbjct: 9   RTHYCGELRKEHGGQEVVLCGWVARRRDHGGLIFIDLRDRSGIVQVVFAPEMDQEAFRKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  R+E+VL + G V  RS  T+N NI TG+IE+  +++ +L+ A+  P  +    +  E
Sbjct: 69  ELARNEYVLAVRGTVKVRSEATVNPNIPTGEIEVYCREVRLLNAAKTPPFYIQDNIDVDE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + +N++ R R+  +MR       F+E  TP+LT S+PEGARD+LV
Sbjct: 129 LLRLKYRYLDLRRPEMQRNLILRHRVTKAMRDFFDRHGFVEVETPMLTKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQ+LM +G DRYFQIA CFRDED R+DR P EF QLD+EMS
Sbjct: 189 PSRVNPGKFYALPQSPQIFKQILMVAGLDRYFQIARCFRDEDLRADRQP-EFTQLDVEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE+DD+LN ME ++  +F+E + G TV   F R+ YD+A+ RYGTDKPD R  + + ++
Sbjct: 248 FVERDDVLNLMEEMIAFIFKE-AIGATVPLPFPRLSYDEAMARYGTDKPDTRFGMELIDI 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           +     S+F+VF  +L  N   +V AI  KG     R   D + E+  + G  GLA+I +
Sbjct: 307 SSAVQGSDFKVFQSVLDQNG--QVKAINVKGYANIPRRELDGLVEYVANFGAKGLAWICY 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             DE        P+AK  +      I      Q GD    +A  P    +     R  +A
Sbjct: 365 -TDEGIK----SPIAKFFSDDIMRRITEVTQAQPGDLLLMVADRPAVVATALGQLRLEMA 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L +I+ N   F W++DFP +E++EEE++    H+PFT P+       G+D   IKA  
Sbjct: 420 RRLNLIDPNKLSFLWVLDFPMFEYDEEERRWVAMHHPFTSPRDEDVEFLGSDPARIKAKA 479

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
           YD+V NG EI  G IR +  ++  + F+ +G
Sbjct: 480 YDMVLNGTEIGGGSIRIYNRDLQEKVFAAIG 510


>gi|116750786|ref|YP_847473.1| bifunctional aspartyl-tRNA synthetase/aspartyl/glutamyl-tRNA
           amidotransferase subunit C [Syntrophobacter fumaroxidans
           MPOB]
 gi|116699850|gb|ABK19038.1| aspartyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 705

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 226/601 (37%), Positives = 342/601 (56%), Gaps = 32/601 (5%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSV 65
           CG+L +SDVGS V LSGWV  +R HG ++F+ +RD  G  Q V +P+      +E+A S+
Sbjct: 9   CGNLSLSDVGSEVCLSGWVDALRDHGEVLFIHLRDRTGFIQAVFSPEHTPRRVYELASSL 68

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER------- 118
           RSE+ + + G V  R+ ET N +I TG+IE+  +++ IL+ +  LP P+  +        
Sbjct: 69  RSEFCVSLQGRVQRRTEETENPHIETGKIEVMVRELSILAASVVLPFPISEKAMTAGGGS 128

Query: 119 ----EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                  E +R +YR+LDLRR ++  ++ KR RII   R  +    F+E  TPILT S+P
Sbjct: 129 GRADAVSEDLRLQYRYLDLRRPSMQDHLAKRYRIIKRARDFLDTRGFLEIETPILTKSTP 188

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EGARD+LVPSRV+   FYALPQ+PQ +KQLLM +GF+RYFQ+  CFRDED R +R P EF
Sbjct: 189 EGARDYLVPSRVHPKEFYALPQSPQLFKQLLMMAGFERYFQVVRCFRDEDLRPNRQP-EF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            QLDME SF++++ I    E ++  +FE    G  +   F R+ Y +A+  YG+D+PD R
Sbjct: 248 TQLDMEASFIDEEFIFELTEELVARMFE--VGGIELPRPFPRMPYGEAMETYGSDRPDTR 305

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR----S 350
             +     T+ F ++ + +F +IL    G  +  I   G     +     NE+A+    S
Sbjct: 306 FDLKFIEATDIFENTRYGIFKQIL--QRGGRIKGINVSGQSEKLSKNVLQNEYAKEIVPS 363

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
            G  G+ ++  R+   G  +    + +  +     A+  R   +DGD    IA       
Sbjct: 364 FGAKGMTWM--RVSAGGLDSN---IVQFFSEEEKGAVLRRFHARDGDVILMIADASHDLV 418

Query: 411 -SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMES 468
            S     R H+A  LG+I    F   W+ DFP +E  E+   +  +H+PFT P +   + 
Sbjct: 419 LSALGQLRLHLADRLGLIPPGVFHPLWVTDFPLFEATED--GVTSSHHPFTAPDRESFDP 476

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           L    LL +++  YDLV NG E+  G +R +  ++ L+ F  +G+S++ +E++FG   RA
Sbjct: 477 LDLQGLLDLRSRAYDLVVNGEELGGGSMRINKKDIQLRIFRALGLSEQEIEDKFGFFVRA 536

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
              G PPHGGIA G+DR+V ++L   ++REV+ FP +++    L  +PS V+ EQLRELG
Sbjct: 537 LDYGAPPHGGIALGLDRVVSMILRTPSIREVTAFPKNRSAYCPLTRAPSQVAQEQLRELG 596

Query: 589 L 589
           L
Sbjct: 597 L 597


>gi|56460197|ref|YP_155478.1| aspartyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|62287527|sp|Q5QYV2|SYD_IDILO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56179207|gb|AAV81929.1| Aspartyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 589

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 217/592 (36%), Positives = 339/592 (57%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG +     G  V L GWV++ R  GG+IF+D+RD  G+ QVV +PD  A FE A 
Sbjct: 2   RTHYCGQINAELAGQEVTLCGWVNKRRDLGGLIFIDLRDREGLLQVVFDPDQKALFETAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R E+ + + G V  R    +N N+ TG++EL A  +EI S +E  PLP+   ++  E 
Sbjct: 62  SLRQEFCVRLSGKVNRRPESQVNKNMATGEVELLATDLEIFSRSE--PLPIDFNQQVSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  +++ +  R ++ +++R       F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLRYRYLDLRRPQMNEKLQFRAKVTSAVRRFFDDNGFLDIETPMLTRATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRTHKGRFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E + R +F++  + +     F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSAEQVMEITEQMARDLFKQLLDVDL--GEFPSMTWHEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +     EF+VFS   +   G  V AI  P +    +R   D   ++    G  GLA+I  
Sbjct: 297 DVLKDVEFKVFSGPANDEEG-RVAAIRLPGQAENVSRKMIDEYTQFVGIYGAKGLAWIKV 355

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
               +G      PV K L     E +  R+  + GD  FF +             R  + 
Sbjct: 356 NDRSAGREGLQSPVLKFLPDEVIEPLLERMQAETGDVLFFGSDKSHVVAEALGALRLKLG 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAF 480
           ++  +++ N ++  W++DFP +E   ++  +   H+PFT P     E LK N   +I + 
Sbjct: 416 KDFELVS-NEWKPLWVVDFPMFEVA-DDGSLAALHHPFTAPVNVTPEELKANPAAAI-SN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H + +    F  +GI K+  + +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGVELGGGSVRIHENAMQQAVFEVLGIEKDEAQEKFGFLLEALKYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VML++GA ++R+V  FP +     +L  +P   +   L+ELG++ +
Sbjct: 533 FGLDRLVMLMVGASSIRDVIAFPKTTTAACVLTDAPGAANPAALQELGVKSI 584


>gi|293373057|ref|ZP_06619425.1| aspartate--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292631943|gb|EFF50553.1| aspartate--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 611

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/592 (38%), Positives = 340/592 (57%), Gaps = 16/592 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACF 59
           + +RTH+CG+L +SDV   V LSGWV R R  GG+ F+D+RD YGITQ+V N +  +   
Sbjct: 24  YMFRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELC 83

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +  E+V+ + G V  R ++  NANI TG IE+   ++ +L+ A   P  +    +
Sbjct: 84  ERANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTD 141

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + IR KYR+LDLRR+ +  N+  R R+   +R  + +  FIE  TP+L  S+PEGARD
Sbjct: 142 GGDDIRMKYRYLDLRRNAVRSNLELRHRMTIEVRKYLDSLGFIEVETPVLIGSTPEGARD 201

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D 
Sbjct: 202 FVVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDC 260

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVEQ+DI+ T E + + +F+    G  ++  F R+ + DA++ YG+DKPDLR  +  
Sbjct: 261 EMSFVEQEDIITTFEGMAKHLFKTL-RGVELAEPFQRMSWADAMKYYGSDKPDLRFGMKF 319

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358
             + +      F VF      N  Y V  I A+G     R   D + ++ +         
Sbjct: 320 VELMDIMKGHGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTDFVKKPQIGAKGM 373

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADAR 417
           ++ R++  G V     V K       + ++     + GD    ++GD  +K      + R
Sbjct: 374 VYARVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELR 431

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     +   D  ++
Sbjct: 432 LEMGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAV 491

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 492 RADAYDMVVNGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAQAQFGFLMNAFKYGAPPHG 551

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           G+A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L
Sbjct: 552 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQTQLDELNL 603


>gi|188591186|ref|YP_001795786.1| aspartyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|238692931|sp|B2AH15|SYD_CUPTR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|170938080|emb|CAP63064.1| aspartate tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 602

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 227/597 (38%), Positives = 340/597 (56%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CF 59
           M   RTH CG +     G  V L+GWV R R HGG+IF+D+RD  G+ QVV +PD    F
Sbjct: 1   MSSMRTHYCGLVTEQFSGQEVALTGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A+ +R+E+ + + G V  R A T NAN+ +G+IE+   ++ +L+ +   P  +  +  
Sbjct: 61  KAAEEIRNEFCIRVTGKVRPRPAGTENANLTSGKIEVLCHELTVLNPSVTPPFQL-DDDN 119

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+ R  +R LDLRR  +  N+  R ++   +R  + A+ FI+  TP+L  S+PEGARD
Sbjct: 120 LSETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKFLDAQGFIDIETPMLGKSTPEGARD 179

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D 
Sbjct: 180 YLVPSRVNPGHFFALPQSPQIFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDC 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E+++R VF+   + + +   F  + + +A+ R+G+DKPDLR  +  
Sbjct: 239 ETSFLTEQEIRDLFEDMMRTVFKNAIDVD-LDAKFPVMEFREAMARFGSDKPDLRVKLEF 297

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +TE     +F+VFS   + + G  V      GG  +R   D   ++    G  GLA+I
Sbjct: 298 TELTEVMKDVDFKVFSGPANSDNGRVVGLRVPGGGAISRGEIDAYTQFVGIYGAKGLAWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
                  G      P+ K+L+      I  R   QDGD  FF A D  K  + +  A R 
Sbjct: 358 KVNEVAKGRDGLQSPIVKNLHDAAIAEILKRTGAQDGDIIFFGA-DKAKVVNDSIGALRL 416

Query: 419 HIAQ-ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
            I   + G  N    + ++  W++DFP +E++EE+ +    H+PFT P+         D 
Sbjct: 417 KIGHSDFGKANGLFEDAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDP 476

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               A  YD+V NG+E+  G +R   S++  + F  + I+ E    +FG L  A Q G P
Sbjct: 477 GKCLAKAYDMVLNGWEMGGGSVRIFRSDIQSKVFRALKINDEEARAKFGYLLDALQYGAP 536

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PHGG+A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS+V  +QLREL +R+
Sbjct: 537 PHGGLAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSSVDEKQLRELHIRL 593


>gi|296110400|ref|YP_003620781.1| aspartate--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295831931|gb|ADG39812.1| aspartate--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 591

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 218/593 (36%), Positives = 332/593 (55%), Gaps = 10/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT   G +  S +G  V LSGWV + R  G +IF+D+RD  GI Q+  N  +A    +A+
Sbjct: 3   RTTYAGLIDDSFLGQTVTLSGWVQKRRDFGDLIFVDLRDREGIVQLTFNATNASALAVAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+V+ I GLV+SR A  +N  I +G +E+   + +IL+ ++  P  +       E 
Sbjct: 63  DMRNEYVVAITGLVVSRDASQLNEKIRSGSVEIDVTEAKILATSKTPPFYIEDGVNANEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           ++ +YR+LDLRR  + KN+  R++I++S    M   +FI   TPIL  S+PEGARD+LVP
Sbjct: 123 LKLQYRYLDLRRPEMQKNLRIRSKIMSSAIHFMDNHDFINIETPILAKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+  GSFYALPQ+PQ +KQLLM +GFDRYFQIA  FRDED R DR P EF Q+D+E SF
Sbjct: 183 SRIFPGSFYALPQSPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQP-EFTQMDVETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D+I   +   ++ +  +  +    ++    + + +++ R+GTDKPDLR    + ++T
Sbjct: 242 MSADEIRELVNEWVKAMMHDVVDFELDTSKIPTLTWQESMARFGTDKPDLRIAYELKDLT 301

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
                SEF VF+  +      +  A+P      +R   D++ ++    G  GLA++  ++
Sbjct: 302 TIMASSEFGVFANAVKAGGVVKAIAVPGGAEHYSRKNIDKLAQYIERFGAKGLAWL--KV 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G     GP+AK         +    D Q GD   F AG      +     R   A++
Sbjct: 360 TDDGLT---GPIAKFFPEEAANKLIAAADAQSGDLLLFGAGRADVVAATLDYLRRQTAED 416

Query: 424 LGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL-KGNDLLSIKAF 480
           L ++N  N + F WI+D+P +E++E+  +   AH+PFTMP +  +  L  G D     A 
Sbjct: 417 LDLVNSENPWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPNEEDLHYLDDGEDPHQAHAQ 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+ SG IR H  ++  +    +G + E     FG L      G PP GGIA
Sbjct: 477 SYDLVLNGYELGSGSIRIHRMDIQEKMLKALGFTPEAAHEAFGFLLEGMNYGFPPMGGIA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR+ MLL G +N+REV  FP +    + +  +P+ V  +QL +LGL + E
Sbjct: 537 LGLDRLAMLLAGQENIREVIAFPKNSRATEPMTEAPTRVGQKQLNDLGLFVPE 589


>gi|255536117|ref|YP_003096488.1| aspartyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255342313|gb|ACU08426.1| Aspartyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 584

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 215/592 (36%), Positives = 342/592 (57%), Gaps = 17/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61
           +RTH+ G+L ++++   V LSGWV  +R  G +I++D+RD YGITQ+V + D +  E+  
Sbjct: 2   FRTHTNGELSLTNINENVTLSGWVQTIRDKGFMIWIDLRDRYGITQLVFDQDRSSVELLE 61

Query: 62  -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AK +  E+V+ ++G V+ R+++  N  I TG IE+  +K+ +L+ ++  P  +  E + 
Sbjct: 62  NAKKLGREFVIQVEGKVIERTSK--NPKIPTGGIEILVEKLTVLNESQLPPFTIEDETDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR+ +   ++ R ++   +R  +  +NFIE  TP+L  S+PEGARDF
Sbjct: 120 GEELRMKYRYLDIRRNPVKDKLIFRHKMAQKVRNYLSDQNFIEVETPVLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQLLM  G DRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNPGQFYALPQSPQTFKQLLMIGGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+D+L   E +   + ++ ++       F R+ + DA+++YG DKPD+R  +   
Sbjct: 239 MAFVEQEDVLEIFEGMTATLLKDITSKEF--GKFPRMTFADAMQKYGNDKPDIRFGMEFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
            V E     +F++F +         V  I  +G     R   D + +W + + Q G + +
Sbjct: 297 EVNELVQGKDFKIFDE------AELVVGINVEGCADYTRKQIDELIDWVK-RPQIGASGM 349

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            W   ++  V     V K  +  N + I  +   ++GD    ++G+  K  +  +  R  
Sbjct: 350 IWVKYQNDGVV-TSSVNKFYSEENLKKITEKFGAKEGDLILLMSGNENKVRTQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +   LG+ N   F   W++DFP  EW+EE  +    H+PFT P+     L  +D    +A
Sbjct: 409 LGNRLGLRNSKEFAPLWVIDFPLLEWDEETGRYHAMHHPFTSPKPEDVHLLESDPGKARA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G +R    ++  + F  +G +KE  E +FG L  AF+ G PPH G+
Sbjct: 469 NAYDLVLNGNEIGGGSVRIFDKDLQSKMFDLLGFTKEDAEAQFGFLMNAFKYGAPPHAGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G DR+V +L G + +R+   FP + +  D+++ +PS ++ EQL EL L++
Sbjct: 529 AFGFDRLVAILDGNEVIRDYIAFPKNNSGRDVMIDAPSYIANEQLDELYLKV 580


>gi|163786609|ref|ZP_02181057.1| aspartate--tRNA ligase [Flavobacteriales bacterium ALC-1]
 gi|159878469|gb|EDP72525.1| aspartate--tRNA ligase [Flavobacteriales bacterium ALC-1]
          Length = 584

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 219/599 (36%), Positives = 334/599 (55%), Gaps = 31/599 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
           YR+H+CG+L  +   + V LSGWV  VR  G +I++D+RD YGITQ+  + + +     E
Sbjct: 2   YRSHNCGELRTAHSNTEVTLSGWVQGVRDKGFMIYVDLRDRYGITQLYFDEEQSSKTLLE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +  E+V+ + G V  R ++  N NI TG IE+   ++ IL+ +   P  +  + + 
Sbjct: 62  QAQKLGREFVIQVKGKVQERISK--NPNIPTGDIEVLVSELNILNASLVPPFTIEDKTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LD+RR+ + ++++ R ++   +R  +  + FIE  TP L  S+PEGARDF
Sbjct: 120 GDDLRMKYRYLDIRRNPVKESLIFRAKVTQEVRNYLSGDGFIEVETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGEFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DILN  E + R + +E  NG  +   F R+ YDDA+R YG DKPD+R  +   
Sbjct: 239 MAFVEQEDILNVFEGLTRHLLKEV-NGVEIE-KFPRMLYDDAMRLYGNDKPDIRFGMEFG 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
            +     H +F VF      N    V  I   GG    R   D++ +W +      L  +
Sbjct: 297 ELNAVTQHKDFNVF------NNAELVVGIAVPGGNSYTRKEIDKLIDWVKRPQVGALGMV 350

Query: 360 FWRLDESGNVAG-------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
           + R ++ G+             +AK   +   +A         GD    ++G+  K  + 
Sbjct: 351 YSRCNDDGSYKSSVDKFYDQDDLAKWAEVTGAKA---------GDLICVLSGETNKVRAQ 401

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
            +  R  +A+ +G+ +   F   W++DFP  E +EE       H+PFT P+ G   L   
Sbjct: 402 LSALRMELAERIGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDT 461

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
               +KA  YDLV NG EI  G IR H   +      ++G S+E    +FG L  AF+ G
Sbjct: 462 KPGEVKANAYDLVLNGNEIGGGSIRIHDKAIQAIMLKHLGFSEEEARAQFGFLMDAFEYG 521

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            PPHGG+A G+DR+V +L G + +R+   FP + +  D+++ +P+ +  EQL EL L++
Sbjct: 522 APPHGGLAFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAPIDDEQLEELSLKL 580


>gi|218709098|ref|YP_002416719.1| aspartyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254781762|sp|B7VMI0|SYD_VIBSL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218322117|emb|CAV18230.1| Aspartyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 592

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 230/597 (38%), Positives = 332/597 (55%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG+L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD    F IA 
Sbjct: 2   RTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMKDIFPIAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ +   G V  R    +N ++ TG++EL A  +EI++ +E LPL     +   E 
Sbjct: 62  QLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELYATGLEIINRSEALPLDF--NQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R KYR++DLRR  +   I  R R  + +R R + EN F++  TP+LT ++PEGARD+LV
Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVR-RFLDENLFLDIETPVLTKATPEGARDYLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E S
Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+   ++ N  E ++  +++E  +       F  + + +AIRR+G+DKPDLRNP+ + +V
Sbjct: 238 FLTSQEVRNVTEKLVHDMWKELLDVEL--GQFPVMPFSEAIRRFGSDKPDLRNPLELVDV 295

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VFS   +   G  V  I   GG    R   D   E     G  GLA++  
Sbjct: 296 ADLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAKLTRKQIDGYAEHVNIYGAKGLAWMKV 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
               +G      PVAK L+      I  R   + GD   F A             R  + 
Sbjct: 355 NDRAAGMEGIQSPVAKFLSEDVINGILDRTQAESGDIILFGADKAGIVAEAMGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
            +L + + + +   W++DFP +E  + E  +   H+PFT P G   E LK N   +  + 
Sbjct: 415 TDLELTDTSAWAPLWVVDFPMFE-EDGEGNLHAMHHPFTSPLGVNAEELKANP-AAANSD 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHSAEMQTAVFGILGIEAKEQQEKFGFLLEALKYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+ MLL G +N+R+V  FP +     LL  +PS  +   L EL + +    KK
Sbjct: 533 FGLDRLAMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAVKLAEKK 589


>gi|90411660|ref|ZP_01219670.1| aspartyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90327550|gb|EAS43903.1| aspartyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 597

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 225/599 (37%), Positives = 340/599 (56%), Gaps = 11/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD    FE+A 
Sbjct: 2   RTQYCGHLNKSFEGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDVFELAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V  R    +N  + TG++E+ A  +EI++ ++ LPL     +   E 
Sbjct: 62  QLRNEFCIRLIGEVRVRPESQVNKKMATGEVEILATGLEIINRSDVLPLDF--NQNNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R K+R+LDLRR  +   I  R +  + +R R + EN F++  TP+LT ++PEGARD+LV
Sbjct: 120 QRLKFRYLDLRRPEMSDRIKLRAKASSFVR-RFLDENAFLDIETPVLTKATPEGARDYLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E S
Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  + +    E ++  +++E  N +     F  + +++A+RR+G+DKPDLRNP+ + +V
Sbjct: 238 FMSAEQVRGMTEKMITEMWKELLNVDL--GTFPIMPFEEAMRRFGSDKPDLRNPLELVDV 295

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     +F+VFS   +   G  V  I   GG   +R   D   ++    G  GLA++  
Sbjct: 296 ADILKDVDFKVFSGPANDEKG-RVAVIRVPGGASLSRKQIDEYTKFVGIYGAKGLAWMKV 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E+G      PVAK LN      +  R   Q GD   F A             R  + 
Sbjct: 355 NDREAGFAGVQSPVAKFLNEEVVATLLDRTQAQTGDIILFGADSKRVVTEAMGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L + + + ++  W++DFP +E  ++E  +   H+PFT P G        +  +  +  
Sbjct: 415 EDLELTDKSAWKPLWVIDFPMFE-EDDEGNLHAMHHPFTSPLGITAEELAVNPAAANSNA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H +E+    FS +GI +   +++FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHNAEMQSAVFSILGIEEGEQQSKFGFLLEALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           G+DR+VMLL G  N+R+V  FP +     LL  +PS  + E L+EL + +    K+  K
Sbjct: 534 GLDRLVMLLCGTDNIRDVIAFPKTTAASCLLTNAPSLANPESLKELSIAVAIAKKETDK 592


>gi|323345167|ref|ZP_08085391.1| aspartate--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323094437|gb|EFZ37014.1| aspartate--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 589

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 217/597 (36%), Positives = 343/597 (57%), Gaps = 25/597 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT++CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   +    + 
Sbjct: 2   YRTNTCGELRLSDAGKQVTLAGWVQRTRKMGGMTFVDLRDRYGITQLVFNEADNRELCDN 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + + G V  R ++  NA + TG +E+   +  +LS +   P  +  + +  
Sbjct: 62  ANKLGREYCIQVRGTVSERQSK--NAKMETGDVEILVTEFVVLSESATPPFKIEDDTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  + KN+  R R+   +R  + +  FIE  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRPAVRKNLELRHRMTILIRNFLDSHRFIEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D+++  E++ R +F+E   G  + +   ++ + DA++R+G+DKPD+R  +    
Sbjct: 239 SFVDQEDVISLFEDMARHLFKEI-RGVNLPDKLQQMTWYDAMKRFGSDKPDIRFGMEFVE 297

Query: 302 VTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           + +    S EF VF+     N  Y +  I   GG   +R   + + ++ +         +
Sbjct: 298 MMDILKGSGEFSVFN-----NAEY-IGGICVPGGADYSRKQLNELTDFVKRPQIGAQGLV 351

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-----PLKFCSFAA 414
           F + +  G V   G + K       E+++ +   +DGD    + GD       + C+   
Sbjct: 352 FVKYNTDGTVK--GSIDKFYTPAVLESLKEKTGAKDGDLVLILCGDNANKVRTQLCAL-- 407

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  + + L + + N FE  WI+DFP +EW++EE+++   H+PFTMP      L     
Sbjct: 408 --RLEMGERLRLRDKNKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLEEHP 465

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YD VCNG E+  G +R H  ++  + F  +G + E    +FG L  AF+ G P
Sbjct: 466 ERVRAKAYDFVCNGIEVGGGSLRIHDGKLQEKMFKILGFTPERAMAQFGFLINAFKYGAP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PH G+A G+DR V ++ G  ++R+   FP + +  D+++ +PS +  +QL EL +++
Sbjct: 526 PHAGLAFGLDRFVAIMAGLDSIRDCIAFPKNNSGRDVMLDAPSEIDDKQLDELQIKV 582


>gi|145636549|ref|ZP_01792217.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145270374|gb|EDK10309.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 588

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 220/591 (37%), Positives = 334/591 (56%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQEALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ + + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRVYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++            F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + EF+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKNVEFKVFNEPAN-NPNGRVAVIRVPNGTEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    +A+  R+  Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPIAKFLNEDVWKALAERVKAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+   + ++  W++DFP +E  ++E  +   H+PFT P+         D  S  A  Y
Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDDEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+
Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586


>gi|183221477|ref|YP_001839473.1| aspartyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911564|ref|YP_001963119.1| aspartyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|238687780|sp|B0SB35|SYD_LEPBA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238687852|sp|B0SSV7|SYD_LEPBP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167776240|gb|ABZ94541.1| Aspartate--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779899|gb|ABZ98197.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase; AspRS)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 601

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 233/610 (38%), Positives = 336/610 (55%), Gaps = 49/610 (8%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSV 65
           S   +  + VG  + LSGW  R R  GG+IF+D+RD  GI Q+VA  +     F   + +
Sbjct: 14  SATSVSDASVGKTLFLSGWAFRYRDQGGVIFIDLRDRSGILQIVARKEILGDDFSKVEKI 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           RSE+V+ + G +  R A++IN  + TG+ EL A+ +EIL+ ++  P  +       E IR
Sbjct: 74  RSEFVIAVKGKLSLRDADSINPKMETGKYELIAESVEILNSSKTPPFTLDEFDPSGEEIR 133

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            KYR+LD+RR+ L   +V R ++  ++R  + +++F+E  TPIL  S+PEGARDFLVPSR
Sbjct: 134 LKYRYLDMRREELRDRLVLRHKLTFALREYLDSKSFLEIETPILNKSTPEGARDFLVPSR 193

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           +N G FYALPQ+PQ +KQ+LM  G +RYFQI  CFRDED R+DR P EF QLDME SFV 
Sbjct: 194 LNAGEFYALPQSPQLFKQILMIGGMERYFQIVKCFRDEDLRADRQP-EFTQLDMEFSFVT 252

Query: 246 QDDILNTMENV----LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++DI   +E +    L+ VF+       V+  F+ + Y  A+  YG+DKPD+R  + + N
Sbjct: 253 EEDIRREIEAMWAFALKKVFQ-----LEVNAPFMTMPYHVAMEEYGSDKPDIRFGMKLVN 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEW-ARSQGQPGLAYI 359
           V+EH    +F+VF+   ++  G  V AI   GG   +R   + +  W +R     GLAY+
Sbjct: 308 VSEHVKSCDFQVFTG--AITSGGVVKAICVPGGSVISRKEIEDLTAWLSRDYRAKGLAYM 365

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                + G       + K  +    EAI   +  ++GD  F           F AD+   
Sbjct: 366 -----KHGANGLESTITKRFSPEALEAIAKAVGSKEGDMVF-----------FGADSSKI 409

Query: 420 IAQELGIINCNC----------FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG----- 464
           +   LG +              + F W++DFP +E +E  K   F H+PFT P+      
Sbjct: 410 VNASLGALRLKLSEKYDPPKVPYSFHWVVDFPMFEIDETTKSWTFLHHPFTSPKEEDFQK 469

Query: 465 --GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
               +  K  DL SI A  YDLV NG EI  G IR H  E+       +GI +E  +++F
Sbjct: 470 LRDWKDGKEVDLSSIGAKAYDLVLNGTEIGGGSIRIHNPEIQSLVLEAIGIGEEDAKSKF 529

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           G L  A   G PPHGGIA G+DRI+MLL G  ++R+V  FP +Q    ++  +P  V  +
Sbjct: 530 GFLLDALSFGAPPHGGIAFGVDRIMMLLTGGTSIRDVIAFPKTQKGTCMMSEAPGPVEAK 589

Query: 583 QLRELGLRIV 592
           QL EL LR+V
Sbjct: 590 QLEELKLRVV 599


>gi|119944470|ref|YP_942150.1| aspartyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166225379|sp|A1SST6|SYD_PSYIN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119863074|gb|ABM02551.1| aspartyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 592

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 225/599 (37%), Positives = 352/599 (58%), Gaps = 14/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG++  + +G  ++L GW+++ R  GG+IFLD+RD  GI QV  + D+     +A 
Sbjct: 2   RTMYCGEVTEAVLGQEIQLVGWINKQRDLGGVIFLDMRDRAGIVQVFFDADTPIATALAT 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +VR+E+ + I GLV +R    +N ++ TG IE+   ++EIL+ +E  PLP+   ++  E 
Sbjct: 62  TVRNEFCIQIKGLVRARPEGQVNKDMTTGGIEILGLELEILNRSE--PLPLDSNQQNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  + K +  R ++ + +R  +  ++F++  TPILT ++PEGARD+LVP
Sbjct: 120 QRLRYRYLDLRRPEMAKRMQFRAKVSSFVRRFLDDQDFLDVETPILTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRTHKGKFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D ++   E ++  +F+E  N +    NF ++ Y +A+RR+G+DKPDLR    +++V 
Sbjct: 239 MNADQVMEISEEMIVKLFKEMLNVDL--GNFPKMTYAEALRRFGSDKPDLRIDFELYDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VFS   + +P   V  I   GG   +R   D   ++    G  GLA++   
Sbjct: 297 DLMKDVEFNVFSGPAN-DPDSRVAVICVPGGAKLSRKNIDEYGKFVTIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK LN      + +R   +DGD   F   D     S A  A R  +A
Sbjct: 356 EVAKGLEGVQSPVAKFLNEEIVTELLIRTGAKDGDIILF-GADKSNIVSEAIGALRLKVA 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           Q+LG++  + ++  W++DFP +E   ++  +   H+PFT P G  +E L+ N + +I + 
Sbjct: 415 QDLGLVK-DQWKPLWVIDFPMFE-PLDDGGLTPLHHPFTAPIGLTVEELEANPVGAI-SN 471

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H  ++    F  + IS E  E++FG L  A + G PPH G+A
Sbjct: 472 AYDMVLNGCELGGGSVRIHKQDMQAAIFRILKISDEEAEDKFGFLLEALKYGAPPHAGLA 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
            G+DR+VML+ G  ++R+V  FP + +    L  +PS  +   L EL + +V +PKK++
Sbjct: 532 FGLDRLVMLMTGTSSIRDVIAFPKTASAACPLTNAPSFANPAVLAELNVAVVADPKKVI 590


>gi|238693264|sp|B4RXE7|SYD_ALTMD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 586

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 221/597 (37%), Positives = 351/597 (58%), Gaps = 21/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG++  S +G  V L GWV++ R  GG+IF+D+RD  GI QVV +PD      +A 
Sbjct: 2   RTDYCGNIDSSYIGQEVTLCGWVNKRRDLGGVIFIDLRDREGIVQVVFDPDLPEVLSVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+ + + G V +R    IN ++ TG+IE+    +E+++ A+ LPL     +E  E 
Sbjct: 62  TLRSEFCVKLTGKVRARPEGQINKDMRTGEIEILGTGLEVINKADVLPLD--WNQENSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  + + +  R ++  ++R  +  E F++  TPILT ++PEGARD+LVP
Sbjct: 120 QRLRYRYLDLRRPVMSQRLQFRAKVTGAVRRFLEEEGFLDIETPILTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D+E +F
Sbjct: 180 SRTHKGEFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETTF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++ D +++  E ++R +F +  + +    +F R+ Y +A++R+G+DKPDLRNP+ + +V 
Sbjct: 239 LDADGVMSITERMIRDLFNKMLDVDL--GDFPRMTYAEAMKRFGSDKPDLRNPLELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + +F+VFS   + +P   V AI   GG   +R   D   ++    G  GLA+I  +
Sbjct: 297 DLLANVDFKVFSGPAN-DPKGRVAAIRVPGGASLSRKQIDEYTKFVGIYGAKGLAWI--K 353

Query: 363 LDESGNVAGM----GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           ++++G  AG+     P+ K L    T AI  R   Q GD   F A             R 
Sbjct: 354 VNDAG--AGLEGLQSPILKFLTEDITNAILERTGAQSGDILLFGADSYTVVTEAMGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSI 477
            + ++  ++    ++  W++DFP +E  E + ++   H+PFT P+G   + LK N   ++
Sbjct: 412 KLGEDFELLEGE-WKPLWVVDFPMFE--EFDGQLHAIHHPFTAPRGLTPDELKANPAEAL 468

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
               YD+V NG E+  G +R H  ++    F+ +GI  E  +N+FG L  A + G PPH 
Sbjct: 469 SD-AYDMVLNGVELGGGSVRIHNEDMQSTVFNILGIDDEEAKNKFGFLLDALRFGAPPHA 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G+DR+VML+ GA ++R+V  FP +      L  +PS  + +QL EL +  V+ 
Sbjct: 528 GLAFGLDRLVMLMTGATSIRDVMAFPKTTTAACPLTSAPSPANPQQLEELAIATVKK 584


>gi|312797300|ref|YP_004030222.1| aspartyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312169075|emb|CBW76078.1| Aspartyl-tRNA synthetase (EC 6.1.1.12) [Burkholderia rhizoxinica
           HKI 454]
          Length = 626

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 225/594 (37%), Positives = 334/594 (56%), Gaps = 12/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 30  RSEYCGRVTEKLLGQSVSLCGWVHRRRDHGGVIFIDLRDCEGLVQVVCDPDRPDMFKTAE 89

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR E+ + + G+V +R   T+NAN+ +GQIE+   ++ +L+V+   P  +  E    E+
Sbjct: 90  GVRHEFCVRVVGIVRARPEGTLNANLTSGQIEVLCHELTVLNVSVTPPFQLDDE-NLSET 148

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 149 TRLTHRVLDLRRPQMQHNLRLRYRVAMESRKYLDEQGFIDIETPMLTKSTPEGARDYLVP 208

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 209 SRVNAGMFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 267

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+   +   +++ F  + + +A+RR+G+DKPDLR  +    +T
Sbjct: 268 LNEQEIRDLFEAMIRHVFKTTIDVE-LADPFPVMQHAEAMRRFGSDKPDLRVKLEFTELT 326

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D   ++ R  G  GLA+I    
Sbjct: 327 DVMKDVDFKVFSTPANTKDGRVAALRVPNGAELTRGDIDGYTDFVRIYGAKGLAWIKVNE 386

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------R 417
              G      P+ K+L+     AI  R   QDGD  FF   D  K  + +  A       
Sbjct: 387 VAKGRDGLQSPIVKNLHDACIAAILERTGAQDGDILFF-GADRAKVVNDSLGALRLKIGH 445

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +   ++ G++    ++  W++DFP +E+++E+ +   AH+PFT P+         D    
Sbjct: 446 SAFGRDAGLVE-QGWKPLWVIDFPMFEYDDEDNRWVAAHHPFTSPKDEHLEYLEVDPGRC 504

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R H  +V  + F  + I  E    +FG L  A Q G PPHG
Sbjct: 505 LAKAYDMVLNGWEIGGGSVRIHREDVQSKVFRALKIGPEEARAKFGFLLDALQYGAPPHG 564

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLR+L +R+
Sbjct: 565 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSEVDERQLRDLHIRL 618


>gi|16272271|ref|NP_438483.1| aspartyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260581215|ref|ZP_05849034.1| aspartyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174503|sp|P43817|SYD_HAEIN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|1573287|gb|AAC21981.1| aspartyl-tRNA synthetase (aspS) [Haemophilus influenzae Rd KW20]
 gi|260092140|gb|EEW76084.1| aspartyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 588

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 221/591 (37%), Positives = 333/591 (56%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPDNQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++            F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    + +  R++ Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPIAKFLNEDVWKGLAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+   + ++  W++DFP +E  +EE  +   H+PFT P+         D  S  A  Y
Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+
Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586


>gi|145640262|ref|ZP_01795846.1| aspartyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145274848|gb|EDK14710.1| aspartyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 588

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 221/591 (37%), Positives = 334/591 (56%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++            F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEIVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVVVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    +A+  R++ Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+   + ++  W++DFP +E  +EE  +   H+PFT P+         D  S  A  Y
Sbjct: 417 DLGLTRLDEWKPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+
Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586


>gi|26553741|ref|NP_757675.1| aspartyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|38372528|sp|Q8EWB7|SYD_MYCPE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|26453748|dbj|BAC44079.1| aspartyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 580

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 222/586 (37%), Positives = 336/586 (57%), Gaps = 19/586 (3%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           CG++    VG  V + GW+ + R  G +IF+DI D  GI QVV   ++  F        E
Sbjct: 9   CGNVDNKLVGKEVVIKGWIKKNRKLGSLIFIDIYDITGIVQVVVEEENKFFNNCLQTPKE 68

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G+V  RS   +N  + TG+ E+  ++ ++ S AE  P  +  + +  E +R KY
Sbjct: 69  SVVEVIGIVRKRS--NVNKELKTGEFEIDLKEFKLYSKAETPPFLIQDDTDGLEDLRLKY 126

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR  +  NI+ R +IIN  R  ++  NF E  TP L+  +PEGARD+LVP+R  +
Sbjct: 127 RYLDLRRPVMQNNIINRGKIINLFRSFLVKNNFNEIETPYLSKQTPEGARDYLVPTRSKK 186

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             F+ALPQ+PQ YKQLLM SG DRYFQIA CFRDED R+DR P EF Q+D+E SF+   +
Sbjct: 187 --FFALPQSPQIYKQLLMVSGMDRYFQIARCFRDEDLRADRQP-EFTQIDIETSFLSDLE 243

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I + ++ +   VF+EF N   +   F R+ Y DAI  YG+DKPD+R    + N+T +F  
Sbjct: 244 IQSIVQEMFIYVFKEFFNIK-LKTPFTRMSYSDAIEYYGSDKPDIRFENKIMNLTNYFKD 302

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           + F++F  I        + A+  +     +    ++ + A+     GLAY++    E+G 
Sbjct: 303 TNFKIFKSIYE--SKNRISAVFVEDNIVKQD-IKKLEKLAQDNKAKGLAYLYI---ENGK 356

Query: 369 VAGMGPVAKHLNIVNTEAI-RVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGI 426
           ++  G +A   N++ +E I ++  D +  +   F   D  +    A  A R         
Sbjct: 357 MSS-GSIA---NVIESEIIEKICKDNKLSNGTLFFVADKYEITQQALGAIRKEFVNISKK 412

Query: 427 INCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           I  N  F F W++D+P +E++EEEK+   AH+PFTMP          D  + KA  YDLV
Sbjct: 413 IKMNEEFAFLWVVDWPLFEYSEEEKRYVSAHHPFTMPTAETLDTFDKDPANAKAIAYDLV 472

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
            NGFEI  G +R + SE+  + F  +G++   V+ +FG +  AF+ G+PPHGGIA GI+R
Sbjct: 473 LNGFEIGGGSLRIYNSELQTRMFKFLGLNDSQVKEKFGFIINAFKYGVPPHGGIAFGIER 532

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           I+M++L   ++R+V  FP + +  DLL  +PS VS E L+ELG+++
Sbjct: 533 ILMIMLNTNSIRDVIAFPKNSSGVDLLFETPSDVSNESLKELGIKL 578


>gi|73540145|ref|YP_294665.1| aspartyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|97196830|sp|Q475W2|SYD_RALEJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|72117558|gb|AAZ59821.1| aspartyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 602

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 223/598 (37%), Positives = 338/598 (56%), Gaps = 12/598 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CF 59
           M   RTH CG +     G  V L+GWV R R HGG+IF+D+RD  G+ QVV +PD    F
Sbjct: 1   MSSMRTHYCGLVTEQLSGQEVALTGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A+ +R+E+ + I G V  R A T N N+ +G+IE+   ++ +L+ +   P  +  +  
Sbjct: 61  KAAEEIRNEYCIRITGKVRPRPAGTENTNLTSGKIEVLCYELTVLNPSVTPPFQL-DDDN 119

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+ R  +R LDLRR  +  N+  R ++   +R  + A+ FI+  TP+L  S+PEGARD
Sbjct: 120 LSETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDAQGFIDIETPMLGKSTPEGARD 179

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D 
Sbjct: 180 YLVPSRVNPGHFFALPQSPQIFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDC 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E+++R VF+   + + +   F  + + +A+ R+G+DKPDLR  +  
Sbjct: 239 ETSFLTEQEIRDLFEDMMRTVFKNAIDVD-LDAKFPVMEFREAMARFGSDKPDLRVKLEF 297

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +T+     +F+VFS   + + G  V      GG  +R   D   ++    G  GLA++
Sbjct: 298 TELTDVMKDVDFKVFSGPANSDNGRVVGLRVPGGGAISRGEIDAYTQFVGIYGAKGLAWV 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA--- 416
                  G      P+ K+L+      I  R   QDGD  FF A D  K  + A  A   
Sbjct: 358 KVNEVAKGRDGLQSPIVKNLHDAAITEILKRTGAQDGDIIFFGA-DKAKVVNDAIGALRL 416

Query: 417 ---RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               +   +  G+   + ++  W++DFP +E++EE+ +    H+PFT P+         D
Sbjct: 417 KIGHSEFGKASGLFE-DVWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHMQYLETD 475

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                A  YD+V NG+E+  G +R + S++  + F  + I+ E    +FG L  A Q G 
Sbjct: 476 PGKCIAKAYDMVLNGWEMGGGSVRIYRSDIQSKVFRALKINDEEARAKFGYLLDALQYGA 535

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+
Sbjct: 536 PPHGGLAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSAVDEKQLRELHIRL 593


>gi|145628668|ref|ZP_01784468.1| aspartyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145638770|ref|ZP_01794379.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|144979138|gb|EDJ88824.1| aspartyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145272365|gb|EDK12273.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309750260|gb|ADO80244.1| Aspartyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 588

 Score =  389 bits (998), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 221/591 (37%), Positives = 333/591 (56%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++  ++            F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHDLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    +A+  R++ Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+   + ++  W++DFP +E  +EE  +   H+PFT P+         D  S  A  Y
Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+
Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586


>gi|269138786|ref|YP_003295487.1| aspartyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267984447|gb|ACY84276.1| aspartyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304558778|gb|ADM41442.1| Aspartyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 591

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/591 (38%), Positives = 340/591 (57%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT+ CG L +S VG  V L GWVHR R  GG+IF+D+RD  G+ QV  +PD    F  A 
Sbjct: 2   RTNYCGQLNLSHVGQEVTLCGWVHRRRDLGGLIFIDLRDREGVVQVFFDPDHQDAFRQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R     N ++ TG IE+    + I++ AE  PLP+   +   E 
Sbjct: 62  ELRNEFCVQITGTVRARPESQRNRDMSTGDIEVFGNGLNIINRAE--PLPLDFNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I   +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 NRLKYRYLDLRRPEMAERLKTRAKITAFVRRFMDGHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME + R ++ E    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSAEQVREIMEALARALWMEIKGVDL--GDFPVMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + +F+VFS   +   G  V A+   GG    R   D   ++    G  GLA++   
Sbjct: 297 DLVKNVDFKVFSGPANDAKG-RVIALRVPGGATLTRKNIDEYGQFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK LN    EAI  R   Q GD  FF A D  K  + A  A R  + 
Sbjct: 356 DRAAGMEGVQSPIAKFLNDEVLEAILARSGAQSGDIIFFGA-DSAKVATDAMGALRLKVG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++L + + + +   W++DFP +E  + E  +   H+PFT P+    E+LK N + +I A 
Sbjct: 415 RDLQLTDESRWAPLWVVDFPMFE-EDGEGGLAAMHHPFTSPRDISPEALKANPVGAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H   +    F  +GI+++    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVMNGYEVGGGSVRIHSGAMQSAVFDILGINEQEQREKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G +N+R+V  FP +      L  +PS  +   L+EL + +
Sbjct: 533 FGLDRLVMLLTGTENIRDVIAFPKTTAAACPLTDAPSRANPASLQELSIAV 583


>gi|113866482|ref|YP_724971.1| aspartyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|123134433|sp|Q0KEG8|SYD_RALEH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|113525258|emb|CAJ91603.1| Aspartyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 602

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 226/597 (37%), Positives = 340/597 (56%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CF 59
           M   RTH CG +     G  V L+GWV R R HGG+IF+D+RD  G+ QVV +PD    F
Sbjct: 1   MSSMRTHYCGLVTEQFSGQEVALTGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A+ +R+E+ + + G V  R A T NAN+ +G+IE+   ++ +L+ +   P  +  +  
Sbjct: 61  KAAEEIRNEFCIRVTGKVRPRPAGTENANLTSGKIEVLCHELTVLNPSVTPPFQL-DDDN 119

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+ R  +R LDLRR  +  N+  R ++   +R  + A+ FI+  TP+L  S+PEGARD
Sbjct: 120 LSETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKFLDAQGFIDIETPMLGKSTPEGARD 179

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D 
Sbjct: 180 YLVPSRVNPGHFFALPQSPQIFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDC 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E+++R VF+   + + +   F  + + +A+ R+G+DKPDLR  +  
Sbjct: 239 ETSFLTEQEIRDLFEDMMRTVFKNAIDVD-LDARFPVMEFREAMARFGSDKPDLRVKLEF 297

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +TE     +F+VFS   + + G  V      GG  +R   D   ++    G  GLA+I
Sbjct: 298 TELTEVMKDVDFKVFSSPANSDNGRVVGLRVPGGGAISRGEIDAYTQFVGIYGAKGLAWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
                  G      P+ K+L+      I  R   QDGD  FF A D  K  + +  A R 
Sbjct: 358 KVNEVAKGRDGLQSPIVKNLHDAAIAEILKRTGAQDGDIIFFGA-DKAKVVNDSIGALRL 416

Query: 419 HIAQ-ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
            I   + G  N    + ++  W++DFP +E++EE+ +    H+PFT P+         D 
Sbjct: 417 KIGHSDFGKANGLFEDTWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDP 476

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               A  YD+V NG+E+  G +R   S++  + F  + I+ +    +FG L  A Q G P
Sbjct: 477 GKCLAKAYDMVLNGWEMGGGSVRIFRSDIQSKVFRALNINDDEARAKFGYLLDALQYGAP 536

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PHGG+A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS+V  +QLREL +R+
Sbjct: 537 PHGGLAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSSVDEKQLRELHIRL 593


>gi|29346282|ref|NP_809785.1| aspartyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253568298|ref|ZP_04845709.1| aspartyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|46577253|sp|Q8A9E3|SYD_BACTN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|29338177|gb|AAO75979.1| aspartyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251842371|gb|EES70451.1| aspartyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 587

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/590 (38%), Positives = 340/590 (57%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           +RTH+CG+L +SDV   + LSGWV R R  GG+ F+D+RD YGITQ+V N +  +   + 
Sbjct: 2   FRTHTCGELRISDVNKQITLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCDR 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ I G V  R ++  NANI TG IE+   ++ +L+ A   P  +    +  
Sbjct: 62  ANKLGREFVIQITGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR+ +  N+  R ++   +R  + +  FIE  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI++T E + + +F+    G  ++  F R+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQEDIISTFEGMAKHLFKTL-RGVELTEPFQRMPWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y V  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDIMKGHGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419
            R++  G V     V K       + ++     + GD    ++GD  +K      + R  
Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  +++A
Sbjct: 410 MGSQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDAQLQARMFEILGFTPEKAQAQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSEIDQTQLDELNL 579


>gi|148827469|ref|YP_001292222.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166225349|sp|A5UGD3|SYD_HAEIG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148718711|gb|ABQ99838.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 588

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 222/591 (37%), Positives = 333/591 (56%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVYFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++ LPL     +   E 
Sbjct: 63  SLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++            F  + + +A+ R+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMCRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+AK LN    +A+  R++ Q GD  FF A             R  + +
Sbjct: 357 DINVGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+   + ++  W++DFP +E  +EE  +   H+PFT P+         D  S  A  Y
Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+
Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586


>gi|332879234|ref|ZP_08446931.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332682654|gb|EGJ55554.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 586

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 229/600 (38%), Positives = 346/600 (57%), Gaps = 31/600 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFE 60
           +RT++CG+L ++D G  V L+GWV RVR  GG+ F+D+RD YGITQ+V N    D+ C  
Sbjct: 2   FRTNTCGELRLADAGKTVTLAGWVQRVRKMGGMTFVDLRDRYGITQLVFNEEVNDALCAR 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K  R + V+ I G V  R  E+ N N+ TG+IE+   ++ +L+ +   P  +    + 
Sbjct: 62  ANKLGRED-VIQIKGEVNER--ESKNKNLPTGEIEIIVSELTVLNASATPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  + KN+  R ++   +R  + ++ F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRACVRKNLELRHQMTMEVRRYLDSKGFLEIETPMLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +G DRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D++   E + + +F     G  ++  F R+ + +A+R YG+DKPD R  +   
Sbjct: 238 MSFVEQEDVIALFEGMAKHLFRTI-RGIELTEPFPRMPWSEAMRLYGSDKPDTRFGMEFV 296

Query: 301 NVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWA-RSQ-GQPGL 356
            + +    + EF VF      N    +  I A G     R   D++ ++  RSQ G  GL
Sbjct: 297 ELMDVLKGTGEFSVF------NDASYIGGICAPGCASYTRKQLDQLTDFVKRSQIGAKGL 350

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ----DGDSCFFIAG-DPLKFCS 411
            Y   R+ E G+V         ++   T+ + +RL        GD    ++G D +K   
Sbjct: 351 VYA--RVQEDGSVKS------SVDKFYTQEVLLRLKETMKAVPGDLILIMSGEDVMKTRK 402

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
              + R  +   LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L  
Sbjct: 403 QLCELRLEMGSRLGLRDKNKFSLLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLD 462

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ++  +++A  YD+VCNG E+  G IR H  E+  + F  +G ++E  + +FG L  AF+ 
Sbjct: 463 SNPAAVRADAYDMVCNGVEVGGGSIRIHDPELQDKMFKILGFTEERAQEQFGFLMNAFKY 522

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G+DR V L  G  ++R+   FP + +  D+++ +PS +  +QL EL L +
Sbjct: 523 GAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSYIDQKQLDELNLAL 582


>gi|239995982|ref|ZP_04716506.1| aspartyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 586

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 220/597 (36%), Positives = 350/597 (58%), Gaps = 21/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG++  S +G  V L GWV++ R  GG+IF+D+RD  GI QVV +PD      +A 
Sbjct: 2   RTDYCGNIDSSYIGQEVTLCGWVNKRRDLGGVIFIDLRDREGIVQVVFDPDLPDVLSVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+ + + G V +R    +N ++ TG+IE+    +E+++ ++ LPL     +E  E 
Sbjct: 62  TLRSEFCVKLTGKVRARPEGQVNKDMRTGEIEILGTGLEVINKSDVLPLD--WNQENSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  + + +  R ++  ++R  +  E F++  TPILT ++PEGARD+LVP
Sbjct: 120 QRLRYRYLDLRRPVMSQRLQFRAKVTGAVRRFLEEEGFLDIETPILTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D+E +F
Sbjct: 180 SRTHKGEFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETTF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++ D +++  E ++R +F +  N +    +F R+ Y +A+ R+G+DKPDLRNP+ + +V 
Sbjct: 239 LDADGVMSITERMIRDLFNKMLNVDL--GDFPRMTYKEAMTRFGSDKPDLRNPLELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + +F+VFS   + +P   V AI   GG   +R   D   ++    G  GLA+I  +
Sbjct: 297 DLLANVDFKVFSGPAN-DPKGRVAAIRVPGGASLSRKQIDEYTKFVGIYGAKGLAWI--K 353

Query: 363 LDESGNVAGM----GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           ++++G  AG+     P+ K L    T A+  R   Q GD   F A             R 
Sbjct: 354 VNDAG--AGLEGLQSPILKFLTEDITNAMLERTGAQSGDILLFGADSYTVVTEAMGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSI 477
            + ++  ++    ++  W++DFP +E  E + ++   H+PFT P+G   E LK N   ++
Sbjct: 412 KLGEDFELLEGE-WKPLWVVDFPMFE--EFDGQLHAIHHPFTAPRGLTPEELKANPAEAL 468

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
               YD+V NG E+  G +R H  ++    F+ +GI  E  +N+FG L  A + G PPH 
Sbjct: 469 SD-AYDMVLNGVELGGGSVRIHNEDMQSTVFNILGIDDEEAKNKFGFLLDALRFGAPPHA 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G+DR+VML+ GA ++R+V  FP +      L  +PS  + +QL EL +  V+ 
Sbjct: 528 GLAFGLDRLVMLMTGATSIRDVMAFPKTTTAACPLTSAPSPANPQQLEELAIATVKK 584


>gi|145631434|ref|ZP_01787204.1| aspartyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144982971|gb|EDJ90480.1| aspartyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 588

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 221/591 (37%), Positives = 333/591 (56%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++  ++            F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHDLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    +A+  R++ Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+   + ++  W++DFP +E  +EE  +   H+PFT P+         D  S  A  Y
Sbjct: 417 DLGLTRLDEWKPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+
Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586


>gi|298385641|ref|ZP_06995199.1| aspartate--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298261782|gb|EFI04648.1| aspartate--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 587

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/590 (38%), Positives = 340/590 (57%), Gaps = 16/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           +RTH+CG+L +SDV   + LSGWV R R  GG+ F+D+RD YGITQ+V N +  +   + 
Sbjct: 2   FRTHTCGELRISDVNKQITLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCDR 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ I G V  R ++  NANI TG IE+   ++ +L+ A   P  +    +  
Sbjct: 62  ANKLGREFVIQITGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR+ +  N+  R ++   +R  + +  FIE  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI++T E + + +F+    G  ++  F R+ + DA++ YG+DKPDLR  +    
Sbjct: 239 SFVEQEDIISTFEGMAKHLFKTL-RGVELTEPFQRMPWADAMKYYGSDKPDLRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           + +      F VF      N  Y V  I A+G     R   D + E+ +         ++
Sbjct: 298 LMDIMKGYGFSVFD-----NAAY-VGGICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNH 419
            R++  G V     V K       + ++     + GD    ++GD  +K      + R  
Sbjct: 352 ARVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  +++A
Sbjct: 410 MGSQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAVRA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 470 DAYDMVVNGVEVGGGSIRIHDAQLQARMFEILGFTPEKAQAQFGFLMNAFKYGAPPHGGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L
Sbjct: 530 AYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSEIDQTQLDELNL 579


>gi|329945595|ref|ZP_08293328.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328528598|gb|EGF55563.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 559

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/571 (39%), Positives = 322/571 (56%), Gaps = 32/571 (5%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           + F+D+RD  GI QVV        EIA  +R+E+VL I G V +R     N N+ TG+IE
Sbjct: 1   MAFIDLRDASGIAQVVIRE-----EIAHDLRAEYVLAITGEVSARPEGNANPNLPTGEIE 55

Query: 96  LSAQKIEILSVAEELPLPVFGERE----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
           +    +EIL+ +  LP  V    E      E  R +YR+LDLRR ++   I  R+++  +
Sbjct: 56  VVVSDVEILNASAPLPFQVSDHAEDSGQVGEEARLRYRYLDLRRSSMQYAIRLRSKVSQA 115

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
            R  + + +F+E  TP LT S+PEGARDFLVP+R+  GS+YALPQ+PQ +KQLLM +G +
Sbjct: 116 ARRVLDSHDFVEIETPTLTRSTPEGARDFLVPARLTPGSWYALPQSPQLFKQLLMVAGME 175

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           RY+QIA C+RDED R+DR P EF QLD+EMSFVEQDD++   E+VLR V+     G  + 
Sbjct: 176 RYYQIARCYRDEDFRADRQP-EFTQLDVEMSFVEQDDVIAVAEDVLREVWALI--GYDLP 232

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
               R+ Y DA+ RYG+DKPDLR    + ++T+HF  + FRVF      NP      +P 
Sbjct: 233 TPIPRMTYRDAMERYGSDKPDLRFGCELVDLTDHFKDTTFRVFQ-----NPYVGAVVMPG 287

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL 391
                 R F D   EWA+ +G  GLAY+   + E G +   GPVAK++       +    
Sbjct: 288 GASQSRRTF-DAWQEWAKQRGAKGLAYV--TVGEDGTLG--GPVAKNITDTERAGLAQAT 342

Query: 392 DMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK 451
               GD  FF AG      +    AR  I +  G+I+ + + F W++D P ++ + E + 
Sbjct: 343 GADPGDCIFFAAGPVDSSRALLGAARLEIGKRCGLIDDDEWSFVWVVDAPLFKPSAEARA 402

Query: 452 I-DFA---------HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
             D A         H+ FT P+         D  +  A+ YD+VCNG EI  G IR H S
Sbjct: 403 DGDVALGKSAWTAVHHAFTSPKPECLDTFDTDPGNALAYAYDIVCNGNEIGGGSIRIHRS 462

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           +V  + F+ +GI ++  + +FG L  AF+ G PPHGGIA G DRIV LL  A ++R+V  
Sbjct: 463 DVQERVFNVMGIGEQEAQEKFGFLLDAFKFGAPPHGGIAFGWDRIVSLLTRADSIRDVIA 522

Query: 562 FPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           FP S    D L  +P+ ++ EQ +E G+  V
Sbjct: 523 FPKSGGGFDPLTEAPAPITPEQRKETGVDAV 553


>gi|269103021|ref|ZP_06155718.1| aspartyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268162919|gb|EEZ41415.1| aspartyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 592

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 223/590 (37%), Positives = 337/590 (57%), Gaps = 11/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD    FE+A 
Sbjct: 2   RTQYCGQLNKSQAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKEVFELAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R    +N ++ TG++E+ A  +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRNEFCIRLTGEVRTRPESQVNKDMATGEVEVLASGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G+FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGNFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++  +++E  N +     F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSAEQVRAVTEQMITEMWKELLNVDL--GEFPIMPFSEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  V  I   GG   +R   D   ++    G  GLA++   
Sbjct: 297 DIVKDVDFKVFSAPANDEKG-RVAVICVPGGAELSRKQIDEYTKFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN      +  R + Q GD   F A             R  + +
Sbjct: 356 DRAAGLEGVQSPVAKFLNEEVIANLLERTNAQTGDIILFGADSNRVVTESMGALRLKLGE 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +LG+ + + ++  W++DFP +E N E+  +   H+PFT P     E LK N   ++ +  
Sbjct: 416 DLGLTDKSAWKPLWVVDFPMFEEN-EDGSLSAMHHPFTSPLNISPEELKANPAGAL-SNA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+    F  +GI+ +    +FG L  A + G PPH G+A 
Sbjct: 474 YDMVLNGYEVGGGSVRIHNGEMQAAVFDILGIAADEQRLKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +
Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSVANPAALEELAIAV 583


>gi|148825398|ref|YP_001290151.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|166225348|sp|A5UAG7|SYD_HAEIE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148715558|gb|ABQ97768.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 588

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 219/592 (36%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ + + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRVYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++            F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEIVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    +A+  R++ Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+   + ++  W++DFP +E  +EE  +   H+PFT P+         D  S  A  Y
Sbjct: 417 DLGLTRLDEWKPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL +++ ++
Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAIQVTKS 587


>gi|68248924|ref|YP_248036.1| aspartyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81336665|sp|Q4QNM1|SYD_HAEI8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|68057123|gb|AAX87376.1| aspartyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 588

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 222/591 (37%), Positives = 333/591 (56%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++  ++            F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHDLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    +A+  R++ Q GD  FF A             R  +  
Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGC 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+   + ++  W++DFP +E  +EE  +   H+PFT P+         D  S  A  Y
Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DR+ MLL G +N+R+V  FP +     L+  +PS V+ + L EL + +V+
Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFVNPQALEELAISVVK 586


>gi|229846405|ref|ZP_04466513.1| aspartyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229810498|gb|EEP46216.1| aspartyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 588

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 222/592 (37%), Positives = 337/592 (56%), Gaps = 11/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ + + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRVYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++            F  + + +A+ R+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMCRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    +A+  R++ Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +LG+   + ++  W++DFP +E  +EE  +   H+PFT P+   +E L+  D  S  A  
Sbjct: 417 DLGLTRLDEWKPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSLEQLEA-DPTSAVANA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A 
Sbjct: 475 YDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G+DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+
Sbjct: 535 GLDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586


>gi|84388516|ref|ZP_00991063.1| aspartyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84377065|gb|EAP93936.1| aspartyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 590

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/591 (38%), Positives = 329/591 (55%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG+L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD    F IA 
Sbjct: 2   RTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMKDIFPIAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ +   G V  R    +N ++ TG++EL A  +EI++ +E LPL     +   E 
Sbjct: 62  QLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELYATGLEIINRSEALPLDF--NQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R KYR++DLRR  +   I  R R  + +R R + EN F++  TP+LT ++PEGARD+LV
Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVR-RFLDENLFLDIETPVLTKATPEGARDYLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E S
Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+   ++ N  E ++  +++E  +       F  + + +AIRR+G+DKPDLRNP+ + +V
Sbjct: 238 FMSSQEVRNITEKLVHDMWKELLDVEL--GQFPVMPFSEAIRRFGSDKPDLRNPLELVDV 295

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VFS   +   G  V  I   GG    R   D   E     G  GLA++  
Sbjct: 296 ADLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAKLTRKQIDGYAEHVGIYGAKGLAWMKV 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
               +G      PVAK LN      +  R   + GD   F A             R  + 
Sbjct: 355 NDRAAGMEGIQSPVAKFLNEDVINGLLERTQAESGDIILFGADKANIVAEAMGALRIKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
            +L + +   +   W++DFP +E  + E  +   H+PFT P G   E LK N   +  + 
Sbjct: 415 DDLELTDKKAWAPLWVIDFPMFE-EDGEGNLHAMHHPFTSPLGVNAEELKSNP-AAANSD 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHSAEMQTAVFGILGIEAKEQQEKFGFLLEALKYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+ MLL G +N+R+V  FP +     LL  +PS  +   L EL + +
Sbjct: 533 FGLDRLAMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAV 583


>gi|86146480|ref|ZP_01064803.1| aspartyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85835743|gb|EAQ53878.1| aspartyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 592

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/597 (38%), Positives = 331/597 (55%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG+L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD    F IA 
Sbjct: 2   RTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMKDIFPIAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ +   G V  R    +N ++ TG++EL A  +EI++ +E LPL     +   E 
Sbjct: 62  QLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELYATGLEIINRSEALPLDF--NQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R KYR++DLRR  +   I  R R  + +R R + EN F++  TP+LT ++PEGARD+LV
Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVR-RFLDENLFLDIETPVLTKATPEGARDYLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E S
Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+   ++ N  E ++  +++E  +       F  + + +AIRR+G+DKPDLRNP+ + +V
Sbjct: 238 FMTSQEVRNVTEKLVHDMWKELLDVEL--GQFPVMPFSEAIRRFGSDKPDLRNPLELVDV 295

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VFS   +   G  V  I   GG    R   D   E     G  GLA++  
Sbjct: 296 ADLVKDVEFKVFSGPANDEKG-RVAVIRVPGGAKLTRKQIDGYAEHVNIYGAKGLAWMKV 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
               +G      PVAK L+      I  R   + GD   F A             R  + 
Sbjct: 355 NDRAAGMEGIQSPVAKFLSEDVINGILDRTQAESGDIILFGADKAGIVAEAMGALRIKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
            +L + +   +   W++DFP +E  + E  +   H+PFT P G   E LK N   +  + 
Sbjct: 415 DDLELTDKKAWAPLWVVDFPMFE-EDGEGNLHAMHHPFTSPLGVNAEELKANP-AAANSD 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHSAEMQTAVFGILGIEAKEQQEKFGFLLEALKYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+ MLL G +N+R+V  FP +     LL  +PS  +   L EL + +    KK
Sbjct: 533 FGLDRLAMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAVKLAEKK 589


>gi|285019195|ref|YP_003376906.1| aspartyl tRNA synthetase [Xanthomonas albilineans GPE PC73]
 gi|283474413|emb|CBA16914.1| putative aspartyl trna synthetase protein [Xanthomonas albilineans]
          Length = 583

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 221/591 (37%), Positives = 339/591 (57%), Gaps = 18/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI Q++  P++A  F++A 
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQIMVEPENAEVFKVAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+  E VL ++G+V +R A  +N  + +G++E+ A  I +L+ A   PLP        E 
Sbjct: 62  SLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIASAISVLNKAA--PLPFHAHENPGEE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +    R +++ ++R  +    F +  TPILT ++PEGARDFLVP
Sbjct: 118 TRLKYRYLDLRRPEMQRMQRTRIKLVQALRRYLDERGFQDIETPILTKATPEGARDFLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLDME +F
Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V + D+ + +E ++R +F++  +   +   F R+ + +A+RRYG+DKPDLR  + + +V 
Sbjct: 237 VRERDVQDFVEAMVRTIFKDVVDVE-LDAGFPRMTWAEAMRRYGSDKPDLRIDLELVDVA 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWA--IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           E     +F  FS   + +P   V A  IP +G   +R   D     A   G  GLAY+  
Sbjct: 296 EQVKACDFAAFSSAAN-DPDGRVAALRIP-RGASLSRKQIDEYAAHAAKYGAKGLAYV-- 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++ +SG ++   P+ K  +    +A+   +    GD  FF AG   K   F    R    
Sbjct: 352 KIADSGEIS--SPIQKFFDGAAFDALLAHVGAGRGDIVFFGAGAYTKVSDFMGALRLKAG 409

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAF 480
           ++ G+I    +   W+ DFP +EW+EE ++    H+PFT P    + +L+ +   ++   
Sbjct: 410 KDFGLIAVG-WRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIATLRAHAKTAVSR- 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGGIA
Sbjct: 468 GYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GIDRI  L+ G +++R+V  FP +    DL+  +PS ++  QL E+ +++
Sbjct: 528 FGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIADTQLAEVHVQV 578


>gi|330829085|ref|YP_004392037.1| aspartyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328804221|gb|AEB49420.1| Aspartyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 588

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 226/590 (38%), Positives = 337/590 (57%), Gaps = 16/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +  +  G  + L GWVHR R  GG+IF+D+RD  GI QV  +PD    F +A 
Sbjct: 2   RSIYCGQVNEAHAGQTITLCGWVHRRRDLGGLIFIDMRDREGIVQVFFDPDKPDAFALAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R E+ + + G+V +R     N+++ TG IE+ A ++ I++ AE  PLP+   +   E 
Sbjct: 62  ELRGEFCIQVTGVVRTRPESQRNSDMATGAIEVFAHELNIINRAE--PLPLDFNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           I  KYR+LDLRR  + K +  R +    +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ISLKYRYLDLRRPEMAKYLKTRAKASAFVRRFMDEHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++    N +    +F  + +D+A+RRYG+DKPDLR P+ + +V 
Sbjct: 239 MTAPQVREVMEEMIRKLWLHILNVDL--GDFPIMTFDEAMRRYGSDKPDLRLPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D   ++    G  GLA++  +
Sbjct: 297 DLLTAVEFAVFAGPAN-DPKGRVAALKVPGGAELSRKQIDEYTKFVGIYGAKGLAWM--K 353

Query: 363 LDESGN-VAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           ++E+ N + G+  PVAK L+      I  R    DGD  FF A      C      R  +
Sbjct: 354 VNEAANGIEGVQSPVAKFLSDAIVREILARTGAADGDIIFFGADSKKVVCDAMGALRLKV 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
            ++LG++  N ++  W++DFP +E  + E  +   H+PFT P       LK N  +   A
Sbjct: 414 GRDLGLLE-NSWKPLWVIDFPMFE-EDGEGGLAAMHHPFTAPSNMSPAELKANP-VGAYA 470

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H SE+    F  +GI+      +FG L  A + G PPH G+
Sbjct: 471 NAYDMVINGYEVGGGSVRIHNSEMQSTVFDILGITPAEQRLKFGFLLDALKYGTPPHAGL 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR+ MLL G +N+R+V  FP +     L+  +PS  +  QL EL +
Sbjct: 531 AFGLDRLSMLLTGTENIRDVIAFPKTTAAACLMTDAPSLANAAQLGELAI 580


>gi|289641491|ref|ZP_06473654.1| aspartyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289508701|gb|EFD29637.1| aspartyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 579

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 326/592 (55%), Gaps = 25/592 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63
           R+H CG L    +G+ V + GWV R R HG  ++F+D+RDH G  Q V +        + 
Sbjct: 6   RSHLCGALRTEHIGATVTVCGWVARRRQHGQSLMFVDLRDHSGQVQCVVDG-------SV 58

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYP 121
            VRSE+V+ +   V +R   TIN N+ TG+IEL    + +LS A   P P+  ER     
Sbjct: 59  DVRSEYVVAVTATVAARPVGTINPNLATGEIELHDCTVMVLSAALPPPFPI-DERADSVD 117

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R  YR+LDLRR+ + +N+  R+ ++ ++R  ++   F+E  TP+L  S+PEGAR+F+
Sbjct: 118 EATRLTYRYLDLRRERMQRNLRTRSAVLAALRSELVPREFVEVETPLLMPSTPEGAREFV 177

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   GSFYALPQ+PQ +KQLLM  G DRYFQ A C RDED R+DR   EF QLD+EM
Sbjct: 178 VPSRQFPGSFYALPQSPQLFKQLLMVGGTDRYFQFARCLRDEDLRADRQ-YEFTQLDIEM 236

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD+L  +   +       + G  V     RI + +A+ R+G DKPDLR  + +  
Sbjct: 237 SFVDQDDVLEVISAAVLAAARAVTGGTVVPIE--RITWHEAMDRFGVDKPDLRFGLELVE 294

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T  F  S F+ F+   SV  G  V   P      NR   D + E A+  G  GL ++  
Sbjct: 295 LTGVFTGSGFQAFAGAPSVK-GIRV---PGGSATHNRKALDALTERAKQLGAKGLVWM-- 348

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R+   G++    PVAK L+      I      +DGD    +A +    C      RN + 
Sbjct: 349 RVGAGGSLE--SPVAKFLSAAELAGIVKATGGEDGDLLLLVADEWATVCEVLGQLRNDLG 406

Query: 422 QELGIINCNCFEFCWIMDFP-FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           +         F F W+ DFP F   + +  +    H+PFT P          + L++++ 
Sbjct: 407 RPPA--GEGGFRFAWVTDFPLFVGVDSQTGRPKPGHHPFTRPHPDDLDKLETEPLAVRSR 464

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+ SG IR H  ++  + F+ +GIS E  + RFG     F  G PPHGG A
Sbjct: 465 AYDLVLNGWELGSGSIRIHEPDLQQRIFATLGISAEEADRRFGFFLTPFSYGAPPHGGFA 524

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            GIDR+V +L G  N+REV  FP +Q+  D + G+P+ +   Q+RELG+R++
Sbjct: 525 VGIDRLVAILAGEDNIREVIAFPKTQSGLDPMTGAPTPIDARQVRELGIRVL 576


>gi|149917881|ref|ZP_01906376.1| aspartyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149821401|gb|EDM80803.1| aspartyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 612

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 226/596 (37%), Positives = 339/596 (56%), Gaps = 19/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CGDL +SD G  V L GWV+  R HGG IF+D+RD  G+TQVV  PD  +A  E  
Sbjct: 9   RTHTCGDLRLSDEGREVILFGWVNFRRDHGGRIFIDLRDREGLTQVVFGPDVDAAAHEAG 68

Query: 63  KSVRSEWVLCIDGLVMSR--SAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-- 118
            ++RSE  + + G V+SR  +    N N+ TG+IE+   ++E+ S A+  P  V  +   
Sbjct: 69  GALRSEDCIGVAGKVVSRVKNQGQANPNLATGEIEVEVTRLEVFSKAQTPPFDVSKDDRL 128

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E++R +YR+LDLRR +L +N + R+++    R  M  + F+E  TP +   +P GAR
Sbjct: 129 DTNENLRLQYRYLDLRRPSLQRNFILRSKVGTLTRTHMAGQGFLELETPYMVKYTPGGAR 188

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVPSR+N G+FYAL ++PQ +KQL M SGFD+YFQI  CFRDED R+DR P EF Q+D
Sbjct: 189 NFLVPSRLNPGTFYALAESPQIFKQLFMVSGFDKYFQITRCFRDEDLRNDRQP-EFTQID 247

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E+SF   + +   +E ++R ++ E  +   ++ +F R+ + +A+ RYG+DKPD R  + 
Sbjct: 248 VELSFATPERVFEPIEALMRKLWGELLD-TQLAESFPRMTWAEAMDRYGSDKPDTRFGLE 306

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
             ++TE      F VF K   V    +   +P + G G  R   D++  +A+ +   G  
Sbjct: 307 FTDLTEKTRGCGFAVFEKAEYV----KGICLPGEHGKGYGRGKIDKLTAFAKKRESGGAK 362

Query: 358 YIFW-RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            + W R++  G   G    AK +     + I   +   +G    FIA D     +     
Sbjct: 363 GLAWSRVEADGTWKGGS--AKFIAPELQKQISADMGADEGSLLLFIADDFHTTHAVLNSI 420

Query: 417 RNHIAQELGIINCNC--FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           R H+   LG+++     + F W+ DFP +E N E      +H+PFT P+     L  +D 
Sbjct: 421 RLHLRDALGLVDPKAKQWNFLWVTDFPLFEKNGEGNWTS-SHHPFTCPKDEHVELLLSDP 479

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             + A  YDLV NG E+  G IR H S+V  + F  +G+ +E  E +FG L  AF+ G P
Sbjct: 480 GKVLAKAYDLVLNGNEVGGGSIRIHRSDVQAKVFEALGLGEEEREQKFGFLLDAFKYGPP 539

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           PHGGIA G+DR+ ML+ GA+++R+V  FP +Q   DL+   P+     QL EL +R
Sbjct: 540 PHGGIALGLDRLAMLMSGAESLRDVIAFPKTQKGQDLMTHCPTPADDAQLAELFIR 595


>gi|326622932|gb|EGE29277.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 577

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 220/580 (37%), Positives = 329/580 (56%), Gaps = 9/580 (1%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75
           +G  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G
Sbjct: 1   MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V +R A+ +NA++ TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR
Sbjct: 61  TVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEEARLKYRYLDLRR 118

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALP
Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME 
Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+
Sbjct: 238 LVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVADLLKSVEFAVFA 295

Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374
              + +P   V A+   GG   +R   D    + +  G  GLAYI       G      P
Sbjct: 296 GPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNERAKGLDGINSP 354

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
           VAK L     +AI  R   QDGD  FF A +           R  + ++L + + + +  
Sbjct: 355 VAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKDLSLTDEDKWAP 414

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            W++DFP +E ++ E  +   H+PFT P+    S          A  YD+V NG+E+  G
Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGG 473

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+DR+ MLL G  
Sbjct: 474 SVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           N+R+V  FP +     L+  +PS  +   L ELG+++V+ 
Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKK 573


>gi|319939805|ref|ZP_08014161.1| aspartyl-tRNA synthetase 1 [Streptococcus anginosus 1_2_62CV]
 gi|319811018|gb|EFW07333.1| aspartyl-tRNA synthetase 1 [Streptococcus anginosus 1_2_62CV]
          Length = 579

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 220/590 (37%), Positives = 331/590 (56%), Gaps = 25/590 (4%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    DS  F   + +  E
Sbjct: 6   IGNYGLEQVGQKMTATGWVANIRNHGKLAFIELRDREGLLQVFVAGDSPAFTEIEHLHKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R A  +N  I +GQ+EL A+KI+IL+ ++ LP  +       E +R KY
Sbjct: 66  DVISVTGEVVKREARFVNKAIKSGQVELRAEKIQILASSKPLPFELDQHAHTGEELRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR  + +N+  R ++ +++R  +  ++F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRRGKMTENLKLRHQVTSTIRDYLNGKDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+Q+  CFRDED R DR P EF Q+DMEMSF  + D
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQVVRCFRDEDLRGDRQP-EFTQVDMEMSFASEKD 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++G  ++  F  I Y++A+ R+GTDKPD R  + + N+T     
Sbjct: 245 IRMLVEEMLKAVVKK-THGLELTEAFPTISYEEAMNRFGTDKPDTRFGLELKNLTNLCQD 303

Query: 309 SEFRVFSKILSVNPGYEVWAI--PAKGGGGNRA----FCDRMNEWARSQGQPGLAYIFWR 362
           +   +  +  + +   E+W I  P       +     F   M E+  S+        F  
Sbjct: 304 NPSLLLKQAFARHE--ELWGICVPNATDSFTKKQLSHFYQEMKEFGASR--------FTS 353

Query: 363 LD-ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           L  E+G +   G +A         A   R + QDGD    +     +        R  IA
Sbjct: 354 LKVEAGEL--QGDLASTFE-AEAAAFIDRFEAQDGDLLLLVIAKRRQAQEALGHLRLEIA 410

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +IN +  +F W++D+P  EWNEE+ +    H+PFT  QG  E+ +  DL SIK+  
Sbjct: 411 KQLDLINQSRLDFLWVLDWPLLEWNEEQGRYQAMHHPFT--QGIFEN-EQEDLASIKSHA 467

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+EI  G +R H  +     F  +G+ KE  E  FG    A   G PPHGG+A 
Sbjct: 468 YDIVLNGYEIGGGSLRIHDRKSQEAMFELLGMEKEDYERDFGFFLEALDYGFPPHGGLAL 527

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VM+L G +N+R+V  FP +    D ++ SPS V   Q++EL L +
Sbjct: 528 GLDRLVMILAGEENIRQVIAFPKNGTGFDPMLESPSQVDAGQVKELHLEL 577


>gi|153828676|ref|ZP_01981343.1| aspartyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229529746|ref|ZP_04419136.1| aspartyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|148875829|gb|EDL73964.1| aspartyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229333520|gb|EEN99006.1| aspartyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|327483869|gb|AEA78276.1| Aspartyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 591

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 234/591 (39%), Positives = 343/591 (58%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD    F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMVDVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK L     +AI  R   Q GD   F   D  K  + A  A R    
Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +ELGI N + +   W++DFP +E +++E  +   H+PFT P     E LK N   ++ + 
Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEAL-SN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +
Sbjct: 533 FGLDRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAV 583


>gi|332883986|gb|EGK04266.1| aspartyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 584

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 223/594 (37%), Positives = 337/594 (56%), Gaps = 21/594 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD--SACFE 60
           YR H+CG+L ++DV   V L+GWV+ VR   GG+ F+D+RD YGITQ+  + D  +  +E
Sbjct: 2   YRNHTCGELTLADVNKEVTLAGWVNAVRKLGGGVTFIDLRDRYGITQLSFSKDINADLYE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+VL + G V  RS++  N N  TG IE+   ++ IL+ ++  P  +    + 
Sbjct: 62  RANKIGREYVLQVTGNVEERSSK--NPNRSTGDIEIIVNELVILNTSDTPPFTIEDNTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRRD + KN+  R +I    R  +    F+E  TP+L  S+PEGARDF
Sbjct: 120 GDDLRMKYRYLDLRRDVVRKNLELRHKIAFETRRYLDERQFLEVETPVLIGSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNPGEFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MS+V Q+D+LN  E + + +F+     +    +F R+ Y  A++ YG+DKPD R  +   
Sbjct: 239 MSYVNQEDVLNMFEGLTKHLFKVVKGIDI--PDFPRMTYAHAMKYYGSDKPDTRFGMEFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357
            + +     +F VF      +    V AI AKG     R   D + ++ +    G  GL 
Sbjct: 297 EIKDLTEGKDFVVF------DSSEYVGAICAKGAASYTRKQIDALTDYVKRPQIGAKGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y  +  D S   +    V K  N  + +    R   + GD    I G+  K      + R
Sbjct: 351 YARYEADGSLKSS----VDKFYNPEDLKKWAERCQAEPGDLILIICGETEKAQKQLGELR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A++LG+ + N F   W++DFP  E +EE  +    H+PFT P+    +L  +D   +
Sbjct: 407 LEVAEQLGLRDKNQFNCLWVIDFPLLEKDEELGRYFAKHHPFTSPKEEDIALLDSDPGVV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G +R   S++  + F  +G ++E  + +FG L  AF+ G PPH 
Sbjct: 467 RANAYDMVINGVEVGGGSVRIFNSQLQNKMFQILGFTEEKAQAQFGFLMNAFKYGAPPHA 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR+V L  G  ++R+   FP + +  D+++ +P+T+   QL EL L++
Sbjct: 527 GLAFGLDRLVSLFAGLDSIRDCIAFPKNNSGRDMMIDAPATLDPAQLEELNLKV 580


>gi|330997882|ref|ZP_08321716.1| aspartate--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329569486|gb|EGG51256.1| aspartate--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 586

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/600 (38%), Positives = 345/600 (57%), Gaps = 31/600 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFE 60
           +RT++CG+L ++D G  V L+GWV RVR  GG+ F+D+RD YGITQ+V N    D+ C  
Sbjct: 2   FRTNTCGELRLADAGKTVTLAGWVQRVRKMGGMTFVDLRDRYGITQLVFNEEVNDALCAR 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K  R + V+ I G V  R  E+ N N+ TG+IE+   ++ +L+ +   P  +    + 
Sbjct: 62  ANKLGRED-VIQIKGEVNER--ESKNKNLPTGEIEIIVSELTVLNASVTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  + KN+  R ++   +R  + ++ F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRACVRKNLELRHQMTMEVRRYLDSKGFLEIETPMLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +G DRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D++   E + + +F     G  ++  F R+ + +A+R YG+DKPD R  +   
Sbjct: 238 MSFVEQEDVIALFEGMAKHLFRTI-RGIELTEPFPRMPWSEAMRLYGSDKPDTRFGMEFV 296

Query: 301 NVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWA-RSQ-GQPGL 356
            + +    + EF VF      N    +  I   G     R   D++ ++  RSQ G  GL
Sbjct: 297 ELMDVLKGTGEFSVF------NDASYIGGICVPGCASYTRKQLDQLTDFVKRSQIGAKGL 350

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ----DGDSCFFIAG-DPLKFCS 411
            Y   R+ E G+V         ++   T+ + +RL        GD    ++G D +K   
Sbjct: 351 VYA--RVQEDGSVKS------SVDKFYTQEVLLRLKETMKAVPGDLILIMSGEDAMKTRK 402

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
              + R  +   LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L  
Sbjct: 403 QLCELRLEMGTRLGLRDKNKFSLLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLD 462

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ++  +++A  YD+VCNG E+  G IR H  E+  + F  +G ++E  + +FG L  AF+ 
Sbjct: 463 SNPAAVRADAYDMVCNGVEVGGGSIRIHDPELQDKMFKILGFTEERAQEQFGFLMNAFKY 522

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G+DR V L  G  ++R+   FP + +  D+++ +PS +  +QL EL L +
Sbjct: 523 GAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSYIDQKQLDELSLAL 582


>gi|15838454|ref|NP_299142.1| aspartyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|24212425|sp|Q9PCC5|SYD_XYLFA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|9106945|gb|AAF84662.1|AE004007_1 aspartyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 589

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 226/600 (37%), Positives = 340/600 (56%), Gaps = 23/600 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV  +       +S  
Sbjct: 2   RTHFCGLIDETLIGHTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVDSRAIDQNNSEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A  +  E VL ++G+V +R A  +N  I TG++E+ A KI+IL+ A   PLP     
Sbjct: 62  FKVASGLSYEDVLQVEGVVCARHA--VNDKIKTGKVEVIATKIKILNKAA--PLPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E IR KYR+LDLRR  + +    R +++ ++R  +    F +  TPILT ++PEGAR
Sbjct: 118 NPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADR-QLEFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E ++R VF+E + G  +   F R+ + +A+RR+G+DKPDLR  + 
Sbjct: 237 MEFAFVSERDVQDFVEEMIRRVFKEVA-GIELDTTFPRMTWTEAMRRFGSDKPDLRINLE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + +V      S F  F+  ++ +P   V A+    G   +R   D    +    G  GLA
Sbjct: 296 LIDVAALVADSTFTPFTDAVA-HPNGRVAALRIPSGAVLSRKQIDEYAAYTAKYGATGLA 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y   +L   G +    P+AK  +     A+   +  + GD  FF AG+  K   F    R
Sbjct: 355 YA--KLAPIGEIT--SPIAKFFSEDAFAALLSHIGAEKGDIVFFGAGNYNKVSDFMGALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG--GMESLKGNDLL 475
               ++  +I  + +   W+ DFP +EW+EE ++    H+PFT P     ++ L+ +   
Sbjct: 411 LKAGKDFALITAD-WRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAIDDIDELRAHART 469

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           ++    YD+V NG EI  G IR H  E+    F  +GI+++    +FG L  A   G PP
Sbjct: 470 ALSR-GYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARAKFGFLLDALNYGAPP 528

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDRI  L+ G +++R+V  FP +     L+  +PS++S EQL E+ + I + P
Sbjct: 529 HGGIAFGIDRIAALIAGTESIRDVIPFPKTTGAQCLMTDAPSSISEEQLSEIHV-ITKKP 587


>gi|219871764|ref|YP_002476139.1| aspartyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254781735|sp|B8F789|SYD_HAEPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219691968|gb|ACL33191.1| aspartyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 590

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 225/590 (38%), Positives = 342/590 (57%), Gaps = 13/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  + VG  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+ A 
Sbjct: 3   RSHYCGVLNRTHVGEQVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEALFKQAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E  + I G V++R    IN  + TG+IE+  +++ + + +E LPL     +   E 
Sbjct: 63  ALRAEACVQIKGEVIARDTSQINKEMATGEIEVLVKELVVYNNSEVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAERLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E +F
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDVETTF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++RG++      N     F ++ + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 240 MTAPEVRAMMEKMIRGLW--LDRLNVDLGEFPQMTFAEAMRRYGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V  I    G    R   D   ++  + G  GLA+    
Sbjct: 298 DILKDVEFKVFSGPAN-DPEGRVAVIRVPNGAEITRKQIDEYTQFVGNYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK L     +A+  R++ Q+GD  FF   D  K  + A  A R  + 
Sbjct: 357 DVNAGLEGLQSPIAKFLTDDVVKALLARVNAQNGDIIFF-GADSEKVVTDAMGALRLKVG 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++LG+ +   ++  W++DFP +E  ++E      H+PFT P+    E L  N   ++ A 
Sbjct: 416 RDLGLTDLTAWKPLWVVDFPMFE-KDDEGNWSAMHHPFTAPKDLSPEELVQNPKGAV-AN 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R    ++    F  +GI++E  + +FG L  A + G PPH G+A
Sbjct: 474 AYDMVINGYEVGGGSVRIFDPKMQQTVFGILGINEEEQKEKFGFLLDALKFGTPPHAGLA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G+DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L EL ++
Sbjct: 534 FGLDRLTMLITGTENIRDVIAFPKTTAAACLMTDAPSFGNPKALAELAIQ 583


>gi|332993892|gb|AEF03947.1| aspartyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 586

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 218/594 (36%), Positives = 341/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG++  S +G  + L GWV++ R  GG+IF+D+RD  GI QVV +PD      +A 
Sbjct: 2   RTDYCGNIDSSYIGQEITLCGWVNKRRDLGGVIFIDLRDREGIVQVVFDPDLPEVLSVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R E+ + + G V +R    IN ++ TG+IE+    +EI++ ++ LPL     +E  E 
Sbjct: 62  KLRGEFCVKLTGKVRARPEGQINKDMRTGEIEILGTGLEIINRSDALPLDW--NQENSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  + + +  R ++  ++R  +  E F++  TPILT ++PEGARD+LVP
Sbjct: 120 QRLRYRYLDLRRPVMSQRLQFRAKVTGAVRRFLEGEGFLDIETPILTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D+E +F
Sbjct: 180 SRTHKGEFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETTF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++ D ++   E+++R +F    N +    +F R+ Y +A++R+G+DKPDLRNP+ + ++ 
Sbjct: 239 LDADGVMAITESMIRDLFSTMLNVDL--GDFPRMTYAEAMKRFGSDKPDLRNPLELTDIA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V AI   GG   +R   D   ++    G  GLA++   
Sbjct: 297 DLLETVEFKVFSGPAN-DPKGRVAAIRVPGGASMSRKQIDEYTKFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K L+   T+ I  R   Q GD   F A             R  + +
Sbjct: 356 EMAPGQEGLQSPILKFLSEDITDGILQRTGAQAGDILLFGADTNTVVTEAMGALRLKLGE 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +  ++    ++  W++DFP +E  E + ++   H+PFT  +G   E LK N + ++    
Sbjct: 416 DFELLEGE-WKPLWVVDFPMFE--EFDGQLHAIHHPFTALRGLTAEELKANPVGALSD-A 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G +R H  E+    F  +GI +E  +N+FG L  A + G PPH G+A 
Sbjct: 472 YDMVLNGCELGGGSVRIHNEEMQSAVFEILGIEEEEAKNKFGFLLDALRFGAPPHAGLAF 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR+VML+ GA ++R+V  FP +      L  +PS  + +QL EL +  V+ P
Sbjct: 532 GLDRLVMLMTGASSIRDVMAFPKTTTAACPLTSAPSPANPQQLEELAIATVKKP 585


>gi|309972523|gb|ADO95724.1| Aspartyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 588

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 220/591 (37%), Positives = 333/591 (56%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ + + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRVYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++            F  + + +A+ R+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMCRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    +A+  R++ Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+   + ++  W++DFP +E  +EE  +   H+PFT P+         D  S  A  Y
Sbjct: 417 DLGLTRLDEWKPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+
Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586


>gi|71901605|ref|ZP_00683685.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella
           fastidiosa Ann-1]
 gi|71728615|gb|EAO30766.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella
           fastidiosa Ann-1]
          Length = 589

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 224/600 (37%), Positives = 341/600 (56%), Gaps = 23/600 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI Q+  +       +S  
Sbjct: 2   RTHFCGLINETLIGHTVTLAGWTDVARNLGGVCFIDLRDHEGIVQITVDSRAIDQNNSEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A  +  E VL ++G+V +R A  +N  I TG++E+ A KI+IL+ A   PLP     
Sbjct: 62  FKVASGLSYEDVLQVEGVVRARHA--VNDKIKTGKVEVIATKIKILNKAA--PLPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E IR KYR+LDLRR  + +    R +++ ++R  +    F +  TPILT ++PEGAR
Sbjct: 118 NPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADR-QLEFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E ++R VF+E + G  +   F R+ +++A+RR+G+DKPD+R  + 
Sbjct: 237 MEFAFVSERDVQDFVEEMIRRVFKEVA-GIELDTTFPRMTWEEAMRRFGSDKPDMRINLE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + +V      S F  F+  ++ +P   V A+    G   +R   D    +    G  GLA
Sbjct: 296 LIDVAALVADSTFTPFTNAVA-HPNGRVAALRIPSGAVLSRKQIDEYAAYTAKYGATGLA 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y   +L  +G +    P+AK  +     A+   +  + GD  FF AG+  K   F    R
Sbjct: 355 YA--KLAPTGEIT--SPIAKFFSEDAFAALLSHIGAEKGDIVFFGAGNYNKVSDFMGALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG--GMESLKGNDLL 475
               ++  +I  + +   W+ DFP +EW+EE ++    H+PFT P     ++ L+ +   
Sbjct: 411 LKAGKDFALITAD-WRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAINDIDELRAHART 469

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           ++    YD+V NG EI  G IR H  E+    F  +GI+++    +FG L  A   G PP
Sbjct: 470 ALSR-GYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARAKFGFLLDALNYGAPP 528

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDRI  L+ G +++R+V  FP +     L+  +PS +S EQL E+ + I + P
Sbjct: 529 HGGIAFGIDRIAALIAGTESIRDVIPFPKTTGAQCLMTDAPSPISEEQLSEIHV-ITKKP 587


>gi|325579051|ref|ZP_08149007.1| aspartate--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159286|gb|EGC71420.1| aspartate--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 590

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 220/596 (36%), Positives = 342/596 (57%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  + +G  V LSGWVHR R  GG+IF+D+RD  G+ QV  +P        A 
Sbjct: 3   RTHYCGALNRNYIGQEVTLSGWVHRRRDLGGLIFIDMRDRDGVVQVCFDPKYQEALTAAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPDNQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G+++     +     F ++ + +A+ R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAPEVREIMERMVHGLWQNIIGVDL--GKFPQMTWQEAMTRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGTEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    +A+  R+  Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVKAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +LG+   + ++  W++DFP +E  +EE  +   H+PFT P+    E L+ N   ++ A  
Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFTPEQLEANPTDAV-ANA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R    ++    F  +GI+++    +FG L  A + G PPH G+A 
Sbjct: 475 YDMVINGYEVGGGSVRIFDPKMQQTVFRILGINEQEQHEKFGFLLDALKFGTPPHAGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V++ K+
Sbjct: 535 GLDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELSISVVKSEKE 590


>gi|313816211|gb|EFS53925.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|314955558|gb|EFS99959.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|315105747|gb|EFT77723.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|315108667|gb|EFT80643.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
          Length = 588

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 222/577 (38%), Positives = 324/577 (56%), Gaps = 23/577 (3%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  +R+E+ + + G+V +R  
Sbjct: 3   LAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHDLRNEYCIRVTGVVEARPE 62

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
              N N+ TG+IE++  ++E+L+ +  LP  +       E  R KYR+LDLRR   H+ +
Sbjct: 63  GNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDARLKYRYLDLRRPHQHEAL 122

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202
           V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+R+  G +YALPQ+PQ +K
Sbjct: 123 VLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPARLAPGCWYALPQSPQLFK 182

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           QLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV+QDD++   E  +   ++
Sbjct: 183 QLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFVDQDDVIALAEETMAACWK 241

Query: 263 EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNP 322
               G  +     RI + +A+ RYG+DKPDLR    +  VT+ F ++ FRVF       P
Sbjct: 242 II--GVDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTDFFANTAFRVFQA-----P 294

Query: 323 GYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
                 +P       R F D   EWAR++G  GLAYI   + + G     GPVAK+++  
Sbjct: 295 YVGAVVMPGGASLPRRQF-DAWQEWARTRGAKGLAYI--TISDEG--VPEGPVAKNISEE 349

Query: 383 NTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPF 442
               I  ++  + GD+ FF AG           AR  I +   + + + + FCW++D P 
Sbjct: 350 EKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRCELFDPSDWAFCWVVDAPL 409

Query: 443 YEWNEE-EKKIDFA---------HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           ++  +E E   D A         H+ FT P          D  S  A+ YD V NG E+ 
Sbjct: 410 FKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDPGSALAYAYDFVVNGNEVG 469

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G IR H  +V  + F+ +GI  E  + +FG L  AF+ G PPHGGIA G+DR+VMLL G
Sbjct: 470 GGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGG 529

Query: 553 AKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            + +R+V  FP + N  D L  +P+ ++  Q RE G+
Sbjct: 530 FETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAGV 566


>gi|323341710|ref|ZP_08081943.1| aspartate--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464135|gb|EFY09328.1| aspartate--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 583

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 218/595 (36%), Positives = 331/595 (55%), Gaps = 20/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L +  VG  V L GWV + R  G I F+D+RD  G+ Q+V N D   + I + 
Sbjct: 3   RTHHNGMLRIEHVGEHVELVGWVAKRRNFGSINFIDLRDRSGLVQLVVNHDE--YPIVQE 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +++E+V+ + G V  R  +  N  + TG IE+   +++I++ A + P+ +  E +  E  
Sbjct: 61  LKNEFVISVSGTVRERQDK--NPKMDTGDIEIEVTEVKIINKAAQTPMIIADETDALEET 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  +   ++ R RI+  MR  +    FI+  TP+LT S+PEGAR++LVPS
Sbjct: 119 RLKYRYLDLRRPVMQNKLITRARIVTEMRRTLDEMGFIDVETPMLTKSTPEGAREYLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G FYAL Q+PQ +KQLLM  G +RY+Q+A CFRDED R+DR   +F Q+D+E SF+
Sbjct: 179 RVHEGEFYALAQSPQIFKQLLMIGGLERYYQVARCFRDEDLRADR-QLDFTQVDIEASFL 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC---YDDAIRRYGTDKPDLRNPIIMHN 301
           +Q   ++ +E V+  V       N +S    RI    ++DA+  YG+DKPD+R  + + +
Sbjct: 238 DQQQFMSLVEEVVDNVM-----VNVLSLEKPRIPQIRFEDALNVYGSDKPDMRFEMYLQD 292

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
               F+ SEF+VFS  L      +   +  +     R   D+  +  +  G  GL  +  
Sbjct: 293 FNRIFMLSEFKVFSDTLKEGGVLKGLVLKGQAESMTRKVMDKYTDLVKKNGLKGL--VVL 350

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +++E G   G    AK ++      +    +++ GD  F  +G     C+     R  +A
Sbjct: 351 KVEEDGFAGG---AAKFIDEQERLQMIQEYELEVGDVVFIGSGMWENTCTAVGALRLQLA 407

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++  +I  N F +CW++DFP +E +E+   I   H+PFT P+   E+L   D L + A  
Sbjct: 408 KDYNLIPENTFAYCWVVDFPMFEMDED--VIIARHHPFTAPREEDEALLNTDPLKVIAQA 465

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NGFEIA G +R +  E+  Q F  +G + E ++ RFG    AF+ G PPHGGIA 
Sbjct: 466 YDLVLNGFEIAGGSMRIYRQELQQQMFEIIGFTPEQIKKRFGFFVDAFKYGTPPHGGIAF 525

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR  M L  +  +R+V  FP + +    L  +PS    +QL EL L IV   K
Sbjct: 526 GLDRFAMALTHSDTIRDVIAFPKNASARCPLTNAPSPAVDKQLEELHLEIVHKKK 580


>gi|291515552|emb|CBK64762.1| aspartyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 584

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 222/592 (37%), Positives = 330/592 (55%), Gaps = 18/592 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61
           YRTH+CG L   +V   V L+GWV +VR  G + F+D+RD YGITQ+V    S     E 
Sbjct: 2   YRTHTCGCLRACNVNQTVTLAGWVQKVRNLGAMTFIDLRDRYGITQIVVEEHSPAEARET 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
              V  EWV+ + G V+ R ++  N  + TG IE++A+K+ IL  AE  P  +    +  
Sbjct: 62  VCRVGREWVIQVVGKVVERQSK--NPKMPTGDIEVTAEKVAILHEAEVPPFTIEEVSDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  L +N++ R ++   +R  +  E F+E  TP L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRPPLQRNMILRHKMAQEIRRFLSDEGFLEIETPCLVGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++   FYALPQ+PQ  KQLLM +G+D+YFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMSPNQFYALPQSPQTLKQLLMVAGYDKYFQIVRCFRDEDLRADRQP-EFTQIDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D+L   E   + +F     G  ++    R+ + +A+ +YG+DKPDLR  +    
Sbjct: 239 SFVEQEDVLEIFERWAKHMFRHVM-GIELTEPLRRMPWIEAMEKYGSDKPDLRFGMEFAE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQPGLAYI 359
           +T+      F VF +   +  G+      A      R   D + E+ + Q  G  GL +I
Sbjct: 298 ITDLAKGHGFSVFDEAEYIT-GFAATGCAAY----TRKQIDSLTEFVKRQQIGAKGLVWI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R+ E G  +    + K  +     A+  R     GD  F + G   K  +     R  
Sbjct: 353 --RVAEDGVKSS---IDKFYSPEEVRAMAERCGAVAGDMVFILCGKKFKTLTQLCALRLE 407

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +AQ+LG+ +   F   W++DFP +EW++E ++    H+PFT P+        +D   ++A
Sbjct: 408 VAQQLGLRDPQKFAPLWVVDFPLFEWDDETQRYYAVHHPFTSPKLEDVQYLDSDPGRVRA 467

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD VCNG EI  G IR H S++  + F  +G + E  + RFG L  AF+ G PPHGG+
Sbjct: 468 NAYDFVCNGTEIGGGSIRIHDSKLQEKMFELLGFTPEEAQKRFGFLMNAFKYGAPPHGGL 527

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G DR+  L  G++++R+   FP +    D+++ +P  +   QL EL L++
Sbjct: 528 AFGFDRLCSLFGGSESIRDYIAFPKNNAGRDVMLDAPGYIDQTQLDELYLQL 579


>gi|254556837|ref|YP_003063254.1| aspartyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300768150|ref|ZP_07078055.1| aspartate--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|254045764|gb|ACT62557.1| aspartyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300494214|gb|EFK29377.1| aspartate--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 598

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 220/597 (36%), Positives = 339/597 (56%), Gaps = 15/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT   G +    +G  V L GWV + R  G +IF+D+RD  GI Q+V + +  +    +A
Sbjct: 3   RTTYAGLINEDYLGQTVTLQGWVQKRRDLGSLIFIDLRDREGIVQLVFSQEFSADALAVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R E+V+ + G V++R+A+ +N  + TG++E+     +IL+ A+  P  +  +    +
Sbjct: 63  DQLRGEYVIEVQGTVVNRNADAVNDRMKTGKVEVEIHDAKILNKAKTPPFYIQDDINVSD 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + + +  R  I  ++     A  F +  TP LT S+PEGARD+LV
Sbjct: 123 ELRLKYRYLDLRRPEMQRGLKIRNGITQAVHSYFDANGFYDIETPFLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV QG FYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R DR P EF Q+DME S
Sbjct: 183 PSRVYQGHFYALPQSPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQP-EFTQIDMETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I +  E +++ V ++   G  +   F R+ + +A+ R+G++KPD+R  + + ++
Sbjct: 242 FLTAEEIQSYTEGLIKQVMKDV-KGVDIKTPFTRMTWQEAMDRFGSEKPDVRFGMELKDM 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
                ++ F+VF   L+     +  A+P      +R   D   E+ +  G  GLA++  +
Sbjct: 301 GAAVSNAGFKVFDNALANGGLVKAIAVPGGADQYSRKQIDAYTEYVKRFGAKGLAWM--K 358

Query: 363 LDESGNVAGMGPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNHI 420
           + + G     GPVAK   N  + EAI      + GD   F A D  K  S      R  I
Sbjct: 359 VTDDGF---SGPVAKFFKNDGDFEAITSAAAAKPGDLLLF-AADSFKVVSDTLGYLRTAI 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLK-GNDLLSIK 478
           A+EL +I+ + + + W++D+P +E++E  ++   AH+PFTMP +  +  L  G D     
Sbjct: 415 AKELDLIDQDQYAYLWVVDWPLFEYDEGIERWVPAHHPFTMPNEEDVHYLNDGEDPHKAH 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD++ NG+E+  G IR H  E+  + F  +  +KE  + +FG L  A   G PPHGG
Sbjct: 475 AQSYDIILNGYELGGGSIRIHTRELQEKMFKALDFTKERAQEQFGFLLDALDMGFPPHGG 534

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           +A G+DR  MLL G  N+REV  FP +    + +  +PS VS +QL +L L I  NP
Sbjct: 535 LAIGLDRFAMLLSGNDNIREVIAFPKNSKASEPMTNAPSRVSDQQLADLDLNIT-NP 590


>gi|28198847|ref|NP_779161.1| aspartyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182681544|ref|YP_001829704.1| aspartyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130090|sp|Q87CW0|SYD_XYLFT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238691039|sp|B2I4Y5|SYD_XYLF2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|28056938|gb|AAO28810.1| aspartyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182631654|gb|ACB92430.1| aspartyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307579971|gb|ADN63940.1| aspartyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 589

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 224/593 (37%), Positives = 337/593 (56%), Gaps = 24/593 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI Q+  +       +S  
Sbjct: 2   RTHFCGLINETLIGHTVTLAGWTDVARNLGGVCFIDLRDHEGIVQITVDSRAIDQNNSEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F +A  +  E VL ++G+V +R A  +N  I TG++E+ A KI+IL+ A   PLP     
Sbjct: 62  FRVASGLSYEDVLQVEGVVHARHA--VNDKIKTGKVEVIATKIKILNKAA--PLPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E IR KYR+LDLRR  + +    R +++ ++R  +    F +  TPILT ++PEGAR
Sbjct: 118 NPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADR-QLEFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E ++R VF+E + G  +   F R+ + +A+RR+G+DKPD+R  + 
Sbjct: 237 MEFAFVSERDVQDFVEEMIRRVFKEVA-GIELDTTFPRMTWKEAMRRFGSDKPDMRINLE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWA--IPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           + +V      S F  F+  ++ +P   V A  IP +G   +R   D    +    G  GL
Sbjct: 296 LIDVAALVADSTFTPFTNAVA-HPNGRVAALRIP-RGAVLSRKQIDEYAAYTAKYGATGL 353

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY   +L  +G +    P+AK  +     A+   +  + GD  FF AG+  K   F    
Sbjct: 354 AYA--KLAPTGEIT--SPIAKFFSEDAFAALLSHIGAEKGDIVFFGAGNYNKVSDFMGAL 409

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG--GMESLKGNDL 474
           R    ++  +I  + +   W+ DFP +EW+EE ++    H+PFT P     ++ L+ +  
Sbjct: 410 RLKAGKDFALITAD-WRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAINDIDELRTHAR 468

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            ++    YD+V NG EI  G IR H  E+    F  +GI+++    +FG L  A   G P
Sbjct: 469 TALSR-GYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARAKFGFLLDALNYGAP 527

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           PHGGIA GIDRI  L+ G +++R+V  FP +     L+  +PS +S EQL E+
Sbjct: 528 PHGGIAFGIDRIAALIAGTESIRDVIPFPKTTGAQCLMTDAPSPISEEQLSEI 580


>gi|221134423|ref|ZP_03560728.1| aspartyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 590

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 221/597 (37%), Positives = 333/597 (55%), Gaps = 31/597 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG++  S +   V ++GWV++ R  GG+IFLDIRD  GI QVV +PD    F  A 
Sbjct: 2   RTDYCGNIDASFIDQTVTINGWVNKRRDLGGVIFLDIRDREGIVQVVFDPDVEDVFATAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+ + I G V +R    +NA++ TG IE+  + +EI + +  LPL     +E  E 
Sbjct: 62  SVRNEFCVSITGRVRARPDSQVNADMRTGAIEILGKGLEIFNKSAALPLD--WNQENSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +V R+++  ++R  +  ++F++  TPILT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPVMTERLVFRSKVTAAVRRFLEDQDFLDIETPILTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG D+Y+QI  CFRDED R+DR P EF Q+D+E +F
Sbjct: 180 SRTHKGQFFALPQSPQLFKQLLMMSGMDKYYQIVKCFRDEDLRADRQP-EFTQIDIETTF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++ D ++   E ++R +F+   N +    +F ++ Y DA+R YG+DKPDLRNP+ + +V 
Sbjct: 239 LDADGVMAITEKMIRELFQTMLNVDL--GDFPQMTYADAMRLYGSDKPDLRNPLQIIDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V  +   GG   +R   D    +    G  GLA++   
Sbjct: 297 QIMSSVEFKVFSGPAN-DPKGRVAMLCVPGGASLSRKQLDEYANFVGIYGAKGLAWMKIN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+AK L     E +       DGD              F +D  + + +
Sbjct: 356 DIAKGAEGVQSPIAKFLTPEVIEQLLAASGANDGDILL-----------FGSDTYHVVTE 404

Query: 423 ELGIINC---NCFEF-------CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
            LG +     N FE         W++DFP +E  E + +    H+PFT P+         
Sbjct: 405 ALGALRLKVGNDFELNEGDWRPLWVVDFPMFE--EFDGQYHALHHPFTAPRDMTPEQLAA 462

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D  +  +  YD+V NG E+  G +R H  ++    F  +GISKE  +++FG L  A Q G
Sbjct: 463 DPANALSNAYDMVLNGVELGGGSVRIHQQDMQATVFDILGISKEEAQSKFGFLLEALQYG 522

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            PPH G+A G+DR+VML+  A ++R+V  FP +      L  +P   + EQL EL +
Sbjct: 523 TPPHAGLAFGLDRLVMLMTNATSIRDVMAFPKTTTAACPLTSAPGVANAEQLTELAI 579


>gi|152979462|ref|YP_001345091.1| aspartyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704347|sp|A6VQA9|SYD_ACTSZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150841185|gb|ABR75156.1| aspartyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 589

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 218/591 (36%), Positives = 334/591 (56%), Gaps = 11/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L   ++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RSHYCGALNRGNIGQEVTLSGWVHRRRDLGGLIFIDMRDREGIVQVCFDPKYQEALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN N+ TG++E+ A+ + + + ++ LPL     +   E 
Sbjct: 63  DLRNEFCIQIKGEVTARPGNQINKNMATGEVEVLAKALSVYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   MEN++RG++      +     F  + +++A+ R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAPEVRAIMENMIRGLWLNILGADL--GKFPIMTWNEAMTRFGSDKPDLRNPLEIADVA 297

Query: 304 EHFVHSEFRVFSKILS-VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF+   +  N    V  +P  G    R   D   ++    G  GLA++   
Sbjct: 298 DIVKDVDFKVFADPANDANGRVSVIRVP-NGASITRKQIDEYTQFVGIYGAKGLAWLKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK L+    +AI  R   Q GD  FF   D  +  + A  A R  + 
Sbjct: 357 DVNAGLEGVQSPIAKFLSEEKIKAIFDRTSAQTGDILFF-GADKWQIATDAMGALRLKLG 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++LG+   + ++  W++DFP +E + EE  +   H+PFT P+         D  +  A  
Sbjct: 416 RDLGLTRLDEWQPLWVIDFPMFECD-EEGNLAAMHHPFTSPKDFSPEQLEADPTAAVANA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R    ++    F  +GI ++    +FG L  A + G PPH G+A 
Sbjct: 475 YDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEQQQREKFGFLLDALKFGTPPHAGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+ MLL G  N+R+V  FP +     L+  +PS  + + L EL + +V
Sbjct: 535 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQQALEELAITVV 585


>gi|170017025|ref|YP_001727944.1| aspartyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|238688960|sp|B1MY98|SYD_LEUCK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169803882|gb|ACA82500.1| Aspartyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 589

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 226/591 (38%), Positives = 333/591 (56%), Gaps = 16/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT   G +    +   V LSGWV + R  G +IF+D+RD  GI Q+  N   A    +A+
Sbjct: 3   RTTYAGLVDEKYLNQTVTLSGWVQKRRDFGDLIFVDLRDREGIVQLTFNATHAEALAVAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+V+ + G V+ R A  IN  I +GQIE+   + EIL+ ++  P  +       E 
Sbjct: 63  NMRNEYVISVTGQVVRREASQINNKIHSGQIEIDVIEAEILATSKTPPFYIEDNVNANEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           ++ +YR+LDLRR  + KN+  R++I++S    M   +FI   TPIL  S+PEGARD+LVP
Sbjct: 123 LKLQYRYLDLRRPEMQKNLRIRSKIMSSAMHFMDQNDFINIETPILAKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+  GSFYALPQ+PQ +KQLLM SGFDRYFQIA  FRDED R DR P EF Q+D+E SF
Sbjct: 183 SRIFPGSFYALPQSPQLFKQLLMGSGFDRYFQIARAFRDEDLRGDRQP-EFTQMDVETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D+I   +   ++ +  +  N +  +     + + +++ R+GTDKPDLR    + +V+
Sbjct: 242 MSADEIRELVNAWVKAMMSDVVNFDLDTTKIPTLTWQESMDRFGTDKPDLRIAYELKDVS 301

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIFW 361
           E    SEF VF+K  +V  G  V AI   GG  N  R   D+M ++    G  GLA++  
Sbjct: 302 ETVKSSEFGVFAK--AVEAGGVVKAIAVPGGAENYSRKDIDKMAQYIERFGAKGLAWL-- 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++ + G     GP+AK     N  A+      + GD   F AG      +     R   A
Sbjct: 358 KVTDEGIS---GPIAKFFP--NHAALLQVTGAKPGDLLLFGAGRNDIVAATLDYLRRQTA 412

Query: 422 QELGIIN-CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL-KGNDLLSIK 478
           ++L +I+  N + F WI+D+P +E++E+  +   AH+PFTMP +  +  L  G D     
Sbjct: 413 KDLNLIDMTNPWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPNEEDLHYLDDGEDPHQAH 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+ SG IR H  ++  +    +G + E     FG L      G PP GG
Sbjct: 473 AQSYDLVLNGYELGSGSIRIHRMDIQEKMLKALGFTPEAAHEAFGFLLEGMTFGFPPMGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           IA G+DR+ MLL G +N+REV  FP +    + +  +P+ V  +Q+ +LGL
Sbjct: 533 IALGLDRLAMLLAGQENIREVIAFPKNSRATEPMTQAPTRVDHKQVNDLGL 583


>gi|119471739|ref|ZP_01614099.1| aspartate tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119445362|gb|EAW26650.1| aspartate tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 592

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 221/595 (37%), Positives = 339/595 (56%), Gaps = 13/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CG L  + V   V L GW+++ R  GG+IF+D+RD  G+ QVV +P+     + A 
Sbjct: 2   RSIYCGQLNKTHVDQEVELCGWINKRRDLGGLIFVDLRDREGLVQVVFDPEVEGLMDTAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R E+ + + G+V +R    +N ++ TG++E+   ++ I++ +E  PLP+   +   E 
Sbjct: 62  KLRQEFCVQLKGVVRARPESQVNKDMATGEVEILGTELTIINRSE--PLPLDFNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R KYR+LDLRR  +   I  R +  + +R R + EN F++  TP+LT ++PEGARD+LV
Sbjct: 120 RRLKYRYLDLRRLEMSDRIKLRAKASSFVR-RFLDENGFLDIETPVLTKATPEGARDYLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E S
Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDLETS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  D +    E ++R +++   N +    +F  + Y +A+  YG+DKPDLRNP+ + +V
Sbjct: 238 FMSSDQVRGMTEKMIREMWQSLLNVDL--GDFPIMPYSEAMSLYGSDKPDLRNPMKLVDV 295

Query: 303 TEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VFS   +   G   V  +P  G   +R   D   ++    G  GLA++  
Sbjct: 296 ADLVKDVEFKVFSGPANDEKGRVAVLTVPG-GAKLSRKQLDDYTKFIGIYGAKGLAWMKV 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              ++G      P+AK LN      +  R + Q GD   F A             R  I 
Sbjct: 355 NDRDAGVEGVQSPIAKFLNEDVITQLLERTNAQTGDIILFGADKRNTVNEAMGALRLKIG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
            +L I N N +   W++DFP +E  ++E  +   H+PFT P+      L+ N   +I + 
Sbjct: 415 VDLEITNLNSWAPLWVVDFPMFE-EDDEGTLHAVHHPFTAPKDISASELEANPAAAI-SD 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +++   AF  +GI  +  +++FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNADMQEAAFRILGIDAQEQQDKFGFLLDALKYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+DR+VMLL G  N+R+V  FP +     LL  +PS  + + L EL + +VE P
Sbjct: 533 FGLDRLVMLLCGTDNIRDVIAFPKTTQASCLLTDAPSKANNDSLTELAISVVEKP 587


>gi|170730261|ref|YP_001775694.1| aspartyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|238687919|sp|B0U2I5|SYD_XYLFM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167965054|gb|ACA12064.1| aspartyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 589

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 222/592 (37%), Positives = 338/592 (57%), Gaps = 22/592 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI Q+  +       +S  
Sbjct: 2   RTHFCGLINETLIGHTVTLAGWTDVARNLGGVCFIDLRDHEGIVQITVDSRAIDQNNSEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A  +  E VL ++G+V +R A  +N  I TG++E+ A KI+IL+ A   PLP     
Sbjct: 62  FKVASGLSYEDVLQVEGVVCARHA--VNDKIKTGKVEVIATKIKILNKAA--PLPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E IR KYR+LDLRR  + +    R +++ ++R  +    F +  TPILT ++PEGAR
Sbjct: 118 NPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADR-QLEFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E ++R VF+E + G  +   F R+ + +A+RR+G+DKPDLR  + 
Sbjct: 237 MEFAFVSERDVQDFVEEMIRRVFKEVA-GIELDTTFPRMTWKEAMRRFGSDKPDLRINLE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + +V      S F  F+  ++ +P   V A+    G   +R   D    +    G  GLA
Sbjct: 296 LIDVAALVADSTFTPFTDAVA-HPNGRVAALRIPSGTVLSRKQIDEYAAYTAKYGATGLA 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y   +L  +G +    P+AK  +     ++   +  + GD  FF AG+  K   F +  R
Sbjct: 355 YA--KLAPTGEIT--SPIAKFFSEDAFASLLSHIGAEKGDIVFFGAGNYNKVSDFMSALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG--GMESLKGNDLL 475
               ++  +I  + +   W+ DFP +EW+EE ++    H+PFT P     ++ L+ +   
Sbjct: 411 LKAGKDFALITAD-WRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAIDDIDELRAHART 469

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           ++ +  YD+V NG EI  G IR H  E+    F  +GI+++    +FG L  A   G PP
Sbjct: 470 AL-SRGYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARAKFGFLLDALNYGAPP 528

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           HGGIA GIDRI  L+ G +++R+V  FP +     L+  +PS +S EQL E+
Sbjct: 529 HGGIAFGIDRIAALIAGTESIRDVIPFPKTTGAQCLMTDAPSPISEEQLSEI 580


>gi|312967069|ref|ZP_07781287.1| aspartyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312288533|gb|EFR16435.1| aspartyl-tRNA synthetase [Escherichia coli 2362-75]
          Length = 577

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/580 (37%), Positives = 328/580 (56%), Gaps = 9/580 (1%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75
           +G  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G
Sbjct: 1   MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR
Sbjct: 61  TVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRR 118

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALP
Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME 
Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+
Sbjct: 238 LVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFA 295

Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374
              + +P   V A+   GG    R   D    + +  G  GLAYI       G      P
Sbjct: 296 GPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSP 354

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
           VAK LN    EAI  R   QDGD  FF A +           R  + ++LG+ + + +  
Sbjct: 355 VAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAP 414

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G
Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGG 473

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  
Sbjct: 474 SVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 573


>gi|261868509|ref|YP_003256431.1| aspartyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413841|gb|ACX83212.1| aspartyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 592

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 215/593 (36%), Positives = 335/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  +++G  + LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RSHYCGALNRTNIGQEITLSGWVHRRRDLGGLIFIDMRDREGIVQVCFDPKYQKALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+ ++I + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIQGEVIARPDNQINKNMATGEVEVLAKVLKIYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +++  R +I   +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQHLKTRAKITGFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G+++     +     F  I + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAPEVREIMERMVHGLWQHTLGVDL--GKFPVITWQEAMRRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + +F++F    +   G        +G    R   D   ++    G  GLA++    
Sbjct: 298 DIVKNVDFKIFQGPANDPNGRVTLIRVPQGNEITRKQIDEYTQFVGIYGAKGLAWLKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R+  Q GD  FF A             R  + ++
Sbjct: 358 VNAGLEGVQSPIAKFLNEDVLKALFERVGAQTGDILFFGADKWQTATDSMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E  ++E  +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFE-RDDEGCLAAMHHPFTSPKDFTPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL +++V+  K
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSVANPQALSELSIQVVKTNK 589


>gi|325130764|gb|EGC53499.1| aspartyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 586

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 221/562 (39%), Positives = 331/562 (58%), Gaps = 18/562 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVDL--GDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA- 416
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A D  K  + A  A 
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGA-DKTKVVNEAIGAL 414

Query: 417 RNHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           R  +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D
Sbjct: 415 RIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G 
Sbjct: 475 PANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKN 555
           PPHGG+A G+DR+V L+ GA++
Sbjct: 535 PPHGGLAFGLDRLVTLMTGAES 556


>gi|307107264|gb|EFN55507.1| hypothetical protein CHLNCDRAFT_35428 [Chlorella variabilis]
          Length = 710

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 237/624 (37%), Positives = 355/624 (56%), Gaps = 50/624 (8%)

Query: 5   RTHSCGDLGVSDVG-SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           R+H CG L  +D+G S V + GWV R R  GG++FLD+RDH GI QVV +P       AK
Sbjct: 85  RSHGCGSLTAADLGGSPVTVCGWVDRYRNLGGLLFLDVRDHTGIIQVVVDPQQQPEVAAK 144

Query: 64  S--VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF---GE 117
           +  +R+E+V+ + G + +R  +  N  + TG +E+S   +++L +V  +LP  V     +
Sbjct: 145 AERLRAEYVVAVTGQLRAR--QDPNPRMKTGDLEISPTDVKVLNAVTRKLPFLVSQAEDQ 202

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSP 174
            E P E +R K+R LDLRR  +  N+  R  I+  +R R + +   F+E  TPILT S+P
Sbjct: 203 AETPREELRLKHRVLDLRRPRMADNLRLRHAIVRCIR-RFLEDGHGFLEVETPILTRSTP 261

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA-------PCFRDEDPRS 227
           EGARD+LVPSR+  G +YALPQ+PQ +KQ+LM +GFDRY+Q +        CFRDED R+
Sbjct: 262 EGARDYLVPSRLQAGDWYALPQSPQLFKQMLMVAGFDRYYQASHGAGGSSRCFRDEDLRA 321

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
           DR P EF QLD+EM+++++D I+  ME+++  VF++ + G  V+  F R+ Y +A+ +Y 
Sbjct: 322 DRQP-EFTQLDLEMAWMDRDAIMGLMESMVATVFQQVA-GVDVAAPFQRLSYAEAMAKYA 379

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFS---------KILSVNPGYEVWAIPAKGGGGNR 338
           +DKPDLR  + M  VTE      FRVF+         K + V  G +V     K  G   
Sbjct: 380 SDKPDLRFGLEMAEVTEAVRECGFRVFAGAVAAGGIVKGIRVPDGRQVSNARVKPKG--- 436

Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM----Q 394
              D  NE A + G  GL Y+  R+ E G +    PV + L+     A+  ++      +
Sbjct: 437 ---DVSNE-AVAGGAAGLVYV--RVAEGGAIEAAKPVMEGLSEEQRAALVQQMQASGAGE 490

Query: 395 DGDSCFFIAGDPLKFCSFAAD-ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            GD     AG P    + A D  R ++ + L +I        W++DFP +E NEEE +++
Sbjct: 491 PGDLLLLAAG-PAGAVNKALDRVRLYLGRSLDLIKEGQHSLLWVVDFPMFERNEEEGRLE 549

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
             H+PFT P    + L   DL   +A  YD+V NG EI  G +R +  ++  Q F+ +G+
Sbjct: 550 ALHHPFTAPH--PDDLARGDLAGARALAYDMVYNGVEIGGGSLRIYRRDIQQQVFATIGL 607

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLM 573
           S+E   ++FG L   F+ G PPHGGIA G+DR+ MLL G  ++R+V  FP +      L 
Sbjct: 608 SEEEARSKFGYLLDCFEIGAPPHGGIAFGLDRLAMLLAGVPSIRDVIAFPKTSQAQCALT 667

Query: 574 GSPSTVSVEQLRELGLRIVENPKK 597
           G+P+ V+ +QL+   L + + P K
Sbjct: 668 GAPAGVAADQLQ--ALHVAQLPAK 689


>gi|260582585|ref|ZP_05850375.1| aspartyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094396|gb|EEW78294.1| aspartyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 588

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/591 (37%), Positives = 333/591 (56%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++  ++            F  + + +A+ R+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAREVREIMERMVHDLW--LDTIGVDLGKFPVMTWQEAMCRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    +A+  R++ Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+   + ++  W++DFP +E  +EE  +   H+PFT P+        +D  S  A  Y
Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLESDPTSAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+
Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586


>gi|111220663|ref|YP_711457.1| aspartate tRNA synthetase [Frankia alni ACN14a]
 gi|111148195|emb|CAJ59864.1| aspartate tRNA synthetase [Frankia alni ACN14a]
          Length = 618

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 228/591 (38%), Positives = 324/591 (54%), Gaps = 23/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH C DL    VG  V + GWV   R HG  + F+D+RDH G+ QVV +        + 
Sbjct: 29  RTHLCADLRADHVGRTVSVCGWVAHRRQHGQSLTFVDLRDHSGLLQVVVDG-------SV 81

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122
            VRSE+VL + G V  R   T N  + TG++EL    +EILSVA   P P+    +   E
Sbjct: 82  DVRSEYVLRVTGTVAIRPEGTANPALATGEVELRDCAVEILSVATPPPFPLDDRADAVDE 141

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S R  YR+LDLRR+ + +N+  R+ ++ +MR  +   +F+E  TP+L  S+PEGAR+F+V
Sbjct: 142 STRLAYRYLDLRRERMQRNLRTRSAVLGAMRAALAPLDFVEVETPLLMPSTPEGAREFIV 201

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   GSFYALPQ+PQ +KQLLM  G DRYFQ A C RDED R+DR   EF QLD+EMS
Sbjct: 202 PSRQFPGSFYALPQSPQLFKQLLMVGGTDRYFQFARCLRDEDLRADRQ-YEFTQLDLEMS 260

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+QDD+L+ +   +          +TV     RI + +++ R+G DKPDLR  + +  +
Sbjct: 261 FVDQDDVLDVISAAVLAAARAVRT-DTVP-PIERITWHESMNRFGVDKPDLRFGMELVEL 318

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T  F  S F+ F+   ++  G  V   P      NR   D +   A++ G  GL ++  R
Sbjct: 319 TAIFAGSGFKAFAGAEAIK-GIRV---PGGSAAHNRRRLDDLTTRAKALGAKGLVWM--R 372

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           +   G +    PVAK L+      I    D  +GD    +A      C      RN + +
Sbjct: 373 VGAGGELE--SPVAKFLSADELAGIVAATDAVEGDLLLLVADAWATTCEVLGQLRNDLGR 430

Query: 423 ELGIINCNCFEFCWIMDFP-FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
                      F W++DFP F   +    +    H+PFT P     +   ++ L++++  
Sbjct: 431 PPA--GQGPLRFVWVVDFPLFVGVDPATGRPKPGHHPFTRPHPDDIAKLESEPLAVRSRA 488

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+ SG IR H S +  + F  +GI+ +    RFG     F  G PPHGG A 
Sbjct: 489 YDLVLNGWELGSGSIRIHESALQQRIFGLLGITPDEANARFGFFLTPFGYGAPPHGGFAV 548

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR+V +L G +N+REV  FP +Q+  D L G+P+ V+  QLRELG+R++
Sbjct: 549 GIDRLVAILAGEENIREVIAFPKTQSGLDPLTGAPTQVTDRQLRELGVRVI 599


>gi|28378622|ref|NP_785514.1| aspartyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|308180778|ref|YP_003924906.1| aspartyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|38258331|sp|Q88VQ8|SYD_LACPL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|28271458|emb|CAD64363.1| aspartate--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|308046269|gb|ADN98812.1| aspartyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 598

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/597 (36%), Positives = 339/597 (56%), Gaps = 15/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT   G +    +G  V L GWV + R  G +IF+D+RD  GI Q+V + +  +    +A
Sbjct: 3   RTTYAGLINEDYLGQTVTLQGWVQKRRDLGSLIFIDLRDREGIVQLVFSQEFSADALAVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R E+V+ + G V++R+A+ +N  + TG++E+     +IL+ A+  P  +  +    +
Sbjct: 63  DQLRGEYVIEVQGTVVNRNADAVNDRMKTGKVEVEIHDAKILNKAKTPPFYIQDDINVSD 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + + +  R  I  ++     A  F +  TP LT S+PEGARD+LV
Sbjct: 123 ELRLKYRYLDLRRPEMQRGLKIRNGITQAVHSYFDANGFYDIETPFLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV QG FYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R DR P EF Q+DME S
Sbjct: 183 PSRVYQGHFYALPQSPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQP-EFTQIDMETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I +  E +++ V ++   G  +   F R+ + +A+ R+G++KPD+R  + + ++
Sbjct: 242 FLTAEEIQSYTEGLIKQVMKDV-KGVDIKTPFTRMTWQEAMDRFGSEKPDVRFGMELKDM 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
                ++ F+VF   L+     +  A+P      +R   D   E+ +  G  GLA++  +
Sbjct: 301 GVAVSNAGFKVFDNALANGGLVKAIAVPGGADQYSRKQIDAYTEYVKRFGAKGLAWM--K 358

Query: 363 LDESGNVAGMGPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-ADARNHI 420
           + + G     GPVAK   N  + EAI      + GD   F A D  K  S      R  I
Sbjct: 359 VTDDGF---SGPVAKFFKNDGDFEAITSAAAAKPGDLLLF-AADSFKVVSDTLGYLRTAI 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLK-GNDLLSIK 478
           A+EL +I+ + + + W++D+P +E++E  ++   AH+PFTMP +  +  L  G D     
Sbjct: 415 AKELDLIDQDQYAYLWVVDWPLFEYDEGIERWVPAHHPFTMPNEEDVHYLNDGEDPHKAH 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD++ NG+E+  G IR H  E+  + F  +  +KE  + +FG L  A   G PPHGG
Sbjct: 475 AQSYDIILNGYELGGGSIRIHTRELQEKMFKALDFTKERAQEQFGFLLDALDMGFPPHGG 534

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           +A G+DR  MLL G  N+REV  FP +    + +  +PS VS +QL +L L I  NP
Sbjct: 535 LAIGLDRFAMLLSGNDNIREVIAFPKNSKASEPMTNAPSRVSDQQLADLDLNIT-NP 590


>gi|88861321|ref|ZP_01135952.1| aspartate tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88816700|gb|EAR26524.1| aspartate tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 590

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 217/590 (36%), Positives = 341/590 (57%), Gaps = 11/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG L  + +   V L GW+++ R  GG+IF+D+RD  G+ QVV +P+ A   + A 
Sbjct: 2   RSIYCGQLNKTHLEQTVELCGWINKRRDLGGLIFIDLRDREGVVQVVFDPEVAGLMDTAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    +N+ + TG++E+  + ++I++ +E  PLP+   +   E 
Sbjct: 62  QLRNEFCVKVTGIVRARPQSQVNSGMATGEVEILGKGLQIINRSE--PLPLDFNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 MRLKYRYLDLRRIEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    E ++R ++ E  N +    +F  + Y +A+ RYG+DKPDLRNP+ + +V 
Sbjct: 239 MSSDQVREVTEKMIRQMWNELLNVDL--GDFPVMPYYEAMSRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF+   + NP   V AI   GG   +R   D   ++    G  GLA++   
Sbjct: 297 DLLKDVEFQVFAGPAN-NPKGRVAAISVPGGAELSRKQIDDYTKFIGIYGAKGLAWMKIT 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK L+    EAI  R + Q GD   F   D     + A  A R  + 
Sbjct: 356 DRTLGAEGVQSPVAKFLSADIIEAILTRTNAQTGDIILF-GADKKNIVNEAMGALRIKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L + +   +   W++DFP +E  ++E  +   H+PFT P+    +    D  S  +  
Sbjct: 415 LDLNLTDLKAWAPLWVVDFPMFE-EDDEGTLHAVHHPFTAPKDMTPAQLEADPASAISDA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R   +++   AF  +GI+++  +++FG L  A + G PPH G+A 
Sbjct: 474 YDMVLNGYEVGGGSVRIFNNDMQATAFRILGINEQEQQDKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+ MLL G  N+R+V  FP +     LL  +PS  + + L+EL + +
Sbjct: 534 GLDRLTMLLCGTDNIRDVIAFPKTTQASCLLTNAPSIANPDSLKELAVAV 583


>gi|71275957|ref|ZP_00652239.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella
           fastidiosa Dixon]
 gi|71901399|ref|ZP_00683491.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella
           fastidiosa Ann-1]
 gi|71163190|gb|EAO12910.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella
           fastidiosa Dixon]
 gi|71728832|gb|EAO30971.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella
           fastidiosa Ann-1]
          Length = 589

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 224/600 (37%), Positives = 341/600 (56%), Gaps = 23/600 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI Q+  +       +S  
Sbjct: 2   RTHFCGLINETLIGHTVTLAGWTDVARNLGGVCFIDLRDHEGIVQITVDSRAIDQNNSEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A  +  E VL ++G+V +R A  +N  I TG++E+ A KI+IL+ A   PLP     
Sbjct: 62  FKVASGLSYEDVLQVEGVVCARHA--VNDKIKTGKVEVIATKIKILNKAA--PLPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E IR KYR+LDLRR  + +    R +++ ++R  +    F +  TPILT ++PEGAR
Sbjct: 118 NPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADR-QLEFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E ++R VF+E + G  +   F R+ + +A+RR+G+DKPDLR  + 
Sbjct: 237 MEFAFVSERDVQDFVEEMIRRVFKEVA-GIELDTTFPRMTWKEAMRRFGSDKPDLRINLE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + +V      S F  F+  ++ +P   V A+    G   +R   D    +    G  GLA
Sbjct: 296 LIDVAALVADSTFTPFTDAVA-HPNGRVAALRIPSGTVLSRKQIDEYAAYTAKYGATGLA 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y   +L  +G +    P+AK  +     ++   +  + GD  FF AG+  K   F +  R
Sbjct: 355 YA--KLAPTGEIT--SPIAKFFSEDAFASLLSHIGAEKGDIVFFGAGNYNKVSDFMSALR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG--GMESLKGNDLL 475
               ++  +I  + +   W+ DFP +EW+EE ++    H+PFT P     ++ L+ +   
Sbjct: 411 LKAGKDFALITAD-WRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAIDDIDELRAHART 469

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           ++    YD+V NG EI  G IR H  E+    F  +GI+++    +FG L  A   G PP
Sbjct: 470 ALSR-GYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARVKFGFLLDALNYGAPP 528

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDRI  L+ G +++R+V  FP +     L+  +PS +S EQL E+ + I + P
Sbjct: 529 HGGIAFGIDRIAALIAGTESIRDVIPFPKTTGAQCLMTDAPSPISEEQLSEIHV-ITKKP 587


>gi|325496991|gb|EGC94850.1| aspartyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 577

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/580 (37%), Positives = 328/580 (56%), Gaps = 9/580 (1%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75
           +G  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G
Sbjct: 1   MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR
Sbjct: 61  TVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRR 118

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALP
Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME 
Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+
Sbjct: 238 LVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFA 295

Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374
              + +P   V A+   GG    R   D    + +  G  GLAYI       G      P
Sbjct: 296 GPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSP 354

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
           VAK LN    EAI  R   QDGD  FF A +           R  + ++LG+ + + +  
Sbjct: 355 VAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAP 414

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G
Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGG 473

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  
Sbjct: 474 SVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANPTALSELSIQVVKK 573


>gi|312969907|ref|ZP_07784090.1| aspartyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|310338192|gb|EFQ03281.1| aspartyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|320198060|gb|EFW72668.1| aspartyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323152645|gb|EFZ38921.1| aspartyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323158649|gb|EFZ44663.1| aspartyl-tRNA synthetase [Escherichia coli E128010]
 gi|323180663|gb|EFZ66208.1| aspartyl-tRNA synthetase [Escherichia coli 1180]
 gi|323186358|gb|EFZ71708.1| aspartyl-tRNA synthetase [Escherichia coli 1357]
          Length = 577

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/580 (37%), Positives = 328/580 (56%), Gaps = 9/580 (1%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75
           +G  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G
Sbjct: 1   MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR
Sbjct: 61  TVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRR 118

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALP
Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME 
Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+
Sbjct: 238 LVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFA 295

Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374
              + +P   V A+   GG    R   D    + +  G  GLAYI       G      P
Sbjct: 296 GPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSP 354

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
           VAK LN    EAI  R   QDGD  FF A +           R  + ++LG+ + + +  
Sbjct: 355 VAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAP 414

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G
Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGG 473

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  
Sbjct: 474 SVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 573


>gi|303279314|ref|XP_003058950.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460110|gb|EEH57405.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 679

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 236/604 (39%), Positives = 346/604 (57%), Gaps = 32/604 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H+ GDL  +DVG  V L GWV + R  GGI+F D+RDH G+ QVV++ D  S      
Sbjct: 65  RSHAAGDLRDADVGDVVTLCGWVDKQRDMGGIVFADVRDHTGLCQVVSDADTPSRAVAAL 124

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGERE-- 119
            ++R+EWV+ + G V +R+A   N  I TG +E++A ++++L+V  + LP  + G  E  
Sbjct: 125 AAMRAEWVVRVRGRVKARTAP--NDKIPTGAVEVAADEVDVLNVVGKSLPFAIGGGGEED 182

Query: 120 -------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTA 171
                    E +R K R LDLRR  + KN+  R + + ++R  +  ++ F+E  TP+LT 
Sbjct: 183 DDAAGGGASEEVRLKNRVLDLRRPRMVKNLRLRAKTVRALRGVLEDDHGFLEIETPMLTR 242

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           S+PEGARD+LVPSR+  G+ YALPQ+PQ +KQ+LM +G DRY+Q+A CFRDED R+DR P
Sbjct: 243 STPEGARDYLVPSRLQPGACYALPQSPQLFKQMLMVAGADRYYQVARCFRDEDLRADRQP 302

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF QLD+EM+F + D IL+  E+++   F+E  +  T+   F R+ Y +A+ +YG+DKP
Sbjct: 303 -EFTQLDIEMAFTDMDGILSLGEDLMCAAFKEGVD-VTLPRPFPRMTYAEAMSKYGSDKP 360

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN------ 345
           D+R  +    +T+      F++FS   S N G  V AI    G   R    R+       
Sbjct: 361 DVRYGLEFTTITDIASRCAFKLFSGAASEN-GGAVKAIRVPDG--KRLSNSRLKPKGDVC 417

Query: 346 EWARSQGQPGLAYIFWRLDESG-NVAGMG-PVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403
             A   G  GLA  F R+ E G ++ G G  + + L  V  E I        GD   F A
Sbjct: 418 AEAIKGGAGGLA--FARVGEDGVSLEGGGKALCEGLADVAGEIIDA-CGAGAGDVVLFGA 474

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463
           GD           R ++A+ L +I  +     WI +FP +E NE+E +++  H+PFT P 
Sbjct: 475 GDESVVNKSLDRVRQYVAKTLDMIPDDAHAVLWITEFPMFEKNEDEDRLEALHHPFTAPN 534

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
              +   G D+   +A  YDLV NG E+  G +R +  +V  + F  +G+SKE  E +FG
Sbjct: 535 QD-DVRDGGDITKARAVAYDLVYNGVEVGGGSLRIYRRDVQEKVFDAIGLSKEEAEEKFG 593

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            L  AFQ G PPHGG+A G+DR+VM+L GA ++R+V  FP +     LL  +P +VS  Q
Sbjct: 594 YLMDAFQFGAPPHGGMAFGLDRLVMMLAGASSIRDVIAFPKTATAQCLLTSAPGSVSDAQ 653

Query: 584 LREL 587
           L +L
Sbjct: 654 LADL 657


>gi|289450177|ref|YP_003475045.1| aspartate--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184724|gb|ADC91149.1| aspartate--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 598

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 227/591 (38%), Positives = 331/591 (56%), Gaps = 14/591 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
           +R+  C ++  + VG  V L GW H+ R  GG+IF+ +RD  G  Q+  N  S  A    
Sbjct: 10  HRSCMCAEVTDNQVGEQVTLMGWCHKQRDLGGLIFITLRDRSGEIQICVNESSPEAARTA 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A   RSE+VL + G V  RSA   N  + TG IE+ A +I ILS AE  P  +    +  
Sbjct: 70  AAKTRSEYVLAVIGKVSRRSAP--NPQMKTGNIEILADEIRILSEAETPPFYIEEGMQAK 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +S+R KYR+LDLRR  + + ++ R  I N +        F+E  TP+L  S+PEGARD+L
Sbjct: 128 DSLRLKYRYLDLRRPDMQRTLILRHNITNIIHRYFNEHGFLEIETPMLGRSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  G F+ALPQ+PQ YKQLLM +G+DRY QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 188 VPSRVFPGHFFALPQSPQLYKQLLMVAGYDRYVQIARCFRDEDLRADRQP-EFTQVDLEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV   D+   +E +L  +F E   G  +     R+ Y +A+ R+G+DKPDLR  + ++N
Sbjct: 247 SFVNPIDVQTVVEGLLAEIFAEI-KGIKIDLPLQRMPYAEAMERFGSDKPDLRFAMEINN 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIF 360
           V++     +F VF   L++ P   V  I   G     R   D + E+ ++    GLA++ 
Sbjct: 306 VSDWAAKLDFAVFKNALAL-PKGRVACIQVPGAASMTRKQIDSLGEFVKTYRASGLAWLA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +  +  G+        K +  V+   I+ +L ++DGD   F+A             R  +
Sbjct: 365 FGAETRGS------FLKFVTDVDIAEIKQKLSVKDGDLLLFVADKYQVVQDSLGQLRCEV 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ L +I+ N ++  W+ +FP  E++EEE +    H+PFT P      L  +D  +++A 
Sbjct: 419 AKRLNMIDENQYKLLWVTEFPLLEYSEEEHRYTAMHHPFTSPMEEDLPLLTSDPGAVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  ++  Q F  +G ++E     FG L  AF+ G+ PHGG A
Sbjct: 479 AYDVVLNGTELGGGSIRIHDQDLQKQMFGLLGFTEEQAFANFGFLLEAFRYGVAPHGGCA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VM L G  ++R+V  FP  Q   DL+  +P TVS +QL EL L +
Sbjct: 539 LGLDRLVMKLSGITDIRDVIAFPKVQTSADLMTMAPGTVSDKQLAELKLNL 589


>gi|209695353|ref|YP_002263282.1| aspartyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|238064703|sp|B6EGJ1|SYD_ALISL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|208009305|emb|CAQ79571.1| aspartyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 591

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 229/598 (38%), Positives = 338/598 (56%), Gaps = 15/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG+L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD    F  A 
Sbjct: 2   RSHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMKDIFSTAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ +   G V  R    +N ++ TG++EL A  +EI++ +E LPL     +   E 
Sbjct: 62  QLRNEFCIKFTGEVRVRPDSQVNKDMSTGEVELYATGLEIINRSEALPLDF--NQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R KYR++DLRR  +   I  R R  + +R R + EN F++  TP+LT ++PEGARD+LV
Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVR-RFLDENLFLDIETPVLTKATPEGARDYLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E S
Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  + + +  E ++  +++E  +       F  + + +AIRR+G+DKPDLRNP+ + ++
Sbjct: 238 FLSSNQVRDITERLVHDMWKELLDVEL--GQFPIMKFSEAIRRFGSDKPDLRNPLELVDI 295

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VF+   +   G  V  I   GG   +R   D   ++    G  GLA++  
Sbjct: 296 ADLLKDVEFQVFAGPANDEKG-RVAVIRVPGGASLSRKQIDEYGKFVGIYGAKGLAWMKV 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHI 420
               +G      PVAK LN      I  R + + GD   F A D     S A  A R  +
Sbjct: 355 NDRAAGLEGVQSPVAKFLNADVVNGILERTEAESGDIILFGA-DKANIVSEAMGALRIKL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
             +L + +   +   W++DFP +E  + E  +   H+PFT P G   E LK N   +  +
Sbjct: 414 GDDLELTDKKAWAPLWVIDFPMFE-EDGEGNLHAMHHPFTSPLGMTAEELKVNP-AAANS 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+
Sbjct: 472 DAYDMVINGYEVGGGSVRIHNAEMQTAVFGILGIEAKEQQEKFGFLLEALKYGTPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+ MLL G +N+R+V  FP +     LL  +PS  + + L EL + +    KK
Sbjct: 532 AFGLDRLAMLLCGTENIRDVIAFPKTTAAACLLTNAPSPANPDSLAELAIAVKFAEKK 589


>gi|323186874|gb|EFZ72193.1| aspartyl-tRNA synthetase [Escherichia coli RN587/1]
          Length = 577

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/580 (37%), Positives = 327/580 (56%), Gaps = 9/580 (1%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75
           +G  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G
Sbjct: 1   MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR
Sbjct: 61  TVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRR 118

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALP
Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME 
Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++R ++ E         +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+
Sbjct: 238 LVRHLWLEVKGVEL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFA 295

Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374
              + +P   V A+   GG    R   D    + +  G  GLAYI       G      P
Sbjct: 296 GPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSP 354

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
           VAK LN    EAI  R   QDGD  FF A +           R  + ++LG+ + + +  
Sbjct: 355 VAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAP 414

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G
Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGG 473

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  
Sbjct: 474 SVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 573


>gi|52424763|ref|YP_087900.1| aspartyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|62287543|sp|Q65UP5|SYD_MANSM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|52306815|gb|AAU37315.1| AspS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 590

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/596 (36%), Positives = 335/596 (56%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L   ++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RSHYCGGLNRENIGQEVTLSGWVHRRRDLGGLIFIDMRDREGIVQVCFDPKYQQALTRAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+ + I G V++R    IN N+ TG++E+ A+++ + + A+ LPL     +   E 
Sbjct: 63  SLRNEFCIQIKGEVIARPDNQINKNMATGEVEVLAKELSVYNAADVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++   +  N     F  + + +A++R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAPEVREIMEKMIHGLW--LNTINVDLGKFPVMTWTEAMQRFGSDKPDLRNPLEITDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V  I    G    R   D   ++    G  GLA++   
Sbjct: 298 DIVKDVDFKVFSGPAN-DPNGRVAVIRVPNGASVTRKQIDEYTQFVGIYGAKGLAWLKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK L     +AI  R   Q GD  FF   D  +  + A  A R  + 
Sbjct: 357 DVNAGLEGVQSPIAKFLTEEKIKAIFDRTSAQTGDILFF-GADKWQTATDALGALRLKLG 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +   + +   W++DFP +E  +EE  +   H+PFT P+         D     A  
Sbjct: 416 RDLALTQLDQWAPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTGAVANA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R    ++    F  +GI ++    +FG L  A + G PPH G+A 
Sbjct: 475 YDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEQQQREKFGFLLDALKFGTPPHAGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+ MLL G  N+R+V  FP +     L+  +PS  + + L EL + +V+  K+
Sbjct: 535 GLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPQALEELSISVVKTDKE 590


>gi|13357846|ref|NP_078120.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761954|ref|YP_001752370.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920413|ref|ZP_02931733.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508678|ref|ZP_02958171.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701928|ref|ZP_02971573.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|27923864|sp|Q9PQK5|SYD_UREPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|11271291|pir||D82910 aspartyl-tRNA synthetase UU286 [imported] - Ureaplasma urealyticum
 gi|6899259|gb|AAF30695.1|AE002125_6 aspartyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827531|gb|ACA32793.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902855|gb|EDT49144.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675596|gb|EDT87501.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700672|gb|EDU18954.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 578

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 213/586 (36%), Positives = 340/586 (58%), Gaps = 18/586 (3%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           CG +G   +   V L+GWV +VR  G ++F+D++D +GI Q+ A      F     +  E
Sbjct: 5   CGYIGEEHLEKNVILNGWVKKVRKMGNLVFVDLKDRFGIVQIFATKSDGVFNELTQLSRE 64

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ ++GLV+ R  +  N ++ TG+ E+  +KI I S A+  PL +  E +  E IRF+Y
Sbjct: 65  DVINVEGLVLLR--KNPNNDLKTGRFEIHVKKILIYSKAKTPPLIIEDETDANEEIRFRY 122

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRRD   K    R+++  + R  + +++FIE  TPIL   +PEGARDF VP+R  +
Sbjct: 123 RYLDLRRDVNLKIFELRSKVYQAFRNYLYSQDFIETETPILAKPTPEGARDFYVPTRTRK 182

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ +KQLLM +GF +YFQI  CFRDED RSDR P EF Q+D+E+SF ++ +
Sbjct: 183 --FYALPQSPQTFKQLLMVAGFQKYFQITKCFRDEDLRSDRQP-EFTQVDIELSFADEIE 239

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +EN+L+ VF++  N + ++  F+R+ Y+ AI  YG+DKPDLR  + +  +  +F +
Sbjct: 240 IQTLIENLLKYVFKQTINVD-LTTPFMRMSYEQAINDYGSDKPDLRFDLKIKTLNTYFEN 298

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           S+   F K L  N       +P      N+     + ++A+ +G  GL++I  + DE   
Sbjct: 299 SKTLFFQKALLNNQSIRAILVP--NINLNKKQVQTLEKFAKDKGAKGLSWISIK-DEKII 355

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNHIAQELGII 427
              +  + +   I  T    +  D         +  D     S A    R ++A  L + 
Sbjct: 356 DGSLLSIQEDHIIYKT----IFKDFNLSTGSILLVADTFDIASQALGLVRINLASILNLK 411

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL--LSIKAFQYDLV 485
             N F+F WI+D+P YE++ E ++   AH+PFTMP   +E+L   D+     +   YD+V
Sbjct: 412 KPNIFKFVWIIDWPLYEYDNEAQRFVAAHHPFTMP--TLETLNTFDVNKKDARGRSYDIV 469

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
            NG+E+  G +R    ++  + F ++ +S E    +FG L  AF+ G+PPH GIA G+DR
Sbjct: 470 LNGYELGGGSVRIIDQQIQRRMFKSINMSDEEANLKFGFLLTAFEYGVPPHCGIALGLDR 529

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           ++M+L+ ++ +R+V  FP + N  D+++ +PS ++ E L+ELGL+I
Sbjct: 530 LMMILVNSEYIRDVVAFPKNNNGVDMMLDAPSNMNDEDLKELGLKI 575


>gi|33151787|ref|NP_873140.1| aspartyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|38372511|sp|Q7VNF0|SYD_HAEDU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33148008|gb|AAP95529.1| aspartyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 589

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/589 (37%), Positives = 335/589 (56%), Gaps = 11/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S VG  V LSGWVHR+R  G  IF+ IRD  GI QV  +  D   F++A 
Sbjct: 3   RSHYCGTLNRSHVGQAVTLSGWVHRIRNLGRFIFMQIRDREGIVQVFFDEKDDTLFKVAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E  + I G V++R    IN  + TG+IE+  Q + + + AE LPL  F +    E 
Sbjct: 63  QLRAEACVQIQGQVIARDEAQINPEMATGEIEVLVQNVLVYNNAEVLPLD-FNQNNTEEQ 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +N+  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 122 -RLKYRYLDLRRHKMAENLKTRAKITSFVRRYMDEHGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   MEN++  ++      N     F  + + +A++ +G+DKPDLRNP+ + ++ 
Sbjct: 240 LTAEEVRALMENMIHSLW--LDRLNVDLGKFPIMSWQEAMQHFGSDKPDLRNPLELVDIA 297

Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + EF VF++  +   G   V  +P  G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKNVEFNVFNEPANAIDGRVTVLRVP-NGATLTRKQIDEYTQFVAIYGAKGLAWAKIN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK LN     A+  R   Q+GD  FF   D  +  + A  A R  I 
Sbjct: 357 DINAGMDGIQSPVAKFLNAEIFNALIERTAAQNGDILFF-GADKWQVVTDAMGALRLKIG 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L + +   ++  W++DFP +E  + E  +   H+PFT P+         D +   A  
Sbjct: 416 RDLALTDQTAWKPLWVIDFPMFE-RDGEGNLSAMHHPFTAPKDLSPDQLAADPIKAVANA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R    ++    F+ +GI+++  + +FG L  A + G PPH G+A 
Sbjct: 475 YDMVINGYEVGGGSVRIFDPKMQQTVFNILGINEQDQQEKFGFLLDALKFGTPPHAGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L+EL ++
Sbjct: 535 GLDRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSYANPQVLQELAIQ 583


>gi|167855752|ref|ZP_02478507.1| aspartyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853149|gb|EDS24408.1| aspartyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 589

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 223/590 (37%), Positives = 341/590 (57%), Gaps = 13/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  + VG  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+ A 
Sbjct: 2   RSHYCGVLNRTHVGEQVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEALFKQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E  + I G V++R    IN  + TG+IE+  +++ + + ++ LPL     +   E 
Sbjct: 62  ALRAEACVQIKGEVIARDTSQINKEMATGEIEVLVKELVVYNNSDVLPLDF--NQNNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMAERLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E +F
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETTF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++RG++      N     F ++ + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPEVRAMMEKMIRGLW--LDRLNVDLGEFPQMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +P   V  I    G    R   D   ++  + G  GLA+    
Sbjct: 297 DILKDVEFKVFSGPAN-DPEGRVAVIRVPNGAEITRKQIDEYTQFVGNYGAKGLAWAKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK L     +A+  R++ Q+GD  FF   D  K  + A  A R  + 
Sbjct: 356 DVNAGLEGLQSPIAKFLTDDVVKALLARVNAQNGDIIFF-GADSEKVVTDAMGALRLKVG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++LG+ +   ++  W++DFP +E  ++E      H+PFT P+    E L  N   ++ A 
Sbjct: 415 RDLGLTDLTAWKPLWVVDFPMFE-KDDEGNWSAMHHPFTAPKDLSPEELVQNPKGAV-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R    ++    F  +GI++E  + +FG L  A + G PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIFDPKMQQTVFGILGINEEEQKEKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G+DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L EL ++
Sbjct: 533 FGLDRLTMLITGTENIRDVIAFPKTTAAACLMTDAPSFGNPKALAELAIQ 582


>gi|331703342|ref|YP_004400029.1| aspartyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328801897|emb|CBW54050.1| Aspartyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 574

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/589 (35%), Positives = 334/589 (56%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L ++++   V L GWV ++R  G ++F+D++D YGITQ+V   D    ++  +
Sbjct: 3   RTHTCGELTINNIDQEVILQGWVKKIRKLGAMVFIDLKDRYGITQLVV--DQQHIDLINN 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           V++E+V+ I G V+ R  ++IN  ++TG+IE+  + + +++ +E  P  +  +    E  
Sbjct: 61  VKNEYVIEIKGNVVKR--KSINKELVTGEIEVIVKDLLVINKSELTPFVLENDVNVNEDT 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  YR+LDLRR  +  N++ R +I + +R  +   NF+E  TP    S+PEGARDFLVPS
Sbjct: 119 RLTYRYLDLRRQVMQNNLIIRAKINHIIRNFLTDSNFLEVETPYFAKSTPEGARDFLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+N+  FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R DR P EF QLD+EMSF 
Sbjct: 179 RLNKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQP-EFTQLDLEMSFA 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             +D++   E++++ + +E  N   V    LR+ Y DAI  YG+DKPDLR  + +H + +
Sbjct: 238 TSEDVMQISESLIKKILKEVRNFE-VKEPLLRLSYKDAIDLYGSDKPDLRYDLKIHTLND 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++  +  +     NP   + AI        +   D +N+ A+      +A+I +   
Sbjct: 297 IFKNTNIKFLN-----NPDLFIRAICIDQLLSKKQLED-LNQQAKQFNFNSIAFIKF--- 347

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E+ N +  G +A  L     E +    D+++  +     G   +        R  +A+  
Sbjct: 348 ENNNWS--GSLASQLTENEKELLIKEFDIKNKATIILNIGKYAEISQLMGAIRISLAKMF 405

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            +   + F+  W++DFP +E++E+E +   AH+PFT P+    +    +     A  YDL
Sbjct: 406 NLETKDDFKLLWVVDFPLFEFSEKENRYVAAHHPFTSPKEECLTDFDTNKKDALACAYDL 465

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NGFEI  G  R    E+  + F  V ++ + VE  FG    A++ G P H GIA G+D
Sbjct: 466 VMNGFEIGGGSQRITNPEIQQRMFDAVELTAQQVETNFGWFMNAYKYGAPYHAGIAWGLD 525

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           RI M+L  + ++R+V  FP +    D++  +P  VS +QL EL ++IV+
Sbjct: 526 RISMILTDSNSIRDVIAFPKNSLGIDMMSNAPDLVSEKQLEELNIKIVK 574


>gi|238919498|ref|YP_002933013.1| aspartyl-tRNA synthetase, [Edwardsiella ictaluri 93-146]
 gi|259511858|sp|C5B9S7|SYD_EDWI9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238869067|gb|ACR68778.1| aspartyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 591

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 227/591 (38%), Positives = 337/591 (57%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L +S VG  V L GWVHR R  GG+IF+D+RD  G+ QV  +PD    F  A 
Sbjct: 2   RTNYCGQLNLSHVGQEVTLCGWVHRRRDLGGLIFIDLRDREGVVQVFFDPDHQDAFRQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R     N+ + TG+IE+    + +++ AE  PLP+   +   E 
Sbjct: 62  ELRNEFCVQVTGTVRARPESQRNSEMPTGEIEVFGHGLTLINRAE--PLPLDFNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I   +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 NRLKYRYLDLRRPEMAARLKTRAKITAFVRRFMDNHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME + R ++ E    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSAGQVREIMEALARALWMEIKGVDL--GDFPVMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  V A+   GG    R   D   ++    G  GLA++   
Sbjct: 297 DLVKSVDFKVFSGPANDARG-RVIALRVPGGATLTRKNIDEYGQFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      P+AK LN    E I  R   Q GD  FF A D  K  + A  A R  + 
Sbjct: 356 DRAAGMDGVQSPIAKFLNAEVLEGILARSGAQSGDIIFFGA-DSAKVATDAMGALRLKVG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++L + + + +   W++DFP +E  + E  +   H+PFT P+    E+LK N + +I A 
Sbjct: 415 RDLQLTDESRWAPLWVVDFPMFE-EDGEGGLAAMHHPFTSPRDISPEALKANPVGAI-AN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H   +    F  +GI+++    +FG L  A + G PPH G+A
Sbjct: 473 AYDMVMNGYEVGGGSVRIHSGAMQSAVFDILGINEQEQREKFGFLLDALKFGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VMLL G +N+R+V  FP +      L  +PS  +   L+EL + +
Sbjct: 533 FGLDRLVMLLTGTENIRDVIAFPKTTAAACPLTDAPSRANPAALQELSIAV 583


>gi|326343796|gb|EGD67558.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 577

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/580 (37%), Positives = 328/580 (56%), Gaps = 9/580 (1%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75
           +G  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G
Sbjct: 1   MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR
Sbjct: 61  TVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRR 118

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALP
Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME 
Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+
Sbjct: 238 LVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLRSVEFAVFA 295

Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374
              + +P   V A+   GG    R   D    + +  G  GLAYI       G      P
Sbjct: 296 GPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSP 354

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
           VAK LN    EAI  R   QDGD  FF A +           R  + ++LG+ + + +  
Sbjct: 355 VAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAP 414

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G
Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGG 473

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  
Sbjct: 474 SVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIQVVKK 573


>gi|251793073|ref|YP_003007799.1| aspartyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534466|gb|ACS97712.1| aspartyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 592

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 215/591 (36%), Positives = 337/591 (57%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  +++G  + LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RSHYCGALNRTNIGQEITLSGWVHRRRDLGGLIFIDMRDREGIVQVCFDPKYQEALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+ ++I + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIQGEVIARPDNQINKNMATGEVEVLAKVLKIYNTSDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +++  R +I   +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQHLKIRAKITGFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G+++     +     FL + + +A+ R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAPEVREIMERMVHGLWQHILGVDL--GKFLVMTWQEAMTRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   + EF+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKNVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    +A+  R+  Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPIAKFLNENVWKALAERVKAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+   + ++  W++DFP +E  ++E  +   H+PFT P+         +     A  Y
Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDDEGNLAAMHHPFTSPKDFTPEQLEAEPTDAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F  +GI+++    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGINEQEQREKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL +++V+
Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALTELSIQVVK 586


>gi|319775815|ref|YP_004138303.1| aspartyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|317450406|emb|CBY86622.1| aspartyl-tRNA synthetase [Haemophilus influenzae F3047]
          Length = 588

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 219/591 (37%), Positives = 332/591 (56%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELCIYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++  ++            F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHDLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVDFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+ K LN    +A+  R++ Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPITKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+   + ++  W++DFP +E  +EE  +   H+PFT P+         D  S  A  Y
Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+
Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586


>gi|189501606|ref|YP_001957323.1| aspartyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|238692323|sp|B3EUH5|SYD_AMOA5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189497047|gb|ACE05594.1| aspartyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
          Length = 582

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 218/591 (36%), Positives = 331/591 (56%), Gaps = 21/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L +  +G  V L GWV ++R  G ++++D+RD YGITQ++        EI   
Sbjct: 3   RTHTCGELRLQHIGISVTLCGWVQKIRNKGSLVWIDLRDRYGITQLILEEHITAPEILSQ 62

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           V+    E+V+   G V+ RSA+  N ++ TG IE+  + + IL+ A+  P  +  + +  
Sbjct: 63  VQHIGREYVIQATGSVIERSAK--NPSMPTGDIEIEVKSLTILNTAKTPPFLIEEQTDGG 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +YR+LDLRR  L KN++ R  +    R  +   +F++  TP+L  S+P GARDF+
Sbjct: 121 EELRMQYRYLDLRRPPLQKNLLLRQLVAQHARAYLEQHHFVDVETPLLIKSTPGGARDFV 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++   FYALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF Q+D E+
Sbjct: 181 VPSRIHPQQFYALPQSPQIFKQLLMVAGLDRYYQIAKCFRDEDFRADRQP-EFTQIDCEL 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV Q DIL+  EN  + +FE  +      + F  I Y +A+++YGTDKPD+R  + +  
Sbjct: 240 SFVTQADILHIFENFTKYIFE--ATIQVRLDKFPCITYAEAMQKYGTDKPDIRFGMRLIE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQG--QPGLAY 358
           +TE   +SEF +F +         +  I  KG     R   D + E+ +       GL Y
Sbjct: 298 LTELVKNSEFPLFKQ------AKLIAGICVKGCADYTRKQLDDLTEYIKKLNLVTSGLVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           + +  D S N     PV+K  ++        ++    GD    +AG+           R 
Sbjct: 352 VKYLADGSFN----SPVSKFYDVEQLTLWAKQMHAVPGDLLLILAGEIEATQIALGSLRL 407

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  EL +++ + F   W++DFP  EWNEE ++    H+PFT P+     L      +++
Sbjct: 408 KLRDELHLVSKDKFAPLWVVDFPLLEWNEESQRYVSRHHPFTSPKQEDIELLSTKPETVR 467

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG EI  G IR H   +  Q F+ +G S+E    +FG L  AF+ G PPHGG
Sbjct: 468 ANAYDLVINGMEIGGGSIRIHDRALQEQIFNVLGFSEEEARQQFGFLTDAFEYGAPPHGG 527

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           IA G DR+  ++    ++R    FP +    D++M +PST++ +Q+ ELG+
Sbjct: 528 IAFGFDRLCAIIGREDSIRPFIAFPKNNAGRDVMMKAPSTITEQQISELGI 578


>gi|320188567|gb|EFW63229.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|326342246|gb|EGD66027.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
          Length = 577

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/580 (37%), Positives = 328/580 (56%), Gaps = 9/580 (1%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75
           +G  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G
Sbjct: 1   MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR
Sbjct: 61  TVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRR 118

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALP
Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME 
Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+
Sbjct: 238 LVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLRSVEFAVFA 295

Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374
              + +P   V A+   GG    R   D    + +  G  GLAYI       G      P
Sbjct: 296 GPAN-DPKGRVAALCVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSP 354

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
           VAK LN    EAI  R   QDGD  FF A +           R  + ++LG+ + + +  
Sbjct: 355 VAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAP 414

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G
Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGG 473

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  
Sbjct: 474 SVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIQVVKK 573


>gi|256847120|ref|ZP_05552566.1| aspartyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715784|gb|EEU30759.1| aspartyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 590

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 226/596 (37%), Positives = 341/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RT+  G    S +G  V L GWV + R  GG+IF+D+RD  GI Q+V     D A F++A
Sbjct: 3   RTNYAGRTNESQIGEEVVLKGWVAKRRNLGGLIFIDLRDREGIVQLVFDEKQDPAAFKVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE++L + GLV  R+   IN ++ TG+IE+  ++  IL+ ++  P  V    +  E
Sbjct: 63  NECRSEYILEVRGLVRERA--EINPDLPTGKIEVEVKEANILAKSQTPPFEVKDNVDASE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR++DLRR  + KN+  R+++ + +       +F++  TP LT S+PEGARDFLV
Sbjct: 121 DLRLQYRYIDLRRPEMMKNMKLRSKVASIIHNYYDNNDFMDVETPDLTRSTPEGARDFLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQLLMA+G DRY+Q+A CFRDED R DR P EF Q+D EMS
Sbjct: 181 PSRLYPGHFYALPQSPQLFKQLLMAAGVDRYYQMARCFRDEDLRGDRQP-EFTQVDTEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +DI +  E +++ V +E  N + V   F R+ + +A+ RYG+DKPD R  +++ ++
Sbjct: 240 FATAEDIQDMTEGLIKRVMKEALNVD-VKTPFPRMEWQEAMDRYGSDKPDTRFGMLITDL 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD--RMNEWARSQGQPGLAYIF 360
           ++    S F+VFS   +V  G  V AI   GG  + +  D  +  ++ +  G  GLA++ 
Sbjct: 299 SDIVKDSSFKVFSG--TVADGKFVRAICVPGGADHYSRKDITKKEDYIKRYGAKGLAWVK 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+AK +N +    I  RL  ++GD   F+A             R  I
Sbjct: 357 VTADGYN-----GPIAKFINDL-AAPINERLGAKEGDLILFVADSFHVVADSLGYLREKI 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLK-GNDLLSIK 478
           A E+ +I    + + W++++P +E++E   K   AH+PFTM  +  +  L+ G D     
Sbjct: 411 AHEMDMIKPGQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAH 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD++ NG EI  G IR H  ++  + F  +G +KE    RF  L +  + GMPP GG
Sbjct: 471 AQSYDIILNGNEIGGGSIRIHDPKIQEKVFKALGYTKEEARARFNFLIKGLENGMPPEGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G DR VMLL GA N+R+V  FP +    + +  +P TV  EQL EL + + ++
Sbjct: 531 LAFGFDRWVMLLAGADNIRDVIPFPKNSKGIEPMTAAPGTVDQEQLDELHIDVKDD 586


>gi|24380186|ref|NP_722141.1| aspartyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|46577481|sp|Q8DSG3|SYD1_STRMU RecName: Full=Aspartyl-tRNA synthetase 1; AltName:
           Full=Aspartate--tRNA ligase 1; Short=AspRS 1
 gi|24378190|gb|AAN59447.1|AE015009_7 putative aspartyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 583

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 221/588 (37%), Positives = 326/588 (55%), Gaps = 17/588 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  V   GWV  +R HG + F+++RD  G+ QV  +   A F+    +  E
Sbjct: 6   IGNYGLEQVGQKVTAKGWVANIRNHGKLAFIELRDREGLLQVFVDSAVADFDKLHDLHKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            +L + G +++R    +N +I +GQ+EL A+ IEI++ ++ LP  +       E IR KY
Sbjct: 66  SILAVTGEIVARDERFVNPHIKSGQVELRAETIEIIASSKLLPFELDNHAHAGEDIRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++  ++R  +   +FI+  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTANLKLRHQVTKAIRDYLNQADFIDVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+EMSFV ++D
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLEMSFVSEED 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           + N +E +L+ V +  S G  ++  F  I Y  A+RR+G+DKPD R  + + ++TE    
Sbjct: 245 VRNLVEGMLKAVVKA-SKGIELTEAFPIISYAQAMRRFGSDKPDTRFAMELKDLTELSRG 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR-MNEWARSQGQPGLAYIFWRLDESG 367
           +      K L    G  V  I AK     +AF +R M    +     G+A       E G
Sbjct: 304 NTSLFLQKGLKKENGV-VMGICAKNAA--KAFTNRQMATLKQLVMDFGVAGFATATIEKG 360

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
            V   G +       NTE + +  + +DGD  FF+ G   +        R  +A++L +I
Sbjct: 361 QVT--GSLKSTFKDHNTELLEL-FEAEDGDMIFFVTGSLKRVQEALGGLRVRLAKDLELI 417

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL----SIKAFQYD 483
           + +   F W++D+P  EWNE+  +    H+PFT  QG  E   G+D       + +  YD
Sbjct: 418 DNDKLNFLWVVDWPLLEWNEDLNRYQAMHHPFT--QGAFED--GSDWKENPEKMMSRAYD 473

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+EI  G +R H        F  +G+ KE  E  FG    A + G PPHGG+A G+
Sbjct: 474 IVLNGYEIGGGSLRIHKRSAQEAMFELLGMKKEDYERDFGFFLEALEYGFPPHGGLALGL 533

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           DR+VM+L    N+REV  FP +    D ++ SPS V+ +QL EL L +
Sbjct: 534 DRLVMILAEEGNIREVIAFPKNGQGADAMLESPSLVADQQLAELRLAL 581


>gi|320194418|gb|EFW69049.1| aspartyl-tRNA synthetase [Escherichia coli WV_060327]
          Length = 577

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/580 (37%), Positives = 327/580 (56%), Gaps = 9/580 (1%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75
           +G  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G
Sbjct: 1   MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR
Sbjct: 61  TVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRR 118

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALP
Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME 
Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++R ++ E    +     F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+
Sbjct: 238 LVRHLWLEVKGVDL--GYFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFA 295

Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374
              + +P   V A+   GG    R   D    + +  G  GLAYI       G      P
Sbjct: 296 GPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSP 354

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
           VAK LN    EAI  R   QDGD  FF A +           R  + ++LG+ + + +  
Sbjct: 355 VAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAP 414

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G
Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGG 473

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  
Sbjct: 474 SVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 573


>gi|110636537|ref|YP_676744.1| aspartyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|122967031|sp|Q11YW2|SYD_CYTH3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110279218|gb|ABG57404.1| aspartyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 616

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 225/618 (36%), Positives = 345/618 (55%), Gaps = 25/618 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+ +CG+L +SDV   V L GWV RVR  GG+I++D+RD YG+TQ++     +  E+ ++
Sbjct: 3   RSQTCGELRISDVNKEVTLCGWVARVRDKGGMIWVDLRDRYGMTQLILEEGKSSAELLET 62

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            R    E+V+   G V+ R A+  N  + TG IE+    + IL+ ++  P  +  E +  
Sbjct: 63  SRKLGREFVIRATGNVIERVAK--NPKMPTGDIEVKITALTILNESKTPPFLIEDETDGG 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R KYR+LDLRRD + KN+  R ++    R  + A NF+E  TP+L  S+PEGARDF+
Sbjct: 121 DETRMKYRYLDLRRDAVRKNLELRHKVSRETRTYLDANNFLEVETPVLIKSTPEGARDFV 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM +GFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 181 VPSRMNPGQFYALPQSPQTFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DILN  E ++R +F+     +       R+ + DA++ YG+DKPD+R  +    
Sbjct: 240 SFVEQEDILNMFEGLVRHLFKTVKEFDL--PEVPRMLFADAMKYYGSDKPDIRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQ--GQPGLAY 358
           +T+      F+VF +         V  I A+G     R   D + E+ +    G  G+ +
Sbjct: 298 LTDIVQSQGFQVFDE------ANLVVGINAEGCAEYTRKEIDALTEFVKRPQVGAKGMVW 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           + +  D +   +    V K  +  + + I  R + + GD    ++G+  K      D R 
Sbjct: 352 VRYAADGTLKSS----VDKFYSADDLKKIAERFNAKPGDLMLILSGNGNKVRGQLNDLRL 407

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLS 476
            I   LG+   + F   W++DFP  E+ EEE++    H+PFT P+       L  + L S
Sbjct: 408 EIGSRLGLRPKDKFAALWVIDFPLLEFGEEEQRWFAMHHPFTSPKDIDAFMKLPFDQLGS 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + A  YDLV NG E+  G IR +   V  + F  +G ++E  + +FG L  AF+ G PPH
Sbjct: 468 VNANAYDLVINGVEVGGGSIRIYDRTVQNKMFEVLGFTEEEAKAQFGFLLEAFEYGAPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+A G DR+  +  G  ++R+   FP + +  D+++ SPS +  +QL+EL + +    K
Sbjct: 528 AGLAFGFDRLCSIFGGVDSIRDFIAFPKNNSGRDVMIDSPSVIDDKQLKELSIDVKVADK 587

Query: 597 KILKISVTTILRNVYGLK 614
              +I +  I+   + +K
Sbjct: 588 G--RIGIPNIIEETFNVK 603


>gi|290579838|ref|YP_003484230.1| putative aspartyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996737|dbj|BAH87338.1| putative aspartyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 583

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/588 (37%), Positives = 327/588 (55%), Gaps = 17/588 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  V   GWV  +R HG + F+++RD  G+ QV  +   A F+    +  E
Sbjct: 6   IGNYGLEQVGQKVTAKGWVANIRNHGKLAFIELRDREGLLQVFVDSAVADFDKLHDLHKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            +L + G +++R    +N +I +GQ+EL A+ IEI++ ++ LP  +       E IR KY
Sbjct: 66  SILAVTGEIVARDERFVNPHIKSGQVELRAETIEIIASSKLLPFELDNHAHAGEDIRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++  ++R  +   +FI+  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTANLKLRHQVTKTIRDYLNQADFIDVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+EMSFV ++D
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLEMSFVSEED 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           + N +E +L+ V +  S G  ++  F  I Y  A+RR+G+DKPD R  + + ++TE    
Sbjct: 245 VRNLVEGMLKAVVKA-SKGIELTEAFPIISYAQAMRRFGSDKPDTRFAMELKDLTELSRG 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR-MNEWARSQGQPGLAYIFWRLDESG 367
           +      K L    G  V  I AK     +AF +R M    +     G+A       E G
Sbjct: 304 NTSLFLQKGLKKENGV-VMGICAKNAA--KAFTNRQMATLKQLVMDFGVAGFATATIEKG 360

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
            V   G +       NTE + +  + +DGD  FF+ G   +        R  +A++L +I
Sbjct: 361 QVT--GSLKSTFKDHNTELLEL-FEAEDGDMIFFVTGSLKRVQEALGGLRVRLAKDLELI 417

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL----SIKAFQYD 483
           + +   F W++D+P  EWNE+  +    H+PFT  QG  E   G+D       + +  YD
Sbjct: 418 DNDKLNFLWVVDWPLLEWNEDLNRYQAMHHPFT--QGAFED--GSDWKENPEKMMSRAYD 473

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+EI  G +R H        F  +G+ KE  E  FG    A + G PPHGG+A G+
Sbjct: 474 IVLNGYEIGGGSLRIHERSAQEAMFELLGMKKEDYERDFGFFLEALEYGFPPHGGLALGL 533

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           DR+VM+L   +N+REV  FP +    D ++ SPS V+ +QL +L L +
Sbjct: 534 DRLVMILAEEENIREVIAFPKNGQGADAMLESPSLVAEQQLADLRLAL 581


>gi|301155721|emb|CBW15189.1| aspartyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 588

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 216/591 (36%), Positives = 335/591 (56%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT+ CG L  + +G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTYYCGALNRNHIGQEVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQEALTAAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    +N N+ TG++E+ A+++ I + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPDNQVNKNMATGEVEVLAKELRIYNASDALPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G+++     +     F ++ + +A+ R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAPEVREIMERMVHGLWQNIIGVDL--GKFPQMTWQEAMTRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGTEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    +A+  R+ +Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVKVQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+   + ++  W++DFP +E  +EE  +   H+PFT P+         D  S  A  Y
Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F  +GI+++    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGINEQEQREKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + + +
Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALAELSIAVTK 586


>gi|113461366|ref|YP_719435.1| aspartyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123327310|sp|Q0I3S3|SYD_HAES1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|112823409|gb|ABI25498.1| aspartyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 585

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 219/594 (36%), Positives = 338/594 (56%), Gaps = 17/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S +G  V LSGWVH+ R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 2   RSHYCGALNRSHIGQQVILSGWVHKRRDLGGLIFIDMRDREGIVQVCFDPKYQEALTEAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + I+G V++R    IN N+ TG++E+ A+ + + +V++ LPL     +   E 
Sbjct: 62  ALRNEFCIKIEGEVIARPDNQINKNMATGEVEVVAKALSVYNVSDVLPLDF--NQNNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +++  R +I   +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMAQHLKTRAKITAFVRRYMDENGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS---NNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +   ++   ME ++ G++      NT+      F  + + +A+ R+G+DKPDLRNP+ + 
Sbjct: 239 MTAPEVREIMEKMVHGLWL-----NTIGVDLGKFPTMTWQEAMERFGSDKPDLRNPLEIV 293

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V +     +F VFS   + + G         G    R   D   ++    G  GLA++ 
Sbjct: 294 DVADIVKDIDFNVFSDPANSSNGRVAVIRVPNGINITRKQIDEYTQFVGIYGAKGLAWVK 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
                +G      P+AK L     +AI  R   Q GD  FF   D  +  + A  A R  
Sbjct: 354 INDINAGLEGVQSPIAKFLTTEKIKAIFDRTSAQSGDILFF-GADKWQTATDAMGALRLK 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
           + ++LG+ + + ++  W++DFP +E  +EE  +   H+PFT P+    E L+ N   ++ 
Sbjct: 413 LGRDLGLTHLDEWKPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFTPEQLEANPTSAV- 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R    ++    F  +GI ++    +FG L  A + G PPH G
Sbjct: 471 ANAYDMVINGYEVGGGSVRIFDPKMQQTVFHILGIDEDQQREKFGFLLDALKFGTPPHAG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +A G+DR+ MLL G  N+R+V  FP +     L+  +PS  + + L EL ++ +
Sbjct: 531 LAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTDAPSLANEKALEELAIKTI 584


>gi|229844589|ref|ZP_04464729.1| aspartyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229812838|gb|EEP48527.1| aspartyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 588

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 216/592 (36%), Positives = 333/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQEALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ + + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRVYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++            F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHGLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVE 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF    + +P   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVDFKVFQAPAN-DPNGRVAVIRVPNGNEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    +++  R++ Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKSLAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+   + ++  W++DFP +E  ++E  +   H+PFT P+         D  S  A  Y
Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDDEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL +++ ++
Sbjct: 536 LDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAIQVTKS 587


>gi|145299764|ref|YP_001142605.1| aspartyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166225315|sp|A4SPN5|SYD_AERS4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|142852536|gb|ABO90857.1| aspartyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 588

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 228/591 (38%), Positives = 342/591 (57%), Gaps = 18/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +  +  G  + L GWVHR R  GG+IF+D+RD  GI QV  +PD    F +A 
Sbjct: 2   RSIYCGQVNEAHAGQTITLCGWVHRRRDLGGLIFIDMRDREGIVQVFFDPDKPDAFALAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R E+ + + G+V +R     N+++ TG IE+ A ++ I++ AE  PLP+   +   E 
Sbjct: 62  ELRGEFCIQVSGVVRTRPDSQRNSDMATGAIEVFAHELTIINRAE--PLPLDFNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLRR  + K +  R +    +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKFRYLDLRRPEMAKYLKTRAKASAFVRRFMDEHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R +++     +    +F  + +D+A+RR+G+DKPDLR P+ + +V 
Sbjct: 239 MTAPQVRELMEEMIRNLWQHVLAVDL--GDFPVMTFDEAMRRFGSDKPDLRLPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D   ++    G  GLA++  +
Sbjct: 297 DLLTAVEFAVFAGPAN-DPKGRVAALKVPGGAELSRKQIDEYTKFVGIYGAKGLAWM--K 353

Query: 363 LDESGN-VAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
           ++E+ N + G+  PVAK L+      I  R    DGD  FF A D  K  + A  A R  
Sbjct: 354 VNEAANGIEGVQSPVAKFLSDEIVREILARTGAADGDIIFFGA-DSKKVVADAIGALRLK 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
           + ++LG++  N ++  W++DFP +E  + E  +   H+PFT P   G   LK N  LS  
Sbjct: 413 VGRDLGLME-NSWKPLWVIDFPMFE-EDSEGGLAAMHHPFTAPSNLGPSELKANP-LSAY 469

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R H SE+    F  +GI+      +FG L  A + G PPH G
Sbjct: 470 ANAYDMVINGYEVGGGSVRIHNSEMQATVFDILGITPAEQRLKFGFLLDALKYGTPPHAG 529

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           +A G+DR+ MLL G  N+R+V  FP +     L+  +PS  +  Q+ EL +
Sbjct: 530 LAFGLDRLSMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANQAQMSELAI 580


>gi|320334429|ref|YP_004171140.1| aspartyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755718|gb|ADV67475.1| aspartyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 584

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 231/590 (39%), Positives = 321/590 (54%), Gaps = 19/590 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H CGDL     G  V L+GWV+RVR   G  F+ +RD  GI QV    D+A +E A  
Sbjct: 3   RSHYCGDLRPEHAGQTVNLAGWVNRVRDFPGQYFVILRDRTGIVQVTVEADNAAYETAGE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPES 123
           +R E+V+ + G+V +R          TG +E+    + IL+ A      V G      E 
Sbjct: 63  LRGEYVVEVTGVVRARGEAQRTDAYATGGVEVIPTTLRILNRATTPAFQVDGSPVTVGED 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR KYR+LDLRR  +   +  R+R+   +   + +E F+   TP+LT S+PEGARDFLVP
Sbjct: 123 IRLKYRYLDLRRREMQDVLRLRSRVQAEVTRFLDSEGFVNVETPMLTRSTPEGARDFLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+N G FYALPQ+PQ +KQLLM +G DRY+Q A CFRDED R+DR P +F QLDMEMSF
Sbjct: 183 SRLNPGEFYALPQSPQLFKQLLMIAGLDRYYQFARCFRDEDLRADRQP-DFTQLDMEMSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VEQDD+L+  E +LR VF E   G  + N F RI Y +A+ RYG+DKPDLR      +VT
Sbjct: 242 VEQDDVLDLNERLLRHVFREVL-GEDLPNPFPRISYFEAMDRYGSDKPDLRFGQAFTDVT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
             F    F+ F+   +V    +V   P       R   D +   A+  G  GLA+    L
Sbjct: 301 GLFQGGAFKAFADAQTV----KVLVAPEL----TRKQIDELERVAKQNGARGLAW----L 348

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G+ A  G ++K +  V+ + I     ++ G +  F AGD     +     RN +   
Sbjct: 349 KRDGD-AFTGGISKFVGEVSAQLIDA-TGVEQGGTLLFAAGDWRAAVTALGAVRNALRDL 406

Query: 424 LGI-INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS-IKAFQ 481
             +  +   F   W+ DFP  + + E  +  + H+PFT P     +L G      I+A  
Sbjct: 407 FDLAAHGPRFHIGWVTDFPQLDQDPETGEWTYMHHPFTAPHPDDVALFGTPRQGEIRAQA 466

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NGFE+  G +R H   V  Q F  +G ++     +FG    A   G PPHGGIA 
Sbjct: 467 YDLVLNGFEVGGGSVRIHDPAVQTQMFGAIGFTEVQAREKFGFFMDALASGTPPHGGIAW 526

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR++ML+ GA N+REV  FP +    DL+  +P+ V   QL ++G+++
Sbjct: 527 GFDRLIMLMSGASNIREVIAFPKNNRGADLMADAPAPVDAAQLADVGVQV 576


>gi|323174759|gb|EFZ60375.1| aspartyl-tRNA synthetase [Escherichia coli LT-68]
 gi|332090043|gb|EGI95143.1| aspartyl-tRNA synthetase [Shigella boydii 5216-82]
 gi|332096621|gb|EGJ01615.1| aspartyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 573

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 218/574 (37%), Positives = 325/574 (56%), Gaps = 9/574 (1%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRS 81
           L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G V +R 
Sbjct: 3   LCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARD 62

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            + IN ++ TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR  + + 
Sbjct: 63  EKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQR 120

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +
Sbjct: 121 LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLF 180

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R ++
Sbjct: 181 KQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLW 239

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
            E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + +
Sbjct: 240 LEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-D 296

Query: 322 PGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
           P   V A+   GG    R   D    + +  G  GLAYI       G      PVAK LN
Sbjct: 297 PKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLN 356

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
               EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W++DF
Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDF 416

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H 
Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHN 475

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V 
Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 569


>gi|327252995|gb|EGE64649.1| aspartyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 573

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 218/574 (37%), Positives = 325/574 (56%), Gaps = 9/574 (1%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRS 81
           L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G V +R 
Sbjct: 3   LCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARD 62

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            + IN ++ TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR  + + 
Sbjct: 63  EKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQR 120

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +
Sbjct: 121 LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLF 180

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R ++
Sbjct: 181 KQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLW 239

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
            E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + +
Sbjct: 240 LEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-D 296

Query: 322 PGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
           P   V A+   GG    R   D    + +  G  GLAYI       G      PVAK LN
Sbjct: 297 PKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLN 356

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
               EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W++DF
Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDF 416

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H 
Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHN 475

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V 
Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALSELSIQVVKK 569


>gi|283769648|ref|ZP_06342544.1| aspartate--tRNA ligase [Bulleidia extructa W1219]
 gi|283103916|gb|EFC05302.1| aspartate--tRNA ligase [Bulleidia extructa W1219]
          Length = 582

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 213/589 (36%), Positives = 331/589 (56%), Gaps = 13/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R    G L   D+G  V+L GWV+  R  G +IF+D+RD  G+ Q+V   +       K 
Sbjct: 3   RNRENGSLRKEDIGQLVQLVGWVNTRRNFGSMIFVDLRDRSGLVQLVIQEED--IPEVKE 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+VL ++G V  R  +  N  + TG IE+   K+ +L+ ++  P P+  + E  E  
Sbjct: 61  IRSEYVLQVEGKVALR--KDPNPKLETGDIEVLVSKMVVLNRSKTTPFPIKDDSESLEET 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR  L KN+  R ++ ++ R  +  + F+E  TP L  S+PEGARD+LVPS
Sbjct: 119 RLQYRYLDLRRPVLQKNLWLRAKVKSAARRSLEEQGFLEIDTPTLARSTPEGARDYLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G F+ALPQ+PQ YKQL M +G D+Y+QIA C+RDED R+DR P EF Q+D+EMSF 
Sbjct: 179 RIYPGKFWALPQSPQIYKQLCMIAGLDKYYQIARCYRDEDLRADRQP-EFNQIDIEMSFA 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++DI   +E +++ +++E +    +   F RI Y D++ RYG+DKPDLR    + N+ +
Sbjct: 238 DEEDIFTVVEKLMKAIWKE-TKEIELKTPFERIPYLDSLDRYGSDKPDLRFGNEIQNMKK 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYIFWRL 363
            F  SEF  F + L                  +R   D++ ++ +   G   LAY+    
Sbjct: 297 IFEKSEFVGFQEGLKDTGTIGALYFENAANQYSRKALDQLQDFVKHGFGVQALAYL---- 352

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            +  N +  G + K ++    + +  +L +Q+      I+G   +  S     R  +A+E
Sbjct: 353 -KKENGSYTGSIRKVMSEEELKHLDEKLQVQNNGLVLLISGIKNRTLSALGALRVRLAKE 411

Query: 424 LGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           L +I     + F W+ DFP +E++EEEK+    H+PFT  +        +D   + A  Y
Sbjct: 412 LNLIPEGENYHFAWVTDFPMFEYSEEEKRWVATHHPFTAIREKDIPYLVSDPQRVLARAY 471

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+ SG IR H  EV  + F ++G++ E  + +FG    AFQ G PPHGG+  G
Sbjct: 472 DLVLNGYELLSGSIRIHSQEVQEKVFESIGLTFEQAKEKFGFFLEAFQYGAPPHGGVGIG 531

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           ++R++M L    N+R+V  FP + +  DL+  SP+ V  EQL  +G+ I
Sbjct: 532 LERLIMCLAHTDNIRDVVAFPTTNSSMDLMSQSPNKVETEQLNVVGIEI 580


>gi|293390528|ref|ZP_06634862.1| aspartyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951062|gb|EFE01181.1| aspartyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 592

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 214/593 (36%), Positives = 336/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  +++G  + LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RSHYCGALNRTNIGQEITLSGWVHRRRDLGGLIFIDMRDREGIVQVCFDPKYQKALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+ ++I + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIQGEVIARPDNQINKNMATGEVEVLAKVLKIYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +++  R +I   +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQHLKTRAKITGFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G+++     +     F  + + +A+RR+G+DKPDLRN + M +V 
Sbjct: 240 LTAPEVREIMERMVHGLWQHILGVDL--GKFPVMTWQEAMRRFGSDKPDLRNLLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + +F++F    +   G  +     +G    R   D   ++    G  GLA++    
Sbjct: 298 DIVKNVDFKIFQGPANDPNGRVIVIRVPRGNEITRKQIDEYTQFVGIYGAKGLAWLKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R+  Q GD  FF A             R  + ++
Sbjct: 358 VNAGLEGVQSPIAKFLNEDVLKALFERVGAQTGDILFFGADKWQTATDSMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E  ++E  +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFE-RDDEGCLAAMHHPFTSPKDFTPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL +++V++ K
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSEANPQALSELSIQVVKSNK 589


>gi|330445529|ref|ZP_08309181.1| aspartyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489720|dbj|GAA03678.1| aspartyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 596

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 222/590 (37%), Positives = 334/590 (56%), Gaps = 11/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD +  F +A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVIDPDMTEIFTLAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V  R     N ++ TG++EL A  +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRNEFCIRLTGEVRERPESQCNKDMATGEVELYATGLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNAFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G+FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGNFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++    E ++  +++E  N +     F  + +++A RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEEVRAVTEKMITEMWKEILNVDL--GTFPIMSFEEAARRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  V  I   GG   +R   D   ++    G  GLA++   
Sbjct: 297 DIVKDVDFKVFSGPANDEKG-RVAVIRVPGGAELSRKQIDEYTKFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN      +  R   + GD   F A             R  + +
Sbjct: 356 DRAAGFEGVQSPVAKFLNEEVVANLLERTQAESGDIILFGADSKRVVTEAMGALRLKLGE 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +LG+ + + ++  W++DFP +E N E+  +   H+PFT P     E L  N   ++ +  
Sbjct: 416 DLGLTDKSAWKPLWVVDFPMFEEN-EDGSLSAMHHPFTSPLNLTPEELAANPAAAL-SNA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H SE+    F  +GI  +    +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHNSEMQSTVFDILGIDADEQRLKFGFLLDALKFGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VMLL G  N+R+V  FP +     LL  +PS  +   L EL + +
Sbjct: 534 GLDRLVMLLCGTDNIRDVIAFPKTTAAACLLTDAPSLANPAALEELSIAV 583


>gi|320534371|ref|ZP_08034857.1| aspartyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320133413|gb|EFW25875.1| aspartyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 566

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 228/583 (39%), Positives = 324/583 (55%), Gaps = 34/583 (5%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           + F+D+RD  GI QVV        EIA  +R+E+VL + G V +R     N N+ TG+IE
Sbjct: 1   MAFIDLRDASGIAQVVIRE-----EIAHDLRAEYVLAVTGEVSARPEGNANPNLPTGEIE 55

Query: 96  LSAQKIEILSVAEELPLPVFGERE----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
           +    +EIL+ +  LP  V    E      E  R +YR+LDLRR  +   I  R ++  +
Sbjct: 56  VVVSDVEILNASAPLPFQVSDHAEDAGQVGEEARLRYRYLDLRRSAMQHTIRLRAKVSQA 115

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
            R  + + +F+E  TP LT S+PEGARDFLVP+R+  GS+YALPQ+PQ +KQLLM +G +
Sbjct: 116 ARRVLDSHDFVEIETPTLTRSTPEGARDFLVPARLAPGSWYALPQSPQLFKQLLMVAGME 175

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           RY+QIA C+RDED R+DR P EF QLD+EMSFVEQDD++   E+VLR V+        + 
Sbjct: 176 RYYQIARCYRDEDFRADRQP-EFTQLDVEMSFVEQDDVIAVAEDVLREVWALID--YDLP 232

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
               R+ Y DA+ +YG+DKPDLR    + ++T++F  + FRVF      NP      +P 
Sbjct: 233 TPIARMTYRDAMEKYGSDKPDLRFGCELVDLTDYFKDTTFRVFQ-----NPYVGAVVMPG 287

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL 391
                 R F D   EWA+ +G  GLAY+   + + G +   GPVAK++       +    
Sbjct: 288 GASQSRRTF-DAWQEWAKQRGAKGLAYV--TVADDGTLG--GPVAKNITDAERAGLAQAA 342

Query: 392 DMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK 451
             + GD  FF AG      +    AR  I +  G+IN + + F W++D P ++ + E K 
Sbjct: 343 GAEPGDCIFFAAGPVDSSRALLGAARLEIGKRCGLINDDEWSFVWVVDAPLFKPSVEAKA 402

Query: 452 I-DFA---------HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
             D A         H+ FT P+         D     A+ YD+VCNG EI  G IR H S
Sbjct: 403 DGDVALGKSAWTAVHHAFTSPKPECLETFDTDPGGALAYAYDIVCNGNEIGGGSIRIHRS 462

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           +V  + F+ +GI ++  + +FG L  AF+ G PPHGGIA G DRIV LL  A ++R+V  
Sbjct: 463 DVQERVFNVMGIGEQEAQEKFGFLLDAFKFGAPPHGGIAFGWDRIVSLLTRADSIRDVIA 522

Query: 562 FPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISVT 604
           FP S    D L  +P+ ++ EQ +E G  +  +P K  K + T
Sbjct: 523 FPKSGGGFDPLTEAPAPITPEQRKEAG--VDADPDKADKPAGT 563


>gi|301029316|ref|ZP_07192413.1| aspartyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|299877742|gb|EFI85953.1| aspartyl-tRNA synthetase [Escherichia coli MS 196-1]
          Length = 577

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 219/580 (37%), Positives = 327/580 (56%), Gaps = 9/580 (1%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75
           +G  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G
Sbjct: 1   MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR
Sbjct: 61  TVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRR 118

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALP
Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME 
Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+
Sbjct: 238 LVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFA 295

Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374
              + +P   V A+   GG    R   D    + +  G  GLAYI       G      P
Sbjct: 296 GPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSP 354

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
           VAK LN    E I  R   QDGD  FF A +           R  + ++LG+ + + +  
Sbjct: 355 VAKFLNAEIIEDILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAP 414

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G
Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGG 473

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  
Sbjct: 474 SVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 573


>gi|319896649|ref|YP_004134842.1| aspartyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432151|emb|CBY80502.1| aspartyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 588

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 221/592 (37%), Positives = 336/592 (56%), Gaps = 11/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++  ++            F  + + +A+ R+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHDLW--LDTIGVDLGKFPVMTWQEAMCRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVEFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+AK LN    +A+  R++ Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +LG+   + ++  W++DFP +E  +EE  +   H+PFT P+    E L+ N   ++ A  
Sbjct: 417 DLGLTRLDEWKPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFTPEQLEVNPTDAV-ANA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A 
Sbjct: 475 YDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G+DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+
Sbjct: 535 GLDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVK 586


>gi|320182596|gb|EFW57485.1| aspartyl-tRNA synthetase [Shigella boydii ATCC 9905]
          Length = 573

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 218/574 (37%), Positives = 325/574 (56%), Gaps = 9/574 (1%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRS 81
           L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G V +R 
Sbjct: 3   LCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARD 62

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            + IN ++ TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR  + + 
Sbjct: 63  EKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQR 120

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +
Sbjct: 121 LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLF 180

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R ++
Sbjct: 181 KQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLW 239

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
            E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + +
Sbjct: 240 LEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-D 296

Query: 322 PGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
           P   V A+   GG    R   D    + +  G  GLAYI       G      PVAK LN
Sbjct: 297 PKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINNPVAKFLN 356

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
               EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W++DF
Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDF 416

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H 
Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHN 475

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V 
Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 569


>gi|86739405|ref|YP_479805.1| aspartyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86566267|gb|ABD10076.1| aspartyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 620

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 228/591 (38%), Positives = 318/591 (53%), Gaps = 23/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH CGDL    V   V + GWV   R HG  + F+D+RDH GI Q V +        + 
Sbjct: 30  RTHMCGDLRSDHVDQTVTVCGWVAHRRQHGQSLTFVDLRDHSGIIQAVVDG-------SV 82

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122
            VR+E+VL I G V  R   T N  + TG++EL   ++++LSVA   P P+    +   E
Sbjct: 83  DVRTEYVLRITGTVAVRPEGTANPALATGEVELRDCEVQVLSVATPPPFPLDDRADSVDE 142

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + R  YR+LDLRRD + +N+  R+ ++ +MR  +   +F+E  TP+L  S+PEGAR+F+V
Sbjct: 143 ATRLAYRYLDLRRDRMQRNLRIRSAVLAAMRSALAPLDFVEVETPLLMPSTPEGAREFIV 202

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   GSFYALPQ+PQ +KQLLM  G DRYFQ A C RDED R+DR   EF QLD+EMS
Sbjct: 203 PSRQFPGSFYALPQSPQLFKQLLMVGGTDRYFQFARCLRDEDLRADRQ-YEFTQLDLEMS 261

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+QDD+L+     +       + G        R+ + +A+ R+G DKPDLR  + +  +
Sbjct: 262 FVDQDDVLDVTSAAVLAAARAVTGGPV--PPIERMSWHEAMNRFGVDKPDLRFGMELVEL 319

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T  F  S F+ F+   +V  G  V   P      NR   D +   A+  G  GL ++  R
Sbjct: 320 TAVFAGSGFKAFAGAEAVK-GIRV---PGGSASHNRRKLDDLTARAKGLGAKGLVWM--R 373

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           +   G +    PVAK L+      I        GD    +A +    C      RN + +
Sbjct: 374 VGPGGELE--SPVAKFLSAEELAGIVAATAAVAGDLLLLVADEWATTCEVLGQLRNDLGR 431

Query: 423 ELGIINCNCFEFCWIMDFP-FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
                      F W++DFP F   +    +    H+PFT P          D L++++  
Sbjct: 432 PPA--GEGPLRFVWVVDFPLFVGVDPGTGRPKPGHHPFTRPHPDDVDKLETDPLAVRSRA 489

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+ SG IR H S +  + F  +GIS    + RFG     F  G PPHGG A 
Sbjct: 490 YDLVLNGWELGSGSIRIHESGLQQRIFGILGISPAEAKARFGFFLTPFGYGAPPHGGFAV 549

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR+V +L G +N+REV  FP +Q+  D L G+P+ V+  QLRELG+R+V
Sbjct: 550 GIDRLVAILAGEENIREVIAFPKTQSGLDPLTGAPTPVTDRQLRELGVRVV 600


>gi|333004719|gb|EGK24242.1| aspartyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333018440|gb|EGK37738.1| aspartyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 573

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 218/574 (37%), Positives = 325/574 (56%), Gaps = 9/574 (1%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRS 81
           L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G V +R 
Sbjct: 3   LCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARD 62

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            + IN ++ TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR  + + 
Sbjct: 63  EKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQR 120

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +
Sbjct: 121 LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLF 180

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R ++
Sbjct: 181 KQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLW 239

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
            E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + +
Sbjct: 240 LEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-D 296

Query: 322 PGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
           P   V A+   GG    R   D    + +  G  GLAYI       G      PVAK LN
Sbjct: 297 PKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLN 356

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
               EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W++DF
Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALRLKVGKDLGLTDESKWAPLWVIDF 416

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H 
Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHN 475

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V 
Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 569


>gi|90580113|ref|ZP_01235921.1| aspartyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438998|gb|EAS64181.1| aspartyl-tRNA synthetase [Vibrio angustum S14]
          Length = 596

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 221/590 (37%), Positives = 335/590 (56%), Gaps = 11/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD +  F +A 
Sbjct: 2   RTHYCGHLNKSLAGQTVDLCGWVNRRRDLGGLIFIDMRDREGVVQVVIDPDMTEIFTLAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V  R     N ++ TG++E+ A  +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRNEFCIRLTGEVRERPESQCNKDMATGEVEIYATGLEIINRSDALPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNAFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G+FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGNFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++    E ++  +++E  N +     F  + +++A RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEEVRAVTEKMITEMWKELLNVDL--GTFPIMSFEEADRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  V  I   GG   +R   D   ++    G  GLA++   
Sbjct: 297 DIVKDVDFKVFSGPANDEKG-RVAVIRVPGGAELSRKQIDEYTKFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN      +  R   + GD   F A             R  + +
Sbjct: 356 DRAAGFEGVQSPVAKFLNEEVVANLLERTQAESGDIILFGADSKRVVTEAMGALRLKLGE 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +LG+ + + ++  W++DFP +E N E+  +   H+PFT P     E L  N   ++ +  
Sbjct: 416 DLGLTDKSAWKPLWVVDFPMFEEN-EDGSLSAMHHPFTSPLNLTPEELAANPAAAL-SNA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H S++    F  +GIS +    +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHNSDMQSTVFDILGISADEQRLKFGFLLDALKFGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VMLL G  N+R+V  FP +     LL  +PS  +   L EL + +
Sbjct: 534 GLDRLVMLLCGTDNIRDVIAFPKTTAAACLLTDAPSLANPAALEELSIAV 583


>gi|313205695|ref|YP_004044872.1| aspartyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445011|gb|ADQ81366.1| aspartyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315022587|gb|EFT35613.1| aspartyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325336862|gb|ADZ13136.1| Aspartyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 582

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 211/593 (35%), Positives = 338/593 (56%), Gaps = 19/593 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61
           +RTH+ G+L + ++   V LSGWV  +R  G ++++D+RD YGITQ+V + +    E+  
Sbjct: 2   FRTHTNGELSLKNLNENVTLSGWVQTIRDKGFVVWIDLRDRYGITQLVLDEERTTKELLE 61

Query: 62  -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AK +  E+V+   G V+ RS +  N  I TG+IE+  +++ IL+ ++  P  +  E + 
Sbjct: 62  KAKKLGREFVIQAKGKVIERSNK--NPKIPTGEIEILVEELNILNESQLPPFTIEDETDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR  +   +V R+++   +R  +  + FIE  TP+L  S+PEGARDF
Sbjct: 120 GEELRMKYRYLDIRRTPVKNKLVFRSQMAQEVRNYLSNQGFIEVETPVLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DI+N  E +   + ++ +  +     F R+ + +A+++YG DKPD+R  ++  
Sbjct: 239 MAFVEQEDIMNVFEGMTTHLLKKVTGKDF--GTFPRMSFAEAMQKYGNDKPDIRFGMVFT 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
            + E     +F++F +         V  I  +G     R   D + +W + + Q G   +
Sbjct: 297 ELNEIVKGKDFKIFDE------AELVVGINVEGCANYTRKQIDELIDWVK-RPQIGATGM 349

Query: 360 FW-RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
            W +  E G +     V K     + + I  +   + GD    ++G      +  +  R 
Sbjct: 350 VWVKYQEDGTLT--SSVNKFYTEEDLKLIAGKFGAKAGDLMLIMSGTASTVRTQLSALRM 407

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +   LG+   + F   W++DFP  EW+EE ++    H+PFT P+     L  N     +
Sbjct: 408 ELGNRLGLRKPDEFAPLWVIDFPLLEWDEETQRYHAMHHPFTSPKKEDLHLLENQADKAR 467

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG EI  G IR +   +  + F+ +G ++E  E +FG L  AF+ G PPHGG
Sbjct: 468 ANAYDLVLNGNEIGGGSIRIYDRNLQSKMFNLLGFTEEEAEAQFGFLMNAFKYGAPPHGG 527

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G DR+V +L G + +R+   FP + +  D+++ +PS ++ EQL EL L++
Sbjct: 528 LAFGFDRLVAILDGNEVIRDYIAFPKNNSGRDVMIDAPSNIAEEQLEELHLKL 580


>gi|89075783|ref|ZP_01162171.1| aspartyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89048515|gb|EAR54090.1| aspartyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 596

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 221/590 (37%), Positives = 335/590 (56%), Gaps = 11/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD +  F +A 
Sbjct: 2   RTHYCGHLNKSLAGQTVDLCGWVNRRRDLGGLIFIDMRDREGVVQVVIDPDMTEIFTLAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V  R     N ++ TG++E+ A  +EI++ +E LPL  F ++   E 
Sbjct: 62  QLRNEFCIRLTGEVRERPESQCNKDMATGEVEVYATGLEIINRSEALPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNAFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G+FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGNFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++    E ++  +++E  N +     F  + +++A RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEEVRAVTEKMITEMWKELLNVDL--GTFPIMSFEEAARRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  V  I   GG   +R   D   ++    G  GLA++   
Sbjct: 297 DIVKDVDFKVFSGPANDEKG-RVAVIRVPGGAELSRKQIDEYTKFVGIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN      +  R   + GD   F A +           R  + +
Sbjct: 356 DRAAGFEGVQSPVAKFLNEEVVANLLERTQAESGDIILFGADNKRVVTEAMGALRLKLGE 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +L + + + ++  W++DFP +E N E+  +   H+PFT P     E L  N   ++ +  
Sbjct: 416 DLDLTDKSAWKPLWVVDFPMFEEN-EDGSLSAMHHPFTSPLNLTPEELAANPAAAL-SNA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H S++    F  +GIS +    +FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHNSDMQSTVFDILGISADEQRLKFGFLLDALKFGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VMLL G  N+R+V  FP +     LL  +PS  +   L EL + +
Sbjct: 534 GLDRLVMLLCGTDNIRDVIAFPKTTAAACLLTDAPSLANPAALEELSIAV 583


>gi|42560880|ref|NP_975331.1| aspartyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|62287569|sp|Q6MTR3|SYD_MYCMS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|42492377|emb|CAE76973.1| aspartate-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320537|gb|ADK69180.1| aspartate--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 574

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 211/591 (35%), Positives = 335/591 (56%), Gaps = 21/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L ++++   V L GWV ++R  G ++F+D++D YGITQ+V   D    ++  +
Sbjct: 3   RTHTCGELTINNIDQEVILQGWVKKIRKLGAMVFIDLKDRYGITQLVV--DQQHIDLINN 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           V++E+V+ I G V+ R  ++IN  ++TG IE+  +++ I++ +E  P  +  +    E  
Sbjct: 61  VKNEYVIEIKGNVVKR--KSINKELVTGDIEVIVKELFIINKSELTPFVLENDVNVNEDT 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  YR+LDLRR  +  N++ R +I + +R  +   NF+E  TP    S+PEGARDFLVPS
Sbjct: 119 RLTYRYLDLRRPVMQNNLIIRAKINHIIRNFLTDSNFLEVETPYFAKSTPEGARDFLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+N+  FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R DR P EF QLD+EMSF 
Sbjct: 179 RLNKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQP-EFTQLDLEMSFA 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             +D++   E++++ + +E  N   +    LR+ Y DAI  YG+DKPDLR  + +H + +
Sbjct: 238 TSEDVMQISESLIKKILKEVKNFE-IKEPLLRLSYKDAIDLYGSDKPDLRYDLKIHTLND 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++  +  +     NP   + AI        +   D +N+ A+      +A+I +   
Sbjct: 297 IFKNTNIKFLN-----NPDLFIRAICIDQLLSKKQLED-LNQQAKQFHFNSIAFIKF--- 347

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E+ N +  G +A  L     E +    D+++  +     G   +        R  +A+  
Sbjct: 348 ENNNWS--GSLASQLTENEKELLIKEFDIKNKATIVLNIGKYEQISQLMGAIRISLAKMF 405

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ--Y 482
            +   + F+  W++DFP +E++E+E +   AH+PFT P+   E L   D     A    Y
Sbjct: 406 NLETKDDFKLLWVVDFPLFEFSEQENRYVAAHHPFTSPKE--ECLTDFDTNKKDALTCAY 463

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NGFEI  G  R    E+  + F  V ++ + VE  FG    A++ G P H GIA G
Sbjct: 464 DLVMNGFEIGGGSQRITNPEIQQRMFDAVELTTQQVETNFGWFMNAYKYGAPYHAGIAWG 523

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DRI M++  + ++R+V  FP +    D++  +P  VS +QL EL ++IV+
Sbjct: 524 LDRISMIVTDSNSIRDVIAFPKNSLGIDMMSNAPDLVSEKQLEELNIKIVK 574


>gi|54308305|ref|YP_129325.1| aspartyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|62287565|sp|Q6LT53|SYD_PHOPR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|46912733|emb|CAG19523.1| Putative aspartyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 597

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 221/599 (36%), Positives = 339/599 (56%), Gaps = 11/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD    FE+A 
Sbjct: 2   RTQYCGHLNKSLEGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDVFELAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V  R    +N  + TG++E+ A  +EI++ ++ LPL     +   E 
Sbjct: 62  QLRNEFCIRLIGEVRVRPESQVNKKMATGEVEILATGLEIINRSDVLPLDF--NQNNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R K+R+LDLRR  +   I  R +  + +R R + EN F++  TP+LT ++PEGARD+LV
Sbjct: 120 QRLKFRYLDLRRPEMSDRIKLRAKASSFVR-RFLDENAFLDIETPVLTKATPEGARDYLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E S
Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  + +    E ++  +++E  N +     F  + +++A+RR+G+DKPDLRNP+ + +V
Sbjct: 238 FMSAEQVREITEKMITEMWKELLNVDL--GTFPIMQFEEALRRFGSDKPDLRNPLELVDV 295

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
            +     +F+VFS   +   G  V  I   GG   +R   D   ++    G  GLA++  
Sbjct: 296 ADILKDVDFKVFSGPANDEKG-RVAVIRVPGGASLSRKQIDEYTKFVGIYGAKGLAWMKV 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E+G      PVAK LN      +  R   + GD   F A             R  + 
Sbjct: 355 NDREAGFAGVQSPVAKFLNEDVVANLLDRTQAETGDIILFGADSKRVVTEALGALRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L + + + ++  W++DFP +E  + E  +   H+PFT P G        +  +  +  
Sbjct: 415 EDLELTDKSIWKPLWVIDFPMFE-EDGEGNLHAMHHPFTSPLGITAEELAVNPAAANSNA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H +++    F+ +GI +   +++FG L  A + G PPH G+A 
Sbjct: 474 YDMVINGYEVGGGSVRIHNADMQSAVFNILGIEEGEQQSKFGFLLEALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           G+DR+VMLL G  N+R+V  FP +     LL  +PS  + + L+EL + +    K+  K
Sbjct: 534 GLDRLVMLLCGTDNIRDVIAFPKTTAASCLLTNAPSLANPDSLKELSIAVAIAKKETAK 592


>gi|313650638|gb|EFS15040.1| aspartyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|333003477|gb|EGK23020.1| aspartyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333018637|gb|EGK37931.1| aspartyl-tRNA synthetase [Shigella flexneri K-304]
          Length = 577

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 219/580 (37%), Positives = 327/580 (56%), Gaps = 9/580 (1%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75
           +G  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G
Sbjct: 1   MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR
Sbjct: 61  TVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRR 118

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALP
Sbjct: 119 PEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALP 178

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME 
Sbjct: 179 QSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEA 237

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+
Sbjct: 238 LVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFA 295

Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374
              + +P   V A+   GG    R   D    + +  G  GLAYI       G      P
Sbjct: 296 GPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSP 354

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
           VAK LN    EAI  R   QDGD  FF A +              + ++LG+ + + +  
Sbjct: 355 VAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGKDLGLTDESKWAP 414

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G
Sbjct: 415 LWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGG 473

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  
Sbjct: 474 SVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTD 533

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           N+R+V  FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 534 NIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 573


>gi|170719031|ref|YP_001784189.1| aspartyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189082101|sp|B0USU0|SYD_HAES2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|168827160|gb|ACA32531.1| aspartyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 588

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 219/596 (36%), Positives = 339/596 (56%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S +G  V LSGWVH+ R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RSHYCGALNRSHIGQQVILSGWVHKRRDLGGLIFIDMRDREGIVQVCFDPKYQEALTEAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + I+G V++R    IN N+ TG++E+ A+ + + +V++ LPL  F +    E 
Sbjct: 63  ALRNEFCIKIEGEVIARPDNQINKNMATGEVEVVAKALSVYNVSDVLPLD-FNQNNTEEQ 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +++  R +I   +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 122 -RLKYRYLDLRRPEMAQHLKTRAKITAFVRRYMDENGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS---NNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +   ++   ME ++ G++      NT+      F  + + +A+ R+G+DKPDLRNP+ + 
Sbjct: 240 MTAPEVREIMEKMVHGLWL-----NTIGVDLGKFPTMTWQEAMERFGSDKPDLRNPLEIV 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V +     +F VFS   + + G         G    R   D   ++    G  GLA++ 
Sbjct: 295 DVADIVKDIDFNVFSDPANSSNGRVAVIRVPNGINITRKQIDEYTQFVGIYGAKGLAWVK 354

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNH 419
                +G      P+AK L     +AI  R   Q  D  FF   D  +  + A  A R  
Sbjct: 355 INDINAGLEGVQSPIAKFLTTEKIKAIFDRTSAQSDDILFF-GADKWQTATDAMGALRLK 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
           + ++LG+ + + ++  W++DFP +E  +EE  +   H+PFT P+    E L+ N   ++ 
Sbjct: 414 LGRDLGLTHLDEWKPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFTPEQLEANPTSAV- 471

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R    ++    F  +GI ++    +FG L  A + G PPH G
Sbjct: 472 ANAYDMVINGYEVGGGSVRIFDPKMQQTVFHILGIDEDQQREKFGFLLDALKFGTPPHAG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR+ MLL G  N+R+V  FP +     L+  +PS  + + L EL +++  +
Sbjct: 532 LAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTDAPSLANEKALEELAIKVTRS 587


>gi|256384356|gb|ACU78926.1| aspartate--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385188|gb|ACU79757.1| aspartate--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455509|gb|ADH21744.1| aspartate--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 574

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 208/589 (35%), Positives = 333/589 (56%), Gaps = 17/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L + ++   V L GWV ++R  G ++F+D++D YGITQ+V   ++   ++  +
Sbjct: 3   RTHTCGELTIDNIDQEVILQGWVKKIRKLGAMVFIDLKDRYGITQLVIEQEN--IDLINN 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           V++E+V+ I G V+ R  ++IN  ++TG IE+  +++ I++ +E  P  +  +    E  
Sbjct: 61  VKNEYVIEIKGNVVKR--KSINKELVTGDIEVIVKELFIINKSELTPFVLENDVNVNEDT 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  YR+LDLRR  +  N++ R +I + +R  +   NF+E  TP    S+PEGARDFLVPS
Sbjct: 119 RLTYRYLDLRRQVMQNNLIIRAKINHIIRNFLTDLNFLEVETPYFAKSTPEGARDFLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+N+  FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R DR P EF QLD+EMSF 
Sbjct: 179 RLNKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQP-EFTQLDLEMSFA 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             +D++   E++++ + +E  N   +    LR+ Y DAI  YG+DKPDLR  + +H + +
Sbjct: 238 TSEDVMQISESLIKKILKEVKNFE-IKEPLLRLSYKDAIDLYGSDKPDLRYDLKIHTLND 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++  +  +     NP   + AI        +   D +N+ A+      +A+I +   
Sbjct: 297 IFKNTNIKFLN-----NPDLFIRAICIDQLLSKKQLED-LNQQAKQFSFNSIAFIKF--- 347

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E  N +  G +A  L     E +    D+++  +     G   +        R  +A+  
Sbjct: 348 EDNNWS--GSLASQLTENEKELLIKEFDIKNKATIILNIGKYAEISQLMGAIRISLAKMF 405

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            +   + F+  W++DFP +E++E+E +   AH+PFT P+    +    +     A  YDL
Sbjct: 406 NLETKDDFKLLWVVDFPLFEFSEQENRYVAAHHPFTSPKEECLTDFDTNKKDALACAYDL 465

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NGFEI  G  R    E+  + F  V ++ + VE  FG    A++ G P H GIA G+D
Sbjct: 466 VMNGFEIGGGSQRITNPEIQQRMFDAVELTAKQVETNFGWFMNAYKYGAPYHAGIAWGLD 525

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           RI M+L  + ++R+V  FP +    D++  +P  VS +QL EL ++IV+
Sbjct: 526 RISMILTDSNSIRDVIAFPKNSLGIDMMSNAPDLVSEKQLEELNIKIVK 574


>gi|71278161|ref|YP_268840.1| aspartyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|97196634|sp|Q483C7|SYD_COLP3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71143901|gb|AAZ24374.1| aspartyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 601

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 217/601 (36%), Positives = 347/601 (57%), Gaps = 20/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CG++  S +G  + L GWV++ R  G +IFLD+RD  G+ QVV +PD     + A 
Sbjct: 2   RSLYCGEVNESHIGQEITLCGWVNKRRDLGAVIFLDLRDREGLVQVVYDPDLPEVIKKAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + I G V +R    +N  + TG IE+   ++ IL+  +  PLP+   +   E 
Sbjct: 62  TLRNEFCVQIKGKVRARPEGQVNKGMKTGGIEVLGLELTILN--KSAPLPLDSNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  + + +  R ++ +++R  + ++ F++  TPILTA++PEGARD+LVP
Sbjct: 120 LRLKYRYLDLRRVEMTERLRFRAKVTSAVRSSLESQGFLDIETPILTAATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG +RY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRTHKGQFFALPQSPQLFKQLLMMSGMERYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D ++   E ++R +F+E  + +     F R+ Y +A+ R+G+DKPDLRNP+ + +V 
Sbjct: 239 MSSDQVMEVTEKMIRELFQELLDVDL--GEFPRMPYSEAMTRFGSDKPDLRNPLELIDVD 296

Query: 304 EHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +   G   V  +P      +R   D + ++    G  G+ ++  +
Sbjct: 297 DILKDVEFKVFSGPANDENGRVAVICLPQGAAKFSRKGLDELTKFVGIYGAKGMPWL--K 354

Query: 363 LDE-----SGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           +++     S  V G+  P+ K L+     A+  R + + GD  FF A             
Sbjct: 355 VNDIDAALSTGVEGLQSPILKFLSSDEAIALLKRTNAKTGDIIFFGADQYNVVTESLGAL 414

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLL 475
           R  + +EL ++    ++  W++DFP +E  E +  +   H+PFT P     E L+ N + 
Sbjct: 415 RLKLGEELDLLQGE-WKPLWVVDFPMFE--EVDGHMHAIHHPFTAPTNLTAEQLEANPVG 471

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           ++ +  YD+V NG E+  G +R H  ++    F  +GIS E  E +FG L  A Q G PP
Sbjct: 472 AL-SDAYDMVLNGCELGGGSVRIHNQDMQAAVFRILGISDEEAEEKFGFLLEALQYGAPP 530

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           H G+A G+DR+VML+ GA ++R+V  FP +      L  +P   + EQLRELG+ ++E  
Sbjct: 531 HAGLAFGLDRLVMLMTGASSIRDVMAFPKTNTAACPLTNAPGKANPEQLRELGVAVLEVK 590

Query: 596 K 596
           K
Sbjct: 591 K 591


>gi|315126202|ref|YP_004068205.1| aspartate tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315014716|gb|ADT68054.1| aspartate tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 592

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 219/594 (36%), Positives = 336/594 (56%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CG L  + V   V L GW+++ R  GG+IF+D+RD  G+ QVV +P+     E A 
Sbjct: 2   RSIYCGQLNKTHVDQEVELCGWINKRRDLGGLIFVDLRDREGLVQVVFDPEVEGLMETAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R E+ + + G+V +R    +N ++ TG++E+    + I++ +E  P+P+   +   E 
Sbjct: 62  KLRQEFCVQLKGIVRARPDSQVNKDMATGEVEILGTGLTIINRSE--PMPLDFNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R KYR+LDLRR  +   I  R +  + +R R + EN F++  TP+LT ++PEGARD+LV
Sbjct: 120 RRLKYRYLDLRRLEMSDRIKLRAKASSFVR-RFLDENGFLDIETPVLTKATPEGARDYLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E S
Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDLETS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  D +    E ++R +++   N +    +F  + Y +A+  YG+DKPDLRNP+ + +V
Sbjct: 238 FMSSDQVRGMTEKMIREMWQSLLNVDL--GDFPIMPYSEAMSLYGSDKPDLRNPMKLIDV 295

Query: 303 TEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF+VFS   +   G   V  +P  G   +R   D   ++    G  GLA++  
Sbjct: 296 ADLVKDVEFKVFSGPANDEKGRVAVLTVPG-GASLSRKQLDDYTKFIGIYGAKGLAWMKV 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              ++G      P+AK LN      +  R + Q GD   F A             R  I 
Sbjct: 355 NDRDAGVEGVQSPIAKFLNEDVITQLLERTNAQTGDIILFGADKRNTVNEAMGALRLKIG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
            +L I N + +   W++DFP +E  ++E  +   H+PFT P+      L+ N   +I   
Sbjct: 415 IDLEITNLDSWAPLWVVDFPMFE-EDDEGTLHAVHHPFTAPKDISASELEANPAAAISD- 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +++   AF  +GI  +  +++FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNADMQEAAFRILGIEAQEQQDKFGFLLDALKYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+VMLL G  N+R+V  FP +     LL  +PS  + + L EL + +VE 
Sbjct: 533 FGLDRLVMLLCGTDNIRDVIAFPKTTQASCLLTDAPSKANSDSLTELAISVVEK 586


>gi|313665222|ref|YP_004047093.1| aspartate--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949402|gb|ADR23998.1| aspartate--tRNA ligase [Mycoplasma leachii PG50]
          Length = 575

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 210/591 (35%), Positives = 337/591 (57%), Gaps = 20/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L + +V   V L GWV ++R  G ++F+D++D YG+TQ+V   ++    +  +
Sbjct: 3   RTHTCGELTLQNVDQKVILQGWVKKIRKLGAMVFIDLKDRYGVTQLVIEQENIN--LINN 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +++E+V+ I G+V+ R  +++N  + TG IE+  + + +++ +E  P  +  +    E  
Sbjct: 61  LKNEYVIEISGIVVKR--KSVNKELSTGDIEVIVKDLLVINKSELTPFVLENDVNVNEDT 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  YR+LDLRR  +  N++ R +I + +R  +   NF+E  TP    S+PEGARDFLVPS
Sbjct: 119 RLTYRYLDLRRQIMQNNLITRAKINHIIRNYLTDLNFLEVETPYFAKSTPEGARDFLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+N+  FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R DR P EF QLD+EMSF 
Sbjct: 179 RLNKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQP-EFTQLDLEMSFA 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             +D++   E++++ + +E  N   +    LR+ Y DAI  YG+DKPDLR  + +H + +
Sbjct: 238 TSEDVMQISESLIKKILKEVKNFE-IKEPLLRLSYKDAIDLYGSDKPDLRYDLKIHTLND 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F +S+ ++F   L     Y + A+        +   + +N+ A+      +A+I     
Sbjct: 297 IFKNSDIKMF---LDSQNKY-IRAVCIDQLLTKKQL-EELNQQAKQFHFNSIAFI----- 346

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           +  N A  G +A  L  +  E +    D+++  +     G   +        R ++A+  
Sbjct: 347 KVENNAWSGSLASQLTEIQKEQLIKEFDIKNKATIILNIGKYEEISQLMGAIRINLAKMF 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF--QY 482
            +   + F+  W++DFP +E++E+E +   AH+PFT P+   ESL   D     A    Y
Sbjct: 407 NLETKDDFKLLWVVDFPLFEFSEQENRYVAAHHPFTSPKE--ESLADFDTNKKDALACAY 464

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NGFEI  G  R   SE+  + F  V +S++ VE  FG    A++ G P H GIA G
Sbjct: 465 DLVMNGFEIGGGSQRITNSEIQQRMFDAVELSQKQVEANFGWFMNAYKYGAPYHAGIAWG 524

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DRI M+L  + ++R+V  FP +    D++  +P  VS +QL EL ++ +E
Sbjct: 525 LDRISMILTDSNSIRDVIAFPKNSLGVDMMSNAPDLVSDKQLDELNIKTIE 575


>gi|320174355|gb|EFW49504.1| aspartyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 573

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 218/574 (37%), Positives = 325/574 (56%), Gaps = 9/574 (1%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRS 81
           L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G V +R 
Sbjct: 3   LCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARD 62

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            + IN ++ TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR  + + 
Sbjct: 63  EKNINRDMGTGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQR 120

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +
Sbjct: 121 LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLF 180

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R ++
Sbjct: 181 KQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLW 239

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
            E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + +
Sbjct: 240 LEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-D 296

Query: 322 PGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
           P   V A+   GG    R   D    + +  G  GLAYI       G      PVAK LN
Sbjct: 297 PKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLN 356

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
               EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W++DF
Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDF 416

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H 
Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKVAPENAVANAYDMVINGYEVGGGSVRIHN 475

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V 
Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 569


>gi|254482561|ref|ZP_05095800.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214037252|gb|EEB77920.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 574

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 219/568 (38%), Positives = 325/568 (57%), Gaps = 9/568 (1%)

Query: 26  WVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRSAET 84
           WV R R HGG+IFLD+RD  GI QVV +PD+   FE A  VRSE+VL I G V +R   T
Sbjct: 1   WVDRRRDHGGVIFLDMRDREGIVQVVFDPDTEEHFERADRVRSEYVLKITGRVRARGEGT 60

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
           +N  + TG+IE+  +++EIL+ A   P  +       E +R KYR++DLRR  + + ++ 
Sbjct: 61  VNPAMATGEIEVLGKELEILNTAATPPFQLDEHTSVGEEVRLKYRYMDLRRHEMQERLIT 120

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           R++I +++R  +  E F++  TPILT ++PEGARD+LVPSR + G F+ALPQ+PQ +KQL
Sbjct: 121 RSKITSAVRTFLDREGFLDIETPILTRATPEGARDYLVPSRTHPGQFFALPQSPQLFKQL 180

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           LM SGFDRY+Q+A CFRDED R+DR P EF Q+D+E SF+E+++I+   E ++R +F+  
Sbjct: 181 LMVSGFDRYYQVAKCFRDEDLRADRQP-EFTQIDIETSFLEEEEIMGITERMVRELFQ-- 237

Query: 265 SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
           S  +     F  + Y +A+ RYG+DKPDLR  + + +V +     +F+VF        G 
Sbjct: 238 STLDVELPEFPHMPYSEAMERYGSDKPDLRIDMELVSVDDLMQQVDFKVFRGPADDVAG- 296

Query: 325 EVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVN 383
            V A+   GG   +R   D   ++    G  GLA+I      +G      P+ K +    
Sbjct: 297 RVAALKVTGGATISRKEIDDYTKYVSIFGARGLAWIKVNELATGVEGLQSPILKFMPDEV 356

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFY 443
              +  RLD  DGD  FF A             R  +A +  +I    +   W++DFP +
Sbjct: 357 VMQMMERLDAADGDIIFFGADKTRVVNESLGALRIKVAADQNMIR-EGWAPLWVVDFPMF 415

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E  +    +   H+PFT P   +E L      ++ +  YD+V NG E+  G IR H  ++
Sbjct: 416 E-EDGNGGLTPLHHPFTAPSCSVEELVDKPAEAL-SRAYDMVLNGCELGGGSIRIHQRDM 473

Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               F  + IS E  + +FG L +A Q G PPHGG+A G+DRIVML+    ++R+V  FP
Sbjct: 474 QEAVFRILEISDEEADEKFGFLLQALQYGAPPHGGLAFGLDRIVMLMTDCASIRDVIAFP 533

Query: 564 MSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            +Q    ++  +P  V+  QLREL +R+
Sbjct: 534 KTQTAHCVMTDAPGDVNAAQLRELNIRL 561


>gi|126642918|ref|YP_001085902.1| aspartyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 554

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 220/563 (39%), Positives = 325/563 (57%), Gaps = 17/563 (3%)

Query: 41  IRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQ 99
           +RD  G+ QVV +PD+   F  A   RSE+VL I G V  R   T N N+++GQIE+  +
Sbjct: 1   MRDRDGLVQVVIDPDTPEAFATADKARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGK 60

Query: 100 KIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA 158
           +IE+L+ +E  P P+  +     E  R KYRFLD+RR  + + +  R+++ N +R  +  
Sbjct: 61  EIEVLAASETPPFPLNDDTINVSEEHRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYLDD 120

Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
             F++  TPILT ++PEGARD+LVPSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA 
Sbjct: 121 HGFLDVETPILTRATPEGARDYLVPSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAK 180

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
           CFRDED R+DR P EF Q+D+E SF+  DDI++ ME +   +F +          F R+ 
Sbjct: 181 CFRDEDLRADRQP-EFTQIDIETSFLNDDDIMDLMEGMTIKLFNDLL--GVKFEKFRRMP 237

Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-N 337
           Y +A+R Y +DKPDLR P+ + +V +     EF+VF+   + +P   + A+   G G   
Sbjct: 238 YSEAMRDYASDKPDLRIPLKLVDVADLMQEVEFKVFAGP-AKDPKGRIAALRVPGAGSLT 296

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           R+  D   ++    G  GLAYI     E G      P+ K +  +  + +  R+  ++GD
Sbjct: 297 RSQIDEYTKFVGIYGAKGLAYIKVNEIEKGIEGLQSPIVKFIEPIVMQLLE-RVGAENGD 355

Query: 398 SCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
             FF   D  K  + A  A R  I  +L +  C  +   W++DFP +E  ++ K     H
Sbjct: 356 IVFF-GADKAKIVNDAMGALRVKIGHDLNLATCE-WAPLWVVDFPMFEETDDGKWTS-VH 412

Query: 457 NPFTMPQGGMESLKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
           +PFT+P+  +E +K N  + LS+    YD+V NG E+  G +R +  E+    F  +GIS
Sbjct: 413 HPFTLPKSSVEDVKSNPGEALSVA---YDMVLNGTEVGGGSLRIYTLEMQKAIFEALGIS 469

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
            E  E +F  L  A + G PPHGG+A G+DR+VML+ GA ++R+V  FP ++     L  
Sbjct: 470 DEEAEEKFSFLLNALRYGAPPHGGLAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQ 529

Query: 575 SPSTVSVEQLRELGLRIVENPKK 597
           +P+ V   QLR+LG+R+ E  KK
Sbjct: 530 APAPVEANQLRDLGIRLREQQKK 552


>gi|300775946|ref|ZP_07085806.1| aspartate--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300505496|gb|EFK36634.1| aspartate--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 584

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 212/592 (35%), Positives = 340/592 (57%), Gaps = 17/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
           +R+H+ G+L + ++   V LSGWV  +R  G +I++D+RD YGITQ+V + + +     E
Sbjct: 2   FRSHTNGELSLKNLNEEVTLSGWVQTIRDKGFMIWVDLRDRYGITQLVFDQERSSAQLME 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AK +  E+V+   G V+ R ++  N NI TG+IE+  +K+ IL+ ++  P  +  E + 
Sbjct: 62  EAKKLGREFVIQATGKVIERVSK--NPNIPTGEIEILVEKLTILNDSQLPPFTIEDETDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR+ +   ++ R ++   +R  +  E FIE  TP+L  S+PEGARDF
Sbjct: 120 GEELRMKYRYLDIRRNPVKDKLIFRHKMAQKVRNYLSDEGFIEVETPVLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNPGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+D++N  E + + + ++ +       +F R+ + DA+R+YG DKPD+R  +   
Sbjct: 239 MAFVEQEDVMNVFEGMTKTLLKDITGQEF--GDFPRMTFADAMRKYGNDKPDIRFGMEFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
            + E     +F++F      +    V  I  +G     R   D + +W + + Q G + +
Sbjct: 297 ELNELVKGKDFKIF------DDAELVVGINVEGCAEYTRKQIDELVDWVK-RPQIGASGM 349

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            W   ++  V     V K  N  +   I  +   ++GD    ++G+  K  +  +  R  
Sbjct: 350 VWVKFQNDGVK-TSSVNKFYNEEDLAKIIEKFGAKEGDLMLILSGNENKVRAQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +   LG+   N F   W++DFP  EW+EE ++    H+PFT P+     L   D    +A
Sbjct: 409 LGNRLGLRKGNEFAPLWVVDFPLLEWDEETERYHAMHHPFTSPKPEDIHLLETDPGKARA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G IR    ++  + F  +G ++E  E +FG L  AF+ G PPHGG+
Sbjct: 469 NAYDMVLNGNEIGGGSIRIFDKDLQSKMFDLLGFTREEAEAQFGFLMNAFKYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G DR+V +L G + +R+   FP + +  D+++ +P++++  QL EL L++
Sbjct: 529 AFGFDRLVAILDGNEVIRDYIAFPKNNSGRDVMIDAPASIADAQLDELELQL 580


>gi|309789262|ref|ZP_07683855.1| aspartyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308923016|gb|EFP68530.1| aspartyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 573

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 218/574 (37%), Positives = 324/574 (56%), Gaps = 9/574 (1%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRS 81
           L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G V +R 
Sbjct: 3   LCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARD 62

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            + IN ++ TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR  + + 
Sbjct: 63  EKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQR 120

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +
Sbjct: 121 LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLF 180

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R ++
Sbjct: 181 KQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLW 239

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
            E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   +  
Sbjct: 240 LEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDL 297

Query: 322 PGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
            G  V A+   GG    R   D    + +  G  GLAYI       G      PVAK LN
Sbjct: 298 KG-RVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLN 356

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
               EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W++DF
Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDF 416

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H 
Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHN 475

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V 
Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 569


>gi|224499821|ref|ZP_03668170.1| aspartyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 552

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 218/558 (39%), Positives = 318/558 (56%), Gaps = 13/558 (2%)

Query: 41  IRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSA 98
           +RD  GI QVV NP+      EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A
Sbjct: 1   MRDREGIVQVVFNPEFSKEALEIADSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLA 60

Query: 99  QKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA 158
           ++I IL+ ++  P  +       + +R KYR+LDLRR  ++     R  +  + R ++ A
Sbjct: 61  EEITILNTSKTPPFYIEDGVNVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDA 120

Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
             F +  TP LT S+PEGARD+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  
Sbjct: 121 LGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVR 180

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
           CFRDED R DR P EF Q+D+E SF+ +++I    E++L  V +E  N  T+   F R+ 
Sbjct: 181 CFRDEDLRGDRQP-EFTQIDLETSFLTKEEIQAITEDMLVDVVKEAKN-ITIEKPFPRMT 238

Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-- 336
           Y +A+ R+G+DKPD+R  + + NV++     +F+VF    ++  G EV AI AK      
Sbjct: 239 YKEAMDRFGSDKPDIRFGLELQNVSDVVKDVDFKVFQS--AIENGGEVKAINAKAAAANF 296

Query: 337 NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
           +R   D +  +  + G  GLA   W   E+G +   GP+AK         ++V L  +DG
Sbjct: 297 SRKDLDALGVFVANYGAKGLA---WLKVEAGELK--GPIAKFFPEDKAAELKVALQAEDG 351

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D   F A       +     RN + ++L +IN     F W+ D+P +E++EE  +   AH
Sbjct: 352 DLLLFAADKADIVAASLGALRNKLGKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAH 411

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +PFT+P+     L   D   + A  YD+V NG+EI  G +R +  EV    F  +G + E
Sbjct: 412 HPFTLPKEEDIPLLETDSSKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDE 471

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
             + +FG L  A + G PPHGGIA G+DRIVM+L G  N+R+   FP + +  D L  +P
Sbjct: 472 SAKEQFGFLMDALEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAP 531

Query: 577 STVSVEQLRELGLRIVEN 594
             VS  QL EL L  V+ 
Sbjct: 532 GEVSEAQLAELKLETVKK 549


>gi|241895558|ref|ZP_04782854.1| aspartyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241871136|gb|EER74887.1| aspartyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 601

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 214/588 (36%), Positives = 331/588 (56%), Gaps = 19/588 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+  G +    +   V L GWV + R  GG+IF+D+RD  GI Q+  + +      ++A
Sbjct: 3   RTNYAGLIDEKYLDQTVTLQGWVQKRRDLGGLIFVDLRDREGIVQLAFSNEFGEEALKVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +R+E+V+ I G V SR    +N ++ +G+IE+     +ILS ++  P  +  +    +
Sbjct: 63  EDMRTEYVIEIVGDVKSRGEGAVNEHLHSGKIEVHVTSAKILSASKTTPFYIEDDINVSD 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + +N+  R++I  +    + A  FI+  TP L  S+PEGARD+LV
Sbjct: 123 ELRLKYRYLDLRRPEMQRNLRIRSKITAATHEFLDANGFIDIETPYLAKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFDRY+Q+A  FRDED R DR P EF QLD+EMS
Sbjct: 183 PSRVYPGSFYALPQSPQLFKQLLMGAGFDRYYQVARAFRDEDLRGDRQP-EFTQLDVEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+I++ + + +  + +   N          + Y D++RR+GTDKPD+R  + + ++
Sbjct: 242 FMNQDEIMDLVSDWVAAIMKRTVNYYLDKATIPVLDYADSMRRFGTDKPDMRFGMELQDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYIF 360
           +     +EF VF+   ++  G EV AI   GG  +  R   D+M ++    G  GLA++ 
Sbjct: 302 SALMADAEFGVFAN--AIKNGGEVKAIVVPGGANHYSRKDIDKMAQYVTRFGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               + G+    GP+AK L      A+    + + GD   F A +     +     R   
Sbjct: 359 ----KVGDEGVSGPIAKFLK-AKEAALLETTNAKSGDLLLFAADNANVVAATLDALRRRT 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG----MESLKGNDLLS 476
           AQEL +I+ N + F W++++P +++  EE +   AH+PFTMP       + + +G     
Sbjct: 414 AQELELIDENNWAFAWVVNWPLFDYQPEEDRWIAAHHPFTMPNEEDLPLLATTEGAH--Q 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YDLV NG+E+ SG IR H  +V  +  + +G +KE     FG L    + G PP 
Sbjct: 472 AHAQSYDLVLNGYELGSGSIRIHQMDVQEKMLAALGFTKEAAHEAFGFLLEGMEYGFPPM 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           GGIA G+DR+ MLL G  N+REV  FP +    + +  +P+ V+  Q+
Sbjct: 532 GGIALGLDRLAMLLAGQDNIREVIAFPKNSKATEPMTEAPTPVAKAQV 579


>gi|260772664|ref|ZP_05881580.1| aspartyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611803|gb|EEX37006.1| aspartyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 591

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 227/596 (38%), Positives = 335/596 (56%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD      IA 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMVDVLNIAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + G V +R    IN ++ TG +E+ A+ ++I++ +E LPL     ++  E 
Sbjct: 62  QVRNEFCIKLTGEVRARPDSQINQDMATGAVEVLAKDLQIINRSEALPLD--SNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDGHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    E ++R ++ E  + +     F  + Y +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVRAVTEQMIREMWLELLDVDL--GEFPVMPYSEAIRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   +   G  V A+   GG   +R   D    +    G  GLA++   
Sbjct: 297 DLLKDVDFKVFSGPANDEKG-RVAALRVPGGAALSRKQIDEYTAFVAIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PVAK LN    + I  R   ++GD   F A +           R  + +
Sbjct: 356 DRAAGLEGIQSPVAKFLNAEIVQTIMERTQAENGDIILFGADNANVVAEAMGALRLKVGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +L I N   +   W++DFP +E  + E  +   H+PFT P     E LK +   ++ +  
Sbjct: 416 DLAITNGATWAPLWVVDFPMFE-TDSEGNVAAMHHPFTAPLNMTAEELKASPSNAL-SNA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H + +    F  +GI +     +FG L  A + G PPH G+A 
Sbjct: 474 YDMVLNGYEVGGGSVRIHDATMQSAVFDLLGIDEHEQRLKFGFLLDALKYGTPPHAGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K
Sbjct: 534 GLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSVANPAALEELAIAVTAAKEK 589


>gi|323144092|ref|ZP_08078733.1| aspartate--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322416134|gb|EFY06827.1| aspartate--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 587

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 214/592 (36%), Positives = 329/592 (55%), Gaps = 12/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-AK 63
           R+  C ++  + V   V L GWV+R R  GG+IF+D+RD  GI QVV  PD+      A 
Sbjct: 2   RSLYCAEVNSAHVSEQVTLCGWVNRRRDLGGLIFIDLRDRSGIVQVVFEPDNHDLHAKAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R E+ + + G V +R A+ +N+ + TG+IE+ A  + I +  +  PLP+   ++  E 
Sbjct: 62  TLRGEYCIKVVGSVKARPADQVNSKMATGEIEVYATDLTIFN--KSAPLPIDFNQDNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  +   +  R  I   +R  + A  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLRYRYLDLRRPEMVHKMTVRAYITRYVRHFLDAHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR++ G FYALPQ+PQ +KQLLM +G+DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRIHHGKFYALPQSPQLFKQLLMIAGYDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   D+ + ME ++ G+F+E +  +      +R  YD+A+ R+G+DKPDLR    +H + 
Sbjct: 239 MTSQDVRDIMEEMMVGLFKEVAGYDLGKLPVMR--YDEAMERFGSDKPDLRISYELHTLC 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   +SEF+V S   + +P   V      GG    R   D   ++ +  G  GL +I   
Sbjct: 297 DAVRNSEFKVLSAPAN-DPDSRVVGFAVPGGAAMTRREIDGYTDFVKKLGASGLIWIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G       +AKH+      ++    + + GD  F  AG   K  +     R   A+
Sbjct: 356 DLEKGAEGLHSSIAKHVTPDELISLVTMANGKSGDIVFIGAGKHNKISTVMGALRLQTAK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQ 481
           + G++  + ++  W++DFP +E   EE  +   H+PFT P G   E L  N  +S+ A  
Sbjct: 416 DKGLV-ADGYKALWVIDFPMFEMT-EEAGLTAMHHPFTAPSGVTPEELIANP-MSVYADA 472

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E   G +R +   +    F  +GI+      +FG L  A   G PPH G+A 
Sbjct: 473 YDLVINGYESGGGSVRIYDENMQQAVFKVLGITDSEAREKFGFLLDALSFGAPPHAGLAF 532

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G+DR+ MLL G  N+R+V  FP +     L+  +P+  S + L+EL + I +
Sbjct: 533 GLDRVTMLLTGTDNIRDVIAFPKTTAAACLMTQAPNVASPDALKELAIAITD 584


>gi|116492877|ref|YP_804612.1| aspartyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122265659|sp|Q03F52|SYD_PEDPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116103027|gb|ABJ68170.1| aspartyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 593

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 217/603 (35%), Positives = 340/603 (56%), Gaps = 24/603 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT   G +     G  V L GWV + R  G +IF+D+RD  GI Q+V + +  +   +IA
Sbjct: 3   RTTYAGLVNEQYTGQTVTLKGWVQKRRDLGQLIFIDLRDREGIVQLVFSSEFSADALKIA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+E+VL I G+V  R  + +N  + TGQIE+  Q+ +IL+ A+  P  +       +
Sbjct: 63  DQLRNEYVLEITGIVKQRKEKDVNPKMKTGQIEVEVQQAKILNSAKTPPFDIEDGVSASD 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++ KYR+LDLRR  + K +  R RI  ++   +  + F++  TP LT S+PEGARD+LV
Sbjct: 123 ELKMKYRYLDLRRPEMLKGLKIRNRITQAVHSYLDEQGFLDIETPDLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLM +G DRY+Q+A CFRDED R DR P EF Q+D+E S
Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMGAGIDRYYQLARCFRDEDLRGDRQP-EFTQIDLETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I +  E ++  V ++  + + V   F RI + +++ R+GTD+PD+R  + + ++
Sbjct: 242 FLTAEEIQDITEGLIARVMKDTLDID-VKLPFDRISWKESMDRFGTDQPDVRFGMELKDI 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     SEF+VFS  ++     +  A+P      +R   D++ ++    G  GLA++  +
Sbjct: 301 SSIVADSEFKVFSGAVANGGVVKAIAVPDGANNLSRKDIDKLGKYVERFGAKGLAWL--K 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA------GDPLKFCSFAADA 416
           + + G     GPVAK  N    + I  +   Q GD   F A      GD L +       
Sbjct: 359 ITDDGF---SGPVAKFFNAETEKQIMEQTGAQVGDLLLFAADRAKVVGDTLGYL------ 409

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL-KGNDL 474
           R  +A+   +I+ + F F W++D+P ++++E +++   AH+PFTMP +  +  L +G D 
Sbjct: 410 RVELAKRFDMIDEDQFAFLWVVDWPLFDYDEGDQRWVAAHHPFTMPNEEDVHYLDEGEDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               A  YD++ NG E+  G IR +  E+  +    +G S E   ++FG L  A   G P
Sbjct: 470 HQAHAQSYDIILNGLELGGGSIRINTRELQEKMLKALGFSLESANDQFGYLLTALDYGFP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VE 593
           PHGG+A G+DR   LL+   N+R+V  FP +    + +  +P+ VS EQL EL L I V 
Sbjct: 530 PHGGLAIGLDRFARLLVKRDNIRDVIAFPKNSKASEPMTEAPTMVSEEQLAELSLDIDVR 589

Query: 594 NPK 596
            P+
Sbjct: 590 KPE 592


>gi|116333383|ref|YP_794910.1| aspartyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|116098730|gb|ABJ63879.1| aspartyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 600

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 214/586 (36%), Positives = 338/586 (57%), Gaps = 16/586 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT   G +  + +   V L GWV + R  G +IF+D+RD  GI Q+V + +   A   +A
Sbjct: 7   RTTYAGLVDEAYLDQTVVLKGWVQKRRDLGSLIFIDLRDREGIVQLVFSEEYSQAALAVA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+E+V+ + G V++R+ + +NA++ TG++E+    I +L+ ++ LP  +  +    +
Sbjct: 67  DQLRNEYVIEVQGQVVARADKEVNADMRTGKVEVRVTGINLLNKSKALPFDIKDDLNASD 126

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLRR  + + I  R RII S+        FI+  TP LT S+PEGARD+LV
Sbjct: 127 ELRLQYRYLDLRRPEMQRAIRLRNRIIQSVHSYFDNNGFIDIETPNLTKSTPEGARDYLV 186

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R DR P EF Q+D+E S
Sbjct: 187 PSRIYPGHFYALPQSPQLFKQLLMGSGFDRYYQIARCFRDEDLRGDRQP-EFTQIDLETS 245

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I +  E ++  V ++  N + V   F R+ +DD++ RYGTD+PD+R  + + ++
Sbjct: 246 FLTAEEIQDLTEGLIAKVMKDTLNVD-VKLPFQRMDWDDSMARYGTDQPDVRFGMELKDL 304

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           +E    ++F+VFS   +V  G +V AI   GG    +R   D+  ++    G  GLA++ 
Sbjct: 305 SEMMADTDFKVFSG--AVANGGQVKAIAVPGGADLYSRKDLDKYGKYIERFGAKGLAWL- 361

Query: 361 WRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            ++ + G     GP+AK     +  + I    D + GD   F A             R  
Sbjct: 362 -KVTDDGF---SGPIAKFFKEGDWFDQITAATDAKSGDLLLFAADSKRVVAQTLGYLRVA 417

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLK-GNDLLSI 477
           IA+E  +I+ N + F WI+++P ++++ + ++   AH+PFTMP +G    L  G D    
Sbjct: 418 IAKEQDMIDENKWAFLWIVNWPLFDYDVDLERWVPAHHPFTMPAEGDAHYLNDGEDPHKA 477

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD++ NG E+  G IR H  E+ ++    +G + E  E++FG L +A   G PPHG
Sbjct: 478 YAQSYDIILNGLELGGGSIRIHTRELQMKMLKALGFTPERAESQFGFLLKALDYGFPPHG 537

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
           G+A G+DR   LL    N+R+V  FP +    + +  +P+TV+ +Q
Sbjct: 538 GLAIGLDRFARLLAKRDNIRDVIAFPKNSKATEPMTEAPTTVADKQ 583


>gi|332756767|gb|EGJ87114.1| aspartyl-tRNA synthetase [Shigella flexneri 4343-70]
          Length = 573

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 217/574 (37%), Positives = 324/574 (56%), Gaps = 9/574 (1%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRS 81
           L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G V +R 
Sbjct: 3   LCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARD 62

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            + IN ++ TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR  + + 
Sbjct: 63  EKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQR 120

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +
Sbjct: 121 LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLF 180

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R ++
Sbjct: 181 KQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLW 239

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
            E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + +
Sbjct: 240 LEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-D 296

Query: 322 PGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
           P   V A+   GG    R   D    + +  G  GLAYI       G      PVAK LN
Sbjct: 297 PKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLN 356

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
               EAI  R   QDGD  FF A +              + ++LG+ + + +   W++DF
Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGKDLGLTDESKWAPLWVIDF 416

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H 
Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHN 475

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V 
Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            FP +     L+  +PS  +   L EL +++V+ 
Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALAELSIQVVKK 569


>gi|254516712|ref|ZP_05128771.1| aspartyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219675135|gb|EED31502.1| aspartyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 570

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 220/575 (38%), Positives = 339/575 (58%), Gaps = 13/575 (2%)

Query: 27  VHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRSAETI 85
           + R R HGG+IFLD+RD  GI QVV +PD+   F  A  VRSE+VL + G V +RS  T+
Sbjct: 1   MDRRRDHGGVIFLDLRDREGIVQVVFDPDTEEHFATADRVRSEYVLKVTGRVRARSDATV 60

Query: 86  NANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKR 145
           N ++ TG+IE+  ++IE+L+ A   P  +       E +R +YR++DLRR  + + +  R
Sbjct: 61  NPSMDTGEIEVLGKEIEVLNTAATPPFQLDEHTSVGEEVRLRYRYMDLRRPEMQQRLRLR 120

Query: 146 TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
           +R+ +++R  +  E F++  TPILT ++PEGARD+LVPSR + G F+ALPQ+PQ +KQLL
Sbjct: 121 SRVTDAVRRFLHEEGFLDIETPILTRATPEGARDYLVPSRTHPGQFFALPQSPQLFKQLL 180

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           M SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF+++  I+   E ++RG+F+   
Sbjct: 181 MVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSFLDEAAIMEITERMVRGLFQSVL 239

Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
           +    S  F  + + +A+ R+G+DKPDLR P+ + +V +     +F+VF +  + +P   
Sbjct: 240 DVELPS--FPHMTWAEAMERFGSDKPDLRIPLELVSVDDLMQQVDFKVF-RGPADDPLGR 296

Query: 326 VWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM-GPVAKHLNIVN 383
           V A+   GG   +R   D    +  + G  GLA+I    D +  V G+  P+ K +    
Sbjct: 297 VAALRVPGGASISRKEIDDYTRYVGNYGARGLAWIKVN-DLAAGVEGLQSPILKFMPDDV 355

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPF 442
              +  RL+  DGD  FF A D     + A  A R  +  + G+++   +   W++DFP 
Sbjct: 356 VAQMMSRLEAADGDIIFFGA-DRASIVNEALGALRIKVGADQGLVS-EGWAPLWVVDFPM 413

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E ++        H+PFT P   + +L  +   ++ +  YD+V NG E+  G +R H  E
Sbjct: 414 FE-DDGNGGWTPLHHPFTAPACDLSTLSQHPGEAL-SRAYDMVLNGTELGGGSVRIHNLE 471

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                F  +GI +E    +FG L  A + G PPHGG+A G+DRIVML+ G+ ++R+V  F
Sbjct: 472 TQEAVFDILGIDREEAREKFGFLLDALKYGAPPHGGLAFGLDRIVMLMTGSASIRDVIAF 531

Query: 563 PMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           P +Q    ++  +P TV   QLR+L +R+ E  KK
Sbjct: 532 PKTQTAACVMTEAPGTVGAAQLRDLHIRLREPEKK 566


>gi|302024636|ref|ZP_07249847.1| aspartyl-tRNA synthetase [Streptococcus suis 05HAS68]
          Length = 505

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 209/513 (40%), Positives = 302/513 (58%), Gaps = 18/513 (3%)

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
           E  N NI TG +EL    + +L+ A+  P  +    E  +  R +YR+LDLRR  +  N 
Sbjct: 4   EQANDNIPTGAVELQVTSLTVLNTAKTTPFEIKDGIEASDDTRLRYRYLDLRRPEMLNNF 63

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202
             R  + +S+R  +    FI+  TP+LT S+PEGARD+LVPSRV++G FYALPQ+PQ  K
Sbjct: 64  KLRAAVTHSIRNYLDELEFIDVETPMLTKSTPEGARDYLVPSRVSKGHFYALPQSPQITK 123

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           QLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E SF+ + +I + +E ++  V +
Sbjct: 124 QLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLETSFLNEVEIQDIVEGLIAKVLK 182

Query: 263 EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNP 322
           + + G  V+  F R+ YD A+  YG+DKPD R  +++ ++TE     +F+VFS+   V  
Sbjct: 183 D-TKGIDVTLPFPRMAYDHAMNFYGSDKPDTRFEMLLQDLTELVKEVDFKVFSEAPVVK- 240

Query: 323 GYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
                AI  KG     +R   D++ ++A+  G  GLA   W   + G +AG  PVAK L 
Sbjct: 241 -----AIVVKGAADCYSRKDIDKLTDYAKQFGAKGLA---WVKVDKGELAG--PVAKFLT 290

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMD 439
            + TE +   L ++D D   F+A D L+  +    A RN +A+E G+I+ + F F WI+D
Sbjct: 291 GI-TENLTASLQLEDKDLVLFVA-DELEVANNTLGALRNRLAKEQGLIDESKFNFLWIVD 348

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           +P +EW+EEE +   AH+PFT+P          DL  ++A  YD+V NG+E+  G +R +
Sbjct: 349 WPMFEWSEEEGRYMSAHHPFTLPTEETAHHLDGDLAQVRAVAYDIVLNGYELGGGSLRIN 408

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             ++  + F  +G S E    +FG L  A   G PPHGG+A G+DR VMLL G  N+REV
Sbjct: 409 QKDMQERMFKALGFSAEDAHEQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGEDNIREV 468

Query: 560 SLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
             FP +    D +  +PSTV+  QL EL L I 
Sbjct: 469 IAFPKNNKASDPMTQAPSTVASAQLEELALNIT 501


>gi|325283191|ref|YP_004255732.1| aspartyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324315000|gb|ADY26115.1| aspartyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 575

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 224/593 (37%), Positives = 331/593 (55%), Gaps = 24/593 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT   G+L  +++G  V L GWV   R  GG+IF ++RD  G  QV  +P  A  F  A 
Sbjct: 3   RTALIGELTDANLGP-VTLQGWVSGRRNLGGLIFFELRDRSGAVQVQVDPAQAEAFAQAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+V  + G    R  E           E+ A  + IL+ A+  P  +    E  E 
Sbjct: 62  ELRAEFVAEVTGTYGLRPQEQRKGG--PADYEVLADGVRILNRAKTPPFELDKGGEVSED 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR+LDLRR  + + ++ R+R   ++   M  E FI   TP+LT S+PEGARDFLVP
Sbjct: 120 VRLRYRYLDLRRPEMQRGLMLRSRTWAAITEFMEREGFINIETPMLTRSTPEGARDFLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+N+G FYALPQ+PQ +KQ+LM +G+DRY+Q+A CFRDED RSDR P +F QLDMEMSF
Sbjct: 180 SRLNEGEFYALPQSPQLFKQMLMMAGYDRYYQLARCFRDEDLRSDRQP-DFTQLDMEMSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+Q+D+L+    +L  +F +   G  +S    R+ Y +A+ +YG+DKPDLR    + +VT
Sbjct: 239 VDQEDVLDMNSRLLAHIFGQVM-GQQLSLPLPRLTYQEAMDKYGSDKPDLRFEHALVDVT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           + F   EF+ F+   +V    +V A P       R   D +   A+  G  GLA++    
Sbjct: 298 DLFAGGEFKAFAGAEAV----KVIAAPEL----TRKAIDELERVAKQNGAGGLAWL---- 345

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G     G ++K +  +  + ++ R  ++DG +  F AGD  +    A  A     ++
Sbjct: 346 -KRGGEGFTGGISKFVAGITPQLLK-RTGVEDGGTLLFTAGD-WRTAVEALGAVRLALRD 402

Query: 424 LGIINCNCFEFC--WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL-SIKAF 480
           L        +F   W+ DFP  +++++     + H+PFT P     +L G +    I+A 
Sbjct: 403 LFDWTAGGPQFAPLWVTDFPQLDYDKDSGTWTYMHHPFTAPHPDDTALFGTERQHEIRAQ 462

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NGFEI  G +R H  +   + F  +G+S E  + +FG    A + G PPHGG A
Sbjct: 463 AYDLVMNGFEIGGGSVRIHSPQTQREMFRAIGLSDEEAQEKFGFFLEALEYGTPPHGGAA 522

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G DR+VM+L GA ++R+V  FP +    DL+ G+PS V+  QL ELGLR+ E
Sbjct: 523 WGFDRLVMVLSGAASIRDVIAFPKNNRGQDLMAGAPSPVAEGQLEELGLRVQE 575


>gi|300173445|ref|YP_003772611.1| aspartyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887824|emb|CBL91792.1| Aspartyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 588

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 215/600 (35%), Positives = 334/600 (55%), Gaps = 24/600 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63
           RT   G +    +G  V LSGWV + R  G +IF+D+RD  GI Q+  +  +     +A+
Sbjct: 3   RTTYAGLIDEKYLGQTVTLSGWVQKRRDFGDLIFVDLRDREGIVQLTFSATNQIALSVAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+V+ I GLV++R+ + +N  I +G+IE++    +IL+ ++  P  +       E 
Sbjct: 63  EMRSEYVISITGLVVNRNDDQVNNKIKSGKIEINVTDAKILATSKTPPFYIENGVNANEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           ++ KYR+LDLRR  + +N+  R++I++S    M   +FI   TPIL  S+PEGARD+LVP
Sbjct: 123 LKLKYRYLDLRRPEMQQNLRIRSKIMSSAMHFMDQNDFINIETPILAKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+  GSFYALPQ+PQ +KQLLM +GFDRYFQIA  FRDED R DR P EF Q+D+E SF
Sbjct: 183 SRIFPGSFYALPQSPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQP-EFTQMDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D+I   +   ++ +  +  N +  +     + + +++ R+GTDKPDLR    + +++
Sbjct: 242 MSADEIRTLVNAWVKTMMHDVVNFDLDTAKIPTLTWQESMDRFGTDKPDLRIAYELKDLS 301

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
                S+F VF+  +      +  A+P      +R   D++ ++    G  GLA++  ++
Sbjct: 302 SIVKTSDFGVFTNAIKAGGVVKAIAVPGGADKYSRKGLDKLAQYIERFGAKGLAWL--KV 359

Query: 364 DESGNVAGMGPVAKHL----NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            + G     GP+AK      ++++    +V      GD   F AG      +     R  
Sbjct: 360 TDEGL---KGPIAKFFPEGNDLIHATGAKV------GDLLLFGAGRTDIVAATLDYLRRQ 410

Query: 420 IAQELGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL----KGNDL 474
            A++L ++N  N + F WI+D+P +E++E+  +   AH+PFTMP    E L    +G D 
Sbjct: 411 TAKDLELVNQENAWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPN--EEDLHYLDEGEDP 468

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               A  YDLV NG+E+ SG IR H   +  +    +G + E     FG L      G P
Sbjct: 469 HQAHAQSYDLVLNGYELGSGSIRIHNMAIQEKMLKALGFTPEAAHEAFGFLLEGMDFGFP 528

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           P GGIA G+DR+ MLL G +N+REV  FP +    + +  +P  V  +QL +LGL + EN
Sbjct: 529 PMGGIALGLDRLAMLLAGQENIREVIAFPKNSRATEPMTQAPMPVDGKQLNDLGLFVPEN 588


>gi|219681679|ref|YP_002468065.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682234|ref|YP_002468618.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471370|ref|ZP_05635369.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254781721|sp|B8D9A6|SYD_BUCA5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781722|sp|B8D7K8|SYD_BUCAT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219621967|gb|ACL30123.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624522|gb|ACL30677.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086054|gb|ADP66136.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086627|gb|ADP66708.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087731|gb|ADP67810.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 586

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 223/591 (37%), Positives = 336/591 (56%), Gaps = 15/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           RT  CG++ +S V   V+L GWVH+VR  G  IF+D+RD+ G+ QV+    +   F+ A 
Sbjct: 2   RTKYCGNIRISHVNKKVKLCGWVHKVRNLGQFIFVDMRDYTGLVQVIFELKNYTIFKKAL 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R  +  N  I TG+IE+ A  + IL+ ++ LPL     +E  + 
Sbjct: 62  NLRNEFCIQVFGTVQKREKKNQNIKIRTGEIEILANVLNILNTSKSLPLNF--TQENNDD 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLR   + +N+  R +I   +R  M  +NF++  TPILT S+PEGARD+LVP
Sbjct: 120 SRLKYRYLDLRSFDILENLKIRNKITYLIRNFMTKKNFLDIETPILTKSTPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G FYALPQ+PQ +KQ+LM SG DRY+QI  CFRDED RSDR P EF Q+D+E+SF
Sbjct: 180 SRNHYGKFYALPQSPQLFKQILMISGIDRYYQIVKCFRDEDLRSDRQP-EFTQIDIEVSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    I N +EN+++ ++ E  N N     F +I + +A+++YG+DKPDLRNPI + +V+
Sbjct: 239 MSAKKIRNLVENLIKKLWLEIRNINL--KKFPQISFHEAMKKYGSDKPDLRNPIEIIDVS 296

Query: 304 EHFVHSEFRVFSKILSVNPGYE---VWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
             F   +F  F    ++NP           +KG   +R   D   ++ +      L YI 
Sbjct: 297 NIFKDKKFISF---FNLNPQKNNRIALLCISKGAHLSRKKIDDYTKYVQRFDAKKLFYIK 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +  + G +     +   L+ +  + I  +   ++GD  F IA             R  I
Sbjct: 354 IKECKLGCLGIHSSIKNILDEIILKEIIEKSQSKNGDILFLIADQEHIVNKSLGMLRLKI 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
             +L I   N +E  WI++FP ++  + +  +   H+PFT  +    E LK +  L+I +
Sbjct: 414 GIDLNITKKNRWEPLWIVNFPMFD-KDIQGNLSSVHHPFTAVKNMDREILKNSPDLAI-S 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDL+ NG+EI  G +R H   +  Q F  +GI K +   +FG L  A + G PPH GI
Sbjct: 472 DSYDLIINGYEIGGGSVRIHDVNMQKQVFDIIGIKKSMQNEKFGFLIEALKYGAPPHAGI 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           A G+DRIVMLL  +KN+R+V  FP + +   L+  SPSTV    L+EL ++
Sbjct: 532 ALGLDRIVMLLTNSKNIRDVIAFPKTTSATCLMTNSPSTVDNLLLQELAIK 582


>gi|83319674|ref|YP_424308.1| aspartyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|90110073|sp|Q48979|SYD_MYCCT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|83283560|gb|ABC01492.1| aspartyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 575

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 211/591 (35%), Positives = 337/591 (57%), Gaps = 20/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L + +V   V L GWV ++R  G ++F+D++D YGITQ+V   ++    +  +
Sbjct: 3   RTHTCGELTLQNVDQKVILQGWVKKIRKLGAMVFIDLKDRYGITQLVIEQENIN--LINN 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +++E+V+ I G+V+ R  +++N  +ITG+IE+  + + +++ +E  P  +  +    E  
Sbjct: 61  LKNEYVIEISGIVVKR--KSVNKELITGEIEVIVKDLLVINKSELTPFVLENDVNVNEDT 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  YR+LDLRR  +  N++ R +I + +R  +   NF+E  TP    S+PEGAR FLVPS
Sbjct: 119 RLTYRYLDLRRQVMQNNLIIRAKINHIIRNYLTDLNFLEVETPYFAKSTPEGARHFLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+N+  FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R DR P EF QLD+EMSF 
Sbjct: 179 RLNKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQP-EFTQLDLEMSFA 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             +D++   E++++ + +E  N   +    LR+ Y DAI  YG+DKPDLR  + +H + +
Sbjct: 238 TSEDVMQISESLIKKILKEVKNFE-IKEPLLRLSYKDAIDLYGSDKPDLRYELKIHTLND 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F +S+ ++F   L     Y + A+        +   + +N+ A+      +A+I     
Sbjct: 297 IFKNSDIKMF---LDSQNKY-IRAVCIDQLLTKKQL-EELNQQAKQFHFNSIAFI----- 346

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           +  N A  G +A  L  V  + +    ++Q+  +     G   +        R  +A+  
Sbjct: 347 KVENNAWSGSLASQLTEVQKKQLIEEFNIQNKATIILNIGKYEEISQLMGAIRISLAKMF 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF--QY 482
            +   + F+  W++DFP +E++E+E +   AH+PFT P+   ESL   D     A    Y
Sbjct: 407 NLETKDDFKLLWVVDFPLFEFSEQENRYVAAHHPFTSPKE--ESLADFDTNKKDALACAY 464

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NGFEI  G  R   SE+  + F  V ++++ VE  FG    A++ G P H GIA G
Sbjct: 465 DLVMNGFEIGGGSQRITNSEIQQRMFDAVELNQKQVEANFGWFMNAYKYGAPYHAGIAWG 524

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DRI M+L  + ++R+V  FP +    D++  +P  VS +QL EL ++ VE
Sbjct: 525 LDRISMILTDSNSIRDVIAFPKNSLGIDMMSNAPDLVSDKQLDELNIKTVE 575


>gi|315634730|ref|ZP_07890014.1| aspartate--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476678|gb|EFU67426.1| aspartate--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 588

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 214/592 (36%), Positives = 338/592 (57%), Gaps = 11/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RSHYCGALNRANIGQEVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+ ++I + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPDNQINKNMATGEVEVLAKALKIYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G+++     +     F  + + +A+ R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAPEVREIMERMVHGLWQNIIGVDL--GKFPVMTWHEAMNRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF    + +P   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DLVKEVDFKVFQGPAN-DPNGRVAVIRVPNGSEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G  +   P+AK L     +A+  R+  Q+GD  FF A             R  + +
Sbjct: 357 DINAGLESVQSPIAKFLTEDVWKALAERVKAQNGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQ 481
           +LG+   + ++  W++DFP +E  ++E  +   H+PFT P+    E L+     ++ A  
Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDDEGNLAAMHHPFTSPRDFTPEQLEAEPTTAV-ANA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R    ++    F  +GI+++    +FG L  A + G PPH G+A 
Sbjct: 475 YDMVINGYEVGGGSVRIFDPKMQQTVFRILGINEQEQREKFGFLLDALKFGTPPHAGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G+DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL +++V+
Sbjct: 535 GLDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALAELSIQVVK 586


>gi|288921169|ref|ZP_06415456.1| aspartyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288347426|gb|EFC81716.1| aspartyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 603

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 227/595 (38%), Positives = 326/595 (54%), Gaps = 22/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH CGDL + + G  V + GWV   R HG  ++F+D+RDH G+ Q V +        + 
Sbjct: 16  RTHLCGDLRLDNAGQRVTVCGWVAHRRQHGQSLMFVDLRDHSGLLQCVVDG-------SV 68

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122
             RSE+VL I G V  R   T N  + TG +EL+   +E+LS A   P P+    +   E
Sbjct: 69  DARSEYVLRITGTVSVRPEGTANPALATGDVELTDCSVEVLSTATPPPFPLDDRADSVEE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R  YR+LDLRR+ + +N+  R+ ++ ++R       F+E  TP+L  S+PEGAR+F+V
Sbjct: 129 GTRLAYRYLDLRRERMQRNLRTRSAVLGALRSAFADSGFVEVETPLLMPSTPEGAREFVV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   GSFYALPQ+PQ +KQLLM  G DRYFQ+A C RDED R+DR   EF QLD+EMS
Sbjct: 189 PSRQFPGSFYALPQSPQLFKQLLMVGGMDRYFQLARCLRDEDLRADRQ-YEFTQLDLEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-RICYDDAIRRYGTDKPDLRNPIIMHN 301
           FV+ DD+L  + + +         G+  +   + R+ + DA+ R+G DKPDLR  + +  
Sbjct: 248 FVDVDDVLGVVSSAVLAAAGAAVEGSGRAMPPIERLTWHDAMNRFGVDKPDLRFGMELVE 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T  F +S F+ F+      P  +   +P      NR   D + + A+  G  GL ++  
Sbjct: 308 LTAIFGNSGFKAFAGA----PAVKGIRVPGGSATHNRKALDTLTDRAKKLGAKGLVWM-- 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R+  +G +    PVAK L+     AI      Q+GD    +A +    C      RN + 
Sbjct: 362 RVAAAGALES--PVAKFLSAEELAAIVAATQAQEGDLLLLVADEWETACEVLGQLRNDLG 419

Query: 422 QELGIINCNCFEFCWIMDFP-FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           +           F W++DFP F   +    +    H+PFT P         +D L++++ 
Sbjct: 420 RPPA--GEGELRFVWVVDFPLFVGVDATTGRPKPGHHPFTRPHPSDVEKMESDPLAVRSL 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+ SG IR H SE+  + F  +GIS +  + RFG     F  G PPHGG A
Sbjct: 478 AYDLVLNGWELGSGSIRIHESELQQRIFGLLGISPDEAQQRFGFFLTPFGYGAPPHGGFA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            GIDR+V +L G  N+REV  FP +Q+  D + G+P+TV   QLRELG+R+V  P
Sbjct: 538 FGIDRLVAILAGEDNIREVIAFPKTQSGLDPMTGAPTTVDERQLRELGIRVVAPP 592


>gi|209528217|ref|ZP_03276684.1| aspartyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209491339|gb|EDZ91727.1| aspartyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 518

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 215/525 (40%), Positives = 308/525 (58%), Gaps = 29/525 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ CG L   ++G  V L GWV R R HGG++FLD+RD  G+ Q++++P+     + ++
Sbjct: 2   RTYYCGHLRSVNIGETVTLCGWVDRYRDHGGVVFLDLRDRSGLVQIISDPERTPNSYSLS 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+VL I G V  R  E+IN  I  G IE+ A +IEIL+   + PLP        E
Sbjct: 62  TSVRNEYVLRITGRVSQRPEESINPKIPGGDIEVYADEIEILNGLGK-PLPFLVSSNDTE 120

Query: 123 SIR----FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEG 176
           S+R     KYR+LDLRR+ + +N+  R  +I +MR R +   E+FIE  TPILT S+PEG
Sbjct: 121 SVREELRLKYRYLDLRRERMTRNLQLRHEVIKAMR-RFLEDQEHFIEVETPILTRSTPEG 179

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSRVN G ++ALPQ+PQ +KQ+LM SGFDRY+QIA CFRDED R+DR P EF Q
Sbjct: 180 ARDYLVPSRVNPGEWFALPQSPQLFKQMLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQ 238

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEMSF+ Q+++L   EN++  +F+   N + +   F R+ Y +A+ RYG+DKPD R  
Sbjct: 239 LDMEMSFMSQEEVLALNENLVCHIFKTVKNID-LPRPFPRMTYSEAMERYGSDKPDTRFG 297

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-------RMNEWAR 349
           + + +V++    S F+VFS  +      ++  IP    GGN    +        + + A 
Sbjct: 298 LELADVSDLLKDSGFKVFSAAIKSGGIVKILPIP----GGNDLISNVQIKPGGDLFKEAT 353

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
             G  GLAYI  R+   G +  +G +  +L+      I  R + + GD   F AGD    
Sbjct: 354 EAGAKGLAYI--RVKADGQIDTIGAIKDNLSDDQKAEILQRTNAKAGDLLLFGAGDVATV 411

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
                  R  I   LG+I+ N     W+ DFP +EWN++EK+++  H+PFT P       
Sbjct: 412 NKTLDRLRLVIGNRLGLIDPNQINLLWVTDFPMFEWNQDEKRLEAIHHPFTSPHPD---- 467

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             NDL + +A  YDLV NG EI  G +R +  E+  + F  +G+S
Sbjct: 468 DINDLKTARAQAYDLVLNGTEIGGGSLRIYQREIQEKVFDAIGLS 512


>gi|327403473|ref|YP_004344311.1| aspartyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327318981|gb|AEA43473.1| aspartyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 585

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 210/596 (35%), Positives = 331/596 (55%), Gaps = 20/596 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDS------ 56
           YR+H+ G+L  S +G  V L+GWV   R     ++F+D+RD YGITQ+    DS      
Sbjct: 2   YRSHTNGELRASHIGQEVTLAGWVQANRKISANLLFVDLRDRYGITQLNFTDDSTSDVEN 61

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           +    A  +  E+V+ + G V+ RS++  N NI TG+IE+   ++ +L+ A+  P  +  
Sbjct: 62  SLISRASKLGREFVIQVKGTVIERSSK--NDNIPTGEIEIKVSELLVLNAAKTPPFTIED 119

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           + +  E +R +YR+LDLRR+ + + +  R  +    R  + ++ F++  TP L  S+PEG
Sbjct: 120 DTDGGEELRAQYRYLDLRRNPVQQKLRLRNHVALETRKFLDSKGFLDVETPYLIKSTPEG 179

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VPSR+NQG FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q
Sbjct: 180 ARDFVVPSRMNQGEFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQ 238

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +D EM+FVEQ+DILN  E +++ +F+    G T   +F R+ Y +A+ +YG+DKPD+R  
Sbjct: 239 IDCEMAFVEQEDILNMFEGLIKHLFQTV-RGITFEGDFPRMTYAEAMEKYGSDKPDIRFG 297

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPG 355
           +   ++        F +F    +      V  I   G     R   D + +W +      
Sbjct: 298 MEFTDLKTLSAGKGFSIFDNAEA------VIGIAVPGASEYTRKQLDEITDWVKRPQIGA 351

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L  I+ + +  G       V K  +    +        + GD  F ++G+  K      +
Sbjct: 352 LGLIYVKCNADGTFK--SSVDKFYDEAALKTWAEASGAKAGDLIFVLSGELDKTRKQMNE 409

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  +  ELG+   + F+  W++DFP  EW+E   +    H+PFT P+    SL   +  
Sbjct: 410 LRLRMGTELGLRKPDDFKPLWVLDFPLLEWDENSGRYHAMHHPFTSPKPEDFSLIDTEPG 469

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            ++A  YDL  NG E+  G IR H   +  + F  +G + E  + +FG L  AF+ G PP
Sbjct: 470 KVRANAYDLAMNGVELGGGSIRIHDRALQSRMFELLGFTPEQAQEQFGFLLNAFEYGAPP 529

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG+A G+DR+V  + G+ ++R+   FP + +  D+++ +PS +   QL+ELG+++
Sbjct: 530 HGGLAFGLDRLVATMGGSDSIRDYIAFPKNNSGRDVMIDAPSVIDEAQLKELGIKL 585


>gi|15616925|ref|NP_240138.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134956|sp|P57401|SYD_BUCAI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|25293054|pir||H84966 aspartate-tRNA ligase (EC 6.1.1.12) [imported] - Buchnera sp.
           (strain APS)
 gi|10038990|dbj|BAB13024.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 586

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 222/591 (37%), Positives = 336/591 (56%), Gaps = 15/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           RT  CG++ +S V   V+L GWVH+VR  G  IF+D+RD+ G+ QV+    +   F+ A 
Sbjct: 2   RTKYCGNIRISHVNKKVKLCGWVHKVRNLGQFIFVDMRDYTGLVQVIFELKNYKIFKKAL 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R  +  N  I TG+IE+ A  + IL+ ++ LPL     +E  + 
Sbjct: 62  NLRNEFCIQVFGTVQKREKKNQNIKIRTGEIEILANVLNILNTSKSLPLNF--TQENNDD 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLR   + +N+  R +I   +R  M  +NF++  TPILT S+PEGARD+LVP
Sbjct: 120 SRLKYRYLDLRSFDILENLKIRNKITYLIRNFMTKKNFLDIETPILTKSTPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G FYALPQ+PQ +KQ+LM SG DRY+QI  CFRDED RSDR P EF Q+D+E+SF
Sbjct: 180 SRNHYGKFYALPQSPQLFKQILMISGIDRYYQIVKCFRDEDLRSDRQP-EFTQIDIEVSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    I N +EN+++ ++ E  N N     F +I + +A+++YG+DKPDLRNPI + +V+
Sbjct: 239 MSAKKIRNLVENLIKKLWLEIRNINL--KKFPQISFHEAMKKYGSDKPDLRNPIEIIDVS 296

Query: 304 EHFVHSEFRVFSKILSVNPGYE---VWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
             F   +F  F    ++NP           +KG   +R   D   ++ +      L Y+ 
Sbjct: 297 NIFKDKKFISF---FNLNPQKNNRIALLCISKGAHLSRKKIDDYTKYVQRFDAKKLFYMK 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +  + G +     +   L+ +  + I  +   ++GD  F IA             R  I
Sbjct: 354 IKECKLGCLGIHSSIKNILDEIILKEIIEKSQSKNGDILFLIADQEHIVNKSLGMLRLKI 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
             +L I   N +E  WI++FP ++  + +  +   H+PFT  +    E LK +  L+I +
Sbjct: 414 GIDLNITKKNRWEPLWIVNFPMFD-KDIQGNLSSVHHPFTAVKNMDREILKNSPDLAI-S 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDL+ NG+EI  G +R H   +  Q F  +GI K +   +FG L  A + G PPH GI
Sbjct: 472 DSYDLIINGYEIGGGSVRIHDVNMQKQVFDIIGIKKSMQNEKFGFLIEALKYGAPPHAGI 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           A G+DRIVMLL  +KN+R+V  FP + +   L+  SPSTV    L+EL ++
Sbjct: 532 ALGLDRIVMLLTNSKNIRDVIAFPKTTSATCLMTNSPSTVDNLLLQELAIK 582


>gi|270291328|ref|ZP_06197550.1| aspartyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304385080|ref|ZP_07367426.1| aspartate--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|270280174|gb|EFA26010.1| aspartyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304329274|gb|EFL96494.1| aspartate--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 593

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 212/598 (35%), Positives = 337/598 (56%), Gaps = 12/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSA-CFEIA 62
           RT   G +    +   V L GWV + R  G +IF+D+RD  GI Q+V +N  SA    +A
Sbjct: 3   RTTYAGLVDQQYLDQTVTLKGWVQKRRNLGQLIFIDLRDREGIVQLVFSNEFSADALAVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+V+ + G+V  R  + +N  + TG+IE+   + +IL+ A+  P  +       +
Sbjct: 63  DQLRSEYVIEVTGVVKQRKPKDVNPKMKTGEIEVEVHEAKILNKAKTPPFDIEDGVNASD 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++ KYR+LDLRR  + K +  R RI  ++   +  + F++  TP LT S+PEGARD+LV
Sbjct: 123 ELKMKYRYLDLRRPEMLKGLKIRNRITQAVHSYLDEQGFLDIETPDLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLM +G DRY+Q+A CFRDED R DR P EF Q+D+E S
Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMGAGIDRYYQLARCFRDEDLRGDRQP-EFTQIDLETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I +  E ++  V ++  + + V   F RI + +++ R+GTD+PD+R  + + ++
Sbjct: 242 FLTAEEIQDITEGLIARVMKDTLDID-VKLPFDRISWQESMDRFGTDQPDVRFGMELKDI 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E    SEF+VFS  ++     +  A+P      +R   D++ ++    G  GLA++  +
Sbjct: 301 SEIVADSEFKVFSGAVANGGVVKAIAVPDGAAKLSRKEIDKLAKYVERFGAKGLAWL--K 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + + G     GPVAK  +    + I  + D + GD   F A             R  +A+
Sbjct: 359 ITDQGF---SGPVAKFFDEATEKQIMAKTDAKVGDLLLFAADRKKVVADTLGYLRVELAK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL-KGNDLLSIKAF 480
              +I+ + F F W++D+P +E++E +++   AH+PFTMP +  +  L +G D     A 
Sbjct: 416 RFDLIDEDQFAFLWVVDWPLFEYDEGDERWVAAHHPFTMPNEEDLHYLDEGEDPHKAHAQ 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD++ NG E+  G IR +  EV  +    +G + E   ++FG L  A   G PPHGG+A
Sbjct: 476 SYDIILNGLELGGGSIRINTREVQEKMLKALGFTLEKANDQFGYLLTALDYGFPPHGGLA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597
            G+DR   LL    N+R+V  FP +    + +  +P+ VS EQL EL L + +  P+K
Sbjct: 536 IGLDRFARLLAKRDNIRDVIAFPKNSKASEPMTEAPTPVSEEQLAELSLDVDIRKPEK 593


>gi|311087210|gb|ADP67290.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 586

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 222/591 (37%), Positives = 335/591 (56%), Gaps = 15/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           RT  CG++ +S V   V+L GWVH+VR  G  IF+D+RD+ G+ QV+    +   F+ A 
Sbjct: 2   RTKYCGNIRISHVNKKVKLCGWVHKVRNLGQFIFVDMRDYTGLVQVIFELKNYTIFKKAL 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R  +  N  I TG+IE+ A  + IL+ ++ LPL     +E  + 
Sbjct: 62  NLRNEFCIQVFGTVQKREKKNQNIKIRTGEIEILANVLNILNTSKSLPLNF--TQENNDD 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLR   + +N+  R +I   +R  M  +NF++  TPILT S+PEGARD+LVP
Sbjct: 120 SRLKYRYLDLRSFDILENLKIRNKITYLIRNFMTKKNFLDIETPILTKSTPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G FYALPQ+PQ +KQ+LM SG DRY+QI  CFRDED RSDR P EF Q+D+E+SF
Sbjct: 180 SRNHYGKFYALPQSPQLFKQILMISGIDRYYQIVKCFRDEDLRSDRQP-EFTQIDIEVSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    I N +EN+++ ++ E    N     F +I + +A+++YG+DKPDLRNPI + +V+
Sbjct: 239 MSAKKIRNLVENLIKKLWLEIR--NITLKKFPQISFHEAMKKYGSDKPDLRNPIEIIDVS 296

Query: 304 EHFVHSEFRVFSKILSVNPGYE---VWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
             F   +F  F    ++NP           +KG   +R   D   ++ +      L YI 
Sbjct: 297 NIFKDKKFISF---FNLNPQKNNRIALLCISKGAHLSRKKIDDYTKYVQRFDAKKLFYIK 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +  + G +     +   L+ +  + I  +   ++GD  F IA             R  I
Sbjct: 354 IKECKLGCLGIHSSIKNILDEIILKEIIEKSQSKNGDILFLIADQEHIVNKSLGMLRLKI 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKA 479
             +L I   N +E  WI++FP ++  + +  +   H+PFT  +    E LK +  L+I +
Sbjct: 414 GIDLNITKKNRWEPLWIVNFPMFD-KDIQGNLSSVHHPFTAVKNMDREILKNSPDLAI-S 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDL+ NG+EI  G +R H   +  Q F  +GI K +   +FG L  A + G PPH GI
Sbjct: 472 DSYDLIINGYEIGGGSVRIHDVNMQKQVFDIIGIKKSMQNEKFGFLIEALKYGAPPHAGI 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           A G+DRIVMLL  +KN+R+V  FP + +   L+  SPSTV    L+EL ++
Sbjct: 532 ALGLDRIVMLLTNSKNIRDVIAFPKTTSATCLMTNSPSTVDNLLLQELAIK 582


>gi|325688127|gb|EGD30146.1| aspartate--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 578

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 203/583 (34%), Positives = 325/583 (55%), Gaps = 12/583 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N +I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++G  ++ +F  I YD+A+ R+G+DKPD R  + + N+T+    
Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEDFPTISYDEAMSRFGSDKPDTRFGLELKNLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           +E  +  K L          +P      ++       +  +  G    A +     + GN
Sbjct: 304 NESLLIKKALDSQEEVMGICVPDAASAFSKKQLSHYYQEMKEFGCSRFASL-----KVGN 358

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
              +G +A      + E +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 359 GQLVGDLASTFEAESQELLE-RFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT  QG  E   G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFED--GQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L +
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576


>gi|163840731|ref|YP_001625136.1| aspartyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162954207|gb|ABY23722.1| aspartyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 617

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 220/600 (36%), Positives = 325/600 (54%), Gaps = 31/600 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    +G  V L+GWV R R HGG+ FLD+RD  G+ Q+V   D   F    S
Sbjct: 22  RTHDLGSLNAELIGQTVTLTGWVARRRDHGGVAFLDLRDASGVAQIVVR-DEKDF---GS 77

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL + G V  R     N  + TG+IE+ A+ + +L+ +  LP  +    +  E  
Sbjct: 78  LRNEFVLQMTGSVERRPEGNENPALATGEIEVVAETVVVLNESAPLPFQIDEHGDVGEEA 137

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR  +  N+  R+ +    R  +  E F+E  TP +T S+P GARDF+VP+
Sbjct: 138 RLRHRYLDLRRAPMAHNLKLRSEVNRVARNLLHDEGFVEIETPTMTLSTPGGARDFVVPA 197

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G+ Y L Q+PQ +KQLL   GF++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 198 RLAPGNGYGLAQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 256

Query: 245 EQDDILNTMENVLRGVFE--EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           E++DIL   E ++  +++  +F     +     R+ Y +A+ R+G+DKPDLR    + ++
Sbjct: 257 EEEDILALGERIVSALWKLIDFE----IPLPIQRMPYWEAMARFGSDKPDLRFGQELTDL 312

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE+F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   
Sbjct: 313 TEYFKDTTFRVFQA------AYVGAVVMPCGASQPRRTLDGWQEWAKQRGAKGLAYVL-- 364

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G +   GPVAK+L+      +  ++  + GD  FF AG+     S     R  I  
Sbjct: 365 IQEDGEL--TGPVAKNLSEAEKAGLAEKVGAKPGDCVFFGAGERDDAWSILGATRVEIGH 422

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKI--------DFA--HNPFTMPQGGMESLKGN 472
             G+I+   F F WI+D P +E     K          D+   H+ FT P+         
Sbjct: 423 RTGLIDPKAFAFVWIVDAPMFESAAAAKASGDTTVGAGDWTALHHAFTSPKAEFMENFDQ 482

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D  +  A+ YD+VCNG EI  G IR H  ++  + F+ +G+ +   +  FG L   F+ G
Sbjct: 483 DPAAALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFALMGLDETQQQETFGFLLEGFKYG 542

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G DR V LL G +++R+V  FP S    D L G+P+ ++ +Q +E G+  V
Sbjct: 543 APPHGGIALGWDRTVALLAGVESIRDVIAFPKSGGGFDPLTGAPAPITPQQRKEAGIDAV 602


>gi|327461765|gb|EGF08096.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327489050|gb|EGF20845.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 578

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/583 (34%), Positives = 325/583 (55%), Gaps = 12/583 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N +I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++G  ++  F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++       +  +  G    A +     + GN
Sbjct: 304 NDSLLIKKALDNQEEVMGICVPDAASAFSKKQLSHFYQEMKELGCSRFASL-----KVGN 358

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
              +G +A      + E +  R + +DGD    +     +        R  +A+ L +IN
Sbjct: 359 GQLVGDLASTFEAESQELLE-RFEAKDGDLILLVMAKQRRAQEALGHLRIEVAKALNLIN 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT  QG  E  +G D    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFE--EGQDPAQFRSQAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSQEDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +L G +N+R+V  FP +    D +M SPS V   QL+EL L +
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMMESPSLVDQRQLKELHLEL 576


>gi|301057107|ref|ZP_07198247.1| aspartate--tRNA ligase [delta proteobacterium NaphS2]
 gi|300448788|gb|EFK12413.1| aspartate--tRNA ligase [delta proteobacterium NaphS2]
          Length = 727

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 224/610 (36%), Positives = 339/610 (55%), Gaps = 33/610 (5%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIAKSVR 66
           CG L  SD G  V L GWV  +R HG I+F  +RD  GI QV+ +P  +   ++ A  +R
Sbjct: 12  CGALTDSDAGRSVLLMGWVDAIRDHGNILFFHLRDISGIVQVIFDPQKEKDSYDTAALIR 71

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP------VFGER-- 118
            E+V+ + G V++R     N  + TG+IE+ A  +EILS ++ +P        VFGE   
Sbjct: 72  EEYVIEVHGRVIARDKTAENPALATGKIEVMANAVEILSKSKAVPFQISEKAMVFGEEIQ 131

Query: 119 ----EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                  E IR KYR+LDLRR ++    +KR +II  +R  +   NFIE  TP LT S+P
Sbjct: 132 TGPENVDEEIRLKYRYLDLRRPSVQDIFLKRYQIIKCIRDYLDTLNFIEIETPFLTRSTP 191

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EGARD+LVPSR++ G FYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R +R P EF
Sbjct: 192 EGARDYLVPSRIHHGKFYALPQSPQLFKQILMIGGMDRYFQIARCFRDEDLRPNRQP-EF 250

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            QLD+E SF++++ I  T+E +   +F     G ++S  F R+ Y+ A+ +YGTD+PDLR
Sbjct: 251 TQLDLEASFIDEEFIYETLEALTVQMFA--VGGISLSGPFPRMTYETAMNKYGTDRPDLR 308

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA-RSQGQ 353
             +   + T+ F  +++ +F +I  +  G ++         G  +     N++A R   +
Sbjct: 309 FKMAFEDTTDIFQDTQYAIFRQI--IEKGGQIRGFSVSDPEGVLSKNILQNDYAQRVVPR 366

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA---GDPLKFC 410
            G   + W     G +     + +  +    +A+  R   ++GD    IA   GD +K  
Sbjct: 367 FGAKGLTWMKVIDGKL--QSNIVQFFSANEQKALMNRFQAKNGDVFMMIADLSGDLVK-- 422

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESL 469
                 R H+A  L +I  + +   W+ DFP +E   ++ +I   H+PFTMP +   +  
Sbjct: 423 KVLGRLRIHVANRLNLIPLDQWRPLWVTDFPLFEL--KDGRISSQHHPFTMPDRTDFDPT 480

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
               LL++K+  YDLV NG E+  G IR H  +V  + FS +G+  +    +FG   +A 
Sbjct: 481 DTEALLTLKSRAYDLVMNGEELGGGSIRIHRMDVQEKIFSALGLDHQEAAAKFGFFLKAL 540

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRELG 588
           + G PPHGG+A G+DR++ ++L   ++R+V  FP ++  FC  L  +PS    +QL EL 
Sbjct: 541 EYGTPPHGGLALGLDRVIAMILKTPSIRDVIAFPKNRKAFCP-LTEAPSMADTKQLEELA 599

Query: 589 LRI-VENPKK 597
           L +  EN K+
Sbjct: 600 LNVPSENAKR 609


>gi|85858293|ref|YP_460495.1| bifunctional aspartyl-tRNA synthetase/aspartyl/glutamyl-tRNA
           amidotransferase subunit C [Syntrophus aciditrophicus
           SB]
 gi|97196491|sp|Q2LPW5|SYD1_SYNAS RecName: Full=Aspartyl-tRNA synthetase 1; AltName:
           Full=Aspartate--tRNA ligase 1; Short=AspRS 1
 gi|85721384|gb|ABC76327.1| aspartyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 723

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 223/601 (37%), Positives = 338/601 (56%), Gaps = 31/601 (5%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSV 65
           CG L     G  V L+GWV   R HGG++F+ +RD  GI Q+V +P++A  ++   A S+
Sbjct: 26  CGHLTPDHTGRRVLLAGWVDAFRDHGGLLFIHLRDRNGIIQIVFSPEAASADVYRQAASL 85

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----------- 114
           R+E+ + + G V  R   T N +I TG IE+   ++ +LS +E LP  +           
Sbjct: 86  RAEYCVAVQGEVRKRLPGTENPHIETGDIEVFVSELTVLSESEALPFAISDKAMVAGASS 145

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
            G     E +R +YR+LD+RR  + KN++ R RI   +R  + +  F+E  TP+LT S+P
Sbjct: 146 AGADHVNEDLRMQYRYLDIRRPAMQKNLILRHRISQCVREFLDSRGFVEVETPVLTMSTP 205

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EGARD+LVPSR++  SFYALPQ+PQ +KQLLM  G +RYFQ+A CFRDED R +R P EF
Sbjct: 206 EGARDYLVPSRIHPRSFYALPQSPQLFKQLLMIGGMERYFQLARCFRDEDLRPNRQP-EF 264

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            QLD+E SF++++ +   +E +   +F     G  +S  F R+ Y +A+   G+D+PDLR
Sbjct: 265 TQLDIEASFIDEEFLYELIEELTVRMFA--IGGIALSRPFPRMTYAEAMDTTGSDRPDLR 322

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354
             + M +VT  F  + + +F +IL    G  +  I  KG     +     NE+A+     
Sbjct: 323 FGLRMADVTGVFSRTSYSIFKQIL--QRGGSIKGINIKGQSEKLSKNVLQNEYAKEIAPS 380

Query: 355 -GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            G   + W   E G +     + +  +    EA++    ++DGD    +A DP   C+  
Sbjct: 381 FGAKGMTWMRAEEGKLESN--IVQFFSADELEALKRVFQVEDGDVLIMVA-DP--SCAIV 435

Query: 414 ADA----RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMES 468
             A    R H+   LG+I    F   WI +FP +E   +E  +  +H+PFT P +   + 
Sbjct: 436 NSALGQLRLHLGNRLGLIPEGVFYPVWITEFPLFEPT-DEGGVTSSHHPFTAPDRTDFDP 494

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
               +LLS+++  YDLV NG E+  G IR +  EV  + F+ +G+++E V+N+FG   RA
Sbjct: 495 GNIEELLSLRSRAYDLVVNGEELGGGSIRINDREVQRRIFAALGLTEEDVKNKFGFFLRA 554

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           F    PPHGG+A G+DR+V ++L   ++REV  FP +++    L G+PS V  EQL ELG
Sbjct: 555 FDFAAPPHGGLALGMDRVVSMILQTPSIREVIAFPKNRSAACPLTGAPSEVKREQLAELG 614

Query: 589 L 589
           L
Sbjct: 615 L 615


>gi|212551115|ref|YP_002309432.1| aspartyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|229470554|sp|B6YS49|SYD_AZOPC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|212549353|dbj|BAG84021.1| aspartyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 583

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 218/595 (36%), Positives = 339/595 (56%), Gaps = 21/595 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           YRT++CG+L + +    V L GWV + R   GI+F+D+RD YGITQ++ N   + A +  
Sbjct: 2   YRTNTCGELRIVNENQEVILCGWVQKSRRMSGIVFVDLRDRYGITQLIFNKKVNLALYNK 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  EWV+ I+G V+ R  +  N++I TG IE+   ++  L+ +E  P  +    +  
Sbjct: 62  ALELGREWVIQIEGKVVKRFNK--NSDIPTGDIEIIVSRLRTLNPSEVPPFTIEENTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  +  N+  R +++ ++R  + +  F+E  TP+L  S+PEGARDF+
Sbjct: 120 DDLRMKYRYLDLRRTLIRSNLELRHQMVFAIRNYLNSHEFMEVETPVLINSTPEGARDFI 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FY+LPQ+PQ +KQLLM +GFDRYFQ+  CFRDED R+DR P EF Q+D EM
Sbjct: 180 VPSRMNMGEFYSLPQSPQLFKQLLMIAGFDRYFQVVKCFRDEDLRTDRQP-EFTQVDCEM 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DIL+  E + + +F+     +   + F R+ Y DAIR YG+DKPD+R  + +  
Sbjct: 239 SFVEQEDILSIFEGLTKHLFKTIKGLDI--SGFSRLSYADAIRFYGSDKPDIRFGMQLVE 296

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQ--GQPGLAY 358
           + +  +   F VF      +    V AI A+G     R   D + ++ +    G  GL Y
Sbjct: 297 IKDITIGRGFDVF------DESEYVGAICAEGCAFYTRKQLDELTDFVKHPQIGAAGLIY 350

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           + +  D S   +    V K  + V+ +    R+  + GD    + G+  +     +  R 
Sbjct: 351 VRYSFDGSLKSS----VDKFYSTVDLQKWIDRVGAKQGDLVLILYGEKRETQKQLSRLRL 406

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +   LG+ +   F   W++DFP +E++    +    H+PFT P+     L   +   ++
Sbjct: 407 EMGSRLGLRDKKQFGCLWVIDFPLFEYDNVLNRFFAKHHPFTSPKQEDVCLLETNPEFVR 466

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  +D+V NG EI  G IR H  E+  + F+ +G S+   +++FG    AF+ G PPHGG
Sbjct: 467 ANAFDMVINGIEIGGGSIRIHNYELQKKIFALLGFSESYTQSQFGFFVDAFKYGAPPHGG 526

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           IA G+DR V    G  ++R+   FP + +  D ++G+PS +S E+L EL L IVE
Sbjct: 527 IALGLDRFVATFAGLDSIRDCIAFPKNNSGRDTMVGAPSIISRERLSELNL-IVE 580


>gi|304415265|ref|ZP_07395962.1| aspartyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304282891|gb|EFL91357.1| aspartyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 640

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 219/591 (37%), Positives = 323/591 (54%), Gaps = 12/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L  S V   V L GW +R R  G  IF+D+RD  GI QV  + D S   + AK
Sbjct: 2   RTKYCGRLNFSHVNQEVTLCGWANRCRDLGRSIFIDVRDREGIVQVFFDQDQSLALDEAK 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G+V +R  + IN ++ TG++E+ A K+ I++ +   PLP+       E 
Sbjct: 62  KLRNEFCIQITGIVRARDEDKINHDMPTGEVEVFATKLTIINASA--PLPLDNNHINSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I   +R  M  + F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMAQRLKTRAKITALVRRFMENQGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+QG FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED RSDR P EF Q       
Sbjct: 180 SRVHQGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRSDRQP-EFTQXXXXXXX 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
                + + ME ++  +++E    +     F  + +DDAIRR+G+DKPDLRNP+ + ++ 
Sbjct: 239 XXXKQLRDLMEQLICKLWKEIKGVDL--GTFQILSFDDAIRRFGSDKPDLRNPLELIDIA 296

Query: 304 EHFVHSEFRVFSKILSVNP---GYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +     E  +F+ +L+ N    G  V     +G    R   D   E  + +G  GL  + 
Sbjct: 297 DLVQGIELPIFADVLNPNSNITGRVVAICVTEGAQIGRKQIDEYTETIKQRGVNGLVCLK 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               ++G     G + K LN      I  R    +GD  F  AG            R  +
Sbjct: 357 VNDSQAGVAGVQGSIGKFLNADMLRNILQRTQANNGDMLFLAAGSFNTVTEAMGALRLQL 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKA 479
             +  +I  N ++  W++DFP +E N ++  +   H+PFT P+    + LK N   +I A
Sbjct: 417 GHDRKLIQPNSWQPLWLVDFPLFEKN-DQGGLSAMHHPFTSPKEMTSAELKANPTAAI-A 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H SE+  Q FS +GI +     +FG L  A + G PPH G+
Sbjct: 475 NAYDMVINGYEVGGGSVRIHCSEMQQQVFSLLGIEEAEQREKFGFLLDALKYGAPPHAGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           A G+DR+VMLL    N+R+V  FP +     L+  +PS  + + L EL ++
Sbjct: 535 AFGLDRLVMLLTDCDNIRDVIAFPKTTAAACLMTEAPSFANPDVLAELSIK 585


>gi|218131086|ref|ZP_03459890.1| hypothetical protein BACEGG_02691 [Bacteroides eggerthii DSM 20697]
 gi|217986790|gb|EEC53123.1| hypothetical protein BACEGG_02691 [Bacteroides eggerthii DSM 20697]
          Length = 555

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 216/564 (38%), Positives = 324/564 (57%), Gaps = 17/564 (3%)

Query: 34  GGIIFLDIRDHYGITQVVANP--DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT 91
           GG+ F+D+RD YGITQ+V N   D+   E A  +  E+V+ I G V  R ++  N NI T
Sbjct: 2   GGMTFIDLRDRYGITQLVFNEEVDAELCEQANHLGREFVIQIVGTVNERFSK--NKNIPT 59

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
           G IE+   ++ +L+ A   P  +    +  + IR KYR+LDLRR T+ KN+  R ++   
Sbjct: 60  GDIEIIVSELNVLNSALTPPFTIEDNTDGGDDIRMKYRYLDLRRATVRKNLELRHKMTIE 119

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
           +R  + ++ FIE  TP+L  S+PEGARDF+VPSR+N G FYALPQ+PQ  KQLLM SGFD
Sbjct: 120 VRKYLDSKGFIEVETPLLIGSTPEGARDFVVPSRMNPGQFYALPQSPQTLKQLLMVSGFD 179

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           RYFQIA CFRDED R+DR P EF Q+D EMSFV+QDD++   E + + +F+E   G  ++
Sbjct: 180 RYFQIAKCFRDEDLRADRQP-EFTQIDCEMSFVQQDDVIELFEGMAKYLFKEI-RGVELT 237

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
             F R+ + +A++ YG+DKPDLR  +    + +      F VF      N  Y +  I A
Sbjct: 238 EPFQRMPWANAMKYYGSDKPDLRFGMKFVELMDIMKGHGFSVFD-----NAAY-IGGICA 291

Query: 332 KGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR 390
           +G     R   D + E+ +         ++ R++  G V     V K       + ++  
Sbjct: 292 EGAASYTRKQLDALTEFVKKPQIGAKGMVYARVEADGTVK--SSVDKFYTQEVLQEMKAA 349

Query: 391 LDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE 449
              + GD    ++G D +K      + R  +  +LG+ + N F   WI+DFP +EW+EEE
Sbjct: 350 FGAKPGDLILILSGDDAMKTRKQLNELRLEMGNQLGLRDKNKFALLWIVDFPMFEWSEEE 409

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
            ++   H+PFT P+     L   +  +++A  YD+VCNG E+  G IR H +++  + F 
Sbjct: 410 GRLMAMHHPFTHPKDEDIPLLDTNPAAVRADAYDMVCNGIEVGGGSIRIHDAQLQAKMFE 469

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G + E  E +FG L  AF+ G PPHGG+A G+DR V +  G  ++R+   FP + +  
Sbjct: 470 ILGFTPEKAEEQFGFLMNAFKFGAPPHGGLAYGLDRWVSIFAGLDSIRDCIAFPKNNSGR 529

Query: 570 DLLMGSPSTVSVEQLRELGLRIVE 593
           D+++ +PS +  +QL EL L IVE
Sbjct: 530 DVMLDAPSAIDQKQLDELNL-IVE 552


>gi|324993494|gb|EGC25414.1| aspartate--tRNA ligase [Streptococcus sanguinis SK405]
          Length = 578

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 205/583 (35%), Positives = 324/583 (55%), Gaps = 12/583 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N +I +GQ+EL A+KIEI++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEIIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++G  ++ +F  I Y++A+ R+G+DKPD R  + + N+T+    
Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEDFPTISYEEAMSRFGSDKPDTRFGLELKNLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          IP      ++       +  +  G    A +     + GN
Sbjct: 304 NDSLLIKKALDNQEEVMGICIPDAASAFSKKQLSHYYQEMKEFGCSRFASL-----KVGN 358

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
              +G +A      + E +  R + +DGD    +     +        R  +A+ L +IN
Sbjct: 359 GQLVGDLASTFEAESQELLE-RFEAKDGDLILLVMAKQRRAQEALGHLRIEVAKALNLIN 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT  QG  E   G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFED--GQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHNRKAQEAMFELLGMSWEDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +L G +N+R+V  FP +    D +M SPS V   QL+EL L +
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMMESPSLVDQRQLKELHLEL 576


>gi|159473655|ref|XP_001694949.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii]
 gi|158276328|gb|EDP02101.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii]
          Length = 605

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 217/602 (36%), Positives = 340/602 (56%), Gaps = 16/602 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H CG +  +D+GS V + GWV R R  GG+ F D+RDH G+ QV+  P S   E++++
Sbjct: 10  RSHGCGAVTTADIGSKVTICGWVDRNRDMGGVQFFDVRDHSGLLQVICEPQSVAPEVSRT 69

Query: 65  ---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPV--FGER 118
              +R+E+V+C+ G++ +R  +  N  I TGQ+E+ A+ ++IL+V    LP P+    E+
Sbjct: 70  ASRLRNEYVVCVKGVLRAR--KDPNPKIPTGQLEVLAESVDILNVVTRSLPFPISEAEEQ 127

Query: 119 EYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEG 176
           E P E  R K R LDLRR  +  N+  R +++  +R  +   + F+E  TPILT S+PEG
Sbjct: 128 EPPKEDTRLKNRVLDLRRPKMAANLRLRHKLLRLIRTFLEDRHGFMEVETPILTRSTPEG 187

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSRV  G +YALPQ+PQ +KQ+LM +G DRY+QIA CFRDED R+DR P EF Q
Sbjct: 188 ARDYLVPSRVQPGEWYALPQSPQLFKQMLMVAGMDRYYQIARCFRDEDLRADRQP-EFTQ 246

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+E+SF++   + + ME ++  VF++   G T++  F RI Y +A+ +YG+DKPDLR  
Sbjct: 247 LDIEVSFMDDKALQSLMEELVLQVFDQIL-GVTLAAPFRRISYAEAMDKYGSDKPDLRYG 305

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           +   +V+       F+VF+  ++     +   +P      N     + +    +      
Sbjct: 306 LEFVDVSPAVAGCGFKVFAGAVADGGVVKAIRVPDGKRISNTRIKPKGDIANEAVAAGAA 365

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD- 415
                R+   G++     + + L+      +      Q GD     AG P      A D 
Sbjct: 366 GLASIRVAADGSLDAAKAIKEGLSPEQAAQLMAATGAQPGDLLLLAAG-PRDTVHRALDR 424

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  + ++LG+I        W++DFP +E+N EE +    H+PFT P+   +     D +
Sbjct: 425 VRQLLGRDLGLIKPGDHSLLWVVDFPMFEFNPEEGRYQAIHHPFTAPRP--DDWASGDYV 482

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NG EI  G +R +  ++  + F  +G++    +++FG L   F+ G PP
Sbjct: 483 NARALAYDLVYNGVEIGGGSLRIYRRDIQQKVFELIGLTPAEAQSKFGYLLDCFEYGAPP 542

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGG+A G+DR+ MLL GA ++R+V  FP +      L G+P+ V+ +QL EL +     P
Sbjct: 543 HGGLAFGLDRLAMLLAGAPSIRDVIAFPKTTQAQCALTGAPAAVADKQLVELSIASTAPP 602

Query: 596 KK 597
           K+
Sbjct: 603 KQ 604


>gi|301167876|emb|CBW27461.1| aspartyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 596

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 216/593 (36%), Positives = 325/593 (54%), Gaps = 22/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L    VG  V L GWV++ R  G + F+DIRD YG+TQ+     +    I K 
Sbjct: 9   RTHNCGELREEHVGQTVTLCGWVNKYRDLGALHFIDIRDKYGLTQLGFEAFTGDLAILKD 68

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV--AEELPLPVFGEREYPE 122
              E V+ + G V  R     N  + TG +E+  ++IE+LS    + +P   FG+ E  E
Sbjct: 69  CALESVIKVTGEVAKRPEAAQNKKMDTGLVEVQVKEIEVLSRNDIDNIPFLPFGQIEATE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++ KYR+L+LR   L   +  R++  N++R  +  + FIE  TPIL  S+PEGARD++V
Sbjct: 129 DLKLKYRYLELRTKKLQDILALRSKATNTVRRILQEQKFIEVETPILYKSTPEGARDYVV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G  YALPQ+PQ  KQLLM    D+YFQI  CFRDED R+DR P EF Q+DME+S
Sbjct: 189 PSRVHPGKVYALPQSPQTLKQLLMIGSTDKYFQICRCFRDEDLRADRQP-EFTQIDMEIS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   + I N +E +L  +F +  +G T+      + Y++A+ R+G+DKPDLR  +    V
Sbjct: 248 FATPEYIKNLVEKILGELF-DLEDGFTLP----MMSYNEALARFGSDKPDLRFGLEHRIV 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T  F  S+F VFS +   N   +   +P   G  +R   D + E  +  G  G+A+    
Sbjct: 303 TNIFKDSDFSVFSSVAGANGLIKAIFVPEAMGSFSRKDTDALTEVVKPHGGKGVAFFKVS 362

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
            +E       G ++K +     +A+    +     +  F A          ADA R H+ 
Sbjct: 363 GEER-----TGGISKFITDEIYQALVATGEESGNGTWLFCADADHDTTHGCADALRRHLG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-------KGNDL 474
           ++L II  + ++F W+ DFP  EWN ++K+    H+PFTM     +             L
Sbjct: 418 KKLDIIE-DGYKFLWVYDFPLLEWNPDDKRYIARHHPFTMINVDQKDTFIAADPKDSESL 476

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             + A  YD+VCNG+E+  G IR H   +  + F  +G+ +E ++++FG    A + G+P
Sbjct: 477 KDMPAQAYDVVCNGYELGGGSIRIHEQPIQKKMFEVLGMGEEEIQSQFGFFVEALKYGVP 536

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           PHGG+A G+DRI+MLL    ++R+V  FP + +  DL+  +PS  +  QL EL
Sbjct: 537 PHGGLAFGLDRIIMLLAKTDSIRDVIAFPKTTSASDLMSKAPSVPAQAQLDEL 589


>gi|322386761|ref|ZP_08060385.1| aspartate--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269043|gb|EFX51979.1| aspartate--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 578

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 200/583 (34%), Positives = 330/583 (56%), Gaps = 12/583 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    D   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGDIEDFARLEEIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R A  +N  I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREARFVNKAIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++G  ++  F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQE 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++    +++ + +   + G + +     E G 
Sbjct: 304 NDSLLIKKALDSQEEVMGICVPDAASAFSKK---QLSHFYQEMKEFGCSRLVSLKVEDGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +G +A       ++ ++ R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 L--VGDLASTFE-AESQDLQARFEAKDGDLILLVMAKKRRAQEALGHLRLEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT  QG  E  +G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFE--EGQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEMMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L +
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576


>gi|323353267|ref|ZP_08087800.1| aspartate--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322121213|gb|EFX92976.1| aspartate--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 578

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/583 (34%), Positives = 325/583 (55%), Gaps = 12/583 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N +I +GQ+EL A+KIEI++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEIIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++G  ++ +F  I Y++A+ R+G+DKPD R  + + N+T+    
Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEDFPTISYEEAMSRFGSDKPDTRFGLELKNLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          IP      ++       +  +  G    A +     + GN
Sbjct: 304 NDSLLIKKALDNQEEVMGICIPDAASAFSKKQLSHYYQEMKEFGCSRFASL-----KVGN 358

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
              +G +A      + E +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 359 GQLVGDLASTFEAESQELLE-RFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT  QG  E   G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFED--GQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L +
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576


>gi|332533784|ref|ZP_08409640.1| aspartyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332036715|gb|EGI73178.1| aspartyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 592

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 219/594 (36%), Positives = 337/594 (56%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CG L  + V   V L GW+++ R  GG+IF+D+RD  G+ QVV + D       A 
Sbjct: 2   RSIYCGQLNKTHVDQEVELCGWINKRRDLGGLIFVDLRDREGLVQVVFDSDIEELMSSAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R E+ + + G V +R    +N ++ TG+IE+   ++ I++ +E  PLP+   +   E 
Sbjct: 62  TLRQEFCVQLKGTVRARPDSQVNKDMATGEIEVLGTELTIINRSE--PLPLDFNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R KYR+LDLRR  +   I  R +  + +R R + EN F++  TP+LT ++PEGARD+LV
Sbjct: 120 RRLKYRYLDLRRLEMSDRIKLRAKASSFVR-RFLDENGFLDIETPVLTKATPEGARDYLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E S
Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  D +    E ++R +++   N +    +F  + Y +A+  YG+DKPDLRNP+ + +V
Sbjct: 238 FMSSDQVRGMTEKMIREMWQTLLNVDL--GDFPIMPYSEAMSLYGSDKPDLRNPMKLVDV 295

Query: 303 TEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF VFS   +   G   V  +P  G   +R   D   ++    G  G+A++  
Sbjct: 296 ADLVKDVEFNVFSGPANDEKGRVAVLTVPG-GAKLSRKQLDDYTKFIGIYGAKGMAWMKV 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
               +G      PVAK L+      +  R + Q GD   F A             R  I 
Sbjct: 355 NDHTAGAEGVQSPVAKFLSEDVITKLLERTNAQSGDIILFGADKRNTVNEAMGALRVKIG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480
            +L I N + +   W++DFP +E  ++E  +   H+PFT P+    S L+ N   +I + 
Sbjct: 415 VDLEITNLDSWAPLWVVDFPMFE-EDDEGTLHAVHHPFTAPKDITASELEANPAAAI-SD 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +++   AF  +GI+++  +++FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNADMQETAFRILGINEQEQQDKFGFLLDALKYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+ MLL G  N+R+V  FP +     LL  +PS  +++ L EL + +VE 
Sbjct: 533 FGLDRLAMLLCGTDNIRDVIAFPKTTQASCLLTNAPSKPNMDSLAELAISVVEK 586


>gi|254496361|ref|ZP_05109245.1| aspartyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254354415|gb|EET13066.1| aspartyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 546

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/548 (37%), Positives = 322/548 (58%), Gaps = 12/548 (2%)

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           + A F  A+ +RSE+V+ + G+V SR    INA + TG++E+   K+EIL+ +   P P 
Sbjct: 6   NQAIFSDAEKLRSEFVVRVTGVVRSRPEGMINATMATGKVEVVGTKLEILNQS---PTPP 62

Query: 115 FGEREYP---ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
           F   ++    E +R+KYR++DLRR ++   +  R ++ + +R  +  ++F++  TP+LT 
Sbjct: 63  FLPDDFQTVNEDLRYKYRYIDLRRPSMQSKLRLRHKLNSCIRNYLNQQDFVDIETPMLTK 122

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++PEGARD+LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P
Sbjct: 123 ATPEGARDYLVPSRVHPGEFYALPQSPQLFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP 182

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF QLD+EM+F+++++ILN +E +L+ +F E  N  T+     R+ Y +A+RR+G+DKP
Sbjct: 183 -EFTQLDIEMAFIDEENILNLIEGLLKKIFSELMNV-TLPEKLPRMAYAEAMRRFGSDKP 240

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           D+RNP+ + +V +     +F+VFS   + +    V      G   +R   D    +    
Sbjct: 241 DMRNPLELIDVADLVKECDFKVFSTAANDDESRVVALKLPNGCDLSRKDLDDYGRFVSIY 300

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLAYI      +G      P+ K L+    +AI  R++   GD  FF A        
Sbjct: 301 GAKGLAYIKVNDRATGMDGLQSPILKFLSEDAVQAILDRVEAATGDVIFFGADKTHIVNE 360

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLK 470
                R  +  +  +++   +E  WI+D+P +E +++  ++   H+PFT P Q   ++L 
Sbjct: 361 SIGALRIKLGHDKKLLS-EGWELLWIVDWPMFEMDQQNNRLQAMHHPFTSPKQLSADALC 419

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            N   ++ A  YD+V NG+EI  G IR H S++    F  +GI+++  + +FG L  A Q
Sbjct: 420 ANPTHTL-AKAYDIVINGYEIGGGSIRIHQSDLQKAVFKLLGINEQEAQEKFGFLLDALQ 478

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA GIDR+ MLL  + ++R+V  FP +Q     L  +PS     QL ELG+R
Sbjct: 479 YGAPPHGGIALGIDRLAMLLTDSTSLRDVIAFPKTQTASCPLTNAPSPTGSAQLNELGIR 538

Query: 591 IV-ENPKK 597
           +   NP K
Sbjct: 539 LAPTNPTK 546


>gi|77360870|ref|YP_340445.1| aspartate tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|97196809|sp|Q3IIN7|SYD_PSEHT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|76875781|emb|CAI87002.1| aspartate tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 592

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 218/594 (36%), Positives = 335/594 (56%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CG L  + V   V L GW+++ R  GG+IF+D+RD  G+ QVV + D       A 
Sbjct: 2   RSIYCGQLNKTHVDQEVELCGWINKRRDLGGLIFVDLRDREGLVQVVFDSDIEELMSSAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R E+ + + G+V +R    +N ++ TG+IE+   ++ I++ +E  PLP+   +   E 
Sbjct: 62  TLRQEFCVQLKGIVRARPDSQVNKDMPTGEIEILGTELNIINRSE--PLPLDFNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
            R KYR+LDLRR  +   I  R +  + +R R + EN F++  TP+LT ++PEGARD+LV
Sbjct: 120 RRLKYRYLDLRRLEMSDRIKLRAKASSFVR-RFLDENGFLDIETPVLTKATPEGARDYLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E S
Sbjct: 179 PSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  D +    E ++R +++   N +    +F  + Y +A+  YG+DKPDLRNP+ + ++
Sbjct: 238 FMSSDQVRGMTEKMIREMWQTLLNVDL--GDFPIMPYSEAMSLYGSDKPDLRNPMKLVDI 295

Query: 303 TEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            +     EF VFS   +   G   V  +P  G   +R   D   ++    G  G+A++  
Sbjct: 296 ADLVKDVEFNVFSGPANDEKGRVAVLTVPG-GAKLSRKQLDDYTKFIGIYGAKGMAWMKV 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
               +G      PVAK L       +  R + Q GD   F A             R  I 
Sbjct: 355 NDHTAGAEGVQSPVAKFLTADVITQLLERTNAQSGDIILFGADKRNTVNEAMGALRVKIG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480
            +L I N + +   W++DFP +E  ++E  +   H+PFT P+    S L+ N   +I   
Sbjct: 415 IDLEITNLDSWAPLWVVDFPMFE-EDDEGTLHAVHHPFTAPKDMSASELEANPAAAISD- 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +++   AF  +GI+++  +++FG L  A + G PPH G+A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNADMQEAAFRILGINEQEQQDKFGFLLDALKYGTPPHAGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+ MLL G  N+R+V  FP +     LL  +PS  + + L EL + +VE 
Sbjct: 533 FGLDRLAMLLCGTDNIRDVIAFPKTTQASCLLTNAPSKPNADSLAELAISVVEK 586


>gi|332363919|gb|EGJ41698.1| aspartate--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 578

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/584 (34%), Positives = 330/584 (56%), Gaps = 14/584 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G V+ R    +N +I +GQIEL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DIIAVTGQVVQREERFVNKSIKSGQIELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ + +N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSR+ +
Sbjct: 126 RYLDLRREKMTQNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRIFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++G  ++ +F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEDFPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR-MNEWARSQGQPGLAYIFWRLDESG 367
           ++  +  K L          +P    G   AF  + ++ + +   + G +       E G
Sbjct: 304 NDSLLIKKALDNQEEVMGICVP----GATSAFSKKQLSHYYQEMKEFGCSRFASLKVEGG 359

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
            +  +G +A  L    ++ +  R + +DGD    +     +        R  +A+ L +I
Sbjct: 360 QL--IGDLASTLE-AESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIELAKALDLI 416

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
           + +   F W++D+P  EWNE++ +    H+PFT  QG  E   G +    ++  YD+  N
Sbjct: 417 DPSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFED--GQEPGQFRSHAYDIALN 472

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G+EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+V
Sbjct: 473 GYEIGGGSLRIHERKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLV 532

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           M+L G +N+R+V  FP +    D ++ SPS V   QL+EL L +
Sbjct: 533 MILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576


>gi|90408547|ref|ZP_01216704.1| aspartyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310366|gb|EAS38494.1| aspartyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 589

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 218/598 (36%), Positives = 345/598 (57%), Gaps = 15/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG++  + +G  ++L GW+++ R  GG+ FLD+RD  GI QV  + D+     IA 
Sbjct: 2   RTMYCGEVTEAVIGQEIKLVGWINKQRDLGGVTFLDLRDREGIVQVFFDGDTPEATLIAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+ + I G V +R    +N N+ TG +E+   +IEIL+ +E  PLP+   +   E 
Sbjct: 62  SVRNEYCIQIKGQVRARPDGQVNKNMRTGAVEICGIEIEILNRSE--PLPLDSNQNNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  + K +  R+++ + +R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 120 QRLRYRYLDLRRPEMAKRMQFRSKVSSFVRRFLEDNGFLDVETPILTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SG D+Y+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRTYKGQFFALPQSPQLFKQLLMMSGLDKYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D+++  ME ++  +F++  + +     F ++ Y +A+RR+G+DKPDLR    + +V 
Sbjct: 239 LSADEVMQKMEEMIVKLFQKMLDVDL--GTFPKMTYAEAMRRFGSDKPDLRIDFELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   + +    V  I   GG   +R   D   ++    G  GLA++   
Sbjct: 297 DLLTEVEFKVFSTPAN-DKDSRVAVICVPGGAALSRKQIDNYTKYVNIYGAKGLAWMKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
               G      PVAK L+    +A+  R   +DGD   F   D  K  S A  A R  +A
Sbjct: 356 EVSKGIDGIQSPVAKFLSAEIVDALLARTQAKDGDILLF-GADKEKVVSEAMGALRLKVA 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           ++L ++    ++  W++DFP +E   E+  +   H+PFT P     + L+ N + +I + 
Sbjct: 415 EDLDLVGSQ-WKPLWVIDFPMFE-ALEDGGLTPLHHPFTAPLNLTAKELEANPVGAI-SN 471

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H +++    F  + IS    +++FG L  A + G PPH G+A
Sbjct: 472 AYDMVLNGCELGGGSVRIHKADMQATIFRILNISDAEAQDKFGFLLEALKYGAPPHAGLA 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV-ENPKK 597
            G+DR+VML+    ++REV  FP + +    L  +PS  + + L+EL ++I+ E+ KK
Sbjct: 532 FGLDRLVMLMTKTSSIREVIAFPKTASAACPLTNAPSYANPDSLKELNIQIIKEDVKK 589


>gi|327473502|gb|EGF18922.1| aspartate--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 578

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/583 (34%), Positives = 329/583 (56%), Gaps = 12/583 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N +I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++G  ++ +F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEDFPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++    +++ + +   + G +       E+G 
Sbjct: 304 NDSLLIKKALDNQEEVMGICVPDAASAFSKK---QLSHYYQEMKEFGCSRFASLKVENGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +G +A      N E +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 L--VGDLASTFEAENQELL-ARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT  QG  E   G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQSRYQAMHHPFT--QGIFED--GQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKSQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L +
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576


>gi|225011293|ref|ZP_03701749.1| aspartyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225004549|gb|EEG42515.1| aspartyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 586

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 213/590 (36%), Positives = 322/590 (54%), Gaps = 17/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61
           YR+H CG L   ++G  V LSGWV +VR  G I ++D+RD YGITQ++ + + +  E+  
Sbjct: 2   YRSHHCGALSAKEIGQTVHLSGWVQKVRDKGFIGWVDLRDRYGITQLIFDAERSAPELLQ 61

Query: 62  -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AK +  E V+ I G V++R  +  N  + TG IE+  +++++L+ ++  P  +  + + 
Sbjct: 62  AAKELGRETVINITGEVIAR--DNANPQMPTGAIEILVKELKVLNKSKTPPFTIEDQTDG 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR+ + +N++ R ++   +R  +  + FI+  TP L  S+PEGARDF
Sbjct: 120 GEELRAKYRYLDIRRNPVKENLIFRHKVSMEVRKFLSDQGFIDIETPYLIKSTPEGARDF 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 180 VVPSRMNPGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDCE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FV Q+DILN  E + + +  E    +  S  F R+ Y  A++ YG DKPD+R  +   
Sbjct: 239 MAFVTQEDILNVFEGLTKHLLREIHGIDITS--FPRMTYAHAMKTYGNDKPDIRFGMEFA 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
            +     H EF VF      N    V  I   G     R   D + +W +         +
Sbjct: 297 ELNALAQHREFPVF------NAAELVVGIAIPGANNYTRKEIDALIDWVKRPQVGAKGLV 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R +E G+      V K  +  +  A     + Q GD    ++GD     +  +  R  
Sbjct: 351 YARCNEDGSYK--SSVDKFYDQEDLAAWAKATNAQAGDLICVLSGDTDTTRAQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A  LG+ +   F   W++DFP  E + E       H+PFT P+     L   D  ++ A
Sbjct: 409 MATRLGLRDPKVFAPLWVIDFPLLEKDPETGHFHAMHHPFTAPKPEHLDLLDTDPAAVNA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H      +  + +G S+   + +FG L  AF+ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKNTQSKMLALLGFSEAEAKAQFGFLMDAFEYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR+V +L G + +RE   FP +    D+++ +P+ +   QL EL L
Sbjct: 529 AFGLDRLVAILGGQETIREFIAFPKNNAGRDVMIDAPAALDQAQLDELFL 578


>gi|262282065|ref|ZP_06059834.1| aspartyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262262519|gb|EEY81216.1| aspartyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 578

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 203/584 (34%), Positives = 330/584 (56%), Gaps = 14/584 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +   GWV  +R HG + F+++RD  G+ QV  + +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTAQGWVANIRNHGKLAFIELRDREGLLQVFVSGEIEDFAKLEEIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G V+ R    +N  I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DLIAVTGQVVQREERFVNKAIKSGQVELRAEKIEVIASSKTLPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSR+ +
Sbjct: 126 RYLDLRREKMTHNLKVRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRIYK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++G  ++  F  I Y++A+ R+G+DKPD R  + + N+T+    
Sbjct: 245 IRALVEAMLKSVVKK-THGLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKNLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR-MNEWARSQGQPGLAYIFWRLDESG 367
           +E  +  K L      EV  I   G     AF  + ++ + +   + G +       E+G
Sbjct: 304 NESLLIKKALDNQE--EVMGICVPGAAS--AFSKKQLSHYYQEMKEFGCSRFASLKVENG 359

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
            +  +G +A      + E +  R + +DGD    +     +        R  +A+ L +I
Sbjct: 360 QL--VGDLASTFEAESQELL-TRFEAKDGDLILLVMAKKRRAREALGHLRLEVAKALDLI 416

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
           + +   F W++D+P  EWNE++ +    H+PFT  QG  E  +G +    ++  YD+V N
Sbjct: 417 DPSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFE--EGQEPGQFRSHAYDIVLN 472

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G+EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+V
Sbjct: 473 GYEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLV 532

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           M+L G +N+R+V  FP +    D ++ SPS V   Q++EL L +
Sbjct: 533 MILAGEQNIRQVIAFPKNGTGFDPMLESPSLVDQRQVKELHLEL 576


>gi|304372946|ref|YP_003856155.1| aspartyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|304309137|gb|ADM21617.1| aspartyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|330723454|gb|AEC45824.1| aspartyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 573

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 212/587 (36%), Positives = 326/587 (55%), Gaps = 39/587 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-IAKSVRSEWVLCIDG 75
           V   V + GW++ +R      F++IRD+YGI QV+ +  +   + I  S+  E V+ I G
Sbjct: 15  VNHKVAIKGWINNIRKFKDKTFVEIRDYYGILQVIIDLTNDHLKTIFSSLTKESVVEIQG 74

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           ++  R  + IN NI  G +E+  Q I++ S+A ELP P+  + +  E +R +YRFLDLRR
Sbjct: 75  IL--RKRKDINPNIKNGDLEIITQDIKVFSIASELPFPIQDQIDANEDLRLEYRFLDLRR 132

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             L  NI+ R ++   +R     +NFIE  TPIL+ S+PEGAR FLVPSR  +  F++LP
Sbjct: 133 KPLRNNIIFRNKLFYYIRSFFFEKNFIEIETPILSKSTPEGARSFLVPSR-RKNHFFSLP 191

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ YKQLLM SGF++YFQIA  FRDED R DR   EF QLD+E++F   + I   +E 
Sbjct: 192 QSPQLYKQLLMVSGFEKYFQIARVFRDEDLRKDR-QYEFVQLDVELAFPTIESIRKAVEE 250

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPIIMHNVTEHFVHSEFR- 312
           ++  +F +      +S  F  + YD AI ++G+DKPDLR  N ++  N   +   S F  
Sbjct: 251 LIVYLFNKLK--IEISTPFAILEYDQAIDKFGSDKPDLRFDNFLLAANDLNNAQDSLFEK 308

Query: 313 ------VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366
                     IL     Y++++        NR     + +W        + +  ++L+  
Sbjct: 309 NTTKTLFLEDILIDKKEYKIFSEKVVQNKANRLLYVHIQDWQ-------IVHYSFKLNSF 361

Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426
             +     V KH             + + G + F +  +  K C      R  +AQ   +
Sbjct: 362 EAIKTY--VKKH-------------NFKTG-TLFIVNDEYEKVCQGLGALRVAVAQHYNL 405

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           I  + ++F W++++P +E +EE +K+  AH+PFTMP      L   D L ++A  YDLV 
Sbjct: 406 IKQDQYKFLWVVNWPMFELDEETQKLSAAHHPFTMPTFETLDLLKTDPLKVRAQAYDLVL 465

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           NG E+A G IR    ++  Q F  +G+SKE   N+FG L +AF  G+PPHGGIA G+DR+
Sbjct: 466 NGVEVAGGSIRISSKQIQEQIFDTIGLSKEQANNQFGFLLKAFSYGVPPHGGIAFGLDRL 525

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +M+L  ++++R+V  FP++    DLL+ SP+    +QLRE  +++VE
Sbjct: 526 LMILTNSESIRDVIAFPVNSKGQDLLLKSPTLTEDQQLREYNIKLVE 572


>gi|332360523|gb|EGJ38333.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 578

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/583 (34%), Positives = 327/583 (56%), Gaps = 12/583 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    D   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGDIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G V+ R    +N +I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DIIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++G  ++  F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEAFPAISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           +E  +  K L          +P      ++    +++ + +   + G +       E+G 
Sbjct: 304 NESLLIKKALDNQEEVMGICVPDAASAFSKK---QLSHYYQEMKEFGCSRFASLKVENGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +G +A      + E +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 L--VGDLASTFEAESQELL-TRFEAKDGDLILLVMAKKRRAQEALGHLRLEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT  QG  E   G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFED--GQEPGQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +GI +E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGIGREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L +
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576


>gi|327469121|gb|EGF14593.1| aspartate--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 578

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 198/583 (33%), Positives = 329/583 (56%), Gaps = 12/583 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIKDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N +I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  + + +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNSLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++G  ++  F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++    +++ + +   + G +       E+G 
Sbjct: 304 NDSLLIKKALDNQEEVMGICVPDAASAFSKK---QLSHYYQEMKEFGCSRFASLKIENGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +A  G +A       ++ +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 LA--GDLASTFE-AESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKVLDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT  QG  +   G +    ++  YD+V NG
Sbjct: 418 ASLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFQD--GQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +GI +E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGIGREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +L G +N+R+V  FP +    D ++ SPS V + QL+EL L +
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDLRQLKELHLEL 576


>gi|324995196|gb|EGC27108.1| aspartate--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 578

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 201/583 (34%), Positives = 323/583 (55%), Gaps = 12/583 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N +I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++G  ++  F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++       +  +  G    A +     + GN
Sbjct: 304 NDSLLIKKALDNQEEVMGICVPDAASAFSKKQLSHFYQEMKELGCSRFASL-----KVGN 358

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
              +G +A      + E +  R + +DGD    +     +        R  +A+ L +IN
Sbjct: 359 GQLVGDLASTFEAESQELLE-RFEAKDGDLILLVMAKQRRAQEALGHLRIEVAKALNLIN 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT  QG  E   G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFED--GQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHNRKAQEAMFELLGMSWEDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L +
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576


>gi|226227121|ref|YP_002761227.1| aspartyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226090312|dbj|BAH38757.1| aspartyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 593

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 222/594 (37%), Positives = 323/594 (54%), Gaps = 20/594 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61
           RT +CG L  +DVG  VRL GWVHR R  GG++F+D+RD  G+ Q+   P    +     
Sbjct: 7   RTDTCGLLRRADVGRTVRLGGWVHRSRDLGGLVFIDLRDRTGLVQLAFGPAWTAAEVQHA 66

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF---GER 118
           A ++  E V+  +G V++R A+ +N ++ TG++E+    I ++  A    LPV    G++
Sbjct: 67  AAAIGVESVVLCEGEVVAREADRVNPDMGTGEVEVRVTSIRVVGPAVTPALPVARGRGDK 126

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R ++R+LDLRR  L  N+V R R++   R  +    ++E  TPILT  +PEGAR
Sbjct: 127 MPAEELRLRHRYLDLRRPELQDNLVLRHRLMQVTRRFLSDRGYLELETPILTKPTPEGAR 186

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV+ G FYALPQ+PQ YKQL M  G+DRYFQIA CFRDED R+DR P EF Q+D
Sbjct: 187 DYLVPSRVHPGEFYALPQSPQIYKQLFMCCGYDRYFQIARCFRDEDLRADRQP-EFTQID 245

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+E++DIL   + ++  +++E   G+ +   F R+ Y DA+ +YG D+PDLR  ++
Sbjct: 246 IEASFIEREDILTMAQGLIGALWKE--AGHDIPAQFERMSYADAMEQYGCDRPDLRYGLV 303

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + + +  F   +F V +  L+         IP  G   +R   D +   A+  G  GL  
Sbjct: 304 LRDYSSVFAGLDFAVTNAALAAGARVRGVVIPG-GAAWSRKQVDELEALAKGAGAGGLLR 362

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +        + A  GP+AK L    T+  +    + DGD   F+A             R 
Sbjct: 363 L-----RMADGAYDGPLAKFL----TDDAKAAFALTDGDLALFVAAADHVSSPALDRVRQ 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
             A+ L I++     F  +MDFP +E +     +   H+PFT           ++    +
Sbjct: 414 ECARRLEIVDDKAQRFLIVMDFPMFEKDPVTGALAAVHHPFTASHPEDMQAYPDEPARWR 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI-SKEVVENRFGGLYRAFQCGMPPHG 537
           A  YD+V NG E+  G IR     V  + FS +GI S E  E RFG L    + G PPHG
Sbjct: 474 ALAYDVVLNGTELGGGSIRTSDPAVQSRMFSLLGIGSTEEQERRFGFLLEGLRAGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G DRI MLL GA ++R+V  FP +     L  G+P  V  + LREL + +
Sbjct: 534 GIAFGFDRIAMLLSGATSLRDVIAFPKTTAARSLFEGAPVAVPADDLRELHIAV 587


>gi|21672582|ref|NP_660649.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|3915068|sp|P81432|SYD_BUCAP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2947034|gb|AAC05432.1| aspartyl-tRNA synthetase [Buchnera aphidicola]
 gi|21623211|gb|AAM67860.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 584

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 211/591 (35%), Positives = 332/591 (56%), Gaps = 11/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63
           RT  CG++ + D+   V L GWVH++R     IF+D+RD  GI Q+V    ++  F  A 
Sbjct: 2   RTKYCGNIRIIDLHKSVILCGWVHKIRNFSQFIFIDMRDWTGIVQLVFEKKNNKVFTKAV 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++++E  + + G+V  R+A   N N+ TG+IE+   KI++ ++++ LPL         + 
Sbjct: 62  NLKNESCIQVIGIVKKRNAN--NNNLDTGEIEILVNKIKVFNISKNLPLDYSNNSN--DD 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR KYR+LDLRR  L +N+  R +I + +R  M  +NF++  TP LT S+PEGARD+LVP
Sbjct: 118 IRLKYRYLDLRRSELLENLKIRNKITHLIRIFMENKNFLDIETPFLTKSTPEGARDYLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR   G+FYALPQ+PQ +KQ+LM SG D+Y+QI  CFRDED RSDR P EF Q+D+E SF
Sbjct: 178 SRNYPGNFYALPQSPQLFKQILMISGIDKYYQIVKCFRDEDLRSDRQP-EFTQIDIEASF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V    I N +E +++ ++ +  N N   N F +I + D+++RYG+DKPDLRNP+ + +++
Sbjct: 237 VSSTKIRNLVETLIKKIWLKVINYNL--NKFPKISFYDSMKRYGSDKPDLRNPMEIVDIS 294

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +  +  +   F +I              +G   ++   D  + + +  G   L YI    
Sbjct: 295 DIVIEEKVASFFQINLKKKNRIALLCFGQGNKISQKKIDEYSNYVKKFGAKKLFYIKINK 354

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E+        +   L+    E I  + + ++G+  F +A +           R  +  +
Sbjct: 355 IENRFQDIQSSIKNILDKNTLENILRKTNAKNGNILFLLADEEKIVNKSLGMLRIKLGND 414

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLSIKAFQY 482
                 N ++  WI+DFP ++ N +  K    H+PFT + +     L+ N  L+I +  Y
Sbjct: 415 FIFFKKNTWKPVWIVDFPMFKQNSDG-KFSSNHHPFTALKKNNQNKLEKNPNLAI-SDSY 472

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+EI  G +R H +++  + F+ +GI K+    +FG L  A + G PPH GIA G
Sbjct: 473 DLVINGYEIGGGSVRIHDAKIQKKVFNIIGIEKQFQREKFGFLIEALKYGPPPHAGIALG 532

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DRIVMLL    N+R+V  FP + +   L+  SPS +    L ELG+ I++
Sbjct: 533 LDRIVMLLTNTNNIRDVIAFPKTTSANCLMTDSPSKLKKSILNELGINILK 583


>gi|325690285|gb|EGD32289.1| aspartate--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 578

 Score =  369 bits (946), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 204/587 (34%), Positives = 330/587 (56%), Gaps = 22/587 (3%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E 
Sbjct: 7   GNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKED 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           ++ + G V+ R    +N +I +GQIEL A+KIE+++ ++ LP  +       E +R KYR
Sbjct: 67  IIAVTGQVVQREERFVNKSIKSGQIELRAEKIEVIASSKALPFELDQHAHTGEDLRQKYR 126

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           +LDLRR+ + +N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV + 
Sbjct: 127 YLDLRREKMTQNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVYKN 186

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++I
Sbjct: 187 QFYALPQSPQILKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFANEEEI 245

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
              +E +L+ V ++ ++G  ++ +F  I Y++A+ R+G+DKPD R  + + ++T+    +
Sbjct: 246 RALVEAMLKSVVKK-THGLELTEDFPTISYEEAMSRFGSDKPDTRFDLELKSLTDLCQAN 304

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRA----FCDRMNEWARSQGQPGLAYIFWRLD- 364
           E  +  K L          +P      ++     +   M E+  S+        F  L  
Sbjct: 305 ESLLIKKALDNQEEVMGICVPDAASAFSKKQLSHYYQEMKEFCCSR--------FASLKV 356

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E+G +  +G +A       ++ +  R + +DGD    +     +        R  +A  L
Sbjct: 357 ENGQL--VGDLASTFE-AESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVANAL 413

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            +I+ +   F W++D+P  EWNE++ +    H+PFT  QG  E  +G +    ++  YD+
Sbjct: 414 DLIDPSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFE--EGQEPGQFRSHAYDI 469

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG+EI  G +R H  +     F  +G+SKE  E  FG    A + G PPHGG+A G+D
Sbjct: 470 VLNGYEIGGGSLRIHDRKAQEAMFELLGMSKEDYERDFGFFLEALEYGFPPHGGLALGLD 529

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           R+VM+L G +N+R+V  FP +    D ++ SPS V   QL+EL L +
Sbjct: 530 RLVMILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576


>gi|145350037|ref|XP_001419430.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579661|gb|ABO97723.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 623

 Score =  369 bits (946), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 219/603 (36%), Positives = 331/603 (54%), Gaps = 15/603 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R    G L   DVG+   L GW+ + R  GGI F D+RDH GI Q+VA+ D++    E  
Sbjct: 24  RDRLAGTLRDGDVGAEATLCGWIDKSRDMGGIAFADVRDHSGIAQIVADEDASAEVRETF 83

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF---GER 118
            ++R E V+   G V +R  +++N    TG +EL   +++IL SV + LP  V    GE+
Sbjct: 84  GNLRQECVVRARGTVRAR--KSVNKKTKTGTVELVVTELKILNSVGKSLPFAVSESSGEK 141

Query: 119 E-YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEG 176
           E   E  R ++R LDLRR  + +N+  R   + ++R  M  +  F+E  TP+LT S+PEG
Sbjct: 142 EEIKEETRLEHRVLDLRRPQMARNLKLRHDTLRALRKVMEDDYGFLEVETPMLTRSTPEG 201

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR+  G  YALPQ+PQ +KQ+LM +G DRY+Q+A CFRDED R+DR P EF Q
Sbjct: 202 ARDYLVPSRLQPGGAYALPQSPQLFKQMLMVAGVDRYYQVARCFRDEDLRADRQP-EFTQ 260

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+EM+F +   I+   E+++R  F+   + + +  +F ++ Y  A+ +YG+DKPDLR  
Sbjct: 261 LDIEMAFTDDAGIMKLAEDLMRAAFKSGVDVD-LPASFPQMTYAHAMEKYGSDKPDLRYG 319

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
           + M  + +     EF++F+  L+ + G  +   +       N     + + +  +     
Sbjct: 320 LEMTTLDDALAGCEFKIFADALAESNGTVKALVVDDDKKIPNSKLKPKGDVFNEALAAGA 379

Query: 356 LAYIFWRL-DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
               F R+ D+  ++ G   + +         I      + GD   F AG+         
Sbjct: 380 GGLAFARVADDGKSLEGAKGLVEGTAAHAAAMISAS-GAKPGDLMLFAAGNKALVNKTLD 438

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R +IA+   +I  N     WI +FP +E+NE+E + +  H+PFT P     +   +DL
Sbjct: 439 RVRQYIAKTYDMIPENAHAVLWITEFPMFEFNEDENRYEAMHHPFTAPNQDDAAANPDDL 498

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
              +A  YDLV NG EI  G +R +  +V  + F  +G+S E  EN+FG L  AFQ G P
Sbjct: 499 TGARAIAYDLVYNGVEIGGGSLRIYRRDVQEKVFRAIGLSDEEAENKFGYLMEAFQYGAP 558

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+VM+L GAK++R+V  FP +     LL  +P  VS  Q  +L +R V  
Sbjct: 559 PHGGLAFGLDRLVMMLAGAKSIRDVIAFPKTAAGQCLLTEAPGQVSDAQYADLHVRSVAP 618

Query: 595 PKK 597
           P K
Sbjct: 619 PPK 621


>gi|256371344|ref|YP_003109168.1| aspartyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007928|gb|ACU53495.1| aspartyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 588

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 219/586 (37%), Positives = 321/586 (54%), Gaps = 23/586 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH  G L  S +   V + GWV R+R HG  ++F+D+RDH G  Q V +          
Sbjct: 13  RTHYIGALDESLLDRDVSVCGWVARIREHGEHLVFVDVRDHTGTVQCVMDGRG------- 65

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+ +E  + I+G V  R   T N ++ TG IEL  Q  E+L  A+ LPLP+    E  E+
Sbjct: 66  SLHTEAAVRIEGQVARRPEGTENTDLATGAIELRVQHAEVLGDADPLPLPLDEHAEVEET 125

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R ++R+LDLRR  + +N+  R     ++R  M A+ F+E  TP+L   +PEGAR+FLVP
Sbjct: 126 TRLRWRYLDLRRARMQRNLRARAATNAAIRRAMEAQGFVEVETPLLWTPTPEGAREFLVP 185

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR   GS Y+LPQ+PQ  KQLLM  G DRY+QIA C RDED R+DR   EF QLD+E SF
Sbjct: 186 SRTQPGSVYSLPQSPQIAKQLLMIGGVDRYYQIARCLRDEDLRADR-QFEFTQLDLEASF 244

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V Q+D+ + +   +R V       + V      I + +A+ R+G+DKPD R  + + +VT
Sbjct: 245 VTQEDVRSFVSAAIREVIRSVRGVDDVPIGT--ITWHEAMTRWGSDKPDRRFGMELVDVT 302

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E    S  R  +        Y    + A+    +R+  D + + ARS G  GLA+  +R+
Sbjct: 303 EAVRDSGARALAA------DYVTALVVAE--PLSRSRLDELTQRARSAGAKGLAW--FRV 352

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           +    +    P+AK +     EA+  R   + GD+   +A      C+     R  + + 
Sbjct: 353 ESRTPLEIASPLAKAMTPAALEALVERTGAEVGDTILVVADRFEVACTALGTIRLALGRH 412

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L   + +  +  W++DFP +E  ++E  +  AH+PFTMP      L   + L +++  YD
Sbjct: 413 LA--DPDALDVFWVIDFPLFEGVDDEGHLVSAHHPFTMPHADDMDLLEREPLRVRSQSYD 470

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG+E+ SG IR H  ++  Q F  +G+ ++   +RFG L  AF+ G PPHGG A GI
Sbjct: 471 LVMNGWELGSGSIRIHRPDLQAQIFGLLGLDEQAAADRFGFLLDAFRFGPPPHGGFAFGI 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           DR+V LLLG + +REV  FP +Q+  D + G+P  V    L  LGL
Sbjct: 531 DRLVALLLGEETIREVIAFPKTQSGQDPMTGAPKPVDDGVLAALGL 576


>gi|324990753|gb|EGC22689.1| aspartate--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 578

 Score =  368 bits (945), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 203/587 (34%), Positives = 331/587 (56%), Gaps = 22/587 (3%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E 
Sbjct: 7   GNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKED 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           ++ + G V+ R    +N +I +GQIEL A+KIE+++ ++ LP  +       E +R KYR
Sbjct: 67  IIAVTGQVVQREERFVNKSIKSGQIELRAEKIEVIASSKALPFELDQHAHTGEDLRQKYR 126

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           +LDLRR+ + +N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV + 
Sbjct: 127 YLDLRREKMTQNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVYKN 186

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++I
Sbjct: 187 QFYALPQSPQILKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFANEEEI 245

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
              +E +L+ V ++ ++G  ++ +F  I Y++A+ R+G+DKPD R  + + ++T+    +
Sbjct: 246 RALVEAMLKSVVKK-THGLELTEDFPTISYEEAMSRFGSDKPDTRFDLELKSLTDLCQAN 304

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRA----FCDRMNEWARSQGQPGLAYIFWRLD- 364
           E  +  K L          +P      ++     +   M E+  S+        F  L  
Sbjct: 305 ESLLIKKALDNQEEVMGICVPDAASAFSKKQLSHYYQEMKEFCCSR--------FASLKV 356

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E+G +  +G +A       ++ +  R + +DGD    +     +        R  +A+ L
Sbjct: 357 ENGQL--VGDLASTFE-AESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKAL 413

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            +I+ +   F W++D+P  EWNE++ +    H+PFT  QG  E  +G +    ++  YD+
Sbjct: 414 DLIDPSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFE--EGQEPDQFRSHAYDI 469

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG+EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+D
Sbjct: 470 VLNGYEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLD 529

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           R+VM+L G +N+R+V  FP +    D ++ SPS V   QL+EL L +
Sbjct: 530 RLVMILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576


>gi|332363358|gb|EGJ41143.1| aspartate--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 578

 Score =  368 bits (945), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 199/583 (34%), Positives = 324/583 (55%), Gaps = 12/583 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N +I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKTLPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFANEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++G  ++ +F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEDFPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++       +  +  G    A +     + GN
Sbjct: 304 NDSLLIKKALDNQEEVMGICVPDAASAFSKKQLSHFYQEMKELGCSRFASL-----KVGN 358

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
              +G +A      + E +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 359 GQLVGDLASTFEAESQELLE-RFETKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++ +P  EWNE++ +    H+PFT  QG  E   G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVGWPLLEWNEDQNRYQAMHHPFT--QGIFED--GQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L +
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576


>gi|2688349|gb|AAB91506.1| aspartyl-tRNA synthetase (aspS) [Borrelia burgdorferi B31]
          Length = 506

 Score =  367 bits (943), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 205/511 (40%), Positives = 307/511 (60%), Gaps = 11/511 (2%)

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
           INAN+ TG  E+ A+ IEI+S   ELP  +  +    E+ + +YR+LDLRRD+L   I+ 
Sbjct: 2   INANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASENSKLEYRYLDLRRDSLKNKIIL 61

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           R +  + +R  +I   F+E  TP    S+PEGARDF++PSR+++GSFYALPQ+PQ YKQL
Sbjct: 62  RCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIPSRIHKGSFYALPQSPQLYKQL 121

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           +M +GFD+YFQIA C+RDED R DR P EF QLD+EMSFV++++I   +EN+L  +F+  
Sbjct: 122 IMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSFVKKENIFKLIENMLFLIFKNC 180

Query: 265 SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
            N N +   F +I Y  A+ +YG+DKPD R  + + +++ +  +SEF +F   L      
Sbjct: 181 ININ-LPKKFKKITYKKAMNKYGSDKPDTRFELELQDISRNLKNSEFNIFKDTLKNKGSI 239

Query: 325 EVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
           ++  +  K    +RA  + + E A+     GL   F +++   N    G +AK L     
Sbjct: 240 KILIVKDKADKFSRAKINNLEEIAKLYKTQGL--YFTKIE---NNKFSGGIAKFLKTEEQ 294

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQELGIINCNCFEFCWIMDFPFY 443
           E I+    +++ D  FF A +  +  C      R  IA +LG+I+ N FEF W+ DFP +
Sbjct: 295 ELIKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIANDLGLIDENKFEFLWVYDFPLF 353

Query: 444 EWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           E++E  K    AH+ F++P+   + +L+ N   +I    YDLV NG E+ SG IR H  E
Sbjct: 354 EYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI-YDLVLNGVELGSGSIRIHNKE 412

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +  + F  +G  KE  E+RFG   +A + G P HGGIA GIDR++ML+  + ++++V LF
Sbjct: 413 LQQRIFKIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAIGIDRLIMLMTKSTSIKDVILF 472

Query: 563 PMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           P +      L  SPS +S EQL+ELG+ IV+
Sbjct: 473 PKNSFAASPLDNSPSKISNEQLKELGINIVD 503


>gi|325693546|gb|EGD35465.1| aspartate--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 578

 Score =  367 bits (943), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 202/593 (34%), Positives = 327/593 (55%), Gaps = 32/593 (5%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N  I +GQIEL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKAIKSGQIELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNRLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+Q+  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQLVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++G  ++  F  I Y++A+ R+G+DKPD R  + + N+T+    
Sbjct: 245 IRALVEAMLKAVVKK-THGLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKNLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESG- 367
           ++  +  K L          +P           D  + +++ Q    L++ +  + E G 
Sbjct: 304 NDSLLIKKALDSQEEVMGICVP-----------DAASAFSKKQ----LSHYYQEMKEFGC 348

Query: 368 ---------NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                    N   +G +A       +  +  R + +DGD    +     +        R 
Sbjct: 349 SRFASLKVENSQLVGDLASTFE-AESRDLLARFEAKDGDLILLVMAKKRRAQEALGHLRI 407

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+ L +I+ +   F W++D+P  EWNE++ +    H+PFT  QG  E  +G +    +
Sbjct: 408 EVAKALDLIDPSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFE--EGQEPDQFR 463

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG+EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG
Sbjct: 464 SHAYDIVLNGYEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGG 523

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR+VM+L G +N+R+V  FP +    D ++ SPS V   QL+EL L +
Sbjct: 524 LALGLDRLVMILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576


>gi|157151355|ref|YP_001449750.1| aspartyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157076149|gb|ABV10832.1| aspartyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 578

 Score =  366 bits (940), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 198/583 (33%), Positives = 326/583 (55%), Gaps = 12/583 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +   GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTAQGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEEIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G V+ R    +N  I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DLIAVTGQVVQREERFVNKAIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVYK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V +  ++G  ++  F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKT-THGLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           +E  +  K L          +P      ++    +++ + +   + G +       E+G 
Sbjct: 304 NESLLIKKALDNQEEVMGICVPDAASAFSKK---QLSHYYQEMKEFGCSRFASLKVENGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +G +A      + E +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 L--VGDLASTFEAESQELL-TRFEAKDGDLILLVMAKKHRAQEALGHLRLEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT  QG  E  +G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFE--EGQEPGQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +L G +N+R+V  FP +    D ++ SPS V   Q++EL L +
Sbjct: 534 ILTGEQNIRQVIAFPKNGTGFDPMLESPSLVDQRQVKELHLEL 576


>gi|26452525|dbj|BAC43347.1| putative aspartate--tRNA ligase [Arabidopsis thaliana]
          Length = 528

 Score =  365 bits (937), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 210/536 (39%), Positives = 311/536 (58%), Gaps = 20/536 (3%)

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGERE---- 119
           +R E+V+ ++G V SR  E++N  + TG +E+ A+ +EIL+ V  +LP  V    E    
Sbjct: 1   MRLEYVVLVEGTVRSRPNESVNKKMKTGFVEVVAEHVEILNPVRTKLPFLVTTADENKDL 60

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGA 177
             E IR ++R LDLRR  +  NIV R  ++  +R R + +   FIE  TPIL+ S+PEGA
Sbjct: 61  IKEEIRLRFRCLDLRRQRMKNNIVLRHNVVKLIR-RYLEDRHGFIEIETPILSRSTPEGA 119

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSR+  G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF QL
Sbjct: 120 RDYLVPSRIQSGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQL 178

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEM+F+  +D+L   E+++R VF E   G  + + F R+ Y DA+ RYG+D+PD R  +
Sbjct: 179 DMEMAFMPMEDMLKLNEDLIRKVFSEI-KGIQLPDPFPRLTYADAMDRYGSDRPDTRFDL 237

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP---AKGGGGNRAFCDRMNEWARSQGQP 354
            + +V+  F  S FRVF++ L      +V  +P    K         D  NE  +S G  
Sbjct: 238 ELKDVSNVFTESSFRVFTEALESGGIIKVLCVPLGAKKYSNSALKKGDIYNEAMKS-GAK 296

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GL   F ++ ++G + G+  +   L+         +     GD   F  G          
Sbjct: 297 GLP--FLKVLDNGEIEGIAALVSSLDSAGKINFVKQCGAAPGDLILFGVGPVTSVNKTLD 354

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  +A ++ +I+ +     W+ DFP +EWNE E++++  H+PFT P+   E +  +DL
Sbjct: 355 RLRLFVAHDMDLIDHSKHSILWVTDFPMFEWNEPEQRLEALHHPFTAPKP--EDM--DDL 410

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S +A  YD+V NG EI  G +R +  +V  +    +GIS E  E++FG L  A   G P
Sbjct: 411 PSARALAYDMVYNGVEIGGGSLRIYKRDVQEKVLEIIGISPEEAESKFGYLLEALDMGAP 470

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           PHGGIA G+DR+VM+L GA ++R+V  FP +      L  +PS V  +QL++L +R
Sbjct: 471 PHGGIAYGLDRMVMMLGGASSIRDVIAFPKTTTAQCALTRTPSEVDPKQLQDLSIR 526


>gi|325696980|gb|EGD38867.1| aspartate--tRNA ligase [Streptococcus sanguinis SK160]
 gi|327458858|gb|EGF05206.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 578

 Score =  365 bits (936), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 197/583 (33%), Positives = 326/583 (55%), Gaps = 12/583 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N  I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKAIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNDLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++   ++  F  I Y++A+ R+G+DKPD R  + +  +T+    
Sbjct: 245 IRALVEAMLKAVVKK-THSLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKTLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++    +++ + +   + G +       E+G 
Sbjct: 304 NDSLLIKKALDNQEKVMGICVPDAASAFSKK---QLSHYYQEMKEFGCSRFANLKVENGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +G +A       ++ +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 L--VGDLASTFE-AESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT  QG  E  +  D    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFEDRQEPD--QFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +L G +N+R+V  FP +    D ++ SPS V + QL+EL L +
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDLRQLKELHLEL 576


>gi|229496467|ref|ZP_04390182.1| aspartyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316607|gb|EEN82525.1| aspartyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 553

 Score =  365 bits (936), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 219/567 (38%), Positives = 314/567 (55%), Gaps = 23/567 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRT++CG+L    +GS V L+GWV ++R  G + FLD+RD YGITQ+V   DSA  E+  
Sbjct: 2   YRTNTCGELRKEHIGSEVTLAGWVSKLRRMGAMAFLDLRDRYGITQLVF--DSAHPELQS 59

Query: 64  S---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +   V  E VL   G+V  RSA+  N  I TG IEL      +L+ +E  P  +    + 
Sbjct: 60  ALDGVGRECVLQATGMVRERSAK--NDKIATGDIELEVTSCRVLNPSEVPPFTIEDNSDG 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRRD + +NI  R R+    R  +    F+E  TP+L  S+PEGARDF
Sbjct: 118 GDDLRMKYRYLDLRRDPVKRNIELRHRMALLTRNYLDRLGFLEIETPMLIKSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N   FYALPQ+PQ +KQLLM +G DRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 178 VVPSRMNPNEFYALPQSPQTFKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+DIL   E +   +F +     T +  F R+ + +A+  YG+DKPDLR  + + 
Sbjct: 237 MSFVDQEDILTVFEGLAVELFSKIRE-VTPATPFRRMSWYEAMNSYGSDKPDLRFGMPIR 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ--GQPGLA 357
            +T         +  +   V       AI  +G     R   D + ++ +    G  GL 
Sbjct: 296 EITTLAQGHGMSLMDEAAYVG------AIAVEGAAEYTRKQIDALTDYVKRPQVGAKGLI 349

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADA 416
           +I    D S   +    V K  +    +AI    + + GD    + G +        +  
Sbjct: 350 WIKCNADGSFKSS----VDKFFDADALKAIAQAAEAKSGDLVLILLGTERYSVLKQLSTL 405

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R H+A   G+ + N FE  W++DFP  EW+EE ++    H+PFT P+    SL   D  +
Sbjct: 406 RLHVADLAGLKDPNKFECLWVVDFPLLEWDEETQRFYAMHHPFTSPKPEDISLLSTDPGA 465

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD+V NG E+  G IR H S++  + F  +G +KE  E +FG L  AF+ G PPH
Sbjct: 466 VRANAYDMVINGVEVGGGSIRIHDSQLQHKMFEVLGFTKEKAEEQFGFLMNAFKYGAPPH 525

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG+A G+DR V ++ G  ++R+   FP
Sbjct: 526 GGVAFGLDRWVSIMAGLDSIRDCIAFP 552


>gi|162456552|ref|YP_001618919.1| aspartyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
 gi|161167134|emb|CAN98439.1| aspS [Sorangium cellulosum 'So ce 56']
          Length = 649

 Score =  364 bits (935), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 230/629 (36%), Positives = 329/629 (52%), Gaps = 48/629 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           RTH CGDL  +D+G  V L GWV R R HGG IF+D+RD  G+TQ+V   D +  E    
Sbjct: 10  RTHRCGDLREADIGKEVVLFGWVARRRDHGGCIFIDLRDRTGVTQIVF--DRSYLEAIKK 67

Query: 62  ----------------AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105
                           A+  RSEWV+ + G+V+SR    +N  I TG IE+   +  I +
Sbjct: 68  HGLKVEEKDLVDAHAAAERARSEWVIGVRGVVVSREG-NVNDKIDTGAIEVWVAEATIFN 126

Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
            AE  P  +  E E  E IR ++R+LDLRR  L + +  R  I  + R  +  +  +E  
Sbjct: 127 RAETPPFEIADEIETREEIRLQHRYLDLRRAPLQRALRMRHEINRATRNYLSDKGCLELE 186

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP L   +P GAR+FLVPSR++ G FYAL ++PQ YKQL M +GFDRYFQI  CFRDED 
Sbjct: 187 TPFLVKYTPGGARNFLVPSRISAGKFYALAESPQLYKQLFMVAGFDRYFQIVKCFRDEDL 246

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV----SNNFLRICYDD 281
           R DR P EF Q+D+E+SFV QDD+   ME ++  VF+     +      +  F R+ Y +
Sbjct: 247 RIDRQP-EFTQIDVELSFVNQDDVFGLMEGLVFAVFKAALGKDLTELYPTGRFPRMPYAE 305

Query: 282 AIRRYGTDKPDLRNPIIMHNVT----EH-------FVHSEFRVFSKILSVNPGYEV---W 327
           ++RR+G DKPDLR  I   ++T    EH       +V    +  S  L  +   E+    
Sbjct: 306 SMRRFGNDKPDLRFGIEHTDLTDLIVEHNGGGVPFWVELAEKFKSGKLRRDLPAEIVKGL 365

Query: 328 AIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI 387
            IPA      +   D        +G  GLA    +L E G+     P+ K +     + +
Sbjct: 366 VIPASANLSRQQTEDLERGLRDVKGFRGLARA--KLAEDGSWT-QSPLTKSITPELRQKL 422

Query: 388 RVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII----NCNCFEFCWIMDFPFY 443
              L  + GD   F  G      +  A  R  +A+++G+I    + + + F W+ + P +
Sbjct: 423 NEALGAKPGDVLCFQFGKEAVVHTVMAKLRIDVAKKMGLIPEYGHGDQWRFLWVTNPPLF 482

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E++EE  +   AH+ FT P     +L  +D   ++ ++YDLV NGFEI  G IR H  EV
Sbjct: 483 EFDEETGRWAAAHHAFTRPIDEHVALLESDPARVECYRYDLVLNGFEIGGGSIRLHDPEV 542

Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             + F  +GI +    ++FG L  A + G PPHGGIA G+DR+ MLL GA  +R+V  FP
Sbjct: 543 QARVFKTLGIDENDARDKFGFLLDALRSGAPPHGGIALGMDRLAMLLSGAPTLRDVIPFP 602

Query: 564 MSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            +    D + G+P  V   QL EL ++  
Sbjct: 603 KTNQGTDQMTGAPVLVDAAQLAELHVKTA 631


>gi|308807226|ref|XP_003080924.1| COG0173: Aspartyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116059385|emb|CAL55092.1| COG0173: Aspartyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 621

 Score =  364 bits (934), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 210/597 (35%), Positives = 329/597 (55%), Gaps = 19/597 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWV 70
           G +DVGS   L GW+ + R  GGI F D+RD  GI Q+V   +++    E  +++R E V
Sbjct: 31  GDADVGSETTLCGWIDKSRNMGGIAFADVRDSSGIAQIVLEEEASAEVREAFQALRQECV 90

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF---GERE-YPESIR 125
           +   G V  R  +++N    TG +E+   +++IL +V   LP  V    GE+E   E  R
Sbjct: 91  VRARGTVRRR--KSVNTKTKTGTVEVVVSELKILNTVGRSLPFAVSESSGEKEEIKEETR 148

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVP 183
            ++R LDLRR  + +N+  R   + ++R R++ ++  F+E  TP+LT S+PEGARD+LVP
Sbjct: 149 LEHRVLDLRRPQMARNLKLRHDTLRALR-RVLEDDYGFLEVETPMLTRSTPEGARDYLVP 207

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+  G  YALPQ+PQ +KQ+LM +G DRY+Q+A CFRDED R+DR P EF QLD+EM+F
Sbjct: 208 SRLQPGGAYALPQSPQLFKQMLMVAGVDRYYQVARCFRDEDLRADRQP-EFTQLDIEMAF 266

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +++D ++   E+++R  F+   NG  V    +F R+ Y +A+ +YG+DKPDLR  + M  
Sbjct: 267 MDEDGVMKLAEDLMRAAFK---NGVNVELPTSFPRMTYAEAMEKYGSDKPDLRYGLEMST 323

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           + +     EF++F+  L+     +   +   K    N     + + +  +         F
Sbjct: 324 LDDALNGCEFKIFADALATGGTVKALVVNDEKTKIPNSKLKPKGDVFEEAVAAGAGGLAF 383

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G               + +A+  +   + GD   F AG            R ++
Sbjct: 384 ARVGEDGASLEGAKGLVEGTAAHAKAMIDKSGAKPGDLMLFAAGKKALVNKTLDRVRQYV 443

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G +  N     W+ +FP +E+NE+E++ +  H+PFT P         +DL + ++ 
Sbjct: 444 AKTYGFVPENAHAVLWVTEFPMFEYNEDEERYEAMHHPFTSPNQDDLMANPDDLSNARSI 503

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG EI  G +R +  ++  + F  +G+S    E +FG L  AFQ G PPHGG+A
Sbjct: 504 AYDLVYNGVEIGGGSLRIYRRDIQEKVFRAIGLSDAEAEEKFGYLLEAFQYGAPPHGGLA 563

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VM+L GAK++R+V  FP +     LL  +P  VS EQ  +L ++    P K
Sbjct: 564 FGLDRLVMMLAGAKSIRDVIAFPKTAAGQCLLTEAPGQVSAEQYADLHIKSTSPPPK 620


>gi|332366171|gb|EGJ43927.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 578

 Score =  364 bits (934), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 199/582 (34%), Positives = 326/582 (56%), Gaps = 12/582 (2%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E 
Sbjct: 7   GNYGLEQVGQTMIATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKED 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           V+ + G V+ R    +N +I +GQ+EL A+KIE+++ ++ LP  +       E +R KYR
Sbjct: 67  VIAVTGQVVQREERFVNKSIKSGQVELRAEKIELIASSKVLPFELDQHAHTGEDLRQKYR 126

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           +LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV + 
Sbjct: 127 YLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPCLTKSTPEGARDFLVPSRVFKN 186

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++I
Sbjct: 187 QFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEEI 245

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
              +E +L+ V ++ ++G  ++ +F  I Y++A+ R+G+DKPD R  + + ++T+    +
Sbjct: 246 RALVEAMLKAVVKK-THGLELTEDFPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQSN 304

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
           +  +  K L          +P      ++       +  +  G    A +     E+G +
Sbjct: 305 DSLLIKKALDNQEEVMGICVPDAASAFSKKQLSHHYQEMKEFGCSRFASLKV---ENGQL 361

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
             +G +A       ++ +  R + +DGD    +     +        R  +A+ L +I+ 
Sbjct: 362 --VGDLASTFE-AESQDLLARFEAKDGDLILLVMAKQRRAQEALGHLRIEVAKALNLIDP 418

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
           +   F W++D+P  EWNE++ +    H+PFT  QG  E  +  D    ++  YD+V NG+
Sbjct: 419 SLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFEDEQEPD--QFRSHAYDIVLNGY 474

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM+
Sbjct: 475 EIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVMI 534

Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           L G +N+R+V  FP +    D ++ SPS V   QL+EL L +
Sbjct: 535 LAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576


>gi|125717428|ref|YP_001034561.1| aspartyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125497345|gb|ABN44011.1| Aspartyl-tRNA synthetase 1, putative [Streptococcus sanguinis SK36]
          Length = 578

 Score =  363 bits (933), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 197/583 (33%), Positives = 325/583 (55%), Gaps = 12/583 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N  I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKAIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNDLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++   ++  F  I Y++A+ R+G+DKPD R  + +  +T+    
Sbjct: 245 IRALVEAMLKAVVKK-THSLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKTLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++    +++ + +   + G +       E+G 
Sbjct: 304 NDSLLIKKALDNQEKVMGICVPDAASAFSKK---QLSHYYQEMKEFGCSRFANLKVENGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +G +A       ++ +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 L--VGDLASTFE-AESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT  QG  E   G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFT--QGIFED--GQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L +
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLEL 576


>gi|313678619|ref|YP_004056359.1| aspartate--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950297|gb|ADR24892.1| aspartate--tRNA ligase [Mycoplasma bovis PG45]
          Length = 567

 Score =  363 bits (932), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 217/581 (37%), Positives = 327/581 (56%), Gaps = 28/581 (4%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G L   ++G  + L GWV   R  G + F+D+RD YGI Q V       FE   +V  E 
Sbjct: 9   GLLTKKNLGEKIALYGWVSNKRRFGPLTFIDLRDRYGIVQCV-------FEKDLNVTKES 61

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKY 128
           V+ ++G V+ R +   N+ I TG IE+   K ++LS +  ELP  +  + +  E I+ KY
Sbjct: 62  VMYVEGTVVKRLSP--NSEIPTGDIEIKVSKHKVLSQSVNELPFAIRDDIDVREEIKLKY 119

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR  + K I+ R +I++ +R  +    FIE  TP L  S+PEGARDFLV +R N+
Sbjct: 120 RYLDLRRPEMQKTIMFRAKIMHEIRNFLYENEFIEIETPTLAKSTPEGARDFLVATR-NK 178

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G F+ALPQ+PQ +KQLLM SGF++Y+QIA C+RDED R DR P EF QLD+E SF+  DD
Sbjct: 179 GQFWALPQSPQLFKQLLMISGFEKYYQIARCYRDEDSRKDRQP-EFVQLDIETSFLNVDD 237

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
               +E +++ +    S G  V   FL+I Y DAI+ YG+DKPDLR    + ++ +    
Sbjct: 238 FHKIIEKLVKRIMS--SAGIKVKTPFLKIKYADAIKDYGSDKPDLRYEYKITDINDFCNE 295

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++F +     S    +    +       N+     + E A+ + +  + + F  +  +G 
Sbjct: 296 TDFAIIKDAKSKRMLFVDSIV-------NKKEFSILEEIAK-KNKANILFYFTVV--NGE 345

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           ++      K    V  EA ++  +  + D  +F+  +  +  S A  A       +    
Sbjct: 346 ISQTNFAKK----VPLEAKKLINENDNKDGTYFVVANTYENASQALGAVRVELNNMFNYA 401

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            + + F WI+D+P +E+NE+E K D AH+PFT     ++ L    +  I A  YDLV NG
Sbjct: 402 KDEYRFAWIVDWPMFEFNEDENKWDAAHHPFTRFAHTLDELDKLSIDKINAIAYDLVLNG 461

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           FEIA G  R +   +  + F+ +G++KE  E++FG   +AF  G+PPH GIA G+DR++M
Sbjct: 462 FEIAGGSARIYDKNMQEKMFNLIGLTKEQQESKFGWFLKAFDYGVPPHCGIAFGLDRLIM 521

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           LL   K++R+V  FP +    DLLM +PS V++EQL ELGL
Sbjct: 522 LLAHQKSIRDVIPFPKNSKNQDLLMDAPSDVTMEQLDELGL 562


>gi|197294531|ref|YP_001799072.1| aspartyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853858|emb|CAM11820.1| Aspartyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 561

 Score =  363 bits (932), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 210/590 (35%), Positives = 327/590 (55%), Gaps = 29/590 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M    +H   +L + + G  V L G++ R R  G  IFLD+RD  G+ Q++   ++  ++
Sbjct: 1   MKNKYSHYNNELTLQNKGESVFLKGFLFRKRNLGKNIFLDLRDVSGVIQLLVKENNPQYQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              +++ E V+ + G+V+ R  +  N+ + TG+IE+    + +LS  + LPL VF  ++ 
Sbjct: 61  QITTLKPETVMEVKGVVVERINK--NSKLKTGEIEILVSFVNVLSEPQTLPLNVFQSQDS 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLR   +   +++R  I  S+R  ++  +F+E  TPIL+ S+PEGARD+
Sbjct: 119 LEETRLKYRYLDLRNPDVKHFLIQRHHITQSIRQTLLKNHFLELETPILSKSTPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+  G+FYALPQ+PQ YKQL M +GF++YFQ+A CFRDED R+DR P EF Q+D+E
Sbjct: 179 LVPSRIYPGNFYALPQSPQIYKQLYMIAGFEKYFQVARCFRDEDLRADRQP-EFTQIDIE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF  Q +I+   E ++  +F+     N +S  F  + Y+ A+  YGTDKPDLRNP+ + 
Sbjct: 238 TSFCTQAEIMTLTEEIIIDLFKNIWQQN-LSKPFATLTYNQALELYGTDKPDLRNPLKIF 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           + T  F       F K      G++V   P       R   ++   +  +     L    
Sbjct: 297 DFTPFFTSD----FGK--DNLKGFKVSKTPFL----TRRQVEKYQLFFENNFSLKLLTF- 345

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               E  N    G ++K         I+    +Q+ + CF ++G   K   +    RN +
Sbjct: 346 ----EKKNDKITGGISKF--------IKDNSFLQNDEICFVVSGVKEKVHKYLGIFRNKL 393

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A +L +IN N     WI+DFP  E++    +    H+PFT P   ++SLK +   ++ A 
Sbjct: 394 AADLSLINENQESLLWIVDFPLLEFDASNNRFYSLHHPFTAP-CNLDSLKKDPQKAL-AL 451

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G  R +  E     F  +G S++ ++ +FG L  A Q G PPHGG+A
Sbjct: 452 AYDLVWNGYEVGGGSFRINNPETQGIIFKLLGFSQQEIQKKFGFLIEALQYGTPPHGGLA 511

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G+DR+VML    +N+++V  FP +Q+  DL++ SP  V  EQL+ L L+
Sbjct: 512 LGLDRLVMLFTKTQNIKDVIAFPKTQSAKDLMLDSPGEVDQEQLKILKLK 561


>gi|291320375|ref|YP_003515638.1| aspartyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752709|emb|CBH40683.1| Aspartyl tRNA synthetase (Aspartate tRNAligase) (AspRS) [Mycoplasma
           agalactiae]
          Length = 567

 Score =  363 bits (931), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 219/585 (37%), Positives = 325/585 (55%), Gaps = 28/585 (4%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G L   +VG  V L GWV   R  G + F+D+RD YGI Q V       FE   +V  E 
Sbjct: 9   GLLTKKNVGEKVYLYGWVSNKRRFGPLTFIDLRDRYGIVQCV-------FEKDVNVTKES 61

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKY 128
           V+ ++GLV+ R     N  I TG IE+   K  ILS +  ELP  +  + E  E I+ KY
Sbjct: 62  VMYVEGLVIKRL--NPNREIPTGDIEIKVSKYNILSQSVNELPFAIRDDIEVREEIKLKY 119

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR  + K I+ R ++++ +R  +   +F+E  TP L  S+PEGARDFLV +R N+
Sbjct: 120 RYLDLRRPEMQKTILFRAKVMHEIRNFLYENDFVEIETPTLAKSTPEGARDFLVGTR-NK 178

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G F+ALPQ+PQ +KQLLM SGF++Y+QIA C+RDED R DR P EF QLD+E SF++ +D
Sbjct: 179 GQFWALPQSPQLFKQLLMISGFEKYYQIARCYRDEDSRKDRQP-EFVQLDIETSFLKVED 237

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
              T+E +++ +    S G  V   F +I Y DAI+ YG+DKPDLR    + ++      
Sbjct: 238 FHKTIEKLVKRIM--LSAGVNVKIPFQKIKYADAIKDYGSDKPDLRYEYKITDIDNFCAD 295

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++F +     S    +    I  K           + E    + +  + + F  ++  G 
Sbjct: 296 TDFVIIKDAKSKRMLFVDSVISKKEFS--------ILEEIAKKNKANILFYFTVVN--GE 345

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           ++      K    V  EA ++  +  + D  +FI  +  +  S A  A       +    
Sbjct: 346 ISQTNFAKK----VPLEAKKLINENDNKDGTYFIVANSYENASQALGAVRVELNNMFNYA 401

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            + + F WI+D+P +E+NE+E K D AH+PFT     ++ L    +  I A  YDLV NG
Sbjct: 402 KDEYRFAWIVDWPMFEFNEDENKWDAAHHPFTRFAHNLDELDKLPIDKINAVAYDLVLNG 461

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           FEIA G  R +  E+  + F+ +G++K   E++FG   +AF  G+PPH GIA G+DR++M
Sbjct: 462 FEIAGGSARIYDKEMQEKMFNLIGLTKTQQESKFGWFLKAFDYGVPPHCGIAFGLDRLIM 521

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           LL   K++R+V  FP +    DLLM +PS V+ +QL ELGL +++
Sbjct: 522 LLTKQKSIRDVIPFPKNSKNQDLLMDAPSDVTNDQLAELGLELIK 566


>gi|194246665|ref|YP_002004304.1| aspartyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|193807022|emb|CAP18458.1| Aspartyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 574

 Score =  363 bits (931), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 214/592 (36%), Positives = 326/592 (55%), Gaps = 33/592 (5%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+  DL +  +G  V L GW+   R  G +IFLD+RD  G  Q++   D   ++    +
Sbjct: 6   THNNNDLNLQHIGEQVYLKGWISNKRNLGKMIFLDLRDFTGNVQLIVKSDHLQYQQILCL 65

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESI 124
           + E V+ + GLV+ R  +  N   IT  IE+   ++ ILS A+ LP  +     E  E I
Sbjct: 66  KIETVVEVKGLVIERINK--NKKSITNDIEVLISELFILSPAKTLPFSINSTSIESLEEI 123

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+ +   ++ R  I   +R  ++  +F+E  TP+L+ S+PEGARD+LVPS
Sbjct: 124 RLKYRYLDLRRNEMKLFLITRHNITQIIRQNLLVNDFLELETPLLSKSTPEGARDYLVPS 183

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G FYALPQ+PQ +KQL M SGF+RYFQIA CFRDED RSDR P EF Q+D+E SF+
Sbjct: 184 RLYAGKFYALPQSPQIFKQLYMISGFERYFQIARCFRDEDLRSDRQP-EFTQIDIETSFL 242

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            + +I++ +EN++  +F++    N +S+ FL + Y+ AI  YGTDKPDLR  + + N+T 
Sbjct: 243 TKKNIMHLIENIMIDLFQKIWYKN-LSSPFLTLTYEKAINTYGTDKPDLRFELPIENIT- 300

Query: 305 HFVHSEF---RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           H++  EF    +F+         E+  I  K         +++    +S  +        
Sbjct: 301 HYLKQEFIQKNIFNS--------EIRGIKVKKNFSKINLTNKIINKYKSLLKEKYNLNLV 352

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----IAGDPLKFCSFAADAR 417
            L +   V   G +++H+N  +   ++        D  FF     + D L         R
Sbjct: 353 TLKKENQVIK-GFLSQHIN--DNSFLK-------EDEIFFSFNDYSQDQLYINKALGFVR 402

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           N +AQ+L +I+ N     WI DFP +E++ +  +    H+PFT P+  +   K N + S 
Sbjct: 403 NQLAQDLNLIDYNRESLLWITDFPLFEFDVKTNRYYSTHHPFTAPK-DISIFKKNPIKSF 461

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YDLV NG+EI  G +R +   +    F  +G ++  +E +FG    + + G PPHG
Sbjct: 462 -AQSYDLVWNGYEIGGGSLRINDYSIQQLMFKTLGFTEVEIEKKFGFFIESLKYGTPPHG 520

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           GIA G+DR+ ML     N+R V  FP +Q+  DL++ +P +V  EQL+ L L
Sbjct: 521 GIALGLDRLSMLFNKTNNIRNVIGFPKTQSAKDLMLETPDSVEQEQLKILNL 572


>gi|71894451|ref|YP_278559.1| aspartyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|71851239|gb|AAZ43848.1| aspartyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 566

 Score =  363 bits (931), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 218/596 (36%), Positives = 325/596 (54%), Gaps = 40/596 (6%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           ++   S   L  S +   V L GWV   R  G I F+D+RDH GI Q+V + D       
Sbjct: 2   KFSKISNTSLDESYINKSVTLYGWVATKRKFGKISFVDLRDHSGIIQLVFSEDI------ 55

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +  E V+ + G+V  R  + IN ++ TG IE+   + E+LS ++ELP  +  +    E
Sbjct: 56  -KLSKESVIKVTGVVSKR--KDINPSLKTGTIEVLVSEYELLSSSKELPFEISEKISASE 112

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YRFLDLRR+++   I  R+ +  ++R  +  E F+E  TPIL  ++PEGARDFLV
Sbjct: 113 DLRMEYRFLDLRRESMQNAISLRSEVFFAIREFLNKEKFLEIETPILAKATPEGARDFLV 172

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R +Q +F+ALPQ+PQ +KQLLMASGF++Y+QIA CFRDED R DR P EF QLDME+S
Sbjct: 173 PTR-SQNNFFALPQSPQLFKQLLMASGFEKYYQIARCFRDEDSRKDRQP-EFTQLDMEVS 230

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+E       +EN+ + VF++  N + +   F R+ +D  I+ YGTDKPDLR  + + ++
Sbjct: 231 FLEVSAFQKLVENLFKYVFKKVLNVD-IQTPFQRLDFDTCIKDYGTDKPDLRFDLKIQDI 289

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
             +F    F +  K  S    +    I  K           + E A+      L   F+ 
Sbjct: 290 NNYFQEDNFEIIKKQASKRMLFINEQITKKDFKA-------LEEIAKKNSANIL---FYF 339

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD----SCFFIAGDPLKFCSFAADARN 418
           + E+G V        H N  N     V   ++D +    +CF +A +       A+ A  
Sbjct: 340 VLENGKVL-------HSNFANKAPRDVEKLIKDHNFKNGTCFIVANN----FDNASKALG 388

Query: 419 HIAQELGII---NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            +  EL  +     N + F WI+++P +E+NEE +    AH+PFTM +  +E  K     
Sbjct: 389 ALRVELNSMFNYAKNSYNFSWIINWPMFEFNEESQSYQAAHHPFTMFENTVEEFKTLSKN 448

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            IKA  YDLV NGFE+ SG  R +  EV    F ++G+ K+  E +FG   +AF  G+PP
Sbjct: 449 QIKAKSYDLVLNGFELGSGSARIYSKEVQELIFESLGMDKKEQEEKFGFFLKAFDYGLPP 508

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           H GI  G+DR++M+L     +R+V  FP +    D+   +PS +S +QL EL L +
Sbjct: 509 HCGIGLGLDRLLMILANKSTIRDVIAFPKNAKNKDIFTKAPSEISSKQLSELFLEL 564


>gi|301093825|ref|XP_002997757.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262109843|gb|EEY67895.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 653

 Score =  362 bits (930), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 226/638 (35%), Positives = 342/638 (53%), Gaps = 55/638 (8%)

Query: 4   YRTHSCGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           +RTHSCG+L      G  V LSGWV  +RP G I FL +RD YG+TQ+V   D   +  +
Sbjct: 22  FRTHSCGELRQEPHEGQRVTLSGWVDAIRPFGPISFLSLRDRYGVTQLVLEKDFLQSSSD 81

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGERE 119
           +   +R E V+   G+V +R A   N  + TG +E+  ++I  L+    LP+ V  G   
Sbjct: 82  VVSKIRPESVVQASGVVRARPANMRNDKMATGAVEVVVEEITELNSCVNLPIQVATGSEV 141

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E  R ++R+LDLRR  L +N+V R++I  + R  + +E F+E  TP L  S+PEGAR+
Sbjct: 142 ANEDTRLRHRYLDLRRSALQQNLVVRSKISLAARNFLSSEGFLEIETPTLFKSTPEGARE 201

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP+R   G FYAL Q+PQQYKQLLM  G D+YFQ+A C+RDE  R+DR P EF Q+D+
Sbjct: 202 FLVPTRTT-GQFYALTQSPQQYKQLLMVGGLDKYFQLARCYRDEGGRADRQP-EFTQIDL 259

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV ++D+++ ME +++ +++  S        F+R+ +D+A+ R+G DKPD R  I +
Sbjct: 260 EMSFVTREDVMHLMERLVKEIWKAASK-ELPDRPFVRMPFDEAMHRFGVDKPDTRYGIEL 318

Query: 300 HNVTEHFVHSEFRVF-SKILSVNPGYE-----VWAIPAKG---GGGNRAFCDRMNEWARS 350
            +V +     EF  F + +L+ N         V AI AK    GG +R   D + + A+ 
Sbjct: 319 KDVDDLLQECEFAPFKTALLNKNTKIHSKRGVVRAINAKSLATGGFSRKDVDELEKTAKR 378

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
             + G   +    D+    +    +AK L+    E +  RLD ++GD   F AG   +  
Sbjct: 379 TSKTGAFVVKVEADKKWKSS----LAKKLSASEMEQLNERLDAEEGDVLIFSAGSYHEVN 434

Query: 411 SFAADARNHIAQELGI-------INCNCFEFCWIMDFPFYEWNEEEK----------KID 453
           +     R +++Q L         ++ N F   W++DFP +E +E++            + 
Sbjct: 435 TLLGRLRTYMSQLLYAKGFLQQELDPNNFHHLWVIDFPMFERSEDDDGNILESGDKVALS 494

Query: 454 FAHNPFTMP-------------QGGMESL-----KGNDLLSIKAFQYDLVCNGFEIASGG 495
             H+PFT P             + G +SL         LL I A  YD+VCNG+E+  G 
Sbjct: 495 ATHHPFTAPRPDHAVALDEILAKAGDKSLLEDPEVAEKLLEITAQHYDIVCNGWELGGGS 554

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           IR H +++    F +V     +    F  L +A   G PPHGGIA G+DR+V +L GA +
Sbjct: 555 IRIHQAKLQQAVFEDVLELPTLQRQSFEHLLQALSHGAPPHGGIALGLDRLVAILCGAPS 614

Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +R+V  FP S    +L+  +P  V  +QL E  +++ E
Sbjct: 615 LRDVIAFPKSSTGNELMTNAPGPVLPQQLEEYHIQVNE 652


>gi|148377712|ref|YP_001256588.1| aspartyl-tRNA synthetase (aspartate-trnaligase) (AspRS) [Mycoplasma
           agalactiae PG2]
 gi|148291758|emb|CAL59147.1| Aspartyl tRNA synthetase (Aspartate tRNAligase) (AspRS) [Mycoplasma
           agalactiae PG2]
          Length = 567

 Score =  362 bits (929), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 221/592 (37%), Positives = 329/592 (55%), Gaps = 42/592 (7%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G L   +VG  V L GWV   R  G + F+D+RD YGI Q V       FE   +V  E 
Sbjct: 9   GLLTKKNVGEKVYLYGWVSNKRRFGPLTFIDLRDRYGIVQCV-------FEKDVNVTKES 61

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKY 128
           V+ ++GLV+ R     N  I TG IE+   K  ILS +  ELP  +  + E  E I+ KY
Sbjct: 62  VMYVEGLVVKRL--NPNKEIPTGDIEIKVSKYNILSQSVNELPFAIRDDIEVREEIKLKY 119

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR  + K I+ R ++++ +R  +   +F+E  TP L  S+PEGARDFLV +R N+
Sbjct: 120 RYLDLRRPEMQKTILFRAKVMHEIRNFLYENDFVEIETPTLAKSTPEGARDFLVGTR-NK 178

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G F+ALPQ+PQ +KQLLM SGF++Y+QIA C+RDED R DR P EF QLD+E SF++ +D
Sbjct: 179 GQFWALPQSPQLFKQLLMISGFEKYYQIARCYRDEDSRKDRQP-EFVQLDIETSFLKVED 237

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
              T+E +++ +    S G  V   F +I Y DAI+ YG+DKPDLR    + ++      
Sbjct: 238 FHKTIEKLVKRIM--LSAGVNVKIPFQKIKYADAIKDYGSDKPDLRYEYKITDIDNFCAD 295

Query: 309 SEFRVF-----SKILSVNP--GYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++F +       +IL V+     + ++I  +    N+A                   +F+
Sbjct: 296 TDFAIIKDAKSKRILFVDSVISKKEFSILEEIAKKNKA-----------------NILFY 338

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
               +G ++      K    V  EA ++  +  + D  +FI  +  +  S A  A     
Sbjct: 339 FTVVNGEISQTNFAKK----VPLEAKKLINENDNKDGTYFIVANSYENASQALGAVRVEL 394

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             +     + + F WI+D+P +E+NE+E K D AH+PFT     ++ L    +  I A  
Sbjct: 395 NNMFNYAKDEYRFAWIVDWPMFEFNEDENKWDAAHHPFTRFAHNLDELDKLPIDKINAVA 454

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NGFEIA G  R +  E+  + F+ +G++K   E++FG   +AF  G+PPH GIA 
Sbjct: 455 YDLVLNGFEIAGGSARIYDKEMQEKMFNLIGLTKAQQESKFGWFLKAFDYGVPPHCGIAF 514

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G+DR++MLL   K++R+V  FP +    DLLM +PS V+ +QL ELGL +++
Sbjct: 515 GLDRLIMLLTKQKSIRDVIPFPKNSKNQDLLMDAPSDVTNDQLAELGLALLK 566


>gi|94676957|ref|YP_588764.1| aspartyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|123384132|sp|Q1LTF0|SYD_BAUCH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|94220107|gb|ABF14266.1| aspartyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 589

 Score =  362 bits (929), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 210/596 (35%), Positives = 330/596 (55%), Gaps = 13/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           RT  CG L  S +G  V L GWV+R R  G +IF+++ D  G  QVV +    + F  A 
Sbjct: 2   RTIYCGQLNKSHLGQEVILCGWVYRYRNLGRLIFIELSDREGRVQVVFDLTHPSIFSNAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+++ + + G+V +R  + IN NI TG+IE+ A  + IL+ ++ LPL +       E 
Sbjct: 62  KLRNDFCIQLHGIVRTRLDKQINYNITTGEIEVLATNLTILNSSQPLPLDINFHNN--EE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLR   + + +  R +I + +R  M  + F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKFRYLDLRNPEMAQRLKLRAKITSLVRHFMEKKGFLDIETPMLTKTTPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGQFYALPQSPQLFKQLLMISGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVEASF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + I   ME+++R ++ E         NF  + Y  A+ R+G+DKPDLRNPI + +V 
Sbjct: 239 INAEQICKIMEDLVRHLWREIQEVEL--ENFQYMSYTAAMYRFGSDKPDLRNPIEIVDVV 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR- 362
           +   ++   + + I       +   +  +   G +   + + ++ +     G+ +I W  
Sbjct: 297 DLVKNTTCTILADIAK---DIKNRVVALRVPNGAKLSLNDIKKYEKYIQTYGIKFIIWMK 353

Query: 363 --LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               + G       + K+L   +  +I  R    DGD  FF AG+     +     R  +
Sbjct: 354 VYQGKDGVKTTQSSITKYLLPEDIMSIIERTGACDGDILFFAAGNNNIINNVMGALRIKL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +L +   N +   WI+DFP +E  ++E  +   H+PFT P+           L  KA 
Sbjct: 414 GCDLKLNRENSWAPLWIVDFPMFE-KDDEGNLHAVHHPFTAPKNIDIPTLLQYPLKAKAN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+ SG +R H +E+    FS +G+++    ++FG    A + G PPH G A
Sbjct: 473 AYDMVINGYEVGSGSVRIHCAELQQTIFSILGMTRNEQSSKFGFFIDALKYGAPPHAGFA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VMLL   +N+R+V  FP +    DL+  +PS  +   L+EL + I++  K
Sbjct: 533 FGLDRLVMLLTSTENIRDVIAFPKTTTAIDLMTEAPSIGNTIALKELSIEILDKNK 588


>gi|319760578|ref|YP_004124516.1| aspartyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039292|gb|ADV33842.1| aspartyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 576

 Score =  361 bits (927), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 217/587 (36%), Positives = 335/587 (57%), Gaps = 28/587 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           RT  CG L  + +G  + L GW+ ++R  G ++F+++RD  G  QV  +P+     C   
Sbjct: 2   RTAYCGQLNSAHIGLEITLCGWISKLRNLGKLMFIELRDREGSIQVCFDPNFQQEVCKNA 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           + S++ E+ + + G+V +R    IN N++TG IE+ A+   IL+V+E LPL +   +   
Sbjct: 62  SISLKQEFCIQLRGIVRARPITQINKNMLTGMIEIVAKFFVILNVSEPLPLDI--TKNNT 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR  +  NI  R+R+++     M  E F    TPILT S+PEGARD+L
Sbjct: 120 EENRLKYRYLDLRRPIMLLNIKTRSRVMSLTHRFMELEGFFNIDTPILTKSTPEGARDYL 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++    YALPQ+PQ +KQLLM +GFDRY+QI  CFRDED RSDR P EF Q+DME 
Sbjct: 180 VPSRLHIDKKYALPQSPQIFKQLLMIAGFDRYYQITKCFRDEDLRSDRQP-EFTQIDMEA 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++   I   ME  +  V+ E  N       F +I Y D++RR+G+D PDLRNPI + +
Sbjct: 239 SFIDAKRIRELMEFFICTVWREILNIEL--GVFPQISYFDSMRRFGSDTPDLRNPIEIVD 296

Query: 302 VTEHF--VHSEFRVFSKIL---SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           V++ F  + ++F + +KI+   +VN       I  K   G      ++N++     + G+
Sbjct: 297 VSDFFRSIWNQF-LLNKIMIDIAVNQ-----VIVMKIPNGYFLTDKQINKYEDYIRRCGI 350

Query: 357 AYIFWRL----DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD--PLKFC 410
              +W      D+   V   GP+ K LN +  +A+  +++ +     FF+ G+   L   
Sbjct: 351 QNFYWIKAQCNDQKEIVKVDGPIVKFLNKIILKALFKKINFKHNGVLFFVFGNNKNLFIT 410

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESL 469
                 R  I  +L +I  + +   W+++FP ++ NE    I   H+ FT P+   +E L
Sbjct: 411 KILGSLRQKIGSDLNLIKKDTWAPLWVVNFPVFKKNELGSLIP-VHHMFTAPKNCDIEFL 469

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
           K N LL++    YD+V NG+EI SG +R H   +    F  +GIS+   + +FG L  A 
Sbjct: 470 KNNPLLAVSE-AYDMVINGYEIGSGSVRIHSYLLQQTIFDILGISRSTQQKKFGCLMNAL 528

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
           + G PPH G+A G+DR++MLL G+K++R+V  FP + +  DL++ +P
Sbjct: 529 KYGAPPHAGLAFGLDRLLMLLTGSKSIRDVIAFPKTTSAIDLMVDAP 575


>gi|261749101|ref|YP_003256786.1| aspartyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497193|gb|ACX83643.1| aspartyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 574

 Score =  360 bits (923), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 214/593 (36%), Positives = 326/593 (54%), Gaps = 23/593 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG+L   D+G  V LSGW+ ++R  G +IF+D+RD +GI Q+V    S    
Sbjct: 1   MHYYRTHNCGELCKKDIGKKVILSGWIQKIRNLGSLIFIDLRDFFGIIQLVF---SKKLI 57

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +R E+V+ I G V+ R  ++IN  I TG+IE+   ++EIL+ +  LP  +  + + 
Sbjct: 58  NKIELRKEFVIKISGEVIKR--KSINQKIPTGEIEVLVSRLEILNPSIPLPFLIEDQTDG 115

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LD+RR+ +  N++ R  I    R  +    F+E  TP+L   +PEGAR F
Sbjct: 116 DEECRMKYRYLDIRRNPIKNNLILRHEISLETRNFLSKNGFLEIETPVLINQTPEGARSF 175

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR++ G FYALPQ+PQ +KQLLM  G D+YFQIA CFRDED RSDR   EF Q+D E
Sbjct: 176 VVPSRIHSGMFYALPQSPQLFKQLLMIGGIDKYFQIAKCFRDEDARSDR-QIEFTQIDCE 234

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FV+  DIL   EN ++ +F++  N    S  F  I Y +++  YGTD PDLR  +   
Sbjct: 235 MAFVDVHDILIFFENFIKHLFKKIKNIELES--FTCISYSNSMDLYGTDSPDLRFGMKFV 292

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL--AY 358
            + E +   +   F K   +  G  V          +   C+++        +P +    
Sbjct: 293 KLNE-WAQKKGIEFLKKKELTIGINV-------PKCSHYTCNQIYSIIEGIREPKINPEE 344

Query: 359 IFW-RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           IFW +      +     +  H N++  + I+     + GD  F I G   K  +  +  R
Sbjct: 345 IFWIKFFTDKTILSSKKLLSHENLM--KLIKC-FKAKPGDLLFIIFGKKRKTRAKLSKLR 401

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLS 476
             +A  L + N   F+  WI+D P  EW+E+ K+    H+PFT P +  +  L   +   
Sbjct: 402 IEMAHHLNLKNPQVFKPLWIIDLPLLEWDEKSKRYKSFHHPFTSPIKEDIHLLDKKNPGY 461

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I+   Y+L+ NG EI  G IR H   +    F ++G S + +E+ FG L +AF+ G PPH
Sbjct: 462 IRTKSYELIINGMEIGGGSIRVHDKNIQDSIFKHLGFSIKDIESEFGFLTKAFEYGTPPH 521

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           GGIA G+DR++ +L G +N+++   FP + +  D ++ +P  +  E+L+EL L
Sbjct: 522 GGIAFGLDRLITILEGKENIKDFIAFPKNNSGRDTMVNTPYFLKKEKLKELRL 574


>gi|328945671|gb|EGG39822.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 578

 Score =  359 bits (922), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 196/583 (33%), Positives = 325/583 (55%), Gaps = 12/583 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N  I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKAIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNDLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++   ++  F  I Y++A+ R+G+DKPD R  + +  +T+    
Sbjct: 245 IRALVEAMLKAVVKK-THSLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKTLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++    +++ + +   + G +       E+G 
Sbjct: 304 NDSLLIKKALDNQEKVMGICVPDAASAFSKK---QLSHYYQEMKEFGCSRFANLKVENGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +G +A       ++ +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 L--VGDLASTFE-AESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  E NE++ +    H+PFT  QG  E  +  D    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLERNEDQNRYQAMHHPFT--QGIFEDRQEPD--QFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +L G +N+R+V  FP +    D ++ SPS V + QL+EL L +
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDLRQLKELHLEL 576


>gi|85057873|ref|YP_456789.1| aspartyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|97196521|sp|Q2NIN3|SYD_AYWBP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|84789978|gb|ABC65710.1| aspartyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 576

 Score =  359 bits (922), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 216/602 (35%), Positives = 337/602 (55%), Gaps = 42/602 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M    ++    L +   G  V L G++ R R  G  +F D+RD  GI Q++   ++  ++
Sbjct: 1   MKTKYSYYNNQLTLIHQGKIVFLKGFIFRKRNLGKTLFFDLRDVSGIVQLLVKENNPQYD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               ++ E V+ I G V+ R  +  N ++ TG IE+    IEILS A+ LPL VF  +E 
Sbjct: 61  KIALIKLETVVQIKGQVIERINK--NPDLPTGDIEILVSHIEILSEAQTLPLNVFQSQES 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLR   +   +++R  I  S+R  ++  +F+E  TPIL+ S+PEGARD+
Sbjct: 119 LEETRLKYRYLDLRNPEVKHFLIQRHHITQSIRQTLLKNDFLELETPILSKSTPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+  G+FYALPQ+PQ +KQL M +GF+RYFQ+A CFRDED RSDR P EF Q+D+E
Sbjct: 179 LVPSRIYPGNFYALPQSPQLFKQLYMIAGFERYFQVARCFRDEDLRSDRQP-EFSQIDIE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ QD+I++  E ++  +F        +   FLR+ Y  A   YG+DKPDLRNP+ + 
Sbjct: 238 TSFLNQDEIMSLTEEIIVDLFANIWK-KPLLQPFLRLTYQQAFELYGSDKPDLRNPLKIT 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR-AFCDR--MNEWARSQGQPGLA 357
           + T  F  + +              ++A   KG   ++ AF  R  ++E+          
Sbjct: 297 DFTTFFDTNTY-----------SQNIFAGKIKGFKVSKTAFLTRRKLDEYQ--------- 336

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD--MQDGDSCFFIAGDPLKFCSFAAD 415
            +F+   +  N+     V K+  I+   +  ++ D  +++ + CF ++G           
Sbjct: 337 -LFF--SKHFNLKLFSFVKKNDKIIGGISQFIQDDSFLKNEEICFVVSGKKDIIHKALGI 393

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE----KKIDFAHNPFTMPQGGMESLKG 471
            R  +A +L +++       WI+DFP +E  +E+     ++   H+PFT P+     LK 
Sbjct: 394 FRTKLALDLSLVDTTQEALLWIVDFPLFETIQEDLSPPNRLYSLHHPFTAPRDAT-ILKS 452

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIR--NHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
           N   ++ A  YDLV NG+E+  G +R  NH ++ ++  FS +G  +E V+NRFG L  A 
Sbjct: 453 NPQKAL-ANAYDLVWNGYEVGGGSLRINNHQTQELI--FSLLGFLQEEVQNRFGFLIEAL 509

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGGIA G+DR+VML     N+++V  FP +Q+  DL++ +PS V+ EQL  L L
Sbjct: 510 KYGTPPHGGIALGLDRLVMLFTKTNNIKDVIAFPKTQSAKDLMLEAPSAVNQEQLNTLKL 569

Query: 590 RI 591
           ++
Sbjct: 570 QL 571


>gi|94501012|ref|ZP_01307536.1| aspartyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94426759|gb|EAT11743.1| aspartyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 515

 Score =  359 bits (922), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 197/517 (38%), Positives = 304/517 (58%), Gaps = 8/517 (1%)

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +V +R A + N N+ TG+IE+  ++I +L+ A   P P+       E +R +YR++DLRR
Sbjct: 1   MVRARPAGSENENMPTGKIEVLGKEITVLNKAATPPFPLDEYSPVGEDVRLRYRYMDLRR 60

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           D +  N+  R ++   +R  +  + F++  TPILT ++PEGARD+LVPSR +QGSF+ALP
Sbjct: 61  DEMQHNLRFRHKVTTQIRNILDEQGFLDIETPILTRATPEGARDYLVPSRTHQGSFFALP 120

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+DME SFVE+ DI+   E+
Sbjct: 121 QSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDMEASFVEEKDIMGAAES 179

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           +++ +F+  +        F  + Y +A+ +YG+DKPDLR P+ + +V +     EF+VF+
Sbjct: 180 MIKQIFQ--TQKGIDLGEFPHMPYSEAMNKYGSDKPDLRIPMELVDVADLLQDIEFKVFA 237

Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374
              + +P   V A+   GG   +R   D   ++    G  GLA+I     E G      P
Sbjct: 238 GP-AKDPKGRVAALKVPGGAELSRKQIDEYTKYVGIYGAKGLAWIKVNEIEKGVEGLQSP 296

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
           + K +   NT  I  RL++++GD  FF A   +         R  +  +L ++ C  +  
Sbjct: 297 IIKFIGDDNTMKIMDRLEVKNGDIVFFGADKEVIVNEALGALRVKLGHDLNMLTCE-WAP 355

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            W++DFP +E   E+ K+   H+PFT P    E LK N   ++ +  YD+V NG E+  G
Sbjct: 356 LWVVDFPMFE-ELEDGKLHAIHHPFTAPSCSPEELKANPTAAL-SRAYDMVLNGCELGGG 413

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            IR H   +    F  + IS+E    +FG L  A Q G PPHGG+A G+DR++ML+ G++
Sbjct: 414 SIRIHDQAMQQTVFEILNISEEEQREKFGFLLDALQFGAPPHGGLAFGLDRLIMLMTGSE 473

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           ++REV  FP +Q+   ++  +P  V  + LRE+G+++
Sbjct: 474 SIREVIAFPKTQSAACVMTDAPGEVPTKNLREVGIQL 510


>gi|159473653|ref|XP_001694948.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii]
 gi|158276327|gb|EDP02100.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii]
          Length = 714

 Score =  359 bits (921), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 214/621 (34%), Positives = 332/621 (53%), Gaps = 35/621 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H CG +  +D+GS V + GWV R R  GG+ F D+RDH G+ QV+  P S   E++++
Sbjct: 100 RSHGCGAVTTADIGSKVTICGWVDRNRDMGGVQFFDVRDHSGLLQVICEPQSVAPEVSRT 159

Query: 65  ---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPV--FGER 118
              +R+E+V+C+ G++ +R  +  N  I TGQ+E+ A+ ++IL+V    LP P+    E+
Sbjct: 160 ASRLRNEYVVCVKGVLRAR--KDPNPKIPTGQLEVLAESVDILNVVTRSLPFPISEAEEQ 217

Query: 119 EYP-ESIRFKYR-FLDLRRDTLHKNIVKRTRIINSMRCRMIA------------------ 158
           E P E  R K R  LD        +        +  R +M A                  
Sbjct: 218 EPPKEDTRLKNRPSLDPHLPAPDPDPTSLPTPSSPSRPKMAANLRLRHKLLRLIRTFLED 277

Query: 159 -ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
              F+E  TPILT S+PEGARD+LVPSRV  G +YALPQ+PQ +KQ+LM +G DRY+QIA
Sbjct: 278 RHGFMEVETPILTRSTPEGARDYLVPSRVQPGEWYALPQSPQLFKQMLMVAGMDRYYQIA 337

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
            CFRDED R+DR P EF QLD+E+SF++   + + ME ++  VF++   G T++  F RI
Sbjct: 338 RCFRDEDLRADRQP-EFTQLDIEVSFMDDKALQSLMEELVLQVFDQIL-GVTLAAPFRRI 395

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y +A+ +YG+DKPDLR  +   +V+       F+VF+  ++     +   +P      N
Sbjct: 396 SYAEAMDKYGSDKPDLRYGLEFVDVSPAVAGCGFKVFAGAVADGGVVKAIRVPDGKRISN 455

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
                + +    +           R+   G++     + + L+      +      Q GD
Sbjct: 456 TRIKPKGDIANEAVAAGAAGLASIRVAADGSLDAAKAIKEGLSPEQAAQLMAATGAQPGD 515

Query: 398 SCFFIAGDPLKFCSFAAD-ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
                AG P      A D  R  + ++LG+I        W++DFP +E+N EE +    H
Sbjct: 516 LLLLAAG-PRDTVHRALDRVRQLLGRDLGLIKPGDHSLLWVVDFPMFEFNPEEGRYQAIH 574

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +PFT P+   +     D ++ +A  YDLV NG EI  G +R +  ++  + F  +G++  
Sbjct: 575 HPFTAPR--PDDWASGDYVNARALAYDLVYNGVEIGGGSLRIYRRDIQQKVFELIGLTPA 632

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
             +++FG L   F+ G PPHGG+A G+DR+ MLL GA ++R+V  FP +      L G+P
Sbjct: 633 EAQSKFGYLLDCFEYGAPPHGGLAFGLDRLAMLLAGAPSIRDVIAFPKTTQAQCALTGAP 692

Query: 577 STVSVEQLRELGLRIVENPKK 597
           + V+ +QL EL +     PK+
Sbjct: 693 AAVADKQLVELSIASTAPPKQ 713


>gi|315617911|gb|EFU98509.1| aspartyl-tRNA synthetase [Escherichia coli 3431]
          Length = 553

 Score =  359 bits (921), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 207/556 (37%), Positives = 311/556 (55%), Gaps = 9/556 (1%)

Query: 41  IRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQ 99
           +RD  GI QV  +PD A   ++A  +R+E+ + + G V +R  + IN ++ TG+IE+ A 
Sbjct: 1   MRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLAS 60

Query: 100 KIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE 159
            + I++ A+ LPL         E  R KYR+LDLRR  + + +  R +I + +R  M   
Sbjct: 61  SLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDH 118

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
            F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  C
Sbjct: 119 GFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKC 178

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           FRDED R+DR P EF Q+D+E SF+    +   ME ++R ++ E    +    +F  + +
Sbjct: 179 FRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTF 235

Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NR 338
            +A RRYG+DKPDLRNP+ + +V +     EF VF+   + +P   V A+   GG    R
Sbjct: 236 AEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTR 294

Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398
              D    + +  G  GLAYI       G      PVAK LN    E I  R   QDGD 
Sbjct: 295 KQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEDILDRTAAQDGDM 354

Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
            FF A +           R  + ++LG+ + + +   W++DFP +E ++ E  +   H+P
Sbjct: 355 IFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHP 413

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           FT P+    +       +  A  YD+V NG+E+  G +R H  ++    F  +GI++E  
Sbjct: 414 FTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQ 473

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
             +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+  +PS 
Sbjct: 474 REKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSF 533

Query: 579 VSVEQLRELGLRIVEN 594
            +   L EL +++V+ 
Sbjct: 534 ANPTALAELSIQVVKK 549


>gi|283852906|ref|ZP_06370167.1| aspartyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283571735|gb|EFC19734.1| aspartyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 467

 Score =  358 bits (919), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 196/469 (41%), Positives = 283/469 (60%), Gaps = 14/469 (2%)

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  L  N + R + + S+R  +    F+E  TP+LT S+PEGARDFLVP
Sbjct: 2   LRLKYRYLDLRRPKLAANFLLRHKAVQSIRRYLDTLGFLEVETPVLTKSTPEGARDFLVP 61

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+  G+FYALPQ+PQ +KQLLM SGFDRY+Q+  CFRDED R+DR P EF Q+D+EMSF
Sbjct: 62  SRMTNGAFYALPQSPQLFKQLLMMSGFDRYYQVVKCFRDEDLRADRQP-EFTQVDIEMSF 120

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+++ ++N  E ++R +F+E ++   + + F R+ + +AIR YG DKPD+R  + + +V+
Sbjct: 121 VDEEQVMNMAETMVRTMFKEAAD-IALPDVFPRMTFAEAIRDYGLDKPDIRFGLKLVDVS 179

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
                S+F+VF+K   V  G  V    A G   +R   D + E+ +  G  GLA+I  + 
Sbjct: 180 PIVRESQFQVFAKAELVK-GIRV----AGGAALSRKEIDDLTEFVKIYGAKGLAWIKIKE 234

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           DE  +     P AK L+    + +   LD++ GD  FF AG P    +     R  + + 
Sbjct: 235 DEWQS-----PFAKFLSDAERQGLIEALDIEVGDIVFFQAGAPDMVNTALGYLRIQLGER 289

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQY 482
            G+I    F   W+ DFP  E++ E K+    H+PFT PQ G +E L      ++ +  Y
Sbjct: 290 FGLIPEGTFAPVWVTDFPLLEYDPEAKRYAARHHPFTAPQPGNLERLADAPAEAL-SRAY 348

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG EI  G IR H  E     F+ +GI     E++FG L RA + G PPHGGIA G
Sbjct: 349 DLVLNGSEIGGGSIRIHDRETQKAMFAVLGIEAGEAEDKFGFLLRALEYGAPPHGGIAFG 408

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR++M+L GAK++R+V  FP +Q    +L  +P  V+  QLRELG+++
Sbjct: 409 LDRLIMILSGAKSIRDVIAFPKTQKAMCMLTEAPGEVATAQLRELGIKL 457


>gi|262340803|ref|YP_003283658.1| aspartate-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272140|gb|ACY40048.1| aspartate-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 567

 Score =  358 bits (919), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 217/593 (36%), Positives = 319/593 (53%), Gaps = 33/593 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIA 62
           YRTH+CG+L   D+G  V LSGW+ + R  G + F+DIRD++GITQ++ + +    F + 
Sbjct: 2   YRTHNCGELCKKDIGKEVVLSGWIQKKRNLGSLCFIDIRDYFGITQLIFSKNLIEKFFLG 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K    E+++ I G V+ R ++  N NI TG+IE+S  +IEIL+ +   P  +  + +  E
Sbjct: 62  K----EFLIKIQGKVVERISK--NNNIPTGEIEISVSQIEILNSSLPTPFTIENQTDGNE 115

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LD+RR+ +  N++ R  +   +R  +    F+E  TP+L   +PEGAR F+V
Sbjct: 116 EIRMKYRYLDIRRNPIKNNLIIRHNLALEIRNFLSQNGFLEIETPVLINYTPEGARSFVV 175

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + G FYAL Q+PQ +KQLLM  G D+YFQI  CFRDED RSDR   EF Q+D EMS
Sbjct: 176 PSRTHVGKFYALAQSPQLFKQLLMIGGIDKYFQIVKCFRDEDARSDR-QIEFTQIDCEMS 234

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPIIMH 300
           FVE DD+L   EN ++ +F    N    S  F  I Y DA++ YGTD PD+R   P I  
Sbjct: 235 FVEVDDVLIFFENFIKHLFRRIKNIQLES--FPCISYSDAMKMYGTDSPDIRFGMPFIEL 292

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           N   + V  +   F K   +  G +V               D+MN   +    P + +I 
Sbjct: 293 N---NLVQKKNISFLKEQELIIGIKVPKCHKNH--------DQMNSLFKKIENPNIFWIQ 341

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRV---RLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +       ++    ++ + +  + E I +         GD  F   G            R
Sbjct: 342 Y-------LSNKTLLSSNPDFFSEEIITIFINHFQAVPGDLLFISYGKRKNTRKTLGKVR 394

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IA  L + N   F+  W+ D P  EW+E  K+    H+PFT P+     L      +I
Sbjct: 395 LEIANHLNLKNSKIFKPLWVTDLPLLEWDERSKRYKSVHHPFTSPKKEDIHLLEKYPENI 454

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           ++  YDL+ NG EI SG IR H   +    F ++G+S + +E+ FG   ++F+ G PPHG
Sbjct: 455 RSQSYDLIINGIEIGSGSIRIHNQNIQNLIFKHLGLSAKEIESEFGFFIKSFEYGTPPHG 514

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           GIA G+DR++ LL G  +++    FP S    DL+  +PS +  E+L+EL LR
Sbjct: 515 GIAFGLDRLINLLEGNDDIKNFIAFPKSNYGEDLMTKAPSFLKKEKLKELHLR 567


>gi|302798054|ref|XP_002980787.1| hypothetical protein SELMODRAFT_154078 [Selaginella moellendorffii]
 gi|300151326|gb|EFJ17972.1| hypothetical protein SELMODRAFT_154078 [Selaginella moellendorffii]
          Length = 555

 Score =  358 bits (918), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 216/539 (40%), Positives = 310/539 (57%), Gaps = 24/539 (4%)

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF----GERE 119
           +R E+V+ ++G V SR     N N+ TG +E+ A K+E+L+ V+  LP  V      +  
Sbjct: 22  LRIEYVVAVEGTVRSRPQGAANTNLKTGSVEIIADKVEVLNPVSLNLPFLVTPLDQSKNV 81

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGA 177
             E +R +YR LDLRR  L+ N+  R RI+  MR R + +   F+E  TPIL+ S+PEGA
Sbjct: 82  ISEEVRLRYRHLDLRRPQLNANLRLRHRIVKLMR-RYLEDVHGFVEVETPILSRSTPEGA 140

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV   +FYALPQ+PQ +KQ+LM SGFDRYFQ A CFRDED R+DR P EF QL
Sbjct: 141 RDYLVPSRVQPATFYALPQSPQLFKQMLMVSGFDRYFQFARCFRDEDLRADRQP-EFTQL 199

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DME++F   +D+L   E+++R VF E   G  + + F R+ Y +A+ +YG+DKPD R  +
Sbjct: 200 DMELAFTPLEDMLELNEDLIRLVFREI-KGVELPDPFPRLTYAEAMSKYGSDKPDTRFGM 258

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG----GNRAFCDRMNEWARSQGQ 353
            +  +++ F  S F  F+   +++ G  V AI   GGG      R     + + A   G 
Sbjct: 259 QLVELSDVFEKSSFAPFAT--AISEGGVVKAITVCGGGKSITATRLKKGDIYQEAVRCGA 316

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
            GL   F ++ E G V G   +   L+   T +    + D + GD   F  G      + 
Sbjct: 317 KGLP--FLKVAEGGEVEGSTALKSSLSCPETRDNFLAKCDAKPGDVIIFANGPTSLVNAT 374

Query: 413 AADARNHIAQEL-GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
               R  IA+    +I+ +  +  WI DFP +EWN+ EK+++  H+PFT P+   E +K 
Sbjct: 375 LGRLRTLIAETSDNLIDKSRNDILWITDFPMFEWNDTEKRLEALHHPFTAPRP--EDMK- 431

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            DL S +A  YD+V NG EI  G +R H  +V  +     G+S +  E++FG L  A + 
Sbjct: 432 -DLSSARALAYDMVYNGVEIGGGSLRIHRRDVQQKVLEASGLSAQEAEDKFGYLLEALEL 490

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G PPHGGIA G+DR+VMLL G K++R+V  FP +      L  +PSTV   QL+EL L+
Sbjct: 491 GAPPHGGIAYGVDRLVMLLAGEKSIRDVIAFPKTTAAHCSLTRTPSTVDPRQLQELRLQ 549


>gi|302756879|ref|XP_002961863.1| hypothetical protein SELMODRAFT_140340 [Selaginella moellendorffii]
 gi|300170522|gb|EFJ37123.1| hypothetical protein SELMODRAFT_140340 [Selaginella moellendorffii]
          Length = 555

 Score =  358 bits (918), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 216/539 (40%), Positives = 309/539 (57%), Gaps = 24/539 (4%)

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF----GERE 119
           +R E+V+ ++G V SR     N N+ TG +E+ A K+E+L+ V   LP  V      +  
Sbjct: 22  LRIEYVVAVEGTVRSRPQGAANTNLKTGSVEIIADKVEVLNPVTLNLPFLVTPLDQSKNV 81

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGA 177
             E +R +YR LDLRR  L+ N+  R RI+  MR R + +   F+E  TPIL+ S+PEGA
Sbjct: 82  ISEEVRLRYRHLDLRRPQLNANLRLRHRIVKLMR-RYLEDVHGFVEVETPILSRSTPEGA 140

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV   +FYALPQ+PQ +KQ+LM SGFDRYFQ A CFRDED R+DR P EF QL
Sbjct: 141 RDYLVPSRVQPATFYALPQSPQLFKQMLMVSGFDRYFQFARCFRDEDLRADRQP-EFTQL 199

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DME++F   +D+L   E+++R VF E   G  + + F R+ Y +A+ +YG+DKPD R  +
Sbjct: 200 DMELAFTPLEDMLELNEDLIRLVFREI-KGVELPDPFPRLTYAEAMSKYGSDKPDTRFGM 258

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG----GNRAFCDRMNEWARSQGQ 353
            +  +++ F  S F  F+   +++ G  V AI   GGG      R     + + A   G 
Sbjct: 259 QLVELSDVFEKSSFAPFAT--AISEGGVVKAITVCGGGKSITATRLKKGDIYQEAVRCGA 316

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
            GL   F ++ E G V G   +   L+   T +    + D + GD   F  G      + 
Sbjct: 317 KGLP--FLKVAEGGEVEGSTALKSSLSCPETRDNFLAKCDAKPGDVIIFANGPTSLVNAT 374

Query: 413 AADARNHIAQ-ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
               R  IA+    +I+ +  +  WI DFP +EWN+ EK+++  H+PFT P+   E +K 
Sbjct: 375 LGRLRTLIAETSENLIDKSRNDILWITDFPMFEWNDAEKRLEALHHPFTAPRP--EDMK- 431

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            DL S +A  YD+V NG EI  G +R H  +V  +     G+S +  E++FG L  A + 
Sbjct: 432 -DLSSARALAYDMVYNGVEIGGGSLRIHRRDVQQKVLEASGLSAQEAEDKFGYLLEALEL 490

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G PPHGGIA G+DR+VMLL G K++R+V  FP +      L  +PSTV   QL+EL L+
Sbjct: 491 GAPPHGGIAYGVDRLVMLLAGEKSIRDVIAFPKTTAAHCSLTRTPSTVDPRQLQELRLQ 549


>gi|242056369|ref|XP_002457330.1| hypothetical protein SORBIDRAFT_03g005710 [Sorghum bicolor]
 gi|241929305|gb|EES02450.1| hypothetical protein SORBIDRAFT_03g005710 [Sorghum bicolor]
          Length = 507

 Score =  356 bits (914), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 198/510 (38%), Positives = 294/510 (57%), Gaps = 24/510 (4%)

Query: 92  GQIELSAQKIEIL-SVAEELPLPVF----GEREYPESIRFKYRFLDLRRDTLHKNIVKRT 146
           G +++ A  + +L SV   LP PV      + ++PE IR ++R LDLRR  +  N+  R 
Sbjct: 5   GTLKVVADHVLVLNSVTRSLPFPVTIADTVKEKFPEEIRLRFRVLDLRRPQMQSNLRLRH 64

Query: 147 RIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
            ++  +R  +  E+ F+E  TP+L+ S+PEGARD+LVPSRV  G+FYALPQ+PQ +KQ+L
Sbjct: 65  NVVKLIRRYLEDEHEFVEIETPVLSKSTPEGARDYLVPSRVQPGTFYALPQSPQLFKQML 124

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           M SGF++Y+QIA CFRDED R+DR P EF QLDME++F   +D+L   E+++R VF+   
Sbjct: 125 MVSGFEKYYQIARCFRDEDLRADRQP-EFTQLDMEIAFTSMEDMLKLNEDLMRHVFQVVG 183

Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
           +   + N F R+ Y +A+ RYGTD+PDLR    + +V++ F+ S F+VF+  L      +
Sbjct: 184 DIK-LPNPFPRLTYAEAMDRYGTDRPDLRFDWELKDVSDVFLGSNFKVFADTLENGGVIK 242

Query: 326 VWAIPAKGGGGNRAFCD------RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
              +P    GG   F +       +   A   G  GL   F ++ ++G + G+GP+   L
Sbjct: 243 ALCVP----GGAAVFSNTDLKKGTVYTEASKAGAKGLP--FLKVMDTGELEGIGPLVSSL 296

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
                E +   LD + GD   F  G+           R  IA +L +I+ +     W+ D
Sbjct: 297 KPEKKEQLVELLDAKAGDLILFALGEQSSANRILGRLRLFIAHKLEVIDTSAHSVLWVTD 356

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           FP +EWN +E++ +  H+PFT P    E +  NDL S +A  YD++ NG EI  G +R +
Sbjct: 357 FPMFEWNSDEQRYEALHHPFTAPNP--EDM--NDLPSARALAYDMIYNGVEIGGGSLRIY 412

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
            S+V  + F  +GIS E  E +FG L   F  G PPHGGIA G+DR+VMLL G  ++R+V
Sbjct: 413 KSDVQQRIFEIIGISPEQAEEKFGYLLECFDMGAPPHGGIAYGLDRLVMLLAGESSIRDV 472

Query: 560 SLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
             FP +      L  +PS V  +QL++L  
Sbjct: 473 IAFPKTTTAQCALTKAPSAVDPQQLKDLAF 502


>gi|3549678|emb|CAA20589.1| putative aspartate--tRNA ligase [Arabidopsis thaliana]
 gi|7270325|emb|CAB80093.1| putative aspartate--tRNA ligase [Arabidopsis thaliana]
          Length = 636

 Score =  353 bits (907), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 221/598 (36%), Positives = 324/598 (54%), Gaps = 50/598 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG+L V+DVG  V L GWV   R HGG+ FL++RDH GI QV   PD       + 
Sbjct: 75  RTELCGELSVNDVGKRVHLCGWVALHRVHGGLTFLNLRDHTGIVQVRTLPDEFPEAHGLI 134

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGERE-- 119
             +R E+V+ ++G V SR  E++N  + TG +E+ A+ +EIL+ V  +LP  V    E  
Sbjct: 135 NDMRLEYVVLVEGTVRSRPNESVNKKMKTGFVEVVAEHVEILNPVRTKLPFLVTTADENK 194

Query: 120 --YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPE 175
               E IR ++R LDLRR  +  NIV R  ++  +R R + +   FIE            
Sbjct: 195 DLIKEEIRLRFRCLDLRRQQMKNNIVLRHNVVKLIR-RYLEDRHGFIES----------- 242

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                        G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF 
Sbjct: 243 -------------GTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFT 288

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           QLDMEM+F+  +D+L   E+++R VF E   G  + + F R+ Y DA+ RYG+D+PD R 
Sbjct: 289 QLDMEMAFMPMEDMLKLNEDLIRKVFSEI-KGIQLPDPFPRLTYADAMDRYGSDRPDTRF 347

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAF--CDRMNEWARSQG 352
            + + +V    + S   VF++ L      +V  +P       N A    D  NE  +S G
Sbjct: 348 DLELKDV----ILSTSWVFTEALESGGIIKVLCVPLGAKKYSNSALKKGDIYNEAMKS-G 402

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
             GL   F ++ ++G + G+  +   L+         +     GD   F  G        
Sbjct: 403 AKGLP--FLKVLDNGEIEGIAALVSSLDSAGKINFVKQCGAAPGDLILFGVGPVTSVNKT 460

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               R  +A ++ +I+ +     W+ DFP +EWNE E++++  H+PFT P+   E +  +
Sbjct: 461 LDRLRLFVAHDMDLIDHSKHSILWVTDFPMFEWNEPEQRLEALHHPFTAPKP--EDM--D 516

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DL S +A  YD+V NG EI  G +R +  +V  +    +GIS E  E++FG L  A   G
Sbjct: 517 DLPSARALAYDMVYNGVEIGGGSLRIYKRDVQEKVLEIIGISPEEAESKFGYLLEALDMG 576

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            PPHGGIA G+DR+VM+L GA ++R+V  FP +      L  +PS V  +QL++L +R
Sbjct: 577 APPHGGIAYGLDRMVMMLGGASSIRDVIAFPKTTTAQCALTRTPSEVDPKQLQDLSIR 634


>gi|121591625|ref|ZP_01678871.1| aspartyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121546519|gb|EAX56729.1| aspartyl-tRNA synthetase [Vibrio cholerae 2740-80]
          Length = 540

 Score =  353 bits (906), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 216/550 (39%), Positives = 316/550 (57%), Gaps = 15/550 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK L     +AI  R   Q GD   F   D  K  + A  A R    
Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +ELGI N + +   W++DFP +E +++E  +   H+PFT P     E LK N   ++ + 
Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEAL-SN 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H +E+    F  +GI+ E     +    R  + G      +A
Sbjct: 473 AYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPESTSQVWFP-ARCAEVGTHTR-SLA 530

Query: 541 AGIDRIVMLL 550
            G+DR+VMLL
Sbjct: 531 FGLDRLVMLL 540


>gi|240047691|ref|YP_002961079.1| Aspartyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985263|emb|CAT05276.1| Aspartyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 571

 Score =  353 bits (906), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 212/588 (36%), Positives = 321/588 (54%), Gaps = 67/588 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR+ GW    R      F+++RD++GI QVV   D A  EI K    E V+ + G V+ R
Sbjct: 17  VRIFGWASNFRKFKDKTFIELRDYWGIVQVVVPKDIAHSEIKK----ESVISVYGTVVIR 72

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           S   IN  I  G +E+ A+KIE++S A ELP  +  +    E +R +YRFLDLRR+ + +
Sbjct: 73  S--NINNKIPNGNLEIIAEKIELISPANELPFEIQDDINANEDLRLEYRFLDLRRNEMKQ 130

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           N++ R + I+ +R  +   +F+E  TPIL+ S+PEGAR F+VP+R  Q  F+ALPQ+PQ 
Sbjct: 131 NLIFRYKFIHQIRQFLYENDFVEIETPILSKSTPEGARSFIVPTR-KQNHFFALPQSPQL 189

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           YKQLLM SGF+RYFQ A  FRDED R DR   EF QLDME +F   + I   +E +++  
Sbjct: 190 YKQLLMVSGFNRYFQFARAFRDEDLRKDR-QFEFTQLDMEFAFPTIESIQKNIEQLVKHS 248

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE---------------- 304
             +F      + +F +I Y +AI +YG+DKPDLR    + + +E                
Sbjct: 249 LRKFD--FQFNEDFPQISYKEAIDKYGSDKPDLRFKNYLIDASELDDDQEFLFSGKTKVV 306

Query: 305 -----HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
                H    ++++ S+I+  N    +  I  K             ++   + QP L   
Sbjct: 307 FLENKHISKQDYKILSEIIVQNKANRLLYIHIKNANV---------DFYSFKTQPSL--- 354

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RN 418
              +D+  N      V+KH               Q+G    FI  D  +  + +  A RN
Sbjct: 355 ---VDKISNF-----VSKH-------------QFQNG--TLFIVSDSYEKTTQSLGALRN 391

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IAQ   +I+ +  +F WI+D+P +E +EE +KI  AH+PFTM       L  ++ L+ +
Sbjct: 392 KIAQMYDLIDTSSLKFAWIIDWPMFEKDEETQKISAAHHPFTMVDKESVYLLDSNPLAAR 451

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NGFEI  G IR    ++  + F  +G+S++  + +FG L +AF  G+PPHGG
Sbjct: 452 AQAYDLVLNGFEIGGGSIRIVDKKIQEKIFKIIGLSEQEAKQQFGFLLKAFSYGVPPHGG 511

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            A G+DR +M+L  A ++R+V  FP++    D+L+ SP+ ++ +QL+E
Sbjct: 512 FAFGLDRFIMILRNASSIRDVIAFPVNSKGQDMLLSSPTNLTNQQLQE 559


>gi|15828803|ref|NP_326163.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase) (AspRS)
           [Mycoplasma pulmonis UAB CTIP]
 gi|14089746|emb|CAC13505.1| ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LIGASE) (ASPRS)
           [Mycoplasma pulmonis]
          Length = 578

 Score =  353 bits (906), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 205/598 (34%), Positives = 329/598 (55%), Gaps = 46/598 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           + +   ++   +VG  + L GW+   R  G + F+D+RD +GI Q+V +       +   
Sbjct: 14  KKYKNNEITSKNVGEELTLFGWIQNERKFGKLTFIDLRDMHGIIQIVFD------NLTSK 67

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E +L + G V+ R  +  N N+ +G+IE+   + E+L+ ++ELP  +  +    E  
Sbjct: 68  LGFETILKVKGKVVLRKEK--NPNLQSGEIEVHVSEYEVLNTSKELPFLIRDDDNSKEET 125

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + +YRFLDLR+    K I+ R++ IN++R  +I  +F+E  TPIL+ S+PEGARDFLVP+
Sbjct: 126 KLQYRFLDLRKPINTKKIIFRSKFINALRTFLIENDFVEIETPILSKSTPEGARDFLVPT 185

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R N+  F++LPQ+PQ YKQLLMASGF+RYFQIA  FRDED R DR P EF QLDME+SF 
Sbjct: 186 R-NKNKFFSLPQSPQLYKQLLMASGFERYFQIARAFRDEDSRKDRQP-EFSQLDMEISFQ 243

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  + +  E +L   FE+ +    +   F R+ +D  ++ YG+DKPDLR  + + ++ +
Sbjct: 244 DEKVLHSITEKMLVYAFEKMNIK--IEAPFERLSFDYVMQNYGSDKPDLRYEVKIQDLKK 301

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  S F + S    +  G  +  I  K           + E A+  G   L   F+   
Sbjct: 302 YFEKSSFEIISSKKFIK-GLFIKEIITKND------FKTLEEIAKKNGANIL---FYSSV 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G ++      K    V  E I     +++G   FFI          A+D  N +   L
Sbjct: 352 EQGKISRTNFANKDKESV--EKIIEDFSIENG--TFFIV---------ASDFENKVLLSL 398

Query: 425 GII-----------NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           G             N + ++F WI+D+P +E++E       +H+PFTM            
Sbjct: 399 GATRVELNSIFKWANKDQYKFAWIIDWPLFEYDENTNTYSPSHHPFTMYDESTLVDGKIS 458

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
               KA  YDLV NG+E+ SG +R +  E+  Q F  + +S++ +E++FG   +AF  G+
Sbjct: 459 YEKTKAKSYDLVLNGYELVSGSVRIYKKEIQAQIFKLLNLSQKEIEDKFGFFLKAFDYGL 518

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPH G+A GI+R++M++  ++++REV  FP + +   L+  +PS VS EQL+E+ L++
Sbjct: 519 PPHCGLAFGIERLIMIMTQSESIREVIAFPKTSSGQALMEDAPSLVSEEQLKEVFLKV 576


>gi|309807578|ref|ZP_07701530.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308169184|gb|EFO71250.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
          Length = 546

 Score =  353 bits (905), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 199/534 (37%), Positives = 311/534 (58%), Gaps = 17/534 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG++        V + GWV RVR  G +IF+D+RD  GI QVV N DS  A  ++A
Sbjct: 4   RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +E+V+ + G V+ RS   +N  I TG++E++A  I +L+ ++  P  +  +    E
Sbjct: 64  QKLGNEYVVEVQGKVVRRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR +L  +I+ R++I++++      E F+   TP L  S+PEGARD+LV
Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S
Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  +    E +L+ V ++   G  +     RI +D+A+ +YG+DKPD+R  + +H++
Sbjct: 241 FLDEKGVQTYTEGLLKKVMKDVM-GIDIVTPIKRITWDEAMNKYGSDKPDIRYDMHLHDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
           ++ F  SEF+VFS  LS   G  +  I  KGG    +R   +   E+ +     G+A++ 
Sbjct: 300 SDIFKDSEFKVFSDTLS--NGGVIKGIAVKGGAEAYSRKKIEEKQEYIKRYHAKGIAWVK 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-ARNH 419
           +   E+G     GP+A+ L       +    ++  G+    IA D  K  + + D  R  
Sbjct: 358 Y---ENGEFT--GPIARFLTENQKRDLISEFELTGGELITIIA-DIWKVVTDSLDYLRRT 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E GII  + F+F W++D+P +E++E +++   AH+PFTMP      L   +     A
Sbjct: 412 FAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             YD+V NG+E+  G IR H  E+  + F  +G +KE    +FG   R+ + G+
Sbjct: 472 RSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFFTRSIRYGI 525


>gi|269986733|gb|EEZ93013.1| tRNA synthetase class II (D K and N) [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
          Length = 591

 Score =  352 bits (902), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 210/587 (35%), Positives = 321/587 (54%), Gaps = 18/587 (3%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           CGDL    V   V L+GW   +R HGG +F+D+ D  GI Q V + D    E AK++  E
Sbjct: 5   CGDLSAELVDKEVTLNGWCRYIRDHGGKLFVDLADRTGIAQAVFDGD--LLEQAKTLGRE 62

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---PESIR 125
           +V+ I GLV  R  ETI+    TG+ E+  + + I++ AE  P  +  E+      E +R
Sbjct: 63  YVIRIKGLVKERDKETIDEQNPTGKFEVIVEDLIIINKAETPPFEITDEKGKFLAAEDLR 122

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-GARDFLVPS 184
            KYR+LDLRR  +  NIV R ++    R       F+E  TP L   + E GAR F+VPS
Sbjct: 123 LKYRYLDLRRTEMISNIVFRDKVTKLARQFFWDNGFLELETPTLVKDTYETGARPFIVPS 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+ +G+FY+LPQ+PQ YKQLLM +G D+YFQ+A  FRDED R DR P EF QLD+E+SF 
Sbjct: 183 RIKKGTFYSLPQSPQIYKQLLMIAGLDKYFQVARAFRDEDQREDRQP-EFTQLDLEVSFK 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++ +E+++  + +   N + +   F R+ Y +AI+RYG+DKPDLR    + ++TE
Sbjct: 242 DESYIMSLIESLIEKILKSIMNED-IKLPFKRLQYGEAIKRYGSDKPDLRYDYEIIDITE 300

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM---NEWARSQGQPGLAYIFW 361
               S + +  ++L      +  +  A  G   R   D M    E A+  G  GL ++F 
Sbjct: 301 SMKKSSYNIIKRVLESGGKVKAASFQADYGKSERITKDFMLNVIEIAKGNGLKGLTWLFV 360

Query: 362 RLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
              E+G +  +   +A  L+ V  E I   L  +DGD   F A  D +         R  
Sbjct: 361 ---ENGKLKSIPEAIAGSLSNVENEII-AALKAKDGDIIIFGADLDEMLLLQALGKVRKV 416

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           I  ++G  +   F F W++DFP +E +   KK++ +HNPFT P      L   +   ++ 
Sbjct: 417 IGDKIGKFSSK-FSFLWVVDFPLFEVDSITKKLNPSHNPFTAPFTDDIKLLEKEPEKVRG 475

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
            Q+DLV NG EI  G +R + +++ L+  + +G+ +E   N FG L  A + G P   G 
Sbjct: 476 RQFDLVLNGNEIGGGAVRINNADLQLKILNMIGMQEEEALNTFGFLINALKFGAPEDIGF 535

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           A G+DR V +L   +++R+  LFP +++F   + GSP+ +  ++L E
Sbjct: 536 AIGLDRFVTILKEKQSIRDFILFPKTKSFESPIDGSPTKIEDKRLLE 582


>gi|238810325|dbj|BAH70115.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 569

 Score =  350 bits (897), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 213/598 (35%), Positives = 318/598 (53%), Gaps = 48/598 (8%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
            +L   D G  V L GWV   R  G + F+D+RD YGITQ V       F+   +V  E 
Sbjct: 9   NELSAKDKGKKVTLHGWVANKRRFGEMTFIDLRDRYGITQCV-------FKTDLNVTKES 61

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKY 128
            + + G V+ R  +  N N+ TG IE+   K  I S A EELP  +  + +  E  R KY
Sbjct: 62  SMEVIGKVVLRKQK--NPNLATGDIEVVVDKYTIFSEANEELPFAIRDDIDVKEETRMKY 119

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           RFLDLRR  + +NI+ + +I+ ++R  M   +FI+  TP+L  S+PEGARDFLVP+R N+
Sbjct: 120 RFLDLRRPVMQQNIITKDKIMFAVREFMHQNDFIDIETPMLAKSTPEGARDFLVPTR-NR 178

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             F+ALPQ+PQ +KQLLM SGF++Y+Q A CFRDED R DR P EF QLD+E SF+  +D
Sbjct: 179 DEFWALPQSPQLFKQLLMCSGFEKYYQFARCFRDEDSRKDRQP-EFTQLDIETSFLNVED 237

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
               +E + + +F+  S G  +   F R+ Y DA+R YGTDKPDLR    + ++ +  ++
Sbjct: 238 FQKYIEKLFKHIFK--SIGIKIKTPFPRVKYFDALRDYGTDKPDLRYDYKIVDINDFCLN 295

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++F +     S    +    I  K       F D + E A+      L Y  +   E+G 
Sbjct: 296 TDFNIIKYAPSKRMLFVDTLITKKD------FKD-LEEIAKKNKANILFYFVY---ENGE 345

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +          N V   A+ +  + ++ +  +FI           A+  +H +Q LG + 
Sbjct: 346 IVHTN----FANKVKDAALELVKNNKNKNGSYFIV----------ANTYDHASQALGAVR 391

Query: 429 CNCFE----------FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
               E            WI D+P +E++EE      AH+PFT     +E L   ++  ++
Sbjct: 392 VELNERFNYARKEWNLSWITDWPMFEYDEENNTWAAAHHPFTRFAHSLEELDKIEMKDVR 451

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NGFE+ SG  R    +   + F  +G+S++  ++RF    +AF  G+PPH G
Sbjct: 452 ALSYDLVLNGFELGSGSARIFDKKTQKKMFDLIGMSEKEQQSRFDWFLKAFDYGIPPHCG 511

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           I  G+DR+ M++ G K +R+V  FP +    D+  G+P +V  +QL EL L I +  K
Sbjct: 512 IGLGLDRLTMIITGQKTIRDVIAFPKNAKNQDVFTGAPGSVDKKQLDELFLEIKKEDK 569


>gi|33519906|ref|NP_878738.1| aspartyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|46577209|sp|Q7VQX8|SYD_BLOFL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33504251|emb|CAD83514.1| aspartyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 576

 Score =  349 bits (896), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 205/582 (35%), Positives = 326/582 (56%), Gaps = 18/582 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG L +S VG  V L GWV++ R  G +IF+D+RD  G  QV  N D+    +  A
Sbjct: 2   RTAYCGQLNLSHVGLEVTLCGWVNKYRNFGKLIFVDLRDREGCIQVYFNSDAQKKTYVRA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             ++ E+ + + G+V SR    IN N+ TG IE+ A+   +L+V+  LPL +   ++  E
Sbjct: 62  ADLKQEFCIQLTGIVRSRPVSQINKNMSTGFIEIEAKFFLVLNVSNPLPLDI--HQDNIE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  +  NI  R+R++      M  E  +   TP+L  S+PEGARD+LV
Sbjct: 120 ENRLKYRYLDLRRPIMFHNIQTRSRVMALTHRFMELEGLLNIDTPVLAKSTPEGARDYLV 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++   +YALPQ+PQ +KQLLM +G DRY+QI  CFRDED RSDR P EF Q+D+E+S
Sbjct: 180 PSRLHINKYYALPQSPQMFKQLLMIAGIDRYYQITKCFRDEDLRSDRQP-EFTQIDVEIS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+    I   ME  +  +++E  N       F +  Y + I R+G+D PDLRNPI M +V
Sbjct: 239 FITAKKIRELMEFFICKLWKEILNVEL--EVFSQFSYAEVISRFGSDSPDLRNPIEMKDV 296

Query: 303 TEHFVHSEFRVF----SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +  F     ++F      + +++    V  +P+ G    R   D+ +++A+  G     +
Sbjct: 297 SSIFQSLGNKLFICNAGCVDTIDTQVIVMNVPS-GFKLTRNEIDKYSDYAKKSGIQQFLW 355

Query: 359 IFWRLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP--LKFCSFAAD 415
           +  ++++   +  + GP+   LN    + +  ++ +++ D  FF   +   L      + 
Sbjct: 356 MKIQMNDCKEITAIDGPIINLLNKNFLQLLMAQVKIENNDILFFGFNNDKNLSTTRMLSA 415

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDL 474
            R+ +  +L ++  + ++  WI+DFP ++ N   K +   H+ FT P+   +  LK N  
Sbjct: 416 LRSKLGYDLNLVKQDSWKPLWIVDFPMFKKNTSGKLVSM-HHMFTAPKDNDLICLKRNPE 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L++    YD+V NG E+ SG +R H  ++    F  +GI++E  + +FG L  A + G P
Sbjct: 475 LAVSE-AYDIVINGCEVGSGSVRIHSYKLQQAMFDILGITRENQQKKFGCLMNALKYGAP 533

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
           PH GIA G+DR+VMLL  + N+R+V  FP +    DL++ +P
Sbjct: 534 PHAGIALGLDRLVMLLTKSNNIRDVIAFPKTTGAMDLMIDAP 575


>gi|71892229|ref|YP_277962.1| aspartyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|97196544|sp|Q492L1|SYD_BLOPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71796335|gb|AAZ41086.1| aspartyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 574

 Score =  349 bits (896), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 215/583 (36%), Positives = 324/583 (55%), Gaps = 22/583 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEI 61
           RT  CG L +S VG  V L GW+++ R  GG+IF+D+RD  G  QV   V      C   
Sbjct: 2   RTAYCGQLNLSHVGLEVTLCGWINKYRNFGGLIFIDLRDREGCIQVCFDVYQNKEVCISA 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK ++ E+ + + G+V +R    IN+NI TG +E+ A+K  IL++++ LPL +   +   
Sbjct: 62  AK-LKQEFCIQLIGMVRARPKNQINSNISTGAVEVVAKKFSILNISDPLPLDI--SKNNI 118

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR  +   I  R+RI++ +   M  E F+   TP+LT  +PEG+RD++
Sbjct: 119 EENRLKYRYLDLRRSIMFDRIKTRSRIMSIVHRFMELEGFLNIETPMLTKVTPEGSRDYI 178

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ G  YALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E 
Sbjct: 179 VPSRLHAGKNYALPQSPQIFKQLLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDIET 237

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+    I   ME  +R ++ E  N       F +  Y + ++R+G+D PDLRNPI M +
Sbjct: 238 SFMTTQKIRELMEIFIRIIWREILNVEL--GVFSQFTYSEVMQRFGSDAPDLRNPIEMFD 295

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V+  F  ++ R+ S I + N G  V AI  K   G +    +++E+     Q GL  + W
Sbjct: 296 VSYLFNSTQNRL-SFIRANNIG--VQAIAMKVPNGRQLTQKQIDEYIYYSKQCGLKELLW 352

Query: 362 -RLDESGNVAG----MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK--FCSFAA 414
            ++  S N        G V   ++ +  + I  + +++  D  F    D          +
Sbjct: 353 VKVQFSDNDITKKEIQGSVTNFIDNLTLDIILNKTNIKSNDILFVGFNDNKNQFITKMLS 412

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGND 473
             R  +  +L +I  + +   WI+DFP ++ N   +     H+ FT P+   ++ LK + 
Sbjct: 413 ALRLKLGNDLCLIKKDSWAPLWIIDFPMFKKNCHGEYTSM-HHMFTSPKNCDVQMLKKDP 471

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           LL I    YD+V NG EI SG  R H  ++    F+ +GI++   + +FG    A + G 
Sbjct: 472 LLVISE-AYDMVINGCEIGSGSARIHSFDMQQAVFNILGITQNDQKKKFGYFMDALKYGA 530

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
           PPH G+A G+DRI MLL G+KN+REV  FP +    D++  +P
Sbjct: 531 PPHAGLAFGLDRIAMLLTGSKNIREVIAFPKTTASVDIMANAP 573


>gi|144575341|gb|AAZ53617.2| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 567

 Score =  347 bits (891), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 208/593 (35%), Positives = 319/593 (53%), Gaps = 41/593 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H+   L  SD+G  V + GWV  +R   G  F+ IRD+ GI Q V   +S      K   
Sbjct: 2   HNSKTLSKSDLGKTVTIQGWVQNIRKIKGKSFVIIRDYQGIFQAVVTQNSKVDRFTK--- 58

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E V+ + G++  R     N  I  G +E+    +E +S+A+++P  +  + E  E +R 
Sbjct: 59  -ESVVKVQGILTQRINP--NTKIHNGDLEILVDNLETISLADQIPFEISDQLEVSEDLRL 115

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           ++R+LDLRR  + +N+  R +I + +RC +   NFIE  TPIL+ S+PEGAR FLVP+R 
Sbjct: 116 QFRYLDLRRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEGARSFLVPTR- 174

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            +G F+ALPQ+PQ YKQLLM S F++YFQ A  FRDED R DR   EF QLD+E  F   
Sbjct: 175 QKGKFFALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDR-QFEFLQLDLEFGFATF 233

Query: 247 DDILNTMENVLRGVFEE-FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH----- 300
           + I   +E ++R ++ + F N   ++ +F ++ Y +AI+ YGTDKPDLR    +      
Sbjct: 234 EKISEEIEALIRDLWTKIFPN---LAIDFPKLTYFEAIKNYGTDKPDLRFETKLFDLDFL 290

Query: 301 NVTEHFVHSEFR--VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           N  +     + R     K+L   P Y ++    +           + E         + Y
Sbjct: 291 NDIDLLFQGKVRGLFLEKVLITKPEYRIFVEKIQQNNAKTLLYLHIFEGK-------ITY 343

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
             ++  E           K L     E   ++ +   G + F IA D  K  S A  A R
Sbjct: 344 FSFKTSE-----------KLLIKTKIENWILQNNYHTG-TLFLIAAD-YKIASQALGALR 390

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           N +A++  +IN + F+F WI+++P +E  +   K+  AH+PFT P    +     + L +
Sbjct: 391 NLVAKKYKLINEDQFKFTWIINWPLFEL-DINNKLTSAHHPFTAPTLESQQFLHKNPLKV 449

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NGFE+ SG IR H +E+  Q F+ +G+ ++ +  +FG L RAF  G+PPHG
Sbjct: 450 QAQAYDLVLNGFELGSGSIRIHNAELQKQVFTILGLDQDQIHTQFGALLRAFNYGVPPHG 509

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G A G+DR++M+L    ++R+V  FP++    DLL+ SP+ +    L E GL+
Sbjct: 510 GFAFGLDRLIMILRKTNSIRDVIAFPVNSKGLDLLLDSPTEIDQNLLAEFGLK 562


>gi|319777419|ref|YP_004137070.1| aspartyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318038494|gb|ADV34693.1| Aspartyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 569

 Score =  347 bits (890), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 212/598 (35%), Positives = 317/598 (53%), Gaps = 48/598 (8%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
            +L   D G  V L GWV   R  G + F+D+RD YGITQ V       F+   +V  E 
Sbjct: 9   NELSAKDKGKKVTLHGWVANKRRFGEMTFIDLRDRYGITQCV-------FKTDLNVTKES 61

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKY 128
            + + G V+ R  +  N N+ TG IE+   K  I S A EELP  +  + +  E  R KY
Sbjct: 62  SMEVIGKVVLRKQK--NPNLATGDIEVVVDKYTIFSEANEELPFAIRDDIDVKEETRMKY 119

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           RFLDLRR  + +NI+ + +I+ ++R  M   +FI+  TP+L  S+PEGARDFLVP+R N+
Sbjct: 120 RFLDLRRPVMQQNIITKDKIMFAVREFMHQNDFIDIETPMLAKSTPEGARDFLVPTR-NR 178

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             F+ALPQ+PQ +KQLLM SGF++Y+Q A CFRDED R DR P EF QLD+E SF+  +D
Sbjct: 179 DEFWALPQSPQLFKQLLMCSGFEKYYQFARCFRDEDSRKDRQP-EFTQLDIETSFLNVED 237

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
               +E + + +F+  S G  +   F R+ Y DA+R YGTDKPDLR    + ++ +  ++
Sbjct: 238 FQKYIEKLFKHIFK--SIGIKIKTPFPRVKYFDALRDYGTDKPDLRYDYKIVDINDFCLN 295

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++F +     S    +    I  K       F D + E A+      L Y  +   E+G 
Sbjct: 296 TDFNIIKYAPSKRMLFVDTLITKKD------FKD-LEEIAKKNKANILFYFVY---ENGE 345

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +          N V   A+ +  + ++ +  +FI           A+  +H +Q LG + 
Sbjct: 346 IVHTN----FANKVKDAALELVKNNKNKNGSYFIV----------ANTYDHASQALGAVR 391

Query: 429 CNCFE----------FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
               E            WI D+P +E++EE      AH+PFT     +E L   ++  ++
Sbjct: 392 VELNERFNYARKEWNLSWITDWPMFEYDEENNTWAAAHHPFTRFAHSLEELDKIEMKDVR 451

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NGFE+ SG  R    +   + F  +G+ ++  ++RF    +AF  G+PPH G
Sbjct: 452 ALSYDLVLNGFELGSGSARIFDKKTQKKMFDLIGMIEKEQQSRFDWFLKAFDYGIPPHCG 511

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           I  G+DR+ M++ G K +R+V  FP +    D+  G+P +V  +QL EL L I +  K
Sbjct: 512 IGLGLDRLTMIITGQKTIRDVIAFPKNAKNQDVFTGAPGSVDKKQLDELFLEIKKEDK 569


>gi|144227528|gb|AAZ44326.2| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 567

 Score =  346 bits (888), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 208/593 (35%), Positives = 319/593 (53%), Gaps = 41/593 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H+   L  SD+G  V + GWV  +R   G  F+ IRD+ GI Q V   +S      K   
Sbjct: 2   HNSKTLSKSDLGKTVTIQGWVQNIRKIKGKSFVIIRDYQGIFQAVVTQNSKVDRFTK--- 58

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E V+ + G++  R     N  I  G +E+    +E +S+A+++P  +  + E  E +R 
Sbjct: 59  -ESVVKVQGILTQRINP--NTKIHNGDLEILVDNLETISLADQIPFEISDQLEVSEDLRL 115

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           ++R+LDLRR  + +N+  R +I + +RC +   NFIE  TPIL+ S+PEGAR FLVP+R 
Sbjct: 116 QFRYLDLRRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEGARSFLVPTR- 174

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            +G F+ALPQ+PQ YKQLLM S F++YFQ A  FRDED R DR   EF QLD+E  F   
Sbjct: 175 QKGKFFALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDR-QFEFLQLDLEFGFPTF 233

Query: 247 DDILNTMENVLRGVFEE-FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH----- 300
           + I   +E ++R ++ + F N   ++ +F ++ Y +AI+ YGTDKPDLR    +      
Sbjct: 234 EKISEEIEALIRDLWTKIFPN---LAIDFPKLTYFEAIKNYGTDKPDLRFETKLFDLDFL 290

Query: 301 NVTEHFVHSEFR--VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           N  +     + R     K+L   P Y ++    +           + E         + Y
Sbjct: 291 NDIDLLFQGKVRGLFLEKVLITKPEYRIFVEKIQQNNAKTLLYLHIFEGK-------ITY 343

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
             ++  E           K L     E   ++ +   G + F IA D  K  S A  A R
Sbjct: 344 FSFKTSE-----------KLLIKTKIENWILQNNYHTG-TLFLIAAD-YKIASQALGALR 390

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           N +A++  +IN + F+F WI+++P +E  +   K+  AH+PFT P    +     + L +
Sbjct: 391 NLVAKKYKLINEDQFKFAWIINWPLFEL-DINNKLTSAHHPFTAPTLESQQFLHKNPLKV 449

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NGFE+ SG IR H +E+  Q F+ +G+ ++ +  +FG L RAF  G+PPHG
Sbjct: 450 QAQAYDLVLNGFELGSGSIRIHNAELQKQVFTILGLDQDQIHTQFGALLRAFNYGVPPHG 509

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G A G+DR++M+L    ++R+V  FP++    DLL+ SP+ +    L E GL+
Sbjct: 510 GFAFGLDRLIMILRKTNSIRDVIAFPVNSKGLDLLLDSPTEIDQNLLAEFGLK 562


>gi|39938614|ref|NP_950380.1| aspartyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|62287572|sp|Q6YR88|SYD_ONYPE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|39721723|dbj|BAD04213.1| aspartyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 586

 Score =  346 bits (888), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 212/607 (34%), Positives = 326/607 (53%), Gaps = 44/607 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M    +H    L ++  G  V L G++ R R  G  +F D+RD  GI Q++   ++  ++
Sbjct: 1   MKTKYSHYNNQLQLAHQGKTVFLKGFIFRKRNLGKTLFFDLRDVSGIVQLLVKENNPQYD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               ++ E V+ I G V+ R  +  N ++ TG IE+    IEILS A+ LPL VF  +E 
Sbjct: 61  KIALIKLETVVQIKGQVIERINK--NPDLPTGDIEILVSHIEILSEAQTLPLNVFQSQES 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLR   +   +++R  I  S+R  ++  +F+E  T IL+ S+PEGARD+
Sbjct: 119 LEETRLKYRYLDLRNPEVKHFLIQRHHITQSIRQTLLKNDFLELETLILSKSTPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+  G+FYALPQ+PQ +KQL M +GF+RYFQ+A CFRDED RSDR P EF Q+D+E
Sbjct: 179 LVPSRIYPGNFYALPQSPQLFKQLYMIAGFERYFQVARCFRDEDLRSDRQP-EFSQIDIE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ QD+I++  E ++  +F        +S  FLR+ Y  A   YG+DKPDLRNP+   
Sbjct: 238 TSFLNQDEIMSLTEEIIVDLFANIWK-KPLSQPFLRLTYQQAFELYGSDKPDLRNPL--- 293

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
                          KI      ++    P     GN + F  ++++ A    +    Y 
Sbjct: 294 ---------------KITDFTTFFDTTTCPQNMFSGNIKGF--KVSKTAVLTRRKLDEYQ 336

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD--MQDGDSCFFIAGDPLKFCSFAADAR 417
            +   +  N+     V K+  I+   +  ++ D  +++ + CF ++G            R
Sbjct: 337 LF-FSKHFNLKLFSFVKKNDKIIGGISQFIKDDSFLKNEEICFVVSGTKDIMHKALGIFR 395

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEE--------------KKIDFAHNPFTMPQ 463
             +A +L +++       WI+DFP +E  +E+               ++   H+PFT P 
Sbjct: 396 TKLALDLSLVDTTQEALLWIVDFPLFETTQEDLPQPDLTLENSNTSNRLYSLHHPFTAP- 454

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
             +  LK N   ++ A  YDLV NG+E+  G +R +  +     FS +G S+E V+ RFG
Sbjct: 455 CDIAILKSNPQKAL-AKTYDLVWNGYEVGGGSLRINNPQTQELIFSLLGFSQEEVQTRFG 513

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            L  A + G PPHGG+A G+DR+VML     N+++V  FP +Q+  DL++ +PS V  EQ
Sbjct: 514 FLVEALKYGTPPHGGLALGLDRLVMLFTKTNNIKDVIAFPKTQSAKDLMLEAPSAVDQEQ 573

Query: 584 LRELGLR 590
           L  L L+
Sbjct: 574 LNTLKLK 580


>gi|54020359|ref|YP_115651.1| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|53987532|gb|AAV27733.1| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 569

 Score =  345 bits (886), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 207/595 (34%), Positives = 320/595 (53%), Gaps = 41/595 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           + H+   L  SD+G  V + GWV  +R   G  F+ IRD+ GI Q V   +S      K 
Sbjct: 2   KMHNSKTLSKSDLGKTVTIQGWVQNIRKIKGKSFVIIRDYQGIFQAVVTQNSKVDRFTK- 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
              E V+ + G++  R     N  I  G +E+    +E +S+A+++P  +  + E  E +
Sbjct: 61  ---ESVVKVQGILTQRINP--NTKIHNGDLEILVDNLETISLADQIPFEISDQLEVSEDL 115

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR  + +N+  R +I + +RC +   NFIE  TPIL+ S+PEGAR FLVP+
Sbjct: 116 RLQFRYLDLRRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEGARSFLVPT 175

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R  +G F+ALPQ+PQ YKQLLM S F++YFQ A  FRDED R DR   EF QLD+E  F 
Sbjct: 176 R-QKGKFFALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDR-QFEFLQLDLEFGFA 233

Query: 245 EQDDILNTMENVLRGVFEE-FSNGNTVSNNFLRICYDDAIRRYGTDKPDLR------NPI 297
             + I   +E ++R ++ + F N   ++ +F ++ Y +AI+ YGTDKPDLR      +  
Sbjct: 234 TFEKISEEIEALIRDLWTKIFPN---LAIDFPKLTYFEAIKNYGTDKPDLRFETKLFDLD 290

Query: 298 IMHNVTEHFVHSEFRVF-SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
            ++N+   F      +F  K+L   P Y             R F +++      Q     
Sbjct: 291 FLNNIDLLFQGKVRGLFLEKVLITKPEY-------------RIFVEKI------QQNNAK 331

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
             ++  + E          ++ L I       +  +     + F IA D  K  S A  A
Sbjct: 332 TLLYLHIFEGKITYFSFKTSQKLLIKTKIENWILQNNYHTGTLFLIAAD-YKIASQALGA 390

Query: 417 -RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            RN +A++  +IN + F+F WI+++P +E  +   K+  AH+PFT P    +     + L
Sbjct: 391 LRNLVAKKYKLINGDQFKFAWIINWPLFEL-DINNKLTSAHHPFTAPTLESQQFLHKNPL 449

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            ++A  YDLV NGFE+ SG IR H  E+  Q F+ +G+ ++ +  +FG L RAF  G+PP
Sbjct: 450 KVQAQAYDLVLNGFELGSGSIRIHNVELQKQVFTILGLDQDQIHTQFGALLRAFNYGVPP 509

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           HGG A G+DR++M+L    ++R+V  FP++    DLL+ SP+ +    L E G +
Sbjct: 510 HGGFAFGLDRLIMILRKTNSIRDVIAFPVNSKGLDLLLDSPTEIDQNLLAEFGFK 564


>gi|59801827|ref|YP_208539.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|59718722|gb|AAW90127.1| putative aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 516

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 198/513 (38%), Positives = 305/513 (59%), Gaps = 17/513 (3%)

Query: 89  IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRI 148
           +I+G+IE+ A++IE+L+ A   P  +  E    E++R   R +DLRR  + +N+  R ++
Sbjct: 1   MISGKIEILAKEIEVLNAAATPPFQIDDEN-ISENVRLTNRVIDLRRPVMQRNLRLRYQV 59

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
              +R  + A+ FI+  TP+LT S+PEGARD+LVPSRV+ G F+ALPQ+PQ +KQLLM +
Sbjct: 60  ATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFALPQSPQLFKQLLMVA 119

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDRY+QI  CFRDED R+DR P EF Q+D+E SF+ +D+I++  E + + VF++  N +
Sbjct: 120 GFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSFLNEDEIMDITEGMAKQVFKDALNVD 178

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
               +F R+ Y +A+  YG+DKPD+R  +    +T+     EF+VF     +  G  V  
Sbjct: 179 L--GDFPRMPYSEAMFYYGSDKPDMRINLKFTELTDLMKTEEFKVFRGAADMKGGRVVAL 236

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG------MGPVAKHLNIV 382
               G   +R   D   ++    G  GLAYI  +++++GN++         P+ K L+  
Sbjct: 237 RVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KVNDAGNLSNGEDSGLQSPIVKFLSEN 294

Query: 383 NTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIIN---CNCFEFCWIM 438
             + I  R   Q+GD  FF A D  K  + A  A R  +  E G  N    + ++  W++
Sbjct: 295 ALKEIIERTAAQNGDIIFFGA-DKAKVVNEAVGALRIKVGLEHGKDNGYFTDEWKPLWVV 353

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           DFP +E++EE  +    H+PFT P+ G E L  +D  +  A  YD+V NG+EI  G IR 
Sbjct: 354 DFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRI 413

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
           H ++V  + F+ + IS E  + +FG L    + G PPHGG+A G+DR+V L+ GA+++R+
Sbjct: 414 HRADVQGKVFAALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRD 473

Query: 559 VSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           V  FP +Q    LL  +P++V  +QLREL LR+
Sbjct: 474 VIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRL 506


>gi|307128517|ref|YP_003880547.1| aspartyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306482979|gb|ADM89849.1| aspartyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 565

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 204/587 (34%), Positives = 331/587 (56%), Gaps = 28/587 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRT++CG L + DVG  V +SGW+ ++R  G IIF+D+RD YGITQ+         +   
Sbjct: 2   YRTNNCGVLRLKDVGKNVIMSGWIKKIRNLGSIIFIDLRDMYGITQLNLINYFNNKKKIN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++  E+V+ ++G V+ R ++  N    TG+IE+  +K++IL+ +   P  +    +  E 
Sbjct: 62  NLGREFVIKVEGKVIERLSK--NFKNPTGEIEILVKKLKILNNSLVPPFKIENNTDGNED 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR KYR+LD+RRD +  NI+ R +I   +R   + ENFIE  TPIL   + +GAR+F VP
Sbjct: 120 IRMKYRYLDIRRDIIKNNIILRNKIYIEIRNFFLKENFIEIETPILINPTTDGARNFYVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            R N G FY+L Q+PQ  KQLLM  G D+YFQI  CFRDED RSDR P EF Q+D EMSF
Sbjct: 180 YRKNPGFFYSLSQSPQLLKQLLMIGGIDKYFQIVKCFRDEDFRSDRQP-EFTQIDCEMSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+++DILN  E  +  + ++    N   N F  + Y++A+ +YG+DKPD+R  + +  + 
Sbjct: 239 VDENDILNIFEKFIHFLLKKIKGINL--NKFPILTYEEAMNKYGSDKPDIRFDMKLFELN 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     E+ +    L V   Y++               + +  + + + +  +   + + 
Sbjct: 297 DFSNQKEY-IMGISLPVCFNYKIIE-------------EILFFFKKKKIKQLIWIKYLKK 342

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           D+         +  ++N++   A R+  + + GD    + G+           R  +++ 
Sbjct: 343 DKFK-----SSIEININLIKNWAKRI--NSKCGDLLIILLGEKNIIVKNLGLFRIEMSKR 395

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQY 482
           L +I    F   WI +FP+++WN+E+   +  H+PFT P+   ++ LK N    IK+  Y
Sbjct: 396 LNLIKKKIFSPLWIRNFPYFKWNKEKSCYNSLHHPFTSPEIRDLKFLKENP-EKIKSKSY 454

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG EI  G IR + S++    F+++G SK+ +E  FG L ++F+ G PPHGGIA G
Sbjct: 455 DLVINGKEIGGGSIRINNSKIQKIIFNHLGFSKKKIEKEFGFLIKSFKYGAPPHGGIAFG 514

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           +DR++ +     N+R+   FP  Q+  DL++ SPS +  ++L++L +
Sbjct: 515 LDRLISVFAYKDNIRDFIAFPKGQDGKDLMIESPSKIEEKELKKLKI 561


>gi|312601217|gb|ADQ90472.1| Aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 567

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 208/593 (35%), Positives = 317/593 (53%), Gaps = 41/593 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H+   L  SD+G  V + GWV  +R   G  F+ IRD+ GI Q V   +S      K   
Sbjct: 2   HNSKTLSKSDLGKTVTIQGWVQNIRKIKGKSFVIIRDYQGIFQAVVTQNSKVDRFTK--- 58

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E V+ + G++  R     N  I  G +E+    +E +S+A+++P  +  + E  E +R 
Sbjct: 59  -ESVVKVQGILTQRINP--NTKIHNGDLEILVDNLETISLADQIPFEISDQLEVSEDLRL 115

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           ++R+LDLRR  + +N+  R +I + +RC +   NFIE  TPIL+ S+PEGAR FLVP+R 
Sbjct: 116 QFRYLDLRRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEGARSFLVPTR- 174

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            +G F+ALPQ+PQ YKQLLM S F++YFQ A  FRDED R DR   EF QLD+E  F   
Sbjct: 175 QKGKFFALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDR-QFEFLQLDLEFGFPTF 233

Query: 247 DDILNTMENVLRGVFEE-FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH----- 300
           + I   +E ++R ++ + F N   +  +F ++ Y +AI+ YGTDKPDLR    +      
Sbjct: 234 EKISEEIEALIRDLWTKIFPN---LVIDFPKLTYFEAIKNYGTDKPDLRFETKLFDLDFL 290

Query: 301 NVTEHFVHSEFR--VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           N  +     + R     K+L   P Y ++    +           + E         + Y
Sbjct: 291 NDIDLLFQGKVRGLFLEKVLITKPEYRIFVEKIQQNNAKTLLYLHIFEGK-------ITY 343

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-R 417
             ++  E           K L     E   ++ +   G + F IA D  K  S A  A R
Sbjct: 344 FSFKTSE-----------KLLIKTKIENWILQNNYHTG-TLFLIAAD-YKIASQALGALR 390

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           N +A++  +IN + F+F WI+++P +E  +   K+  AH+PFT P    +     + L +
Sbjct: 391 NLVAKKYKLINEDQFKFAWIINWPLFEL-DINNKLTSAHHPFTAPTLESQQFLHKNPLKV 449

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NGFE+ SG IR H  E+  Q F+ +G+ ++ +  +FG L RAF  G+PPHG
Sbjct: 450 QAQAYDLVLNGFELGSGSIRIHNVELQKQVFTILGLDQDQIHTQFGALLRAFNYGVPPHG 509

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G A G+DR++M+L    ++R+V  FP++    DLL+ SP+ +    L E GL+
Sbjct: 510 GFAFGLDRLIMILRKTNSIRDVIAFPVNSKGLDLLLDSPTEIDQNLLAEFGLK 562


>gi|72080582|ref|YP_287640.1| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 561

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 206/585 (35%), Positives = 316/585 (54%), Gaps = 41/585 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           SD+G  V + GWV  +R   G  F+ IRD+ GI Q V   +S      K    E V+ + 
Sbjct: 4   SDLGKTVTIQGWVQNIRKIKGKSFVIIRDYQGIFQAVVTQNSKVDRFTK----ESVVKVQ 59

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G++  R     N  I  G +E+    +E +S+A+++P  +  + E  E +R ++R+LDLR
Sbjct: 60  GILTQRINP--NTKIHNGDLEILVDNLETISLADQIPFEISDQLEVSEDLRLQFRYLDLR 117

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           R  + +N+  R +I + +RC +   NFIE  TPIL+ S+PEGAR FLVP+R  +G F+AL
Sbjct: 118 RQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEGARSFLVPTR-QKGKFFAL 176

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           PQ+PQ YKQLLM S F++YFQ A  FRDED R DR   EF QLD+E  F   + I   +E
Sbjct: 177 PQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDR-QFEFLQLDLEFGFATFEKISEEIE 235

Query: 255 NVLRGVFEE-FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH-----NVTEHFVH 308
            ++R ++ + F N   ++ +F ++ Y +AI+ YGTDKPDLR    +      N  +    
Sbjct: 236 ALIRDLWTKIFPN---LAIDFPKLTYFEAIKNYGTDKPDLRFETKLFDLDFLNDIDLLFQ 292

Query: 309 SEFR--VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366
            + R     K+L   P Y ++    +           + E         + Y  ++  E 
Sbjct: 293 GKVRGLFLEKVLITKPEYRIFVEKIQQNNAKTLLYLHIFEGK-------ITYFSFKTSE- 344

Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELG 425
                     K L     E   ++ +   G + F IA D  K  S A  A RN +A++  
Sbjct: 345 ----------KLLIKTKIENWILQNNYHTG-TLFLIAAD-YKIASQALGALRNLVAKKYK 392

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           +IN + F+F WI+++P +E  +   K+  AH+PFT P    +     + L ++A  YDLV
Sbjct: 393 LINEDQFKFTWIINWPLFEL-DINNKLTSAHHPFTAPTLESQQFLHKNPLKVQAQAYDLV 451

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
            NGFE+ SG IR H +E+  Q F+ +G+ ++ +  +FG L RAF  G+PPHGG A G+DR
Sbjct: 452 LNGFELGSGSIRIHNAELQKQVFTILGLDQDQIHTQFGALLRAFNYGVPPHGGFAFGLDR 511

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           ++M+L    ++R+V  FP++    DLL+ SP+ +    L E GL+
Sbjct: 512 LIMILRKTNSIRDVIAFPVNSKGLDLLLDSPTEIDQNLLAEFGLK 556


>gi|138896140|ref|YP_001126593.1| aspartyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|134267653|gb|ABO67848.1| Aspartyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 453

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 188/457 (41%), Positives = 273/457 (59%), Gaps = 11/457 (2%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           + + +  R ++  ++R  +  E F+E  TP+LT S+PEGARD+LVPSRV+ G FYALPQ+
Sbjct: 1   MFQTLELRHKVAKAVRNFLDGERFLEVETPMLTKSTPEGARDYLVPSRVHPGEFYALPQS 60

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           PQ +KQLLM  GF+RY+QI  CFRDED R+DR P EF Q+D+EMSFV+Q+DI++  E ++
Sbjct: 61  PQIFKQLLMVGGFERYYQITRCFRDEDLRADRQP-EFTQIDIEMSFVDQEDIIDLTERMM 119

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
             V +  + G  +   F RI YD+A+ RYG+DKPD+R  + + +V+E    S F+VF++ 
Sbjct: 120 AAVVKA-TKGIDIPRPFPRITYDEAMSRYGSDKPDVRFGLELVDVSEAVRGSAFQVFAR- 177

Query: 318 LSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPV 375
            +V  G +V AI  KG     +R   D + E+A   G  GLA   W   E G +   GP+
Sbjct: 178 -AVEQGGQVKAINVKGAASRYSRKDIDALAEFAGRYGAKGLA---WLKVEGGELK--GPI 231

Query: 376 AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435
           AK        A+R  L  +DGD   F+A +     +     R  + +ELG+I+     F 
Sbjct: 232 AKFFVDDEQTALRQLLAAEDGDLLLFVADEKAIVAAALGALRLKLGKELGLIDETKLAFL 291

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           W+ D+P  E++EEE +   AH+PFTMP      L   +  +++A  YDLV NG+E+  G 
Sbjct: 292 WVTDWPLLEYDEEEGRYYAAHHPFTMPVRDDIPLLETNPGAVRAQAYDLVLNGYELGGGS 351

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           +R    +V  + F  +G  +E    +FG L  AF+ G PPHGGIA G+DR+VMLL G  N
Sbjct: 352 LRIFERDVQEKMFRALGFDQEEARRQFGFLLEAFEYGTPPHGGIALGLDRLVMLLAGRTN 411

Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +R+   FP + +   LL  +P  VS +QL+EL L +V
Sbjct: 412 LRDTIAFPKTASASCLLTEAPGPVSEKQLKELHLAVV 448


>gi|71893591|ref|YP_279037.1| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 561

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 206/585 (35%), Positives = 316/585 (54%), Gaps = 41/585 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           SD+G  V + GWV  +R   G  F+ IRD+ GI Q V   +S      K    E V+ + 
Sbjct: 4   SDLGKTVTIQGWVQNIRKIKGKSFVIIRDYQGIFQAVVTQNSKVDRFTK----ESVVKVQ 59

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G++  R     N  I  G +E+    +E +S+A+++P  +  + E  E +R ++R+LDLR
Sbjct: 60  GILTQRINP--NTKIHNGDLEILVDNLETISLADQIPFEISDQLEVSEDLRLQFRYLDLR 117

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           R  + +N+  R +I + +RC +   NFIE  TPIL+ S+PEGAR FLVP+R  +G F+AL
Sbjct: 118 RQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEGARSFLVPTR-QKGKFFAL 176

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           PQ+PQ YKQLLM S F++YFQ A  FRDED R DR   EF QLD+E  F   + I   +E
Sbjct: 177 PQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDR-QFEFLQLDLEFGFPTFEKISEEIE 235

Query: 255 NVLRGVFEE-FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH-----NVTEHFVH 308
            ++R ++ + F N   ++ +F ++ Y +AI+ YGTDKPDLR    +      N  +    
Sbjct: 236 ALIRDLWTKIFPN---LAIDFPKLTYFEAIKNYGTDKPDLRFETKLFDLDFLNDIDLLFQ 292

Query: 309 SEFR--VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366
            + R     K+L   P Y ++    +           + E         + Y  ++  E 
Sbjct: 293 GKVRGLFLEKVLITKPEYRIFVEKIQQNNAKTLLYLHIFEGK-------ITYFSFKTSE- 344

Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELG 425
                     K L     E   ++ +   G + F IA D  K  S A  A RN +A++  
Sbjct: 345 ----------KLLIKTKIENWILQNNYHTG-TLFLIAAD-YKIASQALGALRNLVAKKYK 392

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           +IN + F+F WI+++P +E  +   K+  AH+PFT P    +     + L ++A  YDLV
Sbjct: 393 LINEDQFKFAWIINWPLFEL-DINNKLTSAHHPFTAPTLESQQFLHKNPLKVQAQAYDLV 451

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
            NGFE+ SG IR H +E+  Q F+ +G+ ++ +  +FG L RAF  G+PPHGG A G+DR
Sbjct: 452 LNGFELGSGSIRIHNAELQKQVFTILGLDQDQIHTQFGALLRAFNYGVPPHGGFAFGLDR 511

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           ++M+L    ++R+V  FP++    DLL+ SP+ +    L E GL+
Sbjct: 512 LIMILRKTNSIRDVIAFPVNSKGLDLLLDSPTEIDQNLLAEFGLK 556


>gi|47459109|ref|YP_015971.1| aspartyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|47458438|gb|AAT27760.1| aspartyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 567

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 208/593 (35%), Positives = 326/593 (54%), Gaps = 31/593 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           +T     + +  V   V + G+V ++R  G IIF+D+RD  GI Q+V    +  F     
Sbjct: 2   KTILNNTITIKHVDEKVTVYGFVEKIRKLGEIIFVDLRDESGILQIVFESSNIDF----- 56

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
              E +L I G+V  R  ++IN N+ TG+IE+     ++LS+AEELP  +    E  E +
Sbjct: 57  -TKESILEIIGIVSKR--KSINTNLQTGEIEIKVNSYKVLSLAEELPFEINSSNETNEEL 113

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYRFLDLR   L +NI  R ++  SMR  +   N+I   TP L   +PEGA+DF+VPS
Sbjct: 114 RLKYRFLDLRSKKLQENIRLRHKVTRSMRNFLDRNNYINIETPNLGRITPEGAKDFIVPS 173

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R  +G F++LPQ+PQ YKQLLMASGF++Y+QIA  FRDE  R DR   EF QLD+EM++ 
Sbjct: 174 R-KKGFFFSLPQSPQLYKQLLMASGFEKYYQIARAFRDEKSRKDR-QLEFTQLDIEMAYA 231

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++ +++ +EN+ + +F + +    +   F ++ YDDA+ +YG+DKPDLR    + + + 
Sbjct: 232 KEEIVIHLIENLFKEIFTDLNIDIKIP--FPKMNYDDALNQYGSDKPDLRYEYKLQDFSH 289

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                  +VF  + S+    ++  IP         F +   E A+     GL Y  +  +
Sbjct: 290 LIPKFNSKVFKNVKSL----KIIIIPYNITKKQFEFLE---EEAKQNHSKGLLYANFEKN 342

Query: 365 E--SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           +  SGN          L I+  E   ++ + ++  +   IA D L+  + A  +      
Sbjct: 343 KAISGNFFQF--FKSELEIIQGE---LKHNFKEKFAILAIADD-LEIVNQALGSVRVKLD 396

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL--LSIKAF 480
           E        F F W++++P YE+++E  K   AH+PFTMPQ  +E L   D   +  K+ 
Sbjct: 397 EFFDFEKKDFAFTWVINWPLYEFDKEVNKFQAAHHPFTMPQ--LEYLDNFDKKPMEAKSR 454

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR +  E+  + F  +G+S++ +E +F     AF+ G PPHGGIA
Sbjct: 455 AYDIVLNGYEVGGGSIRINDLEIQKRMFRTLGLSEKQIEEQFDFFLTAFKYGFPPHGGIA 514

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            GIDR++ +L  + ++R+V  FP +    D    +PS +  E L+E G+ I E
Sbjct: 515 LGIDRLLSILTNSTSIRDVIAFPKNSKGIDPFTKAPSKLENELLKEYGIIIKE 567


>gi|206896522|ref|YP_002247111.1| aspartyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206739139|gb|ACI18217.1| aspartyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 575

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 212/579 (36%), Positives = 309/579 (53%), Gaps = 23/579 (3%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSE 68
           GD+    + S V L GWV  VR  G ++F  I+D  GI Q   +  S    E+ K +  +
Sbjct: 7   GDVKNVKLDSVVELCGWVQYVRDFGKVVFFVIKDRTGIIQCYTSTQSEELLELVKKLSID 66

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V  R  + IN N+  G IE+  +  E+L+    LP  V GE    E  + KY
Sbjct: 67  DVVRVRGTVKRRPEDQINPNMENGDIEIEVEDFEVLNPCAPLPYDVNGEPS--EFTKLKY 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R++D+R   L  N+  R+ + + +R  +  + F E  TP LT  +P GAR+F+VP R   
Sbjct: 125 RYVDIRHGELLANLKTRSVVSSVIRNYLSRKGFWEIETPYLTKYTPGGARNFVVPVRQQP 184

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G FYAL ++PQ +KQ+LM SG DRYFQ A CFRDED R+DR P EF Q+D+E SFV ++D
Sbjct: 185 GYFYALAESPQIFKQMLMISGVDRYFQFARCFRDEDLRADRQP-EFTQVDIEASFVTEED 243

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I + +E +++ +F E   G  V   F R+ YD+A+  YG+DKPDLR  + + + T  F  
Sbjct: 244 IYDLVEGMMQELFREVL-GVQVETPFPRMTYDEAMSLYGSDKPDLRFQMTIDDYTNSFST 302

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           S+F  F  ++      E   +  KG   N+   DR       Q   G    F  + +S N
Sbjct: 303 SKFNAFRNVI------ERGGV-VKGLYWNKPL-DRSALKVLDQAASGSGNKFLFVSKSAN 354

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
               G +      V TE       ++DG +  F AGD      F  + R  + + LG+++
Sbjct: 355 ----GLLTNGPKSVLTEETW----LEDG-TYVFAAGDEWDVLPFLGELRLALGEYLGLLD 405

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            N ++F W+   P +E   E+  +  AH+PFTMP          D L ++A  YD+V NG
Sbjct: 406 DNEYKFVWVTSRPMFEI-AEDGSLQAAHHPFTMPDVTSIDEIRKDPLKVRARAYDIVLNG 464

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
            EI  G IR H +++    F  +G+S E +E RFG    A  CG PPHGGIA G DR+VM
Sbjct: 465 VEIGGGSIRIHKADLQRVVFEILGLSSEQIEERFGFFLDALSCGAPPHGGIALGFDRLVM 524

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           LL GA ++R+V  FP +++    L G+P+ +   Q +EL
Sbjct: 525 LLCGADSLRQVIAFPKTKSGTCPLTGAPARLFASQRQEL 563


>gi|307187769|gb|EFN72741.1| Aspartyl-tRNA synthetase, mitochondrial [Camponotus floridanus]
          Length = 649

 Score =  340 bits (871), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 234/606 (38%), Positives = 327/606 (53%), Gaps = 58/606 (9%)

Query: 1   MHRY--RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA- 57
           ++RY  RTH+CG+L + +VG  V+LSGW+   R      FL +RD YG TQ++   D   
Sbjct: 66  VNRYVLRTHTCGELTLQNVGEEVKLSGWMEFQRMGK---FLILRDSYGSTQLLIPEDRKD 122

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            FE  KS+  E VL I G V+SR     N  + TG IE+  + ++IL+VA    LPVF  
Sbjct: 123 LFETVKSLSYESVLSIVGKVISRPKNQQNKGMKTGDIEVYVESLKILNVASP-NLPVFI- 180

Query: 118 REY---PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASS 173
           REY    ES + KYR+L LR   L +N+  R+ +I  MR  +I E NF++  TP L  S+
Sbjct: 181 REYNKAKESQQMKYRYLSLRYPELQRNLRMRSSLITKMREFLIKECNFVDIETPTLFKST 240

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           P GA++F+VP+R   G+FY+L Q+PQQ+KQLLM  GFDRYFQ+A C+RDE  R DR P E
Sbjct: 241 PGGAQEFIVPTR-QPGNFYSLVQSPQQFKQLLMVGGFDRYFQVARCYRDESARHDRQP-E 298

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVF-EEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           F QLD+EMSFV++D I+N +E++L   + EE S    +   F  + Y DA+  YGTD+PD
Sbjct: 299 FTQLDIEMSFVDRDGIMNLIEHLLMYSWPEELS---PIKIPFKLMTYKDAMELYGTDQPD 355

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAK----GGGGNRAFCDRMNE 346
           LR P  + ++T H   S+  V  + + +N   +V+A+  P K           F    ++
Sbjct: 356 LRIPYRIQDLT-HI--SDLSVLKRTMKLNDQQKVYALTFPNKLKYLTNSVRNKFSKIRDD 412

Query: 347 WARSQG--QPGLAYIFWR--LDE--SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCF 400
           +  +    Q  +    WR  LDE  S NVA              E I     +Q+GD+  
Sbjct: 413 YFNTTKLIQLKIENNLWRAHLDELFSRNVA--------------EDILQYCQLQEGDAVL 458

Query: 401 FIAG---DPLKFCSFAADARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
              G   D LK          +I +E G  I  +  E  WI DFP + +   EK+++  H
Sbjct: 459 LAIGQQIDALKILGKLRVEFTNILEEKGEQIRSSEAEIVWITDFPLFTF---EKQLESTH 515

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +PFT P          D L ++   YDLV NG EIA G IR H + +  Q    + I   
Sbjct: 516 HPFTQPHSDDMEYFITDPLKVRGLHYDLVMNGSEIAGGSIRIHDANLQRQILKMLNID-- 573

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
             E+    +  A   G PPHGGIA G+DR+V LL  AK++R V  FP +    DL+ G+P
Sbjct: 574 --ESELSHMLEALMYGAPPHGGIAIGLDRLVCLLCNAKSIRNVIAFPKTIEGRDLMSGAP 631

Query: 577 STVSVE 582
            T+S E
Sbjct: 632 DTISAE 637


>gi|54290457|dbj|BAD61344.1| putative aspartyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 604

 Score =  340 bits (871), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 204/597 (34%), Positives = 301/597 (50%), Gaps = 92/597 (15%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R   CG+LG  D G  VRL GWV   R H G+ FL +RD                     
Sbjct: 88  RDALCGELGAGDAGRRVRLCGWVALHRAHAGLTFLTLRDR-------------------- 127

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFG----ERE 119
                                     +G ++++A  I +L SV   LP P+      + +
Sbjct: 128 --------------------------SGTVQVAADNIYVLNSVTRSLPFPITTADTVKEK 161

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           +PE IR ++R LDLRR  +  N+  R  ++  +R  +                  E   D
Sbjct: 162 FPEEIRLRFRVLDLRRPQMQSNLRLRHNVVKHIRRYL------------------EDRHD 203

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+ P     G FYALPQ+PQ +KQ+LM SGF++Y+QIA CFRDED R+DR P EF QLDM
Sbjct: 204 FVEP-----GMFYALPQSPQLFKQMLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQLDM 257

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E++F   +D+L   E ++R +F+E  +   + N F R+ Y +A+ RYGTD+PDLR    +
Sbjct: 258 EIAFTSMEDMLKLNEELMRHIFQEVGDIK-LPNPFPRLTYTEAMNRYGTDRPDLRFDWQL 316

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR------MNEWARSQGQ 353
            +V++ F+ S F++F+  L      +   +P    GG + F +       +   A   G 
Sbjct: 317 KDVSDAFLGSSFKIFADTLENGGVIKALCVP----GGAKEFSNTDLKKGTVYTEASKAGA 372

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GL   F ++ ++G + G+GP+   L     E +   LD + GD   F  G+        
Sbjct: 373 KGLP--FLKVMDNGELEGIGPLVASLKPEKKEQLLKHLDAKSGDLILFALGEQSAANRIL 430

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
              R  IA +L +I+ +     W+ DFP +EWN +E++ +  H+PFT P    E +  ND
Sbjct: 431 GRLRLFIAHKLEVIDTSAHSILWVTDFPMFEWNSDEQRYEALHHPFTAPNP--EDM--ND 486

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           L S +A  YD++ NG EI  G +R + S+V  + F  +GIS E  E +FG L   F  G 
Sbjct: 487 LPSARALAYDMIYNGVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDMGA 546

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           PPHGGIA G+DR+VMLL G  ++R+V  FP +      L  +PS V  +QL++LG R
Sbjct: 547 PPHGGIAYGLDRLVMLLAGENSIRDVIAFPKTTTAQCSLTKAPSPVDPQQLKDLGFR 603


>gi|328871079|gb|EGG19450.1| aspartyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 740

 Score =  339 bits (870), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 212/634 (33%), Positives = 327/634 (51%), Gaps = 54/634 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---- 59
           RTH CG+L + DVGS V L GWV  +R  G  +IF+ +RD +G TQ+  + +S       
Sbjct: 112 RTHDCGELRIKDVGSEVVLYGWVQSLRMIGDNLIFIVLRDGHGTTQLCISSESKQLSLKS 171

Query: 60  -----------EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
                      +I  ++  E V+ I G V++R     N  + TG IE+S  ++ +L+   
Sbjct: 172 TVLEVSLNEIKDIKTNISLESVVSIKGRVIARPQGMTNEKMSTGAIEVSVDELCLLNQCR 231

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
           +LP  +  +    E +R ++R++DLRR  +  NI  R+R+  + R  +  + F E  TP 
Sbjct: 232 DLPFTIEHDTGVTEEMRLRHRYVDLRRPDVQHNIRLRSRVAMAARDFLTRQKFTEVETPT 291

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L   +PEGAR++LVP+R+  G FY+LPQ+PQQYKQLLM  G DRYFQ+A C+RDED R+D
Sbjct: 292 LFRPTPEGAREYLVPTRM-AGQFYSLPQSPQQYKQLLMVGGMDRYFQLARCYRDEDLRAD 350

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           R P EF Q+DMEMSFV  D +   +E ++  ++ E   G T+   F  + Y DA+ R+G 
Sbjct: 351 RQP-EFTQIDMEMSFVNVDMVYRIIEGLIVSMWRE--AGYTIQAPFPFLSYKDALSRFGV 407

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG---------YEVWAIPAKGGGGNRA 339
           DKPD R  + M +++  F ++   +  KIL   P           +   +P         
Sbjct: 408 DKPDTRYGLEMRDLSSVFANTSIPLLKKILDATPPSTFEEAKSVIKCIKLPQVLNHFTSK 467

Query: 340 FCDR--MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN------IVNTEAIRVRL 391
             D+  ++    + G PGL  I  + D          ++KH++      I+N  A+  + 
Sbjct: 468 EIDQLVLDSKTFAPGSPGLIAIKCQSDREWKSM----LSKHMSSQEVDQIINRFAMEYKE 523

Query: 392 DMQDGDSCFFIAG-----DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFY--- 443
            +Q GD     AG     +P+   +    A     ++L  IN   F F W++DFP +   
Sbjct: 524 PVQAGDLILLSAGPRCIVEPVLGKTRILCANMMRDKKLLEINPRQFNFLWVVDFPLFTPA 583

Query: 444 EWNEEEKKIDFAHNPFTMPQGG-----MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           ++  E   +   H+PFT P            K +D   I+   YD+V NG E+  G IR 
Sbjct: 584 DYLNENSPLQATHHPFTAPHPDDIHHLANGTKPSDFSHIRGLHYDIVLNGVELGGGSIRI 643

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
           H S + L+    V   +  +  RF  L  A   G PPHGGIA G DR++ L++G+ ++R+
Sbjct: 644 HNSALQLKVLEGVLKLEPHLVQRFSHLLNALSLGCPPHGGIALGFDRLMALMVGSPSIRD 703

Query: 559 VSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           V  FP +    +L+  SPS V+  +L ELGL+++
Sbjct: 704 VIAFPKTSGGRELMTNSPSQVTSAELTELGLKLL 737


>gi|256752944|ref|ZP_05493773.1| aspartyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748177|gb|EEU61252.1| aspartyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 448

 Score =  339 bits (869), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 191/460 (41%), Positives = 273/460 (59%), Gaps = 20/460 (4%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           + KN++ R +I   +R  +    FIE  TP+L  S+PEGARD+LVPSR+  G FYALPQ+
Sbjct: 1   MQKNLMTRFKITKVVRDFLNKNGFIEIETPLLIKSTPEGARDYLVPSRIYPGKFYALPQS 60

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EMSFVE +D+L   E ++
Sbjct: 61  PQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEMSFVEVEDVLKINEKMI 119

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
             +F+E + G  V   F R+ Y +++ R+GTDKPDLR  + + ++++    SEF VF   
Sbjct: 120 AEIFKE-TLGIDVPIPFKRLSYQESMERFGTDKPDLRFGMELKDLSDIVAQSEFNVFKTA 178

Query: 318 LSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
           L  N    V  I  KG     R   D + E+A++ G  GL +I     E  +     P  
Sbjct: 179 LKNNGS--VRGINVKGAASMPRRQLDELVEFAKTYGAKGLLWIQVFEKEVKS-----PAT 231

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELG----IINCNC 431
           K L+    + I  RL+ + GD    +A  D + F + A     H+  ELG    +I+ N 
Sbjct: 232 KFLSEEEMKKILERLEAEAGDLLLIVADKDEIVFDTLA-----HLRLELGKRFNLIDENK 286

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
           +EF WI+DFP  E++E EK+    H+PFT P+     L   + L ++A  YD+V NG EI
Sbjct: 287 YEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEPLKVRAKAYDIVLNGTEI 346

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G IR H +E+  + F  +G S+E    RFG L  AF+ G PPHGGIA G+DR+ M++ 
Sbjct: 347 GGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFKYGAPPHGGIAYGLDRLAMIIT 406

Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+  +R+V  FP +QN   L+  +PS VS EQL+EL +++
Sbjct: 407 GSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 446


>gi|217032014|ref|ZP_03437515.1| hypothetical protein HPB128_187g41 [Helicobacter pylori B128]
 gi|216946324|gb|EEC24930.1| hypothetical protein HPB128_187g41 [Helicobacter pylori B128]
          Length = 492

 Score =  338 bits (868), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 186/506 (36%), Positives = 288/506 (56%), Gaps = 17/506 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ + G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI-GNKSVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+    G+ +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQAIFKAI--GHDISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            F  S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFRDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL--Q 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G     GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 356 IKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  + E     AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFE--KTENGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAF 508
           D+V NG E+  G IR H  E+  ++ 
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMTKKSL 492


>gi|281210595|gb|EFA84761.1| aspartyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 707

 Score =  337 bits (864), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 208/630 (33%), Positives = 330/630 (52%), Gaps = 48/630 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV------------ 50
           + RTH+CG+L  +DVG  V L+GWV  +R  G  IF+ IRD +G TQ+            
Sbjct: 87  KTRTHTCGELSKNDVGKTVILNGWVSSLRKLGEFIFIVIRDGHGTTQIYCPLENKSLQLC 146

Query: 51  --VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
             V N D    +  KS+R E V+ + G+V  R  +  N  + TG IE+   ++ +L+   
Sbjct: 147 SEVPNVDFNSVDHLKSLRLESVVRVVGVVRERPPKMANPAMSTGDIEVDVSQLVLLNQCR 206

Query: 109 ELPLPVFGERE-YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
           +LP  +  + E   E +R K+R++DLRR ++  NI  R+++  + R  +  + F+E  TP
Sbjct: 207 DLPFTIEHDAERVTEEVRLKHRYVDLRRPSVQSNIRLRSKVSMAARHYLTGQQFVEVETP 266

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            L   +PEGAR++LVP+R ++G FY+LPQ+PQQYKQLLM  G DRYFQ+A C+RDED R+
Sbjct: 267 TLFRPTPEGAREYLVPTR-HKGQFYSLPQSPQQYKQLLMVGGLDRYFQLARCYRDEDLRA 325

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
           DR P EF Q+DME+SFV+   + N +E ++  +++E   G  +   F    Y   + RYG
Sbjct: 326 DRQP-EFTQIDMELSFVDCKQVYNIIEGLIVAMWKE--AGYDIKTPFPHYTYRQVLDRYG 382

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG---------YEVWAIPAKGGGGNR 338
            DKPD R  + ++++T  F  ++  +F K+L   P           +   +P      + 
Sbjct: 383 IDKPDTRYGLELNDITNIFSDTKVEIFRKLLDQPPSSSFTEAEHIIKCIKLPKVQPTMSS 442

Query: 339 AFCDRMNEWARS--QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
              D +   +++     PGL  I       G+      + K L+ V  + +  RL +++G
Sbjct: 443 KDIDTILNESKTLIPNSPGLVSI-----RVGSKEWKSMIMKSLSQVEKDKLSERLALEEG 497

Query: 397 DSCFFIAGDPLKFCSFAADAR---NHIAQELGIINCNC--FEFCWIMDFPFY---EWNEE 448
           D     AG      S     R    ++ +E G++  N   F F W+ DFP +   ++  +
Sbjct: 498 DVVLVAAGPRFIVESLLGKVRIFSANLMKERGLLELNPKQFNFLWVDDFPLFTPADYLSD 557

Query: 449 EKKIDFAHNPFTMPQGG-----MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
              +   H+PFT P        +   K +D   I+   YD+V NG E+  G IR H  E 
Sbjct: 558 ASPLQSTHHPFTAPHPDDMLALLNGEKPSDFEHIRGLHYDIVLNGVELGGGSIRIHNQET 617

Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            L+    V   +  +  RF  L  A   G PPHGGIA G DR++ L++G+ ++R+V  FP
Sbjct: 618 QLRVLERVLKLEPHMVQRFNHLLTALSMGCPPHGGIALGFDRLMSLMVGSPSIRDVIAFP 677

Query: 564 MSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            +    +L+  SP++V+ ++L EL L+ +E
Sbjct: 678 KTSGGRELMTNSPASVTTQELIELNLKQIE 707


>gi|27904787|ref|NP_777913.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29427402|sp|P59422|SYD_BUCBP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|27904185|gb|AAO27018.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 576

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 204/583 (34%), Positives = 319/583 (54%), Gaps = 19/583 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT+ CG L VS VG  ++L GWV++ R    I+F+DIRD  GI QV+ +  S   F+ A 
Sbjct: 2   RTNFCGTLNVSHVGKTIKLCGWVNKFRNLKEILFIDIRDQTGIIQVLFSKKSELLFKKAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V  R  +  N  + TG+IE+ A +++I + ++  PLP+  +    E 
Sbjct: 62  DLRNEFCIQVLGIVQERITKNKNYTMSTGEIEIFALELKIFNKSQ--PLPIDLKSCNIEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLR   + +NI+ R  I   +R  M    F++  TPILT S+PEGARD++VP
Sbjct: 120 TRLKFRYLDLRHPNMIRNIIIRNDITIIIRNFMKKNKFLDIETPILTKSTPEGARDYIVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++  +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED RSDR P EF Q+D+E+SF
Sbjct: 180 SRIHKNKYYALPQSPQLFKQLLMISGIDRYYQIAKCFRDEDLRSDRQP-EFTQIDIEVSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   +E ++  V+ +  N +     F ++ + DAI+ YGTDKPDLRNPI + +VT
Sbjct: 239 LNAKKVRKIIERMITSVWNKIINVHL--KKFQKLSFYDAIKMYGTDKPDLRNPIQLIDVT 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIP---AKGGGGNRAFCDRMNEWARSQGQPGLAYI- 359
            + +H +  + +  L      +   I     +G   N  + +  +   +   +  L  + 
Sbjct: 297 -NIIHVKNNINAITLPNKKTQQNIVIAMCIPRGMSLNINYINSYHHLVQKYTKNKLFNVE 355

Query: 360 ---FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
                 + E    +     +  L    T  +  +   + GD  F+++             
Sbjct: 356 VLNHCPIKEQKKTSFHKKPSSDL----TFQLISKTSAKHGDMIFYLSEKSPLVYEIMGKL 411

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  + ++L +I+ N ++  WI +FP ++ NE  + I   H+PFT P+         +   
Sbjct: 412 RIELGKDLNLIDYNSWKPLWITNFPLFKKNELNQYIS-THHPFTAPKYMKIDTSITNYEE 470

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I A  YDLV NG+EI SG +R H  E+    F+ +GI+  + +N F     A + G PPH
Sbjct: 471 IVADSYDLVINGYEIGSGSVRIHDLELQKTVFNILGINTVLQKNNFNFFLNALKYGTPPH 530

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
            GIA G+DRI MLL  + N+R+V  FP +     L  G+PS +
Sbjct: 531 AGIALGLDRITMLLTNSHNLRDVIAFPKTTTGSCLTTGAPSKI 573


>gi|217033562|ref|ZP_03438991.1| hypothetical protein HP9810_905g81 [Helicobacter pylori 98-10]
 gi|216944087|gb|EEC23518.1| hypothetical protein HP9810_905g81 [Helicobacter pylori 98-10]
          Length = 462

 Score =  332 bits (852), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 182/472 (38%), Positives = 273/472 (57%), Gaps = 16/472 (3%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+L
Sbjct: 3   EDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYL 62

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 63  VPSRVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEM 121

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF  ++D++  +E++L+ +F+    G+ +S  F R+ Y +A+  YG+DKPDLR  + +  
Sbjct: 122 SFCSENDVMGVVEDLLQEIFKAI--GHHISKPFKRMPYKEAMENYGSDKPDLRFELPLIE 179

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYI 359
           V E F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+
Sbjct: 180 VGECFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYL 239

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++ E G     GP+ K L+    + I  +   + GD  FF AGD      +    R  
Sbjct: 240 --QIKEDGI---KGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLK 294

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ L +I+ +   F W+++FP +E  + E      H+PFTMP+             I+A
Sbjct: 295 VAETLDLIDKDALNFLWVVNFPMFE--KTENGYHAVHHPFTMPKNIECEDI----EEIEA 348

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG 
Sbjct: 349 HAYDVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGF 408

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+
Sbjct: 409 AIGFDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRL 460


>gi|293363460|ref|ZP_06610217.1| aspartate--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552980|gb|EFF41733.1| aspartate--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 566

 Score =  332 bits (852), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 210/590 (35%), Positives = 314/590 (53%), Gaps = 33/590 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           +T +   L  SD+G  V L G+V   R  G + F+D+RD YGITQ+V       F+   +
Sbjct: 3   KTINNNQLRASDIGKKVTLYGFVANKRKFGELSFIDLRDRYGITQLV-------FKENTT 55

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
              E VL + G V  R  E  N  + TGQIE+  +  ++LS+A +LP  V  + E  E  
Sbjct: 56  FSRESVLEVTGTVALRKEE--NKLLETGQIEILVESYKVLSLANDLPFVVRDDVEVKEEN 113

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR  + KN++ + ++ +++R  M   +F+E  TPIL   +PEGARDFLVP+
Sbjct: 114 RLQYRYLDLRRPIMQKNLILKNKVFHAIREFMQENDFLEMETPILAKGTPEGARDFLVPT 173

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R N+G F+ALPQ+PQ +KQLLM SG +RY+Q A CFRDED R DR   EF QLD+E S++
Sbjct: 174 R-NEGKFFALPQSPQLFKQLLMVSGLERYYQFAKCFRDEDSRKDR-QLEFIQLDIETSYL 231

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             ++    +E + + V  +   G  +   F R+ Y D IR YGTDKPDLR  + + ++ E
Sbjct: 232 SVENFQAYIEKLFKYVMHKI--GIEIKIPFQRLKYFDCIRDYGTDKPDLRFDLKIQDINE 289

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
               ++F +  K  S      +  I  K    N      ++E A+      L Y  + ++
Sbjct: 290 FCNSTDFNII-KNASSKRMLIIEQIIEKKTFKN------ISEIAKKNKVNALFY--FAIE 340

Query: 365 ESGNVAGMGPVAKHLNIVNT--EAIRVRLDMQD-GDSCFFIAGDPLKFCSFAADARNHIA 421
            S  +        H N  +   E + + +  Q+  +   FIA D  +  S A  A     
Sbjct: 341 NSKVI--------HSNFASKVQEEVDILIKKQNIVNGTVFIAADKYESASQALGALRVEL 392

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             L     + + F WI D+P +E+ EEE +   AH+PFT     +E +K  D   I A  
Sbjct: 393 NNLFNYARDEYNFSWITDWPMFEFVEEENRWQAAHHPFTQFDNDLEEVKTMDKEKIMAKS 452

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NGFE+ SG  R +        F  +G+ K+  E +FG   RAF+ G+PPH GI  
Sbjct: 453 YDLVFNGFELGSGSARIYNPVEQELMFDMIGLDKKQQEEKFGWFLRAFKYGVPPHCGIGL 512

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++M+L   K +R+V  FP +    D++  +P+ +    L E+ + I
Sbjct: 513 GMDRLIMILANQKTIRDVIPFPKNSKGQDVMTDAPNNIEQNSLDEVFITI 562


>gi|153823939|ref|ZP_01976606.1| aspartyl-tRNA synthetase [Vibrio cholerae B33]
 gi|126518543|gb|EAZ75766.1| aspartyl-tRNA synthetase [Vibrio cholerae B33]
          Length = 482

 Score =  331 bits (848), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 198/490 (40%), Positives = 287/490 (58%), Gaps = 13/490 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVDL--GDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VFS   + +P   V A+   GG    R   D    +    G  GLA++   
Sbjct: 297 DLLKDVDFKVFSGPAN-DPKGRVAALCIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIA 421
              +G      PVAK L     +AI  R   Q GD   F   D  K  + A  A R    
Sbjct: 356 DLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILF-GADSAKVVAEALGALRLKAG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAF 480
           +ELGI N + +   W++DFP +E +++E  +   H+PFT P     E LK N   ++ + 
Sbjct: 415 KELGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEAL-SN 472

Query: 481 QYDLVCNGFE 490
            YD+V NG+E
Sbjct: 473 AYDMVLNGYE 482


>gi|323165010|gb|EFZ50800.1| aspartyl-tRNA synthetase [Shigella sonnei 53G]
          Length = 504

 Score =  330 bits (847), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 191/507 (37%), Positives = 283/507 (55%), Gaps = 8/507 (1%)

Query: 89  IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRI 148
           + TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR  + + +  R +I
Sbjct: 1   MATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKI 58

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM S
Sbjct: 59  TSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMS 118

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R ++ E    +
Sbjct: 119 GFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVD 177

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
               +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + +P   V A
Sbjct: 178 L--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-DPKGRVAA 234

Query: 329 IPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI 387
           +   GG    R   D    + +  G  GLAYI       G      PVAK LN    EAI
Sbjct: 235 LRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAI 294

Query: 388 RVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNE 447
             R   QDGD  FF A +           R  + ++LG+ + + +   W++DFP +E ++
Sbjct: 295 LDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFE-DD 353

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
            E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H  ++    
Sbjct: 354 GEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTV 413

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +  
Sbjct: 414 FGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTA 473

Query: 568 FCDLLMGSPSTVSVEQLRELGLRIVEN 594
              L+  +PS  +   L EL +++V+ 
Sbjct: 474 AACLMTEAPSFANPTVLAELSIQVVKK 500


>gi|323972626|gb|EGB67829.1| aspartyl-tRNA synthetase [Escherichia coli TA007]
          Length = 504

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 190/507 (37%), Positives = 282/507 (55%), Gaps = 8/507 (1%)

Query: 89  IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRI 148
           + TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR  + + +  R +I
Sbjct: 1   MATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKI 58

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM S
Sbjct: 59  TSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMS 118

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R ++ E    +
Sbjct: 119 GFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVD 177

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
               +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + +P   V A
Sbjct: 178 L--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-DPKGRVAA 234

Query: 329 IPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI 387
           +   GG    R   D    + +  G  GLAYI       G      PVAK LN    E I
Sbjct: 235 LRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEDI 294

Query: 388 RVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNE 447
             R   QDGD  FF A +           R  + ++LG+ + + +   W++DFP +E ++
Sbjct: 295 LDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFE-DD 353

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
            E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H  ++    
Sbjct: 354 GEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTV 413

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +  
Sbjct: 414 FGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTA 473

Query: 568 FCDLLMGSPSTVSVEQLRELGLRIVEN 594
              L+  +PS  +   L EL +++V+ 
Sbjct: 474 AACLMTEAPSFANPTALAELSIQVVKK 500


>gi|47094595|ref|ZP_00232243.1| aspartyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|47017030|gb|EAL07915.1| aspartyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
          Length = 467

 Score =  328 bits (841), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 187/473 (39%), Positives = 268/473 (56%), Gaps = 11/473 (2%)

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LVP
Sbjct: 1   MRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVP 60

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E SF
Sbjct: 61  SRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETSF 119

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    E++L  V +E  N  T+   F R+ Y +A+ R+G+DKPD+R  + + NV+
Sbjct: 120 LTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQNVS 178

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361
           +     +F+VF    ++  G EV AI AK      +R   D +  +  + G  GLA   W
Sbjct: 179 DVVKDVDFKVFQS--AIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLA---W 233

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E+G + G  P+AK         ++  L  +DGD   F A       +     RN + 
Sbjct: 234 LKVEAGELKG--PIAKFFPEEKATELKASLQAEDGDLLLFAADKADIVAASLGALRNKLG 291

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A  
Sbjct: 292 KELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAEA 351

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA 
Sbjct: 352 YDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIAL 411

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+ 
Sbjct: 412 GLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKK 464


>gi|332758054|gb|EGJ88380.1| aspartyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332766842|gb|EGJ97043.1| aspartyl-tRNA synthetase [Shigella flexneri 2930-71]
          Length = 504

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 190/507 (37%), Positives = 282/507 (55%), Gaps = 8/507 (1%)

Query: 89  IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRI 148
           + TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR  + + +  R +I
Sbjct: 1   MATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKI 58

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM S
Sbjct: 59  TSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMS 118

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R ++ E    +
Sbjct: 119 GFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVD 177

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
               +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + +P   V A
Sbjct: 178 L--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-DPKGRVAA 234

Query: 329 IPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI 387
           +   GG    R   D    + +  G  GLAYI       G      PVAK LN    EAI
Sbjct: 235 LRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAI 294

Query: 388 RVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNE 447
             R   QDGD  FF A +              + ++LG+ + + +   W++DFP +E ++
Sbjct: 295 LDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGKDLGLTDESKWAPLWVIDFPMFE-DD 353

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
            E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H  ++    
Sbjct: 354 GEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTV 413

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +  
Sbjct: 414 FGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTA 473

Query: 568 FCDLLMGSPSTVSVEQLRELGLRIVEN 594
              L+  +PS  +   L EL +++V+ 
Sbjct: 474 AACLMTEAPSFANPTALAELSIQVVKK 500


>gi|295698521|ref|YP_003603176.1| aspartyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157053|gb|ADD79498.1| aspartyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 571

 Score =  327 bits (837), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 204/585 (34%), Positives = 318/585 (54%), Gaps = 26/585 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG++    +G+ V +SGW+H +R    + FLDIRD  GI Q V +     + F  +
Sbjct: 3   RTHYCGEVNFFHIGTRVIISGWIHSIRRLKNLTFLDIRDRTGIIQAVCSKKLFPSIFLQS 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +  E+ + I G V  +  + I+ +++   IE+    I IL+ ++ LP+ + G +   E
Sbjct: 63  LKLNQEFCIRISGKVREKRKK-ISESVLQKNIEVLVHSINILNNSKNLPIDIIGRKISSE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++ KYR+L LR   ++K +V R+ I + +   M    F+   TP L+  +  GA+DFLV
Sbjct: 122 EMQLKYRYLYLRNPDMNKTLVIRSEITHFIHQFMHKNKFVNIETPYLSNPTDGGAKDFLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR     +YAL Q+PQ +KQ+LM SGFDRY+QIA CFRDED RS+R P EF QLDMEMS
Sbjct: 182 PSRTKHNHYYALAQSPQMFKQILMISGFDRYYQIAKCFRDEDSRSNRQP-EFTQLDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV    I   +E  +R ++++    + + N F  I ++DAI++YGTDKPDLRNP+ + ++
Sbjct: 241 FVNSKKIKKIIERFIRKLWKKILKYD-LPNCFPTITFEDAIQKYGTDKPDLRNPLELVDI 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI--- 359
           T  ++ S F    +  S      +  I        +   D  +   +   Q  L +    
Sbjct: 300 T--YLTSSFDKPKRKFSNEDSCILIHI-------KQVLKDIKSIQLKKYQQLSLKFKIKN 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTE---AIRVRLDMQDGDS-CFFIAGDPLKFCSFAAD 415
           F  L+ S +      V K+L     E   +IR    +++GD  C  I   PL    F   
Sbjct: 351 FLILEFSSDFLNQT-VKKNLLGFPVELFYSIRSNFQIKEGDVICVGIGKKPL-LNQFMGH 408

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDL 474
            R+ +A+EL I   N ++  W++DFP ++  E++  +   H+ FT P+   +  L  N +
Sbjct: 409 LRSKLAKELDISEKNVWKPIWVIDFPMFK-EEKDGCLKPVHHVFTSPKLCDISKLYSNPI 467

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            ++    YD+V NG E+ SG +R +  E+  + F  + I++E  +NRFG    A Q G+P
Sbjct: 468 RTVSD-SYDMVINGQELGSGSVRIYKKEIQEKIFQILKINEEDQKNRFGFFLEAMQYGVP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
           PH G A G+DRIVML+L  KN++ V  FP + +   L+  SPS +
Sbjct: 527 PHAGFAFGLDRIVMLMLNQKNIKNVIAFPKTTSASCLMTNSPSKI 571


>gi|284931196|gb|ADC31134.1| Aspartyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 582

 Score =  323 bits (829), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 201/579 (34%), Positives = 309/579 (53%), Gaps = 29/579 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + GWV  VR  G   F+++ D   + QV    +    + A   R + V     L + +
Sbjct: 26  VEIVGWVKNVRKLGNFNFIEVADKSALIQVFDQKN----QYANLSREDLVFIKGKLQLKK 81

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
            A   N N+  G  EL   ++ ++S ++  P  +    +  E +R KYR+LDLRR  L K
Sbjct: 82  VA---NPNLELGDRELLINQLTLISKSKTPPFLIEDNTDALEEVRLKYRYLDLRRPVLQK 138

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           N+  R+     +R  + ++ FIE  TPIL+ ++PEGARD++VPSR+    FYALPQ+ Q 
Sbjct: 139 NMKLRSDFFLIVRNFLTSQGFIEIETPILSKTTPEGARDYVVPSRLGPNMFYALPQSAQI 198

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           YKQLLM SGF+RYFQI+ CFRDED R DR P E  Q+DME+SF+ ++     +E +   +
Sbjct: 199 YKQLLMISGFERYFQISRCFRDEDLRKDRQP-EHVQIDMEVSFMSKEQFFKLVEAMFIHI 257

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
           F+   N   +  NF+R+ YD+A+ R+GTDKPDLR    + +V+  FV  EF VF +    
Sbjct: 258 FDRLMNV-KIEPNFMRMSYDEAMNRFGTDKPDLRFGCELVDVSAVFVDHEFSVFKQFALK 316

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE--SGNVAGM--GPVA 376
           N    + AI       +      M ++A+     GL++  +  ++   G++         
Sbjct: 317 N---RLKAIVLDEILISYKEHKVMEKYAKDNYAKGLSWFSYDQNQIIDGSIKRFISSDDL 373

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFC 435
           K+L ++N +            + FF+  D L   + +  A R  + +   + N + ++F 
Sbjct: 374 KNLGLLNKKG-----------TIFFVGDDDLNVINKSLGAVRIQLNELYQLANEDEYKFL 422

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           WI+D+P YEW+++      AHN FT P+    S    D  + KA  YDLV NGFE+ SG 
Sbjct: 423 WIVDWPLYEWDDKTNSYQSAHNLFTAPEAKYLSTFNEDKANAKAASYDLVLNGFELGSGA 482

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           IR     +     S++G+S+  + ++FG L  A+Q G P H GI  G DR++M+L  +K+
Sbjct: 483 IRITDPSLQKAVMSSLGLSEAEMNDKFGFLLDAYQYGAPQHCGIGLGSDRLLMILTKSKS 542

Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQ-LRELGLRIVE 593
           +R+V  FP +    DL+  SPS    +Q L EL L I E
Sbjct: 543 IRDVIAFPKNNQGFDLMNNSPSEAINQQFLDELYLAIKE 581


>gi|218512638|ref|ZP_03509478.1| aspartyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 239

 Score =  323 bits (829), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 147/235 (62%), Positives = 186/235 (79%), Gaps = 1/235 (0%)

Query: 337 NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
           +RAFCDRMN WA+SQ QPGL YIFWR  E   + G GP+AK++    T+AIR +L + DG
Sbjct: 6   SRAFCDRMNAWAQSQCQPGLGYIFWR-KEGEKLEGAGPLAKNIGEERTDAIRTQLGLGDG 64

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+CFF+AG+P KF  FA +AR    +EL +++ + FE CWI+DFPF+EW+EEEKK+DFAH
Sbjct: 65  DACFFVAGEPEKFYKFAGEARTKAGEELNLVDRDRFELCWIVDFPFFEWSEEEKKVDFAH 124

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           NPF+MPQGG+++L+  D L+IKAFQYD VCNGFEIASG IRN   E M+ AF  +G+S++
Sbjct: 125 NPFSMPQGGLDALQNQDPLTIKAFQYDAVCNGFEIASGSIRNQSPETMVAAFEKIGLSQQ 184

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            VE+RFGGLYRAFQ G PPHGG A GIDRI+MLL+GAKN+RE+SLFPM+Q   DL
Sbjct: 185 DVEDRFGGLYRAFQYGAPPHGGAAFGIDRIIMLLVGAKNLREISLFPMNQQAQDL 239


>gi|31544389|ref|NP_852967.1| aspartyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|31541233|gb|AAP56535.1| Aspartyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930432|gb|ADC30371.1| Aspartyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 582

 Score =  323 bits (828), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 200/579 (34%), Positives = 309/579 (53%), Gaps = 29/579 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + GWV  VR  G   F+++ D   + QV    +    + A   R + V     L + +
Sbjct: 26  VEIVGWVKNVRKLGNFNFIEVADKSALIQVFDQKN----QYANLSREDLVFIKGKLQLKK 81

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
            A   N N+  G  EL   ++ ++S ++  P  +    +  E +R KYR+LDLRR  L K
Sbjct: 82  VA---NPNLELGDRELLIDQLTLISKSKTPPFLIEDNTDALEEVRLKYRYLDLRRPVLQK 138

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           N+  R+     +R  + ++ FIE  TPIL+ ++PEGARD++VPSR+    FYALPQ+ Q 
Sbjct: 139 NMKLRSDFFLIVRNFLTSQGFIEIETPILSKTTPEGARDYVVPSRLGPNMFYALPQSAQI 198

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           YKQLLM SGF+RYFQI+ CFRDED R DR P E  Q+DME+SF+ ++     +E +   +
Sbjct: 199 YKQLLMISGFERYFQISRCFRDEDLRKDRQP-EHVQIDMEVSFMSKEQFFKLVEAMFIHI 257

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
           F+   N   +  NF+R+ YD+A+ R+GTDKPDLR    + +V   FV  EF VF +    
Sbjct: 258 FDRLMNV-KIEPNFMRMSYDEAMNRFGTDKPDLRFGCELVDVGAAFVDHEFSVFKQFALK 316

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE--SGNVAGM--GPVA 376
           N    + AI       +      + ++A+     GL++  +  ++   G++         
Sbjct: 317 N---RLKAIVLDEILISYKEHKVLEKYAKDNYAKGLSWFSYDQNQIIDGSIKRFISSDDL 373

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFC 435
           K+L ++N +            + FF+  D L   + +  A R+ + +   + N + ++F 
Sbjct: 374 KNLGLLNKKG-----------TIFFVGDDDLNVINKSLGAVRSQLNELYQLANEDEYKFL 422

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           WI+D+P YEW+++      AHN FT P+    S    D  + KA  YDLV NGFE+ SG 
Sbjct: 423 WIVDWPLYEWDDKTNSYQSAHNLFTAPEAKYLSTFNEDKANAKAASYDLVLNGFELGSGA 482

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           IR     +     S++G+S+  + ++FG L  A+Q G P H GI  G DR++M+L  +K+
Sbjct: 483 IRITDPSLQKAVMSSLGLSEAEMNDKFGFLLDAYQYGAPQHCGIGLGSDRLLMILTKSKS 542

Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQ-LRELGLRIVE 593
           +R+V  FP +    DL+  SPS    +Q L EL L I E
Sbjct: 543 IRDVIAFPKNNQGFDLMNNSPSEAINQQFLDELYLAIKE 581


>gi|258546257|ref|ZP_05706491.1| aspartate--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258518523|gb|EEV87382.1| aspartate--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 439

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 180/441 (40%), Positives = 270/441 (61%), Gaps = 22/441 (4%)

Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           ++  TP+LT ++PEGARD+LVPSR + G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFR
Sbjct: 1   MDIETPMLTKATPEGARDYLVPSRTHPGKFFALPQSPQLFKQMLMMSGFDRYYQIVRCFR 60

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
           DED R+DR P EF QLD+E SF+E++DIL  ME ++RG+F+E   G  ++N F R+ Y +
Sbjct: 61  DEDLRADRQP-EFTQLDIETSFLEEEDILQIMEPMIRGIFKEHL-GVELANPFPRMTYRE 118

Query: 282 AIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAF 340
           A+RRY +DKPDLR P+ + ++ +   +S F+VF+ + + + G  V A+   GG    R  
Sbjct: 119 AMRRYASDKPDLRIPLELVDIDDLVKNSGFKVFASVAAQDNG-RVVALKIPGGAKLTRKE 177

Query: 341 CDRMNEWARSQGQPGLAYIFWRLDESGNVAGM-GPVAKHLNI-------VNTEAIRVRLD 392
            D    +    G  GLAYI  +++++ NV G+  P+ K L         +  + I+ R+D
Sbjct: 178 IDDYTAYVARYGAKGLAYI--KVNDATNVEGLQSPIVKFLTTEGGAEGAIALDIIK-RVD 234

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            Q+GD  FF A             R  +  +L ++ C+ +   W++DFP +E++E++ + 
Sbjct: 235 AQNGDLIFFGADKASIVNDAIGALRIKVGHDLNMLTCD-WAPLWVVDFPMFEYDEKDGRW 293

Query: 453 DFAHNPFTMPQ-GGMESLKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              H+PFT P+   ++ L  N  D+LS     YD+V NG EI  G IR H  ++  + F 
Sbjct: 294 YSMHHPFTQPKTANLDELDTNPGDVLS---RAYDMVLNGTEIGGGSIRIHRDDMQQRVFK 350

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           ++GI  E  + +FG L  A + G PPHGGIA G+DR++ML+ GAK++R+V  FP +Q   
Sbjct: 351 SLGIGAEEAQEKFGFLLNALKYGCPPHGGIAFGLDRLIMLMAGAKSIRDVMAFPKTQTAW 410

Query: 570 DLLMGSPSTVSVEQLRELGLR 590
             L  +PS  S  QLREL +R
Sbjct: 411 CPLTDAPSEASEAQLRELHIR 431


>gi|308190115|ref|YP_003923046.1| aspartate--tRNA ligase [Mycoplasma fermentans JER]
 gi|307624857|gb|ADN69162.1| aspartate--tRNA ligase [Mycoplasma fermentans JER]
          Length = 556

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 203/582 (34%), Positives = 302/582 (51%), Gaps = 48/582 (8%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
            +L   D G  V L GWV   R  G + F+D+RD YGITQ V       F+   +V  E 
Sbjct: 9   NELSAKDKGKKVTLHGWVANKRRFGEMTFIDLRDRYGITQCV-------FKTDLNVTKES 61

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKY 128
            + I G V+ R  +  N N+ TG IE+   K  I S A EELP  +  + +  E  R KY
Sbjct: 62  SMEIIGKVVLRKQK--NPNLATGDIEVVVDKYTIFSEANEELPFAIRDDIDVKEETRMKY 119

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           RFLDLRR  + +NI+ + +I+ ++R  M   +FI+  TP+L  S+PEGARDFLVP+R N+
Sbjct: 120 RFLDLRRPVMQQNIITKDKIMFAVREFMHQNDFIDIETPMLAKSTPEGARDFLVPTR-NR 178

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             F+ALPQ+PQ +KQLLM SGF++Y+Q A CFRDED R DR P EF QLD+E SF+  +D
Sbjct: 179 DEFWALPQSPQLFKQLLMCSGFEKYYQFARCFRDEDSRKDRQP-EFTQLDIETSFLNVED 237

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
               +E + + +F+  S G  +   F R+ Y DA+R YGTDKPDLR    + ++ +  ++
Sbjct: 238 FQKYIEKLFKHIFK--SIGIKIKTPFPRVKYFDALRDYGTDKPDLRYDYKIVDINDFCLN 295

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++F +     S    +    I  K       F D + E A+      L Y  +   E+G 
Sbjct: 296 TDFNIIKDAPSKRMLFVDTLITKKD------FKD-LEEIAKKNKANILFYFVY---ENGE 345

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +          N V   A+ +  + ++ +  +FI           A+  +H +Q LG + 
Sbjct: 346 IVHTN----FANKVKDAALELVKNNKNKNGSYFIV----------ANTYDHASQALGAVR 391

Query: 429 CNCFE----------FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
               E            WI D+P +E++EE      AH+PFT     +E L   ++  ++
Sbjct: 392 VELNERFNYARKEWNLSWITDWPMFEYDEENNTWAAAHHPFTRFAHSLEELDKIEMKDVR 451

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NGFE+ SG  R    +   + F  +G+S++  ++RF    +AF  G+PPH G
Sbjct: 452 ALSYDLVLNGFELGSGSARIFDKKTQKKMFDLIGMSEKEQQSRFDWFLKAFDYGIPPHCG 511

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
           I  G+ +I      +KN      FP +    D+  G+P +V 
Sbjct: 512 IGLGLWQIDNDYYRSKNNSWCYAFPKNAKNQDVFTGAPGSVD 553


>gi|66826455|ref|XP_646582.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74997394|sp|Q55C99|SYDM_DICDI RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; Flags:
           Precursor
 gi|60474489|gb|EAL72426.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 692

 Score =  320 bits (820), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 204/625 (32%), Positives = 314/625 (50%), Gaps = 51/625 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF----- 59
           R+HSCG++   D+G  V + GW++ +R  G  +FL IRD +G  Q   +    C      
Sbjct: 76  RSHSCGEITSKDIGKEVIIYGWINSLRNLGDNVFLVIRDGHGKVQCYVDLKQQCILKSSV 135

Query: 60  ------------EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
                       E  K  + E ++ I G V++R    +N N+ TG+IE+S  ++++L+  
Sbjct: 136 PNIDINERNSIEENIKLFKLESIVSIKGKVIARPERMVNKNMSTGEIEISVDQLQLLNNC 195

Query: 108 EELPLPV-FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
            +LP  V        E +R KYR++DLRRD +  NI  R+++  + R  +I + FIE  T
Sbjct: 196 VDLPFTVEHDSTAVSEELRLKYRYVDLRRDKVQSNIRLRSKVAMAARNYLINQQFIEVET 255

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P L   +PEGAR++LVP+R +QG FY+LPQ+PQQYKQLLM  G DRYFQ+A C+RDED R
Sbjct: 256 PTLFRPTPEGAREYLVPTR-HQGQFYSLPQSPQQYKQLLMVGGIDRYFQLARCYRDEDLR 314

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           SDR P EF Q+DME+SFV    I   +E +++ +++E   G  +   F    Y+  +  Y
Sbjct: 315 SDRQP-EFTQIDMELSFVNTQMIYRIIEGLVKTLWKE--AGFNIDYEFPFYTYEQVLSTY 371

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           G DKPD R  + + ++T+ F   E    +F   LS        + P          C ++
Sbjct: 372 GIDKPDTRYDMKLVDITDCFNKDETNINLFKNALSQASNNFKESKPV-------IKCIKL 424

Query: 345 NEWARSQGQPGLAYIFWRLDE------SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398
           ++   +     L  I    +         N      ++K ++      I  R+++++GD 
Sbjct: 425 DQVLPTLKSKHLDQITTESNSIITVQIKSNNEWKSLISKSISEQEKTLITERMNLKEGDV 484

Query: 399 CFFIAGDPLKFCSFAADARNHIA-----QELGIINCNCFEFCWIMDFPFY---EWNEEEK 450
                G   +  S     R + A       L  ++   F F W++DFP +   ++  E+ 
Sbjct: 485 LLISVGPRFQVESTLGKTRIYCANLLKELNLLKLDPQQFNFLWVVDFPLFTPSDYMNEQS 544

Query: 451 KIDFAHNPFTMPQGGMESLKGN------DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
            +   H+PFT P      L  N      D   I+   YD+V NG E+  G IR H S+V 
Sbjct: 545 ALLSTHHPFTAPHPEDIDLLLNPLSTPSDYSKIRGQHYDIVINGVELGGGSIRIHNSDVQ 604

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           L+    V   +  +  RF  L  A   G PPHGGIA G DR+  LL+ + ++R+V  FP 
Sbjct: 605 LRVLEKVLKLEPHMVQRFNHLLTALSMGCPPHGGIALGFDRLCSLLVNSNSIRDVIAFPK 664

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGL 589
           +    +L+  SP+TV+  +L EL L
Sbjct: 665 TSGGKELMTSSPATVTKSELDELFL 689


>gi|332757665|gb|EGJ87998.1| aspartyl-tRNA synthetase [Shigella flexneri 2747-71]
          Length = 497

 Score =  320 bits (819), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 186/498 (37%), Positives = 275/498 (55%), Gaps = 8/498 (1%)

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157
           A  + I++ A+ LPL         E  R KYR+LDLRR  + + +  R +I + +R  M 
Sbjct: 3   ASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMD 60

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
              F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI 
Sbjct: 61  DHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIV 120

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
            CFRDED R+DR P EF Q+D+E SF+    +   ME ++R ++ E    +    +F  +
Sbjct: 121 KCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDL--GDFPVM 177

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG- 336
            + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + +P   V A+   GG   
Sbjct: 178 TFAEAERRYGSDKPDLRNPMELADVADLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASL 236

Query: 337 NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
            R   D    + +  G  GLAYI       G      PVAK LN    EAI  R   QDG
Sbjct: 237 TRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDG 296

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D  FF A +              + ++LG+ + + +   W++DFP +E ++ E  +   H
Sbjct: 297 DMIFFGADNKKIVADGMGALLLKVGKDLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMH 355

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +PFT P+    +       +  A  YD+V NG+E+  G +R H  ++    F  +GI++E
Sbjct: 356 HPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEE 415

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
               +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+  +P
Sbjct: 416 EQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAP 475

Query: 577 STVSVEQLRELGLRIVEN 594
           S  +   L EL +++V+ 
Sbjct: 476 SFANPTALAELSIQVVKK 493


>gi|333004741|gb|EGK24263.1| aspartyl-tRNA synthetase [Shigella flexneri K-218]
          Length = 497

 Score =  319 bits (818), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 186/498 (37%), Positives = 275/498 (55%), Gaps = 8/498 (1%)

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157
           A  + I++ A+ LPL         E  R KYR+LDLRR  + + +  R +I + +R  M 
Sbjct: 3   ASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMD 60

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
              F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI 
Sbjct: 61  DHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIV 120

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
            CFRDED R+DR P EF Q+D+E SF+    +   ME ++R ++ E    +    +F  +
Sbjct: 121 KCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDL--GDFPVM 177

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG- 336
            + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + +P   V A+   GG   
Sbjct: 178 TFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASL 236

Query: 337 NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
            R   D    + +  G  GLAYI       G      PVAK LN    EAI  R   QDG
Sbjct: 237 TRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDG 296

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D  FF A +              + ++LG+ + + +   W++DFP +E ++ E  +   H
Sbjct: 297 DMIFFGADNKKIVADGMGALLLKVGKDLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMH 355

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +PFT P+    +       +  A  YD+V NG+E+  G +R H  ++    F  +GI++E
Sbjct: 356 HPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEE 415

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
               +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+  +P
Sbjct: 416 EQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAP 475

Query: 577 STVSVEQLRELGLRIVEN 594
           S  +   L EL +++V+ 
Sbjct: 476 SFANPTALAELSIQVVKK 493


>gi|298346860|ref|YP_003719547.1| aspartate--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|298236921|gb|ADI68053.1| aspartate--tRNA ligase [Mobiluncus curtisii ATCC 43063]
          Length = 448

 Score =  319 bits (818), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 175/447 (39%), Positives = 258/447 (57%), Gaps = 23/447 (5%)

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           M    F+E  TP LT S+PEGARDF+VP+R+  GS+YALPQ+PQ +KQLLM  G +RYFQ
Sbjct: 1   MEEHEFLEIETPTLTRSTPEGARDFVVPARIRPGSWYALPQSPQLFKQLLMVGGMERYFQ 60

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +A C+RDED R+DR P EF QLDMEMSFV+QDD++   E++L+ +++    G  ++    
Sbjct: 61  LARCYRDEDSRADRQP-EFTQLDMEMSFVDQDDVIEVTEHLLKEIWKVI--GYDLTTPIP 117

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
           R+ + +A+ R+G+DKPDLR    + ++T+ F  + F++F       P      +P  G  
Sbjct: 118 RMPFQEAMDRFGSDKPDLRFGYELVDLTDFFKDTPFKIFQA-----PYVGAVVMPGGGSQ 172

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             R F D+  EWA+++G  GLAY+   LDE G     GPVAK+++      +      Q 
Sbjct: 173 PRRTF-DKWQEWAKARGAKGLAYV--TLDEKGEAG--GPVAKNISDAEKVGLAAATGAQP 227

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWN-EEEKKIDF 454
           GD  FF AGD     +    AR  I +   +I+   + F W++D P ++ + E E + D 
Sbjct: 228 GDCIFFAAGDKTASQTLLGAARLEIGKRCDLIDEKAWAFTWVVDAPLFKPSGEAEAEGDV 287

Query: 455 A---------HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML 505
           A         H+ FT P+         D  S  A+ YD+VCNG E+  G IR H  ++  
Sbjct: 288 ALGHSAWTAVHHAFTSPKPECLDTFDTDPGSALAYAYDIVCNGVELGGGSIRIHRRDIQE 347

Query: 506 QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           + F  +G S+E  + RFG L  AF+ G PPHGG+A G DRI  +L G+ ++R+V  FP +
Sbjct: 348 RVFKVMGFSQEEAQARFGFLLDAFKYGAPPHGGLALGWDRIAGMLTGSPSIRDVIAFPKA 407

Query: 566 QNFCDLLMGSPSTVSVEQLRELGLRIV 592
            +  D L G+P+ ++ EQ +E G+  V
Sbjct: 408 GDGLDPLTGAPAPITDEQRKETGVDYV 434


>gi|329123658|ref|ZP_08252218.1| aspartate--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327469857|gb|EGF15322.1| aspartate--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 518

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 185/492 (37%), Positives = 277/492 (56%), Gaps = 9/492 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++ LPL     +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELCIYNASDVLPLDF--NQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++  ++            F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHDLW--LDTIGVDLGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF++  + NP   V  I    G    R   D   ++    G  GLA+    
Sbjct: 298 DIVKDVDFKVFNEPAN-NPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+ K LN    +A+  R++ Q GD  FF A             R  + +
Sbjct: 357 DINAGLEGVQSPITKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGR 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+   + ++  W++DFP +E  +EE  +   H+PFT P+         D  S  A  Y
Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFE-RDEEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAY 475

Query: 483 DLVCNGFEIASG 494
           D+V NG+E+  G
Sbjct: 476 DMVINGYEVGGG 487


>gi|296479006|gb|DAA21121.1| aspartyl-tRNA synthetase, mitochondrial precursor [Bos taurus]
          Length = 651

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 204/601 (33%), Positives = 325/601 (54%), Gaps = 31/601 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +   IFL +RD +G+ QVV   D +   + K 
Sbjct: 47  RTNTCGELRSSHLGQEVTLCGWIQFRRQN---IFLVLRDFHGLVQVVIPQDESAASVKKI 103

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  ++L+  ++LP  +    +  
Sbjct: 104 LCEAPMESVVQVSGTVISRPPGQKNPKMPTGEIEIKVKTAKLLNSCKKLPFEIKDFMKKT 163

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 164 ETLRLQYRYLDLRSVQMQYNLRLRSQMVMKMREYLCNL--HGFVDVETPTLFKRTPGGAK 221

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +F++PSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 222 EFVIPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 279

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  + + +E +L+  +   S+ + +   F  + + +A+  YGTDKPD R  + 
Sbjct: 280 IEMSFVDQTGVQSLIEGLLQ--YSWPSDKDPLVVPFPSMPFAEALASYGTDKPDTRFGMK 337

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356
           + ++++ F ++E       LS  P   V AI  + G     R   + + ++A       +
Sbjct: 338 IVDISDMFRNTEVGFLQDALS-KPQGTVKAICIRKGAKYLKRKDIESIRKFAADHFNEEV 396

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
             IF + +E+ N     PVAK +       +   L+ Q+ D     AG+  K CS     
Sbjct: 397 LPIFLKTNENWN----SPVAKFIMEEQGLGLVKLLETQEEDVVLLTAGEHKKACSLMGKL 452

Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470
           R   A  L   G++  +   F F W++DFP +   EE  ++++ AH+PFT P      L 
Sbjct: 453 RLECADLLEARGVVLRDPALFSFLWVVDFPLFLPKEENPQELESAHHPFTAPHPSDIHLL 512

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             +   +++  YDLV NG EI  G IR H SE  LQ +    + KE V+     L +A  
Sbjct: 513 YTEPHKVRSQHYDLVLNGNEIGGGSIRIHNSE--LQHYVLDTVLKEDVK-LLSHLLQALD 569

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR++ L+ GA ++R+V  FP S    DL+  +P ++  E+L+   ++
Sbjct: 570 YGAPPHGGIALGLDRLMCLVTGAPSIRDVIAFPKSFRGHDLMSNAPDSIPPEELKPYHIQ 629

Query: 591 I 591
           +
Sbjct: 630 V 630


>gi|322783669|gb|EFZ11007.1| hypothetical protein SINV_08262 [Solenopsis invicta]
          Length = 616

 Score =  315 bits (806), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 208/599 (34%), Positives = 314/599 (52%), Gaps = 46/599 (7%)

Query: 1   MHRY--RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA- 57
           ++RY  RTH+CG+L + ++G  VRLSGW+   R    II   +RD YG TQ++   D   
Sbjct: 31  VNRYVLRTHTCGELTLKNIGEEVRLSGWMEFQRMRKFII---LRDAYGSTQLLIPEDRKD 87

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             EI +++  E VL + G V+ R  +  N  + TG IE+  + +E+L+VA + P P+F  
Sbjct: 88  LVEIVQNLSYESVLSVVGKVVPRPEDQQNRRMKTGDIEVYVESLEVLNVASQNP-PIFI- 145

Query: 118 REY---PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASS 173
           R+Y    ES + K+R+L LR   + +N+  R+ +I  MR  +I E +F++  TP L  S+
Sbjct: 146 RDYNKAKESQQMKFRYLSLRYPEMQRNLRLRSSLIMKMREFLINECSFVDVETPTLFKST 205

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           P GA++F+VP+R  +G+FY+L Q+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P E
Sbjct: 206 PGGAQEFVVPTR-QRGNFYSLVQSPQQFKQLLMVGGLDRYFQVARCYRDESARHDRQP-E 263

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F QLD+EMSFV++D +++ +EN+L   + E     ++   F  + Y+D ++ YGTD+PDL
Sbjct: 264 FTQLDIEMSFVDRDGVMSLIENLLMYSWPE----ESIKVPFKLMMYEDVMKTYGTDQPDL 319

Query: 294 RNPIIMHNVTEHF--------VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
           R P  + ++T  F        V  E +       V P    +   +   G ++   D  +
Sbjct: 320 RIPYQIQDLTHMFDLPVLMEAVKHEDKQQKVYALVFPNQSKYLTKSIRDGLSKIRSDYFS 379

Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG- 404
             A    Q  +    WR          G +A+ L+            +Q+GD+     G 
Sbjct: 380 --ATKLIQLKIENDSWRTQLDKLKPKSGAIAEDLSQY--------CKLQEGDAVLLAIGR 429

Query: 405 --DPLKFC-SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
             D LK       +  N +  +   I  +  EF WI DFP + +  E   ++  H+PFT 
Sbjct: 430 RMDALKLLGKLRVEFTNTLEAKGEQIRSSENEFLWITDFPLFTF--EGTTLESTHHPFTQ 487

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P          D L ++   YDLV NG EIA G IR H + +  Q    + I     E +
Sbjct: 488 PHPDDMEYLTTDPLKVRGLHYDLVMNGSEIAGGSIRIHDANLQRQILRMLNID----ETK 543

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
              +  A   G PPHGGIA G+DR+V LL   K++R V  FP +    DL+ G+P  +S
Sbjct: 544 LSHMLEALTYGAPPHGGIAIGLDRLVCLLCNEKSIRNVIAFPKTIEGRDLMSGAPDVIS 602


>gi|73961347|ref|XP_547457.2| PREDICTED: similar to aspartyl-tRNA synthetase 2 (mitochondrial)
           [Canis familiaris]
          Length = 652

 Score =  315 bits (806), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 203/601 (33%), Positives = 325/601 (54%), Gaps = 31/601 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +   +FL +RD +G+ QVV   D +   + K 
Sbjct: 48  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---VFLVLRDSHGLIQVVIPQDESAASVKKI 104

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 105 LCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNSCKKLPFEIKDFVKKT 164

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 165 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDVETPTLFKRTPGGAK 222

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +F++PSR   G FY LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 223 EFVIPSR-EPGKFYCLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 280

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I + +E +L+  +   S+ + V   F  + + +A+  YGTDKPD R  + 
Sbjct: 281 IEMSFVDQTGIQSLIEGLLQ--YSWPSDKDPVVVPFPSMTFAEALASYGTDKPDTRFGMK 338

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356
           + +++  F ++E       LS  P   V A+    G     R   + + ++A       +
Sbjct: 339 IVDISNVFRNTEVGFLQDALS-KPQGTVKAMCISEGAKYLKRKDIESIRKFAADHFNQEV 397

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
             IF + + + N     PVAK +       +   +++Q+ D     AG+  K CS     
Sbjct: 398 LPIFLKANRNWN----SPVAKSIMEEQRSGLTRLMEIQEDDVVLLTAGEHKKACSVLGKL 453

Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470
           R   A  L   G++  +   F F W++DFP +   EE+ +K++ AH+PFT P      L 
Sbjct: 454 RLECADLLEARGLVLRDPALFSFLWVVDFPLFLPKEEKPEKLESAHHPFTAPHPSDVQLL 513

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            ++   +++  YDLV NG EI  G IR H +E  LQ +    + KE V+     L +A +
Sbjct: 514 YSEPEKVRSQHYDLVLNGNEIGGGSIRIHDAE--LQRYILAELLKEDVK-LLSHLLQALE 570

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR++ L+ GA ++R+V  FP S    DL+  +P ++  E+L+   ++
Sbjct: 571 FGAPPHGGIALGLDRLICLVTGAPSIRDVIAFPKSFRGHDLMSNAPDSLPPEELKPYHIQ 630

Query: 591 I 591
           +
Sbjct: 631 V 631


>gi|194210315|ref|XP_001493136.2| PREDICTED: aspartyl-tRNA synthetase 2, mitochondrial [Equus
           caballus]
          Length = 652

 Score =  315 bits (806), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 204/601 (33%), Positives = 323/601 (53%), Gaps = 31/601 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD +G+ Q+V   D +   + K 
Sbjct: 48  RTNTCGELRSSHLGQEVTLFGWIQYRRQN---TFLVLRDFHGLIQLVIPQDESAASVKKI 104

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 105 LCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNSCKKLPFEIKDFVKKT 164

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 165 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKKTPGGAK 222

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +F+VPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 223 EFVVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 280

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I + +E +L+  +    + + V   F  + + +A+  YGTDKPD R  + 
Sbjct: 281 IEMSFVDQTGIQSLIEGLLQ--YSWPRDKDPVVVPFPSMTFAEALATYGTDKPDTRFGMK 338

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           + ++++ F ++E R    +LS   G  +   IP       R   + + + A       + 
Sbjct: 339 IVDISDVFRNTEVRFLQDVLSKPKGTVKAIRIPEGAKYLKRKDIESIRKVAADHFNQEVL 398

Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +F +     N     PVA+  L   + E IR+ +++Q+ D     AG+  K CS     
Sbjct: 399 PVFLKASRHWN----SPVAEFILEKQSLELIRL-MELQEEDVILLTAGEHRKACSLLGKL 453

Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEEK-KIDFAHNPFTMPQGGMESLK 470
           R   A  L   G++  +   F F W++DFP +   EE   +++ AH+PFT P      L 
Sbjct: 454 RLECADLLEARGVVLRDPALFSFLWVVDFPLFLPKEENPGELESAHHPFTAPHPSDIQLL 513

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             +   +++  YDLV NG EI  G IR H +E  LQ +    + KE V+     L +A  
Sbjct: 514 YTEPEKVRSQHYDLVLNGSEIGGGSIRIHDAE--LQRYILATLLKEDVK-LLSHLLQALD 570

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR++ L+ GA ++R+V  FP S    DL+  +P ++  E+L+   +R
Sbjct: 571 YGAPPHGGIALGLDRLICLVTGAPSIRDVIAFPKSFRGYDLMSNAPDSIPPEELKPYHIR 630

Query: 591 I 591
           +
Sbjct: 631 V 631


>gi|224058910|ref|XP_002190760.1| PREDICTED: aspartyl-tRNA synthetase 2, mitochondrial [Taeniopygia
           guttata]
          Length = 624

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 211/600 (35%), Positives = 315/600 (52%), Gaps = 29/600 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61
           RT++CG+L  + VG  V L GWV   R  G  +FL +RD  G+TQVV   D A     E+
Sbjct: 29  RTNTCGELRAAHVGQKVTLYGWVQYQR-QG--LFLVLRDFQGLTQVVIPQDEAHSHVKEL 85

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             +   E V+ + G V  R     N  + TG IE+ A+  EIL+  ++LP  +    +  
Sbjct: 86  LSNAPVESVVRVTGTVSPRPLGQENPKMPTGDIEVKAESAEILNSCKKLPFEIKDFIKKS 145

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   L   +  R+R++  MR   C +    F++  TP L   +P GA+
Sbjct: 146 EALRMQYRYLDLRSSRLQNALRLRSRVVMRMREYLCNL--HGFVDVETPTLFKRTPGGAK 203

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 204 EFLVPSR-EAGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 261

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I   +E +L+  + E     ++   F  + Y++A+  YGTDKPD R  + 
Sbjct: 262 IEMSFVDQAGIQRLIEGLLQHSWPE--ERGSIMTPFPSMTYEEALAGYGTDKPDTRFGMK 319

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           + ++++    S  +     LS   G      IP           + + E A+SQ    + 
Sbjct: 320 IMDISDVLRGSNIQFLQNALSYPHGSIRAICIPQGVRYLTNKDLESLKESAKSQFNQEIM 379

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
            I  R D  G++  +  + K L       +   L+MQ+GD     AG+  + CS     R
Sbjct: 380 EIIRRPD--GSLKSL--LTKFLGEKEQSELIQALNMQEGDVVLLAAGEHKQVCSALGALR 435

Query: 418 ----NHI-AQELGIINCNCFEFCWIMDFP-FYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
               N + A  L + +   F F W++DFP F    E   +++ AH+PFT P     SL  
Sbjct: 436 LLSANLLEAAGLALRDPTAFHFLWVVDFPLFLPKAENPTELESAHHPFTAPHPSDVSLLY 495

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +D   +++  YDLV NG E+  G IR H +E   Q F    + KE  E     L  A + 
Sbjct: 496 SDPTKVRSQHYDLVLNGNEVGGGSIRIHSAEQ--QRFVLEKVLKEDSEV-LSHLIEALEF 552

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR++ L++ A ++R+V  FP S    D++  +P  V+ E+L    +++
Sbjct: 553 GAPPHGGIALGLDRLISLIVDAPSIRDVIAFPKSFRGRDVMGNAPDYVTPEELEPYHIQV 612


>gi|296280702|gb|ADH04645.1| unknown [Sorangium cellulosum]
          Length = 587

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 196/572 (34%), Positives = 301/572 (52%), Gaps = 30/572 (5%)

Query: 46  GITQVVANPD--SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEI 103
           G  +  A P+  +A   +A++VR EWV+ + G+V+ R  + +N  + TG+IE+   +  +
Sbjct: 6   GSGEPYATPEQLAASLRLAETVRREWVIGVRGVVVHRGEQNVNPKLATGEIEVRVAEAVM 65

Query: 104 LSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
            + A+  P  +  +    E IR +YR+LDLRR  L + +  R  +  + R  +  +  +E
Sbjct: 66  FNRADNPPFSIEDDIRTDEEIRLQYRYLDLRRTPLQRALRMRHEVNRATRNYLSDQGCLE 125

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             TP L   +P GAR+FLVPSRV+ G FYAL ++PQ YKQL M +GFDRYFQI  CFRDE
Sbjct: 126 LETPFLVKYTPGGARNFLVPSRVSAGKFYALAESPQLYKQLFMVAGFDRYFQIVKCFRDE 185

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV----SNNFLRICY 279
           D R DR P EF Q+D+E+SFV QDD+   +E ++  VF+     +      +  F ++ Y
Sbjct: 186 DLRIDRQP-EFTQIDVELSFVNQDDVFRLIEGLVFAVFKAALGKDLTELYPTGRFPQMPY 244

Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTEHFVH------------SEFRVFSKILSVNPGYEVW 327
            +++ R+G DKPDLR  I   ++T+  +             +E     K+    P   V 
Sbjct: 245 AESMARFGNDKPDLRFGIEHTDLTDLIIEHGGGGVPLWVELAEKYRSGKLRRDVPAEIVK 304

Query: 328 A--IPAKGGGGNRAFCDRMNEWARS-QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
           A  IPA     +R   + +    R  +G  GLA    +L E G+     P++K +     
Sbjct: 305 ALVIPAS-ANLSRQQTEELERGLRDVKGFRGLARA--KLAEDGSWT-QSPLSKSITPELR 360

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII----NCNCFEFCWIMDF 440
             +  +L  + GD   F  G      +  A  R  IA+++G+I    + + + F W+ + 
Sbjct: 361 RQLNEKLGARPGDILCFQFGKAAVVHTVMAKLRVDIAKKIGLIPEYGHGDQWRFLWVTNP 420

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +E +EE  +   AH+ FT P      L   D   ++ ++YDLV NGFE+  G IR H 
Sbjct: 421 PLFELDEETGRWAAAHHAFTRPIDEHVPLLEADPARVECYRYDLVLNGFELGGGSIRLHD 480

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            +V  + F  +GI +    ++FG L  A + G PPHGGIA G+DR+ MLL  A  +R+V 
Sbjct: 481 PDVQARVFRTLGIDEGDARDKFGFLLDALRSGAPPHGGIALGMDRLAMLLGSAPTLRDVI 540

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            FP +    D + G+P TV   QL EL ++ V
Sbjct: 541 PFPKTNQGTDQMTGAPVTVDAAQLAELNVKTV 572


>gi|195999082|ref|XP_002109409.1| hypothetical protein TRIADDRAFT_20832 [Trichoplax adhaerens]
 gi|190587533|gb|EDV27575.1| hypothetical protein TRIADDRAFT_20832 [Trichoplax adhaerens]
          Length = 612

 Score =  313 bits (803), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 214/622 (34%), Positives = 325/622 (52%), Gaps = 59/622 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPH-GGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           R+H+CG L   D G  V+L GWV  +R    G  FL + D YG TQ+     S  + I +
Sbjct: 7   RSHTCGQLRKEDAGQEVKLYGWVRHIRRFVNGPFFLTLHDAYGSTQLFVKKTSPVYNILE 66

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-- 121
            +  E V+ I G V +R    IN ++ TG+IE+    + I++ AEELP+ V  ++ Y   
Sbjct: 67  KLSVESVIGITGTVNARPENMINKDMPTGEIEVVVDNVNIVNQAEELPIQV-SDKGYKAK 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
           + ++ +YR++DLR   L +N+  R+ I+ +MR  +I    F E  TP L   +PEGAR+F
Sbjct: 126 DELKLQYRYVDLRSSNLQQNLRLRSNIVMAMRKFLIDRAGFAEVETPTLFKRTPEGAREF 185

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R  +  FY L Q+PQQ+KQLLM  G DRYFQ A C+RDED R+DR P EF QLD+E
Sbjct: 186 LVPTRQPE-LFYTLVQSPQQFKQLLMVGGLDRYFQFARCYRDEDSRADRQP-EFTQLDLE 243

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q DI + +E+++  ++    +  +    F R+ + DA+ +YG+DKPD+R  + +H
Sbjct: 244 MSFVNQYDIQSLIEDMIHDIWPITGHKLSTPIPFPRMSFADAVTKYGSDKPDVRFDMKIH 303

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++TE  V   F V S   +      +  IP   GG N+   ++++++        +  + 
Sbjct: 304 DITEA-VGYLFDVDSSSKATVKASMI-VIP---GGENKEL-NQIHDFVDKNDTGKITMLR 357

Query: 361 WRLDES--GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK---------- 408
            R D S  GN++    +     + N +AI+       GD     AG   K          
Sbjct: 358 IREDGSWKGNISSDFQLKLKSQLQNEKAIK------PGDLVILSAGVNYKPNLLLGKLRL 411

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE-EKKIDFAHNPFTMPQGGME 467
           FC+   +A+      + + + N F+F W+ DFP +  N+E +  I+  H+PFT P     
Sbjct: 412 FCADLLEAKG-----IQLRDPNEFKFLWVEDFPLFTLNDESDSMIESTHHPFTAPVAEDV 466

Query: 468 SLKGND-------------------LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           ++   D                    LS+    YDLV NG E+  G IR H   +  Q F
Sbjct: 467 NILFTDPLKVSSAIYLCTHNVILIASLSVLGQHYDLVLNGNEVGGGSIRVHDFNLQTQIF 526

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             +    +V  ++F  L +  + G PPHGGIA G DR + +L  + ++R+V  FP S + 
Sbjct: 527 EKI---LKVNASQFKHLLKGLKSGCPPHGGIALGFDRFMAVLCNSSSLRDVIAFPKSASG 583

Query: 569 CDLLMGSPSTVSVEQLRELGLR 590
            DLL  +PSTVS E L E  +R
Sbjct: 584 KDLLTEAPSTVSNEYLSEYHIR 605


>gi|332020819|gb|EGI61217.1| Aspartyl-tRNA synthetase, mitochondrial [Acromyrmex echinatior]
          Length = 651

 Score =  313 bits (802), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 211/598 (35%), Positives = 318/598 (53%), Gaps = 39/598 (6%)

Query: 1   MHRY--RTHSCGDLGVSDVGSFVRLSGWV--HRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           ++RY  RTH+CG+L + +VG  VRLSGW+   R+R      F+ +RD YG TQ++   D 
Sbjct: 65  VNRYVQRTHTCGELTLKNVGEEVRLSGWLEFQRMRK-----FITLRDSYGSTQLLIPEDR 119

Query: 57  A-CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               +I +++  E VL I G V+ R  +  N  + TG IE+  + +++L+ A + P PVF
Sbjct: 120 KDLIKIIQNLSFESVLSIIGKVVPRPEDKQNKKMKTGDIEIYVESLKVLNAASQNP-PVF 178

Query: 116 GEREY---PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTA 171
             REY    ES + KYR+L LR   L KN+  R+ +I  MR  +I E +F++  TP L  
Sbjct: 179 I-REYSKAKESQQMKYRYLSLRYPELQKNLRMRSSLIMRMREFLIHECSFVDIETPTLFK 237

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           S+P GA++F+VP+R   G FY+L Q+PQQ+KQLLM  G DRYFQIA C+RDE  R DR P
Sbjct: 238 STPGGAQEFVVPTR-QPGIFYSLVQSPQQFKQLLMIGGLDRYFQIARCYRDETVRHDRQP 296

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF QLD+EMSFV++D ++N +EN+L   + E     ++   F  I Y DA+  YGTDKP
Sbjct: 297 -EFTQLDIEMSFVDRDGVMNLIENLLMYSWPE--ELGSIKVPFKLITYKDAMELYGTDKP 353

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSV-NPGYEVWAI--PAKGGGGNRAFCDRMNEWA 348
           DLR    + ++T  F   +  V  + + + +   +V+A+    K     ++  D +++  
Sbjct: 354 DLRISYQIKDLTHMF---DLPVLKETMKLEDDKQKVYALVFSKKSKYLTKSIRDELSKIR 410

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG---D 405
                 G   +    +ES +        K  + +  + +     +Q+GD+     G   D
Sbjct: 411 NDYF--GTTKLVQLKNESNSWKTQLDKLKLKSGIIAKDVSQYCKLQEGDAVLLAIGYRMD 468

Query: 406 PLKFCSFAADARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
            LK          +I +  G  I  +  E  WI DFP + +   E+ ++ +H+PFT P  
Sbjct: 469 ALKLLGKLRTEFTNILEAKGEQIRSSEAELVWITDFPLFTF---EETLESSHHPFTQPHP 525

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D L ++   YDLV NG EIA G IR H + +  Q    + I     E +   
Sbjct: 526 EDMKYLTTDPLKVRGLHYDLVMNGSEIAGGSIRIHDANLQRQILGMLNID----ETKLSH 581

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           +  A   G PPHGGIA G+DR V +L   K+++ V  FP +    DL+ G+P  +S E
Sbjct: 582 MLEALTYGAPPHGGIAIGLDRFVCVLCNEKSIKNVIAFPKTMEGRDLMSGAPDIISDE 639


>gi|156121091|ref|NP_001095692.1| aspartyl-tRNA synthetase, mitochondrial precursor [Bos taurus]
 gi|182689573|sp|A6QPU5|SYDM_BOVIN RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; Flags:
           Precursor
 gi|151554225|gb|AAI49493.1| DARS2 protein [Bos taurus]
          Length = 651

 Score =  313 bits (801), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 204/601 (33%), Positives = 324/601 (53%), Gaps = 31/601 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +   IFL +RD +G+ QVV   D +   + K 
Sbjct: 47  RTNTCGELRSSHLGQEVTLCGWIQFRRQN---IFLVLRDFHGLVQVVIPQDESAASVKKI 103

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  ++L+  ++LP  +    +  
Sbjct: 104 LCEAPMESVVQVSGTVISRPPGQKNPKMPTGEIEIKVKTAKLLNSCKKLPFEIKDFMKKT 163

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 164 ETLRLQYRYLDLRSVQMQYNLRLRSQMVMKMREYLCNL--HGFVDVETPTLFKRTPGGAK 221

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +F++PSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 222 EFVIPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 279

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  + + +E +L+  +   S+ + +   F  + + +A+  YGTDKPD R  + 
Sbjct: 280 IEMSFVDQTGVQSLIEGLLQ--YSWPSDKDPLVVPFPSMPFAEALASYGTDKPDTRFGMK 337

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356
           + ++++ F ++E       LS  P   V AI  + G     R   + + ++A       +
Sbjct: 338 IVDISDMFRNTEVGFLQDALS-KPQGTVKAICIRKGAKYLKRKDIESIRKFAADHFNEEV 396

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
             IF + +E+ N     PVAK +       +   L+ Q+ D     AG+  K CS     
Sbjct: 397 LPIFLKTNENWN----SPVAKFIMEEQGLGLVKLLETQEEDVVLLTAGEHKKACSLMGKL 452

Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470
           R   A  L   G++  +   F F W++DFP +   EE  ++++ AH+PFT P      L 
Sbjct: 453 RLECADLLEARGVVLRDPALFSFLWVVDFPLFLPKEENPQELESAHHPFTAPHPSDIHLL 512

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             +   +++  YDLV NG EI  G IR H SE  LQ      + KE V+     L +A  
Sbjct: 513 YTEPHKVRSQHYDLVLNGNEIGGGSIRIHNSE--LQHCVLDTVLKEDVK-LLSHLLQALD 569

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR++ L+ GA ++R+V  FP S    DL+  +P ++  E+L+   ++
Sbjct: 570 YGAPPHGGIALGLDRLMCLVTGAPSIRDVIAFPKSFRGHDLMSNAPDSIPPEELKPYHIQ 629

Query: 591 I 591
           +
Sbjct: 630 V 630


>gi|77627987|ref|NP_001029315.1| aspartyl-tRNA synthetase, mitochondrial precursor [Rattus
           norvegicus]
 gi|115502848|sp|Q3KRD0|SYDM_RAT RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; Flags:
           Precursor
 gi|76779332|gb|AAI05775.1| Aspartyl-tRNA synthetase 2 (mitochondrial) [Rattus norvegicus]
 gi|149058269|gb|EDM09426.1| aspartyl-tRNA synthetase 2 (mitochondrial) [Rattus norvegicus]
          Length = 652

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 202/599 (33%), Positives = 319/599 (53%), Gaps = 27/599 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++CG+L  S +G  V L GW+   R +    FL +RD +G+ Q++   D +   + ++
Sbjct: 49  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDCHGLVQILIPQDESAASVRRT 105

Query: 65  V---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +     E V+ + G V++R     N  + TG+IE+ A+  E+L+  ++LP  +    +  
Sbjct: 106 LCEAPVESVVRVSGTVIARPLGQENPKMPTGEIEIKAKTAELLNACKKLPFEIKDFVKKT 165

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 166 EALRLQYRYLDLRSSQMQHNLRLRSQMVMKMREYLCTLHGFVDIETPTLFKRTPGGAKEF 225

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 226 LVPSR-EPGRFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 283

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I + +E +L   + E  + + +   F  + + +A+  YGTDKPD R  + + 
Sbjct: 284 MSFVDQTGIQHLVEGLLHYSWPE--DKDPLVAPFPSMTFAEALATYGTDKPDTRFGMKIV 341

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           ++++ F ++E R     L+  P   V AI    G     +   + + ++A       +  
Sbjct: 342 DISDVFRNTEIRFLQDALA-KPQGTVKAICVHEGAKYLRKEDIEFIRKFAAHHFSQEVLP 400

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IF  L+   N +   P AK +       +   +++Q+ D     AG   K CS     R 
Sbjct: 401 IF--LNARKNWS--SPFAKFITEEERLELTRLMEIQEDDMVLLTAGQHEKACSLLGKLRL 456

Query: 419 HIA-----QELGIINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGN 472
             A     + L + +   F F W++DFP +   EE   +++ AH+PFT P  G   L   
Sbjct: 457 ECADLLETRGLALRDPALFSFLWVLDFPLFLAKEESPTELESAHHPFTAPHPGDIHLLYT 516

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +   ++   YDLV NG EI  G IR H  +  LQ +    + KE V+     L +A   G
Sbjct: 517 EPEKVRGQHYDLVLNGNEIGGGSIRIH--DAQLQRYILETLLKEDVK-LLSHLLQALDYG 573

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            PPHGGIA G+DR+V L+ GA ++R+V  FP S    DL+  +P TVS E L+   + +
Sbjct: 574 APPHGGIALGLDRLVCLVTGAPSIRDVIAFPKSYRGHDLMSNAPDTVSPEDLKPYHIHV 632


>gi|296229763|ref|XP_002760400.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Callithrix
           jacchus]
          Length = 645

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 200/601 (33%), Positives = 324/601 (53%), Gaps = 31/601 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD +G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFHGLVQVIIPQDESAASVRKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPMESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFMKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I + +E +L+  +   ++ N V   F  + + +A+  YGTDKPD R  + 
Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKNPVVVPFPSMTFAEALATYGTDKPDTRFGMK 340

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           + ++++ F ++E       LS   G  +   IP       R   + + +++       + 
Sbjct: 341 IIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYFKRKDIESIRKFSADHFDQEIL 400

Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +F   + + N     PVA   + +   E IR+ ++ Q+ D     AG+  K CS     
Sbjct: 401 PVFLNTNRNWN----SPVANFIMELKRQELIRL-METQEEDVVLLTAGEHNKACSLLGKL 455

Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470
           R   A  L   G++  +   F F W++DFP +   EE  ++++ AH+PFT P      L 
Sbjct: 456 RLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLL 515

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             +   +++  YDLV NG EI  G IR H +E  LQ +    + KE V+     + +A  
Sbjct: 516 YTEPKKVRSQHYDLVLNGNEIGGGSIRIHNAE--LQQYILATLLKEDVK-LLSHMLQALD 572

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR++ ++ G+ ++R+V  FP S    DL+  +P ++  E+L+   ++
Sbjct: 573 YGAPPHGGIALGLDRLICVVTGSPSIRDVIAFPKSFRGHDLMSNTPDSIPPEELKPYHIQ 632

Query: 591 I 591
           +
Sbjct: 633 V 633


>gi|332219612|ref|XP_003258946.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Nomascus
           leucogenys]
          Length = 645

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 205/601 (34%), Positives = 321/601 (53%), Gaps = 31/601 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  I 
Sbjct: 283 IEMSFVDQTGIQSLIEGLLQYAWP--NDKDPVVIPFPTMTFAEALATYGTDKPDTRFGIK 340

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           + ++++ F ++E       LS   G  +   IP       R   + + ++A       + 
Sbjct: 341 IIDISDMFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAAHHFNQEIL 400

Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +F   + + N     PVA   +     E IR+ ++ Q+ D     AG+  K CS     
Sbjct: 401 PVFLNANRNWN----SPVANFIMESQRLELIRL-METQEEDVILLTAGEHNKACSLLGKL 455

Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470
           R   A  L   G++  +   F F W++DFP +   EE  ++++ AH+PFT P      L 
Sbjct: 456 RLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLL 515

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             +    ++  YDLV NG EI  G IR H +E  LQ +    + KE V+     L +A  
Sbjct: 516 YTEPKKARSQHYDLVLNGNEIGGGSIRIHNAE--LQHYILATLLKEDVK-MLSHLLQALD 572

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR++ L+ G+ ++R+V  FP S    DL+  +P +V  E+L+   +R
Sbjct: 573 YGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIR 632

Query: 591 I 591
           +
Sbjct: 633 V 633


>gi|114565506|ref|XP_524974.2| PREDICTED: aspartyl-tRNA synthetase, mitochondrial isoform 7 [Pan
           troglodytes]
          Length = 645

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 204/601 (33%), Positives = 322/601 (53%), Gaps = 31/601 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  + 
Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMK 340

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           + ++++ F ++E       LS   G  +   IP       R   + + ++A       + 
Sbjct: 341 IIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQEIL 400

Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +F   + + N     PVA   +     E IR+ ++ Q+ D     AG+  K CS     
Sbjct: 401 PVFLNANRNWN----SPVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKL 455

Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470
           R   A  L   G++  +   F F W++DFP +   EE  ++++ AH+PFT P      L 
Sbjct: 456 RLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLL 515

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             +    ++  YDLV NG EI  G IR H +E  LQ +    + KE V+     L +A  
Sbjct: 516 YTEPKKARSQHYDLVLNGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALD 572

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR++ L+ G++++R+V  FP S    DL+  +P +V  E+L+   +R
Sbjct: 573 YGAPPHGGIALGLDRLICLVTGSRSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIR 632

Query: 591 I 591
           +
Sbjct: 633 V 633


>gi|326435143|gb|EGD80713.1| hypothetical protein PTSG_01303 [Salpingoeca sp. ATCC 50818]
          Length = 695

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 199/613 (32%), Positives = 315/613 (51%), Gaps = 33/613 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH+CGD+ +S   + V L+GW+   R  G  ++F  +RDHYG  Q+    + A   +  
Sbjct: 93  RTHTCGDMTLSLADTSVSLTGWMASKRIIGDDLVFAVLRDHYGAVQLKLTGEDAIDRVT- 151

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----RE 119
           ++  E  + + G V +R A+ +N  + +G +E+    + +L  A   P  +  E     +
Sbjct: 152 NLPLESTIQVQGRVTARPADMVNPKMASGDVEVLVSSLAVLGTATNQPFQIGTEGSTTHK 211

Query: 120 YP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
            P E +R  +R LDLRR  LH  IV R R+ ++ R  +    F++  TP L   +P GA 
Sbjct: 212 LPKEDVRLTHRPLDLRRPALHNAIVTRARVASATRRFLEHHGFLDIETPTLFKRTPGGAA 271

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVP++  +G FYAL Q+PQQYKQ+LM  GFDRY+Q A C+RDE  R DR P EF Q+D
Sbjct: 272 EFLVPTQ-KKGLFYALVQSPQQYKQMLMVGGFDRYYQFARCYRDEGGRLDRQP-EFTQID 329

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EM+FV Q+D+L   E ++  +++E   G  +   F R+ + DA+ +YG+DKPD R  + 
Sbjct: 330 LEMAFVTQEDVLQLTEALVASMWKE-GCGVDIPTPFTRMSFHDAMAQYGSDKPDTRFDMK 388

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + + T+ F     RV+ + +S       +          R     + ++AR  G  G   
Sbjct: 389 ITDATDVFSPHAVRVWEQAMSHGGAIRGFKADKAAALFTRKNMKSLEDYAR--GIEGETV 446

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRV----RLDMQDGDSCFFIAGDPLKFCSFAA 414
           +F  +D+ G+V     + K ++ V+  +++     R   + GD+    A        F  
Sbjct: 447 VFVHVDDDGSV--RSSIFKDIDDVDVASVKRALVDRFQAKPGDAILLSAAQQSNLLPFLG 504

Query: 415 DARNHIA---QELGI--INCNCFEFCWIMDFPFYEWNEEEK-KIDFAHNPFTMPQGGMES 468
             R   A   Q+ G+  ++   F F W++DFP +E +E EK ++   H+PFT P      
Sbjct: 505 KLRTKAASMLQDAGLQQLDPKDFRFLWVVDFPLFEPHELEKGRLQACHHPFTAPHPDDAD 564

Query: 469 L---KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
           L    G      +A  +D+V NG E+  G IR H  ++ L    ++      V   F  L
Sbjct: 565 LVRAGGGAATRARAQHFDVVVNGVELGGGSIRVHDPDLQLHILKDILHEDPAV---FEQL 621

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLL---GAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
             A + G PPHGGIA G DR ++ +L   GA ++R+   FP S    +L+ GSPS V  E
Sbjct: 622 LGALRYGAPPHGGIALGFDRAMLCMLAQTGAVSLRDTMAFPKSFAGKELMSGSPSEVPRE 681

Query: 583 QLRELGLRIVENP 595
            L    ++ V++P
Sbjct: 682 DLLTYHVQTVDSP 694


>gi|291397254|ref|XP_002715040.1| PREDICTED: aspartyl-tRNA synthetase 2, mitochondrial [Oryctolagus
           cuniculus]
          Length = 646

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 207/602 (34%), Positives = 324/602 (53%), Gaps = 33/602 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +   IFL +RD +G+ Q+V   D +   + K 
Sbjct: 44  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---IFLVLRDFHGLVQIVIPQDESAASVKKI 100

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V++R     N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 101 LCEAPVESVVQVSGTVVARPPGQENPKMPTGEIEIKVKTAELLNSCKKLPFEIKDFVKKT 160

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   + +N+  R++++  MR   C +    FI+  TP L   +P GA+
Sbjct: 161 EALRLQYRYLDLRSFQMQRNLRLRSQMVMRMREYLCNL--HGFIDIETPTLFKKTPGGAK 218

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVPSR   G FY+LPQ+PQQ+KQLLM  GFDRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 219 EFLVPSR-EPGKFYSLPQSPQQFKQLLMIGGFDRYFQVARCYRDEGSRPDRQP-EFTQID 276

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I   +E +L+  +   S+   V+  F  + + +A+  YGTDKPD R  + 
Sbjct: 277 IEMSFVDQTGIQQLIEGLLQ--YSWPSDRGAVALPFPSMTFAEALATYGTDKPDTRFGMK 334

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356
           + +++  F ++E       LS  P   V AI   GG     R   + + ++A       +
Sbjct: 335 IIDISNVFRNTEIGFLQDALS-KPQGTVKAICVPGGAKYLKRKDIESIRKFAVDHFNQEV 393

Query: 357 AYIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
             +F +   + N     PVA+  +     E IR+ + +Q+ D     AG+  K CS    
Sbjct: 394 LPVFLKTSINWN----SPVAELIMEEQRLEFIRL-MQVQEDDVILLTAGEHQKACSLLGK 448

Query: 416 ARNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESL 469
            R   A  L   G++  +   F F W++DFP +   E+  ++++ AH+PFT P      L
Sbjct: 449 LRLECADLLEKKGVVLRDPALFSFLWVVDFPLFLPKEDNPRELESAHHPFTAPHPSDIHL 508

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              +   +++  YDLV NG EI  G IR H +E  LQ +    + KE V+     L +A 
Sbjct: 509 LYTEPEKVRSQHYDLVLNGSEIGGGSIRIHNAE--LQHYVLATLLKEDVK-LLSHLLQAL 565

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
             G PPHGGIA G+DR++ L+ G+ ++R+V  FP S    DL+  +P  V  E L+   +
Sbjct: 566 DYGAPPHGGIALGLDRLMCLVTGSPSIRDVIAFPKSFRGHDLMSSAPDCVPPEDLKPYHI 625

Query: 590 RI 591
           ++
Sbjct: 626 QV 627


>gi|328781302|ref|XP_001121020.2| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Apis
           mellifera]
          Length = 581

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 200/605 (33%), Positives = 325/605 (53%), Gaps = 39/605 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACF 59
           M++Y ++      ++     V L GW+   R +    FL +RD YG TQ ++        
Sbjct: 1   MYKYNSNHKKVSMITIQRENVHLYGWLEFSRINK---FLTLRDSYGSTQLIIPEHKKDLQ 57

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGER 118
           E+AK +  E VL I+G V+ R     N  + TG IE+  + I++L++A   LP  +    
Sbjct: 58  EMAKKLTFESVLSIEGKVLKRPKGQENKFMTTGDIEVEIKSIKVLNMANSNLPFIIRDYN 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGA 177
           +  ES + KYR++ LR   L KN+  R++++  MR  +I + NF++  TP L  ++PEGA
Sbjct: 118 KAKESTQMKYRYISLRYPQLQKNLRLRSKVVMKMREYLIKQCNFVDIETPTLFKNTPEGA 177

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           ++F+VP++   G FY+L Q+PQQ+KQLLM  GFDRYFQ+A C+R+E PR DR   EF QL
Sbjct: 178 QEFIVPTKF-PGQFYSLVQSPQQFKQLLMVGGFDRYFQLARCYRNEQPRHDR-QLEFTQL 235

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV+ + I+  +EN+L   + E S+  T+   F  + YD+A+  YGTDKPDLR P 
Sbjct: 236 DIEMSFVDCEGIMKLIENLLVYSWPEESHELTIP--FKCMKYDNAMELYGTDKPDLRIPQ 293

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN------EWARSQ 351
            ++ +TE   +S   +    +  +  +E++A+          F ++ N      + A S+
Sbjct: 294 QLYRLTETIDYSAL-IQDLKMEQSDKFEIYAL---------VFSEKYNFLTNSVKDAISK 343

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
            Q    + F +L ++  +    P    +  +  E ++ +L++++GD  F   G+ +    
Sbjct: 344 LQSN-YFPFVKLIQT-KIPNKSPF---ITSIIKENVQQQLNLKEGDVLFLACGEKVDTQL 398

Query: 412 FAADAR----NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
                R    N +  +   I     E  WI DFP + +N +   ++  H+PFT P     
Sbjct: 399 LLGKIRLEFTNFLENKGEKIRTIKDELLWITDFPLFSFNTKTNLLETMHHPFTQPHSDDV 458

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
            L   + L ++   YDLV NGFEIA G IR H S++  Q    + I+    E+    L  
Sbjct: 459 ELLVKNPLKVRGLHYDLVMNGFEIAGGSIRIHKSKLQKQILRMLKIN----ESSLMHLLD 514

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           A + G PPHGGIA G+DR++ LL   +N++ V  FP + +  DL+ G+P ++S E+ +  
Sbjct: 515 ALESGAPPHGGIAIGLDRLISLLCNEQNIKNVIAFPKTMSGRDLMSGAPISISEEEKQLY 574

Query: 588 GLRIV 592
            +R +
Sbjct: 575 HIRTI 579


>gi|269114962|ref|YP_003302725.1| Aspartyl-tRNA synthetase (Aspartate-tRNAligase) [Mycoplasma
           hominis]
 gi|268322587|emb|CAX37322.1| Aspartyl-tRNA synthetase (Aspartate-tRNAligase) [Mycoplasma hominis
           ATCC 23114]
          Length = 564

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 198/605 (32%), Positives = 319/605 (52%), Gaps = 50/605 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M     + CG L ++D+   V L GW+   R     +F+D+RD  G+ Q++    S    
Sbjct: 1   MKTMNKNYCGTLCINDLNKEVELCGWIANKRKFKQQVFIDLRDSSGVVQLIFQNVSDPL- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-- 118
               +  E  + + G V  R    +N  + TG+IE+     +I + A+++P  +   +  
Sbjct: 60  ----LTKESCIYVKGTVQKRLE--VNPALKTGEIEVIVSDYKIFNSAKQIPFEINNSKST 113

Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +  E IR +YRFLDLR + +  N+  R + +  +R     + +IE  TPIL  S+PEGA
Sbjct: 114 NDANEDIRLEYRFLDLREERMLNNLRLRHKFLLLVRNFFDKQGYIEVETPILGKSTPEGA 173

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVP+R  +G F+ALPQ+PQ +KQLLMA+GF++YFQIA  FRDED R DR P EF QL
Sbjct: 174 RDYLVPTR-RKGRFFALPQSPQLFKQLLMAAGFEKYFQIARVFRDEDLRKDRQP-EFTQL 231

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSF  Q++I    E++ + V  +   G  +   F ++ +  ++  YG DKPD R   
Sbjct: 232 DIEMSFGSQEEIFKLCEDMWKDVLSQL--GYKIETPFPKMDFFYSMAHYGNDKPDTRFGF 289

Query: 298 IMHNVTEHFVHSEFRVFSKIL----SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
           ++ + ++ F     + F K +    ++N   ++     K   G       + E  +++ Q
Sbjct: 290 LIEDYSKQFAAKYNKKFVKAIVFDRNINEHKQIINETFKKNNGQILDIFDLKEANQNEFQ 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
             L                   AK  NI    AI    D+++         D LK    +
Sbjct: 350 CLL-----------------DKAKEDNISTPWAIISANDLEE---------DALK----S 379

Query: 414 ADARNHIAQEL-GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKG 471
             A   IA +L  + + N   F W++++P +E++ E K    AH+ FT   +  M+ L+ 
Sbjct: 380 LGAIRTIANDLYKLADPNQLNFLWLVNWPMFEYDRETKTYSPAHHAFTQFEESTMKYLET 439

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            +L  ++A  YDLV NGFE+ SG IR +  ++  + F  + +S++  ++RFG   +AF+ 
Sbjct: 440 GELEKVRAKSYDLVLNGFELGSGSIRIYDPKIQKKMFDVINLSEKQQQDRFGFFLKAFEY 499

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+PPH GIA G++RI+M+L  ++++R+V  FP +    DLL  +PS V+ EQL E GL +
Sbjct: 500 GLPPHNGIAFGVERILMILTKSESIRDVIAFPKNAKGIDLLTSAPSDVTKEQLDEYGLEL 559

Query: 592 VENPK 596
             N K
Sbjct: 560 KINKK 564


>gi|290985078|ref|XP_002675253.1| tentative aspartyl-tRNA synthetase [Naegleria gruberi]
 gi|284088848|gb|EFC42509.1| tentative aspartyl-tRNA synthetase [Naegleria gruberi]
          Length = 687

 Score =  310 bits (795), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 222/629 (35%), Positives = 335/629 (53%), Gaps = 62/629 (9%)

Query: 5   RTHSCGDL-GVSDVGSFVRLSGWVHRVR--PHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           R   CG++ G   VG  V+L+GWV  +R       +F+ +RD  G+ QV+        E 
Sbjct: 76  RNQYCGEVVGDELVGKQVKLNGWVENIRIINQNECVFVTVRDVSGVVQVMLKK-KELIEY 134

Query: 62  AK--SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
            K   +++E V+ + G+V  R +E +N N+ TG  E+ A ++ +L+ A+ LPL +    E
Sbjct: 135 LKDNEIKNESVVFVSGVVSKRPSEMMNPNMKTGAYEIEATELLLLNKAKTLPLQLVNAEE 194

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178
               IR KYR+LDLRR  L +N+  R++ +   R      N F+E  TP L  S+PEGAR
Sbjct: 195 ---EIRLKYRYLDLRRRQLVENLSIRSKALAITRKYFGEMNRFLEIETPTLFKSTPEGAR 251

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVP+R  +G FYAL Q+PQQYKQLLM  G DRYFQIA C+RDE  R DR P EF Q+D
Sbjct: 252 EFLVPTR-QKGKFYALTQSPQQYKQLLMVGGMDRYFQIARCYRDESGRMDRQP-EFTQID 309

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-NPI 297
           +EMSF+ Q DI   +EN ++ ++++   G  +   F ++ Y DA+  YG+DKPDLR   +
Sbjct: 310 LEMSFLTQKDIYALIENFIKMLWKDIL-GIDIKTPFQQMKYRDAMDMYGSDKPDLRYEDL 368

Query: 298 IMHNVTEHFVH--SEFRVFSKILSVNPGYEVWAIPAK--GGGGNRAFCDRMNEWARSQGQ 353
              NVTE F +  S+  + ++ ++ + G+ V+A+ AK  G    R   D+  E A+S  +
Sbjct: 369 KFKNVTEIFKNEKSQIEIVNQTVA-DAGF-VYALKAKQIGATMTRKIIDQFTEKAKSVEK 426

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE----AIRVRLDMQDGDSCFF-IAGDPLK 408
                   RL  S  +    P    LN   TE     +R +LD+++GD     +  +   
Sbjct: 427 T-------RLIISTKIG--KPEEPFLNGKLTEQQQAKLREQLDLKEGDMLILSVDKEWET 477

Query: 409 FCSFAADARNHIAQ---ELGIINCNCFE----FCWIMDFPFYEWNEEE---------KKI 452
                   R   A+   E GI   N  E    F W++DF  +E  +++         + +
Sbjct: 478 TVKGLGRVREQCAKYMTEQGIYQFNTIEEKYRFLWVIDFQLFERAKDQHGQAHLHTSRGL 537

Query: 453 DFAHNPFTMPQGG----MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH---MSEVML 505
              H+PFT P       + S   ND+L ++   YD V NG E+  G IR H   M + +L
Sbjct: 538 SAMHHPFTAPHAEDIPLLYSDDVNDILKVRGQHYDCVLNGVELGGGSIRIHQADMQKYVL 597

Query: 506 QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG---AKNVREVSLF 562
           +    +G  + +V  RFG L  A   G PPHGG+A G DR++ LL G   AK +R+V  F
Sbjct: 598 EKVLELGEERTMV--RFGHLIEALSYGAPPHGGLALGFDRLICLLCGEDKAKTLRDVIAF 655

Query: 563 PMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           P S +  +++  +P  V  +QL+EL +++
Sbjct: 656 PKSSSGNEIMTQAPGEVEEDQLKELFIKV 684


>gi|227503533|ref|ZP_03933582.1| aspartyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227075569|gb|EEI13532.1| aspartyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 454

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 179/449 (39%), Positives = 248/449 (55%), Gaps = 25/449 (5%)

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
           +F E  TP LT S+PEGARDFLVP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C
Sbjct: 6   DFAEIETPTLTRSTPEGARDFLVPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQIARC 65

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           +RDED R+DR P EF QLD+EMSFV+QDD++   E +++ +++    G  +     R+ Y
Sbjct: 66  YRDEDFRADRQP-EFTQLDVEMSFVDQDDVIALGEEIVKELWKLI--GYDIQTPIPRMTY 122

Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-R 338
            DA++ YG+DKPDLR  I +   TE F  + FRVF           V A+   GG    R
Sbjct: 123 ADAMKYYGSDKPDLRFDIKIVECTEFFKDTTFRVFQNEY-------VGAVVMDGGASQPR 175

Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398
              D   +WA+ +G  GLAYI   + E G +   GPVAK++     E I   +  + GD+
Sbjct: 176 RQFDAWQDWAKQRGAKGLAYI--TVAEDGTLG--GPVAKNITDAEREGIAEHVGAKPGDA 231

Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE---------- 448
            FF AGD     +    AR  IA++L +I    + F W++D P +E + +          
Sbjct: 232 IFFAAGDTKSSRALLGAARGEIAKKLDLIKEGDWAFTWVVDAPLFEPSADATASGDVALG 291

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
             K    H+ FT P+         +     A+ YD+VCNG EI  G IR H  +V  + F
Sbjct: 292 HSKWTAVHHAFTSPKPEWIDSFDENPGEATAYAYDIVCNGNEIGGGSIRIHQEDVQKRVF 351

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             +GI  E  + +FG L  AF  G PPHGGIA G DRIV LL G  ++R+V  FP S   
Sbjct: 352 EVMGIGDEEAQEKFGFLLDAFSYGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGG 411

Query: 569 CDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            D L  +P+ +   Q +E G+      K+
Sbjct: 412 VDPLTDAPAPIPAAQRKETGVDFKPEKKR 440


>gi|32490862|ref|NP_871116.1| hypothetical protein WGLp113 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166068|dbj|BAC24259.1| aspS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 560

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 202/598 (33%), Positives = 314/598 (52%), Gaps = 64/598 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R   C  +  S VG  V L GWV  +R  G ++F+D RDH GI Q+       CFE    
Sbjct: 2   RNIYCYQINKSHVGKIVTLCGWVENIRDCGKLLFIDFRDHTGIIQI-------CFECFDK 54

Query: 62  ------AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                 +K +++E  + I G+V  +  ++++      ++E+ A  + I+++++  PLP+ 
Sbjct: 55  NIHINESKKLKNESCVQITGIVKIKKIKSLSKE--PQEVEVKATNLNIINISD--PLPID 110

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
              +  E    K+R+L +RR  L K +  R++I N +R  M    FI+  TPIL+ S+ E
Sbjct: 111 FNYKNSEEKYLKFRYLYIRRSKLFKILKLRSKITNYIRKVMEKRKFIDIETPILSHSTTE 170

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARD+LV SR++ G FY+LPQ+PQ +KQ+LM SG D+Y+QIA CFRDED RSDR P EF 
Sbjct: 171 GARDYLVHSRIHPGMFYSLPQSPQLFKQILMISGIDKYYQIAKCFRDEDLRSDRQP-EFT 229

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           Q+D E+SF   + + + +E +++ ++ +F N     NNF  I Y+D+I R+G+DKPDLRN
Sbjct: 230 QVDCEISFDNGEKVRDLIEILIKKLWIKFFNFEL--NNFPIITYNDSIIRFGSDKPDLRN 287

Query: 296 PIIMHNVTEHF--------VHSEFRVFSKILSVN--------PGYEVWAIPAKGGGGNRA 339
            + + NVT  F          S++++ + IL +           Y  +           A
Sbjct: 288 SLELINVTNLFKINERNKIALSKYKILAIILPLKVKLNFDKLKKYTNYLKYYIKKDVFLA 347

Query: 340 FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC 399
           + + +N++  S  +  +       ++S  V  +  + K+ N       ++ L     D  
Sbjct: 348 YVEDINKYEFSFFEEIIC------NDSNIVDNLLNLIKNKN-------KIILIASRKDCV 394

Query: 400 FFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF 459
           + IAG            R  I  E  I +   ++  WI++FP ++   +EKK+   H+PF
Sbjct: 395 YEIAG----------KLRIKIGLEFNITDIESWKPVWIVNFPLFK--TKEKKLVSVHHPF 442

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
           T P+   +S    + LS  +  YDLV NG EI SG  R H  E+    F  +GI++E   
Sbjct: 443 TSPKNFNKSKIFKNPLSFVSNSYDLVINGVEIGSGSSRIHKYEIQKIIFDVLGIAEETQN 502

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
             FG    A + G PPH G A G+DRIVML+    N+R V  FP + +  DL+ GSPS
Sbjct: 503 KNFGFFLNALKYGAPPHAGFAFGLDRIVMLISKTNNIRNVIAFPKTTSAYDLMTGSPS 560


>gi|40789249|ref|NP_060592.2| aspartyl-tRNA synthetase, mitochondrial precursor [Homo sapiens]
 gi|74758347|sp|Q6PI48|SYDM_HUMAN RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; Flags:
           Precursor
 gi|34783643|gb|AAH45173.1| DARS2 protein [Homo sapiens]
 gi|56203852|emb|CAI20380.1| aspartyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|119611367|gb|EAW90961.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b [Homo
           sapiens]
 gi|119611368|gb|EAW90962.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b [Homo
           sapiens]
          Length = 645

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 203/601 (33%), Positives = 319/601 (53%), Gaps = 31/601 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKNFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I + +E +L+  +   ++ + V   F  + + + +  YGTDKPD R  + 
Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFGMK 340

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           + ++++ F ++E       LS   G  +   IP       R   + +  +A       + 
Sbjct: 341 IIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEIL 400

Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +F   + + N     PVA   +     E IR+ ++ Q+ D     AG+  K CS     
Sbjct: 401 PVFLNANRNWN----SPVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKL 455

Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470
           R   A  L   G++  +   F F W++DFP +   EE  ++++ AH+PFT P      L 
Sbjct: 456 RLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLL 515

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             +    ++  YDLV NG EI  G IR H +E  LQ +    + KE V+     L +A  
Sbjct: 516 YTEPKKARSQHYDLVLNGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALD 572

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR++ L+ G+ ++R+V  FP S    DL+  +P +V  E+L+   +R
Sbjct: 573 YGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIR 632

Query: 591 I 591
           +
Sbjct: 633 V 633


>gi|241845294|ref|XP_002415522.1| aspartyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215509734|gb|EEC19187.1| aspartyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 632

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 208/603 (34%), Positives = 316/603 (52%), Gaps = 28/603 (4%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFE 60
           + +RTH+CG+L     G  V L GW+   R      FL +RD YGITQVV   D  A   
Sbjct: 47  YTWRTHTCGELRPVHRGKQVTLCGWILFKRMDK---FLIVRDAYGITQVVIPDDEKAAST 103

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGERE 119
           + +S+  E V+ I G V+ R     N N+ TG+IE+  ++++ L+ A+ +LP  V   ++
Sbjct: 104 LLESLPLESVVQITGEVVERPQGQWNENLPTGKIEVLCKELKALNNAKVDLPFHVREYQK 163

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGAR 178
             E++R +YR+LDLR   + +N+  R+ +   MR  ++    F+E  TP L   +P GA+
Sbjct: 164 KKEALRMRYRYLDLRSSEMQRNLRFRSDLQMRMRNFLVQSCGFVEIETPTLFKRTPGGAQ 223

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +++VP+R   G FY+L Q+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 224 EYVVPTRF-PGQFYSLVQSPQQFKQLLMVGGIDRYFQMARCYRDEGARPDRQP-EFTQVD 281

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSF   +DI+   E +L   + E  +   ++  F  + Y DAIR+YGTDKPDLR  + 
Sbjct: 282 IEMSFATANDIMEVTEELLVKSWPE--DMTPITEPFPIMTYRDAIRQYGTDKPDLRFGMQ 339

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQ-GQPG 355
           + +VT+     E  + SK  S   G  V  I   GG     R   +   + A+      G
Sbjct: 340 LVDVTQVMKDCELNIISKATSAE-GSSVQTIVVPGGARVWKRVHAEAFKDIAKHHFNLQG 398

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +  I  ++ E   V     + KHL    T  +  RLD + GD     AG+  K C     
Sbjct: 399 IVDI--QVCEDSTVK--SSIKKHLTPELTGKLLQRLDAKPGDLILMCAGNTEKVCLLLGK 454

Query: 416 ARNH---IAQELGI--INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
            R     I  E GI       F+F W++DFP ++  EE+  +   H+PFT P      L 
Sbjct: 455 LRLEALKILSEAGIHLFEPGTFKFLWVVDFPLFKL-EEDGGLKANHHPFTAPHLDDLHLI 513

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D L  +   YDLV NG+E+A G +R H + +  Q    +  +++  + +   L  A +
Sbjct: 514 HTDPLKARGQHYDLVLNGWEVAGGSVRIHNAHLQRQVLREILKARD--DTQLSHLLEALE 571

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G  ++V +L  + ++R+V  FP S    DL+   P+ ++  ++    +R
Sbjct: 572 SGAPPHGGIALG--KLVCILCNSPSIRDVIAFPKSVEGKDLMCNVPARITQAEMDLYHIR 629

Query: 591 IVE 593
            V+
Sbjct: 630 TVD 632


>gi|158255182|dbj|BAF83562.1| unnamed protein product [Homo sapiens]
          Length = 645

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 203/601 (33%), Positives = 319/601 (53%), Gaps = 31/601 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQCRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKNFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I + +E +L+  +   ++ + V   F  + + + +  YGTDKPD R  + 
Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFEMK 340

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           + ++++ F ++E       LS   G  +   IP       R   + +  +A       + 
Sbjct: 341 IIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEIL 400

Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +F   + + N     PVA   +     E IR+ ++ Q+ D     AG+  K CS     
Sbjct: 401 PVFLNANRNWN----SPVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKL 455

Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470
           R   A  L   G++  +   F F W++DFP +   EE  ++++ AH+PFT P      L 
Sbjct: 456 RLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLL 515

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             +    ++  YDLV NG EI  G IR H +E  LQ +    + KE V+     L +A  
Sbjct: 516 YTEPKKARSQHYDLVLNGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALD 572

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR++ L+ G+ ++R+V  FP S    DL+  +P +V  E+L+   +R
Sbjct: 573 YGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIR 632

Query: 591 I 591
           +
Sbjct: 633 V 633


>gi|149636279|ref|XP_001515219.1| PREDICTED: similar to DARS2 protein [Ornithorhynchus anatinus]
          Length = 880

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 198/600 (33%), Positives = 316/600 (52%), Gaps = 29/600 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++CG+L  S +G  V L GW+   R     +FL +RD +G+ QVV   D +   + K+
Sbjct: 286 RTNTCGELCSSHLGQEVTLCGWIQYRR---QSLFLVLRDFHGLIQVVIPQDESAASVKKA 342

Query: 65  V---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +     E V+ + G V+SR     N  + TG+IE+  +  EIL+  ++LP  +    +  
Sbjct: 343 LCEAPMESVVQVTGTVISRPPGQENPKMPTGEIEIKVKSAEILNSCKKLPFEIKDFLKKT 402

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 403 EALRMQYRYLDLRSFQMQHNLRLRSQMVMKMREFLCNL--HGFVDVETPTLFKKTPGGAK 460

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +F+VPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A CFRDE  + DR P EF Q+D
Sbjct: 461 EFVVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCFRDEGSKPDRQP-EFTQID 518

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I   +E +L+  F        ++  F  + Y +A+  YG DKPD R  + 
Sbjct: 519 IEMSFVDQAGIQKLIEGLLQ--FSWPKEKGHITTPFPSMSYSEALTSYGLDKPDTRFGMK 576

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           + +V++    +E     K LS   G  +   +P       R   + + E+A +     ++
Sbjct: 577 ILDVSDILKTTEIEFVQKALSEPQGAIKAICVPEGTKHLKRKDIESLKEFAETHFNQEIS 636

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
            ++ R     N     P  K L+          +++Q+ D     AG+    CS     R
Sbjct: 637 PLYLR----SNRNWKSPFTKALSEEQKLEFIKLMEIQEEDLVLLTAGEHTNSCSLLGKLR 692

Query: 418 NHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKG 471
              A+ L   G++  + + F F W++DFP +   EE  ++++ AH+PFT P      L  
Sbjct: 693 LQCAELLESRGLMLRDPSAFHFLWVVDFPLFLPKEENPEELESAHHPFTAPHPDDTHLLF 752

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ++   +++  YDLV NG E+  G IR H +E   Q +    + KE V+     L  A   
Sbjct: 753 SEPRKVRSQHYDLVLNGSEVGGGSIRIHSAEQ--QHYILETVLKEDVK-LLSHLLEALSF 809

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR++ L+ GA ++R+V  FP S    DL+  +P  +  E+L+   +++
Sbjct: 810 GAPPHGGIALGLDRLICLITGAPSIRDVIAFPKSVRGHDLMSNAPDYLPPEELKPYHIQV 869


>gi|126306429|ref|XP_001373324.1| PREDICTED: similar to DARS2 protein [Monodelphis domestica]
          Length = 808

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 199/594 (33%), Positives = 317/594 (53%), Gaps = 31/594 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R     +FL +RD +G+ QVV   D +   + K 
Sbjct: 166 RTNTCGELRSSHLGQEVTLCGWIQYRRQS---LFLILRDFHGLIQVVIPQDESAASVKKL 222

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 223 LCEAPIESVVQLTGTVISRPPGQENPKMPTGEIEIKVKTAELLNSCKKLPFEIKDFMKKT 282

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R K+R+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 283 EALRMKFRYLDLRSSQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKKTPGGAK 340

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +F+VPSR   G FY+LPQ+PQQ+KQLLM  GFDRYFQ+A C+RDE  + +R P EF Q+D
Sbjct: 341 EFVVPSR-EPGKFYSLPQSPQQFKQLLMVGGFDRYFQVARCYRDEGSKPERQP-EFTQVD 398

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I   +E +L+  + +  N  T+   F  + Y +A+  YGTDKPD R  + 
Sbjct: 399 IEMSFVDQAGIQKLIEGLLQYSWPKDKNPLTIP--FPSMTYTEALDFYGTDKPDTRFGMK 456

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD--RMNEWARSQGQPGL 356
           + +V++ F ++E      +L   P   +  I   GG       D   + E+A +     +
Sbjct: 457 IVDVSDIFRNTEIEFLRDMLK-KPQGAIKTICIPGGAKYLKSKDFEAIKEFAVNHFNQEV 515

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           + +F +   S       P+ K L      A+   L +Q+ D     AG+  K CS     
Sbjct: 516 SPLFLKTSGSRK----SPLTKLLKEEEKSALISLLRVQEEDVVLLTAGEHNKACSVLGKL 571

Query: 417 RNHIA---QELGII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470
           R   A   ++ G++  +   F F W+++FP +   EE+ ++++ AH+PFT P      L 
Sbjct: 572 RLECADLLEDRGVVLRDPAAFHFLWVVEFPLFLPKEEDPRELESAHHPFTAPHPSDVHLL 631

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             +   +++  YDLV NG E+  G IR H +E   Q +    + KE V+     L +A  
Sbjct: 632 YTEPEKVRSLHYDLVLNGSEVGGGSIRIHKAEQ--QQYVLETVLKEDVK-LLSHLLQALD 688

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
            G PPHGGIA G+DR+V L+ G+ ++R+V  FP +    DL+  +P  V+ E +
Sbjct: 689 FGAPPHGGIALGLDRLVCLITGSPSIRDVIAFPKTFRGHDLMSNAPDYVTPEDI 742


>gi|327270229|ref|XP_003219892.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Anolis
           carolinensis]
          Length = 635

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 202/600 (33%), Positives = 307/600 (51%), Gaps = 29/600 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT +CG+L    +G  V L GW+   R  G  + L  RD  G+TQ+V   D+A   + K+
Sbjct: 43  RTKTCGELRSVHIGQEVTLCGWIQYQR-QGQFVIL--RDFQGLTQIVIPQDAAASHVKKT 99

Query: 65  ---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
              V  E V+ + G V+SR     N N+ TG IE+  +  E+L+  ++LP  +    +  
Sbjct: 100 LCDVPVESVVKVTGTVVSRPPGQTNPNMPTGDIEVKVETAEVLNSCKKLPFEMKDFTKKN 159

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LD+R   +  N+  R++++  MR   C      F++  TP L   +P GA+
Sbjct: 160 EALRMQYRYLDMRSAQMQYNLRLRSQMVMKMREYLCNYYG--FVDVETPTLFKKTPGGAK 217

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +F+VPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  + DR P EF Q+D
Sbjct: 218 EFVVPSR-EAGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSKPDRQP-EFTQVD 275

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I   +E +L+  +        ++  F  I Y++A+  YGTDKPD R  + 
Sbjct: 276 IEMSFVDQPGIQALIEGLLQ--YSWPLEKGPINTPFPSISYNEALSVYGTDKPDTRFAMK 333

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGY-EVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           + +V++   + +       LS   G      IP      +     R+NE  + Q    L 
Sbjct: 334 ITDVSDVLRNVQMEFLENHLSEPHGTIRAICIPQGAKYLHDKDLSRLNEMTKFQFNQVLL 393

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
            +  R D    V     +AK LN      +   +     D     AG+  K C      R
Sbjct: 394 PLILRPD----VRLKSRLAKFLNESKKLELLKAVQANVDDVVVLAAGEQEKVCLTLGKVR 449

Query: 418 NHIAQ-----ELGIINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKG 471
              A+      L +   + F F W++DFP +   EE   +++ AH+PFT P    E L  
Sbjct: 450 LEAAELLEARGLPLRKPSAFHFLWVVDFPLFLQKEESPSELESAHHPFTAPHPSDEHLLY 509

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            +   ++   YDLV NG EI  G IR H ++   Q F    + KE  +     L  A   
Sbjct: 510 TEPSKVRGQHYDLVLNGSEIGGGSIRIHNAKQ--QCFVLENVLKEDTKP-LAHLLEALDS 566

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR++ L++GA+++R+V  FP S    DL+  +P  VS E+L+   +++
Sbjct: 567 GAPPHGGIALGLDRLICLIVGAESIRDVIAFPKSFKGRDLMSNAPDDVSPEELKPYHIQV 626


>gi|193216721|ref|YP_001999963.1| aspartyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193002044|gb|ACF07259.1| aspartyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 557

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 197/603 (32%), Positives = 304/603 (50%), Gaps = 74/603 (12%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G L + D G  V L GW+   R     +F+D RD  G+ Q+V +  S        +  E 
Sbjct: 7   GKLRLGDEGKAVTLYGWIANKRKFKNQLFIDFRDSSGLVQLVFHDVSDPL-----LTKES 61

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L I G V  R     N  I +G++E+  ++ EIL+ ++++P  V       E +R +YR
Sbjct: 62  CLKITGEVKKRLE--ANLEIPSGEVEVHVKEYEILNSSKQIPFEVNKTNSANEDLRLEYR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           FLDLR++ +  N+  R +++  +R      NFIE  TPIL  S+PEGARD+LVP+R  +G
Sbjct: 120 FLDLRQEKMLANLKLRHKLLLEIRNYFDKSNFIEVETPILCKSTPEGARDYLVPTR-RKG 178

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            F+ALPQ+PQ YKQLLMASG +RYFQIA  FRDED R DR P EF QLD+EMSF   +++
Sbjct: 179 KFFALPQSPQLYKQLLMASGVERYFQIARVFRDEDLRKDRQP-EFTQLDIEMSFGGMEEL 237

Query: 250 LNTMENVLRGVFEEFSN-GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF-- 306
            +  E++ +   E   N G  +   F  + Y  ++  YG DKPD R   +++++ +    
Sbjct: 238 FSICEDMWK---ETLGNLGYKIKTPFKHMDYFYSMAHYGNDKPDTRYEFLINDLGDSLGA 294

Query: 307 ----------------VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
                           +     +  +I   N G ++  I            D + E A+S
Sbjct: 295 FYPKNTFIKAIFFDRNIDDNLSLVKEIFQKNQGEQLEVINLNANKSQDKKLDIIKEMAKS 354

Query: 351 QGQPGLAYIFWR-LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
           QG      I    + E   +  +G            A+RV L+                 
Sbjct: 355 QGIANPTIIISSGVKEENALKALG------------AVRVTLN----------------- 385

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMES 468
                       +   + N +   F WI+++P +E++EE +    AH+ FT   +  ++ 
Sbjct: 386 ------------ELYRLANEDELNFLWIVNWPMFEFDEESQTWAPAHHAFTQFDESTVKY 433

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           L+  +   ++A  YDLV NGFE+ SG IR H  EV  + F+ + +S +  +N+FG   +A
Sbjct: 434 LETKEYSKVRAKSYDLVLNGFELGSGSIRIHDPEVQKKMFNVLNLSPKEQQNKFGFFLKA 493

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           F  G+PPH G+A GI+R++M+L  + ++R+V  FP +    DLL  SPS V   QL+E G
Sbjct: 494 FDYGLPPHNGVAFGIERVLMILTKSASIRDVIAFPKNAKGLDLLSASPSEVLDSQLKEYG 553

Query: 589 LRI 591
           L++
Sbjct: 554 LKL 556


>gi|114565510|ref|XP_001150205.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 6
           [Pan troglodytes]
          Length = 624

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 205/600 (34%), Positives = 320/600 (53%), Gaps = 50/600 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  + 
Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMK 340

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + ++++ F ++E       LS            K  G  +A C  + E A       +  
Sbjct: 341 IIDISDVFRNTEIGFLQDALS------------KPHGTVKAIC--IPEGAE------ILP 380

Query: 359 IFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +F   + + N     PVA   +     E IR+ ++ Q+ D     AG+  K CS     R
Sbjct: 381 VFLNANRNWN----SPVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKLR 435

Query: 418 NHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKG 471
              A  L   G++  +   F F W++DFP +   EE  ++++ AH+PFT P      L  
Sbjct: 436 LECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLY 495

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            +    ++  YDLV NG EI  G IR H +E  LQ +    + KE V+     L +A   
Sbjct: 496 TEPKKARSQHYDLVLNGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALDY 552

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR++ L+ G++++R+V  FP S    DL+  +P +V  E+L+   +R+
Sbjct: 553 GAPPHGGIALGLDRLICLVTGSRSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRV 612


>gi|326924806|ref|XP_003208616.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Meleagris
           gallopavo]
          Length = 618

 Score =  306 bits (784), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 202/591 (34%), Positives = 314/591 (53%), Gaps = 25/591 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  + +G  V L GW+   R  G  +FL +RD  G+TQ++   D A   + K 
Sbjct: 23  RTNTCGELRAAHIGQKVTLCGWIQYQR-QG--LFLVLRDFQGLTQIIIPQDEAHSHVRKL 79

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             +   E V+ + G+V SR     N  + TG IE+  +  E+L+  ++LP  +    +  
Sbjct: 80  LCNAPVESVVRVTGIVSSRPPGQENLKMPTGDIEVKVESAEVLNFCKKLPFEIKDFIKKS 139

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   L  N+  R++++  MR  +   + F++  TP L   +P GA++F
Sbjct: 140 EALRMQYRYLDLRSSQLQYNLRLRSQVVMRMREYLCNHHGFVDVETPTLFKRTPGGAKEF 199

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 200 LVPSR-EPGKFYSLPQSPQQFKQLLMIGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 257

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I   +E +L+  + E      ++  F  + Y++A+  YGTDKPD R  + + 
Sbjct: 258 MSFVDQAGIQRLIEGLLQYSWPE--ERGPITTPFPSMTYEEALADYGTDKPDTRFGMKIV 315

Query: 301 NVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++     +      +LS  +   +   IP           + + E A+SQ    +  +
Sbjct: 316 DISDTLRRVDIGFVQNVLSYPHSTAKAICIPQGVRYLKNKDLESLKEAAKSQFNQEIMDV 375

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R D  G++  +  + K L+      +   L+MQ  D     AGD  + CS     R  
Sbjct: 376 ICRPD--GSLKSL--LTKFLSEEQQSELIQALNMQVDDVVLLAAGDHERVCSALGSLRLE 431

Query: 420 IAQEL---GII--NCNCFEFCWIMDFP-FYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            A  L   G++  +     F W++DFP F    E   +++ AH+PFT P     +L  +D
Sbjct: 432 SADLLEAAGMVLRDPAALHFLWVVDFPLFLPKKENPSELESAHHPFTAPHPLDTNLLYSD 491

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +++  YDLV NG EI  G IR H +E   Q F    + KE  E     L  A + G 
Sbjct: 492 PTKVRSQHYDLVLNGSEIGGGSIRIHNAEQ--QRFVLEKVLKEDSEV-LSHLLEALEFGA 548

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           PPHGGIA G+DR++ L++G+ ++R+V  FP S    DL+  +P  V+ E+L
Sbjct: 549 PPHGGIALGLDRLISLIVGSPSIRDVIAFPKSFRGRDLMGNAPDYVTPEEL 599


>gi|291240797|ref|XP_002740304.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 700

 Score =  306 bits (783), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 208/658 (31%), Positives = 322/658 (48%), Gaps = 85/658 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-IAK 63
           R+H+CG+L  S +G  V L GWV   R       L ++D YGITQ+VA     C   +  
Sbjct: 52  RSHTCGELRASHIGEPVTLYGWVQYKR---FDFMLTLKDAYGITQIVAANTQNCISSVLS 108

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122
            +RSE V+ I G V  R  E IN  ++TG+IE+ A+ IE++S   ++LP       +  E
Sbjct: 109 KIRSESVIKITGKVQPRQNEQINKEMLTGEIEVLAEDIELISECKDKLPFQPKDHAKVKE 168

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181
           S+R +YR+LD+R   + +N+  R+RI   MR  +   + F+E  TP +   +P G+++F+
Sbjct: 169 SLRMQYRYLDIRTSKMQENLRLRSRIAMKMREFLCNHHGFVEVETPTMFKQTPGGSQEFV 228

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED----------------- 224
           +P+R +   FY LPQ+PQQ+KQLLM  G DRYFQ A C+RDE                  
Sbjct: 229 IPTR-HPERFYCLPQSPQQFKQLLMVGGLDRYFQFARCYRDEGTKPDRQPEFTQVSRNLV 287

Query: 225 ---------------------PRSDRLP------------------GEFYQLDMEMSFVE 245
                                 R DR P                   EF Q+D+EMSFV 
Sbjct: 288 HIARPDRQPEFTQVSPNLVHIARPDRQPEFTQVSSNLVHIARPDRQAEFTQVDLEMSFVN 347

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           +++I + +E ++   +   SN   ++  F ++ Y DAI +YGTDKPD R  + +H+V++ 
Sbjct: 348 RENIYSLVEGMIE--YSWPSNKTNLTLPFPKMTYADAIAKYGTDKPDTRFDMKLHDVSDI 405

Query: 306 FVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           F++S   +F   L    G  +  AI       NR   + + + A+++ + G+ +I  + D
Sbjct: 406 FINSGLSIFDDALKSTEGTVQAIAIRPHTHITNRDL-ENLQKLAKTRSEHGVIFIQVK-D 463

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E+       P++K+L       +   L M+ GD     AG  L  C      R  +A  L
Sbjct: 464 ET---TWRSPISKYLKDDMKNRLGDLLHMKPGDVILLAAGKYLSTCLLLGHMRIAVADLL 520

Query: 425 GIINCNCFE-----FCWIMDFPFYEWNEEEK------KIDFAHNPFTMPQGGMESLKGND 473
                N  +     F W+ DFP +   E  K      +++ AH+PFT P           
Sbjct: 521 ETKGVNVRKTRSNAFVWVEDFPLFLPKENGKCESQTVELESAHHPFTAPHPEDAEFIYTK 580

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +++  YDLV NG EIA G IR H  +  LQ +    I KE   + +  L  A + G 
Sbjct: 581 PDKVRSLHYDLVYNGAEIAGGSIRIH--DAKLQKYVLDEILKEDSSSLYH-LLEALESGA 637

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           P HGGIA G DR + +L G +++R+V  FP S    DL+ G+P+ ++ E +++  + I
Sbjct: 638 PTHGGIAIGFDRYISMLRGTQSIRDVIAFPKSWEGNDLMSGAPTKLTNEDIKDYHIEI 695


>gi|24584738|ref|NP_724018.1| CG31739 [Drosophila melanogaster]
 gi|21430724|gb|AAM51040.1| SD02215p [Drosophila melanogaster]
 gi|22946677|gb|AAF53577.3| CG31739 [Drosophila melanogaster]
          Length = 1082

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 209/609 (34%), Positives = 323/609 (53%), Gaps = 47/609 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62
           RTH+CG+L  +D+   V + GW+   R +    F  +RD YG TQV+ +P +   E    
Sbjct: 405 RTHNCGELTSNDINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLSPKTYGLEEYAE 461

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121
             V  E ++ ++G V+ R A TIN  + TG +E+ A K+ +L+ A++ LP  +       
Sbjct: 462 TGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRKFNRAG 521

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
           E +R  +R+LDLR + +  N+  R+ +I  MR  +I    F+E  TP L   +P GA++F
Sbjct: 522 ERLRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 581

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 582 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 639

Query: 241 MSFVEQDDILNTMENVLRGVF-EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           +SF  +DDI+  +E  LR  + ++F    T    F RI Y++A+ +YG DKPD R   ++
Sbjct: 640 LSFTSRDDIMQLIEETLRYSWPKDFPRLQTP---FRRITYEEAMEKYGNDKPDTRFGFLL 696

Query: 300 HNVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +NV+E    S EF+     L       V A  A   G  R   +       S G+     
Sbjct: 697 NNVSEIIEKSDEFKEKYDDLGAY-AIVVRASEAFWNGAARKHYE-------SLGKEFKGT 748

Query: 359 IFWRLDESGNVAGMGP---VAKHLNIVNTEAIRV----RLDMQDGDSCFFIAGDPLK--- 408
           +F R          GP   V + L  +  E +      + D+++ D  F   G  ++   
Sbjct: 749 LFVR--------KFGPTKDVQEKLGKLLGEDVATEVADKFDLEENDLLFLGIGSKVETRE 800

Query: 409 -FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GM 466
                  D ++ + +   I   N F F W++DFP +E N E  +++  H+PFT+P    +
Sbjct: 801 LLGRIRLDYQDFLVENAKIKKPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDL 860

Query: 467 ESLKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
           E+   +  +L SI++  YDLV NG E+  G IR H  +  +Q F    I K +  +    
Sbjct: 861 ENFATSCENLESIRSQAYDLVLNGQEVGGGSIRIHDRD--MQHFILEQILK-IPHDHLSH 917

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  A + G PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E++
Sbjct: 918 LLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISDEEM 977

Query: 585 RELGLRIVE 593
           R   L +V+
Sbjct: 978 RLYHLSVVD 986



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 4/110 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 234 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLSDTFLS 289

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
              + V+ I G V+ R    +N    TG++E+S   +++L+  +    P+
Sbjct: 290 TPEQTVIQIVGKVLGRPKANVNLKYDTGEVEVSVTSVKVLNPDDPYDGPI 339



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAKSV 65
            SCG+L     G FV LSG + + R +    F ++RD  G   Q+V   D     +A+ +
Sbjct: 89  QSCGELRNHHCGLFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHP-RVARRM 144

Query: 66  RS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKI 101
            +      L I GLVM R   + N  + TG+IE+  Q I
Sbjct: 145 NNMPENTTLTIVGLVMRRPHNSCNQTMPTGEIEVEVQDI 183


>gi|198433016|ref|XP_002131496.1| PREDICTED: similar to aspartyl-tRNA synthetase 2, mitochondrial
           [Ciona intestinalis]
          Length = 638

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 199/602 (33%), Positives = 310/602 (51%), Gaps = 40/602 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR+H+CG+L + + G  V L GW+   R      FL +RD +G  Q++        +  +
Sbjct: 56  YRSHTCGELRIKNAGEAVSLCGWLEYKRKD----FLVLRDSFGSVQILITGYEDKNQTFQ 111

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +V+ E V+ + G V +R     N N+ITG+IE+    IEIL+  + LP  V       E 
Sbjct: 112 NVKPESVVKVTGKVTTRPEGQANPNMITGEIEIIPDNIEILNKCKFLPFRVQKFAGKGER 171

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR KYR+LD+R D L +N+  R+++++ MR  +    F+E  TP L   +P GAR+F+VP
Sbjct: 172 IRQKYRYLDIRGDILQQNLRLRSKVLSKMRKSLEENCFVEVETPTLFHPTPGGAREFIVP 231

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           S  N G FY+LPQ+PQQ KQLLM  G DRY+Q A C+RDE  + DR   EF QLD+EMSF
Sbjct: 232 SSSNPGKFYSLPQSPQQLKQLLMIGGVDRYYQFARCYRDEPFKRDR-QVEFTQLDIEMSF 290

Query: 244 VEQDDILNTMENVLRGVF-EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           V+ +D++   E V++  +  +FS+      +F  I YDDA+ +YG+DKPD R  +++H++
Sbjct: 291 VDVNDVIKLSEEVIKSSWPRKFSD-----ESFKLITYDDAMSKYGSDKPDTRFGMLLHDI 345

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T     +   +F    S +P   + A+  +     + F  +   +  S+           
Sbjct: 346 TTFIPDTLVELFQGDHS-DP-VNIQAVVVE--NAQKHFSSKFRRYIGSRMTSA------- 394

Query: 363 LDESGNVAGMGPV-------AKHLNI--VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
           +D+    A +G V        K+ NI  + T+ +   L +   D      G+        
Sbjct: 395 IDDPSPYALLGLVNGQWSGYHKNTNIGSMVTKQLVDHLQLGGSDIVVVSWGEKRSAQKTL 454

Query: 414 ADARNHIAQELGII-----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
              R  I++    I     N +  +F W++DFP +E +     +   H+PFT P      
Sbjct: 455 GALRRIISRIFDEISVKHRNVDLDQFLWVVDFPLFEADPYTGSLCTVHHPFTSPHPDDVH 514

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           L   D L +++  YDLV NG E+  G IR H S++  Q F+ + +           L  A
Sbjct: 515 LLEVDPLKVRSQAYDLVLNGNEVGGGSIRIHDSKLQRQIFTLLNLD----FTELSYLLEA 570

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
              G PPHGGIA GIDRI+ +L G + +R+V  FP +    DL+  SP +++   L+E  
Sbjct: 571 LNSGAPPHGGIAFGIDRIMSILCGTETIRDVIAFPKNSRGEDLMTNSPISINSNILKEFH 630

Query: 589 LR 590
           ++
Sbjct: 631 IK 632


>gi|27369928|ref|NP_766232.1| aspartyl-tRNA synthetase, mitochondrial precursor [Mus musculus]
 gi|81913222|sp|Q8BIP0|SYDM_MOUSE RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; Flags:
           Precursor
 gi|26332118|dbj|BAC29789.1| unnamed protein product [Mus musculus]
 gi|50370336|gb|AAH76606.1| Aspartyl-tRNA synthetase 2 (mitochondrial) [Mus musculus]
 gi|74218347|dbj|BAE23785.1| unnamed protein product [Mus musculus]
 gi|148707385|gb|EDL39332.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_d [Mus
           musculus]
          Length = 653

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 206/606 (33%), Positives = 319/606 (52%), Gaps = 39/606 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++CG+L  S +G  V L GW+   R +    FL +RD +G+ Q++   D    E A S
Sbjct: 49  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDCHGLVQILIPQD----ESAAS 101

Query: 65  VRS-------EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           VR        E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  +   
Sbjct: 102 VRRILCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDF 161

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSP 174
            +  E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P
Sbjct: 162 VKKTEALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTP 219

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            GA++FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF
Sbjct: 220 GGAKEFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EF 277

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            Q+D+EMSFVEQ  I   +E +L+  +    + + +   F  + + +A+  YGTDKPD R
Sbjct: 278 TQIDIEMSFVEQTGIQRLVEGLLQ--YSWPGDKDPLVTPFPSMTFAEALATYGTDKPDTR 335

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQG 352
             + + +V++ F ++E R     L+  P   V AI    G     +   + + ++A    
Sbjct: 336 FGMKIVDVSDVFRNTELRFLQDALA-KPQGTVKAICVHDGAKYLRKEDIEFIRKFAVHHF 394

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              +  IF  L+   N +   P AK +       +   +++Q+ D     AG+  K CS 
Sbjct: 395 SQEVLPIF--LNAKKNWS--SPFAKFIMEEERLELARSMEIQEEDIVLLTAGEHEKACSL 450

Query: 413 AADARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGM 466
               R   A  L      + +   F F W++DFP +   EE   +++ AH+PFT P    
Sbjct: 451 LGKLRLECADLLEMRGAVLRDPAVFSFLWVVDFPLFLAKEESPTELESAHHPFTAPNSSD 510

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
             L   +   ++   YDLV NG EI  G +R H  +  LQ +    + KE V+     L 
Sbjct: 511 IHLLYTEPEKVRGQHYDLVLNGNEIGGGSVRIH--DAQLQRYILETLLKEDVK-LLSHLL 567

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           +A   G PPHGGIA G+DR+V L+ GA ++R+V  FP S    DL+  +P +VS E+L+ 
Sbjct: 568 QALDYGAPPHGGIALGLDRLVCLVTGAPSIRDVIAFPKSYRGQDLMSNAPDSVSPEELKP 627

Query: 587 LGLRIV 592
             + ++
Sbjct: 628 YHIHVL 633


>gi|297281534|ref|XP_001101931.2| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Macaca mulatta]
          Length = 637

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 202/598 (33%), Positives = 317/598 (53%), Gaps = 33/598 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD +G+ QVV   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFHGLVQVVIPQDESAASVRKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFMKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R +YR+LDLR   +  N+  R++++  MR  +       C+        PEGA++FL
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYL-------CNLHASGQMLPEGAKEFL 219

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+EM
Sbjct: 220 VPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIEM 277

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  + + +
Sbjct: 278 SFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTVTFTEALATYGTDKPDTRFGMKIID 335

Query: 302 VTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +++ F ++E       LS   G  +   IP       R   + + ++A       +  +F
Sbjct: 336 ISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQEILPVF 395

Query: 361 WRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              + + N     PVA   +     E IR+ +D Q+ D     AG+  K CS     R  
Sbjct: 396 LNANRNWN----SPVASFIMESQRLELIRL-MDTQEEDVVLLTAGEHNKACSLLGKLRLE 450

Query: 420 IAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473
            A  L   G++  +   F F W++DFP +   EE  ++++ AH+PFT P      L   +
Sbjct: 451 CADLLETRGMVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTE 510

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
               ++  YDLV NG EI  G IR H +E  LQ +    + KE V+     L +A   G 
Sbjct: 511 PKKARSQHYDLVLNGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALDYGA 567

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGGIA G+DR++ L+ G+ ++R+V  FP S    DL+  +P ++  E+L+   +R+
Sbjct: 568 PPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNAPDSIPSEELKPYHIRV 625


>gi|281353847|gb|EFB29431.1| hypothetical protein PANDA_005157 [Ailuropoda melanoleuca]
          Length = 602

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 202/602 (33%), Positives = 324/602 (53%), Gaps = 33/602 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +   IFL +RD +G+ QVV   + +   + K 
Sbjct: 8   RTNTCGELRSSHLGQEVTLCGWIQYRRQN---IFLVLRDFHGLVQVVIPQEESAAAVRKI 64

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  V    +  
Sbjct: 65  LCEAPVESVVQVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNSCKKLPFEVKDFVKKT 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 125 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 182

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +F++PSR   G FY LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 183 EFVIPSR-EPGKFYCLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I   +E +L+  +   ++ + +   F  + + +A+  YGTDKPD R  + 
Sbjct: 241 IEMSFVDQTGIQRLIEGLLQ--YSWPNDKDPLVVPFPSLTFAEALASYGTDKPDTRFGMK 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356
           + ++++ F ++E       LS  P   + AI    G     R   + + ++A       +
Sbjct: 299 IIDISDVFRNTEVGFLQDALS-KPQGTIKAICISEGTKYLKRKDLESIRKFAADHFNQEV 357

Query: 357 AYIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
             +F +   + N     PVA+  L    +E IR+ +++++ D     AG+  K CS    
Sbjct: 358 LPVFPKASRNWN----SPVAQSILEEQGSELIRL-MEIREDDVVLLTAGEHKKACSVLGK 412

Query: 416 ARNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEEK-KIDFAHNPFTMPQGGMESL 469
            R   A  L   G++  +   F F W++DFP +   EE   +++ AH+PFT P      L
Sbjct: 413 LRLECADLLEARGLVLRDPALFSFLWVVDFPLFLPKEENPGELESAHHPFTAPHPSDIQL 472

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              +   +++  YDLV NG EI  G IR H +E  LQ +    + KE V+     L +A 
Sbjct: 473 LYTEPEKVRSLHYDLVLNGSEIGGGSIRIHDAE--LQRYILATLLKEDVK-LLSHLLQAL 529

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
             G PPHGGIA G+DR++ L+ GA ++R+V  FP S    DL+  +P ++  E+L+   +
Sbjct: 530 DFGAPPHGGIALGLDRLICLVTGAPSIRDVIAFPKSFRGHDLMSNAPDSLPPEELKPYHI 589

Query: 590 RI 591
           ++
Sbjct: 590 QV 591


>gi|58403364|gb|AAH89191.1| Aspartyl-tRNA synthetase 2 (mitochondrial) [Mus musculus]
          Length = 653

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 207/606 (34%), Positives = 318/606 (52%), Gaps = 39/606 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++CG+L  S +G  V L GWV   R +    FL +RD +G+ Q++   D    E A S
Sbjct: 49  RTNTCGELRSSHLGQEVTLCGWVQYRRQN---TFLVLRDCHGLVQILIPQD----ESAAS 101

Query: 65  VRS-------EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           VR        E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  +   
Sbjct: 102 VRGILCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDF 161

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSP 174
            +  E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P
Sbjct: 162 VKKTEALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTP 219

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            GA++FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF
Sbjct: 220 GGAKEFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EF 277

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            Q+D+EMSFVEQ  I   +E +L+  +    + + +   F  + + +A+  YGTDKPD R
Sbjct: 278 TQIDIEMSFVEQTGIQRLVEGLLQ--YSWPGDKDPLVTPFPSMTFAEALATYGTDKPDTR 335

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQG 352
             + + +V++ F ++E R     L+  P   V AI    G     +   + + ++A    
Sbjct: 336 FGMKIVDVSDVFRNTELRFLQDALA-KPQGTVKAICVHDGAKYLRKEDIEFIRKFAVHHF 394

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              +  IF  L+   N +   P AK +       +   +++Q+ D     AG+  K CS 
Sbjct: 395 SQEVLPIF--LNAKKNWS--SPFAKFIMEEERLELARSMEIQEEDIVLLTAGEHEKACSL 450

Query: 413 AADARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGM 466
               R   A  L      + +   F F W++DFP +   EE   +++ AH+PFT P    
Sbjct: 451 LGKLRLECADLLEMRGAVLRDPAVFSFLWVVDFPLFLAKEESPTELESAHHPFTAPNSSD 510

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
             L   +   ++   YDLV NG EI  G  R H  +  LQ +    + KE V+     L 
Sbjct: 511 IHLLYTEPEKVRGQHYDLVLNGNEIGGGSARIH--DAQLQRYILETLLKEDVK-LLSHLL 567

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           +A   G PPHGGIA G+DR+V L+ GA ++R+V  FP S    DL+  +P +VS E+L+ 
Sbjct: 568 QALDYGAPPHGGIALGLDRLVCLVTGAPSIRDVIAFPKSYRGQDLMSNAPDSVSPEELKP 627

Query: 587 LGLRIV 592
             + ++
Sbjct: 628 YHIHVL 633


>gi|301763160|ref|XP_002917005.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Ailuropoda
           melanoleuca]
          Length = 653

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 202/602 (33%), Positives = 324/602 (53%), Gaps = 33/602 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +   IFL +RD +G+ QVV   + +   + K 
Sbjct: 49  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---IFLVLRDFHGLVQVVIPQEESAAAVRKI 105

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  V    +  
Sbjct: 106 LCEAPVESVVQVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNSCKKLPFEVKDFVKKT 165

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 166 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 223

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +F++PSR   G FY LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 224 EFVIPSR-EPGKFYCLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 281

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I   +E +L+  +   ++ + +   F  + + +A+  YGTDKPD R  + 
Sbjct: 282 IEMSFVDQTGIQRLIEGLLQ--YSWPNDKDPLVVPFPSLTFAEALASYGTDKPDTRFGMK 339

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356
           + ++++ F ++E       LS  P   + AI    G     R   + + ++A       +
Sbjct: 340 IIDISDVFRNTEVGFLQDALS-KPQGTIKAICISEGTKYLKRKDLESIRKFAADHFNQEV 398

Query: 357 AYIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
             +F +   + N     PVA+  L    +E IR+ +++++ D     AG+  K CS    
Sbjct: 399 LPVFPKASRNWN----SPVAQSILEEQGSELIRL-MEIREDDVVLLTAGEHKKACSVLGK 453

Query: 416 ARNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEEK-KIDFAHNPFTMPQGGMESL 469
            R   A  L   G++  +   F F W++DFP +   EE   +++ AH+PFT P      L
Sbjct: 454 LRLECADLLEARGLVLRDPALFSFLWVVDFPLFLPKEENPGELESAHHPFTAPHPSDIQL 513

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              +   +++  YDLV NG EI  G IR H +E  LQ +    + KE V+     L +A 
Sbjct: 514 LYTEPEKVRSLHYDLVLNGSEIGGGSIRIHDAE--LQRYILATLLKEDVK-LLSHLLQAL 570

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
             G PPHGGIA G+DR++ L+ GA ++R+V  FP S    DL+  +P ++  E+L+   +
Sbjct: 571 DFGAPPHGGIALGLDRLICLVTGAPSIRDVIAFPKSFRGHDLMSNAPDSLPPEELKPYHI 630

Query: 590 RI 591
           ++
Sbjct: 631 QV 632


>gi|56416505|ref|YP_153579.1| asparaginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|56387737|gb|AAV86324.1| asparaginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 296

 Score =  303 bits (776), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 149/284 (52%), Positives = 199/284 (70%), Gaps = 3/284 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M+ YRTH C +LGV+ VG+ V LSGWV+R R HGG++F+D+RD YGITQ++ N   +   
Sbjct: 1   MNIYRTHVCNELGVAHVGNEVALSGWVYRKRDHGGLLFVDLRDFYGITQLIFNESENPEL 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F    ++  E V+ + G+V  RS + +NA+I TG++E+    + ++S A  LPL V    
Sbjct: 61  FNRMATIGLESVITVRGIVAERSEDNVNASIETGRVEVKVSTLTVVSEAAPLPLHVPTSF 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
            YPE IR ++RFLDLR D +  +I+ R+ +++ +R  M A  FIE  TPILT+SSPEGAR
Sbjct: 121 SYPEDIRLQHRFLDLRCDKVKNSILLRSMVVSELRRAMEALGFIEVHTPILTSSSPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D++VPSR + G FYALPQAPQ +KQLLM  GFD+YFQIAPCFRDED R+DR PGEFYQLD
Sbjct: 181 DYIVPSRTHAGKFYALPQAPQIFKQLLMVGGFDKYFQIAPCFRDEDSRADRSPGEFYQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN-TVSNNFLRICYDD 281
           MEMSFV Q+D+   +E VL G+F +F+  +  V   F RI Y D
Sbjct: 241 MEMSFVTQEDVFAAIEPVLYGLFAKFAGADKKVDRQFPRITYRD 284


>gi|194760025|ref|XP_001962242.1| GF15370 [Drosophila ananassae]
 gi|190615939|gb|EDV31463.1| GF15370 [Drosophila ananassae]
          Length = 1132

 Score =  303 bits (776), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 199/593 (33%), Positives = 315/593 (53%), Gaps = 31/593 (5%)

Query: 5    RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62
            RTH CG+L  S++   V + GW+   R +    F  +RD YG TQV+ +  +   E    
Sbjct: 471  RTHHCGELTSSEINDKVVICGWLEFQRMNK---FFILRDAYGQTQVLLSAKTKGLEDYAE 527

Query: 63   KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121
              V  E ++ ++G+V+ R A TIN  + TG +E+ A K+ IL+ A++ LP  +       
Sbjct: 528  TGVPIESIVRVEGIVIPRPAATINPKMQTGHVEVDADKVTILNPAKKNLPFEIRKFNRAG 587

Query: 122  ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
            E +R  +R+LDLR + +  N+  R+ +I  MR  +I    F+E  TP L   +P GA++F
Sbjct: 588  ERLRLTHRYLDLRFNDMQHNLRLRSTVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 647

Query: 181  LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 648  VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDVE 705

Query: 241  MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            +SF  +DDI+  +E VLR  +    +   +   F RI Y++A+ +YG DKPD R   +++
Sbjct: 706  LSFTNRDDIMQLIEEVLR--YSWPKDLPRLQTPFRRITYEEAMEKYGVDKPDTRFGFLLN 763

Query: 301  NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNEWARSQGQPGLAYI 359
            N+TE        +  K       +E     A    G  AF +    +   S G+     +
Sbjct: 764  NITE--------IIEKCDEYKTKFEDLGAYAIVVRGTEAFWNGSARKHYESLGKTFKGTL 815

Query: 360  FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA----D 415
            F R   S        + K L     + +  + D+++ D  F   G  ++  +       D
Sbjct: 816  FVRKIVSTKDV-QEKLGKFLGEDVAKEVTEKFDLEENDLLFLGIGPKVETRTLLGRIRLD 874

Query: 416  ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGN-- 472
             R+ + +       N F F WI+DFP +E N E K+++  H+PFT+P    +++   +  
Sbjct: 875  YRDFLLENGRAKRHNDFRFLWIIDFPLFERNPETKQLESVHHPFTLPHADDLDNFATSCE 934

Query: 473  DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++ +I++  YDLV NG E+  G IR H  +  +Q F    I K +  +    L  A + G
Sbjct: 935  NMENIRSQAYDLVLNGQEVGGGSIRIHDRD--MQHFILEQILK-IPHDHLSHLLSALESG 991

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E+++
Sbjct: 992  CPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISDEEMK 1044



 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 4/110 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 309 RDITCNDLRRDDVGKTVTLVGWIPSSKNNK---FLQLKDGYGQTQLMIE-DKSLMDTFMS 364

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
              + +L I G V+SR    +N    TG+IE+S   ++I++  +    P+
Sbjct: 365 TPEQTLLQITGKVLSRPKANVNLKYDTGEIEVSVTNVKIINPDDPYDGPI 414


>gi|194884465|ref|XP_001976268.1| GG22777 [Drosophila erecta]
 gi|190659455|gb|EDV56668.1| GG22777 [Drosophila erecta]
          Length = 1145

 Score =  303 bits (776), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 204/609 (33%), Positives = 318/609 (52%), Gaps = 47/609 (7%)

Query: 5    RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62
            RTH+CG+L  +D+   V + GW+   R +    F  +RD YG TQV+  P +   E    
Sbjct: 464  RTHNCGELTSNDINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLLPKTEGLEEYAE 520

Query: 63   KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121
              V  E ++ ++G V+ R A TIN  + TG +E+ A K+ +L+ A++ LP  +       
Sbjct: 521  TGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRKFNRAG 580

Query: 122  ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
            E +R  +R+LDLR + +  N+  R+ +I  MR  +I    F+E  TP L   +P GA++F
Sbjct: 581  ERLRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 640

Query: 181  LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 641  VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 698

Query: 241  MSFVEQDDILNTMENVLRGVF-EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            +SF  +DDI+  +E  LR  + ++F    T    F RI Y++A+ +YG DKPD R   ++
Sbjct: 699  LSFTSRDDIMQLIEETLRYSWPKDFPRLQTP---FRRITYEEAMEKYGNDKPDTRFGFLL 755

Query: 300  HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNEWARSQGQPGLAY 358
            +NV+E        +  K       YE     A     + AF +    +   S G+     
Sbjct: 756  NNVSE--------IIEKSDDFKEKYEDLGAYAIVVRASEAFWNGAARKHYESLGKEFKGT 807

Query: 359  IFWRLDESGNVAGMGP-------VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
            +F R          GP       + K L       I  + D+++ D  F   G  ++  +
Sbjct: 808  LFVR--------KFGPTQDVQEKLGKLLGEDVATEIADKFDLEENDLLFLGIGPKVETRA 859

Query: 412  FAA----DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GM 466
                   D    + +   +   N F F W++DFP +E N E  +++  H+PFT+P    +
Sbjct: 860  ILGRIRLDYHEFLVENAKVKKPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDL 919

Query: 467  ESLKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
            ++   +  +L +I++  YDLV NG E+  G IR H  +  +Q F    I K +  +    
Sbjct: 920  DNFATSCENLENIRSQAYDLVLNGQEVGGGSIRIHDRD--MQHFILEQILK-IPHDHLSH 976

Query: 525  LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
            L  A + G PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E++
Sbjct: 977  LLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISDEEM 1036

Query: 585  RELGLRIVE 593
            R   L +VE
Sbjct: 1037 RLYHLSVVE 1045



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 4/110 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GWV   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 293 RDLTCNDLRRDDVGKTVTLVGWVPSTKNNK---FLQLKDGYGQTQLMIE-DQSLSDTFLS 348

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
              + V+ I G V+ R    +N    TG++E+S   +++L+  +    PV
Sbjct: 349 TPEQTVIQIVGKVLGRPKANVNLKYDTGEVEVSVTSVKVLNPDDPYDGPV 398



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAKSV 65
            SCG+L     G FV LSG + + R +    F ++RD  G   Q+V   D     +A+ +
Sbjct: 148 QSCGELRNHHCGLFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHP-RVARRM 203

Query: 66  RS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKI 101
            +      L I GLVM R   + N  + TG+IE+  Q I
Sbjct: 204 NNMPENTTLTIVGLVMRRPHNSCNQTMPTGEIEVEVQDI 242


>gi|195344600|ref|XP_002038869.1| GM17213 [Drosophila sechellia]
 gi|194133999|gb|EDW55515.1| GM17213 [Drosophila sechellia]
          Length = 1088

 Score =  302 bits (773), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 209/598 (34%), Positives = 314/598 (52%), Gaps = 77/598 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62
           RTH+CG+L  +D+   V + GW+   R +    F  +RD YG TQV+ +P +   E    
Sbjct: 463 RTHNCGELTSNDINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLSPKTYGMEEYAE 519

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121
             V  E ++ ++G V+ R A TIN  + TG +E+ A K+ +L+ A++ LP  +       
Sbjct: 520 TGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRKFNRAG 579

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
           E +R  +R+LDLR + +  N+  R+ +I  MR  +I    F+E  TP L   +P GA++F
Sbjct: 580 ERLRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 639

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 640 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 697

Query: 241 MSFVEQDDILNTMENVLRGVF-EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           +SF  +DDI+  +E  LR  + ++F    T    F RI Y++A+ +YG DKPD R   ++
Sbjct: 698 LSFTSRDDIMQLIEETLRYSWPKDFPRLQTP---FRRITYEEAMEKYGNDKPDTRFGFLL 754

Query: 300 HNVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +NV+E    S EF+     L        +AI  +    + AF    N  AR         
Sbjct: 755 NNVSEIIEKSDEFKEKYDDLG------AYAIVVR---ASEAF---WNGAARKH------- 795

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
            +  L +S   A +G              R+RLD QD    F +    +K          
Sbjct: 796 -YESLGKSSRRALLG--------------RIRLDYQD----FLVENAKIK---------- 826

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGN--DLL 475
                      N F F W++DFP +E N E  +++  H+PFT+P    +E+   +  +L 
Sbjct: 827 ---------KPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDLENFATSCENLE 877

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           SI++  YDLV NG E+  G IR H  +  +Q F    I K +  +    L  A + G PP
Sbjct: 878 SIRSQAYDLVLNGQEVGGGSIRIHDRD--MQHFILEQILK-IPHDHLSHLLSALESGCPP 934

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           HGGIA G+DR + +L  A+++R+V  FP S N  D L  +P  +S E++R   L +VE
Sbjct: 935 HGGIALGLDRFIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISDEEMRLYHLSVVE 992



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 4/110 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 292 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLSDTFLS 347

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
              + V+ I G V+ R    +N    TG++E+S   +++L+  +    P+
Sbjct: 348 TPEQTVIQIVGKVLGRPKANVNLKYDTGEVEVSVTSVKVLNPDDPYDGPI 397



 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAKSV 65
            SCG+L     G FV LSG + + R +    F ++RD  G   Q+V   D     +A+ +
Sbjct: 147 QSCGELRNHHCGLFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHP-RVARRM 202

Query: 66  RS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKI 101
            +      L I GLVM R   + N  + TG+IE+  Q I
Sbjct: 203 NNMPENTTLTIVGLVMRRPHNSCNQTMPTGEIEVEVQDI 241


>gi|242007519|ref|XP_002424587.1| aspartyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212508030|gb|EEB11849.1| aspartyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 582

 Score =  302 bits (773), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 205/604 (33%), Positives = 318/604 (52%), Gaps = 42/604 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-IAK 63
           RTH+CG+L    VG  V L GWV   R  G  + L  RD YG TQ+      + F+ + +
Sbjct: 2   RTHTCGELDDIHVGQNVCLMGWVEFQR-MGKFVLL--RDGYGKTQLTIPESKSNFQSLVE 58

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +++ E VL  +G V  R A   N    TG+IE+    +++L++A+ LP  V    +  ES
Sbjct: 59  TLKPESVLLAEGTVFPRPAGQENLKQKTGKIEVIVSDLKVLNMAKNLPFSVRDFNKPNES 118

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFLV 182
           IR KYR+LDLR   +  N+  R++II +MR  +I   +F+E  TP L   +P GA++F+V
Sbjct: 119 IRMKYRYLDLRYPNMQHNLRLRSKIIYNMRKYLIEHLDFVEVETPTLFKRTPGGAQEFIV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+   +G FY+L Q+PQQ+KQLLM    DRYFQIA C+RDE  R+DR P EF QLD+EMS
Sbjct: 179 PTE-KKGKFYSLVQSPQQFKQLLMIGSIDRYFQIARCYRDEPMRNDRQP-EFTQLDIEMS 236

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +++DI N +E +L+  + E  +   +   F R+ Y++A+  YGTDKPDLR    + ++
Sbjct: 237 FCDREDIFNLIEELLKNCWPE--SLGKLKTPFPRLSYEEAMNSYGTDKPDLRFDWKLKDL 294

Query: 303 TEHFVHS------EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           T  F ++      +F++  K       + V+    + G    A  ++  E         L
Sbjct: 295 TSLFSNNINNCVGQFKL--KKFWDKKDFAVYGFVGRNG----AVSEKTAELICYTYSCEL 348

Query: 357 AYIFWRLDESGNVAGMGPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
            +I        ++  M    + L N +    I+   + + GD  F   G           
Sbjct: 349 YFI----SHVKSLKSMQDTLQALFNPIIAAEIKKITEYEKGDVLFLAFGSKKNVVESLGK 404

Query: 416 ARNHIAQEL-----GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
            R + A  L      + + N + F WI+DFP +E  ++  KI  AH+PFT P      L 
Sbjct: 405 TRVNFADYLEENGISVFDKNSYCFSWIVDFPLFEIVDD--KIQSAHHPFTQPHSKDFDLL 462

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIR---NHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
             + L +K+  +DLV NG EI  G IR    ++ +++L+   N  ++ E V +   GL  
Sbjct: 463 EKNPLKVKSLHFDLVLNGNEIGGGSIRITDGNLQKIILEKILN--MNAESVSHLIEGL-- 518

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
               G PPHGGIA G+DR++ ++  A ++REV  FP ++   D L G+P  +S ++ +  
Sbjct: 519 --NSGAPPHGGIALGLDRLMTIICKANSIREVIAFPKNRLGQDPLSGAPCDISEDEKKRY 576

Query: 588 GLRI 591
            L+I
Sbjct: 577 HLQI 580


>gi|292610800|ref|XP_699804.3| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Danio rerio]
          Length = 660

 Score =  301 bits (772), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 198/602 (32%), Positives = 322/602 (53%), Gaps = 31/602 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+CG+L  S +   V L GWV  +R     +F+ +RD  G+ Q++   D +  E+ KS
Sbjct: 71  RSHTCGELCSSHIDKEVTLCGWVQYLRQD---LFVILRDFSGLVQILIPQDESKSELKKS 127

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           + +   E V+ + G V+ R     N NI TG+IE+ A+ IE+L+ + +LP  +    +  
Sbjct: 128 LLALTVESVIMVKGRVIRRPEGQENKNISTGEIEVCAESIEVLNTSRKLPFEIKEFVKKS 187

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR  T+  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 188 EALRMQYRYLDLRSATMQNNLRLRSQMVMKMREYLCNL--HGFVDVETPTLFKRTPGGAK 245

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +F+VPS  + G FY+LPQ+PQQ+KQLLM +G DRYFQ+A C+RDE  + DR P EF Q+D
Sbjct: 246 EFVVPSG-DPGKFYSLPQSPQQFKQLLMVAGIDRYFQLARCYRDEGSKPDRQP-EFTQVD 303

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  +++ +E +++  + E  +   ++  F  + Y++A+R YG DKPD R  + 
Sbjct: 304 IEMSFVDQAGVMSLIEGLVQFSWPE--DKGQINVPFPTLTYEEAMRDYGVDKPDTRFGMK 361

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD--RMNEWARSQGQPGL 356
           + +V+  F  ++   F K   + P   V AI    G  +    D   + + A++Q    +
Sbjct: 362 LVDVSTAFQGAQIE-FIKDALLEPEGCVQAICVPEGTKHLKGKDFEFLKQAAKTQYGQEV 420

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           + +  R D S       P+++ L+    + +        GD  F  AG            
Sbjct: 421 SVVPVRADGSLK----SPLSRLLSDTAKQQLLQMAQANAGDLIFITAGPRENVRPLLGKL 476

Query: 417 RNHIAQEL-----GIINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470
           R  +A+ L      + + + F F W++DFP +   E++ ++++ AH+PFT P      L 
Sbjct: 477 RLQVAELLERYGVPVRDPSVFHFLWVVDFPLFLPKEDDPERLESAHHPFTAPVPEDAHLL 536

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
                 ++   YDLV NG EI  G IR H +   L       I KE   +    L  A  
Sbjct: 537 YTRPHMVRGQHYDLVLNGCEIGGGSIRIHNASQQLYILDT--ILKE-DPSLLSHLLEALD 593

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR+V +++GA ++R+V  FP S    DL+  +P  VS + L+   + 
Sbjct: 594 SGAPPHGGIALGLDRLVSIIVGAPSIRDVIAFPKSFRGHDLMSQAPDFVSEKDLKPYHIS 653

Query: 591 IV 592
           +V
Sbjct: 654 VV 655


>gi|195052814|ref|XP_001993375.1| GH13102 [Drosophila grimshawi]
 gi|193900434|gb|EDV99300.1| GH13102 [Drosophila grimshawi]
          Length = 1125

 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 195/602 (32%), Positives = 316/602 (52%), Gaps = 33/602 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62
           RTH+CG+L  +++   V + GW+   R +    F  +RD YG TQV+  P +   E    
Sbjct: 416 RTHNCGELTSNEINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLILPKTKGLEEYAE 472

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121
             V  E ++ ++G V+ R A T+N  + TG +E+ A K++IL+ A++ LP  +       
Sbjct: 473 SGVPIESIVRVEGTVIPRPAATVNPKMNTGHVEIEADKVDILNAAKKNLPFEIRKFNRAG 532

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
           E +R  +R+LDLR + +  N+  R+ +I  MR  +I    F+E  TP L   +P GA++F
Sbjct: 533 ERLRLTHRYLDLRFNDMQHNLRLRSAVIMRMREYLINYLGFVEVETPTLFRRTPGGAQEF 592

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 593 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 650

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF  +DDI+  +E  LR  +    +   +   F RI Y++A+ +YG DKPD R   +++
Sbjct: 651 LSFTSRDDIMQLIEETLR--YSWPKHLPKLQTPFRRITYEEAMEKYGNDKPDTRFGFLLN 708

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+E    SE             +  +AI  +          R +    ++  PG  ++ 
Sbjct: 709 NVSEIIEKSE-----NFKDKYENFSAYAIVVRASDAFWNGAARKHYEGLAKAFPGTLFV- 762

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA----DA 416
            + + + +V     + K L       I  + D+++ D  F   G  ++  +       D 
Sbjct: 763 RKFNFAKDVQER--LTKLLGTEVATEIIEKFDLEENDLLFLCIGPKVEARNLLGRIRLDY 820

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----- 471
              + + +     N + F W++DFP +E N    K++  H+PFT P   +E L       
Sbjct: 821 HEFLVENVKTKKPNDYRFLWVVDFPLFERNPTTNKLESVHHPFTAPL--VEDLDKFATSC 878

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ++L +I++  YDLV NG E+  G +R H  +  +Q F    + K +  +    L  A + 
Sbjct: 879 DNLETIRSEAYDLVLNGQEVGGGSMRIHDRD--MQQFILEQVLK-IPHDHLSHLLAALES 935

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E+++   L I
Sbjct: 936 GCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISEEEMKLYHLAI 995

Query: 592 VE 593
            E
Sbjct: 996 QE 997



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 4/101 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 240 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLMDTFLS 295

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105
              + VL I G V+ R    IN    TG++E+S   +++L+
Sbjct: 296 TPEQTVLQIVGKVLGRPKANINLKYDTGEVEVSVTNVKVLN 336


>gi|195483970|ref|XP_002090507.1| GE12772 [Drosophila yakuba]
 gi|194176608|gb|EDW90219.1| GE12772 [Drosophila yakuba]
          Length = 1141

 Score =  300 bits (768), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 203/609 (33%), Positives = 317/609 (52%), Gaps = 47/609 (7%)

Query: 5    RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62
            RTH+CG+L  +D+   V + GW+   R +    F  +RD YG TQV+  P +   E    
Sbjct: 460  RTHNCGELTSNDINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLLPKTEGLEEYAD 516

Query: 63   KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121
              V  E ++ ++G V+ R A TIN  + TG +E+ A K+ +L+ A++ LP  +       
Sbjct: 517  TGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRKFNRAG 576

Query: 122  ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
            E +R  +R+LDLR + +  N+  R+ +I  MR  ++    F+E  TP L   +P GA++F
Sbjct: 577  ERLRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLVNYLGFVEVETPTLFRRTPGGAQEF 636

Query: 181  LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 637  VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDVE 694

Query: 241  MSFVEQDDILNTMENVLRGVF-EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            +SF  +DDI+  +E  LR  + ++F    T    F RI Y++A+ +YG DKPD R   ++
Sbjct: 695  LSFTSRDDIMQLIEETLRYSWPKDFPRLQTP---FRRITYEEAMEKYGNDKPDTRFGFLL 751

Query: 300  HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNEWARSQGQPGLAY 358
            +NV+E        +  K       YE     A     + AF +    +   S G+     
Sbjct: 752  NNVSE--------IIEKSDDFKEKYEDLGAYAIVVRASEAFWNGAARKHYESLGKEFKGT 803

Query: 359  IFWRLDESGNVAGMGP-------VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
            +F R          GP       + K L       I  + D+++ D  F   G  ++  +
Sbjct: 804  LFVR--------KFGPTKDVQEKLGKLLGEDVATEIADKFDLEENDLLFLGIGPKVETRA 855

Query: 412  FAA----DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GM 466
                   D    + +   +   N F F W++DFP +E N E  +++  H+PFT+P    +
Sbjct: 856  MLGRIRLDYHEFLVENDKVKKPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDL 915

Query: 467  ESLKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
            ++   +  +L  I++  YDLV NG E+  G IR H  +  +Q F    I K +  +    
Sbjct: 916  DNFATSCENLEIIRSQAYDLVLNGQEVGGGSIRIHDRD--MQHFILEQILK-IPHDHLSH 972

Query: 525  LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
            L  A + G PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E++
Sbjct: 973  LLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISDEEM 1032

Query: 585  RELGLRIVE 593
            R   L +VE
Sbjct: 1033 RLYHLSVVE 1041



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 4/101 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 289 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLSDTFLS 344

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105
              + V+ I G V+ R    +N    TG++E+S   +++L+
Sbjct: 345 TPEQTVIQIVGKVLGRPKANVNLKYDTGEVEVSVTSVKVLN 385



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAKSV 65
            SCG+L     G FV LSG + + R +    F ++RD  G   Q+V   D     +A+ +
Sbjct: 144 QSCGELRNHHCGLFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHP-RVARRM 199

Query: 66  RS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKI 101
            +      L I GLVM R   + N  + TG+IE+  Q I
Sbjct: 200 NNMPENTTLTIVGLVMRRPHNSCNQTMPTGEIEVEVQDI 238


>gi|289674666|ref|ZP_06495556.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 330

 Score =  299 bits (765), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 153/332 (46%), Positives = 219/332 (65%), Gaps = 5/332 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
           +     EF+VFS   + +P   V A+   G  
Sbjct: 300 DQLTGVEFKVFSGPAN-DPKGRVAALRVPGAA 330


>gi|156550606|ref|XP_001604266.1| PREDICTED: similar to SD02215p [Nasonia vitripennis]
          Length = 634

 Score =  298 bits (763), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 200/601 (33%), Positives = 315/601 (52%), Gaps = 60/601 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH+CG+L + +    V L GW+   R      FL +RD YG TQ + + D A   ++  
Sbjct: 52  RTHTCGELTIFNSNENVTLCGWLEHERLGK---FLILRDSYGSTQCIIDDDKADLRKLLL 108

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--- 120
            +  E VL ++G V+ R     N  + TG+IE+  + +EIL+ A++ PLP F  R +   
Sbjct: 109 DLPLETVLTVNGTVVPRPEGQCNPKLKTGEIEVQVESLEILNTAKQ-PLP-FSIRHFNKA 166

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARD 179
            ES++ +YR+L LR   L +N+  R+ +   MR  +I +  F++ +TP L   +P GA++
Sbjct: 167 KESLQMQYRYLALRFPELQRNLRLRSWVTMKMREYLINQCEFVDVATPTLFRKTPGGAQE 226

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VP++ + G FY+L Q+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF QLD+
Sbjct: 227 FVVPTK-HLGKFYSLVQSPQQFKQLLMVGGIDRYFQMAQCYRDEGSRQDRQP-EFTQLDI 284

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV+++DI++  EN++   + E    +     F R+ Y++++  YGTD PDLR P  +
Sbjct: 285 EMSFVDREDIMDLTENLIANSWPESVEKHYPP--FPRLTYEESMETYGTDSPDLRIPGRI 342

Query: 300 HNVTE--HFVHSEF--------RVFS---KILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           H++T+  H     F         VFS   + L+ +   ++  +  +     +    ++ +
Sbjct: 343 HSITDIAHNAGDGFDLSCELYAAVFSGQQEFLTKSAKEQLIRLAEQAFPKAKLVKHKVKD 402

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406
              +    GL+Y+   L                NIVN      +  +Q+ D      G  
Sbjct: 403 LELN----GLSYLLSGLTRQ-------------NIVN------QFKLQEKDVILMAYGPK 439

Query: 407 LKFCSFAADAR---NHIAQELGI-INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
                     R     I +  G+ I  + ++F WI+DFP +E +E+ K +   H+PFTMP
Sbjct: 440 QDARQLLGKIRVEFTDIMESKGLTIRESGYKFAWIIDFPLFEIDEDTKCLKTTHHPFTMP 499

Query: 463 Q-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
               M++L     L ++  QYDL  NG EI  G IR H   +  Q F  + I    +   
Sbjct: 500 HPEDMQNLLTAP-LKVRGLQYDLTLNGSEIGGGSIRIHQKALQEQIFKMLNIDPSTMYY- 557

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
              +  A  CG PPHGGIA G+DR + ++ GA ++R+V  FP +    DL+ G+P+ +S 
Sbjct: 558 ---MLEALDCGAPPHGGIALGLDRYMSVICGAPSIRDVIAFPKTMEGRDLMSGAPARISE 614

Query: 582 E 582
           E
Sbjct: 615 E 615


>gi|195115020|ref|XP_002002065.1| GI14195 [Drosophila mojavensis]
 gi|193912640|gb|EDW11507.1| GI14195 [Drosophila mojavensis]
          Length = 1190

 Score =  297 bits (761), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 203/610 (33%), Positives = 324/610 (53%), Gaps = 49/610 (8%)

Query: 5    RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62
            RTH+CG+L  +D+   V + GW+   R +    F  +RD YG TQV+  P +   E    
Sbjct: 479  RTHNCGELTSNDINEKVVVCGWLEFQRMNK---FFILRDAYGQTQVLILPKTKGLEEYAE 535

Query: 63   KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121
              V  E ++ ++G V+ R A TIN  + TG +E+ A KI++L+ A++ LP  +       
Sbjct: 536  TGVPIESIVRVEGTVIPRPAATINPKMTTGHVEIEADKIDVLNAAKKNLPFEIRKFNRAG 595

Query: 122  ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
            E +R  +R+LDLR + +  N+  R+ +I  MR  +I    F+E  TP L   +P GA++F
Sbjct: 596  ERLRLTHRYLDLRFNDMQHNLRLRSAVIMRMREYLINYLGFVEVETPTLFRRTPGGAQEF 655

Query: 181  LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 656  VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 713

Query: 241  MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            +SF  +DDI+  +E  LR  + +  +   +   F RI Y++A+ +YGTDKPD R   +++
Sbjct: 714  LSFTSRDDIMQLIEETLRYSWPK--HLPKLQTPFRRITYEEALEKYGTDKPDTRFCFLLN 771

Query: 301  NVTEHFVHSE-----FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
            NV++    SE     +  FS    V     V A  A   G  R   + +     S+   G
Sbjct: 772  NVSDIIEKSENFKGKYNDFSAYAIV-----VRASEAFWNGAARKHYESL-----SKAFSG 821

Query: 356  LAYIFWRLDESGNVAGMGPVAKHLNIVNTE-AIRV--RLDMQDGDSCFFIAG--DPLK-- 408
              ++  + + + +V       +   ++ TE AI +  + D+++ D  F   G  D  +  
Sbjct: 822  TLFV-RKFNFAKDVQ-----ERLTKLLGTEVAIEIIEKFDLEENDLLFLCIGPKDETRNL 875

Query: 409  FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                  D  + + + +     N + F W++DFP +E N    +++  H+PFT P   +E 
Sbjct: 876  LGRIRVDYHDFLVENVKTKKPNEYRFLWVVDFPLFERNRVTNQLESVHHPFTAPL--VED 933

Query: 469  LKG-----NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
            L       ++L SI++  YDLV NG E+  G +R H  +  +Q F    + K +  +   
Sbjct: 934  LDKFATSCDNLESIRSEAYDLVLNGQEVGGGSMRIHDRD--MQQFILEQVLK-IPHDHLA 990

Query: 524  GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
             L  A + G PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E 
Sbjct: 991  HLLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISEED 1050

Query: 584  LRELGLRIVE 593
            ++   + I E
Sbjct: 1051 MKLYHINIQE 1060



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 4/110 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 307 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLMDTFMS 362

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
              + VL I G V+ R    IN    TG++E+S   +++L+  +    P+
Sbjct: 363 TPEQTVLQIVGKVLGRPKANINLKYDTGEVEVSVTSVKVLNPDDPYEGPI 412


>gi|116515132|ref|YP_802761.1| AspS [Buchnera aphidicola str. Cc (Cinara cedri)]
 gi|116256986|gb|ABJ90668.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 571

 Score =  295 bits (754), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 189/582 (32%), Positives = 313/582 (53%), Gaps = 23/582 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63
           RT  CG++   D+   + + GWVH++R    IIF+DI+D  GI QV+     ++ F + K
Sbjct: 2   RTKYCGEIKKKDINKIITICGWVHKIRSLKNIIFIDIKDITGIIQVIFLKKYNSNFSLVK 61

Query: 64  SVRSEWVLCIDGLVMSRSAET-INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++R+++ + I GLV+ +   T  N        E+ A K++I + +  LP+P   ++E  E
Sbjct: 62  TIRNDYCIKIKGLVILKKKLTYFNTQEKENFFEIIAFKLKIFNPS--LPIPFDYKKENKE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IRFK+R+LDLRR  +   +  R++I   +R   I + F+E  TPILT S+PEGA+D+LV
Sbjct: 120 DIRFKFRYLDLRRFYMFHKLQTRSKITTIIRNFFIKKKFLEIETPILTRSTPEGAKDYLV 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            SR+  G ++ALPQ+PQ +KQLLM SG DRYFQIA CFRDED RSDR P EF Q+D+E++
Sbjct: 180 YSRLYPGKYFALPQSPQLFKQLLMISGIDRYFQIAKCFRDEDLRSDRQP-EFTQIDIEIA 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---M 299
           F ++  +   +  +++ ++ + +N          I Y ++I +YGTDKPDLRNPI    +
Sbjct: 239 FKKKKFLQKLINKLIKKLWLKINNYTI--KKIKNITYKESILKYGTDKPDLRNPIQFVEL 296

Query: 300 HNVTEHFVHSEF-----RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354
           +++  +F    F     +  ++I+S+     +  I        + F +++N       + 
Sbjct: 297 YDIFNNFYKKFFPWLLIKNINRIISIKIPEGIKKIRDNKIYKYKKFLEKLNFNYFIYVKI 356

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
                +   D     + +         + T AI       +GD  F IA       + + 
Sbjct: 357 INIKKYIIKDNRNIFSKIDKKTLKEFFLKTSAI-------NGDIIFIIAEKYNIANNISN 409

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  I  +L I N       WI  FP ++ +++   +   H+PFT P+   ++++  + 
Sbjct: 410 LLRKKIGIDLKITNLKKICPVWITKFPLFKLDKKN-NLKSVHHPFTSPEKNSKNIELLNP 468

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L I +  +DLV NG+EI  G  R +  ++ ++ F+ + I+K   + +FG    + Q G P
Sbjct: 469 LKIISSAFDLVINGYEIGGGSERIYNYQLQIKIFNILKINKNKQKKKFGFFINSLQYGAP 528

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
           PH G+A G+DR+VMLL     + +V  FP + +   L+ G+P
Sbjct: 529 PHLGLALGLDRLVMLLTNCNTISDVIAFPKTNSAICLMTGAP 570


>gi|530412|emb|CAA83720.1| Asp-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 483

 Score =  295 bits (754), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 174/498 (34%), Positives = 276/498 (55%), Gaps = 20/498 (4%)

Query: 45  YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL 104
           YGITQ+V   ++    +  ++++E+V+ I G+V+ R  +++N  +ITG+IE+  + + ++
Sbjct: 2   YGITQLVIEQENIN--LINNLKNEYVIEISGIVVKR--KSVNKELITGEIEVIVKDLLVI 57

Query: 105 SVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           + +E  P  +  +    E  R  YR+LDLRR  +  N++ R +I + +R  +   NF+E 
Sbjct: 58  NKSELTPFVLENDVNVNEDTRLTYRYLDLRRQVMQNNLIIRAKINHIIRNYLTDLNFLEV 117

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP    S+PEGAR FLVPSR+N+  FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED
Sbjct: 118 ETPYFAKSTPEGARHFLVPSRLNKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDED 177

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            R DR P EF QLD+EMSF   +D++   E++++ + +E  N   +    LR+ Y DAI 
Sbjct: 178 LRIDRQP-EFTQLDLEMSFATSEDVMQISESLIKKILKEVKNFE-IKEPLLRLSYKDAID 235

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            YG+DKPDLR  + +H + + F +S+ ++F   L     Y + A+        +   + +
Sbjct: 236 LYGSDKPDLRYELKIHTLNDIFKNSDIKMF---LDSQNKY-IRAVCIDQLLTKKQL-EEL 290

Query: 345 NEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG 404
           N+ A+      +A+I     +  N A  G +A  L  V  + +    ++Q+  +     G
Sbjct: 291 NQQAKQFHFNSIAFI-----KVENNAWSGSLASQLTEVQKKQLIEEFNIQNKATIILNIG 345

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
              +        R  +A+   +   + F+  W++DFP +E++E+E +   AH+PFT P+ 
Sbjct: 346 KYEEISQLMGAIRISLAKMFNLETKDDFKLLWVVDFPLFEFSEQENRYVAAHHPFTSPKE 405

Query: 465 GMESLKGNDLLSIKAF--QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
             ESL   D     A    YDLV NGFEI  G  R   SE+  + F  V ++++ VE  F
Sbjct: 406 --ESLADFDTNKKDALACAYDLVMNGFEIGGGSQRITNSEIQQRMFDAVELNQKQVEANF 463

Query: 523 GGLYRAFQCGMPPHGGIA 540
           G    A++ G P H GIA
Sbjct: 464 GWFMNAYKYGAPYHAGIA 481


>gi|323210669|gb|EFZ95547.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
          Length = 410

 Score =  295 bits (754), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 170/401 (42%), Positives = 238/401 (59%), Gaps = 8/401 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG   +R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403
               G      PVAK L     EAI  R   QDGD  FF A
Sbjct: 356 ERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGA 396


>gi|195387357|ref|XP_002052362.1| GJ17510 [Drosophila virilis]
 gi|194148819|gb|EDW64517.1| GJ17510 [Drosophila virilis]
          Length = 1132

 Score =  295 bits (754), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 194/600 (32%), Positives = 317/600 (52%), Gaps = 45/600 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62
           RTH+CG+L  +++   V + GW+   R +    F  +RD YG TQV+    +   E    
Sbjct: 412 RTHNCGELTSNEINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLILARTKGLEEYAD 468

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121
             V  E ++ ++G V+ R A TIN  + TG +E+ A K+++L+ A++ LP  +       
Sbjct: 469 SGVPIESIVRVEGTVIPRPAATINPKMTTGHVEIEADKVDVLNAAKKNLPFEIRKFNRAG 528

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
           E +R  +R+LDLR + +  N+  R+ +I  MR  +I    F+E  TP L   +P GA++F
Sbjct: 529 ERLRLTHRYLDLRFNDMQHNLRLRSAVIMRMREYLINYLGFVEVETPTLFRRTPGGAQEF 588

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 589 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 646

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF  +DDI+  +E  LR  +    +   +   F RI Y++A+ +YGTDKPD R   +++
Sbjct: 647 LSFTSRDDIMQLIEETLR--YSWPKHLPKLQTPFRRITYEEALEKYGTDKPDTRFGFLLN 704

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV++        +  K  +    YE +   A     + AF    N  AR   +  L+ +F
Sbjct: 705 NVSD--------IVEKSENFKGKYEDFGAYAIVVRASEAFW---NGAARKHYE-SLSKVF 752

Query: 361 ------WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
                  + + + +V  +  + K L       I  + D+++ D  F   G  ++  +   
Sbjct: 753 SGTLFVRKFNFANDV--LDRLTKLLGTEVATEIIEKFDLEENDLLFLCIGPKVETRNLLG 810

Query: 415 ----DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
               D    + + +     N + F W++DFP +E N    +++  H+PFT P   +E L 
Sbjct: 811 RIRLDYHEFLVENVKTKKTNDYRFLWVVDFPLFERNTATNQLESVHHPFTAPL--VEDLD 868

Query: 471 G-----NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
                 ++L +I++  YDLV NG E+  G +R H  +  +Q F    + K +  +    L
Sbjct: 869 KFATSCDNLETIRSEAYDLVLNGQEVGGGSMRIHDRD--MQQFILEQVLK-IPHDHLSHL 925

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             A + G PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E+++
Sbjct: 926 LSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISEEEMK 985



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 4/110 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 240 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLMDTFLS 295

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
              + VL I G V+ R    IN    TG++E+S   +++L+  +    P+
Sbjct: 296 TPEQTVLQIVGKVLGRPKANINLKYDTGEVEVSVTNVKVLNPDDPYEGPI 345


>gi|153839738|ref|ZP_01992405.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149746736|gb|EDM57724.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 452

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 174/447 (38%), Positives = 252/447 (56%), Gaps = 11/447 (2%)

Query: 155 RMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
           R + +N F++  TP+LT ++PEGARD+LVPSRV++GSFYALPQ+PQ +KQLLM SGFDRY
Sbjct: 10  RFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYALPQSPQLFKQLLMMSGFDRY 69

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +QI  CFRDED R+DR P EF Q+D+E SF+  D +    E ++R +++E  N +     
Sbjct: 70  YQIVKCFRDEDLRADRQP-EFTQIDIETSFMTADQVREVTEKMVREMWQELLNVDL--GE 126

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           F  + + +AIRR+G+DKPDLRNP+ + +V +     EF+VFS   +   G  V  I   G
Sbjct: 127 FPVMPFSEAIRRFGSDKPDLRNPLELVDVADLVKDVEFKVFSGPANDEKG-RVAVIRVPG 185

Query: 334 GGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM-GPVAKHLNIVNTEAIRVRL 391
           G    R   D   E+    G  GLA++    D +  V G+  PVAK L+      I  R 
Sbjct: 186 GAELTRKQIDGYAEFVGIYGAKGLAWMKVN-DRAAGVEGIQSPVAKFLSEDVINGILDRT 244

Query: 392 DMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK 451
             + GD   F A             R  + ++LG+     +   W++DFP +E  ++E  
Sbjct: 245 QAESGDIILFGADKANIVAEALGALRLKLGKDLGLTKEGTWAPLWVVDFPMFE-EDDEGN 303

Query: 452 IDFAHNPFTMPQG-GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   H+PFT P G   E LK N  ++  +  YD+V NG+E+  G +R H +E+    F  
Sbjct: 304 LHAMHHPFTSPLGVTAEELKANPAVA-NSNAYDMVLNGYEVGGGSVRIHNAEMQAAVFDI 362

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +GI  E  + +FG L  A + G PPH G+A G+DR+VMLL G +N+R+V  FP +     
Sbjct: 363 LGIDAEEQQLKFGFLLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFPKTTAAAC 422

Query: 571 LLMGSPSTVSVEQLRELGLRIVENPKK 597
           LL  +PS  +   L EL + +     K
Sbjct: 423 LLTDAPSIANPAALEELAIAVTAAKAK 449


>gi|114565508|ref|XP_001150144.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 5
           [Pan troglodytes]
          Length = 594

 Score =  294 bits (753), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 198/599 (33%), Positives = 306/599 (51%), Gaps = 78/599 (13%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  + 
Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMK 340

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + ++++ F ++E       LS            K  G  +A C                 
Sbjct: 341 IIDISDVFRNTEIGFLQDALS------------KPHGTVKAIC----------------- 371

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                        +   AK+L   + E+IR              A D    CS     R 
Sbjct: 372 -------------IPEGAKYLKRKDIESIRK------------FAADHFNQCSLLGKLRL 406

Query: 419 HIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGN 472
             A  L   G++  +   F F W++DFP +   EE  ++++ AH+PFT P      L   
Sbjct: 407 ECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYT 466

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +    ++  YDLV NG EI  G IR H +E  LQ +    + KE V+     L +A   G
Sbjct: 467 EPKKARSQHYDLVLNGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALDYG 523

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            PPHGGIA G+DR++ L+ G++++R+V  FP S    DL+  +P +V  E+L+   +R+
Sbjct: 524 APPHGGIALGLDRLICLVTGSRSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRV 582


>gi|301603688|ref|XP_002931512.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Xenopus
           (Silurana) tropicalis]
          Length = 620

 Score =  293 bits (751), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 194/602 (32%), Positives = 301/602 (50%), Gaps = 59/602 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L  + VG  V L GW+   R H   +F+ +RD +G+TQV+   D  C ++ K 
Sbjct: 55  RTHTCGELCSAHVGQEVALYGWLQYQR-HD--LFVVLRDFHGLTQVILPQDEKCSQLRKM 111

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +     E V+ + G V+ R     N  + TG+IE+ A++  IL+  ++LP  +    +  
Sbjct: 112 LSEASLESVVVVKGTVIRRPPGQDNPRMSTGEIEVLAKEAHILNTCKKLPFEIKDAVKKT 171

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LD+R   L  N+  R++I+  MR   C +    F++  TP L   +P GA+
Sbjct: 172 EALRMQYRYLDIRSGQLQSNLRLRSKIVMKMREYLCNL--HGFVDVETPTLFKRTPGGAK 229

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +F+VP+R   G FY+LPQ+PQQ+KQLL+  G DRYFQIA C+RDE  + DR P EF Q+D
Sbjct: 230 EFVVPTR-EPGKFYSLPQSPQQFKQLLIIGGLDRYFQIARCYRDEGSKPDRQP-EFTQVD 287

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+                                C                  ++
Sbjct: 288 IEMSFVDXXXXXXXX--------------XXXXXXXXXAC----------------TLLV 317

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGL 356
           + +VT  F   +     + L   P   V AI   GG     R   D M E  + Q    +
Sbjct: 318 IQDVTSQFREVQLGYVQETLR-KPHGCVKAICIPGGAKFIKRKELDSMQELVKQQYNQEV 376

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
             +  R D S       P+ K L+    E++   ++ +  D   F AG+ ++ CS     
Sbjct: 377 VPVILRADSSWK----SPLEKFLSAKLKESLTDAMEAKSEDILLFAAGEHIRACSALGKL 432

Query: 417 RNHIAQEL-----GIINCNCFEFCWIMDFPFYEWNEE-EKKIDFAHNPFTMPQGGMESLK 470
           R   A +L      + +   F F W++DFP +   E+ E +++ AH+PFT P     +L 
Sbjct: 433 RLDAAAQLEEYGVPLRDPTAFHFLWVVDFPLFLPKEDNELELESAHHPFTAPHPEDTALL 492

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D   +++  YDLV NG E+  G IR H S   LQ +    + KE V +    L  A Q
Sbjct: 493 HTDPAKVRSQHYDLVLNGSEVGGGSIRIHNSN--LQRWVLQDVLKEDV-SLLSHLLEALQ 549

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR++ +++GA ++R+V  FP S    DL+  +P  VS E L++  ++
Sbjct: 550 SGAPPHGGIALGLDRLIAIIVGAPSIRDVIAFPKSFRGRDLMSNAPDMVSAEDLQQYHIQ 609

Query: 591 IV 592
           ++
Sbjct: 610 VI 611


>gi|260810833|ref|XP_002600127.1| hypothetical protein BRAFLDRAFT_204226 [Branchiostoma floridae]
 gi|229285413|gb|EEN56139.1| hypothetical protein BRAFLDRAFT_204226 [Branchiostoma floridae]
          Length = 519

 Score =  293 bits (751), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 177/513 (34%), Positives = 280/513 (54%), Gaps = 25/513 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+CG+L     G  V L GWV   R     +F+ +RD YG+ Q+V   D    ++ ++
Sbjct: 8   RSHTCGELRAVHAGEDVTLCGWVQFQRKQ---LFVTLRDSYGVIQLVLPQDKKHADMKQT 64

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +     E V+C+ G+V  R     N  + TG +E++  K+E+++ ++ LP  +    +  
Sbjct: 65  LAHLPPESVVCVQGIVQLRPIGEANKAMSTGDVEVAVSKVEMVNKSKSLPFQIRDFFQVN 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR--CRMIAENF--IECSTPILTASSPEGA 177
           E +R K+R+LDLR   L  N+  R+++I  MR   + ++  F  ++  TP L   +P GA
Sbjct: 125 EHLRLKHRYLDLRGSQLQHNLRLRSQVIMKMREVNKHLSSQFRFVDVETPTLFRRTPGGA 184

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R+F+VPSR  +G F+ LPQ+PQQ+KQLLM  G DRYFQIA C+RDED R DR P EF Q+
Sbjct: 185 REFVVPSR-EKGKFFCLPQSPQQFKQLLMVGGVDRYFQIAKCYRDEDLRQDRQP-EFTQV 242

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV+Q  +   +E +L+  + +     T+   F R+ Y DA+++YG+DKPD R  +
Sbjct: 243 DIEMSFVDQRGVEQLIEELLQHAWPDGKGALTLP--FPRMQYKDAMKKYGSDKPDTRFGM 300

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD--RMNEWARSQGQPG 355
            +++V++    S   VF ++L  N G  + AI AK    +    D  ++ + A+     G
Sbjct: 301 KLNDVSDIMRSSGVTVFERLLKDNSGNTIQAINAKQAAPHMKNKDIEKLQDLAKQMMSKG 360

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L+ +  ++   G + G   +AKH++     A+   L  ++GD      G+ LK C     
Sbjct: 361 LSIL--QILPGGEMKGA--MAKHISSPCRNALLQELQAEEGDMLLLAGGEHLKTCELLGR 416

Query: 416 ARNHIA-----QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
            R   A     Q + + + + F F WI DFP +   E+   ++ AH+PFT P      L 
Sbjct: 417 IRVECADILETQGVQLRDPDVFNFLWITDFPLFVPKEDGSGLESAHHPFTAPHPDDLDLV 476

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
            +    +++  YDLV NG EIA G IR H +EV
Sbjct: 477 YSHPHKVRSQHYDLVLNGNEIAGGSIRIHDAEV 509


>gi|295114803|emb|CBL35650.1| Aspartyl-tRNA synthetase [butyrate-producing bacterium SM4/1]
          Length = 401

 Score =  293 bits (749), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 162/359 (45%), Positives = 228/359 (63%), Gaps = 9/359 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           R+H C +L   ++G  V + GWV + R  GGIIF+D+RD  G+ Q++   A+  S  F  
Sbjct: 10  RSHRCTELSTENIGENVTVMGWVQKSRNKGGIIFVDLRDRSGLLQIIFEEADCGSESFAK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ + G V +RS   +N N+ TG IE+ A  + ILS +E  P P+    +  
Sbjct: 70  AEKLRSEFVIAVTGKVEARSG-AVNENLKTGAIEIRANALRILSESETPPFPIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L KN++ R+R+    R  +  E F+E  TP L  S+PEGARD+L
Sbjct: 129 EELRLKYRYLDLRRPDLQKNLMTRSRVTTLTRAFLAEEGFLEIETPTLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+L+  E +L+ +F+E   G  +     R+ + +A+ R+G+DKPDLR  + + N
Sbjct: 248 SFVDVDDVLDVNERLLKKLFKEIC-GFDLQLPIQRMTWREAMDRFGSDKPDLRFGMELKN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYI 359
           V+E     +F VF   L    G  V  I A+G  G  R   D + E+A+  G  GLAY+
Sbjct: 307 VSETVKDCQFVVFKSAL--ENGGSVRGINAEGQAGMPRKKIDALVEFAKGFGAKGLAYL 363


>gi|307195778|gb|EFN77592.1| Aspartyl-tRNA synthetase, mitochondrial [Harpegnathos saltator]
          Length = 557

 Score =  291 bits (744), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 192/551 (34%), Positives = 284/551 (51%), Gaps = 24/551 (4%)

Query: 38  FLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIEL 96
           F+ +RD YG TQ++   D     E  + +  E VL I G V SR     N  + TG IE+
Sbjct: 4   FIILRDSYGSTQLLIPEDRKDLMETMRDIPYESVLSITGKVASRPEGLENKKMKTGDIEV 63

Query: 97  SAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155
             + + IL+VA   LP+ +    +  E  + KYR+L LR   L +N+  R++ I  MR  
Sbjct: 64  HIESLVILNVASRNLPIFIRDYNKATEVQQMKYRYLSLRYSELQRNLRMRSQFIMKMREF 123

Query: 156 MIAE-NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           +I E NF++  TP L   +P GA++F+VP+R   G FY+L Q+PQQ+KQLLM   FDRYF
Sbjct: 124 LINECNFVDIETPTLFKYTPGGAQEFIVPTR-QPGKFYSLVQSPQQFKQLLMVGSFDRYF 182

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           Q+A C+RDE  R DR P EF QLD+EMSFV+Q+ ++N +EN+L  V+       ++   F
Sbjct: 183 QVARCYRDETARHDRQP-EFTQLDIEMSFVDQNGVINLVENLL--VYSWPEELGSIEIPF 239

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE-FRVFSKILSVNPGYEVWAIPAKG 333
             I Y DA+  YGT++PDLR P  + N+T H V S   +   ++  V           K 
Sbjct: 240 KHITYKDAMELYGTEQPDLRIPYQIRNLT-HLVDSTILQETMRLQDVEQKVFALVFSNKS 298

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
               ++  D++++  R         +  +++   N +G   + K  +   TE I     +
Sbjct: 299 KWLTKSVRDKLSK-IRDDYFTTTKLVALKIE---NNSGRAQLEKIFSKNITENIVQFCKL 354

Query: 394 QDGDSCFFIAG---DPLKFC-SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE 449
           Q+ D      G   D LK       +  N +  +   I  +  +F W+ DFP + + E  
Sbjct: 355 QEEDVILLAVGHYDDALKLLGKLRVEFTNLLEAQGEQIRSSKTKFLWVTDFPLFTFKE-- 412

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
            K++  H+PFT P         ND L ++   YDLV NG EIA G IR H + +  Q  +
Sbjct: 413 -KLESTHHPFTQPHLDDIGYLANDPLKVRGLHYDLVMNGSEIAGGSIRIHDANLQRQILN 471

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            + I     E     +  A   G PPHGGIA G+DR+V +L  AKN++ V  FP S    
Sbjct: 472 LLNID----ETNLSHMLEALTYGAPPHGGIALGLDRLVCMLCNAKNIKSVIAFPKSIEGQ 527

Query: 570 DLLMGSPSTVS 580
           DL+ G+P  +S
Sbjct: 528 DLMAGAPDVIS 538


>gi|195436782|ref|XP_002066334.1| GK18240 [Drosophila willistoni]
 gi|194162419|gb|EDW77320.1| GK18240 [Drosophila willistoni]
          Length = 1078

 Score =  290 bits (741), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 196/599 (32%), Positives = 312/599 (52%), Gaps = 43/599 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62
           RTH+CG+L  +++   V + GW+   R +    F  +RD YG TQV+  P +   E  + 
Sbjct: 411 RTHNCGELTSNEINDKVVICGWLEFQRMNK---FFILRDAYGQTQVLLLPKTKGLEEYVD 467

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121
             V  E ++ ++G V+ R A TIN  + TG +E+ A  + +L+ A++ LP  +       
Sbjct: 468 TGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADNVTVLNPAKKNLPFEIRKFNRAG 527

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
           E +R  +R+LDLR + +  N+  R+ +I  MR  +I    F+E  TP L   +P GA++F
Sbjct: 528 ERLRLTHRYLDLRFNDMQHNLRLRSSVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 587

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 588 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGMDRYFQVARCYRDEATRPDRQP-EFTQLDIE 645

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF  +DDI+  +E  LR  +    + + +   F RI Y++A+ +YG DKPD R  ++++
Sbjct: 646 LSFTSRDDIMQLIEETLR--YSWPKHLSKLQTPFRRITYEEALEKYGCDKPDTRFGLLLN 703

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ----GQPGL 356
           NVT+        +  K       Y+ +   A     + AF    N  AR      G+   
Sbjct: 704 NVTD--------IIEKSDEFKEKYDDFGAYAIVVRASEAFW---NGAARKHYEGLGKDFK 752

Query: 357 AYIFWR-LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA- 414
             +F R    S +V     + K L     + +  + D+++ D  F   G   +  S    
Sbjct: 753 GTLFVRKFMYSKDVEER--LTKLLGEQVAKEVTEKFDLEENDLLFLGIGPKEETRSLLGR 810

Query: 415 ---DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
              D    + +       + + F W++DFP +E N +  +++  H+PFT P    E L  
Sbjct: 811 IRLDYHEFLVENGKAKKPHEYRFLWVIDFPLFERNSQTNQLESVHHPFTAPHP--EDLDN 868

Query: 472 -----NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
                ++L SI++  YDLV NG E+  G IR H  +  +Q F    + K +       L 
Sbjct: 869 FANQCDNLESIRSQAYDLVLNGQEVGGGSIRLHDRD--MQHFILDQVLK-IPHEHLSHLL 925

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
            A + G PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E+++
Sbjct: 926 SALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPIAISDEEMK 984



 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 4/110 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 241 RDLTCNDLRRDDVGKSVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLMDTFLS 296

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
              + VL I G V+ R    IN    TG++E+S   ++IL+  +    P+
Sbjct: 297 TPDQTVLQIVGKVLGRPKANINLKYDTGEVEVSVTSVKILNPDDPYEGPI 346


>gi|170039919|ref|XP_001847765.1| aspartyl-tRNA synthetase, mitochondrial [Culex quinquefasciatus]
 gi|167863507|gb|EDS26890.1| aspartyl-tRNA synthetase, mitochondrial [Culex quinquefasciatus]
          Length = 676

 Score =  288 bits (738), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 196/602 (32%), Positives = 303/602 (50%), Gaps = 39/602 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-K 63
           RTH+CG L  S  G  V L GW+  VR +   +F  +RD YG TQVV  P++    +   
Sbjct: 84  RTHNCGQLRASHAGQKVTLCGWLEYVRMN---MFFTLRDGYGSTQVVV-PEAVTNAVKLD 139

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPE 122
            +  E +L + G V+ R     N    TG+IE+    +E+L+ A   LP+ +    +  E
Sbjct: 140 GIPFESILKVTGTVVKRPYGQENGQQATGEIEVIMDSVEVLNPARSRLPIDIQEHNQAKE 199

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFL 181
            +R ++R++DLR   L  N+  R++II  MR  MI    FIE  TP L   +P GA++F+
Sbjct: 200 FLRIEHRYIDLRSAKLQHNLRLRSQIIMKMREFMINRCGFIEVETPTLFRRTPGGAQEFV 259

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R     FY+L Q+PQQ+KQ+LM+   DRYFQ+A C+RDE  R DR P EF QLD+E+
Sbjct: 260 VPTR-KPDHFYSLVQSPQQFKQMLMSGAIDRYFQVARCYRDEATRPDRQP-EFTQLDLEL 317

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF ++  I++ +E +L   +   +  + +   F R+ Y +A+ RYG DKPD R  + + +
Sbjct: 318 SFTDRHQIMSLVEGILDASWP--NQLHPLQLPFPRMTYQEAMSRYGCDKPDTRFGLDLRD 375

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-----RAFCDRMNEWARSQGQPGL 356
           +T   + S  ++   +    P +  +AI AK   GN      A    + E+ R +    +
Sbjct: 376 LTT-ILSSNEKMRHGV--ATPEFGAFAIVAKPPNGNPKTFKTALTKVLKEYPRCKFAVSV 432

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
               W      N+ G         +  T  I+ RL +  GD      G   +        
Sbjct: 433 VSDSWTESSIVNLFG---------VRETAEIKERLKLGTGDLMLLGYGKASEAQEMMGRV 483

Query: 417 RNHIAQELGIINCNCFE------FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESL 469
           R  +  E+   N           F WI+DFP +  NEE  +++  H+PFT      M+ L
Sbjct: 484 RLALYTEMEERNLRVTRSVLAPNFVWIVDFPMFAANEETGQLETVHHPFTTAHPEDMDKL 543

Query: 470 KG-NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +   DL SI++  +DLV NG EI  G +R H + +     +++    ++  +    L  A
Sbjct: 544 RSKQDLASIRSQSFDLVWNGMEIGGGSVRIHEAALQRMVLNDI---LQIEHSHLQHLLDA 600

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
              G PPHGG A G+DR + L+  AK++REV  FP + N  D L  +P  ++ E+ R   
Sbjct: 601 LDSGCPPHGGFAIGLDRYISLICRAKSIREVIAFPKTINGKDPLSKAPVRITDEEKRLYH 660

Query: 589 LR 590
           +R
Sbjct: 661 IR 662


>gi|195147520|ref|XP_002014727.1| GL18794 [Drosophila persimilis]
 gi|194106680|gb|EDW28723.1| GL18794 [Drosophila persimilis]
          Length = 1091

 Score =  288 bits (738), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 197/618 (31%), Positives = 314/618 (50%), Gaps = 64/618 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62
           RTH+CG+L  +++   V + GW+   R +    F  +RD YG TQV+  P +   E    
Sbjct: 406 RTHNCGELTSNEINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLLPKTKGLEEYSE 462

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121
             V  E ++ ++G V+ R   T+N  + TG +E+ A  + +L+ +++ LP  +       
Sbjct: 463 TGVPIESIVRVEGTVIPRPGATVNPKMSTGHVEVEADTVLVLNPSKKNLPFEIRKFNRAG 522

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
           E +R  +R+LDLR + +  N+  R+ +I  MR  ++    F+E  TP L   +P GA++F
Sbjct: 523 ERLRLTHRYLDLRFNDMQHNLRLRSSVIMKMREYLVNYLGFVEVETPTLFRRTPGGAQEF 582

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 583 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGVDRYFQVARCYRDEATRPDRQP-EFTQLDIE 640

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF  +D I+  +E  LR  +    +   +   F RI Y++A+ +YG DKPD R   +++
Sbjct: 641 LSFTSRDGIMQLIEETLR--YSWPKHLPKLQTPFRRITYEEALEKYGNDKPDTRFGFLLN 698

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE--W---ARSQ---- 351
           NV+E        +  K       YE       GG    A   R +E  W   AR      
Sbjct: 699 NVSE--------IIDKSEEYKGKYE-------GGLAAYAIVVRASEAFWNGAARKHYEGL 743

Query: 352 GQPGLAYIFWRLDESGNVAGMGP-------VAKHLNIVNTEAIRVRLDMQDGDSCFFIAG 404
           G+  +  +F R          GP       + K L       I  + D+++ D  F   G
Sbjct: 744 GKDFIGTLFVR--------KFGPATDVQDRLGKLLGEQVANEITEKFDLEENDLLFLGIG 795

Query: 405 DPLKFCSFAA----DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
             ++  +       D  + + + + +   N + F W++DFP +E N E  +++  H+PFT
Sbjct: 796 PKVETRALLGRIRLDYHDFLVENVKMKKPNDYRFLWVIDFPLFERNRETNQLESVHHPFT 855

Query: 461 MPQGGMESLKG-----NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
            P   ++ L        +L +I++  YDLV NG E+  G IR H  +  +Q F    I K
Sbjct: 856 QPH--IDDLDNFATSCENLENIRSQAYDLVLNGQEVGGGSIRIHDRD--MQQFILEQILK 911

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
            +       L  A + G PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +
Sbjct: 912 -IPHEHLSHLLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNA 970

Query: 576 PSTVSVEQLRELGLRIVE 593
           P  +S E ++   L ++E
Sbjct: 971 PVPISEEDMKLYHLSVLE 988



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 4/101 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 234 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLIDTFMS 289

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105
              + VL + G V+ R    IN    TG++E+S   ++IL+
Sbjct: 290 TPDQTVLQVVGKVLGRPKANINLKYDTGEVEVSVTSVKILN 330


>gi|320167572|gb|EFW44471.1| aspartate tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 654

 Score =  288 bits (737), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 197/632 (31%), Positives = 308/632 (48%), Gaps = 77/632 (12%)

Query: 4   YRTHSCGDLGVSD-------------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           YR+H+CG +  ++             +G  V+++GW+   R  G  +FL IRD +G  QV
Sbjct: 64  YRSHTCGAVAKANAESAVGQPGSIPCIGDQVKVAGWLEFKRLVGDNVFLSIRDIHGSVQV 123

Query: 51  VANPD-----SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105
           V   +     +    +   +  + V+ I G+V +R    +        +E++A  + +L+
Sbjct: 124 VFRQEDFVGFTEVRALIDKLPKQSVVSISGIVTARPQTAVTE---ASAVEIAASSLVVLN 180

Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
            A  +P     +    E +R ++R+ DLR   L  ++  R+++   +R  +  E F+E  
Sbjct: 181 RATLVPFD-HQQTNVSEELRQQHRYYDLRNPKLQHSLQVRSKVTQVIRSVLADEGFLEVE 239

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP L   +PEGAR+FLVP+R   G F+ALPQ+PQQYKQ+LM +G D+YFQ A C+RDED 
Sbjct: 240 TPTLFKRTPEGAREFLVPTR-TPGQFFALPQSPQQYKQMLMVAGVDKYFQFARCYRDEDL 298

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           R+DR P EF QLDMEMSF+   DI N +E ++   + E  +G  +   F R+ Y +A+ +
Sbjct: 299 RADRQP-EFTQLDMEMSFIRPIDIQNVIEKIVARAWLEV-HGMKLELPFRRMPYQEAMEQ 356

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
           YG DKPD R  + + N+         +   ++LS                  R F  ++ 
Sbjct: 357 YGIDKPDTRFGMKLQNL---------QACKELLS-------------QASVARGFRVQVP 394

Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT---EAIRVRLDMQDGDSCFFI 402
           E  RS  +  L  +   L      A    V K  N +     +A   +LD+   D     
Sbjct: 395 ESLRSPFKKALPRLIKEL------ALRNAVTKPFNGLPAALEDATLAQLDLVGADFVCIA 448

Query: 403 AGDPLK-FCSFAADARNHIAQEL-----GIINCNCFEFCWIMDFPFYEWNEEEKKID--- 453
            GD  +         R  +A EL      + N N F F W+ DFP +  ++  +  D   
Sbjct: 449 TGDHAESVLQRLGKLRLAVAAELERLGHPLRNPNEFHFLWVEDFPLFTESDTAQAADGTM 508

Query: 454 ---FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH---MSEVMLQA 507
                H+PFT P      L   D   ++   YD+V NG+E+  G IR H   M E +++ 
Sbjct: 509 ALEATHHPFTAPHPNDAHLVFTDPRKVRGLHYDIVVNGWELGGGSIRIHDSDMQERLIRE 568

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                I+K      F  L +A + G PPHGGIA G DR++ +LL A+++REV  FP + +
Sbjct: 569 VLGADITK------FSHLLKALRTGAPPHGGIALGFDRMMAILLSARSLREVIAFPKAFS 622

Query: 568 FCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
             DL   +PS +S + L + GL+++  P   L
Sbjct: 623 GRDLTCEAPSAISDKDLADYGLKLIAQPDTKL 654


>gi|198474023|ref|XP_001356528.2| GA16436 [Drosophila pseudoobscura pseudoobscura]
 gi|198138214|gb|EAL33592.2| GA16436 [Drosophila pseudoobscura pseudoobscura]
          Length = 1106

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 197/618 (31%), Positives = 314/618 (50%), Gaps = 64/618 (10%)

Query: 5    RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62
            RTH+CG+L  +++   V + GW+   R +    F  +RD YG TQV+  P +   E    
Sbjct: 421  RTHNCGELTSNEINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLLPKTKGLEEYSE 477

Query: 63   KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121
              V  E ++ ++G V+ R   T+N  + TG +E+ A  + +L+ +++ LP  +       
Sbjct: 478  TGVPIESIVRVEGTVIPRPGATVNPKMSTGHVEVEADTVLVLNPSKKNLPFEIRKFNRAG 537

Query: 122  ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
            E +R  +R+LDLR + +  N+  R+ +I  MR  ++    F+E  TP L   +P GA++F
Sbjct: 538  ERLRLTHRYLDLRFNDMQHNLRLRSSVIMKMREYLVNYLGFVEVETPTLFRRTPGGAQEF 597

Query: 181  LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 598  VVPTR-KAGHFYSLVQSPQQFKQMLMSGGVDRYFQVARCYRDEATRPDRQP-EFTQLDIE 655

Query: 241  MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            +SF  +D I+  +E  LR  +    +   +   F RI Y++A+ +YG DKPD R   +++
Sbjct: 656  LSFTSRDGIMQLIEETLR--YSWPKHLPKLQTPFRRITYEEALEKYGNDKPDTRFGFLLN 713

Query: 301  NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE--W---ARSQ---- 351
            NV+E        +  K       YE       GG    A   R +E  W   AR      
Sbjct: 714  NVSE--------IIDKSEEYKGKYE-------GGLAAYAIVVRASEAFWNGAARKHYEGL 758

Query: 352  GQPGLAYIFWRLDESGNVAGMGP-------VAKHLNIVNTEAIRVRLDMQDGDSCFFIAG 404
            G+  +  +F R          GP       + K L       I  + D+++ D  F   G
Sbjct: 759  GKDFIGTLFVR--------KFGPATDVQDRLGKLLGEQVANEITEKFDLEENDLLFLGIG 810

Query: 405  DPLKFCSFAA----DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
              ++  +       D  + + + + +   N + F W++DFP +E N E  +++  H+PFT
Sbjct: 811  PKVETRALLGRIRLDYHDFLVENVKMKKPNDYRFLWVIDFPLFERNRETNQLESVHHPFT 870

Query: 461  MPQGGMESLKG-----NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
             P   ++ L        +L +I++  YDLV NG E+  G IR H  +  +Q F    I K
Sbjct: 871  QPH--IDDLDNFATSCENLENIRSQAYDLVLNGQEVGGGSIRIHDRD--MQQFILEQILK 926

Query: 516  EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
             +       L  A + G PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +
Sbjct: 927  -IPHEHLSHLLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNA 985

Query: 576  PSTVSVEQLRELGLRIVE 593
            P  +S E ++   L ++E
Sbjct: 986  PVPISEEDMKLYHLSVLE 1003



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 4/101 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 249 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLIDTFMS 304

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105
              + VL + G V+ R    IN    TG++E+S   ++IL+
Sbjct: 305 TPDQTVLQVVGKVLGRPKANINLKYDTGEVEVSVTSVKILN 345


>gi|294635827|ref|ZP_06714283.1| aspartate--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291090839|gb|EFE23400.1| aspartate--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 440

 Score =  286 bits (733), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 167/434 (38%), Positives = 251/434 (57%), Gaps = 10/434 (2%)

Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
           F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CF
Sbjct: 6   FLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCF 65

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
           RDED R+DR P EF Q+D+E SF+  + +   ME + R ++ E    +    +F  + + 
Sbjct: 66  RDEDLRADRQP-EFTQIDVETSFMSAEQVREIMEELARALWLEIKGVDL--GDFPVMTFA 122

Query: 281 DAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRA 339
           +A+RR+G+DKPDLRNP+ + +V +   + +F+VFS   +   G  V A+   GG    R 
Sbjct: 123 EAMRRFGSDKPDLRNPLELVDVADLVKNVDFKVFSGPANDAKG-RVIALRVPGGASLTRK 181

Query: 340 FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC 399
             D   ++    G  GLA++      +G      P+AK LN    E I  R   + GD  
Sbjct: 182 NIDEYGQFVGIYGAKGLAWMKVNDRAAGMDGVQSPIAKFLNAEVLEGILARCAAESGDII 241

Query: 400 FFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
           FF A D  K  + A  A R  + ++L + +   +   W++DFP +E  + E  +   H+P
Sbjct: 242 FFGA-DSAKVATDAMGALRLKVGRDLKLTDETRWAPLWVIDFPMFE-EDGEGGLAAMHHP 299

Query: 459 FTMPQG-GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           FT P+    E+LK N + +I A  YD+V NG+E+  G +R H   +    F  +GI+++ 
Sbjct: 300 FTSPRDISPEALKANPVGAI-ANAYDMVMNGYEVGGGSVRIHNGAMQSAVFDILGINEQE 358

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
              +FG L  A + G PPH G+A G+DR+VMLL G +N+R+V  FP +      L  +PS
Sbjct: 359 QREKFGFLLDALKYGTPPHAGLAFGLDRLVMLLTGTENIRDVIAFPKTTAAACPLTDAPS 418

Query: 578 TVSVEQLRELGLRI 591
             +   L+EL + +
Sbjct: 419 RANPAALQELSIAV 432


>gi|324508809|gb|ADY43716.1| Aspartyl-tRNA synthetase [Ascaris suum]
          Length = 617

 Score =  286 bits (733), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 199/602 (33%), Positives = 302/602 (50%), Gaps = 45/602 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAK 63
           RTH+CG+L +   G    + GW+   R +    FL +RD YG  QV +        E A 
Sbjct: 30  RTHTCGELRIHHKGHTATIFGWLSFKRMNR---FLVLRDAYGSVQVRIPESRKDLLEAAD 86

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
               E  L + G+V  R +   N N+ TG IE+    +E+L+ A  +LP  +  E E  E
Sbjct: 87  KANYESALKVTGVVADRGSNR-NPNMKTGDIEIVVDDLEVLNNAPNQLPYSLRTESESIE 145

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDFL 181
             R +YR+LDLR + + + +  R+ + + MR  +I   NF+E  TP L   +P GA +F+
Sbjct: 146 ETRLRYRYLDLRSNRMQQALRLRSEVAHLMRKFLIEIANFVEVETPTLFRRTPGGASEFI 205

Query: 182 VPS-RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           VP+ + N G FY+LPQ+PQQ+KQLLM  G DRY+QIA C+RDE  + DR P EF Q+D+E
Sbjct: 206 VPAPKPNLGKFYSLPQSPQQFKQLLMCGGLDRYYQIARCYRDEGSKLDRQP-EFTQVDVE 264

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF  Q+D++  +E+++   + +       S  F R+ + +A R YG DKPDLR P  + 
Sbjct: 265 LSFTTQNDVMQLIEDLIIQSWPKELKNMMPSAPFKRLSFAEAYRLYGIDKPDLRIPWTIV 324

Query: 301 NVTEHFV---HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           + TE  +    S    F   L +  G     +  +    NRA      EW R        
Sbjct: 325 DCTERLMFLNSSNVEKFVARLFIGKG-----LAKRITRANRA------EWKR-------- 365

Query: 358 YIFWRLDESGNVAGMGPVAKH--LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
                ++  G   G+   ++      ++   +     +++ D+     GD          
Sbjct: 366 --LIEMNIKGQKFGIFTTSQKAWFKQISNAQLMEEYHIEEEDAVVVSWGDDKGVQWTLGQ 423

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL--KGND 473
            R+ IA++ G+     F+F WI DFP +  N ++ +++ AH+PFT P    E L  + + 
Sbjct: 424 LRHLIAEKAGLRATPRFDFVWITDFPLFIRN-DDGQLESAHHPFTAPIPEHERLIFEPDQ 482

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           + +I A  YDLV NG E+  G IR H + V  Q +    I  E  EN    L  A   G 
Sbjct: 483 IENITAQHYDLVLNGVELGGGSIRIHNANV--QRYVIERILGESAEN-LNHLLEALSFGA 539

Query: 534 PPHGGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGG A G+DR + LLLG  +    +R+V  FP S+   DL+   P+    EQL+  G+
Sbjct: 540 PPHGGFALGLDRYIALLLGKGDSSVGIRDVIAFPKSKEGRDLMSDCPAEPLEEQLQRYGI 599

Query: 590 RI 591
            +
Sbjct: 600 SV 601


>gi|189237891|ref|XP_966901.2| PREDICTED: similar to aspartyl-tRNA synthetase [Tribolium castaneum]
          Length = 1516

 Score =  286 bits (731), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 190/591 (32%), Positives = 303/591 (51%), Gaps = 34/591 (5%)

Query: 5    RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAK 63
            RTH+CG+L + +VG  V L GW+   R +    F  +RD YG TQ+ V   D+   ++ +
Sbjct: 941  RTHTCGELRIDNVGQRVVLCGWLEFQRMNK---FAVLRDSYGATQLLVPEEDTKTQKLLQ 997

Query: 64   SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122
            ++  E ++ + G V+SR  +  N    TG IE+  +   +L+ A++ LP  +    +  E
Sbjct: 998  NLPFESIIQVKGTVLSRPTDMKNKKQPTGDIEIFIEHFTVLNKAKDSLPFHIREHHKAKE 1057

Query: 123  SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181
            ++R +YR+LDLR   + +N+  R+ ++  MR  ++  + F++  TP L  ++P GA++F+
Sbjct: 1058 ALRMQYRYLDLRYPLMQRNLRVRSEMLMKMREFLVNHSGFVDVETPTLFKATPGGAQEFI 1117

Query: 182  VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
            VP+R   G FY+L Q+PQQ+KQ+LMA   DRYFQIA C+RDE  R DR P EF QLD+EM
Sbjct: 1118 VPTRF-PGQFYSLVQSPQQFKQMLMAGAVDRYFQIARCYRDEGARPDRQP-EFTQLDIEM 1175

Query: 242  SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
            SF + D+IL  +E +L   +  F     +   F R+ + +A+  YG+D+PD R    + N
Sbjct: 1176 SFTDLDNILQLVEELLGHAWPPFL--GPLPKKFQRMGFGEAMELYGSDQPDTRFGFKLEN 1233

Query: 302  VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
             TE    +E      I S + G      P +    N+   + + +   S+  P + ++  
Sbjct: 1234 CTELLKLNE----KFINSDDFGAYCIVFPKEYANLNKGVKENLEKI--SKQFPLVKFV-- 1285

Query: 362  RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC--FFIAGDPLKFCSFAADAR-- 417
                   VA  G +A  L  +  + +  +L     D C  F   G+  +  S     R  
Sbjct: 1286 ----QTKVATPGELAPKLGKLLGDNVAAKLANHVSDDCVLFLGFGNKKQTQSLMGKVRLE 1341

Query: 418  --NHIAQELGI-INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
              NH+ Q LG+ +        W++D P +E  E    +  AH+PFT P      L     
Sbjct: 1342 YANHLEQ-LGVSVRAKGMHLLWVVDMPLFEPGESPGSLQSAHHPFTAPNPDDLLLLDTAP 1400

Query: 475  LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            L +++  +DLV NG EI  G +R H  ++  + F  + I K    N    +      G P
Sbjct: 1401 LQVRSLSFDLVLNGNEIGGGSVRIHDPDLQEKIFRMLNIDK----NSMQHIIDMLSSGCP 1456

Query: 535  PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
            PHGGIA G+DR++  +L   ++R+V  FP +    D L G+PS VS   L+
Sbjct: 1457 PHGGIALGLDRLMSKILNTASIRDVIAFPKTFEGRDPLSGAPSAVSDADLK 1507


>gi|330844656|ref|XP_003294234.1| hypothetical protein DICPUDRAFT_159202 [Dictyostelium purpureum]
 gi|325075342|gb|EGC29242.1| hypothetical protein DICPUDRAFT_159202 [Dictyostelium purpureum]
          Length = 1269

 Score =  285 bits (729), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 191/587 (32%), Positives = 283/587 (48%), Gaps = 84/587 (14%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFEI 61
           R+++CGDL  +D+G  V + GW++  R  G  +F+ IRD +G  QV+ N    +S    I
Sbjct: 74  RSNTCGDLNKNDIGKEVLIYGWINSFRKFGDQVFMVIRDGHGKVQVIINLNESNSNSKNI 133

Query: 62  AKSV-----------------------RSEWVLCIDGLVMSRSAETINANIITGQIELSA 98
            K++                       + E ++ I G V+ R  + IN  + TG+IE+ A
Sbjct: 134 IKTILKSSVPNIDIDSNKSIEENIKLFKLESIVSIRGKVIGRPDDMINQKMKTGEIEIEA 193

Query: 99  QKIEILSVAEELPLPVFGEREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157
            +I++L+   +LP  V  +     E +R  YR++DLRRD +  NI  R+R+  + R  ++
Sbjct: 194 SEIQLLNNCADLPFTVEHDGVLASEELRLTYRYVDLRRDQVQSNIRLRSRLSMAARNYLV 253

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
            ++FIE  TP L   +PEGAR++LVP+R N G FY+LPQ+PQQYKQLLM  G DRYFQ+A
Sbjct: 254 GQDFIEVETPTLFRPTPEGAREYLVPTR-NHGQFYSLPQSPQQYKQLLMVGGVDRYFQLA 312

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
            C+RDED RSDR P EF Q+DME+SFV  + I   +E +L+ +++E   G  +   F   
Sbjct: 313 RCYRDEDLRSDRQP-EFTQIDMELSFVNCEMIYTIIEGLLKKLWKE--AGFNIDYKFPFY 369

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV----FSKILSVNPGYEVWAI---- 329
            Y+  + RYG DKPD R    +   +  F  S+  +     SK+L      E+  +    
Sbjct: 370 TYEQVLSRYGIDKPDTR--YALAEPSNSFKESKPMIKCIKLSKVLPTLSKSELEQLVNDS 427

Query: 330 -----PAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
                 A  G  + A   +  EW                           ++K L+    
Sbjct: 428 KFLVKEAPHGVVSVAINKKDGEWKSR------------------------ISKFLSEKEK 463

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI-----INCNCFEFCWIMD 439
           + +  R+D++DGD     AG      S     R   AQ L       I+   F F W++D
Sbjct: 464 QQLVERMDIEDGDVLLIAAGPRCNVESLLGKVRIQSAQLLKKKKLLEIDDKQFNFLWVVD 523

Query: 440 FPFY---EWNEEEKKIDFAHNPFTMPQGG------MESLKGNDLLSIKAFQYDLVCNGFE 490
           FP +    +  E   +   H+PFT P          E+ K +D   I+   YD+V NG E
Sbjct: 524 FPLFTPESYLNENSPLLSTHHPFTAPHPEDIDILLNENSKPSDYSKIRGLHYDIVLNGVE 583

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +  G IR H  +V L+    V      + NRF  L  A   G PPHG
Sbjct: 584 MGGGSIRIHNQDVQLKVLEKVLRLPPHLSNRFSHLINALAMGCPPHG 630


>gi|302833734|ref|XP_002948430.1| hypothetical protein VOLCADRAFT_58252 [Volvox carteri f.
           nagariensis]
 gi|300266117|gb|EFJ50305.1| hypothetical protein VOLCADRAFT_58252 [Volvox carteri f.
           nagariensis]
          Length = 601

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 197/615 (32%), Positives = 309/615 (50%), Gaps = 56/615 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H CG + V+D+GS + + GWV R R  GG+ F D+RDH G+ QV+  P S   E++++
Sbjct: 10  RSHGCGAVTVNDIGSRITVCGWVDRNRDMGGVQFFDVRDHSGLLQVMCEPQSVPPEVSRT 69

Query: 65  ---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPV--FGER 118
              +R+E+V+C+ G++ +R  +  N  I TGQ+EL A+ ++IL+V    LP P+    E+
Sbjct: 70  ASRLRNEYVVCVRGVLRAR--KDPNPRIPTGQLELLAESVDILNVVTRPLPFPISEAEEQ 127

Query: 119 EYP-ESIRFKYRFLDLR--------------RDTLHKNIVKRTRIINSMRCRMIAENFIE 163
           E P E  R K R LDLR              R  L         +  S+R   +  N + 
Sbjct: 128 EPPREDTRLKNRVLDLRWEGGESWLRAGGEGRGVLLPLPPLTLNLPLSVRTAAVYNNPLP 187

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
                    S           RV  G +YALPQ+PQ +KQ+LM +G DRY+QIA CFRDE
Sbjct: 188 LPPLHFPPLS-----------RVQPGEWYALPQSPQLFKQMLMVAGMDRYYQIARCFRDE 236

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
           D R+DR P EF QLD+E++F++   +   ME ++  +F++   G  ++  F R+ Y +A+
Sbjct: 237 DLRADRQP-EFTQLDLEVAFMDDVALQGLMEQLVAQIFKQLL-GVALTTPFRRMSYAEAM 294

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN---RAF 340
            +YG+DKPDLR  +   N++E      F+VFS  ++     +   +P      N   +  
Sbjct: 295 DKYGSDKPDLRYGLEFVNLSEVVRECGFKVFSGAVADGGVVKAIRVPDGKRISNTRIKPR 354

Query: 341 CDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCF 400
            D  NE A + G  GLA I  R+   G++     + + L+    E +        GD   
Sbjct: 355 GDIANE-AVAAGSAGLASI--RVSADGSLDAAKAIKEGLSGQQAEQLLRETGAGPGDLLL 411

Query: 401 FIAGDPLKFCSFAAD-ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF 459
             AG P    + A D  R  + +ELG+I        W++DFP +E+N EEK+      P 
Sbjct: 412 LAAG-PTDVVNRALDRVRQLLGKELGLIKPGDHSLLWVVDFPMFEYNPEEKRYQVGGGPG 470

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
                G+       +         L            R +  ++  + F  +G++    +
Sbjct: 471 GGGVPGVRGGGVPGVRGGGIGGGSL------------RIYRRDIQQKVFELIGLNPAEAQ 518

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
           ++FG L   F+ G PPHGG+A G+DR+ MLL GA ++R+V  FP +      L G+P+ V
Sbjct: 519 SKFGYLLDCFEYGAPPHGGLAFGLDRLAMLLAGAPSIRDVIAFPKTAQAQCALTGAPAPV 578

Query: 580 SVEQLRELGLRIVEN 594
           + +QL EL + +V +
Sbjct: 579 ADKQLHELHVAVVSS 593


>gi|158297420|ref|XP_317655.3| AGAP007844-PA [Anopheles gambiae str. PEST]
 gi|157015186|gb|EAA12212.3| AGAP007844-PA [Anopheles gambiae str. PEST]
          Length = 600

 Score =  284 bits (726), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 194/617 (31%), Positives = 305/617 (49%), Gaps = 59/617 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAK 63
           R+H+CG+L +S VG  V L GW+   R +    F  +RD YG  Q ++    S  F +  
Sbjct: 15  RSHNCGELRLSHVGQKVTLCGWLEFSRMNK---FFTLRDGYGTVQALLPEAVSEGFSL-D 70

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122
            +  E +L + G V  R     N    TG+IE+    +E+L+ A++ LP+ V       E
Sbjct: 71  GLAFESILRVTGTVQPRPEGQANRTNPTGEIEIHVSGLEVLNEAKKRLPINVKDYNRAKE 130

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFL 181
           ++R ++R++DLR   L  N+  R++II  MR  MI +  F+E  TP L   +P GA++F+
Sbjct: 131 NLRLEHRYIDLRNRDLQHNLRLRSQIIMRMRECMINDYGFVEVETPTLFRRTPGGAQEFV 190

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FY+L Q+PQQ+KQ+LM    DRYFQIA C+RDE  R DR P EF QLD+E+
Sbjct: 191 VPSR-KPGHFYSLVQSPQQFKQMLMVGAIDRYFQIARCYRDESTRPDRQP-EFTQLDIEL 248

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF +++ ++  +E VL   +    + N +   F R+   +A+ R+G+DKPD R    + N
Sbjct: 249 SFTDRESVIQLIEQVLTKSWP--YSENPIRAPFPRMTLAEAMERFGSDKPDTRFGYELQN 306

Query: 302 VTEHF----------VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           VT+               +FRV+  ++      E   +P             + E A+  
Sbjct: 307 VTKTLGAGLTMPAGVRQQDFRVYGVVVRAE---EARKLPT-------GLKKSLEEIAKQS 356

Query: 352 GQPGLAYIFWRLDESGNVA--GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP--- 406
                   F +  +S        GP+ + L   + +A+  +L +Q  D      G     
Sbjct: 357 N-------FCKFTQSKVTPEWSSGPIQRLLGKESADALSEQLSLQPDDLLLLGWGKQTYV 409

Query: 407 ------LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
                 ++  ++ A    ++A +      +   F W++DFP +  NEE  +I+  H+PFT
Sbjct: 410 QNLMGRIRLATYEALEERNLAPKR---QSHAHNFLWVVDFPMFSENEETGQIESTHHPFT 466

Query: 461 MPQ----GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
            P       +      ++  I++  YDLV NG EI  G IR H S++      +V    +
Sbjct: 467 APHPEDAAALSDGCTENIYKIRSLAYDLVWNGVEIGGGSIRIHNSQLQRTVLKDV---LK 523

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
           +       L  A + G PPHGG A G+DR V LL  A ++R+V  FP S +  D L  +P
Sbjct: 524 IEHAHLHHLLDALESGAPPHGGFAIGLDRYVALLCNAPSIRDVIAFPKSADGKDPLSKAP 583

Query: 577 STVSVEQLRELGLRIVE 593
             +S E+ R   +++VE
Sbjct: 584 VPISEEEKRIYHIQVVE 600


>gi|32566633|ref|NP_506019.2| aspartyl(D) tRNA Synthetase family member (drs-2) [Caenorhabditis
           elegans]
 gi|24817292|emb|CAB04081.2| C. elegans protein F10C2.6, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 593

 Score =  282 bits (722), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 196/603 (32%), Positives = 303/603 (50%), Gaps = 49/603 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH C +L  S+    V + GW+   R      F  +RD YG  Q   +  S    + K 
Sbjct: 24  RTHICDELSTSNKNEKVSVMGWLSHKRMDR---FFVLRDAYGSVQAKISASSKLQSLLKD 80

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E V+ +DG+V+ R  +  N+ + TG IE+  +++ +L+ A    +P+  +    E  
Sbjct: 81  IPYESVVRVDGIVVDR-GDNRNSKMKTGDIEIDVEELTVLNKATS-NIPMLPDANANERT 138

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVP 183
           R KYR++DLR D L K++  R+  ++++R  ++ ++ F++  TP L   +P GA +F+VP
Sbjct: 139 RLKYRYIDLRSDKLQKSLRLRSEFVHNVRRFLVEKSGFVDVETPTLFRRTPGGAAEFVVP 198

Query: 184 S-RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           +   NQG  Y+LPQ+PQQ+KQLLM    DRYFQIA C+RDE  + DR P EF Q+D+EMS
Sbjct: 199 APSPNQGLAYSLPQSPQQFKQLLMVGAIDRYFQIARCYRDEGSKGDRQP-EFTQVDVEMS 257

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+ ++  +E+++   + E  N     + F RI Y DA+R YG DKPD+R P  + +V
Sbjct: 258 FTTQNGVMQLIEDMIISAWPESLNHIKPKSPFPRIPYSDAMRLYGIDKPDMRIPWQIDDV 317

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
                   F    K +  +  +    +  +G G         NEW R            +
Sbjct: 318 DNDI----FEFLQKDID-DDTWRSRILVCRGAGKTTISNSMKNEWKR----------LIQ 362

Query: 363 LDESG-NVAGMGPVAKHL--NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           ++E+G N A   P  K       N + I         D    I  D L  C   ++    
Sbjct: 363 MNENGKNFAICHPSQKRWFKPFDNQKLI---------DQFGLIDEDVLIVCWGNSEGVYW 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGND---LL 475
             +  G+ + +     WI+DFP + +  EE ++   H+PFT P +  ++ L  ND   LL
Sbjct: 414 TLEVCGLRSKSNVTAHWIVDFPLFSF--EEGQLVSTHHPFTAPLEKDIDILYSNDIDKLL 471

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            I    YDLV NG E+  G IR   SE+       +G   + +E+    L  A   G PP
Sbjct: 472 QITGQHYDLVINGVEMGGGSIRIENSEIQRHVLKVLGEPTDEMEH----LLNALSHGAPP 527

Query: 536 HGGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG A G+DR V +L    N    VR+V  FP ++N  DL+  +P+T+S +QL   G+ +
Sbjct: 528 HGGFALGLDRFVAMLTSDGNPLTPVRDVIAFPKTKNGKDLMSDAPATLSQKQLERYGISL 587

Query: 592 VEN 594
           + N
Sbjct: 588 LPN 590


>gi|326910915|ref|NP_001192099.1| aspartyl-tRNA synthetase, mitochondrial [Acyrthosiphon pisum]
 gi|328698565|ref|XP_003240672.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Acyrthosiphon
           pisum]
          Length = 645

 Score =  282 bits (722), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 190/599 (31%), Positives = 307/599 (51%), Gaps = 43/599 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           ++  RTH+C  L   D G  V L GW+  VR +  II   +RD YG TQ+V  P++A  E
Sbjct: 76  LYTSRTHTCDQLRNEDCGKSVILCGWLEYVRLNRFII---LRDGYGSTQLVI-PENASTE 131

Query: 61  I---AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFG 116
           +    K +  E VL   G V  R    IN +  TG IE+   ++ +L +V  +LP  +  
Sbjct: 132 LNDFIKQIPLESVLMCYGSVKLRPVGEINKDQSTGMIEVIVDQLLLLNAVDTKLPFQLRK 191

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPE 175
             +  ES+R KYR+LDLR   +  N+  R++++  MR  +I    F+E  TP L   +  
Sbjct: 192 FNKANESLRLKYRYLDLRYPEMQYNLRLRSKLLMKMREFLINHREFVEVETPTLFKKTHG 251

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GA++F+VP+   +G  Y+L Q+PQQ KQ+LM    DRYFQ+A C+RDE  +SDR P EF 
Sbjct: 252 GAQEFIVPTH-EKGKCYSLVQSPQQLKQMLMVGSMDRYFQVAKCYRDEGAKSDRQP-EFT 309

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           QLD+EMSF  QD ++  +E +L  V+   S    +   F R+ Y++A+  YG+DKPD+  
Sbjct: 310 QLDIEMSFTNQDGVMLLIEELLSFVWP--SELGKIKIPFPRLSYEEAMVTYGSDKPDIGR 367

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA--RSQGQ 353
              + N T++  ++   VF+ +L                  ++    ++N+     S   
Sbjct: 368 STKISNWTKYIPNATNEVFALVLK--------------NAEDKLTKKQINDLKILISTNY 413

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
           P + +    +           + K +N ++  A+    ++ + D     +G   K  S  
Sbjct: 414 PDVKFSLLNIRSVETFK--ENIKKIINGIDVAAMLAADNISEHDLVAIASGSKYKSLSVL 471

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                H   +    + + + F WI++FP +E +  +  I   H+PFT PQ  + S   ++
Sbjct: 472 GKINEHFKVDNS--SDDRWRFVWIINFPLFEMDSNQ--IQSVHHPFTQPQTEITS---DN 524

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLYRAFQCG 532
           LL +K F YDLV NG E+  G IR H + +  +   ++  I  E + +    L  A + G
Sbjct: 525 LLEVKGFHYDLVLNGSEVGGGSIRIHDANLQTKVIGSILNIPIETMSH----LVEALKSG 580

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            PPHGGIA G+DR++ +L    ++R+V  FP +    DLL G+P+ ++ E ++   L+I
Sbjct: 581 CPPHGGIALGVDRLLSILCNTNSIRDVIAFPKTFEGKDLLSGAPTEITTEDMKRYHLKI 639


>gi|116620658|ref|YP_822814.1| aspartyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|116223820|gb|ABJ82529.1| aspartyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 591

 Score =  281 bits (719), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 144/300 (48%), Positives = 201/300 (67%), Gaps = 6/300 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RTH CG+L  S+ G  V L GW HR R HG +IF+D+RD  G TQ +   + D A  + A
Sbjct: 15  RTHMCGELRASNAGQKVLLMGWAHRRRDHGAVIFVDMRDRTGHTQAIFHEDVDPAIHKRA 74

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+V+ ++G+V  RSA T+N N+ TG++E+ A KI IL+ +   P P+    +  E
Sbjct: 75  EEVRAEYVIAVEGVVSLRSAATVNPNMPTGEVEVVASKIWILNESRTPPFPMEEHVDVAE 134

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR++DLRR  + +N++ R++I  ++R  + +E F+E  TP +T S+PEGARD+LV
Sbjct: 135 DVRLKYRYVDLRRPQMQRNVIMRSQISFAVREFLYSEGFLEIETPFMTRSTPEGARDYLV 194

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ +KQLLM SGF++YFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 195 PSRVQPGTFYALPQSPQIFKQLLMISGFEKYFQIVRCFRDEDLRADRQP-EFTQIDLEMS 253

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +Q  I   +E +++ V +    G  V   F RI Y +A+R YG DKPD R P  MH V
Sbjct: 254 FPQQAQIFAVIEPLIQKVCK--VAGFDVPATFPRITYAEAMRNYGIDKPDTRIP-PMHPV 310



 Score =  144 bits (363), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 69/164 (42%), Positives = 97/164 (59%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           +++   F+F W++DFP +EWNEE+ +   AH+PFT        L   D    +A  YDLV
Sbjct: 424 LLDPKNFQFLWVVDFPMFEWNEEDNRWVAAHHPFTSVHDEDIDLLTADPAKCRAKSYDLV 483

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
            NG E+ SG IR H  +V  + F+ VG S +    RFG L  A + G PPHGGIA G+DR
Sbjct: 484 LNGVELGSGSIRIHRRDVQAKVFAAVGFSDDEARRRFGYLLEALEYGAPPHGGIALGLDR 543

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           +VM+L G  ++REV  FP +    DL+  +P+ V    L+ELG+
Sbjct: 544 LVMILAGETSIREVIPFPKTARGTDLMSDAPAPVPDRALKELGI 587


>gi|307138530|ref|ZP_07497886.1| aspartyl-tRNA synthetase [Escherichia coli H736]
 gi|331642481|ref|ZP_08343616.1| aspartate--tRNA ligase [Escherichia coli H736]
 gi|331039279|gb|EGI11499.1| aspartate--tRNA ligase [Escherichia coli H736]
          Length = 377

 Score =  280 bits (716), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 159/378 (42%), Positives = 225/378 (59%), Gaps = 8/378 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF VF+   + +P   V A+   GG    R   D    + +  G  GLAYI   
Sbjct: 297 DLLKSVEFAVFAGPAN-DPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVN 355

Query: 363 LDESGNVAGMGPVAKHLN 380
               G      PVAK LN
Sbjct: 356 ERAKGLEGINSPVAKFLN 373


>gi|321310937|ref|YP_004193266.1| aspartyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319802781|emb|CBY93427.1| aspartyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 556

 Score =  279 bits (714), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 188/574 (32%), Positives = 301/574 (52%), Gaps = 45/574 (7%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           S   ++G++   +  G ++F +I D  G  QV+   + A  E+ K ++ E VL ++G++ 
Sbjct: 15  SVWHIAGFLRVSKSLGKLLFTNIEDVSGSIQVLFKGEQAQ-ELLK-IKRESVLSVEGILK 72

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP-ESIRFKYRFLDLRRD 136
            R  ++IN +I  G+ EL A+K E+LS A + LP  +    + P E+ R KYR+LD+RR+
Sbjct: 73  KR--KSINPSIPLGEWELIAEKYEVLSEARKVLPFELTSASDRPQEATRLKYRYLDIRRE 130

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-RVNQGSFYALP 195
            +  N++ ++ I+   R  ++ ENF+E  TP L+ SS EGA  F     R  + + ++L 
Sbjct: 131 -VKANLISKSEILRIFRDHLVHENFMEVFTPSLSISSQEGANTFDTRVLREKKEAIFSLS 189

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ YKQLLM  G +RYFQIA CFR ED R+DR   EF+Q+D+EM+F  Q+ + + +E 
Sbjct: 190 QSPQLYKQLLMIGGLERYFQIANCFRLEDLRADR-QYEFFQIDIEMAFSNQEKLFSIIET 248

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
            L  ++ +F     +   F RI YD+A++RYG+DKPDLR   ++ +++ H     F+  S
Sbjct: 249 ALSKIWSQFKKSE-LPTPFPRISYDEALKRYGSDKPDLRYEFLIDDLSSH-----FKELS 302

Query: 316 KILSVN-------PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           K    +       P  E++ +  K              W  S       YI    D  G 
Sbjct: 303 KANGHDEAHGLFIPDIEIFQVEEK--------------WINSIITKNNIYILKIQD--GK 346

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL---KFCSFAADARNHIAQELG 425
           V     +      ++   +   L  ++G +   +  D L      +     R H ++   
Sbjct: 347 VMRSSLMNMSYEDISIPEVSCPLSYKNG-TLILVTCDELTRKNALTSLGSLRMHFSKRPK 405

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
                 ++F WI+D+P +E+NE + K   AH+ FT P  G     G D+   ++  YDLV
Sbjct: 406 AQLEQEYKFAWIVDWPLFEYNELQGKWVVAHHLFTKPASGS---VGFDIKGERSMGYDLV 462

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
            NG E+ASG  RN+  +V    FS  G+S + +E+ FG    AF  G+PPH GIA G+DR
Sbjct: 463 LNGVELASGSERNNDLDVQNYIFSLAGLSTQEIEDNFGWFLEAFNYGVPPHMGIAIGVDR 522

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
           +V ++LG  ++REV  FP + +    L  +P  +
Sbjct: 523 LVQMILGVSSIREVIAFPKNNHGICPLTNAPKLL 556


>gi|330975332|gb|EGH75398.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 289

 Score =  279 bits (713), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 140/290 (48%), Positives = 198/290 (68%), Gaps = 4/290 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDL
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDL 289


>gi|114565514|ref|XP_001149965.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 2
           [Pan troglodytes]
          Length = 590

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 188/552 (34%), Positives = 290/552 (52%), Gaps = 31/552 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  + 
Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMK 340

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           + ++++ F ++E       LS   G  +   IP       R   + + ++A       + 
Sbjct: 341 IIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQEIL 400

Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +F   + + N     PVA   +     E IR+ ++ Q+ D     AG+  K CS     
Sbjct: 401 PVFLNANRNWN----SPVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKL 455

Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470
           R   A  L   G++  +   F F W++DFP +   EE  ++++ AH+PFT P      L 
Sbjct: 456 RLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLL 515

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             +    ++  YDLV NG EI  G IR H +E  LQ +    + KE V+     L +A  
Sbjct: 516 YTEPKKARSQHYDLVLNGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALD 572

Query: 531 CGMPPHGGIAAG 542
            G PPHGGIA G
Sbjct: 573 YGAPPHGGIALG 584


>gi|157115821|ref|XP_001658298.1| aspartyl-tRNA synthetase [Aedes aegypti]
 gi|108883468|gb|EAT47693.1| aspartyl-tRNA synthetase [Aedes aegypti]
          Length = 600

 Score =  277 bits (709), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 190/612 (31%), Positives = 301/612 (49%), Gaps = 52/612 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-AK 63
           RTH+CG+L  S V   + + GW+   R +    F  +RD YG TQ+   PD    E+   
Sbjct: 16  RTHNCGELRTSHVDQEIVICGWLEFSRLNK---FFTLRDGYGSTQIFI-PDELAAEVNLN 71

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPE 122
           ++  E +L ++G V+ R     N  + TG++E+    +E+L+ A   LP+ +    +  E
Sbjct: 72  NIPFESILRVEGKVVKRPKGQENPRLPTGEVEVVLGNVEVLNKARNRLPIDIKEHNKAKE 131

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFL 181
           ++R ++R++DLR   L +++  R++II  MR  MI +  F+E  TP L   +P GA++F+
Sbjct: 132 NLRLEFRYIDLRSTQLQRSLRLRSQIIMKMREYMINQCGFVEVETPTLFRRTPGGAQEFV 191

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R   G FY+L Q+PQQ+KQ+LM+   DRYFQIA C+RDE  R DR P EF QLD+E+
Sbjct: 192 VPTR-KPGHFYSLVQSPQQFKQMLMSGAIDRYFQIARCYRDEATRPDRQP-EFTQLDIEL 249

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF ++D I+  +E VL   +    NG  +   F RI Y +A+ R+G DKPD R    + +
Sbjct: 250 SFTDRDKIMTLLEGVLASSWP--VNGEPLKVPFQRITYAEAMNRFGIDKPDTRFEYELQD 307

Query: 302 VTEHFVHSEFRVFSKILSVNPG---------YEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
           V  H            + +NP          +  +AI A+          +      S+ 
Sbjct: 308 VGGH------------IKLNPNLTRGLDEQIFGAYAIVARNPHSAAPTSLKKTLETVSKE 355

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV---RLDMQDGDSCFFIAGDPLKF 409
                ++   + ++   + +      +N++  E  R     L +Q GD      G  L+ 
Sbjct: 356 HKNCRFVLSAVTDNWLKSSI------VNLLGDEVARKLQNHLTLQPGDLLLLGFGSRLET 409

Query: 410 CSFAADARNHIAQELGIINCNCF------EFCWIMDFPFYEWNEEEKKIDFAHNPFTM-- 461
            +     R      L   N          +F W+ DFP +  NEE   ++  H+PFT   
Sbjct: 410 QNLMGRIRLAFYDSLESRNLVPLRSSTDQKFLWVYDFPMFAPNEETGHLESVHHPFTAPH 469

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P+   +  +  DL  I++  +DLV NG EI  G +R H   +       V    ++    
Sbjct: 470 PEDFPKLHEKTDLQVIRSQSFDLVWNGVEIGGGSVRIHDGALQKMVLDEV---LQIEHAH 526

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
              L  A +CG PPHGG A G+DR + LL  A ++R+V  FP S +  D L  +P  +S 
Sbjct: 527 LQHLLDALECGCPPHGGFAVGLDRYIALLCSAPSIRDVIAFPKSSDGKDPLSKAPVPISE 586

Query: 582 EQLRELGLRIVE 593
           E+ +   +R V+
Sbjct: 587 EEKKLYHIRTVD 598


>gi|13507785|ref|NP_109734.1| aspartyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2500968|sp|P75068|SYD_MYCPN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|1673765|gb|AAB95756.1| aspartyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|301633248|gb|ADK86802.1| aspartate--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 557

 Score =  276 bits (707), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 174/577 (30%), Positives = 289/577 (50%), Gaps = 45/577 (7%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+L    +   V ++GWV R++  G + F+ + D     QV         E  K +  E
Sbjct: 15  IGNLTSEHLNKTVTIAGWVKRIKKLGELNFVIVGDKTNTIQVTCKNK----EQVKYLTRE 70

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G +           + + + E++   I + + ++  PL +  + +  E +R +Y
Sbjct: 71  DLVIVKGKL---------KRLDSVRFEITNPTITLFAKSKTPPLIIEDKTDALEEVRLRY 121

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR  + K +  R ++  ++R  +    FIE  TP LT S+PEGARDFLVP+R+ +
Sbjct: 122 RYLDLRRPVMQKRLALRHKVTLAVRNWLDQMGFIEVETPTLTKSTPEGARDFLVPARIRE 181

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            SFYALPQ+PQ YKQLLM  G ++YFQIA  +RDED R DR P E  Q+D+E++F  ++ 
Sbjct: 182 HSFYALPQSPQIYKQLLMVGGTEKYFQIAHVYRDEDSRKDRQP-EHTQIDLEVAFYTKEM 240

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           +++ ++ +   VF +  N   +   F  + + +A  R+G+DKPDLR    + + T+ F  
Sbjct: 241 VMDLIQRLFVDVFRQVLNIK-LKKPFPVLKFAEAFNRFGSDKPDLRYGFELEDCTDLFQD 299

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           S  + F+ +  +N G  V  I       +      + + A+  G                
Sbjct: 300 SPNQ-FTNL--INAGGIVGGIQLPNLYLDEVSFKALRKLAKDNG---------------- 340

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGII 427
                 V+         +++  LD+    +   +A         A  A RN +   L ++
Sbjct: 341 ------VSLEFYSDKASSLKQPLDLPLAGTILLVAHKSKTQAWTALGAIRNELKYHLNLV 394

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             N + FCWI+DFP YE++E+E+K   AHN F+ PQ        N      + QYDLV N
Sbjct: 395 KPNQYSFCWIVDFPLYEFDEKEQKWVSAHNMFSNPQPQWLVNFENHKAEALSEQYDLVLN 454

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           GFE+ SG IR H  EV  +   ++G+  +    +FG +  A+Q G P H G+  G+DR++
Sbjct: 455 GFELGSGSIRIHDPEVQTRLMQSLGVDPQ----QFGFVMEAYQYGAPVHAGMGLGLDRLM 510

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           M++    N+REV  FP +    ++   +P  V ++ +
Sbjct: 511 MIINNVDNIREVMAFPKNAQGIEMHTNAPDQVDIKDI 547


>gi|114565512|ref|XP_001150025.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 3
           [Pan troglodytes]
          Length = 608

 Score =  276 bits (705), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 191/601 (31%), Positives = 305/601 (50%), Gaps = 68/601 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  + 
Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMK 340

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           + ++++ F ++E       LS   G  +   IP       R   + + ++A       + 
Sbjct: 341 IIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQEIL 400

Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +F   + + N     PVA   +     E IR+ ++ Q+ D     AG+  K CS     
Sbjct: 401 PVFLNANRNWN----SPVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKL 455

Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470
           R   A  L   G++  +   F F W++DFP +   EE  ++++ AH+PFT P        
Sbjct: 456 RLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAP-------- 507

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
                                       H S++ L         KE V+     L +A  
Sbjct: 508 ----------------------------HPSDIHLLYTEP---KKEDVK-MLSHLLQALD 535

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR++ L+ G++++R+V  FP S    DL+  +P +V  E+L+   +R
Sbjct: 536 YGAPPHGGIALGLDRLICLVTGSRSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIR 595

Query: 591 I 591
           +
Sbjct: 596 V 596


>gi|308504263|ref|XP_003114315.1| CRE-DARS-2 protein [Caenorhabditis remanei]
 gi|308261700|gb|EFP05653.1| CRE-DARS-2 protein [Caenorhabditis remanei]
          Length = 637

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 189/607 (31%), Positives = 303/607 (49%), Gaps = 57/607 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+C +L  S+    V + GW+   R      F  +RD YG  Q     +S   ++ K 
Sbjct: 23  RSHTCDELNASNKNEKVSVMGWLSHKRMDR---FFVLRDAYGSVQAKIQENSELKQLLKE 79

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E V+ +DG V+ R  E  N  + TG IE++ +++ +L+ A  + +P+  + +  E  
Sbjct: 80  LPYESVIRVDGTVVDR-GENRNNKMKTGDIEINVEQLTVLNKAS-VNIPMLPDVKSNEKT 137

Query: 125 RFKYRFLDLRRD---------------TLHKNIVKRTRIINSMRCRMIAEN-FIECSTPI 168
           R KYR++DLR D               +L++ +  R+  ++++R  ++ ++ F++  TP 
Sbjct: 138 RLKYRYIDLRSDKLQRYRLQLEDDILVSLYRALRIRSEFVHNLRKFLVEKSGFVDVDTPT 197

Query: 169 LTASSPEGARDFLVPSRV-NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L   +P GA +F+VP+   N G  Y+LPQ+PQQ+KQLLM  G DRYFQIA C+RDE  + 
Sbjct: 198 LFRRTPGGATEFVVPAPPPNHGMAYSLPQSPQQFKQLLMVGGIDRYFQIARCYRDEGSKG 257

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
           DR P EF Q+D+EMSF  Q+ ++  +E+++   + E        + F RI Y +A+ +YG
Sbjct: 258 DRQP-EFTQVDVEMSFTTQEGVMQLIEDMILSAWPESLIHLKPKSPFPRISYSEAMTKYG 316

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
            DKPD+R    + +V  +  +         L  N G ++  I  +G G         +EW
Sbjct: 317 IDKPDMRVSWQIEDVKTNIFN--------FLKKNDGDKIRVIVCRGAGKTPISNSTKDEW 368

Query: 348 ARSQGQPGLAYIFWRLDESG-NVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGD 405
            R            +++E+G N A   P  K     +  E I     + + D+     G+
Sbjct: 369 KR----------LIQMNENGRNFAICHPSHKTWFKSLKNEKILEEFGLTEEDALVVCWGE 418

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
                      RN++A+  G+ + N     W++DFP + +  EE  +   H+PFT P   
Sbjct: 419 SDGVYWTLGQLRNYVAEICGLRSKNVVTAHWVVDFPLFSF--EEGHLVSTHHPFTAPVDK 476

Query: 466 MESL---KGND-LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
            + +   + ND LL I    YDLV NG E+  G IR   SE+       +    E +E+ 
Sbjct: 477 DKEMLYDEDNDRLLQITGQHYDLVINGVEMGGGSIRIENSEMQRHVLKILSEPTEEMEH- 535

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLLMGSPS 577
              L  A   G PPHGG A G+DR V +L    N    VR+V  FP ++N  DL+  +P+
Sbjct: 536 ---LLNALSHGAPPHGGFALGLDRFVAMLTSDGNPLTPVRDVIAFPKTKNGKDLMSDAPT 592

Query: 578 TVSVEQL 584
           T+S +QL
Sbjct: 593 TLSKKQL 599


>gi|300176712|emb|CBK24377.2| Aspartyl-tRNA synthetase [Blastocystis hominis]
          Length = 680

 Score =  273 bits (697), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 194/605 (32%), Positives = 302/605 (49%), Gaps = 44/605 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+ SC  L   ++  FV LSGWV  VR     +F+ +RD  G TQ + + D     + K 
Sbjct: 41  RSCSCNSLTKKNINEFVTLSGWVDSVRIMKDSVFIILRDGEGQTQTLFDCDKEVESLLKK 100

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E V+C++G V++R ++ INA + TG+IE+  +K+ +L+ A +LP P  G+    E +
Sbjct: 101 IPMESVVCVEGNVIARPSDAINARMNTGEIEVKGKKLYLLNQAVDLPFPYHGKLPKDEVL 160

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
             KYR L LR       I  R+  ++S+R  + + +F E  TP+LT SSPEGA +F VPS
Sbjct: 161 S-KYRHLTLRHPEYQNEIRFRSEFLHSLRLSLHSHHFTEVETPLLTRSSPEGAHEFYVPS 219

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
            +     +AL Q+PQQYKQ+LMASG DRYFQIA CFR+E  R DR   EF QLD+EM+++
Sbjct: 220 ALIPRGGFALSQSPQQYKQILMASGIDRYFQIARCFRNESGRKDR-QLEFTQLDIEMAYI 278

Query: 245 -EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            +  +I +T++N+L   F+     N VS  F  + YD  +  +G+DKPDLR P  + +++
Sbjct: 279 TDLSEIQSTIQNLLLSTFQTAGISNPVS--FRSLSYDACLSEFGSDKPDLRIPFRITSIS 336

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-------RAFCDRMNEWARSQGQ-PG 355
           +         F ++  +    ++  +      G        R    ++ +  + Q Q  G
Sbjct: 337 DDLQKIRVLRFPRLAPLVSASKLKQLLKSLEEGQFQKSRVIRVGASKLVDVEKIQSQLSG 396

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAA 414
           L           N   +  V +  N  N    ++   +    +  +  G   K +  F A
Sbjct: 397 L---------QNNELILVGVERRENEENANGYQIESLLGLLRTKLYELGQQGKIYAPFPA 447

Query: 415 DARNHIAQE-LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-----QGGMES 468
              + +  E L + N   FEF            +++ +I   H+PFT P        M  
Sbjct: 448 LTDSKVPIEFLWVENFPLFEF------------DQQGRIKSTHHPFTSPLELISANSMRE 495

Query: 469 LKG-NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           LK       +K+   DLV NG E+  G +R H  +  LQ      + K    + F  L  
Sbjct: 496 LKDPAKWTRLKSKSCDLVLNGNEVGGGSLRIH--DFDLQKTILTDVLKISSPDVFHHLLN 553

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           A + G PPHGG A G+DR++ LL G  ++R+V  FP S    D L  +P+ +S  Q +E+
Sbjct: 554 ALKQGCPPHGGFAIGLDRLLSLLRGKASIRDVIAFPKSITGSDPLTSAPTAISDSQWKEV 613

Query: 588 GLRIV 592
           G+ +V
Sbjct: 614 GMFLV 618


>gi|218671075|ref|ZP_03520746.1| aspartyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 193

 Score =  273 bits (697), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 124/195 (63%), Positives = 155/195 (79%), Gaps = 2/195 (1%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           M +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+EMSFV Q+D+ NTM  ++  +FEEF+
Sbjct: 1   MVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLEMSFVTQEDVWNTMGPLMTQIFEEFA 60

Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
            G  V+  + RI YD+AIR+YGTDKPDLRNPI+M  VTEHF  S F+VF+ +++ NP  +
Sbjct: 61  EGKPVTKEWPRIPYDEAIRKYGTDKPDLRNPIVMEAVTEHFAGSGFKVFAGMIASNPKVQ 120

Query: 326 VWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE 385
           +WAIPAK  GG+RAFCDRMN WA+SQGQPGL YIFWR  E+  + G GP+AK++    TE
Sbjct: 121 IWAIPAK-TGGSRAFCDRMNAWAQSQGQPGLGYIFWR-SENDKLEGAGPLAKNIGEERTE 178

Query: 386 AIRVRLDMQDGDSCF 400
           AIR +L + DGD+CF
Sbjct: 179 AIRTQLGLGDGDACF 193


>gi|119611366|gb|EAW90960.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_a [Homo
           sapiens]
          Length = 608

 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 190/601 (31%), Positives = 302/601 (50%), Gaps = 68/601 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKNFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I + +E +L+  +   ++ + V   F  + + + +  YGTDKPD R  + 
Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFGMK 340

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           + ++++ F ++E       LS   G  +   IP       R   + +  +A       + 
Sbjct: 341 IIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEIL 400

Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +F   + + N     PVA   +     E IR+ ++ Q+ D     AG+  K CS     
Sbjct: 401 PVFLNANRNWN----SPVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKL 455

Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLK 470
           R   A  L   G++  +   F F W++DFP +   EE  ++++ AH+PFT P        
Sbjct: 456 RLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAP-------- 507

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
                                       H S++ L         KE V+     L +A  
Sbjct: 508 ----------------------------HPSDIHLLYTEP---KKEDVK-MLSHLLQALD 535

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR++ L+ G+ ++R+V  FP S    DL+  +P +V  E+L+   +R
Sbjct: 536 YGAPPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIR 595

Query: 591 I 591
           +
Sbjct: 596 V 596


>gi|19075277|ref|NP_587777.1| mitochondrial aspartate-tRNA ligase [Schizosaccharomyces pombe
           972h-]
 gi|74582821|sp|O94242|SYDM_SCHPO RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; Flags:
           Precursor
 gi|3845470|emb|CAA19270.1| mitochondrial aspartate-tRNA ligase [Schizosaccharomyces pombe]
          Length = 611

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 190/606 (31%), Positives = 295/606 (48%), Gaps = 45/606 (7%)

Query: 17  VGSFVRLSGWV-------------HRVR-PHGGIIFLDIRDHYGITQ----VVANPD--- 55
           VG+ V + GW+             H++R  HG I+ L   D   + Q    +V++ D   
Sbjct: 14  VGTKVSIQGWLVATSRQVSKSISFHQLRDTHGTILQLLSTDKIILQQKREPLVSSTDFSQ 73

Query: 56  ---SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
              ++      S+  E V+ + G +  R            + EL  + +++L+VA+ L L
Sbjct: 74  QKSTSVMRTLSSIPPESVVQVTGKLQRRPEHDRRPG---NEFELHVEDVKLLNVAKNLQL 130

Query: 113 PVFGEREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
             F   E P   I+   R + LR    +  + +R+R+   +        F E  TP+L  
Sbjct: 131 --FPGDEKPGMRIQLANRHIQLRAPKYNSYLRQRSRLAYQVHSFFNDREFCEVETPLLFK 188

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           S+PEGAR+F+VPSR+N G FYALPQ+PQQYKQ+LMASG   Y+QIA CFRDED R DR P
Sbjct: 189 STPEGAREFVVPSRLNPGKFYALPQSPQQYKQILMASGIGNYYQIARCFRDEDLRFDRQP 248

Query: 232 GEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
            EF Q+D+EMSFV++  +I+  +E++L  +   F+ G T++  F  I Y  AI +YG+DK
Sbjct: 249 -EFTQIDLEMSFVDKPHEIMEVVEDLLVRLV-SFAKGITLAKPFQHITYQHAIDKYGSDK 306

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
           PD+R  + + N+T      +  + ++IL  N      +        +R  C+ + E    
Sbjct: 307 PDIRFELPLKNITSLLPKQDPLISTEILVYNDLSHSLS-----NAESRKLCEAVGENVVV 361

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
                 + +   + +   +  +  VA+ LN      I   + M +          PL   
Sbjct: 362 TSIREHSQLQTWVKKLPQLRQLPIVAEELNQKLQIGINSIVFMTNRPKYLVSGTTPLGKL 421

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESL 469
                      + L  ++ +  +F W++DFP +   EE+ + I   H+PFT P      L
Sbjct: 422 RLLLHELLVKKKALPELDKDLLKFVWVVDFPLFSPTEEKNQSITSTHHPFTAPHWDDVHL 481

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG---LY 526
                LS++   YD+V NG E+  G IR H  ++      +V    ++ ENR+     L 
Sbjct: 482 LEKKPLSVRGLHYDIVVNGIELGGGSIRIHNPDIQRFVLKDV---LKLPENRYATFEHLI 538

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           R    G PPHGGIA G DR+  LL  A  +REV  FP + +  DLL+GSPS +  E L++
Sbjct: 539 RVLSSGCPPHGGIALGFDRLAALLTNAPGIREVIAFPKTSSGADLLIGSPSAIPEEMLKD 598

Query: 587 LGLRIV 592
             + I 
Sbjct: 599 YNVAIT 604


>gi|56416504|ref|YP_153578.1| asparaginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|56387736|gb|AAV86323.1| asparaginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 325

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 149/323 (46%), Positives = 204/323 (63%), Gaps = 9/323 (2%)

Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
           ++ NF  +    ++ RYG+DKPDLRNP+++ +VTE F +S FR F     V  G  V AI
Sbjct: 6   LTGNFRELLTAISMIRYGSDKPDLRNPLVISDVTEIFRNSGFRTFQA--GVEAGEVVRAI 63

Query: 330 PAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIR 388
           PA    G  R+F D   E A+  G  GL Y+ +  D +      GP+AK L+      IR
Sbjct: 64  PAPNTSGKPRSFFDDKIERAKEFGARGLGYVTYEADGTAK----GPIAKFLSEDELARIR 119

Query: 389 VRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE 448
               + +GDS FF++    K   FA   R  +  ELG+I  + F+FCWI+DFP+++   E
Sbjct: 120 SAAGVGNGDSVFFMSDTADKAADFAGKIRELLGLELGLIEHDTFKFCWIVDFPYFKC--E 177

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           + ++DF HNPF+MPQG ME+L+  + L I A+QYD+VCNG EI+SG IRNH  +VM +AF
Sbjct: 178 DGELDFCHNPFSMPQGEMEALEQQNPLDIIAYQYDIVCNGIEISSGAIRNHRLDVMYKAF 237

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           S VG  ++ V ++FG L RAF+ G PPHGG+A GIDRIVMLL  A N+REV  FP++Q  
Sbjct: 238 SMVGYDEQTVNSKFGALVRAFKFGAPPHGGLAPGIDRIVMLLADAPNIREVICFPLNQTG 297

Query: 569 CDLLMGSPSTVSVEQLRELGLRI 591
            DLLMG+PS VS   L+EL + +
Sbjct: 298 EDLLMGAPSEVSPAHLQELSIAL 320


>gi|94263256|ref|ZP_01287072.1| tRNA synthetase, class II (D, K and N):nucleic acid binding,
           OB-fold, tRNA/helicase-type [delta proteobacterium
           MLMS-1]
 gi|93456339|gb|EAT06463.1| tRNA synthetase, class II (D, K and N):nucleic acid binding,
           OB-fold, tRNA/helicase-type [delta proteobacterium
           MLMS-1]
          Length = 345

 Score =  271 bits (692), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 134/292 (45%), Positives = 194/292 (66%), Gaps = 4/292 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H C  LG   +G  V L GWV R R HGG+IF+D+RD  GITQ+V NP+        A
Sbjct: 9   RSHHCNILGREQIGEQVTLMGWVLRRRDHGGVIFIDLRDRRGITQIVFNPEINPEVHTKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++R EWV+ + G V  R A   N  + TG IE+   ++ IL+ ++  P P+  E E  +
Sbjct: 69  HTLRPEWVVAVRGRVQQRPAGMENPKLTTGAIEVMIDELRILNRSQTPPFPLDEEIEVAD 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR T+  N+V R +   ++R  +  E+F+E  TP+LT S+PEGARD+LV
Sbjct: 129 QLRLKYRYLDLRRPTMAANLVLRHQASQAIRNFLNDEDFLEIETPVLTRSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G F+ALPQ+PQ +KQLLM +G +RY+QI  CFRDED R+DR P EF Q+D E+S
Sbjct: 189 PSRVNPGRFFALPQSPQLFKQLLMVAGMERYYQIVRCFRDEDLRADRQP-EFTQVDFELS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
           FV+++ ++   E +++ +F+  + G  ++  F R+ Y +A+ R+GTD+PDLR
Sbjct: 248 FVDEEGVMAVAEGMMKNLFKA-TLGRELAPPFPRMTYAEALARFGTDRPDLR 298


>gi|268557324|ref|XP_002636651.1| C. briggsae CBR-DRS-2 protein [Caenorhabditis briggsae]
          Length = 599

 Score =  270 bits (690), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 191/599 (31%), Positives = 293/599 (48%), Gaps = 40/599 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+CG+L  S+    V + GW+   R      F  +RD YG  Q     +S    + K 
Sbjct: 23  RSHTCGELNASNKDEKVSVMGWLSHKRMDR---FFVLRDAYGSVQATIPENSELKRLLKD 79

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E  +     V+    E  N  + TG IE+  +K+ +L+ A    LP+       E  
Sbjct: 80  LPYE-SIVRVDGVVVDRGENRNKAMKTGDIEIGVKKLTVLNKAVS-NLPLLPGVNANERT 137

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVP 183
           R KYR++DLR D L +++  R+  ++++R  ++ ++ F++  TP L   +P GA +F+VP
Sbjct: 138 RLKYRYIDLRSDKLQRSLRIRSEFVHNLRKFLVEKSGFVDVETPTLFRRTPGGATEFVVP 197

Query: 184 S-RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           +   N G  Y+LPQ+PQQ+KQLLM    DRYFQIA C+RDE  + DR P EF Q+D+EMS
Sbjct: 198 APSPNHGMAYSLPQSPQQFKQLLMVGAIDRYFQIARCYRDEGSKGDRQP-EFTQVDVEMS 256

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+ ++  +E+++   + E  N     + F RI Y  A+ +YG DKPD+R P  + +V
Sbjct: 257 FTTQEGVMQLIEDMVISAWPESLNHIKPKSPFPRISYSGAMAKYGIDKPDMRIPWEIEDV 316

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
                   F    K    N  +    I  +G G         NEW R            +
Sbjct: 317 KSGI----FNFLKKNDCEN--WRARVIVCRGTGKTSISNSIKNEWKR----------LIQ 360

Query: 363 LDESG-NVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           ++E+G N A   P  K     V  + I     + + D      G            RN++
Sbjct: 361 MNENGRNFAICHPSQKSWFKSVENQKIVDEFVLTEDDVLIVCWGHSDGVYWTLGQLRNYV 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGND---LLS 476
           A+  G+ +       W++DFP + +  EE ++   H+PFT P +   E L  +D   LL 
Sbjct: 421 AEVCGLRSEGGVTAHWVVDFPLFSF--EEGQLVSTHHPFTAPVEKDKEMLFESDNQKLLQ 478

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I    YDLV NG E+  G +R   SE+       +G   E +E+    L  A   G PPH
Sbjct: 479 ITGQHYDLVMNGVEMGGGSVRIENSEIQRHVLKVLGEPTEEMEH----LLNALSYGAPPH 534

Query: 537 GGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GG A G+DR V +L    N    VR+V  FP ++N  DL+  +P+T+S +QL+  G+ +
Sbjct: 535 GGFALGLDRFVAMLASDGNPLTPVRDVIAFPKTKNGKDLMSDAPTTLSQKQLQRYGITL 593


>gi|167519184|ref|XP_001743932.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777894|gb|EDQ91510.1| predicted protein [Monosiga brevicollis MX1]
          Length = 624

 Score =  270 bits (690), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 195/602 (32%), Positives = 294/602 (48%), Gaps = 54/602 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVAN-PDSACFEI 61
           YRTH CGDL    V   VR++GWV  +R  G  ++F+ +RD  G  QV A  PD     +
Sbjct: 43  YRTHMCGDL-TKHVKQQVRVAGWVEAIRKAGDDLLFVTLRDATGRVQVKATGPD---MHL 98

Query: 62  AKSVRSEWVLCIDGLVMSR-------SAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                 E V  I+G V  R       +     +++    +E+ +++ E LS A  LP   
Sbjct: 99  LAKTSIESVFAIEGEVCVRPDSARRSTHHDQQSSLELTDLEICSKRAEELSRAASLPFRP 158

Query: 115 FGEREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
               + P E  R ++R LDLRR  L   +  R ++    R  +    F+E  TP L   +
Sbjct: 159 ASLHDQPLEDTRLRHRPLDLRRAVLQDALRLRHKLSTRFRAALNDNGFLEVETPTLFKRT 218

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           P GA +FLVP+++  G FYAL Q+PQQYKQ+LM  G DRY+Q A C+RDE  R DR P E
Sbjct: 219 PGGANEFLVPTQMP-GKFYALVQSPQQYKQMLMVGGIDRYYQFARCYRDEGGRMDRQP-E 276

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F QLD+EM+F  Q +++  ME V++ V +++ +    +  F R+ + +A+ +YG+DKPD 
Sbjct: 277 FTQLDLEMAFAGQAEVMELMEKVVKHVLQDWID---TARPFERLTFHEAMSQYGSDKPDR 333

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-DRMNEWARSQG 352
           R  +++ +VT                +N G+  W   A        FC   M     SQG
Sbjct: 334 RFDMLLQDVTPEL-------------LNCGHVGWIATA----FVLFFCYSAMRSCLLSQG 376

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR-LDMQDGDSCFFIAGDPLKFCS 411
           +P L     +LD+  + A +   A     ++      R + M+ G       G       
Sbjct: 377 RPALRAKHAQLDDQKDFAVIALRADQAQRIDALQQHARGMGMEVGVGL----GMQQSIQE 432

Query: 412 FAADARNHIAQ-----ELGIINCNCFEFCWIMDFPFYEWNE-EEKKIDFAHNPFTMPQGG 465
                R +IAQ     +L  ++    +  W+ DFP +E +E    +I   H+PFT P   
Sbjct: 433 QLGKLRLYIAQILAEHDLLKLDDEQLDIFWVYDFPMFEQHELNSSRIQACHHPFTAPHPD 492

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
             +    + + ++A  YDLV NG E+  G +R H +E+      +V      V   F  L
Sbjct: 493 DIAYLETEPMKVRAQHYDLVMNGVELGGGSVRIHDAELQRYIIDHVLQDDPKV---FEQL 549

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLL---LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
            +A   G PPH GIA G DR+V++L    GA+++R+V  FP S    +L+  SPSTV+  
Sbjct: 550 LQALAYGAPPHAGIALGFDRLVLMLSRAAGARSLRDVMAFPKSFAGKELMSDSPSTVTAA 609

Query: 583 QL 584
            L
Sbjct: 610 DL 611


>gi|115434592|ref|NP_001042054.1| Os01g0153400 [Oryza sativa Japonica Group]
 gi|113531585|dbj|BAF03968.1| Os01g0153400 [Oryza sativa Japonica Group]
          Length = 384

 Score =  270 bits (689), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 149/395 (37%), Positives = 222/395 (56%), Gaps = 18/395 (4%)

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQ+LM SGF++Y+QIA CFRDED R+DR P EF QLDME++F   +D+L   E ++R +F
Sbjct: 1   KQMLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQLDMEIAFTSMEDMLKLNEELMRHIF 59

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
           +E  +   + N F R+ Y +A+ RYGTD+PDLR    + +V++ F+ S F++F+  L   
Sbjct: 60  QEVGD-IKLPNPFPRLTYTEAMNRYGTDRPDLRFDWQLKDVSDAFLGSSFKIFADTLENG 118

Query: 322 PGYEVWAIPAKGGGGNRAFCDR------MNEWARSQGQPGLAYIFWRLDESGNVAGMGPV 375
              +   +P    GG + F +       +   A   G  GL   F ++ ++G + G+GP+
Sbjct: 119 GVIKALCVP----GGAKEFSNTDLKKGTVYTEASKAGAKGLP--FLKVMDNGELEGIGPL 172

Query: 376 AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435
              L     E +   LD + GD   F  G+           R  IA +L +I+ +     
Sbjct: 173 VASLKPEKKEQLLKHLDAKSGDLILFALGEQSAANRILGRLRLFIAHKLEVIDTSAHSIL 232

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           W+ DFP +EWN +E++ +  H+PFT P    E +  NDL S +A  YD++ NG EI  G 
Sbjct: 233 WVTDFPMFEWNSDEQRYEALHHPFTAPNP--EDM--NDLPSARALAYDMIYNGVEIGGGS 288

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           +R + S+V  + F  +GIS E  E +FG L   F  G PPHGGIA G+DR+VMLL G  +
Sbjct: 289 LRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDMGAPPHGGIAYGLDRLVMLLAGENS 348

Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           +R+V  FP +      L  +PS V  +QL++LG R
Sbjct: 349 IRDVIAFPKTTTAQCSLTKAPSPVDPQQLKDLGFR 383


>gi|330896125|gb|EGH28346.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 397

 Score =  268 bits (686), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/403 (38%), Positives = 232/403 (57%), Gaps = 10/403 (2%)

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF+ ++DI+   E 
Sbjct: 1   QSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSFLNEEDIIGLTEK 59

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V +     EF+VFS
Sbjct: 60  MVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVADQLTGVEFKVFS 117

Query: 316 KILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374
              + +P   V A+   G     R+  D   ++    G  GLAYI       G      P
Sbjct: 118 GPAN-DPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVNERAKGPEGLQSP 176

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFE 433
           + K +   N   I  R+   DGD  FF A D  K  S A  A R  I  +L +  C  + 
Sbjct: 177 IVKFIPEDNLNVILDRVGAVDGDIVFFGA-DKFKIVSEALGALRIKIGNDLKLHTCE-WA 234

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             W++DFP +E N++       H+PFT P+   E L+ N   ++ +  YD+V NG E+  
Sbjct: 235 PMWVVDFPMFEENDD-GSFTALHHPFTAPKCTPEELEANPATAL-SRAYDMVLNGTELGG 292

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A G+DR+VML+ GA
Sbjct: 293 GSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGA 352

Query: 554 KNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 353 QSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 395


>gi|255660164|ref|ZP_05405573.1| aspartyl-tRNA synthetase [Mycoplasma genitalium G37]
          Length = 556

 Score =  268 bits (685), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 176/578 (30%), Positives = 287/578 (49%), Gaps = 47/578 (8%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G +    +   + + GW+ R++  G I F+ + D  G  QV         +I +  R + 
Sbjct: 16  GSISTEQLNKTIVIIGWIKRIKKLGEINFIIVGDKSGTIQVTCKDKE---QIQQLTREDI 72

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           V+    L    S           + EL    I++ S ++  PL +  E +  E +R KYR
Sbjct: 73  VIVKAKLQRLDSV----------RFELINPTIKLFSKSKTPPLIIEDETDALEEVRLKYR 122

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           +LDLRR  + K ++ R + I ++R     + FIE  TP L+ S+PEGA+DFLVP+R+ + 
Sbjct: 123 YLDLRRRLMQKRLLLRHQFILAIRNWFNQQGFIEIETPTLSKSTPEGAQDFLVPARIRKD 182

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            FYAL Q+PQ YKQLLM +G ++YFQIA  +RDED R DR P E  Q+D E+SF  Q  I
Sbjct: 183 CFYALVQSPQIYKQLLMIAGVEKYFQIARVYRDEDSRKDRQP-EHTQIDFEISFCNQKMI 241

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           +N +E +   VF +      +   F    + +   R+G+DKPDLR    + + T  F   
Sbjct: 242 MNLVEKLFFSVFLDVFQIK-IKKTFPVFKFSELFERFGSDKPDLRYGFEIKDFTSLFQDH 300

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
           + + F+K+           I AKG  G     +             +     ++     +
Sbjct: 301 QNQ-FTKL-----------IEAKGIIGGIELTN-------------IELSTDKIKALRKI 335

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIIN 428
           A    V+  ++  N   ++  +   + ++   +A    K    A  A RN +   L I+ 
Sbjct: 336 AKDHDVSLEVHNKNNSTLKTSIKCDEKNTLLLVANKSKKKAWTALGAIRNELKYHLDIVK 395

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQYDLVCN 487
            N + FCW++DFP Y+++E+  +    HN F+ P Q  +++ + N   ++   Q+DLV N
Sbjct: 396 PNQYSFCWVVDFPLYDFDEKTNQWISNHNIFSKPKQEWIDNFESNKNEALSE-QFDLVLN 454

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           GFEI SG IR +   V  +  +++ I      N+F  L  A+Q G P HGG+  GIDR++
Sbjct: 455 GFEIGSGSIRINDPIVQKRLMNSLNID----PNKFAFLLEAYQYGAPVHGGMGLGIDRLM 510

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
           M+L    N+REV  FP + +  ++   +P  +  E+++
Sbjct: 511 MILNQTDNIREVIAFPKNNHGIEVHTNAPDKIDKEEVK 548


>gi|12044886|ref|NP_072696.1| aspartyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351148|sp|P47282|SYD_MYCGE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3844646|gb|AAC71252.1| aspartyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166079025|gb|ABY79643.1| aspartyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 550

 Score =  268 bits (685), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 176/578 (30%), Positives = 287/578 (49%), Gaps = 47/578 (8%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G +    +   + + GW+ R++  G I F+ + D  G  QV         +I +  R + 
Sbjct: 10  GSISTEQLNKTIVIIGWIKRIKKLGEINFIIVGDKSGTIQVTCKDKE---QIQQLTREDI 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           V+    L    S           + EL    I++ S ++  PL +  E +  E +R KYR
Sbjct: 67  VIVKAKLQRLDSV----------RFELINPTIKLFSKSKTPPLIIEDETDALEEVRLKYR 116

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           +LDLRR  + K ++ R + I ++R     + FIE  TP L+ S+PEGA+DFLVP+R+ + 
Sbjct: 117 YLDLRRRLMQKRLLLRHQFILAIRNWFNQQGFIEIETPTLSKSTPEGAQDFLVPARIRKD 176

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            FYAL Q+PQ YKQLLM +G ++YFQIA  +RDED R DR P E  Q+D E+SF  Q  I
Sbjct: 177 CFYALVQSPQIYKQLLMIAGVEKYFQIARVYRDEDSRKDRQP-EHTQIDFEISFCNQKMI 235

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           +N +E +   VF +      +   F    + +   R+G+DKPDLR    + + T  F   
Sbjct: 236 MNLVEKLFFSVFLDVFQIK-IKKTFPVFKFSELFERFGSDKPDLRYGFEIKDFTSLFQDH 294

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
           + + F+K+           I AKG  G     +             +     ++     +
Sbjct: 295 QNQ-FTKL-----------IEAKGIIGGIELTN-------------IELSTDKIKALRKI 329

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIIN 428
           A    V+  ++  N   ++  +   + ++   +A    K    A  A RN +   L I+ 
Sbjct: 330 AKDHDVSLEVHNKNNSTLKTSIKCDEKNTLLLVANKSKKKAWTALGAIRNELKYHLDIVK 389

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQYDLVCN 487
            N + FCW++DFP Y+++E+  +    HN F+ P Q  +++ + N   ++   Q+DLV N
Sbjct: 390 PNQYSFCWVVDFPLYDFDEKTNQWISNHNIFSKPKQEWIDNFESNKNEALSE-QFDLVLN 448

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           GFEI SG IR +   V  +  +++ I      N+F  L  A+Q G P HGG+  GIDR++
Sbjct: 449 GFEIGSGSIRINDPIVQKRLMNSLNID----PNKFAFLLEAYQYGAPVHGGMGLGIDRLM 504

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
           M+L    N+REV  FP + +  ++   +P  +  E+++
Sbjct: 505 MILNQTDNIREVIAFPKNNHGIEVHTNAPDKIDKEEVK 542


>gi|58699434|ref|ZP_00374182.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534048|gb|EAL58299.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 257

 Score =  267 bits (682), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 126/202 (62%), Positives = 158/202 (78%), Gaps = 1/202 (0%)

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
           + GE+EYPE++RFKYRFLDLRR+ +  NI+ R++II  +R  MI   F+E  TPILTASS
Sbjct: 38  ITGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIIAELRKLMIERGFLEIQTPILTASS 97

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           PEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+DR PGE
Sbjct: 98  PEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGE 157

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           FYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F RI Y +A+ +YG+DKPDL
Sbjct: 158 FYQLDLEMSFVTQEDIFQIIESTLYRVFAKFSR-KSVDKDFPRITYKEAMLKYGSDKPDL 216

Query: 294 RNPIIMHNVTEHFVHSEFRVFS 315
           RNP+++ +VTE F  S F +F 
Sbjct: 217 RNPLLISDVTEIFRDSGFNIFK 238


>gi|254994367|ref|ZP_05276557.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 341

 Score =  267 bits (682), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 138/313 (44%), Positives = 200/313 (63%), Gaps = 4/313 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGTVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I    E++L  V +E  N  T+   F R+ Y +A+ R+G+DKPD+R  + + NV
Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN-ITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQNV 301

Query: 303 TEHFVHSEFRVFS 315
           ++     +F+VF 
Sbjct: 302 SDVVKDVDFKVFQ 314


>gi|302694319|ref|XP_003036838.1| hypothetical protein SCHCODRAFT_45975 [Schizophyllum commune H4-8]
 gi|300110535|gb|EFJ01936.1| hypothetical protein SCHCODRAFT_45975 [Schizophyllum commune H4-8]
          Length = 654

 Score =  266 bits (680), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 201/648 (31%), Positives = 307/648 (47%), Gaps = 80/648 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH+CG L  +DVG  V L+GW+   R  G  + F  ++D  G TQ+V   D +   ++ 
Sbjct: 26  RTHNCGTLSAADVGKKVVLAGWLLPERKAGKHVSFFPLKDSSGATQLVVKRDGSAAGLS- 84

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LP-LPVFGEREYP 121
            V  E V+ I+G V  R             I++      +L+ A+E LP +P        
Sbjct: 85  DVTVESVVLIEGEVSLRPENQRRVP----DIDIVVSDFRVLNPAQEDLPFVPSDVTHLAN 140

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-------FIECSTPILTASSP 174
           E +R +YR+LDLRR  L +NI KR+++ ++ R  +  E        F E  TP+L  SSP
Sbjct: 141 EDLRARYRYLDLRRTALSENIQKRSKVAHTARTVLEQEGTQHVHLGFTEVETPVLLRSSP 200

Query: 175 EGARDFLVPSRVNQGS-----FYALPQAPQQYKQLLMASG-FDRYFQIAPCFRDEDPRSD 228
           EGAR++LVPSR+ +       FYAL Q+PQQ KQLL+ SG  DRYFQ+A CFRDE  R D
Sbjct: 201 EGAREYLVPSRIARAEDDRPVFYALQQSPQQPKQLLICSGAVDRYFQLAKCFRDEGGRKD 260

Query: 229 RLPGEFYQLDMEMSFVEQD---------------DILNTMENVLRGVFEEFSNGNTVSNN 273
           R P EF Q+DMEM+FV                  ++ +T+E ++  ++   + G  + ++
Sbjct: 261 RQP-EFTQIDMEMAFVSWGPDEASLARGWRIGGAEVRDTIERLVPAMWAA-AEGTELPSD 318

Query: 274 FLRICYDDAIRRYGTDKPDLR-----------NPIIMHNVTEHFVHSEFRVFSK------ 316
           F  + Y +A+ R+G+DKPD R           +   + ++T +   ++     +      
Sbjct: 319 FPVMTYQEAMNRFGSDKPDTRFGLEVSTWAPYDRAPISDITPYLPSAQREALEREGEILQ 378

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
            L V  G    A  A   G  R   D  N  +  +    LA +    D +  +  + P  
Sbjct: 379 ALIVRGGEFTAASHAAQSGAERILIDEGNRASWHRTSSILAGLPSPSDSACEIPSLQP-G 437

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG--IINCNCFEF 434
            HL +        R  +  G S       PL          + +AQ+ G   +  +   F
Sbjct: 438 DHLWLAR------RTKLAQGGST------PLGKLRLQL---SELAQQRGDLTLPAHARNF 482

Query: 435 CWIMDFPFYEWNEEEKKI------DFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCN 487
            WI +FP +   +E+K+         +H+PFT P    +  +    +  ++   YDLV N
Sbjct: 483 LWITEFPLFTNADEDKEFLAHGRWSSSHHPFTAPMWEDVPKMYDGRINEVRGQHYDLVLN 542

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G EI  G +R H + +    F+N+       +  F  L  A +CG PPHGGIA G DRI+
Sbjct: 543 GVEIGGGSVRVHDAAMQDHIFTNILQLSPSEKAPFEHLLHALRCGAPPHGGIALGFDRIM 602

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            +L    ++R+V  FP +    DLL  SP+ V  + LRE  L  ++ P
Sbjct: 603 SILCNTPSIRDVIAFPKTSGGTDLLFRSPAPVGEDVLREYRLEYLKKP 650


>gi|215765302|dbj|BAG86999.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 382

 Score =  265 bits (678), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 147/393 (37%), Positives = 220/393 (55%), Gaps = 18/393 (4%)

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           +LM SGF++Y+QIA CFRDED R+DR P EF QLDME++F   +D+L   E ++R +F+E
Sbjct: 1   MLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQLDMEIAFTSMEDMLKLNEELMRHIFQE 59

Query: 264 FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
             +   + N F R+ Y +A+ RYGTD+PDLR    + +V++ F+ S F++F+  L     
Sbjct: 60  VGD-IKLPNPFPRLTYTEAMNRYGTDRPDLRFDWQLKDVSDAFLGSSFKIFADTLENGGV 118

Query: 324 YEVWAIPAKGGGGNRAFCDR------MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAK 377
            +   +P    GG + F +       +   A   G  GL   F ++ ++G + G+GP+  
Sbjct: 119 IKALCVP----GGAKEFSNTDLKKGTVYTEASKAGAKGLP--FLKVMDNGELEGIGPLVA 172

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
            L     E +   LD + GD   F  G+           R  IA +L +I+ +     W+
Sbjct: 173 SLKPEKKEQLLKHLDAKSGDLILFALGEQSAANRILGRLRLFIAHKLEVIDTSAHSILWV 232

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
            DFP +EWN +E++ +  H+PFT P    E +  NDL S +A  YD++ NG EI  G +R
Sbjct: 233 TDFPMFEWNSDEQRYEALHHPFTAPNP--EDM--NDLPSARALAYDMIYNGVEIGGGSLR 288

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            + S+V  + F  +GIS E  E +FG L   F  G PPHGGIA G+DR+VMLL G  ++R
Sbjct: 289 IYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDMGAPPHGGIAYGLDRLVMLLAGENSIR 348

Query: 558 EVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           +V  FP +      L  +PS V  +QL++LG R
Sbjct: 349 DVIAFPKTTTAQCSLTKAPSPVDPQQLKDLGFR 381


>gi|256028559|ref|ZP_05442393.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766479|ref|ZP_06525857.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289718034|gb|EFD82046.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 309

 Score =  265 bits (678), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 139/306 (45%), Positives = 203/306 (66%), Gaps = 9/306 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+ G+L + ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLGELRLKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NLNIPTGEIEVFAKEIEILNACDTLPFQISGVDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  + G   +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVT-GEEANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298

Query: 299 MHNVTE 304
           + ++++
Sbjct: 299 LKDLSD 304


>gi|270006699|gb|EFA03147.1| hypothetical protein TcasGA2_TC013060 [Tribolium castaneum]
          Length = 549

 Score =  265 bits (677), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 177/558 (31%), Positives = 284/558 (50%), Gaps = 31/558 (5%)

Query: 38  FLDIRDHYGITQV-VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIEL 96
           F  +RD YG TQ+ V   D+   ++ +++  E ++ + G V+SR  +  N    TG IE+
Sbjct: 4   FAVLRDSYGATQLLVPEEDTKTQKLLQNLPFESIIQVKGTVLSRPTDMKNKKQPTGDIEI 63

Query: 97  SAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155
             +   +L+ A++ LP  +    +  E++R +YR+LDLR   + +N+  R+ ++  MR  
Sbjct: 64  FIEHFTVLNKAKDSLPFHIREHHKAKEALRMQYRYLDLRYPLMQRNLRVRSEMLMKMREF 123

Query: 156 MIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           ++  + F++  TP L  ++P GA++F+VP+R   G FY+L Q+PQQ+KQ+LMA   DRYF
Sbjct: 124 LVNHSGFVDVETPTLFKATPGGAQEFIVPTRF-PGQFYSLVQSPQQFKQMLMAGAVDRYF 182

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           QIA C+RDE  R DR P EF QLD+EMSF + D+IL  +E +L   +  F     +   F
Sbjct: 183 QIARCYRDEGARPDRQP-EFTQLDIEMSFTDLDNILQLVEELLGHAWPPFL--GPLPKKF 239

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
            R+ + +A+  YG+D+PD R    + N TE    +E      I S + G      P +  
Sbjct: 240 QRMGFGEAMELYGSDQPDTRFGFKLENCTELLKLNE----KFINSDDFGAYCIVFPKEYA 295

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
             N+   + + +   S+  P + ++         VA  G +A  L  +  + +  +L   
Sbjct: 296 NLNKGVKENLEKI--SKQFPLVKFV------QTKVATPGELAPKLGKLLGDNVAAKLANH 347

Query: 395 DGDSC--FFIAGDPLKFCSFAADAR----NHIAQELGI-INCNCFEFCWIMDFPFYEWNE 447
             D C  F   G+  +  S     R    NH+ Q LG+ +        W++D P +E  E
Sbjct: 348 VSDDCVLFLGFGNKKQTQSLMGKVRLEYANHLEQ-LGVSVRAKGMHLLWVVDMPLFEPGE 406

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
               +  AH+PFT P      L     L +++  +DLV NG EI  G +R H  ++  + 
Sbjct: 407 SPGSLQSAHHPFTAPNPDDLLLLDTAPLQVRSLSFDLVLNGNEIGGGSVRIHDPDLQEKI 466

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           F  + I K    N    +      G PPHGGIA G+DR++  +L   ++R+V  FP +  
Sbjct: 467 FRMLNIDK----NSMQHIIDMLSSGCPPHGGIALGLDRLMSKILNTASIRDVIAFPKTFE 522

Query: 568 FCDLLMGSPSTVSVEQLR 585
             D L G+PS VS   L+
Sbjct: 523 GRDPLSGAPSAVSDADLK 540


>gi|164655283|ref|XP_001728772.1| hypothetical protein MGL_4107 [Malassezia globosa CBS 7966]
 gi|159102656|gb|EDP41558.1| hypothetical protein MGL_4107 [Malassezia globosa CBS 7966]
          Length = 715

 Score =  264 bits (675), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 211/651 (32%), Positives = 307/651 (47%), Gaps = 82/651 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH+C  +G +DV   V L+GWV   R     + F+ ++D  G  Q+V + D A  +   
Sbjct: 64  RTHACSQVGSNDVNERVVLAGWVLAPRKISRQLAFVPLQDASGTVQLVLH-DPALVDAFA 122

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYP- 121
            V  E V+ + G V +R+   IN  + TG +E+  +   +L+ A   LP      RE   
Sbjct: 123 QVPVESVVSVQGAVQARAEGAINPAMRTGAVEVRVESWTLLNAATPTLPFYATQCREPAS 182

Query: 122 ---ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              ES+R K+R+LDLRR +L +NI +R+R+ ++ RC +    F E  TPIL  S+PEGAR
Sbjct: 183 LPKESLRAKHRYLDLRRSSLSENIRRRSRVAHAARCFLHDHAFTEIETPILLRSTPEGAR 242

Query: 179 DFLVPSR-VNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           +FLVP+R   +  FYAL Q+PQQ KQLLM SG  DRYFQ A CFRDED R DR P EF Q
Sbjct: 243 EFLVPTRSAPEPQFYALQQSPQQPKQLLMVSGVTDRYFQFAKCFRDEDGRKDRQP-EFTQ 301

Query: 237 LDMEMSFV----EQ-------DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           LDMEMSFV    +Q        +I +  E ++R ++   +    + N F  + Y+ A+  
Sbjct: 302 LDMEMSFVCGHGDQPAWPLGGTEIRDVTEGLVRSMWTAAAQPYALPNPFPIMSYEHAMTT 361

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-------GGNR 338
           YG+DKPD R  + + N+          +      V P YE   +  +          G+R
Sbjct: 362 YGSDKPDTRFGLRIANLIPTCTSHALDIL-----VLPQYESCKLSGRAKEALLLDQHGHR 416

Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNV------AGMGPVAKHLNI---------VN 383
              +     A       LA++   L +S +V        +GP  + L++         V 
Sbjct: 417 CAIEHFK--AHRSAPDKLAHLL--LTKSRHVHDVMHSGKLGPADRALDVSSLTHTLQDVL 472

Query: 384 TEAIRVRLD----MQDGDS---C-FFIAGDPLKF---CSFAADARNHIAQELGIINCNCF 432
            +A   R D       GDS   C  ++A   L      +   D R  IA  L I +    
Sbjct: 473 RDATAFRCDGASAHAHGDSDDRCDVYLATRSLPIDGGSTPMGDLRLRIADALPIRSAEP- 531

Query: 433 EFCWIMDFPFYEWNEEEK------KIDFAHNPFTMP-----QGGMESL-------KGNDL 474
              WI  FP +   + +K      +   +H+PFT P     Q   ES+       +   L
Sbjct: 532 AVLWITQFPLFTRADADKAEAAHGRWSSSHHPFTAPLASDVQRLYESVACRAPADRDAIL 591

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             I    YDLV NG EI  G +R H  ++    F ++    +    RF  L  A + G P
Sbjct: 592 AQIHGQHYDLVLNGAEIGGGSVRVHDPDLQRMIFRDILELSDDEVGRFSHLLHALESGAP 651

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
           PH GIA G DR + +L    ++R+V  FP + +  D L  SP+ +   + R
Sbjct: 652 PHAGIALGFDRFMAILCDTLSIRDVMAFPKTGSGTDPLFSSPAALDAPEQR 702


>gi|290559874|gb|EFD93197.1| tRNA synthetase class II (D K and N) [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 457

 Score =  263 bits (671), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 158/461 (34%), Positives = 249/461 (54%), Gaps = 15/461 (3%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           CG +   D+   V L+GW   +R HGG IF+D+ D  G+ Q+V     A  + AK +  E
Sbjct: 5   CGKICQDDLDKEVTLNGWCRYIRDHGGKIFVDLADRTGMCQLVFEGHLA--DNAKELGRE 62

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---PESIR 125
           +VL I G V  R  ET++ +  TG++E+  + ++I+S +E  P  +  E++     E IR
Sbjct: 63  YVLNISGTVRLRDKETVDEDNPTGRLEVLVKSLDIISKSETPPFEITDEKKKFLASEDIR 122

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-GARDFLVPS 184
            KYR+LDLRR  +  NI  R ++    R      +F+E  TP L   + E GAR F+VPS
Sbjct: 123 LKYRYLDLRRKEMIDNIEFRDKVTKRARRFFWDNDFLELETPTLVKDTYETGARPFIVPS 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R  +G F++LPQ+PQ YKQL M SG  +YFQ+A  FRDED R DR P EF QLD E+SF 
Sbjct: 183 RTKKGMFFSLPQSPQIYKQLAMMSGLGKYFQVARAFRDEDQREDRQP-EFTQLDFEVSFK 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++ +E++++ +F +   G  +   F ++ Y +A+ +YG+DKPD+R    + ++T+
Sbjct: 242 DESYIMSLVEDLIKSIFNDVI-GEKLKVPFKKMDYYEAMSKYGSDKPDIRYDYPIIDITD 300

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAK--GGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
               S++ + ++++      +     A+   G  N+ F   + E A+S G  GL ++F R
Sbjct: 301 EIKDSDYNIINRVIQAGGSVKAVCFSAEYPNGKVNKDFMLSIIEIAKSNGLKGLTWLFVR 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIA 421
               G +  +          + E I  +L  Q+GD   F A  D          AR  I 
Sbjct: 361 ---DGKLNSIPESIAEAMSKSEEKILNKLKAQEGDIIIFGADMDEDLLLQAIGKARKIIG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
            ++G      F F W++DFP +E ++   K+  +HNPFT P
Sbjct: 418 DKIGKF-TEQFSFLWVIDFPLFELDKITGKLKPSHNPFTAP 457


>gi|309354922|emb|CAP39658.2| CBR-DARS-2 protein [Caenorhabditis briggsae AF16]
          Length = 629

 Score =  259 bits (662), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 193/613 (31%), Positives = 295/613 (48%), Gaps = 55/613 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+CG+L  S+    V + GW+   R      F  +RD YG  Q     +S    + K 
Sbjct: 23  RSHTCGELNASNKDEKVSVMGWLSHKRMDR---FFVLRDAYGSVQATIPENSELKRLLKD 79

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E ++ +D  V+    E  N  + TG IE+  +K+ +L+ A    LP+       E  
Sbjct: 80  LPYESIVRVD-GVVVDRGENRNKAMKTGDIEIGVKKLTVLNKAVS-NLPLLPGVNANERT 137

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVP 183
           R KYR++DLR D L +++  R+  ++++R  ++ ++ F++  TP L   +P GA +F+VP
Sbjct: 138 RLKYRYIDLRSDKLQRSLRIRSEFVHNLRKFLVEKSGFVDVETPTLFRRTPGGATEFVVP 197

Query: 184 S-RVNQGSFYALPQAPQQYKQLLMASGFDRYFQ---------------IAPCFRDEDPRS 227
           +   N G  Y+LPQ+PQQ+KQLLM    DRYFQ               IA C+RDE  + 
Sbjct: 198 APSPNHGMAYSLPQSPQQFKQLLMVGAIDRYFQVFLNGETEKKTLIFQIARCYRDEGSKG 257

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
           DR P EF Q+D+EMSF  Q+ ++  +E+++   + E  N     + F RI Y  A+ +YG
Sbjct: 258 DRQP-EFTQVDVEMSFTTQEGVMQLIEDMVISAWPESLNHIKPKSPFPRISYSGAMAKYG 316

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
            DKPD+R P  + +V        F    K    N  +    I  +G G         NEW
Sbjct: 317 IDKPDMRIPWEIEDVKSGI----FNFLKKNDCEN--WRARVIVCRGTGKTSISNSIKNEW 370

Query: 348 ARSQGQPGLAYIFWRLDESG-NVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGD 405
            R            +++E+G N A   P  K     V  + I     + + D      G 
Sbjct: 371 KR----------LIQMNENGRNFAICHPSQKSWFKSVENQKIVDEFVLTEDDVLIVCWGH 420

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QG 464
                      RN++A+  G+ +       W++DFP + +  EE ++   H+PFT P + 
Sbjct: 421 SDGVYWTLGQLRNYVAEVCGLRSEGGVTAHWVVDFPLFSF--EEGQLVSTHHPFTAPVEK 478

Query: 465 GMESLKGND---LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
             E L  +D   LL I    YDLV NG E+  G +R   SE+       +G   E +E+ 
Sbjct: 479 DKEMLFESDNQKLLQITGQHYDLVMNGVEMGGGSVRIENSEIQRHVLKVLGEPTEEMEH- 537

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLLMGSPS 577
              L  A   G PPHGG A G+DR V +L    N    VR+V  FP ++N  DL+  +P+
Sbjct: 538 ---LLNALSYGAPPHGGFALGLDRFVAMLASDGNPLTPVRDVIAFPKTKNGKDLMSDAPT 594

Query: 578 TVSVEQLRELGLR 590
           T+S +QL+ L  R
Sbjct: 595 TLSQKQLQRLVQR 607


>gi|299747321|ref|XP_001836954.2| aspartyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|298407466|gb|EAU84571.2| aspartyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 687

 Score =  259 bits (662), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 201/670 (30%), Positives = 308/670 (45%), Gaps = 114/670 (17%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RTHSCG L   D GS V L+GW+   R    + F  ++D  G TQ+  N  S  +     
Sbjct: 48  RTHSCGSLSAQDAGSKVVLAGWLLPERKGKAVSFYPLKDSEGTTQLTVNHSSNPSASNTL 107

Query: 63  KSVRSEWVLCIDGLVMSRSAE----------TINANII----------TGQIELSAQKIE 102
            S+  E  + I G V  R             +++ +++           G I++   ++ 
Sbjct: 108 SSISVESAVLIQGTVALRPETARRPVREHPLSLSRHVLIVRLCPLKGPAGDIDVEVDQVT 167

Query: 103 ILSVAEELPLPVFGEREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENF 161
           +L+ A  LP         P E +R +YRFLDLRR  L  NI KR+++ + +R  +  + F
Sbjct: 168 LLNPAASLPFVPSNVHNLPSEDLRARYRFLDLRRTALSSNIKKRSKVAHIIRSTLHDQGF 227

Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGS----------FYALPQAPQQYKQLLMAS-GF 210
            E  TP+L  SSPEGAR+FLVP+R +  S          FYAL Q+PQQ KQLL+ S G 
Sbjct: 228 TEVETPVLLRSSPEGAREFLVPTRQSNHSDASPRESDPLFYALQQSPQQPKQLLICSGGV 287

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV--------------EQD--------D 248
           D+YFQIA CFRDED R DR P EF Q+D+EM+FV              EQD        +
Sbjct: 288 DKYFQIAKCFRDEDGRKDRQP-EFTQVDLEMAFVSWGNPNSPPTHPSAEQDQAWNIGGHE 346

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY--------GTDKP---DLRNPI 297
           + + +E+++R ++++   G  +S  F  + Y +A+ R         GT  P   D+   I
Sbjct: 347 VRDVIEDLIRKIWQDV-EGVQLSPRFKVMTYREAMERIVNLSDLLSGTPTPAGDDILECI 405

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           ++    E     E+   S+ L  +P  E W +              ++ W        +A
Sbjct: 406 VVRKSRE----PEYIAASRTLE-HPEAERWILTKSS----------VDNWLLKS---KVA 447

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
              +  D          + +    +  EA    L +Q GD  +      L      A  R
Sbjct: 448 RAIYDAD----------LPEGAQKILNEA----LQLQPGDHVYLSHRSRLPKGGSTALGR 493

Query: 418 NHI-----AQELGIINCN-CFEFCWIMDFPFYEWNEEEKKI------DFAHNPFTMPQ-G 464
             +     AQ+ G +       F WI +FP +  ++ +K+         +H+PFT P   
Sbjct: 494 TRLGIFETAQKRGDVTVTEEPHFLWITEFPLFTHDDSDKEFLAHGRWSSSHHPFTAPMWQ 553

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
            +++L   D+  ++   YDLV NG EI  G +R H + +    F+ V    +  +  F  
Sbjct: 554 DIDALYKGDIEHVRGQHYDLVLNGVEIGGGSVRIHDATMQDYIFTQVLQLSDQEKAPFNH 613

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  A +CG PPHGGIA G DR++ +L   +++R+V  FP S    D +  SP+ V  E L
Sbjct: 614 LLHALRCGAPPHGGIALGFDRLMAMLCKTQSIRDVIAFPKSSGGKDPMFRSPAPVDGEVL 673

Query: 585 RELGLRIVEN 594
            + G+R+  N
Sbjct: 674 GQYGIRLASN 683


>gi|320583678|gb|EFW97891.1| aspartyl-tRNA synthetase, mitochondrial [Pichia angusta DL-1]
          Length = 646

 Score =  259 bits (661), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 179/614 (29%), Positives = 293/614 (47%), Gaps = 76/614 (12%)

Query: 19  SFVRLSGWVHR--VRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           S V L+GW+ R   +    ++F  +RD       +   D    E   S + E V+ + G 
Sbjct: 51  STVILNGWIDRPPKKLSSKLVFACLRDTKSDYAQLICKDQETAEKLASRKPEDVVSVVGT 110

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V  + ++           EL  + +++L+ A+   + +   +        ++R+L LR+ 
Sbjct: 111 VQPKKSKDGQPETW----ELVLKDLKVLNSADIQTVQLNSLKHTTGQFPQEFRYLQLRQP 166

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
              +++ KR +I    R  + A  F+E  TP+L  S+PEGA +FLVP+R  QG FYALPQ
Sbjct: 167 YYQRSLRKRAQIAAVARRVLDANEFVEIETPLLFKSTPEGADEFLVPTR-KQGQFYALPQ 225

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQQYKQLLMASGFDRY+Q+A CFRDED R+DR P EF Q+D+EMSF +++D+++T+E V
Sbjct: 226 SPQQYKQLLMASGFDRYYQLAKCFRDEDLRADRQP-EFTQIDLEMSFAKKEDVMHTVETV 284

Query: 257 LRGVFEEFSNGNTVSNN-------------FLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++ +F+E    +  + +             F R+ Y +A+  YG DKPDLR+ +      
Sbjct: 285 IKAIFKETRQADLFTPSEDMSSLVLSGEKPFKRLSYREAMHYYGIDKPDLRSNL------ 338

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-NEWARSQGQPGLAYIFWR 362
                  F++ ++        +   +P   G  N    D++ +    S  +P +A    +
Sbjct: 339 ------RFKLLNEFYDSQGSVQGVVLP---GAANLDGIDQLISSHEYSNRRPYIA----K 385

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-------------IAGDPLKF 409
           +    ++      +  +   N   +   L +Q GD                 +  +P   
Sbjct: 386 IKSMNDLTTWHSASPFVFKGNINELNESLGLQVGDVVALGDLVYPDKERHRHVYENPTPL 445

Query: 410 CSFAADARNHIAQ----ELGIINCNCFEFCWIMDFPFYEWNEE------------EKKID 453
             F   A  H       + G    + F  CW+ +FP +   E+            +   +
Sbjct: 446 GKFRQLAIQHFPDLWRYDTGQSTNDTFAACWVTNFPLFSPTEDPLSKGKEYPVYLKDTYE 505

Query: 454 FAHNPFTM---PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
             H+PFTM    QG   SL  +++L ++   YDLV NG E+  G  R H ++V       
Sbjct: 506 ATHHPFTMFDLTQGVTPSL--DNVLDVEGEHYDLVINGVEVGGGSQRIHDAQVQRYVLKE 563

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           + +     E  FG L +A   G PPH G A G DR+  +++G+ N+R+V  FP +Q   D
Sbjct: 564 I-LKVHNAEELFGHLLKALDSGCPPHAGFAVGFDRLCSMIVGSSNIRDVVAFPKTQAGTD 622

Query: 571 LLMGSPSTVSVEQL 584
            ++GSPS V+ + L
Sbjct: 623 PVVGSPSRVAQDTL 636


>gi|295093803|emb|CBK82894.1| Aspartyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 343

 Score =  257 bits (657), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 141/353 (39%), Positives = 205/353 (58%), Gaps = 14/353 (3%)

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIRRYGTDKPDLRNPII 298
           MSF  Q+D+    E VL   FE+F+    V     +  I Y  A+  +GTDKPDLRNP+ 
Sbjct: 1   MSFATQEDVFKVGEEVLSATFEKFAPEGAVVTQAPYPIISYKQAMLEFGTDKPDLRNPLR 60

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + ++T+ F    F+ F        G  V AI       ++   ++M ++A+S G  GL Y
Sbjct: 61  IIDLTDFFQRCTFKPFH-------GKTVRAINVHKKL-SKGQHEKMLKFAQSIGMGGLGY 112

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +    D S      GP+ K +       I     +Q GD+ FFIA       SFA   R 
Sbjct: 113 LEILEDMSYK----GPIDKFIPDDMKGEIAELAGLQPGDTIFFIADVEELAASFAGQIRI 168

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +   L +   N F FC+I DFP YE+++E KKI F HNPF+MPQGG+E+L   D L I 
Sbjct: 169 ELGNRLDLNEKNAFRFCYINDFPMYEYDKESKKIIFTHNPFSMPQGGLEALNEKDPLDIL 228

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG +RNH  ++M++AF   G +++ ++ +FG LY AFQ G PPH G
Sbjct: 229 AYQYDIVCNGIELSSGAVRNHDMKIMVKAFEIAGYTEDDLKEKFGALYNAFQFGAPPHAG 288

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +A G+DR++MLL   +N+REV  FPM+ N  DL+ G+P  V+ +QLRE+ +++
Sbjct: 289 MAPGVDRMIMLLRNEENIREVIPFPMNGNAQDLMCGAPGEVTEQQLREVHIKV 341


>gi|156847162|ref|XP_001646466.1| hypothetical protein Kpol_1048p39 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117143|gb|EDO18608.1| hypothetical protein Kpol_1048p39 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 660

 Score =  253 bits (647), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 201/629 (31%), Positives = 303/629 (48%), Gaps = 82/629 (13%)

Query: 16  DVGSFVRLSGWVHRVRPHG---GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           +VG+ V ++GW+ R +P     G+IF ++RD  G    + + +S      K    E V+ 
Sbjct: 44  EVGTKVVINGWLDR-KPKKIGKGLIFGNLRDIDGNKIQIVDTNSKL----KGGSVEDVVQ 98

Query: 73  IDGLV-MSRSAETINANIITGQI-ELSAQKIEILSVAEELP--LPVFGER-EYPESIRFK 127
           I+G++ + + +   N+ + +G++ E+    I  L+ A E P  L  F  +  YP     +
Sbjct: 99  IEGILGIKKDSNDNNSTLDSGKVYEIKLDDITTLNKANEKPSQLQDFKIKGNYPP----E 154

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           YR+L LR     K + KR  I   +R  + ++ F E  TPIL  S+PEGAR+FLVP+R  
Sbjct: 155 YRYLQLRLPEYQKFLKKRYNISTRIREYLASKAFTEVETPILFKSTPEGAREFLVPTRKE 214

Query: 188 QGS-----FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                   FY+LPQ+PQQYKQLLMASG +RYFQIA CFRDED R+DR P EF Q+D+EM+
Sbjct: 215 STVGKLPLFYSLPQSPQQYKQLLMASGVNRYFQIAKCFRDEDLRADRQP-EFTQVDLEMA 273

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTV----SNNFL----------RICYDDAIRRYGT 288
           F   +D++N +E ++  V++EF+    +     N+ L          R+ Y +A+ +YG 
Sbjct: 274 FSSGEDVMNVVEELIPSVWKEFAESGPLLTLNENDELVEVTKEQPAKRMTYKEAMTKYGI 333

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           DKPDLR P +   +T+    SEF V S      P +EV  +        R   D    W 
Sbjct: 334 DKPDLRAPNLQ--ITD---LSEFNVHSTQHKNFPVFEVMVL----KNAFRNIEDYNKNWT 384

Query: 349 RSQGQPGLAY----IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD------- 397
                    Y    +    DE   +          +I N + +   L+++ GD       
Sbjct: 385 HLSNSDNYPYRTPIVVPIADEETRLNWFEKFLTITDIENPKLVSNFLNLEKGDIICGSTR 444

Query: 398 ---SCFFIAGDPL-KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE---- 449
                 F    PL K      + +  + +             W++DFP +   E E    
Sbjct: 445 EKSESLFENPTPLGKLRQLVLETKLGVEKYASTRQDVA---SWVVDFPLFSPQEVETIPK 501

Query: 450 --KKIDF----------AHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
              K+ F           H+PFTM +    E L  +D        YDLV +G E+  G  
Sbjct: 502 DGTKLHFPQYKENSFTSTHHPFTMVRLQDYEKLSTDDPSQCLGQHYDLVVSGVELGGGST 561

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  E+    F N+ +     EN FG L +AF+ G PPH G+A G DR+  ++ G  ++
Sbjct: 562 RIHDPELQNYIFHNI-LKINDPENLFGHLLQAFKMGTPPHAGLAIGFDRMCAMVCGRNSI 620

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
           R+V  FP S +  D ++GSPSTV+ E L+
Sbjct: 621 RDVIAFPKSISGSDTVVGSPSTVNEEILK 649


>gi|227555481|ref|ZP_03985528.1| possible aspartyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|227175391|gb|EEI56363.1| possible aspartyl-tRNA synthetase [Enterococcus faecalis HH22]
          Length = 286

 Score =  253 bits (646), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 129/285 (45%), Positives = 183/285 (64%), Gaps = 4/285 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+ +   +EIA
Sbjct: 4   RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    +
Sbjct: 64  DKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVND 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 ELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
           F+  ++I    EN+L  V +E + G  +S  F R+ YD+A+ RYG
Sbjct: 243 FLTPEEIQTYTENMLAEVMKE-TKGIEISVPFPRMSYDEAMARYG 286


>gi|321454344|gb|EFX65518.1| hypothetical protein DAPPUDRAFT_264578 [Daphnia pulex]
          Length = 572

 Score =  252 bits (643), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 196/632 (31%), Positives = 300/632 (47%), Gaps = 130/632 (20%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+CG+L  SDVG  V+LSGWV   R +    F+ +RD YG+TQ+V  PD         
Sbjct: 13  RSHTCGELRKSDVGRKVKLSGWVQFQRMNK---FVLLRDAYGVTQLVV-PDE-------- 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123
                                  N +TG IE+    +E+LS +   LP  V   +E P+ 
Sbjct: 61  -----------------------NQLTGDIEVILDDVEVLSSSISNLPFTV---QESPKL 94

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           ++                IV+                F++  TP L   +P GA++F+VP
Sbjct: 95  LK----------------IVRH-------------HGFVDIETPTLFRRTPGGAQEFVVP 125

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R + G FY+L Q+PQQ+KQLLM  GFDRYFQIA C+RDE  + +R P EF Q+D+EMSF
Sbjct: 126 TRTS-GKFYSLVQSPQQFKQLLMIGGFDRYFQIARCYRDEGTKPNRQP-EFTQVDIEMSF 183

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
             +++I   +E +L  V+ E  +   +   F  + Y DA++ YG DKPD R  +++ +VT
Sbjct: 184 TTKENIQRLIEGLLNHVWPE--DMGRIPIPFPEMTYKDAMKNYGVDKPDTRFDVLLQDVT 241

Query: 304 EHFVHSEF-RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR-SQGQPGLAYIFW 361
           E    SE  R+F     V+               +++      E A+ + G+  L+++  
Sbjct: 242 ELAKASEISRIFGTSEIVDFAAIALVFKDSAALISKSAEQSFLESAKMTTGKTNLSFVLN 301

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG----------------- 404
           R+ + GN      +AK L      +I  RL    GD      G                 
Sbjct: 302 RI-QDGN-KWKSSLAKKLTQETMNSIGDRLGASAGDVVLLGLGPRESLVMEWWGALYSLH 359

Query: 405 -DP-----LKFCSFAA-----------------DARNHIAQELGI-INCNCFEFCWIMDF 440
            +P     L   ++ A                 +  NH+ + LG+ +  N   F W++DF
Sbjct: 360 FEPRRETLLAVLNYGAIDVLTWILVPSMGKMRLEVANHL-ETLGVKLRSNSKNFLWVVDF 418

Query: 441 PFYEWNEEEK--KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           P +  +EE     +  AH+PFT P    E L  +  L ++   YDLV NG EI  G IR 
Sbjct: 419 PLFLPSEELDGGPLQSAHHPFTAPHPEDEHLLRSSPLDVRGLHYDLVLNGSEIGGGSIRI 478

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLY---RAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           H S+V           KE+++     L+   +A  CG PPHGGIA G+DR++ ++   K+
Sbjct: 479 HQSDVQELVL------KEILQEDPANLHHLLKALSCGAPPHGGIALGLDRLMSIICDTKS 532

Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           +R+V  FP S +  DL+ G+PS++S E+ +E+
Sbjct: 533 IRDVIAFPKSLDGKDLMSGAPSSIS-EKEKEM 563


>gi|213408891|ref|XP_002175216.1| aspartyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212003263|gb|EEB08923.1| aspartyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 591

 Score =  251 bits (640), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 182/543 (33%), Positives = 271/543 (49%), Gaps = 44/543 (8%)

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR- 125
           +E V+ + GLV  R  +         + E+  Q IE+L+ A+  PLP F   + P +I  
Sbjct: 69  AESVVRVRGLVCKRPLKDQRPG---QECEVEVQDIELLNAADS-PLP-FNPLQPPSNILT 123

Query: 126 -FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
             ++R L LR   + KN+  R+ +   +        F E  TP+L  S+PEGAR+FLVPS
Sbjct: 124 CLRHRHLYLRSPLMQKNLRLRSELSYQIHSFFHEHEFCEVETPLLFKSTPEGAREFLVPS 183

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R + G FYAL Q+PQQ KQ LMASGF RY+Q A CFRDED R+DR   EF Q+DMEM+FV
Sbjct: 184 RHDPGCFYALTQSPQQIKQTLMASGFHRYYQFARCFRDEDLRADR-QIEFTQIDMEMAFV 242

Query: 245 -EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
             ++ +++ +E ++R +++        S  F R+ Y +A+ RYGTDKPDLR+        
Sbjct: 243 YNREQVMSVVEALIRFLWKRVLGLELKS--FPRLTYKEALARYGTDKPDLRH-------- 292

Query: 304 EHFVHSEFRVFSKILSVNPGYEVW--AIPAKGGGGN--RAFCDRMNEWARSQGQPGLAYI 359
                + F+  ++IL +N   +V   A   K GG +   +FC  +   ++ +    L YI
Sbjct: 293 ----DTSFKCLNEILQLNLQNDVLIEAFLVKQGGHHLSESFCKTLKHNSKQK----LNYI 344

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             + +   +          L    T  +   L ++ GD   F++  P     FA  A   
Sbjct: 345 HVKNENIMHSWSQQLPETKLMPHETTRLNEFLGLEVGD-IIFVSSRP-SHSPFAMTALGE 402

Query: 420 I-------AQELGI---INCNCFEFCWIMDFPFYEWNEEEKKI-DFAHNPFTMPQGGMES 468
           +         E+ +   +N + F F WI+DFP    +          H+PFT P      
Sbjct: 403 VYPLVHKALTEMKVAPKLNEHEFAFTWIVDFPLVTPDASNPNAWKATHHPFTAPHPEDIH 462

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           L  N+ L  +A  YDLV NG E+  G IR H  +   +   +V    +     F  L+  
Sbjct: 463 LLQNNPLDARALSYDLVVNGIELGGGSIRIHDYQQQYEILRDVLKLTDTEIRSFEHLFTI 522

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
            + G PPHGG A G DR+V L+ G +++R+V  FP + +  DLL  SP  VS  QL E  
Sbjct: 523 LRSGCPPHGGFALGYDRLVALMAGCRDIRDVIAFPKTASGKDLLFQSPGPVSSSQLTEYK 582

Query: 589 LRI 591
           L++
Sbjct: 583 LQL 585


>gi|330927912|ref|XP_003302056.1| hypothetical protein PTT_13732 [Pyrenophora teres f. teres 0-1]
 gi|311322828|gb|EFQ89869.1| hypothetical protein PTT_13732 [Pyrenophora teres f. teres 0-1]
          Length = 633

 Score =  249 bits (637), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 196/626 (31%), Positives = 312/626 (49%), Gaps = 78/626 (12%)

Query: 24  SGWVHRV---RPHGGIIFL--------DIRDHYGITQVVANPDSACFEIAKS-------- 64
           +GW+ R+   +P G  I +        D+ +    T +     S C ++  +        
Sbjct: 30  NGWISRISQEKPSGEDIEVFGYLSTRRDVSNKLSFTMLRHKNGSQCIQLVSTSANEEAHA 89

Query: 65  -VRS--EWV-LCIDGLVMSRSAETINANI---ITGQIELSAQKIEILS-VAEELPLP--- 113
            +RS  EW  + + G +M R A   +  +   +  Q E++   I+ L+ ++ ++ +    
Sbjct: 90  RIRSLKEWTPVIVRGKLMDRKAPKDDKYLGMKLEAQKEIAVDHIQPLNEISNDIIIKNDT 149

Query: 114 VFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
           VFG  +         R L LR D  L +N++ R+  +   R  + A+ + E  TP+L  S
Sbjct: 150 VFGPHQ---------RHLQLRTDNELRQNLILRSEAMAMARQHLNAQMWKEIETPVLFKS 200

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           +PEGAR+FLVP+R  +G  YALPQ+PQQYKQ+LMASG  +Y+Q A CFRDED R DR P 
Sbjct: 201 TPEGAREFLVPTR-QKGLAYALPQSPQQYKQILMASGITKYYQFARCFRDEDLRVDRQP- 258

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF QLDMEM+F  +++++  +E +L+ V++  +N  T+   F R+ Y +A+  YG+DKPD
Sbjct: 259 EFTQLDMEMAFAGEEEVMQEIERLLKEVWKHVNN-VTLHGRFERMTYHEAMASYGSDKPD 317

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSV-NPGYEVWAIP-AKGGGGNRAFC-------DR 343
           LR    +H++T+H       +  KI S+ NP  +   I  ++     R F        D 
Sbjct: 318 LRFKSKIHDITQHLTSD---LVGKITSLQNPAIDAMKISMSEDPKITRKFIAGFLDSPDG 374

Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR----LDMQDGDSC 399
                   GQPG+    +  D S  + G+GP+     +   E++ V     L +Q     
Sbjct: 375 KPYLDNPDGQPGI----FIGDLSQPMQGLGPLGYQYVMEGPESLAVENGDVLILQARPDA 430

Query: 400 FFIAGDPLKFCSFAADARNHIAQELGIINC---NCFEFCWIMDFPFYEWNEE-------E 449
            F  G  +      A  +  IAQ  G+IN      ++F WI DFP +  + +       E
Sbjct: 431 PFSGGSTMLGNLRLALHKAAIAQ--GLINAPEEQDYKFLWITDFPLFTPSSDSEPGQGGE 488

Query: 450 KKIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
                 H+PFT P+   +  +  +D  + KA  YD+V NG E+  G  R H + V    F
Sbjct: 489 AGFSSTHHPFTAPKTPEDVEILLSDPSAAKAAHYDIVVNGVELGGGSRRIHSAAVQEFIF 548

Query: 509 SNV-GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            ++  +  E +E+ F  L    + G PPH GIA G DR++ +L   ++VR+V  FP S  
Sbjct: 549 KDILKMKPERIED-FRHLLDVLRSGCPPHAGIALGWDRLMAVLCHRESVRDVIAFPKSGK 607

Query: 568 FCDLLMGSPSTVSVEQLRELGLRIVE 593
             DLL+ SP+ ++ +QL    L++ E
Sbjct: 608 GEDLLVKSPTRMTEDQLSTYHLQVKE 633


>gi|58260596|ref|XP_567708.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57229789|gb|AAW46191.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 693

 Score =  248 bits (634), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 192/649 (29%), Positives = 301/649 (46%), Gaps = 83/649 (12%)

Query: 6   THSCGDLGVSDVGSFVRLSGWV-HRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAK 63
           TH   DL  S V   V ++GW+  + R    + F  +R     + V + + D    +   
Sbjct: 70  THDIADLSPSLVDQKVVIAGWLFSQRRASDNLHFFTLRSPSSSSAVQLVSRDKNVSKDVM 129

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YP 121
               E V+ + G V +R  +    +    +IEL  Q + +L+ A++  LP +  R     
Sbjct: 130 EYPLESVVLVQGTVKARRQKAKAISSAVDEIELEVQGVTLLNPADQT-LPFYPNRPEVAN 188

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R ++R+LDLRR  L  N+  R+++ + +R  +  + F E  TPIL  SSPEGAR+FL
Sbjct: 189 EDLRAQHRYLDLRRQDLADNLKTRSKVAHIIRNYLHDQGFTEIETPILLNSSPEGAREFL 248

Query: 182 VPSRV-----NQGSFYALPQAPQQYKQLLMASG-FDRYFQIAPCFRDEDPRSDRLPGEFY 235
           VP+R       Q +FYALPQ+PQQ KQLL++SG   +Y+QIA CFRDED R DR P EF 
Sbjct: 249 VPTRSPTPEGGQPTFYALPQSPQQPKQLLVSSGAIPKYYQIAKCFRDEDGRRDRQP-EFT 307

Query: 236 QLDMEMSFV----EQ---------------DDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           Q+D+EM FV    EQ                ++   +E +++ +++E   G  +   F  
Sbjct: 308 QIDLEMGFVSGAAEQPKGEGEMRSTWAIGGQEVREVVEGMIKKIWKEV-KGVDLEGWFRV 366

Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGG 334
           + Y+ A+  YG+DKPD R  +    +  +   S+  +   +L  NP    W +   A+  
Sbjct: 367 MPYEVAMDVYGSDKPDTRFDMYTLPIGYYPTLSDDSLDKVLLDQNPYTVEWMVTPAAQAA 426

Query: 335 G-------GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI 387
           G       GN +F D                 + ++  +   + +G        V T ++
Sbjct: 427 GLDIPSIAGNNSFID-----------------YVKITSANTHSWLG------ESVLTASL 463

Query: 388 RVRLD------MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF------EFC 435
            + LD      +  GD  +      +    +    R  +     ++            F 
Sbjct: 464 GLSLDKSLPGGVNPGDVIWLSRRKKIAEGGWTHLGRLRVQLMEALVAKGLMTLPTQPHFL 523

Query: 436 WIMDFPFYEWNEEEK------KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNG 488
           WI  FP +   +E+K      +    H+PFT P    +  LK   +  ++   YDLV +G
Sbjct: 524 WITQFPLFTLADEDKIHLSRGRYSSTHHPFTAPMYEDLADLKAGKIDGVRGQHYDLVLDG 583

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
            EI  G +R H + +       V    E    RF  L RA +CG PPHGG+A G DR+V 
Sbjct: 584 QEIGGGSVRIHDARLQEWVMKEVLQLDEQEMGRFDHLLRALKCGAPPHGGLALGFDRLVA 643

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +L GAK++R+V  FP S    D +  SPS    E L+E GL+ ++  +K
Sbjct: 644 ILCGAKSIRDVIAFPKSTTGQDPVFKSPSVSGNEVLKEYGLQSLKREEK 692


>gi|134117039|ref|XP_772746.1| hypothetical protein CNBK1200 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255364|gb|EAL18099.1| hypothetical protein CNBK1200 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 693

 Score =  248 bits (633), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 190/649 (29%), Positives = 300/649 (46%), Gaps = 83/649 (12%)

Query: 6   THSCGDLGVSDVGSFVRLSGWV-HRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAK 63
           TH   DL  S V   V ++GW+  + R    + F  +R     + V + + D    +   
Sbjct: 70  THDIADLSPSLVDQKVVIAGWLFSQRRASDNLHFFTLRSPSSSSAVQLVSRDKDVSKDVM 129

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YP 121
               E V+ + G V +R  +    +    +IEL  Q + +L+ A++  LP +  R     
Sbjct: 130 EYPLESVVLVQGTVKARRQKAKAISSAVDEIELEVQGVTLLNPADQT-LPFYPNRPEVAN 188

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R ++R+LDLRR  L  N+  R+++ + +R  +  + F E  TPIL  SSPEGAR+FL
Sbjct: 189 EDLRAQHRYLDLRRQDLADNLKTRSKVAHIIRNYLHDQGFTEIETPILLNSSPEGAREFL 248

Query: 182 VPSRV-----NQGSFYALPQAPQQYKQLLMASG-FDRYFQIAPCFRDEDPRSDRLPGEFY 235
           VP+R       Q +FYALPQ+PQQ KQLL++SG   +Y+QIA CFRDED R DR P EF 
Sbjct: 249 VPTRSPTPEGGQPTFYALPQSPQQPKQLLVSSGAIPKYYQIAKCFRDEDGRRDRQP-EFT 307

Query: 236 QLDMEMSFVE-------------------QDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           Q+D+EM FV                      ++ + +E +++ +++E   G  +   F  
Sbjct: 308 QIDLEMGFVSGAAEPPKGEGEMRSTWAIGGQEVRDVVEGMIKKIWKEV-KGVDLEGWFRV 366

Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGG 334
           + Y+ A+  YG+DKPD R  +    +  +   S+  +   +L  NP    W +   A+  
Sbjct: 367 MPYEVAMDVYGSDKPDTRFDMYTLPIGYYPTLSDDSLDKVLLDQNPYTVEWMVTPAAQAA 426

Query: 335 G-------GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI 387
           G       GN +F D                 + ++  +   + +G        V T ++
Sbjct: 427 GLDIPSIAGNNSFID-----------------YVKITNANTHSWLG------ESVLTASL 463

Query: 388 RVRLD------MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF------EFC 435
            + LD      +  GD  +      +    +    R  +     ++            F 
Sbjct: 464 GLSLDKSLPGGVNPGDVIWLSRRKKIAEGGWTHLGRLRVQLMEALVAKGLMTLPTQPHFL 523

Query: 436 WIMDFPFYEWNEEEK------KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNG 488
           WI  FP +   +E+K      +    H+PFT P    +  LK   +  ++   YDLV +G
Sbjct: 524 WITQFPLFTLADEDKIHLSRGRYSSTHHPFTAPMYEDLADLKAGKIDGVRGQHYDLVLDG 583

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
            EI  G +R H + +       V    E    RF  L RA +CG PPHGG+A G DR+V 
Sbjct: 584 QEIGGGSVRIHDARLQEWVMKEVLQLDEQEMGRFDHLLRALKCGAPPHGGLALGFDRLVA 643

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +L GAK++R+V  FP S    D +  SPS    E L+E GL+ ++  +K
Sbjct: 644 ILCGAKSIRDVIAFPKSTTGQDPVFKSPSVSGNEVLKEYGLQSLKREEK 692


>gi|320186112|gb|EFW60856.1| aspartyl-tRNA synthetase [Shigella flexneri CDC 796-83]
          Length = 314

 Score =  248 bits (632), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 130/294 (44%), Positives = 190/294 (64%), Gaps = 6/294 (2%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRS 81
           L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G V +R 
Sbjct: 3   LCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARD 62

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            + IN ++ TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR  + + 
Sbjct: 63  EKNINRDMATGEIEVLASSLTIINRADVLPLD--SNHVNTEEARLKYRYLDLRRPEMAQR 120

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +
Sbjct: 121 LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLF 180

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R ++
Sbjct: 181 KQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLW 239

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
            E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+
Sbjct: 240 LEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFA 291


>gi|317038560|ref|XP_001401678.2| aspartyl-tRNA synthetase [Aspergillus niger CBS 513.88]
          Length = 676

 Score =  246 bits (627), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 198/612 (32%), Positives = 299/612 (48%), Gaps = 62/612 (10%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDH-YGIT-QVVANPDSACFEIAKSVRSEWVLCID 74
           G  V L G++ +    G  + F  + DH  G T Q+++N  S      K +     + + 
Sbjct: 88  GQSVLLHGYLDKRDDMGKELSFARLYDHTMGRTIQLLSNSQSNTLPQLKKISRGSPVVVQ 147

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELP--LPVFGER-EYPESIRFKYRFL 131
           G V  R  +T         +E++ + I+ L+   E P  + +FG+   +P     K+R L
Sbjct: 148 GTVKRRVTKTAEEER-NDYLEIALESIQPLN---EFPREIVLFGKNIVHPP----KHRHL 199

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAEN----FIECSTPILTASSPEGARDFLVPSRVN 187
            LR D   ++ + R R      CR   E     F+E  TP+L  S+PEGAR+F+VP+R  
Sbjct: 200 QLRSDKELRDAL-RFRAQARNVCRETLEQLKPAFVEIETPLLFKSTPEGAREFIVPTR-K 257

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           +G  YALPQ+PQQYKQ+LMASG  RYFQ A CFRDED R+DR P EF QLD+EM+F    
Sbjct: 258 RGKAYALPQSPQQYKQILMASGIPRYFQFARCFRDEDLRADRQP-EFTQLDLEMAFAAGQ 316

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
           D++  +E ++RG++         S  F R+ Y +A+ RYG+DKPD R+ + +H V EH +
Sbjct: 317 DVMAVVEEIIRGLWGNMMREPVPSGPFRRMTYQEAMTRYGSDKPDTRHGMEIHRV-EHLL 375

Query: 308 HSEFRVFSKILSV-NPGYEVWAIPA--KGGGGNRAFCDRMNEWARS-------QGQPGLA 357
            ++  + SKI  + +P  E + +    +     R F  R  +            G PG+ 
Sbjct: 376 PAD--LVSKITPLTDPIVEAFKMDTVEQLPSATREFVSRFFDSTEGVPFNKNPDGAPGI- 432

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA---- 413
           +I+   DE   + G+GP    L     E I+  LD+  GD     A     F   A    
Sbjct: 433 FIY---DEGQPLKGLGP----LGFEAAEKIQEMLDLSHGDLLILQARPQGPFAGGATQLG 485

Query: 414 ----ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTMP 462
               A A   I++EL       FEF WI+DFP +   +  +        +   H+PFT P
Sbjct: 486 SIRRAMAAASISEELREAPPG-FEFLWIVDFPLFSPADASEPGQGGTAGLSATHHPFTAP 544

Query: 463 QGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVEN 520
           +   +  L   D     A  YDLV NG E+  G  R H +      F  +  + KE ++ 
Sbjct: 545 KTSSDVDLLSKDPTKALADHYDLVVNGVELGGGSRRIHCALTQNYIFKEILKMPKERIDE 604

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTV 579
            F  L  A   G PPH G A G DR++ ++LG ++VR+V  FP + +   D ++ +P  +
Sbjct: 605 -FQHLLNALWAGCPPHAGFALGFDRLITVMLGKESVRDVIAFPKIGKKGEDAMVKAPGKI 663

Query: 580 SVEQLRELGLRI 591
           S E  R   +++
Sbjct: 664 SEEVARLYNIKL 675


>gi|254584564|ref|XP_002497850.1| ZYRO0F14938p [Zygosaccharomyces rouxii]
 gi|238940743|emb|CAR28917.1| ZYRO0F14938p [Zygosaccharomyces rouxii]
          Length = 655

 Score =  244 bits (624), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 202/622 (32%), Positives = 300/622 (48%), Gaps = 84/622 (13%)

Query: 18  GSFVRLSGWVHRVRPHGG--IIFLDIRDHYG-ITQVVANPDSACFEIAKSVRSEWVLCID 74
           G  V ++GW+ +     G  +IF +IRD  G + QVV   DS  F   K+   E V+ + 
Sbjct: 58  GDKVVINGWIDKKPRKIGKELIFGEIRDSQGDVIQVV---DSQSF--LKNAAVEDVVQVQ 112

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEE--LPLPVFGER-EYPESIRFKYRFL 131
           G +  +  +   ++     +EL  + +  L+ A++    L  F  +  YP     +YR+L
Sbjct: 113 GSLALKKGK--KSDEPKTSLELKLESVATLNGADKRAADLQDFKTKGAYPP----EYRYL 166

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---- 187
            LR     + +  R ++  ++R +     F E  TPIL  S+PEGAR+FLVP+R      
Sbjct: 167 QLRLPKFQQFLQTRYQLSKALRQKFDELGFTEIETPILFKSTPEGAREFLVPTRRTTTDE 226

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +FYALPQ+PQQYKQLLMASG +RYFQ+A CFRDED R+DR P EF QLD+EM+F   +
Sbjct: 227 EPTFYALPQSPQQYKQLLMASGINRYFQVAKCFRDEDLRADRQP-EFTQLDLEMAFANGE 285

Query: 248 DILNTMENVLRGVFEEFS--------NGNTV----SNNFLRICYDDAIRRYGTDKPDLRN 295
           D++ ++E  +  V+++ S         GN V    S     + Y  A+ +YG DKPDL  
Sbjct: 286 DVMQSVEEAVTFVWKKLSRGLYTLDIQGNVVPVSESQPVRHMSYRQAMSQYGIDKPDLCA 345

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN---EWARSQG 352
           P +     +    SEFR         P +EV  +         AF D+ +   +W+  + 
Sbjct: 346 PDL-----KILDLSEFRALGNSDKSFPIFEVLIL-------RNAFDDKKDFNKKWSFLKN 393

Query: 353 -------QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD-SCFFIAG 404
                   P +  I    D+S  V     +A      N + +   LD+Q GD  C     
Sbjct: 394 PEHYNYRTPKVVPILNEQDKSQWVDQFLDIA---FFENPKLVAKALDLQPGDIICGSTRQ 450

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFE--------FCWIMDFPF-----------YEW 445
           D LK   F         ++L ++  N ++          WI DFP            +E+
Sbjct: 451 DILKL--FENPTPLGKLRQL-VMKSNAYKDKLIDQDVAVWIKDFPLFSPVEKESSNNFEY 507

Query: 446 NE-EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
            E EE +++ +H+PFTM Q    +  G +        YDLV NG E+  G  R H  ++ 
Sbjct: 508 PEYEEDRVESSHHPFTMVQIRDYAKLGTNPTQALGQHYDLVVNGVELGGGSTRVHDPQLQ 567

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              F  +   KE     FG L  AF+ G PPH G A G DR+  +L G +++R+V  FP 
Sbjct: 568 EYIFEEILKIKE-PHKVFGHLLEAFKMGTPPHAGFAIGFDRMCAMLCGTESIRDVMAFPK 626

Query: 565 SQNFCDLLMGSPSTVSVEQLRE 586
           S    DL++GSPSTV  E L +
Sbjct: 627 SVTGSDLVVGSPSTVKNEALEQ 648


>gi|167574466|ref|ZP_02367340.1| aspartyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 226

 Score =  244 bits (622), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 113/211 (53%), Positives = 150/211 (71%), Gaps = 4/211 (1%)

Query: 386 AIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEW 445
           +I   L+   GDS FFIAG P  F  FA + R H+A +L +I    FEFCWI DFP YEW
Sbjct: 8   SIASELESVTGDSLFFIAGVPRDFYKFAGELRQHLATKLDLIAKQRFEFCWITDFPMYEW 67

Query: 446 NEEEKKIDFAHNPFTMPQGGMESLKG----NDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            E+E++IDF HNPF++PQGG E+L+        L++KA+QYD+VCNG E++SG +RNH+ 
Sbjct: 68  AEKEQRIDFCHNPFSLPQGGFEALEAAVTVEQQLALKAYQYDIVCNGIELSSGAVRNHVP 127

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E+M +AF   G     +E++FGG+ RA Q G PPHGGIA GIDRIVMLL GA N+R+V +
Sbjct: 128 EIMYKAFEIAGYRPADLEDKFGGMLRALQFGAPPHGGIAPGIDRIVMLLAGASNLRDVVM 187

Query: 562 FPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           FPM+Q   DL+MG+PSTV+  QL +L ++IV
Sbjct: 188 FPMNQQGEDLMMGAPSTVAARQLTDLHIQIV 218


>gi|67522507|ref|XP_659314.1| hypothetical protein AN1710.2 [Aspergillus nidulans FGSC A4]
 gi|40745674|gb|EAA64830.1| hypothetical protein AN1710.2 [Aspergillus nidulans FGSC A4]
          Length = 658

 Score =  244 bits (622), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 190/581 (32%), Positives = 289/581 (49%), Gaps = 60/581 (10%)

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT-GQIELSAQKIEILSVA 107
           Q+V+   +A FE  +S+R    + + G V ++ A+  NA +      E+  + I++L+  
Sbjct: 103 QLVSTAQNASFEQLRSLRPNSPVTVKGKVQAKKAK--NAEMEKRDPWEIVLEDIQLLN-- 158

Query: 108 EELPLPVFGEREYPESIRF-KYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAEN----F 161
            + P  ++     P+ +   K+R L LR  + L + +  R ++ N   CR   E     F
Sbjct: 159 -DFPSDIWMA---PDMVHPPKHRHLQLRTSSELREALEFRAQVRNV--CREELEQGRPPF 212

Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           +E  TP+L  S+PEGAR+FLVP+R   G  YALPQ+PQQYKQ+LMASG  RY+Q A CFR
Sbjct: 213 VEIETPLLFKSTPEGAREFLVPTR-KHGLAYALPQSPQQYKQILMASGIPRYYQFARCFR 271

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
           DED R+DR P EF QLD+EMSF   +D++  +E ++R ++    +    S  F R+ Y D
Sbjct: 272 DEDLRADRQP-EFTQLDLEMSFATGEDVMRVVEGIIRRLWSTLMDTEAPSGPFRRLSYQD 330

Query: 282 AIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV-NPGYEVWAI------PAKGG 334
           A+ RYG+DKPD R  + ++ V EH +  +  + +KI  + NP  E++ I      PA   
Sbjct: 331 AMTRYGSDKPDTRYGMEIYRV-EHLLPVD--LINKITPLTNPIVEIFKINGNDNDPAAMS 387

Query: 335 GGNRAFCDR-----MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV 389
                F D       NE    +G PG+ +++   D    + G+ P          E +  
Sbjct: 388 EFITKFLDSPAGAPFNE--NPEGGPGI-FVY---DARKPLCGLQP----FGFQAAEYVEE 437

Query: 390 RLDMQDGDSCFFIAGDPLKFCSFAA---DARNHI---AQELGIINCNC-FEFCWIMDFPF 442
            ++   GD     A +   F   +    D R  +   A E G       F+F WI+DFP 
Sbjct: 438 IIEPDHGDLLVMQAREAAPFTGGSTPIGDLRRALYSAAVETGFKPAAVGFDFLWIVDFPL 497

Query: 443 YEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASG 494
           +  + + +        I   H+PFT P+   +  L   D   + A  YDLV NG E+  G
Sbjct: 498 FSPSTDSEPGQGGAAGISSTHHPFTAPKSAADVDLLLTDPTKVVADHYDLVVNGVELGGG 557

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
             R H + V      NV          F  L  A + G PPH G+A G DR+V ++LG  
Sbjct: 558 SRRIHDAAVQEFVLRNVLQMPPERLTEFSHLLEALRAGCPPHAGLALGFDRLVAVMLGKD 617

Query: 555 NVREVSLFPMSQNFC-DLLMGSPSTVSVEQLRELGLRIVEN 594
           +VR+V  FP +     D ++ +PS VS+E L+   LR+ + 
Sbjct: 618 SVRDVIAFPKTGKLGEDPMVKAPSPVSLEALKTYHLRLTDE 658


>gi|146422591|ref|XP_001487231.1| hypothetical protein PGUG_00608 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 687

 Score =  243 bits (621), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 190/644 (29%), Positives = 302/644 (46%), Gaps = 89/644 (13%)

Query: 16  DVGSFVRLSGWVHRV-RPHGGIIFLDIRDHYGIT-QVVANPDSA---CFEIAKSVRSEWV 70
           D    + L G ++R  R    I F ++RD  G T Q++  PD      F+I     +E  
Sbjct: 67  DNKDVIVLHGHLNRTPRIRSKISFAELRDVSGDTVQLILMPDRTPPEYFDILSKTSTEDS 126

Query: 71  LCIDGLVMSRSAETINANIITGQI---ELSAQKIEILSVAEELPLPVFGEREY-PESIRF 126
           +C+ G V  +        ++ G++   EL    I++L++A E    +   +   P  +  
Sbjct: 127 ICVSGTVQLK-------KLVAGELRKWELVITSIQLLNLANEEAARLDKLKHSDPNKLPP 179

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVPS 184
            YRFL LR   L KN+  R+++   +R  ++ E  NF E  TP+L  S+PEGAR+FLVP+
Sbjct: 180 HYRFLQLRTKELQKNLRTRSKMAAVVR-HVLGEKHNFTEIETPLLFKSTPEGAREFLVPT 238

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R +   FYALPQ+PQQYKQ+LM+SGF RY+Q+A CFRDED R+DR P EF Q+D+EMSF+
Sbjct: 239 R-SPNKFYALPQSPQQYKQILMSSGFTRYYQLAKCFRDEDLRADRQP-EFTQVDLEMSFI 296

Query: 245 EQDD-ILNTMENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAIRRYG 287
              D +L  +E+V+ G+    ++                 N  S +F ++ Y  A+ +YG
Sbjct: 297 SHSDQVLCVVEDVIYGICNNVASKPVYTLNEDGYIIEAQKNGTSPSFYKLSYKSALEKYG 356

Query: 288 TDKPDLRNPIIMHNVTEHF----VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
            DKPDLR+ +   N++ +F       EF +            + A   KG     A CD 
Sbjct: 357 IDKPDLRSSLQFVNLSSYFKPVNCPDEFNI------------IEACILKGALAKCAHCDI 404

Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKH-----LNIVNTEAIRVRLDMQDGDS 398
            +           A     +  S        + K      ++  + + +   L +++GD 
Sbjct: 405 PDSLTNPDNYSRRAPSIIPITNSSATTWFETLTKDGVMVPVDSFDPQKLNELLGLEEGDI 464

Query: 399 CF--------FIAGDPL-KFCSFA-ADARNHIAQEL-------GIINCNCFEFCWIMDFP 441
                     +    PL +F + A A+  +   ++L        +   + F  CW+ DFP
Sbjct: 465 IAISNRSEHPYENPTPLGRFRNLAMAEYPDKWKRKLIDSSGNTSVPPSDAFVSCWVHDFP 524

Query: 442 FYEWNEEEK------------KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
            +  +EE                +  H+PFTM +    SL  +D        YDLV NG 
Sbjct: 525 LFSPSEENSGSNDLYPKYNWDHRESTHHPFTMVKSEDYSLLESDPYLAHGEHYDLVINGV 584

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G  R H   V       V +  +   + FG L  A   G PPH G+A G DR+  +
Sbjct: 585 EVGGGSRRIHNPLVQQYVLEEV-LKIKNYNSLFGHLLEALSFGCPPHAGLALGFDRLCAM 643

Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           ++G +++R+V  FP +Q+  D ++ SPS V  E L +  ++ ++
Sbjct: 644 VVGTQSIRDVIAFPKNQSGVDPVVSSPSNVDSETLADYYIQTID 687


>gi|259487051|tpe|CBF85413.1| TPA: Aspartyl-tRNA synthetase, hypothetical mitochondrial protein
           (Eurofung) [Aspergillus nidulans FGSC A4]
          Length = 679

 Score =  243 bits (620), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 190/581 (32%), Positives = 289/581 (49%), Gaps = 60/581 (10%)

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT-GQIELSAQKIEILSVA 107
           Q+V+   +A FE  +S+R    + + G V ++ A+  NA +      E+  + I++L+  
Sbjct: 124 QLVSTAQNASFEQLRSLRPNSPVTVKGKVQAKKAK--NAEMEKRDPWEIVLEDIQLLN-- 179

Query: 108 EELPLPVFGEREYPESIRF-KYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAEN----F 161
            + P  ++     P+ +   K+R L LR  + L + +  R ++ N   CR   E     F
Sbjct: 180 -DFPSDIWMA---PDMVHPPKHRHLQLRTSSELREALEFRAQVRNV--CREELEQGRPPF 233

Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           +E  TP+L  S+PEGAR+FLVP+R   G  YALPQ+PQQYKQ+LMASG  RY+Q A CFR
Sbjct: 234 VEIETPLLFKSTPEGAREFLVPTR-KHGLAYALPQSPQQYKQILMASGIPRYYQFARCFR 292

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
           DED R+DR P EF QLD+EMSF   +D++  +E ++R ++    +    S  F R+ Y D
Sbjct: 293 DEDLRADRQP-EFTQLDLEMSFATGEDVMRVVEGIIRRLWSTLMDTEAPSGPFRRLSYQD 351

Query: 282 AIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV-NPGYEVWAI------PAKGG 334
           A+ RYG+DKPD R  + ++ V EH +  +  + +KI  + NP  E++ I      PA   
Sbjct: 352 AMTRYGSDKPDTRYGMEIYRV-EHLLPVD--LINKITPLTNPIVEIFKINGNDNDPAAMS 408

Query: 335 GGNRAFCDR-----MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV 389
                F D       NE    +G PG+ +++   D    + G+ P          E +  
Sbjct: 409 EFITKFLDSPAGAPFNE--NPEGGPGI-FVY---DARKPLCGLQP----FGFQAAEYVEE 458

Query: 390 RLDMQDGDSCFFIAGDPLKFCSFAA---DARNHI---AQELGIINCNC-FEFCWIMDFPF 442
            ++   GD     A +   F   +    D R  +   A E G       F+F WI+DFP 
Sbjct: 459 IIEPDHGDLLVMQAREAAPFTGGSTPIGDLRRALYSAAVETGFKPAAVGFDFLWIVDFPL 518

Query: 443 YEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASG 494
           +  + + +        I   H+PFT P+   +  L   D   + A  YDLV NG E+  G
Sbjct: 519 FSPSTDSEPGQGGAAGISSTHHPFTAPKSAADVDLLLTDPTKVVADHYDLVVNGVELGGG 578

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
             R H + V      NV          F  L  A + G PPH G+A G DR+V ++LG  
Sbjct: 579 SRRIHDAAVQEFVLRNVLQMPPERLTEFSHLLEALRAGCPPHAGLALGFDRLVAVMLGKD 638

Query: 555 NVREVSLFPMSQNFC-DLLMGSPSTVSVEQLRELGLRIVEN 594
           +VR+V  FP +     D ++ +PS VS+E L+   LR+ + 
Sbjct: 639 SVRDVIAFPKTGKLGEDPMVKAPSPVSLEALKTYHLRLTDE 679


>gi|134058591|emb|CAK44627.1| unnamed protein product [Aspergillus niger]
          Length = 690

 Score =  242 bits (617), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 196/606 (32%), Positives = 295/606 (48%), Gaps = 62/606 (10%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDH-YGIT-QVVANPDSACFEIAKSVRSEWVLCID 74
           G  V L G++ +    G  + F  + DH  G T Q+++N  S      K +     + + 
Sbjct: 88  GQSVLLHGYLDKRDDMGKELSFARLYDHTMGRTIQLLSNSQSNTLPQLKKISRGSPVVVQ 147

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELP--LPVFGER-EYPESIRFKYRFL 131
           G V  R  +T         +E++ + I+ L+   E P  + +FG+   +P     K+R L
Sbjct: 148 GTVKRRVTKTAEEER-NDYLEIALESIQPLN---EFPREIVLFGKNIVHPP----KHRHL 199

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAEN----FIECSTPILTASSPEGARDFLVPSRVN 187
            LR D   ++ + R R      CR   E     F+E  TP+L  S+PEGAR+F+VP+R  
Sbjct: 200 QLRSDKELRDAL-RFRAQARNVCRETLEQLKPAFVEIETPLLFKSTPEGAREFIVPTR-K 257

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           +G  YALPQ+PQQYKQ+LMASG  RYFQ A CFRDED R+DR P EF QLD+EM+F    
Sbjct: 258 RGKAYALPQSPQQYKQILMASGIPRYFQFARCFRDEDLRADRQP-EFTQLDLEMAFAAGQ 316

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
           D++  +E ++RG++         S  F R+ Y +A+ RYG+DKPD R+ + +H V EH +
Sbjct: 317 DVMAVVEEIIRGLWGNMMREPVPSGPFRRMTYQEAMTRYGSDKPDTRHGMEIHRV-EHLL 375

Query: 308 HSEFRVFSKILSV-NPGYEVWAIPA--KGGGGNRAFCDRMNEWARS-------QGQPGLA 357
            ++  + SKI  + +P  E + +    +     R F  R  +            G PG+ 
Sbjct: 376 PAD--LVSKITPLTDPIVEAFKMDTVEQLPSATREFVSRFFDSTEGVPFNKNPDGAPGI- 432

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA---- 413
           +I+   DE   + G+GP    L     E I+  LD+  GD     A     F   A    
Sbjct: 433 FIY---DEGQPLKGLGP----LGFEAAEKIQEMLDLSHGDLLILQARPQGPFAGGATQLG 485

Query: 414 ----ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTMP 462
               A A   I++EL       FEF WI+DFP +   +  +        +   H+PFT P
Sbjct: 486 SIRRAMAAASISEELREAPPG-FEFLWIVDFPLFSPADASEPGQGGTAGLSATHHPFTAP 544

Query: 463 QGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVEN 520
           +   +  L   D     A  YDLV NG E+  G  R H +      F  +  + KE ++ 
Sbjct: 545 KTSSDVDLLSKDPTKALADHYDLVVNGVELGGGSRRIHCALTQNYIFKEILKMPKERIDE 604

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTV 579
            F  L  A   G PPH G A G DR++ ++LG ++VR+V  FP + +   D ++ +P   
Sbjct: 605 -FQHLLNALWAGCPPHAGFALGFDRLITVMLGKESVRDVIAFPKIGKKGEDAMVKAPGVC 663

Query: 580 SVEQLR 585
            + + R
Sbjct: 664 IIRKSR 669


>gi|71024657|ref|XP_762558.1| hypothetical protein UM06411.1 [Ustilago maydis 521]
 gi|46101951|gb|EAK87184.1| hypothetical protein UM06411.1 [Ustilago maydis 521]
          Length = 779

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 195/675 (28%), Positives = 300/675 (44%), Gaps = 103/675 (15%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAK 63
           RTH+CG+L        V L+GW+   R     + F  I DH G  Q+  +   A   +  
Sbjct: 90  RTHTCGELRTLHDKQQVVLTGWLQSSRQVSKQLGFFTIFDHTGSIQLKVHRTEASPLLLD 149

Query: 64  SVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPL----PVF 115
           S  S   +  + I G V  R      A+  TG IE+  + + +L+ A ++LP      + 
Sbjct: 150 SFSSIPLQSAILIRGKVARRPTHDSKADQSTGAIEVLPESLTLLNPATKDLPFQPSDSIH 209

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
            +    E +R +YR+LDLRR +L +NI  R+RI +++R  +    F+E  TP+L +S+PE
Sbjct: 210 ADGVSSE-LRARYRYLDLRRPSLAENIRLRSRITHAIRNHLYDNGFLEIETPVLLSSTPE 268

Query: 176 GARDFLVPSRVNQGS-------FYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRS 227
           GAR+FLVP+R++  S       FYALPQ+PQQ KQLL+ASG  D+YFQIA CFRDED R 
Sbjct: 269 GAREFLVPTRLSSSSNAQAEPHFYALPQSPQQPKQLLIASGVTDKYFQIAKCFRDEDGRK 328

Query: 228 DRLPGEFYQLDMEMSFVE---------------------------------QDDILNTME 254
           DR P EF Q+D+EM FV                                     + + +E
Sbjct: 329 DRQP-EFTQIDLEMGFVSGGPEAESTSSLTCDADADADADARDAQGHWRIGGQQVRDVIE 387

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
            ++  V+     G +V + F  + Y  A+ RYG+DKPDLR    +H+V+  F        
Sbjct: 388 GLIAHVWRAAGRG-SVPHRFPVMSYWTAMTRYGSDKPDLRYGYTLHDVSSGFKPCSESDV 446

Query: 315 SKILSVNPGYEVWAIPAKGGGG--------------------NRAFCDRMNEWARSQGQP 354
           +K+ + +   E+        G                       +  D ++E A    + 
Sbjct: 447 AKLDATSVSLEILPYQHHAAGSLSKKELERLLLPFKGKVERFRISSKDNIHELAALLLKK 506

Query: 355 GLAYIFWRLDESGNVAGMGPV-AKHLNIVNTEAIRVRLDMQDGDSCFFI-----AGDPLK 408
                 +   E GN   +  V  +HL      AI       D      I     +  P  
Sbjct: 507 SALTRQFLQKEFGNDVSVSEVDVEHLAQTLRAAIEAEARSDDSSEPVDIFVSLRSNPPEG 566

Query: 409 FCSFAADARNHIAQEL---GIINCNCFEFCWIMDFPFYEWNEEEK-----------KIDF 454
             +   + R  +A  L    ++  +     WI +FP +   +++K           +   
Sbjct: 567 GSTPLGEVRKLVAASLCDKKLLTMSGDALAWITEFPLFTLADDDKNALSLQCSSSRRWQS 626

Query: 455 AHNPFTMP--------QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           +H+PFT P         GG  +L  + + SI+   YDLV NG EI  G +R H   +   
Sbjct: 627 SHHPFTAPVASDIAMLLGG--NLDASSIASIRGQHYDLVLNGQEIGGGSVRIHSRALQQC 684

Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             +++       + RF  L  A  CG PPH GIA G DR++ +L   +++R+V  FP   
Sbjct: 685 VLAHILELTPSEQARFSHLLHALDCGAPPHAGIALGFDRLMAILCRTESIRDVIAFPKQG 744

Query: 567 NFCDLLMGSPSTVSV 581
           +  D L  SP+ ++ 
Sbjct: 745 SGIDPLFRSPAPLTA 759


>gi|312214535|emb|CBX94526.1| similar to aspartyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 683

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 176/493 (35%), Positives = 252/493 (51%), Gaps = 52/493 (10%)

Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R L LR D+ L  NI  R R   + R  +   N +E  TPIL  S+PEGAR+FLVP+R  
Sbjct: 215 RHLQLRADSRLRNNIFLRDRAGRAARKVLAENNLVEVETPILFKSTPEGAREFLVPTR-Q 273

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           +G  YALPQ+PQQYKQ+LMASG  +YFQ A CFRDED R+DR P EF QLDMEM+F  ++
Sbjct: 274 KGLAYALPQSPQQYKQILMASGITKYFQFARCFRDEDLRADRQP-EFTQLDMEMAFAGEE 332

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
           D++NT+E +L  ++++   G ++   F R+ Y++A+  YG+DKPDLR             
Sbjct: 333 DVMNTIELLLADLWDKMDLG-SIPTKFQRMTYEEAMSSYGSDKPDLR------------Y 379

Query: 308 HSEFRVFSKILSV-NPGYEVWAIPAKGG-GGNRAFC-------DRMNEWARSQGQPGLAY 358
            ++  +  KI  + +P  E   IP        R F        D  N      GQPG+ +
Sbjct: 380 EAKANLIGKITPLQDPIVEAVKIPVSSDPKTTRKFVSSFLDSPDGKNFLENPNGQPGI-F 438

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA--GDPLKFCSFA--- 413
           I    D S  + G+GP+     +   EA+ V    ++G+     A    PL   S A   
Sbjct: 439 IG---DLSQPMQGLGPLGYQYVMEGPEALAV----ENGELLVLQARPNAPLSGGSTALGN 491

Query: 414 ---ADARNHIAQEL-GIINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTMP 462
              A  +  I+Q+L      + F F WI DFP +  + +              H+PFT P
Sbjct: 492 LRLALYKAAISQDLIEAPAADDFRFLWITDFPLFTPSNDSDPGQGGTAGFSSTHHPFTAP 551

Query: 463 QGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVEN 520
           +   +  L        KA  YD+V NG E+  G  R H + V    F ++  +  E +E+
Sbjct: 552 KTPADVELLLTAPEKAKAAHYDIVLNGVELGGGSRRIHNAAVQEFIFRDILKMKYERIED 611

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
            F  L    + G PPH GIA G DR++ ++ G ++VR+V +FP S    DLL+ SP+ V+
Sbjct: 612 -FRHLLDVLRSGCPPHAGIALGWDRLMAVMTGTESVRDVIVFPKSGKGEDLLVKSPNCVT 670

Query: 581 VEQLRELGLRIVE 593
            EQ     L + E
Sbjct: 671 REQWDTYHLSVKE 683


>gi|190344765|gb|EDK36510.2| hypothetical protein PGUG_00608 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 687

 Score =  241 bits (615), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 188/643 (29%), Positives = 299/643 (46%), Gaps = 87/643 (13%)

Query: 16  DVGSFVRLSGWVHRV-RPHGGIIFLDIRDHYGIT-QVVANPDSA---CFEIAKSVRSEWV 70
           D    + L G ++R  R    I F ++RD  G T Q++  PD      F+I     +E  
Sbjct: 67  DNKDVIVLHGHLNRTPRIRSKISFAELRDVSGDTVQLILMPDRTPPEYFDILSKTSTEDS 126

Query: 71  LCIDGLVMSR---SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           +C+ G V  +   + E+    ++   I+L     E  +  ++L      +   P  +   
Sbjct: 127 ICVSGTVQLKKLVAGESRKWELVITSIQLLNSANEEAARLDKL------KHSDPNKLPPH 180

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVPSR 185
           YRFL LR   L KN+  R+++   +R  ++ E  NF E  TP+L  S+PEGAR+FLVP+R
Sbjct: 181 YRFLQLRTKELQKNLRTRSKMAAVVR-HVLGEKHNFTEIETPLLFKSTPEGAREFLVPTR 239

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            +   FYALPQ+PQQYKQ+LM+SGF RY+Q+A CFRDED R+DR P EF Q+D+EMSF+ 
Sbjct: 240 -SPNKFYALPQSPQQYKQILMSSGFTRYYQLAKCFRDEDLRADRQP-EFTQVDLEMSFIS 297

Query: 246 QDD-ILNTMENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAIRRYGT 288
             D +L  +E+V+ G+    ++                 N  S +F ++ Y  A+ +YG 
Sbjct: 298 HSDQVLCVVEDVIYGICNNVASKPVYTLNEDGYIIEAQKNGTSPSFYKLSYKSALEKYGI 357

Query: 289 DKPDLRNPIIMHNVTEHF----VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           DKPDLR+ +   N++ +F       EF +            + A   KG     A CD  
Sbjct: 358 DKPDLRSSLQFVNLSSYFKPVNCPDEFNI------------IEACILKGALAKCAHCDIP 405

Query: 345 NEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKH-----LNIVNTEAIRVRLDMQDGDSC 399
           +           A     +  S        + K      ++  + + +   L +++GD  
Sbjct: 406 DSLTNPDNYSRRAPSIIPITNSSATTWFETLTKDGVMVPVDSFDPQKLNESLGLEEGDII 465

Query: 400 F--------FIAGDPL-KFCSFA-ADARNHIAQEL-------GIINCNCFEFCWIMDFPF 442
                    +    PL +F + A A+  +   ++L        +   + F  CW+ DFP 
Sbjct: 466 AISNRSEHPYENPTPLGRFRNLAMAEYPDKWKRKLIDSSGNTSVPPSDAFVSCWVHDFPL 525

Query: 443 YEWNEEEK------------KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
           +  +EE                +  H+PFTM +    SL  +D        YDLV NG E
Sbjct: 526 FSPSEENSGSNDLYPKYNWDHRESTHHPFTMVKSEDYSLLESDPYLAHGEHYDLVINGVE 585

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           +  G  R H   V       V +  +   + FG L  A   G PPH G+A G DR+  ++
Sbjct: 586 VGGGSRRIHNPLVQQYVLEEV-LKIKNYNSLFGHLLEALSFGCPPHAGLALGFDRLCAMV 644

Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +G +++R+V  FP +Q+  D ++ SPS V  E L +  ++ ++
Sbjct: 645 VGTQSIRDVIAFPKNQSGVDPVVSSPSNVDSETLADYYIQTID 687


>gi|295093804|emb|CBK82895.1| Aspartyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 240

 Score =  241 bits (614), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 117/237 (49%), Positives = 158/237 (66%), Gaps = 5/237 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR  +  ++   DVG  ++++GWV  +R HGG+ F+D+RD YG+ QVV    S    I K
Sbjct: 7   YRNRTMNEITEGDVGQTLKVAGWVENIRDHGGVSFIDLRDMYGVLQVVMRDTSLLDGITK 66

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPE 122
               E  + I+G++  R  ET N  I TG IEL A+ +EIL  V +++P  +   +E  E
Sbjct: 67  ----EDCVSIEGIIEHRDEETYNPKIPTGTIELEAKTVEILGKVYKQIPFEIQTSKETRE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  N++ R+++I+ +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 123 DVRLKYRYLDLRNKKVKDNMIFRSQVISYLRQKMTEMGFLEIQTPILCASSPEGARDYIV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           PSR  +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGE   L +
Sbjct: 183 PSRKFKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGESTSLTL 239


>gi|226291546|gb|EEH46974.1| aspartyl-tRNA synthetase, mitochondrial [Paracoccidioides
           brasiliensis Pb18]
          Length = 703

 Score =  240 bits (613), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 190/583 (32%), Positives = 287/583 (49%), Gaps = 65/583 (11%)

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA--------ETINANIITGQIELSAQK 100
           QV+A   +  FE  KS+ +   + + G+V  + A        E  N+N+    IE++ + 
Sbjct: 141 QVIAFAKNKSFEKLKSIEANSSVVVQGIVQQKQANSKEKAAGERDNSNV--DSIEIALED 198

Query: 101 IEILSVAEELPLPVFGERE--YPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRM- 156
           I  L+   E P  +    E  +P     + R L +R D+ L   +  R R  N +R  + 
Sbjct: 199 IYCLN---EFPKDIIMTSETIFPA----EKRHLQIRADSNLRGALQFRARARNVLRETLE 251

Query: 157 -IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
                F+E  TP+L  S+PEGAR+FLVP+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q
Sbjct: 252 DFQPPFLEIETPLLFKSTPEGAREFLVPTR-RRGLAYALPQSPQQYKQILMASGIHRYYQ 310

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            A CFRDED R+DR P EF QLD+EMSF   +D++  +E  ++ ++           +F 
Sbjct: 311 FARCFRDEDLRADRQP-EFTQLDLEMSFATGEDVMKIIEAAMKRLWSTLMRAPLTPESFP 369

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGG 334
           R  Y++A+ +YG+DKPD+R  + +  + EH +  +  + SKI  + NP  E   +   G 
Sbjct: 370 RTTYENAMAKYGSDKPDVRIGMEIKRI-EHMIPVD--LVSKISPLNNPIVEAMKLEGNGD 426

Query: 335 GGN-----RAFCDR-MNEWARS--QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386
                    +F D   + W  +  +G PG A+++   D    ++G+ P         T  
Sbjct: 427 SDEMRKFLTSFMDSPTSSWFHNNPEGGPG-AFVY---DSRKPLSGLQP----FGFEATWV 478

Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL--GIINCN------CFEFCWIM 438
           +   L+++DGD     A +   F   +    N + +E+    +  N       F F W+ 
Sbjct: 479 LEQELNLKDGDLLLIQARNNAPFSGSSTPLGN-LRREIHRAAVEANFTPAPTGFHFLWVT 537

Query: 439 DFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFE 490
            FP +    + +        I   H+PFT P    + SL   D   + A  YDLV NG E
Sbjct: 538 GFPLFSPVSDSEPGQGGAAGITSTHHPFTAPLHESDISLLLTDPTKVVADHYDLVLNGVE 597

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +  G  R H + V  Q F    I K  VE    F  L  A + G PPH GIA G DR+V 
Sbjct: 598 LGGGSRRIHSAAV--QDFILRDILKMPVERLADFAHLLEALRAGCPPHAGIALGFDRLVA 655

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           ++LG ++VR+V  FP S    DLL+  PS ++ + LR   L +
Sbjct: 656 VMLGRESVRDVIAFPKSGKGEDLLVKCPSEITEDSLRTYHLSL 698


>gi|87304128|ref|ZP_01086677.1| Aspartyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87281458|gb|EAQ73519.1| Aspartyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 406

 Score =  240 bits (613), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 141/412 (34%), Positives = 222/412 (53%), Gaps = 19/412 (4%)

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 1   YVLPSRVCGGDWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDVRADRQP-EFTQLDI 59

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ ++ IL   E+++  +++    G  +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 60  EMSFMGEEQILQLNEDLICAIWKSV-KGIELPRPFPRMTWHDAMERYGTDRPDTRYGMEL 118

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-----NEWARSQGQP 354
             V++      F+VFS  +      +V A+P    GGN A  +       + ++ +Q   
Sbjct: 119 VTVSDIVQDMGFKVFSGAVKSGGAVKVIAVP----GGNDALSNVRIKPGGDVFSEAQAAG 174

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
                F R+ + G +  +G +  +L+      +  R     G    F AG+         
Sbjct: 175 AGGLAFIRVRDGGEIDTIGAIKDNLSDEQKAELLERTGATPGTLLLFGAGETAIVNKALD 234

Query: 415 DARNHIAQELGIINCN----CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGM 466
             R ++A+EL ++  +     + F W++DFP +E+N +E + +  H+PF  P     G  
Sbjct: 235 RVRQYLAKELKLVQPDRQNDAWNFLWVVDFPMFEFNGDEDRYEALHHPFCAPNTDDLGSD 294

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
            +     L S +A  YDLV NG E+  G +R H S +  Q    VG+  E  + +FG L 
Sbjct: 295 PAQWATTLPSARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQEQFGFLI 354

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
            A   G PPHGG+A GIDR+VMLL G +++R+   FP +Q    L+  +PS+
Sbjct: 355 NALDMGAPPHGGLAFGIDRMVMLLAGEESIRDTIAFPKTQQARCLMTDAPSS 406


>gi|189202468|ref|XP_001937570.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187984669|gb|EDU50157.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 633

 Score =  240 bits (613), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 173/489 (35%), Positives = 256/489 (52%), Gaps = 35/489 (7%)

Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R L LR D  L +N++ R+  +   R  + A  + E  TPIL  S+PEGAR+FLVP+R  
Sbjct: 156 RHLQLRTDNMLRQNLILRSEAMAKARLHLNAHMWKEIETPILFKSTPEGAREFLVPTR-Q 214

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           +G  YALPQ+PQQYKQ+LMASG  +Y+Q A CFRDED R DR P EF QLDMEM+F  ++
Sbjct: 215 KGLAYALPQSPQQYKQILMASGITKYYQFARCFRDEDLRVDRQP-EFTQLDMEMAFAGEE 273

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
           +++  +E +L+ V++  +N  T+   F R+ Y +A+  YG+DKPDLR    +H +T+H  
Sbjct: 274 EVMEEIEQLLKEVWQHVNN-VTLRGKFQRMTYHEAMTSYGSDKPDLRFESKIHEITQHLT 332

Query: 308 HSEFRVFSKILSV-NPGYEVWAIP-AKGGGGNRAFC-------DRMNEWARSQGQPGLAY 358
                +  KI S+ NP  +   I  ++     R F        D       + GQPG+  
Sbjct: 333 SD---LIGKITSLQNPAIDAIKISISEDPKVTRKFIASFLDSPDGKPYLDNADGQPGI-- 387

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR----LDMQDGDSCFFIAGDPLKFCSFAA 414
             +  D S  + G+GP+     +   E++ V     L +Q   +  F  G  +      A
Sbjct: 388 --FIGDLSQPMQGLGPLGYQYVMEGPESLAVENGDVLVLQARPNAPFSGGSTMLGNLRLA 445

Query: 415 DARNHIAQELGIINCNC-FEFCWIMDFPFYEWNEE-------EKKIDFAHNPFTMPQGGM 466
             +  IAQ L     N  ++F WI DFP +  + +       E      H+PFT P+   
Sbjct: 446 LHKAAIAQGLMTAPENSDYKFVWITDFPLFTPSSDSEPGQGGEAGFSSTHHPFTAPKTPE 505

Query: 467 E-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGG 524
           +  L   D  + KA  YD+V NG E+  G  R H + V    F ++  +  E VE+ F  
Sbjct: 506 DVELLLTDPSAAKAAHYDIVVNGVELGGGSRRIHSAAVQEFIFKDILKMKPERVED-FRH 564

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L    + G PPH GIA G DR++ +L   ++VR+V  FP S    DLL+ SP+ ++ +QL
Sbjct: 565 LLDVLRSGCPPHAGIALGWDRLMAVLCHRESVRDVIAFPKSGKGEDLLVKSPTRMTEDQL 624

Query: 585 RELGLRIVE 593
               L++ E
Sbjct: 625 STYHLQVKE 633


>gi|291336619|gb|ADD96165.1| hypothetical protein [uncultured organism MedDCM-OCT-S05-C185]
          Length = 238

 Score =  240 bits (612), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 113/226 (50%), Positives = 155/226 (68%)

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
           G GP+A  ++    E ++ R  M DGD+ FF AG   +    A +AR  +  +  +I  N
Sbjct: 11  GRGPIASRISSDVLETLKGRTGMGDGDAIFFSAGKETEAAKLAGNARLKLGVDQELIEQN 70

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
            ++FCW++DFP +E +E   KI+F+HNPF+MPQGG+E+L+  D L I AFQYD+VCNG E
Sbjct: 71  IYKFCWVVDFPMFEKDEVTGKIEFSHNPFSMPQGGLEALETKDPLDILAFQYDIVCNGIE 130

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           ++SG IRNH+ +VM++AFS  G SKE VE RF G+  AF+ G PPHGG A GIDRIVML+
Sbjct: 131 LSSGAIRNHLPDVMIKAFSIAGYSKEEVEERFSGMLNAFRYGAPPHGGFAPGIDRIVMLI 190

Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
               N+REV LFPM+Q   DL+M +PS VS++QL+EL ++    PK
Sbjct: 191 ANEPNIREVILFPMNQKAEDLMMNAPSEVSMQQLKELHIKSNLTPK 236


>gi|260946821|ref|XP_002617708.1| hypothetical protein CLUG_03152 [Clavispora lusitaniae ATCC 42720]
 gi|238849562|gb|EEQ39026.1| hypothetical protein CLUG_03152 [Clavispora lusitaniae ATCC 42720]
          Length = 672

 Score =  240 bits (612), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 201/654 (30%), Positives = 306/654 (46%), Gaps = 90/654 (13%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHR-VRPHGGIIFLDIRDHYG-ITQVVANPD---SACFE 60
           TH+  DL        V + G ++R  R      F ++RD  G I Q+   P+      FE
Sbjct: 35  THNVKDLQ-KPTSDQVTVHGHLNRKPRIMAKRSFAELRDPNGDIIQIYMAPEVTNEKYFE 93

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-------EELPLP 113
             +   +E  + + G V  +  +    +    Q+EL     + L+ A       ++L   
Sbjct: 94  RLEKSGAEDSVSVTGYVQEKKGKDDRPDA-PKQLELVVSHFQTLNPAGVEAGRLDKL--- 149

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTA 171
              +   P  +  KYRFL LR     K +  R++ +N +R R++ EN  F+E  TP+L  
Sbjct: 150 ---KHSNPSELPPKYRFLQLRTPFYQKTLRLRSKAVNEVR-RVLVENHDFVEIETPLLFK 205

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           S+PEGAR+FLVP+R     FYALPQ+PQQYKQ+LM+SGF RYFQIA CFRDED R+DR P
Sbjct: 206 STPEGAREFLVPTRA-PDRFYALPQSPQQYKQILMSSGFTRYFQIARCFRDEDLRADRQP 264

Query: 232 GEFYQLDMEMSFVEQ--------DDILNTMENVLRG------------VFEEFSNGNTVS 271
            EF Q+D+EMSFV          DDI+ ++ N + G            V  +F N +   
Sbjct: 265 -EFTQVDLEMSFVNHTDQVSTVIDDIIQSVWNKVGGLPIYKVDDDGTMVEVDFENHDHSK 323

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS----EFRVFSKILSVNPGYEVW 327
             F ++ Y +A+ +YG DKPDLR+ +   ++++HF  +    +F V    + +   ++  
Sbjct: 324 PAFNKLSYIEALSKYGIDKPDLRSALAFLDISKHFKPTKNTKDFGVVEACV-LKGAFD-- 380

Query: 328 AIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM--GPVAKHLNIVNTE 385
             P K      A  D +N   R   +P +  I    D            V K     ++E
Sbjct: 381 --PEKPFKVPHALTDSINYPKR---KPIVLAIKTEEDTVSWYEKFVDKNVLKPTENFSSE 435

Query: 386 AIRVRLDMQDGDSCFFIA--------GDPL-KFCSFA----ADARNHIAQELGIINCN-- 430
            +   L++Q GD   F            PL KF   A     +  N      G +  +  
Sbjct: 436 DLEKTLNLQPGDILAFSTRAELPYENPTPLGKFRQLAIEQFPNKWNRPILRNGKVTTDYD 495

Query: 431 ---CFEFCWIMDFPFY------EWNEEE------KKIDFAHNPFTMPQGGMESLKGNDLL 475
               F   W++DFP +      + N+ E       +++  H+PFTM +     L   D L
Sbjct: 496 RNSTFVGSWLVDFPLFSPVEVSDSNDTEFPVYDMSQLEATHHPFTMAKSEDYELLATDPL 555

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            +    YDLV NG E+  G  R H  E+    F ++ +     EN FG L +A   G PP
Sbjct: 556 KVHGEHYDLVINGVEVGGGSRRVHDPELQKYIFESI-LKINNYENLFGHLLKALSMGCPP 614

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           H GIA G DR+  +L+G+ ++R+V  FP +Q+  D ++ SP+ V    L +  +
Sbjct: 615 HAGIALGFDRLCAMLVGSASIRDVIAFPKNQSGTDPVVESPTDVPDSTLHQYNI 668


>gi|330936724|gb|EGH40909.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 379

 Score =  240 bits (612), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 143/385 (37%), Positives = 216/385 (56%), Gaps = 10/385 (2%)

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +QIA CFRDED R+DR P EF Q+D+E SF+ ++DI+   E ++R +F+E  +      +
Sbjct: 1   YQIAKCFRDEDLRADRQP-EFTQIDIETSFLNEEDIIGLTEKMVRQLFKEVLD--LEFGD 57

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           F  + +++A+RRYG+DKPDLRNP+ + +V +     EF+VFS   + +P   V A+   G
Sbjct: 58  FPHMTFEEAMRRYGSDKPDLRNPLELVDVADQLTGVEFKVFSGPAN-DPKGRVAALRVPG 116

Query: 334 GGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
                R+  D   ++    G  GLAYI       G      P+ K +   N   I  R+ 
Sbjct: 117 AASMARSQIDDYTKFVSIYGAKGLAYIKVNERAKGPEGLQSPIVKFIPEDNLNVILDRVG 176

Query: 393 MQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK 451
             DGD  FF A D  K  S A  A R  I  +L +  C  +   W++DFP +E N++   
Sbjct: 177 AADGDIVFFGA-DKFKIVSEALGALRIKIGNDLKLHTCE-WAPMWVVDFPMFEENDD-GS 233

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
               H+PFT P+   E L+ N   ++ +  YD+V NG E+  G IR H  E+    F  +
Sbjct: 234 FTALHHPFTAPKCTPEELEANPATAL-SRAYDMVLNGTELGGGSIRIHRKEMQQAVFRLL 292

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI+++  + +FG L  A + G PPHGG+A G+DR+VML+ GA+++REV  FP +Q+  D+
Sbjct: 293 GIAEDEQQEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAADV 352

Query: 572 LMGSPSTVSVEQLRELGLRIVENPK 596
           +  +P  V  + LREL +R+ E PK
Sbjct: 353 MTQAPGVVDAKALRELHIRLREQPK 377


>gi|296390678|ref|ZP_06880153.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 387

 Score =  240 bits (612), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 141/392 (35%), Positives = 215/392 (54%), Gaps = 8/392 (2%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           M +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF+++ DI+   E ++R +F+E  
Sbjct: 1   MVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSFLDESDIIGITEKMVRQLFKEVL 59

Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
           +     + F  + +++A+RRYG+DKPDLR P+ + +V +     EF+VFS   + +P   
Sbjct: 60  D--VEFDEFPHMPFEEAMRRYGSDKPDLRIPLELVDVADQLKEVEFKVFSGPAN-DPKGR 116

Query: 326 VWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
           V A+   G     R+  D   ++    G  GLAYI       G      P+ K +   N 
Sbjct: 117 VAALRIPGAASMPRSQIDDYTKFVGIYGAKGLAYIKVNERAKGVEGLQSPIVKFIPEANL 176

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYE 444
             I  R+   DGD  FF A      C      R  +  +L ++    +   W++DFP +E
Sbjct: 177 NVILDRVGAVDGDIVFFGADKAKIVCDALGALRIKVGHDLKLL-AREWAPMWVVDFPMFE 235

Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
            N++   +   H+PFT P+     L+ N   ++ +  YD+V NG E+  G IR H   + 
Sbjct: 236 QNDD-GSLSALHHPFTSPKCTPAELEANPGAAL-SRAYDMVLNGTELGGGSIRIHDKSMQ 293

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              F  +GI +   E +FG L  A + G PPHGG+A G+DR+VML+ GA ++REV  FP 
Sbjct: 294 QAVFRVLGIDEAEQEEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGASSIREVIAFPK 353

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +Q+  D++  +P +V  + LREL +R+ E PK
Sbjct: 354 TQSAGDVMTQAPGSVDGKALRELHIRLREQPK 385


>gi|114565518|ref|XP_001149903.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 1
           [Pan troglodytes]
          Length = 548

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 158/473 (33%), Positives = 252/473 (53%), Gaps = 28/473 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  + 
Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMK 340

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           + ++++ F ++E       LS   G  +   IP       R   + + ++A       + 
Sbjct: 341 IIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQEIL 400

Query: 358 YIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +F   + + N     PVA   +     E IR+ ++ Q+ D     AG+  K CS     
Sbjct: 401 PVFLNANRNWN----SPVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKL 455

Query: 417 RNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQ 463
           R   A  L   G++  +   F F W++DFP +   EE  ++++ AH+PFT P 
Sbjct: 456 RLECADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPH 508


>gi|239611007|gb|EEQ87994.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 643

 Score =  238 bits (607), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 176/497 (35%), Positives = 255/497 (51%), Gaps = 54/497 (10%)

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDFLV 182
           R L +R D+  ++ ++ R R  N +R     C++    FIE  TP+L  S+PEGAR+FLV
Sbjct: 137 RHLQIRADSKLRDALRFRARARNVLREALEECQL---PFIEIETPLLFKSTPEGAREFLV 193

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMS
Sbjct: 194 PTR-RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMS 251

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +D++  +E  ++ ++      +  S +F R  Y+DA+ ++G+DKPD+R  + +  +
Sbjct: 252 FATGEDVITVIEAAVKKLWSSLMTHSLPSESFQRTTYEDAMAKFGSDKPDVRIGMEIKRI 311

Query: 303 TEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARS----------Q 351
            EH V  +  + SKI  + NP  E  A+  +G        + +N +  S           
Sbjct: 312 -EHMVPVD--LVSKISPLHNPIVE--AMKLEGNENPEDMRNFLNSFMDSPEASIFHKNPA 366

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G PG A+++   D    ++G+ P         T  +   LD++DGD     A +   F  
Sbjct: 367 GGPG-AFVY---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARENAPFSG 418

Query: 412 FAA---DARNHI---AQELGIINCNC-FEFCWIMDFPFYEWNEEEKK-------IDFAHN 457
            +    D R  I   A E  +      F F W+ +FP +    + +        I   H+
Sbjct: 419 GSTPLGDLRREIHKAAVEADLTPAPTGFHFLWVQEFPLFSPITDSEPGQGGAAGIASTHH 478

Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           PFT P    + SL   D   + A  YDLV NG E+  G  R H + V  Q F    I K 
Sbjct: 479 PFTAPLRESDISLLLTDPTKVIADHYDLVLNGVELGGGSRRIHSAAV--QEFILRDILKM 536

Query: 517 VVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
             E    F  L  A + G PPH GIA G DR+V ++LG ++VR+V  FP S    DLL+ 
Sbjct: 537 PAERLADFAHLLEALRAGCPPHAGIALGFDRLVAVMLGKESVRDVIAFPKSGKGEDLLIK 596

Query: 575 SPSTVSVEQLRELGLRI 591
            PS ++ E LR   LR+
Sbjct: 597 CPSEMTEESLRTYHLRL 613


>gi|255030603|ref|ZP_05302554.1| aspartyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 267

 Score =  237 bits (605), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 121/264 (45%), Positives = 170/264 (64%), Gaps = 3/264 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +       +
Sbjct: 64  DSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNTSKTPPFYIEDGVNVSD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LV
Sbjct: 124 ELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSN 266
           F+ +++I    E++L  V +E  N
Sbjct: 243 FLTKEEIQAITEDMLVDVVKEAKN 266


>gi|327350748|gb|EGE79605.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 750

 Score =  237 bits (605), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 176/497 (35%), Positives = 255/497 (51%), Gaps = 54/497 (10%)

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDFLV 182
           R L +R D+  ++ ++ R R  N +R     C++    FIE  TP+L  S+PEGAR+FLV
Sbjct: 244 RHLQIRADSKLRDALRFRARARNVLREALEECQL---PFIEIETPLLFKSTPEGAREFLV 300

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMS
Sbjct: 301 PTR-RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMS 358

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +D++  +E  ++ ++      +  S +F R  Y+DA+ ++G+DKPD+R  + +  +
Sbjct: 359 FATGEDVITVIEAAVKKLWSSLMTHSLPSESFQRTTYEDAMAKFGSDKPDVRIGMEIKRI 418

Query: 303 TEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARS----------Q 351
            EH V  +  + SKI  + NP  E  A+  +G        + +N +  S           
Sbjct: 419 -EHMVPVD--LVSKISPLHNPIVE--AMKLEGNENPEDMRNFLNSFMDSPEASIFHKNPA 473

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G PG A+++   D    ++G+ P         T  +   LD++DGD     A +   F  
Sbjct: 474 GGPG-AFVY---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARENAPFSG 525

Query: 412 FAA---DARNHI---AQELGIINCNC-FEFCWIMDFPFYEWNEEEKK-------IDFAHN 457
            +    D R  I   A E  +      F F W+ +FP +    + +        I   H+
Sbjct: 526 GSTPLGDLRREIHKAAVEADLTPAPTGFHFLWVQEFPLFSPITDSEPGQGGAAGIASTHH 585

Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           PFT P    + SL   D   + A  YDLV NG E+  G  R H + V  Q F    I K 
Sbjct: 586 PFTAPLRESDISLLLTDPTKVIADHYDLVLNGVELGGGSRRIHSAAV--QEFILRDILKM 643

Query: 517 VVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
             E    F  L  A + G PPH GIA G DR+V ++LG ++VR+V  FP S    DLL+ 
Sbjct: 644 PAERLADFAHLLEALRAGCPPHAGIALGFDRLVAVMLGKESVRDVIAFPKSGKGEDLLIK 703

Query: 575 SPSTVSVEQLRELGLRI 591
            PS ++ E LR   LR+
Sbjct: 704 CPSEMTEESLRTYHLRL 720


>gi|261206066|ref|XP_002627770.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239592829|gb|EEQ75410.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 803

 Score =  237 bits (605), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 176/497 (35%), Positives = 255/497 (51%), Gaps = 54/497 (10%)

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDFLV 182
           R L +R D+  ++ ++ R R  N +R     C++    FIE  TP+L  S+PEGAR+FLV
Sbjct: 297 RHLQIRADSKLRDALRFRARARNVLREALEECQL---PFIEIETPLLFKSTPEGAREFLV 353

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMS
Sbjct: 354 PTR-RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMS 411

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +D++  +E  ++ ++      +  S +F R  Y+DA+ ++G+DKPD+R  + +  +
Sbjct: 412 FATGEDVITVIEAAVKKLWSSLMTHSLPSESFQRTTYEDAMAKFGSDKPDVRIGMEIKRI 471

Query: 303 TEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARS----------Q 351
            EH V  +  + SKI  + NP  E  A+  +G        + +N +  S           
Sbjct: 472 -EHMVPVD--LVSKISPLHNPIVE--AMKLEGNENPEDMRNFLNSFMDSPEASIFHKNPA 526

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G PG A+++   D    ++G+ P         T  +   LD++DGD     A +   F  
Sbjct: 527 GGPG-AFVY---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARENAPFSG 578

Query: 412 FAA---DARNHI---AQELGIINCNC-FEFCWIMDFPFYEWNEEEKK-------IDFAHN 457
            +    D R  I   A E  +      F F W+ +FP +    + +        I   H+
Sbjct: 579 GSTPLGDLRREIHKAAVEADLTPAPTGFHFLWVQEFPLFSPITDSEPGQGGAAGIASTHH 638

Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           PFT P    + SL   D   + A  YDLV NG E+  G  R H + V  Q F    I K 
Sbjct: 639 PFTAPLRESDISLLLTDPTKVIADHYDLVLNGVELGGGSRRIHSAAV--QEFILRDILKM 696

Query: 517 VVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
             E    F  L  A + G PPH GIA G DR+V ++LG ++VR+V  FP S    DLL+ 
Sbjct: 697 PAERLADFAHLLEALRAGCPPHAGIALGFDRLVAVMLGKESVRDVIAFPKSGKGEDLLIK 756

Query: 575 SPSTVSVEQLRELGLRI 591
            PS ++ E LR   LR+
Sbjct: 757 CPSEMTEESLRTYHLRL 773


>gi|225679790|gb|EEH18074.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 578

 Score =  237 bits (604), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 189/583 (32%), Positives = 286/583 (49%), Gaps = 65/583 (11%)

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA--------ETINANIITGQIELSAQK 100
           QV+A   +  FE  KS+ +   + + G+V  + A        E  N+N+    IE++ + 
Sbjct: 16  QVIAFAKNKSFEKLKSIEANSPVVVQGIVQQKQANSKEKAAGERDNSNV--DSIEIALED 73

Query: 101 IEILSVAEELPLPVFGERE--YPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRM- 156
           I  L+   E P  +    E  +P     + R L +R D+ L   +  R R  N +R  + 
Sbjct: 74  IYCLN---EFPKDIIMTSETIFPA----EKRHLQIRADSNLRGALQFRARARNVLRETLE 126

Query: 157 -IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
                F+E  TP+L  S+PEGAR+FLVP+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q
Sbjct: 127 DFQPPFLEIETPLLFKSTPEGAREFLVPTR-RRGLAYALPQSPQQYKQILMASGIHRYYQ 185

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            A CFRDED R+DR P EF QLD+EMSF   +D++  +E  ++ ++           +F 
Sbjct: 186 FARCFRDEDLRADRQP-EFTQLDLEMSFATGEDVMKIIEAAMKRLWTTLMRAPLTPESFP 244

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGG 334
           R  Y++A+ +YG+DKPD+R  + +  + EH +  +  + SKI  + NP  E   +   G 
Sbjct: 245 RTTYENAMAKYGSDKPDVRIGMEIKRI-EHMIPVD--LVSKISPLNNPIVEAMKLEGNGD 301

Query: 335 GGN-----RAFCDR-MNEWARS--QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386
                    +F D   + W  +  +G PG A+++   D    ++G+ P         T  
Sbjct: 302 SDEMRKFLTSFMDSPTSSWFHNNPEGGPG-AFVY---DSRKPLSGLQP----FGFEATWV 353

Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL--GIINCN------CFEFCWIM 438
           +   L+++DGD     A +   F   +    N + +E+    +  N       F F W+ 
Sbjct: 354 LEQELNLKDGDLLLIQARNNAPFSGSSTPLGN-LRREIHRAAVEANFTPAPTGFHFLWVT 412

Query: 439 DFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFE 490
            FP +    + +        I   H+PFT P    + SL   D   + A  YDLV NG E
Sbjct: 413 GFPLFSPVSDSEPGQGGAAGITSTHHPFTAPLHESDISLLLTDPTKVVADHYDLVLNGVE 472

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +  G  R H + V  Q F    I K   E    F  L  A + G PPH GIA G DR+V 
Sbjct: 473 LGGGSRRIHSAAV--QDFILRDILKMPAERLADFAHLLEALRAGCPPHAGIALGFDRLVA 530

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           ++LG ++VR+V  FP S    DLL+  PS ++ + LR   L +
Sbjct: 531 VMLGRESVRDVIAFPKSGKGEDLLVKCPSEMTEDSLRTYHLSL 573


>gi|10434343|dbj|BAB14228.1| unnamed protein product [Homo sapiens]
          Length = 463

 Score =  237 bits (604), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 158/465 (33%), Positives = 246/465 (52%), Gaps = 25/465 (5%)

Query: 138 LHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           +  N+  R++++  MR   C +    F++  TP L   +P GA++FLVPSR   G FY+L
Sbjct: 1   MQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAKEFLVPSR-EPGKFYSL 57

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           PQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+EMSFV+Q  I + +E
Sbjct: 58  PQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIEMSFVDQTGIQSLIE 116

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
            +L+  +   ++ + V   F  + + + +  YGTDKPD R  + + ++++ F ++E    
Sbjct: 117 GLLQ--YSWPNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFGMKIIDISDVFRNTEIGFL 174

Query: 315 SKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMG 373
              LS   G  +   IP       R   + +  +A       +  +F   + + N     
Sbjct: 175 QDALSKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEILPVFLNANRNWN----S 230

Query: 374 PVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL---GII-- 427
           PVA   +     E IR+ ++ Q+ D     AG+  K CS     R   A  L   G++  
Sbjct: 231 PVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKLRLECADLLETRGVVLR 289

Query: 428 NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +   F F W++DFP +   EE  ++++ AH+PFT P      L   +    ++  YDLV 
Sbjct: 290 DPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTEPKKARSQHYDLVL 349

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           NG EI  G IR H +E  LQ +    + KE V+     L +A   G PPHGGIA G+DR+
Sbjct: 350 NGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALDYGAPPHGGIALGLDRL 406

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           + L+ G+ ++R+V  FP S    DL+  +P +V  E+L+   +R+
Sbjct: 407 ICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRV 451


>gi|254227127|ref|ZP_04920674.1| aspartyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125620351|gb|EAZ48738.1| aspartyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 252

 Score =  236 bits (602), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 121/254 (47%), Positives = 170/254 (66%), Gaps = 4/254 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD A  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++ LPL  F ++   E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLD-FNQKNSEEQ 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 -RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVL 257
           +  + +    E ++
Sbjct: 239 MTAEQVRAVTEKMI 252


>gi|295668186|ref|XP_002794642.1| aspartyl-tRNA synthetase, mitochondrial [Paracoccidioides
           brasiliensis Pb01]
 gi|226286058|gb|EEH41624.1| aspartyl-tRNA synthetase, mitochondrial [Paracoccidioides
           brasiliensis Pb01]
          Length = 685

 Score =  236 bits (602), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 189/583 (32%), Positives = 285/583 (48%), Gaps = 65/583 (11%)

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA--------ETINANIITGQIELSAQK 100
           QV+A   +  FE  KS+ +   + + G+V  + A        E  N+N+    IE++ + 
Sbjct: 123 QVIAFAKNISFEKLKSIEANSPVVVQGIVQQKQASSKEKAAGERDNSNV--DSIEIALED 180

Query: 101 IEILSVAEELPLPVF--GEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRM- 156
           I  L+   E P  +    E  +P     + R L +R D+ L   +  R R  N +R  + 
Sbjct: 181 IYCLN---EFPKDIIMTSETVFPA----EKRHLQIRADSNLRGALQFRARARNVLRETLE 233

Query: 157 -IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
                F+E  TP+L  S+PEGAR+FLVP+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q
Sbjct: 234 DFQPPFLEIETPLLFKSTPEGAREFLVPTR-RRGLAYALPQSPQQYKQILMASGIHRYYQ 292

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            A CFRDED R+DR P EF QLD+EMSF   +D++  +E  ++ ++           +F 
Sbjct: 293 FARCFRDEDLRADRQP-EFTQLDLEMSFATGEDVMKIIEAAMKRLWSTLMPAPLTPESFP 351

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGG 334
           R  Y++A+ +YG+DKPD+R  + +  + EH +  +  + SKI  + NP  E   +   G 
Sbjct: 352 RTTYENAMAKYGSDKPDVRIGMEIKRI-EHMIPVD--LVSKISPLNNPIVEAMKLEGNGD 408

Query: 335 GGN-----RAFCDR-MNEWARS--QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386
                    +F D   + W  +  +G PG A+++   D    ++G+ P         T  
Sbjct: 409 SDEMRKFLSSFMDSPTSSWFHNNPEGGPG-AFVY---DSRKPLSGLQP----FGFEATWV 460

Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL--GIINCN------CFEFCWIM 438
           +   L+++DGD     A +   F   +    N + +E+    +  N       F F W+ 
Sbjct: 461 LEQELNLKDGDLLLIQARNNAPFSGSSTPLGN-LRREIHRAAVEANFTPAPTGFHFLWVA 519

Query: 439 DFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFE 490
            FP +    + +        I   H+PFT P    + SL   D     A  YDLV NG E
Sbjct: 520 GFPLFSPVSDSEPGQGGAAGITSTHHPFTAPLHESDISLLLTDPTKAVADHYDLVLNGVE 579

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +  G  R H + V  Q F    I K   E    F  L  A + G PPH GIA G DR+V 
Sbjct: 580 LGGGSRRIHSAAV--QDFILRDILKMPAERLADFAHLLEALRAGCPPHAGIALGFDRLVA 637

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           ++LG ++VR+V  FP S    DLL+  PS ++ + LR   L +
Sbjct: 638 VMLGRESVRDVIAFPKSGKGEDLLVKCPSEMTEDSLRTYHLSL 680


>gi|225558824|gb|EEH07107.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 578

 Score =  236 bits (601), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 175/500 (35%), Positives = 257/500 (51%), Gaps = 54/500 (10%)

Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDFLV 182
           R L +R D+ L   ++ R R  N +R     C++    F+E  TP+L  S+PEGAR+FLV
Sbjct: 97  RHLQIRTDSKLRDALLFRARARNVLREVLEECQL---PFVEIETPLLFKSTPEGAREFLV 153

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMS
Sbjct: 154 PTR-RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMS 211

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +D++  +E  ++ ++    +    S +F R+ Y DA+ +YG+DKPD+R  + +  +
Sbjct: 212 FATGEDVMAIIEAAVKRLWSSLMSEPLPSGSFPRLSYGDAMAKYGSDKPDVRIGMEIKRI 271

Query: 303 TEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARS----------Q 351
            EH +  +  + SKI  + NP  E  AI  +G          +N +  S          +
Sbjct: 272 -EHMIPVD--LVSKISPLHNPIVE--AIKLEGNENPEEMRKFLNSFMDSPEASNFHKNPE 326

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G PG A+++   D    ++G+ P         T  +   LD++DGD     A     F  
Sbjct: 327 GGPG-AFVY---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARKNAPFSG 378

Query: 412 FAA---DARNHIAQ-ELG---IINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHN 457
            +    D R  I +  +G   I +   F F W+ DFP +    + +        I   H+
Sbjct: 379 GSTPLGDLRREIHKAAVGATLISSPTGFHFLWVRDFPLFSPITDSEPGQGGAAGIASTHH 438

Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           PFT P    + SL   D   + A  YDLV NG E+  G  R H + V  Q F    I K 
Sbjct: 439 PFTAPLRKSDVSLLLTDPTKVIADHYDLVVNGVELGGGSRRIHSAAV--QEFILRDILKM 496

Query: 517 VVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
             +    F  L  A + G PPH GIA G DR+V ++LG +++R+V  FP S    DLL+ 
Sbjct: 497 PADRLADFSHLLEALRAGCPPHAGIALGFDRLVAVMLGKESLRDVIAFPKSGKGEDLLVK 556

Query: 575 SPSTVSVEQLRELGLRIVEN 594
            PS ++ E LR   L++ ++
Sbjct: 557 CPSEMTEESLRTYHLQLRDD 576


>gi|255731071|ref|XP_002550460.1| hypothetical protein CTRG_04758 [Candida tropicalis MYA-3404]
 gi|240132417|gb|EER31975.1| hypothetical protein CTRG_04758 [Candida tropicalis MYA-3404]
          Length = 679

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 188/641 (29%), Positives = 308/641 (48%), Gaps = 100/641 (15%)

Query: 21  VRLSGWVHR---VRPHGGIIFLDIRDHYGIT-QVVANPD---SACFEIAKSVRSEWVLCI 73
           V L+G ++R   +RP  G  FL  RD  G   Q++A P+    + FE+ K +  E  + +
Sbjct: 57  VTLNGHINRKSRIRPALGFGFL--RDINGDEIQLLATPEFTNESIFELMKRLTVEDSVSV 114

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--PESIRFKYRFL 131
            G +  + ++         ++EL  +  +IL+ +  L      + ++  PE I  ++R+L
Sbjct: 115 SGFIQQKQSKNGKT-----ELELVVENFQILN-SSNLDASRLDKLKHNNPEDIPPQFRYL 168

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQG 189
            LR     K++  R++    +R  +  +N  F+E  TP+L  S+PEGAR+FLVP+R +  
Sbjct: 169 QLRTPYYQKSLRLRSQAAQLIR-EIFTKNHGFVEIETPLLFKSTPEGAREFLVPTR-SFN 226

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            FYALPQ+PQQYKQ+LM+SG  RYFQIA CFRDED RSDR P EF Q+D+EMSF+   D 
Sbjct: 227 KFYALPQSPQQYKQILMSSGITRYFQIAKCFRDEDLRSDRQP-EFTQIDLEMSFINNSDQ 285

Query: 250 LN-TMENVLRGVFEEFSNGNTVSNN------------------FLRICYDDAIRRYGTDK 290
           +   +E+V+  V+ +     T   N                  F ++ Y DA+ +YG DK
Sbjct: 286 VGIVVEDVVHNVWNKIGGKPTYKVNQDGYLEEITHEMGTNTLQFNKLNYIDALTKYGIDK 345

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKI------LSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           PDLR+ +   ++ + F   E   F  +       +  PG + + +P       ++F D  
Sbjct: 346 PDLRSSLTFTSLEDFFFAKENDEFPVVEISILKQAFKPGAKKYKLP-------KSFTDDH 398

Query: 345 NEWAR-----SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD-- 397
           N  AR     +  +P  A I+++     NV  + P     N  +   ++  L++Q GD  
Sbjct: 399 NFPARRPYIWAVNKPDDATIWYKKLMEANV--IAPT----NAFDETKLQNLLNLQPGDVF 452

Query: 398 ----SCFFIAGDP--------LKFCSFAADARNHIAQELGIINCNCFEFC----WIMDFP 441
                  F   +P        L    F    +  I ++  + + +  +      W+++FP
Sbjct: 453 AVSTRSKFPYENPTPLGKFRQLAIKEFPTKWQRPILKDGQLTSDHNIDDVVVGSWVVNFP 512

Query: 442 FYEWNE----------------EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
            +   E                +  K +  H+PFTM +     L  +D L ++   YDLV
Sbjct: 513 LFNPVEISDSPDNETTIKYPKYDYNKFESTHHPFTMAKIEDYELLESDPLKVRGEHYDLV 572

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
            NG E+  G  R H  ++    F  + +     +  FG L +A   G PPH G+A G DR
Sbjct: 573 INGVEVGGGSRRIHDPDLQQYIFEEI-LQISNFQELFGHLLKALSMGCPPHAGLALGFDR 631

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           +  +L+G+ ++R+V  FP +Q+  D ++ SP+ V  + L E
Sbjct: 632 LCAMLIGSNSIRDVIAFPKNQSGVDPVVESPTGVKEQTLNE 672


>gi|50289245|ref|XP_447053.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526362|emb|CAG59986.1| unnamed protein product [Candida glabrata]
          Length = 659

 Score =  235 bits (599), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 194/651 (29%), Positives = 304/651 (46%), Gaps = 118/651 (18%)

Query: 17  VGSFVRLSGWVHRV--RPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            G+ + L+GW+     R    +IF  +RD  G    + + +S    + +  + E V+ + 
Sbjct: 41  TGADIVLNGWIDSKPKRISKSLIFGQLRDSNGDRVQLVDTNS----LLRKCKVEDVVQVR 96

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY-PESIRFKYRFLDL 133
           G V  +  ET ++N+   + E+    ++ L+ A + P  +   R+  PE +  ++R++ L
Sbjct: 97  GKVQLKR-ETGSSNLDNKKFEVVVDHVKTLNAANKKPSELKELRDTSPELVPPEFRYIQL 155

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG---- 189
           R       +  R  +  ++R  +  + F E  TP L  ++PEGAR+F+VP+RV+      
Sbjct: 156 RTARYQNYLRTRYEVSKTLRQILDQDGFTEIETPTLFKATPEGAREFMVPTRVSAKIKQV 215

Query: 190 -----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                 FYAL Q+PQQYKQLLMASG  +YFQ A C+RDED R+DR P EF QLDMEMSF 
Sbjct: 216 DKIVPMFYALTQSPQQYKQLLMASGVPKYFQFARCYRDEDLRADRQP-EFTQLDMEMSFA 274

Query: 245 EQDDILNTMENVLRGVFEEFSNGN---------------TVSNNFLRICYDDAIRRYGTD 289
            Q D+++ +E  +  V+++F                   T ++N  R+ Y +A+  YG D
Sbjct: 275 SQKDVMSVIEKCITSVWKKFRTKESTGLLTLDRNHSLTPTDASNLYRMTYKEAMTNYGID 334

Query: 290 KPDLRNPII-MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           KPDLR P + + N+ E   +S         ++NP + ++ I        +AF D+ N++ 
Sbjct: 335 KPDLRAPSLRILNMKELGAYS---------NINPAFPIFEIMI----IKKAFTDK-NDYK 380

Query: 349 RSQGQPGLAYIFWRLDESGNVAG--MGPVAKHLNIVN-----------------TEAIRV 389
           +        + F   D++ N     + P++  L   N                  +AIR+
Sbjct: 381 KK-------WSFLSNDDNYNYRKPIVVPISTDLETKNWYEKFMRIASFENTHMLNKAIRL 433

Query: 390 RL-DMQDG-----DSCFFIAGDPLKFCSFAADARNHIAQELG----IINCNCFEFCWIMD 439
            + D+  G     D+  F    PL        AR  I Q       +   N     W++D
Sbjct: 434 EVGDIVVGSNREIDTRIFENPTPL------GRARQLILQNNETKDIVRETNKDVAVWVVD 487

Query: 440 FPFYEWNE---------------EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF---- 480
           FP     E               E++ +   H+PFTM Q     L+  D L+        
Sbjct: 488 FPLLSPKETEIKNTKHKEMYPIYEDRTVISTHHPFTMVQ-----LQDYDKLTTNPIDCLG 542

Query: 481 -QYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLYRAFQCGMPPHGG 538
             YDLV NG E+  G  R H  E+    F NV  IS   +   FG L  AF+ G PPH G
Sbjct: 543 QHYDLVMNGIELGGGSTRIHDPELQKFMFENVLKISNYQI--LFGHLLSAFETGTPPHAG 600

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            A G DR+  +L G  ++R+V  FP S    DL++ SPST++ + LR+  +
Sbjct: 601 FAIGYDRMCAMLCGTDSIRDVIPFPKSITGSDLVVQSPSTIAEDILRDYKI 651


>gi|149244654|ref|XP_001526870.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146449264|gb|EDK43520.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 697

 Score =  235 bits (599), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 185/636 (29%), Positives = 300/636 (47%), Gaps = 91/636 (14%)

Query: 29  RVRPHGGIIFLDIRDHYG-ITQVVANPDS----ACFEIAKSVRSEWVLCIDGLV------ 77
           R+RP  G  FL  RD  G + Q +A+ D+       E  K +  E  + I G        
Sbjct: 65  RIRPTVGFGFL--RDQEGDVIQFIADADNNEHQLVLEKMKKLTVEDSISITGYAKPKVGK 122

Query: 78  ---------MSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRF 126
                    M+  + T +A+      EL  + ++IL+ +  +   L    + + PE I  
Sbjct: 123 EQGRQEETAMATRSRTEDASKKPKAWELVVKDLQILNSSNLDASRLEKLKQTD-PEDIPP 181

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDFLVPSR 185
           ++R+L LR       +  R++I   +R  ++   +F+E  TP+L  S+PEGAR+FLVP+R
Sbjct: 182 QFRYLQLRTKFFQSALRTRSKIAQLVRNTLVNNHDFVEIETPLLFKSTPEGAREFLVPTR 241

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                FYALPQ+PQQYKQ+LMASGF RYFQ+A CFRDED R+DR P EF Q+D+EMS++ 
Sbjct: 242 T-YDQFYALPQSPQQYKQILMASGFTRYFQLAKCFRDEDLRADRQP-EFTQVDLEMSYIN 299

Query: 246 Q-DDILNTMENVLRGVFEEFSNGNT--------------VSNN---FLRICYDDAIRRYG 287
             + I+  +E+V+  ++ +  N  T              + NN   F ++ Y +A+ +YG
Sbjct: 300 SAEQIMKVVEDVVMNIWLKICNRPTYTLNEKGFLQKLTDIDNNKVQFSKLAYPEALLKYG 359

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-NE 346
            DKPDLR+ I    + E F+  E   FS +       E   +       N++  +++  E
Sbjct: 360 IDKPDLRSDITFITLDEFFIGEENSEFSVV-------EACVLRNALDNENKSSKNKLPKE 412

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVA-----KHLNIVNTEAIRVRLDMQDGD---- 397
              +          W +    ++     +      K  N  + + ++  L+++ GD    
Sbjct: 413 LTSTHNYSRRRPYVWAIRNDKDLLWYEKLVEKKFMKKTNHFDEKKLKTILNLKPGDILAI 472

Query: 398 --SCFFIAGDP--------LKFCSFAADARNHIAQELG-IINCNCFEF----CWIMDFPF 442
                F   +P        L    F    +  I +E G ++N   FE      W++DFP 
Sbjct: 473 STRSKFPYENPTPLGKFRQLAIKEFPGKWQRPIEKESGELVNDYKFEDMVVGSWVVDFPL 532

Query: 443 YEWNE------------EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
           +   E               K +  H+PFTM +     L G++ L ++   YDLV NG E
Sbjct: 533 FNPVEISSSTEDPYPEYSMNKYESTHHPFTMCKSEDYELMGSNPLQVRGEHYDLVINGVE 592

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           +  G  R H   +    F  + +  +  +  FG L +A   G PPH G+A G DR+  ++
Sbjct: 593 VGGGSRRIHDPALQKYVFEEI-LQIKHYDQLFGHLLKALSMGCPPHAGLALGFDRLCAMV 651

Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           +G+ ++R+V  FP +Q+  DL++ SP+ V  + L E
Sbjct: 652 VGSSSIRDVIAFPKNQSGKDLVVESPTEVLEKALNE 687


>gi|167860683|gb|ACA05124.1| aspartyl-tRNA synthetase [Flammeovirga yaeyamensis]
          Length = 239

 Score =  235 bits (599), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 120/240 (50%), Positives = 160/240 (66%), Gaps = 7/240 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFE 60
           RTH+CG+L  S +G  V LSGW   +R  GG+I++DIRD YGITQ+V     N D+A  E
Sbjct: 3   RTHNCGELRESHIGQTVTLSGWAQAIRDKGGLIWIDIRDRYGITQLVIEDDGNADAALLE 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ V  E+VL   G V+ R+A+  N NI TG IE+   ++ IL+ A+  P  +  E + 
Sbjct: 63  QARKVGREFVLKATGEVIERAAK--NPNIPTGNIEMRLSELTILNEAQTPPFKIEDETDG 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LD+RR+ + + +V R +I   +R  +  + FIE  TP+L  S+PEGARDF
Sbjct: 121 GDELRMKYRYLDIRRNPVREKLVLRHKIAQEVRRYLSDQEFIEVETPVLIKSTPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQ+PQ +KQLLM  G DRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 181 LVPSRMNPGEFYALPQSPQTFKQLLMVGGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 239


>gi|148707384|gb|EDL39331.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_c [Mus
           musculus]
          Length = 547

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 160/476 (33%), Positives = 250/476 (52%), Gaps = 36/476 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++CG+L  S +G  V L GW+   R +    FL +RD +G+ Q++   D    E A S
Sbjct: 69  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDCHGLVQILIPQD----ESAAS 121

Query: 65  VRS-------EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           VR        E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  +   
Sbjct: 122 VRRILCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDF 181

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSP 174
            +  E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P
Sbjct: 182 VKKTEALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTP 239

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            GA++FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF
Sbjct: 240 GGAKEFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EF 297

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            Q+D+EMSFVEQ  I   +E +L+  +    + + +   F  + + +A+  YGTDKPD R
Sbjct: 298 TQIDIEMSFVEQTGIQRLVEGLLQ--YSWPGDKDPLVTPFPSMTFAEALATYGTDKPDTR 355

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQG 352
             + + +V++ F ++E R     L+  P   V AI    G     +   + + ++A    
Sbjct: 356 FGMKIVDVSDVFRNTELRFLQDALA-KPQGTVKAICVHDGAKYLRKEDIEFIRKFAVHHF 414

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              +  IF  L+   N +   P AK +       +   +++Q+ D     AG+  K CS 
Sbjct: 415 SQEVLPIF--LNAKKNWS--SPFAKFIMEEERLELARSMEIQEEDIVLLTAGEHEKACSL 470

Query: 413 AADARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMP 462
               R   A  L      + +   F F W++DFP +   EE   +++ AH+PFT P
Sbjct: 471 LGKLRLECADLLEMRGAVLRDPAVFSFLWVVDFPLFLAKEESPTELESAHHPFTAP 526


>gi|68488367|ref|XP_711972.1| hypothetical protein CaO19.4478 [Candida albicans SC5314]
 gi|68488418|ref|XP_711947.1| hypothetical protein CaO19.11958 [Candida albicans SC5314]
 gi|46433295|gb|EAK92741.1| hypothetical protein CaO19.11958 [Candida albicans SC5314]
 gi|46433323|gb|EAK92768.1| hypothetical protein CaO19.4478 [Candida albicans SC5314]
          Length = 698

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 190/640 (29%), Positives = 301/640 (47%), Gaps = 92/640 (14%)

Query: 21  VRLSGWVHR---VRPHGGIIFLDIRDHYGI-TQVVANP---DSACFEIAKSVRSEWVLCI 73
           V L+G VHR   +RP  G  FL  RD  G   Q++A P   + + FE+ K +  E  + +
Sbjct: 70  VTLNGHVHRKSRIRPTLGFAFL--RDTNGDEIQLLATPKYTEPSIFELMKKLTIEDSVSV 127

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--PESIRFKYRFL 131
            G +  + +++        Q EL  +  +IL+ +  L      + ++  P  I  ++R+L
Sbjct: 128 SGFIQPKESKSGKEQ----QWELVVENFQILN-SSNLDAAQLDKLKHNNPRDIPPQFRYL 182

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGS 190
            LR     K++  R+     +R   I  + F+E  TP+L  S+PEGAR+FLVP+R +   
Sbjct: 183 QLRTPYYQKSLRLRSEAARLIRDIFIKNHKFVEIETPLLFKSTPEGAREFLVPTR-SFNK 241

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           FYALPQ+PQQYKQ+LM+SGF RYFQ+A CFRDED RSDR P EF Q+D+EMSFV   D +
Sbjct: 242 FYALPQSPQQYKQILMSSGFTRYFQVAKCFRDEDLRSDRQP-EFTQIDLEMSFVNNSDQV 300

Query: 251 N-TMENVLRGVFEEFSNGNTVSNN------------------FLRICYDDAIRRYGTDKP 291
              +E+V+  V+ +     T   N                  F ++ Y D + +YG DKP
Sbjct: 301 GIVVEDVIHNVWNKVGGKLTYKVNDEGFLVEADLAEVGKSLQFSKLNYIDVLVKYGIDKP 360

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFS--KILSVNPGYEV----WAIPAKGGGGNRAFCDRMN 345
           DLR+ +   ++ + F+  E   F   ++  +   ++     + +P      +     R  
Sbjct: 361 DLRSNLSFISLEDFFIAKENADFPVVEVCVLKGAFDASSGKYKLPKSFINDHNFSSRRPY 420

Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCF----- 400
            WA  +      Y F +L ++  +A         N  +   ++  L++Q GD        
Sbjct: 421 VWAIQRNDDTFGY-FKKLIDANIIATT-------NTFDESKLQELLNLQPGDILAVSTRA 472

Query: 401 ---FIAGDPL-KFCSFAADARNH-----IAQELGIINC-----NCFEFCWIMDFPFYEWN 446
              + +  PL KF   A +   H     I  E G ++      +     W+++FP +   
Sbjct: 473 KFPYESPTPLGKFRQLAIEEFPHKWQRPIVMENGQLSVDYDRNDIVVGSWVVNFPLFNPV 532

Query: 447 EEE--------------------KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           EE                     KK +  H+PFTM +     L  +D L ++   YDLV 
Sbjct: 533 EESGQTSHVTEESSKPKYPVYNFKKFESTHHPFTMAKIEDYDLLESDPLKVRGEHYDLVI 592

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           NG E+  G  R H   +    F  + +     +  FG L +A   G PPH G+A G DR+
Sbjct: 593 NGVEVGGGSRRIHDPALQQYIFEEI-LQISNFQQLFGHLLKALSMGCPPHAGLALGFDRL 651

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
             +L+G+ ++R+V  FP +Q+  D ++ SP+ V    L E
Sbjct: 652 CAMLMGSTSIRDVIAFPKNQSGVDPVVESPTGVKEATLNE 691


>gi|213619157|ref|ZP_03372983.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 252

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 119/254 (46%), Positives = 168/254 (66%), Gaps = 4/254 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVL 257
           +    +   ME ++
Sbjct: 239 MTAPQVREVMEALV 252


>gi|148707383|gb|EDL39330.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b [Mus
           musculus]
          Length = 506

 Score =  234 bits (597), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 160/479 (33%), Positives = 250/479 (52%), Gaps = 36/479 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++CG+L  S +G  V L GW+   R +    FL +RD +G+ Q++   D    E A S
Sbjct: 28  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDCHGLVQILIPQD----ESAAS 80

Query: 65  VRS-------EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           VR        E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  +   
Sbjct: 81  VRRILCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDF 140

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSP 174
            +  E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P
Sbjct: 141 VKKTEALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTP 198

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            GA++FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF
Sbjct: 199 GGAKEFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EF 256

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            Q+D+EMSFVEQ  I   +E +L+  +    + + +   F  + + +A+  YGTDKPD R
Sbjct: 257 TQIDIEMSFVEQTGIQRLVEGLLQYSWP--GDKDPLVTPFPSMTFAEALATYGTDKPDTR 314

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQG 352
             + + +V++ F ++E R     L+  P   V AI    G     +   + + ++A    
Sbjct: 315 FGMKIVDVSDVFRNTELRFLQDALA-KPQGTVKAICVHDGAKYLRKEDIEFIRKFAVHHF 373

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              +  IF  L+   N +   P AK +       +   +++Q+ D     AG+  K CS 
Sbjct: 374 SQEVLPIF--LNAKKNWS--SPFAKFIMEEERLELARSMEIQEEDIVLLTAGEHEKACSL 429

Query: 413 AADARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGG 465
               R   A  L      + +   F F W++DFP +   EE   +++ AH+PFT P   
Sbjct: 430 LGKLRLECADLLEMRGAVLRDPAVFSFLWVVDFPLFLAKEESPTELESAHHPFTAPNSS 488


>gi|260201701|ref|ZP_05769192.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289444110|ref|ZP_06433854.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289417029|gb|EFD14269.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T46]
          Length = 260

 Score =  234 bits (596), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 125/259 (48%), Positives = 168/259 (64%), Gaps = 5/259 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANP-DSAC 58
           M   R+H+ G L   D G  V L+GWV R R HGG+IF+D+RD  GI QVV  +P D+  
Sbjct: 1   MFVLRSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEV 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
              A  +R+E+ + + G+V  R     N  I TG+IE++A  + +L   E  PLP   + 
Sbjct: 61  LAQAHRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLG--ECAPLPFQLDE 118

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R KYR+LDLRRD     I  R+R+  + R  +   +F+E  TP +T S+PEGAR
Sbjct: 119 PAGEELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGAR 178

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD
Sbjct: 179 DFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLD 237

Query: 239 MEMSFVEQDDILNTMENVL 257
           MEMSFV+ +DI+   E VL
Sbjct: 238 MEMSFVDAEDIIAISEEVL 256


>gi|154275552|ref|XP_001538627.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150415067|gb|EDN10429.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 680

 Score =  234 bits (596), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 175/500 (35%), Positives = 256/500 (51%), Gaps = 54/500 (10%)

Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDFLV 182
           R L +R D+ L   ++ R R  N +R     C++    F+E  TP+L  S+PEGAR+FLV
Sbjct: 192 RHLQIRTDSKLRHALLFRARARNVLREALEECQL---PFVEIETPLLFKSTPEGAREFLV 248

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMS
Sbjct: 249 PTR-RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMS 306

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +D++  +E  ++ ++    +    S +F R+ Y DA+ +YG+DKPD+R  + +  +
Sbjct: 307 FATGEDVMAIIEAAVKRLWSSLMSEPLPSGSFPRLSYGDAMAKYGSDKPDVRIGMEIKRI 366

Query: 303 TEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARS----------Q 351
            EH +  +  + SKI  + NP  E  AI  +G          +N +  S          +
Sbjct: 367 -EHMIPVD--LVSKISPLHNPIVE--AIKLEGNENPEEMRKFLNSFMDSPEASSFHKNPE 421

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G PG A+++   D    ++G+ P         T  +   LD++DGD     A     F  
Sbjct: 422 GGPG-AFVY---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARKNAPFSG 473

Query: 412 FAA---DARNHIAQ-ELG---IINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHN 457
            +    D R  I +  +G   I +   F F W+ DFP +    + +        I   H+
Sbjct: 474 GSTPLGDLRREIHKAAVGATLISSPTGFHFLWVRDFPLFSPITDSEPGQGGAAGIASTHH 533

Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           PFT P    + SL   D   + A  YDLV NG E+  G  R H + V  Q F    I K 
Sbjct: 534 PFTAPLRKSDVSLLLTDPTKVIADHYDLVVNGVELGGGSRRIHSAAV--QEFILRDILKM 591

Query: 517 VVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
             +    F  L  A + G PPH GIA G DR+V ++LG  ++R+V  FP S    DLL+ 
Sbjct: 592 PADRLADFSHLLDALRAGCPPHAGIALGFDRLVAVMLGKDSLRDVIAFPKSGKGEDLLVK 651

Query: 575 SPSTVSVEQLRELGLRIVEN 594
            PS ++ E LR   L++ ++
Sbjct: 652 CPSEMTEESLRTYHLQLRDD 671


>gi|7022598|dbj|BAA91658.1| unnamed protein product [Homo sapiens]
          Length = 463

 Score =  233 bits (594), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 157/465 (33%), Positives = 245/465 (52%), Gaps = 25/465 (5%)

Query: 138 LHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           +  N+  R++++  MR   C +    F++  TP L   +P GA++FLVPSR   G F +L
Sbjct: 1   MQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAKEFLVPSR-EPGKFCSL 57

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           PQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+EMSFV+Q  I + +E
Sbjct: 58  PQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIEMSFVDQTGIQSLIE 116

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
            +L+  +   ++ + V   F  + + + +  YGTDKPD R  + + ++++ F ++E    
Sbjct: 117 GLLQ--YSWPNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFGMKIIDISDVFRNTEIGFL 174

Query: 315 SKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMG 373
              LS   G  +   IP       R   + +  +A       +  +F   + + N     
Sbjct: 175 QDALSKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEILPVFLNANRNWN----S 230

Query: 374 PVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL---GII-- 427
           PVA   +     E IR+ ++ Q+ D     AG+  K CS     R   A  L   G++  
Sbjct: 231 PVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKLRLECADLLETRGVVLR 289

Query: 428 NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +   F F W++DFP +   EE  ++++ AH+PFT P      L   +    ++  YDLV 
Sbjct: 290 DPTLFSFLWVVDFPLFLPKEESPRELESAHHPFTAPHPSDIHLLYTEPKKARSQHYDLVL 349

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           NG EI  G IR H +E  LQ +    + KE V+     L +A   G PPHGGIA G+DR+
Sbjct: 350 NGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALDYGAPPHGGIALGLDRL 406

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           + L+ G+ ++R+V  FP S    DL+  +P +V  E+L+   +R+
Sbjct: 407 ICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRV 451


>gi|148707382|gb|EDL39329.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_a [Mus
           musculus]
          Length = 526

 Score =  233 bits (594), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 158/474 (33%), Positives = 243/474 (51%), Gaps = 53/474 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++CG+L  S +G  V L GW+   R +    FL +RD +G+ Q++   D    E A S
Sbjct: 69  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDCHGLVQILIPQD----ESAAS 121

Query: 65  VRS-------EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           VR        E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  +   
Sbjct: 122 VRRILCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDF 181

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSP 174
            +  E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P
Sbjct: 182 VKKTEALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTP 239

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            GA++FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF
Sbjct: 240 GGAKEFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EF 297

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            Q+D+EMSFVEQ  I   +E +L+  +    + + +   F  + + +A+  YGTDKPD R
Sbjct: 298 TQIDIEMSFVEQTGIQRLVEGLLQ--YSWPGDKDPLVTPFPSMTFAEALATYGTDKPDTR 355

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354
             + + +V++ F ++E R     L            AK  G  +A C             
Sbjct: 356 FGMKIVDVSDVFRNTELRFLQDAL------------AKPQGTVKAIC----------VHD 393

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           G   +   L+   N +   P AK +       +   +++Q+ D     AG+  K CS   
Sbjct: 394 GAEVLPIFLNAKKNWSS--PFAKFIMEEERLELARSMEIQEEDIVLLTAGEHEKACSLLG 451

Query: 415 DARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMP 462
             R   A  L      + +   F F W++DFP +   EE   +++ AH+PFT P
Sbjct: 452 KLRLECADLLEMRGAVLRDPAVFSFLWVVDFPLFLAKEESPTELESAHHPFTAP 505


>gi|150866285|ref|XP_001385831.2| aspartyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149387541|gb|ABN67802.2| aspartyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 668

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 190/631 (30%), Positives = 304/631 (48%), Gaps = 95/631 (15%)

Query: 29  RVRPHGGIIFLDIRDHYG-ITQVVANPD---SACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           R+RP   + F +IRD  G  TQ++  P    S  F++ K+   E  + + G V  +  + 
Sbjct: 51  RIRPE--LSFAEIRDSNGDCTQILLTPQTTSSKLFDLLKTTTVEDAVSVTGHVQLKKMKP 108

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREY--PESIRFKYRFLDLRRDTLHKNI 142
            +A   T + EL    ++IL+ +  L      + ++  PE +  ++R+L LR       +
Sbjct: 109 GDA---TREWELVVDNLQILN-SSNLDAARLDKLKHSNPEQLPPQFRYLQLRTKFYQNAL 164

Query: 143 VKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
             R+++   +R  +  EN  F E  TP+L  S+PEGAR+FLVP+R +   FYALPQ+PQQ
Sbjct: 165 KTRSKVAMLIR-NIFTENHEFTEIETPLLFKSTPEGAREFLVPTR-SPDKFYALPQSPQQ 222

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ--------DDILNT 252
           YKQ+LM+SGF RYFQIA CFRDED R+DR P EF Q+D+EM++V          +D+++ 
Sbjct: 223 YKQILMSSGFTRYFQIAKCFRDEDLRADRQP-EFTQVDLEMAYVNNCDQVGVVVEDLIHN 281

Query: 253 MENVLR----------GVFEEFSNGNTVSN---NFLRICYDDAIRRYGTDKPDLRNPIIM 299
           + N +R          G  E     +T  N   +F ++ Y DA+ +YG DKPDLR+ +  
Sbjct: 282 VWNRIRNISTYRVNEQGYLEAIDFDSTKPNSSLHFGKLKYIDALCKYGIDKPDLRSKLEF 341

Query: 300 HNVTEHFVHS-----EFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARS--- 350
            N++E F+ S     +F V    + +   +E    P+KG     R+  D ++   R    
Sbjct: 342 VNLSELFIPSSTNNGQFPVLEACI-LKKAFE----PSKGKYKLPRSLIDPLSYTRRKPIV 396

Query: 351 ---QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA---- 403
              Q +      + +  E    +     ++H        ++  LD++ GD   F      
Sbjct: 397 IPIQDENDATNWYKKFIEKKVFSEAATFSEH-------KLQASLDLEAGDILAFSTRAEL 449

Query: 404 --GDPLKFCSFAADARNHIAQEL---------GIIN-----CNCFEFCWIMDFPFY---- 443
              +P     F   A N   ++          G I+        F   W+++FP +    
Sbjct: 450 PYENPTPLGKFRQLAINEFPEKWNREIYDKSSGTISEVKDTSAIFVGSWVVEFPLFSPVE 509

Query: 444 ---EWNEEEKKIDF-----AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
                N +  + DF      H+PFTM +     L     L ++   YDLV NG E+  G 
Sbjct: 510 ISSSSNNDFPEYDFTSFESTHHPFTMAKHEDYDLLETAPLKVRGEHYDLVINGVEVGGGS 569

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            R H +E+    F N+ ++     + FG L  A   G PPH G+A G DR+  +LLG+ +
Sbjct: 570 RRIHDAELQKFVFKNI-LNITNYNDLFGHLLHALSMGCPPHAGLALGFDRLCAMLLGSAS 628

Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           +R+V  FP +Q+  D ++ SP++VS   L +
Sbjct: 629 IRDVIAFPKNQSGFDPVVESPTSVSESTLNQ 659


>gi|241948653|ref|XP_002417049.1| aspartyl-tRNA synthetase, mitochondrial [Candida dubliniensis CD36]
 gi|223640387|emb|CAX44638.1| aspartyl-tRNA synthetase, mitochondrial [Candida dubliniensis CD36]
          Length = 683

 Score =  232 bits (592), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 194/640 (30%), Positives = 299/640 (46%), Gaps = 93/640 (14%)

Query: 21  VRLSGWVHR---VRPHGGIIFLDIRDHYGIT-QVVANP---DSACFEIAKSVRSEWVLCI 73
           V L+G VHR   +RP  G  FL  RD  G   Q++A P   + + FE+ K +  E  + +
Sbjct: 56  VTLNGHVHRKSRIRPALGFAFL--RDTNGDEIQLLATPKYTEPSIFELMKKLTVEDSVSV 113

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--PESIRFKYRFL 131
            G V  + ++         Q EL  +  +IL+ +  L      + ++  P++I  ++R+L
Sbjct: 114 TGFVQPKESKMGKDQ----QWELVVEDFQILN-SSNLDAAQLDKLKHNSPQNIPPQFRYL 168

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
            LR     K++  R+     +R   I   +F+E  TP+L  S+PEGAR+FLVP+R +   
Sbjct: 169 QLRTPYYQKSLRLRSEAAKVIRNIFIENHDFVEIETPLLFKSTPEGAREFLVPTR-SFNK 227

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           FYALPQ+PQQYKQ+LM+SGF RYFQ+A CFRDED RSDR P EF Q+D+EMSFV   D +
Sbjct: 228 FYALPQSPQQYKQILMSSGFTRYFQVAKCFRDEDLRSDRQP-EFTQIDLEMSFVNNSDQV 286

Query: 251 N-TMENVLRGVFEEFSNGNTVSNN------------------FLRICYDDAIRRYGTDKP 291
              +E+V+  V+ +     T   N                  F ++ Y DA+ +YG DKP
Sbjct: 287 GIVVEDVIHNVWNKVGGKPTYKVNDEGFLEKVDLAEAGKSLQFNKLNYIDALVKYGIDKP 346

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN------ 345
           DLR+ +   ++ + FV  E   F  ++ V    E +   +      + F D  N      
Sbjct: 347 DLRSNLSFISLEDIFVAKENADFP-VVEVCVLKEAFDASSGKYKLPKTFIDDHNFSSRRP 405

Query: 346 -EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD------S 398
             WA  +     +Y F +L ++  +A         +  +   ++  L++Q GD       
Sbjct: 406 YVWAIQKNDDTFSY-FKKLIDANIIATT-------DKFDESKLQELLNLQPGDILAVSTR 457

Query: 399 CFFIAGDPL---KFCSFAADARNHIAQELGIIN---------CNCFEFCWIMDFPFYEWN 446
             F   +P    KF   A +   H  Q   I N          +     W+++FP +   
Sbjct: 458 AQFPYENPTPLGKFRQLAIEEFPHKWQRPIIENGQLSVDYDRNDMVVGSWVVNFPLFNPV 517

Query: 447 EEE--------------------KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           EE                     KK +  H+PFTM +     L   + L +    YDLV 
Sbjct: 518 EESSLISSATQENLKPKYPLYNFKKFESTHHPFTMAKIEDYDLLETNPLKVHGEHYDLVI 577

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           NG E+  G  R H   +    F  + +     +  FG L +A   G PPH G+A G DR+
Sbjct: 578 NGVEVGGGSRRIHDPALQQYIFEEI-LQISNFQQLFGHLLKALSMGCPPHAGLALGFDRL 636

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
             +L+G+ ++R+V  FP +Q+  D ++ SP+ V    L E
Sbjct: 637 CAMLVGSPSIRDVIAFPKNQSGVDPVVESPTGVKEATLNE 676


>gi|240281700|gb|EER45203.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 637

 Score =  232 bits (592), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 174/500 (34%), Positives = 257/500 (51%), Gaps = 54/500 (10%)

Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDFLV 182
           R L +R D+ L   ++ R R  N +R     C++    F+E  TP+L  S+PEGAR+FLV
Sbjct: 156 RHLQIRTDSKLRDALLFRARARNVLREALEECQL---PFVEIETPLLFKSTPEGAREFLV 212

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMS
Sbjct: 213 PTR-RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMS 270

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +D++  +E  ++ ++    +    S +F R+ Y DA+ +YG+DKPD+R  + +  +
Sbjct: 271 FATGEDVMAIIEAAVKRLWSSLMSEPLPSGSFPRLSYGDAMAKYGSDKPDVRIGMEIKRI 330

Query: 303 TEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARS----------Q 351
            E+ +  +  + SKI  + NP  E  AI  +G          +N +  S          +
Sbjct: 331 -ENMIPVD--LVSKISPLHNPIVE--AIKLEGNENPEEMRKFLNSFMDSPEASSFHKNPE 385

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G PG A+++   D    ++G+ P         T  +   LD++DGD     A     F  
Sbjct: 386 GGPG-AFVY---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARKNAPFSG 437

Query: 412 FAA---DARNHIAQ-ELG---IINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHN 457
            +    D R  I +  +G   I +   F F W+ DFP +    + +        I   H+
Sbjct: 438 GSTPLGDLRREIHKAAVGATLISSPTGFHFLWVRDFPLFSPITDSEPGQGGAAGIASTHH 497

Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           PFT P    + SL   D   + A  YDLV NG E+  G  R H + V  Q F    I K 
Sbjct: 498 PFTAPLRKSDVSLLLTDPTKVIADHYDLVVNGVELGGGSRRIHSAAV--QEFILRDILKM 555

Query: 517 VVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
             +    F  L  A + G PPH GIA G DR+V ++LG +++R+V  FP S    DLL+ 
Sbjct: 556 PADRLADFSHLLEALRAGCPPHAGIALGFDRLVAVMLGKESLRDVIAFPKSGKGEDLLVK 615

Query: 575 SPSTVSVEQLRELGLRIVEN 594
            PS ++ E LR   L++ ++
Sbjct: 616 CPSEMTEESLRTYHLQLRDD 635


>gi|255715569|ref|XP_002554066.1| KLTH0E13530p [Lachancea thermotolerans]
 gi|238935448|emb|CAR23629.1| KLTH0E13530p [Lachancea thermotolerans]
          Length = 673

 Score =  232 bits (592), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 189/617 (30%), Positives = 287/617 (46%), Gaps = 89/617 (14%)

Query: 21  VRLSGWVHRVRPHG---GIIFLDIRDHYG-ITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V ++GW+ + +P     G+IF  +RD  G + Q+V +       + KS   E V+ ++G 
Sbjct: 85  VVINGWIDK-KPRSVGKGLIFSTLRDTEGDLIQLVDHKS-----LLKSASVEDVVQVEGH 138

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG---EREYPESIRFKYRFLDL 133
           +  + +     +    Q EL    I  L+ + + P  + G   +  YP     ++R+L L
Sbjct: 139 LALKES---RGDSDPAQYELRVLNINTLNKSSKKPSQLLGFKIQESYPP----EFRYLQL 191

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG---S 190
           R       + KR +I  ++R  +  + F+E  TP+L  S+PEGAR+FLVP+R  Q    +
Sbjct: 192 RLPKYQNFLQKRHQIAQNIRELLNLQGFLEVETPVLFKSTPEGAREFLVPARNKQDGKPT 251

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           FYALPQ+PQQYKQLLMASG  +Y+Q A CFRDED RSDR P EF Q+D+EM+F   D I+
Sbjct: 252 FYALPQSPQQYKQLLMASGIQKYYQFARCFRDEDLRSDRQP-EFTQVDLEMAFASGDKIM 310

Query: 251 NTMENVLRGVFEEFSNG---NTVSNNFL-----------RICYDDAIRRYGTDKPDLRNP 296
           + +E+ +   + +FS+     TV  N L           R+ Y  A+  YG DK     P
Sbjct: 311 HVVEDTMVSTWNKFSSSEALQTVDKNGLLVAVTGSQPVSRMSYKTAMTHYGIDK-----P 365

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI-----PAKGGGGNRAFCDRMNEWARSQ 351
            +     +    SEF+   K   + P +EV  +       +    N AF    NE     
Sbjct: 366 DLRFRDLKIVDMSEFKARGKENILFPVFEVLILRNAFSTVEEYHKNWAFLS--NEHNYRY 423

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD----------SCFF 401
             P +  +     E        P+A   +  N   +   L+++ GD          S  F
Sbjct: 424 RTPIVVPVETEELERSWFEKFLPIA---DFENPTLMARFLNLKKGDIVCGSTRQPTSAIF 480

Query: 402 IAGDPL----KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNE---------- 447
               PL    +    +   +    +  G +        W++DFP +   E          
Sbjct: 481 ENPTPLGRLRQLAIQSPYGKKLYQKSEGAVAT------WVVDFPLFSPVEREVVGKETKQ 534

Query: 448 -----EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
                E  K+   H+PFTM Q    +      LS     YD V NG E+  G  R H  E
Sbjct: 535 LYPVYESDKVTSTHHPFTMVQLDDLAKLSKAPLSCAGQHYDFVLNGVELGGGSTRIHDPE 594

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +    F ++   KE  E  FG L  AF+ G PPH G+A G DR+V ++ G++N+R+V  F
Sbjct: 595 LQKYVFKDILKIKEP-EKLFGHLLTAFENGTPPHAGLAIGFDRMVAMICGSENIRDVIAF 653

Query: 563 PMSQNFCDLLMGSPSTV 579
           P S +  DL++GSPS++
Sbjct: 654 PKSVSGADLVVGSPSSI 670


>gi|289615759|emb|CBI57500.1| unnamed protein product [Sordaria macrospora]
          Length = 644

 Score =  232 bits (592), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 193/641 (30%), Positives = 299/641 (46%), Gaps = 83/641 (12%)

Query: 18  GSFVRLSGWVHRVR-PHGGIIFLDIRDHYGIT-QVVA------NPDSACFEIAKSVRSEW 69
           G+ V + G++ R R     ++F DI+   G + QV A      +P+    +  ++V    
Sbjct: 15  GTRVTVHGFLQRRRVKSSKLVFADIQVENGPSVQVTATFKEDGSPEQLATKALRAVPLYS 74

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR-FKY 128
            +C+ G V   +   ++ N+   Q  L+A   +I+ V+E +        ++P S R  + 
Sbjct: 75  PVCVTGTVAQLNGSRVDLNLDAIQ-PLNAFPKDII-VSEGV--------QFPASARHLQI 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           RF     D L   ++ R +I   +R  +   +F E  TPIL  S+PEGAR+FLVP+R  +
Sbjct: 125 RF----SDPLRSRLLARPQIGFQLRKTLNDLDFTEVETPILFKSTPEGAREFLVPTR-RR 179

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G  YALPQ+PQQYKQ+LM+SG   Y+Q A CFRDED R+DR P EF QLDMEM F   +D
Sbjct: 180 GLAYALPQSPQQYKQILMSSGIRGYYQFARCFRDEDLRADRQP-EFTQLDMEMGFATGED 238

Query: 249 ILNTMENVLRGVFEE---------------------FSNGNTVSNN----------FLRI 277
           ++ T+E ++  +                         +NG ++ +           FLR+
Sbjct: 239 VMRTVETLVTELLPALNAQFNIVKSGDDIYPVPKRGLNNGESIEDGDIKWPEPTAPFLRL 298

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI-PAKGG-- 334
            YD+A+ R+G DKPDLR P   H V EH + ++F V     +  P  EV+ I P   G  
Sbjct: 299 TYDEAMTRFGIDKPDLRIPFEFHRV-EHILPAQF-VSMITHTEQPIVEVFRIRPQLDGEI 356

Query: 335 ---GGNRAFCDR-MNEWARSQGQ-PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV 389
              G    F D+ M++  +   + P  A      +    + G+  +          ++  
Sbjct: 357 TTPGTIAEFVDKLMDQLPKPLAKNPDGAPAALMFNSKKPLCGLSSLGFE-GFDALTSMEE 415

Query: 390 RLDMQDGDSCFFIAGDPLKF----CSFAADARNHIAQEL---GIINCNC-FEFCWIMDFP 441
             D++DGD   F A     F     +    AR H        G++  +   +F W+++FP
Sbjct: 416 FSDLEDGDVLVFQARKNAPFQGEGSTALGVARTHFYHSFVSAGLLPRSFDLKFLWVVNFP 475

Query: 442 FYEWNE-------EEKKIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIAS 493
            +  ++        +      H+PFT P    +  L   D L  +A  YDLV NG E+  
Sbjct: 476 MFTPDDGIDPGQGGQAGFKATHHPFTAPLTEDDVELLATDPLKARADHYDLVVNGVELGG 535

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  R H+S +      N+    +    +F  L  A + G PPH G A G DR+V +L   
Sbjct: 536 GSRRIHLSSMQEYVMRNILKMTDAGLAQFSHLLEALRAGCPPHAGFALGFDRLVAVLTHT 595

Query: 554 KNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            +VR+V  FP S    DL + SPS ++ +QL    L I + 
Sbjct: 596 DSVRDVIAFPKSMKGEDLTVKSPSRMTTQQLETYHLAIAKK 636


>gi|242786653|ref|XP_002480848.1| aspartyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218720995|gb|EED20414.1| aspartyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 665

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 167/493 (33%), Positives = 247/493 (50%), Gaps = 45/493 (9%)

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMR--CRMIAEN----FIECSTPILTASSPEGARDFLV 182
           R L LR D   +++ +  R  +  R  CR   EN    FIE  TP+L  S+PEGAR+F+V
Sbjct: 187 RHLQLRSD---RSLREALRFRSEARKVCREELENNSAPFIEIETPLLFKSTPEGAREFIV 243

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMS
Sbjct: 244 PTR-RKGLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMS 301

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +D++  +E V+R ++      +  +  F R+ Y +A+ R+G+DKPD R  + M  +
Sbjct: 302 FATGEDVMGAIEKVIRRLWSSLLGIDLGTEPFTRMPYQEAMSRFGSDKPDAR--LGMEII 359

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA------FCDRM--NEWARS-QGQ 353
              +V     V       NP  E + + ++    ++       F D     E+ ++  G 
Sbjct: 360 RLDYVLPVDLVQKISPLTNPIVEAFKLESEDNDPSKTLELITRFLDSPAGAEFNKNPDGG 419

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
           PG+ +++   D    + G+ P          E +   L+   GD     A     F   +
Sbjct: 420 PGI-FVY---DAKRPLRGLMP----FGFEAAERVEELLEPDHGDLIVLQARKNAPFSGGS 471

Query: 414 ---ADARNHIAQE---LGIINC-NCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPF 459
               D R  +  E    GI      F F W++DFP +   +E +        +   H+PF
Sbjct: 472 TPLGDLRKALHSEAVKAGIKEAPTGFSFLWVVDFPLFSPIDENEPGQGGTAGLASTHHPF 531

Query: 460 TMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           T P+   +  L   D  ++ A  YDLV NG E+  G  R H + V    F ++    E  
Sbjct: 532 TAPKSAADVDLMVTDPAAVVADHYDLVVNGVELGGGSRRIHDARVQEIVFRDILKMPESR 591

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
              F  L  A + G PPH GIA G DR++ ++LG ++VR+V  FP S    D+++GSPS 
Sbjct: 592 LTEFSHLLEALKAGCPPHAGIALGFDRLIAVMLGKESVRDVIAFPKSGKGEDVMVGSPSE 651

Query: 579 VSVEQLRELGLRI 591
           +S E L    LR+
Sbjct: 652 LSEEALDTYHLRL 664


>gi|296811002|ref|XP_002845839.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238843227|gb|EEQ32889.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 687

 Score =  231 bits (590), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 190/614 (30%), Positives = 300/614 (48%), Gaps = 65/614 (10%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRD---HYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           G  V L G++ + +  G  + F+ + D      +  VV+N  S   +  KS+     + I
Sbjct: 93  GKTVILHGYIGKRKKIGKNMTFVRLSDPTLSQSVQIVVSN--SQVLDALKSIEPNSAVAI 150

Query: 74  DGLVMSRSAETINANIIT----GQIELSAQKIEILSVAEELP--LPVFGEREYPESIRFK 127
            G+V S+  +  ++ +        +E+  Q I+ L+   E P  + V  +  +P S    
Sbjct: 151 HGIVKSKENQPQSSEVDDKDGLNTVEVELQDIQCLN---EFPKDIIVTSDTVFPPS---- 203

Query: 128 YRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFLVP 183
            R L +R D +L +++  R +   ++R R + E    F+E  TPIL  S+PEGAR+FLVP
Sbjct: 204 KRHLQIRNDASLRQSLAFRAKANVALR-RALEEFEPPFLEVETPILFKSTPEGAREFLVP 262

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R N+G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLDMEMSF
Sbjct: 263 TR-NRGLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEMSF 320

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
              +D++ T E +++ ++            F R+ Y  A+  YG+DKPD R  + +  V 
Sbjct: 321 ATAEDVMTTTEALVKKLWASVMPEPLAPEPFPRMSYHMAMSLYGSDKPDTRFDMRLRRV- 379

Query: 304 EHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWAR-SQGQ-----PGL 356
           + ++  +F   SKI S+N P  + + +  KG G  +     +N +   S+G+     P  
Sbjct: 380 DQYLPGDF--ISKITSLNSPSIDAFKV--KGNGCPKETMRVLNSFMNTSEGKYFLDNPDG 435

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A   + +D S  ++G+ P            +    +++ GD  FF       F   +  A
Sbjct: 436 APGVFAIDSSKPMSGLSPAG----FEAAWELERLFELEHGDLLFFQPRKDEPFSGGSTRA 491

Query: 417 --------RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTM 461
                   R  + +E        F F WI  FP +  + + +        I   H+PFT 
Sbjct: 492 GELRLAMHRFMVEKEFHSPPVG-FNFHWITGFPLFSPSVDSEPGQGGTAGIASTHHPFTA 550

Query: 462 PQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH---MSEVMLQAFSNVGISKEV 517
           P+   + +L   D +   A  YDLV NG E+  G  R H   + E++L+    V  S+  
Sbjct: 551 PRTAEDAALLLTDPIKAIADHYDLVVNGVELGGGSRRIHSAAVQELILRDILKVPPSR-- 608

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
               F  L    + G PPH GIA G DR++ ++ G ++VR V  FP      D ++ +PS
Sbjct: 609 -LQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTQSVRNVIAFPKGNRGEDPIVNTPS 667

Query: 578 TVSVEQLRELGLRI 591
            ++ E LR   L++
Sbjct: 668 PMTEESLRTYHLQL 681


>gi|115397899|ref|XP_001214541.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114192732|gb|EAU34432.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 561

 Score =  231 bits (590), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 178/584 (30%), Positives = 274/584 (46%), Gaps = 70/584 (11%)

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
           Q+V+   +   E  K +R+   + + G V ++ A+       T   E+    +  L+   
Sbjct: 6   QLVSTAKNGSLEKLKPIRANSPVAVRGRVQAKQAKGSEMEK-TDPWEIQVDDVHALN--- 61

Query: 109 ELPLPVFGEREYPESIRFK--------YRFLDLRRDT-LHKNIVKRTRIINSMR-----C 154
                     ++P+ I  K        +R+L LR D+ L + +  R ++ N  +     C
Sbjct: 62  ----------DFPKDILMKSDTVFAPKHRYLQLRVDSELREALRFRAQVHNICKEELEQC 111

Query: 155 RMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           R     F+E  TP+L  S+PEGAR+FLVP+R  +G  YALPQ+PQQYKQ+LMASG  RY+
Sbjct: 112 R---PAFVEIETPLLFKSTPEGAREFLVPTR-KKGLAYALPQSPQQYKQILMASGIPRYY 167

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           Q A CFRDED R+DR P EF QLD+EMSF   DD++ T+E ++R ++         S  F
Sbjct: 168 QFARCFRDEDLRADRQP-EFTQLDLEMSFATGDDVMRTVEGIIRRLWSSLMKDTAPSGPF 226

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
            R+ Y D++ RYG+DKPD R  + +  +         +  S +    P  EV+ +     
Sbjct: 227 RRMAYQDSMSRYGSDKPDTRFGMEISRIDYLLPVDLVQKISPL--TTPIVEVFKL-ENND 283

Query: 335 GGNRAFCDRMNEWARS----------QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
               A  D + ++  S          +G PG+ +++   D    + G+ P    L     
Sbjct: 284 NDPAAMSDFITQFLDSPAGAPFNENPEGGPGI-FVY---DAKKPLCGLTP----LGFEAA 335

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD------ARNHIAQELGIINCNC-FEFCWI 437
           E +   LD+  GD     A     F   +        A +  A   G       F+F WI
Sbjct: 336 EHLEELLDLDHGDLIVLQARKQGPFAGGSTPIGDLRRALHSAAVSSGFKPAPTGFDFLWI 395

Query: 438 MDFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGF 489
           +DFP +  + + +        I   H+PFT P+   +  L  +D   + A  YDLV NG 
Sbjct: 396 VDFPLFSPSSDAEPGQGGAAGISSTHHPFTAPKTAADVDLLLSDPTRVVADHYDLVVNGV 455

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G  R H + V      +V          F  L  A + G PPH G+A G DR+V L
Sbjct: 456 ELGGGSRRIHDAAVQELIMRDVLKMPAERLADFSHLLDALRAGCPPHAGLALGFDRLVAL 515

Query: 550 LLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +LG ++VR+V  FP + +   D ++ +PS V+ E L    L++ 
Sbjct: 516 MLGKESVRDVIAFPKIGKGGEDQMVKAPSPVTKEALETYHLQLT 559


>gi|296421241|ref|XP_002840174.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636387|emb|CAZ84365.1| unnamed protein product [Tuber melanosporum]
          Length = 593

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 160/487 (32%), Positives = 235/487 (48%), Gaps = 41/487 (8%)

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVPSRV 186
           R L LR  T    I  R R   +  CR   E  +F+E  TP+L  S+PEGAR+FLVP+R 
Sbjct: 121 RHLQLR-TTKELCIALRLRSRTASECRKFLEENDFLEVETPLLFKSTPEGAREFLVPTRK 179

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
             G+ YALPQ+PQQYKQ+LMASG  RY+Q+A CFRDED R+DR P EF QLD+EMSF   
Sbjct: 180 GDGTCYALPQSPQQYKQILMASGVPRYYQLAKCFRDEDLRADRQP-EFTQLDLEMSFATS 238

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP----IIMHNV 302
           DD+++ +E ++  +++   +   V   F R+ Y  A++ YGTDKPD R P      +H V
Sbjct: 239 DDVMDLVEGLVIRIWKNVLD-VCVGPGFKRVPYWWAMKNYGTDKPDFRYPNHRIKNLHEV 297

Query: 303 TEHFVHSE-----FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
             +    +     F  +    + N  + +  +            D    +    G    A
Sbjct: 298 LPYLAKGDRFVEGFAFYGNTPNYNMDHAIEFLEKFKRENLSTRDDNYVAYIAGAGNETQA 357

Query: 358 YI-----FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
           YI      WR  +  N+ G   V +   IV  +  R            + +G   K    
Sbjct: 358 YIEGGMELWRDADLANIHGALWVHRPGAIVVIKERRG-----------YYSGGNTKLGLL 406

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE-------KKIDFAHNPFTMPQGG 465
            +   N   ++  I + + + F W++DFP +     +             H+PFT P   
Sbjct: 407 RSALLNKAIEQKFISSRSDYAFVWVIDFPLFSPTSADDPGQSGRAPFSSTHHPFTAPIAE 466

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN--RFG 523
              L G+    ++A  YDLV NG E+  G  R H  E  LQ +    + K   E   +F 
Sbjct: 467 DIQLLGSSPHRVRAEHYDLVVNGTELGGGSRRIH--EAALQKYILEKVLKMPREKLQQFD 524

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            L      G PPH GIA G DR++ +++G  ++R+V  FP +    D+++GSPS V  ++
Sbjct: 525 HLLEVLDSGCPPHAGIALGFDRLIAVMMGRDSIRDVIAFPKNSKGADVMVGSPSVVPDKE 584

Query: 584 LRELGLR 590
           L+  GLR
Sbjct: 585 LQAYGLR 591


>gi|291336621|gb|ADD96167.1| hypothetical protein [uncultured organism MedDCM-OCT-S05-C185]
          Length = 205

 Score =  231 bits (588), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 112/204 (54%), Positives = 139/204 (68%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+C +L   +VG   RLSGW+HR R HG ++FLD+RDHYGITQ V + +   F 
Sbjct: 1   MHRYRTHNCNELRPENVGETARLSGWIHRRRDHGQLVFLDLRDHYGITQCVVDIEDKSFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR E V+ I G V+ R  ETIN  I TG IEL     EI S A+ +PL V  E + 
Sbjct: 61  DVEKVRVESVVTITGQVLRRDEETINPKIPTGHIELRIDTFEIQSSADLVPLQVNSEEDA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YRFLDLRR+ +H NI+ R+ +I+S+R RMI   F+E  TPILTASSPEGARDF
Sbjct: 121 GEELRLRYRFLDLRRERIHNNIITRSNVISSIRRRMIDRGFVEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQL 204
           LVPSR++ G FYALPQAP     L
Sbjct: 181 LVPSRLHPGKFYALPQAPNNLNSL 204


>gi|326473216|gb|EGD97225.1| aspartyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 685

 Score =  230 bits (587), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 193/615 (31%), Positives = 299/615 (48%), Gaps = 67/615 (10%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRD---HYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           G  V + G++ + +  G  + F+ + D      +  VV+NP S      KS+     + I
Sbjct: 91  GRPVTIHGYIGKRKKIGKNMTFVRLSDPTLSRSVQIVVSNPHS--LNTLKSIEPNSPVAI 148

Query: 74  DGLVMSRSA-----ETINANIITGQIELSAQKIEILSVAEELP--LPVFGEREYPESIRF 126
            G+V S+ +     E+ + + + G +E+  Q ++ L+   E P  + +  +  +P S   
Sbjct: 149 SGIVKSKESQPQFRESADESGLDG-VEIELQDVQCLN---EFPKDIIITPDTVFPPS--- 201

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFLV 182
             R L +R D +L +++  R +   ++R R + E    F+E  TPIL  S+PEGAR+FLV
Sbjct: 202 -KRHLQIRNDPSLRQSLAFRAKANAALR-RALEECEPPFLEVETPILFKSTPEGAREFLV 259

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R NQG  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLDMEMS
Sbjct: 260 PTR-NQGLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEMS 317

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +D++ T E +++ ++            F R+ Y +A+  YG+DKPD R  + +H V
Sbjct: 318 FATAEDVITTTETLVKKLWASVMPEPLGPEPFPRMSYYEAMGSYGSDKPDTRFDMKLHRV 377

Query: 303 TEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGN----RAFCDRMNE------WARSQ 351
            E ++ ++F    KI S+N P  E + +  KG G      R     MN            
Sbjct: 378 -EQYLPADF--IGKISSLNSPVVEAFIV--KGNGNPEESMRVLRSFMNTPEAKPFLDNPD 432

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-- 409
           G PG     + +D S  + G+   A      + E +   L  + GD  FF       F  
Sbjct: 433 GAPGT----FVIDSSKPMGGLS-AAGFEGAWDLETL---LKSEHGDLIFFQCRQDEPFSG 484

Query: 410 -CSFAADARNHIAQ---ELGIINCNC-FEFCWIMDFPFYEWNEEEKK-------IDFAHN 457
             + A + R  + Q   E G ++    F F W+  FP +  + E +        I   H+
Sbjct: 485 GSTKAGELRLAVHQYMVEKGFLSPPVGFNFHWVTGFPLFSPSVETEPGQGGTAGIASTHH 544

Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           PFT P+   + +L   D     A  YDLV NG E+  G  R H + V      ++     
Sbjct: 545 PFTAPRTAKDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSAAVQEFVLRDILKVPP 604

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
                F  L    + G PPH GIA G DR++ ++ G ++VR V  FP      D ++ +P
Sbjct: 605 SRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTQSVRNVIAFPKGNKGEDPMVKTP 664

Query: 577 STVSVEQLRELGLRI 591
           S ++ + L+   L++
Sbjct: 665 SPMTEDSLQTYHLQL 679


>gi|326477678|gb|EGE01688.1| aspartyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 685

 Score =  230 bits (586), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 193/615 (31%), Positives = 299/615 (48%), Gaps = 67/615 (10%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRD---HYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           G  V + G++ + +  G  + F+ + D      +  VV+NP S      KS+     + I
Sbjct: 91  GRPVTIHGYIGKRKKIGKNMTFVRLSDPTLSRSVQIVVSNPHS--LNTLKSIEPNSPVAI 148

Query: 74  DGLVMSRSA-----ETINANIITGQIELSAQKIEILSVAEELP--LPVFGEREYPESIRF 126
            G+V S+ +     E+ + + + G +E+  Q ++ L+   E P  + +  +  +P S   
Sbjct: 149 SGIVKSKESQPQFRESADESGLDG-VEIELQDVQCLN---EFPKDIIITPDTVFPPS--- 201

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFLV 182
             R L +R D +L +++  R +   ++R R + E    F+E  TPIL  S+PEGAR+FLV
Sbjct: 202 -KRHLQIRNDPSLRQSLAFRAKANAALR-RALEECEPPFLEVETPILFKSTPEGAREFLV 259

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R NQG  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLDMEMS
Sbjct: 260 PTR-NQGLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEMS 317

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +D++ T E +++ ++            F R+ Y +A+  YG+DKPD R  + +H V
Sbjct: 318 FATAEDVITTTETLVKKLWASVMPEPLGPEPFPRMSYYEAMGSYGSDKPDTRFDMKLHRV 377

Query: 303 TEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGG----GNRAFCDRMNE------WARSQ 351
            E ++ ++F    KI S+N P  E + +  KG G      R     MN            
Sbjct: 378 -EQYLPADF--IGKISSLNSPVVEAFIV--KGNGHPEESMRVLRSFMNTPEAKPFLDNPD 432

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-- 409
           G PG     + +D S  + G+   A      + E +   L  + GD  FF       F  
Sbjct: 433 GAPGT----FVIDSSKPMGGLS-AAGFEGAWDLETL---LKSEHGDLIFFQCRQDEPFSG 484

Query: 410 -CSFAADARNHIAQ---ELGIINCNC-FEFCWIMDFPFYEWNEEEKK-------IDFAHN 457
             + A + R  + Q   E G ++    F F W+  FP +  + E +        I   H+
Sbjct: 485 GSTKAGELRLAVHQYMVEKGFLSPPVGFNFHWVTGFPLFSPSVETEPGQGGTAGIASTHH 544

Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           PFT P+   + +L   D     A  YDLV NG E+  G  R H + V      ++     
Sbjct: 545 PFTAPRTAKDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSAAVQEFVLRDILKVPP 604

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
                F  L    + G PPH GIA G DR++ ++ G ++VR V  FP      D ++ +P
Sbjct: 605 SRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTQSVRNVIAFPKGNKGEDPMVKTP 664

Query: 577 STVSVEQLRELGLRI 591
           S ++ + L+   L++
Sbjct: 665 SPMTEDSLQTYHLQL 679


>gi|50310079|ref|XP_455053.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644188|emb|CAH00140.1| KLLA0E24465p [Kluyveromyces lactis]
          Length = 645

 Score =  229 bits (585), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 189/620 (30%), Positives = 284/620 (45%), Gaps = 75/620 (12%)

Query: 21  VRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V L+GW+       G  +IF  +RD  G  + +   DS  F + +S   + V  I  L  
Sbjct: 47  VVLNGWIDAKPKKVGKNLIFGTLRDPNG--EKIQLVDSQSF-LKESQVEDVVQIIGELSE 103

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
            +  +    NI   + EL   +++ L+ A + P  +   +    +   +YR+L LR    
Sbjct: 104 KKQTQQSTVNI---EYELKIIELQKLNQANKKPSQLQDLKADDGAFPPEYRYLQLRLPKY 160

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---QGSFYALP 195
             N+  R     ++R  + + NF E  TP+L  S+PEGAR+FLVP+R     + SFYALP
Sbjct: 161 QNNLKLRYEASKNVRTVLDSLNFTEVETPLLFKSTPEGAREFLVPTRGKIDGEASFYALP 220

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQQYKQLL+ASG +RYFQ+A CFRDED RSDR P EF Q+D+EM+F    D+   +E 
Sbjct: 221 QSPQQYKQLLIASGVNRYFQVARCFRDEDLRSDRQP-EFTQVDLEMAFSSGKDVREVVEK 279

Query: 256 VLRGVFEEFSNGNTV---------------SNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           V+   + +     T                +   + + Y   + +YG DKPDLR P +  
Sbjct: 280 VITSTWNKLHASGTDLHTLDRTGKIIPVSGTEKIINLTYQQVMTQYGIDKPDLRYPDL-- 337

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF---CDRMNEWARSQGQPGLA 357
              +    SEF+ +       P +EV  +        +AF    +   +W+    +    
Sbjct: 338 ---KLMDLSEFKAYGYTNKEFPVFEVIVL-------RKAFETVEEFHRDWSYLSNKDNYN 387

Query: 358 Y-----IFWRLDESGN--VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
           Y     +    DE G        P+A      N + I   L+++ GD       +P +  
Sbjct: 388 YRAPIVVPIESDELGTSWFTKFLPIAA---FENPKLITKFLNLRKGDIIIGSTREPSRRL 444

Query: 411 ----SFAADARNHIAQ-----ELGIINCNCFEFCWIMDFPFYEWNEE------------E 449
               +    AR  I Q     EL     +     W++DFP +   EE            E
Sbjct: 445 FENPTPLGRARQLITQSKRGKEL-FRKTDASVAAWVVDFPLFAPVEETAEKGSHYPVYTE 503

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                 H+PFTM      +   +D LS     YDLV NG E+  G  R H  E+    F 
Sbjct: 504 NAFSSTHHPFTMVNLRDYNKLESDPLSCHGEHYDLVVNGVELGGGSTRIHDPELQNYIFH 563

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            + ++ +  E+ FG L  AF+ G PPH G A G DR+  +L G++++R+V  FP S +  
Sbjct: 564 EI-LNIKNPEDLFGHLLNAFKMGTPPHAGFAIGFDRMCAMLCGSESIRDVIAFPKSISGV 622

Query: 570 DLLMGSPSTVSVEQLRELGL 589
           D ++GSPSTV    L E  +
Sbjct: 623 DKVVGSPSTVPASTLDEYNI 642


>gi|325087845|gb|EGC41155.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 637

 Score =  229 bits (585), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 173/500 (34%), Positives = 257/500 (51%), Gaps = 54/500 (10%)

Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDFLV 182
           R L +R D+ L   ++ R R  N +R     C++    F+E  TP+L  S+ EGAR+FLV
Sbjct: 156 RHLQIRTDSKLRDALLFRARARNILREALEECQL---PFVEIETPLLFKSTLEGAREFLV 212

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMS
Sbjct: 213 PTR-RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMS 270

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +D++  +E  ++ ++    +    S +F R+ Y DA+ +YG+DKPD+R  + +  +
Sbjct: 271 FATGEDVMAIIEAAVKRLWSSLMSEPLPSGSFPRLSYGDAMAKYGSDKPDVRIGMEIKRI 330

Query: 303 TEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARS----------Q 351
            E+ +  +  + SKI  + NP  E  AI  +G          +N +  S          +
Sbjct: 331 -ENMIPVD--LVSKISPLHNPIVE--AIKLEGNENPEEMRKFLNSFMDSPEASSFHKNPE 385

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G PG A+++   D    ++G+ P         T  +   LD++DGD     A     F  
Sbjct: 386 GGPG-AFVY---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARKNAPFSG 437

Query: 412 FAA---DARNHIAQ-ELG---IINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHN 457
            +    D R  I +  +G   I +   F F W+ DFP +    + +        I   H+
Sbjct: 438 GSTPLGDLRREIHKAAVGATLISSPTGFHFLWVRDFPLFSPITDSEPGQGGAAGIASTHH 497

Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           PFT P    + SL   D   + A  YDLV NG E+  G  R H + V  Q F    I K 
Sbjct: 498 PFTAPLRKSDVSLLLTDPTKVIADHYDLVVNGVELGGGSRRIHSAAV--QEFILRDILKM 555

Query: 517 VVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
             +    F  L  A + G PPH GIA G DR+V ++LG +++R+V  FP S    DLL+ 
Sbjct: 556 PADRLADFSHLLEALRAGCPPHAGIALGFDRLVAVMLGKESLRDVIAFPKSGKGEDLLVK 615

Query: 575 SPSTVSVEQLRELGLRIVEN 594
            PS ++ E LR   L+++++
Sbjct: 616 CPSEMTEESLRTYHLQLMDD 635


>gi|302502919|ref|XP_003013420.1| hypothetical protein ARB_00238 [Arthroderma benhamiae CBS 112371]
 gi|291176984|gb|EFE32780.1| hypothetical protein ARB_00238 [Arthroderma benhamiae CBS 112371]
          Length = 621

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 190/616 (30%), Positives = 289/616 (46%), Gaps = 69/616 (11%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRD---HYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           G  V + G++ + +  G  + F+ + D      +  VV+NP S   +  KS+     + +
Sbjct: 27  GRPVTIHGYIGKRKKIGKNMTFVRLSDPTLSQSVQIVVSNPHS--LDALKSIEPNSAVVV 84

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF------- 126
            G+V S+ +++        Q   S  K E+  V  EL   V    E+P  I         
Sbjct: 85  SGIVKSKESQS--------QFRESGDKSELDDVEVEL-QDVQCLNEFPRDIIITPDTVFP 135

Query: 127 -KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFL 181
              R L +R D +L +++  R +   ++R R + E    F+E  TPIL  S+PEGAR+FL
Sbjct: 136 PSKRHLQIRNDPSLRQSLAFRAKANAALR-RALEECEPPFLEIETPILFKSTPEGAREFL 194

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R NQG  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLDMEM
Sbjct: 195 VPTR-NQGLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEM 252

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF   +D++ T E +++ ++            F R+ Y +A+  YG+DKPD R  + +H 
Sbjct: 253 SFATAEDVITTTEALVKKLWASVMPEPLGPEPFPRMSYYEAMASYGSDKPDTRFDMKLHR 312

Query: 302 VTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGN----RAFCDRMNE------WARS 350
           V E ++ ++F    KI S+N P  E + +  KG G      R     MN           
Sbjct: 313 V-EQYLPADF--IGKISSLNSPVVEAFIV--KGNGHPEETMRVLRSFMNTPEAKPFLENP 367

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-------IA 403
            G PG     + +D S  + G+   A      + E +      + GD  FF       I+
Sbjct: 368 DGAPGT----FVIDSSKPMGGLS-AAGFEGAWDLETL---FKSEHGDLIFFQCRKDEPIS 419

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAH 456
           G   K          ++ ++  +     F F W+  FP +  + E +        I   H
Sbjct: 420 GGSTKAGELRLAVHQYMVEKGFLSPPVGFNFHWVTGFPLFSPSVETEPGQGGTAGIASTH 479

Query: 457 NPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           +PFT P+   + +L   D     A  YDLV NG E+  G  R H + V      ++    
Sbjct: 480 HPFTAPRTAEDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSAAVQEFVLRDILKVP 539

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
                 F  L    + G PPH GIA G DR++ ++ G  +VR V  FP      D ++ +
Sbjct: 540 PSRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTPSVRNVIAFPKGNKGEDPMVKT 599

Query: 576 PSTVSVEQLRELGLRI 591
           PS ++ + L+   L++
Sbjct: 600 PSPMTEDSLQTYHLQL 615


>gi|307069545|ref|YP_003878022.1| putative aspartyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
 gi|306482805|gb|ADM89676.1| putative aspartyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
          Length = 567

 Score =  228 bits (581), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 175/593 (29%), Positives = 292/593 (49%), Gaps = 46/593 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R   CG +    +     L GW++ +R HG IIF D+RD  GI Q++       F     
Sbjct: 4   RNKFCGIINKKFINKIKYLYGWINNIRKHGNIIFFDLRDRSGIIQIIIKKKIKYFYKIIK 63

Query: 65  VR-SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
              +E+ + I G++ +R  + IN  I TG+IE+    I+IL+  ++  +    +    ++
Sbjct: 64  KIKNEYCIEILGIIFNRINKNINYKIFTGEIEIYILNIKILNKCKKKIINFNKKNNNEKN 123

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
              K R   LR++ ++ N   + +IIN +R  +   NFIE  TPIL+  +  G+++FL  
Sbjct: 124 KL-KNRIFYLRKNKIYNNFYIKNKIINIIRNFLNKNNFIEVETPILSKITLGGSKEFLTF 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           S+ N+  F+AL Q+PQ +KQLLM S FDRY+QIA CFR+E+ R DR P EF Q+D EMSF
Sbjct: 183 SKNNKNKFFALAQSPQIFKQLLMISNFDRYYQIAKCFRNENLRKDRQP-EFTQIDCEMSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I+   E +++ +F++  N N +   F  + +  +I+ YGTDKPDLR         
Sbjct: 242 MNKKEIIFFFEKLIKKIFKKILNINFIK-PFKILKFKKSIKYYGTDKPDLR--------- 291

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG-------- 355
              ++ +   F  I  +N  Y       K   G+R     +N +     +          
Sbjct: 292 ---INLKLLCFKNIFFINNKYIKKIFFIKILNGSRMKIKDINYYINYINKFNIYFLIIIK 348

Query: 356 ------LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK- 408
                     F ++++  N      + K  N+   + I + +  +      FI    LK 
Sbjct: 349 IKKYFIFKKYFLKINKYINEEFFFKLLKKNNVKINDIILIFITNKKKIYK-FINKLILKI 407

Query: 409 -FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
            + +F+   +  I + + +         WI++FP ++ N     I   H+ FT P     
Sbjct: 408 GYSNFSKKNKIFINKIIPL---------WIINFPLFKKNNNN--IKSYHHIFTSPLKKKF 456

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           + K    +  K+  YDLV NG EI  G IR +  ++  + F  + I+K+ ++++F     
Sbjct: 457 NKKNIFKIFSKS--YDLVINGVEIGGGSIRIYKHKLQNKIFKILNINKKSIKSKFNFFLN 514

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
           + +   PPHGGIA GIDR++ ++L  K++REV  FP +Q F  LL   P+ + 
Sbjct: 515 SLKLSTPPHGGIAFGIDRLLYIILNLKSIREVIAFPKTQKFKCLLTKCPNYIK 567


>gi|302657987|ref|XP_003020704.1| hypothetical protein TRV_05230 [Trichophyton verrucosum HKI 0517]
 gi|291184561|gb|EFE40086.1| hypothetical protein TRV_05230 [Trichophyton verrucosum HKI 0517]
          Length = 621

 Score =  228 bits (580), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 189/615 (30%), Positives = 295/615 (47%), Gaps = 67/615 (10%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRD---HYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           G  V + G++ + +  G  + F+ + D      +  VV++P S      KS+     + I
Sbjct: 27  GRPVTIHGYIGKRKKIGKNMTFVRLSDPTLSRSVQIVVSSPHS--LNALKSIEPNSAVVI 84

Query: 74  DGLVMSRSA-----ETINANIITGQIELSAQKIEILSVAEELP--LPVFGEREYPESIRF 126
            G+V S+ +     E+ + + + G +E+  Q ++ L+   E P  + +  +  +P S   
Sbjct: 85  SGIVKSKESQSQFRESGDKSELDG-VEIELQDVQCLN---EFPRDIIITPDTVFPPS--- 137

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFLV 182
             R L +R D +L +++  R +   ++R R + E    F+E  TPIL  S+PEGAR+FLV
Sbjct: 138 -KRHLQIRNDPSLRQSLAFRAKANAALR-RALEECEPPFLEVETPILFKSTPEGAREFLV 195

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R NQG  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLDMEMS
Sbjct: 196 PTR-NQGLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEMS 253

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +D++ T E +++ ++            F R+ Y +A+  YG+DKPD R  + +H V
Sbjct: 254 FATAEDVITTTEALVKKLWASVMPEPLGPEPFPRMSYYEAMASYGSDKPDTRFDMKLHRV 313

Query: 303 TEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGN----RAFCDRMNE------WARSQ 351
            E ++ ++F    KI S+N P  E + +  KG G      R     MN            
Sbjct: 314 -EQYLPADF--IGKISSLNSPVVEAFIV--KGNGHPEETMRVLRSFMNTPEAKPFLENPD 368

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-------IAG 404
           G PG   I    D S  + G+   A      + E +     ++ GD  FF       I+G
Sbjct: 369 GAPGTFVI----DSSKPMGGLS-AAGFEGAWDLETL---FKLEHGDLVFFQCRKDEPISG 420

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHN 457
              K          ++ ++  +     F F W+  FP +  + E +        I   H+
Sbjct: 421 GSTKAGELRLAVHQYMVEKGFLSPPVGFNFHWVTGFPLFSPSVETEPGQGGTAGIASTHH 480

Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           PFT P+   + +L   D     A  YDLV NG E+  G  R H + V      ++     
Sbjct: 481 PFTAPRTAEDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSAAVQEFVLRDILKVPP 540

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
                F  L    + G PPH GIA G DR++ ++ G  +VR V  FP      D ++ +P
Sbjct: 541 SRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTPSVRNVIAFPKGNKGEDPMVKTP 600

Query: 577 STVSVEQLRELGLRI 591
           S ++ + L+   L++
Sbjct: 601 SPMTEDSLQTYHLQL 615


>gi|83769100|dbj|BAE59237.1| unnamed protein product [Aspergillus oryzae]
          Length = 677

 Score =  227 bits (579), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 186/587 (31%), Positives = 286/587 (48%), Gaps = 74/587 (12%)

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
           Q+V+   +   E  K+VR+   + + G V ++ A+       T   E+    I  L+   
Sbjct: 123 QLVSLAKNGALEKLKAVRANSPVAVRGKVKAKQAKGSEMEK-TDPWEIQVDDIRTLN--- 178

Query: 109 ELPLPVFGERE--YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAEN 160
           + P  +  + +  +P     K RFL LR D+  ++ ++ R ++ N  +     CR     
Sbjct: 179 DFPSDIIMKSDTVFPP----KQRFLQLRSDSELRDALRFRAQVHNVCKEELEQCR---PP 231

Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
           F+E  TP+L  S+PEGAR+FLVP+R  +G  YALPQ+PQQYKQ+LMASG  RYFQ A CF
Sbjct: 232 FVEIETPLLFKSTPEGAREFLVPTR-KRGLAYALPQSPQQYKQILMASGIPRYFQFARCF 290

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
           RDED R+DR P EF QLDMEMSF   +D++ T+E ++R ++         S  F R+ Y 
Sbjct: 291 RDEDLRADRQP-EFTQLDMEMSFATGEDVMRTVEGIIRRLWSTLMKDPAPSGPFQRMSYQ 349

Query: 281 DAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN-PGYEVWAI------PAKG 333
           DA+ RYG+DKPD R  + +  + EH +  +  + SKI  +  P  EV+ +      PA  
Sbjct: 350 DAMSRYGSDKPDTRFGMEISRI-EHLLPVD--LVSKITPLTLPIVEVFKLENNENDPAAM 406

Query: 334 GGGNRAFCDRMNEWA---RSQGQPGLAYIFWRLDESGNVAGMGPVA-------------K 377
                 F D           +G PG+ +++   D    + G+ P                
Sbjct: 407 SEFISQFLDSPAGVPFNNNPEGGPGI-FVY---DAKKPLCGLQPFGFEAAEYLEELLELD 462

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
           H +++  +A R +     G +     GD  +    AA +        G      F+F WI
Sbjct: 463 HGDLIVIQA-REKAPFSGGSTPI---GDLRRALHSAAVSSGFKPAPTG------FDFRWI 512

Query: 438 MDFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGF 489
           +DFP +  + + +        I   H+PFT P+   +  L   D   + A  YDLV NG 
Sbjct: 513 VDFPLFSPSSDSEPGQGGAAGISSTHHPFTAPKTAADVDLLLTDPTKVVADHYDLVVNGV 572

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           E+  G  R H  +  +Q F    I +   E    F  L  A + G PPH G+A G DR+V
Sbjct: 573 ELGGGSRRIH--DATVQEFILRDILQMPAERLADFSHLLEALRAGCPPHAGLALGFDRLV 630

Query: 548 MLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            ++LG ++VR+V  FP + +   D ++ +PS ++ E L    L++ E
Sbjct: 631 AVMLGKESVRDVIAFPKIGKVGEDPMVKAPSVMTEEALETYHLQLKE 677


>gi|224540812|ref|ZP_03681351.1| hypothetical protein BACCELL_05726 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224517571|gb|EEF86676.1| hypothetical protein BACCELL_05726 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 227

 Score =  227 bits (579), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 115/228 (50%), Positives = 155/228 (67%), Gaps = 4/228 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           +R+H+CG+L +SDV   V L+GWV R R  GG+ F+D+RD YGITQ+V N   D+A  E 
Sbjct: 2   FRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVDAALCEN 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+ I G V  R ++  NANI TG IE+   ++ +L+ A   P  +    +  
Sbjct: 62  ANRLGREFVIQITGTVNERFSK--NANIPTGDIEIIVSELNVLNAALTPPFTIEDNTDGG 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR ++ +N+  R R+   +R  + ++ FIE  TP+L  S+PEGARDF+
Sbjct: 120 DDIRMKYRYLDLRRPSVRRNLELRHRMTIEVRRYLDSQGFIEVETPVLVGSTPEGARDFV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
           VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR
Sbjct: 180 VPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADR 227


>gi|317146025|ref|XP_001821239.2| aspartyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 588

 Score =  227 bits (578), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 186/587 (31%), Positives = 286/587 (48%), Gaps = 74/587 (12%)

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
           Q+V+   +   E  K+VR+   + + G V ++ A+       T   E+    I  L+   
Sbjct: 34  QLVSLAKNGALEKLKAVRANSPVAVRGKVKAKQAKGSEMEK-TDPWEIQVDDIRTLN--- 89

Query: 109 ELPLPVFGERE--YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAEN 160
           + P  +  + +  +P     K RFL LR D+  ++ ++ R ++ N  +     CR     
Sbjct: 90  DFPSDIIMKSDTVFPP----KQRFLQLRSDSELRDALRFRAQVHNVCKEELEQCR---PP 142

Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
           F+E  TP+L  S+PEGAR+FLVP+R  +G  YALPQ+PQQYKQ+LMASG  RYFQ A CF
Sbjct: 143 FVEIETPLLFKSTPEGAREFLVPTR-KRGLAYALPQSPQQYKQILMASGIPRYFQFARCF 201

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
           RDED R+DR P EF QLDMEMSF   +D++ T+E ++R ++         S  F R+ Y 
Sbjct: 202 RDEDLRADRQP-EFTQLDMEMSFATGEDVMRTVEGIIRRLWSTLMKDPAPSGPFQRMSYQ 260

Query: 281 DAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN-PGYEVWAI------PAKG 333
           DA+ RYG+DKPD R  + +  + EH +  +  + SKI  +  P  EV+ +      PA  
Sbjct: 261 DAMSRYGSDKPDTRFGMEISRI-EHLLPVD--LVSKITPLTLPIVEVFKLENNENDPAAM 317

Query: 334 GGGNRAFCDRMNEWA---RSQGQPGLAYIFWRLDESGNVAGMGPVA-------------K 377
                 F D           +G PG+ +++   D    + G+ P                
Sbjct: 318 SEFISQFLDSPAGVPFNNNPEGGPGI-FVY---DAKKPLCGLQPFGFEAAEYLEELLELD 373

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
           H +++  +A R +     G +     GD  +    AA +        G      F+F WI
Sbjct: 374 HGDLIVIQA-REKAPFSGGSTPI---GDLRRALHSAAVSSGFKPAPTG------FDFRWI 423

Query: 438 MDFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGF 489
           +DFP +  + + +        I   H+PFT P+   +  L   D   + A  YDLV NG 
Sbjct: 424 VDFPLFSPSSDSEPGQGGAAGISSTHHPFTAPKTAADVDLLLTDPTKVVADHYDLVVNGV 483

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           E+  G  R H  +  +Q F    I +   E    F  L  A + G PPH G+A G DR+V
Sbjct: 484 ELGGGSRRIH--DATVQEFILRDILQMPAERLADFSHLLEALRAGCPPHAGLALGFDRLV 541

Query: 548 MLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            ++LG ++VR+V  FP + +   D ++ +PS ++ E L    L++ E
Sbjct: 542 AVMLGKESVRDVIAFPKIGKVGEDPMVKAPSVMTEEALETYHLQLKE 588


>gi|254572794|ref|XP_002493506.1| Mitochondrial aspartyl-tRNA synthetase, required for acylation of
           aspartyl-tRNA [Pichia pastoris GS115]
 gi|238033305|emb|CAY71327.1| Mitochondrial aspartyl-tRNA synthetase, required for acylation of
           aspartyl-tRNA [Pichia pastoris GS115]
 gi|328354669|emb|CCA41066.1| aspartyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 665

 Score =  227 bits (578), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 184/645 (28%), Positives = 298/645 (46%), Gaps = 83/645 (12%)

Query: 6   THSCGDLGVS---DVGSFVRLSGWVHRVRPHG---GIIFLDIRDHYG-ITQVVANPDSAC 58
           TH+ G + +S    +G  + L GW++  +P      + F ++RD+ G ITQ+V   +   
Sbjct: 43  THTIGSVALSLEKYLGKEITLHGWMNS-KPRKVSKRLAFGELRDYNGDITQIVIADEEM- 100

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEELPLPV--- 114
             I+  ++ E  + + G +  R  +   +    G++ +L+  K++IL+ +  +P  +   
Sbjct: 101 --ISLQLQLEDAIAVTGTISRRRPKKDQSEESVGKLWDLNVIKLQILNRSNLVPSQLKSL 158

Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                +YP     +YR+L LR       +  R + +  +R  + + +F E  TP+L  S+
Sbjct: 159 DVASPDYPP----EYRYLQLRSKFFQDALKLRAKALQRVRSTLDSLSFTEIETPLLFKST 214

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           PEGA +FLVP+R  +  FYALPQ+PQQYKQLLMASG   Y+Q+A CFRDED R+DR P E
Sbjct: 215 PEGANEFLVPTR-RKSYFYALPQSPQQYKQLLMASGVKSYYQVARCFRDEDLRADRQP-E 272

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE---------FSNGNTV-SNNFLRICYDDAI 283
           F Q+D+EMSF +   + + +E V+  V+ +         F     V SN F  + Y   +
Sbjct: 273 FTQIDIEMSFADGKQVRHAVEQVVNNVWLDVKKSPLYVPFGTDQLVRSNEFPLMSYKSVL 332

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
             YG DKPDLR+ +  H+++E         F       P +EV  +     G +    D 
Sbjct: 333 ELYGIDKPDLRSSLRFHDISEFTTRVANPDF-------PVFEVCVLKQAFEGSHYTIPDL 385

Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD------ 397
           + +    + +    +      +  N          ++    E +  +L++Q GD      
Sbjct: 386 LIQPDNYKSRRPAMFAIKSTTDLNNWHQHFSEYADIDSSKLEELTAKLNLQPGDIITGAD 445

Query: 398 ---------------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPF 442
                              I   P K+    A++     ++L +         W++DFP 
Sbjct: 446 RAILPYENPTPLGRFRQLAIEQFPTKWRRTVANSEEDTLKDLSVA-------TWVVDFPL 498

Query: 443 YEWNEEEK-------------KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
           +   EE++             + +  H+PFTM       L   D L++    YDLV NG 
Sbjct: 499 FNPVEEDQLSGKQSYPLYKKNQYESTHHPFTMCSPADYDLLSTDPLAVHGEHYDLVVNGV 558

Query: 490 EIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           E+  G  R H S +    F  + GI        FG L  AF+ G PPH G A G DR+  
Sbjct: 559 EVGGGSRRIHDSNLQQYIFKEILGIQDP--HRLFGHLLGAFESGCPPHAGFAIGFDRLCA 616

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +LLG+ ++R+V  FP +Q   D +  SPS V  + L +  +R +E
Sbjct: 617 MLLGSTSIRDVIAFPKNQKGRDPVTESPSMVPSKTLEKYHIREIE 661


>gi|145616054|ref|XP_001415131.1| hypothetical protein MGG_13512 [Magnaporthe oryzae 70-15]
 gi|145009821|gb|EDJ94477.1| hypothetical protein MGG_13512 [Magnaporthe oryzae 70-15]
          Length = 660

 Score =  227 bits (578), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 176/525 (33%), Positives = 240/525 (45%), Gaps = 79/525 (15%)

Query: 129 RFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R L LR  DTL + +  R  + +S+   +  ENF E  TPIL  S+PEGAR+FLVP+R  
Sbjct: 145 RHLQLRFSDTLRERMRFRQHVKSSVTACLEKENFSEVETPILFKSTPEGAREFLVPTR-R 203

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
            G  YALPQ+PQQYKQ LMA+GF  YFQ A CFRDED R+DR P EF QLDMEMSF   +
Sbjct: 204 PGLAYALPQSPQQYKQTLMAAGFGGYFQFARCFRDEDLRADRQP-EFTQLDMEMSFATGE 262

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFL-------------------------------- 275
           D++ T+E +++ ++      N V+ NF+                                
Sbjct: 263 DVMRTVEMLIKQLY------NNVATNFVQVVDTDGWHPVSRKRQCGKRGSSEESVRDFPS 316

Query: 276 -------RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV-NPGYEVW 327
                  R+ Y D +  YG+DKPDLR P  +  V EH + ++F   S I  + NP  + W
Sbjct: 317 IDDGPLPRMSYQDVMSLYGSDKPDLRIPGQIERV-EHVLPAQF--VSMISEIDNPIIDCW 373

Query: 328 AIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT--- 384
                GG        R  +   S+    L     R  +   V  +   +K LN  ++   
Sbjct: 374 RCTLDGG------SPRKYQKFFSKILSNLPLGLNRNPDGEPVILVHDSSKPLNGFSSLGF 427

Query: 385 -EAIRVRLDMQDGDSCFFIA-------GDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
             A ++  DMQDGD     A       G      +  +   N       I     F+F W
Sbjct: 428 EAAEKLTSDMQDGDVLILQARKNRPFEGGSTALGTLRSLIYNEAVAAEYIPADPSFKFLW 487

Query: 437 IMDFPFYEWNEE---------EKKIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVC 486
           +  FP +    E                H+PFT P    +  L   D L  KA  YDLV 
Sbjct: 488 VTGFPLFTPANEGTTDPGQGGSAGFSSTHHPFTAPLTSQDFELLATDPLRAKADHYDLVL 547

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           NG E+  G  R H++ V    F ++    +    +F  L  A + G PPH G A G DR+
Sbjct: 548 NGCELGGGSRRIHVAHVQEFVFRSILRMTDTGVAQFRHLLEALRAGCPPHAGFALGFDRL 607

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           V +L G  +VR+V  FP S    +   GSPS ++ EQL    LR+
Sbjct: 608 VAMLSGTGSVRDVIAFPKSMKGEEPFAGSPSFMTEEQLETYHLRL 652


>gi|212543427|ref|XP_002151868.1| aspartyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
 gi|210066775|gb|EEA20868.1| aspartyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
          Length = 688

 Score =  227 bits (578), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 178/581 (30%), Positives = 280/581 (48%), Gaps = 61/581 (10%)

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
           Q++++  +   +  KS+ S   + I G        T+ A   +G+ E  A  +E +   E
Sbjct: 129 QIISSAKNEVHQQLKSLPSNSPVAIQG--------TVQAKKGSGEGEREAPDVEKIDSLE 180

Query: 109 ELPLPVFGEREYPESIRF--------KYRFLDLRRDTLHKNIVKRTRIINSMR--CRMIA 158
                ++   E+ + I          + R L LR D   + + +  R  +  R  CR   
Sbjct: 181 ISLTNIWLLNEFSKDIIMTSETVFPAEQRHLQLRSD---RGLREALRFRSEARKVCREEL 237

Query: 159 EN----FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           EN    FIE  TP+L  S+PEGAR+F+VP+R  +G  YALPQ+PQQYKQ+LMASG  RY+
Sbjct: 238 ENMSPPFIEIETPLLFKSTPEGAREFIVPTR-RKGLAYALPQSPQQYKQILMASGIPRYY 296

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           Q A CFRDED R+DR P EF QLD+EMSF   +D++ ++E V+R ++    N +  +  F
Sbjct: 297 QFARCFRDEDLRADRQP-EFTQLDLEMSFATGEDVMKSIEKVVRKLWSSLLNIDLGTQPF 355

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
            R+ Y +A+ R+G+DKPD R  + M  V   ++     V       +P  E + + ++  
Sbjct: 356 TRMPYQEAMGRFGSDKPDTR--LGMEIVRLDYMLPVDLVQKITPLTDPIVEGFKLESEDN 413

Query: 335 GGNRA------FCDRMN--EWARS-QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE 385
             ++       F D     E+ ++  G PG+ +++   D    + G+ P          E
Sbjct: 414 DPSKTLELVTRFLDSPAGVEFNKNPDGGPGI-FVY---DAKKPLRGLMP----FGFEAAE 465

Query: 386 AIRVRLDMQDGDSCFFIAGDPLKFCSFAA---DARNHIAQE---LGIINC-NCFEFCWIM 438
            +   L+   GD     A     F   +    D R  +  E    G+      F F W++
Sbjct: 466 RVEELLEPDHGDLIVLQARKNAPFSGGSTPLGDLRKALHSEAVKAGVKEAPKGFNFLWVV 525

Query: 439 DFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFE 490
           DFP +   +E +        +   H+PFT P+   +  L   D  ++ A  YDL+ NG E
Sbjct: 526 DFPLFSPIDENEPGQGGTAGLASTHHPFTAPKSAADVDLMVADPAAVVADHYDLIVNGVE 585

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           +  G  R H + V    F ++          F  L  A + G PPH GIA G DR++ ++
Sbjct: 586 LGGGSRRIHDARVQEIVFRDILKMPASRLTEFSHLLEALKAGCPPHAGIALGFDRLIAIM 645

Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           LG ++VR+V  FP S    D+++GSPS +S + L    LR+
Sbjct: 646 LGKESVRDVIAFPKSGKGEDVMVGSPSELSEDVLNTYHLRL 686


>gi|238491530|ref|XP_002377002.1| aspartyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
 gi|220697415|gb|EED53756.1| aspartyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
          Length = 560

 Score =  226 bits (577), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 186/587 (31%), Positives = 286/587 (48%), Gaps = 74/587 (12%)

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
           Q+V+   +   E  K+VR+   + + G V ++ A+       T   E+    I  L+   
Sbjct: 6   QLVSLAKNGALEKLKAVRANSPVAVRGKVKAKQAKGSEMEK-TDPWEIQVDDIRTLN--- 61

Query: 109 ELPLPVFGERE--YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAEN 160
           + P  +  + +  +P     K RFL LR D+  ++ ++ R ++ N  +     CR     
Sbjct: 62  DFPSDIIMKSDTVFPP----KQRFLQLRSDSELRDALRFRAQVHNVCKEELEQCR---PP 114

Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
           F+E  TP+L  S+PEGAR+FLVP+R  +G  YALPQ+PQQYKQ+LMASG  RYFQ A CF
Sbjct: 115 FVEIETPLLFKSTPEGAREFLVPTR-KRGLAYALPQSPQQYKQILMASGIPRYFQFARCF 173

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
           RDED R+DR P EF QLDMEMSF   +D++ T+E ++R ++         S  F R+ Y 
Sbjct: 174 RDEDLRADRQP-EFTQLDMEMSFATGEDVMRTVEGIIRRLWSTLMKDPAPSGPFQRMSYQ 232

Query: 281 DAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN-PGYEVWAI------PAKG 333
           DA+ RYG+DKPD R  + +  + EH +  +  + SKI  +  P  EV+ +      PA  
Sbjct: 233 DAMSRYGSDKPDTRFGMEISRI-EHLLPVD--LVSKITPLTLPIVEVFKLENNENDPAAM 289

Query: 334 GGGNRAFCDRMNEWA---RSQGQPGLAYIFWRLDESGNVAGMGPVA-------------K 377
                 F D           +G PG+ +++   D    + G+ P                
Sbjct: 290 SEFISQFLDSPAGVPFNNNPEGGPGI-FVY---DAKKPLCGLQPFGFEAAEYLEELLELD 345

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
           H +++  +A R +     G +     GD  +    AA +        G      F+F WI
Sbjct: 346 HGDLIVIQA-REKAPFSGGSTPI---GDLRRALHSAAVSSGFKPAPTG------FDFRWI 395

Query: 438 MDFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGF 489
           +DFP +  + + +        I   H+PFT P+   +  L   D   + A  YDLV NG 
Sbjct: 396 VDFPLFSPSSDSEPGQGGAAGISSTHHPFTAPKTAADVDLLLTDPTKVVADHYDLVVNGV 455

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           E+  G  R H  +  +Q F    I +   E    F  L  A + G PPH G+A G DR+V
Sbjct: 456 ELGGGSRRIH--DATVQEFILRDILQMPAERLADFSHLLEALRAGCPPHAGLALGFDRLV 513

Query: 548 MLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            ++LG ++VR+V  FP + +   D ++ +PS ++ E L    L++ E
Sbjct: 514 AVMLGKESVRDVIAFPKIGKVGEDPMVKAPSVMTEEALETYHLQLKE 560


>gi|327296417|ref|XP_003232903.1| aspartyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326465214|gb|EGD90667.1| aspartyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 685

 Score =  226 bits (576), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 193/616 (31%), Positives = 292/616 (47%), Gaps = 69/616 (11%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRD---HYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           G  V + G++ + +  G  + F+ + D      +  VV+NP S      KS+     + +
Sbjct: 91  GRPVTIHGYIGKRKKIGKNMTFVRLSDPTLSRSVQIVVSNPHS--LNALKSIEPNSAVVV 148

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF------- 126
            G+V S+ +++        Q   S  K E+  V  EL   V    E+P+ I         
Sbjct: 149 SGIVKSKESQS--------QFRESGDKCELDGVEIEL-QDVQCLNEFPKDIIITPDTVFP 199

Query: 127 -KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFL 181
              R L +R D +L + +  R +   ++R R + E    F+E  TPIL  S+PEGAR+FL
Sbjct: 200 PSKRHLQIRNDPSLRQTLAFRAKANAALR-RALEECEPPFLEIETPILFKSTPEGAREFL 258

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R NQG  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLDMEM
Sbjct: 259 VPTR-NQGLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEM 316

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF   +D++ T E +++ ++            F R+ Y +A+  YG+DKPD R  + +H 
Sbjct: 317 SFATAEDVITTTEALVKKLWASVMPEPLGPEPFHRMSYYEAMGSYGSDKPDTRFDMKLHR 376

Query: 302 VTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGN----RAFCDRMNE------WARS 350
           V E ++ ++F    KI S+N P  E + +  KG G      R     MN           
Sbjct: 377 V-EQYLPADF--IGKISSLNSPVVEAFIV--KGNGHPEETMRVLRSFMNTPEAKDFLDNP 431

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
            G PG     + +D S  + G+   A      + E +      + GD  FF       F 
Sbjct: 432 DGAPGT----FVIDSSKPMGGLS-AAGFEGAWDLETL---FKSEHGDLIFFQCRKDEPFS 483

Query: 411 ---SFAADARNHIAQ---ELGIINCNC-FEFCWIMDFPFYEWNEEEKK-------IDFAH 456
              + A + R  + Q   E G ++    F+F W+  FP +  + E +        I   H
Sbjct: 484 GGLTKAGELRLAVHQYMVEKGFLSPPVGFDFHWVTGFPLFSPSVETEPGQGGTAGIASTH 543

Query: 457 NPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           +PFT P+   + +L   D     A  YDLV NG E+  G  R H + V      ++    
Sbjct: 544 HPFTAPRTAEDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSAAVQEFVLRDILRVP 603

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
                 F  L    + G PPH GIA G DR++ ++ G ++VR V  FP      D ++ +
Sbjct: 604 PSRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTQSVRNVIAFPKGNKGEDPMVKT 663

Query: 576 PSTVSVEQLRELGLRI 591
           PS ++ + L+   L++
Sbjct: 664 PSPMTEDSLQTYHLQL 679


>gi|38567122|emb|CAE76417.1| related to aspartate--tRNA ligase, mitochondrial (fragment)
           [Neurospora crassa]
          Length = 683

 Score =  226 bits (575), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 172/537 (32%), Positives = 257/537 (47%), Gaps = 75/537 (13%)

Query: 119 EYPESIR-FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           ++P S R  + RF     D L   ++ R +I   +R  +   +F E  TPIL  S+PEGA
Sbjct: 153 QFPASARHLQIRF----SDPLRSRLLARPQIGFQLRKTLNDLDFTEVETPILFKSTPEGA 208

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R+FLVP+R  +G  YALPQ+PQQYKQ+LM+SG   Y+Q A CFRDED R+DR P EF QL
Sbjct: 209 REFLVPTR-RRGLAYALPQSPQQYKQILMSSGIRGYYQFARCFRDEDLRADRQP-EFTQL 266

Query: 238 DMEMSFVEQDDILNTMENVLRGVF---------------------EEFSNGNTVSNN--- 273
           D+EM F   +D++ T+E ++  +                       + +NG +  N    
Sbjct: 267 DLEMGFATGEDVMRTVETLVTQLLPALNAQFNVIRQGDDIYPVPKRDLNNGESTENGDHQ 326

Query: 274 -------FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEV 326
                  FLR+ YD+A+ R+G DKPDLR P  +H V +H + ++F V     +  P  E 
Sbjct: 327 WPEPTAPFLRLTYDEAMTRFGIDKPDLRIPFELHRV-DHVLPAQF-VSMITHTEQPIVEA 384

Query: 327 WAI-PAKGG-----GGNRAFCDR-MNEWAR-----SQGQPGLAYIFWRLDESGNVAGMGP 374
           + I P   G     G    F D+ M++  +       G P  A +F        ++ +G 
Sbjct: 385 FRIRPQFDGETVTPGTIAEFVDKLMDQLPKPLANNPDGAPA-ALMFNSKKPLCGLSSLG- 442

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF----CSFAADARNHIAQEL---GII 427
                 + + EA     D++DGD   F A     F     +    AR H  +     G++
Sbjct: 443 FEGFDALTSMEAFS---DLEDGDVLVFQARKNAPFQGEGSTALGVARTHFYRSFVSAGLL 499

Query: 428 NCNC-FEFCWIMDFPFYEWNE-------EEKKIDFAHNPFTMP--QGGMESLKGNDLLSI 477
             +   +F W+++FP +  ++        +      H+PFT P  +  +E L   D L  
Sbjct: 500 PQSFDLKFLWVVNFPMFTPDDGIDPGQGGQAGFKATHHPFTAPLTEADVEML-ATDPLKA 558

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG E+  G  R H+S +      N+    +    +F  L  A + G PPH 
Sbjct: 559 RADHYDLVVNGVELGGGSRRIHLSSMQEYVMRNILKMTDAGLAQFSHLLEALRAGCPPHA 618

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G A G DR+V +L    +VR+V  FP S    DL + SPS ++ +QL    L I + 
Sbjct: 619 GFALGFDRLVAILTHTDSVRDVIAFPKSMKGEDLTVKSPSKMTAQQLETYHLAIAKK 675


>gi|164427859|ref|XP_965716.2| hypothetical protein NCU02585 [Neurospora crassa OR74A]
 gi|157071912|gb|EAA36480.2| hypothetical protein NCU02585 [Neurospora crassa OR74A]
          Length = 644

 Score =  226 bits (575), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 172/537 (32%), Positives = 257/537 (47%), Gaps = 75/537 (13%)

Query: 119 EYPESIR-FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           ++P S R  + RF     D L   ++ R +I   +R  +   +F E  TPIL  S+PEGA
Sbjct: 114 QFPASARHLQIRF----SDPLRSRLLARPQIGFQLRKTLNDLDFTEVETPILFKSTPEGA 169

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R+FLVP+R  +G  YALPQ+PQQYKQ+LM+SG   Y+Q A CFRDED R+DR P EF QL
Sbjct: 170 REFLVPTR-RRGLAYALPQSPQQYKQILMSSGIRGYYQFARCFRDEDLRADRQP-EFTQL 227

Query: 238 DMEMSFVEQDDILNTMENVLRGVF---------------------EEFSNGNTVSNN--- 273
           D+EM F   +D++ T+E ++  +                       + +NG +  N    
Sbjct: 228 DLEMGFATGEDVMRTVETLVTQLLPALNAQFNVIRQGDDIYPVPKRDLNNGESTENGDHQ 287

Query: 274 -------FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEV 326
                  FLR+ YD+A+ R+G DKPDLR P  +H V +H + ++F V     +  P  E 
Sbjct: 288 WPEPTAPFLRLTYDEAMTRFGIDKPDLRIPFELHRV-DHVLPAQF-VSMITHTEQPIVEA 345

Query: 327 WAI-PAKGG-----GGNRAFCDR-MNEWAR-----SQGQPGLAYIFWRLDESGNVAGMGP 374
           + I P   G     G    F D+ M++  +       G P  A +F        ++ +G 
Sbjct: 346 FRIRPQFDGETVTPGTIAEFVDKLMDQLPKPLANNPDGAPA-ALMFNSKKPLCGLSSLG- 403

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF----CSFAADARNHIAQEL---GII 427
                 + + EA     D++DGD   F A     F     +    AR H  +     G++
Sbjct: 404 FEGFDALTSMEAFS---DLEDGDVLVFQARKNAPFQGEGSTALGVARTHFYRSFVSAGLL 460

Query: 428 NCNC-FEFCWIMDFPFYEWNE-------EEKKIDFAHNPFTMP--QGGMESLKGNDLLSI 477
             +   +F W+++FP +  ++        +      H+PFT P  +  +E L   D L  
Sbjct: 461 PQSFDLKFLWVVNFPMFTPDDGIDPGQGGQAGFKATHHPFTAPLTEADVEML-ATDPLKA 519

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG E+  G  R H+S +      N+    +    +F  L  A + G PPH 
Sbjct: 520 RADHYDLVVNGVELGGGSRRIHLSSMQEYVMRNILKMTDAGLAQFSHLLEALRAGCPPHA 579

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G A G DR+V +L    +VR+V  FP S    DL + SPS ++ +QL    L I + 
Sbjct: 580 GFALGFDRLVAILTHTDSVRDVIAFPKSMKGEDLTVKSPSKMTAQQLETYHLAIAKK 636


>gi|119180393|ref|XP_001241672.1| hypothetical protein CIMG_08835 [Coccidioides immitis RS]
          Length = 684

 Score =  223 bits (568), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 181/582 (31%), Positives = 289/582 (49%), Gaps = 61/582 (10%)

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAE--------TINANIITGQIELSAQK 100
           QV++   S  F+  +S+ +   + + G++ S+ A         T++       +E++ + 
Sbjct: 121 QVISFSKSEAFDKLRSIEANSPVVVRGILQSKIANSKGHTQEPTVDTEGNINSVEIALED 180

Query: 101 IEILSVAEELPLPVF--GEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMR--CR 155
           ++ L+   + P  +    E  +P     + R+L +R D  L + +  R R    +R    
Sbjct: 181 VQCLN---DFPKDIIMTSETVFPA----EKRYLQIRNDKDLRQALAFRARANKVLREVLE 233

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
                F+E  TP+L  S+PEGAR+FLVP+R   G  YALPQ+PQQYKQ+LM+SG  RY+Q
Sbjct: 234 QCDPPFMEVETPLLFKSTPEGAREFLVPTR-RPGLAYALPQSPQQYKQILMSSGVPRYYQ 292

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            A CFRDED R+DR P EF QLDMEMSF   +D+++T+E V+R ++         ++ F 
Sbjct: 293 FAHCFRDEDLRADRQP-EFTQLDMEMSFARGEDVMSTIEQVIRKLWSTLMPEQLDASPFP 351

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGG 334
           R+ Y++A+ +YG+DKPDLR  + +  V ++ +  +  + +KI  ++ P  E+  +  KG 
Sbjct: 352 RMTYNEAMSKYGSDKPDLRIGMEIRRV-DYMIPVD--LVNKITDLSAPIVEITKL--KGN 406

Query: 335 GG---NRAFCDRMNEWARS-------QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
           G     R F     +   +       +G PG+ ++F   D S  ++G+    +      T
Sbjct: 407 GDPIETRQFVTSFLDSPEASEFINNPEGGPGV-FVF---DSSKPLSGL----QAFGFEAT 458

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAA---DARNHI---AQELGIINCNC-FEFCWI 437
            A+   LD+ DGD     A     F   +    D R  I   A E G       F F W+
Sbjct: 459 WALENDLDLNDGDLLILQARQNAPFSGGSTPLGDLRRAIHKAAVETGFKAAPTGFHFLWV 518

Query: 438 MDFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGF 489
             FP +  + + +        I   H+PFT P    + SL   D     A  YD+V NG 
Sbjct: 519 THFPLFSPSSDSEPGQGGTAGIASTHHPFTAPLTPEDVSLLLTDPTKATADHYDIVVNGV 578

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G  R H +EV      ++    E     F  L  A + G PPH GIA G DR++ +
Sbjct: 579 ELGGGSRRIHSAEVQEFILRDILKMPESRLADFSHLLDALRAGCPPHAGIALGFDRLIAV 638

Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +LG ++VR+V  FP S    D+++ +PS ++ E L    L++
Sbjct: 639 MLGKESVRDVIAFPKSGKGEDVMVRTPSEMTEEALETYHLQL 680


>gi|167464001|ref|ZP_02329090.1| aspartyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 358

 Score =  222 bits (565), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/361 (36%), Positives = 199/361 (55%), Gaps = 9/361 (2%)

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+E SF+ QD +L+ ME ++  +  E + G  VS  F R+ Y +A+ +YG+DKPDLR  +
Sbjct: 1   DIETSFLSQDQLLDMMEELMVKLVRE-TVGVEVSRPFQRLTYAEAMDKYGSDKPDLRFGM 59

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGL 356
            + +++     SE +VFS  L    G EV A+ AKG G  +R   D +  +A   G  GL
Sbjct: 60  ELVDLSGLLADSEAKVFSAALKT--GGEVKALNAKGCGTWSRKEIDDLAPFAMRYGAKGL 117

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  +    G + G  P+ K ++     AIR RL  ++GD   F A           + 
Sbjct: 118 AWIQIK---EGQMKG--PIVKFMSEEEQTAIRERLRAEEGDLLLFSADTKKIVADVLGNL 172

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  I + LG+I+ + F+F W++DFP   ++EE+K+    H+PFT P+     L  +D   
Sbjct: 173 RLKIGRRLGLIDDSIFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKDEDLDLFDSDPGQ 232

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I+   YDLV NG+E+  G  R    +V  + F  +G S+E  +++FG L  AF+ G PPH
Sbjct: 233 IRGQAYDLVLNGYEVGGGSQRIFKRDVQEKMFKALGFSQEEAKDKFGYLLDAFEYGTPPH 292

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA G DR+VMLL G  N+RE   FP + +   LLM +P  V   QL +L ++I+   K
Sbjct: 293 GGIAFGFDRLVMLLAGRSNLRETIAFPKTASATCLLMDAPGEVDAGQLEQLSIKIMGKRK 352

Query: 597 K 597
           K
Sbjct: 353 K 353


>gi|303321267|ref|XP_003070628.1| aspartyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240110324|gb|EER28483.1| aspartyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 688

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 189/623 (30%), Positives = 304/623 (48%), Gaps = 66/623 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG---GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           L    +G  V L G++ R    G     + L         QV++   S  F+  +S+ + 
Sbjct: 85  LDTQGLGKRVTLHGYLGRRTDIGKKMSFVRLSNPSLTQTVQVISFSKSEAFDKLRSIEAN 144

Query: 69  WVLCIDGLVMSRSAE--------TINANIITGQIELSAQKIEILSVAEELPLPVF--GER 118
             + + G++ S+ A         T++       +E++ + ++ L+   + P  +    E 
Sbjct: 145 SPVVVRGILRSKIASSKGHTQEPTVDTEGNINSVEIALEDVQCLN---DFPKDIIMTSET 201

Query: 119 EYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSP 174
            +P     + R+L +R D  L + +  R R    +R  ++ E    F+E  TP+L  S+P
Sbjct: 202 VFPA----EKRYLQIRNDKDLRQALAFRARANKVLR-EVLEECDPPFMEVETPLLFKSTP 256

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EGAR+FL+P+R   G  YALPQ+PQQYKQ+LM+SG  RY+Q A CFRDED R+DR P EF
Sbjct: 257 EGAREFLIPTR-RPGLAYALPQSPQQYKQILMSSGVPRYYQFAHCFRDEDLRADRQP-EF 314

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            QLDMEMSF   +D+++T+E V+R ++         ++ F R+ Y++A+ +YG+DKPDLR
Sbjct: 315 TQLDMEMSFARGEDVMSTIEQVIRKLWSTLMPEQLDASPFPRMTYNEAMSKYGSDKPDLR 374

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGG---NRAFCDRMNEWARS 350
             + +  V ++ +  +  + +KI  ++ P  E+  +  KG G     R F     +   +
Sbjct: 375 IGMEIRRV-DYMIPVD--LVNKITDLSAPIVEITKL--KGNGDPIETRQFVTSFLDSPEA 429

Query: 351 -------QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403
                  +G PG+ ++F   D S  ++G+    +      T A+   LD+ DGD     A
Sbjct: 430 SEFINNPEGGPGV-FVF---DSSKPLSGL----QAFGFEATWALENDLDLNDGDLLILQA 481

Query: 404 GDPLKFCSFAA---DARNHI---AQELGIINCNC-FEFCWIMDFPFYEWNEEEKK----- 451
                F   +    D R  I   A E G       F F W+  FP +  + + +      
Sbjct: 482 RQNAPFSGGSTPLGDLRRAIHKAAVETGFKPAPTGFHFLWVTHFPLFSASSDSEPGQGGT 541

Query: 452 --IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
             I   H+PFT P    + SL   D     A  YD+V NG E+  G  R H +EV     
Sbjct: 542 AGIASTHHPFTAPLTPEDVSLLLTDPTKATADHYDIVVNGVELGGGSRRIHSAEVQEFIL 601

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            ++    E     F  L  A + G PPH GIA G DR++ ++LG ++VR+V  FP S   
Sbjct: 602 RDILKMPESRLADFSHLLDALRAGCPPHSGIALGFDRLIAVMLGKESVRDVIAFPKSGKG 661

Query: 569 CDLLMGSPSTVSVEQLRELGLRI 591
            D+++ +PS ++ E L    L++
Sbjct: 662 EDVMVRTPSEMTEEALETYHLQL 684


>gi|320035890|gb|EFW17830.1| aspartyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 688

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 189/623 (30%), Positives = 304/623 (48%), Gaps = 66/623 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG---GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           L    +G  V L G++ R    G     + L         QV++   S  F+  +S+ + 
Sbjct: 85  LDTQGLGKRVTLHGYLGRRTDIGKKMSFVRLSNPSLTQTVQVISFSKSEAFDKLRSIEAN 144

Query: 69  WVLCIDGLVMSRSAE--------TINANIITGQIELSAQKIEILSVAEELPLPVF--GER 118
             + + G++ S+ A         T++       +E++ + ++ L+   + P  +    E 
Sbjct: 145 SPVVVRGILRSKIASSKGHTQEPTVDTEGNINSVEIALEDVQCLN---DFPKDIIMTSET 201

Query: 119 EYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSP 174
            +P     + R+L +R D  L + +  R R    +R  ++ E    F+E  TP+L  S+P
Sbjct: 202 VFPA----EKRYLQIRNDKDLRQALAFRARANKVLR-EVLEECDPPFMEVETPLLFKSTP 256

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EGAR+FL+P+R   G  YALPQ+PQQYKQ+LM+SG  RY+Q A CFRDED R+DR P EF
Sbjct: 257 EGAREFLIPTR-RPGLAYALPQSPQQYKQILMSSGVPRYYQFAHCFRDEDLRADRQP-EF 314

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            QLDMEMSF   +D+++T+E V+R ++         ++ F R+ Y++A+ +YG+DKPDLR
Sbjct: 315 TQLDMEMSFARGEDVMSTIEQVIRKLWSTLMPEQLDASPFPRMTYNEAMSKYGSDKPDLR 374

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGG---NRAFCDRMNEWARS 350
             + +  V ++ +  +  + +KI  ++ P  E+  +  KG G     R F     +   +
Sbjct: 375 IGMEIRRV-DYMIPVD--LVNKITDLSAPIVEITKL--KGNGDPIETRQFVTSFLDSPEA 429

Query: 351 -------QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403
                  +G PG+ ++F   D S  ++G+    +      T A+   LD+ DGD     A
Sbjct: 430 SEFINNPEGGPGV-FVF---DSSKPLSGL----QAFGFEATWALENDLDLNDGDLLILQA 481

Query: 404 GDPLKFCSFAA---DARNHI---AQELGIINCNC-FEFCWIMDFPFYEWNEEEKK----- 451
                F   +    D R  I   A E G       F F W+  FP +  + + +      
Sbjct: 482 RQNAPFSGGSTPLGDLRRAIHKAAVETGFKPAPTGFHFLWVTHFPLFSPSSDSEPGQGGT 541

Query: 452 --IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
             I   H+PFT P    + SL   D     A  YD+V NG E+  G  R H +EV     
Sbjct: 542 AGIASTHHPFTAPLTPEDVSLLLTDPTKATADHYDIVVNGVELGGGSRRIHSAEVQEFIL 601

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            ++    E     F  L  A + G PPH GIA G DR++ ++LG ++VR+V  FP S   
Sbjct: 602 RDILKMPESRLADFSHLLDALRAGCPPHSGIALGFDRLIAVMLGKESVRDVIAFPKSGKG 661

Query: 569 CDLLMGSPSTVSVEQLRELGLRI 591
            D+++ +PS ++ E L    L++
Sbjct: 662 EDVMVRTPSEMTEEALETYHLQL 684


>gi|307135961|gb|ADN33821.1| aspartyl-tRNA synthetase [Cucumis melo subsp. melo]
          Length = 460

 Score =  221 bits (564), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/388 (35%), Positives = 211/388 (54%), Gaps = 31/388 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT  CG+L V DVG  VRL GWV   R HGG+ FL++RDH GI QV   P+   F  A S
Sbjct: 81  RTALCGELSVDDVGKRVRLCGWVALHRVHGGLTFLNLRDHSGIVQVTTLPNE--FPDAHS 138

Query: 65  ----VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGERE 119
               +R E+V+ ++G V SR  +++N  + TG IE++A+ ++IL SV  +LP  V    +
Sbjct: 139 AINDLRLEYVVAVEGTVRSRPGDSVNVKMKTGFIEVAAEHVQILNSVGSKLPFLVTTADD 198

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +S + + R L LRR      + K   II    CR+                  E   D
Sbjct: 199 AKDSAKEEIR-LRLRRQYFLDLLRKALEII---WCRL------------------EFRSD 236

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
            +    +  G+F+ALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF QLDM
Sbjct: 237 SIYMYILKPGTFFALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQLDM 295

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E+SF   +D+L   E+++R VF E   G  + N F R+ Y +A+ RYG+D+PD R  + +
Sbjct: 296 ELSFTTLEDMLRLNEDLIRKVFWEV-KGVQLPNPFPRLTYAEAMSRYGSDRPDTRFDLQL 354

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++V++ F  S F+VF+  LS     +V  +P+     +     + + +  +         
Sbjct: 355 NDVSDIFADSPFKVFADALSSGGIIKVLCVPSGAKRYSNTALKKGDIYTEAMKSGAKGLP 414

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAI 387
           F ++ + G +  +  ++  L +   E +
Sbjct: 415 FLKVTDDGTIPSLLKISNMLKMSIVEMV 442


>gi|165971540|gb|AAI58403.1| LOC100145033 protein [Xenopus (Silurana) tropicalis]
          Length = 403

 Score =  220 bits (560), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 141/405 (34%), Positives = 210/405 (51%), Gaps = 19/405 (4%)

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQQ+KQLL+  G DRYFQIA C+RDE  + DR P EF Q+D+EMSFV+Q  I + +E 
Sbjct: 1   QSPQQFKQLLIIGGLDRYFQIARCYRDEGSKPDRQP-EFTQVDIEMSFVDQAGIQSLVEG 59

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           +LR  + E      +   F  + Y DA+  YG DKPD R  + + +VT  F   +     
Sbjct: 60  MLRFSWPE--EKGPLQAPFPVMSYADAMSSYGVDKPDTRFEMKIQDVTSQFREVQLGYVQ 117

Query: 316 KILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMG 373
           + L   P   V AI   GG     R   D M E  + Q    +  +  R D S       
Sbjct: 118 ETLR-KPHGCVKAICIPGGAKFIKRKELDSMQELVKQQYNQEVVPVILRADSSWK----S 172

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL-----GIIN 428
           P+ K L+    E++   ++ +  D   F AG+ ++ CS     R   A +L      + +
Sbjct: 173 PLEKFLSAKLKESLTEAMEAKSEDILLFAAGEHIRACSALGKLRLDAAAQLEEYGVPLRD 232

Query: 429 CNCFEFCWIMDFPFYEWNEE-EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F F W++DFP +   E+ E +++ AH+PFT P     +L   D   +++  YDLV N
Sbjct: 233 PTAFHFLWVVDFPLFLPKEDNELELESAHHPFTAPHPEDTALLHTDPAKVRSQHYDLVLN 292

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G E+  G IR H S   LQ +    + KE V +    L  A Q G PPHGGIA G+DR++
Sbjct: 293 GSEVGGGSIRIHNSN--LQRWVLQDVLKEDV-SLLSHLLEALQSGAPPHGGIALGLDRLI 349

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            +++GA ++R+V  FP S    DL+  +P  VS E L++  ++++
Sbjct: 350 AIIVGAPSIRDVIAFPKSFRGRDLMSNAPDMVSAEDLQQYHIQVI 394


>gi|169595894|ref|XP_001791371.1| hypothetical protein SNOG_00694 [Phaeosphaeria nodorum SN15]
 gi|160701182|gb|EAT92189.2| hypothetical protein SNOG_00694 [Phaeosphaeria nodorum SN15]
          Length = 501

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 161/481 (33%), Positives = 242/481 (50%), Gaps = 44/481 (9%)

Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R L LR ++ L  N++ R + +   R  +    + E  TPIL  S+PEGAR+FLVP+R  
Sbjct: 49  RHLQLRTNSQLRNNLLFRAQKVLEARVHLNEHEWTEIETPILFKSTPEGAREFLVPTR-E 107

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           +G  YALPQ+PQQYKQ+LMASG  +YFQ A CFRDED R+DR P EF QLDMEM+F  ++
Sbjct: 108 KGLAYALPQSPQQYKQILMASGLTKYFQFARCFRDEDLRADRQP-EFTQLDMEMAFAGEE 166

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
           D++   E +L+ ++++   G      F R+ Y +A+  YG+DKPDLR         E  V
Sbjct: 167 DVMAQTERLLQSIWKKNDKG----ERFPRMKYQEAMSSYGSDKPDLR--------YEAKV 214

Query: 308 HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366
              F++    +S +P      + +       + + D         GQPG+    +  D S
Sbjct: 215 IDAFKI---PMSGDPKTTRKFVASFLDSPDGKVYLD------NPHGQPGI----FIGDLS 261

Query: 367 GNVAGMGPVAKHLNIVNTEAIRVR----LDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             + G+GP+     +     + V     L +Q   +     G  +      A  +  IAQ
Sbjct: 262 QPMQGLGPLGYPYVMEGPPGLAVEHGDLLVLQARPNAPLSGGSTMLGNLRLALYKAAIAQ 321

Query: 423 EL-GIINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGND 473
           +L    + + ++F WI DFP +  N +              H+PFT P+   +  L   D
Sbjct: 322 DLIDPPSPDDYQFLWITDFPLFTPNNDSDPGQGGSSGFSSTHHPFTAPKTPADVDLLLTD 381

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-VGISKEVVENRFGGLYRAFQCG 532
                A  YD+V NG E+  G  R H + V    F + + +  E +E+ F  L      G
Sbjct: 382 PSRAIAAHYDIVVNGVELGGGSRRIHNAAVQEFIFRDALKMKPERIED-FRHLLNVLASG 440

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPH GIA G DR++ ++ G+++VR+V  FP S    D L+ SP+ V+ EQL    L++ 
Sbjct: 441 CPPHAGIALGWDRLIAVMRGSESVRDVIAFPKSGRGEDGLVKSPNRVTEEQLDTYHLKLK 500

Query: 593 E 593
           E
Sbjct: 501 E 501


>gi|289428129|ref|ZP_06429831.1| nucleic acid-binding domain protein [Propionibacterium acnes J165]
 gi|289158672|gb|EFD06874.1| nucleic acid-binding domain protein [Propionibacterium acnes J165]
          Length = 239

 Score =  218 bits (556), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 110/238 (46%), Positives = 155/238 (65%), Gaps = 1/238 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMS
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMS 239


>gi|255936415|ref|XP_002559234.1| Pc13g08090 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583854|emb|CAP91878.1| Pc13g08090 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 682

 Score =  218 bits (556), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 181/582 (31%), Positives = 276/582 (47%), Gaps = 64/582 (10%)

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT---GQIELSAQKIEILS 105
           QVVA   +  FE  K++ +   + + G V  +     +    T    Q EL+ ++I  L+
Sbjct: 124 QVVAFAKNDAFEQLKTINANSPVAVRGTVQKKKKTKPSEGDNTPAQDQWELALEEIHPLN 183

Query: 106 VAEELPLPVF--GEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAEN-- 160
              + P  +    E  +P     + R+L LR D  L K +  R R  N   C+   E   
Sbjct: 184 ---DFPKEIIMTAETVFPP----EQRYLQLRSDAELRKALRFRARAHN--LCKKELEQCR 234

Query: 161 --FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
             F+E  TP+L  S+PEGAR+F+VP+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A 
Sbjct: 235 PPFVEIETPLLFKSTPEGAREFIVPTR-REGLAYALPQSPQQYKQILMASGLPRYYQFAR 293

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
           CFRDED R+DR P EF QLDMEMSF   DD++ T+E V+R ++            F ++ 
Sbjct: 294 CFRDEDLRADRQP-EFTQLDMEMSFATGDDVMRTVEGVIRRLWSSLMKDPAPEGPFRKVS 352

Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV-NPGYEVWAI------PA 331
           Y + + +YG+DKPD R  + +  + +H +  +  + SKI  + NP  E + +      PA
Sbjct: 353 YQEVMAKYGSDKPDTRYGMEIIRL-DHVLPVD--LVSKISGLTNPVVEAFKLEGNDNDPA 409

Query: 332 KGGGGNRAFCDRMNEWA---RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIR 388
           +       F D            G PG+ +I+   +    + G+ P          E + 
Sbjct: 410 ETHKFITQFLDSPAGAPFNDNPDGGPGV-FIY---NGKQPLCGLQP----FGFEAAEQVE 461

Query: 389 VRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC--------FEFCWIMDF 440
             LD   GD    +   P    S  +     + + L   +           F+F W++ F
Sbjct: 462 ELLDPDHGD-LIILQARPRAPFSGGSTPVGDLRRALHAASVTAGFKPAPTGFDFLWVVGF 520

Query: 441 PFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIA 492
           P +    + +            H+PFT P+   +  L   D     A  YDLV NG E+ 
Sbjct: 521 PLFSPTSDSEPGQGGAAGFSSTHHPFTAPKTPADVDLLLTDPTKAVADHYDLVVNGVELG 580

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVEN--RFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
            G  R H  +  +Q F    I K   E    F  L  A + G PPH G+A G DR+V ++
Sbjct: 581 GGSRRIH--DAAVQEFIFRDILKMPAERLADFSHLLDALRSGCPPHAGLALGFDRLVAVM 638

Query: 551 LGAKNVREVSLFPMS-QNFCDLLMGSPSTVSVEQLRELGLRI 591
           LG ++VR+V  FP + +   D ++G+PS ++ E L+   L++
Sbjct: 639 LGKESVRDVIAFPKTGKGGDDAMVGAPSLMTEEALKTYHLKL 680


>gi|258578065|ref|XP_002543214.1| hypothetical protein UREG_02730 [Uncinocarpus reesii 1704]
 gi|237903480|gb|EEP77881.1| hypothetical protein UREG_02730 [Uncinocarpus reesii 1704]
          Length = 690

 Score =  217 bits (553), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 176/578 (30%), Positives = 273/578 (47%), Gaps = 53/578 (9%)

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVM--------SRSAETINANIITGQIELSAQK 100
           Q ++   +  F+  KS+     + + G++         S+ A  ++       +E++ + 
Sbjct: 127 QAISFSKTDAFDKLKSIEPHSPVVLRGILQTKVTSAKESKQAPAVDKEGNINSLEIALED 186

Query: 101 IEILSVAEELPLPVFGEREYPESI-RFKYRFLDLRRD-TLHKNIVKRTRIINSMR--CRM 156
           I++L+   + P  +  +   PE++     RFL +R D  +   +  R R    +R     
Sbjct: 187 IQLLN---DFPNDIIMK---PETVFPAGKRFLQIRNDREIRHALAFRARAGKVLREALEQ 240

Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216
               F+E  TP+L  S+PEGAR+FLVP+R   G  YALPQ+PQQYKQ+LM+ G  RY+Q 
Sbjct: 241 CEPPFMEVETPLLFKSTPEGAREFLVPTR-RPGFAYALPQSPQQYKQILMSGGIPRYYQF 299

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           A CFRDED R+DR P EF QLD+EMSF   +D++N +E ++R ++            F R
Sbjct: 300 AHCFRDEDLRADRQP-EFTQLDLEMSFASGEDVMNVIERIVRQLWSALMPEPLNDAPFPR 358

Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI-----PA 331
           + Y +A+ +YG+DKPD R  + ++ V         R  + +   +P  EV  +     PA
Sbjct: 359 MTYYEAMSKYGSDKPDPRIGMEIYRVDYMIPVDLVRRITNL--SDPIVEVIKLKGNGDPA 416

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL 391
           K      +  D            G    F  +D +  + G+    +       + +   L
Sbjct: 417 KTKAFTSSILDAFVPSELINNPEGRPETFV-IDSAQPLFGL----QDFGFEAVDRLESEL 471

Query: 392 DMQDGDSCFFIA--GDPLKFCSFA-ADAR---NHIAQELGIINCNC-FEFCWIMDFPFYE 444
            + +GD     A    PL   S    D R   +  A E G       F F W+  FP + 
Sbjct: 472 GLDNGDLLVVQARRKAPLSGGSTPLGDLRRVLHKAATETGFKRAPTGFNFLWVTHFPLFS 531

Query: 445 WNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
            + + +        I   H+PFT P G  +  L   D   + A  YDLV NG E+  G  
Sbjct: 532 PSSDTEPGQGGTAGIASTHHPFTAPLGPEDVDLLLTDPTKVVADHYDLVVNGVELGGGSR 591

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG---LYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           R H +EV  Q F    I K V ENR G    L  A + G PPH GIA G DR++ ++LG 
Sbjct: 592 RIHSAEV--QKFILRDILK-VPENRLGDFSHLLEALRAGCPPHAGIALGFDRLIAIMLGK 648

Query: 554 KNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           ++VR+V  FP S    D+++ +PS ++ + L    L++
Sbjct: 649 ESVRDVIAFPKSGKGEDVMVKTPSKMTEKALETYHLQL 686


>gi|300813740|ref|ZP_07094057.1| putative aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300512148|gb|EFK39331.1| putative aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 316

 Score =  216 bits (549), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/274 (43%), Positives = 174/274 (63%), Gaps = 7/274 (2%)

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  + +E+V+ + G+V  RS  +IN  I TG+IE+ A +I+IL+ ++  P+ V       
Sbjct: 2   ATKLHNEYVIAVKGIVRMRS--SINDKIPTGKIEVLASEIKILNESQVPPIYVKDNDNVA 59

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR LDLR+ ++ +N+  R++I    R       FIE  TP+LT  +PEGARD+L
Sbjct: 60  ENMRLKYRTLDLRKPSMLRNLKLRSKIYKITRDFFYDNGFIEVETPMLTKPTPEGARDYL 119

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ  KQLLM SG DRY QI  CFRDED R++R P EF Q+DME+
Sbjct: 120 VPSRVNSGKFYALPQSPQLMKQLLMVSGLDRYIQITKCFRDEDLRANRQP-EFTQIDMEL 178

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV +DD+++  E  L+ +F+E  + + +     R+ Y +A+ R+G DKPDLR  + + +
Sbjct: 179 SFVTEDDVMSINEKFLQKLFKEMLDID-IKLPLRRMKYSEAMDRFGVDKPDLRFGMELKD 237

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
           +++    S F+VF +  +V  G  V  I  K G 
Sbjct: 238 ISDIVKDSGFKVFEE--AVKDG-SVRGINVKNGA 268


>gi|121707085|ref|XP_001271727.1| aspartyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
 gi|119399875|gb|EAW10301.1| aspartyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
          Length = 678

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 176/584 (30%), Positives = 290/584 (49%), Gaps = 72/584 (12%)

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
           Q+V+   ++  E  KS+     + + G+V  + ++  +   +    E+   +I+ L+   
Sbjct: 123 QLVSFSKNSPLEKLKSINVNSPVAVRGIVQPKKSKGSDVEQLDS-WEIQVTEIDPLN--- 178

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAENFI 162
           E P  +   ++   +   ++R+L LR D+  ++ ++ R ++ N  +     CR     F+
Sbjct: 179 EFPKEIIMTQD--TTFAPEHRYLQLRSDSELRDALRFRAQVRNICKEELEECR---PPFV 233

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
           E  TP+L  S+PEGAR+FLVP+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRD
Sbjct: 234 EIETPLLFKSTPEGAREFLVPTR-RRGLAYALPQSPQQYKQILMASGIPRYYQFARCFRD 292

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           ED R+DR P EF QLDMEMSF   ++++ T+E ++R ++         S  F R+ Y +A
Sbjct: 293 EDLRADRQP-EFTQLDMEMSFSTGENVMRTVEGIIRRLWSSLMKDTAPSGPFRRMPYQEA 351

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS-VNPGYEVWAIPAKGGGGNR--A 339
           + RYG+DKPD R  + +  + ++ +  +  + +KI   V+P  E +      G  N   A
Sbjct: 352 MSRYGSDKPDTRFGMEISRI-DYLLPVD--LVNKITPLVDPIIEAFKF---EGNDNDPIA 405

Query: 340 FCDRMNEWARS----------QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV 389
             + + ++  S          +G PG+ +I+   D    ++G+ P          E I  
Sbjct: 406 ASEFIGQFLDSPAGAPFNNNPEGGPGI-FIY---DAKKPLSGLQP----FGFEAAEHIEE 457

Query: 390 RLDMQDGDSCFFIAGDPLKFCSFAA---DARN--HIAQELGIIN--CNCFEFCWIMDFPF 442
            LD   GD     A +   F   +    D R   H A            ++F W++DFP 
Sbjct: 458 LLDPDHGDLIVIQARERAPFAGGSTPIGDLRRALHTAAVTSGFKPAPTGYDFMWVVDFPL 517

Query: 443 YEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASG 494
           +  + + +        I   H+PFT P+   +  L   D     A  YDLV NG E+  G
Sbjct: 518 FSPSSDSEPGQGGAAGISSTHHPFTAPKTAADVDLLLTDPTKAVADHYDLVVNGVELGGG 577

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENR------FGGLYRAFQCGMPPHGGIAAGIDRIVM 548
             R H  +  +Q F    I +++++ R      F  L  A + G PPH G+A G DR+V 
Sbjct: 578 SRRIH--DAAVQEF----ILRDILQMRPERLADFSHLLDALRAGCPPHAGLALGFDRLVA 631

Query: 549 LLLGAKNVREVSLFPMS-QNFCDLLMGSPSTVSVEQLRELGLRI 591
           ++LG ++VR+V  FP + +   D ++ +PS ++ E L    L +
Sbjct: 632 VMLGKESVRDVIAFPKTGKGGEDAMVKAPSMMTEEALETYHLHL 675


>gi|154323340|ref|XP_001560984.1| hypothetical protein BC1G_00069 [Botryotinia fuckeliana B05.10]
 gi|150842298|gb|EDN17491.1| hypothetical protein BC1G_00069 [Botryotinia fuckeliana B05.10]
          Length = 736

 Score =  215 bits (547), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 189/667 (28%), Positives = 299/667 (44%), Gaps = 98/667 (14%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIR----DHYGITQVVAN-PDSA--- 57
           H    L   ++G  V ++G++H  +  G G+IF  I      + GI  V+ + P+     
Sbjct: 83  HPWEQLHSLNIGKRVTVTGFLHNKKQLGKGLIFATISRGSSANSGIQVVLKDSPEEGKIR 142

Query: 58  -CFEIAKSVRSEWVLCIDGLVMSR------SAETINANIIT---------------GQIE 95
             F+  K +R    + + G++ SR      +AE    + +T                  +
Sbjct: 143 DAFKSFKDIREHSAVSVTGILQSRVKKPDKTAEIAPDSPVTEGASDSTPLTRSQLLANFD 202

Query: 96  LSAQKIE-ILSVAEEL---PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
           + A+ +  I S   ++   P   FG    P+S   + RF       L++ ++ R+++   
Sbjct: 203 IHAEDVRAINSFPRDIIVGPAQKFG----PDSRHLEVRF----EPDLYERLMFRSKLAKL 254

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
           +R  + + +F E  TPIL  S+PEGAR+FLVP+R   G  YALPQ+PQQYKQ+LMASG  
Sbjct: 255 VRKYLYSVSFDEIETPILFKSTPEGAREFLVPTR-KPGYAYALPQSPQQYKQILMASGVT 313

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           +YFQ A CFRDED R+DR P EF Q+DMEMS+ +   ++ T+E +++    +  +    +
Sbjct: 314 KYFQFAKCFRDEDLRADRQP-EFTQIDMEMSWADGQYVMQTVEELVKSTHRQIQSEQLEA 372

Query: 272 --------NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
                    +F R+ Y++A+ ++G+DKPDLR   ++H V      +   + + I   NP 
Sbjct: 373 VHSLELPKTDFPRMTYEEAMSKHGSDKPDLRILDLIHRVDSIIPENLKGMMTSI--ENPI 430

Query: 324 YEVWAIPAKGGGGN-----RAFCDRMNE---WARSQGQPGLAYIFWRLDESGNVAGMGPV 375
            E       G         R F D  +         G PG+     R    G  A     
Sbjct: 431 IEACKFRLNGNSRKVQQFIRKFMDSADAETFQKNPDGPPGIFVFDPRRPLEGLQAFGFEG 490

Query: 376 AKHLNIVNTEAIRVRLDMQD----GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
           A+ L  + +       D  D      +  F  GD L   +      +  +  LG +    
Sbjct: 491 AETLKQLYSSLPSSSHDNNDPRGPDATSTFDEGDLLILQARPEAPHSGGSTTLGKLRLAL 550

Query: 432 FE---------------FCWIMDFPFYEWNEEEKK---------IDFAHNPFTMPQGGME 467
           ++               + W+ DFP +  N                  H+PFT P+   +
Sbjct: 551 YKAAISEQLLAPTPGFRYLWVTDFPLFTLNTANPTDPGQGGTSGFSSTHHPFTAPKTADD 610

Query: 468 -SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF---SNVGISKEVVENRFG 523
             L   D L++ A  YDLV NG E+  G  R H +E+  Q F   S + +S E + + F 
Sbjct: 611 IELLLTDPLAVTADHYDLVLNGVELGGGSKRIHSAEI--QKFIMKSVLKMSDERMSD-FN 667

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            L+ A + G PPH G A G DR V +L G ++VR+V  FP      D ++GSP  ++ EQ
Sbjct: 668 HLFEALRAGCPPHAGFAIGFDRWVAVLTGRESVRDVIFFPKGNKGEDAMVGSPGLITSEQ 727

Query: 584 LRELGLR 590
                L+
Sbjct: 728 EETYNLK 734


>gi|289428615|ref|ZP_06430299.1| putative aspartate--tRNA ligase [Propionibacterium acnes J165]
 gi|289158309|gb|EFD06528.1| putative aspartate--tRNA ligase [Propionibacterium acnes J165]
          Length = 387

 Score =  214 bits (544), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 139/386 (36%), Positives = 199/386 (51%), Gaps = 25/386 (6%)

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
           DED R+DR P EF QLD+EMSFV+QDD++   E  +   ++    G  +     RI + +
Sbjct: 1   DEDFRADRQP-EFTQLDVEMSFVDQDDVIALAEETMAACWKII--GVDMPTPLPRITWHE 57

Query: 282 AIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
           A+ RYG+DKPDLR    +  VT+ F ++ FRVF       P      +P       R F 
Sbjct: 58  AMDRYGSDKPDLRFGNEITEVTDFFANTAFRVFQA-----PYVGAVVMPGGASLPRRQF- 111

Query: 342 DRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
           D   EWAR++G  GLAYI   + + G     GPVAK+++      I  ++  + GD+ FF
Sbjct: 112 DAWQEWARTRGAKGLAYI--TISDEG--VPEGPVAKNISEEEKAGIAEKVGAKPGDAIFF 167

Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE-EKKIDFA----- 455
            AG           AR  I +   + + + + FCW++D P ++  +E E   D A     
Sbjct: 168 AAGSKTSSQELLGAARLEIGRRCELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGA 227

Query: 456 ----HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
               H+ FT P          D  S  A+ YD V NG E+  G IR H  +V  + F+ +
Sbjct: 228 WTAVHHAFTSPTPDCLDTFDTDPGSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVM 287

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI  E  + +FG L  AF+ G PPHGGIA G+DR+VMLL G + +R+V  FP + N  D 
Sbjct: 288 GIGPEEAQEKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDP 347

Query: 572 LMGSPSTVSVEQLRELGLRIVENPKK 597
           L  +P+ ++  Q RE G+     PKK
Sbjct: 348 LTAAPAPITPAQRREAGVDA--KPKK 371


>gi|195579672|ref|XP_002079685.1| GD24088 [Drosophila simulans]
 gi|194191694|gb|EDX05270.1| GD24088 [Drosophila simulans]
          Length = 887

 Score =  214 bits (544), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 122/305 (40%), Positives = 185/305 (60%), Gaps = 13/305 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62
           RTH+CG+L  +D+   V + GW+   R +    F  +RD YG TQV+ +P +   E    
Sbjct: 463 RTHNCGELTSNDINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLSPKTYGMEEYAE 519

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121
             V  E ++ ++G V+ R A TIN  + TG +E+ A K+ +L+ A++ LP  +       
Sbjct: 520 TGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRKFNRAG 579

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
           E +R  +R+LDLR + +  N+  R+ +I  MR  +I    F+E  TP L   +P GA++F
Sbjct: 580 ERLRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 639

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 640 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 697

Query: 241 MSFVEQDDILNTMENVLRGVF-EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           +SF  +DDI+  +E  LR  + ++F    T    F RI Y++A+ +YG DKPD R   ++
Sbjct: 698 LSFTSRDDIMQLIEETLRYSWPKDFPRLQTP---FRRITYEEAMEKYGNDKPDTRFGFLL 754

Query: 300 HNVTE 304
           +NV+E
Sbjct: 755 NNVSE 759



 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 4/110 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 292 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLSDTFLS 347

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
              + V+ I G V+ R    +N    TG++E+S   +++L+  +    P+
Sbjct: 348 TPEQTVIQIVGKVLGRPKANVNLKYDTGEVEVSVTSVKVLNPDDPYDGPI 397



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAKSV 65
            SCG+L     G FV LSG + + R +    F ++RD  G   Q+V   D     +A+ +
Sbjct: 147 QSCGELRNHHCGLFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHP-RVARRM 202

Query: 66  RS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKI 101
            +      L I GLVM R   + N  + TG+IE+  Q I
Sbjct: 203 NNMPENTTLTIVGLVMRRPHNSCNQTMPTGEIEVEVQDI 241


>gi|310795348|gb|EFQ30809.1| tRNA synthetase class II [Glomerella graminicola M1.001]
          Length = 636

 Score =  213 bits (543), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 192/647 (29%), Positives = 284/647 (43%), Gaps = 94/647 (14%)

Query: 15  SDVGSFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           ++ GS + +SG + R R  G  + F  + R+   I Q+ A  ++A   +   +R    + 
Sbjct: 8   TNPGSEIVVSGHIGRTRKVGKNLAFAHLERNGERIGQICAKGENAA--VLAKIRPFSAVL 65

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP---VFGEREY--PESIRFK 127
             G+V   S           + E+  + I+ L+     P P   + G      PE    +
Sbjct: 66  AKGVVTEASG--------AARFEMDMESIQYLN-----PFPKDIIIGPDTVFPPEQRHLQ 112

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            RF     + L + +  R ++ ++M   M+   F++  TPIL  S+ EGAR+F+VP+R  
Sbjct: 113 LRF----HEQLRERLRFRAQLKSTMGQAMVDREFMDVETPILFKSTSEGAREFIVPTRRP 168

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + + YALPQ+PQQYKQ+LMASG   Y+Q A CFRDED R+DR P EF QLDME SF    
Sbjct: 169 RYA-YALPQSPQQYKQVLMASGMGGYYQFARCFRDEDHRADRQP-EFTQLDMEKSFATGV 226

Query: 248 DILNTME-------NVLRGVF--------------------EE--------------FSN 266
            I+  +E       + LR ++                    E+              +  
Sbjct: 227 TIMEDVEYVVGRAWDTLREIYVMEVGKDSFAPVRKASLQNWEQSIQDSAKDDAKAPIYQE 286

Query: 267 GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEV 326
              +S  FLR+ Y D +  YG+DKPDLR P  +  V EH   +   + + + S  P  EV
Sbjct: 287 YPAISTPFLRMKYTDCMDLYGSDKPDLRIPNRICRVDEHLNKNFVSMITDLES--PIVEV 344

Query: 327 WAIPAKGGGGNRA----FCDRMNEWARSQGQ-PGLAYIFWRLDESGNVAG---MGPVAKH 378
           W I        R       D M    +   Q P  A      D S  + G   +GP    
Sbjct: 345 WKISPHEDVDRRDVWKFVIDFMESLPKGLSQNPDGAPTALVFDSSKPLNGFSALGPEGLD 404

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIA--GDPLKFCSFAAD----ARNHIAQELGIIN-CNC 431
             +          ++ +GD   F A    P +  S        A  H A E G+++  + 
Sbjct: 405 SILGALPEDSGFSELNNGDIILFQARKDQPQQGGSTKLGETRIALYHAAVEAGLLDRDDS 464

Query: 432 FEFCWIMDFPFYEWNEE-------EKKIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYD 483
           F+F W+ DFP +   EE              H+PFT P    +  L   D L  KA  YD
Sbjct: 465 FKFLWVTDFPMFTPEEEGDVGQGGASGFSATHHPFTAPHSEEDFELLFKDPLRAKADHYD 524

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG E+  G  R H++E+    F ++    +     F  L +A + G PPH G A G 
Sbjct: 525 LVLNGVELGGGSRRIHIAEIQEFIFRDILKMSQDKIKEFSHLLKALRAGCPPHAGFAIGF 584

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           DR V +L G+ +VR+V  FP + N  D   G P  ++ EQL    L+
Sbjct: 585 DRFVAVLSGSSSVRDVIAFPKNNNGVDEFAGGPGKMTKEQLETYNLQ 631


>gi|119500862|ref|XP_001267188.1| aspartyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
 gi|119415353|gb|EAW25291.1| aspartyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
          Length = 565

 Score =  210 bits (535), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 166/510 (32%), Positives = 259/510 (50%), Gaps = 70/510 (13%)

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDF 180
           ++R+L LR D+  ++ ++ R ++ N  R     CR     F+E  TP+L  S+PEGAR+F
Sbjct: 78  EHRYLQLRSDSELRDALRFRAQVRNICREELEQCR---PPFVEIETPLLFKSTPEGAREF 134

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY----Q 236
           LVP+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF     Q
Sbjct: 135 LVPTR-RRGLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLLAQ 192

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+EMSF   +D++ T+E ++R ++         S  F R+ Y DA+ RYG+DKPD R  
Sbjct: 193 LDLEMSFATGEDVMRTVEGIIRRLWSFLMKDEAPSGPFRRMSYQDAMSRYGSDKPDTRFG 252

Query: 297 IIMHNVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNR--AFCDRMNEWARS--- 350
           + +  + ++ +  +  + +KI  + +P  E +      G  N   A  + +N++  S   
Sbjct: 253 MEIFKI-DYLLPVD--LVNKITPLTDPIIEAFKF---EGNDNDPVATYEFINQFLDSPAG 306

Query: 351 -------QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403
                  +G PG+ +++   D    + G+ P          E I   LD   GD     A
Sbjct: 307 APFNNNPEGGPGV-FVY---DAKKPLCGLQP----FGFEAAERIEELLDPDHGDLIVIQA 358

Query: 404 GDPLKFCSFA---ADARNHI---AQELGIINCNC-FEFCWIMDFPFYEWNEEEKK----- 451
            +   F   +    D R  +   A   G       F+F W++DFP +  + + +      
Sbjct: 359 RERAPFAGGSTPIGDLRRALHTAAVSSGFKPAPTGFDFLWVVDFPLFSPSSDSEPGQGGA 418

Query: 452 --IDFAHNPFTMPQGGMESLK-GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
             I   H+PFT P+   +  +   D     A  YDLV NG E+  G  R H  +  +Q F
Sbjct: 419 AGISSTHHPFTAPKTAADVDQLLTDPTKAVADHYDLVVNGVELGGGSRRIH--DAAVQEF 476

Query: 509 SNVGISKEVVENR------FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               I +++++ R      F  L  A + G PPH G+A G DR+V ++LG ++VR+V  F
Sbjct: 477 ----ILRDILQMRPERLADFSHLLDALRAGCPPHAGLALGFDRLVAVMLGKESVRDVIAF 532

Query: 563 PMS-QNFCDLLMGSPSTVSVEQLRELGLRI 591
           P + +   D ++ +PS ++ E L    LR+
Sbjct: 533 PKTGKGGDDAMVKAPSMMTEEALETYHLRL 562


>gi|320588341|gb|EFX00810.1| aspartyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 684

 Score =  210 bits (535), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 162/526 (30%), Positives = 244/526 (46%), Gaps = 77/526 (14%)

Query: 129 RFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R L +R    L + +  R+ + + +R  +    F E  TP+L  S+PEGAR+F+VP+R  
Sbjct: 158 RHLQMRFSAALQRRLAFRSDVADRLRQLLTGAGFREFETPLLFKSTPEGAREFVVPTR-R 216

Query: 188 QGSFYALPQAPQQYKQLLMASGFD-RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           +G  YALPQ+PQQ+KQ+LMASG    YFQ A CFRDED R+DR P EF QLD+EM+F   
Sbjct: 217 RGWAYALPQSPQQFKQMLMASGVAASYFQFARCFRDEDLRADRQP-EFTQLDLEMAFATG 275

Query: 247 DDILNTMENVLRGVF----------------------------EEFSNGNTV------SN 272
           + ++ T+E ++R ++                            E  ++G+ V        
Sbjct: 276 EHVMQTVEQLVRDLYCHIQQTYVLAPAGIGSADESGLVPTPHSEAPTSGDAVPYATLPDE 335

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS--VNPGYEVWAIP 330
            F RI Y +A+ +YG+DKPDLR P  +H + +HF+    + F+ ++S   +P  E   + 
Sbjct: 336 PFRRISYYEAMAKYGSDKPDLRIPGEIHQI-DHFLP---KTFTSMISDLADPVVEAVRLR 391

Query: 331 AKGGG-GNRAFCDRMNE------WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVN 383
             G    NR F  R+ +           GQP +       D S  ++G+  +        
Sbjct: 392 LDGSPRANRDFVRRLFDSLPPTLGQNPDGQPAVLL----FDASQPLSGLAALGHE----A 443

Query: 384 TEAIRVRL-DMQDGDSCFFIA--GDPLKFCSFAADARNHIAQELGIINC-----NCFEFC 435
              + V L  ++DGD     A   +P    S A       A    +        + F F 
Sbjct: 444 AATLGVELGGLEDGDVVLLQARRREPFSGGSTALGQLRLEAWRAAVAGGLLEPDHRFCFA 503

Query: 436 WIMDFPFYEWNEEEKK---------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLV 485
           W++ FP +  + +                H+PFT P    +  L   D L  +A  YDLV
Sbjct: 504 WVVGFPMFTRDVDTASEPGQGGHAGFSATHHPFTAPLTTADLDLLATDPLRARADHYDLV 563

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
            NG E+  G  R H++ V      +V    +    +F  L  A + G PPH G+A G DR
Sbjct: 564 VNGVELGGGSRRIHVAAVQELVLRHVLQMDDAGVAQFAHLLAALRAGCPPHAGMALGFDR 623

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +V LL G  +VR+V  FP S    DL + SP+ ++  QL    L +
Sbjct: 624 LVALLAGTPSVRDVIAFPKSMKGEDLAVRSPTRLTAAQLETYHLAV 669


>gi|67968455|dbj|BAE00589.1| unnamed protein product [Macaca fascicularis]
          Length = 379

 Score =  210 bits (535), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 125/331 (37%), Positives = 193/331 (58%), Gaps = 16/331 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD +G+ QVV   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFHGLVQVVIPQDESAASVRKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFMKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVDIETPTLFKRTPGGAK 224

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 225 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 282

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  + 
Sbjct: 283 IEMSFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTVTFTEALATYGTDKPDTRFGMK 340

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
           + ++++ F ++E       LS  P   V AI
Sbjct: 341 IIDISDVFRNTEIGFLQDALS-KPHGTVKAI 370


>gi|190407852|gb|EDV11117.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
          Length = 658

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 185/645 (28%), Positives = 283/645 (43%), Gaps = 99/645 (15%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYG-ITQVVANPDS- 56
           + R  T +   L     G  + L+GW+ +     G  +IF  +RD  G I Q+V N    
Sbjct: 30  LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLL 89

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F +   V++  +L +   + +  A+         + E+  + I +L+ + + P  +  
Sbjct: 90  KGFTLEDVVQAVGILSLKRKLSNEDAD---------EYEVQLEDITVLNASNKKPAQM-- 138

Query: 117 EREYPESIRF--KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
            +++  S  +  ++R+L LR       + KR+ I   +R      +F E  TP+L  ++P
Sbjct: 139 -QDFKLSAIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATP 197

Query: 175 EGARDFLVPSRVNQG----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           EGAR+FLVP+R  +     SFYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR 
Sbjct: 198 EGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQ 257

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------------------GNTVS 271
           P EF Q+DMEM+F   +D++  +E  + GV+ +FS                      TVS
Sbjct: 258 P-EFTQVDMEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLDSKGTLVPAKKENGTVS 316

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
               R+ Y+ A+  YG DKPDLR P + + N+       EF  FS +    P +EV  + 
Sbjct: 317 --IFRMTYEQAMTSYGIDKPDLRAPDLKIINL------GEFNAFSHLNKKFPVFEVIIL- 367

Query: 331 AKGGGGNRAFCDRMNE----WARSQGQPGLAY-----IFWRLDESGNVAGMGPVAKHLNI 381
                  R+    M E    W+         Y     +    DE  N             
Sbjct: 368 -------RSAFSNMEEYKERWSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATF 420

Query: 382 VNTEAIRVRLDMQDGD----------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
            N   I   L ++ GD             F    PL           H       +N + 
Sbjct: 421 ENPHLITKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDV 480

Query: 432 FEFCWIMDFPFYE---------------WNEEEK-KIDFAHNPFTMPQ-GGMESLKGNDL 474
               WI+DFP +                + E EK ++   H+PFTM +    E L+    
Sbjct: 481 --ASWIVDFPLFSPVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPE 538

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             +    YDLV NG E+  G  R H   +    F ++ +  +     FG L  AF  G P
Sbjct: 539 KCL-GRHYDLVVNGVELGGGSTRIHDPRLQDYIFEDI-LKIDNAYELFGHLLNAFDMGTP 596

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
           PH G A G DR+  ++   +++R+V  FP S    DL++ SPS +
Sbjct: 597 PHAGFAIGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVI 641


>gi|256052806|ref|XP_002569941.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|227284697|emb|CAY17471.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 412

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/297 (41%), Positives = 176/297 (59%), Gaps = 13/297 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y++H+CG+L    + S V + GW+   R      FL +RD  G+ Q+  + +S   +I +
Sbjct: 41  YKSHACGELSTQHINSTVTVCGWLEHCRLSSR--FLVLRDDRGLIQIYCDKNS--LQIPQ 96

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
              SE VL + G V +R  + +N  + TG+IE+ A+ IEILS +  L           E 
Sbjct: 97  -FNSESVLRVTGKVQARPKKDVNKRMPTGEIEIVAESIEILSHSSPLSFLPKDAANVNEM 155

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSP--EGARDF 180
            R KYR++DLR   + +N+  R+ II  MR  +   N F E  TP L   +P   GAR+F
Sbjct: 156 ERLKYRYIDLRSSNMQRNMRFRSSIILQMRSFLCQNNGFTEIETPYLFKITPGESGAREF 215

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP++   G +Y LPQ+PQQ+KQLLM SGF +Y Q+A CFRDE  RSDR P EF QLD+E
Sbjct: 216 VVPTKF-PGLWYCLPQSPQQFKQLLMISGFSKYMQVARCFRDETSRSDRQP-EFTQLDIE 273

Query: 241 MSFVEQDDILNTMENVLRGVF---EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
           M+F+  DDI   +EN+L  ++   +  S    +S  F+R+ Y DA+ RYG+DKPD+R
Sbjct: 274 MAFITPDDIYEIIENMLLYIWPTVQSTSGCQPISTPFMRMQYCDAMSRYGSDKPDVR 330


>gi|6325153|ref|NP_015221.1| Msd1p [Saccharomyces cerevisiae S288c]
 gi|135101|sp|P15179|SYDM_YEAST RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|172872|gb|AAA35137.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|173036|gb|AAA35173.1| mitochondrial aspartyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|1151223|gb|AAB68196.1| Msd1p: mitochondrial aspartyl-tRNA synthetase [Saccharomyces
           cerevisiae]
 gi|151942693|gb|EDN61039.1| mitochondrial aspartyl-tRNA synthetase [Saccharomyces cerevisiae
           YJM789]
 gi|285815437|tpg|DAA11329.1| TPA: Msd1p [Saccharomyces cerevisiae S288c]
          Length = 658

 Score =  209 bits (531), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 185/645 (28%), Positives = 283/645 (43%), Gaps = 99/645 (15%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYG-ITQVVANPDS- 56
           + R  T +   L     G  + L+GW+ +     G  +IF  +RD  G I Q+V N    
Sbjct: 30  LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLL 89

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F +   V++  +L +   + +  A+         + E+  + I +L+ + + P  +  
Sbjct: 90  KGFTLEDVVQAVGILSLKRKLSNEDAD---------EYEVQLEDITVLNASNKKPAQM-- 138

Query: 117 EREYPESIRF--KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
            +++  S  +  ++R+L LR       + KR+ I   +R      +F E  TP+L  ++P
Sbjct: 139 -QDFKLSAIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNFDFTEVETPMLFKATP 197

Query: 175 EGARDFLVPSRVNQG----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           EGAR+FLVP+R  +     SFYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR 
Sbjct: 198 EGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQ 257

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------------------GNTVS 271
           P EF Q+DMEM+F   +D++  +E  + GV+ +FS                      TVS
Sbjct: 258 P-EFTQVDMEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLDSKGTLVPAKKENGTVS 316

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
               R+ Y+ A+  YG DKPDLR P + + N+       EF  FS +    P +EV  + 
Sbjct: 317 --IFRMTYEQAMTSYGIDKPDLRAPDLKIINL------GEFNAFSHLNKKFPVFEVIIL- 367

Query: 331 AKGGGGNRAFCDRMNE----WARSQGQPGLAY-----IFWRLDESGNVAGMGPVAKHLNI 381
                  R+    M E    W+         Y     +    DE  N             
Sbjct: 368 -------RSAFSNMEEYKERWSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATF 420

Query: 382 VNTEAIRVRLDMQDGD----------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
            N   I   L ++ GD             F    PL           H       +N + 
Sbjct: 421 ENPHLITKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDV 480

Query: 432 FEFCWIMDFPFYE---------------WNEEEK-KIDFAHNPFTMPQ-GGMESLKGNDL 474
               WI+DFP +                + E EK ++   H+PFTM +    E L+    
Sbjct: 481 --ASWIVDFPLFSPVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPE 538

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             +    YDLV NG E+  G  R H   +    F ++ +  +     FG L  AF  G P
Sbjct: 539 KCL-GRHYDLVVNGVELGGGSTRIHDPRLQDYIFEDI-LKIDNAYELFGHLLNAFDMGTP 596

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
           PH G A G DR+  ++   +++R+V  FP S    DL++ SPS +
Sbjct: 597 PHAGFAIGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVI 641


>gi|323331212|gb|EGA72630.1| Msd1p [Saccharomyces cerevisiae AWRI796]
          Length = 662

 Score =  209 bits (531), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 188/660 (28%), Positives = 289/660 (43%), Gaps = 92/660 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYG-ITQVVANPDS- 56
           + R  T +   L     G  + L+GW+ +     G  +IF  +RD  G I Q+V N    
Sbjct: 30  LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLL 89

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F +   V++  +L +   + +  A+         + E+  + I +L+ + + P  +  
Sbjct: 90  KGFTLEDVVQAVGILSLKRKLSNEDAD---------EYEVQLEDITVLNASNKKPAQM-- 138

Query: 117 EREYPESIRF--KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
            +++  S  +  ++R+L LR       + KR+ I   +R      +F E  TP+L  ++P
Sbjct: 139 -QDFKLSAIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNFDFTEVETPMLFKATP 197

Query: 175 EGARDFLVPSRVNQG----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           EGAR+FLVP+R  +     SFYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR 
Sbjct: 198 EGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQ 257

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------------------GNTVS 271
           P EF Q+DMEM+F   +D++  +E  + GV+ +FS                      TVS
Sbjct: 258 P-EFTQVDMEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLDSKGTLVPAKKENGTVS 316

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
               R+ Y+ A+  YG DKPDLR P + + N+       EF  FS +    P +EV  I 
Sbjct: 317 --IFRMTYEQAMTSYGIDKPDLRAPDLKIINL------GEFNAFSHLNKKFPVFEV-IIL 367

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAY-----IFWRLDESGNVAGMGPVAKHLNIVNTE 385
                    + +R   W+         Y     +    DE  N              N  
Sbjct: 368 RNAFSNMEEYKER---WSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPH 424

Query: 386 AIRVRLDMQDGD----------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435
            I   L ++ GD             F    PL           H       +N +     
Sbjct: 425 LITKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDV--AS 482

Query: 436 WIMDFPFYE---------------WNEEEK-KIDFAHNPFTMPQ-GGMESLKGNDLLSIK 478
           WI+DFP +                + E EK ++   H+PFTM +    E L+      + 
Sbjct: 483 WIVDFPLFSPVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCL- 541

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YDLV NG E+  G  R H   +    F ++ +  +     FG L  AF  G PPH G
Sbjct: 542 GRHYDLVVNGVELGGGSTRIHDPRLQDYIFEDI-LKIDNAYELFGHLLNAFDMGTPPHAG 600

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
            A G DR+  ++   +++R+V  FP S    DL++ SPS +    L    ++   N KK+
Sbjct: 601 FAIGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVIPESILEPYNIK-YSNSKKM 659


>gi|256274257|gb|EEU09165.1| Msd1p [Saccharomyces cerevisiae JAY291]
          Length = 658

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 184/641 (28%), Positives = 282/641 (43%), Gaps = 91/641 (14%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYG-ITQVVANPDS- 56
           + R  T +   L     G  + L+GW+ +     G  +IF  +RD  G I Q+V N    
Sbjct: 30  LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLL 89

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F +   V++  +L +   + +  A+         + E+  + I +L+ + + P  +  
Sbjct: 90  KGFTLEDVVQTVGILSLKRKLSNEDAD---------EYEVQLEDITVLNASNKKPAQM-- 138

Query: 117 EREYPESIRF--KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
            +++  S  +  ++R+L LR       + KR+ I   +R      +F E  TP+L  ++P
Sbjct: 139 -QDFKLSAIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATP 197

Query: 175 EGARDFLVPSRVNQG----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           EGAR+FLVP+R  +     SFYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR 
Sbjct: 198 EGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQ 257

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------------------GNTVS 271
           P EF Q+DMEM+F   +D++  +E  + GV+ +FS                      TVS
Sbjct: 258 P-EFTQVDMEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLDSKGTLVPAKKENGTVS 316

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
               R+ Y+ A+  YG DKPDLR P + + N+       EF  FS +    P +EV  I 
Sbjct: 317 --IFRMTYEQAMTSYGIDKPDLRAPDLKIINL------GEFNAFSHLNKKFPVFEV-IIL 367

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAY-----IFWRLDESGNVAGMGPVAKHLNIVNTE 385
                    + +R   W+         Y     +    DE  N              N  
Sbjct: 368 RNAFSNMEEYKER---WSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPH 424

Query: 386 AIRVRLDMQDGD----------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435
            I   L ++ GD             F    PL           H       +N +     
Sbjct: 425 LITKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDV--AS 482

Query: 436 WIMDFPFYE---------------WNEEEK-KIDFAHNPFTMPQ-GGMESLKGNDLLSIK 478
           WI+DFP +                + E EK ++   H+PFTM +    E L+      + 
Sbjct: 483 WIVDFPLFSPVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCLG 542

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YDLV NG E+  G  R H   +    F ++ +  +     FG L  AF  G PPH G
Sbjct: 543 Q-HYDLVVNGVELGGGSTRIHDPRLQDYIFEDI-LKIDNAYELFGHLLNAFDMGTPPHAG 600

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
            A G DR+  ++   +++R+V  FP S    DL++ SPS +
Sbjct: 601 FAIGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVI 641


>gi|170086982|ref|XP_001874714.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649914|gb|EDR14155.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 646

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 185/324 (57%), Gaps = 27/324 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62
           RTH+CG L   D GS V L+GW+   R    I F  I+D +G TQ++ N   + A   I 
Sbjct: 35  RTHNCGSLTARDAGSRVVLAGWILPERKGKAISFFPIKDSHGTTQLIVNHADNPASSSII 94

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP- 121
             +  E  + I+G V+ R +    ++  TG+I++   K+ +L+ A  LP         P 
Sbjct: 95  SEIPVESTVLIEGTVLLRPSNARRSDP-TGEIDVQVDKVTLLNPATNLPFLPSNPHNLPN 153

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R ++R+LDLRR  L +NI KR+++ + +R  +    F E  TP+L  SSPEGAR+FL
Sbjct: 154 EDLRSRHRYLDLRRTALSENIKKRSQVAHLVRNILHTIGFTEVETPVLLRSSPEGAREFL 213

Query: 182 VPSRVNQGS-------FYALPQAPQQYKQLLMAS-GFDRYFQIAPCFRDEDPRSDRLPGE 233
           VP+R+N  S       FYAL Q+PQQ KQLL+ S G D+YFQIA CFRDED R DR P E
Sbjct: 214 VPTRINTASPTSQEPLFYALQQSPQQPKQLLICSGGVDKYFQIAKCFRDEDGRKDRQP-E 272

Query: 234 FYQLDMEMSFVEQD-------------DILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
           F Q+D+EM+FV                ++ + +E +LR ++++F N   +      + Y 
Sbjct: 273 FTQIDLEMAFVSWSGDEKGTSWKIGGGEVRDVIETLLREIWQQFEN-VALPPRLRVMTYH 331

Query: 281 DAIRRYGTDKPDLRNPIIMHNVTE 304
           DA+  +G+DKPD R  + + ++T+
Sbjct: 332 DAMTHFGSDKPDTRFGLEITDLTD 355



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 89/164 (54%), Gaps = 7/164 (4%)

Query: 434 FCWIMDFPFYEWNEEEK------KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVC 486
           F WI +FP +  ++ +K      +   +H+PFT P    + +L   D+ +++   YDLV 
Sbjct: 478 FLWITEFPLFTRDDSDKDFLAKGRWSSSHHPFTAPMWEDIPTLYRGDIETVRGQHYDLVL 537

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           NG EI  G +R H   +    F+NV    E  +  F  L RA  CG PPHGGIA G DRI
Sbjct: 538 NGVEIGGGSVRIHDPLMQDHIFTNVLQLSENEKTPFNHLVRALHCGAPPHGGIALGFDRI 597

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           + +L   +++R+V  FP +    DLL  SP+ V+ + L E G++
Sbjct: 598 MTMLCNTQSIRDVIAFPKTSLGTDLLFKSPAPVTSQVLYEYGIQ 641


>gi|46120751|ref|XP_385110.1| hypothetical protein FG04934.1 [Gibberella zeae PH-1]
          Length = 813

 Score =  207 bits (527), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 174/546 (31%), Positives = 252/546 (46%), Gaps = 77/546 (14%)

Query: 112 LPVFGEREYPESIR-FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           L V  E ++P   R ++ RF       L + +  R+ +   +   +  + F +  TP L 
Sbjct: 280 LIVTPEVQFPPKKRHYQIRF----HQELQERLKFRSWLKGELTKGLQEKGFTDIETPTLF 335

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            S+PEGAR+FLVP+R  +G  YAL Q+PQQYKQ LMASG  RY Q A CFRDED R+DR 
Sbjct: 336 KSTPEGAREFLVPTR-QRGKAYALNQSPQQYKQTLMASGISRYMQWARCFRDEDSRADRQ 394

Query: 231 PGEFYQLDMEMSF-----VEQDD---ILNTMENV--------LRG----VFEEFSNGN-- 268
           P EF QLDME SF     V QD    IL+ +E +        +RG    V  E   G   
Sbjct: 395 P-EFTQLDMEWSFAGASKVRQDVNDIILSALEALRPVHSYQEIRGERIPVLSEIPQGTRP 453

Query: 269 ---TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
               V++ F  + + D I  YG+DKPDLR P  +H + +   + +F      L  +P  E
Sbjct: 454 ADEPVAHTFTTLKFQDCISSYGSDKPDLRIPNKIHALPDLEPYKQFVSMITHLD-DPLIE 512

Query: 326 VWAIPAKGGGGNRA------FCDRMNE--WARSQGQPGLAYIFWRLDESGNVAGMGPVAK 377
            +  P      N A      F D +         G+P +       D    + G   +  
Sbjct: 513 AFTFPLSTEDPNEARKLVTKFMDNLPSSLADNPDGKPQILVC----DRKAPLQGFSSLGF 568

Query: 378 H----LNIVNTEAIRVRLDMQDGDSCFFIAGDPLK--FCSFAA---DARNHIAQ---ELG 425
                +++V  E +      + GD   F A +  K  +CS +    D RN + +   E G
Sbjct: 569 EFQDVIDLVAGEGV------EQGDLVIFQAREKPKGQYCSGSTKIGDIRNALWKFLVEEG 622

Query: 426 II------NCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKG 471
            +      +    +F W+ DFP ++  E+ +        I  +H+PFT P    +  L  
Sbjct: 623 QMEKPRLGDPGSLQFVWVTDFPMFKPTEKGEPGQEGAAGIAASHHPFTAPLSKTDLELLF 682

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D L  K+  YDLV NG E+  G  R H++ V     S+V    +     F  L+ A + 
Sbjct: 683 TDPLQAKSAAYDLVLNGVEVGGGSERIHIATVQKFIMSDVLQMTDKRIADFAHLFEALES 742

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPH G A G DR+V LL     VR+V  FP +    D  + SPS ++ EQL   GL++
Sbjct: 743 GCPPHAGFALGFDRLVALLTDTATVRDVIAFPKTMKGEDPFVKSPSRLTDEQLEPYGLQL 802

Query: 592 VENPKK 597
             + +K
Sbjct: 803 RRSDQK 808


>gi|301631421|ref|XP_002944796.1| PREDICTED: aspartyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 415

 Score =  206 bits (524), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 131/369 (35%), Positives = 194/369 (52%), Gaps = 10/369 (2%)

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           +F Q+D E SF+ +++I    + ++  VF++    +     F  + Y DA  R+G+DKPD
Sbjct: 48  QFTQIDCETSFLNEEEIRAIFQRMITEVFQQQLGVDL--GEFPIMTYQDAAHRFGSDKPD 105

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ 351
           LR  +    +TE     +F+VFS   +   G  V A+   GGG  +R   D+  E+ +  
Sbjct: 106 LRVKLEFTELTEVMKDVDFKVFSAPATTQGG-RVVALRVPGGGAISRGEIDQYTEFVKIY 164

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLA+I       G      P+ K+L+     AI  R   QDGD  FF A D  K  +
Sbjct: 165 GAKGLAWIKVNQAAKGRDGLQSPIVKNLHDAAIAAILQRTGAQDGDLLFFGA-DKEKIVN 223

Query: 412 FAADA-RNHIAQ-ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
            A  A R  I   E G  N    N +   W++DFP +E + EE +    H+PFT P+ G 
Sbjct: 224 DAIGALRLKIGHSEFGKQNGLFENRWAPLWVVDFPMFEHDAEEDRWVAVHHPFTSPKDGH 283

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
           E L   D     A  YD+V NG+E+  G +R H ++V  + F+ + I  +    +FG L 
Sbjct: 284 EDLMDTDPAKCIAKAYDMVLNGWELGGGSVRIHRADVQAKVFAALNIGPQDQRAKFGYLL 343

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            A Q G PPHGG+A G+DR++ L+ GA+++R+V  FP +Q   DLL  +PS V  +QLRE
Sbjct: 344 DALQYGAPPHGGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRE 403

Query: 587 LGLRIVENP 595
           L +R+  NP
Sbjct: 404 LHIRLRNNP 412



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 30/45 (66%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ 49
          R+H CG +  + +G  + L GWV+R R HGG+IF+D+RD  G  Q
Sbjct: 4  RSHYCGLVTEALMGQTLSLCGWVNRRRDHGGVIFIDLRDREGYVQ 48


>gi|259150054|emb|CAY86857.1| Msd1p [Saccharomyces cerevisiae EC1118]
          Length = 658

 Score =  206 bits (523), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 183/641 (28%), Positives = 281/641 (43%), Gaps = 91/641 (14%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYG-ITQVVANPDS- 56
           + R  T +   L     G  + L+GW+ +     G  +IF  +RD  G I Q+V N    
Sbjct: 30  LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLL 89

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F +   V++  +L +   + +  A+         + E+  + I +L+ + + P  +  
Sbjct: 90  KGFTLEDVVQAVGILSLKRKLSNEDAD---------EYEVQLEDITVLNASNKKPAQM-- 138

Query: 117 EREYPESIRF--KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
            +++  S  +  ++R+L LR       + KR+ I   +R      +F E  TP+L  ++P
Sbjct: 139 -QDFKLSAIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATP 197

Query: 175 EGARDFLVPSRVNQG----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           EGAR+FLVP+R  +     SFYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR 
Sbjct: 198 EGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQ 257

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------------------GNTVS 271
           P EF Q+DMEM+F   +D++  +E  +  V+ +FS                      TVS
Sbjct: 258 P-EFTQVDMEMAFANSEDVMKIIEKTVSEVWSKFSKKRGLLTLDSKGTLVPAKKENGTVS 316

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
               R+ Y+ A+  YG DKPDLR P + + N+       EF  FS +    P +EV  I 
Sbjct: 317 --IFRMTYEQAMTSYGIDKPDLRAPDLKIINL------GEFNAFSHLNKKFPVFEV-IIL 367

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAY-----IFWRLDESGNVAGMGPVAKHLNIVNTE 385
                    + +R   W+         Y     +    DE  N              N  
Sbjct: 368 RNAFSNMEEYKER---WSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPH 424

Query: 386 AIRVRLDMQDGD----------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435
            I   L ++ GD             F    PL           H       +N +     
Sbjct: 425 LITKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDV--AS 482

Query: 436 WIMDFPFYE---------------WNEEEK-KIDFAHNPFTMPQ-GGMESLKGNDLLSIK 478
           WI+DFP +                + E EK ++   H+PFTM +    E L+      + 
Sbjct: 483 WIVDFPLFSPVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCL- 541

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YDLV NG E+  G  R H   +    F ++ +  +     FG L  AF  G PPH G
Sbjct: 542 GRHYDLVVNGVELGGGSTRIHDPRLQDYIFEDI-LKIDNAYELFGHLLNAFDMGTPPHAG 600

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
            A G DR+  ++   +++R+V  FP S    DL++ SPS +
Sbjct: 601 FAIGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVI 641


>gi|323302733|gb|EGA56539.1| Msd1p [Saccharomyces cerevisiae FostersB]
          Length = 658

 Score =  205 bits (522), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 184/641 (28%), Positives = 280/641 (43%), Gaps = 91/641 (14%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYG-ITQVVANPDS- 56
           + R  T +   L     G  + L+GW+ +     G  +IF  +RD  G I Q+V N    
Sbjct: 30  LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLL 89

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F +   V++  +L +   + +  A+         + EL  + I +L+ + + P  +  
Sbjct: 90  KGFTLEDVVQAVGILSLKRKLSNEDAD---------EYELQLEDITVLNASNKKPAQM-- 138

Query: 117 EREYPESIRF--KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
            +++  S  +  ++R+L LR       + KR+ I   +R      +F E  TP+L  ++P
Sbjct: 139 -QDFKLSAIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATP 197

Query: 175 EGARDFLVPSRVNQG----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           EGAR+FLVP+R  +     SFYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR 
Sbjct: 198 EGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQ 257

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------------------GNTVS 271
           P EF Q+DMEM+F   +D++  +E  +  V+ +FS                      TVS
Sbjct: 258 P-EFTQVDMEMAFANSEDVMKIIEKTVSEVWSKFSKKRGLLTLDSKGTLVPAKKENGTVS 316

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
               R+ Y+ A+  YG DKPDLR P + + N+       EF  FS +    P  EV  I 
Sbjct: 317 --IFRMTYEQAMTSYGIDKPDLRAPDLKIINL------GEFNAFSHLNKKFPVXEV-IIL 367

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAY-----IFWRLDESGNVAGMGPVAKHLNIVNTE 385
                    + +R   W+         Y     +    DE  N              N  
Sbjct: 368 RNAFSNMEEYKER---WSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPH 424

Query: 386 AIRVRLDMQDGD----------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435
            I   L ++ GD             F    PL           H       +N +     
Sbjct: 425 LITKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDV--AS 482

Query: 436 WIMDFPFYE---------------WNEEEK-KIDFAHNPFTMPQ-GGMESLKGNDLLSIK 478
           WI+DFP +                + E EK ++   H+PFTM +    E L+      + 
Sbjct: 483 WIVDFPLFSPVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCLG 542

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YDLV NG E+  G  R H   +    F ++ +  +     FG L  AF  G PPH G
Sbjct: 543 Q-HYDLVVNGVELGGGSTRIHDPRLQDYIFEDI-LKIDNAYELFGHLLNAFDMGTPPHAG 600

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
            A G DR+  ++   +++R+V  FP S    DL++ SPS +
Sbjct: 601 FAIGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVI 641


>gi|163785825|ref|ZP_02180304.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159878906|gb|EDP72931.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 351

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/355 (34%), Positives = 192/355 (54%), Gaps = 20/355 (5%)

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           ++D++   E ++  + +  ++ N   N F R+ Y +AI +YG+DKPD+R  + + ++++ 
Sbjct: 1   EEDVMAVSEGLIHTLLK--TSWNRFKNTFKRMTYQEAIEKYGSDKPDIRFEMHLKDISDI 58

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLD 364
               EF+VF    ++  G  V  +  +GG   +R   D + E+A+  G  G+A+I  ++ 
Sbjct: 59  AKEVEFKVFKD--TIEKGGIVKGLTIEGGASFSRKEIDDLTEYAKKFGAKGMAWI--KIT 114

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G      P+ K       + I+ +++ + GD   FIA             R HIA +L
Sbjct: 115 EEGF---QSPITKFFTEDQLQKIKEKMNAKAGDLMVFIADVHETTHRVLGFMRKHIADKL 171

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND--------LLS 476
            I+    ++F WI+DFP  EW+EEE +    H+PFT P+   E L   D          S
Sbjct: 172 NIVPTGRWDFLWIVDFPLLEWDEEEGRYVALHHPFTSPK--EEDLPKLDKALENPEVATS 229

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I+A  YDLV NG EI  G IR H  ++  + F+ +GISKE  E +FG L +A + G PPH
Sbjct: 230 IRARAYDLVLNGEEIGGGSIRIHRPDIQEKLFNILGISKEEAEEKFGFLIQALKYGAPPH 289

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GG+A G+DR+V L+  ++++REV  FP +Q     L  +P  VS EQL ELG+ +
Sbjct: 290 GGLAFGLDRLVALMTDSESIREVIAFPKTQKGSCPLTDAPDYVSKEQLEELGIEV 344


>gi|312074259|ref|XP_003139890.1| DRS-2 protein [Loa loa]
 gi|307764949|gb|EFO24183.1| DRS-2 protein [Loa loa]
          Length = 407

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 178/306 (58%), Gaps = 11/306 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAK 63
           RTH+CG+L V      V L GW+   R +    FL +RD YG  Q  +        E  +
Sbjct: 29  RTHTCGELRVGHENQEVTLYGWLQFSRLNR---FLVLRDAYGCVQARIPEERKDLVEKIR 85

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
            V  E VL I+G+V+ R  +  NA++ TG IE+    +E+L+ +    PL    E    E
Sbjct: 86  IVNCESVLKIEGVVVDRGEQYRNADMRTGDIEVLVNNLELLNTSPANYPL---DEVTSTE 142

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFL 181
             +F+YRFLDLR   + + +  R  +++ MR  ++ + NFIE  TP L   +P G+ +F+
Sbjct: 143 ETKFRYRFLDLRTKRMQRALRLRANVVHGMRKYLVEKANFIEVETPTLFRRTPGGSHEFI 202

Query: 182 VPS-RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           VP+ + N G FY+LPQ+PQQ+KQLLM  G DRYFQIA C+RDE  +SDR P EF Q+D+E
Sbjct: 203 VPAPKPNLGKFYSLPQSPQQFKQLLMCGGIDRYFQIARCYRDEGAKSDRQP-EFTQVDVE 261

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF +QD+++  +E+++   + +  +    S  F RI Y  A R +GTDKPDLR P  + 
Sbjct: 262 LSFTDQDNVMKLIESIIVESWPKELDDLKPSAPFKRIKYLKAERLFGTDKPDLRIPWTIE 321

Query: 301 NVTEHF 306
           + T   
Sbjct: 322 DCTSEL 327


>gi|45201302|ref|NP_986872.1| AGR206Cp [Ashbya gossypii ATCC 10895]
 gi|44986156|gb|AAS54696.1| AGR206Cp [Ashbya gossypii ATCC 10895]
          Length = 651

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 197/643 (30%), Positives = 287/643 (44%), Gaps = 82/643 (12%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHG---GIIFLDIRDHYG-ITQVVANPDSACFEIAK 63
           S  D+  S  G    ++GW+ R +P     G++F  +RD  G   Q+V   DS    + K
Sbjct: 37  SIEDVLSSTAGQPAIINGWIDR-KPRKVGKGLVFGSLRDINGDKIQLV---DSQA--LLK 90

Query: 64  SVRSEWVLCIDG-LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
               E  + I+G LV  R  E    +  T + E+    +  L+        +  E +  E
Sbjct: 91  QSHVEDAVQIEGKLVQKRLKE----DEKTPEYEIQLTSLRTLNGCNPKAAQM-QECKMSE 145

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S   +YR L LR       +  R     ++R  +    F+E  TP+L  S+PEGAR+FLV
Sbjct: 146 SYPPEYRHLQLRLPAFQARMKMRHNASKTVRASLEKLGFMEVETPLLFKSTPEGAREFLV 205

Query: 183 PSRVNQGS---FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           P+R  QG    FYALPQ+PQQYKQLLMA G  +Y+Q+A CFRDED RSDR P EF Q+D+
Sbjct: 206 PTRHKQGKDPLFYALPQSPQQYKQLLMAGGVSKYYQLARCFRDEDLRSDRQP-EFTQVDL 264

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTV--------------SNNFLRICYDDAIRR 285
           EM+F   DD++  +E+ +   + E +    +                   R+ Y   + +
Sbjct: 265 EMAFANGDDVMRVVESTVLNTWNEVALSGKLHTLDKALNIVPCGPDTPVSRLTYHQVMTQ 324

Query: 286 YGTDKPDLRNPIIM------HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
           YG DKPDLR   +        NV  H +H +F VF  ++  N     +  P         
Sbjct: 325 YGIDKPDLRFKDLKIVDLSEFNVHGH-MHKQFPVFEILILRN----AFDTPEDFKKHWTH 379

Query: 340 FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD-- 397
             D  NE+  +  +P +  I     ES       P+A   N  N + +    D++ GD  
Sbjct: 380 LSD-PNEY--NYRKPIVVPITDTKLESNWFESFLPIA---NFENPKLVAKFFDLKQGDIV 433

Query: 398 --------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNE-- 447
                   +  F    PL         R+   +EL   + +     W++DFP +   E  
Sbjct: 434 CGATRQRTNELFENPTPLGRLRQLV-IRSPRGKEL-YQSTDRDVASWVVDFPLFSPEEAS 491

Query: 448 --EEKKIDFA----------HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
             E +K ++           H+PFTM +           LS     YD V NG E+  G 
Sbjct: 492 GTETRKSEYPAYDASRLCSMHHPFTMVRLQDYQKLSEKPLSCLGQHYDFVVNGVELGGGS 551

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENR-FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            R H  + +LQ +    I K   E++ FG L  AF  G PPH G A G DR+V ++   +
Sbjct: 552 TRVH--DPVLQRYIFNQILKINNEDQVFGHLLEAFSMGTPPHAGFAIGFDRMVAMMCAKE 609

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           ++R+V  FP S    DLL+ SPS V    L   G  I   P+K
Sbjct: 610 SIRDVIAFPKSVTGSDLLVRSPSVVPETTL--AGYNIAPVPEK 650


>gi|330936725|gb|EGH40910.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 211

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 102/209 (48%), Positives = 140/209 (66%), Gaps = 1/209 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDR 212
           SR + GSF+ALPQ+PQ +KQLLM +GFDR
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDR 211


>gi|323335037|gb|EGA76327.1| Msd1p [Saccharomyces cerevisiae Vin13]
          Length = 658

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 182/639 (28%), Positives = 281/639 (43%), Gaps = 87/639 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYG-ITQVVANPDS- 56
           + R  T +   L     G  + L+GW+ +     G  +IF  +RD  G I Q+V N    
Sbjct: 30  LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLL 89

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F +   V++  +L +   + +  A+         + E+  + I +L+ + + P  +  
Sbjct: 90  KGFTLEDVVQAVGILSLKRKLSNEDAD---------EYEVQLEDITVLNASNKKPAQM-- 138

Query: 117 EREYPESIRF--KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
            +++  S  +  ++R+L LR       + KR+ I   +R      +F E  TP+L  ++P
Sbjct: 139 -QDFKLSAIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATP 197

Query: 175 EGARDFLVPSRVNQG----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           EGAR+FLVP+R  +     SFYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR 
Sbjct: 198 EGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQ 257

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVL----------RGVFEEFSNGNTV-------SNN 273
           P EF Q+DMEM+F   +D++  +E  +          RG+    S G  V       + +
Sbjct: 258 P-EFTQVDMEMAFANSEDVMKIIEKTVSXXWSKFSKKRGLLTLDSKGTLVPAKKENGTVS 316

Query: 274 FLRICYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
             R+ Y+ A+  YG DKPDLR P + + N+       EF  FS +    P +EV  I   
Sbjct: 317 IFRMTYEQAMTSYGIDKPDLRAPDLKIINL------GEFNAFSHLNKKFPVFEV-IILRN 369

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAY-----IFWRLDESGNVAGMGPVAKHLNIVNTEAI 387
                  + +R   W+         Y     +    DE  N              N   I
Sbjct: 370 AFSNMEEYKER---WSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPHLI 426

Query: 388 RVRLDMQDGD----------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
              L ++ GD             F    PL           H       +N +     WI
Sbjct: 427 TKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDV--ASWI 484

Query: 438 MDFPFYE---------------WNEEEK-KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAF 480
           +DFP +                + E EK ++   H+PFTM +    E L+      +   
Sbjct: 485 VDFPLFSPVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCL-GX 543

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G  R H   +    F ++ +  +     FG L  AF  G PPH G A
Sbjct: 544 HYDLVVNGVELGGGSTRIHDPRLQDYIFEDI-LKIDNAYELFGHLLNAFDMGTPPHAGFA 602

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
            G DR+  ++   +++R+V  FP S    DL++ SPS +
Sbjct: 603 IGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVI 641


>gi|302928295|ref|XP_003054676.1| hypothetical protein NECHADRAFT_31440 [Nectria haematococca mpVI
           77-13-4]
 gi|256735617|gb|EEU48963.1| hypothetical protein NECHADRAFT_31440 [Nectria haematococca mpVI
           77-13-4]
          Length = 709

 Score =  202 bits (514), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 163/501 (32%), Positives = 235/501 (46%), Gaps = 77/501 (15%)

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           ++ + FI+  TP L  S+PEGAR+FLVP+R  +G  YAL Q+PQQYKQ+LMASG  +Y Q
Sbjct: 215 LLNKGFIDVETPTLFKSTPEGAREFLVPTR-RRGMAYALNQSPQQYKQILMASGIGQYMQ 273

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSF-----VEQD--DILNTMENVLR---------- 258
            A C+RDED R+DR P EF QLDME SF     V QD  DI+      LR          
Sbjct: 274 WARCYRDEDSRADRQP-EFTQLDMEWSFAGAAKVRQDVNDIVLEALEALRPAHSYKEIRN 332

Query: 259 ---GVFEEFSNG-----NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
               +  E  +G       +++ F  I + D+I  YGTDKPDLR P  +H + +   + +
Sbjct: 333 QRVPILTEIPDGPQPTDEPLAHEFTTIKFQDSIASYGTDKPDLRIPNKVHAIPDLEPYRQ 392

Query: 311 FRVFSKILSV-NPGYEVWAIPAKGGGGNRA------FCDRMNEWARSQ--GQPG-LAYIF 360
           F   S I  + +P  E +  P +      A      F D +     +   GQP  L Y  
Sbjct: 393 F--VSMITDIEDPLVEAFTFPLENVSPQEAREFVIKFMDDLPTGLANNPDGQPSVLVY-- 448

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA-----GDPLKFCSFAAD 415
              D S  + G+  V      +  + +    ++ DGD   F A     G   K  +   +
Sbjct: 449 ---DSSKPLMGLSSVGFEFEAI-LDLVSEGKELNDGDLVVFQAREKHQGQYCKGSTKIGE 504

Query: 416 ARNHIAQEL---------GIINCNCFEFCWIMDFPFYE-------------WNEEEKKID 453
            R+ + + L          +      +F W+ +FP ++               E    I 
Sbjct: 505 LRSALWKALVEAEYMSTPKLGTPGSLQFVWVTEFPMFKPVEEGEPGQEGEPGQEGSAGIA 564

Query: 454 FAHNPFTMP--QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
            +H+PFT P  Q  +E L  N  L  K+  YDLV NG E+  G  R H++EV      ++
Sbjct: 565 ASHHPFTAPLSQADLELLFTNP-LDAKSAAYDLVLNGVEVGGGSERIHVAEVQKFIMKDI 623

Query: 512 -GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             + K+ + + F  L+ A Q G PPH G A G DR+V L+     VR+   FP +    D
Sbjct: 624 LKVPKKRIAD-FAHLFEALQSGCPPHAGFALGFDRLVALMTDTATVRDAMAFPKTMKGED 682

Query: 571 LLMGSPSTVSVEQLRELGLRI 591
            L+ SPS ++ EQL   GL +
Sbjct: 683 PLVKSPSKLTKEQLEPYGLYL 703


>gi|159125095|gb|EDP50212.1| aspartyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
          Length = 680

 Score =  201 bits (512), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 158/505 (31%), Positives = 235/505 (46%), Gaps = 64/505 (12%)

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDF 180
           ++R+L LR D+  ++ ++ R ++ N  R     CR     F+E  TP+L  S+PEGAR+F
Sbjct: 197 EHRYLQLRSDSELRDALRFRAQVRNICREELEQCR---PPFVEIETPLLFKSTPEGAREF 253

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+E
Sbjct: 254 LVPTR-RRGLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLE 311

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR---------RYGTD-- 289
           MSF   +D++ T+E ++R ++         S  F R+ Y DA+          RYG +  
Sbjct: 312 MSFATGEDVMRTVEGIIRRLWSSLMKDEAPSGPFRRMAYQDAMSRYGSDKPDTRYGMEIF 371

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCD 342
           K D   P+ + N            F    + N     +         PA     N     
Sbjct: 372 KIDYLLPVDLVNKITPLTDPIIEAFKFEGNDNDPVATYEFIKQFLDSPAGAPFNNNP--- 428

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
                   +G PG+ +++   D    + G+ P          E I   LD   GD     
Sbjct: 429 --------EGGPGV-FVY---DAKKPLCGLQP----FGFEAAERIEELLDPDHGDLIVIQ 472

Query: 403 AGDPLKFCSFAAD------ARNHIAQELGIINCNC-FEFCWIMDFPFYEWNEEEKK---- 451
           A +   F   +        A +  A   G       F+F W++DFP +  + + +     
Sbjct: 473 ARERAPFTGGSTPIGDLRRALHTAAVSSGFKPAPTGFDFLWVVDFPLFSPSSDSEPGQGG 532

Query: 452 ---IDFAHNPFTMPQGGMESLKG-NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
              I   H+PFT P+   +  +   D     A  YDLV NG E+  G  R H + V    
Sbjct: 533 AAGISSTHHPFTAPKTAADVDQLLTDPTKAVADHYDLVVNGVELGGGSRRIHDAAVQEFI 592

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS-Q 566
             ++   K      F  L  A + G PPH G+A G DR+V ++LG ++VR+V  FP + +
Sbjct: 593 LRDILQMKPERLADFSHLLDALRAGCPPHAGLALGFDRLVAVMLGKESVRDVIAFPKTGK 652

Query: 567 NFCDLLMGSPSTVSVEQLRELGLRI 591
              D ++ +PS ++ E L    LR+
Sbjct: 653 GGDDAMVKAPSMMTKEALETYHLRL 677


>gi|323306992|gb|EGA60276.1| Msd1p [Saccharomyces cerevisiae FostersO]
          Length = 640

 Score =  201 bits (511), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 183/643 (28%), Positives = 275/643 (42%), Gaps = 95/643 (14%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYG-ITQVVANPDS- 56
           + R  T +   L     G  + L+GW+ +     G  +IF  +RD  G I Q+V N    
Sbjct: 8   LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLL 67

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-- 114
             F +   V++  +L +   + +  A+         + E   + I +L+ + + P  +  
Sbjct: 68  KGFTLEDVVQAVGILSLKRKLSNEDAD---------EYEXQLEDITVLNASNKKPAQMQD 118

Query: 115 --FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                   PE     +R+L LR       + KR+ I   +R      +F E  TP+L  +
Sbjct: 119 FKLSAIXPPE-----FRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKA 173

Query: 173 SPEGARDFLVPSRVNQG----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           +PEGAR+FLVP+R  +     SFYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+D
Sbjct: 174 TPEGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRAD 233

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------------------GNT 269
           R P EF Q+DMEM+F   +D++  +E  +  V+ +FS                      T
Sbjct: 234 RQP-EFTQVDMEMAFANSEDVMKIIEKTVSEVWSKFSKKRGLLTLDSKGTLVPAKKENGT 292

Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           VS    R+ Y+ A+  YG DKPDLR P + + N+       EF  FS +    P +EV  
Sbjct: 293 VS--IFRMTYEQAMTSYGIDKPDLRAPDLKIINL------GEFNAFSHLNKKFPVFEV-I 343

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAY-----IFWRLDESGNVAGMGPVAKHLNIVN 383
           I          + +R   W+         Y     +    DE  N              N
Sbjct: 344 ILRNAFSNMEEYKER---WSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFEN 400

Query: 384 TEAIRVRLDMQDGD----------SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
              I   L ++ GD             F    PL           H       +N +   
Sbjct: 401 PHLITKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDV-- 458

Query: 434 FCWIMDFPFYE---------------WNEEEK-KIDFAHNPFTMPQ-GGMESLKGNDLLS 476
             WI+DFP +                + E EK ++   H+PFTM +    E L+      
Sbjct: 459 ASWIVDFPLFSPVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKC 518

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +    YDLV NG E+  G  R H   +    F ++ +  +     FG L  A   G PPH
Sbjct: 519 LGQ-HYDLVVNGVELGGGSTRIHDPRLQDYIFEDI-LKIDNAYELFGHLLNAXDMGTPPH 576

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
            G A G DR+  ++   +++R+V  FP S    DL++ SPS +
Sbjct: 577 AGFAIGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVI 619


>gi|256086206|ref|XP_002579294.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238664719|emb|CAZ35533.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 508

 Score =  201 bits (511), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 177/610 (29%), Positives = 266/610 (43%), Gaps = 128/610 (20%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  S  D     + S V + GW+   R      FL +RD  G+ Q+  + +S   +I + 
Sbjct: 8   RQASLYDARDKHINSTVTVCGWLEFCRLSSR--FLVLRDDRGLIQIYCDKNS--LKIPQ- 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
             SE VL + G V +R  + +N  + TG         EI  VAE + +            
Sbjct: 63  FNSESVLRVTGKVQARPEKDVNKRMPTG---------EIEIVAESIEI------------ 101

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI--LTASSPEGARDFLV 182
                                                +  S+P+  L   +  GAR+F+V
Sbjct: 102 -------------------------------------LSHSSPLSFLPKDAANGAREFVV 124

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P++   G +Y LPQ+PQQ+KQLLM SGF +Y Q+A CFRDE  RSDR P EF QLD+EM+
Sbjct: 125 PTKF-PGLWYCLPQSPQQFKQLLMISGFSKYMQVARCFRDETSRSDRQP-EFTQLDIEMA 182

Query: 243 FVEQDDILNTMENVLRGVFEEFSNG---NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           F+   DI   +EN+L  ++    +      +S  FLR+ Y DA+ RYG+DKPD+R   + 
Sbjct: 183 FITPYDIYEIIENMLLYIWPTVQSTLGCQPISTPFLRMQYCDAMSRYGSDKPDVRFGFLF 242

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
                              S   G+  + IP K            N  A   G   L  +
Sbjct: 243 S-----------------YSAVDGHTGFNIPRKYSS---------NLSAEDLG--SLEDL 274

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRV-RLDMQD------GDSCFFIAGDPLKFCSF 412
            +RL             + ++I   + I+  +LD+ +      GD   FI G+       
Sbjct: 275 VFRL-----------TGQRISIFTVQNIKSNQLDLLNLLKPECGDLVVFIKGNTEIELKA 323

Query: 413 AADARNHIAQELGIINCNCFE----FCWIMDFPFYEWNE--EEKKIDFAHNPFTMPQGGM 466
              AR  +A+ +     + +E    F WI  FP +E N   + K +   H+PFT      
Sbjct: 324 LGMARVEVAKLIDSKGLSIYEPEFHFLWINQFPLFEKNNLGQWKSV---HHPFTAASPET 380

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
                 D   +    YDLVCNG E+  G IR H  EV    F+ + + +   E  +    
Sbjct: 381 AHFLYTDPSKVIGLHYDLVCNGQEVGGGSIRVHNPEVQKYIFTEI-LKENSCEMEY--FL 437

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            A   G PPHGGIA G+DR++ + + AK++R+V  FP + +  DLL G+P+ V  E L +
Sbjct: 438 TALNSGAPPHGGIALGLDRLIAIFVNAKSIRDVIAFPKAADGKDLLCGTPTMVDDEILSQ 497

Query: 587 LGLRIVENPK 596
             + +  + K
Sbjct: 498 YCISVSNHSK 507


>gi|70994380|ref|XP_751992.1| aspartyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66849626|gb|EAL89954.1| aspartyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
          Length = 680

 Score =  201 bits (510), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 158/505 (31%), Positives = 235/505 (46%), Gaps = 64/505 (12%)

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMR-----CRMIAENFIECSTPILTASSPEGARDF 180
           ++R+L LR D+  ++ ++ R ++ N  R     CR     F+E  TP+L  S+PEGAR+F
Sbjct: 197 EHRYLQLRSDSELRDALRFRAQVRNICREELEQCR---PPFVEIETPLLFKSTPEGAREF 253

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+E
Sbjct: 254 LVPTR-RRGLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLE 311

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR---------RYGTD-- 289
           MSF   +D++ T+E ++R ++         S  F R+ Y DA+          RYG +  
Sbjct: 312 MSFATGEDVMRTVEGIIRRLWSSLMKDEAPSGPFRRMPYQDAMSRYGSDKPDTRYGMEIF 371

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCD 342
           K D   P+ + N            F    + N     +         PA     N     
Sbjct: 372 KIDYLLPVDLVNKITPLTDPIIEAFKFEGNDNDPVATYEFIKQFLDSPAGAPFNNNP--- 428

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
                   +G PG+ +++   D    + G+ P          E I   LD   GD     
Sbjct: 429 --------EGGPGV-FVY---DAKKPLCGLQP----FGFEAAERIEELLDPDHGDLIVIQ 472

Query: 403 AGDPLKFCSFAAD------ARNHIAQELGIINCNC-FEFCWIMDFPFYEWNEEEKK---- 451
           A +   F   +        A +  A   G       F+F W++DFP +  + + +     
Sbjct: 473 ARERAPFTGGSTPIGDLRRALHTAAVSSGFKPAPTGFDFLWVVDFPLFSPSSDSEPGQGG 532

Query: 452 ---IDFAHNPFTMPQGGMESLKG-NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
              I   H+PFT P+   +  +   D     A  YDLV NG E+  G  R H + V    
Sbjct: 533 AAGISSTHHPFTAPKTAADVDQLLTDPTKAVADHYDLVVNGVELGGGSRRIHDAAVQEFI 592

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS-Q 566
             ++   K      F  L  A + G PPH G+A G DR+V ++LG ++VR+V  FP + +
Sbjct: 593 LRDILQMKPERLADFSHLLDALRAGCPPHAGLALGFDRLVAVMLGKESVRDVIAFPKTGK 652

Query: 567 NFCDLLMGSPSTVSVEQLRELGLRI 591
              D ++ +PS ++ E L    LR+
Sbjct: 653 GGDDAMVKAPSMMTKEALETYHLRL 677


>gi|110589242|gb|ABG77130.1| aspartyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 245

 Score =  200 bits (509), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 97/214 (45%), Positives = 141/214 (65%), Gaps = 1/214 (0%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFE 60
           H  R+H CG+L  S +   V + GWVHR R HGG+IF+D+RD  G+ QVV +PD S  F 
Sbjct: 25  HFMRSHYCGELSSSHIDQEVEICGWVHRRRDHGGVIFIDLRDREGLVQVVYDPDRSEIFS 84

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA+ VR+E+VL + G V  R   T+N ++ TG+IE+   ++E+L+ AE  P  +      
Sbjct: 85  IAEHVRNEFVLRVKGRVRPRPEGTVNPDLPTGEIEILGLELEVLNRAETPPFQLDEHENT 144

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YR++DLRR  + + I  R ++  S+R  +    F++  TP+LT ++PEGARD+
Sbjct: 145 SEEVRLRYRYVDLRRPEMLEKIRIRAQVTRSLRRFLDDRAFLDIETPMLTKATPEGARDY 204

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           LVPSR + G F+ALPQ+PQ +KQLLM SG DRY+
Sbjct: 205 LVPSRTHPGQFFALPQSPQLFKQLLMMSGMDRYY 238


>gi|167947825|ref|ZP_02534899.1| aspartyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 219

 Score =  200 bits (508), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 96/211 (45%), Positives = 140/211 (66%), Gaps = 1/211 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG+L  S +   V + GWVHR R HGG+IF+D+RD  G+ QVV +PD S  F IA+
Sbjct: 2   RSHYCGELSSSHIDQEVEICGWVHRRRDHGGVIFIDLRDREGLVQVVYDPDRSEIFSIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+VL + G V  R   T+N ++ TG+IE+   ++E+L+ AE  P  +       E 
Sbjct: 62  HVRNEFVLRVKGRVRPRPEGTVNPDLPTGEIEILGLELEVLNRAETPPFQLDEHENTSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR++DLRR  + + I  R ++  S+R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 122 VRLRYRYVDLRRPEMLEKIRIRAQVTRSLRRFLDDRAFLDIETPMLTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           SR + G F+ALPQ+PQ +KQLLM SG DRY+
Sbjct: 182 SRTHPGQFFALPQSPQLFKQLLMMSGMDRYY 212


>gi|114565516|ref|XP_001150083.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 4
           [Pan troglodytes]
          Length = 586

 Score =  199 bits (507), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 166/598 (27%), Positives = 278/598 (46%), Gaps = 84/598 (14%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R +YR+LDLR   +  N+         +R +M+ +                  R++L
Sbjct: 167 EALRLQYRYLDLRSFQMQYNL--------RLRSQMVMK-----------------MREYL 201

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                N   F  + + P  +K                          R PG    +D+EM
Sbjct: 202 C----NLHGFVDI-ETPTLFK--------------------------RTPG----IDIEM 226

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  + + +
Sbjct: 227 SFVDQTGIQSLIEGLLQ--YSWPNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMKIID 284

Query: 302 VTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +++ F ++E       LS   G  +   IP       R   + + ++A       +  +F
Sbjct: 285 ISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQEILPVF 344

Query: 361 WRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              + + N     PVA   +     E IR+ ++ Q+ D     AG+  K CS     R  
Sbjct: 345 LNANRNWN----SPVANFIMESQRLELIRL-METQEEDVVLLTAGEHNKACSLLGKLRLE 399

Query: 420 IAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473
            A  L   G++  +   F F W++DFP +   EE  ++++ AH+PFT P      L   +
Sbjct: 400 CADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTE 459

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
               ++  YDLV NG EI  G IR H +E  LQ +    + KE V+     L +A   G 
Sbjct: 460 PKKARSQHYDLVLNGNEIGGGSIRIHNAE--LQRYILATLLKEDVK-MLSHLLQALDYGA 516

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGGIA G+DR++ L+ G++++R+V  FP S    DL+  +P +V  E+L+   +R+
Sbjct: 517 PPHGGIALGLDRLICLVTGSRSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRV 574


>gi|1183838|dbj|BAA11815.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa]
          Length = 361

 Score =  198 bits (504), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 192/365 (52%), Gaps = 7/365 (1%)

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF Q+D+E SF+++ DI+   E ++R +F+E  +     + F  + +++A+RRYG+DKPD
Sbjct: 1   EFTQIDIETSFLDESDIIGITEKMVRQLFKEVLD--VEFDEFPHMPFEEAMRRYGSDKPD 58

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQ 351
           LR P+ + +V +     EF+VFS   + +P   V A+   G     R+  D   ++    
Sbjct: 59  LRIPLELVDVADQLKEVEFKVFSGPAN-DPKGRVAALRVPGAASMPRSQIDDYTKFVGIY 117

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G  GLAYI       G      P+ K +   N   I  R+   DGD  FF A      C 
Sbjct: 118 GAKGLAYIKVNERAKGVEGLQSPIVKFIPEANLNVILDRVGAVDGDIVFFGADKAKIVCD 177

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
                R  +  +L ++    +   W++DFP +E N++   +   H+PFT P+     L+ 
Sbjct: 178 ALGALRIKVGHDLKLLTRE-WAPMWVVDFPMFEENDD-GSLSALHHPFTSPKCTPAELEA 235

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           N   ++ +  YD+V NG E+  G IR H   +    F  +GI +   E +FG L  A + 
Sbjct: 236 NPGAAL-SRAYDMVLNGTELGGGSIRIHDKSMQQAVFRVLGIDEAEQEEKFGFLLDALKY 294

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G+DR+VML+ GA ++REV  FP +Q+  D++  +P +V  + LREL +R+
Sbjct: 295 GAPPHGGLAFGLDRLVMLMTGASSIREVIAFPKTQSAGDVMTQAPGSVDGKALRELHIRL 354

Query: 592 VENPK 596
            E  K
Sbjct: 355 REQAK 359


>gi|194674189|ref|XP_001789065.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Bos
           taurus]
          Length = 456

 Score =  196 bits (498), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 112/305 (36%), Positives = 179/305 (58%), Gaps = 15/305 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +   IFL +RD +G+ QVV   D +   + K 
Sbjct: 47  RTNTCGELRSSHLGQEVTLCGWIQFRRQN---IFLVLRDFHGLVQVVIPQDESAASVKKI 103

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  ++L+  ++LP  +    +  
Sbjct: 104 LCEAPMESVVQVSGTVISRPPGQKNPKMPTGEIEIKVKTAKLLNSCKKLPFEIKDFMKKT 163

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR   C +    F++  TP L   +P GA+
Sbjct: 164 ETLRLQYRYLDLRSVQMQYNLRLRSQMVMKMREYLCNL--HGFVDVETPTLFKRTPGGAK 221

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +F++PSR   G FY+LPQ+PQQ+K   M  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 222 EFVIPSR-EPGKFYSLPQSPQQFKPPHMLGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 279

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  + + +E +L+  +   S+ + +   F  + + +A+  YGTDKPD R  + 
Sbjct: 280 IEMSFVDQTGVQSLIEGLLQ--YSWPSDKDPLVVPFPSMPFAEALASYGTDKPDTRFGMK 337

Query: 299 MHNVT 303
           +H+ T
Sbjct: 338 LHHKT 342


>gi|299783164|gb|ADJ41162.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Lactobacillus fermentum CECT 5716]
          Length = 343

 Score =  196 bits (498), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 127/348 (36%), Positives = 192/348 (55%), Gaps = 13/348 (3%)

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           E +++ V +E + G  V   F R+ + +A+ +YG+DKPD R  +++ +V++    S F+V
Sbjct: 3   EGLIKRVMKE-AVGVDVPTPFPRMEWQEAMDKYGSDKPDTRFDMLIQDVSDLVKDSSFKV 61

Query: 314 FSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
           FS   +V  G  V AI   GG    +R    +  ++ +  G  GLA++  ++ E G    
Sbjct: 62  FSA--TVADGNFVRAIVVPGGADKYSRKDITKKEDYIKRYGAKGLAWV--KVTEEGY--- 114

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
            GPVAK LN  +  A+  RL  + GD   F+AG     C      R  IA+EL +I+ N 
Sbjct: 115 NGPVAKFLND-DANALNERLSAKVGDLVLFVAGSFHVVCDSLGYLRESIAKELDLIDENK 173

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLK-GNDLLSIKAFQYDLVCNGF 489
           F + W++++P +E++E   K   AH+PFTM  +  ++ L+ G D     A  YD+V NG 
Sbjct: 174 FNYLWVINWPMFEYDEGFGKWIAAHHPFTMLNEDDLKYLEEGEDPHQAHAQSYDIVLNGN 233

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G IR H  EV  + F  +G +KE  + RFG L +A + GMPP GG+A G+DR VML
Sbjct: 234 EIGGGSIRIHDPEVQEKVFKALGYTKEAAQARFGFLIKALENGMPPEGGMAFGLDRWVML 293

Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           L  A ++R+V  FP +    + L  +P TV  EQL  L L + E PK+
Sbjct: 294 LAHADSIRDVIAFPKNSKAVEPLTAAPGTVDDEQLZVLHLNVEEAPKE 341


>gi|322698256|gb|EFY90028.1| putative aspartate--tRNA ligase [Metarhizium acridum CQMa 102]
          Length = 694

 Score =  193 bits (490), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 156/538 (28%), Positives = 244/538 (45%), Gaps = 66/538 (12%)

Query: 114 VFGEREYPESIR-FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
           V  + ++P++ R  + RF       L   +  R+ + + +   ++ + F +  TP L  S
Sbjct: 168 VTSDVQFPQTKRHLQIRF----HPELQARLKFRSWLKSQLNQSLLEKRFTDVETPTLFKS 223

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + EGAR+FLVP+R  +G+ Y+L Q+PQQYKQ+LMASG  RY Q A C+RDED R+DR P 
Sbjct: 224 TSEGAREFLVPTR-QRGTAYSLSQSPQQYKQVLMASGIGRYMQWARCYRDEDLRTDRQP- 281

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-------------------- 272
           EF QLDME +F     +   + ++L           + S+                    
Sbjct: 282 EFSQLDMEWAFAGSAKVQADINDILLAALSRLRPARSYSDIRGERIPILSDILNEPAPTD 341

Query: 273 -----NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
                 F  + + ++I  YG+DKPDLR P  +H + +   + +F      LS +P  E +
Sbjct: 342 EPPAHKFTTLTFAESIAAYGSDKPDLRIPNKIHALEDTEPYRDFISMITHLS-DPLIEAF 400

Query: 328 AIPAKGGGGNRA------FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNI 381
             P K    + A      F D +   A +    G   I    D    + G   +      
Sbjct: 401 TFPLKDCSPSDARKFVIKFMDNLPP-ALANNPDGKPQILIH-DSRQPLCGFSSLGFEYES 458

Query: 382 VNTEAIRVRLDMQDGDSCFFIAGD--PLKFC---SFAADARNHI---------AQELGII 427
           V  + +     + DGD   F A +  P ++C   +   D R  +          ++  + 
Sbjct: 459 V-LDKLSQGQGINDGDLVVFQAREKPPGQYCLGSTKIGDIRKALWTGLVEEGYMEKPKLG 517

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTMP--QGGMESLKGNDLLSIK 478
           +    +F W+ +FP ++  EE +        I  AH+PFT P  +  +E L   D L  +
Sbjct: 518 DPESLQFVWVTEFPMFKPVEEGEPGQGGAAGISAAHHPFTAPLSEKDLEIL-FTDPLQAR 576

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG EI  G  R H+++V      +V    +     F  L+ A + G PPH G
Sbjct: 577 SAAYDLVLNGIEIGGGSERIHVADVQEFIMRDVLKMTDQRIKDFSHLFDALRAGCPPHAG 636

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            A G DR+V LL     VR+V  FP +    D  + SPS ++ EQL   GL+++   K
Sbjct: 637 FALGFDRLVALLTDTSTVRDVIAFPKTMKGEDPFVRSPSKLNNEQLAPYGLQLMSKSK 694


>gi|213854909|ref|ZP_03383149.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 371

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/373 (33%), Positives = 190/373 (50%), Gaps = 6/373 (1%)

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           ED R+DR P EF Q+D+E SF+    +   ME ++R ++ E    +    +F  + + +A
Sbjct: 1   EDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEA 57

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFC 341
            RRYG+DKPDLRNP+ + +V +     EF VF+   + +P   V A+   GG   +R   
Sbjct: 58  ERRYGSDKPDLRNPMELVDVADLLKSVEFAVFAGPAN-DPKGRVAALRVPGGAQLSRKQI 116

Query: 342 DRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
           D    + +  G  GLAYI       G      PVAK L     EAI  R   QDGD  FF
Sbjct: 117 DDYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFF 176

Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
            A +           R  + ++L + + + +   W++DFP +E ++ E  +   H+PFT 
Sbjct: 177 GADNKKVVADALGALRLKLGKDLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTA 235

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P+    S          A  YD+V NG+E+  G +R H  E+    F  +GI+++    +
Sbjct: 236 PRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREK 295

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
           FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+  +PS  + 
Sbjct: 296 FGFLLDALKYGTPPHVGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQ 355

Query: 582 EQLRELGLRIVEN 594
             L ELG+++V+ 
Sbjct: 356 AALTELGIQVVKK 368


>gi|322704787|gb|EFY96378.1| putative aspartate--tRNA ligase [Metarhizium anisopliae ARSEF 23]
          Length = 694

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 163/540 (30%), Positives = 250/540 (46%), Gaps = 66/540 (12%)

Query: 112 LPVFGEREYPESIR-FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           L V  + ++P++ R  + RF       L   +  R+ +   +   ++ + F +  TP L 
Sbjct: 166 LIVTSDVQFPQTKRHLQIRF----HPELQARLQFRSWLKGQLNQSLLEKGFTDVETPTLF 221

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            S+ EGAR+FLVP+R  +G+ YAL Q+PQQYKQ+LMASG  +Y Q A C+RDED R+DR 
Sbjct: 222 KSTSEGAREFLVPTR-QRGTAYALSQSPQQYKQILMASGIGQYMQWARCYRDEDLRTDRQ 280

Query: 231 PGEFYQLDMEMSF-----VEQD-------------------DILNTMENVLRGVFEEFSN 266
           P EF QLDME +F     V+ D                   DI      +L  +  E + 
Sbjct: 281 P-EFSQLDMEWAFAGSAKVQADVNDILLAALLRLRPARSYSDIRGERIPILSDILNEPAP 339

Query: 267 GN-TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
            + + ++ F  + + ++I  YG+DKPDLR P  +H + +   +  F      LS +P  E
Sbjct: 340 ADESPAHKFTTLTFAESIAAYGSDKPDLRIPNKIHALEDIEPYRNFVSMITHLS-DPLIE 398

Query: 326 VWAIPAKGGGGNRA------FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
            +  P K    + A      F D +   A +    G   I    D    ++G   +    
Sbjct: 399 AFTFPLKDCSPSEARKFIIKFMDNLPP-ALANNPDGKPQILIH-DSRQPLSGFSSLGFEY 456

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPL--KFC---SFAADARNHIAQEL---------G 425
             V  + +     + DGD   F A +    ++C   +   D RN + + L          
Sbjct: 457 ESV-LDKLSQGQGINDGDLVVFQAREKPQGQYCLGSTKIGDIRNALWKGLVEEGYMEKPK 515

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTMP--QGGMESLKGNDLLS 476
           + +    +F W+ +FP ++  EE +        I  AH+PFT P  +  +E L   D L 
Sbjct: 516 LGDPESLQFVWVTEFPMFKPVEEGEPGQGGAAGISAAHHPFTAPLSENDLEIL-FTDPLQ 574

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
            ++  YDLV NG EI  G  R H+++V      +V    +     F  L+ A + G PPH
Sbjct: 575 ARSAAYDLVLNGIEIGGGSERIHVADVQEFIMRDVLKMTDQRIKDFSHLFDALRAGCPPH 634

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G A G DR+V LL     VR+V  FP +    D  + SPS +S EQL   GL+++   K
Sbjct: 635 AGFALGFDRLVALLTDTSTVRDVIAFPKTMKGEDPFVRSPSKLSNEQLAPYGLQLMSKSK 694


>gi|118094150|ref|XP_422251.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 561

 Score =  191 bits (486), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/380 (35%), Positives = 196/380 (51%), Gaps = 20/380 (5%)

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           +GA++FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF
Sbjct: 6   QGAKEFLVPSR-EAGKFYSLPQSPQQFKQLLMIGGLDRYFQVARCYRDEGSRPDRQP-EF 63

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            Q+D+EMSFV+Q  I   +E +L+  + E      ++  F  + YD+A+  YGTDKPD R
Sbjct: 64  TQIDIEMSFVDQAGIQRLIEGLLQYSWPE--ERGPITTPFPTMTYDEALADYGTDKPDTR 121

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGY-EVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
             + + ++++     +      +L+   G  +   IP           + + E A+S+  
Sbjct: 122 FGMKIVDISDTLRRLDIGFVQNVLTYPHGTAKAICIPQGARYLKHKDLESLKEAAKSRFN 181

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
             +  +  R D  G++  +  + K L     +E IRV L+MQ  D      GD  + CS 
Sbjct: 182 QEIMDVICRPD--GSLKSL--LTKFLGEEQQSELIRV-LNMQVDDVVLLAVGDHKRVCSA 236

Query: 413 AADARNHIAQEL---GII--NCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGM 466
               R   A  L   G++  +     F W++DFP +   EE   +++ AH+PFT P    
Sbjct: 237 LGSLRLESADLLEAAGMVLRDPAALHFLWVVDFPLFLPKEENPSELESAHHPFTAPHPLD 296

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
                +D   +++  YDLV NG EI  G IR H +E   Q F    + KE  E     L 
Sbjct: 297 TDFLYSDPTKVRSQHYDLVLNGSEIGGGSIRIHNAEQ--QRFVLEKVLKEDSE-VLSHLL 353

Query: 527 RAFQCGMPPHGGIAAGIDRI 546
            A + G PPHGGIA G  R+
Sbjct: 354 EALEFGAPPHGGIALGSLRL 373



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 88/162 (54%), Gaps = 4/162 (2%)

Query: 431 CFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
              F W++DFP +   EE   +++ AH+PFT P      L  +D   +++  YDLV NG 
Sbjct: 391 ALHFLWVVDFPLFLPKEENPSELESAHHPFTAPHPLDTDLLYSDPTKVRSQHYDLVLNGS 450

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G IR H +E   Q F    + KE  E     L  A + G PPHGGIA G+DR++ L
Sbjct: 451 EIGGGSIRIHNAEQ--QRFVLEKVLKEDSE-VLSHLLEALEFGAPPHGGIALGLDRLISL 507

Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           ++G+ ++R+V  FP S    DL+  +P  V+ E+L    + +
Sbjct: 508 IVGSPSIRDVIAFPKSFKGRDLMGNAPDYVTPEELEPYHIHV 549


>gi|28385930|gb|AAH46429.1| Dars2 protein [Mus musculus]
          Length = 413

 Score =  191 bits (485), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 204/401 (50%), Gaps = 19/401 (4%)

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
           ++KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+EMSFVEQ  I   +E +L+ 
Sbjct: 4   RFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIEMSFVEQTGIQRLVEGLLQ- 61

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
            +    + + +   F  + + +A+  YGTDKPD R  + + +V++ F ++E R     L+
Sbjct: 62  -YSWPGDKDPLVTPFPSMTFAEALATYGTDKPDTRFGMKIVDVSDVFRNTELRFLQDALA 120

Query: 320 VNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAK 377
             P   V AI    G     +   + + ++A       +  IF  L+   N +   P AK
Sbjct: 121 -KPQGTVKAIRVHDGAKYLRKEDIEFIRKFAVHHFSQEVLPIF--LNAKKNWSS--PFAK 175

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-----IINCNCF 432
            +       +   L++Q+ D     AG+  K CS     R   A  L      + +   F
Sbjct: 176 FIMEEERLELARSLEIQEEDIVLLTAGEHEKACSLLGKLRLECADLLEMRGAVLRDPAVF 235

Query: 433 EFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
            F W++DFP +   EE   +++ AH+PFT P      L   +   ++   YDLV NG EI
Sbjct: 236 SFLWVVDFPLFLAKEESPTELESAHHPFTAPNSSDIHLLYTEPEKVRGQHYDLVLNGNEI 295

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R H  +  LQ +    + KE V+     L +A   G PPHGGIA G+DR+V L+ 
Sbjct: 296 GGGSVRIH--DAQLQRYILETLLKEDVK-LLSHLLQALDYGAPPHGGIALGLDRLVCLVT 352

Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GA ++R+V  FP S    DL+  +P +VS E+L+   + ++
Sbjct: 353 GAPSIRDVIAFPKSYRGQDLMSNAPDSVSPEELKPYHIHVL 393


>gi|302409574|ref|XP_003002621.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261358654|gb|EEY21082.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 599

 Score =  190 bits (483), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 159/524 (30%), Positives = 231/524 (44%), Gaps = 68/524 (12%)

Query: 129 RFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R L LR    L +++  R  +  S+   M    +++  TP L  S+ EGAR+FLVP+R  
Sbjct: 80  RHLQLRFHAKLKESLRFRAFLKASLGQTMSKLGYMDVETPTLFKSTSEGAREFLVPTR-R 138

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
            G  YALPQ+PQQYKQ+LMA+G   Y+Q A C+RDED R+DR P EF Q+D+E SF   +
Sbjct: 139 AGHAYALPQSPQQYKQVLMAAGLGGYYQFARCYRDEDHRADRQP-EFTQMDLEKSFATGE 197

Query: 248 DILNTMENVLRGVFE--------------------------EFSNGNTV--------SNN 273
            I   +E  ++  ++                          E S G  V        +  
Sbjct: 198 TIQADVEAFMQATWDAMREEYNRKADDTSFIPHRKSAQSSDEPSGGEPVPYKDYPAIATP 257

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           F R+ Y + +  YG+DKPDLR P  +  V  H       + + +   NP  + W      
Sbjct: 258 FRRMKYQECMDLYGSDKPDLRIPNRIERVDTHLSPGFVSMITDL--ENPIVDAWVFRPHE 315

Query: 334 GGGNRAFCDRMNEW----ARSQGQ-PGLAYIFWRLDESGNVAG---MGPVA-KHLNIVNT 384
               +   + M  +     +S  Q P  A      D S  + G   +GP   K L    +
Sbjct: 316 DADRKEVHEFMQNFLQNLHKSHSQNPDGAPQALMYDTSKPLEGFSALGPDGLKTLQDAAS 375

Query: 385 EAIRVRLDMQDGDSCFFIA-------GDPLKFCSFAADARNHIAQELGIIN-CNCFEFCW 436
               +   +++GD   F A       G   K       A  H A E  ++   + F+F W
Sbjct: 376 PESGLST-LENGDVVVFQARQDRPHQGGSTKLGEVRI-ALYHAAIEAQLLERDDSFQFLW 433

Query: 437 IMDFPFYEWNEE-------EKKIDFAHNPFTMPQGGMESLK--GNDLLSIKAFQYDLVCN 487
           + DFP +  NEE              H+PFT P   +E L+    D L  KA  YDLV N
Sbjct: 434 VTDFPMFTPNEEVDVGQGGSSGFSATHHPFTAPL-TVEDLELLFTDPLKAKADHYDLVLN 492

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G E+  G  R H++ +    F ++    +     F  L +A + G PPH G A G DR  
Sbjct: 493 GVELGGGSRRIHVAAMQEFIFRDILQMTKPKMAEFSHLLKALRAGCPPHAGFALGFDRFA 552

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            +L G+ +VR+V  FP +    D   G P  +S EQL    L++
Sbjct: 553 AVLSGSSSVRDVIAFPKNNKGVDEFAGGPGKISDEQLTTYHLQL 596


>gi|309799291|ref|ZP_07693538.1| aspartyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308117069|gb|EFO54498.1| aspartyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 254

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 109/246 (44%), Positives = 152/246 (61%), Gaps = 16/246 (6%)

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
            FI+  TP L+ S+PEGARD+LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  C
Sbjct: 5   EFIDVETPFLSKSTPEGARDYLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKC 64

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           FRDED R DR P EF Q+D+E SF+ + +I +  E ++  V +E + G  V+  F R+ Y
Sbjct: 65  FRDEDLRGDRQP-EFTQVDLETSFLTEQEIQDITEGLIARVMKE-TKGIEVTLPFPRMKY 122

Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-- 337
           DDA+  YG+DKPD R  +++ ++T+     +F+VFS+  +V       AI  KG   N  
Sbjct: 123 DDAMAFYGSDKPDTRFEMLLQDLTDLVKGVDFKVFSEAPAVK------AIVVKGAADNYS 176

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           R   D+M E A+  G  GLA++   +D   N    GPVAK L  +  + +   L ++D D
Sbjct: 177 RKDIDKMTEVAKQYGAKGLAWV-KVVDGELN----GPVAKFLTGIQAD-LTTALGLEDKD 230

Query: 398 SCFFIA 403
              F+A
Sbjct: 231 LVLFVA 236


>gi|76664737|emb|CAJ17808.1| aspartyl-tRNA synthetase [Candidatus Phytoplasma solani]
          Length = 225

 Score =  186 bits (473), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 94/227 (41%), Positives = 142/227 (62%), Gaps = 2/227 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M    +    +L + + G  V L G++ R R  G  +FLD+RD  GI Q++       ++
Sbjct: 1   MQNKHSRYNNELTLQNKGEAVFLKGFLFRKRNLGKTLFLDLRDVSGIIQLLIKETHPQYQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              +++ E V+ I GLV+ RS +  N  + T +IE+    + +L+ A+ LPL VF  ++ 
Sbjct: 61  QIIALKLETVVEIKGLVVERSNK--NTKLKTSEIEILVSYLNVLNEAQTLPLNVFRSQDS 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLR   +   +++R  I  S+R  ++  +F+E  TPIL+ S+PEGARD+
Sbjct: 119 LEETRLKYRYLDLRNPDIKYFLIQRHHITQSIRQTLLKNDFLELETPILSKSTPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           LVPSR+  G+FYALPQ+PQ +KQL M +GF+RYFQ+A CFRDED R+
Sbjct: 179 LVPSRIYPGNFYALPQSPQLFKQLYMIAGFERYFQVARCFRDEDLRA 225


>gi|266626100|ref|ZP_06119035.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288861994|gb|EFC94292.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 192

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 92/183 (50%), Positives = 132/183 (72%), Gaps = 2/183 (1%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  + +NI+ R++     R  +  E F E  TP L  S+PEGARD+L
Sbjct: 7   EELRLKYRYLDLRRPDIQRNIMVRSQAAIITRAFLAEEGFFEIETPTLIKSTPEGARDYL 66

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQ+A C+RDED R+DR P EF Q+D+E+
Sbjct: 67  VPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQLARCYRDEDLRADRQP-EFTQIDLEL 125

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ +D+L+  E +L+ +F+E  N + +     R+ + +A+ R+G+DKPDLR  + + N
Sbjct: 126 SFVDVEDVLDVNERLLKRLFKEICNFD-LELPIPRMTWHEAMDRFGSDKPDLRFGMELKN 184

Query: 302 VTE 304
           V++
Sbjct: 185 VSD 187


>gi|255030116|ref|ZP_05302067.1| aspartyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 321

 Score =  183 bits (465), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/324 (34%), Positives = 170/324 (52%), Gaps = 9/324 (2%)

Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-- 336
           Y +A+ R+G+DKPD+R  + + NV++     +F+VF    ++  G EV AI AK      
Sbjct: 1   YKEAMDRFGSDKPDIRFGLELQNVSDVVKDVDFKVFQS--AIENGGEVKAINAKAAAANF 58

Query: 337 NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
           +R   D +  +  + G  GLA   W   E+G + G  P+AK         ++V L  +DG
Sbjct: 59  SRKDLDALGVFVANYGAKGLA---WLKVEAGELKG--PIAKFFPEDKAAELKVALQAEDG 113

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D   F A       +     RN + ++L +IN     F W+ D+P +E++EE ++   AH
Sbjct: 114 DLLLFAADKADIVAASLGALRNKLGKDLNLINEEELAFLWVTDWPLFEYDEEAERYVSAH 173

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +PFT+P+     L   D   + A  YD+V NG+EI  G +R +  EV    F  +G + E
Sbjct: 174 HPFTLPKEEDIPLLETDSSKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDE 233

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
             + +FG L  A + G PPHGGIA G+DRIVM+L G  N+R+   FP + +  D L  +P
Sbjct: 234 SAKEQFGFLMDALEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAP 293

Query: 577 STVSVEQLRELGLRIVENPKKILK 600
             VS  QL EL L  V+   K+ K
Sbjct: 294 GEVSEAQLAELKLETVKKENKLKK 317


>gi|227555482|ref|ZP_03985529.1| possible aspartyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|227175378|gb|EEI56350.1| possible aspartyl-tRNA synthetase [Enterococcus faecalis HH22]
          Length = 303

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/307 (35%), Positives = 166/307 (54%), Gaps = 10/307 (3%)

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMN 345
           +DKPD R  + + +V E     +F+VF   L  N G+ V A+ AKG     +R   D + 
Sbjct: 1   SDKPDTRFAMELIDVAEVVKDVDFKVFQAALE-NGGH-VKALNAKGAADKYSRKDMDNLG 58

Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD 405
           ++    G  GLA++  +++E G     GP+AK L  V+ E I    + + GD   F A  
Sbjct: 59  KYVSQFGAKGLAWL--KVEEDGL---KGPIAKFLTEVSDELIAAT-NAEVGDILMFGADK 112

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
           P    +     R  + +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+  
Sbjct: 113 PEIVAAALGAVRTRLGKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAE 172

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
                  D  S+ A  YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L
Sbjct: 173 DVDRLATDPASVYAEAYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFL 232

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             A   G PPHGGIA G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL 
Sbjct: 233 LDALDYGFPPHGGIALGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLF 292

Query: 586 ELGLRIV 592
           EL + + 
Sbjct: 293 ELNIDVT 299


>gi|315282430|ref|ZP_07870847.1| aspartyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613935|gb|EFR87662.1| aspartyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 331

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/328 (34%), Positives = 170/328 (51%), Gaps = 9/328 (2%)

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           T+   F R+ Y +A+ R+G+DKPD+R  + + NV+E     +F+VF    ++  G EV A
Sbjct: 8   TIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQNVSEVVKDVDFKVFQS--AIENGGEVKA 65

Query: 329 IPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386
           I AK      +R   D +  +  + G  GLA   W   E+G + G  P+AK         
Sbjct: 66  INAKAAAANFSRKDLDALGVFVANYGAKGLA---WLKVEAGELKG--PIAKFFPEDKAAE 120

Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWN 446
           ++  L  +DGD   F A       +     RN + ++L +IN     F W+ D+P +E++
Sbjct: 121 LQAALQAEDGDLLLFAADKADIVAASLGALRNKLGKDLNLINEEELAFLWVTDWPLFEYD 180

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           EE  +   AH+PFT+P+     L   D   + A  YD+V NG+EI  G +R +  EV   
Sbjct: 181 EEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAEAYDIVLNGYEIGGGSLRIYKKEVQES 240

Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            F  +G + E  + +FG L  A + G PPHGGIA G+DRIVM+L G  N+R+   FP + 
Sbjct: 241 MFRALGFTDESAKEQFGFLMEALEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFPKTG 300

Query: 567 NFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +  D L  +P  VS  QL EL L  V+ 
Sbjct: 301 SAVDPLTNAPGEVSAAQLAELKLETVKK 328


>gi|296390679|ref|ZP_06880154.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 203

 Score =  179 bits (454), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/201 (46%), Positives = 124/201 (61%), Gaps = 1/201 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLD+RD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDVRDREGLAQVVFDPDRAETFAKAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R     N N+ +G IE+   ++E+L+ AE  P P+    +  E 
Sbjct: 63  RVRSEFVVKITGKVRLRPEGARNPNMASGSIEVLGYELEVLNQAETPPFPLDEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  +   +  R RI +S+R  +    F++  TPIL   +PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAAKLKLRARITSSIRRYLDDNGFLDVETPILGRPTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQL 204
           SR   G F+ALPQ+PQ +KQL
Sbjct: 183 SRTYPGHFFALPQSPQLFKQL 203


>gi|330896124|gb|EGH28345.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 194

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 90/192 (46%), Positives = 125/192 (65%), Gaps = 1/192 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD A  F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALP 195
           SR + GSF+ALP
Sbjct: 183 SRTHPGSFFALP 194


>gi|266625685|ref|ZP_06118620.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288862408|gb|EFC94706.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 307

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 165/311 (53%), Gaps = 7/311 (2%)

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDR 343
           R+G+DKPDLR  + + NV++     EF VF   L    G  V  I A G G   R   D 
Sbjct: 1   RFGSDKPDLRFGMELKNVSDVVRGCEFAVFKNALEA--GGSVRGINADGQGAMPRKKIDA 58

Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403
           + E+A+  G  GLAYI   + E G        AK +      A+   +  + GD   F A
Sbjct: 59  LVEYAKGFGAKGLAYI--AIAEDGTYKS--SFAKFMTEDELHALVEAMAGKPGDLLLFAA 114

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463
                      + R  +A++  ++  + F+F W+ +FP  E++EE+ +    H+PFTMP 
Sbjct: 115 DKDKVVFDVLGNLRLELARQQDLLKKDDFKFLWVTEFPLLEYSEEQGRFVAMHHPFTMPM 174

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                L  +D  +++A  YD+V NG E+  G +R H  ++  + F  +G + E  + +FG
Sbjct: 175 DEDWHLIDSDPGAVRAKAYDIVLNGTEMGGGSVRIHQGDIQSKMFEVLGFTPEQAQEQFG 234

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            L  AF+ G+PPH G+A G+DR++ML++GA ++R+V  FP  ++  D++  +P+ V  +Q
Sbjct: 235 FLLDAFKYGVPPHAGLAYGLDRMIMLMVGADSIRDVIAFPKVKDASDMMTEAPAPVDEKQ 294

Query: 584 LRELGLRIVEN 594
           L ELG+ + E 
Sbjct: 295 LEELGIEVSET 305


>gi|312379942|gb|EFR26078.1| hypothetical protein AND_08074 [Anopheles darlingi]
          Length = 366

 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/256 (39%), Positives = 151/256 (58%), Gaps = 7/256 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L     G  V L GW+   R      F  +RD YG  Q +   +         
Sbjct: 96  RTHTCGELRAEHAGQSVTLCGWLEFSRMSK---FFTLRDGYGTVQALIAEEDGPRIPLDG 152

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPES 123
           +  E +L + G V  R     N  + TG+IE+  +K+E+L+ +++ LP+ V       E+
Sbjct: 153 LPFESILRVTGKVQLRPDGQHNRFMPTGEIEVHVEKLEVLNESKKRLPINVKDHNRAKEN 212

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFLV 182
           +R +YR++DLR   + +N+  R+++I +MR  MI +  F+E  TP L   +P GA++F+V
Sbjct: 213 LRLEYRYIDLRNPQMQRNLRLRSQVIMTMRECMINDFGFLEVETPTLFRRTPGGAQEFVV 272

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FY+L Q+PQQ+KQ+LM    DRYFQIA C+RDE  R DR P EF QLD+E+S
Sbjct: 273 PSR-KPGHFYSLVQSPQQFKQMLMVGAIDRYFQIARCYRDESTRPDRQP-EFTQLDIELS 330

Query: 243 FVEQDDILNTMENVLR 258
           F +++ ++  +E VLR
Sbjct: 331 FTDREKVIALVEAVLR 346


>gi|330975331|gb|EGH75397.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 306

 Score =  174 bits (440), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/309 (35%), Positives = 163/309 (52%), Gaps = 7/309 (2%)

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWA 348
           KPDLRNP+ + +V +     EF+VFS   + +P   V A+   G     R+  D   ++ 
Sbjct: 1   KPDLRNPLELVDVADQLTGVEFKVFSGPAN-DPKGRVAALRVPGAASMARSQIDDYTKFV 59

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
              G  GLAYI       G      P+ K +   N   I  R+   DGD  FF A D  K
Sbjct: 60  SIYGAKGLAYIKVNERAKGPEGLQSPIVKFIPEDNLNVILDRVGAVDGDIVFFGA-DNFK 118

Query: 409 FCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
             S A  A R  I  +L +  C  +   W++DFP +E N++       H+PFT P+   E
Sbjct: 119 IVSEALGALRIKIGNDLKLHTCE-WAPMWVVDFPMFEENDD-GSFTALHHPFTAPKCTPE 176

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
            L+ N   ++ +  YD+V NG E+  G IR H  E+    F  +GI+++  + +FG L  
Sbjct: 177 ELEANPATAL-SRAYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLD 235

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           A + G PPHGG+A G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL
Sbjct: 236 ALKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALREL 295

Query: 588 GLRIVENPK 596
            +R+ E PK
Sbjct: 296 HIRLREQPK 304


>gi|50556998|ref|XP_505907.1| YALI0F26433p [Yarrowia lipolytica]
 gi|49651777|emb|CAG78719.1| YALI0F26433p [Yarrowia lipolytica]
          Length = 649

 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 171/323 (52%), Gaps = 39/323 (12%)

Query: 5   RTHSCGDL-----GVSDVGSFVRLSGWVHRVRPHG---GIIFLDIRDHYG-ITQVVANPD 55
           RTHS   L      +      V L GW+H+ +P      + F  +RD  G I Q+V   D
Sbjct: 44  RTHSITGLLKDAPALEQSQKKVTLQGWIHK-KPRKVSKNLTFASLRDTNGDIIQLV---D 99

Query: 56  SACFEIAKSVRSEWVLCIDGLVMS-RSAETINANIITGQIELSAQKIEILSVAEEL--PL 112
           S    + +S++ E  + ++G+V   R+A+        G  +L      +L+ A E    L
Sbjct: 100 SNSPSMLRSMKPESAVVVEGVVAKQRTAKK-------GVFDLVVSSSSVLNEANEKGSQL 152

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
            +   +++P     +YR+L LR+  L   +  R   + + R  +    F E  TP+L  S
Sbjct: 153 TLGDTKDWPA----EYRYLQLRQPQLQAALKLRANAMRASRSVLDNLGFTEVETPLLFKS 208

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           +PEGAR+FLVP+R  +   YALPQ+PQQYKQLLMASG  RY+Q+A CFRDED R DR P 
Sbjct: 209 TPEGAREFLVPTR-KRNLMYALPQSPQQYKQLLMASGVHRYYQLAKCFRDEDLRQDRQP- 266

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS----------NNFLRICYDDA 282
           EF Q+DMEM+F    D+   +E ++  +F +  N N  +          + F  + + +A
Sbjct: 267 EFTQVDMEMAFANGADVREVVEKLVLKIFADTVNKNIYTLDANENLVQQSTFNPMTFKEA 326

Query: 283 IRRYGTDKPDLRNPIIMHNVTEH 305
           + +YG DKPDLR    + +V+EH
Sbjct: 327 LGKYGIDKPDLRYTCAITDVSEH 349



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 87/182 (47%), Gaps = 15/182 (8%)

Query: 430 NCFEFCWIMDFPFY---------EWNEEEKKIDF-----AHNPFTMPQGGMESLKGNDLL 475
           + F   W++DFP +         E ++   K D+     +H+PFTM       L   D L
Sbjct: 468 DTFVASWVIDFPLFSPSSMDSDPEKSQPFPKFDYTQIVASHHPFTMAVLEDYPLLETDPL 527

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            ++   YDLV NG E+  G  R H S++    F  + +     E  FG L RAF  G PP
Sbjct: 528 KVRGQHYDLVLNGVEVGGGSTRVHDSQLQNYIFKEI-MKIPNSEKLFGHLLRAFDVGCPP 586

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           H G A G DR+V +L G  ++R+V  FP +    D ++GSPS  +  QL    +R+    
Sbjct: 587 HAGFAIGFDRLVAMLAGYSSIRDVIAFPKTVTGADPMIGSPSAATSAQLAPYHVRVAPKE 646

Query: 596 KK 597
            K
Sbjct: 647 NK 648


>gi|294656878|ref|XP_459196.2| DEHA2D16346p [Debaryomyces hansenii CBS767]
 gi|199431809|emb|CAG87367.2| DEHA2D16346p [Debaryomyces hansenii]
          Length = 704

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/314 (34%), Positives = 177/314 (56%), Gaps = 36/314 (11%)

Query: 21  VRLSGWVHRV-RPHGGIIFLDIRDHYG-ITQVVANPD---SACFEIAKSVRSEWVLCIDG 75
           V L+G +H+  R      F ++RD  G ITQ++ +P+   +  F + K   +E  + + G
Sbjct: 74  VTLNGHIHKKPRIMATRSFAELRDSNGDITQILMSPEHTPTKLFNLLKETTTEDSVSVSG 133

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--PESIRFKYRFLDL 133
            V  + A+    N    + EL  Q  +IL+ +  L      + ++  P+ +  ++R+L L
Sbjct: 134 AVQLKQAKAGEEN---KKWELVVQNYQILNHSN-LDAARLDKLKHSSPKDLPPQFRYLQL 189

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           R       +  R+++ N +R   + + +F+E  TP+L  S+PEGAR+FLVP+R +   FY
Sbjct: 190 RTPFYQNALRTRSKVANLIRNIFVEKHDFVEIETPLLFKSTPEGAREFLVPTR-SHDRFY 248

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN- 251
           ALPQ+PQQYKQ+LM+SGF RYFQIA CFRDED R+DR P EF Q+D+EMS++   D +  
Sbjct: 249 ALPQSPQQYKQILMSSGFTRYFQIAKCFRDEDLRADRQP-EFTQIDLEMSYINNSDQVGL 307

Query: 252 TMENVLRGVFE-------------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
            +E+++  ++                    +F + NT++  F ++ Y +A+  YG DKPD
Sbjct: 308 VVEDLIHNIWNKIAMLPTYKVNSDDVLEKIDFEDRNTLA--FSKLNYIEALSNYGIDKPD 365

Query: 293 LRNPIIMHNVTEHF 306
           LR+ +   N+T  F
Sbjct: 366 LRSSLKFKNITTFF 379



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 13/172 (7%)

Query: 435 CWIMDFPFY------EWNEEE------KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            W++DFP +      E N  E       K +  H+PFTM +     L  +D L ++   Y
Sbjct: 525 SWVVDFPLFNPVEISESNNAEFPEYDFTKFESTHHPFTMAKLEDYDLLASDPLKVRGEHY 584

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+  G  R H  ++    F  +   +   E  FG L  A   G PPH G+A G
Sbjct: 585 DLVINGVEVGGGSRRIHDPQLQKYIFEKILKIRNYHE-LFGHLLHALSMGCPPHAGLALG 643

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            DR+  +L+G+ ++R+V  FP +Q+  D ++ SPS V+ + L E  +  + N
Sbjct: 644 FDRLCTMLIGSTSIRDVIAFPKNQSGIDTVVDSPSHVNDKTLNEYHITTIVN 695


>gi|168070936|ref|XP_001786991.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162659993|gb|EDQ48195.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 272

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 149/271 (54%), Gaps = 7/271 (2%)

Query: 323 GYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
           G +V AI  K  G   +R   D + E+ +  G  GLA++  + +E G     GP++K ++
Sbjct: 3   GGQVKAINVKNAGSKYSRKDIDALTEFVKVYGAKGLAWL--KAEEDGL---KGPISKFIS 57

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
               + +   L ++ GD   F+A             R  +A+EL +I+ + F F W+ D+
Sbjct: 58  EAEQKGLEQALAIEAGDLLLFVADKKNVVADALGALRLKLAKELDLIDQSKFNFLWVTDW 117

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +E++EEE +   AH+PFTMPQ     L   +  ++KA  YD+V NG+E+  G +R   
Sbjct: 118 PLFEYDEEEGRFYAAHHPFTMPQRADLELLDTNPKAVKAQAYDIVLNGYELGGGSLRIFE 177

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            E+  + FS +G +KE    +FG L  AF+ G PPHGGIA G+DR++MLL G  N+R+  
Sbjct: 178 KEIQEKMFSLLGFTKEEAYAQFGFLLEAFEYGTPPHGGIAIGLDRLIMLLSGRTNLRDTI 237

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            FP + +   L+  +PS VS  QL +L L +
Sbjct: 238 AFPKTASASCLMTNAPSEVSENQLTDLHLAL 268


>gi|238879131|gb|EEQ42769.1| hypothetical protein CAWG_00990 [Candida albicans WO-1]
          Length = 580

 Score =  167 bits (422), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 115/319 (36%), Positives = 174/319 (54%), Gaps = 38/319 (11%)

Query: 21  VRLSGWVHR---VRPHGGIIFLDIRDHYGI-TQVVANP---DSACFEIAKSVRSEWVLCI 73
           V L+G VHR   +RP  G  FL  RD  G   Q++A P   + + FE+ K +  E  + +
Sbjct: 70  VTLNGHVHRKSRIRPTLGFAFL--RDTNGDEIQLLATPKYTEPSIFELMKKLTVEDSVSV 127

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--PESIRFKYRFL 131
            G +  + +++        Q EL  +  +IL+ +  L      + ++  P+ I  ++R+L
Sbjct: 128 SGFIQPKESKSGKEQ----QWELVVENFQILN-SSNLDAAQLDKLKHNNPQDIPPQFRYL 182

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGS 190
            LR     K++  R+     +R   I  + F+E  TP+L  S+PEGAR+FLVP+R +   
Sbjct: 183 QLRTPYYQKSLRLRSEAARLIRDIFIKNHEFVEIETPLLFKSTPEGAREFLVPTR-SFNK 241

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           FYALPQ+PQQYKQ+LM+SGF RYFQ+A CFRDED RSDR P EF Q+D+EMSFV   D +
Sbjct: 242 FYALPQSPQQYKQILMSSGFTRYFQVAKCFRDEDLRSDRQP-EFTQIDLEMSFVNNSDQV 300

Query: 251 N-TMENVLRGVFEEFSNGNTVSNN------------------FLRICYDDAIRRYGTDKP 291
              +E+V+  V+ +     T   N                  F ++ Y D + +YG DKP
Sbjct: 301 GIVVEDVIHNVWNKVGGKLTYKVNDEGFLVEADLAEVGKSLQFSKLNYIDVLVKYGIDKP 360

Query: 292 DLRNPIIMHNVTEHFVHSE 310
           DLR+ +   ++ + F+  E
Sbjct: 361 DLRSNLSFISLEDFFIAKE 379


>gi|224539962|ref|ZP_03680501.1| hypothetical protein BACCELL_04874 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518416|gb|EEF87521.1| hypothetical protein BACCELL_04874 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 329

 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 162/325 (49%), Gaps = 10/325 (3%)

Query: 267 GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEV 326
           G  +   F R+ + DA++ YG+DKPDLR  +    + +     +F VF     +      
Sbjct: 7   GVELEGQFQRMAWADAMKYYGSDKPDLRFGMKFVELMDILKGHDFSVFDSAEYIG----- 61

Query: 327 WAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE 385
             I A+G     R   D + E+ +         ++ R++E GNV     V K       +
Sbjct: 62  -GICAEGAAHYTRKQLDALTEFVKRPQIGAKGMVYARVEEDGNVKS--SVDKFYTQEVLQ 118

Query: 386 AIRVRLDMQDGDSCFFIAGD-PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYE 444
            ++     + GD    ++GD  +K      + R  +  +LG+ + N F   W++DFP +E
Sbjct: 119 QVKEAFGAKPGDLILILSGDDTMKTRKQLCELRLEMGSQLGLRDKNTFACLWVVDFPMFE 178

Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
           W+E+E ++   H+PFT P+     L   D  +++A  YD+V NG E+  G IR H  ++ 
Sbjct: 179 WSEQENRLMAMHHPFTHPKDEDIDLLDTDPAAVRADAYDMVINGVEVGGGSIRIHDPKLQ 238

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            + F  +G + E  E +FG L  AF+ G PPHGG+A G+DR V L  G  ++R+   FP 
Sbjct: 239 AKMFEILGFTPEKAEEQFGFLMNAFKYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFPK 298

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGL 589
           + +  D+++ +P+ +   QL EL L
Sbjct: 299 NNSGRDVMLDAPAALDPSQLDELNL 323


>gi|47207856|emb|CAF90609.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 323

 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/213 (42%), Positives = 136/213 (63%), Gaps = 15/213 (7%)

Query: 91  TGQIELSAQKIEILSVAEELPLPV------FGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
           TG+IE+ A+ +E+ +V  +LP  V      F   +  ES+R +YR+LDLR   + +N+  
Sbjct: 50  TGEIEVLAESVEVYNVCRKLPFEVKDFVKMFVVGQKSESLRMQYRYLDLRSSRMQRNLRL 109

Query: 145 RTRIINSMR---CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           R++++  MR   C +    F++  TP L   +P GA++F+VPSR   G FY+LPQ+PQQ+
Sbjct: 110 RSQLVMKMREFLCNL--HGFVDVETPTLFKRTPGGAKEFVVPSR-EPGRFYSLPQSPQQF 166

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQLLM +G DRYFQIA C+RDE  + DR P EF Q+D+EMSFVEQ  I++ +E +L+  +
Sbjct: 167 KQLLMVAGIDRYFQIARCYRDEGSKPDRQP-EFTQVDIEMSFVEQTGIMSLVEALLQHSW 225

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            +      +   F  + +++A+R YG DKPD R
Sbjct: 226 PD--QLGPLQLPFQTMTFEEAMRDYGVDKPDTR 256


>gi|321263797|ref|XP_003196616.1| mitochondrial aspartyl-tRNA synthetase; Msd1p [Cryptococcus gattii
           WM276]
 gi|317463093|gb|ADV24829.1| Mitochondrial aspartyl-tRNA synthetase, putative; Msd1p
           [Cryptococcus gattii WM276]
          Length = 694

 Score =  164 bits (415), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 183/367 (49%), Gaps = 45/367 (12%)

Query: 6   THSCGDLGVSDVGSFVRLSGWV-HRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           TH   DL  S V   V ++GW+  + R    + F  +R     + V           AK 
Sbjct: 70  THDIADLSPSLVDQKVVIAGWLFSQRRASDNLHFFTLRSPSSSSAV------QLVSRAKD 123

Query: 65  VRS-------EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           V S       E V+   G V +R  +   A+    +IEL  Q + +L+ A++  LP +  
Sbjct: 124 VSSDMMEYPLESVVLAQGTVRARKQKAKTASSAIDEIELEVQGVTLLNPADQT-LPFYPN 182

Query: 118 RE--YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
           R     E +R ++R+LDLRR  L  N+  R ++ + +R  +  + F E  TPIL  SSPE
Sbjct: 183 RPEVANEDLRAQHRYLDLRRQDLANNLQTRGKVAHIIRNYLYDQGFTEIETPILLNSSPE 242

Query: 176 GARDFLVPSRV-----NQGSFYALPQAPQQYKQLLMASG-FDRYFQIAPCFRDEDPRSDR 229
           GAR+FLVP+R       Q +FYALPQ+PQQ KQLL++SG   +Y+QIA CFRDED R DR
Sbjct: 243 GAREFLVPTRSPSSEGGQPTFYALPQSPQQPKQLLISSGAIPKYYQIAKCFRDEDGRKDR 302

Query: 230 LPGEFYQLDMEMSFV----EQ---------------DDILNTMENVLRGVFEEFSNGNTV 270
            P EF Q+D+EM FV    EQ                ++   +E +++ +++E   G  +
Sbjct: 303 QP-EFTQIDLEMGFVSGAAEQPKGEGQMRSTWAIGGQEVREVVEGMIKKIWKEV-KGVDL 360

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI- 329
              F  + Y+ A+  YG+DKPD R  +    +  +   S+  +   +L  +P    W + 
Sbjct: 361 EGWFRVMPYEVAMDVYGSDKPDTRFEMYTLPIGYYPTLSDNSLDKVLLDQSPYTVEWMVT 420

Query: 330 PAKGGGG 336
           PA    G
Sbjct: 421 PAAQAAG 427



 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 95/177 (53%), Gaps = 19/177 (10%)

Query: 434 FCWIMDFPFYEWNEEEK------KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVC 486
           F WI  FP +   +E+K      +    H+PFT P    +  LK   +  ++   YDLV 
Sbjct: 522 FLWITQFPLFTLADEDKIHLSRGRYSSTHHPFTAPMYEDLADLKAGKVDGVRGQHYDLVL 581

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE------NRFGGLYRAFQCGMPPHGGIA 540
           +G EI  G +R H  +V LQ +    + KEV++      +RF  L RA +CG PPHGG+A
Sbjct: 582 DGQEIGGGSVRIH--DVKLQEW----VMKEVLQLDEQEMSRFDHLLRALKCGAPPHGGLA 635

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G DR+V +L GAK++REV  FP S    D +  SPS    E L+E GL+ ++   K
Sbjct: 636 LGFDRLVAILCGAKSIREVIAFPKSTTGQDPVFKSPSVSGDEVLKEYGLQSLKREDK 692


>gi|207340581|gb|EDZ68888.1| YPL104Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 362

 Score =  163 bits (413), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 111/325 (34%), Positives = 171/325 (52%), Gaps = 44/325 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRV--RPHGGIIFLDIRDHYG-ITQVVANPDS- 56
           + R  T +   L     G  + L+GW+ +   R    +IF  +RD  G I Q+V N    
Sbjct: 30  LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKSLL 89

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F +   V++  +L +   + +  A+         + E+  + I +L+ + + P  +  
Sbjct: 90  KGFTLEDVVQAVGILSLKRKLSNEDAD---------EYEVQLEDITVLNASNKKPAQM-- 138

Query: 117 EREYPESIRF--KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
            +++  S  +  ++R+L LR       + KR+ I   +R      +F E  TP+L  ++P
Sbjct: 139 -QDFKLSAIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNFDFTEVETPMLFKATP 197

Query: 175 EGARDFLVPSRVNQG----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           EGAR+FLVP+R  +     SFYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR 
Sbjct: 198 EGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQ 257

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS------------------NGN-TVS 271
           P EF Q+DMEM+F   +D++  +E  + GV+ +FS                   GN TVS
Sbjct: 258 P-EFTQVDMEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLDSKGTLVPDEKGNGTVS 316

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNP 296
               R+ Y+ A+  YG DKPDLR P
Sbjct: 317 --IFRMTYEQAMTSYGIDKPDLRAP 339


>gi|94263255|ref|ZP_01287071.1| GAD:tRNA synthetase, class II (D, K and N) [delta proteobacterium
           MLMS-1]
 gi|93456338|gb|EAT06462.1| GAD:tRNA synthetase, class II (D, K and N) [delta proteobacterium
           MLMS-1]
          Length = 300

 Score =  163 bits (412), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 98/281 (34%), Positives = 150/281 (53%), Gaps = 7/281 (2%)

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
            +VF  +  V  G  V +I AKG    +R   D +  +A   G  GLA++  ++ E G  
Sbjct: 17  LQVFRDV--VENGGMVKSINAKGCAYFSRKDLDDLTAYAGEFGAKGLAWV--KIKEDGQ- 71

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
               P+AK       +A+   L  Q  D  FF+A  P       A+ R  +A+ L +++ 
Sbjct: 72  -WQSPIAKFFTAEEQQAMVEALAAQPADLLFFVADQPTVVHQALAELRLELARRLELVSR 130

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
             F F W+ DFP  E++ E K+    H+PFT P+     L  +D   +++  YDLV NG 
Sbjct: 131 EDFSFVWVTDFPLLEYDAEAKRHAAVHHPFTAPREEDLPLLDSDPGRVRSRAYDLVLNGN 190

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G IR H  ++  Q F+ +GI+ E V+++F  L +A + G PPHGG+A G+DR++ML
Sbjct: 191 EIGGGSIRIHQPDLQRQVFTALGITPEEVKDKFAFLVQALELGAPPHGGMAFGLDRLLML 250

Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           L G  ++R+V  FP +Q     L  +P+ V+ +QL EL LR
Sbjct: 251 LAGCDSIRDVIAFPKTQKATCPLTEAPAPVARKQLTELSLR 291


>gi|325989663|ref|YP_004249362.1| aspartyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574748|emb|CBZ40404.1| Aspartyl-tRNA synthetase [Mycoplasma suis]
          Length = 543

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 24/294 (8%)

Query: 14  VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           +SD+G      V + G++  VR    I+FL IRD  G  QVV        E+    R   
Sbjct: 11  ISDLGIIPNQKVVIGGFIETVRKLKDIVFLVIRDGSGKIQVVFPKK----EVELPPREST 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKY 128
           VL I+G        T +    + ++E+  +++E+ S ++   P+ +  E+   E  R KY
Sbjct: 67  VL-IEG--------TTSQKKNSEELEILGERMEVFSTSKPSFPIDLNEEKMSEEKYRMKY 117

Query: 129 RFLDLRRDTLHKNI--VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           R+LDLRR +LHKNI    + + I S     +  NF E +TPIL+  S EGA  F     V
Sbjct: 118 RYLDLRRSSLHKNIEFCSKAKFIASSYLHSL--NFREITTPILSFPSREGAETFKTEENV 175

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           N    + L Q+PQ YKQLLM +GF++YFQ A  FR E  R DR   EF QLD+EMSF  Q
Sbjct: 176 NVNRSFTLAQSPQIYKQLLMIAGFEKYFQFATSFRAEKMREDR-QYEFSQLDIEMSFSTQ 234

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-NPIIM 299
           + +   +E +L  + ++    +     F RI + +A  +YGTDKPDLR +P I+
Sbjct: 235 EKLFAIIEKLLISLIKKLVKSDFPDLPFRRISFQEAFEKYGTDKPDLRFSPYIV 288



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/134 (44%), Positives = 82/134 (61%), Gaps = 3/134 (2%)

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
           N F   WI D+P++E + E K +  +H+PFT+P    +SL  ++LL  K+  YDLV NG 
Sbjct: 398 NNFSLVWITDWPYFEESLEGKLVT-SHHPFTLPTK--DSLSKDNLLDWKSHGYDLVLNGV 454

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EIASGG R + S++  + FS +G S E +   FG    A   G+PPH GIA G DR++  
Sbjct: 455 EIASGGQRIYNSDLQAKIFSILGYSSEEINQEFGWFLEALNYGVPPHLGIAIGWDRLMSE 514

Query: 550 LLGAKNVREVSLFP 563
           LL  K++REV  FP
Sbjct: 515 LLNLKSIREVIAFP 528


>gi|260201700|ref|ZP_05769191.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289444109|ref|ZP_06433853.1| predicted protein [Mycobacterium tuberculosis T46]
 gi|289417028|gb|EFD14268.1| predicted protein [Mycobacterium tuberculosis T46]
          Length = 294

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 146/304 (48%), Gaps = 24/304 (7%)

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYIFWRLD 364
           F  + FRVF           V A+   GG    R   D   +WA+ +G  GLAY+   + 
Sbjct: 1   FSDTTFRVFQAPY-------VGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAYVL--VA 51

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G + G  PVAK+L       +   +  + GD  FF AG      +    AR  IA  L
Sbjct: 52  EDGTLGG--PVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARVEIANRL 109

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKI----------DFAHNPFTMPQGGMESLKGNDL 474
           G+I+ + + F W++D P +E  +E                 H+ FT P+   E    +D 
Sbjct: 110 GLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWEDRIESDT 169

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S+ A  YD+VCNG EI  G +R H  ++  + F+ +G+ K   E +FG L  AF  G P
Sbjct: 170 GSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEAEEKFGFLLEAFMFGAP 229

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DR   LL G  ++REV  FP +    D L  +P+ ++ +Q +E G  I   
Sbjct: 230 PHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESG--IDAQ 287

Query: 595 PKKI 598
           PK++
Sbjct: 288 PKRV 291


>gi|325973220|ref|YP_004250284.1| aspartyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651822|gb|ADX97904.1| aspartyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 543

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 107/294 (36%), Positives = 156/294 (53%), Gaps = 24/294 (8%)

Query: 14  VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           +SD+G      V + G++  VR    I+FL IRD  G  QVV        E+    R   
Sbjct: 11  ISDLGIIPNQKVVIGGFIETVRKLKDIVFLVIRDGSGKIQVVFPKK----EVELPPREST 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKY 128
           VL I+G        T +    + ++E+  +++E+ S ++   P+ +  E+   E  R KY
Sbjct: 67  VL-IEG--------TTSQKKNSEELEILGERMEVFSTSKPSFPIDLNEEKMSEEKYRMKY 117

Query: 129 RFLDLRRDTLHKNI--VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           R+LDLRR  LH NI    + + I S    ++  NF E +TPIL+  S EGA  F     V
Sbjct: 118 RYLDLRRSALHNNIEFCSKAKFIASSYLHIL--NFREITTPILSFPSREGAETFKTEENV 175

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           N    + L Q+PQ YKQLLM +GF++YFQ A  FR E  R DR   EF QLD+EMSF  Q
Sbjct: 176 NVNRSFTLAQSPQIYKQLLMIAGFEKYFQFATSFRAEKMREDR-QYEFSQLDIEMSFSTQ 234

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-NPIIM 299
           + +   +E ++  + ++    +     F RI + +A  +YGTDKPDLR +P I+
Sbjct: 235 EKLFAIIEKLIISLIKKLVKSDFPDLPFRRISFQEAFEKYGTDKPDLRFSPYIV 288



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/134 (44%), Positives = 82/134 (61%), Gaps = 3/134 (2%)

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
           N F   WI D+P++E + E K +  +H+PFT+P    +SL  ++LL  K+  YDLV NG 
Sbjct: 398 NNFSLVWITDWPYFEESLEGKLVT-SHHPFTLPTK--DSLSKDNLLDWKSHGYDLVLNGV 454

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EIASGG R + S++  + FS +G S E +   FG    A   G+PPH GIA G DR++  
Sbjct: 455 EIASGGQRIYNSDLQAKIFSILGYSSEEINQEFGWFLEALNYGVPPHLGIAIGWDRLMSE 514

Query: 550 LLGAKNVREVSLFP 563
           LL  K++REV  FP
Sbjct: 515 LLNLKSIREVIAFP 528


>gi|207109586|ref|ZP_03243748.1| aspartyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 175

 Score =  153 bits (387), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 77/176 (43%), Positives = 111/176 (63%), Gaps = 1/176 (0%)

Query: 46  GITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105
           G+ Q+V +P S  +E A  VRSE+VL   G V  R     N  + TG+IE+  +++ I +
Sbjct: 1   GLVQLVCDPSSKAYEKALEVRSEFVLVAKGRVRLRGPGLENPKLKTGKIEIVLEELVIEN 60

Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
            +   P+ + G +   E +R KYR+LDLR    ++    R+ +    R  +  + F+E  
Sbjct: 61  KSATPPIEI-GNKNVNEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNTLAQKGFLEIE 119

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           TPIL+ ++PEGARD+LVPSRV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFR
Sbjct: 120 TPILSKTTPEGARDYLVPSRVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFR 175


>gi|213584164|ref|ZP_03365990.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 173

 Score =  153 bits (387), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 76/175 (43%), Positives = 115/175 (65%), Gaps = 3/175 (1%)

Query: 31  RPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRSAETINANI 89
           R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G V +R A+ +NA++
Sbjct: 1   RDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARDAKNVNADM 60

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRII 149
            TG+IE+ A  + I++ A+ LPL         E  R KYR+LDLRR  + + +  R +I 
Sbjct: 61  ATGEIEVLASSLTIINRADSLPLD--ANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKIT 118

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQL
Sbjct: 119 SLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQL 173


>gi|47207855|emb|CAF90608.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 664

 Score =  153 bits (387), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 100/282 (35%), Positives = 153/282 (54%), Gaps = 16/282 (5%)

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G FY+LPQ+PQQ+KQLLM +G DRYFQIA C+RDE  + DR P EF Q+D+EMSFVEQ  
Sbjct: 181 GQFYSLPQSPQQFKQLLMVAGIDRYFQIARCYRDEGSKPDRQP-EFTQVDIEMSFVEQTG 239

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I++ +E +L+  + +      +   F  + +++A+R YG DKPD R  + +  + + F+ 
Sbjct: 240 IMSLVEALLQHSWPD--QLGPLQLPFQTMTFEEAMRDYGVDKPDTRFAMKLVELRDVFLS 297

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRA--FCDRMNEWARSQGQPGLAYIFWRLDES 366
           ++ +     LS  PG  V AI   GG  +      + + E A +Q    L+ +  +L E 
Sbjct: 298 TDVQFVRAALS-QPGGSVQAIRVPGGMKHLTGRHLNTLRETAATQFGQELSLV--QLRED 354

Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG- 425
           G +  + P+ K L+   TE +  R     GD     AG      S     R   A+ L  
Sbjct: 355 GTL--ISPLKKLLSPETTEELLQRTGSGPGDLLLIAAGSLDTVRSMLGHLRLKCAELLES 412

Query: 426 ----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMP 462
               + + + F F W++DFP +  +EEE +K++ AH+PFT P
Sbjct: 413 CGALVRDPSVFHFLWVLDFPLFLASEEEVEKLESAHHPFTAP 454



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           + + + F F W++DFP +  +EEE +K++ AH+PFT P      L   +   ++   YDL
Sbjct: 21  VRDPSVFHFLWVLDFPLFLASEEEAEKLESAHHPFTAPLPEDAHLLYTEPQKVRGQHYDL 80

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNV 511
           V NG E+  G IR H +        N+
Sbjct: 81  VLNGCEVGGGSIRIHKASEQHHVLKNI 107


>gi|289674667|ref|ZP_06495557.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 258

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 138/260 (53%), Gaps = 5/260 (1%)

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           R+  D   ++    G  GLAYI       G      P+ K +   N   I  R+   DGD
Sbjct: 1   RSQIDDYTKFVSIYGAKGLAYIKVNERAKGPEGLQSPIVKFIPEDNLNVILDRVGAVDGD 60

Query: 398 SCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
             FF A D  K  S A  A R  I  +L +  C  +   W++DFP +E N++       H
Sbjct: 61  IVFFGA-DKFKIVSEALGALRIKIGNDLKLHTCE-WAPMWVVDFPMFEENDD-GSFTALH 117

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +PFT P+   E L+ N   ++ +  YD+V NG E+  G IR H  E+    F  +GI+++
Sbjct: 118 HPFTAPKCTPEELEANPATAL-SRAYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAED 176

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
             + +FG L  A + G PPHGG+A G+DR+VML+ GA+++REV  FP +Q+  D++  +P
Sbjct: 177 EQQEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAP 236

Query: 577 STVSVEQLRELGLRIVENPK 596
             V  + LREL +R+ E PK
Sbjct: 237 GVVDAKALRELHIRLREQPK 256


>gi|33322965|gb|AAQ07219.1|AF496527_1 aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp. lactis]
          Length = 140

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 71/138 (51%), Positives = 93/138 (67%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
           +E+ A +I +L+ A+  P  +  +    E  R KYR+LDLRR TL   ++ R +I+ +  
Sbjct: 1   VEVIASEITVLNKAKTPPFEIKDDLVASEQTRLKYRYLDLRRPTLQNALIMRAQIMTATN 60

Query: 154 CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
             +  E FI   TP L  S+PEGARD+LVPSRV  GSFYALPQ+PQ +KQLLM +GFD+Y
Sbjct: 61  AYLSGEGFINIETPDLGKSTPEGARDYLVPSRVYPGSFYALPQSPQIFKQLLMGAGFDKY 120

Query: 214 FQIAPCFRDEDPRSDRLP 231
           +QIA CFRDED R DR P
Sbjct: 121 YQIARCFRDEDLRGDRQP 138


>gi|331001293|ref|ZP_08324919.1| GAD domain protein [Parasutterella excrementihominis YIT 11859]
 gi|329569020|gb|EGG50816.1| GAD domain protein [Parasutterella excrementihominis YIT 11859]
          Length = 277

 Score =  150 bits (379), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 139/265 (52%), Gaps = 6/265 (2%)

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           R+  D   E+ +  G  GLAYI     ++G      P+ K+L+    +AI  R   QDGD
Sbjct: 13  RSEIDGYTEFVKIYGAKGLAYIKVNDIKAGREGLQSPIVKNLSDDVLKAIIERTGAQDGD 72

Query: 398 SCFFIAG-DPLKFCSFAA----DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
             FF A    + F S  A       +   +  G+     +   W++DFP +E++EEE++ 
Sbjct: 73  VIFFGADRKKIVFDSLGALRLKVGHSGFGKSHGLFE-EGWRPLWVIDFPMFEYDEEEERW 131

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
              H+PFT P+ G E     D  +  A  YD+V NG+EI  G IR H ++V  + F+ + 
Sbjct: 132 VACHHPFTSPKDGDEDKLVTDPENCFAKAYDMVLNGWEIGGGSIRIHKADVQSKVFNALK 191

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
           I  E    +FG L    Q G PPHGG+A G+DRIV ++ GA ++R+V  FP +Q    LL
Sbjct: 192 IGPEEARAKFGFLLDVLQYGAPPHGGLAFGLDRIVTMMCGADSIRDVIAFPKTQRAQCLL 251

Query: 573 MGSPSTVSVEQLRELGLRIVENPKK 597
             +PS V  +QLREL +R+    KK
Sbjct: 252 TQAPSPVDEKQLRELHIRLRNEHKK 276


>gi|284162109|ref|YP_003400732.1| aspartyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284012106|gb|ADB58059.1| aspartyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 432

 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 162/321 (50%), Gaps = 36/321 (11%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSA 57
           M R  T   GD    DVG  + L GWVH +R  GG+IF+ +RD  G  QV        + 
Sbjct: 1   MQRKWTSEIGD---EDVGKDILLYGWVHEIRDLGGLIFIILRDREGFIQVTLPKKKVPAE 57

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            FE+AK ++ E V+ + G V           +I        ++IE+L+ AE +PLP+   
Sbjct: 58  TFELAKKLKRESVIKVVGTVKKEPKAPQGYEVI-------PKEIEVLNEAE-VPLPLEVT 109

Query: 118 REYPESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
            + P  +  R  +RFLDLR+  +      R +++ S+R  +    FIE +TP + +++ E
Sbjct: 110 EKVPAELDTRLDHRFLDLRKPKIQAIFRIRHQMLQSVRAFLCEHGFIEVNTPKIVSTATE 169

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           G  +    S   + +F  L Q+PQ YKQ+LM++GF+R F+I P FR E+  + R   E  
Sbjct: 170 GGTELFPISYFEKEAF--LNQSPQLYKQILMSAGFERVFEIGPIFRAEEHNTTRHLNEAI 227

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
            +D+EMSF + + ++  +E ++  V+E+                +  S  F R+ YD+A+
Sbjct: 228 SIDIEMSFTDHEGVMKILEELIVRVYEDVVENCEKFLNWLNLKLDIPSLPFERVTYDEAL 287

Query: 284 ---RRYGTDKP---DLRNPII 298
              R+ G + P   DL  P +
Sbjct: 288 EIARKKGEEIPWGEDLTTPAL 308



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E+ASG  R H  ++++++    G++ E     F     AF+ GMPPH G   
Sbjct: 347 FDLMKGPLELASGTQRIHKYDMLVESIKAKGLNPE----SFEFYLEAFRYGMPPHAGWGL 402

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R++M +L  KN+RE  LFP  ++
Sbjct: 403 GAERLLMSMLNLKNIREAVLFPRDRH 428


>gi|256028558|ref|ZP_05442392.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766478|ref|ZP_06525856.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289718033|gb|EFD82045.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 283

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 140/263 (53%), Gaps = 21/263 (7%)

Query: 337 NRAFCDRMNEWARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
           +R F     E+ ++  G  GLAYI  +L   G  +   P+AK L+    +AI  +   + 
Sbjct: 28  SRKFISEYEEYVKTYFGAKGLAYI--KLTADGITS---PIAKFLSEDEMKAIIEKTQAKT 82

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
           GD  F +A       S     R  I ++L +IN + F+F W++DFP ++++EEE++    
Sbjct: 83  GDVIFIVADKRKVVVSALGALRLKIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAE 142

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQ--------YDLVCNGFEIASGGIRNHMSEVMLQA 507
           H+PFT       S+K  DL    A Q        YDLV NG EI  G IR    ++    
Sbjct: 143 HHPFT-------SIKAEDLDKFLAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPKIQSMV 195

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           F  +G+S+E  + +FG    AF+ G PPHGG+A GIDR +M++L  +++R+V  FP +  
Sbjct: 196 FDRLGLSQEEAKAKFGFFLDAFKYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFPKTNK 255

Query: 568 FCDLLMGSPSTVSVEQLRELGLR 590
              L+  +P+TV  +QL EL ++
Sbjct: 256 GQCLMTEAPNTVDEKQLEELFIK 278


>gi|300814717|ref|ZP_07094967.1| aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511190|gb|EFK38440.1| aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 197

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 72/197 (36%), Positives = 117/197 (59%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D    +AG          + RN IA++L +I+ N +E  WI DFP +E++E+EK+    H
Sbjct: 1   DLILIVAGKDQVVYDSLGNLRNKIARDLDLIDKNSYEMLWITDFPLFEYDEDEKRYVAKH 60

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +PFT P+     +  ++    +A  YD+V NG E+  G IR +  E+  + F  +G + E
Sbjct: 61  HPFTSPKDEDLDIILSNPEKARAKAYDIVINGDEMGGGSIRINDQEIQKKMFKALGFTDE 120

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
             + +FG L  AF+ G PPHGG+A G+DR+ ML  GA+N+R+V  FP +Q+   LL  +P
Sbjct: 121 DAKEKFGFLLEAFKYGAPPHGGLAYGLDRLTMLFTGAENIRDVIAFPKTQSATCLLTEAP 180

Query: 577 STVSVEQLRELGLRIVE 593
           + +S +QL E+ ++++E
Sbjct: 181 TELSEKQLEEVHIKVIE 197


>gi|261403378|ref|YP_003247602.1| aspartyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261370371|gb|ACX73120.1| aspartyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 434

 Score =  147 bits (371), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 150/300 (50%), Gaps = 27/300 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M   RTH   ++     G  V + GWVH +R  G IIF+ +RD  G  Q+VA       E
Sbjct: 1   MKWRRTHYSAEIKPEMDGQEVVIMGWVHSIRALGKIIFVILRDREGTVQIVAPKQKVGEE 60

Query: 61  IAKSVR---SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           + K ++   +E V+ I G V++      N     G  E+   ++E+L+ A+  PLP+   
Sbjct: 61  LFKQIKKLGAEDVVAIKGKVIA------NEKAPNG-FEILPLELEVLNTAQR-PLPLDPA 112

Query: 118 REYPESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
            + P  +  R + RFLDLRR  +      R+ ++ S+R  +  E FIE +TP L AS  E
Sbjct: 113 EKVPAELDTRLENRFLDLRRPKVQAVFKIRSEMLKSVRNTLYNEGFIEVNTPKLVASCTE 172

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           G  +    S   + +F  L Q+PQ YKQ+LMASG DR F+IAP FR E+  + R   E  
Sbjct: 173 GGTELFPISYFEKEAF--LGQSPQLYKQMLMASGLDRVFEIAPIFRAEEHNTRRHLNEAT 230

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT------------VSNNFLRICYDDAI 283
            +D+EM+F +  D ++ +E V+   F +                   S  F RI YD+AI
Sbjct: 231 SIDIEMAFADDKDAMDILEKVVYNAFLDVYENRKREIDVLGIEFELPSKKFDRITYDEAI 290



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI+SG  R H+ +++++     G++     + F     AF+ GMPPH G   
Sbjct: 349 FDLMYKDLEISSGAQRIHLYDLLVENIKKKGLNP----DGFTYYLEAFKYGMPPHAGWGL 404

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G DR  M+L   +N+RE  LFP
Sbjct: 405 GADRFTMILTQQENIRECVLFP 426


>gi|303244759|ref|ZP_07331089.1| aspartyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302484893|gb|EFL47827.1| aspartyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 438

 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 144/296 (48%), Gaps = 27/296 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61
           RTH   ++     G  + + GW H +R  G ++F+ +RD  G  Q+V          F  
Sbjct: 9   RTHFSNEITPEMDGEEIIVMGWTHSIRKLGKLVFIILRDREGTVQIVVPKQKVSEEVFTT 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AKSV  E V+ I G V++         II  +I        IL+ AE  PLP+    + P
Sbjct: 69  AKSVGREDVIAIKGKVVANEKAPAGFEIIPVEIR-------ILNKAE-TPLPLDPSEKVP 120

Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             I  R   RFLDLRR  +      R+ ++ S+R       FIE +TP L AS+ EG  +
Sbjct: 121 ADIDTRLDRRFLDLRRPKIQALFRLRSEMLKSVRDTFYNNGFIEVNTPKLVASATEGGTE 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S  ++ +F  L Q+PQ YKQ++MA+GFDR F+I P FR E+  + R   E   +D 
Sbjct: 181 LFPISYFDREAF--LGQSPQLYKQMMMAAGFDRVFEIGPIFRAEEHNTRRHLNEAISIDC 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAI 283
           EMSF ++ D +N +ENV+  VF +              N N     F R+ Y +A+
Sbjct: 239 EMSFSDEKDAMNVLENVVHNVFVDLYENNQKELRTLDINLNVQETPFPRVTYTEAV 294



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI+SG  RNH  +++++    +G++ E     FG    AF+ GMPPH G   
Sbjct: 353 FDLMYKDLEISSGAQRNHKYDLLVEGIKRMGLNPE----GFGTYLEAFKYGMPPHAGWGM 408

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R +M++   +N+RE  LFP
Sbjct: 409 GAERFMMIITCQENIRECVLFP 430


>gi|312136815|ref|YP_004004152.1| aspartyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224534|gb|ADP77390.1| aspartyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 438

 Score =  143 bits (361), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 143/296 (48%), Gaps = 23/296 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           + RTH   ++     G  V L GWVH +R  GGI+FL +RD  GI QV A       E+ 
Sbjct: 7   KKRTHYSDEITPDMDGKKVSLVGWVHEIRDLGGIVFLLLRDREGIIQVTAPSKKVDKELM 66

Query: 63  KSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             +R    E V+ ++G V   S    N  II    E+      I    + LPL   G+ +
Sbjct: 67  DKMRKSGKESVIFVEGTVKESSKAPNNVEIIPTNFEI------INKSKQPLPLDTTGKVK 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   RFLDLR+  ++     R +++NS+R       FIE +TP L AS+ EG   
Sbjct: 121 AELDTRLDARFLDLRKLNVNAIFKIRNKMLNSVRKFFEENGFIEINTPKLVASATEGGTA 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               +   + +F  L Q+PQ YKQ++MA+GF++ ++I P FR E+  + R   E   +D+
Sbjct: 181 LFPVTYFEREAF--LGQSPQLYKQMMMAAGFEKVYEIGPIFRAEEHDTLRHLNEAISIDI 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           E+SF   +D++  +EN++  V E+ +                    F RI YD+ I
Sbjct: 239 EVSFANHEDVMKILENLIVRVIEDLNKSCKKELKILNKKLEVPETPFERITYDEVI 294



 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 4/86 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K + +DL+    EI+SG +R H  +++++      ++ E     F     AF+ GMPPH 
Sbjct: 349 KCYAFDLMYKDLEISSGAMRIHDHDLLVKRIKEQDLNPE----SFKYYLDAFKYGMPPHA 404

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G +R +M L G KN+RE  LFP
Sbjct: 405 GWGLGAERFMMALTGVKNIRETILFP 430


>gi|171687687|ref|XP_001908784.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943805|emb|CAP69457.1| unnamed protein product [Podospora anserina S mat+]
          Length = 481

 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/205 (42%), Positives = 117/205 (57%), Gaps = 33/205 (16%)

Query: 129 RFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R L +R D  L   I  R +I + +R  +   NF E  TPIL  S+PEGAR+FLVP+R  
Sbjct: 204 RHLQIRFDEALQARIRARPKIGHELRKSLTDLNFTEVETPILFKSTPEGAREFLVPTR-R 262

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
            G  YALPQ+PQQYKQ+LM+SG   Y+Q A CFRDED R+DR P EF QLD+EMSF    
Sbjct: 263 AGLAYALPQSPQQYKQILMSSGIRGYYQFARCFRDEDLRADRQP-EFTQLDLEMSFATGQ 321

Query: 248 DILNTMENVLRGVFE------EFSNGNT----------------------VSNN-FLRIC 278
           D++ T+E++++ + +      E    +T                      VS+  F RI 
Sbjct: 322 DVMRTVESIMKDLMKSLNSQFELVQSDTKERYPVPRRTPPSSDPSSNPWPVSDKPFPRIT 381

Query: 279 YDDAIRRYGTDKPDLRNPI-IMHNV 302
           Y++A+ R+G DKPD R P  I  NV
Sbjct: 382 YEEAMSRFGVDKPDTRIPFEITPNV 406


>gi|15669750|ref|NP_248563.1| aspartyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2500972|sp|Q58950|SYD_METJA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|1592183|gb|AAB99575.1| aspartyl-tRNA synthetase (aspS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 438

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 147/300 (49%), Gaps = 27/300 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--- 57
           M   RTH   D+     G  V + GWVH +R  G IIF+ +RD  G  Q+VA        
Sbjct: 5   MKWRRTHYSADIKPEMDGQEVIIMGWVHSIRALGKIIFVILRDREGTVQIVAPKQKVGDE 64

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F   K + +E V+ + G V++      N     G  E+   ++E+++ A+  PLP+   
Sbjct: 65  LFSQIKKLGAEDVIAVKGKVIA------NEKAPNG-FEILPLELEVINTAKR-PLPLDPA 116

Query: 118 REYPESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
            + P  +  R + RFLDLRR  +      R+ ++ S+R  +  E FIE +TP L AS  E
Sbjct: 117 EKVPAELDTRLENRFLDLRRPKVQAIFKIRSEMLKSVRNTLYNEGFIEVNTPKLVASCTE 176

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           G  +    S   + +F  L Q+PQ YKQ+LMA+G DR F+IAP FR E+  + R   E  
Sbjct: 177 GGTELFPISYFEREAF--LGQSPQLYKQMLMATGLDRVFEIAPIFRAEEHNTRRHLNEAT 234

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAI 283
            +D+EM+F +  D ++ +E V+   F +                      F RI YD+AI
Sbjct: 235 SIDIEMAFADDKDAMDILEKVVYNAFVDVYENRKKEIETLGIEFELPPEKFDRITYDEAI 294



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI+SG  R H+ +++++     G++     + F     AF+ GMPPH G   
Sbjct: 353 FDLMYKDLEISSGAQRIHLYDLLVENIKKKGLNP----DGFTYYLEAFKYGMPPHAGWGL 408

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G DR  M+L   +N+RE  LFP
Sbjct: 409 GADRFTMVLTQQENIRECVLFP 430


>gi|11498525|ref|NP_069753.1| aspartyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3122883|sp|O29342|SYD_ARCFU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2649677|gb|AAB90318.1| aspartyl-tRNA synthetase (aspS) [Archaeoglobus fulgidus DSM 4304]
          Length = 430

 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 146/282 (51%), Gaps = 27/282 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCID 74
           G  V L GWVH VR  GG++F+ +RD  GI Q+           F++AK +R E V+ + 
Sbjct: 14  GQKVTLYGWVHEVRDLGGLVFILLRDREGIVQITLPRKFVSKQVFKLAKKIRRESVIAVT 73

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLD 132
           G       E        G +E+  + IE+L+ A+  PLP+    + P  +  R  +RF+D
Sbjct: 74  G-------EVRREEKAPGGVEIIPESIEVLNEAD-APLPLEVTEKVPAELDTRLDHRFMD 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LRR  +      R +++ S+R  +  E FIE  TP + +++ EG  +    S   + +F 
Sbjct: 126 LRRPRVQAIFRIRHQVMQSVREFLSEEGFIEVHTPKIVSTATEGGTELFPISYFEKEAF- 184

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+PQ YKQ+LMA+GF++ F+I P FR E+  + R   E   +D+EMSF + + +++ 
Sbjct: 185 -LNQSPQLYKQVLMAAGFEKVFEIGPIFRAEEHNTTRHLNEAISIDIEMSFTDHNGVMDV 243

Query: 253 MENVLRGVFEEFSNG------------NTVSNNFLRICYDDA 282
           +E +++ V+E+ +                    F RI YD+A
Sbjct: 244 LERLVQRVYEDVAEKCERYLGWLEVSLEIPELPFPRITYDEA 285



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E++SG  R H+ ++++++    G+  E     FG    AF+ GMPPH G   
Sbjct: 345 FDLMHGWLELSSGAQRIHLYDMLVESIKAKGMEPE----SFGFYLEAFRYGMPPHAGWGL 400

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R++M +LG KNVRE  LFP  ++
Sbjct: 401 GAERLIMSMLGLKNVREAVLFPRDRH 426


>gi|256811422|ref|YP_003128791.1| aspartyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256794622|gb|ACV25291.1| aspartyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 434

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 144/297 (48%), Gaps = 21/297 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M   RTH   ++     G  V + GWVH +R  G IIF+ +RD  G+ Q+VA       E
Sbjct: 1   MKWKRTHYSANIKPEMDGEEVVIMGWVHSIRALGKIIFVILRDREGMVQIVAPKQKVGDE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +   ++    L  + ++  R     N     G  E+   ++E+L+ A+  PLP+    + 
Sbjct: 61  LFSQIKK---LGAEDVIAVRGKVVANEKAPNG-FEILPLELEVLNTAQR-PLPLDPAEKV 115

Query: 121 PESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           P  +  R + RFLDLRR  +      R+ ++ S+R  +  E FIE +TP L AS  EG  
Sbjct: 116 PAELDTRLENRFLDLRRPKIQAIFKIRSEMLRSVRKTLYEEGFIEVNTPKLVASCTEGGT 175

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +    S   + +F  L Q+PQ YKQ+LMA+G DR F+IAP FR E+  + R   E   +D
Sbjct: 176 ELFPISYFEREAF--LGQSPQLYKQMLMATGLDRVFEIAPIFRAEEHNTRRHLNEATSID 233

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAI 283
           +EM+F +  D +  +E V+   F +                      F RI YD+AI
Sbjct: 234 IEMAFADDKDAMEMLEKVVYNAFLDVYENRKREIETLGIEFELPPEKFDRITYDEAI 290



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI+SG  R H+ +++++     G++     + F     AF+ GMPPH G   
Sbjct: 349 FDLMYKDLEISSGAQRIHLYDLLVENIKKKGLNP----DGFTYYLEAFKYGMPPHAGWGL 404

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G DR  M+L   +N+RE  LFP
Sbjct: 405 GADRFTMVLTQQENIRECVLFP 426


>gi|84488964|ref|YP_447196.1| aspartyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|97196728|sp|Q2NHT0|SYD_METST RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|84372283|gb|ABC56553.1| AspS [Methanosphaera stadtmanae DSM 3091]
          Length = 439

 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 141/266 (53%), Gaps = 13/266 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   ++G    G  V+++GWVH +R  GGI+F+ IRD  GITQ+ A       E+   
Sbjct: 10  RTHYSNEIGPELAGETVKVTGWVHEIRDLGGIVFVLIRDKNGITQLTAPSKKLSEEMMAD 69

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           VR+   E ++ + G V   SA+  N       +E+    I++++V++  LPL    + E 
Sbjct: 70  VRAARKETIITLTGTV-QESAKAPNG------VEIIPSNIDVINVSQLPLPLDTTEKVEA 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RF+DLR+  +      +++++++ R      +F E +TP L AS+ EG  + 
Sbjct: 123 EMDTRLDSRFMDLRKHDVSAIFKIKSQMLHTARNYFYDNDFTEITTPKLVASATEGGTEL 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F  L Q+PQ YKQ++MA+G D  F+I   FR E+  + R   E   +D E
Sbjct: 183 FPITYFEKEAF--LGQSPQLYKQMMMATGLDNVFEIGQIFRAEEHDTLRHLNEALSIDAE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSN 266
           MSF  Q D +NT+E +++ +  + S 
Sbjct: 241 MSFKSQTDAMNTLEELIKRILSDIST 266



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 4/86 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K+  +DL+    E++SG  R H  +++         +K++  + F    +AF+ GMPPH 
Sbjct: 350 KSTAFDLMYRDLELSSGAQRIHDYDLLYSQIE----AKDLNPDSFEKYLQAFKYGMPPHS 405

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G DR+ M++ GAKN+RE  LFP
Sbjct: 406 GWGMGADRLTMVITGAKNIRETVLFP 431


>gi|296109648|ref|YP_003616597.1| aspartyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295434462|gb|ADG13633.1| aspartyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 431

 Score =  141 bits (355), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 151/296 (51%), Gaps = 27/296 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH   ++     G  V ++GWVH +R  G IIF+ +RD  G  Q+ A     +   F+ 
Sbjct: 4   RTHYSSEITPQMDGEEVIVAGWVHSIRALGKIIFVILRDREGTVQITAPKQKVEEGVFKT 63

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            KS+  E V+ + G V++      N     G  E+   ++E+L+ AE  PLP+    + P
Sbjct: 64  IKSLGVEDVIAVKGKVVA------NEKAPNG-FEIIPIEVEVLNRAER-PLPLDPAEKVP 115

Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R + RFLDLR+  +      R  ++ S+R    +E FIE +TP L AS+ EG  +
Sbjct: 116 AELDTRLENRFLDLRKPRVQAIFKIRHEMLKSVRETFYSEGFIEVNTPKLVASATEGGTE 175

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S   + +F  L Q+PQ YKQ+LMASG DR F+IAP FR E+  + R   E   +D+
Sbjct: 176 LFPISYFEKEAF--LGQSPQLYKQMLMASGLDRVFEIAPIFRAEEHNTRRHLNEATSIDI 233

Query: 240 EMSFVEQDDILNTMENVLR----GVFEEFSNGNTVSNN--------FLRICYDDAI 283
           EM+F +  D +  +E V+      V+E       + N+        F +I YD+AI
Sbjct: 234 EMAFADDKDAIKMLEKVVYNACVSVYENREKELNLLNHKLEVPPKSFDKITYDEAI 289



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI+SG  R H+ ++++++  N G++ +     F     AF+ GMPPH G   
Sbjct: 346 FDLMYKDLEISSGAQRIHIYDMLVESIKNKGLNPDA----FTYYLEAFKYGMPPHAGWGL 401

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G DR  M+L G +N+RE  LFP  ++
Sbjct: 402 GADRFTMVLTGQENIRECVLFPRDRH 427


>gi|254994348|ref|ZP_05276538.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 197

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 71/177 (40%), Positives = 101/177 (57%)

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           RN + +EL +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   
Sbjct: 17  RNKLGKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSK 76

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + A  YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPH
Sbjct: 77  VMAEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPH 136

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GGIA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+
Sbjct: 137 GGIALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVK 193


>gi|291336620|gb|ADD96166.1| hypothetical protein [uncultured organism MedDCM-OCT-S05-C185]
          Length = 134

 Score =  140 bits (354), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 68/114 (59%), Positives = 89/114 (78%), Gaps = 1/114 (0%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           M SGFDRYFQIAPCFRDED R+DR PGEFYQLD+EMSFVEQ+D+ + +E VL GVFEEF+
Sbjct: 1   MMSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDLEMSFVEQEDVFSEIEPVLAGVFEEFT 60

Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
              +V   F RI + +A+ +YGTDKPDLR  I + +V++ F +SEF +F+K ++
Sbjct: 61  TW-SVPQPFPRIPFSEAMLKYGTDKPDLRIAIEICDVSDLFENSEFAIFAKTVA 113


>gi|313637748|gb|EFS03107.1| aspartyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 182

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 70/177 (39%), Positives = 100/177 (56%)

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           RN + +EL ++N     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   
Sbjct: 2   RNKLGKELDLVNEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSK 61

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + A  YD+V NG+EI  G +R +  EV    F  +G + E    +FG L  A + G PPH
Sbjct: 62  VMAEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDEAASEQFGFLMEALEYGTPPH 121

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GGIA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+
Sbjct: 122 GGIALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLATVK 178


>gi|289192215|ref|YP_003458156.1| aspartyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288938665|gb|ADC69420.1| aspartyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 434

 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 147/300 (49%), Gaps = 27/300 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--- 57
           M   RTH   ++     G  V + GWVH +R  G IIF+ +RD  G  Q+VA        
Sbjct: 1   MKWRRTHYSAEITPEMDGEEVIVMGWVHSIRALGKIIFVILRDREGTVQIVAPKQKVGDE 60

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F   K + +E V+ + G V++      N     G  E+   ++EI++ A+  PLP+   
Sbjct: 61  LFSQIKKLGAEDVIAVRGKVIA------NEKAPNG-FEILPLELEIINTAKR-PLPLDPA 112

Query: 118 REYPESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
            + P  +  R + RFLDLRR  +      R+ ++ S+R  +  E FIE +TP L AS  E
Sbjct: 113 EKVPAELDTRLENRFLDLRRPKVQAIFKIRSEMLKSVRNTLYNEGFIEVNTPKLVASCTE 172

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           G  +    S   + +F  L Q+PQ YKQ+LMA+G DR F+IAP FR E+  + R   E  
Sbjct: 173 GGTELFPISYFEREAF--LGQSPQLYKQMLMATGLDRVFEIAPIFRAEEHNTRRHLNEAT 230

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAI 283
            +D+EM+F +  D ++ +E V+   F +                      F RI YD+AI
Sbjct: 231 SIDIEMAFADDKDAMDILEKVVYNAFVDVYENRKKEIETLGIEFELPPEKFDRITYDEAI 290



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI+SG  R H+ +++++     G++     + F     AF+ GMPPH G   
Sbjct: 349 FDLMYKDLEISSGAQRIHLYDLLVENIKKKGLNP----DGFTYYLEAFKYGMPPHAGWGL 404

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G DR  M+L   +N+RE  LFP
Sbjct: 405 GADRFTMVLTQQENIRECVLFP 426


>gi|222874567|gb|EEF11698.1| predicted protein [Populus trichocarpa]
          Length = 166

 Score =  140 bits (353), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 68/160 (42%), Positives = 98/160 (61%), Gaps = 1/160 (0%)

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           W++DFP +E +EE  +    H+PFT P+ G E L   D  +  A  YD+V NG+E+  G 
Sbjct: 2   WVVDFPMFEHDEENDRWAAVHHPFTSPKDGHEELMVTDPANCLAKAYDMVLNGWELGGGS 61

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           +R H ++V  + F  + IS E    +FG L  A Q G PPHGG+A G+DR++ L+ GA +
Sbjct: 62  VRIHRADVQSKVFDALKISPEDARAKFGYLLDALQYGAPPHGGLAFGLDRLITLMTGADS 121

Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           +R+V  FP +Q   DLL  +PS V  +QLREL +R+  NP
Sbjct: 122 IRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRL-RNP 160


>gi|315230515|ref|YP_004070951.1| aspartyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183543|gb|ADT83728.1| aspartyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 438

 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 137/259 (52%), Gaps = 14/259 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH    +     G  V+++GWV+ ++  GGI FL IRD  GI QV A       EI K
Sbjct: 2   YRTHYSSQITEELNGQRVKVAGWVYEIKDLGGIKFLWIRDREGIVQVTAPKKKVSEEIFK 61

Query: 64  ---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119
               + SE V+ ++G+V       +   II        +K+E+LS AE  LPL   G+ +
Sbjct: 62  LIPKLNSEDVVAVEGMVNFTPKAKLGFEII-------PEKLEVLSKAETPLPLDPTGKVK 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   RF+DLR+  +      R+ +  ++R     E FIE  TP + A++ EG  +
Sbjct: 115 AELDTRLDNRFIDLRKPEVMAIFKIRSNVFKAVREFFYNEGFIEIHTPKIIATATEGGTE 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + +F A  Q+PQ YKQ++MASG DR F+IAP FR E+  + R   E + +D 
Sbjct: 175 LFPMKYFEKDAFLA--QSPQLYKQIMMASGLDRVFEIAPIFRAEEHNTTRHLNEAWSIDA 232

Query: 240 EMSFVE-QDDILNTMENVL 257
           E++F+E +D+++  +E ++
Sbjct: 233 EIAFIEDEDEVMQVLERLV 251



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL   G EI SGG R H  E++ Q  +  G++ E     F    +AF+ GMPPHGG   
Sbjct: 353 FDLEYRGVEITSGGQREHRYEILKQQIAEKGLNVE----SFEFYLKAFRYGMPPHGGFGL 408

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++  +L   N+REV LFP
Sbjct: 409 GAERLIKQMLNLGNIREVILFP 430


>gi|289811373|ref|ZP_06542002.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 142

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 68/136 (50%), Positives = 94/136 (69%), Gaps = 3/136 (2%)

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+
Sbjct: 1   YLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDV 59

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ +
Sbjct: 60  ETSFMTAPQVREVMEALVRHLWLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMEL 117

Query: 300 HNVTEHFVHSEFRVFS 315
            +V +     EF VF+
Sbjct: 118 VDVADLLKSVEFAVFA 133


>gi|242398426|ref|YP_002993850.1| Aspartyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242264819|gb|ACS89501.1| Aspartyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 438

 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 136/259 (52%), Gaps = 14/259 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60
           YRTH  G +        +R++GWVH V+  GGI FL IRD  GI QV A         F 
Sbjct: 2   YRTHYSGQITEELNNQKIRVAGWVHEVKDLGGIKFLWIRDREGIVQVTAPKKKVSEEVFN 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119
           +  S+ +E V+ ++G+V       +         EL  +KI +LS AE  LPL   G+ +
Sbjct: 62  LIPSLHNEDVVSVEGIVNFTPKARLG-------FELIPEKIILLSKAETPLPLDPTGKVK 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   RF+DLRR  +      R+    ++R     E F+E  TP + A++ EG  +
Sbjct: 115 AELDTRLDNRFMDLRRPEIMAIFKIRSSTFRAVRDFFHNEGFVEIHTPKIIATATEGGTE 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + +F A  Q+PQ YKQ++MASG DR F+IAP FR E+  + R   E + +D 
Sbjct: 175 LFPMKYFEKDAFLA--QSPQLYKQIMMASGLDRVFEIAPIFRAEEHNTTRHLNEAWSIDG 232

Query: 240 EMSFVE-QDDILNTMENVL 257
           EM+F+E +D+++  +E+++
Sbjct: 233 EMAFIEDEDEVMKLLEHLI 251



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL   G EI SGG R H  E +    +  G++ E     F    +AF+ GMPPHGG   
Sbjct: 353 FDLEYRGIEITSGGQREHRYEKLKAQIAEQGLNVE----SFDFYLKAFRYGMPPHGGFGL 408

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++  +L   N+REV LFP
Sbjct: 409 GAERLIKQMLNLGNIREVMLFP 430


>gi|16081991|ref|NP_394405.1| aspartyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|13878780|sp|Q9HJM1|SYD_THEAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|10640261|emb|CAC12075.1| aspartyl-tRNA synthetase related protein [Thermoplasma acidophilum]
          Length = 428

 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/246 (34%), Positives = 129/246 (52%), Gaps = 10/246 (4%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ V + GW+   R    I FL IRD+ G  Q     D A  +I K +  E ++ +DG V
Sbjct: 15  GAKVVVYGWMQEARIMKNISFLMIRDNTGTIQATFKNDEATLDIIKRINRESIVRVDGSV 74

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136
             +S       I    IE+S   I I++ AE  LPLPV    +     R   RF+DLR+ 
Sbjct: 75  NKKS-------ISKAGIEISGTSISIVNEAEAPLPLPVVDPVQADLETRLNSRFMDLRKR 127

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +       + ++  +R  + ++ FIE  TP + A++ EG  D L P R  +   Y L Q
Sbjct: 128 NISAIFRIESALLWGIRQYLHSQKFIEVHTPKIVAAATEGGSD-LFPVRYFEKDAY-LNQ 185

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ YK++LM++GFDR F++ P FR E+  + R   EF  +D+EMSF + +D +  +EN 
Sbjct: 186 SPQLYKEVLMSAGFDRVFEVGPAFRAEEHNTTRHLNEFTSIDIEMSFADHNDAMAMLENA 245

Query: 257 LRGVFE 262
           +R   E
Sbjct: 246 IRSGIE 251



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL     E+ SG  R H  ++++Q F+     K++    F     AF+ GMPPH G   
Sbjct: 343 FDLQYREIEVTSGAQRVHDPKMLIQRFN----EKKLDVKSFQFYVDAFKYGMPPHAGWGL 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ M+LLG  N+RE +LFP
Sbjct: 399 GLERLTMILLGLNNIRETTLFP 420


>gi|15678254|ref|NP_275369.1| aspartyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3122882|sp|O26328|SYD_METTH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2621273|gb|AAB84732.1| aspartyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 437

 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 156/296 (52%), Gaps = 27/296 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVH +R  GGIIF+ +RD  G+ Q+ A       ++ KS
Sbjct: 8   RTHYSKDIEPEMDGDEVTVMGWVHEIRDLGGIIFVLLRDRDGLIQITAPSKKIEKDLFKS 67

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +R    E V+   G V         +    G  E+    +++L+++++ PLP+    +  
Sbjct: 68  IRKLKKESVVAFGGTVQ-------ESGKAPGGFEIIPSFLKVLNISKQ-PLPLDPTEKVK 119

Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             I  R   RFLDLR+ ++      ++R+++S+R  +  + F+E +TP L AS+ EG  +
Sbjct: 120 AEIDTRLDARFLDLRKPSVSAIFKIKSRMLHSVRVFLEEQGFLEINTPKLVASATEGGTE 179

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               +   + +F  L Q+PQ YKQ++M++G DR ++IAP FR E+  + R   E   +D+
Sbjct: 180 LFPITYFEREAF--LGQSPQLYKQIMMSTGLDRVYEIAPIFRAEEHDTLRHLNEVISIDI 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSN---------GNTV---SNNFLRICYDDAI 283
           E SFV+ +D++  +EN++  V E+ +          G T+      F R+ YD+A+
Sbjct: 238 EASFVDHEDVMKILENLVVRVIEDVNEHCTDALETLGRTLEVPETPFERLEYDEAV 293



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 4/86 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           ++  +DL+    EI+SG +R H  +++++     G++ +  E+       AF+ GMPPH 
Sbjct: 348 RSHAFDLMYRDLEISSGAMRVHQHDLLVEKIKRQGLNPDSFESYLS----AFEYGMPPHA 403

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G +R  M L G KN+RE  LFP
Sbjct: 404 GWGLGAERFNMTLTGLKNIRETVLFP 429


>gi|150400467|ref|YP_001324233.1| aspartyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|166225356|sp|A6USZ9|SYD_META3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150013170|gb|ABR55621.1| aspartyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 438

 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 134/269 (49%), Gaps = 15/269 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61
           RTH   ++     G  + + GW H +R  G ++F+ +RD  G  Q+VA         F  
Sbjct: 9   RTHYSSEVNSEMDGQEIIIMGWNHSIRKLGKLVFIILRDREGTIQIVAPKQKVSEETFAT 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AKS+  E V+ I G V++         +I  +I+       IL+ A+  PLP+    +  
Sbjct: 69  AKSLGKEDVMAIKGKVVANEKAPAGFEVIPIEIK-------ILNKAD-TPLPLDPSEKVS 120

Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             I  R   RFLDLRR  +      R+ ++ S+R       FI+  TP L AS+ EG  +
Sbjct: 121 ADIDTRLDKRFLDLRRPKIQSLFKLRSEVLKSIRNTFHDNGFIDVDTPKLVASATEGGTE 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S  ++ +F  L Q+PQ YKQ++MA+GFDR F+I P FR E+  + R   E   +D 
Sbjct: 181 LFPISYFDKEAF--LGQSPQLYKQMMMAAGFDRVFEIGPIFRAEEHNTRRHLNEAISIDC 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           EMSF ++ D +  +E V+   F +  N N
Sbjct: 239 EMSFADEKDAMEILEKVINNAFTDIYNNN 267



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI+SG  RNH  +++++    +G++ E     FG    AF+ GMPPH G   
Sbjct: 353 FDLMYKDLEISSGAQRNHKYDLLVEGIKRMGLNPE----GFGTYLEAFKYGMPPHSGWGV 408

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           GI+R++M++   +N+RE  LFP
Sbjct: 409 GIERLMMIMACQQNIRECVLFP 430


>gi|330835726|ref|YP_004410454.1| aspartyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329567865|gb|AEB95970.1| aspartyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 429

 Score =  137 bits (344), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 146/293 (49%), Gaps = 25/293 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   ++     G  V L+GWVH VR  GG  F+ +RD  GI QVV    S  FE+AK 
Sbjct: 3   RTHFVKEITPDLDGKPVTLAGWVHNVRDLGGKKFILLRDKSGIGQVVVEKSSPPFELAKE 62

Query: 65  VRSEWVLCIDGLVMS-RSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122
           +  E V+ + G+V S R A           +E+S   ++ILS A+  LPL V  + +   
Sbjct: 63  LSQESVIQVQGIVKSDRRA--------PNGVEVSCTDLKILSKAKSPLPLDVSDKVKADI 114

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R K R LDLRR  +   I  ++  + + R  +    F E  TP + A+  EG      
Sbjct: 115 EVRLKERLLDLRRQEMQAMIRIQSTAVKTFREVLYKNGFYEIFTPKIIATGTEGGAQLFP 174

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                + +F A  Q+PQ YK+LL AS  +R F+IAP +R E+  +     EF  +D+EM+
Sbjct: 175 VIYFGKEAFLA--QSPQLYKELL-ASAVERVFEIAPAWRAEESDTPYHLAEFVSMDVEMA 231

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAI 283
           F + +D++N +E ++  V +  +  N            ++S    R+ Y +A+
Sbjct: 232 FADYNDVMNVVEEIMVNVLQNVAKHNQEDLAILGHRLPSISRPIKRVTYREAL 284



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E+ SG  RN+  EV+       G++       F    + F  G+PPH G   
Sbjct: 344 FDLIYRWLELVSGSSRNNTREVLESELRARGLNP----VSFEFFLKWFDYGIPPHAGFGM 399

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+ R +++L G ++V+EVSLFP
Sbjct: 400 GLQRFMLMLTGLQSVKEVSLFP 421


>gi|327400136|ref|YP_004340975.1| aspartyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327315644|gb|AEA46260.1| aspartyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 430

 Score =  136 bits (343), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 148/292 (50%), Gaps = 27/292 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSV 65
             ++G  DVG  V L GW+H VR HGG++F+ +RD  G  Q+       D   F  AK V
Sbjct: 5   TSEIGEEDVGKEVTLYGWIHEVRDHGGLVFVILRDREGFIQITLPKKKVDREIFNRAKKV 64

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI- 124
           R E V+ + G+V +            G  E+     ++L+ A+  PLP+    + P  + 
Sbjct: 65  RRESVVMVKGIVKAEPK-------APGGYEVIPTAFDVLNEAD-APLPLDVAEKVPAELD 116

Query: 125 -RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R+LDLR+  +      R  ++ S+R  +  E FIE +TP + +++ EG  +    
Sbjct: 117 TRLDHRYLDLRKPKIQAIFRIRHCMLQSVRRFLCEEGFIEVNTPKIVSTATEGGTELFPI 176

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           S   + +F  L Q+PQ YKQ+LM +G ++ F+I P FR E+  + R   E   +D+E SF
Sbjct: 177 SYFEKEAF--LNQSPQLYKQVLMGAGLEKVFEIGPIFRAEEHNTVRHLNEAISIDIEASF 234

Query: 244 VEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAI 283
           ++ + +++ +E ++  ++E+ S              +     F R+ YD+AI
Sbjct: 235 MDHEGVMDVLERLVARIYEDVSVECEKFLSWLDIKLDVPEVPFERLKYDEAI 286



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E+ASG  R H+ +++++     G+S E     FG    AF+ GMPPH G   
Sbjct: 345 FDLMHGWLELASGAQRIHLYDLLVKRIEECGMSPE----SFGFYLEAFRYGMPPHAGWGL 400

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R++M +LG KN+RE  +FP  ++
Sbjct: 401 GAERLLMSMLGLKNIREAIMFPRDRH 426


>gi|150399675|ref|YP_001323442.1| aspartyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|166225362|sp|A6UQQ8|SYD_METVS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150012378|gb|ABR54830.1| aspartyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 438

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 143/296 (48%), Gaps = 27/296 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH    +     G  V L GWVH +R  G + F+ +RD  G+ Q+V      D   FE+
Sbjct: 9   RTHYSEQVIPEMDGQEVILMGWVHSIRALGKLAFIILRDREGLIQMVVPKQKVDEETFEL 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK +  E V+ I G V++      N     G  E+   +I IL+ A+  PLP+    + P
Sbjct: 69  AKKLGKEDVITIRGKVVA------NEKAPKG-FEVIPMEIRILNKAD-APLPLDPSEKVP 120

Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             I  R   RFLD+RR  +      R+ ++ S+R     E FIE +TP L AS+ EG  +
Sbjct: 121 AEIDTRLDRRFLDIRRPKIQAIFKIRSEMLKSIRKTFSEEGFIEVNTPKLVASATEGGTE 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S   + +F  L Q+PQ YKQ++MA GFD+ F+IA  FR E+  + R   E   +D 
Sbjct: 181 LFPISYFEKEAF--LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDT 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAI 283
           EMSFV + D +  +E V+   + +              N       F ++ Y +A+
Sbjct: 239 EMSFVNEKDAMAMLEKVVHNCYTDIEYNRPSEIETLELNFEIPEKTFPKVTYSEAV 294



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 6/92 (6%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND    KAF  DL+    EI+SG  R H  + ++Q  +  G++     + F     AF+ 
Sbjct: 345 NDNKICKAF--DLMYKELEISSGAQRIHKYDSLVQNIAKRGMNP----DSFETYLEAFRY 398

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPPH G   G DR  M+L   +N+RE  LFP
Sbjct: 399 GMPPHAGWGLGADRFTMILTNQENIRECVLFP 430


>gi|325959112|ref|YP_004290578.1| aspartyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325330544|gb|ADZ09606.1| aspartyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 439

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 142/258 (55%), Gaps = 15/258 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH    +        V + GW+H +R  GGIIF+ +RD  G+TQV A     +   FE 
Sbjct: 10  RTHYSKQIKPEMKDEDVVIMGWIHEMRDLGGIIFVLLRDRDGVTQVTAPSKKIEPELFEE 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K ++ E V+ + G    R  E+  A    G +E+  + I++LS ++ LPLP+    +  
Sbjct: 70  LKKLKKESVIAVKG----RVQESAKA---PGGVEIIPETIKLLSESK-LPLPLDTTEKVR 121

Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             I  R   RF+DLR+ ++      ++R+++S+R  + +EN+ E +TP L  S+ EG  +
Sbjct: 122 AEIDTRLDSRFIDLRKHSVSAIFKVKSRMLHSVRNFLESENYTEINTPKLVGSATEGGTE 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               +   + +F  L Q+PQ YKQ++MASGFD  ++IAP FR E+  + R   E   +D+
Sbjct: 182 LFPITYFEREAF--LGQSPQLYKQMMMASGFDNVYEIAPIFRAEEHDTLRHLNEVISIDV 239

Query: 240 EMSFVEQDDILNTMENVL 257
           E +F +Q D +N +E ++
Sbjct: 240 ETAFTDQIDAMNILEKMV 257



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 4/86 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K+  +DL+    EI+SG +R H  +++++   + G++     + F     AF+ GMPPH 
Sbjct: 350 KSCAFDLMYKDLEISSGAMRIHNHDLLVEKIKSKGLNP----DSFNRYLAAFEYGMPPHA 405

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G +R  M + G  N+RE  LFP
Sbjct: 406 GWGVGAERFTMTMTGQTNIRETVLFP 431


>gi|254168902|ref|ZP_04875742.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622166|gb|EDY34741.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 428

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 150/304 (49%), Gaps = 29/304 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH+  +    D G  V++ GW+H +R  G I F+ +RD YG  Q+    +      F+ 
Sbjct: 3   RTHTTKEAAQLD-GEEVKVCGWIHDIRVLGKIAFIILRDRYGFAQLTLIRSIVGKEKFKE 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREY 120
              +  E V+C  G V       +   I+        ++IE+L+ AE  LPL V  +   
Sbjct: 62  YTKLTRESVICARGKVQKTKQAKLGFEIL-------PEEIEVLNRAESPLPLGVADKVSA 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R + RFLDLR+  +      R+ I+  +R  ++ +NF+E  TP + A++ EG  + 
Sbjct: 115 DLETRIENRFLDLRKREVLAVFEIRSTILQGIREYLLNQNFVEVHTPKIVATATEGGTE- 173

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           L P +  +   Y L Q+PQ YKQ+LMA+G DR  ++AP FR E+  + R   EF  +D+E
Sbjct: 174 LFPVKYFEKDAY-LNQSPQLYKQVLMAAGLDRVLEVAPAFRAEEHNTTRHLNEFISIDIE 232

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDA---IRR 285
           MSF ++ D ++ +E  +    ++              N    S  F RI YDDA   +R+
Sbjct: 233 MSFADEADAMHMLEGSIVNAIKKLKEERKEEMEILGINWEVPSLPFKRITYDDALEIVRK 292

Query: 286 YGTD 289
            G D
Sbjct: 293 KGID 296



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI SG  RNH+ E +++   + G++ E     F    RAF+ GMPPH G   
Sbjct: 343 FDLMYGEREITSGAQRNHVYESLIEVMRSKGLNPE----NFEYYLRAFRYGMPPHAGWGL 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM++ G KN+RE  +FP
Sbjct: 399 GLERLVMIITGVKNIRECVIFP 420


>gi|213580156|ref|ZP_03361982.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 260

 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 126/259 (48%), Gaps = 1/259 (0%)

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           R   D    + +  G  GLAYI       G      PVAK L     EAI  R   QDGD
Sbjct: 1   RKQIDDYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVAKFLTADIVEAILERTGAQDGD 60

Query: 398 SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN 457
             FF A +           R  + ++L + + + +   W++DFP +E ++ E  +   H+
Sbjct: 61  MIFFGADNKKVVADALGALRLKLGKDLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHH 119

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           PFT P+    S          A  YD+V NG+E+  G +R H  E+    F  +GI+++ 
Sbjct: 120 PFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQE 179

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
              +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+  +PS
Sbjct: 180 QREKFGFLLDALKYGTPPHVGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPS 239

Query: 578 TVSVEQLRELGLRIVENPK 596
             +   L ELG+++V+  +
Sbjct: 240 FANQAALTELGIQVVKKAE 258


>gi|45359179|ref|NP_988736.1| aspartyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|62287566|sp|Q6LWU0|SYD_METMP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|45048054|emb|CAF31172.1| Aspartyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 438

 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 144/296 (48%), Gaps = 27/296 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH   D+     G  V L GWVH +R  G + F+ +RD  G  Q V      D   FEI
Sbjct: 9   RTHYSKDVIPEMDGQEVTLMGWVHSIRALGKLAFVILRDRAGTIQAVVPKQKVDEETFEI 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK +  E ++ I G V++      N     G  E+   +I +L+ A+  PLP+    +  
Sbjct: 69  AKKLGKEDIVAIKGKVVA------NEKAPKG-FEVIPIEIRVLNKAD-APLPLDPSEKVS 120

Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             I  R   RFLD+RR  +      R+ ++ S+R     E FIE +TP L AS+ EG  +
Sbjct: 121 AEIDTRLDKRFLDIRRPKIQAIFKIRSEMLKSIRKTFADEGFIEVNTPKLVASATEGGTE 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S   + +F  L Q+PQ YKQ++MA GFD+ F+IA  FR E+  + R   E   +D 
Sbjct: 181 LFPISYFEKEAF--LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDS 238

Query: 240 EMSFVEQDDILNTMENVLRGVFE--EFSNGNTV----------SNNFLRICYDDAI 283
           EMSFV + D +  +E V+   +   E++  N +             F ++ Y +AI
Sbjct: 239 EMSFVNEKDAMAMLEKVVYNCYSDIEYNRPNEIELLELNWEIPEKTFDKVTYTEAI 294



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI+SG  R H  ++++Q  SN+G++     + F     AF+ GMPPH G   
Sbjct: 353 FDLMYKELEISSGAQRVHKYDLLVQNISNMGLNP----DSFETYLEAFKYGMPPHAGWGL 408

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G DR  M+L    N+RE  LFP
Sbjct: 409 GADRFAMVLTAQDNIRECVLFP 430


>gi|254166888|ref|ZP_04873742.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596142|ref|YP_003482838.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624498|gb|EDY37059.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289533929|gb|ADD08276.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 428

 Score =  135 bits (339), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 150/304 (49%), Gaps = 29/304 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           RTH+  +    D G  V++ GW+H +R  G I F+ +RD YG  Q+    +      F+ 
Sbjct: 3   RTHTTKEAAQLD-GEEVKVCGWIHDIRVLGKIAFIILRDRYGFAQLTLIRSIVGKEKFKE 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREY 120
              +  E V+C  G V       +   I+        ++IE+L+ AE  LPL V  +   
Sbjct: 62  YTKLTRESVICAKGKVQKTKQAKLGFEIL-------PEEIEVLNRAESPLPLGVADKVSA 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R + RFLDLR+  +      R+ I+  +R  ++ +NF+E  TP + A++ EG  + 
Sbjct: 115 DLETRIENRFLDLRKREVLAVFEIRSTILQGIREYLLNQNFVEVHTPKIVATATEGGTE- 173

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           L P +  +   Y L Q+PQ YKQ+LMA+G DR  ++AP FR E+  + R   EF  +D+E
Sbjct: 174 LFPVKYFEKDAY-LNQSPQLYKQVLMAAGLDRVLEVAPAFRAEEHNTTRHLNEFISIDIE 232

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDA---IRR 285
           MSF +++D +  +E  +    ++              N    S  F RI YD+A   +R+
Sbjct: 233 MSFADEEDAMYMLEGSIVNAIKKLKEERKEEMEILGMNWEVPSLPFKRITYDEALEIVRK 292

Query: 286 YGTD 289
            G D
Sbjct: 293 KGID 296



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI SG  RNH+ E +++   + G++ E     F    RAF+ GMPPH G   
Sbjct: 343 FDLMYGEREITSGAQRNHVYESLVEVMRSKGLNPE----NFEYYLRAFRYGMPPHAGWGL 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM++ G KN+RE  +FP
Sbjct: 399 GLERLVMIITGVKNIRECVIFP 420


>gi|159905438|ref|YP_001549100.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|238686962|sp|A9A945|SYD_METM6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|159886931|gb|ABX01868.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 438

 Score =  135 bits (339), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 142/296 (47%), Gaps = 27/296 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH   ++     G  V L GWVH +R  G + F+ +RD  G  Q V      D   FEI
Sbjct: 9   RTHYSEEVIPEMDGQEVILMGWVHSIRALGKLAFVILRDREGTIQAVVPKQKVDEETFEI 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK +  E ++ I G V++      N     G  E+   +I +L+ A+  PLP+    + P
Sbjct: 69  AKKLGKEDIIAIRGKVVA------NEKAPKG-FEVIPIEIRVLNKAD-APLPLDPSEKVP 120

Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             I  R   RFLD+RR  +      R+ ++ S+R     E FIE +TP L AS+ EG  +
Sbjct: 121 AEIDTRLDKRFLDIRRPKIQAIFKIRSEMLRSIRKTFADEGFIEVNTPKLVASATEGGTE 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S   + +F  L Q+PQ YKQ++MA GFD+ F+IA  FR E+  + R   E   +D 
Sbjct: 181 LFPISYFEKEAF--LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAVSIDT 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAI 283
           EMSFV + D +  +E V+   + +              N       F ++ Y +AI
Sbjct: 239 EMSFVNEKDAMAMLEKVVYNCYADIEYNRPQEIELLELNWEVPEKTFDKVTYTEAI 294



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI+SG  R H  +++++  SN+G++     + F     AF+ GMPPH G   
Sbjct: 353 FDLMYKELEISSGAQRVHKYDLLVENISNMGMNP----DSFETYLEAFKFGMPPHAGWGL 408

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G DR  M+L    N+RE  LFP
Sbjct: 409 GADRFAMVLTAQDNIRECVLFP 430


>gi|23006060|ref|ZP_00048561.1| COG0173: Aspartyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 192

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 63/110 (57%), Positives = 80/110 (72%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  SDVG  VRLSGW HR+R HGG++F+D+RDHYG+TQ V + DS  F+
Sbjct: 1   MHRYRTHTCGALRPSDVGGEVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVIDSDSKAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
            A++VRSEWV+ IDG V +R A T NA + TG  E+    +E+L  A EL
Sbjct: 61  EAEAVRSEWVIRIDGRVRTRPAGTENAELPTGADEVYIDDLEVLGPAGEL 110


>gi|207109199|ref|ZP_03243361.1| aspartyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 219

 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 120/227 (52%), Gaps = 13/227 (5%)

Query: 326 VWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVN 383
           + A+  KG     +R+    + E+ R  G  GLAY+  + DE       GP+ K L+   
Sbjct: 3   IKALNVKGADALFSRSTLKELEEFVRQFGAQGLAYLQIKEDEI-----KGPLVKFLSEKG 57

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFY 443
            + I  R + Q GD  FF AGD      +    R  +A+ L +I+ +   F W+++FP +
Sbjct: 58  LKNILERTNAQVGDIVFFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMF 117

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E  + E     AH+PFTMP+    +++  D+  ++A  YD+V NG E+  G IR H  ++
Sbjct: 118 E--KTENGYHAAHHPFTMPK----NIECEDMEEVEAHAYDVVLNGVELGGGSIRIHKEKM 171

Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
             + F  + I++E  + +FG L  A + G PPHGG A G DR++ML+
Sbjct: 172 QKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLM 218


>gi|150402788|ref|YP_001330082.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|166225359|sp|A6VHK5|SYD_METM7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150033818|gb|ABR65931.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 438

 Score =  134 bits (336), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 142/296 (47%), Gaps = 27/296 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH   ++     G  V L GWVH +R  G + F+ +RD  G  Q V      D   FEI
Sbjct: 9   RTHYSEEVIPEMDGQEVILMGWVHSIRALGKLAFVILRDREGTIQAVVPKQKVDEETFEI 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK +  E ++ I G V++      N     G  E+   +I +L+ A+  PLP+    + P
Sbjct: 69  AKKLGKEDIIAIRGKVVA------NEKAPKG-FEVIPIEIRVLNKAD-APLPLDPSEKVP 120

Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             I  R   RFLD+RR  +      R+ ++ S+R     E F+E +TP L AS+ EG  +
Sbjct: 121 AEIDTRLDKRFLDIRRPKIQAIFKIRSEMLRSIRKTFADEGFVEVNTPKLVASATEGGTE 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S   + +F  L Q+PQ YKQ++MA GFD+ F+IA  FR E+  + R   E   +D 
Sbjct: 181 LFPISYFEKEAF--LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAVSIDT 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAI 283
           EMSFV + D +  +E V+   + +              N       F ++ Y +AI
Sbjct: 239 EMSFVNEKDAMAMLEKVVYNCYADIEYNRPQEIELLELNWEIPEKTFDKLTYTEAI 294



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 6/92 (6%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND    KAF  DL+    EI+SG  R H  +++++  SN+G++     + F     AF+ 
Sbjct: 345 NDNKVCKAF--DLMYKELEISSGAQRVHKYDLLVENISNMGMNP----DSFETYLEAFKF 398

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPPH G   G DR  M+L    N+RE  LFP
Sbjct: 399 GMPPHAGWGLGADRFAMVLTAQDNIRECVLFP 430


>gi|146302990|ref|YP_001190306.1| aspartyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|145701240|gb|ABP94382.1| aspartyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 429

 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 145/292 (49%), Gaps = 23/292 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V L+GWVH VR  GG  F+ +RD  GI QVV +  S  FE+AK 
Sbjct: 3   RTHFIQDVTPDLDGKEVVLAGWVHNVRDLGGKKFILLRDKSGIGQVVVDKTSPSFEVAKE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPES 123
           +  E  + I G V    A+    N     +E+S  ++ ILS A+  LPL V  + +    
Sbjct: 63  LSQESAIQIKGTV---KADKRAPN----GVEVSCSELRILSKAKAPLPLDVSDKVKADIE 115

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K R LDLRR  +   I  ++  + + R  +    F E  TP + A+  EG       
Sbjct: 116 VRLKERLLDLRRQEMQAMIRIQSTAVRTFRETLYKHGFYEIFTPKIIATGTEGGAQLFPV 175

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + +F A  Q+PQ YK+LL A   +R F++AP +R E+  +     EF  +D+EM+F
Sbjct: 176 IYFGKEAFLA--QSPQLYKELL-AGAVERVFEVAPAWRAEESDTPYHLAEFISMDVEMAF 232

Query: 244 VEQDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAI 283
            + +D++  +E+V+  V E  +  +            +++    R+ Y++AI
Sbjct: 233 ADYNDVMKIVEDVIANVLENVARNHQNDLAILNHRLPSITRPIKRVTYEEAI 284



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DLV    E+ SG  RNH  EV+ +     G++       F    + F  G+PPH G   
Sbjct: 344 FDLVYRWLELVSGSSRNHTREVLERELRARGLNP----INFEFFLKWFDYGIPPHAGFGM 399

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+ R +++L G ++V+EVSLFP  + 
Sbjct: 400 GLQRFMLMLTGLQSVKEVSLFPRDKK 425


>gi|2129413|pir||JC4352 aspartate-tRNA ligase (EC 6.1.1.12) - Pyrococcus sp
 gi|1136773|dbj|BAA08115.1| aspartyl-tRNA synthetase [Pyrococcus sp.]
          Length = 438

 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 148/301 (49%), Gaps = 26/301 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60
           YRTH   ++     G  V+++GWV  V+  GGI FL IRD  GI Q+ A     D   F+
Sbjct: 2   YRTHYSSEITEELNGQKVKVAGWVWEVKDLGGIKFLWIRDRDGIVQITAPKKKVDPELFK 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119
           +   +RSE V+ ++G+V       +   I+        +KI +L+ AE  LPL   G+ +
Sbjct: 62  LIPKLRSEDVVAVEGVVNFTPKAKLGFEIL-------PEKIVVLNRAETPLPLDPTGKVK 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   RF+DLRR  +      R+ +  ++R       FIE  TP + A++ EG  +
Sbjct: 115 AELDTRLDNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATEGGTE 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + +F A  Q+PQ YKQ++MASG DR ++IAP FR E+  + R   E + +D 
Sbjct: 175 LFPMKYFEEDAFLA--QSPQLYKQIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSIDS 232

Query: 240 EMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFL------------RICYDDAIRRY 286
           EM+F+E ++++++ +E ++          N    + L            R+ YD A+   
Sbjct: 233 EMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDILNFELEEPKLPFPRVSYDKALEIL 292

Query: 287 G 287
           G
Sbjct: 293 G 293



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL   G EI+SGG R H  +++++     G++ E     F    +AF+ GMPPHGG   
Sbjct: 353 FDLEYRGVEISSGGQREHRHDILVEQIKEKGLNPE----SFEFYLKAFRYGMPPHGGFGL 408

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++  +L   N+REV LFP
Sbjct: 409 GAERVIKQMLDLPNIREVILFP 430


>gi|57640427|ref|YP_182905.1| aspartyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|62296800|sp|Q52428|SYD_PYRKO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|302148834|pdb|3NEL|A Chain A, Aspartyl-Trna Synthetase Complexed With Aspartic Acid
 gi|302148835|pdb|3NEL|B Chain B, Aspartyl-Trna Synthetase Complexed With Aspartic Acid
 gi|302148836|pdb|3NEM|A Chain A, Aspartyl-Trna Synthetase Complexed With Aspartyl Adenylate
 gi|302148837|pdb|3NEM|B Chain B, Aspartyl-Trna Synthetase Complexed With Aspartyl Adenylate
 gi|302148838|pdb|3NEN|A Chain A, Unliganded Aspartyl-Trna Synthetase From Thermococcus
           Kodakarensis
 gi|302148839|pdb|3NEN|B Chain B, Unliganded Aspartyl-Trna Synthetase From Thermococcus
           Kodakarensis
 gi|57158751|dbj|BAD84681.1| aspartyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 438

 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 148/301 (49%), Gaps = 26/301 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60
           YRTH   ++     G  V+++GWV  V+  GGI FL IRD  GI Q+ A     D   F+
Sbjct: 2   YRTHYSSEITEELNGQKVKVAGWVWEVKDLGGIKFLWIRDRDGIVQITAPKKKVDPELFK 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119
           +   +RSE V+ ++G+V       +   I+        +KI +L+ AE  LPL   G+ +
Sbjct: 62  LIPKLRSEDVVAVEGVVNFTPKAKLGFEIL-------PEKIVVLNRAETPLPLDPTGKVK 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   RF+DLRR  +      R+ +  ++R       FIE  TP + A++ EG  +
Sbjct: 115 AELDTRLDNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATEGGTE 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + +F A  Q+PQ YKQ++MASG DR ++IAP FR E+  + R   E + +D 
Sbjct: 175 LFPMKYFEEDAFLA--QSPQLYKQIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSIDS 232

Query: 240 EMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFL------------RICYDDAIRRY 286
           EM+F+E ++++++ +E ++          N    + L            R+ YD A+   
Sbjct: 233 EMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDILNFELEEPKLPFPRVSYDKALEIL 292

Query: 287 G 287
           G
Sbjct: 293 G 293



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL   G EI+SGG R H  +++++     G++ E     F    +AF+ GMPPHGG   
Sbjct: 353 FDLEYRGVEISSGGQREHRHDILVEQIKEKGLNPE----SFEFYLKAFRYGMPPHGGFGL 408

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++  +L   N+REV LFP
Sbjct: 409 GAERLIKQMLDLPNIREVILFP 430


>gi|304314436|ref|YP_003849583.1| aspartyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587895|gb|ADL58270.1| aspartyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 437

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 153/296 (51%), Gaps = 27/296 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVH +R  GGIIF+ +RD  G+ Q+ A       ++ KS
Sbjct: 8   RTHYSKDIKPEMDGEEVTVMGWVHEIRDLGGIIFVLLRDRDGLIQITAPSKKIEKDLFKS 67

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +R    E V+   G V         ++   G  E+    + +L+ +++ PLP+    +  
Sbjct: 68  IRKLKKESVVAFGGRVQ-------ESDKAPGGFEIIPSFLRVLNPSKQ-PLPLDPTEKVK 119

Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             I  R   RFLDLR+ ++      ++R+++S+R  +    F+E +TP L AS+ EG  +
Sbjct: 120 AEIDTRLDARFLDLRKPSVSAIFKIKSRMLHSVRVFLEENGFLEINTPKLVASATEGGTE 179

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               +   + +F  L Q+PQ YKQ++M++G DR ++IAP FR E+  + R   E   +D+
Sbjct: 180 LFPITYFEREAF--LGQSPQLYKQMMMSTGLDRVYEIAPIFRAEEHDTLRHLNEVISIDI 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSN---------GNTV---SNNFLRICYDDAI 283
           E SFV+ +D++  +E ++  V E+ +          G T+      F R+ YD+A+
Sbjct: 238 EASFVDHEDVMKILERLVVRVIEDVNEHCTDALETLGRTLEVPETPFERLEYDEAV 293



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 4/86 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +++ +DL+    EI+SG +R H  +++++  S  G++ +  E+       AF+ GMPPH 
Sbjct: 348 RSYAFDLMYRDLEISSGAMRVHQHDLLVEKISRQGLNPDSFESYLA----AFEYGMPPHA 403

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G +R  M L G  N+RE  LFP
Sbjct: 404 GWGLGAERFNMTLTGVNNIRETVLFP 429


>gi|52550554|gb|AAU84403.1| aspartyl-tRNA synthetase [uncultured archaeon GZfos9E5]
          Length = 439

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 146/296 (49%), Gaps = 27/296 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59
           +Y T    D    + G  V ++GWVH  R  GG+ FL +RD  G  QV  N   A    F
Sbjct: 9   KYSTEITAD----NDGETVCIAGWVHEKRDLGGVFFLIVRDFGGFAQVTLNRKKAEKELF 64

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              K V  E V+ I+G V S S       II  Q+E+ ++  ++L      PL    +  
Sbjct: 65  ARVKKVPRESVVAIEGKVKSESKAPNGYEIIPNQMEVLSEASQVL------PLDTTEKVG 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   RF+DLR +   +  + R+R++ ++R  +    FIE +TP + +++ EG   
Sbjct: 119 AELDTRLDARFMDLRIERTKQIFIIRSRVLKAIRGFLDEREFIEINTPKIVSAATEGGTA 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S   + +F  L Q+PQ YKQ+LMASGFDR ++IAP FR E+  + +   E   +D+
Sbjct: 179 LFPISYFEREAF--LNQSPQLYKQMLMASGFDRVYEIAPIFRAEEHDTTKHLNEATSMDI 236

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAI 283
           E++FV   +++  +E ++  V+ +  +   ++              F RI Y++AI
Sbjct: 237 EVAFVSDMEVMKILEELIAFVYSKIVDYPGLAKLNLQLPLEVPKTPFRRITYEEAI 292



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E+ASG  R H  E++ Q   + G+S     + F      F+ GMPPH G   
Sbjct: 354 FDLMHPRVELASGSQRVHSYELLKQKIESKGLSA----DSFEFYLDTFRFGMPPHAGWGL 409

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           GIDR++M +L  +N+REV LFP
Sbjct: 410 GIDRLLMCMLEIENIREVVLFP 431


>gi|270668238|ref|ZP_06222511.1| aspartate--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270316714|gb|EFA28493.1| aspartate--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 108

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/105 (57%), Positives = 80/105 (76%), Gaps = 1/105 (0%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQL
Sbjct: 4   RAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQL 63

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           LM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+   ++
Sbjct: 64  LMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFLTAPEV 107


>gi|240103937|ref|YP_002960246.1| aspartyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239911491|gb|ACS34382.1| Aspartyl-tRNA synthetase (aspS) [Thermococcus gammatolerans EJ3]
          Length = 438

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 137/259 (52%), Gaps = 14/259 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60
           YRTH   ++     G  V+++GWV  V+  GGI FL +RD  GI Q+ A     D   F+
Sbjct: 2   YRTHYSSEITEELNGQRVKVAGWVWEVKDLGGIKFLWLRDREGIVQITAPKKKVDPEIFK 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119
           +   + +E V+ ++G+V       +   I+        +K+E+LS AE  LPL   G+ +
Sbjct: 62  LIPKLNAEDVIAVEGIVNFTPKAKLGFEIL-------PEKLEVLSRAETPLPLDPTGKVK 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   RF+D+RR  +      R+ +  ++R       FIE  TP + A++ EG  +
Sbjct: 115 AELDTRLDNRFMDVRRPEVMAIFKIRSSVFKAIRDFFHESGFIEIHTPKIIATATEGGTE 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + +F A  Q+PQ YKQ++MASG DR ++IAP FR E+  + R   E + +D 
Sbjct: 175 LFPMKYFEKDAFLA--QSPQLYKQIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSIDA 232

Query: 240 EMSFVE-QDDILNTMENVL 257
           EM+F+E +++++  +E ++
Sbjct: 233 EMAFIESEEEVMELLERLV 251



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL   G EI SGG R H  +V+++     G++ E     F    +AF+ GMPPHGG   
Sbjct: 353 FDLEYRGVEITSGGQREHRVDVLVEQIKEKGLNPE----SFEFYLKAFRYGMPPHGGFGL 408

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++  +L   N+REV LFP
Sbjct: 409 GAERLIKQMLDLPNIREVILFP 430


>gi|20094147|ref|NP_613994.1| aspartyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|22257050|sp|Q8TXG4|SYD_METKA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|19887157|gb|AAM01924.1| Aspartyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 431

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 134/259 (51%), Gaps = 16/259 (6%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSV 65
             D+     G  VRL+GWVH VR  GGI F+ +RD  GI Q+           FE    +
Sbjct: 7   TADVTPERDGEEVRLAGWVHEVRDLGGIKFVLLRDRTGIVQLTLPKQKVPKETFEKVPKL 66

Query: 66  RSEWVLCIDGLVMSRSAETINAN-IITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES 123
             E V+ ++G        T+ AN    G +E+  Q+IE+LS ++  LPL   G+ +    
Sbjct: 67  TKESVIRVEG--------TVQANEKAPGGVEVIPQRIEVLSESDTHLPLDPTGKVDADLD 118

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R   R LDLRR+        R  +  ++R  +    FIE  TP + AS+ EG  +    
Sbjct: 119 TRLDARVLDLRREEPQAIFKIRNVVTTAIREFLEERGFIEVHTPKIIASATEGGTELFPV 178

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++ A  Q+PQ YKQ+LMA+GF+R ++I P FR E+  + R   E   +D+EMSF
Sbjct: 179 VYFERDAYLA--QSPQLYKQMLMAAGFERVYEIGPIFRAEEHNTRRHLNEAISVDIEMSF 236

Query: 244 VE-QDDILNTMENVLRGVF 261
           +E ++D++  +E +L  VF
Sbjct: 237 IESEEDVMRVLEELLAHVF 255



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 17/150 (11%)

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFAHNPFTMPQGGMES-----LKGNDLLSI 477
           L +++ +  E  W  D P     E E+K+ +    PF + +   E+     +  +D ++ 
Sbjct: 289 LDLLSEHGIEVEWGEDLP----TEAERKLGEIFEEPFFITEWPRETRPFYTMAKDDEVTT 344

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
               +DL+  G E+ASG  R H  +V+++     G+S E     F     AF+ GMPPHG
Sbjct: 345 A---FDLMYQGLELASGAQREHRYDVLVRQIEEQGLSPE----DFRHYLEAFKYGMPPHG 397

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G   G++R +M + GA+N+REV+LFP  + 
Sbjct: 398 GWGLGLERTLMTITGAENIREVTLFPRDRK 427


>gi|193084078|gb|ACF09748.1| aspartyl-tRNA synthetase [uncultured marine group III euryarchaeote
           AD1000-40-D7]
          Length = 427

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 24/295 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFE 60
           + T  CG++  SD G+   L GW+   R  GGI F+ +RD  G+ Q+       D   F+
Sbjct: 2   FYTRKCGEIEESDFGTEQTLCGWLQDTRNLGGIAFIQLRDITGVIQLTLLKKKLDEEKFK 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119
              ++  E ++ + G+V              G +E+    IE+++ AE  LPL V  + +
Sbjct: 62  NWTTINRESIILVRGIVKENKE-------APGGVEMLPDNIELVNEAETPLPLGVIDKID 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   R+LDLR+  +  N   R  I  ++   +  E F+E  TP + AS+ EG   
Sbjct: 115 SEIETRLNARYLDLRKSEIAANFQIRAAISGAVHKHLRREKFLEVQTPKIIASATEGGTS 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  ++ ++ A  Q+PQ YKQ+LM  G +R +++ P FR E+  + R   EF  +D+
Sbjct: 175 LFEMKYFDRTAYLA--QSPQLYKQMLMGGGLERVYEVGPAFRAEEHNTPRHLNEFISIDI 232

Query: 240 EMSFVEQDDILNTMENVL----RGVFEEFSNGNTVSNNFL-------RICYDDAI 283
           EMSF + D ++  ME ++    R V +E     T+    +       RI YD+A+
Sbjct: 233 EMSFADDDVVMGVMERLIDTAARAVAKETEALETLGIEPIELELPLPRITYDEAV 287



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D + N  E+ SGG R H   ++ +     G+      + F      F+ GMPPH G   
Sbjct: 342 FDFMYNEVEMTSGGQRVHDVNLLRKRLKEQGLDP----DGFNHYLDPFRYGMPPHAGWGL 397

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+DR+ M+  GAKNVRE  LFP
Sbjct: 398 GLDRLAMIFAGAKNVRECVLFP 419


>gi|254173017|ref|ZP_04879691.1| aspartyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033173|gb|EEB74001.1| aspartyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 438

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 136/259 (52%), Gaps = 14/259 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60
           YRTH   ++     G  V+++GWV  V+  GGI FL +RD  GI Q+ A     D   F+
Sbjct: 2   YRTHYSSEITEELNGQRVKVAGWVWEVKDLGGIKFLWLRDREGIVQITAPKKKVDPEIFK 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119
           +   + SE V+ ++G V       +   I+        +K+EILS AE  LPL   G+ +
Sbjct: 62  LIPKLNSEDVVAVEGTVNFTPKAKLGFEIL-------PEKLEILSRAEAPLPLDPTGKVK 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   RF+D+RR  +      R+ +  ++R       FIE  TP + A++ EG  +
Sbjct: 115 AELDTRLDNRFMDVRRPEVMAIFKIRSSVFKAIRDFFHENGFIEIHTPKIIATATEGGTE 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + +F A  Q+PQ YKQ++MASG DR ++IAP FR E+  + R   E + +D 
Sbjct: 175 LFPMKYFEKDAFLA--QSPQLYKQIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSVDA 232

Query: 240 EMSFVE-QDDILNTMENVL 257
           EM+F+E +++++  +E ++
Sbjct: 233 EMAFIESEEEVMALLERLV 251



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL   G EI SGG R H  +V+++     G++ E     F    +AF+ GMPPHGG   
Sbjct: 353 FDLEYRGVEITSGGQREHRVDVLVEQIKEKGLNPE----SFEFYLKAFRYGMPPHGGFGL 408

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++  +L   N+REV LFP
Sbjct: 409 GAERLIKQMLDLPNIREVILFP 430


>gi|14590860|ref|NP_142932.1| aspartyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|6647821|sp|O58776|SYD_PYRHO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3257434|dbj|BAA30117.1| 438aa long hypothetical aspartyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 438

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 147/297 (49%), Gaps = 28/297 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RTH   ++     G  V+++GWV  V+  GGI F+ IRD  GI QV A       EI K 
Sbjct: 3   RTHYSNEITEELNGKRVKVAGWVQEVKDLGGIKFIWIRDREGIVQVTAPKKKVSQEIFKL 62

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREY 120
              + SE V+ ++G+V       +   +I        +K+E++S A+  LPL   G+ + 
Sbjct: 63  IPKLNSEDVIVVEGIVNFTPKAKLGFEVI-------PEKLEVISRAKTPLPLDPTGKVKA 115

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RF+DLR   +      R+ +  ++R    +E FIE  TP + A++ EG  + 
Sbjct: 116 ELDTRLDNRFMDLRNPKVMAIFKIRSSVFRAVREFFYSEGFIEIHTPKIIATATEGGTEL 175

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  + +F A  Q+PQ YKQ++MA+G D+ F+IAP FR E+  + R   E + +D E
Sbjct: 176 FPLKYFERDAFLA--QSPQLYKQMMMATGLDKVFEIAPIFRAEEHNTTRHLNEAWSIDAE 233

Query: 241 MSFVEQD-DILNTMENVLRGVFE-------------EFSNGNTVSNNFLRICYDDAI 283
           M+F+E + ++++ +E ++  V               EF   N     F RI YD A+
Sbjct: 234 MAFIENEGEVMDLLERLISYVINYVREHNEKELKTLEFEL-NEPKRPFPRITYDKAL 289



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL   G EI+SGG R H  +V+L+     G++       F    +AF+ GMPPHGG   
Sbjct: 353 FDLEYRGVEISSGGQREHRHDVLLEQIKEKGLNP----KSFEFYLKAFEYGMPPHGGFGL 408

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++M +L   N+REV LFP
Sbjct: 409 GAERLIMRMLDIGNIREVILFP 430


>gi|15920386|ref|NP_376055.1| aspartyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|62287582|sp|Q976I3|SYD_SULTO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110590680|pdb|1WYD|A Chain A, Crystal Structure Of Aspartyl-Trna Synthetase From
           Sulfolobus Tokodaii
 gi|110590681|pdb|1WYD|B Chain B, Crystal Structure Of Aspartyl-Trna Synthetase From
           Sulfolobus Tokodaii
 gi|15621168|dbj|BAB65164.1| 429aa long hypothetical aspartyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 429

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 138/258 (53%), Gaps = 11/258 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR+H   D+     G  V  +GWVH +R  GG  F+ +RD  G+ QVV + +S+ F I++
Sbjct: 2   YRSHFIADVTPEYDGKEVIWAGWVHLLRDLGGKKFIILRDKTGLGQVVVDKNSSAFGISQ 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122
            +  E V+ + G+V +      +     G IEL A++I +LS A+  LPL V G+ +   
Sbjct: 62  ELTQESVIQVRGIVKA------DKRAPRG-IELHAEEITLLSKAKAPLPLDVSGKVKADI 114

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R + R LDLRR  +   I  ++  + + R  +  E FIE  TP + AS+ EG      
Sbjct: 115 DTRLRERVLDLRRQEMQAVIKIQSLALKAFRETLYKEGFIEIFTPKIIASATEGGAQLFP 174

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                + +F A  Q+PQ YK+ LMA   +R F++AP +R E+  +     EF  +D+EM+
Sbjct: 175 VIYFGKEAFLA--QSPQLYKE-LMAGVVERVFEVAPAWRAEESDTPFHLAEFISMDVEMA 231

Query: 243 FVEQDDILNTMENVLRGV 260
           F + +D++  +E +L  +
Sbjct: 232 FADYNDVMQLLEKILHNI 249



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI SG  RNH  EV+ +A    G+  E     F    + F  GMPPH G   
Sbjct: 344 FDLIYKFLEIVSGSTRNHKREVLEEALKKKGLKPE----SFEFFLKWFDYGMPPHAGFGM 399

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+ R++++L G ++V+E+  FP  + 
Sbjct: 400 GLARLMVMLTGIQSVKEIVPFPRDKK 425


>gi|212223489|ref|YP_002306725.1| aspartyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212008446|gb|ACJ15828.1| aspartyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 443

 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 136/259 (52%), Gaps = 14/259 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60
           YRTH    +     G  V+++GWV  V+  GGI FL IRD  GI Q+ A     D   F+
Sbjct: 7   YRTHYSSQITEDLNGQRVKVAGWVWEVKDLGGIKFLWIRDREGIVQITAPKKKVDPEIFK 66

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119
           +   + SE V+ ++G+V       +   I+        +K+E+LS A+  LPL   G+ +
Sbjct: 67  LIPKLNSEDVIAVEGIVNFTPKAKLGFEIL-------PEKLEVLSRAQTPLPLDPTGKVK 119

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   RF+D+R+  +      R+ +  ++      E FIE  TP + A++ EG  +
Sbjct: 120 AELDTRLDNRFMDVRKPEVTAIFKIRSSVFKAVHDFFHGEGFIEVHTPKIIATATEGGTE 179

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + +F A  Q+PQ YKQ++MASG DR +++AP FR E+  + R   E + +D 
Sbjct: 180 LFPMKYFEKDAFLA--QSPQLYKQIMMASGLDRVYEVAPIFRAEEHNTTRHLNEAWSIDA 237

Query: 240 EMSFVE-QDDILNTMENVL 257
           EM+F+E +++++  +E ++
Sbjct: 238 EMAFIENEEEVMELLERLI 256



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL   G EI SGG R H  +V+++     G++ E     F    +AF+ GMPPHGG   
Sbjct: 358 FDLEYRGVEITSGGQREHRVDVLVEQIKEKGLNPE----SFEFYLKAFRYGMPPHGGFGL 413

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++  +L   N+REV LFP
Sbjct: 414 GAERLLKQMLNLNNIREVVLFP 435


>gi|4388836|pdb|1B8A|A Chain A, Aspartyl-Trna Synthetase
 gi|4388837|pdb|1B8A|B Chain B, Aspartyl-Trna Synthetase
          Length = 438

 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 148/301 (49%), Gaps = 26/301 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60
           YRTH   ++     G  V+++GWV  V+  GGI FL IRD  GI Q+ A     D   F+
Sbjct: 2   YRTHYSSEITEELNGQKVKVAGWVWEVKDLGGIKFLWIRDRDGIVQITAPKKKVDPELFK 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119
           +   +RSE V+ ++G+V       +   I+        +KI +L+ AE  LPL   G+ +
Sbjct: 62  LIPKLRSEDVVAVEGVVNFTPKAKLGFEIL-------PEKIVVLNRAETPLPLDPTGKVK 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   RF+DLRR  +      R+ +  ++R       FIE  TP + A++ EG  +
Sbjct: 115 AELDTRLNNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATEGGTE 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + +F A  ++PQ YK+++MASG DR ++IAP FR E+  + R   E + +D 
Sbjct: 175 LFPMKYFEEDAFLA--ESPQLYKEIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSIDS 232

Query: 240 EMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFL------------RICYDDAIRRY 286
           EM+F+E ++++++ +E ++          N    + L            R+ YD A+   
Sbjct: 233 EMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDILNFELEEPKLPFPRVSYDKALEIL 292

Query: 287 G 287
           G
Sbjct: 293 G 293



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL   G EI+SGG R H  +++++     G++ E     F    +AF+ GMPPHGG   
Sbjct: 353 FDLEYRGVEISSGGQREHRHDILVEQIKEKGLNPE----SFEFYLKAFRYGMPPHGGFGL 408

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++  +L   N+REV LFP
Sbjct: 409 GAERLIKQMLDLPNIREVILFP 430


>gi|193084144|gb|ACF09810.1| aspartyl-tRNA synthetase [uncultured marine group III euryarchaeote
           SAT1000-53-B3]
          Length = 427

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 142/295 (48%), Gaps = 24/295 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           + T  CG++  SD GS   L GW+   R  GGI FL +RD  G+ Q+         E  K
Sbjct: 2   FYTRKCGEIEESDFGSEQTLCGWLQDTRNLGGIAFLQLRDITGVIQLTLLKKKLGDENFK 61

Query: 64  S---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119
           S   +  E ++ + G+V              G +E+    IE+++ AE  LPL V  + +
Sbjct: 62  SWANINRESIILVRGIVKENKE-------APGGVEMLPDNIELVNEAETPLPLGVIDKID 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   R+LDLR+  +  N   R  I  ++   +  ENF+E  TP + AS+ EG   
Sbjct: 115 SEIETRLNARYLDLRKTEIVANFQIRAAISGAVHKHLRRENFLEVQTPKIIASATEGGTS 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  ++ ++ A  Q+PQ YKQ+LM+ G +R +++ P FR E+  + R   EF  +D+
Sbjct: 175 LFEMKYFDKTAYLA--QSPQLYKQILMSGGLERVYEVGPAFRAEEHNTPRHLNEFISIDI 232

Query: 240 EMSFVEQDDILNTMENVL----RGVFEEFSNGNTVSNNFL-------RICYDDAI 283
           EMSF + D ++  ME ++    R V +E      +    +       RI YD+A+
Sbjct: 233 EMSFADDDVVMGVMERLVATAARSVSKETKALKALGIEPIDLELPLPRITYDEAV 287



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D + N  E+ SGG R H   ++ +     G+      + F      F+ GMPPH G   
Sbjct: 342 FDFMYNEVEMTSGGQRVHDVNLLRERLKEQGLDP----DGFNHYLDPFRYGMPPHAGWGL 397

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+DR+ M+  GAKNVRE  LFP  +N
Sbjct: 398 GLDRLAMIFAGAKNVRECVLFPRDRN 423


>gi|255562232|ref|XP_002522124.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223538723|gb|EEF40324.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 206

 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 107/206 (51%), Gaps = 4/206 (1%)

Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFP 441
           +  E +  R     GD   F  G            R  IA E+ +I+ +     W  DF 
Sbjct: 1   MKKEELLRRCSAGPGDLILFAVGHYASVNKTLDRLRMFIANEICLIHHSRNSILWETDFL 60

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +EWN+ E++++  H+PFT P    E ++  DL S +A  YD+V NG EI  G +R +  
Sbjct: 61  MFEWNDTEQRLEALHHPFTAPNP--EDME--DLSSARALAYDMVYNGVEIGGGSLRIYKR 116

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E+  +    VGIS E  E +FG L  A   G PPHGGIA G+DR+VMLL  A ++R+V  
Sbjct: 117 EIQQKVLEIVGISAEQAEEKFGYLLEALDMGAPPHGGIAYGLDRLVMLLADANSIRDVIA 176

Query: 562 FPMSQNFCDLLMGSPSTVSVEQLREL 587
           FP +      L  +PS V  +QL++L
Sbjct: 177 FPKTTTAQCALTRAPSEVGPQQLKDL 202


>gi|332159186|ref|YP_004424465.1| aspartyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034649|gb|AEC52461.1| aspartyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 438

 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 151/302 (50%), Gaps = 23/302 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   ++     G  V+++GWV  V+  GGI F+ +RD  GI QV A       EI K+
Sbjct: 3   RTHYSNEITEELNGQKVKIAGWVQEVKDLGGIKFVWVRDREGIVQVTAPKKKVNQEIFKT 62

Query: 65  V---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREY 120
           +    SE V+ ++G+V       +   II        +K+EI+S A+  LPL   G  + 
Sbjct: 63  IPKLNSEDVIVVEGIVNFTPKAKLGFEII-------PEKLEIISRAKTPLPLDPTGRVKA 115

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RF+DLR   +      R+ +  ++R     E FIE  TP + A++ EG  + 
Sbjct: 116 ELDTRLDNRFIDLRNPKVMAIFKIRSGVFRAVREFFYEEGFIEIHTPKIIATATEGGTEL 175

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  + +F A  Q+PQ YKQ++MA+G DR F+IAP FR E+  + R   E + +D E
Sbjct: 176 FPLKYFEKDAFLA--QSPQLYKQMMMATGLDRVFEIAPIFRAEEHNTTRHLNEAWSIDAE 233

Query: 241 MSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           M+F+E ++++++ +E ++  V       N V  N  R   +  I  +  DKP    P + 
Sbjct: 234 MAFIESEEEVMDLLERLVVYVV------NYVRENHER---ELKILEFELDKPKQPFPRLT 284

Query: 300 HN 301
           ++
Sbjct: 285 YD 286



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL   G EI+SGG R H  ++++Q     G++ E     F    +AF+ GMPPHGG   
Sbjct: 353 FDLEYRGVEISSGGQREHRHDILVQQIKEKGLNPE----SFEFYLKAFEYGMPPHGGFGL 408

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++M +L   N+REV LFP
Sbjct: 409 GAERLIMRMLDIGNIREVILFP 430


>gi|255562234|ref|XP_002522125.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223538724|gb|EEF40325.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 328

 Score =  130 bits (327), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 144/282 (51%), Gaps = 64/282 (22%)

Query: 24  SGWVHR-VRPHGGIIFLD-----IRDHYGITQVVANPDSACFEIAKSV----RSEWVLCI 73
           S  +H+ +R  GG++F++     +      T V A PD   F  A+S+    R ++V+ +
Sbjct: 84  SKLLHQMIRIVGGLLFIESTVVSLSSILETTLVTALPDE--FPDARSIMNDLRLQYVVAV 141

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRFLD 132
           +G+V SR  E++N  + TG  E++A+ ++IL +V  +LP  V    +  +SI+ +     
Sbjct: 142 EGVVRSRPHESVNKKMKTGLTEVAAENVQILNAVVSKLPFLVTTSDDAKDSIKEE----- 196

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
                                        I  S  I+ + +                +FY
Sbjct: 197 -----------------------------IPLSQSIVYSEA---------------RNFY 212

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           +LPQ PQ +KQ+LM SGFD+Y+Q A CFRDED R+DR P EF QLDME++    +D+L  
Sbjct: 213 SLPQIPQLFKQMLMVSGFDKYYQFARCFRDEDLRADRQP-EFTQLDMELALTPLEDMLKL 271

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            E+V+R VF +   G  + N F R+ Y +A+ RYG+D+ D R
Sbjct: 272 NEDVIRKVFLKI-KGVQLPNPFPRLAYAEAMSRYGSDRSDTR 312


>gi|116753936|ref|YP_843054.1| aspartyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|116665387|gb|ABK14414.1| aspartyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 434

 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 141/295 (47%), Gaps = 25/295 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH  G++     GS V L+G VH +R  GGI FL +RD  G+ QV       D    E 
Sbjct: 4   RTHYSGEIRPEMDGSEVTLAGHVHEIRDLGGICFLVLRDREGLAQVTVLTKRADRKLVET 63

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREY 120
            + V  E V+ + G V    AE    N      E+  + +E+LS A+  LPL   G+   
Sbjct: 64  VRGVSRESVVLVRGRV---KAEPKAPN----GFEILPEAVEVLSRADSPLPLDPTGKVGA 116

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RFLDLRR          + ++ S+R     + FIE  TP + A++ EG    
Sbjct: 117 ELDTRLDARFLDLRRPASMAVFKIESAVMRSLRNTFYEKGFIEVCTPKIVATATEGGTAL 176

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S   + +F  L Q+PQ YKQ+LMA+G DR F+I P FR E+  + R   E   +D+E
Sbjct: 177 FPISYFEREAF--LNQSPQLYKQILMATGLDRVFEIGPIFRAEEHDTRRHLNEAISVDVE 234

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAI 283
           +S+ + +D+++ +EN +   +   S            + +     F RI Y +A+
Sbjct: 235 VSYADHEDVMSLLENAVSSAYRYVSEICEKELQILGVDLDIPKTPFRRITYTEAL 289



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E+ASG  R H  E+++      G++ E     F    + F+ GMPPH G   
Sbjct: 349 FDLMHPSMELASGAQRVHDYELLISRIKEKGLNPE----SFEFYLKPFRYGMPPHAGWGL 404

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+ R+V  +LG +N+R+  LFP
Sbjct: 405 GLARLVQTMLGLENIRDAVLFP 426


>gi|73670622|ref|YP_306637.1| aspartyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|97196719|sp|Q466Y5|SYD_METBF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|72397784|gb|AAZ72057.1| aspartyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 444

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 135/269 (50%), Gaps = 15/269 (5%)

Query: 1   MHRYRTHSCGDLGVSDV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYG---ITQVVANPD 55
           + + RTH   D+    V  G  + L+GWVH VR  GGI F+ +RD  G   +T V    D
Sbjct: 3   LAKLRTHYTADVKPEKVDNGQKITLAGWVHEVRDLGGICFVVLRDREGKAQVTLVKKKID 62

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPV 114
              F+ A+ +  E V+ + G V                 EL  ++I +L+VA   LP+  
Sbjct: 63  KELFDAARRLVRESVISVTGSVKFEEK-------APNGYELLPEEITVLNVANSPLPMDT 115

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
            G+ E     R   RF+DLRR         R + + + R   +   FIE +TP + A++ 
Sbjct: 116 TGKVEAELDTRLDSRFIDLRRAETTAVFKIRHQALQATREYFVQNGFIETATPKVVATAT 175

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EG       +  ++ +F  L Q+PQ +KQ+LM+ GFDR F+I P FR E+  + R   E 
Sbjct: 176 EGGTALFPITYFDREAF--LNQSPQLFKQILMSGGFDRVFEIGPIFRAEEHDTRRHLNEA 233

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEE 263
             +D+E+SF +  D++  +EN++  V+ +
Sbjct: 234 TSIDVEVSFADHFDVMEILENLVAYVYAQ 262



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D++    E++SG  R H+ +++     + G++ E     F    +AF+ GMPPH G   
Sbjct: 359 FDMMHRTMELSSGAQRIHIPDLLKSRIESQGLNPE----GFEFYLKAFEYGMPPHAGWGM 414

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R +M +LG +N+R+  LFP
Sbjct: 415 GCERFIMTMLGTENIRDTVLFP 436


>gi|52548877|gb|AAU82726.1| aspartyl-tRNA synthetase [uncultured archaeon GZfos19C7]
          Length = 441

 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 147/300 (49%), Gaps = 25/300 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-----D 55
           M ++      ++   + G  V ++GWVH  R  GG+ FL +RD  G  QV  +      +
Sbjct: 3   MLKWNRKYATEISSDNDGETVCIAGWVHEKRDLGGVFFLIVRDFSGFAQVTLHKHKGGVE 62

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
              F   K V  E V+ I+G V S S       II  Q+E+ ++   +L      PL   
Sbjct: 63  QELFARVKKVPRESVVAIEGKVKSESKAPNGYEIIPDQMEVLSEASLVL------PLDTT 116

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
            +       R   RF+DLR +   +  + R+R++ ++R  +    FIE +TP + +++ E
Sbjct: 117 EKVGAELDTRLDARFMDLRIERTKQIFIIRSRVLKAIREFLDERGFIEINTPKIVSAATE 176

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           G       S   + +F  L Q+PQ YKQ+LMASGFDR ++IAP FR E+  + +   E  
Sbjct: 177 GGTALFPISYFEREAF--LNQSPQLYKQMLMASGFDRVYEIAPIFRAEEHDTTKHLNEAT 234

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAI 283
            +D+E++FV   +++  +E ++  V+ +  + + ++              F RI Y++AI
Sbjct: 235 SMDIEVAFVSDKEVMKILEELIAFVYSKVVDYSGLAKLNLQLPLEVPKTPFRRITYEEAI 294



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E+ASG  R H  E++ +   + G+S     + F      F+ GMPPH G   
Sbjct: 356 FDLMHPRVELASGSQRVHSYELLKRNIESKGLSA----DSFEFYLDTFRFGMPPHAGWGL 411

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           GIDR++M +L  +N+REV LFP
Sbjct: 412 GIDRLLMSMLEIENIREVVLFP 433


>gi|257076701|ref|ZP_05571062.1| aspartyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 427

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 145/294 (49%), Gaps = 26/294 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+   D+   D GS V + GWV   R    ++F+ +RD+ G  QV A  DS   ++   
Sbjct: 2   RTY-IADIKTLDDGSDVTIKGWVQETRKIKNLMFIIMRDNTGSIQVTAKKDSMKNYDQLY 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122
            +  E V+ + G +  +S       I    +E+   +IEILS+A+  LPL V        
Sbjct: 61  DITRESVISVYGTLNKKS-------ISKSGMEIQGIEIEILSIADTPLPLGVIDRVSADF 113

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             R   RFLDLR+   H  I +  ++++  +R  M  ENFIE  TP + A++ EG  D  
Sbjct: 114 DTRLNNRFLDLRKPE-HLLIFQFESQLLFGIREFMNKENFIEVHTPKIVAAATEGGADLF 172

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + +F  L Q+PQ YK++L+ASGFD+ F++ P FR E   + R   EF  +DME 
Sbjct: 173 RVEYFEKNAF--LNQSPQLYKEILIASGFDKVFEVGPAFRAEKENTVRHLNEFTSIDMEA 230

Query: 242 SFVEQDDILNTMEN-----------VLRGVFEEFS-NGNTVSNNFLRICYDDAI 283
           +F++    +  +EN           ++    EE+  +   +   F RI Y+D I
Sbjct: 231 AFIDDKKAMEYLENAISYAVNRNIDLMHTKLEEYGYHLEKIETPFPRISYEDGI 284



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL  N  E+ SG  R H  +++   F   G++K    N F    +AF+ GMPPH G   
Sbjct: 342 FDLQLNDIEVTSGAQRIHNYKMLEDNFMKKGLNK----NDFEFYEKAFKFGMPPHAGWGL 397

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM LL   NVRE +LFP
Sbjct: 398 GLERLVMNLLHLNNVRESTLFP 419


>gi|14521164|ref|NP_126639.1| aspartyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|13878787|sp|Q9V036|SYD_PYRAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|5458382|emb|CAB49870.1| aspS aspartyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 438

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 143/296 (48%), Gaps = 26/296 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RTH   ++     G  V+++GWV  V+  GGI F+ IRD  GI QV A       EI K 
Sbjct: 3   RTHYSSEITEELNGKKVKVAGWVQEVKDLGGIKFIWIRDREGIVQVTAPKKKVPQEIFKL 62

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREY 120
              + SE V+ ++G+V       +   II        +K+E++S A+  LPL   G+ + 
Sbjct: 63  IPKLNSEDVIVVEGIVNFTPKAKLGFEII-------PEKLEVISKAKTPLPLDPTGKVKA 115

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RF+DLR   +      R+ +  + R     E FIE  TP + A++ EG  + 
Sbjct: 116 ELDTRLDNRFMDLRNPRVMSIFKIRSSVFRATREFFYKEGFIEIHTPKIIATATEGGTEL 175

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                    +F A  Q+PQ YKQ++M++G D+ F+I P FR E+  + R   E + +D E
Sbjct: 176 FPLKYFENDAFLA--QSPQLYKQMMMSTGLDKVFEIGPIFRAEEHNTTRHLNEAWSIDAE 233

Query: 241 MSFVE-QDDILNTMENVLRGVFEEFSNGNTV------------SNNFLRICYDDAI 283
           M+F+E ++++++ +E ++  V       N                 F RI YD+A+
Sbjct: 234 MAFIESEEEVMDLLERLILYVINYVRENNEKELKILEFELNEPKKPFPRITYDEAL 289



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL   G EI+SGG R H  +++++     G++ E     F    RAF+ GMPPHGG   
Sbjct: 353 FDLEYRGVEISSGGQREHRHDILVEQIREKGLNPE----SFEFYLRAFEYGMPPHGGFGL 408

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++M +L   N+REV LFP
Sbjct: 409 GAERLIMRMLDIGNIREVILFP 430


>gi|147921302|ref|YP_684884.1| aspartyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|110620280|emb|CAJ35558.1| aspartyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 434

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 134/262 (51%), Gaps = 15/262 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V +SGWVH +R  GG+ FL +RD  G+ QV         EI  +
Sbjct: 3   RTHYSKDITPEMNGDAVIVSGWVHEIRDFGGLAFLILRDRAGLVQVTMPKKKVPKEIIDT 62

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           V+    E V+ I G V    AE    N      EL   +IE+LS+AE  PLP+    + P
Sbjct: 63  VKGLSRESVVSIGGTV---KAEAKAPN----GYELIPTEIEVLSIAE-TPLPLDPTGKVP 114

Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R   RF+D+R   +      R  +I ++R  + A   +E +TP + A++ EG   
Sbjct: 115 AELDTRLDARFMDIRSPEVTAIFTIRAHMIKAVRDFLSANGCLEIATPKIVATATEGGTA 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S  ++ +F  L Q+PQ YKQ++MA+G DR ++I P FR E+  + +   E   +D+
Sbjct: 175 LFPISYFDREAF--LNQSPQLYKQMMMAAGMDRVYEIGPIFRAEEHATRKHLNEATSIDV 232

Query: 240 EMSFVEQDDILNTMENVLRGVF 261
           E+SF   +D +  +EN +  V+
Sbjct: 233 ELSFATHEDAMILLENTIAYVY 254



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E++SG  R H  + +++   +    +++  + F     +F+ GMPPH G   
Sbjct: 349 FDLMHPRMELSSGAQREHRVDKLIKNLED----RDLNPDSFKFYLDSFRYGMPPHAGWGL 404

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++  +L   NVRE  LFP
Sbjct: 405 GAERLLQTMLNLNNVREAVLFP 426


>gi|20090536|ref|NP_616611.1| aspartyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|24212406|sp|Q8TQ68|SYD_METAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|19915564|gb|AAM05091.1| aspartyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 444

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 141/297 (47%), Gaps = 27/297 (9%)

Query: 5   RTHSCGDLGVSDV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYG---ITQVVANPDSACF 59
           RTH   ++    V  G  + L+GW+H VR  GGI F+ +RD  G   +T V    D   F
Sbjct: 7   RTHYTAEVKPESVDNGQKITLAGWIHEVRDLGGICFVVLRDREGKAQVTLVKKKIDKELF 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER 118
           + A+ +  E V+ + G V                 EL  ++I++L+VA   LP+   G+ 
Sbjct: 67  DAARRLIRESVISVTGSVKFEEK-------APNGYELLPEEIKVLNVAGSPLPMDTTGKV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E     R   RF+DLRR         R   + ++R   +   FIE +TP + A++ EG  
Sbjct: 120 EAELDTRLDSRFIDLRRAETTAVFKIRHEALQAIREYFVKNKFIETATPKVVATATEGGT 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                +  ++ +F  L Q+PQ +KQ+LM  GFDR F+I P FR E+  + R   E   +D
Sbjct: 180 ALFPITYFDREAF--LNQSPQLFKQILMGGGFDRVFEIGPIFRAEEHDTRRHLNEATSID 237

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAI 283
           +E+SF +  D++  +EN++  ++         S              FL++ YD+ I
Sbjct: 238 VEVSFADHFDVMEILENLVAHIYTRVIENCKASLEILGVELKVPKTPFLKLTYDEVI 294



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D++    E++SG  R H+SE++     + G++     + F    +AF+ GMPPH G   
Sbjct: 359 FDMMHRTMELSSGAQRIHISELLKSRIESQGLNP----DGFEFYLKAFEYGMPPHAGWGM 414

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R VM +LG +N+R+  LFP
Sbjct: 415 GCERFVMTMLGTENIRDTVLFP 436


>gi|21226176|ref|NP_632098.1| aspartyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|24212403|sp|Q8Q0R2|SYD_METMA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|20904406|gb|AAM29770.1| Aspartyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 444

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 141/297 (47%), Gaps = 27/297 (9%)

Query: 5   RTHSCGDLGVSDV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYG---ITQVVANPDSACF 59
           RTH   D+    V  G  V L+GWVH VR  GGI F+ +RD  G   +T V    D   F
Sbjct: 7   RTHYTADVRPDKVENGQKVTLAGWVHEVRDLGGICFVVLRDREGKAQVTLVKKKIDKDLF 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER 118
           + A+ +  E V+ + G V                 EL   +I +L+V+   LP+   G+ 
Sbjct: 67  DAARRLVRESVISVTGSVKFEEK-------APNGYELLPDEINVLNVSGSPLPMDTTGKV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E     R   RF+DLRR         R   + ++R   +  NFIE +TP + A++ EG  
Sbjct: 120 EAELDTRLDSRFIDLRRAETTAVFKIRHESLRAIREYFVKYNFIETATPKVVATATEGGT 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                +  ++ +F  L Q+PQ +KQ+LM+ GFDR F+I P FR E+  + R   E   +D
Sbjct: 180 ALFPITYFDREAF--LNQSPQLFKQILMSGGFDRVFEIGPIFRAEEHDTRRHLNEATSID 237

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAI 283
           +E+SF +  D++  +EN++  V+         S              FL++ YD+ I
Sbjct: 238 VEVSFADHFDVMELLENLVAYVYTRVIENCKSSLEVLGVDLKVPKTPFLKLTYDEVI 294



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D++    E++SG  R H+  ++     + G++     + F    +AF+ GMPPH G   
Sbjct: 359 FDMMHRTMELSSGAQRIHIPSLLKNRIESQGLNP----DGFEFYLKAFEFGMPPHAGWGM 414

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R VM +LG +N+R+  LFP
Sbjct: 415 GCERFVMTMLGTENIRDTVLFP 436


>gi|70606564|ref|YP_255434.1| aspartyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|68567212|gb|AAY80141.1| aspartyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 428

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 140/281 (49%), Gaps = 22/281 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V L+GWVH +R  GG  FL +RD  GI Q+V +  S  F+    +  E V+ + G+V
Sbjct: 15  GKEVTLAGWVHNIRDLGGKKFLLLRDKTGIGQIVVDKSSPSFQEISDISQESVIMVKGVV 74

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136
            +        N     +E+ A++++ILS A+  LPL V G+ +     R K R LDLRR 
Sbjct: 75  KA-------DNRAPNGVEVHAKEVKILSKAKSPLPLDVSGKVKADIDTRLKERVLDLRRQ 127

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +   +  +   + S R  +  E F+E  TP + AS+ EG           + +F A  Q
Sbjct: 128 EMQSILKIQNITLKSFRETLYKEGFVEVFTPKIIASATEGGAQLFSVIYFGETAFLA--Q 185

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ YK+LL A   ++ F+IAP +R ED  +     EF  +D+EM+F   +D +  +E +
Sbjct: 186 SPQLYKELL-AGVVEKVFEIAPAWRAEDSDTPYHLAEFISMDVEMAFGNYEDAMKLLEKL 244

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +  +       N+V N        D ++    + PD++ PI
Sbjct: 245 IYNIV------NSVKNE-----ASDELKILSHNLPDVKIPI 274



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EIASG  RNH  EV+  +    G+  E     F    R F  GMPPH G   
Sbjct: 343 FDLIYRWLEIASGSTRNHKREVLEDSLRKRGLKPE----NFEFFLRWFDYGMPPHTGFGM 398

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G  R++++L G  NV+E+  FP  + 
Sbjct: 399 GFARLLVMLTGIHNVKEIVPFPRDKK 424


>gi|213400761|gb|ACJ47029.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Armadillidium
           vulgare]
          Length = 168

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 76/172 (44%), Positives = 105/172 (61%), Gaps = 9/172 (5%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           GEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F R+ Y DA+ +YG+DKP
Sbjct: 1   GEFYQLDLEMSFVTQEDIFQVIESTLYKVFAKFSR-KSVDKDFPRVTYKDAMLKYGSDKP 59

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARS 350
           DLRNP+++ +VTE F  SEF +F    ++  G  V AIPA K     R+F D+  E A+ 
Sbjct: 60  DLRNPLLISDVTEIFRDSEFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEHAKK 117

Query: 351 Q-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
           + G  GL YI    D+ G     GP+AK LN     +I+   +++ GDS FF
Sbjct: 118 EFGAKGLGYI--TFDKDG--IAKGPIAKFLNDNRLNSIKEITNIEPGDSVFF 165


>gi|52548501|gb|AAU82350.1| aspartyl-tRNA synthetase [uncultured archaeon GZfos17A3]
          Length = 439

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 145/296 (48%), Gaps = 27/296 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACF 59
           +Y T    D    + G  V ++GWVH  R  GG+ FL +RD  G  QV  N    +   F
Sbjct: 9   KYSTEITAD----NDGETVCIAGWVHEKRDLGGVFFLIVRDFGGFAQVTLNRKKTEKELF 64

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              K V  E V+ I+G V S S       II  Q+E+ ++  ++L      PL    +  
Sbjct: 65  ARVKKVPRESVVAIEGKVKSESKAPNGYEIIPNQMEVLSEASQVL------PLDTTEKVG 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   RF+DLR +   +  + R+ ++ ++R  +    FIE +TP + +++ EG   
Sbjct: 119 AELDTRLDARFMDLRIERTKQIFIIRSCVLKAIREFLDERGFIEINTPKIVSAATEGGTA 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S   + +F  L Q+PQ YKQ+LMASGFDR ++IAP FR E+  + +   E   +D+
Sbjct: 179 LFPISYFEREAF--LNQSPQLYKQMLMASGFDRVYEIAPIFRAEEHDTTKHLNEATSMDI 236

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN------------NFLRICYDDAI 283
           E++FV   +++  +E ++  V+ +  +   ++              F RI Y++AI
Sbjct: 237 EVAFVSDKEVMKILEELIVFVYSKIVDYPGLAKLNLQLPLEVPKIPFRRITYEEAI 292



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E+ASG  R H  E++ +   + G+S     + F      F+ GMPPH G   
Sbjct: 354 FDLMHPRVELASGSQRVHSYELLKRNIESKGLSA----DSFEFYLDTFRFGMPPHAGWGL 409

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           GIDR++M +L  +N+REV LFP
Sbjct: 410 GIDRLLMCMLEIENIREVVLFP 431


>gi|148643296|ref|YP_001273809.1| aspartyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|148552313|gb|ABQ87441.1| aspartyl-tRNA synthetase, AspS [Methanobrevibacter smithii ATCC
           35061]
          Length = 439

 Score =  127 bits (320), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 134/262 (51%), Gaps = 15/262 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RT+   ++     G  V + GWVH +R  GGIIF+ IRD  G  Q+ A     D+   E 
Sbjct: 10  RTNYTKNVTPDLTGQDVIVMGWVHEIRDLGGIIFVIIRDREGKVQITAPSKKVDAEILED 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            + +R E V+ I G V         AN     +E+  ++I +L++A + PLP+    +  
Sbjct: 70  IRKLRKESVVAIKGTVQE-------ANQAPTGVEIIPKEINLLNLANQ-PLPMDPTDKVK 121

Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             I  R   RF+DLRRD +      + R+ +++R       F+E +TP L AS+ EG  +
Sbjct: 122 AEIDTRLDSRFIDLRRDNVSAIFKIKNRMFHTIRDFFYENGFMEINTPKLVASATEGGTE 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               +   + +F  L Q+PQ YKQ++M+SG D+ F+I   FR E+  + R   E   +D 
Sbjct: 182 LFPITYFEKEAF--LGQSPQLYKQMMMSSGMDKVFEIGQIFRAEEHDTLRHLNEAVSIDA 239

Query: 240 EMSFVEQDDILNTMENVLRGVF 261
           E SF++  D++  + N+L  V 
Sbjct: 240 EASFMDDIDVMKILNNMLEQVI 261



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 4/86 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA  +DL+ N  E++SG  R H  +V+++     G++       FG   +AF+ GMPPH 
Sbjct: 350 KAHAFDLMYNNLELSSGATRVHQYDVLVKQIEEKGLNVA----SFGSYLKAFEYGMPPHA 405

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G DR+ M+L G +N+RE  LFP
Sbjct: 406 GWGVGADRLAMVLTGVENIRETVLFP 431


>gi|222445531|ref|ZP_03608046.1| hypothetical protein METSMIALI_01171 [Methanobrevibacter smithii
           DSM 2375]
 gi|261349911|ref|ZP_05975328.1| aspartate--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|222435096|gb|EEE42261.1| hypothetical protein METSMIALI_01171 [Methanobrevibacter smithii
           DSM 2375]
 gi|288860694|gb|EFC92992.1| aspartate--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 439

 Score =  127 bits (319), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 134/262 (51%), Gaps = 15/262 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RT+   ++     G  V + GWVH +R  GGIIF+ IRD  G  Q+ A     D+   E 
Sbjct: 10  RTNYTKNVTPDLTGQDVIVMGWVHEIRDLGGIIFVIIRDREGKVQITAPSKKVDAEILED 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            + +R E V+ I G V         AN     +E+  ++I +L++A + PLP+    +  
Sbjct: 70  IRKLRKESVVAIKGTVQE-------ANQAPTGVEIIPKEINLLNLANQ-PLPMDPTDKVK 121

Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             I  R   RF+DLRRD +      + R+ +++R       F+E +TP L AS+ EG  +
Sbjct: 122 AEIDTRLDSRFIDLRRDNVSAIFKIKNRMFHTVRDFFYENGFMEINTPKLVASATEGGTE 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               +   + +F  L Q+PQ YKQ++M+SG D+ F+I   FR E+  + R   E   +D 
Sbjct: 182 LFPITYFEKEAF--LGQSPQLYKQMMMSSGMDKVFEIGQIFRAEEHDTLRHLNEAVSIDA 239

Query: 240 EMSFVEQDDILNTMENVLRGVF 261
           E SF++  D++  + N+L  V 
Sbjct: 240 EASFMDDIDVMKILNNMLEQVI 261



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 4/86 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA  +DL+ N  E++SG  R H  +V+++     G++       FG   +AF+ GMPPH 
Sbjct: 350 KAHAFDLMYNNLELSSGATRVHQYDVLVKQIEEKGLNVA----SFGSYLKAFEYGMPPHA 405

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G DR+ M+L G +N+RE  LFP
Sbjct: 406 GWGVGADRLAMVLTGVENIRETVLFP 431


>gi|213400763|gb|ACJ47030.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 168

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 76/172 (44%), Positives = 105/172 (61%), Gaps = 9/172 (5%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           GEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +FL I Y DA+ +YG+DKP
Sbjct: 1   GEFYQLDLEMSFVTQEDIFQVIESTLYKVFAKFSR-KSVDEDFLHITYKDAMLKYGSDKP 59

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARS 350
           DLRNP+++ +VTE F  SEF +F    ++  G  V AIPA K     R+F D+  E A+ 
Sbjct: 60  DLRNPLLISDVTEIFRDSEFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEHAQK 117

Query: 351 Q-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
           + G  GL YI    D+ G     GP+AK L+     +I+   +++ GDS FF
Sbjct: 118 ELGAKGLGYI--TFDKDG--IAKGPIAKFLDDNRLNSIKEITNIEPGDSVFF 165


>gi|13541921|ref|NP_111609.1| aspartyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|62287583|sp|Q979P6|SYD_THEVO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|14325352|dbj|BAB60256.1| tRNA synthetase Asp [Thermoplasma volcanium GSS1]
          Length = 428

 Score =  127 bits (319), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 137/277 (49%), Gaps = 22/277 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + GW+  ++    + FL +RD  G  QV          + K +  E VL I G +  +
Sbjct: 18  VEIYGWLQDLKLLKNVSFLIMRDRTGTVQVTFKNTPDIVNLLKELPRESVLKISGKINKK 77

Query: 81  SAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
           S       +    +E+S + +E+L+ +E  LPLPV    +     R   RF+DLR+  + 
Sbjct: 78  S-------VSKSGLEVSGESVEVLNRSERPLPLPVIDPVQADLETRLNNRFIDLRKRDVS 130

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
                 + I+  +R  + ++ FIE  TP + A++ EG  D L P +  +   Y L Q+PQ
Sbjct: 131 SIFNAESSILWGIREFLHSQGFIEVHTPKIVAAATEGGAD-LFPVKYFENDAY-LNQSPQ 188

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            YK++LM+SGF++ F++ P FR E+  + R   EF  +D+EMSF + +D +  +EN ++ 
Sbjct: 189 LYKEILMSSGFEKVFEVGPAFRAEEHNTTRHLNEFTSIDIEMSFADHNDAMRILENAVKS 248

Query: 260 VFEEF--SNGNTVSNN----------FLRICYDDAIR 284
             E     NG  +  N          F RI Y + I+
Sbjct: 249 GIENMINENGKDLQENGINISIPEIPFPRITYKECIK 285



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 26/143 (18%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAF 480
           +EL II  N  +F +I ++P             +  PF TMP     ++  +        
Sbjct: 303 EELRIIGRNFKDFYFITEWPS------------SLRPFYTMPNRDDPTITNS-------- 342

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +DL     E+ SG  R H  +++L+ F+     K++  + F    +AF+ GMPPH G  
Sbjct: 343 -FDLQYREVEVTSGAQRVHDPDLLLKRFN----EKKLNIDSFKFYIQAFKYGMPPHAGWG 397

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            G++R+ M++LG  N+RE +LFP
Sbjct: 398 LGLERLTMIVLGLNNIRETTLFP 420


>gi|213400775|gb|ACJ47036.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Zootermopsis
           angusticollis]
 gi|213400777|gb|ACJ47037.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Zootermopsis
           nevadensis]
          Length = 168

 Score =  127 bits (318), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 77/172 (44%), Positives = 104/172 (60%), Gaps = 9/172 (5%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           GEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F RI Y +A+ +YG+DKP
Sbjct: 1   GEFYQLDLEMSFVTQEDIFQIIESTLYKVFAKFSR-KSVDKDFPRITYKEAMLKYGSDKP 59

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARS 350
           DLRNP+++ +VTE F  SEF +F    ++  G  V AIPA K     R+F D+  E A+ 
Sbjct: 60  DLRNPLLISDVTEIFRDSEFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEHAQK 117

Query: 351 Q-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
           + G  GL YI    D+ G     GP+AK LN      IR   +++ GDS FF
Sbjct: 118 EFGAKGLGYI--TFDKDGTAK--GPIAKFLNDNRLNHIREVTNVKPGDSVFF 165


>gi|288560271|ref|YP_003423757.1| aspartyl-tRNA synthetase AspS [Methanobrevibacter ruminantium M1]
 gi|288542981|gb|ADC46865.1| aspartyl-tRNA synthetase AspS [Methanobrevibacter ruminantium M1]
          Length = 440

 Score =  127 bits (318), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 141/297 (47%), Gaps = 28/297 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH   D+     G  V + GWVH +R  GGIIF+ IRD  G+ Q+ A     D+   E 
Sbjct: 10  RTHYSKDVNPDISGEEVIIMGWVHEIRDLGGIIFVIIRDRDGLVQITAPSKKVDAEILEE 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +++R E V+ I G V         A      +E+   K  IL+ A++ PLP+    +  
Sbjct: 70  LRALRKESVVAIKGTVQ-------EAGKAPNGVEIIPIKTTILNPAKQ-PLPMDPTEKVK 121

Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             I  R   RFLDLR+  +      +  +  ++R     +  IE +TP L AS+ EG  +
Sbjct: 122 AEIDTRLNSRFLDLRKANVSSIFKIKANMFKAVRQYFDEQGMIEINTPKLVASATEGGTE 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               +   + +F  L Q+PQ YKQ++M +GFD+ F+I   FR E+  + R   E   +D 
Sbjct: 182 LFPITYFEKEAF--LGQSPQLYKQMMMGAGFDKVFEIGQIFRAEEHDTLRHLNEAVSIDC 239

Query: 240 EMSFVEQDDILNTMENVLRGVFE-------------EFSNGNTVSNNFLRICYDDAI 283
           E+SF +  D++N ++ ++  V +             E+         F  + YDDA+
Sbjct: 240 EISFADDVDVMNVLDGMITRVLQSTKENCAKELETLEYDLSAIPEGPFPEVKYDDAV 296



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI+SG IR H  +++++      I +++  + FG   +AF+ GM PH G   
Sbjct: 355 FDLMYKNLEISSGSIRVHQYDLLVKQM----IERDLNPDGFGSYLKAFEYGMAPHAGWGV 410

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G DR+ M+L G +N+RE  LFP
Sbjct: 411 GADRLAMVLTGVENIRETVLFP 432


>gi|213400779|gb|ACJ47038.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Cordylochernes
           scorpioides]
          Length = 168

 Score =  127 bits (318), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 77/172 (44%), Positives = 103/172 (59%), Gaps = 9/172 (5%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           GEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V   F RI Y +A+ +YG+DKP
Sbjct: 1   GEFYQLDLEMSFVTQEDIFQVIESTLYKVFTKFSR-KSVDKGFPRITYKEAMLKYGSDKP 59

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARS 350
           DLRNP+++ +VTE F  SEF +F    ++  G  V AIPA K     R+F D+  E A+ 
Sbjct: 60  DLRNPLLISDVTEIFRDSEFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEHAQK 117

Query: 351 Q-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
           + G  GL YI    D+ G     GP+AK LN      IR   +++ GDS FF
Sbjct: 118 EFGAKGLGYI--TFDKDGTAK--GPIAKFLNDNRLNHIREVTNIKPGDSVFF 165


>gi|18977241|ref|NP_578598.1| aspartyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|22257052|sp|Q8U2G6|SYD_PYRFU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|18892906|gb|AAL80993.1| aspartyl tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 438

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 133/258 (51%), Gaps = 14/258 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RTH   ++     G  V+++GWV  V+  GGI F+ IRD  GI Q+ A       EI K 
Sbjct: 3   RTHYSNEITEELNGKRVKVAGWVQEVKDLGGIKFVWIRDREGIVQITAPKKKVSEEIFKL 62

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREY 120
              + SE V+ ++G+V       +   II        +K EIL+  +  LPL   G+ + 
Sbjct: 63  IPKLNSEDVVVVEGIVNFTPKAKLGFEII-------PEKFEILNRTQTPLPLDPTGKVKA 115

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RF+DLR   +      R+ +  ++R     E FIE  TP + A++ EG  + 
Sbjct: 116 ELDTRLDNRFIDLRNPKVMAIFKIRSNVFRAIREFFYNEGFIEIHTPKIIATATEGGTEL 175

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                    +F A  Q+PQ YKQ++MA+G D+ F+ AP FR E+  + R   E + +D E
Sbjct: 176 FPIKYFENDAFLA--QSPQLYKQIMMATGLDKVFETAPIFRAEEHNTTRHLNEAWSIDAE 233

Query: 241 MSFVE-QDDILNTMENVL 257
           ++F+E ++++++ +EN++
Sbjct: 234 IAFIENEEEVMDVLENLV 251



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL   G EI+SGG R H  EV+L+     G++ E     F    +AF+ GMPPHGG   
Sbjct: 353 FDLEYRGIEISSGGQREHRYEVLLEQIKEKGLNPE----SFEFYLKAFKYGMPPHGGFGL 408

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++M +L   N+REV LFP
Sbjct: 409 GAERLIMRMLNIGNIREVILFP 430


>gi|134046818|ref|YP_001098303.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|166225358|sp|A4G0V5|SYD_METM5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|132664443|gb|ABO36089.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 438

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 139/296 (46%), Gaps = 27/296 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH   ++     G  V L GWVH +R  G + F+ +RD  G  Q V      D   F I
Sbjct: 9   RTHYSEEVIPEMDGQEVILMGWVHSIRALGKLAFVILRDREGTIQAVVPKQKVDEETFAI 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK +  E ++ I G V++      N     G  E+   +I +L+ A+  PLP+    +  
Sbjct: 69  AKKLGKEDIIAIRGKVVA------NEKAPKG-FEVIPIEIRVLNKAD-APLPLDPSEKVA 120

Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             I  R   RFLD+RR  +      R+ ++ S+R       F+E +TP L AS+ EG  +
Sbjct: 121 AEIDTRLDKRFLDIRRPKIQAIFKIRSEMLRSIRKTFADGGFVEVNTPKLVASATEGGTE 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S   + +F  L Q+PQ YKQ++MA GFD+ F+IA  FR E+  + R   E   +D 
Sbjct: 181 LFPISYFEKEAF--LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDT 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAI 283
           EMSFV + D +  +E V+   + +              N       F +I Y +AI
Sbjct: 239 EMSFVNEKDAMAMLEKVVYNCYADIEYNRPQEIELLELNWEIPEKTFDKITYTEAI 294



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI+SG  R H  +++++  SN+G++     + F     AF+ GMPPH G   
Sbjct: 353 FDLMYKELEISSGAQRVHKYDLLVENISNMGMNP----DSFETYLEAFKFGMPPHAGWGL 408

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G DR  M+L    N+RE  LFP
Sbjct: 409 GADRFAMVLTAQDNIRECVLFP 430


>gi|294495524|ref|YP_003542017.1| aspartyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292666523|gb|ADE36372.1| aspartyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 443

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 139/295 (47%), Gaps = 24/295 (8%)

Query: 5   RTHSCGDLGVSDVGS-FVRLSGWVHRVRPHGGIIFLDIRDHYG---ITQVVANPDSACFE 60
           RTH    +    +G   V L+GWVH VR  GGI F+ +RD  G   +T V    D   F 
Sbjct: 7   RTHYTTQIDPGKIGDDKVALAGWVHEVRDLGGICFVVLRDRQGRAQVTLVKKKIDRELFN 66

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +  E V+ + G +           +I  +IEL      +      LPL   G+ + 
Sbjct: 67  FARKLIRESVISVRGSIKPEEKAPNGYELIPDEIEL------LNEADSPLPLDTTGKVDA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RF+DLRR   +     R  +++++R  +  + F+E S+P + A++ EG    
Sbjct: 121 ELDTRLDSRFIDLRRSRTNAIFRIRHEVLHAVRNYLANDGFLETSSPKVVATATEGGTAL 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +  ++ +F  L Q+PQ +KQ+LM+ G DR F+I P FR E+  + R   E   +D+E
Sbjct: 181 FPITYFDREAF--LNQSPQLFKQILMSGGMDRVFEIGPIFRAEEHDTRRHLNEATSIDIE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
            SFV+  D++  +EN++  V+ +                      FL++ Y +AI
Sbjct: 239 ASFVDHFDVMEILENMVEYVYNQVIENVPDALEVLGIELKVPKTPFLKLTYQEAI 293



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D++    E++SG  R H+ E++    ++ G+  E     F    RAF  GMPPH G   
Sbjct: 358 FDMMHRTMELSSGAQRIHVPEMLKNRIADQGLDPE----GFDFYLRAFSYGMPPHSGWGL 413

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R VM +LG +N+R+V LFP
Sbjct: 414 GCERFVMTMLGVENIRDVVLFP 435


>gi|282163375|ref|YP_003355760.1| aspartyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155689|dbj|BAI60777.1| aspartyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 434

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 27/296 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+  +  GS V ++GWVH +R  GG+ FL +RD  G+ QV         EI  +
Sbjct: 3   RTHYSRDITPAMNGSTVTVNGWVHEIRDFGGLAFLILRDREGLVQVTMPKKKVSKEIVDT 62

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           V+    E V+ + G V +               EL    +E+LS A+  PLP+    + P
Sbjct: 63  VKGLSRESVVSVTGDVKAMEK-------APNGYELIPTALEVLSRADA-PLPLDPTGKVP 114

Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R   RF+DLR   +      R  +I ++R  + ++  +E ++P + A++ EG  +
Sbjct: 115 AELDTRLDSRFMDLRSPEVTAVFYVRANMIKAIRDYLSSQGCLEIASPKIVATATEGGTE 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S   + +F  L Q+PQ YKQ++MA G DR ++I P FR E+  + +   E   +D+
Sbjct: 175 LFPISYFEREAF--LNQSPQLYKQMMMAGGMDRVYEIGPIFRAEEHATRKHLNEATSIDV 232

Query: 240 EMSFVEQDDILNTMENVLRGVF---EEFSNGNTVSNN---------FLRICYDDAI 283
           E+SF   +D +  +EN +   +   +E         N         F R+CY DAI
Sbjct: 233 ELSFATDEDAMRLLENTIAYAYAYVKEHCQAQLKVLNVDLQVPKTPFRRLCYRDAI 288



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 6/92 (6%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND    KAF  DL+    E++SG  R +    +++     G+S E     F     +F+ 
Sbjct: 341 NDPSICKAF--DLMHPRMELSSGAQREYRYAELVKKMEEKGLSPE----SFKFYLDSFRY 394

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPPH G   G +R++  +L   N+RE  LFP
Sbjct: 395 GMPPHAGWGLGAERLLQTMLNLNNIREAVLFP 426


>gi|48478286|ref|YP_023992.1| aspartyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|62287564|sp|Q6KZQ3|SYD_PICTO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|48430934|gb|AAT43799.1| aspartyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 423

 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 138/277 (49%), Gaps = 23/277 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V LSGW   +R    I+F+ +RD  G  QV V + +   F+    +  E VL + G V  
Sbjct: 14  VELSGWAEDIRRIKSIVFIILRDVTGRIQVTVKSENVKNFDEVYKINRESVLKVHGTVDH 73

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           +S            IE+ A  +EIL+ AE  LPL V  + +     R   R++DLR+D  
Sbjct: 74  QSRSK-------SGIEIIADSVEILNAAEAPLPLGVVDKVQADLDTRLNNRYIDLRKDEN 126

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                 ++ ++  +R  +    FIE  TP + A++ EG  D L P +  +   Y L Q+P
Sbjct: 127 LIIFKAQSTLLWGIREYLNRLGFIEVHTPKIVAAATEGGAD-LFPVKYFERDAY-LNQSP 184

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           Q YK++LMA+GF++ F++ P FR E   + R   EF  +D+EMSF + +D+++ +EN ++
Sbjct: 185 QLYKEILMAAGFEKVFEVGPAFRAEKENTLRHLNEFTSIDIEMSFADHNDVMDVLENTVK 244

Query: 259 GVFEEFSNG------------NTVSNNFLRICYDDAI 283
                  N             ++++    RI Y +AI
Sbjct: 245 NAINTLKNNLGDELNKHGFNIDSINGRIPRITYREAI 281



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL     EI SG  R H  + ++    N G++ E     F     AF+ GMPPH G A 
Sbjct: 338 FDLQLRELEICSGAQRIHRYDDLVNNIKNKGLNPE----SFTFYLSAFRYGMPPHAGWAI 393

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ M LLG KNVRE +LFP
Sbjct: 394 GLERLTMNLLGIKNVRETTLFP 415


>gi|213400759|gb|ACJ47028.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Nasonia
           vitripennis]
          Length = 168

 Score =  123 bits (309), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 75/172 (43%), Positives = 104/172 (60%), Gaps = 9/172 (5%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           GEFYQLD+EMSFV Q+DI + +E+ L  VF +FS   +V  +F RI Y +A+ +YG+DKP
Sbjct: 1   GEFYQLDLEMSFVTQEDIFDVIESALYKVFAKFSR-KSVDKDFPRITYKEAMLKYGSDKP 59

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARS 350
           DLRNP+++ +VTE F  S F +F    ++  G  V AIPA K     R+F D+  E A+ 
Sbjct: 60  DLRNPLLISDVTEIFRDSGFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEHAQK 117

Query: 351 Q-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
           + G  GL YI    D+ G     GP+AK L+      IR   +++ GDS FF
Sbjct: 118 EFGAKGLGYI--TFDKDGTAK--GPIAKFLDENRLNHIREATNIEPGDSVFF 165


>gi|213400767|gb|ACJ47032.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Dirofilaria
           immitis]
          Length = 168

 Score =  123 bits (309), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 75/172 (43%), Positives = 101/172 (58%), Gaps = 9/172 (5%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           GEFYQLD+EMSFV Q+DI   +E  L  VF +FS   +V  NF R+ Y +A+ +YG+DKP
Sbjct: 1   GEFYQLDLEMSFVTQEDIFQVIETTLYKVFTKFS-CKSVDKNFPRLTYKEAMLKYGSDKP 59

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARS 350
           DLRNP+ + +VTE F  S F +F    ++  G  V AIPA K     R+F D+  E A+ 
Sbjct: 60  DLRNPLSISDVTEVFRDSGFNIFKS--NIQQGMVVRAIPAPKTARKPRSFFDKKIEHAQK 117

Query: 351 Q-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
           + G  GL YI    D+ G +   GP+AK  N      IR   +++ GDS FF
Sbjct: 118 EFGAKGLGYI--TFDKDGTIK--GPIAKFFNDNKLNHIREVTNIKPGDSIFF 165


>gi|298675477|ref|YP_003727227.1| aspartyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298288465|gb|ADI74431.1| aspartyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 443

 Score =  123 bits (309), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 141/309 (45%), Gaps = 27/309 (8%)

Query: 1   MHRYRTHSCGDLGVSDVG-SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDS 56
           M + RTH   D+   ++    V L+GWVH VR  GGI F+ +RD  G+ QV       DS
Sbjct: 3   MEKLRTHHTRDIEPEEMADKSVTLAGWVHEVRDLGGICFVVLRDREGMAQVTLVKKKVDS 62

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  AK +  E V+ + G V           ++   I +  +          LPL   G
Sbjct: 63  DFFNKAKKLMRESVISVTGTVKPEEKAPNGYEVLPDDITVLNES------CTPLPLDTTG 116

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           + E         R++DLR+         R  ++ ++R     E FIE +TP + A++ EG
Sbjct: 117 KVEAEMDTCLDSRYVDLRKPRTSAIFKIRHEVLKAVRDNFTREGFIETTTPKVVATATEG 176

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                  +  ++ +F  L Q+PQ +KQ+LM+ G ++ F+I P FR E+  + R   E   
Sbjct: 177 GTSLFPITYFDREAF--LNQSPQLFKQILMSGGLEKVFEIGPIFRAEEHDTRRHLNEATS 234

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------RICYDDA-- 282
           +DME SF +  DI+ T+EN +   + +     +    +L            R+ Y +A  
Sbjct: 235 IDMESSFSDHFDIMETLENTIAHAYSQVKENASQQLEYLGIDLEVPETPFKRLTYSEAID 294

Query: 283 -IRRYGTDK 290
            I +YG ++
Sbjct: 295 IINQYGKEE 303



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D++    E++SG  R H  +++     N G+      + F     AF+ GMPPH G   
Sbjct: 358 FDMMHTRLELSSGAQRIHYYDMLKNRIENQGLDP----DSFDFYLDAFRYGMPPHAGWGL 413

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++M +LG +N+REV LFP
Sbjct: 414 GCERLLMTMLGLENIREVVLFP 435


>gi|193083965|gb|ACF09640.1| asparaginyl-tRNA synthetase [uncultured marine crenarchaeote
           AD1000-56-E4]
          Length = 436

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 146/294 (49%), Gaps = 21/294 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H   DL  S  GS V + GW+  +R HG I FL + D  G  Q+VA   ++  ++ +S
Sbjct: 11  RSHYSKDLDASMEGSDVTIMGWISSIRGHGNITFLTLVDKMGAIQIVAKKGTSPDDLVQS 70

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +         GL+ +        N     IE+S + + I S  E++P P     +  ++I
Sbjct: 71  ISKLKEHSSIGLIGTVKTSEKAPN----GIEISPKDLRIFSSVEKIP-PFDPHAKTVKNI 125

Query: 125 --RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R + R +DLRR+TL +    R+ ++ S+R      NF E +TP + A++ EG      
Sbjct: 126 DTRLEIRAIDLRRNTLQQVFKARSNVLKSIRQYFYDHNFTEINTPKMIATATEGGAALFP 185

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
               N+ +F  L Q+PQ YK+ L  S F++ F+IAP FR E  R++R   E   +D E +
Sbjct: 186 IFYYNKEAF--LAQSPQLYKEQLTMS-FEKVFEIAPIFRAEPSRTNRHLSEAISIDFEEA 242

Query: 243 FVEQDDILNTMENVLRG---VFEEFSNGN--------TVSNNFLRICYDDAIRR 285
           +V+ +D+++ +  +++      +EFS  N         +S+   +  Y D + +
Sbjct: 243 YVDYNDVMSRIGQIIKQTILTMQEFSKDNDDVEFTIPEISDTIPQYTYSDLLEK 296



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E++SG  R      +     N G+  +     FG     F  G+PPH G   
Sbjct: 351 FDLMYGDLELSSGSTRIAKKSELEDRMKNKGMKIDT----FGYHLGVFDYGVPPHAGCGI 406

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++M L G  N+R+ + +P
Sbjct: 407 GLERLMMALTGIDNIRDTTFYP 428


>gi|213400765|gb|ACJ47031.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Tribolium
           confusum]
          Length = 168

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 74/172 (43%), Positives = 104/172 (60%), Gaps = 9/172 (5%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           GEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F RI Y +A+ +YG+DKP
Sbjct: 1   GEFYQLDLEMSFVTQEDIFQVIESTLYKVFAKFSR-KSVDKDFPRITYKEAMLKYGSDKP 59

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARS 350
           DLRNP+++ +VTE F  SEF +F    ++  G  V AIPA K     R+F D+  E  + 
Sbjct: 60  DLRNPLLISDVTEIFRDSEFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEHTQK 117

Query: 351 Q-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
           + G  GL YI    D+ G     GP+AK L+     +I+   +++ GDS FF
Sbjct: 118 EFGAKGLGYI--TFDKDG--IAKGPIAKFLDDNRLNSIKEITNIEPGDSVFF 165


>gi|213400757|gb|ACJ47027.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Nasonia
           longicornis]
          Length = 168

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 75/172 (43%), Positives = 103/172 (59%), Gaps = 9/172 (5%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           GEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F RI Y +A+ +YG+DKP
Sbjct: 1   GEFYQLDLEMSFVTQEDIFQIIESTLYRVFAKFSR-KSVDKDFPRITYKEAMLKYGSDKP 59

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARS 350
           DLRNP+++ +VTE F  S F +F    ++  G  V AIPA K     R+F D+  E A+ 
Sbjct: 60  DLRNPLLISDVTEIFRDSGFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEHAQK 117

Query: 351 Q-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
           + G  GL YI    D+ G     GP+AK L+      IR   +++ GDS FF
Sbjct: 118 EFGAKGLGYI--TFDKDGTAK--GPIAKFLDENRLNHIREATNIEPGDSVFF 165


>gi|91772787|ref|YP_565479.1| aspartyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121684432|sp|Q12XU7|SYD_METBU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91711802|gb|ABE51729.1| Aspartyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 443

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 136/278 (48%), Gaps = 14/278 (5%)

Query: 5   RTHSCGDLGVSDVGS-FVRLSGWVHRVRPHGGIIFLDIRDHYG---ITQVVANPDSACFE 60
           RTH    + +  +G   V + GWVH VR  GGI F+ +RD  G   IT V    D   F+
Sbjct: 7   RTHYTSQIDIEQIGDDKVTVCGWVHEVRDLGGICFVVVRDREGRAQITLVKKKIDKEIFD 66

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119
            A+ +  E ++ + G   +         II        + I +L+ AE  LP+   G+ +
Sbjct: 67  AARKLVRESIVAVTGTAKAEGKAPNGYEII-------PESIVVLNEAESPLPMDTTGKVD 119

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   RF+DLRR+        R  ++ ++R  +  + +IE  +P + A++ EG   
Sbjct: 120 AELDTRLDSRFMDLRRERTTAIFKIRHEVLRAVRDFLSKDGYIETCSPKVVATATEGGTS 179

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               +  ++ +F  L Q+PQ +KQ+LM+ G D+ F+I P FR E+  + R   E   +D+
Sbjct: 180 LFPITYFDREAF--LNQSPQLFKQILMSGGLDKVFEIGPIFRAEEHDTRRHLNEATSIDI 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E SF++  D++  +E+++  V+E+       S   L I
Sbjct: 238 EASFLDHFDVMEVLEDMVAYVYEQVIENEAASLKALDI 275



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D++    E++SG  R H+ +++     + G+      + F    RAF+ GMPPH G   
Sbjct: 358 FDMMHRTMELSSGAQRIHIHDMLKARIESQGLDS----DGFDFYLRAFKYGMPPHSGWGI 413

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R+VM +L  +N+R+  LFP
Sbjct: 414 GCERLVMTMLSVENIRDTVLFP 435


>gi|288931892|ref|YP_003435952.1| aspartyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894140|gb|ADC65677.1| aspartyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 429

 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 142/292 (48%), Gaps = 27/292 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSV 65
             ++   D G  V L GW+H VR  GG++F+ +RD  G  Q+           FE AK+V
Sbjct: 5   TSEISEEDFGKKVTLYGWIHEVRDLGGLVFVVLRDREGFAQITLPKKKVKQEVFERAKNV 64

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI- 124
           R E       +V              G  E+  ++ E+L+ A+  PLP+    + P  + 
Sbjct: 65  RRE------SVVKVVGEVKKEERAPNG-FEIIPEEFEVLNEAD-APLPLDVTEKVPAELD 116

Query: 125 -RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +RFLDLR+  +      R+ ++N+ R       FIE +TP + +++ EG  +    
Sbjct: 117 TRLDHRFLDLRKHRVFAIFRVRSEVLNATREFFHERGFIEVNTPKIVSTATEGGTELFPI 176

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +   + +F  L Q+PQ YKQ LMA+GFDR F+I P FR E+  + R   E   +D+E+SF
Sbjct: 177 TYFEREAF--LNQSPQLYKQTLMAAGFDRVFEIGPIFRAEEHNTVRHLNEATSIDIEVSF 234

Query: 244 VEQDDILNTMENVLRGVF-------EEFSNGNTVS-----NNFLRICYDDAI 283
            + + ++  +E ++  +        E++ N   V        F RI YD+A+
Sbjct: 235 TDHNGVMKYLEELIVYIHERVVENCEKYLNWLNVKLEVPEKPFERITYDEAL 286



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E+ASG  R H  +++++     G+  E     FG    AF+ GMPPH G   
Sbjct: 344 FDLMKGWLELASGAQRIHKYDLLVERIKAQGLDPE----SFGFYLEAFRYGMPPHAGWGL 399

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++M +L  KN+RE  LFP
Sbjct: 400 GVERLLMAMLDLKNIREAVLFP 421


>gi|330507681|ref|YP_004384109.1| aspartyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928489|gb|AEB68291.1| aspartyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 434

 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 129/261 (49%), Gaps = 13/261 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           RTH  G +     G  V L+G+ H +R  GGI FL +RD  G+ Q+           F++
Sbjct: 4   RTHYSGQISADMDGKEVMLAGFAHEIRDLGGIAFLVLRDREGMAQITLVKKLLGKDVFKM 63

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A+S+  E V+ + G V + +       I+  +I+       +LS A+  LPL    + E 
Sbjct: 64  ARSISRESVVMVRGNVKAEAKAPRGYEILPTEIQ-------VLSAAQVPLPLDPTEKVEC 116

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RF+D+RR  +       + ++ S+R     +  +E  TP + A++ EG  D 
Sbjct: 117 ELDTRLDSRFMDIRRPCVLAAFEIESAVLCSLRDYFHKKGIVEVFTPKIVAAATEGGTDL 176

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S   + +F  L Q+PQ YKQ+LM +G DR ++I P FR E+  + R   E   +D+E
Sbjct: 177 FPISYFEKEAF--LNQSPQLYKQMLMGAGMDRVYEIGPIFRAEEHDTRRHLNEAISIDLE 234

Query: 241 MSFVEQDDILNTMENVLRGVF 261
           +SF +  D++  +E  + G +
Sbjct: 235 VSFADDKDVMEILEEAVAGAY 255



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E+ASG  R H   ++++     G+      + F    RAF+ GMPPH G   
Sbjct: 349 FDLMHPRMELASGAQRVHDYSLLVERIKEKGLDP----DGFEFYLRAFRYGMPPHAGWGL 404

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+ R+VM +L  +N+R+  +FP
Sbjct: 405 GLSRLVMTMLNLENIRDAVIFP 426


>gi|297620027|ref|YP_003708132.1| aspartyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297379004|gb|ADI37159.1| aspartyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 438

 Score =  121 bits (303), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 139/296 (46%), Gaps = 27/296 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61
           RTH   ++        V L GWVH +R  G + F+ +RD  G  Q+V          FEI
Sbjct: 9   RTHYSKEVVAEMNEQEVVLMGWVHSIRALGKLAFVILRDREGTIQLVVPKQKVSEETFEI 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK +  E V+ + G V++         II  +I +  +           PLP+    + P
Sbjct: 69  AKKLGKEDVVAVKGKVVASEKAPNGFEIIPIEIRVLTKS--------NAPLPLDPAEKVP 120

Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             I  R  +RFLD+RR  +      R  ++ S+R       FIE +TP L AS+ EG  +
Sbjct: 121 ADIDTRLDHRFLDIRRPKIQALFKIRAEMLKSVRNTFNDNGFIEVNTPKLVASATEGGTE 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S   + +F  L Q+PQ YKQ++MA GFDR F+IA  FR E+  + R   E   +DM
Sbjct: 181 LFPISYFEKEAF--LGQSPQLYKQMMMAGGFDRVFEIAQIFRAEEHNTRRHLNEAVSIDM 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAI 283
           EMSF ++ D ++ +E V+   +++ +            N       F ++ Y +A+
Sbjct: 239 EMSFSDEYDAMDILEKVVYNSYKDIAENRADEIETLGINFEVPDKKFTKLTYSEAV 294



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI SG  R H  +++++  S +G++ E     FG    AF+ GMPPH G   
Sbjct: 353 FDLMYKELEITSGAQRVHKYDLLVENISKMGMNPE----GFGTYLEAFEYGMPPHAGFGL 408

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G DR  M+L   +N+RE  LFP
Sbjct: 409 GADRFAMILGQEENIRECVLFP 430


>gi|43085|emb|CAA37932.1| tls [Escherichia coli K-12]
          Length = 209

 Score =  120 bits (301), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 3/205 (1%)

Query: 390 RLDMQDGDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEE 448
           R   QDGD  FF A D  K  + A  A R  + ++LG+ + + +   W++DFP +E ++ 
Sbjct: 2   RTAAQDGDMIFFGA-DNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFE-DDG 59

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H  ++    F
Sbjct: 60  EGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVF 119

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +   
Sbjct: 120 GILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAA 179

Query: 569 CDLLMGSPSTVSVEQLRELGLRIVE 593
             L+  +PS  +   L EL +++V+
Sbjct: 180 ACLMTEAPSFANPTALAELSIQVVK 204


>gi|213400773|gb|ACJ47035.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Coptotermes
           acinaciformis]
          Length = 168

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 75/172 (43%), Positives = 103/172 (59%), Gaps = 9/172 (5%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           GEFYQLD+EMSFV Q+DI + +E+ L  VF +FS   +V  +F RI Y +A+ +YG+DKP
Sbjct: 1   GEFYQLDLEMSFVTQEDIFDIIESALYKVFAKFSR-KSVDKDFPRITYKEAMLKYGSDKP 59

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARS 350
           DLRNP+++ +VTE F  S F +F    ++  G  V AIPA K     R+F D+  E A+ 
Sbjct: 60  DLRNPLLISDVTEIFRDSGFNIFKS--NIERGMVVRAIPAPKTVEEPRSFFDKRIEHAQK 117

Query: 351 Q-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
           + G  GL YI    D+ G     GP+AK L+      IR   + + GDS FF
Sbjct: 118 EFGAKGLGYI--TFDKDGTAK--GPIAKFLDDDRLNRIREITNTEPGDSVFF 165


>gi|257389083|ref|YP_003178856.1| aspartyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257171390|gb|ACV49149.1| aspartyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 432

 Score =  120 bits (300), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 157/349 (44%), Gaps = 46/349 (13%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEIAKSVRSEWVL 71
           ++ G  V ++GWVH VR  GGI FL +RD  G  QV   V   D    E   +V  E V+
Sbjct: 10  AEPGDTVTVAGWVHEVRDLGGIAFLILRDTTGKIQVKFEVEEMDDDLVETGLNVHRESVI 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130
            + G V             TG +E++   ++++S A+ ELPL   G+ +   S R   R 
Sbjct: 70  SVTGDVEEEP------RAPTG-VEVTPASVDVISEADPELPLDPSGKVDAELSTRLDNRT 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LDLR+D +      R  ++ ++R +       E +TP + A+  EG  +    +   Q +
Sbjct: 123 LDLRKDEVKAIFEIRAEVLRAVREQFRELGCTEINTPKIVATGTEGGTELFPITYFGQEA 182

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  + Q+PQ +KQL++ SG +R F+I P FR E+  + R   E   +D E +F +  + +
Sbjct: 183 F--MNQSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFESAFADHTEAM 240

Query: 251 NTMENVLRGVFEEFSNG--------------NTVSNNFLRICYDDAIRR----------- 285
           +  E V++  +E                        +F R+ Y++AI R           
Sbjct: 241 DACEAVVKAAYEAVEENCQDELVALDLADEFEAPEGDFPRLTYEEAIERINATGELDEPL 300

Query: 286 -YGTDKPDLRNPIIMHNVTEHFVHSE-------FRVFSKILSVNPGYEV 326
            +G D P      +  +V EH+  ++       F +  K   V+ G+++
Sbjct: 301 VWGDDLPTEGEHALGQDVGEHYFITDWPSEIKPFYIMDKDDEVSTGFDM 349



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D++    E+ SGG R H  + ++  F   G+  E     F    + F+ GMPPH G   
Sbjct: 347 FDMMHPEMELVSGGQREHRYDHLVDGFEQQGLDPEA----FDYYTKMFKYGMPPHAGWGL 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++M +LG  N+RE  LFP
Sbjct: 403 GGERLIMTMLGLGNIREAVLFP 424


>gi|322368673|ref|ZP_08043240.1| aspartyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320551404|gb|EFW93051.1| aspartyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 436

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 134/269 (49%), Gaps = 14/269 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RT+S  D+     G  V ++G VH +R  GG+ F+ +RD  G TQVV     D   FE A
Sbjct: 4   RTYS-DDITAEQDGETVSIAGHVHDIRDLGGLSFVIVRDREGQTQVVFKEGNDEDLFEAA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121
             +  E V+ I G V +       ++   G +EL   ++E+++ AE  LP+ V  + E  
Sbjct: 63  NDLGKEDVVRITGSVKA-------SDQAPGGVELMPSELEVINAAESPLPMEVAKDIESD 115

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            S R   R +DLR+   +     R++++N+M      E F    TP+L+    EG  + L
Sbjct: 116 LSTRLDNRSIDLRKPEAYAVFSLRSKLVNAMEEWFDGEGFRNVDTPLLSQEGAEGGAE-L 174

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
            P  V  G    L Q+PQ YKQ+LMA+GFD+ ++    FR E   + R   E    D+E+
Sbjct: 175 FPV-VYYGEEVFLSQSPQLYKQMLMAAGFDKIYETGTAFRAEAFATSRHVSEISMFDVEL 233

Query: 242 SFV-EQDDILNTMENVLRGVFEEFSNGNT 269
           +++ +  D+++  E  LR   E  S   T
Sbjct: 234 AYIDDHHDVMDVQEESLRHTLERVSENAT 262



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
           + + G+D+ S K   +DL+  G E++SGG R H  E M +   + G   E     F    
Sbjct: 339 QDVPGDDIASRK---FDLIYKGQELSSGGQREHDIETMSEYMEDQGADPE----NFHFYL 391

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            AF+ G+PPHGG   GIDR+V  +    N++E  LFP
Sbjct: 392 EAFRFGIPPHGGYGLGIDRLVQKVGELDNIKEAILFP 428


>gi|313127269|ref|YP_004037539.1| aspartyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312293634|gb|ADQ68094.1| aspartyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 434

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 148/322 (45%), Gaps = 39/322 (12%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVL 71
           ++ G  V ++GWVH VR  GGI FL +RD  G  Q+    D    E+ ++   V  E V+
Sbjct: 10  AEPGDSVTVAGWVHEVRDLGGIAFLILRDKSGKIQIKLEKDEMDEELVETGLDVARESVV 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130
            + G V             TG +E+  + I++++ A+ +LPL   G+ +   S R   R 
Sbjct: 70  SVSGDVKE------EPRAPTG-VEVVPEDIDVMAEADTQLPLDPSGKVDAELSTRLDNRT 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LDLR+D +      R  I+ S+R      N  E +TP + A+  EG  +    +   Q +
Sbjct: 123 LDLRKDEVKAVFEIRAEILRSVRDAFRGLNATEINTPKIVATGTEGGTELFPITYFGQEA 182

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  + Q+PQ +KQL++ SG +R F++ P FR E+  + R   E   +D E +F +  + +
Sbjct: 183 F--MNQSPQLFKQLMVGSGLERVFEVGPIFRAEEHNTPRHLNEATSIDFESAFFDHTEAM 240

Query: 251 NTMENVLRGVFEEFSNG--------------NTVSNNFLRICYDDAIRR----------- 285
           +  E+V++  +E  +                      F R+ Y++AI R           
Sbjct: 241 DACEHVVKAAYEGVAENCQRELETLGLAEEFEVPEGEFPRLTYEEAIERINATGELDEQL 300

Query: 286 -YGTDKPDLRNPIIMHNVTEHF 306
            +G D P      +  +V EH+
Sbjct: 301 VWGDDLPTEGERALGEDVGEHY 322



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 4/95 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +K +D     +  +D++    E+ SGG R H  E ++  F   G+      ++F    + 
Sbjct: 336 IKDHDDDETLSTGFDMMHPRMELVSGGQREHRFEHLVAGFEQQGLDP----DQFEYYTKM 391

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           F+ GMPPH G   G +R+VM +LG  N+RE  LFP
Sbjct: 392 FKYGMPPHAGWGLGGERLVMTMLGLDNIREAVLFP 426


>gi|154149654|ref|YP_001403272.1| aspartyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|153998206|gb|ABS54629.1| aspartyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 430

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 135/287 (47%), Gaps = 26/287 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWV 70
           V+       + GWVH  R  GG+ F  IRD  GI QV         E+   AK V  E V
Sbjct: 8   VTPQSGHAEICGWVHEERDLGGLAFFLIRDRTGIIQVTIPKKKVSEEVLLAAKKVSRESV 67

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYR 129
           + I G V +            G  E+   K EI+++AE  LPL V  +       R   R
Sbjct: 68  VRIAGTVKA-------VEKAPGGREIVPDKFEIINLAETPLPLDVSEKVGVELDTRLDAR 120

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           FLD+RR  +      R+  + ++   +  E FI  +TP + A++ EG  +    +  ++ 
Sbjct: 121 FLDVRRPRVAAVFQIRSAALFAVNEFLHKEGFISITTPKIVAAATEGGTELFPIAYFDKE 180

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +F  L Q+PQ YKQ++MA GF++ ++I P FR E+  + +   E   +D+E+SF +  D+
Sbjct: 181 AF--LNQSPQLYKQMMMAGGFEKVYEIGPIFRAEEHNTTKHLNEATSIDIEVSFADHHDV 238

Query: 250 LNTMENVLRGVFE-------------EFSNGNTVSNNFLRICYDDAI 283
           + T+E+++   +E             E  N       F R+ Y +AI
Sbjct: 239 MKTLEHLIVTTYEYVNKTCSTQIANLEIDNFAVPKAPFTRLPYGEAI 285



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 34/163 (20%)

Query: 403 AGDPLKFCS-FAADARNHIAQELGIINCNCFEFCWIMDF-PFYEWNEEEKKIDFAHNPFT 460
           +G+P+K+    +A A + I  E+G    + F   W  +  P+Y    E            
Sbjct: 292 SGEPIKYGDDISAAAEHAIGDEMG---AHYFIVDWPTEIRPYYAMPYE------------ 336

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
                      +D    KAF  DL+    E++SG  R H  ++++Q     G++ E    
Sbjct: 337 -----------DDPSICKAF--DLMHPRMELSSGAQRVHQYDLLVQQIKKKGLNPE---- 379

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            F    R F+ GMPPH G   G +R++M +LG  NVRE  LFP
Sbjct: 380 SFEFYLRPFRYGMPPHAGWGLGAERLIMTMLGLSNVREAVLFP 422


>gi|213852618|ref|ZP_03382150.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 164

 Score =  118 bits (296), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 98/165 (59%), Gaps = 3/165 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+ LPL         E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLD--ANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPM 164


>gi|124484868|ref|YP_001029484.1| aspartyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|166225357|sp|A2SPG1|SYD_METLZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|124362409|gb|ABN06217.1| aspartyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 429

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 28/280 (10%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLVM 78
           R++GWVH  R  GG+ FL +RD  GI QV         E+  +V+    E V+  +G+V 
Sbjct: 16  RIAGWVHEERDLGGLTFLLVRDRTGILQVTIPKKKVTPEVLAAVKEATRESVIECEGVVK 75

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLDLRRD 136
           +            G  EL    + ++S AE  PLP+    + P  +  R   R+LDLR+ 
Sbjct: 76  ATEK-------APGGRELVPDMLRVVSRAE-TPLPLDVSEKVPAELDTRLDNRYLDLRKP 127

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            ++     R   + ++   +    F +  TP + A++ EG  +    +  ++ +F  L Q
Sbjct: 128 RINAIFQIRNACLRAISEYLWDNGFTQVQTPKIVAAATEGGTELFPLAYFDKEAF--LNQ 185

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ YKQ+LM++GFDR F+I   FR E+  + R   E   +D+EMSF  ++D ++ +ENV
Sbjct: 186 SPQLYKQMLMSAGFDRVFEIGAIFRAEEHNTVRHLNEATSIDIEMSFANEEDAMHVLENV 245

Query: 257 LRGVFEEFSN--GNTVSN-----------NFLRICYDDAI 283
           +   ++  ++  G+ ++             F RI Y +AI
Sbjct: 246 VASAYQYVADHCGDALATLGITDFKVPTVPFPRITYKEAI 285



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D++    E+ SG  R H+  ++++     G++ +  E         F+ GMPPH G   
Sbjct: 344 FDMMHPRMELTSGAQRCHIHSLLVEQIKAKGLNPDAFEFYLN----PFRYGMPPHAGWGL 399

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+VM +L  +N+RE  LFP  ++
Sbjct: 400 GAERLVMTMLDLQNIREAVLFPRDRH 425


>gi|305662513|ref|YP_003858801.1| aspartyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304377082|gb|ADM26921.1| aspartyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 435

 Score =  118 bits (295), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 151/318 (47%), Gaps = 37/318 (11%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60
           Y+T  C D+    VGS V L+GWVH++R  GG  F+ +RD  G  Q+  + DS      +
Sbjct: 5   YKTVQCKDIVKDMVGSSVVLAGWVHQIRDLGGKKFIILRDGSGFVQITISKDSVNEEVLK 64

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119
           I++ +  E V+ + G+V           I+  +       I IL++A + LPL V G+  
Sbjct: 65  ISEELTYESVVQVKGVVKEDPRAPRGVEIVPSE-------IRILNLASKPLPLDVSGKVS 117

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R + R LDLRR+ +   +      +  +R  + +  FIE  TP + A++ EG  +
Sbjct: 118 ADLDTRLRERVLDLRRNEMRAIVRIADTTLRVIRDTLRSMGFIEVFTPKIIATATEGGAN 177

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + +F A  Q+PQ YK+LL AS  +R F+I P +R E+  +     EF  +D+
Sbjct: 178 LFPVIYFGREAFLA--QSPQLYKELLAAS-LERVFEIGPAWRAEESDTPYHLAEFISVDI 234

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAIR--- 284
           E +F++ +D++  +E ++  +       +            ++S    RI Y +AI    
Sbjct: 235 EAAFMDYEDVMKILEKLIEQILTTLRKEHEDDLKILKHELPSISIPLPRIKYTEAIEILQ 294

Query: 285 ------RYGTD--KPDLR 294
                 ++G D   P+LR
Sbjct: 295 NEGFNIKFGDDLGTPELR 312



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DLV    E+ASG  R H  +++++A  + G++   VEN F    + F  GMPPH G   
Sbjct: 350 FDLVWRHIELASGSSRIHKKDMLIEALKSRGLN---VEN-FQYFIKWFDYGMPPHAGWGL 405

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G  R++++L G  NV+EV+LFP  + 
Sbjct: 406 GFSRLLLMLTGRSNVKEVTLFPRDKK 431


>gi|325968136|ref|YP_004244328.1| aspartyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323707339|gb|ADY00826.1| aspartyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 433

 Score =  117 bits (294), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 165/348 (47%), Gaps = 41/348 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFE 60
           +TH   DL     G  V L+GWV  +R  G I F+ IRD  G  Q+       PDS  + 
Sbjct: 6   KTHWTKDLTPELDGKEVILTGWVWDIRDLGNIKFILIRDREGFIQLTIKRGVAPDS-VWS 64

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +  S+  E  + + G+V +       + I+   IE+   +I++++ ++ LP+ ++G  E 
Sbjct: 65  MIPSLNREDAIAVKGVVRA-------SKIVKAGIEVFPSEIQVIAKSKALPIDIWGSVET 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R K+R +DL+R          +  + ++R  +   +FIE  TP +  +S EG  + 
Sbjct: 118 DLDTRLKFRSIDLKRPFNLLIFRVESETVRAIRETLYGRDFIEVFTPKIIVTSTEGGAEL 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  + ++ A  Q+PQ YK+ L AS  +R F+IAP +R E   ++    EF  +D+E
Sbjct: 178 FTVQYFERIAYLA--QSPQLYKEELTAS-LERIFEIAPAYRAEKHNTNYHLNEFISVDIE 234

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSN--GNTVSNN----------FLRICYDDAIR---- 284
            +F +  D++  +E+V+  V++  S   GN ++            F +I YD+A+     
Sbjct: 235 EAFADYMDVMEILEDVIVNVYDRVSRLYGNELAKYGIEVKVPKRPFRKITYDEALDILSK 294

Query: 285 -----RYGTDKPDLRNPIIMHNVTEHF--VH--SEFRVF-SKILSVNP 322
                 +G D P     I+   + E F  +H  ++ R F +K L  +P
Sbjct: 295 RGLRINWGEDVPKNGMEILSEEIVEPFFIIHFPTDLRAFYTKPLDSDP 342



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DLV +G EIASG  R H+ E ++ A    G++ E  EN        +  GMPPH G   
Sbjct: 348 FDLVIDGLEIASGSSRIHIKEQLMDALKKKGLNPESFENHL----MIYDYGMPPHAGWGM 403

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+ R++M+LL   N+REV L+P
Sbjct: 404 GLYRLLMVLLKRSNIREVVLYP 425


>gi|88603688|ref|YP_503866.1| aspartyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|97196725|sp|Q2FRU5|SYD_METHJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|88189150|gb|ABD42147.1| aspartyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 430

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 125/243 (51%), Gaps = 15/243 (6%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLVMSRS 81
           GW H +R  GG+ FL IRD  GI QV         EIA+++R+   E V+ + G V    
Sbjct: 19  GWAHEIRDLGGLAFLLIRDRTGIIQVTVPKKKVAPEIAETIRAISRESVVRVTGTVKPEG 78

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLDLRRDTLH 139
                     G  EL    IEI+S++   PLP+    + P  +  R   RFLD RR  + 
Sbjct: 79  KAP-------GGRELIPDAIEIVSLSA-TPLPLDVAEKVPAELDTRLDNRFLDARRPRVS 130

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
                R  + ++ R       FIE +T  + A++ EG  +    +   + +F  L Q+PQ
Sbjct: 131 AIFKIRNAVQHATRNFFFENGFIEINTSKIVAAATEGGTELFPIAYFEKEAF--LNQSPQ 188

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            YKQ++MA+GF++ ++I P FR E+  + +   E   +D+E+SF +   ++ T+E+++R 
Sbjct: 189 LYKQMMMAAGFEKVYEIGPIFRAEEHNTTKHLNEATSIDIEVSFTDHLGVMQTLEDLIRD 248

Query: 260 VFE 262
           +++
Sbjct: 249 IYQ 251



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 6/96 (6%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND    KAF  D++    E++SG  R H  +++++  +  G++ E     F      F+ 
Sbjct: 337 NDPEICKAF--DMMHPRMELSSGAQRVHQHDLLVEQIAKKGLNPE----NFEFYLNPFRF 390

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           GMPPH G   G +R+V  +LG  NVRE  LFP  ++
Sbjct: 391 GMPPHAGWGLGAERLVTTMLGLPNVREAVLFPRDRH 426


>gi|307596403|ref|YP_003902720.1| aspartyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307551604|gb|ADN51669.1| aspartyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 433

 Score =  117 bits (292), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 140/294 (47%), Gaps = 25/294 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEI 61
           +TH   D+     G  V L+GWV  +R  G I F+ +RD  GI Q+      A    + +
Sbjct: 6   KTHWTKDVTPELDGKEVILTGWVWDIRDLGNIKFILLRDREGIIQLTVKKGVAPEGVWSL 65

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +S+  E  + + G+V +       + I    +E+   +I +++ ++ LP+ ++G  E  
Sbjct: 66  TQSLGREDAIAVKGVVKA-------SKIARAGVEVFPSEIHVVAKSKALPIDIWGSVETD 118

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              R KYR +DL+R          + +  ++R  +    FIE  TP +  +S EG  +  
Sbjct: 119 LDTRLKYRSIDLKRPINSLIFRVESEVTRAIRETLYGRGFIEVFTPKIIVTSTEGGAELF 178

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + ++ A  Q+PQ YK+ L AS  +R F+IAP +R E   ++    EF  +D+E 
Sbjct: 179 TVQYFERAAYLA--QSPQLYKEELTAS-LERVFEIAPAYRAEKHNTNYHLNEFISVDIEE 235

Query: 242 SFVEQDDILNTMENVLRGVFEE----FSNG--------NTVSNNFLRICYDDAI 283
           +F    D+++ +E+V+  V+E     FSN               F RI YD+A+
Sbjct: 236 AFANYMDVMDVLEDVIISVYERVNKVFSNELAKYGIEIKIPKKPFRRITYDEAL 289



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DLV  G EIASG  R H+ E +++A    G++ E  E+        +  GMPPH G   
Sbjct: 348 FDLVIGGLEIASGSSRIHIKEQLIEALRKRGLNPENFESHL----MVYDYGMPPHAGWGM 403

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+ R++M+LL   N+REV L+P
Sbjct: 404 GLYRLLMVLLKRDNIREVVLYP 425


>gi|256066157|ref|XP_002570486.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|227299150|emb|CAY18004.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 450

 Score =  117 bits (292), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 160/376 (42%), Gaps = 60/376 (15%)

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---NTVSNNFLRICYDDAIRRYGTDKPD 292
           +LD+EM+F+   DI   +EN+L  ++    +      +S  FLR+ Y DA+ RYG+DKPD
Sbjct: 119 KLDIEMAFITPYDIYEIIENMLLYIWPTVQSTLGCQPISTPFLRMEYCDAMSRYGSDKPD 178

Query: 293 LRNPIIMH----------NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +R   +            N+   +V    R F+  + + P ++   I +K         D
Sbjct: 179 VRFGFLFSYSAVDGHTGFNIPRKYVSVFLRFFTFEVLIKPIFQ--NIKSKQ-------LD 229

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            +N      G      +F+                     NTE I + +  Q    C + 
Sbjct: 230 LLNVLKPECGD----LVFFTKG------------------NTE-IELTIAFQTDCPCLWF 266

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNE--EEKKIDFAHNPFT 460
               +    F+   +     E G      F F WI  FP +E N   + K +   H+PFT
Sbjct: 267 QAK-ITILLFSVHIKGLSIYEPG------FHFLWINQFPLFEKNNLGQWKSV---HHPFT 316

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
                       D   +    +DLVCNG E+  G IR H  EV    F+ + + +   E 
Sbjct: 317 AASPETAHFLYTDPSKVIGLHHDLVCNGQEVGGGSIRVHNPEVQKYIFTEI-LKENSCEM 375

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
            +     A   G PPHGGIA G+DR++ + + AK++R+V  FP +    DLL G+P+ V 
Sbjct: 376 EY--FLTALNSGAPPHGGIALGLDRLIAIFVNAKSIRDVIAFPKAPGGKDLLCGTPTMVD 433

Query: 581 VEQLRELGLRIVENPK 596
            E L +  + +  + K
Sbjct: 434 DEILSQYCISVSNHNK 449



 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 5/83 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y++H+CG++    + S V + GW+   R      F+ +RD  GI Q+  + +S   +I +
Sbjct: 41  YKSHACGEVNTQYINSTVTVCGWLEHCRLSSR--FVVLRDDRGIIQIYCDKNS--LQIPQ 96

Query: 64  SVRSEWVLCIDGLVMSRSAETIN 86
              SE VL + G V +R  + +N
Sbjct: 97  -FNSESVLRVTGKVQARPEKDVN 118


>gi|118431776|ref|NP_148450.2| aspartyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|6919973|sp|Q9Y9U7|SYD_AERPE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116063098|dbj|BAA81203.2| aspartyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 442

 Score =  117 bits (292), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 129/252 (51%), Gaps = 17/252 (6%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWV 70
           S VG  VR+ GW +R+R  G + F+ +RD  G+ Q       +P+ A    A+ ++ E V
Sbjct: 16  SLVGGRVRVCGWAYRIRDLGRLKFILVRDRSGVIQATVKRGESPEDA-LRAAEDLKLESV 74

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYR 129
           +C++G +  R A T         +E+  +++E+LS   E LPL V G  +     R KYR
Sbjct: 75  VCVEGEL--RQAPTREG------VEVKVERLEVLSTPVEPLPLEVEGSEKASLPTRLKYR 126

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           +LD+R   +         +    R    ++ F+E  TP + A+  E   +       ++ 
Sbjct: 127 WLDIRNPMVSAIFELEAMVAKVFRDYYWSQGFVEIFTPKIVAAGTESGAEVFPVVYFDKT 186

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
           +F  L Q+PQ YKQ  + +G +R F+I P FR E   + R   E++ LD+E+ F+E  +D
Sbjct: 187 AF--LAQSPQFYKQFAVIAGLERVFEIGPVFRAEPHHTSRHLNEYHSLDIEVGFIESYND 244

Query: 249 ILNTMENVLRGV 260
           ++N +E  +R +
Sbjct: 245 VMNYVEGFMRAI 256



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            + +DL+  G EI +GG R H    +L+   + G+  E     F      F+ G PPHGG
Sbjct: 354 TYSFDLLYRGLEIVTGGQREHRYHRLLENLRDKGLDAE----SFQFYLDFFKHGAPPHGG 409

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
              G++RIVM  L  +N+RE  + P
Sbjct: 410 AGMGLERIVMQTLKLENIREARMLP 434


>gi|195551041|ref|XP_002076152.1| GD12030 [Drosophila simulans]
 gi|194201801|gb|EDX15377.1| GD12030 [Drosophila simulans]
          Length = 299

 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 113/211 (53%), Gaps = 10/211 (4%)

Query: 390 RLDMQDGDSCFFIAGDPLKFCSFAA----DARNHIAQELGIINCNCFEFCWIMDFPFYEW 445
           + D+++ D  F   G  ++  +       D ++ + +       N F F W++DFP +E 
Sbjct: 81  KFDLEENDLLFLGIGSKVETRALLGRIRLDYQDFLVENAKTKKPNDFRFLWVIDFPLFER 140

Query: 446 NEEEKKIDFAHNPFTMPQGG-MESLKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           N E  +++  H+PFT+P    +E+   +  +L SI++  YDLV NG E+  G IR H  +
Sbjct: 141 NRETNQLESVHHPFTLPHSDDLENFATSCENLESIRSQAYDLVLNGQEVGGGSIRIHDRD 200

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             +Q F    I K +  +    L  A + G PPHGGIA G+DR++ +L  A+++R+V  F
Sbjct: 201 --MQHFILEQILK-IPHDHLSHLLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAF 257

Query: 563 PMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           P S N  D L  +P  +S E++R   L +VE
Sbjct: 258 PKSLNGRDPLSNAPVLISDEEMRLYHLSVVE 288


>gi|257053788|ref|YP_003131621.1| aspartyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256692551|gb|ACV12888.1| aspartyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 434

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 137/289 (47%), Gaps = 27/289 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVL 71
           +D G+   ++GWVH +R  GGI FL +RD  G  QV    D    A  E A  V  E VL
Sbjct: 10  ADPGTSATVAGWVHEIRDLGGIAFLILRDTTGKIQVKIEKDELDEALVETALDVHRESVL 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130
            ++G V             TG +E++   IE+++ A+ ELPL   G+ +     R   R 
Sbjct: 70  RVEGDVEEEE------RAPTG-VEVTPDDIEVIAPADPELPLDPSGKVDAELPTRLDNRT 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LDLR+  +      R  ++ S+R      +  E +TP + A+  EG  +    +   + +
Sbjct: 123 LDLRKPEVKAIFEIRAEVLRSVREAFRNLDATEINTPKIVATGTEGGTELFPITYFGREA 182

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  + Q+PQ +KQL++ SG +R F+I P FR E+  + R   E   +D E +F +  + +
Sbjct: 183 F--MNQSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFESAFYDHTEAM 240

Query: 251 NTMENVLRGVFEEFSNG--------------NTVSNNFLRICYDDAIRR 285
           +  E V++  +E  +                +    +F R+ Y++AI R
Sbjct: 241 DACETVVKAAYEGVAGNCADELETLGLTEVFSAPEGDFPRLTYEEAIER 289



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D++    E+ SGG R H  + +++ F   G+        F    + F+ GMPPH G   
Sbjct: 349 FDMMHPSMELVSGGQREHRHDHLVEGFEQQGLDP----GAFEYYTKMFKYGMPPHAGWGL 404

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R+VM +LG +N+RE  +FP
Sbjct: 405 GGERLVMTMLGLENIREAVIFP 426


>gi|292654841|ref|YP_003534738.1| aspartyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291371103|gb|ADE03330.1| aspartyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 434

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 149/334 (44%), Gaps = 43/334 (12%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59
           R RT++      ++ G  V ++GWVH VR  GGI FL +RD  G  QV    D       
Sbjct: 2   RNRTYTAD----AEPGDTVTVAGWVHEVRDLGGIAFLILRDTSGKIQVKFEKDEMDDDLV 57

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGER 118
           E    V  E V+ + G V             TG +E++ + +++++ AE +LPL   G+ 
Sbjct: 58  ETGLGVHRESVISVTGEVDE------EPRAPTG-VEVTPESLDVIAEAEAQLPLDPSGKV 110

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +   S R   R LDLR+D +      R  +  ++R +       E +TP + A+  EG  
Sbjct: 111 DAELSTRLDNRTLDLRKDEVKAIFEIRAEVQRAVRDKFRDLRATEINTPKIVATGTEGGT 170

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +    +   Q +F  + Q+PQ +KQL++ SG +R F++ P FR E+  + R   E   +D
Sbjct: 171 ELFPITYFGQEAF--MNQSPQLFKQLMVGSGLERVFEVGPIFRAEEHNTPRHLNEATSID 228

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNG--------------NTVSNNFLRICYDDAIR 284
            E +F++  + ++  E V+   +E                      S  F R+ Y++AI 
Sbjct: 229 FESAFIDHTEAMDVCEAVVTAAYEAVEENCQDELEALGLEEEFEAPSGEFPRLTYEEAIE 288

Query: 285 R------------YGTDKPDLRNPIIMHNVTEHF 306
           R            +G D P      +  +V EH+
Sbjct: 289 RINATGELDEQLVWGDDLPTEGEKALGEDVGEHY 322



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 4/95 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +K +D     +  +D++    E+ SGG R H  + ++  F   G+  +  E       + 
Sbjct: 336 IKDHDDDETLSTGFDMMHPNMELVSGGQREHRFDHLVAGFEQQGLDPDAFEY----YTKM 391

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           F+ GMPPH G   G +R++M +LG +N+RE  LFP
Sbjct: 392 FKYGMPPHAGFGLGGERLIMTMLGLENIREAVLFP 426


>gi|242241686|ref|ZP_04796131.1| conserved hypothetical protein [Staphylococcus epidermidis W23144]
 gi|242234862|gb|EES37173.1| conserved hypothetical protein [Staphylococcus epidermidis W23144]
          Length = 75

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/69 (69%), Positives = 60/69 (86%)

Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
           F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CF
Sbjct: 6   FLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCF 65

Query: 221 RDEDPRSDR 229
           RDED R+DR
Sbjct: 66  RDEDLRADR 74


>gi|26350423|dbj|BAC38851.1| unnamed protein product [Mus musculus]
          Length = 236

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 107/208 (51%), Gaps = 9/208 (4%)

Query: 391 LDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL---GII--NCNCFEFCWIMDFPFYEW 445
           +++Q+ D     AG+  K CS     R   A  L   G +  +   F F W++DFP +  
Sbjct: 12  MEIQEEDIVLLTAGEHEKACSLLGKLRLECADLLEMRGAVLRDPAVFSFLWVVDFPLFLA 71

Query: 446 NEEE-KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
            EE   +++ AH+PFT P      L   +   ++   YDLV NG EI  G +R H  +  
Sbjct: 72  KEESPTELESAHHPFTAPNSSDIHLLYTEPEKVRGQHYDLVLNGNEIGGGSVRIH--DAQ 129

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           LQ +    + KE V      L +A   G PPHGGIA G+DR+V L+ GA ++R+V  FP 
Sbjct: 130 LQRYILETLLKEDV-KLLSHLLQALDYGAPPHGGIALGLDRLVCLVTGAPSIRDVIAFPK 188

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           S    DL+  +P +VS E+L+   + ++
Sbjct: 189 SYRGQDLMSNAPDSVSPEELKPYHIHVL 216


>gi|167044328|gb|ABZ09006.1| putative tRNA synthetases class II (D, K and N) [uncultured marine
           crenarchaeote HF4000_APKG6C9]
          Length = 436

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 138/297 (46%), Gaps = 27/297 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFE 60
           R+H   +L  S   S V + GW+  VR HG I FL I D  G  Q+VA     PD     
Sbjct: 11  RSHYSKELDPSLAESDVTIMGWISSVRSHGNITFLTIVDKMGEVQIVAKKGSCPDDLIKN 70

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGERE 119
           ++K      V  I  +  S  A           +E+  + + I S  E++ P   + +  
Sbjct: 71  LSKLKEHSSVGLIGTVKTSEKA--------PNGVEIIPKDLRIFSSVEKIPPFDPYAKTI 122

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R + R +DLRR  L      R+ ++ S+R     +NF E +TP + A++ EG   
Sbjct: 123 KNIDTRLEIRAIDLRRSVLQNVFNARSNVLRSIRQYFYDQNFTEINTPKMIATATEGGAA 182

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  N+ +F A  Q+PQ YK+ L  S F++ F+IAP FR E  R++R   E   +D 
Sbjct: 183 LFPIFYYNKEAFLA--QSPQLYKEQLTMS-FEKVFEIAPIFRAEPSRTNRHLSEAISIDF 239

Query: 240 EMSFVEQDDILNTMENVLRGV---FEEFSNGN--------TVSNNFLRICYDDAIRR 285
           E ++V+ +D++  +E +++      +EFS  N         +S+   +  Y D +++
Sbjct: 240 EEAYVDYNDVMKRIEQIIKQAILSIQEFSKDNHDADFTIPEISDTIPQYSYSDLLKK 296



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI+SG  R      +     N G+  +     F      F  G+PPH G   
Sbjct: 351 FDLMYGDLEISSGSTRIEKKSELEDRMKNKGMKIDT----FSYHLNVFDYGVPPHAGCGI 406

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++M L G +N+R+ + +P
Sbjct: 407 GLERLMMALTGIENIRDTTFYP 428


>gi|126180091|ref|YP_001048056.1| aspartyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|166225360|sp|A3CXH4|SYD_METMJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|125862885|gb|ABN58074.1| aspartyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 429

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 133/277 (48%), Gaps = 25/277 (9%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCIDGLVMS 79
           + GWVH VR  GG+ F  IRD  GI QV         EI   A+SV  E V+ + G V +
Sbjct: 17  IVGWVHEVRDLGGLSFFLIRDRTGIIQVTIPKKKVPAEILDTARSVSRESVVRVRGTVKA 76

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                       G  E+  +++EI+S AE  LPL V  +       R   RFLD R+  +
Sbjct: 77  -------IEKAPGGREIVPEELEIISTAESPLPLDVAEKVSAEMDTRLDSRFLDARKPRV 129

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                 R+ +  +    + +   I  +TP + A++ EG  +    +   + +F  + Q+P
Sbjct: 130 RAIFFIRSAVTCAATAFLASRGCINIATPKIVAAATEGGTELFPIAYFEKEAF--MNQSP 187

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           Q YKQ++MA+GF+  F+I P FR E+  + R   E   LD+E+SF + +D++  +E+++ 
Sbjct: 188 QLYKQMMMAAGFEAVFEIGPIFRAEEHNTVRHLNEATSLDVEVSFADHNDVMELLEDLIV 247

Query: 259 GVFEEFSNG------------NTVSNNFLRICYDDAI 283
            V++  +                 S  F RI Y +AI
Sbjct: 248 HVYDHVAKDCSEHLAELEIDLKVPSKPFPRIPYAEAI 284



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E++SG  R H  +++++  S  G+S E     F    + F+ GMPPH G   
Sbjct: 344 FDLMHPRMELSSGAQRIHDHDLLVERISAKGLSPE----SFEFYLKPFRYGMPPHAGWGL 399

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           GI+R+VM +L   N+RE  LFP  ++
Sbjct: 400 GIERLVMTMLDLPNIREAVLFPRDRH 425


>gi|55730753|emb|CAH92097.1| hypothetical protein [Pongo abelii]
          Length = 120

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 57/117 (48%), Positives = 77/117 (65%), Gaps = 7/117 (5%)

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMR---CRMIAENFIECSTPILTASSPEGARD 179
           ++R +YR+LDLR   +  N+  R++++  MR   C +    F+   TP L   +P GA++
Sbjct: 1   ALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNL--HGFVGIETPTLFKRTPGGAKE 58

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q
Sbjct: 59  FLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQ 113


>gi|302348258|ref|YP_003815896.1| Aspartyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328670|gb|ADL18865.1| Aspartyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 464

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 141/280 (50%), Gaps = 19/280 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVR 66
           D   S +G  +R+ GWV  +R  GG+ F+ +RD  G+ QVV      P++A  E +K + 
Sbjct: 34  DRANSLLGQKIRVCGWVDNIRDLGGVRFVLLRDRSGVLQVVIKKGVTPETAI-ETSKELV 92

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIR 125
            E V C +G ++   ++         + EL A  I++LS   E +PL      E   ++R
Sbjct: 93  KETVACFEGTLVESKSKL--------KYELQASGIQVLSKPVEPIPLEPATSTEAQLNVR 144

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             YR+LD+R   +       + + N  R       F+E  TP + A+  EG  +      
Sbjct: 145 LDYRWLDVRNLKVSAIFQFESWVANKFREFFRQNGFVEVFTPKIVAAGTEGGAEVFPVIY 204

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             + ++ A  Q+PQ YKQ+ + +G +R F++ P FR E   + +   EF+ LD+EM F+E
Sbjct: 205 FGREAYLA--QSPQFYKQMAVIAGLERVFEVGPVFRAEAHHTVKHLTEFHGLDIEMGFIE 262

Query: 246 -QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
             +D++N +E+  R + +E    +++    +R  +D A+R
Sbjct: 263 GPEDVMNMLESFFRYLAKEAEIDDSIET--VRNYFDLALR 300



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EIA+G  R H  + +L    + G++ E    RF      F+ G PPHGG   
Sbjct: 379 FDLLFRGLEIATGSQREHRYDQLLANLRDKGLNPE----RFQFYLNFFKYGAPPHGGAGL 434

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV   L   NVRE  L P
Sbjct: 435 GLERIVKQFLNLDNVREARLLP 456


>gi|15897124|ref|NP_341729.1| aspartyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284174365|ref|ZP_06388334.1| aspartyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|62287584|sp|Q980V3|SYD_SULSO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|13813305|gb|AAK40519.1| Aspartyl-tRNA synthetase (aspS) [Sulfolobus solfataricus P2]
 gi|261601786|gb|ACX91389.1| aspartyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 429

 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 150/295 (50%), Gaps = 22/295 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           +RTH   +L     GS V+++GWVH VR  GG IF+ +RD  GI Q+V    +  ++   
Sbjct: 2   FRTHLVSELNPKLDGSEVKVAGWVHNVRNLGGKIFILLRDKSGIGQIVVEKGNNAYDKVI 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122
           ++  E  + ++G+V +  A   N       +E+ A+ IEILS A   LPL V G+ +   
Sbjct: 62  NIGLESTIVVNGVVKA-DARAPNG------VEVHAKDIEILSYARSPLPLDVTGKVKADI 114

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R + R LDLRR  +   +  ++  + S R  +    F+E  TP + AS+ EG      
Sbjct: 115 DTRLRERLLDLRRLEMQAVLKIQSVAVKSFRETLYKHGFVEVFTPKIIASATEGGAQLFP 174

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                + +F A  Q+PQ YK+LL A   +R F+IAP +R E+  +     EF  +D+EM+
Sbjct: 175 VLYFGKEAFLA--QSPQLYKELL-AGAIERVFEIAPAWRAEESDTPYHLSEFISMDVEMA 231

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           F + +DI+  +E ++  +           N+  R C ++ ++      P++R PI
Sbjct: 232 FADYNDIMALIEQIIYNMI----------NDVKREC-ENELKILNYTPPNVRIPI 275



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI SG  RNH+ EV+  +    G++ E     F    + F  GMPPH G   
Sbjct: 344 FDLIFRWLEIVSGSSRNHVKEVLENSLKVRGLNPE----SFEFFLKWFDYGMPPHAGFGM 399

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+ R++++L G ++V+EV  FP
Sbjct: 400 GLARVMLMLTGLQSVKEVVPFP 421


>gi|307354031|ref|YP_003895082.1| aspartyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157264|gb|ADN36644.1| aspartyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 429

 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 124/246 (50%), Gaps = 15/246 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
            ++ GWVH +R  GG+ F  +RD  G  Q   V      A    A+ V  E V+ + G+V
Sbjct: 15  AKVIGWVHEIRDLGGLSFYILRDRTGFLQATIVKKKAPEAVLNAARDVSRESVVMVSGIV 74

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPE-SIRFKYRFLDLRR 135
                         G  EL  ++ EI+S AE  PLP+   E+   E   R   R+LD RR
Sbjct: 75  KPTEK-------APGGRELIPEEFEIISRAE-TPLPLDVSEKVLAEVDTRIDNRYLDARR 126

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             ++     R+ +  ++   M +E FI  +T  + A++ EG  +    +  ++ +F  L 
Sbjct: 127 PKINSIFSIRSNVTRALYEFMFSEGFINITTSKIVAAATEGGTELFPIAYFDKEAF--LN 184

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ YKQ++MA+GFD+ F+I P FR E+  + R   E   +D+E+SF + + ++  +E 
Sbjct: 185 QSPQLYKQMMMAAGFDKVFEIGPIFRAEEHNTTRHLNEATSIDVEVSFADHNGVMELLEK 244

Query: 256 VLRGVF 261
           V+   +
Sbjct: 245 VIIAAY 250



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E++SG  R H  +++++     G+S     + F    + F+ GMPPH G   
Sbjct: 344 FDLMHPKMELSSGAQRIHQHDLLVEQIREKGLSP----DSFEFYLKPFRYGMPPHAGWGL 399

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G++R++M +L   N+RE  LFP  ++
Sbjct: 400 GMERLIMTMLDLPNIREAVLFPRDRH 425


>gi|289580752|ref|YP_003479218.1| aspartyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530305|gb|ADD04656.1| aspartyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 434

 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 138/289 (47%), Gaps = 27/289 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVL 71
           ++ G    ++GWVH +R  GGI FL +RD  G  QV    D    E+  +   V  E V+
Sbjct: 10  AEPGDDATVAGWVHEIRDLGGIAFLILRDATGKIQVKFEKDEMDDELVDTGLGVSRESVV 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130
            + G V             TG +E++ + ++++S A+ ELPL   G+ +   S R   R 
Sbjct: 70  SVTGTVEE------EPRAPTG-VEVTPESVDVISAADPELPLDPSGKVDADLSTRLDNRT 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LDLR+D +      R  I+ ++R +       E +TP + A+  EG  +    +   + +
Sbjct: 123 LDLRKDEVQAVFEIRAEILRAVREQFREFYCTEINTPKIVATGTEGGTELFPITYFGEEA 182

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  + Q+PQ +KQL+  S  +R F+I P FR E+  + R   E   +D E +F +Q+D +
Sbjct: 183 F--MNQSPQLFKQLIAGSNVERVFEIGPIFRAEEHNTPRHLNEATSIDFEGAFCDQNDAM 240

Query: 251 NTMENVLRGVFEEFSNGNTV--------------SNNFLRICYDDAIRR 285
           +  E +++  +E  +   +                 +F R+ Y++AI R
Sbjct: 241 DVAEGIVKAAYEAVTENCSEELEALGLEEEFEVPEGDFPRLSYEEAIER 289



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E+ SGG R H  E +++ F   G+      ++F    + F+ GMPPH G   
Sbjct: 349 FDLMHPRMELVSGGQREHRHEHLIEGFEQQGLDP----DQFEYYTKMFKYGMPPHAGFGL 404

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++M +LG  N+RE  LFP
Sbjct: 405 GGERLIMTILGLDNIREAVLFP 426


>gi|300711961|ref|YP_003737775.1| aspartyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299125644|gb|ADJ15983.1| aspartyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 432

 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 138/288 (47%), Gaps = 26/288 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVL 71
           ++ G    ++GWVH VR  GGI FL +RD  G  Q+    D    EI ++   +  E V+
Sbjct: 10  AEPGETATVAGWVHEVRDLGGIAFLILRDKSGKIQIKFEKDEMDDEIVETGLDLARESVI 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130
            + G V             TG +E++ +++++++ AE ELPL   G+ +   S R   R 
Sbjct: 70  SVTGAVEE------EPRAPTG-VEITPEELDVIASAEPELPLDPSGKVDAELSTRLDNRT 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LDLR++        R  ++ ++R         E +TP + A+  EG  +    +   Q +
Sbjct: 123 LDLRKEETKAIFEIRAEVLRAVRESFREIGCTEINTPKIVATGTEGGTELFPITYFGQEA 182

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  + Q+PQ +KQL++ SG +R F+I P FR E+  + R   E   +D E +F++ ++ +
Sbjct: 183 F--MNQSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATMIDFESAFIDHEEAM 240

Query: 251 NTMENVLRGVFE-------------EFSNGNTVSNNFLRICYDDAIRR 285
           +  E  L   +E              + +    +  F R+ Y++AI R
Sbjct: 241 DACERTLLAAYEGVAENCEAQLETLGYDDFEVPAEGFPRLTYEEAIER 288



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E+ SGG R H  + +++ F   G+       +F    + F+ GMPPH G A 
Sbjct: 347 FDLMHPRMELVSGGQREHRYDHLVEGFEQQGLDP----AQFEYYTKMFKYGMPPHAGWAY 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM +L   N+RE  LFP
Sbjct: 403 GVERLVMTMLDLGNIREAVLFP 424


>gi|55378426|ref|YP_136276.1| aspartyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|62287529|sp|Q5V1N2|SYD_HALMA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|55231151|gb|AAV46570.1| aspartyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 434

 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 125/249 (50%), Gaps = 13/249 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCID 74
           G  V ++GWVH +R  GGI FL +RD  G  QV    D       E   +V+ E V+ + 
Sbjct: 13  GDTVTVAGWVHEIRDLGGIAFLILRDTTGKIQVKFEKDEMDDDLVETGLNVQRESVISVT 72

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDL 133
           G V             TG +E++ + ++++S A+ ELPL   G+ +     R   R LDL
Sbjct: 73  GAVEEE------PRAPTG-VEVTPESVDVISEADPELPLDPSGKVDAELPTRLDNRTLDL 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R+D +      R  ++ S+R      N  E +TP + A+  EG  +    +   Q +F  
Sbjct: 126 RKDEVKAIFEIRAEVLRSVREAFRELNCTEINTPKIVATGTEGGTELFPITYFGQEAF-- 183

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           + Q+PQ +KQL++ SG +R F+I P FR E+  + R   E   +D E +F +  + ++  
Sbjct: 184 MNQSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFESAFYDHTEAMDAC 243

Query: 254 ENVLRGVFE 262
           E+V++  +E
Sbjct: 244 EHVVQSAYE 252



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D++    E+ SGG R H  + +++ F   G+  E  E       + F+ GMPPH G   
Sbjct: 349 FDMMHPSMELVSGGQREHRFDHLVEGFEQQGLDPEAFEY----YTKMFKYGMPPHAGWGL 404

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++M +LG +N+RE  LFP
Sbjct: 405 GGERLIMTMLGLENIREAVLFP 426


>gi|229579863|ref|YP_002838262.1| aspartyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228010578|gb|ACP46340.1| aspartyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
          Length = 429

 Score =  113 bits (283), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 152/295 (51%), Gaps = 22/295 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           +RTH   +L     G+ V+++GWVH +R  GG +F+ +RD  GI Q+V    ++ ++   
Sbjct: 2   FRTHLVSELNPKLDGAEVKVAGWVHNIRNLGGKVFILLRDKSGIGQIVVEKGNSAYDKIM 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122
           ++  E  L ++G+V    A+    N     IE+ A+ +EILS A+  LPL V G+ +   
Sbjct: 62  NIGLESTLVVNGIV---KADPRAPN----GIEVHAKDVEILSYAKSPLPLDVTGKVKADI 114

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R + R LDLRR  +   +  ++  + S R  +    F+E  TP + AS+ EG      
Sbjct: 115 DTRLRERLLDLRRLEMQAVLKIQSVAVKSFRETLYKYGFVEVFTPKIIASATEGGAQLFP 174

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                + +F A  Q+PQ YK+LL A   +R F+IAP +R E+  +     EF  +D+EM+
Sbjct: 175 VLYFGKEAFLA--QSPQLYKELL-AGAIERVFEIAPAWRAEESDTPYHLSEFISMDVEMA 231

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           F + +DI+  +E ++  +           N+  R C ++ ++      PD++ P+
Sbjct: 232 FADYNDIMALIEQIIYNMI----------NDVRREC-ENELKNLNYTPPDVKIPM 275



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI SG  RNH+ EV+  +    G++ E     F    + F  GMPPH G   
Sbjct: 344 FDLIFRWLEIVSGSSRNHVKEVLENSLKVRGLNPE----SFEFFLKWFDYGMPPHAGFGM 399

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+ R++++L G ++V+EV  FP
Sbjct: 400 GLARVMLMLTGLQSVKEVVPFP 421


>gi|145592543|ref|YP_001154545.1| aspartyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145284311|gb|ABP51893.1| aspartyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 428

 Score =  113 bits (283), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 150/304 (49%), Gaps = 35/304 (11%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDS 56
           M+  +TH   ++     GS V ++GWV  +R  G I F+ +RD  G  Q+       PD 
Sbjct: 1   MYPKKTHWTSEVTPELHGSNVVVAGWVWELRDLGKIKFIVVRDREGFVQITLKAGKTPDH 60

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F+I   +  E V+ + G+V S       + I    +E+  ++I +L+ A+ LPL ++ 
Sbjct: 61  -LFKIFSELGKEDVVVVKGIVES-------SKIAKSGVEIFPEEIWVLNKAKPLPLDIWS 112

Query: 117 EREYPE-SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
           E   P+ + R K+R +DL+R          + I+ ++R  M  E F+E  TP +  +S E
Sbjct: 113 ET--PDLATRLKWRSVDLKRPRNLAVFSTASAILRAIRDVMYEEGFVEVFTPKIIVTSTE 170

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           G  + L P    +   Y L Q+PQ YK+ L AS  +R F+I P +R E   +D    EF 
Sbjct: 171 GGAE-LFPVMYFERVAY-LSQSPQLYKEQLTAS-LERVFEIGPAYRAEKHNTDYHLNEFI 227

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--------------LRICYDD 281
            +D E +F++ +DI++ +E +++ V    S   TV++                 R+ YD+
Sbjct: 228 SVDAEAAFMDYNDIMDILEKLVKRV---ISTITTVAHRLEEAGLKPLLEISKIPRVDYDE 284

Query: 282 AIRR 285
           A+ R
Sbjct: 285 AVER 288



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K+  YDL+ NG E+ASG  R H  + + +     G+   + E+        F  GMPPH 
Sbjct: 339 KSESYDLIINGIEVASGATRVHRRDELEEEMKRRGLDPRLFESHLA----VFDYGMPPHA 394

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G +R+V  LLG  NVR  +L+P
Sbjct: 395 GFGLGFNRLVAALLGLDNVRHATLYP 420


>gi|307138529|ref|ZP_07497885.1| aspartyl-tRNA synthetase [Escherichia coli H736]
          Length = 202

 Score =  113 bits (283), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 107/199 (53%), Gaps = 3/199 (1%)

Query: 396 GDSCFFIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
           GD  FF   D  K  + A  A R  + ++LG+ + + +   W++DFP +E ++ E  +  
Sbjct: 1   GDMIFF-GADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFE-DDGEGGLTA 58

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
            H+PFT P+    +       +  A  YD+V NG+E+  G +R H  ++    F  +GI+
Sbjct: 59  MHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGIN 118

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
           +E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+  
Sbjct: 119 EEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTE 178

Query: 575 SPSTVSVEQLRELGLRIVE 593
           +PS  +   L EL +++V+
Sbjct: 179 APSFANPTALAELSIQVVK 197


>gi|311264845|ref|XP_003130365.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Sus
           scrofa]
          Length = 408

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 9/207 (4%)

Query: 391 LDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL---GII--NCNCFEFCWIMDFP-FYE 444
           L +Q+ D     AG+  K CS     R   A  L   G++  +   F F W++DFP F+ 
Sbjct: 185 LGIQEEDVVLVTAGEHKKACSLLGKLRLECADLLEARGVVLRDPALFSFLWVVDFPLFFP 244

Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
             E  ++++ AH+PFT P      L   +   +++  YDLV NG E+  G IR H +E  
Sbjct: 245 KEEHPQELESAHHPFTAPHPSDIHLLYTEPQKVRSQHYDLVLNGNEVGGGSIRIHNAE-- 302

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           LQ +    + KE V+     L +A   G PPHGGIA G+DR++ L+ GA ++R+V  FP 
Sbjct: 303 LQRYVLAAVLKEDVK-LLSHLLQALDYGAPPHGGIALGLDRLMCLVTGAPSIRDVIAFPK 361

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLRI 591
           S    DL+  +P ++  E L+   +++
Sbjct: 362 SFRGHDLMSNAPDSIPPEDLKPYHIQV 388



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++CG+L  S +G  V L GW+   R +   IFL +RD +G+ QVV   D     +   
Sbjct: 104 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---IFLVLRDFHGLVQVVIPQDEEVLPVFLK 160

Query: 65  VRSEW 69
               W
Sbjct: 161 ANRNW 165


>gi|329765180|ref|ZP_08256761.1| aspartyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138339|gb|EGG42594.1| aspartyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 436

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 138/297 (46%), Gaps = 27/297 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFE 60
           R+H   +L  S  GS V + GWV  VR HG I F+ +RD  G   +VA     PD    E
Sbjct: 11  RSHYSNELNSSMDGSEVTVMGWVLTVRGHGNISFVTLRDKNGDIPIVAKKGDCPDE-LRE 69

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP-LPVFGERE 119
              ++++   + + G V S         II          + + S  E++P      +  
Sbjct: 70  KLSALKAHSSIAVVGKVKSSEKAPTGFEII-------PTDLRVFSDVEKIPPFEPLAKTV 122

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R + R +DLRR TL      R+ ++ S+R     E F E +TP + A++ EG   
Sbjct: 123 KNIDTRLEVRPIDLRRKTLQHIFNVRSEVLKSIRDYFYEEEFTEINTPKMIATATEGGAA 182

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  N+ +F A  Q+PQ YK+ L  S F++ F+I P FR E  R++R   E   +D+
Sbjct: 183 LFAIFYYNKEAFLA--QSPQLYKEQLTMS-FEKVFEIGPIFRAEPSRTNRHLAEAISIDL 239

Query: 240 EMSFVEQDDILNTMENVLR---GVFEEFSNGN--------TVSNNFLRICYDDAIRR 285
           E +FV+ +D++N +EN+++       +++  N         +  +  R  YDD + +
Sbjct: 240 EEAFVDYNDVMNRIENIIKISLNSVNDYAKNNPDAEFIIPQIPKSIPRYSYDDLVEK 296



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E++SG  R      + +   N G+  +  E   G    AF  G+PPH G   
Sbjct: 351 FDLMFGDLELSSGSTRIEKRHELEERMKNKGMKTDAFEYHLG----AFDYGVPPHAGCGI 406

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++M L G +N+R+V+ +P
Sbjct: 407 GLERLIMALTGTENIRDVTFYP 428


>gi|15789697|ref|NP_279521.1| aspartyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169235411|ref|YP_001688611.1| aspartate--tRNA ligase [Halobacterium salinarum R1]
 gi|3122880|sp|O07683|SYD_HALSA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2209068|dbj|BAA20527.1| aspartyl-tRNA synthetase [Halobacterium salinarum]
 gi|10580067|gb|AAG19001.1| aspartyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167726477|emb|CAP13262.1| aspartate--tRNA ligase [Halobacterium salinarum R1]
          Length = 436

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 128/252 (50%), Gaps = 13/252 (5%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIAKSVRSE 68
           D+   D G    ++G VH +R  GGI+F+ +RD  G  QVVA  D     FE A+ + SE
Sbjct: 9   DVTPDDDGEDTTIAGHVHELRDLGGILFVIVRDATGRLQVVAKEDDTPDLFETAEGLSSE 68

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP-LPVFGEREYPESIRFK 127
            V+ + G + +       ++   G +EL+  ++ ++S A ++P + +  + +   S R  
Sbjct: 69  DVVQVTGTLEA-------SDQAPGGVELAPTELTVVSEATDVPSIEISKDVDADLSTRLD 121

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R LD+R+ +       R++ + +M        F E  TP L+ +  EG  D       +
Sbjct: 122 ERHLDVRKPSTKAVFSLRSKAMGAMTDWFYDNRFEEVDTPELSTAGAEGGADLFPVVYYD 181

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-Q 246
           + ++  L Q+PQ YKQ+L+ASG DR F++   FR ED  + R   E    D+E+ +VE  
Sbjct: 182 KEAY--LSQSPQLYKQILVASGVDRLFEVGHAFRAEDFGTSRHVSEIAMFDVELGYVEDH 239

Query: 247 DDILNTMENVLR 258
            D+++  E  LR
Sbjct: 240 HDVMDVQEESLR 251



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
           + + G+D+ S K   +DL+  G E++SGG R H  E +       G+  E     F    
Sbjct: 339 QDVDGDDVASRK---FDLLYRGQELSSGGQREHDIERLTAKMREQGVEPE----NFEFYL 391

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            AF+ G+PPHGG   GIDR++  L G  N++E  LFP
Sbjct: 392 DAFRYGVPPHGGYGLGIDRLIQQLAGLDNIKEAILFP 428


>gi|229581477|ref|YP_002839876.1| aspartyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012193|gb|ACP47954.1| aspartyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 429

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 152/295 (51%), Gaps = 22/295 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           +RTH   +L     G+ V+++GWVH +R  GG +F+ +RD  GI Q+V    ++ ++   
Sbjct: 2   FRTHLVSELNPKLDGAEVKVAGWVHNIRNLGGKVFILLRDKSGIGQIVVEKGNSAYDKIM 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122
           ++  E  L ++G+V    A+    N     IE+ A+ +EILS A+  LPL V G+ +   
Sbjct: 62  NIGLESTLVVNGIV---KADPRAPN----GIEVHAKDVEILSYAKSPLPLDVTGKVKADI 114

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R + R LDLRR  +   +  ++  + S R  +    F+E  TP + AS+ EG      
Sbjct: 115 DTRLRERLLDLRRLEMQAVLKIQSVAVKSFRETLYKYGFVEVFTPKIIASATEGGAQLFP 174

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                + +F A  Q+PQ YK+LL A   +R F+IAP +R E+  +     EF  +D+EM+
Sbjct: 175 VLYFGKEAFLA--QSPQLYKELL-AGAIERVFEIAPAWRAEESDTPYHLSEFISMDVEMA 231

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           F + +DI+  +E ++  +           N+  R C ++ ++      PD++ P+
Sbjct: 232 FADYNDIMALIEQIIYNMI----------NDVRREC-ENELKILNYTPPDVKIPM 275



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI SG  RNH+ EV+  +    G++ E     F    + F  GMPPH G   
Sbjct: 344 FDLIFRWLEIVSGSSRNHVKEVLENSLKVRGLNPE----SFEFFLKWFDYGMPPHAGFGM 399

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+ R++++L G ++V+EV  FP
Sbjct: 400 GLARVMLMLTGLQSVKEVVPFP 421


>gi|124026937|ref|YP_001012257.1| aspartyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|123977631|gb|ABM79912.1| Aspartyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 442

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 134/249 (53%), Gaps = 16/249 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVLCID 74
           +G+   ++GWV  VR HGG++F+ +RD  G  Q+V   N     +E A+ +  E V+   
Sbjct: 20  IGNEYTVAGWVDTVRVHGGLVFVVVRDRTGKMQLVVKRNISREAWEHARKLAPESVVAAR 79

Query: 75  G-LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           G LV S++A         G  EL   ++E+L+ A+ LP+ ++   +   + R  +RFLDL
Sbjct: 80  GRLVESKAA--------LGGRELQVYELEVLNKADPLPIDIYAPDKTTLAKRLDWRFLDL 131

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           R +  ++ I++    +         EN FIE  TP +  ++ EG  +       ++ +F 
Sbjct: 132 R-NPRNQLIMRIAAEVARAAREWFVENGFIEIFTPKIVGAATEGGAEVFSIVYFDKPAFL 190

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILN 251
           A  Q+PQ YKQ+ + +G ++ F+I P FR E   + R   E+  +D+EM F++  +D+++
Sbjct: 191 A--QSPQLYKQMGVIAGLEKVFEIGPAFRAEPHHTTRHLTEYTSIDLEMGFIDSYEDVMD 248

Query: 252 TMENVLRGV 260
            +E V+R V
Sbjct: 249 IVEAVIRHV 257



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            + +DL+  G EIA+GG R H  +V+++     G++       F      F+ G PPHGG
Sbjct: 354 TYSFDLLMRGLEIATGGQREHRYDVLVKQLEEKGLNP----RNFEWYLAMFRYGAPPHGG 409

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
              G++R+VM LLG  N+RE  + P
Sbjct: 410 AGIGLERVVMQLLGLGNIREARMLP 434


>gi|227828226|ref|YP_002830006.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|227830984|ref|YP_002832764.1| aspartyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229585454|ref|YP_002843956.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238620417|ref|YP_002915243.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|284998473|ref|YP_003420241.1| aspartyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|227457432|gb|ACP36119.1| aspartyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|227460022|gb|ACP38708.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228020504|gb|ACP55911.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238381487|gb|ACR42575.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|284446369|gb|ADB87871.1| aspartyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|323475293|gb|ADX85899.1| aspartyl-tRNA synthetase [Sulfolobus islandicus REY15A]
 gi|323478018|gb|ADX83256.1| aspartyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 429

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 152/295 (51%), Gaps = 22/295 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           +RTH   +L     G+ V+++GWVH +R  GG +F+ +RD  GI Q+V    ++ ++   
Sbjct: 2   FRTHLVSELNPKLDGAEVKVAGWVHNIRNLGGKVFILLRDKSGIGQIVVEKGNSAYDKIM 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPE 122
           ++  E  L ++G+V    A+    N     IE+ A+ +EILS A+  LPL V G+ +   
Sbjct: 62  NIGLESTLVVNGIV---KADPRAPN----GIEVHAKDVEILSYAKSPLPLDVTGKVKADI 114

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R + R LDLRR  +   +  ++  + S R  +    F+E  TP + AS+ EG      
Sbjct: 115 DTRLRERLLDLRRLEMQAVLKIQSVAVKSFRETLYKYGFVEVFTPKIIASATEGGAQLFP 174

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                + +F A  Q+PQ YK+LL A   +R F+IAP +R E+  +     EF  +D+EM+
Sbjct: 175 VLYFGKEAFLA--QSPQLYKELL-AGAIERVFEIAPAWRAEESDTPYHLSEFISMDVEMA 231

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           F + +DI+  +E ++  +           N+  R C ++ ++      PD++ P+
Sbjct: 232 FADYNDIMALIEQIIYNMI----------NDVRREC-ENELKILNYTPPDVKIPM 275



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EI SG  RNH+ EV+  +    G++ E     F    + F  GMPPH G   
Sbjct: 344 FDLIFRWLEIVSGSSRNHVKEVLENSLKVRGLNPE----SFEFFLKWFDYGMPPHAGFGM 399

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+ R++++L G ++V+EV  FP
Sbjct: 400 GLARVMLMLTGLQSVKEVVPFP 421


>gi|266623561|ref|ZP_06116496.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288864661|gb|EFC96959.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 157

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 88/142 (61%), Gaps = 4/142 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           R+H C ++  S+VG  V + GWV + R  GGIIF+D+RD  GI Q++   ++  +  F  
Sbjct: 10  RSHRCTEVTSSNVGETVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEESDCGAESFAK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ + G V  R A  +N N+ TG IE+ A+ + ILS +E  P P+    +  
Sbjct: 70  AEKLRSEFVIAVTGHVEKR-AGGVNENLATGDIEVRAESLRILSESETPPFPIEENSKTK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIV 143
           E +R KYR+LDLRR  + +NI+
Sbjct: 129 EELRLKYRYLDLRRPDIQRNIM 150


>gi|323210668|gb|EFZ95546.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
          Length = 190

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 97/177 (54%), Gaps = 1/177 (0%)

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  + ++L + + + +   W++DFP +E ++ E  +   H+PFT P+    S        
Sbjct: 10  RLKLGKDLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEE 68

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH
Sbjct: 69  AVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPH 128

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+A G+DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+
Sbjct: 129 AGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVK 185


>gi|290559859|gb|EFD93182.1| tRNA synthetase class II (D K and N) [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 427

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 131/252 (51%), Gaps = 13/252 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCIDGLVM 78
           +++ GW   VR  GG+ F+ +RD  G  QV  +  S    FE+   +++E V+ ++G   
Sbjct: 9   IKVIGWAENVRNLGGLAFITVRDINGKYQVTVSKKSNEKLFEMIPEIKAESVIEVNG--- 65

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDT 137
                  NA  I G  E+    +E+++VAE+ +PL +  + E        +RFL LR+  
Sbjct: 66  ---TRKDNAKAING-YEIIPDSLELITVAEQPVPLNLSDKVESSLDKDLDFRFLSLRKPK 121

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           +      ++ +  ++       NF +  +  + + + EG  +       ++ +F  L Q+
Sbjct: 122 VAATFRVQSTVSGAITKFFEENNFYQIHSSKIISQATEGGANVFQVLYFDKTAF--LAQS 179

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENV 256
           PQ YKQ++MA+GF+R F+I P FR E   + R   E+  +DMEMSF+   ++I++ ME +
Sbjct: 180 PQFYKQMMMAAGFERVFEIGPVFRAEPHHTSRHLTEYTSVDMEMSFINSYEEIMSVMEQL 239

Query: 257 LRGVFEEFSNGN 268
           +  +++E  + N
Sbjct: 240 MLAIYKEVKSKN 251



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%)

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL+  G EI +   R H   V++      G+  E    +F      F+ G+PPHGG   G
Sbjct: 343 DLIYKGLEITTLAQREHRYSVLVSQLEEKGLDPE----KFKFYTDFFRYGVPPHGGSGTG 398

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           ++RIV  +L  +NV E +L P
Sbjct: 399 LERIVKQMLNLENVAEATLLP 419


>gi|119872193|ref|YP_930200.1| aspartyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119673601|gb|ABL87857.1| aspartyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 429

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 142/303 (46%), Gaps = 28/303 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSA 57
           M+  +TH   D+     G  V L+GWV  +R  G + F+ +RD  G  Q+   V      
Sbjct: 1   MYPKKTHWTSDITTDLHGREVTLAGWVWELRDLGKVKFIVLRDREGFVQLTLKVGKTPEH 60

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F +   +  E V+ + G+V +       + I    +E+    I IL+ A+ LPL ++ E
Sbjct: 61  VFRVFSELNREDVIVVKGVVET-------SKIAKRGVEVFPTDITILNKAKPLPLDIWSE 113

Query: 118 REYPE-SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
              P+ + R K+R +DL+R          ++I+  +R  +  E F+E  TP +  +S EG
Sbjct: 114 T--PDLATRLKWRSIDLKRPRNLAVFSLASKILREIRETLYGERFVEVFTPKIIVTSTEG 171

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             + L P    +   Y L Q+PQ YK+ L AS  +R F+I P FR E   +D    EF  
Sbjct: 172 GAE-LFPVLYFERVAY-LSQSPQLYKEQLTAS-LERVFEIGPAFRAEKHNTDYHLNEFIS 228

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNG------------NTVSNNFLRICYDDAIR 284
           +D E +F+   D+++ +E +++ V    S               T  +   R+ YD+AI 
Sbjct: 229 VDAEAAFMNYHDVMDILEKIMKRVVLVLSENVARLREVGLMPVVTELDKIPRVEYDEAIE 288

Query: 285 RYG 287
           + G
Sbjct: 289 KLG 291



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
           K ND    ++  YDL+ NG E+ASG  R H  + + +     G+  ++ E+        F
Sbjct: 336 KEND----RSESYDLIINGIEVASGATRIHKRDELEEEMRKRGLDPKLFESHLA----VF 387

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             GMPPH G   G +R++  LLG  NVR  +L+P
Sbjct: 388 DYGMPPHAGFGLGFNRLLTALLGLDNVRHATLYP 421


>gi|331642480|ref|ZP_08343615.1| aspartyl-tRNA synthetase (Aspartate--tRNA ligase)(AspRS)
           [Escherichia coli H736]
 gi|320186111|gb|EFW60855.1| aspartyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|331039278|gb|EGI11498.1| aspartyl-tRNA synthetase (Aspartate--tRNA ligase)(AspRS)
           [Escherichia coli H736]
          Length = 200

 Score =  112 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 2/194 (1%)

Query: 401 FIAGDPLKFCSFAADA-RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF 459
           F   D  K  + A  A R  + ++LG+ + + +   W++DFP +E ++ E  +   H+PF
Sbjct: 3   FFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPF 61

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
           T P+    +       +  A  YD+V NG+E+  G +R H  ++    F  +GI++E   
Sbjct: 62  TSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQR 121

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
            +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+  +PS  
Sbjct: 122 EKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFA 181

Query: 580 SVEQLRELGLRIVE 593
           +   L EL +++V+
Sbjct: 182 NPTALAELSIQVVK 195


>gi|118575444|ref|YP_875187.1| aspartyl/asparaginyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118193965|gb|ABK76883.1| aspartyl/asparaginyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 522

 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 133/259 (51%), Gaps = 16/259 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH    LG S  G  V + GWV  VR HG I F+ IRD  G  QVVA   S   E  + 
Sbjct: 99  RTHYSSGLGPSMDGKDVTVMGWVMAVRGHGAISFMTIRDRDGRIQVVAKSGSCPDETRER 158

Query: 65  V---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +   +   V+ + G V  R++E   +       EL   ++++ +  +++P P   + +  
Sbjct: 159 ISGLKPHSVVAVTGTV--RASEKAPSG-----FELVPNELKVFADVQKIP-PFEPQAKTV 210

Query: 122 ESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           ++I  R + R +DLRRD L +    R+ ++   R       F+E STP + +++ EG   
Sbjct: 211 KNIETRLEIRPIDLRRDALLELFHARSAVLRETREYFYENGFVEASTPKMISTATEGGAA 270

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  N+ +F A  Q+PQ YK+ L  S  +R F+I P FR E  R++R   E   +D+
Sbjct: 271 LFPIFYYNKEAFLA--QSPQLYKEQLTMS-LERVFEIGPIFRAEPSRTNRHLAEAISIDL 327

Query: 240 EMSFVEQDDILNTMENVLR 258
           E +FV+ +DI++ + ++++
Sbjct: 328 EEAFVDYNDIMDRISDIVK 346



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 12/87 (13%)

Query: 481 QYDLVCNGFEIASGGIR----NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
            +DL+    EI+SG  R      + E M     N G         FG    AF  G+PPH
Sbjct: 436 SFDLMFGDLEISSGSTRIDNRAELEERMAAKGMNAG--------SFGHHLAAFDYGVPPH 487

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   G++R++M L G +N+R+V+ +P
Sbjct: 488 AGCGIGLERLMMALTGTENIRDVTFYP 514


>gi|219850950|ref|YP_002465382.1| aspartyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219545209|gb|ACL15659.1| aspartyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 424

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 126/250 (50%), Gaps = 15/250 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCIDGLVM 78
           ++ GWVH VR  GG+ F  IRD  GI QV      A  E+    K V  E V+ + G V 
Sbjct: 10  KIIGWVHEVRDLGGLAFFLIRDRTGIIQVTIPKKKASEEVLAAIKGVSRESVVQVTGQVK 69

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLDLRRD 136
           +            G  EL     ++LS ++  PLP+    + P  +  R   RFLD RR 
Sbjct: 70  AMEK-------APGGRELLPSSFDVLSRSDS-PLPLDVVEKVPADLDTRLDVRFLDARRP 121

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +      R+ ++++++  +    F + +TP + A++ EG  +    +   + +F  L Q
Sbjct: 122 RVAAVFEIRSAVLHAVQQFLHKREFTQITTPKIVAAATEGGTELFPIAYFEKEAF--LNQ 179

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ YKQ++MA+GF++ ++I P FR E+  + +   E   +D+E+SF +  D++  +E +
Sbjct: 180 SPQLYKQMMMAAGFEKVYEIGPIFRAEEHNTTKHLNEATSIDVEVSFADHYDMMTLLEEM 239

Query: 257 LRGVFEEFSN 266
           +   +E  S 
Sbjct: 240 IITTYEHISQ 249



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E++SG  R H  ++++      G+S E     F    R F+ GMPPH G   
Sbjct: 339 FDLMHPRMELSSGAQRVHQYDLLVSQIIAKGLSPE----SFEFYLRPFRYGMPPHAGFGV 394

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+VM +LG +N+RE  LFP  ++
Sbjct: 395 GAERLVMTMLGLQNIREAVLFPRDRH 420


>gi|222480075|ref|YP_002566312.1| aspartyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222452977|gb|ACM57242.1| aspartyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 434

 Score =  110 bits (276), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 136/279 (48%), Gaps = 25/279 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V ++G VH +R  GG++FL +RD  G+ Q+V     +   FE  +   +E V+ + G   
Sbjct: 17  VAIAGHVHEIRDLGGLVFLIVRDREGLIQIVFKEEREPELFEAVQDAGAEDVVRVVG--- 73

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDT 137
               + + ++   G +E++  + E++  A+  LPL +  + E   S R   R LDLR+  
Sbjct: 74  ----KPLESDQAPGGVEIAPTEYEVIDEADSPLPLEISKDIEVDLSTRLDNRALDLRKPE 129

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R++++ +M      E F++  TP+++    EG  +       NQ +F  L Q+
Sbjct: 130 TLAVFTLRSKLMTAMEEWFDDEGFVDIKTPLISKGGAEGGAELFPILYYNQDAF--LSQS 187

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENV 256
           PQ YKQ+LMASG++  ++    FR ED  + R   E    D+E++++ +  D+++  E  
Sbjct: 188 PQLYKQMLMASGYEAVYETGTAFRAEDFATSRHVSEIAMFDVELAYIDDHHDVMDVQEKS 247

Query: 257 LRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           LR      +              +   ++F RI +D+A+
Sbjct: 248 LRHALRAVAENAERELDLLDVDLDVPEDDFPRITFDEAL 286



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 7/102 (6%)

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
           M+ ++G+D+ S K   +DL+  G E++SGG R H ++ M++     G+        F   
Sbjct: 336 MQDVEGDDIASRK---FDLIYKGQELSSGGQREHDADRMVEVMEEEGVET----ANFEFY 388

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             A   G PPHGG   GIDR+V  +    N++E  +FP   N
Sbjct: 389 IEALSFGTPPHGGYGLGIDRLVQKVADLDNIKEAIMFPRDPN 430


>gi|161528574|ref|YP_001582400.1| aspartyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339875|gb|ABX12962.1| aspartyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 428

 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 140/292 (47%), Gaps = 25/292 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           +TH   +L    +G  V L GW+  +R  G + F+ +RD  GI+QV+        +    
Sbjct: 5   KTHDISELTSELIGKQVVLGGWIEDLRKLGKMSFITLRDVSGISQVIVK--GELNDNLGE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123
           +  + V+ + G+V    A            E+ A++IE+L  A   LP+   G  E    
Sbjct: 63  INRQSVVSVKGIVQETKARDF-------AFEIKAEEIEVLGKAIHPLPVDPIGRVESNID 115

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LD+R          R  ++ S+R  ++ + FIE +TP +  S+ EG  +    
Sbjct: 116 TRLNHRALDMRNQKTASIFKLRHYVLQSLRKTLVGKKFIEITTPKIIGSASEGGANLFSL 175

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++ A  Q+PQ YK+  M  G +R F+I+  +R E+  + R   EF  +D+E +F
Sbjct: 176 EYFGKKAYLA--QSPQLYKEQ-MTIGLERVFEISNFYRAENSHTGRHLSEFTSIDIEAAF 232

Query: 244 VEQDDILNTMENVLRGVFEEFSN---------GNTV---SNNFLRICYDDAI 283
           ++ +D+++ +E+++  V++  S          G+T+    + F RI Y+  I
Sbjct: 233 MDYNDVMDVLESLVMDVYKFTSENCKKEQEIIGHTIEVPKSPFERITYNQCI 284



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL     E++SGG R H  E +     N    +++   +F    +AF  GMPPH G   
Sbjct: 343 FDLQYGYLELSSGGTRLHNPERL----KNRLREQDLDPAQFTDHLKAFDWGMPPHSGWGM 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+DR++  L+G  NVREV L+P
Sbjct: 399 GLDRLMTTLIGIDNVREVVLYP 420


>gi|159041320|ref|YP_001540572.1| aspartyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157920155|gb|ABW01582.1| aspartyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 430

 Score =  110 bits (275), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 142/291 (48%), Gaps = 22/291 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           +TH   ++     G  V LSGWV  +R  G I F+ +RD  G+ QV     S   E   +
Sbjct: 6   KTHWTSEIKPELDGKEVTLSGWVWEIRDVGRIKFIMLRDREGMVQVTVKRSSVSDETWDT 65

Query: 65  V---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REY 120
           V     E V+ + G+V +       + +    +E+   ++ +L+ A  LP+ ++G   E 
Sbjct: 66  VSRLSKEDVVSVRGIVRA-------SKVAKTGVEVEPIEVRLLNKANPLPIDIWGNVDET 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
              +R +YR +DL+R +        + ++ +MR  +    FIE  TP + A+S EG  + 
Sbjct: 119 MLDLRLRYRTVDLKRRSNVILFKALSEVVKAMRTTLYGYGFIEVFTPKIIATSTEGGAE- 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           L P +  + + Y L Q+PQ YK+ L AS  +R F+I P +R E   +     EF  +D E
Sbjct: 178 LFPVQYFERTAY-LAQSPQLYKEELTAS-LERVFEIGPAYRAEKHDTTYHVNEFISVDAE 235

Query: 241 MSFVEQDDILNTMENVL----RGVFEEFSN-GNTV---SNNFLRICYDDAI 283
            +F+   D+++ +E+V+    R   +  S  G  V   S  F  I YDDA+
Sbjct: 236 AAFMNYRDVMSVLEDVIVESYRASVDLLSQIGREVRVPSKPFKVITYDDAL 286



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 13/105 (12%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +T P  G ES         ++  +DLV +G E+ SG  R H  + + +A    G++    
Sbjct: 331 YTKPIEGDES---------RSESFDLVIDGMEVTSGSTRIHDKDELEKAMRARGLNP--- 378

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              F      +  GMPPH G   G+ R++M++ G +N+REV LFP
Sbjct: 379 -GNFSTHLEIYSWGMPPHAGWGLGLYRLMMVMAGVRNIREVILFP 422


>gi|18312116|ref|NP_558783.1| aspartyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|62287581|sp|Q8ZYM8|SYD_PYRAE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|18159548|gb|AAL62965.1| aspartyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 428

 Score =  110 bits (275), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 154/304 (50%), Gaps = 35/304 (11%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDS 56
           M+  +TH   ++  +  G+ V ++GWV  +R  G + F+ +RD  G  QV       PD 
Sbjct: 1   MYPKKTHWTAEITPNLHGTEVVVAGWVWELRDIGRVKFVVVRDREGFVQVTLKAGKTPDH 60

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F++   +  E V+ I G+V +       + I    +E+   +I IL+ A+ LP+ ++ 
Sbjct: 61  -LFKVFAELSREDVVVIKGIVEA-------SKIAKSGVEIFPSEIWILNKAKPLPIDIWS 112

Query: 117 EREYPE-SIRFKYRFLDLRRDTLHKNIVKRT---RIINSMRCRMIAENFIECSTPILTAS 172
           E   P+ + R K+R +DL+R    +N+V  T    ++ S+R  +  E F+E  TP +  +
Sbjct: 113 ET--PDLATRLKWRSVDLKRP---RNLVVFTVASAMLRSIREVLYGEGFVEVFTPKIIVT 167

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           S EG  + L P    +   Y L Q+PQ YK+ L AS  +R F+I P +R E   +D    
Sbjct: 168 STEGGAE-LFPVMYFERVAY-LSQSPQLYKEQLTAS-LERVFEIGPAYRAEKHNTDYHLN 224

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGV----------FEEFSNGNTVS-NNFLRICYDD 281
           EF  +D E +F++ +DI++ +E ++R +           EE      +  +N  R+ YD+
Sbjct: 225 EFISVDAEAAFMDYNDIMDILEKIMRRLASTVSEYAPKLEEVGIKALMELSNIPRVDYDE 284

Query: 282 AIRR 285
           A+ R
Sbjct: 285 AVDR 288



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K+  YDL+ NG E+ASG  R H  + + +     G+   + E+        F  GMPPH 
Sbjct: 339 KSESYDLIINGIEVASGATRIHKRDELEEEMKKRGLDPRLFESHLS----VFDYGMPPHA 394

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G +R+V  LLG  NVR  +L+P
Sbjct: 395 GFGLGFNRLVTALLGLDNVRHATLYP 420


>gi|6094394|sp|O24822|SYD_HALVO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3298338|dbj|BAA31457.1| aspartyl tRNA synthetase [Haloferax volcanii]
          Length = 433

 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 129/264 (48%), Gaps = 17/264 (6%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59
           R RT++      ++ G  V ++GWVH VR  GGI FL +RD  G  QV    D       
Sbjct: 2   RNRTYTAD----AEPGDTVTVAGWVHEVRDLGGIAFLILRDTSGKIQVKFEKDEMDDDLV 57

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGER 118
           E    V  E V+ + G V             TG +E++ + +++++ AE +LPL   G+ 
Sbjct: 58  ETGLGVHRESVISVTGEVDE------EPRAPTG-VEVTPESLDVIAEAEAQLPLDPSGKV 110

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +   S R   R LDLR+D +      R  +  ++R +       E +TP + A+  EG  
Sbjct: 111 DAELSTRLDNRTLDLRKDEVKAIFEIRAEVQRAVRDKFRDLRATEINTPKIVATGTEGGT 170

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +    +   Q +F  + Q+PQ +KQL++ SG +R F++ P FR E+  + R   E   +D
Sbjct: 171 ELFPITYFGQEAF--MNQSPQLFKQLMVGSGLERVFEVGPIFRAEEHNTPRHLNEATSID 228

Query: 239 MEMSFVEQDDILNTMENVLRGVFE 262
            E +F++  + ++  E V+   +E
Sbjct: 229 FESAFIDHTEAMDVCEAVVTAAYE 252



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 4/95 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +K +D     +  +D++    E+ SGG R H  + ++  F   G+  +  E       + 
Sbjct: 335 IKDHDDDETLSTGFDMMHPNMELVSGGQREHRFDHLVAGFEQQGLDPDAFEY----YTKM 390

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           F+ GMPPH G   G +R++M +LG +N+RE  LFP
Sbjct: 391 FKYGMPPHAGFGLGGERLIMTMLGLENIREAVLFP 425


>gi|284165949|ref|YP_003404228.1| aspartyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284015604|gb|ADB61555.1| aspartyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 434

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 27/289 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVL 71
           ++ G  V ++GWVH +R  GGI FL +RD  G  Q+    D       E       E V+
Sbjct: 10  TEPGDDVTVAGWVHEIRDLGGIAFLILRDTSGKIQIKFEKDEMDDDLVETGLDASRESVV 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130
            + G V             TG +E++ + +E+++ A+ ELPL   G+ +   S R   R 
Sbjct: 70  KVSGAVEEEP------RAPTG-VEVTPESVEVVAPADPELPLDPSGKVDADLSTRLDNRT 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LDLR++ +      R+ ++N++R +    +  E +TP + A+  EG  +    +   + +
Sbjct: 123 LDLRKEDVQSVFEIRSGVLNAVRDQFREFDCTEINTPKIVATGTEGGTELFPITYFGEEA 182

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  + Q+PQ +KQL+  S  +R F+I P FR E+  + R   E   +D E +F +  D +
Sbjct: 183 F--MNQSPQLFKQLIAGSNVERVFEIGPIFRAEEHNTPRHLNEATSIDFEGAFCDHQDAM 240

Query: 251 NTMENVLRGVFEEFSN--GNTV------------SNNFLRICYDDAIRR 285
           +  E +++  +E      G+ +              +F RI Y+ AI R
Sbjct: 241 DVAEGIVKAAYEAVQENFGDELEAIGIADEFAVPEGDFPRISYEGAIER 289



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E+ SGG R H  E +++ F   G+      ++F    + F+ GMPPH G   
Sbjct: 349 FDLMHPRMELVSGGQREHRHEKLIEGFEQQGLDP----DQFEYYTKMFKYGMPPHAGFGL 404

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++M LLG  N+RE  LFP
Sbjct: 405 GGERLIMTLLGLDNIREAVLFP 426


>gi|110667239|ref|YP_657050.1| aspartyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|121692429|sp|Q18KP5|SYD_HALWD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|109624986|emb|CAJ51399.1| aspartate--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 434

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 134/286 (46%), Gaps = 27/286 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVLCID 74
           G  + ++GWVH +R  GGI FL +RD  G  Q+    D    EI ++   V  E V+ I 
Sbjct: 13  GDEITVAGWVHEIRDLGGIAFLILRDRSGKIQIKFEKDEMNDEIVQTGLDVPRESVISIT 72

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDL 133
           G+         +       +E+    IE+LS A+ ELPL   G+     S R   R LDL
Sbjct: 73  GVADDEPRAPTD-------VEIVPTAIEVLSSADTELPLDPSGKVNADLSTRLDNRTLDL 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R+  +      R+ ++ + R         E +TP + A+  EG  +    +   + +F  
Sbjct: 126 RKKEVKAVFQIRSEVLRAARDAFRELGCTEINTPKIVATGTEGGTELFPITYFGEEAF-- 183

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           + Q+PQ +KQL++ SG +R F+I P FR E+  + R   E   +D E +F+   + ++  
Sbjct: 184 MNQSPQLFKQLMIGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFESAFINHAEAMDAC 243

Query: 254 ENVLRGVFEEFS-------------NGNTVSN-NFLRICYDDAIRR 285
           E V+   ++  +             +G +V + +F RI Y +AI R
Sbjct: 244 EYVVTAAYQGVAENCITELETLGLRDGFSVPDESFPRISYQEAIER 289



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 4/95 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +K +D     +  +D++    E+ SGG R H  E ++  F   G+  E    +F    + 
Sbjct: 336 IKDHDDDKTLSTGFDMMHPQMELVSGGQREHRYEHLVSGFEQQGLDPE----QFDYYTKM 391

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           F+ GMPPH G   G +R+VM +LG +N+RE  LFP
Sbjct: 392 FRYGMPPHAGWGLGGERLVMTMLGLENIREAVLFP 426


>gi|407668|gb|AAD12351.1| unknown [Mycoplasma genitalium]
          Length = 177

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 97/170 (57%), Gaps = 6/170 (3%)

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLL 475
           RN +   L I+  N + FCW++DFP Y+++E+  +    HN F+ P Q  +++ + N   
Sbjct: 5   RNELKYHLDIVKPNQYSFCWVVDFPLYDFDEKTNQWISNHNIFSKPKQEWIDNFESNKNE 64

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           ++   Q+DLV NGFEI SG IR +   V  +  +++ I      N+F  L  A+Q G P 
Sbjct: 65  ALSE-QFDLVLNGFEIGSGSIRINDPIVQKRLMNSLNIDP----NKFAFLLEAYQYGAPV 119

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
           HGG+  GIDR++M+L    N+REV  FP + +  ++   +P  +  E+++
Sbjct: 120 HGGMGLGIDRLMMILNQTDNIREVIAFPKNNHGIEVHTNAPDKIDKEEVK 169


>gi|76801236|ref|YP_326244.1| aspartyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|97196739|sp|Q3IT59|SYD_NATPD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|76557101|emb|CAI48675.1| aspartate--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 433

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 133/289 (46%), Gaps = 27/289 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVL 71
           ++ G  V ++GWVH VR  GGI FL +RD  G  QV    D    E+ ++   V  E V+
Sbjct: 10  AEPGETVTVAGWVHEVRDLGGIAFLILRDTTGQIQVKFEKDEMDDELVETGLNVARESVI 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130
            + G V             TG +E++ + +E+LS A+ ELPL   G+ +   S R   R 
Sbjct: 70  TVSGDVEEEP------RAPTG-VEVTPETVEVLSEADTELPLDPTGKVDAELSTRLDNRT 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LDLR +        R  ++ ++R      N  E +T  + A+  EG  +    +   + +
Sbjct: 123 LDLRSEEGQAIFEIRAEVLRAVREAFRDANATEINTSKIVATGTEGGTELFPITYFGEEA 182

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  + Q+PQ +KQL+  S  +R F+I P FR E+  + R   E   +D E +F +  D +
Sbjct: 183 F--MNQSPQLFKQLVAGSNIERVFEIGPIFRAEEHNTPRHLNEATSIDFEGAFCDHTDAM 240

Query: 251 NTMENVLRGVFEEFSNGNT--------------VSNNFLRICYDDAIRR 285
           +  E V+   +E  +   T                  F R+ Y++AI R
Sbjct: 241 DVCEQVVTAAYEAVAENCTDQLEALGITEEFEVPETPFPRLSYEEAIER 289



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D++    E+ SGG R H  E ++  F   G+  E  E       + F+ GMPPH G   
Sbjct: 348 FDMMHPRMELVSGGQREHRREELIAGFEQQGLEPEAFEY----YTKMFKYGMPPHAGWGL 403

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++M +L   N+RE  LFP
Sbjct: 404 GGERLLMTMLDLDNIREAVLFP 425


>gi|329765408|ref|ZP_08256988.1| aspartyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138314|gb|EGG42570.1| aspartyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 428

 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 141/292 (48%), Gaps = 25/292 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           +TH   +L    +G  V L GWV  +R  G + F+ +RD  GI+Q++        +  + 
Sbjct: 5   KTHDISELNSGIIGKEVVLGGWVEDLRKLGKMTFITLRDVSGISQIIVK--GELNDNLEE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123
           +  + V+ + G+V    A   +        E+ A++I++L+ A   LP+   G  E    
Sbjct: 63  LNRQSVISVRGIVQETKARDFD-------FEIKAEEIDVLAKAIHPLPVDPIGRLESNID 115

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LD+R          R  ++  +R  +  + FIE +TP +  S+ EG  +    
Sbjct: 116 TRLNHRALDMRNQKTASIFKLRHHVLEILRKTLAEKKFIEITTPKIIGSASEGGANLFSL 175

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++ A  Q+PQ YK+  M  G +R ++I+  +R E+  + R   EF  +D+E +F
Sbjct: 176 DYFGKTAYLA--QSPQLYKEQ-MTIGLERVYEISNFYRAENSHTGRHLSEFTSIDIEAAF 232

Query: 244 VEQDDILNTMENVLRGVF---------EEFSNGNTV---SNNFLRICYDDAI 283
           ++ +D++N +E+++  V+         E+ + G+T+    + F RI Y   I
Sbjct: 233 MDYNDVMNILESLVMEVYKFVSVNCKKEQENIGHTIEIPKSPFERITYTQVI 284



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL     E++SGG R H  E +       G+       +F    + F  GMPPH G   
Sbjct: 343 FDLQYGYLELSSGGTRLHNPETLKSRLKEQGLDP----TQFADHLQTFDWGMPPHSGWGM 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+DR++  L+G  NVREV L+P
Sbjct: 399 GLDRLMTTLIGIDNVREVVLYP 420


>gi|269986727|gb|EEZ93007.1| aspartyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 429

 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 136/273 (49%), Gaps = 15/273 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVL 71
           +S+    + L GW   VR  GG+ F+ +RD  G  QV    N +   FE    +++E V+
Sbjct: 4   ISNENGKIELEGWAENVRNLGGLAFITVRDINGRYQVTVSKNSNPEIFEKINEIKAESVI 63

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYR 129
              G       +  NA  + G  E+  +K+EI++ AE+ P+P+    +   S+     +R
Sbjct: 64  KAVG------EKKENAKAVNG-YEIIPEKLEIITTAEQ-PVPLNLSEKVQSSLDKEIDFR 115

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           FL LR+         ++ + N++      + F +  +  + + + EG  +       ++ 
Sbjct: 116 FLSLRKPKTAAIFKIQSTVSNAITKFFEDQGFYQIHSSKIISQATEGGANVFQVLYFDKT 175

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
           +F  L Q+PQ YKQ++MA+GF++ F+I P FR E   + R   E+  +D+EMSF++  +D
Sbjct: 176 AF--LAQSPQFYKQMMMAAGFEKVFEIGPVFRAEPHHTSRHLTEYTSVDLEMSFIKSYED 233

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
           +++ ME ++  +F+E    N        I  DD
Sbjct: 234 VMSVMEKLILRIFKEVRERNKNDLELYGIKLDD 266



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL+  G EI +   R H  +V++       +  E    +F      F+ G+PPHGG   G
Sbjct: 345 DLIYKGLEITTLAQREHRYDVLISQLKEKNLDPE----KFKFYTDFFRYGVPPHGGSGTG 400

Query: 543 IDRIVMLLLGAKNVREVSLFPMS 565
           ++RIV  +L  +NV E +L P +
Sbjct: 401 LERIVKQMLNLENVAEATLLPRT 423


>gi|322369960|ref|ZP_08044522.1| aspartyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320550296|gb|EFW91948.1| aspartyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 432

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 140/319 (43%), Gaps = 35/319 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVL 71
           ++ G  V ++GWVH +R  GGI FL +RD  G  QV    D    E+ ++   V  E V+
Sbjct: 10  AEPGETVTVAGWVHEIRDLGGIAFLIVRDTTGKIQVKFEKDDMDEELVETGLGVNRESVV 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G V        +  I+   + + A+         ELPL   G+ +   S R   R L
Sbjct: 70  EITGDVKEEPRAPTDVEIVPTDVAVIAE------AEPELPLDPSGKVDADLSTRLDNRTL 123

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           D R++ +      R  ++ ++R         E +TP + A+  EG  +    +   + +F
Sbjct: 124 DARKEDVEAVFKIRGEVLRAVRETFRDLGCSEINTPKIVATGTEGGTELFPITYFGEEAF 183

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             + Q+PQ +KQL++ SG +R F+I P FR E+  + R   E   +D E +F + ++ ++
Sbjct: 184 --MNQSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFESAFYDHNEAMD 241

Query: 252 TMENVLRGVFEEFSNG------------NTVSNNFLRICYDDAIRR------------YG 287
             E V++  +E  +                   +F R+ Y++AI R            +G
Sbjct: 242 ACEAVVKAAYEGVAENCQDELDALDIDFEVPEGDFPRLTYEEAIERINATGELDEMLVWG 301

Query: 288 TDKPDLRNPIIMHNVTEHF 306
            D P      +  +V  H+
Sbjct: 302 DDLPTEGEKALGEDVGTHY 320



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D++    E+ SGG R H  + +++ F   G+  E     F    + F+ GMPPH G   
Sbjct: 347 FDMMHPRMELVSGGQREHRYDRLVEGFEQQGLDPEA----FDYYTKMFKYGMPPHAGWGL 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++M +LG  N+RE  LFP
Sbjct: 403 GGERLIMTMLGLDNIREAVLFP 424


>gi|268325663|emb|CBH39251.1| aspartyl-tRNA synthetase [uncultured archaeon]
          Length = 437

 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 135/286 (47%), Gaps = 17/286 (5%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
             ++  ++ G  V ++GWVH  R  GG+ FL +RD  G  Q+         E+   V+  
Sbjct: 16  TNEITAANAGERVSVAGWVHEKRDLGGVFFLIVRDISGFAQITLPKKKVEPELFDRVKR- 74

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFK 127
                   V+    E  +        E+  Q++++LS A + LPL   G+       R  
Sbjct: 75  ---VPRESVVVVEGEVKSEKKAPNGYEIIPQQMDVLSEASQVLPLDTTGKVGAELDTRLD 131

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            RF+DLR +      + R+  + ++R        IE +TP + +++ EG       S   
Sbjct: 132 ARFMDLRTERTKHIFMIRSLALKAIRDFFDERGLIEINTPKIVSAATEGGTALFPISYFE 191

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+PQ YKQ+LMASGFDR ++IAP FR E+  + +   E   +D+E++FV   
Sbjct: 192 REAF--LNQSPQLYKQILMASGFDRVYEIAPIFRAEEHDTTKHLNEATSVDVELAFVSDK 249

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN----------NFLRICYDDAI 283
           +++  +E ++  ++ +  +   ++            F RI Y +AI
Sbjct: 250 EVMALLEELIASIYTKVVDYPGLAKLKVKLEVPAIPFRRITYAEAI 295



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E++SG  R H  E++ +     G+S     + F     AF+ GMPPH G   
Sbjct: 352 FDLMHPRLELSSGSQRVHSYELLKRQIETKGLSA----DSFEFYLDAFRYGMPPHAGWGL 407

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++M +L  +N+R+V LFP
Sbjct: 408 GVERLLMSMLEVENIRDVVLFP 429


>gi|116180536|ref|XP_001220117.1| hypothetical protein CHGG_00896 [Chaetomium globosum CBS 148.51]
 gi|88185193|gb|EAQ92661.1| hypothetical protein CHGG_00896 [Chaetomium globosum CBS 148.51]
          Length = 695

 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 214/521 (41%), Gaps = 64/521 (12%)

Query: 93  QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSM 152
           +I+L    I+ L+V  +  +   G +  P S   + RF     D L   ++ R +I   +
Sbjct: 199 RIDLDLTSIQPLNVFPKDIIVSKGVQFPPSSRHLQIRF----SDALRTRLLVRPQIAFQL 254

Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
           R  +    F E  TP+L  SS                S ++ P A      LL+AS    
Sbjct: 255 RKSLNDLAFTEVETPVLAPSS---------------TSRFSWPAASGDITNLLVASETKI 299

Query: 213 YFQIA--PCFRDEDPRSDRLPGEFY----QLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           Y +I      R +   S  +  + +    QLD+EMSF + +D++ T+E+++  +      
Sbjct: 300 YGRIGNQSSHRHDITASMTVTAKRWANSAQLDLEMSFAKGEDVMRTVESIVSDL------ 353

Query: 267 GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEV 326
              VS N      D     Y   K  L N +      +H +   F      L  NP  E 
Sbjct: 354 --AVSLNSDFSVVDTGEEVYLAPKKSLLNRV------DHILPRSFVSMITHLE-NPVVEA 404

Query: 327 WAI-PAKGGGG---NRAFCDRMNEW---ARSQGQPGLAYIFWRLDESGNVAGMGPVA-KH 378
           +   P   G G     +F D + +    A SQ  P  A +   +D S  + G+ P+  + 
Sbjct: 405 FRFRPNSVGEGQVPTSSFVDGLMKTLPPALSQ-NPDGAPVALIIDSSKPLRGLSPLGFEG 463

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIA--GDPLKFCSFAADA-RNHIAQEL---GIINCN-C 431
              + +  +    D +DGD   F A   +P +  S A    R+ + Q     G++  +  
Sbjct: 464 AGALESSEMPGLADFEDGDVLVFQARKDEPFQGGSTAIGTFRSLVYQTAVSKGLLPRDLS 523

Query: 432 FEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYD 483
           F+F W+ +FP +  + E              H+PFT P    +  L   + L  +   YD
Sbjct: 524 FKFLWVNNFPMFTPDNETDPGQGGHAGFSATHHPFTAPLTNEDVELLATNPLKARGDHYD 583

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG E+  G  R H++++       +    +    +F  L  A + G PPH G A G 
Sbjct: 584 LVVNGVELGGGSRRIHVAKMQEYIMREILKMTDSGVAQFSHLLEALRAGCPPHAGFALGF 643

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           DR+V +L    +VR+V  FP S    DL + SP  ++ EQL
Sbjct: 644 DRLVAVLTYTDSVRDVIAFPKSMKGEDLTVKSPGRITKEQL 684


>gi|167045666|gb|ABZ10314.1| putative tRNA synthetases class II (D, K and N) [uncultured marine
           crenarchaeote HF4000_APKG10L15]
          Length = 431

 Score =  107 bits (267), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 131/292 (44%), Gaps = 25/292 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V L GWV  +R  G + FL +RD  GITQ++   D    +    
Sbjct: 8   RTHYIEDINTDMKGQEVILGGWVEDLRKMGKMTFLTLRDVTGITQIILTDD--VMKSIDD 65

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123
           +  + V+ + G +    A          + E+ A +I +L+ A   LP+   G  E    
Sbjct: 66  ITRQSVVRVTGKIQDTKARDF-------ECEIKADEINVLAKAVHPLPIDPLGRLESHID 118

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R   R LD+R          R  ++ S+R     + F E +TP +  S+ EG  +    
Sbjct: 119 NRLNSRALDMRNQKTASIFKIRHHVLASLRKTFAEKKFTEITTPKIIGSASEGGANLFSL 178

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++ A  Q+PQ YK+  M  G +R F+IA  +R E   + R   EF  +D+E +F
Sbjct: 179 DYFGKQAYLA--QSPQLYKE-QMTIGLERVFEIASFYRAEKSHTGRHLSEFTSVDIEAAF 235

Query: 244 VEQDDILNTMENVLRGVFEEFSN---------GNTVS---NNFLRICYDDAI 283
           ++  D++N +E+++   F+  S          GN ++     F +I Y  A+
Sbjct: 236 MDYTDVMNVLEDLVFNTFKYVSENCKKEQEIIGNKITMPNGPFKKITYSQAL 287



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL     E++SGG R H  E +    S   +       +F    +AF  GMPPH G   
Sbjct: 346 FDLQFGYLELSSGGSRLHNPEKIKMRLSEQNLDPA----KFSEHLQAFDWGMPPHAGWGL 401

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++ ++LG  NVREV L+P
Sbjct: 402 GLERLLTVILGIDNVREVILYP 423


>gi|167043278|gb|ABZ07984.1| putative tRNA synthetases class II (D, K and N) [uncultured marine
           crenarchaeote HF4000_ANIW141M12]
          Length = 431

 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 124/265 (46%), Gaps = 19/265 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V L GW+  +R  G + FL +RD  GITQ++   D     +AKS
Sbjct: 8   RTHYIEDVNADMKGQEVILGGWIEDLRKMGKMTFLTLRDVTGITQIILTDD-----VAKS 62

Query: 65  ---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREY 120
              +  + V+ + G +    A            E+ A +I +LS A   LP+   G  E 
Sbjct: 63  IDGITRQSVVRVTGKIQDTKARDFAC-------EIKADEINVLSKAVHPLPIDPLGRLES 115

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   R LD+R          R  ++ S+R   + + F E +TP +  S+ EG  + 
Sbjct: 116 HIDNRLNSRALDMRNQKTASIFKIRHHVLASLRKIFLEKKFTEITTPKIIGSASEGGANL 175

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  + ++ A  Q+PQ YK+  M  G +R F+IA  +R E   + R   EF  +D+E
Sbjct: 176 FSLDYFGKQAYLA--QSPQLYKE-QMTIGLERVFEIASFYRAEKSHTGRHLSEFTSVDIE 232

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS 265
            +F++  D++N +E+++   F+  S
Sbjct: 233 AAFMDYTDVMNILEDLVLNTFKYVS 257



 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL     E++SGG R H  E +    S   +       +F    +AF  GMPPH G   
Sbjct: 346 FDLQYGYLELSSGGSRLHNPEKIKIRLSEQNLDPA----KFSEHLQAFDWGMPPHAGWGL 401

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++ ++LG  NVREV L+P
Sbjct: 402 GLERLLTVILGIDNVREVILYP 423


>gi|118575805|ref|YP_875548.1| aspartyl/asparaginyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118194326|gb|ABK77244.1| aspartyl/asparaginyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 425

 Score =  107 bits (266), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 140/296 (47%), Gaps = 24/296 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R H   D+     G  V L+GWV  +R  G + F+ +RD  G+ Q+V             
Sbjct: 6   RIH-IADMAKPMAGQKVLLAGWVEDLRELGKVSFVTLRDATGLAQIVVK--GGLQASMDG 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123
           +  + V+ + G V    AET   +    ++E+SA++I++LS A   LP+   G  E    
Sbjct: 63  LTRQSVVAVSGTV----AETRARDF---EVEVSAEQIDVLSRAIHPLPIDPLGRLESGMD 115

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R   R LD+R          R R++ S+R  +    F E +TP +  S+ EG  +    
Sbjct: 116 NRLNARALDMRNQKTASIFRLRHRVLESLRQGLSKRRFTEITTPKIIGSASEGGANLFSL 175

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++ A  Q+PQ YK+  M  G +R ++I+  +R E+  + R   EF  +D+E +F
Sbjct: 176 EYFGKTAYLA--QSPQLYKEQ-MTMGLERVYEISGFYRAENSHTGRHLSEFTSVDIEAAF 232

Query: 244 VEQDDILNTMENVLRG--------VFEEFSNGNT--VSNNFLRICYDDAIRRYGTD 289
           ++  D+++ +E ++R           E+ + G+   V ++  RI Y  A+   G+D
Sbjct: 233 MDYTDVMDVLEQLVREACVAASECTIEQEATGHKAEVPSDIPRITYSQAVDELGSD 288



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL     E++SGG R H   ++       G+   +    F    RAF  GMPPH G   
Sbjct: 340 FDLQHGYLELSSGGSRLHDPSILRSRLEQQGLDPAL----FADHLRAFDWGMPPHSGWGM 395

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+DR + +L+G  NVRE  L+P
Sbjct: 396 GLDRFMAVLVGVDNVREAVLYP 417


>gi|91070510|gb|ABE11417.1| aspartyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
           HOT0M-3E5]
          Length = 143

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 11/143 (7%)

Query: 456 HNPFTMPQGGMESLKGNDLLSIK-------AFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           H+PF  P+    ++K  D  +++       A  YDLV NG E+  G +R H + +  +  
Sbjct: 1   HHPFCSPK----NIKSKDPENLQKEIEDSTANAYDLVLNGLELGGGSLRIHEANLQREVL 56

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             VG++ + +  +FG L  A + G PPHGGIA G+DRI ML++GA ++RE   FP +Q  
Sbjct: 57  KTVGLTAKEINEKFGFLIEALEMGAPPHGGIAFGLDRITMLIIGADSIRETIAFPKNQQA 116

Query: 569 CDLLMGSPSTVSVEQLRELGLRI 591
             LL  +PS VS  QL+EL + I
Sbjct: 117 KCLLTNAPSNVSKSQLKELDIEI 139


>gi|322805344|emb|CBZ02908.1| aspartyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 429

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 129/259 (49%), Gaps = 19/259 (7%)

Query: 14  VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           +S++ +F    + L GW+H++R    I FL IRD  G+ Q + + D         V+ E 
Sbjct: 6   ISELKNFMNEKINLQGWIHKIRKLRNITFLIIRDRSGLIQCIVDNDKLDL---SQVKIES 62

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFK 127
           ++ I G+V+    E+ NA       E+  + +EI++ A ++LP+ +  E  E        
Sbjct: 63  IVSITGVVI----ESTNA---LNPFEIQVENLEIINAALDKLPIEINKENLEINLDTMLN 115

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R L LR   ++     +  I+N  R  +  E F E  TP +     EG  +        
Sbjct: 116 NRILSLRHSKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFE 175

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-Q 246
             ++  L Q+PQ YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+E+ F+E +
Sbjct: 176 NTAY--LAQSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDE 233

Query: 247 DDILNTMENVLRGVFEEFS 265
            DI+   E +L+ + E+ +
Sbjct: 234 KDIMEVEERLLKFILEKLN 252



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI +GG R H   +++      G + +  E+       AF+ GMP HGG+A 
Sbjct: 344 FDLLFRGIEITTGGQRIHDYNMLVDNMEFKGFNPKDYESYLS----AFKYGMPKHGGLAI 399

Query: 542 GIDRIVMLLLGAKNVREVSL 561
           G++R+   LLG +NVRE +L
Sbjct: 400 GLERLTSRLLGLENVREAAL 419


>gi|268325209|emb|CBH38797.1| aspartyl-tRNA synthetase [uncultured archaeon]
          Length = 437

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 134/286 (46%), Gaps = 17/286 (5%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
             ++  ++ G  V ++GWVH  R  GG+ FL +RD  G  Q+         E+   V+  
Sbjct: 16  TNEITAANAGERVSVAGWVHEKRDLGGVFFLIMRDLSGFAQITLPKKKVEPELFDRVKR- 74

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFK 127
                   V+    E  +        E+  Q++++LS A + LPL   G+       R  
Sbjct: 75  ---VPRESVVVVEGEVKSEKKAPNGYEIIPQQMDVLSEASQVLPLDTTGKVGAELDTRLD 131

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            RF+DLR +      + R+  + ++R        IE +TP + +++ EG       S   
Sbjct: 132 ARFMDLRTERTKHIFMIRSLTLRAIRDFFDERGLIEINTPKIVSAATEGGTALFPISYFE 191

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+PQ YKQ+LMASGFDR ++IAP FR E+  + +   E   +D+E++FV   
Sbjct: 192 REAF--LNQSPQLYKQILMASGFDRVYEIAPIFRAEEHDTTKHLNEATSVDVELAFVSDK 249

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN----------NFLRICYDDAI 283
           +++  +E ++  V+    +   ++            F RI Y +AI
Sbjct: 250 EVMALLEELIAFVYSRVVDYPGLAKLKVTLEVPAIPFRRITYAEAI 295



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E++SG  R H  E++ +     G+S +  E        AF+ GMPPH G   
Sbjct: 352 FDLMHPRLELSSGSQRVHSYELLKRQIETKGLSADSFEFYLD----AFRYGMPPHAGWGL 407

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++M +L   N+REV LFP
Sbjct: 408 GVERLLMSMLEIDNIREVVLFP 429


>gi|187778145|ref|ZP_02994618.1| hypothetical protein CLOSPO_01737 [Clostridium sporogenes ATCC
           15579]
 gi|187775073|gb|EDU38875.1| hypothetical protein CLOSPO_01737 [Clostridium sporogenes ATCC
           15579]
          Length = 429

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 131/260 (50%), Gaps = 19/260 (7%)

Query: 14  VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           +S++ +F    + L GW+H++R    I FL IRD  G+ Q +   D+   ++++ V+ E 
Sbjct: 6   ISELKNFMNKKINLQGWIHKIRKLKDITFLIIRDRSGLVQCIV--DNNKLDLSQ-VKIES 62

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFK 127
           ++ I G V   S   +N        E+  + +EI++ A +ELP+ +  E  E        
Sbjct: 63  IVSITGAV-KESTNNLNP------FEIQVENLEIINAALDELPVEINKENLEINLDTMLN 115

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R L LR   ++     +  I+N  R  +  E F E  TP +     EG  +        
Sbjct: 116 NRVLSLRHRKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFE 175

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-Q 246
             ++  L Q+PQ YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+E+ F+E +
Sbjct: 176 NTAY--LAQSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDE 233

Query: 247 DDILNTMENVLRGVFEEFSN 266
            DI+   E +L+ + E+ +N
Sbjct: 234 KDIMEIEERLLKFILEKLNN 253



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 4/80 (5%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI +GG R H   +++      G + +  E+        F+ GMP HGG+A 
Sbjct: 344 FDLLFRGIEITTGGQRIHDYNMLIDNMKFKGFNPKDYESYLS----VFKYGMPKHGGLAI 399

Query: 542 GIDRIVMLLLGAKNVREVSL 561
           G++R+   LLG +NVRE +L
Sbjct: 400 GLERLTARLLGLENVREAAL 419


>gi|254385093|ref|ZP_05000426.1| aspartyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194343971|gb|EDX24937.1| aspartyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 413

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 128/253 (50%), Gaps = 19/253 (7%)

Query: 7   HSCGDLGVSD----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-I 61
           H+   + VSD    V   V +SGWV+ +R    + F+ +RDH G+ QV    +    E +
Sbjct: 3   HTASRVLVSDLRAHVDQTVIVSGWVNALRLQRKMQFVILRDHSGMAQVTHKRNGGPLEAV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +S+  E  + I G    R  E    N+  G +EL  + IE+L++AE  PLP+  E   P
Sbjct: 63  IESLTPESAVRITG----RVVEAAQVNL--GGLELVPETIEVLNLAE-TPLPI-DENTGP 114

Query: 122 ESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           E  R  +RFLD+R R +       +T +   +R   +     E  TP L  ++ E   + 
Sbjct: 115 EH-RLDWRFLDVRKRASAQMVFAAQTTLEQGLREYAMQNGCTEMHTPKLMGTASESGAEV 173

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 ++ ++ A  Q+PQ YKQ+ +A+G DR F+I P FR E   + R   EF  +D+E
Sbjct: 174 FKLGYFDRSAYLA--QSPQFYKQMAVAAGIDRVFEIGPVFRAEPSYTSRHATEFTGVDVE 231

Query: 241 MSFVEQDDILNTM 253
           +S++  DD+ + M
Sbjct: 232 LSWI--DDVEDVM 242



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 4/67 (5%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             +DL+  G EI +G  R H S+V+L+      +  E +++        F+ G PPHGG+
Sbjct: 351 LSFDLLWKGLEITTGAQREHRSDVLLKQVEEKSMDTEPMQDYMN----IFRFGCPPHGGL 406

Query: 540 AAGIDRI 546
            AG+ RI
Sbjct: 407 GAGLGRI 413


>gi|156938222|ref|YP_001436018.1| aspartyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|156567206|gb|ABU82611.1| aspartyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 453

 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 135/276 (48%), Gaps = 22/276 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +YR     ++     G  VR++GWVH VR  G + FL +RD  G  QV        F + 
Sbjct: 2   KYRDLLVAEITPEMEGRRVRVAGWVHAVRSIGKLAFLILRDFSGTIQV-------TFRVP 54

Query: 63  KSVRSEWVLCIDGLVMSRSA---ETINANIITGQ--------IELSAQKIEILSVAEE-L 110
           K V  E       L+   S    E++   +   +        +ELS ++IE+L+ A+  L
Sbjct: 55  KDVSEEEKKRYKELIKKVSKIPPESVVMVVGVVRRDPRAPRGVELSGEEIEVLNEAKSPL 114

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           PL V G+ +     R   R +DLRR      +   +    ++R  + + NF+E  TP + 
Sbjct: 115 PLDVSGKVDAHIDTRLANRPIDLRRPESQAVLRLVSLSAKAIREYLYSLNFVEVFTPKII 174

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           AS  EG    LVP      + Y L Q+PQ YK+LL +S  +  F+IAP +R E+  +   
Sbjct: 175 ASGTEGGAQ-LVPVFYFGKTAY-LAQSPQLYKELLTSS-LEYVFEIAPAWRHEESDTPYH 231

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
             EF  +D+EM+F + +D++  +ENV++ V +   N
Sbjct: 232 LAEFISVDVEMAFADYNDVMKVLENVVKRVIDSVKN 267



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           PF   +GG E + G ++   ++F  DL     EI+SG  R H    + +     G++   
Sbjct: 346 PFYTKRGGKEVIGGKEVDLSESF--DLNWRHLEISSGSTRIHRRNELEEELKKRGLNP-- 401

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               F    + +  GMPPH G   G+ R+++ + G  NVR  S FP
Sbjct: 402 --ANFEWYLKWYDYGMPPHAGWGMGLQRLMVPVAGIPNVRLASTFP 445


>gi|332796317|ref|YP_004457817.1| aspartyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694052|gb|AEE93519.1| aspartyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 430

 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 132/242 (54%), Gaps = 12/242 (4%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAKSVRSEWVLCIDGL 76
           G  V ++GWVH +R  GG  F+ +RD  G+ Q+V +  ++  FE++K +  E V+ + G+
Sbjct: 16  GKEVTVAGWVHTIRDLGGKKFILLRDRSGLGQIVIDKSNTKAFELSKDLTQESVILVKGV 75

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRR 135
           V    A+    N     +E+ A ++EILS A+  LPL V G+       R + R LDLRR
Sbjct: 76  V---KADKRAPN----GVEIHANELEILSKAKAPLPLDVSGKVNADLDTRLRERLLDLRR 128

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             +   I  ++  I + R  + ++ F+E  TP + A++ EG           + +F A  
Sbjct: 129 LEMEAVIKIQSEAIRAFREYLYSQKFVEIFTPKIIATATEGGAQLFPVIYFGKEAFLA-- 186

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ YK+LL A   +R F++AP +R E+  +     EF   D+E++F + +DI+N +EN
Sbjct: 187 QSPQLYKELL-AGTIERVFEVAPAWRAEESDTPYHLSEFLSADIEVAFADYNDIMNIVEN 245

Query: 256 VL 257
            L
Sbjct: 246 TL 247



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    EIASG  RN+  EV+ +     G++       F    + F  GMPPH G+  
Sbjct: 345 FDLIYRWVEIASGSSRNYKREVLEEELKTRGLNIA----SFEFFLKWFDYGMPPHAGVGI 400

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+ R++ML  G +NV+E+SLFP
Sbjct: 401 GVQRLMMLFTGLQNVKEISLFP 422


>gi|255514185|gb|EET90447.1| aspartyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 430

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 12/261 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   DL  S  G  V L+GWVH VR  G + FL +RD  GI QV+         + +S
Sbjct: 3   RTHYIKDLSQSLDGKEVTLAGWVHEVRELGNLTFLLLRDSTGIIQVIGKRGV----VGES 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPES 123
           +  +  L  + ++  R    +N     G  EL  +++E L+ ++  +P  V G+      
Sbjct: 59  IIKDLSLPKESVIKVRGKVKVNKEAKAG-FELIPEEVENLNPLSTNIPFEVTGKVPVELD 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R++D+RR          + ++ +    M A  F +   P + A + EG  + L P
Sbjct: 118 TRLNFRYIDMRRLNTSAIFSIESTVLRAFTEGMYARGFSQIRPPGIVAEATEGGAE-LFP 176

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            +  +   Y L Q+PQ YKQL +  G D+ F I P +R E         E  Q+D+E+ F
Sbjct: 177 VQYFEYKTY-LAQSPQLYKQLAIIGGMDKVFMIVPAYRAEKSNDVYHLNESTQMDIEIGF 235

Query: 244 VEQDDIL----NTMENVLRGV 260
            + +D +     T+ ++++ V
Sbjct: 236 ADHNDAIALLSETVTDIIKAV 256



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD +  G EI+SG  R H  E++++A    G+  +     F     AF+CG PPH G + 
Sbjct: 345 YDFIYKGIEISSGAQRIHQPELLIEAIKKKGMDPK----SFEFYINAFRCGAPPHAGWSI 400

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIVM + G+ N+RE SLFP
Sbjct: 401 GLERIVMKITGSSNIRECSLFP 422


>gi|170761393|ref|YP_001786410.1| aspartyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|169408382|gb|ACA56793.1| aspartate--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 429

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 127/259 (49%), Gaps = 19/259 (7%)

Query: 14  VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           +S++ +F    + L GW+H++R    I FL IRD  G+ Q + + D         V+ E 
Sbjct: 6   ISELKNFMNEKINLQGWIHKIRKLRNITFLIIRDRSGLVQCIVDNDKLDL---SQVKIES 62

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFK 127
           ++ I G+V     E+ NA       E+  + +EI++ A ++LP+ +  E  E        
Sbjct: 63  IVSITGVV----RESTNA---LNPFEMQVENLEIINAALDKLPIEINKENLEINLDTMLN 115

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R L LR   ++     +  I+N  R  +  E F E  TP +     EG  +        
Sbjct: 116 NRILSLRHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFE 175

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-Q 246
             ++ A  Q+PQ YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+E+ F+E +
Sbjct: 176 NTAYLA--QSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDE 233

Query: 247 DDILNTMENVLRGVFEEFS 265
            DI+   E +L+ + E  +
Sbjct: 234 KDIMEVEERLLKFILERLN 252



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI +GG R H   +++      G + +  E+       AF+ GMP HGG+A 
Sbjct: 344 FDLLFRGIEITTGGQRIHDYNMLVDNMKFKGFNPKDYESYLS----AFKYGMPKHGGLAI 399

Query: 542 GIDRIVMLLLGAKNVREVSL 561
           G++R+   LLG +NVRE +L
Sbjct: 400 GLERLTSRLLGLENVREATL 419


>gi|153938666|ref|YP_001390367.1| aspartyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|152934562|gb|ABS40060.1| aspartate--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295318454|gb|ADF98831.1| aspartate--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 429

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 128/259 (49%), Gaps = 19/259 (7%)

Query: 14  VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           +S++ +F    V L GW+H++R    I FL IRD  G+ Q + + D         V+ E 
Sbjct: 6   ISELKNFINENVNLQGWIHKIRKLKNITFLIIRDRSGLIQCIVDNDKLDL---SQVKIES 62

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFK 127
           ++ I G+V     E+ NA       E+  + +EI++ A +++P+ +  E  E        
Sbjct: 63  IVSITGVV----KESTNA---LNPFEIQVENLEIINAALDKVPIEINKENLEINLDTMLN 115

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R L LR   ++     +  I+N  R  +  E F E  TP +     EG  +        
Sbjct: 116 NRILSLRHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFE 175

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-Q 246
             ++ A  Q+PQ YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+E+ F+E +
Sbjct: 176 NTAYLA--QSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDE 233

Query: 247 DDILNTMENVLRGVFEEFS 265
            DI+   E +L+ + E+ +
Sbjct: 234 KDIMEVEERLLKFILEKLN 252



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI +GG R H   +++      G + +  E+       AF+ GMP HGG+A 
Sbjct: 344 FDLLFRGIEITTGGQRIHDYNMLVDNMEFKGFNPKDYESYLS----AFKYGMPKHGGLAI 399

Query: 542 GIDRIVMLLLGAKNVREVSL 561
           G++R+   LLG +NVRE +L
Sbjct: 400 GLERLTSRLLGLENVREAAL 419


>gi|169344439|ref|ZP_02865408.1| aspartyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169297359|gb|EDS79468.1| aspartyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 429

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 15/242 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           + GW++++R    I F+ IRD  G+ Q VA  + +      ++  E V+ I+G  +  S 
Sbjct: 19  IKGWIYKIRRLKFITFIIIRDRSGLVQCVAENEKSDL---SNLTLESVVSIEG-TLKESK 74

Query: 83  ETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFKYRFLDLRRDTLHK 140
            ++N+       E+  + IEI++ A EELP+ V  E  +         R L LR   ++ 
Sbjct: 75  NSLNS------FEIQVENIEIINKAKEELPIEVNKETLDINLDTMLNNRMLSLRHKKINA 128

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
               +  I +S R  +  E F E  TP +     EG  +          ++  L Q+PQ 
Sbjct: 129 IFKVQNIITDSFREFLNKEGFTEIHTPKIVKEGAEGGTEVFEVKYFENKAY--LAQSPQF 186

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRG 259
           YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+EM F+E + DI+N  EN+L+ 
Sbjct: 187 YKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEMGFIENEFDIMNLEENLLKF 246

Query: 260 VF 261
           + 
Sbjct: 247 IL 248



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 15/103 (14%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +TMP+G     KG          +DL+  G EI +GG R H  E++++     G++    
Sbjct: 332 YTMPKGE----KG-------THSFDLLFRGIEITTGGQRIHDYEMLVENMKYKGLNP--- 377

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
            N +      F+ GMP HGG+A G++RI   +LG +NVRE +L
Sbjct: 378 -NSYESYLELFKLGMPKHGGLAIGLERITARILGLENVREATL 419


>gi|148379009|ref|YP_001253550.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153933421|ref|YP_001383393.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153936074|ref|YP_001386940.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|148288493|emb|CAL82572.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152929465|gb|ABS34965.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152931988|gb|ABS37487.1| aspartate--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 429

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 128/259 (49%), Gaps = 19/259 (7%)

Query: 14  VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           +S++ +F    + L GW+H++R    I FL IRD  G+ Q + + D         V+ E 
Sbjct: 6   ISELKNFMNEKINLQGWIHKIRKLRNITFLIIRDRSGLIQCIVDNDKLDL---SQVKIES 62

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFK 127
           ++ + G+V     E+ NA       E+  + +EI++ A ++LP+ +  E  E        
Sbjct: 63  IVSLTGVV----KESTNA---LNPFEIQVENLEIINAALDKLPIEINKENLEINLDTMLN 115

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R L LR   ++     +  I+N  R  +  E F E  TP +     EG  +        
Sbjct: 116 NRILSLRHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFE 175

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-Q 246
             ++ A  Q+PQ YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+E+ F+E +
Sbjct: 176 NTAYLA--QSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDE 233

Query: 247 DDILNTMENVLRGVFEEFS 265
            DI+   E +L+ + E+ +
Sbjct: 234 KDIMEVEERLLKFILEKLN 252



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI +GG R H   +++      G + +  E+       AF+ GMP HGG+A 
Sbjct: 344 FDLLFRGIEITTGGQRIHDYNMLVDNMEFKGFNPKDYESYLS----AFKYGMPKHGGLAI 399

Query: 542 GIDRIVMLLLGAKNVREVSL 561
           G++R+   LLG +NVRE +L
Sbjct: 400 GLERLTSRLLGLENVREAAL 419


>gi|311897070|dbj|BAJ29478.1| putative aspartyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 435

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 133/267 (49%), Gaps = 19/267 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVL 71
           S +   V + GW++ +R    + F+ +RDH G+ QV         EI  +   V +E  +
Sbjct: 11  SHLDETVTVYGWINTLRLQRRMQFVLVRDHTGLIQVTHARGGEGDEIEAAFERVTAESAV 70

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130
            I G V+       N  +  G +E+  +++E++S AE +LP+    +       R  +RF
Sbjct: 71  KITGKVVG------NPQVKLGGLEIVPERVEVVSPAEPKLPI----DEHTGLDQRLDWRF 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LD+RR + H     +T +  +MR     E F E  TP L  ++ E   +        + +
Sbjct: 121 LDIRRPSQHLVFAVQTTVEQAMREVTAEEGFTELHTPKLMGTASESGAEVFKVDYFERTA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDI 249
           + A  Q+PQ YKQ+ +A+G D+ F+I P FR E   + R   EF  +D E+++++  +D+
Sbjct: 181 YLA--QSPQFYKQMAIAAGIDKVFEIGPVFRAEPSFTSRHATEFTGVDAELAWIDGVEDV 238

Query: 250 LNTMENVLRGVFEEFS--NGNTVSNNF 274
           +   E +L+ V    S  +G+ V+ +F
Sbjct: 239 MAFEERLLQRVLRRVSERHGDAVTEHF 265


>gi|41615317|ref|NP_963815.1| hypothetical protein NEQ535 [Nanoarchaeum equitans Kin4-M]
 gi|40069041|gb|AAR39376.1| NEQ535 [Nanoarchaeum equitans Kin4-M]
          Length = 404

 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 136/275 (49%), Gaps = 31/275 (11%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            +++ GWVH+VR  G I FL IRD Y I Q V         I K    +++L +D  + S
Sbjct: 5   LMQIKGWVHKVRDLGKIKFLLIRDGYKIMQAV---------IKKGESPDYLLDLDIPIES 55

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR---RD 136
                       G+ E+  + ++IL+ AE  PLP+  ++  P+  RF YR +DL+   R 
Sbjct: 56  AVEIEGEERETNGKKEILVKDLKILAKAE--PLPIDPKKATPKK-RFDYRIIDLKLPERQ 112

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFLVPSRVNQGSFYALP 195
           TL +    R ++    R   +   F+E +TP I+   +  GA  F V   +  G    L 
Sbjct: 113 TLFRL---RAKVQKFFRDWFMENGFVEINTPKIVIIGAESGAEVFPV---LYFGKEAYLT 166

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTME 254
           Q+PQ YKQ +M S F + F+IA  +R E  R+ R   EF  +D EM F++ + D++NT++
Sbjct: 167 QSPQLYKQ-MMVSVFPKVFEIAFAYRAEPSRTSRHLAEFTSVDAEMGFIKDEYDVINTIK 225

Query: 255 NVLRGVFE------EFSN-GNTVSNNFLRICYDDA 282
            +L  V E      EF      +   F  I +D+A
Sbjct: 226 KMLIDVSEKAMQTKEFEELAKPIDLGFEIITFDEA 260



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D++  G EI SG  R H  E +L+     GI      N+      AF+ GMPPHGG   
Sbjct: 319 FDIIFRGLEIISGAQREHRYEKLLENIKEKGIDP----NKLEYYLMAFKYGMPPHGGFGL 374

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R +  LLG  +VREV LF
Sbjct: 375 GLERYLRQLLGLDDVREVILF 395


>gi|255524356|ref|ZP_05391313.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296187481|ref|ZP_06855876.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255511913|gb|EET88196.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048003|gb|EFG87442.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 427

 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 128/247 (51%), Gaps = 20/247 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + GWVH+V       F+ +RD  GI Q+V        E+ K +R E  L + G  ++ 
Sbjct: 17  VLVKGWVHKVIDFKNFGFVHLRDKTGIIQLVVGK-----ELLKGLRLEMSLEVVGTKVAN 71

Query: 81  SAETINANIITGQIELSAQKIEIL--SVAEELPLPVFGEREYPESI--RFKYRFLDLRRD 136
                      G IEL  +++++L  +  ++LP+ V  ER+    +  +  YR++ LR  
Sbjct: 72  EK-------APGGIELQVKELKVLGKTYYDKLPITV-NERKSSAHLETQLDYRYISLRNP 123

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                   +  I+ + R  ++  +F E  TP +  +S EG  +    +  ++ +F  L Q
Sbjct: 124 KTRAAFKVQQEIVTAFREYLLQNDFSEIHTPKILGASTEGGSEVFTINYFDKRAF--LAQ 181

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMEN 255
           +PQ +KQ+++ +GF++ F+IAP +R E   + R   E+  LD+EM F+ +++DI++  E 
Sbjct: 182 SPQFFKQMMVGAGFEKVFEIAPAYRAELHNTYRHLNEYISLDLEMGFIKDENDIMDLEEG 241

Query: 256 VLRGVFE 262
            +R +F+
Sbjct: 242 FMRHLFQ 248



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI +GG R H  E++ +     G + E     +G    +F+ GMPPHGG+A 
Sbjct: 342 FDLIYKGLEITTGGQRIHDYEMLKENIKKFGFNPE----DYGFYLESFRYGMPPHGGLAI 397

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RI M +L   N+RE +L P
Sbjct: 398 GLERITMKILNLSNIREATLLP 419


>gi|328950831|ref|YP_004368166.1| aspartyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451155|gb|AEB12056.1| aspartyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 426

 Score =  103 bits (257), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 141/302 (46%), Gaps = 36/302 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V L GW+H  R  GGI F+ +RD  G+ QVV  P      + +S      + + G 
Sbjct: 13  VGERVTLMGWLHWRRDLGGIQFVLLRDRSGVVQVVL-PGGGKLPLQESS-----IRVTGT 66

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY----PESIRFKYRFLD 132
           V       + ++   G +E+ A+ +E+LS A   P PV   +E     PE++  +YR++ 
Sbjct: 67  V-------VESDKAPGGLEVHAEGLEVLSPAT-APTPVEIPKEEWRANPETL-LEYRYVT 117

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +     +  +  ++   R  + A  F E  TP +  +  EG  +        Q ++ 
Sbjct: 118 LRGEKARAPLQVQAALVRGFRKYLDAAGFTEVYTPKIVQAGAEGGTNLFPVEYFEQRAYL 177

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILN 251
           A  Q+PQ YKQ+L+   ++R +++AP +R E+  + R   E+  LD+EM F+E  ++++ 
Sbjct: 178 A--QSPQLYKQILVGV-YERVYEVAPVWRAEEHATSRHLNEYLSLDVEMGFIESHEEVMR 234

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN--PIIMHNVTEHFVHS 309
               ++R + EE            R   + A+R  G + P +    P++ H      V  
Sbjct: 235 LETELIRAMLEE-----------ARASAERALRLLGVELPPVPKEIPVLEHQEARRIVKE 283

Query: 310 EF 311
           E 
Sbjct: 284 EL 285



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G E+ SGG R H  E ++++    G+  +     F G    F+ GMPPHGG A 
Sbjct: 341 FDLLFRGLEVTSGGQRIHRYEDLVESLQRHGLDPQA----FRGYLEVFKYGMPPHGGFAI 396

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+   LLG  NVR    FP  ++
Sbjct: 397 GAERLTQKLLGLPNVRYARAFPRDRH 422


>gi|315051818|ref|XP_003175283.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311340598|gb|EFQ99800.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 632

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 156/384 (40%), Gaps = 41/384 (10%)

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
           + LDMEMSF   +D++ T E +++ ++            F R+ Y +A+  YG+DKPD R
Sbjct: 257 FLLDMEMSFATAEDVMATTEALVKKLWASIMPEPLGPEPFSRMSYYEAMGLYGSDKPDTR 316

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGN--RAFCDRMNE----- 346
             + +  V +           KI S++ P  E + +   G      R     MN      
Sbjct: 317 FDMKLRRVDQSLPPD---FIGKIGSLDSPAVEAFLVRGNGCPKETMRVLQGFMNTPEAKP 373

Query: 347 -WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA---IRVRLDMQDGDSCFF- 401
                 G PG     + +D S  + G       L+    EA   +    + + GD  FF 
Sbjct: 374 FLDNPDGAPGT----FVIDSSKPMTG-------LSAAGFEAAWGLETLFEPEHGDLLFFQ 422

Query: 402 ------IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK---- 451
                  +G  +K          ++ ++        F F W+  FP +  + E +     
Sbjct: 423 CRKDEPFSGGSIKAGELRLAVHQYLVEKGFYSPPVGFNFHWVTGFPLFSPSVETEPGQGG 482

Query: 452 ---IDFAHNPFTMPQGGMES-LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
              I   H+PFT P+   ++ L   D     A  YDLV NG E+  G  R H + V    
Sbjct: 483 TAGIASTHHPFTAPRTAEDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSAAVQEFI 542

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             ++          F  L    + G PPH GIA G DR++ ++ G ++VR V  FP    
Sbjct: 543 LRDILKVPPSRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTQSVRNVIAFPKGNK 602

Query: 568 FCDLLMGSPSTVSVEQLRELGLRI 591
             D ++ +PS ++ + L+   L++
Sbjct: 603 GEDPMVKTPSPMTEDSLQTYHLQL 626


>gi|161528379|ref|YP_001582205.1| aspartyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339680|gb|ABX12767.1| aspartyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 436

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 131/253 (51%), Gaps = 18/253 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFE 60
           R+H   ++  S  G+ V + GWV  VR HG I F  IRD  G   VVA     PD    +
Sbjct: 11  RSHYSDEINSSMDGTQVTVMGWVLTVRGHGNISFATIRDKNGDVSVVAKKGDCPDDIREK 70

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL--PVFGER 118
           I+  +++   + I G V  +S+E   +       E+   ++ + S  E++P   P+    
Sbjct: 71  IS-YLKAHSSIAITGNV--KSSEKAPSGY-----EIVPTELRVFSEVEKIPPFEPIAKTV 122

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  ++ R + R +DLRR  L      R+ ++ S+R     +NF+E +TP + A++ EG  
Sbjct: 123 KNIDT-RLEVRPIDLRRKVLQHIFNTRSLVLKSIRSYFNDQNFVEINTPKMIATATEGGA 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                   N+ +F A  Q+PQ YK+ L  S F++ F+IAP FR E  R++R   E   +D
Sbjct: 182 ALFPIFYYNKEAFLA--QSPQLYKEQLTMS-FEKVFEIAPIFRAEPSRTNRHLAEAISID 238

Query: 239 MEMSFVEQDDILN 251
           +E +F++ +D+++
Sbjct: 239 LEEAFIDYNDVMS 251



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E++SG  R      + +   N G++ +  E   G    AF  G+PPH G   
Sbjct: 351 FDLMFGDLELSSGSTRIEKRNELAERMKNKGMNTDAFEYHLG----AFDYGVPPHAGCGI 406

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++M L G +N+R+V+ +P
Sbjct: 407 GLERLIMALTGTENIRDVTFYP 428


>gi|52080744|ref|YP_079535.1| asparaginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52786115|ref|YP_091944.1| asparaginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319645298|ref|ZP_07999531.1| asparaginyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|81385241|sp|Q65I63|SYN_BACLD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|52003955|gb|AAU23897.1| asparaginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52348617|gb|AAU41251.1| AsnS [Bacillus licheniformis ATCC 14580]
 gi|317393107|gb|EFV73901.1| asparaginyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 430

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 124/286 (43%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A  D   F+ AKSV  E  L +
Sbjct: 12  VGEEVTIGAWIANKRSSGKIAFLQLRDGTGFIQGVVVKAEVDEETFQTAKSVTQETSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V       +         EL+   +E++  A + P+     +E+       +R L L
Sbjct: 72  KGVVKEDERSPLG-------YELAVTSLEVIHEATDYPI---TPKEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +       E F++   PILT S+PEG  +       ++ ++  
Sbjct: 122 RSKRQHATMKIRNEIIRATYEFFNKEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L   
Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFNENLEVQ 238

Query: 254 EN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284
           EN    +++ V E           + S    +   F RI YD+AI+
Sbjct: 239 ENYVSFIVQSVLENCKIELNTLGRDTSKLELIKAPFPRITYDEAIQ 284


>gi|179102|gb|AAA35567.1| aspartyl-tRNA synthetase [Homo sapiens]
          Length = 500

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 163/358 (45%), Gaps = 49/358 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL +      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 49  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV--------FGE 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL +         GE
Sbjct: 109 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEQEGE 166

Query: 118 RE----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            E      +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 167 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 226

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 227 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 284

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F     TV+  F           LR
Sbjct: 285 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 344

Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++ H V E +  ++F +  K  L+V P Y
Sbjct: 345 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 401



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + G   E ++        +F+ G PPH G   
Sbjct: 415 YDMFMRGEEILSGAQRIHDPQLLTERALHHGNDLEKIK----AYIDSFRFGAPPHAGGGI 470

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 471 GLERVTMLFLGLHNVRQTSMFP 492


>gi|170583906|ref|XP_001896781.1| hypothetical protein [Brugia malayi]
 gi|158595913|gb|EDP34374.1| conserved hypothetical protein [Brugia malayi]
          Length = 218

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 96/200 (48%), Gaps = 12/200 (6%)

Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
             F+ GD           R+ + + + +      EF WI  FP +  N E  +++ AH+P
Sbjct: 2   VLFMWGDDTCVKRTLGQLRHLVGEAMHLRAEQRMEFVWITHFPLFSRNAE-GRLESAHHP 60

Query: 459 FTMPQGGMESL--KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISK 515
           FT P      L  + N LLSI    YDLV NG E+  G IR H ++V     S + G S 
Sbjct: 61  FTAPIPDDVPLLYEPNKLLSITGQHYDLVLNGVELGGGSIRIHNADVQRHVLSTIYGESL 120

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDL 571
           E +E+    + +A   G PPHGG A G+DR V LL G  B    +R+V  FP S+   DL
Sbjct: 121 EEMEH----MIKALSYGAPPHGGFAIGLDRYVALLFGRGBSSVPIRDVIAFPKSKEGNDL 176

Query: 572 LMGSPSTVSVEQLRELGLRI 591
           +   P   +  QL   G+ +
Sbjct: 177 MTKCPVEATPSQLSRYGISV 196


>gi|170754606|ref|YP_001780645.1| aspartyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169119818|gb|ACA43654.1| aspartyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 429

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 128/259 (49%), Gaps = 19/259 (7%)

Query: 14  VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           +S++ +F    V L GW+H++R    I FL IRD  G+ Q + + D         V+ E 
Sbjct: 6   ISELKNFINENVNLQGWIHKIRKLKNITFLIIRDRSGLIQCIVDNDKLDL---SQVKIES 62

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFK 127
           ++ + G+V     E+ NA       E+  + +EI++ A +++P+ +  E  E        
Sbjct: 63  IVSMTGVV----KESTNA---LNPFEIQVENLEIINAALDKVPIEINKENLEINLDTMLN 115

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R L LR   ++     +  I+N  R  +  E F E  TP +     EG  +        
Sbjct: 116 NRILSLRHPKVNSIFKVQNSIVNGFREFLNKEEFTEIYTPKIVWEGAEGGTEVFKVKYFE 175

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-Q 246
             ++ A  Q+PQ YKQ+++ +GF++ F+I   +R E+  ++R   E+  +D+E+ F+E +
Sbjct: 176 NTAYLA--QSPQFYKQMMVGAGFEKVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDE 233

Query: 247 DDILNTMENVLRGVFEEFS 265
            DI+   E +L+ + E+ +
Sbjct: 234 KDIMEVEERLLKFILEKLN 252



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI +GG R H   +++      G + +  E+       AF+ GMP HGG+A 
Sbjct: 344 FDLLFRGIEITTGGQRIHDYNMLVDNIDFKGFNPKDYESYLS----AFKYGMPKHGGLAI 399

Query: 542 GIDRIVMLLLGAKNVREVSL 561
           G++R+   LLG +NVRE +L
Sbjct: 400 GLERLTSRLLGLENVREAAL 419


>gi|311068749|ref|YP_003973672.1| asparaginyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310869266|gb|ADP32741.1| asparaginyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 430

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 123/285 (43%), Gaps = 31/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  WV   R  G I FL +RD  G  Q   V A  D   F+ AKSV  E  L +
Sbjct: 12  VGQEVTIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVDETIFQTAKSVTQETSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V       +         EL+   IE++  A + P+     +E+       +R L L
Sbjct: 72  KGIVKEDERSPLG-------FELAVTSIEVIHEATDYPI---TPKEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +       E F++   PILT S+PEG  +       ++ ++  
Sbjct: 122 RSKRQHAIMKIRNEIIRATYEFFNNEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L   
Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFNENLEVQ 238

Query: 254 EN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
           EN    V++ V E           + S    +   F RI YD+A+
Sbjct: 239 ENYVSFVVQSVLENCKIELNTLGRDTSKLEQIKAPFPRITYDEAL 283


>gi|168178430|ref|ZP_02613094.1| aspartyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670401|gb|EDT82375.1| aspartyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 429

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 128/259 (49%), Gaps = 19/259 (7%)

Query: 14  VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           +S++ +F    + L GW+H++R    I FL IRD  G+ Q + + D         V+ E 
Sbjct: 6   ISELKNFMNEKINLQGWIHKIRKLRNITFLIIRDRSGLIQCIVDNDKLDL---SQVKIES 62

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFK 127
           ++ + G+V     E+ NA       E+  + +EI++ A +++P+ +  E  E        
Sbjct: 63  IVSLTGVV----RESTNA---LNPFEIQVENLEIINAALDKVPIEINKENLEINLDTMLN 115

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R L LR   ++     +  I+N  R  +  E F E  TP +     EG  +        
Sbjct: 116 NRILSLRHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFE 175

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-Q 246
             ++ A  Q+PQ YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+E+ F+E +
Sbjct: 176 NTAYLA--QSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDE 233

Query: 247 DDILNTMENVLRGVFEEFS 265
            DI+   E +L+ + E+ +
Sbjct: 234 KDIMEVEERLLKFILEKLN 252



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI +GG R H   +++      G + +  E+       AF+ GMP HGG+A 
Sbjct: 344 FDLLFRGIEITTGGQRIHGYNMLVDNMEFKGFNPKDYESYLS----AFKYGMPKHGGLAI 399

Query: 542 GIDRIVMLLLGAKNVREVSL 561
           G++R+   LLG +NVRE +L
Sbjct: 400 GLERLTSRLLGLENVREAAL 419


>gi|229133032|ref|ZP_04261873.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228650450|gb|EEL06444.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 437

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 23/267 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C +      G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 10  MKRSLTRECTE----HSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVVQCVLENELAGYK 65

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G +++ +   +        +E+ A ++++L+ AE+LP  +  ++ +
Sbjct: 66  ----VDVESVVQVIGEIVTTTKTELG-------VEVLAHEVKVLNGAEQLPFEINKKKLQ 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 115 VGLDQLLNERVLSLRHERIAAIFKVKSTLVQSFSEFLIENDFTRVFTPKIVSQGAEGGAN 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S   + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 175 VFKLSYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 232

Query: 240 EMSFVEQDDILNTME---NVLRGVFEE 263
           E+ F+  +D    M+   +VLR +F++
Sbjct: 233 ELGFI--NDFYEVMQLETDVLRYMFQQ 257



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  +++L +F   G+  E    +F      F+ G PPHGG   
Sbjct: 352 FDLLYKGLEITSGAQRIHNHDMLLASFKEKGLHSE----KFQSYLDTFRYGCPPHGGFGI 407

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV   L   NVRE S FP
Sbjct: 408 GLERIVYKFLELTNVREASAFP 429


>gi|226948294|ref|YP_002803385.1| aspartate--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226840940|gb|ACO83606.1| aspartate--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 429

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 128/259 (49%), Gaps = 19/259 (7%)

Query: 14  VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           +S++ +F    V L GW+H++R    I FL IRD  G+ Q + + D         V+ E 
Sbjct: 6   ISELKNFINENVNLQGWIHKIRKLKNITFLIIRDRSGLIQCIVDNDKLDL---SEVKIES 62

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFK 127
           ++ + G+V     E+ NA       E+  + +EI++ A +++P+ +  E  E        
Sbjct: 63  IVSMTGVV----KESTNA---LNPFEIQVENLEIINAALDKVPIEINKENLEINLDTMLN 115

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R L LR   ++     +  I+N  R  +  E F E  TP +     EG  +        
Sbjct: 116 NRILSLRHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFE 175

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQ 246
             ++ A  Q+PQ YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+E+ F+ ++
Sbjct: 176 NTAYLA--QSPQFYKQMMVVAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIKDE 233

Query: 247 DDILNTMENVLRGVFEEFS 265
            DI+   E +L+ + E+ +
Sbjct: 234 KDIMEVEERLLKFILEKLN 252



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 4/80 (5%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI +GG R H   +++      G++ +  E+       AF+ GMP HGG+A 
Sbjct: 344 FDLLFRGIEITTGGQRIHDYNMLVDNMEFKGLNPKDYESYLS----AFKYGMPKHGGLAI 399

Query: 542 GIDRIVMLLLGAKNVREVSL 561
           G++R+   LLG +NVRE +L
Sbjct: 400 GLERLTSRLLGLENVREAAL 419


>gi|168217437|ref|ZP_02643062.1| aspartyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182380537|gb|EDT78016.1| aspartyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 429

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 15/242 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           + GW++++R    I F+ IRD  G+ Q VA  + +      ++  E V+ I+G  +  S 
Sbjct: 19  IKGWIYKIRRLKFITFIIIRDRSGLVQCVAENEKSDL---SNLTVESVVSIEG-ALKESK 74

Query: 83  ETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFKYRFLDLRRDTLHK 140
            ++N+       E+  + IEI++ A EEL + V  E  +         R L LR   ++ 
Sbjct: 75  NSLNS------FEIQVENIEIINKAKEELKIEVNKETLDINLDTMLNNRMLSLRHKKINS 128

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
               +  I +S R  +  E F E  TP +     EG  +          ++  L Q+PQ 
Sbjct: 129 IFKVQNIITDSFREFLNKEGFTEIHTPKIVKEGAEGGTEVFEVKYFENKAY--LAQSPQF 186

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRG 259
           YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+EM F+E + DI+N  EN+L+ 
Sbjct: 187 YKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYVSMDLEMGFIENEFDIMNLEENLLKF 246

Query: 260 VF 261
           + 
Sbjct: 247 IL 248



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 15/103 (14%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +TMP+G     KG          +DL+  G EI +GG R H  E++++     G++    
Sbjct: 332 YTMPKGE----KG-------THSFDLLFRGIEITTGGQRIHDYEMLVENMKYKGLNP--- 377

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
            N +      F+ GMP HGG+A G++RI   +LG +NVRE +L
Sbjct: 378 -NSYESYLELFKLGMPKHGGLAIGLERITARILGLENVREATL 419


>gi|168182869|ref|ZP_02617533.1| aspartate--tRNA ligase [Clostridium botulinum Bf]
 gi|237794310|ref|YP_002861862.1| aspartyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182673947|gb|EDT85908.1| aspartate--tRNA ligase [Clostridium botulinum Bf]
 gi|229263481|gb|ACQ54514.1| aspartate--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 429

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 126/260 (48%), Gaps = 21/260 (8%)

Query: 14  VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           +S++ +F    + L GW+H++R    I FL IRD  G+ Q + + D         V+ E 
Sbjct: 6   ISELKNFMNEKINLQGWIHKIRKLKNITFLIIRDRSGLVQCIVDNDKLDL---SQVKIES 62

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---SIRF 126
           ++ I G+V   S   +N        E+  + +EI++ A + P P+   +E  E       
Sbjct: 63  IVSITGVV-KESTNGLNP------FEIQVENLEIINAALDKP-PIEINKENLEINLDTML 114

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR   ++     +  I+N  R  +  E F E  TP +     EG  +       
Sbjct: 115 NNRILSLRHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYF 174

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE- 245
              ++ A  Q+PQ YKQ+++ +GF++ F+I   +R E+  ++R   E+  +D+E+ F+E 
Sbjct: 175 ENTAYLA--QSPQFYKQMMVGAGFEKVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIED 232

Query: 246 QDDILNTMENVLRGVFEEFS 265
           + DI+   E +L+ + E+ +
Sbjct: 233 EKDIMEVEERLLKFILEKLN 252



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 4/80 (5%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI +GG R H   +++      G + +  E+        F+ GMP HGG+A 
Sbjct: 344 FDLLFRGIEITTGGQRIHDYSMLIDNMKFKGFNPKDYESYLS----VFKYGMPKHGGLAI 399

Query: 542 GIDRIVMLLLGAKNVREVSL 561
           G++R+   LLG +NVRE +L
Sbjct: 400 GLERLTARLLGLENVREAAL 419


>gi|114581050|ref|XP_001155013.1| PREDICTED: aspartyl-tRNA synthetase isoform 2 [Pan troglodytes]
 gi|114581052|ref|XP_001155062.1| PREDICTED: aspartyl-tRNA synthetase isoform 3 [Pan troglodytes]
          Length = 468

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL +      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 17  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 76

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114
            E ++ I+G+V  R       +     +EL  QKI ++S+AE  LPL +           
Sbjct: 77  KESIVDIEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 134

Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 135 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 194

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 195 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 252

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F     TV+  F           LR
Sbjct: 253 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 312

Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++ H V E +  ++F +  K  L+V P Y
Sbjct: 313 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 369



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 383 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 438

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 439 GLERVTMLFLGLHNVRQTSMFP 460


>gi|302337560|ref|YP_003802766.1| aspartyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301634745|gb|ADK80172.1| aspartyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 423

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 154/340 (45%), Gaps = 49/340 (14%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           C D+  S+ G  V + GW+HR+R  GG+ F+ +RD  G+ Q+V       FE A  V  E
Sbjct: 5   CKDIAGSN-GQEVEVKGWIHRIRDLGGVCFIMLRDRSGMVQLV-------FESAPDVTLE 56

Query: 69  WVLCIDGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
            V+ ++G V        N     G +I++S  K+ +   A +LP+ V G+   P+ +  +
Sbjct: 57  SVVSVEGTVQE------NKKAPDGYEIQVSTMKV-LSRAAADLPIQVNGD---PDKLGIE 106

Query: 128 Y----RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
                R + LR   +      ++ I+      + +++F E  +  L  S  EG       
Sbjct: 107 AILDNRVISLRNPKIRSIFHLQSNILAYFAEYLRSQDFTEIKSSKLIGSGSEGGTGLFEV 166

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              ++  +  L Q+PQ YKQ ++ASG +R F+I   +R E   + R   E+  LD+EM F
Sbjct: 167 EYFDRKVY--LAQSPQLYKQTMVASGMERVFEIGAAYRAEKHDTPRHLNEYVSLDVEMGF 224

Query: 244 VEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI-RRYGTDKPDLRN----PI 297
           +E D D+++    +L+ +F   +             YD +I  ++G   P        P 
Sbjct: 225 IESDQDLMDLETGILKHIFGRIAE------------YDGSILEQWGASVPSQEALDHIPR 272

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYE----VWAIPAKG 333
           I H+  +  +    R+  ++  +NP  E     WA+   G
Sbjct: 273 ISHDEAKAILSE--RLGKRVFELNPEGERELCEWALEKHG 310



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +K   +DL+  G EI SG  R +  +++++     G+          G    F+ G PPH
Sbjct: 333 MKTMSFDLLFRGLEITSGSRRINEYDMLVENIKRFGLDP----AGLAGYLEVFKYGAPPH 388

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG A G++R    +LG  +++E SLFP
Sbjct: 389 GGFAIGLERFTQKVLGLSSIKEASLFP 415


>gi|325679651|ref|ZP_08159226.1| nucleic acid-binding domain protein [Ruminococcus albus 8]
 gi|324108681|gb|EGC02922.1| nucleic acid-binding domain protein [Ruminococcus albus 8]
          Length = 444

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 20/256 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLC 72
           +++G  +++ G+V   R    + F+ ++D  G  QV    +      E    +  + V+ 
Sbjct: 11  ANLGETIKVQGFVENFRNSRAMAFIVVKDITGKLQVTVEKEKHPELNEKLDMLTGDSVVT 70

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-----PVFGEREYPE--SI- 124
           I G VM       N  +  G +E+  + I   S+A+ LP+     P   +++  E  SI 
Sbjct: 71  IIGQVME------NDYVKLGGLEMIPEDIICESIADALPITRKEIPATKKKKAVERSSID 124

Query: 125 -RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  YR++DLR D        +T  +N+MR  ++ +NFIE  TP L  ++ E        
Sbjct: 125 QRIDYRWIDLRTDENQLMFKVQTCFVNAMRNFLLGQNFIEIHTPKLIGAASESGSSVFEV 184

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              ++ ++  L Q+PQ YKQ+ MASGF+R F++ P FR E   + +   EF   D+E S+
Sbjct: 185 EYFDRKAY--LAQSPQFYKQMAMASGFERIFEVGPVFRAEKSYTSKHTTEFTGFDLEFSY 242

Query: 244 VEQ-DDILNTMENVLR 258
           +E   D++   E +L+
Sbjct: 243 IESYKDVMAMEEQLLK 258



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 5/71 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+  G EI +G  R H  E++ +     G+ ++V   +F      F+ G PPHGG   
Sbjct: 361 YDLIWRGVEITTGAQREHRYEILKKQAQEKGLDEDV---KF--YLEFFKYGCPPHGGFGL 415

Query: 542 GIDRIVMLLLG 552
           G+DR+ MLL G
Sbjct: 416 GVDRLTMLLTG 426


>gi|327260634|ref|XP_003215139.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 503

 Score =  101 bits (252), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 160/357 (44%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL        V + G VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 52  DLTGEKADEVVWVRGRVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 111

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117
            E ++ I+G+V  R             +EL  Q+I ++S+AE  LPL         V GE
Sbjct: 112 KESIVDIEGVV--RKVPHKIGGCTQQDVELHVQRIYVISLAEPRLPLQLDDAIRPEVDGE 169

Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            E   ++    R   R +DLR  T       ++ I    R  +I + F+E  TP + +++
Sbjct: 170 EEGRATVNQDTRLDNRVIDLRTCTSQAVFRLQSGICQLFRETLIQKGFVEIQTPKIISAA 229

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + FD+ F I P FR ED  + R   E
Sbjct: 230 SEGGANVFTVSYFKSNAYLA--QSPQLYKQMCICADFDKVFCIGPVFRAEDSNTHRHLTE 287

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        D+I +TM  + +G+ E F     TVS  F           LR
Sbjct: 288 FVGLDIEMAFNYHYHEVVDEIADTMVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 347

Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + + +A   +R  G    D+ DL  P   ++  + +    ++F +  K  L+V P Y
Sbjct: 348 LEFPEALAMLREAGVEMGDEDDLSTPSEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 404



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 418 YDMFMRGEEILSGAQRVHDPQLLTERAMHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 473

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 474 GLERVTMLYLGLSNVRQTSMFP 495


>gi|114581044|ref|XP_515810.2| PREDICTED: aspartyl-tRNA synthetase isoform 5 [Pan troglodytes]
 gi|114581046|ref|XP_001155169.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 4 [Pan
           troglodytes]
          Length = 501

 Score =  101 bits (252), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL +      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114
            E ++ I+G+V  R       +     +EL  QKI ++S+AE  LPL +           
Sbjct: 110 KESIVDIEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F     TV+  F           LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++ H V E +  ++F +  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|119632023|gb|EAX11618.1| aspartyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
 gi|119632024|gb|EAX11619.1| aspartyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
          Length = 468

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL +      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 17  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 76

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL +           
Sbjct: 77  KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 134

Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 135 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 194

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 195 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 252

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F     TV+  F           LR
Sbjct: 253 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 312

Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++ H V E +  ++F +  K  L+V P Y
Sbjct: 313 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 369



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 383 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 438

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 439 GLERVTMLFLGLHNVRQTSMFP 460


>gi|154686483|ref|YP_001421644.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166231657|sp|A7Z5Y7|SYN_BACA2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|154352334|gb|ABS74413.1| AsnS [Bacillus amyloliquefaciens FZB42]
          Length = 430

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 122/285 (42%), Gaps = 31/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
            G  V +  WV   R  G I FL +RD  G  Q   V A  +   F+IAKSV  E  L +
Sbjct: 12  TGEEVMIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEEDIFQIAKSVTQETSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V       +         EL+   IE++  A + P+     +E+       +R L L
Sbjct: 72  KGIVKEDERSPLG-------YELAVTSIEVIHEATDYPI---TPKEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +       E F++   PILT S+PEG  +       ++ +F  
Sbjct: 122 RSKRQHAIMKIRNEIIRATYEFFNKEGFVKVDPPILTGSAPEGTTELFATKYFDEDAF-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L   
Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFEENLEVQ 238

Query: 254 EN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
           EN    +++ V E           + S    +   F RI YD AI
Sbjct: 239 ENYVAYIVQSVLEHCKIELNTLGRDTSKLEQIKAPFPRITYDKAI 283



 Score = 37.7 bits (86), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 9/117 (7%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC-NGF-EIASGGIRNHMSEVMLQ 506
           +K +   H P ++    M+  K  D + + A   DL+   G+ EI  G  R H  +++ +
Sbjct: 313 DKPVFITHYPTSLKPFYMQPAKDRDDVVLCA---DLIAPEGYGEIIGGSERVHDMDLLEE 369

Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                G+  +     +       Q G  PH G   G++R V  + GA +VRE   FP
Sbjct: 370 RLKEHGLDSDA----YKWYAELRQYGSVPHSGFGLGLERTVAWISGAPHVRETIPFP 422


>gi|315426572|dbj|BAJ48202.1| aspartyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 440

 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 141/312 (45%), Gaps = 35/312 (11%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSV 65
            GD+     G  V L GWVH +R  G ++F+ +RD  GI QVV      + +  +  K +
Sbjct: 16  AGDVKPELDGRVVNLFGWVHEIRDLGKLVFILLRDVSGICQVVFRMEEVEQSVRDAVKGL 75

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +E  + ++G+V+ +    +   ++  ++ +  + +  L +     +P           R
Sbjct: 76  TNESAVFVEGVVVKQPRSKLGVEVVGKRLTVLGRAVPKLELDPTGKVPA------GLDAR 129

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            ++R LDLRR  +    +  + ++ +MR     + F+E  TP L  S+ EG  +      
Sbjct: 130 LRHRILDLRRPEVRAVFLVGSEVLKAMRDFFHMKGFVEVRTPKLIGSATEGGAELFEVKY 189

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ ++ A  Q+PQ YK+ L  + F++  +I P FR E   + R   EF  +D+E SF +
Sbjct: 190 FDRVAYLA--QSPQLYKEQL-TTVFEKVCEIGPYFRAEASHTGRHISEFTSVDIEQSFAD 246

Query: 246 QDDILNTMENVLRGVFEEF------------SNGNTVSNNFLRICYDDAIR--------- 284
             ++++ +E ++  V +               N      +F R  YD+A+          
Sbjct: 247 MYEVMDVLEELVVHVHKHLVENHQHLLQMLGVNLRVPKRHFKRFTYDEALEILRSEGVEM 306

Query: 285 RYGTD--KPDLR 294
           R+G D   P LR
Sbjct: 307 RWGEDFGTPHLR 318



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E+ASGG R    +V+ +     G++  + E+      + F  GMP H G   
Sbjct: 355 FDLMYQWLELASGGTRVSDHDVLERKLREKGLNPAMFEDHL----KVFSYGMPVHAGWGL 410

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R +M+L    N+RE  LFP
Sbjct: 411 GFERFLMVLTRRTNIRETVLFP 432


>gi|148707802|gb|EDL39749.1| aspartyl-tRNA synthetase [Mus musculus]
          Length = 574

 Score =  101 bits (251), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 162/357 (45%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL V      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 123 DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 182

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL         V GE
Sbjct: 183 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 240

Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            +   ++    R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 241 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 300

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 301 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 358

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +T+  + +G+ E F     TVS  F           LR
Sbjct: 359 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 418

Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++  + +    ++F V  K  L+V P Y
Sbjct: 419 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 475



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 489 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 544

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 545 GLERVTMLFLGLHNVRQTSMFP 566


>gi|59803475|gb|AAX07827.1| cell proliferation-inducing protein 40 [Homo sapiens]
          Length = 501

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 162/358 (45%), Gaps = 49/358 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL +      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL +           
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +TM ++ +G+ E F     TV+  F           LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVHIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++ H V E +  ++F +  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|229059887|ref|ZP_04197262.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228719432|gb|EEL71035.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 437

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C + G    G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 10  MKRSLTRECTEHG----GKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 65

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ I G ++      +        +E+ A ++++L+ AE LP  +  ++ +
Sbjct: 66  ----VDVESVVQIIGEIVETPKTELG-------VEILAHEVKVLNGAESLPFEINKKKLQ 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 115 VGLDQLLNERVLSLRHERIAAIFKVKSTLVQSFSEFLIENDFTRVFTPKIVSQGAEGGAN 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 175 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 232

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 233 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 271



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 24/131 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I  +P             A   +TMP    E++  +         +DL+  G EI 
Sbjct: 323 EFVFITHYP-----------KEARPMYTMPNKENEAITDS---------FDLLYKGLEIT 362

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  E++L +F   G+  E    +F      F+ G PPHGG   G++R+V  LL 
Sbjct: 363 SGAQRIHNHEMLLASFKEKGLHPE----KFQSYLDTFRYGCPPHGGFGIGLERVVYRLLE 418

Query: 553 AKNVREVSLFP 563
             NVRE S FP
Sbjct: 419 LSNVREASAFP 429


>gi|30584115|gb|AAP36306.1| Homo sapiens aspartyl-tRNA synthetase [synthetic construct]
 gi|61372030|gb|AAX43774.1| aspartyl-tRNA synthetase [synthetic construct]
 gi|61372037|gb|AAX43775.1| aspartyl-tRNA synthetase [synthetic construct]
          Length = 502

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL +      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL +           
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F     TV+  F           LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++ H V E +  ++F +  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|300118068|ref|ZP_07055816.1| aspartyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|298724379|gb|EFI65073.1| aspartyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 432

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C +      G  V L GWV ++R  G + FL +RD  G+ Q V   + A F+
Sbjct: 5   MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++ +
Sbjct: 61  ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I  +P             A   +TMP     S+  +         +DL+  G EI 
Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENSSITDS---------FDLLYKGLEIT 357

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  E++L +F   G+      ++F      F+ G PPHGG   G++RIV  LL 
Sbjct: 358 SGAQRIHNYEMLLDSFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413

Query: 553 AKNVREVSLFP 563
             NVRE S FP
Sbjct: 414 LSNVREASAFP 424


>gi|26346400|dbj|BAC36851.1| unnamed protein product [Mus musculus]
          Length = 501

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 162/357 (45%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL V      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 50  DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL         V GE
Sbjct: 110 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167

Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            +   ++    R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +T+  + +G+ E F     TVS  F           LR
Sbjct: 286 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFKTEIQTVSKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++  + +    ++F V  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|196039816|ref|ZP_03107120.1| aspartate--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029519|gb|EDX68122.1| aspartate--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 432

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C +      G  V L GWV ++R  G + FL +RD  G+ Q V   + A F+
Sbjct: 5   MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVMQCVLENEFAGFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++ +
Sbjct: 61  ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLGQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I  +P             A   +TMP     S+  +         +DL+  G EI 
Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENSSITDS---------FDLLYKGLEIT 357

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  E++L +F   G+      ++F      F+ G PPHGG   G++RIV  LL 
Sbjct: 358 SGAQRIHNYEMLLDSFKGKGLHP----DKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413

Query: 553 AKNVREVSLFP 563
             NVRE S FP
Sbjct: 414 LSNVREASAFP 424


>gi|110800091|ref|YP_695221.1| aspartyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|110674738|gb|ABG83725.1| aspartyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 429

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 120/242 (49%), Gaps = 15/242 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           + GW++++R    I F+ IRD  G+ Q VA  +        ++  E V+ I+G  +  S 
Sbjct: 19  IKGWIYKIRRLKFITFIIIRDRSGLVQCVAENEKLDL---SNLTVESVVSIEG-ALKESK 74

Query: 83  ETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFKYRFLDLRRDTLHK 140
            ++N+       E+  + IEI++ A EEL + V  E  +         R L LR   ++ 
Sbjct: 75  NSLNS------FEIQVENIEIINKAKEELKIEVNKETLDINLDTMLNNRMLSLRHKKINA 128

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
               +  I +S R  +  E F E  TP +     EG  +          ++  L Q+PQ 
Sbjct: 129 IFKVQNIITDSFREFLNKEGFTEIHTPKIVKEGAEGGTEVFEVKYFENKAY--LAQSPQF 186

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRG 259
           YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+EM F+E + DI+N  EN+L+ 
Sbjct: 187 YKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYVSMDLEMGFIENEFDIMNLEENLLKF 246

Query: 260 VF 261
           + 
Sbjct: 247 IL 248



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 15/103 (14%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +TMP+G     KG          +DL+  G EI +GG R H  E++++     G++    
Sbjct: 332 YTMPKGE----KG-------THSFDLLFRGIEITTGGQRIHDYEMLVENMKYKGLNP--- 377

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
            N +      F+ GMP HGG+A G++RI   +LG +NVRE +L
Sbjct: 378 -NSYESYLELFKLGMPKHGGLAIGLERITARILGLENVREATL 419


>gi|21264011|sp|Q922B2|SYDC_MOUSE RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|14250408|gb|AAH08638.1| Aspartyl-tRNA synthetase [Mus musculus]
          Length = 501

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 162/357 (45%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL V      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 50  DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL         V GE
Sbjct: 110 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167

Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            +   ++    R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +T+  + +G+ E F     TVS  F           LR
Sbjct: 286 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++  + +    ++F V  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|74226918|dbj|BAE27102.1| unnamed protein product [Mus musculus]
          Length = 501

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 162/357 (45%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL V      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 50  DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQRFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL         V GE
Sbjct: 110 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167

Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            +   ++    R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +T+  + +G+ E F     TVS  F           LR
Sbjct: 286 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++  + +    ++F V  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|211065507|ref|NP_803228.2| aspartyl-tRNA synthetase, cytoplasmic isoform 1 [Mus musculus]
 gi|74142156|dbj|BAE31847.1| unnamed protein product [Mus musculus]
 gi|74142233|dbj|BAE31881.1| unnamed protein product [Mus musculus]
 gi|74146640|dbj|BAE41327.1| unnamed protein product [Mus musculus]
 gi|74181559|dbj|BAE30045.1| unnamed protein product [Mus musculus]
 gi|74207176|dbj|BAE30780.1| unnamed protein product [Mus musculus]
 gi|74214523|dbj|BAE31110.1| unnamed protein product [Mus musculus]
 gi|74220274|dbj|BAE31315.1| unnamed protein product [Mus musculus]
          Length = 501

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 162/357 (45%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL V      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 50  DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL         V GE
Sbjct: 110 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167

Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            +   ++    R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +T+  + +G+ E F     TVS  F           LR
Sbjct: 286 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++  + +    ++F V  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|228914794|ref|ZP_04078403.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|301053717|ref|YP_003791928.1| aspartyl-tRNA synthetase [Bacillus anthracis CI]
 gi|228845113|gb|EEM90155.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|300375886|gb|ADK04790.1| aspartyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 432

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C +      G  V L GWV ++R  G + FL +RD  G+ Q V   + A F+
Sbjct: 5   MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++ +
Sbjct: 61  ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLGQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV  LL   NVRE S FP
Sbjct: 403 GLERIVYKLLELSNVREASAFP 424


>gi|62896511|dbj|BAD96196.1| aspartyl-tRNA synthetase variant [Homo sapiens]
          Length = 501

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL +      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL +           
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F     TV+  F           LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++ H V E +  ++F +  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|254519491|ref|ZP_05131547.1| aspartyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226913240|gb|EEH98441.1| aspartyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 428

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 128/245 (52%), Gaps = 16/245 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++ GW++RVR    I FL IRD  G+ Q V   ++       S++ E V+ I G+V  +
Sbjct: 17  IKIEGWLYRVRRLKSITFLLIRDRSGLVQCVIENNNIDL---SSLKLESVVSIVGIV-KK 72

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR--FKYRFLDLRRDTL 138
           S  ++N        E+  +  EI+S A ELP+ +  ++E   ++      R + +R + +
Sbjct: 73  SNNSLNP------FEILVESFEIISEAHELPIEL-NKKELDVNLDTILNNRAISIRHEKV 125

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
           +     +  I+ S R  +I + F E  TP + A   EG  +        + ++ A  Q+P
Sbjct: 126 NSIFKIQNIIVQSFREFLINKGFTEIFTPKIVAEGAEGGTEVFKVEYFEKTAYLA--QSP 183

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVL 257
           Q YKQ+++ +GF+R F++A  +R E   + R   E+  +D+E+ F+  + DI+N  E+++
Sbjct: 184 QFYKQMMVGAGFERVFEVAHVYRAEQHNTSRHLNEYISMDLEIGFINDEFDIMNLEEDLI 243

Query: 258 RGVFE 262
           + + +
Sbjct: 244 KFILK 248



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI +GG R +   +++++  N G++ +  E+        F+ GMP HGG+A 
Sbjct: 343 FDLLFKGVEITTGGQRINDYNMLIKSIENKGLNPKDYES----YTDIFRYGMPKHGGLAI 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RI   LL  +NVRE SL P
Sbjct: 399 GLERITTQLLNLENVREASLIP 420


>gi|229096717|ref|ZP_04227688.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228686923|gb|EEL40830.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 432

 Score =  100 bits (250), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 15/265 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M +  T S        VG  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 1   MDQIMTRSLAQACTEHVGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ I G ++  S   +        +E+ A ++++L+ AE+LP  +  ++ +
Sbjct: 61  ----VDVESVVQIVGEIVETSKTELG-------VEVLAHEVKVLNGAEQLPFELNKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        +  +  S    +   +FI   TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKATLAQSFSDYLAENDFIRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEE 263
           E+ F++   +++    +VLR +F++
Sbjct: 228 ELGFIDDFHEVMQLETDVLRHMFQQ 252



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  +++L +F   G+  E    +F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYDLLLASFKEKGLHLE----KFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV  LL   NVRE S FP
Sbjct: 403 GLERIVYKLLELTNVREASAFP 424


>gi|45439306|ref|NP_001340.2| aspartyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|20178330|sp|P14868|SYDC_HUMAN RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; AltName:
           Full=Cell proliferation-inducing gene 40 protein
 gi|12653689|gb|AAH00629.1| Aspartyl-tRNA synthetase [Homo sapiens]
 gi|30582259|gb|AAP35356.1| aspartyl-tRNA synthetase [Homo sapiens]
 gi|60655171|gb|AAX32149.1| aspartyl-tRNA synthetase [synthetic construct]
 gi|60655173|gb|AAX32150.1| aspartyl-tRNA synthetase [synthetic construct]
 gi|119632022|gb|EAX11617.1| aspartyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|119632025|gb|EAX11620.1| aspartyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|123979676|gb|ABM81667.1| aspartyl-tRNA synthetase [synthetic construct]
 gi|123994473|gb|ABM84838.1| aspartyl-tRNA synthetase [synthetic construct]
 gi|158254646|dbj|BAF83296.1| unnamed protein product [Homo sapiens]
          Length = 501

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL +      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL +           
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F     TV+  F           LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++ H V E +  ++F +  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|229102819|ref|ZP_04233515.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228680604|gb|EEL34785.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 432

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 15/265 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M +  T S        VG  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 1   MDQIMTRSLAQACTEHVGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ I G ++  S   +        +E+ A ++++L+ AE+LP  +  ++ +
Sbjct: 61  ----VDVESVVQIVGEIVETSKTELG-------VEVLAHEVKVLNGAEQLPFELNKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        +  +  S    +   +FI   TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKATLAQSFSDYLTENDFIRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEE 263
           E+ F++   +++    +VLR +F++
Sbjct: 228 ELGFIDDFHEVMQLETDVLRYMFQQ 252



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  +++L +F   G+  E    +F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYDLLLASFKEKGLHLE----KFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V  LL   NVRE S FP
Sbjct: 403 GLERVVYKLLELTNVREASAFP 424


>gi|78394948|gb|AAI07750.1| Aspartyl-tRNA synthetase [Homo sapiens]
          Length = 501

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL +      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL +           
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F     TV+  F           LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++ H V E +  ++F +  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|291484658|dbj|BAI85733.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 431

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 122/285 (42%), Gaps = 31/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  WV   R  G I FL +RD  G  Q   V A  + + F+ AKSV  E  L I
Sbjct: 13  VGEEVTIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEESIFQTAKSVTQETSLYI 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V       +         EL+   IE++  A + P+     +E+       +R L L
Sbjct: 73  KGIVKEDERSPLG-------YELAVTDIEVIHEATDYPI---TPKEHGTEFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +       E F++   PILT S+PEG  +       ++ ++  
Sbjct: 123 RSKRQHAIMKIRNEIIRATYEFFNNEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L   
Sbjct: 181 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFEENLQVQ 239

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283
           EN +  + +               + S    +   F RI YD+AI
Sbjct: 240 ENYVSFIVQSVLKNCKIELNTLGRDTSKLEQIKAPFPRITYDEAI 284


>gi|228927265|ref|ZP_04090327.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228832412|gb|EEM77987.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 432

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C +      G  V L GWV ++R  G + FL +RD  G+ Q V   + A F+
Sbjct: 5   MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++ +
Sbjct: 61  ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I  +P             A   +TMP     S+  +         +DL+  G EI 
Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENSSITDS---------FDLLYKGLEIT 357

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  E++L +F   G+      ++F      F+ G PPHGG   G++RIV  LL 
Sbjct: 358 SGAQRIHNYEMLLDSFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413

Query: 553 AKNVREVSLFP 563
             NVRE S FP
Sbjct: 414 LSNVREASAFP 424


>gi|196034019|ref|ZP_03101430.1| aspartyl-tRNA synthetase [Bacillus cereus W]
 gi|228945810|ref|ZP_04108156.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|195993699|gb|EDX57656.1| aspartyl-tRNA synthetase [Bacillus cereus W]
 gi|228813875|gb|EEM60150.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 432

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C +      G  V L GWV ++R  G + FL +RD  G+ Q V   + A F+
Sbjct: 5   MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++ +
Sbjct: 61  ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 24/131 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I+ +P             A   +TMP     S+  +         +DL+  G EI 
Sbjct: 318 EFVFIIHYP-----------KEARPMYTMPNNENSSITDS---------FDLLYKGLEIT 357

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  E++L +F   G+      ++F      F+ G PPHGG   G++RIV  LL 
Sbjct: 358 SGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413

Query: 553 AKNVREVSLFP 563
             NVRE S FP
Sbjct: 414 LSNVREASAFP 424


>gi|30262201|ref|NP_844578.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47527478|ref|YP_018827.1| aspartyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185042|ref|YP_028294.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|165872218|ref|ZP_02216856.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167641071|ref|ZP_02399327.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170686496|ref|ZP_02877717.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170708425|ref|ZP_02898868.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177650759|ref|ZP_02933656.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190567860|ref|ZP_03020771.1| aspartyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227814999|ref|YP_002815008.1| aspartyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229601858|ref|YP_002866551.1| aspartate--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254684769|ref|ZP_05148629.1| aspartyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254721062|ref|ZP_05182853.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254737216|ref|ZP_05194920.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254751531|ref|ZP_05203568.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254759046|ref|ZP_05211073.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|30256832|gb|AAP26064.1| aspartate--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47502626|gb|AAT31302.1| aspartyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49178969|gb|AAT54345.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164712011|gb|EDR17550.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510969|gb|EDR86359.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170126664|gb|EDS95548.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170669572|gb|EDT20314.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172083220|gb|EDT68281.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190560915|gb|EDV14889.1| aspartyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227004153|gb|ACP13896.1| aspartate--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229266266|gb|ACQ47903.1| aspartate--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 432

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C +      G  V L GWV ++R  G + FL +RD  G+ Q V   + A F+
Sbjct: 5   MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++ +
Sbjct: 61  ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLDSFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV  LL   NVRE S FP
Sbjct: 403 GLERIVYKLLELSNVREASAFP 424


>gi|229017507|ref|ZP_04174408.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|228743831|gb|EEL93932.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 437

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 19/268 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C +      G  V L GWV +VR  G + FL +RD  G+ Q V   + A ++
Sbjct: 10  MKRSLTKECKE----QSGKVVLLQGWVKKVRHLGNVSFLLLRDRTGVIQCVLENELAGYK 65

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ I G ++  S   +        +E+ A +++IL+ AE LP  +  ++ +
Sbjct: 66  ----VDVESVVQIVGQIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 115 VGLDQLLNERVLSLRHERIAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++  L Q+PQ YKQ+++A G +R F++AP +R E   S R   E+  LD+
Sbjct: 175 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEVAPVYRAEHHNSSRHLNEYISLDV 232

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSN 266
           E+ F+    +++    +VLR +F++ + 
Sbjct: 233 ELGFIHDFYEVMQLETDVLRYMFQQVAK 260



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 63/141 (44%), Gaps = 27/141 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I  +P             A   +TMP    E++  +         +DL+  G EI 
Sbjct: 323 EFVFITHYP-----------KEARPMYTMPNKENEAVTDS---------FDLLYKGLEIT 362

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  E++L +F   G+  E    +F      F+ G PPHGG   G++R+V  LL 
Sbjct: 363 SGAQRIHNHEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGIGLERVVYKLLE 418

Query: 553 AKNVREVSLFPMSQNFCDLLM 573
             NVRE S FP     C  LM
Sbjct: 419 LTNVREASAFPRD---CTRLM 436


>gi|229091180|ref|ZP_04222403.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228692311|gb|EEL46047.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 432

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C +      G  V L GWV ++R  G + FL +RD  G+ Q V   + A F+
Sbjct: 5   MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++ +
Sbjct: 61  ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTMAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I  +P             A   +TMP     S+  +         +DL+  G EI 
Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENSSITDS---------FDLLYKGLEIT 357

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  E++L +F   G+      ++F      F+ G PPHGG   G++RIV  LL 
Sbjct: 358 SGAQRIHNYEMLLDSFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413

Query: 553 AKNVREVSLFP 563
             NVRE S FP
Sbjct: 414 LSNVREASAFP 424


>gi|16079293|ref|NP_390117.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310152|ref|ZP_03591999.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221314474|ref|ZP_03596279.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221319396|ref|ZP_03600690.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221323672|ref|ZP_03604966.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|321311705|ref|YP_004203992.1| asparaginyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|1711642|sp|P39772|SYN_BACSU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|1146247|gb|AAB38455.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|2634654|emb|CAB14152.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|320017979|gb|ADV92965.1| asparaginyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 430

 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 122/285 (42%), Gaps = 31/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  WV   R  G I FL +RD  G  Q   V A  + + F+ AKSV  E  L I
Sbjct: 12  VGEEVTIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEESIFQTAKSVTQETSLYI 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V       +         EL+   IE++  A + P+     +E+       +R L L
Sbjct: 72  KGIVKEDERSPLG-------YELAVTDIEVIHEATDYPI---TPKEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +       E F++   PILT S+PEG  +       ++ ++  
Sbjct: 122 RSKRQHAIMKIRNEIIRATYEFFNNEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L   
Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFEENLQVQ 238

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283
           EN +  + +               + S    +   F RI YD+AI
Sbjct: 239 ENYVSFIVQSVLKNCKIELNTLGRDTSKLEQIKAPFPRITYDEAI 283


>gi|308174027|ref|YP_003920732.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307606891|emb|CBI43262.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328552847|gb|AEB23339.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328912355|gb|AEB63951.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 430

 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 120/285 (42%), Gaps = 31/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
            G  V +  WV   R  G I FL +RD  G  Q   V A  +   F+IAKSV  E  L +
Sbjct: 12  TGEEVTIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEENIFQIAKSVTQETSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V       +         EL+   IE++  A + P+     +E+       +R L L
Sbjct: 72  KGIVKEDERSPLG-------YELAVTSIEVIHEATDYPI---TPKEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +       E F++   PILT S+PEG  +       ++ +F  
Sbjct: 122 RSKRQHAIMKIRNEIIRATYEFFNKEGFVKVDPPILTGSAPEGTTELFATKYFDEDAF-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L   
Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFEENLEVQ 238

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283
           EN +  + +               + S    +   F RI YD AI
Sbjct: 239 ENYVAYIVQSVLKNCKIELNTLGRDTSKLEQIKAPFPRITYDKAI 283



 Score = 37.7 bits (86), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 9/117 (7%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC-NGF-EIASGGIRNHMSEVMLQ 506
           +K +   H P ++    M+  K  D + + A   DL+   G+ EI  G  R H  +++ +
Sbjct: 313 DKPVFITHYPTSLKPFYMQPAKDRDDVVLCA---DLIAPEGYGEIIGGSERVHDMDLLEE 369

Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                G+  +     +       Q G  PH G   G++R V  + GA +VRE   FP
Sbjct: 370 RLKEHGLDSDA----YKWYAELRQYGSVPHSGFGLGLERTVAWISGAPHVRETIPFP 422


>gi|225864167|ref|YP_002749545.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|225786637|gb|ACO26854.1| aspartate--tRNA ligase [Bacillus cereus 03BB102]
          Length = 432

 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C +      G  V L GWV ++R  G + FL +RD  G+ Q V   + A F+
Sbjct: 5   MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++ +
Sbjct: 61  ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I  +P             A   +TMP     S+  +         +DL+  G EI 
Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENSSITDS---------FDLLYKGLEIT 357

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  E++L +F   G+      ++F      F+ G PPHGG   G++RIV  LL 
Sbjct: 358 SGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413

Query: 553 AKNVREVSLFP 563
             NVRE S FP
Sbjct: 414 LSNVREASAFP 424


>gi|296333026|ref|ZP_06875483.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305674870|ref|YP_003866542.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296149877|gb|EFG90769.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305413114|gb|ADM38233.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 430

 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 122/285 (42%), Gaps = 31/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  WV   R  G I FL +RD  G  Q   V A  + + F+ AKSV  E  L I
Sbjct: 12  VGEEVMIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEESIFQTAKSVTQETSLYI 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V       +         EL+   IE++  A + P+     +E+       +R L L
Sbjct: 72  KGIVKEDERSPLG-------YELAVTGIEVIHEATDYPIT---PKEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +       E F++   PILT S+PEG  +       ++ ++  
Sbjct: 122 RSKRQHAIMKIRNEIIRATYEFFNNEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L   
Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFEENLQVQ 238

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283
           EN +  + +               + S    +   F RI YD+AI
Sbjct: 239 ENYVSFIVQSVLKNCKIELNTLGRDTSKLEQIKAPFPRITYDEAI 283


>gi|229011492|ref|ZP_04168680.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228749783|gb|EEL99620.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 437

 Score =  100 bits (249), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 132/279 (47%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C + G    G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 10  MKRSLTRECTEHG----GKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 65

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ I G ++      +        +E+ A+++++L+ AE LP  +  ++ +
Sbjct: 66  ----VDVESVVQIIGEIVETPKTELG-------VEVLAREVKVLNGAEPLPFEINKKKLQ 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 115 VGLDQLLNERVLSLRHERIAAVFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 175 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 232

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 233 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 271



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  +++L +F   G+  E    +F      F+ G PPHGG   
Sbjct: 352 FDLLYKGLEITSGAQRIHNYDMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 407

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V  LL   NVRE S FP
Sbjct: 408 GLERVVYKLLELTNVREASAFP 429


>gi|224550149|gb|ACN54159.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Nasonia
           giraulti]
 gi|224550151|gb|ACN54160.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Nasonia
           longicornis]
 gi|224550153|gb|ACN54161.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Nasonia
           longicornis]
          Length = 151

 Score =  100 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 64/158 (40%), Positives = 93/158 (58%), Gaps = 9/158 (5%)

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+DI   +E+ L  VF +FS   +V  +F RI Y DA+ +YG+DKPDLRNP+++ 
Sbjct: 1   MSFVTQEDIFQVIESTLYKVFAKFSR-KSVDKDFPRITYKDAMLKYGSDKPDLRNPLLIS 59

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQ-GQPGLAY 358
           +VTE F +SEF +F    ++  G  V AIPA K     R+F D+  E A+ + G  GL Y
Sbjct: 60  DVTEIFRNSEFNIFKS--NIERGMVVRAIPAPKTAEEPRSFFDKKIEHAQKELGAKGLGY 117

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
           I    D+ G     GP+AK L+     +I+   +++ G
Sbjct: 118 I--TFDKDG--IAKGPIAKFLDDNRLNSIKEITNVKPG 151


>gi|218903321|ref|YP_002451155.1| aspartyl-tRNA synthetase [Bacillus cereus AH820]
 gi|218538197|gb|ACK90595.1| aspartyl-tRNA synthetase [Bacillus cereus AH820]
          Length = 432

 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C +      G  V L GWV ++R  G + FL +RD  G+ Q V   + A F+
Sbjct: 5   MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++ +
Sbjct: 61  ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I  +P             A   +TMP     S+  +         +DL+  G EI 
Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENSSITDS---------FDLLYKGLEIT 357

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  E++L +F      K +  ++F      F+ G PPHGG   G++RIV  LL 
Sbjct: 358 SGAQRIHNYEMLLDSFKE----KRLHPDKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413

Query: 553 AKNVREVSLFP 563
             NVRE S FP
Sbjct: 414 LSNVREASAFP 424


>gi|126326269|ref|XP_001370366.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 499

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 162/357 (45%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL V      V +   +H  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 48  DLTVQKADDVVWVRARIHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 107

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117
            E ++ ++G+V  R       +     +EL  Q+I ++S+AE  LPL         V GE
Sbjct: 108 KESIVDVEGVV--RKVNQKIGSCSQQDVELHVQRIYVISLAEPRLPLQLDDAIRPEVEGE 165

Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            E   ++    R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 166 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLIHKGFVEIQTPKIISAA 225

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 226 SEGGANVFTVSYFKSNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 283

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        D+I +T+  + +G+ E F     TV+  F           LR
Sbjct: 284 FVGLDIEMAFNYHYHEVIDEIADTLVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 343

Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++  + +    ++F +  K  L+V P Y
Sbjct: 344 LEYREALALLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 400



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 414 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 469

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 470 GLERVTMLYLGLHNVRQTSMFP 491


>gi|313680121|ref|YP_004057860.1| aspartate--tRNA(asn) ligase [Oceanithermus profundus DSM 14977]
 gi|313152836|gb|ADR36687.1| aspartate--tRNA(Asn) ligase [Oceanithermus profundus DSM 14977]
          Length = 424

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 128/255 (50%), Gaps = 23/255 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V L GW+H  R  GGI F+ +RD  GI QVV  P      + +S      + + G+
Sbjct: 13  VGEEVELQGWLHWRRNLGGIQFILLRDRSGIVQVVL-PGGLKLPLPESA-----VRVRGV 66

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY----PESIRFKYRFLD 132
           V       +  +   G  E+ A+ +E+L  +++ P PV   +E     PE++   YR++ 
Sbjct: 67  V-------VQNDKAPGGYEVQAEDLEVLQPSQQ-PTPVEIPKEEWRANPETL-LTYRYVT 117

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +     +  ++ ++   R  + ++ F E  TP L  +  EG  +        + ++ 
Sbjct: 118 LRGEKARAPLKIQSALVRGFRKYLDSQGFTEIFTPKLVRAGAEGGANLFEVDYFGESAYL 177

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILN 251
           A  Q+PQ YKQ+ M   ++R +++AP +R E+  + R   E+  LD+EM F++ D D++ 
Sbjct: 178 A--QSPQLYKQI-MVGVYERVYEVAPVWRAEEHATSRHLNEYLSLDVEMGFIDSDEDVMA 234

Query: 252 TMENVLRGVFEEFSN 266
             E ++R + EE + 
Sbjct: 235 LEEELVRAMLEETAQ 249



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+  G EI SGG R H  +V++Q     G+  +    RF      F+ GMPPHGG A 
Sbjct: 339 YDLLFRGLEITSGGQRIHDPDVIVQQLEKKGMDPQ----RFRDYIEVFKYGMPPHGGFAI 394

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R    L+G  NVR    FP  ++
Sbjct: 395 GAERFTQKLIGLPNVRYARAFPRDRH 420


>gi|171186429|ref|YP_001795348.1| aspartyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170935641|gb|ACB40902.1| aspartyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 429

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 139/301 (46%), Gaps = 28/301 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+  +TH   ++     G  V L GWV  +R  G + F+ +RD  G  Q+         +
Sbjct: 1   MYPRKTHWTSEITPELHGKEVVLGGWVWELRDLGKVKFIVLRDREGFVQLTLKAGKTPEQ 60

Query: 61  IAK---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           + K    +  E V+ + G+V +       + I    +E+    + +L+ A+ LPL ++ +
Sbjct: 61  VLKLFSELNREDVIVVRGVVEA-------SKIAKRGVEVFPTDLWVLNKAKPLPLDIWSD 113

Query: 118 REYPE-SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
              P+ + R ++R +DL+R          + ++  +R  +  E F+E  TP +  +S EG
Sbjct: 114 T--PDLATRLRWRSVDLKRPRNLAVFTLSSEVLKEIRQVLYGERFVEVFTPKIIVTSTEG 171

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             + L P    +   Y L Q+PQ YK+ L AS  +R F+I P +R E   +D    EF  
Sbjct: 172 GAE-LFPVLYFERVAY-LSQSPQLYKEQLTAS-LERVFEIGPAYRAEKHNTDYHLNEFIS 228

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAIR 284
           +D E +F+   D+++ +E + R VF   S               +  +   R+ YD+A+ 
Sbjct: 229 VDAEAAFMSYQDVMDVLEKITRRVFTAVSKHEAKLKEVGITPIASEISEVPRVDYDEAVD 288

Query: 285 R 285
           R
Sbjct: 289 R 289



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K+  YDL+ NG E+ASG  R H  + + +     G+  ++ E+        F  GMPPH 
Sbjct: 340 KSESYDLIINGIEVASGATRIHRRDELEEEMRKRGLDPKLFESHLA----VFDYGMPPHA 395

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G +R++  +L   NVR   L+P
Sbjct: 396 GFGLGFNRLITAVLNLDNVRHAVLYP 421


>gi|168209272|ref|ZP_02634897.1| aspartyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170712713|gb|EDT24895.1| aspartyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 429

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 119/242 (49%), Gaps = 15/242 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           + GWV+++R    I F+ IRD  G+ Q  A  + +      ++  E V+ I+G  +  S 
Sbjct: 19  IKGWVYKIRRLKFITFIIIRDRSGLVQCAAENEKSDL---SNLTVESVVSIEG-TLKESK 74

Query: 83  ETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFKYRFLDLRRDTLHK 140
             +N+       E+  + IEI++ A EEL + V  E  +         R L LR   ++ 
Sbjct: 75  NLLNS------FEIQVENIEIINKAKEELKIEVNKETLDINLDTMLNNRMLSLRHKKINS 128

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
               +  I +S R  +  E F E  TP +     EG  +          ++  L Q+PQ 
Sbjct: 129 IFKVQNIITDSFREFLNKEGFTEIHTPKIVKEGAEGGTEVFEVKYFENKAY--LAQSPQF 186

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRG 259
           YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+EM F+E + DI+N  EN+L+ 
Sbjct: 187 YKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYVSMDLEMGFIENEFDIMNLEENLLKF 246

Query: 260 VF 261
           + 
Sbjct: 247 IL 248



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 15/103 (14%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +TMP+G     KG          +DL+  G EI +GG R H  E++++     G++    
Sbjct: 332 YTMPKGE----KG-------THSFDLLFRGIEITTGGQRIHDYEMLVENMKYKGLNP--- 377

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
            N +      F+ GMP HGG+A G++RI   +LG +NVRE +L
Sbjct: 378 -NSYESYLELFKLGMPKHGGLAIGLERITARILGLENVREATL 419


>gi|291391498|ref|XP_002712168.1| PREDICTED: aspartyl-tRNA synthetase [Oryctolagus cuniculus]
          Length = 501

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 162/357 (45%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL V      V + G VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 50  DLTVQKADEVVWVRGRVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL         + GE
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEIEGE 167

Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            E   ++    R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +T+  + +G+ E F      V+  F           LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTLVQIFKGLQERFQTEIQMVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++  + +    ++F +  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|74139282|dbj|BAE38517.1| unnamed protein product [Mus musculus]
          Length = 501

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 160/357 (44%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL V      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 50  DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL         V GE
Sbjct: 110 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167

Query: 118 RE----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            +      +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+   + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCFCADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +T+  + +G+ E F     TVS  F           LR
Sbjct: 286 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++  + +    ++F V  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|159898884|ref|YP_001545131.1| asparaginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|226695297|sp|A9AYM5|SYN_HERA2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|159891923|gb|ABX05003.1| asparaginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 447

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 128/287 (44%), Gaps = 30/287 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73
           VG  V+L+GWV+     G ++F+ +RD     Q V    N     F  AK +  E    I
Sbjct: 16  VGEAVKLAGWVYHKTEKGKLVFIQLRDGTATIQCVVFKKNVSEEVFARAKELTQESSCYI 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G + +    ++         EL    IEI+ + +  P+     +E+      ++R L +
Sbjct: 76  HGTLRADERSSLG-------FELDVTDIEIVHLTQNYPIT---PKEHGTQFLMEHRHLWV 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R ++I + +  + +E+F+   +PILTA++ EG  D       + G+ Y 
Sbjct: 126 RSAKQHALLRIRAQVIAAAQEYLNSEHFVRYDSPILTATAAEGTSDLFATEYFDLGNAY- 184

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +  MA+ F R +   P FR E  ++ R   EF+ ++ E +F +QDD +   
Sbjct: 185 LAQTGQLYVESGMAT-FGRVYCFGPTFRAEKSKTRRHLTEFWMIEPEFAFADQDDNMELQ 243

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRR 285
           EN +  + +               + S    +   F RI YD+AI +
Sbjct: 244 ENFVSYIVQRVLDRCEEDLKILERDTSKLENIVPPFPRISYDEAIEK 290


>gi|16758642|ref|NP_446251.1| aspartyl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
 gi|135099|sp|P15178|SYDC_RAT RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|203066|gb|AAA40789.1| aspartyl-tRNA synthetase [Rattus norvegicus]
 gi|1773257|gb|AAC52981.1| aspartyl-tRNA synthetase [Rattus norvegicus]
 gi|47938978|gb|AAH72534.1| Dars protein [Rattus norvegicus]
 gi|149058716|gb|EDM09873.1| rCG46287 [Rattus norvegicus]
 gi|161728829|dbj|BAF94235.1| aspartyl-tRNA synthetase [Rattus norvegicus]
 gi|161728850|dbj|BAF94255.1| aspartyl-tRNA synthetase [Rattus norvegicus]
          Length = 501

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 162/357 (45%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL V      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 50  DLTVQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL         V GE
Sbjct: 110 KESIIDVEGIV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167

Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            +   ++    R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EDGRATVNQDTRLDNRIIDLRTSTSQAIFHLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKSNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +T+  + +G+ E F     TV+  F           LR
Sbjct: 286 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++  + +    ++F V  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|296204889|ref|XP_002749521.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 1
           [Callithrix jacchus]
          Length = 501

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL V      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 50  DLTVQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114
            E ++ ++G+V  R       +     +EL  QK+ ++S+AE  LPL +           
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKVYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F     TV+  F           LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++ H V E +  ++F +  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|90077708|dbj|BAE88534.1| unnamed protein product [Macaca fascicularis]
          Length = 501

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL +      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL +           
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F     TV+  F           LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++ H V E +  ++F +  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|295101792|emb|CBK99337.1| Aspartyl/asparaginyl-tRNA synthetases [Faecalibacterium prausnitzii
           L2-6]
          Length = 444

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 126/255 (49%), Gaps = 20/255 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLC 72
            ++GS V++ G++  +R    + F+ ++D  G  Q+    +      +    +  + V+ 
Sbjct: 11  KEIGSTVKVQGFIENLRNSKYMAFIVLKDITGKLQITVEKEDHPELVDTIDKLTPDSVIT 70

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-----PVFGEREYPE--SI- 124
           + G VM       N  +  G IE+  + I I S+A+ LP+         +++  E  SI 
Sbjct: 71  VTGKVME------NDYVKMGGIEMIPEAIAIESIADALPIVRKEIAATKKKKAVERSSID 124

Query: 125 -RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  YR++DLR D        ++  +N+MR  ++  +FIE  TP L A++ E   +    
Sbjct: 125 QRIDYRWIDLRTDENQLMFKAQSCFVNAMRQFLLERSFIETHTPKLIAAASESGSEVFKV 184

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              ++ ++  L Q+PQ YKQ+ MA+GF+R F+  P FR E   +++   EF   D+E S+
Sbjct: 185 DYFDRNAY--LAQSPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHSTEFSGFDLEFSY 242

Query: 244 VEQ-DDILNTMENVL 257
           +    D++   E +L
Sbjct: 243 ITSYKDVMKMEEELL 257



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 5/71 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+  G EI +G  R H  +V+ +     G++ +V   +F      FQ G PPHGG   
Sbjct: 361 YDLIWRGVEITTGAQREHRYDVLKKQAEEKGLADDV---KF--YLEFFQYGCPPHGGFGL 415

Query: 542 GIDRIVMLLLG 552
           GIDR+ MLL G
Sbjct: 416 GIDRLTMLLCG 426


>gi|297566296|ref|YP_003685268.1| aspartyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296850745|gb|ADH63760.1| aspartyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 423

 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 124/251 (49%), Gaps = 21/251 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V L G++H  R  GGI F  +RD  GI QVV            S+R          
Sbjct: 13  VGEQVSLLGFLHWKRDLGGIQFALVRDRSGIVQVVVEKGVDLPLAESSIR---------- 62

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE--REYPESIRFKYRFLDL 133
           V  +  E   A    G  E+ A  IE++S A E  P+ +  E  R  PE++  +YR++ L
Sbjct: 63  VTGKVVENAKA---PGGYEVLANGIEVVSAALEPSPIEIPKEEWRVNPETL-LEYRYVSL 118

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +     +  +  ++   R  + A+ F E  TP + ++  EG  +        + ++  
Sbjct: 119 RGEKARAALQVQAALVRGFRNYLDAQGFTEIYTPKIVSAGAEGGSNLFGIDYFEKRAY-- 176

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNT 252
           L Q+PQ YKQ+ M   ++R +++AP FR E+  + R   E+  LD+EM F++ + ++++ 
Sbjct: 177 LAQSPQLYKQI-MVGVYERVYEVAPVFRAEEHATSRHLNEYLSLDVEMGFIQDEFEVIDL 235

Query: 253 MENVLRGVFEE 263
            EN+LR + EE
Sbjct: 236 EENLLRAMLEE 246



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SGG R H  EV+++   N G         F G    F+ GMPPHGG A 
Sbjct: 338 FDLLFRGLEITSGGQRVHQYEVLIEQLRNKGNDP----ANFAGYLEVFKYGMPPHGGFAI 393

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+   LLG  NVR    FP  ++
Sbjct: 394 GAERLTQKLLGLPNVRYARAFPRDRH 419


>gi|291296661|ref|YP_003508059.1| aspartyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290471620|gb|ADD29039.1| aspartyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 423

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 21/286 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            + VG  V L G++H  R  GGI F  +RD  GI QVV +     FE+  +  S      
Sbjct: 10  AAHVGQTVTLQGFLHWKRDLGGIQFALLRDRSGIVQVVVD---KRFELPLAESS------ 60

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEE---LPLPVFGEREYPESIRFKYRF 130
               M    E +      G  E+ AQ+IE  + A E   + +P    R  PE++  +YR+
Sbjct: 61  ----MRVVGEVVANAKAPGGYEVVAQEIEFYAKASEPSPIEIPKEEWRVNPETL-LEYRY 115

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           + LR +     +  +  ++   R  + ++ F E  TP + ++  EG  +          +
Sbjct: 116 VSLRGEKARAPLKIQAALVRGFRSYLDSQGFTEIFTPKIVSAGAEGGSNLFGIDYFEHRA 175

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDI 249
           +  L Q+PQ YKQ+ M   F+R +++AP FR E   + R   E+  LD+EM F+E + D+
Sbjct: 176 Y--LAQSPQLYKQI-MVGVFERVYEVAPVFRAEQHATSRHLNEYLSLDVEMGFIESEQDV 232

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           ++  E ++R + +E  +        L + + +       + P+ R 
Sbjct: 233 MDLEEELIRAMLDEARHTAAPECELLGVEWPNLAEMPRLEHPEARR 278



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 22/131 (16%)

Query: 445 WNEEEKKIDF--------AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           W +E+  +DF        +  PF     G  S +G          +DL+  G EI SGG 
Sbjct: 303 WAKEKWGVDFLFISKYPESARPFYAYPEGDGSTRG----------FDLLFRGLEITSGGQ 352

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  EV+++     G         F G    F+ GMPPHGG A G +R+   L+G  NV
Sbjct: 353 RIHQYEVLVEQLKKKGNDP----AHFAGYLEVFKYGMPPHGGFAIGAERLTQKLVGLPNV 408

Query: 557 REVSLFPMSQN 567
           R    FP  ++
Sbjct: 409 RYARAFPRDRH 419


>gi|228997302|ref|ZP_04156924.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229004927|ref|ZP_04162654.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228756275|gb|EEM05593.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228762394|gb|EEM11319.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 432

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 123/246 (50%), Gaps = 17/246 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L GWV ++R  G + FL +RD  G+ Q V   D A ++    V  E V+ I G ++  
Sbjct: 21  VLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLEKDLAGYK----VDVESVVQIIGELVET 76

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLDLRRDTL 138
           +   +        +EL  +++++L+ AE LP  V  +R+    +      R + LR + +
Sbjct: 77  TKTELG-------VELLVEEVKVLNTAEPLPFEV-NKRKLQVGLDQMLNERVISLRHERI 128

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                 ++ ++ +    +I  +F    TP + +   EG  +        + ++  L Q+P
Sbjct: 129 QAIFTIQSTLVQAFSEFLIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAY--LAQSP 186

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257
           Q YKQ+++A GF+  F+IAP +R E   S R   E+  LD+EM F+E   +++    +VL
Sbjct: 187 QFYKQMMVAGGFELVFEIAPVYRAEHHNSSRHLNEYISLDVEMGFIEDFYEVMALEADVL 246

Query: 258 RGVFEE 263
           R +FE+
Sbjct: 247 RYMFEQ 252



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H   ++L +F   G+  E     F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHEYRMLLASFKEKGLQPE----NFESYINTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V   L   NVRE S FP
Sbjct: 403 GLERLVYKFLELSNVREASAFP 424


>gi|229121752|ref|ZP_04250973.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228661668|gb|EEL17287.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus 95/8201]
          Length = 432

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C +      G  V L GWV ++R  G + FL +RD  G+ Q V   + A F+
Sbjct: 5   MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ A+ LP  +  ++ +
Sbjct: 61  ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGADPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 60/131 (45%), Gaps = 24/131 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I+ +P             A   +TMP         N+  S     +DL+  G EI 
Sbjct: 318 EFVFIIHYP-----------KEARPMYTMP---------NNENSAITDSFDLLYKGLEIT 357

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  E++L +F   G+      ++F      F+ G PPHGG   G++RIV  LL 
Sbjct: 358 SGAQRIHNYEMLLDSFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413

Query: 553 AKNVREVSLFP 563
             NVRE S FP
Sbjct: 414 LSNVREASAFP 424


>gi|49477543|ref|YP_036328.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|49329099|gb|AAT59745.1| aspartate--tRNA ligase (aspartyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 432

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 125/262 (47%), Gaps = 15/262 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V L GWV ++R  G + FL +RD  G+ Q V   + A F+    V  E ++ + G +
Sbjct: 18  GKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK----VDVESIVHVIGEI 73

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRD 136
           +  S   +        +E+ A +++IL+ AE LP  +  ++ +         R L LR +
Sbjct: 74  VETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQVGLDQLLNERVLSLRHE 126

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                   ++ ++ S    +I  +F    TP + +   EG  +        + ++ A  Q
Sbjct: 127 RTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAYLA--Q 184

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMEN 255
           +PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+E+ F+    +++    +
Sbjct: 185 SPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHEVMQLETD 244

Query: 256 VLRGVFEEFSNGNTVSNNFLRI 277
           VLR +F++ +         L+I
Sbjct: 245 VLRYMFQQVAKNCEKELQLLQI 266



 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I  +P             A   +TMP     S+  +         +DL+  G EI 
Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENSSITDS---------FDLLYKGLEIT 357

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  E++L +F   G+      ++F      F+ G PPHGG   G++RIV  LL 
Sbjct: 358 SGAQRIHNYEMLLDSFKGKGLHP----DKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413

Query: 553 AKNVREVSLFP 563
             NVRE S FP
Sbjct: 414 LSNVREASAFP 424


>gi|327310528|ref|YP_004337425.1| aspartyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947007|gb|AEA12113.1| aspartyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 431

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 130/261 (49%), Gaps = 18/261 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFE 60
           +TH   ++     G  V ++GWV  +R  G + F+ +RD  G  Q+       PD    +
Sbjct: 5   KTHFTSEITPELNGREVVVAGWVWEIRDLGRVKFVVLRDREGFVQLTFKAGRTPDDLLSK 64

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-GERE 119
           I + +  E V+ + G+V +       + I    +E+  Q++ +++ A  LP+ ++ G  +
Sbjct: 65  IPQ-LNKEDVVVVRGIVEA-------SKIAKSGVEVFPQEMWVVAKARPLPVDLWEGTSD 116

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            P   R KYR  DL+           + I+ ++R  +    F+E  TP + A+S EG  +
Sbjct: 117 LP--TRLKYRAADLKSPRNLAIFTTASEILKAVREVLYRHKFVEVFTPKIIATSTEGGAE 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YK+ L AS  +R F+IAP +R E   +D    EF  +D 
Sbjct: 175 LFAVLYFERVAYLA--QSPQLYKEQLTAS-LERVFEIAPAYRAEKHNTDYHLNEFISIDG 231

Query: 240 EMSFVEQDDILNTMENVLRGV 260
           E +F++ +DI++ +E ++R +
Sbjct: 232 EGAFMDYNDIMDVLEEIMRSI 252



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K   YDL+ +G E+ SG  R H  E + +     G+     E+        F  GMPPH 
Sbjct: 342 KTESYDLILDGIEVVSGATRIHRREDLEREMRERGLDPAAFESHLS----VFDWGMPPHA 397

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G +R++M LLG KNVRE  L+P
Sbjct: 398 GFGMGFNRLLMSLLGLKNVREAVLYP 423


>gi|229155785|ref|ZP_04283891.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228627771|gb|EEK84492.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 428

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C   G    G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 1   MKRSLTKECTKQG----GKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 56

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G ++  +   +        +EL A ++++++ AE+LP  +  ++ +
Sbjct: 57  ----VDVESVVHVIGEIVETTKTELG-------VELLAHEVKVINGAEQLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++  ++S    +   +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVLSLRHERIAAIFKVKSTFVHSFSEFLAENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 224 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 262



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F+  G+      ++F      F+ G PPHGG   
Sbjct: 343 FDLLYKGLEITSGAQRIHNYEMLLASFNEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V  LL   NVRE S FP
Sbjct: 399 GLERVVYKLLELTNVREASAFP 420


>gi|229109657|ref|ZP_04239243.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228673698|gb|EEL28956.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock1-15]
          Length = 432

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 5   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++ +
Sbjct: 61  ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +FI   TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFIRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+  E    +F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYELLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV  LL   NVRE S FP
Sbjct: 403 GLERIVYKLLELTNVREASAFP 424


>gi|229184424|ref|ZP_04311631.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228599220|gb|EEK56833.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 432

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C +      G  V L GWV ++R  G + FL +RD  G+ Q V   + A F+
Sbjct: 5   MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++ +
Sbjct: 61  ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEKELQLLQI 266



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 24/131 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I  +P             A   +TMP     S+  +         +DL+  G EI 
Sbjct: 318 EFVFITHYP-----------KEARPMYTMPHKENASITDS---------FDLLYKGLEIT 357

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  E++L +F   G+  +     F      F+ G PPHGG   G++R+V  LL 
Sbjct: 358 SGAQRIHNYEMLLASFKEKGLHPDT----FQSYLNTFRYGCPPHGGFGIGLERVVYKLLE 413

Query: 553 AKNVREVSLFP 563
             NVRE S FP
Sbjct: 414 LSNVREASAFP 424


>gi|224056100|ref|XP_002194194.1| PREDICTED: aspartyl-tRNA synthetase [Taeniopygia guttata]
          Length = 547

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 159/357 (44%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL +      V + G +H  R  G   FL +R   + I  +VA    A  ++ K   ++ 
Sbjct: 96  DLTLEKADEEVWVRGRIHTSRAKGKQCFLVLRQQQFNIQALVAVGQHASKQMVKFAANIT 155

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117
            E ++ I+G+V  R A           +EL  Q+I ++S AE  LPL         V GE
Sbjct: 156 KESIVDIEGVV--RKAHQKIGGCTQQDVELHVQRIYVISSAEPRLPLQLDDAVRPEVEGE 213

Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            +   ++    R   R +DLR  T       ++ I    R  +I + F+E  TP + +++
Sbjct: 214 EDGRATVNQDTRLDNRIIDLRTSTSQAIFCLQSGICQLFRETLIRKGFVEIQTPKIISAA 273

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F + P FR ED  + R   E
Sbjct: 274 SEGGANVFTVSYFKTSAYLA--QSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHLTE 331

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        D+I +T+  + +G+ E F     TVS  F           LR
Sbjct: 332 FVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 391

Query: 277 ICYDDAI---RRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y + +   R  G    D+ DL  P   ++  + +    ++F +  K  L+V P Y
Sbjct: 392 LEYREGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 448



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 462 YDMFMRGEEILSGAQRIHDPQLLTERAKHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 517

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 518 GLERVTMLYLGLHNVRQTSMFP 539


>gi|149730553|ref|XP_001490073.1| PREDICTED: similar to Aspartyl-tRNA synthetase, cytoplasmic
           (Aspartate--tRNA ligase) (AspRS) (Cell
           proliferation-inducing gene 40 protein) [Equus caballus]
          Length = 501

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 162/358 (45%), Gaps = 47/358 (13%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SV 65
            +L V      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++
Sbjct: 49  SNLTVKKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANI 108

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFG 116
             E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL         V G
Sbjct: 109 NKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEVEG 166

Query: 117 EREYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
           E E   ++    R   R +DLR  T       ++ I +  R  +I + F+E  TP + ++
Sbjct: 167 EEEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISA 226

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   
Sbjct: 227 ASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLT 284

Query: 233 EFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------L 275
           EF  LD+EM+F        ++I +T+  + +G+ E F     TV+  F           L
Sbjct: 285 EFVGLDIEMAFSYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTL 344

Query: 276 RICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           R+ Y +A   +R  G    D+ DL  P   ++  + +    ++F +  K  L+V P Y
Sbjct: 345 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|197102148|ref|NP_001125925.1| aspartyl-tRNA synthetase, cytoplasmic [Pongo abelii]
 gi|75070680|sp|Q5R9I5|SYDC_PONAB RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|55729693|emb|CAH91575.1| hypothetical protein [Pongo abelii]
          Length = 501

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL +      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL +           
Sbjct: 110 KESIVDVEGVV--RKVNQKIESCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++  L Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAY--LAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F     TV+  F           LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++ H + E +  ++F +  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLIKEKY-DTDFYILDKYPLAVRPFY 402



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|229167055|ref|ZP_04294799.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228616408|gb|EEK73489.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 437

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C + G    G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 10  MKRSLTRECTEHG----GKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 64

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ I G ++      +        +E+ A ++++L+ AE LP  +  ++ +
Sbjct: 65  ---RVDVESVVQIIGEIVETPKTELG-------VEVLAHEVKVLNGAEPLPFEINKKKLQ 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 115 VGLDQLLNERVLSLRHERIAAIFKVKSILVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 175 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 232

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 233 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 271



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  +++L +F   G+  E    +F      F+ G PPHGG   
Sbjct: 352 FDLLYKGLEITSGAQRIHNYDMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 407

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V  LL   NVRE S FP
Sbjct: 408 GLERVVYKLLELTNVREASAFP 429


>gi|6166300|gb|AAF04770.1|AF104224_4 aspartyl-tRNA synthetase [Listeria monocytogenes]
          Length = 117

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/112 (43%), Positives = 66/112 (58%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA 
Sbjct: 2   YDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIAL 61

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+
Sbjct: 62  GLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVK 113


>gi|228985294|ref|ZP_04145457.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228774449|gb|EEM22852.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 428

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C   G    G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 1   MKRSLTKECTKQG----GKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 56

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G ++  +   +        +EL A ++++++ AE+LP  +  ++ +
Sbjct: 57  ----VDVESVVHVIGEIVETTKTELG-------VELLAHEVKVINGAEKLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++  ++S    +   +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVLSLRHERIATIFKVKSTFVHSFSEFLAENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 224 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 262



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F+  G+      ++F      F+ G PPHGG   
Sbjct: 343 FDLLYKGLEITSGAQRIHNYEMLLASFNEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V  LL   NVRE S FP
Sbjct: 399 GLERVVYKLLELTNVREASAFP 420


>gi|332236935|ref|XP_003267655.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 1
           [Nomascus leucogenys]
          Length = 501

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 160/358 (44%), Gaps = 49/358 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL        V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 50  DLTTQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL +           
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F     TV+  F           LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++ H V E +  ++F +  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|229196430|ref|ZP_04323177.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228587067|gb|EEK45138.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 428

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C   G    G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 1   MKRSLTKECTKQG----GKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 56

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G ++  +   +        +EL A ++++++ AE LP  +  ++ +
Sbjct: 57  ----VDVESVVHVIGEIVETTKTELG-------VELLAHEVKVINGAEPLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVLSLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 224 EIGFINDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 262



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F+  G+      ++F      F+ G PPHGG   
Sbjct: 343 FDLLYKGLEITSGAQRIHNYEMLLASFNEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V  LL   NVRE S FP
Sbjct: 399 GLERVVYKLLELTNVREASAFP 420


>gi|78045531|ref|NP_001030257.1| aspartyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|110287976|sp|Q3SYZ4|SYDC_BOVIN RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|74267650|gb|AAI03320.1| Aspartyl-tRNA synthetase [Bos taurus]
          Length = 501

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 161/358 (44%), Gaps = 47/358 (13%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SV 65
            DL V   G  V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++
Sbjct: 49  SDLTVQKAGEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANI 108

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFG 116
             E ++ ++G+V  R       +     +EL  QKI ++S AE  LPL         V G
Sbjct: 109 NKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISSAEPRLPLQLDDAVRPEVEG 166

Query: 117 EREYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
           E E   ++    R   R +DLR  T       ++ I +  R  +  + F+E  TP + ++
Sbjct: 167 EEEGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHPFRETLTNKGFVEIQTPKIISA 226

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   
Sbjct: 227 ASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLT 284

Query: 233 EFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------L 275
           EF  LD+EM+F        ++I +T+  + +G+ + F     TV+  F           L
Sbjct: 285 EFVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTL 344

Query: 276 RICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           R+ Y +A   +R  G    D+ DL  P   ++  + +    ++F +  K  L+V P Y
Sbjct: 345 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 402



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLVTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|167632830|ref|ZP_02391156.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|254743599|ref|ZP_05201284.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|167531642|gb|EDR94307.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0442]
          Length = 432

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 125/262 (47%), Gaps = 15/262 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V L GWV ++R  G + FL +RD  G+ Q V   + A F+    V  E ++ + G +
Sbjct: 18  GKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK----VDVESIVHVIGEI 73

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRD 136
           +  S   +        +E+ A +++IL+ AE LP  +  ++ +         R L LR +
Sbjct: 74  VETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQVGLDQLLNERVLSLRHE 126

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                   ++ ++ S    +I  +F    TP + +   EG  +        + ++ A  Q
Sbjct: 127 RTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAYLA--Q 184

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMEN 255
           +PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+E+ F+    +++    +
Sbjct: 185 SPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHEVMQLETD 244

Query: 256 VLRGVFEEFSNGNTVSNNFLRI 277
           VLR +F++ +         L+I
Sbjct: 245 VLRYMFQQVAKNCEKELQLLQI 266



 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLDSFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV  LL   NVRE S FP
Sbjct: 403 GLERIVYKLLELSNVREASAFP 424


>gi|229074900|ref|ZP_04207909.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228708237|gb|EEL60401.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 432

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 123/258 (47%), Gaps = 15/258 (5%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           S        VG  V L GWV ++R  G + FL +RD  G+ Q V   + A ++    V  
Sbjct: 8   SLTQASTEHVGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK----VDV 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRF 126
           E V+ I G ++  S   +        +E+ A ++++L+ AE+LP  +  ++ +       
Sbjct: 64  ESVVQIVGEIVETSKTELG-------VEVLAHEVKVLNGAEQLPFELNKKKLQVGLDQLL 116

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR +        +  +  S    +   +FI   TP + +   EG  +       
Sbjct: 117 NERVLSLRHERTAAIFKVKATLAQSFSDYLTENDFIRIFTPKIVSQGAEGGANVFKLPYF 176

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+E+ F++ 
Sbjct: 177 QKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIDD 234

Query: 247 -DDILNTMENVLRGVFEE 263
             +++    +VLR +F++
Sbjct: 235 FHEVMQLETDVLRYMFQQ 252



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I  +P             A   +TMP     S+  +         +DL+  G EI 
Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENPSITDS---------FDLLYKGLEIT 357

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  +++L +F   G+  E    +F      F+ G PPHGG   G++RIV  LL 
Sbjct: 358 SGAQRIHNYDLLLASFKEKGLHLE----KFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413

Query: 553 AKNVREVSLFP 563
             NVRE S FP
Sbjct: 414 LTNVREASAFP 424


>gi|15026660|gb|AAK81488.1|AE007853_3 Aspartyl/asparaginyl-tRNA synthetase [Clostridium acetobutylicum
           ATCC 824]
          Length = 479

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 18/260 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+L GWVH++R  G I F+ +RD  GI Q V +         K ++ E V+ I+G+V   
Sbjct: 71  VKLQGWVHKLRKLGKIAFVLLRDRTGIIQCVVDAKKID---VKELKLESVVEIEGIVKEN 127

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE-REYPESIRFKYRFLDLRRDTL 138
                      G+ E+    I+ LS A E++P+ +  E  E       + R L +R   +
Sbjct: 128 E----------GRFEIQVNSIKTLSKALEKIPIEINKEDMELNIDTLIENRILSMRNSRV 177

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
           +      T I +     ++   F E  TP + +   EG  +       ++ ++  L Q+P
Sbjct: 178 NSVFKIETEIAHGFSEFLVKNGFTEIYTPKIVSEGAEGGTELFKLKYFDKEAY--LAQSP 235

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVL 257
           Q YKQ+++A+G++R F+I   +R E   + R   E+  +D+EM F+  + D++     +L
Sbjct: 236 QFYKQMMVAAGYERVFEIGHVYRAESHDTKRHLNEYISMDLEMGFINDEMDLIRFEIELL 295

Query: 258 RGVFEEFSNGNTVSNNFLRI 277
           + +F+      + S   L++
Sbjct: 296 KYIFQNVRQKCSKSIELLKV 315



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI +GG R +  +++ Q+  + G+  E     F      F+ GMPPHGG+A 
Sbjct: 394 FDLIFRGMEITTGGQRINDYDMLRQSMLDKGLKVE----SFKSYLDVFKFGMPPHGGLAI 449

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++RI + LL   N+RE + F
Sbjct: 450 GLERITIKLLNLDNIREAAFF 470


>gi|312074257|ref|XP_003139889.1| DRS-2 protein [Loa loa]
 gi|307764948|gb|EFO24182.1| DRS-2 protein [Loa loa]
          Length = 218

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 89/182 (48%), Gaps = 12/182 (6%)

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL--KGNDL 474
           R+ + + + +      EF WI  FP +  N E  ++  AH+PFT P      L    N L
Sbjct: 16  RHLVGEAMHLRAEQRMEFVWITHFPLFSVNAE-GRLQSAHHPFTAPIPDDMPLLYDPNKL 74

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLYRAFQCGM 533
           LSI    YDLV NG E+  G IR H  +V     S + G   E +E+    + +A   G 
Sbjct: 75  LSITGQHYDLVLNGVELGGGSIRIHNEDVQRHVLSTILGEPSEELEH----MLKALSYGA 130

Query: 534 PPHGGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGG A G+DR V LL+G  +    +R+V  FP S+   DL+   P   +  QL   G+
Sbjct: 131 PPHGGFAIGLDRYVALLVGRGDSSVPIRDVIAFPKSKEGNDLMTRCPVETTSSQLSRYGI 190

Query: 590 RI 591
            +
Sbjct: 191 SL 192


>gi|213585320|ref|ZP_03367146.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 100

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 49/102 (48%), Positives = 69/102 (67%), Gaps = 3/102 (2%)

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R +
Sbjct: 1   FKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHL 59

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           + E    +    +F  + + +A RRYG+DKPDLRNP+ + +V
Sbjct: 60  WLEVKGVDL--GDFPVMTFAEAERRYGSDKPDLRNPMELVDV 99


>gi|73984263|ref|XP_848666.1| PREDICTED: similar to Aspartyl-tRNA synthetase (Aspartate--tRNA
           ligase) (AspRS) isoform 2 [Canis familiaris]
          Length = 501

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 162/358 (45%), Gaps = 47/358 (13%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SV 65
            DL V      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++
Sbjct: 49  SDLTVHKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANI 108

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFG 116
             E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL         V G
Sbjct: 109 NKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEVEG 166

Query: 117 EREYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
           E E   ++    R   R +DLR  T       ++ I +  R  +I + F+E  TP + ++
Sbjct: 167 EEEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISA 226

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   
Sbjct: 227 ASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLT 284

Query: 233 EFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------L 275
           EF  LD+EM+F        ++I +T+  + +G+ + F     TV+  F           L
Sbjct: 285 EFVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTL 344

Query: 276 RICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           R+ Y +A   +R  G    D+ DL  P   ++  + +    ++F +  K  L+V P Y
Sbjct: 345 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|52143256|ref|YP_083573.1| aspartyl-tRNA synthetase [Bacillus cereus E33L]
 gi|51976725|gb|AAU18275.1| aspartate--tRNA ligase (aspartyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 432

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 5   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G ++  +   +        +EL A ++++++ AE+LP  +  ++ +
Sbjct: 61  ----VDVESVVHVIGEIVETTKTELG-------VELLAHEVKVINGAEQLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++  ++S    +   +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKSTFVHSFSEFLTENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+SF+    +++    +VLR +F++ +         L+I
Sbjct: 228 ELSFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I  +P             A   +TMP     S+  +         +DL+  G EI 
Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENSSITDS---------FDLLYKGLEIT 357

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  E++L +F   G+      ++F      F+ G PPHGG   G++RIV  LL 
Sbjct: 358 SGAQRIHNYEMLLDSFKGKGLHP----DKFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413

Query: 553 AKNVREVSLFP 563
             NVRE S FP
Sbjct: 414 LSNVREASAFP 424


>gi|325510972|gb|ADZ22608.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 353

 Score = 98.2 bits (243), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 18/260 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+L GWVH++R  G I F+ +RD  GI Q V +         K ++ E V+ I+G+V   
Sbjct: 17  VKLQGWVHKLRKLGKIAFVLLRDRTGIIQCVVDAKKID---VKELKLESVVEIEGIVKEN 73

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE-REYPESIRFKYRFLDLRRDTL 138
                      G+ E+    I+ LS A E++P+ +  E  E       + R L +R   +
Sbjct: 74  E----------GRFEIQVNSIKTLSKALEKIPIEINKEDMELNIDTLIENRILSMRNSRV 123

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
           +      T I +     ++   F E  TP + +   EG  +       ++ ++  L Q+P
Sbjct: 124 NSVFKIETEIAHGFSEFLVKNGFTEIYTPKIVSEGAEGGTELFKLKYFDKEAY--LAQSP 181

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVL 257
           Q YKQ+++A+G++R F+I   +R E   + R   E+  +D+EM F+  + D++     +L
Sbjct: 182 QFYKQMMVAAGYERVFEIGHVYRAESHDTKRHLNEYISMDLEMGFINDEMDLIRFEIELL 241

Query: 258 RGVFEEFSNGNTVSNNFLRI 277
           + +F+      + S   L++
Sbjct: 242 KYIFQNVRQKCSKSIELLKV 261


>gi|161723224|ref|NP_350148.2| aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
          Length = 425

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 127/260 (48%), Gaps = 18/260 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+L GWVH++R  G I F+ +RD  GI Q V   D+   ++ K ++ E V+ I+G+V   
Sbjct: 17  VKLQGWVHKLRKLGKIAFVLLRDRTGIIQCVV--DAKKIDV-KELKLESVVEIEGIVKEN 73

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE-REYPESIRFKYRFLDLRRDTL 138
                      G+ E+    I+ LS A E++P+ +  E  E       + R L +R   +
Sbjct: 74  E----------GRFEIQVNSIKTLSKALEKIPIEINKEDMELNIDTLIENRILSMRNSRV 123

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
           +      T I +     ++   F E  TP + +   EG  +       ++ ++  L Q+P
Sbjct: 124 NSVFKIETEIAHGFSEFLVKNGFTEIYTPKIVSEGAEGGTELFKLKYFDKEAY--LAQSP 181

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVL 257
           Q YKQ+++A+G++R F+I   +R E   + R   E+  +D+EM F+  + D++     +L
Sbjct: 182 QFYKQMMVAAGYERVFEIGHVYRAESHDTKRHLNEYISMDLEMGFINDEMDLIRFEIELL 241

Query: 258 RGVFEEFSNGNTVSNNFLRI 277
           + +F+      + S   L++
Sbjct: 242 KYIFQNVRQKCSKSIELLKV 261



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI +GG R +  +++ Q+  + G+  E     F      F+ GMPPHGG+A 
Sbjct: 340 FDLIFRGMEITTGGQRINDYDMLRQSMLDKGLKVE----SFKSYLDVFKFGMPPHGGLAI 395

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++RI + LL   N+RE + F
Sbjct: 396 GLERITIKLLNLDNIREAAFF 416


>gi|229150439|ref|ZP_04278655.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228632932|gb|EEK89545.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 432

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 5   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++ +
Sbjct: 61  ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYIFQQVAKKCEIELQLLQI 266



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+  E    +F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV  LL   NVRE S FP
Sbjct: 403 GLERIVYKLLELTNVREASAFP 424


>gi|313113843|ref|ZP_07799409.1| OB-fold nucleic acid binding domain protein [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310623809|gb|EFQ07198.1| OB-fold nucleic acid binding domain protein [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 444

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 126/255 (49%), Gaps = 24/255 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           +G  V++ G++  +R    + F+ ++D  G  Q+      +PD    +    +  + V+ 
Sbjct: 13  IGGTVKVQGFIENLRNSKYMAFIVLKDITGKLQITVEKEDHPD--LVDTIDQLTPDSVIT 70

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-----PVFGEREYPE--SI- 124
           + G V+       N  +  G +E+  + IEI S+A  LP+         +++  E  SI 
Sbjct: 71  VTGKVVE------NDYVKMGGVEMIPESIEIESIANALPIVRKEIAATKKKKAVERSSID 124

Query: 125 -RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  YR++DLR D        ++  +N+MR  ++  NFIE  TP L A++ E   +    
Sbjct: 125 QRIDYRWIDLRTDENQLMFKAQSCFVNAMRKFLLDRNFIEIHTPKLIAAASESGSEVFKV 184

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              ++ ++  L Q+PQ YKQ+ MA+GF+R F+  P FR E   +++   EF   D+E S+
Sbjct: 185 DYFDRNAY--LAQSPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHSTEFSGFDLEFSY 242

Query: 244 VEQ-DDILNTMENVL 257
           +    D++   E +L
Sbjct: 243 ITSYKDVMKMEEELL 257



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 5/71 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+  G EI +G  R H  EV+ +     G++ +V   +F      FQ G PPHGG   
Sbjct: 361 YDLIWRGVEITTGAQREHRYEVLKKQAEEKGLADDV---KF--YLEFFQYGCPPHGGFGL 415

Query: 542 GIDRIVMLLLG 552
           GIDR+ MLL G
Sbjct: 416 GIDRLTMLLCG 426


>gi|30020303|ref|NP_831934.1| aspartyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229043956|ref|ZP_04191649.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229127613|ref|ZP_04256602.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|296502783|ref|YP_003664483.1| aspartyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|29895854|gb|AAP09135.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228655690|gb|EEL11539.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228725367|gb|EEL76631.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH676]
 gi|296323835|gb|ADH06763.1| aspartyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 432

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 5   MKRSLTKEC----TKKSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G       ET+  +     +E+ A ++++++ AE LP  +  ++ +
Sbjct: 61  ----VDVESVVHVIG-------ETVETSKTELGVEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+  E    +F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYELLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV  LL   NVRE S FP
Sbjct: 403 GLERIVYKLLELTNVREASAFP 424


>gi|228939329|ref|ZP_04101921.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228820353|gb|EEM66386.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326939905|gb|AEA15801.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 432

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 5   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G ++  S   +        IE+ A ++++++ AE LP  +  ++ +
Sbjct: 61  ----VDVESVVHVIGEIVETSKTELG-------IEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+  E    +F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV  +L   NVRE S FP
Sbjct: 403 GLERIVYKILELTNVREASAFP 424


>gi|309790508|ref|ZP_07685066.1| asparaginyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308227424|gb|EFO81094.1| asparaginyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 440

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 128/281 (45%), Gaps = 30/281 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCIDGLV 77
           V LSGW+H     G +IFL +RD  G+ Q V    N   ACF  A+ +  E    I G V
Sbjct: 20  VTLSGWIHNKTEKGKLIFLMLRDGSGMIQCVVFKKNVSEACFSQAQQLTQESACRITGAV 79

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +      +    +G  EL  Q++EI+S+ ++ P+     +E+      ++R L +R   
Sbjct: 80  RA------DTRAPSG-YELDVQEVEIISLTQDYPI---SPKEHGVEFLMEHRHLWVRSSK 129

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  +I + +  + A+ FI   TPILTA++ EG  +       + G  Y L Q 
Sbjct: 130 QHALLRIRAEVIAAAQEWLNAQGFIRFDTPILTATAAEGTTNLFGTDYFDLGRAY-LAQT 188

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN-- 255
            Q Y +  M S F + +   P FR E  ++ R   EF+ ++ E++F E  D L   E   
Sbjct: 189 GQLYVESGMMS-FGKVYCFGPTFRAEKSKTRRHLTEFWMIEPEVAFAEHADNLVLQEQFV 247

Query: 256 --VLRGVFEEFSNG-----------NTVSNNFLRICYDDAI 283
             +++ V E  S               V   F R+ YD+AI
Sbjct: 248 SAIVQRVLERRSEDLRVLERDLEPLKRVVPPFPRLTYDEAI 288


>gi|118477616|ref|YP_894767.1| aspartyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196046105|ref|ZP_03113333.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|118416841|gb|ABK85260.1| aspartyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196023160|gb|EDX61839.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB108]
          Length = 432

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C +      G  V L GWV ++R  G + FL +RD  G+ Q V   + A F+
Sbjct: 5   MKRSLTKECTE----KSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E ++ + G ++  S   +        +E+ A +++IL+  E LP  +  ++ +
Sbjct: 61  ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKILNGTEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTASIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 228 EIGFINDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLTSFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V   L   NVRE S FP
Sbjct: 403 GLERVVYKFLELSNVREASAFP 424


>gi|213021628|ref|ZP_03336075.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 145

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 50/138 (36%), Positives = 76/138 (55%)

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           H+PFT P+    S          A  YD+V NG+E+  G +R H  E+    F  +GI++
Sbjct: 3   HHPFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINE 62

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
           +    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+  +
Sbjct: 63  QEQREKFGFLLDALKYGTPPHVGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEA 122

Query: 576 PSTVSVEQLRELGLRIVE 593
           PS  +   L ELG+++V+
Sbjct: 123 PSFANQAALTELGIQVVK 140


>gi|15896232|ref|NP_349581.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|15026034|gb|AAK80921.1|AE007794_13 Aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510387|gb|ADZ22023.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 430

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 18/249 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  + L GW+H++   G + F+ +RD  GI Q+VA  +         +R+E  + + G V
Sbjct: 15  GEEITLQGWIHKIYDLGHVNFVRLRDKTGIVQLVAQKEQLA-----GLRNETCIKVKG-V 68

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGER-EYPESIRFKYRFLDLR 134
           +S++ + I+       +E+  ++IE+L     ++LP  + G++       +  +R + L+
Sbjct: 69  LSKNDKAIDG------MEVQVKEIEVLGKVYYDKLPFDINGKKINAALETQLDHRNVSLK 122

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           + ++      +  I    R  +   NF E  TP + AS  EG  +    +  +  +F  L
Sbjct: 123 KPSVMAVFKIQEEIGECFRKFLKLNNFTEVHTPKILASGTEGGSELFTVNYFDHRAF--L 180

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTM 253
            Q+PQ YKQ+++  GF++ F++   +R E   + R   E+  LD EM F+E +++I++  
Sbjct: 181 AQSPQFYKQMMVGVGFEKVFEVGHAYRAELHNTYRHLNEYVSLDAEMGFIEDENEIMDLE 240

Query: 254 ENVLRGVFE 262
           E  +  +FE
Sbjct: 241 EGFINYLFE 249



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 13/105 (12%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +TMP   +E        + K+F  DL+  G EI +GG R H  +++++A  N G   E  
Sbjct: 331 YTMPDDEIEG-------ASKSF--DLIYKGLEITTGGQRIHDHDMLVEAIKNKGFKAE-- 379

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              F      F+ GMPPHGG A G++R+ M +LG +N+RE SL P
Sbjct: 380 --EFEFYTENFRYGMPPHGGFAIGLERLTMQILGLENIREASLLP 422


>gi|228958486|ref|ZP_04120206.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228801113|gb|EEM48010.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 432

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 5   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
           I      E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++ +
Sbjct: 61  ID----VESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDL 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+  E    +F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV  LL   NVRE S FP
Sbjct: 403 GLERIVYKLLELTNVREASAFP 424


>gi|229144809|ref|ZP_04273206.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228638531|gb|EEK94964.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
          Length = 432

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 5   MKRSLTKEC----TKKSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G       ET+  +     +E+ A ++++++ AE LP  +  ++ +
Sbjct: 61  ----VDVESVVHVIG-------ETVETSKTELGVEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+  E    +F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYELLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV  LL   NVRE S FP
Sbjct: 403 GLERIVYKLLELTNVREASAFP 424


>gi|228972207|ref|ZP_04132822.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978822|ref|ZP_04139191.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228780898|gb|EEM29107.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228787520|gb|EEM35484.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
          Length = 428

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 1   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 56

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G ++  S   +        IE+ A ++++++ AE LP  +  ++ +
Sbjct: 57  ----VDVESVVHVIGEIVETSKTELG-------IEVLAHEVKVINGAEPLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +    +    L+I
Sbjct: 224 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 262



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+  E    +F      F+ G PPHGG   
Sbjct: 343 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV  +L   NVRE S FP
Sbjct: 399 GLERIVYKILELTNVREASAFP 420


>gi|74141887|dbj|BAE41011.1| unnamed protein product [Mus musculus]
          Length = 501

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 161/357 (45%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL V      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 50  DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL         V GE
Sbjct: 110 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167

Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            +   ++    R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
              LD+EM+F        ++I +T+  + +G+ E F     TVS  F           LR
Sbjct: 286 CVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++  + +    ++F V  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|307719886|ref|YP_003875418.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306533611|gb|ADN03145.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 424

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 124/259 (47%), Gaps = 25/259 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            S  G  V + GWVHR+R  GGI F+ +RD  G  Q+V        E +  +  E V+ +
Sbjct: 9   ASHTGKDVVVKGWVHRIRELGGISFIILRDRSGEVQLV-------LEGSADLTLESVISV 61

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFK----Y 128
            G V +       A I  G+IE       +L+ AE +LP+P+    + P  +       +
Sbjct: 62  KGRVEANEKAPGGAEIHVGEIE-------VLARAEPDLPIPI---NQDPSQLSLDALLDH 111

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R L LR   +      +  ++      + ++ F E  T  L A+  EG       +  ++
Sbjct: 112 RMLSLRIPKIRSIFTLQAGLVQYFADYLRSQGFSEIKTSKLIATGTEGGTGLFEVNYFDR 171

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD- 247
             + A  Q+PQ YKQ ++ASG +R F+I   +R E   + R   E+  LD+EM+F+E + 
Sbjct: 172 KVYLA--QSPQFYKQAMVASGMERVFEIGMAYRAEKHDTPRHLNEYVSLDVEMAFIETEH 229

Query: 248 DILNTMENVLRGVFEEFSN 266
           D+++  E +L  +FE+  +
Sbjct: 230 DLMDLEEGILAYMFEKVKS 248



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 6/88 (6%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           S K+F  DL+  G EI +GG R +   ++ +     G+++E +    GG    F+ G PP
Sbjct: 335 STKSF--DLLFRGLEITTGGRRINEYSMLKETLPLFGLTEEGL----GGYVEIFKYGCPP 388

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           HGG A G++R+   +LG +NVRE SLFP
Sbjct: 389 HGGFAIGLERLTQKILGLQNVREASLFP 416


>gi|228952555|ref|ZP_04114631.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228807021|gb|EEM53564.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 428

 Score = 97.4 bits (241), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 1   MKRSLTKECK----KQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 56

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++ +
Sbjct: 57  ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINSAEPLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +    +    L+I
Sbjct: 224 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 262



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ G PPHGG   
Sbjct: 343 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V  LL   NVRE S FP
Sbjct: 399 GLERVVYKLLELTNVREASAFP 420


>gi|295105436|emb|CBL02980.1| Aspartyl/asparaginyl-tRNA synthetases [Faecalibacterium prausnitzii
           SL3/3]
          Length = 444

 Score = 97.4 bits (241), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 20/253 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCID 74
           +G  V++ G++  +R    + F+ ++D  G  Q+           +    +  + V+ + 
Sbjct: 13  IGGTVKVQGFIENLRNSKYMAFIVLKDITGKLQITVEKADHPELVDTIDQLTPDSVITVT 72

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-----PVFGEREYPE--SI--R 125
           G VM       N  +  G +E+  + IE+ S A  LP+         +++  E  SI  R
Sbjct: 73  GKVME------NDYVKMGGVEMIPESIEVESTANALPIVRKEIAATKKKKAVERSSIDQR 126

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             YR++DLR D        ++  +N+MR  ++  NFIE  TP L A++ E   +      
Sbjct: 127 IDYRWIDLRTDENQLMFKAQSCFVNAMRKFLLDRNFIEIHTPKLIAAASESGSEVFKVDY 186

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ ++  L Q+PQ YKQ+ MA+GF+R F+  P FR E   +++   EF   D+E S++ 
Sbjct: 187 FDRNAY--LAQSPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHATEFSGFDLEFSYIT 244

Query: 246 Q-DDILNTMENVL 257
              D++   E +L
Sbjct: 245 SFKDVMKMEEELL 257



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 5/71 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+  G EI +G  R H  EV+ +     G++ +V   +F      FQ G PPHGG   
Sbjct: 361 YDLIWRGVEITTGAQREHRYEVLKKQAEEKGLADDV---KF--YLEFFQYGCPPHGGFGL 415

Query: 542 GIDRIVMLLLG 552
           GIDR+ MLL G
Sbjct: 416 GIDRLTMLLCG 426


>gi|228991204|ref|ZP_04151162.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus pseudomycoides DSM
           12442]
 gi|228768428|gb|EEM17033.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus pseudomycoides DSM
           12442]
          Length = 432

 Score = 97.4 bits (241), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 123/246 (50%), Gaps = 17/246 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L GWV ++R  G I FL +RD  G+ Q V   + A ++    V  E V+ I G ++  
Sbjct: 21  VLLQGWVKKIRHLGNISFLLLRDRTGVIQCVLEKELAGYK----VDVESVVQIIGELVET 76

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLDLRRDTL 138
           +   +        +EL  +++++L+ AE LP  V  +R+    +      R + +R + +
Sbjct: 77  TKTELG-------VELLVEEVKVLNTAEPLPFEV-NKRKLQVGLDQMLNERVISIRHERI 128

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                 ++ ++ +    +I  +F    TP + +   EG  +        + ++  L Q+P
Sbjct: 129 QAIFTIQSTLVQAFSEFLIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAY--LAQSP 186

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257
           Q YKQ+++A GF+  F+IAP +R E   S R   E+  LD+EM F+E   +++    +VL
Sbjct: 187 QFYKQMMVAGGFELVFEIAPVYRAEHHNSSRHLNEYISLDVEMGFIEDFYEVMALEADVL 246

Query: 258 RGVFEE 263
           R +FE+
Sbjct: 247 RYMFEQ 252



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H   ++L +F   G+  E     F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHEYRMLLASFKEKGLQPE----NFESYINTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V   L   NVRE S FP
Sbjct: 403 GLERLVYKFLELSNVREASAFP 424


>gi|160945374|ref|ZP_02092600.1| hypothetical protein FAEPRAM212_02896 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443105|gb|EDP20110.1| hypothetical protein FAEPRAM212_02896 [Faecalibacterium prausnitzii
           M21/2]
          Length = 444

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 20/253 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCID 74
           +G  V++ G++  +R    + F+ ++D  G  Q+           +    +  + V+ + 
Sbjct: 13  IGGTVKVQGFIENLRNSKYMAFIVLKDITGKLQITVEKADHPELVDTIDQLTPDSVITVT 72

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-----PVFGEREYPE--SI--R 125
           G VM       N  +  G +E+  + IE+ S A  LP+         +++  E  SI  R
Sbjct: 73  GKVME------NDYVKMGGVEMIPESIEVESTANALPIVRKEIAATKKKKAVERSSIDQR 126

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             YR++DLR D        ++  +N+MR  ++  NFIE  TP L A++ E   +      
Sbjct: 127 IDYRWIDLRTDENQLMFKAQSCFVNAMRKFLLDRNFIEIHTPKLIAAASESGSEVFKVDY 186

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ ++  L Q+PQ YKQ+ MA+GF+R F+  P FR E   +++   EF   D+E S++ 
Sbjct: 187 FDRNAY--LAQSPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHATEFSGFDLEFSYIT 244

Query: 246 Q-DDILNTMENVL 257
              D++   E +L
Sbjct: 245 SFKDVMKMEEELL 257



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 5/71 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+  G EI +G  R H  EV+ +     G++ +V   +F      FQ G PPHGG   
Sbjct: 361 YDLIWRGVEITTGAQREHRYEVLKKQAEEKGLADDV---KF--YLEFFQYGCPPHGGFGL 415

Query: 542 GIDRIVMLLLG 552
           GIDR+ MLL G
Sbjct: 416 GIDRLTMLLCG 426


>gi|315187301|gb|EFU21057.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 424

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 124/259 (47%), Gaps = 25/259 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            S  G  V + GWVHR+R  GGI F+ +RD  G  Q+V        E +  +  E V+ +
Sbjct: 9   ASHTGKDVVVKGWVHRIRELGGISFIILRDRSGEVQLV-------LEGSADLTLESVISV 61

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFK----Y 128
            G V +       A I  G+IE       +L+ AE +LP+P+    + P  +       +
Sbjct: 62  KGRVEANEKAPGGAEIHVGEIE-------VLARAEPDLPIPI---NQDPSQLSLDALLDH 111

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R L LR   +      +  ++      + ++ F E  T  L A+  EG       +  ++
Sbjct: 112 RMLSLRIPKIRTIFTLQAGLVQYFADYLRSQGFSEIKTSKLIATGTEGGTGLFEVNYFDR 171

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD- 247
             + A  Q+PQ YKQ ++ASG +R F+I   +R E   + R   E+  LD+EM+F+E + 
Sbjct: 172 KVYLA--QSPQFYKQAMVASGMERVFEIGMAYRAEKHDTPRHLNEYVSLDVEMAFIETEH 229

Query: 248 DILNTMENVLRGVFEEFSN 266
           D+++  E +L  +FE+  +
Sbjct: 230 DLMDLEEGILAYMFEKVKS 248



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI +GG R H   ++ +     G+++E +    GG    F+ G PPHGG A 
Sbjct: 339 FDLLFRGLEITTGGRRIHEYSMLKETLPLFGLTEEGL----GGYVEIFKYGCPPHGGFAI 394

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+   +LG +NVRE SLFP
Sbjct: 395 GLERLTQKILGLQNVREASLFP 416


>gi|218230781|ref|YP_002366908.1| aspartyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218158738|gb|ACK58730.1| aspartate--tRNA ligase [Bacillus cereus B4264]
          Length = 432

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 5   MKRSLTKECK----KQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++ +
Sbjct: 61  ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDL 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQKVAKKCEIELQLLQI 266



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V  LL   NVRE S FP
Sbjct: 403 GLERVVYKLLELTNVREASAFP 424


>gi|255722135|ref|XP_002546002.1| aspartyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240136491|gb|EER36044.1| aspartyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 578

 Score = 97.1 bits (240), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 132/280 (47%), Gaps = 28/280 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSACFEIAK---- 63
           DL  ++ G  V     VH+ R  G  ++FL +R    + Q +   N D+    ++K    
Sbjct: 117 DLSTANDGDNVIFRARVHKTRQQGATMVFLTLRQQTDLIQALLKTNKDTDSHAVSKQMVK 176

Query: 64  ---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFG--- 116
              S+  E ++ ++G V ++  E I +  +   +E+   KI  I    E+LPL +     
Sbjct: 177 WTGSINLESIVLVEGKV-AKVEEKIKSATVQ-DVEIHISKIYTIQETPEQLPLLIEDASR 234

Query: 117 -EREYPE--------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
            E+E  E          R   R +DLR  T       ++ +    R  +I +NF E  TP
Sbjct: 235 TEQEAEELGLPGVNLDTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLIKKNFTEIHTP 294

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            + A++ EG  +    +     +F A  Q+PQ YKQ L+A+ F++ F+IAP FR E+  +
Sbjct: 295 KIIAAASEGGSNVFQINYFKGSAFLA--QSPQLYKQQLIAADFEKVFEIAPVFRAENSNT 352

Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
            R   EF  LD+EM+F +  D++L  +E +   +F E   
Sbjct: 353 HRHMTEFTGLDLEMAFEQHYDEVLEVLEELFVFIFTELKT 392



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H  E++ +      ++ +V          AF  G PPH G   
Sbjct: 491 YDFFMRGEEILSGAQRIHDPELLKERIRAHEVNPDV--PGLSDYVDAFTYGCPPHAGGGI 548

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM  L  KN+R  SLFP
Sbjct: 549 GLERVVMFFLDLKNIRRASLFP 570


>gi|53133416|emb|CAG32037.1| hypothetical protein RCJMB04_16g4 [Gallus gallus]
          Length = 503

 Score = 97.1 bits (240), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 160/357 (44%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL        V + G VH  R  G   FL +R   + I  +VA    A  ++ K   ++ 
Sbjct: 52  DLTEEKADEVVWVRGRVHTSRAKGKQCFLVLRQQQFNIQALVAVGQHASKQMVKFAANIN 111

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117
            E ++ ++G+V  R A           +EL  Q+I ++S+AE  LPL         V GE
Sbjct: 112 KESIVDVEGVV--RKAHQKIGGCTQQDVELHVQRIYVISLAEPRLPLQLDDAVRPEVEGE 169

Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            +   ++    R   R +DLR  T       ++ I    R  +I + F+E  TP + +++
Sbjct: 170 EDGRATVNQDTRLDNRVIDLRTSTSQAVFCLQSGICQLFRETLIRKGFVEIQTPKIISAA 229

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F + P FR ED  + R   E
Sbjct: 230 SEGGANVFTVSYFKSSAYLA--QSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHLTE 287

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNF-----------LR 276
           F  LD+EM+F        D+I +T+  + +G+ E F +    V+  F           LR
Sbjct: 288 FVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQAEIQMVNKQFPCEPFKFLEPTLR 347

Query: 277 ICYDDAI---RRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A+   R  G    D+ DL  P   ++  + +    ++F +  K  L+V P Y
Sbjct: 348 LEYREAVAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 404



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 418 YDMFMRGEEILSGAQRIHDPQLLTERAKHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 473

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 474 GLERVTMLYLGLHNVRQTSMFP 495


>gi|206972146|ref|ZP_03233094.1| aspartyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|229079384|ref|ZP_04211926.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229178583|ref|ZP_04305947.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|206733069|gb|EDZ50243.1| aspartyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228604741|gb|EEK62198.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228703917|gb|EEL56361.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 432

 Score = 97.1 bits (240), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 5   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++ +
Sbjct: 61  ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V  LL   NVRE S FP
Sbjct: 403 GLERVVYKLLELTNVREASAFP 424


>gi|224476575|ref|YP_002634181.1| asparaginyl-tRNA synthetase [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421182|emb|CAL27996.1| putative asparaginyl-tRNA synthetase [Staphylococcus carnosus
           subsp. carnosus TM300]
          Length = 430

 Score = 97.1 bits (240), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 118/285 (41%), Gaps = 31/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           +G  V +  W+H  R  G I FL +RD  G  Q   V +  D   F  AK++  E  L +
Sbjct: 12  IGQEVTIGAWLHNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEDTFATAKNITQESSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +   +         E+  + I+++  A + P+     + +       +R L L
Sbjct: 72  TGTITEDNRSDLG-------YEMQVKSIDVIQEAHDYPIT---PKNHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +         F++   PILTAS+PEG  +       ++ +F  
Sbjct: 122 RSKKQHAVMKIRNEIIRATYEFFHETGFVKIDPPILTASAPEGTSELFHTKYFDEDAF-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  + + F   P FR E  ++ R   EF+ ++ EM+F E  D L   
Sbjct: 180 LSQSGQLYLEA-AAMAYGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFYEHADSLEVQ 238

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283
           E  +  V +               + S    V   F RI YDDAI
Sbjct: 239 EQYVTHVVQSVLKNCELELKILDRDTSKLEKVKTPFPRITYDDAI 283


>gi|326923086|ref|XP_003207772.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like [Meleagris
           gallopavo]
          Length = 476

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 44/326 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL        V + G VH  R  G   FL +R   + I  +VA    A  ++ K   ++ 
Sbjct: 52  DLSEEKADEVVWVRGRVHTSRAKGKQCFLVLRQQQFNIQALVAVGQHASKQMVKFAANIN 111

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGE 117
            E ++ ++G+V  R A           +EL  Q+I ++S+AE  LPL         V GE
Sbjct: 112 KESIVDVEGVV--RKAHQKIGGCTQQDVELHVQRIYVISLAEPRLPLQLDDAVRPEVEGE 169

Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            +   ++    R   R +DLR  T       ++ I    R  +I + F+E  TP + +++
Sbjct: 170 EDGRATVNQDTRLDNRVIDLRTSTSQAVFCLQSGICQLFRETLIRKGFVEIQTPKIISAA 229

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++  L Q+PQ YKQ+ + + F++ F + P FR ED  + R   E
Sbjct: 230 SEGGANVFTVSYFKSSAY--LAQSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHLTE 287

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        D+I +T+  + +G+ E F      V+  F           LR
Sbjct: 288 FVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQTEIQMVNKQFPCEPFKFLEPTLR 347

Query: 277 ICYDDAI---RRYGT---DKPDLRNP 296
           + Y +A+   R  G    D+ DL  P
Sbjct: 348 LEYREAVAMLREAGVEMGDEEDLSTP 373



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 391 YDMFMRGEEILSGAQRIHDPQLLTERAKHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 446

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 447 GLERVTMLYLGLHNVRQTSMFP 468


>gi|296490538|gb|DAA32651.1| aspartyl-tRNA synthetase, cytoplasmic [Bos taurus]
          Length = 501

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 161/358 (44%), Gaps = 47/358 (13%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SV 65
            DL V   G  V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++
Sbjct: 49  SDLTVQKAGEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANI 108

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFG 116
             E ++ ++G+V  R       +     +EL  QKI ++S AE  LPL         V G
Sbjct: 109 NKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISSAEPRLPLQLDDAVRPEVEG 166

Query: 117 EREYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
           E +   ++    R   R +DLR  T       ++ I +  R  +  + F+E  TP + ++
Sbjct: 167 EEDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLTNKGFVEIQTPKIISA 226

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   
Sbjct: 227 ASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLT 284

Query: 233 EFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------L 275
           EF  LD+EM+F        ++I +T+  + +G+ + F     TV+  F           L
Sbjct: 285 EFVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTL 344

Query: 276 RICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           R+ Y +A   +R  G    D+ DL  P   ++  + +    ++F +  K  L+V P Y
Sbjct: 345 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|182416525|ref|ZP_02947952.1| aspartyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669026|ref|ZP_04529010.1| aspartate--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182379597|gb|EDT77079.1| aspartyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657374|gb|EEP54930.1| aspartate--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 429

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 16/245 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L GWVH++R    + F+ +RD  GI Q+V N +       K +R E  + + G+V   
Sbjct: 17  VLLRGWVHKIRDLAHVSFIMLRDKSGIIQLVCNKEQI-----KGLRLENSVEVRGIVRE- 70

Query: 81  SAETINANIITG-QIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRDTL 138
                N   + G +IE+S+  +      ++LP  + G + +     +  YR + LR    
Sbjct: 71  -----NEKALKGIEIEVSSIDVTGKVYYDKLPFEIQGYKNKVSLETQLDYRTISLRIPKK 125

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                 +  I  S R    + NF E  TP +  S  EG  +        + +F  L Q+P
Sbjct: 126 KAIFKIQNEIEESFRTYFKSNNFEEIHTPKIINSGTEGGSEMFTVDYFGRRAF--LAQSP 183

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVL 257
           Q YKQ+++ +GF+R F++   +R E   + R   E+  LD+EM F+ ++ D++N  E+ L
Sbjct: 184 QFYKQMMVGAGFERVFEVGYAYRAELHNTWRHLNEYVSLDVEMGFIKDEKDLMNVEEDFL 243

Query: 258 RGVFE 262
           R +F+
Sbjct: 244 RYMFK 248



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 8/102 (7%)

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P   ME    N++       +DL+  G EI +GG R H  E++ +     G+  E     
Sbjct: 328 PMYAMECEDNNEMTK----SFDLIYKGVEITTGGQRIHDYEMLKEKMERWGLKLE----D 379

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           F      F+ GMPPHGG A G++RI M +L   N+RE SLFP
Sbjct: 380 FAFYLDTFKYGMPPHGGFAIGLERITMQMLDLGNIREASLFP 421


>gi|148230913|ref|NP_001085490.1| aspartyl-tRNA synthetase [Xenopus laevis]
 gi|49119135|gb|AAH72839.1| MGC80207 protein [Xenopus laevis]
          Length = 530

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 159/357 (44%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL V      V +   VH  R  G   FL +R   + +  +VA  + A  ++ K   ++ 
Sbjct: 79  DLTVQIADETVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGERASKQMVKFAANIT 138

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF--------GE 117
            E ++ ++G+V  R  +    +     +EL  ++I ++S AE  LPL +         GE
Sbjct: 139 KESIVDVEGVV--RKVDQKIESCTQQDVELHIERIYVISAAEPRLPLQLEDAVRPETEGE 196

Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            E   ++    R   R +DLR  T H     ++ I    R  +  + F+E  TP + +++
Sbjct: 197 EEGRATVNQDTRLDNRVIDLRTSTSHSVFGLQSGICQLFRETLTKKGFVEIQTPKIISAA 256

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++  L Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 257 SEGGANVFTVSYFKTSAY--LAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 314

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        D+I +TM  + +G+ E F     TV   F           LR
Sbjct: 315 FVGLDIEMAFNYHYHEVVDEIADTMVQIFKGLQERFQTEIQTVCKQFPCEPFKFLEPTLR 374

Query: 277 ICYDDAI---RRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y + +   R  G    D+ DL  P   ++  + +    ++F +  K  L+V P Y
Sbjct: 375 LEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 431



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +  ++ GI  E    +      +F+ G PPH G   
Sbjct: 445 YDMFMRGEEILSGAQRVHDPQLLTERATHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 500

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 501 GLERVTMLYLGLHNVRQTSMFP 522


>gi|229115695|ref|ZP_04245100.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228667837|gb|EEL23274.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 432

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 121/258 (46%), Gaps = 15/258 (5%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           S        VG  V L GWV ++R  G + FL +RD  G+ Q V     A ++    V  
Sbjct: 8   SLTQASTEHVGKVVLLQGWVKKIRHLGNVSFLLLRDRKGVIQCVLENKLAGYK----VDV 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRF 126
           E V+ I G ++  S   +        +E+ A ++++L+ AE+LP  +  ++ +       
Sbjct: 64  ESVVQIVGEIVETSKTELG-------VEVLAHEVKVLNGAEQLPFELNKKKLQVGLDQLL 116

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR +        +  +  S    +   +FI   TP + +   EG  +       
Sbjct: 117 NERVLSLRHERTAAIFKVKATLAQSFSDYLTENDFIRIFTPKIVSQGAEGGANVFKLPYF 176

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            + ++  L Q+PQ YKQ+ +A G +R F+IAP +R E   S R   E+  LD+E+ F++ 
Sbjct: 177 QKEAY--LAQSPQFYKQMTVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIDD 234

Query: 247 -DDILNTMENVLRGVFEE 263
             +++    +VLR +F++
Sbjct: 235 FHEVMQLETDVLRYMFQQ 252



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I  +P             A   +TMP     S+  +         +DL+  G EI 
Sbjct: 318 EFVFITHYP-----------KEARPMYTMPNNENPSITDS---------FDLLYKGLEIT 357

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  +++L +F   G+  E    +F      F+ G PPHGG   G++RIV  LL 
Sbjct: 358 SGAQRIHNYDLLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGIGLERIVYKLLE 413

Query: 553 AKNVREVSLFP 563
             NVRE S FP
Sbjct: 414 LTNVREASAFP 424


>gi|75764079|ref|ZP_00743678.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74488433|gb|EAO52050.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 437

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C    +   G  V L GWV ++R  G + FL +RD  G+ Q V     A ++
Sbjct: 5   MKRSLTKEC----MEQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENGLAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++ +
Sbjct: 61  ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEILIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+  E    +F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV  LL   NVRE S FP
Sbjct: 403 GLERIVYKLLELTNVREASAFP 424


>gi|320334289|ref|YP_004171000.1| aspartyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755578|gb|ADV67335.1| aspartyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 432

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 130/281 (46%), Gaps = 35/281 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN------PDSACFEIAKS 64
           DL   D G  VRL G+VH  R  GG+ FL +RD  GI Q V        P+S+  E+  +
Sbjct: 17  DLAPHD-GQTVRLQGFVHARRDLGGVQFLVLRDVTGIAQCVGQNLTLPMPESSV-EVIGT 74

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---P 121
           V++                        G  E+ AQ++ +LS A + P     + E+   P
Sbjct: 75  VKAHAK-------------------APGGYEIQAQQVHVLSEAVQAPPVEIPKMEWNVNP 115

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+    YR++ +R       +  +  I+ + R  +I E F E  +P + ++  EG  +  
Sbjct: 116 ETT-LDYRYVTVRGLKERATLKVQAEIVAAFREHLIDEGFTEIYSPKIVSAGAEGGANLF 174

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 Q ++ A  Q+PQ YKQ+++ + F+R F++AP FR E+  + R   E+  LD+E+
Sbjct: 175 ELDYFGQRAYLA--QSPQLYKQIMVGT-FERVFEVAPVFRAEEHATSRHLNEYLSLDVEL 231

Query: 242 SFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
            F+E ++D+++    +L  +        +   + L     D
Sbjct: 232 GFIESEEDVMDVETRLLSAIMTRLRARASAEFDLLGAAIPD 272



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SGG R H   ++LQ+     I    +E    G    F+ GMPPHGG A 
Sbjct: 347 FDLLFRGIEITSGGQRIHEHAMLLQSLREYRIDPAQME----GYTEVFKHGMPPHGGFAI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+   LLG  NVR    FP  ++
Sbjct: 403 GAERLTAKLLGIANVRYARAFPRDRH 428


>gi|315640659|ref|ZP_07895764.1| asparagine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315483598|gb|EFU74089.1| asparagine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 432

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 42/291 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANPDSA-CFEIAKSVRSEWVLCI 73
           VG  V++  WV   R  G I FL +RD     Q  VV N  S   F++AKS+  E  + +
Sbjct: 13  VGETVKIGAWVANKRSSGKIAFLQLRDGTAYFQGVVVKNEVSEEVFQLAKSLTQETSVIV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   S             EL    +E++  +++ P+     +E+       +R L L
Sbjct: 73  TGEIREDSRSKFG-------YELGISNVEVIGESQDYPIT---PKEHGTDFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  +I +        +F++   PILT S+PEG  D    +  +Q ++  
Sbjct: 123 RSSRQHAIMQIRNELIRATYEFFNKHHFVKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L   
Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLEVQ 239

Query: 254 E--------NVL-------------RGVFEEFSNGNTVSNNFLRICYDDAI 283
           E        NVL             R V E+++N       F RI YDDAI
Sbjct: 240 EQYVAFLVQNVLDNCDYALDVLGRDRAVLEKYTN-----LPFPRISYDDAI 285



 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E +L+   N G+S+E     +       + G  PH G   G++R V  
Sbjct: 355 EIIGGSERATDYEFLLEQIKNHGLSEE----EYSWYLDLRRYGSVPHSGFGLGLERTVTW 410

Query: 550 LLGAKNVREVSLFP 563
           + G ++VRE   FP
Sbjct: 411 ISGIEHVREAIPFP 424


>gi|218897182|ref|YP_002445593.1| aspartyl-tRNA synthetase [Bacillus cereus G9842]
 gi|218544808|gb|ACK97202.1| aspartyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 432

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C    +   G  V L GWV ++R  G + FL +RD  G+ Q V     A ++
Sbjct: 5   MKRSLTKEC----MEQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENGLAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++ +
Sbjct: 61  ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEILIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+  E    +F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV  LL   NVRE S FP
Sbjct: 403 GLERIVYKLLELTNVREASAFP 424


>gi|228965182|ref|ZP_04126276.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228794416|gb|EEM41928.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 428

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C    +   G  V L GWV ++R  G + FL +RD  G+ Q V     A ++
Sbjct: 1   MKRSLTKEC----MEQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENGLAGYK 56

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++ +
Sbjct: 57  ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEILIENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +    +    L+I
Sbjct: 224 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 262



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+  E    +F      F+ G PPHGG   
Sbjct: 343 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV  LL   NVRE S FP
Sbjct: 399 GLERIVYKLLELTNVREASAFP 420


>gi|229161185|ref|ZP_04289172.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228622281|gb|EEK79120.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 432

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 124/266 (46%), Gaps = 21/266 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C +      G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 5   MKRSLTRECTE----HSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
           +      E V+ + G ++  S   +        +E+ A ++++L+ AE LP  +  ++ +
Sbjct: 61  L----EMESVVQVIGEIVETSKTEVG-------VEVLAHEVKVLNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-AR 178
                    R L LR +        +  +  S    +   +F    TP + +   EG A 
Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKATLAQSFSEYLTENDFTRIFTPKIVSQGAEGGAN 169

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F VP    +     L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD
Sbjct: 170 VFKVPYFQKEA---YLAQSPQFYKQMMVAGGLERVFEIAPVYRAEQHNSSRHLNEYISLD 226

Query: 239 MEMSFVEQ-DDILNTMENVLRGVFEE 263
           +E+ F+    +++    +VLR +F++
Sbjct: 227 VEIGFINDFHEVMQLETDVLRHMFQQ 252



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H   ++L +F+  G+  E    +F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHDYNMLLTSFNEKGLHSE----KFQSYVDTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V  LL   NVRE S FP
Sbjct: 403 GLERVVYKLLQLSNVREASAFP 424


>gi|229190299|ref|ZP_04317300.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228593083|gb|EEK50901.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 432

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 5   MKRSLTKEC----TKQNGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G ++  S   +        +E+ A ++ +++ AE LP  +  ++ +
Sbjct: 61  ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVNVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V  LL   NVRE S FP
Sbjct: 403 GLERVVYKLLELTNVREASAFP 424


>gi|68485621|ref|XP_713293.1| probable aspartate-tRNA synthetase [Candida albicans SC5314]
 gi|68485724|ref|XP_713240.1| probable aspartate-tRNA synthetase [Candida albicans SC5314]
 gi|46434721|gb|EAK94123.1| probable aspartate-tRNA synthetase [Candida albicans SC5314]
 gi|46434775|gb|EAK94176.1| probable aspartate-tRNA synthetase [Candida albicans SC5314]
          Length = 578

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 131/280 (46%), Gaps = 28/280 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSACFEIAK---- 63
           DL V++ G  V     VH+ R  G  ++FL +R    + Q +   N D+    ++K    
Sbjct: 117 DLSVANDGETVTFRARVHKTRQQGATMVFLTLRQQSELIQALLKTNKDTDATAVSKQMVK 176

Query: 64  ---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPV----F 115
              S+  E ++ ++G V ++  E I +  +   +E+   KI  I    E+LPL +     
Sbjct: 177 WTGSINLESIVLVEGKV-AKVEEKIKSATVQ-DVEILISKIYTIQETPEQLPLLIEDASR 234

Query: 116 GEREYPE--------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
            E+E  E          R   R +DLR  T       ++ +    R  +I + F E  TP
Sbjct: 235 SEKESEELGLPGVNLDTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLIKKGFTEIHTP 294

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            +  ++ EG  +    +     +F A  Q+PQ YKQ L+A+ F++ F+IAP FR E+  +
Sbjct: 295 KIIGAASEGGSNVFEINYFKGSAFLA--QSPQLYKQQLIAADFEKVFEIAPVFRAENSNT 352

Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
            R   EF  LD+EM+F +  D++L  +E +   +F E   
Sbjct: 353 HRHMTEFTGLDLEMAFEQHYDEVLEVLEELFVFIFTELKT 392



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H  +++ Q      +   V          AF  G PPH G   
Sbjct: 491 YDFFMRGEEILSGAQRIHDPKLLTQRMKEHEVDPNV--PGLNDYVEAFTYGCPPHAGGGI 548

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM  L  KN+R  SLFP
Sbjct: 549 GLERVVMFFLDLKNIRRASLFP 570


>gi|28493721|ref|NP_787882.1| aspartyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|28476763|gb|AAO44851.1| aspartyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 446

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 19/243 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V++ GWV  VR    I F+ IRD  G       V +  S C  IA+ + S   L I   V
Sbjct: 32  VQVRGWVEAVRDQKNIQFVIIRDESGAPLQLLYVRSGKSDC--IAEKISS---LSIGSFV 86

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +      N  +    +E+    ++++S A  LP P+  +    +  R  +RFLDLR + 
Sbjct: 87  RASGVLKHNERVKLRGLEVEINNLDVVSTA--LPSPIAHDSSIDK--RLDWRFLDLRNE- 141

Query: 138 LHKNIVKR--TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              N++ R  T  ++++R   +   FIE +TP L ASS E   +       ++  +  L 
Sbjct: 142 -RNNLIFRIQTYFLHALRTWWVRNGFIEINTPKLMASSSESRAELFSLKYFDRIGY--LA 198

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTME 254
           Q+PQ +KQ+  A+GF + F+IAP +R +   + R   E+  +D E+S++E  +D++N  E
Sbjct: 199 QSPQFFKQMSQAAGFGKVFEIAPVYRADPSFTSRHATEYTSIDSELSWIESHEDVMNMQE 258

Query: 255 NVL 257
            +L
Sbjct: 259 ELL 261



 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+  G EIA+G  R H  +V++      G+      +  G     F+ GMPPHGG  A
Sbjct: 361 YDLLFRGIEIATGAQREHRYDVLVDQAREKGLDL----SELGYYLDFFRYGMPPHGGFGA 416

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G+ RI+M LL   +++E +  
Sbjct: 417 GLARIIMALLRLGSIKESTFL 437


>gi|297526525|ref|YP_003668549.1| aspartyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255441|gb|ADI31650.1| aspartyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 443

 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 134/289 (46%), Gaps = 33/289 (11%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVL 71
           D+G  +R+ GW+ R++  G ++ +++  +  +   V     N +   FE AK +     L
Sbjct: 23  DIG--LRICGWIIRLKIVGKVVIIEVSGNTSVKPYVLVLKKNREPELFEKAKKLSIGTAL 80

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYR 129
           C +G              I  ++E+ ++ +E        PLPV    + P  +  R KYR
Sbjct: 81  CFEGEKSPVQKSKRGVEYIVRKLEIYSEPLE--------PLPVDTVGKVPALLDTRIKYR 132

Query: 130 FLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           +L L R+ + K + + R  II + R       FIE  TP + A+  EG    L P +   
Sbjct: 133 YL-LVRNPVEKAVFRIRAGIIEAARQYFNNNGFIEIHTPKIVAAGAEGGAT-LFPIQYFD 190

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-D 247
              Y L Q+PQ YKQ+L+A GF R F+I P FR E   + R   E + +D E  F+   +
Sbjct: 191 NKAY-LSQSPQLYKQMLIA-GFPRVFEITPYFRAEKFNTTRHLNESWGIDAEQGFINGVE 248

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           D+LNT+E+++              N+++R  Y +     GT+   L  P
Sbjct: 249 DVLNTLEDLI-----------VYINDYIRKNYVEEQEILGTEIEKLEKP 286



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 4/82 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           ++DL   G EIASGG R H  + ++ A  + G++ E     F     AF+ GMPPHGG  
Sbjct: 357 KFDLDYKGLEIASGGQREHRYDKLVSALKDKGLNPE----DFAFYLEAFKYGMPPHGGFG 412

Query: 541 AGIDRIVMLLLGAKNVREVSLF 562
            GI+R++M +LG +N+RE  LF
Sbjct: 413 LGIERLMMKMLGLENIREAILF 434


>gi|238879778|gb|EEQ43416.1| aspartyl-tRNA synthetase [Candida albicans WO-1]
          Length = 578

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 131/280 (46%), Gaps = 28/280 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSACFEIAK---- 63
           DL V++ G  V     VH+ R  G  ++FL +R    + Q +   N D+    ++K    
Sbjct: 117 DLSVANDGETVTFRARVHKTRQQGATMVFLTLRQQSELIQALLKTNKDTDSTAVSKQMVK 176

Query: 64  ---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPV----F 115
              S+  E ++ ++G V ++  E I +  +   +E+   KI  I    E+LPL +     
Sbjct: 177 WTGSINLESIVLVEGKV-AKVEEKIKSATVQ-DVEILISKIYTIQETPEQLPLLIEDASR 234

Query: 116 GEREYPE--------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
            E+E  E          R   R +DLR  T       ++ +    R  +I + F E  TP
Sbjct: 235 SEKESEELGLPGVNLDTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLIKKGFTEIHTP 294

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            +  ++ EG  +    +     +F A  Q+PQ YKQ L+A+ F++ F+IAP FR E+  +
Sbjct: 295 KIIGAASEGGSNVFEINYFKGSAFLA--QSPQLYKQQLIAADFEKVFEIAPVFRAENSNT 352

Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
            R   EF  LD+EM+F +  D++L  +E +   +F E   
Sbjct: 353 HRHMTEFTGLDLEMAFEQHYDEVLEVLEELFVFIFTELKT 392



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H  +++ Q      +   V          AF  G PPH G   
Sbjct: 491 YDFFMRGEEILSGAQRIHDPKLLTQRMKEHEVDPNV--PGLNDYVEAFTYGCPPHAGGGI 548

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM  L  KN+R  SLFP
Sbjct: 549 GLERVVMFFLDLKNIRRASLFP 570


>gi|126465208|ref|YP_001040317.1| aspartyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126014031|gb|ABN69409.1| aspartyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 418

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 31/284 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVLCIDGL 76
           +R+ GW+ R++  G ++ +++  +  +   V     N +   +E AK +     LC +G 
Sbjct: 1   MRICGWIIRLKIVGKVVIIEVSGNTSVKPYVLVLKKNREPELYEEAKKLSVGTALCFEGE 60

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLDLR 134
                        I  ++++ ++ +E        PLPV    + P  +  R KYR+L L 
Sbjct: 61  KSPVQKSKRGVEYIVKKLKIYSKPLE--------PLPVDTVGKVPALLDTRIKYRYL-LV 111

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R+ + K I + R  II + R       FIE  TP + A+  EG    L P +  +   Y 
Sbjct: 112 RNPVEKAIFRIRAGIIEAARQYFNNNGFIEIHTPKIVAAGAEGGAT-LFPVQYFENKAY- 169

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNT 252
           L Q+PQ YKQ+L+A GF R F+I P FR E   + R   E + +D E  F++  +D+LNT
Sbjct: 170 LSQSPQLYKQMLIA-GFPRVFEITPYFRAEKFNTTRHLNESWGIDAEQGFIDSVEDVLNT 228

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +E+++              NN++R  Y +     G +   L  P
Sbjct: 229 LEDLI-----------VYINNYIRKNYVEEQETLGIEIEKLDKP 261



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 4/82 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           ++DL   G EIASGG R H  + ++ A  + G++ E     F     AF+ GMPPHGG  
Sbjct: 332 KFDLDYKGLEIASGGQREHRYDKLVSALKDKGLNPE----DFAFYLEAFKYGMPPHGGFG 387

Query: 541 AGIDRIVMLLLGAKNVREVSLF 562
            GI+R++M +LG +N+RE  LF
Sbjct: 388 LGIERLMMKMLGLENIREAILF 409


>gi|229069744|ref|ZP_04203029.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228713365|gb|EEL65255.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 432

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 5   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++ +
Sbjct: 61  ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++  G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVTGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V  LL   NVRE S FP
Sbjct: 403 GLERVVYKLLELTNVREASAFP 424


>gi|240849241|ref|NP_001155359.1| aspartyl-tRNA synthetase, cytoplasmic [Ovis aries]
 gi|238799810|gb|ACR55777.1| aspartyl-tRNA synthetase [Ovis aries]
          Length = 501

 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 160/358 (44%), Gaps = 47/358 (13%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SV 65
            DL V   G  V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++
Sbjct: 49  SDLTVQKAGEVVWVRARVHASRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANI 108

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFG 116
             E ++ ++G+V  R       +     +EL  QK+ ++S AE  LPL         V G
Sbjct: 109 NKESIVDVEGVV--RKVNQKIGSCTQQDVELRVQKVYVISSAEPRLPLQLDDAVRPEVEG 166

Query: 117 EREYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
           E E   ++    R   R +DLR  T       ++ I +  R  +  + F+E  TP + ++
Sbjct: 167 EEEGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLTNKGFVEIQTPKIISA 226

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   
Sbjct: 227 ASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLT 284

Query: 233 EFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------L 275
           EF  LD+EM+F        ++I +T+  + +G+ + F      V+  F           L
Sbjct: 285 EFVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQMVNKQFPCEPFKFLEPTL 344

Query: 276 RICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           R+ Y +A   +R  G    D+ DL  P   ++  + +    ++F +  K  L+V P Y
Sbjct: 345 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|126460722|ref|YP_001057000.1| aspartyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126250443|gb|ABO09534.1| aspartyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 428

 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 127/262 (48%), Gaps = 16/262 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           + H   D+     G+ V ++GWV  +R  G + FL +RD  G  QV          + K 
Sbjct: 4   KLHWTSDVTPEKHGAEVVVAGWVWELRDLGRVKFLVVRDREGFVQVTLKAGKTPEHLLKM 63

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
              +  E V+ + G+V +       + I    +E+   +I +L+ A+ LPL ++ E   P
Sbjct: 64  FGELNREDVVLVRGVVEA-------SKIAKSGVEIFPSEITVLNKAKPLPLDIWSES--P 114

Query: 122 E-SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           + + R ++R +DL+R          + ++ ++R  +  E F+E  TP +  +S EG  + 
Sbjct: 115 DLATRLRWRSVDLKRPRNLAIFSFASDVLKAIRGVLYEEKFVEVFTPKIIVTSTEGGAE- 173

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           L P    +   Y L Q+PQ YK+ L AS  +R F+I P +R E   +D    EF  +D E
Sbjct: 174 LFPVLYFERVAY-LSQSPQLYKEQLTAS-LERVFEIGPAYRAEKHNTDFHLNEFISVDAE 231

Query: 241 MSFVEQDDILNTMENVLRGVFE 262
            +F+   DI+  +E ++  + E
Sbjct: 232 AAFMNYWDIMGLLEKIVHRLAE 253



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+ NG EIASG  R H  + + +     G+   + E+        F  GMPPH G   
Sbjct: 343 YDLIINGLEIASGATRIHRRDELEEEMRRRGLDPRLFESHLS----VFDYGMPPHAGFGL 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R+V  LL   NVR  +L+P
Sbjct: 399 GFNRLVTALLNLDNVRHATLYP 420


>gi|309799292|ref|ZP_07693539.1| aspartyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308117070|gb|EFO54499.1| aspartyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 141

 Score = 95.5 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 5/141 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+   
Sbjct: 3   RSMYAGRVREEHIGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMAT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGQVAAR--EQANDKLATGAVELNVTALSVLNTAKTTPFEIKDGIEAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNI 142
           +  R +YR+LDLRR  + +N+
Sbjct: 121 DDTRLRYRYLDLRRPEMLENL 141


>gi|228920928|ref|ZP_04084266.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228838717|gb|EEM84020.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 432

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 5   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E ++ + G ++  S   +        +E+ A ++++++ AE LP  +  ++ +
Sbjct: 61  ----VDVESIVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKSTLVQSFSEVLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQREAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEKELQLLQI 266



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+  E    +F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNHEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V  LL   NVRE S FP
Sbjct: 403 GLERVVYKLLELTNVREASAFP 424


>gi|229172913|ref|ZP_04300466.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228610536|gb|EEK67805.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 428

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C + G    G  V L GWV ++R  G I FL IRD  G+ Q V   + A ++
Sbjct: 1   MKRSLTKECTEQG----GKVVLLQGWVKKIRHLGNISFLLIRDRSGVMQCVLENELAGYK 56

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
           +      + V    G ++  S   +        +E+ A  ++IL+ AE LP  +  ++ +
Sbjct: 57  VDVESVVQVV----GQIVETSKTELG-------VEVLAHDVKILNRAEPLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVLSLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F++AP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEVAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 224 ELGFIHDFYEVMQLETDVLRYMFQQVAKNCEKELQLLQI 262



 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  +++L +F   G+  +     F      F+ G PPHGG   
Sbjct: 343 FDLLYKGLEITSGAQRIHNYDLLLASFKEKGLHPDT----FQSYLNTFRYGCPPHGGFGI 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V  LL   NVRE S FP
Sbjct: 399 GLERVVYKLLELTNVREASAFP 420


>gi|324326233|gb|ADY21493.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 428

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL IRD  G+ Q V   + A F+
Sbjct: 1   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLIRDRSGVMQCVLENELAGFK 56

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
           +      + V    G ++  S   +        IE+ A +++IL+ AE LP  +  ++ +
Sbjct: 57  VDVESVVQVV----GQIVETSKTELG-------IEVLAHEVKILNGAEPLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVLSLRHERTAAIFKVKSTLVQSFSKFLIENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERAFEIAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 224 EIGFINDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 262



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ G PPHGG   
Sbjct: 343 FDLLYKGLEITSGAQRIHNYEMLLTSFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V   L   NVRE S FP
Sbjct: 399 GLERVVYKFLELSNVREASAFP 420


>gi|311272131|ref|XP_003133314.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like [Sus scrofa]
          Length = 501

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 159/358 (44%), Gaps = 47/358 (13%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SV 65
            DL V      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++
Sbjct: 49  SDLTVQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANI 108

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFG 116
             E ++ ++G+V  R       +     +EL  QKI ++S AE  LPL         V G
Sbjct: 109 NKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISSAEPRLPLQLDDAVRPEVEG 166

Query: 117 EREYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
           E E   ++    R   R +DLR  T       ++ I +  R  +I + F+E  TP + ++
Sbjct: 167 EEEGRATVNQDTRLDNRIIDLRTSTSQAVFRLQSGICHLFRENLINKGFVEIQTPKIISA 226

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   
Sbjct: 227 ASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLT 284

Query: 233 EFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------L 275
           EF  +D+EM F        ++I +T+  + +G+ E F      V+  F           L
Sbjct: 285 EFVGMDIEMVFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQMVNKQFPCEPFKFLEPTL 344

Query: 276 RICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           R+ Y +A   +R  G    D+ DL  P   ++  + +    ++F +  K  L+V P Y
Sbjct: 345 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|55741590|ref|NP_001006528.1| aspartyl-tRNA synthetase, cytoplasmic [Gallus gallus]
 gi|53133418|emb|CAG32038.1| hypothetical protein RCJMB04_16g5 [Gallus gallus]
          Length = 503

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 47/347 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSEWVLCIDGL 76
           V + G VH  R  G   FL +R   + I  +VA    A  ++ K   ++  E ++ ++G+
Sbjct: 62  VWVRGRVHTSRAKGKQCFLVLRQQQFNIQALVAVGQHASKQMVKFAANINKESIVDVEGV 121

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGEREYPESI--- 124
           V  R A           +EL  Q+I ++S+AE  LPL         V GE +   ++   
Sbjct: 122 V--RKAHQKIGGCTQQDVELHVQRIYVISLAEPRLPLQLDDAVRPEVEGEEDGRATVNQD 179

Query: 125 -RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R   R +DLR  T       ++ I    R  +I + F+E  TP + +++ EG  +    
Sbjct: 180 TRLDNRVIDLRTSTSQAVFCLQSGICQLFRETLIRKGFVEIQTPKIISAASEGGANVFTV 239

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           S     ++ A  Q+PQ YKQ+ + + F++ F + P FR ED  + R   EF  LD+EM+F
Sbjct: 240 SYFKSSAYLA--QSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHLTEFVGLDIEMAF 297

Query: 244 VEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNF-----------LRICYDDAI--- 283
                   D+I +T+  + +G+ E F +    V+  F           LR+ Y +A+   
Sbjct: 298 NYHYHEVVDEIADTLVQIFKGLQERFQAEIQMVNKQFPCEPFKFLEPTLRLEYREAVAML 357

Query: 284 RRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           R  G    D+ DL  P   ++  + +    ++F +  K  L+V P Y
Sbjct: 358 REAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 404



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 418 YDMFMRGEEILSGAQRIHDPQLLTERAKHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 473

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 474 GLERVTMLYLGLHNVRQTSMFP 495


>gi|317056541|ref|YP_004105008.1| tRNA synthetase class II (D K and N) [Ruminococcus albus 7]
 gi|315448810|gb|ADU22374.1| tRNA synthetase class II (D K and N) [Ruminococcus albus 7]
          Length = 444

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 124/255 (48%), Gaps = 20/255 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCID 74
           +G  +++ G+V   R    + F+ I+D  G  QV    +      +   ++  + V+ + 
Sbjct: 13  LGESIKVQGFVENYRNARAMAFIVIKDITGKLQVTVEKEKHPELNDKLDALTGDSVVTVI 72

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-----VFGEREYPE--SI--R 125
           G V        N  +  G +E+  + I   S+A+ +P+         +++  E  SI  R
Sbjct: 73  GQVFE------NDYVKLGGLEMIPEDIIPESIADAIPIARKEIAATKKKKAVERSSIDQR 126

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             YR++DLR D        +T ++N+MR  ++ ENFIE  TP L  ++ E          
Sbjct: 127 IDYRWIDLRTDENQLMFKAQTVLVNAMRQFLLGENFIEIHTPKLIGAASESGSSVFEVKY 186

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV- 244
            ++ ++  L Q+PQ YKQ+ MASGF+R F++ P FR E   + +   EF   D+E S++ 
Sbjct: 187 FDRNAY--LAQSPQFYKQMAMASGFERIFEVGPVFRAEKSYTSKHTTEFTGFDLEFSYIN 244

Query: 245 EQDDILNTMENVLRG 259
           +  D++   E +L+ 
Sbjct: 245 DYRDVMAMEEQLLKA 259



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 5/71 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+  G EI +G  R H  EV+ +  +  G+ ++V   +F      F+ G PPHGG   
Sbjct: 361 YDLIWRGVEITTGAQREHRYEVLKKQAAEKGLDEDV---KF--YLEFFKYGCPPHGGFGI 415

Query: 542 GIDRIVMLLLG 552
           G+DR+ MLLLG
Sbjct: 416 GVDRLTMLLLG 426


>gi|82751053|ref|YP_416794.1| asparaginyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123754652|sp|Q2YY52|SYN_STAAB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|82656584|emb|CAI81007.1| asparaginyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 430

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 122/282 (43%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L + G +
Sbjct: 16  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++S A + P+     + +       +R L LR   
Sbjct: 76  TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  +I +       + F +   PILTAS+PEG  +  +    +Q +F  L Q+
Sbjct: 126 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFLTKYFDQDAF--LSQS 183

Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254
            Q Y +   MA G  + F   P FR E  ++ R   EF+ ++ EM+F    + L   E  
Sbjct: 184 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 241

Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
             +V++ V E           + S    V+  F RI YDDAI
Sbjct: 242 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 283


>gi|28572907|ref|NP_789687.1| aspartyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|28411040|emb|CAD67425.1| aspartyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 432

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 19/243 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V++ GWV  VR    I F+ IRD  G       V +  S C  IA+ + S   L I   V
Sbjct: 18  VQVRGWVEAVRDQKNIQFVIIRDESGAPLQLLYVRSGKSDC--IAEKISS---LSIGSFV 72

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +      N  +    +E+    ++++S A  LP P+  +    +  R  +RFLDLR + 
Sbjct: 73  RASGVLKHNERVKLRGLEVEINNLDVVSTA--LPSPIAHDSSIDK--RLDWRFLDLRNE- 127

Query: 138 LHKNIVKR--TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              N++ R  T  ++++R   +   FIE +TP L ASS E   +       ++  +  L 
Sbjct: 128 -RNNLIFRIQTCFLHALRTWWVRNGFIEINTPKLMASSSESRAELFSLKYFDRIGY--LA 184

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTME 254
           Q+PQ +KQ+  A+GF + F+IAP +R +   + R   E+  +D E+S++E  +D++N  E
Sbjct: 185 QSPQFFKQMSQAAGFGKVFEIAPVYRADPSFTSRHATEYTSIDSELSWIESHEDVMNMQE 244

Query: 255 NVL 257
            +L
Sbjct: 245 ELL 247



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+  G EIA+G  R H  +V++      G+      +  G     F+ GMPPHGG  A
Sbjct: 347 YDLLFRGIEIATGAQREHRYDVLVDQAREKGLDL----SELGYYLDFFRYGMPPHGGFGA 402

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G+ RI+M LL   +++E +  
Sbjct: 403 GLARIIMALLRLGSIKESTFL 423


>gi|116491117|ref|YP_810661.1| asparaginyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|122276701|sp|Q04EX6|SYN_OENOB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116091842|gb|ABJ56996.1| asparaginyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 434

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 123/287 (42%), Gaps = 32/287 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V++  W+ + R  G I FL +RD  G  Q    V + D A F++A+ ++ E    +
Sbjct: 16  VGQTVKIGVWLRQKRGSGKIAFLQLRDGTGFMQGVVSVGDVDEATFKLAEHLKQESSFYV 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   S             E++   IEI+  +E+ P+     +E+     F  R L L
Sbjct: 76  TGEIHQDSRSEFG-------FEMAVSDIEIVGESEDYPIT---PKEHGTDFLFDERHLYL 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  II ++      + F++  +PI+T S+PEG  +       ++ ++  
Sbjct: 126 RHQKPFATMKIRDEIIRAIYDFFHKDGFLKLDSPIITDSAPEGTTELFPVKYFDKDAY-- 183

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +   A  F + +   P FR E   + R   EF+ +D EM+++ Q+D L   
Sbjct: 184 LSQTGQLYAEA-GAMAFGKVYDFGPTFRAEKSSTRRHLTEFWMIDAEMAWMHQEDSLKVQ 242

Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIR 284
           E  +  + E   +   V    L                RI YDDA++
Sbjct: 243 ERFIAYLIERVVDNCQVELKMLGRDVEKLRAYTKLPYPRISYDDAVK 289


>gi|228900806|ref|ZP_04065021.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL
           4222]
 gi|228858732|gb|EEN03177.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL
           4222]
          Length = 419

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 125/262 (47%), Gaps = 15/262 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V L GWV ++R  G + FL +RD  G+ Q V     A ++    V  E V+ + G +
Sbjct: 5   GKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENGLAGYK----VDVESVVHVIGEI 60

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRD 136
           +  S   +        +E+ A ++++++ AE LP  +  ++ +         R + LR +
Sbjct: 61  VETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQVGLDQLLNERVISLRHE 113

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                   ++ ++ S    +I  +F    TP + +   EG  +        + ++  L Q
Sbjct: 114 RTAAIFKVKSTLVQSFSEILIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAY--LAQ 171

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMEN 255
           +PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+E+ F+    +++    +
Sbjct: 172 SPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYEVMQLETD 231

Query: 256 VLRGVFEEFSNGNTVSNNFLRI 277
           VLR +F++ +    +    L+I
Sbjct: 232 VLRYMFQQVAKKCEIELQLLQI 253



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+  E    +F      F+ G PPHGG   
Sbjct: 334 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 389

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV  LL   NVRE S FP
Sbjct: 390 GLERIVYKLLELTNVREASAFP 411


>gi|302874889|ref|YP_003843522.1| aspartyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307690494|ref|ZP_07632940.1| aspartyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302577746|gb|ADL51758.1| aspartyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 429

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 19/256 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT+ C     ++V   V+  GWVH++   G I F+ +RD  GI Q++ +      E +K 
Sbjct: 3   RTYVCDIEKKAEVNILVK--GWVHKIHDLGQISFVHLRDKTGIVQLILDK-----ETSKD 55

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL--SVAEELPLPVFGEREYPE 122
           ++ E  + + G       +T+      G IE+    I+++  +  E LP+ V   ++   
Sbjct: 56  LKLEMAIEVCG-------KTVLNEKAPGGIEVLPDDIKVVGKTFYETLPIEVNAYKQKAS 108

Query: 123 -SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              +   R L L+          +  I N+ R  + A+ F E  TP + +SS EG  +  
Sbjct: 109 LEKQLDNRCLSLKAPKTRAIFKVQEEIANAFRNFLTAQRFSEVRTPKIISSSTEGGSEMF 168

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + +F  L Q+PQ YKQ+++ +GF+R F+I   +R E   + R   E+  LD+EM
Sbjct: 169 TVDYFGRRAF--LTQSPQFYKQMMVGAGFERVFEIGFAYRAELHNTWRHLNEYVSLDVEM 226

Query: 242 SFVEQDDILNTMENVL 257
            F+E ++ L  +E  L
Sbjct: 227 GFIEDENELMDLEEAL 242



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI +GG R +  E++ +      ++     + F      F+ GMPPHGG A 
Sbjct: 344 FDLIFKGLEITTGGQRINDYEMLKENIKKFKLNP----DDFAFYLDNFKYGMPPHGGFAI 399

Query: 542 GIDRIVMLLLGAKNVREVSL 561
           G++RI + +L   N+RE +L
Sbjct: 400 GLERITLKILNLDNIREATL 419


>gi|49486294|ref|YP_043515.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|59798533|sp|Q6G9A8|SYN_STAAS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|49244737|emb|CAG43173.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MSSA476]
          Length = 430

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 122/282 (43%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L + G +
Sbjct: 16  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++S A + P+     + +       +R L LR   
Sbjct: 76  TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +F  L Q+
Sbjct: 126 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183

Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254
            Q Y +   MA G  + F   P FR E  ++ R   EF+ ++ EM+F+   + L   E  
Sbjct: 184 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFINHAESLEIQEQY 241

Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
             +V++ V E           + S    V+  F RI YDDAI
Sbjct: 242 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 283


>gi|47094549|ref|ZP_00232210.1| OB-fold nucleic acid binding domain protein [Listeria monocytogenes
           str. 4b H7858]
 gi|47017075|gb|EAL07947.1| OB-fold nucleic acid binding domain protein [Listeria monocytogenes
           str. 4b H7858]
          Length = 121

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 48/110 (43%), Positives = 70/110 (63%), Gaps = 2/110 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
            SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P 
Sbjct: 64  DSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNSSKTPPF 113


>gi|328480062|gb|EGF49060.1| aspartyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 157

 Score = 94.0 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 2/144 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT   GD+    +   V L GWV + R  G +IF+D+RD  GI Q+V +   D     +A
Sbjct: 4   RTCYAGDVNTDYLDQEVTLKGWVQKRRSLGSLIFIDLRDREGIVQLVFSDAIDRDALTVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVRSE+V+ + G+V  R  + +N  + TG IE+    I IL+ A+  P  +       E
Sbjct: 64  NSVRSEYVVEVQGVVKKRKPQAVNPEMKTGDIEVEVHDITILNKAKTPPFYIEDNVAVTE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRT 146
             + +YR+LDLRR  + +    R+
Sbjct: 124 ETKLRYRYLDLRRPEMQRTFYPRS 147


>gi|14520441|ref|NP_125916.1| asparaginyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|20139961|sp|Q9V251|SYN_PYRAB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|5457656|emb|CAB49147.1| asnS asparaginyl-tRNA synthetase (EC 6.1.1.22) (asparagine--tRNA
           ligase) (ASNRS) [Pyrococcus abyssi GE5]
          Length = 434

 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 132/293 (45%), Gaps = 29/293 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSV 65
           C D+     G  V+L+GWV+     G  IFL IRD  GI Q V   +      FE AK +
Sbjct: 7   CQDIKPELDGKRVKLAGWVYSNMRVGKKIFLWIRDSTGIIQTVIAKNVVGEDVFETAKKL 66

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + ++G+V +            G  E+  +K++++    E P+P   E+  PE + 
Sbjct: 67  GRESSVIVEGIVKADER-------APGGAEVHVEKLKVIQAVSEFPIPENPEQASPELL- 118

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             YR L +R   +   +  +  +I + R  ++ E + E   PIL   + EG         
Sbjct: 119 LDYRHLHIRSPKVSAIMRVKETLIMAAREWLLREGWHEVFPPILVTGAVEGGATLFKLKY 178

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ ++  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E ++++
Sbjct: 179 FDKVAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD 235

Query: 246 QDDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283
             DI+   E ++           +   E F +  T   N    F RI YD+AI
Sbjct: 236 LWDIMKVEEELVSYMVQRTLELRKKEIEMFRDDLTTLKNTEPPFPRISYDEAI 288


>gi|213400771|gb|ACJ47034.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Folsomia
           candida]
          Length = 134

 Score = 94.0 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 58/138 (42%), Positives = 82/138 (59%), Gaps = 8/138 (5%)

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           ++  NF RI Y +A+ +YG+DKPDLRNP+++ +VTE F  SEF +F K  +V  G  V A
Sbjct: 3   SIEKNFPRITYKEAMLKYGSDKPDLRNPLLISDVTEIFRDSEFNIFKK--NVECGMVVRA 60

Query: 329 IPA-KGGGGNRAFCDRMNEWARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386
           IPA K     R+F D+  E A+ + G  GL YI    D+ G  +  GP+AK L+      
Sbjct: 61  IPAPKTAKEPRSFFDKKIEHAQKEFGAKGLGYI--TFDDDG--SAKGPIAKFLDENRLNQ 116

Query: 387 IRVRLDMQDGDSCFFIAG 404
           IR   +++ GDS FF +G
Sbjct: 117 IREMTNIKPGDSVFFTSG 134


>gi|150016995|ref|YP_001309249.1| aspartyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149903460|gb|ABR34293.1| aspartyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 429

 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 17/258 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           DL V+   + V L GWVH++R    + F+ +RD  GI Q+V   +       K +R E  
Sbjct: 8   DLAVNGEET-VLLKGWVHKIRDLSHVSFILLRDKSGIIQLVCTKEQI-----KGLRLENA 61

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGEREYPESIRFKY 128
           + + G+V  R  E     +   +IE+S  KI      ++LP  +  F E+   E+ +  Y
Sbjct: 62  VEVTGIV--RENEKAPKGM---EIEVSDIKIAGTVYYDKLPFEIQSFKEKAALET-QLDY 115

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R + LR          +  I  + R      +F E  TP +T S  EG  +    +  N+
Sbjct: 116 RTISLRIPKKKAIFKVQNEIEEAFRMFFKGNDFEEIHTPKITHSGTEGGSEMFTVNYFNR 175

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQD 247
            +F  L Q+PQ +KQ+++ +GF+R F++   +R E   + R   E+  LD+EM F+ ++ 
Sbjct: 176 RAF--LAQSPQFWKQMMVGAGFERVFEVGYAYRAELHNTWRHLNEYVSLDVEMGFIKDET 233

Query: 248 DILNTMENVLRGVFEEFS 265
           D++   EN +R +++  +
Sbjct: 234 DLMEMEENFIRYLYKHLN 251



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI +GG R H  E++      +G+  E     F      F+ GMPPHGG A 
Sbjct: 344 FDLIFKGVEITTGGQRIHDYEMLKAKMERLGLKLE----DFAFYLDTFKYGMPPHGGFAI 399

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RI M +L   N+RE SLFP
Sbjct: 400 GLERITMQILNLGNIREASLFP 421


>gi|163939992|ref|YP_001644876.1| aspartyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163862189|gb|ABY43248.1| aspartyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 432

 Score = 94.0 bits (232), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 122/267 (45%), Gaps = 23/267 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C + G    G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 5   MKRSLTRECTEHG----GKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
           +                     E +  +     +E+ A ++++L+ AE LP  +  ++ +
Sbjct: 61  VDVESVV-----------QVVGEIVETSKTELGVEVLAHEVKVLNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKSTLVQSFGEFLIENDFTRVFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++  L Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAY--LAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQDDILNTME---NVLRGVFEE 263
           E+ F+  +D    M+   +VLR +F++
Sbjct: 228 ELGFI--NDFYEVMQLETDVLRYMFQQ 252



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 13/105 (12%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +TMP    E++  +         +DL+  G EI SG  R H  E++L +F   G+     
Sbjct: 333 YTMPNKENEAITDS---------FDLLYKGLEITSGAQRIHNHEMLLASFKEKGLHP--- 380

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            ++F      F+ G PPHGG   G++R+V  LL   NVRE S FP
Sbjct: 381 -DKFQSYVNTFRYGCPPHGGFGIGLERVVYKLLELSNVREASAFP 424


>gi|241958322|ref|XP_002421880.1| aspartyl-tRNA synthetase, cytoplasmic, putative [Candida
           dubliniensis CD36]
 gi|223645225|emb|CAX39824.1| aspartyl-tRNA synthetase, cytoplasmic, putative [Candida
           dubliniensis CD36]
          Length = 578

 Score = 94.0 bits (232), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 130/280 (46%), Gaps = 28/280 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSACFEIAK---- 63
           DL V++ G  V     VH  R  G  ++FL +R    + Q +   N D+    ++K    
Sbjct: 117 DLSVANDGETVIFRARVHNTRQQGATMVFLTLRQQSELIQALLKTNKDTDSTAVSKQMVK 176

Query: 64  ---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPV----F 115
              SV  E ++ ++G V ++  E I +  +   +E+   KI  I    E+LPL +     
Sbjct: 177 WTGSVNLESIVLVEGKV-AKVEEKIKSATVQ-DVEILISKIYTIQETPEQLPLLIEDASR 234

Query: 116 GEREYPE--------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
            E+E  E          R   R +DLR  T       ++ +    R  +I + F E  TP
Sbjct: 235 SEKESEELGLPGVNLDTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLIKKGFTEIHTP 294

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            +  ++ EG  +    +     +F A  Q+PQ YKQ L+A+ F++ F+IAP FR E+  +
Sbjct: 295 KIIGAASEGGSNVFEINYFKGSAFLA--QSPQLYKQQLIAADFEKVFEIAPVFRAENSNT 352

Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
            R   EF  LD+EM+F +  D++L  +E +   +F E   
Sbjct: 353 HRHMTEFTGLDLEMAFEQHYDEVLEVLEELFVFIFTELKT 392



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H  +++ Q      +   V          AF  G PPH G   
Sbjct: 491 YDFFMRGEEILSGAQRIHDPKLLTQRMKEHEVDPNV--PGLNDYVDAFTYGCPPHAGGGI 548

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM  L  KN+R  SLFP
Sbjct: 549 GLERVVMFFLDLKNIRRASLFP 570


>gi|217959728|ref|YP_002338280.1| aspartyl-tRNA synthetase [Bacillus cereus AH187]
 gi|217063033|gb|ACJ77283.1| aspartyl-tRNA synthetase [Bacillus cereus AH187]
          Length = 432

 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C   G    G  V L GWV ++R  G + FL IRD  G+ Q V   + A F+
Sbjct: 5   MKRSLTKECTKQG----GKVVLLQGWVKKIRHLGNVSFLLIRDRSGVMQCVLENELAGFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
           +      + V    G ++  S   +        IE+ A +++IL+ AE LP  +  ++ +
Sbjct: 61  VDVESVVQVV----GQIVETSKTELG-------IEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++  ++S    +   +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERIAAIFKVKSTFVHSFSEFLAENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VL+ +F++ +         L+I
Sbjct: 228 EIGFINDFHEVMQLETDVLQYMFQQVAKNCEKELQLLQI 266



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V  LL   NVRE S FP
Sbjct: 403 GLERVVCKLLELTNVREASAFP 424


>gi|22096193|sp|Q8U4D3|SYN_PYRFU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
          Length = 434

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 29/293 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSV 65
           C ++     G  V+L+GWV+     G  IFL IRD  GI Q V   +      FE AK +
Sbjct: 7   CSEVKPELEGKKVKLAGWVYSNMKVGKKIFLWIRDSTGIVQTVIAKNVVGEEVFEKAKKL 66

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + ++G+V +            G  E+  +K+E++    E P+P   E+  PE + 
Sbjct: 67  GRESSVIVEGIVKADER-------APGGAEVRVEKLEVIQAVSEFPIPENPEQASPELL- 118

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             YR L +R       +  +  +I + R  ++ + + E   PIL   + EG         
Sbjct: 119 LDYRHLHIRTPKASAIMKVKETLIMAAREWLLKDGWHEVFPPILVTGAVEGGATLFKLKY 178

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ ++  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E ++++
Sbjct: 179 FDKYAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD 235

Query: 246 QDDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283
             DI+   E ++           +   E F +  T   N    F RI YD+AI
Sbjct: 236 LWDIMKVEEELVSYMVQRTLELRKKEIEMFRDDLTTLKNTEPPFPRISYDEAI 288


>gi|253732096|ref|ZP_04866261.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733299|ref|ZP_04867464.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|304380964|ref|ZP_07363622.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|253724143|gb|EES92872.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728839|gb|EES97568.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|304340489|gb|EFM06425.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320142699|gb|EFW34502.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
          Length = 432

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L + G +
Sbjct: 18  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++S A + P+     + +       +R L LR   
Sbjct: 78  TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +F  L Q+
Sbjct: 128 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 185

Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254
            Q Y +   MA G  + F   P FR E  ++ R   EF+ ++ EM+F    + L   E  
Sbjct: 186 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 243

Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
             +V++ V E           + S    V+  F RI YDDAI
Sbjct: 244 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 285


>gi|329731349|gb|EGG67715.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 430

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L + G +
Sbjct: 16  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++S A + P+     + +       +R L LR   
Sbjct: 76  TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +F  L Q+
Sbjct: 126 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183

Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254
            Q Y +   MA G  + F   P FR E  ++ R   EF+ ++ EM+F    + L   E  
Sbjct: 184 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 241

Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
             +V++ V E           + S    V+  F RI YDDAI
Sbjct: 242 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 283


>gi|297207886|ref|ZP_06924319.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300911971|ref|ZP_07129414.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|296887460|gb|EFH26360.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300886217|gb|EFK81419.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 432

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L + G +
Sbjct: 18  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++S A + P+     + +       +R L LR   
Sbjct: 78  TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +F  L Q+
Sbjct: 128 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 185

Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254
            Q Y +   MA G  + F   P FR E  ++ R   EF+ ++ EM+F    + L   E  
Sbjct: 186 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 243

Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
             +V++ V E           + S    V+  F RI YDDAI
Sbjct: 244 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 285


>gi|18976527|ref|NP_577884.1| asparaginyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|18892078|gb|AAL80279.1| asparaginyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 437

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 29/293 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSV 65
           C ++     G  V+L+GWV+     G  IFL IRD  GI Q V   +      FE AK +
Sbjct: 10  CSEVKPELEGKKVKLAGWVYSNMKVGKKIFLWIRDSTGIVQTVIAKNVVGEEVFEKAKKL 69

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + ++G+V +            G  E+  +K+E++    E P+P   E+  PE + 
Sbjct: 70  GRESSVIVEGIVKADER-------APGGAEVRVEKLEVIQAVSEFPIPENPEQASPELL- 121

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             YR L +R       +  +  +I + R  ++ + + E   PIL   + EG         
Sbjct: 122 LDYRHLHIRTPKASAIMKVKETLIMAAREWLLKDGWHEVFPPILVTGAVEGGATLFKLKY 181

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ ++  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E ++++
Sbjct: 182 FDKYAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD 238

Query: 246 QDDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283
             DI+   E ++           +   E F +  T   N    F RI YD+AI
Sbjct: 239 LWDIMKVEEELVSYMVQRTLELRKKEIEMFRDDLTTLKNTEPPFPRISYDEAI 291


>gi|297591066|ref|ZP_06949704.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|297575952|gb|EFH94668.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312438141|gb|ADQ77212.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 432

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L + G +
Sbjct: 18  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++S A + P+     + +       +R L LR   
Sbjct: 78  TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +F  L Q+
Sbjct: 128 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 185

Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254
            Q Y +   MA G  + F   P FR E  ++ R   EF+ ++ EM+F    + L   E  
Sbjct: 186 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 243

Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
             +V++ V E           + S    V+  F RI YDDAI
Sbjct: 244 VTHVVKSVLENCKLELKMLERDTSKLEKVATPFPRISYDDAI 285


>gi|242398977|ref|YP_002994401.1| Asparaginyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242265370|gb|ACS90052.1| Asparaginyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 431

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 137/297 (46%), Gaps = 41/297 (13%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIAKSVR 66
           C D+     G  V+L+GWV+R R  G  +F+ +RD  GI Q +   D +   +E AK V 
Sbjct: 8   CMDVKPKMEGERVKLAGWVYRKREVGNKVFIVLRDSSGIIQTIFMKDLSEDAYEKAKQVG 67

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  + I+G V S      ++   TG +E+ A KIEIL   E  P+      E+      
Sbjct: 68  IESSVIIEGTVKS------DSRAPTG-VEIQADKIEILQNVEFFPITKDASDEF------ 114

Query: 127 KYRFLDLRRDTLHK----NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
               LD+R   LH     +++K +  ++ + R  ++ + + E   PIL   + EG     
Sbjct: 115 ---LLDVRHLHLHSPKVGSVMKVKGTLMQAAREWLLQDGWYEVFPPILVTGAVEGGATLF 171

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                ++ ++  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   E++ L++E 
Sbjct: 172 KLKYFDREAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEYWHLELEA 228

Query: 242 SFVEQDDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283
           ++++  D+L   E ++           +   EEF    T   N    F RI YD+AI
Sbjct: 229 AWMDLWDLLEVEEELVSYMVQRTLELRKKEIEEFRKDFTTLKNSEPPFPRISYDEAI 285


>gi|206975106|ref|ZP_03236020.1| aspartyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|229138920|ref|ZP_04267499.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|206746527|gb|EDZ57920.1| aspartyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|228644545|gb|EEL00798.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 428

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C   G    G  V L GWV ++R  G + FL IRD  G+ Q V   + A F+
Sbjct: 1   MKRSLTKECTKQG----GKVVLLQGWVKKIRHLGNVSFLLIRDRSGVMQCVLENELAGFK 56

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
           +      + V    G ++  S   +        IE+ A +++IL+ AE LP  +  ++ +
Sbjct: 57  VDVESVVQVV----GQIVETSKTELG-------IEVLAHEVKILNGAEPLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++  ++S    +   +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVLSLRHERIAAIFKVKSTFVHSFSEFLAENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VL+ +F++ +         L+I
Sbjct: 224 EIGFINDFHEVMQLETDVLQYMFQQVAKNCEKELQLLQI 262



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ G PPHGG   
Sbjct: 343 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V  LL   NVRE S FP
Sbjct: 399 GLERVVCKLLELTNVREASAFP 420


>gi|14590172|ref|NP_142237.1| asparaginyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|20139874|sp|O57980|SYN_PYRHO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|109156926|pdb|1X54|A Chain A, Crystal Structure Of Asparaginyl-Trna Synthetase From
           Pyrococcus Horikoshii Complexed With
           Asparaginyl-Adenylate
 gi|109156927|pdb|1X55|A Chain A, Crystal Structure Of Asparaginyl-Trna Synthetase From
           Pyrococcus Horikoshii Complexed With
           Asparaginyl-Adenylate Analogue
 gi|109156928|pdb|1X56|A Chain A, Crystal Structure Of Asparaginyl-Trna Synthetase From
           Pyrococcus Horikoshii
 gi|3256630|dbj|BAA29313.1| 434aa long hypothetical asparaginyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 434

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 131/293 (44%), Gaps = 29/293 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSV 65
           C ++     G  VRL+GWV+     G  IFL IRD  GI Q V   +      FE AK +
Sbjct: 7   CQEVKPELDGKKVRLAGWVYTNMRVGKKIFLWIRDSTGIVQAVVAKNVVGEETFEKAKKL 66

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + ++G+V +            G  E+  +K+E++    E P+P   E+  PE + 
Sbjct: 67  GRESSVIVEGIVKADER-------APGGAEVHVEKLEVIQAVSEFPIPENPEQASPELL- 118

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             YR L +R       +  +  +I + R  ++ + + E   PIL   + EG         
Sbjct: 119 LDYRHLHIRTPKASAIMKVKETLIMAAREWLLKDGWHEVFPPILVTGAVEGGATLFKLKY 178

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ ++  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E ++++
Sbjct: 179 FDKYAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD 235

Query: 246 QDDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283
             DI+   E ++           +   E F +  T   N    F RI YD+AI
Sbjct: 236 LWDIMKVEEELVSYMVQRTLELRKKEIEMFRDDLTTLKNTEPPFPRISYDEAI 288


>gi|229029921|ref|ZP_04185990.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228731429|gb|EEL82342.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 428

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL IRD  G+ Q V   + A F+
Sbjct: 1   MKRSLTKECK----KQSGKVVLLQGWVKKIRHLGNVSFLLIRDRSGVMQCVLENELAGFK 56

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
           +      + V    G ++  S   +        +E+ A +++IL+ AE LP  +  ++ +
Sbjct: 57  VDVESVVQVV----GQIVETSKTELG-------VEVLAHEVKILNGAEPLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    ++  +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVLSLRHERTEAIFKVKSTLVQSFSEFLVENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F++AP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEVAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+    +++    +VLR +F++ +         L+I
Sbjct: 224 ELGFIHDFYEVMQLETDVLRYMFQQVAKNCEKELQLLQI 262



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ G PPHGG   
Sbjct: 343 FDLLYKGLEITSGAQRIHDYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV  LL   N+RE S FP
Sbjct: 399 GLERIVYKLLELTNIREASAFP 420


>gi|49483643|ref|YP_040867.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257425520|ref|ZP_05601945.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428179|ref|ZP_05604577.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430809|ref|ZP_05607191.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433567|ref|ZP_05609925.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436409|ref|ZP_05612456.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|258422514|ref|ZP_05685422.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|282904037|ref|ZP_06311925.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282905802|ref|ZP_06313657.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282911033|ref|ZP_06318835.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914245|ref|ZP_06322032.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282919168|ref|ZP_06326903.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282924352|ref|ZP_06332026.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|283958219|ref|ZP_06375670.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293501271|ref|ZP_06667122.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510232|ref|ZP_06668940.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|293526827|ref|ZP_06671511.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295427964|ref|ZP_06820596.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|59798534|sp|Q6GGV5|SYN_STAAR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|49241772|emb|CAG40463.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257271977|gb|EEV04115.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275020|gb|EEV06507.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278937|gb|EEV09556.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281660|gb|EEV11797.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284691|gb|EEV14811.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|257847271|gb|EEV71277.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|282313739|gb|EFB44132.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316978|gb|EFB47352.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322313|gb|EFB52637.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282324728|gb|EFB55038.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282331094|gb|EFB60608.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595655|gb|EFC00619.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790368|gb|EFC29185.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920385|gb|EFD97449.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096276|gb|EFE26537.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467176|gb|EFF09694.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|295128322|gb|EFG57956.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|315195352|gb|EFU25739.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 430

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L + G +
Sbjct: 16  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++S A + P+     + +       +R L LR   
Sbjct: 76  TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +F  L Q+
Sbjct: 126 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183

Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254
            Q Y +   MA G  + F   P FR E  ++ R   EF+ ++ EM+F    + L   E  
Sbjct: 184 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 241

Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
             +V++ V E           + S    V+  F RI YDDAI
Sbjct: 242 VTHVVKSVLENCKLELKMLERDTSKLEKVATPFPRISYDDAI 283


>gi|114581048|ref|XP_001154956.1| PREDICTED: aspartyl-tRNA synthetase isoform 1 [Pan troglodytes]
          Length = 470

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 156/346 (45%), Gaps = 49/346 (14%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSEWVLCIDGLVM 78
           +S  +      G   FL +R   + +  +VA  D A  ++ K   ++  E ++ I+G+V 
Sbjct: 31  ISSMIQSQEKPGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANINKESIVDIEGVV- 89

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV------------FGEREYPESIR 125
            R       +     +EL  QKI ++S+AE  LPL +             G     +  R
Sbjct: 90  -RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEGRATVNQDTR 148

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R +DLR  T       ++ I +  R  +I + F+E  TP + +++ EG  +    S 
Sbjct: 149 LDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVSY 208

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   EF  LD+EM+F  
Sbjct: 209 FKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVGLDIEMAFNY 266

Query: 246 Q-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LRICYDDA---IRR 285
                 ++I +TM  + +G+ E F     TV+  F           LR+ Y +A   +R 
Sbjct: 267 HYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLRE 326

Query: 286 YGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
            G    D+ DL  P   ++ H V E +  ++F +  K  L+V P Y
Sbjct: 327 AGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 371



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 385 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 440

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 441 GLERVTMLFLGLHNVRQTSMFP 462


>gi|57650409|ref|YP_186338.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           COL]
 gi|87161603|ref|YP_494042.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195188|ref|YP_499989.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|151221577|ref|YP_001332399.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|161509622|ref|YP_001575281.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221140979|ref|ZP_03565472.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|258451112|ref|ZP_05699147.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|262048980|ref|ZP_06021859.1| asparaginyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051626|ref|ZP_06023846.1| asparaginyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|282916721|ref|ZP_06324479.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|282921700|ref|ZP_06329417.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|283770527|ref|ZP_06343419.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           H19]
 gi|284024453|ref|ZP_06378851.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           132]
 gi|294848418|ref|ZP_06789164.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|81694480|sp|Q5HFW9|SYN_STAAC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123291797|sp|Q2FYH6|SYN_STAA8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123722388|sp|Q2FGY6|SYN_STAA3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|172048886|sp|A6QH05|SYN_STAAE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|189083484|sp|A8Z434|SYN_STAAT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|57284595|gb|AAW36689.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           COL]
 gi|87127577|gb|ABD22091.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202746|gb|ABD30556.1| asparaginyl-tRNA synthetase,putative [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|150374377|dbj|BAF67637.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|160368431|gb|ABX29402.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257861167|gb|EEV83980.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|259160467|gb|EEW45491.1| asparaginyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259162912|gb|EEW47475.1| asparaginyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|269940947|emb|CBI49331.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282319208|gb|EFB49560.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|282593962|gb|EFB98951.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|283460674|gb|EFC07764.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           H19]
 gi|283470667|emb|CAQ49878.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
 gi|294824444|gb|EFG40867.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|302333065|gb|ADL23258.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|302751285|gb|ADL65462.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|315197800|gb|EFU28134.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|329314131|gb|AEB88544.1| Asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329723218|gb|EGG59749.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 430

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L + G +
Sbjct: 16  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++S A + P+     + +       +R L LR   
Sbjct: 76  TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +F  L Q+
Sbjct: 126 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183

Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254
            Q Y +   MA G  + F   P FR E  ++ R   EF+ ++ EM+F    + L   E  
Sbjct: 184 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 241

Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
             +V++ V E           + S    V+  F RI YDDAI
Sbjct: 242 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 283


>gi|21283073|ref|NP_646161.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MW2]
 gi|24212397|sp|Q8NWP3|SYN_STAAW RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|21204513|dbj|BAB95209.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MW2]
          Length = 430

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L + G +
Sbjct: 16  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++S A + P+     + +       +R L LR   
Sbjct: 76  TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +F  L Q+
Sbjct: 126 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183

Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254
            Q Y +   MA G  + F   P FR E  ++ R   EF+ ++ EM+F    + L   E  
Sbjct: 184 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 241

Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
             +V++ V E           + S    V+  F RI YDDAI
Sbjct: 242 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 283


>gi|323439543|gb|EGA97264.1| asparaginyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442218|gb|EGA99849.1| asparaginyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 432

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L + G +
Sbjct: 18  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEIFKLAKEITQESSLYVTGTI 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++S A + P+     + +       +R L LR   
Sbjct: 78  TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +F  L Q+
Sbjct: 128 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 185

Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254
            Q Y +   MA G  + F   P FR E  ++ R   EF+ ++ EM+F    + L   E  
Sbjct: 186 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 243

Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
             +V++ V E           + S    V+  F RI YDDAI
Sbjct: 244 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 285


>gi|15924444|ref|NP_371978.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927035|ref|NP_374568.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|148267940|ref|YP_001246883.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|150394003|ref|YP_001316678.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JH1]
 gi|156979773|ref|YP_001442032.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253315963|ref|ZP_04839176.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|255006241|ref|ZP_05144842.2| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257795490|ref|ZP_05644469.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258413299|ref|ZP_05681575.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420594|ref|ZP_05683536.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258426790|ref|ZP_05688010.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258444788|ref|ZP_05693117.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258447378|ref|ZP_05695522.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258449737|ref|ZP_05697838.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258454594|ref|ZP_05702558.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|269203079|ref|YP_003282348.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282892950|ref|ZP_06301185.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282927981|ref|ZP_06335590.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|295407204|ref|ZP_06817004.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296275348|ref|ZP_06857855.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297244628|ref|ZP_06928511.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|54039683|sp|P67572|SYN_STAAN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|54042044|sp|P67571|SYN_STAAM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166232738|sp|A7X2E9|SYN_STAA1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|189083482|sp|A6U1S3|SYN_STAA2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|189083483|sp|A5ISY4|SYN_STAA9 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|13701252|dbj|BAB42547.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247225|dbj|BAB57616.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|147741009|gb|ABQ49307.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149946455|gb|ABR52391.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JH1]
 gi|156721908|dbj|BAF78325.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|257789462|gb|EEV27802.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839863|gb|EEV64331.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843542|gb|EEV67949.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257849951|gb|EEV73909.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257850281|gb|EEV74234.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257853569|gb|EEV76528.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257856985|gb|EEV79885.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257862977|gb|EEV85741.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262075369|gb|ACY11342.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282590278|gb|EFB95358.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282764947|gb|EFC05072.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285817134|gb|ADC37621.1| Asparaginyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294967917|gb|EFG43946.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297178658|gb|EFH37904.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|312829846|emb|CBX34688.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315129169|gb|EFT85164.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|329727061|gb|EGG63517.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 430

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L + G +
Sbjct: 16  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEIAQESSLYVTGTI 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++S A + P+     + +       +R L LR   
Sbjct: 76  TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +F  L Q+
Sbjct: 126 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183

Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254
            Q Y +   MA G  + F   P FR E  ++ R   EF+ ++ EM+F    + L   E  
Sbjct: 184 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 241

Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
             +V++ V E           + S    V+  F RI YDDAI
Sbjct: 242 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 283


>gi|300173468|ref|YP_003772634.1| asparaginyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887847|emb|CBL91815.1| Asparaginyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 435

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 32/287 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           VG  V++  W+ + R  G + FL +RD     Q V   A+   A FE+AK+++ E  L +
Sbjct: 17  VGQTVKIGAWLRQKRGSGKLAFLQLRDGSAFFQAVVVKADISEALFELAKNLKQETSLYV 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +  +          E++   IEI+  + + P+     +E+     F  R L L
Sbjct: 77  TGEIHEDARSSFG-------YEMAVSNIEIIGESHDYPIT---PKEHGTDFLFDERHLYL 126

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +I +       E F +  +P+LT S+PEG  D        + +F  
Sbjct: 127 RHLKPFATLKIRNTLIAATYEFFNNEGFTKLDSPLLTGSAPEGTTDLFETDYFGESAF-- 184

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L   
Sbjct: 185 LSQTGQLYAEA-GAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAFMHQEESLVIQ 243

Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIR 284
           E  +  +  +    N    + L                R+ YDDAI+
Sbjct: 244 ERYISFLISKVLEKNEQELDILKRDKDLLQSYTELPYPRVSYDDAIK 290



 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G  R+   + + Q     G+S E     +G      Q G  PH G   G
Sbjct: 351 LAPEGYGEIIGGSERDTDYDYLKQRIEEEGLSLE----EYGWYLDLRQYGSVPHAGFGLG 406

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQN 567
           ++R+V  + G +++RE   FP   N
Sbjct: 407 LERLVTFVTGEEHIREAIPFPRMTN 431


>gi|290890625|ref|ZP_06553696.1| hypothetical protein AWRIB429_1086 [Oenococcus oeni AWRIB429]
 gi|290479753|gb|EFD88406.1| hypothetical protein AWRIB429_1086 [Oenococcus oeni AWRIB429]
          Length = 434

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 32/287 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V++  W+ + R  G I FL +RD  G  Q    V + D A F++A+ ++ E    +
Sbjct: 16  VGQTVKIGVWLRQKRGSGKIAFLQLRDGTGFMQGVVSVGDVDEATFKLAEHLKQESSFYV 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   S             E++   IEI+  +E+ P+     +E+     F  R L L
Sbjct: 76  TGEIHQDSRSEFG-------FEMAVSDIEIVGESEDYPIT---PKEHGTDFLFDERHLYL 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  II ++      + F++  +PI+T S+PEG  +       ++ ++  
Sbjct: 126 RHQKPFATMKIRDEIIRAIYDFFHKDGFLKLDSPIITDSAPEGTTELFPVKYFDKDAY-- 183

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +   A  F + +   P FR E   + R   EF+ +D EM+++ Q+D L   
Sbjct: 184 LSQTGQLYAEA-GAMAFGKVYDFGPTFRAEKSSTRRHLTEFWMIDAEMAWMHQEDSLKVQ 242

Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIR 284
           E  +  + E   +   V    L                RI YDD ++
Sbjct: 243 ERFIAYLIERVVDNCQVELKMLGQDVEKLRAYTKLPYPRISYDDTVK 289


>gi|56963824|ref|YP_175555.1| asparaginyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|59798484|sp|Q5WGB1|SYN_BACSK RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|56910067|dbj|BAD64594.1| asparaginyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 430

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 126/292 (43%), Gaps = 35/292 (11%)

Query: 14  VSDVGSFVR----LSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVR 66
           ++ VG +V     +  W+   R  G I FL +RD  G  Q   V A      F +AKS+ 
Sbjct: 5   IAQVGRYVNEQVTIGAWIANKRSSGKIAFLQLRDGTGFIQGVVVKAEVPEDVFALAKSIT 64

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  L + G V  R  E   +       ELS ++IE++  A + P+     +++      
Sbjct: 65  QESSLYVTGTV--REDERSPSGY-----ELSVEQIELIHQATDYPI---TPKQHGTEFLM 114

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            +R L LR    H  +  R++II S         F +  +PILT SSPEG  +       
Sbjct: 115 DHRHLWLRSKRQHAIMKIRSQIIRSTYDFFSERGFTKLDSPILTGSSPEGTSELFHTKYF 174

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           ++ ++  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ ++ EM+FVE 
Sbjct: 175 DEDAY--LSQSGQLYAEA-GAMALGRVFTFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEH 231

Query: 247 DDILNTMENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAI 283
           ++ L   E                 L+ +  + +    +   F RI YD+A+
Sbjct: 232 EESLEIQEQYVAHLAKAVLDHCQLELKQLGRDVTKLEAIKAPFPRITYDEAL 283


>gi|320140374|gb|EFW32230.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
          Length = 432

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 121/282 (42%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L + G +
Sbjct: 18  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESSLYVTGTI 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++S A + P+     + +       +R L LR   
Sbjct: 78  TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +F  L Q+
Sbjct: 128 QHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 185

Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254
            Q Y +   MA G  + F   P FR E  ++ R   EF+ ++ EM+F    + L   E  
Sbjct: 186 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 243

Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
             ++++ V E           + S    V+  F RI YDDAI
Sbjct: 244 VTHIVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 285


>gi|254389997|ref|ZP_05005219.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294813913|ref|ZP_06772556.1| Aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326442327|ref|ZP_08217061.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197703706|gb|EDY49518.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294326512|gb|EFG08155.1| Aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 436

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 129/263 (49%), Gaps = 16/263 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-AKSVRSEWVLCIDG 75
           +G  V + GWV+ +R    + F+ +RD  G+ QV    D+   E   +S+  E  + + G
Sbjct: 15  IGRTVSVCGWVNTLRLQSTMQFVVVRDGTGMVQVTHRRDNGPLEARLESLTPESAVRVTG 74

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V+        A +  G +E+  + +EIL+ A   PLP+  +       R  +RFLD+RR
Sbjct: 75  RVVD------AAQVKLGGLEIVPEAVEILNPAA-TPLPI--DEHTGLEQRLDWRFLDVRR 125

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
               + +   +T +   MR    A+   E  TP L  ++ E   +       ++ ++ A 
Sbjct: 126 RPATQLMFAVQTTLEQGMREYAYAQGATEMHTPKLMGTASESGAEVFKLGYFDRSAYLA- 184

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTM 253
            Q+PQ YKQ+ +++G D+ F+I P FR E   + R   EF  +D+E+++++  +D++   
Sbjct: 185 -QSPQFYKQMAISAGIDKVFEIGPVFRAEPSFTSRHATEFTGVDVELAWIDGVEDVMAFE 243

Query: 254 ENVLRGVFEEFSN--GNTVSNNF 274
           E +L     + ++  G  ++  F
Sbjct: 244 ERMLAHAIAKVADAHGEAIAERF 266



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 4/83 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             +DL+  G E+ +G  R H  +V+L+  +  G+S E + +       AF+ G PPHGG+
Sbjct: 349 LSFDLLWKGLEVTTGAQREHRYDVLLKQAAEKGMSPEPLRDYLN----AFRYGCPPHGGL 404

Query: 540 AAGIDRIVMLLLGAKNVREVSLF 562
             G+ R++M++LG  ++RE S  
Sbjct: 405 GMGLGRVLMVMLGLDSIREASFL 427


>gi|194016905|ref|ZP_03055518.1| asparaginyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194011511|gb|EDW21080.1| asparaginyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 431

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 122/282 (43%), Gaps = 31/282 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V A  +   F++AKSV  E  + + G V
Sbjct: 17  VTIGAWIANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEEEVFKLAKSVTQETSVYVTGQV 76

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                  +         EL  + IE++  A + P+     +E+       +R L LR   
Sbjct: 77  TKDERSPLG-------FELQVKSIEVIHEATDYPI---TPKEHGTEFLMDHRHLWLRSKK 126

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  II +       E F++   PILT S+PEG  +       ++ ++  L Q+
Sbjct: 127 QHAIMKIRNEIIRATYEFFHQEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY--LSQS 184

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN-- 255
            Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L   EN  
Sbjct: 185 GQLYMEA-AAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFNENLEYQENYV 243

Query: 256 --VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284
             V++ V E           + +    +   F RI YD+AI+
Sbjct: 244 THVVQSVLENCKVELHTLGRDTAKLENIKTPFPRITYDEAIK 285



 Score = 38.1 bits (87), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 9/117 (7%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC-NGF-EIASGGIRNHMSEVMLQ 506
           +K +   H P ++    M+     D + + A   DL+   G+ EI  G  R H  E++  
Sbjct: 314 DKPVFITHYPTSLKPFYMQPAPDRDDVVLCA---DLIAPEGYGEIIGGSERVHDLELLEA 370

Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                G+ +E     +       Q G  PH G   G++R V  + GA +VRE   FP
Sbjct: 371 RLKEHGLDQET----YKWYTELRQYGSVPHSGFGLGLERTVAWISGAPHVRETIPFP 423


>gi|297584385|ref|YP_003700165.1| asparaginyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142842|gb|ADH99599.1| asparaginyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 429

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 129/292 (44%), Gaps = 35/292 (11%)

Query: 14  VSDVGSFVRLS----GWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVR 66
           +S+VG +V  S     W+   R  G I FL +RD  G  Q   V A  +   F++AK + 
Sbjct: 5   ISEVGKYVDQSVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEEDIFKLAKELT 64

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  L + G V          +      EL+ + +E++ +AE+ P+     +E+      
Sbjct: 65  QESSLYVTGKVR-------EDDRAPSGYELTVESVEVIQMAEDYPIT---PKEHGTEFLM 114

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            +R L LR    H  +  R  II +       + F +   PILT SS EG  +       
Sbjct: 115 DHRHLWLRSRKQHAIMKIRNEIIRATYEFFNEQGFTKIDPPILTGSSAEGTTNLFHTKYF 174

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           ++ ++  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F++ 
Sbjct: 175 DEDAY--LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMDH 231

Query: 247 DDILNTMEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
           D+ L   EN    V++ V +           + +    +S  F RI YD+AI
Sbjct: 232 DESLVLQENYVSFVVQAVLQNCKLELKTLERDTATLEKISAPFPRISYDEAI 283


>gi|228476075|ref|ZP_04060783.1| asparagine--tRNA ligase [Staphylococcus hominis SK119]
 gi|314936411|ref|ZP_07843758.1| asparagine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|228269898|gb|EEK11378.1| asparagine--tRNA ligase [Staphylococcus hominis SK119]
 gi|313655030|gb|EFS18775.1| asparagine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 430

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 121/283 (42%), Gaps = 33/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L + G +
Sbjct: 16  VTIGAWLTNKRSSGKIAFLQLRDGSGFMQGVVVKSEVDEETFKLAKDITQESSLYVIGTI 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++  A + P+     + +       +R L LR   
Sbjct: 76  TEDNRSDLG-------YEMQVKSIEVIHEAHDYPI---TPKNHGTEFLMDHRHLWLRSKK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  II +         F +   PILTAS+PEG  +       +Q +F  L Q+
Sbjct: 126 QHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183

Query: 198 PQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254
            Q Y +   MA G  R F   P FR E  ++ R   EF+ ++ EM+F   ++ L   E  
Sbjct: 184 GQLYMEAAAMAHG--RVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHEESLQVQEQY 241

Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284
             ++++ V E           + S    VS  F RI YDDAI+
Sbjct: 242 VSHIVKSVLEHCKLELKALDRDTSKLEKVSVPFPRISYDDAIK 284


>gi|187933734|ref|YP_001886695.1| aspartyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187721887|gb|ACD23108.1| aspartate--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 429

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 15/246 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + G++HR+R    I F+ +RD  G+ Q V + +    +    ++ E V+ I+G V   
Sbjct: 17  VVIKGFIHRIRRLKKISFIILRDRTGLMQCVVDNEKLYID---KIKLESVVSIEGCV-KE 72

Query: 81  SAETINANIITGQIELSAQKIEILSV-AEELPLPVFGER-EYPESIRFKYRFLDLRRDTL 138
           S  T+         E+  + + I++   E+LP+ +  E  E     +   R L LR + +
Sbjct: 73  SKNTL------SHFEVQVENLIIINEPVEDLPIEINKENLEINLDTKLNNRMLSLRHEKV 126

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                    I N  R  +    F E STP +     EG  +        + ++  L Q+P
Sbjct: 127 SSIFKIENIIANGFRKFLNNNGFTEISTPKIVNEGAEGGSEVFKLKYFEKNAY--LAQSP 184

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMENVL 257
           Q YKQ+++ +GF+R F+I+  +R E+  + R   E+  +D+EM F+E + DI++  E +L
Sbjct: 185 QFYKQMMVGAGFERVFEISHVYRAEEHNTTRHLNEYVSMDLEMGFIEDEKDIMDLEEELL 244

Query: 258 RGVFEE 263
           + + ++
Sbjct: 245 KFILDK 250



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 15/105 (14%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +TMP G  E+             +DL+  G EI +GG R H   ++++     G + +  
Sbjct: 332 YTMPCGEDET-----------HSFDLLFRGLEITTGGQRIHEYNMLIENMKYKGFNPQNY 380

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           E+        F+ GM PHGG+A G++RI   +LG +NVRE SL P
Sbjct: 381 ESYISN----FKYGMMPHGGLAIGLERITCRMLGIENVREGSLIP 421


>gi|320450960|ref|YP_004203056.1| aspartyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151129|gb|ADW22507.1| aspartyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 422

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 127/260 (48%), Gaps = 24/260 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V L G++H  R  G + FL +RD  GI QVV                E  L + G 
Sbjct: 12  VGEEVELLGFLHWRRDLGKVQFLLLRDRSGIVQVVTGGQKLPL-------PESSLRVRGQ 64

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE--REYPESIRFKYRFLDL 133
           V+             G +E+ A++IEILS A E  P+ +  E  R  P+++  +YR++ L
Sbjct: 65  VVENPK-------APGGLEVQAKEIEILSPALEPTPVEIPKEEWRASPDTL-LEYRYVTL 116

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +     +  +  ++   R  +  ++F E  TP +  +  EG             ++ A
Sbjct: 117 RGEKARAPLRVQAALVRGFRRYLDRQDFTEIFTPKVVRAGAEGGSGLFGVDYFEYRAYLA 176

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNT 252
             Q+PQ YKQ+ M   F+R +++AP +R E+  + R   E+  LD+EM F+E ++D++  
Sbjct: 177 --QSPQLYKQI-MVGVFERVYEVAPVWRMEEHNTSRHLNEYLSLDVEMGFIEGEEDLMRL 233

Query: 253 MENVLRGVFEEF--SNGNTV 270
            EN+L+ + EE   S GN +
Sbjct: 234 EENLLQEMLEEALSSAGNEI 253



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SGG R H    ++++    G+  E     F G    F+ GMPPHGG A 
Sbjct: 337 FDLLFRGLEITSGGQRIHRYPDLVESLKAKGMDPEA----FQGYLEVFKYGMPPHGGFAI 392

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+   LLG  NVR    FP  ++
Sbjct: 393 GAERLTQKLLGLPNVRYARAFPRDRH 418


>gi|228907946|ref|ZP_04071797.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL
           200]
 gi|228851705|gb|EEM96508.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL
           200]
          Length = 428

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 126/268 (47%), Gaps = 19/268 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C +      G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 1   MKRSLTKECTE----QSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 56

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++ +
Sbjct: 57  ----VDVESVVHVIGEIVETSKTELG-------VEVLAHEVKVINGAEPLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++  + S    +I  +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVISLRHERTAAIFKVKSTFVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSN 266
           E+ F+    +++    +VL+ +F++ + 
Sbjct: 224 ELGFIHDFYEVMQLETDVLQYMFQQVAK 251



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+  E    +F      F+ G PPHGG   
Sbjct: 343 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGI 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V  LL   NVRE S FP
Sbjct: 399 GLERVVYKLLELTNVREASAFP 420


>gi|212638975|ref|YP_002315495.1| asparaginyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212560455|gb|ACJ33510.1| Asparaginyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 454

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 119/286 (41%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q V   A  D   F+ AKS+  E  L +
Sbjct: 36  VGQEVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVEKAQVDEDVFQTAKSMTQESSLYV 95

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V   +             ELS   IEI+  A + P+     +E+       +R L L
Sbjct: 96  TGVVREDARSPFG-------YELSVTNIEIIHTAVDYPI---TPKEHGVEFLMDHRHLWL 145

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  +I +         F++   PILT S+PEG  +       ++ ++  
Sbjct: 146 RSKRQHAIMKIRNEVIRATYEFFNENGFVKVDPPILTGSAPEGTTELFHTKYFDEDAY-- 203

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F + +D L   
Sbjct: 204 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYQFEDNLQVQ 262

Query: 254 ENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           E                 L+ +  + S    V   F RI YD+AI+
Sbjct: 263 EQYVSHIVQSVLKHCQLELKTLGRDTSKLENVKPPFARITYDEAIQ 308


>gi|329940507|ref|ZP_08289788.1| aspartyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329300568|gb|EGG44465.1| aspartyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 440

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 147/308 (47%), Gaps = 36/308 (11%)

Query: 7   HSCGDLGVSDV----GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           H+   + VSD+    G  V +SGW H +R    + F+ +RDH G+ QV      A  +I 
Sbjct: 3   HTTDRVLVSDLREHLGRTVSVSGWAHTLRLLSKVQFVVVRDHTGMVQVTHRRGGAGDDIE 62

Query: 63  KSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
            +++    E  + I G    R AE  N  +    +E+  +++E+L+ A   PLP+  + +
Sbjct: 63  AALQQLTPESAVRITG----RVAE--NPIVKLHSLEIIPERVEVLNRAA-TPLPI--DEQ 113

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                R  +RFLD+RR    + +   +T +   MR    A+   E  TP L  ++ E   
Sbjct: 114 TGLEHRLDWRFLDVRRRPAAQLMFAVQTTLEQGMREYAYAQGATEMHTPKLMGTASESGA 173

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +       ++ ++ A  Q+PQ YKQ+ +++G ++ F+I P FR E   + R   EF  +D
Sbjct: 174 EVFELGYFDRSAYLA--QSPQFYKQMAISAGIEKVFEIGPVFRAEPSFTSRHATEFTGVD 231

Query: 239 MEMSFVEQ-DDILNTMENVL------------RGVFEEFSNGNTV-SNNFLRICY---DD 281
           +E+++++  +D++   E +L              V E+F    TV +  F RI      D
Sbjct: 232 VELAWIDGVEDVMAFEEQMLAHAIAKVAGAHREAVREQFGVEITVPATPFPRITMAKAHD 291

Query: 282 AIRRYGTD 289
            +R+ G D
Sbjct: 292 ILRKGGWD 299



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 4/83 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             +DL+  G EI +G  R H  +V+++  +  G+S E +++       AF+ G PPHGG+
Sbjct: 353 LSFDLLWKGLEITTGAQREHRYDVLMKQAAEKGMSPEPMQDYLN----AFRYGCPPHGGL 408

Query: 540 AAGIDRIVMLLLGAKNVREVSLF 562
             G+ R++M+LLG +++RE +  
Sbjct: 409 GMGLGRVLMVLLGLESIREATFL 431


>gi|47570088|ref|ZP_00240747.1| aspartyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553249|gb|EAL11641.1| aspartyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 432

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 15/262 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V L GWV ++R  G + FL IRD  G+ Q V   + A +++                
Sbjct: 18  GKVVLLQGWVKKIRHLGNVSFLLIRDRSGVMQCVLENELAGYKVDVESVV---------- 67

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRD 136
                E +  +     +E+ A +++IL+ AE LP  +  ++ +         R L LR +
Sbjct: 68  -QVVGEIVETSKTELGVEVLAHEVKILNGAEPLPFEINKKKLQVGLDQLLNERVLSLRHE 126

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +      ++ ++ S    +I  +F    TP + +   EG  +        + ++ A  Q
Sbjct: 127 RIAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAYLA--Q 184

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMEN 255
           +PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+E  F+    +++    +
Sbjct: 185 SPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVEFGFIHDFHEVMQLETD 244

Query: 256 VLRGVFEEFSNGNTVSNNFLRI 277
           VLR +F++ +         L+I
Sbjct: 245 VLRYMFQQVAKKCEKELQLLQI 266



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F+  G+      ++F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHNYEMLLASFNEKGLHP----DKFQSYLTTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++  LL   NVRE S FP
Sbjct: 403 GLERVIYKLLELTNVREASAFP 424


>gi|109104378|ref|XP_001095858.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
          Length = 501

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 157/358 (43%), Gaps = 49/358 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEI---AKSVR 66
           DL +      V +   VH  R  G   FL  R   + +  +V   +    E+   A  + 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKECFLVQRTQGFNVESIVGVGEGDKGELVRFASDIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----------- 114
            E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL +           
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 115 -FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F     TV+  F           LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +A   +R  G    D+ DL  P   ++ H V E +  ++F +  K  L+V P Y
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLAVRPFY 402



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 416 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 472 GLERVTMLFLGLHNVRQTSMFP 493


>gi|310659724|ref|YP_003937445.1| aspartyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308826502|emb|CBH22540.1| aspartyl-tRNA synthetase [Clostridium sticklandii]
          Length = 429

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 117/239 (48%), Gaps = 14/239 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V +SGWVHR+R  G I F+ +RD  G+ Q V   D+   +I K ++ E V+ I G V   
Sbjct: 17  VVVSGWVHRLRKLGKIAFIILRDKSGLVQCVI--DTKTIDI-KDLKLEAVIKIKGKVKLA 73

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFKYRFLDLRRDTL 138
             ++         +E+    I++LS A E+LP+ +  E  +    +    R L LR   L
Sbjct: 74  QGKS-------ESLEIQVISIDMLSPAHEDLPIEINKENMDISLDVMLNNRALSLRNPKL 126

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
              +  +  +  +    +I  +F +  TP + A   EG  +    +     ++  L Q+P
Sbjct: 127 GAVLKVKAVLAQAFSDFLIKNDFTQIFTPKIVAQGTEGGSNLFELNYFETKAY--LAQSP 184

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           Q YKQ+++ +GF+R F+I   +R E   + R   E+  LD+E  F++ +  +  +EN L
Sbjct: 185 QFYKQIMVGAGFERVFEIGHVYRAESHDTKRHLNEYVSLDVEFGFIQDEYEIMELENRL 243



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 15/105 (14%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +TMP G  E+             +DL+  G EI +GG R H    +L+  +  G+SKE  
Sbjct: 332 YTMPYGEGETR-----------SFDLLFRGLEITTGGQRIHDYTQLLENIAKRGLSKE-- 378

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             +F      F+ GMPPHGG A G++RI  +LLG  NVR  S FP
Sbjct: 379 --QFKDYLYIFKYGMPPHGGFAIGLERITSMLLGFDNVRYASAFP 421


>gi|73662599|ref|YP_301380.1| asparaginyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|82582282|sp|Q49XR0|SYN_STAS1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|72495114|dbj|BAE18435.1| asparaginyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 430

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 118/286 (41%), Gaps = 33/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           +G  V +  W+   R  G I FL +RD  G  Q V   A  D   F+ AK +  E  L +
Sbjct: 12  IGQEVTIGAWLTNKRSSGKIAFLQLRDGTGFIQGVVAKAEVDEEIFQKAKEITQESSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++   +   I         E+  + IE++S A + P+     + +       +R L L
Sbjct: 72  TGVISEDNRSDIG-------YEMQVKSIEVISEAHDYPI---TPKNHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +         F +   PILTAS+PEG  +       +Q +F  
Sbjct: 122 RSKKQHAVMKIRNEIIRATYEFFNDNGFTKIDPPILTASAPEGTSELFHTKYFDQDAF-- 179

Query: 194 LPQAPQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           L Q+ Q Y +   MA G  R F   P FR E  ++ R   EF+ ++ EM+F E    L  
Sbjct: 180 LSQSGQLYMEAAAMAHG--RVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFCEHAQSLEV 237

Query: 253 MENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAI 283
            E                 L+ +  + S    V+  F RI Y DA+
Sbjct: 238 QEQYVTHVVKSVLNHCKLELKALDRDTSKLEKVTTPFPRITYADAV 283


>gi|226312103|ref|YP_002771997.1| asparaginyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226095051|dbj|BAH43493.1| asparaginyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 429

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  VRL  W++  R  G I FL +RD  G  Q   V A      +E A  +  E  L I
Sbjct: 12  VGQEVRLGCWLYNKRSSGKIQFLQLRDGSGFIQGVVVKAEVAEEVWENASQLTQESSLYI 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V +      +    +G  EL+   +EI+ +A+E P+ +   +E+       +R L L
Sbjct: 72  TGSVRA------DDRAPSG-YELTVTGVEIIQIAQEYPISL---KEHGVDFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R+ +I +M        F++   PILT +S EG  +       ++ ++  
Sbjct: 122 RSPRQRAVMAVRSEVIRAMYEFFHENGFVKVDPPILTPTSAEGTTNLFHTKYFDEDAY-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD----- 248
           L Q+ Q Y +   A    R +   P FR E  ++ R   EF+ ++ EM+FV+ ++     
Sbjct: 180 LSQSGQLYMEA-AAMALGRVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVDHEENLRIQ 238

Query: 249 ----------ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
                     +L   E  L+ +  + +    V+ +F RI YDDAI+
Sbjct: 239 EAFVSHVVQSVLKNCERELKTLERDTTKLQNVTGSFPRISYDDAIK 284


>gi|328766451|gb|EGF76505.1| hypothetical protein BATDEDRAFT_14798 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 531

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 128/276 (46%), Gaps = 30/276 (10%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSAC---FEIAK 63
            ++  S VGS + LS  V  VRP G  ++F+ +R      Q V   N +S      + A 
Sbjct: 77  SEVNASHVGSSILLSARVQTVRPTGSKMLFMTLRQGTDSLQTVLTVNAESVSKHMLKFAT 136

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+  E ++ I G V+    + +       + EL   KI I+S A  LP     +   P+S
Sbjct: 137 SISPESLVLISGEVIK--VDVLITGCTVQEYELKVSKIFIVSEAARLPF-TLEDATRPDS 193

Query: 124 --------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTP 167
                          R   R +DLR  T+    + R +   S   R   +N  F+E  TP
Sbjct: 194 DFTEESGFSKINLETRLDNRVIDLR--TITNQAIFRIQAGVSKLFREFLDNKDFVEIHTP 251

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            L  ++ EG  +    S      F A  Q+PQ YKQ+++ + F+R ++IAP FR E+ ++
Sbjct: 252 KLIGAASEGGANVFRVSYFKGCGFLA--QSPQLYKQMMVCADFERVYEIAPVFRAENSQT 309

Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
            R   EF  LDMEM+F E   ++L+ ++ +   +F+
Sbjct: 310 HRHMTEFMGLDMEMAFQEHYHEVLDVLDGLFVSIFQ 345



 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H S  + Q     G+    ++        AF+ G PPH G   
Sbjct: 446 YDFFVRGEEILSGAQRIHDSAFLKQRAEEHGVDISTIQPYID----AFKYGAPPHAGGGI 501

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML L   N+R+ SLFP
Sbjct: 502 GLERVVMLYLDLGNIRKTSLFP 523


>gi|229544031|ref|ZP_04433090.1| asparaginyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229325170|gb|EEN90846.1| asparaginyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 430

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 119/285 (41%), Gaps = 31/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73
           +G  V +  W++  R  G I FL++RD  G  Q V   + A    F+ AKS+  E    +
Sbjct: 12  IGEEVTIGVWLNNKRSSGKIAFLELRDGTGFIQGVVVKNEAGEEVFQTAKSMSQETSFYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V   +             EL    I+I+  A + P+     + +       +R L L
Sbjct: 72  TGTVREDARSPFG-------YELQVTGIQIIHEAVDYPIT---PKAHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +         F +   PILT S+PEG  +       ++ ++  
Sbjct: 122 RSRRQHAVMKIRNEIIRATYEFFNTHGFTKIDPPILTGSAPEGTTELFHTKYFDEEAY-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F E +D L   
Sbjct: 180 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYEHEDSLKVQ 238

Query: 254 EN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
           E     ++R V E           + S    VS  F RI YDDAI
Sbjct: 239 EQYVSYIVRSVLENCKLDLHRLGRDTSKLEQVSAPFPRITYDDAI 283


>gi|157692736|ref|YP_001487198.1| asparaginyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157681494|gb|ABV62638.1| asparagine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 452

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 122/282 (43%), Gaps = 31/282 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V A  +   F++AKSV  E  + + G V
Sbjct: 38  VTIGAWIANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEEEVFKLAKSVTQETSVYVTGQV 97

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                  +         EL  + IE++  A + P+     +E+       +R L LR   
Sbjct: 98  TKDERSPLG-------FELQVKSIEVIHEATDYPI---TPKEHGTEFLMDHRHLWLRSKK 147

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  II +       E F++   PILT S+PEG  +       ++ ++  L Q+
Sbjct: 148 QHAIMKIRNEIIRATYEFFHQEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY--LSQS 205

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN-- 255
            Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L   EN  
Sbjct: 206 GQLYMEA-AAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFNENLEYQENYV 264

Query: 256 --VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284
             V++ V E           + +    +   F RI YD+AI+
Sbjct: 265 THVVQSVLENCKVELHTLGRDTAKLENIKAPFPRITYDEAIK 306



 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 9/117 (7%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC-NGF-EIASGGIRNHMSEVMLQ 506
           +K +   H P ++    M+     D + + A   DL+   G+ EI  G  R H  E++  
Sbjct: 335 DKPVFITHYPTSLKPFYMQPAPDRDDVVLCA---DLIAPEGYGEIIGGSERVHDLELLEA 391

Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                G+ +E     +       Q G  PH G   G++R V  + GA +VRE   FP
Sbjct: 392 RLKEHGLDQET----YKWYTELRQYGSVPHSGFGLGLERTVAWISGAPHVRETIPFP 444


>gi|270307940|ref|YP_003329998.1| lysyl-tRNA synthetase (class II) [Dehalococcoides sp. VS]
 gi|270153832|gb|ACZ61670.1| lysyl-tRNA synthetase (class II) [Dehalococcoides sp. VS]
          Length = 498

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 138/284 (48%), Gaps = 32/284 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCIDGLV 77
           +R++G +   R  G I F+DIRD  G  Q+     + D A  E+ K +     +  +G +
Sbjct: 56  LRIAGRIMTRRDMGKISFMDIRDGSGKIQIFCRQNDMDEASIELLKDLDLGDFIGAEGSL 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           M            TG+  L+A +I +LS +  LPLP           R++ R+LDL  + 
Sbjct: 116 MRTR---------TGEPSLAATRITMLSKSL-LPLPEKWHGLQDVEKRYRQRYLDLISNA 165

Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG----ARDFLVPSRVNQGSFY 192
              +  + R+R+I+++RC M A+ F+E  TP+L    PE     AR F+   +     FY
Sbjct: 166 DARQTFLTRSRVISAIRCFMSAKEFLEVETPVL---QPEAGGALARPFITHHQALDCDFY 222

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  A + + + L+  GFDR ++I   FR+E   +   P EF  ++   ++ +  D+++ 
Sbjct: 223 -MRIALELHLKRLIVGGFDRVYEIGRIFRNEGVSTRHNP-EFTMMESYQAYADYKDVMDF 280

Query: 253 MENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
           +E ++  V +E S G TV         +  + R+   DA+++Y 
Sbjct: 281 LEEMVSSVVKEISGGYTVPFGDITLDFTPPWPRLTIRDAVKQYA 324



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 28/43 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A   GMPP GG+  GIDR+VMLL    ++REV LFP  ++  D
Sbjct: 451 ALAYGMPPTGGLGVGIDRLVMLLTNHDSIREVILFPALKDRED 493


>gi|288556137|ref|YP_003428072.1| asparaginyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288547297|gb|ADC51180.1| asparaginyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 430

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 122/292 (41%), Gaps = 35/292 (11%)

Query: 14  VSDVGSFVR----LSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVR 66
           ++ VG++V     +  W+   R  G I FL +RD  G  Q   V A      F+ AK++ 
Sbjct: 5   IAKVGNYVEQEVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVVKAEVGEEAFQAAKNLT 64

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  L + G V +        +      EL+  K+E++  A + P+     +E+      
Sbjct: 65  QESSLYVTGTVRAD-------DRAPSGYELTVTKVEVIHEATDYPIT---PKEHGTEFLM 114

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            +R L LR    H  +  R  II +        +F +   PILT S+PEG  +       
Sbjct: 115 DHRHLWLRSKRQHAVMKVRNEIIRATYEFFNQNDFAKVDPPILTGSAPEGTTELFATKYF 174

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           ++ ++  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ ++ EM+FVE 
Sbjct: 175 DEDAY--LSQSGQLYMEA-AAMALGRVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEF 231

Query: 247 DDILNTMENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAI 283
           D+ L   E                 L+ +  +      V   F RI YDDAI
Sbjct: 232 DESLEIQEQYVSYLAKSVLENCQLELKTLGRDTEKLEKVQAPFPRISYDDAI 283


>gi|15614259|ref|NP_242562.1| asparaginyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|20139934|sp|Q9KC78|SYN_BACHD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|10174313|dbj|BAB05415.1| asparaginyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 430

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 126/293 (43%), Gaps = 35/293 (11%)

Query: 14  VSDVGSFV----RLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVR 66
           ++ +G +V     L  W+   R  G I FL +RD  G  Q   V A      F+ AK++ 
Sbjct: 5   IAKIGQYVDQEVTLGAWLANKRSSGKIAFLQLRDGTGFIQGVVVKAEVGDEWFQKAKNLT 64

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  L + G+V  R  E   +       EL+    +I+  A + P+     +E+      
Sbjct: 65  QESSLYVTGIV--RKDERAPSGY-----ELTVTSFDIIHEATDYPIT---PKEHGTEFLM 114

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            +R L +R    H  +  R  II +         F++   PILT S+PEG  +       
Sbjct: 115 DHRHLWIRSRKQHAVLRIRNEIIRATYEFFHENGFVKVDPPILTGSAPEGTTELFHTKYF 174

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           ++ +F  L Q+ Q Y +   A  F R F   P FR E  ++ R   EF+ ++ EM+FVE 
Sbjct: 175 DEDAF--LSQSGQLYMEA-AALAFGRVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEF 231

Query: 247 DDILNTMENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           ++ L   EN                L+ +  + S   ++   F RI YDDAI+
Sbjct: 232 EESLEIQENYVAYIVQSVLKHCAIELKTLGRDTSVLESIQAPFPRISYDDAIK 284


>gi|289812186|ref|ZP_06542815.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 109

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 1/108 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+ LP
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLP 109


>gi|218961042|ref|YP_001740817.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS)
           [Candidatus Cloacamonas acidaminovorans]
 gi|167729699|emb|CAO80611.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS)
           [Candidatus Cloacamonas acidaminovorans]
          Length = 431

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 120/257 (46%), Gaps = 19/257 (7%)

Query: 11  DLGVSDV----GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD--SACFEIAK 63
           D+ V D+    G  VRL GWV  +R  G ++F+ +RD  G  Q VA  PD     FE AK
Sbjct: 3   DVFVKDIEKYLGQEVRLKGWVRNIRHSGKLLFIILRDGTGEIQTVAFQPDLGEKAFETAK 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +  E  + I G+      +        G  EL   +++ L +A+E P+   G++E+   
Sbjct: 63  HLTLESSVIICGIPNLHPKQE-------GVYELQVTQVQPLQIADEYPI---GKKEHGPD 112

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
                R L +R       +  R  +  ++   +   NFI   +PILT ++ EG       
Sbjct: 113 FLLSNRHLWIRSQKQWAILRIRHTVYYAICNYLNEHNFIRFDSPILTPNACEGTTTLFEL 172

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              ++G  Y L Q+ Q Y +  + S F R +   P FR E  ++ +   EF+ +D E +F
Sbjct: 173 DYFDEGKAY-LSQSGQLYLETGIMS-FGRVYDFGPVFRAERSKTRKHLTEFWMMDAEAAF 230

Query: 244 VEQDDILNTMENVLRGV 260
           VE D+ +   E+++R V
Sbjct: 231 VEHDENMQIQEDLIRYV 247


>gi|55981421|ref|YP_144718.1| aspartyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|30749602|pdb|1N9W|A Chain A, Crystal Structure Of The Non-Discriminating And Archaeal-
           Type Aspartyl-Trna Synthetase From Thermus Thermophilus
 gi|30749603|pdb|1N9W|B Chain B, Crystal Structure Of The Non-Discriminating And Archaeal-
           Type Aspartyl-Trna Synthetase From Thermus Thermophilus
 gi|304445796|pdb|3KFU|A Chain A, Crystal Structure Of The Transamidosome
 gi|304445797|pdb|3KFU|B Chain B, Crystal Structure Of The Transamidosome
 gi|304445798|pdb|3KFU|C Chain C, Crystal Structure Of The Transamidosome
 gi|304445799|pdb|3KFU|D Chain D, Crystal Structure Of The Transamidosome
 gi|7385087|gb|AAF61689.1| aspartyl-tRNA synthetase 2 [Thermus thermophilus]
 gi|55772834|dbj|BAD71275.1| non-discriminating and archaeal-type aspartyl-tRNA synthetase
           [Thermus thermophilus HB8]
          Length = 422

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 130/263 (49%), Gaps = 36/263 (13%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN------PDSACFEIAKSVRSE 68
           + VG  V L G++H  R  G I FL +RD  G+ QVV        P+SA           
Sbjct: 10  AHVGQEVELLGFLHWRRDLGRIQFLLLRDRSGVVQVVTGGLKLPLPESA----------- 58

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY----PESI 124
             L + GLV+       NA    G +E+ A+++E+LS A E P PV   +E     P+++
Sbjct: 59  --LRVRGLVVE------NAKA-PGGLEVQAKEVEVLSPALE-PTPVEIPKEEWRANPDTL 108

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
             +YR++ LR +     +  +  ++   R  +  ++F E  TP +  +  EG        
Sbjct: 109 -LEYRYVTLRGEKARAPLKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGAEGGSGLFGVD 167

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              + ++ A  Q+PQ YKQ+ M   F+R +++AP +R E+  + R   E+  LD+EM F+
Sbjct: 168 YFEKRAYLA--QSPQLYKQI-MVGVFERVYEVAPVWRMEEHHTSRHLNEYLSLDVEMGFI 224

Query: 245 -EQDDILNTMENVLRGVFEEFSN 266
            +++D++   E +L  + EE  N
Sbjct: 225 ADEEDLMRLEEALLAEMLEEALN 247



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SGG R H  E +L++    G+  E     F G    F+ GMPPHGG A 
Sbjct: 337 FDLLFRGLEITSGGQRIHRYEELLESLKAKGMDPEA----FHGYLEVFKYGMPPHGGFAI 392

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+   LLG  NVR    FP  ++
Sbjct: 393 GAERLTQKLLGLPNVRYARAFPRDRH 418


>gi|319892446|ref|YP_004149321.1| Asparaginyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162142|gb|ADV05685.1| Asparaginyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323464451|gb|ADX76604.1| asparaginyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 430

 Score = 91.7 bits (226), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 119/286 (41%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           +G  V +  W+   R  G I FL +RD  G  Q   V A+ D   F+ AKS+  E  L +
Sbjct: 12  IGQEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKADVDEDIFQRAKSLTQETSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +   +         E+  + IE++  A + P+     + +       +R L L
Sbjct: 72  TGEITEDNRSDLG-------YEMQVKNIEVIHEAHDYPI---TPKNHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +         F +   PILTAS+PEG  +       ++ +F  
Sbjct: 122 RSKKQHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDEDAF-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  + + F   P FR E  ++ R   EF+ ++ EM+F   ++ L   
Sbjct: 180 LSQSGQLYMEA-AAMAYGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTTHEESLEVQ 238

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284
           E  +  V +               + S    V   F RI YDDAI+
Sbjct: 239 EAYVSYVVQSVLKNCQIELKLLERDTSKLEKVQAPFPRISYDDAIK 284


>gi|227510345|ref|ZP_03940394.1| asparaginyl-tRNA synthetase [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227189997|gb|EEI70064.1| asparaginyl-tRNA synthetase [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 426

 Score = 91.7 bits (226), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 16/244 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73
           V   V++  W+   R  G I FL +RD     Q V    N     FE+AK V+ E  + I
Sbjct: 8   VNEKVKIGVWLTNKRSSGKIAFLQLRDGTAYFQGVVVKNNVSEETFELAKEVKQETSMWI 67

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++   +             E+  + IE++S + E P+     +E+       +R L L
Sbjct: 68  TGIIHEDNRSHFG-------YEIEVESIEVVSESHEYPI---TPKEHGVDFLMDHRHLWL 117

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  +I +       E FI+   PILT S+PEG  D    +  ++ ++  
Sbjct: 118 RSSRPHAVMRIRNEVIKATYDFFNDEGFIKIDAPILTGSAPEGTTDLFHTTYFDKDAY-- 175

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y++   A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L+  
Sbjct: 176 LSQSGQLYEEA-GAEAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLDIQ 234

Query: 254 ENVL 257
           E  +
Sbjct: 235 ERYI 238


>gi|46199389|ref|YP_005056.1| aspartyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|46197014|gb|AAS81429.1| aspartyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 422

 Score = 91.7 bits (226), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 130/263 (49%), Gaps = 36/263 (13%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN------PDSACFEIAKSVRSE 68
           + VG  V L G++H  R  G I FL +RD  G+ QVV        P+SA           
Sbjct: 10  AHVGQEVELLGFLHWRRDLGRIQFLLLRDRSGVVQVVTGGLKLPLPESA----------- 58

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY----PESI 124
             L + GLV+       NA    G +E+ A+++E+LS A E P PV   +E     P+++
Sbjct: 59  --LRVRGLVVE------NAKA-PGGLEVQAKEVEVLSPALE-PTPVEIPKEEWRANPDTL 108

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
             +YR++ LR +     +  +  ++   R  +  ++F E  TP +  +  EG        
Sbjct: 109 -LEYRYVTLRGEKARAPLKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGAEGGSGLFGVD 167

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              + ++ A  Q+PQ YKQ+ M   F+R +++AP +R E+  + R   E+  LD+EM F+
Sbjct: 168 YFEKRAYLA--QSPQLYKQI-MVGVFERVYEVAPVWRMEEHHTSRHLNEYLSLDVEMGFI 224

Query: 245 -EQDDILNTMENVLRGVFEEFSN 266
            +++D++   E +L  + EE  N
Sbjct: 225 ADEEDLMRLEEALLAEMLEEALN 247



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SGG R H  E +L++    G+  E     F G    F+ GMPPHGG A 
Sbjct: 337 FDLLFRGLEITSGGQRIHRYEELLESLKAKGMDPEA----FQGYLEVFKYGMPPHGGFAI 392

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+   LLG  NVR    FP  ++
Sbjct: 393 GAERLTQKLLGLPNVRYARAFPRDRH 418


>gi|49522592|gb|AAH75373.1| aspartyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
          Length = 531

 Score = 91.7 bits (226), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 155/357 (43%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL V      V +   VH  R  G   FL +R   + +  +VA  + A  ++ K   ++ 
Sbjct: 80  DLTVQKADETVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGERASKQMVKFAANIT 139

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF---------- 115
            E ++ ++G+V  R  +    +     +EL  ++I ++S AE  LPL +           
Sbjct: 140 KESIVDVEGVV--RKVDQKIESCTQQDVELHIERIYVISAAEPRLPLQLEDAVRPETEGD 197

Query: 116 --GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ +    R  +  + F+E  TP + +++
Sbjct: 198 EEGRATVNQDTRLDNRVIDLRTSTSQAVFGLQSGVCQLFRETLTQKGFVEIQTPKIISAA 257

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++  L Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 258 SEGGANVFTVSYFKTSAY--LAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 315

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        D+I +T+  + +G+ E F     TV   F           LR
Sbjct: 316 FVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQTEIQTVCKQFPSEPFKFLEPTLR 375

Query: 277 ICYDDAI---RRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y + +   R  G    D+ DL  P   ++  + +    ++F +  K  L+V P Y
Sbjct: 376 LEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 432



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +  ++  I  E    +      +F+ G PPH G   
Sbjct: 446 YDMFMRGEEILSGAQRVHDPQLLTERATHHAIDLE----KIKAYIDSFRFGAPPHAGGGI 501

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 502 GLERVTMLYLGLHNVRQTSMFP 523


>gi|149246568|ref|XP_001527720.1| aspartyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146447674|gb|EDK42062.1| aspartyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 573

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 34/285 (11%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSACFEIAKS 64
           +  DL  +D G  V     VH+ R  G  ++FL +R    + Q +   N +     I+K 
Sbjct: 109 NISDLSAADDGKTVVFRARVHKTRQQGATMVFLTLRQQSNLIQALLKTNKEQDNTAISKQ 168

Query: 65  -------VRSEWVLCIDGLV-----MSRSAETINANI-ITG--QIELSAQKIEIL----- 104
                  +  E ++ ++G V     + +SA   +A I IT    I+ + +++ +L     
Sbjct: 169 MVKWAGGINLESIVLVEGKVAKVDELVKSATVQDAEIHITKIFTIQETPEQLPLLIEDAS 228

Query: 105 ---SVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENF 161
                AEEL LPV          R   R +DLR  T       ++ +    R  +  + F
Sbjct: 229 RTEQEAEELGLPVVNL-----DTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLTKKKF 283

Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
            E  TP +  ++ EG  +    +     +F A  Q+PQ YKQ L+A  F+R F+IAP FR
Sbjct: 284 TEIHTPKIIGAASEGGSNVFEINYFKGSAFLA--QSPQLYKQQLIAGDFERVFEIAPVFR 341

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFS 265
            E+  + R   EF  LD+EM+F E  D++L  +E +   +F E  
Sbjct: 342 AENSNTHRHMTEFTGLDLEMAFEEHYDEVLEVLEELFVFIFTELK 386



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 41/84 (48%), Gaps = 6/84 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG--GLYRAFQCGMPPHGGI 539
           YD    G EI SG  R H  E++ +       + EV  N  G      AF  G PPH G 
Sbjct: 486 YDFFMRGEEILSGAQRIHDPELLKERMR----AHEVDPNVPGLNDYVDAFTYGCPPHAGG 541

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             G++R+VM  L  KN+R  SLFP
Sbjct: 542 GIGLERVVMFFLDLKNIRRASLFP 565


>gi|45361459|ref|NP_989306.1| aspartyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
 gi|39794467|gb|AAH64273.1| aspartyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
          Length = 531

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 155/357 (43%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL V      V +   VH  R  G   FL +R   + +  +VA  + A  ++ K   ++ 
Sbjct: 80  DLTVQKADETVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGERASKQMVKFAANIT 139

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF---------- 115
            E ++ ++G+V  R  +    +     +EL  ++I ++S AE  LPL +           
Sbjct: 140 KESIVDVEGVV--RKVDQKIESCTQQDVELHIERIYVISAAEPRLPLQLEDAVRPETEGD 197

Query: 116 --GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ +    R  +  + F+E  TP + +++
Sbjct: 198 EEGRATVNQDTRLDNRVIDLRTSTSQAVFGLQSGVCQLFRETLTQKGFVEIQTPKIISAA 257

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++  L Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 258 SEGGANVFTVSYFKTSAY--LAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 315

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        D+I +T+  + +G+ E F     TV   F           LR
Sbjct: 316 FVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQTEIQTVCKQFPSEPFKFLEPTLR 375

Query: 277 ICYDDAI---RRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y + +   R  G    D+ DL  P   ++  + +    ++F +  K  L+V P Y
Sbjct: 376 LEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 432



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +  ++  I  E    +      +F+ G PPH G   
Sbjct: 446 YDMFMRGEEILSGAQRVHDPQLLTERATHHAIDLE----KIKAYIDSFRFGAPPHAGGGI 501

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 502 GLERVTMLYLGLHNVRQTSMFP 523


>gi|148233149|ref|NP_001080336.1| aspartyl-tRNA synthetase [Xenopus laevis]
 gi|27503265|gb|AAH42227.1| Dars-prov protein [Xenopus laevis]
          Length = 530

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 158/357 (44%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL V      V +   VH  R  G   FL +R   + +  +VA  + A  ++ K   ++ 
Sbjct: 79  DLTVQIADETVWVRSRVHTSRAKGKQCFLVLRQQQFNVQALVAVGERASKQMVKFAANIT 138

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF--------GE 117
            E ++ ++G+V  R  +    +     +EL  ++I ++S AE  LPL +         GE
Sbjct: 139 KESIVDVEGVV--RKVDQKIESCTQQDVELHIERIYVISAAEPRLPLQLEDAVRPETEGE 196

Query: 118 REYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            E   ++    R   R +DLR  T       ++ I    R  +  + F+E  TP + +++
Sbjct: 197 EEGRATVNQDTRLDNRVIDLRTSTSQAVFGLQSGICQLFRDTLTNKGFVEIQTPKIISAA 256

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++  L Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 257 SEGGANVFTVSYFKTSAY--LAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 314

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        D+I +T+  + +G+ E F     TV   F           LR
Sbjct: 315 FVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQTEIQTVCKQFPCEPFKFLEPTLR 374

Query: 277 ICYDDAI---RRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y + +   R  G    D+ DL  P   ++  + +    ++F +  K  L+V P Y
Sbjct: 375 LEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 431



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++    ++ GI  E    +      +F+ G PPH G   
Sbjct: 445 YDMFMRGEEILSGAQRVHDPQLLTDRATHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 500

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 501 GLERVTMLYLGLHNVRQTSMFP 522


>gi|227513353|ref|ZP_03943402.1| asparaginyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227524496|ref|ZP_03954545.1| asparaginyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227083226|gb|EEI18538.1| asparaginyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227088366|gb|EEI23678.1| asparaginyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 426

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 16/244 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73
           V   V++  W+   R  G I FL +RD     Q V    N     FE+AK V+ E  + I
Sbjct: 8   VNEKVKIGVWLTNKRSSGKIAFLQLRDGTAYFQGVVVKNNVSEETFELAKEVKQETSMWI 67

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++   +             E+  + IE++S + E P+     +E+       +R L L
Sbjct: 68  TGIIHEDNRSHFG-------YEIEVESIEVVSESHEYPI---TPKEHGVDFLMDHRHLWL 117

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  +I +       E FI+   PILT S+PEG  D    +  ++ ++  
Sbjct: 118 RSSRPHAVMRIRNEVIKATYDFFNDEGFIKIDAPILTGSAPEGTTDLFHTTYFDKDAY-- 175

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y++   A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L+  
Sbjct: 176 LSQSGQLYEEA-GAEAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLDIQ 234

Query: 254 ENVL 257
           E  +
Sbjct: 235 ERYI 238


>gi|298694745|gb|ADI97967.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 430

 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 120/282 (42%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +      F++AK +  E  L + G +
Sbjct: 16  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVGEEVFKLAKEITQESSLYVTGTI 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++S A + P+     + +       +R L LR   
Sbjct: 76  TEDNRSDLG-------YEMQVKSIEVISEAHDYPIT---PKNHGTEFLMDHRHLWLRSKK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +F  L Q+
Sbjct: 126 QHAVMKIRNEVIRATYEFFSKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183

Query: 198 PQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254
            Q Y +   MA G  + F   P FR E  ++ R   EF+ ++ EM+F    + L   E  
Sbjct: 184 GQLYLEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQY 241

Query: 255 --NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
             +V++ V E           + S    V+  F RI YDDAI
Sbjct: 242 VTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAI 283


>gi|46908129|ref|YP_014518.1| asparaginyl-tRNA synthetase [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47094410|ref|ZP_00232099.1| asparaginyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|226224500|ref|YP_002758607.1| asparaginyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254825609|ref|ZP_05230610.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254852800|ref|ZP_05242148.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254931933|ref|ZP_05265292.1| asparaginyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|254992078|ref|ZP_05274268.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|255521649|ref|ZP_05388886.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300763794|ref|ZP_07073791.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|59798547|sp|Q71YB9|SYN_LISMF RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|46881399|gb|AAT04695.1| asparaginyl-tRNA synthetase [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47017218|gb|EAL08062.1| asparaginyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|225876962|emb|CAS05671.1| Putative asparaginyl-tRNA synthetase [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258606127|gb|EEW18735.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293583485|gb|EFF95517.1| asparaginyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293594852|gb|EFG02613.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300515530|gb|EFK42580.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|328466245|gb|EGF37402.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 1816]
 gi|328473611|gb|EGF44448.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 220]
 gi|332312337|gb|EGJ25432.1| Asparaginyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 430

 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 126/288 (43%), Gaps = 33/288 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDIFATAKALTQETSLYV 71

Query: 74  DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            G        TIN +  +    E++   +E++S + + P+     +E+       +R L 
Sbjct: 72  TG--------TINEDTRSPFGYEMAVSGVEVISESHDYPIT---PKEHGTEFLMDHRHLW 120

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +  H  +  R  II +       E F++   PILT S+PEG  +       ++ +F 
Sbjct: 121 LRSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFDEDAF- 179

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L  
Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQV 237

Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIRR 285
            EN    +++ V +           + S+   +   F RI Y +AI R
Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIER 285


>gi|323358770|ref|YP_004225166.1| aspartyl/asparaginyl-tRNA synthetase [Microbacterium testaceum
           StLB037]
 gi|323275141|dbj|BAJ75286.1| aspartyl/asparaginyl-tRNA synthetase [Microbacterium testaceum
           StLB037]
          Length = 446

 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 130/263 (49%), Gaps = 26/263 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-----------DSACFEIAKSVRSEW 69
           V +SGWV  VR    + F+ +RD  G  Q+V NP           D+A   + +++ +  
Sbjct: 18  VEVSGWVETVRDQKKVQFVVLRDETGAVQLV-NPATRPSEDATDQDAAALALTETIGA-- 74

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L     +  R     +  +  G +E+   ++ +++ A     P+  +   P+  R  YR
Sbjct: 75  -LATGTFLTVRGELKHDERVKLGGVEIKVGEL-VVAAAANPETPIAADSS-PDK-RMDYR 130

Query: 130 FLDLRRDTLHKNIVKR--TRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186
           F+DLR+     N++ R  T + ++MR   +  ++IE  +P L AS  E  A  F VP   
Sbjct: 131 FIDLRQR--RNNLIFRVQTTLEHAMRTYWVERDYIEIHSPKLMASPSESNAELFEVPYFE 188

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE- 245
           ++ ++ A  Q+PQ +KQ+   +GF + F+IAP FR +   + R   EF  +D E+S+++ 
Sbjct: 189 DKTAYLA--QSPQFFKQMAQVAGFGKIFEIAPAFRADPSFTSRHATEFTSIDAEISWIDS 246

Query: 246 QDDILNTMENVLRGVFEEFSNGN 268
            +++    E +L   F+  ++ +
Sbjct: 247 HEEVARMQEELLHTAFQAVADKH 269



 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 4/79 (5%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+ NG EI +G  R H  EV+++     G+  E ++         F+ G PPHGG   
Sbjct: 361 YDLLFNGVEITTGAQREHRVEVLIEQAKEKGLDPEHLDFYLD----FFRFGAPPHGGFGM 416

Query: 542 GIDRIVMLLLGAKNVREVS 560
           G+ R++MLLLG  ++REV+
Sbjct: 417 GLARVLMLLLGESSIREVT 435


>gi|320101107|ref|YP_004176699.1| aspartyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753459|gb|ADV65217.1| aspartyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 420

 Score = 90.9 bits (224), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 17/254 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCIDGLVM 78
           R+ GW+ R +  G ++ +++        VV      +   + + K +     LC +G   
Sbjct: 5   RICGWIIRKKAIGRVVIIEVSSDRVKPYVVVLKEEREPELYAVGKELDVGTALCFEG--- 61

Query: 79  SRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
               E      + G IE  A+KIE+ +   E LP+   G+       R KYR+L L R+ 
Sbjct: 62  ---EEAQEQKSVRG-IEYVARKIEVYAKPIEPLPVDTMGKVPALLDTRIKYRWL-LVRNP 116

Query: 138 LHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           + K I + R+ ++ + R  + +  F E  TP + A+  EG             ++  L Q
Sbjct: 117 VEKAIFRVRSAMLAAAREYLSSNGFTEVQTPKIVAAGAEGGATLFRVQYFENEAY--LSQ 174

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMEN 255
           +PQ +KQ+LMA GF R ++I P FR E   + R   E + +D+E  F+   +D+LNT+EN
Sbjct: 175 SPQLFKQMLMA-GFTRVYEITPYFRAEKYNTTRHLNESWGIDVEQGFINSLEDVLNTLEN 233

Query: 256 VLRGVFEEFSNGNT 269
           ++  + +  S  N 
Sbjct: 234 LVAYIIDYVSRNNA 247



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           ++DL   G EIASGG R H  E +++A    G++       F     AF+ GMPPHGG  
Sbjct: 334 KFDLDYRGLEIASGGQREHRYERLVEALREKGLNP----ASFDFYLEAFKYGMPPHGGFG 389

Query: 541 AGIDRIVMLLLGAKNVREVSLF 562
            G++R++M +LG +NVRE  LF
Sbjct: 390 LGVERLLMRMLGLENVREAILF 411


>gi|16801076|ref|NP_471344.1| asparaginyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|20139892|sp|Q92AB2|SYN_LISIN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|16414511|emb|CAC97240.1| ansB [Listeria innocua Clip11262]
 gi|313618183|gb|EFR90265.1| asparaginyl-tRNA synthetase [Listeria innocua FSL S4-378]
 gi|313623164|gb|EFR93425.1| asparaginyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 430

 Score = 90.9 bits (224), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 126/288 (43%), Gaps = 33/288 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDMFATAKALTQETSLFV 71

Query: 74  DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            G        TIN +  +    E++   +E++S + + P+     +E+       +R L 
Sbjct: 72  TG--------TINEDTRSPFGYEMAVSGVEVISESHDYPIT---PKEHGTEFLMDHRHLW 120

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +  H  +  R  II +       E F++   PILT S+PEG  +       ++ +F 
Sbjct: 121 LRSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFDEDAF- 179

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L  
Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQV 237

Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIRR 285
            EN    +++ V +           + S+   +   F RI Y +AI R
Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIER 285


>gi|16803935|ref|NP_465420.1| asparaginyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47096479|ref|ZP_00234071.1| asparaginyl-tRNA synthetase [Listeria monocytogenes str. 1/2a
           F6854]
 gi|224500248|ref|ZP_03668597.1| asparaginyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|224501304|ref|ZP_03669611.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254827219|ref|ZP_05231906.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254831503|ref|ZP_05236158.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|254899407|ref|ZP_05259331.1| asparaginyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912454|ref|ZP_05262466.1| asparaginyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936781|ref|ZP_05268478.1| asparaginyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284802341|ref|YP_003414206.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995483|ref|YP_003417251.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|20139878|sp|P58695|SYN_LISMO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|16411349|emb|CAC99974.1| ansB [Listeria monocytogenes EGD-e]
 gi|47015132|gb|EAL06073.1| asparaginyl-tRNA synthetase [Listeria monocytogenes str. 1/2a
           F6854]
 gi|258599602|gb|EEW12927.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258609376|gb|EEW21984.1| asparaginyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284057903|gb|ADB68844.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060950|gb|ADB71889.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|293590436|gb|EFF98770.1| asparaginyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 430

 Score = 90.9 bits (224), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 125/288 (43%), Gaps = 33/288 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDIFATAKALTQETSLYV 71

Query: 74  DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            G        TIN +  +    E++   +E++S + + P+     +E+       +R L 
Sbjct: 72  TG--------TINEDTRSPFGYEMAVSSVEVISESHDYPIT---PKEHGTEFLMDHRHLW 120

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +  H  +  R  II +       E F++   PILT S+PEG  +        + +F 
Sbjct: 121 LRSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF- 179

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L  
Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQV 237

Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIRR 285
            EN    +++ V +           + S+   +   F RI Y +AI R
Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIER 285


>gi|242373763|ref|ZP_04819337.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348500|gb|EES40102.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 430

 Score = 90.9 bits (224), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 117/282 (41%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L + G +
Sbjct: 16  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEETFQLAKDITQESSLYVTGTI 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++  A + P+     + +       +R L LR   
Sbjct: 76  TEDNRSDLG-------YEMQVKSIEVIHEAHDYPI---TPKNHGTEFLMDHRHLWLRSKK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  II +       + F +   PILTAS+PEG  +       +Q +F  L Q+
Sbjct: 126 QHAVMKIRNEIIRATYEFFNEKGFTKIDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183

Query: 198 PQQYKQ-LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
            Q Y +   MA G  R F   P FR E  ++ R   EF+ ++ EM+F    + L   E  
Sbjct: 184 GQLYMEAAAMAHG--RVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHAESLEIQEQY 241

Query: 257 ---------------LRGVFEEFSNGNTVSNNFLRICYDDAI 283
                          L+ +  + +    V+  F RI YDDAI
Sbjct: 242 VTHVVQSVLKNCVLELKALDRDTTKLEKVATPFPRISYDDAI 283


>gi|329569957|gb|EGG51712.1| asparagine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 450

 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 121/295 (41%), Gaps = 40/295 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  W+   R  G I FL +RD     Q VV  P+          +  F+  K +
Sbjct: 19  VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQEIKHL 78

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G++   S             E+    +E++  +E+ P+     +E+     
Sbjct: 79  SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 128

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR    H  ++ R+ II +       + FI+  +PILT S+PEG  +      
Sbjct: 129 MDHRHLWLRSSKQHAIMLVRSEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 188

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q +F  L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM++  
Sbjct: 189 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 245

Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284
            ++ L+  E  ++ + +                       VS  F RI YDDAI 
Sbjct: 246 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 300


>gi|226355897|ref|YP_002785637.1| aspartyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226317887|gb|ACO45883.1| putative Aspartate--tRNA ligase (Aspartic acid translase)
           [Deinococcus deserti VCD115]
          Length = 429

 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 21/243 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+L G++H  R  GG+ FL +RD  GI Q V +      E+  S  S  V+   G V
Sbjct: 19  GQTVKLQGFLHARRDLGGVQFLVLRDVSGIAQCVGS----GLELPLSESSVEVV---GSV 71

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEE---LPLPVFGEREYPESIRFKYRFLDLR 134
            +            G  E+  Q   I+S A     + +P       PE++   YR + +R
Sbjct: 72  KAHPK-------APGGYEVQVQSFRIISAATAPTPVEIPKMDWHVNPETM-LDYRVVSVR 123

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
                  +  +  ++ + R  ++ E F E STP + ++  EG  +        Q ++ A 
Sbjct: 124 GLKERAALKVQAELVAAFRDHLMTEGFTEISTPKIVSAGAEGGANLFPIDYFGQPAYLA- 182

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+PQ YKQ+ M   F+R F++AP +R E+  + R   E+  LD+EM F+E ++ +  +E
Sbjct: 183 -QSPQLYKQI-MVGVFERVFEVAPVYRAEEHATSRHLNEYLSLDVEMGFIEDEEDVMALE 240

Query: 255 NVL 257
           N L
Sbjct: 241 NRL 243



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SGG R H   +++++ +   ++ E +     G    F+ GMPPHGG A 
Sbjct: 344 FDLLFRGIEITSGGQRIHDHAMLMESIAAYKLNPETLT----GYTEVFKYGMPPHGGFAI 399

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+   LLG  NVR    FP  ++
Sbjct: 400 GAERLTAKLLGISNVRYARAFPRDRH 425


>gi|332158401|ref|YP_004423680.1| asparaginyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331033864|gb|AEC51676.1| asparaginyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 434

 Score = 90.5 bits (223), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 132/293 (45%), Gaps = 29/293 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSV 65
           C ++     G  V+L+GWV+     G  IFL IRD  GI Q V   +      FE AK +
Sbjct: 7   CEEIKPELDGKRVKLAGWVYTNMRVGKKIFLWIRDSTGIVQTVLAKNVVGEEVFERAKKL 66

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + ++G+V +            G  E+  +K++++    E P+P   ++  PE + 
Sbjct: 67  GRESSVIVEGIVKADER-------APGGAEVHVEKLQVIQAVSEYPIPENPDQASPELL- 118

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             YR L +R   +   +  +  ++ + R  ++ E + E   PIL   + EG         
Sbjct: 119 LDYRHLHIRSPKVSAIMKVKETLMMAAREWLLREGWHEVFPPILVTGAVEGGATLFKLKY 178

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ ++  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E ++++
Sbjct: 179 FDKYAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD 235

Query: 246 QDDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283
             DI+   E ++           R   E F +  T   N    F RI YD+AI
Sbjct: 236 LWDIMKVEEELVSYMVQRTLELRRKEIEMFRDDLTTLKNTEPPFPRISYDEAI 288


>gi|299821670|ref|ZP_07053558.1| asparagine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299817335|gb|EFI84571.1| asparagine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 430

 Score = 90.5 bits (223), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 125/287 (43%), Gaps = 31/287 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F+ AKS+  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGEEIFQAAKSLTQETSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++   +             E++   ++++S + + P+     +E+       +R L L
Sbjct: 72  TGIINEDTRSPFG-------YEIAVSGVKVISESHDFPIT---PKEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +  H  +  R  II +       E FI+   PILT S+PEG  +       ++ +F  
Sbjct: 122 RSNRQHAIMKIRNEIIRASYEFFNNEGFIKIDPPILTGSAPEGTTELFHTKYFDEDAF-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L   
Sbjct: 180 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYQLEDSLKVQ 238

Query: 254 EN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIRR 285
           E     +++ V +           + S   +++  F RI Y +AI +
Sbjct: 239 EQYVAFLVKAVLDNCKLELERLGRDVSVLESMTAPFPRITYTEAIEK 285


>gi|119719757|ref|YP_920252.1| asparaginyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524877|gb|ABL78249.1| asparaginyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 430

 Score = 90.5 bits (223), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 124/281 (44%), Gaps = 28/281 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           GS V + GWV+R R  G   F+ +RD  GI Q V  P+S    +A+ V  E  + + G +
Sbjct: 17  GSQVTVRGWVYRRRDLGDKAFVVVRDSTGIIQAVFTPESPGHALARKVTVESSVIVGGAL 76

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                         G  E++ + IEI+ +AE  P+     RE+      + R L +R   
Sbjct: 77  REDPR-------APGGKEIAGRNIEIVGLAENFPIRRDASREF----LLEVRHLAVRSRK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           +   +  R+ +  ++     +  F E   P+  +++ EG    L P +   GS   L Q+
Sbjct: 126 MTAVLKLRSTVFEALHEWFRSNGFYEVHCPMFISAAVEGGAT-LFPVKYVDGSTVYLTQS 184

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME--- 254
            Q Y + L+ S  ++ + +AP FR E  R+ R   EF+  + E+++   + IL   E   
Sbjct: 185 SQFYLEALIYS-LEKVYTVAPSFRAEKSRTRRHLTEFWHAEAEVAWTGLEGILKVEEELV 243

Query: 255 -NVLRGVFEE-----------FSNGNTVSNNFLRICYDDAI 283
            +++R V E+                 V   F RI YD AI
Sbjct: 244 SHIVRRVLEKNREELELLGRNLEPLKNVEPPFPRISYDKAI 284


>gi|229545213|ref|ZP_04433938.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|229309758|gb|EEN75745.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1322]
          Length = 450

 Score = 90.5 bits (223), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  W+   R  G I FL +RD     Q VV  P+          +  F+  K +
Sbjct: 19  VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIGAFGEEAGTEKFQEIKHL 78

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G++   S             E+    +E++  +E+ P+     +E+     
Sbjct: 79  SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 128

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +      
Sbjct: 129 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 188

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q +F  L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM++  
Sbjct: 189 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 245

Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284
            ++ L+  E  ++ + +                       VS  F RI YDDAI 
Sbjct: 246 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 300


>gi|218884222|ref|YP_002428604.1| aspartyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765838|gb|ACL11237.1| aspartyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 420

 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 17/247 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCIDGLVM 78
           R+ GW+ R +  G II +++        V+      +   F++   +     LC +G   
Sbjct: 5   RICGWIIRKKSIGRIIIIEVSSDSVKPSVLVLKEEREPELFKLGMEIDIGTALCFEGEEA 64

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLDLRRD 136
                      I  +IE+ A+ IE        PLPV    + P  +  R KYR+L +R  
Sbjct: 65  PEQRSARGVEYIARKIEVYAKPIE--------PLPVDTMGKVPALLDTRIKYRWLLVRNP 116

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                 + R  ++N+ R       FIE  TP + A+  EG             ++  L Q
Sbjct: 117 VEKAIFIIRNSLLNAAREYFSKNGFIEVQTPKIVAAGAEGGATLFKIQYFENDAY--LSQ 174

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMEN 255
           +PQ +KQ+LMA GF R ++I P FR E   + R   E + +D+E  F+   +D+L T+EN
Sbjct: 175 SPQLFKQMLMA-GFTRIYEITPYFRAEKYNTTRHLNESWGIDVEQGFINSVEDVLQTLEN 233

Query: 256 VLRGVFE 262
           ++  + E
Sbjct: 234 LITYIIE 240



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 26/154 (16%)

Query: 410 CSFAADARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
            S A D  ++  ++LG I+    +E  +I+ FP+                      G   
Sbjct: 283 ISEAEDLSDYAEKKLGEIMTEKGYELYFIVGFPW-------------------ASTGFYY 323

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++  D +  + F  DL   G EIASGG R H  E +L+A    G++ E     FG    A
Sbjct: 324 MRDEDGVYTRKF--DLDYRGLEIASGGQREHRYEKLLKALREKGLNPE----NFGFYLEA 377

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           F+ GMPPHGG   G++R++M +L  +NVRE  LF
Sbjct: 378 FKYGMPPHGGFGLGVERLLMRMLNLENVREAILF 411


>gi|314933638|ref|ZP_07841003.1| asparagine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653788|gb|EFS17545.1| asparagine--tRNA ligase [Staphylococcus caprae C87]
          Length = 430

 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 116/282 (41%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L + G +
Sbjct: 16  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEETFQLAKEITQESSLYVTGTI 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++  A + P+     + +       +R L LR   
Sbjct: 76  TEDNRSDLG-------YEMQVKSIEVIHEAHDYPI---TPKNHGTEFLMDHRHLWLRSKK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  II +         F +   PILTAS+PEG  +       +Q +F  L Q+
Sbjct: 126 QHAVMKIRNEIIRATYEFFNDNGFTKIDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183

Query: 198 PQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
            Q Y +   MA G  R F   P FR E  ++ R   EF+ ++ EM+F    + L   E  
Sbjct: 184 GQLYMEAAAMADG--RVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHAESLEVQEQY 241

Query: 257 ---------------LRGVFEEFSNGNTVSNNFLRICYDDAI 283
                          L+ +  + +    V+  F RI YDDAI
Sbjct: 242 VTHVVQSVLKNCELELKALDRDTTKLEKVATPFPRISYDDAI 283


>gi|255972158|ref|ZP_05422744.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256617171|ref|ZP_05474017.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256956653|ref|ZP_05560824.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300860825|ref|ZP_07106912.1| asparagine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|255963176|gb|EET95652.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256596698|gb|EEU15874.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256947149|gb|EEU63781.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300849864|gb|EFK77614.1| asparagine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
          Length = 444

 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  W+   R  G I FL +RD     Q VV  P+          +  F+  K +
Sbjct: 13  VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQQIKHL 72

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G++   S             E+    +E++  +E+ P+     +E+     
Sbjct: 73  SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 122

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +      
Sbjct: 123 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 182

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q +F  L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM++  
Sbjct: 183 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 239

Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284
            ++ L+  E  ++ + +                       VS  F RI YDDAI 
Sbjct: 240 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 294


>gi|46202611|ref|ZP_00052922.2| COG0173: Aspartyl-tRNA synthetase [Magnetospirillum
          magnetotacticum MS-1]
          Length = 94

 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 39/78 (50%), Positives = 51/78 (65%)

Query: 1  MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
          MH YR+H+CG L  SD G   RLSGWVHR R HG ++F+D+RDHYG+TQ V +  S  F 
Sbjct: 16 MHVYRSHTCGQLKASDAGIQARLSGWVHRKRDHGNLLFVDLRDHYGLTQCVIDISSPVFA 75

Query: 61 IAKSVRSEWVLCIDGLVM 78
            +  R E V+ + G V+
Sbjct: 76 TLEKARPESVITVTGKVV 93


>gi|255030480|ref|ZP_05302431.1| asparaginyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 363

 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 125/288 (43%), Gaps = 33/288 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDIFATAKALTQETSLYV 71

Query: 74  DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            G        TIN +  +    E++   +E++S + + P+     +E+       +R L 
Sbjct: 72  TG--------TINEDTRSPFGYEMAVSSVEVISESHDYPI---TPKEHGTEFLMDHRHLW 120

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +  H  +  R  II +       E F++   PILT S+PEG  +        + +F 
Sbjct: 121 LRSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF- 179

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L  
Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQV 237

Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIRR 285
            EN    +++ V +           + S+   +   F RI Y +AI R
Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIER 285


>gi|217963952|ref|YP_002349630.1| asparaginyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|217333222|gb|ACK39016.1| asparaginyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307571478|emb|CAR84657.1| asparaginyl-tRNA synthetase [Listeria monocytogenes L99]
          Length = 430

 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 125/288 (43%), Gaps = 33/288 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDIFATAKALTQETSLFV 71

Query: 74  DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            G        TIN +  +    E++   +E++S + + P+     +E+       +R L 
Sbjct: 72  TG--------TINEDTRSPFGYEMAVSGVEVISESHDYPIT---PKEHGTEFLMDHRHLW 120

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +  H  +  R  II +       E F++   PILT S+PEG  +        + +F 
Sbjct: 121 LRSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF- 179

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L  
Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQV 237

Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIRR 285
            EN    +++ V +           + S+   +   F RI Y +AI R
Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIER 285


>gi|229549454|ref|ZP_04438179.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|307277213|ref|ZP_07558317.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|312899799|ref|ZP_07759118.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312953411|ref|ZP_07772251.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|229305691|gb|EEN71687.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|295113406|emb|CBL32043.1| asparaginyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|306506143|gb|EFM75309.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|310628620|gb|EFQ11903.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|311293049|gb|EFQ71605.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315035647|gb|EFT47579.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315146653|gb|EFT90669.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315152079|gb|EFT96095.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315159117|gb|EFU03134.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315170326|gb|EFU14343.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|327535658|gb|AEA94492.1| asparagine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 450

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  W+   R  G I FL +RD     Q VV  P+          +  F+  K +
Sbjct: 19  VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQQIKHL 78

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G++   S             E+    +E++  +E+ P+     +E+     
Sbjct: 79  SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 128

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +      
Sbjct: 129 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 188

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q +F  L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM++  
Sbjct: 189 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 245

Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284
            ++ L+  E  ++ + +                       VS  F RI YDDAI 
Sbjct: 246 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 300


>gi|223043225|ref|ZP_03613272.1| asparaginyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222443436|gb|EEE49534.1| asparaginyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 430

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 116/282 (41%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L + G +
Sbjct: 16  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEETFQLAKEITQESSLYVTGTI 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++  A + P+     + +       +R L LR   
Sbjct: 76  TEDNRSDLG-------YEMQVKSIEVIHEAHDYPI---TPKNHGTEFLMDHRHLWLRSKK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  II +         F +   PILTAS+PEG  +       +Q +F  L Q+
Sbjct: 126 QHAVMKIRNEIIRATYEFFNDNGFTKIDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183

Query: 198 PQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
            Q Y +   MA G  R F   P FR E  ++ R   EF+ ++ EM+F    + L   E  
Sbjct: 184 GQLYMEAAAMAHG--RVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHAESLEVQEQY 241

Query: 257 ---------------LRGVFEEFSNGNTVSNNFLRICYDDAI 283
                          L+ +  + +    V+  F RI YDDAI
Sbjct: 242 VTHVVQSVLKNCELELKALDRDTTKLEKVATPFPRISYDDAI 283


>gi|315282918|ref|ZP_07871218.1| asparaginyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613436|gb|EFR87280.1| asparaginyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 430

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 125/288 (43%), Gaps = 33/288 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDIFATAKALTQETSLFV 71

Query: 74  DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            G        TIN +  +    E++   +E++S + + P+     +E+       +R L 
Sbjct: 72  TG--------TINEDTRSPFGYEMAVSGVEVISESHDYPIT---PKEHGTEFLMDHRHLW 120

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +  H  +  R  II +       E F++   PILT S+PEG  +        + +F 
Sbjct: 121 LRSNRQHAIMKIRNEIIRASYEFFNQEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF- 179

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L  
Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQV 237

Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIRR 285
            EN    +++ V +           + S+   +   F RI Y +AI R
Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIER 285


>gi|257869635|ref|ZP_05649288.1| asparaginyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257803799|gb|EEV32621.1| asparaginyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 432

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 121/291 (41%), Gaps = 42/291 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANP-DSACFEIAKSVRSEWVLCI 73
           VG  V++  WV   R  G I FL +RD     Q  VV N      F++AK++  E  + +
Sbjct: 13  VGETVQIGAWVANKRSSGKIAFLQLRDGTAYFQGIVVKNEVGEEVFQLAKNLNQETAVLV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   S             E+    IE++  + E P+     +E+       +R L L
Sbjct: 73  TGEIREDSRSKFG-------YEIGISGIEVVGESHEYPIT---PKEHGTDFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  +I +         FI+   PILT S+PEG  D    +  +Q ++  
Sbjct: 123 RSSKQHAIMQIRNEVIRATYEFFNNNGFIKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L   
Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLEVQ 239

Query: 254 ENVL---------------------RGVFEEFSNGNTVSNNFLRICYDDAI 283
           E  +                     R + E+++        F RI YDDA+
Sbjct: 240 EQYVAFLVQSVLDNCDYALDVLGRDRAILEKYTK-----LPFPRISYDDAV 285



 Score = 38.1 bits (87), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 4/74 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E +L+   N G+     EN +       + G  PH G   G++R V  
Sbjct: 355 EIIGGSERATDYEFLLEQIRNHGLD----ENEYSWYLDLRKYGSVPHTGFGLGLERTVTW 410

Query: 550 LLGAKNVREVSLFP 563
           L G ++VRE   FP
Sbjct: 411 LSGIEHVREAIPFP 424


>gi|315155305|gb|EFT99321.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0043]
          Length = 450

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  W+   R  G I FL +RD     Q VV  P+          +  F+  K +
Sbjct: 19  VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEETGTEKFQEIKHL 78

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G++   S             E+    +E++  +E+ P+     +E+     
Sbjct: 79  SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 128

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +      
Sbjct: 129 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 188

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q +F  L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM++  
Sbjct: 189 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 245

Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284
            ++ L+  E  ++ + +                       VS  F RI YDDAI 
Sbjct: 246 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 300


>gi|255975222|ref|ZP_05425808.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256763066|ref|ZP_05503646.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256963547|ref|ZP_05567718.1| asparaginyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257079579|ref|ZP_05573940.1| asparaginyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257087403|ref|ZP_05581764.1| asparaginyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257090537|ref|ZP_05584898.1| asparaginyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257419830|ref|ZP_05596824.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|294779456|ref|ZP_06744854.1| asparagine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|255968094|gb|EET98716.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256684317|gb|EEU24012.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256954043|gb|EEU70675.1| asparaginyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256987609|gb|EEU74911.1| asparaginyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256995433|gb|EEU82735.1| asparaginyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256999349|gb|EEU85869.1| asparaginyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257161658|gb|EEU91618.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|294453462|gb|EFG21866.1| asparagine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|323481329|gb|ADX80768.1| asparaginyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 444

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  W+   R  G I FL +RD     Q VV  P+          +  F+  K +
Sbjct: 13  VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQEIKHL 72

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G++   S             E+    +E++  +E+ P+     +E+     
Sbjct: 73  SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 122

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +      
Sbjct: 123 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 182

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q +F  L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM++  
Sbjct: 183 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 239

Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284
            ++ L+  E  ++ + +                       VS  F RI YDDAI 
Sbjct: 240 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 294


>gi|29376869|ref|NP_816023.1| asparaginyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227519904|ref|ZP_03949953.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227553908|ref|ZP_03983955.1| asparaginyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|257084665|ref|ZP_05579026.1| asparaginyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|307270869|ref|ZP_07552156.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307271487|ref|ZP_07552759.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307285841|ref|ZP_07565975.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307287739|ref|ZP_07567782.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|312903710|ref|ZP_07762884.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|38258305|sp|Q831X4|SYN_ENTFA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|29344334|gb|AAO82093.1| asparaginyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227072698|gb|EEI10661.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227176967|gb|EEI57939.1| asparaginyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|256992695|gb|EEU79997.1| asparaginyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|306501477|gb|EFM70780.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306502602|gb|EFM71869.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306511759|gb|EFM80757.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306512782|gb|EFM81427.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310632902|gb|EFQ16185.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315025447|gb|EFT37379.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315032867|gb|EFT44799.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315146020|gb|EFT90036.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315150177|gb|EFT94193.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315161738|gb|EFU05755.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315164838|gb|EFU08855.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315173639|gb|EFU17656.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315574391|gb|EFU86582.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315578688|gb|EFU90879.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|315580135|gb|EFU92326.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 450

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  W+   R  G I FL +RD     Q VV  P+          +  F+  K +
Sbjct: 19  VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQEIKHL 78

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G++   S             E+    +E++  +E+ P+     +E+     
Sbjct: 79  SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 128

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +      
Sbjct: 129 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 188

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q +F  L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM++  
Sbjct: 189 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 245

Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284
            ++ L+  E  ++ + +                       VS  F RI YDDAI 
Sbjct: 246 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 300


>gi|332814503|ref|XP_003309311.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic [Pan troglodytes]
          Length = 401

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 140/305 (45%), Gaps = 45/305 (14%)

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV---- 114
           + A ++  E ++ I+G+V  R       +     +EL  QKI ++S+AE  LPL +    
Sbjct: 3   KFAANINKESIVDIEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAV 60

Query: 115 --------FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                    G     +  R   R +DLR  T       ++ I +  R  +I + F+E  T
Sbjct: 61  RPEAEGEEEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQT 120

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P + +++ EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  
Sbjct: 121 PKIISAASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSN 178

Query: 227 SDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF------ 274
           + R   EF  LD+EM+F        ++I +TM  + +G+ E F     TV+  F      
Sbjct: 179 THRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFK 238

Query: 275 -----LRICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LS 319
                LR+ Y +A   +R  G    D+ DL  P   ++ H V E +  ++F +  K  L+
Sbjct: 239 FLEPTLRLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLA 297

Query: 320 VNPGY 324
           V P Y
Sbjct: 298 VRPFY 302



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 316 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 371

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 372 GLERVTMLFLGLHNVRQTSMFP 393


>gi|77917544|ref|NP_001030093.1| probable asparaginyl-tRNA synthetase, mitochondrial [Rattus
           norvegicus]
 gi|74356254|gb|AAI04692.1| Asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) [Rattus
           norvegicus]
          Length = 391

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 136/307 (44%), Gaps = 48/307 (15%)

Query: 12  LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVR 66
           LGV D  G  V + GW+  VR    ++FL + D   +   QVVA+   DS       SV+
Sbjct: 34  LGVQDASGECVTVQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSSFDSRELAFGSSVQ 93

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                 + G ++   ++  N       +EL A+KIE++   E    P+  +  +P     
Sbjct: 94  ------VQGQLVKSQSKRQN-------VELKAEKIEVVGTCEAKAFPIKYKERHPLEYLR 140

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS 184
           +Y  L  R + L   +  R+    ++        F+   TP+LT++  EGA +   + PS
Sbjct: 141 QYPHLRCRTNALGSILRVRSEATAAIHSYFKDNGFMHIHTPVLTSNDCEGAGELFQVEPS 200

Query: 185 ---RVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
              +V + +F+ +P       QL   +M+  F + F   P FR E+ +S R   EFY ++
Sbjct: 201 SKIKVPEENFFDVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVE 260

Query: 239 MEMSFVEQ-DDILNTMENVLRGVFEE---------------FSNG------NTVSNNFLR 276
            E+SFVE   D++  ME + +   E                 ++G      + + NNFL 
Sbjct: 261 AEVSFVESLQDLMQVMEGLFKATTEMVLSHCPEDVELCHQFIASGQKDRLEHMLKNNFLI 320

Query: 277 ICYDDAI 283
           I Y +AI
Sbjct: 321 ISYAEAI 327


>gi|293383609|ref|ZP_06629519.1| asparagine--tRNA ligase [Enterococcus faecalis R712]
 gi|293387278|ref|ZP_06631835.1| asparagine--tRNA ligase [Enterococcus faecalis S613]
 gi|312906159|ref|ZP_07765171.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312909504|ref|ZP_07768359.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|291079121|gb|EFE16485.1| asparagine--tRNA ligase [Enterococcus faecalis R712]
 gi|291083315|gb|EFE20278.1| asparagine--tRNA ligase [Enterococcus faecalis S613]
 gi|310627805|gb|EFQ11088.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311290177|gb|EFQ68733.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
          Length = 450

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  W+   R  G I FL +RD     Q VV  P+          +  F+  K +
Sbjct: 19  VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEVFGEEAGTEKFQEIKHL 78

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G++   S             E+    +E++  +E+ P+     +E+     
Sbjct: 79  SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 128

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +      
Sbjct: 129 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 188

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q +F  L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM++  
Sbjct: 189 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 245

Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284
            ++ L+  E  ++ + +                       VS  F RI YDDAI 
Sbjct: 246 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 300


>gi|257082040|ref|ZP_05576401.1| asparaginyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256990070|gb|EEU77372.1| asparaginyl-tRNA synthetase [Enterococcus faecalis E1Sol]
          Length = 450

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  W+   R  G I FL +RD     Q VV  P+          +  F+  K +
Sbjct: 19  VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQEIKHL 78

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G++   S             E+    +E++  +E+ P+     +E+     
Sbjct: 79  SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 128

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +      
Sbjct: 129 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 188

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q +F  L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM++  
Sbjct: 189 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 245

Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284
            ++ L+  E  ++ + +                       VS  F RI YDDAI 
Sbjct: 246 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 300


>gi|257416582|ref|ZP_05593576.1| asparaginyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257421983|ref|ZP_05598973.1| asparaginyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|257158410|gb|EEU88370.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|257163807|gb|EEU93767.1| asparaginyl-tRNA synthetase [Enterococcus faecalis X98]
          Length = 444

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  W+   R  G I FL +RD     Q VV  P+          +  F+  K +
Sbjct: 13  VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEETGTEKFQEIKHL 72

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G++   S             E+    +E++  +E+ P+     +E+     
Sbjct: 73  SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 122

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +      
Sbjct: 123 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 182

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q +F  L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM++  
Sbjct: 183 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 239

Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284
            ++ L+  E  ++ + +                       VS  F RI YDDAI 
Sbjct: 240 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 294


>gi|256961324|ref|ZP_05565495.1| asparaginyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256951820|gb|EEU68452.1| asparaginyl-tRNA synthetase [Enterococcus faecalis Merz96]
          Length = 444

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  W+   R  G I FL +RD     Q VV  P+          +  F+  K +
Sbjct: 13  VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEVFGEEAGTEKFQEIKHL 72

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G++   S             E+    +E++  +E+ P+     +E+     
Sbjct: 73  SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 122

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +      
Sbjct: 123 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 182

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q +F  L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM++  
Sbjct: 183 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 239

Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284
            ++ L+  E  ++ + +                       VS  F RI YDDAI 
Sbjct: 240 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIE 294


>gi|50954026|ref|YP_061314.1| aspartyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50950508|gb|AAT88209.1| aspartyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 425

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 19/248 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-----V 77
           ++GWV  VR    + F+ +RD  G  Q+V NP +   E       E  L + GL     V
Sbjct: 3   VAGWVETVRDQKKVQFVVLRDESGAVQLV-NPRTVN-EDGTVAADEPALTVSGLSQGSFV 60

Query: 78  MSRSAETINANIITGQIE--LSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            +      +  +  G IE  LSA  +E  ++ E    P+  +    +  R  +RFLDLR 
Sbjct: 61  RATGELKHDERVKLGGIEIKLSALDVETAAIPE---TPIAADSGIDK--RMDWRFLDLR- 114

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           +  H  I + +T   N++R   +   FIE  TP L AS+ E   +          ++  L
Sbjct: 115 EPKHNLIFRVQTTFENALRHYWVDNGFIEIHTPKLMASASESRAELFELPYFETTAY--L 172

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTM 253
            Q+PQ +KQ+  A+GF + F+I P FR +   + R   EF  +D E+S++E  +D++   
Sbjct: 173 AQSPQIFKQMAQAAGFGKVFEIGPAFRADPSFTSRHATEFTSVDTEISWIESHEDVMKVH 232

Query: 254 ENVLRGVF 261
           E++L   F
Sbjct: 233 EDLLVAGF 240



 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 4/79 (5%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+ NG EI++G  R H  E + Q     G+S E +E+    +   F+ G+PPHGG   
Sbjct: 340 YDLIFNGVEISTGAQREHRVETIEQQAREKGLSVEELED----VLAFFRYGVPPHGGFGM 395

Query: 542 GIDRIVMLLLGAKNVREVS 560
           G+ R++ML+L   N+RE +
Sbjct: 396 GLARVLMLMLHLSNLRETT 414


>gi|242242735|ref|ZP_04797180.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233871|gb|EES36183.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|319400806|gb|EFV89025.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 430

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 115/282 (40%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L I G +
Sbjct: 16  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEETFQLAKDITQESSLYITGTI 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IEI+  A + P+     + +       +R L LR   
Sbjct: 76  TEDNRSDLG-------YEMQVKSIEIVHEAHDYPI---TPKNHGTEFLMDHRHLWLRSKK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  II +         F +   PILTAS+PEG  +       ++ +F  L Q+
Sbjct: 126 QHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDEDAF--LSQS 183

Query: 198 PQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
            Q Y +   MA G  R F   P FR E  ++ R   EF+ ++ EM+F    + L   E  
Sbjct: 184 GQLYMEAAAMAHG--RVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHAESLEIQEQY 241

Query: 257 LRGVFEEFSNG---------------NTVSNNFLRICYDDAI 283
           +  + +   N                  V+  F RI YDDAI
Sbjct: 242 VSHIVQSVLNHCQLELKALDRDTTKLEKVATPFPRISYDDAI 283


>gi|27468060|ref|NP_764697.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57866954|ref|YP_188601.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251810882|ref|ZP_04825355.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876112|ref|ZP_06284979.1| asparagine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|293366577|ref|ZP_06613254.1| asparagine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258361|sp|Q8CSI9|SYN_STAES RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|81674545|sp|Q5HP89|SYN_STAEQ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|27315605|gb|AAO04739.1|AE016747_236 asparaginyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57637612|gb|AAW54400.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251805562|gb|EES58219.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295137|gb|EFA87664.1| asparagine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|291319346|gb|EFE59715.1| asparagine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329725417|gb|EGG61900.1| asparagine--tRNA ligase [Staphylococcus epidermidis VCU144]
 gi|329735367|gb|EGG71659.1| asparagine--tRNA ligase [Staphylococcus epidermidis VCU045]
 gi|329737271|gb|EGG73525.1| asparagine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 430

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 115/282 (40%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L I G +
Sbjct: 16  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEETFQLAKDITQESSLYITGTI 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IEI+  A + P+     + +       +R L LR   
Sbjct: 76  TEDNRSDLG-------YEMQVKSIEIVHEAHDYPI---TPKNHGTEFLMDHRHLWLRSKK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  II +         F +   PILTAS+PEG  +       ++ +F  L Q+
Sbjct: 126 QHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDEDAF--LSQS 183

Query: 198 PQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
            Q Y +   MA G  R F   P FR E  ++ R   EF+ ++ EM+F    + L   E  
Sbjct: 184 GQLYMEAAAMAHG--RVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHAESLEIQEQY 241

Query: 257 LRGVFEEFSNG---------------NTVSNNFLRICYDDAI 283
           +  + +   N                  V+  F RI YDDAI
Sbjct: 242 VSHIVQSVLNHCQLELKALDRDTTKLEKVATPFPRISYDDAI 283


>gi|297624293|ref|YP_003705727.1| aspartyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165473|gb|ADI15184.1| aspartyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 435

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 128/264 (48%), Gaps = 23/264 (8%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H   DL  + +G  V L GWV+  R  GGI FL +RD  G+ Q V         +A+S  
Sbjct: 15  HLISDLPEA-LGQTVTLQGWVYSRRDLGGIRFLLLRDRSGVVQCVFG--KTELPLAES-- 69

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP---LPVFGEREYPES 123
                C+   V  R AE+  A    G +E+ A+ +E+++ A E P   +P       P++
Sbjct: 70  -----CVR--VTGRVAESPKA---PGGLEVHAEALELITNAAEPPPIEIPKEAWHVNPDT 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +  +YR + LR       +  +  ++ + R  + AE F E  TP L A+  EG       
Sbjct: 120 L-LEYRHVSLRSPKARAALKVQAELVRAFREVLSAEGFTEIFTPKLVAAGAEGGAALFEV 178

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++ A  Q+PQ YKQ+ M   F+R F++AP +R E   + R   E+  LD+E+ F
Sbjct: 179 DYYGKRAYLA--QSPQLYKQI-MVGVFERVFEVAPVYRAELSHTSRHLSEYLSLDVELGF 235

Query: 244 VEQD-DILNTMENVLRGVFEEFSN 266
           ++ D D++   E +L+ +  + + 
Sbjct: 236 IDSDEDVMALEERLLKAMMRDVAE 259



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 55/121 (45%), Gaps = 10/121 (8%)

Query: 445 WNEEEKKIDFAHNPFTMPQGGME--SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           W +EE+  DF       PQ      +   +D L+     +DL+  G EI SGG R H   
Sbjct: 315 WAKEERGSDFVFV-TNYPQAARPFYTYPTDDGLTRG---FDLLFRGVEITSGGQRVHEYG 370

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            ++       +  E     F G    F+ GMPPHGG A G +R+  LLLG  NVR    F
Sbjct: 371 TLIAQLRARNLDPEA----FRGYLEVFKYGMPPHGGFAIGAERLTALLLGIANVRFARAF 426

Query: 563 P 563
           P
Sbjct: 427 P 427


>gi|116873331|ref|YP_850112.1| asparaginyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123461236|sp|A0AK01|SYN_LISW6 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116742209|emb|CAK21333.1| asparaginyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 430

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 125/288 (43%), Gaps = 33/288 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDMFASAKALTQETSLYV 71

Query: 74  DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            G        TIN +  +    E++   +E++S + + P+     +E+       +R L 
Sbjct: 72  TG--------TINEDTRSPFGYEMAVSGVEVISESHDYPIT---PKEHGTEFLMDHRHLW 120

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +  H  +  R  II +       E F++   PILT S+PEG  +        + +F 
Sbjct: 121 LRSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF- 179

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L  
Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQV 237

Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIRR 285
            EN    +++ V +           + S+   +   F RI Y +AI R
Sbjct: 238 QENYVAYLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIER 285


>gi|239636872|ref|ZP_04677871.1| asparaginyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239597546|gb|EEQ80044.1| asparaginyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|330685007|gb|EGG96682.1| asparagine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 430

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 117/283 (41%), Gaps = 33/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F ++K +  E  L + G +
Sbjct: 16  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEDVFNLSKEITQESSLYVTGTI 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++  A + P+     + +       +R L LR   
Sbjct: 76  TEDNRSDLG-------YEMQVKSIEVIHEAHDYPI---TPKNHGTEFLMDHRHLWLRSKK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  II +         F +   PILTAS+PEG  +       ++ +F  L Q+
Sbjct: 126 QHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDEDAF--LSQS 183

Query: 198 PQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
            Q Y +   MA G  R F   P FR E  ++ R   EF+ ++ EM+F E  + L   E  
Sbjct: 184 GQLYMEAAAMAHG--RVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTEHAESLEVQEQY 241

Query: 257 ---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284
                          L+ +  + S    V+  F RI YDDA++
Sbjct: 242 VAHVVQSVLKNCQLELKALDRDTSKLEKVAAPFPRITYDDAVK 284


>gi|327440744|dbj|BAK17109.1| aspartyl/asparaginyl-tRNA synthetase [Solibacillus silvestris
           StLB046]
          Length = 431

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 118/285 (41%), Gaps = 31/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73
           +G  V++  W+   R  G + FL +RD  G  Q V   +      F +AK +  E  + +
Sbjct: 13  IGETVKIGTWLANKRSSGKLAFLQLRDGSGFAQGVVVKEEVGEELFAVAKGMTQETSMYV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V +    +  A       EL+   IE++S A++ P+     +E+        R L L
Sbjct: 73  IGEVKADERSSFGA-------ELNVTGIEVISPAKDYPI---TPKEHGTEFLMDNRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +         F +   PILT SSPEG  +       ++ +F  
Sbjct: 123 RSRKQHAIMKVRNEIIRATYEFFNENGFTKMDPPILTGSSPEGTSELFHTKYFDEDAF-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE D+ L   
Sbjct: 181 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEHDESLEVQ 239

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283
           E  +  + +               + S    V   F RI YD AI
Sbjct: 240 EQYVSHIVQSVLKNCKLDLERLGRDTSKLENVKAPFPRISYDQAI 284


>gi|323489716|ref|ZP_08094943.1| asparaginyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396847|gb|EGA89666.1| asparaginyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 431

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 114/285 (40%), Gaps = 31/285 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCID 74
           G  ++L  W+   R  G I FL +RD  G  Q   V A      F  AK +  E  + + 
Sbjct: 14  GETIKLGAWIANKRSSGKIAFLQLRDGSGFVQGVVVKAEVGDDLFATAKGLTQETSVYVT 73

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V                 EL+   IE++  A++ P+     +E+        R L LR
Sbjct: 74  GEVKEDERSAFG-------YELAVTGIEVIHEAKDFPIT---PKEHGTEFLMDNRHLWLR 123

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
               H  +  R  II S         F++   PILT SSPEG  +       ++ ++  L
Sbjct: 124 SRKQHAIMKIRNEIIRSTYEFFNDNGFVKVDPPILTGSSPEGTSELFATKYFDEDAY--L 181

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F+E  + L   E
Sbjct: 182 SQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFIEHVESLEVQE 240

Query: 255 NVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284
             +  + +               + S    +   F R+ YDDAI+
Sbjct: 241 QYVSYIVQSVLKNCKLELERLDRDVSKLEKIKAPFPRVSYDDAIK 285


>gi|150391128|ref|YP_001321177.1| aspartyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149950990|gb|ABR49518.1| aspartyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 432

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 124/257 (48%), Gaps = 20/257 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R R    G+     + S V L GWVH+++      F+ +RD  GI Q+V + +    E
Sbjct: 3   MKRIRIQELGE----QIQSEVLLKGWVHKIKNFSQFAFVLLRDKTGIVQLVLDDE----E 54

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGERE 119
           + K ++ E  + ++G V+      +N     G +I++   +    +  + LP  +  +R+
Sbjct: 55  MIKGLKLEMAVEVEGKVV------VNKTTPEGVEIQVKNMRTVGKTYYDLLPFSI-NQRQ 107

Query: 120 YPESI--RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
              ++  +  +R + LRR         +  I+ S R  +    F E  TP + AS  EG 
Sbjct: 108 MNAALETQLDHRSISLRRPNKRAVFKVQEEIVESFRNYLRGLGFSEIHTPKIVASGTEGG 167

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +    +  ++ +F  L Q+PQ YKQ+++ +GF+  F+I   +R E   + R   E+  L
Sbjct: 168 SEVFTVNYFDRRAF--LAQSPQFYKQMMVGAGFEAVFEIGHAYRAELHNTWRHLNEYVSL 225

Query: 238 DMEMSFVEQDDILNTME 254
           D+E+ F+E ++ L  +E
Sbjct: 226 DIEIGFIENEEELMDLE 242



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 22/133 (16%)

Query: 444 EWNEEEKKIDF--------AHNP-FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
           ++ +E+ K DF        A  P +TMP    E +  +         +DL+  G EI +G
Sbjct: 309 QYIKEKYKSDFVFITKYPAAKRPMYTMPDDKGEGMTKS---------FDLIYKGLEITTG 359

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           G R H  +++ +     G + E     F      F+ GMPPHGG A G++R+ M +L  +
Sbjct: 360 GQRIHDYQMLKENIIKFGSNPE----DFDFYLETFKYGMPPHGGFAIGLERLTMKILDLE 415

Query: 555 NVREVSLFPMSQN 567
           N+RE +LFP   N
Sbjct: 416 NIREATLFPRDLN 428


>gi|51491207|emb|CAH18669.1| hypothetical protein [Homo sapiens]
          Length = 401

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 45/305 (14%)

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV---- 114
           + A ++  E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL +    
Sbjct: 3   KFAANINKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAV 60

Query: 115 --------FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                    G     +  R   R +DLR  T       ++ I +  R  +I + F+E  T
Sbjct: 61  RPEAEGEEEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQT 120

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P + +++ EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  
Sbjct: 121 PKIISAASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSN 178

Query: 227 SDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF------ 274
           + R   EF  LD+EM+F        ++I +TM  + +G+ E F     TV+  F      
Sbjct: 179 THRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFK 238

Query: 275 -----LRICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LS 319
                LR+ Y +A   +R  G    D+ DL  P   ++ H V E +  ++F +  K  L+
Sbjct: 239 FLEPTLRLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLA 297

Query: 320 VNPGY 324
           V P Y
Sbjct: 298 VRPFY 302



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 316 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 371

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 372 GLERVTMLFLGLHNVRQTSMFP 393


>gi|289435245|ref|YP_003465117.1| asparaginyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171489|emb|CBH28033.1| asparaginyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 430

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 124/286 (43%), Gaps = 33/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGEEVFAAAKALTQETSLFV 71

Query: 74  DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            G        TIN +  +    E++   +E++S + + P+     +E+       +R L 
Sbjct: 72  TG--------TINEDTRSPFGYEMAVSGVEVISESHDYPIT---PKEHGTEFLMDHRHLW 120

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +  H  +  R  II +       E F++   PILT S+PEG  +        + +F 
Sbjct: 121 LRSNRQHAIMKIRNEIIRATYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF- 179

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L  
Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLKV 237

Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
            EN    +++ V +           + S+   +   F RI Y +AI
Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDISHLEKMVAPFPRITYTEAI 283


>gi|282163156|ref|YP_003355541.1| asparaginyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155470|dbj|BAI60558.1| asparaginyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 431

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 130/292 (44%), Gaps = 34/292 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---IAKSVRSEWVLCID 74
           G  V + GWV + R  G I+F  IRD  G  QV A   + C E   +A ++  E  + + 
Sbjct: 16  GEEVEVGGWVVKNRSSGKIVFTLIRDATGEMQVTARKGNVCDEALKVADALSLECSIIVK 75

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V S            G  ELSA  ++++  + +   P+FGE E+   +    R LD+R
Sbjct: 76  GKVRSDPR-------APGGKELSATDLKLIGASRD--YPIFGEEEHNPEVLLDLRHLDVR 126

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
              L   +  +  ++++ R       F E + PI+ +S+ EG             ++  L
Sbjct: 127 SKQLVAIMKVKDSVLSAAREWFRNHEFFEVTPPIIISSACEGGSTLFELKYFEDKAY--L 184

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y + L+  G ++ + I P FR E  R+ R   E++ ++ EM+++   ++++ +E
Sbjct: 185 SQSAQLYLESLIF-GLEKVYSITPSFRAEKSRTTRHLAEYWHIEGEMAWMGLYEMIDMLE 243

Query: 255 NV-----------------LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            +                 L G   E+  G  +   F RI YD+A++    D
Sbjct: 244 QLVCYVCNRVGEERAEEIRLVGGDPEYFKG--LKAPFPRITYDEAVKVLQAD 293


>gi|326692528|ref|ZP_08229533.1| asparaginyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 439

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 123/287 (42%), Gaps = 32/287 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SACFEIAKSVRSEWVLCI 73
           VG  V++  W+ + R  G + FL +RD     Q VVA  D   + FE+AK ++ E  L +
Sbjct: 21  VGQTVKIGAWLRQKRGSGKLAFLQLRDGTAFFQAVVAKVDVPESVFELAKGLKQETSLYV 80

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +  +          E++   IE++  + + P+     +E+     F  R L L
Sbjct: 81  TGEIREDARSSFG-------YEMAVSDIEVIGESHDYPIT---PKEHGTDFLFDERHLYL 130

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +I +       E F++  +P+LT S+PEG  +        + ++  
Sbjct: 131 RHLKPFATLKIRNTLIAATYEFFNNEGFVKLDSPLLTGSAPEGTTELFETDYFGESAY-- 188

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L   
Sbjct: 189 LSQTGQLYAEA-GAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMVEPEMAFMHQEESLELQ 247

Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIR 284
           E  +  +  +    N    + L                RI YDDA++
Sbjct: 248 ERYISFLISKVLERNEQELDILGRDKSLLASYTELPYPRISYDDAVK 294


>gi|219848798|ref|YP_002463231.1| asparaginyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|254782876|sp|B8GBG7|SYN_CHLAD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|219543057|gb|ACL24795.1| asparaginyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 440

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 126/285 (44%), Gaps = 30/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73
           VG  V L+GWV+     G +IF+ +RD  G  Q V    N   A F  A+++  E    I
Sbjct: 16  VGQRVTLAGWVYHKTEKGKLIFILLRDGSGTIQCVTFKKNVSEATFATAQALTQESSCRI 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V  R+ E        G  EL  ++IE++  + E P+     +E+      ++R L +
Sbjct: 76  TGSV--RADER-----APGGYELDVEEIELVGPSHEYPI---TPKEHGVEFLMEHRHLWV 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  +I + +  +  + F+   TPILTA++ EG  +       + G  Y 
Sbjct: 126 RSAKQHAILRIRAEVIAAAQEWLNEQGFVRFDTPILTATAAEGTTNLFATDYFDLGKAY- 184

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD----- 248
           L Q  Q Y +  M S F + +   P FR E  ++ R   EF+ ++ E++F + +D     
Sbjct: 185 LAQTGQLYVEAGMMS-FGKVYCFGPTFRAEKSKTRRHLTEFWMIEPEVAFADHEDNMRLQ 243

Query: 249 ----------ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
                     +L+     L+ +  + S    V   F RI YD AI
Sbjct: 244 EQFVSAIVARVLDRRREDLKVLERDISLLEQVVPPFPRITYDQAI 288


>gi|302348210|ref|YP_003815848.1| Asparaginyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328622|gb|ADL18817.1| Asparaginyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 432

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 141/295 (47%), Gaps = 31/295 (10%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAKSVR 66
           S  ++  S  GS V+L GWV+R R     IF+ +RD  GI Q VV   +    + A+ V 
Sbjct: 8   SSREVVASSEGSRVKLRGWVYRKRDLSSKIFIVVRDSEGIVQCVVDRSNEELSKAAEKVT 67

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  + ++G+V S            G  E++ +++ I+ +A++ P+      +Y   I  
Sbjct: 68  IESSVEVEGVVRSDQR-------APGGKEVNVERLNIVGLADDFPIKGGESVDYLLDI-- 118

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR   L + +  R  ++ ++R   I+  + E S PILT S+ EG          
Sbjct: 119 --RHLWLRSRRLTQIMRIRATVLEALRNYFISNGWWEVSPPILTQSAVEGGATLFPVDFF 176

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            + ++  L Q+ Q Y ++++ S  +R + + P FR E  R+ R   E++ L+ E ++++ 
Sbjct: 177 GRKAY--LSQSAQFYLEVMIFS-LERVWSLTPSFRAERSRTRRHLYEYWHLEGEAAWMDM 233

Query: 247 DDILNTMENVLRGVFE----------EFSNGN------TVSNNFLRICYDDAIRR 285
            D++  +E +++   +          +F   N      T+ ++F  + YD+AI R
Sbjct: 234 HDMMKFVEGLVKSAVKAVLDKRQEELQFLRRNQEPLEETLKSSFEEVTYDEAIER 288


>gi|329770483|ref|ZP_08261861.1| asparaginyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328836232|gb|EGF85901.1| asparaginyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 428

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 121/286 (42%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR---SEWVLCI 73
           +G  V L  W+   R  G I F  +R   G  Q VA  +S   E  + +R    E  + +
Sbjct: 10  LGKTVTLGAWIANKRSSGKIAFFQLRYGTGFIQAVALKESLGEERYQQLRHLPQESSIKV 69

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            GLV     E      ++G IEL  Q  E++S A + P+     +E+        R + +
Sbjct: 70  TGLVKENDRE------LSG-IELEIQDFEVVSEAIDYPIT---PKEHGVEFLADNRHIWI 119

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R +II S       E FI+   PILT+S+PEG  +       ++ ++  
Sbjct: 120 RSKKQHAILTIRNQIIKSTYDFFEKEGFIKTDPPILTSSAPEGTTELFNTKYFDEEAY-- 177

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  + S F + F   P FR E  ++ R   EF+ ++ EM+F   D+ L   
Sbjct: 178 LSQSGQLYLEATVMS-FGKVFSFGPTFRAEKSKTRRHLIEFWMIEAEMAFCNHDESLAIQ 236

Query: 254 ENVLRGVFEE---------------FSNGNTVSNNFLRICYDDAIR 284
           E  +  +  E                 + N     F RI Y DAI+
Sbjct: 237 EAYVNYLLTEVIEKCQEQLKILGRDLESLNAARGEFPRIKYKDAIK 282


>gi|313637223|gb|EFS02737.1| asparaginyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 430

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 124/286 (43%), Gaps = 33/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGEEVFATAKALTQETSLFV 71

Query: 74  DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            G        TIN +  +    E++   +E++S + + P+     +E+       +R L 
Sbjct: 72  TG--------TINEDTRSPFGYEMAVSGLEVISESHDYPIT---PKEHGTEFLMDHRHLW 120

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +  H  +  R  II +       E F++   PILT S+PEG  +        + +F 
Sbjct: 121 LRSNRQHAIMKIRNEIIRATYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF- 179

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L  
Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLKV 237

Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
            EN    +++ V +           + S+   +   F RI Y +AI
Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDISHLEKMVAPFPRITYTEAI 283


>gi|156740890|ref|YP_001431019.1| asparaginyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|189083276|sp|A7NHQ4|SYN_ROSCS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|156232218|gb|ABU57001.1| asparaginyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 440

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 127/294 (43%), Gaps = 36/294 (12%)

Query: 14  VSDV----GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           +SD+    G  V L+GWV      G ++F+ +RD  G+ Q        C    K+V  E 
Sbjct: 9   ISDIARHNGRVVTLAGWVAHKTEKGKLVFIRLRDGSGVMQ--------CVVFRKNVAEET 60

Query: 70  VLCIDGLVMSRSAE---TINAN-IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +    L +  S     T+ A+    G  EL    IEI+ +A E P+     +E+     
Sbjct: 61  FIAAQRLTLESSCRITGTVRADERAPGGFELDVNGIEIIQIAPEYPI---QPKEHGVEFL 117

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            ++R L +R    H  +  R  II + +  + A+ F+   TPILT  + EG  +      
Sbjct: 118 MEHRHLWVRSSKQHALLRIRAEIIAAAQEWLNAQGFVRFDTPILTPCAAEGTTNLFATPY 177

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            + G+ Y L Q  Q Y +  M S F + +   P FR E  ++ R   EF+ ++ E++F  
Sbjct: 178 FDLGTAY-LGQTGQLYVEAGMMS-FGKVYCFGPTFRAEKSKTRRHLTEFWMIEPEVAFAL 235

Query: 246 QDDILNTMENVLRGVFEEF-----SNGNTVSNN----------FLRICYDDAIR 284
            DD L   E  +  + +        +  T+  +          F RI YD+A+R
Sbjct: 236 HDDNLALQEQFVSAIVQRVLERRADDLATLERDTKPLERCVPPFPRITYDEALR 289


>gi|291549449|emb|CBL25711.1| aspartyl-tRNA synthetase, archaeal type [Ruminococcus torques
           L2-14]
          Length = 443

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 121/247 (48%), Gaps = 25/247 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G+ V+++G +H +R  G I F+ +R   G+ Q V   + + F++ K V+    + + G 
Sbjct: 24  IGTEVKVNGAIHTIRDMGTIAFIILRKRGGLVQCVYEENISKFDL-KDVKEADTVEVTG- 81

Query: 77  VMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGER-EYPESIRFKYRFLDLR 134
           V++ SA+  N       IE+   +++ILS  AE +PLP+   +       +  YR + LR
Sbjct: 82  VLAESAKAPNG------IEIRLGELKILSEPAEPMPLPIAKWKLNTSLEAKLNYRPISLR 135

Query: 135 RDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
                 NI +R +      I+   R  +  E F E  TP + A S EG  +       ++
Sbjct: 136 ------NIRERAKFRIQEGIVRGFRDFLYKEGFTEIHTPKIGAKSAEGGANLFRLEYFHR 189

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            +   L Q+PQ YKQ+ M   FDR F+ AP FR E   + R   E+  LD EM +++  +
Sbjct: 190 PAI--LQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 246

Query: 249 ILNTMEN 255
            +  ME 
Sbjct: 247 DIMAMET 253



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EI +GG R H    +L      G++ E +E        AF+ GMPPHGG
Sbjct: 355 TLSFDLLFRGMEITTGGQRIHDYHELLAKMEKRGMTDEGMEQYLS----AFKHGMPPHGG 410

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M ++   NVRE +LFP
Sbjct: 411 LGIGMERLTMKMMNEDNVRETTLFP 435


>gi|229085162|ref|ZP_04217409.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228698143|gb|EEL50881.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 432

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 121/246 (49%), Gaps = 17/246 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L GWV ++R  G I FL +RD  G+ Q V   + A ++I      E V+ I G ++  
Sbjct: 21  VLLQGWVKKIRHLGNISFLLLRDRTGVIQCVLEKELAGYKID----VESVVQIIGELVET 76

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLDLRRDTL 138
           +   +   +         +++++L+ +E+LP  V  +R+    +      R + LR + +
Sbjct: 77  TKTELGVEV-------IVKEVKVLNTSEQLPFEV-NKRKLQVGLDQMLNERVISLRHERI 128

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                 ++ ++ +    +I  +F    TP + +   EG  +        + ++  L Q+P
Sbjct: 129 QAIFTIQSTLVQAFSEFLIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAY--LAQSP 186

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257
           Q YKQ+++A G +R F+IAP +R E   S R   E+  LD+E+ F+    +++    NVL
Sbjct: 187 QFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHEVMALEANVL 246

Query: 258 RGVFEE 263
           R +FE+
Sbjct: 247 RHMFEQ 252



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  +++L +F   G+        F      F+ G PPHGG   
Sbjct: 347 FDLLYKGLEITSGAQRIHDYDMLLSSFKEKGLHS----GNFQSYIDTFRYGCPPHGGFGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V   L   NVRE S FP
Sbjct: 403 GLERLVYKFLELSNVREASAFP 424


>gi|296110412|ref|YP_003620793.1| asparagine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295831943|gb|ADG39824.1| asparagine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 444

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 32/287 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SACFEIAKSVRSEWVLCI 73
           VG  V++  W+ + R  G + FL +RD     Q VVA  D     F++AK ++ E  + +
Sbjct: 26  VGQTVKIGAWLRQKRGSGKLAFLQLRDGSAFFQAVVAKADVSDTLFDLAKGLKQETSIYV 85

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +  +          E++   IEI+  + + P+     +E+     F  R L L
Sbjct: 86  TGEIHEDTRSSFG-------YEMAVSGIEIIGESHDYPIT---PKEHGTEFLFDERHLYL 135

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +I +       E F +  +P+LT S+PEG  D        + +F  
Sbjct: 136 RHLKPFATLKIRNTLIAATYEFFNREGFTKLDSPLLTGSAPEGTTDLFETDYFGEPAF-- 193

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q+  L   
Sbjct: 194 LSQTGQLYAEA-GAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAFMHQEQSLEVQ 252

Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIR 284
           E  +  +  +    N    + L                R+ YDDAI+
Sbjct: 253 ERYISFLISKVLENNEQELDILERDKDLLRSYTELPYPRVSYDDAIK 299


>gi|321473938|gb|EFX84904.1| hypothetical protein DAPPUDRAFT_99304 [Daphnia pulex]
          Length = 468

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 162/366 (44%), Gaps = 61/366 (16%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACF-EIAKS 64
            GDLG S +   V   G +H  R  G   F  +R      Q    V+   S  F +    
Sbjct: 15  VGDLGTSVIDKKVWARGRLHTSRAKGKQCFFLLRQQQSTVQCLLAVSESTSKAFVKFVAG 74

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES 123
           +  E V+ ++G+V S   +   A      +EL   ++ ++S AE  LPL +  +   PE 
Sbjct: 75  ITKESVIDVEGIVRSVPQKIEGAT--QQDVELHVTQVWVISAAEPRLPLQI-EDASRPEE 131

Query: 124 -------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-----NFIECS 165
                         R   R LDLR  T ++ I +    I +  CR+  E      F+E  
Sbjct: 132 EKEGELAIRVNQETRLDNRVLDLRTPT-NQAIFR----IQAAVCRLFREALDQRKFVEIH 186

Query: 166 TP-ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
           TP I++A+S  GA  F V     +GS Y L Q+PQ YKQ+ +A+ F++ + I   FR ED
Sbjct: 187 TPKIISAASEGGANVFTV--SYFKGSAY-LAQSPQLYKQMAIAADFEKVYTIGAVFRAED 243

Query: 225 PRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNG-----NTVSNNF---- 274
             + R   EF  LD+EM+F     ++L+T+  VL  VF            TV+  F    
Sbjct: 244 SNTHRHLTEFVGLDLEMAFHSHYHEVLDTIGVVLTEVFRGLQKDCMQEIATVNRQFPSEP 303

Query: 275 -------LRICYDDAI---RRYGT---DKPDLRNPI--IMHNVTEHFVHSEFRVFSKI-L 318
                  LR+ + +A+   R+ G    D+ DL  P+  ++  + +    ++F +  K  L
Sbjct: 304 FTFLDPPLRLEFPEAVEMLRQAGEQIGDEDDLSTPMEKLLGRLVKAKYDTDFYILDKYPL 363

Query: 319 SVNPGY 324
           +V P Y
Sbjct: 364 AVRPFY 369



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E + +   + GI      ++      +F+ G PPH G   
Sbjct: 383 YDIFMRGEEIMSGAQRIHDPEYLSERAKHHGIDL----SKIKAYIDSFRYGCPPHAGGGI 438

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  N+R+ S+FP
Sbjct: 439 GMERVAMLFLGLDNIRKTSMFP 460


>gi|70726459|ref|YP_253373.1| asparaginyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|82582281|sp|Q4L6F8|SYN_STAHJ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|68447183|dbj|BAE04767.1| asparaginyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 430

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 33/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +      F++AK +  E  L + G++
Sbjct: 16  VTIGAWLTNKRSSGKIAFLQLRDGSGFMQGVVVKSEVSDETFQLAKEITQESSLYVTGVI 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   +         E+  + IE++  A + P+     + +       +R L LR   
Sbjct: 76  TEDNRSDLG-------YEMQVKSIEVIHEAHDYPI---TPKNHGTEFLMDHRHLWLRSKK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  II +         F +   PILTAS+PEG  +       ++ +F  L Q+
Sbjct: 126 QHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDEDAF--LSQS 183

Query: 198 PQQYKQ-LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
            Q Y +   MA G  R F   P FR E  ++ R   EF+ ++ EM+F    + L   E  
Sbjct: 184 GQLYMEAAAMAHG--RVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHVESLEVQEQY 241

Query: 257 ---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284
                          L+ +  + S    VS  F RI YDDAI+
Sbjct: 242 VSHVVKSVLKNCQLELKALDRDTSKLEKVSAPFPRISYDDAIK 284


>gi|313632667|gb|EFR99644.1| asparaginyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 430

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 124/286 (43%), Gaps = 33/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGEEVFAAAKALTQETSLFV 71

Query: 74  DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            G        TIN +  +    E++   +E++S + + P+     +E+       +R L 
Sbjct: 72  TG--------TINEDTRSPFGYEMAVSGLEVISESHDYPIT---PKEHGTEFLMDHRHLW 120

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +  H  +  R  II +       E F++   PILT S+PEG  +        + +F 
Sbjct: 121 LRSNRQHAIMKIRNEIIRATYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF- 179

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L  
Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLKV 237

Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
            EN    +++ V +           + S+   +   F RI Y +AI
Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDISHLEKMVAPFPRITYTEAI 283


>gi|166796902|gb|AAI59315.1| LOC100145238 protein [Xenopus (Silurana) tropicalis]
          Length = 478

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 122/277 (44%), Gaps = 37/277 (13%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGL 76
           + V+L GWV  VR    ++FL I D   +   Q+VA PD     +  SV     + + G+
Sbjct: 42  AVVKLQGWVRSVRAQKEVLFLHINDGSSMENLQIVAEPD-----LKNSVSFGSSVEVQGM 96

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFKYRFLDLRR 135
           ++    +  N       +EL A+ I I+   + +  P    ER  PE +R ++  L  R 
Sbjct: 97  LVKSLHKKQN-------VELKAEGIRIIGPCDSVDFPFKLKERHSPEYVR-QFPHLRCRT 148

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL-------VPSRVNQ 188
            T    +  R+    +++       +    TPI+T++  EGA +          P+   +
Sbjct: 149 PTFSSLLRIRSEATAAIQEFFKTNGYTHIHTPIITSNDCEGAGELFKVEAANKSPAAGEE 208

Query: 189 GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            SF+ +P       QL   +M+  F R F   P FR E+ +S R   EFY ++ E+SF E
Sbjct: 209 SSFFGVPAFLTVSGQLHLEVMSGAFSRVFTFGPTFRAENSQSRRHLAEFYMVEAEISFTE 268

Query: 246 Q-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
             +DI+  ME++ +          T +   L  C DD
Sbjct: 269 SLEDIMQVMESLFK----------TTTATLLARCPDD 295



 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 6/90 (6%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  E+  G +R    +++ Q    +G+     ++ +       Q G  PHGG   
Sbjct: 394 DLLVPGIGELFGGSLREERPQLLQQRLDRLGL-----KDTYQWYLDLRQFGSVPHGGFGM 448

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R +  +LG +N+++V  FP   + C L
Sbjct: 449 GFERYLQCILGVENIKDVIPFPRFSHSCLL 478


>gi|239827463|ref|YP_002950087.1| asparaginyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239807756|gb|ACS24821.1| asparaginyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 430

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 121/286 (42%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q V   AN     F+IAKS+  E  L +
Sbjct: 12  VGQEVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVEKANVTEDVFKIAKSITQETSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V       I+     G  ELS   +EI+  A + P+     +E+       +R L L
Sbjct: 72  TGTVR------IDERSPFG-YELSVTNLEIIHEAVDYPI---TPKEHGVEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  +I +         F++   PILT S+PEG  +       ++ ++  
Sbjct: 122 RSRRQHAIMKIRNEVIRATYEFFNNHGFVKVDPPILTGSAPEGTTELFHTKYFDEDAY-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F E +D L   
Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYEFEDNLKLQ 238

Query: 254 ENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           E                 L+ +  + +    V   F RI YD+AI+
Sbjct: 239 EEYVSHIVQSVLKNCQLELKTLGRDTTKLELVKPPFPRITYDEAIQ 284


>gi|73984269|ref|XP_856839.1| PREDICTED: similar to Aspartyl-tRNA synthetase (Aspartate--tRNA
           ligase) (AspRS) isoform 4 [Canis familiaris]
          Length = 470

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 157/345 (45%), Gaps = 47/345 (13%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSEWVLCIDGLVM 78
           +S  +      G   FL +R   + +  +VA  D A  ++ K   ++  E ++ ++G+V 
Sbjct: 31  VSSMIQSQDKPGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANINKESIVDVEGVV- 89

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAE-ELPL--------PVFGEREYPESI----R 125
            R       +     +EL  QKI ++S+AE  LPL         V GE E   ++    R
Sbjct: 90  -RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEVEGEEEGRATVNQDTR 148

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R +DLR  T       ++ I +  R  +I + F+E  TP + +++ EG  +    S 
Sbjct: 149 LDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVSY 208

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   EF  LD+EM+F  
Sbjct: 209 FKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNY 266

Query: 246 Q-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LRICYDDA---IRR 285
                 ++I +T+  + +G+ + F     TV+  F           LR+ Y +A   +R 
Sbjct: 267 HYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLRE 326

Query: 286 YGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
            G    D+ DL  P   ++  + +    ++F +  K  L+V P Y
Sbjct: 327 AGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 371



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 385 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 440

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 441 GLERVTMLFLGLHNVRQTSMFP 462


>gi|229918735|ref|YP_002887381.1| asparaginyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229470164|gb|ACQ71936.1| asparaginyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 435

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 117/285 (41%), Gaps = 30/285 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSA--CFEIAKSVRSEWVLCID 74
           G  VR+  W+   R  G I FL +RD  G  Q VV   D A   F +AK +  E  + + 
Sbjct: 16  GQSVRVGAWIANKRSSGKIAFLQLRDGSGFAQAVVVKADVAEELFTLAKGITQETSVWVT 75

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V S    T          EL    +E+  +AE +  P+   +E+        R L LR
Sbjct: 76  GNVKSDGGRTPLG------FELEVTDLEV--IAESVDYPI-TPKEHGTEFLMDNRHLWLR 126

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
               H  +  R  II +       E F++   PILT+S+PEG  +        Q ++  L
Sbjct: 127 SRRQHAIMKVRNEIIRATYEFFNKEGFVKIDPPILTSSAPEGTTELFETDYFGQSAY--L 184

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q  Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FV+ D  L   E
Sbjct: 185 SQTGQLYME-AAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVDHDMNLEIQE 243

Query: 255 ---------------NVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
                          N L  +  +      V   F R+ Y+DAI+
Sbjct: 244 QYVSYIAQSALANCKNELELLGRDLEKLAQVQAPFPRVRYEDAIK 288


>gi|23099214|ref|NP_692680.1| asparaginyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|38258374|sp|Q8EQE2|SYN_OCEIH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|22777442|dbj|BAC13715.1| asparagine-tRNA ligase [Oceanobacillus iheyensis HTE831]
          Length = 430

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 117/281 (41%), Gaps = 31/281 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSA--CFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q +V   D +   F  +K++  E  L + G +
Sbjct: 16  VTIGAWLSNKRSSGKIAFLQLRDGTGFMQGIVVKSDVSEDVFSTSKNITQESSLYVTGKI 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +  +             E+    +E++  A + P+     +E+       +R L LR   
Sbjct: 76  VEDTRSDFG-------YEMQVSNVEVIHEANDYPIT---PKEHGTEFLMDHRHLWLRSKK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  II S       E F++   PILT SS EG  +       ++ ++  L Q+
Sbjct: 126 QHAVMKIRNEIIRSTYEYFNKEGFVKVDPPILTGSSAEGTTELFHTKYFDEEAY--LSQS 183

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L   EN +
Sbjct: 184 GQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEHEESLQIQENYV 242

Query: 258 RGVFE---------------EFSNGNTVSNNFLRICYDDAI 283
             + +               + S    +   F RI YD+AI
Sbjct: 243 SHIVQSVLTNCKLELSVLDRDLSKLEKIKAPFPRISYDEAI 283


>gi|50551341|ref|XP_503144.1| YALI0D22264p [Yarrowia lipolytica]
 gi|49649012|emb|CAG81342.1| YALI0D22264p [Yarrowia lipolytica]
          Length = 564

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 132/285 (46%), Gaps = 28/285 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAK---S 64
           DL  S  G  V     VH  R  G  + F+ +R      Q  +  N DS   ++ K   S
Sbjct: 107 DLNKSMGGQEVVFRARVHTSRLQGNKMCFVSLRQQSANVQGLLTVNADSISKQMVKFAGS 166

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYP 121
           V  E ++ + G V+  S E + +  I   +E++  +  ++S A E P P+  E   R   
Sbjct: 167 VSLESIVLVKGTVVE-SPEPVKSATIQ-DVEIAISQFFVISKAPEQP-PILIEDASRSEA 223

Query: 122 ES-----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           E+            R   R +DLR  T       +  +    R  ++++ FIE  TP + 
Sbjct: 224 EAEAAGLPVVNLDTRLDARCIDLRTATNQAIFRIQHGVCQLFREFLVSKGFIEIHTPKMI 283

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           A++ EG  +    +     +F A  Q+PQ YKQ+LM+  F+R F+IAP FR E+  + R 
Sbjct: 284 AAASEGGANVFKLNYFKGDAFLA--QSPQLYKQMLMSGDFERVFEIAPVFRAENSNTHRH 341

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN--GNTVSN 272
             EF  LD+EM+F E  D++++ +  +   +F E     GN ++ 
Sbjct: 342 MTEFTGLDLEMAFEEHYDEVIDVLSELFIFIFSELKKRYGNDIAT 386



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H  E + Q  +   +  E +         AF  G PPH G   
Sbjct: 477 YDFFMRGEEILSGAQRIHDPEFLKQRMAAHEVDPESL--GLKDYVDAFAYGAPPHAGGGI 534

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM  L  KN+R  SLFP
Sbjct: 535 GLERVVMFFLDLKNIRRASLFP 556


>gi|47215025|emb|CAG01849.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 530

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 154/357 (43%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL        + L   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++ 
Sbjct: 79  DLTPEKADQLIWLRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDRASKQMVKFAANIT 138

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV--------FGE 117
            E ++ ++  V  R  E    +     +EL  ++I ++S AE  LPL +         GE
Sbjct: 139 KESIVDVEASV--RKVEQKIESCSQQDVELHIERIFVVSQAEPRLPLQLDDAVRPDAEGE 196

Query: 118 RE----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            E      +  R   R +DLR  T       ++ +    R  +  + F+E  TP + +++
Sbjct: 197 EEGRATVNQDTRLDNRVIDLRTTTSQAVFRLQSGVCQLFRDTLTNKGFVEIQTPKIISAA 256

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++  L Q+PQ YKQ+ + + F++ F + P FR ED  + R   E
Sbjct: 257 SEGGANVFTVSYFKTSAY--LAQSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHLTE 314

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        D I +TM  + +G+ + F     TV+  F           LR
Sbjct: 315 FVGLDIEMAFNYHYHEVIDSITDTMVQIFKGLRDNFQTEIQTVNKQFPSEPFKFLEPTLR 374

Query: 277 ICYDDAI---RRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y + +   R  G    D+ DL  P   ++  + +    ++F V  K  L+V P Y
Sbjct: 375 LEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 431



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H ++++ +   +  I  E ++        +F+ G PPHGG   
Sbjct: 445 YDMFMRGEEILSGAQRVHDAQLLTERAMHHQIDLEKIK----AYIDSFRFGAPPHGGGGI 500

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 501 GLERVCMLYLGLHNVRQTSMFP 522


>gi|301761808|ref|XP_002916322.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           [Ailuropoda melanoleuca]
 gi|281341070|gb|EFB16654.1| hypothetical protein PANDA_004385 [Ailuropoda melanoleuca]
          Length = 477

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 131/298 (43%), Gaps = 43/298 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V++ GW+  VR    ++FL I D   +   QVVA+      E+A     E    + G
Sbjct: 41  GERVKVQGWIRSVRSQKDVLFLHINDGSALESLQVVADSSFDSRELAFGSSVE----VQG 96

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++   ++  N       +EL A+KIE++   +    P   +  +P     +Y  L  R 
Sbjct: 97  QLVKSPSKKQN-------VELKAEKIEVVGNCDAKAFPFKYKERHPLEYLRQYPHLRCRT 149

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVNQGS 190
           +TL   +  R+    ++        F+   TPI+T++  EGA +   + PS   +V + +
Sbjct: 150 NTLGSILRVRSEATAAIHSFFKDSGFVHIHTPIITSNDCEGAGELFQVEPSSKIKVPEEN 209

Query: 191 FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ- 246
           F+ +P       QL   +M+  F R F   P FR E+ +S R   EFY ++ E+SFVE  
Sbjct: 210 FFNVPAFLTVSGQLHLEVMSGAFTRVFTFGPTFRAENSQSRRHLAEFYMVEAEISFVESL 269

Query: 247 DDILNTMENVLRGVFE-EFSN--------------------GNTVSNNFLRICYDDAI 283
            D++  ME + +       SN                    G+ + NNF+ I Y +AI
Sbjct: 270 QDLMQVMEGLFKTATTIVLSNCPEDVELCHKFIAPGQKDRLGHMLKNNFVIISYTEAI 327


>gi|313901753|ref|ZP_07835180.1| asparaginyl-tRNA synthetase [Thermaerobacter subterraneus DSM
           13965]
 gi|313467989|gb|EFR63476.1| asparaginyl-tRNA synthetase [Thermaerobacter subterraneus DSM
           13965]
          Length = 430

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 133/298 (44%), Gaps = 44/298 (14%)

Query: 14  VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVR 66
           V+ VG F    V L+GWV+  R  G I FL +RD  G+ Q V   D A     E   S+ 
Sbjct: 5   VAQVGRFEGQEVELAGWVYNRRSSGRIAFLLLRDGTGVIQCVITRDRAGEQGLETFASLT 64

Query: 67  SEWVLCIDGLVMS-RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            E    + G+V + R A         G  EL   ++E + VAE+ P+ +   +E+     
Sbjct: 65  QESSCRVWGVVRADRRA--------PGGYELDVTRLEPVHVAEDYPIKL---KEHGVDFL 113

Query: 126 FKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
             +R L +R  T  +N V R R  ++ +    +  E F+    PILT S+PEG  +    
Sbjct: 114 MDHRHLWIR--TPRQNAVLRVRAAVMQAAAEVLAEEGFVRVDAPILTPSAPEGTTNLFET 171

Query: 184 SRVNQGSFYALPQAPQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
               + ++  L Q+ Q Y +   MA G  + + + P FR E  ++ R   EF+ L+ E +
Sbjct: 172 DYFGEKAY--LSQSGQLYMEAACMALG--KVYCLGPTFRAEQSKTRRHLLEFWMLEPEAA 227

Query: 243 FVEQDDILNTMENVLRGV-----------FEEFSNG-----NTVSNNFLRICYDDAIR 284
           F   +D +   E ++RG+            E            V   F+RI YDDA+R
Sbjct: 228 FFTHEDNVALQERLVRGIVLRVLDQCARELETLGRDPETLRREVEAPFVRISYDDALR 285


>gi|256395047|ref|YP_003116611.1| tRNA synthetase class II (D K and N) [Catenulispora acidiphila DSM
           44928]
 gi|256361273|gb|ACU74770.1| tRNA synthetase class II (D K and N) [Catenulispora acidiphila DSM
           44928]
          Length = 430

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 124/298 (41%), Gaps = 31/298 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           + VG  V++ GW+HR R    + FL +RD  G+TQ V     A  E  + +  E VL   
Sbjct: 12  AHVGETVQVCGWLHRRRELKNVTFLILRDRSGLTQAVL--PGAVAEQLRDIPEETVLSFV 69

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLD- 132
           G V +         ++      S  ++E+LS  AE  PL ++     P         LD 
Sbjct: 70  GTVTANEQAPGGVEVVA---PASGPQVELLSTPAETPPLDIY----RPSVTASLPTILDG 122

Query: 133 ----LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
               LR   L+         I   R  + A NF E  TP +  S+ E   +        +
Sbjct: 123 APVALRHPLLNAPFQITAASIAGFRTALDALNFTEIHTPKIVGSATESGANVFALDWFGR 182

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQD 247
            ++ A  Q+PQ +KQ  M   F+R ++  P FR E   + R   ++  LD E+ F+ +  
Sbjct: 183 KAYLA--QSPQFFKQ-AMVGVFERVYETGPVFRAEPSDTARHLAQYTSLDAELGFITDHR 239

Query: 248 DILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAIRRYGTDKPDL 293
           D++  +   L G+    +               TV +    I + DA++  G D+PDL
Sbjct: 240 DVMAVVREALAGMVTTVAERAPAAVDLLGVKLPTVPDQIPEIHFADAMKMLGEDEPDL 297



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G E+ +GG R H  E  + A +  G       N + G    F+ GMPPHGG A 
Sbjct: 345 FDLIFRGLELITGGQRLHRYEDYIAALTARGEPT----NAYEGYLANFKHGMPPHGGFAL 400

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R  M L  A N+R  +LFP
Sbjct: 401 GLERWTMRLTEADNLRRTALFP 422


>gi|163791072|ref|ZP_02185492.1| asparaginyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873628|gb|EDP67712.1| asparaginyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 432

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 123/287 (42%), Gaps = 32/287 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCI 73
           VG  V +  WV   R  G I FL +RD  G  Q +          F++AKS+  E  + +
Sbjct: 13  VGEEVEIGAWVANKRSSGKIAFLQLRDGSGFFQGIVVKSEVEEEVFQLAKSLNQETSISL 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++   S             E++ + I+++  +++ P+     +E+       +R L L
Sbjct: 73  TGIIQEDSRSKFG-------YEIAVKSIKVIGESQDYPIT---PKEHGTEFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +       E FI+   PILTAS+ E + +       +Q +F  
Sbjct: 123 RSSKQHAIMQIRNEIIRATYNFFNEEGFIKVDPPILTASAAEDSTELFHTQYFDQEAF-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F++ +  L   
Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMDHEQSLEVQ 239

Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAIR 284
           E     +++ V +   +   V               + RI YDDA++
Sbjct: 240 EKYVAYIIQSVLDNCDDALDVVGRDKELLKKYTELPYPRISYDDAVK 286


>gi|314940159|ref|ZP_07847337.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314942424|ref|ZP_07849267.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314952300|ref|ZP_07855311.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314994257|ref|ZP_07859560.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314997172|ref|ZP_07862158.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313588746|gb|EFR67591.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313591344|gb|EFR70189.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313595559|gb|EFR74404.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313598824|gb|EFR77669.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313640598|gb|EFS05178.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133a04]
          Length = 432

 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 119/286 (41%), Gaps = 32/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  WV   R  G I FL +RD     Q   V +      F+ AK++  E  + +
Sbjct: 13  VGETVTIGAWVANKRSSGKIAFLQLRDGTAFFQGVVVKSEVSEEVFQTAKNLHQETSVLV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G + + S             E+    +E++S + + P+     +E+       +R L L
Sbjct: 73  TGEIRADSRSKFG-------YEIGITNVEVVSESHDYPIT---PKEHGTDFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +        +F++   PILT S+PEG  D    +  +Q ++  
Sbjct: 123 RSSRQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F  Q++ L   
Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTHQEESLEVQ 239

Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283
           E     +++ V +       V               F RI YDDAI
Sbjct: 240 EQYVAFLVQNVLDHCEYALDVLGRDKEVLKTYTKLPFPRITYDDAI 285


>gi|332236937|ref|XP_003267656.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 2
           [Nomascus leucogenys]
          Length = 401

 Score = 88.2 bits (217), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 45/305 (14%)

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV---- 114
           + A ++  E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL +    
Sbjct: 3   KFAANINKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAV 60

Query: 115 --------FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                    G     +  R   R +DLR  T       ++ I +  R  +I + F+E  T
Sbjct: 61  RPEAEGEEEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQT 120

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P + +++ EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  
Sbjct: 121 PKIISAASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSN 178

Query: 227 SDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF------ 274
           + R   EF  LD+EM+F        ++I +TM  + +G+ E F     TV+  F      
Sbjct: 179 THRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFK 238

Query: 275 -----LRICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LS 319
                LR+ Y +A   +R  G    D+ DL  P   ++ H V E +  ++F +  K  L+
Sbjct: 239 FLEPTLRLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLA 297

Query: 320 VNPGY 324
           V P Y
Sbjct: 298 VRPFY 302



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 316 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 371

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 372 GLERVTMLFLGLHNVRQTSMFP 393


>gi|257883094|ref|ZP_05662747.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257818752|gb|EEV46080.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,502]
          Length = 432

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 32/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  WV   R  G I FL +RD     Q   V +      F+ AK++  E  + +
Sbjct: 13  VGETVTIGAWVANKRSSGKITFLQLRDGTAFFQGVVVKSEVSEEVFQTAKNLHQETSVLV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   S             E+    +E++S + + P+     +E+       +R L L
Sbjct: 73  TGEIREDSRSKFG-------YEIGITNVEVVSESHDYPIT---PKEHGTDFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +        +F++   PILT S+PEG  D    +  +Q ++  
Sbjct: 123 RSSRQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F  Q++ L   
Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTHQEESLEVQ 239

Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283
           E     +++ V +       V               F RI YDDAI
Sbjct: 240 EQYVAFLVQNVLDHCEYALDVLGRDKEVLKTYTKLPFPRITYDDAI 285


>gi|268573520|ref|XP_002641737.1| C. briggsae CBR-DRS-1 protein [Caenorhabditis briggsae]
 gi|187031522|emb|CAP29586.1| CBR-DARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 531

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 150/364 (41%), Gaps = 55/364 (15%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVR 66
           ++ V++    + + G VH +R  G   F+ +R      Q+             +   S+ 
Sbjct: 74  EVNVANATKDIWVRGRVHTIRSKGRNCFIVLRQGVYTVQIAMFMNDKISKQMLKFVSSIS 133

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVF-GEREYPES- 123
            E +  ID        ET   +     +EL AQ++ ++S  A +LPL +    R  P   
Sbjct: 134 KESI--IDVFATINKVETPIESCTQKDVELLAQQVFVVSSSAPKLPLQIEDASRRAPTDE 191

Query: 124 ----------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
                            R   R LDLR  T H     +  I N  R  + A  F+E   P
Sbjct: 192 EKNSEQENQLAVVNLDTRLDNRVLDLRTTTSHAIFRIQAGICNQFRNILDARGFVEIMAP 251

Query: 168 -ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
            I++A S  GA  F V     +GS Y L Q+PQ YKQ+ +A  F++ + I P FR ED  
Sbjct: 252 KIISAPSEGGANVFEV--SYFKGSAY-LAQSPQLYKQMAIAGDFEKVYTIGPVFRAEDSN 308

Query: 227 SDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSN---------GNTVSNNFLR 276
           + R   EF  LD+EM+F     +++ T+  VL  +F+             GN       +
Sbjct: 309 THRHMTEFVGLDLEMAFNFHYHEVMETIAQVLTQLFKGLQQNYQDEISAVGNQYPAEPFQ 368

Query: 277 IC-------YDDAI---RRYGT---DKPDLRNPI--IMHNVTEHFVHSEFRVFSKI-LSV 320
            C       Y DAI   R +     D+ DL  P+   +  + +   H++F V  K  L+V
Sbjct: 369 FCEPPLILKYPDAIALLREHKVEIGDEEDLSTPVEKFLGKLVKEKYHTDFYVLDKFPLAV 428

Query: 321 NPGY 324
            P Y
Sbjct: 429 RPFY 432



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H ++++++   +  +    +++       AF+ G PPH G   
Sbjct: 446 YDMFMRGEEILSGAQRIHDADMLVERAKHHQVDLAKIQSYID----AFKYGCPPHAGGGI 501

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  N+R  SLFP
Sbjct: 502 GLERVTMLFLGLHNIRLASLFP 523


>gi|315303833|ref|ZP_07874321.1| asparaginyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313627794|gb|EFR96439.1| asparaginyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 430

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 123/286 (43%), Gaps = 33/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGVWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDEVFATAKALTQETSLFV 71

Query: 74  DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            G        TIN +  +    EL+   +E++S + + P+     +E+       +R L 
Sbjct: 72  TG--------TINEDTRSPFGYELAVSGVEVISESNDYPIT---PKEHGTEFLMDHRHLW 120

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR    H  +  R  II +       E F++   PILT S+PEG  +        + +F 
Sbjct: 121 LRSSRQHAIMKIRNEIIRATYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF- 179

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L  
Sbjct: 180 -LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLKV 237

Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
            EN    +++ V +           + S+   +   F RI Y +AI
Sbjct: 238 QENYVAFLVKAVLDNCRLELDRLGRDISHLEKMVAPFPRITYTEAI 283


>gi|26338383|dbj|BAC32877.1| unnamed protein product [Mus musculus]
          Length = 477

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 133/307 (43%), Gaps = 48/307 (15%)

Query: 12  LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVR 66
           L V D  G  V + GW+  VR    ++FL + D   +   Q+VA+   DS       SV+
Sbjct: 34  LRVQDARGECVTVQGWIRSVRSQKEVLFLHVNDGSSLESLQIVADSSFDSTELTFGSSVQ 93

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                 + G ++   ++  N       +EL A+KIE++   E    P+  +  +P     
Sbjct: 94  ------VQGQLVKSQSKRQN-------VELKAEKIEVIGDCEAKAFPIKYKERHPLEYLR 140

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS 184
           +Y  L  R + L   +  R+    ++        F+   TP+LT++  EGA +   + PS
Sbjct: 141 QYPHLRCRTNALGSILRVRSEATAAIHSYFKDNGFVHIHTPVLTSNDCEGAGELFQVEPS 200

Query: 185 RVNQG---SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
              +G   SF+ +P       QL   +M+  F + F   P FR E+ +S R   EFY ++
Sbjct: 201 SKIKGPKESFFDVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVE 260

Query: 239 MEMSFVEQ-DDILNTMENVLRGVFE--------------EFSNG-------NTVSNNFLR 276
            E+SFVE   D++  ME + +   E              +F          + + NNFL 
Sbjct: 261 AEISFVESLQDLMQVMEELFKATTEMVLSHCPEDVELCHQFIAAGQKGRLEHMLKNNFLI 320

Query: 277 ICYDDAI 283
           I Y +AI
Sbjct: 321 ISYTEAI 327



 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 6/90 (6%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  E+  G +R     V+ Q  +  G++K     ++    R F  G  PHGG   
Sbjct: 393 DLLVPGVGELFGGSLREERYHVLEQRLARSGLTKAY---QWYLDLRKF--GSVPHGGFGM 447

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R +  +LG  N+++V  FP   + C L
Sbjct: 448 GFERYLQCILGVDNIKDVIPFPRFTHSCLL 477


>gi|315166437|gb|EFU10454.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1341]
          Length = 450

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 119/295 (40%), Gaps = 40/295 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  W+   R  G I FL +RD     Q VV  P+          +  F+  K +
Sbjct: 19  VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQEIKHL 78

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G++   S             E+    +E++  +E+ P+     +E+     
Sbjct: 79  SQETAVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 128

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +      
Sbjct: 129 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 188

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q +F  L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM++  
Sbjct: 189 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 245

Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284
            ++ L+  E  ++ + +                       V   F RI YDDAI 
Sbjct: 246 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVLEPFKRITYDDAIE 300


>gi|212224110|ref|YP_002307346.1| asparaginyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212009067|gb|ACJ16449.1| asparaginyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 430

 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 41/297 (13%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVR 66
           C D+     G  V+L+GWV+R R  G  +F+ +RD  GI Q +   +     +  AK V 
Sbjct: 7   CADVRPEMEGKRVKLAGWVYRKREVGKKVFIVLRDSSGIVQTIFKKELSEEAYAEAKKVG 66

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  + I+G+V +      +    TG +E+ A KI+++   E  P+      E+      
Sbjct: 67  IESSVIIEGVVKA------DPRAPTG-VEVQADKIQVIQNVEFFPITKDASDEF------ 113

Query: 127 KYRFLDLRRDTLHK----NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
               LD+R   LH     +I+K +  ++ + R  ++ + + E   PIL   + EG     
Sbjct: 114 ---LLDVRHLHLHSPKVASIMKVKATLMQAAREWLLQDGWYEVFPPILVTGAVEGGATLF 170

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                ++ ++  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E 
Sbjct: 171 KLKYFDRYAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEA 227

Query: 242 SFVEQDDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283
           ++++  DI+   E ++           R   E F    T   N    F RI YD+AI
Sbjct: 228 AWMDLWDIMKVEEELVSYMVQRTLELRRSDIETFRKDLTTLKNTVPPFPRISYDEAI 284


>gi|69247321|ref|ZP_00604303.1| Asparaginyl-tRNA synthetase, class IIb [Enterococcus faecium DO]
 gi|257879983|ref|ZP_05659636.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257884121|ref|ZP_05663774.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257890492|ref|ZP_05670145.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894419|ref|ZP_05674072.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258614366|ref|ZP_05712136.1| asparaginyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260558925|ref|ZP_05831112.1| asparaginyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261209448|ref|ZP_05923811.1| asparaginyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289566625|ref|ZP_06447044.1| asparaginyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293553818|ref|ZP_06674433.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|293559763|ref|ZP_06676283.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|294616367|ref|ZP_06696160.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294622013|ref|ZP_06701156.1| asparaginyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314950178|ref|ZP_07853463.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|68194891|gb|EAN09362.1| Asparaginyl-tRNA synthetase, class IIb [Enterococcus faecium DO]
 gi|257814211|gb|EEV42969.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257819959|gb|EEV47107.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257826852|gb|EEV53478.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830798|gb|EEV57405.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260075033|gb|EEW63348.1| asparaginyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260076576|gb|EEW64340.1| asparaginyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289161566|gb|EFD09447.1| asparaginyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291590881|gb|EFF22597.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291598403|gb|EFF29477.1| asparaginyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291602024|gb|EFF32261.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291606246|gb|EFF35660.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313643488|gb|EFS08068.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 432

 Score = 87.8 bits (216), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 32/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  WV   R  G I FL +RD     Q   V +      F+ AK++  E  + +
Sbjct: 13  VGETVTIGAWVANKRSSGKIAFLQLRDGTAFFQGVVVKSEVSEEVFQTAKNLHQETSVLV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   S             E+    +E++S + + P+     +E+       +R L L
Sbjct: 73  TGEIREDSRSKFG-------YEIGITNVEVVSESHDYPIT---PKEHGTDFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +        +F++   PILT S+PEG  D    +  +Q ++  
Sbjct: 123 RSSRQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F  Q++ L   
Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTHQEESLEVQ 239

Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283
           E     +++ V +       V               F RI YDDAI
Sbjct: 240 EQYVAFLVQNVLDHCEYALDVLGRDKEVLKTYTKLPFPRITYDDAI 285


>gi|325571049|ref|ZP_08146621.1| asparagine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325156134|gb|EGC68320.1| asparagine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 432

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 42/291 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V++  WV   R  G I FL +RD     Q   V +      F++AK++  E  + +
Sbjct: 13  VGETVQIGAWVANKRSSGKIAFLQLRDGTAYFQGIVVKSEVGEEVFQLAKNLNQETAVLV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   S             E+    +E++  + + P+     +E+       +R L L
Sbjct: 73  TGEIREDSRSKFG-------YEIGISGLEVVGESHDYPIT---PKEHGTDFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +         FI+   PILT S+PEG  D    +  +Q ++  
Sbjct: 123 RSSKQHAIMQIRNEIIRATYEFFNKNGFIKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L   
Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLEVQ 239

Query: 254 E--------NVL-------------RGVFEEFSNGNTVSNNFLRICYDDAI 283
           E        NVL             R V ++++        F RI YDDA+
Sbjct: 240 EQYVAFLVQNVLDNCDYALDVLGRDREVLKKYTK-----LPFPRISYDDAV 285


>gi|296204891|ref|XP_002749522.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 2
           [Callithrix jacchus]
          Length = 401

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 140/305 (45%), Gaps = 45/305 (14%)

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV---- 114
           + A ++  E ++ ++G+V  R       +     +EL  QK+ ++S+AE  LPL +    
Sbjct: 3   KFAANINKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKVYVISLAEPRLPLQLDDAV 60

Query: 115 --------FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                    G     +  R   R +DLR  T       ++ I +  R  +I + F+E  T
Sbjct: 61  RPEAEGEEEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQT 120

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P + +++ EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  
Sbjct: 121 PKIISAASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSN 178

Query: 227 SDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF------ 274
           + R   EF  LD+EM+F        ++I +TM  + +G+ E F     TV+  F      
Sbjct: 179 THRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFK 238

Query: 275 -----LRICYDDA---IRRYGT---DKPDLRNP---IIMHNVTEHFVHSEFRVFSKI-LS 319
                LR+ Y +A   +R  G    D+ DL  P   ++ H V E +  ++F +  K  L+
Sbjct: 239 FLEPTLRLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKY-DTDFYILDKYPLA 297

Query: 320 VNPGY 324
           V P Y
Sbjct: 298 VRPFY 302



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 316 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 371

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 372 GLERVTMLFLGLHNVRQTSMFP 393


>gi|94984903|ref|YP_604267.1| aspartyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|94555184|gb|ABF45098.1| aspartyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 439

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 118/244 (48%), Gaps = 22/244 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+L G++H  R  GG+ FL +RD  GI Q V     A  ++      E  + + G V
Sbjct: 22  GQTVKLQGFLHARRDLGGVQFLVLRDRSGIAQAVG----AGLDLPLP---ESSIEVIGKV 74

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---PESIRFKYRFLDLR 134
            +            G  E+  +++ +L+ A E P     + E+   PE++   YR + +R
Sbjct: 75  KAHPK-------APGGYEVQVERLRVLTPATEPPPVEIPKMEWNVNPETL-LDYRVVTVR 126

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
                  +  +  ++ + R  + +E F E STP + ++  EG  +          ++ A 
Sbjct: 127 GLKERAVLKVQAELVAAFRDHLTSEGFTEISTPKIVSAGAEGGANLFPIDYFGHPAYLA- 185

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTM 253
            Q+PQ YKQ+ M   F+R F++AP +R E+  + R   E+  LD+EM F+E ++D+++  
Sbjct: 186 -QSPQLYKQI-MVGVFERVFEVAPVYRAEEHATSRHLNEYLSLDVEMGFIESEEDVMDLE 243

Query: 254 ENVL 257
             VL
Sbjct: 244 TRVL 247



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SGG R H   ++L + +   ++ E       G    F+ GMPPHGG A 
Sbjct: 354 FDLLFRGIEITSGGQRIHEYSMLLDSIAQYRLNPE----SLAGYTEVFKYGMPPHGGFAI 409

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+   LLG  NVR    FP  ++
Sbjct: 410 GAERLTAKLLGIANVRYARAFPRDRH 435


>gi|257867747|ref|ZP_05647400.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257874075|ref|ZP_05653728.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257876652|ref|ZP_05656305.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257801830|gb|EEV30733.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257808239|gb|EEV37061.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257810818|gb|EEV39638.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 432

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 42/291 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V++  WV   R  G I FL +RD     Q   V +      F++AK++  E  + +
Sbjct: 13  VGETVQIGAWVANKRSSGKIAFLQLRDGTAYFQGIVVKSEVGEEVFQLAKNLNQETAVLV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   S             E+    +E++  + + P+     +E+       +R L L
Sbjct: 73  TGEIREDSRSKFG-------YEIGISGLEVVGESHDYPIT---PKEHGTDFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +         FI+   PILT S+PEG  D    +  +Q ++  
Sbjct: 123 RSSKQHAIMQIRNEIIRATYEFFNKNGFIKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L   
Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLEVQ 239

Query: 254 E--------NVL-------------RGVFEEFSNGNTVSNNFLRICYDDAI 283
           E        NVL             R V ++++        F RI YDDA+
Sbjct: 240 EQYVAFLVQNVLDNCDYALDVLGRDREVLKKYTK-----LPFPRISYDDAV 285


>gi|295398908|ref|ZP_06808890.1| asparaginyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312110485|ref|YP_003988801.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294978374|gb|EFG53970.1| asparaginyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311215586|gb|ADP74190.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 430

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 119/286 (41%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q V          F+IAKS+  E  L +
Sbjct: 12  VGQEVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVEKSKVTEEVFQIAKSISQETSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V                 ELS   +EI+  A + P+     +E+       +R L L
Sbjct: 72  TGTVRVDERSPFG-------YELSVTNLEIIHEAVDYPI---TPKEHGVEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  +I +         F++   PILT S+PEG  +       ++ ++  
Sbjct: 122 RSRRQHAIMKIRNEVIRATYEFFNDRGFVKVDPPILTGSAPEGTTELFHTKYFDEDAY-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F E +D L   
Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYEFEDNLTLQ 238

Query: 254 E----NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284
           E    ++++ V E           + +    V   F RI YD+AI+
Sbjct: 239 EEYVSHIVQSVLENCQLELKTLGRDTTKLELVKPPFPRITYDEAIQ 284


>gi|323466412|gb|ADX70099.1| asparaginyl-tRNA synthetase-like protein 2 (putative)
           [Lactobacillus helveticus H10]
          Length = 448

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 119/283 (42%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      FE+AKS+R E    I G V
Sbjct: 34  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVTDEVFEVAKSLRQESSFYITGTV 93

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    ++++S  E  P+   G +E+       +R L LR   
Sbjct: 94  HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGIDFLLDHRHLWLRSKK 143

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E+FI+   PI   S+PEG          +  ++  L Q+
Sbjct: 144 PFAIMQIRNTMFKATVDFFEKEDFIKFDAPIFMHSAPEGTTQLFHVDYFDHDAY--LSQS 201

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  F + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 202 GQLYGEA-GAMAFGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDLQERYL 260

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++  + N                T   NF+R+ YDDA++
Sbjct: 261 AYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFVRLPYDDAVK 303


>gi|260101289|ref|ZP_05751526.1| asparagine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260084874|gb|EEW68994.1| asparagine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 432

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 119/283 (42%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      FE+AKS+R E    I G V
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVTDEVFEVAKSLRQESSFYITGTV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    ++++S  E  P+   G +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGIDFLLDHRHLWLRSKK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E+FI+   PI   S+PEG          +  ++  L Q+
Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEDFIKFDAPIFMHSAPEGTTQLFHVDYFDHDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  F + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEA-GAMAFGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDLQERYL 244

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++  + N                T   NF+R+ YDDA++
Sbjct: 245 AYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFVRLPYDDAVK 287


>gi|289550765|ref|YP_003471669.1| Asparaginyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|315658261|ref|ZP_07911133.1| asparagine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|289180297|gb|ADC87542.1| Asparaginyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|315496590|gb|EFU84913.1| asparagine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 430

 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 115/281 (40%), Gaps = 31/281 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  L + G +
Sbjct: 16  VTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSAVDEETFQLAKDITQESSLYVTGTI 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +   I         E+    I+++  A + P+     + +       +R L LR   
Sbjct: 76  SEDNRSDIG-------YEMQVTSIQVIHEAHDYPI---TPKNHGTEFLMDHRHLWLRSKK 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  II +         + +   PILTAS+PEG  +       +Q +F  L Q+
Sbjct: 126 QHAVMKIRNEIIRATYEFFDTHGYTKIDPPILTASAPEGTSELFHTKYFDQDAF--LSQS 183

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME--- 254
            Q Y +   A      F   P FR E  ++ R   EF+ ++ EM+F    + L   E   
Sbjct: 184 GQLYLE-AAAMAHRNVFSFGPTFRAEKSKTRRHLIEFWMIEAEMAFTTHAESLEVQEQYV 242

Query: 255 -NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
            +V++ V E           + S    V+  F RI YDDAI
Sbjct: 243 AHVVQSVLENCTLELKLLDRDTSKLEKVATPFPRITYDDAI 283


>gi|254566191|ref|XP_002490206.1| Cytoplasmic aspartyl-tRNA synthetase, homodimeric enzyme [Pichia
           pastoris GS115]
 gi|238030002|emb|CAY67925.1| Cytoplasmic aspartyl-tRNA synthetase, homodimeric enzyme [Pichia
           pastoris GS115]
 gi|328350604|emb|CCA37004.1| aspartyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 555

 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 24/278 (8%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSACFEIAK-- 63
            G L  +D G  V     ++  R  G  ++FL +R    + Q V  AN DS   ++ K  
Sbjct: 96  IGSLTAADDGKEVVFRARIYNTRKQGTTMVFLSLRQRTELIQAVLKANGDSVSKQMVKWA 155

Query: 64  -SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF-GEREY 120
            ++  E ++ + G + S+  E + +  I  + E+   KI  +S   E LPL V    R  
Sbjct: 156 SAISLESIVTVHGTI-SKVVEPVKSATIQ-EFEVLINKIYTISETPERLPLLVEDASRSD 213

Query: 121 PES-----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
            E+            R   R +DLR  T       ++ +    R  +  + F E  TP L
Sbjct: 214 AEAERSGLPIVNLDTRLDARVIDLRTITNQAIFTIQSGVCLLFREFLTKKKFTEVHTPKL 273

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             +  EG  +    +     +F A  Q+PQ YKQ L+A+ F+R F++AP FR E+  + R
Sbjct: 274 LGAPSEGGSNVFEVTYFKGKAFLA--QSPQLYKQQLIAADFERVFEVAPVFRAENSNTHR 331

Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
              EF  LD+EM+F E  D++++ +  +   +F E   
Sbjct: 332 HMTEFTGLDLEMTFEEHYDEVIDLLSELFVFIFSELKT 369



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 8/85 (9%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---YRAFQCGMPPHGG 538
           YD    G EI SG  R H SE + +  S  G+     ++   GL    +AF  G  PHGG
Sbjct: 468 YDFFMRGEEILSGAQRIHDSEFLKERMSVHGL-----DSNSPGLEDYVQAFDYGCAPHGG 522

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
              G++R+VM  L  KN+R  SLFP
Sbjct: 523 GGIGLERVVMFYLDLKNIRRASLFP 547


>gi|161507621|ref|YP_001577575.1| asparaginyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|172048289|sp|A8YVJ7|SYN_LACH4 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|160348610|gb|ABX27284.1| Asparaginyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 432

 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 119/283 (42%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      FE+AKS+R E    I G V
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVTDEVFEVAKSLRQESSFYITGTV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    ++++S  E  P+   G +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGIDFLLDHRHLWLRSKK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E+FI+   PI   S+PEG          +  ++  L Q+
Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEDFIKFDAPIFMHSAPEGTTQLFHVDYFDHDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  F + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEA-GAMAFGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDLQERYL 244

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++  + N                T   NF+R+ YDDA++
Sbjct: 245 AYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFVRLPYDDAVK 287


>gi|197302918|ref|ZP_03167969.1| hypothetical protein RUMLAC_01646 [Ruminococcus lactaris ATCC
           29176]
 gi|197297999|gb|EDY32548.1| hypothetical protein RUMLAC_01646 [Ruminococcus lactaris ATCC
           29176]
          Length = 452

 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 118/247 (47%), Gaps = 25/247 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G+ VR++G +H +R  G + F+ +R   G+ Q V     + F + K V+    + + G+
Sbjct: 33  IGTEVRVNGAIHTIRDMGTVAFIILRKREGLVQCVYEEGVSKFNL-KDVKEADTVEVSGM 91

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGER-EYPESIRFKYRFLDLR 134
            + RS +  N       IE+   +++ILS  AE +PLP+   +       +  YR + LR
Sbjct: 92  -LERSEKAPNG------IEIRLGELKILSEPAEPMPLPISKWKLNTSLEAKLNYRPISLR 144

Query: 135 RDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
                 NI +R +      I+   R  +  E F E  TP + A S EG  +       ++
Sbjct: 145 ------NIRERAKFRIQEGIVRGFRDFLYQEGFTEIHTPKIGAKSAEGGANLFRLEYFHR 198

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            +   L Q+PQ YKQ+ M   FDR F+ AP FR E   + R   E+  LD EM +++  +
Sbjct: 199 PAI--LQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 255

Query: 249 ILNTMEN 255
            +  ME 
Sbjct: 256 DIMAMET 262



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EI +GG R H    +L      G++ E +E        AF+ GMPPHGG
Sbjct: 364 TLSFDLLFRGMEITTGGQRIHDYHELLAKMEKRGMTDEGMEQYLS----AFKHGMPPHGG 419

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M ++   NVRE +LFP
Sbjct: 420 LGIGMERLTMKMMNEDNVRETTLFP 444


>gi|15806075|ref|NP_294779.1| aspartyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|6458780|gb|AAF10623.1|AE001956_4 aspartyl-tRNA synthetase, non-discriminating [Deinococcus
           radiodurans R1]
          Length = 435

 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 21/243 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+L G+VH  R  GG+ FL +RD  G+TQ V +       +A+S      + + G V
Sbjct: 18  GQTVKLQGFVHARRDLGGVQFLVLRDVTGVTQCVGS--GLTLPLAESS-----VEVVGKV 70

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEE---LPLPVFGEREYPESIRFKYRFLDLR 134
            +            G  E+  +   ++S A E   + +P       PE++   YR + +R
Sbjct: 71  KAHPK-------APGGFEVQVEDFRVISAATEATPVEIPKMEWNVNPETM-LDYRVVTVR 122

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
                  +  +  ++++ R  +  E F E STP + ++  EG  +          ++ A 
Sbjct: 123 GLKERAALKVQAELVDAFRAHLRGEGFTEISTPKIVSAGAEGGANLFPIDYFGHPAYLA- 181

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+PQ YKQ+ M   F+R F++A  +R E+  + R   E+  LD+EM F+E ++ +  +E
Sbjct: 182 -QSPQLYKQI-MVGVFERVFEVAAVYRAEEHATSRHLNEYLSLDVEMGFIEDEEDVMGLE 239

Query: 255 NVL 257
           N L
Sbjct: 240 NRL 242



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SGG R H   +++ + +   +  E +E    G    F+ GMPPHGG A 
Sbjct: 350 FDLLFRGIEITSGGQRIHDYGMLMDSIAAYKLKPESLE----GYTEVFKYGMPPHGGFAI 405

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+   LLG  NVR    FP  ++
Sbjct: 406 GAERLTAKLLGIANVRYARAFPRDRH 431


>gi|332976957|gb|EGK13772.1| asparagine--tRNA ligase [Desmospora sp. 8437]
          Length = 429

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 129/287 (44%), Gaps = 31/287 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVL 71
           + VG  VRL  W++  R  G I FL +RD  G  Q   V +      +E A  +  E  L
Sbjct: 10  AHVGEQVRLGAWLYNKRSSGKIQFLQLRDGTGFIQGVLVKSKVSPEVWEAAVELTQESSL 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            ++G + +      +    +G  E+    IE++  A+E P+ +   +E+       +R L
Sbjct: 70  YVEGTIRA------DKRAPSG-YEMDVTSIEVIQQAQEYPIAL---KEHGVEFLMDHRHL 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R       +  R++I+ ++R  +  + F     P+LT SS EG  +       ++ ++
Sbjct: 120 WIRSPRQRAILRIRSKIVQAVRGWLDGQGFTLVDPPVLTPSSCEGTTNLFHTKYFDEDAY 179

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    R +   P FR E  ++ R   EF+ ++ EM+FV+ ++ L 
Sbjct: 180 --LTQSGQLYMEA-AAMALGRVYSFGPAFRAEKSKTRRHLIEFWMIEPEMAFVDHEENLV 236

Query: 252 TMENVL----RGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
             EN+L    R V E           + ++   V   F RI YD+A+
Sbjct: 237 IQENMLTHLVRYVLENCREELEILGRDPASLEKVQGPFPRITYDEAV 283


>gi|331701435|ref|YP_004398394.1| asparaginyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128778|gb|AEB73331.1| Asparaginyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 431

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 16/244 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           V   V++  W+   R  G I FL +RD     Q   V +N     FE+AK V+ E  + +
Sbjct: 13  VNEKVKIGVWLTNKRSSGKIAFLQLRDGTAFFQGVVVKSNVTPEVFELAKEVKQETSMWV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++   +             E+  + IE+LS   + P+     +E+       +R L L
Sbjct: 73  TGIIHEDARSKFG-------YEIEIETIEVLSETHDYPI---TPKEHGVDFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  +I +       E FI+   PILT S+PEG          ++ ++  
Sbjct: 123 RSSRPHAVMRIRNEVIKATYDFFNDEGFIKIDAPILTGSAPEGTTTLFHTEYFDRDAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y++   A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L   
Sbjct: 181 LSQSGQLYEEA-GAEAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLEIQ 239

Query: 254 ENVL 257
           E  +
Sbjct: 240 ERYI 243


>gi|293568613|ref|ZP_06679928.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|293571665|ref|ZP_06682686.1| asparaginyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291588573|gb|EFF20406.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291608335|gb|EFF37636.1| asparaginyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 432

 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 32/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  WV   R  G I FL +RD     Q   V +      F+ AK++  E  + +
Sbjct: 13  VGETVTIGAWVANKRSSGKIAFLQLRDGTAFFQGVVVKSEVPEEVFQTAKNLHQETSVLV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   S             E+    +E++S + + P+     +E+       +R L L
Sbjct: 73  TGEIREDSRSKFG-------YEIGITNVEVVSESHDYPI---TPKEHGTDFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +        +F++   PILT S+PEG  D    +  +Q ++  
Sbjct: 123 RSSRQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F  Q++ L   
Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTHQEESLEVQ 239

Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283
           E     +++ V +       V               F RI YDDAI
Sbjct: 240 EQYVAFLVQNVLDHCEYALDVLGRDKEVLKTYTKLPFPRITYDDAI 285


>gi|73748416|ref|YP_307655.1| lysyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|123759759|sp|Q3ZWX9|SYK_DEHSC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|73660132|emb|CAI82739.1| lysyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 498

 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 136/284 (47%), Gaps = 32/284 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLV 77
           ++L+G +   R  G I F+DIRD  G  Q+     + D A  E+ K +     + ++G +
Sbjct: 56  LKLAGRIMNRRDMGKISFMDIRDGSGKMQIFFRQNDLDEASIELLKDLDLGDFIGVEGSL 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           M            TG+  L+A K+ +LS +  LPLP           R++ R+LDL  + 
Sbjct: 116 MRTR---------TGEPSLAATKVSMLSKSL-LPLPEKWHGLQDVEKRYRQRYLDLISNA 165

Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG----ARDFLVPSRVNQGSFY 192
              +  + R+R+I+ +R  M A+ F+E  TP+L    PE     AR F+   +     FY
Sbjct: 166 DARQTFLTRSRVISVIRAFMNAKGFLEVETPVL---QPEAGGALARPFITHHQALNCDFY 222

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  A + + + L+  GFDR ++I   FR+E   +   P EF  ++   ++    D+++ 
Sbjct: 223 -MRIALELHLKRLIVGGFDRVYEIGRIFRNEGISTRHNP-EFTMMESYQAYANYKDVMDF 280

Query: 253 MENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
           +E ++  V +E S G T+         +  + R+   DA+++Y 
Sbjct: 281 LEEMVSSVVKEISGGYTLPFGDITLDFTPPWPRLTMRDAVKQYA 324



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 27/43 (62%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A   GMPP GG+  GIDR+VML     ++REV LFP  ++  D
Sbjct: 451 ALAYGMPPTGGLGVGIDRLVMLFTNHDSIREVILFPALKDRED 493


>gi|116618476|ref|YP_818847.1| asparaginyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116097323|gb|ABJ62474.1| asparaginyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 435

 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 121/287 (42%), Gaps = 32/287 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSA--CFEIAKSVRSEWVLCI 73
           VG  V +  W+ + R  G I FL +RD     Q VVA  D +   FE AKS++ E  + +
Sbjct: 17  VGKTVTIGAWLRQKRGSGKIAFLQLRDGTAFFQGVVAKADVSEEVFETAKSLKQETSIYV 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +  +          E++   I+++  + + P+     +E+     F  R L L
Sbjct: 77  TGEIHEDARSSFG-------YEMAVSDIKVIGESHDYPIT---PKEHGTEFLFDERHLYL 126

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  ++ +       E F +   P+LT S+PEG  +        + +F  
Sbjct: 127 RHLKPFATLKIRNTLVAATYEFFNKEGFTKLDAPVLTGSAPEGTTELFETDYFGEPAF-- 184

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F++Q++ L   
Sbjct: 185 LSQTGQLYAEA-GAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAFMDQEESLKLQ 243

Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIR 284
           E  +  +  +    N    + L                R+ YDDA++
Sbjct: 244 ERYIAFLISKVLENNDQELDILKRDKGLLRSYTQLPYPRVSYDDAVK 290


>gi|157951696|ref|NP_705819.3| probable asparaginyl-tRNA synthetase, mitochondrial precursor [Mus
           musculus]
 gi|81873734|sp|Q8BGV0|SYNM_MOUSE RecName: Full=Probable asparaginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS;
           Flags: Precursor
 gi|26338379|dbj|BAC32875.1| unnamed protein product [Mus musculus]
 gi|26338574|dbj|BAC32958.1| unnamed protein product [Mus musculus]
 gi|26341458|dbj|BAC34391.1| unnamed protein product [Mus musculus]
 gi|74209761|dbj|BAE23597.1| unnamed protein product [Mus musculus]
 gi|74211175|dbj|BAE37666.1| unnamed protein product [Mus musculus]
          Length = 477

 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 133/307 (43%), Gaps = 48/307 (15%)

Query: 12  LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVR 66
           L V D  G  V + GW+  VR    ++FL + D   +   Q+VA+   DS       SV+
Sbjct: 34  LRVQDARGECVTVQGWIRSVRSQKEVLFLHVNDGSSLESLQIVADSSFDSRELTFGSSVQ 93

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                 + G ++   ++  N       +EL A+KIE++   E    P+  +  +P     
Sbjct: 94  ------VQGQLVKSQSKRQN-------VELKAEKIEVIGDCEAKAFPIKYKERHPLEYLR 140

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS 184
           +Y  L  R + L   +  R+    ++        F+   TP+LT++  EGA +   + PS
Sbjct: 141 QYPHLRCRTNALGSILRVRSEATAAIHSYFKDNGFVHIHTPVLTSNDCEGAGELFQVEPS 200

Query: 185 RVNQG---SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
              +G   SF+ +P       QL   +M+  F + F   P FR E+ +S R   EFY ++
Sbjct: 201 SKIKGPKESFFDVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVE 260

Query: 239 MEMSFVEQ-DDILNTMENVLRGVFE--------------EFSNG-------NTVSNNFLR 276
            E+SFVE   D++  ME + +   E              +F          + + NNFL 
Sbjct: 261 AEISFVESLQDLMQVMEELFKATTEMVLSHCPEDVELCHQFIAAGQKGRLEHMLKNNFLI 320

Query: 277 ICYDDAI 283
           I Y +AI
Sbjct: 321 ISYTEAI 327



 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 6/90 (6%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  E+  G +R     V+ Q  +  G++K     ++    R F  G  PHGG   
Sbjct: 393 DLLVPGVGELFGGSLREERYHVLEQRLARSGLTKAY---QWYLDLRKF--GSVPHGGFGM 447

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R +  +LG  N+++V  FP   + C L
Sbjct: 448 GFERYLQCILGVDNIKDVIPFPRFTHSCLL 477


>gi|307291045|ref|ZP_07570931.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306497894|gb|EFM67425.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|315030989|gb|EFT42921.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX4000]
          Length = 450

 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 119/295 (40%), Gaps = 40/295 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  W+   R  G I FL +RD     Q VV  P+          +  F+  K +
Sbjct: 19  VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQEIKHL 78

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G++   S             E+    +E++  +E+ P+     +E+     
Sbjct: 79  SQETSVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 128

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +      
Sbjct: 129 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 188

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q +F  L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM++  
Sbjct: 189 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 245

Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284
            ++ L+  E  ++ + +                       V   F RI YDDAI 
Sbjct: 246 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVLEPFKRITYDDAIE 300


>gi|298246266|ref|ZP_06970072.1| aspartyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297553747|gb|EFH87612.1| aspartyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 437

 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 120/257 (46%), Gaps = 23/257 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLC 72
           VG  VR+ GW+   R  G I FL IRD +G  Q VA  ++   EIA  + +E     ++ 
Sbjct: 15  VGERVRVQGWLQSWRQLGSIHFLVIRDGWGQIQAVAESEA---EIAPLIEAEAGVESLVA 71

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE-SIRFKYRF 130
           I+GLV S            G IEL    IE++  + E  P P+   +   + S    +  
Sbjct: 72  IEGLVESVPQ-------APGGIELHNLAIELIEPIRETPPFPINKRKINAQLSTLLDHAV 124

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           +  R  T    +   + +  + R  ++   F E  TP +  ++ EG  +        + +
Sbjct: 125 ITHRHPTRRAVLRLSSVLSQAFRESVLTRGFTEIHTPKILGTTTEGGANVFKLDYFGRPA 184

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DI 249
           + A  Q+PQ YKQ+ M   F+R F++ P FR E+  S R   E+  LD+EM F+E    I
Sbjct: 185 YLA--QSPQLYKQI-MVGVFERVFEVGPVFRAEEHDSTRHLNEYVSLDVEMGFIENHFTI 241

Query: 250 LNTMENVLR---GVFEE 263
           +  + ++L    G F+E
Sbjct: 242 MALLRDILADIIGAFQE 258



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G E+ +GG R H     L+A  +  +S E  E+       AF+ GMPPHGG A 
Sbjct: 352 FDLLFRGLELVTGGQRLHRYADYLEALQSRNMSMEPFEHYL----EAFRYGMPPHGGFAI 407

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++M LLGA NVR  + FP
Sbjct: 408 GSERLLMQLLGAPNVRLTTTFP 429


>gi|227551929|ref|ZP_03981978.1| asparagine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257886906|ref|ZP_05666559.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257895477|ref|ZP_05675130.1| asparaginyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257898093|ref|ZP_05677746.1| asparaginyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|293378343|ref|ZP_06624512.1| asparagine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|227178930|gb|EEI59902.1| asparagine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257822960|gb|EEV49892.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257832042|gb|EEV58463.1| asparaginyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257836005|gb|EEV61079.1| asparaginyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|292643207|gb|EFF61348.1| asparagine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 432

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 32/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  WV   R  G I FL +RD     Q   V +      F+ AK++  E  + +
Sbjct: 13  VGETVTIGAWVANKRSSGKIAFLQLRDGTAFFQGVVVKSEVPEEVFQTAKNLHQETSVLV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   S             E+    +E++S + + P+     +E+       +R L L
Sbjct: 73  TGEIREDSRSKFG-------YEIGITNVEVVSESHDYPI---TPKEHGTDFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +        +F++   PILT S+PEG  D    +  +Q ++  
Sbjct: 123 RSSRQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F  Q++ L   
Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTHQEESLEVQ 239

Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283
           E     +++ V +       V               F RI YDDAI
Sbjct: 240 EQYVAFLVQNVLDHCEYALDVLGRDKEVLKTYTKLPFPRITYDDAI 285


>gi|255514166|gb|EET90428.1| asparaginyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 438

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 123/285 (43%), Gaps = 32/285 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73
           VG  V+L GW++R R  GGI+FL IRD  GI Q  A  DS     ++ A+    E  + +
Sbjct: 16  VGKKVKLRGWIYRKRTSGGILFLVIRDRTGIVQAAAKKDSIDKRSWDAAEKATIESSIEL 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V        +    TG  E+S    ++  ++E  P+  +   E    +    R L L
Sbjct: 76  SGTVKK------DERAPTG-FEVSVDSFKLTGLSEPFPITEYQSTE----LLLDKRHLWL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R   +   +  R+ I   +R     + F E + P++T+ + E   D        Q +F  
Sbjct: 125 RSMKMISIMKARSYIFRYLREFHDKKGFYEITPPLITSVAGETGADMFKVDYFGQEAF-- 182

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L ++ Q Y +  M    ++ +  AP FR E  R+ +   E++ L+ME +      +++  
Sbjct: 183 LTESSQPYAE-AMVYALEKVYSFAPSFRAEKSRTTKHLAEYWHLEMEAAHYNLKKLMDFE 241

Query: 254 ENVLRGVFEEFSNGN---------------TVSNNFLRICYDDAI 283
           E ++  V ++ ++ N                +   F R+ Y+ AI
Sbjct: 242 ERMVGSVAQKLADKNQDILAQLGVDPALLKKIKPPFKRLTYEQAI 286


>gi|147669196|ref|YP_001214014.1| lysyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|289432464|ref|YP_003462337.1| lysyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|189082959|sp|A5FRN5|SYK_DEHSB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|146270144|gb|ABQ17136.1| lysyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|288946184|gb|ADC73881.1| lysyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 498

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 136/284 (47%), Gaps = 32/284 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLV 77
           ++L+G +   R  G I F+DIRD  G  Q+     + D A  E+ K +     + ++G +
Sbjct: 56  LKLAGRIMTRRDMGKISFMDIRDGSGKMQIFFRQNDLDEASIELLKDLDLGDFIGVEGSL 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           M            TG+  L+A K+ +LS +  LPLP           R++ R+LDL  + 
Sbjct: 116 MRTR---------TGEPSLAATKVSMLSKSL-LPLPEKWHGLQDVEKRYRQRYLDLISNA 165

Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG----ARDFLVPSRVNQGSFY 192
              +  + R+R+I+ +R  M A+ F+E  TP+L    PE     AR F+   +     FY
Sbjct: 166 DARQTFLTRSRVISVIRAFMNAKGFLEVETPVL---QPEAGGALARPFITHHQALNCDFY 222

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  A + + + L+  GFDR ++I   FR+E   +   P EF  ++   ++    D+++ 
Sbjct: 223 -MRIALELHLKRLIVGGFDRVYEIGRIFRNEGISTRHNP-EFTMMESYQAYANYKDVMDF 280

Query: 253 MENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
           +E ++  V +E S G T+         +  + R+   DA+++Y 
Sbjct: 281 LEEMVSSVVKEISGGYTLPFGDITLDFTPPWPRLTMRDAVKQYA 324



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 27/43 (62%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A   GMPP GG+  GIDR+VML     ++REV LFP  ++  D
Sbjct: 451 ALAYGMPPTGGLGVGIDRLVMLFTNHDSIREVILFPALKDRED 493


>gi|315427092|dbj|BAJ48708.1| asparaginyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
 gi|315427123|dbj|BAJ48738.1| asparaginyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 429

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 20/254 (7%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSV 65
           CG +     GS V L GW+   R HG ++F+D+RD  G+ QV    A    A F+   S 
Sbjct: 5   CGRVKSLPDGSEVELRGWIRSKRHHGRLMFIDLRDGTGVVQVTLKAAEVPEADFQAVSSA 64

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESI 124
             E  L + G+V       ++     G  E+ A K+E++S + EE P+    ++      
Sbjct: 65  GRESALVVRGVV-------VHDPRAPGGAEVKAGKVELVSASLEEFPI----KKGVGPRF 113

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              +R L +R       +  R+ ++ S+R     E F+E   P    ++ EG        
Sbjct: 114 LSDHRHLAIRSPKAAAILRFRSNLLKSIRNWFEREGFVEVHCPTFITAAVEGGATLF--- 170

Query: 185 RVNQ-GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            VN  G    L Q+ Q Y++  + S   + + I P FR E  ++ R   EF+ ++ EM+F
Sbjct: 171 EVNYFGKKVYLTQSVQFYQEAAIYS-LGKVYSIQPSFRAERSKTRRHLTEFWHVEGEMAF 229

Query: 244 VEQDDILNTMENVL 257
              DD++  +E ++
Sbjct: 230 AGLDDLMKVVERLV 243



 Score = 38.5 bits (88), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + G  PH G   G++R+V  LLG KN+R   +FP +  
Sbjct: 388 KYGSVPHSGFGLGVERLVQWLLGLKNIRSAVMFPRTMT 425


>gi|126651186|ref|ZP_01723396.1| asparaginyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126592024|gb|EAZ86090.1| asparaginyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 431

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 115/286 (40%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73
           +G  V++  W+   R  G I FL +RD  G  Q V   +      F  AK +  E  + I
Sbjct: 13  IGETVKMGAWLANKRSSGKIAFLQLRDGSGFVQGVVVKEEVGEEIFATAKGLTQETSMYI 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V +    +          EL+   IE+L    + P+     +E+        R L L
Sbjct: 73  TGEVKADERSSFGC-------ELAVTGIEVLHTTTDFPI---TPKEHGPEFLMDNRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +         F +   PILT SSPEG  +       ++ +F  
Sbjct: 123 RSRKQHAIMKVRNEIIRATYEFFNNNGFTKMDPPILTGSSPEGTSELFHTKYFDEDAF-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L   
Sbjct: 181 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEFEENLEVQ 239

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284
           E  +  + +               + S    +   F RI YDDAI+
Sbjct: 240 EQYVTHIVQSVLANCKLELERLDRDTSKLENIKAPFPRISYDDAIK 285


>gi|254172086|ref|ZP_04878762.1| asparaginyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033982|gb|EEB74808.1| asparaginyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 430

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 129/292 (44%), Gaps = 31/292 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVR 66
           C D+     G  V+L+GWV+R R  G  +F+ +RD  GI QVV + +     +  AK + 
Sbjct: 7   CADVKPEMEGKRVKLAGWVYRKREVGKKVFIVLRDSSGIVQVVFSKELNEEAYREAKKLG 66

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  + I+G V +       A       E+ A K+E+L   +  P+      E+   +  
Sbjct: 67  IESSVIIEGTVKADPRAPTGA-------EVRADKLEVLQNVDFFPITKDASPEFLLDV-- 117

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR   +   +  +  ++ + R  ++ + + E   PIL   + EG          
Sbjct: 118 --RHLHLRSPKVASIMKVKATLVQAAREWLLQDGWYEVFPPILVTGAVEGGSTLFKLKYF 175

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           ++ ++  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E ++++ 
Sbjct: 176 DRYAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMDL 232

Query: 247 DDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283
            DI+   E ++           +   E F    T   N    F RI YD+AI
Sbjct: 233 WDIMKVEEELVSYMVQRALELRKSEIETFRKDLTTLKNAVPPFPRISYDEAI 284


>gi|227431883|ref|ZP_03913906.1| asparaginyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352350|gb|EEJ42553.1| asparaginyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 435

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 121/287 (42%), Gaps = 32/287 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSA--CFEIAKSVRSEWVLCI 73
           VG  V +  W+ + R  G I FL +RD     Q VVA  D +   FE AKS++ E  + +
Sbjct: 17  VGKTVTIGAWLRQKRGSGKIAFLQLRDGTAFFQGVVAKADVSEEVFETAKSLKQETSIYV 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +  +          E++   I+++  + + P+     +E+     F  R L L
Sbjct: 77  TGEIHEDARSSFG-------YEMAVSDIKVIGESHDYPIT---PKEHGTEFLFDERHLYL 126

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  ++ +       E F +   P+LT S+PEG  +        + +F  
Sbjct: 127 RHLKPFATLKIRNTLVAATYEFFNKEGFTKLDAPVLTGSAPEGTTELFETDYFGEPAF-- 184

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F++Q++ L   
Sbjct: 185 LSQTGQLYAEA-GAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAFMDQEESLKLQ 243

Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIR 284
           E  +  +  +    N    + L                R+ YDDA++
Sbjct: 244 ERYIAFLISKVLENNDQELDILKRDKDLLRSYTQLPYPRVSYDDAVK 290


>gi|294619950|ref|ZP_06699323.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291593807|gb|EFF25308.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1679]
          Length = 432

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 116/286 (40%), Gaps = 32/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  WV   R  G I FL +RD     Q   V +      F+ AK++  E  + +
Sbjct: 13  VGETVTIGAWVANKRSSGKIAFLQLRDGTAFFQGVVVKSEVPEEVFQTAKNLHQETSVLV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   S             E+    +E++S + + P+     +E+       +R L L
Sbjct: 73  TGEIREDSRSKFG-------YEIGITNVEVVSESHDYPI---TPKEHGTDFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +        +F++   PILT S+PEG  D    +  +Q ++  
Sbjct: 123 RSSRQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEGTTDLFETNYFDQKAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F  Q++ L   
Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTHQEESLEVQ 239

Query: 254 ENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAI 283
           E  +  + +   +                       F RI YDDAI
Sbjct: 240 EQYVAFLVQNILDHCEYALDVLGRDKEVLKTYTKLPFPRITYDDAI 285


>gi|119715425|ref|YP_922390.1| aspartyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|119536086|gb|ABL80703.1| aspartyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 424

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 111/262 (42%), Gaps = 20/262 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHR     C DL  +  GS VRL GWVHR R    + FL +RD  G+ QVV    SA   
Sbjct: 1   MHRT---LCSDLPAATPGSTVRLQGWVHRRRELSALTFLVVRDRSGLAQVVVRDGSAVPP 57

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQK-IEILSVAEELPLPVFGERE 119
              +V  E V        +     +   ++T   E +A   +E+     ++ LP      
Sbjct: 58  EETTV--EVVGTATANAQAPGGMELTDPVVTALTEPAATPPVELWRPGLDVVLPTL---- 111

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                   +  +  R              +   R  + A  F E  TP   AS+ E   +
Sbjct: 112 ------LDHAPVTWRHPRQRARWELAAASVRGFRATLDAAGFTEVQTPKFVASATESGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ L+   F+R +++ P FR E   + R   E+  LD+
Sbjct: 166 VFEVDYFGRPAYLA--QSPQFYKQQLVGV-FERVYEVGPVFRAEPHDTVRHLAEYVSLDV 222

Query: 240 EMSFV-EQDDILNTMENVLRGV 260
           E+ FV +  D+L+ + +VL G+
Sbjct: 223 ELGFVRDHRDVLSVLRDVLAGM 244



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 54/128 (42%), Gaps = 22/128 (17%)

Query: 445 WNEEEKKIDF--------AHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           W   E   DF        A  PF T P  G E    +         +DL+  G E+ +GG
Sbjct: 302 WALTEHGSDFVAVEGYPMAKRPFYTHPWPGEERWSNS---------FDLLFRGLELVTGG 352

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            R H       A    G         +    +AF+ GMPPHGG A G++R    L G  N
Sbjct: 353 QRLHRPSEYDAAIRARGEDPAA----YAPYLQAFEHGMPPHGGFAIGLERWTARLTGVAN 408

Query: 556 VREVSLFP 563
           +REV+LFP
Sbjct: 409 IREVTLFP 416


>gi|330718585|ref|ZP_08313185.1| asparaginyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 435

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 119/287 (41%), Gaps = 32/287 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSA--CFEIAKSVRSEWVLCI 73
           V   VR+  W+ + R  G I FL +RD     Q VV   D +   FEIAKS++ E  + +
Sbjct: 17  VNQTVRIGVWLRQKRGSGKIAFLQLRDGTAFFQGVVVKSDVSEETFEIAKSLKQETSMYV 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +             E++   IEI+  + + P+     +E+       +R L L
Sbjct: 77  TGEIHEDTRSDFG-------YEMAISGIEIVGESHDYPIT---PKEHGVDFLMDHRHLYL 126

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +I +       E F +  +PILT S+PEG  +        + ++  
Sbjct: 127 RHLKPFATLKIRNELIRATYEFFNKEGFTKLDSPILTGSAPEGTTELFETDYFGESAY-- 184

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F  Q++ L   
Sbjct: 185 LSQTGQLYAEA-GAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAFTTQEESLEVQ 243

Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIR 284
           E  +  + E     N    + L                R+ YDDAI+
Sbjct: 244 ERYISYLIESVLKNNEQELDILGRDKEVLRSYTQLPYPRLSYDDAIQ 290


>gi|259046851|ref|ZP_05737252.1| asparagine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036474|gb|EEW37729.1| asparagine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 433

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 122/289 (42%), Gaps = 38/289 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V++  WV   R  G I FL +RD     Q   V A+ +   FE+AK +  E  + +
Sbjct: 8   VGQTVKIGAWVTNKRSSGKIAFLQLRDGKAYFQGIVVKADVNEETFELAKGLTQESSVFV 67

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V   +   +         EL  + IE++  + E P+     +E+       +R L L
Sbjct: 68  TGVVQEDTRSKLG-------YELLVKDIELIGESHEYPIT---PKEHGTDFLMDHRHLWL 117

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +         FI+  +PIL+ ++ E + +        +  ++ 
Sbjct: 118 RSTKQHAIMEIRNAIIYASYEFFDKNGFIKFDSPILSGNAAEDSTELF------ETDYFG 171

Query: 194 LPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            P    Q  QL + +G   F R F   P FR E  ++ R   EF+ +D E  ++  D+ L
Sbjct: 172 EPAFLTQSGQLYLEAGAMAFGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYLYLTHDESL 231

Query: 251 NTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           +  E     +++GV +   +               +S  F RI YD+AI
Sbjct: 232 DLQEAYVKALIQGVLDRAPHALETLERDTELLKKYISEAFKRITYDEAI 280


>gi|222151349|ref|YP_002560505.1| asparaginyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222120474|dbj|BAH17809.1| asparaginyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 431

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 120/287 (41%), Gaps = 33/287 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q V   +S     F++AK +  E  L I
Sbjct: 13  VGQTVTIGAWILNKRSSGKIAFLQLRDGTGFMQAVVVKESIGEDLFKVAKGITQESSLFI 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++                 E+    +EI+  A + P+     + +       +R L L
Sbjct: 73  TGVIKEDERSDFG-------FEMEVTDLEIIHEAVDYPI---TPKAHGTDFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +       + F +   PILT S+PEG  +       ++ +F  
Sbjct: 123 RSKRQHAVMKIRNEIIRATYEFFNEQGFTKIDPPILTGSAPEGTSELFHTKYFDEDAF-- 180

Query: 194 LPQAPQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           L Q+ Q Y +   MA G  + F   P FR E  ++ R   EF+ ++ EM+F   +D L  
Sbjct: 181 LSQSGQLYMEAAAMAHG--KVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYRHEDSLEV 238

Query: 253 ME----NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284
            E    ++++ V +           + +    ++  F RI Y DAI+
Sbjct: 239 QEQYVTHLVKSVLKNCQLDLKILGRDTTKLEQITTPFPRITYTDAIK 285


>gi|117606291|ref|NP_001071079.1| aspartyl-tRNA synthetase, cytoplasmic [Danio rerio]
 gi|117167927|gb|AAI24801.1| Zgc:154056 [Danio rerio]
          Length = 531

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 155/357 (43%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVVANPDSACFEIAK---SVR 66
           DL +      + +   +H  R  G   FL +R   + +  ++A  D A  ++ K   ++ 
Sbjct: 80  DLTLEKAEQQIWVRARIHTSRAKGKQCFLVLRHQQFTVQALLAVGDRASKQMVKFAANIT 139

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF---------- 115
            E ++ ++ +V  +  E    +     +EL  ++I ++S +E  LPL +           
Sbjct: 140 KESIIDVEAVV--KKVEQKIESCSQQDVELHVERIFVISQSEARLPLQLEDAVRPEGEGD 197

Query: 116 --GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ +    R  +I + F+E  TP + +++
Sbjct: 198 EEGRATVNQDTRLDNRVIDLRTTTSQAIFRLQSGVCQLFRDTLINKGFVEIQTPKIISAA 257

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++  L Q+PQ YKQ+ + + FD+ F + P FR ED  + R   E
Sbjct: 258 SEGGANVFTVSYFKTSAY--LAQSPQLYKQMCICADFDKVFCVGPVFRAEDSNTHRHLTE 315

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+EM+F        D I +TM  + +G+ + F     TV+  +           LR
Sbjct: 316 FVGLDIEMAFSYHYHEVIDSITDTMVQIFKGLRDRFQTEIQTVNKQYPSEPFKFLEPTLR 375

Query: 277 ICYDDA---IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y +    +R  G    D+ DL  P   ++  + +    ++F V  K  L+V P Y
Sbjct: 376 LEYKEGLAMLRAAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 432



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H ++++ +   +  I  E ++        +F+ G PPH G   
Sbjct: 446 YDMFMRGEEILSGAQRIHDAQLLTERAMHHNIDLEKIK----AYIDSFRYGAPPHAGGGI 501

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 502 GLERVTMLYLGLHNVRQTSMFP 523


>gi|328466022|gb|EGF37199.1| asparaginyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 432

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 122/287 (42%), Gaps = 40/287 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      FE+AKS+R E    I G V
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVTDKVFEVAKSLRQESSFYITGTV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    ++++S  E  P+   G +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGIDFLLDHRHLWLRS-- 125

Query: 138 LHKNIVKRTRIINSMRCRMI----AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
             K      +I N+M    +     E+FI+   PI   S+PEG          +  ++  
Sbjct: 126 --KKPFAIMQIKNTMFKATVDFFEKEDFIKFDAPIFMHSAPEGTTQLFHVDYFDHDAY-- 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  
Sbjct: 182 LSQSGQLYGEA-GAMAFGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDLQ 240

Query: 254 ENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
           E  L  + ++  + N                T   NF+R+ YDDA++
Sbjct: 241 ERYLAYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFVRLPYDDAVK 287


>gi|256853714|ref|ZP_05559079.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256710657|gb|EEU25700.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T8]
          Length = 444

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 119/295 (40%), Gaps = 40/295 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  W+   R  G I FL +RD     Q VV  P+          +  F+  K +
Sbjct: 13  VGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQEIKHL 72

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G++   S             E+    +E++  +E+ P+     +E+     
Sbjct: 73  SQETSVMVTGVIKEDSRSKFG-------YEMDITDLEVVGASEDYPIT---PKEHGTDFL 122

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +      
Sbjct: 123 MDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFETDY 182

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q +F  L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM++  
Sbjct: 183 FGQPAF--LSQTGQLYAE-AGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTT 239

Query: 246 QDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIR 284
            ++ L+  E  ++ + +                       V   F RI YDDAI 
Sbjct: 240 HEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVLEPFKRITYDDAIE 294


>gi|238854630|ref|ZP_04644960.1| asparagine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664427|ref|ZP_05865279.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932979|ref|ZP_06338376.1| asparagine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472177|ref|ZP_07812669.1| asparagine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832420|gb|EEQ24727.1| asparagine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529548|gb|EEQ68549.1| asparagine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260561492|gb|EEX27464.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303014|gb|EFA95219.1| asparagine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 432

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 123/287 (42%), Gaps = 32/287 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           VG  V++  W+   R  G I+FL +RD     Q V    +     F++AKS+R E    I
Sbjct: 14  VGKEVKMHVWLTDKRSSGKIMFLQLRDGTAFFQGVLLKKDVSEEKFDLAKSLRQEASFYI 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++                 E+    +E++S  E+ P+   G +E+       +R L L
Sbjct: 74  TGVINEDERSHFG-------YEIKISDLELVSNTEDYPI---GNKEHGIDFLLDHRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +IN+       E FI+   PIL  S+PEG  +       +  ++  
Sbjct: 124 RSRRPFAIMQIRNEMINATYDFFKKEGFIKFDAPILMNSAPEGTTELFHIEYFDNDAY-- 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y ++  A  F + F   P FR E  ++ R   EF+ ++ EM++  QD+ L+  
Sbjct: 182 LSQSGQLYAEV-GAEAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAWTHQDESLDVQ 240

Query: 254 ENVLRGVFEEFSN---------GNTVSN-------NFLRICYDDAIR 284
           E  +  + +   +         G  V         N+ R+ YDDA++
Sbjct: 241 ERYISYLVKRVIDNCEYELNILGRDVEKLRPAAEGNYTRLKYDDAVK 287


>gi|157273325|gb|ABV27224.1| asparaginyl-tRNA synthetase [Candidatus Chloracidobacterium
           thermophilum]
          Length = 438

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 30/289 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWV 70
            + +G  V + GW++  R  G I+FL+IRD  GI Q +   ++   E+   A+S+  E  
Sbjct: 11  ATHLGEEVVIKGWLYNARSSGKILFLEIRDGSGIVQGIVAKNAVSEEVWERAESLTQESS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G                G  EL  + + I+ +  + P+     +E+       +R 
Sbjct: 71  IIVTGTPREHPKR-------PGVYELDVRDLTIVQLTHDYPI---TPKEHGIEFLMDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  ++ ++R  +  + FI   TPILT ++ EG          ++G 
Sbjct: 121 LWLRSKRQHAILRVRHEVVRAVRDFLDNDGFILADTPILTPAACEGTTTLFELDYFDEGK 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q+ Q Y +   A+ F + +   P FR E  ++ R   EF+ ++ E+++   DD++
Sbjct: 181 AY-LTQSGQLYNE-ATAAAFGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVAYATLDDMM 238

Query: 251 NTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284
              E  L  + E               + S    ++  F R+ YD+A++
Sbjct: 239 VLAERFLCFIVERILERRKEELTLLERDISKLEAIAPPFPRLSYDEAVQ 287


>gi|73984267|ref|XP_533339.2| PREDICTED: similar to Aspartyl-tRNA synthetase (Aspartate--tRNA
           ligase) (AspRS) isoform 1 [Canis familiaris]
          Length = 481

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 158/348 (45%), Gaps = 47/348 (13%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SV 65
            DL V      V +   VH  R  G   FL +R   + +  +VA  D A  ++ K   ++
Sbjct: 49  SDLTVHKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANI 108

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESI 124
             E ++ ++G+V  R       +     +EL  QKI ++S+AE  LPL      +  +++
Sbjct: 109 NKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPL------QLDDAV 160

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           R +        +T     V R +  I +  R  +I + F+E  TP + +++ EG  +   
Sbjct: 161 RPEVE----GEETSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFT 216

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   EF  LD+EM+
Sbjct: 217 VSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMA 274

Query: 243 FVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LRICYDDA--- 282
           F        ++I +T+  + +G+ + F     TV+  F           LR+ Y +A   
Sbjct: 275 FNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAM 334

Query: 283 IRRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           +R  G    D+ DL  P   ++  + +    ++F +  K  L+V P Y
Sbjct: 335 LREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 382



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E    +      +F+ G PPH G   
Sbjct: 396 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLE----KIKAYIDSFRFGAPPHAGGGI 451

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 452 GLERVTMLFLGLHNVRQTSMFP 473


>gi|126327787|ref|XP_001377539.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 479

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 116/256 (45%), Gaps = 22/256 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V++ GWV  VR    ++FL I D   +   Q+VA+P     ++      E    I G
Sbjct: 43  GENVKVQGWVRSVRSQKEVLFLHINDGSSLEHLQIVADPSLGSCDLTFGSSVE----IQG 98

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +++    +  N        EL A KIE++   +    P+  +  +P     +Y  L  R 
Sbjct: 99  ILVKSPYKKQNT-------ELKADKIEVIGRCDPQTFPIKYKERFPLEYIRQYPHLRCRT 151

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV---PSRVNQ--GS 190
           + L   +  R+   +++     A  +I   TP++T++  EGA +       S+V +   +
Sbjct: 152 NALGSILRVRSEATDAIHSFFKANGYIHIHTPVITSNDCEGAGELFQVEPSSKVKETGKN 211

Query: 191 FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ- 246
           F+ +P       QL   +M+  F + F   P FR E+ +S R   EFY ++ EMSFVE  
Sbjct: 212 FFDVPAFLTVSAQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEMSFVESL 271

Query: 247 DDILNTMENVLRGVFE 262
            D++  ME + +   E
Sbjct: 272 QDLMQIMETLFKTTTE 287



 Score = 37.4 bits (85), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 6/90 (6%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  E+  G +R     ++ Q    +G+      + +       Q G  PHGG   
Sbjct: 395 DLLVPGVGELFGGSLREERFHLLQQRLERLGLM-----DTYQWYLDLRQFGSVPHGGFGM 449

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R +  +LG  N+++V  FP   + C L
Sbjct: 450 GFERYLQCILGVDNIKDVIPFPRFPHSCLL 479


>gi|158313365|ref|YP_001505873.1| aspartyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158108770|gb|ABW10967.1| aspartyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 433

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 115/252 (45%), Gaps = 16/252 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V L+GWVHR R    + FL +RD  G  Q+V N      +I+  V  E V+ IDG  
Sbjct: 14  GEKVHLAGWVHRRRVLKNVTFLVLRDARGTAQIVVNEPDILSKIS-DVTEESVVEIDG-- 70

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFKYRFLDLRR 135
                + +      G +E+   +I ILS A   LP  +F    +    ++  +  L LR 
Sbjct: 71  -----QAVANPHAPGGVEVINPEIGILSEAVSPLPFEIFRPNLDVSLPVQLDHASLALRH 125

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-GARDFLVPSRVNQGSFYAL 194
                        +   R  + +E F E  TP + ASS E GA  F +      GS   L
Sbjct: 126 PRRQAIFRLAAASVAGFREALTSEGFTEVHTPKIVASSTESGANVFGIDYF---GSRAYL 182

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTM 253
            Q+PQ YKQ L+   F+R F++AP FR E   + R   E+  LD EM F+E    ++  +
Sbjct: 183 AQSPQFYKQTLVGV-FERVFEVAPVFRAEPHDTARHLAEYVSLDAEMGFIEDHHTVIKMV 241

Query: 254 ENVLRGVFEEFS 265
              +R + E+ S
Sbjct: 242 SLAVRHMVEKVS 253



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G E+ +GG R H     +QA +  G   E    ++      F+ GMPPHGG A 
Sbjct: 348 FDLLFRGLELVTGGQRLHRYTDYVQAITLRGEDPE----KYRAYIDTFRYGMPPHGGFAL 403

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R    L GA NVREV+LFP
Sbjct: 404 GLERWTARLTGAANVREVTLFP 425


>gi|163847001|ref|YP_001635045.1| asparaginyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222524823|ref|YP_002569294.1| asparaginyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|189083269|sp|A9WA97|SYN_CHLAA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|254782877|sp|B9LCU8|SYN_CHLSY RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|163668290|gb|ABY34656.1| asparaginyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222448702|gb|ACM52968.1| asparaginyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 440

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 122/285 (42%), Gaps = 30/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73
           VG  V L+GWV+     G +IF+ +RD  G  Q V    N     F  A+S+  E    I
Sbjct: 16  VGQRVTLAGWVYHKTEKGKLIFILLRDGSGTIQCVTFKKNVSEETFATAQSLTQESSCRI 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V  R+ E        G  EL  + IE++  + E P+     +E+       +R L +
Sbjct: 76  TGSV--RADER-----APGGYELDVESIELIGPSHEYPI---TPKEHGVEFLMAHRHLWV 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  +I + +  +  + F+   TPILTA++ EG  +       + G  Y 
Sbjct: 126 RSAKQHAILRIRAEVIAAAQEWLNEQGFVRFDTPILTATAAEGTTNLFATDYFDLGKAY- 184

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +  M + F + +   P FR E  ++ R   EF+ ++ E++F + +D +   
Sbjct: 185 LAQTGQLYVEAGMMA-FGKVYCFGPTFRAEKSKTRRHLTEFWMIEPEVAFADHEDNMRLQ 243

Query: 254 ENVLRGV-----------FEEFSNGNT----VSNNFLRICYDDAI 283
           E  +  +            +      T    V   F RI YD+AI
Sbjct: 244 EEFVSAIVARVLERRRDDLQTLERDTTLLEQVRPPFPRITYDEAI 288


>gi|315230963|ref|YP_004071399.1| asparaginyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183991|gb|ADT84176.1| asparaginyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 430

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 125/292 (42%), Gaps = 31/292 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVR 66
           C  +     G  VRL+GWV+R R     +F+ +RD  GI Q V   +     +E AK   
Sbjct: 7   CAQVKPEMEGKRVRLAGWVYRKREIKDKVFIVLRDSSGIIQTVFKEEISKEAYETAKKTG 66

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  + I+G V              G +E+ A KIE++   E  P+      E+   +  
Sbjct: 67  IESSVIIEGTVKQDKR-------APGGVEIQADKIEVIQNVEFFPITKDASPEFLLDV-- 117

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR   +   +  +  +I + R  ++ + + E   PIL   + EG          
Sbjct: 118 --RHLHLRSPKVAAIMKVKATMIQAAREWLLQDGWYEVFPPILVTGAVEGGATLFKLKYF 175

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           ++ ++  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E ++++ 
Sbjct: 176 DKTAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMDL 232

Query: 247 DDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283
            DI+   E ++           R   E +    T   N    F RI YD+AI
Sbjct: 233 WDIMKVEEELVSYMVQRTLELRRKEIEMYRKDFTTLKNTEPPFPRISYDEAI 284


>gi|217077430|ref|YP_002335148.1| asparaginyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217037285|gb|ACJ75807.1| asparaginyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 431

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 128/289 (44%), Gaps = 35/289 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           +G  V L GWV R R  G I F+++RD  GI QVV   ++ D   F+ A+ +R E  L +
Sbjct: 12  IGKEVELRGWVWRSRSSGKIAFINMRDGTGIVQVVVEASSVDEETFKNARKLRMESSLIV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF--KYRFL 131
            G V S            G +E+ A+++    +  ++P   F   +   SI +  ++R L
Sbjct: 72  RGTVKSEER-------APGGVEIHAKEV----IPVQIPTEDFPINKPDHSIDYLMEHRHL 120

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR       +  R  ++ ++R      +F++  TPI T +  E A +       + G  
Sbjct: 121 WLRSRRQMHILNIRDAVLRAIRKFYWENDFVQVDTPIFTGAIGESAGNLFEIDYFDYGKV 180

Query: 192 YALPQAPQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           Y L Q  Q Y +   MA G  R F + P FR E  ++ R   EF+  + E+++ E +D L
Sbjct: 181 Y-LAQTGQLYLEAACMALG--RVFNLGPTFRAEKSKTRRHLIEFWMNEAEVAYFEHEDNL 237

Query: 251 NTMENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284
              EN+               L  +  + S    +   F RI Y +A++
Sbjct: 238 KLQENLVSYIVKYVLENAREHLEALNRDISKLEKIEPPFPRITYTEAVK 286


>gi|256851160|ref|ZP_05556549.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260660584|ref|ZP_05861499.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282934626|ref|ZP_06339869.1| asparagine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297206025|ref|ZP_06923420.1| asparagine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|256616222|gb|EEU21410.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548306|gb|EEX24281.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281301201|gb|EFA93502.1| asparagine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297149151|gb|EFH29449.1| asparagine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 432

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 36/289 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           VG  V++  W+   R  G I+FL +RD     Q V    +     F++AKS+R E    I
Sbjct: 14  VGKEVKMHVWLTDKRSSGKIMFLQLRDGTAFFQGVLLKKDVSEEKFDLAKSLRQEASFYI 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++                 E+    +E++S  E+ P+   G +E+       +R L L
Sbjct: 74  TGVINEDERSHFG-------YEIKISDLELVSNTEDYPI---GNKEHGIDFLLDHRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +IN+       E FI+   PIL  S+PEG  +       +  ++  
Sbjct: 124 RSRRPFAIMQIRNEMINATYDFFKKEGFIKFDAPILMNSAPEGTTELFHIEYFDNDAY-- 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y ++  A  F + F   P FR E  ++ R   EF+ ++ EM++  QD+ L+  
Sbjct: 182 LSQSGQLYAEV-GAEAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAWTHQDESLDVQ 240

Query: 254 E------------------NVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           E                  N+L    E+         N+ R+ YDDA++
Sbjct: 241 ERYISYLVKRVIENCEYELNILGRDVEKLRPA--AEGNYTRLKYDDAVK 287


>gi|147919871|ref|YP_686378.1| asparaginyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|110621774|emb|CAJ37052.1| asparaginyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 430

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 25/292 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V++ GWV + R  G I+F  IRD  G  QV     + C +   ++R    L ++   
Sbjct: 16  GEEVQVGGWVVKNRSSGKIVFTVIRDSSGEIQVTTKKGNVCDD---ALREADALSLEAST 72

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           + +     +     G+ EL A  ++I+  + +   P+FGE   PE +    R L +R   
Sbjct: 73  IIKGKVRTDPRAPGGR-ELVATDVKIVGASRD--YPIFGEGHNPE-VLLDLRHLHIRSKE 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           L   +  +  +++S R    A  F E + PI+ +SS EG          ++ ++  L Q+
Sbjct: 129 LVAIMKVKDSVLSSCREWFRASGFYEVTPPIIMSSSCEGGSTLFELKYFDEKAY--LSQS 186

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV- 256
            Q Y + L+  G ++ + + P FR E  R+ R   E++ ++ EM++V   ++++ +E + 
Sbjct: 187 AQLYLESLIF-GLEKVYSVTPSFRAEKSRTTRHLAEYWHIEGEMAWVGLYEMIDMLEQLV 245

Query: 257 --------------LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
                         LR +  +      +   F RI YD+A++    D  D +
Sbjct: 246 SYVCNKTAEERHEELRMLGSDPEYFKNLKPPFPRITYDEAVKILQADGFDFK 297


>gi|295424854|ref|ZP_06817569.1| asparagine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065420|gb|EFG56313.1| asparagine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 432

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 120/283 (42%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSA--CFEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q VV N D +   FE AK++R E    I G V
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRNNDVSDEVFEAAKTLRQEASFYITGTV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                            E+    ++I+S  E  P+   G +E+       +R L LR   
Sbjct: 78  HKDERSHFG-------FEIQISDLKIVSNNEGYPI---GNKEHGIDFLLDHRHLWLRSKK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E FI+   PI   S+PEG       +  +  ++  L Q+
Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVNYFDHDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDLQERYL 244

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++  + N                T   NF+R+ YDDA++
Sbjct: 245 AYMVKQVLDNNEYELRILGRDPEKLRPTTEGNFVRLPYDDAVK 287


>gi|58337447|ref|YP_194032.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|58254764|gb|AAV43001.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
          Length = 414

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 116/283 (40%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      F+ AKS+R E    I G V
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVTDEVFQAAKSLRQEASFYITGTV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    ++++S  E  P+   G +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQITNLKVVSNNEGYPI---GNKEHGVDFLLDHRHLWLRSKK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E FI+   PI   S+PEG          N  ++  L Q+
Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNNDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++  + N                T   NF R+ YDDAI+
Sbjct: 245 AYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFTRLSYDDAIK 287


>gi|297529658|ref|YP_003670933.1| asparaginyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252910|gb|ADI26356.1| asparaginyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 431

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 123/286 (43%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I+FL +RD  G  Q V   AN     F+ AK++  E  L +
Sbjct: 13  VGQQVTIGAWLANKRSSGKIVFLQLRDGTGFIQGVAEKANVSEEVFQRAKTLTQETSLYV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V       I+     G  ELS   ++++  A + P+     +E+       +R L L
Sbjct: 73  TGTV------RIDERSPFG-YELSVADLQVIQEAVDYPI---TPKEHGVEFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +         F++   PILT S+PEG  +       ++ ++  
Sbjct: 123 RSRRQHAIMKIRNEIIRATYEFFNDRGFVKVDAPILTGSAPEGTTELFHTKYFDEDAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F E +D L   
Sbjct: 181 LSQSGQLYME-AAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMVEPEMAFYEFEDNLRLQ 239

Query: 254 EN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284
           E     +++ V E           + S    V   F R+ YD+AI+
Sbjct: 240 EEYVSYLVQSVLERCRLELGRLGRDVSKLELVKPPFPRLTYDEAIK 285


>gi|269126358|ref|YP_003299728.1| aspartyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268311316|gb|ACY97690.1| aspartyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 436

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 134/284 (47%), Gaps = 31/284 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR---SEWVLCIDGLV 77
           V + GWV+ +R    + F+ +RD  G+ Q+         E+ +++    +E  + I G V
Sbjct: 17  VTVCGWVNALRLQRKMQFVILRDPTGMVQITHKRGGEGDELEQAIEALTTESAVVITGRV 76

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLR-R 135
           +       N  +  G +E+  +++E++  AE  LP+      E+    R  +RFLD+R R
Sbjct: 77  VD------NPIVKLGGLEIVPERVEVVGKAEASLPIDEKSGMEH----RLDWRFLDIRLR 126

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
            +       +T     +R    AE F E  TP L  ++ E   +          ++ A  
Sbjct: 127 PSSRLLFDVQTTFEAGLREYAYAEGFTEMHTPKLMGTASESGAEVFKLGYFGGDAYLA-- 184

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ YKQ+ +A+G +R F+I P FR E   + R   EF  +D+EM+++  DD+ + M  
Sbjct: 185 QSPQFYKQMAVAAGIERVFEIGPVFRAEPSFTSRHATEFTGVDVEMAWI--DDVEDVM-- 240

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRR-YGTDKPDLRNPII 298
                FEE    + ++   +   + +AIR  YG    DL+ P +
Sbjct: 241 ----AFEERMLAHAIAK--VADVHGEAIREHYGV---DLKVPTV 275


>gi|56420706|ref|YP_148024.1| asparaginyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|56380548|dbj|BAD76456.1| asparaginyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 431

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 123/286 (43%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I+FL +RD  G  Q V   AN     F+ AK++  E  L +
Sbjct: 13  VGQQVTIGAWLANKRSSGKIVFLQLRDGTGFIQGVVEKANVSEEVFQRAKTLTQETSLYV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V       I+     G  ELS   ++++  A + P+     +E+       +R L L
Sbjct: 73  TGTV------RIDERSPFG-YELSVADLQVIQEAVDYPI---TPKEHGVEFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +         F++   PILT S+PEG  +       ++ ++  
Sbjct: 123 RSRRQHAIMKIRNEIIRATYEFFNDRGFVKVDAPILTGSAPEGTTELFHTKYFDEDAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F E +D L   
Sbjct: 181 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMVEPEMAFYEFEDNLRLQ 239

Query: 254 EN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284
           E     +++ V E           + S    V   F R+ YD+AI+
Sbjct: 240 EEYVSYLVQSVLERCRLELGRLGRDVSKLELVKPPFPRLTYDEAIK 285


>gi|227904083|ref|ZP_04021888.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227868102|gb|EEJ75523.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 432

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 116/283 (40%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      F+ AKS+R E    I G V
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVTDEVFQAAKSLRQEASFYITGTV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    ++++S  E  P+   G +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQITNLKVVSNNEGYPI---GNKEHGVDFLLDHRHLWLRSKK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E FI+   PI   S+PEG          N  ++  L Q+
Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNNDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++  + N                T   NF R+ YDDAI+
Sbjct: 245 AYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFTRLSYDDAIK 287


>gi|157363790|ref|YP_001470557.1| asparaginyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|157314394|gb|ABV33493.1| asparaginyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 431

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 125/296 (42%), Gaps = 29/296 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           +G  V L GWV  +R  G I FL  RD  G  QVV   ++     FE+A  +R E  + I
Sbjct: 12  IGQEVELRGWVWNIRSSGKIHFLQFRDGTGFVQVVVERSDVGEEVFEVASKLRIESSVII 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++               +E+ A+ I  + + EE P P+  ++++       YR L L
Sbjct: 72  RGKIVEDRRSPYG-------VEVHAKGIVPVQIPEE-PYPI-SKKDHGIDFLMSYRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  ++ ++R      NF+   TPI T +  E A +       + G  Y 
Sbjct: 123 RSRRQFHILKVRDAMLTAIRQFYRQRNFVLIDTPIFTGAIGESAGNLFELDYFDYGKVY- 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +      F + + + P FR E  ++ R   EF+  + E+++ E +D L   
Sbjct: 182 LTQTGQLYLE-AACMAFGKVYNLGPTFRAEKSKTRRHLIEFWMHEAEVAYYEHEDNLRLQ 240

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
           E ++  + +               + S    V   F RI YD+AI+    +  D+R
Sbjct: 241 EELVSYIVKYVLDNALEHLIALGRDVSKLEKVCVPFERITYDEAIKLLQKNGSDIR 296


>gi|329767021|ref|ZP_08258549.1| asparaginyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328837746|gb|EGF87371.1| asparaginyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 428

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 120/286 (41%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR---SEWVLCI 73
           +G  V L  W+   R  G I F  +R   G  Q +A  +S   E  + +R    E  L +
Sbjct: 10  LGQKVTLGAWIANKRSSGKIAFFQLRYGAGFIQAIALKESLGEERYQQLRHLPQETSLKV 69

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            GL+     E      ++G IEL  +  E++S A + P+     +E+        R + +
Sbjct: 70  TGLIKENERE------LSG-IELEIEDFEVISEAVDYPIT---PKEHGVEFLADNRHIWI 119

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R +II S       E F++   PILT+S+PEG  +       ++ ++  
Sbjct: 120 RSKKQHAILTIRNQIIKSTYDFFEKEGFLKTDPPILTSSAPEGTTELFNTKYFDEEAY-- 177

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD------ 247
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F   D      
Sbjct: 178 LSQSGQLYLEA-TAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEAEMAFCNHDESLALQ 236

Query: 248 ---------DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
                    D+L   +  L+ +  +          F RI Y DAI+
Sbjct: 237 EAFVNHLLTDVLEKCQEQLKVLGRDIEALENARGEFPRIKYKDAIK 282


>gi|325261859|ref|ZP_08128597.1| aspartate--tRNA ligase [Clostridium sp. D5]
 gi|324033313|gb|EGB94590.1| aspartate--tRNA ligase [Clostridium sp. D5]
          Length = 443

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 117/246 (47%), Gaps = 25/246 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            G+ VR++G VH +R  G + F+ +R   G+ Q V     + F + K ++    + + G+
Sbjct: 24  TGNRVRVNGAVHAIRDMGTVAFVILRKREGLIQCVFEEGVSKFSL-KELKEADTVEVTGI 82

Query: 77  VMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGER-EYPESIRFKYRFLDLR 134
                AE+  A      IE+  ++I++LS  AE LPLPV   R       +  YR + LR
Sbjct: 83  ----PAESEKA---PHGIEIRIEEIKVLSEPAEPLPLPVSKWRLNTSLEAKMNYRPISLR 135

Query: 135 RDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
                 NI +R +      I+   R  +  E F E  TP L A S EG  +       ++
Sbjct: 136 ------NIRERAKFRIQEGIVRGFRDFLYEEGFTEIHTPKLGAKSAEGGANLFRLEYFHR 189

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            +   L Q+PQ YKQ+ M   FDR F+ AP FR E   + R   E+  LD EM +++  +
Sbjct: 190 PAI--LQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 246

Query: 249 ILNTME 254
            +  ME
Sbjct: 247 DIMAME 252



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EI +GG R H    + +     G+++E +E        AF+ GMPPHGG
Sbjct: 355 TLSFDLLFRGMEITTGGQRIHDYHELKKKMEIRGMTEEGMEQYLS----AFKHGMPPHGG 410

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M +LG  NVRE +LFP
Sbjct: 411 LGIGLERLTMKILGEDNVREAALFP 435


>gi|229822933|ref|ZP_04449003.1| hypothetical protein GCWU000282_00225 [Catonella morbi ATCC 51271]
 gi|229787746|gb|EEP23860.1| hypothetical protein GCWU000282_00225 [Catonella morbi ATCC 51271]
          Length = 437

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 120/283 (42%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  WV   R  G I FL +RD     Q +   A+     F +AK +  E  + + G +
Sbjct: 22  VIIKAWVTNKRSSGKIAFLQLRDGSAYFQAIVVKADVSEETFALAKGLNQETSVKVVGKI 81

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            + +   +         EL  Q IE++  + + P+     +E+       +R L LR   
Sbjct: 82  QADTRSALG-------YELLVQDIEVIGESHDYPIT---PKEHGTDFLMDHRHLWLRSSK 131

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  II +    M  E  I+   PILT S+PEG  +       ++ +F  L Q+
Sbjct: 132 QHAIMQIRNEIIRATYEFMNQEGLIKVDPPILTGSAPEGTTELFHTKYFDEDAF--LSQS 189

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME--- 254
            Q Y +   A  F + F   P FR E  ++ R   EF+ +++E++FVE ++ L   E   
Sbjct: 190 GQLYLEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMMEVELAFVEHEENLQFQERYV 248

Query: 255 -NVLRGVFEEFSNGNTVSNN------------FLRICYDDAIR 284
            +++R V +         N             + RI Y DAI+
Sbjct: 249 AHLVRNVIDHCGLALKTLNRDVAVLEQYTKLPYPRISYTDAIK 291


>gi|282882559|ref|ZP_06291180.1| lysine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297701|gb|EFA90176.1| lysine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 637

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 125/244 (51%), Gaps = 16/244 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDG 75
           G  V ++G V   R HG I FLD++D+ G  QV A  D     +E  K +    ++ + G
Sbjct: 54  GKDVCIAGRVMSKRRHGKICFLDLQDYKGRIQVFARKDVLLENYEDVKGLDMGDIIGVKG 113

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V    A         G++ ++A+K+++LS + ++    F   + P+ +R++ R++DL  
Sbjct: 114 KVFKTEA---------GEVTVNAEKLDLLSKSLQILPEKFHGLKDPD-LRYRQRYVDLIV 163

Query: 136 DTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193
           +   K + +KRT+II ++R  +  + FIE  TPIL T +    AR FL            
Sbjct: 164 NPEIKEVFLKRTKIIKAIRQYLDEKGFIEVETPILGTVAGGANARPFLTHHNTLDIDM-Q 222

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  A + + + L+  GFD+ +++   FR+E   +   P EF  +++  ++V+ D+++   
Sbjct: 223 LRIANELFLKRLIVGGFDKVYEMGKMFRNEGMDTRHNP-EFTNIELYQAYVDMDEMMAIT 281

Query: 254 ENVL 257
           EN+ 
Sbjct: 282 ENIF 285



 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR++MLL    ++R++ LFP
Sbjct: 450 AIEVGLPPTGGLGIGVDRMIMLLTDQPSIRDIILFP 485


>gi|268325212|emb|CBH38800.1| aspartyl-tRNA synthetase, mid part [uncultured archaeon]
          Length = 147

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 3/145 (2%)

Query: 101 IEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE 159
           +++LS A + LPL   G+       RF  RF+DLR +      + R+  + ++R      
Sbjct: 1   MDVLSEASQVLPLDTTGKEGAELDTRFDARFMDLRTERTKHIFMIRSLTLKAIRDFFDER 60

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
             IE +TP + +++ EG       S   + +F  L Q+PQ YKQ+LMASGFDR ++IAP 
Sbjct: 61  GLIEINTPKIVSAATEGGTALFPISYFEREAF--LNQSPQLYKQILMASGFDRVYEIAPI 118

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFV 244
           FR E+  + +   E   +D+E++FV
Sbjct: 119 FRAEEHDTTKHLNEATSVDVELAFV 143


>gi|240102785|ref|YP_002959094.1| asparaginyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|259511571|sp|C5A4R8|SYN_THEGJ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|239910339|gb|ACS33230.1| Asparaginyl-tRNA synthetase (asnS) [Thermococcus gammatolerans EJ3]
          Length = 430

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 31/292 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVR 66
           C D+     G  V+L+GWV+R R  G  +F+ +RD  GI QVV + +     +  AK + 
Sbjct: 7   CADVKPEMEGKRVKLAGWVYRKREVGKKVFIVLRDSSGIVQVVFSKELNEEAYREAKKLG 66

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  + I+G V +       A       E+ A K++++   +  P+      E+   +  
Sbjct: 67  IESSVIIEGTVKADPRAPTGA-------EVQADKLQVIQNVDFFPITKDASPEFLLDV-- 117

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR   +   +  +  ++ + R  ++ + + E   PIL   + EG          
Sbjct: 118 --RHLHLRSPKVASIMKVKGTLMQAAREWLLQDGWYEVFPPILVTGAVEGGSTLFKLKYF 175

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           ++ ++  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E ++++ 
Sbjct: 176 DKTAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMDL 232

Query: 247 DDILNTMENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283
            DI+   E ++           R   E F    T   N    F RI YD+AI
Sbjct: 233 WDIMKVEEELVSYMVQRTLELRRSEIETFRKDLTTLKNAVPPFPRISYDEAI 284


>gi|218289169|ref|ZP_03493405.1| asparaginyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218240752|gb|EED07931.1| asparaginyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 431

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 125/286 (43%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           VG  V L GW++  R  G I FL +RD  G+ Q V   +N     F  + ++  E  L +
Sbjct: 14  VGQDVLLRGWLYNKRSSGKIHFLQVRDGTGLVQCVVVKSNVSDETFAASDALTQESSLVV 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           +G V   +          G  E+   +IE + +A E P+ +   +E+       +R L +
Sbjct: 74  EGTVRQDAR-------APGGYEIDVSRIEPVQLAHEYPIAL---KEHGIDFLLDHRHLWI 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  I  +++  + +  F     PILT +S E   + L  +R    + Y 
Sbjct: 124 RVPRQRAILRIRAEIERAIQAFLDSNGFTRVDAPILTPASCEDTTE-LFETRYFDDTAY- 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + +   PCFR E  ++ R   EF+ ++ EM+FVE ++ L   
Sbjct: 182 LTQSGQLYMEA-AAMALGKVYCFGPCFRAEKSKTRRHLIEFWMVEPEMAFVEHEENLRVQ 240

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284
           E+++  V +               + +    V   F R+ YDDAIR
Sbjct: 241 ESLVEHVVQSVIDRCAPELELLGRDIARLERVRAPFARMSYDDAIR 286


>gi|83033003|ref|XP_729287.1| aspartyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23486621|gb|EAA20852.1| aspartyl-tRNA synthetase, putative [Plasmodium yoelii yoelii]
          Length = 681

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 30/257 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-----ANPDSACFEIAKSVRSEWVLC 72
           GS + + G +H +R  G + F+ +R+     Q +      N D    +   ++  E ++ 
Sbjct: 232 GSNIWVRGRIHDIRSKGSLAFIILRNKIYSLQCILDIKNVNNDKNMIKWVSNLSLESIVD 291

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPV----FGEREYPESIR 125
           I G ++ +   +I++ II  +I++    ++I  +++   ELP  +      E     +IR
Sbjct: 292 IYGKLV-KPEISIDSTIIKYEIQI----LKIFCISKNSKELPFLLKDANMKETSDEATIR 346

Query: 126 ------FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R +DLR    +     ++ I    R  +I  NF E  TP L   S EG  +
Sbjct: 347 VNQDNRLNNRCIDLRTYANYSIFYLQSEICKIFRNYLIDNNFTEIHTPKLLGESSEGGAN 406

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               +  NQ  F  L Q+PQ YKQ+ + SGFDR F+IAP FR E+  + R   E+  LD+
Sbjct: 407 AFQINYFNQNGF--LAQSPQLYKQMCINSGFDRVFEIAPVFRAENSNTYRHLCEYVSLDV 464

Query: 240 EMSFVEQDDILNTMENV 256
           EM++       + MENV
Sbjct: 465 EMTYK-----YDYMENV 476



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R    +++L       +  +    +      +F     PH G   
Sbjct: 596 YDFFMRGEEILSGSQRISDVKLLLDNIKKFNLDPK----KLDFYIDSFAYSSYPHSGCGI 651

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++ML LG  N+R+ SLFP
Sbjct: 652 GLERVLMLFLGLNNIRKTSLFP 673


>gi|317128623|ref|YP_004094905.1| asparaginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315473571|gb|ADU30174.1| asparaginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 429

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 122/281 (43%), Gaps = 31/281 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V A  + + F++AK +  E  + + G+V
Sbjct: 16  VTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEESVFQLAKELTQESSIYVTGIV 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                   +    +G  EL+ Q+I+++  A++ P+     +E+       +R L LR   
Sbjct: 76  RE------DKRAPSG-YELTVQEIQVIHEAKDYPIT---PKEHGTEFLMDHRHLWLRSKR 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  II +       + F +   PILT SS EG  +       ++ ++  L Q+
Sbjct: 126 QHAIMRVRNEIIRATYEFFNEQGFSKVDPPILTGSSAEGTTNLFHTKYFDEDAY--LSQS 183

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F++ +D L   E  +
Sbjct: 184 GQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMDHEDSLVVQEQYV 242

Query: 258 RGVFE---------------EFSNGNTVSNNFLRICYDDAI 283
             V +               + S    +   F RI YD+AI
Sbjct: 243 SHVVQAVLANCKQELQALERDTSKLENIVAPFPRITYDEAI 283


>gi|42519125|ref|NP_965055.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|59798573|sp|Q74JA9|SYN_LACJO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|41583412|gb|AAS09021.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|329667340|gb|AEB93288.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 432

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 113/283 (39%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      FE AKS+R E    I G V
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVIRKNDVSEEVFEAAKSLRQEASFYITGTV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                            E+    +EI+S  E  P+   G +E+        R L LR   
Sbjct: 78  HEDKRSHFG-------YEIQISDLEIVSNNEGYPI---GNKEHGVDFLLDNRHLWLRSKR 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E FI+   PI   S+PEG          N  ++  L Q+
Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNNDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++    N                T   NF R+ YDDAI+
Sbjct: 245 AYMVKQVLENNEYELKILGRDPEKLRPTTEGNFTRLSYDDAIK 287


>gi|209155108|gb|ACI33786.1| Aspartyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 531

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 150/341 (43%), Gaps = 47/341 (13%)

Query: 27  VHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSEWVLCIDGLVMSRSA 82
           +H  R  G   FL +R   + +  +VA  + A  ++ K   ++  E ++ ++ +V  R  
Sbjct: 96  IHTSRAKGKQCFLVLRQQQFNVQALVAVGERASKQMVKFAANINKESIVDVEAMV--RKV 153

Query: 83  ETINANIITGQIELSAQKIEILSVAE-ELPLPVF------------GEREYPESIRFKYR 129
           E    +     +EL  ++I ++S AE  LPL +             G     +  R   R
Sbjct: 154 EQKIESCSQQDVELHIERIFVISQAEPRLPLQLEDCVRPEGEGDEDGRATVNQDTRLDNR 213

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            +DLR  T H     ++ +    R  +  + F+E  TP + +++ EG  +    S     
Sbjct: 214 VIDLRTTTSHAIFRLQSGVCQLFRDTLTNKGFVEIQTPKIISAASEGGANVFTVSYFKTS 273

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ--- 246
           ++  L Q+PQ YKQ+ + + FD+ F + P FR ED  + R   EF  LD+E++F      
Sbjct: 274 AY--LAQSPQLYKQMCICADFDKVFCVGPVFRAEDSNTHRHLTEFVGLDIELAFNYHYHE 331

Query: 247 --DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LRICYDDAI---RRYGT- 288
             + I +TM  + +G+ ++F     TV   +           LR+ Y + +   R  G  
Sbjct: 332 VIESITDTMVQIFKGLRDKFQTEIQTVGKQYSSEPFKFLEPTLRLEYTEGVAMLREAGVD 391

Query: 289 --DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
             D+ DL  P   ++  + +    ++F V  K  L+V P Y
Sbjct: 392 MGDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 432



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H ++++ +   +  I  E +++       +F+ G PPHGG   
Sbjct: 446 YDMFMRGEEILSGAQRIHDAQLLTERAIHHNIDLEKIKSYID----SFRYGAPPHGGGGI 501

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+VS+FP
Sbjct: 502 GLERVCMLYLGLHNVRQVSMFP 523


>gi|311030328|ref|ZP_07708418.1| asparaginyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 430

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 115/286 (40%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A  + + F+ AKSV  E  + +
Sbjct: 12  VGEEVTIGAWIANKRSSGKIAFLQLRDGSGFIQGVVVKAEVEESVFQAAKSVTQETSVYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V                 EL    +E++  A + P+     + +        R L L
Sbjct: 72  TGIVREDERSPFG-------YELGVTGVEVIHEAVDYPIT---PKNHGTEFLMDNRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  +I +         F +   PILT S+PEG  +       ++ ++  
Sbjct: 122 RSKKQHAIMKIRNEVIRATYEFFNDNGFSKVDPPILTGSAPEGTSELFATKYFDEDAY-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F E +D L   
Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYEFEDNLVVQ 238

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284
           E  +  + +               + S    +   F RI YDDAI+
Sbjct: 239 EQYVSFIVQSVVKNCKLELGILDRDVSKLEKIQAPFPRISYDDAIK 284


>gi|116334977|ref|YP_802472.1| aspartyl-tRNA synthetase [Candidatus Carsonella ruddii PV]
 gi|116235258|dbj|BAF35106.1| aspartyl-tRNA synthetase [Candidatus Carsonella ruddii PV]
          Length = 425

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 1/98 (1%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           +++II  +R      N++E   PI+   +  G++ FL+  +  +  F +L Q+PQ+ KQ 
Sbjct: 88  KSKIIYFIRLFFSINNYLELDIPIIEKYTSSGSKQFLIIDKNKKKYFLSLTQSPQKIKQY 147

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            M +  ++YFQIA CFRDED RS R+  EF Q+D+E S
Sbjct: 148 YMFNAINKYFQIAKCFRDEDSRSSRIK-EFQQIDIENS 184



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 20/121 (16%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           DF +++     KKI   H+ FT  +   ++   +     K+  YD+  NG EI  G IRN
Sbjct: 308 DFYYFK----NKKI--KHHQFTAFKNNFKNFYNS-----KSLAYDVFLNGIEIGGGSIRN 356

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
               +  + F N   SK+  +++F   Y+     +P H GIA G++RI+ LL+  KN+++
Sbjct: 357 INFLIQNKIFLN---SKK--KSKFINFYKR---ALPHHCGIAFGLERIISLLI-KKNIKK 407

Query: 559 V 559
            
Sbjct: 408 T 408


>gi|258511605|ref|YP_003185039.1| asparaginyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478331|gb|ACV58650.1| asparaginyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 431

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 124/286 (43%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           VG  VRL GW++  R  G I FL +RD  G+ Q V   +N     F  + ++  E  L +
Sbjct: 14  VGQDVRLRGWLYNKRSSGKIHFLQVRDGTGLVQCVVVKSNVSDETFAASDALTQESSLVV 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           +G V   +          G  E+  + IE + +A E P+ +   +E+       +R L +
Sbjct: 74  EGTVRQDAR-------APGGYEIDVRHIEPVQLAHEYPIAL---KEHGIDFLLDHRHLWI 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  I  +++  +    F     PILT +S E   + L  +R    + Y 
Sbjct: 124 RVPRQRAILRIRAEIECAIQAFLDNNGFTRVDAPILTPASCEDTTE-LFETRYFDDTAY- 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + +   PCFR E  ++ R   EF+ ++ EM+FVE ++ L   
Sbjct: 182 LTQSGQLYME-AAAMALGKVYCFGPCFRAEKSKTRRHLIEFWMVEPEMAFVEHEENLRVQ 240

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284
           E ++  V +               + +    V   F R+ YDDAIR
Sbjct: 241 EALVEHVVQSVIDRCAPELELLGRDIARLERVRAPFARMSYDDAIR 286


>gi|300814671|ref|ZP_07094922.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511290|gb|EFK38539.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 640

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 125/244 (51%), Gaps = 16/244 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDG 75
           G  V ++G V   R HG I FLD++D+ G  QV A  D     +E  K +    ++ + G
Sbjct: 54  GKDVCIAGRVMSKRRHGKICFLDLQDYKGRIQVFARKDILLENYEDVKGLDMGDIIGVKG 113

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V    A         G++ ++A+K+++LS + ++    F   + P+ +R++ R++DL  
Sbjct: 114 KVFKTEA---------GEVTVNAEKLDLLSKSLQILPEKFHGLKDPD-LRYRQRYVDLIV 163

Query: 136 DTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193
           +   K + +KRT+II ++R  +  + FIE  TPIL T +    AR FL            
Sbjct: 164 NPEIKEVFLKRTKIIKAIRQYLDDKGFIEVETPILGTVAGGANARPFLTHHNTLDIDM-Q 222

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  A + + + L+  GFD+ +++   FR+E   +   P EF  +++  ++V+ D+++   
Sbjct: 223 LRIANELFLKRLIVGGFDKVYEMGKMFRNEGMDTRHNP-EFTNIELYQAYVDMDEMMAIT 281

Query: 254 ENVL 257
           EN+ 
Sbjct: 282 ENIF 285



 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR++MLL    ++R++ LFP
Sbjct: 450 AIEVGLPPTGGLGIGVDRMIMLLTDQPSIRDIILFP 485


>gi|227890024|ref|ZP_04007829.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849468|gb|EEJ59554.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 432

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 113/283 (39%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      FE AKS+R E    I G V
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVIRKNDVSEEVFEAAKSLRQEASFYITGTV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                            E+    +EI+S  E  P+   G +E+        R L LR   
Sbjct: 78  HEDKRSHFG-------YEIQISDLEIVSNNEGYPI---GNKEHGVDFLLDNRHLWLRSKR 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E FI+   PI   S+PEG          N  ++  L Q+
Sbjct: 128 PFAIMQIRNTMFKATIDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVDYFNNDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++    N                T   NF R+ YDDAI+
Sbjct: 245 AYMVKQVLENNEYELKILGRDPEKLRPTTEGNFTRLSYDDAIK 287


>gi|268319458|ref|YP_003293114.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
 gi|262397833|emb|CAX66847.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
          Length = 432

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 113/283 (39%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      FE AKS+R E    I G V
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVIRKNDVSEEVFEAAKSLRQEASFYITGTV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                            E+    +EI+S  E  P+   G +E+        R L LR   
Sbjct: 78  HEDKRSHFG-------YEIQISDLEIVSNNEGYPI---GNKEHGVDFLLDNRHLWLRSKR 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E FI+   PI   S+PEG          N  ++  L Q+
Sbjct: 128 PFAIMQIRNTMFKATIDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNNDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++    N                T   NF R+ YDDAI+
Sbjct: 245 AYMVKQVLENNEYELKILGRDPEKLRPTTEGNFTRLSYDDAIK 287


>gi|166030609|ref|ZP_02233438.1| hypothetical protein DORFOR_00275 [Dorea formicigenerans ATCC
           27755]
 gi|166029611|gb|EDR48368.1| hypothetical protein DORFOR_00275 [Dorea formicigenerans ATCC
           27755]
          Length = 443

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 27/252 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G VH +R  G + F+ +R   G+ Q V    SA F++ K ++    L ++G V+ +
Sbjct: 27  VKVNGAVHTIRDMGTVAFVILRKREGLLQCVYEEGSATFDL-KEIKEASTLEVEG-VLEQ 84

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFK--YRFLDLRRDT 137
           + +  N       IE+  +K++ILS  E+  +P+   + +   S+  K  YR + LR   
Sbjct: 85  NEKAPNG------IEIRMKKVKILSQPEDEMMPLAISKWKLNTSLEAKLNYRSISLR--- 135

Query: 138 LHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
              NI +R +      +  + R  + ++ F E  TP + A S EG  +       ++ + 
Sbjct: 136 ---NIRERAKFRIQEGLTRAFRDFLYSQEFTEIHTPKIGAKSAEGGANLFKLEYFHRPA- 191

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDIL 250
             L Q+PQ YKQ+ M   FDR F+ AP FR E   + R   E+  LD E+ +++  +DI+
Sbjct: 192 -VLQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEIGYIDGFEDIM 249

Query: 251 NTMENVLRGVFE 262
                 L+   E
Sbjct: 250 GMETGFLQYAME 261



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EI +GG R H  + +L+     G++ E ++         F+ GMPPHGG
Sbjct: 355 TLSFDLLFRGLEITTGGQRIHDYQTLLKKIEVRGMTTEGMDQYLA----TFKHGMPPHGG 410

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M LLG  NVRE +LFP
Sbjct: 411 LGIGLERLTMQLLGEDNVRETTLFP 435


>gi|148654413|ref|YP_001274618.1| asparaginyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|172048101|sp|A5UPW5|SYN_ROSS1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148566523|gb|ABQ88668.1| asparaginyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 440

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 122/285 (42%), Gaps = 30/285 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCID 74
           G  V L+GWV      G ++F+ +RD  G+ Q V    N   A F  A+ +  E    I 
Sbjct: 17  GEVVTLAGWVVHKTEKGKLVFIRLRDGSGVIQCVVFRNNVTEATFAAAQQLTIESSCRIT 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V + +          G  EL    IEI+ +A E P+     +E+      ++R L +R
Sbjct: 77  GAVRADARA-------PGGFELDVNAIEIIQIAPEYPI---QPKEHGVEFLMEHRHLWIR 126

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
               H  +  R  II + +  +  + F+   TPILT  + EG  +       + G+ Y L
Sbjct: 127 SSKQHALLRIRAEIIAAAQEWLNDQGFVRFDTPILTPCAAEGTTNLFATPYFDLGTAY-L 185

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q  Q Y +  M S F + +   P FR E  ++ R   EF+ ++ E++F   +D L   E
Sbjct: 186 GQTGQLYVEAGMMS-FGKVYCFGPTFRAEKSKTRRHLTEFWMIEPEVAFALHEDNLALQE 244

Query: 255 NVLRGVFEEF-----SNGNTVSNN----------FLRICYDDAIR 284
             +  + +        +  T+  +          F RI YD+A++
Sbjct: 245 RFVSAIVQRVLERRADDLATLERDTKPLERCVPPFPRITYDEALK 289


>gi|119719540|ref|YP_920035.1| aspartyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524660|gb|ABL78032.1| aspartyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 421

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 116/246 (47%), Gaps = 26/246 (10%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAK--SVRSEWVLCIDGL-- 76
           + GWV  V+  G I F+++ D   ++   VV   DS   + +K  +V+    + + G+  
Sbjct: 7   IEGWVSNVKILGKIAFIEVIDGLNLSPITVVVRKDSGSVDWSKVSAVKLGSAIRVKGVYP 66

Query: 77  --VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR--FKYRFLD 132
             V+S+    I+A+           +IEIL+   +LP P+    + P S      YR+L 
Sbjct: 67  EKVVSKKGREIHAD-----------EIEILAEPRDLP-PIDVTGKTPASFEDYINYRYLA 114

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR   +    + R+ I+N +R       F+E  TP +  +  EG             ++ 
Sbjct: 115 LRLPRVRAAFLARSLIVNEIRSFFSERGFLEVHTPKIVKAGAEGGATLFEVDYFGVKAY- 173

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILN 251
            L Q+PQ YKQ+LM  G  R F+I P FR E   + R   E + LD+EM F++  +D+L 
Sbjct: 174 -LAQSPQLYKQMLMC-GVPRVFEIGPFFRAEKFSTTRHLNESWGLDVEMGFIKGMEDVLE 231

Query: 252 TMENVL 257
            +  ++
Sbjct: 232 VLSQLV 237



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 4/86 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           + + +DL   G E+ASGG R H  EV+ Q     G++ E     F     AF+ GMPPHG
Sbjct: 332 RGYAFDLDIRGIEVASGGQREHRYEVLRQNLLEKGLNPE----DFSFYLEAFKYGMPPHG 387

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   GIDR+VM  LG +N+RE  LFP
Sbjct: 388 GFGLGIDRLVMTFLGVQNIRETVLFP 413


>gi|238854245|ref|ZP_04644589.1| asparagine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238833056|gb|EEQ25349.1| asparagine--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 432

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 113/283 (39%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      FE AKS+R E    I G V
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFEAAKSLRQEASFYITGTV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                            E+    +EI+S  E  P+   G +E+        R L LR   
Sbjct: 78  HEDKRSHFG-------YEIQISDLEIVSNNEGYPI---GNKEHGVDFLLDNRHLWLRSKR 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E FI+   PI   S+PEG          N  ++  L Q+
Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNNDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++    N                T   NF R+ YDDAI+
Sbjct: 245 AYMVKQVLENNEYELRILGRDPEKLRPTTEGNFTRLPYDDAIK 287


>gi|164688109|ref|ZP_02212137.1| hypothetical protein CLOBAR_01754 [Clostridium bartlettii DSM
           16795]
 gi|164602522|gb|EDQ95987.1| hypothetical protein CLOBAR_01754 [Clostridium bartlettii DSM
           16795]
          Length = 439

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 28/255 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + L GWV+++     I+F+ +RD  GI Q+V N +                 I+GL +  
Sbjct: 27  ILLRGWVYKIIDLSNIVFVKLRDKSGIIQLVTNKEQ----------------IEGLKLEN 70

Query: 81  SAETINANIIT----GQIELSAQKIEIL--SVAEELPLPV--FGEREYPESIRFKYRFLD 132
           + E I          G IE+   +I+IL  +  ++LP  +  +  +   E+ +  +R + 
Sbjct: 71  AIEVIGKKSKNEKAPGGIEIIVDEIKILGRTYYDKLPFEINSYKNKAALET-QLDHRTIA 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LRR  +      +  I  + R  + ++NF +  T  +  SS EG  +    +  ++ SF 
Sbjct: 130 LRRPEIRAIFKVQNEIEQAFRDYLRSKNFEQIHTAKIIDSSTEGGSEMFTVNYFDRRSF- 188

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILN 251
            L Q+PQ YKQ+++ +GF+R ++I   +R E   + R   E+  LD+EM F++ + ++++
Sbjct: 189 -LAQSPQFYKQMMVGAGFERVYEIGHAYRAELHNTWRHLNEYVSLDVEMGFIKDEFELMD 247

Query: 252 TMENVLRGVFEEFSN 266
             E  L  +F+  + 
Sbjct: 248 LEEGFLDYLFKHLNK 262



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 32/147 (21%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP-FTMPQGGMESLKGNDLLS 476
           +++ +E G       EF ++  +P             A  P +TMP    ++L  +    
Sbjct: 316 DYVKKEYGT------EFVFLTKYPV------------AKRPMYTMPDDEDKTLTKS---- 353

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
                +DL+ +G EI +GG R +  E++ +     G++ E     F      F+ GMPPH
Sbjct: 354 -----FDLIYDGLEITTGGQRINDYEMLKENIIKFGLNPE----DFDFYLDTFKYGMPPH 404

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG A G++R+ M +L   N+RE +L P
Sbjct: 405 GGFAIGLERLTMKILKLSNIREATLVP 431


>gi|308161459|gb|EFO63904.1| Aspartyl-tRNA synthetase [Giardia lamblia P15]
          Length = 551

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 128/294 (43%), Gaps = 33/294 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-------------ANPDSACFEIAK 63
           VG  V +   +H VR  G   FL +R    I Q                +   A  +   
Sbjct: 90  VGHKVWIRARIHTVRATGKSAFLMLRGKMAILQACCFVPGKSEGPAEKVDEYRAMIKYIN 149

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122
           S+  E V+ + G + S  A    A+      EL  +KI  +S  A ++PL V  +   P+
Sbjct: 150 SLPPESVVEVYGSLSSVDAPIKTASAEHRDYELQLEKIYAISRAASQMPLQV-DDAMRPD 208

Query: 123 SI---------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
           S+               +  YR +DLR  T    +  R+ I++  R  +    FIE +TP
Sbjct: 209 SVYQAPDSQYVRPGKDTKQDYRVIDLRTPTNQAIMRVRSAIVHEFRSFLDKAGFIEINTP 268

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            + A + EG       +  N  +   L Q+PQ YKQ+ ++SGF R +++ P FR E+  +
Sbjct: 269 KIIAGTSEGGAAVFGVNYFNTKA--CLAQSPQLYKQMCISSGFGRVYEVGPVFRAENSHT 326

Query: 228 DRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
            R   EF  LD+EM   E   ++L  + ++++ +F+      +   + +R  YD
Sbjct: 327 HRHLCEFTGLDLEMEIYESYMEVLTLLGDLMKHIFKTVEARCSKEISIIRTQYD 380



 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E++ +      +  E + +       AF+ G  PHGG   
Sbjct: 466 YDMFIRGEEICSGAQRVHDPELLEKQCRERNVDPESLRSYID----AFKYGCAPHGGAGL 521

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G++RIVML+LG +N R+  LFP +Q 
Sbjct: 522 GLERIVMLMLGIENCRQTCLFPRTQE 547


>gi|116629669|ref|YP_814841.1| asparaginyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|282852213|ref|ZP_06261565.1| asparagine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311110688|ref|ZP_07712085.1| asparagine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|122273393|sp|Q043G9|SYN_LACGA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116095251|gb|ABJ60403.1| asparaginyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|282556632|gb|EFB62242.1| asparagine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311065842|gb|EFQ46182.1| asparagine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 432

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 113/283 (39%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      FE AKS+R E    I G V
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFEAAKSLRQEASFYITGTV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                            E+    +EI+S  E  P+   G +E+        R L LR   
Sbjct: 78  HEDKRSHFG-------YEIQISDLEIVSNNEGYPI---GNKEHGVDFLLDNRHLWLRSKR 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E FI+   PI   S+PEG          N  ++  L Q+
Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNNDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++    N                T   NF R+ YDDAI+
Sbjct: 245 AYMVKQVLENNEYELRILGRDPEKLRPTTEGNFTRLPYDDAIK 287


>gi|312379943|gb|EFR26079.1| hypothetical protein AND_08075 [Anopheles darlingi]
          Length = 281

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 3/121 (2%)

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +L  I++  YDLV NG EI  G IR H SE+  +   +V     +  +  G L  A   G
Sbjct: 164 ELFKIRSLAYDLVWNGVEIGGGSIRIHRSELQRRVLRDV---LNIEHDHLGHLLDALDSG 220

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG A G+DR V LL  A ++R+V  FP S +  D L  +P  +S E+ R   ++++
Sbjct: 221 CPPHGGFAIGLDRYVSLLCSAASIRDVIAFPKSLDGKDPLSKAPVPISEEEKRIYHIKVI 280

Query: 593 E 593
           E
Sbjct: 281 E 281


>gi|241889980|ref|ZP_04777278.1| asparaginyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863602|gb|EER67986.1| asparaginyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 428

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 120/286 (41%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR---SEWVLCI 73
           +G  V L  W+   R  G I F  +R   G  Q +A  +S   E  + +R    E  L +
Sbjct: 10  LGQKVTLGAWIANKRSSGKIAFFQLRYGAGFIQAIALKESLGEERYQQLRHLPQETSLKV 69

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            GL+     E      ++G IEL  +  E++S A + P+     +E+        R + +
Sbjct: 70  TGLIKENERE------LSG-IELEIEDFEVISEAIDYPIT---PKEHGVEFLADNRHIWI 119

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R ++I S       E F++   PILT+S+PEG  +       ++ ++  
Sbjct: 120 RSKKQHAILTIRNQVIKSTYDFFEKEGFLKTDPPILTSSAPEGTTELFNTKYFDEEAY-- 177

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD------ 247
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F   D      
Sbjct: 178 LSQSGQLYLEA-TAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEAEMAFCNHDESLALQ 236

Query: 248 ---------DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
                    D+L   +  L+ +  +          F RI Y DAI+
Sbjct: 237 EAYVNHLLTDVLEKCQEQLKVLGRDLEALENARGEFPRIKYKDAIQ 282


>gi|328957365|ref|YP_004374751.1| asparagine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673689|gb|AEB29735.1| asparagine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 432

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 124/286 (43%), Gaps = 32/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCI 73
           VG  V +  WV   R  G I FL +RD  G  Q +          F++AKS+  E  + +
Sbjct: 13  VGEEVEIGAWVANKRSSGKIAFLQLRDGSGFFQGIVVKSEVEEEVFQLAKSLNQETSILL 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++   +             E++ + I+++  + + P+     +E+       +R L L
Sbjct: 73  TGVIQEDARSKFG-------YEIAVKSIKVIGESHDYPIT---PKEHGTEFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +       E FI+   PILTA++ E + +       +Q +F  
Sbjct: 123 RSSKQHAIMRIRNEIIRATYNFFNEEGFIKVDPPILTANAAEDSTELFHTEYFDQEAF-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F++ +  L   
Sbjct: 181 LSQSGQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMDHEQSLEVQ 239

Query: 254 EN----VLRGVFEEFSNG-NTVSNN-----------FLRICYDDAI 283
           E     +++ V +   +  NT+  +           + RI YDDA+
Sbjct: 240 EKYVAYLIQSVLDNCDDALNTLERDKEVLKKYTELPYPRISYDDAV 285


>gi|308069459|ref|YP_003871064.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase)
           [Paenibacillus polymyxa E681]
 gi|305858738|gb|ADM70526.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase)
           [Paenibacillus polymyxa E681]
          Length = 431

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 119/285 (41%), Gaps = 31/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCI 73
           VG  V +  WV+  R  G I FL +RD  G  Q V        +I   AKS+  E  L +
Sbjct: 14  VGETVTIGAWVNNKRSSGKIQFLQLRDGSGYIQGVIVKSEVSEDIWNDAKSLTQESSLYV 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V                 EL+   IEI+ + E  P+     +E+       +R L L
Sbjct: 74  TGVVREEPRSQ-------SGFELTVTGIEIIHLTENYPIT---PKEHGVDFLMDHRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       ++ R  II +++       F +   PILT SS EG  +       ++ ++  
Sbjct: 124 RSAKQRAVLIVRAEIIRAVQEFFNGNGFTKVDPPILTPSSAEGTTELFHIKYFDEDAY-- 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ EM+FV+ ++ L   
Sbjct: 182 LTQSGQLYMEA-AAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVDHEESLRVQ 240

Query: 254 E--------NVLRGVFEEF-------SNGNTVSNNFLRICYDDAI 283
           E        +VL+   +E        S    +   F RI YD+AI
Sbjct: 241 EQFVSHIVQSVLKNCAKELETIGRDVSKLEQIQGEFPRITYDEAI 285


>gi|196006055|ref|XP_002112894.1| hypothetical protein TRIADDRAFT_56497 [Trichoplax adhaerens]
 gi|190584935|gb|EDV25004.1| hypothetical protein TRIADDRAFT_56497 [Trichoplax adhaerens]
          Length = 535

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 120/273 (43%), Gaps = 27/273 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH----YGITQVVANPDSACFEIAKSVR 66
           DL     G  V L   +H  R  G   FL +R       GI  V      A  + A +V 
Sbjct: 83  DLNEKVAGQSVLLRARLHNSRGKGKQCFLVLRQQSYSIQGIAAVSETVSKAMVKFASNVN 142

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAE-ELPLPVF-GEREYPES 123
            E V+ ++G+V    A T      + Q +EL   K+ + S+A   LPL +    R   +S
Sbjct: 143 KESVVDVEGIV---KAVTTKIEACSQQDVELHINKLFVASLAAPRLPLQIDDASRSVDQS 199

Query: 124 ------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILT 170
                        R   R +DLR  T          +    R  + ++ F+E  TP I++
Sbjct: 200 SEDSSLAHVNQDTRLDNRIIDLRTPTNQALFKLEAALCKLFRDHLTSKGFVEIHTPKIIS 259

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           A+S  GA  F V     +G  Y L Q+PQ YKQ+ +A  FDR F +   FR ED  + R 
Sbjct: 260 AASEGGANVFEVS--YFKGKAY-LAQSPQLYKQMAIAGDFDRVFTVGGVFRAEDSNTHRH 316

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
             EF  LD+EM+F E   ++L T+  +   +F+
Sbjct: 317 LCEFVGLDLEMAFYEHYHEVLETIGELFISIFK 349



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E + +      +  E ++        +F+ G  PH G   
Sbjct: 450 YDMFMRGEEILSGAQRIHDPEFLTERAKLHSVDLEKIK----AYIDSFKFGCFPHAGGGI 505

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++ML LG  N+R+ S+FP
Sbjct: 506 GMERVLMLYLGLDNIRKTSMFP 527


>gi|317495209|ref|ZP_07953579.1| asparaginyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914631|gb|EFV36107.1| asparaginyl-tRNA synthetase [Gemella moribillum M424]
          Length = 428

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 120/286 (41%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR---SEWVLCI 73
           +G  V L  W+   R  G I F  +R   G  Q +A  +S   E  + +R    E  L +
Sbjct: 10  LGEKVTLGAWIANKRSSGKIAFFQLRYGAGFVQAIALKESLGEEKYQQLRHLPQETSLKV 69

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            GLV     E      ++G IEL  +  E++S A + P+     +E+        R + +
Sbjct: 70  TGLVKENDRE------LSG-IELEIESFEVISEAIDYPIT---PKEHGVEFLADNRHIWI 119

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R +II +       E FI+   PILT+S+PEG  +       ++ ++  
Sbjct: 120 RSKKQHAILTIRNQIIKATYDFFEKEGFIKTDPPILTSSAPEGTTELFNTKYFDEEAY-- 177

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ------- 246
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F          
Sbjct: 178 LSQSGQLYLE-ATAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEAEMAFCNHAESLALQ 236

Query: 247 --------DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
                    ++L   +  L+ +  +    N     F RI Y DAI+
Sbjct: 237 EAYVNYLLTEVLEKCQEQLKILGRDLEALNNARGEFPRIRYKDAIK 282


>gi|256752945|ref|ZP_05493774.1| nucleic acid binding OB-fold tRNA/helicase-type
          [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748178|gb|EEU61253.1| nucleic acid binding OB-fold tRNA/helicase-type
          [Thermoanaerobacter ethanolicus CCSD1]
          Length = 89

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/78 (51%), Positives = 54/78 (69%), Gaps = 2/78 (2%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
          RTH CG+L V DV  +V + GWV R R HGG++F+D+RD  GI QVV + +  S  FE  
Sbjct: 10 RTHMCGELTVEDVDKYVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFSNEVSSEAFEKV 69

Query: 63 KSVRSEWVLCIDGLVMSR 80
          +SVRSE+VL I+G V+ +
Sbjct: 70 QSVRSEYVLAIEGKVVKK 87


>gi|217033561|ref|ZP_03438990.1| hypothetical protein HP9810_905g80 [Helicobacter pylori 98-10]
 gi|216944086|gb|EEC23517.1| hypothetical protein HP9810_905g80 [Helicobacter pylori 98-10]
          Length = 117

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/110 (34%), Positives = 65/110 (59%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYERALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEI 111


>gi|261417990|ref|YP_003251672.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767197|ref|YP_004132698.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374447|gb|ACX77190.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112063|gb|ADU94555.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 431

 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 122/286 (42%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
            G  V +  W+   R  G I+FL +RD  G  Q V   AN     F+ AK++  E  L +
Sbjct: 13  AGQQVTIGAWLANKRSSGKIVFLQLRDGTGFIQGVVEKANVSEEVFQRAKTLTQETSLYV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V       I+     G  ELS   ++++  A + P+     +E+       +R L L
Sbjct: 73  TGTV------RIDERSPFG-YELSVADLQVIQEAVDYPI---TPKEHGVEFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +         F++   PILT S+PEG  +       ++ ++  
Sbjct: 123 RSRRQHAIMKIRNEIIRATYEFFNDRGFVKVDAPILTGSAPEGTTELFHTKYFDEDAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F E +D L   
Sbjct: 181 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMVEPEMAFYEFEDNLRLQ 239

Query: 254 EN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284
           E     +++ V E           + S    V   F R+ YD+AI+
Sbjct: 240 EEYVSYLVQSVLERCRLELGRLGRDVSKLELVKPPFPRLTYDEAIK 285


>gi|213512448|ref|NP_001134011.1| Aspartyl-tRNA synthetase, cytoplasmic [Salmo salar]
 gi|209156148|gb|ACI34306.1| Aspartyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 531

 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 154/357 (43%), Gaps = 47/357 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           +L     G  + +   +H  R  G   FL +R   + +  +VA  + A  ++ K   ++ 
Sbjct: 80  ELTPEKAGQLIWVRARIHTSRAKGKQCFLVLRQQQFNVQALVAVGERASKQMVKFAANIN 139

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF---------- 115
            E ++ ++ +V  +  E    +     +EL  ++I ++S AE  LPL +           
Sbjct: 140 KESIVDVEAVV--KKVEQTIESCSQQDVELHIERIFVISQAEPRLPLQLEDCVRPEGEGD 197

Query: 116 --GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ +    R  +  + F+E  TP + +++
Sbjct: 198 EDGRATVNQDTRLDNRVIDLRTTTSQAIFRLQSGVCQLFRDTLTNKGFVEIQTPKIISAA 257

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + FD+ F + P FR ED  + R   E
Sbjct: 258 SEGGANVFTVSYFKTSAYLA--QSPQLYKQMCICADFDKVFCVGPVFRAEDSNTHRHLTE 315

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF-----------LR 276
           F  LD+E++F        + I +TM  + +G+ ++F     TV   +           LR
Sbjct: 316 FVGLDIELAFNYHYHEVIESITDTMVQIFKGLRDKFQTEIQTVGKQYPSEPFKFLEPTLR 375

Query: 277 ICYDDAI---RRYGT---DKPDLRNP--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + Y + +   R  G    D+ DL  P   ++  + +    ++F V  K  L+V P Y
Sbjct: 376 LEYSEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFY 432



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H ++++ +   +  I  E +++       +F+ G PPHGG   
Sbjct: 446 YDMFMRGEEILSGAQRIHDAQLLTERAMHHNIDLEKIKSYID----SFRYGAPPHGGGGI 501

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 502 GLERVCMLYLGLHNVRQTSMFP 523


>gi|312090413|ref|XP_003146606.1| aspartyl-tRNA synthetase [Loa loa]
 gi|307758228|gb|EFO17462.1| aspartyl-tRNA synthetase [Loa loa]
          Length = 576

 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 151/361 (41%), Gaps = 52/361 (14%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           D+  S  G  + + G +H  R  G   F+ IR       G+  V         +   ++ 
Sbjct: 122 DVLASLEGQEIWIRGRLHTSRIKGKTCFIIIRQRMCSIQGMLFVGEEISKQMLKFVGNIS 181

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES-- 123
            E ++ I G+V  +  E    +    ++EL   ++ ++S AE  LPL +       E   
Sbjct: 182 KESIIDIRGVV--KKVEQKITSCTQKEVELHVTQLFVVSAAEPRLPLQIEDAARLKEEDK 239

Query: 124 -------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-IL 169
                         R   R LDLR  T H     +  +    R  +    F+E  TP I+
Sbjct: 240 NTEESSLSVVNLDTRLDNRVLDLRTQTSHAIFSIQDGVCELFRNTLKKRGFMEIHTPKII 299

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
           +A+S  GA  F V     +GS Y L Q+PQ YKQ+ +A+ FDR F I   FR ED  + R
Sbjct: 300 SAASEGGANVFEVS--YFKGSAY-LAQSPQLYKQMAIAADFDRVFTIGAVFRAEDSNTHR 356

Query: 230 LPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNG-----NTVSNNF--------- 274
              EF  LD+EM+F     ++L  +  V+  +F++          TV   +         
Sbjct: 357 HLTEFVGLDIEMAFKFHYHEVLEMIAAVMIDIFKDLKAKFKYEIETVGKQYPCEPFEFVE 416

Query: 275 --LRICYDDAI---RRYGT---DKPDLRNPI--IMHNVTEHFVHSEFRVFSKI-LSVNPG 323
             + + Y DA+   R  G    D+ DL  P+   +  + +   H++F V  +  L+V P 
Sbjct: 417 PAVILKYSDAVKLLRENGVEIGDEDDLSTPVERFLGRLVKEKYHTDFYVLDRYPLAVRPF 476

Query: 324 Y 324
           Y
Sbjct: 477 Y 477



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H + ++ +   +  I  E +         +F+ G PPH G   
Sbjct: 491 YDMFMRGEEILSGAQRIHDASLLTERAKHHQIDLEKIR----AYIDSFKYGCPPHAGGGI 546

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR  SLFP
Sbjct: 547 GLERVTMLFLGLGNVRLASLFP 568


>gi|172057782|ref|YP_001814242.1| asparaginyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171990303|gb|ACB61225.1| asparaginyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 432

 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 117/285 (41%), Gaps = 30/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73
           VG  + +  W+   R  G I+FL +RD  G  Q V   ++     F+ AK +  E  + +
Sbjct: 12  VGEEITIGCWLANKRSSGKIVFLQLRDGSGFMQGVVVKETVGEELFKTAKGLTQETSMWV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G + S    T   +      E+    IE++  A + P+     + +        R L L
Sbjct: 72  TGTIKSDGGRTAIGH------EMEITTIEVIHEAVDYPIT---PKAHGTDFLMDNRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +V R  +I +       E FI+   PILT S+PEG  +       ++ ++  
Sbjct: 123 RSKRQHAVMVVRNELIRATYEFFNQEGFIKVDPPILTGSAPEGTTELFHTKYFDEDAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F + D  L   
Sbjct: 181 LSQSGQLYME-AAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMMEPEMAFYDHDMNLEVQ 239

Query: 254 ENVL-----------RGVFEEFSNGNTVSNN----FLRICYDDAI 283
           EN +           R   E      TV  N    F R+ Y +AI
Sbjct: 240 ENYVSHLVQSALKNCRPELELLERDLTVLENIQAPFPRVKYTEAI 284


>gi|68069109|ref|XP_676465.1| aspartyl-tRNA synthetase [Plasmodium berghei strain ANKA]
 gi|56496176|emb|CAI00406.1| aspartyl-tRNA synthetase, putative [Plasmodium berghei]
          Length = 571

 Score = 84.3 bits (207), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 121/255 (47%), Gaps = 26/255 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-----ANPDSACFEIAKSVRSEWVLC 72
           GS + + G +H +R  G + F+ +R+     Q +      N D    +   ++  E ++ 
Sbjct: 122 GSCLWVRGRIHDIRSKGSLAFIILRNKIYSLQCILDIKNVNNDKNMIKWVNNLSLESIVD 181

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPV----FGEREYPESIR-- 125
           I G ++ +   +I++ II  + E+   KI  +S  ++ELP  +      E +   +IR  
Sbjct: 182 IYGKLV-KPEISIDSTII--KYEIHILKIFCISKNSKELPFLLKDANMKEIDDEATIRVN 238

Query: 126 ----FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                  R +DLR    +     ++ I    R  +I  NF E  TP L   S EG  +  
Sbjct: 239 QDNRLNNRCIDLRTYANYSIFYLQSEICKIFRNYLIDNNFTEIHTPKLLGESSEGGANAF 298

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
             +  NQ  F  L Q+PQ YKQ+ + SGFDR F+IAP FR E+  + R   E+  LD+EM
Sbjct: 299 QINYFNQNGF--LAQSPQLYKQMCINSGFDRVFEIAPVFRAENSNTYRHLCEYVSLDVEM 356

Query: 242 SFVEQDDILNTMENV 256
           ++       + MENV
Sbjct: 357 TYK-----YDYMENV 366



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R    +++L       +  +    +      +F     PH G   
Sbjct: 486 YDFFMRGEEILSGSQRISDVKLLLDNIKKFNLDPK----KLDFYIDSFAYSSYPHSGCGI 541

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++ML LG  N+R+ SLFP
Sbjct: 542 GLERVLMLFLGLNNIRKTSLFP 563


>gi|167462236|ref|ZP_02327325.1| asparaginyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 432

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 123/285 (43%), Gaps = 31/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  VR+  W+H  R  G I FL +RD  G  Q   V +  +   ++ A  +  E  L +
Sbjct: 14  VGQSVRIGCWLHNKRSSGKIQFLQLRDGSGFIQGVVVKSEVNEQVWDAASKLTQESSLYV 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V  R  +   +       EL+   +EI+ +  E P+     +E+       +R L L
Sbjct: 74  TGTV--REDDRSQSGF-----ELTVDHVEIIQITHEYPV---TPKEHGVDFLMDHRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +V R++II +++       F    TPILT SS EG  +       ++ ++  
Sbjct: 124 RAPRQRAIMVIRSQIIRAVQEYFDERGFHLVDTPILTPSSCEGTTNLFHTKYFDEDAY-- 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    R +   P FR E  ++ R   EF+ ++ EM+FVE ++ L   
Sbjct: 182 LTQSGQLYIEA-AAMALGRVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEHEESLRIQ 240

Query: 254 E----NVLRGVF-----------EEFSNGNTVSNNFLRICYDDAI 283
           E    ++++ V             + S        F RI YD+A+
Sbjct: 241 EEFVAHIIKSVLTHCQKELKVLGRDTSKLEACVTPFPRIAYDEAV 285


>gi|322381866|ref|ZP_08055820.1| asparaginyl-tRNA synthetase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321154254|gb|EFX46576.1| asparaginyl-tRNA synthetase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 427

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 123/285 (43%), Gaps = 31/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  VR+  W+H  R  G I FL +RD  G  Q   V +  +   ++ A  +  E  L +
Sbjct: 9   VGQSVRIGCWLHNKRSSGKIQFLQLRDGSGFIQGVVVKSEVNEQVWDAASKLTQESSLYV 68

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V  R  +   +       EL+   +EI+ +  E P+     +E+       +R L L
Sbjct: 69  TGTV--REDDRSQSGF-----ELTVDHVEIIQITHEYPV---TPKEHGVDFLMDHRHLWL 118

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +V R++II +++       F    TPILT SS EG  +       ++ ++  
Sbjct: 119 RAPRQRAIMVIRSQIIRAVQEYFDERGFHLVDTPILTPSSCEGTTNLFHTKYFDEDAY-- 176

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    R +   P FR E  ++ R   EF+ ++ EM+FVE ++ L   
Sbjct: 177 LTQSGQLYIEA-AAMALGRVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEHEESLRIQ 235

Query: 254 E----NVLRGVF-----------EEFSNGNTVSNNFLRICYDDAI 283
           E    ++++ V             + S        F RI YD+A+
Sbjct: 236 EEFVAHIIKSVLTHCQKELKVLGRDTSKLEACVTPFPRIAYDEAV 280


>gi|57234556|ref|YP_181416.1| universal stress protein [Dehalococcoides ethenogenes 195]
 gi|57225004|gb|AAW40061.1| universal stress protein family [Dehalococcoides ethenogenes 195]
          Length = 296

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 40/77 (51%), Positives = 55/77 (71%), Gaps = 3/77 (3%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
          +THSC  L   ++G+ V L+GWVHR R HGG+IF+D+RD  GI QVV NP+  +AC +I 
Sbjct: 3  KTHSCA-LTQENIGTEVTLAGWVHRRRDHGGVIFIDLRDREGIVQVVFNPEQSAACLDIG 61

Query: 63 KSVRSEWVLCIDGLVMS 79
          K +RSE+VL + G+  S
Sbjct: 62 KELRSEYVLQVKGIKSS 78


>gi|171185237|ref|YP_001794156.1| lysyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170934449|gb|ACB39710.1| lysyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 482

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 126/287 (43%), Gaps = 26/287 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  VR +G V  VR H  ++F+D+ +     QV+A+P     E    V     L ++G 
Sbjct: 54  VGLVVRTAGRVTDVRRHPNVVFIDLYEDGARFQVMADPKLPGVE---GVWRGDFLGVEGA 110

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++             G   + A  + +L+ A + PLP +G+ +       +YR + +  D
Sbjct: 111 IVKTQ---------RGDYAVKASSLILLAKAVQ-PLPEWGKVDRDSPFYMRYRSVAMVLD 160

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
             L   I  R R I ++R  M    FIE  TP+L        AR F          +Y L
Sbjct: 161 LQLRWRIAARARFIQALREAMWKRGFIEIPTPVLQPIYGGAAARPFTTKIWAIDEEWY-L 219

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ Y +  + +GF + F++ P FR+ED  +   P EF+ L+   ++ + +D++   E
Sbjct: 220 RISPELYLKRYIIAGFPKVFEVGPQFRNEDIDALHNP-EFWSLEAYQAYADYNDMMRLTE 278

Query: 255 NVL---------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
            V+          GV +        S  + RI   DA+R YG   PD
Sbjct: 279 EVVYEAVSAVLGTGVVKYRDQTINFSPPWRRITLHDALREYGGVDPD 325



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 26/36 (72%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           GMPP GG+  G+DR+ M++  A+++++V  +P+ + 
Sbjct: 446 GMPPTGGVGIGVDRLAMVITNAESIKDVIPYPIVKR 481


>gi|170017007|ref|YP_001727926.1| asparaginyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|169803864|gb|ACA82482.1| Asparaginyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 435

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 32/287 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SACFEIAKSVRSEWVLCI 73
           VG  V++  W+ + R  G I FL +RD     Q VVA  D   + F++ KS++ E  L +
Sbjct: 17  VGQTVKIGAWLRQKRGSGKIAFLQLRDGTAFFQGVVAKADVPESVFDVVKSLKQETSLYV 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +      +          E++   +EI+  + + P+     +E+     F  R L L
Sbjct: 77  VGEIHEDERSSFG-------YEIAISDVEIIGESHDYPIT---PKEHGTEFLFDERHLYL 126

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +I +         F +  +P+LT S+PEG  +        + +F  
Sbjct: 127 RHLKPFATLKIRNTLIAATYEFFNERGFTKLDSPLLTGSAPEGTTELFETDYFGEPAF-- 184

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L   
Sbjct: 185 LSQTGQLYAEA-GAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMVEPEMAFMHQEESLEIQ 243

Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIR 284
           E  +  +  +    N    + L                R+ YDDAI+
Sbjct: 244 EAYIAFLIAKVLERNEQELDILERDKDLLRSYTELPYPRVSYDDAIK 290


>gi|317123807|ref|YP_004097919.1| aspartyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315587895|gb|ADU47192.1| aspartyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 451

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 122/298 (40%), Gaps = 24/298 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           DL     GS   L+GWVHR R    + F+ +RD  G+ QVV   DS       +V  E V
Sbjct: 19  DLAALPDGSPAVLAGWVHRRRSLASVTFVIVRDRSGLAQVVVK-DSDVLVGLANVPEETV 77

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G V+   A    A ++   I    +      V  EL  P FG           +  
Sbjct: 78  VEVSGRVVHNPAAPGGAELVDPTIVPLTEPAAPPPV--ELWRPTFGAG---LPTHLDHAA 132

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           + LR           +  +   R  +   +F E +TP L  ++ E   +        + +
Sbjct: 133 VTLRHPRHRAAWEVASASMRGFRSALTGLDFTEIATPKLVGTATESGANVFEVDYFGRPA 192

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDI 249
           + A  Q+PQ YKQ+L+   F+R F++ P FR E   + R   ++  LD E+ F+ +  D+
Sbjct: 193 YLA--QSPQLYKQMLVGV-FERVFEVGPVFRAEPHDTVRHLAQYTSLDAELGFIRDHRDV 249

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLR------------ICYDDAIRRYGTD--KPDL 293
           L  +   L G+ E        + + L             I + DA+   G D  +PDL
Sbjct: 250 LAVLRAALAGMVEAVGTYAAEAASLLSLHLPQVPAKLPVIHFRDALALVGADPAEPDL 307



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 56/113 (49%), Gaps = 7/113 (6%)

Query: 454 FAHNPF-TMPQG-GMESLKGNDLLSIKAF-QYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
            A  PF T P+G G     G++    +A   +D++  G E+ +GG R H       A   
Sbjct: 335 MAKRPFYTAPEGYGRAGGAGSEPAPGQASNSFDVLFRGLELTTGGQRLHRPSDYRAALER 394

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G           G   AF  GMPPHGG A G++R V  L GA+NVREV+LFP
Sbjct: 395 AGQDPA----PLAGYLAAFDHGMPPHGGFAIGLERWVARLNGAENVREVALFP 443


>gi|218295720|ref|ZP_03496516.1| aspartyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243879|gb|EED10406.1| aspartyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 422

 Score = 84.0 bits (206), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 33/239 (13%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN------PDSACFEIAKSVRSE 68
           + VG  V L G++H  R  G + FL +RD  G+ QVV        P+S+           
Sbjct: 10  AHVGQEVELMGFLHWRRDLGKVQFLLLRDRSGVVQVVTGGMRLPLPESS----------- 58

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE--REYPESIR 125
             L + GLV+             G +E+ A+++E+LS A E  P+ +  E  R +P+++ 
Sbjct: 59  --LRVRGLVVENPK-------APGGLEVQAKEVEVLSPALEPTPVEIPKEEWRAHPDTL- 108

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            +YR++ LR +     +  +  ++   R  +  ++F E  TP +  +  EG         
Sbjct: 109 LEYRYVTLRGEKARAPLKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGAEGGSGLFGVDY 168

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             + ++ A  Q+PQ YKQ+ M   F+R +++AP +R E+  + R   E+  LD+EM F+
Sbjct: 169 FEKRAYLA--QSPQLYKQI-MVGVFERVYEVAPVWRMEEHNTSRHLNEYLSLDVEMGFI 224



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SGG R H    +L +    G+  E     F G    F+ GMPPHGG A 
Sbjct: 337 FDLLFRGLEITSGGQRIHRYGDLLASLEAKGMDPEG----FRGYLEVFKYGMPPHGGFAI 392

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+   LLG  NVR    FP  ++
Sbjct: 393 GAERLTQKLLGLPNVRYARAFPRDRH 418


>gi|328850413|gb|EGF99578.1| hypothetical protein MELLADRAFT_40205 [Melampsora larici-populina
           98AG31]
          Length = 533

 Score = 84.0 bits (206), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 22/257 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSACFEIAK---SVRSEWV 70
           VG  VRL   VH  R     + FL +R      Q +  A PD+   ++ K    +  E +
Sbjct: 81  VGQRVRLQARVHNSRSQSAKLCFLVLRQQISTIQAILSATPDTISKQMVKFTTGISLESI 140

Query: 71  LCIDGLVMS-----RSAETINANIITGQIELSAQK-IEILSVAEELPLPVFGEREYPESI 124
           + ++G++       +     NA I   ++ L A+  I++    E+    V  E E   ++
Sbjct: 141 VIVEGVIQKPIEGVKGCSISNAEIKLDKVYLVAEAPIKLPFSLEDASRSVDAEGEQFVTV 200

Query: 125 ----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   R LDLR    +     ++R+ N  R  +  + F+E  TP +  ++ E     
Sbjct: 201 GSDTRLDNRVLDLRTPVNNAIFKVQSRVCNLFRAYLDGQGFMEIHTPKIQGAATESGASV 260

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 +Q +F A  Q+PQ  KQ+ +A+ FDR ++IAP FR E+  + R   EF  LD+E
Sbjct: 261 FKLQYFDQPAFLA--QSPQLAKQMAIAADFDRVYEIAPVFRAENSNTYRHMTEFTGLDLE 318

Query: 241 MS----FVEQDDILNTM 253
           MS    + E  D+L+ M
Sbjct: 319 MSLQEHYHEAVDLLDAM 335



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H    +++   NVGI+ + ++    G    F+ G PPH G   
Sbjct: 448 YDFFMRGEEIISGAQRIHEPNFLIERMKNVGINPDDMK----GYVDGFKLGCPPHAGGGV 503

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML  G  N+R+ S+FP
Sbjct: 504 GLERVVMLFCGLGNIRKASMFP 525


>gi|227878662|ref|ZP_03996577.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256850385|ref|ZP_05555813.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|312977490|ref|ZP_07789238.1| asparagine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|227861726|gb|EEJ69330.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256712782|gb|EEU27775.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|310895921|gb|EFQ44987.1| asparagine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 432

 Score = 84.0 bits (206), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      F+ AKS+R E    I G V
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFDTAKSLRQEASFYITGTV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    ++++S  E  P+   G +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGVDFLLDHRHLWLRSKK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E FI+   PI   S+PEG          +  ++  L Q+
Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFDHDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++    N                T   NF+R+ YDDAI+
Sbjct: 245 AYMVKQVLENNEYELKILGRDPEKLRPTTEGNFVRLPYDDAIK 287


>gi|291384180|ref|XP_002708714.1| PREDICTED: asparaginyl-tRNA synthetase 2, mitochondrial
           [Oryctolagus cuniculus]
          Length = 477

 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 29/274 (10%)

Query: 5   RTHSCGDLGVSDV-------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPD 55
           R    G L V D        G  V++ GW+  VR    ++FL I D   +   Q+VA+  
Sbjct: 21  RHKPSGRLSVRDALRAQHTSGERVKVQGWIRSVRSQKEVLFLHINDGSSLESLQIVADAS 80

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
             C E+A     E    + G ++   A+  N       +EL A+ I ++   +    P+ 
Sbjct: 81  FDCRELAFGSSVE----VQGQLVKSPAKRQN-------VELKAENITVIGNCDAKAFPIK 129

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
            +  +P     +Y  L  R + L   +  R+    ++        F+   TP++T++  E
Sbjct: 130 YKERHPLEYLRQYPHLRCRTNVLGSILRVRSEATAAIHSFFKDRGFVHIHTPVITSNDCE 189

Query: 176 GARDFL---VPSRVN--QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRS 227
           GA +       S++   +G+F+ +P       QL   +M+  F + F   P FR E+ +S
Sbjct: 190 GAGELFQVEASSKIKAPEGNFFDVPTFLTVSGQLHLEVMSGAFAQVFTFGPTFRAENSQS 249

Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGV 260
            R   EFY ++ E+SF+E   D+   ME++ +  
Sbjct: 250 RRHLAEFYMVEAEISFIENLQDLTQIMEDLFKST 283


>gi|88855926|ref|ZP_01130588.1| aspartyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88814793|gb|EAR24653.1| aspartyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 479

 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 115/248 (46%), Gaps = 27/248 (10%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVV--------ANP--DSACFEIAKSVRSEWVLC 72
           +SGWV  VR    + F+ +RD  G  Q+V          P  D+    I+   +  ++  
Sbjct: 57  VSGWVDTVRDQKKVQFVVLRDESGAVQLVHPRSFNEDGTPAEDALAETISGLAQGTFLTA 116

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
              L      +     I    IEL+ + I    +AE+  +            R  +RFLD
Sbjct: 117 TGELKHDERVKLGGVEIKLDGIELAGEAIAETPIAEDSSV----------DKRMDWRFLD 166

Query: 133 LR--RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  R++L   I  +T + ++ R   +  +FIE  TP L AS+ E   +       +  +
Sbjct: 167 LRVPRNSLIFRI--QTTLEHAWRTYWVENDFIEVHTPKLMASASESNAELFEVEYFDTKA 224

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDI 249
           +  L Q+PQ +KQ+  A+GF + F+IAP FR +   + R   EF  +D E+S+++  +D+
Sbjct: 225 Y--LAQSPQFFKQMAQAAGFGKIFEIAPSFRADPSFTSRHATEFTMVDNEISWIDSHEDV 282

Query: 250 LNTMENVL 257
           +   E ++
Sbjct: 283 MKMHEELM 290



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 4/79 (5%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI++G  R H  +V+       G+    ++         F+ G+PPHGG   
Sbjct: 394 YDLVYNGVEISTGAQREHRVDVLEAQIRAKGMDPAELDFYLD----FFRYGVPPHGGFGM 449

Query: 542 GIDRIVMLLLGAKNVREVS 560
           G+ R++ML+LG  N+RE +
Sbjct: 450 GLGRVLMLMLGLPNLREAT 468


>gi|295693031|ref|YP_003601641.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295031137|emb|CBL50616.1| Asparaginyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 432

 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      F+ AKS+R E    I G V
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFDTAKSLRQEASFYITGTV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    ++++S  E  P+   G +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGVDFLLDHRHLWLRSKK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E FI+   PI   S+PEG          +  ++  L Q+
Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFDHDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++    N                T   NF+R+ YDDAI+
Sbjct: 245 AYMVKQVLENNEYELKILGRDPEKLRPTTEGNFVRLPYDDAIK 287


>gi|325956896|ref|YP_004292308.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333461|gb|ADZ07369.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 432

 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 116/283 (40%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      FE AK++R E    I G V
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFETAKTLRQEASFYITGTV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    ++++S  E  P+   G +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGVDFLLDHRHLWLRSKK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E FI+   PI   S+PEG          +  ++  L Q+
Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFDHDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDLQERYL 244

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++  + N                T   NF R+ YDDA++
Sbjct: 245 AYMIKQVLDKNEYELKILGRDPEKLRPTTEGNFTRLPYDDAVK 287


>gi|156095123|ref|XP_001613597.1| aspartate-tRNA ligase [Plasmodium vivax SaI-1]
 gi|148802471|gb|EDL43870.1| aspartate-tRNA ligase, putative [Plasmodium vivax]
          Length = 631

 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 24/273 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-----PDSACFEIAKSVRS 67
           G   + S + + G +H +R  G + F+ +R      Q + +      D    +   ++  
Sbjct: 177 GAHLLQSDIWVRGRIHDIRSKGSLAFIILRHKLYSMQCILDIKHNDNDKNMMKWVSNLPL 236

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF----------G 116
           E ++ I G +        + NI   + E   +KI  +S  A+ELP  +           G
Sbjct: 237 ESIVDIKGKLSKPEVPIDSTNI---KYEAHIRKIFCISKTAKELPFLLKDANMKETNEEG 293

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             +  +  R   R +DLR    +     +++I    +  ++  NFIE  TP L   S EG
Sbjct: 294 SIKVNQDNRLNNRCVDLRTYANYSIFCLQSQICTIFKNFLLENNFIEIHTPKLLGESSEG 353

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +    +  NQ  F  L Q+PQ YKQ+ + SGFDR F++AP FR E+  + R   E+  
Sbjct: 354 GANAFQINYFNQKGF--LAQSPQLYKQMCINSGFDRVFEVAPVFRAENSNTYRHLCEYVS 411

Query: 237 LDMEMSFVEQDDILNT--MENVLRGVFEEFSNG 267
           LD+EM++ + D + N    +++ + +F E S G
Sbjct: 412 LDVEMTY-KYDYLENVHFYDSMFKHIFTELSKG 443



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R     ++L+      +      N+      +F     PH G   
Sbjct: 546 YDFFMRGEEILSGSQRISDVNLLLENIKRFNLDA----NKLNFYIDSFAYSSYPHSGCGI 601

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++ML LG  N+R+ SLFP
Sbjct: 602 GLERVLMLFLGLNNIRKTSLFP 623


>gi|326427198|gb|EGD72768.1| aspartyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 535

 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 31/285 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-------YGITQVVANPDSACFEIAK 63
           DL V D  S V + G VH VR  G   FL IR         + +  VV+    A      
Sbjct: 89  DLSVDDATSRVLVRGRVHTVRVTGKQAFLRIRQRTHSLQAIFAVNDVVSK---AMVRFIG 145

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP-LPVFGE----- 117
            +  E ++ ++G++    +   + ++    +EL+  K+ +  V E LP LP+  E     
Sbjct: 146 KLNPESIIDVEGILNKAPSPVESCSM--KDLELAGDKLFV--VCEALPRLPLQIEDATRA 201

Query: 118 ---REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
               +YP +  R   R LDLR +        ++ +    R  ++ E F E  +P +  ++
Sbjct: 202 EDDTQYPNQDTRLDNRVLDLRAEPNQAIFKMQSGVCRLFRDFLLKEGFTEIHSPKIIGTA 261

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            E              +F A  Q+PQ YKQ+ +A+   + F+I P FR ED  + R   E
Sbjct: 262 SESGSSVFKLQYFKTQAFLA--QSPQLYKQMCIAADMGKVFEIGPVFRAEDSNTHRHLTE 319

Query: 234 FYQLDMEMSFVEQ-DDILNTME----NVLRGVFEEFSNGNTVSNN 273
           F  LDMEM+F E   ++L  ++    ++ RG+ E+F+    + N 
Sbjct: 320 FTGLDMEMAFNEHYHEVLEVLDRLFISIFRGLSEQFAEEVEMVNK 364



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD++  G EI SG  R H  +++ +     G+S E +    G    AF+ G  PHGG   
Sbjct: 450 YDIMMRGEEIMSGAQRVHDPKLLEERALAHGLSLEEI----GPYVDAFRYGCSPHGGGGV 505

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ SLFP
Sbjct: 506 GLERVVMLFLGLPNIRKTSLFP 527


>gi|138895750|ref|YP_001126203.1| asparaginyl-tRNA synthetase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196248632|ref|ZP_03147332.1| asparaginyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|166231665|sp|A4IQ54|SYN_GEOTN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|134267263|gb|ABO67458.1| Asparaginyl-tRNA synthetase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196211508|gb|EDY06267.1| asparaginyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 430

 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 118/286 (41%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q V   AN     F+ AK++  E  L +
Sbjct: 12  VGQEVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVEKANVSEEVFQRAKTLTQETSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V                 ELS   I++++ A + P+     +E+       +R L L
Sbjct: 72  TGTVRVDERSPFG-------YELSVTNIQVINEAVDYPI---TPKEHGVEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  +I +         F++   PILT S+PEG  +       ++ ++  
Sbjct: 122 RSRRQHAIMKIRNELIRATYEFFNERGFVKVDAPILTGSAPEGTTELFHTKYFDEDAY-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F E +D L   
Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYEFEDNLRLQ 238

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284
           E  +  + +               + +    V   F R+ YD+AI+
Sbjct: 239 EEYVSYLVQSVLSRCQLELGRLGRDVTKLELVKPPFPRLTYDEAIK 284


>gi|256089852|ref|XP_002580965.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238666694|emb|CAZ37204.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 159

 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 5/157 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y++H+CG+L    + S V + GW+   R      FL +RD  G+ Q+  + +S   +I +
Sbjct: 8   YKSHACGELSTQHINSTVTVCGWLEFCRLSSR--FLVLRDDRGLIQIYCDKNS--LKIPQ 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
              SE VL + G V +R  + +N  + TG+IE+ A+ IEILS +  L           E 
Sbjct: 64  -FNSESVLRVTGKVQARPEKDVNKRMPTGEIEIVAESIEILSHSSPLSFLPKDAANVNEM 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN 160
            R KYR++DLR   + +NI  R+ II  MR  +   N
Sbjct: 123 ERLKYRYIDLRSSNMQRNIRFRSSIILQMRSFLCQNN 159


>gi|256843258|ref|ZP_05548746.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|293380922|ref|ZP_06626956.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|256614678|gb|EEU19879.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|290922497|gb|EFD99465.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 432

 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      F+ AKS+R E    I G V
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFDAAKSLRQEASFYITGTV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    ++++S  E  P+   G +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGVDFLLDHRHLWLRSKK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E FI+   PI   S+PEG          +  ++  L Q+
Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFDHDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++    N                T   NF+R+ YDDAI+
Sbjct: 245 AYMVKQVLENNEYELKILGRDPEKLRPTTEGNFVRLPYDDAIK 287


>gi|299538659|ref|ZP_07051942.1| asparaginyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298726246|gb|EFI66838.1| asparaginyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 431

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 116/286 (40%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73
           +G  V++  W+   R  G I FL +RD  G  Q V   +      F  AK +  E  + +
Sbjct: 13  IGETVKIGAWLANKRSSGKIAFLQLRDGSGFVQGVVVKEEVGEEIFATAKGMTQETSMYV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V +    +          EL+   IE+L  A + P+     +E+        R L L
Sbjct: 73  IGEVKADERSSFGC-------ELAITGIEVLHAATDFPIT---PKEHGPEFLMDNRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +         F +   PILT S+PEG  +       ++ ++  
Sbjct: 123 RSRKQHAIMKIRNEIIRATYEFFNNNGFTKMDPPILTGSAPEGTSELFHTKYFDEDAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L   
Sbjct: 181 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEFEENLEVQ 239

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284
           E  +  + +               + S    +   F RI YDDAI+
Sbjct: 240 EQYVAHIVQSVLANCKLDLERLGRDTSTLENIKAPFPRISYDDAIK 285


>gi|666876|gb|AAB41345.1| aspS [Chlamydophila caviae]
          Length = 99

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/87 (41%), Positives = 58/87 (66%)

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +++FS + +S E ++ +FG    A   G PPH GIA G+DRI+M+L GA+ +REV  FP 
Sbjct: 11  IKSFSILELSPESIKEKFGFFIDALSFGTPPHLGIALGLDRIMMVLTGAEGIREVIAFPK 70

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +Q   DL+M +P+ +   QL+EL +++
Sbjct: 71  TQKAADLMMNAPAEIMTSQLKELNIKV 97


>gi|260583582|ref|ZP_05851330.1| asparagine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158208|gb|EEW93276.1| asparagine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 438

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 123/305 (40%), Gaps = 42/305 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SA 57
           M + R +   D     VG  V +  WV   R  G I FL +RD     Q +V   D    
Sbjct: 1   MKKIRMNQAKDY----VGQTVLIGAWVANKRSSGKIAFLQLRDGATYFQGIVVKSDVPEE 56

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            FEIAKS+  E  + + G+V   +   +         EL    +E++  + E P+     
Sbjct: 57  VFEIAKSLTQETAVYVTGVVQEDTRSRLG-------YELLVTGLEVIGESHEYPIT---P 106

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           +E+       +R L LR    H  +  R  II +         FI+  +PIL+ ++ E  
Sbjct: 107 KEHGTDFLMDHRHLWLRSSKQHAIMQIRNAIIYASYEFFDQNGFIKFDSPILSGNAAENT 166

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEF 234
            +        +  ++  P    Q  QL + +G   F   F   P FR E  ++ R   EF
Sbjct: 167 TELF------ETDYFGDPAFLSQSGQLYLEAGAMAFGPVFDFGPVFRAEKSKTRRHLTEF 220

Query: 235 YQLDMEMSFVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRIC 278
           + +D E  FV  D+ L+  E     +++GV +   +               VS  F RI 
Sbjct: 221 WMMDAEYPFVTHDESLDLQEAYVKALIQGVLDRSPHALETLERDVELLKKYVSEPFKRIS 280

Query: 279 YDDAI 283
           YD+AI
Sbjct: 281 YDEAI 285


>gi|295703515|ref|YP_003596590.1| asparaginyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294801174|gb|ADF38240.1| asparaginyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 430

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 117/286 (40%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A  +   F++AKS+  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGSGFMQGVVVKAEVEEETFKLAKSMTQESSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V                 EL+   +E++  A + P+     +E+        R L L
Sbjct: 72  TGIVREDERSPFG-------YELTVTSLEVIHEAVDYPI---TPKEHGTEFLMDNRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +         F +   PILT S+PEG  +       ++ ++  
Sbjct: 122 RSKRQHAVMKVRNEIIRATYEFFNENGFTKVDPPILTGSAPEGTTELFHTKYFDEDAY-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F + +D L   
Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYQFEDNLKVQ 238

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284
           E  +  V +               + S    +   F RI YDDA++
Sbjct: 239 EEYVSHVVQSVLTNCKLELNVLGRDTSKLEQIKAPFPRISYDDALK 284


>gi|300361733|ref|ZP_07057910.1| asparagine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354352|gb|EFJ70223.1| asparagine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 432

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 113/283 (39%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      FE AKS+R E    I G V
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFEAAKSLRQEASFYITGTV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                            E+    ++I+S  E  P+   G +E+        R L LR   
Sbjct: 78  HEDKRSHFG-------YEIQISDLKIVSNNEGYPI---GNKEHGVDFLLDNRHLWLRSKR 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E FI+   PI   S+PEG          N  ++  L Q+
Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNNDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++    N                T   NF R+ YDDAI+
Sbjct: 245 AYMVKQVLENNEYELRILGRDPEKLRPTTEGNFTRLPYDDAIK 287


>gi|290559652|gb|EFD92979.1| asparaginyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 428

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 133/296 (44%), Gaps = 38/296 (12%)

Query: 11  DLGVSDV------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           D+ + D+      G  V ++G+V+ +R      FL +RD  G+ Q V++     FE   +
Sbjct: 2   DMDIKDIKSDKFNGKNVTINGFVNSIRKGKNNTFLMLRDPSGLIQCVSHSFEKDFETVNN 61

Query: 65  VRSEWVLCIDGLVMS-RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +  E  + + G+V     AE        G  EL   ++++ S+AE  PL    ++ + + 
Sbjct: 62  ITRESAIEVSGVVKKDERAE--------GGYELQISELKVYSIAEPYPL----KKGHKKV 109

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
             F  R L +R       +  R+ + +S+     + NF E  +P     S EG       
Sbjct: 110 FLFDNRHLWIRSPKTTAIMKIRSTVFSSIHEFFSSMNFYEIQSPSFVGGSVEGGATLFET 169

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              N+ ++  L Q+ Q Y + ++ S + + + +AP FR E  R+ R   EF+  + E++F
Sbjct: 170 QYFNRKAY--LTQSWQLYAEAMVDSLW-KIYTVAPSFRAEKSRTWRHLTEFWHAEAEVAF 226

Query: 244 VEQDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAI 283
              DD+++  E +++ V +   +                 NTVS  FLR+ Y++ I
Sbjct: 227 KTNDDVMDLEEKLIKFVIKNVLSKNEDDLKVINRDTKILENTVSKPFLRMKYEEVI 282


>gi|290558908|gb|EFD92297.1| asparaginyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 428

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 133/296 (44%), Gaps = 38/296 (12%)

Query: 11  DLGVSDV------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           D+ + D+      G  V ++G+V+ +R      FL +RD  G+ Q V++     FE   +
Sbjct: 2   DMDIKDIKSDKFNGKNVTINGFVNSIRKGKNNTFLMLRDPSGLIQCVSHSFEKDFETVNN 61

Query: 65  VRSEWVLCIDGLVMS-RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +  E  + + G+V     AE        G  EL   ++++ S+AE  PL    ++ + + 
Sbjct: 62  ITRESAIEVSGVVKKDERAE--------GGYELQISELKVYSIAEPYPL----KKGHKKV 109

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
             F  R L +R       +  R+ + +S+     + NF E  +P     S EG       
Sbjct: 110 FLFDNRHLWIRSPKTTAIMKIRSTVFSSIHEFFSSMNFYEIQSPSFVGGSVEGGATLFET 169

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              N+ ++  L Q+ Q Y + ++ S + + + +AP FR E  R+ R   EF+  + E++F
Sbjct: 170 QYFNRKAY--LTQSWQLYAEAMVDSLW-KIYTVAPSFRAEKSRTWRHLTEFWHAEAEVAF 226

Query: 244 VEQDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAI 283
              DD+++  E +++ V +   +                 NTVS  FLR+ Y++ I
Sbjct: 227 KTNDDVMDLEEKLIKFVIKNVLSKNEDDLKVINRDTKILENTVSKPFLRMKYEEVI 282


>gi|322498851|emb|CBZ33924.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 648

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 9/267 (3%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SCG+ G    G  V +   + R R  G + FL +R     +           + A+S+  
Sbjct: 131 SCGESGCVREGDEVTVRARLERTRGRGRLAFLHLRQPPLESVQAVCEGKELTKQARSITP 190

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRF 126
           E ++ + G+V  R A+T   +      EL    + ++S  A  LP P + +       R 
Sbjct: 191 ESIVDVTGVV--RRADTPVQSTTCRGWELQVTALHVVSQAAAPLPFP-YHDINAKLDTRL 247

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            +R +DLR + +       + +  S R  ++A +FIE  TP L  ++ EG  +       
Sbjct: 248 NHRVMDLRTEKMIATSRLVSALGQSFRNELLARDFIEVHTPKLLGAASEGGSNVFRVDYF 307

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE- 245
            + ++ A  Q+PQ YKQ+++     R F++ P FR E+  + R   EF  LD EM   + 
Sbjct: 308 ERKAYLA--QSPQLYKQMMVMGDAMRVFEVGPVFRAENSLTHRHLTEFVGLDGEMVVKDS 365

Query: 246 QDDILNTMENVLRGVFEEFS--NGNTV 270
             ++L+ +E V+  V    +  +GN +
Sbjct: 366 HTEVLDVLEPVMCAVLAHLTQQHGNLI 392



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E++ Q  S   + K  V++       +F+ G  PHGG   
Sbjct: 563 YDMYLRGEEICSGAQRVHQIELLEQRLSAKKVDKVSVKD----YVDSFRYGAWPHGGFGL 618

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RI +  LG  ++R+VSLFP
Sbjct: 619 GLERIALFFLGLDDIRQVSLFP 640


>gi|149642573|ref|NP_001092337.1| probable asparaginyl-tRNA synthetase, mitochondrial [Bos taurus]
 gi|148743934|gb|AAI42046.1| NARS2 protein [Bos taurus]
          Length = 477

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 134/307 (43%), Gaps = 44/307 (14%)

Query: 10  GDLGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVR 66
           G LGV    G  V++ GW+  +R    ++FL + D   +   QVVA+      E+A    
Sbjct: 32  GALGVQSANGERVKVQGWIRSIRSQKEVLFLHVNDGSSLESLQVVADSSFDSRELAFGSS 91

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E    + G ++   ++  N       +EL A+KIE++   +    P   +  +P     
Sbjct: 92  VE----VQGQLVKSPSKKQN-------VELKAEKIEVVGSCDAKAFPFKYKERHPLEYLR 140

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS 184
           +Y  L  R + L   +  R+    ++        F+   TP++T++  EGA +   + PS
Sbjct: 141 QYPHLRCRTNVLGSVLRVRSEATAAIHSFFKDSGFVHIHTPVITSNDCEGAGELFQVEPS 200

Query: 185 ---RVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
              +V + +F+ +P       QL   +M+  F + F   P FR E+ +S R   EFY ++
Sbjct: 201 SKIKVPEENFFNIPVFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVE 260

Query: 239 MEMSFVEQ-DDILNTMENVLRGV-FEEFSN--------------------GNTVSNNFLR 276
            E+SF+E   D++  ME++ +       SN                     + + NNFL 
Sbjct: 261 AEISFLESLQDLMQVMESLFKTTAMTVLSNCPKDVELCHKFLAPGQKDRLEHMLKNNFLI 320

Query: 277 ICYDDAI 283
           I Y +A+
Sbjct: 321 ISYTEAV 327



 Score = 37.4 bits (85), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 14/94 (14%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHG 537
           DL+  G  E+  G +R     ++ Q  + +G+++     +   RFG +         PHG
Sbjct: 393 DLLVPGVGELFGGSLREERYHLLEQRLARLGLTEAYQWYLDLRRFGSV---------PHG 443

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   G +R +  +LG  N+++V  FP   + C L
Sbjct: 444 GFGMGFERYLQCILGIDNIKDVIPFPRFTHSCLL 477


>gi|150020425|ref|YP_001305779.1| asparaginyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149792946|gb|ABR30394.1| asparaginyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 431

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 128/289 (44%), Gaps = 35/289 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           VG  V L GWV R R  G I F+++RD  GI QVV   ++ D   F+  + +R E  L +
Sbjct: 12  VGKEVELRGWVWRSRSSGKIAFINMRDGTGIVQVVVEASSVDEETFKNTRKLRMESSLIV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLD 132
            G+V              G +E+ A  +  + + +E+ P+    + ++       +R L 
Sbjct: 72  KGIVKEEQR-------APGGVEIHATHVTPVQIPSEDFPI---NKPDHSIEYLMDHRHLW 121

Query: 133 LR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           LR R  +H   ++ T ++ ++R       FI+  TPI T +  E A +       + G  
Sbjct: 122 LRSRRQMHILNIRDT-VLKAIRKFYWENGFIQVDTPIFTGAIGESAGNLFKIDYFDYGKV 180

Query: 192 YALPQAPQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           Y L Q  Q Y +   MA G  + F + P FR E  ++ R   EF+  + E+++ E +D L
Sbjct: 181 Y-LAQTGQLYLEAACMALG--KVFNLGPTFRAEKSKTRRHLIEFWMNEAEVAYYEHEDNL 237

Query: 251 NTMENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284
              EN+               L  +  + S    +   F RI Y +A++
Sbjct: 238 KLQENLVSYIIKYILENASEHLHALNRDTSKLEKIEPPFPRITYTEAVK 286


>gi|296242442|ref|YP_003649929.1| aspartyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296095026|gb|ADG90977.1| aspartyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 420

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 17/244 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCIDGL 76
           ++R+ GWV R +  G ++ +++        V+      +   + ++K++     LC +G 
Sbjct: 4   YMRVCGWVLRKKEIGKVVIIEVTGSRSKPYVLVFKEEREPQLYAVSKTLDVGTALCFEGE 63

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDLRR 135
           V +              IE +  KIEI S  A  LP+ V G+       R KYR+L LR 
Sbjct: 64  VATEQKSRRG-------IEYTVSKIEIYSKPASPLPVEVSGKVPSLLDTRIKYRWLLLRN 116

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA-L 194
                    R  + ++ R  +    F E  TP + A+  EG        +V    + A L
Sbjct: 117 PAEKAIFNIRESVFHAAREYLRRNGFHEVQTPKIVAAGAEGGATLF---KVEYFEYQAYL 173

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTM 253
            Q+PQ YKQ+LM + + R ++I P FR E   + R   E + +D+E  F+   +D+L T+
Sbjct: 174 SQSPQLYKQILM-NAYPRVYEITPYFRAEKFNTPRHLNESWGIDVEQGFINGVEDVLETL 232

Query: 254 ENVL 257
           EN++
Sbjct: 233 ENLV 236



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 27/154 (17%)

Query: 410 CSFAADARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
            S   D  +H  ++LG I+        +I  FP   WN        A   + M + G  +
Sbjct: 284 VSEKEDLPDHAEKKLGEIMKSKGHRLYFITGFP---WN--------ATGFYYMREDGSYT 332

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
            K           +DL   G EIASGG R H  + +++A    G++ E     F     +
Sbjct: 333 RK-----------FDLDYEGLEIASGGQREHRYDKLVEALILKGLNPE----SFQFYLES 377

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           F+ G+PPHGG   G++R++M +L  +NVRE  LF
Sbjct: 378 FKYGIPPHGGFGLGVERLLMKMLNLENVREAILF 411


>gi|159110974|ref|XP_001705722.1| Aspartyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157433811|gb|EDO78048.1| Aspartyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 555

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 126/294 (42%), Gaps = 33/294 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-------------ANPDSACFEIAK 63
           VG  V +   +H VR  G   FL +R    I Q                +   A  +   
Sbjct: 94  VGHKVWVRARIHTVRATGKSAFLMLRGKMAILQACCFVPGKSEGSAEKVDEYRAMIKYIN 153

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122
           S+  E V+ + G + S  A    A+      EL  +KI  +S  A ++PL V  +   P+
Sbjct: 154 SLPPESVVEVCGALSSVDAPIKTASAEHRDYELQLEKIYAISRAASQMPLQV-DDAMRPD 212

Query: 123 SI---------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
           S+               +  YR +DLR  T    +  R+ I +  R  +    FIE +TP
Sbjct: 213 SVYQAPDSQYVRPGKDTKQDYRVIDLRTPTNQAIMRVRSAIAHEFRSFLDKAGFIEINTP 272

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            + A + EG       +  N  +   L Q+PQ YKQ+ ++SGF R +++ P FR E   +
Sbjct: 273 KIVAGTSEGGAAVFNVNYFNTKA--CLAQSPQLYKQMCISSGFGRVYEVGPVFRAEHSHT 330

Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
            R   EF  LD+EM   E   +IL  + ++++ +F+      +   + +R  YD
Sbjct: 331 HRHLCEFIGLDLEMEIYESYTEILVLLGDLMKHIFKAVEARCSKEMSIVRTQYD 384



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E++ +      +  E + +       AF+ G  PHGG   
Sbjct: 470 YDMFIRGEEICSGAQRVHDPELLEKQCRERNVDPESLRSYID----AFRYGCAPHGGAGL 525

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G++RIVML+LG +N R+  LFP +Q 
Sbjct: 526 GLERIVMLMLGIENCRQTCLFPRTQE 551


>gi|227494365|ref|ZP_03924681.1| lysyl-tRNA synthetase [Actinomyces coleocanis DSM 15436]
 gi|226832099|gb|EEH64482.1| lysyl-tRNA synthetase [Actinomyces coleocanis DSM 15436]
          Length = 1084

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 117/241 (48%), Gaps = 10/241 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R    G++  +  G+ VR +G V   R HGG+IFLD++D  G  Q++A+      +  + 
Sbjct: 627 RDQRVGEVISASPGTSVRCAGRVVARRDHGGVIFLDVQDWTGTVQLLASAAQVGADTMRI 686

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R +  L I   +    A   +AN   G   +  +  +I S A + P+P   +    E +
Sbjct: 687 LRRD--LSIGDHLGFWGAVGTSAN---GTFSVLLEGAQITSKALQ-PIPALWQGLTDEQM 740

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV 182
           + + R+LDL  + + +  V+ R+++I S+R  ++ + F+E  TP+L T      AR F  
Sbjct: 741 KVRRRYLDLIVNPVARERVRVRSQVIQSIRQTLLDDTFLEVETPLLQTIHGGANARPFRT 800

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y L  AP+ Y + LM  G DR F+I   FR+E   +   P EF  L+   +
Sbjct: 801 YINAYNLDLY-LRIAPELYLKRLMVGGADRVFEIGRNFRNEGADATHNP-EFTMLEAYQA 858

Query: 243 F 243
           +
Sbjct: 859 Y 859



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 13/94 (13%)

Query: 479  AFQYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DL+C G E+A+           R  +    L A +    + EV E+       A +
Sbjct: 990  AEKWDLICFGAEVATAYSELVDPVVQRERLLAQSLLAANGDPEAMEVDED----FLLALE 1045

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              MPP GG+  G+DR+VM+L    ++RE  +FP+
Sbjct: 1046 YAMPPSGGMGMGVDRLVMMLT-QTSIRETIIFPL 1078


>gi|184155665|ref|YP_001844005.1| asparaginyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|183227009|dbj|BAG27525.1| asparaginyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 431

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 124/286 (43%), Gaps = 32/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73
           V   VR+  W+   R  G I FL +RD     Q V      D   FEIA+ +R E  L +
Sbjct: 13  VNERVRIGVWLTDKRSSGKIAFLQLRDGTAFFQGVLLKNKVDEETFEIARHLRQEVSLWV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +       I   QIE    ++E++  ++E P+   G +E+       +R L L
Sbjct: 73  TGEIHEDTRSKFGYEI---QIE----ELELIGDSDEYPI---GNKEHGIDFLLDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R R+I +         F +   PILT ++PEG  D       +Q ++  
Sbjct: 123 RSSKPQAMMRIRDRVIRANYEFFGEHGFTKIDPPILTGNAPEGTTDLFHTEYFDQDAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y++   A   +R +   P FR E  ++ R   EF+ ++ EM+F+ Q++ L   
Sbjct: 181 LSQSGQLYEEA-GAMALNRVYSFGPVFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLELQ 239

Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283
           E     +++ V ++ S    V               + RI YD+AI
Sbjct: 240 EQYVAYLIQKVIDDCSRELEVLGRDPETLKPFTQLPYPRISYDEAI 285


>gi|262046467|ref|ZP_06019429.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|260573338|gb|EEX29896.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 343

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      F+ AKS+R E    I G V
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFDTAKSLRQEASFYITGTV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    ++++S  E  P+   G +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGVDFLLDHRHLWLRSKK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E FI+   PI   S+PEG          +  ++  L Q+
Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFDHDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++    N                T   NF+R+ YDDAI+
Sbjct: 245 AYMVKQVLENNEYELKILGRDPEKLRPTTEGNFVRLPYDDAIK 287


>gi|296471913|gb|DAA14028.1| asparaginyl-tRNA synthetase 2, mitochondrial [Bos taurus]
          Length = 414

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 134/307 (43%), Gaps = 44/307 (14%)

Query: 10  GDLGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVR 66
           G LGV    G  V++ GW+  +R    ++FL + D   +   QVVA+      E+A    
Sbjct: 32  GALGVQSANGERVKVQGWIRSIRSQKEVLFLHVNDGSSLESLQVVADSSFDSRELAFGSS 91

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E    + G ++   ++  N       +EL A+KIE++   +    P   +  +P     
Sbjct: 92  VE----VQGQLVKSPSKKQN-------VELKAEKIEVVGSCDAKAFPFKYKERHPLEYLR 140

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS 184
           +Y  L  R + L   +  R+    ++        F+   TP++T++  EGA +   + PS
Sbjct: 141 QYPHLRCRTNVLGSVLRVRSEATAAIHSFFKDSGFVHIHTPVITSNDCEGAGELFQVEPS 200

Query: 185 ---RVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
              +V + +F+ +P       QL   +M+  F + F   P FR E+ +S R   EFY ++
Sbjct: 201 SKIKVPEENFFNIPVFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVE 260

Query: 239 MEMSFVEQ-DDILNTMENVLRGV-FEEFSN--------------------GNTVSNNFLR 276
            E+SF+E   D++  ME++ +       SN                     + + NNFL 
Sbjct: 261 AEISFLESLQDLMQVMESLFKTTAMTVLSNCPKDVELCHKFLAPGQKDRLEHMLKNNFLI 320

Query: 277 ICYDDAI 283
           I Y +A+
Sbjct: 321 ISYTEAV 327


>gi|313884140|ref|ZP_07817906.1| asparagine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620587|gb|EFR32010.1| asparagine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 432

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 105/249 (42%), Gaps = 20/249 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V ++ WV   R  G I FL +RD     Q V   +      FE  K +  E  L + G V
Sbjct: 17  VVVNAWVTNKRSSGKIAFLQLRDGSAYFQAVILKNQVAPELFEQVKHIGQESSLKLRGTV 76

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +     +         EL     EI+  +E+ P+     +E+       +R L LR   
Sbjct: 77  QASDRSALG-------YELLVSDFEIIGHSEDYPI---TPKEHGTDFLMDHRHLWLRSSR 126

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  II +    M    FI+   PILT S+PEG  +        + ++  L Q+
Sbjct: 127 QHAIMQIRNEIIRATYQFMAENEFIKVDPPILTGSAPEGTTELFHTKYFEEDAY--LSQS 184

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN-- 255
            Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L   E   
Sbjct: 185 GQLYMEA-AAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMMEPEMAFVEHEESLQVQEKYV 243

Query: 256 --VLRGVFE 262
             ++R V E
Sbjct: 244 AYLVRNVIE 252


>gi|170060018|ref|XP_001865617.1| aspartyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167878624|gb|EDS42007.1| aspartyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 524

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 24/272 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSAC----FEIAKSV 65
           DL   +  + V + G VH  R  G   FL +R      Q VVA  D A      + + SV
Sbjct: 71  DLSGCEKDALVWVRGRVHTTRSKGKQCFLVLRQQSSTVQCVVAVNDKAVSKQMVKFSGSV 130

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFG-----ERE 119
             E ++ +   V+  +A+       T  +EL A +  ++S A+ +LPL +       + +
Sbjct: 131 PRESIVDVRARVVPVAAKIEACTEQT--LELHATEFYLVSAAKAQLPLQIEDAARPEKSD 188

Query: 120 YPESIRFKY--------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
            PE+++ +         R LDLR             +    R  + A+ F E  TP + +
Sbjct: 189 DPEALKIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDILAAQGFTEIHTPKIIS 248

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +    S     ++  L Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R  
Sbjct: 249 AASEGGANVFTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHL 306

Query: 232 GEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262
            EF  LD+EM+F     ++L+T+ N    +F+
Sbjct: 307 TEFVGLDLEMAFKYHYHEVLDTIGNTFTEIFK 338



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++   +  I      ++      AF+ G PPH G   
Sbjct: 439 YDMFMRGEEILSGAQRIHDPEYLVERAKHHAIDT----SKIAAYIEAFRFGCPPHAGGGI 494

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 495 GMERVVMLYLGLDNIRKTSMFP 516


>gi|146094294|ref|XP_001467258.1| aspartyl-trna synthetase [Leishmania infantum JPCM5]
 gi|321399397|emb|CBZ08620.1| putative aspartyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 641

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 9/267 (3%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SCG+ G    G  V +   + R R  G + FL +R     +           + A+S+  
Sbjct: 124 SCGESGCVREGDEVTVRARLERTRGRGRLAFLHLRQPPLESVQAVCEGKELTKQARSITP 183

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRF 126
           E ++ + G+V  R A+T   +      EL    + ++S  A  LP P + +       R 
Sbjct: 184 ESIVDVTGVV--RRADTPVQSTTCRGWELQVTALHVVSQAAAPLPFP-YHDINAKLDTRL 240

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            +R +DLR + +       + +  S R  ++A +FIE  TP L  ++ EG  +       
Sbjct: 241 NHRVMDLRTEKMIATSRLVSALGQSFRNELLARDFIEVHTPKLLGAASEGGSNVFRVDYF 300

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE- 245
            + ++ A  Q+PQ YKQ+++     R F++ P FR E+  + R   EF  LD EM   + 
Sbjct: 301 ERKAYLA--QSPQLYKQMMVMGDAMRVFEVGPVFRAENSLTHRHLTEFVGLDGEMVVKDS 358

Query: 246 QDDILNTMENVLRGVFEEFS--NGNTV 270
             ++L+ +E V+  V    +  +GN +
Sbjct: 359 HTEVLDVLEPVMCAVLAHLTQQHGNLI 385



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E++ Q  S   + K  V++       +F+ G  PHGG   
Sbjct: 556 YDMYLRGEEICSGAQRVHQIELLEQRLSAKKVDKVSVKD----YVDSFRYGAWPHGGFGL 611

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RI +  LG  ++R+VSLFP
Sbjct: 612 GLERIALFFLGLDDIRQVSLFP 633


>gi|308501867|ref|XP_003113118.1| CRE-DARS-1 protein [Caenorhabditis remanei]
 gi|308265419|gb|EFP09372.1| CRE-DARS-1 protein [Caenorhabditis remanei]
          Length = 540

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 150/373 (40%), Gaps = 64/373 (17%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVR 66
           ++ VS+    + + G VH +R  G   F+ +R      Q+             +   S+ 
Sbjct: 74  EINVSNATKDIWVRGRVHTIRSKGKNCFIVLRQGVYTVQIAMFMNDKISKQMLKFVSSIS 133

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVF-GEREYPES- 123
            E +  ID        ET   +     +EL AQ++ ++S  A +LPL +    R  P   
Sbjct: 134 KESI--IDVYATINKVETPIESCTQKDVELLAQQVFVVSASAPKLPLQIEDASRRAPTDE 191

Query: 124 ----------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
                            R   R LDLR  T H     +  + N  R  + A  FIE   P
Sbjct: 192 EKAKEQENQLAVVNLDTRLDNRVLDLRTTTSHAIFRIQAGVCNQFRNILDARGFIEIMAP 251

Query: 168 -ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
            I++A S  GA  F V     +GS Y L Q+PQ YKQ+ +A  F++ + I P FR ED  
Sbjct: 252 KIISAPSEGGANVFEV--SYFKGSAY-LAQSPQLYKQMAIAGDFEKVYTIGPVFRAEDSN 308

Query: 227 SDRLPGEFYQLDMEMS--------------FVEQDDILNTMENVLRGVFEEFSN-----G 267
           + R   EF  LD+EM+              F   + I   +  + +G+ E++ +     G
Sbjct: 309 THRHMTEFVGLDLEMAFNFHYHEKLKFYFIFQVMETIAEVLTQMFKGLQEKYQDEIAAVG 368

Query: 268 NTVSNNFLRIC-------YDDAI---RRYGT---DKPDLRNPI--IMHNVTEHFVHSEFR 312
           N       + C       Y DAI   R  G    D+ DL  P+   +  + +    ++F 
Sbjct: 369 NQYPAEPFQFCEKPLILKYPDAIALLRENGIEIGDEDDLSTPVEKFLGKLVKEKYSTDFY 428

Query: 313 VFSKI-LSVNPGY 324
           V  K  L+V P Y
Sbjct: 429 VLDKFPLAVRPFY 441



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H ++++++  ++  +    +++       AF+ G PPH G   
Sbjct: 455 YDMFMRGEEILSGAQRIHDADMLVERATHHQVDLAKIQSYID----AFKYGCPPHAGGGI 510

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  N+R  SLFP
Sbjct: 511 GLERVTMLFLGLHNIRLASLFP 532


>gi|227892517|ref|ZP_04010322.1| asparaginyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227865638|gb|EEJ73059.1| asparaginyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 432

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 115/283 (40%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      FE AKS+R E    I G V
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSDEVFEAAKSLRQEASFYITGTV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    ++++S  E  P+   G +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQITDLKVISNNEGYPI---GNKEHGIDFLLDHRHLWLRSKK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E FI+   PI   S+PEG          +  ++  L Q+
Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFDHDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDLQERYL 244

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++    N                T   NF R+ YDDA++
Sbjct: 245 AYMTKQVLEKNQYELKILGRDPEKLRPTTEGNFTRLPYDDAVK 287


>gi|119873242|ref|YP_931249.1| lysyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119674650|gb|ABL88906.1| lysyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 482

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 130/287 (45%), Gaps = 26/287 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  +R +G V  +R H  ++F+D+ +     QV+A+P  +  +     R +++  ++G+
Sbjct: 54  VGLVIRTAGRVTDIRRHPNVVFIDLYEDGARFQVMADPRHSLLDYI--WRGDYI-GVEGV 110

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++             G   + A  + +L+ A + PLP +G+ +       +YR + +  D
Sbjct: 111 IVKTQ---------RGDYAVRASSLVLLAKAVQ-PLPEWGKVDRDSPFYMRYRSVAMVLD 160

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
             L   I  R + I ++R  M    FIE  TP+L        AR F          +Y L
Sbjct: 161 LQLRWRIAARAKFIQALREAMWKRGFIEIPTPVLQPIYGGAAARPFTTKIWAIDEEWY-L 219

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ Y +  + +GF + F++ P FR+ED  +   P EF+ L+   ++ + +D++   E
Sbjct: 220 RISPELYLKRYIIAGFPKVFEVGPQFRNEDIDALHNP-EFWSLEAYQAYADYNDMMKLTE 278

Query: 255 NVL---------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
            V+          GV +        S  + RI   DA+R YG   PD
Sbjct: 279 EVVYEAVSAVLGTGVVKYRDQTINFSPPWRRITLHDALREYGGVDPD 325



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 26/36 (72%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           GMPP GG+  GIDR+ M++  A+++++V  +P+ + 
Sbjct: 446 GMPPTGGVGIGIDRLAMVITNAESIKDVIPYPIVKR 481


>gi|154337170|ref|XP_001564818.1| aspartyl-trna synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134061856|emb|CAM38893.1| putative aspartyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 644

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 124/265 (46%), Gaps = 8/265 (3%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           SCG+ G    G  V +   + R R  G  + FL +R     +        A  + A+++ 
Sbjct: 124 SCGESGRIREGDTVTVRARLERTRSRGKRLAFLHLRQPPLESVQAVCEGKALTKQARNIT 183

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIR 125
            E ++ + G V+ R+A ++ +    G  EL    ++++S A   LP P + +       R
Sbjct: 184 PESIVDVTG-VLCRAATSVQSTTCQGW-ELQVTALQVVSQATTPLPFP-YHDTNTKLDTR 240

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R +DLR + +       + +  S R  ++A +FIE  TP L  ++ EG  +      
Sbjct: 241 LNHRVMDLRTEQMAATSRLVSALGQSFRNELLALDFIEVHTPKLLGAASEGGSNVFQVDY 300

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ ++ A  Q+PQ +KQ+++     R F++ P FR E   + R   EF  LD EM   +
Sbjct: 301 FDRKAYLA--QSPQLHKQMMLMGDAMRVFEVGPVFRAEKSLTHRHLTEFIGLDGEMVIKD 358

Query: 246 -QDDILNTMENVLRGVFEEFSNGNT 269
              ++L+ +E V+  V  + +  ++
Sbjct: 359 SHTEVLDVLEPVMCAVLAQLAQKHS 383



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E++ Q      ++K V          +F+ G  PHGG   
Sbjct: 559 YDMYLRGEEICSGAQRVHEIELLEQRL----LAKRVDRVGLKDYVDSFRYGAWPHGGFGL 614

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RI +L LG  ++R+VSLFP
Sbjct: 615 GLERIALLFLGLNDIRQVSLFP 636


>gi|227514855|ref|ZP_03944904.1| asparagine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227086787|gb|EEI22099.1| asparagine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 436

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 124/286 (43%), Gaps = 32/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73
           V   VR+  W+   R  G I FL +RD     Q V      D   FE+A+ +R E  L +
Sbjct: 18  VNERVRIGVWLTDKRSSGKIAFLQLRDGTAFFQGVLLKNKVDEETFEMARHLRQEVSLWV 77

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +       I   QIE    ++E++  ++E P+   G +E+       +R L L
Sbjct: 78  TGEIHEDTRSKFGYEI---QIE----ELELIGDSDEYPI---GNKEHGIDFLLDHRHLWL 127

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R R+I +         F +   PILT ++PEG  D       +Q ++  
Sbjct: 128 RSSKPQAMMRIRDRVIRANYEFFGEHGFTKIDPPILTGNAPEGTTDLFHTEYFDQDAY-- 185

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y++   A   +R +   P FR E  ++ R   EF+ ++ EM+F+ Q++ L   
Sbjct: 186 LSQSGQLYEEA-GAMALNRVYSFGPVFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLELQ 244

Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283
           E     +++ V ++ S    V               + RI YD+AI
Sbjct: 245 EQYVAYLIQKVIDDCSRELEVLGRDPETLKPFTQLPYPRISYDEAI 290


>gi|221052406|ref|XP_002257779.1| Aspartate--tRNA ligase [Plasmodium knowlesi strain H]
 gi|193807610|emb|CAQ38115.1| Aspartate--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 628

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 26/262 (9%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVAN-----PDSACFEIAKSVRSEWVLCIDGLVMS 79
           G +H +R  G + F+ +R      Q + +      D    +   ++  E ++ I G +  
Sbjct: 186 GRIHDIRSKGSLAFIILRQKLYSMQCILDIKNNDNDKNMMKWVSNLPLESIVDIYGKLTK 245

Query: 80  RSAETINANIITGQIELSAQKIEILS-VAEELPLPVF----------GEREYPESIRFKY 128
                 + NI   + E+  +KI  +S   +ELP  +           G  +  +  R   
Sbjct: 246 PEVPIDSTNI---KYEVHIKKIFCISKTTKELPFLLKDANMKETNEEGSIKVNQDNRLNN 302

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R +DLR    +     +++I    +  ++  NFIE  TP L   S EG  +    +  NQ
Sbjct: 303 RCIDLRTYANYSIFCLQSQICTLFKNFLLKNNFIEIHTPKLLGESSEGGANAFQINYFNQ 362

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             F  L Q+PQ YKQ+ + SGFDR F++AP FR E+  + R   E+  LD+EM++  + D
Sbjct: 363 KGF--LAQSPQLYKQMCINSGFDRVFEVAPVFRAENSNTYRHLCEYVSLDIEMTY--KYD 418

Query: 249 ILNTM---ENVLRGVFEEFSNG 267
            L  +   +++ + +F E + G
Sbjct: 419 FLENVFFYDSLFKHIFTELTKG 440



 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R     ++L+      +      ++      +F     PH G   
Sbjct: 543 YDFFMRGEEILSGSQRISDVNLLLENIKRFNLDA----SKLNFYIDSFAYSSYPHSGCGI 598

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++ML LG  N+R+ SLFP
Sbjct: 599 GLERVLMLFLGLNNIRKTSLFP 620


>gi|299783376|gb|ADJ41374.1| Asparagine--tRNA ligase [Lactobacillus fermentum CECT 5716]
          Length = 431

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 124/286 (43%), Gaps = 32/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73
           V   VR+  W+   R  G I FL +RD     Q V      D   FE+A+ +R E  L +
Sbjct: 13  VNERVRIGVWLTDKRSSGKIAFLQLRDGTAFFQGVLLKNKVDEETFEMARHLRQEVSLWV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +       I   QIE    ++E++  ++E P+   G +E+       +R L L
Sbjct: 73  TGEIHEDTRSKFGYEI---QIE----ELELIGDSDEYPI---GNKEHGIDFLLDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R R+I +         F +   PILT ++PEG  D       +Q ++  
Sbjct: 123 RSSKPQAMMRIRDRVIRANYEFFGEHGFTKIDPPILTGNAPEGTTDLFHTEYFDQDAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y++   A   +R +   P FR E  ++ R   EF+ ++ EM+F+ Q++ L   
Sbjct: 181 LSQSGQLYEEA-GAMALNRVYSFGPVFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLELQ 239

Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283
           E     +++ V ++ S    V               + RI YD+AI
Sbjct: 240 EQYVAYLIQKVIDDCSRELEVLGRDPETLKPFTQLPYPRISYDEAI 285


>gi|315038481|ref|YP_004032049.1| asparaginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276614|gb|ADQ59254.1| asparaginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|327183675|gb|AEA32122.1| asparaginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 432

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 116/283 (40%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G IIFL +RD     Q V   +      FE AK++R E    I G +
Sbjct: 18  VKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFETAKTLRQEASFYITGTI 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    ++++S  E  P+   G +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQITDLKVVSNNEGYPI---GNKEHGVDFLLDHRHLWLRSKK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  +       E FI+   PI   S+PEG          +  ++  L Q+
Sbjct: 128 PFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVDYFDYDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEA-GAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESLDIQERYL 244

Query: 258 RGVFEEFSNGN----------------TVSNNFLRICYDDAIR 284
             + ++  + N                T   NF R+ YDDA++
Sbjct: 245 AYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFTRLPYDDAVK 287


>gi|307299320|ref|ZP_07579121.1| asparaginyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915116|gb|EFN45502.1| asparaginyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 432

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 121/286 (42%), Gaps = 29/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCI 73
           +   V++ GW+ R R  G I FL +RD  G  Q +    S   + F++A S++ E  L +
Sbjct: 13  INEHVQIRGWLRRKRSSGKIQFLFLRDGSGFVQAIVEKSSVPESVFQVAASLKMESSLIV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            GLV +            G +E+  + +EIL + E+   P+  + ++        R L L
Sbjct: 73  TGLVKAEER-------APGGVEVLVEDVEILQIPEK-DFPI-NKPDHSIDFLMDNRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  II ++R       F+   TPI T S  E A +       + G  Y 
Sbjct: 124 RTQRQTHVLKIRHEIIRAVREFYNDRGFVLVDTPIFTGSIGESAGNTFEIDYFDYGKAY- 182

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +   A    + + + P FR E  ++ R   EF+  + E+++   DD +   
Sbjct: 183 LAQTGQLYLE-AAAMALGKVYNLGPTFRAEKSKTRRHLIEFWMNEAEVAYYGHDDNIKLQ 241

Query: 254 ENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           E++               LR V  + S    +   F RI YD+AI+
Sbjct: 242 EDLVTYVVKKTLERAGEYLRSVGRDTSRLEKIETPFPRITYDEAIK 287


>gi|45187834|ref|NP_984057.1| ADL039Cp [Ashbya gossypii ATCC 10895]
 gi|44982618|gb|AAS51881.1| ADL039Cp [Ashbya gossypii ATCC 10895]
          Length = 556

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 124/281 (44%), Gaps = 31/281 (11%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPDSAC----FEIA 62
            +L   D G  V L   VH VR  G  + FL +R    + Q  V AN +        + A
Sbjct: 97  AELTAEDEGKEVLLRSRVHTVRQQGATLAFLMLRQRSSLIQALVKANAEGTVSKQMVKWA 156

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSA--------QKIEIL--------SV 106
            S+  E ++ + G+V        +A +   +I+++         Q++ IL        + 
Sbjct: 157 GSLNLESIVLVRGVVRKVEEPVKSATVQDFEIQITQLHTISETPQQLPILIEDASRSEAE 216

Query: 107 AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
           AE   LPV          R   R +DLR  T       +  +    R    + NF E  T
Sbjct: 217 AEAAGLPVVNL-----DTRLDARVIDLRTVTNQAIFRIKAGVCGLFREFFQSRNFTEIHT 271

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P L AS  EG  + +   +  +G+ Y L Q+PQ YKQ L+A+ F+R F++AP FR E+  
Sbjct: 272 PKLLASPSEGGAN-VFEVKYFKGNAY-LAQSPQFYKQQLIAADFERVFEVAPVFRAENSN 329

Query: 227 SDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
           + R   EF  +D+EM+F E   +++  M  +   VF E   
Sbjct: 330 THRHMTEFTGVDLEMAFEEHYHEVIEVMGEMFMFVFTELKK 370



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H  E++ +   + G+  E  +  F     AF  G PPH G   
Sbjct: 469 YDFFMRGEEIMSGAQRIHDPELLRERMKHHGLQPE--DAGFKDYCDAFTYGCPPHAGGGI 526

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIVM  L  KN+R  +LFP
Sbjct: 527 GLERIVMFYLDLKNIRRATLFP 548


>gi|149719602|ref|XP_001492609.1| PREDICTED: similar to MGC152259 protein [Equus caballus]
          Length = 477

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V++ GW+  VR    ++FL I D   +   QVVA+      E+A     E    + G
Sbjct: 41  GERVKVQGWIRSVRSQKEVLFLHINDGSSLESLQVVADSSFDSKELAFGSSVE----VQG 96

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++   ++  N       +EL A+KIE++   +    P   +  +P     +Y  L  R 
Sbjct: 97  QLVKSPSKRQN-------VELKAEKIEVVGNCDAKAFPFKYKERHPLEYLRQYPHLRCRT 149

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVNQGS 190
           + L   +  R+    ++        F+   TPI+T++  EGA +   + PS   +V + +
Sbjct: 150 NVLGSILRVRSEATAAIHSFFKDSGFVHIHTPIITSNDCEGAGELFRVEPSSKVKVPEEN 209

Query: 191 FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ- 246
           F+ +P       QL   +M+  F + F   P FR E+ +S R   EFY ++ E+SFVE  
Sbjct: 210 FFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEISFVESL 269

Query: 247 DDILNTMENVLR 258
            D++  ME + +
Sbjct: 270 QDLMQVMERLFK 281


>gi|57640694|ref|YP_183172.1| asparaginyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|73919760|sp|Q5JHC1|SYN_PYRKO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|57159018|dbj|BAD84948.1| asparaginyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 431

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 130/293 (44%), Gaps = 32/293 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVR 66
           C D+     G  V+L+GWV+R R  G  +F+ +RD  GI QVV + D     +  AK V 
Sbjct: 7   CADVTPEMEGKKVKLAGWVYRKREVGKKVFIVLRDSSGIVQVVFSKDLNEEAYREAKKVG 66

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  + I+G V +       A       E+  +K++I+   +  P+     ++  +    
Sbjct: 67  IESSVIIEGTVKADPRAPTGA-------EVQGEKLQIIQNVDFFPIT----KDASDEFLL 115

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR   +   +  +  ++ + R  ++ + + E   PIL   + EG          
Sbjct: 116 DVRHLHLRSPKVAAIMKVKGTLMQAAREWLLQDGWYEVFPPILVTGAVEGGATLFKLKYF 175

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           ++ ++  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E ++++ 
Sbjct: 176 DRYAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMDL 232

Query: 247 DDILNTMENVLRGVFEEF-------------SNGNTVSNN---FLRICYDDAI 283
            DI+   E ++  + +                +  T+ N    F RI YD+AI
Sbjct: 233 WDIMKVEEELVSYMVQRTLELRKKEIELYRKDDIKTLKNAVPPFPRISYDEAI 285


>gi|296411579|ref|XP_002835508.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629292|emb|CAZ79665.1| unnamed protein product [Tuber melanosporum]
          Length = 492

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 38/279 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH---YGITQVVANPDSACFEIAKSVR--SEWVLCIDG 75
           V ++GWV  VR    + F  + D    + +  V+    S    +  SV+   EW   + G
Sbjct: 48  VTVAGWVRSVRRMKNVSFAHVSDGSTIHPLQAVLTKEQSENLSMGTSVKITGEWKESVGG 107

Query: 76  LVMSRSAETINANIITGQ--IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
                           GQ   EL A+K+E+L  A+ L  P+  + + PE +R     L L
Sbjct: 108 ---------------KGQQSKELLAEKVEVLGKADPLTYPLQKKYQTPEFLR---TLLHL 149

Query: 134 R-RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPSRVNQG 189
           R R   + N++  R+ II+++    +  +FI+C TPI+T+S  EGA +   +VP +    
Sbjct: 150 RQRIPANTNLLHLRSNIISTLTAFFVEHSFIQCHTPIITSSDCEGAGEVFAIVPEK---- 205

Query: 190 SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+  P+      QL    +A+   R + ++P FR E   + R   EFY L++E +F++ 
Sbjct: 206 -FFNTPKYLTVSGQLHLEALAAAVPRVWTLSPSFRAEKSGTTRHLSEFYMLEVEAAFIDT 264

Query: 247 -DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            D ++  +E++++ +    S              D A++
Sbjct: 265 LDPLVALIEDMVKTIVRSISTSRVGKETLSTAGEDKAVQ 303



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 4/93 (4%)

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC---GMPPHG 537
           +DL+     E+  G +R +  + +L      GI+        G L    +    G   HG
Sbjct: 399 FDLLVPAVGELIGGSLREYRYDELLTEMRRHGIAVGDGGEDEGSLRWYLELRKWGSTRHG 458

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G   G+DR+V  L G +N+RE + FP     CD
Sbjct: 459 GFGLGLDRLVCYLAGVENIREATAFPRWVGRCD 491


>gi|260663057|ref|ZP_05863950.1| asparaginyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260552678|gb|EEX25678.1| asparaginyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 431

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 124/286 (43%), Gaps = 32/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73
           V   VR+  W+   R  G I FL +RD     Q V      D   FE+A+ +R E  L +
Sbjct: 13  VNERVRIGVWLTDKRSSGKIAFLQLRDGTAFFQGVLLKNKVDEETFEMARHLRQEVSLWV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +       I   QIE    ++E++  ++E P+   G +E+       +R L L
Sbjct: 73  TGEIHEDTRSKFGYEI---QIE----ELELIGDSDEYPI---GNKEHGIDFLLDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R R+I +         F +   PILT ++PEG  D       +Q ++  
Sbjct: 123 RSSKPQAMMRIRDRVIRANYEFFGEHGFTKIDPPILTGNAPEGTTDLFHTEYFDQDAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y++   A   +R +   P FR E  ++ R   EF+ ++ EM+F+ Q++ L   
Sbjct: 181 LSQSGQLYEEA-GAMALNRVYSFGPVFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLELQ 239

Query: 254 EN----VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283
           E     +++ V ++ S    V               + RI YD+AI
Sbjct: 240 EQYVAYLIQKVIDDCSRELEVLGRDPETLKPFTQLPYPRISYDEAI 285


>gi|225569282|ref|ZP_03778307.1| hypothetical protein CLOHYLEM_05364 [Clostridium hylemonae DSM
           15053]
 gi|225162081|gb|EEG74700.1| hypothetical protein CLOHYLEM_05364 [Clostridium hylemonae DSM
           15053]
          Length = 443

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 14/244 (5%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           ++ G  V+++G VH +R  G + F+ +R   G+ Q V    +A F++ K +R    + I+
Sbjct: 21  TEAGESVKVNGAVHTIRNMGTVAFVILRKREGLLQGVYEEGAADFDL-KDLREADTIEIE 79

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGER-EYPESIRFKYRFL 131
           G++              G IE+  + + +L     + +PLP+   +       +  YR +
Sbjct: 80  GILEKNEK-------APGGIEIRMKHLTVLGRPADDMMPLPISKWKLNTSLEAKLNYRSI 132

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR          +  +  + R  +  + F E  TP + A S EG  +       ++ + 
Sbjct: 133 SLRNLRERAKFRIQEGLTRAFRDYLYGQGFTEIHTPKIGARSAEGGANLFRLDYFHRPA- 191

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+PQ YKQ+ M   FDR F+ AP FR E   + R   E+  LD EM +++  + + 
Sbjct: 192 -VLQQSPQLYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDSFEEIM 249

Query: 252 TMEN 255
            ME 
Sbjct: 250 AMET 253



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EI +GG R H   ++    +  G++++ +E        AF+ GMPPHGG
Sbjct: 355 TLSFDLLFRGMEITTGGQRIHDHGMLKDKIAARGMTEDGLEQYL----EAFRHGMPPHGG 410

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           I  G++R  M L G  N+RE +LFP
Sbjct: 411 IGIGLERFTMKLAGEDNIRETTLFP 435


>gi|261406095|ref|YP_003242336.1| asparaginyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261282558|gb|ACX64529.1| asparaginyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 431

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 119/295 (40%), Gaps = 31/295 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W++  R  G I FL +RD  G  Q   V +      +E AKS+  E  L +
Sbjct: 14  VGETVTIGAWINNKRSSGKIQFLQLRDGSGYIQGVVVKSEVSEQVWEDAKSLTQESSLYV 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++                 E++   IEI+ + E  P+     +E+       +R L L
Sbjct: 74  TGVIREEPRSQ-------SGYEMTVTGIEIIHLTENYPI---TPKEHGVDYLMDHRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +V R  II +++       F     PILT +S EG  +       ++ ++  
Sbjct: 124 RTQKQRAIMVIRAEIIRAVQEYFDTNGFTLVDPPILTPTSAEGTTNLFHTKYFDEDAY-- 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ EM+F + ++ L   
Sbjct: 182 LTQSGQLYMEA-AAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTDHEESLQVQ 240

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           E  +  V +               + S    +   F RI YD+AI    T   D+
Sbjct: 241 EQFISHVVQSVVKNCRQELETIGRDISKLEAIQAPFPRITYDEAIEFLHTQDFDI 295


>gi|19075852|ref|NP_588352.1| cytoplasmic aspartate-tRNA ligase Drs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74676078|sp|O74407|SYDC_SCHPO RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3618213|emb|CAA20876.1| cytoplasmic aspartate-tRNA ligase Drs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 580

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 34/288 (11%)

Query: 5   RTHS-CGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVA--NPDSACFE 60
           RT++   D+   + G  V L   V+  R  G  + F  +R  Y   Q +A  N D+   +
Sbjct: 90  RTYTQISDISAKNDGQTVLLRARVYTSRLQGNKMCFFSLRQKYDTIQALAVVNKDTISKQ 149

Query: 61  IAK---SVRSEWVLCIDGLVMSRSAETI-NANIITGQIELSAQKIEILSVAEELPLPVFG 116
           + K   S+  E ++ ++G+V  +S E I +A +   +I +S+  + I  + + LP  V  
Sbjct: 150 MVKWCGSISLESIVLVEGIV-KKSPEIIKSATVQDAEIHISSIYV-ISPIKKNLPFLVED 207

Query: 117 EREYPESIR---------------------FKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155
                E IR                        R LDLR  T       +  I  + R  
Sbjct: 208 AGRSEEQIRESEENAAEGDSKFVRVNLDTRLDNRVLDLRTPTNQAIFDIQAGICQAFREF 267

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +++ +F E  TP ++ +S EG  +           F  L Q+PQ YKQ+L+A+  +R F+
Sbjct: 268 LLSNSFNEIHTPKMSGASSEGGSNVFKIQYFKTDGF--LSQSPQLYKQMLIAADRERVFE 325

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
           I P FR ED  + R   EF  LD+EM+F E   +++  +E +   +F+
Sbjct: 326 IGPVFRAEDSNTYRHMTEFTGLDLEMAFNEHYHEVMEFIEKLFLYIFK 373



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 3/82 (3%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H  E++++    +G+S +V   ++     AF  G PPH G   
Sbjct: 494 YDFFMKGQEIMSGAQRIHDPELLVERMKALGVSPDVGLQQY---IDAFAIGCPPHAGGGI 550

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM  L   N+R  S FP
Sbjct: 551 GLERVVMFYLNLPNIRLASSFP 572


>gi|213403358|ref|XP_002172451.1| cytoplasmic aspartate-tRNA ligase Drs1 [Schizosaccharomyces
           japonicus yFS275]
 gi|212000498|gb|EEB06158.1| cytoplasmic aspartate-tRNA ligase Drs1 [Schizosaccharomyces
           japonicus yFS275]
          Length = 579

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 35/284 (12%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAK- 63
           +  D+  +  G  V +   V+  R  G  + F  +R  +   Q  VV N ++   ++ K 
Sbjct: 94  NISDISAAKDGEKVLIRARVYTSRLQGNKMCFFALRQKFSTVQGLVVVNKETISKQMVKF 153

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITG--------------------QIELSAQKI 101
             S+  E ++ ++G+V  +S E I +  +                       +E +A+  
Sbjct: 154 CGSIPLETIILVEGIV-KKSPELIKSTTVQDVEIQISSVFVVSSVKKQLPFLVEDAARSE 212

Query: 102 EILSVAEELPLPVFGEREYPESI---RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA 158
           + +  +EE      G+ ++   +   R   R LDLR  T       +  I  + R  ++ 
Sbjct: 213 QQIKASEESAKE--GDSKFVRVLLDTRLDNRVLDLRTPTNQAIFQIQAGICRAFRDYLLN 270

Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
             F E  TP +T +S EG  +       N   +  L Q+PQ YKQ+L+A+ FDR F+I P
Sbjct: 271 SKFTEIHTPKMTGASSEGGSNVFSIKYFNSTGY--LSQSPQLYKQMLIAADFDRVFEIGP 328

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVF 261
            FR E+  + R   EF  LD+EM+F E   +++  +EN+   +F
Sbjct: 329 VFRAEESNTYRHMTEFTGLDLEMAFDEHYHEVMGFIENLFLHIF 372



 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H  E++++  + +G+      N       AF+ G  PH G   
Sbjct: 494 YDFFMKGQEIMSGAQRIHDPELLVERMNALGVDP----NGLKDYIDAFRLGCVPHAGGGI 549

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++M  L   N+R  S FP
Sbjct: 550 GLERVLMFYLNLPNIRLASAFP 571


>gi|170070850|ref|XP_001869733.1| aspartyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167866765|gb|EDS30148.1| aspartyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 538

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 24/272 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANPDSACFEIAK---SV 65
           DL   +  + V + G VH  R  G   FL +R      Q  V  N  +   ++ K   SV
Sbjct: 85  DLSGCEKDALVWVRGRVHTTRSKGKQCFLVLRQQSSTVQCVVAVNDKTVSKQMVKFSGSV 144

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFG-----ERE 119
             E ++ +   V+  +A+       T  +EL A +  ++S A+ +LPL +       + +
Sbjct: 145 PRESIVDVRARVVPVAAKIEACTEQT--LELHATEFYLVSAAKAQLPLQIEDAARPEKSD 202

Query: 120 YPESIRFKY--------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
            PE+++ +         R LDLR             +    R  + A+ F E  TP + +
Sbjct: 203 DPEALKIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDILAAQGFTEIHTPKIIS 262

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +    S     ++  L Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R  
Sbjct: 263 AASEGGANVFTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHL 320

Query: 232 GEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262
            EF  LD+EM+F     ++L+T+ N    +F+
Sbjct: 321 TEFVGLDLEMAFKYHYHEVLDTIGNTFTEIFK 352



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++   +  I      ++      AF+ G PPH G   
Sbjct: 453 YDMFMRGEEILSGAQRIHDPEYLVERAKHHAIDT----SKIAAYIEAFRFGCPPHAGGGI 508

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 509 GMERVVMLYLGLDNIRKTSMFP 530


>gi|329929807|ref|ZP_08283483.1| asparagine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328935785|gb|EGG32246.1| asparagine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 431

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 119/295 (40%), Gaps = 31/295 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W++  R  G I FL +RD  G  Q   V +      +E AKS+  E  L +
Sbjct: 14  VGETVTIGAWINNKRSSGKIQFLQLRDGSGYIQGVVVKSEVSEQVWEDAKSLTQESSLYV 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++                 E++   IEI+ + E  P+     +E+       +R L L
Sbjct: 74  TGVIREEPRSQ-------SGYEMTVTGIEIIHLTENYPI---TPKEHGVDYLMDHRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +V R  II +++       F     PILT +S EG  +       ++ ++  
Sbjct: 124 RTQKQRAIMVIRAEIIRAVQEYFDTNGFTLVDPPILTPTSAEGTTNLFHTKYFDEDAY-- 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ EM+F + ++ L   
Sbjct: 182 LTQSGQLYMEA-AAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTDHEESLQVQ 240

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           E  +  V +               + S    +   F RI YD+AI    T   D+
Sbjct: 241 EQFISHVVQSVVKNCRQELETIGRDISKLEAIQAPFPRITYDEAIEFLHTQDFDI 295


>gi|171687685|ref|XP_001908783.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943804|emb|CAP69456.1| unnamed protein product [Podospora anserina S mat+]
          Length = 167

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 3/145 (2%)

Query: 456 HNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
           H+PFT P    +  L   + L+ +A  YDLV NG E+  G  R H +++    F  +   
Sbjct: 22  HHPFTAPLTDADVELMVTNPLAARADHYDLVLNGVELGGGSRRIHTAKMQEYVFREILKM 81

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
            +    +F  L  A + G PPH G A G DR+  +L G  +VR+V  FP S    DL + 
Sbjct: 82  SDKGVKQFSHLLEALRAGCPPHAGFALGFDRLCAVLTGTDSVRDVIAFPKSMKGEDLTVR 141

Query: 575 SPSTVSVEQL--RELGLRIVENPKK 597
           SP  ++ E+L    L  R  E  KK
Sbjct: 142 SPGKITSEELGTYHLAFRPKEEKKK 166


>gi|17551876|ref|NP_499089.1| aspartyl(D) tRNA Synthetase family member (drs-1) [Caenorhabditis
           elegans]
 gi|417839|sp|Q03577|SYDC_CAEEL RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3873792|emb|CAA79536.1| C. elegans protein B0464.1, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 531

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 146/364 (40%), Gaps = 55/364 (15%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVR 66
           ++ VS+    V + G +H  R  G   FL +R      QV             +   S+ 
Sbjct: 74  EINVSNATKDVWVRGRIHTTRSKGKNCFLVLRQGVYTVQVAMFMNEKISKQMLKFVSSIS 133

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVF-GEREYPES- 123
            E +  +D        +    +     +EL AQ++ ++S  A +LPL +    R  P   
Sbjct: 134 KESI--VDVYATINKVDNPIESCTQKDVELLAQQVFVVSTSAPKLPLQIEDASRRAPTDE 191

Query: 124 ----------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
                            R   R +DLR  T H     +  I N  R  +    F+E   P
Sbjct: 192 EKASEQENQLAVVNLDTRLDNRVIDLRTPTSHAIFRIQAGICNQFRNILDVRGFVEIMAP 251

Query: 168 -ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
            I++A S  GA  F V     +GS Y L Q+PQ YKQ+ +A  F++ + I P FR ED  
Sbjct: 252 KIISAPSEGGANVFEV--SYFKGSAY-LAQSPQLYKQMAIAGDFEKVYTIGPVFRAEDSN 308

Query: 227 SDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSN---------GNTVSNNFLR 276
           + R   EF  LD+EM+F     +++ T+  VL  +F+             GN       +
Sbjct: 309 THRHMTEFVGLDLEMAFNFHYHEVMETIAEVLTQMFKGLQQNYQDEIAAVGNQYPAEPFQ 368

Query: 277 IC-------YDDAI---RRYGT---DKPDLRNPI--IMHNVTEHFVHSEFRVFSKI-LSV 320
            C       Y DAI   R  G    D+ DL  P+   +  + +    ++F V  K  LSV
Sbjct: 369 FCEPPLILKYPDAITLLRENGIEIGDEDDLSTPVEKFLGKLVKEKYSTDFYVLDKFPLSV 428

Query: 321 NPGY 324
            P Y
Sbjct: 429 RPFY 432



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H ++++++   +  +    +++       +F+ G PPH G   
Sbjct: 446 YDMFMRGEEILSGAQRIHDADMLVERAKHHQVDLAKIQSYID----SFKYGCPPHAGGGI 501

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  N+R  SLFP
Sbjct: 502 GLERVTMLFLGLHNIRLASLFP 523


>gi|6321807|ref|NP_011883.1| Ded81p [Saccharomyces cerevisiae S288c]
 gi|731638|sp|P38707|SYNC_YEAST RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|500693|gb|AAB68874.1| Ded81p: Asparaginyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|151943961|gb|EDN62254.1| asparaginyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
 gi|190405803|gb|EDV09070.1| asparaginyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|256269240|gb|EEU04565.1| Ded81p [Saccharomyces cerevisiae JAY291]
 gi|259147047|emb|CAY80302.1| Ded81p [Saccharomyces cerevisiae EC1118]
 gi|285809921|tpg|DAA06708.1| TPA: Ded81p [Saccharomyces cerevisiae S288c]
 gi|323333337|gb|EGA74734.1| Ded81p [Saccharomyces cerevisiae AWRI796]
 gi|323354779|gb|EGA86613.1| Ded81p [Saccharomyces cerevisiae VL3]
          Length = 554

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 127/286 (44%), Gaps = 25/286 (8%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           S VG  V++SGW+HR+R +  +IF+ +RD  G  Q V + D A  +    +  E  + + 
Sbjct: 126 SKVGQRVKVSGWIHRLRSNKKVIFVVLRDGSGFIQCVLSGDLALAQQTLDLTLESTVTLY 185

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFL 131
           G ++    +        G +EL+    E++ +A   E+       E   P S+    R L
Sbjct: 186 GTIV----KLPEGKTAPGGVELNVDYYEVVGLAPGGEDSFTNKIAEGSDP-SLLLDQRHL 240

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR D L   +  R  ++ S+R     E+  E + P +  +  EG       +   + ++
Sbjct: 241 ALRGDALSAVMKVRAALLKSVRRVYDEEHLTEVTPPCMVQTQVEGGSTLFKMNYYGEEAY 300

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  +AS  D Y  I   FR E   + R   E+  ++ E++F+  DD+L 
Sbjct: 301 --LTQSSQLYLETCLASLGDVY-TIQESFRAEKSHTRRHLSEYTHIEAELAFLTFDDLLQ 357

Query: 252 TMENVL----RGVFEEFSNGNTVSN----------NFLRICYDDAI 283
            +E ++    + V E+   G  V             F+R+ Y DAI
Sbjct: 358 HIETLIVKSVQYVLEDPIAGPLVKQLNPNFKAPKAPFMRLQYKDAI 403


>gi|323337256|gb|EGA78509.1| Ded81p [Saccharomyces cerevisiae Vin13]
 gi|323348346|gb|EGA82594.1| Ded81p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 554

 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 25/286 (8%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           S VG  V++SGW+HR+R +  +IF+ +RD  G  Q V + D A  +    +  E  + + 
Sbjct: 126 SKVGQRVKVSGWIHRLRSNKKVIFVVLRDGSGFIQCVLSGDLALAQQTLDLTLESTVTLY 185

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFL 131
           G ++             G +EL+    E++ +A   E+       E   P S+    R L
Sbjct: 186 GTIVKLP----EGKTAPGGVELNVDYYEVVGLAPGGEDSFTNKIAEGSDP-SLLLDQRHL 240

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR D L   +  R  ++ S+R     E+  E + P +  +  EG       +   + ++
Sbjct: 241 ALRGDALSAVMKVRAALLKSVRRVYDEEHLTEVTPPCMVQTQVEGGSTLFKMNYYGEEAY 300

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  +AS  D Y  I   FR E   + R   E+  ++ E++F+  DD+L 
Sbjct: 301 --LTQSSQLYLETCLASLGDVY-TIQESFRAEKSHTRRHLSEYTHIEAELAFLTFDDLLQ 357

Query: 252 TMENVL----RGVFEEFSNGNTVSN----------NFLRICYDDAI 283
            +E ++    + V E+   G  V             F+R+ Y DAI
Sbjct: 358 HIETLIVKSVQYVLEDPIAGPLVKQLNPNFKAPKAPFMRLQYKDAI 403


>gi|239625351|ref|ZP_04668382.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519581|gb|EEQ59447.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 455

 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 127/265 (47%), Gaps = 30/265 (11%)

Query: 12  LGVSDV------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           LG+ +V      G  VR++G VH +R  G + F+ +R   G+ Q V    +   +I K +
Sbjct: 25  LGIQEVISGNHEGRTVRMNGTVHTIRHMGEVAFVILRKAEGLVQCVCEGAAGDVDI-KDL 83

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESI 124
           + E  + + G V  R  E           E+  + I ILS  A+ +P+PV  + +   S+
Sbjct: 84  KEECAVEVKGAV--RKEERAPHGF-----EIRLEDIRILSRPADTMPIPV-NKWKLNTSL 135

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGAR 178
             K   L LR  +L +NI +R +      I+   R  + ++ F E  TP + A   EG  
Sbjct: 136 ETK---LALRPISL-RNIRERAKFKIQEGIVRGFRDYLFSQGFTEIHTPKIVARGAEGGS 191

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +       N+ +   L Q+PQ YKQ  M   +DR F+ AP FR E   + R   E+  LD
Sbjct: 192 NVFKLDYFNKKA--ELGQSPQFYKQT-MVGVYDRVFETAPVFRAEKHNTTRHLNEYTSLD 248

Query: 239 MEMSFVEQ-DDILNTMENVLRGVFE 262
           +EM +++  +D+++    +L+ V E
Sbjct: 249 LEMGYIDGFEDVMDMETGMLQYVME 273



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G E+ +GG R H    +L+      +  + +E+        F+ GMPPHGG
Sbjct: 367 TLSFDLLFKGLEVTTGGQRIHDYHAILEKMGKRDMDPKDIESYL----MIFKYGMPPHGG 422

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M LL  +NVRE  +FP
Sbjct: 423 LGIGLERLTMRLLDEQNVRETCMFP 447


>gi|170290898|ref|YP_001737714.1| asparaginyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170174978|gb|ACB08031.1| asparaginyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 432

 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 128/296 (43%), Gaps = 33/296 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEI 61
           +TH   +L   + G  VRL+GWV R    GGI+F+ +RD  G  QVV    N        
Sbjct: 7   KTHYIAELRGLEEGENVRLAGWVQRKSELGGIVFIRMRDATGSVQVVLREGNLSEQELTA 66

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFGEREY 120
           A+    E  + ++G  + R           G +E+ A K  ++  +++ P+ P  G    
Sbjct: 67  ARGAGIEASIIVEG-SLRRDPRA------PGGLEVIASKFILVGDSKDFPIKPGVG---- 115

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-GARD 179
            E      R L +R   +   ++ R  ++ +     +   F+    P    ++ E GA  
Sbjct: 116 -EEFLLDNRHLHIRTTRMRNALMIRMEVMRATEEWFVNNGFVRVEAPTFVGAAVEGGATL 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F VP     G    L Q+ Q Y +  + S F+  + I P FR E  R+ R   EF+  + 
Sbjct: 175 FEVPY---FGKKAYLTQSSQFYLEAAIFS-FENVYTIQPSFRAEKSRTRRHLTEFWHAEA 230

Query: 240 EMSFVEQDDILNTMENVLRGVFEEF------------SNGNTVSNNFLRICYDDAI 283
           EM++ + + +++ +E++++ + E+                  +   F RI YD+A+
Sbjct: 231 EMAWADLNGMMDVVESLVKYIVEKVVERASDKLEALGRRMEAIEGRFPRITYDEAL 286


>gi|118085208|ref|XP_417219.2| PREDICTED: similar to Asparaginyl-tRNA synthetase 2
           (mitochondrial)(putative) [Gallus gallus]
          Length = 478

 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 24/260 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69
           LG  +    V++ GWV  VR    ++FL I D   +   QVVA+P   C ++      E 
Sbjct: 34  LGAQEEAGEVKVQGWVRSVRSQKEVLFLHINDGSSLESLQVVADPSLECRDLTFGSAVE- 92

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              + G ++    +  N       +EL A+ I ++   + L  P   +  +P     ++ 
Sbjct: 93  ---VQGKLLKSPHKMQN-------MELRAEAIHVVGPCDTLSFPFKIKERHPLEYVRQFP 142

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL-------V 182
            L  R + +   +  R+    ++        ++   TPI+T++  EGA D          
Sbjct: 143 HLRCRTNAVGALLRIRSEATAAIHSFFQDNGYVHIHTPIITSNDCEGAGDLFQIETSHEA 202

Query: 183 PSRVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                +  F+ +P       QL   +M+  F R F   P FR E+ +S R   EFY ++ 
Sbjct: 203 KEAAEKNHFFNVPTFLTVSGQLHLEVMSGAFTRVFTFGPTFRAENSQSRRHLAEFYMVEA 262

Query: 240 EMSFVEQ-DDILNTMENVLR 258
           E+SF E   DI+  ME++ +
Sbjct: 263 ELSFTESLQDIMQVMEDLFK 282


>gi|116514020|ref|YP_812926.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|116093335|gb|ABJ58488.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|325125709|gb|ADY85039.1| Asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 432

 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 117/283 (41%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           VR+  W+   R  G I+FL +RD     Q V   +      FE AK +R E    + G +
Sbjct: 18  VRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEASFYLTGTI 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    +E++S  E  P+     +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQISDLEVVSNNEGYPIT---NKEHGIDFLLDHRHLWLRSRR 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R RI  +       E F++   P+L  S+PEG  +       N  ++  L Q+
Sbjct: 128 PFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEGTTELFHIDYFNHDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y ++  A  F + F   P FR E  ++ R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEV-GAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDESLDLQERFL 244

Query: 258 RGV---------FEEFSNGNTVSN-------NFLRICYDDAIR 284
             V         +E    G  V         N+ R+ YDDA++
Sbjct: 245 SYVVGQVLEHCEYELSILGRDVDKLRPAAEGNYTRLSYDDAVK 287


>gi|73988101|ref|XP_851061.1| PREDICTED: similar to CG6796-PA [Canis familiaris]
          Length = 477

 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 22/255 (8%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLC 72
           S  G  V++ GW+  VR    ++FL I D   +   QVVA+      E+A     E    
Sbjct: 38  STSGERVKVQGWIRSVRSQKEVLFLHINDGSSLESLQVVADSSFDNRELAFGSSVE---- 93

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G ++   ++  N       +EL A+KIE++   +    P   +  +P     +Y  L 
Sbjct: 94  VQGQLVKSPSKKQN-------MELKAEKIEVVGNCDATAFPFKYKERHPLEYLRQYPHLR 146

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVN 187
            R + L   +  R+    ++        F+   TPI+T++  EGA +   + PS   ++ 
Sbjct: 147 CRTNALGSILRVRSEATAAIHSFFKDNGFVHIHTPIITSNDCEGAGELFQVEPSSKIKMP 206

Query: 188 QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           + +F+ +P       QL   +M+  F + F   P FR E+ +S R   EFY ++ E+SFV
Sbjct: 207 EENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEISFV 266

Query: 245 EQ-DDILNTMENVLR 258
           E   D++  ME + +
Sbjct: 267 ESLQDLMQVMEGLFK 281


>gi|104774004|ref|YP_618984.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|104774115|ref|YP_619095.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116514186|ref|YP_813092.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|1711643|sp|P54262|SYN_LACDA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|1321875|emb|CAA61603.1| asparagine--tRNA ligase [Lactobacillus delbrueckii]
 gi|103423085|emb|CAI97806.1| Asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|103423196|emb|CAI97997.1| Asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116093501|gb|ABJ58654.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 432

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 117/283 (41%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           VR+  W+   R  G I+FL +RD     Q V   +      FE AK +R E    + G +
Sbjct: 18  VRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEASFYLTGTI 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    +E++S  E  P+     +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQISDLEVVSNNEGYPIT---NKEHGIDFLLDHRHLWLRSRR 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R RI  +       E F++   P+L  S+PEG  +       N  ++  L Q+
Sbjct: 128 PFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEGTTELFHIDYFNHDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y ++  A  F + F   P FR E  ++ R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEV-GAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDESLDLQERFL 244

Query: 258 RGV---------FEEFSNGNTVSN-------NFLRICYDDAIR 284
             V         +E    G  V         N+ R+ YDDA++
Sbjct: 245 SYVVGQVLEHCEYELSILGRDVDKLRPAAEGNYTRLSYDDAVK 287


>gi|298706663|emb|CBJ29592.1| Aspartyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 631

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 137/324 (42%), Gaps = 44/324 (13%)

Query: 8   SCGDLGVSD---VGSFVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVV-----ANPDSA- 57
           S  DLG      VG  V + G VH+VR  GG  FL +R D     Q V      NP+ + 
Sbjct: 167 SVKDLGAPGGVPVGREVWIRGRVHQVRGKGGSAFLVVRQDTASTVQAVHFKDKENPEDSR 226

Query: 58  -CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI-----------------ELSAQ 99
              +   ++  E ++ + GL++  + ++   N +  +I                 E +A+
Sbjct: 227 RMIKFVGTLPLESIVDVKGLLVEANVKSCTQNNVEIKIDSVYAVSRASLFLPFSVEDAAR 286

Query: 100 KIEILSVAEEL--PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157
             E +  ++E   P P  G+      +R   R+LDLR    +  +  ++ +    R  + 
Sbjct: 287 SEEEVEASQETGRPFPRLGQ-----DLRLDNRWLDLRTPANNAIMRLQSGVCQLFRESLY 341

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
           A+ F+E  TP +     EG            G    L Q+PQ YKQ+ +++   R F++ 
Sbjct: 342 AQGFMEIHTPKIIPGESEGGAGVFTTDYF--GKQACLAQSPQLYKQMAISADMGRVFEVG 399

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           P FR E+  + R   EF  LD+EMS  +  ++++  + N  + +F           + +R
Sbjct: 400 PVFRAENSNTRRHLTEFNGLDLEMSITDHYNEVIQVLHNTFKSIFSGLEERYKDQLDAVR 459

Query: 277 ICYDDAIRRYGTDKPDLRNPIIMH 300
           + Y     R   +      P+++H
Sbjct: 460 MQYPSTAVRVTEE------PLVVH 477



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 4/88 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+  G EI SG  R H +++++Q     G+  E + +       AF+ G PPHGG   
Sbjct: 546 YDLILRGQEICSGAQRCHDADMLMQILEEKGVPAEPLSDYIN----AFRHGCPPHGGGGV 601

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G++RIV L LG  N+R+ S+FP   + C
Sbjct: 602 GLERIVFLYLGLDNIRKASMFPRDPSRC 629


>gi|223947835|gb|ACN28001.1| unknown [Zea mays]
          Length = 546

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ--VVANPDSAC----FEIA 62
           GDL  S  G  V + G    +RP    + F+ +R      Q  +VA+ D+         A
Sbjct: 87  GDLDDSAAGRSVLIRGAAQAIRPVSKKMAFVVLRQSMSTVQCVLVASADAGVSTQMVRFA 146

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPL--------- 112
            ++  E ++ ++G+V S   E + A   T Q+E+  +KI  ++ A   LP+         
Sbjct: 147 TALSKESIVDVEGVV-SLPKEPLKAT--TQQVEIQVRKIYCINRAIPTLPINLEDAARSE 203

Query: 113 ------PVFGER--EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
                  + GE+     +  R  YR +DLR  +       + ++ N  R  ++++NF+  
Sbjct: 204 ADFEKAELAGEKLVRVGQDTRLNYRAIDLRTPSNQAIFRIQCQVENKFRDFLLSKNFVGI 263

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP L + S EG     V   +  G    L Q+PQ YKQ+ ++ GF+R F++ P FR E+
Sbjct: 264 HTPKLISGSSEGGA--AVFKLLYNGQPACLAQSPQLYKQMAISGGFERVFEVGPVFRAEN 321

Query: 225 PRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSN 266
             + R   EF  LD EM   E   ++ + ++ +   +F+  S 
Sbjct: 322 SNTHRHLCEFVGLDAEMEIKEHYFEVCDIIDGLFVSIFKHLSE 364



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H  E++ +  +  GI    +         +F  G+PPHGG   
Sbjct: 461 FDVFIRGEEIISGAQRIHTPELLAKRATECGIDVSTI----SAYIESFSYGVPPHGGFGV 516

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML     N+R+ SLFP
Sbjct: 517 GLERVVMLFCALNNIRKTSLFP 538


>gi|226505476|ref|NP_001149817.1| LOC100283444 [Zea mays]
 gi|195634857|gb|ACG36897.1| aspartyl-tRNA synthetase [Zea mays]
          Length = 546

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ--VVANPDSAC----FEIA 62
           GDL  S  G  V + G    +RP    + F+ +R      Q  +VA+ D+         A
Sbjct: 87  GDLDDSAAGRSVLIRGAAQAIRPVSKKMAFVVLRQSMSTVQCVLVASADAGVSTQMVRFA 146

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPL--------- 112
            ++  E ++ ++G+V S   E + A   T Q+E+  +KI  ++ A   LP+         
Sbjct: 147 TALSKESIVDVEGVV-SLPKEPLKAT--TQQVEIQVRKIYCINRAIPTLPINLEDAARSE 203

Query: 113 ------PVFGER--EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
                  + GE+     +  R  YR +DLR  +       + ++ N  R  ++++NF+  
Sbjct: 204 ADFEKAELAGEKLVRVGQDTRLNYRAIDLRTPSNQAIFRIQCQVENKFRDFLLSKNFVGI 263

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP L + S EG     V   +  G    L Q+PQ YKQ+ ++ GF+R F++ P FR E+
Sbjct: 264 HTPKLISGSSEGGA--AVFKLLYNGQPACLAQSPQLYKQMAISGGFERVFEVGPVFRAEN 321

Query: 225 PRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSN 266
             + R   EF  LD EM   E   ++ + ++ +   +F+  S 
Sbjct: 322 SNTHRHLCEFVGLDAEMEIKEHYFEVCDIIDGLFVSIFKHLSE 364



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H  E++ +  +  GI    +         +F  G+PPHGG   
Sbjct: 461 FDVFIRGEEIISGAQRIHTPELLAKRATECGIDVSTI----SAYIESFSYGVPPHGGFGV 516

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML     N+R+ SLFP
Sbjct: 517 GLERVVMLFCALNNIRKTSLFP 538


>gi|224004380|ref|XP_002295841.1| aspartate-tRNA ligase or aspartyl tRNA synthetase [Thalassiosira
           pseudonana CCMP1335]
 gi|209585873|gb|ACI64558.1| aspartate-tRNA ligase or aspartyl tRNA synthetase [Thalassiosira
           pseudonana CCMP1335]
          Length = 480

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 134/302 (44%), Gaps = 36/302 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVV-----ANPDSAC--FEIAKSVRSEW 69
           GS V L G V+ +R  GG  FL +R + +   Q        NP+ +    +  KS+ +E 
Sbjct: 27  GSKVWLRGRVNSIRAKGGSCFLVLRQNSFDTIQACYFKDKENPEQSAKMLKYLKSLTTES 86

Query: 70  VLCIDG----------------LVMSRSAETINAN-IITGQIELSAQKIEILSVAEEL-- 110
           ++ ++G                LV++R     NA+ ++   +E +A+  + +  ++E   
Sbjct: 87  MIDLEGEVSTAEVRSCSIQDAELVITRIHSVSNADAMLPFLVEDAARSEKEVEESQETDR 146

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           P P  G+      +R   R+LDLR    +  +  ++ +    R  + ++ F+E  TP L 
Sbjct: 147 PFPRLGQ-----ELRLDNRWLDLRAPANNAIMRIQSAVCQLFRESLYSQGFVEIHTPKLI 201

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           A   E             G+   L Q+PQ YKQ+ ++S  DR F+I P FR E+  + R 
Sbjct: 202 AGESESGAGVFTTDYF--GTTACLAQSPQLYKQMAISSDLDRVFEIGPVFRAENSHTRRH 259

Query: 231 PGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             EF  LD+EMS  E   + L  +  + + +FE            +R  Y+     + TD
Sbjct: 260 LCEFTGLDLEMSINEHYMETLEVVHKMFKHIFENLETRWARELEVIRTQYESEPVTF-TD 318

Query: 290 KP 291
           +P
Sbjct: 319 EP 320



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 3/88 (3%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E++ +  +  GI    + +       +F+ G+ PH G   
Sbjct: 394 YDMFIRGQEICSGAQRCHDPELVTEIINKKGIE---IGDGLKTYIDSFRHGVSPHAGAGI 450

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G++R+V L LG  NVR+ S+FP   N C
Sbjct: 451 GLERVVFLYLGLDNVRKASMFPRDPNRC 478


>gi|253745047|gb|EET01155.1| Aspartyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 555

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 125/294 (42%), Gaps = 33/294 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-------------NPDSACFEIAK 63
           +G  + +   +H VR  G   FL +R    I Q                +   A  +   
Sbjct: 94  IGRKIWVRARIHTVRATGKSAFLMLRGKMAILQACCFVPGKAENSTEKIDEYRAMIKYIN 153

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122
           S+  E V+ I G V S  +    A+      EL  ++I  +S  A ++PL V  +   P+
Sbjct: 154 SLPPESVVEIYGAVSSVDSPIKTASAEHRGYELQLERIYAISRAASQMPLQV-DDAMRPD 212

Query: 123 SI---------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
           S+               +  YR +DLR       +  R+ I +  R  +    FIE +TP
Sbjct: 213 SVYQAPDSQYVHPGKDTKLDYRVIDLRTPANQAIMRVRSAIAHEFRSFLDNAGFIEINTP 272

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            + A + EG       +  N  +   L Q+PQ YKQ+ ++SGF R ++I P FR E+  +
Sbjct: 273 KIIAGTSEGGAAVFNVNYFNTKA--CLAQSPQLYKQMCISSGFGRVYEIGPVFRAENSHT 330

Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
            R   EF  LD+EM   E   ++L  + ++++ +F+          + +R  YD
Sbjct: 331 HRHLCEFTGLDLEMEIYESYSEVLTLLGDLMKHIFKTVEAKCAKEISVIRAQYD 384



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E++ +      +  E +++       AF+ G  PHGG   
Sbjct: 470 YDMFVRGEEICSGAQRVHNPELLEKQCRERNVDPESLKSYID----AFKYGCAPHGGAGL 525

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           G++RIVML+LG +N R+  LFP +Q
Sbjct: 526 GLERIVMLMLGIENCRQTCLFPRTQ 550


>gi|325116898|emb|CBZ52451.1| hypothetical protein NCLIV_022400 [Neospora caninum Liverpool]
          Length = 549

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 22/267 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA----CFEIAKSVRSEWVLC 72
           VG  V + G V   R  G + FL +R+     Q V +          +   S+  E V+ 
Sbjct: 102 VGETVWIRGRVQESRGKGSVAFLMLRERQATVQGVLDAKRGNSKDMIKWTTSLPLESVVD 161

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPES-------- 123
           + G V+    E I +    G +E+  +KI  +S  A+ELP  +  +   PE         
Sbjct: 162 VQGEVVKPEVE-IQSTSQKG-VEVLVKKIFCVSKAAQELPFQL-RDAMRPEDGTEGGIRV 218

Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   R LDLR          ++  I   R  ++   F+E  +P L   + EG    
Sbjct: 219 NMDTRLDNRILDLRTPVNQAIFRIQSETIQLFREFLLTNKFVELHSPKLIGGASEGGASC 278

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 N+ +   L Q+PQ YKQ+ M + F+R F+I P FR E+  + R   EF  LD+E
Sbjct: 279 FTLKYFNRDA--CLAQSPQLYKQMAMCADFERVFEIGPVFRAENSNTHRHLCEFTGLDLE 336

Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSN 266
           M+F E   ++L+ ++ + + +F+  S 
Sbjct: 337 MTFKEHYSEVLDVLDELFKFIFKGLSE 363



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD      EI SG  R H ++++ Q     G+    ++        +F+ G  PHGG   
Sbjct: 464 YDFFMRNEEIISGAQRVHDADLLTQRCLECGVPPSSIQTYID----SFRLGTAPHGGAGI 519

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LGAKN+R+VSLFP
Sbjct: 520 GLERVVMLFLGAKNIRQVSLFP 541


>gi|126134255|ref|XP_001383652.1| aspartyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|126095801|gb|ABN65623.1| aspartyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 573

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 28/280 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSACFEIAK---- 63
           DL  ++ G  V     VH  R  G  ++FL +R    + Q +   N ++    I+K    
Sbjct: 112 DLSAANDGEQVIFRARVHNSRQQGATMLFLTLRQQSELIQTLFKTNKETDSNAISKQMVK 171

Query: 64  ---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF-GER 118
              S+  E ++ + G V  +  E I ++ +   +E+   KI  +S   E+LPL +    R
Sbjct: 172 WASSINLESIVVVHGTV-KKVDELIKSSTVQ-DVEIHVSKIYTISETPEQLPLLIEDASR 229

Query: 119 EYPES-----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
              E+            R   R +DLR  T       ++ +    R  +    F E  TP
Sbjct: 230 SEAEAEALKLPIVNLDTRLDARVIDLRTPTNQAIFKIQSGVCALFREFLAGRGFTEIHTP 289

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            + A++ EG  +    +     +F A  Q+PQ YKQ L+A+ F++ +++AP FR E+  +
Sbjct: 290 KIIAAASEGGSNVFQINYFKGSAFLA--QSPQLYKQQLIAADFEKVYEVAPVFRAENSNT 347

Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
            R   EF  LD+EM+F E   ++L+ + ++   +F E   
Sbjct: 348 HRHMTEFMGLDLEMAFEEHYHEVLDILADLFVFIFTELKK 387



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 6/84 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG--GLYRAFQCGMPPHGGI 539
           YD    G EI SG  R H   ++ +  +    + EV  N  G      AF  G PPH G 
Sbjct: 486 YDFFMRGEEILSGAQRIHDPALLTERLT----AHEVDPNVAGVHEYLEAFTYGCPPHAGG 541

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             G++R+VM  L  KN+R  SLFP
Sbjct: 542 GIGLERVVMFYLDLKNIRRASLFP 565


>gi|110589240|gb|ABG77129.1| aspartyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 159

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 2/78 (2%)

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
           CFRDED R+DR P EF QLD+E SF+ +D I++  E ++R +F+E   G  + N F R+ 
Sbjct: 4   CFRDEDLRADRQP-EFTQLDIETSFLSEDQIMDLNEEMIRQLFKEVL-GTDLPNPFPRMT 61

Query: 279 YDDAIRRYGTDKPDLRNP 296
           YD+A+ RYG+D+PDLR P
Sbjct: 62  YDEAMERYGSDRPDLRVP 79


>gi|21672688|ref|NP_660755.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009350|sp|Q8K9C5|SYK_BUCAP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|21623328|gb|AAM67966.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 503

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 132/269 (49%), Gaps = 24/269 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
             Y   +  +L V +V   V ++G + + R  G   F  ++D  G  Q+         + 
Sbjct: 48  QEYENKTINELKVLNVE--VTIAGRMIQRRIMGKASFFTLQDMEGKIQIYTREKEITSDF 105

Query: 62  AKSVRSEW----VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             +   +W    +L I+G++             TG++ + ++K++IL+ +   PLP    
Sbjct: 106 YNNHFKKWDIGDILGIEGILFKTK---------TGELSIFSKKLKILTKSLR-PLPDKFH 155

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG 176
               +  R++ R+LDL  +    NI K R++II  +R  MI  NF+E  TP+L  + P G
Sbjct: 156 GLSNQEKRYRKRYLDLISNNQLFNIFKNRSKIIRFIRNFMIENNFLEVETPML-HNIPGG 214

Query: 177 A--RDFLV-PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           A  R F+   + +N+  +  +  AP+ Y + L+  GF+R F++   FR+E   +   P E
Sbjct: 215 ANARPFITYHNEINEEMYLRI--APELYLKQLIVGGFERIFELNRNFRNEGVSARHNP-E 271

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           F  ++  +++   +D++N  EN+L+ + +
Sbjct: 272 FTMMEAYIAYSNYEDMMNFTENLLKNIIK 300



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY----- 526
           ND  S    +++L   G+EI +G    + SE     F N     E  +N+   LY     
Sbjct: 401 NDFNSNVTDRFELFIAGYEIGNGFSELNDSEDQKNRFLNQMKIAEKEKNK-DMLYDENYI 459

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            A + G+PP  G+  GIDR++M+L    ++R+V LFP  ++F
Sbjct: 460 EALKYGLPPTSGLGIGIDRLIMILTNQISIRDVILFPTLRSF 501


>gi|315646475|ref|ZP_07899593.1| asparaginyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315278118|gb|EFU41438.1| asparaginyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 431

 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 114/285 (40%), Gaps = 31/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W++  R  G I FL +RD  G  Q   V +      ++ AKS+  E  L +
Sbjct: 14  VGETVTIGAWINNKRSSGKIQFLQLRDGSGYIQGVVVKSEVSEQVWDDAKSLTQESSLYV 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++                 E++   IEI+ + E  P+     +E+       +R L L
Sbjct: 74  TGVIREEPRSQ-------SGYEMTVTGIEIIHLTENYPI---TPKEHGVDYLMDHRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +V R  II +++       F     PILT +S EG  +        + ++  
Sbjct: 124 RTQKQRAIMVIRAEIIRAVQAYFDTNGFTLVDPPILTPTSAEGTTNLFHTKYFEEDAY-- 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ EM+F + ++ L   
Sbjct: 182 LTQSGQLYMEA-AAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTDHEESLQVQ 240

Query: 254 ENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAI 283
           E                 L  +  + S    +   F RI YD+AI
Sbjct: 241 EQFISYVVQSVVKNCRQELEAIGRDISKLEAIQAPFPRITYDEAI 285


>gi|309807984|ref|ZP_07701910.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308168773|gb|EFO70865.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
          Length = 433

 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 121/284 (42%), Gaps = 34/284 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G I+FL  RD     Q V    N     FE AK++R E  L + G  
Sbjct: 19  VKMHVWLTDKRSSGKIMFLQFRDGTAFFQAVLLKKNVSEELFEQAKNLRQEASLYVTG-- 76

Query: 78  MSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                 TIN +  +    EL     ++++  +  P+   G +E+       +R L LR  
Sbjct: 77  ------TINKDERSHFGYELQISDFQVVTNNDGYPI---GNKEHGIDFLLDHRHLWLRSK 127

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R     ++        FI+   PIL  S+PEG  +       N  ++  L Q
Sbjct: 128 RPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEGTTELFHIEYFNSDAY--LSQ 185

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y ++  A  F + F   P FR E+ ++ R   EF+ ++ EM+++ QD+ L   E +
Sbjct: 186 SGQLYGEV-GAHAFGKIFTFGPTFRAEESKTRRHLTEFWMMEPEMAWMHQDESLEIQEGL 244

Query: 257 LRGVFEEFSNG----------------NTVSNNFLRICYDDAIR 284
           L+ V ++  +                  T   NF R+ YD+A++
Sbjct: 245 LKFVTKKILDNCEYELSILGRDPEKLRPTTEGNFARLSYDEAVK 288


>gi|157868974|ref|XP_001683039.1| aspartyl-trna synthetase [Leishmania major strain Friedlin]
 gi|68223922|emb|CAJ04412.1| putative aspartyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 641

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 125/271 (46%), Gaps = 17/271 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SCG+ G    G  V +   + R R  G + FL +R     +           + A+S+  
Sbjct: 124 SCGESGCVREGDEVTVRARLERTRGRGKLAFLHLRQPPLESVQAVCEGKELTKQARSITL 183

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRF 126
           E ++ + G+V  R A+T   +      EL    + ++S  A  LP P + +       R 
Sbjct: 184 ESIVDVTGIV--RRADTPVQSTTCQGWELQVTALHVVSQAATPLPFP-YRDTNARLDTRL 240

Query: 127 KYRFLDLRRDTLHKNIVKRTRIIN----SMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +DLR +     ++  +R+++    S R  ++A +FIE  TP L  ++ EG  +   
Sbjct: 241 NHRVMDLRTE----KMIAASRLVSALGQSFRNELLARDFIEVHTPKLLGAASEGGSNVFR 296

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                + ++ A  Q+PQ +KQ+++     R F++ P FR E+  + R   EF  LD EM 
Sbjct: 297 VDYFERKAYLA--QSPQLHKQMMVMGDAMRVFEVGPVFRAENSLTHRHLTEFVGLDGEMV 354

Query: 243 FVE-QDDILNTMENVLRGVFEEFS--NGNTV 270
             +   ++L+ +E V+  V    +  +GN +
Sbjct: 355 IKDSHTEVLDVLEPVMCAVLAHLTQQHGNLI 385



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E++ Q  S   + K  V++       +F+ G  PHGG   
Sbjct: 556 YDMYLRGEEICSGAQRVHQIELLEQRLSAKKVDKVSVKD----YVDSFRYGAWPHGGFGL 611

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RI +  LG  ++R+VSLFP
Sbjct: 612 GLERIALFFLGLDDIRQVSLFP 633


>gi|320584022|gb|EFW98234.1| aspartyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 557

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 125/276 (45%), Gaps = 26/276 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPDSACFEIAK---SV 65
           L   D G  V     VH  R  G  + F   R    + Q  + AN DS   ++ K   S+
Sbjct: 101 LTPQDDGKEVVFRARVHNSRQQGATMSFFLFRQQDELIQGLIKANGDSVSKQMVKWAASL 160

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF-GEREYPES 123
             E ++ + G+V  +  + +  +     +E+S  KI  +S    +LPL +    R   E+
Sbjct: 161 SLESIVLVHGVV--KKVDELVKSATIQDVEISISKIYTISETPAQLPLLIEDASRSDAEA 218

Query: 124 -----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                       R   R +DLR  T       ++ I    +  ++  NF+E  TP L A+
Sbjct: 219 EASGLPVVNLDTRLDSRVIDLRTVTNQAIFRLQSGICQLFKEFLLERNFVETHTPKLIAA 278

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + EG  +          +F A  Q+PQ YKQ L+A+ F+R F+IAP FR E+  + R   
Sbjct: 279 ASEGGANVFKVDYFKGSAFLA--QSPQFYKQQLIAADFERVFEIAPVFRAENSNTHRHMT 336

Query: 233 EFYQLDMEMSFVEQD--DILNTMENVLRGVFEEFSN 266
           EF  LD+EM+ +E+D  ++++ +  +   +F E   
Sbjct: 337 EFVGLDLEMA-IEEDYHEVVDLLSELFVFIFSELKT 371



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 8/85 (9%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---YRAFQCGMPPHGG 538
           YD    G EI SG  R H   ++ +      I    V+    GL    +AF  G  PH G
Sbjct: 470 YDFFMRGEEILSGAQRIHDPVLLAER-----IKAHDVDTTTPGLSDYIQAFTYGCAPHAG 524

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
              G++R++M  L  KN+R  SLFP
Sbjct: 525 GGIGLERVLMFFLDLKNIRRASLFP 549


>gi|253577515|ref|ZP_04854828.1| asparaginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251843055|gb|EES71090.1| asparaginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 431

 Score = 80.9 bits (198), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 115/285 (40%), Gaps = 31/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCI 73
           VG  V +  W++  R  G I FL +RD  G  Q V   +    E    AKS+  E  + +
Sbjct: 14  VGEQVVIGSWLNNKRSSGKIQFLQLRDGTGYIQAVVVKNEVSEETWNKAKSLTQESSMYV 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++                 E++   IEI+ + E  P+     +E+       +R L L
Sbjct: 74  TGVIREEPRSK-------SGYEMTVSDIEIIQLTENYPI---TPKEHGVDFLMDHRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +V R  II +++       F     PILT +S EG  +       ++ ++  
Sbjct: 124 RSSKQRAIMVIRAEIIRAVQEFFDQNGFTLVDPPILTPTSAEGTTNLFHTKYFDEDAY-- 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ EM+F + ++ L   
Sbjct: 182 LTQSGQLYMEA-AAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTDHEESLKIQ 240

Query: 254 ENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAI 283
           EN                L  V  + S    +   F RI YD+AI
Sbjct: 241 ENFITHVVQSVLKNCRAELEAVGRDVSKLEAIQAPFPRITYDEAI 285


>gi|302191306|ref|ZP_07267560.1| asparaginyl-tRNA synthetase [Lactobacillus iners AB-1]
          Length = 432

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 120/284 (42%), Gaps = 34/284 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G I+FL  RD     Q V    N     FE AK++R E  L + G  
Sbjct: 18  VKMHVWLTDKRSSGKIMFLQFRDGTAFFQAVLLKKNVSEELFEQAKNLRQEASLYVTG-- 75

Query: 78  MSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                 TIN +  +    EL     ++++  +  P+   G +E+       +R L LR  
Sbjct: 76  ------TINKDERSHFGYELQISDFQVVTNNDGYPI---GNKEHGIDFLLDHRHLWLRSK 126

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R     ++        FI+   PIL  S+PEG  +       N  ++  L Q
Sbjct: 127 RPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEGTTELFHIEYFNSDAY--LSQ 184

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y ++  A  F + F   P FR E+ ++ R   EF+ ++ EM+++ QD+ L   E +
Sbjct: 185 SGQLYGEV-GAHAFSKIFTFGPTFRAEESKTRRHLTEFWMMEPEMAWMHQDESLEIQEGL 243

Query: 257 LRGVFEEFSNG----------------NTVSNNFLRICYDDAIR 284
           L+ V +   +                  T   NF R+ YD+A++
Sbjct: 244 LKFVTKRILDNCEYELSILGRDPEKLRPTTEGNFARLSYDEAVK 287


>gi|311263597|ref|XP_003129750.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           [Sus scrofa]
          Length = 477

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 128/281 (45%), Gaps = 31/281 (11%)

Query: 12  LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE 68
           LG  +V G  V++ GW+  VR    ++FL + D   +   QVVA+      E+A     E
Sbjct: 34  LGAQNVNGERVKVQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSSFDSRELAFGSSVE 93

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
               + G ++   ++  N       +EL A+KIE++   +    P+  +  +P     +Y
Sbjct: 94  ----VQGQLVKSPSKGQN-------VELKAEKIEVVGNCDVKAFPLKYKERHPLEYLRQY 142

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS-- 184
             L  R + L   +  R+    ++        F+   TP++T++  EGA +   + PS  
Sbjct: 143 PHLRCRTNVLGSILRVRSEATAAVHSFFKDSGFVHIHTPVITSNDCEGAGELFQVEPSSK 202

Query: 185 -RVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +V   +F+++P       QL   +M+  F + F   P FR E+ ++ R   EFY ++ E
Sbjct: 203 IKVPDENFFSVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQTRRHLAEFYMVEAE 262

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
           +SF+E    L  +  V+ G+F+      T +   L  C +D
Sbjct: 263 ISFLES---LQDLMQVMEGLFK------TATRAVLASCQED 294


>gi|294498164|ref|YP_003561864.1| asparaginyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294348101|gb|ADE68430.1| asparaginyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 430

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 116/286 (40%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A  +   F++AKS+  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGSGFMQGVVVKAEVEEETFKLAKSMTQESSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V                 EL+   +E++  A + P+     +E+        R L L
Sbjct: 72  TGVVREDERSPFG-------YELTVTSLEVIHEAVDYPI---TPKEHGTEFLMDNRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +         F +   PILT S+PEG  +        + ++  
Sbjct: 122 RSKRQHAVMKVRNEIIRATYEFFNENGFTKVDPPILTGSAPEGTTELFHTKYFEEDAY-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F + +D L   
Sbjct: 180 LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYQFEDNLKVQ 238

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR 284
           E  +  V +               + S    +   F RI YD+A++
Sbjct: 239 EEYVSHVVQSVLTNCKLELNVLGRDTSKLEQIKAPFPRISYDEALK 284


>gi|259500617|ref|ZP_05743519.1| asparagine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|259168001|gb|EEW52496.1| asparagine-tRNA ligase [Lactobacillus iners DSM 13335]
          Length = 433

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 120/284 (42%), Gaps = 34/284 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G I+FL  RD     Q V    N     FE AK++R E  L + G  
Sbjct: 19  VKMHVWLTDKRSSGKIMFLQFRDGTAFFQAVLLKKNVSEELFEQAKNLRQEASLYVTG-- 76

Query: 78  MSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                 TIN +  +    EL     ++++  +  P+   G +E+       +R L LR  
Sbjct: 77  ------TINKDERSHFGYELQISDFQVVTNNDGYPI---GNKEHGIDFLLDHRHLWLRSK 127

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R     ++        FI+   PIL  S+PEG  +       N  ++  L Q
Sbjct: 128 RPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEGTTELFHIEYFNSDAY--LSQ 185

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y ++  A  F + F   P FR E+ ++ R   EF+ ++ EM+++ QD+ L   E +
Sbjct: 186 SGQLYGEV-GAHAFSKIFTFGPTFRAEESKTRRHLTEFWMMEPEMAWMHQDESLEIQEGL 244

Query: 257 LRGVFEEFSNG----------------NTVSNNFLRICYDDAIR 284
           L+ V +   +                  T   NF R+ YD+A++
Sbjct: 245 LKFVTKRILDNCEYELSILGRDPEKLRPTTEGNFARLSYDEAVK 288


>gi|226226853|ref|YP_002760959.1| asparaginyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226090044|dbj|BAH38489.1| asparaginyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 433

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 124/285 (43%), Gaps = 30/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+  +R  G + F  +RD  GI Q V   A    A +E    +  E  + +
Sbjct: 15  VGQTVTVRAWITHLRSKGKLGFAVVRDGTGIMQAVVVKAEVPEAAWEAFGHLTQESSVAL 74

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V + +          G  E+  Q++E++  A  L  P+   +E+        R   L
Sbjct: 75  TGEVRADAR-------APGGFEMGVQQLELIG-ASPLDYPI-QPKEHGVDFLLDNRTFWL 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +  ++     A +F+ C TPILTA+  E A  F      ++G+ Y 
Sbjct: 126 RSPRQVAIMRVRHELEQAVHDFFYARDFVRCDTPILTAAIGERAGLFGT-EYFDEGTAY- 183

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y + L A+   R +   P FR E  ++ R   EF+ ++ EM++ +QDD ++  
Sbjct: 184 LAQTGQLYGEAL-AAAMGRIYTFGPTFRAEKSKTRRHLTEFWMIEPEMAWYDQDDNMDLQ 242

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283
           E  +R + E               + S  + VS  FLR+ Y DA+
Sbjct: 243 EEFVRYLVERVLERRQEELKVLERDTSKLDCVSQPFLRLDYTDAV 287


>gi|309805636|ref|ZP_07699678.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165074|gb|EFO67315.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 433

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 120/284 (42%), Gaps = 34/284 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G I+FL  RD     Q V    N     FE AK++R E  L + G  
Sbjct: 19  VKMHVWLTDKRSSGKIMFLQFRDGTAFFQAVLLKKNVSEELFEQAKNLRQEASLYVTG-- 76

Query: 78  MSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                 TIN +  +    EL     ++++  +  P+   G +E+       +R L LR  
Sbjct: 77  ------TINKDERSHFGYELQISDFQVVTNNDGYPI---GNKEHGIDFLLDHRHLWLRSK 127

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R     ++        FI+   PIL  S+PEG  +       N  ++  L Q
Sbjct: 128 RPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEGTTELFHIEYFNSDAY--LSQ 185

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y ++  A  F + F   P FR E+ ++ R   EF+ ++ EM+++ QD+ L   E +
Sbjct: 186 SGQLYGEV-GAHAFGKIFTFGPTFRAEESKTRRHLTEFWMMEPEMAWMHQDESLEIQEGL 244

Query: 257 LRGVFEEFSNG----------------NTVSNNFLRICYDDAIR 284
           L+ V +   +                  T   NF R+ YD+A++
Sbjct: 245 LKFVTKRILDNCEYELSILGRDHEKLRPTTEGNFARLSYDEAVK 288


>gi|170782886|ref|YP_001711220.1| aspartyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157456|emb|CAQ02645.1| aspartyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 438

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 115/241 (47%), Gaps = 15/241 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V +SGWV  VR    I F+ +RD  G  Q+           A ++     L     + + 
Sbjct: 20  VAVSGWVETVRDQKKIQFVILRDESGAVQLTYKRQGDEDATADTISG---LAAGTFLTAT 76

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELP-LPVFGEREYPESIRFKYRFLDLR--RDT 137
                +  +  G +E+    IE+ + A  +P  P+  +    +  R  +RF+DLR  R++
Sbjct: 77  GTLKHDERVKLGGLEIGLSGIEVAAAA--IPETPIAADSSIDK--RLDWRFIDLRAPRNS 132

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           L   +  +T +++++R   +  +FIE  +P L A+  E   +       +  ++ A  Q+
Sbjct: 133 LIFRV--QTTLVHALRTYWVEHDFIEVFSPKLMATPSESNAELFKVDYFDGVAYLA--QS 188

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMENV 256
           PQ +KQ+  ++GF + F++ P FR +   + R   EF  +D E+S++E  +D+    E +
Sbjct: 189 PQFFKQMAQSAGFGKMFEVGPAFRADPSFTSRHATEFTSVDAEISWIESHEDVARLQEEL 248

Query: 257 L 257
           +
Sbjct: 249 I 249



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 4/79 (5%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+ NG EI +G  R H  +V+       G+  E      G     F+ G+PPHGG   
Sbjct: 353 YDLIWNGVEITTGAQREHRVDVLEAQAREKGLDPE----ELGSYLDFFRYGVPPHGGFGM 408

Query: 542 GIDRIVMLLLGAKNVREVS 560
           G++R++MLLL   N+REV+
Sbjct: 409 GLNRVLMLLLHQSNLREVT 427


>gi|300812409|ref|ZP_07092839.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496576|gb|EFK31668.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 432

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 118/283 (41%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           VR+  W+   R  G I+FL +RD     Q V   +      FE AK +R E    + G +
Sbjct: 18  VRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEASFYLTGTI 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    +E++S  E  P+     +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQISDLEVVSNNEGYPIT---NKEHGIDFLLDHRHLWLRSRR 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R RI  +       E F++  TP+L  S+PEG  +       +  ++  L Q+
Sbjct: 128 PFAIMQIRNRIFKATVDFFENEGFVKFDTPLLMHSAPEGTTELFHIDYFDHDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y ++  A  F + F   P FR E  ++ R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEV-GAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDESLDLQERFL 244

Query: 258 RGV---------FEEFSNGNTVSN-------NFLRICYDDAIR 284
             V         +E    G  +         N+ R+ YDDA++
Sbjct: 245 SYVVGQVLEHCEYELSILGRDLDKLRPAAEGNYTRLSYDDAVK 287


>gi|159042440|ref|YP_001541692.1| asparaginyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157921275|gb|ABW02702.1| asparaginyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 432

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 27/289 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEW 69
           D+  +  GS V + GWV+R R  GG IF+ IRD  G+ Q V + D+ + F+ A+ +  E 
Sbjct: 9   DVAKAGEGSLVNVRGWVYRKRVTGGKIFIVIRDSTGVIQAVVSRDNESVFKKAEQLNIES 68

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L   G V              G  E+    I    V  + P+     +   E +    R
Sbjct: 69  SLIATGYVRKEPRA-------PGGFEIQVTDIPWSFVGWQFPINEDAAKADSEYL-LDMR 120

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L +R   +   +  R+ I  ++     +  + E   P+   S+ EG       +   + 
Sbjct: 121 HLWVRSRRMQAVLKIRSTIFGAIHEWFRSNGYYEVQAPMFITSAVEGGSTLFEVNYFGEK 180

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y + L+ S  ++ + IAP FR E  R+ R   EF+  + E+++   +D+
Sbjct: 181 AY--LTQSSQFYLEALIFS-LEKVYTIAPSFRAEKSRTRRHLTEFWHAEAEVAWAGLEDM 237

Query: 250 LNTMENVLRGVFEEFSNGN---------------TVSNNFLRICYDDAI 283
               EN++  + +     N                V   F R+ YD+AI
Sbjct: 238 FTVTENLISHIVKRVLESNLEDLSLLGRKTEPLENVKPPFPRVPYDEAI 286


>gi|260947816|ref|XP_002618205.1| asparaginyl-tRNA synthetase [Clavispora lusitaniae ATCC 42720]
 gi|238848077|gb|EEQ37541.1| asparaginyl-tRNA synthetase [Clavispora lusitaniae ATCC 42720]
          Length = 552

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 11/250 (4%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           ++ S V + GWVHR+R   G+ F+ +RD  G  Q V + D A   I + +  E  + I G
Sbjct: 125 NINSRVTVQGWVHRLRLQKGVAFITLRDGTGFLQTVLSGDLAKARITQELTLESTVLIKG 184

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLD 132
           ++     +        G +EL A   E++ +A   +E       E   P ++    R L 
Sbjct: 185 VI----EKLPEGKTAPGGVELKADYYEVIGLAPSGDEAFTNKVQENADP-ALLLDQRHLT 239

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +TL      R  ++ SMR     E   E + P +  +  EG           + ++ 
Sbjct: 240 MRGETLSSVFKVRAALLTSMRRFFQEEGLTEVTPPCMVQTQVEGGSTLFKLDYYGEEAY- 298

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  + +  D Y  +   FR E   + R   E+  ++ E++F+  DD+LN 
Sbjct: 299 -LTQSSQLYLETCLPALGDVYC-VQESFRAEKSHTRRHLSEYTHIESELAFLSFDDLLNH 356

Query: 253 MENVLRGVFE 262
           +E +   V +
Sbjct: 357 LEKLFTTVMK 366


>gi|168051607|ref|XP_001778245.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670342|gb|EDQ56912.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 525

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 119/281 (42%), Gaps = 37/281 (13%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           GDLG    G  V + G VH VR  G + FL +R+     Q VA        + ++V S+ 
Sbjct: 68  GDLGQDHSGQTVLVRGRVHTVRGKGSLGFLVVREAGHTVQCVA-------AVKENVVSKG 120

Query: 70  VLCIDGLVMSRS--------AETINANIITGQ-IELSAQKIEILS-VAEELPLPV----- 114
           ++   G +   S                 T Q +EL   KI  +S  A +LP+ +     
Sbjct: 121 MIKYVGKLNKESIVDVEGVVVVPPKPVEGTSQPVELHVSKIYCISKAAVQLPINLEDAAR 180

Query: 115 ------FGERE------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFI 162
                  GE+E        +  R   R +DLR          + ++    R  ++ ENF+
Sbjct: 181 SELDLQKGEQEGIQYVRVGQDTRLNNRVIDLRTPANQAIFRIQCQVSALFRQALLDENFV 240

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
           E  TP L A + EG           Q +   L Q+PQ +KQ+ + + F R F+I P FR 
Sbjct: 241 ELHTPKLIAGASEGGSSVFKLDYKGQPA--CLAQSPQLHKQMAICADFGRVFEIGPVFRA 298

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFE 262
           ED  + R   EF  LD EM   E   ++L+ +E V   +F+
Sbjct: 299 EDSFTHRHLCEFTGLDFEMEIKEHYFEVLDVLEKVFLTIFD 339



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H  E++ +  +  GI  + +         +F+ G PPHGG   
Sbjct: 440 FDVFIRGEEIISGAQRIHDPELLTKRATECGIDVKSLTTYID----SFRYGAPPHGGAGV 495

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML     N+R+ SLFP
Sbjct: 496 GLERVVMLFCALNNIRKTSLFP 517


>gi|309803988|ref|ZP_07698070.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|309807267|ref|ZP_07701237.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|312871781|ref|ZP_07731869.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312873007|ref|ZP_07733067.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312874136|ref|ZP_07734170.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|312875635|ref|ZP_07735636.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|315653550|ref|ZP_07906470.1| asparagine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325912180|ref|ZP_08174578.1| asparagine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325912564|ref|ZP_08174947.1| asparagine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|329920287|ref|ZP_08277071.1| asparagine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|308163907|gb|EFO66172.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308166327|gb|EFO68536.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|311088889|gb|EFQ47332.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311090206|gb|EFQ48616.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311091529|gb|EFQ49913.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092723|gb|EFQ51079.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|315488912|gb|EFU78554.1| asparagine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325476130|gb|EGC79298.1| asparagine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325477985|gb|EGC81114.1| asparagine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|328936332|gb|EGG32780.1| asparagine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 433

 Score = 80.5 bits (197), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 120/284 (42%), Gaps = 34/284 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G I+FL  RD     Q V    N     FE AK++R E  L + G  
Sbjct: 19  VKMHVWLTDKRSSGKIMFLQFRDGTAFFQAVLLKKNVSEELFEQAKNLRQEASLYVTG-- 76

Query: 78  MSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                 TIN +  +    EL     ++++  +  P+   G +E+       +R L LR  
Sbjct: 77  ------TINKDERSHFGYELQISDFQVVTNNDGYPI---GNKEHGIDFLLDHRHLWLRSK 127

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R     ++        FI+   PIL  S+PEG  +       N  ++  L Q
Sbjct: 128 RPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEGTTELFHIEYFNSDAY--LSQ 185

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y ++  A  F + F   P FR E+ ++ R   EF+ ++ EM+++ QD+ L   E +
Sbjct: 186 SGQLYGEV-GAHAFGKIFTFGPTFRAEESKTRRHLTEFWMMEPEMAWMHQDESLEIQEGL 244

Query: 257 LRGVFEEFSNG----------------NTVSNNFLRICYDDAIR 284
           L+ V +   +                  T   NF R+ YD+A++
Sbjct: 245 LKFVTKRILDNCEYELSILGRDPEKLRPTTEGNFARLSYDEAVK 288


>gi|302695385|ref|XP_003037371.1| hypothetical protein SCHCODRAFT_64631 [Schizophyllum commune H4-8]
 gi|300111068|gb|EFJ02469.1| hypothetical protein SCHCODRAFT_64631 [Schizophyllum commune H4-8]
          Length = 544

 Score = 80.5 bits (197), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 122/267 (45%), Gaps = 27/267 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAK---SVRSEWVL 71
           VG  V L   VH  R  G ++FL +R      Q V  A P+     + K    +  E ++
Sbjct: 96  VGETVILRARVHTSRGKGNVVFLVLRQRIDTIQAVLTAKPEKVSKPMVKWASGLSDESIV 155

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV-----------FGERE 119
            ++G+V +      +  I   +I++S  KI +++ ++  LP  +             + +
Sbjct: 156 LVEGVVTAVPTPIQSTTIHNAEIQIS--KIHLIAGLSATLPFTIDDASRSEAELQAADTQ 213

Query: 120 YPESI---RFKYRFLDLRRDTLHKNIVKRTRIINSM-RCRMIAENFIECSTPILTASSPE 175
           Y + +   R   R +DLR  T ++ I K    I S+ R  + A  F E  +P L   + E
Sbjct: 214 YNKVLLDTRLNNRIVDLRTQT-NQAIFKLQAAIGSLFRDYLSARGFTEIHSPKLQGQATE 272

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                   S     +F A  Q+PQ  KQ+ +A+ F+R ++I P FR ED  + R   EF 
Sbjct: 273 SGASVFKVSYFKGNAFLA--QSPQLAKQMCIAADFERVYEIGPVFRAEDSNTHRHLTEFM 330

Query: 236 QLDMEMSFVEQ-DDILNTMENVLRGVF 261
            LD+EM+  E   +++  ++ + + +F
Sbjct: 331 GLDLEMTIEEHYHEVMELLDGLFKSIF 357



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 14/114 (12%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF TMP     +L  +         YD    G EI SG  R H   +++++  
Sbjct: 436 KFPMALRPFYTMPDPNDPTLSNS---------YDFFMRGEEILSGAQRIHDPNLLIESMR 486

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             G++ + +++       +F+ G PPHGG   G++R++ML L   N+R  SLFP
Sbjct: 487 AKGVNPDDMKDYIN----SFRLGCPPHGGGGIGLERVLMLFLKLNNIRRASLFP 536


>gi|321262629|ref|XP_003196033.1| aspartate-tRNA ligase [Cryptococcus gattii WM276]
 gi|317462508|gb|ADV24246.1| aspartate-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 566

 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 126/292 (43%), Gaps = 41/292 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAKS-------VR 66
           VG  V     +H +RP G  I+FL  R      Q  +VA+ +    +++K        + 
Sbjct: 107 VGQRVVFRARLHNMRPQGAKIVFLTFRQQTHTLQGVLVASKEGDEHQVSKQMLKYATLIP 166

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES--- 123
           SE ++ ++G+V  + AE  +  I     E+  QKI       ELP  +  +   PES   
Sbjct: 167 SEAIVLVEGVV--KEAEVKSCTI--QNYEVGIQKIFTAVEVNELPFSI-DDAARPESDFQ 221

Query: 124 ---------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                           R   R +DLR  T       ++ +    R  + +E FIE  +P 
Sbjct: 222 RMETEDVQFARVALPTRLDNRVMDLRTPTNQAIFRIQSAVCQLFREHLNSEGFIEIHSPK 281

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L  ++ E           ++ +F A  Q+PQ  KQ+ +A   +R ++IAP FR ED  + 
Sbjct: 282 LQGAATESGASVFKVKYFDREAFLA--QSPQLAKQMAIAGDMERVYEIAPVFRAEDSNTH 339

Query: 229 RLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF 274
           R   EF  LD+EM+  E      D + N + ++ RG+  +F +   TV   F
Sbjct: 340 RHMTEFMGLDLEMAIEEHYHEAVDVLDNMLIHIFRGLQTKFKHEIETVKKQF 391



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H    +++   +VGI    +     G   AF+ G PPH G   
Sbjct: 481 YDFFMRGEEILSGAQRIHDPTFLVERMKDVGIDPASM----TGYLDAFKLGAPPHAGGGI 536

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML L   N+R  SLFP
Sbjct: 537 GLERVVMLFLKLGNIRRASLFP 558


>gi|291235466|ref|XP_002737659.1| PREDICTED: aspartyl-tRNA synthetase-like [Saccoglossus kowalevskii]
          Length = 532

 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 28/252 (11%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-------YGITQVVANPDSACFEIAK 63
           DL  +     V L   +H  R  G   F+ +R           ++QVV+    A  + A 
Sbjct: 84  DLNSTLAEKRVWLRARIHTSRSKGKQCFVVLRQQSYNVQGLVAVSQVVSK---AMVKFAA 140

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL-------PVF 115
           ++  E ++ ++G+V     E+ +       +E+  +++ ++S +E +LPL       P  
Sbjct: 141 NITKESIVDVEGIVKEAKVESCSQK----DVEILIEQLYVVSASEPQLPLQLDDAVRPAT 196

Query: 116 GEREYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
            + E   ++    R   R +DLR  T          +    R  ++ + F+E  TP +  
Sbjct: 197 EDDESRPTVHQDTRLDNRIIDLRTSTSQAIFRLEASVCQLFREVLMKQGFVEIHTPKMIG 256

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +    S     ++ A  Q+PQ YKQ+++A+ FDR + I   FR ED  + R  
Sbjct: 257 AASEGGANVFTVSYFKTKAYLA--QSPQLYKQMVLAADFDRVWSIGSVFRAEDSNTHRHL 314

Query: 232 GEFYQLDMEMSF 243
            EF  LD+EM+F
Sbjct: 315 TEFIGLDLEMTF 326



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E++++  +  GI  E ++        +F+ G PPH G   
Sbjct: 447 YDMFMRGEEILSGAQRIHDPELLIERATEHGIGIESIKPYID----SFRYGAPPHAGGGI 502

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  N+R+ SLFP
Sbjct: 503 GLERVTMLFLGLDNIRKTSLFP 524


>gi|1495654|emb|CAA61604.1| asparagine--tRNA ligase [Lactobacillus delbrueckii]
 gi|325125875|gb|ADY85205.1| Asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 432

 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           VR+  W+   R  G I+FL +RD     Q V   +      FE AK +R E    + G +
Sbjct: 18  VRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEASFYLTGTI 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    +E++S  E  P+     +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQISDLEVVSNNEGYPIT---NKEHGIDFLLDHRHLWLRSRR 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R RI  +       E F++   P+L  S+PEG  +       N  ++  L Q+
Sbjct: 128 PFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEGTTELFHIDYFNHDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y ++  A  F + F   P FR E  ++ R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEV-GAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDESLDLQERFL 244

Query: 258 RGV---------FEEFSNGNTVSN-------NFLRICYDDAIR 284
             V         +E    G  +         N+ R+ YDDA++
Sbjct: 245 SYVVGQVLEHCEYELSILGRDLDKLRPAAEGNYTRLSYDDAVK 287


>gi|257076916|ref|ZP_05571277.1| asparaginyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 429

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 110/252 (43%), Gaps = 11/252 (4%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V + GWV+R+R  G I F+ +RD  GI Q +A+ ++   E  K + S   L I+  
Sbjct: 13  LGKIVSIRGWVYRIRSSGKITFIVMRDSTGIIQCIASSENLNDEQMKEISS---LTIESS 69

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +            +TG  E+S Q  +I    E  P+     ++  E      R L LR  
Sbjct: 70  IELSGKLRKEPRAVTG-YEISLQSYKIYERNENFPIA----KDLGEEFLLDNRHLWLRSR 124

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R+ +  +       E++ +   P+  +++ EG            G    L Q
Sbjct: 125 EFTAVLKIRSTVFKAFADYFYKEDYYQVQAPMFVSTATEGGSSLFNVDYF--GEKVNLTQ 182

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y + L+ S  ++ F IAP FR E  R+ R   E++  + E ++   +D++   E +
Sbjct: 183 SSQFYLETLIYS-LEKVFTIAPSFRAEKSRTRRHLTEYWHAEGEAAWYSNEDMMADEEKM 241

Query: 257 LRGVFEEFSNGN 268
           ++ + +E    N
Sbjct: 242 IKYIIDEVLKNN 253


>gi|255720006|ref|XP_002556283.1| KLTH0H09394p [Lachancea thermotolerans]
 gi|238942249|emb|CAR30421.1| KLTH0H09394p [Lachancea thermotolerans]
          Length = 601

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 126/295 (42%), Gaps = 35/295 (11%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           DL  +D G  V +   VH  R  G  ++FL +R    + Q +A   +A   I+K +  +W
Sbjct: 143 DLSEADDGKEVLIRARVHNSRQQGATLVFLTLRQQAQLIQALAK-SNAEGTISKQM-VKW 200

Query: 70  VLCIDGLVMS-------------RSAETINANIITGQIEL---SAQKIEIL--------S 105
           +  ++   +              +SA   N  I   QI     + Q++ IL        +
Sbjct: 201 IGSVNPESIVLVKGVVKKVEEPIKSATVQNLEIHITQIHTISEAPQQLPILIEDASRSDA 260

Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
            AE   LPV          R   R +DLR  T       ++ +    R  +    F+E  
Sbjct: 261 EAETAGLPVVNL-----DTRLDARVIDLRTATNQAIFRIQSGVCELFREFLAKRKFVEIH 315

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP L  +  EG  +    +     S+ A  Q+PQ YKQ L+A+ F+R F++AP FR E+ 
Sbjct: 316 TPKLLGAPSEGGANVFEVTYFKGKSYLA--QSPQFYKQELIAADFERVFEVAPVFRAENS 373

Query: 226 RSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
            + R   EF  LD+EM+F E  D++++ +  +   +F E           +R  Y
Sbjct: 374 NTHRHMTEFIGLDLEMAFEEHYDEVIDVLSELFVFIFSELKTRYAKEIALVRKQY 428



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H +  + +  S+ G+S E  +        +F  G PPH G   
Sbjct: 514 YDFFMRGEEILSGAQRIHDANFLKERMSHHGLSPE--DPGLKDYVDSFTYGCPPHAGGGI 571

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM  L  KN+R  SLFP
Sbjct: 572 GLERVVMFFLDLKNIRRASLFP 593


>gi|170589884|ref|XP_001899703.1| Aspartyl-tRNA synthetase [Brugia malayi]
 gi|158592829|gb|EDP31425.1| Aspartyl-tRNA synthetase, putative [Brugia malayi]
          Length = 535

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 25/275 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           D+ V+  G  + + G +H  R  G   F+ IR       G+  V         +   ++ 
Sbjct: 81  DVFVNLEGHEIWIRGRLHTSRIKGKTCFIIIRQRMHSIQGMLSVGKEISKQMLKFVGNIS 140

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES-- 123
            E ++ + G+V     E  +      ++E+   ++ ++S AE  LPL +       E   
Sbjct: 141 KESIIDVRGVVKKVEQEITSCT--QKKVEVHITQLFVVSTAEPRLPLQIEDAARIKEEGK 198

Query: 124 -------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                         R   R LDLR  T H     +  +    R  +    F+E  TP + 
Sbjct: 199 STEDSCLSVVNLDTRLDNRVLDLRTQTSHAIFSIQDGVCELFRNTLKKRGFMEIHTPKII 258

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           +++ EG  +    S   + ++  L Q+PQ YKQ+ +A+ FD+ F I   FR ED  + R 
Sbjct: 259 SAASEGGANVFEVSYFKRSAY--LAQSPQLYKQMAIAADFDKVFTIGAVFRAEDSNTHRH 316

Query: 231 PGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEF 264
             EF  LD+EM+F     ++L T+  VL  +F++ 
Sbjct: 317 LTEFVGLDIEMAFKFHYHEVLETIGAVLIDIFKDL 351



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H + ++ +   +  I  E    +      +F+ G PPH G   
Sbjct: 450 YDMFMRGEEILSGAQRIHDASLLTERAKHHQIDLE----KIRAYIDSFKFGCPPHAGGGI 505

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR  SLFP
Sbjct: 506 GLERVTMLFLGLGNVRLASLFP 527


>gi|322491581|emb|CBZ26854.1| putative aspartyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 641

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 121/267 (45%), Gaps = 9/267 (3%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SC + G    G  V +   + R+R  G + FL +R     +           + AKS+  
Sbjct: 124 SCVESGCVREGDEVTVRARLERMRGRGKLAFLHLRQPPLESVQAVCEGKELTKQAKSITP 183

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRF 126
           E ++ + G+V  R A+T   +      EL    + ++S A   LP P + +       R 
Sbjct: 184 ESIVDVTGVV--RRADTPVQSTTCQGWELQVTALHVVSQAGTPLPFP-YHDTNAKLDTRL 240

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            +R +DLR + +       + +  S R  ++A +FIE  TP L  ++ EG  +       
Sbjct: 241 NHRVMDLRTEKMIATSRLVSALGQSFRNELLARDFIEVHTPKLLGAASEGGSNVFRVDYF 300

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE- 245
            + ++ A  Q+PQ +KQ+++     R F++ P FR E+  + R   EF  LD EM   + 
Sbjct: 301 ERKAYLA--QSPQLHKQMMVMGDAMRVFEVGPVFRAENSLTHRHLTEFVGLDGEMVVKDS 358

Query: 246 QDDILNTMENVLRGVFEEFS--NGNTV 270
             ++L+ +E V+  V    +  +GN +
Sbjct: 359 HTEVLDVLEPVMCAVLAHLTQQHGNLI 385



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E++ Q  S   + K  V++       +F+ G  PHGG   
Sbjct: 556 YDMYLRGEEICSGAQRVHQIELLEQRLSAKKVDKVSVKD----YVDSFRYGAWPHGGFGL 611

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RI +  LG  ++R+VSLFP
Sbjct: 612 GLERIALFFLGLSDIRQVSLFP 633


>gi|309809859|ref|ZP_07703709.1| asparagine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308169811|gb|EFO71854.1| asparagine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 433

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 121/288 (42%), Gaps = 34/288 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           V   V++  W+   R  G I+FL  RD     Q V    N     FE AK++R E  L +
Sbjct: 15  VNQEVKMHVWLTDKRSSGKIMFLQFRDGTAFFQAVLLKKNVAEELFEQAKNLRQEASLYV 74

Query: 74  DGLVMSRSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            G        TIN +  +    EL     ++++  +  P+   G +E+       +R L 
Sbjct: 75  TG--------TINKDERSHFGYELQISDFQVVTNNDGYPI---GNKEHGIDFLLDHRHLW 123

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       +  R     ++        FI+   PIL  S+PEG  +       N  ++ 
Sbjct: 124 LRSKRPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEGTTELFHIEYFNSDAY- 182

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y ++  A  F + F   P FR E+ ++ R   EF+ ++ EM+++ QD+ L  
Sbjct: 183 -LSQSGQLYGEV-GAHAFGKIFTFGPTFRAEESKTRRHLTEFWMMEPEMAWMHQDESLEI 240

Query: 253 MENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIR 284
            E +L+ V +   +                  T   NF R+ YD+A++
Sbjct: 241 QEGLLKFVTKRILDNCEYELSILGRDPEKLRPTTEGNFARLSYDEAVK 288


>gi|28378421|ref|NP_785313.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254556629|ref|YP_003063046.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300767363|ref|ZP_07077275.1| asparagine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308180575|ref|YP_003924703.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|38258520|sp|Q88WA8|SYN2_LACPL RecName: Full=Asparaginyl-tRNA synthetase 2; AltName:
           Full=Asparagine--tRNA ligase 2; Short=AsnRS 2
 gi|28271257|emb|CAD64161.1| asparagine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254045556|gb|ACT62349.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300495182|gb|EFK30338.1| asparagine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308046066|gb|ADN98609.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 432

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 104/240 (43%), Gaps = 16/240 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G I FL +RD     Q   V +      FE+AK V+ E  + I G++
Sbjct: 18  VKIGAWLTNKRSSGKIAFLQLRDGSAFFQGVVVKSQVSEEVFELAKEVKQEASMWITGVI 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              S             E+  + I ++  +EE P+     +E+       +R L LR   
Sbjct: 78  HEDSRSKFG-------YEIEVEDIVVVGESEEYPIT---PKEHGVDFLLDHRHLWLRSKR 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +I         E FI+  +PILT S+PEG  +       ++ ++  L Q+
Sbjct: 128 PWAIMNIRNEVIRGTYEFFNQEGFIKMDSPILTGSAPEGTTELFHTEYFDRDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  + + F   P FR E  ++ R   EF+ ++ EM+F+ Q+  L   E  +
Sbjct: 186 GQLYAEA-GALAYGKVFTFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEQSLEVQERYI 244


>gi|126459115|ref|YP_001055393.1| lysyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126248836|gb|ABO07927.1| lysyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 482

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 126/287 (43%), Gaps = 26/287 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G+ +R++G V  VR H  ++FLD+ +     Q +A+P     E     R ++V     L
Sbjct: 54  LGAVIRVAGRVTDVRRHPNVVFLDLYEDGARFQAMADPKLPLLE--HIWRGDYVGVEGPL 111

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V ++           G   + A  I +L+ A + PLP +G+ +       +YR + +  D
Sbjct: 112 VKTQR----------GDYAVRATSITLLAKAVQ-PLPEWGKVDRDSPFYMRYRSVAMVLD 160

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
             L   I  R R+I + R  M    F+E  TP+L        AR F          +Y L
Sbjct: 161 LQLRWRIAARARLIQAFREAMWRRGFVEIPTPVLQPIYGGAAARPFTTKVWAIDEEWY-L 219

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ Y +  + +GF + F+I P FR+ED  +   P EF+ L+   ++ +  +I+   E
Sbjct: 220 RISPELYLKRYIIAGFPKVFEIGPQFRNEDIDALHNP-EFWSLEAYQAYADYREIMKLTE 278

Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
            V+            V         S  + RI   DA+R +G + P+
Sbjct: 279 EVVYEAIVAVLGTPVVKYREWSINFSPPWRRITLHDALREFGGEDPE 325



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 26/36 (72%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           GMPP GG+  G+DR+ M++  A+++++V  +P+ + 
Sbjct: 446 GMPPTGGVGIGVDRLAMIITNAESIKDVIPYPIVKR 481


>gi|83815569|ref|YP_445945.1| asparaginyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83756963|gb|ABC45076.1| asparaginyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 544

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 123/292 (42%), Gaps = 30/292 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73
           V   V L GW+H  R  GGI FL +RD  G  Q V   D+     + +A  VR E  L I
Sbjct: 57  VDETVTLKGWLHNQRGSGGIKFLILRDGSGFVQCVVPQDAVDADSWAVADDVRQEAALEI 116

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V +            G  EL    +E +  + + P+     +E+      ++R L L
Sbjct: 117 TGSVSADER-------APGGYELQVDAVERIGESGDYPV---TPKEHGIDFLMEHRHLWL 166

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R ++    +  R RI  ++        F++   PILT ++ EG          +  S Y 
Sbjct: 167 RSESQWAVMRIRNRIETAIHEFFQERGFLQTDAPILTGNAVEGTSTLFDLDYFDDESAY- 225

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-------- 245
           L Q+ Q + +  MA  + + +   P FR E   + R   EF+ ++ EM+F +        
Sbjct: 226 LTQSGQLHGE-AMAMAYGKVYTFGPTFRAEKSATRRHLTEFWMIEPEMAFYDLEMNAQLA 284

Query: 246 QDDILNTMENVLRGVFEEF-------SNGNTVSNNFLRICYDDAIRRYGTDK 290
           +D + + ++ VL    EE        S    V   F RI YD+A+    +D+
Sbjct: 285 EDFVAHIVQAVLEDCEEELEALDRDTSALEQVETPFPRISYDEAVELLRSDE 336


>gi|294507857|ref|YP_003571915.1| Asparaginyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294344185|emb|CBH24963.1| Asparaginyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 520

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 123/292 (42%), Gaps = 30/292 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73
           V   V L GW+H  R  GGI FL +RD  G  Q V   D+     + +A  VR E  L I
Sbjct: 33  VDETVTLKGWLHNQRGSGGIKFLILRDGSGFVQCVVPQDAVDADSWAVADDVRQEAALEI 92

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V +            G  EL    +E +  + + P+     +E+      ++R L L
Sbjct: 93  TGSVSADER-------APGGYELQVDAVERIGESGDYPVT---PKEHGIDFLMEHRHLWL 142

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R ++    +  R RI  ++        F++   PILT ++ EG          +  S Y 
Sbjct: 143 RSESQWAVMRIRNRIETAIHEFFQERGFLQTDAPILTGNAVEGTSTLFDLDYFDDESAY- 201

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-------- 245
           L Q+ Q + +  MA  + + +   P FR E   + R   EF+ ++ EM+F +        
Sbjct: 202 LTQSGQLHGE-AMAMAYGKVYTFGPTFRAEKSATRRHLTEFWMIEPEMAFYDLEMNAQLA 260

Query: 246 QDDILNTMENVLRGVFEEF-------SNGNTVSNNFLRICYDDAIRRYGTDK 290
           +D + + ++ VL    EE        S    V   F RI YD+A+    +D+
Sbjct: 261 EDFVAHIVQAVLEDCEEELEALDRDTSALEQVETPFPRISYDEAVELLRSDE 312


>gi|148271740|ref|YP_001221301.1| aspartyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147829670|emb|CAN00586.1| aspartyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 436

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 114/241 (47%), Gaps = 15/241 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V +SGWV  VR    I F+ +RD  G  Q+           A ++     L     + + 
Sbjct: 18  VAVSGWVETVRDQKKIQFVILRDESGAVQLTYKRQGDEDATADTISG---LAAGTFLTAT 74

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELP-LPVFGEREYPESIRFKYRFLDLR--RDT 137
                +  +  G +E+    IE+   A  +P  P+  +    +  R  +RF+DLR  R++
Sbjct: 75  GTLKHDERVKLGGLEIGLSGIEVAGAA--IPETPIAADSSIDK--RLDWRFIDLRAPRNS 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           L   +  +T +++++R   +  +FIE  +P L A+  E   +       +  ++ A  Q+
Sbjct: 131 LIFRV--QTTLVHALRTYWVEHDFIEVFSPKLMATPSESNAELFKVDYFDGVAYLA--QS 186

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMENV 256
           PQ +KQ+  ++GF + F++ P FR +   + R   EF  +D E+S++E  +D+    E +
Sbjct: 187 PQFFKQMAQSAGFGKMFEVGPAFRADPSFTSRHATEFTSVDAEISWIESHEDVARLQEEL 246

Query: 257 L 257
           +
Sbjct: 247 I 247



 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 4/79 (5%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+ NG EI +G  R H  +V+       G+  E      G     F+ G+PPHGG   
Sbjct: 351 YDLIWNGVEITTGAQREHRVDVLEAQAREKGLDPE----ELGSYLDFFRYGVPPHGGFGM 406

Query: 542 GIDRIVMLLLGAKNVREVS 560
           G++R++MLLL   N+REV+
Sbjct: 407 GLNRVLMLLLHQSNLREVT 425


>gi|319651309|ref|ZP_08005439.1| asparaginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317397089|gb|EFV77797.1| asparaginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 431

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 112/282 (39%), Gaps = 31/282 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +  W+   R  G I FL +RD  G  Q   V A      F+ AKSV  E  + + G +
Sbjct: 17  VTIGAWIANKRSSGKIAFLQLRDGTGFIQGVVVKAEVPEEIFQGAKSVTQESSVYVTGKI 76

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                            E+    +E++  A + P+     +E+        R L LR   
Sbjct: 77  QKDERSPFG-------FEMLVTGLEVIHQAVDYPI---TPKEHGTEFLMDNRHLWLRSRR 126

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            H  +  R  II +       + F +   PILT S+PEG  +       ++ ++  L Q+
Sbjct: 127 QHAVMKIRNEIIRATYEFFNEQGFSKVDPPILTGSAPEGTSELFATKYFDEDAY--LSQS 184

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV- 256
            Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F E DD L   E   
Sbjct: 185 GQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFCEFDDNLKVQEEYV 243

Query: 257 --------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284
                         L+ +  +      ++  F RI YD+AI+
Sbjct: 244 AHIVQSVLKNCSIELKTLGRDTEKLEKITAPFPRITYDEAIK 285


>gi|302388757|ref|YP_003824578.1| lysyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302199385|gb|ADL06955.1| lysyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 490

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 141/309 (45%), Gaps = 30/309 (9%)

Query: 5   RTHSCGDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SAC 58
           RTH+C ++  +     GS   ++G +  +R HG   F DI+D  G  Q+    D      
Sbjct: 36  RTHNCLEIKENFEKLEGSETSIAGRIMAIRGHGKAAFFDIQDEKGRLQIYIKKDHVGDEV 95

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +EI K +    ++ ++G +              G+I + A +I +L+ +   PLP     
Sbjct: 96  YEIFKKLDIGDIIGVEGKIFKTQK---------GEISVMADRITVLAKSLR-PLPEKWHG 145

Query: 119 EYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                 R++ R+LDL  +  + +  V R++II ++R  + +  FIE  TP+LT  +    
Sbjct: 146 LKDVDTRYRQRYLDLIVNPDVRRTFVTRSKIIRAIRNYLDSRGFIEVETPVLTPLAGGAA 205

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + Y + L+  GF++ ++I   FR+E       P EF  
Sbjct: 206 ARPFITHHNALDIDLY-LRIATELYLKRLIVGGFEKVYEIGKDFRNEGISIKHNP-EFTM 263

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY- 286
           +++  ++ +  D++   E+++  V +E      V         +  + R+   +A+++Y 
Sbjct: 264 IELYQAYADYQDMMELTEDMISHVAKEVLGTTKVVYQGEEIDLTPPWTRMTMVEAVKKYA 323

Query: 287 GTDKPDLRN 295
           G D  +L+ 
Sbjct: 324 GVDFNELKT 332



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 449 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVILFP 484


>gi|167761368|ref|ZP_02433495.1| hypothetical protein CLOSCI_03776 [Clostridium scindens ATCC 35704]
 gi|167661034|gb|EDS05164.1| hypothetical protein CLOSCI_03776 [Clostridium scindens ATCC 35704]
          Length = 444

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 26/247 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+++G VH +R  G + F+ +R   G+ Q V    +A F++ K ++    + ++G++
Sbjct: 25  GQTVKVNGAVHAIRNMGTVAFVILRKREGLLQGVYEEGTAKFDL-KDIKEAATIEVEGVL 83

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFK--YRFLDLR 134
                         G IE+  + ++ILS  ++  +P+   + +   S+  K  YR + LR
Sbjct: 84  EENEK-------APGGIEIRMENLKILSQPQDEMMPLAISKWKLNTSLEAKLNYRSISLR 136

Query: 135 RDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
                 NI +R +      +  + R  + ++ F E  TP + A   EG  +       ++
Sbjct: 137 ------NIRERAKFRIQEGLTRAFRDFLYSQGFTEIHTPKIGAKGAEGGANIFKLEYFHR 190

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            +   L Q+PQ YKQ+ M   FDR F+ AP FR E   + R   E+  LD EM +++  +
Sbjct: 191 PA--VLAQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 247

Query: 249 ILNTMEN 255
            +  ME 
Sbjct: 248 DIMAMET 254



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EI +GG R H  E++++     G+S+E +E         F+ GMPPHGG
Sbjct: 356 TLSFDLLFRGMEITTGGQRIHDYEMLVEKIKARGMSQEGMEQYLD----TFKHGMPPHGG 411

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           I  G++R+ M L+G  NVRE +LFP
Sbjct: 412 IGIGLERLTMKLIGEDNVRETTLFP 436


>gi|145590943|ref|YP_001152945.1| lysyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145282711|gb|ABP50293.1| lysyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 486

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 26/287 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G+ +R +G V  VR H  ++F+D+ +     QV+A+P     E     R +++     L
Sbjct: 53  LGATIRTAGRVTDVRRHPNVVFIDLYEDGARFQVMADPKLPVLE--HVWRGDFIGVEGPL 110

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V ++           G   + A  I +L+ A + PLP +G+ +       +YR + +  D
Sbjct: 111 VKTQR----------GDYAVKASSIVLLAKAVQ-PLPEWGKVDRSSPFYMRYRSVAMVLD 159

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
             L   +  R R+I + R  M    F+E  TP+L        AR F          +Y L
Sbjct: 160 LQLRWRVAARARLIQAFREAMWRRGFLEIPTPVLQPIYGGAAARPFTTKIWAIDEEWY-L 218

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ Y +  + +GF + F+I P FR+ED  +   P EF+ L+   ++ +  DI+   E
Sbjct: 219 RISPELYLKRYIIAGFPKVFEIGPQFRNEDIDALHNP-EFWSLEAYQAYADYKDIMRLTE 277

Query: 255 NVL---------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
            V+          GV +        S  + R+   DA+R +    PD
Sbjct: 278 EVVYEAVRAVLGTGVVKYREWSINFSPPWRRVTLHDALREFAGVDPD 324



 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 13/33 (39%), Positives = 25/33 (75%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP GG+  G+DR+ M++  A+++++V  +P+
Sbjct: 445 GMPPTGGVGIGVDRLAMIITNAESIKDVIPYPI 477


>gi|58265840|ref|XP_570076.1| aspartate-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134110272|ref|XP_776192.1| hypothetical protein CNBD0130 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258862|gb|EAL21545.1| hypothetical protein CNBD0130 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226309|gb|AAW42769.1| aspartate-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 567

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 126/292 (43%), Gaps = 41/292 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAKS-------VR 66
           VG  V     +H +RP G  I+FL  R      Q  +V + +S   +++K        + 
Sbjct: 108 VGQRVIFRARLHNMRPQGAKIVFLTFRQQTHTLQGVLVVSKESDEHQVSKQMLKYATLIP 167

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES--- 123
           SE ++ ++G+V  + AE  +  I     E+  QKI       ELP  +  +   PES   
Sbjct: 168 SEAIVLVEGVV--KEAEVKSCTI--QNYEVGIQKIFTAVEVNELPFSI-DDAARPESDFQ 222

Query: 124 ---------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                           R   R +DLR  T       ++ I    R  + +E FIE  +P 
Sbjct: 223 RMETEDVQFARVALPTRLDNRVMDLRTPTNQAIFRIQSAICQLFREYLNSEGFIEIHSPK 282

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L  ++ E           ++ +F A  Q+PQ  KQ+ +A   +R ++IAP FR ED  + 
Sbjct: 283 LQGAATESGASVFKVKYFDREAFLA--QSPQLAKQMAIAGDMERVYEIAPVFRAEDSNTH 340

Query: 229 RLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF 274
           R   EF  LD+EM+  E      D + N + ++ RG+  +F +   TV   F
Sbjct: 341 RHMTEFMGLDLEMAIEEHYHEAVDVLDNMLLHIFRGLQTKFKHEIETVKKQF 392



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 52/114 (45%), Gaps = 14/114 (12%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF TMP     +L  +         YD    G EI SG  R H    +++   
Sbjct: 459 KFPIAIRPFYTMPDPSDPTLSNS---------YDFFMRGEEILSGAQRIHDPTFLVERMK 509

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +VGI    +     G   AF+ G PPH G   G++R+VML L   N+R  SLFP
Sbjct: 510 DVGIDPASM----AGYLDAFKLGAPPHAGGGIGLERVVMLFLKLGNIRRASLFP 559


>gi|154249872|ref|YP_001410697.1| asparaginyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|154153808|gb|ABS61040.1| asparaginyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 432

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 35/289 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCI 73
           +G  + L GWV R R  G I F+++RD  G  QVV          FE A  +R E  L +
Sbjct: 13  IGQDIELRGWVRRKRSSGKITFVEMRDGTGFVQVVIEKSIVGDENFEKADKLRLESSLIV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF--KYRFL 131
            G V S         I+  ++           V  ++P   F  ++   SI +  ++R L
Sbjct: 73  RGKVRSDERAPNGVEILANEV-----------VPVQIPTEDFPIQKPDHSIEYLMEHRHL 121

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR       +  R  +I ++R      +F++  TPI T +  E A +       + G  
Sbjct: 122 WLRAKRQFHILRIRDAVIKAIRKFYWERDFVQVDTPIFTGAIGETAGNLFEVDYFDYGKV 181

Query: 192 YALPQAPQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD-- 248
           Y L Q  Q Y +   MA G  + F + P FR E  ++ R   EF+  + E+++ E +D  
Sbjct: 182 Y-LTQTGQLYLEAACMALG--KVFNLGPTFRAEKSKTRRHLIEFWMNEAEVAYYEHEDNV 238

Query: 249 -------------ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
                        +LN + + L  +  + S    V   F R+ Y +A++
Sbjct: 239 KLQEDLVYYIVQYVLNNVYDDLVAIGRDVSKLEKVQKPFPRMTYTEAVK 287


>gi|10434271|dbj|BAB14197.1| unnamed protein product [Homo sapiens]
          Length = 190

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 47/213 (22%)

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL---GII--NCNCFEFCWIMD 439
           E IR+ ++ Q+ D     AG+  K CS     R   A  L   G++  +   F F W++D
Sbjct: 7   ELIRL-METQEEDVVLLTAGEHNKACSLLGKLRLECADLLETRGVVLRDPTLFSFLWVVD 65

Query: 440 FPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           FP +   EE  ++++ AH+PFT P                                    
Sbjct: 66  FPLFLPKEENPRELESAHHPFTAP------------------------------------ 89

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
           H S++ L         KE V+     L +A   G PPHGGIA G+DR++ L+ G+ ++R+
Sbjct: 90  HPSDIHLLYTEP---KKEDVK-MLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRD 145

Query: 559 VSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           V  FP S    DL+  +P +V  E+L+   +R+
Sbjct: 146 VIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRV 178


>gi|221119490|ref|XP_002155876.1| PREDICTED: similar to aspartyl-tRNA synthetase [Hydra
           magnipapillata]
          Length = 570

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 133/289 (46%), Gaps = 28/289 (9%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRD-HYGITQVVA---NPDSACFEIAK 63
           +  DL        V L   +H  R  G   FL +R   + +  +VA   +      + A 
Sbjct: 119 NVSDLNPLKKNEKVLLRARLHTSRGTGKQCFLMLRQRQFSVQALVAVNEHISKQMVKFAT 178

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPE 122
           ++  E ++ ++G V+    + ++A+     +E+  QKI ++S A+  LPL +  +   PE
Sbjct: 179 NISKESIVDVEGTVVEVEQKILSAS--QEDVEVHIQKIFVVSKADPRLPLQI-EDASRPE 235

Query: 123 S----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILTA 171
           +           +  YR +DLR  T          I    R  + +  F E  TP I++A
Sbjct: 236 NDDSLAHVNQDTKLDYRVIDLRTITNQALYKVEAGICKLFREHLDSRGFTEVHTPKIISA 295

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +S  GA  F V     +G+ Y L Q+PQ YKQ+ +A  FD+ + I   FR ED  + R  
Sbjct: 296 ASEGGANVFKVS--YFKGNAY-LAQSPQLYKQMAIAGDFDKVYTIGSVFRAEDSNTHRHL 352

Query: 232 GEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSNG-NTVSNNF 274
            EF  LD+EM+F +       +I N    + +G+ + +SN  +TV+  F
Sbjct: 353 CEFIGLDIEMAFKDHYHEVIQEIGNLFIAIFKGLRDRYSNEISTVAKQF 401



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E + +   +  I+ + ++        +F+ G  PH G   
Sbjct: 485 YDMFMRGEEILSGAQRIHDPEFLTERAKHHKIAIDDIK----AYIESFKYGCSPHAGGGI 540

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 541 GMERVVMLYLGLGNIRKASMFP 562


>gi|313123830|ref|YP_004034089.1| asparaginyl-tRNA synthetase-like protein 2 [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312280393|gb|ADQ61112.1| asparaginyl-tRNA synthetase-like protein 2 [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 432

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 117/283 (41%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77
           VR+  W+   R  G I+FL +RD     Q V   +      FE AK +R E    + G +
Sbjct: 18  VRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEASFYLTGTI 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    +E++S  E  P+     +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQISDLEVVSNNEGYPIT---NKEHGIDFLLDHRHLWLRSRR 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R RI  +       E F++   PIL  S+PEG  +       +  ++  L Q+
Sbjct: 128 PFAIMQIRNRIFKATVDFFENEGFVKFDAPILMHSAPEGTTELFHIDYFDHDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y ++  A  F + F   P FR E  ++ R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEV-GAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDESLDLQERFL 244

Query: 258 RGV---------FEEFSNGNTVSN-------NFLRICYDDAIR 284
             V         +E    G  +         N+ R+ YDDA++
Sbjct: 245 SYVVGQVLEHCEYELSILGRDLDKLRPAAEGNYTRLSYDDAVK 287


>gi|312215055|emb|CBX95008.1| similar to aspartyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 555

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 126/289 (43%), Gaps = 45/289 (15%)

Query: 26  WVHRVRPHGG-IIFLDIRDHYGITQ-VVANPDSACFEIAK---SVRSEWVLCIDGLVMSR 80
           WV   R     + FL++R +    Q VVA  D    ++ K   ++ +E  L + GLV  R
Sbjct: 102 WVENARVQSAKLAFLNLRQNLNTVQAVVAASDKLSKQMVKFCGNISTESTLVVTGLV-KR 160

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVF---GEREYPE--------------- 122
             E I +  I    E+  QK+ I S AE +PLP+     ER  P                
Sbjct: 161 VKEPIKSATIK-DFEIHVQKLFIESKAE-VPLPLQVEDAERPLPSDAVVEDADKLQEGEE 218

Query: 123 ------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-----NFIECSTPILTA 171
                 + R   R +DLR       I +   +I S  C +  E      F+   TP +  
Sbjct: 219 RPLVSLNTRLNNRTIDLR-----AKINQSIFVIKSGVCALFQEFLSKKGFVLVHTPKILG 273

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +       ++ ++ A  Q+PQ YKQ+L+AS F +  +I P FR E+  + R  
Sbjct: 274 AASEGGANVFELKYFDRPAYLA--QSPQFYKQMLIASRFQKVMEIGPVFRAENSNTARHL 331

Query: 232 GEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
            EF  LD+EM F E   +++  +E+++  +F E +         +R  Y
Sbjct: 332 TEFTGLDLEMEFQENYHEVMGVLEDLMLFIFGELNARYRKETELVRSVY 380



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 44/105 (41%), Gaps = 9/105 (8%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +TMP     SL  +         YD+   G EI SG  R H S ++ +         +  
Sbjct: 452 YTMPSPADPSLSNS---------YDMFMRGQEICSGAQRIHDSSLLAEMMRKHDPPIDPA 502

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                     F+ G PPH G   G++RIV   LG  N+R  SLFP
Sbjct: 503 GAGTKDYVDCFKYGCPPHAGGGFGLERIVQFWLGLPNIRMCSLFP 547


>gi|296413417|ref|XP_002836410.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630228|emb|CAZ80601.1| unnamed protein product [Tuber melanosporum]
          Length = 552

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 138/333 (41%), Gaps = 61/333 (18%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDS------ACFEIAKS 64
           L   D G+ V     +   R  G  + F+ +R      Q V   ++         + A  
Sbjct: 96  LTAEDDGTEVVFRARLQNARAQGAKMCFVVLRQQSDSIQAVLTVNTEGTVSKQMVKWASG 155

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---------- 114
           V  E V+ + G +        +A++    +E+   K  +L+ AE + LP+          
Sbjct: 156 VNLESVVLVHGKIAKTPEPVTSASL--SDVEVQITKFFVLAEAEPM-LPIQFDDASRSLK 212

Query: 115 ---FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIIN--SMRCRMIAE-----NFIEC 164
               G      + R   R +DLR       I+    I N  S  C +  E     NF+E 
Sbjct: 213 EVEAGAATVSLATRLDNRVIDLR-------ILSNQAIFNISSAVCTLFKEYLLKHNFVEV 265

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP L A++ EG  +       N+ ++ A  Q+PQ YKQ+L+A+ F+R F+IAP FR E+
Sbjct: 266 HTPKLIAAASEGGSNVFKVHYFNRDAYLA--QSPQLYKQMLIAADFERVFEIAPVFRAEN 323

Query: 225 PRSDRLPGEFYQLDMEMSFVEQ-DDILNTMEN----VLRGVFEEFSNGNTV--------- 270
            ++ R   EF  LD+EM+F E   +++  +E     +  G+ E F+    +         
Sbjct: 324 SQTHRHMTEFTGLDLEMAFEEHYHEVVEVLEGLFVYIFAGLQERFAKEIAIVRAQYPVEE 383

Query: 271 -----SNNFLRICYDDAI---RRYGTDKPDLRN 295
                    LR+ +   I   R  G + PDL +
Sbjct: 384 FKVPKDGKVLRLTFKQGIAMLREAGHEVPDLED 416



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 6/84 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV--VENRFGGLYRAFQCGMPPHGGI 539
           YD    G EI SG  R H S+ + +  S++GI  E   +E+  G    AF+ G PPH G 
Sbjct: 465 YDFFMRGEEILSGAQRVHNSQFLAERMSSLGIDPEAPGLEDYVG----AFKYGAPPHAGG 520

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             G++R+V L LG  N+R  S FP
Sbjct: 521 GIGLERVVFLWLGLGNIRRASAFP 544


>gi|325283207|ref|YP_004255748.1| Aspartate--tRNA ligase [Deinococcus proteolyticus MRP]
 gi|324315016|gb|ADY26131.1| Aspartate--tRNA ligase [Deinococcus proteolyticus MRP]
          Length = 441

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 21/245 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  VRL G +   R  GG+ F+ +RD  G  Q V   D    ++     S  +L      
Sbjct: 26  GQPVRLRGQILSRRDLGGLQFVTLRDGSGAVQCVG--DGLGLDLPLPESSVEILGTVAPH 83

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYPESIRFKYRFLDLR 134
             R+          G++E+  Q + +L+ A E P PV      R +P+++   +R + +R
Sbjct: 84  PKRA----------GEVEVRMQAMHLLAAAAE-PTPVELPKLSRVHPDTL-LNHRAVTVR 131

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
                  +  +  ++   R  +    F E STP +  +  EG  +        + ++ A 
Sbjct: 132 GLEARAVLRVQAELLAGFRAALGDMGFTEISTPKIVEAGAEGGANLFTVDYFGEPAYLA- 190

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTM 253
            Q+PQ YKQ+ M   F+R F++AP FR E   + R   E+  LD E+ F++ ++D+++  
Sbjct: 191 -QSPQLYKQM-MVGAFERVFEVAPVFRGEQHNTSRHLTEYLSLDAELGFIDSEEDVMDVE 248

Query: 254 ENVLR 258
             VLR
Sbjct: 249 TEVLR 253



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SGG R H  +++ Q+    G++ + +     G    F+ GMPPHGG A 
Sbjct: 356 FDLLLRGLEITSGGQRIHDPQMLAQSIEAYGLNPDSLR----GYSEVFRYGMPPHGGFAI 411

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R+  LLLG  NVR    FP
Sbjct: 412 GAERLTALLLGIGNVRMARAFP 433


>gi|189202702|ref|XP_001937687.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187984786|gb|EDU50274.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 551

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 126/289 (43%), Gaps = 45/289 (15%)

Query: 26  WVHRVRPHGG-IIFLDIRDHYGITQ-VVANPDSACFEIAK---SVRSEWVLCIDGLVMSR 80
           WV   R     + FL++R +    Q VVA  D    ++ K   +V +E  L + G+V  R
Sbjct: 98  WVENARVQSAKLAFLNLRQNLSTIQAVVAASDKLSKQMVKFCGNVSTESTLVVTGIV-KR 156

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVF---GEREYPE--------------- 122
             E I +  IT   E+  QK+ + + AE +PLP+     ER  P                
Sbjct: 157 VKEPIKSASIT-DFEIHIQKLFVEATAE-IPLPLQVSDAERPLPNDAAVEEDEKVEEGSE 214

Query: 123 ------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-----NFIECSTPILTA 171
                 + R   R +DLR       I +   +I S  C +  E      F+   TP +  
Sbjct: 215 RPLVSLNTRLNNRTIDLR-----AKINQAIFVIKSGVCALFQEFLSKKGFVLVHTPKILG 269

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +        + ++ A  Q+PQ YKQ+L+AS F +  +I P FR E+  + R  
Sbjct: 270 AASEGGANVFELKYFGRPAYLA--QSPQFYKQMLIASRFQKVMEIGPVFRAENSNTARHL 327

Query: 232 GEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
            EF  LD+EM F E   +++  +E+++  +F E +         +R  Y
Sbjct: 328 TEFTGLDLEMEFQENYHEVMGVLEDLMLFIFNELNTRYKKETELVRGVY 376



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 9/105 (8%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +TMP     +L  +         YD+   G EI SG  R H S ++           +  
Sbjct: 448 YTMPSPADPALSNS---------YDMFMRGQEICSGAQRIHDSALLADQMRKHDPPIDPA 498

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                     F+ G PPH G   G++RIV   LG  N+R  SLFP
Sbjct: 499 GAGTKDYVDCFKYGCPPHAGGGFGLERIVQFWLGLPNIRMCSLFP 543


>gi|256062285|ref|XP_002570299.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|227294226|emb|CAY19129.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 218

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 5/150 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y++H+CG+L    + S V + GW    R      FL +RD  G  Q+  + +S   +I +
Sbjct: 14  YKSHACGELSTQHINSTVTVCGWPGHCRLSSR--FLVLRDDRGSIQIYCDKNS--LQIPQ 69

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
              SE VL + G V +R  + +N  + TG+IE+ A+ IEI S +  L           E 
Sbjct: 70  -FNSESVLIVTGKVQARPEKDVNKRMPTGEIEIVAESIEIPSHSSPLSFLPKDAANVNEM 128

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
            R KYR++DLR  ++ +NI  R+ II  MR
Sbjct: 129 ERLKYRYIDLRSSSMQRNIRFRSSIILQMR 158


>gi|302387684|ref|YP_003823506.1| aspartyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302198312|gb|ADL05883.1| aspartyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 443

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 112/246 (45%), Gaps = 21/246 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  VR+ G VH +R  G + F+ +R   G+ Q V       F+I+  ++ E  + + G+V
Sbjct: 25  GRTVRMEGSVHTIRDMGEVAFVILRKAEGLVQCVYEEGKTDFDIS-LLKEESAVRVTGVV 83

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                      I    I+L +Q  E L VA         + +   S+  K   L LR  T
Sbjct: 84  SKEERAPYGFEIRLLGIDLLSQPAEALPVA-------ISKWKLNTSLETK---LALRPIT 133

Query: 138 LHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           L +N ++R +      I+   R  + ++NF E  TP + A   EG  +       N+ + 
Sbjct: 134 L-RNPMERAKFRLQEGIVRGFRDFLHSQNFTEIRTPKIVARGAEGGSNVFKLDYFNKKA- 191

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+PQ YKQ  M   +DR F++AP FR E   + R   E+  +D EM +++  + + 
Sbjct: 192 -ELGQSPQFYKQT-MVGVYDRVFEVAPVFRAEKHNTTRHLNEYTSMDFEMGYIDGFEEIM 249

Query: 252 TMENVL 257
            ME  +
Sbjct: 250 EMETAM 255



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G E+ +GG R H  + +L+     G++ E + +        FQ GMPPHGG
Sbjct: 355 TLSFDLLFKGLEVTTGGQRIHDYDTILKKMEARGMNPEDISSYL----MIFQYGMPPHGG 410

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M LL   N+RE +LFP
Sbjct: 411 LGIGLERLTMRLLDEGNIRETTLFP 435


>gi|71400970|ref|XP_803219.1| aspartyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70865990|gb|EAN81773.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 564

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 121/271 (44%), Gaps = 32/271 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V +   V   R  G + F+ +RD     Q +A        +A+ V  E V  I G 
Sbjct: 91  VGKTVTVRARVDTTRKKGKLAFMVLRDGTDSIQAMA-------AVAEDVPKEMVDFI-GQ 142

Query: 77  VMSRSAETINANIITG-----------QIELSAQKIEILSVA-EELPLPV--FGEREYPE 122
           +   S   + A I+ G           +IEL   KI +LS A   LP  +     RE  E
Sbjct: 143 IPCESIVDVEA-IVCGVEQPITSTSQQEIELKVNKIHVLSEALRVLPFTLEDASRRETDE 201

Query: 123 SIRFKY------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            I+  +      R+LDLR    +     ++R+    R  ++  +F+E  +P + A++ EG
Sbjct: 202 GIKINFDTRLGCRWLDLRTPASNAIFKVQSRVGQYFRQFLMDHDFVEIHSPKIIAAASEG 261

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +       N+ ++  L Q+PQ YKQ+ +     R F++ P FR E+  + R   EF  
Sbjct: 262 GANVFKVGYFNRDAY--LAQSPQLYKQMALQGDLKRVFEVGPVFRAENSNTHRHLTEFVG 319

Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
           LD+EM   E   ++L+T E +   +F + + 
Sbjct: 320 LDVEMRINEHYYEVLDTAEELFCYIFAQLAK 350



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI+SG  R H S ++L+   ++G+    +++       +F+ G  PHGG   
Sbjct: 479 YDMFIRGEEISSGAQRIHDSSLLLKRAQSLGVDLSPIKDYVD----SFRLGAWPHGGFGV 534

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  NVR VSLFP
Sbjct: 535 GLERVVMLYLGLCNVRLVSLFP 556


>gi|330920517|ref|XP_003299039.1| hypothetical protein PTT_09950 [Pyrenophora teres f. teres 0-1]
 gi|311327454|gb|EFQ92872.1| hypothetical protein PTT_09950 [Pyrenophora teres f. teres 0-1]
          Length = 551

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 35/284 (12%)

Query: 26  WVHRVRPHGG-IIFLDIRDHYGITQ-VVANPDSACFEIAK---SVRSEWVLCIDGLVMSR 80
           WV   R     + FL++R +    Q VVA  D    ++ K   ++ +E  L + G+V  R
Sbjct: 98  WVENARVQSAKLAFLNLRQNLSTIQAVVAASDKLSKQMVKFCGNISTESTLVVTGIV-KR 156

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVF---GEREYPE--------------- 122
             E I +  IT   E+  QK+  +  + E+PLP+     ER  P                
Sbjct: 157 VKEPIKSASIT-DFEIHIQKL-FVEASAEIPLPLQVSDAERPLPSDAVVEEDEKVEEGAE 214

Query: 123 ------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                 + R   R +DLR        V ++ +    +  +  + F+   TP +  ++ EG
Sbjct: 215 RPLVSLNTRLNNRTIDLRAKINQAIFVIKSGVCALFQEFLSKKGFVLVHTPKILGAASEG 274

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +        + ++ A  Q+PQ YKQ+L+AS F +  +I P FR E+  + R   EF  
Sbjct: 275 GANVFELKYFGRPAYLA--QSPQFYKQMLIASRFQKVMEIGPVFRAENSNTARHLTEFTG 332

Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           LD+EM F E   +++  +E+++  +F E +         +R  Y
Sbjct: 333 LDLEMEFQENYHEVMGVLEDLMLFIFNELNTRYKKETELVRGVY 376



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 9/105 (8%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +TMP     +L  +         YD+   G EI SG  R H S ++           +  
Sbjct: 448 YTMPSPADPALSNS---------YDMFMRGQEICSGAQRIHDSALLADQMRKHDPPIDPA 498

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                     F+ G PPH G   G++RIV   LG  N+R  SLFP
Sbjct: 499 GAGTKDYVDCFKYGCPPHAGGGFGLERIVQFWLGLPNIRMCSLFP 543


>gi|323705368|ref|ZP_08116943.1| asparaginyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535270|gb|EGB25046.1| asparaginyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 431

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 127/286 (44%), Gaps = 32/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANP-DSACFEIAKSVRSEWVLCI 73
           VG  V ++GW++  R  G I FL IRD  G  Q  VV N  D   FE+   +  E  + +
Sbjct: 13  VGEEVTINGWLYNKRSSGKIKFLIIRDGSGFVQGIVVKNEVDENVFELCDKLTQESSISV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLD 132
            G+V                 EL+ + I+++ +A  + P+ +   +E+        R L 
Sbjct: 73  SGIVRKDERSPFG-------FELTVKNIDLIQMAFNDYPISL---KEHGVDFLLDNRHLW 122

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R       +  R  +I S++  +   +F+   +PI+T S+ EG  D        + ++ 
Sbjct: 123 IRTPRQQAILSIRHEVIKSIQEFLNNNDFVRIDSPIITPSTCEGTSDLFQIDYFGENAY- 181

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE------- 245
            L Q  Q Y++   A    + +   P FR E  ++ R   EF+ ++ EM+FV+       
Sbjct: 182 -LSQTGQLYQE-AAAMALGKVYSFGPTFRAEKSKTRRHLNEFWMVEPEMAFVDHYANMEV 239

Query: 246 QDDIL-----NTMENVLRGVFE---EFSNGNTVSNNFLRICYDDAI 283
           Q+ ++     + +EN  R + E   + S    +   F R+ YD+AI
Sbjct: 240 QEKLVEYIVQSVLENCSRELKELGRDLSKLEKIKTPFPRLTYDEAI 285


>gi|157131591|ref|XP_001655895.1| aspartyl-tRNA synthetase [Aedes aegypti]
 gi|108881819|gb|EAT46044.1| aspartyl-tRNA synthetase [Aedes aegypti]
          Length = 534

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 24/272 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSAC----FEIAKSV 65
           DL      S V + G VH  R  G   FL +R      Q V+A  DS       + + S+
Sbjct: 81  DLSTCAKDSLVWVRGRVHTSRAKGKQCFLVLRQQSSTVQCVLAVNDSTVSKQMVKFSGSI 140

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFG-----ERE 119
             E ++ I   V+    E+   +     +EL   +I ++S A+ +LPL +       + +
Sbjct: 141 PRESIIDIKAKVVQ--VESKIESCTEQNLELHVVEIFLVSAAKAQLPLQIEDAARPEKSD 198

Query: 120 YPESIRFKY--------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
            PE+++ +         R LDLR             +    R  +  + F E  TP + +
Sbjct: 199 DPEALKIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDILSNKGFTEIHTPKIIS 258

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +    S   + ++  L Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R  
Sbjct: 259 AASEGGANVFTVSYFKESAY--LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHL 316

Query: 232 GEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262
            EF  LD+EM+F     ++L+T+ N    +F+
Sbjct: 317 TEFVGLDLEMAFKYHYHEVLDTIGNTFTEIFK 348



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++   +  I      ++      AF+ G PPH G   
Sbjct: 449 YDMFMRGEEILSGAQRIHDPEYLVERAKHHAIDI----SKIAAYIEAFRFGCPPHAGGGI 504

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 505 GMERVVMLYLGLDNIRKTSMFP 526


>gi|282855597|ref|ZP_06264912.1| asparagine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282586580|gb|EFB91833.1| asparagine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 435

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 35/290 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVLC 72
            G  V + GW++  R  G I FL +RD  G  Q V      PD   FE AK +  E  L 
Sbjct: 15  TGESVCVKGWMYNKRSSGKIHFLQLRDGSGTVQGVMVKGEVPDGQ-FEAAKGLWLEASLE 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRFL 131
             G+V + S            +EL+   ++IL + +EE P+   G++++        R L
Sbjct: 74  ATGVVRTDSR-------APSGVELTVTDLKILQNPSEEYPI---GKKDHGIDFLLDTRHL 123

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR    +  +  R  II S R       F+   +PILT S  EGA         +Q ++
Sbjct: 124 WLRSSRQNALMKIRNEIIWSWRKFFHDRGFMLMDSPILTGSIGEGADGLFELDYFDQKAY 183

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-------- 243
             L Q  Q Y +   A  F + +   P FR E  ++ R   EF+ L+ EM+F        
Sbjct: 184 --LAQTGQLYAE-AAAMAFGKVYCFGPTFRAEKSKTRRHLTEFWMLEPEMAFYDNKMNMQ 240

Query: 244 VEQDDILNTMENVLRGVFEEFSN--------GNTVSNNFLRICYDDAIRR 285
           +++D +++T++NVL    +E +            V+  F  + Y DA+++
Sbjct: 241 LQEDLVVDTVKNVLAHCEKELAVLERDVEPLEKVVAGPFYHLDYRDAVKK 290


>gi|81428525|ref|YP_395525.1| asparaginyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|123769698|sp|Q38X65|SYN_LACSS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|78610167|emb|CAI55216.1| Asparaginyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 432

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 16/240 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G I FL +RD     Q   V +      F++AK V+ E  + I G++
Sbjct: 18  VKIGVWLTDKRSSGKISFLQLRDGSAFFQGVVVKSQVSEEVFQLAKDVKQESSMWITGVI 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    IE++  + E P+     +E+       +R L LR   
Sbjct: 78  HEDTRSHFG-------YEIEVSNIELIGDSSEYPI---TPKEHGIEFLLDHRHLWLRSKR 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  II +       E F++   PILT S+PEG  +       +  ++  L Q+
Sbjct: 128 PFAIMKIRNEIIRATYEFFNQEGFMKMDPPILTGSAPEGTTELFHIEYFDNDAY--LTQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F+EQD+ L   E  +
Sbjct: 186 GQLYAEA-GAMAFGKVFTFGPVFRAEKSKTRRHLTEFWMIEPEMAFMEQDESLEVQEKYV 244


>gi|237836481|ref|XP_002367538.1| aspartyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211965202|gb|EEB00398.1| aspartyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 773

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 22/267 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA----CFEIAKSVRSEWVLC 72
           VG  V + G +   R  G + FL +R+     Q V +          +   S+  E V+ 
Sbjct: 326 VGKTVWVRGRIQESRGKGSVGFLMLRERQETVQGVLDAKRGNTKDMIKWTMSLPLESVVD 385

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPES-------- 123
           + G V+    E I +    G +EL   KI  +S  A+ELP  +  +   PE         
Sbjct: 386 LQGTVVEPEVE-IQSTSQKG-VELLVTKIFCVSKAAQELPFQL-RDAMRPEDGSEGGIRV 442

Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   R LDLR          ++  +   R  +++ NF+E  +P L   + EG    
Sbjct: 443 NMDTRLDNRILDLRTPVNQAIFRIQSETLQLFREFLLSRNFVELHSPKLIGGASEGGASC 502

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 N+ +   L Q+PQ YKQ+ M + F+R F+I P FR E+  + R   EF  LD+E
Sbjct: 503 FTLKYFNRDA--CLAQSPQLYKQMAMCADFERVFEIGPVFRAENSNTHRHLCEFTGLDLE 560

Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSN 266
           M+F E   ++L+ ++++ + +F+  S 
Sbjct: 561 MTFKEHYSEVLDLLDDLFKFIFKGLSE 587



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD      EI SG  R H ++++ Q     G+    ++        +F+ G  PHGG   
Sbjct: 688 YDFFMRNEEITSGAQRVHDADLLTQRCLECGVPPSSIQTYID----SFRLGTAPHGGAGI 743

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LGAKN+R+VSLFP
Sbjct: 744 GLERVVMLFLGAKNIRQVSLFP 765


>gi|241896120|ref|ZP_04783416.1| asparaginyl-tRNA synthetase [Weissella paramesenteroides ATCC
           33313]
 gi|241870634|gb|EER74385.1| asparaginyl-tRNA synthetase [Weissella paramesenteroides ATCC
           33313]
          Length = 431

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 127/314 (40%), Gaps = 32/314 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCI 73
           VG  VRL  W+   R  G + FL +RD     Q V        EI   AK++  E  + +
Sbjct: 13  VGQEVRLGAWLRNKRGSGKMQFLQLRDGTAFFQGVVVKSVVGEEIFAKAKALSQETSMYL 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +++               E+  + + ++  +E  P+     +E+       +R L L
Sbjct: 73  IGTIVADERSPFG-------YEMQVKDLTVVGSSENYPIT---PKEHGTDFLMDHRHLYL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +I +       E FI+  +P+LT S+PEG  +          ++  
Sbjct: 123 RHIQPFAVLRIRNTLIAATYEFFNKEGFIKIDSPLLTGSAPEGTTELFHTEYFEDDAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +   A  F R F   P FR E  ++ R   EF+ ++ EM+++ Q+D L   
Sbjct: 181 LSQTGQLYAEA-GAMAFGRVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAWMTQEDSLKIQ 239

Query: 254 ENVLRGVFEEFSNGNTVSNNFL----------------RICYDDAIRRYGTDKPDLRNPI 297
           E  +  + +   + N    + L                R+ YDDAI+    +  D++  +
Sbjct: 240 ERYIAYLIQSVLDRNEYELDLLGRDKELLKSYTQLPYPRVSYDDAIKLLQENDFDVKWGV 299

Query: 298 IMHNVTEHFVHSEF 311
              +  E F+ + F
Sbjct: 300 DFGSPEETFLANHF 313


>gi|156841338|ref|XP_001644043.1| hypothetical protein Kpol_1026p33 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114676|gb|EDO16185.1| hypothetical protein Kpol_1026p33 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 445

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 120/282 (42%), Gaps = 30/282 (10%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVA--NPDSACFEI--- 61
              +L  S  G  V     VH  R  G  + FL +R    + Q +   N D +  +    
Sbjct: 96  KLNELTESMDGQTVLFRARVHNTRQQGATLAFLTLRQEGELIQALVRCNKDGSITKKMTK 155

Query: 62  -AKSVRSEWVLCIDGLVMS-----RSAETINANIITGQIELSAQKIEILSV--------- 106
            A S+  E ++ + G V       +SA   N  I   QI   ++  E L +         
Sbjct: 156 WAGSLNLESIVLVRGEVKKVEEPIKSATIQNLEIHITQIHSISETPENLPILLEDASRSD 215

Query: 107 --AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
             AE+  LPV          R   R +DLR  T       ++ +    R  +I + F E 
Sbjct: 216 EQAEKAGLPVVNL-----DTRLDARVIDLRTITNQAIFRIQSGVCQLFREFLINKKFTEV 270

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP L  ++ EG  +    S       Y L Q+PQ +KQ LM + F+R F+IAP FR E+
Sbjct: 271 HTPKLLGAASEGGANVFEVSYFKDAKAY-LAQSPQFHKQQLMVADFERVFEIAPVFRAEN 329

Query: 225 PRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFS 265
             + R   EF  LD+EM+F E   ++++T+  +   +F E +
Sbjct: 330 SNTHRHMTEFTGLDLEMTFEENYHEVMDTLSELFVFIFGELN 371


>gi|226491502|ref|NP_078954.4| probable asparaginyl-tRNA synthetase, mitochondrial precursor [Homo
           sapiens]
 gi|296452944|sp|Q96I59|SYNM_HUMAN RecName: Full=Probable asparaginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS;
           Flags: Precursor
          Length = 477

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 26/256 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVRSEWVLCI 73
           G  +++ GW+  VR    ++FL + D   +   QVVA+   DS       SV       +
Sbjct: 41  GERIKIQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGLDSRELNFGSSVE------V 94

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++   ++  N       +EL A+KI+++   +    P+  +  +P     +Y     
Sbjct: 95  QGQLIKSPSKRQN-------VELKAEKIKVIGNCDAKDFPIKYKERHPLEYLRQYPHFRC 147

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVNQ 188
           R + L   +  R+    ++        F+   TPI+T++  EGA +   L PS   +V +
Sbjct: 148 RTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLKVPE 207

Query: 189 GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            +F+ +P       QL   +M+  F + F   P FR E+ +S R   EFY ++ E+SFV+
Sbjct: 208 ENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVD 267

Query: 246 Q-DDILNTMENVLRGV 260
              D++  +E + +  
Sbjct: 268 SLQDLMQVIEELFKAT 283



 Score = 37.4 bits (85), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  GG+R      + +  +  G++ EV +      RFG +         PH
Sbjct: 393 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 442

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG   G +R +  +LG  N+++V  FP   + C L
Sbjct: 443 GGFGMGFERYLQCILGVDNIKDVIPFPRFPHSCLL 477


>gi|119871889|ref|YP_929896.1| asparaginyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119673297|gb|ABL87553.1| asparaginyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 431

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 122/283 (43%), Gaps = 36/283 (12%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           +V + GWV+R R     +F+ +RD  GI Q+V   D   F+IA+ +  E  + + GL++ 
Sbjct: 20  YVTVRGWVYRKRVLKEKVFVVLRDSTGIIQLVFPRDR--FKIAEELNIESSIVVSGLLVK 77

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPL---PVFGEREYPESIRFKYRFLDLRRD 136
                       G +EL  + I+ + + E  P+    V  + EY   +R     L LR  
Sbjct: 78  EPRAP-------GGVELHVESIDWVYIGEPYPINEDAVTADSEYLLDVRH----LWLRSR 126

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYALP 195
            +   +  R  +  ++        F E   P+   ++ EG        RV+  G    L 
Sbjct: 127 KMQAVLKIRHTVFEALHHYFRKNGFYEVQAPMFITAAVEGGATLF---RVDYFGRPVYLT 183

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD------- 248
           Q+ Q Y + L+ S  ++ + IAP FR E  R+ R   EF+  +MEM++   +D       
Sbjct: 184 QSSQFYLEALIYS-LEKVYTIAPSFRAEPSRTRRHLTEFWHAEMEMAWASMEDAARVGEE 242

Query: 249 -ILNTMENVLRGVFEEFS-------NGNTVSNNFLRICYDDAI 283
            I  T+E VL+   EE                 F R+ YD+AI
Sbjct: 243 VISYTVEKVLQERGEELKLLGRKTEALEKAKPPFYRVSYDEAI 285



 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 15/86 (17%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPHG 537
           L+  G+ E+  GG R + ++ ++      G++ E  +      R+G +         PH 
Sbjct: 347 LLPEGYGEVIGGGERIYDAKELIDKIIRFGLNPEDYQWYIDLRRYGSV---------PHS 397

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G+DR+VM + GA ++R+V  FP
Sbjct: 398 GFGLGVDRLVMWITGADHIRDVVPFP 423


>gi|57234639|ref|YP_181320.1| lysyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|123746105|sp|Q3Z8X9|SYK_DEHE1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|57225087|gb|AAW40144.1| lysyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 498

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 137/284 (48%), Gaps = 32/284 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCIDGLV 77
           +R++G +  +R  G I F+DIRD  G  QV     + D A  E+ K +     +  +G +
Sbjct: 56  LRIAGRIMTLRDMGKISFMDIRDGSGKIQVFCRQNDLDEASIELLKDLDLGDFIGAEGSL 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           M            TG+  L+A KI +LS +       +   +  E  R++ R+LDL  + 
Sbjct: 116 MRTR---------TGEPSLAATKISLLSKSLLPLPEKWHGLQDVEK-RYRQRYLDLISNA 165

Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG----ARDFLVPSRVNQGSFY 192
              +  + R+++I+++R  M ++ F+E  TP+L    PE     AR F+   +     FY
Sbjct: 166 DARQTFLTRSQVISAIRSFMSSKGFLEVETPVL---QPEAGGALARPFITHHQALDCDFY 222

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  A + + + L+  GFDR ++I   FR+E   +   P EF  ++   ++ +  D+++ 
Sbjct: 223 -MRIALELHLKRLIVGGFDRVYEIGRIFRNEGVSTRHNP-EFTMMESYQAYADYKDVMDF 280

Query: 253 MENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
           +E ++  V +E S G TV         +  + R+   DA+++Y 
Sbjct: 281 LEEMVSSVVKEISGGYTVPFGDTTLDFTPPWPRLSMRDAVKQYA 324



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 28/43 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A   GMPP GG+  GIDR+VMLL    ++REV LFP  ++  D
Sbjct: 451 ALAYGMPPTGGLGVGIDRLVMLLTNHDSIREVILFPALKDRED 493


>gi|313123660|ref|YP_004033919.1| asparaginyl-tRNA synthetase-like protein 2 [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312280223|gb|ADQ60942.1| asparaginyl-tRNA synthetase-like protein 2 [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 432

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 117/283 (41%), Gaps = 32/283 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           VR+  W+   R  G I+FL +RD     Q V   +      FE AK +R E    + G +
Sbjct: 18  VRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEASFYLTGTI 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    +E++S  E  P+     +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQISDLEVVSNNEGYPIT---NKEHGIDFLLDHRHLWLRSRR 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R RI  +       E F++   P+L  S+PEG  +       +  ++  L Q+
Sbjct: 128 PFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEGTTELFHIDYFDHDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y ++  A  F + F   P FR E  ++ R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEV-GAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDESLDLQERFL 244

Query: 258 RGV---------FEEFSNGNTVSN-------NFLRICYDDAIR 284
             V         +E    G  +         N+ R+ YDDA++
Sbjct: 245 SYVVGQVLEHCEYELSILGRDLDKLRPAAEGNYTRLSYDDAVK 287


>gi|157129543|ref|XP_001661717.1| aspartyl-tRNA synthetase [Aedes aegypti]
 gi|108872172|gb|EAT36397.1| aspartyl-tRNA synthetase [Aedes aegypti]
          Length = 534

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 24/272 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSAC----FEIAKSV 65
           DL      + V + G VH  R  G   FL +R      Q V+A  DS       + + S+
Sbjct: 81  DLSTCSKDALVWVRGRVHTSRAKGKQCFLVLRQQSSTVQCVLAVNDSTVSKQMVKFSGSI 140

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFG-----ERE 119
             E ++ I   V+    E+   +     +EL   +I ++S A+ +LPL +       + +
Sbjct: 141 PRESIIDIKAKVVQ--VESKIESCTEQNLELHVVEIFLVSAAKAQLPLQIEDAARPEKSD 198

Query: 120 YPESIRFKY--------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
            PE+++ +         R LDLR             +    R  +  + F E  TP + +
Sbjct: 199 DPEALKIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDILSNKGFTEIHTPKIIS 258

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +    S   + ++  L Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R  
Sbjct: 259 AASEGGANVFTVSYFKESAY--LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHL 316

Query: 232 GEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262
            EF  LD+EM+F     ++L+T+ N    +F+
Sbjct: 317 TEFVGLDLEMAFKYHYHEVLDTIGNTFTEIFK 348



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++   +  I      ++      AF+ G PPH G   
Sbjct: 449 YDMFMRGEEILSGAQRIHDPEYLVERAKHHAIDI----SKIAAYIEAFRFGCPPHAGGGI 504

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 505 GMERVVMLYLGLDNIRKTSMFP 526


>gi|149235760|ref|XP_001523758.1| asparaginyl-tRNA synthetase [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452737|gb|EDK46993.1| asparaginyl-tRNA synthetase [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 549

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 111/247 (44%), Gaps = 11/247 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +V S V + GW+HR+R   G+ F+ +RD  G  Q V   D A     + +  E  + I
Sbjct: 120 LENVDSRVLVQGWIHRLRVQKGLAFITLRDGTGFLQCVLTGDLAKARQTQELTIESTVAI 179

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRF 130
            G V+S+  E   A    G +EL A   +IL +A   E+       E   P S+    R 
Sbjct: 180 KG-VISKLPEGKTA---PGGVELKADYYKILGLAPGGEDAFTNKIQEGADP-SLLLDQRH 234

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR ++L   +  R   + S+R   + E  +E + P +  +  EG           + +
Sbjct: 235 LTLRGESLSAVMKVRAAFLKSIRRVYVEEGLLEVTPPCMVQTQVEGGSTLFKMDYYGEEA 294

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +  + +  D Y  +   FR E   + R   E+  ++ E+ F+  DD+L
Sbjct: 295 F--LTQSSQLYLETCLPALGDVYC-VQESFRAEKSHTRRHLSEYTHIEAELGFLSFDDLL 351

Query: 251 NTMENVL 257
             +E V+
Sbjct: 352 KHIETVI 358


>gi|221484039|gb|EEE22343.1| aspartyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 763

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 22/267 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA----CFEIAKSVRSEWVLC 72
           VG  V + G +   R  G + FL +R+     Q V +          +   S+  E V+ 
Sbjct: 316 VGKTVWVRGRIQESRGKGSVGFLMLRERQETVQGVLDAKRGNTKDMIKWTMSLPLESVVD 375

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPES-------- 123
           + G V+    E I +    G +EL   KI  +S  A+ELP  +  +   PE         
Sbjct: 376 LQGTVVEPEVE-IQSTSQKG-VELLVTKIFCVSKAAQELPFQL-RDAMRPEDGSEGGIRV 432

Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   R LDLR          ++  +   R  +++ NF+E  +P L   + EG    
Sbjct: 433 NMDTRLDNRILDLRTPVNQAIFRIQSETLQLFREFLLSRNFVELHSPKLIGGASEGGASC 492

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 N+ +   L Q+PQ YKQ+ M + F+R F+I P FR E+  + R   EF  LD+E
Sbjct: 493 FTLKYFNRDA--CLAQSPQLYKQMAMCADFERVFEIGPVFRAENSNTHRHLCEFTGLDLE 550

Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSN 266
           M+F E   ++L+ ++++ + +F+  S 
Sbjct: 551 MTFKEHYSEVLDLLDDLFKFIFKGLSE 577



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD      EI SG  R H ++++ Q     G+    ++        +F+ G  PHGG   
Sbjct: 678 YDFFMRNEEITSGAQRVHDADLLTQRCLECGVPPSSIQTYID----SFRLGTAPHGGAGI 733

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LGAKN+R+VSLFP
Sbjct: 734 GLERVVMLFLGAKNIRQVSLFP 755


>gi|322823627|gb|EFZ29340.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 564

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 121/271 (44%), Gaps = 32/271 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V +   V   R  G + F+ +RD     Q +A        +A+ V  E V  I G 
Sbjct: 91  VGKTVTVRARVDTTRKKGKLAFMVLRDGTDSIQAMA-------AVAEDVPKEMVDFI-GQ 142

Query: 77  VMSRSAETINANIITG-----------QIELSAQKIEILSVA-EELPLPV--FGEREYPE 122
           +   S   + A I+ G           +IEL   KI +LS A   LP  +     RE  E
Sbjct: 143 IPCESIVDVEA-IVCGVEQPITSTSQQEIELKVNKIHVLSEALRVLPFTLEDASRRETDE 201

Query: 123 SIRFKY------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            I+  +      R+LDLR    +     ++R+    R  ++  +F+E  +P + A++ EG
Sbjct: 202 GIKINFDTRLGCRWLDLRTPASNAIFKVQSRVGQYFRQFLMDHDFVEIHSPKIIAAASEG 261

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +       N+ ++  L Q+PQ YKQ+ +     R F++ P FR E+  + R   EF  
Sbjct: 262 GANVFKVGYFNRDAY--LAQSPQLYKQMALQGDLKRVFEVGPVFRAENSNTHRHLTEFVG 319

Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
           LD+EM   E   ++L+T E +   +F + + 
Sbjct: 320 LDVEMRINEHYYEVLDTAEELFCYMFAQLAK 350



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI+SG  R H S ++L+   ++G+    +++       +F+ G  PHGG   
Sbjct: 479 YDMFIRGEEISSGAQRIHDSSLLLKRARSLGVDLSPIKDYVD----SFRLGAWPHGGFGV 534

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  NVR VSLFP
Sbjct: 535 GLERVVMLYLGLSNVRLVSLFP 556


>gi|39644781|gb|AAH07800.2| Asparaginyl-tRNA synthetase 2, mitochondrial (putative) [Homo
           sapiens]
 gi|119595469|gb|EAW75063.1| asparaginyl-tRNA synthetase 2 (mitochondrial)(putative), isoform
           CRA_c [Homo sapiens]
          Length = 477

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 26/256 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVRSEWVLCI 73
           G  +++ GW+  VR    ++FL + D   +   QVVA+   DS       SV       +
Sbjct: 41  GERIKIQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGLDSRELTFGSSVE------V 94

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++   ++  N       +EL A+KI+++   +    P+  +  +P     +Y     
Sbjct: 95  QGQLIKSPSKRQN-------VELKAEKIKVIGNCDAKDFPIKYKERHPLEYLRQYPHFRC 147

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVNQ 188
           R + L   +  R+    ++        F+   TPI+T++  EGA +   L PS   +V +
Sbjct: 148 RTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLKVPE 207

Query: 189 GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            +F+ +P       QL   +M+  F + F   P FR E+ +S R   EFY ++ E+SFV+
Sbjct: 208 ENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVD 267

Query: 246 Q-DDILNTMENVLRGV 260
              D++  +E + +  
Sbjct: 268 SLQDLMQVIEELFKAT 283



 Score = 37.4 bits (85), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  GG+R      + +  +  G++ EV +      RFG +         PH
Sbjct: 393 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 442

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG   G +R +  +LG  N+++V  FP   + C L
Sbjct: 443 GGFGMGFERYLQCILGVDNIKDVIPFPRFPHSCLL 477


>gi|291563445|emb|CBL42261.1| aspartyl-tRNA synthetase, archaeal type [butyrate-producing
           bacterium SS3/4]
          Length = 443

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 108/248 (43%), Gaps = 23/248 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG+ V + G VH +R  G I F+ +R   G+ Q V    S   E+   +R    + + G 
Sbjct: 24  VGTEVTVEGMVHSIRDMGEISFVILRSRDGLLQTVIQAGSEK-EVLSEIREGQAVRVTGT 82

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRR 135
           V                IE+      ILS  EE P+P+  ++ + P S+         RR
Sbjct: 83  VFKEERAPHG-------IEIHLADARILSKPEE-PMPIAIDKWKLPTSLEANLN----RR 130

Query: 136 DTLHKNIVKRTRI-INSMRCR-----MIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
               +N+ +R +  I    CR     M ++ F E  TP + A S EG  +       ++ 
Sbjct: 131 AIALRNVRERAKFRIQEGICRGFREFMTSQGFTEIHTPKIGAKSAEGGANLFKLQYFHRP 190

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +   L Q+PQ YKQ+ M   FDR F+  P FR E   + R   E+  LD EM F++    
Sbjct: 191 A--VLAQSPQFYKQM-MVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGFIDSFMD 247

Query: 250 LNTMENVL 257
           +  ME  +
Sbjct: 248 ICKMETAM 255



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EI +GG R H  E +L+  +  G+  E +E+        F+ GMPPHGG
Sbjct: 355 TLSFDLLFRGLEITTGGQRIHDYETLLKKIAEKGMDIEGMEDYLD----CFKYGMPPHGG 410

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M ++G  NVRE  LFP
Sbjct: 411 LGIGLERLTMKMIGEDNVREACLFP 435


>gi|221505309|gb|EEE30963.1| aspartyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 763

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 22/267 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA----CFEIAKSVRSEWVLC 72
           VG  V + G +   R  G + FL +R+     Q V +          +   S+  E V+ 
Sbjct: 316 VGKTVWVRGRIQESRGKGSVGFLMLRERQETVQGVLDAKRGNTKDMIKWTMSLPLESVVD 375

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPES-------- 123
           + G V+    E I +    G +EL   KI  +S  A+ELP  +  +   PE         
Sbjct: 376 LQGTVVEPEVE-IQSTSQKG-VELLVTKIFCVSKAAQELPFQL-RDAMRPEDGSEGGIRV 432

Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   R LDLR          ++  +   R  +++ NF+E  +P L   + EG    
Sbjct: 433 NMDTRLDNRILDLRTPVNQAIFRIQSETLQLFREFLLSRNFVELHSPKLIGGASEGGASC 492

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 N+ +   L Q+PQ YKQ+ M + F+R F+I P FR E+  + R   EF  LD+E
Sbjct: 493 FTLKYFNRDA--CLAQSPQLYKQMAMCADFERVFEIGPVFRAENSNTHRHLCEFTGLDLE 550

Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSN 266
           M+F E   ++L+ ++++ + +F+  S 
Sbjct: 551 MTFKEHYSEVLDLLDDLFKFIFKGLSE 577



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD      EI SG  R H ++++ Q     G+    ++        +F+ G  PHGG   
Sbjct: 678 YDFFMRNEEITSGAQRVHDADLLTQRCLECGVPPSSIQTYID----SFRLGTAPHGGAGI 733

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LGAKN+R+VSLFP
Sbjct: 734 GLERVVMLFLGAKNIRQVSLFP 755


>gi|182420117|ref|ZP_02951351.1| lysyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669572|ref|ZP_04529552.1| lysine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376154|gb|EDT73741.1| lysyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655016|gb|EEP52576.1| lysine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 501

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 139/303 (45%), Gaps = 35/303 (11%)

Query: 5   RTHSCGDLGVSD-----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           RTH+ G+  V D      G  V ++G +   R  G ++F DI D  G  Q+    D    
Sbjct: 44  RTHTTGE--VRDNYEELEGKEVTIAGRIMSKRGQGKVVFSDIHDKDGKMQLFLKIDKVGE 101

Query: 60  EIAKSVRS----EWVLCIDGLVMSRSAE-TINANIITGQIELSAQKIEILSVAEELPLPV 114
           E  K  ++    +WV     +  ++  E +IN N      EL+ + ++        PLP 
Sbjct: 102 ENLKEYKTYDIGDWVAATGEVFTTQRGEISINVN----SFELTCKSLK--------PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASS 173
                    +R++ R LD+  ++  K+  VKR+RII++MR  +    F+E  TPIL+  +
Sbjct: 150 KWHGLKDPDLRYRQRELDIITNSEVKDTFVKRSRIISAMREFLDNRGFLEVETPILSPIA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    V           L  AP+ Y + L+ +GF++ ++I   FR+E   S R   E
Sbjct: 210 GGAAAKPFVTHHNTLDMDMFLRIAPELYLKRLIVAGFEKVYEIGRNFRNEG-MSVRHNPE 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-----NFL----RICYDDAIR 284
           F  +++  ++ + +D++   EN++  V E+ +    V+      +F+    RI   DA++
Sbjct: 269 FTAIELYEAYSDYNDMMEITENMVAYVCEKINGTTKVTYQGTEIDFMPPWRRITMVDAVK 328

Query: 285 RYG 287
            Y 
Sbjct: 329 EYA 331



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M L  + ++R+V LFP
Sbjct: 460 ALETGMPPTGGLGIGIDRLIMFLTDSASIRDVILFP 495


>gi|238060362|ref|ZP_04605071.1| aspartyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237882173|gb|EEP71001.1| aspartyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 428

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 32/298 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           + VG+ VR++GWVHR R    + FL +RD  G+ QVVA   +A   + +      V    
Sbjct: 11  AHVGATVRIAGWVHRRRLLKSVAFLIVRDAAGLAQVVATDPAARAAVEELTEETVVEVTA 70

Query: 75  GLVMSRSAET----INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            +V + +A T    I+  +       +A   ++   A    LP   +   P ++R   R 
Sbjct: 71  TVVANPAAPTGVELIHPTVRPLGPPAAAPPFDLYRPALTATLPTQLDHA-PVALRHPLRS 129

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
             LR              +   R  + A +F+E  TP + ASS E   +        + +
Sbjct: 130 AALRVSAA---------AVAGFRATLDARHFVEIHTPKVVASSTESGANVFALDWFGRPA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDI 249
           + A  Q+PQ YKQ LM   F+R +++ P FR E   + R   ++  LD E+ FV +  D+
Sbjct: 181 YLA--QSPQFYKQ-LMVGVFERVYEVGPVFRAEPHDTARHLAQYTSLDAELGFVGDHTDV 237

Query: 250 LNTMENVLRGVFEEFSN---------GNTVSNNFLRIC---YDDAIRRYG--TDKPDL 293
           +  + + L G+    ++         G TV     RI    + +A+   G   D+PDL
Sbjct: 238 MVVLRDTLAGMLATVADRAGAALATLGVTVPPVPARIPAVRFTEALAIAGAPADEPDL 295



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G E+ +GG R H  +  L A +  G   E V     G   AF+ GMPPHGG A 
Sbjct: 343 FDLLFGGLELVTGGQRLHRYDDYLAALAARGEPVEPV----AGYVDAFRHGMPPHGGFAI 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R V  L+GA NVREV+ FP
Sbjct: 399 GLERFVARLVGAANVREVTAFP 420


>gi|332211189|ref|XP_003254702.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           isoform 1 [Nomascus leucogenys]
          Length = 477

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 26/257 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVRSEWVLC 72
            G  +++ GW+  VR    ++FL + D   +   QVVA+   DS       SV       
Sbjct: 40  TGERIKVQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGLDSRELTFGSSVE------ 93

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G ++   ++  N       +EL A+KI+++   +    P+  +  +P     +Y    
Sbjct: 94  VQGQLIKSPSKRQN-------VELKAEKIKVIGNCDAKNFPIKYKERHPLEYLRQYPHFR 146

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVN 187
            R + L   +  R+    ++        F+   TPI+T++  EGA +   L PS   +++
Sbjct: 147 CRTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLKLS 206

Query: 188 QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           + +F+ +P       QL   +M+  F + F   P FR E+ +S R   EFY ++ E+SFV
Sbjct: 207 EENFFNVPAFLTVSGQLHLEVMSGAFTQVFAFGPTFRAENSQSRRHLAEFYMIEAEISFV 266

Query: 245 EQ-DDILNTMENVLRGV 260
           +   D++  +E + +  
Sbjct: 267 DSLQDLMQVIEKLFKAT 283



 Score = 37.0 bits (84), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 16/95 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  GG+R      + +  +  G++ EV +      RFG +         PH
Sbjct: 393 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 442

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG   G +R +  +LG  N+++V  FP     C L
Sbjct: 443 GGFGMGFERYLQCILGVDNIKDVIPFPRFPRSCVL 477


>gi|156057967|ref|XP_001594907.1| hypothetical protein SS1G_04715 [Sclerotinia sclerotiorum 1980]
 gi|154702500|gb|EDO02239.1| hypothetical protein SS1G_04715 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 530

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 59/120 (49%)

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           G     + A  YDLV NG E+  G  R H +EV      NV    +   + F  L+ A +
Sbjct: 409 GGSTTLVTADHYDLVVNGVELGGGSKRIHSAEVQKFIMKNVLKMSDEKMSDFKHLFEALR 468

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G P H G A G DR V +L G ++VR+V  FP      D ++GSP  ++ EQ    GLR
Sbjct: 469 AGCPTHAGFAIGFDRWVAVLTGRESVRDVIFFPKGNRGEDAMVGSPGMITKEQEETYGLR 528



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 8/75 (10%)

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVF----EEFSNGNTVSNNFLR----ICYDDAIRRYG 287
           ++DMEM + +   ++  ++ +++ V     +E    + V  NF R    + Y++A+ ++G
Sbjct: 208 EIDMEMPWADGRRVMRVVQGLVKQVHRVIQDEQIGADHVQFNFTREIPRVTYEEAMSKHG 267

Query: 288 TDKPDLRNPIIMHNV 302
           +DKPDLR   ++H V
Sbjct: 268 SDKPDLRIVDLIHRV 282


>gi|326914570|ref|XP_003203598.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           [Meleagris gallopavo]
          Length = 477

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 22/249 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V++ GWV  VR    ++FL + D   +   QVVA+P   C ++             G  +
Sbjct: 44  VKVQGWVRSVRSQKEVLFLHVNDGSSLESLQVVADPSLECRDLTF-----------GSAV 92

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               + + +      +EL A+ I ++   + L  P   +  +P     ++  L  R + L
Sbjct: 93  EVQGKLVKSPHKMQDVELQAEAIHVVGPCDTLSFPFKIKERHPLEYVRQFPHLRCRSNAL 152

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR-----VNQGSFYA 193
              +  R+    ++        ++   TPI+T++  EGA +    S+       +  F+ 
Sbjct: 153 GALLRIRSEATAAIHSFFQDNGYVHIHTPIITSNDCEGAGELFQTSQEAKESAEKNHFFN 212

Query: 194 LPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDI 249
           +P       QL    MA  F   F   P FR E+ +S R   EFY ++ E+SF E   DI
Sbjct: 213 VPTFLTVSGQLHLEAMAGAFTHVFTFGPTFRAENSQSRRHLAEFYMVEAELSFTESLQDI 272

Query: 250 LNTMENVLR 258
           +  ME++ +
Sbjct: 273 MQVMEHLFK 281


>gi|229822645|ref|YP_002884171.1| tRNA synthetase class II (D K and N) [Beutenbergia cavernae DSM
           12333]
 gi|229568558|gb|ACQ82409.1| tRNA synthetase class II (D K and N) [Beutenbergia cavernae DSM
           12333]
          Length = 437

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 128/312 (41%), Gaps = 50/312 (16%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
             +L  +  G  V L G VHR R    + FL +RD  G+ QVV  PD     +      E
Sbjct: 13  AAELAAASPGGVVTLRGHVHRRRELARVTFLVVRDRSGLAQVVIRPDDGVPAVPP---EE 69

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP------------LPVFG 116
             + + G+       T NA    G +E++   I  LS A   P            LPV  
Sbjct: 70  TPVEVTGVA------TANAQ-APGGVEITTPTITALSDAAATPPVELWRPKLDASLPVLL 122

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           E     ++ +++  +  R +    +       +   R  + A  F E  +P L A++ E 
Sbjct: 123 EN---AAVAWRHPVMRARWEIAAAS-------LKGFRSYLDARAFTEVRSPKLVATATES 172

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +        + ++ A  Q+PQ YKQ L+   F+R +++ P FR E   + R   E+  
Sbjct: 173 GANVFGVDYFGRPAYLA--QSPQFYKQQLVGV-FERVYEVGPVFRAEPHDTVRHLAEYTS 229

Query: 237 LDMEMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLR------------ICYDDAI 283
           LD+E+ F+E   D+L  +   L  + +   +  + +   L             I + +A+
Sbjct: 230 LDVELGFIEGHRDVLAVLRGALASMVDAVRSTASDAVELLGLTLPAIPAEVPVIHFAEAL 289

Query: 284 RRYGT--DKPDL 293
            R G   D+PDL
Sbjct: 290 ARVGAAPDEPDL 301



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 48/83 (57%), Gaps = 4/83 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +DL+  G E+ +GG R H     L A    G  +E  E R      AF+ GMPPHGG A
Sbjct: 351 SFDLIFRGVELVTGGQRLHRHADYLTAIRARG--EEPSEYRH--YLSAFEHGMPPHGGFA 406

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            G++R V  L+GA NVREV+LFP
Sbjct: 407 IGLERWVSRLVGAANVREVTLFP 429


>gi|224043707|ref|XP_002190256.1| PREDICTED: similar to asparaginyl-tRNA synthetase 2, mitochondrial
           (putative) [Taeniopygia guttata]
          Length = 473

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 24/262 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69
           LG  +    VR+ GWV  VR    ++FL I D   +   QVVA+P     ++      E 
Sbjct: 29  LGAREAAEAVRVQGWVRSVRSQKEVLFLHINDGSSLESLQVVADPSLETRDLTFGSAVE- 87

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              + G ++       N       +EL A+ I ++   +    P+  +  +P     ++ 
Sbjct: 88  ---VQGKLVKSPHRMQN-------MELQAETIHVVGPCDIWSFPLKMKERHPLEYVRQFP 137

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPSRVN 187
            L  R +TL   +  R+     +        ++   TPI+T++  EGA +   +  SR  
Sbjct: 138 HLRCRNNTLGALLRIRSEATAGIHSFFQDNGYVHIHTPIITSNDCEGAGELFQIETSREA 197

Query: 188 QGS-----FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           + S     F+ +P       QL   +MA  F   F   P FR E+ +S R   EFY ++ 
Sbjct: 198 KESAENTHFFNVPAFLTVSGQLHLEVMAGAFTHVFTFGPTFRAENSQSRRHLAEFYMVEA 257

Query: 240 EMSFVEQ-DDILNTMENVLRGV 260
           E+SF E   DI+  ME++ + V
Sbjct: 258 ELSFTENLQDIMQVMEDLFKTV 279


>gi|116004531|ref|NP_001070623.1| probable asparaginyl-tRNA synthetase, mitochondrial [Danio rerio]
 gi|115313081|gb|AAI24278.1| Zgc:153218 [Danio rerio]
          Length = 485

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 24/268 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69
           L   + GS VR+ GWV  VRP    +FL + D   +   QVVA+      ++      + 
Sbjct: 42  LACKETGSDVRIQGWVRSVRPQKDNLFLHLNDGSSLQPLQVVASSQLNTRDLTFGCAVD- 100

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G +     +  N       +EL AQ I+++     +  P   +  +P     ++ 
Sbjct: 101 ---ITGTLEKSPNKRQN-------VELQAQSIKVVGECNPMDFPFKIKERHPLEYIRQFP 150

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPSRVN 187
            L  R +     +  R+    +++       +++  TP++T++  EGA +   + P+   
Sbjct: 151 HLRCRTNAFSSMLRIRSEATAAIQSFFRDHGYVQIHTPVITSNDCEGAGELFQVEPTGDK 210

Query: 188 QGS----FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           + S    F+++P       QL   +MA  F   +   P FR E+ +S R   EFY ++ E
Sbjct: 211 KDSDDPHFFSVPAYLTVSGQLHLEVMAGAFSAVYTFGPTFRAENSQSRRHLAEFYMVEAE 270

Query: 241 MSFVEQ-DDILNTMENVLRGVFEE-FSN 266
           ++F E  DD++  ME++ +   E  FSN
Sbjct: 271 IAFTESLDDLMKVMEDLFKAATEHVFSN 298



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  E+  G +R    +++ Q  S  G+     E+ +    +  + G  PHGG   
Sbjct: 401 DLLVPGVGELCGGSLREERLQLLTQRLSQAGL-----EDTYAWYLQLREFGSVPHGGFGM 455

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R +  +LG  N+++   F    + C L
Sbjct: 456 GFERYLQCILGLNNIKDAIPFARFSHSCQL 485


>gi|124505695|ref|XP_001350961.1| aspartyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
 gi|23510604|emb|CAD48989.1| aspartyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
          Length = 626

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 32/265 (12%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-----AKSVRSEWVLCIDGLVMS 79
           G +H +R  G I F+ +R      Q + +  +   +        ++  E ++ I G +  
Sbjct: 184 GRIHDIRSKGSIAFIILRHKLYSLQCILDIKNNNNDKNMMKWVSNLSLECIVDIYGEIKK 243

Query: 80  RSAETINANIITGQIELSAQKIEILS-VAEELP--LPVFGEREYPESI--------RFKY 128
                 + NI   + E+   KI  LS   +ELP  L     +E  + I        R   
Sbjct: 244 PEIPIDSTNI---KYEIHINKIFCLSKTMKELPFLLKDANMKETNDEITIKVNQDNRLNN 300

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R  DLR    +     ++ I +  R  ++  NF+E  TP L   S EG  +    +  NQ
Sbjct: 301 RCFDLRTYANYSIFSLQSVICHIFRTFLLQHNFVEIHTPKLLGESSEGGANAFKINYFNQ 360

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             +  L Q+PQ YKQ+ + SGFD+ F++ P FR E+  + R   E+  LD+EM++     
Sbjct: 361 NGY--LAQSPQLYKQMCINSGFDKVFEVGPVFRAENSNTYRHLCEYVSLDIEMTYK---- 414

Query: 249 ILNTMENV------LRGVFEEFSNG 267
             + MENV       + +F+E +N 
Sbjct: 415 -FDYMENVHFYDSMFKHIFKELTNN 438



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R    +++L+      +      N+      +F     PH G   
Sbjct: 541 YDFFMRGEEILSGSQRISDMKLLLENIKLFNLDP----NKLNFYIDSFAYSSYPHSGCGI 596

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++ML LG  N+R+ SLFP
Sbjct: 597 GLERVLMLFLGLNNIRKTSLFP 618


>gi|169595242|ref|XP_001791045.1| hypothetical protein SNOG_00355 [Phaeosphaeria nodorum SN15]
 gi|111070730|gb|EAT91850.1| hypothetical protein SNOG_00355 [Phaeosphaeria nodorum SN15]
          Length = 551

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 123/281 (43%), Gaps = 32/281 (11%)

Query: 26  WVHRVRPHGG-IIFLDIRDHYGITQ-VVANPDSACFEIAK---SVRSEWVLCIDGLVMSR 80
           WV   R     + FL++R      Q VVA  +    ++ K   SV +E  L + GLV  R
Sbjct: 101 WVENARVQSAKLAFLNLRQGLNTVQAVVAASEKLSKQMVKYCGSVSTESTLLVTGLV-KR 159

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVF---GEREYPES-------------- 123
             E I +  I    E+  QK+  + V  ++PLP+     ER  P +              
Sbjct: 160 VKEPIKSASIK-DFEIHVQKL-FIEVKADVPLPLQVEDAERPLPTTEEEQQQEEGDKQPL 217

Query: 124 ----IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   R +DLR        V ++ +    +  +  + F+   TP +  ++ EG  +
Sbjct: 218 VSLNTRLNNRTIDLRAKINQSIFVIKSGVCAIFQEFLSKKGFVLVHTPKILGAASEGGAN 277

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  ++ ++ A  Q+PQ YKQ+L+AS F +  +I P FR E+  + R   EF  LD+
Sbjct: 278 VFELKYFDRPAYLA--QSPQFYKQMLIASRFQKVMEIGPVFRAENSNTARHLTEFTGLDL 335

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           EM F E   +++  +E+++  +F E +         +R  Y
Sbjct: 336 EMEFQENYHEVIRVLEDLMLFIFTELNARYKKETELVRGVY 376



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 38/82 (46%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H S+++           +            F+ G PPHGG   
Sbjct: 462 YDMFMRGQEICSGAQRIHDSKLLASQMRKHDPPIDPESAGTKDYVDCFRFGCPPHGGGGF 521

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV   LG  N+R  SLFP
Sbjct: 522 GLERIVQFWLGLPNIRMCSLFP 543


>gi|302528981|ref|ZP_07281323.1| aspartyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302437876|gb|EFL09692.1| aspartyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 420

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 28/248 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VGS V ++GWVHR R    + FL +RD  G  Q       A F     V  E V+ + G 
Sbjct: 20  VGSTVTIAGWVHRRRVLKSVAFLVVRDRTGTAQ-------AVFAEPPEVAEETVVRLTGQ 72

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLD--- 132
           V++      N     G +EL    +E+LS  E + P P++     PE        LD   
Sbjct: 73  VVA------NPQAPQG-VELREPVLEVLSAPEKQPPFPLY----RPEVAAGLPVVLDNAA 121

Query: 133 --LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
             LR   L +        + + R  +  + F E  TP + A++ E   +        + +
Sbjct: 122 VALRHPVLRRRFEVAAASVAAFRRALDGQGFTEIHTPKIVATATESGANVFQLDYFGRPA 181

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDI 249
           + A  Q+PQ +KQ  M   F+R +++ P FR E   + R   ++  LD E+ F+ +  D+
Sbjct: 182 YLA--QSPQFFKQ-AMVGVFERVYEVGPVFRAEPHDTARHLAQYTSLDAELGFIADHRDV 238

Query: 250 LNTMENVL 257
           +  + +V+
Sbjct: 239 MTVLRDVV 246



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 54/129 (41%), Gaps = 25/129 (19%)

Query: 444 EWNEEEKKIDF--------AHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
           EW E E   +F        A  PF T P     +         ++  +DL+  G E+ +G
Sbjct: 300 EWAEREHGSEFLFVTGYPMAKRPFYTHPDPADPA---------RSHSFDLLFRGLELVTG 350

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           G R H     L               ++     AF  GMPPHGG A G++R V  +LG  
Sbjct: 351 GQRLHRHADYLAVLGEAA-------AQYSDYLDAFAYGMPPHGGFAIGLERWVARVLGVA 403

Query: 555 NVREVSLFP 563
           NVR  +LFP
Sbjct: 404 NVRGATLFP 412


>gi|302828810|ref|XP_002945972.1| hypothetical protein VOLCADRAFT_72624 [Volvox carteri f.
           nagariensis]
 gi|300268787|gb|EFJ52967.1| hypothetical protein VOLCADRAFT_72624 [Volvox carteri f.
           nagariensis]
          Length = 545

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 111/275 (40%), Gaps = 39/275 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF-----EIAKSVRSEWVLCIDG 75
           V +   VH  R  G   FL +R      Q V   D         + A  +  E ++ ++G
Sbjct: 100 VLVRARVHTTRGKGKSAFLVLRQRTATVQAVLFADDVTVSKGMVKYATQIPKESIVDLEG 159

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELP----------------------LP 113
           +V  +  E          +EL    I  +S A  LP                      LP
Sbjct: 160 VV--KVPEKPIEGCSQKDVELQVTGIRTVSRAATLPFELVDASRSEEEVKAAAERGEILP 217

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G+      +R   RFLDLR          ++ +    +  ++AE F E  TP L A +
Sbjct: 218 TVGQ-----DLRLDNRFLDLRTPANQAIFRVQSAVCQIFKNTLLAEGFQEIHTPKLIAGA 272

Query: 174 PEGARDFLVPSRVN-QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
            EG        R++  G    L Q+PQ YKQ+ + + FDR F++ P FR E   + R   
Sbjct: 273 SEGGAAVF---RLDYMGVPACLAQSPQLYKQMAICADFDRVFEVGPVFRAEFSYTHRHLC 329

Query: 233 EFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSN 266
           EF  LD+EM+  E   ++L+ +E +   +F+  S 
Sbjct: 330 EFMGLDLEMAIHEHYFEVLDVIEKLFAAIFDGLST 364



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H +E++ +  +  GI  + +++       +F+ G PPHGG   
Sbjct: 460 YDVFIRGEEIISGAQRVHDAELLTERATACGIPLDTIQSYID----SFKLGAPPHGGAGV 515

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML  G  N+R+ S+FP
Sbjct: 516 GLERVVMLYCGLNNIRKTSMFP 537


>gi|323339824|ref|ZP_08080093.1| asparagine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323092697|gb|EFZ35300.1| asparagine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 433

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 16/244 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           V   V++  W+   R  G I FL +RD     Q   V +N     F++AK ++ E  + +
Sbjct: 13  VDQKVKIGVWLTNKRSSGKIAFLQLRDGTAYFQGVVVKSNVSEETFKLAKELKQETSMYV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +             E+  + IE++  +E  P+     +E+       +R L L
Sbjct: 73  VGTIHEDTRSHFG-------YEIEIEDIEVVGESENYPIT---PKEHGTDFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +I +       E FI+   PILT S+PEG  +       ++ ++  
Sbjct: 123 RSKRQFAVMKIRNEVIRATYEFFNKEGFIKLDAPILTGSAPEGTTELFHTEYFDKDAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y++   A  + + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L   
Sbjct: 181 LSQSGQLYEEA-GAMAYGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLEIQ 239

Query: 254 ENVL 257
           E  +
Sbjct: 240 ERYI 243


>gi|323141547|ref|ZP_08076432.1| lysine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413959|gb|EFY04793.1| lysine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 656

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 24/277 (8%)

Query: 6   THSCGDLG-----VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           TH   D+      +S+  + V+++G +  +R HG   F+D++D  G  QV    D    E
Sbjct: 50  THRAADIAAQFDELSEKETEVKMAGRIMAIRGHGKTCFMDMQDKTGRIQVYVRKDVIGEE 109

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               ++    L   G  +  +      ++  G++ + A  +E+LS +   PLP       
Sbjct: 110 NYALIK----LMDIGDTVGITGTAFRTHM--GELSIKANSVEMLSKSLR-PLPEKWHGLK 162

Query: 121 PESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSP 174
               R++ R++DL      RDT     VKR++II S+R  + + +F+E  TPIL T +  
Sbjct: 163 DVETRYRQRYVDLIVNPEVRDTF----VKRSQIIRSVREVLDSHDFLEVETPILNTIAGG 218

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+          Y +  AP+ Y + L+  G DR +++   FR+E   +   P EF
Sbjct: 219 AAARPFISYHNALDMQVY-MRIAPELYLKRLIVGGMDRVYEMGRVFRNEGIDNRHNP-EF 276

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
             +++  +F +  D+++  E V+    E+     T++
Sbjct: 277 TSVEIYQAFADYRDMMDLTEEVVVKTAEKVLGTTTIN 313



 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 2/92 (2%)

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           +CNGF   +  I     E  L+         E           A + G+PP GG+  GID
Sbjct: 423 ICNGFTELNDPI--DQKERFLKQVEERANGDEEANMMDEDFVNALEYGLPPTGGLGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
           R+VM L  +  +R+V  FP  +     +   P
Sbjct: 481 RLVMFLTNSSTIRDVLFFPTMKPLGKAVSEKP 512


>gi|226505916|ref|NP_001145746.1| hypothetical protein LOC100279253 [Zea mays]
 gi|219884291|gb|ACL52520.1| unknown [Zea mays]
          Length = 545

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 129/282 (45%), Gaps = 31/282 (10%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ--VVANPDSAC----FEIA 62
           GDL  S  G  V + G +  +RP    + F+ +R      Q  +VA+ D+         A
Sbjct: 86  GDLDDSSAGRSVLIRGSLQAIRPVSKKMAFVVLRQSMSTVQCVLVASADAGVSTQMVRFA 145

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPL--------- 112
            ++  E ++ ++G+V S   E + A   T Q+E+  +KI  ++ A   LP+         
Sbjct: 146 TALSKESIVDVEGVV-SLPKEPLKAT--TQQVEIQVRKIYCINRAIPTLPINLEDAARSE 202

Query: 113 ------PVFGER--EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
                  + GE+     +  R  YR +DLR  +       + ++ N  R  +++++F+  
Sbjct: 203 ADFEKAELAGEKLVRVGQDTRLNYRAIDLRTPSNQAIFRIQCQVENKFREFLLSKDFVGI 262

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP L + S EG     V   +  G    L Q+PQ +KQ+ +  GF+R F++ P FR E+
Sbjct: 263 HTPKLISGSSEGGA--AVFKLLYNGQPACLAQSPQLHKQMALCGGFERVFEVGPVFRAEN 320

Query: 225 PRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFS 265
             + R   EF  LD EM   E   ++ + ++ +   +F+  +
Sbjct: 321 SNTHRHLCEFVGLDAEMEIKEHYFEVCDIIDGLFVSIFKHLT 362



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H  E++ +  +  GI    +          F  G PPHGG   
Sbjct: 460 FDVFIRGEEIISGAQRIHTPELLTKRATECGIDVSTISTYI----EVFSYGAPPHGGFGV 515

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML     N+R+ S+FP
Sbjct: 516 GLERVVMLFCALNNIRKTSMFP 537


>gi|256068784|ref|XP_002570922.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238651759|emb|CAZ38607.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 165

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 5/157 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y++H+CG+L    + S V + GW+   R      FL +RD  G+ Q+  + +S   +I +
Sbjct: 14  YKSHACGELSTQHINSTVTVCGWLEHCRLSSR--FLVLRDDRGLIQICCDKNS--LQIPQ 69

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
              SE VL + G V +R  + +N  + TG+IE+ A+ IEILS +  L             
Sbjct: 70  -FNSESVLRVTGKVQARPEKDVNKRMSTGEIEIVAESIEILSHSSPLSFLPKDAANVNGM 128

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN 160
            R KYR++DLR   + +N+  R+ II   R  +   N
Sbjct: 129 ERLKYRYIDLRSLNMQRNMRFRSSIILQTRSFLCQNN 165


>gi|260950931|ref|XP_002619762.1| hypothetical protein CLUG_00921 [Clavispora lusitaniae ATCC 42720]
 gi|238847334|gb|EEQ36798.1| hypothetical protein CLUG_00921 [Clavispora lusitaniae ATCC 42720]
          Length = 556

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 119/284 (41%), Gaps = 40/284 (14%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPDSACFEIAKSVRS 67
           DL  ++ G  V      H  R  G  + FL  R    + Q  + AN  +   ++ K    
Sbjct: 99  DLSAANDGEEVVFRARAHNSRQQGATMAFLTFRQQDSLIQGLIKANGSTVSKQMVK---- 154

Query: 68  EWVLCIDGLVMS-------------RSAETINANIITGQIELSAQKIEILSV-------- 106
            W   I+   +              +SA   +A I+  +I    +  E L +        
Sbjct: 155 -WAGAINLESIVVVTGVVKKVEEPIKSATIQDAEIMISKIYTIQETPEQLPMLIEDAIRS 213

Query: 107 ---AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
              AE   LPV          R   R +DLR  T       +  I    R  + ++ F E
Sbjct: 214 DADAEAAGLPVVNL-----DTRLDARVIDLRTPTNQAIFKIQHGICALFREFLSSKGFTE 268

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             TP +  S+ EG  +    S   + ++  L Q+PQ YKQ L+A+ F++ F++AP FR E
Sbjct: 269 IHTPKILGSASEGGSNVFEVSYFKRSAY--LAQSPQFYKQQLIAADFEKVFEVAPVFRAE 326

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
           +  + R   EF  LD+EM+F E  D+++  +EN+   +F E  N
Sbjct: 327 NSNTHRHMTEFVGLDLEMAFEEHYDEVMEVLENLFIFIFTELKN 370



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H  E++ +      +  +   +       AF  G  PH G   
Sbjct: 469 YDFFMRGEEILSGAQRIHDPELLKERMKAHEV--DYTMDGVSDYVDAFTYGCAPHAGGGI 526

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++M  L  KN+R  SLFP
Sbjct: 527 GLERVLMFFLDLKNIRRASLFP 548


>gi|150866122|ref|XP_001385612.2| Asparaginyl-tRNA synthetase, cytoplasmic (Asparagine--tRNA ligase)
           (AsnRS) [Scheffersomyces stipitis CBS 6054]
 gi|149387378|gb|ABN67583.2| Asparaginyl-tRNA synthetase, cytoplasmic (Asparagine--tRNA ligase)
           (AsnRS) [Scheffersomyces stipitis CBS 6054]
          Length = 553

 Score = 77.8 bits (190), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 19/244 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + GWVHR+R   G+ F+ +RD  G  Q V + D A     + +  E  + I G V+S+
Sbjct: 131 VAVQGWVHRLRLQKGVAFITLRDGTGFIQAVLSGDLAKARQTQELTIESTVVIKG-VISK 189

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYPE----SIRFKYRFLDL 133
             E  +A    G +EL A   E++ +A     P   E    + PE    S+    R L L
Sbjct: 190 LPEGKSA---PGGVELKADYYEVVGLA-----PSGDESFTNKAPENSDPSLLLDQRHLTL 241

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +TL   +  R  ++ ++R     E  +E + P +  +  EG           + ++  
Sbjct: 242 RGETLSAVMKVRASLLRAIRRFFAEEGLLEVTPPCMVQTQVEGGSTLFKMDYYGEEAY-- 299

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  + +  D Y  +   FR E   + R   E+  ++ E++F+E DD+L+ +
Sbjct: 300 LTQSSQLYLETCLPALGDVYC-VQESFRAEKSHTRRHLSEYTHIESELAFIEFDDLLSHL 358

Query: 254 ENVL 257
           E ++
Sbjct: 359 ERLI 362


>gi|71746658|ref|XP_822384.1| aspartyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|70832052|gb|EAN77556.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei]
          Length = 541

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 7/259 (2%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G     +  R+ G V   R  G + F+ +R     +  V    +      K +  E ++ 
Sbjct: 41  GALQSAASARVRGRVENFRVRGKLAFIQLRQPPSHSIQVVAAGAEISHKVKELTPESIVD 100

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFL 131
           + G++  +  E    ++     EL A  IE++S  A  LP P+  +    ++ R   R++
Sbjct: 101 VIGVI--KPTERPVTSVSCSNYELHATSIEVVSKAAVPLPFPLHDQNAKLDT-RLNNRYI 157

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           D+R       I   +    S R ++++ +F+E  TP +  ++ EG           + +F
Sbjct: 158 DMRTPLAVAMIRLVSAAAQSFRTQLLSRDFVELHTPKIIGTASEGGSALFSLDYFGRQAF 217

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDIL 250
            A  Q+PQ YKQ+ +     R F+I P FR E   + R   EF  LD E +  E   ++L
Sbjct: 218 LA--QSPQLYKQMAIMGDGMRVFEIGPVFRAEKSLTHRHLTEFTGLDAEFTVDEFYTELL 275

Query: 251 NTMENVLRGVFEEFSNGNT 269
           + +E++L G+  +    N 
Sbjct: 276 DVLESILCGMIWKLQTENA 294



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 14/111 (12%)

Query: 454 FAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            A  PF TMP    E +         A  +D+   G EI SGG R H    ++ +     
Sbjct: 436 LAARPFYTMPHPSEEGV---------ACGFDMYLRGEEICSGGQRIHDVAQLIHSMEQ-- 484

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             + +          +F+ G  PHGG   G++RIV+ LLGA+++R VSLFP
Sbjct: 485 --RRMEAAHMRDYVDSFRYGAWPHGGFGLGLERIVLFLLGARDIRRVSLFP 533


>gi|50409277|ref|XP_456856.1| DEHA2A12100p [Debaryomyces hansenii CBS767]
 gi|49652520|emb|CAG84831.1| DEHA2A12100p [Debaryomyces hansenii]
          Length = 562

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 127/275 (46%), Gaps = 22/275 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVV--ANPDSACFEIAK---S 64
           DL  ++ G  V      H  R  G  + F+ +R    + Q +  AN +S   ++ K   S
Sbjct: 105 DLSAANDGEEVVFRARAHTSRQQGATMAFITLRQQDNLIQALIKANGESISKQMVKWVGS 164

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-GEREYPES 123
           +  E ++ + G+V     E  +A +   ++ ++ +   I+   E+LP+ +    R   E+
Sbjct: 165 INLESIVVVHGVVRKVEEEIKSATVQDAEVHVT-KIYTIVETPEQLPVLIEDATRSEAEA 223

Query: 124 -----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                       R   R +DLR  T       +  +    R  +  + F E  TP + A+
Sbjct: 224 EAAGLPVVNLDTRLDARVIDLRTPTNQAIFKIQAAVCQLFREFLSTKGFTEIHTPKIIAA 283

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
             EG  +    S   +G  Y L Q+PQ YKQ L+A+ F++ +++AP FR E+  + R   
Sbjct: 284 PSEGGSNVFEISYF-KGKAY-LAQSPQLYKQQLIAADFEKVYEVAPVFRAENSNTHRHMT 341

Query: 233 EFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
           EF  LD+EM+F E  D++++ + ++   +F E  N
Sbjct: 342 EFTGLDLEMAFEEHYDEVIDVLSDLFVFIFTELKN 376



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 41/85 (48%), Gaps = 8/85 (9%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---YRAFQCGMPPHGG 538
           YD    G EI SG  R H   V+L+   N       ++    GL     AF  G PPH G
Sbjct: 475 YDFFMRGEEILSGAQRIH-DPVLLKERMNA----HEIDPSVPGLDDYVDAFTYGCPPHAG 529

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
              G++R+VM  L  KN+R  SLFP
Sbjct: 530 GGIGLERVVMFFLDLKNIRRASLFP 554


>gi|70990316|ref|XP_750007.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus fumigatus Af293]
 gi|66847639|gb|EAL87969.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus fumigatus Af293]
 gi|159130487|gb|EDP55600.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus fumigatus A1163]
          Length = 947

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 128/281 (45%), Gaps = 32/281 (11%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDS-----ACFEIAKS 64
           D+  S VG  V  +  +H +R     ++FL  R      Q V +        A  + A+ 
Sbjct: 132 DISSSSVGQEVFFTARLHIIRRMSARLVFLVFRQRLTTFQGVLHEKPGAKSIAMVQWAEH 191

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP----------- 113
           +R   ++ + G+V +     +  +I    +EL  ++I ++ V  E P+P           
Sbjct: 192 LRLGSIVRVRGIVQTPQVPVLGCSI--HDVELDVEQIHLV-VHREEPVPFSVYEAEIRTA 248

Query: 114 ----VFGEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
               V G R + P+  R   R LDLR  T       ++ + N  R  +  + FIE  TP 
Sbjct: 249 EEDKVEGRRSHLPDRTRLNNRILDLRTPTSQSIFRLQSALCNIFRSSLDEQGFIEIHTPK 308

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L  S+ E        +   + +F A  Q+PQ  KQ+ +A+ F+R ++I   FR E+  + 
Sbjct: 309 LQGSATESGASVFQVNYFGRDAFLA--QSPQLAKQMAIAADFERVYEIGAVFRAENSNTH 366

Query: 229 RLPGEFYQLDMEMS----FVEQDDILNT-MENVLRGVFEEF 264
           R   E+  LD+EM+    + E  D+L+  ++N+L+GV+  +
Sbjct: 367 RHLTEYTGLDIEMAIEEHYHEMLDVLDAVIKNMLKGVYGRY 407



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 9/106 (8%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H   ++ ++    GI+ + +E+   G    F+ G PPH G   
Sbjct: 508 FDIFIRGQEIVSGGQRIHDPRMLEESMRRSGINPDTMEDYLEG----FRWGAPPHAGAGV 563

Query: 542 GIDRIVMLLLGAKNVREVSLF---PMS--QNFCDLLMGSPSTVSVE 582
           G++R++MLLL   N+R  SLF   P S       LL+  P + ++E
Sbjct: 564 GLERLLMLLLKLGNIRLASLFHRDPKSFPPKPPALLLRHPESSTIE 609


>gi|134114419|ref|XP_774138.1| hypothetical protein CNBG4380 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256771|gb|EAL19491.1| hypothetical protein CNBG4380 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 884

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 12/262 (4%)

Query: 17  VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEI--AKSVRSEWVLCI 73
            G+ V + G +H+ R     + F+ +R    + Q + +  ++   I   + +  E ++ +
Sbjct: 111 AGTKVNIRGRIHQQRDLSSHLNFILLRQRGLVIQGILSEHASEHMIKWVQHLPGEAIVQV 170

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +    + I A + T  +EL+ +++ ++  + ++P  +      P+S R + R LDL
Sbjct: 171 SG-TLREPPKPITAAVDT-PLELNIERLYLVEASHDIPFNLAHGDRPPQSTRLRNRTLDL 228

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-GARDFLVPSRVNQ-GSF 191
           R  T       R +++   R  +    F+E +TP L  S+ E GA  F    RVN  G  
Sbjct: 229 RHPTAQAIFKIRAKVLKVFRDTLDDLGFLEINTPKLQPSATESGAEVF----RVNYFGRK 284

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDIL 250
             L Q+PQ  KQ+ +++ F R ++I P FR E+  + R   E+  LD+EM+   E  ++ 
Sbjct: 285 AFLAQSPQLMKQMAISADFRRVYEIGPVFRAENSNTHRHLTEYTGLDIEMAIQKEYHEVF 344

Query: 251 NTMENVLRGVFEEFSNGNTVSN 272
             ++ VLR +F       T  N
Sbjct: 345 RILDIVLRNIFNALKEMKTELN 366



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G E+ +GG R +  + + ++    GI+    E+      +AF  GMPPHGG   
Sbjct: 452 FDMFIRGQEVCTGGQRINDPKKLRESMKESGIN----EDEMAEYLQAFDWGMPPHGGAGL 507

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++RIV   L   +VR  +L+
Sbjct: 508 GVERIVTFFLNLPDVRLSTLW 528


>gi|296242398|ref|YP_003649885.1| asparaginyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296094982|gb|ADG90933.1| asparaginyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 432

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 129/283 (45%), Gaps = 27/283 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG    + GW++R    GG  F+ +RD  G+ QVV        E+  S+++   + ++  
Sbjct: 15  VGKEACIRGWIYRRSVVGGKAFVRVRDSTGVIQVVVESSRLGEELVDSLKN---IGLEAS 71

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V++   E        G  EL A+  +I+  + + P+      EY  ++R  +     R  
Sbjct: 72  VIA-CGEVKEEAKAPGGFELQAKFFQIVGDSRDFPIKGGEGDEYLLNMRHLW-IRSPRYA 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +L K  +K T +IN+ R       + E + PILTAS+ EG          +Q +F  L Q
Sbjct: 130 SLFK--IKHT-VINAGREYFSKNGWWEVTPPILTASACEGGATLFPVQYFDQTAF--LSQ 184

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y ++L+ +  ++ + + P FR E  R+ R   E++ L+ E ++ + +D++   E +
Sbjct: 185 SAQLYLEVLIYT-LEKVYSLTPSFRAEKSRTRRHLAEYWHLEPEAAWYDMNDMMKVAEEL 243

Query: 257 LRGV-----------FEEFSNG-----NTVSNNFLRICYDDAI 283
           +  +            EEF          +   + RI YD+AI
Sbjct: 244 VSYIVSKVLDERKRELEEFGRDIGKLRKALEVPYPRIRYDEAI 286


>gi|296811126|ref|XP_002845901.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238843289|gb|EEQ32951.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 946

 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 3/143 (2%)

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           P+  R   R LDLR DT       ++ I N  R  +   NFIE  TP L AS+ E     
Sbjct: 259 PDRTRLSNRILDLRTDTSQSIFRIQSAISNMFRSCLDTHNFIEIHTPKLQASATESGASV 318

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +  ++ +F  L Q+PQ  KQ+ +AS F+R ++I   FR E+  + R   E+  LD+E
Sbjct: 319 FGVNYFSRPAF--LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIE 376

Query: 241 MSFVEQ-DDILNTMENVLRGVFE 262
           M+  E   + L  +++VL+ +F+
Sbjct: 377 MAIEEHYHEALEVLDHVLKSIFK 399



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +D+   G EI SGG R H  E++ +    VGI    +E    G    F+ G PPH G
Sbjct: 503 TLSFDIFVRGQEIVSGGQRIHNPELLEKRMREVGIDPSSMEEYMEG----FKWGAPPHAG 558

Query: 539 IAAGIDRIVMLLLGAKNVREVSLF 562
              G++R++ML+L   N+R  SLF
Sbjct: 559 AGIGLERLLMLILKLGNIRLGSLF 582


>gi|50284857|ref|XP_444856.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524158|emb|CAG57749.1| unnamed protein product [Candida glabrata]
          Length = 548

 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 129/284 (45%), Gaps = 25/284 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V++SGW+HR+R +  ++F+ +RD YG  Q V   D A  + +  +  E  + + G 
Sbjct: 122 VGQRVKISGWIHRLRSNKKVMFIVLRDGYGYLQSVLTGDLAIAQQSLDLTIESTVTLYGT 181

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDL 133
           + ++  E  +A    G +EL     E++ +A   +E       E   P S+    R L L
Sbjct: 182 I-TKVPEGKSA---PGGVELLVDYYEVVGLAPSGDEAFTNKIAEGADP-SLLLDQRHLAL 236

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +TL   +  R  ++ S+R     E+  E + P +  +  EG           + ++  
Sbjct: 237 RGETLSAVMKVRAALMKSIRRVYTEESLTEVTPPCMVQTQVEGGSTLFKLDYYGEQAY-- 294

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  + S  D Y  +   FR E   + R   E+  ++ E++F+  +++L+ +
Sbjct: 295 LTQSSQLYLETCLPSLGDVYC-VQESFRAEKSHTRRHLSEYTHIEAELAFLTFEELLDHI 353

Query: 254 ENVL----RGVFEEFSNGNTVSN----------NFLRICYDDAI 283
           E VL    + + E+   G  V             F+R+ Y DAI
Sbjct: 354 ERVLCKTVQYILEDPIAGPLVKQLNPDFQAPKMPFMRLEYKDAI 397


>gi|209528216|ref|ZP_03276683.1| aspartyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209491338|gb|EDZ91726.1| aspartyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 91

 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 39/82 (47%), Positives = 51/82 (62%)

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
           E   N+F  L  AF+ G PPHGGIA G+DR+VMLL G  ++R+V  FP +Q    LL  +
Sbjct: 8   EEAYNKFRFLLEAFEYGTPPHGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQARCLLTNA 67

Query: 576 PSTVSVEQLRELGLRIVENPKK 597
           PS V  +QL+EL +     PKK
Sbjct: 68  PSGVDQKQLKELQVASTYKPKK 89


>gi|145502188|ref|XP_001437073.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124404220|emb|CAK69676.1| unnamed protein product [Paramecium tetraurelia]
          Length = 579

 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 45/284 (15%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEIAK 63
             GD+  + V   + +   +H  R  G + FL +R++Y   QVVA       +   +   
Sbjct: 108 KVGDVDQTLVNQVILVRARIHNSRVKGKLAFLVLRENYNTIQVVAEKGEFASAQMLKYIS 167

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +  E V+ I+ LV     E ++    T ++EL  + I++  V+  LP+  F   +    
Sbjct: 168 GIPVESVVDIEALVKQPFKEILSC---TQKVELEVRSIQV--VSRSLPMLPFQIEDASRR 222

Query: 124 I---------------------------------RFKYRFLDLRRDTLHKNIVKRTRIIN 150
           I                                 R   R +DLR          ++ I  
Sbjct: 223 ITDFEDGVQEQKQEEPQQKQDKNEKQQIQVMLKTRLDNRVIDLRTPAKQAIFRVQSGIGL 282

Query: 151 SMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF 210
             R  ++   FIE  TP L   + EG  +       NQ +   L Q+PQ YKQ+ + + +
Sbjct: 283 LFREFLVENGFIEIHTPKLIGGTSEGGTNVFKLKYFNQDA--CLAQSPQLYKQMCLMADY 340

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTM 253
           DR F++AP FR E+  + R   EF  +D+EM   E   ++L+ M
Sbjct: 341 DRVFEVAPVFRAENSNTHRHQCEFISMDIEMVIKEHFTELLDLM 384



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H  E++++     GI+ E +++       +F+ G  PHGG A 
Sbjct: 494 YDFFMRGEEIVSGAQRVHDPELLVKQIKEKGIAVEPLKDYID----SFRYGAYPHGGCAF 549

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+  L    KN+    +FP
Sbjct: 550 GLERVAFLYFNLKNISNACMFP 571


>gi|58269164|ref|XP_571738.1| aspartate--tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57227974|gb|AAW44431.1| aspartate--tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 884

 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 12/262 (4%)

Query: 17  VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIA--KSVRSEWVLCI 73
            G+ V + G +H+ R     + F+ +R    + Q + +  ++   I   + +  E ++ +
Sbjct: 111 AGTKVNIRGRIHQQRDLSSHLNFILLRQRGLVIQGILSEHASEHMIKWVQHLPGEAIVQV 170

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +    + I A + T  +EL+ +++ ++  + ++P  +      P+S R + R LDL
Sbjct: 171 SG-TLREPPKPITAAVDT-PLELNIERLYLVEASHDIPFNLAHGDRPPQSTRLRNRTLDL 228

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-GARDFLVPSRVNQ-GSF 191
           R  T       R +++   R  +    F+E +TP L  S+ E GA  F    RVN  G  
Sbjct: 229 RHPTAQAIFKIRAKVLKVFRDTLDDLGFLEINTPKLQPSATESGAEVF----RVNYFGRK 284

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDIL 250
             L Q+PQ  KQ+ +++ F R ++I P FR E+  + R   E+  LD+EM+   E  ++ 
Sbjct: 285 AFLAQSPQLMKQMAISADFRRVYEIGPVFRAENSNTHRHLTEYTGLDIEMAIQKEYHEVF 344

Query: 251 NTMENVLRGVFEEFSNGNTVSN 272
             ++ VLR +F       T  N
Sbjct: 345 RILDIVLRNIFNALKEMKTELN 366



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G E+ +GG R +  + + ++     I+    E+      +AF  GMPPHGG   
Sbjct: 452 FDMFIRGQEVCTGGQRINDPKELRESMKESRIN----EDEMAEYLQAFDWGMPPHGGAGL 507

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++RIV   L   +VR  +L+
Sbjct: 508 GVERIVTFFLNLPDVRLSTLW 528


>gi|302390919|ref|YP_003826739.1| lysyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302202996|gb|ADL11674.1| lysyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 491

 Score = 77.4 bits (189), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 134/282 (47%), Gaps = 28/282 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77
           VRL+G +  VR HG   F DI D  G  Q+ A  D+     +E+  S+     + I+GL+
Sbjct: 56  VRLTGRLMAVREHGKASFADIEDMSGRIQLYAKEDNLGEDLYELFMSLDIGDQIGIEGLL 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                         G++ +  +  E+L+ A   PLP          +R++ R++DL  ++
Sbjct: 116 FKTG---------RGEVTVQIENFELLAKALR-PLPEKWHGLKDVEMRYRQRYVDLIVNS 165

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPIL--TASSPEGARDFLVPSRVNQGSFYAL 194
             +N  V R++II++MR  +  E+F+E  TP++   A   E AR F+          Y L
Sbjct: 166 DVRNTFVLRSKIIHTMREHLEEEDFLEVETPLMHPIAGGAE-ARPFVTHHNALDMDLY-L 223

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF++ F+I    R+E   +   P EF  +++  +  + +D++   E
Sbjct: 224 RIAPELYLKRLIVGGFEKVFEIGKNLRNEGISTKHNP-EFTSMELYQANADYEDMMEITE 282

Query: 255 NVLRGVFEEF-------SNGNTV--SNNFLRICYDDAIRRYG 287
           +V+  + +E         +G  +  S ++ R+   +AI  Y 
Sbjct: 283 SVIVNIAQEVLGTLEIEYDGQEIDLSPSWTRMTMREAINEYA 324



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 449 RALEYGMPPTGGLGIGIDRLVMLLTDSTSIRDVILFP 485


>gi|153856063|ref|ZP_01996954.1| hypothetical protein DORLON_02982 [Dorea longicatena DSM 13814]
 gi|149751725|gb|EDM61656.1| hypothetical protein DORLON_02982 [Dorea longicatena DSM 13814]
          Length = 467

 Score = 77.4 bits (189), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 120/253 (47%), Gaps = 26/253 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L  ++ G+ V+++G VH +R  G + F+ +R   G+ Q V    SA FE+ K ++ E   
Sbjct: 42  LEQAEAGAKVKVNGAVHTIRDMGTVAFVILRKREGLLQCVYEEGSADFEL-KDIK-EAAT 99

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFK--Y 128
                V+  + +  N       IE+  + ++ILS  E+  +P+   + +   S+  K  Y
Sbjct: 100 VEVEGVVEENEKAPNG------IEIRMESVKILSEPEDEMMPLAISKWKLNTSLEAKLNY 153

Query: 129 RFLDLRRDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           R + LR      NI +R +      +  + R  + ++ F E  TP + A   EG  +   
Sbjct: 154 RSISLR------NIRERAKFRIQEGLTRAFRDFLYSQEFTEIHTPKIGAKGAEGGANIFK 207

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
               ++ +   L Q+PQ YKQ+ M   FDR F+ AP FR E   + R   E+  LD EM 
Sbjct: 208 LEYFHRPA--VLAQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMG 264

Query: 243 FVEQDDILNTMEN 255
           +++  + +  ME 
Sbjct: 265 YIDGFEDIMAMET 277



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EI +GG R H  +++    +  G+++E +E         F+ GMPPHGG
Sbjct: 379 TLSFDLLFRGLEITTGGQRIHDYKMLTDKIAARGMTEEGMEQYLA----TFKHGMPPHGG 434

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M LLG  NVRE +LFP
Sbjct: 435 LGIGLERLTMQLLGEDNVRETTLFP 459


>gi|269986157|gb|EEZ92470.1| asparaginyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 427

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 32/283 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  + L+G+++ +R      F  +RD  GI Q V++     FE    +  E  + + G++
Sbjct: 15  GKEIELNGFINNIRKGKNNTFFMLRDPTGIIQCVSHSADKNFEEVNKITRESSVNVTGII 74

Query: 78  M-SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                AE        G  E+S + I++ S+AE  PL    ++ + +   F  R L LR  
Sbjct: 75  KRDERAE--------GGYEISIKDIKVYSIAEPFPL----KKGHKKVFLFDERHLWLRSP 122

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +   +  R+ + +S+        F E   P     S EG       +  N+ ++  L Q
Sbjct: 123 KMTAIMKIRSTVFSSIHEFFSENGFYEIQAPSFVGGSVEGGATLFETNYFNKKAY--LTQ 180

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y + ++ S + + + +AP FR E  R+ R   EF+  + EM+F   +D ++  E +
Sbjct: 181 SWQLYAEAMVNSLW-KIYTVAPSFRAEKSRTWRHLTEFWHAEAEMAFKTNEDAIDLEEKL 239

Query: 257 LRGVFEE--FSN--------------GNTVSNNFLRICYDDAI 283
           ++ V +     N               N V+  FLR+ Y++ I
Sbjct: 240 IKYVVKNVLIKNPDELKLLKRDTTMLENVVNKPFLRMKYEEII 282


>gi|70945583|ref|XP_742595.1| aspartyl-tRNA synthetase [Plasmodium chabaudi chabaudi]
 gi|56521667|emb|CAH75640.1| aspartyl-tRNA synthetase, putative [Plasmodium chabaudi chabaudi]
          Length = 417

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 13/149 (8%)

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R   R +DLR    +     ++ I    R  +I  NF E  TP L   S EG  +    +
Sbjct: 88  RLNNRCIDLRTYANYSIFYLQSEICKIFRNYLIDNNFTEIHTPKLLGESSEGGANAFQIN 147

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             NQ  F  L Q+PQ YKQ+ + SGFDR F+IAP FR E+  + R   E+  LD+EM++ 
Sbjct: 148 YFNQNGF--LAQSPQLYKQMCINSGFDRVFEIAPVFRAENSNTYRHLCEYVSLDVEMTYK 205

Query: 245 EQDDILNTMENV------LRGVFEEFSNG 267
                 + MENV       + +F +  N 
Sbjct: 206 -----FDYMENVYFYDSMFKNIFNKLVNN 229



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R    +V+L       ++ +    +      +F     PH G   
Sbjct: 332 YDFFMRGEEILSGSQRISDVKVLLDNIKKFNLNPK----KLDFYIDSFAYSSYPHSGCGI 387

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++ML LG  N+R+ SLFP
Sbjct: 388 GLERVLMLFLGLNNIRKTSLFP 409


>gi|289739549|gb|ADD18522.1| aspartyl tRNA synthetase [Glossina morsitans morsitans]
          Length = 538

 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 120/275 (43%), Gaps = 25/275 (9%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAK 63
           +  +LG     S + L G VH  R  G   FL +R      Q +     N      + A 
Sbjct: 83  AIANLGQYTGKSAIWLRGRVHTSRAKGKQCFLILRQQSSTVQCILSVGDNTSKQMVKFAG 142

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPE 122
           ++  E ++ I    ++  ++    +     +EL+ Q++ ++S A+ +LPL +  +   P+
Sbjct: 143 NIHKESIVDIQAKAVAVPSKI--ESCTEQNLELAVQQLFVVSQAKAQLPLQI-EDASRPD 199

Query: 123 SI--------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
           ++              R   R LDLR             +    R  +  + F E  TP 
Sbjct: 200 NLDDTDALNTRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPK 259

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           + +++ EG  +    S     ++  L Q+PQ YKQ+ +A+ FD+ F +   FR ED  + 
Sbjct: 260 IISAASEGGANVFTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTH 317

Query: 229 RLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262
           R   EF  LD+EM+F     ++L+T+ +    +F+
Sbjct: 318 RHLTEFVGLDLEMAFKYHYHEVLHTIGDTFTAMFK 352



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H +E + +   + GI      N+      +F+ G PPH G   
Sbjct: 453 YDMFMRGEEILSGAQRIHDAEFLTERAKHHGIDI----NKIAAYIESFRFGCPPHAGGGI 508

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 509 GLERVVMLYLGLDNIRKTSMFP 530


>gi|254577988|ref|XP_002494980.1| ZYRO0B00550p [Zygosaccharomyces rouxii]
 gi|238937870|emb|CAR26047.1| ZYRO0B00550p [Zygosaccharomyces rouxii]
          Length = 554

 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 35/291 (12%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPDSAC----FEIAKSVRS 67
            D G  V     VH  R  G  + FL +R    + Q  V ANPD +      + A S+  
Sbjct: 100 KDDGRHVLFRARVHNTRQQGATLAFLTLRQQSELIQALVKANPDGSVSKNMVKWAGSLNL 159

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF-GEREYPES-- 123
           E ++ + G+V  + AE I +  ++  +E+    + I+S    ELP+ +    R   E+  
Sbjct: 160 ESIVLVRGVV-HKVAEPIKSATVS-HLEVHVTDLHIISETPSELPILLEDASRSEAEAEA 217

Query: 124 ---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-----NFIECSTPIL 169
                     R   R +DLR  TL    + R   I +  C +  E      F E  TP L
Sbjct: 218 AGLPVVNLDTRLDNRVIDLR--TLTNQAIFR---IQAGVCALFREFLSNRKFTEIHTPKL 272

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             ++ EG             ++ A  Q+PQ +KQ L+ + F+R F+I P FR E+  + R
Sbjct: 273 LGAASEGGASVFEVGYFKSKAYLA--QSPQFHKQQLIIADFERVFEIGPVFRAENSNTHR 330

Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
              EF  LD+EM+F E   ++++ + ++   +F E +   T     +R  Y
Sbjct: 331 HMTEFTGLDLEMAFEEHYHEVVDLLSDLFVFIFTELTKRYTKEIELVRKQY 381



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 8/85 (9%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---AFQCGMPPHGG 538
           YD    G EI SG  R H  +++L+     G+S E V     GL     AF+ G  PH G
Sbjct: 467 YDFFVRGEEILSGAQRIHDYDLLLERMKAHGLSSEEV-----GLKDYCDAFKSGCAPHAG 521

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
              G++R+VM  L  KN+R  SLFP
Sbjct: 522 GGIGLERVVMFFLDLKNIRRASLFP 546


>gi|114639524|ref|XP_522122.2| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           isoform 2 [Pan troglodytes]
          Length = 477

 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 116/256 (45%), Gaps = 26/256 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVRSEWVLCI 73
           G  +++ GW+  VR    ++FL + D   +   QVVA+   DS       SV       +
Sbjct: 41  GERIKIQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGLDSRELTFGSSVE------V 94

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++   ++  N       +EL A+KI+++   +    P+  +  +P     ++     
Sbjct: 95  QGQLIKSPSKRQN-------VELKAEKIKVIGNCDAKDFPIKYKERHPLEYLRQHPHFRC 147

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVNQ 188
           R + L   +  R+    ++        F+   TPI+T++  EGA +   L PS   +V +
Sbjct: 148 RTNVLSSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLKVPE 207

Query: 189 GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            +F+ +P       QL   +M+  F + F   P FR E+ +S R   EFY ++ E+SFV+
Sbjct: 208 ENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVD 267

Query: 246 Q-DDILNTMENVLRGV 260
              D++  +E + +  
Sbjct: 268 SLQDLMQVIEELFKAT 283



 Score = 37.0 bits (84), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  GG+R      + +  +  G++ EV +      RFG +         PH
Sbjct: 393 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 442

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG   G +R +  +LG  N+++V  FP   + C L
Sbjct: 443 GGFGMGFERYLQCVLGVDNIKDVIPFPRFPHSCLL 477


>gi|187251209|ref|YP_001875691.1| asparaginyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186971369|gb|ACC98354.1| Asparaginyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 431

 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 35/298 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           +GS V L+GWV+ +R  G + F+ +RD  GI Q V    N     F+ A ++  E  + I
Sbjct: 14  LGSEVTLNGWVYNMRSSGKLHFIQLRDGSGIIQCVIFKGNVTPEVFDTAANLTQETSVSI 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V   +   +         EL  + I+I++ + + P+     +E+ ++     R L L
Sbjct: 74  TGTVKEDNRSKLG-------FELDVKDIKIIAPSVDYPIT---PKEHGDAFLMHNRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  II ++R       F    +PILT ++ EG           + +F  
Sbjct: 124 RSSKQTAILKIRDEIIFAIRKFFHEREFTLVDSPILTPAACEGRSTLFETEYFGEKAF-- 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF--------VE 245
           L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E++F        + 
Sbjct: 182 LSQSGQLYGE-AAAMALGKIYCFGPTFRAEKSKTRRHLTEFWMVEPEVAFNDLNDNMELA 240

Query: 246 QDDILNTMENVLRG-------VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +D I+  +E+VL+        +  + S    +   F R+ Y +AI+       DL NP
Sbjct: 241 EDFIVYIVESVLKNRRAELELIGRDISKLENIKKPFPRVSYTEAIKILN----DLGNP 294


>gi|156849133|ref|XP_001647447.1| hypothetical protein Kpol_1018p126 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118133|gb|EDO19589.1| hypothetical protein Kpol_1018p126 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 554

 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 124/280 (44%), Gaps = 25/280 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V++SGW+HR+R +  ++F+ +RD  G  Q V + D A  +    +  E  + + G ++S 
Sbjct: 132 VKISGWIHRMRSNKKVVFIVLRDGTGYIQTVLSGDLALAQQTLDLTLESTVTLYGTIVS- 190

Query: 81  SAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                      G +EL     E++ +A   +E       E   P S+    R L LR +T
Sbjct: 191 ---VPEGKSAPGGVELVVDYYEVVGLAPSGDEAITNKIAEGADP-SLLLDQRHLALRGET 246

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           L   +  R  ++ ++R   I E+  E + P +  +  EG           + ++  L Q+
Sbjct: 247 LSAVMKVRASLLKAIRRVYIEEDITEVTPPCMVQTQVEGGSTLFKLDYYGEEAY--LTQS 304

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV- 256
            Q Y +  + +  D Y  I   FR E   + R   E+  ++ E++F++ +D+L  +E + 
Sbjct: 305 SQLYLETCLPALGDVYC-IQESFRAEKSHTRRHLSEYTHIEAELAFIDFNDLLQHIETLI 363

Query: 257 ---LRGVFEEFSNGNTVSN----------NFLRICYDDAI 283
              ++ V E+   G  V             F+R+ Y DAI
Sbjct: 364 VKSIQYVLEDPIAGPLVKQLNPGFVAPKGPFMRLEYKDAI 403



 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 12/84 (14%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDR 545
           EI  G +R   +E ++  F+  GI  +     ++ R        + G  PHGG   G +R
Sbjct: 477 EITGGSMRIESTEELMAGFTREGIDSKAYYWFIDQR--------KYGTCPHGGYGLGTER 528

Query: 546 IVMLLLGAKNVREVSLFPMSQNFC 569
           I+  L     VR+ SL+P     C
Sbjct: 529 ILAWLCDRFTVRDCSLYPRFSGRC 552


>gi|239609470|gb|EEQ86457.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 941

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 25/267 (9%)

Query: 17  VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ-VVANPDSAC----FEIAKSVRSEWV 70
           +G  V     VH +R     ++F+ +R      Q V+A    A      + A+ +R   +
Sbjct: 132 IGQEVTFRARVHHIRNMSSKLVFIILRQQITTIQGVLAEKPGAISTLMIQWAEHIRVGSI 191

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--------- 121
           + + G++           I   +I++    + I+   +++P  V+ E E P         
Sbjct: 192 VKVKGVLTKSKVPVTGTTIHDVEIDIQGLHV-IVHRQDQIPFSVY-EAELPSKDVSSDGR 249

Query: 122 -----ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                +  R   R LDLR DT       ++ + N  R  + A+ FIE  TP L +S+ E 
Sbjct: 250 RNHVLDRTRLSNRILDLRTDTSQSIFRIQSAVSNLFRSSLDAQGFIEIHTPKLQSSATES 309

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R   E+  
Sbjct: 310 GASVFEVKYFTREAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTG 367

Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVFE 262
           LD+EM+  E   + L  +++VL+ +F+
Sbjct: 368 LDIEMAIEEHYHEALEIVDSVLKEIFK 394



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H  +++ +   +VGI+   +E    G    F+   PPH G   
Sbjct: 500 FDIFVRGQEIVSGGQRIHDEKILEKRMKDVGINPATMEEYMEG----FRWAAPPHAGAGI 555

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R++ML+L   N+R  SLF
Sbjct: 556 GLERLIMLILKLGNIRLASLF 576


>gi|109108077|ref|XP_001094498.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           [Macaca mulatta]
          Length = 477

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 26/256 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVRSEWVLCI 73
           G  +++ GW+  VR     +FL + D   +   Q+VA+   DS       SV       I
Sbjct: 41  GERIKVQGWIRSVRSQKEFLFLHVNDGSSLESLQIVADSSLDSRELTFGSSVE------I 94

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++   ++  N       +EL A+KI+I+   +    P+  +  +P     +Y     
Sbjct: 95  QGQLVKSPSKRQN-------VELKAEKIKIIGNCDAKAFPIKYKERHPLEYLRQYPHFRC 147

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVNQ 188
           R + L   +  R+    ++        F+   TPI+T++  EGA +   L PS   +V +
Sbjct: 148 RTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLKVPE 207

Query: 189 GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            +F+ +P       QL   +M+  F + F   P FR E+ +S R   EFY ++ E+SFV 
Sbjct: 208 ENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEISFVN 267

Query: 246 Q-DDILNTMENVLRGV 260
              D++  +E + +  
Sbjct: 268 SLQDLMQVIEELFKAT 283



 Score = 37.4 bits (85), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  GG+R      + +  +  G++ EV +      RFG +         PH
Sbjct: 393 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 442

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG   G +R +  +LG  N+++V  FP   + C L
Sbjct: 443 GGFGMGFERYLQCILGVDNIKDVIPFPRFPHSCLL 477


>gi|332638896|ref|ZP_08417759.1| asparaginyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 431

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 126/310 (40%), Gaps = 32/310 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCIDGLV 77
           VRL  W+   R  G + FL +RD     Q V + ++   EI   AK++  E  + + G +
Sbjct: 17  VRLGAWLRNKRGSGKMQFLQLRDGTAFFQGVVSKEAVGEEIFAKAKALTQETSMYLIGTI 76

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                            E+  + + ++  ++  P+     +E+       +R L LR   
Sbjct: 77  REDERSPFG-------YEMQVKDLTVVGESDGYPIT---PKEHGTDFLMDHRHLYLRHIQ 126

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  II +       E F++  +PILT S+PEG  +       +  ++  + Q 
Sbjct: 127 PFAVLRIRNTIIAATYEFFNKEGFVKIDSPILTGSAPEGTTELFHTEYFDTDAY--MSQT 184

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  F R F   P FR E  ++ R   EF+ ++ EM+++ QDD L   E  +
Sbjct: 185 GQLYAEA-GAMAFGRVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAWMTQDDSLEVQERYI 243

Query: 258 RGVFEEFSNGNTVSNNFL----------------RICYDDAIRRYGTDKPDLRNPIIMHN 301
             + +   + N    + L                R+ YDDAI+    +  D+   +   +
Sbjct: 244 AYLIQAVLDRNQYELDLLGRDKELLQSYTQLPYPRVSYDDAIKLLQENDFDVEWGVDFGS 303

Query: 302 VTEHFVHSEF 311
             E F+ + F
Sbjct: 304 PEETFLANHF 313


>gi|296216963|ref|XP_002754814.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           [Callithrix jacchus]
          Length = 477

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 128/300 (42%), Gaps = 47/300 (15%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVRSEWVLCI 73
           G  V++ GWV  VR    ++FL + D   +   QVVA+   DS       SV       +
Sbjct: 41  GERVKVQGWVRSVRSQKEVLFLHVNDGSSLESLQVVADSSLDSRELTFGSSVE------V 94

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++   ++  N       +EL A+ I+++   +    P+  +  +P     +Y  L  
Sbjct: 95  QGQLVKSPSKRQN-------VELKAENIKVIGNCDAKTFPIRYKERHPLEYLRQYPHLRC 147

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-----RVNQ 188
           R + L   +  R+    ++        F+   TPI+T++  EGA +          ++ +
Sbjct: 148 RTNILGSILRIRSEATAAIHSFFKDNGFVHIHTPIITSNDCEGAGELFQLEAAGKIKIPE 207

Query: 189 GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            +F+ +P       QL   +M+  F + F   P FR E+ +S R   EFY ++ E+SFV+
Sbjct: 208 ENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVD 267

Query: 246 Q-DDILNTMENVLRGV---------------FEEFSNG------NTVSNNFLRICYDDAI 283
              D++  ME + +                 ++  + G      + + NNFL I Y +A+
Sbjct: 268 SLQDLMQVMEKLFKATTMMVLSNCPEDVKLCYKFIAPGQKDRLEHMLKNNFLIISYTEAV 327


>gi|50306525|ref|XP_453236.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642370|emb|CAH00332.1| KLLA0D03839p [Kluyveromyces lactis]
          Length = 555

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 127/286 (44%), Gaps = 25/286 (8%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPD-SACFEIAK---SVRS 67
            D G  V     VH  R  G  + FL +R    + Q  V AN + +   ++ K   S+  
Sbjct: 101 KDDGREVVFRARVHNSRQQGATLAFLTLRQQAELIQGLVKANKEGTVSKQMVKWVGSINL 160

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF-GEREYPES-- 123
           E ++ + G+V  +  E I +  +   +E+   KI  +S   E+LP+ +    R   E+  
Sbjct: 161 ESIVVVHGIV-KKVEEPIKSATVQN-LEVHITKIYTISETPEQLPILIEDASRSEAEAEA 218

Query: 124 ---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                     R   R +DLR  T       ++ +    R  +  + F E  TP L  +  
Sbjct: 219 AGLPVVNLDTRLDSRVIDLRTVTNQAIFRIQSGVCALFREFLTNKKFTEVHTPKLLGAPS 278

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EG  +    +     S+ A  Q+PQ YKQ L+A+ F+R F++AP FR E+  + R   EF
Sbjct: 279 EGGSNVFEVTYFKGKSYLA--QSPQLYKQQLIAADFERVFEVAPVFRAENSNTHRHMTEF 336

Query: 235 YQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
             LD+EM+F E  D++++T+  +   +F +           +R  Y
Sbjct: 337 TGLDLEMAFEEHYDEVVDTLAELFVFIFSQLKTRYAKEIALVRKQY 382



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H ++++ +  +   +  E  +        AF  G PPH G   
Sbjct: 468 YDFFMRGEEILSGAQRIHDADLLKERMNAHEVHPE--DPGLKDYCEAFTYGCPPHAGGGI 525

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM  L  KN+R  SLFP
Sbjct: 526 GLERVVMFYLDLKNIRRASLFP 547


>gi|115742929|ref|XP_001201004.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115911567|ref|XP_793329.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 441

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 126/294 (42%), Gaps = 28/294 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFE 60
           + +   +L    +   V +   +H  R  G   FL +R       G+  V         +
Sbjct: 74  KIYRVEELTADKIDQKVWIRARLHTSRSKGKQCFLVLRQQQFNCQGLLCVSDKVSKPMVK 133

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV----- 114
            A ++  E ++ ++G++ +        +     +EL  ++I ++S AE  LPL +     
Sbjct: 134 FAANITKESIVDVEGVIAAVPQPI--ESCTQKDVELHIEQIFVVSPAEPRLPLQIDDAAR 191

Query: 115 -FGEREYPES-------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
             G+ +   S       +R   R LDLR  T          ++   R  M   +F+E   
Sbjct: 192 AEGKDDDDSSLATVGQDVRLDNRVLDLRTTTNQAIFRLEAGVVQEFRAAMKKRDFVELQI 251

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P + +++ EG  +    S     ++ A  Q+PQ YKQ+ +A+ F+R F I   FR ED  
Sbjct: 252 PKIISAASEGGANVFTVSYFKNNAYLA--QSPQLYKQMGIAADFERVFTIGAVFRAEDSN 309

Query: 227 SDRLPGEFYQLDMEMSFV----EQDDILNTMEN-VLRGVFEEFSNG-NTVSNNF 274
           + R   EF  LDMEM+F     E  D++ ++ N + RG+ + F     TV   F
Sbjct: 310 THRHLCEFVGLDMEMAFKYHYHEALDVIGSVFNDIFRGLRDNFQTEIQTVRRQF 363


>gi|254555960|ref|YP_003062377.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300767762|ref|ZP_07077672.1| asparagine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|254044887|gb|ACT61680.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300494747|gb|EFK29905.1| asparagine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 431

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 117/282 (41%), Gaps = 32/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G I FL +RD     Q VA  +      F     +  E  L + G +
Sbjct: 17  VKIGVWISNKRSSGKIAFLQLRDGTATFQGVALKNELGETAFAQLTDLAQETSLWVTGTI 76

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            + +             EL+  + E++  + + P+     +++       +R L LR   
Sbjct: 77  HADTRSPFG-------YELAISQFEVVGTSHDYPIT---PKDHGIDFLLDHRHLWLRSSR 126

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            +  +  R  +I ++        FI+   PILT S+PEG  +        Q ++  L Q+
Sbjct: 127 PNAIMRIRNEVIRAVYEFFNDRGFIKIDAPILTGSAPEGTTELFKTDYFGQDAY--LSQS 184

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN-- 255
            Q Y +   A  F + F   P FR E  ++ R   EF+QL+ EM+++ QD+ L   E   
Sbjct: 185 GQLYGEA-GAMAFGKIFTFGPTFRAEKSKTRRHLTEFWQLEPEMAWIHQDESLEVQEQLV 243

Query: 256 --VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283
             +++ V +   +   V +             F R+ YDDAI
Sbjct: 244 AYLVQAVIDHCPHELAVLDRDVATLQKYTKLPFPRVSYDDAI 285


>gi|160946714|ref|ZP_02093917.1| hypothetical protein PEPMIC_00672 [Parvimonas micra ATCC 33270]
 gi|158447098|gb|EDP24093.1| hypothetical protein PEPMIC_00672 [Parvimonas micra ATCC 33270]
          Length = 493

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 138/285 (48%), Gaps = 29/285 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDG 75
           G  VRL+G +   R HG + F+D++D  G  Q+    D     +E  K++    ++ ++G
Sbjct: 51  GKVVRLAGRIRTKRGHGKVCFMDLQDFSGKIQLFNKLDVLGESYEEVKTLDIGDIVGVEG 110

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLR 134
            V +  A         G+I + + K+ +L+ + + LP    G ++    +R++ R++DL 
Sbjct: 111 EVFTTHA---------GEISIRSSKVVLLTKSLQLLPEKFHGLKDV--DLRYRQRYVDLI 159

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
            +   K++ V R++II+S+R  + +  F+E  TPIL T      AR F+          Y
Sbjct: 160 VNPEIKDVFVMRSKIISSIRKYLDSRGFLEVETPILNTIPGGANARPFITHHNTLDIDMY 219

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDMEMSFVEQDDILN 251
            L  A + Y + L+  GFD+ +++   FR+E    D+L   E+  +++  ++V+ ++++ 
Sbjct: 220 -LRIANELYLKRLIVGGFDKVYEMGRMFRNEG--MDKLHNPEYTAIELYQAYVDYEEMMK 276

Query: 252 TMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
             E ++  V  E    + V            + RI   DA++ Y 
Sbjct: 277 LCEEMVYTVCMEVVGKSEVELQGKVIDFKPPWRRISMVDAVKEYA 321



 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR++M L     +R+V LFP
Sbjct: 447 ALEIGLPPTGGMGIGIDRLIMYLTNQDTIRDVLLFP 482


>gi|315051948|ref|XP_003175348.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311340663|gb|EFQ99865.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 947

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 3/143 (2%)

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           P+  R   R LDLR DT       ++ I    R  + A+NFIE  TP L A++ E     
Sbjct: 260 PDRTRLSNRILDLRTDTSQSIFRIQSAISTMFRSALDAQNFIEIHTPKLQAAATESGASV 319

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F  L Q+PQ  KQ+ +AS F+R ++I   FR E+  + R   E+  LD+E
Sbjct: 320 FGVNYFGRPAF--LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIE 377

Query: 241 MSFVEQ-DDILNTMENVLRGVFE 262
           M+  E   + L  ++ VL+ +F+
Sbjct: 378 MAIEEHYHEALEVLDGVLKSIFK 400



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +D+   G EI SGG R H  +++ +    VGI    +E    G    F+ G PPH G
Sbjct: 504 TLSFDIFVRGQEIVSGGQRIHDPDLLEKRMREVGIEPSTMEEYMEG----FKWGAPPHAG 559

Query: 539 IAAGIDRIVMLLLGAKNVREVSLF 562
              G++R++ML+L   N+R  SLF
Sbjct: 560 AGIGLERLLMLILKLGNIRLGSLF 583


>gi|261196496|ref|XP_002624651.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239595896|gb|EEQ78477.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 941

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 25/267 (9%)

Query: 17  VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ-VVANPDSAC----FEIAKSVRSEWV 70
           +G  V     VH +R     ++F+ +R      Q V+A    A      + A+ +R   +
Sbjct: 132 IGQEVTFRARVHHIRNMSSKLVFIILRQQITTIQGVLAEKPGAISTLMIQWAEHIRVGSI 191

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--------- 121
           + + G++           I   +I++    + I+   +++P  V+ E E P         
Sbjct: 192 VKVKGVLTKSKVPVTGTTIHDVEIDIQGLHV-IVHRQDQIPFSVY-EAELPSKDVSSDGR 249

Query: 122 -----ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                +  R   R LDLR DT       ++ + N  R  + A+ FIE  TP L +S+ E 
Sbjct: 250 RNHVLDRTRLSNRILDLRTDTSQSIFRIQSAVSNLFRSSLDAQGFIEIHTPKLQSSATES 309

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R   E+  
Sbjct: 310 GASVFEVKYFTREAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTG 367

Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVFE 262
           LD+EM+  E   + L  +++VL+ +F+
Sbjct: 368 LDIEMAIEEHYHEALEIVDSVLKEIFK 394



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H  +++ +   +VGI+   +E    G    F+   PPH G   
Sbjct: 500 FDIFVRGQEIVSGGQRIHDEKILEKRMKDVGINPATMEEYMEG----FRWAAPPHAGAGI 555

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R++ML+L   N+R  SLF
Sbjct: 556 GLERLIMLILKLGNIRLASLF 576


>gi|304406895|ref|ZP_07388549.1| asparaginyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304343882|gb|EFM09722.1| asparaginyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 433

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 121/296 (40%), Gaps = 34/296 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSA--CFEIAKSVRSEWVLCI 73
            G  V +  W+   R  G I FL +RD  G  Q V+A  +++   +E A+ +  E  L +
Sbjct: 16  AGESVTIGCWLQGKRSSGKIQFLKLRDGSGFIQGVLAKSEASEQAWEAAQKLTQESSLYV 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V                 ELS   IE++   E+ P+     +E+        R L L
Sbjct: 76  TGIVREEPRSPSG-------YELSVTGIEVIQYTEDYPI---TPKEHGVDFLMDRRHLWL 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +V R +II +++       F     PILT SS EG  +       ++ ++  
Sbjct: 126 RSPKQRAILVIRAQIIRAVQQFFDESGFTLVDPPILTPSSCEGTTNLFHTKYFDEDAY-- 183

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ EM+FV+ +  L   
Sbjct: 184 LTQSGQLYMEA-AAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVDHEQNLEVQ 242

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIR---RYGTDKP 291
           E  +  V +               + S    V   F RI YD+AI    + G D P
Sbjct: 243 EQFISFVVQSVLTNCKAELETIGRDISKLENVQVPFPRITYDEAIELLHKEGFDLP 298


>gi|145352373|ref|XP_001420524.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580758|gb|ABO98817.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 491

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 114/264 (43%), Gaps = 26/264 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-----ANPDSACFEIAKSVRSEWVLCIDG 75
           V L G VH VR  G   F+ +R      QV       N      + A ++  E V+ + G
Sbjct: 46  VLLRGRVHNVRGKGKSAFIVLRQQTATVQVTLFVDDVNVSKGMVKWASALARESVVDVKG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES----------- 123
           LV+    E    +    ++E+  ++I  +S ++ ELP  +  +   P+S           
Sbjct: 106 LVVH--PEVPIESCTQKEVEVVCREIHCISRSDPELPF-LIEDASRPDSAFEAEDTQFVR 162

Query: 124 ----IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   R +DLR    +     ++ +    R  ++  NF E  TP L A + EG   
Sbjct: 163 VLQDTRLNNRVMDLRTPANNAIFKIQSGVGTLFREALLRRNFTEIHTPKLIAGASEGGAA 222

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                 +  G    L Q+PQ YKQ+ +    +  F+I P FR ED  + R   EF  LDM
Sbjct: 223 VFKLDYMQVGP-ACLAQSPQLYKQMAIMGDLEGVFEIGPVFRAEDSNTHRHLCEFTGLDM 281

Query: 240 EMSFVEQ-DDILNTMENVLRGVFE 262
           EM+  E  D++L+ ++ +   +F+
Sbjct: 282 EMTIKEHYDEVLDVLDELFVSMFD 305



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H  +++ +     GI    ++        +F+ G  PHGG   
Sbjct: 406 FDIFIRGQEIISGAQRIHDPKLLAERAEACGIELPTIQPYID----SFKYGAMPHGGCGV 461

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML L   N+R+ S+FP
Sbjct: 462 GLERVAMLFLNLPNIRKTSMFP 483


>gi|303323143|ref|XP_003071563.1| aspartyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240111265|gb|EER29418.1| aspartyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 937

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 28/269 (10%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-----AKSVRSEWV 70
            G  +     +H VR  G  ++FL  R      Q V         I     A+ +R   +
Sbjct: 127 AGQEITFRARLHVVRRMGQKLVFLVFRQQVITLQGVLTEKKGEISILMIQWAEHIRVGSI 186

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVF-------------G 116
           L + G++  R  E          +E+  Q+I ++   EE +P  V+             G
Sbjct: 187 LKVKGVI--RKPEVPVIGTTMHDLEVHIQEIHVIVRREEPIPFSVYEAELPAVEEEKIEG 244

Query: 117 ER-EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS-MRCRMIAENFIECSTPILTASSP 174
            R   P+  R   R LDLR DT  ++I +   +I+S  R  + +  FIE  TP L  ++ 
Sbjct: 245 RRTRVPDRTRLSNRILDLRTDT-SQSIFRIQSVISSYFRSTLDSMGFIEIHTPKLQGAAT 303

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           E           N+ +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R   E+
Sbjct: 304 ESGASVFSVRYFNRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEY 361

Query: 235 YQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
             LD+EM+  E   + L  ++ V++ +FE
Sbjct: 362 TGLDIEMAIEEHYHESLEVIDQVIKKIFE 390



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SGG R H   ++ +    +G+    +E    G    FQ G+PPH G   
Sbjct: 497 YDIFVRGQEIVSGGQRIHNPIMLEERMRQMGVDPASMEEYMEG----FQWGVPPHAGAGI 552

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R++ML+L   N+R  S+F
Sbjct: 553 GLERMLMLILKLGNIRLASMF 573


>gi|119189367|ref|XP_001245290.1| hypothetical protein CIMG_04731 [Coccidioides immitis RS]
          Length = 937

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 28/269 (10%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-----AKSVRSEWV 70
            G  +     +H VR  G  ++FL  R      Q V         I     A+ +R   +
Sbjct: 127 AGQEITFRARLHVVRRMGQKLVFLVFRQQVITLQGVLTEKKGEISILMIQWAEHIRVGSI 186

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVF-------------G 116
           L + G++  R  E          +E+  Q+I ++   EE +P  V+             G
Sbjct: 187 LKVKGVI--RKPEVPVIGTTMHDLEVHIQEIHVIVRREEPIPFSVYEAELPAVEEEKIEG 244

Query: 117 ER-EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS-MRCRMIAENFIECSTPILTASSP 174
            R   P+  R   R LDLR DT  ++I +   +I+S  R  + +  FIE  TP L  ++ 
Sbjct: 245 RRTRVPDRTRLSNRILDLRTDT-SQSIFRIQSVISSYFRSTLDSMGFIEIHTPKLQGAAT 303

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           E           N+ +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R   E+
Sbjct: 304 ESGASVFSVRYFNRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEY 361

Query: 235 YQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
             LD+EM+  E   + L  ++ V++ +FE
Sbjct: 362 TGLDIEMAIEEHYHESLEVIDQVIKKIFE 390



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SGG R H   ++ +    +G+    +E    G    FQ G+PPH G   
Sbjct: 497 YDIFVRGQEIVSGGQRIHNPIMLEERMRQMGVDPASMEEYMEG----FQWGVPPHAGAGI 552

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R++ML+L   N+R  S+F
Sbjct: 553 GLERMLMLILKLGNIRLASMF 573


>gi|327350292|gb|EGE79149.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 971

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 25/267 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ-VVANPDSAC----FEIAKSVRSEWV 70
           +G  V     VH +R     ++F+ +R      Q V+A    A      + A+ +R   +
Sbjct: 162 IGQEVTFRARVHHIRNMSSKLVFIILRQQITTIQGVLAEKPGAISTLMIQWAEHIRVGSI 221

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--------- 121
           + + G++           I   +I++    + I+   +++P  V+ E E P         
Sbjct: 222 VKVKGVLTKSKVPVTGTTIHDVEIDIQGLHV-IVHRQDQIPFSVY-EAELPSKDVSSDGR 279

Query: 122 -----ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                +  R   R LDLR DT       ++ + N  R  + A+ FIE  TP L +S+ E 
Sbjct: 280 RNHVLDRTRLSNRILDLRTDTSQSIFRIQSAVSNLFRSSLDAQGFIEIHTPKLQSSATES 339

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R   E+  
Sbjct: 340 GASVFEVKYFTREAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTG 397

Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVFE 262
           LD+EM+  E   + L  +++VL+ +F+
Sbjct: 398 LDIEMAIEEHYHEALEIVDSVLKEIFK 424



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H  +++ +   +VGI+   +E    G    F+   PPH G   
Sbjct: 530 FDIFVRGQEIVSGGQRIHDEKILEKRMKDVGINPATMEEYMEG----FRWAAPPHAGAGI 585

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R++ML+L   N+R  SLF
Sbjct: 586 GLERLIMLILKLGNIRLASLF 606


>gi|50286523|ref|XP_445690.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524995|emb|CAG58601.1| unnamed protein product [Candida glabrata]
          Length = 553

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 122/295 (41%), Gaps = 34/295 (11%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAK------ 63
           DL   D    V     VH  R  G  + FL +R    + Q +   D A  +I+K      
Sbjct: 94  DLSKEDADKEVLFRARVHNTRQQGATLAFLTLRQQSSLIQALVKADKAGEKISKNMVKWA 153

Query: 64  -SVRSEWVLCIDGLVMS-----RSAETINANIITGQIELSAQKIEILSV----------- 106
            S+  E ++ + G+V       +SA   +  I   QI   ++  E L +           
Sbjct: 154 GSLNLESIVLVRGIVKVVDEPIKSATIQDLEIHVTQIHTISETPETLPILIEDASRSEAE 213

Query: 107 AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
           AE   LPV          R   R +DLR  T       +  +    R  +  + F+E  T
Sbjct: 214 AEAAGLPVVNL-----DTRLDNRVIDLRTVTNQAIFRIQHGVCALFREFLANKKFVEVHT 268

Query: 167 P-ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           P +L A+S  GA  F V     +G  Y L Q+PQ  KQ L+ + F++ F+I P FR E+ 
Sbjct: 269 PKMLGAASEGGANVFEVT--YFKGKAY-LAQSPQFNKQQLIVADFEKVFEIGPVFRAENS 325

Query: 226 RSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
            + R   EF  LDMEM+F E   ++L+ +  +   +F E           +R  Y
Sbjct: 326 NTHRHMTEFTGLDMEMAFEEHYHEVLDVLSELFVFLFTELKKRYAKEIELVRKQY 380



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H  +++++     G+  E  +         F  G PPH G   
Sbjct: 466 YDFFMRGEEILSGAQRIHDHKMLMERMKVHGLDPE--DPGLKDYCDGFSYGCPPHAGGGI 523

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM  L  KN+R  SLFP
Sbjct: 524 GLERVVMFFLDLKNIRRASLFP 545


>gi|326502956|dbj|BAJ99106.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 544

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 112/262 (42%), Gaps = 30/262 (11%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ--VVANPDSAC----FEIA 62
           GDL  +  G  V + G    +RP    + F+ +R      Q  +VA+PD+         A
Sbjct: 85  GDLDEAAAGRSVLIRGSAQTLRPVSKKMAFVVLRQSMSTVQCVLVASPDAGVSTQMVRFA 144

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPL----PVFGE 117
            S+  E ++ ++G+V +   E + A   T Q+E+  +K+  ++ A   LP+        E
Sbjct: 145 TSLSKESIVDVEGIV-TLPKEPLKAT--TQQVEIQVRKVYCINRAIPTLPINLEDAARSE 201

Query: 118 REYPES-------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
            E+ ++              R  YR +DLR          +  + N  R  + +ENFI  
Sbjct: 202 AEFDKAEQNGEKLVRVLQDTRLNYRAIDLRTPANQAIFRIQCHVENKFREFLFSENFIGI 261

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            +P L   S EG           Q +   L Q+PQ YKQ+ +  GF R F++ P FR E 
Sbjct: 262 HSPKLIGGSSEGGASVFKLEYNGQPA--CLAQSPQLYKQMSICGGFGRVFEVGPVFRAEK 319

Query: 225 PRSDRLPGEFYQLDMEMSFVEQ 246
             + R   EF  LD EM   E 
Sbjct: 320 SNTHRHLCEFIGLDAEMEIKEH 341



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H  E++ +     GI    +         +F  G PPHGG   
Sbjct: 459 FDVFIRGEEIISGAQRIHTPELLRKRAIECGIDASTI----ASYIESFSYGAPPHGGFGV 514

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML     N+R+ SLFP
Sbjct: 515 GLERVVMLFCALNNIRKTSLFP 536


>gi|258566145|ref|XP_002583817.1| hypothetical protein UREG_06784 [Uncinocarpus reesii 1704]
 gi|237907518|gb|EEP81919.1| hypothetical protein UREG_06784 [Uncinocarpus reesii 1704]
          Length = 938

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 26/266 (9%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHY-----GITQVVANPDSACFEIAKSVRSEWVL 71
           G  +     +H VR  G  ++FL  R         +T+      +   + A+ +R   +L
Sbjct: 129 GQEITFRARLHVVRRMGQKLVFLVFRQQVITLQGVLTEAKGEISTLMVQWAEHIRVGSIL 188

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVF-------------GE 117
            + G++       I   I    IEL  +++ ++   EE +P  V+             G 
Sbjct: 189 RVKGILRKPEVPVIGTTI--HDIELHIRELHVIVRREEPVPFSVYEAELPAADEEKIEGR 246

Query: 118 R-EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           R   P+  R   R LDLR DT       ++ I +  R  + A  FIE  TP L  S+ E 
Sbjct: 247 RTRVPDRTRLTNRILDLRTDTSQSIFRIQSAISSYFRSTLDANGFIEIHTPKLQGSATES 306

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                  +  ++ +F  L Q+PQ  KQ+ +AS F+R ++I   FR E+  + R   E+  
Sbjct: 307 GASVFNVNYFSRPAF--LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTG 364

Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVF 261
           LDMEM   E   + L+ ++ V++ +F
Sbjct: 365 LDMEMVIEEHYHESLDVLDQVIKAIF 390



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SGG R H   ++ +    +GI    +E    G    F+ G PPH G   
Sbjct: 498 YDIFVRGQEIVSGGQRIHDPVMLEERMKKMGIDPASMEEYMEG----FRWGAPPHAGAGI 553

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R++ML+L   N+R  SLF
Sbjct: 554 GLERMLMLILKLGNIRLASLF 574


>gi|153813414|ref|ZP_01966082.1| hypothetical protein RUMOBE_03834 [Ruminococcus obeum ATCC 29174]
 gi|149830506|gb|EDM85597.1| hypothetical protein RUMOBE_03834 [Ruminococcus obeum ATCC 29174]
          Length = 448

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 24/258 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G S +   V L G VH +R  G + F+ +R   G+ Q V   + A   I   ++    L 
Sbjct: 25  GTSLLNQEVVLEGAVHSIRNMGDVAFVILRRSEGLFQTVVENEKANLSI-HDLKEAMTLR 83

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFL 131
           + G++                 E+  Q+IEILS  AE +PL +  + +   S+  K   L
Sbjct: 84  VKGILHEEERAPHGR-------EVRVQEIEILSSPAEPMPLAI-DKWKLNTSLEAK---L 132

Query: 132 DLRRDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           +LR   L +NI +R++      ++ + R  +  + F E  TP + A   EG  +    S 
Sbjct: 133 NLRPIAL-RNIQERSKFKIQEALVRAFRDFLYEQGFTEIHTPKIGARGAEGGANLFKFSY 191

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ +   L Q+PQ YKQ+ M   FDR F+  P FR E   + R   E+  LD EM +++
Sbjct: 192 FHKPA--VLAQSPQFYKQM-MVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGYID 248

Query: 246 Q-DDILNTMENVLRGVFE 262
             +DI+      L+   E
Sbjct: 249 GFEDIMGMETGFLQYAME 266



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+ +G E+ +GG R H    +    +  G+ +E +E         F+ GMPPHGG
Sbjct: 360 TLSFDLLFHGLEVTTGGQRIHDYNQLKAKIAARGMEEEGMEQYLD----TFKHGMPPHGG 415

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +  G++R+ M LLG +NVRE  LFP   N
Sbjct: 416 LGIGLERLTMQLLGEENVREACLFPRDLN 444


>gi|160936241|ref|ZP_02083614.1| hypothetical protein CLOBOL_01137 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441051|gb|EDP18775.1| hypothetical protein CLOBOL_01137 [Clostridium bolteae ATCC
           BAA-613]
          Length = 443

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 121/253 (47%), Gaps = 24/253 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  +R++G VH +R  G + F+ +R   G+ Q V       F+I + ++ E  + + G+V
Sbjct: 25  GKEIRMNGAVHTIRHMGEVAFVILRKSRGLVQCVYEAGITDFDI-RELKEESAVEVMGVV 83

Query: 78  MSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            +               E+  ++I +LS  AE LPL V  + +   S+  K   L LR  
Sbjct: 84  KAEERAPQG-------FEIRLKEIRVLSRPAEPLPLAV-SKWKLNTSLETK---LSLRPI 132

Query: 137 TLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           +L +N+ +R +      I+   R  +++ +F E  TP + A   EG  +       N+ +
Sbjct: 133 SL-RNVRERAKFKIQEGIVRGFRDYLLSRDFTEIRTPKIVARGAEGGSNVFKLEYFNKKA 191

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDI 249
              L Q+PQ YKQ  M   +DR F+ AP FR E   + R   E+  LD EM +++   D+
Sbjct: 192 --ELGQSPQFYKQT-MVGVYDRVFEAAPVFRAEKHNTTRHLNEYTSLDFEMGYIDSFRDV 248

Query: 250 LNTMENVLRGVFE 262
           ++    +L+ V +
Sbjct: 249 MDMETGMLQYVMK 261



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G E+ +GG R H    +       G+  E +          F+ GMPPHGG
Sbjct: 355 TLSFDLLFRGLEVTTGGQRIHDYREITAKMEKRGMDPEDI----ASYLMIFKYGMPPHGG 410

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M LL  +NVRE SLFP
Sbjct: 411 LGIGLERLTMRLLDEQNVREASLFP 435


>gi|255720298|ref|XP_002556429.1| KLTH0H13024p [Lachancea thermotolerans]
 gi|238942395|emb|CAR30567.1| KLTH0H13024p [Lachancea thermotolerans]
          Length = 554

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 125/285 (43%), Gaps = 25/285 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V   V++SGW+HR+R    ++F+ +RD  G  Q V   D A      ++  E  + + G 
Sbjct: 128 VDQRVKVSGWIHRLRSSKSLVFIVLRDGTGFLQAVLTGDLARAYQTTALTLESTVTLYGK 187

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDL 133
           V  +  E  NA    G +EL     E++S+A   E+       E   P S+    R L L
Sbjct: 188 V-CKLPEGKNA---PGGVELLVDYYEVVSLAPSGEDAFTNKIAEGADP-SLLLDQRHLAL 242

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +TL   +  R  ++ ++R     E   E +TP +  +  EG           + ++  
Sbjct: 243 RGETLSGVMKVRAALLRAVRRFYYEEGLTEVNTPCMVQTQVEGGSTLFNLGYYGEEAY-- 300

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  +AS  D Y  I   FR E   + R   E+  ++ E+ F+  DD+L  +
Sbjct: 301 LTQSSQLYLETCLASLGDVYC-IQESFRAEKSHTRRHLSEYTHIEAELCFLTFDDLLVHI 359

Query: 254 ENVL----RGVFEEFSNGNTVSN----------NFLRICYDDAIR 284
           E ++    R V E+   G  V             F+R+ Y DAI+
Sbjct: 360 EKLITTAVRYVLEDPVAGPLVEQLNPGFKAPTMPFMRLDYRDAIK 404


>gi|304316831|ref|YP_003851976.1| asparaginyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778333|gb|ADL68892.1| asparaginyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 433

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 32/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSA--CFEIAKSVRSEWVLCI 73
           VG  V + GW++  R  G I FL IRD  G  Q VV   + A   FE+   +  E  + +
Sbjct: 15  VGEEVTIKGWLYNKRSSGKIKFLIIRDGSGFVQGVVVKNEVAEDVFELCDKLTQESSITV 74

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLD 132
            G+V                 EL+   I+++ +A  + P+ +   +E+        R L 
Sbjct: 75  TGVVRKDDRSPYG-------YELTISSIKLIQMAFNDYPISL---KEHGVDFLLDNRHLW 124

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R    H  +  R  +I +++  +    F+   +PI+T S+ EG  D        + ++ 
Sbjct: 125 IRTPKQHAILSIRHEVIKAIQEFLNNNGFVRIDSPIITPSTCEGTSDLFQIDYFGENAY- 183

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q  Q Y++   A    + +   P FR E  ++ R   EF+ ++ EMSFV+  + +  
Sbjct: 184 -LSQTGQLYQEA-AAMALGKVYSFGPTFRAEKSKTRRHLNEFWMVEPEMSFVDHYENMEI 241

Query: 253 MEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
            E     +++ V E           + S    +   F R+ YD+AI
Sbjct: 242 QEKLVEYIVQSVLENRSKELKELGRDLSKLEKIKTPFPRLTYDEAI 287


>gi|269793269|ref|YP_003318173.1| asparaginyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100904|gb|ACZ19891.1| asparaginyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 435

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 123/296 (41%), Gaps = 33/296 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCID 74
           G  V + GWV+  R  G I FL +RD  G  Q V    S   E+  + +S W+   + I+
Sbjct: 16  GKRVTIKGWVYNKRSSGKIHFLQVRDGSGFIQAVMERSSVSEELFAAAKSLWLEASVEIE 75

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V          +      EL    + I+S    L  P+  ++E+       +R L LR
Sbjct: 76  GTVR-------RDDRAPSGFELGVTDLRIVS-NPTLEYPI-SKKEHGIDFLLDHRHLWLR 126

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
                  +  R R+I S R  + ++ F+   +PILT S  EGA         + G  Y L
Sbjct: 127 SRRQRCIMAIRDRVILSCRNFLHSKGFMLVDSPILTGSIGEGADGLFELDYFDLGKAY-L 185

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q  Q Y +   A+ + R +   P FR E  ++ R   EF+ ++ E +F E  D +   E
Sbjct: 186 AQTGQLYLEAAAAA-YGRVYCFGPTFRAEKSKTRRHLTEFWMIEPEAAFFEHRDNMALQE 244

Query: 255 NVLRGVFEEF----------------SNGNTVSNNFLRICYDDAIR---RYGTDKP 291
            ++  + +E                 +    V   F  I YD+A++   + G+D P
Sbjct: 245 EMVSHLVKEVLEHHEKDLVFLERDVDALARAVDGPFHHITYDEAVKLLHKLGSDIP 300


>gi|299144546|ref|ZP_07037625.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298517634|gb|EFI41374.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 500

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 122/249 (48%), Gaps = 20/249 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDG 75
           G  V ++G +   R HG I FLD++D  G  Q+ A  D     +E  K      ++ ++G
Sbjct: 54  GKKVSIAGRIMSKRRHGKIAFLDVQDKLGRIQIFARKDVLLDNYEDIKGYDMGDIIGVEG 113

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V    A         G+I + A+   +LS + ++    F   + P+ +R++ R++DL  
Sbjct: 114 EVFKTEA---------GEISVRAESTLLLSKSLQILPEKFHGLKDPD-LRYRQRYVDLIV 163

Query: 136 DTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193
           +   K++ +KRT+I+ S+R  + + +F+E  TPIL T +    AR FL            
Sbjct: 164 NPEIKDVFIKRTKILKSIRNYLDSRDFLEVETPILATVAGGANARPFLTHHNTLDMDM-Q 222

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  A + + + L+  G DR +++   FR+E   +   P EF  +++  ++ + +D++   
Sbjct: 223 MRIANELFLKRLIVGGMDRVYEMGKMFRNEGMDTRHNP-EFTNIEVYQAYADYEDMMRLT 281

Query: 254 ENVLRGVFE 262
           E    G+FE
Sbjct: 282 E----GIFE 286



 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR+VMLL    ++R+V  FP
Sbjct: 450 ALEVGLPPTGGLGIGVDRMVMLLTDQPSIRDVVFFP 485


>gi|146413276|ref|XP_001482609.1| asparaginyl-tRNA synthetase [Meyerozyma guilliermondii ATCC 6260]
          Length = 544

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 25/285 (8%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           ++GS V + GW+HR+R   G+ F+ +RD  G  Q V   D A  +    +  E  +CI G
Sbjct: 117 NIGSRVAVRGWIHRLRLQKGLGFVTVRDGTGYVQCVLTGDLAKAKSTHELTLETSICIKG 176

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLD 132
            V+++  E  +A    G +EL A   E++  A   EE       E   P S+    R L 
Sbjct: 177 -VINKLPEGKSA---PGGVELKADFYEVVGQAPSGEESFSNKVQENADP-SLLLDQRHLT 231

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR + L   +  R+  + ++R     E  +E + P +  +  EG       +   + ++ 
Sbjct: 232 LRGEALSAVMKVRSAFLYAIRRFFEEEGLLEVTPPCMVQTQVEGGSTLFKMNYYGEDAY- 290

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  + S  D  F +   FR E   + R   E+  ++ E++F++ +D+L  
Sbjct: 291 -LTQSSQLYLETCLPSLGD-VFCVQESFRAEKSHTRRHLSEYTHIEGELAFIDFEDLLVH 348

Query: 253 MENVL----RGVFEEFSNGNTVSN----------NFLRICYDDAI 283
           +E +L    + V E+   G  +             FLR+ Y DA+
Sbjct: 349 LEKLLTQTVKYVLEDPVAGPLIKQLNPNFVAPKGPFLRMEYVDAL 393


>gi|242212694|ref|XP_002472179.1| predicted protein [Postia placenta Mad-698-R]
 gi|220728737|gb|EED82625.1| predicted protein [Postia placenta Mad-698-R]
          Length = 452

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 119/281 (42%), Gaps = 25/281 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR SGWVHR+R    IIF+ +RD  G  Q V +   A    A ++  E  + + G +   
Sbjct: 37  VRTSGWVHRLRDQNKIIFVVLRDGTGYLQCVLSGQVAQTYEALTLTLESTVELVGTLQ-- 94

Query: 81  SAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
             E        G  EL      +L  +   E+       E+  P SI+   R L +R +T
Sbjct: 95  --EVPEGKTAPGGHELIVDYWRVLGASPGGEDAFTNRLNEKSDP-SIQADLRHLVVRGET 151

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +++S R  ++A + +E + P +  +  EG           Q +F  L Q+
Sbjct: 152 ASAVLKLRAALLSSFRSSLVARDLLEVTPPCMVQTQVEGGATLFKFDYYGQPAF--LTQS 209

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  + S  D  F +   FR E+  + R   E+  L+ E++F+  DD+++ +E V+
Sbjct: 210 SQLYLETCLPSLGD-VFCVQESFRAENSHTRRHLSEYTHLEAELAFITFDDLMDHIEGVI 268

Query: 258 RGVFEEF--------------SNGNTVSNNFLRICYDDAIR 284
               +                 N    +  F R+ Y DAI+
Sbjct: 269 CDTVDRLLENPSSAALIKQLNPNFTAPARPFRRLSYVDAIK 309


>gi|121535048|ref|ZP_01666865.1| lysyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121306298|gb|EAX47223.1| lysyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 498

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 116/248 (46%), Gaps = 17/248 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCID 74
           G  VRL+G +  +R HG   F  + D  G  QV    D    A ++  + +    ++ ++
Sbjct: 59  GQTVRLAGRIMAIRGHGKATFAHLMDMSGRIQVYFRQDVLGEAAYDFFRLLDIGDIIGVE 118

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G+V              G+I + A   EIL+ +   PLP           R++ R+LDL 
Sbjct: 119 GVVFKTQ---------RGEISVKATSFEILAKSLR-PLPEKWHGLKDVETRYRQRYLDLI 168

Query: 135 RDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +   +N  V R+RII +MR  + ++ F+E  TP++   +    AR F+        + Y
Sbjct: 169 VNPEVRNTFVLRSRIIQAMRRYLDSKGFLEVETPMMHPIAGGAAARPFITYHNALDMNLY 228

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y + L+  GF+R ++I   FR+E   S R   EF  +++  ++ +  DI+  
Sbjct: 229 -MRIAPELYLKRLIVGGFERVYEIGRVFRNEGI-SIRHNPEFTLMELYQAYADYQDIMKI 286

Query: 253 MENVLRGV 260
            E ++  V
Sbjct: 287 TEEIIAQV 294



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVILFP 491


>gi|227486473|ref|ZP_03916789.1| possible lysine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235654|gb|EEI85669.1| possible lysine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 637

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 124/245 (50%), Gaps = 18/245 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDGLVM 78
           VR++G +   R HG + F+D++D  G  QVV   N     F+  K      ++ ++G V 
Sbjct: 56  VRVAGRILAKRGHGNMSFMDVQDDLGQIQVVNRKNVIGDDFKYIKKYDIGDIIGVEGKVF 115

Query: 79  SRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
             +          G+I +   K ++L+ A + LP    G ++ P+ +R++ R++DL  + 
Sbjct: 116 KTNQ---------GEISIEVAKSDLLTKALQMLPEKWHGLKD-PD-LRYRQRYIDLIVNP 164

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
             K + V+R+RII+++R  +    F+E  TPIL T +    AR F+          Y L 
Sbjct: 165 EVKEVFVQRSRIISAIREFLDGRGFLEVETPILNTIAGGATARPFITHHNTLDIDMY-LR 223

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + Y + L+  GFDR ++I   FR+E   +   P E+  +++  ++ + +D++   EN
Sbjct: 224 IANELYLKRLIVGGFDRVYEIGRMFRNEGMDATHNP-EYTAMELYQAYGDYEDMMEITEN 282

Query: 256 VLRGV 260
           ++  V
Sbjct: 283 MVEHV 287



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR++M+L G  ++R+V LFP
Sbjct: 447 ALEVGLPPTGGLGIGIDRLIMILTGQHSIRDVLLFP 482


>gi|323703770|ref|ZP_08115409.1| asparaginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323531294|gb|EGB21194.1| asparaginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 430

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 125/287 (43%), Gaps = 36/287 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANPDSACFEIAKSVRSEWVLCID 74
           VG  V + GW++  R  G I FL +RD  G+ Q  +V N     FE+AK++  E  L + 
Sbjct: 14  VGEEVTVQGWLYNKRSSGKIQFLIVRDGTGLVQGVLVKNEAPELFELAKTLTQESSLRLK 73

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G+V              G  EL+   +EI+ +AEE P+     +E+        R L +R
Sbjct: 74  GIVREEPR-------AVGGYELNVTDLEIIHIAEEYPI---THKEHGVDFLMDRRHLWIR 123

Query: 135 RDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             T  +N + R R  I  + R      +F    +PI+T ++ EG           + ++ 
Sbjct: 124 --TPRQNAILRIRAEIEQAARDFFHQNDFTLVDSPIITPAACEGTTTLFELDYHGEKAY- 180

Query: 193 ALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
            L Q+ Q Y +   MA G  R +   P FR E  ++ R   EF+ ++ E +F + +D + 
Sbjct: 181 -LSQSGQLYNEASAMAVG--RMYCFGPTFRAEKSKTRRHLMEFWMIEAEAAFFDHEDNMK 237

Query: 252 TMEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDDAI 283
             E     +++ V E           + S    +   F R+ Y +A+
Sbjct: 238 LQEELVYFIIQRVLERRRKDLEFLGRDISKLEAIKLPFPRLSYTEAV 284


>gi|189485651|ref|YP_001956592.1| lysyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287610|dbj|BAG14131.1| lysyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 489

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 134/270 (49%), Gaps = 14/270 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+ +G V   R  G   FLDI+D     Q+    D    E  K  +S  ++ I  ++   
Sbjct: 65  VKAAGRVMTYRNMGRAAFLDIKDGLAKIQIYIRADKMGEEQYKFFKS--MVDISDII--- 119

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
           + E I     T ++ +  +K  +L+ A   LP    G ++    IR + R+LDL  ++  
Sbjct: 120 AVEGIPFRTRTNELSIMVEKWTMLTKAFRPLPEKWHGLKDI--EIRCRQRYLDLIANSEV 177

Query: 140 KNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
           K+I VKR+ +I+++R ++    FIE  TPIL + +    AR F+        + + L  A
Sbjct: 178 KDIFVKRSMVISAVRHKLEELGFIEVETPILQSLAGGANARPFITHHNALDINLF-LRIA 236

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ + + L+  G DR F+I   FR+E    +  P EF  L++  ++ + +D+++  E ++
Sbjct: 237 PELFLKRLVVGGLDRVFEIGRNFRNEGIDKNHNP-EFTMLELYQAYADYNDMMDMSEILI 295

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
           +   ++   G+ ++  F R+   D I++Y 
Sbjct: 296 KAAAKKV--GSALNLEFTRVKMFDLIKKYA 323



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VM+L G +++REV +FP
Sbjct: 449 ALEQGLPPTGGLGIGIDRLVMVLTGVESIREVIIFP 484


>gi|42408999|dbj|BAD10253.1| putative Aspartyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|125580758|gb|EAZ21689.1| hypothetical protein OsJ_05322 [Oryza sativa Japonica Group]
          Length = 508

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 126/317 (39%), Gaps = 48/317 (15%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP--------DSACFEIA 62
           LG    G  VR+ G  H VR  G  + FL +R      Q V           D+     A
Sbjct: 48  LGPDVAGRAVRVRGAAHAVRAVGRRVAFLVLRQGSSTVQCVVGGGGGGGGGGDAGVARFA 107

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYP 121
             +  E V+ + G+V S   E +       ++E+  +K+  +S A   LP+ V       
Sbjct: 108 AGLSRESVVDVAGVV-SLPREPVRGTT-QQEVEIQVKKLYCISKATPNLPISVDDAARSE 165

Query: 122 ESI-----------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           E +                 R  +R +DLR          +  I N  R  +++E F+  
Sbjct: 166 EDVVKAKAAGEQLVHVGQDKRLDFRVIDLRTPANQAIFRVQCEIENIFRQVLLSEGFVGI 225

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP L   S EG           Q +   L Q+PQ +KQ+ +  GF+R F++ P FR ED
Sbjct: 226 HTPKLIGGSSEGGAAVFKLDYNGQPA--CLAQSPQLHKQMAICGGFERVFEVGPVFRAED 283

Query: 225 PRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNG-----NTVSNNF---- 274
             + R   EF  LDMEM+      ++ + ++ +   +F+  +         ++  +    
Sbjct: 284 SNTHRHLCEFVGLDMEMAIKGHYSEVCDVVDRLFVAMFDHLNKNCAKELEAINRQYPFKP 343

Query: 275 -------LRICYDDAIR 284
                  LRI YD+ IR
Sbjct: 344 LKYLPKTLRIEYDEGIR 360



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H+ EV+ +     GI              AF+ G PPHGG   
Sbjct: 423 FDVFVRGEEIISGAQRVHVPEVLARQAEERGIDV----GSIAAYVDAFRYGAPPHGGFGV 478

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML  G  N+R+ SLFP
Sbjct: 479 GLERVVMLFCGLGNIRKASLFP 500


>gi|190348970|gb|EDK41531.2| asparaginyl-tRNA synthetase [Meyerozyma guilliermondii ATCC 6260]
          Length = 544

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 25/285 (8%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           ++GS V + GW+HR+R   G+ F+ +RD  G  Q V   D A  +    +  E  +CI G
Sbjct: 117 NIGSRVAVRGWIHRLRLQKGLGFVTVRDGTGYVQCVLTGDLAKAKSTHELTLETSICIKG 176

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLD 132
            V+++  E  +A    G +EL A   E++  A   EE       E   P S+    R L 
Sbjct: 177 -VINKLPEGKSA---PGGVELKADFYEVVGQAPSGEESFSNKVQENADP-SLLLDQRHLT 231

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR + L   +  R+  + ++R     E  +E + P +  +  EG       +   + ++ 
Sbjct: 232 LRGEALSAVMKVRSAFLYAIRRFFEEEGLLEVTPPCMVQTQVEGGSTLFKMNYYGEDAY- 290

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  + S  D  F +   FR E   + R   E+  ++ E++F++ +D+L  
Sbjct: 291 -LTQSSQLYLETCLPSLGD-VFCVQESFRAEKSHTRRHLSEYTHIEGELAFIDFEDLLVH 348

Query: 253 MENVL----RGVFEEFSNGNTVSN----------NFLRICYDDAI 283
           +E +L    + V E+   G  +             FLR+ Y DA+
Sbjct: 349 LEKLLTQTVKYVLEDPVAGPLIKQLNPNFVAPKGPFLRMEYVDAL 393


>gi|194754517|ref|XP_001959541.1| GF12925 [Drosophila ananassae]
 gi|190620839|gb|EDV36363.1| GF12925 [Drosophila ananassae]
          Length = 530

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 24/262 (9%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD---SACFEIAKSVRSEWVLCIDG 75
            V + G VH  R  G   FL +R      Q ++A  D       + A ++  E ++ I  
Sbjct: 88  LVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGDIISKQMVKFAGNIPKESIIDIQA 147

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES----------- 123
             ++ +++    +     +ELS ++I ++S A+ +LPL +  +   PE+           
Sbjct: 148 KAVAVASKI--ESCTEQSLELSVEQIFVISQAKAQLPLQI-EDASRPENAEDDGLNIRVN 204

Query: 124 --IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              R   R LDLR             +    R  +  + F E  TP + +++ EG  +  
Sbjct: 205 QDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAASEGGANVF 264

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
             S     ++  L Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R   EF  LD+EM
Sbjct: 265 TVSYFKDSAY--LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVGLDLEM 322

Query: 242 SF-VEQDDILNTMENVLRGVFE 262
           +F     ++L+T+ N    +F+
Sbjct: 323 AFKYHYHEVLHTIGNTFTAIFK 344



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++   + GI      ++      +F+ G PPH G   
Sbjct: 445 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDT----SKIAAYIESFRYGCPPHAGGGI 500

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 501 GMERVVMLYLGLDNIRKTSMFP 522


>gi|332715976|ref|YP_004443442.1| aspartyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325062661|gb|ADY66351.1| aspartyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 438

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 12/240 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-KSVRSEWVLCIDG 75
           +G  V+L G+V  +R    + F+ +RD  G  Q+  N D+     A  ++  E  L   G
Sbjct: 19  IGQSVKLHGFVDTIRDQKHMRFIILRDGTGKVQLTQNKDNKALASALDTLTPESALMATG 78

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V++  A      +  G +E+     E+  +A+ L +P+   R+        +R + LR 
Sbjct: 79  TVVAAPA------VKLGGLEVILDGAEVCGLADSL-IPI--ARDSGLEKWLDHRQVSLRY 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
                    +T +  +MR       F E  +P L  ++ E   +       +  +F A  
Sbjct: 130 PEQQLVFAVQTTLEEAMREFWKQYGFREIHSPKLMGTASESGAEVFSVKYFDTTAFLA-- 187

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ YKQL +A G ++ F+I P FR E   + R   EF  +DME+S+++    L   E 
Sbjct: 188 QSPQFYKQLAIAGGMEKVFEIGPVFRAEPSFTSRHETEFTSIDMEISWIKDHHELMDFEQ 247



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI +G  R H  + ++      G+  + + + F      F+ G PPHGG+  
Sbjct: 353 FDLLWRGLEITTGAQREHRHDRLVAQAEQRGLKLDGLSDYFD----FFRFGCPPHGGMGV 408

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G+ RI+M LL A ++REV+L 
Sbjct: 409 GLGRIMMRLLNAASIREVTLL 429


>gi|254584945|ref|XP_002498040.1| ZYRO0G00726p [Zygosaccharomyces rouxii]
 gi|238940934|emb|CAR29107.1| ZYRO0G00726p [Zygosaccharomyces rouxii]
          Length = 552

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 114/244 (46%), Gaps = 11/244 (4%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V+++GW+HR+R +  ++F+ +RD YG  Q V   + A  +  + +  E  + + G 
Sbjct: 126 VGQRVKVNGWIHRIRNNKKLVFVVLRDGYGFLQAVLTGNLALAKQTQELTLESSVALYGT 185

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDL 133
           V ++  E  +A    G +ELS    E++ +A   E+       E   P S+    R L L
Sbjct: 186 V-NKLPEGKSA---PGGVELSVDYYEVVGLAPGGEDAFTNKVSENADP-SLLLDQRHLAL 240

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +TL   +  R   +  +R     E   E + P +  +  EG       +   + +F  
Sbjct: 241 RGETLSSMMKVRAIWMKCLRRFFENEGLTEVTPPCMVQTQVEGGSTLFKLNYYGEEAF-- 298

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  +AS  D Y  +   FR E   + R   E+  ++ E+ F++ DD+L+ +
Sbjct: 299 LTQSSQLYLETCLASLGDVYC-VQESFRAEKSHTRRHLSEYTHIEGELGFIDFDDLLSHL 357

Query: 254 ENVL 257
           E + 
Sbjct: 358 EKLF 361


>gi|194883504|ref|XP_001975841.1| GG20342 [Drosophila erecta]
 gi|190659028|gb|EDV56241.1| GG20342 [Drosophila erecta]
          Length = 531

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 114/269 (42%), Gaps = 37/269 (13%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V + G VH  R  G   FL +R      Q        C      V S+ ++   G +  
Sbjct: 88  LVWVRGRVHTSRAKGKQCFLILRQQSSTVQ--------CILAVGDVISKQMVKFAGNIPK 139

Query: 80  RSAETINAN--IITGQIE--------LSAQKIEILSVAE-ELPLPVFGEREYPES----- 123
            S   I A    ++G+IE        LS ++I ++S A+ +LPL +  +   PE+     
Sbjct: 140 ESIIDIQAKPVAVSGKIESCTEQSLELSVEQIFVISQAKAQLPLQI-EDASRPENADDAE 198

Query: 124 ---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                     R   R LDLR             +    R  +  + F E  TP + +++ 
Sbjct: 199 GLNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAAS 258

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EG  +    S     ++  L Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF
Sbjct: 259 EGGANVFTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEF 316

Query: 235 YQLDMEMSF-VEQDDILNTMENVLRGVFE 262
             LD+EM+F     ++L+T+ N    +F+
Sbjct: 317 VGLDLEMAFKYHYHEVLHTIGNTFTAIFK 345



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H +E +++   + GI      ++      +F+ G PPH G   
Sbjct: 446 YDMFMRGEEILSGAQRIHDAEYLMERAKHHGIDT----SKIAAYIESFRYGCPPHAGGGI 501

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 502 GMERVVMLYLGLDNIRKTSMFP 523


>gi|167536188|ref|XP_001749766.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771693|gb|EDQ85355.1| predicted protein [Monosiga brevicollis MX1]
          Length = 600

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 33/269 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVLCIDGL 76
           V L   VH  R  G + F+ +R      QVV    A    A  +  + +  E ++ I G 
Sbjct: 164 VTLRARVHSKRVTGRLAFVTLRQRTHTVQVVFEENATISKAMIKFIEKLNPESIVNIVGT 223

Query: 77  VMSRSAETINAN------------IITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           V   +    +              ++T  +     +IE  +  E  P+ V       + +
Sbjct: 224 VTEPATPVESCTQRDVEIKGKACFVVTSALPSLPLQIEDAARGENDPMAV------GQDV 277

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSM-RCRMIAENFIECSTP-ILTASSPEGARDFLV 182
           R   R LDLR +  ++ I K    + ++ R  ++ E F E  +P I+ A+S  G+  F +
Sbjct: 278 RLDNRILDLRAEP-NQAIFKLQSGVGALFRNFLLGEGFTEIHSPKIIGAASESGSTVFKL 336

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                 GS   L Q+PQ YKQ+ +A+ F+R F+I P FR ED  + R   EF  +D EM+
Sbjct: 337 EYF---GSPAFLAQSPQLYKQMAIAADFERVFEIGPVFRAEDSNTHRHLTEFTGMDFEMA 393

Query: 243 FVEQ-DDILNTME----NVLRGVFEEFSN 266
           F E   ++L+ ++    ++ +G+ E+F +
Sbjct: 394 FYEHYHEVLDVVDRLFVSIFKGLTEKFGH 422



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+  G EI SG  R H   ++ +  +  G+S + ++        AF+ G PPH G   
Sbjct: 515 YDLMMRGEEIMSGAQRIHDPALLEERATAHGLSLDEIK----AYIDAFRYGCPPHAGGGV 570

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ SLFP
Sbjct: 571 GMERVVMLFLGLPNIRKTSLFP 592


>gi|116494969|ref|YP_806703.1| aspartyl/asparaginyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|227535028|ref|ZP_03965077.1| aspartyl/asparaginyl-tRNA synthetase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|122263613|sp|Q038W1|SYN_LACC3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116105119|gb|ABJ70261.1| asparaginyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|227187343|gb|EEI67410.1| aspartyl/asparaginyl-tRNA synthetase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
          Length = 432

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 108/252 (42%), Gaps = 32/252 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SACFEIAKSVRSEWVLCI 73
           V   V++  W+   R  G I FL +RD     Q VV+  D     F +AK +R E  + I
Sbjct: 14  VNEEVKIGAWLTDKRSSGKITFLQLRDGSAYFQGVVSKADVPEEVFSLAKELRQESSMWI 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++   S             E+  + IE++  + + P+     +E+       +R L L
Sbjct: 74  TGVIHQDSRSHFG-------YEIEVRNIELVGDSHDYPI---SPKEHGIEFLLDHRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIA--------ENFIECSTPILTASSPEGARDFLVPSR 185
           R         KR   I  +R  MI         E FI+   PILT S+PEG  +      
Sbjct: 124 RS--------KRQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEGTTELFETDY 175

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ ++  L Q+ Q Y +   A  + + F   P FR E  ++ R   EF+ ++ EM+F  
Sbjct: 176 FDKKAY--LSQSGQLYAEA-GAMAYGKVFTCGPVFRAEKSKTRRHLTEFWMIEPEMAFCH 232

Query: 246 QDDILNTMENVL 257
           Q++ L   E  +
Sbjct: 233 QEESLKVQERYV 244


>gi|320170631|gb|EFW47530.1| aspartyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 531

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 120/282 (42%), Gaps = 36/282 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVRSEWVLC 72
            G  V L   VH  R  G   FL +R  +    G+  V         +   S+  E  + 
Sbjct: 76  TGKTVLLRARVHNTRGTGKQAFLVLRQRFVTLQGVIFVGPAVSKQMVKFVASLSKESFVD 135

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPL---------PVFG-----E 117
           ++G ++     T   +     IEL   KI  +S A   LP          P+ G      
Sbjct: 136 VEGTIVG--VPTPIESCTLHDIELHVTKIFTVSSAMPRLPFSLDDATNVEPLEGVETTNS 193

Query: 118 REYPES--------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
              PE          R   R +DLR  T       ++ +    R  + ++NFIE  +P +
Sbjct: 194 NSEPEDNLIRVGLDTRLDNRVIDLRTTTNQAIYRLQSAVCLLFREFLTSQNFIEIHSPKI 253

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             ++ E   +    +   Q ++ A  Q+PQ YKQ+ M + F+R F+IAP FR ED  + R
Sbjct: 254 IGTASESGANVFAVTYFKQQAYLA--QSPQFYKQMAMCADFERVFEIAPVFRAEDSNTHR 311

Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMEN----VLRGVFEEFSN 266
              EF  LD+EM+F E   ++L+ ++     + +G+ + ++N
Sbjct: 312 HLTEFVGLDLEMAFYEHYHEVLDMLDKLFVFIFKGLRDRYAN 353



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL   G EI SG  R H   V+L+  +     K +  +       AF+ G PPHGG   
Sbjct: 446 YDLFMRGEEILSGAQRVH-DPVLLEERAK---EKHIEISSIQPYVDAFKYGAPPHGGGGI 501

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++ML LG  N+R  S+FP
Sbjct: 502 GLERVLMLYLGLGNIRRTSMFP 523


>gi|261332072|emb|CBH15065.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 541

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 7/259 (2%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G     +  R+ G V   R  G + F+ +R     +  V    +      K +  E ++ 
Sbjct: 41  GALQSAASARVRGRVENFRVRGKLAFIQLRQPPSHSIQVVAAGAEISHRVKELTPESIVD 100

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFL 131
           + G +  +  E    ++     EL A  IE++S  A  LP P+  +    ++ R   R++
Sbjct: 101 VIGEI--KPTERPVTSVSCSNYELHATSIEVVSKAAVPLPFPLHDQNAKLDT-RLNNRYI 157

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           D+R       I   +    S R ++++ +F+E  TP +  ++ EG           + +F
Sbjct: 158 DMRTPLAVAMIRLVSAAAQSFRTQLLSRDFVELHTPKIIGTASEGGSALFSLDYFGRQAF 217

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDIL 250
            A  Q+PQ YKQ+ +     R F+I P FR E   + R   EF  LD E +  E   ++L
Sbjct: 218 LA--QSPQLYKQMAIMGDGMRVFEIGPVFRAEKSLTHRHLTEFTGLDAEFTVDEFYTELL 275

Query: 251 NTMENVLRGVFEEFSNGNT 269
           + +E++L G+  +    N 
Sbjct: 276 DVLESILCGMIWKLQTENA 294



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 14/111 (12%)

Query: 454 FAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            A  PF TMP    E +         A  +D+   G EI SGG R H    ++ +     
Sbjct: 436 LAARPFYTMPHPSEEGV---------ACGFDMYLRGEEICSGGQRIHDVAQLIHSMEQ-- 484

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             + +          +F+ G  PHGG   G++RIV+ LLGA+++R VSLFP
Sbjct: 485 --RRMEAAHMRDYVDSFRYGAWPHGGFGLGLERIVLFLLGARDIRRVSLFP 533


>gi|227499307|ref|ZP_03929419.1| possible lysine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227218658|gb|EEI83892.1| possible lysine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 632

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 135/283 (47%), Gaps = 27/283 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75
           G  VR++G +   R HG + F+DI+D  G  Q+V   N     F   K      ++ IDG
Sbjct: 52  GKNVRIAGRIMAKRGHGNMSFMDIQDESGQIQIVNRKNVIGDLFSQVKKYDIGDIVGIDG 111

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLR 134
            V   +          G+I +  +   +++ + + LP    G ++  + +R++ R+LDL 
Sbjct: 112 KVFKTN---------QGEISIETETPLLMTKSLQMLPEKWHGLKD--QDLRYRQRYLDLI 160

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
            +   K++ V+R+ II+ +R  +  + F+E  TPIL T +    AR F+          Y
Sbjct: 161 VNPEVKDVFVQRSLIISEIRRFLDGKGFLEVETPILNTIAGGATARPFITHHNSLDIGMY 220

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GFD+ ++I   FR+E   +   P EF  +++  ++ + +D++  
Sbjct: 221 -LRIASELYLKRLIVGGFDKVYEIGRMFRNEGMDATHNP-EFTTMELYQAYADFEDMMEI 278

Query: 253 MENVLRGVFEEFS-------NGNTVSNN--FLRICYDDAIRRY 286
            E ++  V ++         +GN +     + RI   +A++ Y
Sbjct: 279 TETMVEAVAQKVKGKTLVELDGNEIELKAPWKRISMIEAVKEY 321



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M+L G  ++R+V LFP
Sbjct: 446 ALEIGMPPTGGLGIGIDRLIMILTGQHSIRDVLLFP 481


>gi|300783257|ref|YP_003763548.1| nondiscriminating aspartyl-tRNA synthetase [Amycolatopsis
           mediterranei U32]
 gi|299792771|gb|ADJ43146.1| nondiscriminating aspartyl-tRNA synthetase [Amycolatopsis
           mediterranei U32]
          Length = 405

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 38/255 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVLC 72
           VG+ VR++GWVHR R    + F+ +RD  G+ QVV    A P+    E+           
Sbjct: 15  VGARVRVAGWVHRRRRLKSVTFVVVRDRSGLAQVVLRGAAPPEETVVEVHA--------- 65

Query: 73  IDGLVMSRSAETINANI-ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
                      T++AN    G +EL+   +E L  AE +P P    R  P         L
Sbjct: 66  -----------TVSANPRAPGGVELTEPVVETL--AEAVPPPFDLYR--PAVTASLPAIL 110

Query: 132 D-----LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           D     LR   L +        +   R  + +  F E  TP + AS+ E           
Sbjct: 111 DHAPVALRHPALKERFAVAAAAVRGFRSTLDSRGFTEVHTPKIVASATESGGCVFGIDYF 170

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-E 245
            + ++ A  Q+PQ +KQ L+   F+R +++ P FR E   + R   ++  LD+E+ F+ +
Sbjct: 171 GRPAYLA--QSPQFFKQALVGV-FERVYEVGPVFRAEPHDTARHLAQYTSLDVELGFIRD 227

Query: 246 QDDILNTMENVLRGV 260
             D++  +  VL G+
Sbjct: 228 HHDVMAVLREVLAGM 242



 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 54/129 (41%), Gaps = 25/129 (19%)

Query: 444 EWNEEEKKIDF--------AHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
           EW   E   DF        A  PF T P         +         +DL+  G E+ +G
Sbjct: 285 EWARREHGSDFLFVTGYPMAKRPFYTHPDPARPRYSNS---------FDLLFRGVELVTG 335

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           G R H     L    +           +    +AF  GMPPHGG A G++R    LLGA 
Sbjct: 336 GQRLHRHADYLAVLGDAA-------PEYADYLQAFAHGMPPHGGFAIGLERWTARLLGAA 388

Query: 555 NVREVSLFP 563
           NVREV+LFP
Sbjct: 389 NVREVTLFP 397


>gi|237874247|ref|NP_001153873.1| aspartyl-tRNA synthetase [Acyrthosiphon pisum]
          Length = 537

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 29/271 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK---SVRSEWVLCIDGL 76
           V + G +H  R  G   F+ +R      QV+A   D+   +  K   ++  E ++ I G 
Sbjct: 93  VWIRGRLHTSRAKGKQCFMVVRQQQWSIQVLAVVSDTISKQFVKFCSNINKESIVDIKGK 152

Query: 77  VMSRSAETINANIITGQIELSAQKIEILS-VAEELPL-------PVFGEREYPESI---- 124
           V +R+   I  +     +EL  +++ ++S  A +LPL       PV G+ +  + +    
Sbjct: 153 V-TRTPSKI-GSCSQQDVELHIEELWVVSQSANQLPLLIEDASRPVKGDDDEDQGLNIKV 210

Query: 125 ----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   R +DLR             +    R  + A+ F+E  TP +  ++ EG  + 
Sbjct: 211 NQDTRLDNRVIDLRTPANQAIFRLEAGVCKIFRDLLTAKGFVEIHTPKMINAASEGGANV 270

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S   +GS Y L Q+PQ YKQ+ +A  FDR F I   FR ED  + R   EF  LD+E
Sbjct: 271 FTISYF-KGSAY-LAQSPQLYKQMAIAGDFDRVFTIGAVFRAEDSNTYRHLTEFVGLDLE 328

Query: 241 MSFV----EQDDILNTM-ENVLRGVFEEFSN 266
           M+F     E  D++ ++  N+ +G+ + + +
Sbjct: 329 MAFKYHYHEVVDVIGSLFTNIFKGLRDNYQS 359



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  + +++   +  +  E    +      AF+ G PPH G   
Sbjct: 452 YDMFMRGEEILSGAQRIHDFDYLIERAKHHQVDIE----KIAAYIDAFRYGCPPHAGGGI 507

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+VS+FP
Sbjct: 508 GLERVVMLYLGLDNIRKVSMFP 529


>gi|169766764|ref|XP_001817853.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
 gi|238483535|ref|XP_002373006.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus flavus NRRL3357]
 gi|83765708|dbj|BAE55851.1| unnamed protein product [Aspergillus oryzae]
 gi|220701056|gb|EED57394.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus flavus NRRL3357]
          Length = 954

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 128/292 (43%), Gaps = 33/292 (11%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHY----GITQVVANPDS-ACFEIAKS 64
           D+ V  VG  V  +  +H +R     ++FL  R       G+       +S A  +  + 
Sbjct: 139 DISVDSVGKEVLFTARLHIIRRMSAKLVFLVFRQQLYTFQGVLHETPGKNSIAMVQWVEH 198

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP----------- 113
           +R   ++ + G + +     +   I    +EL+   + ++ V  E P+P           
Sbjct: 199 LRVGSIVQVRGTIQAPEVPVLGCTI--HDVELAIDAVHVV-VRREEPVPFSVYEAEIQTP 255

Query: 114 ----VFGEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
               V G R + P+  R   R LDLR  T       ++ + N  R  +  +NFIE  TP 
Sbjct: 256 EEERVEGRRSHIPDRTRLTNRLLDLRTPTSQSIFRIQSAVGNLFRTALDEQNFIEIHTPK 315

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L  S+ E        +   + +F A  Q+PQ  KQ+ +A+ F R ++I   FR E+  + 
Sbjct: 316 LQGSATESGASVFEVNYFGRDAFLA--QSPQLAKQMAIAADFGRVYEIGAVFRAENSNTH 373

Query: 229 RLPGEFYQLDMEMS----FVEQDDILNT-MENVLRGVFEEFSNG-NTVSNNF 274
           R   E+  LD+EM+    + E  ++L+  ++N+L+G++  F     TV   F
Sbjct: 374 RHLTEYTGLDIEMAIEEHYHEMLEVLDAVIKNILKGIYGRFRREIETVKQQF 425



 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H  +++ +    VGI+ + +E    G    F+ G PPH G   
Sbjct: 515 FDIFIRGQEIVSGGQRIHDPQMLEENMRRVGINPDTMEEYMEG----FRWGAPPHAGAGV 570

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R +MLLL   N+R  SLF
Sbjct: 571 GLERFLMLLLKLGNIRLASLF 591


>gi|13541827|ref|NP_111515.1| asparaginyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|20139905|sp|Q979Y4|SYN_THEVO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|14325264|dbj|BAB60168.1| tRNA synthetase Asn [Thermoplasma volcanium GSS1]
          Length = 429

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 120/278 (43%), Gaps = 22/278 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VGS V + GWV+R+R  GG+ F+ IRD  GI Q  A  +    E    + S  +     L
Sbjct: 13  VGSEVSVRGWVYRIRSSGGVTFIVIRDSTGIVQCTAKKNELTPEQYDEISSLGIESSLSL 72

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           + +   E  +    TG  E+S  K  +    +  P+     ++  E      R L LR  
Sbjct: 73  IGTMKKEPRSP---TG-YEISIHKFTVYQKNDVFPI----TKDQGEEFLLDNRHLWLRSR 124

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R+ I  S       + + +  TP + +++ EG           +  F  L Q
Sbjct: 125 EFTSILKVRSTIFRSFADFFYDQGYYQVHTPFMVSTAVEGGSTLFKVDFFGEPIF--LNQ 182

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y + ++ S  ++ F IAP FR E  R+ R   E++  + E+++++  ++++  EN+
Sbjct: 183 SAQFYLETMIYS-LEKVFTIAPSFRAEKSRTRRHLTEYWHAEAEVAWIDNREMMDVEENM 241

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
           +  + +     N          YDD ++  G D   LR
Sbjct: 242 IYYIIQRVIEEN----------YDD-LKLLGRDPEALR 268


>gi|119497261|ref|XP_001265391.1| aspartyl-tRNA synthetase, cytoplasmic [Neosartorya fischeri NRRL
           181]
 gi|119413553|gb|EAW23494.1| aspartyl-tRNA synthetase, cytoplasmic [Neosartorya fischeri NRRL
           181]
          Length = 948

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 32/281 (11%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDS-----ACFEIAKS 64
           D+  S VG  +  +  +H +R     ++FL  R      Q V +        A  + A+ 
Sbjct: 133 DISSSSVGQEIFFTARLHIIRRMSSKLVFLIFRQRLTTFQGVLHEKPGAKSIAMIQWAEH 192

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP----------- 113
           +R   ++ + G+V +     +   I    +EL  ++I ++ V  E P+P           
Sbjct: 193 LRLGSIVRVRGIVQAPQVPVLGCTI--HDVELDVEQIHLV-VHREEPVPFSVYEAEIRTA 249

Query: 114 ----VFGEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
               V G R + P+  R   R LDLR  T       ++ + N  R  +  + FIE  TP 
Sbjct: 250 EEDRVEGRRSHLPDRTRLNNRILDLRTPTSQSIFRLQSALCNIFRSSLDEQGFIEIHTPK 309

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L  ++ E        +   + +F A  Q+PQ  KQ+ +A+ F+R ++I   FR E+  + 
Sbjct: 310 LQGTATESGASVFQVNYFGRDAFLA--QSPQLAKQMAIAADFERVYEIGAVFRAENSNTH 367

Query: 229 RLPGEFYQLDMEMS----FVEQDDILNT-MENVLRGVFEEF 264
           R   E+  LD+EM+    + E  D+L+  ++N+L+GV+  +
Sbjct: 368 RHLTEYTGLDIEMAIEEHYHEMLDVLDAVIKNMLKGVYGRY 408



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H   ++ ++    GI+ +++E+   G    F+ G PPH G   
Sbjct: 509 FDIFIRGQEIVSGGQRIHDPRMLEESMRRSGINPDMMEDYLEG----FRWGAPPHAGAGV 564

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R++MLLL   N+R  SLF
Sbjct: 565 GLERLLMLLLKLGNIRLASLF 585


>gi|310642513|ref|YP_003947271.1| asparaginyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309247463|gb|ADO57030.1| Asparaginyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 431

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 116/285 (40%), Gaps = 31/285 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCI 73
           VG  V +  WV+  R  G I FL +RD  G  Q V        +I   AKS+  E  L +
Sbjct: 14  VGETVTIGAWVNNKRSSGKIQFLQLRDGSGYIQGVIVKSEVSEDIWNDAKSLTQESSLYV 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V                 EL+   IEI+ + E  P+     +E+       +R L L
Sbjct: 74  TGIVREEPRSQSG-------YELTVTGIEIIHLTENYPIT---PKEHGVDFLMDHRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       ++ R  II +++       F +   PILT SS EG  +       ++ ++  
Sbjct: 124 RSAKQRAVLIIRAEIIRAIQEFFNGNGFTKVDPPILTPSSAEGTTELFHIKYFDEDAY-- 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ EM+FV+ ++ L   
Sbjct: 182 LTQSGQLYMEA-AAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVDHEESLRVQ 240

Query: 254 ENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAI 283
           E                 L  +  + S    +   F RI YD+AI
Sbjct: 241 EQFVSHIVQSVLKNCAKELEAIGRDVSKLEQIQGEFPRITYDEAI 285


>gi|300812856|ref|ZP_07093251.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496192|gb|EFK31319.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 432

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 103/243 (42%), Gaps = 16/243 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           VR+  W+   R  G I+FL +RD     Q V   +      FE AK +R E    + G +
Sbjct: 18  VRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEASFYLTGTI 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +             E+    +E++S  E  P+     +E+       +R L LR   
Sbjct: 78  HEDARSHFG-------YEIQISDLEVVSNNEGYPIT---NKEHGIDFLLDHRHLWLRSRR 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R RI  +       E F++   P+L  S+PEG  +       +  ++  L Q+
Sbjct: 128 PFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEGTTELFHIDYFDHDAY--LSQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y ++  A  F + F   P FR E  ++ R   EF+ ++ EM+++ QD+ L+  E  L
Sbjct: 186 GQLYGEV-GAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDESLDLQERFL 244

Query: 258 RGV 260
             V
Sbjct: 245 SYV 247


>gi|195333908|ref|XP_002033628.1| GM21429 [Drosophila sechellia]
 gi|194125598|gb|EDW47641.1| GM21429 [Drosophila sechellia]
          Length = 531

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 25/274 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAK---S 64
             +L V      V + G VH  R  G   FL +R      Q ++A  D    ++ K   +
Sbjct: 77  VSELSVQVGKGLVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGDVISKQMVKFAGN 136

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES 123
           +  E ++ I    ++ S++    +     +ELS ++I ++S A+ +LPL +  +   PE+
Sbjct: 137 IPKESIIDIQAKPVAVSSKI--ESCTEQSLELSVEQIFVISQAKAQLPLQI-EDASRPEN 193

Query: 124 --------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                          R   R LDLR             +    R  +  + F E  TP +
Sbjct: 194 AEDAEGLNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKI 253

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
            +++ EG  +    S     ++  L Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R
Sbjct: 254 ISAASEGGANVFTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHR 311

Query: 230 LPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262
              EF  LD+EM+F     ++L+T+ N    +F+
Sbjct: 312 HLTEFVGLDLEMAFKYHYHEVLHTIGNTFTSIFK 345



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++   + GI      ++      +F+ G PPH G   
Sbjct: 446 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDT----SKIAAYIESFRYGCPPHAGGGI 501

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 502 GMERVVMLYLGLDNIRKTSMFP 523


>gi|271963405|ref|YP_003337601.1| aspartate--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|270506580|gb|ACZ84858.1| Aspartate--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 428

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 103/242 (42%), Gaps = 20/242 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  VRL+GW+HR R    + FL IRD  G+ QVV        E       E VL I G 
Sbjct: 14  VGRHVRLAGWLHRRRDLKSVSFLVIRDRSGLAQVVLGQPVPYPE-------ETVLQISGT 66

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR--FKYRFLDLR 134
           V++            G  EL+   IE+L+ A E P         P ++     +  + LR
Sbjct: 67  VVANPQ-------APGGAELTGPTIEVLAEAVEPPPFDLYRPTVPATLPTVLDHAPVALR 119

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
              L          +   R  +    F+E  TP +  ++ E   +        + +F A 
Sbjct: 120 HPRLRAPFEIAAAGVAGFRAALDGLGFVESQTPKIVGTATESGANVFGIDYFGRPAFLA- 178

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTM 253
            Q+PQ +KQ L+   F+R +++ P FR E   + R   ++  LD E+ FV +  D++  +
Sbjct: 179 -QSPQFFKQALVGV-FERVYEVGPVFRAEPHDTARHLAQYTSLDAELGFVRDHRDVMAVL 236

Query: 254 EN 255
             
Sbjct: 237 RE 238



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G E+ +GG R H     L A +  G   +     + G   AF  GMPPHGG A 
Sbjct: 343 FDLLFRGLELVTGGQRLHRHADYLAALAVRGEDPQA----YAGYLAAFAHGMPPHGGFAI 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R    L GA N+R+ +LFP
Sbjct: 399 GLERWTSRLTGAANIRQTTLFP 420


>gi|325479516|gb|EGC82612.1| lysine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 632

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 141/284 (49%), Gaps = 29/284 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75
           G  VR++G +   R HG + F+DI+D  G  Q+V   N     F+  K      ++ IDG
Sbjct: 52  GKEVRIAGRIMAKRGHGNMSFMDIQDESGQIQIVNRKNVIGEEFKQVKKYDIGDIVGIDG 111

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLR 134
            V   +          G+I +  +K  +++ + + LP    G ++ P+ +R++ R+LDL 
Sbjct: 112 KVFKTNQ---------GEISIETEKPVLMTKSLQILPEKWHGLKD-PD-LRYRQRYLDLI 160

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV-PSRVNQGSF 191
            +   K++ V+R++II+ +R  +    F+E  TPIL T +    AR F    + +N G +
Sbjct: 161 VNPEVKDVFVQRSQIISEIRRFLDGRGFLEVETPILNTIAGGATARPFTTHHNSLNIGMY 220

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +  A + Y + L+  GFD+ ++I   FR+E   +   P EF  +++  ++ + +D++ 
Sbjct: 221 LRI--ASELYLKRLIVGGFDKVYEIGRMFRNEGMDATHNP-EFTTMELYQAYGDFEDMME 277

Query: 252 TMENVLRGVFEEFS-------NGNTVSNN--FLRICYDDAIRRY 286
             E ++  V ++         +GN +     + R+   DA++ Y
Sbjct: 278 ITETMVETVAQKVKGTTVVEFDGNEIELKAPWKRMTMIDAVKEY 321



 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M+L G  ++R+V LFP
Sbjct: 446 ALEVGMPPTGGLGIGIDRLIMILTGQHSIRDVLLFP 481


>gi|260893493|ref|YP_003239590.1| lysyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865634|gb|ACX52740.1| lysyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 489

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCID 74
           G  V L+G +   R HG + F D++D  G  Q++   D+     +EI K +    ++ + 
Sbjct: 52  GQEVSLAGRIMARRSHGKVTFADLQDFSGRIQIMVRQDAVGPEAYEIFKKLDLGDIIGVK 111

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V             TG+I ++  + E+L+ +   PLP          +R++ R+LDL 
Sbjct: 112 GSVFKTR---------TGEITIAVARFELLAKSLR-PLPEKWHGLKDVDLRYRQRYLDLI 161

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFY 192
            +   K I + R++II ++R  +    F+E  TP++        AR F+      +   Y
Sbjct: 162 VNPEVKRIFILRSQIIRAIRRFLDERGFLEVETPMMQPVPGGAAARPFITYHNALEMQLY 221

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  GF++ ++I   FR+E   +   P EF  L++  ++ +  D+L  
Sbjct: 222 -LRIAPELYLKRLLVGGFEKVYEINRNFRNEGISTRHNP-EFTMLELYQAYADYQDMLKL 279

Query: 253 MENVLRGVFEE 263
            E ++  V +E
Sbjct: 280 TEELITWVAKE 290



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 29/39 (74%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + GMPP GG+  GIDR+VMLL  + ++REV LFP+ +
Sbjct: 448 ALEYGMPPAGGLGIGIDRLVMLLTNSPSIREVILFPLHR 486


>gi|282850021|ref|ZP_06259403.1| lysine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282580210|gb|EFB85611.1| lysine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 505

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 25/249 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCID 74
           G  V ++G +  +R HG   F +IRD  G  QV    D      ++  K +    ++ I+
Sbjct: 57  GQPVVIAGRLMTIRSHGKTAFANIRDKSGDIQVYFRKDVLGEEAYKYVKMLDIGDIIGIE 116

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G V             TG++ +   K+ +LS +   PLP          +R++ R++DL 
Sbjct: 117 GHVFKTH---------TGEVTIKVNKLTLLSKSLR-PLPEKWHGLKDTELRYRQRYVDLI 166

Query: 134 ----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
                RDT     VKR++I+  +R  M+ + F+E  TP++ A      AR F+       
Sbjct: 167 VNPEVRDTF----VKRSQIVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALD 222

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  AP+ Y + L+  G DR F++  CFR+E   +   P EF  ++   ++ + +D
Sbjct: 223 IDIY-MRIAPELYLKRLIVGGMDRVFEMNRCFRNEGIDNRHNP-EFTTIESYQAYGDVED 280

Query: 249 ILNTMENVL 257
            +   EN++
Sbjct: 281 AIRLTENLV 289



 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G+PP  G+  GIDR+VM L  + ++R+V LFP+
Sbjct: 454 ALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLFPL 490


>gi|28377778|ref|NP_784670.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|38258538|sp|Q88Y40|SYN1_LACPL RecName: Full=Asparaginyl-tRNA synthetase 1; AltName:
           Full=Asparagine--tRNA ligase 1; Short=AsnRS 1
 gi|28270611|emb|CAD63517.1| asparagine--tRNA ligase [Lactobacillus plantarum WCFS1]
          Length = 431

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 117/282 (41%), Gaps = 32/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G I FL +RD     Q VA  +      F     +  E  L + G +
Sbjct: 17  VKIGVWLSNKRSSGKIAFLQLRDGTATFQGVALKNELGETAFAQLTDLAQETSLWVTGTI 76

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            + +             EL+  + E++  + + P+     +++       +R L LR   
Sbjct: 77  HADTRSPFG-------YELAISQFEVVGTSHDYPIT---PKDHGIDFLLDHRHLWLRSSR 126

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            +  +  R  +I ++        FI+   PILT S+PEG  +        Q ++  L Q+
Sbjct: 127 PNAIMRIRNEVIRAVYEFFNDRGFIKIDAPILTGSAPEGTTELFKTDYFGQDAY--LSQS 184

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A  F + F   P FR E  ++ R   EF+QL+ EM+++ QD+ L   E ++
Sbjct: 185 GQLYGEA-GAMAFGKIFTFGPTFRAEKSKTRRHLTEFWQLEPEMAWMHQDESLEVQEQLV 243

Query: 258 ----RGVFEEFSNGNTVSNN------------FLRICYDDAI 283
               + V +   +   V +             F R+ YDDAI
Sbjct: 244 AYLGQAVIDHCPHELAVLDRDVATLQKYTKLPFPRVSYDDAI 285


>gi|325092841|gb|EGC46151.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 971

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 28/269 (10%)

Query: 17  VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--LCI 73
           +G  V     VH +R     ++F+  R      Q V         +  ++  +WV  + +
Sbjct: 161 IGQEVTFRARVHHIRNMSSKLVFVIFRQQVTTMQGVLAEKPG---VISTLMVQWVERIRV 217

Query: 74  DGLVMSRSAETINANIITG----QIELSAQKIEILSVAEE-LPLPVF------------- 115
             +V  R   + +   +TG     +EL  Q++ ++   E+ +P  V+             
Sbjct: 218 GSIVKVRGVLSSSKVPVTGCTIHDVELDIQELHVVVHREDPIPFSVYEAELLNKDAKNTD 277

Query: 116 GEREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
           G R +  +  R   R LDLR DT       ++ I N  R  + A+ FIE  TP L +S+ 
Sbjct: 278 GRRNHVLDRTRLSNRILDLRTDTSQSIFRIQSAISNLFRAALDAQGFIEIHTPKLQSSAT 337

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           E            + +F A  Q+PQ  KQ+ +A+ F+R ++I   FR E+  + R   E+
Sbjct: 338 ESGASVFEVKYFTREAFLA--QSPQLAKQMAIAADFERVYEIGAVFRAENSNTHRHLTEY 395

Query: 235 YQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
             LD+EM+  E   + L T+++VL+ +F+
Sbjct: 396 TGLDIEMAIEEHYHEALETIDSVLKEIFK 424



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H  +++ Q     GI+   +E    G    F+ G PPH G   
Sbjct: 530 FDIFVRGQEIVSGGQRIHDEKILEQRMKEAGINPLAMEEYLEG----FRWGAPPHAGAGI 585

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R++ML+L   N+R  SLF
Sbjct: 586 GLERLLMLILKLGNIRLASLF 606


>gi|330797835|ref|XP_003286963.1| hypothetical protein DICPUDRAFT_31743 [Dictyostelium purpureum]
 gi|325083055|gb|EGC36518.1| hypothetical protein DICPUDRAFT_31743 [Dictyostelium purpureum]
          Length = 506

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 125/305 (40%), Gaps = 54/305 (17%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSAC----FEIA 62
           S G L  S VG  V +   +   R  G  + FL +R+     Q V      C     + A
Sbjct: 14  SIGSLDESKVGQKVLIRARIATSRLQGANLCFLQLREKLFTVQAVIAKGGVCSKSMVKFA 73

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-------- 114
             +  E ++ I+G +        +A      +EL    + ++S A++LP+ +        
Sbjct: 74  GDITRESIVDIEGTISKTQVPIESAT--QKNVELHVTSLFVVSEAQQLPILLEDLSRNQA 131

Query: 115 --------------------FGEREYPE----------------SIRFKYRFLDLRRDTL 138
                                   E  E                S R + R+LDLR    
Sbjct: 132 LLDQQDSEINEISRLLENTSLTNEEKEELTAKKSAASRYVNVGLSQRLQNRYLDLRVPAN 191

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                 ++ +    R  + A++F E  +P + +++ E           N  ++  L Q+P
Sbjct: 192 LSIFRIQSAVCALFREFLSAKDFTEIHSPKIISTASESGASVFKLGYFNTHAY--LAQSP 249

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257
           Q YKQ+ +AS FDR F+IAP FR E+  + R   EF  LDMEM+F +   ++L+T++ ++
Sbjct: 250 QFYKQMAIASDFDRVFEIAPVFRAENSNTHRHLTEFVGLDMEMAFKDHYHEVLDTLDEMM 309

Query: 258 RGVFE 262
             +F+
Sbjct: 310 CFIFK 314



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL   G EI SG  R H ++++ +   + GI+   +++       +F+ G   H G   
Sbjct: 421 YDLFMRGEEICSGAQRIHDAKLLEENAKHHGINVADIQSYID----SFKFGCSQHAGGGV 476

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ SLFP
Sbjct: 477 GLERVVMLYLGIFNIRKTSLFP 498


>gi|115447981|ref|NP_001047770.1| Os02g0686400 [Oryza sativa Japonica Group]
 gi|41052719|dbj|BAD07576.1| putative aspartate-tRNA ligase [Oryza sativa Japonica Group]
 gi|113537301|dbj|BAF09684.1| Os02g0686400 [Oryza sativa Japonica Group]
 gi|215704413|dbj|BAG93847.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222623467|gb|EEE57599.1| hypothetical protein OsJ_07966 [Oryza sativa Japonica Group]
          Length = 549

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 30/262 (11%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ--VVANPDSAC----FEIA 62
           G L  +  G  V + G    +RP    + F+ +R+     Q  +VA+ D+         A
Sbjct: 90  GGLDEAAAGRSVLIRGAAQAIRPVSKKMAFVVLRESMSTVQCVLVASADAGVSTQMVRFA 149

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPV------- 114
            S+  E ++ ++G+V S   E + A   T Q+E+  +KI  ++ A   LP+ +       
Sbjct: 150 TSLSKESIVDVEGVV-SLPKEPLKAT--TQQVEIQVRKIYCINRAIPTLPINLEDASRSE 206

Query: 115 --------FGER--EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
                    GE+     +  R  YR +DLR          + ++ N  R   +++NF+  
Sbjct: 207 AEIEKAEQAGEKLVRVGQDTRLNYRAIDLRTPANQAIFRIQCQVENKFREYFLSKNFVGI 266

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            +P L A S EG            G    L Q+PQ YKQ+ +  GF+R F++ P FR E+
Sbjct: 267 HSPKLIAGSSEGGAAVF--KLQYNGQPACLAQSPQLYKQMAICGGFERVFEVGPVFRAEN 324

Query: 225 PRSDRLPGEFYQLDMEMSFVEQ 246
             + R   EF  LD EM   E 
Sbjct: 325 SNTHRHLCEFVGLDAEMEIKEH 346



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H+ E++ +  +  GI    + +       +F  G PPHGG   
Sbjct: 464 FDVFIRGEEIISGAQRIHLPELLTKRATECGIDASTISSYI----ESFSYGAPPHGGFGV 519

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML     N+R+ SLFP
Sbjct: 520 GLERVVMLFCALNNIRKTSLFP 541


>gi|225562887|gb|EEH11166.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 971

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 28/269 (10%)

Query: 17  VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--LCI 73
           +G  V     VH +R     ++F+  R      Q V         +  ++  +WV  + +
Sbjct: 161 IGQEVTFRARVHHIRNMSSKLVFVIFRQQVTTMQGVLAEKPG---VISTLMVQWVERIRV 217

Query: 74  DGLVMSRSAETINANIITG----QIELSAQKIEILSVAEE-LPLPVF------------- 115
             +V  R   + +   +TG     +EL  Q++ ++   E+ +P  V+             
Sbjct: 218 GSIVKVRGVLSSSKVPVTGCTIHDVELDIQELHVVVHREDPIPFSVYEAELLNKDAKNTD 277

Query: 116 GEREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
           G R +  +  R   R LDLR DT       ++ I N  R  + A+ FIE  TP L +S+ 
Sbjct: 278 GRRNHVLDRTRLSNRILDLRTDTSQSIFRIQSAISNLFRAALDAQGFIEIHTPKLQSSAT 337

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           E            + +F A  Q+PQ  KQ+ +A+ F+R ++I   FR E+  + R   E+
Sbjct: 338 ESGASVFEVKYFTREAFLA--QSPQLAKQMAIAADFERVYEIGAVFRAENSNTHRHLTEY 395

Query: 235 YQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
             LD+EM+  E   + L T+++VL+ +F+
Sbjct: 396 TGLDIEMAIEEHYHEALETIDSVLKEIFK 424



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H  +++ Q     GI+   +E    G    F+ G PPH G   
Sbjct: 530 FDIFVRGQEIVSGGQRIHDEKILEQRMKEAGINPLAMEEYLEG----FRWGAPPHAGAGI 585

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R++ML+L   N+R  SLF
Sbjct: 586 GLERLLMLILKLGNIRLASLF 606


>gi|191638480|ref|YP_001987646.1| asparaginyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|301066535|ref|YP_003788558.1| aspartyl/asparaginyl-tRNa synthetase [Lactobacillus casei str.
           Zhang]
 gi|190712782|emb|CAQ66788.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS)
           [Lactobacillus casei BL23]
 gi|300438942|gb|ADK18708.1| Aspartyl/asparaginyl-tRNA synthetase [Lactobacillus casei str.
           Zhang]
 gi|327382514|gb|AEA53990.1| Asparaginyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327385711|gb|AEA57185.1| Asparaginyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 432

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 108/252 (42%), Gaps = 32/252 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SACFEIAKSVRSEWVLCI 73
           V   V++  W+   R  G I FL +RD     Q VV+  D     F +AK +R E  + I
Sbjct: 14  VNEEVKIGAWLTDKRSSGKIAFLQLRDGSAYFQGVVSKADVPEEVFSLAKELRQESSMWI 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++   S             E+  + IE++  + + P+     +E+       +R L L
Sbjct: 74  TGVIHQDSRSHFG-------YEIEVRNIELVGDSHDYPI---SPKEHGIEFLLDHRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIA--------ENFIECSTPILTASSPEGARDFLVPSR 185
           R         KR   I  +R  MI         E FI+   PILT S+PEG  +      
Sbjct: 124 RS--------KRQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEGTTELFETDY 175

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ ++  L Q+ Q Y +   A  + + F   P FR E  ++ R   EF+ ++ EM+F  
Sbjct: 176 FDKKAY--LSQSGQLYAEA-GAMAYGKVFTCGPVFRAEKSKTRRHLTEFWMIEPEMAFCH 232

Query: 246 QDDILNTMENVL 257
           Q++ L   E  +
Sbjct: 233 QEESLKVQERYV 244


>gi|160878794|ref|YP_001557762.1| aspartyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160427460|gb|ABX41023.1| aspartyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 445

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 127/281 (45%), Gaps = 25/281 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L G+VH VR      FL IR   GI Q V + +    ++  S++    + + G V   
Sbjct: 28  VVLRGFVHTVRDMSEFSFLVIRTFEGIIQCVTSTE-VTKDVVASLKEGMTVEVQGEVHEE 86

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR----RD 136
                   II  ++ + ++     +    +PLP+  + +   S+  K   L LR    R+
Sbjct: 87  LRAPNGYEIILTRLLILSEP----AKDSTMPLPI-SKWKLNTSLEAK---LSLRPIALRN 138

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              + I K +  I+   R  + +E+F E  TP + A + EG  +        + +F A  
Sbjct: 139 IRERAIFKIQEGIVRGFRDFLFSEHFTEVRTPKIVAGNAEGGANVFKLEYFGKKAFLA-- 196

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTME 254
           Q+PQ YKQ  M   +DR F+ AP FR E   + R   E+  LD EM +++  +DI+N   
Sbjct: 197 QSPQFYKQT-MVGVYDRVFEAAPVFRAEKHNTTRHLNEYTSLDFEMGYIDSFEDIMNMET 255

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-PDLR 294
            +L  +FE       +S ++ + C    I    TDK P +R
Sbjct: 256 AMLTFIFE------LLSKDYKKECEILGINLPKTDKIPAVR 290



 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EI +GG R H  E  +    + G++ E  E+         + GMPPHGG
Sbjct: 357 TLSFDLLFKGMEITTGGQRIHNYEEQVAKMKDRGMNIEDFEHYL----MIHKHGMPPHGG 412

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M LL   NVRE SLFP
Sbjct: 413 LGIGLERLTMRLLEEANVRETSLFP 437


>gi|51892720|ref|YP_075411.1| asparaginyl-tRNA synthetase [Symbiobacterium thermophilum IAM
           14863]
 gi|59798516|sp|Q67P26|SYN_SYMTH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|51856409|dbj|BAD40567.1| asparaginyl-tRNA synthetase [Symbiobacterium thermophilum IAM
           14863]
          Length = 437

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 114/284 (40%), Gaps = 30/284 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74
           G  V L GWV   R  G I F+  RD  G+ Q V    +     FE  K +  E  + I 
Sbjct: 14  GQTVELRGWVQNYRSSGKIQFIIFRDGTGVCQAVLFIKDVPPEVFEAGKRLTQESSIIIR 73

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V          +   G  E+  Q +EI+ +AEE P+    ++E+       +R L +R
Sbjct: 74  GSVR-------KDDRAPGGYEIGVQDLEIVQIAEEYPI---TKKEHGTEFLMDHRHLWIR 123

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +     +  R  I  ++   +    F+   +PIL  ++ EG       + VN    Y L
Sbjct: 124 SNRQVAILRIRNEITMAIHQFLQENGFVLTESPILMGTAAEGGATLFETTYVNDEPAY-L 182

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q + +   A    R +   P FR E  ++ R   EF+ ++ E ++   +D +   E
Sbjct: 183 SQSGQLHVE-ATAMALGRVYTFGPTFRAEKSKTRRHLIEFWMVEPEAAYFTHEDNMRLQE 241

Query: 255 N----VLRGVFEEFSNG-----------NTVSNNFLRICYDDAI 283
                V+R V E  S               V   F RI Y +A+
Sbjct: 242 EMVTYVVRRVLERRSKELQLIGRDTTLLEKVEPPFPRITYTEAV 285



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 12/93 (12%)

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           G DLL+ + +         EI  G  R H  E++ + F   G+      N +G  Y   +
Sbjct: 349 GADLLAPEGYG--------EIIGGSQRIHDPELLKRRFEEHGLDM----NTYGWYYDLRR 396

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G  PH G   GI+R V  + G ++VRE   FP
Sbjct: 397 FGSVPHSGFGLGIERTVAWICGLEHVRETIPFP 429


>gi|282891418|ref|ZP_06299917.1| hypothetical protein pah_c161o033 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498703|gb|EFB41023.1| hypothetical protein pah_c161o033 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 602

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+C G EI SGG R H  E M++      + KE+    F      F+ GMPPHGG   
Sbjct: 351 FDLLCAGTEITSGGQRRHTYESMVEGI----LEKEMDPANFEDYLSIFKYGMPPHGGFGM 406

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RI M +L  KN+RE SLFP
Sbjct: 407 GLERITMTILRLKNIRECSLFP 428



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 13/243 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L GW++  RP G + FL +RD  G  Q+V   D   ++   +++   +L I G V   
Sbjct: 17  VILRGWLNNTRPFGKLNFLILRDRSGFAQIVIQ-DKEVWKKINALQPGSILKIVGKVADA 75

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
               +   I+  +I++     ++  V    P  +  + +Y       +R + LR   +  
Sbjct: 76  PQAELGVEIVDPKIDIEVPVTDVPPVDYYKPT-IQSDLDYI----LDHRPIALRNRQIQA 130

Query: 141 NIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA-LPQAP 198
               +  I ++ R  M      +E   P +  +S EG  +F     V+   + A L Q+ 
Sbjct: 131 IFKIQAEITHAFRLFMHDVVRAVEYFAPNIIGASSEGGAEFF---NVDYFGYTATLAQSS 187

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257
           Q YKQ+++    +R F + P FR E+ ++ R   E  Q + EM F E   ++++  E  +
Sbjct: 188 QLYKQIMVGVN-ERVFALMPFFRAENSQTTRHLAEGKQFEFEMGFFENWHEVMDVQEGCI 246

Query: 258 RGV 260
           + +
Sbjct: 247 KAI 249


>gi|32491190|ref|NP_871444.1| hypothetical protein WGLp441 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|31340438|sp|Q8D2B3|SYK_WIGBR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|25166397|dbj|BAC24587.1| lysS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 493

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 117/228 (51%), Gaps = 14/228 (6%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           T ++ +  +K+ +L+ + + P P   +    + I ++ R+LDL  +   +N  K R+ II
Sbjct: 121 TEELSVKCKKLYVLTKSVK-PFPNKFQGLLNQEICYRKRYLDLITNKKSRNTFKTRSIII 179

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
           N++R  MI ENF+E  TP++      G     +    +      L  AP+ Y + L+  G
Sbjct: 180 NNIRKFMIKENFVEVETPMMHNIPGGGLSKPFITHHSSLNIDLYLRIAPELYLKQLIVGG 239

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
           F++ F+I   FR+E   S+  P EF  ++  +++++ +D++  +EN+L  + ++  N N 
Sbjct: 240 FEKIFEINRNFRNEGLSSNHNP-EFTMMEFYVAYIDYEDLMKIVENLLNYIVDKIFNKNK 298

Query: 270 VS-NNFL--------RICYDDAIRRY--GTDKPDLRNPIIMHNVTEHF 306
           ++ NNF+        +I   D+I  Y     + D+ +  I+ ++ + F
Sbjct: 299 INYNNFMINFEKPFKKISMQDSICEYCKNVTQSDISDIKIITDIAKSF 346



 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 26/40 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + + G+PP  G   GIDR+VM+L    ++++V LFP  +N
Sbjct: 451 SLEYGLPPTAGCGIGIDRLVMILTNNYSIKDVILFPTLRN 490


>gi|116492342|ref|YP_804077.1| asparaginyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|116102492|gb|ABJ67635.1| asparaginyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 464

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 129/320 (40%), Gaps = 44/320 (13%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D    V ++GW+  +R    I FL+I D   I  V    D+   E ++ +R   +     
Sbjct: 16  DADVEVEVTGWLKTIRSSKKISFLEINDGSYIKNVQVIMDNNALENSEEIRKAAIYSTIK 75

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +V  + A+T  A       E+ A  I IL  +     P+  +   PE +R +   L  R 
Sbjct: 76  VV-GKVADTPKAK---QPFEIQASSITILGSSNS-DYPLQKKEHTPEFLR-EQAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           +T +     R+ +  ++   + + NF+  +TPI+T+S  EGA +    + ++        
Sbjct: 130 NTFYAVFRIRSLVSFAVHQFLQSNNFVYVNTPIITSSDTEGAGEMFKVTTLDLNNLPKNE 189

Query: 188 ------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+  P       QL     A  F   +   P FR E+  + R   EF+ ++
Sbjct: 190 AGEVDSSKDFFKQPTNLTVSGQLNAEAFALAFRNVYTFGPAFRAENSHTTRHASEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLRI 277
            EM+F    DI+NT E++L+ V            EF NG            T   +F R+
Sbjct: 250 PEMAFANLQDIMNTSEDLLKYVVNYLLENAKEELEFLNGAVDPELKARLEATKDADFARV 309

Query: 278 CYDDAIRRYGTDKPDLRNPI 297
            Y +AI        +  NP+
Sbjct: 310 SYTEAIDILMNADQEFENPV 329


>gi|218191378|gb|EEC73805.1| hypothetical protein OsI_08509 [Oryza sativa Indica Group]
          Length = 549

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 30/262 (11%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ--VVANPDSAC----FEIA 62
           G L  +  G  V + G    +RP    + F+ +R+     Q  +VA+ D+         A
Sbjct: 90  GGLDEAAAGRSVLIRGAAQAIRPVSKKMAFVVLRESMSTVQCVLVASADAGVSTQMVRFA 149

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPV------- 114
            S+  E ++ ++G+V S   E + A   T Q+E+  +KI  ++ A   LP+ +       
Sbjct: 150 TSLSKESIVDVEGVV-SLPKEPLKAT--TQQVEIQVRKIYCINRAIPTLPINLEDASRSE 206

Query: 115 --------FGER--EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
                    GE+     +  R  YR +DLR          + ++ N  R   +++NF+  
Sbjct: 207 AEIEKAEQAGEKLVRVGQDTRLNYRAIDLRTPANQAIFRIQCQVENKFREYFLSKNFVGI 266

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            +P L A S EG            G    L Q+PQ YKQ+ +  GF+R F++ P FR E+
Sbjct: 267 HSPKLIAGSSEGGAAVF--KLQYNGQPACLAQSPQLYKQMAICGGFERVFEVGPVFRAEN 324

Query: 225 PRSDRLPGEFYQLDMEMSFVEQ 246
             + R   EF  LD EM   E 
Sbjct: 325 SNTHRHLCEFVGLDAEMEIKEH 346



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H+ E++ +  +  GI    + +       +F  G PPHGG   
Sbjct: 464 FDVFIRGEEIISGAQRIHLPELLTKRATECGIDASTISSYI----ESFSYGAPPHGGFGV 519

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML     N+R+ SLFP
Sbjct: 520 GLERVVMLFCALNNIRKTSLFP 541


>gi|21228018|ref|NP_633940.1| lysyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|39932430|sp|Q8PVP6|SYK2_METMA RecName: Full=Lysyl-tRNA synthetase 2; AltName: Full=Lysine--tRNA
           ligase 2; Short=LysRS 2
 gi|20906448|gb|AAM31612.1| Lysyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 511

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 139/288 (48%), Gaps = 33/288 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKS-VRSEWVLC 72
           G  VR +G ++ +R HG +IF D+ D  G  QV+      PD   FEI K+ V S  ++ 
Sbjct: 72  GLTVRTAGRLYNIRKHGKMIFADLGDQAGRVQVLVRKGNLPDEE-FEIFKNLVDSGDIIG 130

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFL 131
           + G +              G+  +S  +  +LS +   LP    G ++     R++ R+L
Sbjct: 131 VQGDLFRTK---------RGENSISVSEFSLLSKSLCALPEKFHGLKDV--ETRYRKRYL 179

Query: 132 DLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSR-VNQ 188
           DL  +   + I V R+++I+ +R  +    F+E  TPIL T      AR F      + Q
Sbjct: 180 DLIVNAEKREIFVMRSKLISEIRRFLTDREFLEFETPILQTVYGGANARPFTTFHNCLGQ 239

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             F  +  AP+ Y + L+  G+++ F+I   FR+ED  +   P EF  +++  ++ + +D
Sbjct: 240 NLFLRI--APELYLKRLVVGGYEKVFEICKNFRNEDIDTTHNP-EFTMIEVYEAYRDYND 296

Query: 249 ILNTMENV-------LRGVFEEFSNGNTVS--NNFLRICYDDAIRRYG 287
           +++  E++       L G +E      T++  + + RI  +DA++ Y 
Sbjct: 297 MMDLTESLVSELVFKLTGSYEVQMGEKTINLRSPWKRISMEDALKEYA 344



 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 14/92 (15%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---------YRAFQC 531
           +++L  NG+E+A+G      SE+           ++  + + G L           A   
Sbjct: 419 RFELFLNGWELANG-----YSELNDPLEQEKRFEEQDKKRKLGDLEAQTVDYDFINALGY 473

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP GG+  GIDR+ M+L G ++++EV LFP
Sbjct: 474 GLPPTGGMGLGIDRLTMILSGLESIKEVILFP 505


>gi|312879332|ref|ZP_07739132.1| asparaginyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310782623|gb|EFQ23021.1| asparaginyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 434

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 124/293 (42%), Gaps = 28/293 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V L GW++  R  G I FL IRD  G  Q V    +   E  ++ +  W   I+  V
Sbjct: 16  GQEVTLKGWIYNKRSSGKIHFLQIRDGSGFIQGVMERTAVPEETFQAAKGLW---IEASV 72

Query: 78  MSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
             R     +    +G  ELS   + ++S   EE P+    ++E+        R L LR  
Sbjct: 73  EVRGTVRRDERAPSG-FELSVSDLVVVSNPVEEYPIT---KKEHGIDFLLDNRHLWLRSH 128

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R R+I S R  +    F+   +PILT S  EGA         +QG  Y L Q
Sbjct: 129 RQQAILKIRDRVILSCRTYLHDRGFLLVDSPILTGSIGEGADGLFELDYFDQGKAY-LAQ 187

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
             Q Y +   A+ + R +   P FR E  ++ R   EF+ ++ E +F +  D +   E++
Sbjct: 188 TGQLYLEAAAAA-YGRVYCFGPTFRAEKSKTRRHLTEFWMIEPEAAFFDHKDNMALQEDL 246

Query: 257 LRGVFEE----------FSNGNT-----VSNNFLRICYDDAI---RRYGTDKP 291
           +  V  +          F   +T     +   F  I YD+A+   ++ G+D P
Sbjct: 247 VCHVVAQVLEHCRPELAFLERDTSLLERIVPPFPHITYDEAVGILQKLGSDIP 299


>gi|322418305|ref|YP_004197528.1| asparaginyl-tRNA synthetase [Geobacter sp. M18]
 gi|320124692|gb|ADW12252.1| asparaginyl-tRNA synthetase [Geobacter sp. M18]
          Length = 460

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 110/260 (42%), Gaps = 29/260 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDG 75
           GS + + GW   VR   G+ F+ + D   ++  QVVA PD + +E    + +   L + G
Sbjct: 16  GSTILVKGWARTVRNGKGVTFISLNDGSCLSGIQVVAEPDLSNYEEVTGIGTGSALAVTG 75

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           L+    A         GQ +EL AQ +E++  A++   P+  +R   E +R     L +R
Sbjct: 76  LLQESPA--------AGQDLELKAQSLEVVGGADQ-EYPMQKKRHSFEYLR-TIAHLRVR 125

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVPSRV 186
            +T       R+ +   +        F+   TPI+TA+  EGA         D   P  V
Sbjct: 126 SNTFGAVFRVRSALAQEVHRFFAERGFLYVHTPIITANDCEGAGELFRVTTLDLAHPPLV 185

Query: 187 N-----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           N        F+A         QL   L A  F   +   P FR E+  + R   EF+ ++
Sbjct: 186 NGEIDFSEDFFATATGLTVSGQLEGELFAQAFSDIYTFGPTFRAENSNTARHAAEFWMIE 245

Query: 239 MEMSFVEQDDILNTMENVLR 258
            EM+F +  D  +  E  L+
Sbjct: 246 PEMAFADLSDDADLAEAFLK 265



 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    E++ Q     G++ E +           + G  PH G   G 
Sbjct: 377 LVPKVGEIIGGSQREERLELLEQRMLETGVAPESL----SWYLDTRRWGSTPHAGFGLGF 432

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R++M L G +N+R+V  FP +
Sbjct: 433 ERLLMYLTGMENIRDVVPFPRT 454


>gi|308179952|ref|YP_003924080.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|308045443|gb|ADN97986.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 431

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 117/282 (41%), Gaps = 32/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77
           V++  W+   R  G I FL +RD     Q VA  +      F     +  E  L + G +
Sbjct: 17  VKIGVWLSNKRSSGKIAFLQLRDGTATFQGVALKNELGETAFAQLTDLAQETSLWVTGTI 76

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            + +             EL+  + E++  + + P+     +++       +R L LR   
Sbjct: 77  HADTRSPFG-------YELAISQFEVVGTSHDYPIT---PKDHGIDFLLDHRHLWLRSSR 126

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            +  +  R  +I ++        FI+   PILT S+PEG  +        Q ++  L Q+
Sbjct: 127 PNAIMRIRNEVIRAVYEFFNDRGFIKIDAPILTGSAPEGTTELFKTDYFGQDAY--LSQS 184

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN-- 255
            Q Y +   A  F + F   P FR E  ++ R   EF+QL+ EM+++ QD+ L   E   
Sbjct: 185 GQLYGEA-GAMAFGKIFTFGPTFRAEKSKTRRHLTEFWQLEPEMAWMHQDESLEVQEQLV 243

Query: 256 --VLRGVFEEFSNGNTVSNN------------FLRICYDDAI 283
             +++ V +   +   V +             F R+ YDDAI
Sbjct: 244 AYLVQAVIDHCPHELAVLDRDVATLQKYTKLPFPRVLYDDAI 285


>gi|4512034|gb|AAD21582.1| aspartyl tRNA synthetase [Drosophila melanogaster]
          Length = 531

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 25/263 (9%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAK---SVRSEWVLCIDG 75
            V + G VH  R  G   FL +R      Q ++A  D    ++ K   ++  E ++ I  
Sbjct: 88  LVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGDVISKQMVKFAGNIPKESIIDIQA 147

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES----------- 123
             ++ S++    +     +ELS ++I ++S A+ +LPL +  +   PE+           
Sbjct: 148 KPVAVSSKI--ESCTEQSLELSVEQIFVISQAKAQLPLQI-EDASRPENADDAEGLNIRV 204

Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   R LDLR             +    R  +  + F E  TP + +++ EG  + 
Sbjct: 205 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAASEGGANV 264

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S     ++  L Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF  LD+E
Sbjct: 265 FTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLE 322

Query: 241 MSF-VEQDDILNTMENVLRGVFE 262
           M+F     ++L+T+ N    +F+
Sbjct: 323 MAFKYHYHEVLHTIGNTFTSIFK 345



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++   + GI      ++      +F+ G PPH G   
Sbjct: 446 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDT----SKIAAYIESFRYGCPPHAGGGI 501

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+ P
Sbjct: 502 GMERVVMLYLGLDNIRKTSMLP 523


>gi|298709437|emb|CBJ31343.1| Aspartyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 614

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 124/311 (39%), Gaps = 32/311 (10%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ----VVANPDSACFEIAKSV 65
           GDL  +  G  + L   VH  R     +FL +R      Q    V  N      + A+ V
Sbjct: 154 GDLTSAKAGEEIWLRARVHTSRSIKKGVFLVLRQALYTVQATVFVGGNVGRPMVQYAEDV 213

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--- 122
             E V+ + G ++   +    +     ++EL  ++I ++S A+     +  +   P+   
Sbjct: 214 SKESVIDVRGTLVVTPSPV--SGCTQKEVELKIEEIHVVSAADTFMPVIVADAMRPDRTP 271

Query: 123 -----------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
                              R  YR++DLR          ++ +    R  + ++ F+E  
Sbjct: 272 EEEEKQEKEGKAPTVAADTRLDYRWIDLRTPANQAIFKIQSAVCQYFRANLASKGFVEIH 331

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA-SGFDRYFQIAPCFRDED 224
           +P L A + EG  +    +    G+   L Q+PQ YKQ+  A  GF R  ++ P FR E 
Sbjct: 332 SPKLLAGASEGGSEVFTTNYF--GTEACLAQSPQLYKQMAAACGGFGRVMEVGPVFRAEK 389

Query: 225 PRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
            R+ R   EF  LD EM   E   ++L    ++   +F+E +         +R  +    
Sbjct: 390 SRTHRHLCEFTGLDFEMVIKEHYFEVLEVFSDLFINIFDEVNRNCKEELEAVRTQHPFED 449

Query: 284 RRYGTDKPDLR 294
            RY   +P LR
Sbjct: 450 LRYA--RPTLR 458



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 4/88 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H  E + +      I  + + +       AF+ G  PHGG   
Sbjct: 529 FDIFIRGEEIVSGAQRIHDLEFLKERAREHDIPLDSIMSYLD----AFKHGAEPHGGGGI 584

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G++R+VML LG KN+R+ S+FP     C
Sbjct: 585 GLERVVMLFLGLKNIRKTSMFPRDPKRC 612


>gi|195485180|ref|XP_002090983.1| Aats-asp [Drosophila yakuba]
 gi|194177084|gb|EDW90695.1| Aats-asp [Drosophila yakuba]
          Length = 531

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 117/263 (44%), Gaps = 25/263 (9%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD---SACFEIAKSVRSEWVLCIDG 75
            V + G VH  R  G   FL +R      Q ++A  D       + A ++  E ++ I  
Sbjct: 88  LVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVNDFISKQMVKFAGNIPKESIIDIQA 147

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES----------- 123
             ++ S++    +     +ELS ++I ++S A+ +LPL +  +   PE+           
Sbjct: 148 KPVAVSSKI--ESCTEQSLELSVEQIFVISQAKAQLPLQI-EDASRPENADDAEGLNIRV 204

Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   R LDLR             +    R  +  + F E  TP + +++ EG  + 
Sbjct: 205 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAASEGGANV 264

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S     ++  L Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF  LD+E
Sbjct: 265 FTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLE 322

Query: 241 MSF-VEQDDILNTMENVLRGVFE 262
           M+F     ++L+T+ N    +F+
Sbjct: 323 MAFKYHYHEVLHTIGNTFTAIFK 345



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++   + GI      ++      +F+ G PPH G   
Sbjct: 446 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDT----SKIAAYIESFRYGCPPHAGGGI 501

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 502 GMERVVMLYLGLDNIRKTSMFP 523


>gi|212539668|ref|XP_002149989.1| aspartyl-tRNA synthetase, cytoplasmic [Penicillium marneffei ATCC
           18224]
 gi|210067288|gb|EEA21380.1| aspartyl-tRNA synthetase, cytoplasmic [Penicillium marneffei ATCC
           18224]
          Length = 951

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 26/273 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEI-----AKS 64
           D+    +G  V  +  +H +R     ++FL  R      Q V + +     +     A+ 
Sbjct: 137 DISTDLIGKEVTFTARLHIIRNISAKLVFLVFRQQLTTFQGVLHAEEGKKSLGMVHWAER 196

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFG------- 116
           +R+  ++ + G++ S +   + +      IELS +++ ++   E  +P  V+        
Sbjct: 197 LRTGTIVRVRGIMQSPAVPVLGSTY--HDIELSIEQLHVVVRREASVPFSVYEAEIRTEE 254

Query: 117 ----EREY---PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
               E  Y   P+  R   R LDLR  T       ++ + N  R  +    FIE  TP L
Sbjct: 255 EDHVEGRYSHIPDRTRLSNRILDLRTGTAQAIFRLQSAVGNLWRAALDERGFIEIHTPKL 314

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             S+ E        +   + +F  L Q+PQ  KQ+ +AS FDR ++I   FR E+  + R
Sbjct: 315 QGSATESGASVFQLNYFGRPAF--LAQSPQLAKQMAIASDFDRVYEIGAVFRAENSNTHR 372

Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVF 261
              E+  LD+EM+  E   ++L T++ VLR + 
Sbjct: 373 HLTEYTGLDIEMAIEEHYHEMLETIDAVLRNII 405



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H   ++ +    VGI    +E+   G    F+ G PPH G   
Sbjct: 513 FDMFVRGQEIVSGGQRIHDPTMLEENMKKVGIDPSAMEDYLEG----FRWGAPPHAGAGV 568

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R VMLLL   N+R  SLF
Sbjct: 569 GLERFVMLLLKLGNIRLASLF 589


>gi|17136276|ref|NP_476609.1| Aspartyl-tRNA synthetase [Drosophila melanogaster]
 gi|7303387|gb|AAF58445.1| Aspartyl-tRNA synthetase [Drosophila melanogaster]
 gi|17944217|gb|AAL48003.1| GM14334p [Drosophila melanogaster]
 gi|220944800|gb|ACL84943.1| Aats-asp-PA [synthetic construct]
 gi|220954640|gb|ACL89863.1| Aats-asp-PA [synthetic construct]
          Length = 531

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 25/263 (9%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAK---SVRSEWVLCIDG 75
            V + G VH  R  G   FL +R      Q ++A  D    ++ K   ++  E ++ I  
Sbjct: 88  LVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGDVISKQMVKFAGNIPKESIIDIQA 147

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES----------- 123
             ++ S++    +     +ELS ++I ++S A+ +LPL +  +   PE+           
Sbjct: 148 KPVAVSSKI--ESCTEQSLELSVEQIFVISQAKAQLPLQI-EDASRPENADDAEGLNIRV 204

Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   R LDLR             +    R  +  + F E  TP + +++ EG  + 
Sbjct: 205 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAASEGGANV 264

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S     ++  L Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF  LD+E
Sbjct: 265 FTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLE 322

Query: 241 MSF-VEQDDILNTMENVLRGVFE 262
           M+F     ++L+T+ N    +F+
Sbjct: 323 MAFKYHYHEVLHTIGNTFTSIFK 345



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++   + GI      ++      +F+ G PPH G   
Sbjct: 446 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDT----SKIAAYIESFRYGCPPHAGGGI 501

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 502 GMERVVMLYLGLDNIRKTSMFP 523


>gi|94676799|ref|YP_588620.1| lysyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|123384151|sp|Q1LTU4|SYK_BAUCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|94219949|gb|ABF14108.1| lysyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 506

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 138/301 (45%), Gaps = 26/301 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L+G +   R  G   F+ ++D  G  Q+  +  +           +W L     V  R
Sbjct: 69  VSLAGRMINRRIMGKASFVILQDSGGTIQLYLSSKNLSDSFYNEHFKKWDLGDILGVHGR 128

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +T      TG++ ++  +I +L+ A   P+P        + IR++ R+LDL  +    
Sbjct: 129 LFKTK-----TGELTINCNEIILLTKALR-PIPNKFHGIVDKQIRYRQRYLDLITNKNSF 182

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N+ K R++II  +R  +  E+FIE  TPIL  S P GA  R F+        + Y L  A
Sbjct: 183 NLFKTRSQIITEIRQFLNKEDFIEVETPIL-QSLPGGATARPFITYHNALDMNLY-LRIA 240

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF++ F+I   FR+E   +   P EF  +++ +++ +  D++   +N+L
Sbjct: 241 PELYLKQLIIGGFEKIFEINRNFRNEGLSAHHNP-EFTMMELYIAYADYHDVMLLTQNLL 299

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
                     NT++N+ L       I +YG  K D     +   + E   H   ++ SK 
Sbjct: 300 ----------NTITNHVL----GTNIIQYGNLKLDFSKNFVKMTMKEAICHYNKQILSKH 345

Query: 318 L 318
           L
Sbjct: 346 L 346



 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VMLL  +  +R+V LFP
Sbjct: 465 ALEHGLPPTAGLGIGIDRLVMLLTNSHFIRDVILFP 500


>gi|294793384|ref|ZP_06758529.1| lysine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294455815|gb|EFG24180.1| lysine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 505

 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 116/246 (47%), Gaps = 19/246 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +  +R HG   F +IRD  G  QV    D    E  K V+   +L I G +
Sbjct: 57  GQPVVIAGRLMTIRSHGKTAFANIRDKSGDIQVYFRKDVLGEEAYKYVK---MLDI-GDI 112

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---- 133
           +         +  TG++ +   K+ +LS +   PLP          +R++ R++DL    
Sbjct: 113 IGVEGHVFKTH--TGEVTIKVNKLTLLSKSLR-PLPEKWHGLKDTELRYRQRYVDLIVNP 169

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             RDT     VKR++I+  +R  M+ + F+E  TP++ A      AR F+          
Sbjct: 170 EVRDTF----VKRSQIVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALDIDI 225

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y +  AP+ Y + L+  G DR F++  CFR+E   +   P EF  ++   ++ + +D + 
Sbjct: 226 Y-MRIAPELYLKRLIVGGMDRVFEMNRCFRNEGIDNRHNP-EFTTIESYQAYGDVEDAIR 283

Query: 252 TMENVL 257
             EN++
Sbjct: 284 LTENLV 289



 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G+PP  G+  GIDR+VM L  + ++R+V LFP+
Sbjct: 454 ALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLFPL 490


>gi|294101384|ref|YP_003553242.1| asparaginyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616364|gb|ADE56518.1| asparaginyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 434

 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 121/285 (42%), Gaps = 31/285 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCID 74
           G  V + GW++  R  G I FL +RD  G  Q   V        FE AK +  E  + ++
Sbjct: 16  GESVTIKGWMYNKRSSGKIHFLQLRDGTGTVQGVMVKREVSEEAFENAKRLWLEASVEVE 75

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRFLDL 133
           G V       ++    +G +EL+   ++++ +  EE P+   G++++        R L L
Sbjct: 76  GTV------RLDERAPSG-VELTVTGLKVIQNPDEEYPI---GKKDHGIDFLLDNRHLWL 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R R+I + R  +  E F+   +PILT S  EGA              Y 
Sbjct: 126 RSSRQQAIMRIRERVIWAAREYLHNEGFMLIDSPILTGSIGEGASGLFELDYFENDKAY- 184

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +   A+ F + +   P FR E  ++ R   EF+ L+ E++F + D  +   
Sbjct: 185 LAQTGQLYAEAAAAA-FGKVYCFGPTFRAEKSKTRRHLTEFWMLEPEVAFYDHDLNIKLQ 243

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283
           EN++  + E               + S    V   F RI YD AI
Sbjct: 244 ENLVAYIVEHVLLHCKNELESLGRDLSKLEKVKPPFYRITYDKAI 288


>gi|239631431|ref|ZP_04674462.1| asparaginyl-tRNA synthetase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|239525896|gb|EEQ64897.1| asparaginyl-tRNA synthetase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
          Length = 432

 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 108/252 (42%), Gaps = 32/252 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SACFEIAKSVRSEWVLCI 73
           V   V++  W+   R  G I FL +RD     Q VV+  D     F +AK +R E  + I
Sbjct: 14  VNEEVKIGAWLTDKRSSGKIAFLQLRDGSAYFQGVVSKADVPEDVFSLAKELRQESSMWI 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++   S             E+  + IE++  + + P+     +E+       +R L L
Sbjct: 74  TGVIHQDSRSHFG-------YEIEVRNIELVGDSHDYPI---SPKEHGIEFLLDHRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIA--------ENFIECSTPILTASSPEGARDFLVPSR 185
           R         KR   I  +R  MI         E FI+   PILT S+PEG  +      
Sbjct: 124 RS--------KRQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEGTTELFETDY 175

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ ++  L Q+ Q Y +   A  + + F   P FR E  ++ R   EF+ ++ EM+F  
Sbjct: 176 FDKKAY--LSQSGQLYAEA-GAMAYGKVFTCGPVFRAEKSKTRRHLTEFWMIEPEMAFCH 232

Query: 246 QDDILNTMENVL 257
           Q++ L   E  +
Sbjct: 233 QEESLKVQERYV 244


>gi|50419493|ref|XP_458273.1| DEHA2C13684p [Debaryomyces hansenii CBS767]
 gi|59798687|sp|Q6BU46|SYNC_DEBHA RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|49653939|emb|CAG86350.1| DEHA2C13684p [Debaryomyces hansenii]
          Length = 552

 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 11/248 (4%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           ++G+ V + GW+HR+R   G+ F+ +RD  G  Q +   D A  +    +  E  + I G
Sbjct: 125 NIGTRVVVQGWIHRLRLQKGLGFITLRDGTGFIQCILTGDLAKCKTTHELTLESTVTIKG 184

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLD 132
            V+++  E  +A    G +EL     E++ +A   EE       E   P S+    R L 
Sbjct: 185 -VINKLPEGKSA---PGGVELKVDYYEVVGLAPSGEEAFSNKVQENADP-SLLLDQRHLA 239

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR ++L   +  R+ ++ ++R     E  +E + P +  +  EG           + ++ 
Sbjct: 240 LRGESLSAVMKVRSTLLQAIRRFFAEEGLLEVTPPCMVQTQVEGGSTLFKMDYYGEEAY- 298

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  + +  D  F +   FR E   + R   E+  ++ E+ F+E DD+L  
Sbjct: 299 -LTQSSQLYLETCLPALGD-VFCVQESFRAEKSHTRRHLSEYTHIESELGFIEFDDLLTH 356

Query: 253 MENVLRGV 260
           +E ++  V
Sbjct: 357 LERLITYV 364


>gi|324503664|gb|ADY41587.1| Aspartyl-tRNA synthetase [Ascaris suum]
          Length = 534

 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 105/242 (43%), Gaps = 21/242 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVLCI 73
           G  + + G +H  R  G   F+ +R      Q +            +   ++  E ++ +
Sbjct: 92  GKEIWVRGRLHTSRSKGKTCFIVVRQRVHTVQAMLFVGEKVSKQMLKYVSNISKESIIDV 151

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF-GEREYPES-------- 123
            G+V     E ++       +EL   ++ ++S AE  LPL +    R   E+        
Sbjct: 152 RGVVRKVDEEIVSCT--QKDVELHVTQLHVVSTAEPRLPLQIEDASRAQDETSGLSTVNL 209

Query: 124 -IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFL 181
             R   R LDLR  T       +  +    R  +    F E  TP I++A+S  GA  F 
Sbjct: 210 DTRLDNRVLDLRTPTSQAIFRIQDGVCELFRNTLKKRGFTEIHTPKIISAASEGGANVFE 269

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           V     +GS Y L Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF  LD+EM
Sbjct: 270 VS--YFKGSAY-LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLEM 326

Query: 242 SF 243
           +F
Sbjct: 327 AF 328



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 42/84 (50%), Gaps = 8/84 (9%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           YD+   G EI SG  R H   ++ Q   F N+ + K            AF+ G PPH G 
Sbjct: 449 YDMFMRGEEILSGAQRIHDPTLLTQRAKFHNIDLEK------IRAYVDAFRFGCPPHAGG 502

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             G++R+ ML LG  NVR  SLFP
Sbjct: 503 GIGLERVTMLFLGLGNVRLASLFP 526


>gi|269797573|ref|YP_003311473.1| lysyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094202|gb|ACZ24193.1| lysyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 506

 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 25/249 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCID 74
           G  V ++G +  +R HG   F +IRD  G  QV    D      ++  K +    ++ ++
Sbjct: 57  GQPVVIAGRLMTIRSHGKTAFANIRDKSGDIQVYFRKDVLGEEAYKYVKMLDIGDIIGVE 116

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G V             TG++ +   K+ +LS +   PLP          +R++ R++DL 
Sbjct: 117 GHVFKTH---------TGEVTIKVNKLTLLSKSLR-PLPEKWHGLKDTELRYRQRYVDLI 166

Query: 134 ----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
                RDT     VKR++I+  +R  M+ + F+E  TP++ A      AR F+       
Sbjct: 167 VNPEVRDTF----VKRSQIVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALD 222

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  AP+ Y + L+  G DR F++  CFR+E   +   P EF  ++   ++ + +D
Sbjct: 223 IDIY-MRIAPELYLKRLIVGGMDRVFEMNRCFRNEGIDNRHNP-EFTTIESYQAYGDVED 280

Query: 249 ILNTMENVL 257
            +   EN++
Sbjct: 281 AIRLTENLV 289



 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G+PP  G+  GIDR+VM L  + ++R+V LFP+
Sbjct: 454 ALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLFPL 490


>gi|294943905|ref|XP_002784004.1| aspartate--tRNA ligase, putative [Perkinsus marinus ATCC 50983]
 gi|239897008|gb|EER15800.1| aspartate--tRNA ligase, putative [Perkinsus marinus ATCC 50983]
          Length = 366

 Score = 75.1 bits (183), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 118/259 (45%), Gaps = 31/259 (11%)

Query: 30  VRPHGGII-FLDIRDHYGITQVVA-NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINA 87
            R  GG + F+ +R   G  QVV    D A F  A ++  E V+ + G V +   E I +
Sbjct: 110 TRKQGGKLSFVTLRQGLGTVQVVVFGGDIAKF--AGNLSKESVVDLYGTV-TVPEEPIRS 166

Query: 88  NIITGQIELSAQKIEILSVAEELPLPVFGEREYPES-------------IRFKYRFLDLR 134
                ++EL A++I  +S A+ LPL  F + E  E+              R   R +DLR
Sbjct: 167 TT-QSEVELQAERIFCISRAQALPLQ-FEDLERTEADVEAGEGARVSLDTRLDNRVIDLR 224

Query: 135 RDTLHKNIVKRTRIINSMRCR--MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             T     + R +   SM  R  +I +  +E  TP L  ++ EG  D        + ++ 
Sbjct: 225 --TKANQAILRVQSGVSMLFREFLIQKGLVEIHTPKLLGAASEGGADVFKVQYFERNAY- 281

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-----D 247
            L Q+PQ YKQ+ + +     F+I P FR E   + R   EF  LDMEM F +      D
Sbjct: 282 -LAQSPQLYKQMALMTDLPGVFEIGPVFRAEKSLTFRHMTEFVGLDMEMRFADNYHEVLD 340

Query: 248 DILNTMENVLRGVFEEFSN 266
            I  T +++  G+ E FS+
Sbjct: 341 VIDGTFDHIFHGLNERFSS 359


>gi|324503201|gb|ADY41394.1| Aspartyl-tRNA synthetase [Ascaris suum]
          Length = 509

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 105/242 (43%), Gaps = 21/242 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVLCI 73
           G  + + G +H  R  G   F+ +R      Q +            +   ++  E ++ +
Sbjct: 67  GKEIWVRGRLHTSRSKGKTCFIVVRQRVHTVQAMLFVGEKVSKQMLKYVSNISKESIIDV 126

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF-GEREYPES-------- 123
            G+V     E ++       +EL   ++ ++S AE  LPL +    R   E+        
Sbjct: 127 RGVVRKVDEEIVSCT--QKDVELHVTQLHVVSTAEPRLPLQIEDASRAQDETSGLSTVNL 184

Query: 124 -IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFL 181
             R   R LDLR  T       +  +    R  +    F E  TP I++A+S  GA  F 
Sbjct: 185 DTRLDNRVLDLRTPTSQAIFRIQDGVCELFRNTLKKRGFTEIHTPKIISAASEGGANVFE 244

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           V     +GS Y L Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF  LD+EM
Sbjct: 245 VS--YFKGSAY-LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLEM 301

Query: 242 SF 243
           +F
Sbjct: 302 AF 303



 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 42/84 (50%), Gaps = 8/84 (9%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           YD+   G EI SG  R H   ++ Q   F N+ + K            AF+ G PPH G 
Sbjct: 424 YDMFMRGEEILSGAQRIHDPTLLTQRAKFHNIDLEK------IRAYVDAFRFGCPPHAGG 477

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             G++R+ ML LG  NVR  SLFP
Sbjct: 478 GIGLERVTMLFLGLGNVRLASLFP 501


>gi|94971623|ref|YP_593671.1| asparaginyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
 gi|122986019|sp|Q1IHQ3|SYN_ACIBL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|94553673|gb|ABF43597.1| asparaginyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 442

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 31/303 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSA 57
           M +    +  ++G  D G  V + GW++ +R  G ++F   RD  G+ Q V    N    
Sbjct: 1   MEQAPVSTIHEIGKHD-GQSVTIKGWLYNLRESGKLLFPIFRDGTGLLQGVLFKKNVSPE 59

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG 116
            F++ K++  E  + + G V +            G  E+    +E++  V E  P P+  
Sbjct: 60  LFDLVKNLTQESSVIVTGNVRAEQR-------APGGYEMDVTALEVVQRVPENEPYPI-T 111

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +E+      ++R L +R       +  R  I+ S       + F     PILT ++ EG
Sbjct: 112 PKEHGIEFLMEHRHLWVRSQRQAAILRIRGEIVRSAHEFFDKQGFTLTEPPILTPAACEG 171

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                        +F  L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ 
Sbjct: 172 TSTLFPVDYFGDPAF--LTQSGQLYIEA-TAMALGKVYSFGPTFRAEKSKTRRHLTEFWM 228

Query: 237 LDMEMSFVEQDDILNTMEN----VLRGVFE-----------EFSNGNTVSNNFLRICYDD 281
           ++ E++F E DDI+   E+    +++ V E           + S    +   F RI YD+
Sbjct: 229 VEPEVAFAELDDIMKLAEDFITHIVKSVLERRRDDLKTIERDLSKLENIDTPFPRISYDE 288

Query: 282 AIR 284
           A++
Sbjct: 289 AVQ 291


>gi|321261513|ref|XP_003195476.1| aspartate--tRNA ligase [Cryptococcus gattii WM276]
 gi|317461949|gb|ADV23689.1| Aspartate--tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 884

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 103/199 (51%), Gaps = 11/199 (5%)

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           E ++ + G  +    + I A + T  +EL  +++ ++  + ++P  +      P+S R +
Sbjct: 165 EAIVQVSG-TLREPPKPITAAVDT-PLELDIERLYLVETSHDIPFNLAHGDRPPQSTRLR 222

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-GARDFLVPSRV 186
            R LDLR  T       R +++   R  +    F+E +TP L  S+ E GA  F    RV
Sbjct: 223 NRTLDLRHPTTQAIFKIRAKVLKVFRDTLDDLGFLEINTPKLQPSATESGAEVF----RV 278

Query: 187 NQ-GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           N  G    L Q+PQ  KQ+ +++ F R ++I P FR E+  + R   E+  LD+EM+ ++
Sbjct: 279 NYFGRKAFLAQSPQLMKQMAISADFRRVYEIGPVFRAENSNTHRHLTEYTGLDIEMT-IQ 337

Query: 246 QD--DILNTMENVLRGVFE 262
           Q+  ++   ++ +LR +F+
Sbjct: 338 QEYYEVFRVLDIILRNIFK 356



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI +GG R +  + + ++    GI+    E+      +AF  GMPPHGG   
Sbjct: 452 FDMFIRGQEICTGGQRINDPKKLRESMEESGIN----EDEMAEYLQAFDWGMPPHGGAGL 507

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++RIV   L   +VR  +L+
Sbjct: 508 GVERIVTFFLNLPDVRLSTLW 528


>gi|195582903|ref|XP_002081265.1| GD10925 [Drosophila simulans]
 gi|194193274|gb|EDX06850.1| GD10925 [Drosophila simulans]
          Length = 531

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 25/263 (9%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAK---SVRSEWVLCIDG 75
            V + G VH  R  G   FL +R      Q ++A  D    ++ K   ++  E ++ I  
Sbjct: 88  LVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGDVISKQMVKFAGNIPKESIIDIQA 147

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES----------- 123
             ++ S++    +     +ELS ++I ++S A+ +LPL +  +   PE+           
Sbjct: 148 KPVAVSSKI--ESCTEQSLELSVEQIFVISQAKAQLPLQI-EDASRPENAEDAEGLNIRV 204

Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   R LDLR             +    R  +  + F E  TP + +++ EG  + 
Sbjct: 205 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPKIISAASEGGANV 264

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S     ++  L Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF  LD+E
Sbjct: 265 FTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLE 322

Query: 241 MSF-VEQDDILNTMENVLRGVFE 262
           M+F     ++L+T+ N    +F+
Sbjct: 323 MAFKYHYHEVLHTIGNTFTSIFK 345



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++   + GI      ++      +F+ G PPH G   
Sbjct: 446 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDT----SKIAAYIESFRYGCPPHAGGGI 501

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 502 GMERVVMLYLGLDNIRKTSMFP 523


>gi|150018414|ref|YP_001310668.1| lysyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149904879|gb|ABR35712.1| lysyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 508

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 128/299 (42%), Gaps = 33/299 (11%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           Y    C +    D      L+G +  +R  G   F +I D  G  Q+  +     S  + 
Sbjct: 51  YTKEICDNFDTIDESKVFSLAGRIMFLRRMGNATFANIVDERGNIQIFFSKKLIGSENYN 110

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGERE 119
           + K +    ++ ++G V             TG+I + A K E+LS +   LP    G ++
Sbjct: 111 VLKLIDVGDIVGVEGTVFKTQ---------TGEITIRANKFELLSKSIRTLPEKYHGIQD 161

Query: 120 YPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
               +R ++R LD+  ++ + +  +KR++ I ++R  +   NFIEC TP+L      G A
Sbjct: 162 --SDLRQRHRSLDMIMNSDVKERFIKRSKAITAIREYLNNMNFIECDTPVLDTKYGGGEA 219

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F           Y +  +P+ Y + L+  G +R +  A  FR+E       P EF  +
Sbjct: 220 KPFKTFVNDLDCEVY-MNVSPELYLKRLIVGGIERVYTFARSFRNEGIDRTHYP-EFTLM 277

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +  MS+ + +D++  ME +   VF   +    +              +YG ++ D + P
Sbjct: 278 ECYMSYADYEDMMRIMEGIYEHVFMSVNGSTKI--------------KYGEEEIDFKAP 322



 Score = 44.7 bits (104), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A    MPP GG+  GIDR++M L G+  +++V  FP+
Sbjct: 469 AIDTAMPPTGGLGIGIDRMIMFLTGSNTIKDVIAFPL 505


>gi|302666150|ref|XP_003024677.1| aspartate-tRNA ligase, putative [Trichophyton verrucosum HKI 0517]
 gi|291188744|gb|EFE44066.1| aspartate-tRNA ligase, putative [Trichophyton verrucosum HKI 0517]
          Length = 947

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 3/143 (2%)

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           P+  R   R LDLR DT       ++ I    R  + A+NFIE  +P L A++ E     
Sbjct: 260 PDRTRLSNRILDLRTDTSQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQAAATESGASV 319

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R   E+  LD+E
Sbjct: 320 FGVNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIE 377

Query: 241 MSFVEQ-DDILNTMENVLRGVFE 262
           M+  E   + L  +++VL+ +F+
Sbjct: 378 MAIEEHYHEALEVLDSVLKSIFK 400



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +D+   G EI SGG R H  +++ +    VGI    +E    G    F+ G PPH G
Sbjct: 504 TLSFDIFVRGQEIVSGGQRIHHPDLLDKRMREVGIDPSTIEEYMEG----FKWGAPPHAG 559

Query: 539 IAAGIDRIVMLLLGAKNVREVSLF 562
              G++R++ML+L   N+R  SLF
Sbjct: 560 AGIGLERLLMLILKLGNIRLGSLF 583


>gi|302500634|ref|XP_003012310.1| aspartate-tRNA ligase, putative [Arthroderma benhamiae CBS 112371]
 gi|291175868|gb|EFE31670.1| aspartate-tRNA ligase, putative [Arthroderma benhamiae CBS 112371]
          Length = 947

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 3/143 (2%)

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           P+  R   R LDLR DT       ++ I    R  + A+NFIE  +P L A++ E     
Sbjct: 260 PDRTRLSNRILDLRTDTSQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQAAATESGASV 319

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R   E+  LD+E
Sbjct: 320 FGVNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIE 377

Query: 241 MSFVEQ-DDILNTMENVLRGVFE 262
           M+  E   + L  +++VL+ +F+
Sbjct: 378 MAIEEHYHEALEVLDSVLKSIFK 400



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +D+   G EI SGG R H  +++ +    VGI    +E    G    F+ G PPH G
Sbjct: 504 TLSFDIFVRGQEIVSGGQRIHHPDLLDKRMREVGIDPSTMEEYMEG----FKWGAPPHAG 559

Query: 539 IAAGIDRIVMLLLGAKNVREVSLF 562
              G++R++ML+L   N+R  SLF
Sbjct: 560 AGIGLERLLMLILKLGNIRLGSLF 583


>gi|326477742|gb|EGE01752.1| aspartyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 947

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 3/143 (2%)

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           P+  R   R LDLR DT       ++ I    R  + A+NFIE  +P L A++ E     
Sbjct: 260 PDRTRLSNRILDLRTDTSQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQAAATESGASV 319

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R   E+  LD+E
Sbjct: 320 FGVNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIE 377

Query: 241 MSFVEQ-DDILNTMENVLRGVFE 262
           M+  E   + L  +++VL+ +F+
Sbjct: 378 MAIEEHYHEALEVLDSVLKSIFK 400



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +D+   G EI SGG R H  +++ +    VGI    +E    G    F+ G PPH G
Sbjct: 504 TLSFDIFVRGQEIVSGGQRIHHPDLLDKRMREVGIDPSTMEEYMEG----FKWGAPPHAG 559

Query: 539 IAAGIDRIVMLLLGAKNVREVSLF 562
              G++R++ML+L   N+R  SLF
Sbjct: 560 AGIGLERLLMLILKLGNIRLGSLF 583


>gi|327398508|ref|YP_004339377.1| Lysyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181137|gb|AEA33318.1| Lysyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 503

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 129/271 (47%), Gaps = 25/271 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D+  +V+++G V   R  G   FL ++D  G  QV A   S     F++ K +    +
Sbjct: 58  LEDLCKYVKVAGRVMAYRSFGKAGFLKLKDFTGTIQVYAEKKSLSEDDFKLYKKLDIGDI 117

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G +             TG++ + A++I +L+ +   PLP        + +R++ R+
Sbjct: 118 IGVEGELFKTK---------TGELTVKAKRIVMLTKSLR-PLPEKWHGLKDKELRYRQRY 167

Query: 131 LDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQ 188
           +DL   D   + +++R+ IIN++R  MI   FIE  TP+L    +   A+ F+       
Sbjct: 168 VDLIVNDQTRQMVIERSLIINAVREFMIKSRFIEVETPMLHKLVTGAAAKPFVTHLNALD 227

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            + Y L  AP+ Y + L+  G +R F+I   FR+E       P EF  ++  +++ + + 
Sbjct: 228 MTLY-LRIAPELYLKRLVVGGLERIFEINRNFRNEGMDLKHNP-EFTMMEFYIAYKDYNF 285

Query: 249 ILNTMENVLRGVFEEFS--------NGNTVS 271
           +++  E +   + ++          +GNT+ 
Sbjct: 286 LMDFTEELFEYILDKLGIDDRKIEFDGNTID 316



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 29/41 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +A + G+PP  G   GIDR+VMLL G  ++R+V LFP+ ++
Sbjct: 459 KALEYGLPPTAGEGIGIDRLVMLLTGNSSIRDVILFPLMRD 499


>gi|294795203|ref|ZP_06760337.1| lysine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294453995|gb|EFG22370.1| lysine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 505

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 25/249 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCID 74
           G  V ++G +  +R HG   F +IRD  G  QV    D      ++  K +    ++ ++
Sbjct: 57  GQPVVIAGRLMTIRSHGKTAFANIRDKSGDIQVYFRKDVLGEDAYKYVKMLDIGDIIGVE 116

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G V             TG++ +   K+ +LS +   PLP          +R++ R++DL 
Sbjct: 117 GHVFKTH---------TGEVTIKVNKLTLLSKSLR-PLPEKWHGLKDTELRYRQRYVDLI 166

Query: 134 ----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
                RDT     VKR++I+  +R  M+ + F+E  TP++ A      AR F+       
Sbjct: 167 VNPEVRDTF----VKRSQIVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALD 222

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  AP+ Y + L+  G DR F++  CFR+E   +   P EF  ++   ++ + +D
Sbjct: 223 IDIY-MRIAPELYLKRLIVGGMDRVFEMNRCFRNEGIDNRHNP-EFTTIESYQAYGDVED 280

Query: 249 ILNTMENVL 257
            +   EN++
Sbjct: 281 AIRLTENLV 289



 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G+PP  G+  GIDR+VM L  + ++R+V LFP+
Sbjct: 454 ALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLFPL 490


>gi|326473276|gb|EGD97285.1| aspartyl-tRNA synthetase, cytoplasmic [Trichophyton tonsurans CBS
           112818]
          Length = 947

 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 3/143 (2%)

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           P+  R   R LDLR DT       ++ I    R  + A+NFIE  +P L A++ E     
Sbjct: 260 PDRTRLSNRILDLRTDTSQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQAAATESGASV 319

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R   E+  LD+E
Sbjct: 320 FGVNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIE 377

Query: 241 MSFVEQ-DDILNTMENVLRGVFE 262
           M+  E   + L  +++VL+ +F+
Sbjct: 378 MAIEEHYHEALEVLDSVLKSIFK 400



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +D+   G EI SGG R H  +++ +    VGI    +E    G    F+ G PPH G
Sbjct: 504 TLSFDIFVRGQEIVSGGQRIHHPDLLDKRMREVGIDPSTMEEYMEG----FKWGAPPHAG 559

Query: 539 IAAGIDRIVMLLLGAKNVREVSLF 562
              G++R++ML+L   N+R  SLF
Sbjct: 560 AGIGLERLLMLILKLGNIRLGSLF 583


>gi|289741863|gb|ADD19679.1| class II lysyl-tRNA synthetase [Glossina morsitans morsitans]
          Length = 566

 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 124/252 (49%), Gaps = 27/252 (10%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPD-----SACFEI-AKSVRSEWVLCI 73
           + ++G VH +R  G  +IF D+R      QV+AN       +A FEI    +R   ++ I
Sbjct: 98  LSIAGRVHAIRESGAKLIFYDLRGEGVKLQVMANAKLYGSGTAAFEIDTNKIRRGDIVGI 157

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132
           +G           A    G++ +  Q+I++LS     LP   FG ++  +  R++ R+LD
Sbjct: 158 NGFP---------AKTKKGELSIVPQEIKLLSPCLHMLPHLHFGLKD--KETRYRQRYLD 206

Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP-SRVNQ 188
           L   + + +N   R ++I+ +R  +    F+E  TP++    P GA  + F+   + +N 
Sbjct: 207 LILNNKVRENFHTRAKVISYIRQFLDGMGFLEIETPMMNMI-PGGATAKPFITHHNELNM 265

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             F  +  AP+ Y ++L+  GFDR ++I   FR+E       P EF   +  M++ +  D
Sbjct: 266 DLFMRI--APELYHKMLIVGGFDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYMAYADYHD 322

Query: 249 ILNTMENVLRGV 260
           I+   E ++ G+
Sbjct: 323 IMEITEQMVSGM 334



 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 509 ALEYGLPPTGGWGMGIDRLTMFLTDSNNIKEVLLFP 544


>gi|224087415|ref|XP_002308157.1| predicted protein [Populus trichocarpa]
 gi|222854133|gb|EEE91680.1| predicted protein [Populus trichocarpa]
          Length = 530

 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 122/282 (43%), Gaps = 30/282 (10%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQ--VVANPDSACFEIAK--- 63
           GDL        V + G     R  G  + F+ +R+     Q  V A PD    ++ K   
Sbjct: 72  GDLTHELKEKEVLIRGRAQTTRAVGKNMAFVVVREKGFTVQCVVTARPDVVSKQMVKFAA 131

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPV----FGER 118
            +  E ++ I G+V   S  +I     T Q+E+   K+  +  A   LP+ +      E+
Sbjct: 132 GLSRESIVDIHGVV---SVPSIAIKGTTQQVEIQVSKLYCVDKAMPTLPINIEDASRSEK 188

Query: 119 EYPESI-------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
           E  E++             R  YR LD R          + ++ N  R  +++E+F+E  
Sbjct: 189 EIEEALEAGEQLVRVNQDTRLNYRVLDFRTSANQGIFRIQCQVCNIFRQFLLSEDFVEIH 248

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP L A S EG           Q +   L Q+PQ +KQ+ +   F R F+I P FR ED 
Sbjct: 249 TPKLIAGSSEGGSAVFKLDYKGQAA--CLAQSPQLHKQMAICGDFGRVFEIGPVFRAEDS 306

Query: 226 RSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
            + R   EF  LD+EM   +   ++++ ++++   +F+  + 
Sbjct: 307 YTHRHLCEFTGLDVEMEIKQHYTEVMDIVDHLFVTMFDHLNK 348



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H+ E +++     GI    +         +F+ G PPHGG  A
Sbjct: 445 FDVFIRGEEIISGAQRVHVPEFLVERAQACGIDVSTISTYID----SFRYGAPPHGGFGA 500

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML  G  N+R+ SLFP
Sbjct: 501 GLERVVMLFCGLNNIRKTSLFP 522


>gi|313894590|ref|ZP_07828153.1| lysine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313440780|gb|EFR59209.1| lysine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 507

 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 25/249 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCID 74
           G  V ++G +  +R HG   F ++RD  G  QV    D      ++  K +    ++ ++
Sbjct: 57  GQPVVIAGRLMTIRSHGKTAFANVRDKSGDIQVYFRKDVLGEDAYKYVKMLDIGDIIGVE 116

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G V             TG++ +   K+ +LS +   PLP          +R++ R++DL 
Sbjct: 117 GHVFKTH---------TGEVTIKVNKLTLLSKSLR-PLPEKWHGLKDTELRYRQRYVDLI 166

Query: 134 ----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
                RDT     VKR++I+  +R  M+ + F+E  TP++ A      AR F+       
Sbjct: 167 VNPEVRDTF----VKRSQIVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALD 222

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  AP+ Y + L+  G DR F++  CFR+E   +   P EF  ++   ++ + +D
Sbjct: 223 IDIY-MRIAPELYLKRLIVGGMDRVFEMNRCFRNEGIDNRHNP-EFTTIESYQAYGDVED 280

Query: 249 ILNTMENVL 257
            +   EN++
Sbjct: 281 AIRLTENLV 289



 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G+PP  G+  GIDR+VM L  + ++R+V LFP+
Sbjct: 454 ALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLFPL 490


>gi|327296545|ref|XP_003232967.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326465278|gb|EGD90731.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 947

 Score = 74.7 bits (182), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 3/143 (2%)

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           P+  R   R LDLR DT       ++ I    R  + A+NFIE  +P L A++ E     
Sbjct: 260 PDRTRLSNRILDLRTDTSQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQAAATESGASV 319

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R   E+  LD+E
Sbjct: 320 FGVNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIE 377

Query: 241 MSFVEQ-DDILNTMENVLRGVFE 262
           M+  E   + L  +++VL+ +F+
Sbjct: 378 MAIEEHYHEALEVLDSVLKSIFK 400



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +D+   G EI SGG R H  +++ +    VGI    +E    G    F+ G PPH G
Sbjct: 504 TLSFDIFVRGQEIVSGGQRIHHPDLLDKRMREVGIDPSTMEEYMEG----FKWGAPPHAG 559

Query: 539 IAAGIDRIVMLLLGAKNVREVSLF 562
              G++R++ML+L   N+R  SLF
Sbjct: 560 AGIGLERLLMLILKLGNIRLGSLF 583


>gi|229552288|ref|ZP_04441013.1| asparagine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539697|ref|YP_003174196.1| asparaginyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|229314360|gb|EEN80333.1| asparagine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257151373|emb|CAR90345.1| Asparaginyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 432

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 108/252 (42%), Gaps = 32/252 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SACFEIAKSVRSEWVLCI 73
           V   V +  W+   R  G I FL +RD     Q VV+  D     F++AK +R E  + I
Sbjct: 14  VNEEVTIGAWLTDKRSSGKIAFLQLRDGSAYFQGVVSKADVPDEVFQLAKELRQESSMWI 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++   S             E+  + IE++  + + P+     +E+       +R L L
Sbjct: 74  TGVIHQDSRSHFG-------YEIEVRNIELVGDSHDYPI---TPKEHGIEFLLDHRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIA--------ENFIECSTPILTASSPEGARDFLVPSR 185
           R         KR   I  +R  MI         E FI+   PILT S+PEG  +      
Sbjct: 124 RS--------KRQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEGTTELFETDY 175

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ ++  L Q+ Q Y +   A  + + F   P FR E  ++ R   EF+ ++ EM+F  
Sbjct: 176 FDKKAY--LSQSGQLYAEA-GAMAYGKVFTCGPVFRAEKSKTRRHLTEFWMIEPEMAFCH 232

Query: 246 QDDILNTMENVL 257
           Q++ L   E  +
Sbjct: 233 QEESLKVQERYV 244


>gi|72390029|ref|XP_845309.1| aspartyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62359273|gb|AAX79715.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70801844|gb|AAZ11750.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
 gi|261328702|emb|CBH11680.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 560

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 117/276 (42%), Gaps = 28/276 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV- 70
           L   D    V +   V   R  G + F  +RD     Q +A        +++ V  E V 
Sbjct: 82  LSKDDADRVVTIRARVDTTRKKGKLAFTVLRDGVHSLQAMA-------AVSEEVPKEMVD 134

Query: 71  ----LCIDGLVMSRSAETINANIITG----QIELSAQKIEILSVA-EELP--LPVFGERE 119
               L  + +V       I A  IT      IEL   +I ++S A   LP  L     RE
Sbjct: 135 FIGQLPCESVVDVEGTVCIAAQPITSTSQQDIELRINRIHVVSEALRVLPFTLADASRRE 194

Query: 120 YPESIRFKY------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             E I+  +      R+LDLR    +     ++R+    R  +I   F+E  +P + A++
Sbjct: 195 DEEGIKINFDTRLACRWLDLRSPASNAIFRIQSRVGQYFRQFLIDSEFVEIHSPKIIATA 254

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +       N+ ++ A  Q+PQ YKQ+ +     R F++ P FR E+  + R   E
Sbjct: 255 SEGGANVFKLGYFNRDAYLA--QSPQLYKQIALQGDLKRVFEVGPVFRAENSNTHRHLTE 312

Query: 234 FYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGN 268
           F  LD+EM   E   ++L+  E +   +FE  S  N
Sbjct: 313 FVGLDVEMRINEHYYEVLDLAEELFCHMFERLSGHN 348



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI+SG  R H + ++LQ   ++ +    V +       +F+ G  PHGG   
Sbjct: 475 FDMFIRGEEISSGAQRIHDASLLLQRAQSLQVDLGPVSDYVD----SFRLGAWPHGGFGV 530

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  NVR  SLFP
Sbjct: 531 GLERVVMLYLGLHNVRLTSLFP 552


>gi|238019653|ref|ZP_04600079.1| hypothetical protein VEIDISOL_01527 [Veillonella dispar ATCC 17748]
 gi|237863694|gb|EEP64984.1| hypothetical protein VEIDISOL_01527 [Veillonella dispar ATCC 17748]
          Length = 507

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 19/246 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +  +R HG   F ++RD  G  QV    D    E  K V+   +L I G +
Sbjct: 57  GQPVVIAGRLMTIRSHGKTAFANVRDKSGDIQVYFRKDVLGEEAYKYVK---MLDI-GDI 112

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---- 133
           +         +  TG++ +   K+ +LS +   PLP          +R++ R++DL    
Sbjct: 113 IGVEGHVFKTH--TGEVTIKVNKLTLLSKSLR-PLPEKWHGLKDTELRYRQRYVDLIVNP 169

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             RDT     VKR++I+  +R  M+ + F+E  TP++ A      AR F+          
Sbjct: 170 EVRDTF----VKRSQIVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALDIDI 225

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y +  AP+ Y + L+  G DR F++  CFR+E   +   P EF  ++   ++ + +D + 
Sbjct: 226 Y-MRIAPELYLKRLIVGGMDRVFEMNRCFRNEGIDNRHNP-EFTTIESYQAYGDVEDAIR 283

Query: 252 TMENVL 257
             EN++
Sbjct: 284 LTENLV 289



 Score = 45.1 bits (105), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G+PP  G+  GIDR+VM L  + ++R+V LFP+
Sbjct: 454 ALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLFPL 490


>gi|302681115|ref|XP_003030239.1| hypothetical protein SCHCODRAFT_69166 [Schizophyllum commune H4-8]
 gi|300103930|gb|EFI95336.1| hypothetical protein SCHCODRAFT_69166 [Schizophyllum commune H4-8]
          Length = 569

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 25/280 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR+SGWVHR+R   GI F+ +RD  G  Q V +   A    A ++  E  + + G + + 
Sbjct: 128 VRVSGWVHRLRDQKGIKFIILRDGTGYLQAVLSGRVAETYDALTLTLESTVELVGTLQAL 187

Query: 81  SAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                      G  ELS    ++L  A   E+       E+  P SI+   R L +R +T
Sbjct: 188 P----EGKTAPGGHELSVDYWKVLGAAPGGEDAFTNRVNEKSDP-SIQADLRHLVIRGET 242

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R+ ++++MR      + +E + P L  +  EG          NQ +F  L Q+
Sbjct: 243 ASTTLRLRSALLSAMREVFARHHMLEVTPPCLVQTQVEGGATLFKLDYYNQPAF--LTQS 300

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  + S  D Y  +   FR E+  + R   E+  L+ E++F+  D+++  +E ++
Sbjct: 301 SQLYLETCLPSLGDVYC-VQESFRAENSNTRRHLSEYTHLEGELAFITFDELMTHLEAII 359

Query: 258 RGVFEEFSNGNTVS--------------NNFLRICYDDAI 283
               +   +  T +                FLR+ Y DAI
Sbjct: 360 CETVDILLDNPTTAALVKQLNPGFKKPERPFLRMPYVDAI 399


>gi|199598398|ref|ZP_03211817.1| Aspartyl/asparaginyl-tRNA synthetase [Lactobacillus rhamnosus
           HN001]
 gi|258508486|ref|YP_003171237.1| asparaginyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|199590717|gb|EDY98804.1| Aspartyl/asparaginyl-tRNA synthetase [Lactobacillus rhamnosus
           HN001]
 gi|257148413|emb|CAR87386.1| Asparaginyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259649796|dbj|BAI41958.1| asparaginyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 432

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 108/252 (42%), Gaps = 32/252 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SACFEIAKSVRSEWVLCI 73
           V   V +  W+   R  G I FL +RD     Q VV+  D     F++AK +R E  + I
Sbjct: 14  VNEEVTIGAWLTDKRSSGKIAFLQLRDGSAYFQGVVSKADVPDEVFQLAKELRQESSMWI 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++   S             E+  + IE++  + + P+     +E+       +R L L
Sbjct: 74  TGVIHQDSRSHFG-------YEIEVRNIELVGDSHDYPI---TPKEHGIEFLLDHRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIA--------ENFIECSTPILTASSPEGARDFLVPSR 185
           R         KR   I  +R  MI         E FI+   PILT S+PEG  +      
Sbjct: 124 RS--------KRQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEGTTELFETDY 175

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ ++  L Q+ Q Y +   A  + + F   P FR E  ++ R   EF+ ++ EM+F  
Sbjct: 176 FDKKAY--LSQSGQLYAEA-GAMAYGKVFTCGPVFRAEKSKTRRHLTEFWMIEPEMAFCH 232

Query: 246 QDDILNTMENVL 257
           Q++ L   E  +
Sbjct: 233 QEESLKVQERYV 244


>gi|296111614|ref|YP_003621996.1| lysine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295833146|gb|ADG41027.1| lysine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 493

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 27/265 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDGLVM 78
           V ++G +   R  G +IF D RD  G  QV A  D     + I K       L I G++M
Sbjct: 62  VIIAGRMVAKRGAGKVIFADFRDVSGKIQVYAKRDDLAENYPIIKRADLGDFLGIKGIMM 121

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
              A         G++ + A ++  L+ A   P+P           R++ R+LDL   + 
Sbjct: 122 KTEA---------GELTILATELTHLTKALR-PMPDKFHGIADVETRYRKRYLDLIANEE 171

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
             K    R++II+++R  M +++F+E  TPIL T +    AR F+          Y +  
Sbjct: 172 SFKKFQLRSKIISAIRAYMDSQDFMEVETPILQTEAGGAAARPFITHHNALNIDMY-MRI 230

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           A + Y + L+  GF+R ++I   FR+E  DP+ +    EF  ++   ++++  D++N  E
Sbjct: 231 ATELYLKRLVVGGFERVYEIGRIFRNEGMDPKHN---PEFTTMETYAAYMDFTDVMNETE 287

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICY 279
            +       F    +V ++ L++ Y
Sbjct: 288 GI-------FKAAASVVSDDLKVTY 305



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 8/52 (15%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GI ++ +E        A + GMPP GG+  GIDR++MLL  +  +R+V LFP
Sbjct: 447 GIDEDFIE--------ALEYGMPPTGGLGIGIDRLIMLLTDSDTIRDVLLFP 490


>gi|302308063|ref|NP_984841.2| AEL020Wp [Ashbya gossypii ATCC 10895]
 gi|299789278|gb|AAS52665.2| AEL020Wp [Ashbya gossypii ATCC 10895]
          Length = 551

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 120/289 (41%), Gaps = 35/289 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG+ V++SGW+HR+R    ++FL +RD  G  Q V + D A      ++  E  + + G 
Sbjct: 125 VGTRVKVSGWIHRLRMGKAVVFLVLRDGTGYLQAVLSKDLARAYQTSTLTLESTVTLYGT 184

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--------SIRFKY 128
           V     +        G +EL     EI+S+A        G+  +          S+    
Sbjct: 185 V----KQLPEGKTAPGGVELDVDYYEIVSLAPS------GDDSFSNRVQEGADPSLLMDM 234

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R L LR ++L   +  R   + ++R     E  +E + P +  +  EG           +
Sbjct: 235 RHLMLRGESLSAVMKVRAAFLRAIRRVYEDEGLLEVTPPCMVQTQVEGGSTLFKLDYYGE 294

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            +F  L Q+ Q Y +  + +  D  F I   FR E   + R   E+  ++ E+ FV+ D 
Sbjct: 295 EAF--LTQSSQLYLETCLPALGD-VFCIQESFRAEKSHTRRHLSEYTHIEAELGFVDFDQ 351

Query: 249 ILNTMENVL----RGVFEEFSNGNTVSN----------NFLRICYDDAI 283
           +L   E V+    R V E+   G  V             F+R+ Y DAI
Sbjct: 352 LLRHTERVITSLVRYVLEDPVAGPLVKQLNPDFVPPQMPFMRLEYKDAI 400


>gi|225581052|gb|ACN94629.1| GA10495 [Drosophila miranda]
          Length = 557

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 123/286 (43%), Gaps = 21/286 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G  + GS V++ GWVHR+R  G  +IF+ +RD  G  Q V N        A ++ +E  +
Sbjct: 129 GTENRGSRVKVYGWVHRLRRQGKALIFITLRDGTGFLQCVLNDQLCQTYDALTLSTESTV 188

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  EL+    E++ +A           E    ++   R +
Sbjct: 189 VLFGTLKL----IPEGKTAPGGHELNVDYWELIGLAPPGGADAILNEEAQPDVQLDNRHI 244

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R+ ++ + R   +A  + E + P L  +  EG          ++ ++
Sbjct: 245 MIRGENTSKVLKMRSVVMQAFRAHYLARGYNEVTPPTLVQTQVEGGSTLFKLQYFSEEAY 304

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  +D+L+
Sbjct: 305 --LTQSSQLYLETCLPALGD-VFTIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFEDLLD 361

Query: 252 TMENVLRGVFEEFSN---GNTV----------SNNFLRICYDDAIR 284
            +E+++  V +       GN V          +  F R+ Y DAI+
Sbjct: 362 RLEDLVCDVVDRVLKSPWGNLVKELNPDFKPPTKPFRRMNYSDAIK 407



 Score = 40.4 bits (93), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 12/90 (13%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGI 539
           L+ N  EI  G +R   SE +L+ +   GI  +      + R  G          PHGG 
Sbjct: 474 LLPNVGEIVGGSMRIFDSEELLKGYQREGIDPKPYYWYTDQRIYGTL--------PHGGY 525

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G++R +  LL   ++REV L+P   + C
Sbjct: 526 GLGLERFLCWLLNRYHIREVCLYPRFLDRC 555


>gi|91079194|ref|XP_968957.1| PREDICTED: similar to Aspartyl-tRNA synthetase CG3821-PA [Tribolium
           castaneum]
 gi|270003601|gb|EFA00049.1| hypothetical protein TcasGA2_TC002857 [Tribolium castaneum]
          Length = 533

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 112/253 (44%), Gaps = 26/253 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SACFEIAKSVR 66
           +L  S  G+ V +   +H VR  G   F+ +R      Q++ N       +  + A ++ 
Sbjct: 81  ELNKSLAGNDVWVRARLHTVRARGKQCFIVLRQREFTVQLLLNVSETVSKSMVKFASNIT 140

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPES-- 123
            E ++ ++  V+     T  A      +EL A +I ++S  A +LPL +  +   PE   
Sbjct: 141 KESIIDVEAKVVQ--VPTPIAACSQQDVELLASQIWVVSASAPQLPLQI-EDASRPEKGD 197

Query: 124 ------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILT 170
                        R   R LDLR  T          +    R  +  + F E  TP I+ 
Sbjct: 198 EAEGLNIRVNQDTRLDNRVLDLRTPTNQAIFRLEAGVCRLFREVLTRKGFTEIHTPKIIP 257

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           A+S  GA  F V     +GS Y L Q+PQ YKQ+ +A+ FD+ F I   FR ED  + R 
Sbjct: 258 AASEGGANVFTV--SYFKGSAY-LAQSPQLYKQMAIAADFDKVFTIGAVFRAEDSNTHRH 314

Query: 231 PGEFYQLDMEMSF 243
             EF  LD+EM+F
Sbjct: 315 LTEFTGLDLEMAF 327



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  +    +      AF+ G PPH G   
Sbjct: 448 YDMFMRGEEILSGAQRIHDPQLLTERAKHHGIDLK----KIASYIDAFKYGCPPHAGGGI 503

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+  +FP
Sbjct: 504 GLERVVMLYLGLDNIRKTCMFP 525


>gi|126180281|ref|YP_001048246.1| lysyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|229559860|sp|A3CY14|SYK_METMJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|125863075|gb|ABN58264.1| lysyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 508

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 132/288 (45%), Gaps = 30/288 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKS-VRSEWVLCIDGL 76
           V  +G V+ VR HG  IF DI D  G  Q+    +      F++ K  V +  ++ + G 
Sbjct: 57  VSTAGRVYVVRQHGKTIFADIGDSEGRIQLYLRKNDLGEEQFDLFKQYVDAGDIVGVVGH 116

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V              G+I +   + E+L+ +   PLP           R++ R+LDL  +
Sbjct: 117 VFRTK---------MGEITVWVDRFELLTKSV-CPLPEKFHGLKNVETRYRQRYLDLIMN 166

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
              +   + R+RII+ +R  +   +++E  TP L        AR F           Y L
Sbjct: 167 EESRETFRARSRIISLLRQFLFERDYLEFETPTLQPIYGGANARPFTTHHNALDQKLY-L 225

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GFD+ F+IA  FR+ED  ++  P EF  +++  ++ + +D++N  E
Sbjct: 226 RIAPELYLKRLVVGGFDKVFEIAKNFRNEDIDTNHNP-EFTMVEVYEAYRDYNDMMNLTE 284

Query: 255 NVLRGVFEEFSNGNTV----------SNNFLRICYDDAIRRY-GTDKP 291
            +L  + E+   G TV          S  + R+  ++A+R Y G D P
Sbjct: 285 EILSHLAEKVL-GTTVCSFAGHDLDFSRPWRRLTMEEAVREYAGIDFP 331



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP GG+  GIDR+VMLL G  +++EV LFP
Sbjct: 452 ALGYGMPPTGGVGIGIDRLVMLLTGKDSIKEVLLFP 487


>gi|195123945|ref|XP_002006462.1| GI18555 [Drosophila mojavensis]
 gi|193911530|gb|EDW10397.1| GI18555 [Drosophila mojavensis]
          Length = 533

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 25/263 (9%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD---SACFEIAKSVRSEWVLCIDG 75
            V + G VH  R  G   FL +R      Q ++A  D       + A ++  E ++ I  
Sbjct: 90  LVWVRGRVHTTRAKGKQCFLILRQQSSTVQCILAVGDIISKQMVKFAGNIPKESIIDIQA 149

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES----------- 123
             ++    T   +     +ELS ++I ++S A+ +LPL +  +   PE+           
Sbjct: 150 KAVA--VPTKIESCTEQSLELSVEQIFVISQAKAQLPLQI-EDASRPENADDAEGLNIRV 206

Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   R LDLR             +    R  +  + F E  TP + +++ EG  + 
Sbjct: 207 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPKIISAASEGGANV 266

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S     ++  L Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF  LD+E
Sbjct: 267 FTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLE 324

Query: 241 MSF-VEQDDILNTMENVLRGVFE 262
           M+F     ++L+T+ N    +F+
Sbjct: 325 MAFKYHYHEVLHTIGNTFTAIFK 347



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++   + GI       +      +F+ G PPH G   
Sbjct: 448 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDI----TKIAAYIESFRYGCPPHAGGGI 503

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 504 GMERVVMLYLGLDNIRKTSMFP 525


>gi|62822481|gb|AAY15029.1| unknown [Homo sapiens]
          Length = 313

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 30/204 (14%)

Query: 148 IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I +  R  +I + F+E  TP + +++ EG  +    S     ++ A  Q+PQ YKQ+ + 
Sbjct: 14  ICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCIC 71

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFE 262
           + F++ F I P FR ED  + R   EF  LD+EM+F        ++I +TM  + +G+ E
Sbjct: 72  ADFEKVFSIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQE 131

Query: 263 EFSNG-NTVSNNF-----------LRICYDDA---IRRYGT---DKPDLRNP---IIMHN 301
            F     TV+  F           LR+ Y +A   +R  G    D+ DL  P   ++ H 
Sbjct: 132 RFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHL 191

Query: 302 VTEHFVHSEFRVFSKI-LSVNPGY 324
           V E +  ++F +  K  L+V P Y
Sbjct: 192 VKEKY-DTDFYILDKYPLAVRPFY 214



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 228 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 283

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 284 GLERVTMLFLGLHNVRQTSMFP 305


>gi|158294413|ref|XP_315584.3| AGAP005576-PA [Anopheles gambiae str. PEST]
 gi|157015553|gb|EAA11760.4| AGAP005576-PA [Anopheles gambiae str. PEST]
          Length = 543

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 119/285 (41%), Gaps = 39/285 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           DL      + V + G VH  R  G   FL +R      Q        C        S+ +
Sbjct: 91  DLSHCQKDALVWVRGRVHTSRCKGKQCFLVLRQQSSTVQ--------CLLAVNEQVSKQM 142

Query: 71  LCIDGLVMSRSAETINANII---------TGQ-IELSAQKIEILSVAE-ELPLPVFG--- 116
           +   G +   S   + A ++         T Q +EL   ++ +LS A+ +LPL +     
Sbjct: 143 VKFSGSIPRESIIDLKAKVVPVEQRIESCTEQTLELHVLELFLLSAAKAQLPLQIEDASR 202

Query: 117 --EREYPESIRFKY--------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
             + + PE+++ +         R LDLR             +    R  + A+ F E  T
Sbjct: 203 PEKSDDPEALKIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDVLTAKGFTEIHT 262

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P + +++ EG  +    S     ++  L Q+PQ YKQ+ +A+ FD+ F +   FR ED  
Sbjct: 263 PKIISAASEGGANVFTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSN 320

Query: 227 SDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSN 266
           + R   EF  LD+EM+F        D I NT   + +G+ + ++ 
Sbjct: 321 THRHLTEFVGLDLEMAFKYHYHEVLDTIGNTFTEMFKGLRDHYAK 365



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++     GI      ++      AF+ G PPH G   
Sbjct: 458 YDMFMRGEEILSGAQRIHDPEYLIERAKLHGIDL----SKIAAYIDAFRYGCPPHAGGGI 513

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 514 GMERVVMLYLGLDNIRKTSMFP 535


>gi|284033104|ref|YP_003383035.1| tRNA synthetase class II (D K and N) [Kribbella flavida DSM 17836]
 gi|283812397|gb|ADB34236.1| tRNA synthetase class II (D K and N) [Kribbella flavida DSM 17836]
          Length = 429

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 119/296 (40%), Gaps = 31/296 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           S VG  V ++GWVHR R    + FL +RD  G++Q+V        ++   +  E V+ + 
Sbjct: 10  SAVGQTVTVAGWVHRRRRLAAVSFLVLRDRSGLSQIVVKAPETQAQL-DGLGEETVVQVT 68

Query: 75  GLVMSR-----SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           G V +       AE ++  I+          IE+        LPV               
Sbjct: 69  GTVAANPQAPGGAELVDPVIVPLTEPAKTPPIELWRPTVGAGLPVV----------LDNA 118

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            + LR   +          ++  R  +   +F E  TP +  ++ E   +          
Sbjct: 119 PVALRHPAVRAGWEVAAAALHGFRSTLDGLDFTEIQTPKIVGTATESGANVFALDYFGGP 178

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDD 248
           ++ A  Q+PQ YKQ  M   F+R +++ P FR E   + R   E+  LD E  F+ +  D
Sbjct: 179 AYLA--QSPQFYKQ-TMVGVFERVYEVGPVFRAEPHDTVRHLAEYVSLDAEFGFIGDHRD 235

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +L  +  VL G+        TV +         A+ R G + P++   + + + TE
Sbjct: 236 VLAVLREVLAGML------ATVGSR-----AGTALERLGVELPEMPGEVPVLHFTE 280



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G E+ +GG R H       A +  G S +     +    +AFQ GMPPHGG A 
Sbjct: 342 FDLLFRGVELVTGGQRLHRYSDYAAALAARGESADA--PAYSSYLQAFQHGMPPHGGFAI 399

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R V  L GA+NVREV+LFP
Sbjct: 400 GLERFVARLTGAENVREVTLFP 421


>gi|18312919|ref|NP_559586.1| lysyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|18160412|gb|AAL63768.1| lysyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 482

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 125/287 (43%), Gaps = 26/287 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  ++ +G V  +R H  ++F+D+ +     QV+A+P     E     R +++     L
Sbjct: 54  LGMTIKTAGRVSDIRRHPNVVFIDLYEDGARFQVMADPKLPLLE--HIWRGDFIGVEGPL 111

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V ++           G   + A  I +L+ A + PLP +G+ +       +YR + +  D
Sbjct: 112 VKTQR----------GDYAVRAASIVLLAKAVQ-PLPEWGKVDRDSPFYMRYRSVAMVLD 160

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
             L   I  R ++I + R  M    F+E  TP+L        AR F          +Y L
Sbjct: 161 LQLRWRIAARAKLIQAFREAMWKRGFLEIPTPVLQPIYGGAAARPFTTKIWAIDEEWY-L 219

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ Y +  + +GF + F+I P FR+ED  +   P EF+ L+   ++ +  DI+   E
Sbjct: 220 RISPELYLKRYIIAGFPKVFEIGPQFRNEDIDALHNP-EFWSLEAYQAYADYKDIMRLTE 278

Query: 255 NVL---------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
            V+          GV +        +  + RI   DA+R +    PD
Sbjct: 279 EVVYEAVSSVLGTGVVKYRDWNINFNPPWRRITLHDALREFAGVDPD 325



 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 26/36 (72%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           GMPP GG+  G+DR+ M++  A+++++V  +P+ + 
Sbjct: 446 GMPPTGGVGIGVDRLAMIITNAESIKDVIPYPIVKR 481


>gi|332982217|ref|YP_004463658.1| lysyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699895|gb|AEE96836.1| lysyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 497

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 17/251 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCID 74
           G  V ++G +   R HG   F DI D  G  Q+    D   S  +E+ + +    +L + 
Sbjct: 57  GCEVSIAGRIMAKRGHGKASFCDIMDELGEIQLYVKMDEVGSEAYELFRDLDIGDILGVI 116

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G+V             +G+I +  +  E+L+ +   PLP          +R++ R+LDL 
Sbjct: 117 GIVFKTH---------SGEISVKVKTFELLAKSLR-PLPEKWHGLQDPDLRYRRRYLDLI 166

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
             D + +  V R+RII +MR  + A  ++E  TP+L T +    AR F+          Y
Sbjct: 167 MNDKVKETFVTRSRIIKTMRNFLDARGYLEVETPVLQTTAGGATARPFITHHNALDIDMY 226

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + + + L+  GF+R ++I   FR+E       P EF  +++  ++ +  D+++ 
Sbjct: 227 -LRIATELHLKRLIIGGFERVYEIGRIFRNEGMDIKHNP-EFTTIELYEAYCDYHDMMDL 284

Query: 253 MENVLRGVFEE 263
            E ++  + +E
Sbjct: 285 TEQLITYIAQE 295



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 454 AMEYGMPPTGGLGIGVDRLVMLLTDSYSIRDVILFP 489


>gi|327311312|ref|YP_004338209.1| lysyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947791|gb|AEA12897.1| lysyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 481

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 123/287 (42%), Gaps = 26/287 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VGS V  +G    +R H  ++F+D+ +     Q++ +P     E     R ++V     L
Sbjct: 49  VGSTVTTAGRATDIRRHPNVVFIDLYEDGARFQIMVDPKEPLLEYI--WRGDYVGASGAL 106

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V ++           G   + A+++ +L+ A +  LP +G+ +       ++R + +  D
Sbjct: 107 VKTQR----------GDYAVKAERLFLLAKAVQ-SLPEWGKVDRGSPFYMRHRAVSMVLD 155

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
             L   I  R R+I + R       F+E  TP+L        AR F          +Y L
Sbjct: 156 IQLRWRIYTRARLIQAFREAFWRRGFVEIPTPVLQPIYGGAAARPFTTHIWAIDEDWY-L 214

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ Y +  + +GF R F+I P FR+ED  +   P EF+ L+   ++ + +D++  ME
Sbjct: 215 RISPELYLKRYIIAGFSRVFEIGPQFRNEDIDALHNP-EFWSLEAYQAYADYNDMMRLME 273

Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
                  +       V         S  + RI   DA+R +G   PD
Sbjct: 274 ETTYEALQAALGTAVVKYGESTINFSPPWRRITLYDALREFGGVDPD 320



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/33 (51%), Positives = 25/33 (75%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP GGI  GIDR+ M+  GA+++++V  FP+
Sbjct: 441 GMPPTGGIGIGIDRLAMIATGAESIKDVIPFPI 473


>gi|115396750|ref|XP_001214014.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114193583|gb|EAU35283.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 909

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 18/258 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VG+ +  +  +H VR     ++FL  R      Q V + +     IA    +E  L I  
Sbjct: 147 VGTEIFFTARLHVVRRMSAKLVFLVFRQQLVTFQGVLHEEPGVKSIAMVQWAEH-LRIGS 205

Query: 76  LVMSRSAETINANIITGQIE---LSAQKIEILSVAEELPLPVFGEREY-PESIRFKYRFL 131
           ++  R   TI A  ++ + E    S  + EI S  EE    V G R + P+ +R   R L
Sbjct: 206 ILQVRG--TIRAPQLSTREEPVPFSVYEAEIRSPEEER---VEGRRSHIPDRVRLANRLL 260

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           DLR  T       ++ + N  R  +  + FIE  TP L  S+ E        +   + +F
Sbjct: 261 DLRTPTSQSIFRIQSAVGNLFRTALDEQGFIEIHTPKLQGSATESGASVFSVNYFGRDAF 320

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS----FVEQD 247
            A  Q+PQ  KQ+ +A+ F R ++I   FR E+  + R   E+  LD+EM+    + E  
Sbjct: 321 LA--QSPQLAKQMAIAADFGRVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEML 378

Query: 248 DILNT-MENVLRGVFEEF 264
           D+L+  ++N+L+GV+  +
Sbjct: 379 DVLDAVIKNILQGVYGRY 396



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H   ++ +     GI+ + +E    G    F+ G PPH G   
Sbjct: 497 FDIFIRGQEIVSGGQRIHDPRMLEENMRRNGINPDSMEEYMEG----FEWGAPPHAGAGV 552

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R+VMLLL   N+R  SLF
Sbjct: 553 GLERLVMLLLKLGNIRLASLF 573


>gi|320583691|gb|EFW97904.1| Cytosolic asparaginyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 549

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 11/240 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V++ GW+HR+R   G+ F+ +RD  G  Q V + D A      S+  E  L I G +   
Sbjct: 127 VKVQGWIHRLRLQKGLAFIVLRDGTGYVQCVLSGDLANAYQTLSLTIESTLSIYGTIRKL 186

Query: 81  SAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                      G +EL+    E++ +A   +E       E   P SI    R L LR +T
Sbjct: 187 P----EGKSAPGGVELAVDYYEVVGLAPSGKESFTNKIQEGTDP-SILMDQRHLTLRGET 241

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           L   +  R  ++ ++R   I E+  E + P +  +  EG           + +F  L Q+
Sbjct: 242 LSAVMKVRAALLAAIRRVYIEESVTEVTPPCMVQTQVEGGSTLFKMDYYGEEAF--LTQS 299

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  + +  D Y  I   FR E   + R   E+  ++ E++FV  DD+L+ +E V+
Sbjct: 300 SQLYLETCLPALGDVYC-IQESFRAEKSHTRRHLSEYTHIEAELAFVTFDDLLSHIERVI 358


>gi|308809533|ref|XP_003082076.1| OJ1717_A09.34 gene product (ISS) [Ostreococcus tauri]
 gi|116060543|emb|CAL55879.1| OJ1717_A09.34 gene product (ISS) [Ostreococcus tauri]
          Length = 542

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 120/278 (43%), Gaps = 31/278 (11%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK------- 63
           DL  +     V + G VH VR  G   F+ +R      QVV   D     ++K       
Sbjct: 84  DLSGTLADEEVLVRGRVHNVRGKGKSAFIVLRQQTATVQVVLFVDDV--HVSKGMVKWVC 141

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREY 120
           S+  E V+ + G+++   +  + +      +E+S ++I  +S +   E+LP  +  +   
Sbjct: 142 SLPRETVVDVRGVIVRPESGEVES-CTQKDVEISLREIHCISRSVPTEDLPF-LIEDASR 199

Query: 121 PES---------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
           PE+                R   R LDLR    +     ++ +    R  ++  NF E  
Sbjct: 200 PETAFENEKAQYVRVGQDTRLDNRVLDLRTPANNAIFKIQSGVGTLFREALLRRNFTEIH 259

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP L A + EG         +  G    L Q+PQ YKQ+ +    +  F+I P FR ED 
Sbjct: 260 TPKLIAGASEGGAAVFRLDYMKLGP-ACLAQSPQLYKQMAIMGDLEGVFEIGPVFRAEDS 318

Query: 226 RSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
            + R   EF  LDMEMS  E  D++L+ ++ +   +F+
Sbjct: 319 NTHRHLCEFTGLDMEMSIKEHYDEVLDVLDELFVSMFD 356



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H  +++ +     GI    +++       +F+ G  PHGG   
Sbjct: 457 FDIFIRGQEIISGAQRIHDPKLLAERALACGIELPTIQSYID----SFKYGATPHGGCGV 512

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML L   N+R+ S+FP
Sbjct: 513 GLERVAMLFLDLNNIRKTSMFP 534


>gi|253579111|ref|ZP_04856382.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850054|gb|EES78013.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 448

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EI +GG R H   +++Q   + G+++E +E         F+ GMPPHGG
Sbjct: 360 TLSFDLLFKGLEITTGGQRIHDYNMLVQKIEDRGMTQEGMEQYLD----TFKHGMPPHGG 415

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +  G++R+ M L+G +NVRE  LFP   N
Sbjct: 416 LGIGLERLTMQLIGEENVRETCLFPRDMN 444



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 26/293 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           + G VH +R  G + F+ +R   G+ Q V   + A   I + ++    + + G++     
Sbjct: 35  IEGAVHSIRNMGDVAFIILRRREGLFQTVYENEMANVSIHE-LKEAMTIRVKGILHEEER 93

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGER---EYPESIRFKYRFLDLRRDTLH 139
                       EL  + I+ILS   E PLP+  ++         +  YR + LR     
Sbjct: 94  APHGR-------ELRIRHIDILSTPAE-PLPMAIDKWKLNTSLEAKLNYRPISLRNIQER 145

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
                +  +  + R  +  + F E  TP + A   EG  +    S  ++ +   L Q+PQ
Sbjct: 146 SKFKIQEALTKAFRDYLYGQGFTEIHTPKIGARGAEGGANLFKFSYFHKPA--VLAQSPQ 203

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            YKQ+ M   FDR F+  P FR E   + R   E+  LD EM +++  + +  ME    G
Sbjct: 204 FYKQM-MVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGYIDSFEEIMAMET---G 259

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN-PIIMHNVTEHFVHSEF 311
             +        + N L+  Y   ++    D PD+   P +  +V +  V  ++
Sbjct: 260 FLQ-------YAMNLLKTEYAKEVQILKLDIPDVSKIPAVRFDVAKELVSQKY 305


>gi|227528916|ref|ZP_03958965.1| lysine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227351190|gb|EEJ41481.1| lysine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 507

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 128/288 (44%), Gaps = 32/288 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWV 70
           +S+ G  V ++G + R R  G   F D  D  G  QV A  D      + I K       
Sbjct: 51  LSEKGQMVIIAGRMTRKRSSGKAGFADFVDRTGKIQVYARKDMVGDEPYHIFKRADIGDF 110

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYR 129
           L I+G V+            TG++ + A KI  LS A   PLP   E    PE+I ++ R
Sbjct: 111 LGIEGDVIKTD---------TGELTVRAHKITFLSKALR-PLPNKWEGVTDPETI-YRQR 159

Query: 130 FLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187
           +LDL  +    K   +RT II ++R  M    F E  TPIL T +    AR F+      
Sbjct: 160 YLDLISNPESFKRFHQRTAIIKAVRRYMDEHGFTEVETPILNTQAGGANARPFITHHNAL 219

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVE 245
               Y L  A + Y + L+  GF+R +++   FR+E  DP  +    EF  ++   ++ +
Sbjct: 220 DIDMY-LRIATELYLKRLIVGGFERVYELGRIFRNEGMDPHHN---PEFTTMETYAAYFD 275

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIR 284
             D+++  E +++   +  S+   V+          +F RI   DA++
Sbjct: 276 FRDVMDETEGIVKAAAKVVSDDGKVTYQGHEIDLGGDFKRITMVDAVK 323



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  AK++R+V LFP
Sbjct: 453 ALEYGMPPTGGLGIGIDRLVMLLTDAKSIRDVILFP 488


>gi|212696519|ref|ZP_03304647.1| hypothetical protein ANHYDRO_01057 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676455|gb|EEB36062.1| hypothetical protein ANHYDRO_01057 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 639

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 35/287 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75
           G  VR++G +   R HG + F+D++D  G  QVV   N     F+  K      ++ I+G
Sbjct: 55  GKVVRVAGRIMARRGHGNMSFMDVQDSLGQIQVVNRKNVMGDNFKETKGYDIGDLIGIEG 114

Query: 76  LVMSR-----SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            V        S ET +A+++T  +++             LP    G ++ P+ IR++ R+
Sbjct: 115 KVFKTNQGEVSIETEHADLLTKSLQI-------------LPEKWHGLKD-PD-IRYRQRY 159

Query: 131 LDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQ 188
           +DL  +   KN+ V R++II+ +R  +    F+E  TPIL T +    AR F+       
Sbjct: 160 VDLIVNPEVKNVFVLRSKIISEIRRFLENRGFLEVETPILNTIAGGATARPFITHHNSLD 219

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  A + Y + L+  GFD+ ++I   FR+E   +   P EF  +++  ++ + +D
Sbjct: 220 IGMY-LRIASELYLKRLIVGGFDKVYEIGRMFRNEGMDATHNP-EFTTMELYQAYGDFED 277

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           ++   E ++  V  +      V  +         + R+   DA++ Y
Sbjct: 278 MMEITETMVEDVANKVKGSTVVEFDGNEIELKAPWRRVSMIDAVKEY 324



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M+L G  ++R+V LFP
Sbjct: 449 ALEVGMPPTGGLGIGIDRLIMILTGQHSIRDVLLFP 484


>gi|10835611|pdb|1EOV|A Chain A, Free Aspartyl-Trna Synthetase (Asprs) (E.C. 6.1.1.12) From
           Yeast
          Length = 487

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 112/275 (40%), Gaps = 31/275 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPDSAC----FEIAKSVR 66
             D    V     VH  R  G  + FL +R    + Q  V AN +        + A S+ 
Sbjct: 32  AKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLN 91

Query: 67  SEWVLCIDGLVMS-----RSAETINANIITGQIELSAQKIEILSV-----------AEEL 110
            E ++ + G+V       +SA   N  I   +I   ++  E L +           AE  
Sbjct: 92  LESIVLVRGIVKKVDEPIKSATVQNLEIHITKIYTISETPEALPILLEDASRSEAEAEAA 151

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
            LPV          R  YR +DLR  T       +  +    R  +  + F E  TP L 
Sbjct: 152 GLPVVNL-----DTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLL 206

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +  EG       +     ++ A  Q+PQ  KQ L+ + F+R ++I P FR E+  + R 
Sbjct: 207 GAPSEGGSSVFEVTYFKGKAYLA--QSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRH 264

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF 264
             EF  LDMEM+F E   ++L+T+  +   +F E 
Sbjct: 265 MTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSEL 299



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H   ++ +     G+S E  +         F  G PPH G   
Sbjct: 400 YDFFMRGEEILSGAQRIHDHALLQERMKAHGLSPE--DPGLKDYCDGFSYGCPPHAGGGI 457

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM  L  KN+R  SLFP
Sbjct: 458 GLERVVMFYLDLKNIRRASLFP 479


>gi|255527651|ref|ZP_05394511.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296186916|ref|ZP_06855317.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255508664|gb|EET85044.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048630|gb|EFG88063.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 502

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 126/280 (45%), Gaps = 20/280 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R HG   F D+ D YG  Q+    +    E  K  +S  +    G +
Sbjct: 60  GKSVTVAGRLMSKRVHGKAGFSDLHDRYGKIQLYIKINDVGEERLKEYKSFDI----GDI 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRD 136
           +S +         TG++ L   + E+L+ +   PLP          +R++ R++DL    
Sbjct: 116 LSITGNVFKTK--TGEVTLHITEFELLAKSLR-PLPEKWHGLKDPDLRYRQRYVDLIVNQ 172

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
            +    +KRT+II ++R  +  + ++E  TPIL T +    A+ F+          Y L 
Sbjct: 173 DVKDTFIKRTKIIKAIRTFLDDKEYLEVETPILSTIAGGAAAKPFITHHNALSLDMY-LR 231

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + Y + L+  GF+R ++I   FR+E       P EF  +++  +F + +D++   EN
Sbjct: 232 IATELYLKRLIVGGFERVYEIGRNFRNEGMDVRHNP-EFTCMELYQAFADYNDMMELTEN 290

Query: 256 VLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           ++  V E+      V+           + RI   DA++ Y
Sbjct: 291 MVAFVCEKVLGTTKVTYEDTEIDFTPPWRRITMVDAVKEY 330



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M L    ++R+V LFP
Sbjct: 460 ALEIGMPPTGGLGIGIDRLIMFLTNTSSIRDVILFP 495


>gi|307192131|gb|EFN75459.1| Aspartyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 527

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 104/242 (42%), Gaps = 21/242 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWVLCIDGL 76
           V L G +H  R  G   F+ +R      Q +A+  S       +   ++  E ++ ++G+
Sbjct: 89  VWLRGRLHTSRAKGKRCFIVLRQQSYTVQGLASEGSTISKQMIKFISNITKESIIDVEGM 148

Query: 77  VMSRSAETINANIITGQIEL------SAQKIEILSVAEELPLPVFGEREYPESI------ 124
           V S   +  + +    +IEL      SA K ++    E+   P+    E  ES       
Sbjct: 149 VKSSPIKIESCSQKDVEIELKCVFVISAAKPQLPLQIEDAARPINEMDEMDESTLNIRVN 208

Query: 125 ---RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              R   R LDLR             I    R  +  + F+E  TP + +++ EG  +  
Sbjct: 209 QDTRLDNRVLDLRTPANQAIFRVEAGICKLFRDILTKKGFVEIHTPKIISAASEGGANVF 268

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
             S     ++ A  Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R   EF  LD+EM
Sbjct: 269 TVSYFKSNAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVGLDLEM 326

Query: 242 SF 243
           +F
Sbjct: 327 AF 328



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E + +   + GI  E +++       AF+ G PPH G   
Sbjct: 442 YDMFMRGEEIISGAQRIHDPEFLTERAKHHGIDIEKIKSYID----AFRYGCPPHAGGGI 497

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+VS+FP
Sbjct: 498 GLERVVMLYLGLDNIRKVSMFP 519


>gi|255018989|ref|ZP_05291115.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 81

 Score = 73.9 bits (180), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 2/78 (2%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
          RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4  RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEALEIA 63

Query: 63 KSVRSEWVLCIDGLVMSR 80
           SVR+E+V+ I G V +R
Sbjct: 64 DSVRNEFVVTIKGTVHAR 81


>gi|1064982|pdb|1ASY|A Chain A, Class Ii Aminoacyl Transfer Rna Synthetases: Crystal
           Structure Of Yeast Aspartyl-Trna Synthetase Complexed
           With Trna Asp
 gi|1064984|pdb|1ASY|B Chain B, Class Ii Aminoacyl Transfer Rna Synthetases: Crystal
           Structure Of Yeast Aspartyl-Trna Synthetase Complexed
           With Trna Asp
 gi|1064986|pdb|1ASZ|A Chain A, The Active Site Of Yeast Aspartyl-Trna Synthetase:
           Structural And Functional Aspects Of The Aminoacylation
           Reaction
 gi|1064988|pdb|1ASZ|B Chain B, The Active Site Of Yeast Aspartyl-Trna Synthetase:
           Structural And Functional Aspects Of The Aminoacylation
           Reaction
          Length = 490

 Score = 73.9 bits (180), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 112/275 (40%), Gaps = 31/275 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPDSAC----FEIAKSVR 66
             D    V     VH  R  G  + FL +R    + Q  V AN +        + A S+ 
Sbjct: 35  AKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLN 94

Query: 67  SEWVLCIDGLVMS-----RSAETINANIITGQIELSAQKIEILSV-----------AEEL 110
            E ++ + G+V       +SA   N  I   +I   ++  E L +           AE  
Sbjct: 95  LESIVLVRGIVKKVDEPIKSATVQNLEIHITKIYTISETPEALPILLEDASRSEAEAEAA 154

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
            LPV          R  YR +DLR  T       +  +    R  +  + F E  TP L 
Sbjct: 155 GLPVVNL-----DTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLL 209

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +  EG       +     ++ A  Q+PQ  KQ L+ + F+R ++I P FR E+  + R 
Sbjct: 210 GAPSEGGSSVFEVTYFKGKAYLA--QSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRH 267

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF 264
             EF  LDMEM+F E   ++L+T+  +   +F E 
Sbjct: 268 MTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSEL 302



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H   ++ +     G+S E  +         F  G PPH G   
Sbjct: 403 YDFFMRGEEILSGAQRIHDHALLQERMKAHGLSPE--DPGLKDYCDGFSYGCPPHAGGGI 460

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM  L  KN+R  SLFP
Sbjct: 461 GLERVVMFYLDLKNIRRASLFP 482


>gi|171186197|ref|YP_001795116.1| asparaginyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170935409|gb|ACB40670.1| asparaginyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 431

 Score = 73.9 bits (180), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 113/282 (40%), Gaps = 34/282 (12%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           +  + GWV+R R     +F+ +RD  G+ Q+V   D   F+IA+ +  E  L   G +  
Sbjct: 20  YATVRGWVYRKRSLKEKVFVVLRDATGVIQLVFQRDK--FKIAEDLNIESALVATGRL-- 75

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPL---PVFGEREYPESIRFKYRFLDLRRD 136
                +      G +EL  +K+E     E  P+       + EY   +R     L LR  
Sbjct: 76  -----VREPRAPGGVELHVEKVEWAYAGEPYPINEDAAAADSEYLLDVRH----LWLRSR 126

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +   +  R  +  ++        F E  TP+   ++ EG           Q  +  L Q
Sbjct: 127 KMQAVLKIRHTVFEAIHQYFRRSGFYEVQTPMFITAAVEGGATLFKVDYFGQPVY--LTQ 184

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y + L+ S  ++ + IAP FR E  R+ R   EF+  +MEM++   +D     E V
Sbjct: 185 SSQFYLEALIYS-LEKVYVIAPSFRAEPSRTRRHLTEFWHAEMEMAWAGMEDAAKVGEEV 243

Query: 257 LRGVFEEFSNGNT---------------VSNNFLRICYDDAI 283
           +  V E+                         F R+ YD+A+
Sbjct: 244 ISYVVEKVLQERAEELSLLGRKTEPLERAKPPFYRVSYDEAV 285



 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 15/86 (17%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPHG 537
           L+  G+ E+  GG R +    +++     G++ E  +      R+G +         PH 
Sbjct: 347 LLPEGYGEVIGGGERIYDPVELVEKIKRFGLNPEDYQWYIDLRRYGSV---------PHA 397

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G+DR+VM + GA ++R+V  FP
Sbjct: 398 GFGLGVDRLVMWITGADHIRDVVPFP 423


>gi|302036123|ref|YP_003796445.1| asparaginyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300604187|emb|CBK40519.1| Asparaginyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 430

 Score = 73.9 bits (180), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 118/291 (40%), Gaps = 31/291 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRS 67
           D   +  G  V + GW+   R  G + FL +RD  G  Q V   A    A F  +  +  
Sbjct: 7   DEAAAHAGQEVTIRGWLRSRRDKGKLHFLIVRDGTGDIQAVVSKATVGDAQFARSAELTQ 66

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           E  L + G +   +          G  EL   ++++L VAE  P+     +E+      +
Sbjct: 67  ESSLVLTGTLRQDAR-------APGGYELDVLRLDVLQVAESFPI---QPKEHGTGFLME 116

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +R L LR    H  +  R  II + R       F     PI T ++ EG          +
Sbjct: 117 HRHLWLRSSRQHAVLRIRHEIIRACRNFFDDRGFTLVDAPIFTPNACEGTTTLFQTQYFD 176

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + ++  L Q+ Q Y +   A+ F + +   P FR E  ++ R   EF+ ++ E++F +  
Sbjct: 177 ETAY--LTQSGQLYSEA-TAAAFGKVYCFGPTFRAEKSKTRRHLMEFWMVEPEVAFAQLP 233

Query: 248 DILNTMENVLRGVF---------------EEFSNGNTVSNNFLRICYDDAI 283
           D+++  E  L  +                 + +    V+  F RI Y++AI
Sbjct: 234 DMMDLAEQFLAHIVAAVLKSRRAELLLLERDPAKLERVTAPFPRITYEEAI 284


>gi|154280104|ref|XP_001540865.1| hypothetical protein HCAG_04705 [Ajellomyces capsulatus NAm1]
 gi|150412808|gb|EDN08195.1| hypothetical protein HCAG_04705 [Ajellomyces capsulatus NAm1]
          Length = 973

 Score = 73.9 bits (180), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 119/270 (44%), Gaps = 30/270 (11%)

Query: 17  VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--LCI 73
           +G  V     VH +R     ++F+  R      Q V            ++  +WV  + +
Sbjct: 161 IGQEVTFRARVHHIRNMSSKLVFVIFRQQVTTMQGVLAEKPGMI---STLMVQWVERIRV 217

Query: 74  DGLVMSRSAETINANIITG----QIELSAQKIEILSVAEELPLP---------------V 114
             +V  R   + +   +TG     +EL  Q++ ++ V  E P+P                
Sbjct: 218 GSIVKVRGVLSSSKVPVTGCTIHDVELDIQELHVV-VHREDPIPFSVYEAELLNKDAKNT 276

Query: 115 FGEREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            G R +  +  R   R LDLR DT       ++ I N  R  + ++ FIE  TP L +S+
Sbjct: 277 DGRRNHVLDRTRLSNRILDLRTDTSQSIFRIQSAISNLFRASLDSQGFIEIHTPKLQSSA 336

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            E            + +F A  Q+PQ  KQ+ +A+ F+R ++I   FR E+  + R   E
Sbjct: 337 TESGASVFEVKYFTREAFLA--QSPQLAKQMAIAADFERVYEIGAVFRAENSNTHRHLTE 394

Query: 234 FYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
           +  LD+EM+  E   + L T+++VL+ +F+
Sbjct: 395 YTGLDIEMAIEEHYHEALETIDSVLKEIFK 424



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H  +++ Q     GI+   +E    G    F+ G PPH G   
Sbjct: 532 FDIFVRGQEIVSGGQRIHDEKILEQRMKEAGINPLAMEEYLEG----FRWGAPPHAGAGI 587

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R++ML+L   N+R  SLF
Sbjct: 588 GLERLLMLILKLGNIRLASLF 608


>gi|145523029|ref|XP_001447353.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414864|emb|CAK79956.1| unnamed protein product [Paramecium tetraurelia]
          Length = 564

 Score = 73.9 bits (180), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 116/294 (39%), Gaps = 55/294 (18%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEIAK 63
             GD+  + V   + +   +H  R  G + FL +R++Y   QVVA       +   +   
Sbjct: 83  KVGDIDQTLVNQVILVRARIHNSRVKGKLAFLVLRENYNTIQVVAEKGEFASAQMLKYMS 142

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +  E V+ I+ LV   + E ++    T ++EL  + I++  V   LP+  F   +    
Sbjct: 143 GIPLESVVDIEALVKQPNKEILSC---TQKVELEVRSIKV--VTRSLPMLPFQIEDASRR 197

Query: 124 I-------------------------------------------RFKYRFLDLRRDTLHK 140
           I                                           R   R +DLR      
Sbjct: 198 ITDFEDGVQEQKQEEPQQKQEEVQQKQEKQDKTEKQQIQVMLKTRLDNRVIDLRTPAKQA 257

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
               ++ I    R  ++   FIE  TP L   + EG  +       NQ +   L Q+PQ 
Sbjct: 258 IFRVQSGIGLLFREFLVENGFIEIHTPKLIGGTSEGGTNVFKLKYFNQDA--CLAQSPQL 315

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTM 253
           YKQ+ + + +DR F++AP FR E+  + R   EF  +D+EM   E   ++L+ M
Sbjct: 316 YKQMCLMADYDRVFEVAPVFRAENSNTHRHQCEFISMDIEMVIKEHFTELLDLM 369



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD    G EI SG  R H  E++++     GI+ E +++       +F+ G  PHGG
Sbjct: 476 TLSYDFFMRGEEIVSGAQRVHDPELLIKQIKEKGIAVEPLKDYID----SFRYGAYPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
            A G++R+  L    KN+R   +FP
Sbjct: 532 CAFGLERVAFLYFNLKNIRNACMFP 556


>gi|152979179|ref|YP_001344808.1| lysyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|229559853|sp|A6VPH6|SYK_ACTSZ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|150840902|gb|ABR74873.1| lysyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 503

 Score = 73.9 bits (180), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 21/282 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G +   R  G   F+ I+D  G  Q+      AC  + + V +E V   D G ++ 
Sbjct: 64  VAVAGRIMTRRAMGKATFITIQDMSGKIQLYV----ACDNLPEGVYAEDVKSWDLGDIVG 119

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138
                      T ++ + A ++++L+ A   PLP        +  R++ R+LDL   +  
Sbjct: 120 IKGTLFKTK--TNELTVKAHEVQLLTKALR-PLPDKFHGLSDQETRYRQRYLDLISNEES 176

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            +  V R+++I  +R   I + FIE  TP+L        AR F+          Y L  A
Sbjct: 177 RRTFVIRSKVIAGIREYFIGKGFIEVETPMLQVIPGGAAARPFVTHHNALDIDMY-LRIA 235

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E       P EF  ++   ++ +  D+++  E +L
Sbjct: 236 PELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELL 294

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDK 290
           R +  +      V            F RI   DA+ +YG +K
Sbjct: 295 RKLALDILGTTIVPYGEYEFDFGKPFERITMHDAVLKYGAEK 336



 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536
           +++L   G EI +G    + +E   + F     +K+  ++    +      A + G+PP 
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQAERFDAQVAAKDAGDDEAMFKDDDFVTALEHGLPPT 470

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+ ML   A ++R+V LFP
Sbjct: 471 AGEGLGIDRLAMLFANAPSIRDVILFP 497


>gi|259501967|ref|ZP_05744869.1| lysine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259170144|gb|EEW54639.1| lysine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 500

 Score = 73.9 bits (180), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 32/288 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWV 70
           +++ G  V ++G + R R  G   F D  D  G  QV A  D      + I K       
Sbjct: 44  LNEKGEMVTIAGRMTRKRSSGKAGFADFVDRTGKIQVYARKDMVGDEQYHIFKRADIGDF 103

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYR 129
           L I+G V+  +         TG++ + A KI  LS A   PLP   E    PE+I ++ R
Sbjct: 104 LGIEGDVIKTN---------TGELTVRAHKITFLSKALR-PLPNKWEGVTDPETI-YRQR 152

Query: 130 FLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187
           +LDL  +    K   +RT II ++R  M    F E  TPIL T +    AR F+      
Sbjct: 153 YLDLISNPESFKRFHQRTAIIKAVREYMDDHGFTEVETPILNTQAGGANARPFVTHHNAL 212

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVE 245
               Y L  A + Y + L+  GF+R +++   FR+E  DP  +    EF  ++   ++ +
Sbjct: 213 DIDMY-LRIATELYLKRLIVGGFERVYELGRIFRNEGMDPHHN---PEFTTMETYAAYFD 268

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIR 284
             D+++  E +++   +  S+   ++          +F RI   DA++
Sbjct: 269 FQDVMDETEGIVKAAAKVVSDDGKITYQGREIDLGGDFKRITMVDAVK 316



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 29/37 (78%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + GMPP GG+  GIDR+VMLL  AK++R+V LFP
Sbjct: 445 QALEYGMPPTGGLGIGIDRLVMLLTDAKSIRDVILFP 481


>gi|159474374|ref|XP_001695300.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii]
 gi|158275783|gb|EDP01558.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii]
          Length = 545

 Score = 73.9 bits (180), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 107/265 (40%), Gaps = 29/265 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF-----EIAKSVRSEWVLCIDG 75
           V +   +H  R  G   FL +R      Q +   D         + A  +  E ++ ++G
Sbjct: 100 VLVRARIHNTRGKGKSAFLVLRQRTATVQAIMFADETTVSKGMVKYATQIPKESIVDVEG 159

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI----------- 124
           +V  +  E          +EL    I  +S A  LP  +       E +           
Sbjct: 160 IV--KVPEKSIDGCSQKDVELQVTGIRAVSRAAVLPFELVDAARSEEEVKAAAERGEVMP 217

Query: 125 ------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                 R   RFLDLR          ++ +    +  ++AE F E  TP L A + EG  
Sbjct: 218 TVGQDLRLDNRFLDLRTPANQAIFKVQSAVCQLFKTTLLAEGFQEIHTPKLIAGASEGGA 277

Query: 179 DFLVPSRVN-QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                 R++  G    L Q+PQ YKQ+ + + F+R F+I P FR E   + R   EF  L
Sbjct: 278 AVF---RLDYMGVPACLAQSPQLYKQMAICADFNRVFEIGPVFRAEFSYTHRHLCEFMGL 334

Query: 238 DMEMSFVEQD-DILNTMENVLRGVF 261
           D+EM+  E   ++L+ +E +   +F
Sbjct: 335 DLEMAIHEHYFEVLDVIEKLFGAIF 359



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E++       GI    +++       +F+ G PPHGG   
Sbjct: 460 YDVFIRGEEIISGAQRVHDPELLTTRAIECGIPLPEIQSYID----SFKYGAPPHGGAGV 515

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML  G  N+R+ S+FP
Sbjct: 516 GLERVVMLYCGLNNIRKTSMFP 537


>gi|314919392|gb|EFS83223.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
          Length = 1081

 Score = 73.9 bits (180), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 124/264 (46%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+   LPL   G  + PE+ + 
Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSL-RPLPLRRSGFND-PEA-KV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|193787014|dbj|BAG51837.1| unnamed protein product [Homo sapiens]
          Length = 477

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 26/256 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVRSEWVLCI 73
           G  +++ GW+  VR    ++ L + D   +   QVVA+   DS       SV       +
Sbjct: 41  GERIKIQGWIRSVRSQKEVLSLHVNDGSSLESLQVVADSGLDSRELTFGSSVE------V 94

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++   ++  N       +EL A+KI+++   +    P+  +  +P     +Y     
Sbjct: 95  QGQLIKSPSKRQN-------VELKAEKIKVIGNCDAKDFPIKYKERHPLEYLRQYPHFRC 147

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVNQ 188
           R + L   +  R+    ++        F+   TPI+T++  EGA +   L PS   +V +
Sbjct: 148 RTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLKVPE 207

Query: 189 GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            +F+ +P       QL   +M+  F + F   P FR E+ ++ R   EFY ++ E+SFV+
Sbjct: 208 ENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQNRRHLAEFYMIEAEISFVD 267

Query: 246 Q-DDILNTMENVLRGV 260
              D++  +E + +  
Sbjct: 268 SLQDLMQVIEELFKAT 283



 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  GG+R      + +  +  G++ EV +      RFG +         PH
Sbjct: 393 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 442

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG   G +R +  +LG  N+++V  FP   + C L
Sbjct: 443 GGFGMGFERYLQCILGVDNIKDVIPFPRFPHSCLL 477


>gi|213400769|gb|ACJ47033.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Onchocerca
           volvulus]
          Length = 121

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 8/125 (6%)

Query: 281 DAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRA 339
           +A+ +YG+DKPDLRNP+ + +VTE F  S+F +F    ++  G  V AIPA K    +R+
Sbjct: 2   EAMLKYGSDKPDLRNPLSISDVTEVFRDSKFNIFKS--NIEKGMVVRAIPAPKTAKESRS 59

Query: 340 FCDRMNEWARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398
           F D+  E  + + G  GL YI    D+ G +   GP+AK  +      IR   +++ GDS
Sbjct: 60  FFDKKIEHVQKEFGAKGLGYI--TFDKDGTIK--GPIAKFFDKNKINHIREITNVKPGDS 115

Query: 399 CFFIA 403
            FF +
Sbjct: 116 IFFTS 120


>gi|312869848|ref|ZP_07729989.1| lysine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094627|gb|EFQ52930.1| lysine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 498

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 32/288 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWV 70
           +++ G  V ++G + R R  G   F D  D  G  QV A  D      + I K       
Sbjct: 51  LNEKGEMVTIAGRMTRKRSSGKAGFADFVDRTGKIQVYARKDMVGDEPYHIFKRADIGDF 110

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYR 129
           L I+G V+  +         TG++ + A KI  LS A   PLP   E    PE+I ++ R
Sbjct: 111 LGIEGDVIKTN---------TGELTVRAHKITFLSKALR-PLPNKWEGVTDPETI-YRQR 159

Query: 130 FLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187
           +LDL  +    K   +RT II ++R  M    F E  TPIL T +    AR F+      
Sbjct: 160 YLDLISNPESFKRFHQRTAIIKAVRKYMDDHGFTEVETPILNTQAGGANARPFVTHHNAL 219

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVE 245
               Y L  A + Y + L+  GF+R +++   FR+E  DP  +    EF  ++   ++ +
Sbjct: 220 DIDMY-LRIATELYLKRLIVGGFERVYELGRIFRNEGMDPHHN---PEFTTMETYAAYFD 275

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIR 284
             D+++  E +++   +  S+   ++          +F RI   DA++
Sbjct: 276 FQDVMDETEGIVKAAAKVVSDDGKITYQGREIDLGGDFKRITMVDAVK 323



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 29/37 (78%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + GMPP GG+  GIDR+VMLL  AK++R+V LFP
Sbjct: 452 QALEYGMPPTGGLGIGIDRLVMLLTDAKSIRDVILFP 488


>gi|289807187|ref|ZP_06537816.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 185

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 55/186 (29%), Positives = 81/186 (43%), Gaps = 2/186 (1%)

Query: 328 AIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386
           A+   GG   +R   D    + +  G  GLAYI       G      PVAK L     EA
Sbjct: 1   ALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVAKFLTADIVEA 60

Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWN 446
           I  R   QDGD  FF A +           R  + ++L + + + +   W++DFP +E +
Sbjct: 61  ILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKDLSLTDEDKWAPLWVIDFPMFE-D 119

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           + E  +   H+PFT P+    S          A  YD+V NG+E+  G +R H  E+   
Sbjct: 120 DGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQT 179

Query: 507 AFSNVG 512
            F  +G
Sbjct: 180 VFGILG 185


>gi|257066135|ref|YP_003152391.1| lysyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798015|gb|ACV28670.1| lysyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 631

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 132/259 (50%), Gaps = 21/259 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75
           G  VR++G +   R HG + F+DI+D  G  Q+V   N     F+  K      ++ I+G
Sbjct: 52  GEKVRIAGRIMAKRGHGNMSFMDIQDEEGQIQIVNRKNVIGDEFKQVKKYDIGDIVGIEG 111

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLR 134
            V   +          G+I +  +   +++ + + LP    G ++ P+ +R++ R+LDL 
Sbjct: 112 KVFKTN---------QGEISIETETPLLMTKSLQMLPEKWHGLKD-PD-LRYRQRYLDLI 160

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV-PSRVNQGSF 191
            +   K++ V+R++II+ +R  +  + F+E  TPIL T +    AR F    + +N G +
Sbjct: 161 VNPEVKSVFVQRSQIISEIRRFLDGQGFLEVETPILNTIAGGATARPFTTHHNSLNIGMY 220

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +  A + Y + L+  GFDR ++I   FR+E   +   P EF  +++  ++ + +D++ 
Sbjct: 221 LRI--ASELYLKRLIVGGFDRVYEIGRMFRNEGMDATHNP-EFTTMELYQAYGDFEDMME 277

Query: 252 TMENVLRGVFEEFSNGNTV 270
             EN++  V  +   G TV
Sbjct: 278 ITENMVEHVANKVK-GTTV 295



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M+L G  ++R+V LFP
Sbjct: 446 ALEIGMPPTGGLGIGIDRLIMILTGQHSIRDVLLFP 481


>gi|91201443|emb|CAJ74503.1| strongly similar to lysyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 477

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 21/244 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77
            + +G +  +RPHG  +FLDIRD  G  QV    D      FEI+  +    +L ++G +
Sbjct: 49  AKAAGRIMTMRPHGKTVFLDIRDRTGKIQVYIKRDKVGEDTFEISHLLDLGDILGVEGTL 108

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RR 135
                        TG+I + A  I +LS +    P    G ++    +R + R++DL   
Sbjct: 109 FKTR---------TGEITIFADNITLLSKSLLNPPEKWHGLKDI--ELRHRQRYVDLFTN 157

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
             + +  +KR +IIN +R  +   +F+E  TP++    P G  AR F+          Y 
Sbjct: 158 QDVMQTFLKRIQIINHIRAFLNERDFVEVETPMM-QPIPGGAVARPFITHHNALDIDLY- 215

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++   
Sbjct: 216 LRIAPELYLKRLLVGGMERVYEINRNFRNEGISTRHNP-EFTMMELYQAYSDYNGMMELT 274

Query: 254 ENVL 257
           E ++
Sbjct: 275 EELI 278



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR++MLL    ++REV LFP+
Sbjct: 436 ALKYGMPPAGGLGIGIDRLIMLLTNNVSIREVILFPL 472


>gi|156387606|ref|XP_001634294.1| predicted protein [Nematostella vectensis]
 gi|156221375|gb|EDO42231.1| predicted protein [Nematostella vectensis]
          Length = 506

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 20/261 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD-HYGITQVVANPDSAC---FEIAKSVRSEWVLC 72
           VG  V +   +H  R  G   F+ +RD  Y +  + A  D       + A  +  E ++ 
Sbjct: 65  VGKRVLVRARIHTSRATGKQCFMTLRDRQYTVQALCAASDVVSKHMVKFAAGINRESIID 124

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES-------- 123
           ++G V + +A+ I +      +E+   K+ ++S++E  LPL +  +   PE+        
Sbjct: 125 VEGEVKA-AAQKIKS-CSQQDVEILVDKLFVISLSEPRLPLQI-EDASRPETDELAHVNQ 181

Query: 124 -IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R   R +DLR             +    R  + ++ F E  TP + +++ EG  +   
Sbjct: 182 DTRLDNRIIDLRTVPNQAIFSIEAGVCKLFREFLDSKGFHEIHTPKIISAASEGGANVFE 241

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            S     +F  L Q+PQ YKQ+ +   FD+ + I   FR ED  + R   EF  LD+EMS
Sbjct: 242 VSYFKGKAF--LAQSPQLYKQMALTGDFDKVYTIGSVFRAEDSNTHRHLTEFIGLDVEMS 299

Query: 243 FVEQ-DDILNTMENVLRGVFE 262
           F E   +++ T+ ++   +F+
Sbjct: 300 FYEHYHEVVRTIGDMFNYIFK 320



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G E+ SG  R H  E + +  S+ GI  E +++       +F+ G PPH G   
Sbjct: 421 YDMFIRGEEVLSGAQRIHDPEKLKERASHHGIDLETIKSYID----SFRYGAPPHAGGGI 476

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+ R+VML L   NVR+ S+FP
Sbjct: 477 GLARVVMLYLDLHNVRKSSMFP 498


>gi|331224927|ref|XP_003325135.1| aspartate-tRNA ligase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309304125|gb|EFP80716.1| aspartate-tRNA ligase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 582

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 35/267 (13%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVV--ANPDSACFEIAK--- 63
           G L    VG  VR+   VH  R     + FL +R      Q +  A   S   ++ K   
Sbjct: 116 GSLQSDHVGERVRIQARVHNSRSQSAKLSFLVLRQQTSTIQAILGATETSVSKQMIKWAI 175

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELP----------- 111
            +  E ++ ++G V+ +  E I    ++ ++E+   KI +L+ A  +LP           
Sbjct: 176 GIPLESIVIVEG-VIQKPIEDIKTCSVS-KLEIKLDKIFLLAQAPAKLPFLLEDASRPVD 233

Query: 112 -LPVFGER--EYPESIRFKYRFLDLRRDTLHKNIVK----------RTRIINSMRCRMIA 158
            LP  GE+        R   R LDLR     +  +K          ++R+ N  R  + +
Sbjct: 234 VLPKEGEQFVTVGTDTRLDNRVLDLRNCDQRQKKMKTPVNQAIFRVQSRVCNLFRTFLDS 293

Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
           E+FIE  TP +  ++ E            Q +F A  Q+PQ  KQ+ +A+ F+R ++I P
Sbjct: 294 EDFIEIHTPKIQGAATESGASVFKLGYFEQTAFLA--QSPQLAKQMAIAADFERVYEIGP 351

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            FR E+  + R   EF  LD+EM+  E
Sbjct: 352 VFRAENSNTYRHMTEFIGLDLEMAIKE 378



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H  E++++      I  + ++    G    F+ G P H G   
Sbjct: 497 YDFFMRGEEIISGAQRIHAPELLIERMKEAKIDPKEMKGYLDG----FKLGCPAHAGGGI 552

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML  G  N+R+  LFP
Sbjct: 553 GLERVVMLFFGLGNIRKACLFP 574


>gi|298529246|ref|ZP_07016649.1| lysyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510682|gb|EFI34585.1| lysyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 508

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 21/257 (8%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVM 78
           R++G +  +R  G +IF  I DH    Q+    D      F++ K +    ++ + G + 
Sbjct: 71  RVAGRIMALRSFGKVIFAHILDHSDRIQIFVQRDMLGENEFKVFKKLDVGDIIGVHGALF 130

Query: 79  SRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                       TG++ + A++I++L+ A   LP    G ++     R++ R++DL  + 
Sbjct: 131 RTR---------TGELTIKAEEIQLLTKAVRPLPEKYHGLKDV--ETRYRQRYVDLIVNP 179

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYAL 194
             K I + R RII  +R  + A +FIE  TP++ A  P GA  R F           Y L
Sbjct: 180 SSKQIFLARNRIIRYIRDFLDARDFIEVETPMMQAI-PGGATARPFNTHHNALDMKLY-L 237

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF++ ++I   FR+E   +   P EF  L+   ++V+  D+++  E
Sbjct: 238 RVAPELYLKRLLVGGFEKVYEINRNFRNEGISTQHNP-EFTMLEFYRAYVDYWDLMDFTE 296

Query: 255 NVLRGVFEEFSNGNTVS 271
            ++ G+    + G  ++
Sbjct: 297 EMISGLCRHMTGGTQIT 313



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP GG   GIDR+VML   + ++REV LFP+
Sbjct: 463 RALEYGMPPAGGEGIGIDRLVMLFTNSASIREVILFPL 500


>gi|255994853|ref|ZP_05427988.1| asparagine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993566|gb|EEU03655.1| asparagine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 462

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 22/255 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  + + GWV  VR    + F++I D  H+   Q V   D   F+ AK +     + + G
Sbjct: 25  GEKIVMQGWVRSVRDSSKLAFMEISDGSHFKPVQAVLEADMKGFDEAKKLPIATAVEVTG 84

Query: 76  -LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            LV++  ++           EL A ++++L+ A+ L  P+  +R   E +R    +L  R
Sbjct: 85  SLVLTPDSKQ--------PFELKADQVKVLAGAD-LMYPLQKKRHSMEFLR-DIAYLRPR 134

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS---- 190
            +T       R+ I +++ C     NF+   TPI+TA+  EGA +    + +        
Sbjct: 135 ANTFQAVFRLRSVIAHALHCFFQDRNFVYSHTPIITANDCEGAGELFRVTTLESNEEDFS 194

Query: 191 --FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             F+A         QL    MA  F   +   P FR E+  + R   EF+ ++ E++F +
Sbjct: 195 KDFFAEKTGLTVSGQLEAEAMALAFRNVYTFGPTFRAENSNTPRHASEFWMIEPEIAFAD 254

Query: 246 QDDILNTMENVLRGV 260
             D ++  E++++ +
Sbjct: 255 LSDDMDLAEDMIKHI 269



 Score = 42.4 bits (98), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF-QCGMPPHGGIA 540
           DL+  G  EI  G  R    +++ +   + GI+ E +       YR   + G   H G  
Sbjct: 377 DLLVPGVGEIIGGSQREERLDILDRRMQDAGINPEEL-----SWYRELRKYGGVKHAGFG 431

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G DRI+M L G KN+R+V  FP +
Sbjct: 432 LGFDRIIMYLTGMKNIRDVIPFPRT 456


>gi|297527051|ref|YP_003669075.1| asparaginyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255967|gb|ADI32176.1| asparaginyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 423

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 125/285 (43%), Gaps = 27/285 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           S VG  V + GW++R    GG  F+ +RD  G+ QVV +      +I ++++    + ++
Sbjct: 4   SFVGRKVCVRGWIYRRSVVGGKAFVRVRDSTGVIQVVVDKKKCGEDIVRTLKD---IGLE 60

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
             V +   E +      G  E+ A   +++  + + P+      +Y        R L +R
Sbjct: 61  ASVKT-CGELVKQPRAPGGYEIQADWFKVVGYSRDFPIKGGEGIDY----LLDNRHLWIR 115

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
              L + +  +  ++ + R   I   + E + PILTAS+ EG    L P +    + Y L
Sbjct: 116 SRKLTETMKIKHSVLRAGREYFIENGWWEVTPPILTASAVEGGAT-LFPVKYFDKTAY-L 173

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y + L+ S  ++ + +   FR E  R+ R   E++ L+ E ++   +D++   E
Sbjct: 174 SQSAQLYLEALIYS-LEKVWSLTTSFRAEKSRTRRHLAEYWHLEAEAAWYNMEDMMRVAE 232

Query: 255 NVLRGVFEEFSN----------------GNTVSNNFLRICYDDAI 283
            ++  + +                     N V   + RI YD+AI
Sbjct: 233 ELVAHIVQYVLEHNRRQLEILGRNLEILKNYVEPPYPRIRYDEAI 277


>gi|152990921|ref|YP_001356643.1| lysyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|151422782|dbj|BAF70286.1| lysyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 502

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 136/291 (46%), Gaps = 21/291 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            D  + V+L+G +  +R  G   F  I D  GI Q+  N DS   E  K V+   ++ + 
Sbjct: 53  KDEKACVKLNGRIKFLRHMGKAAFAKIEDESGIVQIYFNRDSLGDEWFKKVKK--LIEVG 110

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            ++ ++    +     TG++ L A ++ +++ A  +PLP        + +R++ R++DL 
Sbjct: 111 DIIEAKGYPFVTK---TGELTLHANELNLVTKAI-VPLPEKFHGLQDKELRYRQRYVDLI 166

Query: 135 RD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSF 191
            +  + K  + R+RI++ +R    +  F+E  TP++    P GA  R F+          
Sbjct: 167 MNPEVKKVFMLRSRIVSLIRDFFESHGFLEVETPMMH-PIPGGANARPFITHHNALGVDR 225

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+  F+I   FR+E   +   P EF  ++   ++   +D++ 
Sbjct: 226 Y-LRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDATHNP-EFTMIEFYWAYHTYEDLMK 283

Query: 252 TMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293
             E++   +FE+ S    +         S  F +I Y DAI   G    D+
Sbjct: 284 LTEDLFDYLFEKLSLPKKLTYGEHTIDFSTPFSKIKYKDAIIEIGEVPEDI 334



 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 7/90 (7%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGISKEVVENRFG---GLYRAFQCGM 533
           A +++L   G EIA+G   N +++ + Q   F     +KEV +          RA   GM
Sbjct: 403 AERFELFIAGKEIANGF--NELNDPLDQYERFKAQVQAKEVDDEAMHMDEDFVRALGYGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           PP  G   GIDR+VMLL    ++R+V LFP
Sbjct: 461 PPTAGEGIGIDRLVMLLTNQHSIRDVILFP 490


>gi|295110405|emb|CBL24358.1| aspartyl-tRNA synthetase, archaeal type [Ruminococcus obeum A2-162]
          Length = 443

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 115/251 (45%), Gaps = 23/251 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           LG S +   V L G VH +R  G + F+ +R   G+ Q V   + A   +   ++    L
Sbjct: 19  LGTSLLNQEVILEGAVHSIRNMGDVAFVILRRREGLFQAVVENEKANLSV-HDLKEAMTL 77

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRF 130
            + G++                 E+  +++EILS  AE +PL +  + +   S+  K   
Sbjct: 78  RVKGILNEEERAPHGR-------EIRIREVEILSAPAEPMPLAI-DKWKLNTSLEAK--- 126

Query: 131 LDLRRDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           L+LR   L +N+ +R++      +  + R  +  + F E  TP + A   EG  +    S
Sbjct: 127 LNLRPIAL-RNVQERSKFKIQEALTRAFRDFLYEQGFTEIHTPKIGARGAEGGANLFKFS 185

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             ++ +   L Q+PQ YKQ+ M   FDR F+  P FR E   + R   E+  LD EM ++
Sbjct: 186 YFHKPA--VLAQSPQFYKQM-MVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGYI 242

Query: 245 EQDDILNTMEN 255
           +  + +  ME 
Sbjct: 243 DGFEDIMGMET 253



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+ +G E+ +GG R H    +    +  G+ ++ +E         F+ GMPPHGG
Sbjct: 355 TLSFDLLFHGLEVTTGGQRIHDYNQLKAKIAARGMEEDGMEQYLD----TFKHGMPPHGG 410

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +  G++R+ M LLG +NVRE  LFP   N
Sbjct: 411 LGIGLERLTMQLLGEENVREACLFPRDLN 439


>gi|316970288|gb|EFV54261.1| aspartate--tRNA ligase [Trichinella spiralis]
          Length = 487

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 19/247 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVVANPDSACFEIAK---SVRS 67
           LG+   G  V + G +   R  G   F+ IR  HY +   +    +   ++ K   SV  
Sbjct: 39  LGIDMEGKEVWVRGRLQTSRSKGKTCFVVIRHQHYTVQAALFVGRTVTTDMLKFVSSVSR 98

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVF-GEREYPE--- 122
           E ++ I G V  R  E    +     IEL   +  ++S A   LPL +    R   E   
Sbjct: 99  ESIVDIYGTV--RRVEQKITSCSQDSIELHVNRFWVVSSAVPRLPLQIEDAARGIVEGDP 156

Query: 123 ------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                   R   R LDLR  T       +  + +  R  + +  F+E  TP + +++ EG
Sbjct: 157 LSHVNLDTRLDNRVLDLRTVTSQAIFRLQAVVCDQFRKYLTSNGFVEIHTPKIISAASEG 216

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +    S   + ++  L Q+PQ YKQ+ +A  F R F I   FR ED  + R   EF  
Sbjct: 217 GANVFEVSYFKRSAY--LAQSPQLYKQMAIAGDFGRVFTIGSVFRAEDSNTHRHLTEFIG 274

Query: 237 LDMEMSF 243
           LD+EM+F
Sbjct: 275 LDLEMAF 281



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++++   +  I  + +E        +F+ G PPH G   
Sbjct: 402 YDMYMRGEEILSGAQRIHNPDLLIERAKHHNIDLKKIE----AYIDSFRYGCPPHAGGGI 457

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR  S+FP
Sbjct: 458 GLERVTMLYLGLSNVRLASMFP 479


>gi|255086471|ref|XP_002509202.1| predicted protein [Micromonas sp. RCC299]
 gi|226524480|gb|ACO70460.1| predicted protein [Micromonas sp. RCC299]
          Length = 405

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 21/216 (9%)

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPE 122
           ++  E V+ I GLVM+  +  + +      +EL AQ I  +S +E  LP  +  +   PE
Sbjct: 7   NLTKESVVDIQGLVMAPESGKVES-CTQQDVELVAQSIYCVSRSEPRLPFEI-DDASRPE 64

Query: 123 S---------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
           +                R  +R +DLR          ++ +    R  + A++F+E  TP
Sbjct: 65  TDFDKEDTTYVRVGQDTRLNHRVIDLRTPANQAIFRIQSAVCELFRDALRAQDFVEIHTP 124

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            L   + EG         + Q +   L Q+PQ YKQ+ + S  +R F+I P FR E+  +
Sbjct: 125 KLIGGASEGGASVFKLDYMGQPA--CLAQSPQLYKQMAVESDLERVFEIGPVFRAENSNT 182

Query: 228 DRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFE 262
            R   EF  LDMEM+  E   ++L+ ++N+   +F+
Sbjct: 183 HRHLCEFTGLDMEMAIKEHYFEVLDVLDNLFLHMFD 218



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H   ++ +     GI  + ++        AF+ G  PHGG   
Sbjct: 320 YDIFIRGEEIISGAQRIHDPALLTKRAVECGIEVDTIQ----AYIDAFKYGALPHGGCGV 375

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML L   N+R+ S+FP
Sbjct: 376 GLERVVMLFLNLGNIRKTSMFP 397


>gi|194467683|ref|ZP_03073670.1| lysyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454719|gb|EDX43616.1| lysyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 508

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 157/368 (42%), Gaps = 54/368 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWV 70
           ++++G+ V ++G + R R  G   F D  D  G  QV A  D      + + K       
Sbjct: 51  LNEMGAKVIIAGRMTRKRSSGKAGFADFVDRTGKIQVYARKDMVGDEPYHVFKRSDIGDF 110

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L I+G V+            TG++ + A KI  LS A   PLP  +     PE+I ++ R
Sbjct: 111 LGIEGDVIKTD---------TGELTVRAHKITFLSKALR-PLPNKWDGVTDPETI-YRQR 159

Query: 130 FLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187
           +LDL  +    K   +RT II ++R  M    F E  TPIL T +    AR F+      
Sbjct: 160 YLDLISNPESFKRFHQRTAIIKAVRKYMDDNGFTEVETPILNTQAGGANARPFITHHNAL 219

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVE 245
               Y L  A + Y + L+  GF+R +++   FR+E  DP  +    EF  ++   ++ +
Sbjct: 220 DIDMY-LRIATELYLKRLIVGGFERVYELGRIFRNEGMDPHHN---PEFTTMETYAAYFD 275

Query: 246 QDDILNTMENVLRGVFEEFSN-------GNTVS--NNFLRICYDDAIR-RYGTD------ 289
             D+++  E +++   +  S+       GN +    NF RI   DA++ + G D      
Sbjct: 276 FQDVMDETEGIVKAAAKVVSDDGKITYQGNEIDLGGNFKRITMVDAVKEKTGIDFSDESM 335

Query: 290 -KPDLRNPIIMHNV-------TEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGG 335
              D +     H V         H +++ F  F +   + P + V+  P      AK   
Sbjct: 336 TDEDAKKLADEHKVEYKPYWTKGHILNAFFEEFVEDTLIQPTF-VYEFPVEVSPLAKRNA 394

Query: 336 GNRAFCDR 343
            N A  DR
Sbjct: 395 DNPAMTDR 402



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 29/37 (78%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + GMPP GG+  GIDR+VMLL  AK++R+V LFP
Sbjct: 452 QALEYGMPPTGGLGIGIDRLVMLLTDAKSIRDVILFP 488


>gi|256544718|ref|ZP_05472090.1| lysine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256399607|gb|EEU13212.1| lysine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 637

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 35/287 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75
           G  VR++G +   R HG + F+D++D  G  QVV   N     F+  K      ++ I+G
Sbjct: 53  GKIVRVAGRIMARRGHGNMSFMDVQDSLGQIQVVNRKNIMGDNFKETKGYDIGDIIGIEG 112

Query: 76  LVMSR-----SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            V        S ET +A+++T  +++             LP    G ++ P+ IR++ R+
Sbjct: 113 KVFKTNQGEISIETEHADLLTKSLQI-------------LPEKWHGLKD-PD-IRYRQRY 157

Query: 131 LDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQ 188
           +DL  +   K++ V R++II+ +R  +    F+E  TPIL T +    AR F+       
Sbjct: 158 VDLIVNPEVKDVFVLRSKIISEIRKFLENRGFLEVETPILNTIAGGASARPFITHHNSLD 217

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  A + Y + L+  GFD+ ++I   FR+E   +   P EF  +++  ++ + +D
Sbjct: 218 IGMY-LRIASELYLKRLIVGGFDKVYEIGRMFRNEGMDATHNP-EFTTMELYQAYGDFED 275

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           ++   E ++  V  +      V  +         + RI   DA++ Y
Sbjct: 276 MMEITETMVEEVANKVKGTTLVEFDGKEIELKTPWKRISMIDAVKEY 322



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M+L G +++R+V LFP
Sbjct: 447 ALEVGMPPTGGLGIGIDRLIMILTGQRSIRDVLLFP 482


>gi|218512516|ref|ZP_03509356.1| aspartyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 42

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/42 (66%), Positives = 36/42 (85%)

Query: 1  MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIR 42
          MHRYR+H+C  L  +DVGS VR+SGWVHRVR HGG++F+D+R
Sbjct: 1  MHRYRSHTCAALRKTDVGSTVRISGWVHRVRDHGGVLFIDLR 42


>gi|46110188|ref|XP_382152.1| hypothetical protein FG01976.1 [Gibberella zeae PH-1]
          Length = 1033

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 123/268 (45%), Gaps = 14/268 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACF 59
           +H    ++   L     G+ V     +   RP   ++ FL +RD     Q V   D+   
Sbjct: 259 VHPGEINTIAQLDTLPFGTEVTFRARIETQRPISKVLDFLLLRDQTHSVQGVLARDAGNA 318

Query: 60  EIAKSVR---SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           +    VR   SE ++ I G  + +  E I +   +G +E++   + ++++A+ LP   F 
Sbjct: 319 DFISWVRKINSESLVQITG-TLKQPPEPIRSATHSG-VEVAVDSVHLVNLAQNLP---FS 373

Query: 117 EREYPESIR--FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
             + PE++R     R LDLR  +       R  +    R  +    F+E +TP L  ++ 
Sbjct: 374 NYKPPETLRNRMNARILDLRHPSNQALFRVRAMVTRVFRNTLEEHGFVEINTPKLQPAAT 433

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           E        +   + +F A  Q+PQ  KQ  +++ F R F++ P FR E+  + R   E+
Sbjct: 434 ESGAAVFPVNYFGRRAFLA--QSPQLAKQEAISADFGRVFEVGPVFRAENSNTHRHLTEY 491

Query: 235 YQLDMEMSF-VEQDDILNTMENVLRGVF 261
             LD+EM+   +  ++++ ++  L+ VF
Sbjct: 492 TGLDLEMAIDTDYHEVISFIDIFLKEVF 519



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H  + +    +  G++++ +E+       AF+ G PPH G   
Sbjct: 618 FDIFIRGQEICSGGQRIHNVDELRANMAEAGMAEDGMEDYLT----AFELGAPPHAGAGL 673

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++RIV  +L   +VR  SLF
Sbjct: 674 GLERIVAWMLELGDVRYASLF 694


>gi|148543508|ref|YP_001270878.1| lysyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184152915|ref|YP_001841256.1| lysyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227363657|ref|ZP_03847771.1| lysine--tRNA ligase [Lactobacillus reuteri MM2-3]
 gi|325681852|ref|ZP_08161371.1| lysine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|148530542|gb|ABQ82541.1| lysyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224259|dbj|BAG24776.1| lysyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071326|gb|EEI09635.1| lysine--tRNA ligase [Lactobacillus reuteri MM2-3]
 gi|324978943|gb|EGC15891.1| lysine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 508

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 156/368 (42%), Gaps = 54/368 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWV 70
           ++++G+ V ++G + R R  G   F D  D  G  QV A  D      + + K       
Sbjct: 51  LNEMGAKVIIAGRMTRKRSSGKAGFADFVDRTGKIQVYARKDMVGDEPYHVFKRSDIGDF 110

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L I+G V+            TG++ + A KI  LS A   PLP  +     PE+I ++ R
Sbjct: 111 LGIEGDVIKTD---------TGELTVRAHKITFLSKALR-PLPNKWDGVTDPETI-YRQR 159

Query: 130 FLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187
           +LDL  +    K   +RT II ++R  M    F E  TPIL T +    AR F+      
Sbjct: 160 YLDLISNPESFKRFHQRTAIIKAVRKYMDDNGFTEVETPILNTQAGGANARPFITHHNAL 219

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVE 245
               Y L  A + Y + L+  GF+R +++   FR+E  DP  +    EF  ++   ++ +
Sbjct: 220 DIDMY-LRIATELYLKRLIVGGFERVYELGRIFRNEGMDPHHN---PEFTTMETYAAYFD 275

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIR-RYGTD------ 289
             D+++  E +++   +  S+   ++          NF RI   DA++ + G D      
Sbjct: 276 FQDVMDETEGIVKAAAKVVSDDGKITYQGHEIDLGGNFKRITMVDAVKEKTGIDFSDESM 335

Query: 290 -KPDLRNPIIMHNV-------TEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGG 335
              D +     H V         H +++ F  F +   + P + V+  P      AK   
Sbjct: 336 TDEDAKKLADEHKVEYKPYWTKGHILNAFFEEFVEDTLIQPTF-VYEFPVEVSPLAKRNA 394

Query: 336 GNRAFCDR 343
            N A  DR
Sbjct: 395 DNPAMTDR 402



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 29/37 (78%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + GMPP GG+  GIDR+VMLL  AK++R+V LFP
Sbjct: 452 QALEYGMPPTGGLGIGIDRLVMLLTDAKSIRDVILFP 488


>gi|254565875|ref|XP_002490048.1| Cytosolic asparaginyl-tRNA synthetase, required for protein
           synthesis [Pichia pastoris GS115]
 gi|238029844|emb|CAY67767.1| Cytosolic asparaginyl-tRNA synthetase, required for protein
           synthesis [Pichia pastoris GS115]
 gi|328350452|emb|CCA36852.1| asparaginyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 551

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 112/245 (45%), Gaps = 11/245 (4%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           ++G+ VR+ GW+HR+R   G++F+ +RD  G  Q + + D A      ++  E  + + G
Sbjct: 124 NLGTRVRVHGWIHRLRAQKGLVFIVLRDGTGFLQCLLSGDLANAYQTSTLTLESTVTLKG 183

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLD 132
           +V    A         G +EL     EI+ +A   ++       E   P S+    R L 
Sbjct: 184 IVEKLPA----GKQAPGGVELKVDYYEIIGLAPAGDDCFSNKIQEGADP-SLLLDQRHLA 238

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +TL   +  R  ++ ++R     E  IE + P +  +  EG           + ++ 
Sbjct: 239 IRGETLSAVLKVRASLLQAIRRVYDEEGVIEVTPPCMVQTQVEGGSTLFKLQYYGEEAY- 297

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  + +  D Y  I   FR E   + R   E+  ++ E++F+  +D+L+ 
Sbjct: 298 -LTQSSQLYLETALPALGDVYC-IQESFRAEKSHTRRHLSEYTHIEAELAFLTFEDLLSH 355

Query: 253 MENVL 257
           +E V+
Sbjct: 356 IERVI 360


>gi|71661457|ref|XP_817749.1| aspartyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70882960|gb|EAN95898.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 534

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 14/252 (5%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSV 65
           S   LG +      R+ G V   R  G I F+ +R    + I QVVA+       + K +
Sbjct: 34  SLTSLGATAAKPATRIRGRVETTRVRGKIAFIHLRQPPCHSI-QVVASAADIVRRV-KEL 91

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESI 124
             E ++   G ++       +A+      EL A++++++S  A  LP P+       ++ 
Sbjct: 92  TPESIIDATGTLVPAERPVTSASC--KNYELHAERVDVVSRAATPLPFPIKDCNTRLDT- 148

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  +R +D+R       +   + +    R +++A +F+E  TP +  ++ EG        
Sbjct: 149 RLNHRVVDMRTPLTASVLRLVSAVCQCFRKQLLARDFVEIHTPKMLGAASEGGSAVFTID 208

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD----ME 240
              Q  + A  Q+PQ YKQ+++     R F+I P FR E   + R   EF  LD    +E
Sbjct: 209 YFGQRGYLA--QSPQLYKQMVLMGDAMRVFEIGPVFRAEKSLTHRHLTEFVGLDAEFVIE 266

Query: 241 MSFVEQDDILNT 252
            S+ E  D+L +
Sbjct: 267 HSYTEVLDVLES 278



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H   ++LQ    + +    +++       AF+ G  PHGG   
Sbjct: 449 FDMYLRGEEICSGAQRIHDITLLLQNMERLQVDAASLKDYVD----AFRYGAWPHGGFGL 504

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV+ LLGAK++R++SLFP
Sbjct: 505 GLERIVLFLLGAKDIRQISLFP 526


>gi|315095041|gb|EFT67017.1| lysyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|327328181|gb|EGE69950.1| lysine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 1081

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   DS   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDSMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HT-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|59801828|ref|YP_208540.1| putative aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|59718723|gb|AAW90128.1| putative aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 84

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 1/77 (1%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
          RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2  RTNYCGLISEQYLCQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64 SVRSEWVLCIDGLVMSR 80
          S R+E+VL I G V +R
Sbjct: 62 SARNEYVLGIAGRVRNR 78


>gi|268317015|ref|YP_003290734.1| asparaginyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262334549|gb|ACY48346.1| asparaginyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 501

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 129/294 (43%), Gaps = 35/294 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANP--DSACFEIAKSVRSEWVLCI 73
           VG  V L GW++  R   G+ FL +RD  G+ Q VVA    D+  +++A+    E  L +
Sbjct: 15  VGQTVTLKGWLYNKRSSKGLHFLILRDGTGLVQCVVAQDRVDADTWQVAEEATQECSLEV 74

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF--KYRFL 131
            G V+ R    I  +      E+  ++++++  +E  P+        P  I F   +R L
Sbjct: 75  VGTVV-RDERQIGGH------EVHVERLQLIGPSENYPIT-----PKPHGIEFLMDHRHL 122

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR       +  R R+I ++        F++   PILT ++ EG             ++
Sbjct: 123 WLRSRRPWAIMRIRNRVIRAIHDFFQERGFLQLDAPILTGNAVEGTTTLFEIDYFGDKAY 182

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE------ 245
             L Q+ Q Y +  MA  F + +   P FR E  ++ R   EF+ ++ EM+F +      
Sbjct: 183 --LSQSGQLYAE-AMAMAFGKVYTFGPTFRAEKSKTRRHLTEFWMIEPEMAFYDLEMNMA 239

Query: 246 --QDDILNTMENVLRGVFEEF-------SNGNTVSNNFLRICYDDAIRRYGTDK 290
             ++ +++ ++ VLR    E        +    V   F R+ Y +A+    +D+
Sbjct: 240 LAEELVVHIVQEVLRHCRTELEVLGRDIAALERVQPPFPRLTYSEAVELLRSDE 293


>gi|78189143|ref|YP_379481.1| lysyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|123729854|sp|Q3ARD7|SYK_CHLCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78171342|gb|ABB28438.1| Lysyl-tRNA synthetase, class-2 [Chlorobium chlorochromatii CaD3]
          Length = 511

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 138/298 (46%), Gaps = 35/298 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +  +R  G   F +++D  G  Q+    D    ++ ++  + + L   G ++  
Sbjct: 67  VAVAGRIMTIRKMGKASFFNVQDSAGRIQIYLKKD----DVGEAAYNMFKLLDIGDIVGV 122

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----------ESIRFKYR 129
           +  T      TG+I + A+ +E+L+ +   P+P+  E+E             + +R++ R
Sbjct: 123 TGYTFRTK--TGEISIHAESLELLTKSLR-PIPIAKEKEVDGEKVVFDAFSDKELRYRQR 179

Query: 130 FLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL  +  + +  +KRT I+ +MR       ++E  TPIL        AR F       
Sbjct: 180 YVDLIVNPEVRETFIKRTAIVAAMRNFFARHGWLEVETPILQPIYGGAAARPFTTHHNAL 239

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDMEMSFVEQ 246
               Y L  A + Y + L+  GFD  F+ A  FR+E    DR    EF Q+++ +++ + 
Sbjct: 240 DMQLY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEG--IDRFHNPEFTQVELYVAYKDY 296

Query: 247 DDILNTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRRYGTDKPDLRN 295
           + ++N +E ++     E +  +T         V   F R+   DAI  Y TDK D+RN
Sbjct: 297 NWMMNLVEELIYTTAMEVNKSDTTTFLGHEISVKPPFRRLTISDAIAEY-TDK-DIRN 352



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  GIDR+VMLL G +++R+V  FP
Sbjct: 470 RAIEYGMPPCAGLGVGIDRLVMLLTGQESIRDVIFFP 506


>gi|310778303|ref|YP_003966636.1| lysyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747626|gb|ADO82288.1| lysyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 494

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 19/274 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDG-LV 77
           + +G +   R  G  +F  I D  G  QV    D+     FEI K + +   + ++G L 
Sbjct: 59  KTAGRIMACRGQGKAVFAHIEDETGRIQVYLRKDTLGDKVFEIVKKMGTGDFVGVEGSLF 118

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +++           G++ L     E LS     PLP           R++ R+LDL  + 
Sbjct: 119 VTKK----------GELTLRVAGFEFLS-KNIRPLPEKYHGLTDVETRYRKRYLDLVMNK 167

Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
            + +  VKR +I+NS++  + ++ F+E  TPI+        A+ F+        + Y L 
Sbjct: 168 EVKETFVKRIQIVNSVKTLLNSKGFMEVETPIMHPIVGGASAKPFVTHHNTLDMTLY-LR 226

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GFD+ ++I   FR+E   +   P EF  +++  ++ + +D+++  E 
Sbjct: 227 IAPELYLKRLIVGGFDKVYEINRSFRNEGISTRHNP-EFTMMELYQAYADFNDMMDLTEE 285

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
           ++    +  +   TV  N   +  ++  R +  D
Sbjct: 286 IIMNAAKTINGTTTVEYNGKELVLENFKRVHMVD 319



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 9/71 (12%)

Query: 494 GGIRNHMSEVML-QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           G +   + E ML    +N  I  + +E        A + GMPP GG+  GIDR+VMLL G
Sbjct: 426 GRLEAQLEEAMLGNEEANAEIDDDYIE--------ALEYGMPPTGGLGVGIDRLVMLLTG 477

Query: 553 AKNVREVSLFP 563
           A ++R+V LFP
Sbjct: 478 APSIRDVILFP 488


>gi|190345858|gb|EDK37816.2| hypothetical protein PGUG_01914 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 432

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 114/250 (45%), Gaps = 23/250 (9%)

Query: 36  IIFLDIRDHYGITQVVANPD-----SACFEIAKSVRSEWVLCIDGLVMSRSAETINANII 90
           + FL +R    + Q +   D         + A S+  E ++ + G V        +A + 
Sbjct: 1   MAFLTLRQQSELIQCLIKADGEQVSKQMVKFAGSINLESIVVVHGEVRKVEEPIKSATVQ 60

Query: 91  TGQIELSAQKIEILSVA-EELPLPVF-GEREYPES-----------IRFKYRFLDLRRDT 137
             +I +S  KI ++S A E+LP+ +    R   E+            R   R +DLR  T
Sbjct: 61  DAEIHVS--KIYVISAAPEQLPILIEDASRSDAEAEAAGLPVVNLDTRLDARVIDLRTTT 118

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  +  +    R  +  + F+E  TP L  ++ EG  +    +     ++  L Q+
Sbjct: 119 NQAIFKIQAGVGKLFREFLDKKGFVEIHTPKLLGAATEGGANVFEVTYFKSSAY--LAQS 176

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENV 256
           PQ YKQ L+A+ F++ +++AP FR E+  + R   EF  +D+EM+F E   ++L+ + ++
Sbjct: 177 PQFYKQQLIAADFEKVYEVAPVFRAENSNTHRHMTEFMGMDLEMTFEEHYHEVLDNLADL 236

Query: 257 LRGVFEEFSN 266
              +F E  +
Sbjct: 237 FVYIFSELKS 246



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H  E++ +   ++ I              AF  G PPH G   
Sbjct: 345 YDFFMRGEEIMSGAQRIHDPELLKKRMIDLDIDPNA--PGLSDYIDAFTYGCPPHAGGGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++M  L  KN+R  SLFP
Sbjct: 403 GLERVLMFYLDLKNIRRASLFP 424


>gi|314966150|gb|EFT10249.1| lysyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
          Length = 1081

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   DS   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDSMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HT-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|258647028|ref|ZP_05734497.1| lysine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260404469|gb|EEW98016.1| lysine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 497

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 139/320 (43%), Gaps = 29/320 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74
           G  V+++G +  +R HG   F  +RD  G  Q+    D+     + + K V    +L ++
Sbjct: 51  GEHVKVAGRIMIIRGHGKTAFCTLRDEKGDIQLYFRKDTVSENEWNLFKLVDMGDILGVE 110

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V +           TG+  +      +LS +   PLP        +  R++ R+LDL 
Sbjct: 111 GTVFTTH---------TGETTIRVLHFTMLSKSLR-PLPEKWHGLTDKEQRYRQRYLDLI 160

Query: 135 RD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +  + K  +KR  ++ ++R    A  F+E  TP+L        AR F+        + Y
Sbjct: 161 ANPDVRKTFIKRANMLQAIRNWYTAHGFLEVETPVLQPLYGGANARPFMTHFNALDMTMY 220

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  G++R F+I   FR+E   +   P EF  ++   ++ + DD+++ 
Sbjct: 221 -LRIAPELYLKRLLVGGYERIFEITRNFRNEGMDTRHNP-EFTAIETYQAYGDIDDVIDQ 278

Query: 253 MENVLRGV------FEEFSNGNT---VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            E ++           +F+   T   V+  + R+   +A+++Y  +  D    I      
Sbjct: 279 TEQIVAACAMASYGTTKFTYEGTEIDVAGPWPRLTMAEAVKKYTGEDFDACKTIEEARAI 338

Query: 304 ---EHFVHSEFRVFSKILSV 320
               H  + EF  F K+L+ 
Sbjct: 339 CDRLHVEYGEFDGFGKLLAA 358



 Score = 44.7 bits (104), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+ ML+  + ++R++ LFP
Sbjct: 448 ALEYGMPPTGGLGIGLDRLFMLMTNSSSIRDILLFP 483


>gi|146295866|ref|YP_001179637.1| lysyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145409442|gb|ABP66446.1| lysyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 495

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 131/289 (45%), Gaps = 30/289 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G FV ++G +   R HG   F+DI D  G  Q+    D    E  +  +  + +   G +
Sbjct: 56  GQFVSVAGRMLSKRGHGKASFVDILDPKGKIQIYIKIDEVGEEKYQEFKEYYDI---GDI 112

Query: 78  MSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL--- 133
           +    E    +   G+I + A++IE+L+     LP    G R+     R++ R+LDL   
Sbjct: 113 IGVKGEVFKTH--KGEISIKAKEIEMLTKCLRPLPEKWHGLRDV--DTRYRKRYLDLIVN 168

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
              RDT     +KR+ +I S+R  +    F+E  TP+L+  +    AR F+         
Sbjct: 169 HQVRDTF----IKRSLMIRSIRKYLDDRGFLEVETPVLSPIAGGAAARPFITHHNALDID 224

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + + + L+  GFD+ +++   FR+E       P EF  +++  ++ +  D++
Sbjct: 225 LY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIYQAYADYKDMM 282

Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTD 289
           N  E ++  V +E      ++           + R+   DAI++Y G D
Sbjct: 283 NLTEELITTVAKEVLGTLKITYQGQEIDLTPPWQRLTMIDAIKKYVGVD 331



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 454 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFP 489


>gi|71653289|ref|XP_815284.1| aspartyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70880329|gb|EAN93433.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 534

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 14/239 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
            R+ G V   R  G I F+ +R    + I QVVA+       + K +  E ++   G ++
Sbjct: 47  TRIRGRVETTRIRGKIAFIHLRQPPCHSI-QVVASAADIVRRV-KELTPESIIDATGTLV 104

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              AE    ++     EL A++++++S  A  LP P+  +       R  +R +D+R   
Sbjct: 105 P--AERPVTSVSCKNYELHAERVDVVSRAATPLPFPI-KDCNTKLDTRLNHRVMDMRTPL 161

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +   + +    R +++A  F+E  TP + A++ EG           Q  + A  Q+
Sbjct: 162 TASVLRLVSAVCQCFRKQLLAREFVEIHTPKMLAAASEGGSAVFTIDYFGQRGYLA--QS 219

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD----MEMSFVEQDDILNT 252
           PQ YKQ+++     R F+I P FR E   + R   EF  LD    +E S+ E  D+L +
Sbjct: 220 PQLYKQMVLMGDAMRVFEIGPVFRAEKSLTHRHLTEFVGLDAEFVIEHSYTEVLDVLES 278



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 12/86 (13%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHG 537
           +D+   G EI SG  R H   ++LQ    + +     KE V+        AF+ G  PHG
Sbjct: 449 FDMYLRGEEICSGSQRIHDITLLLQNMERLQVDAASLKEYVD--------AFRYGAWPHG 500

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G++RIV+ LLGAK++R++SLFP
Sbjct: 501 GFGLGLERIVLFLLGAKDIRQISLFP 526


>gi|17231150|ref|NP_487698.1| asparaginyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|20139875|sp|P58692|SYN_ANASP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|17132791|dbj|BAB75357.1| asparaginyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 463

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 127/308 (41%), Gaps = 59/308 (19%)

Query: 23  LSGWVHRVRPHGGIIFLDIRD--HYGITQVVAN---PDSACFEIAKSVRSEWVLCIDGLV 77
           + GWV   R   G  F+++ D    G  QVV N   PD A   I K + +   + ++G++
Sbjct: 21  VQGWVRTKRELKGFAFIEVNDGSSLGNLQVVINQDLPDYAV--IVKQLNTGASVEVNGVL 78

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++   +        GQ IEL A+ +++   A+    P+  +R    S  F      LR  
Sbjct: 79  VASQGK--------GQRIELKAEAVKVYGEADPETYPLQKKRH---SFEFLRTIGHLRSR 127

Query: 137 TLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSR 185
           T     V R R   S       +   F+   TPI+TAS  EGA +           +P  
Sbjct: 128 TNSFGAVFRVRNACSAAIHQFFQERGFLWVHTPIITASDCEGAGELFSVTSLDLKQIPRT 187

Query: 186 VNQG-----SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            NQG      F+A P       QL   +MA  F   +   P FR E+  + R   EF+ +
Sbjct: 188 ENQGIDYSQDFFAKPTYLTVSGQLEAEVMAMAFSNVYTFGPTFRAENSNTSRHLAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLR 276
           + EM+F + +  ++  E  L+ +F           EF N            N ++N F R
Sbjct: 248 EPEMAFCDLEGDMDLAEAFLKHIFNHVLEKCPEDMEFFNQRIDNTVLATAENIINNQFER 307

Query: 277 ICYDDAIR 284
           + Y DAI+
Sbjct: 308 LTYTDAIK 315


>gi|314923836|gb|EFS87667.1| lysyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
          Length = 1081

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   DS   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDSMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HT-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|315104379|gb|EFT76355.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
          Length = 1081

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   DS   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDSMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HT-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|291525649|emb|CBK91236.1| aspartyl-tRNA synthetase, archaeal type [Eubacterium rectale DSM
           17629]
          Length = 443

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 133/327 (40%), Gaps = 33/327 (10%)

Query: 11  DLGVSDV------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           DLG++++      G  +++ G +H +R  G + F+ +R   G+ Q V  P  + F +   
Sbjct: 12  DLGIAEILAGDYEGKNIKVKGAIHTIRDMGEVAFIVLRRRDGLVQCVYEPGKSQFSVDDL 71

Query: 65  VRSEWV-LCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPE 122
             ++ V +C  G   S    ++N        EL    I ILS  AE +PL +  + +   
Sbjct: 72  KEADTVEVC--GTYKS-DDRSLNG------FELRLDTIIILSEPAEPMPLQI-NKWKLNT 121

Query: 123 SIRFKY--RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           S+  K   R + LR          +  I    R  +    F E  TP L A S EG  + 
Sbjct: 122 SLEAKLNNRAVALRNPRERATFRIQEGITRGFRDFLYNNGFTEIHTPKLGAKSAEGGANL 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 ++ +   L Q+PQ YKQ+ M   FDR F+ AP FR E   + R   E+  LD E
Sbjct: 182 FKLEYFHRPAI--LQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFE 238

Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           M +++  +DI+      L+   E            L+I   D      T  P +R     
Sbjct: 239 MGYIDGFEDIMEMETGFLQYTMELLKTSYAKELELLKIKLPDV-----TSIPRVRFDEAK 293

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEV 326
             V E +     R F     + P  EV
Sbjct: 294 QRVAEKYN----RQFRNPFDLEPEEEV 316



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EI +GG R H    +++  +  G+  E +E+       AF+ GMPPHGG
Sbjct: 355 TLSFDLLFRGLEITTGGQRIHDYNKLMEKIAKRGMETEGMESYLS----AFKHGMPPHGG 410

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M L+G  NVRE +LFP
Sbjct: 411 LGIGLERLTMQLIGEDNVREATLFP 435


>gi|126466260|ref|YP_001041369.1| asparaginyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126015083|gb|ABN70461.1| asparaginyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 436

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 125/283 (44%), Gaps = 27/283 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V + GW++R    GG  F+ +R   GI QVV + +    EI + ++    + ++  
Sbjct: 19  IGKKVCVRGWIYRRSVVGGKAFVRVRGSTGIIQVVVDREKCGEEIVRILKD---IGLEAS 75

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           VM+   E +      G  E+ A    I+  + + P+      +Y        R L +R  
Sbjct: 76  VMT-CGELVKQPRAPGGYEVHADWFRIVGYSRDFPIKGGEGIDY----LLDNRHLWIRSR 130

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            L + +  +  ++ + R   +  ++ E + PILTAS+ EG    L P +    + Y L Q
Sbjct: 131 KLTEIMKIKHSVLKAGREYFVENDWWEVTPPILTASAVEGGAT-LFPVKYFDKTAY-LSQ 188

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y + L+ S  ++ + +   FR E  R+ R   E++ L+ E ++   +D++   E +
Sbjct: 189 SAQLYLEALIYS-LEKVWSLTTSFRAEKSRTRRHLAEYWHLEAEAAWYNMEDMMRVAEEL 247

Query: 257 LRGVFEEFSN----------------GNTVSNNFLRICYDDAI 283
           +  + +                     N+V   + RI YD+AI
Sbjct: 248 VAYIVQYILEHNKRQLEILGRDLKILKNSVEPPYPRIRYDEAI 290


>gi|75909835|ref|YP_324131.1| asparaginyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|75703560|gb|ABA23236.1| Asparaginyl-tRNA synthetase, class IIb [Anabaena variabilis ATCC
           29413]
          Length = 463

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 127/308 (41%), Gaps = 59/308 (19%)

Query: 23  LSGWVHRVRPHGGIIFLDIRD--HYGITQVVAN---PDSACFEIAKSVRSEWVLCIDGLV 77
           + GWV   R   G  F+++ D    G  QVV N   PD A   I K + +   + ++G++
Sbjct: 21  VQGWVRTKRELKGFAFIEVNDGSSLGNLQVVINQDLPDYAV--IVKQLNTGASVEVNGVL 78

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++   +        GQ IEL A+ +++   A+    P+  +R    S  F      LR  
Sbjct: 79  VASQGK--------GQRIELKAEAVKVYGEADPETYPLQKKRH---SFEFLRTIGHLRSR 127

Query: 137 TLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSR 185
           T     V R R   S       +   F+   TPI+TAS  EGA +           +P  
Sbjct: 128 TNSFGAVFRVRNACSAAIHQFFQERGFLWVHTPIITASDCEGAGELFSVTSLDLKQIPRT 187

Query: 186 VNQG-----SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            NQG      F+A P       QL   +MA  F   +   P FR E+  + R   EF+ +
Sbjct: 188 ENQGIDYSQDFFAKPTYLTVSGQLEAEVMAMAFSNVYTFGPTFRAENSNTSRHLAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLR 276
           + EM+F + +  ++  E  L+ +F           EF N            N ++N F R
Sbjct: 248 EPEMAFCDLEGDMDLAEAFLKHIFNHVLEKCPEDMEFFNQRIDNTVLATAENIINNQFER 307

Query: 277 ICYDDAIR 284
           + Y DAI+
Sbjct: 308 LTYTDAIK 315


>gi|6323011|ref|NP_013083.1| Dps1p [Saccharomyces cerevisiae S288c]
 gi|135100|sp|P04802|SYDC_YEAST RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3370|emb|CAA27269.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|3411|emb|CAA29865.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|1297012|emb|CAA66172.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|1360191|emb|CAA97464.1| DPS1 [Saccharomyces cerevisiae]
 gi|151941152|gb|EDN59530.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
 gi|190406028|gb|EDV09295.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|207343237|gb|EDZ70762.1| YLL018Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256272328|gb|EEU07312.1| Dps1p [Saccharomyces cerevisiae JAY291]
 gi|259147973|emb|CAY81222.1| Dps1p [Saccharomyces cerevisiae EC1118]
 gi|285813406|tpg|DAA09302.1| TPA: Dps1p [Saccharomyces cerevisiae S288c]
 gi|323303944|gb|EGA57724.1| Dps1p [Saccharomyces cerevisiae FostersB]
 gi|323332606|gb|EGA74013.1| Dps1p [Saccharomyces cerevisiae AWRI796]
 gi|323336545|gb|EGA77811.1| Dps1p [Saccharomyces cerevisiae Vin13]
 gi|323347600|gb|EGA81867.1| Dps1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 557

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 113/275 (41%), Gaps = 31/275 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPDSAC----FEIAKSVR 66
             D    V     VH  R  G  + FL +R    + Q  V AN +        + A S+ 
Sbjct: 102 AKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLN 161

Query: 67  SEWVLCIDGLVMS-----RSAETINANIITGQIELSAQKIEILSV-----------AEEL 110
            E ++ + G+V       +SA   N  I   +I   ++  E L +           AE  
Sbjct: 162 LESIVLVRGIVKKVDEPIKSATVQNLEIHITKIYTISETPEALPILLEDASRSEAEAEAA 221

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
            LPV          R  YR +DLR  T       +  +    R  +  + F E  TP L 
Sbjct: 222 GLPVVNL-----DTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLL 276

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +  EG       +   +G  Y L Q+PQ  KQ L+ + F+R ++I P FR E+  + R 
Sbjct: 277 GAPSEGGSSVFEVTYF-KGKAY-LAQSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRH 334

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF 264
             EF  LDMEM+F E   ++L+T+  +   +F E 
Sbjct: 335 MTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSEL 369



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H   ++ +     G+S E  +         F  G PPH G   
Sbjct: 470 YDFFMRGEEILSGAQRIHDHALLQERMKAHGLSPE--DPGLKDYCDGFSYGCPPHAGGGI 527

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM  L  KN+R  SLFP
Sbjct: 528 GLERVVMFYLDLKNIRRASLFP 549


>gi|322433972|ref|YP_004216184.1| asparaginyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321161699|gb|ADW67404.1| asparaginyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 444

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 31/285 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWVLCI 73
           G  V L GW++ +R  G ++F   RD  G  Q +  P +A     FE  K++  E  L +
Sbjct: 18  GQSVTLKGWLYNLRASGKLLFPIFRDGTGTIQGIV-PKAAVPEELFETLKTLTLESSLEV 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132
            G V +      +A   +G  EL  + ++++  V +E P P+   +E       ++R L 
Sbjct: 77  TGKVRA------DARAPSG-FELDVEGLKVIQRVPDETPFPI-QLKEAGVDFLMEHRHLW 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R       +  R  I+ +         F+    PILT ++ EG  +       +    Y
Sbjct: 129 IRTPRQSAILRVRATIMRAAAQYFDDNGFVRTDPPILTPNACEGTSELFEMDYFDDDKAY 188

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E++F   DD+L  
Sbjct: 189 -LTQSGQLYIEA-TALALGKVYSFGPTFRAEKSKTRRHLTEFWMVEPELAFATLDDLLVL 246

Query: 253 MENV---------------LRGVFEEFSNGNTVSNNFLRICYDDA 282
            EN                L+ + ++ S   T+   F R+ YDDA
Sbjct: 247 AENYLSFIVAAVLEKHQADLKVIGKDVSKLETIKAPFPRLSYDDA 291


>gi|148828360|ref|YP_001293113.1| lysyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|229559859|sp|A5UIX4|SYK_HAEIG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|148719602|gb|ABR00730.1| lysyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 502

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 127/294 (43%), Gaps = 31/294 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69
           + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W    
Sbjct: 57  LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDEVGTWDLGD 116

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           ++ + G +     +           EL+ +  E+  + + L PLP        + +R++ 
Sbjct: 117 IIGVKGTLFKTKTD-----------ELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQ 165

Query: 129 RFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSR 185
           R+LDL   +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+    
Sbjct: 166 RYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHN 224

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ +
Sbjct: 225 ALDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYAD 282

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
             D+++  E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 283 YHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATVKYGADK 336



 Score = 40.8 bits (94), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|323353881|gb|EGA85734.1| Dps1p [Saccharomyces cerevisiae VL3]
          Length = 557

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 113/275 (41%), Gaps = 31/275 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPDSAC----FEIAKSVR 66
             D    V     VH  R  G  + FL +R    + Q  V AN +        + A S+ 
Sbjct: 102 AKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLN 161

Query: 67  SEWVLCIDGLVMS-----RSAETINANIITGQIELSAQKIEILSV-----------AEEL 110
            E ++ + G+V       +SA   N  I   +I   ++  E L +           AE  
Sbjct: 162 LESIVLVRGIVKKVDEPIKSATVQNLEIHITKIYTISETPEALPILLEDASRSEAEAEAA 221

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
            LPV          R  YR +DLR  T       +  +    R  +  + F E  TP L 
Sbjct: 222 GLPVVNL-----DTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLL 276

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +  EG       +   +G  Y L Q+PQ  KQ L+ + F+R ++I P FR E+  + R 
Sbjct: 277 GAPSEGGSSVFEVTYF-KGKAY-LAQSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRH 334

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF 264
             EF  LDMEM+F E   ++L+T+  +   +F E 
Sbjct: 335 MTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSEL 369



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H   ++ +     G+S E  +         F  G PPH G   
Sbjct: 470 YDFFMRGEEILSGAQRIHDHALLQERMKAHGLSPE--DPGLKDYCDGFSYGCPPHAGGGI 527

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM  L  KN+R  SLFP
Sbjct: 528 GLERVVMFYLDLKNIRRASLFP 549


>gi|282900612|ref|ZP_06308554.1| Asparaginyl-tRNA synthetase, class IIb [Cylindrospermopsis
           raciborskii CS-505]
 gi|281194412|gb|EFA69367.1| Asparaginyl-tRNA synthetase, class IIb [Cylindrospermopsis
           raciborskii CS-505]
          Length = 463

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 125/306 (40%), Gaps = 55/306 (17%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLVMS 79
           + GWV   R   G  FL+I D   +   Q+V N D   ++ I K + +   + + G++++
Sbjct: 21  VQGWVRTKRELKGFTFLEINDGSCLANLQIVINQDLPHYQTIIKQINTGASVEVGGVLVA 80

Query: 80  RSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
              +        GQ IEL A+ +++   A+    P+  +R    S  F      LR  T 
Sbjct: 81  SQGK--------GQRIELKAEAVKVYGDADPETYPLQKKRH---SFEFLRSIAHLRSRTN 129

Query: 139 HKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSRVN 187
               V R R   +       +   F+   TPILTAS  EGA +           +P + N
Sbjct: 130 SFGAVFRVRNACATAIHQFFQQRGFMWVHTPILTASDCEGAGELFSVTSLNLQDIPRKEN 189

Query: 188 QG-----SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           Q       F+  P       QL   +MA  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 190 QDVDYSQDFFGKPTYLTVSGQLEAEIMAMAFTNVYTFGPTFRAENSHTSRHLAEFWMVEP 249

Query: 240 EMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLRIC 278
           EM+F + +  +N  E  L+ +F           EF N            N V+N F R+ 
Sbjct: 250 EMAFCDLEGDMNLAEEFLKHIFRYVMENCEQDMEFFNQRIDNTVLETAENIVNNQFERLS 309

Query: 279 YDDAIR 284
           Y DAI+
Sbjct: 310 YTDAIQ 315


>gi|323308044|gb|EGA61297.1| Dps1p [Saccharomyces cerevisiae FostersO]
          Length = 557

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 113/275 (41%), Gaps = 31/275 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQ--VVANPDSAC----FEIAKSVR 66
             D    V     VH  R  G  + FL +R    + Q  V AN +        + A S+ 
Sbjct: 102 AKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLJQGLVKANKEGTISKNMVKWAGSLN 161

Query: 67  SEWVLCIDGLVMS-----RSAETINANIITGQIELSAQKIEILSV-----------AEEL 110
            E ++ + G+V       +SA   N  I   +I   ++  E L +           AE  
Sbjct: 162 LESIVLVRGIVKKVDEPIKSATVQNLEIHITKIYTISETPEALPILLEDASRSEAEAEAA 221

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
            LPV          R  YR +DLR  T       +  +    R  +  + F E  TP L 
Sbjct: 222 GLPVVNL-----DTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLL 276

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +  EG       +   +G  Y L Q+PQ  KQ L+ + F+R ++I P FR E+  + R 
Sbjct: 277 GAPSEGGSSVFEVTYF-KGKAY-LAQSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRH 334

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF 264
             EF  LDMEM+F E   ++L+T+  +   +F E 
Sbjct: 335 MTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSEL 369



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H   ++ +     G+S E  +         F  G PPH G   
Sbjct: 470 YDFFMRGEEILSGAQRIHDHALLQERMKAHGLSPE--DPGLKDYCDGFSYGCPPHAGGGI 527

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM  L  KN+R  SLFP
Sbjct: 528 GLERVVMFYLDLKNIRRASLFP 549


>gi|227544676|ref|ZP_03974725.1| lysine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300909082|ref|ZP_07126545.1| lysine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185322|gb|EEI65393.1| lysine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300894489|gb|EFK87847.1| lysine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 508

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 32/288 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWV 70
           ++++G+ V ++G + R R  G   F D  D  G  QV A  D      + + K       
Sbjct: 51  LNEMGAKVIIAGRMTRKRSSGKAGFADFVDRTGKIQVYARKDMVGDEPYHVFKRSDIGDF 110

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L I+G V+            TG++ + A KI  LS A   PLP  +     PE+I ++ R
Sbjct: 111 LGIEGDVIKTD---------TGELTVRAHKITFLSKALR-PLPNKWDGVTDPETI-YRQR 159

Query: 130 FLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187
           +LDL  +    K   +RT II ++R  M    F E  TPIL T +    AR F+      
Sbjct: 160 YLDLISNPESFKRFHQRTAIIKAVRKYMDDNGFTEVETPILNTQAGGANARPFITHHNAL 219

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVE 245
               Y L  A + Y + L+  GF+R +++   FR+E  DP  +    EF  ++   ++ +
Sbjct: 220 DIDMY-LRIATELYLKRLIVGGFERVYELGRIFRNEGMDPHHN---PEFTTMETYAAYFD 275

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIR 284
             D+++  E +++   +  S+   ++          NF RI   DA++
Sbjct: 276 FQDVMDETEGIVKAAAKVVSDDGKITYQGHEIDLGGNFKRITMVDAVK 323



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 29/37 (78%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + GMPP GG+  GIDR+VMLL  AK++R+V LFP
Sbjct: 452 QALEYGMPPTGGLGIGIDRLVMLLTDAKSIRDVILFP 488


>gi|187779156|ref|ZP_02995629.1| hypothetical protein CLOSPO_02751 [Clostridium sporogenes ATCC
           15579]
 gi|187772781|gb|EDU36583.1| hypothetical protein CLOSPO_02751 [Clostridium sporogenes ATCC
           15579]
          Length = 506

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 20/253 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVMS 79
           L+G V  +R  G   F +I D  G  Q+  +     +  +EI K +    ++ ++G V  
Sbjct: 68  LAGRVMLIRRMGNATFANIIDEKGNIQIFLSKKLIGAKSYEILKLIDVGDIIGVNGAVFK 127

Query: 80  RSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
                      TG+I +   + E+LS +   LP    G ++    +R ++R LD+   + 
Sbjct: 128 TQ---------TGEITIRVNQFELLSKSIRTLPEKYHGIQD--ADLRQRHRSLDMIMNEG 176

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQ 196
           + +  +KR++ I ++R  +   NFIE  TPIL      G A+ F         + Y +  
Sbjct: 177 VKERFIKRSKAITAIREYLNNLNFIEADTPILDTKYGGGEAKPFTTFVNALDCNVY-MNV 235

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+ Y + L+  G +R +  A  FR+E       P EF   +  MS+ + +D++  MEN+
Sbjct: 236 SPELYLKRLIVGGIERVYTFARAFRNEGIDRTHYP-EFSLFECYMSYADYNDMMKLMENI 294

Query: 257 LRGVFEEFSNGNT 269
              VF +  NG T
Sbjct: 295 YEYVFNKV-NGTT 306



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A    MPP GG+  GIDR++M L G+  +++V  FP+
Sbjct: 467 AIDTAMPPTGGLGMGIDRMIMFLTGSYAIKDVIAFPL 503


>gi|291541637|emb|CBL14747.1| Lysyl-tRNA synthetase (class II) [Ruminococcus bromii L2-63]
          Length = 637

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 135/285 (47%), Gaps = 40/285 (14%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGLVM 78
           ++G +   R  G + F+D+ D  G  Q+ A  D    E    ++ +W    ++ + G V 
Sbjct: 60  VAGRLLSKRGKGKVSFMDLWDRSGKIQIFAKFDDLGEEEYGFLK-KWDIGDIVEVKGFVF 118

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-T 137
                        G+I + A+++++LS + + PLP          +R++ R++DL  +  
Sbjct: 119 KTQ---------MGEISVHAKEVKLLSKSLK-PLPEKYHGLTNTDLRYRQRYVDLIMNPE 168

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYALPQ 196
           +    VKR++II S+R  +  + F+E  TP+L A++    AR FL         F AL +
Sbjct: 169 VKDTFVKRSKIIGSIRRYLDNQGFMEVETPMLVANAGGASARPFLT-------HFNALDE 221

Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                 + + Y + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + + ++
Sbjct: 222 DLKLRISLELYLKRLIVGGLEKVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYNGMM 280

Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           +  EN+ R V +E     T++ N         F RI   DA+++Y
Sbjct: 281 DLTENLYRHVAQEVLGTTTITYNGIEMDLGKPFERITMLDAVKKY 325



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 27/41 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+ MLL  +  +R+V LFP  ++ 
Sbjct: 452 ALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFPTMKSL 492


>gi|282854731|ref|ZP_06264066.1| lysine--tRNA ligase [Propionibacterium acnes J139]
 gi|282582313|gb|EFB87695.1| lysine--tRNA ligase [Propionibacterium acnes J139]
          Length = 1109

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   DS   +  +  R
Sbjct: 654 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDSMGVDSLRDFR 713

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 714 HT-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 767

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 768 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 827

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 828 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 885

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 886 DYVQMRHLTREMILSAARNATGGT 909



 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1068 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1103


>gi|258646083|ref|ZP_05733552.1| lysine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260403458|gb|EEW97005.1| lysine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 631

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 139/320 (43%), Gaps = 29/320 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74
           G  V+++G +  +R HG   F  +RD  G  Q+    D+     + + K V    +L ++
Sbjct: 51  GEHVKVAGRIMIIRGHGKTAFCTLRDEKGDIQLYFRKDTVSENEWNLFKLVDMGDILGVE 110

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V +           TG+  +      +LS +   PLP        +  R++ R+LDL 
Sbjct: 111 GTVFTTH---------TGETTIRVLHFTMLSKSLR-PLPEKWHGLTDKEQRYRQRYLDLI 160

Query: 135 RD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +  + K  +KR  ++ ++R    A  F+E  TP+L        AR F+        + Y
Sbjct: 161 ANPDVRKTFIKRANMLQAIRNWYTAHGFLEVETPVLQPLYGGANARPFMTHFNALDMTMY 220

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  G++R F+I   FR+E   +   P EF  ++   ++ + DD+++ 
Sbjct: 221 -LRIAPELYLKRLLVGGYERIFEITRNFRNEGMDTRHNP-EFTAIETYQAYGDIDDVIDQ 278

Query: 253 MENVLRGV------FEEFSNGNT---VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            E ++           +F+   T   V+  + R+   +A+++Y  +  D    I      
Sbjct: 279 TEQIVAACAMASYGTTKFTYEGTEIDVAGPWPRLTMAEAVKKYTGEDFDACKTIEEARAI 338

Query: 304 ---EHFVHSEFRVFSKILSV 320
               H  + EF  F K+L+ 
Sbjct: 339 CDRLHVEYGEFDGFGKLLAA 358



 Score = 45.1 bits (105), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+ ML+  + ++R+V LFP
Sbjct: 448 ALEYGMPPTGGLGIGLDRLFMLMTNSSSIRDVLLFP 483


>gi|320100934|ref|YP_004176526.1| asparaginyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753286|gb|ADV65044.1| asparaginyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 432

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 113/251 (45%), Gaps = 15/251 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G+ V + GW++R    GG  F+ +RD  G+ QVV +      E+   +++   + ++  
Sbjct: 15  IGAHVCIRGWIYRRSVVGGKAFIRVRDSSGVIQVVVDSGRLGEELVNELKN---IGLEAS 71

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           VM+            G  EL A+  +I   + + P+      EY        R L +R  
Sbjct: 72  VMA-CGTVREEPRAPGGYELEAESFKITGYSRDFPIKGGEGLEY----LLDNRHLWIRSP 126

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
              K +  +  ++ + R    +  + E + PILTAS+ EG           Q ++  L Q
Sbjct: 127 RFAKILKVKHTVLEAGREYFTSNGWWEVNPPILTASACEGGATLFPVDYFGQKAY--LSQ 184

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME-- 254
           + Q Y + L+    ++ + + P FR E  R+ R   E++ L+ E ++   +D++   E  
Sbjct: 185 SAQLYLEALIYV-LEKVWSLTPSFRAERSRTRRHLAEYWHLEPEAAWYTMEDMMRVAEEL 243

Query: 255 --NVLRGVFEE 263
             +++R V EE
Sbjct: 244 VSHIVRRVLEE 254


>gi|254037141|ref|ZP_04871218.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|226840247|gb|EEH72249.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
          Length = 514

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 77  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 133

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 134 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 190

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 191 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 248

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 249 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 307

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 308 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 356



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 473 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 508


>gi|303284531|ref|XP_003061556.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456886|gb|EEH54186.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 448

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 16/264 (6%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK---SVRSE 68
           +  + V   V L G VH VR  G   FL +R          +       + K    + +E
Sbjct: 1   MTAARVNETVTLRGRVHNVRGKGKSAFLILRQQTATCVFFVDDVDVSKGMVKWVSKLEAE 60

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIR 125
            V+ I G+V   S   +  +    ++EL    +  +S +      P   F + +  + +R
Sbjct: 61  SVIDISGVVAVPSEGPV-VSCTQKEVELVVHSVYCVSRSIDDASRPESDFDKEDGAQYVR 119

Query: 126 ------FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                   YR +DLR          ++ +    R  +  ++F+E  TP L   + EG   
Sbjct: 120 VLQDTRLNYRVIDLRTPANQAIFRVQSAVCELFREALRRKDFVEIHTPKLIGGASEGGAS 179

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                 + Q +   L Q+PQ YKQ+ + +  DR F+I P FR E+  + R   EF  LDM
Sbjct: 180 VFKLDYMGQPA--CLAQSPQLYKQMAIEADMDRVFEIGPVFRAENSNTHRHLCEFTGLDM 237

Query: 240 EMSFVEQ-DDILNTMENVLRGVFE 262
           EM+  E   ++L+ + ++   +F+
Sbjct: 238 EMTIKEHYSEVLDVLNDLFLHMFD 261



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H  E++ +     GI  E ++        AF+ G  PHGG   
Sbjct: 363 FDIFIRGEEIISGAQRIHDVELLSKRAVECGIEIETIQ----AYIDAFKYGALPHGGCGV 418

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML L   N+R+ S+FP
Sbjct: 419 GLERVVMLFLNLGNIRKTSMFP 440


>gi|331665797|ref|ZP_08366691.1| lysine--tRNA ligase [Escherichia coli TA143]
 gi|331056848|gb|EGI28842.1| lysine--tRNA ligase [Escherichia coli TA143]
          Length = 505

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|195426483|ref|XP_002061362.1| GK20765 [Drosophila willistoni]
 gi|194157447|gb|EDW72348.1| GK20765 [Drosophila willistoni]
          Length = 534

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 35/268 (13%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V + G VH  R  G   FL +R      Q        C      + S+ ++   G +  
Sbjct: 91  LVWVRGRVHTSRAKGKQCFLILRQQSSTIQ--------CILAVNDIISKQMVKFTGNIPK 142

Query: 80  RSAETINANIIT----------GQIELSAQKIEILSVAE-ELPLPV--FGEREYP----- 121
            S   I A  ++            +EL  +++ ++S A+ +LPL +      E P     
Sbjct: 143 ESIIDIQAKPVSVPNKIESCTEQTVELCVEQVFVISQAKPQLPLQIEDASRPENPDDAEG 202

Query: 122 ------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                 +  R   R LDLR             +    R  +  + F E  TP + +++ E
Sbjct: 203 LNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPKIISAASE 262

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           G  +    S     ++ A  Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R   EF 
Sbjct: 263 GGANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFV 320

Query: 236 QLDMEMSF-VEQDDILNTMENVLRGVFE 262
            LD+EM+F     ++L+T+ N    +F+
Sbjct: 321 GLDLEMAFKYHYHEVLHTIGNTFTAIFK 348



 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++   + GI       +      +F+ G PPH G   
Sbjct: 449 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDT----TKIAAYIESFRYGCPPHAGGGI 504

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 505 GMERVVMLYLGLDNIRKTSMFP 526


>gi|217032013|ref|ZP_03437514.1| hypothetical protein HPB128_187g40 [Helicobacter pylori B128]
 gi|216946323|gb|EEC24929.1| hypothetical protein HPB128_187g40 [Helicobacter pylori B128]
          Length = 76

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/74 (43%), Positives = 49/74 (66%)

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
           ++ +FG L  A + G PPHGG A G DR++ML+  + ++R+V  FP +Q    LL  +PS
Sbjct: 1   MQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSHSIRDVIAFPKTQKASCLLTDAPS 60

Query: 578 TVSVEQLRELGLRI 591
            ++ EQLREL +R+
Sbjct: 61  PINEEQLRELHIRL 74


>gi|218702794|ref|YP_002410423.1| lysyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218372780|emb|CAR20658.1| lysine tRNA synthetase, inducible [Escherichia coli IAI39]
          Length = 505

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|332280912|ref|ZP_08393325.1| lysyl-tRNA synthetase [Shigella sp. D9]
 gi|332103264|gb|EGJ06610.1| lysyl-tRNA synthetase [Shigella sp. D9]
          Length = 514

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 77  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 133

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 134 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 190

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 191 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 248

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 249 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 307

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 308 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 356



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 473 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 508


>gi|312965748|ref|ZP_07779977.1| lysyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312289722|gb|EFR17613.1| lysyl-tRNA synthetase [Escherichia coli 2362-75]
          Length = 505

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|117626414|ref|YP_859737.1| lysyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|161486020|ref|NP_756986.2| lysyl-tRNA synthetase [Escherichia coli CFT073]
 gi|162138308|ref|YP_543665.2| lysyl-tRNA synthetase [Escherichia coli UTI89]
 gi|218561217|ref|YP_002394130.1| lysyl-tRNA synthetase [Escherichia coli S88]
 gi|218707745|ref|YP_002415264.1| lysyl-tRNA synthetase [Escherichia coli UMN026]
 gi|227886830|ref|ZP_04004635.1| lysine--tRNA ligase [Escherichia coli 83972]
 gi|293402762|ref|ZP_06646859.1| lysS [Escherichia coli FVEC1412]
 gi|293407855|ref|ZP_06651695.1| lysyl-tRNA synthetase [Escherichia coli B354]
 gi|298378291|ref|ZP_06988175.1| lysS [Escherichia coli FVEC1302]
 gi|300897550|ref|ZP_07115962.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300940610|ref|ZP_07155175.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300988376|ref|ZP_07178640.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301021726|ref|ZP_07185698.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|301047649|ref|ZP_07194712.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|331650168|ref|ZP_08351241.1| lysine--tRNA ligase [Escherichia coli M605]
 gi|331660708|ref|ZP_08361640.1| lysine--tRNA ligase [Escherichia coli TA206]
 gi|39932415|sp|Q8FAT5|SYK2_ECOL6 RecName: Full=Lysyl-tRNA synthetase, heat inducible; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|115515538|gb|ABJ03613.1| lysyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|218367986|emb|CAR05786.1| lysine tRNA synthetase, inducible [Escherichia coli S88]
 gi|218434842|emb|CAR15778.1| lysine tRNA synthetase, inducible [Escherichia coli UMN026]
 gi|227836172|gb|EEJ46638.1| lysine--tRNA ligase [Escherichia coli 83972]
 gi|281181228|dbj|BAI57558.1| lysyl-tRNA synthetase [Escherichia coli SE15]
 gi|284924217|emb|CBG37317.1| lysyl-tRNA synthetase [Escherichia coli 042]
 gi|291429677|gb|EFF02691.1| lysS [Escherichia coli FVEC1412]
 gi|291472106|gb|EFF14588.1| lysyl-tRNA synthetase [Escherichia coli B354]
 gi|294491540|gb|ADE90296.1| lysyl-tRNA synthetase LysU [Escherichia coli IHE3034]
 gi|298280625|gb|EFI22126.1| lysS [Escherichia coli FVEC1302]
 gi|300300455|gb|EFJ56840.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300358698|gb|EFJ74568.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300397909|gb|EFJ81447.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300407476|gb|EFJ91014.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300454610|gb|EFK18103.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|307556300|gb|ADN49075.1| lysyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|307629201|gb|ADN73505.1| lysyl-tRNA synthetase [Escherichia coli UM146]
 gi|315287968|gb|EFU47370.1| lysyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315294016|gb|EFU53368.1| lysyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315296081|gb|EFU55390.1| lysyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|320193511|gb|EFW68148.1| lysyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|323189988|gb|EFZ75266.1| lysyl-tRNA synthetase [Escherichia coli RN587/1]
 gi|323950305|gb|EGB46186.1| lysyl-tRNA synthetase [Escherichia coli H252]
 gi|323954384|gb|EGB50168.1| lysyl-tRNA synthetase [Escherichia coli H263]
 gi|323965518|gb|EGB60972.1| lysyl-tRNA synthetase [Escherichia coli M863]
 gi|323975529|gb|EGB70630.1| lysyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324008622|gb|EGB77841.1| lysyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|327250072|gb|EGE61791.1| lysyl-tRNA synthetase [Escherichia coli STEC_7v]
 gi|330908475|gb|EGH36994.1| lysyl-tRNA synthetase (class 2) [Escherichia coli AA86]
 gi|331041113|gb|EGI13270.1| lysine--tRNA ligase [Escherichia coli M605]
 gi|331051750|gb|EGI23789.1| lysine--tRNA ligase [Escherichia coli TA206]
          Length = 505

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|157158511|ref|YP_001465628.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
 gi|170021873|ref|YP_001726827.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|300924404|ref|ZP_07140378.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|301330484|ref|ZP_07223100.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|312974064|ref|ZP_07788235.1| lysyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|157080541|gb|ABV20249.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
 gi|169756801|gb|ACA79500.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|300419399|gb|EFK02710.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300843567|gb|EFK71327.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|310331598|gb|EFP98854.1| lysyl-tRNA synthetase [Escherichia coli 1827-70]
          Length = 505

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|237703720|ref|ZP_04534201.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|26111378|gb|AAN83560.1|AE016771_71 Lysyl-tRNA synthetase, heat inducible [Escherichia coli CFT073]
 gi|91075253|gb|ABE10134.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli UTI89]
 gi|226901632|gb|EEH87891.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
          Length = 514

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 77  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 133

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 134 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 190

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 191 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 248

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 249 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 307

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 308 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 356



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 473 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 508


>gi|256019775|ref|ZP_05433640.1| lysyl-tRNA synthetase [Shigella sp. D9]
          Length = 505

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|240146778|ref|ZP_04745379.1| aspartate--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257201063|gb|EEU99347.1| aspartate--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 443

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 119/265 (44%), Gaps = 28/265 (10%)

Query: 1   MHRYRTHSCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           +++  T   GDL   S  G  V+++G VH +R  G + F+ +R   G+ Q V       F
Sbjct: 7   VNKKETLEIGDLLTGSYEGKSVKVNGAVHTIRDMGEVAFIVLRKREGLLQCVYEEGKTQF 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGER 118
           ++ K ++    + ++G V                 E+   KI++LS  A  +PL +  + 
Sbjct: 67  DL-KDLKEAATIEVEGTVKPEERAPHG-------FEIRLDKIKVLSEPAAPMPLAI-SKW 117

Query: 119 EYPESIR--FKYRFLDLRRDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILT 170
           +   S+      R + LR      NI +R +      ++   R  + ++ F E  TP + 
Sbjct: 118 KLNTSLEANLNNRAIALR------NIRERAKFRIQEGVVRGFRDFLYSQGFTEIHTPKIG 171

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           A S EG  +       ++ +   L Q+PQ YKQ+ M   FDR F+ AP FR E   + R 
Sbjct: 172 AKSAEGGANLFRLEYFHRPA--VLQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRH 228

Query: 231 PGEFYQLDMEMSFVEQDDILNTMEN 255
             E+  LD EM +++  + +  ME 
Sbjct: 229 LNEYTSLDFEMGYIDGFEDIMAMET 253



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EI +GG R H    +++     G+  E +E         F+ GMPPHGG
Sbjct: 355 TLSFDLLYQGLEITTGGQRIHDYNKLMEKIEKRGMESEGMEQYLS----VFKHGMPPHGG 410

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M L+G  NVRE +LFP
Sbjct: 411 LGIGLERLTMKLVGEDNVRETTLFP 435


>gi|15804722|ref|NP_290763.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15834365|ref|NP_313138.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|16131955|ref|NP_418553.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
           substr. MG1655]
 gi|89110851|ref|AP_004631.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
           substr. W3110]
 gi|157163595|ref|YP_001460913.1| lysyl-tRNA synthetase [Escherichia coli HS]
 gi|168748011|ref|ZP_02773033.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4113]
 gi|168755314|ref|ZP_02780321.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4401]
 gi|168760993|ref|ZP_02786000.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4501]
 gi|168766403|ref|ZP_02791410.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4486]
 gi|168774502|ref|ZP_02799509.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4196]
 gi|168780556|ref|ZP_02805563.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4076]
 gi|168784761|ref|ZP_02809768.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC869]
 gi|168798195|ref|ZP_02823202.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC508]
 gi|170083579|ref|YP_001732899.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
           substr. DH10B]
 gi|188493779|ref|ZP_03001049.1| lysyl-tRNA synthetase LysU [Escherichia coli 53638]
 gi|193063048|ref|ZP_03044140.1| lysyl-tRNA synthetase LysU [Escherichia coli E22]
 gi|194426817|ref|ZP_03059370.1| lysyl-tRNA synthetase LysU [Escherichia coli B171]
 gi|195935919|ref|ZP_03081301.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208807103|ref|ZP_03249440.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4206]
 gi|208813962|ref|ZP_03255291.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4045]
 gi|208819932|ref|ZP_03260252.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4042]
 gi|209400647|ref|YP_002273676.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4115]
 gi|209921620|ref|YP_002295704.1| lysyl-tRNA synthetase [Escherichia coli SE11]
 gi|217326188|ref|ZP_03442272.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. TW14588]
 gi|218556682|ref|YP_002389596.1| lysyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218697832|ref|YP_002405499.1| lysyl-tRNA synthetase [Escherichia coli 55989]
 gi|238903238|ref|YP_002929034.1| lysine tRNA synthetase, inducible [Escherichia coli BW2952]
 gi|254796152|ref|YP_003080989.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|260846924|ref|YP_003224702.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O103:H2
           str. 12009]
 gi|260858233|ref|YP_003232124.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O26:H11
           str. 11368]
 gi|261225251|ref|ZP_05939532.1| lysine tRNA synthetase, inducible [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255497|ref|ZP_05948030.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O157:H7
           str. FRIK966]
 gi|291285546|ref|YP_003502364.1| Lysyl-tRNA synthetase, heat inducible [Escherichia coli O55:H7 str.
           CB9615]
 gi|293417636|ref|ZP_06660258.1| lysyl-tRNA synthetase [Escherichia coli B185]
 gi|293476442|ref|ZP_06664850.1| lysyl-tRNA synthetase [Escherichia coli B088]
 gi|300818053|ref|ZP_07098266.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300821220|ref|ZP_07101368.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300906460|ref|ZP_07124156.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300920874|ref|ZP_07137270.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300947711|ref|ZP_07161878.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300954178|ref|ZP_07166643.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|301027934|ref|ZP_07191223.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301306056|ref|ZP_07212135.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301644736|ref|ZP_07244713.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|307140823|ref|ZP_07500179.1| lysyl-tRNA synthetase [Escherichia coli H736]
 gi|307312033|ref|ZP_07591670.1| lysyl-tRNA synthetase [Escherichia coli W]
 gi|331644878|ref|ZP_08345995.1| lysine--tRNA ligase [Escherichia coli H736]
 gi|331670994|ref|ZP_08371828.1| lysine--tRNA ligase [Escherichia coli TA271]
 gi|331680261|ref|ZP_08380920.1| lysine--tRNA ligase [Escherichia coli H591]
 gi|67473144|sp|P0A8N5|SYK2_ECOLI RecName: Full=Lysyl-tRNA synthetase, heat inducible; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|67473145|sp|P0A8N6|SYK2_ECO57 RecName: Full=Lysyl-tRNA synthetase, heat inducible; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|12519106|gb|AAG59329.1|AE005646_8 lysine tRNA synthetase, inducible; heat shock protein [Escherichia
           coli O157:H7 str. EDL933]
 gi|398703|emb|CAA34542.1| unnamed protein product [Escherichia coli]
 gi|536974|gb|AAA97029.1| lysyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|1790571|gb|AAC77090.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
           substr. MG1655]
 gi|13364588|dbj|BAB38534.1| lysine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|85676882|dbj|BAE78132.1| lysine tRNA synthetase, inducible [Escherichia coli str. K12
           substr. W3110]
 gi|157069275|gb|ABV08530.1| lysyl-tRNA synthetase [Escherichia coli HS]
 gi|169891414|gb|ACB05121.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
           substr. DH10B]
 gi|187769884|gb|EDU33728.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4196]
 gi|188017408|gb|EDU55530.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4113]
 gi|188488978|gb|EDU64081.1| lysyl-tRNA synthetase LysU [Escherichia coli 53638]
 gi|189001831|gb|EDU70817.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4076]
 gi|189357458|gb|EDU75877.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4401]
 gi|189364021|gb|EDU82440.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4486]
 gi|189368520|gb|EDU86936.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4501]
 gi|189375037|gb|EDU93453.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC869]
 gi|189379164|gb|EDU97580.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC508]
 gi|192931307|gb|EDV83909.1| lysyl-tRNA synthetase LysU [Escherichia coli E22]
 gi|194415153|gb|EDX31422.1| lysyl-tRNA synthetase LysU [Escherichia coli B171]
 gi|208726904|gb|EDZ76505.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4206]
 gi|208735239|gb|EDZ83926.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4045]
 gi|208740055|gb|EDZ87737.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4042]
 gi|209162047|gb|ACI39480.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4115]
 gi|209750618|gb|ACI73616.1| lysine tRNA synthetase [Escherichia coli]
 gi|209750620|gb|ACI73617.1| lysine tRNA synthetase [Escherichia coli]
 gi|209750622|gb|ACI73618.1| lysine tRNA synthetase [Escherichia coli]
 gi|209750624|gb|ACI73619.1| lysine tRNA synthetase [Escherichia coli]
 gi|209750626|gb|ACI73620.1| lysine tRNA synthetase [Escherichia coli]
 gi|209914879|dbj|BAG79953.1| lysyl-tRNA synthase [Escherichia coli SE11]
 gi|217322409|gb|EEC30833.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. TW14588]
 gi|218354564|emb|CAV01470.1| lysine tRNA synthetase, inducible [Escherichia coli 55989]
 gi|218363451|emb|CAR01105.1| lysine tRNA synthetase, inducible [Escherichia coli IAI1]
 gi|238861695|gb|ACR63693.1| lysine tRNA synthetase, inducible [Escherichia coli BW2952]
 gi|254595552|gb|ACT74913.1| lysine tRNA synthetase, inducible [Escherichia coli O157:H7 str.
           TW14359]
 gi|257756882|dbj|BAI28384.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O26:H11
           str. 11368]
 gi|257762071|dbj|BAI33568.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O103:H2
           str. 12009]
 gi|260451041|gb|ACX41463.1| lysyl-tRNA synthetase [Escherichia coli DH1]
 gi|290765419|gb|ADD59380.1| Lysyl-tRNA synthetase, heat inducible [Escherichia coli O55:H7 str.
           CB9615]
 gi|291320895|gb|EFE60337.1| lysyl-tRNA synthetase [Escherichia coli B088]
 gi|291430354|gb|EFF03352.1| lysyl-tRNA synthetase [Escherichia coli B185]
 gi|299878984|gb|EFI87195.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300318762|gb|EFJ68546.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300401741|gb|EFJ85279.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300412180|gb|EFJ95490.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300452701|gb|EFK16321.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300526109|gb|EFK47178.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300529463|gb|EFK50525.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300838698|gb|EFK66458.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301076963|gb|EFK91769.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|306907840|gb|EFN38341.1| lysyl-tRNA synthetase [Escherichia coli W]
 gi|309704599|emb|CBJ03949.1| lysyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|315063447|gb|ADT77774.1| lysine tRNA synthetase, inducible [Escherichia coli W]
 gi|315138686|dbj|BAJ45845.1| lysyl-tRNA synthetase [Escherichia coli DH1]
 gi|315253814|gb|EFU33782.1| lysyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|320190736|gb|EFW65386.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320638889|gb|EFX08535.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320644258|gb|EFX13323.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320649576|gb|EFX18100.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320654972|gb|EFX22933.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320660479|gb|EFX27940.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320665749|gb|EFX32786.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|323162115|gb|EFZ47984.1| lysyl-tRNA synthetase [Escherichia coli E128010]
 gi|323182237|gb|EFZ67647.1| lysyl-tRNA synthetase [Escherichia coli 1357]
 gi|323380483|gb|ADX52751.1| lysyl-tRNA synthetase [Escherichia coli KO11]
 gi|323935444|gb|EGB31782.1| lysyl-tRNA synthetase [Escherichia coli E1520]
 gi|323940049|gb|EGB36243.1| lysyl-tRNA synthetase [Escherichia coli E482]
 gi|323946124|gb|EGB42159.1| lysyl-tRNA synthetase [Escherichia coli H120]
 gi|324017207|gb|EGB86426.1| lysyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|324118698|gb|EGC12590.1| lysyl-tRNA synthetase [Escherichia coli E1167]
 gi|326341816|gb|EGD65599.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|326346608|gb|EGD70342.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|331035853|gb|EGI08091.1| lysine--tRNA ligase [Escherichia coli H736]
 gi|331061908|gb|EGI33833.1| lysine--tRNA ligase [Escherichia coli TA271]
 gi|331071724|gb|EGI43060.1| lysine--tRNA ligase [Escherichia coli H591]
          Length = 505

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|282898480|ref|ZP_06306470.1| Asparaginyl-tRNA synthetase, class IIb [Raphidiopsis brookii D9]
 gi|281196646|gb|EFA71552.1| Asparaginyl-tRNA synthetase, class IIb [Raphidiopsis brookii D9]
          Length = 463

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 126/306 (41%), Gaps = 55/306 (17%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLVMS 79
           + GWV   R   G  FL+I D   +   Q+V N D   ++ I K + +   + + G++++
Sbjct: 21  VRGWVRTKRELKGFTFLEINDGSCLANLQIVINQDLPQYQTIIKQINTGASVEVGGVLVA 80

Query: 80  RSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
              +        GQ IEL A+ +++   A+    P+  +R    S  F      LR  T 
Sbjct: 81  SQGK--------GQRIELKAEGVKVYGDADPETYPLQKKRH---SFEFLRSIAHLRSRTN 129

Query: 139 HKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVN 187
               V R R     ++        F+   TPILTAS  EGA +           +P + N
Sbjct: 130 SFGAVFRVRNACATAIHQFFQQRGFMWVHTPILTASDCEGAGELFSVTSLNLKDIPRKEN 189

Query: 188 Q-----GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           Q       F+  P       QL   +MA  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 190 QEVDYSQDFFGKPTYLTVSGQLEAEIMAMAFTNVYTFGPTFRAENSHTSRHLAEFWMVEP 249

Query: 240 EMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRIC 278
           EM+F + +  +N  E+ L+ +F           EF N            N V+N F R+ 
Sbjct: 250 EMAFCDLEGDMNLAEDFLKHIFRYVMENCEQDMEFFNERIDNTVLETAENIVNNQFERLT 309

Query: 279 YDDAIR 284
           Y DAI+
Sbjct: 310 YTDAIQ 315


>gi|170017769|ref|YP_001728688.1| lysyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|238688932|sp|B1MVJ0|SYK_LEUCK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|169804626|gb|ACA83244.1| Lysyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 493

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 27/265 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCIDGLVM 78
           V ++G +   R  G +IF D RD  G  QV A  D     + I K       L I G++M
Sbjct: 62  VVIAGRMIAKRGAGKVIFADFRDVSGKIQVYAKRDDLGENYPIIKRADLGDFLGIKGIIM 121

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
              A         G++ + A ++  L+ A   P+P           R++ R+LDL   + 
Sbjct: 122 KTEA---------GELTVLATELTHLTKALR-PMPDKFHGIADVETRYRKRYLDLIANEE 171

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
             K    R++II+++R  M +++F+E  TPIL T +    AR F+          Y +  
Sbjct: 172 SFKKFQLRSKIISAIRAYMDSQDFMEVETPILQTEAGGAAARPFITHHNALNIDMY-MRI 230

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           A + Y + L+  GF+R ++I   FR+E  DP+ +    EF  ++   ++++  D+++  E
Sbjct: 231 ATELYLKRLVVGGFERVYEIGRIFRNEGMDPKHN---PEFTTMETYAAYMDFTDVMDETE 287

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICY 279
            +       F    +V ++ L++ Y
Sbjct: 288 GI-------FKAAASVVSDDLKVTY 305



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  +  +R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSDTIRDVLLFP 490


>gi|170682016|ref|YP_001746526.1| lysyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|170519734|gb|ACB17912.1| lysyl-tRNA synthetase LysU [Escherichia coli SMS-3-5]
          Length = 505

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|119595468|gb|EAW75062.1| asparaginyl-tRNA synthetase 2 (mitochondrial)(putative), isoform
           CRA_b [Homo sapiens]
          Length = 469

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 34/256 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVRSEWVLCI 73
           G  +++ GW+  VR    ++FL + D   +   QVVA+   DS       SV       +
Sbjct: 41  GERIKIQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGLDSRELTFGSSVE------V 94

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++   ++  N       +EL A+KI+   +  +   P+   R+YP            
Sbjct: 95  QGQLIKSPSKRQN-------VELKAEKIKDFPIKYKERHPLEYLRQYPH--------FRC 139

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS---RVNQ 188
           R + L   +  R+    ++        F+   TPI+T++  EGA +   L PS   +V +
Sbjct: 140 RTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLKVPE 199

Query: 189 GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            +F+ +P       QL   +M+  F + F   P FR E+ +S R   EFY ++ E+SFV+
Sbjct: 200 ENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVD 259

Query: 246 Q-DDILNTMENVLRGV 260
              D++  +E + +  
Sbjct: 260 SLQDLMQVIEELFKAT 275



 Score = 37.4 bits (85), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  GG+R      + +  +  G++ EV +      RFG +         PH
Sbjct: 385 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 434

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG   G +R +  +LG  N+++V  FP   + C L
Sbjct: 435 GGFGMGFERYLQCILGVDNIKDVIPFPRFPHSCLL 469


>gi|323156681|gb|EFZ42822.1| lysyl-tRNA synthetase [Escherichia coli EPECa14]
          Length = 403

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347


>gi|291528245|emb|CBK93831.1| aspartyl-tRNA synthetase, archaeal type [Eubacterium rectale
           M104/1]
          Length = 443

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 117/282 (41%), Gaps = 24/282 (8%)

Query: 11  DLGVSDV------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           DLG++++      G  +++ G +H +R  G + F+ +R   G+ Q V  P  + F +   
Sbjct: 12  DLGIAEILAGDYEGKNIKVKGAIHTIRDMGEVAFIVLRRRDGLIQCVYEPGKSRFSVDDL 71

Query: 65  VRSEWV-LCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPE 122
             ++ V +C       RS             EL    I ILS  AE +PL +  + +   
Sbjct: 72  KEADTVEVCGTYKSDDRSP---------NGFELRLDTITILSEPAEPMPLQI-NKWKLNT 121

Query: 123 SIRFKY--RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           S+  K   R + LR          +  I    R  +    F E  TP L A S EG  + 
Sbjct: 122 SLEAKLNNRAVALRNPRERATFRIQEGITRGFRDFLYNNGFTEIHTPKLGAKSAEGGANL 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 ++ +   L Q+PQ YKQ+ M   FDR F+ AP FR E   + R   E+  LD E
Sbjct: 182 FKLEYFHRPAI--LQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFE 238

Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
           M +++  +DI+      L+   E            L+I   D
Sbjct: 239 MGYIDGFEDIMEMETGFLQYTMELLKTSYAKELELLKIKLPD 280



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EI +GG R H    +++  +  G+  E +E+       AF+ GMPPHGG
Sbjct: 355 TLSFDLLFRGLEITTGGQRIHDYNKLMEKIAKRGMETEGMESYLS----AFKYGMPPHGG 410

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M L+G  NVRE +LFP
Sbjct: 411 LGIGLERLTMQLIGEDNVREATLFP 435


>gi|291618680|ref|YP_003521422.1| LysS [Pantoea ananatis LMG 20103]
 gi|291153710|gb|ADD78294.1| LysS [Pantoea ananatis LMG 20103]
 gi|327395060|dbj|BAK12482.1| lysyl-tRNA synthetase LysS [Pantoea ananatis AJ13355]
          Length = 506

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 133/294 (45%), Gaps = 23/294 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + D+G  V ++G +   R  G   F+ ++D  G  Q+    D     I      +W L  
Sbjct: 61  LEDLGIEVSVAGRMMTRRIMGKASFITLQDVGGRIQLYVARDDLAEGIYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
             +   +N  K R++I+  +R  M+  +F+E  TP++    P GA  R F+         
Sbjct: 175 IANDESRNTFKIRSQIMAGIRQFMVGRDFMEVETPMMQVI-PGGASARPFITHHNALDID 233

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  +++ M++ +  D++
Sbjct: 234 MY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYKDLI 291

Query: 251 NTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDL 293
              E++ R + ++      V            F ++   +AI++Y   TD  DL
Sbjct: 292 ELTESLFRTLAQDILGSTVVPYGEQEFDFGKPFEKLTMREAIKKYRPETDLADL 345



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|110644488|ref|YP_672218.1| lysyl-tRNA synthetase [Escherichia coli 536]
 gi|191173390|ref|ZP_03034919.1| lysyl-tRNA synthetase LysU [Escherichia coli F11]
 gi|218692425|ref|YP_002400637.1| lysyl-tRNA synthetase [Escherichia coli ED1a]
 gi|300995361|ref|ZP_07181057.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|306815736|ref|ZP_07449885.1| lysyl-tRNA synthetase [Escherichia coli NC101]
 gi|331681066|ref|ZP_08381703.1| lysine--tRNA ligase [Escherichia coli H299]
 gi|110346080|gb|ABG72317.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli 536]
 gi|190906366|gb|EDV65976.1| lysyl-tRNA synthetase LysU [Escherichia coli F11]
 gi|218429989|emb|CAR10822.1| lysine tRNA synthetase, inducible [Escherichia coli ED1a]
 gi|222035857|emb|CAP78602.1| Lysyl-tRNA synthetase, heat inducible [Escherichia coli LF82]
 gi|300304862|gb|EFJ59382.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|305851398|gb|EFM51853.1| lysyl-tRNA synthetase [Escherichia coli NC101]
 gi|312948724|gb|ADR29551.1| lysyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|324015778|gb|EGB84997.1| lysyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|331081287|gb|EGI52448.1| lysine--tRNA ligase [Escherichia coli H299]
          Length = 505

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|74314615|ref|YP_313034.1| lysyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|73858092|gb|AAZ90799.1| lysine tRNA synthetase, inducible [Shigella sonnei Ss046]
          Length = 505

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|332798251|ref|YP_004459750.1| Lysyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332695986|gb|AEE90443.1| Lysyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 493

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 119/248 (47%), Gaps = 17/248 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77
           V+++G +  +R HG   F DI+D+ G  QV    D+     F + K +    ++ I+G V
Sbjct: 57  VKIAGRIMAIRGHGKAAFFDIQDNTGKIQVYIRKDNVSDDTFNLYKLLDIGDIVGIEGNV 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
                         G+I +S   + IL+ +   PLP          IR++ R+LDL  + 
Sbjct: 117 FKSK---------RGEISVSVNNMTILAKSLR-PLPEKWHGLKDTDIRYRQRYLDLIVNP 166

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
            + +  + R++II++MR  +  + F+E  TP+L+  +    AR F+          Y L 
Sbjct: 167 EVKQTFLTRSKIISAMRQFLDDKGFVEVETPVLSPIAGGAAARPFVTYHNALDMQLY-LR 225

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + Y + L+  GF++ +++   FR+E       P EF  +++  ++ +  D++   E+
Sbjct: 226 IATELYLKRLIVGGFEKVYELGKDFRNEGISIKHNP-EFTMVELYQAYADYKDMMKLAED 284

Query: 256 VLRGVFEE 263
           ++  + E+
Sbjct: 285 MIAYIAEK 292



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 452 ALEYGMPPTGGMGIGVDRLVMLLTDSYSIRDVILFP 487


>gi|145635060|ref|ZP_01790766.1| lysyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145267668|gb|EDK07666.1| lysyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 502

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 21/289 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W L  
Sbjct: 57  LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTWDL-- 114

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++            T ++ +   ++++L+ A   PLP        + +R++ R+LDL
Sbjct: 115 -GDIVGVKGTLFKTK--TDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDL 170

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+         
Sbjct: 171 ISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVD 229

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D++
Sbjct: 230 MY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLM 287

Query: 251 NTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
           +  E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 288 DNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATVKYGADK 336



 Score = 40.8 bits (94), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|71892044|ref|YP_277774.1| lysyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|123734157|sp|Q493E1|SYK_BLOPB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71796150|gb|AAZ40901.1| lysyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 509

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 137/309 (44%), Gaps = 23/309 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +H+   H+  ++ +  +   V ++G +   R  G   F+ IRD  G  Q+    +S    
Sbjct: 51  LHKKYAHT-SNVELIQLNIEVTIAGRIISQRIMGKASFITIRDAEGCIQLYITSNSLATN 109

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +      +W L   G ++   A  I     TG++ +  ++I +L+ +   PLP       
Sbjct: 110 LYDENIKQWDL---GDILG--ARGILFRTRTGELSIYCKEIRLLTKSLR-PLPDKFHGLN 163

Query: 121 PESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            +  +++ R+LDL   +   K    R+ +I+ +R  M   NF+E  TP++   +      
Sbjct: 164 NQETKYRQRYLDLIINENTRKTFKIRSLVISEIRQFMKKNNFMEVETPMMHTIAGGAIAH 223

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
             +      G    L  AP+ Y + L+  GF+R F+I   FR+E   S   P EF  +++
Sbjct: 224 PFITHHNKLGIDMYLRIAPELYLKKLVIGGFERIFEINRSFRNEGISSYHNP-EFTMMEI 282

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            M++ +  DI+  ++N+LR V ++    N ++              YG  + D ++P   
Sbjct: 283 YMAYADYRDIIILVQNLLRSVTQKILGSNIIN--------------YGDYELDFKHPFTQ 328

Query: 300 HNVTEHFVH 308
            ++ E  ++
Sbjct: 329 ISIKEAILY 337



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  GI  GIDR++MLL  +  +R+V LFP
Sbjct: 469 ALEYGLPPTAGIGIGIDRLIMLLTDSHTIRDVILFP 504


>gi|323164582|gb|EFZ50382.1| lysyl-tRNA synthetase [Shigella sonnei 53G]
          Length = 505

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP   +  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTADLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|194437248|ref|ZP_03069346.1| lysyl-tRNA synthetase LysU [Escherichia coli 101-1]
 gi|253775242|ref|YP_003038073.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254164062|ref|YP_003047170.1| lysyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|194423804|gb|EDX39793.1| lysyl-tRNA synthetase LysU [Escherichia coli 101-1]
 gi|242379656|emb|CAQ34479.1| lysyl-tRNA synthetase, subunit of lysyl-tRNA synthetase / Ap[4]A
           synthetase / Ap[3]A synthetase [Escherichia coli
           BL21(DE3)]
 gi|253326286|gb|ACT30888.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253975963|gb|ACT41634.1| lysine tRNA synthetase, inducible [Escherichia coli B str. REL606]
 gi|253980119|gb|ACT45789.1| lysine tRNA synthetase, inducible [Escherichia coli BL21(DE3)]
 gi|323960364|gb|EGB56002.1| lysyl-tRNA synthetase [Escherichia coli H489]
 gi|323969887|gb|EGB65165.1| lysyl-tRNA synthetase [Escherichia coli TA007]
          Length = 505

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|193067810|ref|ZP_03048776.1| lysyl-tRNA synthetase LysU [Escherichia coli E110019]
 gi|192958785|gb|EDV89222.1| lysyl-tRNA synthetase LysU [Escherichia coli E110019]
          Length = 505

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|300857281|ref|YP_003782265.1| lysyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300437396|gb|ADK17163.1| lysyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 503

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 126/271 (46%), Gaps = 28/271 (10%)

Query: 5   RTHSCGDLGVS-DV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++  + D   G  V ++G +   R HG   F D+ D YG  Q+    +    E 
Sbjct: 44  RTHTSKEVKDNYDTLEGKDVTVAGRLISKRVHGKAGFSDLYDRYGKIQLYIRINDVGEEK 103

Query: 62  AKSVRSEWV---LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            K  +S  +   L + G V     E I+ +I     EL A+ ++        PLP     
Sbjct: 104 LKEYKSYDIGDILSVTGRVFKTKTEEISIHIT--DFELVAKSLK--------PLPEKWHG 153

Query: 119 EYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                +R++ R++DL      RDT     +KRT II S+R  +  +++IE  TPIL++ +
Sbjct: 154 LKDPDLRYRQRYVDLIINSDVRDTF----LKRTAIIKSIREFLDNKDYIEVETPILSSIA 209

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           Y L  A + Y + L+  GF++ ++I  CFR+E       P 
Sbjct: 210 GGAAAKPFTTHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKCFRNEGMDIRHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           E+  +++  +F + +D++   EN++  V E+
Sbjct: 268 EYTSIELYEAFADYNDMMEITENMIAYVCEK 298



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VM L  A ++R+V LFP
Sbjct: 460 ALEIGMPPTGGLGIGVDRLVMFLTNATSIRDVILFP 495


>gi|229846241|ref|ZP_04466353.1| lysyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229811245|gb|EEP46962.1| lysyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 502

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 129/293 (44%), Gaps = 29/293 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69
           + + G  V+++G +   R  G   F+ I+D  G  Q+    D+   ++ K     W    
Sbjct: 57  LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEDVYKDDVGTWDLGD 116

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           ++ + G +             T ++ +   ++++L+ A   PLP        +  R++ R
Sbjct: 117 IIGVKGTLFKTK---------TDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEARYRQR 166

Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186
           +LDL   +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+     
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNA 225

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ + 
Sbjct: 226 LDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADY 283

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
            D+++  E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 284 HDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATVKYGADK 336



 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|332346138|gb|AEE59472.1| lysyl-tRNA synthetase LysS [Escherichia coli UMNK88]
          Length = 505

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP   +  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAVLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|325978710|ref|YP_004288426.1| asparaginyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325178638|emb|CBZ48682.1| asparaginyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 448

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 115/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+          +  F   K +
Sbjct: 15  VGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKFGEEEGTEKFNTIKHL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + I G+V   S             EL    +EI+  +E+ P+     +E+     
Sbjct: 75  NQETSILITGIVKEDSRSKFG-------YELDVTDLEIVGHSEDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDHRHLWLRSRKQMAIMQVRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAI 295


>gi|312373653|gb|EFR21355.1| hypothetical protein AND_17160 [Anopheles darlingi]
          Length = 541

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 35/267 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + G VH  R  G   FL +R      Q        C        S+ ++   G +   
Sbjct: 99  VWVRGRVHTSRCKGKQCFLVLRQQSSTVQ--------CLLAVNETVSKQMVKFSGSIPRE 150

Query: 81  SAETINANII---------TGQ-IELSAQKIEILSVAE-ELPLPVFG-----EREYPESI 124
           S   + A +I         T Q +EL   ++ +LS A+ +LPL +       + + PE++
Sbjct: 151 SIIDLKARVIPVEQRIESCTEQTLELHVLELFLLSAAKAQLPLQIEDASRPEKSDDPEAL 210

Query: 125 RFKY--------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           + +         R LDLR             +    R  + A+ F E  TP + +++ EG
Sbjct: 211 KIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDVLTAKGFTEIHTPKIISAASEG 270

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +    S     ++ A  Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R   EF  
Sbjct: 271 GANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVG 328

Query: 237 LDMEMSF-VEQDDILNTMENVLRGVFE 262
           LD+EM+F     ++L+T+ N    +F+
Sbjct: 329 LDLEMAFKYHYHEVLDTIGNTFTEMFK 355



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 8/84 (9%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           YD+   G EI SG  R H  + +++      + +SK            AF+ G PPH G 
Sbjct: 456 YDMFMRGEEILSGAQRIHDPDYLIERAKLHAIDLSK------IAAYIDAFRYGCPPHAGG 509

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             G++R+VML LG  N+R+ S+FP
Sbjct: 510 GIGMERVVMLYLGLDNIRKTSMFP 533


>gi|313238210|emb|CBY13303.1| unnamed protein product [Oikopleura dioica]
          Length = 603

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 36/263 (13%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           S GDL  S     V +   +H  R  G  ++F+ +R+     Q +   D     I K V 
Sbjct: 144 SVGDLDESMDKKSVWIRARLHNSRAQGSAMVFMTLRESQFTCQALLLAD-----IEKGV- 197

Query: 67  SEWVLCIDGLVMSRSAETINANIITG--QIELSAQK------IEILSVAEELP-LPVFGE 117
           S+ +L     +   S   I+A+++    +IE   QK       +   V++ LP LP+  E
Sbjct: 198 SKQMLKYAASLSKESIIDIHADVVKSPTKIESCTQKNVELKVKQFFVVSKSLPILPLQIE 257

Query: 118 -----------------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN 160
                            R  P++ R   R LDLR  T H     +  +    R  +  + 
Sbjct: 258 DASRAEKADGEPDDGLVRVNPDT-RLDNRVLDLRTTTKHAIFRIQAAVCRLFRNHLTNKG 316

Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
           F E  TP + +++ EG  +    S   + +F  L Q+PQ YKQ+ +A+ F++ F     F
Sbjct: 317 FTEIHTPKIISAASEGGANVFTLSYFKRDAF--LAQSPQLYKQMAIAADFEKVFTTGAVF 374

Query: 221 RDEDPRSDRLPGEFYQLDMEMSF 243
           R ED  + R   EF  LDMEM+F
Sbjct: 375 RAEDSNTHRHLTEFVGLDMEMAF 397



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++++   + GI+ + +E        AF+ G PPH G   
Sbjct: 518 YDMFMRGEEILSGAQRIHDPDLLIERAHHHGINLKHIE----AYIEAFKYGCPPHAGGGI 573

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  N+R  SLFP
Sbjct: 574 GMERVTMLYLGLHNIRMASLFP 595


>gi|260581089|ref|ZP_05848910.1| lysyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|260092218|gb|EEW76160.1| lysyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 502

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 129/293 (44%), Gaps = 29/293 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69
           + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W    
Sbjct: 57  LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTWDLGD 116

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           ++ I G +             T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 117 IVGIKGTLFKTK---------TDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186
           +LDL   +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+     
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNA 225

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ + 
Sbjct: 226 LDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADY 283

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
            D+++  E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 284 HDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATIKYGADK 336



 Score = 40.8 bits (94), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|307595594|ref|YP_003901911.1| asparaginyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307550795|gb|ADN50860.1| asparaginyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 429

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 26/292 (8%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAKSVR 66
           S  D+   + G+ V + GWV+R R     IFL +RD  GI Q V N  D     IA  + 
Sbjct: 2   SIKDVFSLNEGAEVTIRGWVYRKRELKDKIFLVVRDGSGIIQAVINKSDPNTAGIASKLN 61

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  L + G+V              G  E+  + I+   + +  P+     +   E +  
Sbjct: 62  IESSLMLTGVVKKEPRAP-------GGAEVHVRSIDWYYIGDPFPINEDAAKADSEYL-L 113

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L +R   +   +  R  +  ++     +  + E   P+  +++ EG          
Sbjct: 114 DVRHLWIRSRRMWAILRVRHTVFGAIHEFFRSRGYYEVQGPMFVSAAVEGGATLFPVKYF 173

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           ++   Y L Q+ Q Y ++L+ +  ++ + +AP FR E  R+ R   EF+  + E ++++ 
Sbjct: 174 DREDVY-LTQSSQFYLEVLIYT-LEKVYTVAPSFRAEPSRTRRHLTEFWHAEAEEAWLQF 231

Query: 247 DDILNTMEN----VLRGVFEE------FSNGNT-----VSNNFLRICYDDAI 283
           D +LN +E+    ++  V EE        N +T     V   F R+ YD+AI
Sbjct: 232 DGLLNLLEDLITYIVNKVLEERQDELKLLNRDTKILENVKPPFYRVSYDEAI 283



 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  GG R +  E +L      G+  E     +       + G  PH G   G
Sbjct: 345 LAPEGYGEIVGGGERIYDYEELLSKIKKFGLKPE----DYDWYLDLRRYGSVPHAGFGLG 400

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           +DR+VM + G  ++R+   FP
Sbjct: 401 VDRLVMWVCGLDHIRDALPFP 421


>gi|256025006|ref|ZP_05438871.1| lysyl-tRNA synthetase [Escherichia sp. 4_1_40B]
          Length = 505

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|170083987|ref|XP_001873217.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650769|gb|EDR15009.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 538

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 131/280 (46%), Gaps = 34/280 (12%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAK---SVRSE 68
           S VG  V L   V   R  G  ++FL++R      Q  +   P+    ++ K    +  E
Sbjct: 84  SRVGEIVVLRARVQTSRAQGNKMVFLNLRQTTDTVQALLTVTPEKVSKQMVKWTAGLADE 143

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPES---- 123
            ++ ++G V ++  E I +  ++  +E+   +I ++S +   LP  V  +   P++    
Sbjct: 144 SIILVEGTV-TKVQEPIKSASVS-DVEIHVHQIHLISGIDGRLPFSV-EDAARPDTDLET 200

Query: 124 -----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                       R   R +DLR  T       ++ I +  R  + +  FIE  +P L  +
Sbjct: 201 SDVQYNRVLLETRLNNRIVDLRTQTSQAIFKIQSAIGDLFREYLSSHGFIEIHSPKLQGA 260

Query: 173 SPE-GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           + E GA  F V     +G+ Y L Q+PQ  KQ+ +A+ F+R ++I P FR ED  + R  
Sbjct: 261 ATESGASVFKVG--YFKGNAY-LGQSPQLAKQMAIAADFERVYEIGPVFRAEDSNTHRHL 317

Query: 232 GEFYQLDMEMSFVEQ-DDILNTME----NVLRGVFEEFSN 266
            EF  LD+EM+  E   ++L  ++    ++ RG+ E+++ 
Sbjct: 318 TEFIGLDLEMTIEEHYHEVLEVLDGLFLSIFRGLREKYTK 357



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H   V+ +A  + G+  E ++    G    F+ G  PHGG   
Sbjct: 453 YDFFMRGEEILSGAQRIHDPAVLCEAMRSKGVDPESMKPYVDG----FRMGCNPHGGGGI 508

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML L   N+R  SLFP
Sbjct: 509 GLERVVMLFLKLNNIRRASLFP 530


>gi|238923547|ref|YP_002937063.1| aspartyl-tRNA synthetase, non-discriminating [Eubacterium rectale
           ATCC 33656]
 gi|238875222|gb|ACR74929.1| aspartyl-tRNA synthetase, non-discriminating [Eubacterium rectale
           ATCC 33656]
          Length = 461

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 130/327 (39%), Gaps = 33/327 (10%)

Query: 11  DLGVSDV------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           DLG++++      G  +++ G +H +R  G + F+ +R   G+ Q V  P  + F +   
Sbjct: 30  DLGIAEILAGDYEGKNIKVKGAIHTIRDMGEVAFIVLRRRDGLVQCVYEPGKSQFSVDDL 89

Query: 65  VRSEWV-LCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPE 122
             ++ V +C       RS             EL    I ILS  AE +PL +  + +   
Sbjct: 90  KEADTVEVCGTYKSDDRSP---------NGFELRLDTIIILSEPAEPMPLQI-NKWKLNT 139

Query: 123 SIRFKY--RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           S+  K   R + LR          +  I    R  +    F E  TP L A S EG  + 
Sbjct: 140 SLEAKLNNRAVALRNPRERATFRIQEGITRGFRDFLYNNGFTEIHTPKLGAKSAEGGANL 199

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 ++ +   L Q+PQ YKQ+ M   FDR F+ AP FR E   + R   E+  LD E
Sbjct: 200 FKLEYFHRPAI--LQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFE 256

Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           M +++  +DI+      L+   E            L+I   D      T  P +R     
Sbjct: 257 MGYIDGFEDIMEMETGFLQYTMELLKTSYAKELELLKIKLPDV-----TSIPRVRFDEAK 311

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEV 326
             V E +     R F     + P  EV
Sbjct: 312 QRVAEKYN----RQFRNPFDLEPEEEV 334



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EI +GG R H    +++  +  G+  E +E+       AF+ GMPPHGG
Sbjct: 373 TLSFDLLFRGLEITTGGQRIHDYNKLMEKIAKRGMETEGMESYLS----AFKYGMPPHGG 428

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M L+G  NVRE +LFP
Sbjct: 429 LGIGLERLTMQLIGEDNVREATLFP 453


>gi|118444238|ref|YP_877136.1| lysyl-tRNA synthetase [Clostridium novyi NT]
 gi|259511525|sp|A0PXN4|SYK_CLONN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|118134694|gb|ABK61738.1| lysyl-tRNA synthetase [Clostridium novyi NT]
          Length = 510

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 129/285 (45%), Gaps = 28/285 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCID 74
           G  V ++G +   R HG   F DIRD YG  Q+    +    E  K  ++  +   + I 
Sbjct: 69  GKNVTVAGRLMSKRVHGKAGFSDIRDRYGKIQLYIKINDVGEEKLKEYKTFDIGDFVSIT 128

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
           G V             TG+I L     ++LS + + LP    G ++    +R++ R++DL
Sbjct: 129 GTVFKTK---------TGEITLHILDFQLLSKSLKPLPEKFHGLKD--PDLRYRQRYVDL 177

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              + + +  +KRT II ++R  +   +F+E  TPIL+  +    AR F+          
Sbjct: 178 IMNEDVKETFMKRTAIIKAIREFLDNRDFLEVETPILSPIAGGAAARPFITHHNALDIDM 237

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + Y + L+  GF++ ++I   FR+E       P EF  +++  ++ + +D++ 
Sbjct: 238 Y-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDVRHNP-EFTAIELYEAYADYNDMME 295

Query: 252 TMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
             EN++  V E+ +    V            + RI   DA++ Y 
Sbjct: 296 ITENMVAYVCEKVNGTTKVMYEGTEIDFKPPWRRITMVDAVKEYA 340



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M L  + ++R+V LFP
Sbjct: 469 ALEIGMPPTGGLGIGIDRLIMFLTDSSSIRDVILFP 504


>gi|145639268|ref|ZP_01794874.1| lysyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145271571|gb|EDK11482.1| lysyl-tRNA synthetase [Haemophilus influenzae PittII]
          Length = 502

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 127/294 (43%), Gaps = 31/294 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69
           + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W    
Sbjct: 57  LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTWDLGD 116

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           ++ + G +     +           EL+ +  E+  + + L PLP        + +R++ 
Sbjct: 117 IIGVKGTLFKTKTD-----------ELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQ 165

Query: 129 RFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSR 185
           R+LDL   +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+    
Sbjct: 166 RYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHN 224

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ +
Sbjct: 225 ALDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYAD 282

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
             D+++  E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 283 YHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336



 Score = 41.2 bits (95), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVTAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|16273131|ref|NP_439367.1| lysyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|1174526|sp|P43825|SYK_HAEIN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1574141|gb|AAC22865.1| lysyl-tRNA synthetase (lysU) [Haemophilus influenzae Rd KW20]
          Length = 502

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 127/294 (43%), Gaps = 31/294 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69
           + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W    
Sbjct: 57  LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTWDLGD 116

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           ++ I G +     +           EL+ +  E+  + + L PLP        + +R++ 
Sbjct: 117 IVGIKGTLFKTKTD-----------ELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQ 165

Query: 129 RFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSR 185
           R+LDL   +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+    
Sbjct: 166 RYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHN 224

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ +
Sbjct: 225 ALDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYAD 282

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
             D+++  E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 283 YHDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATIKYGADK 336



 Score = 40.8 bits (94), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|313245404|emb|CBY40142.1| unnamed protein product [Oikopleura dioica]
          Length = 603

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 36/263 (13%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           S GDL  S     V +   +H  R  G  ++F+ +R+     Q +   D     I K V 
Sbjct: 144 SVGDLDESMDKKSVWIRARLHNSRAQGSAMVFMTLRESQFTCQALLLAD-----IEKGV- 197

Query: 67  SEWVLCIDGLVMSRSAETINANIITG--QIELSAQK------IEILSVAEELP-LPVFGE 117
           S+ +L     +   S   I+A+++    +IE   QK       +   V++ LP LP+  E
Sbjct: 198 SKQMLKYAASLSKESIIDIHADVVKSPTKIESCTQKNVELKVKQFFVVSKSLPILPLQIE 257

Query: 118 -----------------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN 160
                            R  P++ R   R LDLR  T H     +  +    R  +  + 
Sbjct: 258 DASRAEKADGEPDDGLVRVNPDT-RLDNRVLDLRTTTKHAIFRIQAAVCRLFRNHLTNKG 316

Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
           F E  TP + +++ EG  +    S   + +F  L Q+PQ YKQ+ +A+ F++ F     F
Sbjct: 317 FTEIHTPKIISAASEGGANVFTLSYFKRDAF--LAQSPQLYKQMAIAADFEKVFTTGAVF 374

Query: 221 RDEDPRSDRLPGEFYQLDMEMSF 243
           R ED  + R   EF  LDMEM+F
Sbjct: 375 RAEDSNTHRHLTEFVGLDMEMAF 397



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++++   + GI+ + +E        AF+ G PPH G   
Sbjct: 518 YDMFMRGEEILSGAQRIHDPDLLIERAHHHGINLKHIE----AYIEAFKYGCPPHAGGGI 573

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  N+R  SLFP
Sbjct: 574 GMERVTMLYLGLHNIRMASLFP 595


>gi|289426405|ref|ZP_06428148.1| lysine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289153133|gb|EFD01851.1| lysine--tRNA ligase [Propionibacterium acnes SK187]
          Length = 1081

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDAYRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|168187058|ref|ZP_02621693.1| lysyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169295090|gb|EDS77223.1| lysyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 510

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 18/257 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCID 74
           G  V ++G +   R HG   F DIRD YG  Q+    D    E  K  ++  +   + I 
Sbjct: 69  GKNVIVAGRLMSKRVHGKAGFSDIRDRYGKIQLYIKIDDVGEEKLKEYKTFDIGDFVSIT 128

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G V       I  +I+  Q+   + K          PLP          +R++ R++DL 
Sbjct: 129 GTVFKTKTGEITLHIVDFQLLTKSLK----------PLPEKFHGLKDPDLRYRQRYVDLI 178

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
             + + +  +KRT II ++R  +   +F+E  TPIL+  +    AR F+          Y
Sbjct: 179 MNEEVKETFMKRTAIIKAIREFLDNRDFLEVETPILSPIAGGAAARPFVTHHNALDIDMY 238

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF++ ++I   FR+E       P EF  +++  ++ + +D++  
Sbjct: 239 -LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDVRHNP-EFTAIELYEAYADYNDMMEI 296

Query: 253 MENVLRGVFEEFSNGNT 269
            EN++  V E+  NG T
Sbjct: 297 TENMVAYVCEKV-NGTT 312



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M L  + ++R+V LFP
Sbjct: 469 ALEIGMPPTGGLGIGIDRLIMFLTDSSSIRDVILFP 504


>gi|259502149|ref|ZP_05745051.1| asparagine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259169767|gb|EEW54262.1| asparagine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 432

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 19/237 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAK-SVRSEWVLC 72
           VG  VR+  W+   R  G I FL +RD  G  Q +    N D   FE+AK  +  E    
Sbjct: 13  VGETVRIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNNVDEETFELAKHDLHQETSFY 72

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G +                 E+    I+++  +++ P+   G +E+       +R L 
Sbjct: 73  VTGEIAEDKRSKFG-------YEIHITDIDVVGTSDDYPI---GNKEHGIDFLLDHRHLW 122

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       +  R+R+  +         F +   PILT S+PEG  +       +Q ++ 
Sbjct: 123 LRSRKPWALMRIRSRVKLATMEFFNKHGFTQFDAPILTGSAPEGTTELFETDYFDQSAY- 181

Query: 193 ALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            L Q+ Q Y +   MA G  R + + P FR E  ++ R   EF+ ++ EM+++ +D+
Sbjct: 182 -LSQSGQLYGEAGAMALG--RIYTMGPTFRAEKSKTRRHLMEFWMIEPEMAWMHEDE 235


>gi|118587147|ref|ZP_01544576.1| lysyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|118432426|gb|EAV39163.1| lysyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
          Length = 496

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 110/244 (45%), Gaps = 16/244 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW--VLCIDGLVM 78
           V ++G +   R  G IIF DIRD  G  Q+ A  D      A   R++   +L   G VM
Sbjct: 64  VIIAGRIMTKRGAGKIIFADIRDVSGTVQIYARRDDLADNYALIRRADLGDILGFSGTVM 123

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
              A         G+  +   K+  LS A   PLP           R++ R+LDL  +  
Sbjct: 124 KTDA---------GETTILIDKLTWLSKALR-PLPDKYHGLTDIDTRYRKRYLDLISNPK 173

Query: 139 HKNI-VKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYALPQ 196
              + +KR++I+ ++R  M +  F+E  TPIL  S+    AR F+          Y L  
Sbjct: 174 SFEVFIKRSKIVKAIRNYMDSIGFLEVETPILQNSAGGAAARPFVTHHNALDIDMY-LRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + Y + L+  G +R ++I   FR+E   +   P EF  L+   ++ +  D++   EN+
Sbjct: 233 ATELYLKRLIVGGMERVYEIGRIFRNEGMDTRHNP-EFTTLESYGAYWDLSDVMIETENI 291

Query: 257 LRGV 260
           +R  
Sbjct: 292 IRAA 295



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 26/40 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GM P GG+  GIDR+ MLL    +VR+V LFP  +N
Sbjct: 457 ALEHGMAPTGGLGIGIDRLTMLLTNQTSVRDVLLFPTMRN 496


>gi|1311301|pdb|1LYL|A Chain A, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With
           Lysine
 gi|1311303|pdb|1LYL|B Chain B, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With
           Lysine
 gi|1311305|pdb|1LYL|C Chain C, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With
           Lysine
 gi|9954996|pdb|1E1O|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal For, Complexed With
           L
 gi|9954997|pdb|1E1T|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal Form Complexed With
           T Lysyl_adenylate Intermediate
 gi|9954998|pdb|1E22|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal Form Complexed With
           Lysine And The Non-Hydrolysable Atp Analogue Amp-Pcp
 gi|9954999|pdb|1E24|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal Form Complexed With
           Lysine And Atp And Mn2+
          Length = 504

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 67  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 124 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 180

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 181 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 238

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 239 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 297

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 298 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 346



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 463 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 498


>gi|291541007|emb|CBL14118.1| aspartyl-tRNA synthetase, archaeal type [Roseburia intestinalis
           XB6B4]
          Length = 443

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 28/265 (10%)

Query: 1   MHRYRTHSCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           +++  T   GDL   S  G  V+++G VH +R  G + F+ +R   G+ Q V       F
Sbjct: 7   VNKKETLEIGDLLTGSYEGKSVKVNGAVHTIRDMGEVAFIVLRKREGLLQCVYEEGKTQF 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGER 118
           ++ K ++    + ++G V                 E+   KI++LS  A  +PL +  + 
Sbjct: 67  DL-KDLKEAATIEVEGTVKPEERAPHG-------FEIRLDKIKVLSEPAAPMPLAI-SKW 117

Query: 119 EYPESIR--FKYRFLDLRRDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILT 170
           +   S+      R + LR      NI +R +      ++   R  +  + F E  TP + 
Sbjct: 118 KLNTSLEANLNNRAIALR------NIRERAKFRIQEGVVRGFRDFLYGQGFTEIHTPKIG 171

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           A S EG  +       ++ +   L Q+PQ YKQ+ M   FDR F+ AP FR E   + R 
Sbjct: 172 AKSAEGGANLFRLEYFHRPA--VLQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRH 228

Query: 231 PGEFYQLDMEMSFVEQDDILNTMEN 255
             E+  LD EM +++  + +  ME 
Sbjct: 229 LNEYTSLDFEMGYIDGFEDIMAMET 253



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EI +GG R H    +++     G+  E +E         F+ GMPPHGG
Sbjct: 355 TLSFDLLYQGLEITTGGQRIHDYNKLMEKIEKRGMESEGMEQYLS----VFKHGMPPHGG 410

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M L+G  NVRE +LFP
Sbjct: 411 LGIGLERLTMKLVGEDNVRETTLFP 435


>gi|323171560|gb|EFZ57206.1| lysyl-tRNA synthetase [Escherichia coli LT-68]
          Length = 505

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|331655961|ref|ZP_08356949.1| lysine--tRNA ligase [Escherichia coli M718]
 gi|331046315|gb|EGI18405.1| lysine--tRNA ligase [Escherichia coli M718]
          Length = 505

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVIRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|313829497|gb|EFS67211.1| putative lysyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
          Length = 988

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881


>gi|288905680|ref|YP_003430902.1| asparaginyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|288732406|emb|CBI13978.1| asparaginyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
          Length = 448

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 115/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+          +  F   K +
Sbjct: 15  VGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKFGEEEGTEKFNTIKHL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + I G+V   S             EL    +EI+  +E+ P+     +E+     
Sbjct: 75  NQETSILITGIVKEDSRSKFG-------YELDVTDLEIVGHSEDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDHRHLWLRSRKQMAIMQVRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAI 295


>gi|317121888|ref|YP_004101891.1| asparaginyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315591868|gb|ADU51164.1| asparaginyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 430

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 127/296 (42%), Gaps = 40/296 (13%)

Query: 14  VSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVR 66
           V+ VG +    V L+GWV+  R  G I FL +RD  G+ Q V + D       E+ + + 
Sbjct: 5   VAQVGRYEGQEVELAGWVYNRRSSGRIAFLLLRDGTGVIQCVLSRDRVGDQGLEVFEGLT 64

Query: 67  SEWVLCIDGLVMS-RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            E    + G+V + R A         G  EL    +E + VAE+ P+ +   +E+     
Sbjct: 65  QESSCRVRGVVRADRRA--------PGGYELDVTALEPVHVAEDYPIKL---KEHGVDFL 113

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L +R    +  +  R  ++ +    +  E F+    PILT S+PEG  +      
Sbjct: 114 MDHRHLWIRTPRQNAILRVRAAVMAAAAEALAREGFVRVDAPILTPSAPEGTTNLFETDY 173

Query: 186 VNQGSFYALPQAPQQYKQLL-MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
               ++  L Q+ Q Y +   MA G  + + + P FR E  ++ R   EF+ L+ E +F 
Sbjct: 174 FGDKAY--LSQSGQLYMEAACMALG--KVYCLGPTFRAEQSKTRRHLLEFWMLEPEAAFF 229

Query: 245 EQDDILNTMENVLRGV-----------FEEFSNG-----NTVSNNFLRICYDDAIR 284
             +D +   E ++R V            E            V   F RI YD+A+R
Sbjct: 230 THEDNVALQERLVRQVVLAVLERCPRELETLGRDPEHLRRQVEGPFARITYDEALR 285


>gi|116490302|ref|YP_809846.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni PSU-1]
 gi|116091027|gb|ABJ56181.1| Lysyl-tRNA synthetase (class II) [Oenococcus oeni PSU-1]
          Length = 496

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 110/244 (45%), Gaps = 16/244 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW--VLCIDGLVM 78
           V ++G +   R  G IIF DIRD  G  Q+ A  D      A   R++   +L   G VM
Sbjct: 64  VIIAGRIMAKRGAGKIIFADIRDVSGTVQIYARRDDLADNYALIRRADLGDILGFSGTVM 123

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
              A         G+  +   K+  LS A   PLP           R++ R+LDL  +  
Sbjct: 124 KTDA---------GETTILIDKLTWLSKALR-PLPDKYHGLTDIDTRYRKRYLDLISNPK 173

Query: 139 HKNI-VKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYALPQ 196
              + +KR++I+ ++R  M +  F+E  TPIL  S+    AR F+          Y L  
Sbjct: 174 SFEVFIKRSKIVKAIRNYMDSIGFLEVETPILQNSAGGAAARPFVTHHNALDIDMY-LRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + Y + L+  G +R ++I   FR+E   +   P EF  L+   ++ +  D++   EN+
Sbjct: 233 ATELYLKRLIVGGMERVYEIGRIFRNEGMDTRHNP-EFTTLESYGAYWDLSDVMIETENI 291

Query: 257 LRGV 260
           +R  
Sbjct: 292 IRAA 295



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 26/40 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GM P GG+  GIDR+ MLL    +VR+V LFP  +N
Sbjct: 457 ALEHGMAPTGGLGIGIDRLTMLLTNQTSVRDVLLFPTMRN 496


>gi|314986621|gb|EFT30713.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314990977|gb|EFT35068.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
          Length = 1081

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|145637034|ref|ZP_01792697.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145269688|gb|EDK09628.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 502

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 21/289 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W L  
Sbjct: 57  LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTWDL-- 114

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++            T ++ +   ++++L+ A   PLP        + +R++ R+LDL
Sbjct: 115 -GDIVGVKGTLFKTK--TDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDL 170

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+         
Sbjct: 171 ISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVD 229

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D++
Sbjct: 230 MY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLM 287

Query: 251 NTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
           +  E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 288 DNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATIKYGADK 336



 Score = 40.8 bits (94), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|291536653|emb|CBL09765.1| aspartyl-tRNA synthetase, archaeal type [Roseburia intestinalis
           M50/1]
          Length = 443

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 16/259 (6%)

Query: 1   MHRYRTHSCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           +++  T   GDL   S  G  V+++G VH +R  G + F+ +R   G+ Q V       F
Sbjct: 7   VNKKETLEIGDLLTGSYEGKSVKVNGAVHTIRDMGEVAFIVLRKREGLLQCVYEEGKTQF 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGER 118
           ++ K ++    + ++G V                 E+   KI++LS  A  +PL +  + 
Sbjct: 67  DL-KDLKEAATIEVEGTVKPEERAPRG-------FEIRLDKIKVLSEPAAPMPLAI-SKW 117

Query: 119 EYPESIR--FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           +   S+      R + LR          +  ++   R  + ++ F E  TP + A S EG
Sbjct: 118 KLNTSLEANLNNRAIALRNVRERAKFRIQEGVVRGFRDFLYSQGFTEIHTPKIGAKSAEG 177

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +       ++ +   L Q+PQ YKQ+ M   FDR F+ AP FR E   + R   E+  
Sbjct: 178 GANLFRLEYFHRPA--VLQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTS 234

Query: 237 LDMEMSFVEQDDILNTMEN 255
           LD EM +++  + +  ME 
Sbjct: 235 LDFEMGYIDGFEDIMAMET 253



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EI +GG R H    +++     G+  E +E         F+ GMPPHGG
Sbjct: 355 TLSFDLLYQGLEITTGGQRIHDYNKLMEKIEKRGMESEGMEQYLS----VFKHGMPPHGG 410

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M L+G  NVRE +LFP
Sbjct: 411 LGIGLERLTMKLVGEDNVRETTLFP 435


>gi|313816675|gb|EFS54389.1| lysyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|315099121|gb|EFT71097.1| lysyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
          Length = 1081

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|314984274|gb|EFT28366.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
          Length = 1081

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|313811482|gb|EFS49196.1| lysyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313831223|gb|EFS68937.1| lysyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834245|gb|EFS71959.1| lysyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314974099|gb|EFT18195.1| lysyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976611|gb|EFT20706.1| lysyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|315095443|gb|EFT67419.1| lysyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|327328499|gb|EGE70261.1| lysine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327444286|gb|EGE90940.1| lysyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327444834|gb|EGE91488.1| lysyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|328759934|gb|EGF73518.1| lysine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 1081

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|289428675|ref|ZP_06430358.1| lysine--tRNA ligase [Propionibacterium acnes J165]
 gi|289158073|gb|EFD06293.1| lysine--tRNA ligase [Propionibacterium acnes J165]
 gi|313808046|gb|EFS46527.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313819615|gb|EFS57329.1| lysyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313822061|gb|EFS59775.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313823704|gb|EFS61418.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313826027|gb|EFS63741.1| lysyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|314924758|gb|EFS88589.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314961955|gb|EFT06056.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314978937|gb|EFT23031.1| lysyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|315083622|gb|EFT55598.1| lysyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315087044|gb|EFT59020.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315089219|gb|EFT61195.1| lysyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|327329638|gb|EGE71394.1| lysine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327446323|gb|EGE92977.1| lysyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|328752465|gb|EGF66081.1| lysyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
          Length = 1081

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|309973326|gb|ADO96527.1| Lysyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 502

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 21/289 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W L  
Sbjct: 57  LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTWDL-- 114

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++            T ++ +   ++++L+ A   PLP        + +R++ R+LDL
Sbjct: 115 -GDIVGVKGTLFKTK--TDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDL 170

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+         
Sbjct: 171 ISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVD 229

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ +  D++
Sbjct: 230 MY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADYHDLM 287

Query: 251 NTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
           +  E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 288 DNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336



 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|45657773|ref|YP_001859.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|59798559|sp|Q72R38|SYK_LEPIC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|45601013|gb|AAS70496.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 495

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 126/287 (43%), Gaps = 38/287 (13%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVM 78
           +L G +H  R  G   F  ++D+ GI Q+ A  D      + I KS+    ++ ++G + 
Sbjct: 55  KLGGRLHSKRVMGKASFAHLKDNSGIIQLYATKDDLGETQYSIFKSLDLGDIIGLEGYLF 114

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKYRFL 131
                        G+I L    +E+LS     PLPV  E++            R++ R++
Sbjct: 115 KTQK---------GEITLHVTSVELLSKCIR-PLPVVKEKDGVVYDAFADVEQRYRMRYV 164

Query: 132 DL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL   D +    + R++I++ +R  +  E F+E  TP++   +    AR F+        
Sbjct: 165 DLIVNDHVRDTFITRSKIVSEIRSFLTQEGFLEVETPMMQPIAGGAAARPFVTHHNTLDM 224

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             + L  AP+ Y + L+  G DR F++   FR+E   +   P EF  ++  M+F +   +
Sbjct: 225 QLF-LRIAPELYLKRLIVGGMDRVFELNRNFRNEGISTKHNP-EFTMMEAYMAFGDMSTM 282

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           L+  E ++  + +             +IC    I +YG D  DL  P
Sbjct: 283 LDLTERLITHLAQ-------------KICGTLKI-QYGKDLIDLSPP 315



 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP GG+  GIDR+VMLL  + ++R+  LFP+
Sbjct: 454 RALEYGMPPTGGLGIGIDRLVMLLTNSHSIRDTILFPL 491


>gi|89892965|ref|YP_516452.1| hypothetical protein DSY0219 [Desulfitobacterium hafniense Y51]
 gi|219666232|ref|YP_002456667.1| lysyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|89332413|dbj|BAE82008.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219536492|gb|ACL18231.1| lysyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 488

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 128/292 (43%), Gaps = 21/292 (7%)

Query: 3   RY-RTHSCGDL--GVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           RY RTH   ++  G   + G  V+++G +   R  G ++F  I+D  G  Q     D   
Sbjct: 29  RYQRTHMAQEILDGFDTLEGQEVKIAGRMMSKRDQGKVVFTHIQDFSGQIQAYIRKDDVG 88

Query: 59  ---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
              FE+        ++ I G V              G+I + A +++ILS +   PLP  
Sbjct: 89  EDWFELISKFDIGDIVGIKGTVFRTR---------RGEISVHANEVQILSKSMR-PLPEK 138

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASS 173
                   +R++ R++DL  +   +N+ V R++II SMR  +  + F+E  TP L T   
Sbjct: 139 FHGLTNVELRYRQRYVDLIMNPEVRNVFVMRSKIIRSMRNFLEGQGFLEVETPTLHTIPG 198

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A +   + L+  GFD+ F+I   FR+E       P E
Sbjct: 199 GAAARPFITHHNTLDMDLY-LRIALELPLKRLIVGGFDKVFEIGRNFRNEGISIKHNP-E 256

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           F  +++  ++   +DI+   EN++  + +E      V+     I +    RR
Sbjct: 257 FTMMELYQAYANFEDIMELTENMISAIAKEVHGTTEVTYQGQMIDFKTPWRR 308



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + G+PP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 444 QALEYGLPPTGGLGIGIDRLVMLLTDSASIRDVILFP 480


>gi|290889690|ref|ZP_06552779.1| hypothetical protein AWRIB429_0169 [Oenococcus oeni AWRIB429]
 gi|290480687|gb|EFD89322.1| hypothetical protein AWRIB429_0169 [Oenococcus oeni AWRIB429]
          Length = 496

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 110/244 (45%), Gaps = 16/244 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW--VLCIDGLVM 78
           V ++G +   R  G IIF DIRD  G  Q+ A  D      A   R++   +L   G VM
Sbjct: 64  VIIAGRIMAKRGAGKIIFADIRDVSGTVQIYARRDDLADNYALIRRADLGDILGFSGTVM 123

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
              A         G+  +   K+  LS A   PLP           R++ R+LDL  +  
Sbjct: 124 KTDA---------GETTILIDKLTWLSKALR-PLPDKYHGLTDIDTRYRKRYLDLISNPK 173

Query: 139 HKNI-VKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYALPQ 196
              + +KR++I+ ++R  M +  F+E  TPIL  S+    AR F+          Y L  
Sbjct: 174 SFEVFIKRSKIVKAIRNYMDSIGFLEVETPILQNSAGGAAARPFVTHHNALDIDMY-LRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + Y + L+  G +R ++I   FR+E   +   P EF  L+   ++ +  D++   EN+
Sbjct: 233 ATELYLKRLIVGGMERVYEIGRIFRNEGMDTRHNP-EFTTLESYGAYWDLSDVMIETENI 291

Query: 257 LRGV 260
           +R  
Sbjct: 292 IRAA 295



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 26/40 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GM P GG+  GIDR+ MLL    +VR+V LFP  +N
Sbjct: 457 ALEHGMAPTGGLGIGIDRLTMLLTNQTSVRDVLLFPTMRN 496


>gi|145353608|ref|XP_001421099.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581335|gb|ABO99392.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 503

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 134/338 (39%), Gaps = 59/338 (17%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEI--AKSVR 66
           D G S VG  + L GW   VR   G+ F+D+ D   I+  Q V N  SA ++   A  V 
Sbjct: 38  DGGASRVGEALELRGWARSVRTQKGMAFIDLNDGSAISGMQAVVNEGSAAWDALDAGGVS 97

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +   L + G +++       A       EL+ ++I+++  A+    P+  +R   E +R 
Sbjct: 98  TGAALRVKGKLVASPGGKQAA-------ELAVEEIDVIGTADPETYPLQKKRHTLEYLR- 149

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-RDFLVPSR 185
               L  R +T+      R ++  +         F+  +TPI+TAS  EGA   F V + 
Sbjct: 150 SIAHLRPRTNTIGAVARVRNQLAYATHTFFQEHGFLYANTPIITASDCEGAGEQFQVTTL 209

Query: 186 V---------------NQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221
           V                 GS      F+  P       QL   +MA   +  +   P FR
Sbjct: 210 VEALKNNRPSSDLPKNKDGSIDYSQDFFGKPSYLTVSGQLNGEIMACAVNDIYTFGPTFR 269

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR----GVFE------EFSNGNTVS 271
            E+  + R   EF+ ++ E++F + +D ++  E  L+     V E      EF   N   
Sbjct: 270 AENSNTSRHLAEFWMVEPELAFADLNDDMDCAEAYLKYCLNHVLEHCDEDLEFFEKNISK 329

Query: 272 NN------------FLRICYDDAIRRYGTDKPDLRNPI 297
           +N            F RI Y +A+      K     PI
Sbjct: 330 DNLRERLRNVASQEFARITYTEAVEHVLNAKKKFEFPI 367


>gi|46138565|ref|XP_390973.1| hypothetical protein FG10797.1 [Gibberella zeae PH-1]
          Length = 534

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 125/298 (41%), Gaps = 31/298 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC---FEIAKSVRSEWV----- 70
           V +SGWV  VR   G+ F+DI D   +   QVV +   A       A  ++  WV     
Sbjct: 52  VEVSGWVRSVRKSSGVRFIDITDGSSMRPVQVVVDKSLAADMRPGAAVRLKGTWVDESGK 111

Query: 71  --LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             L      +  +      +    Q EL   ++E L  ++ +  P+  + + PES+R   
Sbjct: 112 KTLASSSAQLPDTKGECETSTSPEQPELKVSEVEFLGGSDPMTYPIQNKYQSPESLR--- 168

Query: 129 RFLDLR-RDTLHKNIVKRTRIINSMRCRMI-AENFIECSTPILTASSPEGARDFLVPSRV 186
               LR R  L+  +++      +M  +    E F +   PI+T+S  EGA +  V    
Sbjct: 169 TISHLRSRTPLNSTMLRLRSDATAMLTQFFFRERFQQTHPPIITSSDCEGAGEAFVVKAS 228

Query: 187 NQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +   F+  P+      QL    +A      + ++P FR E   + R   EFY L+ EMSF
Sbjct: 229 SPDEFFRAPKYLTVSSQLHLEALAQSLGNVWTLSPTFRAEKSDTSRHLSEFYMLEAEMSF 288

Query: 244 VEQ-DDILN---TMENVLRGVFEEFSNGNTVSNNFL-------RICYDDAIRRYGTDK 290
           V+  ++++N    M N L    +E +    +  N +       R+ + D + +   D+
Sbjct: 289 VDDMNEVMNLAQRMLNSLTSGLKELNAAKELKKNRVDSKEPSERLAFKDLVEQEQLDR 346



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 8/93 (8%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV-VENRFGGLYRAF-----QCGMPPHG 537
           LV N  E+A G +R H    + +    +G+  EV  ++  GG   A+     + G PPHG
Sbjct: 443 LVPNMGELAGGSMREHRLPQLKENMRALGL--EVPSKHSAGGKEMAWYLDLRRWGCPPHG 500

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G   G DR++  L G  NVR+V  FP   + CD
Sbjct: 501 GFGLGFDRLLSYLSGVPNVRDVVPFPRHYHRCD 533


>gi|314957544|gb|EFT01647.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
          Length = 1081

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|313773647|gb|EFS39613.1| lysyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
          Length = 1081

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|306833900|ref|ZP_07467024.1| asparagine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304423901|gb|EFM27043.1| asparagine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 448

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 115/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+          +  F   K +
Sbjct: 15  VGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKFGEEEGTEKFNTIKHL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + I G+V   S             EL    +EI+  +E+ P+     +E+     
Sbjct: 75  NQETSILITGIVKEDSRSKFG-------YELDVTDLEIVGHSEDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDHRHLWLRSRKQMAIMQVRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAI 295


>gi|295131136|ref|YP_003581799.1| lysine--tRNA ligase [Propionibacterium acnes SK137]
 gi|291375349|gb|ADD99203.1| lysine--tRNA ligase [Propionibacterium acnes SK137]
 gi|313763493|gb|EFS34857.1| lysyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313793883|gb|EFS41907.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313801274|gb|EFS42525.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313813494|gb|EFS51208.1| lysyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313840003|gb|EFS77717.1| lysyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314920700|gb|EFS84531.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314930579|gb|EFS94410.1| lysyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314968411|gb|EFT12509.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|315081159|gb|EFT53135.1| lysyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315100396|gb|EFT72372.1| lysyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315106910|gb|EFT78886.1| lysyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|315109100|gb|EFT81076.1| lysyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327452090|gb|EGE98744.1| lysyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
 gi|327454872|gb|EGF01527.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|328755296|gb|EGF68912.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
          Length = 1081

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|260582140|ref|ZP_05849934.1| lysyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094772|gb|EEW78666.1| lysyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 502

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 21/289 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W L  
Sbjct: 57  LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTWDL-- 114

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++            T ++ +   ++++L+ A   PLP        + +R++ R+LDL
Sbjct: 115 -GDIVGVKGTLFKTK--TDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDL 170

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+         
Sbjct: 171 ISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVD 229

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ +  D++
Sbjct: 230 MY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADYHDLM 287

Query: 251 NTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
           +  E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 288 DNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATVKYGADK 336



 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|314963762|gb|EFT07862.1| lysyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
          Length = 1081

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|225375172|ref|ZP_03752393.1| hypothetical protein ROSEINA2194_00796 [Roseburia inulinivorans DSM
           16841]
 gi|225212982|gb|EEG95336.1| hypothetical protein ROSEINA2194_00796 [Roseburia inulinivorans DSM
           16841]
          Length = 443

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+ +G EI +GG R H   ++L+     G++ E +E         F+ GMPPHGG
Sbjct: 355 TLSFDLLYHGLEITTGGQRIHDYNMLLEKIEKRGMTTEGMEQYMD----TFKHGMPPHGG 410

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M L+G  NVRE +LFP
Sbjct: 411 LGIGLERLTMKLIGEDNVRETTLFP 435



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 135/320 (42%), Gaps = 46/320 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+++G VH +R  G + F+ +R   G+ Q V       F++ K ++    + ++G V
Sbjct: 25  GKTVKVNGAVHTIRDMGEVAFVVLRKREGLLQCVFEEGKTKFDL-KDLKEAATVEVEGAV 83

Query: 78  MSRSAETINANIITGQIELSAQKIEILS--VAEELPLPV-FGEREYPESIRFKYRFLDLR 134
            S               E+    I +LS  VA   P+P+   + +   S+          
Sbjct: 84  KSEDR-------APNGFEIRLDSIRVLSEPVA---PMPLAISKWKLNTSLEANLN----N 129

Query: 135 RDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R    +NI +R +      ++   R  +  + F E  TP + A   EG  +       ++
Sbjct: 130 RSIALRNIRERAKFKIQEGVVRGFRDFLYEQGFTEIHTPKIGAKGAEGGANMFRMDYFHR 189

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE--- 245
            +   L Q+PQ YKQ+ M   FDR F+ AP FR E   + R   E+  LD EM +++   
Sbjct: 190 PA--VLAQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 246

Query: 246 -----QDDILNTMENVLRGVFEEFSN--GNTVSN--NFLRICYDDAIR----RYGTDKPD 292
                +   L  M ++L+  +E+     G T+ N      + +D+A R    +YG     
Sbjct: 247 DIMAMETGFLQYMVDLLKKDYEKELKILGVTLPNVDKIPTVRFDEAKRKVAEKYGR---K 303

Query: 293 LRNPIIMHNVTEHFVHSEFR 312
           +RNP  +    E  +   F+
Sbjct: 304 IRNPYDLEPEEEALIGQYFK 323


>gi|225016227|ref|ZP_03705419.1| hypothetical protein CLOSTMETH_00130 [Clostridium methylpentosum
           DSM 5476]
 gi|224950985|gb|EEG32194.1| hypothetical protein CLOSTMETH_00130 [Clostridium methylpentosum
           DSM 5476]
          Length = 502

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 129/281 (45%), Gaps = 22/281 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V L+G +   R  G   F+D+RD+ G  Q     D+   E  +S + +W +   G +
Sbjct: 61  GKVVSLAGRMMSKRGMGKASFVDLRDNTGRLQSYVRIDAVGEETYQSFK-KWDI---GDI 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-GEREYPESIRFKYRFLDLRRD 136
           +    E    +   G+I + A KI +LS +       + G R+     R++ R++DL  +
Sbjct: 117 IGIEGEVFRTH--KGEISIKASKITLLSKSLLPLPEKWHGLRD--TDTRYRQRYVDLIVN 172

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
             +    VKR+RII  +R  +  E F+E  TP+L   +    AR F+          Y +
Sbjct: 173 PDVKDTFVKRSRIITEIRRFLDGEGFLEVETPVLHNIAGGASARPFITHHNALNIDMY-M 231

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  GFDR ++I   FR+E   +   P EF  L++  ++ + + +++  E
Sbjct: 232 RIALELHLKRLIVGGFDRVYEIGRVFRNEGTDTKHNP-EFTLLELYQAYTDYEGMMDITE 290

Query: 255 NVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286
            +++ V +      TV            F RI   DA+++Y
Sbjct: 291 RMIKTVAQNVLGTTTVQYGEHEIDLGKPFTRITMTDAVKQY 331



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL     +R+V LFP
Sbjct: 458 ALEYGMPPTGGLGIGIDRLVMLLTNNDCIRDVLLFP 493


>gi|116328407|ref|YP_798127.1| lysine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116331136|ref|YP_800854.1| lysine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
 gi|122281115|sp|Q04SM4|SYK_LEPBJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|122283805|sp|Q050Q1|SYK_LEPBL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116121151|gb|ABJ79194.1| Lysine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116124825|gb|ABJ76096.1| Lysine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 495

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 126/287 (43%), Gaps = 33/287 (11%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLVM 78
           +L G +H  R  G   F  ++D  GI Q+ A  D      + I KS+    ++ ++G + 
Sbjct: 55  KLGGRLHSKRVMGKASFAHLKDSTGIIQLYATRDDLGEISYSIFKSLDLGDIIGLEGYLF 114

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKYRFL 131
                        G++ L    +E+L+     PLPV  E++            R++ R++
Sbjct: 115 KTQK---------GEVTLHVTSVELLAKCIR-PLPVVKEKDGVIYDAFADVEQRYRMRYV 164

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL   D +    + R+RI++ +R  +  E F+E  TP++   +    AR F+        
Sbjct: 165 DLVVNDHVRDTFITRSRIVSEIRNFLTNEGFLEVETPMMQPIAGGAAARPFVTHHNTLDM 224

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             + L  AP+ Y + L+  G DR F++   FR+E   +   P EF  ++  ++F + + +
Sbjct: 225 QLF-LRIAPELYLKRLIVGGMDRVFELNRNFRNEGISTKHNP-EFTMMEAYIAFADMNTM 282

Query: 250 LNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
           L+  E ++  + ++      +         S  + +I Y D I+ Y 
Sbjct: 283 LDLTERLITHLAQKIHGALKIQYGKDLIDLSPPWRKITYTDIIKEYS 329



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP GG+  GIDR+VMLL  + ++R+  LFP+
Sbjct: 454 RALEYGMPPTGGLGIGIDRLVMLLTDSHSIRDTILFPL 491


>gi|162454192|ref|YP_001616559.1| asparaginyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
 gi|226695301|sp|A9GBR2|SYN_SORC5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|161164774|emb|CAN96079.1| asparaginyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
          Length = 446

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 120/288 (41%), Gaps = 32/288 (11%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD--SACFEIAKSVRSEWVL 71
           + VGS V L GW++  R  G + FL++RD +G  Q V+A  D     F  A  V  E V+
Sbjct: 14  AHVGSTVVLRGWLYNKRSSGKLHFLELRDGFGTVQCVMAKSDVGDEVFAAADKVTQESVI 73

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRF 130
            + G V +            G  E++A    +L   A E P+     +E+       +R 
Sbjct: 74  DVVGEVKAHPKR-------AGVYEIAASGFRVLGPTAGEYPI---SPKEHGTDFLMDHRH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II ++R       F     P+ T ++ EG           + +
Sbjct: 124 LWLRSKRQHAILRVRHTIIQAIRDFFDGRGFTLVDAPVFTPNACEGTSTLFQTDYHGEKA 183

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A+ F + +   P FR E  ++ R   EF+ ++ E++F++    +
Sbjct: 184 Y--LTQSGQLYMEAAAAA-FGKAYCFGPTFRAEKSKTRRHLAEFWMVEPEVAFMDLAGDM 240

Query: 251 NTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283
           +  E+ L  + E               +      V   F RI YD+A+
Sbjct: 241 DLAEDFLCFIVERVLERRRPELAVLERDVGKLEAVKKPFPRIRYDEAV 288


>gi|327334150|gb|EGE75864.1| lysine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 1081

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|320540120|ref|ZP_08039775.1| lysine tRNA synthetase, constitutive [Serratia symbiotica str.
           Tucson]
 gi|320029786|gb|EFW11810.1| lysine tRNA synthetase, constitutive [Serratia symbiotica str.
           Tucson]
          Length = 505

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 23/291 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V ++G +   R  G   F+ ++D  G  Q+    D    ++      +W L   G 
Sbjct: 64  LGVDVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDELAADVYNEQFKKWDL---GD 120

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +
Sbjct: 121 IIGARGKLFKTK--TGELSVHCVELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
              +N  K R++I+ SMR  M+   F+E  TP++    P GA  R F+          Y 
Sbjct: 178 EGSRNTFKVRSQIMASMRNFMVERGFMEVETPMMQVI-PGGASARPFITHHNALDIDMY- 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ + +D++   
Sbjct: 236 LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYNDLIELT 294

Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDL 293
           E++ R + E+    + V            F ++   +AI++Y   TD  DL
Sbjct: 295 ESLFRTLAEKVLGTSLVQYGDEVFDFGKPFEKLSMTEAIKKYRPETDLADL 345



 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-R 527
           NDL      +++    G EI +G    + +E   Q F++   +K+  ++    +   Y  
Sbjct: 404 NDLNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFADQMNAKDAGDDEAMFYDEDYVT 463

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|306831775|ref|ZP_07464931.1| asparagine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304425973|gb|EFM29089.1| asparagine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 448

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 115/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+          +  F   K +
Sbjct: 15  VGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKFGEEEGTEKFNTIKHL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + I G+V   S             EL    +EI+  +E+ P+     +E+     
Sbjct: 75  NQETSILITGIVKEDSRSKFG-------YELDVTDLEIVGHSEDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDHRHLWLRSRKQMAIMQVRNAIIYASYEFFDKNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAI 295


>gi|225405476|ref|ZP_03760665.1| hypothetical protein CLOSTASPAR_04696 [Clostridium asparagiforme
           DSM 15981]
 gi|225042998|gb|EEG53244.1| hypothetical protein CLOSTASPAR_04696 [Clostridium asparagiforme
           DSM 15981]
          Length = 485

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 24/251 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  VR++G +H +R  G + F+ +R   G+ Q V       F+I + ++ E  + + G V
Sbjct: 67  GREVRVNGAIHTIRSMGEVAFVVLRKAGGLVQCVYEEGLTNFDI-RDLKEESAVEVTGTV 125

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRD 136
                         G  E+  +++ +LS     PLP+   + +   S+  K   L LR  
Sbjct: 126 KREER-------APGGFEIRLKELRVLS-KPAAPLPIAVSKWKLNTSLETK---LALRPV 174

Query: 137 TLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           +L +N+ +R +      I+   R  ++ + F E  TP + A   EG  +        + +
Sbjct: 175 SL-RNLRERAKFKIQEGIVRGFRDYLLGQGFTEIRTPKIVARGAEGGSNVFKLDYFGKKA 233

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDI 249
              L Q+PQ YKQ  M   +DR F+ AP FR E   + R   E+  LD EM +++  +DI
Sbjct: 234 --ELGQSPQFYKQT-MVGVYDRVFEAAPVFRAEKHNTTRHLNEYTSLDFEMGYIDGFEDI 290

Query: 250 LNTMENVLRGV 260
           ++    +L+ V
Sbjct: 291 MDMETGMLQFV 301



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G E+ +GG R H    +L+     G+  E + +        F+ GMPPHGG
Sbjct: 397 TLSFDLLFKGLEVTTGGQRIHDYGEILRKMEKRGMDPEDIASYL----MIFKYGMPPHGG 452

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M LL  +NVRE +LFP
Sbjct: 453 LGIGLERLTMRLLDEQNVRETALFP 477


>gi|71006800|ref|XP_758056.1| hypothetical protein UM01909.1 [Ustilago maydis 521]
 gi|46097557|gb|EAK82790.1| hypothetical protein UM01909.1 [Ustilago maydis 521]
          Length = 1135

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 7/149 (4%)

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
           PV  +R     +R   R +DLR  T          I N+ R  +   +F+E  TP L   
Sbjct: 446 PVITQR-----VRLTNRIIDLRTPTAQAIFRINAAICNNFRSHLDKNHFLEIHTPKLQGG 500

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + E      +     + +F A  Q+PQ +KQ+ +A+ F R ++I P FR E+  + R   
Sbjct: 501 ASESGSSVFMLDYFGRPAFLA--QSPQLFKQMCIAADFKRVYEIGPVFRAENSNTARHLT 558

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           E+  LD+EM  V   D +  ++ +L+ +F
Sbjct: 559 EYTGLDIEMEIVHYYDAIRVIDGMLKSIF 587



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 19/140 (13%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI +GG R H  E + +    + IS + ++    G    F+ G PPH G   
Sbjct: 695 FDIFIRGQEICTGGQRIHDIEELERKMHRLSISSKGMQEYLEG----FRLGAPPHAGCGI 750

Query: 542 GIDRIVMLLLGAKNVREVSLF-------PMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G++R+VML L   +VR  +LF       P+ +N  D L    ++ +    +        +
Sbjct: 751 GLERLVMLYLNLGDVRYGTLFHRDPRSLPLQKNDVDELRHPEASTNPPPWK--------H 802

Query: 595 PKKILKISVTTILRNVYGLK 614
           P+  LK    + LR++  L+
Sbjct: 803 PRLALKADAESELRDLQPLE 822


>gi|146420576|ref|XP_001486243.1| hypothetical protein PGUG_01914 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 432

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 25/251 (9%)

Query: 36  IIFLDIRDHYGITQVVANPD-----SACFEIAKSVRSEWVLCIDGLVMSRSAETINANII 90
           + FL +R    + Q +   D         + A S+  E ++ + G V        +A + 
Sbjct: 1   MAFLTLRQQSELIQCLIKADGEQVLKQMVKFAGSINLESIVVVHGEVRKVEEPIKSATVQ 60

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGE---REYPES-----------IRFKYRFLDLRRD 136
             +I +S  KI ++S A E  LP+  E   R   E+            R   R +DLR  
Sbjct: 61  DAEIHVS--KIYVISAAPE-QLPILIEDASRSDAEAEAAGLPVVNLDTRLDARVIDLRTT 117

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T       +  +    R  +  + F+E  TP L  ++ EG  +    +     ++ A  Q
Sbjct: 118 TNQAIFKIQAGVGKLFREFLDKKGFVEIHTPKLLGAATEGGANVFEVTYFKSLAYLA--Q 175

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMEN 255
           +PQ YKQ L+A+ F++ +++AP FR E+  + R   EF  +D+EM+F E   ++L+ + +
Sbjct: 176 SPQFYKQQLIAADFEKVYEVAPVFRAENSNTHRHMTEFMGMDLEMTFEEHYHEVLDNLAD 235

Query: 256 VLRGVFEEFSN 266
           +   +F E  +
Sbjct: 236 LFVYIFSELKS 246



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H  E++ +   ++ I              AF  G PPH G   
Sbjct: 345 YDFFMRGEEIMSGAQRIHDPELLKKRMIDLDIDPNA--PGLSDYIDAFTYGCPPHAGGGI 402

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++M  L  KN+R  SLFP
Sbjct: 403 GLERVLMFYLDLKNIRRASLFP 424


>gi|281206115|gb|EFA80304.1| aspartyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 566

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 54/294 (18%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74
           G  V +   VH     G + F+ +RD     Q V   A       + A ++  E ++ ++
Sbjct: 93  GEKVLVRARVHLATATGSLAFMVLRDAMHTIQAVLSAAGNGKPMVKFAGAIPKESIVDME 152

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-------------------- 114
             V++ + E IN       +EL    + I+S A++LPL +                    
Sbjct: 153 ATVIT-TKEPIN-RCTQKDVELQVLSLFIVSEAQQLPLQLEDLARPTHELEQQKKTIEEL 210

Query: 115 --------FGERE-------------YPESI---RFKYRFLDLRRDTLHKNIVKRTRIIN 150
                     E E             Y E +   R   R LDLR  + H+ I +    + 
Sbjct: 211 DEKLKSLTLSEAERSDLEKKKGEANKYAEVLLDTRLNNRVLDLRVPS-HQAIFRLQSAVG 269

Query: 151 SM-RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
            + R  + + NF+E  TP + +S+ E           +  ++  L Q+PQ YKQ+ + S 
Sbjct: 270 MLFREYLHSNNFVEIHTPKMISSASESGASVFKLGYFDTNAY--LAQSPQFYKQMAICSD 327

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
            +R ++I P FR E+  + R   EF  LD+EMSF E   ++L+ ++N++  +FE
Sbjct: 328 MERVYEIGPVFRAENSFTHRHLTEFVGLDIEMSFREHYHEVLDVLDNLMCSIFE 381



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 13/105 (12%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +TMP         N+LL   A  YDL   G EI SG  R H ++++ ++ +  GI+   +
Sbjct: 467 YTMPD------PNNELL---ANAYDLFMRGEEICSGAQRIHDAKMLEESAAKHGINIPSI 517

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +        AF+ G  PH G   G++R+VML LG  N+R+ S+FP
Sbjct: 518 Q----AYIDAFKYGAAPHAGGGVGLERVVMLYLGIGNIRKTSMFP 558


>gi|50843089|ref|YP_056316.1| lysyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|50840691|gb|AAT83358.1| lysyl-tRNA synthetase [Propionibacterium acnes KPA171202]
          Length = 1120

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 665 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 724

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 725 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 778

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 779 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 838

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 839 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 896

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 897 DYVQMRHLTREMILSAARNATGGT 920



 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1079 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1114


>gi|332676013|gb|AEE72829.1| lysylphosphatidylglycerol biosynthesis bifunctional protein LysX
           [Propionibacterium acnes 266]
          Length = 1120

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 665 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 724

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 725 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 778

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 779 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 838

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 839 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 896

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 897 DYVQMRHLTREMILSAARNATGGT 920



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1079 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1114


>gi|327457844|gb|EGF04499.1| lysyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
          Length = 1081

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   +  ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARGQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|215489478|ref|YP_002331909.1| lysyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|215267550|emb|CAS12004.1| lysine tRNA synthetase, inducible [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 505

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 131/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG + +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGALSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|291238448|ref|XP_002739141.1| PREDICTED: lysyl-tRNA synthetase-like [Saccoglossus kowalevskii]
          Length = 614

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 20/248 (8%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           V ++G VH  R  G  +IF D+R      Q++AN      +   FEI + +R   ++ + 
Sbjct: 144 VTVAGRVHAKRLSGAKLIFYDLRAEGVKLQIMANARFFASEDEFFEINERIRRGDIIGVK 203

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +    ++ILS     LP   FG ++  +  RF+ R+LDL
Sbjct: 204 G---------NPGKTKKGELSIMPTHMQILSPCLHMLPHLHFGLKD--KETRFRQRYLDL 252

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
              DT+ +  V R RI+N +R  +    F+E  TP++   +        V    +     
Sbjct: 253 IINDTVRQKFVTRARIVNYVRKYLDELGFLEVETPMMNMIAGGATAKPFVTHHNDLDMDL 312

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++  
Sbjct: 313 FMRVAPELYHKMLVVGGIDRVYEIGRQFRNESIDLTHNP-EFTTCEFYMAYADYNDLMEM 371

Query: 253 MENVLRGV 260
            E+++ G+
Sbjct: 372 TESLIAGM 379



 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           V N + E+    ++  M E+   A +      + V++   G   A + G+PP GG   GI
Sbjct: 511 VVNAYTELNDPAVQRKMFELQADAKAAGDDEAQGVDD---GFCTALEYGLPPTGGWGMGI 567

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           DR+ M L  + N++EV  FP
Sbjct: 568 DRLTMFLTDSNNIKEVLFFP 587


>gi|56707357|ref|YP_169253.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110669827|ref|YP_666384.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|254370939|ref|ZP_04986944.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874191|ref|ZP_05246901.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56603849|emb|CAG44825.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320160|emb|CAL08208.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569182|gb|EDN34836.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254840190|gb|EET18626.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
          Length = 576

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 33/310 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV       PD   
Sbjct: 122 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 180

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +E  K+      LC  G ++  +      N  TG++ + A   EIL+ A   PLP     
Sbjct: 181 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 231

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
              + +R++ R++DL  +   + + K R++++N +R      +F+E  TP++      GA
Sbjct: 232 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVNFIRNYFDRLDFMEVETPMMHVLQGGGA 291

Query: 178 RDFLVPSRVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                P + +  +      L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF
Sbjct: 292 AK---PFKTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EF 347

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRR 285
             L+  M++ + +D+++  E++L  + +E      +            + RI   D+I +
Sbjct: 348 TMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVK 407

Query: 286 YGTD--KPDL 293
           Y  D  K DL
Sbjct: 408 YNDDITKEDL 417



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VM L  ++++R+V LFP
Sbjct: 535 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 571


>gi|302418328|ref|XP_003006995.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261354597|gb|EEY17025.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 730

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 119/252 (47%), Gaps = 16/252 (6%)

Query: 17  VGSFVRLSGWVH-RVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAKSVRSEWVLCID 74
           V S V     +H + R    + FL  RD  + I  V+++        A+ +  E ++ + 
Sbjct: 138 VDSVVTFRARIHTQRRMSKHLDFLLFRDQTHTIQGVLSHTHPNMVRWAQHLNPESIVQVT 197

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLD 132
           G  + +  + + +   +G +E+S   + ++S A +L    F   + P ++  R + R LD
Sbjct: 198 G-TLQKPVQHVRSATHSG-VEISIDTMYLVSPAHDL---AFSNYKAPSTMHRRLEARVLD 252

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR          R  I  + R  +  +NF+E  TP L  ++ E        +   + +F 
Sbjct: 253 LRHPANQALFRVRHTITRTFRESLEKQNFMEMHTPKLQPAATESGASVFKVNYFGRRAFL 312

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD---I 249
           A  Q+PQ  KQ+ +++ F R ++I P FR E+  + R   E+  LD+EM+   QDD   +
Sbjct: 313 A--QSPQLAKQMAISADFGRVYEIGPVFRAENSNTHRHLTEYTGLDLEMTI--QDDYHEL 368

Query: 250 LNTMENVLRGVF 261
           +  ++ VL+ +F
Sbjct: 369 IKILDCVLKDIF 380


>gi|66823903|ref|XP_645306.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|75009089|sp|Q75JQ1|SYDC1_DICDI RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic 1; AltName:
           Full=Aspartate--tRNA ligase 1; Short=AspRS 1
 gi|60473324|gb|EAL71270.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 576

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 83/141 (58%), Gaps = 9/141 (6%)

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFLV 182
           R   R LDLR    H++I + ++ +    R +++ E FIE  +P I++A+S  GA  F  
Sbjct: 252 RLDNRALDLRVPA-HQSIFRLQSGVCTLFREQLLGEGFIEIHSPKIISAASESGASVF-- 308

Query: 183 PSRVNQGSFYA-LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
             ++N  + +A L Q+PQ YKQ+ + + F++ F+I P FR E+  + R   EF  LD+EM
Sbjct: 309 --KLNYFNTHAYLAQSPQLYKQMAICADFNKVFEIGPVFRAENSNTHRHLTEFVGLDLEM 366

Query: 242 SFVEQ-DDILNTMENVLRGVF 261
           +F +   + L+T++ ++  +F
Sbjct: 367 TFKDHYHEALDTLDRLMTSIF 387



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL   G EI SG  R H  E++ ++  + G+  E ++    G   +F+ G   H G   
Sbjct: 491 YDLFMRGEEICSGAQRIHDPELLEKSAKSHGVVIEDIQ----GYIDSFKYGCSQHAGGGV 546

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S  P
Sbjct: 547 GLERVVMLYLGLGNIRKASFCP 568


>gi|99034277|ref|ZP_01314329.1| hypothetical protein Wendoof_01000870 [Wolbachia endosymbiont of
          Drosophila willistoni TSC#14030-0811.24]
          Length = 94

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/73 (45%), Positives = 50/73 (68%)

Query: 1  MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
          M+ Y+TH+C +L  +DV   V LSGW++R R HG +IF+D+RD YGITQ+V N D   F+
Sbjct: 22 MNCYKTHTCEELRKNDVEKEVTLSGWLYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFD 81

Query: 61 IAKSVRSEWVLCI 73
             +++ E V+ +
Sbjct: 82 EISNLKLESVITV 94


>gi|24214695|ref|NP_712176.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|39932210|sp|Q8F4P5|SYK_LEPIN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|24195684|gb|AAN49194.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 495

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 24/280 (8%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVM 78
           +L G +H  R  G   F  ++D+ GI Q+ A  D      + I KS+    ++ ++G + 
Sbjct: 55  KLGGRLHSKRVMGKASFAHLKDNSGIIQLYATKDDLGETQYSIFKSLDLGDIIGLEGYLF 114

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
                 I  ++ +  +EL A+ I  L V +E    V+      E  R++ R++DL   D 
Sbjct: 115 KTQKGEITLHVTS--VELLAKCIRPLPVVKEKDGVVYDAFADVEQ-RYRMRYVDLIVNDH 171

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
           +    + R++I++ +R  +  E F+E  TP++   +    AR F+          + L  
Sbjct: 172 VRDTFITRSKIVSEIRSFLTQEGFLEVETPMMQPIAGGAAARPFVTHHNTLDMQLF-LRI 230

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  G DR F++   FR+E   +   P EF  ++  M+F +   +L+  E +
Sbjct: 231 APELYLKRLIVGGMDRVFELNRNFRNEGISTKHNP-EFTMMEAYMAFGDMSTMLDLTERL 289

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +  + +             +IC    I +YG D  DL  P
Sbjct: 290 ITHLAQ-------------KICGTLKI-QYGKDLIDLSPP 315



 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP GG+  GIDR+VMLL  + ++R+  LFP+
Sbjct: 454 RALEYGMPPTGGLGIGIDRLVMLLTNSHSIRDTILFPL 491


>gi|292900473|ref|YP_003539842.1| lysyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291200321|emb|CBJ47449.1| lysyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|312171252|emb|CBX79511.1| lysyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 506

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 27/294 (9%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           ++G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L   G
Sbjct: 63  ELGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL---G 119

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  
Sbjct: 120 DILGARGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIA 176

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFY 192
           +   +N  K R++I+  +R  M+  +F+E  TP++ A  P GA  R F+          Y
Sbjct: 177 NDDSRNTFKVRSQIMAGIRNFMVGRDFMEVETPMMQAI-PGGASARPFITHHNALDLDMY 235

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            L  AP+ Y + L+  GFDR F+I   FR+E   PR +    EF  +++ M++ + +D++
Sbjct: 236 -LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHN---PEFTMMELYMAYADYEDLI 291

Query: 251 NTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDL 293
              E++ R + +       V            F ++   +AI +Y   TD  DL
Sbjct: 292 ELTESLFRTLAQNVLGSTLVPYGDQQFDFGQPFAKLTMKEAILKYRPQTDLADL 345



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|291302345|ref|YP_003513623.1| Aspartate--tRNA ligase [Stackebrandtia nassauensis DSM 44728]
 gi|290571565|gb|ADD44530.1| Aspartate--tRNA ligase [Stackebrandtia nassauensis DSM 44728]
          Length = 447

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 109/252 (43%), Gaps = 25/252 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG+ +R++GW+HR R    + F  +RD  G+ QVV +      E+A++   E    ++  
Sbjct: 28  VGARIRIAGWLHRRRLLKSVAFAIVRDRSGLAQVVVSE-----EVARARLEE----LNEE 78

Query: 77  VMSRSAETINAN-IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL---- 131
            +     T+ AN    G +EL    I +L  AE  P  +     Y  S+R     L    
Sbjct: 79  TVVEVTGTVVANPAAPGGVELVEPVITVLGEAEAPPFDL-----YRPSLRATLPTLLDRA 133

Query: 132 --DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
              LR           +      R  + A +F E  TP + AS+ E   +        + 
Sbjct: 134 PVSLRHPRRKAAFELASAATMGFRETVAAMDFTEIFTPKIVASATESGANVFAIDYFGRP 193

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
            + A  Q+PQ YKQ  M   F+R F++ P FR E   + R   E+  LD+E  F+E   D
Sbjct: 194 GYLA--QSPQFYKQ-TMVGVFERVFEVGPVFRAEPHDTVRHLAEYTSLDVEFGFIESYRD 250

Query: 249 ILNTMENVLRGV 260
           +   +  V+ G+
Sbjct: 251 VAEVLREVVAGM 262



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 4/83 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +DL+  G E+ +GG R H     L A +  G S E     + G   AF+ GMPPHGG A
Sbjct: 361 SFDLLFRGTEMVTGGRRLHRYADYLAAIAAQGGSPEP----YAGYLEAFKHGMPPHGGFA 416

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            G++R V  L G  N+REV+LFP
Sbjct: 417 IGLERFVAQLTGVANIREVTLFP 439


>gi|292487147|ref|YP_003530017.1| lysyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|291552564|emb|CBA19609.1| lysyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 506

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 27/294 (9%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           ++G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L   G
Sbjct: 63  ELGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL---G 119

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  
Sbjct: 120 DILGARGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIA 176

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFY 192
           +   +N  K R++I+  +R  M+  +F+E  TP++ A  P GA  R F+          Y
Sbjct: 177 NDDSRNTFKVRSQIMAGIRNFMVGRDFMEVETPMMQAI-PGGASARPFITHHNALDLDMY 235

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            L  AP+ Y + L+  GFDR F+I   FR+E   PR +    EF  +++ M++ + +D++
Sbjct: 236 -LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHN---PEFTMMELYMAYADYEDLI 291

Query: 251 NTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDL 293
              E++ R + +       V            F ++   +AI +Y   TD  DL
Sbjct: 292 ELTESLFRTLAQNVLGSTLVPYGDQQFDFGQPFAKLTMKEAILKYRPQTDLADL 345



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|71020373|ref|XP_760417.1| hypothetical protein UM04270.1 [Ustilago maydis 521]
 gi|46100086|gb|EAK85319.1| hypothetical protein UM04270.1 [Ustilago maydis 521]
          Length = 562

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 122/275 (44%), Gaps = 42/275 (15%)

Query: 18  GSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQ--VVANPDSACFEIAK---SVRSEWVL 71
           G  + LS  V   R P   ++FL  R      Q  +   P+    ++ K    + +E ++
Sbjct: 108 GEHIVLSARVQTSRAPSAKLVFLTFRQGVDCVQATLAQTPEKVSRQMTKWAAGLAAETIV 167

Query: 72  CIDGLVMSRSAETINANIIT-GQIELSAQKIEILS--VAEELPLPV-------------- 114
            ++G ++ ++ + + +N +T    E+   KI   S    E+LP  V              
Sbjct: 168 LVEGTIV-KTPKPVESNTVTVKDAEIKISKIHSTSEIAFEQLPFGVDDATRSEVEIQASQ 226

Query: 115 FGEREYPE---SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-----NFIECST 166
             +R  P      R   R LDLR  T ++ I + T  +    C++  E     +F+E  T
Sbjct: 227 QTDRPLPPIALDTRLDNRVLDLRT-TTNQAIFRLTHGV----CKLFREYLDSLDFVEIHT 281

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P L  ++ E        S     +F A  Q+PQ  KQ+ +A+ F R ++I P FR ED  
Sbjct: 282 PKLQGAATESGSSVFKVSYFKGQAFLA--QSPQLAKQMAIAADFGRVYEIGPVFRAEDSN 339

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF  LD+EM+F   D+  + + +VL G+F
Sbjct: 340 THRHMTEFTGLDLEMAF---DEHYHEVVDVLDGLF 371



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 4/89 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H +  + +  +  GI  E +++       AF+ G PPH G   
Sbjct: 477 YDFFMRGQEILSGAQRVHDAAFLEKRMAEFGIPVESMKH----YVEAFRLGCPPHAGGGI 532

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G++R+VM  LG  N+R  S+FP      D
Sbjct: 533 GLERVVMFYLGLGNIRRASMFPRDPKRLD 561


>gi|307261289|ref|ZP_07542964.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|306869020|gb|EFN00822.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
          Length = 500

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 19/278 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  I+D  G  Q+ A  D+    +     S W L   G ++  
Sbjct: 64  VKVAGRIMLKRVMGKASFFTIQDVSGQIQLYAARDNLAEGVYADKVSMWDL---GDIVGV 120

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
           +         TG++ +   ++E+L+ +   PLP   +    +  R++ R+LDL   +   
Sbjct: 121 AGTLFKTK--TGELTVRCSEVELLTKSLR-PLPNKVQGLTDQETRYRQRYLDLISNEESR 177

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  + R+++++ +R   + ++FIE  TP+L        A+ F+          Y L  AP
Sbjct: 178 RTFMIRSKVVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMY-LRIAP 236

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F++   FR+E       P EF  ++   ++ +  D+++  E +LR
Sbjct: 237 ELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELLR 295

Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
            +  +     TV            F RI   DAI +YG
Sbjct: 296 KLAIDILGTTTVPYGEYVFDFGKPFERITMHDAIVKYG 333



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M+   A ++R+V LFP
Sbjct: 460 ALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILFP 495


>gi|314982014|gb|EFT26107.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315090829|gb|EFT62805.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
          Length = 1081

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 117/264 (44%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   DS   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDSMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HT-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  + +    +  R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSACDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|239626630|ref|ZP_04669661.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239516776|gb|EEQ56642.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 647

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 134/289 (46%), Gaps = 38/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCID 74
           G    ++G +   R  G   F +I+D  G  QV    DS   E  K  +      V+ + 
Sbjct: 59  GKEAAIAGRMMFKRVMGKASFCNIQDLKGNIQVYVARDSVGEEPYKDFKKMDIGDVVGVR 118

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
           G V +           TG+I + A ++ +LS + + LP    G  +    +R++ R++DL
Sbjct: 119 GTVFTTK---------TGEISIHATEVTLLSKSLQVLPEKFHGLTDT--DMRYRQRYVDL 167

Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   K+  +KR+RI+ ++R  +  E F+E  TP+L A++   A      +R  +  F 
Sbjct: 168 IMNAEVKDTFIKRSRILAAIRKYLGGEGFMEVETPMLVANAGGAA------ARPFETHFN 221

Query: 193 ALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           AL +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + 
Sbjct: 222 ALDEDLKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDY 280

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
             +++  EN+ R V +E     T++ N         F RI   DA+++Y
Sbjct: 281 HGMMDLTENLYRFVAQEVLGTTTITYNGIQMDLGRPFERITMVDAVKKY 329



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 26/41 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+ MLL  +  +R+V LFP  +  
Sbjct: 456 ALEVGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFPTMKTL 496


>gi|149448248|ref|XP_001511312.1| PREDICTED: similar to Asparaginyl-tRNA synthetase 2, mitochondrial
           (putative), partial [Ornithorhynchus anatinus]
          Length = 545

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 119/286 (41%), Gaps = 37/286 (12%)

Query: 10  GDLGVSDVGSFVRLS--GWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAK 63
           G  G  D G   RLS  GWV  VR    I+FL + D   +   QVVA+   D+A      
Sbjct: 30  GAFGAWDPGG-ERLSPQGWVRSVRSQKDILFLHVNDGSSLESLQVVADSSLDTADLTFGS 88

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +V       + G ++    +  N       +EL+A+KI ++        P+  +  +P  
Sbjct: 89  AVE------VQGRLVRSPHKKQN-------VELTAEKIRVVGHCNPTEFPLKTKERHPLE 135

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL-- 181
              ++  L  R +TL   +  R     ++        ++   TP++T++  EGA +    
Sbjct: 136 YLRQHPHLRCRSNTLGALLRVRGEATAAVHSFFKEHGYVHIHTPVITSNDCEGAGELFQV 195

Query: 182 ---VPSRVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
               P+R     F+ +P       QL   +M+  F   F   P FR E+ +S R   EFY
Sbjct: 196 EPSSPAREPGSLFFDVPAFLTVSGQLHLEVMSGAFTHVFTFGPTFRAENSQSRRHLAEFY 255

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
            ++ E++F E    L  +  V+ G+F+        +   L  C DD
Sbjct: 256 MVEAEVAFTES---LQDITQVMEGLFK------ATTATVLARCPDD 292


>gi|125810817|ref|XP_001361642.1| GA17710 [Drosophila pseudoobscura pseudoobscura]
 gi|54636818|gb|EAL26221.1| GA17710 [Drosophila pseudoobscura pseudoobscura]
          Length = 530

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 36/263 (13%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G VH  R  G   FL +R      Q        C      + S+ ++   G +   S   
Sbjct: 93  GRVHTSRSKGKQCFLILRQQSSTVQ--------CILAVGDIISKQMVKFAGNIPKESIID 144

Query: 85  INANIIT----------GQIELSAQKIEILSVAE-ELPLPVFGEREYPES---------- 123
           I A  ++            +EL  ++I ++S A+ +LPL +  +   PE+          
Sbjct: 145 IQAKPVSVPNKIESCTEQTLELCVEQIFVISQAKAQLPLQI-EDASRPENADDDGLNIRV 203

Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   R LDLR             +    R  +  + F E  TP + +++ EG  + 
Sbjct: 204 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAASEGGANV 263

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S     ++  L Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF  LD+E
Sbjct: 264 FTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLE 321

Query: 241 MSF-VEQDDILNTMENVLRGVFE 262
           M+F     ++L+T+ N    +F+
Sbjct: 322 MAFKYHYHEVLHTIGNTFTAIFK 344



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++   + GI       +      +F+ G PPH G   
Sbjct: 445 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDT----TKIAAYIESFRYGCPPHAGGGI 500

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 501 GMERVVMLYLGLDNIRKTSMFP 522


>gi|328758223|gb|EGF71839.1| lysyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
          Length = 1081

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 116/264 (43%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L    +       + N  +    +E+++ ++   S+    PLP           + 
Sbjct: 686 HAVSLGDHFVATGTVGASRNGTL---SLEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|330801430|ref|XP_003288730.1| lysine-tRNA ligase [Dictyostelium purpureum]
 gi|325081206|gb|EGC34730.1| lysine-tRNA ligase [Dictyostelium purpureum]
          Length = 591

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 21/255 (8%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G V   R  G G++F D+   +   QV+ N       +  S   E+   ++GL+  
Sbjct: 121 VSIAGRVLSKRAAGSGLVFYDLSGEFNKVQVLVNK-----RLYASGEDEYTK-VNGLL-- 172

Query: 80  RSAETINA-----NIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           R  + I A        TG++ L A ++ +LS    + LP    +      RF+ R+LD+ 
Sbjct: 173 RRGDIIGAIGTAGRSKTGELSLFATEVILLSPCLHM-LPKPNNQLVDLETRFRQRYLDMI 231

Query: 135 -RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSF 191
             +++ KN + R+++I  +R  +   NF+E  TP++   +    A+ F    + +N   F
Sbjct: 232 CNESVKKNFIIRSKVIQGVRKYLDNLNFVEVETPMMNMIAGGAAAKPFTTHHNALNLDLF 291

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +  AP+ Y + L+  G DR ++I   FR+ED      P EF   +  M++ + +DI+ 
Sbjct: 292 MRI--APELYLKQLVVGGMDRVYEIGKQFRNEDIDHTHNP-EFTTCEYYMAYADYNDIMR 348

Query: 252 TMENVLRGVFEEFSN 266
             E +++G+  +  N
Sbjct: 349 MTEELIQGIVMDIHN 363



 Score = 44.3 bits (103), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR VML+    N++EV LFP
Sbjct: 529 SLEYGLPPTGGFGLGIDRFVMLMSNTYNIKEVILFP 564


>gi|323491012|ref|ZP_08096206.1| lysyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323395368|gb|EGA88220.1| lysyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 494

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 33/279 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77
           V ++G V   R  G   F  I+D  G  Q+    D+     +E   +V    +L I G V
Sbjct: 59  VVIAGRVMTKRGKGKAGFAHIQDLKGQIQIYVRKDAIGDEAYEFYNTVDLGDILGIKGTV 118

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RR 135
              +          G++ + A+++E L+ A   LP    G ++  +  R++ R+LDL   
Sbjct: 119 FKTN---------VGELSIKAKEVEFLTKALRPLPEKFHGLKDVEQ--RYRQRYLDLLTS 167

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
           +   +  + R+RII SMR  +  E F+E  TP+L + +    A+ F+          Y +
Sbjct: 168 EESKETFILRSRIIQSMRRYLDNEGFLEVETPMLHSIAGGAAAKPFITHHNALDMELY-I 226

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G ++ ++I   FR+E   +   P EF  L++  ++ + +DI+   E
Sbjct: 227 RIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP-EFTMLELYEAYADYNDIMALTE 285

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           N++  + +E     TV              +YG D+ DL
Sbjct: 286 NLVAHIAQEVLGTTTV--------------QYGEDQIDL 310



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR++MLL  + ++R+V LFP
Sbjct: 453 ALEYGLPPTGGLGIGIDRLIMLLTNSSSIRDVLLFP 488


>gi|148826181|ref|YP_001290934.1| lysyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229559858|sp|A5UCQ0|SYK_HAEIE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|148716341|gb|ABQ98551.1| lysyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 502

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 29/293 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69
           + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    +       W    
Sbjct: 57  LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGD 116

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           ++ + G +             T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 117 IIGVKGTLFKTK---------TNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186
           +LDL   +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+     
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNA 225

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  AP+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ + 
Sbjct: 226 LDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADY 283

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
            D+++  E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 284 HDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATVKYGADK 336



 Score = 40.8 bits (94), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|52425598|ref|YP_088735.1| lysyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81386871|sp|Q65SB0|SYK_MANSM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|52307650|gb|AAU38150.1| LysU protein [Mannheimia succiniciproducens MBEL55E]
          Length = 503

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 122/285 (42%), Gaps = 27/285 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKSVRSEWVLCIDGL 76
           V ++G +   R  G   F+ I+D  G  Q+       P+    E  KS     ++ I G 
Sbjct: 64  VAVAGRIMTRRTMGKATFITIQDMSGKIQLYVARDNLPEGVYGEDVKSWDLGDIVGIKGT 123

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           +             T ++ + A ++++L+ A   PLP        +  R++ R+LDL   
Sbjct: 124 LFKTK---------TNELTVKAHEVQLLTKALR-PLPDKFHGLSDQETRYRQRYLDLISN 173

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
           +   +  V R+++I  +R   I + FIE  TP+L        AR F+          Y L
Sbjct: 174 EESRRTFVIRSKVIAGIREYFIGKGFIEVETPMLQVIPGGAAARPFVTHHNALDIDMY-L 232

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+R F++   FR+E       P EF  ++   ++ +  D+++  E
Sbjct: 233 RIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTE 291

Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDK 290
            +LR +  +      V            F RI   DA+ +YG +K
Sbjct: 292 ELLRKLALDILGTTIVPYGEYEFDFGKPFERITMHDAVIKYGAEK 336



 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536
           +++L   G EI +G    + +E   + F     +K+  ++    +      A + G+PP 
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQAERFDAQVAAKDAGDDEAMFKDDDFVTALEHGLPPT 470

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+ ML   A ++R+V LFP
Sbjct: 471 AGEGLGIDRLAMLFANAPSIRDVILFP 497


>gi|297171211|gb|ADI22219.1| lysyl-tRNA synthetase (class II) [uncultured Gemmatimonadales
           bacterium HF0200_34B24]
 gi|297171326|gb|ADI22331.1| lysyl-tRNA synthetase (class II) [uncultured actinobacterium
           HF0500_01C15]
          Length = 512

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 130/300 (43%), Gaps = 30/300 (10%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           + S G L     G+  RL G V   R  G  +F  + D  G  QV    D    E  +++
Sbjct: 50  SESTGSLSDKGYGNVERLGGRVVSWRDMGKSLFAHLEDGQGRVQVYFRKDVLGDEEYEAL 109

Query: 66  R----SEWVLCIDGLVMSRSAE-TINAN---IIT--------GQIELSAQKIEILSVAEE 109
                 +W+     +  +RS E TI A    ++T        G++E  AQ        + 
Sbjct: 110 DLLDLGDWIGTEGNMFRTRSGEVTIRAKSWKLLTKSLRPLPFGKVETDAQ------TGQR 163

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPI 168
           +    F ++E    +R++ R+ DL  +   + + + R+R+I S+R  + ++ F+E  TP+
Sbjct: 164 VVHSGFADQE----MRYRQRYADLAVNPEVREVFRLRSRVITSLRGFLDSQGFLEVETPV 219

Query: 169 LTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L        A+ F+        + Y L  A + Y + L+  G DR ++I+  FR+E    
Sbjct: 220 LQPLYGGAAAKPFVTEHNALSQTMY-LRVADELYLKRLIVGGLDRVYEISKDFRNEGLSR 278

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
              P EF  L+   +F + D  +  +E +L+ V +E   G +V      I +D    R G
Sbjct: 279 YHNP-EFTMLEWYQAFTDYDSQMQLVEQMLQHVLDEVVGGRSVMLGETEINFDGRFDRLG 337



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP GG+  G+DR VM+L   +++R+V LFP+
Sbjct: 470 RALEYGMPPTGGVGMGVDRFVMVLANQQSIRDVILFPI 507


>gi|242006049|ref|XP_002423869.1| aspartyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212507103|gb|EEB11131.1| aspartyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 532

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 110/245 (44%), Gaps = 23/245 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSEWVLCI 73
           G  V++ G +   R  G   F+ +R   Y I   +   D    ++ K    +  E ++ +
Sbjct: 86  GVLVKVRGRLQTSRAKGKQCFIVLRQQQYTIQCFLCVNDVVSKQMVKFASVISKESIIDV 145

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL-------PVFGERE------ 119
           DG++ +  A+ I +      +EL  +++ ++S A+ +LPL       P+    +      
Sbjct: 146 DGVIQT-VAQKIES-CTQKDVELHVKELFVVSSAKSQLPLLIEDASRPIKSSEDNDALNI 203

Query: 120 -YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              +  +   R LDLR             +    R  + ++ F+E  TP + +++ EG  
Sbjct: 204 KVNQDTKLDNRVLDLRTPANQAIFKLEAGVCKLFRDILTSKGFVEIHTPKIISAASEGGA 263

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +    S     ++  L Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R   EF  LD
Sbjct: 264 NVFTVSYFKTSAY--LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVGLD 321

Query: 239 MEMSF 243
           +EM+F
Sbjct: 322 LEMAF 326



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H +E + +   + GI  +    +      AF+ G PPH G   
Sbjct: 447 YDMFMRGEEILSGAQRIHDAEFLCERALHHGIDLQ----KIKAYIDAFKYGCPPHAGGGI 502

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 503 GLERVVMLYLGLDNIRKTSMFP 524


>gi|197123222|ref|YP_002135173.1| asparaginyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196173071|gb|ACG74044.1| asparaginyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 434

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 114/286 (39%), Gaps = 32/286 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74
           G  + L GW+H  R  G + FL +RD  G  Q V    N     F+ +  +  E  L + 
Sbjct: 15  GKEITLHGWLHNRRSSGKLHFLQLRDGTGTIQCVVFKGNVTPEVFQASDHLPQETSLTVT 74

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           GLV       I         EL  + ++++S  A+E P+   G +E+  +   + R L L
Sbjct: 75  GLVKKDERSPIG-------FELDVRDLQVVSRPAQEFPI---GHKEHGVAFLMEQRHLWL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +  ++R       F     PI T S+ EG          + G  Y 
Sbjct: 125 RSQRQQVILRVRHTVEKAIRDFFDQRGFTLVDAPIFTPSACEGTSTLFEVPYFDLGKAY- 183

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E+++++ D  +  M
Sbjct: 184 LTQSGQLYME-AAAMALGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVAYMDLDGDMELM 242

Query: 254 ENVLRGVFE----------------EFSNGNTVSNNFLRICYDDAI 283
           E  +  V +                + S    V   F RI Y DA+
Sbjct: 243 EQFVSYVVQTALEKHRVELATVLERDVSLLEKVKPPFPRITYTDAV 288


>gi|26554296|ref|NP_758230.1| lysyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|39932207|sp|Q8EUS8|SYK_MYCPE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|26454305|dbj|BAC44634.1| lysyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 489

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 130/268 (48%), Gaps = 27/268 (10%)

Query: 5   RTHSCGD-------LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           RT + GD       L   +  + ++L+G V  +R   G+I    RD YG TQ   N    
Sbjct: 34  RTMTIGDFNSKFAKLKTHNTNNNIKLAGRVVALRQTFGVI----RDFYGDTQFYLNKK-- 87

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT--GQIELSAQKIEILSVAEELPLPVF 115
             +++KS+   +   +D   +    E   +   T  G++ L  +KI+I+S A + PLP  
Sbjct: 88  --KVSKSMLEYFNKVLD---LGDIVEIFGSPFRTQKGELTLDVKKIKIVSKALK-PLPEK 141

Query: 116 GEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                 E +R ++R++DL   +D++ K  V R RI+  +R  M ++N++E  TP+L    
Sbjct: 142 WHGLEDEELRARHRYVDLIVNKDSM-KVFVDRIRILKIIRQFMDSQNYLEVETPVLHPIL 200

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+      + +FY L  A +   + L+  GFD+ ++I   FR+E   S   P 
Sbjct: 201 GGANARPFITFHNTLERNFY-LRIATELPLKKLIVGGFDKVYEIGRIFRNEGMDSTHNP- 258

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGV 260
           EF  +++  ++   + ++   EN+ + V
Sbjct: 259 EFTSMEVYAAYENMEYMMRLTENLFKYV 286



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML     ++R+V LFP
Sbjct: 448 ALEYGLPPTAGLGVGIDRMIMLFTEKSSIRDVLLFP 483


>gi|227529905|ref|ZP_03959954.1| asparagine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227350159|gb|EEJ40450.1| asparagine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 432

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 19/246 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAK-SVRSEWVLC 72
           VG  V++  W+   R  G I FL +RD  G  Q +      D A F+ AK  +  E    
Sbjct: 13  VGETVKIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNDIDEAKFDSAKHDLHQETSFW 72

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G +                 E+  +  EI+S +E+ P+   G +E+       +R L 
Sbjct: 73  VTGEIAEDKRSKFG-------YEIHIKDFEIVSESEDYPI---GNKEHGIEFLLDHRHLW 122

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       +  R+R+  +         F +   PILT+S+PEG  +       +  ++ 
Sbjct: 123 LRSRKPWALMRIRSRVKLATMEFFDKHGFTQFDAPILTSSAPEGTTELFDVKYFDTDAY- 181

Query: 193 ALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
            L Q+ Q Y +   MA G  + + + P FR E  ++ R   EF+ ++ EM+++ QD+ L 
Sbjct: 182 -LSQSGQLYGEAGAMALG--KIYTMGPTFRAEKSKTRRHMTEFWMIEPEMAWMHQDESLK 238

Query: 252 TMENVL 257
             E  +
Sbjct: 239 IQEQYV 244


>gi|191165676|ref|ZP_03027516.1| lysyl-tRNA synthetase LysU [Escherichia coli B7A]
 gi|309796860|ref|ZP_07691262.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|190904371|gb|EDV64080.1| lysyl-tRNA synthetase LysU [Escherichia coli B7A]
 gi|308119501|gb|EFO56763.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7]
          Length = 505

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 18/219 (8%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   +  V R++I+
Sbjct: 133 TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKIL 191

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
            ++R  M+A  F+E  TP++    P GA  R F+          Y L  AP+ Y + L+ 
Sbjct: 192 AAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIAPELYLKRLVV 249

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R + +E    
Sbjct: 250 GGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGT 308

Query: 268 NTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
             V+           F ++   +AI++Y   TD  DL N
Sbjct: 309 TKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|170766869|ref|ZP_02901322.1| lysyl-tRNA synthetase LysU [Escherichia albertii TW07627]
 gi|170124307|gb|EDS93238.1| lysyl-tRNA synthetase LysU [Escherichia albertii TW07627]
          Length = 505

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           R + ++      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQDVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|323484764|ref|ZP_08090121.1| hypothetical protein HMPREF9474_01872 [Clostridium symbiosum
           WAL-14163]
 gi|323401870|gb|EGA94211.1| hypothetical protein HMPREF9474_01872 [Clostridium symbiosum
           WAL-14163]
          Length = 443

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G E+ +GG R H    +L      G+  E +++        F+ GMPPHGG+  
Sbjct: 358 FDLLFRGLEVTTGGQRIHDYRELLAKIEKRGMDTEGMDDYLN----TFKYGMPPHGGLGI 413

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ M LLG +NVREVSLFP
Sbjct: 414 GLERMTMQLLGEENVREVSLFP 435



 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 23/248 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L     G  V+++G V  +R  G I F+ +R   G+ Q V        E+++ ++ E  +
Sbjct: 19  LSYGKTGQEVKVNGAVMNIRNMGDIAFIILRKRDGVLQTVFEKGVTKAELSQ-LKEETFV 77

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G V                +EL    + ILS  E  P+P+    ++      + R L
Sbjct: 78  EVTGFVEPEERAPHG-------VELRLTGVRILSRPE-APVPI-AVSKWKMGASLEAR-L 127

Query: 132 DLRRDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           D+R  TL +N+ +R R      I  + R  +  E F E  TP + A   EG  +      
Sbjct: 128 DMRPLTL-RNVRERARFKIEEGIARAFREFLQGEGFTEIHTPKIGARGAEGGANVFKLDY 186

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ +   L Q+PQ YKQ+ M   FDR  +I P FR E   + R   E+  LD EM ++ 
Sbjct: 187 FHRPA--VLAQSPQFYKQM-MVGVFDRVMEIGPVFRAEKHNTKRHLNEYTGLDFEMGYI- 242

Query: 246 QDDILNTM 253
            DD  + M
Sbjct: 243 -DDFTDIM 249


>gi|113461151|ref|YP_719219.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|112823194|gb|ABI25283.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 496

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 134/296 (45%), Gaps = 37/296 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G I F+ ++D     Q+  + D   +A FE  K      ++ ++G V
Sbjct: 60  VAVTGRIMTKRFMGKIAFITLKDGDSSIQLYISQDIVSNAEFEKFKKWDIGDIVGVEGAV 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +         T ++ ++ +K  +L+ A   PLP        + +R++ R++DL  + 
Sbjct: 120 FKTN---------TDELSINTKKARLLTKALR-PLPDKFHGLSDQEMRYRQRYVDLIVNE 169

Query: 138 LHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYAL 194
              N  K R++I+  +R  M++  F+E  TP++    P GA  R F+          Y L
Sbjct: 170 KSYNTFKLRSKILAEIRNYMVSNGFMEVETPMMQVI-PGGASARPFITHHNALNSDLY-L 227

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
             +P+ + + L+  GFDR F+I   FR+E   PR +    EF  +++ M+  +  D++  
Sbjct: 228 RISPELFLKRLIVGGFDRVFEINRNFRNEGISPRHN---PEFTMMELYMAHADYRDLIKL 284

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
            EN+ R          TV+ N L       I +YG  + D   P +   + E  +H
Sbjct: 285 TENLFR----------TVAINTL----GSPIVKYGNIEFDFSKPFVQMTMREAIIH 326



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G+  GIDR+VMLL  +  +R+V LFP
Sbjct: 455 ALEYGMPPTAGLGIGIDRMVMLLTDSHTIRDVILFP 490


>gi|291279545|ref|YP_003496380.1| lysyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754247|dbj|BAI80624.1| lysyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 488

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 132/287 (45%), Gaps = 28/287 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPD--SACFEIAKSVRSEWVLCIDGLV 77
           V ++G V  +R  G   FL+I+D  G  QV +A  +     +EI K       + + G +
Sbjct: 52  VTVAGRVMAIREFGKAAFLNIKDRSGSIQVYIAKKELSEQEYEIFKKTDIGDFIGVSGYL 111

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RR 135
                        TG++ + A+  +IL+ A  +LP    G ++  +  R++ R++DL   
Sbjct: 112 FKTK---------TGELTVLAETYKILTKALRDLPEKWHGLKDVEK--RYRQRYVDLIVN 160

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
           D + +  + R++II  MR   I   FIE  TP++   +    AR F+        + Y L
Sbjct: 161 DEIRELFILRSKIIQRMRQFFIENEFIEVETPMMQPIAGGATARPFITHHNALDMTLY-L 219

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  G +R F+I   FR+E   +   P EF  ++  M++ +  D +   E
Sbjct: 220 RIAPELYLKRLVIGGLERVFEINRNFRNEGISTKHNP-EFTMVEWYMAYADYYDQMAFTE 278

Query: 255 NVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           N+L  + ++     T++           + ++  +D+I +Y   K D
Sbjct: 279 NMLYTIAKDVLGKTTITFGEYEIDLTPPWDKLTLEDSIEKYTDIKKD 325



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   G+DR+VML     ++REV LFP
Sbjct: 445 RALEYGLPPTAGQGLGVDRLVMLFTNKNSIREVILFP 481


>gi|322514329|ref|ZP_08067382.1| lysine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322119783|gb|EFX91817.1| lysine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 500

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 19/278 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  I+D  G  Q+    D+    +     S W L   G ++  
Sbjct: 64  VKVAGRIMLKRVMGKASFFTIQDVSGQIQLYVARDNLAEGVYADKVSMWDL---GDIVGV 120

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
           +         TG++ +   ++E+L+ +   PLP   +    +  R++ R+LDL   +   
Sbjct: 121 AGTLFKTK--TGELTVRCSEVELLTKSLR-PLPNKVQGLTDQETRYRQRYLDLISNEESR 177

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  + R+++++ +R   + ++FIE  TP+L        A+ F+    V     Y L  AP
Sbjct: 178 RTFMIRSKVVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNVLDVDMY-LRIAP 236

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F++   FR+E       P EF  ++   ++ +  D+++  E +LR
Sbjct: 237 ELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELLR 295

Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
            +  +     TV            F RI   DAI +YG
Sbjct: 296 KLAIDILGTTTVPYGEYVFDFGKPFERITMHDAIVKYG 333



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M+   A ++R+V LFP
Sbjct: 460 ALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILFP 495


>gi|225849439|ref|YP_002729604.1| lysyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643541|gb|ACN98591.1| lysyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 577

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 119/247 (48%), Gaps = 12/247 (4%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +  +R  G   F  ++D  G  Q+  N D    E   + +    L   G +
Sbjct: 137 GKEVAVAGRLVALRDQGKAAFGHLQDADGKLQIYFNADILGQE---NYQKAMDLIDIGDI 193

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +    +      +TG++ +     +ILS +   LP    G R+  E  R++YRFLDL  +
Sbjct: 194 VGVKGKLFRT--MTGELTVEVHSYQILSKSLRPLPEKWHGLRDVEE--RYRYRFLDLIAN 249

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYAL 194
              + I K R++ I S+R  + ++ FIE  TPIL   +S   A+ F+        + Y L
Sbjct: 250 QRSREIFKLRSKAIKSLREFLESKGFIEVETPILQPVASGALAKPFITYHNALDMNLY-L 308

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  GF+R F+I   FR+E   +   P EF  ++   ++++ +D++   E
Sbjct: 309 RIAPELYLKMLVVGGFNRVFEIGRNFRNEGIDTTHNP-EFTMVEFYAAYLDYNDLMALTE 367

Query: 255 NVLRGVF 261
            + R + 
Sbjct: 368 ELFRKIL 374



 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 14/154 (9%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM--PQ--GGMESLKGND 473
            + A+E+GI   +      I+D  F  + EE    D     F +  P+    +     ND
Sbjct: 423 KNFAKEVGIPKADTLTHMKILDKLFEHFVEE----DLVQPTFVIDFPKILSPLAKTHRND 478

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNH----MSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              ++ F+  L+ N  E+A+     +      E  +Q      +  E   +       A 
Sbjct: 479 PDLVERFE--LIINKQELANAYTELNDPFDQRERFIQQIREKEMGDEEAMDVDETFLTAL 536

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + G+PP  G   GIDR+VM+L  + ++REV LFP
Sbjct: 537 EYGLPPTAGEGIGIDRLVMMLTDSVSIREVILFP 570


>gi|20089645|ref|NP_615720.1| lysyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|39932434|sp|Q8TSN5|SYK2_METAC RecName: Full=Lysyl-tRNA synthetase 2; AltName: Full=Lysine--tRNA
           ligase 2; Short=LysRS 2
 gi|19914568|gb|AAM04200.1| lysyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 511

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 134/287 (46%), Gaps = 31/287 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKSVRSEWVLCI 73
           G  VR +G ++ +R HG +IF D+ D  G  QV+      PD         + S  ++ I
Sbjct: 72  GLSVRTAGRLYNIRKHGKMIFADLGDQTGRIQVLIRKGNLPDEEFATFKNLMDSGDIIGI 131

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLD 132
            G +              G+  +S  +  +LS +   LP    G ++     R++ R+LD
Sbjct: 132 QGELFRTK---------RGENSISVSEFSLLSKSLCALPEKFHGLKDV--ETRYRKRYLD 180

Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSR-VNQG 189
           L  +   + I V R+++I+ +R  +    F+E  TPIL T      AR F      + Q 
Sbjct: 181 LIVNAEKREIFVMRSKLISEIRRFLADREFLEFETPILQTVYGGANARPFKTFHNCLGQN 240

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            F  +  AP+ Y + L+  G+++ F+I+  FR+ED  +   P EF  +++  ++ + +D+
Sbjct: 241 LFLRI--APELYLKRLVVGGYEKVFEISKNFRNEDIDTTHNP-EFTMIEVYEAYRDYNDM 297

Query: 250 LNTMENV-------LRGVFEEFSNGNTVS--NNFLRICYDDAIRRYG 287
           ++  E +       L G +E     NT++  + + RI  + A++ Y 
Sbjct: 298 MDLTEALISELVFRLTGGYEVKMGENTINLRSPWKRISMEGALKEYA 344



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 14/92 (15%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---------YRAFQC 531
           +++L  NG+E+A+G      SE+           ++  + + G L           A   
Sbjct: 419 RFELFLNGWELANG-----YSELNDPLEQEKRFEEQDKKRKLGDLEAQTVDYDFINALGY 473

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP GG+  GIDR+ M+L G ++++EV LFP
Sbjct: 474 GLPPTGGMGLGIDRLTMILAGLESIKEVILFP 505


>gi|323691833|ref|ZP_08106089.1| aspartate-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323504115|gb|EGB19921.1| aspartate-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 443

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G E+ +GG R H    +L      G+  E +++        F+ GMPPHGG+  
Sbjct: 358 FDLLFRGLEVTTGGQRIHDYRELLAKIEKRGMDTEGMDDYLN----TFKYGMPPHGGLGI 413

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ M LLG +NVREVSLFP
Sbjct: 414 GLERMTMQLLGEENVREVSLFP 435



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 23/248 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L     G  V+++G V  +R  G I F+ +R   G+ Q V        E+++ ++ E  +
Sbjct: 19  LSYGKTGQEVKVNGAVMNIRNMGDIAFIILRKRDGVLQTVFEKGVTKAELSQ-LKEETFV 77

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G V                +EL    + ILS  E  P+P+    ++      + R L
Sbjct: 78  EVTGFVEPEERAPHG-------VELRLTGVRILSWPE-APVPI-AVSKWKMGASLEAR-L 127

Query: 132 DLRRDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           D+R  TL +N+ +R R      I  + R  +  E F E  TP + A   EG  +      
Sbjct: 128 DMRPLTL-RNVRERARFKIEEGIARAFREFLQGEGFTEIHTPKIGARGAEGGANVFKLDY 186

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ +   L Q+PQ YKQ+ M   FDR  +I P FR E   + R   E+  LD EM ++ 
Sbjct: 187 FHRPA--VLAQSPQFYKQM-MVGVFDRVMEIGPVFRAEKHNTKRHLNEYTGLDFEMGYI- 242

Query: 246 QDDILNTM 253
            DD  + M
Sbjct: 243 -DDFTDIM 249


>gi|167758612|ref|ZP_02430739.1| hypothetical protein CLOSCI_00952 [Clostridium scindens ATCC 35704]
 gi|167663808|gb|EDS07938.1| hypothetical protein CLOSCI_00952 [Clostridium scindens ATCC 35704]
          Length = 656

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 135/289 (46%), Gaps = 36/289 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCID 74
           G  V ++G + + R  G   F +I D  G  Q     DS     ++  K +    ++ I+
Sbjct: 64  GKQVSVAGRIMQKRVMGKASFCNILDQSGNIQSYVARDSVGEDSYKDFKKLDIGDIVGIE 123

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V             TG+I + A  + +LS + ++ LP          +R++ R++DL 
Sbjct: 124 GEVFKTK---------TGEISIHASAVNLLSKSLQI-LPEKYHGLTNTDMRYRQRYVDLI 173

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +T  ++  +KR+RI++++R  +  + F+E  TP+L +++   A      +R  +  F A
Sbjct: 174 MNTESRDTFIKRSRIVSAIRRYLDGQGFLEVETPMLVSNAGGAA------ARPFETHFNA 227

Query: 194 LPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           L +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + +
Sbjct: 228 LDEDFKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYN 286

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
            +++  EN+ R V +E      ++ N         F RI   DA+++Y 
Sbjct: 287 GMMDLTENLYRHVAQEVLGTTIITYNGVEMDLGKPFERITMIDAVKKYA 335



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+ ML+  +  +R+V LFP
Sbjct: 461 ALEIGMPPTGGIGFGIDRMCMLMTDSAAIRDVLLFP 496


>gi|288573299|ref|ZP_06391656.1| asparaginyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288569040|gb|EFC90597.1| asparaginyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 434

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 116/284 (40%), Gaps = 31/284 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V + GW++  R  G I FL IRD  G  Q V          FE AK +  E  + I G V
Sbjct: 19  VTIKGWMYNKRSSGKIHFLQIRDGSGFVQAVMVKKEVSPEEFEAAKKLWMEASVEITGTV 78

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            S         +    I+++          +E P+   G++++        R L LR   
Sbjct: 79  RSDDRAPSGVELTVSNIKVNHNP------TDEYPI---GKKDHGVDFLLDNRHLWLRSQR 129

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R RI+ S R  +   +F+   +PI+T +  EGA         +Q ++  L Q 
Sbjct: 130 QRAIMTIRERIVWSWRQFLHDRDFLLVDSPIITGAIGEGASGLFELDYFDQKAY--LAQT 187

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +   A+ + + +   P FR E  ++ R   EF+ L+ E+++ +  D ++  E ++
Sbjct: 188 GQLYAEAAAAA-YGKVYCFGPTFRAEKSKTRRHLTEFWMLEPEVAYYDHKDNMDLQEALV 246

Query: 258 RGVFEEFSN----------------GNTVSNNFLRICYDDAIRR 285
               E+                    + +   F RI Y DA+++
Sbjct: 247 SYTVEQVLEHCKEELALLERELSPLKSVLEGPFYRISYRDAVKK 290


>gi|163748443|ref|ZP_02155697.1| lysyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161332021|gb|EDQ02698.1| lysyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 502

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 142/317 (44%), Gaps = 45/317 (14%)

Query: 5   RTHSCGDLGVSDVGSFVR--LSGWVHRVRPHGGII-----FLDIRDHYGITQVVANPDSA 57
           R H   D+  ++ G + +  L G   +    G I+     FL I+D  G  Q  A+ D  
Sbjct: 37  RKHKAADIQ-AEYGQYTKVDLEGMAIQCSIAGRIMAKRGPFLVIQDVSGRIQAYASKD-- 93

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
              + K ++ +++    G ++           +TGQ+ LS  K ++    EE  L     
Sbjct: 94  ---VQKDLKEKFLGLDIGDIIG----------VTGQLHLSG-KGDLYVNMEEYQLLTKAL 139

Query: 118 REYPESI--------RFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPI 168
           R  PE          R++ R++DL  +   +N  + R++++ ++R  MI + F+E  TP+
Sbjct: 140 RPLPEKFHGLTDQETRYRQRYVDLIVNEESRNAFIMRSKVVAAIRNFMIKKEFMEVETPM 199

Query: 169 L-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           + T      AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S
Sbjct: 200 MHTIPGGATARPFITHHNALDIEMY-LRVAPELYLKRLVVGGFERVFEINRNFRNEG-LS 257

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG-------NTVS--NNFLRIC 278
            R   EF  ++  M++ +  D+++  E +L  +  E           +TV     ++R+ 
Sbjct: 258 PRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIATELCGSPKLPYGEHTVDFGGPYVRLS 317

Query: 279 YDDAIRRYGTDKPDLRN 295
             DAI++Y  D   +++
Sbjct: 318 MLDAIKKYNPDNETIQS 334



 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G E+A+G    + +E   Q F     +K+  ++    +   Y RA + G+PP 
Sbjct: 408 RFEFFIGGREVANGFSELNDAEDQDQRFKAQVAAKDAGDDEAMFYDADYIRALEHGLPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML      +R+V LFP
Sbjct: 468 AGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|261417017|ref|YP_003250700.1| lysyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261373473|gb|ACX76218.1| lysyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302327834|gb|ADL27035.1| lysine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 501

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 114/253 (45%), Gaps = 29/253 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V  +G V R    G + F+ ++D YG  QVV   D      +EI K       + ++G +
Sbjct: 55  VAFAGRVVRFNRKGKMCFMHLKDRYGRLQVVVARDEVGEENYEIVKMTDLGDFIGVNGTM 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-----------EYPE-SIR 125
                        +G+  + A+K+ +LS A   PLPV  E+           E+ +   R
Sbjct: 115 FETQ---------SGEYSVRAEKVTMLSKAVR-PLPVAKEKVDENGNKVVFNEFADVDTR 164

Query: 126 FKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
           ++ R++D+   D + +  +KR++I+ ++R  +I + FIE  TP L        AR F   
Sbjct: 165 YRQRYIDMALNDDVKEVFIKRSKIMQAIREYLIEKGFIEVETPTLQPIYGGANARPFTTH 224

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                 + Y L  AP+ Y +  +  G ++ F+    FR+E       P EF  L+   ++
Sbjct: 225 HNACDMTLY-LRVAPELYLKRCIIGGMEKVFEFCKNFRNEGMDRTHSP-EFTGLEFYEAY 282

Query: 244 VEQDDILNTMENV 256
            + +D++   EN+
Sbjct: 283 ADYNDMMVHFENI 295



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 28/39 (71%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + G+PP GG+  GIDR+VMLL   + +R+V LFP+ +
Sbjct: 460 AVESGLPPTGGVGFGIDRMVMLLTNQQTIRDVQLFPLMK 498


>gi|220918011|ref|YP_002493315.1| asparaginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955865|gb|ACL66249.1| asparaginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 434

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 114/286 (39%), Gaps = 32/286 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74
           G  + L GW+H  R  G + FL +RD  G  Q V    N     F+ +  +  E  L + 
Sbjct: 15  GKEITLHGWLHNRRSSGKLHFLQLRDGTGTIQCVVFKGNVTPEVFQASDHLPQETSLTVT 74

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           GLV       I         EL  + ++++S  A+E P+   G +E+  +   + R L L
Sbjct: 75  GLVKKDERSPIG-------FELDVRDLQVVSRPAQEFPI---GHKEHGVAFLMEQRHLWL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +  ++R       F     PI T S+ EG          + G  Y 
Sbjct: 125 RSQRQQVILRVRHTVEKAIRDFFDQRGFTLVDAPIFTPSACEGTSTLFEVPYFDLGKAY- 183

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E+++++ D  +  M
Sbjct: 184 LTQSGQLYME-AAAMALGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVAYMDLDGDMELM 242

Query: 254 ENVLRGVFE----------------EFSNGNTVSNNFLRICYDDAI 283
           E  +  V +                + S    V   F RI Y +A+
Sbjct: 243 EQFVSYVVQTALEKHRVELATVLERDVSKLENVKAPFPRITYTEAV 288


>gi|150014997|ref|YP_001307251.1| lysyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149901462|gb|ABR32295.1| lysyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 501

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 143/301 (47%), Gaps = 31/301 (10%)

Query: 5   RTHSCGDLGVS-DV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++  + D   G  V ++G +   R  G ++F DI D  G  Q+    D    E 
Sbjct: 44  RTHTSEEVKANYDALEGKEVTVAGRLMSKRGQGKVVFSDIHDKDGKIQLFLKIDKVGEEN 103

Query: 62  AKSVRS----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            K  ++    +W+     +  +++ E ++ N+ T   EL+ + ++        PLP    
Sbjct: 104 LKQYKTFDLGDWIAATGEVFTTKTGE-VSVNVNT--FELTCKSLK--------PLPEKWH 152

Query: 118 REYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPE 175
                 +R++ R +D+  +T  K+  +KR++II+++R  + A++FIE  TPIL   +   
Sbjct: 153 GLKDPDLRYRQREVDIITNTEVKDTFIKRSKIISAIREFLDAKSFIEVETPILGAIAGGA 212

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            A+ F+          Y L  A + Y + L+ +GF++ ++I   FR+E   S R   EF 
Sbjct: 213 AAKPFITHHNTLDMDMY-LRIATELYLKRLIVAGFEKVYEIGRNFRNEG-MSVRHNPEFT 270

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            +++  ++ + +D++   EN++  + E+ +    V+           + RI   DA++ Y
Sbjct: 271 AIELYEAYSDYNDMMEITENMVAYICEKVNGTTKVAYQGTEIDFKPPWRRITMVDAVKEY 330

Query: 287 G 287
            
Sbjct: 331 A 331



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M L  + ++R+V LFP
Sbjct: 460 ALETGMPPTGGMGMGIDRLIMFLTDSASIRDVILFP 495


>gi|266622513|ref|ZP_06115448.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288865768|gb|EFC98066.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 470

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 36/312 (11%)

Query: 1   MHRYRTHSCGDLGVSD-VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           + R  T    DL   D  G  V L+G VH +R  G + F+ +R   G+ Q V       +
Sbjct: 7   IQRKETVELADLLSGDYTGKTVSLNGAVHTIRDMGEVSFVILRKAEGLVQCVRERSVPVY 66

Query: 60  EIAKSVRSEWVLCIDG---------LVMSRSAETINANIITG----------QIELSAQK 100
              +          DG          + S   +  +A  +TG           +E+   +
Sbjct: 67  RAGERGAGAAQEAADGGLEFADNGPEIPSAELKEESAVTVTGIVSPEPRAPHGVEIRLTE 126

Query: 101 IEILSV-AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR------IINSMR 153
           I++LS  AE LP+ V  + +   S+  K   L LR  TL +N ++R +      I+   R
Sbjct: 127 IKVLSTPAEVLPIAV-SKWKLNTSLETK---LALRPITL-RNPMERAKFRIQEGIVRGFR 181

Query: 154 CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
             + ++ F E  TP + A   EG  +       N+ +   L Q+PQ YKQ  M   +DR 
Sbjct: 182 DFLHSQGFTEIRTPKIVARGAEGGSNVFRLDYFNKKA--ELGQSPQFYKQT-MVGVYDRV 238

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSN 272
           F+ AP FR E   + R   E+  LD EM +++  +D++    ++L+ V +  S       
Sbjct: 239 FEAAPVFRAEKHNTTRHLNEYTSLDFEMGYIDGFEDVMAMETSMLQYVMKLLSEEYEKEL 298

Query: 273 NFLRICYDDAIR 284
             L++   D  R
Sbjct: 299 RMLKVTLPDVAR 310



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EI +GG R H  + +++     G+  E            F+ GMPPHGG
Sbjct: 382 TLSFDLLFKGLEITTGGQRIHDYDTIIKKMEKRGMDPE----ELASYLMIFKYGMPPHGG 437

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+ M LL  +NVRE ++FP
Sbjct: 438 LGIGLERLTMRLLDEQNVRETTMFP 462


>gi|325849665|ref|ZP_08170868.1| lysine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480006|gb|EGC83084.1| lysine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 637

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 128/262 (48%), Gaps = 27/262 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75
           G  VR++G +   R HG + F+D++D  G  QVV   N     F+  K      ++ I+G
Sbjct: 53  GKVVRVAGRIMARRGHGNMSFMDVQDSLGQIQVVNRKNVMGDNFKETKGYDIGDLIGIEG 112

Query: 76  LVMSR-----SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            V        S ET +A+++T  +++             LP    G ++ P+ IR++ R+
Sbjct: 113 KVFKTNQGEVSIETEHADLLTKSLQI-------------LPEKWHGLKD-PD-IRYRQRY 157

Query: 131 LDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQ 188
           +DL  +   K++ V R++II+ +R  +    F+E  TPIL T +    AR F+       
Sbjct: 158 VDLIVNPEVKDVFVLRSKIISEIRRFLENRGFLEVETPILNTIAGGATARPFITHHNSLD 217

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  A + Y + L+  GFD+ ++I   FR+E   +   P EF  +++  ++ + +D
Sbjct: 218 IGMY-LRIASELYLKRLIVGGFDKVYEIGRMFRNEGMDATHNP-EFTTMELYQAYGDFED 275

Query: 249 ILNTMENVLRGVFEEFSNGNTV 270
           ++   E ++  V  +   G+TV
Sbjct: 276 MMEITETMVEYVANKVK-GSTV 296



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M+L G  ++R+V LFP
Sbjct: 447 ALEVGMPPTGGLGIGIDRLIMILTGQHSIRDVLLFP 482


>gi|66523683|ref|XP_393437.2| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic [Apis mellifera]
          Length = 533

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 125/281 (44%), Gaps = 26/281 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSEWVLCIDGL 76
           V L G +H  R  G   F+ +R   Y I  + A  +    ++ K   ++  E ++ I+ +
Sbjct: 90  VWLRGRLHTSRAKGKQCFIVLRQQSYTIQGLAAVNNKVSKQMIKFISNITKESIVDIEAI 149

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF-GEREYPESI---------- 124
           V   S++    +     +E+  +K  ++S A+ +LPL +    R   E +          
Sbjct: 150 VKCVSSQI--ESCTQKDVEIHIEKAFVISSAKPQLPLQIEDASRPIKEEVDDNILNIKVN 207

Query: 125 ---RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDF 180
              R   R LDLR             I    R  +  + F+E  TP I++A+S  GA  F
Sbjct: 208 QDTRLDNRVLDLRTPANQAIYRVEAAICKLFRDILTNKGFVEIHTPKIISAASEGGANVF 267

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            V     +G+ Y L Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R   EF  LD+E
Sbjct: 268 TVS--YFKGNAY-LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVGLDLE 324

Query: 241 MSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
           M+F     +++ T+  +   +F+   N        +R  Y+
Sbjct: 325 MAFKYHYHEVVETIGQLFVEIFKGLRNNYAAEIEAVRQQYN 365



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E++ +     GI  E +++       AF+ G PPH G   
Sbjct: 448 YDMFMRGEEIISGAQRIHDPELLTERAKYHGIDLEKIKSYID----AFKYGCPPHAGGGI 503

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+VS+FP
Sbjct: 504 GMERVVMLYLGLDNIRKVSMFP 525


>gi|327282572|ref|XP_003226016.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           [Anolis carolinensis]
          Length = 480

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/316 (22%), Positives = 130/316 (41%), Gaps = 51/316 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCID 74
            G+ +++ GWV  VR    ++FL I D   +   QVVA+P     E+      E    + 
Sbjct: 41  TGNDIKVQGWVRSVRSQKEVLFLHINDGSSLESLQVVADPRLESRELTFGSSVE----VQ 96

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++    +  N       +EL+A+ I ++   + L  P+  +   P     ++  +  R
Sbjct: 97  GKLIKSPHKRQN-------VELAAENIRVVGPCDSLAFPLKYKTHQPLEYLRQFPHVRCR 149

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL-------VPSRVN 187
            ++L   +  R+    ++        ++   TPI+T++  EGA +         V     
Sbjct: 150 SNSLSALLRIRSEATGAIHSYFKDNGYLHIHTPIITSNDCEGAGEVFQVEPAKEVKEPEE 209

Query: 188 QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              F+ +P       QL   +MA  F + +   P FR +  +S +   EFY ++ E++FV
Sbjct: 210 NPHFFNIPAFLTVSGQLHLEVMAGAFTKVYSFGPTFRADYSQSRKHLAEFYMVEAELAFV 269

Query: 245 EQ-DDILNTMENVLRGV-----------FEEFSNG----------NTVSNNFLRICYDDA 282
           E   D++  ME++ + V            E F               ++N F+ + Y +A
Sbjct: 270 ESLQDVMQIMEDLFKRVTDVVLSKCPHDIELFHKHVAPGQKAKLEKMLNNQFITMPYTEA 329

Query: 283 I------RRYGTDKPD 292
           I      R Y T KP+
Sbjct: 330 IEVLKGAREYFTYKPE 345



 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 6/90 (6%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  E+  G +R    + +      +G+     E+ +       Q G  PHGG   
Sbjct: 396 DLLVPGVGELCGGSLREDRLDFLQSRLQRLGL-----EDTYQWYLELRQFGSTPHGGFGM 450

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R +  +LG +N+++V  FP     C L
Sbjct: 451 GFERYLRCILGVENIKDVIPFPRFPRSCLL 480


>gi|224456425|ref|ZP_03664898.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158489|gb|ADA77880.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 560

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 33/310 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV       PD   
Sbjct: 106 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 164

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +E  K+      LC  G ++  +      N  TG++ + A   EIL+ A   PLP     
Sbjct: 165 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 215

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
              + +R++ R++DL  +   + + K R++++N +R      +F+E  TP++      GA
Sbjct: 216 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVNFIRNYFDRLDFMEVETPMMHVLQGGGA 275

Query: 178 RDFLVPSRVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                P + +  +      L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF
Sbjct: 276 AK---PFKTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EF 331

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRR 285
             L+  M++ + +D+++  E++L  + +E      +            + RI   D+I +
Sbjct: 332 TMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVK 391

Query: 286 YGTD--KPDL 293
           Y  D  K DL
Sbjct: 392 YNDDITKEDL 401



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VM L  ++++R+V LFP
Sbjct: 519 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 555


>gi|145627807|ref|ZP_01783608.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144979582|gb|EDJ89241.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 502

 Score = 71.2 bits (173), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 21/289 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W L  
Sbjct: 57  LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTWDL-- 114

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++            T ++ +   ++++L+ A   PLP        + +R++ R+LDL
Sbjct: 115 -GDIVGVKGTLFKTK--TDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDL 170

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+         
Sbjct: 171 ISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVD 229

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F++   FR+E       P EF  L+   ++    D++
Sbjct: 230 MY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYANYHDLM 287

Query: 251 NTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
           +  E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 288 DNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336



 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|229023724|ref|ZP_04180214.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228737570|gb|EEL88076.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1272]
          Length = 370

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 89/175 (50%), Gaps = 4/175 (2%)

Query: 94  IELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSM 152
           +E+ A +++IL+ AE LP  +  ++ +         R L LR + +      ++ ++ S 
Sbjct: 21  VEVLAHEVKILNGAEPLPFEINKKKLQVGLDQLLNERVLSLRHERIAAIFKVKSTLVQSF 80

Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
              +I  +F    TP + +   EG  +        + ++ A  Q+PQ YKQ+++A G +R
Sbjct: 81  SEFLIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAYLA--QSPQFYKQMMVAGGLER 138

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
            F++AP +R E   S R   E+  LD+E+ F+    +++    +VLR +F++ + 
Sbjct: 139 VFEVAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYEVMQLETDVLRYMFQQVAK 193



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 63/141 (44%), Gaps = 27/141 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I  +P             A   +TMP    E++  +         +DL+  G EI 
Sbjct: 256 EFVFITHYP-----------KEARPMYTMPNKENEAVTDS---------FDLLYKGLEIT 295

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  E++L +F   G+  E    +F      F+ G PPHGG   G++R+V  LL 
Sbjct: 296 SGAQRIHNHEMLLASFKEKGLHPE----KFQSYLNTFRYGCPPHGGFGIGLERVVYKLLE 351

Query: 553 AKNVREVSLFPMSQNFCDLLM 573
             NVRE S FP     C  LM
Sbjct: 352 LTNVREASAFPRD---CTRLM 369


>gi|296125772|ref|YP_003633024.1| lysyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296017588|gb|ADG70825.1| lysyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 507

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 114/247 (46%), Gaps = 19/247 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV-----LCIDG 75
           V ++G +   R  G   FL I+D  G  Q     D    E   +V  + +     + I G
Sbjct: 66  VSIAGRIMLYRVMGKSSFLTIKDSQGTIQAYIQRDKVGDEFYNTVFKKLIDIGDIVGIKG 125

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-R 134
            V             TG+I + A ++++L+ +   PLP          +R++ R++DL  
Sbjct: 126 TVFKTK---------TGEITVYASELKLLTKSLN-PLPEKFHGLTDTELRYRQRYVDLIM 175

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYA 193
            D + +  +KR+++I+++R  MI  NF+E  TP++        A+ F+        + Y 
Sbjct: 176 NDDVKEAFIKRSKMISAIREVMIEHNFLEVETPMMHPLIGGAKAKPFVTHHNTLDMTLY- 234

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GFDR F++   FR+E   +   P EF  ++  M++     ++  +
Sbjct: 235 LRIAPELYLKRLVVGGFDRVFELNRNFRNEGISTRHNP-EFTMMEAYMAYANFYKVMELV 293

Query: 254 ENVLRGV 260
           E+V   V
Sbjct: 294 EDVFSKV 300



 Score = 45.1 bits (105), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+ +L L A ++R+  LFP
Sbjct: 465 ALEYGLPPTGGLGIGIDRMAILFLNAASIRDTILFP 500


>gi|145633058|ref|ZP_01788790.1| lysyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144986284|gb|EDJ92863.1| lysyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 502

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 29/293 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69
           + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    +       W    
Sbjct: 57  LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGD 116

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           ++ + G +             T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 117 IIGVKGTLFKTK---------TNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186
           +LDL   +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+     
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNA 225

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  AP+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ + 
Sbjct: 226 LDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADY 283

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
            D+++  E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 284 HDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATVKYGADK 336



 Score = 40.8 bits (94), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|307069665|ref|YP_003878142.1| lysyl-tRNA synthetase [Candidatus Zinderia insecticola CARI]
 gi|306482925|gb|ADM89796.1| lysyl-tRNA synthetase [Candidatus Zinderia insecticola CARI]
          Length = 495

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 28/264 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD-----HYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V LSG +   R  G I F +IRD       GI Q+  N ++        + ++  + I  
Sbjct: 57  VSLSGRIILKRIMGKISFFNIRDFSKKNKIGIIQLYINLNN--------IGNKKYIEIKN 108

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLP--VFGEREYPESIRFKYRFLD 132
             +      I     T   ELS    +I  + + L PLP  ++    Y +  +   R+LD
Sbjct: 109 YDLGDIIGIIGILFKTNTNELSVNVNKIKLITKSLRPLPNKIYNNLNYKKYYK---RYLD 165

Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
              ++ + NI +KR  IIN +R      NF+E  TPIL  + P GA    +P       F
Sbjct: 166 FIMNSENMNIFIKRIMIINKIRSFFKKNNFLEVETPIL-HNIPGGAEA--IPFITYHNKF 222

Query: 192 YA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           Y    L  +P+ Y + L+  GF+R ++I   FR+E   S   P EF  L+  +++V    
Sbjct: 223 YKKMFLRISPELYLKKLIIGGFERIYEINKSFRNEGISSTHNP-EFTILEFYITYVNYKW 281

Query: 249 ILNTMENVLRGVFEEFSNGNTVSN 272
           I+  +E  ++ +  + +N N + N
Sbjct: 282 IMKFVEKFIKNIIYK-TNKNYIIN 304



 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + GMPP  G   GIDR+VM+L    N++++ LFP
Sbjct: 456 KALEYGMPPTSGCGIGIDRLVMILNNISNIKDIILFP 492


>gi|253681352|ref|ZP_04862150.1| lysine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253562590|gb|EES92041.1| lysine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 510

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 18/257 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCID 74
           G  V ++G +   R HG   F DIRD YG  Q+    D    E  K  ++  +   + I 
Sbjct: 69  GKNVTVAGRLMSKRVHGKAGFSDIRDRYGKIQLYIKIDDVGEEKLKEYKTFDIGDFVSIT 128

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G V             TG++ L     ++L+ + + PLP          +R++ R++DL 
Sbjct: 129 GTVFKTK---------TGEVTLHIVDFKLLTKSLK-PLPEKFHGLKDPDLRYRQRYVDLI 178

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
             + + +  +KRT II ++R  +   +F+E  TPIL+  +    A+ F+          Y
Sbjct: 179 MNEDVRETFMKRTAIIKAIREFLDNRDFLEVETPILSPIAGGAAAKPFITHHNALDIDMY 238

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF++ ++I   FR+E       P EF  +++  ++ + +D++  
Sbjct: 239 -LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP-EFTAIELYEAYADYNDMMEI 296

Query: 253 MENVLRGVFEEFSNGNT 269
            EN++  V E+  NG T
Sbjct: 297 TENMVAYVCEKV-NGTT 312



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M L  + ++R+V LFP
Sbjct: 469 ALEIGMPPTGGLGIGIDRLIMFLTDSSSIRDVILFP 504


>gi|219129606|ref|XP_002184975.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403470|gb|EEC43422.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 460

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 127/312 (40%), Gaps = 50/312 (16%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVV-------ANPDSACFEIAKSVRSEW 69
           G  V L G +  +R  G   FL +R + +   Q         A          K++ +E 
Sbjct: 14  GDRVWLRGRLQSIRGKGKSWFLVLRQNSFDTVQACYFKNVDDAEASQKMIRYLKTLTAES 73

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFG------------ 116
           V+ ++G ++    ++ +       +EL+  +I  +S A+  LP  V              
Sbjct: 74  VVDLEGTLVDADVKSCSVK----NVELNIHRIHTVSKADAILPFEVEDAARSEQEVEASQ 129

Query: 117 --EREYP---ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
             ER +P   + +R  +R++DLR      N + R   I S  C++    F E  TP L A
Sbjct: 130 NTERPFPRLGQELRLDHRWMDLRAPA--NNAIMR---IQSAVCQLFG--FCEIHTPKLIA 182

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
              E             G+   L Q+PQ YKQ+ +AS   R F+I P FR E+  + R  
Sbjct: 183 GESESGAGVFTTDYF--GTTACLAQSPQLYKQMAIASDLPRVFEIGPVFRAENSNTRRHL 240

Query: 232 GEFYQLDMEMSFVEQDDILNTMENV---LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
            EF  LD+EM+    D  L T+E V    + +F    +      N +R  YD     +  
Sbjct: 241 CEFTGLDLEMAI--DDHYLETLEVVHELFKHIFTGLESRWAKELNIIREQYDSEPVAFTP 298

Query: 289 DKPDLRNPIIMH 300
           D      P ++H
Sbjct: 299 D------PCVLH 304



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +     GI    V +       +F+ G+ PH G   
Sbjct: 374 YDIFIRGQEICSGAQRCHDPDLVEKILQEKGIE---VGDGLKSYIESFRHGVSPHAGAGI 430

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G++R+V L LG  NVR+ S+FP   N C
Sbjct: 431 GLERVVFLYLGLDNVRKASMFPRDPNRC 458


>gi|145631261|ref|ZP_01787034.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983188|gb|EDJ90683.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 502

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 21/282 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W L   G ++  
Sbjct: 64  VQVAGRIMTRRAMGKATFITIQDMSGKIQLYIARDNLPEGVYKDDVGTWDL---GDIVGV 120

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     T ++ +   ++++L+ A   PLP        + +R++ R+LDL   +   
Sbjct: 121 KGTLFKTK--TDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISNEESR 177

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  + R++++  +R   I++ F+E  TP+L    P GA  R F+          Y L  A
Sbjct: 178 RTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVDMY-LRIA 235

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ +  D+++  E +L
Sbjct: 236 PELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADYHDLMDNTEELL 294

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
           R +  +      V            F RI   DA  +YG DK
Sbjct: 295 RKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336



 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVTAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|149637054|ref|XP_001510544.1| PREDICTED: similar to Aspartyl-tRNA synthetase [Ornithorhynchus
           anatinus]
          Length = 329

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 28/203 (13%)

Query: 148 IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I +  R  +  + F+E  TP + +++ EG  +    S     ++ A  Q+PQ YKQ+ + 
Sbjct: 28  ICHLFRETLTHKGFVEIQTPKIISAASEGGANVFTVSYFKSSAYLA--QSPQLYKQMCIC 85

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFE 262
           + F++ F I P FR ED  + R   EF  LD+EM+F        D+I +T+  + +G+ E
Sbjct: 86  ADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQE 145

Query: 263 EFSNG-NTVSNNF-----------LRICYDDA---IRRYGT---DKPDLRNP--IIMHNV 302
            F     TVS  F           LR+ Y +A   +R  G    D+ DL  P   ++  +
Sbjct: 146 RFQTEIQTVSKQFPCEPFKFLEPTLRLEYREALALLRGAGVEMGDEEDLSTPNEKLLGRL 205

Query: 303 TEHFVHSEFRVFSKI-LSVNPGY 324
            +    ++F +  K  L+V P Y
Sbjct: 206 VKEKYDTDFYILDKYPLAVRPFY 228



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 12/114 (10%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF TMP  G            ++  YD+   G EI SG  R H  +++ +   
Sbjct: 219 KYPLAVRPFYTMPDPGNPK---------QSNSYDMFMRGEEILSGAQRIHDPQLLTERAQ 269

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + GI   +   +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP
Sbjct: 270 HHGIGNYL--EKIKAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFP 321


>gi|313836706|gb|EFS74420.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314929886|gb|EFS93717.1| lysyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|328907744|gb|EGG27508.1| lysine--tRNA ligase [Propionibacterium sp. P08]
          Length = 1081

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 113/268 (42%), Gaps = 26/268 (9%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+     G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+      +  R
Sbjct: 626 HQPGDVVTELTGQEMTVSGRVDACRDHGGVIFIDLFDWTGACQLVMERDAVGVNNLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV   +  T+ A+   G + L       L+     PLP           + 
Sbjct: 686 HT-VSLGDHLV---ATGTVGAS-RNGTLSLKVTSWR-LAAKSLRPLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
           + R+LDL      RD L      R+  I ++R  +++ +FIE  TPIL T      AR F
Sbjct: 740 RQRYLDLIVNPGARDQLR----ARSNAIRAVRETLLSHDFIEVETPILQTIHGGANARPF 795

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD-- 238
                      Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+  
Sbjct: 796 RTHINAYDLELY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAY 853

Query: 239 ------MEMSFVEQDDILNTMENVLRGV 260
                 ++M  + Q+ IL+   N + G 
Sbjct: 854 QAYGDYVQMRHLTQEMILSAARNAIGGT 881



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VMLL  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMLLTNA-SIRETISFPL 1075


>gi|225620049|ref|YP_002721306.1| lysyl-tRNA synthetase LysU (class II) [Brachyspira hyodysenteriae
           WA1]
 gi|225214868|gb|ACN83602.1| lysyl-tRNA synthetase LysU (class II) [Brachyspira hyodysenteriae
           WA1]
          Length = 510

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 19/247 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV-----LCIDG 75
           V ++G +   R  G   FL I+D  G  Q     D    E   +V  + +     + + G
Sbjct: 70  VAIAGRIMLYRVMGKSSFLTIKDAEGTIQAYIQRDKVGDEFYNTVFKKLIDIGDIVGVKG 129

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-R 134
            V             TG+I + A ++++L+ +   PLP          +R++ R++DL  
Sbjct: 130 TVFKTK---------TGEITIYANELKLLTKSLN-PLPEKFHGLTDTELRYRQRYVDLIM 179

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYA 193
            D + +  +KR+++I+++R  MI  NF+E  TP++        A+ F+        + Y 
Sbjct: 180 NDDVKEAFIKRSKMISAIREVMIENNFLEVETPMMHPLIGGAKAKPFITHHNTLDMTLY- 238

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GFDR F++   FR+E   +   P EF  ++  M++     ++  +
Sbjct: 239 LRIAPELYLKRLVVGGFDRVFELNRNFRNEGISTRHNP-EFTMMEAYMAYANFHKVMELV 297

Query: 254 ENVLRGV 260
           E V   V
Sbjct: 298 EEVFSKV 304



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+ +L L   ++R+  LFP
Sbjct: 469 ALEYGLPPTGGLGIGIDRMAILFLNVASIRDTILFP 504


>gi|110640530|ref|YP_668258.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli 536]
 gi|191171296|ref|ZP_03032846.1| lysyl-tRNA synthetase [Escherichia coli F11]
 gi|300988985|ref|ZP_07178881.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|28316248|emb|CAD66193.1| putative lysil-tRNA synthetase LysU [Escherichia coli]
 gi|110342122|gb|ABG68359.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli 536]
 gi|190908596|gb|EDV68185.1| lysyl-tRNA synthetase [Escherichia coli F11]
 gi|300305805|gb|EFJ60325.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|324010339|gb|EGB79558.1| lysyl-tRNA synthetase [Escherichia coli MS 60-1]
          Length = 498

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 31/261 (11%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRS 67
           DL   D+   V ++G +   R  G  IF+ I+D+ G  Q+  + D    + F   K + +
Sbjct: 54  DLTKKDIN--VIMAGRIMSRRIMGKSIFMHIQDNKGRIQLYCSSDILPESTFSDIKKLDT 111

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
             ++ I G +             T   ELS    EI  + + L PLP        + +R+
Sbjct: 112 GDIIGIKGKLFK-----------TKTNELSVNCYEISLLTKSLRPLPDKFHGLLDQELRY 160

Query: 127 KYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLV 182
           + R++DL    DT ++    R+RI+  +R  M   +F+E  TP++  S P GA  R F+ 
Sbjct: 161 RQRYVDLIVNHDT-YRTFETRSRILTEIRRYMAEHDFMEVETPMM-QSIPGGASARPFIT 218

Query: 183 P-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDM 239
             + ++Q  F  +  +P+ Y + L+  GF+R F+I   FR+E   PR +    EF  +++
Sbjct: 219 HHNALDQDMFLRI--SPELYLKRLVVGGFERVFEINRNFRNEGISPRHN---PEFTMMEL 273

Query: 240 EMSFVEQDDILNTMENVLRGV 260
            +++ +  D++N  E++ R V
Sbjct: 274 YIAYADFHDLINFTEDLFRTV 294



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G+  GIDR++ML      +R+V +FP
Sbjct: 457 ALEYGMPPTAGLGIGIDRMIMLFTNCHTIRDVIMFP 492


>gi|188534902|ref|YP_001908699.1| lysyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238689741|sp|B2VF45|SYK_ERWT9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|188029944|emb|CAO97828.1| Lysyl tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 506

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 133/293 (45%), Gaps = 27/293 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L   G 
Sbjct: 64  LGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL---GD 120

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +
Sbjct: 121 ILGARGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
              +N  K R++I+  +R  M+  +F+E  TP++ A  P GA  R F+          Y 
Sbjct: 178 DDSRNTFKIRSQIMAGIRSFMVDRDFMEVETPMMQAI-PGGASARPFITHHNALDLDMY- 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           L  AP+ Y + L+  GFDR F+I   FR+E   PR +    EF  +++ M++ +  D++ 
Sbjct: 236 LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHN---PEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDL 293
             E++ R + ++      V            F ++   +AI +Y   TD  DL
Sbjct: 293 LTESLFRTLAQDVLGSTVVPYGDQQFDFGKPFEKLTMKEAILKYRPQTDLADL 345



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|87307059|ref|ZP_01089205.1| lysyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87290432|gb|EAQ82320.1| lysyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 686

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 137/330 (41%), Gaps = 49/330 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
            S  G  VR++G +  +RP G ++F D+RD  G  Q+    +      ++IA+ +    +
Sbjct: 246 TSFAGPKVRIAGRIVLMRPTGKLVFADLRDRTGRIQIFIGQNQVGERNWQIAQCLDLADI 305

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + +DG +             TG++ +  +++  L+   + P         PE +R + R+
Sbjct: 306 IGVDGELRKTK---------TGELTIFVEQLHFLTKTLDPPPEKHKGLTDPE-LRQRMRY 355

Query: 131 LDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           LDL   D   +  VKRT I+ S+R  +  +NFIE   P L A +    AR F+       
Sbjct: 356 LDLAHTDGAIERFVKRTEIVKSIRKTLADQNFIEIEGPTLHAIAGGAAARPFITHHNALG 415

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y         K+LL+  G +R F++   +R+E       P EF  L++  ++ +   
Sbjct: 416 MELYMRIALELHLKRLLVG-GMERVFELGRVYRNEGISPKHNP-EFTMLEVYQAYGDYRS 473

Query: 249 ILNTMENVLRGVFE------EFSNGNTVSN---NFLRICY--------------DDAIRR 285
           +++  E V+ G         E   G T+ N    F R  Y              D A++R
Sbjct: 474 MMDLTEAVISGAINAIGASFELPYGETMVNFAPPFERRTYAELFQENTGVDPTDDAAVKR 533

Query: 286 YGTD--------KPD-LRNPIIMHNVTEHF 306
           Y  +         PD +RN I    V +  
Sbjct: 534 YAINLGLETEGKHPDVIRNEIFEEKVEDQL 563



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 5/90 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMP 534
           A +++L  NG E+A+     +  ++  + F    +  +  E+    +     RA + GMP
Sbjct: 590 AERFELFINGMEVANAYTELNDPDLQDKLF-RTQLDGQADEDSMAKMDHDFIRALRNGMP 648

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+VMLL   + +RE+ LFP+
Sbjct: 649 PAGGLGIGIDRLVMLLTNTQTIREIILFPL 678


>gi|227498560|ref|ZP_03928704.1| lysyl-tRNA synthetase class II [Acidaminococcus sp. D21]
 gi|226904016|gb|EEH89934.1| lysyl-tRNA synthetase class II [Acidaminococcus sp. D21]
          Length = 657

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 117/250 (46%), Gaps = 19/250 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + + G+ VR++G +  +R HG   F+D+ D  G  Q+    D    E+ +   S   L  
Sbjct: 61  LEEKGAEVRVAGRLTAIRGHGKTAFMDLLDKSGKIQLYVRKD----ELGEDNYSVVKLLD 116

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    E    ++  G+  +  +K+E LS A + PLP        + IR++ R++DL
Sbjct: 117 IGDIVGVEGEVFTTHM--GEPSIRVKKLEFLSKALK-PLPEKWHGLKDKEIRYRQRYVDL 173

Query: 134 -----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187
                 RDT     VKRT II S+R  +  E ++E  TP+L T S    AR F+      
Sbjct: 174 IVNPEVRDTF----VKRTEIIKSIRNILDNEGYLEVETPVLNTISGGATARPFVTHHNAL 229

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A +   + L+  G +R ++I   FR+E       P EF  +++  ++ +  
Sbjct: 230 DIDLY-LRIATELNLKRLIVGGLERVYEIGRIFRNEGMDIKHNP-EFTSIELYEAYGDYQ 287

Query: 248 DILNTMENVL 257
            +++  E ++
Sbjct: 288 TMMDITEKLV 297



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   G+PP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 462 ALMHGLPPTGGLGIGIDRLVMLLTNSASIRDVLLFP 497


>gi|226287399|gb|EEH42912.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 968

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 26/274 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSA-----CFEIAKS 64
           ++ V  VG  V     VH VR     ++F+  R      Q V    +        + A+ 
Sbjct: 153 NITVDLVGQEVMFRARVHHVRRMSSKLVFIVFRQQIITFQGVLAEKAGQVSTFMIQWAEH 212

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVF-------- 115
           +R   ++ + G +       +   I    +EL  +K+ ++   EE +P  V+        
Sbjct: 213 IRVGSIVKVKGKLSKSLVPVVGCTI--HDVELDIEKLHVIVRREEPVPFSVYEAELTTRE 270

Query: 116 -----GEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                G R +  +  R   R LDLR D        ++ + N     + ++ FIE  TP L
Sbjct: 271 EHTHDGRRNHILDKTRLSNRILDLRTDASQSIFRIQSAVSNLFHSALDSQGFIEIHTPKL 330

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             S+ E        S  ++ +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R
Sbjct: 331 QGSATESGASVFEVSYFSRAAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHR 388

Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
              E+  LD+EM+  E   + L  +++VL+ +F+
Sbjct: 389 HLTEYTGLDIEMAIDEHYHEALEVIDSVLKEIFK 422



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H  +++ +   + GI    +E+   G    F+ G PPH G   
Sbjct: 528 FDIFVRGQEIVSGGQRIHDEKILEKRMRDAGIDPLTMEDYLEG----FRWGAPPHAGAGI 583

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R+VML+L   N+R  S+F
Sbjct: 584 GLERLVMLILKLGNIRLASMF 604


>gi|260914425|ref|ZP_05920894.1| lysine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631526|gb|EEX49708.1| lysine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 501

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 29/286 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V+++G +   R  G   F+ ++D  G  Q+    D+    +       W    ++ + G 
Sbjct: 63  VKVAGRIMTRRAMGKATFITLQDMSGRIQLYVARDNLPDGVYAEDVGTWDLGDIIGVKGT 122

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           +             T ++ +   ++E+L+ A   PLP        +  R++ R+LDL   
Sbjct: 123 LFKTK---------TNELTVRCTEVELLTKALR-PLPDKFHGLSDQETRYRQRYLDLISN 172

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           +   +  + R+++I  +R   I++ F+E  TP+L    P GA  R F+          Y 
Sbjct: 173 EESRRTFIIRSKVIAGIRDYFISKGFMEVETPMLQII-PGGASARPFITHHNALDVDMY- 230

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+++  
Sbjct: 231 LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNT 289

Query: 254 ENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDK 290
           E +LR +  +      V            F RI   DAI +YG DK
Sbjct: 290 EELLRKLAIDILGTTIVPYGEYEFDFGKPFERITMHDAILKYGADK 335



 Score = 42.0 bits (97), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536
           +++L   G EI +G    + +E   + F     +KE  ++    +      A + G+PP 
Sbjct: 410 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVTALEHGLPPT 469

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+ ML   A ++R+V LFP
Sbjct: 470 AGEGLGIDRLAMLFANAASIRDVILFP 496


>gi|225677864|gb|EEH16148.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 968

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 26/274 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSA-----CFEIAKS 64
           ++ V  VG  V     VH VR     ++F+  R      Q V    +        + A+ 
Sbjct: 153 NITVDLVGQEVMFRARVHHVRRMSSKLVFIVFRQQIITFQGVLAEKAGQVSTFMIQWAEH 212

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVF-------- 115
           +R   ++ + G +       +   I    +EL  +K+ ++   EE +P  V+        
Sbjct: 213 IRVGSIVKVKGKLSKSLVPVVGCTI--HDVELDIEKLHVIVRREEPVPFSVYEAELTTRE 270

Query: 116 -----GEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                G R +  +  R   R LDLR D        ++ + N     + ++ FIE  TP L
Sbjct: 271 EHTHDGRRNHILDKTRLSNRILDLRTDASQSIFRIQSAVSNLFHSALDSQGFIEIHTPKL 330

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             S+ E        S  ++ +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R
Sbjct: 331 QGSATESGASVFEVSYFSRAAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHR 388

Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
              E+  LD+EM+  E   + L  +++VL+ +F+
Sbjct: 389 HLTEYTGLDIEMAIDEHYHEALEVIDSVLKEIFK 422



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H  +++ +   + GI    +E+   G    F+ G PPH G   
Sbjct: 528 FDIFVRGQEIVSGGQRIHDEKILEKRMRDAGIDPLTMEDYLEG----FRWGAPPHAGAGI 583

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R+VML+L   N+R  S+F
Sbjct: 584 GLERLVMLILKLGNIRLASMF 604


>gi|66812996|ref|XP_640677.1| lysine-tRNA ligase [Dictyostelium discoideum AX4]
 gi|60468698|gb|EAL66700.1| lysine-tRNA ligase [Dictyostelium discoideum AX4]
          Length = 551

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 123/250 (49%), Gaps = 23/250 (9%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G V   R  G G++F DI   +   QV+ N  +       S   ++V  I+GL+  
Sbjct: 80  VSIAGRVLSKRAAGSGLVFYDITGEFNKVQVLVNKRAYA-----SCEEDYVK-INGLL-- 131

Query: 80  RSAETINANII-----TGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           R  + I A        TG++ L A ++ +LS     LP    G  + PE+ RF+ R+LD+
Sbjct: 132 RRGDIIGAKGTPGRSKTGELSLFATEVILLSPCLHMLPKAASGLTD-PET-RFRQRYLDM 189

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGS 190
              +++ KN + R+++I  +R  +    FIE  TP++   +    A+ FL   + +N   
Sbjct: 190 ICNESVKKNFIIRSKVIQGVRRYLDNLGFIEVETPMMNMIAGGAAAKPFLTHHNALNMDL 249

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  +  AP+ Y + L+  G DR ++I   FR+ED      P EF   +  M++ + +D+ 
Sbjct: 250 FMRI--APELYLKQLVVGGMDRVYEIGKQFRNEDIDHTHNP-EFTTCEFYMAYADYNDLY 306

Query: 251 NTMENVLRGV 260
              E +L+ +
Sbjct: 307 TMTEQLLQSI 316



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF----QCGMPPH 536
           +++L  N  EI +     +   V ++ F+    +K   ++    + + F    + G+PP 
Sbjct: 438 RFELFVNTKEICNAYTELNNPFVQIERFAEQAKAKAAGDDESMLIDKVFTTSLEYGLPPT 497

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR  ML+    N++EV LFP
Sbjct: 498 GGFGLGIDRFAMLMSDTYNIKEVILFP 524


>gi|284008433|emb|CBA74887.1| lysyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 504

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 143/340 (42%), Gaps = 33/340 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q+  + D     I      +W L   G ++  
Sbjct: 67  VSVAGRMITRRIMGKASFATLQDMGGRIQIYISRDDLPEGIYNEQFKKWDL---GDILGV 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL   D   
Sbjct: 124 KGKLFKTK--TGELTIHGYEVYLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDRSR 180

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  + R+R+++++R  M++++F+E  TP++        AR F+          Y L  AP
Sbjct: 181 QTFITRSRVLSALRNFMVSKDFMEVETPMMQVIPGGAAARPFITHHNALDIDMY-LRIAP 239

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E + R
Sbjct: 240 ELYLKRLVVGGFERVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYKDLIVLTEELFR 298

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
            V +E      V              +YG    D   P     + E  V  ++R  + + 
Sbjct: 299 TVTQEVLGTTQV--------------KYGEHLFDFGQPFSKMTMKEAIV--KYRAETVLA 342

Query: 319 SVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351
            ++   +  AI       P KG G  R  C+     A S 
Sbjct: 343 DLDDMTKATAIAKSLNIEPEKGWGLGRLQCEIFEAVAESH 382



 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++MLL  +  +R+V LFP
Sbjct: 463 ALEHGLPPTAGLGIGIDRMIMLLTDSHTIRDVILFP 498


>gi|320547173|ref|ZP_08041467.1| asparagine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320448160|gb|EFW88909.1| asparagine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 448

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 115/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+          +  F   K +
Sbjct: 15  VGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKYGEEEGTEKFNTIKHL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + I G+V   S             EL    ++I+  +E+ P+     +E+     
Sbjct: 75  SQETSILITGIVKEDSRSKFG-------YELDVTDLKIVGHSEDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDHRHLWLRSRKQMAIMQIRNAIIYATYDFFDKNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAI 295



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ K   E  F    R +  G  PH G   G
Sbjct: 364 LAPEGYGEIIGGSVREDDYDTLVAKMDALGMDKS--EYEFYLDLRKY--GSVPHAGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|328675335|gb|AEB28010.1| Lysyl-tRNA synthetase (class II) [Francisella cf. novicida 3523]
          Length = 560

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 137/307 (44%), Gaps = 27/307 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACF 59
           RY   +  +L   D     +L+G V   R  G   F+ ++D+ G  QV    ++     +
Sbjct: 106 RYADKTKQELEELDNKQQYKLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPEGQY 165

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E  K+      LC  G ++  S      N  TG++ + A   EIL+ A   PLP      
Sbjct: 166 ETFKN------LCDLGDIVGISGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHGL 216

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGA 177
             + +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++        A
Sbjct: 217 ADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDKLDFMEVETPMMHVLQGGAAA 276

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F           Y L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  L
Sbjct: 277 KPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTML 334

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGT 288
           +  M++ + +D+++  E++L  + +E      +            + RI   D+I +Y  
Sbjct: 335 EFYMAYADYNDLMDLTEDMLSKLVQEVIGSEVLEYGEYKINFGGKYERISMVDSIVKYND 394

Query: 289 D--KPDL 293
           D  K DL
Sbjct: 395 DITKEDL 401



 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VM L  ++++R+V LFP
Sbjct: 519 RALEYGLPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 555


>gi|301169952|emb|CBW29556.1| lysine tRNA synthetase, inducible [Haemophilus influenzae 10810]
          Length = 502

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 29/293 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69
           + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    +       W    
Sbjct: 57  LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGD 116

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           ++ + G +             T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 117 IIGVKGTLFKTK---------TNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186
           +LDL   +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+     
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNA 225

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  AP+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ + 
Sbjct: 226 LDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADY 283

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
            D+++  E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 284 HDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336



 Score = 41.2 bits (95), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVTAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|289450735|ref|YP_003475258.1| lysine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289185282|gb|ADC91707.1| lysine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 660

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 138/322 (42%), Gaps = 35/322 (10%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SA 57
           RTHSC ++     +  G  V+++G +   R  G + F D+ D +G  Q+    D     A
Sbjct: 42  RTHSCEEICRDFANLEGKRVKIAGRIMSKRGMGKVSFCDLNDKFGHIQIFTKIDLLGEEA 101

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFG 116
             E  K    +WV  IDG VM             G+I +      +LS +   LP    G
Sbjct: 102 YKEWQKLDIGDWV-GIDGEVMRTQ---------RGEISIRNYGYVLLSKSIRPLPEKFHG 151

Query: 117 EREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
            ++     R++ R+LDL  +  + +   KR+ II ++R  +   +F+E  TPIL      
Sbjct: 152 LQDM--DTRYRRRYLDLIVNPEVRQTFAKRSIIIRTLRNYLDNIDFLEVETPILNVIPGG 209

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+          Y L  AP+ Y + L+  G DR ++I   FR+E   +   P EF
Sbjct: 210 AAARPFITHHNAMNIDLY-LRIAPELYLKRLIVGGMDRVYEIGRQFRNEGMDTKHNP-EF 267

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRR 285
             L++  +F +   ++   E ++           TV+           F R+   DA+ +
Sbjct: 268 TLLELYQAFTDYKGMMELTETLIYECAMAACGKTTVTWRGVDVDLKPPFRRLTMRDAVLQ 327

Query: 286 Y-GTDKPDLRN-PIIMHNVTEH 305
           Y G D   +++ P  +   TEH
Sbjct: 328 YSGVDFDQIKDLPAAVAVATEH 349



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 29/43 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + G+PP GG+  GIDR+ MLL  ++++R+V LFP  +   D
Sbjct: 455 ALEYGLPPTGGMGMGIDRLTMLLTDSESIRDVLLFPTMKPLSD 497


>gi|229844834|ref|ZP_04464972.1| lysyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229812215|gb|EEP47906.1| lysyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 502

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 126/286 (44%), Gaps = 29/286 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V+++G +   R  G   F+ I+D  G  Q+    D+    +       W    ++ + G 
Sbjct: 64  VQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGDIIGVKGT 123

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           +             T ++ +   ++++L+ A   PLP        + +R++ R+LDL   
Sbjct: 124 LFKTK---------TNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISN 173

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+          Y 
Sbjct: 174 EESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVDMY- 231

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+++  
Sbjct: 232 LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNT 290

Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
           E +LR +  +  +   V            F RI   DA  +YG DK
Sbjct: 291 EELLRKLAIDILSTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336



 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536
           +++L   G EI +G    + +E   + F     +KE  ++    +      A + G+PP 
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDDDFVVALEHGLPPT 470

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+ ML   A ++R+V LFP
Sbjct: 471 AGEGLGIDRLAMLYANASSIRDVILFP 497


>gi|309751146|gb|ADO81130.1| Lysyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 502

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 29/293 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69
           + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    +       W    
Sbjct: 57  LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGD 116

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           ++ + G +             T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 117 IIGVKGTLFKTK---------TNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186
           +LDL   +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+     
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNA 225

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  AP+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ + 
Sbjct: 226 LDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADY 283

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
            D+++  E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 284 HDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336



 Score = 40.8 bits (94), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|314972315|gb|EFT16412.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
          Length = 1081

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 113/268 (42%), Gaps = 26/268 (9%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+     G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+      +  R
Sbjct: 626 HQPGDVVTELTGQEMTVSGRVDACRDHGGVIFIDLFDWTGACQLVMERDAVGVNNLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV   +  T+ A+   G + L       L+     PLP           + 
Sbjct: 686 HT-VSLGDHLV---ATGTVGAS-RNGTLSLKVTSWR-LAAKSLRPLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
           + R+LDL      RD L      R+  I ++R  +++ +FIE  TPIL T      AR F
Sbjct: 740 RQRYLDLIVNPGARDQLR----ARSNAIRAVRETLLSHDFIEVETPILQTIHGGANARPF 795

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD-- 238
                      Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+  
Sbjct: 796 RTHINAYDLELY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAY 853

Query: 239 ------MEMSFVEQDDILNTMENVLRGV 260
                 ++M  + Q+ IL+   N + G 
Sbjct: 854 QAYGDYVQMRHLTQEMILSAARNAIGGT 881



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VMLL  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMLLTNA-SIRETISFPL 1075


>gi|149183168|ref|ZP_01861616.1| asparaginyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148849103|gb|EDL63305.1| asparaginyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 371

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 100/238 (42%), Gaps = 28/238 (11%)

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AKS+  E  L + G++   S             E+  + IE++  + + P+     +E+ 
Sbjct: 1   AKSITQETSLYVTGVIQEDSRSPFG-------YEMQVKDIEVIHESVDYPI---TPKEHG 50

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                  R L LR    H  +  R  II +       E F++   PILT S+PEG  +  
Sbjct: 51  TEFLMDNRHLWLRSRRQHAVMKVRNEIIRATYEFFNKEGFVKVDPPILTGSAPEGTSELF 110

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + ++  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 111 HTKYFEEDAY--LSQSGQLYMEA-AAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEM 167

Query: 242 SFVEQDDILNTME----NVLRGVFE-----------EFSNGNTVSNNFLRICYDDAIR 284
           +F E +D L   E    +V++ V E           + S    +   F RI YD+A++
Sbjct: 168 AFYEHEDSLKVQEEYVSHVVQSVLENCKLDLERLGRDTSKLENIKAPFPRITYDEAVK 225


>gi|296121103|ref|YP_003628881.1| lysyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296013443|gb|ADG66682.1| lysyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 487

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 125/258 (48%), Gaps = 17/258 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSA--CFEIAKSVRSEWVLCID 74
           G  VR++G V R    G + F  I+D+ G  QV ++  D A   +E+ +  ++  +L +D
Sbjct: 52  GEVVRVAGRVMRWSDSGKLRFGTIQDYTGRIQVMISKKDIAEDQWELMECFQTGDLLGVD 111

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G +   +         TG+I + A K+ +L  +   P   +   +  E++  + R+LDL 
Sbjct: 112 GTLRRTN---------TGEISVFATKLHVLGKSLSQPPEKWHGLQDIETL-LRQRYLDLI 161

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
             D +   +++R +II+S+R  +  E F E  TP+L A +    AR F+          Y
Sbjct: 162 YNDGVLARMLRRLKIIDSIRQTLRGEEFFEVETPVLHAIAGGAAARPFITHHNALDIPLY 221

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + + + LM  G +R ++I   FR+E   +   P EF  +++  ++ + + ++  
Sbjct: 222 -LRIALELHLKRLMVGGIERVYEIGRVFRNEGVDATHNP-EFTMIELYQAYADYNIMMEL 279

Query: 253 MENVLRGVFEEFSNGNTV 270
            E ++    +  ++G TV
Sbjct: 280 AEKIISEACKAANDGKTV 297



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 3/89 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN--VGISKEVVENRFG-GLYRAFQCGMPP 535
           A +++L  +G E+A+     +   +    F     G+++E    +      RA + GMP 
Sbjct: 393 AERFELFIHGLELANAYTELNDPRLQEDLFKTQLAGLAEEDSMAKMDHDFVRALKVGMPC 452

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GG+  GIDR+VMLL   K +R+V  FP+
Sbjct: 453 AGGMGIGIDRLVMLLTNTKTIRDVIFFPL 481


>gi|195154100|ref|XP_002017960.1| GL17018 [Drosophila persimilis]
 gi|194113756|gb|EDW35799.1| GL17018 [Drosophila persimilis]
          Length = 533

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 36/263 (13%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G VH  R  G   FL +R      Q        C      + S+ ++   G +   S   
Sbjct: 93  GRVHTSRSKGKQCFLILRQQSSTVQ--------CILAVGDIISKQMVKFAGNIPKESIID 144

Query: 85  INANIIT----------GQIELSAQKIEILSVAE-ELPLPVFGEREYPES---------- 123
           I A  ++            +EL  ++I ++S A+ +LPL +  +   PE+          
Sbjct: 145 IQAKPVSVPNKIESCTEQTLELCVEQIFVISQAKAQLPLQI-EDASRPENADDDGLNIRV 203

Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   R LDLR             +    R  +  + F E  TP + +++ EG  + 
Sbjct: 204 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAASEGGANV 263

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S     ++ A  Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF  LD+E
Sbjct: 264 FTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLE 321

Query: 241 MSF-VEQDDILNTMENVLRGVFE 262
           M+F     ++L+T+ N    +F+
Sbjct: 322 MAFKYHYHEVLHTIGNTFTAIFK 344



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 7/85 (8%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH---GG 538
           YD+   G EI SG  R H  E +++   + GI   ++  +        + G+PP    GG
Sbjct: 445 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIG--LIPPKLRHTSSPSRYGLPPRTPAGG 502

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           I  G++R+VML LG  N+R+ S+FP
Sbjct: 503 I--GMERVVMLYLGLDNIRKTSMFP 525


>gi|121703221|ref|XP_001269875.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus clavatus NRRL 1]
 gi|119398018|gb|EAW08449.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus clavatus NRRL 1]
          Length = 958

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 28/274 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHY----GITQVVANPDS-ACFEIAKS 64
           ++  ++VG  V  +  +H VR     ++FL  R       G+   V    S A  + A+ 
Sbjct: 143 NISAANVGQEVLFTTRLHIVRRMSSKLVFLIFRQQLTTFQGVLHEVPGAKSIAMIQWAEH 202

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP----------- 113
           +R   ++ + G+V +     +  +I    +EL  ++I ++ V  E P+P           
Sbjct: 203 LRLGSIVHVRGIVQAPEVPVLGCSI--HDVELRIEQIHLV-VHREEPVPFSVYEAEIRTA 259

Query: 114 ----VFGEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
               V G R +  +  R   R LDLR  T       ++ + N  R  +  + FIE  TP 
Sbjct: 260 EEERVEGRRSHISDRTRLNNRLLDLRTPTAQSIFRIQSALSNIFRSSLDEQGFIEIHTPK 319

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L  S+ E        +   + +F A  Q+PQ  KQ+ +A+ F R ++I   FR E+  + 
Sbjct: 320 LQGSATESGASVFQVNYFGRDAFLA--QSPQLAKQMCIAADFGRVYEIGAVFRAENSNTH 377

Query: 229 RLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVF 261
           R   E+  LD+EM+  E   ++L  ++ V++ + 
Sbjct: 378 RHLTEYTGLDLEMAIEEHYHEMLEVLDAVIKNIL 411



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 10/114 (8%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H   ++ +     GI+ E++++   G    F+ G PPH G   
Sbjct: 519 FDIFIRGQEIVSGGQRIHDPHMLEENMLRWGINPELMDDYMEG----FRWGAPPHAGAGV 574

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G++R++MLLL   N+R  SLFP            P+   V QLR      VE P
Sbjct: 575 GLERLLMLLLKLGNIRLASLFPRDPK------SFPAKPPVLQLRHPESSTVEPP 622


>gi|225572779|ref|ZP_03781534.1| hypothetical protein RUMHYD_00970 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039836|gb|EEG50082.1| hypothetical protein RUMHYD_00970 [Blautia hydrogenotrophica DSM
           10507]
          Length = 651

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 131/288 (45%), Gaps = 36/288 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F  ++D  G  Q     DS   E  K  +   V  I G+ 
Sbjct: 59  GKTVSVAGRMMSKRVMGKASFCHVQDLRGQIQSYVARDSLGEEAYKEFKKMDVGDIVGI- 117

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---PESIRFKYRFLDLR 134
                E       TG+I + A ++ +LS +    L V  E+ +      +R++ R+ DL 
Sbjct: 118 ---KGEVFRTK--TGEISIHAAEVTLLSKS----LQVLPEKYHGLTNTDLRYRQRYTDLI 168

Query: 135 RD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +  +    +KR++II+S+R  + A+ F+E  TP+L A++   A      +R  +  F A
Sbjct: 169 MNPEVKDTFIKRSKIISSIRKYLDAQGFMEVETPMLVANAGGAA------ARPFETHFNA 222

Query: 194 LPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           L +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 223 LDEDFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYH 281

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            +++  EN+ R V +E      ++ N         F RI   DA+++Y
Sbjct: 282 GMMDLTENLYRHVAQEVLGTTKITYNGIEMDLGKPFERITMVDAVKKY 329



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+ MLL  +  +R+V LFP
Sbjct: 456 ALEIGMPPTGGIGFGIDRMCMLLTNSAAIRDVLLFP 491


>gi|48478484|ref|YP_024190.1| asparaginyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|48431132|gb|AAT43997.1| asparaginyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 427

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 13/252 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V + GWV+R+R  G I F+ IRD   I Q VA+  S+  E    + S   L I+  
Sbjct: 13  IGKTVTIHGWVYRIRSSGRITFIIIRDSTDIVQCVAS--SSLGERYNDISS---LTIESS 67

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +      + +   +TG  E+     +I    E  P+     ++  +      R L LR  
Sbjct: 68  LEVTGQVSKDERAVTG-YEIKISDFKIYQRNEFFPIT----KDKSDEFLLDNRHLWLRSR 122

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R+ +  +         + +   P++ +++ EG          +   +  L Q
Sbjct: 123 EFTSILKIRSTVFKAFADFFYNNGYYQVQGPMMVSTATEGGATLFKLKFFDDDVY--LTQ 180

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y + ++ S  ++ F IAP FR E  R+ R   E++  + E +++  DD++N  E +
Sbjct: 181 SSQFYLETMIFS-LEKVFTIAPSFRAEKSRTRRHLSEYWHAEGEAAWLHNDDMMNVEEKM 239

Query: 257 LRGVFEEFSNGN 268
           +  +  E  N N
Sbjct: 240 IEYIVSEVLNKN 251


>gi|302387990|ref|YP_003823812.1| tRNA synthetase class II (D K and N) [Clostridium saccharolyticum
           WM1]
 gi|302198618|gb|ADL06189.1| tRNA synthetase class II (D K and N) [Clostridium saccharolyticum
           WM1]
          Length = 441

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 15/259 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           +T    +LG + +G  V++ G ++++R      F+ +R    + Q + + + + F +++ 
Sbjct: 11  KTVEAEELG-NHIGENVQIHGSIYKIRTMSDFAFVLLRTKRNVVQCIYSAEFSGFSLSEI 69

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
                V+    +     ++T          +L   KIE LS  EE    V   +    S+
Sbjct: 70  TEESCVIVTAHVKAEERSKT--------GYDLQMIKIETLSWPEEPSPVVINNKRVDASM 121

Query: 125 R--FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                +R L LR +        +  I   +R  +  E F E  TP +  +  EG  +   
Sbjct: 122 ETLLNFRPLTLRNERERAIFKLQEGITCGIREFLKQERFTEVHTPKIVYAGAEGGANIFC 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            +   + ++  L Q+PQ YKQ+ M   ++R F+IAP FR E   + R   E+  +D EM 
Sbjct: 182 LNYFGKEAY--LAQSPQFYKQM-MVGVYERVFEIAPVFRAEKHDTSRHLNEYTSVDFEMG 238

Query: 243 FVEQ-DDILNTMENVLRGV 260
           +++  +DI+     +LR V
Sbjct: 239 YIDSFEDIMQMETMMLRHV 257



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 4/86 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +   +DL+  G EI +GG R H  +  +      G++ E+    F       + GMPPHG
Sbjct: 352 ETLSFDLLFRGLEITTGGQRIHKYKEQIAKMEYRGMNAEL----FDTYLMMHKYGMPPHG 407

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+  G++R    LL   NVR  +LFP
Sbjct: 408 GLGLGLERFTGKLLEQDNVRLSTLFP 433


>gi|262274919|ref|ZP_06052730.1| lysyl-tRNA synthetase (class II) [Grimontia hollisae CIP 101886]
 gi|262221482|gb|EEY72796.1| lysyl-tRNA synthetase (class II) [Grimontia hollisae CIP 101886]
          Length = 504

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 150/310 (48%), Gaps = 33/310 (10%)

Query: 5   RTHSCGDLGVSDVG--SFVRLSGWVHRVRPHGGII-----FLDIRDHYGITQVVANPDSA 57
           R H   DL  ++ G  S   L    H+V   G I+     FL ++D  G  Q  A+ D  
Sbjct: 37  REHKAADLQ-AEFGDKSKEELEALDHKVSIAGRIMAKRGPFLALQDVSGRIQAYASKD-- 93

Query: 58  CFEIAKSVRSEWV-LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              + K ++ ++  L I  ++  + A   +     G + ++ ++ ++L+ A   PLP   
Sbjct: 94  ---VQKELKEQYQGLDIGDIIGVKGALHKSGK---GDLYVNMEEYQLLTKALR-PLPEKF 146

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
                + +R++ R++DL  +   +N  K R+++I+++R  M +++F+E  TP++      
Sbjct: 147 HGLTDQELRYRQRYVDLIVNEDSRNTFKVRSKLISAIRRYMESKDFMEVETPMMQVIPGG 206

Query: 175 EGARDFLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
             AR F+   + ++Q  F  +  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 207 AAARPFITHHNALDQQMFLRI--APELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPE 263

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIR 284
           F  ++  M++ + +D+++  E++LR V  E     ++            + R+   +AI+
Sbjct: 264 FTMIEFYMAYADYNDLIDLTEDMLRTVALEVLGQTSMPYGEHTVDFGGKYARMTMLEAIK 323

Query: 285 RYGTDKPDLR 294
            Y  D  D++
Sbjct: 324 HYNPDHADIQ 333



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ ML      +R+V LFP
Sbjct: 459 ALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFP 494


>gi|238883499|gb|EEQ47137.1| asparaginyl-tRNA synthetase [Candida albicans WO-1]
          Length = 552

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 11/240 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + GWVHR+R   G+ F+ +RD  G  Q V   D A  +  + +  E  + I G V+S+
Sbjct: 130 VLVQGWVHRLRVQKGLAFITLRDGTGYLQCVLTGDLAKAKQTQELTIESTVAIKG-VISK 188

Query: 81  SAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
             E   A    G +EL A   +I+++A   +E       E   P ++    R L LR +T
Sbjct: 189 LPEGKTA---PGGVELKADHYQIIALAPGGDESFTNKVQENADP-NLLLDQRHLALRGET 244

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           L   +  R     ++R     E   E + P +  +  EG           + ++  L Q+
Sbjct: 245 LSAVMKVRAAYSAAIRRFFAEEGLTEVTPPCMVQNQVEGGSTLFKLDYYGEEAY--LTQS 302

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  +AS  D Y  I   FR E   + R   E+  ++ E+ F+  +D+L  +E +L
Sbjct: 303 SQLYLETCLASLGDVYC-IQESFRAEKSHTRRHLSEYTHIEAELVFITFEDLLTHLEKLL 361


>gi|331268358|ref|YP_004394850.1| lysyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329124908|gb|AEB74853.1| lysyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 510

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 18/257 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCID 74
           G  V ++G +   R HG   F DIRD YG  Q+    D    E  K  ++  +   + I 
Sbjct: 69  GKNVTVAGRLMSKRVHGKAGFSDIRDRYGKIQLYIKIDDVGEEKLKEYKTFDIGDFVSIT 128

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G V             TG++ L     ++L+ + + PLP          +R++ R++DL 
Sbjct: 129 GTVFKTK---------TGEVTLHILDFKLLTKSLK-PLPEKFHGLKDPDLRYRQRYVDLI 178

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
             + + +  +KRT II ++R  +    F+E  TPIL+  +    A+ F+          Y
Sbjct: 179 MNEDVRETFMKRTAIIKAIREFLDNREFLEVETPILSPIAGGAAAKPFITHHNALDIDMY 238

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF++ ++I   FR+E       P EF  +++  ++ + +D++  
Sbjct: 239 -LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP-EFTAIELYEAYADYNDMMEI 296

Query: 253 MENVLRGVFEEFSNGNT 269
            EN++  V E+  NG T
Sbjct: 297 TENMVAYVCEKV-NGTT 312



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M L  + ++R+V LFP
Sbjct: 469 ALEIGMPPTGGLGIGIDRLIMFLTDSSSIRDVILFP 504


>gi|148677755|gb|EDL09702.1| asparaginyl-tRNA synthetase, isoform CRA_b [Mus musculus]
 gi|148677756|gb|EDL09703.1| asparaginyl-tRNA synthetase, isoform CRA_b [Mus musculus]
          Length = 515

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 117/289 (40%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 92  GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 138

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 139 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 198

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ I    R       + E +TP L  +  EG           
Sbjct: 199 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 258

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   EF  ++ E  F+  +
Sbjct: 259 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 315

Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283
           D+LN +E+        VL+      V+E   N       F R+ Y DAI
Sbjct: 316 DLLNRLEDLVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAI 364



 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 432 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 487

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  +L   ++R+V L+P     C
Sbjct: 488 ERFLSWILNRYHIRDVCLYPRFLQRC 513


>gi|72389957|ref|XP_845273.1| lysyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62359254|gb|AAX79696.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70801808|gb|AAZ11714.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 634

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 130/265 (49%), Gaps = 16/265 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAKSVRSEWVL 71
           G  +     R++G +  +R  G ++F  +R      Q+V +  +    +  K +R+   L
Sbjct: 80  GERETSVTARVAGRITSLRDMGKMLFATVRSSGVDLQLVVHVGEHFTRDCLKQLRAS--L 137

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLP-VFGEREYPES-IRF 126
            +  +V    AE I   +  G++ L+A ++E+L+     +++  P + G  +  ++ +R+
Sbjct: 138 RVGDIV---GAEGIPCRMQRGELSLAASRVEVLAPYVCRDQVVCPDLRGFTQLQDNDVRY 194

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           +YRF+D+  + ++   I KR  ++ S+R  +   +F+E  TPIL T +S   A+ F+   
Sbjct: 195 RYRFVDMMTNRSVIDTIRKRHTVLQSLREYLDMRHFVEVETPILHTVASGANAKPFVTHH 254

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             N    + L  AP+ Y +  +  G +R ++I   FR+ED      P EF   +   ++ 
Sbjct: 255 NANNADLF-LRVAPELYLKQCVVGGLERVYEIGKVFRNEDADRSHNP-EFTTCEFYAAYH 312

Query: 245 EQDDILNTMENVLRGVFEEFSNGNT 269
             +D++   E++ R +    +NG T
Sbjct: 313 TYEDLITMTEDIFRHLALR-ANGTT 336



 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           ++ Q G+PP  G   GIDR+VMLL G+  +R+  +FP+
Sbjct: 501 KSLQVGLPPTAGWGMGIDRVVMLLSGSSTIRDGIIFPL 538


>gi|45657877|ref|YP_001963.1| asparaginyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|59798558|sp|Q72QT4|SYN_LEPIC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|45601118|gb|AAS70600.1| asparaginyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 435

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 24/266 (9%)

Query: 16  DVGSFVR----LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSE 68
           D+G +V     + GWVH +R      FL +R+   I QV+A  +      F+  K +R E
Sbjct: 11  DLGKYVDQKVVIQGWVHGIRGSNARQFLSLRNSGKILQVLAEKEILGEEVFQTVKHLRQE 70

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G ++      I         EL  + I+I+  +E  P+     +E+        
Sbjct: 71  TSVTVIGNLVKNEKSPIG-------FELVMESIQIVGESENYPIT---PKEHGIDFLISQ 120

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R L LR       +  R  +  ++R      +F+   TPILT S  E A         + 
Sbjct: 121 RHLWLRSSKQLAILRVRDNLSFAIRKYFHERDFLLIDTPILTGSVGESAGTLFSTEYFDL 180

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G+ Y L Q  Q Y +  + +  ++ F   P FR E  ++ R   EF+ ++ E++F    +
Sbjct: 181 GNAY-LAQTGQLYLETAIFA-HNKVFCYGPTFRAEKSKTRRHLTEFWMVEAEVAFATHAE 238

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNF 274
            L   E+ ++ V +E     TV N+F
Sbjct: 239 NLKLQEDFVKTVIKE-----TVQNSF 259


>gi|319897323|ref|YP_004135519.1| lysyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432828|emb|CBY81193.1| lysyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 502

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 29/293 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69
           + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    +       W    
Sbjct: 57  LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGD 116

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           ++ + G +             T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 117 IIGVKGTLFKTK---------TNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186
           +LDL   +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+     
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNA 225

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  AP+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ + 
Sbjct: 226 LDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADY 283

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
            D+++  E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 284 HDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336



 Score = 41.2 bits (95), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVTAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|308187993|ref|YP_003932124.1| lysyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308058503|gb|ADO10675.1| lysyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 506

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 27/295 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L   G 
Sbjct: 64  LGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL---GD 120

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +
Sbjct: 121 ILGARGKLFRTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
              +N  K R++I+  +R  M+  +F+E  TP++    P GA  R F+          Y 
Sbjct: 178 EESRNTFKIRSQIMAGIRQFMVGRDFMEVETPMMQVI-PGGASARPFITHHNALDIDMY- 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           L  AP+ Y + L+  GFDR F+I   FR+E   PR +    EF  +++ M++ +  D++ 
Sbjct: 236 LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHN---PEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295
             E++ R + ++      V            F ++   +AI++Y   TD  DL +
Sbjct: 293 LTESLFRTLAQDVLGSTVVPYGEQEFDFGKPFEKLTMREAIKKYRPETDLADLED 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|116789233|gb|ABK25168.1| unknown [Picea sitchensis]
          Length = 566

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 40/272 (14%)

Query: 21  VRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD-----SACFEIAKSVRSEWVLCID 74
           + + G  H +R     + FL +R+     Q V N +         +    +  E ++ ++
Sbjct: 119 ILVRGRAHAIRGVSSKMAFLVVREAGYTVQCVLNVNPGVVSKGMVKFVTGLSKESIVDVE 178

Query: 75  GLVMSRSAETINANIITG---QIELSAQKIEILSVAE-ELPL----PVFGEREYPES--- 123
           G+V      T+    ITG   Q+E+  +K+  +S ++  LP+        E+E+ ++   
Sbjct: 179 GIV------TVPNIAITGASQQVEIHVRKVYCVSKSQPTLPINLEDAARSEKEFEKAEQT 232

Query: 124 ----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR--MIAENFIECSTPILTA 171
                      R  YR LDLR  T     + R +   SM  R  +I+E F+E  TP L A
Sbjct: 233 GEHVVRVGQDTRLNYRVLDLR--TPANQGIFRVQSYVSMLFRQFLISEGFVELHTPKLIA 290

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
            + EG           +G    L Q+PQ +KQ+ + + F R F+I P FR ED  + R  
Sbjct: 291 GASEGGSSVFKLD--YKGQPACLAQSPQLHKQMAICADFGRVFEIGPVFRAEDSFTHRHL 348

Query: 232 GEFYQLDMEMSFVEQD-DILNTMENVLRGVFE 262
            EF  LD+EM   E   ++L+ ++ +   +F+
Sbjct: 349 CEFTGLDLEMEIKEHYFEVLDILDKLFITIFD 380



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H  E + +    +GI      N       +F+ G  PHGG+  
Sbjct: 481 FDVFIRGEEIISGAQRVHEPEFLTKRAKELGIDV----NTISTYIDSFRWGAVPHGGLGV 536

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML     N+R+ SLFP
Sbjct: 537 GLERVVMLFCALNNIRKTSLFP 558


>gi|293390165|ref|ZP_06634499.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290950699|gb|EFE00818.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 502

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 19/281 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ I+D  G  Q+    D+    + K     W L   G ++  
Sbjct: 64  VTVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGHWDL---GDIVGI 120

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     T ++ + A ++++L+ A   PLP        + +R++ R+LDL   +   
Sbjct: 121 KGSLFKTK--TDELTVKATEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISNEESR 177

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  + R++++  +R   +++ F+E  TP+L        AR F+          Y L  AP
Sbjct: 178 RTFIIRSKVVAGIREYFLSKGFMEVETPMLQVIPGGAAARPFVTHHNALDVDMY-LRIAP 236

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+++  E +LR
Sbjct: 237 ELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNTEELLR 295

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
            +  +      V            F RI   +AI +YG++K
Sbjct: 296 KLAIDILGTTIVKYGDLEFDFGKPFERITLHNAIIKYGSEK 336



 Score = 40.4 bits (93), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ ML   A ++R+V LFP
Sbjct: 462 ALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|195382876|ref|XP_002050154.1| GJ20350 [Drosophila virilis]
 gi|194144951|gb|EDW61347.1| GJ20350 [Drosophila virilis]
          Length = 537

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 117/269 (43%), Gaps = 26/269 (9%)

Query: 15  SDVGS-FVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD---SACFEIAKSVRSEW 69
           S VG   V + G VH  R  G   FL +R      Q ++A  D       + A ++  E 
Sbjct: 88  SHVGKGLVWVRGRVHTSRSKGKQCFLILRQQSSTVQCILAVGDIISKQMVKFAGNIPKES 147

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES----- 123
           ++ I    +S    T   +     +EL  ++I ++S A+ +LPL +  +   PE+     
Sbjct: 148 IIDIQAKPVS--VPTRIESCTEQLLELCVEQIFVISQAKAQLPLQI-EDASRPENADEAD 204

Query: 124 ---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                     R   R LDLR             +    R  +  + F E  TP + +++ 
Sbjct: 205 GLNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPKIISAAS 264

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EG  +    S     ++  L Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF
Sbjct: 265 EGGANVFTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEF 322

Query: 235 YQLDMEMSF-VEQDDILNTMENVLRGVFE 262
             LD+EM+F     ++L+T+ N    +F+
Sbjct: 323 VGLDLEMAFKYHYHEVLHTIGNTFTAIFK 351



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++   + GI       +      +F+ G PPH G   
Sbjct: 452 YDMFMRGEEILSGAQRIHDPEYLIERAKHHGIDT----TKIAAYIESFRYGCPPHAGGGI 507

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 508 GMERVVMLYLGLDNIRKTSMFP 529


>gi|186681358|ref|YP_001864554.1| asparaginyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186463810|gb|ACC79611.1| asparaginyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 463

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 127/307 (41%), Gaps = 55/307 (17%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLVM 78
           ++ GWV   R   G  F+++ D   +   QVV N D   +E I K + +   +   G+++
Sbjct: 20  QVQGWVRTKRESKGFAFIEVNDGSSLANLQVVINQDLPDYEAILKKLNTGAAVEATGVLV 79

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                   A++  GQ IEL A+ +++   A+    P+  +R    S  F      LR  T
Sbjct: 80  --------ASLGKGQRIELKAESVKVYGEADPDTYPLQKKRH---SFEFLRTIGHLRSRT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSRV 186
                V R R   S       +   F+   TPI+TAS  EGA +           +P   
Sbjct: 129 NSFGAVFRVRNACSTAIHQFFQQRGFLWVHTPIITASDCEGAGELFSVTSLDLKNIPRTE 188

Query: 187 NQG-----SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           NQ       F+A P       Q +  +MA  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 NQAVDYSQDFFAKPTYLTVSGQLEAEVMAMAFSNVYTFGPTFRAENSNTSRHLAEFWMVE 248

Query: 239 MEMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRI 277
            EM+F + +  ++  E  L+ +F+          EF N            N ++N F R+
Sbjct: 249 PEMAFCDLEGDMDLAEAFLKHIFKYVLETCPEDMEFFNERIDKSVLATAENIINNQFERL 308

Query: 278 CYDDAIR 284
            Y +AI+
Sbjct: 309 TYTEAIK 315


>gi|219275596|ref|NP_081626.2| asparaginyl-tRNA synthetase, cytoplasmic isoform 2 [Mus musculus]
 gi|148677757|gb|EDL09704.1| asparaginyl-tRNA synthetase, isoform CRA_c [Mus musculus]
          Length = 558

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 117/289 (40%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 135 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 181

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 182 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 241

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ I    R       + E +TP L  +  EG           
Sbjct: 242 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 301

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   EF  ++ E  F+  +
Sbjct: 302 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 358

Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283
           D+LN +E+        VL+      V+E   N       F R+ Y DAI
Sbjct: 359 DLLNRLEDLVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAI 407



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 475 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  +L   ++R+V L+P     C
Sbjct: 531 ERFLSWILNRYHIRDVCLYPRFLQRC 556


>gi|31127138|gb|AAH52849.1| Asparaginyl-tRNA synthetase [Mus musculus]
          Length = 548

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 117/289 (40%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 171

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 172 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 231

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ I    R       + E +TP L  +  EG           
Sbjct: 232 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 291

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   EF  ++ E  F+  +
Sbjct: 292 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 348

Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283
           D+LN +E+        VL+      V+E   N       F R+ Y DAI
Sbjct: 349 DLLNRLEDLVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAI 397


>gi|26346633|dbj|BAC36965.1| unnamed protein product [Mus musculus]
          Length = 547

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 117/289 (40%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 124 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 170

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 171 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 230

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ I    R       + E +TP L  +  EG           
Sbjct: 231 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 290

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   EF  ++ E  F+  +
Sbjct: 291 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 347

Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283
           D+LN +E+        VL+      V+E   N       F R+ Y DAI
Sbjct: 348 DLLNRLEDLVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAI 396



 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 464 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 519

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  +L   ++R+V L+P     C
Sbjct: 520 ERFLSWILNRYHIRDVCLYPRFLQRC 545


>gi|300121274|emb|CBK21654.2| unnamed protein product [Blastocystis hominis]
          Length = 723

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 33/274 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVLC 72
           +G  V + G    V   G   F+ +R H    Q           A    A  +  E ++ 
Sbjct: 158 IGEEVLIRGRAFNVNHKGKCCFIILRQHVDSVQCCLFQGGAISKAMVNYAGKIPKESIID 217

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG--------------- 116
           I G+V  +  ET   +     +E+S QK+ ++S V  ELP  +                 
Sbjct: 218 IYGIV--QKVETPIESATFKNVEISVQKVFVVSRVKVELPFQLDSAMRTDAEIAANEALD 275

Query: 117 --EREY----PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
             +R++    P++ R  YR++DLR       +   + +    R  ++  +F+E  TP + 
Sbjct: 276 EKDRKFITVNPDT-RLDYRWIDLRTPCNQAIVRLSSAVCLLFREYLLQNDFVEIHTPKIN 334

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA-SGFDRYFQIAPCFRDEDPRSDR 229
             + EG  +         GS   L Q+PQ YKQ+  A + F+R F+I P FR E+  + R
Sbjct: 335 PGTSEGGSNVFKLDYF--GSQACLAQSPQLYKQMTTACADFERVFEIGPVFRAENSNTHR 392

Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
              EF  LDMEM+  E   + +N + N+   +F+
Sbjct: 393 HLTEFVGLDMEMTIKEHYYEAVNMIANMFVYIFD 426



 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 4/91 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E++ +     GIS E +        ++F  G  PH G   
Sbjct: 527 YDIFIRGEEIVSGAQRIHDPELLAERAKACGISIESLH----AYLQSFSHGAYPHAGCGI 582

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
           G++R+VML LG  N+R  S+FP     C+ L
Sbjct: 583 GLERVVMLFLGLPNIRYTSMFPRDPKRCNPL 613


>gi|219276601|ref|NP_001136422.1| asparaginyl-tRNA synthetase, cytoplasmic isoform 1 [Mus musculus]
 gi|193806326|sp|Q8BP47|SYNC_MOUSE RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148677754|gb|EDL09701.1| asparaginyl-tRNA synthetase, isoform CRA_a [Mus musculus]
          Length = 559

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 117/289 (40%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 136 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 182

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 183 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 242

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ I    R       + E +TP L  +  EG           
Sbjct: 243 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 302

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   EF  ++ E  F+  +
Sbjct: 303 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 359

Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283
           D+LN +E+        VL+      V+E   N       F R+ Y DAI
Sbjct: 360 DLLNRLEDLVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAI 408



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 476 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 531

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  +L   ++R+V L+P     C
Sbjct: 532 ERFLSWILNRYHIRDVCLYPRFLQRC 557


>gi|24214566|ref|NP_712047.1| asparaginyl-tRNA synthetase [Leptospira interrogans serovar Lai
           str. 56601]
 gi|38258378|sp|Q8F522|SYN_LEPIN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|24195533|gb|AAN49065.1|AE011361_1 asparaginyl-tRNA synthetase [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 435

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 24/266 (9%)

Query: 16  DVGSFVR----LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSE 68
           D+G +V     + GWVH +R      FL +R+   I QV+A  +      F+  K +R E
Sbjct: 11  DLGKYVDQKVVIQGWVHGIRGSNARQFLSLRNSGKILQVLAEKEILGEEVFQTVKHLRQE 70

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G ++      I         EL  + I+I+  +E  P+     +E+        
Sbjct: 71  TSVTVIGNLVKNEKSPIG-------FELVMESIQIVGESENYPIT---PKEHGIDFLISQ 120

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R L LR       +  R  +  ++R      +F+   TPILT S  E A         + 
Sbjct: 121 RHLWLRSSKQLAILRVRDSLSFAIRKYFHERDFLLIDTPILTGSVGESAGTLFSTEYFDL 180

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G+ Y L Q  Q Y +  + +  ++ F   P FR E  ++ R   EF+ ++ E++F    +
Sbjct: 181 GNAY-LAQTGQLYLETAIFA-HNKVFCYGPTFRAEKSKTRRHLTEFWMVEAEVAFATHAE 238

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNF 274
            L   E+ ++ V +E     TV N+F
Sbjct: 239 NLKLQEDFVKTVIKE-----TVQNSF 259


>gi|145641184|ref|ZP_01796764.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145274021|gb|EDK13887.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 502

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 29/286 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V+++G +   R  G   F+ I+D  G  Q+    D+    +       W    ++ + G 
Sbjct: 64  VQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGDIIGVKGT 123

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           +             T ++ +   ++++L+ A   PLP        + +R++ R+LDL   
Sbjct: 124 LFKTK---------TNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISN 173

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+          Y 
Sbjct: 174 EESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVDMY- 231

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ +  D+++  
Sbjct: 232 LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADYHDLMDNT 290

Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
           E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 291 EELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336



 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536
           +++L   G EI +G    + +E   + F     +KE  ++    +      A + G+PP 
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDDDFVVALEHGLPPT 470

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+ ML   A ++R+V LFP
Sbjct: 471 AGEGLGIDRLAMLYANASSIRDVILFP 497


>gi|134302700|ref|YP_001122668.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134050477|gb|ABO47548.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 560

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV       PD   
Sbjct: 106 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 164

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +E  K+      LC  G ++  +      N  TG++ + A   EIL+ A   PLP     
Sbjct: 165 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 215

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + +R++ R++DL  +   + + K R++++N +R      +F+E  TP++        
Sbjct: 216 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVNFIRNYFDRLDFMEVETPMMHVLQGGAA 275

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F           Y L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  
Sbjct: 276 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTM 333

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287
           L+  M++ + +D+++  E++L  + +E      +            + RI   D+I +Y 
Sbjct: 334 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 393

Query: 288 TD--KPDL 293
            D  K DL
Sbjct: 394 DDITKEDL 401



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VM L  ++++R+V LFP
Sbjct: 519 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 555


>gi|74196771|dbj|BAE43117.1| unnamed protein product [Mus musculus]
          Length = 559

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 117/289 (40%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 136 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 182

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 183 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 242

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ I    R       + E +TP L  +  EG           
Sbjct: 243 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 302

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   EF  ++ E  F+  +
Sbjct: 303 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 359

Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283
           D+LN +E+        VL+      V+E   N       F R+ Y DAI
Sbjct: 360 DLLNRLEDLVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAI 408



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 476 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 531

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  +L   ++R+V L+P     C
Sbjct: 532 ERFLSWILNRYHIRDVCLYPRFLQRC 557


>gi|227432626|ref|ZP_03914602.1| lysyl-tRNA synthetase (class II) [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351596|gb|EEJ41846.1| lysyl-tRNA synthetase (class II) [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 495

 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 127/292 (43%), Gaps = 39/292 (13%)

Query: 5   RTHSCGDL-GVSDVGSFVRLSGWVHRV---------RPHGGIIFLDIRDHYGITQVVANP 54
           RT    +L  + D  S   L    H V         R  G +IF D RD  G  QV A  
Sbjct: 36  RTAKAQELHNLYDASSLEELENAKHEVVIAGRMVAKRGAGKVIFADFRDVSGKIQVYARR 95

Query: 55  DSAC--FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           D     + I K       L I G++M   A         G++ + A+++  LS A   P+
Sbjct: 96  DDLANNYPIIKRADLGDFLGIKGIMMKTEA---------GELTVLAKELTHLSKALR-PM 145

Query: 113 PVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL- 169
           P           R++ R+LDL    D+  K   +R+ II+++R  M   +F+E  TPIL 
Sbjct: 146 PDKFHGISDVETRYRKRYLDLIANEDSF-KKFQERSHIISAIRAYMDRNDFLEVETPILQ 204

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRS 227
           T +    AR F+          Y +  A + Y + L+  G +R ++I   FR+E  DP+ 
Sbjct: 205 TEAGGAAARPFITHHNALNIDMY-MRIATELYLKRLVVGGMERVYEIGRIFRNEGMDPKH 263

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           +    EF  ++   ++++  D+++  E +       F    +V ++ L+I Y
Sbjct: 264 N---PEFTTMESYAAYMDFTDVMDETEGI-------FKAAASVVSDDLKITY 305



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  +  +R+V LFP
Sbjct: 455 ALEYGMPPTGGLGVGIDRLVMLLTDSDTIRDVVLFP 490


>gi|195027183|ref|XP_001986463.1| GH21379 [Drosophila grimshawi]
 gi|193902463|gb|EDW01330.1| GH21379 [Drosophila grimshawi]
          Length = 533

 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 38/275 (13%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           V+D G  + + G VH  R  G   FL +R      Q        C      V S+ ++  
Sbjct: 85  VNDKG-LLWVRGRVHTSRAKGKQCFLILRQQSSTVQ--------CILAVGDVISKQMVKF 135

Query: 74  DGLVMSRSAETINANII---------TGQI-ELSAQKIEILSVAE-ELPLPVFGEREYPE 122
            G +   S   I A  +         T Q+ EL  ++I ++S A+ +LPL +  +   PE
Sbjct: 136 AGNIPKESIIDIQAKAVAVPNRIESCTEQLLELFIEQIFVISQAKAQLPLQI-EDASRPE 194

Query: 123 S--------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
           +               R   R LDLR             +    R  +  + F E  TP 
Sbjct: 195 NADDADGLNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTDQGFTEIHTPK 254

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           + +++ EG  +    S     ++  L Q+PQ YKQ+ +A+ FD+ + +   FR ED  + 
Sbjct: 255 IISAASEGGANVFTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTH 312

Query: 229 RLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262
           R   EF  LD+EM+F     ++L+T+ N    +F+
Sbjct: 313 RHLTEFVGLDLEMAFKYHYHEVLHTIGNTFTAIFK 347



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++   +  I       +      +F+ G PPH G   
Sbjct: 448 YDMFMRGEEILSGAQRIHDPEYLIERAKHHNIDT----TKIAAYIESFRYGCPPHAGGGI 503

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 504 GMERVVMLYLGLDNIRKTSMFP 525


>gi|195050025|ref|XP_001992811.1| GH13480 [Drosophila grimshawi]
 gi|193899870|gb|EDV98736.1| GH13480 [Drosophila grimshawi]
          Length = 558

 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 12/248 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEW 69
           G  + G+ V++ GWVHR+R  G  ++F+ +RD  G  Q V N D  C  +E         
Sbjct: 130 GAQERGTRVKIYGWVHRLRRQGKSLMFITLRDGTGFVQCVLN-DLLCQTYEAVVLNTESS 188

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           VL    L +    +T       G  EL+    E++ +A           E    ++   R
Sbjct: 189 VLLYGTLSLVPEGKT-----APGGHELNVDYWELIGLAPPGGADAILNEEANPDVQLDNR 243

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            + +R +   K +  R+ ++ + R       + E + P L  +  EG          N+ 
Sbjct: 244 HIMIRGENTSKVLKMRSVVMQAFRSHYFERGYTEVTPPTLVQTQVEGGSTLFKMQYFNEE 303

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  +D+
Sbjct: 304 AY--LTQSSQLYLETCLPALGD-VFTIAQSYRAEQSRTRRHLAEYTHIEGECPFITFEDL 360

Query: 250 LNTMENVL 257
           LN +E+++
Sbjct: 361 LNRLEDLV 368



 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R + SE +++ +   GI  +     +    R +  G  PHGG   G+
Sbjct: 475 LLPNVGEIIGGSMRIYDSEELMKGYEREGI--DPTPYYWYTDQRVY--GTTPHGGYGLGL 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  LL   ++REV L+P   + C
Sbjct: 531 ERFLCWLLNRYHIREVCLYPRFLDRC 556


>gi|302899207|ref|XP_003048003.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256728935|gb|EEU42290.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 526

 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 126/292 (43%), Gaps = 27/292 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V +SGWV  VR   G+ F+DI D   +  V    D +   +A  +R    + + G  +  
Sbjct: 52  VEVSGWVRSVRKSSGVRFIDITDGSSMRPVQVVVDKS---LATDMRPGAAVRLKGTWVDE 108

Query: 81  S-------AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           +       AE+  A       EL   ++E+L  ++    P+  + + PES+R        
Sbjct: 109 TKEESENNAESSEAPKTPANAELQVSEVEVLGHSDPQTYPIQNKYQTPESLRTISHLRS- 167

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R  L+  +++ R+     +      E F +   PI+T+S  EGA +       + G F+
Sbjct: 168 -RTPLNSTMLRLRSDATALLTQFFFQERFQQSHPPIITSSDCEGAGEAFAVKASSPGEFF 226

Query: 193 ALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
             P+      QL    +A      + ++P FR E   + R   EFY L+ EMSFV+  D+
Sbjct: 227 RDPKYLTVSSQLHLEALAQALGNVWTLSPTFRAEQSDTSRHLSEFYMLEAEMSFVDDMDE 286

Query: 249 ILNTMENVLRGV---FEEFSNGNTVSNNFL-------RICYDDAIRRYGTDK 290
           +++  + +L  +    +E +    +  N +       R+ ++D + +   D+
Sbjct: 287 VMDLAQRMLNSLARGLKELNAAKELEQNRVDSKDPAERLAFNDLVDQEQLDR 338



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 5/94 (5%)

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGI---SKEVVENRFGGLYRAFQ-CGMPPH 536
           +DL+     E+A G +R H    + +    +G+   SK   + +    Y   +  G PPH
Sbjct: 432 FDLLVPSLGELAGGSMREHRLPQLEENMRALGLEVPSKRSPKGKELAWYLDLRRWGCPPH 491

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           GG   G DR++  L G  NVR+V  FP     CD
Sbjct: 492 GGFGLGFDRLLSYLTGVPNVRDVVAFPRHYERCD 525


>gi|189203561|ref|XP_001938116.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187985215|gb|EDU50703.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 1041

 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 124/293 (42%), Gaps = 38/293 (12%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ--VVANPDSACFEI-- 61
           H   D    D+G  V     +H +R      +FL  R      Q  +V + D + + +  
Sbjct: 211 HKIQDFSAKDIGKEVVFRARIHHLRKMSSKFVFLMFRQQLATIQGVLVEHADISKYMLYW 270

Query: 62  AKSVRSEWVLCIDGLVM---SRSAETINANIITGQIELSAQKIEILSVAEELPLPV---- 114
           A+ + +E V+ + G++    ++  E + A I   ++ + A  +E  SV + LP  V    
Sbjct: 271 AEHLDAETVVLVKGILQEPKAKQGEVLGATIHDVEVSVHALHVEA-SVTDHLPFNVNEAE 329

Query: 115 ---------FGEREYPES---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM 156
                      + ++ E           R   R +DLR          ++ I    R ++
Sbjct: 330 VTQAEVDAELAKEDHKEGHTRVKIADRTRLNNRVIDLRTTASQGIFRIQSGICRLFRNQL 389

Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216
            +E FIE  TP L   + E            +G+F A  Q+PQ  KQ+ +++ F + ++I
Sbjct: 390 DSEGFIEIHTPKLQGGATESGASVFKIDYFGRGAFLA--QSPQLAKQMAISADFGKVYEI 447

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDIL----NTMENVLRGVFEEF 264
              FR E+  + R   E+  LD+EM   E   ++L     T + + +G++E++
Sbjct: 448 GAVFRAENSNTYRHLTEYTGLDLEMQIDEHYHEVLRVLDRTFKAIFKGIYEQY 500



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+ C G EI SGG R H ++++L+    + +    +E    G    FQ G PPHGG   
Sbjct: 601 FDIFCRGQEILSGGQRIHDADMLLEKMRKLKVDPSSMEEYIQG----FQWGAPPHGGGGI 656

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
           G++RI+ML++   N+R  S+FP            P    ++QLR
Sbjct: 657 GLERILMLMMSLGNIRHASMFPRDPKSL------PEKAVIKQLR 694


>gi|322830587|gb|EFZ33557.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 495

 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 14/239 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
            R+ G V   R  G I F+ +R    + I QVVA+       + K +  E ++   G ++
Sbjct: 8   TRIRGRVETTRIRGKIAFIHLRQPPCHSI-QVVASAADIVRRV-KELTPESIIDATGTLV 65

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                  +A+      EL A++++++S  A  LP P+       ++ R  +R +D+R   
Sbjct: 66  PAERPVTSASC--KNYELHAERVDVVSRAATPLPFPIKDCNTRLDT-RLNHRVMDMRTPL 122

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +   + +    R +++A +F+E  TP +  ++ EG           Q  + A  Q+
Sbjct: 123 TASVLRLVSAVCQCFRKQLLARDFVEIHTPKMLGAASEGGSAVFTIDYFGQRGYLA--QS 180

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD----MEMSFVEQDDILNT 252
           PQ YKQ+++     R F+I P FR E   + R   EF  LD    +E S+ E  D+L +
Sbjct: 181 PQLYKQMVLMGDAMRVFEIGPVFRAEKSLTHRHLTEFVGLDAEFVIEHSYTEVLDVLES 239



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H   ++LQ    + +    +++       AF+ G  PHGG   
Sbjct: 410 FDMYLRGEEICSGAQRIHDITLLLQNMERLQVDVASLKDYVD----AFRYGAWPHGGFGL 465

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV+ LLGAK++R++SLFP
Sbjct: 466 GLERIVLFLLGAKDIRQISLFP 487


>gi|315634627|ref|ZP_07889911.1| lysine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476575|gb|EFU67323.1| lysine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 502

 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 122/282 (43%), Gaps = 21/282 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ I+D  G  Q+    D+    +       W L   G ++  
Sbjct: 64  VAVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYGDDVGHWDL---GDIVGV 120

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     T ++ + A  +++L+ A   PLP        + +R++ R+LDL   +   
Sbjct: 121 KGSLFKTK--TNELTVKATDVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISNEESR 177

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  + R++++  +R   I++ F+E  TP+L    P GA  R F+          Y L  A
Sbjct: 178 RTFIIRSKVVAGIRDYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVDMY-LRIA 235

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ +  D+++  E +L
Sbjct: 236 PELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADYHDLMDNTEELL 294

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
           R +  +      V            F RI   DA  +YG DK
Sbjct: 295 RKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336



 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|302380263|ref|ZP_07268735.1| lysine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302312046|gb|EFK94055.1| lysine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 630

 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 136/283 (48%), Gaps = 24/283 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+++G +   R HG + F+D++D  G  Q+    +    E    V++  +  I G+ 
Sbjct: 49  GKEVKIAGRIMSKRGHGKVNFMDLQDSLGRIQLFNKVNELGEENYAKVKNMDIGDIVGV- 107

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136
                E       +G+I +  + + +LS + + LP    G ++ P+ +R++ R++DL  +
Sbjct: 108 -----EGSIFKTHSGEISIRTKSVVLLSKSLQILPEKWHGLKD-PD-LRYRQRYVDLIMN 160

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
             +    VKR+RII+++R  +    F+E  TPIL T +    AR F+          Y L
Sbjct: 161 PEIKDTFVKRSRIISAIREFLDTRGFLEVDTPILNTIAGGANARPFITHHNTLDIDMY-L 219

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + Y + L+  GFD+ +++   FR+E       P E+  +++  ++ + +D+++  E
Sbjct: 220 RIANELYLKRLIVGGFDKVYEMGRMFRNEGMDHTHNP-EYTAIELYQAYADYNDMMDITE 278

Query: 255 NVLRGVFEEFSNGNTVSN----------NFLRICYDDAIRRYG 287
            ++  V E+  NG+  S            + RI   DAI+ Y 
Sbjct: 279 QLVAFVCEKV-NGSMKSQFGETEIDFTPPWKRITMVDAIKEYA 320



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR++M+L   +++R++ LFP
Sbjct: 446 ALEVGLPPTGGLGIGVDRLIMMLTNNESIRDIMLFP 481


>gi|304414310|ref|ZP_07395678.1| Lysyl-tRNA synthetase (class II) [Candidatus Regiella insecticola
           LSR1]
 gi|304283524|gb|EFL91920.1| Lysyl-tRNA synthetase (class II) [Candidatus Regiella insecticola
           LSR1]
          Length = 504

 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 134/306 (43%), Gaps = 25/306 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      DL   D+   V+++G +   R  G   F+ ++D  G  Q+    D    E 
Sbjct: 51  EQYDNKDNDDLSKLDIK--VKVAGRMMTRRIMGKASFVTLQDAGGCIQLYVERDHLPKEF 108

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 +W L   G ++            TG++ +   ++ +L+ A   PLP        
Sbjct: 109 YNEKFKKWDL---GDILGAQGTLFKTK--TGELSIRCTELRLLTKALR-PLPDKFHGLAD 162

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--R 178
           + + ++ R+LDL  +   +   K R+++I  MR  M+ + F+E  TP++    P GA  R
Sbjct: 163 KEMCYRQRYLDLIVNEEARRTFKIRSQLIAGMRQFMVDKGFMEVETPMMQVI-PGGAVAR 221

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S   P EF  ++
Sbjct: 222 PFITHHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLSSRHNP-EFTMME 279

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGT- 288
           + M++ +  D++   E + R + +     N ++           F R+   +AI +Y + 
Sbjct: 280 LYMAYADYRDLMKLTEELFRTLTQTVLGSNIITYGDNTFDFAKPFARLTMKEAICQYCSQ 339

Query: 289 -DKPDL 293
            D PDL
Sbjct: 340 IDAPDL 345



 Score = 44.7 bits (104), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G+  GIDR+VML   + ++R+V LFP
Sbjct: 464 ALEHGMPPTAGLGIGIDRMVMLFTNSHSIRDVILFP 499


>gi|319776547|ref|YP_004139035.1| lysyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|329124058|ref|ZP_08252605.1| lysine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317451138|emb|CBY87371.1| lysyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327467483|gb|EGF12981.1| lysine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 502

 Score = 70.5 bits (171), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 29/286 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V+++G +   R  G   F+ I+D  G  Q+    D+    +       W    ++ + G 
Sbjct: 64  VQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGDIIGVKGT 123

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           +             T ++ +   ++++L+ A   PLP        + +R++ R+LDL   
Sbjct: 124 LFKTK---------TNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISN 173

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+          Y 
Sbjct: 174 EESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVDMY- 231

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ +  D+++  
Sbjct: 232 LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADYHDLMDNT 290

Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
           E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 291 EELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADK 336



 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536
           +++L   G EI +G    + +E   + F     +KE  ++    +      A + G+PP 
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDDDFVVALEHGLPPT 470

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+ ML   A ++R+V LFP
Sbjct: 471 AGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|325261222|ref|ZP_08127960.1| lysine--tRNA ligase [Clostridium sp. D5]
 gi|324032676|gb|EGB93953.1| lysine--tRNA ligase [Clostridium sp. D5]
          Length = 649

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 134/286 (46%), Gaps = 30/286 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F +++D  G  Q     DS   ++ K  +   V  + G+V
Sbjct: 65  GKTVSIAGRMMSKRVMGKASFCNVQDLKGNIQSYVARDSIGEDVYKEFKKMDVGDVVGIV 124

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
                E       TG++ + A  +++LS + ++ LP          IR++ R++DL  + 
Sbjct: 125 ----GEVFRTK--TGEMSIHASSVKLLSKSLQI-LPEKFHGLTNTDIRYRQRYVDLIMNP 177

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +    +KR++I++++R  + A+ F+E  TP+L +++   A      +R  +  F AL +
Sbjct: 178 EVKDTFIKRSKILSAIRRYLDADGFMEVETPMLVSNAGGAA------ARPFETHFNALDE 231

Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                 + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   ++
Sbjct: 232 DFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYHGMM 290

Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           +  EN+ R V +E     T+  N         F RI   DA+++Y 
Sbjct: 291 DLTENLYRHVAQEVLGTTTIVYNGVEMDLGKPFERITMVDAVKKYA 336



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 4/56 (7%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
           A + GMPP GGI  GIDR+ MLL  +  +R+V LFP  +     L GS +   VE+
Sbjct: 462 ALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFPTMKT----LGGSDTAKKVEK 513


>gi|330924413|ref|XP_003300630.1| hypothetical protein PTT_11927 [Pyrenophora teres f. teres 0-1]
 gi|311325146|gb|EFQ91278.1| hypothetical protein PTT_11927 [Pyrenophora teres f. teres 0-1]
          Length = 1041

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 124/293 (42%), Gaps = 38/293 (12%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ--VVANPDSACFEI-- 61
           H   D    D+G  V     +H +R      +FL  R      Q  +V + D + + +  
Sbjct: 211 HKIQDFSAKDIGKEVVFRARIHHLRKMSSKFVFLMFRQQLATIQGVLVEHADISKYMLYW 270

Query: 62  AKSVRSEWVLCIDGLVM---SRSAETINANIITGQIELSAQKIEILSVAEELPLPV---- 114
           A+ + +E ++ + G++    ++  E + A I   ++ + A  +E  SV + LP  V    
Sbjct: 271 AEHLDAETIVLVKGILQEPKAKQGEVLGATIHDVEVSVHALHVEA-SVTDHLPFNVNEAE 329

Query: 115 ---------FGEREYPES---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM 156
                      + ++ E           R   R +DLR          ++ I    R ++
Sbjct: 330 VTQAEVDAELAKGDHKEGHSRVKIADRTRLNNRVIDLRTTASQGIFRIQSGICRLFRNQL 389

Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216
            +E FIE  TP L   + E            +G+F A  Q+PQ  KQ+ +++ F R ++I
Sbjct: 390 DSEGFIEIHTPKLQGGATESGASVFKIDYFGRGAFLA--QSPQLAKQMAISADFGRVYEI 447

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDIL----NTMENVLRGVFEEF 264
              FR E+  + R   E+  LD+EM   E   ++L     T + + +G++E++
Sbjct: 448 GAVFRAENSNTYRHLTEYTGLDLEMQIDEHYHEVLRVLDRTFKAIFKGIYEQY 500



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+ C G EI SGG R H ++++L+    + +    +E+      +AFQ G PPHGG   
Sbjct: 601 FDIFCRGQEILSGGQRIHDADMLLEKMRKLKVDPSSMEDYI----QAFQWGAPPHGGGGI 656

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RI+ML++   N+R  S+FP
Sbjct: 657 GLERILMLMMNLGNIRHASMFP 678


>gi|310766542|gb|ADP11492.1| lysyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 506

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 27/293 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L   G 
Sbjct: 64  LGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLADGIYNEQFKKWDL---GD 120

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL   
Sbjct: 121 ILGARGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           D   K    R++I+  +R  M+  +F+E  TP++ A  P GA  R F+          Y 
Sbjct: 178 DDSRKTFKIRSQIMAGIRNFMVGRDFMEVETPMMQAI-PGGASARPFITHHNALDLDMY- 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           L  AP+ Y + L+  GFDR F+I   FR+E   PR +    EF  +++ M++ +  D++ 
Sbjct: 236 LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHN---PEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDL 293
             E++ R + ++      V            F ++   +AI +Y   TD  DL
Sbjct: 293 LTESLFRTLAQDVLGSTVVPYGDQQFDFGKPFAQLTMKEAILKYRPQTDLADL 345



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGVGIDRMVMLFTNSHTIRDVILFP 499


>gi|225569856|ref|ZP_03778881.1| hypothetical protein CLOHYLEM_05950 [Clostridium hylemonae DSM
           15053]
 gi|225161326|gb|EEG73945.1| hypothetical protein CLOHYLEM_05950 [Clostridium hylemonae DSM
           15053]
          Length = 646

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 38/290 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G V + R  G   F ++ D  G  Q     DS   E  K  +   +  I GL 
Sbjct: 58  GKHVSVAGRVMQKRVMGKASFCNVLDQSGNIQSYVARDSLGEEAYKEFKKLDIGDIVGL- 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---- 133
                E       TG+I + A  +++LS + ++ LP           R++ R++DL    
Sbjct: 117 ---EGEVFKTK--TGEISIHATAVKLLSKSLQI-LPEKFHGLTNTDTRYRQRYVDLIMNP 170

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             RDT     +KR+ II+++R  +  + F+E  TP+L +++   A      +R  +  F 
Sbjct: 171 EVRDTF----IKRSHIISAIRRYLDGQGFLEVETPMLVSNAGGAA------ARPFETHFN 220

Query: 193 ALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           AL +      + + Y + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + 
Sbjct: 221 ALSEDFKLRISLELYLKRLIVGGLEKVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDY 279

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           + +++  EN+ R V +E     T+  N         F RI   DA+++Y 
Sbjct: 280 NGMMDLTENLYRHVAQEVLGTTTIVYNGVEMDLGKPFERITMIDAVKKYA 329



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+ ML+  +  +R+V LFP
Sbjct: 455 ALEIGMPPTGGIGFGIDRMCMLMTDSAAIRDVLLFP 490


>gi|170079063|ref|YP_001735701.1| asparaginyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|226695303|sp|B1XKH1|SYN_SYNP2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|169886732|gb|ACB00446.1| asparaginyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 460

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 124/316 (39%), Gaps = 55/316 (17%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSE 68
           L  + + S +   GWV   R   G  F++I D   +   QV+ + + A +E I K + + 
Sbjct: 7   LNTAAINSTITAEGWVKTKRELKGFSFIEISDGSTMNGLQVIIDGNLADYEAIIKKLNTG 66

Query: 69  WVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             +   GLV+    +        GQ IEL A+ + +   A+    P+  +R    S  F 
Sbjct: 67  AAVTATGLVVESPGK--------GQRIELQAKAVTVHGEADPETYPLQKKRH---SFEFL 115

Query: 128 YRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGAR------- 178
                LR  T     V R R     ++        FI   TPI+TAS  EGA        
Sbjct: 116 RTIGHLRGKTNTMGAVMRVRNACATAIHQFFQERGFIWAHTPIITASDCEGAGEMFAVTN 175

Query: 179 -DFLVPSRVNQGS------FYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            D   P R  +G+      F+  P       Q +  +MA  F   +   P FR E+  + 
Sbjct: 176 FDLANPKRTKEGAVDYAEDFFGRPAYLTVSGQLEAEVMAMAFKDVYTFGPTFRAENSNTS 235

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG----------- 267
           R   EF+ ++ EM+F +     +  E  LR +F+          EF N            
Sbjct: 236 RHLAEFWMVEPEMAFCDIVGDQDLAEEFLRYIFKYVLEACPEDMEFFNKRIDNSVLATAQ 295

Query: 268 NTVSNNFLRICYDDAI 283
           N + N F RI Y +AI
Sbjct: 296 NIIENEFARITYTEAI 311


>gi|259909550|ref|YP_002649906.1| lysyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224965172|emb|CAX56704.1| Lysyl tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283479627|emb|CAY75543.1| lysyl-tRNA synthetase [Erwinia pyrifoliae DSM 12163]
          Length = 506

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 27/293 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L   G 
Sbjct: 64  LGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLADGIYNEQFKKWDL---GD 120

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL   
Sbjct: 121 ILGARGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           D   K    R++I+  +R  M+  +F+E  TP++ A  P GA  R F+          Y 
Sbjct: 178 DDSRKTFKIRSQIMAGIRNFMVGRDFMEVETPMMQAI-PGGASARPFITHHNALDLDMY- 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           L  AP+ Y + L+  GFDR F+I   FR+E   PR +    EF  +++ M++ +  D++ 
Sbjct: 236 LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHN---PEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDL 293
             E++ R + ++      V            F ++   +AI +Y   TD  DL
Sbjct: 293 LTESLFRTLAQDVLGSTVVPYGDQQFDFGKPFAQLTMKEAILKYRPQTDLADL 345



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGVGIDRMVMLFTNSHTIRDVILFP 499


>gi|188997502|ref|YP_001931753.1| lysyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932569|gb|ACD67199.1| lysyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 577

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 118/247 (47%), Gaps = 18/247 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +  +R  G   F  I+D  G  QV  N D    E  K      ++ I  ++   
Sbjct: 140 VAVAGRLIALRDQGKAAFGHIQDSDGKLQVYFNADILGEENYKKAMD--LIDIGDII--- 194

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV----FGEREYPESIRFKYRFLDLRRD 136
             E      +TG++ +     EIL+ +   PLP       + EY    R++YR+LDL  +
Sbjct: 195 GVEGHLFRTMTGELTVEVHNYEILAKSLR-PLPEKWHGLKDTEY----RYRYRYLDLIAN 249

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYAL 194
              + I K R++ I S+R  + ++ FIE  TPIL   +S   A+ F+        + Y L
Sbjct: 250 QRTREIFKIRSKAIKSLREFLESKGFIEVETPILQPVASGAMAKPFITYHNALDMNLY-L 308

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  GF+R F+I   FR+E   +   P EF  ++   ++++ +D++   E
Sbjct: 309 RIAPELYLKMLVVGGFNRVFEIGRNFRNEGIDTTHNP-EFTMVEFYAAYLDYNDLMALTE 367

Query: 255 NVLRGVF 261
            + R + 
Sbjct: 368 ELFRKIL 374



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 18/164 (10%)

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK-----KIDFAHNPFTMPQ 463
           F  F   ARN  A+E+GI   +      I+D  F  + EE+       IDF   P  +  
Sbjct: 416 FLDFEK-ARN-FAKEVGIPKADTLTHVKILDKLFEHFVEEDLIQPTFVIDF---PKILSP 470

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASG--GIRNHMS--EVMLQAFSNVGISKEVVE 519
                    DL+     +++L+ N  E+A+    + + M   E  +Q      +  E   
Sbjct: 471 LAKTHRNDPDLVE----RFELIINKKELANAYTELNDPMDQRERFIQQIREKEMGDEEAM 526

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +       A + G+PP  G   GIDR+VM+L    ++REV LFP
Sbjct: 527 DIDETFLTALEYGLPPTAGEGIGIDRLVMMLTDNYSIREVILFP 570


>gi|290559873|gb|EFD93196.1| aspartyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 112

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 56/101 (55%)

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
            NG EI  G +R +  E+ L+    +GI +E     FG L  A   G P   G A G+DR
Sbjct: 1   MNGNEIGGGAVRINNREMQLKILDMIGIHEEDAMKNFGFLIEALSYGAPKDIGFAIGLDR 60

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            VMLL GA+++R+  LFP +++F   + GSP+ +   +L +
Sbjct: 61  FVMLLKGAQSIRDFILFPKTKSFESPIDGSPTIIENSRLSD 101


>gi|50302869|ref|XP_451372.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640503|emb|CAH02960.1| KLLA0A08426p [Kluyveromyces lactis]
          Length = 554

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 43/293 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V   V++SGWVHR+R +  ++F+ +RD  G  Q V   D A      ++  E  + + G 
Sbjct: 128 VDKRVKVSGWVHRLRNNKSVVFIILRDGTGFLQTVLTGDLARSYQIVNLTLETTITLYGT 187

Query: 77  VM----SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--------SI 124
           +     S+SA         G +EL     EI+      P P  GE  +          SI
Sbjct: 188 IKVVPESKSA--------PGGVELFVDYFEIVG-----PAPS-GENAFTNRVQENADPSI 233

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
               R L LR +TL   +  R  ++ S+R     E   E + P +  +  EG        
Sbjct: 234 LLDQRHLMLRGETLSAVMKVRAALMKSIRRVYDEEGLTEVNPPCMVQTQVEGGSTLFKLD 293

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              + +F  L Q+ Q Y +  +A+  D Y  I   FR E   + R   E+  ++ E+ F+
Sbjct: 294 YYGEEAF--LTQSSQLYLETCLAALGDVYC-IQESFRAEKSHTRRHLSEYTHIEAELCFL 350

Query: 245 EQDDILNTMENV----LRGVFEEFSNGNTVSN----------NFLRICYDDAI 283
           + DD+L+ +E V    ++ V E+   G  V             F R+ Y DAI
Sbjct: 351 DFDDLLSHIERVITKTIQYVLEDPVAGPLVKKLNPNFQAPQLPFKRMEYKDAI 403


>gi|322800910|gb|EFZ21742.1| hypothetical protein SINV_00256 [Solenopsis invicta]
          Length = 686

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 23/274 (8%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK--- 63
           +  DL  +     V L G +H  R  G   F+ +R   Y +  + A  ++   ++ K   
Sbjct: 65  AIKDLNKNLENQTVWLRGRLHTSRAKGKQCFIVLRQQSYTVQGLAAVTEAVSKQMIKFIS 124

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVF-GEREYP 121
           ++  E ++ +  +VM   ++  + +     IEL  ++I ++S A+ +LPL +    R   
Sbjct: 125 NITKESIIDVMAVVMPVPSKIESCS--QKDIELHLKEIFVVSSAKPQLPLQIEDAARSVC 182

Query: 122 ES------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           E+             R   R LDLR             +    R  +  + F+E  TP +
Sbjct: 183 EADETALTVRVNQDTRLDNRVLDLRTPANQAIFRVEAGVCKLFRDILTRKGFVEIHTPKI 242

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
            +++ EG  +    S     ++  L Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R
Sbjct: 243 ISAASEGGANVFTVSYFKGNAY--LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHR 300

Query: 230 LPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262
              EF  LD+EM+F     ++++T+  +   +F+
Sbjct: 301 HLTEFVGLDLEMAFKYHYHEVIDTIGQMFTELFK 334



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  + + +   + GI  E +++       AF+ G PPH G   
Sbjct: 435 YDMFMRGEEIISGAQRIHDPDFLTERAKHHGIDIEKIKSYID----AFRYGCPPHAGGGI 490

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R+VML LG  N+R+VS+F
Sbjct: 491 GMERVVMLYLGLDNIRKVSIF 511


>gi|198418317|ref|XP_002125902.1| PREDICTED: similar to aspartyl-tRNA synthetase [Ciona intestinalis]
          Length = 533

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 105/255 (41%), Gaps = 26/255 (10%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSV 65
           GD+G +     + + G +H  R  G   F  +R      Q +            +   ++
Sbjct: 78  GDIGPNLAEKNIWVRGRLHTSRGTGKQCFTVLRHQQSTIQALIFVGEKISKQMVKFCANI 137

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE-- 122
             E ++ + G+V  +  E    +     +E+   KI ++S  A +LPL +  +   PE  
Sbjct: 138 SKESIVDVYGVV--KKVEQKVESCTQDDVEIHIGKIFVVSKAAPQLPL-LIEDASRPELE 194

Query: 123 --------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                           R   R LDLR  T          +    R  + A+ F E  TP 
Sbjct: 195 DGKNEEGGRPRVNLDTRLDNRILDLRTTTKQAIFRLEAGVCKLFRDTLTAKGFCEIHTPK 254

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           + +++ EG  +    S     +F A  Q+PQ YKQ+ +A+ F++ F +   FR ED  + 
Sbjct: 255 IISAASEGGANVFTVSYFKTNAFLA--QSPQLYKQMAIAADFEKVFTVGAVFRAEDSNTH 312

Query: 229 RLPGEFYQLDMEMSF 243
           R   EF  LD+EM+F
Sbjct: 313 RHLTEFVGLDLEMAF 327



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E + +     GI  + +E        +F+ G PPH G   
Sbjct: 448 YDMFMRGEEILSGAQRIHDPEFLSERAKAHGIDLKTIE----AYIDSFKYGCPPHAGGGI 503

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R  SLFP
Sbjct: 504 GMERVVMLYLGLHNIRSSSLFP 525


>gi|169824684|ref|YP_001692295.1| lysyl-tRNA synthetase class II [Finegoldia magna ATCC 29328]
 gi|167831489|dbj|BAG08405.1| lysyl-tRNA synthetase class II [Finegoldia magna ATCC 29328]
          Length = 636

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 137/286 (47%), Gaps = 30/286 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEIAKSVRSEWVLCID 74
           G  V+++G +   R HG + F+D++D  G  Q+   V       +   K++    ++ ++
Sbjct: 49  GKEVKIAGRIMSKRGHGKVNFMDLQDSLGRIQLFNKVNELGEENYAKVKNMDIGDIVGVE 108

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           G +    +         G+I +  + + +LS + + LP    G ++ P+ +R++ R++DL
Sbjct: 109 GSIFKTHS---------GEISIRTKSVVLLSKSLQILPEKWHGLKD-PD-LRYRQRYVDL 157

Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +  +    VKR+RII+++R  +    F+E  TPIL T +    AR F+          
Sbjct: 158 IMNPEIKDTFVKRSRIISAIREFLDTRGFLEVDTPILNTIAGGANARPFITHHNTLDIDM 217

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + Y + L+  GFD+ +++   FR+E       P E+  +++  ++ + +D+++
Sbjct: 218 Y-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDHTHNP-EYTAIELYQAYADYNDMMD 275

Query: 252 TMENVLRGVFEEFSNGNTVSN----------NFLRICYDDAIRRYG 287
             E ++  V E+  NG+  S            + RI   DAI+ Y 
Sbjct: 276 ITEQLVAFVCEKV-NGSMKSQFGETEIDFTPPWKRITMVDAIKEYA 320



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR++M+L   +++R++ LFP
Sbjct: 446 ALEVGLPPTGGLGIGVDRLIMMLTNNESIRDIMLFP 481


>gi|312898248|ref|ZP_07757639.1| lysyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620745|gb|EFQ04314.1| lysyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 502

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 118/262 (45%), Gaps = 22/262 (8%)

Query: 6   THSCGDL-----GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SA 57
           TH   D+      +   G+ V L+G +  +R HG   F  +RD  G  Q+    D    A
Sbjct: 46  THHAQDIKDRAEALEKDGTTVSLAGRLMALRRHGKTAFCVLRDISGEVQLYFRKDVVGEA 105

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            +E+ K +    ++ ++G V +         ++T  +   + +          PLP    
Sbjct: 106 SYELFKLLDIGDIVGVEGDVFTTHTGETTVRVVTWTLLSKSLR----------PLPEKFH 155

Query: 118 REYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPE 175
               +  R++ R+LDL  +   KN  + R+RII  +R  + A NF+E  TP+L   +   
Sbjct: 156 GLTDKETRYRQRYLDLIVNPEVKNTFIMRSRIIKGIREYLDARNFLEVETPMLHNIAGGA 215

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+          + L  AP+ + + L+  G +R +++  CFR+E   +   P EF 
Sbjct: 216 AARPFVTHHNALDMDIF-LRIAPELHLKRLLVGGLERVYEMNRCFRNEGIDTRHNP-EFT 273

Query: 236 QLDMEMSFVEQDDILNTMENVL 257
            +++  +F + +D++   E ++
Sbjct: 274 TVELYQAFGDLEDVIRITEELV 295



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 30/40 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           RA + GMPP GG+  GIDR+VM L  + ++R+V LFP+S+
Sbjct: 459 RALEYGMPPAGGLGIGIDRLVMFLTNSPSIRDVLLFPLSR 498


>gi|304396711|ref|ZP_07378591.1| lysyl-tRNA synthetase [Pantoea sp. aB]
 gi|304355507|gb|EFM19874.1| lysyl-tRNA synthetase [Pantoea sp. aB]
          Length = 506

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 139/311 (44%), Gaps = 29/311 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +  Y   S  +L   D+   V ++G +   R  G   F+ ++D  G  Q+  + D     
Sbjct: 50  LESYGEKSNEELEALDIE--VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEG 107

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I      +W L   G ++    +       TG++ +   ++ +L+ A   PLP       
Sbjct: 108 IYNEQFKKWDL---GDILGARGKLFRTK--TGELSIHCSELRLLTKALR-PLPDKFHGLA 161

Query: 121 PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA-- 177
            +  R++ R+LDL  +   +N  K R++I+  +R  M+  +F+E  TP++    P GA  
Sbjct: 162 DQETRYRQRYLDLIANEESRNTFKIRSQIMAGIRQFMVGRDFMEVETPMMQVI-PGGASA 220

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFY 235
           R F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   PR +    EF 
Sbjct: 221 RPFITHHNALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHN---PEFT 276

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286
            +++ M++ +  D++   E++ R + ++      V            F ++   +AI++Y
Sbjct: 277 MMELYMAYADYKDLIELTESLFRTLAQDVLGSTVVPYGEQEFDFGKPFEKLTMREAIKKY 336

Query: 287 --GTDKPDLRN 295
              TD  DL +
Sbjct: 337 RPETDLADLED 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|304440039|ref|ZP_07399932.1| lysine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371531|gb|EFM25144.1| lysine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 633

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 123/249 (49%), Gaps = 26/249 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVM 78
           V ++G +   R HG I FLD++D  G  Q+    D  +  +++ K +    ++ + G V 
Sbjct: 55  VVVAGRIMSKRRHGKIAFLDLQDSRGTIQIFLRKDVMNEGYDVIKDIDIGDIVGVKGKVF 114

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDT 137
              A         G+I + A +  +LS + + LP    G ++    +R++ R++DL  + 
Sbjct: 115 KTEA---------GEITVRATEASLLSKSLQILPEKFHGLKDI--ELRYRMRYVDLIVNP 163

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
             K++ +KR++II +++  +    F+E  TPIL + +    A+ FL            + 
Sbjct: 164 EVKDVFIKRSKIIKAIKEYLDERGFLEVETPILGSVAGGANAKPFLTHHNTLDMDM-QMR 222

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
            A + Y + L+  GFD+ +++   FR+E   PR +    EF  +++  ++V+ ++++   
Sbjct: 223 IANELYLKRLIVGGFDKVYELGKMFRNEGISPRHN---PEFTNIELYQAYVDYEEMMRIT 279

Query: 254 ENVLRGVFE 262
           E    G+FE
Sbjct: 280 E----GIFE 284



 Score = 44.7 bits (104), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR++M+LL    +R++  FP
Sbjct: 448 AIEVGLPPTGGLGIGVDRMIMILLDQPTIRDIIFFP 483


>gi|239616616|ref|YP_002939938.1| asparaginyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239505447|gb|ACR78934.1| asparaginyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 432

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 115/287 (40%), Gaps = 31/287 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCI 73
           +G  V + GW+ R R  G I FL +RD  G  Q +    S     F++AK ++ E  +  
Sbjct: 13  IGERVEIRGWLRRKRSSGKIHFLALRDGSGFVQGIVERSSVSEELFKLAKKLKMESSIIA 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V           ++  +IE+  Q         E   P+  + ++       +R L L
Sbjct: 73  RGIVREDPRAPEGVELLIDEIEVVHQP--------EKDFPI-NKPDHGIDYLMDHRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  II ++R       F+   TPI T S  E A +       + G  Y 
Sbjct: 124 RSKRQFHILHIRHEIIRAVRDFYNERGFVLIDTPIFTGSIGESAGNCFEIDYFDYGKAY- 182

Query: 194 LPQAPQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           L Q  Q Y +   MA G  + + + P FR E  ++ R   EF+  + E+++ + +D +  
Sbjct: 183 LAQTGQLYLEAACMALG--KVYNLGPTFRAEKSKTRRHLIEFWMNEAEVAYYQHEDNMKL 240

Query: 253 ME---------------NVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            E               N L  +  + S    +   F RI Y DAI+
Sbjct: 241 QEELVSYVVQKTIERAANHLHAIGRDISKLEKIEAPFPRITYTDAIK 287


>gi|169335601|ref|ZP_02862794.1| hypothetical protein ANASTE_02016 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258339|gb|EDS72305.1| hypothetical protein ANASTE_02016 [Anaerofustis stercorihominis DSM
           17244]
          Length = 491

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 19/245 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74
           G  V+L+G +   R  G + F D+ D  G  Q+    D      + + K+     +L +D
Sbjct: 53  GKKVKLAGRLMSKRGQGKVGFYDLMDSSGRIQLFIKKDVVGEDEYALIKAYDIGDILGVD 112

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
           G V              GQI +  +K+ +LS + + LP    G ++ PE +R++ R++DL
Sbjct: 113 GEVFKTQ---------RGQISVRVEKVILLSKSIQVLPEKFHGLKD-PE-LRYRQRYVDL 161

Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +   K++ + R++I+  MR  M  E F+E  TP+L T +    AR F+          
Sbjct: 162 IMNPEVKDVFLMRSKIVKCMRDFMDGEGFVEVETPVLGTLAGGANARPFITHHNTLDIPM 221

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y         K+L++  GFD+ ++I   FR+E   +   P EF  ++   ++ + +D++N
Sbjct: 222 YMRIATELPLKRLVVG-GFDKVYEIGRIFRNEGMDATHNP-EFTTMESYQAYADFNDVMN 279

Query: 252 TMENV 256
             E +
Sbjct: 280 MSEKM 284



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR+VMLL    ++R+V LFP
Sbjct: 450 ALEVGLPPTGGVGFGVDRLVMLLTNQSSIRDVILFP 485


>gi|110751167|ref|XP_623874.2| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           [Apis mellifera]
          Length = 433

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 136/311 (43%), Gaps = 45/311 (14%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           + +  GW+H VR     IF+DI D        + P      I KS + +  L     +++
Sbjct: 3   YSQYVGWIHAVRKMKNNIFIDITDG-------STPKMLQIVIPKSNKPD-NLSFGSSIIA 54

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                ++ N   G+IEL    + I+   + +    F  R++ + + +  +FL LR  T  
Sbjct: 55  EGKLVLSPN---GRIELHTNNVTIIGTCDVMDGYPFAPRKHYD-MDYIRQFLHLRSRTRR 110

Query: 140 KNIVKRTRIIN--SMRCRMIAENFIECSTPILTASSPEGARD-FLVP----------SRV 186
            + + R R +   S+   + ++NFI   TPILT++  EGA + FLV            R 
Sbjct: 111 FSSLLRLRDMTTASIENYLRSKNFINVHTPILTSNDCEGAGELFLVKPHCENLLKSMKRE 170

Query: 187 N---QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           N   + S++   A      Q     +A    + +   P FR E+ +S     EFY L+ E
Sbjct: 171 NMSEEESYFNTKAFLTVSGQLHLETIARSLTKVYTFGPSFRAENSKSRLHLTEFYMLEAE 230

Query: 241 MSFVEQ-DDILNTMENVLRGVFEE-FSNGNT------------VSNNFLRICYDDAIRRY 286
           ++F+   DDI+  +E++++ V ++ F  G              ++  F+ I YD+AI   
Sbjct: 231 LAFINNIDDIMIEIESLIKYVIKDVFEKGAADIHVIGGCEVAWLNKKFICITYDEAINIL 290

Query: 287 GTDKPDLRNPI 297
             +   L  PI
Sbjct: 291 ENNANSLSTPI 301


>gi|332031478|gb|EGI70962.1| Aspartyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 542

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 121/266 (45%), Gaps = 25/266 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH----YGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V L G +H  R  G   F+ +R       G+  V         +   ++  E ++ +  +
Sbjct: 100 VWLRGRLHTSRAKGRQCFVVLRQQSYTVQGLAAVNEEISKQMIKFISNITKESIIDVMAI 159

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV------FGEREYP-------E 122
           VM   ++  + +     +E+  ++I ++S A+ +LPL +       GE +         +
Sbjct: 160 VMPVPSKIESCS--QKDVEVHLKEIFVVSAAKSQLPLQIEDAARPIGEVDETTLNVRVNQ 217

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFL 181
             R   R LDLR             +    R  +  + F+E  TP I++A+S  GA  F 
Sbjct: 218 DTRLDNRVLDLRTPANQAIFKVEAGVCKLFRDILTRKGFVEIHTPKIISAASEGGANVFT 277

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           V     +G+ Y L Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R   EF  LD+EM
Sbjct: 278 V--SYFKGNAY-LAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVGLDLEM 334

Query: 242 SF-VEQDDILNTMENVLRGVFEEFSN 266
           +F     ++++T+  +   +F+E  +
Sbjct: 335 AFKYHYHEVVDTIGQMFTELFKELRD 360



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  + + +   + GI  E + +       AF+ G PPH G   
Sbjct: 457 YDMFMRGEEIISGAQRIHDPDFLTERAKHHGIDIEKIRSYID----AFRYGCPPHAGGGI 512

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+VS+FP
Sbjct: 513 GMERVVMLYLGLDNIRKVSMFP 534


>gi|170115146|ref|XP_001888768.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636244|gb|EDR00541.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 560

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 118/281 (41%), Gaps = 25/281 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR+ GWVHR+R    IIF+ +RD  G  Q V +   A    A ++  E  + + G + + 
Sbjct: 131 VRVFGWVHRLRQQKDIIFIVVRDGTGYLQTVLSGRVAQTYEALTLTLESSVEVVGTLQT- 189

Query: 81  SAETINANIITGQIELSAQKIEILSV---AEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                      G  EL      ++     AE+       E+  P SI+   R L LR +T
Sbjct: 190 ---VPEGKTAPGGHELVVDYWRVVGPAPGAEDAFTNRLNEKSDP-SIQADLRHLVLRGET 245

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  ++ + R  + A++ IE + P L  +  EG           Q +F  L Q+
Sbjct: 246 ASSVLRLRAALLIAFRDSLTAQSLIEVTPPCLVQTQVEGGATLFKLDYYGQPAF--LTQS 303

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  + S  D  F +   FR E+  + R   E+  L+ E++F+   D+++ +E ++
Sbjct: 304 SQLYLETCLPSLGD-VFCVQESFRAENSHTRRHLSEYTHLEAELAFITFTDLMDHIEEII 362

Query: 258 RGVFEEF--------------SNGNTVSNNFLRICYDDAIR 284
                                 N  T S  FLR+ Y DAI+
Sbjct: 363 CNTVSILLANPTSASLIKSLNPNFITPSRPFLRLSYVDAIK 403


>gi|164663385|ref|XP_001732814.1| hypothetical protein MGL_0589 [Malassezia globosa CBS 7966]
 gi|159106717|gb|EDP45600.1| hypothetical protein MGL_0589 [Malassezia globosa CBS 7966]
          Length = 995

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 7/168 (4%)

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
           +PV  +R      R   R +DLR  T+   ++  + I    R  +    FIE  TP L  
Sbjct: 305 VPVITQR-----TRLSNRLVDLRTPTMQAVVMIPSVICREFRQYLSQHEFIEIHTPKLQG 359

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
            + E        +   + +F A  Q+PQ YKQ+ +A+   R F+I P FR E+  + R  
Sbjct: 360 GASESGASVFDVAYFGRSAFLA--QSPQLYKQMCIAADMRRVFEIGPVFRAENSNTARHL 417

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
            E+  LD+EM      D ++ ++ +L+ +F    +       F+R  Y
Sbjct: 418 TEYTGLDLEMEINHYYDAMSLIDRMLKHIFTVLRDKYGHVTQFIRRHY 465



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI +GG R H ++++    S + +    +E+   G    F+ G PPH G   
Sbjct: 555 FDIFLRGQEICTGGQRIHHAQMLEDNISRLHMDASSLEDYLEG----FRLGAPPHAGCGL 610

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R+VML L   ++R  SLF
Sbjct: 611 GLERLVMLYLNLDDIRLASLF 631


>gi|303234996|ref|ZP_07321620.1| lysine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302493851|gb|EFL53633.1| lysine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 636

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 135/283 (47%), Gaps = 24/283 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+++G +   R HG + F+D+ D  G  Q+    +    E    V++  +  I G+ 
Sbjct: 49  GKEVKIAGRIMSKRGHGKVNFMDLHDSLGRIQLFNKVNELGEENYAKVKNMDIGDIVGV- 107

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136
                E       +G+I +  + + +LS + + LP    G ++ P+ +R++ R++DL  +
Sbjct: 108 -----EGSIFKTHSGEISIRTKSVVLLSKSLQILPEKWHGLKD-PD-LRYRQRYVDLIMN 160

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
             +    VKR+RII+++R  +    F+E  TPIL T +    AR F+          Y L
Sbjct: 161 PEIKDTFVKRSRIISAIREFLDTRGFLEVDTPILNTIAGGANARPFITHHNTLDIDMY-L 219

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + Y + L+  GFD+ +++   FR+E       P E+  +++  ++ + +D+++  E
Sbjct: 220 RIANELYLKRLIVGGFDKVYEMGRMFRNEGMDHTHNP-EYTAIELYQAYADYNDMMDITE 278

Query: 255 NVLRGVFEEFSNGNTVSN----------NFLRICYDDAIRRYG 287
            ++  V E+  NG+  S            + RI   DAI+ Y 
Sbjct: 279 QLVAFVCEKV-NGSMKSQFGETEIDFTPPWKRITMVDAIKEYA 320



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR++M+L   +++R++ LFP
Sbjct: 446 ALEVGLPPTGGLGIGVDRLIMMLTNNESIRDIMLFP 481


>gi|169844083|ref|XP_001828763.1| aspartate-tRNA ligase [Coprinopsis cinerea okayama7#130]
 gi|116510134|gb|EAU93029.1| aspartate-tRNA ligase [Coprinopsis cinerea okayama7#130]
          Length = 543

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 32/277 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAK---SVRSEWV 70
           VG  V     VH  R  G  ++FL++R      Q  ++ +P     ++ K   +V +E +
Sbjct: 91  VGQNVLFRARVHNSRAQGSKMVFLNLRQRTTSVQGLMIVSPGKVSKQMVKWAAAVPTESI 150

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPES------ 123
           + ++G V  +  E I +  ++  +E+   K+ ++S +   LP  V  +   PE+      
Sbjct: 151 VLVEGTV-EKVDEPIKSASVS-DVEVHISKMHLISGIDGRLPFTV-EDANRPETAAEAAD 207

Query: 124 ---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                     R   R +DLR  T       +  I +  R  +    FIE  +P L  ++ 
Sbjct: 208 AQFNRVLLETRLNNRVVDLRTQTNQAIFKLQGAIGDLFRDYLRQHGFIEIHSPKLQGAAT 267

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           E              +F A  Q+PQ  KQ+ +A+ F+R ++I P FR ED  + R   EF
Sbjct: 268 ESGASVFKVGYFKGNAFLA--QSPQLAKQMAIAADFERVYEIGPVFRAEDSNTHRHLTEF 325

Query: 235 YQLDMEMSFVEQ-DDILNTME----NVLRGVFEEFSN 266
             LD+EM+  E   +++  ++    N+ RG+ +++ +
Sbjct: 326 IGLDLEMAIEEHYHEVMEMLDGMLVNIFRGLRDQYKD 362



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 14/114 (12%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF TMP     +L  +         YD    G EI SG  R H   ++ +   
Sbjct: 435 KFPMALRPFYTMPDPEDPTLSNS---------YDFFMRGEEILSGAQRIHDPTLLCEKMR 485

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + G+  + ++        AF+ G PPHGG   G++R++ML L   NVR  SLFP
Sbjct: 486 SKGVEPDSMKP----YVDAFRLGCPPHGGGGIGLERVLMLFLKLNNVRRASLFP 535


>gi|329123659|ref|ZP_08252219.1| aspartate--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327469858|gb|EGF15323.1| aspartate--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 93

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/86 (38%), Positives = 51/86 (59%)

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           F  +GI +E    +FG L  A + G PPH G+A G+DR+ MLL G +N+R+V  FP +  
Sbjct: 6   FRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFPKTTA 65

Query: 568 FCDLLMGSPSTVSVEQLRELGLRIVE 593
              L+  +PS  + + L EL + +V+
Sbjct: 66  AACLMTEAPSFANPQALEELAISVVK 91


>gi|314954465|gb|EFS98871.1| lysyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
          Length = 1081

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGGIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|32035006|ref|ZP_00135078.1| COG1190: Lysyl-tRNA synthetase (class II) [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208285|ref|YP_001053510.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|165976226|ref|YP_001651819.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|303251193|ref|ZP_07337372.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|303252272|ref|ZP_07338438.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247791|ref|ZP_07529828.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307250030|ref|ZP_07531998.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307252383|ref|ZP_07534280.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307254631|ref|ZP_07536462.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307256857|ref|ZP_07538635.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|307259082|ref|ZP_07540812.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|189082343|sp|A3N0G9|SYK_ACTP2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710880|sp|B0BP90|SYK_ACTPJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|126097077|gb|ABN73905.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
 gi|165876327|gb|ABY69375.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|302648731|gb|EFL78921.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|302649927|gb|EFL80104.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306855734|gb|EFM87900.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306857952|gb|EFM90040.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306860305|gb|EFM92321.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306862426|gb|EFM94389.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306864591|gb|EFM96496.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306866749|gb|EFM98607.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
          Length = 500

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 19/278 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  I+D  G  Q+    D+    +     S W L   G ++  
Sbjct: 64  VKVAGRIMLKRVMGKASFFTIQDVSGQIQLYVARDNLAEGVYADKVSMWDL---GDIVGV 120

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
           +         TG++ +   ++E+L+ +   PLP   +    +  R++ R+LDL   +   
Sbjct: 121 AGTLFKTK--TGELTVRCSEVELLTKSLR-PLPNKVQGLTDQETRYRQRYLDLISNEESR 177

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  + R+++++ +R   + ++FIE  TP+L        A+ F+          Y L  AP
Sbjct: 178 RTFMIRSKVVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMY-LRIAP 236

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F++   FR+E       P EF  ++   ++ +  D+++  E +LR
Sbjct: 237 ELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELLR 295

Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
            +  +     TV            F RI   DAI +YG
Sbjct: 296 KLAIDILGTTTVPYGEYVFDFGKPFERITMHDAIVKYG 333



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M+   A ++R+V LFP
Sbjct: 460 ALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILFP 495


>gi|314914790|gb|EFS78621.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
          Length = 1081

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H   D+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLSDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|302871283|ref|YP_003839919.1| lysyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574142|gb|ADL41933.1| lysyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 495

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 118/253 (46%), Gaps = 20/253 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G FV ++G +   R HG   F+DI D  G  Q+    D    E  +  +  + +   G +
Sbjct: 56  GKFVCVAGRMLSKRGHGKASFVDILDTKGKIQIYIKIDEVGEEKYQEFKEYYDI---GDI 112

Query: 78  MSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL--- 133
           +    E    +   G++ + A++IE+L+     LP    G R+     R++ R+LDL   
Sbjct: 113 IGVKGEVFKTH--KGEVSIKAKEIEMLTKCLRPLPEKWHGLRDV--DTRYRKRYLDLIVN 168

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
              RDT     +KR+ II S+R  +    F+E  TP+L+  +    AR F+         
Sbjct: 169 PQVRDTF----IKRSLIIRSIRKFLDDRGFLEVETPVLSPIAGGAAARPFITHHNALDID 224

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + + + L+  GFD+ +++   FR+E       P EF  +++  ++ +  D++
Sbjct: 225 LY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIYQAYADYKDMM 282

Query: 251 NTMENVLRGVFEE 263
           +  E ++  V +E
Sbjct: 283 DLTEELITTVAQE 295



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 454 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFP 489


>gi|332288941|ref|YP_004419793.1| lysyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330431837|gb|AEC16896.1| lysyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 502

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 122/282 (43%), Gaps = 21/282 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G +   R  G   F+ ++D  G  Q+    D     + + V  E +  +D G ++ 
Sbjct: 63  VSVAGRIMTRRKMGKASFITLQDMSGKIQLYVARDL----LPEGVYEEIMAMLDLGDIVG 118

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138
                      T ++ +    +E+L+ A   PLP        + +R++ R+LDL   +  
Sbjct: 119 AKGTLFKTK--TNELTVRCTALELLTKALR-PLPDKFHGLADQEMRYRQRYLDLISNEES 175

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            +  + R+++I  +R   I + FIE  TP+L        AR F+          Y L  A
Sbjct: 176 RRTFIIRSKVIAGIREYFIGKGFIEVETPMLQVIPGGAAARPFITHHNALDIDMY-LRIA 234

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E       P EF  ++   ++ +  D+++  E +L
Sbjct: 235 PELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELL 293

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDK 290
           R +  +      V            F RI   DA+ +YG DK
Sbjct: 294 RKLALDILGTTIVPYGEYEFDFGKPFERITMHDAVLKYGADK 335



 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F+    +KE  ++    +++      A + G+P
Sbjct: 410 RFELFIGGREIGNGFSELNDAEDQNERFNAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 467

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A+++R+V LFP
Sbjct: 468 PTAGEGLGIDRLAMLFANAESIRDVILFP 496


>gi|315079610|gb|EFT51603.1| lysyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
          Length = 1081

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGGIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V   D LV + +        ++  +E+++ ++   S+    PLP           + 
Sbjct: 686 HA-VSLGDHLVATGTVGASRNGTLS--LEMTSWRLAAKSLR---PLPSRRSGFNDPEAKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD------ 238
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+      
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 239 --MEMSFVEQDDILNTMENVLRGV 260
             ++M  + ++ IL+   N   G 
Sbjct: 858 DYVQMRHLTREMILSAARNATGGT 881



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 1075


>gi|190150137|ref|YP_001968662.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307263473|ref|ZP_07545088.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|238692391|sp|B3H1E8|SYK_ACTP7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189915268|gb|ACE61520.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306871116|gb|EFN02845.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 500

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 19/278 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  I+D  G  Q+    D+    +     S W L   G ++  
Sbjct: 64  VKVAGRIMLKRVMGKASFFTIQDVSGQIQLYVARDNLAEGVYADKVSMWDL---GDIVGA 120

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
           +         TG++ +   ++E+L+ +   PLP   +    +  R++ R+LDL   +   
Sbjct: 121 AGTLFKTK--TGELTVRCSEVELLTKSLR-PLPNKVQGLTDQETRYRQRYLDLISNEESR 177

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  + R+++++ +R   + ++FIE  TP+L        A+ F+          Y L  AP
Sbjct: 178 RTFMIRSKMVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMY-LRIAP 236

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F++   FR+E       P EF  ++   ++ +  D+++  E +LR
Sbjct: 237 ELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELLR 295

Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
            +  +     TV            F RI   DAI +YG
Sbjct: 296 KLAIDILGTTTVPYGEYVFDFGKPFERITMHDAIVKYG 333



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M+   A ++R+V LFP
Sbjct: 460 ALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILFP 495


>gi|291546775|emb|CBL19883.1| aspartyl-tRNA synthetase, archaeal type [Ruminococcus sp. SR1/5]
          Length = 443

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G E+ +GG R H  +++    +  G+ +E +E         F+ GMPPHGG
Sbjct: 355 TLSFDLLFKGLEVTTGGQRIHDYQMLKDKIAARGMDEEGMEQYLD----TFKHGMPPHGG 410

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +  G++R+ M +LG +NVRE  LFP   N
Sbjct: 411 LGIGLERLTMQILGEENVRETCLFPRDMN 439



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 91/224 (40%), Gaps = 13/224 (5%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           + G +H +R  G + F+ +R   G+ Q V   D     I     +  V     L     A
Sbjct: 30  VEGAIHSIRNMGDVAFVILRKKEGLFQTVYENDKTNVSIHDLKEAMCVRLTGTLHEEERA 89

Query: 83  ETINANIITGQIELSAQKIEILSV-AEELPLPVFGER-EYPESIRFKYRFLDLRRDTLHK 140
                       EL    +EILS  AE LPL +   +       +  YR + LR      
Sbjct: 90  PHGR--------ELRISHVEILSSPAESLPLAIDKWKLNTSLEAKLNYRPIALRNVQERA 141

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
               +  ++ + R  +  + F E  TP + A   EG  +    S  ++ +   L Q+PQ 
Sbjct: 142 KFKIQEALVRAFRDYLYEKGFTEIHTPKIGARGAEGGANLFKLSYFHKPA--VLAQSPQF 199

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           YKQ+ M   FDR F+  P FR E   + R   E+  LD EM ++
Sbjct: 200 YKQM-MVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGYI 242


>gi|290992025|ref|XP_002678635.1| asparaginyl-tRNA synthetase [Naegleria gruberi]
 gi|284092248|gb|EFC45891.1| asparaginyl-tRNA synthetase [Naegleria gruberi]
          Length = 588

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 17/261 (6%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI 61
           R + H   D      G  V++SGW HR+R  G G++F+ +RD  G  Q V +        
Sbjct: 144 RIKVHQVKDFE----GKRVQVSGWCHRLRIQGKGLLFITLRDGTGFLQTVLSGVLCQTYE 199

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A ++  E  + I G V +     +   ++    +L      + S  E LP   FGE    
Sbjct: 200 ALTLHLESSVTIKGTVKADPRAPMGFELVADYWKL------VGSSPESLP---FGEDVKD 250

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +I    R L LR +     +  R+ I+   R    +  + E + P +  +  EG     
Sbjct: 251 PNILLDQRHLILRGEKTSAILKMRSIILQCFREHYYSRGYTEITPPTMVQTQVEGGSTLF 310

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + ++  L Q+ Q Y + ++ +  D  F IA  +R E   + R   EF  ++ E 
Sbjct: 311 KFDYFGEDAY--LTQSSQLYLETVIPALGDS-FCIAQSYRAEKSDTPRHLSEFTHVEAER 367

Query: 242 SFVEQDDILNTMENVLRGVFE 262
            F+  +D+LNT+E+++  V E
Sbjct: 368 PFITFEDLLNTLEDLVCDVTE 388


>gi|154151870|ref|YP_001405488.1| lysyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|154000422|gb|ABS56845.1| lysyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 514

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 22/273 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSV--RSEWVLCIDG 75
           V  +G +  +R HG  IF D+ D  G  Q+    A+     F+       R ++V     
Sbjct: 58  VVTAGRLSIIRNHGKTIFADLGDESGKIQLYIRKADLGDEAFDFFNQYIERGDFVGVTGH 117

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-R 134
           +  ++           G+I +   KI++L+ A   PLP           R++ R++DL  
Sbjct: 118 VFRTK----------LGEITIWVDKIQLLTKA-VCPLPEKFHGLTDVEKRYRQRYVDLIA 166

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSR-VNQGSFY 192
            + + +N   R+RI++S+R  +   +F+E  TPIL        AR F      + Q  F 
Sbjct: 167 NEEVRQNFRNRSRILSSIRRYLSERDFLEFETPILQPVYGGANARPFTTFHNCLGQKLFL 226

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y + L+  GF+R F+IA  FR+ED  +   P EF  +++  ++ +  D+++ 
Sbjct: 227 RI--APELYLKRLVVGGFERIFEIARNFRNEDIDTHHNP-EFTMVEIYWAYHDVYDMMDL 283

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            E+ L  + +E  N   ++     I +   +RR
Sbjct: 284 TEDFLATLVQEVHNKTEITFEGTSISFAKPLRR 316



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP GG+  GIDR+VMLL G  +++EV LFP
Sbjct: 453 ALGYGMPPTGGVGIGIDRLVMLLTGNNSIKEVILFP 488


>gi|195427261|ref|XP_002061695.1| GK17133 [Drosophila willistoni]
 gi|194157780|gb|EDW72681.1| GK17133 [Drosophila willistoni]
          Length = 548

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 121/296 (40%), Gaps = 25/296 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI 61
           R R    G  G    GS V++ GWVHR+R  G  ++F+ +RD  G  Q V          
Sbjct: 114 RIRIREIGTHG----GSRVKVFGWVHRLRRQGKALMFVTLRDGTGFLQSVLTDLRCQTYE 169

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  + +E  + + G++        +     G +EL     E++ +A           E  
Sbjct: 170 ALMLSTESAVALYGVLKP----VPDGKSAPGDLELHVDFWELIGLAPPGGADAILNEEAH 225

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             ++   R + +R +   K +  R+ ++ + R       + E + P L  +  EG     
Sbjct: 226 PDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRAHYEDRGYNEVTPPTLVQTQVEGGSTLF 285

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E 
Sbjct: 286 KMQYFGEEAF--LTQSSQLYLETCLPALGD-VFTIAQSYRAEQSRTRRHLAEYTHIEAEC 342

Query: 242 SFVEQDDILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAIR 284
            F+  DD+L  +E+        VL+G     V+E   +       F R+ Y DAI+
Sbjct: 343 PFISYDDLLTRLEDLVCDVVDRVLKGPYGQLVYELNPDFKAPKRPFRRMDYADAIK 398


>gi|304408354|ref|ZP_07390001.1| lysyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304342643|gb|EFM08490.1| lysyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 494

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 12/252 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           GVSD+     ++G V  +R  G I+F+ I+   G  Q+    D    E +     ++V  
Sbjct: 43  GVSDIA----VAGRVRSIRHMGQIVFVTIQSVRGRLQLFVRKDELG-EGSFDAFIQYVDT 97

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            D +  S +  T  A    G+  L     + L  +   P+P          +R++YR+LD
Sbjct: 98  GDWIGASGTMFTTKA----GEKTLRVVGYQFLGKSLH-PMPDKWSGMTNTELRYRYRYLD 152

Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           +   D     +++RT ++ S+R  +  + F+E  TPIL  S+        V      G  
Sbjct: 153 MWLSDETSSRLLRRTSMLRSLRAFLDNKGFLEVDTPILQHSASGALAKPFVTHHHALGQD 212

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  AP+ Y + L+A GF + +++A CFR+E      L  EF  ++   +F   +D + 
Sbjct: 213 MYLRIAPETYLKRLVAGGFTKLYEVAKCFRNEGISPQHLQ-EFTMVEGYSAFENYEDAMA 271

Query: 252 TMENVLRGVFEE 263
            ++ +L+ +  E
Sbjct: 272 LIQEMLQYLLSE 283



 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 27/42 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           RA + GMPP  G   GI+R++M++  + N++E   FP+ ++ 
Sbjct: 445 RAMEYGMPPIAGWGFGIERLLMIVTDSPNIKECVYFPLVRSM 486


>gi|317132068|ref|YP_004091382.1| aspartyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315470047|gb|ADU26651.1| aspartyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 437

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 104/257 (40%), Gaps = 32/257 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            G   R+ G+VH +R  G   FL +R      Q V NP  +        ++      +G 
Sbjct: 20  AGKNARIKGFVHNIRDMGEFSFLILRTGAYTLQCVYNPTYS--------KTPLDGLREGT 71

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            +    E ++        EL      ++S   E         EYP +I  KY  L++  +
Sbjct: 72  CIEVCGEAVDEPRAQNGFELHIVDFTVISSPAE---------EYPFAINKKYLNLNIDTN 122

Query: 137 TLHKNIVKRT-----------RIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             H+ +  R             + +     M    F +  TP + ++  EG  +      
Sbjct: 123 LDHRPLTLRNPRQRAIFKIQEAVADGFADFMRQNGFTQMHTPKIVSAGAEGGANIFHLDY 182

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            +  +F  L Q+PQ YKQ+ M   F+R F+IAP FR E   + R   E+  LD EM F+ 
Sbjct: 183 FDTKAF--LNQSPQFYKQM-MVGVFERVFEIAPVFRAEKHHTSRHLNEYVGLDFEMGFIS 239

Query: 246 -QDDILNTMENVLRGVF 261
             +D++     +LR +F
Sbjct: 240 GMEDVMAMETAMLRHLF 256



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  +DL+  G EI +GG R H     +     +G+        F     A + G+PPHGG
Sbjct: 349 ALSFDLLFRGLEITTGGQRIHDYNEQVDKMRRMGLDPA----DFASYLMAHKYGLPPHGG 404

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R+VM L+G KNVRE SLFP
Sbjct: 405 LGIGLERLVMKLMGLKNVREASLFP 429


>gi|300722131|ref|YP_003711414.1| lysine tRNA synthetase, constitutive [Xenorhabdus nematophila ATCC
           19061]
 gi|297628631|emb|CBJ89209.1| lysine tRNA synthetase, constitutive [Xenorhabdus nematophila ATCC
           19061]
          Length = 504

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 121/253 (47%), Gaps = 12/253 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + ++G  V ++G +   R  G   F  ++D  G  Q+  + D     I  +   +W L  
Sbjct: 60  LEELGIEVTVAGRMMTRRIMGKASFATLQDMGGRIQIYVSRDDLPEGIYNTQFKKWDL-- 117

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 118 -GDILGARGKLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 173

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D   K    R+R+++++R  M +++F+E  TP++ A  P GA  R F+         
Sbjct: 174 ISNDESRKAFQIRSRVMSALRNFMTSKDFMEVETPMMQAI-PGGASARPFITHHNALDID 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++
Sbjct: 233 MY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYQDLI 290

Query: 251 NTMENVLRGVFEE 263
              E + R + +E
Sbjct: 291 VLTEELFRTLTQE 303



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 463 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 498


>gi|326792441|ref|YP_004310262.1| lysyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326543205|gb|ADZ85064.1| Lysyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 509

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 129/281 (45%), Gaps = 24/281 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + + ++G +   R  G   F+ I+D  G  Q     D    E     +   +  I G+  
Sbjct: 71  THLSVAGRIMAKRDMGKASFITIQDQEGRIQSYVRKDELGDEDYADFKKYDIGDIVGI-- 128

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD- 136
               E        G+I + A+ + +LS + + LP    G ++    +R++ R++DL  + 
Sbjct: 129 ----EGYIFRTQKGEISVRAKSVTLLSKSLQILPEKYHGLKDT--EMRYRQRYVDLIVNP 182

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
            +    +KR+ II SMR  +  ++FIE  TP+L + +    AR F+          Y + 
Sbjct: 183 EVKDTFLKRSAIIRSMRNFLDNKDFIEVETPVLHSIAGGAAARPFVTHHNALDIDMY-MR 241

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+   + L+  GFDR ++I   FR+E   S R   EF  +++  +F + +D+++  E 
Sbjct: 242 IAPELKLKRLIVGGFDRVYEIGRVFRNEG-MSIRHNPEFTIMELYQAFADYNDMMDITEE 300

Query: 256 VLRGVFEEFSNGNTV----------SNNFLRICYDDAIRRY 286
           ++R V +E  NG  V             F RI   DA+++Y
Sbjct: 301 MIRHVCKEV-NGTAVIEYDGVTIDLDKPFARISMVDAVKQY 340



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 467 ALEYGLPPTGGLGVGVDRLVMLLTNSASIRDVLLFP 502


>gi|300172738|ref|YP_003771903.1| lysyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887116|emb|CBL91084.1| Lysyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 493

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 122/265 (46%), Gaps = 27/265 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCIDGLVM 78
           V ++G +   R  G +IF D RD  G  Q+ A  D     + I K       L I G+VM
Sbjct: 62  VIIAGRMIAKRGAGKVIFADFRDVSGKIQMYAKRDDLGENYPIIKRADLGDFLGIKGIVM 121

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
              A         G++ + A ++  L+ A   P+P           R++ R+LDL   + 
Sbjct: 122 KTEA---------GELTILATELTHLTKALR-PMPDKFHGIADVETRYRKRYLDLIANEE 171

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
             K    R++II+++R  M +++F+E  TPIL T +    AR F+          Y +  
Sbjct: 172 SFKKFQLRSKIISAIRGYMDSQDFMEVETPILQTEAGGAAARPFITHHNALNIDMY-MRI 230

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           A + Y + L+  GF+R +++   FR+E  DP+ +    EF  ++   ++++  D+++  E
Sbjct: 231 ATELYLKRLVVGGFERVYEMGRIFRNEGMDPKHN---PEFTTMETYAAYMDFTDVMDETE 287

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICY 279
            +       F     V ++ L++ Y
Sbjct: 288 GI-------FKAAAAVVSDDLKVTY 305



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  +  +R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSDTIRDVLLFP 490


>gi|284048762|ref|YP_003399101.1| lysyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952983|gb|ADB47786.1| lysyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 664

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 130/280 (46%), Gaps = 20/280 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ V+++G +  +R HG   F+D++D  G  Q+    D    E+ +   S   L   G +
Sbjct: 67  GTVVKVAGRLLAIRGHGKTCFMDLQDKTGKIQLYVRKD----EMGEDAYSVVKLLDIGDI 122

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +         ++  G+  +  QK+E LS A + PLP        + IR++ R++DL  + 
Sbjct: 123 VGVEGPVFKTHM--GEPSIRVQKLEFLSKALK-PLPEKWHGLKDKEIRYRQRYVDLIVNP 179

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
             +++ VKRT+II  +R  +  + ++E  TP+L T S    AR F+          Y L 
Sbjct: 180 EVRDVFVKRTQIIKCIRQVLDDQGYLEVETPVLNTISGGATARPFITHHNALDIDLY-LR 238

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A +   + L+  G +R +++   FR+E       P EF  L+   +F + + +++  E 
Sbjct: 239 IATELNLKRLVVGGLERVYELGRVFRNEGMDIKHNP-EFTTLECYEAFGDFNTMMDLTEK 297

Query: 256 VLR-------GVFEEFSNGNTV--SNNFLRICYDDAIRRY 286
           ++        G  +    G  +  +  + R+   DA+++Y
Sbjct: 298 IVTTCAEKVLGTLKIQYEGTEIDLTGPWPRMTMIDAVKKY 337



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   G+PP GG+  GIDR+VM L GA ++R+V LFP
Sbjct: 464 ALMHGLPPTGGLGIGIDRLVMFLTGAVSIRDVLLFP 499


>gi|218549238|ref|YP_002383029.1| lysyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|218356779|emb|CAQ89407.1| lysine tRNA synthetase, inducible [Escherichia fergusonii ATCC
           35469]
 gi|324114245|gb|EGC08218.1| lysyl-tRNA synthetase [Escherichia fergusonii B253]
 gi|325497656|gb|EGC95515.1| lysyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 505

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 131/287 (45%), Gaps = 23/287 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRKFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDL 293
           R + ++      V+           F ++   +AI++Y   TD  DL
Sbjct: 299 RTLAQDVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADL 345



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 499


>gi|197285859|ref|YP_002151731.1| lysyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227356360|ref|ZP_03840748.1| lysyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|238693207|sp|B4F0M6|SYK_PROMH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|194683346|emb|CAR44053.1| lysyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227163470|gb|EEI48391.1| lysyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 504

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 122/264 (46%), Gaps = 12/264 (4%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   S  +L  ++V   V ++G +   R  G   F  ++D  G  Q+  + D     +
Sbjct: 50  QKYDAMSAEELDAANVE--VAIAGRMMTRRIMGKASFATLQDMGGRIQLYVSRDDLPEGV 107

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 +W L   G ++            TG++ +   ++ +L+ A   PLP        
Sbjct: 108 YNEQFKKWDL---GDILGGRGRVFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLAD 161

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           +  R++ R+LDL  +   +N  K R++I++++R  M+ + F+E  TP++ T      AR 
Sbjct: 162 QETRYRQRYLDLISNENSRNTFKIRSKIMSAIRQFMVNKGFMEVETPMMQTIPGGASARP 221

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  +++
Sbjct: 222 FITHHNALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGV-SPRHNPEFTMMEL 279

Query: 240 EMSFVEQDDILNTMENVLRGVFEE 263
            M++ +  D++   E + R + ++
Sbjct: 280 YMAYADYRDLIELTEELFRTLTQD 303



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 463 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 498


>gi|332086814|gb|EGI91950.1| lysyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 505

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 130/288 (45%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        + +R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
            + ++      V+           F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMHEAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|222055387|ref|YP_002537749.1| asparaginyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221564676|gb|ACM20648.1| asparaginyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 461

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 108/273 (39%), Gaps = 29/273 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           R   C  L   + G  + + GW   VR    + FL + D   I   QVV  PD   +   
Sbjct: 4   RIRICDALTAKEAGGELLVKGWARTVRAGKDVAFLAVNDGSCIANLQVVVEPDIVNYPEV 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYP 121
             + +   + + G++    A         GQ  ELSA +IEI+  A+E   P+  +R   
Sbjct: 64  SRLGTGSAVAVRGVLRESPA--------AGQRYELSATQIEIIGQADE-SYPLQKKRHSF 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R     L  R +T       R+ +  ++        F+   TPI+TA+  EGA +  
Sbjct: 115 EYLR-TIAHLRPRTNTFGAVFRVRSSLAQAIHRFFAERGFLYVHTPIITANDCEGAGELF 173

Query: 182 VPSRVN-------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDP 225
             + +N              G F+A         QL   L A  F   +   P FR E+ 
Sbjct: 174 RVTTLNMAKPPLKAGEVDYSGDFFAQATGLTVSGQLEGELFAQAFSNIYTFGPTFRAENS 233

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            + R   EF+ ++ EM+F +        E+ L+
Sbjct: 234 NTARHAAEFWMIEPEMAFADLMADAALAEDFLK 266



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 10/79 (12%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF---QCGMPPHGGIAAGIDRI 546
           EI  G  R    +++L+    +GI++E       GL+      + G  PH G   G +R+
Sbjct: 384 EIIGGSQREERFDLLLERMGELGINEE-------GLWWYLDSRRWGSCPHAGFGLGFERL 436

Query: 547 VMLLLGAKNVREVSLFPMS 565
           +M L G +N+R+V  FP +
Sbjct: 437 LMYLTGMENIRDVIPFPRT 455


>gi|328875378|gb|EGG23743.1| aspartyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 567

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 5/146 (3%)

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSM-RCRMIAENFIECSTPILTASSPEGA 177
           E  +  R   R LDLR    H+ I K    +  + R  ++  +F+E  +P + +S+ E  
Sbjct: 240 EVSQDKRLDNRVLDLRVPA-HQAIFKLQSAVGLLFREYLVGRDFVEIHSPKMISSASESG 298

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                    +  +F  L Q+PQ YKQ+ + +  +R F+I P FR E+  + R   EF  L
Sbjct: 299 ASVFKLGYFDTHAF--LAQSPQFYKQMAICADMERVFEIGPVFRAENSFTHRHLTEFVGL 356

Query: 238 DMEMSFVEQ-DDILNTMENVLRGVFE 262
           D+EM+F E   ++L+ ++N++  +FE
Sbjct: 357 DIEMTFREHYHEVLDELDNLMTSIFE 382



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 13/105 (12%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +TMP         N++L   A  YDL   G EI SG  R H + ++ ++  N GI+ + +
Sbjct: 468 YTMPDP-------NNVLLANA--YDLFMRGEEICSGAQRIHDAVMLEESAKNHGINIQSI 518

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +        AF+ G  PH G   G++R+VML +G  N+R+ SLFP
Sbjct: 519 Q----AYIDAFKFGASPHAGGGVGLERVVMLYMGLGNIRKTSLFP 559


>gi|307245669|ref|ZP_07527755.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306853371|gb|EFM85590.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
          Length = 500

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 19/278 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  I+D  G  Q+    D+    +     S W L   G ++  
Sbjct: 64  VKVAGRIMLKRVMGKASFFTIQDVSGQIQLYVARDNLAEGVYADKVSMWDL---GDIVGV 120

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
           +         TG++ +   ++E+L+ +   PLP   +    +  R++ R+LDL   +   
Sbjct: 121 AGTLFKTK--TGELTVRCSEVELLTKSLR-PLPNKVQGLTDQETRYRQRYLDLISNEESR 177

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  + R+++++ +R   + ++FIE  TP+L        A+ F+          Y L  AP
Sbjct: 178 RTFMIRSKVVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFVTHHNALDVDMY-LRIAP 236

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F++   FR+E       P EF  ++   ++ +  D+++  E +LR
Sbjct: 237 ELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELLR 295

Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
            +  +     TV            F RI   DAI +YG
Sbjct: 296 KLAIDILGTTTVPYGEYVFDFGKPFERITMHDAIVKYG 333



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M+   A ++R+V LFP
Sbjct: 460 ALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILFP 495


>gi|310791929|gb|EFQ27456.1| aspartyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 889

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 12/259 (4%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ-VVANPDSACFEIAKSV 65
           + G+    D+G+ V     +H  R     + FL  RD     Q V+A+      +  + +
Sbjct: 127 TIGEAVKLDIGTKVTFRARIHTQRNISKHLDFLLFRDQTDTVQGVLAHATPNMVKWVQHL 186

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E ++ + G +     +  +A+     +E+    I +L+ A+    P F     P+S+ 
Sbjct: 187 HPESIVQVSGTLKKPVQDVKSAHY--HDVEVDIYSIHLLNPAK---APPFSNYMPPDSMN 241

Query: 126 FKY--RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           F+   R LDLR  +       R  I    R  +    FIE  TP L  ++ E   +    
Sbjct: 242 FRLNNRILDLRHPSNQALFRVRAMITRQFRETLDNSGFIEIQTPKLQPAATESGAEVFKL 301

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +   + +F A  Q+PQ  KQ+ +++ F + ++I P FR E+  + R   E+  LD+EM  
Sbjct: 302 NYFGRRAFLA--QSPQLAKQMTISADFGKVYEIGPVFRAENSNTHRHLTEYTGLDIEMKI 359

Query: 244 VEQ-DDILNTMENVLRGVF 261
            +   +I+  ++  L+ +F
Sbjct: 360 QKHYHEIIKVLDQTLKNIF 378



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI +GG R +  + + +  +  GIS    E+       AF  G PPHGG   
Sbjct: 476 FDIFVRGQEICTGGQRINDPKELRKNMAEKGIS----EDDMAEYLEAFDLGAPPHGGAGL 531

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G+DR+V LLL   +VR  +LF
Sbjct: 532 GLDRVVFLLLNLGDVRYGTLF 552


>gi|256062283|ref|XP_002570298.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|227294225|emb|CAY19127.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 218

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 23/160 (14%)

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
           F   W +  P  +W          H+ FT            D   +    YDLVCNG  +
Sbjct: 76  FHTDWFL--PTSQWKS-------VHHLFTAASPETAHFLYTDPSKVIGLHYDLVCNGQVV 126

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G IR H  E                E  +     A   G PPHGGIA G+D ++ + +
Sbjct: 127 GGGSIRVHNPE------------DNSCEMEY--FLTALNSGAPPHGGIALGLDLLIAIFV 172

Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            AK++R+V  FP + +  DLL G+P+ V  E L +  + +
Sbjct: 173 NAKSIRDVIAFPKAADGKDLLCGTPTMVDDEILSQYCISV 212


>gi|238897259|ref|YP_002922936.1| lysine tRNA synthetase, inducible [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|229465014|gb|ACQ66788.1| lysine tRNA synthetase, inducible [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 504

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 12/241 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L+G +   R  G   F  ++D  G  Q+  + D     I      +W L     V  R
Sbjct: 67  VILAGRMMTRRIMGKASFFTLQDTKGRIQLYVSRDDLPEGIYNEDFKKWDLGDILGVRGR 126

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
             +T      TG++ +   ++ +L+ A   PLP        +  R++ R+LDL   +   
Sbjct: 127 LFKTK-----TGELSVHCTELRLLTKALR-PLPDKFHGLLDQEARYRQRYLDLIVNEKSR 180

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           KN + R++ I+ +R  M+ + F+E  TP++  S P GA  R FL          Y L  A
Sbjct: 181 KNFILRSKTISMLRQFMMGKGFMEVETPMM-QSIPGGAAARPFLTHHNALNIDMY-LRIA 238

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GFDR F+I   FR+E   S R   EF  +++ M++ +  D++   E + 
Sbjct: 239 PELYLKRLVVGGFDRIFEINRNFRNEGI-SLRHNPEFTMMELYMAYADHQDLIELTEELF 297

Query: 258 R 258
           R
Sbjct: 298 R 298



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 72/176 (40%), Gaps = 24/176 (13%)

Query: 392 DMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK 451
           D++D +    IA         + D R     ELG I C  FE               EK 
Sbjct: 343 DLEDKNKAILIAE--------SLDVRVEKFWELGRIQCEIFE------------ETAEKH 382

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
           +         P       + ND  S  A +++    G EI +G    + +E   Q F+  
Sbjct: 383 LIQPTFITEYPAEVSPLARRNDHNSFIADRFEFFIAGKEIGNGFSELNDAEDQAQRFTEQ 442

Query: 512 GISKEVVENRFGGLYR----AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             SKE  ++      +    A + G+PP  G+  GIDR++MLL  + N+R+V LFP
Sbjct: 443 LNSKEKGDHEAMSYDQDYIIALEHGLPPTAGLGIGIDRMIMLLTNSINIRDVILFP 498


>gi|225429870|ref|XP_002283440.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 544

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 118/271 (43%), Gaps = 31/271 (11%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVAN--PDSACFEIAK---SVRSEWVLCID 74
           V + G    +R  G  I FL +R      Q V    PD     + K    +  E  + I+
Sbjct: 98  VLIRGRAQTIRAVGKNIAFLVVRQMGFTVQCVLTVAPDLVSRHMVKYATGLSRESHVDIE 157

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----FGEREYPESI------ 124
           G++   S   +     T Q+E+  +K+  +S AE LP+ +      E E  +++      
Sbjct: 158 GII---SVPGVPIKGATQQVEVQVRKLYGISKAENLPINIEDAARSESEIEKALQAGEQL 214

Query: 125 -------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                  R  YR LDLR          + ++ N  R  +++E F+   TP L   S EG 
Sbjct: 215 VRVNQDTRLNYRVLDLRTPANQAIFRVQCQVENIFRQFLLSEGFVGIHTPKLIGGSSEGG 274

Query: 178 RDFLVPSRVN-QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                  R++ +G    L Q+PQ +KQ+ +   F R F+I P FR ED  + R   EF  
Sbjct: 275 SAVF---RLDYKGQPACLAQSPQLHKQMAICGDFGRVFEIGPVFRAEDSFTHRHLCEFTG 331

Query: 237 LDMEMSFVEQD-DILNTMENVLRGVFEEFSN 266
           LD+EM   E   ++++ ++ +   +F+  + 
Sbjct: 332 LDVEMEIKEHYFEVMDIVDRLFVAMFDSLNE 362



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H+ + + +     GI  + +         +F+ G PPHGG   
Sbjct: 459 FDVFIRGEEIISGAQRVHVPDFLEKRAEACGIDVKTISTYID----SFRYGAPPHGGFGV 514

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML     N+R+ SLFP
Sbjct: 515 GLERVVMLFCALNNIRKTSLFP 536


>gi|170290813|ref|YP_001737629.1| aspartyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174893|gb|ACB07946.1| aspartyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 419

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 17/290 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIR---DHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           +R+ GWV  VR  G + F+ IR   +   IT      + + F++ +++  E V+ + G  
Sbjct: 1   MRVHGWVSEVRNLGKVRFIVIRNWNERIQITLKRGMVEDSLFDLTENLTQESVIEVVG-- 58

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRRD 136
                E      +    E+  ++I + S+A  +LPL    +       RF  R LDLRR 
Sbjct: 59  ----KEVKEKIAVGADREVIPERIIVHSLANPQLPLDPNWKVPAQVPTRFDNRPLDLRRP 114

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +       + +++ M   +    FI   TP L  ++ E   +       ++ ++  L Q
Sbjct: 115 EIQAIFKIESSLLDGMEDWLRRNGFIRVFTPALIGAASESGAEVFKVLYFDKEAY--LRQ 172

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMEN 255
            PQ ++QL +  GF+R + +   +R E  R+ R   EF  L +E++F+E + D +   E 
Sbjct: 173 DPQLHRQLTILGGFERIYDLGTNWRAELSRTPRHLSEFRSLAVELAFIENEQDTMRVEEQ 232

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           ++R   +      +     L +  D     +    P+LR P I   + E+
Sbjct: 233 IIREGIKRVVEERSKELELLNVDLDVPKVPF----PELRFPKIYEILEEY 278



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL+  G E++SGG R H  +V++      G+    +E       + F  G PPHGG A G
Sbjct: 335 DLLYKGLELSSGGQREHRYDVLISQIREKGLDPRSLE----WFTKFFAYGAPPHGGFAIG 390

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R++M +L   +V+E SLFP
Sbjct: 391 IERLLMKMLELSSVKEASLFP 411


>gi|90961666|ref|YP_535582.1| asparaginyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227890754|ref|ZP_04008559.1| asparaginyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|301300794|ref|ZP_07206978.1| asparagine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|123269944|sp|Q1WU36|SYN_LACS1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|90820860|gb|ABD99499.1| Asparaginyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227867163|gb|EEJ74584.1| asparaginyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|300851644|gb|EFK79344.1| asparagine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 433

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 16/244 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANPDSA-CFEIAKSVRSEWVLCI 73
           V   V++  W+   R  G I FL +RD     Q  VV N  S   F +AK V+ E  L +
Sbjct: 13  VNEKVKIGVWLTNKRSSGKIAFLQLRDGSAYFQGVVVKNAVSEETFALAKEVKQETSLYV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++                 E+  ++IE++  + E P+     +E+       +R L L
Sbjct: 73  TGVIHEDKRSHFG-------YEIEIEEIEVVGESNEYPI---TPKEHGTDFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +I +       E FI+   PILT S+PEG  +       ++ ++  
Sbjct: 123 RSKKQFAIMQIRNEMIRATYEFFNKEGFIKLDAPILTGSAPEGTTELFHTEYFDRDAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y++   A  + + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L   
Sbjct: 181 LSQSGQLYEEA-GAMAYGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLEIQ 239

Query: 254 ENVL 257
           E  +
Sbjct: 240 ERYV 243


>gi|26553856|ref|NP_757790.1| asparaginyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|38258377|sp|Q8EW03|SYN_MYCPE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|26453863|dbj|BAC44194.1| asparaginyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 453

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 29/274 (10%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDH---YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           S V+L GWV   R +G I F+   D    + I  V  N ++  FE AKS R+   + ++G
Sbjct: 17  SNVKLVGWVRSNRDNGSIGFISFTDGSCIHSIQLVYKNGETNNFEEAKSTRTGSAILVEG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +V+    E+   N      E+      +L  A+E   P+  +    E +R       LR+
Sbjct: 77  VVV----ESKQPN---QSFEIKVTNFILLKQADE-DYPLQKKEHGAEFLR---TIAHLRQ 125

Query: 136 DTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGA-RDFLVPSRVNQGSF- 191
            T     + R R  +  ++       NF+  S+PI+T++  EGA  +F V S+  +  F 
Sbjct: 126 RTNKYGTIMRLRSELAFAIHNFFHQNNFVWVSSPIITSNDAEGAGENFYVDSKTVKNFFG 185

Query: 192 --YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
              +L  + Q + +   A  + R +   P FR E   ++R   EF+ ++ E++F   + +
Sbjct: 186 KNASLTVSGQMHAEAY-AQSYKRVYTFGPTFRAEKSNTNRHVSEFWMVEPEIAFCNLEQL 244

Query: 250 LNTMEN--------VLRGVFEEFSNGNTVSNNFL 275
           +  +E         +L+   +E +  N +SNN L
Sbjct: 245 MYLIEEFVKYLIRFILKNCKDEMTFLNKLSNNTL 278


>gi|153005580|ref|YP_001379905.1| asparaginyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152029153|gb|ABS26921.1| asparaginyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 434

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 114/286 (39%), Gaps = 32/286 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74
           G  V L GW++  R  G + FL +RD  G  Q V    N     F  A  +  E  L + 
Sbjct: 15  GKEVTLHGWLYNRRSSGKLHFLQVRDGTGTIQCVVFKGNVSPEAFREADHLPQETSLTVT 74

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDL 133
           GLV       I         EL  + ++++++ ++E P+   G +E+  +   + R L L
Sbjct: 75  GLVKKDERSPIG-------FELDVRDLKVVALPSQEYPI---GHKEHGVAFLMEQRHLWL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +  ++R    A  F     PI T S+ EG            G  Y 
Sbjct: 125 RSQRQQVILRVRHTVEKAIRDFFDARGFTLVDAPIFTPSACEGTSTLFEVPYFELGKAY- 183

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E+++++ D  +  M
Sbjct: 184 LTQSGQLYME-AAAMALGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVAYMDLDGDMELM 242

Query: 254 ENVLRGVFE----------------EFSNGNTVSNNFLRICYDDAI 283
           E  +  V +                + S    V   F RI Y +A+
Sbjct: 243 EQFVSHVVQTALEKHRKELVAVLERDVSKLENVKPPFPRITYTEAV 288


>gi|313889087|ref|ZP_07822743.1| lysine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312844827|gb|EFR32232.1| lysine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 635

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 127/280 (45%), Gaps = 25/280 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVM 78
           V ++G +   R HG I FLD+RD  G  QV A  D     +E  K +    ++ + G+V 
Sbjct: 57  VSIAGRIMSKRRHGKICFLDLRDSEGNIQVFARKDVLEDKYEDVKGIDIGDIVGVKGIVF 116

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
              A         G+I + A  I +LS + ++    F   + P+ +R++ R++DL  +  
Sbjct: 117 KTEA---------GEITVRATDITLLSKSLQILPEKFHGLKDPD-LRYRQRYVDLIVNPE 166

Query: 139 HKNIVKRTRIINSMRCRMI-AENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
            K++  +   I       +  ++F+E  TPIL T +    AR F             L  
Sbjct: 167 VKDVFIKRNKIIKKIREFLDKKDFLEVETPILGTVAGGANARPFYTHHNTLDIDM-QLRI 225

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  GFD+ +++   FR+E   +   P EF  +++  ++V+ ++++   E++
Sbjct: 226 ANELFLKRLIVGGFDKVYEMGKMFRNEGMDTRHNP-EFTNIELYQAYVDYEEMMRITEDL 284

Query: 257 LRGVFEEFSNGNTVSNNFLRICYD---------DAIRRYG 287
              V  E    +T++     IC           DA+++Y 
Sbjct: 285 FEYVALEVLGTDTINYQGTEICLKAPWKRITMIDAVKKYA 324



 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR+++LL    ++R+V LFP
Sbjct: 450 AIEVGLPPTGGLGIGVDRMIVLLTDQPSIRDVLLFP 485


>gi|12044965|ref|NP_072775.1| asparaginyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|255660134|ref|ZP_05405543.1| asparaginyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351167|sp|P47359|SYN_MYCGE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|3844702|gb|AAC71331.1| asparaginyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078636|gb|ABY79254.1| asparaginyl-tRNA synthetase [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 456

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 132/294 (44%), Gaps = 29/294 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA------NPDSACFEIAKSVR-SEWVLCI 73
           ++LSGWV   R    IIFL I D   I  + A      NP    F + ++V  +  V+  
Sbjct: 21  IKLSGWVKNKRASANIIFLAISDGSSINTLQAVVKQEDNPQ--VFSLLQTVNLASAVMVW 78

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLD 132
             ++++  A+          +EL  +++ +L+ AE + PL    ++E+ +        L 
Sbjct: 79  GEIILTPKAKQ--------PLELKLKQVSLLAQAESDYPLQ---KKEHSQEFFRSNAHLR 127

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV----PSRVNQ 188
           +R  T    +  R+ + +++       +FI   +PILT++  EGA +  V     +  N+
Sbjct: 128 VRAKTYFAVMKIRSVLSHAIFEYFFKNDFILVQSPILTSNDCEGAGETFVIKDSETFFNK 187

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            +F  +     Q+     A  F + F   P FR E   ++R   EF+ ++ E++F    D
Sbjct: 188 TTFLTVSG---QFGAEAFAQAFKKVFTFGPTFRAEKSHTNRHLSEFWMIEPEIAFANLKD 244

Query: 249 ILNTMENVLRGVFEE-FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++  ++N+++ + ++   N +   N   +   +D I    T     + PII ++
Sbjct: 245 LMQLIQNLIKFLIKKVMENASDELNVLAKQFSNDIISNLKTIISTKKFPIIEYS 298


>gi|225389818|ref|ZP_03759542.1| hypothetical protein CLOSTASPAR_03566 [Clostridium asparagiforme
           DSM 15981]
 gi|225044128|gb|EEG54374.1| hypothetical protein CLOSTASPAR_03566 [Clostridium asparagiforme
           DSM 15981]
          Length = 647

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 136/290 (46%), Gaps = 38/290 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCID 74
           G  V ++G +   R  G   F +++D  G  Q+    D+   E  K  +   +   + + 
Sbjct: 56  GKEVSVAGRMMFKRVMGKASFCNVQDLKGSIQIYVARDNIGEEEYKGFKKMDIGDIIGVK 115

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
           G V +  A         G+I + A ++ +LS + + LP    G  +    +R++ R++DL
Sbjct: 116 GTVFTTKA---------GEISIHATELTLLSKSLQVLPEKFHGLTDT--DMRYRQRYVDL 164

Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   K+  VKR++II ++R  + ++NF+E  TP+L +++   A      +R  +  F 
Sbjct: 165 IMNAEVKDTFVKRSKIIAAIRKYLSSQNFMEVETPMLVSNAGGAA------ARPFETHFN 218

Query: 193 ALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           AL +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + 
Sbjct: 219 ALDEDLKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDY 277

Query: 247 DDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
           + ++   EN+ R V +E     T+         S  F RI   DA+++Y 
Sbjct: 278 NGMMELTENLYRYVAQEVLGTTTITYKGVEMDLSKPFERITMVDAVKKYA 327



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP
Sbjct: 453 ALEIGMPPTGGIGYGIDRMVMLLTDSAAIRDVLLFP 488


>gi|269859615|ref|XP_002649532.1| aspartyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|263511703|sp|B7XHQ4|SYDC_ENTBH RecName: Full=Probable aspartyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Aspartate--tRNA ligase; Short=AspRS
 gi|220067083|gb|EED44551.1| aspartyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 474

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 22/267 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIA--KSVRSEWVLC 72
           G+ +R+ G++  +      IF+ +RD     Q +   +   S+ +E +  K +  E  + 
Sbjct: 31  GTVIRIRGFIESITSCSSQIFILLRDRLEKVQCIIFKSTNVSSIYEFSRLKKLPLESFIE 90

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPL-----PVFGEREYPESIRF 126
           I+G V+   AE          IE+    + IL  V  +LP       + G+     +I  
Sbjct: 91  IEGQVVF--AEIPIKRATKQNIEIVISTLNILGPVVSKLPFQLKDCKIAGKESDTNTITV 148

Query: 127 KY------RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            Y      RFLD R       I    + + + R  +    FIE  T  +  S  EG  + 
Sbjct: 149 GYNLRLDNRFLDFRLPVTQSIIKIIDQTMYTFRTYLRTHEFIEIKTSKIIQSGSEGGANL 208

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +  N+ ++  L Q+PQ YKQL +  G  R ++I   +R E    +R   EF  LD+E
Sbjct: 209 FSLNYFNKPAY--LAQSPQLYKQLAIIGGLKRVYEIGHVYRAEVSNINRYLSEFVGLDIE 266

Query: 241 MSF-VEQDDILNTMENVLRGVFEEFSN 266
           M       D ++ + ++   +FE F N
Sbjct: 267 MEMETTYIDFIHFLHSLFINIFESFKN 293



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD +  G EI SG  R +  + +  A  + G++ E ++N       AF+ G PPH G   
Sbjct: 389 YDFIVRGEEILSGAQRENRYDYLKNAVIDKGLNPENLKNYL----EAFKYGAPPHIGCGI 444

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G++R +    G  ++R  SLFP   N
Sbjct: 445 GLERFLKAYFGFDDIRYFSLFPRDPN 470


>gi|27904870|ref|NP_777996.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|31077002|sp|Q89AC5|SYK_BUCBP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|27904268|gb|AAO27101.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 500

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 23/298 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q+    +       K    +W L   G ++  
Sbjct: 55  VSVAGRMTNKRIMGKSSFFILKDFEGEIQLYIQENLFALNFYKQFVKKWDL---GDILGA 111

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   +I++L+ A + PLP        +  R++ R+LDL  +    
Sbjct: 112 KGKLFKTR--TGELSIHCTEIKLLTKALK-PLPSKFHGLSDQETRYRQRYLDLISNRTLC 168

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +I K R+ I  ++R  M+ + F+E  TP++  + P GA  R F+      +   Y L  +
Sbjct: 169 SIFKIRSLIFINIRKYMLKKKFLEVETPMM-QNIPGGASARPFITHHNTLEIDLY-LRIS 226

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF++ F+I   FR+E   +   P EF  +++ M++    D++N  E +L
Sbjct: 227 PELYLKRLIVGGFNKIFEINKSFRNEGISTRHNP-EFTMMEVYMAYSNYHDMMNFTEKLL 285

Query: 258 RGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTD--KPDLRNPIIMHNVTE 304
             + +E    + V +          F R    +AI +Y       DL + + M+ + +
Sbjct: 286 MFLVKEIVGNSQVKHGTNIIDFKKKFFRCTLKEAILKYNPSIRLSDLNDEVKMNKIVK 343



 Score = 45.1 bits (105), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G+PP  G+  GIDR+ MLL   K++R+V  FP+
Sbjct: 459 ALEYGLPPTSGLGIGIDRLTMLLTNQKSIRDVIFFPI 495


>gi|68487991|ref|XP_712154.1| hypothetical protein CaO19.6702 [Candida albicans SC5314]
 gi|68488042|ref|XP_712129.1| hypothetical protein CaO19.13994 [Candida albicans SC5314]
 gi|77023058|ref|XP_888973.1| hypothetical protein CaO19_6702 [Candida albicans SC5314]
 gi|46433497|gb|EAK92935.1| hypothetical protein CaO19.13994 [Candida albicans SC5314]
 gi|46433524|gb|EAK92961.1| hypothetical protein CaO19.6702 [Candida albicans SC5314]
 gi|76573786|dbj|BAE44870.1| hypothetical protein [Candida albicans]
          Length = 552

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 11/240 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + GWVHR+R   G+ F+ +RD  G  Q V   D A  +  + +  E  + I G V+S+
Sbjct: 130 VLVQGWVHRLRVQKGLAFITLRDGTGYLQCVLTGDLAKAKQTQELTIESTVAIKG-VISK 188

Query: 81  SAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
             E   A    G +EL A   +I+++A   +E       E   P ++    R L LR ++
Sbjct: 189 LPEGKTA---PGGVELKADHYQIIALAPGGDESFTNKVQENADP-NLLLDQRHLALRGES 244

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           L   +  R     ++R     E   E + P +  +  EG           + ++  L Q+
Sbjct: 245 LSAVMKVRAAYSAAIRRFFTEEGLTEVTPPCMVQNQVEGGSTLFKLDYYGEEAY--LTQS 302

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  +AS  D Y  I   FR E   + R   E+  ++ E+ F+  +D+L  +E +L
Sbjct: 303 SQLYLETCLASLGDVYC-IQESFRAEKSHTRRHLSEYTHIEAELVFITFEDLLTHLEKLL 361


>gi|116617530|ref|YP_817901.1| lysyl-tRNA synthetase (class II) [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122272269|sp|Q03Z44|SYK_LEUMM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116096377|gb|ABJ61528.1| Lysyl-tRNA synthetase (class II) [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 495

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 29/266 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDGLVM 78
           V ++G +   R  G +IF D RD  G  QV A  D     + I K       L I G++M
Sbjct: 62  VVIAGRMVAKRGAGKVIFADFRDVSGKIQVYARRDDLADNYPIIKRADLGDFLGIKGIMM 121

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRD 136
              A         G++ + A ++  LS A   P+P           R++ R+LDL    D
Sbjct: 122 KTEA---------GELTVLATELTHLSKALR-PMPDKFHGISDVETRYRKRYLDLIANED 171

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
           +  K   +R+ II+++R  M   +F+E  TPIL T +    AR F+          Y + 
Sbjct: 172 SF-KKFQERSHIISAIRAYMDRNDFLEVETPILQTEAGGAAARPFITHHNALNIDMY-MR 229

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
            A + Y + L+  G +R ++I   FR+E  DP+ +    EF  ++   ++++  D+++  
Sbjct: 230 IATELYLKRLVVGGMERVYEIGRIFRNEGMDPKHN---PEFTTMESYAAYMDFTDVMDET 286

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICY 279
           E +       F    +V ++ L+I Y
Sbjct: 287 EGI-------FKAAASVVSDDLKITY 305



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  +  +R+V LFP
Sbjct: 455 ALEYGMPPTGGLGVGIDRLVMLLTDSDTIRDVVLFP 490


>gi|171780056|ref|ZP_02920960.1| hypothetical protein STRINF_01844 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281404|gb|EDT46839.1| hypothetical protein STRINF_01844 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 448

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 114/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+          +  F   K +
Sbjct: 15  VGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKYGEEEGTEKFNTIKHL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + I G+V   S             EL    ++I+  +E+ P+     +E+     
Sbjct: 75  SQETSILITGIVKEDSRSKFG-------YELDVTDLKIVGHSEDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDHRHLWLRSRKQMAIMQIRNAIIYATYDFFDKNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAI 283
           F+  ++ L+  E  ++ + +   +                   ++  F R+ YDDAI
Sbjct: 239 FLSHEESLDLQEAYVKALIQGALDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAI 295



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ K   E  F    R +  G  PH G   G
Sbjct: 364 LAPEGYGEIIGGSVREDDYDTLVAKMDALGMDKS--EYEFYLDLRKY--GSVPHAGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|311278190|ref|YP_003940421.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308747385|gb|ADO47137.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 506

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+ A  D     +      +W L   G +++ 
Sbjct: 69  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYAARDDLPEGVYNDQFKKWDL---GDIIAA 125

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 126 RGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLIANDESR 182

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  K R++I+  MR  M+   F+E  TP++    P GA  R F+          Y L  A
Sbjct: 183 NTFKIRSQILAGMRKFMVGRGFMEVETPMMQVI-PGGASARPFITHHNALDMDMY-LRIA 240

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 241 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 299

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295
           R + ++      V            F+++   +AI++Y   T+  DL N
Sbjct: 300 RTLAQDVLGKTEVPYGEHTFDFGKPFVKLTMREAIKKYRPETNMADLDN 348



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 465 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 500


>gi|300871937|ref|YP_003786810.1| lysyl-tRNA-synthetase LysU class II [Brachyspira pilosicoli
           95/1000]
 gi|300689638|gb|ADK32309.1| lysyl-tRNA-synthetase LysU class II [Brachyspira pilosicoli
           95/1000]
          Length = 510

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 113/247 (45%), Gaps = 19/247 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV-----LCIDG 75
           V ++G +   R  G   FL I+D  G  Q     D    E   +V  + +     + + G
Sbjct: 70  VAVAGRIMLYRVMGKSSFLTIKDSKGTIQAYIQKDKLGDEFYNTVFKKLIDIGDIVGVKG 129

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-R 134
            V             TG+I + A ++++L+ +   PLP          +R++ R++DL  
Sbjct: 130 TVFKTK---------TGEITIYASELKLLTKSLN-PLPEKFHGLTDTELRYRQRYVDLIM 179

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYA 193
            D + +  +KR+++I+++R  MI  NF+E  TP++        A+ F+        + Y 
Sbjct: 180 NDDVKEAFIKRSKMISAIREIMIENNFLEVETPMMHPLIGGAKAKPFVTHHNTLDMTLY- 238

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GFD+ F++   FR+E   +   P EF  ++  M++     ++  +
Sbjct: 239 LRIAPELYLKRLIVGGFDKVFELNRNFRNEGISTRHNP-EFTMMEAYMAYANFHKVMELV 297

Query: 254 ENVLRGV 260
           E V   V
Sbjct: 298 EEVFSKV 304



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+ +L L   ++R+  LFP
Sbjct: 469 ALEYGLPPTGGLGIGIDRMAILFLNVPSIRDTILFP 504


>gi|261328660|emb|CBH11638.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 634

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 130/265 (49%), Gaps = 16/265 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAKSVRSEWVL 71
           G  +     R++G +  +R  G ++F  +R      Q+V +  +    +  K +R+   L
Sbjct: 80  GERETSVTARVAGRITSLRDMGKMLFATVRSSGVDLQLVVHVGEHFTRDCLKQLRAS--L 137

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLP-VFGEREYPES-IRF 126
            +  +V    AE I   +  G++ L+A ++E+L+     +++  P + G  +  ++ +R+
Sbjct: 138 RVGDIV---GAEGIPCRMQRGELSLAASRVEVLAPYVCRDQVVCPDLRGFTQLQDNDVRY 194

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           +YRF+D+  + ++   I KR  ++ S+R  +   +F+E  TPIL A +S   A+ F+   
Sbjct: 195 RYRFVDMMTNRSVIDTIRKRHTVLRSLREYLDMRHFVEVETPILHAVASGANAKPFVTHH 254

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             N    + L  AP+ Y +  +  G +R ++I   FR+ED      P EF   +   ++ 
Sbjct: 255 NANNADLF-LRVAPELYLKQCVVGGMERVYEIGKVFRNEDADRSHNP-EFTTCEFYAAYH 312

Query: 245 EQDDILNTMENVLRGVFEEFSNGNT 269
             +D++   E++ R +    +NG T
Sbjct: 313 TYEDLITMTEDIFRHLALR-ANGTT 336



 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           ++ Q G+PP  G   GIDR+VMLL G+  +R+  +FP+
Sbjct: 501 KSLQVGLPPTAGWGMGIDRVVMLLSGSSTIRDGIIFPL 538


>gi|326692382|ref|ZP_08229387.1| lysyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 493

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 122/267 (45%), Gaps = 31/267 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDGLVM 78
           V ++G +   R  G IIF D+RD  G  Q+ A  D     + I K       L + G++M
Sbjct: 62  VVIAGRMIAKRGAGKIIFADLRDVSGKIQIYAKRDDLGDNYPIIKRADLGDFLGVKGIMM 121

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL--RR 135
              A            EL+    E+  + + L P+P           R++ R+LDL    
Sbjct: 122 KTEAG-----------ELTVLVTELTHLTKALRPMPDKFHGIADVETRYRKRYLDLIANE 170

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
           D+  K    R++II+++R  M +++F+E  TPIL T +    AR F+          Y +
Sbjct: 171 DSF-KKFQLRSKIISAIRAYMDSQDFMEVETPILQTEAGGAAARPFITHHNALNIDMY-M 228

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
             A + Y + L+  G++R ++I   FR+E  DP+ +    EF  ++   ++++  D+++ 
Sbjct: 229 RIATELYLKRLVVGGYERVYEIGRIFRNEGMDPKHN---PEFTTMETYAAYMDFTDVMDE 285

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICY 279
            E +       F     V ++ L++ Y
Sbjct: 286 TEGI-------FKAAAAVVSDDLKVTY 305



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  +  +R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSDTIRDVLLFP 490


>gi|237755721|ref|ZP_04584328.1| lysyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692113|gb|EEP61114.1| lysyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 577

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 119/247 (48%), Gaps = 18/247 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +  +R  G   F  I+D  G  QV  N D+   E  K      ++ I  ++   
Sbjct: 140 VAVAGRLIALRDQGKAAFGHIQDADGKLQVYFNADTLREENYKKAMD--LIDIGDII--- 194

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV----FGEREYPESIRFKYRFLDLRRD 136
             E      +TG++ +     EIL+ +   PLP       + EY    R++YR+LDL  +
Sbjct: 195 GVEGHLFRTMTGELTVEVHNYEILAKSLR-PLPEKWHGLKDTEY----RYRYRYLDLIAN 249

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYAL 194
              + I K R++ I S+R  + ++ FIE  TPIL   +S   A+ F+        + Y L
Sbjct: 250 QRTREIFKIRSKAIKSLREFLESKGFIEVETPILQPVASGAMAKPFITYHNALDMNLY-L 308

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  GF++ F+I   FR+E   +   P EF  ++   ++++ +D++   E
Sbjct: 309 RIAPELYLKMLVVGGFNKVFEIGRNFRNEGIDTTHNP-EFTMVEFYAAYLDYNDLMVLTE 367

Query: 255 NVLRGVF 261
            + R + 
Sbjct: 368 ELFRKIL 374



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 18/164 (10%)

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK-----IDFAHNPFTMPQ 463
           F  F   ARN  A+E+GI   +      I+D  F  + EE+       IDF   P  +  
Sbjct: 416 FLDFEK-ARN-FAKEVGIPKADTLTHAKILDKLFEHFVEEDLVQPTFVIDF---PKILSP 470

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASG--GIRNHMS--EVMLQAFSNVGISKEVVE 519
                    DL+     +++L+ N  E+A+    + + M   E  +Q      +  E   
Sbjct: 471 LAKTHRSYPDLVE----RFELIINKKELANAYTELNDPMDQRERFIQQIREKEMGDEEAM 526

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +       A + G+PP  G   GIDR+VM+L    ++REV LFP
Sbjct: 527 DVDETFLTALEYGLPPTAGEGIGIDRLVMMLTDNYSIREVILFP 570


>gi|309389964|gb|ADO77844.1| lysyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 493

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 24/280 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           VRL+G +  +R HG   F D+ D  G  Q+    ++   +     R E+   +D G V+ 
Sbjct: 56  VRLAGRLMAIRTHGKASFADLVDMSGKVQLYVKQNNIGED-----RYEFFQDLDLGDVVG 110

Query: 80  RSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD-T 137
            +      N   GQI +     E+L+ +   LP    G ++  + IR++ R+LDL  +  
Sbjct: 111 ITGTVFKTN--RGQISIRVASFELLTKSLRPLPEKFHGLKD--KDIRYRQRYLDLIVNPD 166

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
           + +  V R++II  MR  +  + F+E  TP++   +    AR F+          Y L  
Sbjct: 167 VKETFVIRSKIIKEMRRYLEDKGFLEVETPMMHPIAGGATARPFVTHHNALDMDLY-LRI 225

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF++ F+I   FR+E       P EF  +++  +  +  D++   EN+
Sbjct: 226 APELYLKKLIVGGFEKVFEINRNFRNEGMSYKHNP-EFTTMELYQAQADYHDMMELTENL 284

Query: 257 LRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           +  +  E  +   V            + RI   DAI++Y 
Sbjct: 285 ISYLAAEVLDTQVVEYEETEIDFTAPWDRITMVDAIKKYA 324



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR++M L  + ++R+V LFP
Sbjct: 449 RALEYGMPPTGGLGIGIDRLIMFLTNSSSIRDVILFP 485


>gi|256372660|ref|YP_003110484.1| lysyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256009244|gb|ACU54811.1| lysyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 498

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 135/288 (46%), Gaps = 41/288 (14%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           R R+       V+D    VR++G + R+R  G + F ++RD  G  Q+    D   A   
Sbjct: 33  RRRSEGLAPDTVTD--QQVRVAGRILRLRRQGRMAFGELRDASGAIQLWLRADRTQAFST 90

Query: 61  IAKS-VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER- 118
           +A S V  +WV  +DG++         A   TG+  +   +I++L+ A       FG++ 
Sbjct: 91  LADSLVLGDWV-GVDGVI---------ATTRTGERSVLVDRIQLLAHARR----SFGDKW 136

Query: 119 ---EYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                P+ +R++ R++DL  +  + +  + R+R++ ++R  + A  F+E  TPIL   +S
Sbjct: 137 RGVRDPD-VRYRQRYVDLWANPGVRERFLARSRLVRALRDELDARGFVEVETPILQPIAS 195

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLP 231
              AR F+          Y L  AP+ Y + L+  G +R F++   FR+E   PR +   
Sbjct: 196 GAAARPFVTHHNALDMDLY-LRIAPELYLKRLVVGGIERVFELGRDFRNEGISPRHN--- 251

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVL----RGVFEEFSNGNTVSNNFL 275
            EF  L+   ++ + D +    E +L    R VF     G+T   N L
Sbjct: 252 PEFTMLEAYQAYGDIDAMRELTEGLLASAARAVF-----GSTRGENEL 294



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG+  G+DR+ MLL G ++++EV LFP
Sbjct: 439 RALEYGLPPTGGLGLGVDRLAMLLTGQRHIKEVILFP 475


>gi|312128201|ref|YP_003993075.1| lysyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778220|gb|ADQ07706.1| lysyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 497

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 119/254 (46%), Gaps = 22/254 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GL 76
           G FV ++G +   R HG   F+DI D  G  Q+    D    E+ +    E+    D G 
Sbjct: 58  GKFVCVAGRMLSKRGHGKASFVDILDTKGKIQIYIKID----EVGEEKYEEFKEYYDIGD 113

Query: 77  VMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-- 133
           ++    E    +   G+I + A++IE+L+     LP    G R+     R++ R+LDL  
Sbjct: 114 IIGVKGEVFKTH--KGEISVKAKEIEMLTKCLRPLPEKWHGLRDI--DTRYRKRYLDLIV 169

Query: 134 ---RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQG 189
               RDT     +KR+ II S+R  +    F+E  TP+L+  +    AR F+        
Sbjct: 170 NPQVRDTF----IKRSLIIRSIRKFLDDRGFLEVETPVLSPVAGGAAARPFITHHNALDI 225

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A + + + L+  GFD+ +++   FR+E       P EF  +++  ++ +  D+
Sbjct: 226 DLY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIYQAYADYKDM 283

Query: 250 LNTMENVLRGVFEE 263
           +N  E ++  V +E
Sbjct: 284 MNLTEELITTVAKE 297



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFP 491


>gi|315222919|ref|ZP_07864798.1| asparaginyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315187869|gb|EFU21605.1| asparaginyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 440

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 111/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-----------FEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA   +             F I K +
Sbjct: 7   VGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFLEKFGEEEGLNKFNIIKHL 66

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 67  NQETAVLVKGIVKEDERSKFG-------YELDVTDIEIVGESNDYPIT---PKEHGTDFL 116

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 117 MDHRHLWLRSRKQMAIMQIRNAIIYASYEFFDRNGFIKFDSPILSGNAAEDSTELF---- 172

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E  
Sbjct: 173 --ETDYFGTPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYP 230

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           FV  D+ LN  E     +++GV +   +               V+  F RI YD+ I
Sbjct: 231 FVTHDESLNLQEAYVKALIQGVLDRAPHALEVLERDIELLKKYVAEPFKRISYDEVI 287


>gi|282890093|ref|ZP_06298625.1| hypothetical protein pah_c012o020 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500021|gb|EFB42308.1| hypothetical protein pah_c012o020 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 465

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 113/266 (42%), Gaps = 32/266 (12%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWV-L 71
           S VGS V + GWV  VR      F++I D   ++  QVVANPD   +E      S  V +
Sbjct: 15  SPVGSDVTIKGWVRTVRNQKTFTFIEINDGSTLSNFQVVANPDLPNYERTMQELSTGVSV 74

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G V+    +          +EL A++++I+   +    P+  +R    S  F     
Sbjct: 75  AIQGTVVESPGKN-------QSLELVAKEVKIIGPCDPETYPLQKKRH---SYEFLRTIA 124

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGA-RDFLVPS---- 184
            LR  T     V R R   S    +    + F+   TPI+T+S  EGA + F V +    
Sbjct: 125 HLRPRTNTLGAVARIRNALSFATHLFFQKKGFLYIHTPIITSSDCEGAGKMFRVSTLDPD 184

Query: 185 ---RVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPG 232
              R  +G       F+  P       QL   + AS     +   P FR E+  + R   
Sbjct: 185 ALPRTKEGKVDYSKDFFEKPTYLTVSGQLEGEIYASALSDIYTFGPTFRAENSNTSRHLA 244

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLR 258
           EF+ ++ EM+F + +D ++  E  L+
Sbjct: 245 EFWMIEPEMAFADINDDMDCAEEYLK 270


>gi|254520542|ref|ZP_05132598.1| lysyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226914291|gb|EEH99492.1| lysyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 501

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 23/277 (8%)

Query: 5   RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH   D+     +  G+ V ++G +   R  G ++F D++D  G  Q+    D    E 
Sbjct: 44  RTHMSEDVKKDFENLEGTIVTVAGRIMSKRGQGKVVFSDVQDRDGKIQLFIKIDEVGEEA 103

Query: 62  AKSVRS----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            KS ++    +WV+    +  ++          TG++ +  +  E++  + + PLP    
Sbjct: 104 LKSYKTYDLGDWVVATGEVFKTK----------TGEVSVKVKNFELICKSLK-PLPEKWH 152

Query: 118 REYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
                 +R++ R +D+  +  +  N +KR  I+  +R  +    FIE  TP+L   +   
Sbjct: 153 GLKDPDLRYRQREVDMISNPEVKTNFMKRATILKGVREFLDNRGFIEVETPMLAPIAGGA 212

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+          Y L  AP+ Y +  + +G ++ + +   FR+E   S R   EF 
Sbjct: 213 SARPFITHHNTLDIDMY-LRIAPELYLKRCIVAGLEKVYDMGRTFRNEG-MSVRHNPEFT 270

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN 272
            +++  +F + +D++   EN++  V E+  NG T  N
Sbjct: 271 MIELYEAFSDYNDMMEIAENMIASVCEKV-NGTTKVN 306



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M L  + ++R+V +FP
Sbjct: 460 ALETGMPPTGGLGIGIDRVIMFLTDSASIRDVIMFP 495


>gi|110803200|ref|YP_699721.1| lysyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|123047148|sp|Q0SQ86|SYK_CLOPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|110683701|gb|ABG87071.1| lysine--tRNA ligase [Clostridium perfringens SM101]
          Length = 501

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 26/292 (8%)

Query: 5   RTHSCGDLGVSD-----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           RTHS  D  V D      G  V+++G +   R  G ++F D+ D  G  Q+    D+   
Sbjct: 44  RTHSSAD--VKDNFEELEGKEVKVAGRLMSKRGQGKVVFADLADLPGKIQLFIKIDNVGE 101

Query: 60  EIAKSVRS----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           E  K  ++    +WV     +  ++  E    +I     EL  + ++        PLP  
Sbjct: 102 EALKEFKTFDLGDWVAATGEVFKTKMGEV---SIKVTSFELICKSLK--------PLPEK 150

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R +D+  +   K+  +KR++I+ ++R  +    F+E  TPIL+  + 
Sbjct: 151 WHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAG 210

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+ +GF++ +++   FR+E   S R   E
Sbjct: 211 GAAARPFITHHNALDIDMY-LRIATELYLKRLIVAGFEKVYEMGKNFRNEGV-SVRHNPE 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           F  +++  ++ + +D++  MEN++  V E+ +    V+     I +    RR
Sbjct: 269 FTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWRR 320



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M L  + ++R+V LFP
Sbjct: 460 ALETGMPPTGGLGIGIDRMIMFLTDSSSIRDVILFP 495


>gi|16081630|ref|NP_393995.1| asparaginyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|20139925|sp|Q9HKS7|SYN_THEAC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|10639687|emb|CAC11659.1| probable asparaginyl--tRNA synthetase [Thermoplasma acidophilum]
          Length = 429

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 113/256 (44%), Gaps = 19/256 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VGS V + GWV+R+R  GG+ F+ +RD  GI Q  A  +    ++  ++ S   L I+  
Sbjct: 13  VGSKVSIRGWVYRIRSSGGVTFVVVRDSSGIIQCTARKNELPEDVYDTISS---LGIESS 69

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V        +    +G  E++     +    +  P+     ++  E      R L LR  
Sbjct: 70  VEFHGTLKEDRRSPSG-YEIAVDSFRVYQKNDVFPI----TKDQGEEFLLDNRHLWLRSR 124

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP- 195
                +  R+ I  S         + +  TP + +++ EG       S + +  F+  P 
Sbjct: 125 EFTSVLKIRSTIFRSFADFFYENGYYQVQTPFMVSTAVEGG------STLFKVDFFGEPI 178

Query: 196 ---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
              Q+ Q Y + ++ S  ++ F IAP FR E  R+ R   E++  + E+++++ +++++ 
Sbjct: 179 YLNQSAQFYLETMIYS-LEKVFTIAPSFRAEKSRTRRHLTEYWHAEAEVAWIDNNEMMDI 237

Query: 253 MENVLRGVFEEFSNGN 268
            E ++  +    +  N
Sbjct: 238 EERMIYYIVSRVTEDN 253


>gi|94968314|ref|YP_590362.1| lysyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|94550364|gb|ABF40288.1| lysyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 508

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 13/206 (6%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRII 149
           TG++ +  ++I  L+  + LPLP          +R++ R++D+  D  + +  +KR RI+
Sbjct: 122 TGELSIHVEEITFLA-KDLLPLPEKWHGLTDVELRYRRRYVDMNMDPDVREVFIKRARIL 180

Query: 150 NSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            +MR       F+E  TP+L +      AR F           Y L  AP+ Y + L+  
Sbjct: 181 QTMRSFFDQRGFVEVETPMLQSQYGGAAARPFTTHHNTLDMDLY-LRIAPELYLKRLVVG 239

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           G DR ++I   FR+E   +   P EF  L+   ++ +  D++   E + R +  E + G 
Sbjct: 240 GIDRVYEINRNFRNEGISTRHNP-EFTMLEFYWAYADYFDLMTLTEELFRQLATEVTGGT 298

Query: 269 TVS--------NNFLRICYDDAIRRY 286
           TV         +   R+   DAI +Y
Sbjct: 299 TVQYGDHTLDFSKMERLTMRDAILKY 324



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/38 (57%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA   GMPP GG+  GIDR VMLL  +K++R+V LFP+
Sbjct: 460 RALSYGMPPTGGMGIGIDRTVMLLTNSKSIRDVILFPL 497


>gi|161611325|ref|NP_967990.2| asparaginyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
          Length = 463

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 130/305 (42%), Gaps = 53/305 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V LSGWV ++R      F+++ D   +   QVV + + A F ++A    S  VL    +V
Sbjct: 21  VYLSGWVRKIRDQKNFGFIELNDGTFFKGVQVVFDNNLANFADVAALSISSSVLVTGKVV 80

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            S+ A         GQ  E+ A KIEI+  A+ L  P+  +R   E +R +   L  R +
Sbjct: 81  KSQGA---------GQSFEVMASKIEIVQKAD-LEYPLQNKRHSMEFLR-EIAHLRPRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL--------VPSRVNQ 188
           T       R+ +  ++      +NF+  +TPI+T S  EGA +           P R   
Sbjct: 130 TFSAVFRVRSVLAYAIHKFFNEQNFVYVNTPIITGSDAEGAGEMFRVTTLKLDKPPRKED 189

Query: 189 GSFYALPQAPQQYKQLLMA---------SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           GS  A      +   L ++         + F   +   P FR E+  + R   EF+ ++ 
Sbjct: 190 GSIDASQDFFGKETNLTVSGQLNGETFCAAFRNIYTFGPTFRAENSNTSRHAAEFWMIEP 249

Query: 240 EMSFVEQDDILNTMEN----VLRGVFE------EFSN-----------GNTVSNNFLRIC 278
           E++F +    +   E+    ++R V E      EF N            N ++NNF R+ 
Sbjct: 250 EIAFADLTANMELAEDMIKYIIRYVMEQCPEEMEFFNQFVEKGLFDKLNNVLNNNFGRVT 309

Query: 279 YDDAI 283
           Y +AI
Sbjct: 310 YTEAI 314


>gi|145602945|ref|XP_362236.2| hypothetical protein MGG_13783 [Magnaporthe oryzae 70-15]
 gi|145011291|gb|EDJ95947.1| hypothetical protein MGG_13783 [Magnaporthe oryzae 70-15]
          Length = 932

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 15/251 (5%)

Query: 17  VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VGS +     +H  R     + FL +RD     Q V        + A+ +  E ++ I G
Sbjct: 178 VGSEITFRARIHHQRDISKALDFLLLRDQTHSIQGVLQGPPEMVKWAQRLHPESIVQITG 237

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--RFKYRFLDL 133
            +     E + +    G +E+    I +++ A+ L    F   + PES+  R   R +DL
Sbjct: 238 HLQC-PREPVRSATHQG-LEVLIDTIHLVAPAKNL---SFNNYQPPESLHPRLTNRVVDL 292

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFLVPSRVNQ-GSF 191
           R          R  +  + R  +  ++F+E  TP I+  ++  GA  F    +VN  G  
Sbjct: 293 RHPANQALFRVRAAVTRTFRWTLDQQDFVEIQTPKIMAGATESGAEVF----KVNYFGRS 348

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDIL 250
             L Q+PQ  KQ+ +++ F R +++ P FR E+  + R   E+  LD+EM   +   +I+
Sbjct: 349 AYLAQSPQLSKQMAISADFKRVYEVGPVFRAENSNTHRHLTEYTGLDIEMCIDQSHHEII 408

Query: 251 NTMENVLRGVF 261
             ++ VL+ +F
Sbjct: 409 RMVDRVLKNIF 419



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI +GG R H  + + Q+ ++ GIS + +E        AF+ G PPHGG   
Sbjct: 519 FDIFVRGQEICTGGQRIHKYDELRQSMTDSGISGDGMEEYLA----AFESGAPPHGGAGL 574

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++RI+  +L   +VR  + F
Sbjct: 575 GLERIITFMLQLGDVRNAAPF 595


>gi|68249757|ref|YP_248869.1| lysyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81335815|sp|Q4QL88|SYK_HAEI8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|68057956|gb|AAX88209.1| lysyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 502

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 21/282 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F+ I+D     Q+    D+    + K     W L   G ++  
Sbjct: 64  VQVAGRIMTRRAMGKATFITIQDMSSKIQLYVARDNLPEGVYKDDVGTWDL---GDIVGV 120

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     T ++ +   ++++L+ A   PLP        + +R++ R+LDL   +   
Sbjct: 121 KGTLFKTK--TDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISNEESR 177

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  + R++++  +R   I++ F+E  TP+L    P GA  R F+          Y L  A
Sbjct: 178 RTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVDMY-LRIA 235

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+++  E +L
Sbjct: 236 PELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNTEELL 294

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
           R +  +      V            F RI   DA  +YG DK
Sbjct: 295 RKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATVKYGADK 336



 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|313608032|gb|EFR84120.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 365

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 21/206 (10%)

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRC 154
           E++   +E++S + + P+     +E+       +R L LR +  H  +  R  II +   
Sbjct: 21  EMAVSGVEVISESHDYPI---TPKEHGTEFLMDHRHLWLRSNRQHAIMKIRNEIIRASYE 77

Query: 155 RMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
               E F++   PILT S+PEG  +        + +F  L Q+ Q Y +   A  F + F
Sbjct: 78  FFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF--LSQSGQLYMEA-AAMAFGKVF 134

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN----VLRGVFE-------- 262
              P FR E  ++ R   EF+ ++ EM+F + +D L   EN    +++ V +        
Sbjct: 135 SFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQVQENYVAFLVKAVLDNCRLELDR 194

Query: 263 ---EFSNGNTVSNNFLRICYDDAIRR 285
              + S+   +   F RI Y +AI R
Sbjct: 195 LGRDVSHLEKMVAPFPRITYTEAIER 220


>gi|311280819|ref|YP_003943050.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308750014|gb|ADO49766.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 506

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+ A  D     +      +W L   G +++ 
Sbjct: 69  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYAARDDLPEGVYNDRFKKWDL---GDIIAA 125

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 126 RGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLIANDESR 182

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  K R++I+  MR  M+   F+E  TP++    P GA  R F+          Y L  A
Sbjct: 183 NTFKIRSQILAGMRKFMVGRGFMEVETPMMQVI-PGGASARPFITHHNALDMDMY-LRIA 240

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 241 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 299

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295
           R + ++      V            F+++   +AI++Y   T+  DL N
Sbjct: 300 RTLAQDVLGKTEVPYGEHTFDFGKPFVKLTMREAIKKYRPETNMADLDN 348



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 465 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 500


>gi|187932242|ref|YP_001892227.1| lysyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|187713151|gb|ACD31448.1| lysyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 576

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV       PD   
Sbjct: 122 RYADKTKQELEELDNKQQYNLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 180

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +E  K+      LC  G ++  +      N  TG++ + A   EIL+ A   PLP     
Sbjct: 181 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 231

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + +R++ R++DL  +   + + K R++++N +R      +F+E  TP++        
Sbjct: 232 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVNFIRNYFDRLDFMEVETPMMHVLQGGAA 291

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F           Y L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  
Sbjct: 292 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTM 349

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287
           L+  +++ + +D+++  E++L  + +E      +            + RI   D+I +Y 
Sbjct: 350 LEFYIAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 409

Query: 288 TD--KPDL 293
            D  K DL
Sbjct: 410 DDITKEDL 417



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VM L  ++++R+V LFP
Sbjct: 535 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 571


>gi|325192924|emb|CCA27311.1| aspartyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 529

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 112/268 (41%), Gaps = 36/268 (13%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS----ACFE 60
           + H+ G L +++ GS V + G++  VR    I FL +R      Q +            +
Sbjct: 69  KYHNIGQLHLAEKGSQVWVRGYLQNVRSKSKIAFLLLRQSMASIQAILTESDQVPRTMIK 128

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGERE 119
            A  +  E V  ++ LV   +A+    +     IEL   ++ ++S A  ELP  V  +  
Sbjct: 129 FASGIPKESV--VEMLVTITAAKQPIVSTSQKDIELQVHQLFLISKAMPELPFQV-EDAA 185

Query: 120 YPESI---------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE----- 159
            P+++               R   R LDLR  T     + R   I +  CR+  E     
Sbjct: 186 RPDALVKAEGSTFADVGLDTRLNTRVLDLR--TPANQAIMR---IQAGVCRLFREFLDDK 240

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA-SGFDRYFQIAP 218
            F+E  TP L   + E           +Q +   L Q+PQ YKQ+  A  G +R ++I P
Sbjct: 241 GFVEIHTPKLIGGASESGASVFKLKYFDQEA--CLAQSPQTYKQMACACGGLERVYEIGP 298

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            FR E+  + R   EF  LD+EM   E 
Sbjct: 299 VFRAENSNTHRHMCEFVGLDLEMVIQEH 326



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD++  G EI SG  R H ++++      + + KE ++        AF+ G  PHGG   
Sbjct: 444 YDIMIRGEEIVSGAQRVHDAKLLEDRLDALNVPKESLKTYID----AFRLGALPHGGGGI 499

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 500 GLERVVMLYLGLGNIRKASMFP 521


>gi|297588654|ref|ZP_06947297.1| lysine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297574027|gb|EFH92748.1| lysine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 636

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 136/282 (48%), Gaps = 22/282 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+++G +   R HG + F+D++D  G  Q+    +    E    V++  +  I G+ 
Sbjct: 49  GKEVKIAGRIMSKRGHGKVNFMDLQDSVGRIQLFNKVNELGEENYAKVKNMDIGDIVGV- 107

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136
                E       +G++ +  + + +LS + + LP    G ++ P+ +R++ R++DL  +
Sbjct: 108 -----EGTIFKTHSGEVSIRTKSVVLLSKSLQILPEKWHGLKD-PD-LRYRQRYVDLIMN 160

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
             +    VKR+RII+++R  +    F+E  TPIL T +    AR F+          Y L
Sbjct: 161 PEIKDTFVKRSRIISAIREFLDTRGFLEVDTPILNTIAGGANARPFITHHNTLDIDMY-L 219

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + Y + L+  GFD+ +++   FR+E       P E+  +++  ++ + +D+++  E
Sbjct: 220 RIANELYLKRLIVGGFDKVYEMGRMFRNEGMDHTHNP-EYTAIELYQAYADYNDMMDITE 278

Query: 255 NVLRGVFEEFSN------GNT---VSNNFLRICYDDAIRRYG 287
            ++  V E+ +       G T    +  + RI   DAI+ Y 
Sbjct: 279 QLVAFVCEKVNGSMKAQFGETEIDFTPPWKRITMVDAIKEYA 320



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR++M+L   +++R++ LFP
Sbjct: 446 ALEVGLPPTGGLGIGVDRLIMMLTNNESIRDIMLFP 481


>gi|223994379|ref|XP_002286873.1| aspartate-trna ligase [Thalassiosira pseudonana CCMP1335]
 gi|220978188|gb|EED96514.1| aspartate-trna ligase [Thalassiosira pseudonana CCMP1335]
          Length = 475

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 101/230 (43%), Gaps = 29/230 (12%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R  +R++DLR          ++ +    R  ++ +NFIE  TP + + + EG  D  
Sbjct: 149 QETRLDHRWIDLRTPANQSIFRIQSMVCTLFREYLLKQNFIEIHTPKILSGASEGGADVF 208

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMA-SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  G    L  +PQ +KQ+  A  GF+R F+I P FR E+  + R   EF  LD+E
Sbjct: 209 TLDYF--GKPACLSMSPQLHKQMAAACGGFERVFEIGPVFRAENSNTRRHLCEFTGLDLE 266

Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSN--GNTVS--------------NNFLRICYDDA- 282
           M+ +E  D++L+ +  +   +F+      G  +                  L+I Y    
Sbjct: 267 MAIMEHYDEVLDVLGELFVYIFDGLKEKCGQELERIKEQHGFEDLQYLRKTLKIDYATGC 326

Query: 283 --IRRYGTDKPDL-----RNPIIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
             +R  G D+ DL      N   + ++ +   +++F +  K  LSV P Y
Sbjct: 327 RLLREAGVDQDDLDDLSTENEKKLGDIVKEKYNTDFYIMDKYPLSVRPFY 376



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H + ++ +     GI  E +         AF+ G  PHGG   
Sbjct: 390 YDIFIRGQEILSGAQRIHETGLLEERAKAWGIDLETI----SAYLDAFRNGALPHGGGGI 445

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 446 GMERVVMLYLGLPNIRKSSMFP 467


>gi|297816700|ref|XP_002876233.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322071|gb|EFH52492.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 18/259 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           GS V + G VH  R    I+F+ +R      Q VA            ++    L  + +V
Sbjct: 108 GSEVLIRGRVHTYRVQPSIVFVILRKSGSTVQCVAKQSEETNVSVNMIKYLEKLSCESIV 167

Query: 78  MSRSAETINANIITG---QIELSAQKIEILSVA-EELPLPV-------FGER--EYPESI 124
                  +  + + G   Q+E+  +K+  ++ A   LP  V        G R     +  
Sbjct: 168 DVIGVVVLPKDPVKGTTQQVEIQVRKLYCVNKALTRLPFNVEAAARSETGRRAVRVNQDT 227

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  +R +DLR       +  +++++N     +++++F+   TP L A S EG        
Sbjct: 228 RLNHRVIDLRTPANQAIVALKSQLVNFFSENLLSKDFVNIFTPKLLAGSSEGGSAVF--- 284

Query: 185 RVN-QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           R+  QG    L Q+PQ +KQ+ +     R F+I P FR E   S R   EF  LD+EM  
Sbjct: 285 RLEYQGQPACLAQSPQLHKQMAICGDLRRVFEIGPVFRAEKSFSHRHLCEFVGLDVEMEI 344

Query: 244 VEQ-DDILNTMENVLRGVF 261
            +   +I++ ++ +   +F
Sbjct: 345 DKHYSEIMDLVDELFVAIF 363



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H  E++ Q     GI  + +         +F+ G PPHGG  A
Sbjct: 465 FDVFIRGEEIISGAQRIHTPELLEQRAREHGIDVKTISTYID----SFRYGAPPHGGFGA 520

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML  G  N+R+ SLFP
Sbjct: 521 GLERVVMLFCGLNNIRKTSLFP 542


>gi|298492161|ref|YP_003722338.1| asparaginyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298234079|gb|ADI65215.1| asparaginyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 463

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 125/306 (40%), Gaps = 55/306 (17%)

Query: 23  LSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFE-IAKSVRSEWVLCIDGLVMS 79
           + GWV   R   G  FL++ D    G  Q+V N D   +E I K + +   + + G++++
Sbjct: 21  IQGWVRTKRELKGFAFLEVNDGSSLGNLQIVINQDLPNYEGILKQINTGASVEVSGVLVA 80

Query: 80  RSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
              +        GQ IEL A  ++I   A+    P+  +R    S  F      LR  T 
Sbjct: 81  SQGK--------GQRIELKADVLKIYGDADPETYPLQKKRH---SFEFLRTIAHLRSRTN 129

Query: 139 HKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVN 187
               V R R     ++       +F+   TPI+TAS  EGA +           +P   N
Sbjct: 130 SFGAVFRVRNACATAIHQFFQERDFLWVHTPIITASDCEGAGELFSVTNLDFKKIPRTGN 189

Query: 188 QG-----SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           Q       F++ P       Q +  +MA  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 190 QDIDYSQDFFSKPAYLTVSGQLEAEIMAMAFTNVYTFGPTFRAENSNTSRHLAEFWMVEP 249

Query: 240 EMSFVEQDDILNTMENVLRGVFE----------EFSNGN-----------TVSNNFLRIC 278
           EM+F + +  ++  E  L+ +F+          EF N              +SN F R+ 
Sbjct: 250 EMAFCDLEGDMDLAEEFLKYIFKYVLETCTQDMEFFNERIDRTVLETADYIISNQFERLS 309

Query: 279 YDDAIR 284
           Y DA++
Sbjct: 310 YTDAVK 315


>gi|149919126|ref|ZP_01907610.1| asparaginyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149820056|gb|EDM79477.1| asparaginyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 467

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 28/261 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           +R+ GW   VR    + F+ + D   +G  QVV  P+   +E    + +   L ++G   
Sbjct: 24  LRVKGWARTVRSGKKVTFISLNDGSSFGSLQVVVPPEVDDYEAITHLTTGSALSVEG--- 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               E I +     ++EL A K+EI+  A+    P+  +R   E +R +   L +R +T 
Sbjct: 81  ----ELIESPAKGQRVELKATKVEIVGKADP-SYPLQKKRHGFEFLR-EQAHLRVRTNTF 134

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV--------PSRVNQGS 190
                 R+ +  S+        F    TPI+TAS  EGA +           P R ++G+
Sbjct: 135 GAVFRVRSALAQSVHRFFGERGFYYIHTPIITASDTEGAGEMFRVTTLPVGDPPRDDEGA 194

Query: 191 ------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 F+A P       QL     A G    +   P FR E+  + R   EF+ ++ EM
Sbjct: 195 VDDKQDFFAKPTFLTVSGQLNGETFALGLSDIYTFGPTFRAENSNTSRHASEFWMIEPEM 254

Query: 242 SFVEQDDILNTMENVLRGVFE 262
           ++ + DD     E+ ++ + +
Sbjct: 255 AWHDLDDDCQLAEDFVKAMLK 275



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G  PH G   G +R+VM   G +N+R+V  FP +   C+ 
Sbjct: 428 GTAPHAGFGLGFERLVMYATGMENIRDVIPFPRTPRTCEF 467


>gi|323972625|gb|EGB67828.1| hypothetical protein ERHG_01368 [Escherichia coli TA007]
          Length = 98

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
          RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A 
Sbjct: 2  RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64 SVRSEWVLCIDGLVMSRSAETINA 87
           +R+E+ + + G V +R  + + A
Sbjct: 62 ELRNEFCIQVTGTVRARDEKILTA 85


>gi|269986979|gb|EEZ93255.1| lysyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum ARMAN-4]
          Length = 477

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 25/250 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74
           G   +++G +   R HG I F+D++D  G  QV     + D    + A+ + +  ++ + 
Sbjct: 46  GKDTKVAGRIIAKRDHGKIKFIDLQDEEGSIQVYFSEKHADKKTVKTAEELDTGDIIGVT 105

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGEREYPESIRFKYRFLD 132
           G ++            T +I + A+ I ILS A  LP+P   +G  +  +  R++ R+LD
Sbjct: 106 GTIIKTK---------TNEISIDAKDITILSKA-LLPMPSRWYGLEDTEK--RYRKRYLD 153

Query: 133 --LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQ 188
             + R++L K I K   I++ +R  M    +IE   PIL    P G  A+ F+       
Sbjct: 154 FIINRESLEK-IKKGNIILSKIREIMEKNKYIEVIVPILQP-IPGGANAKPFITHYNSLD 211

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FY L  A ++Y + ++  GF+R F I+  FR+E   +   P EF  ++   ++ +   
Sbjct: 212 RDFY-LKIASERYLKRMLVGGFERVFDISKNFRNEGVDTRHNP-EFMMMEAYQAYGDLSS 269

Query: 249 ILNTMENVLR 258
           +L   E +++
Sbjct: 270 MLQLTEEIVK 279



 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           GMPP GG+  GIDR+ M+   +K+++EV  FP  + F
Sbjct: 438 GMPPAGGVGIGIDRLQMIGTDSKSIKEVIPFPQLRTF 474


>gi|331089813|ref|ZP_08338706.1| hypothetical protein HMPREF1025_02289 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330403510|gb|EGG83068.1| hypothetical protein HMPREF1025_02289 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 642

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 131/286 (45%), Gaps = 30/286 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F +++D  G  Q     DS   E  K  +   V    G V
Sbjct: 58  GKQVSIAGRMMSKRVMGKASFCNVQDLKGNIQSYVARDSIGEENYKEFKKLDV----GDV 113

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    E       TG+I + A  + +LS + ++ LP          +R++ R++DL  + 
Sbjct: 114 IGIEGEVFKTK--TGEISIHASHVTLLSKSLQI-LPEKFHGLTNTDMRYRQRYVDLIMNP 170

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
             K+  +KR++II+++R  +  E F+E  TP+L A++   A      +R  +  F AL +
Sbjct: 171 EAKDTFIKRSKIISAIRRYLDGEGFMEVETPMLVANAGGAA------ARPFETHFNALNE 224

Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                 + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++
Sbjct: 225 DLKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMM 283

Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           +  EN+ R V +E      +  N         F RI   DA+++Y 
Sbjct: 284 DLTENLYRHVAQEVLGTTKIVYNGVEMDLGKPFERITMVDAVKKYA 329



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+ MLL  +  +R+V LFP
Sbjct: 455 ALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFP 490


>gi|13540308|gb|AAK29404.1|AF337055_1 lysyl tRNA synthetase [Methanosarcina barkeri]
          Length = 516

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 129/286 (45%), Gaps = 29/286 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKSVRSEWVLCI 73
           G  VR +G ++ +R  G +IF D+ D  G  Q+       PD         V S  ++ +
Sbjct: 76  GLTVRTAGRLYNIRRLGKMIFADLGDQGGRIQITLRKGNLPDEDFKTFKTLVDSGDIVGV 135

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLD 132
            G +              G+  +S  +  +LS +   LP    G ++     R++ R+LD
Sbjct: 136 QGTLFRTKR---------GENSISVSEFSLLSKSLCALPEKFHGLKDV--ETRYRKRYLD 184

Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGS 190
           L  +   + I V R+++I+ +R  +    F+E  TPIL        AR F        G 
Sbjct: 185 LIVNADKREIFVMRSKLISEIRRYLSDREFLEFETPILHNVYGGANARPFTTFHNC-LGQ 243

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
             +L  AP+ Y + L+  G+++ F+I   FR+ED  +   P EF  +++  ++ + +D++
Sbjct: 244 NSSLRIAPELYLKRLVVGGYEKVFEITKNFRNEDIDTTHNP-EFTTIEVYEAYRDYNDMM 302

Query: 251 NTMENV-------LRGVFEEFSNGNT--VSNNFLRICYDDAIRRYG 287
           +  E +       L G +E     NT  +S  + RI  +DA++ Y 
Sbjct: 303 DLTEGLISELMFKLTGSYEVKIGENTLNLSTPWKRISMEDALKEYA 348



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP GG+  GIDR+ M+L+G  +++EV LFP
Sbjct: 475 ALGYGMPPTGGMGLGIDRLTMILVGLDSIKEVILFP 510


>gi|167390996|ref|XP_001739593.1| aspartyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165896669|gb|EDR24016.1| aspartyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar
           SAW760]
          Length = 544

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 136/341 (39%), Gaps = 84/341 (24%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSEWVLCIDGL 76
           V +   V  VR  G ++FL +R   Y    +V   ++   E  +    + +E +  I G+
Sbjct: 61  VTVRARVQAVRGKGNMVFLFLRKGIYTCQALVMKSETISKEFVQFCQKISAESICDITGI 120

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFKYRFLDLRR 135
           V  ++ E          +E+    IE++S+AE  PLP+   +  +P S+ FK +  D+ +
Sbjct: 121 V--KAVEKPIEKATQQDVEIHVTSIEVISLAE-YPLPMQIEDLTFPSSV-FKKQEEDIAK 176

Query: 136 ----------DTLHKNIVKR-------------------------TRIINSM-------- 152
                     D   K++ KR                         TR+ N M        
Sbjct: 177 VDEKIAKFLKDNEGKDLTKRPLKDEYAKLLKEKASAQKYVKVSQDTRLDNRMLDLRTVTN 236

Query: 153 --------------RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                         R  + ++ F+E  TP L   S EG  +       ++ ++ A  Q+P
Sbjct: 237 IAIFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSSEGGSNIFEVKYFDRKAYLA--QSP 294

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257
           Q YKQ+ +   F + F++ P FR E+  + R   EF  LD+EM  VE   + ++ ME + 
Sbjct: 295 QLYKQMAIMGDFRKVFEVGPVFRAENSNTRRHLTEFEGLDIEMEIVENYHECIDVMEKLF 354

Query: 258 RGVFEEFSN---------------GNTVSNNFLRICYDDAI 283
             +F+E                   + V   FLR+ Y +AI
Sbjct: 355 TFIFDEIPKRFPDELKVIRKQYPFEDLVYRPFLRLTYKEAI 395



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++     G+    +++       +F+ G  PH G   
Sbjct: 459 YDVFVRGQEITSGAQRIHDPEFLMKRCIEKGVDPATLKDYI----ESFRFGSWPHAGCGI 514

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RI ML LG  N+R+V+LFP
Sbjct: 515 GLERITMLYLGIPNIRKVTLFP 536


>gi|160871773|ref|ZP_02061905.1| lysyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120572|gb|EDP45910.1| lysyl-tRNA synthetase [Rickettsiella grylli]
          Length = 502

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 115/242 (47%), Gaps = 13/242 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR++G +   R  G  +F DI+D  G  Q+    D+   E  + ++   +  I G+V   
Sbjct: 65  VRVAGRIMLKRDMGKSLFFDIQDMSGKMQIYVKQDTVGVEHYEMIKRLDLGDIVGIV--- 121

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138
               +     T Q+ + A+K+++LS A   LP    G  E  +  R+++R+LDL   +  
Sbjct: 122 ---GVLFRTKTNQLSVKAEKVDLLSKALRPLPDKFHGLSESDKEQRYRHRYLDLMTNEKT 178

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQ 196
            K    R+++I  +R  +    F+E  TP++    P G  AR F+          + L  
Sbjct: 179 RKTFQIRSQLIQEIRQFLNRRGFLEVETPMMHV-LPGGALARPFITHHNALNMPLF-LRV 236

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + + L+  G ++ F+I   FR+E   S R   EF  L+   ++ +  D+++  E +
Sbjct: 237 APELHLKRLVVGGMEKVFEINRSFRNEG-LSTRHNPEFTMLEFYQAYSDYHDLMDLTEQL 295

Query: 257 LR 258
           +R
Sbjct: 296 IR 297



 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 25/38 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A + G+PP  G   GIDR+ ML   + ++R+V LFP+
Sbjct: 459 QALEYGLPPTAGEGMGIDRLTMLFTDSVSIRDVILFPL 496


>gi|317500712|ref|ZP_07958930.1| lysyl-tRNA synthetase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|316897906|gb|EFV19959.1| lysyl-tRNA synthetase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 642

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 131/286 (45%), Gaps = 30/286 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F +++D  G  Q     DS   E  K  +   V    G V
Sbjct: 58  GKQVSIAGRMMSKRVMGKASFCNVQDLKGNIQSYVARDSIGEENYKEFKKLDV----GDV 113

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    E       TG+I + A  + +LS + ++ LP          +R++ R++DL  + 
Sbjct: 114 IGIEGEVFKTK--TGEISIHASHVTLLSKSLQI-LPEKFHGLTNTDMRYRQRYVDLIMNP 170

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
             K+  +KR++II+++R  +  E F+E  TP+L A++   A      +R  +  F AL +
Sbjct: 171 EAKDTFIKRSKIISAIRRYLDGEGFMEVETPMLVANAGGAA------ARPFETHFNALNE 224

Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                 + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++
Sbjct: 225 DLKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMM 283

Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           +  EN+ R V +E      +  N         F RI   DA+++Y 
Sbjct: 284 DLTENLYRHVAQEVLGTTKIVYNGVEMDLGKPFERITMVDAVKKYA 329



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+ MLL  +  +R+V LFP
Sbjct: 455 ALEIGMPPTGGIGFGIDRMCMLLTNSAAIRDVLLFP 490


>gi|220930923|ref|YP_002507831.1| Lysyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992233|gb|ACL68836.1| Lysyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 491

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 15/258 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GL 76
           G  V LSG +   R HG   F DI+D  G  Q+    D     I      E    +D G 
Sbjct: 53  GKKVSLSGRIMAKRTHGKASFADIQDVTGKIQLYVKVD-----IVGEKEYELFTGLDIGD 107

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRR 135
           ++  + E        GQI +      +L+ +   LP    G R+  + +R++ R+LDL  
Sbjct: 108 IIGVTGEVFKTR--RGQISVKVHSFRLLTKSLRPLPEKWHGLRD--KELRYRQRYLDLIV 163

Query: 136 D-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           +  + K  + R++II  +R  +  + F+E  TP++   +    AR F+          Y 
Sbjct: 164 NPEVRKTFITRSKIIREIRKYLEDKGFLEVETPMMHPIAGGANARPFITHHNALDIDLY- 222

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F+I   FR+E       P EF  L++  +  +  D+++  
Sbjct: 223 LRIAPELYLKRLIVGGFERVFEINRNFRNEGMSYKHNP-EFTMLELYQAQADYHDMMDLT 281

Query: 254 ENVLRGVFEEFSNGNTVS 271
           E+++  V ++      +S
Sbjct: 282 EDLIYNVAKKVLGTTKIS 299



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR++M+L  + ++R+V LFP
Sbjct: 449 RALEYGMPPTGGLGIGIDRLIMVLTDSPSIRDVILFP 485


>gi|283853281|ref|ZP_06370531.1| lysyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283571321|gb|EFC19331.1| lysyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 529

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 134/295 (45%), Gaps = 26/295 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            ++ V +  RL+G +  +R  G + F  I+D  G  QV A  D    E  ++ +   +  
Sbjct: 82  ALAAVPTVFRLAGRIVSLRSFGKVAFFTIQDASGRIQVFAERDKLGTEAYQTFKKFDIGD 141

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFL 131
           I G V  R   T      TG++ L A  + +L+ +   LP    G ++     R++ R++
Sbjct: 142 IVG-VSGRLFRTK-----TGELTLHADTVRLLTKSMRPLPEKFHGLKDV--ETRYRQRYV 193

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP-SRVN 187
           DL        I K RT I+  +R  +    F+E  TP++ A  P GA  + F+   + ++
Sbjct: 194 DLIVTPKAVEIFKARTTIVRELRAFLDTAGFMEVETPMMQAI-PGGATAKPFVTHHNALD 252

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
            G F  +  AP+ Y + L+  GF++ +++   FR+E   +   P EF   +   ++    
Sbjct: 253 MGLFLRI--APELYLKRLLVGGFEKVYEVGRNFRNEGVSTRHNP-EFTMCEFYWAYARYT 309

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPDL 293
           D+++  E +   +    + G+ V+           + R+ + D++ + G   PD+
Sbjct: 310 DLMDLTERLFSHLARAVTGGDVVTYQGQEINLGLGWTRLAFHDSLEKVGGISPDV 364



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL    ++REV LFP+
Sbjct: 483 RALEYGMPPAAGEGIGIDRLVMLLTDQASIREVILFPL 520


>gi|224064651|ref|XP_002197190.1| PREDICTED: lysyl-tRNA synthetase [Taeniopygia guttata]
          Length = 586

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 120/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           VR++G +H  R  GG +IF D+R      QV+AN      +   F +   +R   ++ ++
Sbjct: 122 VRVAGRIHAKRAAGGKLIFYDLRGEGVKLQVMANSSLYKSEEEYFRVNSKLRRGDIIGVE 181

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 182 G---------NPGKTRKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 230

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R +II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 231 ILNDYVRQKFITRAKIITYLRSFLDELGFLEVETPMMNVI-PGGAVAKPFITYHNELDMN 289

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 290 LY-MRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 347

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E +L G+ +  +    ++
Sbjct: 348 EITEKLLSGMVKHITGSYKIT 368



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 532 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 567


>gi|261867764|ref|YP_003255686.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413096|gb|ACX82467.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 502

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 122/281 (43%), Gaps = 19/281 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ I+D  G  Q+    ++    + K     W L   G ++  
Sbjct: 64  VTVAGRIMTRRAMGKATFITIQDMSGKIQLYVARNNLPEGVYKDDVGHWDL---GDIVGI 120

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     T ++ + A K+++L+ A   PLP        + +R++ R+LDL   +   
Sbjct: 121 KGSLFKTK--TDELTVKATKVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISNEESR 177

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  + R++++  +R   +++ F+E  TP+L        AR F+          Y L  AP
Sbjct: 178 RTFIIRSKVVAGIREYFLSKGFMEVETPMLQVIPGGAAARPFVTHHNALDVDMY-LRIAP 236

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+++  E +LR
Sbjct: 237 ELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNTEELLR 295

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
            +         V            F RI   DA  +YG +K
Sbjct: 296 KLAINILGTTIVKYGDLEFDFGKPFERITLHDATIKYGAEK 336



 Score = 40.4 bits (93), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ ML   A ++R+V LFP
Sbjct: 462 ALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|329117476|ref|ZP_08246193.1| asparagine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907881|gb|EGE54795.1| asparagine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 448

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 114/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  + +  WV      G + FL +RD     Q VA  P+          +A F+  K +
Sbjct: 15  VGQEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKFGEEEGAAKFDTIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G V                 EL    +E++  + + P+     +E+     
Sbjct: 75  SQETSVYVTGTVKEDERSKFG-------YELDVTDLEVIGESVDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II S         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQVRNAIIYSTYEFFDQNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  D+ L+  E     +++GV E   +               ++  F R+ YDDAI
Sbjct: 239 FLNHDESLDLQEAYVKALIQGVIERAPHALEILERDIDALKRYITEPFKRVSYDDAI 295



 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    E ++     + + K   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDDYEALVAKMDALEMDKS--EYEFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|118496782|ref|YP_897832.1| lysyl-tRNA synthetase [Francisella tularensis subsp. novicida U112]
 gi|194324537|ref|ZP_03058309.1| lysyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
 gi|118422688|gb|ABK89078.1| lysyl-tRNA synthetase [Francisella novicida U112]
 gi|194321372|gb|EDX18858.1| lysyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
          Length = 576

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV       PD   
Sbjct: 122 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 180

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +E  K+      LC  G ++  +      N  TG++ + A   EIL+ A   PLP     
Sbjct: 181 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 231

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++        
Sbjct: 232 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAA 291

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F           Y L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  
Sbjct: 292 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTM 349

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287
           L+  M++ + +D+++  E++L  + +E      +            + RI   D+I +Y 
Sbjct: 350 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 409

Query: 288 TD--KPDL 293
            D  K DL
Sbjct: 410 DDITKEDL 417



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VM L  ++++R+V LFP
Sbjct: 535 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 571


>gi|290476398|ref|YP_003469303.1| lysine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289175736|emb|CBJ82539.1| lysine tRNA synthetase, constitutive [Xenorhabdus bovienii SS-2004]
          Length = 504

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 115/246 (46%), Gaps = 12/246 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  QV  + D     I      +W L   G ++  
Sbjct: 67  VTVAGRMMTRRIMGKASFATLQDMGGRIQVYVSRDDLPEGIYNEQFKKWDL---GDILGA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
             +       TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 124 RGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQEMRYRQRYLDLISNDESR 180

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           K    R+RI+ ++R  M+ ++F+E  TP++ A  P GA  R F           Y L  A
Sbjct: 181 KTFQIRSRIMAALRNFMVKKDFMEVETPMMQAI-PGGASARPFTTHHNALDIDMY-LRIA 238

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E + 
Sbjct: 239 PELYLKRLVVGGFERVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYQDLIVLTEELF 297

Query: 258 RGVFEE 263
           R + +E
Sbjct: 298 RTLTQE 303



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 463 ALEHGLPPTAGLGIGIDRMVMLFTDSHTIRDVILFP 498


>gi|240143458|ref|ZP_04742059.1| lysine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257204491|gb|EEV02776.1| lysine--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 645

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 135/286 (47%), Gaps = 32/286 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F +I+D  G  QV    D+   EI K  R   +  I G+ 
Sbjct: 56  GKQVSIAGRMMFKRVMGKASFCNIQDLKGRIQVYVARDNIGEEIYKDFRKSDIGDIWGV- 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136
                +       TG+I + A+++ +LS + + LP    G  +    +R++ R++DL  +
Sbjct: 115 -----KGYAFRTKTGEISIHAEEMTLLSKSLQILPEKFHGLTD--TDMRYRQRYIDLIMN 167

Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              K + +KR++I+  +R  +   +F+E  TP+L +++   A      +R  +  + AL 
Sbjct: 168 QESKEVFIKRSKILKEIRNFLADRDFMEVETPMLVSNAGGAA------ARPFETHYNALN 221

Query: 196 Q------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + +
Sbjct: 222 EDVKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGM 280

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           +   E++ R + E+      +S N         F R+  +DAI++Y
Sbjct: 281 MELTESMFRYLAEKVCGSTKISYNGIEIDLGKPFTRMTMNDAIKKY 326



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 28/41 (68%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++ 
Sbjct: 453 ALEIGMPPTGGIGYGIDRLVMLLTDSAAIRDVLLFPTMKSL 493


>gi|219852705|ref|YP_002467137.1| lysyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219546964|gb|ACL17414.1| lysyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 511

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 140/314 (44%), Gaps = 27/314 (8%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
            D+G       V+++G ++ +R HG  +F D+ D  G  Q+    +    ++ +   S +
Sbjct: 46  ADIGHEKSEESVKIAGRIYTIRNHGKTVFADLGDEQGRIQLYIRKN----DVGEEQFSLF 101

Query: 70  VLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
              ID G ++  S       +  G+I L   ++ +L+ +   PLP           R++ 
Sbjct: 102 TEQIDRGDIIGVSGHLFRTKL--GEITLWVDQLTLLTKS-LCPLPEKFHGLKDTETRYRQ 158

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRV 186
           R++DL  +   +   + R+RII+ +R  +    F+E  TP L        AR F      
Sbjct: 159 RYVDLIMNEKARETFRVRSRIISLIRQFLGERGFLEFETPTLQPVYGGANARPFTTYHNF 218

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
              +F+ L  A + Y + L+  GF++ F+I   FR+ED  +   P EF  +++  ++ + 
Sbjct: 219 LDQTFF-LRIATELYLKRLLVGGFEKIFEIGKNFRNEDIDTSHNP-EFTLIEIYEAYRDY 276

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY------GTDKP 291
           +D+++ ME  L  +       + V+ +         + RI  ++A+R Y       T   
Sbjct: 277 NDMMDLMEEFLSSLVNAIHGCDQVTFDEVVISFAGPWRRITMEEAVREYAGIDVLATSLE 336

Query: 292 DLRNPIIMHNVTEH 305
           +L+   I H V E+
Sbjct: 337 ELQAFAIEHAVPEY 350



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 10/90 (11%)

Query: 481 QYDLVCNGFEIASGGIR-----NHMSEVMLQAFSNVG--ISKEVVENRFGGLYRAFQCGM 533
           +++L  NG EIA+G        + M+ +  Q    +   +  ++V+  F     A   GM
Sbjct: 401 RFELFINGMEIANGFSELNDPIDQMNRLEAQDRKRLSGDLEAQMVDYDF---INALGYGM 457

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           PP GG+  G+DR+VMLL    +++EV LFP
Sbjct: 458 PPTGGVGFGVDRVVMLLTNNTSIKEVILFP 487


>gi|312215312|emb|CBX95264.1| similar to aspartyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 1038

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 10/104 (9%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+ C G EI SGG R H ++++L+    + I    +E    G    FQ G PPHGG   
Sbjct: 599 FDIFCRGQEILSGGQRIHDADMLLEKMRKLKIDPSSMEEYIQG----FQWGAPPHGGGGI 654

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
           G++RI+ML++   N+R  S+FP            P    V+QLR
Sbjct: 655 GLERILMLMMSLGNIRHASMFPRDPKSL------PEKPVVKQLR 692



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 120/293 (40%), Gaps = 38/293 (12%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVV----ANPDSACFEI 61
           H+  D    DVG  V     +H +R      +F   R      Q V    A+        
Sbjct: 209 HNLQDFSAKDVGKEVIFRARIHHLRKMSSKFVFFIFRQQLVTIQGVLMEHADISKYFLYW 268

Query: 62  AKSVRSEWVLCIDGLVM---SRSAETINANIITGQIELSAQKIEILSVAEELPLPV---- 114
           A+ + +E V+ + G++    ++  E I A I   ++ + A  +E   + + LP  V    
Sbjct: 269 AEHLDAETVVLVKGILQEPKAKQGEVIGATIHDVEVSVHAMHVEA-PITDHLPFNVNEAE 327

Query: 115 ---------FGEREYPES---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM 156
                      + ++ E           R   R +DLR          ++ I +  R ++
Sbjct: 328 VTRADVEADLAKPDHKEGHNRVRIADRTRLNNRIIDLRSTASQSIFRIQSGICSLFRQQL 387

Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216
            +E FIE  TP L   + E            +G+F A  Q+PQ  KQ+ +++ F + ++I
Sbjct: 388 DSEGFIEIHTPKLQGGATESGASVFKIDYFGRGAFLA--QSPQLAKQMAISADFGKVYEI 445

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDIL----NTMENVLRGVFEEF 264
              FR E+  + R   E+  LD+EM   E   ++L     T +N+ +G++E +
Sbjct: 446 GAVFRAENSNTYRHLTEYTGLDLEMQIDEHYHEVLRVLDRTFKNIFKGIYERY 498


>gi|86159150|ref|YP_465935.1| asparaginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775661|gb|ABC82498.1| asparaginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 434

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 112/286 (39%), Gaps = 32/286 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74
           G  V L GW+H  R  G + FL +RD  G  Q V    N     F+ +  +  E  L + 
Sbjct: 15  GKEVTLHGWLHNRRSSGKLHFLQLRDGTGTIQCVVFKGNVTPEVFQASDHLPQETSLAVT 74

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           GLV       I         EL  + + +++  A E P+   G +E+  +   + R L L
Sbjct: 75  GLVKKDERSPIG-------FELDVRDVRVVARPALEFPI---GHKEHGVAFLMEQRHLWL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +  ++R       F     PI T ++ EG          + G  Y 
Sbjct: 125 RSQRQQVILRVRHTVEKAIRDFFDQRGFTLVDAPIFTPAACEGTSTLFEVPYFDLGKAY- 183

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E++F++ D  +  M
Sbjct: 184 LTQSGQLYME-AAAMALGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVAFMDLDGDMELM 242

Query: 254 ENVLRGVFE----------------EFSNGNTVSNNFLRICYDDAI 283
           E  +  V +                + S    V   F RI Y +A+
Sbjct: 243 EQFVSYVVQTALEKHRAELATVLERDVSKLENVKAPFPRITYTEAV 288


>gi|241957629|ref|XP_002421534.1| asparagine--tRNA ligase, putative; asparaginyl-tRNA synthetase,
           cytoplasmic, putative [Candida dubliniensis CD36]
 gi|223644878|emb|CAX40876.1| asparagine--tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 552

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 11/245 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + GWVHR+R   G+ F+ +RD  G  Q V   D A  +  + +  E  + I G V+S+
Sbjct: 130 VLVQGWVHRLRVQKGLAFITLRDGTGYLQCVLTGDLAKAKQTQELTIESTVSIKG-VISK 188

Query: 81  SAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
             E   A    G +EL A   +I+++A   +E       E   P ++    R L LR ++
Sbjct: 189 LPEGKTA---PGGVELKADHYQIIALAPSGDESFTNKVQENADP-NLLLDQRHLALRGES 244

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           L   +  R     ++R     E   E + P +  +  EG           + ++  L Q+
Sbjct: 245 LSAVMKVRAAYSAAIRRFFAEEGLTEVTPPCMVQNQVEGGSTLFKLDYYGEEAY--LTQS 302

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  +AS  D Y  I   FR E   + R   E+  ++ E+ F+  +D+L  +E +L
Sbjct: 303 SQLYLETCLASLGDVYC-IQESFRAEKSHTRRHLSEYTHIEAELVFITFEDLLTHLEKLL 361

Query: 258 RGVFE 262
               +
Sbjct: 362 SKTIQ 366


>gi|160902804|ref|YP_001568385.1| asparaginyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160360448|gb|ABX32062.1| asparaginyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 434

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 18/246 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCI 73
           +   V   GWV   R  G I FL +RD  G  Q +A     D   FE  + ++ E  + +
Sbjct: 15  INETVEFRGWVWNKRSSGKIAFLQLRDGTGFIQGIAEKKDFDDETFENIRKIKMESSIIL 74

Query: 74  DGLVMS--RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            G +    RS E +  +I + +        +I    E+ P+    ++E+      + R L
Sbjct: 75  QGTIKKDERSPENVELHITSFK--------KIQEPIEDYPI---SKKEHGIDFLMENRHL 123

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R       +  R  I+ ++R      NF    TPI T S  E A +       + G  
Sbjct: 124 WIRSRRQFHILNIRNEILKAIRDFYNQNNFTLIDTPIFTGSIGESAGNTFKLDYFDYGEV 183

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L Q  Q Y +   A  F + + + P FR E  ++ R   EF+  + E++F + +D + 
Sbjct: 184 Y-LAQTGQLYLEA-AAMSFGKVYNLGPTFRSEKSKTRRHLIEFWMNEAEVAFYKHEDNIK 241

Query: 252 TMENVL 257
             E+++
Sbjct: 242 LQESLV 247


>gi|110800440|ref|YP_697153.1| lysyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|123344474|sp|Q0TMI7|SYK_CLOP1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|110675087|gb|ABG84074.1| lysyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 501

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 133/292 (45%), Gaps = 26/292 (8%)

Query: 5   RTHSCGDLGVSD-----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           RTHS  D  V D      G  V+++G +   R  G ++F D+ D  G  Q+    D+   
Sbjct: 44  RTHSSAD--VKDNFEELEGKEVKVAGRLMSKRGQGKVVFADLADLPGKIQLFIKIDNVGE 101

Query: 60  EIAKSVRS----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           E  K  ++    +WV     +  ++           G++ +     E++  + + PLP  
Sbjct: 102 EALKEFKTFDLGDWVAATGEVFKTK----------MGEVSVKVTSFELICKSLK-PLPEK 150

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R +D+  +   K+  +KR++I+ ++R  +    F+E  TPIL+  + 
Sbjct: 151 WHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAG 210

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+ +GF++ +++   FR+E   S R   E
Sbjct: 211 GAAARPFITHHNALDIDMY-LRIATELYLKRLIVAGFEKVYEMGKNFRNEGV-SVRHNPE 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           F  +++  ++ + +D++  MEN++  V E+ +    V+     I +    RR
Sbjct: 269 FTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWRR 320



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M L  + ++R+V LFP
Sbjct: 460 ALETGMPPTGGLGIGIDRMIMFLTDSSSIRDVILFP 495


>gi|327291844|ref|XP_003230630.1| PREDICTED: lysyl-tRNA synthetase-like [Anolis carolinensis]
          Length = 600

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 24/264 (9%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVL 71
           G  V+++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++
Sbjct: 130 GVTVKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEYVHINNKLRRGDIV 189

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRF 130
            I G                G++ +   ++ +LS     LP   FG ++  +  RF+ R+
Sbjct: 190 GIQG---------NPGKTKKGELSIIPYEMTLLSPCLHMLPHLHFGLKD--KETRFRQRY 238

Query: 131 LDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVN 187
           LDL   D + +  + R +II  +R  +    F+E  TP++    P GA  + F+      
Sbjct: 239 LDLILNDFVRQKFIVRAKIITYVRTFLDELGFLEVETPMMNVI-PGGAVAKPFITHHNEL 297

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
             + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  
Sbjct: 298 DMNLY-MRVAPELYHKMLVVGGMDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYH 355

Query: 248 DILNTMENVLRGVFEEFSNGNTVS 271
           D++   E +L G+ +  + G  V+
Sbjct: 356 DLMEITEQLLSGMVKRITGGYKVT 379



 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 485 VCNGFEIASGGIRNH-MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +CN +   +   R H + E   +A ++       ++  F     A + G+PP  G   GI
Sbjct: 502 ICNAYTELNDPFRQHQLFEDQAKAKADGDDEAMFIDENFC---TALEYGLPPTAGWGMGI 558

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           DR+ M L  + N++EV LFP
Sbjct: 559 DRLAMFLTDSNNIKEVLLFP 578


>gi|254368388|ref|ZP_04984405.1| lysine-tRNA ligase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157121282|gb|EDO65483.1| lysine-tRNA ligase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 576

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV       PD   
Sbjct: 122 RYTDKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 180

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +E  K+      LC  G ++  +      N  TG++ + A   EIL+ A   PLP     
Sbjct: 181 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 231

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++        
Sbjct: 232 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAA 291

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F           Y L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  
Sbjct: 292 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGISSRHNP-EFTM 349

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287
           L+  M++ + +D+++  E++L  + +E      +            + RI   D+I +Y 
Sbjct: 350 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 409

Query: 288 TD--KPDL 293
            D  K DL
Sbjct: 410 DDITKEDL 417



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VM L  ++++R+V LFP
Sbjct: 535 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 571


>gi|164686646|ref|ZP_02210674.1| hypothetical protein CLOBAR_00239 [Clostridium bartlettii DSM
           16795]
 gi|164604375|gb|EDQ97840.1| hypothetical protein CLOBAR_00239 [Clostridium bartlettii DSM
           16795]
          Length = 507

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 123/261 (47%), Gaps = 20/261 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---IAKSVRSEWVLCID 74
           G  V+++G +   R  G   F+DI+D  G  Q     D+   E   + K+     ++ ++
Sbjct: 60  GENVKIAGRIMSKRIQGKAGFIDIQDSEGRIQCYVRKDAIGEEEYPVFKTYDIGDIIGVE 119

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
           G V     E         +I + A  + +LS + + LP    G ++    +R++ R++DL
Sbjct: 120 GTVFKTKKE---------EISVKATSVVLLSKSLQVLPEKYHGLKDV--DLRYRQRYVDL 168

Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +  + +  + RT+ + ++R  +    F+E  TPIL T +    AR F+          
Sbjct: 169 IVNPEVKQAFLTRTKALKALRSYLDDRGFLEVETPILNTIAGGANARPFITHHNTLDIPM 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + Y + L+  GFD+ +++   FR+E    +  P E+  ++M  ++ + +D++ 
Sbjct: 229 Y-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDVNHNP-EYTAIEMYQAYADFNDMME 286

Query: 252 TMENVLRGVFEEFSNGNTVSN 272
             ENV+     E + G+TV N
Sbjct: 287 LTENVI-AHMAEVATGSTVVN 306



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR++MLL  + ++R+V LFP
Sbjct: 457 ALEVGLPPTGGLGIGIDRVMMLLTNSASIRDVILFP 492


>gi|81299641|ref|YP_399849.1| asparaginyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81168522|gb|ABB56862.1| asparaginyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 462

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 126/307 (41%), Gaps = 50/307 (16%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCID 74
           G  V + GW+   R      F+++ D   +   QVV   + A +E +AK + +   + ++
Sbjct: 16  GQTVVVRGWIRTARQLKEFTFVEVNDGSCLKGIQVVLGQELADYEMLAKQLDTGAAIAVE 75

Query: 75  GLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           G +++  A+        GQ +EL A  +EI+  A+    P+  +R   E +R     L  
Sbjct: 76  GQLVASPAK--------GQRVELQAASVEIVGGADPEQYPLQKKRHSFEFLR-TIAHLRP 126

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R ++L   +  R     ++        F+   TPI+TAS  EGA +    + ++      
Sbjct: 127 RTNSLGAVMRVRNAAATAIHDFFQERGFLWVHTPIITASDCEGAGELFTVTNLDLDKLGQ 186

Query: 194 LPQAPQ----------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
             QAP                 Q +  +MA  F   +   P FR E+  + R   EF+ +
Sbjct: 187 SQQAPDFEQDFFGKRAYLTVSGQLEAEIMALAFSNVYTFGPTFRAENSNTSRHLAEFWMV 246

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLR 276
           + EM+F +    ++  E  L+ VF+  S+                        ++N+F R
Sbjct: 247 EPEMAFCDLGGDMDLAEAFLKFVFQRVSDRCSEDLEFFNQRIDSEVLNRAETILNNDFER 306

Query: 277 ICYDDAI 283
           + Y DAI
Sbjct: 307 VSYTDAI 313


>gi|254373628|ref|ZP_04989112.1| lysine-tRNA ligase [Francisella novicida GA99-3548]
 gi|151571350|gb|EDN37004.1| lysine-tRNA ligase [Francisella novicida GA99-3548]
          Length = 576

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV       PD   
Sbjct: 122 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 180

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +E  K+      LC  G ++  +      N  TG++ + A   EIL+ A   PLP     
Sbjct: 181 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 231

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++        
Sbjct: 232 LADQEMRYRQRYVDLITNEKARGVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAA 291

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F           Y L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  
Sbjct: 292 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTM 349

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287
           L+  M++ + +D+++  E++L  + +E      +            + RI   D+I +Y 
Sbjct: 350 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 409

Query: 288 TD--KPDL 293
            D  K DL
Sbjct: 410 DDITKEDL 417



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VM L  ++++R+V LFP
Sbjct: 535 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 571


>gi|18311447|ref|NP_563381.1| lysyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|168218225|ref|ZP_02643850.1| lysyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|169343177|ref|ZP_02864198.1| lysyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|39932227|sp|Q8XHL8|SYK_CLOPE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|18146131|dbj|BAB82171.1| lysine-tRNA ligase [Clostridium perfringens str. 13]
 gi|169298729|gb|EDS80805.1| lysyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|182379764|gb|EDT77243.1| lysyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 501

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 133/292 (45%), Gaps = 26/292 (8%)

Query: 5   RTHSCGDLGVSD-----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           RTHS  D  V D      G  V+++G +   R  G ++F D+ D  G  Q+    D+   
Sbjct: 44  RTHSSAD--VKDNFEELEGKEVKVAGRLMSKRGQGKVVFADLADLPGKIQLFIKIDNVGE 101

Query: 60  EIAKSVRS----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           E  K  ++    +WV     +  ++           G++ +     E++  + + PLP  
Sbjct: 102 EALKEFKTFDLGDWVAATGEVFKTK----------MGEVSVKVTSFELICKSLK-PLPEK 150

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R +D+  +   K+  +KR++I+ ++R  +    F+E  TPIL+  + 
Sbjct: 151 WHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAG 210

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+ +GF++ +++   FR+E   S R   E
Sbjct: 211 GAAARPFITHHNALDIDMY-LRIATELYLKRLIVAGFEKVYEMGKNFRNEGV-SVRHNPE 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           F  +++  ++ + +D++  MEN++  V E+ +    V+     I +    RR
Sbjct: 269 FTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWRR 320



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M L  + ++R+V LFP
Sbjct: 460 ALETGMPPTGGLGIGIDRMIMFLTDSSSIRDVILFP 495


>gi|330797506|ref|XP_003286801.1| hypothetical protein DICPUDRAFT_150804 [Dictyostelium purpureum]
 gi|325083244|gb|EGC36702.1| hypothetical protein DICPUDRAFT_150804 [Dictyostelium purpureum]
          Length = 464

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 141/360 (39%), Gaps = 60/360 (16%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSV 65
             GD G+ D     ++ GWV  +R    + F+++ D   +   Q+V + D+       ++
Sbjct: 22  KSGDAGI-DSNKIHKVKGWVRNIRIQKNVSFIEVNDGSSVQGLQIVGDKDTFS-----NI 75

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPL-PVFGEREYPES 123
           +    +  +G +M    +         Q+E+  + I+++     E PL P     E+   
Sbjct: 76  KHGSAVEAEGNLMKGEGKN-------PQVEMQLKNIKLIGDCPNEFPLQPKHHTFEFLRE 128

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-RDFLV 182
           I      L  R +T       R      +        FI   TPI+TAS  EG    F V
Sbjct: 129 IAH----LRSRGNTAGALFRMRNESTQLIHQYFNKNGFINVHTPIITASDCEGGGEQFQV 184

Query: 183 PSRVNQGS-----FYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            S ++  S     F+  P       Q +  + AS   R +   P FR E   + R   EF
Sbjct: 185 VSTLDNKSNKQPHFFGEPAYLTVSGQLEAEIFASSHSRVYTFGPTFRAEKSNTPRHLSEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNN 273
           + ++ E++F++ +D L+  E+ L+ V            EF N             TV N 
Sbjct: 245 WMIEPEIAFIDLNDNLDIAEDFLKYVINNLLINCKDDIEFFNKRIDTGLIERLKKTVDNK 304

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHN---------VTEHFVHSEFRVFSKILSVNPGY 324
           F+R+ Y DAI      K   +N I M +         +T+HF +    + +   S+ P Y
Sbjct: 305 FIRLEYKDAINLLKESKEITQNSIEMGDDLQREHEKYITQHFGNVPVFIINWPKSIKPFY 364



 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G IR    +++L+   ++G+ ++  E          + G  PHGG   G +R +  
Sbjct: 387 ELIGGSIREERYDILLKNIQDLGMDQKTYE----WYLDLRKYGSVPHGGFGLGFERFLQY 442

Query: 550 LLGAKNVREVSLFPMSQNFC 569
           + G +N+R+V   P  QN+C
Sbjct: 443 VTGLQNIRDVIPIPRYQNYC 462


>gi|322823684|gb|EFZ29386.1| lysyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 674

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 143/320 (44%), Gaps = 47/320 (14%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-----PDSA 57
           RY   S GD  +    + VR++G V  VR  G IIF+ IR +    QVV           
Sbjct: 110 RYGYLSSGDKAMQ---ATVRVAGRVTSVRDIGKIIFVTIRSNGNELQVVGQVGEHFTRED 166

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPV 114
             ++  S+R   ++  DG         +   +  G++ ++A ++ ILS     +++  P 
Sbjct: 167 LKKLKVSLRVGDIIGADG---------VPCRMQRGELSVAASRMLILSPYVCTDQVVCPN 217

Query: 115 FGEREYP----ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
              R +       ++++YRF D+  +  + + I KR  ++ ++R      NF+E  TP+L
Sbjct: 218 L--RGFTVLQDNDVKYRYRFTDMMTNPCVIETIKKRHVMLQALRDYFNERNFVEVETPVL 275

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T +S   A+ F+     N    + L  AP+ + +  +  G +R ++I   FR+ED    
Sbjct: 276 HTVASGANAKSFVTHHNANAMDLF-LRVAPELHLKQCIVGGMERIYEIGKVFRNEDADRS 334

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLR------------GVFEEFSNGNTVSNN--- 273
             P EF   +   ++   +D++   E++ R             ++ E ++GN V+ +   
Sbjct: 335 HNP-EFTSCEFYAAYHTYEDLMPMTEDIFRQLAMRVNGTTLVQIYPENAHGNPVTVDLGK 393

Query: 274 -FLRI-CYDDAIRRYGTDKP 291
            F R+  YD+  R  G + P
Sbjct: 394 PFRRVSVYDEVQRVSGVEFP 413



 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 25/38 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           ++ Q G+PP  G   GIDR +MLL  + N+R+  +FP+
Sbjct: 539 KSLQVGLPPTAGWGMGIDRALMLLTNSSNIRDGIIFPL 576


>gi|161506412|ref|YP_001573524.1| lysyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|189082966|sp|A9MRI4|SYK_SALAR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|160867759|gb|ABX24382.1| hypothetical protein SARI_04610 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 505

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 25/290 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  K R++I+  +R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 NTFKTRSKILAGIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298

Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY--GTDKPDLRN 295
           R + ++   GNT              F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQDVL-GNTQVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|53802401|ref|YP_112835.1| lysyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|53756162|gb|AAU90453.1| lysyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 496

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 31/289 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V+L+G +   R  G   F  I+D  G  Q+    D     + +  +S W    V+ ++G 
Sbjct: 60  VKLAGRLMGKRIMGKASFAHIQDMSGRIQIFLQRDGLAEGVYEEFKS-WDIGDVIGVEGT 118

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V             TG++ + A  I +L+ +   PLP           R++ R+LDL  +
Sbjct: 119 VFRTK---------TGELSVKASNIRLLTKSLR-PLPEKFHGLTDAETRYRQRYLDLLMN 168

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYAL 194
              + + + R+ I+  +R  +    FIE  TP++    P GAR     +  N  G    L
Sbjct: 169 EESRRVFQLRSAIVRYIRDFLSERGFIEAETPMMQVI-PGGARAKPFVTHHNALGLDLYL 227

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF++ F+I   FR+E   +   P EF  ++   ++ +  D+++  E
Sbjct: 228 RIAPELYLKRLVVGGFEKVFEINRSFRNEGLSTRHNP-EFTMIEFYQAYADYRDLMDLTE 286

Query: 255 NVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPDLR 294
            ++RG+ +    G  V++          F R+   ++I  Y    PD+R
Sbjct: 287 TLMRGIAQNLLGGTVVTHQGKDYDLGRPFRRMTVLESIIHY---NPDIR 332



 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VM    + ++R+V LFP
Sbjct: 454 RALEYGLPPTAGEGIGIDRLVMFFTDSPSIRDVILFP 490


>gi|301632175|ref|XP_002945166.1| PREDICTED: lysyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 476

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 126/282 (44%), Gaps = 30/282 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V ++G +   R  G   F  ++D  G  Q+    D+   E+  + +  W    +L  +G 
Sbjct: 73  VSVAGRMMLKRVMGKASFTTLQDATGRIQLYVTRDALGEELYAAFK-HWDLGDILGAEGQ 131

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +M            TG++ +   ++ +L+ +   P+P        + ++++ R++DL  D
Sbjct: 132 LMQTK---------TGELSVKVTRLRLLTKSLR-PMPDKFHGVADQELKYRQRYVDLMTD 181

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
               +  V R++ +NSMR  M+   F+E  TP+L    P G  AR F+      +   Y 
Sbjct: 182 EAARQRFVARSKAVNSMREFMVQHGFLEVETPMLH-PIPGGANARPFVTQHNALEQDMY- 239

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D++   
Sbjct: 240 LRIAPELYLKRLLVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYQDLMGFT 298

Query: 254 ENVLR-------GVFEEFSNGNTV--SNNFLRICYDDAIRRY 286
           E ++R       G  +    G  V  S  F R+   +AI +Y
Sbjct: 299 EQLVRNTALKAVGTLQLSYQGRAVDLSQPFARLTIREAIYQY 340


>gi|16761821|ref|NP_457438.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|29143308|ref|NP_806650.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|213616408|ref|ZP_03372234.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
 gi|213646960|ref|ZP_03377013.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
 gi|33301733|sp|Q8Z3X8|SYK1_SALTI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|25293040|pir||AF0871 lysyl tRNA synthetase (LysRS) [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16504123|emb|CAD02870.1| lysyl tRNA synthetase (LysRS) [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138942|gb|AAO70510.1| lysyl tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
          Length = 505

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 130/289 (44%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  K R++I+  +R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 NTFKTRSKILAGIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295
           R + ++      V            F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQDVLGTTQVPYGDEVFDFGKPFEKLTMHEAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|115315489|ref|YP_764212.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156503376|ref|YP_001429441.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|115130388|gb|ABI83575.1| lysine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156253979|gb|ABU62485.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 576

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV       PD   
Sbjct: 122 RYTDKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 180

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +E  K+      LC  G ++  +      N  TG++ + A   EIL+ A   PLP     
Sbjct: 181 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 231

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++        
Sbjct: 232 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAA 291

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F           Y L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  
Sbjct: 292 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGISSRHNP-EFTM 349

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287
           L+  M++ + +D+++  E++L  + +E      +            + RI   D+I +Y 
Sbjct: 350 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 409

Query: 288 TD--KPDL 293
            D  K DL
Sbjct: 410 DDITKEDL 417



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VM L  ++++R+V LFP
Sbjct: 535 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 571


>gi|242803977|ref|XP_002484282.1| aspartyl-tRNA synthetase, cytoplasmic [Talaromyces stipitatus ATCC
           10500]
 gi|218717627|gb|EED17048.1| aspartyl-tRNA synthetase, cytoplasmic [Talaromyces stipitatus ATCC
           10500]
          Length = 946

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 7/149 (4%)

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           P+  R   R LDLR  T       ++ + N  R  +    FIE  TP L  S+ E     
Sbjct: 261 PDRTRLSNRILDLRTGTAQAIFRIQSAVGNLWRAALDERGFIEIHTPKLQGSATESGASV 320

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R   E+  LD+E
Sbjct: 321 FELNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIE 378

Query: 241 MSFVEQ-DDILNTMENVLR----GVFEEF 264
           M+  E   ++L T++ VLR    G++ ++
Sbjct: 379 MAIDEHYHEMLETIDAVLRHIITGIYSKY 407



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H   ++      VGI    +E+   G    F+ G PPH G   
Sbjct: 508 FDIFVRGQEIVSGGQRIHDPSMLEDNMKKVGIKPSDMEDYLEG----FRWGAPPHAGAGV 563

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R VMLLL   N+R  SLF
Sbjct: 564 GLERFVMLLLKLGNIRLASLF 584


>gi|254372145|ref|ZP_04987637.1| hypothetical protein FTCG_01528 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569875|gb|EDN35529.1| hypothetical protein FTCG_01528 [Francisella novicida GA99-3549]
          Length = 575

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV       PD   
Sbjct: 121 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 179

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +E  K+      LC  G ++  +      N  TG++ + A   EIL+ A   PLP     
Sbjct: 180 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 230

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++        
Sbjct: 231 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAA 290

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F           Y L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  
Sbjct: 291 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTM 348

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287
           L+  M++ + +D+++  E++L  + +E      +            + RI   D+I +Y 
Sbjct: 349 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 408

Query: 288 TD--KPDL 293
            D  K DL
Sbjct: 409 DDITKEDL 416



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VM L  ++++R+V LFP
Sbjct: 534 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 570


>gi|322493438|emb|CBZ28725.1| putative aspartyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 550

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 25/293 (8%)

Query: 4   YRTHS---CGDLGVSD-VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---- 55
           Y++H+     +L   + VG  V +   V   R  G + F+ +RD     Q +A  +    
Sbjct: 60  YKSHTHIPVAELSQPELVGKTVLIRARVSTTRKKGKMAFMVLRDGSESVQAMAAVEGDVP 119

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPV 114
               +    + +E ++ ++  V S+  + I++      IEL  ++I  ++ +   LP  +
Sbjct: 120 KEMIDFMGQIATESIVDVEATV-SKVEQPISSTS-HSDIELKVKRIHTVTESLRTLPFTL 177

Query: 115 --FGEREYPE------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                +E  E        R   R++DLR          ++R+    R  +I  +F E  +
Sbjct: 178 EDASRKESDEGAKVNLDTRLNSRWMDLRTPACGAIFRLQSRVCQYFRQFLIDNDFFEIHS 237

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P +  +  EG  +       N+  F  L Q+PQ YKQ+++     R F++ P FR E+  
Sbjct: 238 PKIINAPSEGGANVFKLEYFNR--FAYLAQSPQLYKQMVLQGDVPRVFEVGPVFRSENSN 295

Query: 227 SDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
           + R   EF  LD+EM   E   ++L+  E++   +FE  +   T +     +C
Sbjct: 296 THRHLTEFVGLDVEMRIDEHYYEVLDVAESLFNYIFEHLA---THTKELTSVC 345



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 12/86 (13%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGIS--KEVVENRFGGLYRAFQCGMPPHG 537
           YD+   G EI+SG  R H  +++L      NV ++  KE V+        +F+ G  PHG
Sbjct: 465 YDMFIRGEEISSGAQRIHDPDLLLARAKMLNVDLTPIKEYVD--------SFRLGAWPHG 516

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G++R+VML LG  NVR  SLFP
Sbjct: 517 GFGVGLERVVMLYLGLSNVRLASLFP 542


>gi|281206109|gb|EFA80298.1| hypothetical protein PPL_07128 [Polysphondylium pallidum PN500]
          Length = 547

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 131/279 (46%), Gaps = 22/279 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRD-HYGITQVVANPDS----A 57
           +R     DL  +   + + +   + +   HG  ++F+ +R  H+ I  +    +S     
Sbjct: 73  FRYVKIKDLDPTYHNNVITMRARISQTSTHGKSLVFIGLRQQHFRIQALAVERESLVSKQ 132

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--- 114
                + +  E ++ ++  V+   A+ I  +     +ELS +++ ++S ++ L + +   
Sbjct: 133 MIRFIRQLNEESIVDLEATVIYDPAKQIKKST-HPNLELSIKRLYVISKSKPLEISLEDL 191

Query: 115 -FGERE-----YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTP 167
             G  E      P S R  Y+ LDLR  + H++I + ++++ N +  R++ E FIE  +P
Sbjct: 192 SLGSSESQAYSVPLSTRTNYKTLDLRV-SAHQSIFQLQSQVTNIIYNRLVKEKFIEIHSP 250

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            L   + +    F   S    G    L  +   YKQ+ +AS F+R F+I P +R E   +
Sbjct: 251 KLLKWNLDNWSSF---SLNYFGETAHLATSNILYKQMAIASDFNRIFEIGPIYRKEHAST 307

Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFS 265
            R   EF ++D+EM   E   ++L+ ++ +   +FE  +
Sbjct: 308 HRHLCEFTRIDIEMRIEEHYHELLDQIDQMFIEIFERLN 346


>gi|157372123|ref|YP_001480112.1| lysyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166980070|sp|A8GIP4|SYK_SERP5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157323887|gb|ABV42984.1| lysyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 505

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 23/291 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G 
Sbjct: 64  LGVEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGVYNEEFKKWDL---GD 120

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL   
Sbjct: 121 ILGARGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           D   K    R++I+ +MR  M+   F+E  TP++    P GA  R F+          Y 
Sbjct: 178 DESRKTFQVRSQIMAAMRNFMVERGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY- 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   
Sbjct: 236 LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIELT 294

Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDL 293
           E++ R + +       V            F+++   +AI++Y   TD  DL
Sbjct: 295 ESLFRTLTQNVLGNTQVQYGDEVFDFGKPFVKLTMTEAIKKYRPETDLADL 345



 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F++   +K+  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFADQANAKDAGDDEAMFYDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|307822370|ref|ZP_07652602.1| lysyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307736936|gb|EFO07781.1| lysyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 499

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 12/243 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+L+G +   R  G   F  I+D  G  Q+    D+           +W   I  +V   
Sbjct: 62  VKLAGRMMTRRVMGKASFCHIQDMSGQIQLYVTRDALPESFYNEQFKKW--DIGDIV--- 116

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
            AE +     TG++ +    I +L+ A   PLP        + I+++ R+LDL      +
Sbjct: 117 GAEGVLFKTQTGELSVKIDDIRLLTKALR-PLPEKFHGIADQEIKYRQRYLDLIMSEQSR 175

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  + R++++  +R  +I  +F+E  TP++    P GA  R F           Y L  A
Sbjct: 176 NTFLIRSKVVAYIRQFLIERDFLEVETPMMQMI-PGGATARPFTTFHNALDMELY-LRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   +   P EF  L+   ++ E  D+++  E +L
Sbjct: 234 PELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMLEFYQAYAEYHDLMDLTEAML 292

Query: 258 RGV 260
           RGV
Sbjct: 293 RGV 295



 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EIA+G    + +E     F      KE  ++    F   Y  A + GMPP 
Sbjct: 407 RFEFFVGGREIANGFTELNDAEDQAARFQKQVEEKEAGDDEAMHFDADYIVALEHGMPPT 466

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML   A ++R+V LFP
Sbjct: 467 AGEGIGIDRLVMLFADAPSIRDVLLFP 493


>gi|223042067|ref|ZP_03612243.1| lysyl-tRNA synthase [Actinobacillus minor 202]
 gi|223017142|gb|EEF15578.1| lysyl-tRNA synthase [Actinobacillus minor 202]
          Length = 501

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 21/279 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V+++G +   R  G   F  I+D  G  Q+    D+    +A+ V S+ V   D G ++ 
Sbjct: 64  VKVAGRIMLKRVMGKASFFTIQDVSGQVQLYVARDN----LAEGVYSDKVGLWDLGDIVG 119

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138
            S         TG++ +   ++E+L+ +   PLP   +    + IR++ R+LDL   +  
Sbjct: 120 VSGTLFKTK--TGELTVRCSEVELLTKSLR-PLPNKVQGITDQEIRYRQRYLDLISNEES 176

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            +  + R+++++ +R   +   FIE  TP+L        AR F+          Y L  A
Sbjct: 177 RRTFMIRSQVVSGIRQFFLERGFIEVETPMLQVIPGGAAARPFVTHHNALDVDMY-LRIA 235

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E       P EF  ++   ++ +  D+++  E +L
Sbjct: 236 PELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELL 294

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
           R +  +      V            F RI   +AI +YG
Sbjct: 295 RKLALDILGTTDVPYGEYVFDFGKPFERITMHEAIVKYG 333



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M+   A ++R+V LFP
Sbjct: 460 ALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILFP 495


>gi|116512707|ref|YP_811614.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           SK11]
 gi|123025218|sp|Q02X21|SYN_LACLS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116108361|gb|ABJ73501.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           SK11]
          Length = 447

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 116/295 (39%), Gaps = 42/295 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  WV      G + FL +RD     Q VV  P+          +A F+  K +
Sbjct: 14  VGETVKIGAWVADKSGKGKLQFLQLRDGTAFFQAVVFKPNMIEKFGEEEGTAKFDEIKHL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V   S             EL   ++E++  + + P+     +E+     
Sbjct: 74  SQETSVYVTGVVKEDSRSKFG-------YELDVTELEVIGHSHDYPIT---PKEHGVEFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E   +      
Sbjct: 124 LDNRHLWLRSKRQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILSGNAAENTTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
               +F  L Q+ Q Y +   MA G  R F   P FR E  ++ R   EF+ +D E  FV
Sbjct: 184 FGNSAF--LSQSGQLYLEAGAMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYPFV 239

Query: 245 EQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
             D+ L+  E     +++GV +  +                +   F R+ YDDAI
Sbjct: 240 THDESLDIQEAYVKALIQGVLDNAAYALETLERDTSMLQKYIDTPFKRVSYDDAI 294


>gi|256080758|ref|XP_002576644.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238661921|emb|CAZ32881.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 526

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 127/302 (42%), Gaps = 36/302 (11%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVVANPDSACFEI---AKSVRSEWV 70
           S++   V + G +HR R  G + F  +R   Y I  V++  +    E+     S+  E +
Sbjct: 81  SNINQNVWVRGRLHRSRMKGKLCFFILRLQDYRIQNVLSVGEQTPKEMLAFVSSISKESI 140

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE----------RE 119
           + + G V+         N  T  IE+  +K+ ++S A   LPL +               
Sbjct: 141 IDVFGRVLKSPVLIEGCNPDT--IEIHCEKVFVVSAALPTLPLQIEDAMRPDDDETTLSR 198

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R   R +DLR             ++      +    F+   TP + +++ EG  +
Sbjct: 199 VNQDTRLDNRCIDLRTPVNQAIYRIEAGVVKFFMEYLTNAGFVNIHTPKMISAASEGGAN 258

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S  + GS Y L Q+PQ YKQ+ +A+ F+R F I   FR ED  + R   EF  LD+
Sbjct: 259 VFRVSYFS-GSAY-LAQSPQLYKQMAIAADFERVFTIGSVFRAEDSNTHRHLTEFVGLDI 316

Query: 240 EMSFVEQ-----DDILNTMENVLRGVFEEFSNGNTV------SNNF------LRICYDDA 282
           EM+F        D I +   ++ +G+  E+     +      S  F      LR+ Y DA
Sbjct: 317 EMAFKNHYHEVVDLIADMFVHMFKGLQREYQTEIQIICQQYHSEPFEFLQPTLRLQYRDA 376

Query: 283 IR 284
           IR
Sbjct: 377 IR 378



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H   V+L   S      +V   +      AF+ G PPH G   
Sbjct: 441 YDFFMRGEEIMSGAQRIH-DPVLL---SERATHHKVDLEKIKAYIDAFRYGCPPHAGGGI 496

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  N+R+ S+FP
Sbjct: 497 GLERVTMLFLGLDNIRKTSMFP 518


>gi|322712478|gb|EFZ04051.1| aspartate-tRNA ligase [Metarhizium anisopliae ARSEF 23]
          Length = 913

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 14/266 (5%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ-VVANPDSACF 59
           H Y  +   +L    +G+ V     +   R     + FL  RD     Q V++       
Sbjct: 144 HPYELNPIAELDKLPLGTEVNFRARISTQRQLSKNLDFLLFRDQTNTVQGVLSREYLDMV 203

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              + + SE ++ ++G V+    E + +   +G +E+    I +++ A   P   F   +
Sbjct: 204 RWVQKLNSESLVQVNG-VLKAPPEAVRSATHSG-VEVEVHSIHLVNAAHGAP---FTNYK 258

Query: 120 YPESIR--FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            PE++R     R LDLR  +       R+ +    R  +  + F+E +TP L  ++ E  
Sbjct: 259 PPETLRNRMTSRILDLRHPSNQALFRIRSMVTRMFRETLEQQGFVEINTPKLQPAATESG 318

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                 +   + +F A  Q+PQ  KQ  +++ F R +++ P FR E+  + R   E+  L
Sbjct: 319 AAVFKVNYFGRNAFLA--QSPQLAKQSAVSADFGRVYEVGPVFRAENSNTHRHLTEYTGL 376

Query: 238 DMEMSFVEQD--DILNTMENVLRGVF 261
           D+EMS +E D  +++  ++  L+ VF
Sbjct: 377 DIEMS-IEHDYHEVICVIDEFLKNVF 401



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H +  + +    VGIS++ +E+       AF  G PPH G   
Sbjct: 500 FDIFIRGQEICSGGQRIHDAAELRENMQAVGISEDGMEDYLA----AFDLGAPPHAGAGL 555

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++RIV  +L   +VR  SLF
Sbjct: 556 GLERIVAWMLELGDVRYASLF 576


>gi|208780603|ref|ZP_03247942.1| lysyl-tRNA synthetase [Francisella novicida FTG]
 gi|208743578|gb|EDZ89883.1| lysyl-tRNA synthetase [Francisella novicida FTG]
          Length = 560

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV       PD   
Sbjct: 106 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 164

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +E  K+      LC  G ++  +      N  TG++ + A   EIL+ A   PLP     
Sbjct: 165 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 215

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++        
Sbjct: 216 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAA 275

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F           Y L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  
Sbjct: 276 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTM 333

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287
           L+  M++ + +D+++  E++L  + +E      +            + RI   D+I +Y 
Sbjct: 334 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 393

Query: 288 TD--KPDL 293
            D  K DL
Sbjct: 394 DDITKEDL 401



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VM L  ++++R+V LFP
Sbjct: 519 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 555


>gi|119433806|gb|ABL74966.1| Orf (-)2 [Streptoalloteichus hindustanus]
          Length = 433

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 21/246 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR++GWVHR R    + F+ +RD  G+ QVV  P SA   +A+ +  E V+ + G V
Sbjct: 15  GAVVRVAGWVHRRRRLKSVTFVVVRDRSGLAQVVL-PASAEPAVAE-LPEETVVEVRGRV 72

Query: 78  MSRSAETINANIITGQIE-----LSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            +       A I    I       +A   ++   A    LP              +  + 
Sbjct: 73  TANPQAPGGAEITEPVISALSEPAAAPPFDLYRPAVTATLPTI----------LDHAPVT 122

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR   L       +  +   R  +    F E  TP +  S  E   +        + ++ 
Sbjct: 123 LRHPRLRAGFEVASASVAGFRAALDDLGFTEVRTPKIVGSVTESGANVFGIDYFGRRAYL 182

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILN 251
           A  Q+PQ +KQ L+   F+R +++ P FR E   + R   ++  LD E+ FV +  D++ 
Sbjct: 183 A--QSPQLFKQALVGV-FERVYEVGPVFRAEPHDTTRHLAQYTSLDAELGFVADHHDVMA 239

Query: 252 TMENVL 257
            + +V+
Sbjct: 240 VLRDVV 245



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G E+ +GG R H     L A +  G S E  ++        F  GMPPHGG A 
Sbjct: 348 FDLLFRGLELVTGGQRLHRRVDYLAALAERGESPEPYQS----YVDVFAHGMPPHGGFAI 403

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R    LLG  N+REV+LFP
Sbjct: 404 GLERWTARLLGVSNIREVTLFP 425


>gi|15602054|ref|NP_245126.1| lysyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|13431878|sp|P57822|SYK_PASMU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|12720410|gb|AAK02273.1| LysU [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 501

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 29/286 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V+++G +   R  G   F+ ++D  G  Q+    D+    I      +W    ++ + G 
Sbjct: 63  VKVAGRIMTRRAMGKATFITLQDMSGRIQLYVARDNLPEGIYADDVGQWDLGDIIGVKGT 122

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           +             T ++ +   ++++L+ A   PLP        +  R++ R+LDL   
Sbjct: 123 LFKTK---------TNELTVRCTEVQLLTKALR-PLPDKFHGLSDQETRYRQRYLDLIAN 172

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           +   +  + R+++I  +R   +++ F+E  TP+L    P GA  R F+          Y 
Sbjct: 173 EDSRRTFIIRSKVIAGIREYFLSKGFMEVETPMLQII-PGGASARPFVTHHNALDVDMY- 230

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ +  D+++  
Sbjct: 231 LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADYHDLMDNT 289

Query: 254 ENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDK 290
           E +LR +  +      V            F RI   DAI +YG +K
Sbjct: 290 EELLRKLAMDILGTTIVPYGELEFDFGKPFERITMHDAILKYGAEK 335



 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536
           +++L   G EI +G    + +E   + F     +KE  ++    +      A + G+PP 
Sbjct: 410 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVTALEHGLPPT 469

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+ ML   A ++R+V LFP
Sbjct: 470 AGEGLGIDRLAMLFANAASIRDVILFP 496


>gi|330718514|ref|ZP_08313114.1| lysyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 494

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 22/261 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCIDG 75
           G  V ++G +   R  G IIF DIRD  G  Q+ A  D     + I K       L I G
Sbjct: 59  GQEVIIAGRMIAKRGAGKIIFADIRDVSGKIQIYAKRDELGENYTIIKRSDLGDFLGIKG 118

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL- 133
            VM   A            EL+    E+  + + L P+P           R++ R+LDL 
Sbjct: 119 KVMKTEAG-----------ELTVFVTELTHLTKALRPMPDKFHGIADVETRYRKRYLDLI 167

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
             +   K   +R+RII+++R  M +  F+E  TPIL T +    AR F+          Y
Sbjct: 168 ANEDSFKKFQQRSRIISAIRDYMDSNEFLEVETPILQTEAGGAAARPFITHHNALNIDMY 227

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            +  A + Y + L+  G +R +++   FR+E  DP+ +    EF  ++   ++ +  D++
Sbjct: 228 -MRIATELYLKRLVVGGMERVYEMGRIFRNEGMDPKHN---PEFTTMESYAAYWDFTDVM 283

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
           N  E + +   +  S+  T++
Sbjct: 284 NETEGIFKAAAKVVSDDLTIN 304



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++MLL  +  +R+V LFP
Sbjct: 455 ALEYGMPPTGGLGVGIDRLIMLLTNSDTIRDVVLFP 490


>gi|261820185|ref|YP_003258291.1| lysyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261604198|gb|ACX86684.1| lysyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 505

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 122/260 (46%), Gaps = 12/260 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + ++G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L  
Sbjct: 61  LEELGIEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
             +   +N  + R+ ++ ++R  M+   F+E  TP++ A  P GA  R F+         
Sbjct: 175 IANDESRNTFRIRSNVMAAIRRFMVDHGFMEVETPMMQAI-PGGASARPFITHHNALDID 233

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++
Sbjct: 234 MY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYKDLI 291

Query: 251 NTMENVLRGVFEEFSNGNTV 270
              EN+ R + ++     TV
Sbjct: 292 VLTENLFRTLTQDVLGSTTV 311



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|169602527|ref|XP_001794685.1| hypothetical protein SNOG_04267 [Phaeosphaeria nodorum SN15]
 gi|160706191|gb|EAT88027.2| hypothetical protein SNOG_04267 [Phaeosphaeria nodorum SN15]
          Length = 857

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+ C G EI SGG R H ++++L+    + +  + +E    G    FQ G PPHGG   
Sbjct: 610 FDIFCRGQEILSGGQRIHDADMLLEKMRKMKVDPQSMEEYIQG----FQWGAPPHGGGGI 665

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RI+ML++   N+R  S+FP
Sbjct: 666 GLERILMLMMSLGNIRHASMFP 687



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 115/283 (40%), Gaps = 34/283 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSV 65
           +    DVG  V     +H +R      +F   R      Q V    A+        A+ +
Sbjct: 224 EFSAKDVGKEVVFRARIHHLRKMSSKFVFFMFRQQLATIQGVLMEHADISKYMLYWAEHL 283

Query: 66  RSEWVLCIDGLVM---SRSAETINANIITGQIELSAQKIEILSVAEELPLPV-------- 114
            +E V+ + G++    ++  E + A I   ++ + A  +E  +V E LP  V        
Sbjct: 284 DAETVVLVKGILQEPKAKQGEVLGATIHDVEVSVHAMHVEA-AVTENLPFNVNEAEVSKA 342

Query: 115 -----FGEREYPES---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN 160
                  + E+ E           R   R +DLR          ++ I +  R ++ +E 
Sbjct: 343 EVDAELAKSEHKEGHSRVRISDRTRLTNRVIDLRTTASQGIFRIQSGICSLFRAQLDSEG 402

Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
           FIE  TP L   + E            +G+F A  Q+PQ  KQ+ +++ F + ++I   F
Sbjct: 403 FIEIHTPKLQGGATESGASVFKIDYFGRGAFLA--QSPQLAKQMAISADFGKVYEIGAVF 460

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
           R E+  + R   E+  LD+EM   E   ++L  ++   + +F+
Sbjct: 461 RAENSNTYRHLTEYTGLDLEMQIDEHYHEVLRVLDRTFKAIFK 503


>gi|289740395|gb|ADD18945.1| asparaginyl-tRNA synthetase [Glossina morsitans morsitans]
          Length = 558

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 125/287 (43%), Gaps = 23/287 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G+ + G  +R+ GWVHR+R  G G+IF+ +RD  G  Q V          A ++ +E  +
Sbjct: 130 GLDNRGKRIRIYGWVHRLRRQGKGLIFITLRDGTGFLQCVLTDRLCQTYDALTLTTESSV 189

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRF 130
            + G++     +        G  EL     E++ +A       +  E  +P+ ++   R 
Sbjct: 190 QLFGIL----KQVPEGKSAPGGHELHVDYWELIGLAPAGGAESILNEEAHPD-VQLDNRH 244

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           + +R +   K +  R+ ++ + R       + E + P L  +  EG          ++ +
Sbjct: 245 IMIRGENTSKVLKMRSVVMQAFRGHYFDRGYCEVTPPTLVQTQVEGGSTLFKLQYFSEEA 304

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  D++L
Sbjct: 305 Y--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHIEAECPFITFDELL 361

Query: 251 NTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAIR 284
           + +E+        VL+      V+E   +       F R+ Y DAI+
Sbjct: 362 DRLEDLVCDVVDRVLKSTWGDVVYELNPDFKPPKKPFKRMNYADAIK 408



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R + +E +L+ +   GI  +     +    RA+  G  PHGG   G+
Sbjct: 475 LLPNVGEIVGGSMRIYDNEDLLRGYKREGIDPKPY--YWYTDQRAY--GTQPHGGYGLGL 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R++  LL   ++REV L+P   + C
Sbjct: 531 ERLLCWLLNRYHIREVCLYPRFLDRC 556


>gi|240949401|ref|ZP_04753742.1| lysyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240296150|gb|EER46806.1| lysyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 501

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 21/279 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V+++G +   R  G   F  I+D  G  Q+    D+    +A+ V S+ V   D G ++ 
Sbjct: 64  VKVAGRIMLKRVMGKASFFTIQDVSGQIQLYVARDN----LAEGVYSDKVSLWDLGDIVG 119

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138
            S         TG++ +   ++E+L+ +   PLP   +    + IR++ R+LDL   +  
Sbjct: 120 VSGTLFKTK--TGELTVRCSEVELLTKSLR-PLPNKVQGITDQEIRYRQRYLDLISNEES 176

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            +  + R+++++ +R   +   FIE  TP+L        AR F+          Y L  A
Sbjct: 177 RRTFMIRSQVVSGIRQFFLERGFIEVETPMLQVIPGGAAARPFVTHHNALDVDMY-LRIA 235

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E       P EF  ++   ++ +  D+++  E +L
Sbjct: 236 PELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELL 294

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
           R +  +      V            F RI   +AI +YG
Sbjct: 295 RKLALDILGTTDVPYGEYVFDFGKPFERITMHEAIVKYG 333



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M+   A ++R+V LFP
Sbjct: 460 ALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILFP 495


>gi|222152138|ref|YP_002561298.1| lysyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222121267|dbj|BAH18602.1| lysyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 495

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 131/285 (45%), Gaps = 19/285 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKS 64
           S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D+     F++  S
Sbjct: 48  SKEELHDKEAESHVAIAGRIMTKRGKGKAGFAHVKDLEGQIQIYVRKDAVGDEQFDLWNS 107

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123
                ++ ++G++   +         TG++ + A    +L+ A   LP    G ++  + 
Sbjct: 108 ADLGDIVGVEGVMFKTN---------TGELSVKATSFTMLAKALRPLPDKFHGLQDIEQ- 157

Query: 124 IRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
            R++ R+LDL   D   +  + R++II  MR  + A+ F+E  TP++ T +    AR F+
Sbjct: 158 -RYRQRYLDLITSDESTQTFITRSKIIQEMRSYLNAKGFLEVETPMMHTIAGGAAARPFV 216

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  
Sbjct: 217 THHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP-EFTMIELYE 274

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           ++ + +DI++  E ++  + E+ +   TV+ +   I      RR+
Sbjct: 275 AYADYNDIMDLTEEMVAYIAEKVTGSTTVTYDGEEIQLAPKWRRW 319



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVLLFP 490


>gi|39575142|emb|CAE78983.1| asparaginyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
          Length = 514

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 130/305 (42%), Gaps = 53/305 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V LSGWV ++R      F+++ D   +   QVV + + A F ++A    S  VL    +V
Sbjct: 72  VYLSGWVRKIRDQKNFGFIELNDGTFFKGVQVVFDNNLANFADVAALSISSSVLVTGKVV 131

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            S+ A         GQ  E+ A KIEI+  A+ L  P+  +R   E +R +   L  R +
Sbjct: 132 KSQGA---------GQSFEVMASKIEIVQKAD-LEYPLQNKRHSMEFLR-EIAHLRPRTN 180

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL--------VPSRVNQ 188
           T       R+ +  ++      +NF+  +TPI+T S  EGA +           P R   
Sbjct: 181 TFSAVFRVRSVLAYAIHKFFNEQNFVYVNTPIITGSDAEGAGEMFRVTTLKLDKPPRKED 240

Query: 189 GSFYALPQAPQQYKQLLMA---------SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           GS  A      +   L ++         + F   +   P FR E+  + R   EF+ ++ 
Sbjct: 241 GSIDASQDFFGKETNLTVSGQLNGETFCAAFRNIYTFGPTFRAENSNTSRHAAEFWMIEP 300

Query: 240 EMSFVEQDDILNTMEN----VLRGVFE------EFSN-----------GNTVSNNFLRIC 278
           E++F +    +   E+    ++R V E      EF N            N ++NNF R+ 
Sbjct: 301 EIAFADLTANMELAEDMIKYIIRYVMEQCPEEMEFFNQFVEKGLFDKLNNVLNNNFGRVT 360

Query: 279 YDDAI 283
           Y +AI
Sbjct: 361 YTEAI 365


>gi|331083387|ref|ZP_08332499.1| hypothetical protein HMPREF0992_01423 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330404080|gb|EGG83628.1| hypothetical protein HMPREF0992_01423 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 650

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 30/286 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V L+G +   R  G   F  I+D  G  Q     D+   +  K  +   +  I G+ 
Sbjct: 58  GKSVSLAGRMMSKRVMGKASFCSIQDVQGSIQSYVARDNIGEDHYKDFKKMDIGDIVGI- 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                E       TG+I + A ++ +LS + + PLP          +R++ R++DL  + 
Sbjct: 117 ---KGEVFKTK--TGEISIHATEVTLLSKSLK-PLPEKFHGLTNTDLRYRQRYVDLIMNA 170

Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +    +KR++II S+R  +  + F+E  TP+L A++   A      +R  +  F AL +
Sbjct: 171 DVKDTFIKRSKIIASIRNYLNGQGFLEVETPMLVANAGGAA------ARPFETHFNALDE 224

Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                 + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   ++
Sbjct: 225 DFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYHGMM 283

Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           +  EN+ R V +E      +  N         F RI   DA+++Y 
Sbjct: 284 DLTENLYRHVAQEVLGTTKIVYNGIEMDLGKPFERITMVDAVKKYA 329



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GM P GGI  GIDR+VMLL  +  +R+V LFP
Sbjct: 455 ALEIGMAPTGGIGFGIDRMVMLLTDSAAIRDVLLFP 490


>gi|327310573|ref|YP_004337470.1| asparaginyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947052|gb|AEA12158.1| asparaginyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 431

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 116/280 (41%), Gaps = 30/280 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + GWV+R R     IF+ +RD  GI Q+V    +  F +A+ +  E  L   GL+   
Sbjct: 19  VTVRGWVYRKRELKDKIFIVLRDSTGILQLVFARGTEAFNVAQRLNLESSLVATGLIKEE 78

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES-IRFKYRFLDLRRDTLH 139
                      G  EL  Q ++     E  P P+  +    +S      R L LR   + 
Sbjct: 79  PR-------APGGKELHVQSVDWYY--EGAPYPINEDAAQADSEYLLDVRHLWLRSRKMQ 129

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQAP 198
             +  R  +  ++     +  + E   P+ +TA+   GA  F VP          L Q+ 
Sbjct: 130 AVLKIRHTVFGAIHEYFRSRGYYEVQGPMFITAAVEGGATLFKVP---YFDDVVYLTQSS 186

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME---- 254
           Q Y +  + S  ++ + IAP FR E  R+ R   EF+  + EM++   DD++   E    
Sbjct: 187 QFYLEAFIFS-LEKVYTIAPSFRAEPSRTRRHLTEFWHAEAEMAWYHLDDLMKVNEELIS 245

Query: 255 NVLRGVFEEFSNG-----------NTVSNNFLRICYDDAI 283
           +++  V EE  +              V   F R+ YD+A+
Sbjct: 246 HIVSKVLEERLDELKLLGRKTEPLEAVKPPFYRVSYDEAV 285


>gi|298370419|ref|ZP_06981735.1| lysine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281879|gb|EFI23368.1| lysine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 503

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 125/282 (44%), Gaps = 30/282 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  I+D  G  Q+  N      E+     + W L   G ++  
Sbjct: 68  VKIAGRMMLKRQMGKASFATIQDMSGQIQLYLNNKGVSQEVLDDF-NHWDL---GDIVGA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----RR 135
                  N   G++ +    I +LS +   PLP   +    + ++++ R++DL      R
Sbjct: 124 EGTLFKTN--HGELTVRVSAIRLLSKSLR-PLPDKHKGLADQEVKYRQRYVDLIVNPESR 180

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
           DT     +KR++II ++R  M++E ++E  TP++    P G  A+ F+          Y 
Sbjct: 181 DTF----IKRSKIIQTVRNYMVSEGYLEVETPMM-HPIPGGATAKPFITHHNALDMPLY- 234

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F   + ++   
Sbjct: 235 LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSTRHNPEFTMMEFYEAFCTYERMMEMT 293

Query: 254 ENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           E V+R   E       +S N         F R+   +AI++Y
Sbjct: 294 EGVIRACAETVCGAAKISCNGKEVDLASPFERLTILEAIKKY 335



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   G+DR+VMLL  ++ +R+V LFP
Sbjct: 462 RAMEYGLPPTGGSGIGLDRLVMLLTDSQTIRDVILFP 498


>gi|168206860|ref|ZP_02632865.1| lysyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168211213|ref|ZP_02636838.1| lysyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170661760|gb|EDT14443.1| lysyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170710776|gb|EDT22958.1| lysyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 647

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 132/292 (45%), Gaps = 26/292 (8%)

Query: 5   RTHSCGDLGVSD-----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           RTHS  D  V D      G  V+++G +   R  G ++F D+ D  G  Q+    D+   
Sbjct: 44  RTHSSAD--VKDNFEELEGKEVKVAGRLMSKRGQGKVVFADLADLPGKIQLFIKIDNVGE 101

Query: 60  EIAKSVRS----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           E  K  ++    +WV     +  ++  E    ++     EL  + ++        PLP  
Sbjct: 102 EALKEFKTFDLGDWVAATGEVFKTKMGEV---SVKVTSFELICKSLK--------PLPEK 150

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R +D+  +   K+  +KR++I+ ++R  +    F+E  TPIL+  + 
Sbjct: 151 WHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAG 210

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+ +GF++ +++   FR+E   S R   E
Sbjct: 211 GAAARPFITHHNALDIDMY-LRIATELYLKRLIVAGFEKVYEMGKNFRNEGV-SVRHNPE 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           F  +++  ++ + +D++  MEN++  V E+ +    V+     I +    RR
Sbjct: 269 FTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWRR 320



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M L  + ++R+V LFP
Sbjct: 460 ALETGMPPTGGLGIGIDRMIMFLTDSSSIRDVILFP 495


>gi|311087328|gb|ADP67408.1| lysyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon
           pisum)]
          Length = 506

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 124/266 (46%), Gaps = 22/266 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y+T +  +L   ++   V ++G + + R  G   F  ++D  G  Q+  N      + 
Sbjct: 51  QKYQTKNRNELISLNIE--VSIAGRMVQRRIMGKASFFTLQDIEGKIQIYINEKKISSDF 108

Query: 62  AKSVRSEW----VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            +    +W    +L + G +             TG++ +  + + IL+ + + PLP    
Sbjct: 109 YRFHFKKWDIGDILGVIGTLFKTK---------TGELSIYCKNVTILNKSLK-PLPDKFH 158

Query: 118 REYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
               + IR++ R+LDL   + L+     R+ II ++R  MI  +F+E  TP+L  + P G
Sbjct: 159 GLSNQEIRYRKRYLDLISNNKLYSIFKNRSNIITAIRNFMIENDFLEVETPML-QNIPGG 217

Query: 177 A--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           A  R F+          Y L  AP+ Y + L+  GF+R F++   FR+E   +   P EF
Sbjct: 218 ANARPFITYHNEIDSQMY-LRIAPELYLKKLIIGGFERIFELNRNFRNEGVSARHNP-EF 275

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGV 260
             ++  +++   +D++   EN+ + +
Sbjct: 276 TMMEAYIAYSNYEDMMELTENLFKNI 301



 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-----RAFQCGMPP 535
           +++L   G+EI +G    +  E     F N  I K   E+     Y      A + G+PP
Sbjct: 413 RFELFIGGYEIGNGFSELNDVEDQKTRFLN-QIQKSNKEDNKNLFYDKEYIEALKYGLPP 471

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             G+  GIDR++M+L    ++R+V LFP  + F
Sbjct: 472 TSGLGIGIDRLIMILTNQISIRDVILFPTLRPF 504


>gi|37361912|gb|AAQ91069.1| LRRGT00113 [Rattus norvegicus]
          Length = 496

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 121/301 (40%), Gaps = 42/301 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 73  GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 119

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 120 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 179

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ I    R       + E +TP L  +  EG           
Sbjct: 180 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 239

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   EF  ++ E  F+  +
Sbjct: 240 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 296

Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI---RRYGTDKP 291
           D+L+ +E+        VL+      V++   N       F R+ Y DAI   R +   K 
Sbjct: 297 DLLSRLEDLVCDVVDRVLKSPVASIVYDLNPNFKAPKRPFRRMNYSDAIEWLREHDVKKE 356

Query: 292 D 292
           D
Sbjct: 357 D 357



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 413 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 468

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  +L   ++R+V L+P     C
Sbjct: 469 ERFLSWILNRYHIRDVCLYPRFLQRC 494


>gi|219682343|ref|YP_002468727.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|219622076|gb|ACL30232.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|311086168|gb|ADP66250.1| lysyl-tRNA synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon
           pisum)]
 gi|311086740|gb|ADP66821.1| lysyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 506

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 124/266 (46%), Gaps = 22/266 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y+T +  +L   ++   V ++G + + R  G   F  ++D  G  Q+  N      + 
Sbjct: 51  QKYQTKNRNELISLNIE--VSIAGRMVQRRIMGKASFFTLQDIEGKIQIYINEKKISSDF 108

Query: 62  AKSVRSEW----VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            +    +W    +L + G +             TG++ +  + + IL+ + + PLP    
Sbjct: 109 YRFHFKKWDIGDILGVIGTLFKTK---------TGELSIYCKNVTILNKSLK-PLPDKFH 158

Query: 118 REYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
               + IR++ R+LDL   + L+     R+ II ++R  MI  +F+E  TP+L  + P G
Sbjct: 159 GLSNQEIRYRKRYLDLISNNKLYSIFKNRSNIITAIRNFMIENDFLEVETPML-QNIPGG 217

Query: 177 A--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           A  R F+          Y L  AP+ Y + L+  GF+R F++   FR+E   +   P EF
Sbjct: 218 ANARPFITYHNEIDSQMY-LRIAPELYLKKLIIGGFERIFELNRNFRNEGVSARHNP-EF 275

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGV 260
             ++  +++   +D++   EN+ + +
Sbjct: 276 TMMEAYIAYSNYEDMMELTENLFKSI 301



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 6/93 (6%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-----RAFQCGMPP 535
           +++L   G+EI +G    +  E     F N  I K   E+     Y      A Q G+PP
Sbjct: 413 RFELFIGGYEIGNGFSELNDVEDQKTRFLN-QIQKSNKEDNKNLFYDKEYIEALQYGLPP 471

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             G+  GIDR++M+L    ++R+V LFP  + F
Sbjct: 472 TSGLGIGIDRLIMILTNQISIRDVILFPTLRPF 504


>gi|89257151|ref|YP_514513.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|167011048|ref|ZP_02275979.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254368375|ref|ZP_04984393.1| lysyl-tRNA ligase [Francisella tularensis subsp. holarctica 257]
 gi|290954113|ref|ZP_06558734.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295312498|ref|ZP_06803266.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89144982|emb|CAJ80342.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|134254183|gb|EBA53277.1| lysyl-tRNA ligase [Francisella tularensis subsp. holarctica 257]
          Length = 560

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV       PD   
Sbjct: 106 RYTDKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 164

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +E  K+      LC  G ++  +      N  TG++ + A   EIL+ A   PLP     
Sbjct: 165 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 215

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++        
Sbjct: 216 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAA 275

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F           Y L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  
Sbjct: 276 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGISSRHNP-EFTM 333

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287
           L+  M++ + +D+++  E++L  + +E      +            + RI   D+I +Y 
Sbjct: 334 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 393

Query: 288 TD--KPDL 293
            D  K DL
Sbjct: 394 DDITKEDL 401



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VM L  ++++R+V LFP
Sbjct: 519 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 555


>gi|207110007|ref|ZP_03244169.1| aspartyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 98

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 53/72 (73%), Gaps = 3/72 (4%)

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           ED R+DR P EF Q+D EMSF +++D++  +E++L+ +F+  + G+T+S  F R+ Y +A
Sbjct: 1   EDLRADRQP-EFTQIDAEMSFCDENDVMGVVEDLLQEIFK--AIGHTISTPFKRMPYKEA 57

Query: 283 IRRYGTDKPDLR 294
           +  YG+DKPDLR
Sbjct: 58  MENYGSDKPDLR 69


>gi|328676242|gb|AEB27112.1| Lysyl-tRNA synthetase (class II) [Francisella cf. novicida Fx1]
          Length = 560

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 29/308 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSAC 58
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV       PD   
Sbjct: 106 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPD-GQ 164

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +E  K+      LC  G ++  +      N  TG++ + A   EIL+ A   PLP     
Sbjct: 165 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHG 215

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++        
Sbjct: 216 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAA 275

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F           Y L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  
Sbjct: 276 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTM 333

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287
           L+  M++ + +D+++  E++L  + +E      +            + RI   D+I +Y 
Sbjct: 334 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 393

Query: 288 TD--KPDL 293
            D  K DL
Sbjct: 394 DDITKEDL 401



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VM L  ++++R+V LFP
Sbjct: 519 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 555


>gi|323188712|gb|EFZ73997.1| lysyl-tRNA synthetase [Escherichia coli RN587/1]
          Length = 505

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLLEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
            + ++      V+           F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|217965685|ref|YP_002351363.1| lysyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|217334955|gb|ACK40749.1| lysyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307569767|emb|CAR82946.1| lysyl-tRNA synthetase [Listeria monocytogenes L99]
          Length = 498

 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 49/358 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F  I+D +   Q+    D+    I +   + + L   G ++  
Sbjct: 63  VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKLADLGDIIGI 118

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                  N  TG++ + A +  +LS +   LP    G ++  +  R++ R+LDL  +   
Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           +N  V R++I+   R  M ++ F+E  TP+L T +    A+ F+          Y L  A
Sbjct: 175 QNRFVMRSKILKYTRDYMDSQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D++N +E ++
Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMNLVEGLV 292

Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD---------------KP 291
             V ++  NG T          ++ N+ RI   DA++ Y G D               K 
Sbjct: 293 STVCKQV-NGTTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEARELAKKH 351

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343
           D+  P+  H    H ++  F    +   + P + V+  P      AK    +  F DR
Sbjct: 352 DV--PVTEHMTYGHILNEFFETHVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG+  G+DR+VMLL  A ++R++ LFP  ++
Sbjct: 457 ALEYGLPPTGGLGIGVDRLVMLLTNAPSIRDILLFPTMKH 496


>gi|153940179|ref|YP_001392873.1| lysyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|168180988|ref|ZP_02615652.1| lysyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|170757532|ref|YP_001783159.1| lysyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|189082955|sp|A7GJB3|SYK_CLOBL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|229559856|sp|B1IGJ2|SYK_CLOBK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|152936075|gb|ABS41573.1| lysine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|169122744|gb|ACA46580.1| lysyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|182668060|gb|EDT80039.1| lysyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|295320850|gb|ADG01228.1| lysine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 504

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 79/330 (23%), Positives = 140/330 (42%), Gaps = 39/330 (11%)

Query: 5   RTHSCGDL--GVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++     D+ G  V ++G +   R HG   F DI D YG  Q+    +    E 
Sbjct: 44  RTHTSKEVKDNYEDLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103

Query: 62  AKSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            K  ++     ++ + G V        + +I   Q+   + +          PLP     
Sbjct: 104 LKEYKTFDIGDIISVTGTVFKTKTGETSIHITDFQLVCKSLR----------PLPEKWHG 153

Query: 119 EYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                +R++ R++DL      RDT     +KRT II SMR  +    F+E  TPIL+  +
Sbjct: 154 LKDPDLRYRQRYVDLIINQDVRDTF----IKRTAIIKSMREFLDNRGFLEVETPILSPIA 209

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+          Y L  A + Y + L+  GF++ ++I   FR+E       P 
Sbjct: 210 GGAAAKPFITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283
           EF  +++  ++ + +D++   EN++  + E+      V            + R+   DA+
Sbjct: 268 EFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEIDFTPPWRRLTMVDAV 327

Query: 284 RRY-GTDKPDLRNPIIMHNVTEHFVHSEFR 312
           + Y G D   ++N I    + +   H EF+
Sbjct: 328 KEYAGVDFNIIKNDIEARTIAKE-KHIEFK 356



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + GMPP GG+  GIDR++M L    ++R+V LFP
Sbjct: 460 SLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFP 495


>gi|182626013|ref|ZP_02953776.1| lysyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|177908720|gb|EDT71231.1| lysyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 647

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 132/292 (45%), Gaps = 26/292 (8%)

Query: 5   RTHSCGDLGVSD-----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           RTHS  D  V D      G  V+++G +   R  G ++F D+ D  G  Q+    D+   
Sbjct: 44  RTHSSAD--VKDNFEELEGKEVKVAGRLMSKRGQGKVVFADLADLPGKIQLFIKIDNVGE 101

Query: 60  EIAKSVRS----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           E  K  ++    +WV     +  ++  E    ++     EL  + ++        PLP  
Sbjct: 102 EALKEFKTFDLGDWVAATGEVFKTKMGEV---SVKVTSFELICKSLK--------PLPEK 150

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R +D+  +   K+  +KR++I+ ++R  +    F+E  TPIL+  + 
Sbjct: 151 WHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAG 210

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+ +GF++ +++   FR+E   S R   E
Sbjct: 211 GAAARPFITHHNALDIDMY-LRIATELYLKRLIVAGFEKVYEMGKNFRNEGV-SVRHNPE 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           F  +++  ++ + +D++  MEN++  V E+ +    V+     I +    RR
Sbjct: 269 FTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWRR 320



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M L  + ++R+V LFP
Sbjct: 460 ALETGMPPTGGLGIGIDRMIMFLTDSSSIRDVILFP 495


>gi|145229355|ref|XP_001388986.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS
           513.88]
 gi|134055090|emb|CAK43730.1| unnamed protein product [Aspergillus niger]
          Length = 952

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 12/188 (6%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSM 152
           +  S  + EI +  EE    + G R + P+ +R   R LDLR  T       ++ I N  
Sbjct: 241 VPFSIYEAEIQTAEEER---IEGRRSHIPDRVRLTNRLLDLRTPTSQSIFRIQSAICNLF 297

Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
           R  +  + F+E  TP L  S+ E            + +F A  Q+PQ  KQ+ +A+ F R
Sbjct: 298 RFALDEQGFMEIHTPKLQGSATESGASVFHVQYFGRDAFLA--QSPQLAKQMAIAADFGR 355

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMS----FVEQDDILNT-MENVLRGVFEEFSNG 267
            ++I   FR E+  + R   E+  LD+EM+    + E  D+L+  ++++L+GV+  +   
Sbjct: 356 VYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEMLDVLDAVIKSILQGVYGRYRRE 415

Query: 268 -NTVSNNF 274
             TV + F
Sbjct: 416 VETVKHQF 423



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H   ++ +     GI  + +E+   G    F+ G PPH G   
Sbjct: 513 FDIFVRGQEIVSGGQRIHDPHMLEENMRRSGIDPDTMEDYMEG----FRWGAPPHAGAGV 568

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++MLLL   N+R  SLFP
Sbjct: 569 GLERLLMLLLKLGNIRLASLFP 590


>gi|257215916|emb|CAX83110.1| lysyl-tRNA synthetase [Schistosoma japonicum]
          Length = 364

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 128/268 (47%), Gaps = 15/268 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACF 59
           + +Y + S G+  ++D+   V +SG VH  R  G  +IF DIR      QV+AN      
Sbjct: 70  IEKYSSLSPGE-HLNDIS--VSISGRVHAKRSAGSKLIFYDIRSEDCQLQVMANIRHYKS 126

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGER 118
           E      +E +   D +  + S          G++ +   +I +LS    +LP   +G +
Sbjct: 127 EAEFHAINEVIHLGDIIGCAGSP----GKSKLGELSIIPHEITLLSPCLYQLPHMHYGVK 182

Query: 119 EYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
           +  +  RF+ R+LDL   + + +  + R RI+N +R  +    F+E  TP++ T +    
Sbjct: 183 D--KETRFRQRYLDLLMNEEVRRRFITRARIVNYVRKFLDDLGFLEVETPMMNTIAGGAA 240

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F+        + Y +  AP+ Y ++L+  G +R +++   FR+E       P EF  
Sbjct: 241 AKPFITYHNELNMNLY-MRVAPELYLKMLVIGGLNRVYELGRVFRNEGIDLTHNP-EFTS 298

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEF 264
            +  M++ + +D++   E++L G+ +  
Sbjct: 299 CEFYMAYADYEDLMTITEDLLSGLVKHL 326


>gi|251792905|ref|YP_003007631.1| lysyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534298|gb|ACS97544.1| lysyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 502

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 124/285 (43%), Gaps = 27/285 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V ++G +   R  G   F+ ++D  G  Q+    D+    + K     W    ++ + G 
Sbjct: 64  VAVAGRIMTRRAMGKATFITLQDMSGRIQLYVARDNLPEGVYKEDVGAWDLGDIVGVKGT 123

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           +             T ++ + A ++++L+ A   PLP        + +R++ R+LDL   
Sbjct: 124 LFKTK---------TNELTVKATEVQLLTKALR-PLPNKFHGLTDQEVRYRQRYLDLIAN 173

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
           +   +  + R++++  +R   I++ F+E  TP+L        AR F+          Y L
Sbjct: 174 EDSRRTFMIRSQVVAGIREYFISKGFMEVETPMLQVIPGGAAARPFVTHHNALDVDMY-L 232

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+++  E
Sbjct: 233 RIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNTE 291

Query: 255 NVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
            +LR +  +      V            F RI   DA  +YG +K
Sbjct: 292 ELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGAEK 336



 Score = 40.4 bits (93), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|222095813|ref|YP_002529870.1| aspartyl-tRNA synthetase [Bacillus cereus Q1]
 gi|221239871|gb|ACM12581.1| aspartyl-trna synthetase [Bacillus cereus Q1]
          Length = 385

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 91/186 (48%), Gaps = 4/186 (2%)

Query: 94  IELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSM 152
           IE+ A +++IL+ AE LP  +  ++ +         R L LR + +      ++  ++S 
Sbjct: 36  IEVLAHEVKILNGAEPLPFEINKKKLQVGLDQLLNERVLSLRHERIAAIFKVKSTFVHSF 95

Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
              +   +F    TP + +   EG  +        + ++ A  Q+PQ YKQ+++A G +R
Sbjct: 96  SEFLAENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAYLA--QSPQFYKQMMVAGGLER 153

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVS 271
            F+IAP +R E   S R   E+  LD+E+ F+    +++    +VL+ +F++ +      
Sbjct: 154 VFEIAPVYRAEHHNSSRHLNEYISLDVEIGFINDFHEVMQLETDVLQYMFQQVAKNCEKE 213

Query: 272 NNFLRI 277
              L+I
Sbjct: 214 LQLLQI 219



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ G PPHGG   
Sbjct: 300 FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGCPPHGGFGI 355

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V  LL   NVRE S FP
Sbjct: 356 GLERVVCKLLELTNVREASAFP 377


>gi|15617036|ref|NP_240249.1| lysyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219681788|ref|YP_002468174.1| lysyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471490|ref|ZP_05635489.1| lysyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon
           pisum)]
 gi|11134965|sp|P57512|SYK_BUCAI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|25293056|pir||G84980 lysine-tRNA ligase (EC 6.1.1.6) [imported] - Buchnera sp.  (strain
           APS)
 gi|10039101|dbj|BAB13135.1| lysyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219624631|gb|ACL30786.1| lysyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
          Length = 506

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 124/266 (46%), Gaps = 22/266 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y+T +  +L   ++   V ++G + + R  G   F  ++D  G  Q+  N      + 
Sbjct: 51  QKYQTKNRNELISLNIE--VSIAGRMVQRRIMGKASFFTLQDIEGKIQIYINEKKISSDF 108

Query: 62  AKSVRSEW----VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            +    +W    +L + G +             TG++ +  + + IL+ + + PLP    
Sbjct: 109 YRFHFKKWDIGDILGVIGTLFKTK---------TGELSIYCKNVTILNKSLK-PLPDKFH 158

Query: 118 REYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
               + IR++ R+LDL   + L+     R+ II ++R  MI  +F+E  TP+L  + P G
Sbjct: 159 GLSNQEIRYRKRYLDLISNNKLYSIFKNRSNIITAIRNFMIENDFLEVETPML-QNIPGG 217

Query: 177 A--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           A  R F+          Y L  AP+ Y + L+  GF+R F++   FR+E   +   P EF
Sbjct: 218 ANARPFITYHNEIDSQMY-LRIAPELYLKKLIIGGFERIFELNRNFRNEGVSARHNP-EF 275

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGV 260
             ++  +++   +D++   EN+ + +
Sbjct: 276 TMMEAYIAYSNYEDMMELTENLFKSI 301



 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-----RAFQCGMPP 535
           +++L   G+EI +G    +  E     F N  I K   E+     Y      A + G+PP
Sbjct: 413 RFELFIGGYEIGNGFSELNDVEDQKTRFLN-QIQKSNKEDNKNLFYDKEYIEALKYGLPP 471

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             G+  GIDR++M+L    ++R+V LFP  + F
Sbjct: 472 TSGLGIGIDRLIMILTNQISIRDVILFPTLRPF 504


>gi|322695409|gb|EFY87218.1| aspartate-tRNA ligase [Metarhizium acridum CQMa 102]
          Length = 913

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 122/266 (45%), Gaps = 14/266 (5%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ-VVANPDSACF 59
           H Y  +   +L    +G+ V     +   R     + FL  RD     Q V++       
Sbjct: 144 HPYELNPIAELDKLPLGTEVNFRARISTQRQLSKNLDFLLFRDQTNTVQGVLSREYLDMV 203

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              + + SE ++ ++G V+    E + +   +G +E+    I +++ A+  P   F   +
Sbjct: 204 RWVQKLNSESLVQVNG-VLKAPPEAVRSATHSG-VEVEVHSIHLVNAAQGAP---FTNYK 258

Query: 120 YPESIRFKY--RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            PE++R +   R LDLR  +       R+ +    R  +  + F+E +TP L  ++ E  
Sbjct: 259 PPETLRNRMTSRILDLRHPSNQALFRIRSMVTRIFRDTLEQQGFVEINTPKLQPAATESG 318

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                 +   + +F A  Q+PQ  KQ  +++ F R +++ P FR E+  + R   E+  L
Sbjct: 319 AAVFKVNYFGRNAFLA--QSPQLAKQSAVSADFGRVYEVGPVFRAENSNTHRHLTEYTGL 376

Query: 238 DMEMSFVEQD--DILNTMENVLRGVF 261
           D+EMS +E D  +++  ++  L+ VF
Sbjct: 377 DIEMS-IEHDYHEVICIIDEFLKNVF 401



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H +  + +    VGIS++ +E+       AF  G PPH G   
Sbjct: 500 FDIFIRGQEICSGGQRIHDAAELRENMQAVGISEDGMEDYLA----AFDLGAPPHAGAGL 555

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++RIV  +L   +VR  SLF
Sbjct: 556 GLERIVAWMLELGDVRYASLF 576


>gi|281492440|ref|YP_003354420.1| asparaginyl-tRNa synthetase [Lactococcus lactis subsp. lactis
           KF147]
 gi|281376104|gb|ADA65595.1| Asparaginyl-tRNA synthetase [Lactococcus lactis subsp. lactis
           KF147]
          Length = 447

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 115/295 (38%), Gaps = 42/295 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  WV      G + FL +RD     Q VV  P+          +A F+  K +
Sbjct: 14  VGETVKIGAWVADKSGKGKLQFLQLRDGTAFFQAVVFKPNMIENFGEEEGTAKFDEIKHL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V   S             EL    +E++  + + P+     +E+     
Sbjct: 74  SQETSVYVTGVVKEDSRSKFG-------YELDVTDLEVIGQSHDYPIT---PKEHGVEFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E   +      
Sbjct: 124 LDNRHLWLRSKRQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILSGNAAENTTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
               +F  L Q+ Q Y +   MA G  R F   P FR E  ++ R   EF+ +D E  FV
Sbjct: 184 FGNSAF--LSQSGQLYLEAGAMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYPFV 239

Query: 245 EQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
             D+ L+  E     +++GV +  +                +   F R+ YDDAI
Sbjct: 240 THDESLDIQEAYVKALIQGVLDNAAYALETLERDTSMLQKYIDTPFKRVSYDDAI 294


>gi|16766341|ref|NP_461956.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56414986|ref|YP_152061.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62181550|ref|YP_217967.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161615987|ref|YP_001589952.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167550076|ref|ZP_02343833.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167994103|ref|ZP_02575195.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168231145|ref|ZP_02656203.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168236099|ref|ZP_02661157.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168242827|ref|ZP_02667759.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168261798|ref|ZP_02683771.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168463792|ref|ZP_02697709.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168823069|ref|ZP_02835069.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194443381|ref|YP_002042292.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194450411|ref|YP_002047025.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194471972|ref|ZP_03077956.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194472758|ref|ZP_03078742.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194736687|ref|YP_002115990.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197250263|ref|YP_002147953.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197265303|ref|ZP_03165377.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197363915|ref|YP_002143552.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|198242473|ref|YP_002217018.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|200387283|ref|ZP_03213895.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204928085|ref|ZP_03219285.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205353964|ref|YP_002227765.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207858303|ref|YP_002244954.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|213161325|ref|ZP_03347035.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
 gi|213425819|ref|ZP_03358569.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|213583165|ref|ZP_03364991.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
 gi|238909839|ref|ZP_04653676.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|17865728|sp|P28354|SYK1_SALTY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|75481018|sp|Q57K76|SYK_SALCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81361439|sp|Q5PL30|SYK_SALPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189082967|sp|A9N3L6|SYK_SALPB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710925|sp|B5F5G4|SYK_SALA4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710926|sp|B5FUF3|SYK_SALDC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710927|sp|B5QXG7|SYK_SALEP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710928|sp|B5RE01|SYK_SALG2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710929|sp|B4T535|SYK_SALNS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238690649|sp|B4TGW0|SYK_SALHS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238690720|sp|B5BFK5|SYK_SALPK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238693697|sp|B4TUQ8|SYK_SALSV RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|16421590|gb|AAL21915.1| constitutive lysine tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56129243|gb|AAV78749.1| lysyl tRNA synthetase (LysRS) [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62129183|gb|AAX66886.1| lysine tRNA synthetase, constitutive [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161365351|gb|ABX69119.1| hypothetical protein SPAB_03787 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402044|gb|ACF62266.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194408715|gb|ACF68934.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194458336|gb|EDX47175.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194459122|gb|EDX47961.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194712189|gb|ACF91410.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195633136|gb|EDX51550.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197095392|emb|CAR60951.1| lysyl tRNA synthetase (LysRS) [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197213966|gb|ACH51363.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197243558|gb|EDY26178.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197290865|gb|EDY30219.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197936989|gb|ACH74322.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199604381|gb|EDZ02926.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204322407|gb|EDZ07604.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205273745|emb|CAR38740.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205324787|gb|EDZ12626.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205328003|gb|EDZ14767.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205334471|gb|EDZ21235.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205338151|gb|EDZ24915.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205340632|gb|EDZ27396.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205349204|gb|EDZ35835.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206710106|emb|CAR34461.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|261248172|emb|CBG26008.1| LysRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267995194|gb|ACY90079.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301159596|emb|CBW19115.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312914061|dbj|BAJ38035.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|320087469|emb|CBY97234.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|321225715|gb|EFX50769.1| Lysyl-tRNA synthetase class II [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322613438|gb|EFY10379.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322621030|gb|EFY17888.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322624094|gb|EFY20928.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322628167|gb|EFY24956.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322633286|gb|EFY30028.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322636136|gb|EFY32844.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322639475|gb|EFY36163.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322647593|gb|EFY44082.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322648777|gb|EFY45224.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322653832|gb|EFY50158.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322657938|gb|EFY54206.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322664041|gb|EFY60240.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322668948|gb|EFY65099.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322673058|gb|EFY69165.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322677951|gb|EFY74014.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322681127|gb|EFY77160.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322687943|gb|EFY83910.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|322716031|gb|EFZ07602.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323131396|gb|ADX18826.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|323194861|gb|EFZ80048.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323196612|gb|EFZ81760.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323202688|gb|EFZ87728.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323207825|gb|EFZ92771.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323212623|gb|EFZ97440.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323214894|gb|EFZ99642.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323222625|gb|EGA06990.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323225096|gb|EGA09348.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323230618|gb|EGA14736.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323235031|gb|EGA19117.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323239070|gb|EGA23120.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323244572|gb|EGA28578.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323247187|gb|EGA31153.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323253330|gb|EGA37159.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323256363|gb|EGA40099.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323262461|gb|EGA46017.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323267443|gb|EGA50927.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323269153|gb|EGA52608.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
 gi|326624785|gb|EGE31130.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
 gi|326629078|gb|EGE35421.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
 gi|332989907|gb|AEF08890.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 505

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 130/289 (44%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  K R++I+  +R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 NTFKTRSKILAGIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295
           R + ++      V            F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQDVLGTTQVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|322807845|emb|CBZ05420.1| lysyl-tRNA synthetase (class II) [Clostridium botulinum H04402 065]
          Length = 504

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 79/330 (23%), Positives = 140/330 (42%), Gaps = 39/330 (11%)

Query: 5   RTHSCGDL--GVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++     D+ G  V ++G +   R HG   F DI D YG  Q+    +    E 
Sbjct: 44  RTHTSKEVKDNYEDLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103

Query: 62  AKSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            K  ++     ++ + G V        + +I   Q+   + +          PLP     
Sbjct: 104 LKEYKTFDIGDIISVTGTVFKTKTGETSIHITDFQLVCKSLR----------PLPEKWHG 153

Query: 119 EYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                +R++ R++DL      RDT     +KRT II SMR  +    F+E  TPIL+  +
Sbjct: 154 LKDPDLRYRQRYVDLIINQDVRDTF----IKRTAIIKSMREFLDNRGFLEVETPILSPIA 209

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+          Y L  A + Y + L+  GF++ ++I   FR+E       P 
Sbjct: 210 GGAAAKPFITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283
           EF  +++  ++ + +D++   EN++  + E+      V            + R+   DA+
Sbjct: 268 EFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGEEIDFTPPWRRLTMVDAV 327

Query: 284 RRY-GTDKPDLRNPIIMHNVTEHFVHSEFR 312
           + Y G D   ++N I    + +   H EF+
Sbjct: 328 KEYAGVDFNIIKNDIEARTIAKE-KHIEFK 356



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + GMPP GG+  GIDR++M L    ++R+V LFP
Sbjct: 460 SLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFP 495


>gi|317049376|ref|YP_004117024.1| lysyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316950993|gb|ADU70468.1| lysyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 505

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 131/296 (44%), Gaps = 27/296 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + D+G  V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L  
Sbjct: 61  LEDLGIEVSVAGRMMTRRIMGKASFITLQDVGGRIQLYVARDDLAEGVYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D        R++I+  +R  M+  +F+E  TP++    P GA  R F+         
Sbjct: 175 IANDESRHTFQVRSKIMAGIRQFMVGRDFMEVETPMMQVI-PGGASARPFITHHNALDID 233

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDD 248
            Y L  AP+ Y + L+  GFDR F+I   FR+E   PR +    EF  +++ M++ +  D
Sbjct: 234 MY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHN---PEFTMMELYMAYADYKD 289

Query: 249 ILNTMENVLRGVFEEF---------SNGNTVSNNFLRICYDDAIRRY--GTDKPDL 293
           ++   E++ R + ++           N       F ++   +AI++Y   TD  DL
Sbjct: 290 LIELTESLFRTLAQDVLGTTEVPYGDNTFDFGKPFEKLTMREAIKKYRPETDLADL 345



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|153952825|ref|YP_001393590.1| lysyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219853490|ref|YP_002470612.1| hypothetical protein CKR_0147 [Clostridium kluyveri NBRC 12016]
 gi|189082956|sp|A5N4L1|SYK_CLOK5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|146345706|gb|EDK32242.1| LysS [Clostridium kluyveri DSM 555]
 gi|219567214|dbj|BAH05198.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 502

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 124/268 (46%), Gaps = 22/268 (8%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++     +  G+ V ++G +   R HG   F D+ D YG  Q+    +    E 
Sbjct: 44  RTHTSKEIKDNYETLDGTDVTVAGRLMSKRVHGKAGFSDLYDRYGKIQLYIKINDVGEEK 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  +S  +    G ++S S +       TG++ +     + L+     PLP        
Sbjct: 104 LKEYKSYDI----GDILSVSGKVFKTR--TGEVSIHITDFQ-LAAKSLKPLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
             +R++ R++DL      RDT     +KRT +I ++R  +   ++IE  TPIL++ +   
Sbjct: 157 PDLRYRQRYVDLIINQDVRDTF----LKRTAVIRAIREFLDGRDYIEVETPILSSIAGGA 212

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            A+ F+          Y L  A + Y + L+  GF++ ++I   FR+E       P EF 
Sbjct: 213 AAKPFITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDVRHNP-EFT 270

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEE 263
            +++  +F + +D++   EN+L  V E+
Sbjct: 271 AMELYEAFSDYNDMMELTENMLAYVCEK 298



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DRI+M L  + ++R+V LFP
Sbjct: 460 ALEIGMPPTGGLGIGLDRIIMFLTNSYSIRDVILFP 495


>gi|219275592|ref|NP_001136421.1| asparaginyl-tRNA synthetase, cytoplasmic isoform 2 [Rattus
           norvegicus]
          Length = 507

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 121/301 (40%), Gaps = 42/301 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 84  GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 130

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 131 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 190

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ I    R       + E +TP L  +  EG           
Sbjct: 191 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 250

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   EF  ++ E  F+  +
Sbjct: 251 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 307

Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI---RRYGTDKP 291
           D+L+ +E+        VL+      V++   N       F R+ Y DAI   R +   K 
Sbjct: 308 DLLSRLEDLVCDVVDRVLKSPVASIVYDLNPNFKAPKRPFRRMNYSDAIEWLREHDVKKE 367

Query: 292 D 292
           D
Sbjct: 368 D 368



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 424 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 479

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  +L   ++R+V L+P     C
Sbjct: 480 ERFLSWILNRYHIRDVCLYPRFLQRC 505


>gi|71404256|ref|XP_804850.1| lysyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70868022|gb|EAN82999.1| lysyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 652

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 157/359 (43%), Gaps = 59/359 (16%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-----PDSA 57
           RY   S GD       + VR++G V  VR  G IIF+ IR +    QVV           
Sbjct: 88  RYGYLSSGDRAAQ---ATVRVAGRVTSVRDIGKIIFVTIRSNGNELQVVGQVGEHFTRED 144

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPV 114
             ++  S+R   ++  DG         +   +  G++ ++A ++ ILS     + +  P 
Sbjct: 145 LKKLKVSLRVGDIIGADG---------VPCRMQRGELSVAASRMLILSPYVCTDRVVCPN 195

Query: 115 FGEREYP----ESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
              R +       ++++YRF D+  +  + + I KR  ++ ++R      NF+E  TP+L
Sbjct: 196 L--RGFTVLQDNDVKYRYRFTDMMTNPCVIETIKKRHVMLQALRDYFNERNFVEVETPVL 253

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T +S   A+ F+     N    + L  AP+ + +  +  G +R ++I   FR+ED    
Sbjct: 254 HTVASGANAKSFVTHHNANAMDLF-LRVAPELHLKQCIVGGMERIYEIGKVFRNEDADRS 312

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLR------------GVFEEFSNGNTVSNN--- 273
             P EF   +   ++   +D++   E++ R             ++ E ++GN V+ +   
Sbjct: 313 HNP-EFTSCEFYAAYHTYEDLMPMTEDIFRQLAMRVNGTTVVQIYPENAHGNPVTVDLGK 371

Query: 274 -FLRI-CYDDAIRRYGTDKP---DLRNP---------IIMHNVTEHFVHSEFRVFSKIL 318
            F R+  YD+  R  G + P   +L  P         ++ +N+    V +  ++F K++
Sbjct: 372 PFRRVSVYDEIQRMSGVEFPPPNELNTPKGIAYMSVVMLRYNIPLPPVRTAAKMFEKLI 430



 Score = 41.6 bits (96), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 25/38 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           ++ Q G+PP  G   GIDR +MLL  + N+R+  +FP+
Sbjct: 517 KSLQVGLPPTAGWGMGIDRALMLLTNSSNIRDGIIFPL 554


>gi|125624792|ref|YP_001033275.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166980088|sp|A2RMQ1|SYN_LACLM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|124493600|emb|CAL98585.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071592|gb|ADJ60992.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 447

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 115/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  WV      G + FL +RD     Q VV  P+          +A F+  K +
Sbjct: 14  VGETVKIGAWVADKSGKGKLQFLQLRDGTAFFQAVVFKPNMIEKFGEEEGTAKFDEIKHL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V   S             EL   ++E++  + + P+     +E+     
Sbjct: 74  SQETSVYVTGVVKEDSRSKFG-------YELDVTELEVIGHSHDYPIT---PKEHGVEFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E   +      
Sbjct: 124 LDNRHLWLRSKRQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILSGNAAENTTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E  
Sbjct: 180 --ETDYFGNPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYP 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           FV  D+ L+  E     +++GV +  +                +   F R+ YDDAI
Sbjct: 238 FVTHDESLDIQEAYVKALIQGVLDNAAYALETLERDTSMLQKYIDTPFKRVSYDDAI 294


>gi|291241692|ref|XP_002740746.1| PREDICTED: CG6796-like [Saccoglossus kowalevskii]
          Length = 482

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 23/251 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID---GLV 77
           V + GW+  +R H  I F+DIRD             +C +  + +    V+  D   G  
Sbjct: 51  VSVKGWIQSLRSHKDITFIDIRD------------GSCLQTLQVILPSNVISSDLTYGSS 98

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    + + ++     +E+ A  I ++   +    P+  +  +      +Y  L  R + 
Sbjct: 99  VEVRGQLLQSSHKGQSVEMHATDINMIGTCDSEVYPIKVKTRHSFEYLRQYPHLRCRTNA 158

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS----FYA 193
               +  R      +       +FI  +TPI+T++  EGA +      +++      F+ 
Sbjct: 159 FGSLLRVRNAATMLIHSYFQDNSFIHINTPIITSNDCEGAGELFKIEVISESEECKHFFD 218

Query: 194 LP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDI 249
           +P       Q +   MASG  + +   P FR E+ ++ +   EFY ++ E++F +  +DI
Sbjct: 219 VPVYLTVSGQLQLEAMASGLSKVYTFGPTFRAENSQTRKHLAEFYMVEAEVAFTQSLEDI 278

Query: 250 LNTMENVLRGV 260
           +  ME  ++ V
Sbjct: 279 MQIMEGCVKCV 289


>gi|19074329|ref|NP_585835.1| ASPARTYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74697556|sp|Q8SRQ8|SYDC_ENCCU RecName: Full=Probable aspartyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Aspartate--tRNA ligase; Short=AspRS
 gi|19068971|emb|CAD25439.1| ASPARTYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 473

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 114/275 (41%), Gaps = 27/275 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSAC-------FEIA 62
           DL  S  G  V + G+V +    G  IF+ +RD     Q +   P           F   
Sbjct: 18  DLDGSLDGRCVSVRGFVFKSSCTGKYIFIVLRDGGCTVQCMCEKPTDGSGGLTMPEFSSL 77

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFG----- 116
           + V  E  + I G V+ +  E    +     IE+      +LS+A++ LP  +       
Sbjct: 78  RKVTHESYIEIRGRVVKQGMEISGCS--KKDIEVRILGFRVLSIADKSLPFAMKDVSATA 135

Query: 117 -EREYPES-------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
            ERE   +       IR   R +DLR             ++   R  +    F+E  T  
Sbjct: 136 EEREKNPTLQNVAYHIRLDNRAMDLRAPQTRATFRVVDGVMFFFRTYLRQNGFMEIKTSK 195

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L  SS EG  +        + +F A  Q+PQ YKQ+ +  GF R ++I   +R E+   +
Sbjct: 196 LIGSSSEGGANLFSVDYFKRKAFMA--QSPQLYKQMAIVGGFKRVYEIGHVYRAEESNIN 253

Query: 229 RLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262
           R   EF  LDMEM    + +D++  + ++L  +F+
Sbjct: 254 RYLSEFVGLDMEMEICTDYNDVIRFIHSMLVSIFD 288



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 30/127 (23%)

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           PFY + +EEK I  +                          YD +  G EI SG  R  +
Sbjct: 373 PFYTYRDEEKGITRS--------------------------YDFILRGQEILSGAQRVSI 406

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            + +++     GIS     +  GG   +F+ G PPHGG   G++R++    G  ++R  S
Sbjct: 407 YKDLVKYVEEHGISP----SSLGGYLESFKYGAPPHGGCGIGLERLMKAYFGMGDIRCFS 462

Query: 561 LFPMSQN 567
           LFP   N
Sbjct: 463 LFPRDPN 469


>gi|167044234|gb|ABZ08915.1| putative tRNA synthetases class II (D, K and N) [uncultured marine
           microorganism HF4000_APKG5H11]
          Length = 509

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 122/258 (47%), Gaps = 21/258 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG-LV 77
           V L+G +  +R  G   FLD++D  G+ Q +   N     F++ K++     L + G L+
Sbjct: 60  VTLAGRITSIRDMGKAAFLDLQDASGVIQALLRQNNLKDGFDLLKNLDIGDHLGVRGNLI 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL--R 134
            +R          TGQ+ + A ++ + + V   LP    G ++     R++ R+LDL   
Sbjct: 120 RTR----------TGQVTIDAMELTVTAKVMRPLPEKWHGLKDV--ETRYRQRYLDLIAN 167

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYA 193
           +D +    V R++++  +R  +    F+E  TPIL   ++   A+ F+          Y 
Sbjct: 168 QDEVMPVFVLRSKVVRGIRRFLDDRGFLEVDTPILVPVAAGAHAKPFVTHHNALDQQLY- 226

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  A + Y + L+  GFD+ ++I   FR+E    D  P EF  L+   ++ + +D++  +
Sbjct: 227 LRIATELYLKRLIIGGFDKVYEIGRVFRNEGIDQDHNP-EFTLLESYEAYADYNDVMEMV 285

Query: 254 ENVLRGVFEEFSNGNTVS 271
           E ++  +  E +    V+
Sbjct: 286 EQMVSTIAIEVNGSTKVT 303



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 4/67 (5%)

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
           E V+ +      A + GMPP GG+  GIDR+VMLL G +++R+V LFP  +       G 
Sbjct: 442 EDVDRQDDDFLTAMEYGMPPTGGLGIGIDRLVMLLAGQRSIRDVLLFPQMRT----QQGG 497

Query: 576 PSTVSVE 582
           P+T ++E
Sbjct: 498 PTTENIE 504


>gi|326330922|ref|ZP_08197222.1| aspartyl-tRNA synthetase [Nocardioidaceae bacterium Broad-1]
 gi|325951280|gb|EGD43320.1| aspartyl-tRNA synthetase [Nocardioidaceae bacterium Broad-1]
          Length = 455

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 111/260 (42%), Gaps = 23/260 (8%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
              L  +  G+ VRL G VHR R    + FL +RD  G+ QVV  P        ++   E
Sbjct: 9   AARLTAATPGTTVRLCGHVHRRRELATVTFLVLRDRSGLAQVVVRPGDGQ----QAPTEE 64

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G+       T N     G +E+++  +  LS    L  PV  E   PE      
Sbjct: 65  TPVEVIGVA------TPNPQA-PGGVEVTSPAVTTLS-EPALTSPV--ELWRPELAAALP 114

Query: 129 RFLDLRRDTL-HKNIVKRTRI----INSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
             LD    T  H  +  R  +    +   R  + A  F E  +P +  S+ E   +    
Sbjct: 115 TLLDHAPVTWRHPAVRARWELAAASLRGFRATLDAAGFTEVHSPKIVDSATESGANVFEI 174

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++ A  Q+PQ YKQ L A  F+R +++ P FR E   + R   E+  LD+E+ F
Sbjct: 175 DYFGRPAYLA--QSPQFYKQQL-AGVFERVYEVGPVFRAEPHDTVRHLAEYVSLDVELGF 231

Query: 244 V-EQDDILNTMENVLRGVFE 262
           + +  D+L  +   L G+ E
Sbjct: 232 IRDHRDVLAVLREALAGMVE 251



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G E+ +GG R H       A    G         +    +AF  GMPPHGG A 
Sbjct: 370 FDLLFRGLELVTGGQRLHRLTDYEAAIRARGEEPAA----YASYLQAFAHGMPPHGGFAL 425

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R V  L+ A N+REV+LFP
Sbjct: 426 GLERWVARLVRAANIREVALFP 447


>gi|117924339|ref|YP_864956.1| lysyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|226737093|sp|A0L6F7|SYK_MAGSM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|117608095|gb|ABK43550.1| lysyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 501

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 134/284 (47%), Gaps = 32/284 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V+++G +  +R  G + F  ++D  G  Q+ A  D    E+  +V  +     +L ++G 
Sbjct: 64  VKVAGRIMLLRNFGKLTFATLQDESGRLQISAQRDVVGAELYSTVFRKIEVGDILGVEGH 123

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDLRR 135
           +              G++ +  ++ E+LS A   PLP  F   E  E+ R++ R++DL  
Sbjct: 124 LFRTK---------VGELTVQVERFELLSKAVR-PLPEKFHGLEDVET-RYRQRYVDLIV 172

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFY 192
           +T  + I K R+R+I+ +R  M    F+E  TP++    P GA  R F+          Y
Sbjct: 173 NTEVREIFKTRSRVISRIRQFMEHRGFLEVETPMM-HPIPGGATARPFVTHHNALDTDLY 231

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +  ++++ 
Sbjct: 232 -LRIAPELYLKRLIVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYQAYTDYRELMDF 289

Query: 253 MENVLRGVFEEFSNGNTV----------SNNFLRICYDDAIRRY 286
            E +++ V ++ + G             S  + R+   +AI RY
Sbjct: 290 TEALVQDVVKDVNEGELTVAYQGQELDFSGPWARLTPAEAIVRY 333



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/37 (64%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR+VMLL  A N+REV LFP
Sbjct: 459 RALEYGMPPTGGEGIGIDRLVMLLTDAANIREVLLFP 495


>gi|296081811|emb|CBI20816.3| unnamed protein product [Vitis vinifera]
          Length = 404

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 22/195 (11%)

Query: 91  TGQIELSAQKIEILSVAEELPLPV----FGEREYPESI-------------RFKYRFLDL 133
           T Q+E+  +K+  +S AE LP+ +      E E  +++             R  YR LDL
Sbjct: 31  TQQVEVQVRKLYGISKAENLPINIEDAARSESEIEKALQAGEQLVRVNQDTRLNYRVLDL 90

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-QGSFY 192
           R          + ++ N  R  +++E F+   TP L   S EG        R++ +G   
Sbjct: 91  RTPANQAIFRVQCQVENIFRQFLLSEGFVGIHTPKLIGGSSEGGSAVF---RLDYKGQPA 147

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILN 251
            L Q+PQ +KQ+ +   F R F+I P FR ED  + R   EF  LD+EM   E   ++++
Sbjct: 148 CLAQSPQLHKQMAICGDFGRVFEIGPVFRAEDSFTHRHLCEFTGLDVEMEIKEHYFEVMD 207

Query: 252 TMENVLRGVFEEFSN 266
            ++ +   +F+  + 
Sbjct: 208 IVDRLFVAMFDSLNE 222



 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H+ + + +     GI  + +         +F+ G PPHGG   
Sbjct: 319 FDVFIRGEEIISGAQRVHVPDFLEKRAEACGIDVKTISTYID----SFRYGAPPHGGFGV 374

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML     N+R+ SLFP
Sbjct: 375 GLERVVMLFCALNNIRKTSLFP 396


>gi|170682698|ref|YP_001745043.1| lysyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|170520416|gb|ACB18594.1| lysyl-tRNA synthetase LysS [Escherichia coli SMS-3-5]
          Length = 505

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 129/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     I      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGIYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
            + ++      V+           F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|225022122|ref|ZP_03711314.1| hypothetical protein CORMATOL_02155 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945055|gb|EEG26264.1| hypothetical protein CORMATOL_02155 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 520

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 150/336 (44%), Gaps = 27/336 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G V  +R  G + F  I++  G TQ+ A    A  E+   + + W   +D G ++S
Sbjct: 73  VAIAGRVLFIRNTGKLCFATIQEGSG-TQIQAMLSLA--EVGPDLLAAWKSDVDLGDIVS 129

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-RRDT 137
                I    ++ + ELS         A+ L PLPV    +  E +R ++R+ DL  R+ 
Sbjct: 130 VRGRVI----VSKRGELSVLASSWHMAAKALRPLPV-AFADMSEDMRVRHRYTDLIMREK 184

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
             +N + R +++ ++R  + ++ F+E  TP+L T      AR F+  S       Y L  
Sbjct: 185 ARENALTRIKVMRALRNYLESQGFLEVETPMLQTLHGGAAARPFVTHSNALDIDLY-LRI 243

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y +  +  G +R F++   FR+E   S   P EF  L+   ++   DD    ++N+
Sbjct: 244 APELYLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFAMLETYQAWGTYDDCAELIKNL 302

Query: 257 LRGVFEEFSNGNTV-----SNNFLRICYDDAIRRYGTDKPDLRNPI-IMHNVTEHFVHSE 310
           ++ V  E     TV     S   L       I  Y +    L+    +   VT +   +E
Sbjct: 303 IQDVAMEVFGSTTVTLADGSEYDLGGAEWPTIEMYPSLNEALQRKFPVQPEVTVNSTVAE 362

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
            R  + ++ ++       +PAKGG G+    + + E
Sbjct: 363 LREIADVVGLD-------VPAKGGWGHGKLVEELWE 391



 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 15/93 (16%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQ-------AFSNVGISKE--VVENRFGGLYRAFQC 531
           ++DL   GFE+A+G   + + + ++Q       A    G  +E  V++  F     A + 
Sbjct: 427 KWDLYVRGFELATG--YSELVDPVIQRERFEDQARLAAGGDEEAMVLDEDF---LAAMEQ 481

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP  G   GIDR++M L G   +RE  LFP+
Sbjct: 482 GMPPTAGAGMGIDRLLMALTGL-GIRETVLFPL 513


>gi|149411872|ref|XP_001508683.1| PREDICTED: similar to lysyl-tRNA synthetase [Ornithorhynchus
           anatinus]
          Length = 601

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 26/257 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRS 67
           +SDV   V ++G +H  R  GG +IF D+R      QV+AN      +   F I   +R 
Sbjct: 125 LSDVT--VNVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFFHINNKLRR 182

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRF 126
             ++ + G                G++ +   +I +LS     LP   FG ++  +  RF
Sbjct: 183 GDIIGVRG---------NPGKTKKGELSIIPHEIVLLSPCLHMLPHLHFGLKD--KETRF 231

Query: 127 KYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP 183
           + R+LDL   D + +  + R++II  +R  +    F+E  TP++    P GA  + F+  
Sbjct: 232 RQRYLDLILNDFVRQKFITRSKIITYLRSFLDELGFLEIETPMMNVI-PGGAVAKPFITY 290

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                 + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++
Sbjct: 291 HNELDMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAY 348

Query: 244 VEQDDILNTMENVLRGV 260
            + +D++   E +L G+
Sbjct: 349 ADYNDLMEITEKMLSGM 365



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 540 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 575


>gi|160879288|ref|YP_001558256.1| tRNA synthetase class II (D K and N) [Clostridium phytofermentans
           ISDg]
 gi|160427954|gb|ABX41517.1| tRNA synthetase class II (D K and N) [Clostridium phytofermentans
           ISDg]
          Length = 441

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 13/243 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V L G ++++R   G  F+ +R    + Q + + + A F + + V    V      
Sbjct: 22  MGKKVTLHGSIYKIRKMSGFAFVLLRTKRAVVQCIYSEEFATFALEELVEESTVKV---- 77

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-EYPESIRFKYRFLDLR 134
                AE I         EL    ++ILS   EE P+ +  +  E        YR + LR
Sbjct: 78  ----EAEVILEERSKVGYELRLLSLKILSKPLEEAPVVIHNKLVEASIDTLLNYRPITLR 133

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +        +  I    R  +  + F E  +P +     EG  +    +   + ++  L
Sbjct: 134 NERERAIFKLQEGIAGGFRKFLAEQKFTEIHSPKIVQMGAEGGANIFSLNYFGKEAY--L 191

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+PQ YKQ+ M   F+R ++IAP FR E   + R   E+  +D EM ++E  + +  ME
Sbjct: 192 AQSPQFYKQM-MVGVFERVYEIAPVFRAEKHDTSRHLNEYTSVDFEMGYIESFEEIMQME 250

Query: 255 NVL 257
           + +
Sbjct: 251 SCM 253



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 8/106 (7%)

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P   ME  K  +    +   +DL+  G EI +GG R H  +  +      G++ E     
Sbjct: 340 PFYAMEDPKNTE----ETLSFDLLFRGLEITTGGQRIHDFKEQVDKLLKRGMNVE----D 391

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           F       + GMPPHGG+  G++R    L    NVR  +LFP   N
Sbjct: 392 FQSYLMMHRYGMPPHGGLGLGLERFTSKLCNQNNVRYATLFPRDIN 437


>gi|254229663|ref|ZP_04923073.1| lysyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262395206|ref|YP_003287060.1| lysyl-tRNA synthetase (class II) [Vibrio sp. Ex25]
 gi|151937784|gb|EDN56632.1| lysyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338800|gb|ACY52595.1| lysyl-tRNA synthetase (class II) [Vibrio sp. Ex25]
          Length = 505

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 119/243 (48%), Gaps = 25/243 (10%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIIN 150
           G + ++ ++ E+L+ A   PLP        + +R++ R++DL   +   K  + R+++++
Sbjct: 128 GDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRKAFIVRSKVMS 186

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 187 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 244

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V +E     
Sbjct: 245 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDFTEELLSSVAQEVLGST 303

Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEF 311
           ++            + R+   +AI++Y  D        + DL+N  +M ++ +  VH E 
Sbjct: 304 SMPYGDETVEFGGTYTRMSMFEAIKQYNPDHAQIQALTEEDLQNRELMVSIAKS-VHVEV 362

Query: 312 RVF 314
             F
Sbjct: 363 EDF 365



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 464 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 499


>gi|303389614|ref|XP_003073039.1| aspartyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302183|gb|ADM11679.1| aspartyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 473

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 27/268 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSAC-------FEIAKSVRSEW 69
           G  V + G+V +    G  IF+ +RD+    Q +   P           F   K V  E 
Sbjct: 25  GRHVIVRGFVLKSSCTGKYIFIVLRDNGCTVQCMCERPKDGKGDLSIEEFNSLKKVAHES 84

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPV------FGEREYPE 122
            + + G V+ +  E    +     +E+      +LS+A++ LP  +        ERE   
Sbjct: 85  YIEVKGRVVKQETEISGCS--KKDVEIRILGFSVLSMADKNLPFTMKDVSATIEEREKNP 142

Query: 123 S-------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
           +       IR   R LDLR             ++   R  +    F+E  TP L  SS E
Sbjct: 143 TLQSVAYHIRLDNRSLDLRAPQTRATFRVIDGVMFFFRDYLRRNGFVEIKTPKLIGSSSE 202

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           G  +        + +F A  Q+PQ YKQ+ +A G  R ++I   +R E+   +R   EF 
Sbjct: 203 GGANLFSVDYFKKKAFMA--QSPQLYKQMAVAGGLKRVYEIGHVYRAEESNINRYLSEFV 260

Query: 236 QLDMEMSF-VEQDDILNTMENVLRGVFE 262
            LDMEM    + +D++  + ++   +F+
Sbjct: 261 GLDMEMEISTDYNDVIKFIHSMFVSIFD 288



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD +  G EI SG  R ++ E +++  S  GIS     +  GG   +F+ G+PPHGG   
Sbjct: 388 YDFILRGEEILSGAQRVNVYEDLVRYVSEHGISP----SSLGGYLESFKYGVPPHGGCGI 443

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++    G  ++R  SLFP
Sbjct: 444 GLERVMKAYFGMGDIRCFSLFP 465


>gi|296222717|ref|XP_002757320.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic [Callithrix
           jacchus]
          Length = 548

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 113/289 (39%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V             +  E  LC +GL
Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGFLQCV-------------LADELCLCYNGL 171

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           ++S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 172 LLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 231

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K    R+ I    R       + E + P L  +  EG           
Sbjct: 232 NRHMMIRGENMSKIFRARSMITRCFRDHFFDRGYCEIAPPTLVQTQVEGGSTLFKLDYFG 291

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  +
Sbjct: 292 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLSFE 348

Query: 248 DILNTMENVLRGVFEEFSNGNTVS-------------NNFLRICYDDAI 283
           D+LN +E+++  V +        S               F R+ Y DAI
Sbjct: 349 DLLNRLEDLVCDVVDRVLKSPVASIVHELNPNFKPPKRPFKRMNYSDAI 397


>gi|224584829|ref|YP_002638627.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|254782479|sp|C0PY12|SYK_SALPC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|224469356|gb|ACN47186.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
          Length = 505

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 130/289 (44%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  K R++I+  +R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 NTFKTRSKILAGIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295
           R + ++      V            F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQDVLGTTQVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLGN 347



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|290969241|ref|ZP_06560766.1| lysine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290780747|gb|EFD93350.1| lysine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 510

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 117/256 (45%), Gaps = 17/256 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
           VRL+G +  +R HG   F  +RD  G  QV    D      + + K +    ++ ++G V
Sbjct: 66  VRLAGRLMAIRRHGKTAFCVLRDISGEIQVYFRKDLLGEDSYTLFKLLDIGDIIGVEGTV 125

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
            +           TG+  +     ++L+ A   PLP        +  R++ R+LDL  + 
Sbjct: 126 FTTH---------TGETTIRVSDWKLLTKALR-PLPEKFHGLTDKETRYRQRYLDLIVNP 175

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
            +    +KR++II  +R  +    F+E  TP+L T +    AR F           Y L 
Sbjct: 176 EVKDTFIKRSKIIKGIRRYLDERGFLEVETPMLHTIAGGAAARPFKTYHHALDMDMY-LR 234

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ + + L+  G +R +++  CFR+E   +   P EF  +++  +F + +D++   E+
Sbjct: 235 IAPELHLKRLLVGGLERVYEMNRCFRNEGIDTRHNP-EFTTVELYQAFGDLEDVIAITED 293

Query: 256 VLRGVFEEFSNGNTVS 271
           ++  + ++      ++
Sbjct: 294 IVATLAKQLYGTTKIT 309



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG+  GIDR+VM L  + ++R+V LFP
Sbjct: 459 RALEYGLPPTGGLGIGIDRLVMFLTDSASIRDVLLFP 495


>gi|326793288|ref|YP_004311109.1| aspartyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326544052|gb|ADZ85911.1| aspartyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 438

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 23/242 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V +   VH++R      F+ +R    I Q +   D  C    + ++    + + G + 
Sbjct: 24  ELVIIEACVHKIRTMSEFAFVILRTGRYIVQAIYEKDR-CKASIEQLKVGAYVRVKGHI- 81

Query: 79  SRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDLR--- 134
            R  E  N        EL  + +EILS+ A + PL V G ++    +      LD R   
Sbjct: 82  -REDERANLGF-----ELQLEDLEILSMPAADYPLNV-GHKKLGCGLEAN---LDNRSVA 131

Query: 135 -RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R+   + I K +  +++  R  M ++ F +  TP + A+  EG  +       NQ +F 
Sbjct: 132 LRNPYERAIFKVQEGVVSGFREFMESQGFTQVHTPKIVAAGAEGGANIFKLDYFNQDAF- 190

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+PQ YKQ  +A  FDR F+IAP +R E   + R   E+  LD EM ++  D + + 
Sbjct: 191 -LAQSPQFYKQTCVAF-FDRVFEIAPVYRAEKHNTSRHLNEYIGLDFEMGYI--DSMYDV 246

Query: 253 ME 254
           ME
Sbjct: 247 ME 248



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  +DL+  G EI +GG R H  +  +     +GI  E + +         + GMPPHGG
Sbjct: 350 ALSFDLLFRGLEITTGGQRIHDYQQQVDKMKEMGIDPEELSHYLS----IHKYGMPPHGG 405

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G++R VM LL  +NVR+ S+FP
Sbjct: 406 LGIGLERFVMKLLDLQNVRQASMFP 430


>gi|194431772|ref|ZP_03064063.1| lysyl-tRNA synthetase LysS [Shigella dysenteriae 1012]
 gi|194420128|gb|EDX36206.1| lysyl-tRNA synthetase LysS [Shigella dysenteriae 1012]
 gi|320182208|gb|EFW57111.1| lysyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|332087728|gb|EGI92855.1| lysyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 505

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
            + ++      V+           F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMHEAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|213855685|ref|ZP_03383925.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
          Length = 486

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 130/289 (44%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  K R++I+  +R  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 NTFKTRSKILAGIRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295
           R + ++      V            F ++   +AI++Y   TD  DL N
Sbjct: 299 RTLAQDVLGTTQVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347


>gi|261345592|ref|ZP_05973236.1| lysine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282566072|gb|EFB71607.1| lysine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 505

 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 13/260 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + D+   V ++G +   R  G   F  ++D  G  Q+  + D     +      +W L  
Sbjct: 60  LEDLNIDVTIAGRMMTRRIMGKASFATLQDVGGRIQIYVSRDDLPEGVYNEQFKKWDL-- 117

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++            TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 118 -GDILGAKGRLFKTK--TGELTVHCHEVRLLTKALR-PLPDKFHGLSDQETRYRQRYLDL 173

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D      + R++I+  +R  M+++ F+E  TP++    P GA  R F+         
Sbjct: 174 IANDESRNTFIIRSKILAEVRNFMVSQGFMEVETPMMQVI-PGGASARPFVTHHNALDID 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++
Sbjct: 233 MY-LRIAPELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMELYMAYADYRDLI 290

Query: 251 NTMENVLRGVFEEFSNGNTV 270
              E++ R + +E   GNTV
Sbjct: 291 KLTEDLFRTLTQEVL-GNTV 309



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 463 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 498


>gi|331002786|ref|ZP_08326300.1| hypothetical protein HMPREF0491_01162 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330413275|gb|EGG92643.1| hypothetical protein HMPREF0491_01162 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 647

 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 127/285 (44%), Gaps = 30/285 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F  ++D  G  Q     D+   +  K+ +   +    G +
Sbjct: 58  GKSVNIAGRLMSKRVMGKASFCHVQDLKGRIQAYVARDAVGEDEYKAFKKLDI----GDI 113

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRD 136
           +  + +       TG+I L A K+E+LS + + PLP           R++ R++DL   +
Sbjct: 114 VGITGDVFKTQ--TGEISLHATKVELLSKSLK-PLPEKFHGLTDTDTRYRQRYVDLIMNE 170

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +    +KR++II  +R  +  + F+E  TP+L +++   A      +R     F AL +
Sbjct: 171 DVKDTFIKRSKIITEIRKFLDGQGFMEVETPMLVSNAGGAA------ARPFNTHFNALDE 224

Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                 + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   ++
Sbjct: 225 DVKLRISLELYLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYHGMM 283

Query: 251 NTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286
           +  EN+ R + E      T+            F RI   DAI++Y
Sbjct: 284 DLTENMFRHLAEVVCGSTTIPYAEAMIDLGKPFERITMVDAIKKY 328



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 28/41 (68%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++ 
Sbjct: 455 ALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLFPTMKSL 495


>gi|217967320|ref|YP_002352826.1| asparaginyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336419|gb|ACK42212.1| asparaginyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 433

 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 19/242 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS-----VRSEWVLCIDG 75
           V + GW+   R  G I+FL IRD  G  Q VA  D+   E   S     + S  ++  D 
Sbjct: 19  VEIRGWLFNKRSSGKIVFLIIRDGTGYIQGVATLDNFTEEELDSFEKIPIESSLIVVGDL 78

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
               R+          G  EL  +++ I+S +E+ P+    ++++      + R L +R 
Sbjct: 79  RREPRAP---------GGYELLLKRVNIVSYSEDYPI---QKKDHSVDFLLERRHLWIRS 126

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              +  +  R+ ++ ++R  +  + F+    PILT SS EG          + G  Y L 
Sbjct: 127 RKQNAILRIRSEVVKAIRDFLDEKGFVLIDAPILTPSSCEGTTTLFSLDYFDLGKAY-LS 185

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+ Q Y +      F + +   P FR E  ++ R   EF+ ++ EM+F +  D +   E 
Sbjct: 186 QSGQLYME-AACMAFGKVYCFGPAFRAEKSKTRRHLTEFWMVEPEMAFWDWQDNMKLQEE 244

Query: 256 VL 257
           ++
Sbjct: 245 LV 246


>gi|116332751|ref|YP_794278.1| lysyl-tRNA synthetase (class II) [Lactobacillus brevis ATCC 367]
 gi|116098098|gb|ABJ63247.1| Lysyl-tRNA synthetase (class II) [Lactobacillus brevis ATCC 367]
          Length = 502

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 125/270 (46%), Gaps = 15/270 (5%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           +V ++G +   R  G   F+D+ D  G+ Q  A  D    E+ +   + +     G  + 
Sbjct: 66  YVAVAGRITGKRGSGKAGFIDLLDRTGVVQGYARQD----ELGEETYALYKTLDLGDFIG 121

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                I  N  TG + L   + E LS +   PLP  +     PE+I ++ R+LDL   R+
Sbjct: 122 AKGYVIKTN--TGALTLRMTEFEFLSKSLR-PLPDKYHGLTNPETI-YRQRYLDLISNRE 177

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
           +  +  +K T+I  ++R  +  E ++E  TP+L T +    AR F+  S       Y L 
Sbjct: 178 SFDR-FLKVTKIKKAIREYLDGEGYLEVDTPVLQTEAGGAEARPFITHSNAFDIPLY-LR 235

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + Y + L+  GF++ +++   FR+E       P EF  +++  ++ +  D+++ +EN
Sbjct: 236 IATELYLKRLIVGGFEKVYELGKDFRNEGTDLRHNP-EFNMVEVYTAYTDYTDVMDLVEN 294

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           + R V  + +    ++     I  D   +R
Sbjct: 295 LFRFVANKVNGSGKLTYQGKDIDLDSDFKR 324



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 8/52 (15%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GI ++ VE        A + GMPP GG+  GIDR+ MLL  + ++R+V LFP
Sbjct: 453 GIDEDYVE--------AMEYGMPPTGGLGIGIDRMTMLLTDSTSIRDVMLFP 496


>gi|290894520|ref|ZP_06557472.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290555921|gb|EFD89483.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 498

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 49/358 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F  I+D +   Q+    D+    I +   + + L   G ++  
Sbjct: 63  VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAIFKLADLGDIIGI 118

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                  N  TG++ + A +  +LS +   LP    G ++  +  R++ R+LDL  +   
Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           +N  V R++I+   R  M ++ F+E  TP+L T +    A+ F+          Y L  A
Sbjct: 175 QNRFVMRSKILKYTRDYMDSQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D++N +E ++
Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMNLVEGLV 292

Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD---------------KP 291
             V ++  NG T          ++ N+ RI   DA++ Y G D               K 
Sbjct: 293 STVCKQV-NGTTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEARELAKKH 351

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343
           D+  P+  H    H ++  F    +   + P + V+  P      AK    +  F DR
Sbjct: 352 DV--PVTEHMTYGHILNEFFETHVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG+  G+DR+VMLL  A ++R++ LFP  ++
Sbjct: 457 ALEYGLPPTGGLGIGVDRLVMLLTNAPSIRDILLFPTMKH 496


>gi|256090519|ref|XP_002581235.1| lysyl-tRNA synthetase [Schistosoma mansoni]
 gi|238667091|emb|CAZ37474.1| lysyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 485

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 128/266 (48%), Gaps = 15/266 (5%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEI 61
           +Y + S G+  + DV   V ++G VH  R  G  +IF DIR      QV+AN  S   E 
Sbjct: 71  KYSSLSSGE-HLDDVS--VSIAGRVHAKRSAGSKLIFYDIRSEDCRLQVMANIRSYKSET 127

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREY 120
                +E +   D +  S S          G++ +   +I++LS    +LP   +G ++ 
Sbjct: 128 EFHDINEIIHLGDIIGCSGSP----GKSKLGELSIIPHEIKLLSPCLYQLPHMHYGVKD- 182

Query: 121 PESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGAR 178
            +  RF+ R+LDL   + + +  + R RIIN +R  +    F+E  TP++ T +    A+
Sbjct: 183 -KETRFRQRYLDLLMNEDVRQRFITRARIINYVRRFLDDLGFLEVETPMMNTIAGGAAAK 241

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+        + Y +  AP+ Y ++L+  G +R +++   FR+E       P EF   +
Sbjct: 242 PFITYHNDLNMNLY-MRVAPELYLKMLIIGGLNRVYELGRVFRNEGIDLTHNP-EFTSCE 299

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEF 264
             M++ + +D++   E+++ G+ +  
Sbjct: 300 FYMAYADYEDLMTITEDLISGLVKHL 325


>gi|193213961|ref|YP_001995160.1| lysyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193087438|gb|ACF12713.1| lysyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 517

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 35/295 (11%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D  + V ++G +  +R  G   F  ++D  G  QV    D    E+ ++    + L   G
Sbjct: 68  DEKAAVAIAGRIMSIRKMGKASFFHVQDASGRIQVYIKKD----EVGETAYQVFKLLDIG 123

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----------ESI 124
            ++     +      TG++ + A+  E+LS +   P+P+  ++E             + +
Sbjct: 124 DIVGVKGFSFRTK--TGEVSVHAEACELLSKSLR-PMPIAKQKEVDGKTVTYDAFSDKEL 180

Query: 125 RFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182
           R++ R++DL  +   K + +KRT++INS+R  +    ++E  TPIL        AR F+ 
Sbjct: 181 RYRQRYVDLIVNPEVKTVFLKRTKMINSIRNFLNERGYLEVETPILQPIYGGASARPFVT 240

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDMEM 241
                    Y L  A + Y + L+  GFD  ++ A  FR+E    DR    EF Q+++ +
Sbjct: 241 HHNTLDMPLY-LRIANELYLKRLIVGGFDGVYEFAKDFRNEG--MDRFHNPEFTQIELYV 297

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN----------NFLRICYDDAIRRY 286
           ++ +   ++N +E +L    E   NG+TV             F R+   D+I+ Y
Sbjct: 298 AYKDYAWMMNLVEEMLSKTAEAV-NGSTVVEFAGHKIDLKPPFKRMTITDSIKEY 351



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  GIDR+ M+L G +++R+V  FP
Sbjct: 476 RALEYGMPPCAGLGIGIDRLAMILTGQESIRDVLFFP 512


>gi|291540501|emb|CBL13612.1| Lysyl-tRNA synthetase (class II) [Roseburia intestinalis XB6B4]
          Length = 498

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 135/286 (47%), Gaps = 32/286 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F +I+D  G  QV    D+   EI K  +   +  I G+ 
Sbjct: 56  GKQVSIAGRMMFKRVMGKASFCNIQDLKGRIQVYVARDNIGEEIYKDFKKSDIGDIWGV- 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136
                +       TG+I + A+++ +LS + + LP    G  +    +R++ R++DL  +
Sbjct: 115 -----KGYAFRTKTGEISIHAEEMTLLSKSLQILPEKFHGLTD--TDMRYRQRYIDLIMN 167

Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              K + +KR++I+  +R  +   +F+E  TP+L +++   A      +R  +  + AL 
Sbjct: 168 QESKEVFIKRSKILKEIRNFLADRDFMEVETPMLVSNAGGAA------ARPFETHYNALN 221

Query: 196 Q------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + +
Sbjct: 222 EDVKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGM 280

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           +   E++ R + E+      +S N         F R+  +DAI++Y
Sbjct: 281 MELTESMFRYLAEKVCGSTKISYNGIEIDLGKPFTRMTMNDAIKKY 326



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 28/41 (68%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++ 
Sbjct: 453 ALEIGMPPTGGIGYGIDRLVMLLTDSAAIRDVLLFPTMKSL 493


>gi|149064469|gb|EDM14672.1| rCG46601, isoform CRA_a [Rattus norvegicus]
 gi|149064470|gb|EDM14673.1| rCG46601, isoform CRA_a [Rattus norvegicus]
          Length = 515

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 121/301 (40%), Gaps = 42/301 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 92  GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 138

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 139 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 198

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ I    R       + E +TP L  +  EG           
Sbjct: 199 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 258

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   EF  ++ E  F+  +
Sbjct: 259 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 315

Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI---RRYGTDKP 291
           D+L+ +E+        VL+      V++   N       F R+ Y DAI   R +   K 
Sbjct: 316 DLLSRLEDLVCDVVDRVLKSPVASIVYDLNPNFKAPKRPFRRMNYSDAIEWLREHDVKKE 375

Query: 292 D 292
           D
Sbjct: 376 D 376



 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 432 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 487

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  +L   ++R+V L+P     C
Sbjct: 488 ERFLSWILNRYHIRDVCLYPRFLQRC 513


>gi|157690864|ref|YP_001485326.1| lysyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157679622|gb|ABV60766.1| lysine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 499

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 127/281 (45%), Gaps = 35/281 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  I+D  G  Q+    DS     +E+ KS     ++ + G V
Sbjct: 65  VTIAGRMMTKRGKGKAGFAHIQDLEGQIQIYVRKDSVGEEAYELFKSSDLGDIIGVTGTV 124

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
              +          G++ + A   E+L+ A   LP    G ++  +  R++ R+LDL  +
Sbjct: 125 FKTNV---------GELSIKATSFEVLTKALRPLPDKYHGLKDVEQ--RYRQRYLDLIVN 173

Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
              K   + R++II SMR  + ++ ++E  TP +  S P GA  R F+          Y 
Sbjct: 174 PESKQTFIMRSKIIQSMRRYLDSKGYLEVETPTM-HSIPGGASARPFITHHNALDMPLY- 231

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI+N  
Sbjct: 232 MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDIMNLT 290

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
           EN++  + EE     T+              +YG D+ DL+
Sbjct: 291 ENLIAHIAEEVLGTTTI--------------QYGEDEIDLK 317



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GG+  GIDR++MLL  + ++R+V LFP  +N
Sbjct: 459 ALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLFPQMRN 498


>gi|50303123|ref|XP_451499.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640630|emb|CAH03087.1| KLLA0A11484p [Kluyveromyces lactis]
          Length = 474

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 121/270 (44%), Gaps = 19/270 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           ++SGWV  VRP   I F++I+D   +    VV    +  F   K    + V  +   ++ 
Sbjct: 57  QVSGWVKNVRPLKTITFVEIQDGTTLQDLTVVLKQGAPSF---KPSLGQSVTVLHPEIVQ 113

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
           R  +      +   ++L    +E     ++  LP    R+ PE   FK+R       T  
Sbjct: 114 RKNQQFETLCMPENLKLIGPTVEYPVQNKQTSLPTL--RKLPE---FKHR------TTYL 162

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
            N+++ R ++ + +   +   +F     PILT+   EGA +     + +      L  + 
Sbjct: 163 SNLLRFRHKVESQLTKTLDGLDFTMVRPPILTSIDCEGAGEMFNLKQDHWDEIVNLTVSS 222

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD-ILNTMENVL 257
           Q + ++LM  G  R + + PCFR E   ++R   EF+ L++E SFV++++ +++ +E ++
Sbjct: 223 QLHLEVLMM-GLGRVYCLQPCFRAEKSDTNRHLCEFWMLEVEASFVDKNESLMDLVELMV 281

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
           + V    S    +   F   C  D   R+ 
Sbjct: 282 KSVVLSLSETKDLPKYFPVGCNIDITSRWA 311


>gi|209879756|ref|XP_002141318.1| aspartyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
 gi|209556924|gb|EEA06969.1| aspartyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
          Length = 537

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 114/272 (41%), Gaps = 54/272 (19%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--LCIDG 75
           G F+ L   +   R  G + F  +R  +   Q VAN +       K    +W+  L I+ 
Sbjct: 88  GKFLWLRARIAESRCKGSLGFFLLRQSFFSVQGVANVNQG----TKKDLLKWLKSLPIES 143

Query: 76  LVMSRSAETINANIITGQIELSA--QKIEIL--------SVAEELPLPVFGEREYPE--- 122
           +V       I   ++  +I +S+  Q++EI+        + ++ELP  +  +   PE   
Sbjct: 144 IV------DIYGKVVIPEIPVSSSSQRVEIIIHKAFCVSAASKELPFQL-KDANRPEVDS 196

Query: 123 ------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-----NFIECS 165
                        +R   R LDLR  T     + R   I +M C +  E      FIE  
Sbjct: 197 HFSDGNQIRVLQDVRLDNRVLDLR--TFANQAIFR---IQAMVCELFREFLIQNRFIEIH 251

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP +   + EG           Q +   L Q+PQ YKQ+ +    DR F+I P FR E+ 
Sbjct: 252 TPKILGGASEGGASVFTLKYFGQPA--CLAQSPQLYKQMAICGDMDRVFEIGPVFRAENS 309

Query: 226 RSDRLPGEFYQLDMEM----SFVEQDDILNTM 253
            + R   EF  LD+EM    S++E  D+L  +
Sbjct: 310 NTHRHLCEFVGLDIEMTIKNSYIEVVDLLEEL 341



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H  + +++     G+  E ++        +F+ G  PHGG   
Sbjct: 452 YDFFMRGEEIISGAQRIHDYDFLMKRAEECGLVIESIKEYID----SFKLGAFPHGGCGI 507

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML L   N+R  S+FP
Sbjct: 508 GLERVVMLFLNLGNIRRSSMFP 529


>gi|166030715|ref|ZP_02233544.1| hypothetical protein DORFOR_00389 [Dorea formicigenerans ATCC
           27755]
 gi|166029507|gb|EDR48264.1| hypothetical protein DORFOR_00389 [Dorea formicigenerans ATCC
           27755]
          Length = 647

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 38/290 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G V + R  G   F +I D  G  Q     DS   E  K  +   +    G +
Sbjct: 58  GKHVSVAGRVMQKRVMGKASFCNILDLSGNIQSYVARDSIGEESYKDFKKLDI----GDI 113

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---- 133
           +    E       TG+I + A  +++LS + ++ LP           R++ R++DL    
Sbjct: 114 IGIEGEVFKTK--TGEISIHASAVKLLSKSLQI-LPEKFHGLTNTDTRYRQRYVDLIVNP 170

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             RDT     +KR+RII+++R  +  + F+E  TP+L A++   A      +R  +  F 
Sbjct: 171 EVRDTF----IKRSRIISAVRRYLDGQGFMEVETPMLVANAGGAA------ARPFETHFN 220

Query: 193 ALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           AL +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + 
Sbjct: 221 ALNEDLKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDY 279

Query: 247 DDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
           + +++  EN+ R V +E      +            F RI   DA+++Y 
Sbjct: 280 NGMMDLTENLYRHVAQEVLGTTKIVYKGIEMDLGEPFERITMVDAVKKYA 329



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 29/41 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+ MLL GA+ +R+V LFP  ++ 
Sbjct: 455 ALEIGMPPTGGIGFGIDRMCMLLTGAEAIRDVLLFPTMKSL 495


>gi|255281438|ref|ZP_05345993.1| lysine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255267926|gb|EET61131.1| lysine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 649

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 131/286 (45%), Gaps = 30/286 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V L+G +   R  G   F +I+D  G  Q     DS   E  K+ +   +  I G+ 
Sbjct: 61  GKTVTLAGRMMSKRVMGKASFCNIQDLKGNIQSYVARDSIGEEEYKAFKKMDIGDIVGI- 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
                E       TG+I + A ++ +LS + ++ LP          +R++ R++DL  + 
Sbjct: 120 ---KGEVFKTK--TGEISIHASEVTLLSKSLQI-LPEKFHGLTNTDLRYRQRYVDLIMNP 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +    VKR+RII+++R  +  + F+E  TP+L  ++   A      +R  +  F AL +
Sbjct: 174 EVKDTFVKRSRIISAIRRYLDGQGFMEVETPMLVQNAGGAA------ARPFETHFNALNE 227

Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                 + + Y + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + + ++
Sbjct: 228 DLKLRISLELYLKRLIVGGLEKVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMM 286

Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           +  EN+ R V +E      +  N         F RI   DA+++Y 
Sbjct: 287 DLTENLYRYVAQEVLGTTKIVYNGVEMDLGKPFERITMVDAVKKYA 332



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+ MLL  ++ +R+V LFP
Sbjct: 458 ALEIGMPPTGGIGFGIDRMCMLLTDSQAIRDVLLFP 493


>gi|254832543|ref|ZP_05237198.1| lysyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 498

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 49/358 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F  I+D +   Q+    D+    I +   + + L   G ++  
Sbjct: 63  VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKLADLGDIIGI 118

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                  N  TG++ + A +  +LS +   LP    G ++  +  R++ R+LDL  +   
Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           +N  V R++I+   R  M  + F+E  TP+L T +    A+ F+          Y L  A
Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++ +E ++
Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292

Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD---------------KP 291
             V ++  NG T          ++ N+ RI   DA++ Y G D               K 
Sbjct: 293 STVCKQV-NGTTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEALELAKKH 351

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343
           D+  P+  H    H ++  F  + +   V P + V+  P      AK    +  F DR
Sbjct: 352 DV--PVTEHMTYGHILNEFFETYVEEKLVQPTF-VYGHPVEISPLAKKNKEDERFTDR 406



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG+  GIDR+VMLL  A ++R++ LFP  ++
Sbjct: 457 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 496


>gi|68535359|ref|YP_250064.1| lysyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|68262958|emb|CAI36446.1| lysyl-tRNA synthetase [Corynebacterium jeikeium K411]
          Length = 551

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 145/342 (42%), Gaps = 34/342 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G +  +R  G + F  ++D  G TQ+ A    A  E+ +   + W   +D G  + 
Sbjct: 99  VSVTGRLIFMRNTGKLCFATLQDGDG-TQLQAMLSLA--EVGEDALAAWKADVDLGDFIG 155

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEEL-PLPV-FGEREYPESIRFKYRFLDL-RRD 136
            +   I +     + ELS    E +  A+ L PLPV F E    E  R + R+ DL  R+
Sbjct: 156 VTGRVIASR----RGELSVMASEWVMAAKALRPLPVAFAEMN--EETRVRQRYNDLIVRE 209

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
              KN + R ++I ++R  M  E F+E  TP+L T      AR F+  S       Y L 
Sbjct: 210 EARKNAMTRVKVIRALRDYMEGEGFVEIETPMLQTLHGGAAARPFVTHSNALDIDLY-LR 268

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ + +  +  G DR F+I   FR+E       P EF  L+   ++ + DD   T   
Sbjct: 269 IAPELFLKRAVVGGIDRVFEINRNFRNEGVDKSHSP-EFAMLETYAAWGDYDDCARTTRE 327

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD------KPDLRNPIIMH-----NVTE 304
            ++ + ++ + G  +         D     +G +       P L   +         VT 
Sbjct: 328 SIQYIVDQLTKGTDLEGTGKVRLADGTEFDFGGEWKEIEMYPSLNEALARKYPGQPEVTI 387

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                E +  +K++ ++       +PAKGG G+    + + E
Sbjct: 388 DSTVEELKEIAKVIGLD-------VPAKGGWGHGKLVEEIWE 422



 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        I+    E   +  +N       ++  F     A + GM
Sbjct: 458 KWDLYVRGFELATGYSELIDPVIQRERFEDQARLAANGDDEAMRLDEDF---LAAMEQGM 514

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   GIDR++M L G   +RE  LFP+
Sbjct: 515 PPTAGTGMGIDRLLMALTGL-GIRETVLFPI 544


>gi|194017974|ref|ZP_03056581.1| lysyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010311|gb|EDW19886.1| lysyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 499

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 127/281 (45%), Gaps = 35/281 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  I+D  G  Q+    DS     +E+ KS     ++ + G V
Sbjct: 65  VTIAGRMMTKRGKGKAGFAHIQDLEGQIQIYVRKDSVGEEAYELFKSSDLGDIIGVTGAV 124

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
              +          G++ + A   E+L+ A   LP    G ++  +  R++ R+LDL  +
Sbjct: 125 FKTNV---------GELSIKATSFEVLTKALRPLPDKYHGLKDVEQ--RYRQRYLDLIVN 173

Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
              K   + R++II SMR  + ++ ++E  TP +  S P GA  R F+          Y 
Sbjct: 174 PESKQTFIMRSKIIQSMRRYLDSKGYLEVETPTM-HSIPGGASARPFITHHNALDMPLY- 231

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI+N  
Sbjct: 232 MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDIMNLT 290

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
           EN++  + EE     T+              +YG D+ DL+
Sbjct: 291 ENLIAHIAEEVLGTTTI--------------QYGEDEIDLK 317



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GG+  GIDR++MLL  + ++R+V LFP  +N
Sbjct: 459 ALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLFPQMRN 498


>gi|305666391|ref|YP_003862678.1| lysyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88708383|gb|EAR00620.1| lysyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 564

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 17/266 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-G 75
           G  V +SG +   R  G   F +++D  G  QV  N D  C    K+  +E +   +D G
Sbjct: 46  GKKVIISGRLMSRRIQGKASFAELQDSEGRIQVYFNRDEICVGEDKTKYNEVYKKLLDIG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP-------VFGEREYPESIRFK 127
            ++    E     +  G+  +  +   +LS A   LPLP       V+ E   PE +R++
Sbjct: 106 DIIGIEGELFTTQV--GEKTVMVKDFSMLSKALRPLPLPKKDGEGNVYDEFNDPE-LRYR 162

Query: 128 YRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R++DL  + ++ +  +KRT+I NS+R  +  + ++E  TPIL        AR FL    
Sbjct: 163 QRYIDLVVNPSVRETFIKRTKITNSIREFLNNKGYLEVETPILQPIPGGAAARPFLTHHN 222

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  A + Y + L+  GFD  ++ A  FR+E       P EF  +++ +++ +
Sbjct: 223 ALNIPLY-LRIANELYLKRLIVGGFDGVYEFAKDFRNEGMDRTHNP-EFTMIELYVAYKD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS 271
            + ++   E +L  V ++ +    V+
Sbjct: 281 YNWMMGMTEQLLEKVAKDATGSTKVT 306



 Score = 44.3 bits (103), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  GI  GIDR+VM +    +++EV  FP
Sbjct: 456 RALEYGMPPTSGIGIGIDRLVMFMTNNSSIQEVLFFP 492


>gi|312964851|ref|ZP_07779091.1| lysyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312290407|gb|EFR18287.1| lysyl-tRNA synthetase [Escherichia coli 2362-75]
          Length = 505

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNSGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
            + ++      V+           F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRSETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|315504462|ref|YP_004083349.1| tRNA synthetase class ii (d k and n) [Micromonospora sp. L5]
 gi|315411081|gb|ADU09198.1| tRNA synthetase class II (D K and N) [Micromonospora sp. L5]
          Length = 428

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G E+ +GG R H     L A +  G   E VE  + G   AF+ GMPPHGG A 
Sbjct: 343 FDLLFRGVELVTGGQRLHRHADYLAALAARG---EPVEP-YAGYVDAFRHGMPPHGGFAI 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R V  L GA NVREV+ FP
Sbjct: 399 GLERFVARLTGAANVREVTAFP 420



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 122/298 (40%), Gaps = 32/298 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           + VG+ VRL+GWVHR R    + FL +RD  G+ QVV    +   ++        V  + 
Sbjct: 11  ARVGATVRLAGWVHRRRLLKSVAFLIVRDAAGLAQVVVAAPAVREQVEALTEETVVEVVG 70

Query: 75  GLVMSRSA----ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            +V + +A    E +   +            ++        LP   +   P ++R   R 
Sbjct: 71  TVVANPTAPAGVEVVEPTVRPLGPPAVPPPFDLYRPVLTATLPTQLDHA-PVALRHPVRS 129

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
             LR              ++  R  +    F+E  TP + ASS E   +        + +
Sbjct: 130 AALRISAA---------AVSGFRATLDGRGFVEVHTPKVVASSTESGANVFALDWFGRPA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDI 249
           + A  Q+PQ YKQL M   F+R +++ P FR E   + R   ++  LD+E+ FV +  D+
Sbjct: 181 YLA--QSPQFYKQL-MVGVFERVYEVGPVFRAEPHDTVRHLAQYTSLDVELGFVADHRDV 237

Query: 250 LNTMENVLRGVFEEFSN---------GNTVSN---NFLRICYDDAIRRYG--TDKPDL 293
           +  +   L G+               G TV         + + DA++  G   D+PDL
Sbjct: 238 MAVLRETLAGMVATVGERAGGALATLGVTVPEVPAEIPAVHFTDALKIAGAPADEPDL 295


>gi|91226782|ref|ZP_01261435.1| lysyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91188913|gb|EAS75197.1| lysyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 505

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 118/243 (48%), Gaps = 25/243 (10%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIIN 150
           G + ++ ++ E+L+ A   PLP        + +R++ R++DL   +   +  V R+++++
Sbjct: 128 GDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMS 186

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 187 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 244

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V +E     
Sbjct: 245 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVAQEVLGST 303

Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEF 311
           ++            + R+   +AI+ Y  D        + DL+N  +M ++ +  VH E 
Sbjct: 304 SMPYGDETVEFGGTYTRMSMFEAIKHYNPDHSQIQALTEEDLQNRDLMVSIAKS-VHVEV 362

Query: 312 RVF 314
             F
Sbjct: 363 EPF 365



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 464 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 499


>gi|219275589|ref|NP_001020806.2| asparaginyl-tRNA synthetase, cytoplasmic isoform 1 [Rattus
           norvegicus]
 gi|149064471|gb|EDM14674.1| rCG46601, isoform CRA_b [Rattus norvegicus]
          Length = 558

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 121/301 (40%), Gaps = 42/301 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 135 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 181

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 182 VLSTESSVAVYGTLNLTPKGKQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLN 241

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ I    R       + E +TP L  +  EG           
Sbjct: 242 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFG 301

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   EF  ++ E  F+  +
Sbjct: 302 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFE 358

Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI---RRYGTDKP 291
           D+L+ +E+        VL+      V++   N       F R+ Y DAI   R +   K 
Sbjct: 359 DLLSRLEDLVCDVVDRVLKSPVASIVYDLNPNFKAPKRPFRRMNYSDAIEWLREHDVKKE 418

Query: 292 D 292
           D
Sbjct: 419 D 419



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 475 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  +L   ++R+V L+P     C
Sbjct: 531 ERFLSWILNRYHIRDVCLYPRFLQRC 556


>gi|215488190|ref|YP_002330621.1| lysyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|215266262|emb|CAS10691.1| lysine tRNA synthetase, constitutive [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 505

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
            + ++      V+           F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRSETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|189423826|ref|YP_001951003.1| lysyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189420085|gb|ACD94483.1| lysyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 492

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 13/266 (4%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           L+G +   R  G   F+ ++D  G  QV    D    E+     S  +  I G+V     
Sbjct: 58  LAGRIIARRSFGKAAFMQLQDRKGRIQVYVRKDDLGEEVFAQFESFDIGDIIGIV----- 112

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKN 141
                   TG++ + A+ I +L V   LPLP           R++ R++DL  +  + + 
Sbjct: 113 -GFPFRTKTGELSVHARSIRLL-VKSLLPLPEKFHGLTDVETRYRQRYVDLIVNPEVREL 170

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQAPQ 199
            +KR+RI+N +R  M + +F+E  TP++    P G  AR F+          Y L  AP+
Sbjct: 171 FIKRSRIVNLIRSFMTSRDFLEVETPMMH-QIPGGATARPFVTHHNALDMELY-LRIAPE 228

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++   +D+++  E +   
Sbjct: 229 LYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYQAYATFEDLMDFTEELFCH 287

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRR 285
           V E+       S   L I +    RR
Sbjct: 288 VAEQVLGTLGFSYQGLAISFQRPWRR 313



 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 449 RALEYGLPPTAGEGIGIDRLVMLLTDSASIRDVILFP 485


>gi|269964523|ref|ZP_06178763.1| lysyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269830760|gb|EEZ84979.1| lysyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 505

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 118/243 (48%), Gaps = 25/243 (10%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIIN 150
           G + ++ ++ E+L+ A   PLP        + +R++ R++DL   +   +  V R+++++
Sbjct: 128 GDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMS 186

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 187 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 244

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V +E     
Sbjct: 245 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVAQEVLGST 303

Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEF 311
           ++            + R+   +AI+ Y  D        + DL+N  +M ++ +  VH E 
Sbjct: 304 SMPYGDETVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDLQNRDLMVSIAKS-VHVEV 362

Query: 312 RVF 314
             F
Sbjct: 363 EPF 365



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 464 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 499


>gi|301321351|gb|ADK69994.1| conserved domain protein [Mycoplasma mycoides subsp. mycoides SC
           str. Gladysdale]
          Length = 86

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/83 (38%), Positives = 50/83 (60%)

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           F  + ++KE VE  FG    A++ G P H GIA G+DRI M+L  A+++R+V  FP + +
Sbjct: 2   FDTIELTKERVETNFGWFMNAYKYGAPYHSGIAWGLDRIAMILTNAQSIRDVIAFPKNSS 61

Query: 568 FCDLLMGSPSTVSVEQLRELGLR 590
             D +  +P  V  +QL EL ++
Sbjct: 62  GIDPMSNAPDLVDQKQLDELHIK 84


>gi|291534724|emb|CBL07836.1| Lysyl-tRNA synthetase (class II) [Roseburia intestinalis M50/1]
          Length = 645

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 135/286 (47%), Gaps = 32/286 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F +I+D  G  QV    D+   EI K  +   +  I G+ 
Sbjct: 56  GKPVSIAGRMMFKRVMGKASFCNIQDLKGRIQVYVARDNIGEEIYKDFKKSDIGDIWGI- 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136
                +       TG+I + A+++ +LS + + LP    G  +    +R++ R++DL  +
Sbjct: 115 -----KGYAFRTKTGEISIHAEEMTLLSKSLQILPEKFHGLTD--TDMRYRQRYIDLIMN 167

Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              K + +KR++I+  +R  +   +F+E  TP+L +++   A      +R  +  + AL 
Sbjct: 168 QESKEVFIKRSKILKEIRNFLADRDFMEVETPMLVSNAGGAA------ARPFETHYNALN 221

Query: 196 Q------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + +
Sbjct: 222 EDVKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGM 280

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           +   E++ R + E+      +S N         F R+  +DAI++Y
Sbjct: 281 MELTESMFRYLAEKVCGSTKISYNGIEIDLGKPFTRMTMNDAIKKY 326



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 28/41 (68%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++ 
Sbjct: 453 ALEIGMPPTGGIGYGIDRLVMLLTDSAAIRDVLLFPTMKSL 493


>gi|82545487|ref|YP_409434.1| lysyl-tRNA synthetase [Shigella boydii Sb227]
 gi|123728331|sp|Q31WF2|SYK_SHIBS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81246898|gb|ABB67606.1| lysine tRNA synthetase, constitutive [Shigella boydii Sb227]
 gi|332090907|gb|EGI95998.1| lysyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 505

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
            + ++      V+           F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|302869065|ref|YP_003837702.1| tRNA synthetase class II (D K and N) [Micromonospora aurantiaca
           ATCC 27029]
 gi|302571924|gb|ADL48126.1| tRNA synthetase class II (D K and N) [Micromonospora aurantiaca
           ATCC 27029]
          Length = 428

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G E+ +GG R H     L A +  G   E VE  + G   AF+ GMPPHGG A 
Sbjct: 343 FDLLFRGVELVTGGQRLHRHADYLAALAARG---EPVEP-YAGYVDAFRHGMPPHGGFAI 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R V  L GA NVREV+ FP
Sbjct: 399 GLERFVARLAGAANVREVTAFP 420



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 122/298 (40%), Gaps = 32/298 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           + VG+ VRL+GWVHR R    + FL +RD  G+ QVV    +   ++        V  + 
Sbjct: 11  ARVGATVRLAGWVHRRRLLKSVAFLIVRDAAGLAQVVVAAPAVREQVEALTEETVVEVVG 70

Query: 75  GLVMSRSA----ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            +V + +A    E +   +            ++        LP   +   P ++R   R 
Sbjct: 71  TVVANPTAPAGVEVVEPTVRPLGPPAVPPPFDLYRPVLTATLPTQLDHA-PVALRHPVRS 129

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
             LR              ++  R  +    F+E  TP + ASS E   +        + +
Sbjct: 130 AALRISAA---------AVSGFRATLDGRGFVEVHTPKVVASSTESGANVFALDWFGRPA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDI 249
           + A  Q+PQ YKQL M   F+R +++ P FR E   + R   ++  LD+E+ FV +  D+
Sbjct: 181 YLA--QSPQFYKQL-MVGVFERVYEVGPVFRAEPHDTVRHLAQYTSLDVELGFVADHRDV 237

Query: 250 LNTMENVLRGVFEEFSN---------GNTVSN---NFLRICYDDAIRRYG--TDKPDL 293
           +  +   L G+               G TV         + + DA++  G   D+PDL
Sbjct: 238 MAVLRETLAGMVATVGERAGGALATLGVTVPEVPAEIPAVHFTDALKIAGAPADEPDL 295


>gi|160939908|ref|ZP_02087255.1| hypothetical protein CLOBOL_04799 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437342|gb|EDP15107.1| hypothetical protein CLOBOL_04799 [Clostridium bolteae ATCC
           BAA-613]
          Length = 654

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 134/287 (46%), Gaps = 32/287 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G    ++G +   R  G   F +++D  G  QV    DS   E  K  +   +  I G+ 
Sbjct: 59  GKEAAIAGRMMFKRVMGKASFCNVQDLKGSIQVYVARDSVGEESYKDFKKMDIGDIVGV- 117

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
              +A T      TG+I + A ++ +LS + + LP    G  +    +R++ R++DL  +
Sbjct: 118 -KGTAFTTK----TGEISIHATEVTLLSKSLQVLPEKFHGLTDT--DMRYRQRYVDLIMN 170

Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              K+  +KR+RI+ ++R  +  E F+E  TP+L +++   A      +R  +  F AL 
Sbjct: 171 AEVKDTFIKRSRILAAIRKYLGGEGFMEVETPMLVSNAGGAA------ARPFETHFNALD 224

Query: 196 Q------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + +
Sbjct: 225 EDLKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGM 283

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           ++  E + R V +E     T++           F RI   DA+++Y 
Sbjct: 284 MDLTEKLYRFVAQEVLGTTTITYKGVEMDLGKPFARITMVDAVKKYA 330



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 28/41 (68%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++ 
Sbjct: 456 ALEVGMPPTGGIGFGIDRMVMLLTDSPAIRDVLLFPTMKSL 496


>gi|312134580|ref|YP_004001918.1| lysyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774631|gb|ADQ04118.1| lysyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 495

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 20/253 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GL 76
           G FV ++G +   R HG   F+DI D  G  Q+    D    E+ +    E+    D G 
Sbjct: 56  GKFVSVAGRMLSKRGHGKASFVDILDTKGKIQIYIKID----EVGEEKYEEFKEYYDIGD 111

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--- 133
           ++    E    +   G+I + A++IE+L+     PLP           R++ R+LDL   
Sbjct: 112 IIGVKGEVFKTH--KGEISIKAKEIEMLTKCLR-PLPEKWHGLKDVDTRYRKRYLDLIVN 168

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
              RDT     +KR+ II S+R  +    F+E  TP+L+  +    AR F+         
Sbjct: 169 PQVRDTF----IKRSLIIRSIRKFLDDRGFLEVETPVLSPIAGGAAARPFITHHNALDID 224

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + + + L+  GFD+ +++   FR+E       P EF  +++  ++ +  D++
Sbjct: 225 LY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEVYQAYADYKDMM 282

Query: 251 NTMENVLRGVFEE 263
           +  E ++  V +E
Sbjct: 283 DLTEELITTVAQE 295



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 454 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFP 489


>gi|126459746|ref|YP_001056024.1| asparaginyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126249467|gb|ABO08558.1| asparaginyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 431

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 19/243 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           + GWV+R R     +FL +RD  G+ Q+V     A F  A+S+  E  L   G++     
Sbjct: 23  VRGWVYRKRTLKEKVFLLLRDATGVIQLVVP--RAKFPEAESLNLESSLVATGVL----- 75

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPL---PVFGEREYPESIRFKYRFLDLRRDTLH 139
             +      G +EL  + I+ + V E  P+       + EY   +R     L LR   + 
Sbjct: 76  --VREPRAPGGVELHVESIDWVYVGEPYPINEDAAVSDSEYLLDVRH----LWLRSRKMQ 129

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             +  R  +  ++        F E   P+   ++ EG          ++  +  L Q+ Q
Sbjct: 130 AILKIRHTVFGAIHDYFRRRGFYEVHPPMFITAAVEGGATLFKVEYFDRTVY--LTQSSQ 187

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+ S  ++ + +AP FR E  R+ R   EF+  +ME+++   DD     E V+  
Sbjct: 188 FYLEALIYS-LEKVYTVAPSFRAEPSRTRRHLTEFWHAEMEIAWAHMDDAAKVGEEVIGH 246

Query: 260 VFE 262
           V E
Sbjct: 247 VVE 249



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 15/86 (17%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPHG 537
           L+  G+ E+  GG R + ++ +++     G++ E  +      R+G +         PH 
Sbjct: 347 LLPEGYGEVIGGGERIYDAKELVEKIIRFGLNPEDYQWYIDLRRYGSV---------PHA 397

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G+DR+VM + GA ++R+V  FP
Sbjct: 398 GFGLGVDRLVMWIAGADHIRDVVPFP 423


>gi|113461618|ref|YP_719687.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|112823661|gb|ABI25750.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 502

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 126/289 (43%), Gaps = 29/289 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCI 73
           G  V+++G +   R  G   F+ ++D  G  Q+    D+    +       W    ++ +
Sbjct: 60  GIEVKVAGRIMTRRVMGKATFITLQDMSGKIQLYVARDNLAEGVYTDDVGNWDLGDIVGV 119

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +             T ++ + A ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 120 KGTLFKTK---------TNELTIRATEVHLLTKALR-PLPNKFHGLSDQETRYRQRYLDL 169

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              +   +  + R+++I  +R   I++ F+E  TP+L    P GA  R F+         
Sbjct: 170 IANEDSRRTFIIRSKVIAGIREYFISKGFMEVETPMLQII-PGGASARPFITHHNALDVD 228

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D++
Sbjct: 229 MY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SIRHNPEFTMLEYYQAYADYHDLM 286

Query: 251 NTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDK 290
           +  E +LR +  +      V            F RI   +AI +YG ++
Sbjct: 287 DNTEELLRKLALDILGTTIVPYGDLKFDFGKPFERITMHEAILKYGAEQ 335



 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536
           +++L   G EI +G    + +E   + F     +KE  ++    +      A + G+PP 
Sbjct: 410 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVTALEHGLPPT 469

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+ ML   A ++R+V LFP
Sbjct: 470 AGEGLGIDRLAMLFANANSIRDVILFP 496


>gi|11513774|pdb|1BBU|A Chain A, Lysyl-Trna Synthetase (Lyss) Complexed With Lysine
 gi|11513776|pdb|1BBW|A Chain A, Lysyl-Trna Synthetase (Lyss)
          Length = 504

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 67  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 124 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 180

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 181 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 239

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 240 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 298

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
            + ++      V+           F ++   +AI++Y   TD  DL N
Sbjct: 299 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 346



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 463 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 498


>gi|302842054|ref|XP_002952571.1| hypothetical protein VOLCADRAFT_62618 [Volvox carteri f.
           nagariensis]
 gi|300262210|gb|EFJ46418.1| hypothetical protein VOLCADRAFT_62618 [Volvox carteri f.
           nagariensis]
          Length = 493

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 133/300 (44%), Gaps = 31/300 (10%)

Query: 5   RTHSCGDL---------GVSD-VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   DL         G  D  G+ V ++G V   R  G + FL +RD  G  Q+    
Sbjct: 30  RTHFTKDLQDLYASLPNGAEDEAGTLVAVAGRVLAKRVMGKLAFLSLRDDKGQIQLYV-- 87

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANII---TGQIELSAQKIEILSVAEELP 111
           D    + +++   E    + GLV        +  +     G++ + A  +++L+ +  LP
Sbjct: 88  DRTRLDASQN---EGFNTVKGLVDVGDIVGCSGTVKRTEKGELSVVATGMQVLTKSL-LP 143

Query: 112 LPVFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
           LP           R++ R+LDL      RDT       R+RII+++R ++    FIE  T
Sbjct: 144 LPDKWHGLSDVEKRYRQRYLDLIMTAEVRDTFRA----RSRIISTLRRQLEDRGFIEVET 199

Query: 167 PIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           P+L + +    AR F      + G    L  A + + + ++  GF+R F++   FR+E  
Sbjct: 200 PVLESVAGGADARPFRTFHN-SLGRDLTLRIATELHLKRMVVGGFERVFELGRVFRNEGL 258

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            S   P EF  +++  ++ + +D++N  E ++R    E      VS   + I +    RR
Sbjct: 259 SSRHNP-EFTSVEIYQAYADYNDMMNLTEELIRVCAMEVRGSAQVSYQGVAIDFSQPFRR 317



 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VMLL  + ++R+V  FP
Sbjct: 455 ALEYGMPPTGGLGIGVDRLVMLLTDSPSIRDVIAFP 490


>gi|66823901|ref|XP_645305.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74857802|sp|Q559M9|SYDC2_DICDI RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic 2; AltName:
           Full=Aspartate--tRNA ligase 2; Short=AspRS 2
 gi|60473358|gb|EAL71304.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 569

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 128/287 (44%), Gaps = 50/287 (17%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA------NPDSACFEIA 62
            DL  S VG +V +   V  +R  G  + FL +RD     Q V       N  S    I 
Sbjct: 86  SDLNESCVGKYVLIRARVSNIRSFGNSLCFLQLRDGLSSIQAVISKNDENNSKSMIHFIN 145

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPV------- 114
            ++  E ++ I+  +++ S+  I + II   +EL    + + S +   LPL         
Sbjct: 146 STITKESIIDIEA-ILTNSSTPIESCIIKN-LELKIYSLFLQSKSNSSLPLQFDDLSKPT 203

Query: 115 ----FGEREY----PESIRFKYRFLDLRRDTLHK-NIVK-RTRIINSMRCRMIAENFIEC 164
               + +  Y    P + R   R LDLR  T +  +I K ++ I N  R +++  +FIE 
Sbjct: 204 TYQNYDDNGYTYVIPLNSRLNNRCLDLR--TFYNLSIFKIQSAISNLFRDQLLINDFIEI 261

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYA--------LPQAPQQYKQLLMASGFDRYFQI 216
            +P +   S            +N+ SF          L ++ Q Y+QL + S F R F+I
Sbjct: 262 HSPKIIKQS------------INENSFKLNYFNEIAYLSESTQFYRQLAIVSDFKRVFEI 309

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
            P +R +   + R   EF  LD EM+F +   ++L+ ++N++  +F+
Sbjct: 310 GPVYRTDLGHTHRHLNEFTSLDFEMTFKDHYHEVLDFLDNLMISIFK 356


>gi|67516065|ref|XP_657918.1| hypothetical protein AN0314.2 [Aspergillus nidulans FGSC A4]
 gi|40746564|gb|EAA65720.1| hypothetical protein AN0314.2 [Aspergillus nidulans FGSC A4]
 gi|259489456|tpe|CBF89742.1| TPA: aspartatyl tRNA synthetase, hypothetical protein (Eurofung)
           [Aspergillus nidulans FGSC A4]
          Length = 956

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 11/177 (6%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSM 152
           +  S  + EI +  E+L   V G R +  +  R   R LDLR  T       ++ + N  
Sbjct: 245 VPFSVYEAEIRTAEEDL---VEGRRSHISDRTRLTNRLLDLRTPTSQSIFRIQSAVCNLF 301

Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
           R  +  + FIE  TP L  ++ E        +   + +F A  Q+PQ  KQ+ +A+ F R
Sbjct: 302 RSALDEQRFIEIHTPKLQGAATESGASVFDVNYFGRDAFLA--QSPQLAKQMAIAADFGR 359

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMS----FVEQDDILNT-MENVLRGVFEEF 264
            ++I   FR E+  + R   E+  LD+EMS    + E  ++L+  ++N+L+G++  +
Sbjct: 360 VYEIGAVFRAENSNTHRHLTEYTGLDIEMSIEEHYHEMLEVLDAVIKNILKGIYTRY 416



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H   ++ +    VGI+ + +E    G    F+ G PPH G   
Sbjct: 517 FDMFIRGQEIVSGGQRIHDPHMLEENMRRVGINPDTMEEYMEG----FRWGAPPHAGAGI 572

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R++ML+L   N+R  S+F
Sbjct: 573 GLERMLMLILKLGNIRLASMF 593


>gi|15803426|ref|NP_289459.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15833016|ref|NP_311789.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168747633|ref|ZP_02772655.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4113]
 gi|168753827|ref|ZP_02778834.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4401]
 gi|168760017|ref|ZP_02785024.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4501]
 gi|168766882|ref|ZP_02791889.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4486]
 gi|168775766|ref|ZP_02800773.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4196]
 gi|168778902|ref|ZP_02803909.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4076]
 gi|168785735|ref|ZP_02810742.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC869]
 gi|168800022|ref|ZP_02825029.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC508]
 gi|195936507|ref|ZP_03081889.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208809534|ref|ZP_03251871.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4206]
 gi|208814126|ref|ZP_03255455.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4045]
 gi|208818755|ref|ZP_03259075.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4042]
 gi|209398148|ref|YP_002272364.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4115]
 gi|217327355|ref|ZP_03443438.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. TW14588]
 gi|254794841|ref|YP_003079678.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261226203|ref|ZP_05940484.1| lysine tRNA synthetase, constitutive [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261256542|ref|ZP_05949075.1| lysine tRNA synthetase, constitutive [Escherichia coli O157:H7 str.
           FRIK966]
 gi|39932437|sp|Q8XD57|SYK1_ECO57 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|12517416|gb|AAG58018.1|AE005519_4 lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation
           in primer RNA [Escherichia coli O157:H7 str. EDL933]
 gi|13363234|dbj|BAB37185.1| lysine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187768800|gb|EDU32644.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4196]
 gi|188017948|gb|EDU56070.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4113]
 gi|189003227|gb|EDU72213.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4076]
 gi|189358608|gb|EDU77027.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4401]
 gi|189363788|gb|EDU82207.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4486]
 gi|189369387|gb|EDU87803.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4501]
 gi|189373868|gb|EDU92284.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC869]
 gi|189377631|gb|EDU96047.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC508]
 gi|208729335|gb|EDZ78936.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4206]
 gi|208735403|gb|EDZ84090.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4045]
 gi|208738878|gb|EDZ86560.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4042]
 gi|209159548|gb|ACI36981.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4115]
 gi|209760608|gb|ACI78616.1| lysine tRNA synthetase [Escherichia coli]
 gi|209760610|gb|ACI78617.1| lysine tRNA synthetase [Escherichia coli]
 gi|209760612|gb|ACI78618.1| lysine tRNA synthetase [Escherichia coli]
 gi|209760616|gb|ACI78620.1| lysine tRNA synthetase [Escherichia coli]
 gi|217319722|gb|EEC28147.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. TW14588]
 gi|254594241|gb|ACT73602.1| lysine tRNA synthetase, constitutive [Escherichia coli O157:H7 str.
           TW14359]
 gi|320189233|gb|EFW63892.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320640533|gb|EFX10072.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320645780|gb|EFX14765.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320651080|gb|EFX19520.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320667171|gb|EFX34134.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|326339027|gb|EGD62842.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326343091|gb|EGD66859.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 505

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
            + ++      V+           F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|170718674|ref|YP_001783868.1| lysyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189082960|sp|B0URW9|SYK_HAES2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|168826803|gb|ACA32174.1| lysyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 502

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 126/289 (43%), Gaps = 29/289 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCI 73
           G  V+++G +   R  G   F+ ++D  G  Q+    D+    +       W    ++ +
Sbjct: 60  GIEVKVAGRIMTRRVMGKATFITLQDMSGKIQLYVARDNLAEGVYTDDVGNWDLGDIVGV 119

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +             T ++ + A ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 120 KGTLFKTK---------TNELTIRATEVHLLTKALR-PLPNKFHGLSDQETRYRQRYLDL 169

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              +   +  + R+++I  +R   I++ F+E  TP+L    P GA  R F+         
Sbjct: 170 IANEDSRRTFIIRSKVIAGIREYFISKGFMEVETPMLQII-PGGASARPFITHHNALDVD 228

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D++
Sbjct: 229 MY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SIRHNPEFTMLEYYQAYADYHDLM 286

Query: 251 NTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDK 290
           +  E +LR +  +      V            F RI   +AI +YG ++
Sbjct: 287 DNTEELLRKLALDILGTTIVPYGDLKFDFGKPFERITMHEAILKYGAEQ 335



 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536
           +++L   G EI +G    + +E   + F     +KE  ++    +      A + G+PP 
Sbjct: 410 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVTALEHGLPPT 469

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+ ML   A ++R+V LFP
Sbjct: 470 AGEGLGIDRLAMLFANANSIRDVILFP 496


>gi|123418390|ref|XP_001305315.1| asparaginyl-tRNA synthetase family protein [Trichomonas vaginalis
           G3]
 gi|121886827|gb|EAX92385.1| asparaginyl-tRNA synthetase family protein [Trichomonas vaginalis
           G3]
          Length = 624

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 117/284 (41%), Gaps = 39/284 (13%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R+ GWVH++  HGGI+FL +RD  G  QV+          A ++  E  + + G V    
Sbjct: 207 RVFGWVHKLSRHGGIMFLTLRDGTGFLQVILEGILTQTTSALTINREATVMVVGKVRE-- 264

Query: 82  AETINANIITGQIELSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
               +   + G+ EL+A   E++  A    + L  P       P+ +      LD R   
Sbjct: 265 ----DKRAVGGK-ELAADYWEMIGNAPSDFDTLTRPDLT----PDLL------LDNRHLV 309

Query: 138 LHKNIVKRTRIINSMRCRMIAENF-----IECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           L       T  +     R+I ENF      E   P L  +  EG           Q ++ 
Sbjct: 310 LRSEFASTTMKVRDHLTRIIRENFYKHDCTEVVCPCLVQTQCEGGATLFGLDFYGQKAY- 368

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   AS  D  F I P FR E  ++ R   EF  ++ E  F++ D++++ 
Sbjct: 369 -LTQSSQLYLETCCASMGD-VFCIEPSFRAEKSKTPRHLCEFTHIEAEYPFIDFDELMSR 426

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +E+++  V           N  L   + D I ++  D   L+ P
Sbjct: 427 IEDMVIAVV----------NGLLESEFKDFILKHNPDLKPLKKP 460


>gi|260061783|ref|YP_003194863.1| lysyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785915|gb|EAR17084.1| lysyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 563

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 135/305 (44%), Gaps = 32/305 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-G 75
           G  V ++G +   R  G   F +++D  G  Q+  N D  C    KS  ++ +   +D G
Sbjct: 46  GKHVVMAGRLMSRRIQGKASFAELQDSAGRIQLYFNRDEICEGEDKSAYNDIYKKLLDIG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP-------VFGEREYPESIRFK 127
            ++    E     +  G+  +  ++  +LS A   LPLP       VF E   PE  R++
Sbjct: 106 DIIGIEGELFKTQV--GEKTVRVKRFTLLSKALRPLPLPKKDAEGKVFDEFNDPEQ-RYR 162

Query: 128 YRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R++DL  +  + +  VKRT+I NS+R     + ++E  TPIL        AR F     
Sbjct: 163 MRYVDLVVNPNVRETFVKRTKITNSIRRFFNEKGYLEVETPILQPIPGGAAARPFQTHHN 222

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  A + Y + L+  GFD  ++ A  FR+E       P EF  +++ +++ +
Sbjct: 223 ALGIPLY-LRIANELYLKRLIVGGFDGVYEFAKDFRNEGMDRTHNP-EFTVMELYVAYKD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY------GTDK 290
            + ++ T E +L  V  E +    VS           + R+   DAIR +      G D+
Sbjct: 281 YNWMMETTEQLLERVAREANGSTRVSAGGETIDFKAPYPRVPILDAIREHTGIDVDGMDE 340

Query: 291 PDLRN 295
             LR+
Sbjct: 341 AALRD 345



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 12/91 (13%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++L+ NG EIA+           R    E +    S  G  + +  +R     RA + G
Sbjct: 405 RFELLVNGKEIANAYSELNDPIDQRERFEEQL--KLSEKGDDEAMFIDR--DFLRALEFG 460

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP  GI  GIDR+VMLL    +++EV  FP
Sbjct: 461 MPPTSGIGIGIDRLVMLLTDNSSIQEVLFFP 491


>gi|193063477|ref|ZP_03044566.1| lysyl-tRNA synthetase LysS [Escherichia coli E22]
 gi|192930754|gb|EDV83359.1| lysyl-tRNA synthetase LysS [Escherichia coli E22]
          Length = 505

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
            + ++      V+           F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|257215914|emb|CAX83109.1| lysyl-tRNA synthetase [Schistosoma japonicum]
          Length = 388

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 117/248 (47%), Gaps = 12/248 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V +SG VH  R  G  +IF DIR      QV+AN      E      +E +   D +  +
Sbjct: 110 VSISGRVHAKRSAGSKLIFYDIRSEDCRLQVMANIRHYKSEAEFHAINEVIHLGDIIGCA 169

Query: 80  RSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
            S          G++ +   +I +LS    +LP   +G ++  +  RF+ R+LDL   + 
Sbjct: 170 GSP----GKSKLGELSIIPHEITLLSPCLYQLPHMHYGVKD--KETRFRQRYLDLLMNEE 223

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
           + +  + R RI+N +R  +    F+E  TP++ T +    A+ F+        + Y +  
Sbjct: 224 VRRRFITRARIVNYVRKFLDDLGFLEVETPMMNTIAGGAAAKPFITYHNELNMNLY-MRV 282

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y ++L+  G +R +++   FR+E       P EF   +  M++ + +D++   E++
Sbjct: 283 APELYLKMLVIGGLNRVYELGRVFRNEGIDLTHNP-EFTSCEFYMAYADYEDLMTITEDL 341

Query: 257 LRGVFEEF 264
           L G+ +  
Sbjct: 342 LSGLVKHL 349


>gi|134299144|ref|YP_001112640.1| asparaginyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|172044276|sp|A4J412|SYN_DESRM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|134051844|gb|ABO49815.1| asparaginyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 429

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 109/242 (45%), Gaps = 21/242 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GW++  R  G I FL +RD  G+ Q  +V       FE+AK +  E  + + G+V 
Sbjct: 17  VSIQGWLYNKRSSGKIQFLIVRDGTGLVQGVLVKKEAPEIFELAKELTQESAIRLRGIVR 76

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                        G  EL+   +EI+++A+E P+     +E+        R L +R  T 
Sbjct: 77  EEPRS-------MGGYELTVTGLEIINLAQEYPI---SHKEHGVDFLMDRRHLWMR--TP 124

Query: 139 HKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +N + R R  I  + R      +F    +PI+T ++ EG           + ++  L Q
Sbjct: 125 RQNAILRIRAEIEQAARDFFNQNDFTLVDSPIITPAACEGTTTLFELDYHGEKAY--LSQ 182

Query: 197 APQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           + Q Y +   MA G  R +   P FR E  ++ R   EF+ ++ E +F + +D +   E 
Sbjct: 183 SGQLYNEASAMAVG--RMYCFGPTFRAEKSKTRRHLMEFWMIEAEAAFFDFEDNMKLQEE 240

Query: 256 VL 257
           ++
Sbjct: 241 MV 242


>gi|323966690|gb|EGB62122.1| lysyl-tRNA synthetase [Escherichia coli M863]
 gi|327251652|gb|EGE63338.1| lysyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 505

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNDQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
            + ++      V+           F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|170766125|ref|ZP_02900936.1| lysyl-tRNA synthetase LysS [Escherichia albertii TW07627]
 gi|170125271|gb|EDS94202.1| lysyl-tRNA synthetase LysS [Escherichia albertii TW07627]
          Length = 505

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
            + ++      V+           F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F +   +KE  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFQDQVAAKEAGDDEAMFYDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|46906461|ref|YP_012850.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|226222857|ref|YP_002756964.1| lysyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254826414|ref|ZP_05231415.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254854616|ref|ZP_05243964.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254933690|ref|ZP_05267049.1| lysyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|254992593|ref|ZP_05274783.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|300766503|ref|ZP_07076451.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|67461802|sp|Q724I4|SYK_LISMF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|46879725|gb|AAT03027.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|225875319|emb|CAS04016.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP
           80459]
 gi|258608011|gb|EEW20619.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293585254|gb|EFF97286.1| lysyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293595655|gb|EFG03416.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300512785|gb|EFK39884.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|332310639|gb|EGJ23734.1| Lysyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 498

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 154/356 (43%), Gaps = 45/356 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F  I+D +   Q+    D+    I +   + + L   G ++  
Sbjct: 63  VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKLADLGDIIGI 118

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                  N  TG++ + A +  +LS +   LP    G ++  +  R++ R+LDL  +   
Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           +N  V R++I+   R  M  + F+E  TP+L T +    A+ F+          Y L  A
Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++ +E ++
Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292

Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-------GTDKPDLRNPIIMH 300
             V ++  NG T          ++ N+ RI   DA++ Y        T   + R     H
Sbjct: 293 STVCKQV-NGTTEITYGEYNVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEARELAKKH 351

Query: 301 N--VTEHFVHSE-----FRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343
           N  VTEH  +       F  + +   + P + V+  P      AK    +  F DR
Sbjct: 352 NVPVTEHMTYGHILNEFFETYVEEKLIQPTF-VYGHPVEISPLAKKNKEDDRFTDR 406



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG+  GIDR+VMLL  A ++R++ LFP  ++
Sbjct: 457 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 496


>gi|197117272|ref|YP_002137699.1| asparaginyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197086632|gb|ACH37903.1| asparaginyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 461

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 29/273 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L     G  + L GW   VR   G+ F+ + D   +   QVVA P+ A +   
Sbjct: 4   RTRVKQALSEGRPGETLLLKGWARTVRTGKGVTFISLNDGSTLAGIQVVAEPELANYAEV 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYP 121
            ++ +   L + G++    A         GQ +EL A  +E++  A++   P+  +R   
Sbjct: 64  AALGTGSALTVTGVLQESPA--------AGQELELKALSVEVVGTADQ-EYPMQKKRHSF 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R     + +R +T       R+ +   +        F+   TPI+TA+  EGA +  
Sbjct: 115 EYLR-TIAHMRVRSNTFGAVFRVRSALAQEVHRFFAERGFLYVHTPIITANDCEGAGELF 173

Query: 182 V--------PSRVN-----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDP 225
                    P RV         F+A         QL   L A  F   +   P FR E+ 
Sbjct: 174 RVTTLDLNNPPRVEGEIDFAQDFFAKATGLTVSGQLEGELFAQAFSDIYTFGPTFRAENS 233

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            + R   EF+ ++ EM+F +  D  +  E  L+
Sbjct: 234 NTARHAAEFWMIEPEMAFADLSDDADLAEAFLK 266



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    E ++     VGI  E +           + G  PH G   G 
Sbjct: 378 LVPKVGEIIGGSQREERLEPLIGRMMEVGIEPESL----SWYLDTRRWGSTPHAGFGLGF 433

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R++M L G +N+R+V  FP +
Sbjct: 434 ERLIMYLTGMENIRDVIPFPRT 455


>gi|24114145|ref|NP_708655.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30064202|ref|NP_838373.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|74313449|ref|YP_311868.1| lysyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|110806794|ref|YP_690314.1| lysyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|157155962|ref|YP_001464228.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
 gi|187730899|ref|YP_001881660.1| lysyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|191165971|ref|ZP_03027807.1| lysyl-tRNA synthetase LysS [Escherichia coli B7A]
 gi|193070569|ref|ZP_03051508.1| lysyl-tRNA synthetase LysS [Escherichia coli E110019]
 gi|194426362|ref|ZP_03058917.1| lysyl-tRNA synthetase LysS [Escherichia coli B171]
 gi|218555438|ref|YP_002388351.1| lysyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218696485|ref|YP_002404152.1| lysyl-tRNA synthetase [Escherichia coli 55989]
 gi|256019312|ref|ZP_05433177.1| lysyl-tRNA synthetase [Shigella sp. D9]
 gi|260845558|ref|YP_003223336.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O103:H2
           str. 12009]
 gi|260869567|ref|YP_003235969.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O111:H-
           str. 11128]
 gi|293449212|ref|ZP_06663633.1| lysyl-tRNA synthetase [Escherichia coli B088]
 gi|300815659|ref|ZP_07095883.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300820693|ref|ZP_07100844.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300906561|ref|ZP_07124252.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|301303047|ref|ZP_07209174.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301327290|ref|ZP_07220546.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|307310491|ref|ZP_07590139.1| lysyl-tRNA synthetase [Escherichia coli W]
 gi|309793961|ref|ZP_07688386.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|331654387|ref|ZP_08355387.1| lysine--tRNA ligase [Escherichia coli M718]
 gi|331669624|ref|ZP_08370470.1| lysine--tRNA ligase [Escherichia coli TA271]
 gi|331678876|ref|ZP_08379550.1| lysine--tRNA ligase [Escherichia coli H591]
 gi|332280426|ref|ZP_08392839.1| lysyl-tRNA synthetase [Shigella sp. D9]
 gi|39932371|sp|Q83JU6|SYK1_SHIFL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123047932|sp|Q0T106|SYK_SHIF8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238691768|sp|B2U0Q7|SYK_SHIB3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|24053284|gb|AAN44362.1| lysine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30042459|gb|AAP18183.1| lysine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|73856926|gb|AAZ89633.1| lysine tRNA synthetase, constitutive [Shigella sonnei Ss046]
 gi|110616342|gb|ABF05009.1| lysine tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|157077992|gb|ABV17700.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
 gi|187427891|gb|ACD07165.1| lysyl-tRNA synthetase LysS [Shigella boydii CDC 3083-94]
 gi|190903919|gb|EDV63632.1| lysyl-tRNA synthetase LysS [Escherichia coli B7A]
 gi|192956152|gb|EDV86616.1| lysyl-tRNA synthetase LysS [Escherichia coli E110019]
 gi|194415670|gb|EDX31937.1| lysyl-tRNA synthetase LysS [Escherichia coli B171]
 gi|218353217|emb|CAU99132.1| lysine tRNA synthetase, constitutive [Escherichia coli 55989]
 gi|218362206|emb|CAQ99824.1| lysine tRNA synthetase, constitutive [Escherichia coli IAI1]
 gi|257760705|dbj|BAI32202.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O103:H2
           str. 12009]
 gi|257765923|dbj|BAI37418.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O111:H-
           str. 11128]
 gi|281602222|gb|ADA75206.1| Lysyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|291322302|gb|EFE61731.1| lysyl-tRNA synthetase [Escherichia coli B088]
 gi|300401600|gb|EFJ85138.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300526957|gb|EFK48026.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300531588|gb|EFK52650.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300841711|gb|EFK69471.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300846153|gb|EFK73913.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|306909386|gb|EFN39881.1| lysyl-tRNA synthetase [Escherichia coli W]
 gi|308122368|gb|EFO59630.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|313647929|gb|EFS12375.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|315062194|gb|ADT76521.1| lysine tRNA synthetase, constitutive [Escherichia coli W]
 gi|315256772|gb|EFU36740.1| lysyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|320175923|gb|EFW51001.1| lysyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320184567|gb|EFW59368.1| lysyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320202549|gb|EFW77119.1| lysyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323162520|gb|EFZ48370.1| lysyl-tRNA synthetase [Escherichia coli E128010]
 gi|323167905|gb|EFZ53595.1| lysyl-tRNA synthetase [Shigella sonnei 53G]
 gi|323173887|gb|EFZ59516.1| lysyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323180333|gb|EFZ65885.1| lysyl-tRNA synthetase [Escherichia coli 1180]
 gi|323183443|gb|EFZ68840.1| lysyl-tRNA synthetase [Escherichia coli 1357]
 gi|323377222|gb|ADX49490.1| lysyl-tRNA synthetase [Escherichia coli KO11]
 gi|323946625|gb|EGB42648.1| lysyl-tRNA synthetase [Escherichia coli H120]
 gi|324119930|gb|EGC13809.1| lysyl-tRNA synthetase [Escherichia coli E1167]
 gi|331047769|gb|EGI19846.1| lysine--tRNA ligase [Escherichia coli M718]
 gi|331063292|gb|EGI35205.1| lysine--tRNA ligase [Escherichia coli TA271]
 gi|331073706|gb|EGI45027.1| lysine--tRNA ligase [Escherichia coli H591]
 gi|332102778|gb|EGJ06124.1| lysyl-tRNA synthetase [Shigella sp. D9]
 gi|332752926|gb|EGJ83310.1| lysyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|332753725|gb|EGJ84104.1| lysyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332754304|gb|EGJ84670.1| lysyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332765820|gb|EGJ96033.1| lysyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|332999678|gb|EGK19263.1| lysyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333000273|gb|EGK19856.1| lysyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333000724|gb|EGK20299.1| lysyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333015180|gb|EGK34523.1| lysyl-tRNA synthetase [Shigella flexneri K-304]
 gi|333015220|gb|EGK34562.1| lysyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 505

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
            + ++      V+           F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|297616356|ref|YP_003701515.1| lysyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144193|gb|ADI00950.1| lysyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 487

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 136/294 (46%), Gaps = 29/294 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEIAKSVRSEWVLCID 74
           G  VR++G +   R HG   F +++D  G  Q+   + +  +  +E+ KS+    ++ ++
Sbjct: 49  GQAVRIAGRIMARRTHGKAGFANLQDQSGQIQLYFRLNDLGAEKYELFKSMDIGDIIGVE 108

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL 133
           G V            +T   E++    +++ +A+ L PLP          +R++ R++DL
Sbjct: 109 GTV-----------FLTKTQEITVHVQDLVYLAKALNPLPEKWHGLKDVELRYRQRYVDL 157

Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   + + VKR++II  MR  +    F+E  TP++        AR F+          
Sbjct: 158 IVNPPVREVFVKRSQIIREMRRYLDERGFLEVETPMMQPIPGGAAARPFITHHNALGIDL 217

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF++ ++I   FR+E   +   P EF  L++  ++ +  D++ 
Sbjct: 218 Y-LRIAPELYLKRLLVGGFEKVYEINRNFRNEGISTKHNP-EFTMLELYQAYADFQDMMR 275

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYD---------DAIRRY-GTDKPDLRN 295
             E+++  V +       V     R+ +          +A+++Y G D  DL++
Sbjct: 276 LTEDLISSVVKSVFGTMVVEYQGSRLDFTPPWQRLPMLEAVKKYAGVDFTDLKS 329



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 446 ALEYGMPPAGGLGIGIDRLVMLLTDSPSIRDVILFP 481


>gi|116328519|ref|YP_798239.1| asparaginyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331247|ref|YP_800965.1| asparaginyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281007|sp|Q04SB3|SYN_LEPBJ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|122283693|sp|Q050D9|SYN_LEPBL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116121263|gb|ABJ79306.1| Asparagine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124936|gb|ABJ76207.1| Asparagine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 435

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 24/259 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
           V + GWVH +R      F+ +R+   I QV+A  +      F+  K +R E  + + G +
Sbjct: 20  VVIQGWVHGIRGSNARQFISLRNGGRILQVLAEKEILGEEVFQTVKHLRQETSVSVAGTL 79

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +     ++         EL   +I I+  +E  P+     +E+        R L LR   
Sbjct: 80  VKNEKSSVG-------FELIMDRIRIVGESENYPIT---PKEHGIDFLISQRHLWLRSSK 129

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  ++R      +F+   TPILT S  E A         + G+ Y L Q 
Sbjct: 130 QLAILRVRDNLSFAIRKYFHERDFLLIDTPILTGSVGESAGTLFSTEYFDLGNAY-LAQT 188

Query: 198 PQQYKQLLMASGF--DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            Q Y   L A+ F  ++ F   P FR E  ++ R   EF+ ++ E++F    D L   E+
Sbjct: 189 GQLY---LEAAIFAHNKVFCYGPTFRAEKSKTRRHLTEFWMVEAEVAFAGHADNLKLQED 245

Query: 256 VLRGVFEEFSNGNTVSNNF 274
            ++ V +E     TV N+ 
Sbjct: 246 FVKTVIKE-----TVQNSL 259


>gi|319939057|ref|ZP_08013421.1| asparaginyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319812107|gb|EFW08373.1| asparaginyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 448

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 111/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-----------FEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA   +             F I K +
Sbjct: 15  VGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFLEKFGEEEGLNKFNIIKHL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  NQETAVLVKGIVKEDERSKFG-------YELDVTDIEIVGESNDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDHRHLWLRSRKQMAIMQIRNAIIYASYEFFDRNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E  
Sbjct: 181 --ETDYFGTPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYP 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           FV  D+ L+  E     +++GV +   +               V+  F RI YD+ I
Sbjct: 239 FVTHDESLDLQEAYVKALIQGVLDRAPHALEVLERDTDLLKKYVAEPFKRISYDEVI 295


>gi|255030315|ref|ZP_05302266.1| lysyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 484

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 155/358 (43%), Gaps = 49/358 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F  I+D +   Q+    D+    I +   + + L   G ++  
Sbjct: 63  VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKLADLGDIIGI 118

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                  N  TG++ + A +  +LS +   LP    G ++  +  R++ R+LDL  +   
Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           +N  V R++I+   R  M  + F+E  TP+L T +    A+ F+          Y L  A
Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++ +E ++
Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292

Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD---------------KP 291
             V ++  NG T          ++ N+ RI   DA++ Y G D               K 
Sbjct: 293 STVCKQV-NGTTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEARELAKKH 351

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343
           D+  P+  H    H ++  F  + +   + P + V+  P      AK    +  F DR
Sbjct: 352 DV--PVTEHMTYGHILNEFFETYVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406


>gi|254669925|emb|CBA04495.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 503

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 134/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHP-IPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                 S Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDISLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    +S N         F R+   +AI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTAKISYNGKEVDLESPFERLTILEAIKKY 335



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  E   + F +    K+  ++    +   Y RA + G+PP 
Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|56750719|ref|YP_171420.1| asparaginyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|56685678|dbj|BAD78900.1| asparaginyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
          Length = 462

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 125/307 (40%), Gaps = 50/307 (16%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCID 74
           G  V + GW+   R      F+++ D   +   QVV   + A +E +AK + +   + ++
Sbjct: 16  GQTVVVRGWIRTARQLKEFTFVEVNDGSCLKGIQVVLGQELADYEMLAKQLDTGAAIAVE 75

Query: 75  GLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           G +++  A+        GQ +EL A  +EI+  A+    P+  +R   E +R     L  
Sbjct: 76  GQLVASPAK--------GQRVELQAASVEIVGGADPEQYPLQKKRHSFEFLR-TIAHLRP 126

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R ++L   +  R     ++        F+   TPI+TAS  EGA +    + ++      
Sbjct: 127 RTNSLGAVMRVRNAAATAIHDFFQERGFLWVHTPIITASDCEGAGELFTVTNLDLDKLGQ 186

Query: 194 LPQAPQ----------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
             QAP                 Q +  +M  GF   +   P FR E+  + R   EF+ +
Sbjct: 187 SQQAPDFEQDFFGKRAYLTVSGQLEAEIMGLGFSNVYTFGPTFRAENSNTSRHLAEFWMV 246

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLR 276
           + E +F +    ++  E  L+ VF+  S+                        ++N+F R
Sbjct: 247 EPETAFCDLGGDMDLAEAFLKFVFQRVSDRCSEDLEFFNQRIDSEVLNRAETILNNDFER 306

Query: 277 ICYDDAI 283
           + Y DAI
Sbjct: 307 VSYTDAI 313


>gi|24379727|ref|NP_721682.1| asparaginyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|290580275|ref|YP_003484667.1| putative asparaginyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|38258370|sp|Q8DTM2|SYN_STRMU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|24377687|gb|AAN58988.1|AE014965_9 putative asparaginyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|254997174|dbj|BAH87775.1| putative asparaginyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 448

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 111/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDS----------ACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F   K +
Sbjct: 15  VGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKFGEEAGLEKFNTIKHL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + I G+V                 EL A  ++++  ++  P+     +E+     
Sbjct: 75  NQETAIEIKGIVKEDKRSKFG-------YELDATDLKVIGTSDNYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR       +  R  +I +         F++  +PIL+ ++ E   D      
Sbjct: 125 MDHRHLWLRSRKQMAIMQIRNAVIYASYEFFDQNGFVKFDSPILSGNAAENTTDLF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G   F R F   P FR E  ++ R   EF+ +D E  
Sbjct: 181 --ETDYFGEPAFLSQSGQLYLEAGAMAFGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYP 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  +  L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FMSHEQSLDLQEAYVKTLIQGVLDRAPQALGILERDTDLLRKYIAQPFKRVSYDDAI 295


>gi|320105485|ref|YP_004181075.1| asparaginyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319924006|gb|ADV81081.1| asparaginyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 455

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 16/245 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWVLCI 73
           G  V L GW++ +R  G ++F   RD  G  Q +  P +A     FE  K++  E  + +
Sbjct: 21  GQSVTLRGWLYNLRASGKLLFPIFRDGTGTIQGIV-PKAAVPEEVFETLKNLTLESSVIV 79

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132
            G V + S             EL  + +++L  V +  P P+   +E+      ++R L 
Sbjct: 80  TGKVRADSRAP-------SGFELDVEDVQVLQRVDDATPFPI-TLKEHGVDFLMEHRHLW 131

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R       +  R  I+ +         F     PILT ++ EG  +       +QG+ Y
Sbjct: 132 MRTPRQSAILRVRATIMRAAAEYFDTNGFTRTDPPILTPNACEGTSELFEMEYFDQGNAY 191

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E++F+E D +++ 
Sbjct: 192 -LTQSGQLYIEA-TALALGKVYSFGPTFRAEKSKTRRHLTEFWMIEPEVAFLELDGLMDL 249

Query: 253 MENVL 257
            E  L
Sbjct: 250 SEAFL 254


>gi|260857013|ref|YP_003230904.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O26:H11
           str. 11368]
 gi|257755662|dbj|BAI27164.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O26:H11
           str. 11368]
 gi|323154770|gb|EFZ40968.1| lysyl-tRNA synthetase [Escherichia coli EPECa14]
          Length = 505

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
            + ++      V+           F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|172041369|ref|YP_001801083.1| lysyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|171852673|emb|CAQ05649.1| lysyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
          Length = 515

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 134/314 (42%), Gaps = 40/314 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           D+G  +  S V ++G V  VR  G + F  ++D  G TQ+      A  EI       W 
Sbjct: 62  DVG-EETDSVVGVAGRVMFVRNTGKLAFATLQDGDG-TQLQVMLSQA--EIGAEALDRWK 117

Query: 71  LCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
             +D G ++      I++    G++ + AQ+  + + A   PLPV   +E  E  R ++R
Sbjct: 118 AEVDLGDIVFAKGRVISSR--RGELSVMAQEWTMAAKALR-PLPV-AHKEMSEDARVRHR 173

Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187
           + DL  R+   KN + R +++ ++R  +    F E  TP+L T      AR F+  S   
Sbjct: 174 YTDLIMREEARKNAMTRIKVMRALRHALERRGFNELETPMLQTLHGGAAARPFVTHSNAL 233

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y +  +  G DR F+I   FR+E       P EF  L+         
Sbjct: 234 DIDLY-LRIAPELYLKRAVVGGLDRVFEINRNFRNEGIDRSHSP-EFAMLE--------- 282

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
                        ++ + + NT +     +  + A   +GT K      + MH+ TE+ +
Sbjct: 283 ------------TYQAYGDYNTAATMTREVIQEVAEEVFGTTK------LTMHDGTEYDL 324

Query: 308 HSEFRVFSKILSVN 321
             E+ V     S+N
Sbjct: 325 GGEWPVIEVYPSLN 338



 Score = 40.4 bits (93), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        I+    E   +  +       V++  F    +A + GM
Sbjct: 424 KWDLYLRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMVLDEDF---LQAMEQGM 480

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   G+DR++M   G   +RE  LFP+
Sbjct: 481 PPTAGTGMGLDRLLMAFTGL-GIRETVLFPL 510


>gi|16130792|ref|NP_417366.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
           substr. MG1655]
 gi|26249304|ref|NP_755344.1| lysyl-tRNA synthetase [Escherichia coli CFT073]
 gi|89109669|ref|AP_003449.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
           substr. W3110]
 gi|91212268|ref|YP_542254.1| lysyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110643038|ref|YP_670768.1| lysyl-tRNA synthetase [Escherichia coli 536]
 gi|117625121|ref|YP_854109.1| lysyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|157162350|ref|YP_001459668.1| lysyl-tRNA synthetase [Escherichia coli HS]
 gi|170018864|ref|YP_001723818.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|170082451|ref|YP_001731771.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
           substr. DH10B]
 gi|188493495|ref|ZP_03000765.1| lysyl-tRNA synthetase LysS [Escherichia coli 53638]
 gi|191173251|ref|ZP_03034782.1| lysyl-tRNA synthetase [Escherichia coli F11]
 gi|194436902|ref|ZP_03069002.1| lysyl-tRNA synthetase LysS [Escherichia coli 101-1]
 gi|209920344|ref|YP_002294428.1| lysyl-tRNA synthetase [Escherichia coli SE11]
 gi|218559883|ref|YP_002392796.1| lysyl-tRNA synthetase [Escherichia coli S88]
 gi|218691015|ref|YP_002399227.1| lysyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218701599|ref|YP_002409228.1| lysyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218706396|ref|YP_002413915.1| lysyl-tRNA synthetase [Escherichia coli UMN026]
 gi|227888438|ref|ZP_04006243.1| lysine tRNA synthetase, constitutive [Escherichia coli 83972]
 gi|237706467|ref|ZP_04536948.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|238902015|ref|YP_002927811.1| lysine tRNA synthetase, constitutive [Escherichia coli BW2952]
 gi|253772269|ref|YP_003035100.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254037933|ref|ZP_04871991.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|254162802|ref|YP_003045910.1| lysyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256024600|ref|ZP_05438465.1| lysyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|291284210|ref|YP_003501028.1| Lysyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|293406388|ref|ZP_06650314.1| lysyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293412248|ref|ZP_06654971.1| lysyl-tRNA synthetase [Escherichia coli B354]
 gi|293416143|ref|ZP_06658783.1| lysyl-tRNA synthetase [Escherichia coli B185]
 gi|298382124|ref|ZP_06991721.1| lysS [Escherichia coli FVEC1302]
 gi|300896215|ref|ZP_07114764.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300925130|ref|ZP_07141044.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300928175|ref|ZP_07143717.1| lysyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300947610|ref|ZP_07161782.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300954271|ref|ZP_07166734.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300980317|ref|ZP_07174971.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300995679|ref|ZP_07181207.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|301027418|ref|ZP_07190755.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|301027813|ref|ZP_07191118.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301049327|ref|ZP_07196297.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|301643761|ref|ZP_07243799.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|306812208|ref|ZP_07446406.1| lysyl-tRNA synthetase [Escherichia coli NC101]
 gi|307139577|ref|ZP_07498933.1| lysyl-tRNA synthetase [Escherichia coli H736]
 gi|312972869|ref|ZP_07787042.1| lysyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|331643579|ref|ZP_08344710.1| lysine--tRNA ligase [Escherichia coli H736]
 gi|331648635|ref|ZP_08349723.1| lysine--tRNA ligase [Escherichia coli M605]
 gi|331659019|ref|ZP_08359961.1| lysine--tRNA ligase [Escherichia coli TA206]
 gi|331664462|ref|ZP_08365368.1| lysine--tRNA ligase [Escherichia coli TA143]
 gi|331684515|ref|ZP_08385107.1| lysine--tRNA ligase [Escherichia coli H299]
 gi|67473140|sp|P0A8N3|SYK1_ECOLI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|67473141|sp|P0A8N4|SYK1_ECOL6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|26109712|gb|AAN81917.1|AE016766_5 Lysyl-tRNA synthetase [Escherichia coli CFT073]
 gi|146341|gb|AAA23959.1| herC protein [Escherichia coli]
 gi|887840|gb|AAA83071.1| lysyl tRNA synthetase (LysRS), constitutive [Escherichia coli]
 gi|1789256|gb|AAC75928.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
           substr. MG1655]
 gi|85675702|dbj|BAE76955.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K12
           substr. W3110]
 gi|91073842|gb|ABE08723.1| lysine tRNA synthetase [Escherichia coli UTI89]
 gi|110344630|gb|ABG70867.1| lysyl-tRNA synthetase [Escherichia coli 536]
 gi|115514245|gb|ABJ02320.1| lysine tRNA synthetase, constitutive [Escherichia coli APEC O1]
 gi|157068030|gb|ABV07285.1| lysyl-tRNA synthetase [Escherichia coli HS]
 gi|169753792|gb|ACA76491.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|169890286|gb|ACB03993.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
           substr. DH10B]
 gi|188488694|gb|EDU63797.1| lysyl-tRNA synthetase LysS [Escherichia coli 53638]
 gi|190906502|gb|EDV66110.1| lysyl-tRNA synthetase [Escherichia coli F11]
 gi|194424384|gb|EDX40371.1| lysyl-tRNA synthetase LysS [Escherichia coli 101-1]
 gi|209760614|gb|ACI78619.1| lysine tRNA synthetase [Escherichia coli]
 gi|209913603|dbj|BAG78677.1| lysyl-tRNA synthase [Escherichia coli SE11]
 gi|218366652|emb|CAR04406.1| lysine tRNA synthetase, constitutive [Escherichia coli S88]
 gi|218371585|emb|CAR19424.1| lysine tRNA synthetase, constitutive [Escherichia coli IAI39]
 gi|218428579|emb|CAR09360.1| lysine tRNA synthetase, constitutive [Escherichia coli ED1a]
 gi|218433493|emb|CAR14396.1| lysine tRNA synthetase, constitutive [Escherichia coli UMN026]
 gi|222034585|emb|CAP77327.1| Lysyl-tRNA synthetase [Escherichia coli LF82]
 gi|226839557|gb|EEH71578.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|226899507|gb|EEH85766.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|227834707|gb|EEJ45173.1| lysine tRNA synthetase, constitutive [Escherichia coli 83972]
 gi|238861694|gb|ACR63692.1| lysine tRNA synthetase, constitutive [Escherichia coli BW2952]
 gi|242378422|emb|CAQ33202.1| lysyl tRNA synthetase (LysRSs), constitutive, subunit of lysyl-tRNA
           synthetase, constitutive [Escherichia coli BL21(DE3)]
 gi|253323313|gb|ACT27915.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974703|gb|ACT40374.1| lysine tRNA synthetase, constitutive [Escherichia coli B str.
           REL606]
 gi|253978869|gb|ACT44539.1| lysine tRNA synthetase, constitutive [Escherichia coli BL21(DE3)]
 gi|260448064|gb|ACX38486.1| lysyl-tRNA synthetase [Escherichia coli DH1]
 gi|281179895|dbj|BAI56225.1| lysyl-tRNA synthetase [Escherichia coli SE15]
 gi|284922838|emb|CBG35927.1| lysyl-tRNA synthetase [Escherichia coli 042]
 gi|290764083|gb|ADD58044.1| Lysyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|291426394|gb|EFE99426.1| lysyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291432332|gb|EFF05314.1| lysyl-tRNA synthetase [Escherichia coli B185]
 gi|291469019|gb|EFF11510.1| lysyl-tRNA synthetase [Escherichia coli B354]
 gi|294492859|gb|ADE91615.1| lysyl-tRNA synthetase LysS [Escherichia coli IHE3034]
 gi|298277264|gb|EFI18780.1| lysS [Escherichia coli FVEC1302]
 gi|299879075|gb|EFI87286.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300298926|gb|EFJ55311.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300304787|gb|EFJ59307.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300318732|gb|EFJ68516.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300359949|gb|EFJ75819.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300394926|gb|EFJ78464.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300409325|gb|EFJ92863.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300418732|gb|EFK02043.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300452807|gb|EFK16427.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300463815|gb|EFK27308.1| lysyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|301077860|gb|EFK92666.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|305854246|gb|EFM54684.1| lysyl-tRNA synthetase [Escherichia coli NC101]
 gi|307554866|gb|ADN47641.1| lysine tRNA synthetase [Escherichia coli ABU 83972]
 gi|307625537|gb|ADN69841.1| lysyl-tRNA synthetase [Escherichia coli UM146]
 gi|309703250|emb|CBJ02585.1| lysyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310332811|gb|EFQ00025.1| lysyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|312947423|gb|ADR28250.1| lysyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315137489|dbj|BAJ44648.1| lysyl-tRNA synthetase [Escherichia coli DH1]
 gi|315289448|gb|EFU48843.1| lysyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315293878|gb|EFU53230.1| lysyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315295677|gb|EFU54997.1| lysyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|315614955|gb|EFU95593.1| lysyl-tRNA synthetase [Escherichia coli 3431]
 gi|320195008|gb|EFW69637.1| lysyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|320656576|gb|EFX24472.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320662096|gb|EFX29497.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|323935879|gb|EGB32178.1| lysyl-tRNA synthetase [Escherichia coli E1520]
 gi|323941590|gb|EGB37770.1| lysyl-tRNA synthetase [Escherichia coli E482]
 gi|323951672|gb|EGB47547.1| lysyl-tRNA synthetase [Escherichia coli H252]
 gi|323957390|gb|EGB53112.1| lysyl-tRNA synthetase [Escherichia coli H263]
 gi|323960814|gb|EGB56435.1| lysyl-tRNA synthetase [Escherichia coli H489]
 gi|324005541|gb|EGB74760.1| lysyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|324011761|gb|EGB80980.1| lysyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|324017286|gb|EGB86505.1| lysyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|330908922|gb|EGH37436.1| lysyl-tRNA synthetase (class 2) [Escherichia coli AA86]
 gi|331037050|gb|EGI09274.1| lysine--tRNA ligase [Escherichia coli H736]
 gi|331042382|gb|EGI14524.1| lysine--tRNA ligase [Escherichia coli M605]
 gi|331053601|gb|EGI25630.1| lysine--tRNA ligase [Escherichia coli TA206]
 gi|331058393|gb|EGI30374.1| lysine--tRNA ligase [Escherichia coli TA143]
 gi|331078130|gb|EGI49336.1| lysine--tRNA ligase [Escherichia coli H299]
 gi|332344785|gb|AEE58119.1| lysyl-tRNA synthetase LysS [Escherichia coli UMNK88]
          Length = 505

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
            + ++      V+           F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|300936045|ref|ZP_07150993.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300458837|gb|EFK22330.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1]
          Length = 505

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNDQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
            + ++      V+           F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|218550137|ref|YP_002383928.1| lysyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|218357678|emb|CAQ90319.1| lysine tRNA synthetase, constitutive [Escherichia fergusonii ATCC
           35469]
 gi|323978819|gb|EGB73900.1| lysyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324115094|gb|EGC09059.1| lysyl-tRNA synthetase [Escherichia fergusonii B253]
 gi|325498451|gb|EGC96310.1| lysyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 505

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNDQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
            + ++      V+           F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|47093173|ref|ZP_00230948.1| lysyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|47018480|gb|EAL09238.1| lysyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|328467946|gb|EGF38976.1| lysyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 498

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 154/356 (43%), Gaps = 45/356 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F  I+D +   Q+    D+    I +   + + L   G ++  
Sbjct: 63  VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKLADLGDIIGI 118

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                  N  TG++ + A +  +LS +   LP    G ++  +  R++ R+LDL  +   
Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           +N  V R++I+   R  M  + F+E  TP+L T +    A+ F+          Y L  A
Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++ +E ++
Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292

Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-------GTDKPDLRNPIIMH 300
             V ++  NG T          ++ N+ RI   DA++ Y        T   + R     H
Sbjct: 293 STVCKQV-NGTTEITYGEYNVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEARELAKKH 351

Query: 301 N--VTEHFVHSE-----FRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343
           N  VTEH  +       F  + +   + P + V+  P      AK    +  F DR
Sbjct: 352 NVPVTEHMTYGHILNEFFETYVEEKLIQPTF-VYGHPVEISPLAKKNKEDDRFTDR 406



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL  A ++R++ LFP
Sbjct: 457 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFP 492


>gi|332707301|ref|ZP_08427354.1| asparaginyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332354035|gb|EGJ33522.1| asparaginyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 462

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 124/303 (40%), Gaps = 52/303 (17%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLVMS 79
           + GWV   R      F+++ D   +   QVV NPD + +E I K + +   + + G+++ 
Sbjct: 21  IQGWVRTKRELKDFAFMEVNDGSSMANLQVVLNPDLSDYETILKRLNTGSSVEVTGILVE 80

Query: 80  RSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                   ++  GQ IE+ A  + +   A+    P+  +R   E +R     L  R +TL
Sbjct: 81  --------SLGKGQRIEVKASSVTVYGEADA-NYPLQKKRHSFEFLR-TISHLRSRTNTL 130

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVNQG 189
                 R    N++        F+   TPI+TAS  EGA +           +P   NQ 
Sbjct: 131 GAVFRVRNACSNAIHQFFQERGFLWVHTPIITASDCEGAGELFSVTNLDLKNIPKTDNQA 190

Query: 190 -----SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 F+  P       QL   +MA  F   +   P FR E+  + R   EF+ ++ EM
Sbjct: 191 VDYTQDFFGRPTYLTVSGQLEAEIMAMAFRDVYTFGPTFRAENSNTSRHLAEFWMVEPEM 250

Query: 242 SFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRICYD 280
           +F +    ++  E  L+ VF+          EF N            N ++N F RI Y 
Sbjct: 251 AFCDLKGDMDLAEAFLKHVFKSVLENCPEDLEFFNKRIDNNVLATADNIINNQFERITYT 310

Query: 281 DAI 283
           DAI
Sbjct: 311 DAI 313


>gi|260578417|ref|ZP_05846331.1| lysine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603439|gb|EEW16702.1| lysine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 535

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 145/342 (42%), Gaps = 34/342 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G +  +R  G + F  ++D  G TQ+ A    A  E+ +   + W   +D G  + 
Sbjct: 83  VSVTGRLIFMRNTGKLCFATLQDGDG-TQLQAMLSLA--EVGEDALAAWKADVDLGDFIG 139

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEEL-PLPV-FGEREYPESIRFKYRFLDL-RRD 136
            +   I +     + ELS    E +  A+ L PLPV F E    E  R + R+ DL  R+
Sbjct: 140 VTGRVIASR----RGELSVMASEWVMAAKALRPLPVAFAE--MNEETRVRQRYNDLIVRE 193

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
              KN + R ++I ++R  M  E F+E  TP+L T      AR F+  S       Y L 
Sbjct: 194 EARKNAMTRVKVIRALRDYMEGEGFVEIETPMLQTLHGGAAARPFVTHSNALDIDLY-LR 252

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ + +  +  G DR F+I   FR+E       P EF  L+   ++ + DD   T   
Sbjct: 253 IAPELFLKRAVVGGIDRVFEINRNFRNEGVDKSHSP-EFAMLETYAAWGDYDDCARTTRE 311

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD------KPDLRNPIIMH-----NVTE 304
            ++ + ++ + G  +         D     +G +       P L   +         VT 
Sbjct: 312 SIQYIVDQLTKGTDLEGTGKVRLADGTEFDFGGEWKEIEMYPSLNEALARKYPGQPEVTI 371

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                E +  +K++ ++       +PAKGG G+    + + E
Sbjct: 372 DSTVEELQKIAKVIGLD-------VPAKGGWGHGKLVEEIWE 406



 Score = 42.0 bits (97), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        I+    E   +  +N       ++  F     A + GM
Sbjct: 442 KWDLYVRGFELATGYSELVDPVIQRERFEDQARLAANGDDEAMRLDEDF---LAAMEQGM 498

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   GIDR++M L G   +RE  LFP+
Sbjct: 499 PPTAGTGMGIDRLLMALTGL-GIRETVLFPI 528


>gi|285018128|ref|YP_003375839.1| lysine-tRNA ligase (lysyl-tRNA synthetase) protein [Xanthomonas
           albilineans GPE PC73]
 gi|283473346|emb|CBA15851.1| probable lysine-trna ligase (lysyl-trna synthetase) protein
           [Xanthomonas albilineans]
          Length = 505

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 129/278 (46%), Gaps = 18/278 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75
           G  +RL+G +   R  G   F+ ++D  G  Q+   AN   A ++  K      ++ ++G
Sbjct: 67  GRSLRLAGRLLAKRVMGKASFVQLQDESGRIQLYLQANALGAAYDAFKGWDIGDIIAVEG 126

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             ++R+         TG++ + A  + +L+ A   PLP           R++ R++DL  
Sbjct: 127 -GLTRTK--------TGELSIKATALRLLTKALR-PLPDKWHGLSDVEQRYRQRYVDLIV 176

Query: 136 DTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
               + + VKR++II +MR  + A  F+E  TP++    P G  A+ F           Y
Sbjct: 177 SPEARAVFVKRSKIIRAMRAWLDARRFLEVETPMMH-YIPGGATAKPFTTHHNALDLDLY 235

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  G +R ++I   FR+E   +   P EF  +++  ++    ++++ 
Sbjct: 236 -LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRHNP-EFTMMELYEAYATYHEVMDL 293

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
            E+V+R V  +      V  + + I    A RR+  D+
Sbjct: 294 TESVIRDVARDVLGTTQVHWDGVDIDLGPAFRRWRMDE 331



 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L  NG EIA+G    +  E     F     +KE  ++    F   Y RA + G+PP 
Sbjct: 413 RFELFINGKEIANGFSELNDPEDQAARFQAQVAAKEGGDDEAMHFDADYIRALEVGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 473 GGLGIGIDRLVMLLTGSASIRDVLLFP 499


>gi|241896599|ref|ZP_04783895.1| lysyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241870080|gb|EER73831.1| lysyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 494

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 130/314 (41%), Gaps = 48/314 (15%)

Query: 2   HRY-RTHSCGDLGV--SDV--------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH   +L     DV         + V ++G +   R  G I F DI+D  G  QV
Sbjct: 32  HRFDRTHMASELHTLYDDVSGEDLEAQANEVAIAGRMMTKRRSGKISFADIKDRSGRIQV 91

Query: 51  -VANP--DSACFE-IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV 106
            V  P      +E   KS   +W L   G +M   A         G++ L+   I  LS 
Sbjct: 92  FVQKPVVGEETYEWFKKSDLGDW-LGFKGTIMKTRA---------GELSLNVTAITHLSK 141

Query: 107 AEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
           A   PLP           +++ R+LDL   D       KR++II+++R  M  + F E  
Sbjct: 142 ALR-PLPDKFHGLTDIETKYRQRYLDLIANDDSFDRFQKRSKIISAIRAYMDGDGFTEVE 200

Query: 166 TPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE- 223
           TP+L  A+    AR F+          Y +  A + + + L+  G +R ++I   FR+E 
Sbjct: 201 TPMLQNAAGGAAARPFITHHNALNIDLY-MRIALELHLKRLIVGGMERVYEIGRVFRNEG 259

Query: 224 -DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
            DP+ +    EF  ++   +F +  D++   EN+ +                 ++  DD 
Sbjct: 260 MDPKHN---PEFTVMESYAAFWDLGDVMTETENIFKAA--------------AKVVADDM 302

Query: 283 IRRYGTDKPDLRNP 296
           I  Y     DL  P
Sbjct: 303 IITYQEHTIDLAKP 316



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 8/52 (15%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GI ++ +E        + + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 448 GIDEDFIE--------SLEYGMPPTGGLGIGIDRLVMLLTNADTIRDVLLFP 491


>gi|226950975|ref|YP_002806066.1| lysine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226841230|gb|ACO83896.1| lysine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 504

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 132/314 (42%), Gaps = 36/314 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCID 74
           G  V ++G +   R HG   F DI D YG  Q+    +    E  K  ++     ++ + 
Sbjct: 60  GKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEKLKEYKTFDIGDIISVT 119

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G V        + +I   Q+   + +          PLP          +R++ R++DL 
Sbjct: 120 GTVFKTKTGETSIHITDFQLVCKSLR----------PLPEKWHGLKDPDLRYRQRYVDLI 169

Query: 134 ----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
                RDT     +KRT II SMR  +    F+E  TPIL+  +    A+ F+       
Sbjct: 170 INQDVRDTF----IKRTAIIKSMREFLDNRGFLEVETPILSPIAGGAAAKPFITHHNALD 225

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  A + Y + L+  GF++ ++I   FR+E       P EF  +++  ++ + +D
Sbjct: 226 IDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP-EFTAIELYEAYADYND 283

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKPDLRNPII 298
           ++   EN++  + E+      V            + R+   DA++ Y G D   ++N I 
Sbjct: 284 MMEITENMIAYICEKVLGTTKVEYEGAEIDFTPPWRRLTMVDAVKEYAGVDFNIIKNDIE 343

Query: 299 MHNVTEHFVHSEFR 312
              + +   H EF+
Sbjct: 344 ARTIAKE-KHIEFK 356



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + GMPP GG+  GIDR++M L    ++R+V LFP
Sbjct: 460 SLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFP 495


>gi|222528674|ref|YP_002572556.1| lysyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455521|gb|ACM59783.1| lysyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 497

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 20/253 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GL 76
           G FV ++G +   R HG   F+DI D  G  Q+    D    E+ +    E+    D G 
Sbjct: 58  GKFVCVAGRMLSKRGHGKASFVDILDTKGKIQIYIKID----EVGEEKYEEFKEYYDIGD 113

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--- 133
           ++    E    +   G+I + A++IE+L+     PLP           R++ R+LDL   
Sbjct: 114 IIGVKGEVFKTH--KGEISVKAKEIEMLTKCLR-PLPEKWHGLKDVDTRYRKRYLDLIVN 170

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGS 190
              RDT     +KR+ II S+R  +    F+E  TP+L+  +    AR F+         
Sbjct: 171 PQVRDTF----IKRSLIIRSIRKFLDDRGFLEVETPVLSPVAGGAAARPFITHHNALDID 226

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + + + L+  GFD+ +++   FR+E       P EF  +++  ++ +  D++
Sbjct: 227 LY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIYQAYADYKDMM 284

Query: 251 NTMENVLRGVFEE 263
           +  E ++  V +E
Sbjct: 285 DLTEKLITTVAQE 297



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFP 491


>gi|167626876|ref|YP_001677376.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
 gi|167596877|gb|ABZ86875.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
          Length = 560

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 138/308 (44%), Gaps = 27/308 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC 58
           ++Y  +S  +L   +      ++G V   R  G   F+ ++D+ G  QV    ++     
Sbjct: 105 NQYAQYSKQELEELEDKKQYNITGRVVLRRVMGKASFITLQDYSGRIQVYLKKSDLPEGQ 164

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +E  K+      LC  G ++  +      N  TG++ + A   EIL+ A   PLP     
Sbjct: 165 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEASHFEILTKAIR-PLPDKFHG 215

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++        
Sbjct: 216 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDKLDFMEVETPMMHVLQGGAA 275

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F           Y L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  
Sbjct: 276 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTM 333

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287
           L+  M++ + +D+++  EN+L  + +E      +            + RI   D+I +Y 
Sbjct: 334 LEFYMAYADYNDLMDLTENMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 393

Query: 288 TD--KPDL 293
            D  K DL
Sbjct: 394 DDITKEDL 401



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VM L  ++++R+V LFP
Sbjct: 519 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 555


>gi|47097268|ref|ZP_00234828.1| lysyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254829645|ref|ZP_05234332.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254901220|ref|ZP_05261144.1| lysyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254914105|ref|ZP_05264117.1| lysyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254938415|ref|ZP_05270112.1| lysyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|47014368|gb|EAL05341.1| lysyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258602063|gb|EEW15388.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258611029|gb|EEW23637.1| lysyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293592703|gb|EFG00464.1| lysyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 498

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 155/358 (43%), Gaps = 49/358 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F  I+D +   Q+    D+    I +   + + L   G ++  
Sbjct: 63  VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKLADLGDIIGI 118

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                  N  TG++ + A +  +LS +   LP    G ++  +  R++ R+LDL  +   
Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           +N  V R++I+   R  M  + F+E  TP+L T +    A+ F+          Y L  A
Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++ +E ++
Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292

Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD---------------KP 291
             V ++  NG T          ++ N+ RI   DA++ Y G D               K 
Sbjct: 293 STVCKQV-NGTTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEALELAKKH 351

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343
           D+  P+  H    H ++  F  + +   + P + V+  P      AK    +  F DR
Sbjct: 352 DV--PVTEHMTYGHILNEFFETYVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG+  GIDR+VMLL  A ++R++ LFP  ++
Sbjct: 457 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 496


>gi|223044407|ref|ZP_03614440.1| lysyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|314932739|ref|ZP_07840109.1| lysine--tRNA ligase [Staphylococcus caprae C87]
 gi|222442196|gb|EEE48308.1| lysyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|313654569|gb|EFS18321.1| lysine--tRNA ligase [Staphylococcus caprae C87]
          Length = 495

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 130/284 (45%), Gaps = 19/284 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKS 64
           S  +L   +  S V ++G +   R  G   F  I+D  G  Q+    D      F+I K 
Sbjct: 48  SKEELHEKEDESHVAIAGRLMTKRGKGKAGFAHIQDLEGQIQIYVRKDQVGEEQFDIWKI 107

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123
                ++ I+G++   +         TG+I + A+   +LS +   LP    G ++  + 
Sbjct: 108 ADLGDIVGIEGVMFKTN---------TGEISVKAKSFTLLSKSLRPLPDKFHGLQDIEQ- 157

Query: 124 IRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
            R++ R+LDL   +   +  + R++II  MR  +  + F+E  TP++   +    AR F+
Sbjct: 158 -RYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNKQGFLEVETPMMHQIAGGAAARPFV 216

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                   + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  
Sbjct: 217 THHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYE 274

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           ++ +  DI++  E+++R + +E      VS N   I  + + RR
Sbjct: 275 AYADYHDIMDLTESMVRHIAQEVFGSAKVSYNDEEIDLESSWRR 318



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490


>gi|242006633|ref|XP_002424153.1| asparaginyl-tRNA synthetase, cytoplasmic, putative [Pediculus
           humanus corporis]
 gi|212507478|gb|EEB11415.1| asparaginyl-tRNA synthetase, cytoplasmic, putative [Pediculus
           humanus corporis]
          Length = 552

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 119/278 (42%), Gaps = 21/278 (7%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V++ GWVHR+R  G  +IF+ +RD  G  Q V N D  C      + S     +    + 
Sbjct: 132 VKIYGWVHRLRRQGKSLIFITLRDGTGFLQCVLN-DLLCQSYEALILSTESTVLLYGTLK 190

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
           +  E   A    G  EL     +++ +A           E    I+   R + +R +   
Sbjct: 191 KLPEGKTA---PGGHELHVDYWKLIGLAPPGGAENILNEEAHIDIQLDNRHIMIRGENTA 247

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           K +  R+ ++ + R       + E + P L  +  EG       +   + ++  L Q+ Q
Sbjct: 248 KVLKMRSVVMQAFRDHYAERGYYEVTPPTLVQTQVEGGSTLFKLNYFGEEAY--LTQSSQ 305

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y +  +AS  D  F IA  +R E  R+ R   E+  ++ E  F++ ++ LN +E++L  
Sbjct: 306 LYLETCLASMGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFIDYEEFLNRVEDLLTD 364

Query: 260 VFEEF---SNGNTV----------SNNFLRICYDDAIR 284
           V ++    S+G+ V             F R+ Y DAI+
Sbjct: 365 VVDKVLKSSHGHLVYELNPDFKPPKKPFKRMDYADAIK 402


>gi|147677755|ref|YP_001211970.1| asparaginyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|189083275|sp|A5D2C2|SYN_PELTS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|146273852|dbj|BAF59601.1| aspartyl/asparaginyl-tRNA synthetases [Pelotomaculum
           thermopropionicum SI]
          Length = 430

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 35/287 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCI 73
            G  V + GW++  R  G I FL +RD  G+ Q V    +A    F +A ++  E  L +
Sbjct: 13  AGQEVLIKGWLYNKRSSGKICFLIVRDGTGLVQGVVEKKAAGEDLFSLAGNITQESSLML 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V              G  E+    +EI+ +AE  P+ +   +E+      + R L +
Sbjct: 73  RGTVREEPR-------APGGFEIQVTGLEIVHMAEPYPISL---KEHGVDFLAERRHLWI 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T  ++ + R R      CR   E  +F+    PI+T ++ EG  +        + ++
Sbjct: 123 R--TPRQSAILRIRSELEKGCRDFFEERDFVLADAPIITPTACEGTTNLFEIDYHGEKAY 180

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    R +   P FR E  ++ R   EF+ ++ E +F + +D + 
Sbjct: 181 --LSQSGQLYNE-ATAMALGRVYCFGPTFRAEKSKTRRHLMEFWMVEAEAAFFDFEDNIR 237

Query: 252 TMEN----VLRGVFE------EFSNGNT-----VSNNFLRICYDDAI 283
             E     ++R V E      E    +T     V+  F R+ Y DA+
Sbjct: 238 LQEELVSYLVRRVLENNKKELELLRRDTGRLTGVTPPFPRMSYTDAV 284


>gi|168215147|ref|ZP_02640772.1| lysyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170713448|gb|EDT25630.1| lysyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 501

 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 131/290 (45%), Gaps = 22/290 (7%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTHS  D         G  V+++G +   R  G ++F D+ D  G  Q+    D+   E 
Sbjct: 44  RTHSSADAKDNFEELEGKEVKVAGRLMSKRGQGKVVFADLADLPGKIQLFIKIDNVGEEA 103

Query: 62  AKSVRS----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            K  ++    +WV     +  ++           G++ +     E++  + + PLP    
Sbjct: 104 LKEFKTFDLGDWVAATGEVFKTK----------MGEVSVKVTSFELICKSLK-PLPEKWH 152

Query: 118 REYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
                 +R++ R +D+  +   K+  +KR++I+ ++R  +    F+E  TPIL+  +   
Sbjct: 153 GLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAGGA 212

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+          Y L  A + Y + L+ +GF++ +++   FR+E   S R   EF 
Sbjct: 213 AARPFITHHNALDIDMY-LRIATELYLKRLIVAGFEKVYEMGKNFRNEGV-SVRHNPEFT 270

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            +++  ++ + +D++  MEN++  V E+ +    V+     I +    RR
Sbjct: 271 AIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWRR 320



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M L  + ++R+V LFP
Sbjct: 460 ALETGMPPTGGLGIGIDRMIMFLTDSSSIRDVILFP 495


>gi|146093564|ref|XP_001466893.1| aspartyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134071257|emb|CAM69942.1| putative aspartyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|322500992|emb|CBZ36069.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 550

 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 110/264 (41%), Gaps = 18/264 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           V   V +   V   R  G + F+ +RD     Q +A    N      +    + +E ++ 
Sbjct: 77  VSKTVLIRARVSTTRKKGKMAFMVLRDGSDSVQAMAAVEGNVPKEMIDFMGQIATESIVD 136

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPV--FGEREYPE------S 123
           ++  V     E    +     IEL  +KI  ++ +   LP  +     +E  E       
Sbjct: 137 VEATVCK--VEQPITSTSHSDIELKVKKIHTVTESLRTLPFTLEDASRKESDEGAKVNLD 194

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R   R++DLR          ++R+    R  +I  +F E  +P +  +  EG  +    
Sbjct: 195 TRLNSRWMDLRTPASGAIFRLQSRVCQYFRQFLIDNDFCEIHSPKIINAPSEGGANVFKL 254

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              N+  F  L Q+PQ YKQ+++     R F++ P FR E+  + R   EF  LD+EM  
Sbjct: 255 EYFNR--FAYLAQSPQLYKQMVLQGDVPRVFEVGPVFRSENSNTHRHLTEFVGLDVEMRI 312

Query: 244 VEQ-DDILNTMENVLRGVFEEFSN 266
            E   ++L+  E++   +FE  + 
Sbjct: 313 DEHYYEVLDVAESLFNYIFEHLAT 336



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 12/86 (13%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGIS--KEVVENRFGGLYRAFQCGMPPHG 537
           YD+   G EI+SG  R H  +++L      NV ++  KE V+        +F+ G  PHG
Sbjct: 465 YDMFIRGEEISSGAQRIHDPDLLLARAKMLNVDLTPIKEYVD--------SFRLGAWPHG 516

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G++R+VML LG  NVR  SLFP
Sbjct: 517 GFGVGLERVVMLYLGLSNVRLASLFP 542


>gi|28209978|ref|NP_780922.1| lysyl-tRNA synthetase [Clostridium tetani E88]
 gi|39932178|sp|Q899G7|SYK_CLOTE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|28202413|gb|AAO34859.1| lysyl-tRNA synthetase [Clostridium tetani E88]
          Length = 502

 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 20/255 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS----EWVLCIDGL 76
           V ++G +   R HG   F DI D YG  Q+    +    E  K  +S    ++V     +
Sbjct: 63  VTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEERLKEYKSFDIGDFVTITGTV 122

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
             +R+ E    +I     +L A+ ++        PLP          +R++ R++DL   
Sbjct: 123 FKTRTGE---VSIHITDFKLIAKSLK--------PLPEKWHGLKDPDLRYRQRYVDLIVN 171

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
           + +    +KRT+II  MR  + A+++IE  TP+L+  +    AR F           Y L
Sbjct: 172 EDVRDTFMKRTKIIKYMREFLDAKDYIEVETPVLSPIAGGAAARPFTTHHNALDIDMY-L 230

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + Y + L+  GF++ ++I   FR+E       P EF  +++  ++ + +D++   E
Sbjct: 231 RIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP-EFTMIELYEAYADYNDMMEITE 289

Query: 255 NVLRGVFEEFSNGNT 269
           N++  + E+   GNT
Sbjct: 290 NMVAYIAEKVC-GNT 303



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VM L  + ++R+V LFP
Sbjct: 460 ALEIGMPPTGGLGIGVDRLVMFLTDSHSIRDVILFP 495


>gi|296231610|ref|XP_002761205.1| PREDICTED: lysyl-tRNA synthetase isoform 1 [Callithrix jacchus]
          Length = 625

 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 120/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           +R++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 154 LRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQ 213

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 214 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 262

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  M    F+E  TP++    P GA  + F+        +
Sbjct: 263 ILNDFVRQKFITRSKIITYIRSFMDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 321

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 322 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 379

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  + G  V+
Sbjct: 380 EITEKMVSGMVKHITGGYKVT 400



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 564 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 599


>gi|294142344|ref|YP_003558322.1| lysyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293328813|dbj|BAJ03544.1| lysyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 502

 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 141/317 (44%), Gaps = 45/317 (14%)

Query: 5   RTHSCGDLGVSDVGSFVR--LSGWVHRVRPHGGII-----FLDIRDHYGITQVVANPDSA 57
           R H   D+  ++ G + +  L G   +    G I+     FL I+D  G  Q  A  D  
Sbjct: 37  RKHKAADIQ-AEYGQYTKIDLEGMAIQRSIAGRIMAKRGPFLVIQDVSGRIQAYAGKD-- 93

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
              + K +++++     G ++           +TGQ+ LS  K ++    E+  L     
Sbjct: 94  ---VQKDLKAKFQGLDIGDIIG----------VTGQLHLSG-KGDLYVNMEDYQLLTKAL 139

Query: 118 REYPESI--------RFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPI 168
           R  PE          R++ R++DL  +   +N  + R+++++++R  MI + F+E  TP+
Sbjct: 140 RPLPEKFHGLTDQETRYRQRYVDLIVNEESRNAFIMRSKVVSAIRNFMIKKEFMEVETPM 199

Query: 169 L-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           + T      AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S
Sbjct: 200 MHTIPGGATARPFITHHNALDIEMY-LRVAPELYLKRLVVGGFERVFEINRNFRNEG-LS 257

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG-------NTVS--NNFLRIC 278
            R   EF  ++  M++ +  D+++  E +L  +  E           +TV     + R+ 
Sbjct: 258 PRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIATELCGSPKLPYGEHTVDFGGPYARLS 317

Query: 279 YDDAIRRYGTDKPDLRN 295
             DAI++Y  D   +++
Sbjct: 318 MLDAIKKYCPDNETIQS 334



 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G E+A+G    + +E   Q F     +K+  ++    +   Y RA + G+PP 
Sbjct: 408 RFEFFIGGREVANGFSELNDAEDQDQRFKAQVAAKDAGDDEAMFYDADYIRALEHGLPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML      +R+V LFP
Sbjct: 468 AGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|258516710|ref|YP_003192932.1| asparaginyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257780415|gb|ACV64309.1| asparaginyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 430

 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 115/286 (40%), Gaps = 31/286 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           V   V++ GW+   R  G I F+ IRD  G  Q   V    D   FE+A SV  E  +  
Sbjct: 13  VNQEVQIEGWLFNKRSSGKIRFIIIRDGSGQVQATLVRDETDPELFELASSVTQESSIRA 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            GLV                 EL+   IEI+  +++ P+ +   +E+        R L +
Sbjct: 73  TGLVREEPRSP-------SGYELTVTGIEIVGGSQDYPITL---KEHGVDFLADRRHLWI 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R+ I  ++R      +FI   +PI+TA + EG  +        + ++  
Sbjct: 123 RGPRQASILRIRSEIEQAIRDFFYERDFILADSPIITALAAEGTTNLFEIDYHGEKAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +   A    R +   P FR E  ++ R   EF+  + EM++ + +  L   
Sbjct: 181 LAQTGQLYSEA-TAMALGRVYNFGPVFRAEKSKTRRHLLEFWMAEAEMAYCDHEANLKIQ 239

Query: 254 ENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           E +               L+ +  +      VS  F RI Y +A++
Sbjct: 240 EELVYYIIQRVLQRKSLELKTLKRDIGKLEAVSLPFPRISYTEAVK 285


>gi|312623017|ref|YP_004024630.1| lysyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203484|gb|ADQ46811.1| lysyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 497

 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 20/253 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GL 76
           G FV ++G +   R HG   F+DI D  G  Q+    D    E+ +    E+    D G 
Sbjct: 58  GKFVCVAGRMLSKRGHGKASFVDILDTKGKIQIYIKID----EVGEEKYEEFKEYYDIGD 113

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--- 133
           ++    E    +   G+I + A++IE+L+     PLP           R++ R+LDL   
Sbjct: 114 IIGVKGEVFKTH--KGEISVKAKEIEMLTKCLR-PLPEKWHGLKDVDTRYRKRYLDLIVN 170

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGS 190
              RDT     +KR+ II S+R  +    F+E  TP+L+  +    AR F+         
Sbjct: 171 PQVRDTF----IKRSLIIRSIRKFLDDRGFLEVETPVLSPVAGGAAARPFITHHNALDID 226

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + + + L+  GFD+ +++   FR+E       P EF  +++  ++ +  D++
Sbjct: 227 LY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIYQAYADYKDMM 284

Query: 251 NTMENVLRGVFEE 263
           +  E ++  V +E
Sbjct: 285 DLTEKLITTVAQE 297



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFP 491


>gi|295663653|ref|XP_002792379.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226279049|gb|EEH34615.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 968

 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 118/274 (43%), Gaps = 26/274 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSA-----CFEIAKS 64
           ++ V  VG  V     VH VR     ++F+  R      Q V    +        + A+ 
Sbjct: 153 NITVDLVGQEVMFRARVHHVRRMSSKLVFIVFRQQIITFQGVLAEKAGKVSTFMIQWAEH 212

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVF-------- 115
           +R   ++ + G +       +   I    +EL  +K+ ++   EE +P  V+        
Sbjct: 213 IRVGSIVKVKGKLSKSLVPVVGCTI--HDVELDIEKLHVIVRREEPVPFSVYEAELTTRE 270

Query: 116 -----GEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                G R +  +  R   R LDLR D        ++ + N     + ++ FIE  TP L
Sbjct: 271 EHTHDGRRNHILDKTRLSNRILDLRTDASQSIFRIQSAVSNLFHSALDSQGFIEIHTPKL 330

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             S+ E        +  ++ ++ A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R
Sbjct: 331 QGSATESGASVFEVNYFSRAAYLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHR 388

Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
              E+  LD+EM+  E   + L  ++ VL+ +F+
Sbjct: 389 HLTEYTGLDIEMAIDEHYHEALEVIDCVLKEIFK 422



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H  +++ +   + GI    +E+   G    F+ G PPH G   
Sbjct: 528 FDIFVRGQEIVSGGQRIHDEKILEKRMRDAGIDPLTMEDYLEG----FRWGAPPHAGAGI 583

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R++ML+L   N+R  S+F
Sbjct: 584 GLERLIMLILKLGNIRLASMF 604


>gi|16802274|ref|NP_463759.1| lysyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224500853|ref|ZP_03669202.1| lysyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|224503815|ref|ZP_03672122.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|284803032|ref|YP_003414897.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284996173|ref|YP_003417941.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|38258394|sp|Q8YAB8|SYK_LISMO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|16409593|emb|CAD00755.1| lysyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|284058594|gb|ADB69535.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284061640|gb|ADB72579.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 498

 Score = 67.4 bits (163), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 155/358 (43%), Gaps = 49/358 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F  I+D +   Q+    D+    I +   + + L   G ++  
Sbjct: 63  VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKLADLGDIIGI 118

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                  N  TG++ + A +  +LS +   LP    G ++  +  R++ R+LDL  +   
Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           +N  V R++I+   R  M  + F+E  TP+L T +    A+ F+          Y L  A
Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++ +E ++
Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292

Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD---------------KP 291
             V ++  NG T          ++ N+ RI   DA++ Y G D               K 
Sbjct: 293 STVCKQV-NGTTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEARELAKKH 351

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343
           D+  P+  H    H ++  F  + +   + P + V+  P      AK    +  F DR
Sbjct: 352 DV--PVTEHMTYGHILNEFFETYVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG+  GIDR+VMLL  A ++R++ LFP  ++
Sbjct: 457 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 496


>gi|213621219|ref|ZP_03374002.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 136

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 49/132 (37%), Positives = 65/132 (49%), Gaps = 2/132 (1%)

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
           +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + +P   V A+   
Sbjct: 3   DFPVMTFAEAERRYGSDKPDLRNPMELVDVADLLKSVEFAVFAGPAN-DPKGRVAALRVP 61

Query: 333 GGGG-NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL 391
           GG   +R   D    + +  G  GLAYI       G      PVAK L     EAI  R 
Sbjct: 62  GGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVAKFLTADIVEAILERT 121

Query: 392 DMQDGDSCFFIA 403
             QDGD  FF A
Sbjct: 122 GAQDGDMIFFGA 133


>gi|297802914|ref|XP_002869341.1| hypothetical protein ARALYDRAFT_491623 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315177|gb|EFH45600.1| hypothetical protein ARALYDRAFT_491623 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 557

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 107/255 (41%), Gaps = 26/255 (10%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            DL    V S V + G VH  RP    + FL +R+     Q V          A  V+  
Sbjct: 98  SDLVEEMVESEVLIRGRVHINRPTSSKLGFLILRESGSTVQCVVRQSEKTKVGANMVKYS 157

Query: 69  WVLCIDGLVMSRSAETINANIITG---QIELSAQKIEILSVA-EELPLPVFG-------- 116
             L  +  V       +    +TG   Q+E+  +K+  ++ A  +LPL V          
Sbjct: 158 EQLSRESFVDVIGVVVLPKEPLTGTTQQVEIQVRKVYCINKALAKLPLSVEDAARSEADI 217

Query: 117 ----EREYP-----ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
               + E P     +  R  +R LDLR          + ++ NS R ++I ++F+   TP
Sbjct: 218 EKSLQTEKPAARVNQDTRLNHRVLDLRTPANQAIFRLQCQVENSFREKLIFKDFVGIHTP 277

Query: 168 ILTASSPEGARDFLVPSRVN-QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
            L A S EG        R+  +G    L Q+PQ +KQ+ +     R F++ P FR ED  
Sbjct: 278 KLMAGSSEGGSAVF---RLEYKGQPACLAQSPQLHKQMAICGDLRRVFEVGPVFRAEDSF 334

Query: 227 SDRLPGEFYQLDMEM 241
           + R   EF  LD+EM
Sbjct: 335 THRHLCEFVGLDVEM 349



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H+ E++ Q     GI  + +         +F+ G PPHGG   
Sbjct: 472 FDVFIRGEEIISGAQRVHIPEILEQRAGEFGIDVKTISTYID----SFRYGAPPHGGFGV 527

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML  G  N+R+ SLFP
Sbjct: 528 GLERVVMLFCGLNNIRKTSLFP 549


>gi|150392206|ref|YP_001322255.1| lysyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149952068|gb|ABR50596.1| lysyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 499

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 118/248 (47%), Gaps = 13/248 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R HG   F++I+D  G  QV    D    +I +     +V    G +
Sbjct: 52  GQKVTIAGRMMAKRGHGKASFINIQDKDGRIQVYVRED----KIGEKAYELFVTYDRGDI 107

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +    E    N   G++ + A ++++L+ + + LP    G ++  + +R++ R++DL  +
Sbjct: 108 LEIQGEIFKTN--KGEVSVKALEVKLLTKSLQVLPEKWHGLKD--QDLRYRQRYVDLIVN 163

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
             + K  + R+R I S+R  +    +IE  TPIL T +    A+ F           Y L
Sbjct: 164 PEVKKTFMVRSRAIKSIRSFLDDRGYIEVETPILDTIAGGASAKPFTTHHNTLGIDMY-L 222

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G DR ++I   FR+E       P EF  +++  ++ +  D+++  E
Sbjct: 223 RIATELHLKRLIVGGLDRVYEIGRLFRNEGMSIKHNP-EFTTIELYEAYADYKDMMDITE 281

Query: 255 NVLRGVFE 262
           N++  V E
Sbjct: 282 NIVAHVAE 289



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR++MLL  + ++R+V LFP
Sbjct: 449 ALEVGLPPTGGLGIGIDRLMMLLTDSPSIRDVLLFP 484


>gi|270290208|ref|ZP_06196434.1| lysyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304385523|ref|ZP_07367867.1| lysine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|270281745|gb|EFA27577.1| lysyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304328027|gb|EFL95249.1| lysine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 498

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 134/312 (42%), Gaps = 39/312 (12%)

Query: 2   HRY-RTH-------SCGDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH         GD+   ++   G    ++G +   R  G + F D++D  G  Q+
Sbjct: 33  HRFERTHLAAQLHEKYGDMSKEEIEEQGVVATVAGRMVSKRGKGKVGFADLKDRSGKIQL 92

Query: 51  VANPDSA---CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
               D      ++I K       L + G VM             G++ +    +  LS A
Sbjct: 93  YVRKDELGEDVYKIFKRADLGDFLGVTGDVMKTD---------MGELTIKVTSLTFLSKA 143

Query: 108 EELPLP-VFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
              PLP  F   +  E I ++ R+LDL   D   +   KRT+I++++R  +    F E  
Sbjct: 144 LR-PLPDKFHGLQNVEQI-YRQRYLDLIANDESMERFRKRTKIVSAIRRYLDDHGFAEVE 201

Query: 166 TPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
           TP+L T +    AR F+          Y L  A + + + L+  G +R ++I   FR+E 
Sbjct: 202 TPVLHTQAGGASARPFITHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEG 260

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFL 275
             +   P EF  L+  +++ +  D+++  E +L+      S+   ++          +F 
Sbjct: 261 IDTRHNP-EFTMLETYVAYYDFHDVMDETEGILKAAVNAVSDDGKITYQGTELDLNQDFE 319

Query: 276 RICYDDAIRRYG 287
           R+   DAI++Y 
Sbjct: 320 RLHMVDAIKKYA 331



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 492


>gi|322822542|gb|EFZ28562.1| asparaginyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 745

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 104/255 (40%), Gaps = 13/255 (5%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GDL     G+ VR+ GW HRVR    + F+ +RD  G  Q V N ++  F       
Sbjct: 303 HRIGDLSSMQEGTKVRVVGWAHRVRHQSRLSFVVLRDGSGYIQAVFNGETEPFH------ 356

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  L I G +     E   A  +    EL   +  I+  ++            P+ +  
Sbjct: 357 RETSLAIRGTL---KYEPKAATELQPPYELHVDEYAIIGNSDGSIENAITPESSPDKL-L 412

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR       I  R  +I + R    + N  E + P L  +  EG         +
Sbjct: 413 DDRHLVLRGTYGSTTIKVRHELIRAFREYCWSVNMFEVTPPTLVQAECEGGSTLF--DVI 470

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
             G+   L Q+ Q Y +   +S  D Y  I P +R E  ++ R   E+  L++E S  + 
Sbjct: 471 YYGTTAHLTQSSQLYLETCTSSVGDVYC-ILPSYRAEKSKTRRHLSEYTHLEVEYSICDF 529

Query: 247 DDILNTMENVLRGVF 261
           +  L+ +E+++ G F
Sbjct: 530 ELFLSKLEDLIVGAF 544



 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 5/88 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D++  G  EI  G +R    E +++A+    +   V    +       + G  PHGG   
Sbjct: 660 DVLAPGIGEIVGGSMRMWDHEELIEAYRRKDLDPSV----YYWYTEQRKYGSTPHGGFGL 715

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G++R ++ LL   +VRE  LFP     C
Sbjct: 716 GVERFLVWLLNLDSVREACLFPRYMGRC 743


>gi|210610360|ref|ZP_03288365.1| hypothetical protein CLONEX_00555 [Clostridium nexile DSM 1787]
 gi|210152510|gb|EEA83516.1| hypothetical protein CLONEX_00555 [Clostridium nexile DSM 1787]
          Length = 496

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 132/286 (46%), Gaps = 30/286 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F +++D  G  Q     D    E  K  +   +  I G+ 
Sbjct: 57  GKKVSIAGRIMSKRVMGKASFCNVQDLQGNIQSYVARDCVGEEAYKDFKKMDIGDIVGI- 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
                E     +  G+I + A+++ +L+ + ++ LP          +R++ R++DL  + 
Sbjct: 116 ---KGEIFRTKM--GEISIHAEEVTLLAKSLQI-LPEKFHGLTNTDLRYRQRYVDLIMNP 169

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +    VKR++I+ S+R  +  + F+E  TP+L A++   A      +R  +  F AL +
Sbjct: 170 DVKDTFVKRSKILASIRRYLDGQGFMEVETPMLVANAGGAA------ARPFETHFNALNE 223

Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                 + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++
Sbjct: 224 DLKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMM 282

Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           +  EN+ R V +E     T++ N         F RI   DA+++Y 
Sbjct: 283 DLTENLYRYVAQEVLGTTTITYNGVEMDLGKPFERITMVDAVKKYA 328



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 27/41 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+ MLL  +  +R+V LFP  ++ 
Sbjct: 454 ALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFPTMKSL 494


>gi|126321623|ref|XP_001366376.1| PREDICTED: similar to asparaginyl-tRNA synthetase [Monodelphis
           domestica]
          Length = 548

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 113/289 (39%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V             +  E   C +G+
Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLILRDGTGYLQCV-------------LSDELCQCYNGV 171

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 172 VLSTESSVAVYGTLNLTPEGKQAPGGHELSCDYWELIGLAPAGGADNLINEESDVDVQLN 231

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ +    R       + E + P L  +  EG           
Sbjct: 232 NRHMMIRGENMSKILKVRSVVTGCFRDHFFDRGYYEITPPTLVQTQVEGGATLFKLDYFG 291

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  D
Sbjct: 292 EDAF--LTQSSQLYLETCIPALGD-VFCIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFD 348

Query: 248 DILNTMENVLRGVFEEFSNGNTVS-------------NNFLRICYDDAI 283
           D+LN +E+++  V +        S               F R+ Y DAI
Sbjct: 349 DLLNRLEDLVCDVVDRILKSPAASLLYDLNPTFTPPKRPFKRMNYSDAI 397


>gi|242371652|ref|ZP_04817226.1| lysyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242350601|gb|EES42202.1| lysyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 495

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 132/289 (45%), Gaps = 19/289 (6%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
           ++  +S  +L   +  S V ++G +   R  G   F  I+D  G  Q+    D      F
Sbjct: 43  QWDQYSKEELHEKEDESHVAIAGRLMTKRGKGKAGFAHIQDLSGQIQIYVRKDQVGEEQF 102

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER 118
           +I K      ++ I+G++   +         TG+I + A+   +LS +   LP    G +
Sbjct: 103 DIWKIADLGDIVGIEGVMFKTN---------TGEISVKAKSFTLLSKSLRPLPDKFHGLQ 153

Query: 119 EYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
           +  +  R++ R+LDL   +   +  + R++II  MR  +  + F+E  TP++   +    
Sbjct: 154 DIEQ--RYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNKQGFLEVETPMMHQIAGGAA 211

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+        + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  
Sbjct: 212 ARPFVTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTM 269

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +++  ++ +  DI++  E+++R + +E      V  N   I  + + RR
Sbjct: 270 IELYEAYADYHDIMDLTESMVRHIAQEVFGSAKVQYNGEEIDLESSWRR 318



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490


>gi|190574184|ref|YP_001972029.1| lysyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|190012106|emb|CAQ45729.1| putative lysyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
          Length = 503

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 20/279 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCI 73
           G  V+++G +   R  G   F  I+D  G  Q+      A    A +    W    ++ +
Sbjct: 65  GRQVKMAGRLMAKRIMGKASFAQIQDESGRIQLFLQ--GAVLGDAYTAFKGWDVGDIIAV 122

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           +G  ++R+         TG++ + A+ I +L+ +   PLP           R++ R++DL
Sbjct: 123 EG-GLTRTK--------TGELSVKAESIRLLTKSLR-PLPDKWHGLADVEQRYRQRYVDL 172

Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
                 + + +KR++II +MR  +   +F+E  TP++        A+ F           
Sbjct: 173 IVTPESRAVFIKRSKIIRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDL 232

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L   G +R ++I   FR+E   +   P EF  +++  ++   ++I++
Sbjct: 233 Y-LRVAPELYLKRLTVGGLERVYEINRNFRNEGVSTRHNP-EFTMMELYEAYATYNEIMD 290

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
             E V+R V +  + G  V  +  +I    A RR+  D+
Sbjct: 291 LTEGVIRDVAKAVNGGTEVEWDGAKIDLGPAFRRWRMDE 329



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L  NG E+A+G    +  E   Q F     +KE  ++    +   Y RA + GM P 
Sbjct: 411 RFELFVNGKELANGFSELNDPEDQAQRFQAQVAAKEGGDDEAMHYDADYIRALEYGMAPT 470

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG+  G+DR+VMLL G+ ++R+V LFP
Sbjct: 471 GGLGIGVDRLVMLLTGSSSIRDVLLFP 497


>gi|19111871|ref|NP_595079.1| mitochondrial asparagine-tRNA ligase Slm5 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74625260|sp|Q9P6I0|SYNM_SCHPO RecName: Full=Asparaginyl-tRNA synthetase, mitochondrial; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|7801317|emb|CAB91185.1| mitochondrial asparagine-tRNA ligase Slm5 (predicted)
           [Schizosaccharomyces pombe]
          Length = 441

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 38/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPD-SACFEIAKSVRSEWVLCID 74
           G  + ++GWV  +R    + F  + D       QVV +P+ S       SV  E  L + 
Sbjct: 20  GELISINGWVRSIRKLKNVCFAMVSDGTCQQALQVVTSPEQSKKLSYGASVNIEGQLAV- 78

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
                    + NA +   Q EL A+KI+I     +   P+  +    E +R   +   LR
Sbjct: 79  ---------SKNAKLGLQQYELLAEKIKIYGQINDDNYPIQKKHLTTEMLR---QIPHLR 126

Query: 135 RDTLHKNIVKRTRI--INSMRCRMIAENFIECSTPILTASSPEGARDF--LVPS------ 184
             T  +  + R R   + ++R    +++F E + PI+T+S  EGA +   L P       
Sbjct: 127 LRTAKQGEIFRLRSDSLKALRQFFSSKDFTETNPPIITSSDCEGAGEVFTLTPQETHKNK 186

Query: 185 ---RVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
              R +Q  F+  P       QL    +A G  R + I+P FR E   + R   EF+ L+
Sbjct: 187 SFERDDQKHFFDRPAFLTVSTQLHLEALALGLSRVYTISPAFRAEQSHTSRHLAEFWMLE 246

Query: 239 MEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
            E++F+     + + ME++++     ++  + +  N+ R  +D  ++ +
Sbjct: 247 AEVAFMTSLSQLTSLMEDMIK-----YTLNSLMEQNYHRDHWDQLLKPW 290


>gi|73669176|ref|YP_305191.1| lysyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|72396338|gb|AAZ70611.1| lysyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 515

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 129/286 (45%), Gaps = 29/286 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKSVRSEWVLCI 73
           G  VR +G ++ +R  G +IF D+ D  G  QV       PD         V S  ++ +
Sbjct: 76  GLTVRTAGRLYNIRRLGKMIFADLGDQGGRIQVTLRKGNLPDEDFKTFKTLVDSGDIVGV 135

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLD 132
            G +              G+  +S  +  +LS +   LP    G ++     R++ R+LD
Sbjct: 136 QGTLFRTKR---------GENSISVSEFSLLSKSLCALPEKFHGLKDV--ETRYRKRYLD 184

Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGS 190
           L  +   + I V R+++I+ +R  +    F+E  TPIL        AR F        G 
Sbjct: 185 LIVNADKREIFVMRSKLISEIRRYLSDREFLEFETPILQNVYGGANARPFTTFHNC-LGQ 243

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  AP+ Y + L+  G+++ F+I+  FR+ED  +   P EF  +++  ++ + +D++
Sbjct: 244 KLFLRIAPELYLKRLVVGGYEKVFEISKNFRNEDIDTTHNP-EFTMIEVYEAYRDYNDMM 302

Query: 251 NTMENV-------LRGVFEEFSNGNTVS--NNFLRICYDDAIRRYG 287
           +  E +       L G +E     NT++    + RI  +DA++ Y 
Sbjct: 303 DLTEGLISELVFKLTGSYEVKIGENTLNLHTPWKRISMEDALKEYA 348



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 14/92 (15%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---------YRAFQC 531
           +++L  NG+E+A+G      SE+           ++  + + G L           A   
Sbjct: 423 RFELFLNGWELANG-----YSELNDPIEQQKRFEEQDKKRKLGDLEAQTIDYDFVNALGY 477

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP GG+  GIDR+ M+L G  +++EV LFP
Sbjct: 478 GMPPTGGMGLGIDRLTMILAGLDSIKEVILFP 509


>gi|71660150|ref|XP_821793.1| asparaginyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70887181|gb|EAN99942.1| asparaginyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 745

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 104/255 (40%), Gaps = 13/255 (5%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GDL     G+ VR+ GW HRVR    + F+ +RD  G  Q V N ++  F       
Sbjct: 303 HRIGDLSSMQEGTKVRVVGWAHRVRHQSRLSFVVLRDGSGYIQAVFNGETEPFH------ 356

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  L I G +     E   A  +    EL   +  I+  ++            P+ +  
Sbjct: 357 RETSLAIRGTL---KYEPKAATELQPPYELHVDEYAIIGNSDGSIENAITPESSPDKL-L 412

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR       I  R  +I + R    + N  E + P L  +  EG         +
Sbjct: 413 DDRHLVLRGTYGSTTIKVRHELIRAFREYCWSVNMFEVTPPTLVQAECEGGSTLF--DVI 470

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
             G+   L Q+ Q Y +   +S  D Y  I P +R E  ++ R   E+  L++E S  + 
Sbjct: 471 YYGTTAHLTQSSQLYLETCTSSVGDVYC-ILPSYRAEKSKTRRHLSEYTHLEVEYSICDF 529

Query: 247 DDILNTMENVLRGVF 261
           +  L+ +E+++ G F
Sbjct: 530 ELFLSKLEDLIVGAF 544



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 5/88 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D++  G  EI  G +R    E +++A+    +   V    +       + G  PHGG   
Sbjct: 660 DVLAPGIGEIVGGSMRMWDHEELIEAYRRKDLDPSV----YYWYTEQRKYGSTPHGGFGL 715

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G++R ++ LL   +VRE  LFP     C
Sbjct: 716 GMERFLVWLLNLDSVREACLFPRYMGRC 743


>gi|309785303|ref|ZP_07679934.1| lysyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308926423|gb|EFP71899.1| lysyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 505

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 130/288 (45%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295
            + +      E + G+        F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQNILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRSETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|220909288|ref|YP_002484599.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|219865899|gb|ACL46238.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 467

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 68/309 (22%), Positives = 122/309 (39%), Gaps = 51/309 (16%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF-EIAKSVRSEWVLCID 74
           G+ V++ GWV   R      FL++ D   +   QV+   D   + E+ K + +   + + 
Sbjct: 18  GTRVKVKGWVRTKREQKEFTFLEVNDGSSLQSLQVILKRDLPNYTEVLKQLNTGASVTVA 77

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G++++   +         +IEL A ++++   A+    P+  +R   E +R     L  R
Sbjct: 78  GMLVASQGKN-------QRIELQADQVQVWGEADPETYPLQKKRHSLEFLR-TIGHLRSR 129

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +TL      R     ++        F+   TPI+TAS  EGA +    + ++       
Sbjct: 130 TNTLGAVFRIRNACARAIHQFFQERGFLWVHTPIITASDCEGAGEMFAVTSLDLSKVPLT 189

Query: 195 PQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           P     Y Q                  +MA  F   +   P FR E+  + R   EF+ +
Sbjct: 190 PDQKVDYSQDFFGRPTYLTVSGQLEAEIMAMAFTNVYTFGPTFRAENSNTSRHLAEFWMV 249

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEE----------FSNG-------------NTVSNNF 274
           + EM+F + +  ++  E  L+ +F+           F N              N +S+ F
Sbjct: 250 EPEMAFCDLEGDMDLAEAFLKFIFQHVLDTCPEDLAFCNQWVDESKSVLATAENIISHQF 309

Query: 275 LRICYDDAI 283
            RI Y +AI
Sbjct: 310 ERITYTEAI 318


>gi|256090517|ref|XP_002581234.1| lysyl-tRNA synthetase [Schistosoma mansoni]
 gi|238667090|emb|CAZ37473.1| lysyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 634

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 129/268 (48%), Gaps = 15/268 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACF 59
           + +Y + S G+  + DV   V ++G VH  R  G  +IF DIR      QV+AN  S   
Sbjct: 69  IKKYSSLSSGE-HLDDVS--VSIAGRVHAKRSAGSKLIFYDIRSEDCRLQVMANIRSYKS 125

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGER 118
           E      +E +   D +  S S          G++ +   +I++LS    +LP   +G +
Sbjct: 126 ETEFHDINEIIHLGDIIGCSGSP----GKSKLGELSIIPHEIKLLSPCLYQLPHMHYGVK 181

Query: 119 EYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
           +  +  RF+ R+LDL   + + +  + R RIIN +R  +    F+E  TP++ T +    
Sbjct: 182 D--KETRFRQRYLDLLMNEDVRQRFITRARIINYVRRFLDDLGFLEVETPMMNTIAGGAA 239

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F+        + Y +  AP+ Y ++L+  G +R +++   FR+E       P EF  
Sbjct: 240 AKPFITYHNDLNMNLY-MRVAPELYLKMLIIGGLNRVYELGRVFRNEGIDLTHNP-EFTS 297

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEF 264
            +  M++ + +D++   E+++ G+ +  
Sbjct: 298 CEFYMAYADYEDLMTITEDLISGLVKHL 325



 Score = 40.4 bits (93), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 21/36 (58%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   G+PP  G   GIDR+ M L    N++EV LFP
Sbjct: 496 ALGYGLPPTAGWGLGIDRLTMFLTNTNNIKEVILFP 531


>gi|195977860|ref|YP_002123104.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225868802|ref|YP_002744750.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp.
           zooepidemicus]
 gi|195974565|gb|ACG62091.1| asparaginyl-tRNA synthetase AsnS [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225702078|emb|CAW99706.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp.
           zooepidemicus]
          Length = 448

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 79/360 (21%), Positives = 142/360 (39%), Gaps = 49/360 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+          +A F+  + +
Sbjct: 15  VGQEVTVGAWVANKSGKGKIAFLQLRDGSAFFQAVAFKPNLIQAFGEEAGAAKFDTIRHL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V   +             EL    +E++  +++ P+     +E+     
Sbjct: 75  SQETSVLVKGIVKEDARSKFG-------YELDITDLEVIGDSKDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR       +  R  II +         FI+  +PIL+ ++ E   +      
Sbjct: 125 MDHRHLWLRSRRQAAIMQIRNAIIYASYEFFDQNGFIKFDSPILSGNAAENTTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
               +F  L Q+ Q Y +  +MA G  R F   P FR E  ++ R   EF+ +D E  F+
Sbjct: 185 FGNPAF--LSQSGQLYLEAGMMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYPFL 240

Query: 245 EQDDILNTMENVLRGVFE----------EFSNGNT------VSNNFLRICYDDAI---RR 285
             ++ L+  E  ++ + +          E    +T      ++  F R+ YDDAI   + 
Sbjct: 241 SHEESLDLQEAYVKAMIQGVLDRAPQALELLERDTELLKKYIAEPFKRVSYDDAISLLQE 300

Query: 286 YGTDKPDLRNPII----MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
           + TD      PI       +  E ++ + F V + +++    ++ + +    G   R  C
Sbjct: 301 HSTDDDADYEPIQHGDDFGSPHETWISNYFGVPTFVINYPASFKAFYMKPVPGNEERVLC 360


>gi|187935723|ref|YP_001884425.1| lysyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187723876|gb|ACD25097.1| lysine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 501

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 122/258 (47%), Gaps = 20/258 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS----EWVLCI 73
           G  V ++G +   R  G ++F DI D  G  Q+    D    E  KS ++    +WV+  
Sbjct: 60  GKNVTVAGRIMSKRGQGKVVFSDIHDRDGKIQLFIKIDLVGEESLKSYKTYDLGDWVVAT 119

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             +  ++          TG++ +     E++  + + PLP          +R++ R +D+
Sbjct: 120 GEVFTTK----------TGEVSVKVSNFELICKSLK-PLPEKWHGLKDPDLRYRQREVDI 168

Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +  + +  +KR++II+ +R  +  + F+E  TPIL   +    A+ F+          
Sbjct: 169 ITNPEVKETFIKRSKIISGIREFLDTKGFLEVETPILAPIAGGAAAKPFVTHHNTLDIDM 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + Y + L+ +GF++ ++I   FR+E   S R   EF  +++  ++ + +D++ 
Sbjct: 229 Y-LRIATELYLKRLVVAGFEKVYEIGRNFRNEG-MSVRHNPEFTAIELYEAYSDYNDMME 286

Query: 252 TMENVLRGVFEEFSNGNT 269
             EN++  V E+  NG T
Sbjct: 287 ITENMVAYVCEKV-NGTT 303



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M L  A ++R+V LFP
Sbjct: 460 ALETGMPPTGGMGMGIDRLIMFLTDASSIRDVILFP 495


>gi|315055975|ref|XP_003177362.1| lysyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311339208|gb|EFQ98410.1| lysyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 609

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 126/253 (49%), Gaps = 11/253 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           VR++G ++  R  G  +IF D+R      QV      A  ++    + E +   D + ++
Sbjct: 128 VRIAGRIYTKRSSGAKLIFYDLRAEGVKVQVACQAQEATGDVPFEAQHEQLRRGDIVGIV 187

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A+++ +LS    ++P   +G ++  +  RF+ R+LDL  + 
Sbjct: 188 GFPGRTNPKNRDDGELSIFARQVVLLSPCLHQIPSEHYGLKD--QEQRFRQRYLDLIMND 245

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194
             +N+ V R++I++ +R      +F+E  TP++ A +    A+ F+   + +N   F  +
Sbjct: 246 SSRNVFVTRSKIVSYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHHNELNMNLFMRI 305

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  E
Sbjct: 306 --APELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDLMNVTE 362

Query: 255 NVLRGVFEEFSNG 267
           +++ G+ +  + G
Sbjct: 363 DLVSGLVKHVTGG 375



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576


>gi|301103370|ref|XP_002900771.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262101526|gb|EEY59578.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 514

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 117/279 (41%), Gaps = 31/279 (11%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAK 63
           S  DL     G    + G +  VR    I F+ +R+     Q + +          + A 
Sbjct: 57  SVEDLNPELQGESFWVRGHLQAVRAKSKIAFITLREQTATIQGILHESDKVSRPMIKFAA 116

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
            V  E V  +D  V     ++   +     +EL+ +K  ++S A  ELP  V  +   P+
Sbjct: 117 GVSKESV--VDVYVTLSVPDSPVVSTTQKDVELNVEKFFVVSKALPELPFQV-EDAARPD 173

Query: 123 SI---------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCR--MIAENFIECS 165
           ++               R   R LDLR  T     + R +   S   R  +I  NF+E  
Sbjct: 174 ALVKAEGSTYVNVGLETRLNSRPLDLR--TPANQCIMRIQAAVSQLFREFLIQRNFVEIH 231

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA-SGFDRYFQIAPCFRDED 224
           TP L   + E   +       +Q +  AL Q+PQ YKQ+  A +G +R F+I P FR E+
Sbjct: 232 TPKLVGGASESGANCFTLKYFDQDA--ALAQSPQTYKQMACAVAGLERVFEIGPVFRAEN 289

Query: 225 PRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
             + R   EF  LD+EM+  E   ++L    ++   +F+
Sbjct: 290 SNTHRHMCEFVGLDLEMTIKEHYHEVLEVFSDLFIYIFD 328



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD++  G EI SG  R H  +++++    +G+ +E + N       +F+ G  PHGG   
Sbjct: 429 YDMMIRGEEIVSGAQRVHDPKLLMERMDELGVPQESMRNYID----SFRLGALPHGGGGI 484

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+ S+FP
Sbjct: 485 GLERVVMLYLGLGNIRKASMFP 506


>gi|148381459|ref|YP_001256000.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153932316|ref|YP_001385834.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153936702|ref|YP_001389241.1| lysyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|229559854|sp|A7FZA5|SYK_CLOB1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|229559855|sp|A5I7P4|SYK_CLOBH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|148290943|emb|CAL85079.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152928360|gb|ABS33860.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152932616|gb|ABS38115.1| lysine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 504

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 39/330 (11%)

Query: 5   RTHSCGDL--GVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++     D+ G  V ++G +   R HG   F DI D YG  Q+    +    E 
Sbjct: 44  RTHTSKEVKENYEDLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103

Query: 62  AKSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            K  ++     ++ + G V        + +I   Q+   + +          PLP     
Sbjct: 104 LKEYKTFDIGDIISVTGTVFKTKTGETSIHITDFQLVCKSLR----------PLPEKWHG 153

Query: 119 EYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                +R++ R++DL      RDT     +KRT II +MR  +  + F+E  TPIL+  +
Sbjct: 154 LKDPDLRYRQRYVDLIINQDVRDTF----MKRTAIIKTMREYLDNKGFLEVETPILSPIA 209

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+          Y L  A + Y + L+  GF++ ++I   FR+E       P 
Sbjct: 210 GGAAAKPFITHHNALNIDMY-LRIATELYLKRLIVGGFEKVYEIGRNFRNEGMDIRHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283
           EF  +++  ++ + +D++   EN++  + E+      V            + R+   DA+
Sbjct: 268 EFTVIELYEAYADYNDMMEITENMIAYICEKVLGTTKVQYEGTEIDFTPPWRRLTMVDAV 327

Query: 284 RRY-GTDKPDLRNPIIMHNVTEHFVHSEFR 312
           R Y G D   +++ I    + +   H EF+
Sbjct: 328 REYAGVDFNTIKDDIEARTIAKE-KHIEFK 356



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + GMPP GG+  GIDR++M L    ++R+V LFP
Sbjct: 460 SLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFP 495


>gi|90020864|ref|YP_526691.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase
           [Saccharophagus degradans 2-40]
 gi|89950464|gb|ABD80479.1| lysyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 502

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 143/312 (45%), Gaps = 35/312 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            + +    V ++G +  +R  G   F++++D  G  Q+    ++  F  AKS+    ++ 
Sbjct: 58  ALEEAAEVVSVAGRI--IRNRGA--FMELQDGSGRIQLYVTKEARPF--AKSLDLGDIVG 111

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G V+ +S +        G + +S  + ++L+ A   PLP        + +R++ R++D
Sbjct: 112 AKG-VLHKSGK--------GDLYVSLDEYQLLTKALR-PLPDKFHGLADQEMRYRQRYVD 161

Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGS 190
           L     + K  V R+R++  +R  +  + F+E  TP+L T      AR F+         
Sbjct: 162 LIANPEVRKTFVTRSRVVQFIRNYLNEKAFLEVETPMLQTIPGGASARPFITHHNALDMD 221

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R ++I   FR+E   S R   EF  L+   ++ + +D++
Sbjct: 222 MY-LRIAPELYLKRLVVGGFERVYEINRNFRNEG-LSTRHNPEFTMLEFYQAYADYNDLM 279

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           +  E++LR + +       V N          +   G D+P+     + ++  + F  + 
Sbjct: 280 DLTEDMLRNLAQTVLGDTKVVN---------TLPSKGDDEPE----TVTYDFAQPF--TR 324

Query: 311 FRVFSKILSVNP 322
             VF+ IL  NP
Sbjct: 325 LSVFNSILQYNP 336



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EIA+G    + +E   Q F      K+  ++    +   Y RA + G+PP 
Sbjct: 411 RFEFFVGGREIANGFSELNDAEDQAQRFKEQVAEKDAGDDEAMHYDADYVRALEYGLPPT 470

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 471 AGEGIGIDRLVMLLTDSPSIRDVLLFP 497


>gi|300934636|ref|ZP_07149892.1| lysyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 535

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 35/277 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEWVLCID-GLVM 78
           V ++G V  VR  G + F  ++D  G T QV+     +  E+ +   ++W   +D G ++
Sbjct: 89  VGVAGRVMFVRNTGKLAFATLQDGDGTTLQVML----SLAEVGEEALNDWKALVDLGDMV 144

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
                 I++    G++ + AQ+   ++     PLPV   +E  E  R ++R+ DL  R+ 
Sbjct: 145 FVEGRIISSR--RGELSVMAQRW-FMTAKSLRPLPV-AHKEMSEDTRIRHRYTDLIMREQ 200

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
             KN + R +++ ++R  +    F+E  TP+L T      AR F+  S       Y L  
Sbjct: 201 ARKNAMTRIKVMRALRNALERRGFLELETPMLQTLHGGAAARPFITHSNALDIDLY-LRI 259

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + +  +  G DR F++   FR+E   S   P EF  L+                  
Sbjct: 260 APELFLKRAVVGGLDRVFEVNRNFRNEGVDSSHSP-EFAMLE------------------ 300

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
               ++ + + NT +     I  + AI  +GT K  L
Sbjct: 301 ---TYQAYGDYNTAATATREIIQEVAIEVFGTTKVTL 334



 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        I+    E   +  +       V++  F     A + GM
Sbjct: 442 KWDLYVRGFELATGYSELIDPVIQRERFEDQARLAAGGDDEAMVLDEDF---LAAMEQGM 498

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   GIDR++M L G   +RE  LFP+
Sbjct: 499 PPTAGTGMGIDRLLMALTGL-GIRETILFPL 528


>gi|225870243|ref|YP_002746190.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225699647|emb|CAW93326.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 448

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 79/360 (21%), Positives = 142/360 (39%), Gaps = 49/360 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+          +A F+  + +
Sbjct: 15  VGQEVTVGAWVANKSGKGKIAFLQLRDGSAFFQAVAFKPNLIQAFGEEAGAAKFDTIRHL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V   +             EL    +E++  +++ P+     +E+     
Sbjct: 75  SQETSVLVKGIVKEDARSKFG-------YELDITDLEVIGDSKDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L LR       +  R  II +         FI+  +PIL+ ++ E   +      
Sbjct: 125 MDHRHLWLRSRRQAAIMQIRNAIIYASYEFFDQNGFIKFDSPILSGNAAENTTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
               +F  L Q+ Q Y +  +MA G  R F   P FR E  ++ R   EF+ +D E  F+
Sbjct: 185 FGNPAF--LSQSGQLYLEAGMMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYPFL 240

Query: 245 EQDDILNTMENVLRGVFE----------EFSNGNT------VSNNFLRICYDDAI---RR 285
             ++ L+  E  ++ + +          E    +T      ++  F R+ YDDAI   + 
Sbjct: 241 SHEESLDLQEAYVKAMIQGVLDRAPQALELLERDTELLKRYIAEPFKRVSYDDAISLLQE 300

Query: 286 YGTDKPDLRNPII----MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
           + TD      PI       +  E ++ + F V + +++    ++ + +    G   R  C
Sbjct: 301 HSTDDDADYEPIQHGDDFGSPHETWISNYFGVPTFVINYPASFKAFYMKPVPGNEERVLC 360


>gi|82778344|ref|YP_404693.1| lysyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|123728505|sp|Q32BV3|SYK_SHIDS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81242492|gb|ABB63202.1| lysine tRNA synthetase, constitutive [Shigella dysenteriae Sd197]
          Length = 505

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 130/288 (45%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295
            + +      E + G+        F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQNILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|317032210|ref|XP_001394242.2| lysine--tRNA ligase KRS1 [Aspergillus niger CBS 513.88]
          Length = 604

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 7/251 (2%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           VR++G ++  R  G  +IF DIR      QVVA    A   +    + E +   D + ++
Sbjct: 125 VRIAGRIYTKRASGAKLIFYDIRAEGVKVQVVAQAQHATGGVPFEAQHEHLRRGDIVGIV 184

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A ++ +LS     +P   FG ++  +  RF+ R+LDL  + 
Sbjct: 185 GFPGRTSPKNRADGELSIFATEVVLLSPCLHAIPSEHFGLQDKEQ--RFRQRYLDLIMND 242

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
             +N+ V R++I+  +R      +F+E  TP++ A +        V    +      +  
Sbjct: 243 KSRNVFVTRSKIVRYIRNFFDNRDFVEVETPMMNAIAGGATAKPFVTHHNDLDMNLFMRV 302

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  E +
Sbjct: 303 APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNLTEEL 361

Query: 257 LRGVFEEFSNG 267
           + G+ +  + G
Sbjct: 362 VSGLVKHITGG 372



 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 538 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 573


>gi|300087728|ref|YP_003758250.1| lysyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527461|gb|ADJ25929.1| lysyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 493

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 27/257 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEIAKSVRSEWVLCIDGL 76
           V ++G V   R  G + FLDIRD     Q+  +     +S+ F +      ++V     L
Sbjct: 57  VTVAGRVVSRRDMGKLCFLDIRDSSQKIQLFCSAKNLSESSIFSLKNLDIGDFVGATGQL 116

Query: 77  VMSRSAE----TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + +RS E    T N  II   ++   +K   L   E+               R + R+LD
Sbjct: 117 IRTRSGEPSVNTSNLVIINKSLQPLPEKWHGLQDTEK---------------RHRQRYLD 161

Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGS 190
           L  +   +NI + R  II+ +R  +    F+E  TP+L + +    AR F+        S
Sbjct: 162 LISNPEGRNIFITRCSIISGIRNFLNNNGFLEVETPVLQSQACGAAARPFVTYHNALDQS 221

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  GFD  ++I   FR+E       P EF  L+   ++ + +D++
Sbjct: 222 MY-LRIALELYLKRLLVGGFDGVYEIGRIFRNEGISVKHNP-EFTMLECYKAYADYNDMM 279

Query: 251 NTMENVLRGVFEEFSNG 267
           +  E ++ G+ E+   G
Sbjct: 280 DLTEKMVSGIVEQIYGG 296



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL   K++REV LFP
Sbjct: 452 ALEYGMPPTGGLGIGIDRLVMLLTNQKSIREVILFP 487


>gi|293394609|ref|ZP_06638903.1| lysine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291422918|gb|EFE96153.1| lysine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 505

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 131/291 (45%), Gaps = 23/291 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G 
Sbjct: 64  LGVEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGVYNEQFKKWDL---GD 120

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +
Sbjct: 121 ILGARGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
              +N  K R++I++ +R  M+   F+E  TP++    P GA  R F+          Y 
Sbjct: 178 EESRNTFKVRSQIMSGIRNFMVGRGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY- 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   
Sbjct: 236 LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIELT 294

Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDL 293
           E++ R + ++      V            F ++   +AI++Y   TD  DL
Sbjct: 295 ESLFRTLAQDVLGKTAVQYGDEVFDFGKPFEKLTMREAIKKYRPETDLADL 345



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F++   +K+  ++    +   Y  + + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFADQVAAKDAGDDEAMFYDEDYVTSLEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|187777499|ref|ZP_02993972.1| hypothetical protein CLOSPO_01074 [Clostridium sporogenes ATCC
           15579]
 gi|187774427|gb|EDU38229.1| hypothetical protein CLOSPO_01074 [Clostridium sporogenes ATCC
           15579]
          Length = 504

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 140/330 (42%), Gaps = 39/330 (11%)

Query: 5   RTHSCGDL--GVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++     D+ G  V ++G +   R HG   F DI D YG  Q+    +    E 
Sbjct: 44  RTHTSKEVKENYEDLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103

Query: 62  AKSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            K  ++     ++ + G V        + +I   Q+   + +          PLP     
Sbjct: 104 LKEYKTFDIGDIISVTGTVFKTKTGETSIHITDFQLVCKSLR----------PLPEKWHG 153

Query: 119 EYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                +R++ R++DL      RDT     +KRT II +MR  +    F+E  TPIL+  +
Sbjct: 154 LKDPDLRYRQRYVDLIINQDVRDTF----IKRTAIIKAMREFLDNRGFLEVETPILSPIA 209

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+          Y L  A + Y + L+  GF++ ++I   FR+E       P 
Sbjct: 210 GGAAAKPFITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283
           EF  +++  ++ + +D++   EN++  + E+      V            + R+   DA+
Sbjct: 268 EFTAIELYEAYADYNDMMEITENMVAYICEKVLGTTKVQYEGTEIDFTPPWRRLTMVDAV 327

Query: 284 RRY-GTDKPDLRNPIIMHNVTEHFVHSEFR 312
           + Y G D   +++ I    + +   H EF+
Sbjct: 328 KEYAGVDFNSIKDDIEARTIAKE-KHVEFK 356



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + GMPP GG+  GIDR++M L    ++R+V LFP
Sbjct: 460 SLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFP 495


>gi|300921221|ref|ZP_07137594.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300411827|gb|EFJ95137.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1]
          Length = 505

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 130/288 (45%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295
            + +      E + G+        F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQNILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|134078916|emb|CAK48307.1| unnamed protein product [Aspergillus niger]
          Length = 618

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 7/251 (2%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           VR++G ++  R  G  +IF DIR      QVVA    A   +    + E +   D + ++
Sbjct: 125 VRIAGRIYTKRASGAKLIFYDIRAEGVKVQVVAQAQHATGGVPFEAQHEHLRRGDIVGIV 184

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A ++ +LS     +P   FG ++  +  RF+ R+LDL  + 
Sbjct: 185 GFPGRTSPKNRADGELSIFATEVVLLSPCLHAIPSEHFGLQDKEQ--RFRQRYLDLIMND 242

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
             +N+ V R++I+  +R      +F+E  TP++ A +        V    +      +  
Sbjct: 243 KSRNVFVTRSKIVRYIRNFFDNRDFVEVETPMMNAIAGGATAKPFVTHHNDLDMNLFMRV 302

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  E +
Sbjct: 303 APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNLTEEL 361

Query: 257 LRGVFEEFSNG 267
           + G+ +  + G
Sbjct: 362 VSGLVKHITGG 372



 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 538 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 573


>gi|194467334|ref|ZP_03073321.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454370|gb|EDX43267.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 432

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 11/242 (4%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V++  W+   R  G I FL +RD  G  Q +   +    E   S + +        
Sbjct: 13  VGETVKIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNDVSEEKFDSAKHDLHQETSFW 72

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V    AE   +       E+  +  +I+  +E+ P+   G +E+        R L LR  
Sbjct: 73  VTGEIAEDKRSKF---GYEIHIKDFDIVGESEDYPI---GNKEHGIDFLLDNRHLWLRSR 126

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R+R+  +         F +   P LT S+PEG  +       ++ +F  L Q
Sbjct: 127 KPWALMRIRSRVKLATMEFFEKHGFTQFDAPELTGSAPEGTTELFETDYFDRSAF--LSQ 184

Query: 197 APQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           + Q Y +   MA G  R + + P FR E  ++ R   EF+ ++ EM+++ QD+ L   E 
Sbjct: 185 SGQLYAEAGAMALG--RVYTMGPTFRAEKSKTRRHLMEFWMIEPEMAWMHQDESLKIQEQ 242

Query: 256 VL 257
            +
Sbjct: 243 YI 244


>gi|331091968|ref|ZP_08340800.1| hypothetical protein HMPREF9477_01443 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330402867|gb|EGG82434.1| hypothetical protein HMPREF9477_01443 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 641

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 133/286 (46%), Gaps = 30/286 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F +++D  G  Q     D+   E  K  +   +  I G+ 
Sbjct: 57  GKDVSIAGRIMSKRVMGKASFCNVQDLQGNIQSYVARDNIGEEAYKEFKKMDIGDIVGI- 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
                +     +  G+I + AQ++ +LS + ++ LP          +R++ R++DL  + 
Sbjct: 116 ---KGDVFRTKM--GEISIHAQEVTLLSKSLQI-LPEKFHGLTNTDLRYRQRYVDLIMNP 169

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +    +KR++II+++R  +  + F+E  TPIL +++   A      +R  +  F AL +
Sbjct: 170 DVKDTFIKRSKIISAIRKYLDGQGFMEVETPILVSNAGGAA------ARPFETHFNALNE 223

Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                 + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++
Sbjct: 224 DFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMM 282

Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           +  EN+ R V +E      ++ N         F RI   DA+++Y 
Sbjct: 283 DLTENLYRYVAQEVLGTTKITYNGVEMDLGKPFERITMVDAVKKYA 328



 Score = 44.7 bits (104), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A +  MPP GGI  GIDR+ MLL  +  +R+V LFP
Sbjct: 454 ALEIAMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFP 489


>gi|251780464|ref|ZP_04823384.1| lysine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243084779|gb|EES50669.1| lysine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 501

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 123/258 (47%), Gaps = 20/258 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS----EWVLCI 73
           G  V ++G +   R  G ++F DI D  G  Q+    D    E  KS ++    +WV+  
Sbjct: 60  GKNVTVAGRIMSKRGQGKVVFSDIHDRDGKIQLFIKIDLVGEESLKSYKTYDLGDWVVAT 119

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             +  ++          TG++ +     E++  + + PLP          +R++ R +D+
Sbjct: 120 GEVFTTK----------TGEVSVKVSNFELICKSLK-PLPEKWHGLKDPDLRYRQREVDI 168

Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +  + +  +KR++II+ +R  +  + F+E  TPIL+  +    A+ F+          
Sbjct: 169 ITNPEVKETFIKRSKIISGIREFLDNKGFLEVETPILSPIAGGAAAKPFITHHNTLDMDM 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + Y + L+ +GF++ ++I   FR+E   S R   EF  +++  ++ + +D++ 
Sbjct: 229 Y-LRIATELYLKRLIVAGFEKVYEIGRNFRNEG-MSVRHNPEFTVIELYEAYSDYNDMME 286

Query: 252 TMENVLRGVFEEFSNGNT 269
             EN++  V E+  NG T
Sbjct: 287 ITENMVAYVCEKV-NGTT 303



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M L  + ++R+V LFP
Sbjct: 460 ALETGMPPTGGLGIGIDRLIMFLTDSTSIRDVLLFP 495


>gi|227364245|ref|ZP_03848340.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325683447|ref|ZP_08162963.1| asparagine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|227070727|gb|EEI09055.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324977797|gb|EGC14748.1| asparagine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 448

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 11/242 (4%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V++  W+   R  G I FL +RD  G  Q +   +    E   S + +        
Sbjct: 29  VGETVKIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNDVSEEKFDSAKHDLHQETSFW 88

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V    AE   +       E+  +  +I+  +E+ P+   G +E+        R L LR  
Sbjct: 89  VTGEIAEDKRSKF---GYEIHIKDFDIVGESEDYPI---GNKEHGIDFLLDNRHLWLRSR 142

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R+R+  +         F +   P LT S+PEG  +       ++ +F  L Q
Sbjct: 143 KPWALMRIRSRVKLATMEFFEKHGFTQFDAPELTGSAPEGTTELFETDYFDRSAF--LSQ 200

Query: 197 APQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           + Q Y +   MA G  R + + P FR E  ++ R   EF+ ++ EM+++ QD+ L   E 
Sbjct: 201 SGQLYAEAGAMALG--RVYTMGPTFRAEKSKTRRHLMEFWMIEPEMAWMHQDESLKIQEQ 258

Query: 256 VL 257
            +
Sbjct: 259 YI 260


>gi|330832585|ref|YP_004401410.1| asparaginyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329306808|gb|AEB81224.1| asparaginyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 448

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 115/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G + FL +RD     Q VA  P+          +  F++AK +
Sbjct: 15  VGQEVTIGAWVANKSGKGKLAFLQLRDGTAFFQAVALKPNFIEKFGEEAGTEKFDVAKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  +++ P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKFG-------YELDVTDLEVIGESQDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR          R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGQPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRYIAEPFKRVAYDDAI 295



 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ K   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDNYDALVAKMDELGMDKS--EYEFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|323971673|gb|EGB66902.1| lysyl-tRNA synthetase [Escherichia coli TA007]
          Length = 505

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 130/288 (45%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295
            + +      E + G+        F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQDILGKMEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|118383039|ref|XP_001024675.1| aspartyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|89306442|gb|EAS04430.1| aspartyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 604

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 3/139 (2%)

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R   R +DLR          ++ I    R  +++++F+E  TP L   S EG  +     
Sbjct: 282 RLDNRIIDLRTPAKQAIFRLQSGICQLFREYLLSQDFVEIHTPKLIGGSSEGGANIFKLK 341

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             ++ +   L Q+PQ YKQ+ + S F+R F+I P FR E   + R   EF  LD+EMS  
Sbjct: 342 YFDKDA--CLAQSPQLYKQMCIQSDFERVFEIGPVFRAEKSFTHRHMCEFTGLDIEMSIK 399

Query: 245 EQ-DDILNTMENVLRGVFE 262
           E   ++L+ M ++   +F+
Sbjct: 400 ENYHELLDLMGDLFVHIFK 418



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YD    G EI SG  RNH    + +  +  GI+ E +++    +  AF  G  PHGG
Sbjct: 516 TLSYDFFMRGQEITSGAQRNHDPVSLAKRAAECGINVETIKDYIESM--AF--GAYPHGG 571

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
              G++R+V L     ++R   LFP
Sbjct: 572 CGIGLERVVFLYCDLYDIRNGCLFP 596


>gi|315274625|ref|ZP_07869480.1| lysyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313615745|gb|EFR89018.1| lysyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 498

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 155/358 (43%), Gaps = 49/358 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F  I+D +   Q+    D+    I +   + + L   G ++  
Sbjct: 63  VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAIFKLADLGDIIGI 118

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                  N  TG++ + A +  +LS +   LP    G ++  +  R++ R+LDL  +   
Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           +N  V R++I+   R  M  + F+E  TP+L T +    A+ F+          Y L  A
Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++ +E ++
Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292

Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD---------------KP 291
             V ++  NG T          ++ N+ RI   DA++ Y G D               K 
Sbjct: 293 STVCKQV-NGTTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEARELAKKH 351

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343
           D+  P+  H    H ++  F  + +   + P + V+  P      AK    +  F DR
Sbjct: 352 DV--PVTEHMTYGHILNEFFETYVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG+  GIDR+VMLL  A ++R++ LFP  ++
Sbjct: 457 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 496


>gi|148545090|ref|YP_001272460.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184154423|ref|YP_001842764.1| asparaginyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|166980089|sp|A5VMP9|SYN_LACRD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|226695298|sp|B2GA02|SYN_LACRJ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148532124|gb|ABQ84123.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183225767|dbj|BAG26284.1| asparaginyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
          Length = 432

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 11/242 (4%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V++  W+   R  G I FL +RD  G  Q +   +    E   S + +        
Sbjct: 13  VGETVKIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNDVSEEKFDSAKHDLHQETSFW 72

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V    AE   +       E+  +  +I+  +E+ P+   G +E+        R L LR  
Sbjct: 73  VTGEIAEDKRSKF---GYEIHIKDFDIVGESEDYPI---GNKEHGIDFLLDNRHLWLRSR 126

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R+R+  +         F +   P LT S+PEG  +       ++ +F  L Q
Sbjct: 127 KPWALMRIRSRVKLATMEFFEKHGFTQFDAPELTGSAPEGTTELFETDYFDRSAF--LSQ 184

Query: 197 APQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           + Q Y +   MA G  R + + P FR E  ++ R   EF+ ++ EM+++ QD+ L   E 
Sbjct: 185 SGQLYAEAGAMALG--RVYTMGPTFRAEKSKTRRHLMEFWMIEPEMAWMHQDESLKIQEQ 242

Query: 256 VL 257
            +
Sbjct: 243 YI 244


>gi|254166510|ref|ZP_04873364.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596296|ref|YP_003482992.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624120|gb|EDY36681.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534083|gb|ADD08430.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 480

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 124/252 (49%), Gaps = 22/252 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLC 72
           +G  V ++G ++ +R HG + F D+RD+    Q     D    E    + K V     L 
Sbjct: 45  MGKKVAVAGRLYALRFHGKVAFGDLRDNGSKIQGFFRMDVLGEEQYKFLKKYVDRGDFLW 104

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFL 131
           I G V +R+ +        G++ + A++I++ S A  +LP   FG  +  +  R++ R+L
Sbjct: 105 IKGEV-TRTKK--------GELSVLAEEIKLASKALYDLPHEWFGIEDTEK--RYRQRYL 153

Query: 132 DL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ- 188
           DL   +D      +KR+ I   +R  +    F+E  TP+L      GA      + VN  
Sbjct: 154 DLMFNKDAFD-TFIKRSIIEKEIRMFLWNRGFLEMETPVLQPVYG-GANAKPFKTHVNAI 211

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  + + Y + L+  G+++ F+IA  FR+ED  +   P EF  +++  S+V+ +D
Sbjct: 212 DRDYYLRISDELYLKRLIVGGYNKVFEIAKDFRNEDIDTTHNP-EFTMIEIYQSYVDYND 270

Query: 249 ILNTMENVLRGV 260
           ++N  E +++ V
Sbjct: 271 MMNLTEEMIKHV 282



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 16/94 (17%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----------LYRAFQ 530
           +++L     E+A+G     +++ +LQ        +E VE R  G             A +
Sbjct: 388 RFELYVGSVELANG--YTELNDPLLQE----KFFREEVERRTLGDEEAHQYDEDFIEALR 441

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GMPP GG+  GIDR+ MLL G  +++EV LFP+
Sbjct: 442 WGMPPMGGVGIGIDRLTMLLTGNTSIKEVILFPI 475


>gi|300718199|ref|YP_003743002.1| Lysyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299064035|emb|CAX61155.1| Lysyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 506

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 13/257 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L   G 
Sbjct: 64  LGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL---GD 120

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +
Sbjct: 121 IVGARGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
              +   K R++I+  +R  M+   F+E  TP++    P GA  R F           Y 
Sbjct: 178 EESRKTFKIRSQIMAGIRSFMVGREFMEVETPMMQVI-PGGASARPFTTHHNALDIDMY- 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  +++ M++ +  D++   
Sbjct: 236 LRIAPELYLKRLVVGGFDRVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYKDLIELT 294

Query: 254 ENVLRGVFEEFSNGNTV 270
           E++ R + ++   GNTV
Sbjct: 295 ESLFRTLAQDIL-GNTV 310



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|198434726|ref|XP_002131983.1| PREDICTED: similar to lysyl-tRNA synthetase [Ciona intestinalis]
          Length = 576

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 115/253 (45%), Gaps = 22/253 (8%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           V ++G +H  R  G  +IF D+R      QV+AN      + A  EI +  R   ++ + 
Sbjct: 113 VSIAGRIHAKREAGPKLIFYDVRGDGVKLQVMANSKMYSSEEAYQEINERTRRGDIIGVI 172

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G           A    G++ +    IEILS     LP   FG ++  +  R++ R+LDL
Sbjct: 173 GHP---------AKTKKGELSIVPNTIEILSPCLHMLPHLHFGLKD--KETRYRQRYLDL 221

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF 191
              D   +  + R +II+ +R       F+E  TP++   +    A+ F+          
Sbjct: 222 IMNDQTRQKFITRAKIISYIRSFFDQMGFLEVETPMMNMVAGGATAKPFITHHNDLDMDL 281

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++ 
Sbjct: 282 Y-MRVAPELYLKMLVVGGLDRVYEIGRLFRNEGIDMTHNP-EFTSCEFYMAYADYEDLMK 339

Query: 252 TMENVLRGVFEEF 264
             E ++ G+ ++ 
Sbjct: 340 ISETLISGMVKQI 352



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 12/97 (12%)

Query: 476 SIKAF--QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK-------EVVENRFGGLY 526
           SIK    +++L  N  EI +     +   +  Q F    + K       ++V+  F    
Sbjct: 465 SIKGLTERFELFVNKKEICNAYTELNDPMIQRQRFEQQALDKAAGDDEAQMVDENFCT-- 522

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 523 -ALEYGLPPTGGWGMGIDRLTMFLTDSNNIKEVLLFP 558


>gi|289610261|emb|CBI60290.1| unnamed protein product [Sordaria macrospora]
          Length = 70

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 5/69 (7%)

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSN----GNTVSN-NFLRICYDDAIRRYGTDKPDLRN 295
           MSFV Q+D+   +E VL GVFEE+++    G TVS   F RI Y +++ +YG DKPDLRN
Sbjct: 1   MSFVTQEDVFAAIEPVLHGVFEEYADWQGKGRTVSPLPFKRIPYRESMLKYGNDKPDLRN 60

Query: 296 PIIMHNVTE 304
           P+++ +V++
Sbjct: 61  PLLITDVSD 69


>gi|120404304|ref|YP_954133.1| lysyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|296439672|sp|A1TAC7|LYSX_MYCVP RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|119957122|gb|ABM14127.1| lysyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 1100

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 110/224 (49%), Gaps = 17/224 (7%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEI 61
           +H+      ++ G+ V ++G V R R +GG++F  +RD  G TQ+V +     D +  + 
Sbjct: 646 SHTVAQALAAEDGADVAVAGRVLRSRDYGGVLFAQLRDWSGETQLVLDNSLLADGSTADF 705

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +++    ++ + G  M RS     + +++G   L  + +         PLP   +    
Sbjct: 706 TRTIDLGDLIEVTG-TMGRSRSGKWSLLVSGW-RLIGKCLR--------PLPDKWKGLTD 755

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R + R++DL  +T  + +++ R+ +++++R  ++A++F+E  TPIL        AR 
Sbjct: 756 QEARVRARYVDLAVNTDARELIRARSAVLHAIRETLVAKDFLEVETPILQQIHGGANARP 815

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           FL          Y L  AP+ Y + L   G +R F++   FR+E
Sbjct: 816 FLTHINAYDLDLY-LRIAPELYLKRLCVGGVERVFELGRAFRNE 858



 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +
Sbjct: 1008 AERWDLVAWGVELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAME 1063

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  G+DR+VML+ G +++RE   FP+++
Sbjct: 1064 YAMPPTGGLGMGVDRVVMLITG-RSIRETLPFPLAK 1098


>gi|50119719|ref|YP_048886.1| lysyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81646128|sp|Q6D945|SYK_ERWCT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|49610245|emb|CAG73688.1| lysyl tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 505

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 21/289 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + ++G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L  
Sbjct: 61  LEELGIEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
             +   +N  + R+ ++ ++R  M+   F+E  TP++    P GA  R F+         
Sbjct: 175 IANDDSRNTFRIRSNVMAAIRRFMVDNGFMEVETPMMQVI-PGGASARPFITHHNALDID 233

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++
Sbjct: 234 MY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLI 291

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT--DKPDLRNPI 297
              EN+ R + ++     TV        Y D    +G   DK  +R  I
Sbjct: 292 VLTENLFRTLTQDVLGSTTV-------VYGDQTFDFGKPFDKLTMREAI 333



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|157872175|ref|XP_001684636.1| aspartyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68127706|emb|CAJ05889.1| putative aspartyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 550

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 122/283 (43%), Gaps = 24/283 (8%)

Query: 2   HRYRTH-SCGDLGVSD-VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---- 55
           ++ RTH    +L   + V   V +   V   R  G + F+ +RD     Q +A  +    
Sbjct: 60  YKSRTHIPVSELSRPELVDKTVLIRARVSTTRKKGKMAFMVLRDGSDSVQAMAAVEGDVP 119

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPV 114
               +    + +E ++ ++  V     E    +     IEL  +KI  ++ +   LP  +
Sbjct: 120 KEMIDFMGQIATESIVDVEATVCK--VEQPITSTSHSDIELKVKKIHTVTESLRTLPFTL 177

Query: 115 --FGEREYPE------SIRFKYRFLDLRRDTLHKNIVKR--TRIINSMRCRMIAENFIEC 164
                +E  E        R   R++DLR  TL    + R  +R+    R  +I ++F E 
Sbjct: 178 EDASRKESAEGAKVNLDTRLNSRWMDLR--TLASGAIFRLQSRVCQYFRQFLIDKDFCEI 235

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            +P +  +  EG  +       N+  F  L Q+PQ YKQ+++     R F++ P FR E+
Sbjct: 236 HSPKIINAPSEGGANVFKLEYFNR--FAYLAQSPQLYKQMVLQGDVPRVFEVGPVFRSEN 293

Query: 225 PRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
             + R   EF  LD+EM   E   ++L+  E++   +FE  + 
Sbjct: 294 SNTHRHLTEFVGLDVEMRIDEHYYEVLDVAESLFNYIFERLAT 336



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 12/86 (13%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGIS--KEVVENRFGGLYRAFQCGMPPHG 537
           YD+   G EI+SG  R H  +++L      NV ++  KE V+        +F+ G  PHG
Sbjct: 465 YDMFIRGEEISSGAQRIHDPDLLLARAKMLNVDLTPIKEYVD--------SFRLGAWPHG 516

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G++R+VML LG  NVR  SLFP
Sbjct: 517 GFGIGLERVVMLYLGLSNVRLASLFP 542


>gi|260812197|ref|XP_002600807.1| hypothetical protein BRAFLDRAFT_229393 [Branchiostoma floridae]
 gi|229286097|gb|EEN56819.1| hypothetical protein BRAFLDRAFT_229393 [Branchiostoma floridae]
          Length = 373

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/310 (20%), Positives = 132/310 (42%), Gaps = 36/310 (11%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           GWV  +R    ++FL + D   +   QVV  PD    +++        + ++G +   + 
Sbjct: 1   GWVRSIRAQKEVLFLHLNDGSCLAHLQVVGTPDMGSSDLSYGS----AVAVEGRLFPSAH 56

Query: 83  ETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                    GQ +E  A ++E++        P   ++ +      ++  L  R ++    
Sbjct: 57  --------PGQDVEFHADRLEVIGSCNAKEFPFKAKKRHTMEYSRQFPHLRARTNSFAAL 108

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS------FYALP 195
           +  R++  +++      E +IE  TP+++++  EGA +     +++Q S      F+ +P
Sbjct: 109 LRIRSQAASAIHKFFQDEGYIEVHTPVISSNDCEGAGELFQVEQISQDSGKDTKHFFDVP 168

Query: 196 ---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILN 251
                  Q +  +MAS   R +   P FR E     R   EFY ++ E++F  +Q+D++ 
Sbjct: 169 AFLTVSGQLQLEVMASALSRVYVFGPTFRAERSLGRRHLSEFYMVEAELAFTQQQEDVME 228

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +E +++   E+           L +C +D    Y    P  R  ++   +T  F+   +
Sbjct: 229 VIEMMVKQPTEQ----------ILALCPEDLHLFYKFVSPGHRE-VVEKILTSRFIRMTY 277

Query: 312 RVFSKILSVN 321
               +IL+ N
Sbjct: 278 TEAIQILTKN 287


>gi|88603737|ref|YP_503915.1| lysyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|121725410|sp|Q2FSN8|SYK_METHJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|88189199|gb|ABD42196.1| lysyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 505

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 20/263 (7%)

Query: 24  SGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKS-VRSEWVLCIDGLVMS 79
           +G ++ VR HG   F D+RD  G  Q+    D+     F++ KS +    ++ + G +  
Sbjct: 60  AGRLYGVRDHGKTFFADLRDETGRIQLYIRKDALPEGKFQMFKSSIERGDIIGVTGRIFK 119

Query: 80  RSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                       G+I +    I +L+     LP    G     +  R++ R+LDL  +  
Sbjct: 120 TKV---------GEISIFVDDIILLTKTLCSLPEKFHGLTNLEK--RYRQRYLDLIVNEE 168

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
            +   + R+RII+ +R  +  + F+E  TP L        AR F           Y L  
Sbjct: 169 SRETFRTRSRIISLLRNYLTGQGFLEFETPTLQPLYGGANARPFTTFHNFLGQKLY-LRI 227

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF++ F++A  FR+ED  +   P EF  +++  ++ +  D++   E +
Sbjct: 228 APELYLKRLVVGGFEKVFEVAKNFRNEDIDTSHNP-EFSMVEIYQAYADYTDMMKLTEGI 286

Query: 257 LRGVFEEFSNGNTVSNNFLRICY 279
           +  +  E +    V+     I Y
Sbjct: 287 ISSIVHEVTGSYEVAFEENTISY 309



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP GG+  GIDR+VML+ G  +++EV LFP
Sbjct: 452 ALGYGMPPTGGVGIGIDRLVMLITGNTSIKEVILFP 487


>gi|257879864|ref|ZP_05659517.1| lysyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|294618638|ref|ZP_06698177.1| lysyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|257814092|gb|EEV42850.1| lysyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|291595157|gb|EFF26495.1| lysyl-tRNA synthetase [Enterococcus faecium E1679]
          Length = 498

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 133/305 (43%), Gaps = 38/305 (12%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L           ++++G    ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSEELHELFDPRTKEELAEMGLTASVAGRMMTRRGKGKTGFAHLQDREGQIQIYVRK 99

Query: 55  DSA---CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
           D      +E+ K         + G +M            TG++ + A +I ILS A   P
Sbjct: 100 DQVGDEAYEVFKHADLGDFFGVTGQIMKTD---------TGEVSIKASEITILSKALR-P 149

Query: 112 LPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           LP           R++ R+LDL   R++  +  +KR++II+ +R  +    +IE  TP+L
Sbjct: 150 LPDKYHGLTNIEQRYRQRYLDLISNRESFDR-FMKRSQIISEIRRYLDGNGYIEVETPVL 208

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + L+  G ++ ++I   FR+E   + 
Sbjct: 209 HNEAGGAAARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTT 267

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF-------SNGNTV--SNNFLRICY 279
             P EF  L+   ++ + +D++N  E ++R   E+         +G  V   ++F RI  
Sbjct: 268 HNP-EFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAVDLESDFKRIHM 326

Query: 280 DDAIR 284
            DAI+
Sbjct: 327 VDAIK 331



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP
Sbjct: 460 ALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495


>gi|157148426|ref|YP_001455745.1| lysyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|166229805|sp|A8AP96|SYK_CITK8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157085631|gb|ABV15309.1| hypothetical protein CKO_04251 [Citrobacter koseri ATCC BAA-895]
          Length = 505

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I+  +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQIMAGIRQFMVGRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295
            + +      E   G+ V      F ++   +AI++Y   TD  DL N
Sbjct: 300 TLAQDILGKTEVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDN 347



 Score = 44.3 bits (103), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F +   +KE  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFQDQVNAKEAGDDEAMFYDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|258592406|emb|CBE68715.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [NC10 bacterium
           'Dutch sediment']
          Length = 500

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 124/274 (45%), Gaps = 25/274 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVL 71
           +D    V ++G +  +R HG + F  ++D  G  Q+  + D   +  +++ K +     L
Sbjct: 50  TDAAPEVAIAGRLMSLRHHGKVTFAHLQDGSGRMQIYLSRDVLGAQLYDLCKRLDVGDHL 109

Query: 72  CIDG-LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            ++G L  +R+ E     +  G + L ++ +         PLP           RF+ R+
Sbjct: 110 GVEGQLFRTRTGEL---TVRVGTVRLLSKSLR--------PLPEKWHGLTDVETRFRQRY 158

Query: 131 LDLRRDTLHKNIV----KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSR 185
           LDL    +++ +     KR+R+I  +R    +  F+E  TP++ + +    AR F+    
Sbjct: 159 LDL---IVNRQVADAFRKRSRLIAEIRRFFESREFLEVETPMMQSMAGGAMARPFVTHHN 215

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ Y + L+  GFDR F+I   FR+E   +   P EF  L+   ++ +
Sbjct: 216 ALDIKLY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISTQHNP-EFTMLEFYQAYAD 273

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
            +D++   E +L  + +  +    V+    +I +
Sbjct: 274 YEDLMAMTEEMLAHLAKGITGDQQVTYQGQQISF 307



 Score = 45.1 bits (105), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+ MLL  + ++R+V LFP+
Sbjct: 449 RALEYGMPPTAGEGIGIDRLAMLLTDSPSIRDVILFPL 486


>gi|301633224|gb|ADK86778.1| asparagine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 455

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 114/268 (42%), Gaps = 21/268 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH---YGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           ++L+GW+   R    IIFL++ D      +  VV       F +A+S+     + + G V
Sbjct: 21  IKLTGWLKNKRTSANIIFLEVNDGSTLLNLQAVVKQDQPELFALAESISLASAVSVSGTV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRRD 136
               A T  +      +EL  ++I +LS A  + PL    ++E+         +L +R  
Sbjct: 81  ----ALTPKSK---QPLELVVKQINVLSTARADYPLQ---KKEHSLEFFRNNAYLRVRAR 130

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY---- 192
           T    +  R+ +  ++       +F+   +PILT++  EGA +      + QG  +    
Sbjct: 131 TYFAIMKVRSLLSQAIFDYFFKNDFVLVHSPILTSNDCEGAGETF---ELKQGKEFFNKT 187

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                  Q+     A  F + F   P FR E   + R   EF+ ++ E++F    D++  
Sbjct: 188 TYLTVSGQFGAECYAQAFKKVFTFGPTFRAEKSHTSRHLSEFWMIEPEVAFANLKDLIKL 247

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYD 280
           +E+ ++ V ++         +FL   +D
Sbjct: 248 IESTVKTVIKQVMQKAKQELDFLEKQFD 275


>gi|295694794|ref|YP_003588032.1| lysyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295410396|gb|ADG04888.1| lysyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 513

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 121/262 (46%), Gaps = 14/262 (5%)

Query: 7   HSCGDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           H  GD    ++   G  VR++G +   R HG   F  I D  G  Q+    D    E A 
Sbjct: 62  HFAGDRSKEELEQEGLHVRVAGRIMTKRGHGKASFAHILDRSGQIQIYVRLDRVG-EFAY 120

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V   + +   G ++    E +  N   G++ + A ++E+L+ +   PLP          
Sbjct: 121 QV---FDMLDLGDIIGVEGEVLRTN--RGEVTIFADRVELLTKSLR-PLPTKWHGLKDVE 174

Query: 124 IRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
           +R+++R++DL  +  + +  V R+RII  MR  +  + F+E  TP + + +    AR F+
Sbjct: 175 LRYRHRYVDLIVNPQVRETFVLRSRIIRVMRRFLDDQGFLEVETPTMQSVAGGAAARPFV 234

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y +  A + + + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 235 THHNALNMELY-MRIAMELHLKRLIVGGLERVYEIGRVFRNEGISTKHNP-EFTMMELYQ 292

Query: 242 SFVEQDDILNTMENVLRGVFEE 263
           ++ +  D+++  EN++  +  E
Sbjct: 293 AYADFRDMMDLTENLIVTIARE 314



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GG+  G+DR+VMLL    ++R+V LFP+ ++
Sbjct: 473 ALEYGMPPTGGLGIGVDRLVMLLTDQASIRDVLLFPLMRD 512


>gi|289806182|ref|ZP_06536811.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 74

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/73 (42%), Positives = 45/73 (61%)

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
           LP+       E  R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT 
Sbjct: 2   LPLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTK 61

Query: 172 SSPEGARDFLVPS 184
           ++PEGARD+LVPS
Sbjct: 62  ATPEGARDYLVPS 74


>gi|114673283|ref|XP_001138861.1| PREDICTED: asparaginyl-tRNA synthetase isoform 1 [Pan troglodytes]
          Length = 518

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 113/289 (39%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V             +  E   C +G+
Sbjct: 95  GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 141

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           ++S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 142 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 201

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ +    R       + E + P L  +  EG           
Sbjct: 202 NRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 261

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  D
Sbjct: 262 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 318

Query: 248 DILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAI 283
           D+LN +E+++  V +                N       F R+ Y DAI
Sbjct: 319 DLLNRLEDLVCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAI 367


>gi|326474941|gb|EGD98950.1| lysyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326483843|gb|EGE07853.1| lysyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 609

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 126/253 (49%), Gaps = 11/253 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           VR++G ++  R  G  +IF D+R      QV      A  ++    + E +   D + ++
Sbjct: 128 VRIAGRIYTKRSSGAKLIFYDLRAEGVKVQVACQAQEATGDVPFEAQHEQLRRGDIVGII 187

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A+++ +LS    ++P   +G ++  +  RF+ R+LDL  + 
Sbjct: 188 GFPGRTNPKNRDDGELSIFARQVILLSPCLHQIPSEHYGLKD--QEQRFRQRYLDLIMND 245

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194
             +N+ V R++I++ +R      +F+E  TP++ A +    A+ F+   + +N   F  +
Sbjct: 246 SSRNVFVTRSKIVSYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHHNELNMNLFMRI 305

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  E
Sbjct: 306 --APELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDLMNVTE 362

Query: 255 NVLRGVFEEFSNG 267
           +++ G+ +  + G
Sbjct: 363 DLVSGLVKHVTGG 375



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576


>gi|258647926|ref|ZP_05735395.1| asparagine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260851765|gb|EEX71634.1| asparagine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 467

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 117/276 (42%), Gaps = 34/276 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L  +D  + V + GWV   R    +IF+ + D   I   Q+VA+ ++   E+ 
Sbjct: 6   RTKIIDVLKRTDFDTVVNVRGWVRTKRGSKNVIFIALNDGSTINNVQIVADTEAFDAELV 65

Query: 63  KSVRSEWVLCIDG-LVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGER-E 119
           K + +   L ++G LV S+ +  +        +E+ A++IEIL +   + P+   G+  E
Sbjct: 66  KDITTGACLSVNGALVQSQGSGQV--------VEIQAKEIEILGTCGSDFPMQKKGQSFE 117

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           Y      +Y  + LR +T       R  +  ++        F    TPI+TAS  EGA  
Sbjct: 118 YMR----QYAHMRLRTNTFGAVFRIRHNMAMAIHHYFHEHGFFYFHTPIITASDCEGAGQ 173

Query: 180 FLVPSRVN--------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRD 222
               +  N                 F+  P +     QL   L A+     +   P FR 
Sbjct: 174 MFQVTTKNLYDLKKDENGKIDYSDDFFGKPTSLTVSGQLEGELGATSLGAIYTFGPTFRA 233

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           E+  + R   EF+ ++ E++F +  D ++  E+ L+
Sbjct: 234 ENSNTPRHLAEFWMIEPEVAFNDITDNMDLAEDFLK 269


>gi|227543674|ref|ZP_03973723.1| asparagine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300908734|ref|ZP_07126197.1| asparagine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227186358|gb|EEI66429.1| asparagine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300894141|gb|EFK87499.1| asparagine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 448

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 11/242 (4%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V++  W+   R  G I FL +RD  G  Q +   +    E   S + +        
Sbjct: 29  VGETVKIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNDVSEEKFDSAKHDLHQETSFW 88

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V    AE   +       E+  +  +I+  +E+ P+   G +E+        R L LR  
Sbjct: 89  VTGEIAEDKRSKF---GYEIHIKDFDIVGESEDYPI---GNKEHGIDFLLDNRHLWLRSR 142

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R+R+  +         F +   P LT S+PEG  +       ++ +F  L Q
Sbjct: 143 KPWALMRIRSRVKLATMEFFEKHGFTQFDAPELTGSAPEGTTELFETDYFDRSAF--LSQ 200

Query: 197 APQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           + Q Y +   MA G  R + + P FR E  ++ R   EF+ ++ EM+++ QD+ L   E 
Sbjct: 201 SGQLYAEAGAMALG--RVYTMGPTFRAEKSKTRRHLMEFWMIEPEMAWMHQDESLKIQEQ 258

Query: 256 VL 257
            +
Sbjct: 259 YI 260


>gi|312869229|ref|ZP_07729401.1| asparagine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311095250|gb|EFQ53522.1| asparagine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 432

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 19/232 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAK-SVRSEWVLC 72
           VG  VR+  W+   R  G I FL +RD  G  Q +    + D   FE+AK  +  E    
Sbjct: 13  VGETVRIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNDVDEETFELAKHDLHQETSFY 72

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G +                 E+    I+++  ++E P+   G +E+       +R L 
Sbjct: 73  VTGEIAEDKRSKFG-------YEIHITDIDVVGTSDEYPI---GNKEHGIDFLLDHRHLW 122

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       +  R+R+  +         F +   PILT S+PEG  +       ++ ++ 
Sbjct: 123 LRSRKPWALMRIRSRVKLATMEFFNKHGFTQFDAPILTGSAPEGTTELFETDYFDRSAY- 181

Query: 193 ALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            L Q+ Q Y +   MA G  R + + P FR E  ++ R   EF+ ++ EM++
Sbjct: 182 -LSQSGQLYGEAGAMALG--RIYTMGPTFRAEKSKTRRHLMEFWMIEPEMAW 230


>gi|302658888|ref|XP_003021142.1| hypothetical protein TRV_04757 [Trichophyton verrucosum HKI 0517]
 gi|291185024|gb|EFE40524.1| hypothetical protein TRV_04757 [Trichophyton verrucosum HKI 0517]
          Length = 620

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 126/253 (49%), Gaps = 11/253 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           VR++G ++  R  G  +IF D+R      QV      A  ++    + E +   D + ++
Sbjct: 128 VRIAGRIYTKRSSGAKLIFYDLRAEGVKVQVACQAQEATGDVPFEAQHEQLRRGDIVGIV 187

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A+++ +LS    ++P   +G ++  +  RF+ R+LDL  + 
Sbjct: 188 GFPGRTNPKNRDDGELSIFARQVILLSPCLHQIPSEHYGLKD--QEQRFRQRYLDLIMND 245

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194
             +N+ V R++I++ +R      +F+E  TP++ A +    A+ F+   + +N   F  +
Sbjct: 246 SSRNVFVTRSKIVSYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHHNELNMNLFMRI 305

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  E
Sbjct: 306 --APELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDLMNVTE 362

Query: 255 NVLRGVFEEFSNG 267
           +++ G+ +  + G
Sbjct: 363 DLVSGLVKHVTGG 375



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576


>gi|257463162|ref|ZP_05627562.1| lysyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060754|ref|ZP_07925239.1| lysyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313686430|gb|EFS23265.1| lysyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 493

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 121/274 (44%), Gaps = 19/274 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDG-LV 77
           + +G +   R  G I F  I D  G  Q+    D      F + K +    V+ ++G L 
Sbjct: 57  KTAGRIMSFRRKGKIAFAHIEDQTGKIQIYVKQDEVGEEAFRLIKMLNVGDVIGVEGTLF 116

Query: 78  MSRSAE-TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++ + E T+  NI+T    L  + I  L      P    G  +     R +Y  L + RD
Sbjct: 117 ITHTGELTLRGNIVT----LLTKNIRAL------PEKFHGLTDVETRYRKRYVDLIMNRD 166

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
            + +  +KRT II  ++  +    F+E  TP++        AR F+          Y + 
Sbjct: 167 -VKETFLKRTMIIKELKKYLDDRGFLEVETPMMHPIVGGAAARPFVTHHNTLDIDLY-MR 224

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GFD+ + +  CFR+E   +   P EF  +++  ++ + +D+++  E 
Sbjct: 225 IAPELYLKKLIVGGFDKVYDLNKCFRNEGMSTRHNP-EFTTVELYQAYADFNDMMDLTEG 283

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
           V+  + ++ +    +S + + +   D  R +  D
Sbjct: 284 VITSLCQKVNGTYDISFDGVDLHLKDFKRVHMVD 317



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL GA ++R+V LFP
Sbjct: 452 ALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVILFP 487


>gi|289433583|ref|YP_003463455.1| lysyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289169827|emb|CBH26365.1| lysyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 498

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/356 (22%), Positives = 152/356 (42%), Gaps = 45/356 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F  I+D +   Q+    D+    I +   + + +   G ++  
Sbjct: 63  VTVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKIADLGDIIGI 118

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                  N  TG++ + A +  +LS +   LP    G ++  +  R++ R+LDL  +   
Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           +N  V R++I+   R  M  + F+E  TP+L T +    A+ F+          Y L  A
Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++ +E ++
Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292

Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD-------------KPDL 293
             V E+  NG T          ++  + RI   DA++ Y G D               + 
Sbjct: 293 STVCEQV-NGTTKITYGEYDVDLTPKWRRIHMADAVKEYVGVDFWNVTSDEEAHQLAKEH 351

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343
             P+  H    H ++  F  F +   + P + V+  P      AK    +  F DR
Sbjct: 352 NVPVTKHMTYGHILNEFFETFVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG+  GIDR+VMLL  A ++R++ LFP  ++
Sbjct: 457 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 496


>gi|322411433|gb|EFY02341.1| asparaginyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 448

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 115/295 (38%), Gaps = 42/295 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+          +A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQAVAFKPNFIERFGEEEGAAKFDTIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 75  SQETSVFVKGIVKEDERSKFG-------YELDVTDIEVIGESQDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E   +      
Sbjct: 125 MDNRHLWLRSRRQAAIMQIRNAIIYASYEFFDQNGFIKFDSPILSGNAAENTTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
               +F  L Q+ Q Y +  +MA G  R F   P FR E  ++ R   EF+ +D E  F+
Sbjct: 185 FGNPAF--LSQSGQLYLEAGMMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYPFL 240

Query: 245 EQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
             ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 241 SHEESLDLQEAYVKAMIQGVLDRAPQALETLERDTDLLKKYIAEPFKRVAYDDAI 295


>gi|261392312|emb|CAX49838.1| lysyl-tRNA synthetase (lysine--tRNA ligase; LysRS) [Neisseria
           meningitidis 8013]
          Length = 503

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--QGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    ++ N         F R+   DAI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASRAVNGTANITYNGKEVDLESPFERLTILDAIKKY 335



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|226303560|ref|YP_002763518.1| lysyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|296439700|sp|C0ZL89|LYSX_RHOE4 RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|226182675|dbj|BAH30779.1| probable lysyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 1104

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 19/225 (8%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      S  G+ VR++G + RVR +GG++F D+RD  G  QV+ + D+   E     
Sbjct: 649 THTIAAAAKSPEGTRVRIAGRLLRVRDYGGVVFTDVRDWSGDIQVLVDQDNVGREKLAEF 708

Query: 66  RSEW----VLCIDGLV-MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            +E+    ++ + G +  SR  E    ++I  +  ++ + +         PLP   +   
Sbjct: 709 AAEFDLGDLIEVSGTIGRSRKGEL---SLIAVEWRMNGKCLH--------PLPDKWKGLS 757

Query: 121 PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGAR 178
               R + R+LD+  +   + +++ R+ ++ S+R  +    ++E  TPIL        A 
Sbjct: 758 DPETRVRQRYLDIALNPKARELLEARSAVVKSLRDSLGGRGYLEVETPILQQVHGGANAA 817

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            FL          Y L  AP+ Y + L  +G ++ F+I   FR+E
Sbjct: 818 PFLTHINAYNLDLY-LRIAPELYLKRLCVAGMEKVFEIGRVFRNE 861



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           RN ++E  + A      + E+ E+      +A +
Sbjct: 1011 AEKWDLVAWGVELGTAYSELTDPVDQRNRLTEQSMLAAGGDPEAMELDED----FLQALE 1066

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  G+DRIVML+ G  ++RE   FP+++
Sbjct: 1067 HAMPPTGGLGMGVDRIVMLITGG-SIRETLAFPLAK 1101


>gi|188587577|ref|YP_001919618.1| lysyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|188497858|gb|ACD50994.1| lysyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 501

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 129/274 (47%), Gaps = 23/274 (8%)

Query: 5   RTHSCGDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++  +     G  V ++G +   R  G ++F DI D  G  Q+    D    E 
Sbjct: 44  RTHTSEEVKSNYEELEGKNVTVAGRIMSKRGQGKVVFSDIHDRDGKIQLFIKIDLVGEES 103

Query: 62  AKSVRS----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            KS ++    +WV+    +  ++          TG++ +     E++  + + PLP    
Sbjct: 104 LKSYKTYDLGDWVVATGEVFTTK----------TGEVSIKVSNFELICKSLK-PLPEKWH 152

Query: 118 REYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
                 +R++ R +D+  +  + +  +KR++II+ +R  +    F+E  TPIL+  +   
Sbjct: 153 GLKDPDLRYRQREVDIITNPEVKETFIKRSKIISGIREFLDNRGFLEVETPILSPIAGGA 212

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            A+ F+          Y L  A + Y + L+ +GF++ ++I   FR+E   S R   EF 
Sbjct: 213 AAKPFITHHNTLDMDMY-LRIATELYLKRLIVAGFEKVYEIGRNFRNEG-MSVRHNPEFT 270

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
            +++  ++ + +D++   EN++  V E+  NG T
Sbjct: 271 VIELYEAYSDYNDMMEITENMVAYVCEKV-NGTT 303



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++M L  + ++R+V LFP
Sbjct: 460 ALETGMPPTGGLGIGIDRLIMFLTDSTSIRDVLLFP 495


>gi|146312949|ref|YP_001178023.1| lysyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166980067|sp|A4WE42|SYK_ENT38 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|145319825|gb|ABP61972.1| lysyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 505

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGIYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL   D   
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           K    R++I+  +R  M+  +F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 KTFKIRSQIMAGIRQFMVGRDFMEVETPMMQVI-PGGASARPFVTHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298

Query: 258 RGVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +      E   G+ V      F+++   +AI++Y   T+  DL N
Sbjct: 299 RTLAQNILGTTEVPYGDEVFDFGKPFVKLTMREAIKKYRPETEMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|301113228|ref|XP_002998384.1| lysyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262111685|gb|EEY69737.1| lysyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 544

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 94/172 (54%), Gaps = 7/172 (4%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           G++ +  +K+E+L+   +  P   +G +E PE IRF+ ++LDL  +   + I + R +++
Sbjct: 152 GELSIIPRKLEVLAPCIQPFPNSKYGIKE-PE-IRFRKKYLDLLTNPSVRPIFETRAKVV 209

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R  +   NFIE  TP+L +A+    A+ F+  SR      Y L  AP+ + + L+  
Sbjct: 210 RGIRKYLEDRNFIEVETPMLFSAAGGAAAQPFVTNSRALGKDLY-LRIAPELFLKQLVIG 268

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           GFDR F+I   FR+E   +   P EF   +   ++ + + +++T E ++ G+
Sbjct: 269 GFDRVFEIGKVFRNEGIDATHNP-EFTICEFYQAYADYNTLMDTAEEMISGI 319



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   G+DR+VMLL G  ++REV +FP
Sbjct: 497 ALEYGLPPTGGFGIGVDRLVMLLSGKPHIREVIMFP 532


>gi|156083701|ref|XP_001609334.1| aspartyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796585|gb|EDO05766.1| aspartyl-tRNA synthetase, putative [Babesia bovis]
          Length = 557

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 116/266 (43%), Gaps = 28/266 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF-----EIAKSVRSEWVLC 72
           G  V L G ++ VR  G + F+ +R  +   Q + +           + A S+  E ++ 
Sbjct: 135 GQVVWLRGRINDVRGKGTMTFIILRQQHESLQCIVDSRQEMVSKDMAKWAASLSMESIVD 194

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGER------------- 118
           + G V+       +    T + EL   K+  +S A   +P  +                 
Sbjct: 195 VLGKVVRPEVPVTST---TAKCELQVHKLICISKANPTMPFLIRDANNTDDEEACKNPSV 251

Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +  +  R   R LDLR  TL+  I K ++ I    R  ++  +FIE  +P L   + EG
Sbjct: 252 IKVNQDTRLDNRPLDLRA-TLNLAIFKIQSEICQQFRNFLLKRDFIEIHSPKLLGGTSEG 310

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +       +  +   L Q+PQ YKQL +   F R F+I P FR E+  + R   EF  
Sbjct: 311 GCNVFKLKYFDNDA--CLAQSPQLYKQLAVVGDFRRVFEIGPVFRAENSNTHRHLCEFVG 368

Query: 237 LDMEMSFVEQD-DILNTMENVLRGVF 261
           LDMEM   +   ++++ ++++L+ VF
Sbjct: 369 LDMEMEIRDNYMEVVDLIDDMLKHVF 394


>gi|62897229|dbj|BAD96555.1| asparaginyl-tRNA synthetase variant [Homo sapiens]
          Length = 548

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 113/289 (39%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V             +  E   C +G+
Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 171

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           ++S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 172 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 231

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ +    R       + E + P L  +  EG           
Sbjct: 232 NRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 291

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  D
Sbjct: 292 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 348

Query: 248 DILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAI 283
           D+LN +E+++  V +                N       F R+ Y DAI
Sbjct: 349 DLLNRLEDLVCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRVNYSDAI 397


>gi|301057954|ref|ZP_07199011.1| lysine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300447921|gb|EFK11629.1| lysine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 493

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 19/267 (7%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDG 75
           S  R++G +   R  G   F+ I+D  G  Q     +      FE  K +     + I G
Sbjct: 56  SSYRVAGRIVSKRDFGKASFIHIKDRSGRIQAYVRKNKVKEGQFETFKLMDIGDFVGIRG 115

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-R 134
            +             TG++ L A+ + +LS +   PLP           R++ R++DL  
Sbjct: 116 PLFRTK---------TGELTLLAEDMVLLSKSMR-PLPEKWHGLTDVETRYRQRYVDLIM 165

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFY 192
            D +    V R+RII ++R   I+ +F+E  TP++    P GA  R F+          Y
Sbjct: 166 NDPVRDVFVTRSRIIQAIRQFFISRDFLEVETPMM-QPIPGGATARPFITHHNALDMDLY 224

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  GF+R F+I   FR+E       P EF  ++  M++   +D++  
Sbjct: 225 -LRVAPELYLKRLVVGGFERVFEINRNFRNEGLSIKHNP-EFTMMEFYMAYATYEDLMVL 282

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICY 279
            E V   + ++ + G  +     RI +
Sbjct: 283 TEEVFGYLLDQVAGGQVIEYQGKRIDF 309



 Score = 44.7 bits (104), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 452 ALEYGMPPTAGEGIGIDRVVMLLTDSPSIRDVILFP 487


>gi|291390507|ref|XP_002711778.1| PREDICTED: lysyl-tRNA synthetase isoform 1 [Oryctolagus cuniculus]
          Length = 596

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFE-----IAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN  +   E     I   +R   ++ + 
Sbjct: 125 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFTRINNKLRRGDIIGVQ 184

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 185 G---------NPGKTKKGELSIIPHEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 233

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 234 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 292

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 293 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 350

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  + G TV+
Sbjct: 351 EITEKMISGMVKHVTGGYTVT 371



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 8/62 (12%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM--------SQNFCDLLMGSPSTV 579
           A + G+PP  G   GIDR+ M L  + N++EV LFP         S    D L  SP   
Sbjct: 535 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDKKESVAATDTLESSPVGT 594

Query: 580 SV 581
           SV
Sbjct: 595 SV 596


>gi|260588923|ref|ZP_05854836.1| lysine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540702|gb|EEX21271.1| lysine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 646

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 128/286 (44%), Gaps = 30/286 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V L+G +   R  G   F  I+D  G  Q     D+   +  K  +   +  I G+ 
Sbjct: 58  GKSVSLAGRMMSKRVMGKASFCSIQDVQGSIQSYVARDNIGEDHYKDFKKMDIGDIVGI- 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                E       TG+I + A ++ +LS + + PLP          +R++ R++DL  + 
Sbjct: 117 ---KGEVFKTK--TGEISIHATEVTLLSKSLK-PLPEKFHGLTNTDLRYRQRYVDLIMNA 170

Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +    +KR++II S+R  +  + F+E  TP+L A++   A      +R  +  F AL +
Sbjct: 171 DVKDTFIKRSKIIASIRNYLNGQGFLEVETPMLVANAGGAA------ARPFETHFNALDE 224

Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                 + + Y + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +   ++
Sbjct: 225 DFKLRISLELYLKRLIVGGMEKVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYHGMM 283

Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           +  EN+ R V +E      +  N         F RI   DA+++Y 
Sbjct: 284 DLTENLYRHVAQEVLGTTKIVYNGIEMDLGKPFERITMVDAVKKYA 329



 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GM P GGI  GIDR+VMLL  +  +R+V LFP
Sbjct: 455 ALEIGMAPTGGIGFGIDRMVMLLTDSAAIRDVLLFP 490


>gi|260825387|ref|XP_002607648.1| hypothetical protein BRAFLDRAFT_123951 [Branchiostoma floridae]
 gi|229292996|gb|EEN63658.1| hypothetical protein BRAFLDRAFT_123951 [Branchiostoma floridae]
          Length = 454

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 96/223 (43%), Gaps = 23/223 (10%)

Query: 27  VHRVRPHGGIIFLDIRDH-YGITQVVANPDSAC----FEIAKSVRSEWVLCIDGLVMSRS 81
           +H  R  G   FL +R   + +  +V   D        + A ++  E ++ ++G+V    
Sbjct: 1   MHTSRAKGKQCFLVLRQQQFNVQALVFVNDKTVSKQMVKFAANITKESIIDVEGVVQK-- 58

Query: 82  AETINANIITGQIELSAQK-IEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                   +   +E   Q+ +E+    E+   P   +       R   R +DLR  T   
Sbjct: 59  --------VAQPVESCTQRDVELHVEREDASRPRVNQ-----DTRLDNRIIDLRTTTNQA 105

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
                  + +  R  +  + F+E  TP + +++ EG  +    S     ++  L Q+PQ 
Sbjct: 106 VYRVVAGVCDLFRATLTGKGFVEIHTPKIISAASEGGANVFTVSYFKNNAY--LAQSPQL 163

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           YKQ+ +A+ F++ F +   FR ED  + R   EF  LD+EM+F
Sbjct: 164 YKQMAIAADFEKVFTVGAVFRAEDSNTHRHLTEFVGLDLEMAF 206



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 4/85 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+   G EI SG  R H  E + +      I  E +++       +F+ G PPHGG
Sbjct: 366 ANSYDMYMRGEEILSGAQRIHDPEFLTERAKAHEIDIEKIKSYID----SFRYGCPPHGG 421

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
              G++R+VML LG  N+R+ S+FP
Sbjct: 422 GGIGMERVVMLYLGLNNIRKTSMFP 446


>gi|37527421|ref|NP_930765.1| lysyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|39932032|sp|Q7N1C8|SYK_PHOLL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|36786856|emb|CAE15921.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 504

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 144/340 (42%), Gaps = 33/340 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + G +   R  G   F+ ++D  G  Q+    D     I      +W L   G ++  
Sbjct: 67  VTVGGRMMTRRIMGKASFVTLQDMGGRIQLYVARDDLPEGIYNEQFKKWDL---GDILGA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL   +   
Sbjct: 124 RGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANEESR 180

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           K    R++++ ++R  M+++ F+E  TP++        AR F+          Y L  AP
Sbjct: 181 KTFQIRSQVLLALRSFMVSKGFMEVETPMMQVIPGGAAARPFITHHNALDIDMY-LRIAP 239

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++  +E + R
Sbjct: 240 ELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLIEELFR 298

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
                     T++ N L     + + +YG  + D   P     + E     ++R  + I 
Sbjct: 299 ----------TLTQNIL----GNTLVKYGEQEFDFGKPFAQMTMKEAIC--KYRPETNIA 342

Query: 319 SVNPGYEVWAIP-------AKGGGGNRAFCDRMNEWARSQ 351
            ++   +V AI         KG G  R  C+   E A S 
Sbjct: 343 DLDDMDKVVAIAESLGIEVEKGWGLGRVQCEIFEETAESH 382



 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G+  GIDR++MLL  +  +R+V LFP
Sbjct: 463 ALEHGMPPTAGLGIGIDRMIMLLTDSHTIRDVILFP 498


>gi|303230964|ref|ZP_07317707.1| lysine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514346|gb|EFL56345.1| lysine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 504

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 25/244 (10%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVMS 79
           ++G +  +R HG   F +IRD  G  QV    D      ++  K +    ++ I+G V  
Sbjct: 61  IAGRLMTMRSHGKTAFANIRDLTGDIQVYFRKDVLGEDNYKYVKMLDIGDIVGIEGHVFR 120

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----R 134
                      +G++ +   K+ +LS A   PLP          +R++ R++DL      
Sbjct: 121 TH---------SGEVTIKVNKLTLLSKALR-PLPEKWHGLKDTELRYRQRYVDLIVNPEV 170

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           RDT     +KR++I+  +R  M+ + F+E  TP++        AR F+          Y 
Sbjct: 171 RDTF----IKRSKIVAKIREYMMNDGFMEVETPMMHPIPGGAAARPFITHHNALDIDIY- 225

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  AP+ Y + L+  G +R F++  CFR+E   +   P EF  ++   ++ + +D +   
Sbjct: 226 MRIAPELYLKRLIVGGMERVFEMNRCFRNEGIDNRHNP-EFTTIESYQAYGDVEDAIRLT 284

Query: 254 ENVL 257
           EN++
Sbjct: 285 ENLV 288



 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G+PP  G+  GIDR+VM L  + ++R+V LFP+
Sbjct: 453 ALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLFPL 489


>gi|302499425|ref|XP_003011708.1| hypothetical protein ARB_01935 [Arthroderma benhamiae CBS 112371]
 gi|291175261|gb|EFE31068.1| hypothetical protein ARB_01935 [Arthroderma benhamiae CBS 112371]
          Length = 620

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 126/253 (49%), Gaps = 11/253 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           VR++G ++  R  G  +IF D+R      QV      A  ++    + E +   D + ++
Sbjct: 128 VRIAGRIYTKRSSGAKLIFYDLRAEGVKVQVACQAQEATGDVPFEAQHEQLRRGDIVGIV 187

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A+++ +LS    ++P   +G ++  +  RF+ R+LDL  + 
Sbjct: 188 GFPGRTNPKNRDDGELSIFARQVILLSPCLHQIPSEHYGLKD--QEQRFRQRYLDLIMND 245

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194
             +N+ V R++I++ +R      +F+E  TP++ A +    A+ F+   + +N   F  +
Sbjct: 246 SSRNVFVTRSKIVSYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHHNELNMNLFMRI 305

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  E
Sbjct: 306 --APELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDLMNVTE 362

Query: 255 NVLRGVFEEFSNG 267
           +++ G+ +  + G
Sbjct: 363 DLVSGLVKHVTGG 375



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576


>gi|13507991|ref|NP_109940.1| asparaginyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501035|sp|P75521|SYN_MYCPN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|1674281|gb|AAB96228.1| asparaginyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 455

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 114/268 (42%), Gaps = 21/268 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH---YGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           ++L+GW+   R    IIFL++ D      +  VV       F +A+S+     + + G V
Sbjct: 21  IKLTGWLKNKRTSANIIFLEVNDGSTLLNLQAVVKQDQPELFALAESISLASAVSVSGTV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRRD 136
               A T  +      +EL  ++I +LS A  + PL    ++E+         +L +R  
Sbjct: 81  ----ALTPKSK---QPLELVVKQINVLSTARADYPLQ---KKEHSLEFFRNNAYLRVRAR 130

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY---- 192
           T    +  R+ +  ++       +F+   +PILT++  EGA +      + QG  +    
Sbjct: 131 TYFAIMKVRSLLSQAIFDYFFKNDFVLVHSPILTSNDCEGAGETF---ELKQGKEFFNKT 187

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                  Q+     A  F + F   P FR E   + R   EF+ ++ E++F    D++  
Sbjct: 188 TYLTVSGQFGAECYAQAFKKVFTFGPTFRAEKSHTSRHLSEFWMIEPEVAFANLKDLIKL 247

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYD 280
           +E+ ++ V ++         +FL   +D
Sbjct: 248 IESTVKTVIKQVMQKAKQELDFLEKQFD 275


>gi|320450617|ref|YP_004202713.1| asparaginyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320150786|gb|ADW22164.1| asparaginyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 438

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 16/244 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74
           G  V L GW+++ R  G I FL +RD  G  Q            FE A  +  E  L + 
Sbjct: 13  GQEVELRGWLYQRRSKGKIHFLILRDGTGFLQATLFKGEVPEEVFEQADHLPQETALKVH 72

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDL 133
           GLV  R  E        G  ELS + +E++S+ + E P+   G +E+       +R L L
Sbjct: 73  GLV--RRDER-----APGGFELSVRNLEVVSLPQGEYPI---GPKEHGIDFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +  ++        F+    PILT S+ EG  D L    +  G    
Sbjct: 123 RHRRPFAVMRIRDELERAIHDFFAERGFLRFDAPILTPSAVEGTTD-LFEVDLFDGEKAY 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + +   P FR E  ++ R   EF+ ++ E++F+  ++ +   
Sbjct: 182 LSQSGQLYAE-AGALAFGKVYTFGPTFRAERSKTRRHLLEFWMIEPEVAFMTHEENMALQ 240

Query: 254 ENVL 257
           E ++
Sbjct: 241 EELV 244



 Score = 37.0 bits (84), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 15/86 (17%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPHG 537
           L   G+ EI  G  R H  E++ +     G+ +EV +      RFG +         PH 
Sbjct: 354 LAPEGYGEIIGGSQRIHDLELLRRKIQEFGLPEEVYDWYLDLRRFGSV---------PHS 404

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G++R V  + G  +VRE   FP
Sbjct: 405 GFGLGLERTVAWICGLAHVREAIPFP 430


>gi|229492238|ref|ZP_04386046.1| putative lysyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229320864|gb|EEN86677.1| putative lysyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 1118

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 19/225 (8%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      S  G+ VR++G + RVR +GG++F D+RD  G  QV+ + D+   E     
Sbjct: 663 THTIAAAAKSPEGTRVRIAGRLLRVRDYGGVVFTDVRDWSGDIQVLVDQDNVGREKLAEF 722

Query: 66  RSEW----VLCIDGLV-MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            +E+    ++ + G +  SR  E    ++I  +  ++ + +         PLP   +   
Sbjct: 723 AAEFDLGDLIEVSGTIGRSRKGEL---SLIAVEWRMNGKCLH--------PLPDKWKGLS 771

Query: 121 PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGAR 178
               R + R+LD+  +   + +++ R+ ++ S+R  +    ++E  TPIL        A 
Sbjct: 772 DPETRVRQRYLDIALNPKARELLEARSAVVKSLRDSLGGRGYLEVETPILQQVHGGANAA 831

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            FL          Y L  AP+ Y + L  +G ++ F+I   FR+E
Sbjct: 832 PFLTHINAYNLDLY-LRIAPELYLKRLCVAGMEKVFEIGRVFRNE 875



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           RN ++E  + A      + E+ E+      +A +
Sbjct: 1025 AEKWDLVAWGVELGTAYSELTDPVDQRNRLTEQSMLAAGGDPEAMELDED----FLQALE 1080

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  G+DRIVML+ G  ++RE   FP+++
Sbjct: 1081 HAMPPTGGLGMGVDRIVMLITGG-SIRETLAFPLAK 1115


>gi|303248492|ref|ZP_07334750.1| lysyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302490112|gb|EFL50032.1| lysyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 529

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 122/265 (46%), Gaps = 19/265 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G++ +    RL+G +  +R  G + F  ++D  G  QV A  D+   ++  + +   +  
Sbjct: 82  GLAALDRTFRLAGRIVALRSFGKVAFFTVQDASGRLQVFAERDTLGTDVYSTFKKFDIGD 141

Query: 73  IDGLV--MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYR 129
           I G+   + R+         TG++ L A  I++L+ +   LP    G ++     R++ R
Sbjct: 142 IVGVTGKLFRTK--------TGELTLHAATIKLLTKSMRPLPEKYHGLKDV--ETRYRQR 191

Query: 130 FLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186
           ++DL        I K RT+I+  +R  +    F+E  TP++ A  P GA  + F+     
Sbjct: 192 YVDLIVTPKAVEIFKARTKIVRELRAFLDTAGFMEVETPMMQAI-PGGATAKPFITHHNA 250

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
              S Y +  AP+ Y + L+  GF+R +++   FR+E   +   P EF   +   +F   
Sbjct: 251 LDMSLY-MRIAPELYLKRLLVGGFERVYEVGRNFRNEGISTRHNP-EFTMCEFYWAFARY 308

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS 271
           +D+++  E +   +    +  + V 
Sbjct: 309 NDLMDLTERLFGHIARAVTGSDAVE 333



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL    ++REV LFP+
Sbjct: 483 RALEYGMPPAAGEGIGIDRLVMLLTDQASIREVILFPL 520


>gi|268609181|ref|ZP_06142908.1| lysyl-tRNA synthetase, class II [Ruminococcus flavefaciens FD-1]
          Length = 539

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 129/290 (44%), Gaps = 41/290 (14%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCID 74
           + VR++G +   R  G   F+D+RD     QV    +    ++ K+ + +W    ++ I+
Sbjct: 88  NIVRIAGRIMSWRDMGKANFIDVRDASDRIQVYVRSNDVGADLFKTFKKKWDIGDIVGIE 147

Query: 75  GLVM--SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           G V    R   +I+A  IT   +      E     ++               R++ R+LD
Sbjct: 148 GYVFRTKRGEISIHAKGITLLSKSLLPLPEKWHGLKDT------------DTRYRQRYLD 195

Query: 133 LRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           L  +  +    VKR++II S+R  +  + F+E  TP+L +++   A      +R  +  +
Sbjct: 196 LIINPDVKDTFVKRSKIIASIRRYLDNQGFMEVETPMLVSNAGGAA------ARPFETHY 249

Query: 192 YALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            AL +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 250 NALDEEVKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTD 308

Query: 246 QDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286
              +++  EN+ R V +E     TV            F R+   DA+++Y
Sbjct: 309 YYGMMDLTENMFRHVAQEVCGTTTVPYGEHMIDLGKPFERLTMIDAVKKY 358



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 30/42 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           RA + GMPP GGI  GIDR+VMLL  + ++R+V LFP  ++ 
Sbjct: 484 RALEIGMPPTGGIGYGIDRLVMLLTNSPSIRDVLLFPTMKSL 525


>gi|305680501|ref|ZP_07403309.1| lysine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305660032|gb|EFM49531.1| lysine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 541

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 121/255 (47%), Gaps = 14/255 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G V  +R  G + F  I++  G TQ+ A    A  E+   + + W   +D G ++S
Sbjct: 94  VAIAGRVLFIRNTGKLCFATIQEGSG-TQIQAMLSLA--EVGPDLLAAWKSDVDLGDIVS 150

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-RRDT 137
                I    ++ + ELS         A+ L PLPV    +  E +R ++R+ DL  R+ 
Sbjct: 151 VRGRVI----VSKRGELSVLASSWHMAAKALRPLPV-AFADMSEDMRVRHRYTDLIMREK 205

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
             +N + R +++ ++R  + ++ F+E  TP+L T      AR F+  S       Y L  
Sbjct: 206 ARENALTRIKVMRALRNYLESQGFLEVETPMLQTLHGGAAARPFVTHSNALDIDLY-LRI 264

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y +  +  G +R F++   FR+E   S   P EF  L+   ++   DD    ++N+
Sbjct: 265 APELYLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFAMLETYQAWGTYDDCAELIKNL 323

Query: 257 LRGVFEEFSNGNTVS 271
           ++ V  E     TV+
Sbjct: 324 IQDVAMEVFGSTTVT 338



 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 15/93 (16%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQ-------AFSNVGISKE--VVENRFGGLYRAFQC 531
           ++DL   GFE+A+G   + + + ++Q       A    G  +E  V++  F     A + 
Sbjct: 448 KWDLYVRGFELATG--YSELVDPVIQRERFEDQARLAAGGDEEAMVLDEDF---LAAMEQ 502

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP  G   GIDR++M L G   +RE  LFP+
Sbjct: 503 GMPPTAGAGMGIDRLLMALTGL-GIRETVLFPL 534


>gi|116203221|ref|XP_001227422.1| hypothetical protein CHGG_09495 [Chaetomium globosum CBS 148.51]
 gi|88178013|gb|EAQ85481.1| hypothetical protein CHGG_09495 [Chaetomium globosum CBS 148.51]
          Length = 916

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 114/268 (42%), Gaps = 23/268 (8%)

Query: 15  SDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQ-VVANPDSACFE----IAKSVRSE 68
           S+ G  V     +H VR     + F+  RD   + Q V+A  +    E     A+ + SE
Sbjct: 112 SNAGKAVSFIARIHHVRCMSSKLAFVIFRDQIELIQGVLAYREGEISENFVRWAEHLVSE 171

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES----- 123
             + + G++     E    +I   ++ +      ++ V E LP+ VF      E      
Sbjct: 172 GFVHVQGILQRPPEEIKGCSIRELEVRIDTMH-SVVPVQEHLPMDVFSMDRVEEDEETGQ 230

Query: 124 --------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                   +R   R   LR  T          + ++ R  + A+NFIE  TP L   + E
Sbjct: 231 LEGMASTRVRVSNRIAYLRTPTAQSIFRVNAVVCSTFRSILEADNFIEIHTPKLMPGATE 290

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
              +        + +F A  Q+PQ  KQ+ +++ F R F+I P FR ED  + R   E+ 
Sbjct: 291 SGAEVFRVGYFGRTAFLA--QSPQLCKQMSISADFGRVFEIGPVFRAEDSNTHRHLTEYT 348

Query: 236 QLDMEMSF-VEQDDILNTMENVLRGVFE 262
            +D+EM+   +  + +  ++ +++ +FE
Sbjct: 349 GMDLEMAINSDYREAMRVIDKLMKSIFE 376



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI +GG R H  +++ +     GI    VE    G    F+ G+ PH G   
Sbjct: 483 FDIFLRGQEITTGGQRIHKPDLLKERMKKAGIEPSGVEEYMQG----FEFGVLPHAGCGI 538

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++ LLL   ++R  SLFP
Sbjct: 539 GLERLLFLLLNLGDIRHASLFP 560


>gi|330447414|ref|ZP_08311063.1| lysyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491605|dbj|GAA05560.1| lysyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 502

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 133/271 (49%), Gaps = 27/271 (9%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWV-LCIDGLVMSRSAETINANIITGQIEL 96
           FL I+D  G  Q  A+ D     + K ++ ++  L I  ++  + A   +     G + +
Sbjct: 76  FLAIQDVSGRIQAYASKD-----VQKELKEKYSGLDIGDIIGIKGALHKSGK---GDLYV 127

Query: 97  SAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRC 154
           +  + E+L+ A   PLP        + +R++ R++DL    D+ H  +V R+++++++R 
Sbjct: 128 NMDEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNDDSRHAFVV-RSKVVSAIRN 185

Query: 155 RMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
            M+++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  GF+R
Sbjct: 186 FMVSKGFMEVETPMMHVI-PGGATARPFITHHNALDIDMY-LRVAPELYLKRLVVGGFER 243

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV-- 270
            F+I   FR+E   S R   EF  ++  M++ + +D+++  E +L  +  +    + +  
Sbjct: 244 VFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSSIAMDVLGSSKMPY 302

Query: 271 -------SNNFLRICYDDAIRRYGTDKPDLR 294
                  +  + R+   DAI++Y  D  +++
Sbjct: 303 GEYEVEFAGPYARMSMLDAIKKYNPDHAEIQ 333



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 494


>gi|116515196|ref|YP_802825.1| hypothetical protein BCc_270 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285408|sp|Q057G7|SYK_BUCCC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116257050|gb|ABJ90732.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)]
          Length = 502

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 16/241 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
            ++SG +   R  G  +F  IR++    Q+    +       K+   + +L +D G ++ 
Sbjct: 67  TKISGRIVNKRTFGKALFFVIRNNNHDIQIYIKSNY----FPKNYYQKNILELDLGDIIG 122

Query: 80  RSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
              +    N  T ++ +  +KI +L+ +   LP   FG +   + I+++ R+LDL   + 
Sbjct: 123 VKGKIFKTN--TCELSILCKKIYLLTKSLRSLPDKYFGLKN--QEIKYRKRYLDLISNNK 178

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALP 195
           + K   KR+ II+++R  M  + F+E  TP+L    P GA  + F+          Y L 
Sbjct: 179 IIKIFQKRSLIISNIRSFMKQKKFLEVETPML-HPIPGGANAKPFITYHNSLNEKMY-LR 236

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF++ F+I   FR+E   +   P EF  +++ MS+    DI+N +E 
Sbjct: 237 IAPELYLKKLIIGGFNKIFEINRNFRNEGISTKHNP-EFTMMEIYMSYSNYIDIMNLLEE 295

Query: 256 V 256
           +
Sbjct: 296 L 296



 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 7/92 (7%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCG 532
           A +++    G+EIA+G    +  E   + F  + ISK+   ++            A + G
Sbjct: 408 AERFEFFIAGYEIANGFSELNDPEEQKKRFK-LQISKKNYTDKSKNFSYDKDYIIALEHG 466

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +PP  G+  GIDR++M+L   K ++++  FP+
Sbjct: 467 LPPTSGLGVGIDRLIMILTNQKTIKDIIFFPL 498


>gi|257882590|ref|ZP_05662243.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257886012|ref|ZP_05665665.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257891705|ref|ZP_05671358.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894180|ref|ZP_05673833.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260559536|ref|ZP_05831717.1| lysyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206687|ref|ZP_05921385.1| lysyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289565049|ref|ZP_06445503.1| lysyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293553702|ref|ZP_06674326.1| lysyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|293563203|ref|ZP_06677659.1| lysyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|293570125|ref|ZP_06681205.1| lysyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294614890|ref|ZP_06694781.1| lysyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294623714|ref|ZP_06702547.1| lysyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314938205|ref|ZP_07845505.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314943100|ref|ZP_07849899.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314949297|ref|ZP_07852640.1| lysyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314952230|ref|ZP_07855245.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314992088|ref|ZP_07857538.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314996271|ref|ZP_07861327.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|257818248|gb|EEV45576.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257821868|gb|EEV48998.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257828065|gb|EEV54691.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830559|gb|EEV57166.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260074635|gb|EEW62956.1| lysyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260079180|gb|EEW66873.1| lysyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289163256|gb|EFD11102.1| lysyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291587497|gb|EFF19381.1| lysyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291592176|gb|EFF23794.1| lysyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291596929|gb|EFF28147.1| lysyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291602277|gb|EFF32505.1| lysyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291604853|gb|EFF34331.1| lysyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313589515|gb|EFR68360.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313593302|gb|EFR72147.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313595625|gb|EFR74470.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313598159|gb|EFR77004.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313642401|gb|EFS06981.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313644303|gb|EFS08883.1| lysyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 498

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 133/305 (43%), Gaps = 38/305 (12%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L           ++++G    ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSEELHELFDPRTKEELAEMGLTASVAGRMMTRRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSA---CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
           D      +E+ K         + G +M            TG++ + A +I ILS A   P
Sbjct: 100 DQVGDEAYEVFKHADLGDFFGVTGQIMKTD---------TGEVSIKASEITILSKALR-P 149

Query: 112 LPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           LP           R++ R+LDL   R++  +  +KR++II+ +R  +    +IE  TP+L
Sbjct: 150 LPDKYHGLTNIEQRYRQRYLDLISNRESFDR-FMKRSQIISEIRRYLDGNGYIEVETPVL 208

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + L+  G ++ ++I   FR+E   + 
Sbjct: 209 HNEAGGAAARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTT 267

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF-------SNGNTV--SNNFLRICY 279
             P EF  L+   ++ + +D++N  E ++R   E+         +G  V   ++F RI  
Sbjct: 268 HNP-EFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAVDLESDFKRIHM 326

Query: 280 DDAIR 284
            DAI+
Sbjct: 327 VDAIK 331



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP
Sbjct: 460 ALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495


>gi|225873796|ref|YP_002755255.1| asparagine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225794514|gb|ACO34604.1| asparagine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 452

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 118/285 (41%), Gaps = 32/285 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA----CFEIAKSVRSEWVLCI 73
           G  + L GW++ +R  G ++F   RD  G  Q +  P +A     FE  K +  E  + +
Sbjct: 27  GKTITLRGWLYNLRESGKLLFPIFRDGSGTIQGIV-PKAAVAPEVFERIKGLTQESSVIV 85

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132
            G V +        +   G  EL  + +E++  V E+ P P+   +E+      ++R L 
Sbjct: 86  TGKVRAD-------HRAPGGYELDVENVEVVQRVPEDTPFPI-SLKEHGTDFLMEHRHLW 137

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R       +  R  II + R  +    FI    PILT ++ EG    L P        Y
Sbjct: 138 IRTPRQSAILRIRAEIIKAARDFLDDNGFILTDPPILTPAACEGTST-LFPVEYFGDEAY 196

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E ++   DD++  
Sbjct: 197 -LTQSGQLYIE-STALALGKVYSFGPTFRAEKSKTRRHLTEFWMVEPEWAYAGLDDLMGL 254

Query: 253 MENV---------------LRGVFEEFSNGNTVSNNFLRICYDDA 282
            E                 L+ +  + +   ++   F R+ YD+A
Sbjct: 255 AEQFISFIVGRVLTRRAADLKVLGRDVAKLQSIQAPFPRLSYDEA 299


>gi|67624611|ref|XP_668588.1| aspartate--tRNA ligase [Cryptosporidium hominis TU502]
 gi|54659788|gb|EAL38351.1| aspartate--tRNA ligase [Cryptosporidium hominis]
          Length = 435

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 47/282 (16%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L  +  G  + L G +   R  G + F+ +R  +   Q+VA+ ++     +     +W+
Sbjct: 78  ELNSNQKGEKIWLRGRITESRCKGSLGFVLLRQTFYRLQLVADANNG----SSKEMIKWL 133

Query: 71  LCID--------GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFG----E 117
            C+         G ++      +++   T  IE+S +++  +S A  ELP  +      E
Sbjct: 134 GCLPIESMIDVYGTIVVPETPVVSS---TQDIEVSVERVYCVSSACSELPFQLKDANRVE 190

Query: 118 REYPES--------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-----NFIEC 164
            E  +S        +R   R LDLR   L + I +    I S  CR++ E      FIE 
Sbjct: 191 TEDEDSTIIKVLQDVRLDNRVLDLR-TYLSQAIFR----IQSEVCRLLREFLTEREFIEI 245

Query: 165 STP-ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP +L  +S  GA  F V    N      L Q+PQ +KQ+ +    +R F+I P FR E
Sbjct: 246 HTPKLLPGASESGATVFKVDYFSNTA---CLAQSPQLHKQMSICGDLERVFEIGPVFRAE 302

Query: 224 DPRSDRLPGEFYQLDMEM----SFVEQDDILNTM-ENVLRGV 260
           +  + R   EF  +D+EM    ++ E  D+ + M  ++ RG+
Sbjct: 303 NSNTHRHLCEFVGVDIEMNIENTYHELVDVFDAMFRHIFRGI 344


>gi|301156452|emb|CBW15923.1| lysine tRNA synthetase, inducible [Haemophilus parainfluenzae T3T1]
          Length = 502

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 123/286 (43%), Gaps = 29/286 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V ++G +   R  G   F+ ++D  G  Q+    D+    + +     W    ++ + G 
Sbjct: 64  VAVAGRIMTRRAMGKATFITLQDMSGKIQLYVARDNLPEGVYEEDVGSWDLGDIIGVKGT 123

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           +             T ++ +   ++++L+ A   PLP           R++ R+LDL   
Sbjct: 124 LFKTK---------TNELTIKTTEVQLLTKALR-PLPNKFHGLTDMEARYRQRYLDLISN 173

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           +   +  + R+++I  +R   I++ F+E  TP+L    P GA  R F+          Y 
Sbjct: 174 EESRRTFIIRSKVIAGIREFFISKGFMEVETPMLQVI-PGGASARPFITHHNALDVDMY- 231

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+++  
Sbjct: 232 LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNT 290

Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
           E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 291 EELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATIKYGADK 336



 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536
           +++L   G EI +G    + +E   + F     +KE  ++    +      A + G+PP 
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDDDFVVALEHGLPPT 470

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+ ML   A ++R+V LFP
Sbjct: 471 AGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|257452680|ref|ZP_05617979.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|257466541|ref|ZP_05630852.1| lysyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917696|ref|ZP_07913936.1| lysyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059220|ref|ZP_07923705.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684896|gb|EFS21731.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313691571|gb|EFS28406.1| lysyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 493

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 118/262 (45%), Gaps = 23/262 (8%)

Query: 5   RTHSCGDL--GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACF 59
           + H  GD+     +     + +G +   R  G I F  I D  G  Q+    D      F
Sbjct: 38  KKHMVGDILKHTPEEELIFKTAGRIMSFRRKGKIAFAHIEDQTGKIQIYVKQDELGEEAF 97

Query: 60  EIAKSVRSEWVLCIDG-LVMSRSAE-TINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           ++ K +    ++ I+G L ++ + E T+ AN++T    L  + I  L      P    G 
Sbjct: 98  QLVKMLNVGDMVGIEGTLFITHTGELTLRANVVT----LLTKNIRAL------PEKFHGL 147

Query: 118 REYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
            +     R++ R++DL  +  + +  +KRT II  ++  +    F+E  TP++       
Sbjct: 148 TDV--ETRYRKRYVDLIMNREVKETFLKRTMIIKELKKYLDDRGFLEVETPMMHPIVGGA 205

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+          Y +  AP+ Y + L+  GFD+ + +  CFR+E   +   P EF 
Sbjct: 206 AARPFITHHNTLDVDLY-MRIAPELYLKKLIVGGFDKVYDLNKCFRNEGMSTRHNP-EFT 263

Query: 236 QLDMEMSFVEQDDILNTMENVL 257
            +++  ++ + +D+++  E V+
Sbjct: 264 TVELYQAYADFNDMMDLTEGVI 285



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL GA ++R+V LFP
Sbjct: 452 ALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVILFP 487


>gi|253687050|ref|YP_003016240.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511528|sp|C6D8Z6|SYK_PECCP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|251753628|gb|ACT11704.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 505

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 117/251 (46%), Gaps = 12/251 (4%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L   G ++    
Sbjct: 70  VAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL---GDILGARG 126

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
           +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +N 
Sbjct: 127 KLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESRNT 183

Query: 143 VK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQ 199
            + R++++ ++R  M+   F+E  TP++    P GA  R F+          Y L  AP+
Sbjct: 184 FRIRSKVMAAIRSFMVDHGFMEVETPMMQVI-PGGASARPFITHHNALDIDMY-LRIAPE 241

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   EN+ R 
Sbjct: 242 LYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTENLFRT 300

Query: 260 VFEEFSNGNTV 270
           + ++     TV
Sbjct: 301 LTQDVLGSTTV 311



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|313639775|gb|EFS04521.1| lysyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 498

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/356 (22%), Positives = 152/356 (42%), Gaps = 45/356 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F  I+D +   Q+    D+    I +   + + +   G ++  
Sbjct: 63  VTVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKIADLGDIIGI 118

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                  N  TG++ + A +  +LS +   LP    G ++  +  R++ R+LDL  +   
Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           +N  V R++I+   R  M  + F+E  TP+L T +    A+ F+          Y L  A
Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++ +E ++
Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292

Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD-------------KPDL 293
             V E+  NG T          ++  + RI   DA++ Y G D               + 
Sbjct: 293 STVCEQV-NGTTKITXXEYDVDLTPKWRRIHMADAVKEYVGVDFWNVTSDEEAHQLAKEH 351

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343
             P+  H    H ++  F  F +   + P + V+  P      AK    +  F DR
Sbjct: 352 NVPVTKHMTYGHILNEFFETFVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG+  GIDR+VMLL  A ++R++ LFP  ++
Sbjct: 457 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 496


>gi|291390509|ref|XP_002711779.1| PREDICTED: lysyl-tRNA synthetase isoform 2 [Oryctolagus cuniculus]
          Length = 624

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFE-----IAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN  +   E     I   +R   ++ + 
Sbjct: 153 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFTRINNKLRRGDIIGVQ 212

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 213 G---------NPGKTKKGELSIIPHEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 261

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 262 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 320

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 321 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 378

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  + G TV+
Sbjct: 379 EITEKMISGMVKHVTGGYTVT 399



 Score = 43.5 bits (101), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 8/62 (12%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM--------SQNFCDLLMGSPSTV 579
           A + G+PP  G   GIDR+ M L  + N++EV LFP         S    D L  SP   
Sbjct: 563 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDKKESVAATDTLESSPVGT 622

Query: 580 SV 581
           SV
Sbjct: 623 SV 624


>gi|256080760|ref|XP_002576645.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238661922|emb|CAZ32882.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 375

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 106/244 (43%), Gaps = 19/244 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVVANPDSACFEI---AKSVRSEWV 70
           S++   V + G +HR R  G + F  +R   Y I  V++  +    E+     S+  E +
Sbjct: 81  SNINQNVWVRGRLHRSRMKGKLCFFILRLQDYRIQNVLSVGEQTPKEMLAFVSSISKESI 140

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE----------RE 119
           + + G V+         N  T  IE+  +K+ ++S A   LPL +               
Sbjct: 141 IDVFGRVLKSPVLIEGCNPDT--IEIHCEKVFVVSAALPTLPLQIEDAMRPDDDETTLSR 198

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R   R +DLR             ++      +    F+   TP + +++ EG  +
Sbjct: 199 VNQDTRLDNRCIDLRTPVNQAIYRIEAGVVKFFMEYLTNAGFVNIHTPKMISAASEGGAN 258

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S  + GS Y L Q+PQ YKQ+ +A+ F+R F I   FR ED  + R   EF  LD+
Sbjct: 259 VFRVSYFS-GSAY-LAQSPQLYKQMAIAADFERVFTIGSVFRAEDSNTHRHLTEFVGLDI 316

Query: 240 EMSF 243
           EM+F
Sbjct: 317 EMAF 320


>gi|33322808|gb|AAQ07139.1|AF496450_1 aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp. lactis]
          Length = 140

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/141 (29%), Positives = 76/141 (53%), Gaps = 8/141 (5%)

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF Q+D+E SF++++ +    E +L  V ++   G  +     RI + +++ +YG DKPD
Sbjct: 1   EFTQIDLETSFMDEEGVQEVTEGLLAKVMKDV-KGIDLQLPLPRITWQESMDKYGCDKPD 59

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARS 350
            R  +++H++   F  S F+VF+  L  N G+ V  I  KGG    +R   + M ++ + 
Sbjct: 60  TRYEMLIHDLGNVFAKSGFKVFASALE-NGGF-VRGIAVKGGAKFYSRKKIEAMQDYIKR 117

Query: 351 QGQPGLAYIFWRLDESGNVAG 371
               GLA++ +   E G+ +G
Sbjct: 118 YXAKGLAWVKY---EDGDFSG 135


>gi|253701972|ref|YP_003023161.1| asparaginyl-tRNA synthetase [Geobacter sp. M21]
 gi|251776822|gb|ACT19403.1| asparaginyl-tRNA synthetase [Geobacter sp. M21]
          Length = 461

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 110/273 (40%), Gaps = 29/273 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L     G  + L GW   VR   G+ F+ + D   +   QVVA P+ A +   
Sbjct: 4   RTRVKQALSEGRPGETLLLKGWARTVRTGKGVTFISLNDGSTLAGIQVVAEPELANYAEV 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYP 121
            ++ +   + + G++    A         GQ +EL A  +E++  A++   P+  +R   
Sbjct: 64  AALGTGSAITVTGVLQESPA--------AGQELELKALSVEVVGAADQ-EYPMQKKRHSF 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R     + +R +T       R+ +   +        F+   TPI+TA+  EGA +  
Sbjct: 115 EYLR-TIAHMRVRSNTFGAVFRVRSALAQEVHRFFAERGFLYVHTPIITANDCEGAGELF 173

Query: 182 V--------PSRVN-----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDP 225
                    P RV         F+A         QL   L A  F   +   P FR E+ 
Sbjct: 174 RVTTLDLNNPPRVEGEIDFAQDFFAKATGLTVSGQLEGELFAQAFSDIYTFGPTFRAENS 233

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            + R   EF+ ++ EM+F +  D  +  E  L+
Sbjct: 234 NTARHAAEFWMIEPEMAFADLSDDADLAEAFLK 266



 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    E ++     VGI  E +           + G  PH G   G 
Sbjct: 378 LVPKVGEIIGGSQREERLEPLIGRMKEVGIDPESL----SWYLDTRRWGSTPHAGFGLGF 433

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R++M L G +N+R+V  FP +    + 
Sbjct: 434 ERLIMYLTGMENIRDVIPFPRTPRHAEF 461


>gi|170725302|ref|YP_001759328.1| lysyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|238688658|sp|B1KFR7|SYK_SHEWM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|169810649|gb|ACA85233.1| lysyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 501

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 24/226 (10%)

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--------RFKYRFLDLRRDTLHKN 141
           +TGQ+ LS  K ++    EE  L     R  PE          R++ R++DL  +   +N
Sbjct: 114 VTGQLHLSG-KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEDSRN 172

Query: 142 -IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
             + R+++++++R  M+ + F+E  TP++  S P GA  R F         + Y L  AP
Sbjct: 173 AFIMRSKVVSAIRNFMVKKEFMEVETPMM-HSIPGGASARPFETHHNALDIAMY-LRIAP 230

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++  M++ + +D+++  E +L 
Sbjct: 231 ELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADFNDLMDLTEEMLS 289

Query: 259 GVFEEFSNG-------NTVS--NNFLRICYDDAIRRYGTDKPDLRN 295
            +  E           +TV     + R+   DAI++Y  D   +++
Sbjct: 290 SIATELCGSPQLPYGEHTVDFGGPYARLSMLDAIKKYNPDNATIQS 335



 Score = 41.2 bits (95), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 460 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 495


>gi|254524293|ref|ZP_05136348.1| lysyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219721884|gb|EED40409.1| lysyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 489

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 125/279 (44%), Gaps = 20/279 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCI 73
           G  V+++G +   R  G   F  I+D  G  Q+           A +    W    ++ +
Sbjct: 51  GRQVKMAGRLMAKRIMGKASFAQIQDESGRIQLFLQ--GTVLGDAYTAFKGWDVGDIIAV 108

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           +G  ++R+         TG++ + A+ I +L+ +   PLP           R++ R++DL
Sbjct: 109 EG-GLTRTK--------TGELSVKAESIRLLTKSLR-PLPDKWHGLADVEQRYRQRYVDL 158

Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
                 + + +KR++II +MR  +   +F+E  TP++        A+ F           
Sbjct: 159 IVTPESRAVFIKRSKIIRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDL 218

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L   G +R ++I   FR+E   +   P EF  +++  ++   ++I++
Sbjct: 219 Y-LRVAPELYLKRLTVGGLERVYEINRNFRNEGVSTRHNP-EFTMMELYEAYATYNEIMD 276

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
             E V+R V +  + G  V  +  +I    A RR+  D+
Sbjct: 277 LTEGVIRDVAQAVNGGTEVEWDGAKIDLGPAFRRWRMDE 315



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L  NG E+A+G    +  E   Q F     +KE  ++    +   Y RA + GM P 
Sbjct: 397 RFELFVNGKELANGFSELNDPEDQAQRFQAQVAAKEGGDDEAMHYDADYIRALEYGMAPT 456

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG+  G+DR+VMLL G+ ++R+V LFP
Sbjct: 457 GGLGIGVDRLVMLLTGSSSIRDVLLFP 483


>gi|28897287|ref|NP_796892.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839370|ref|ZP_01992037.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|260363583|ref|ZP_05776403.1| lysine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260876252|ref|ZP_05888607.1| lysine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260896430|ref|ZP_05904926.1| lysine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|31340436|sp|Q87SB1|SYK_VIBPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|28805496|dbj|BAC58776.1| lysyl-tRNA synthetase, heat inducible [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149747118|gb|EDM58106.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|308088407|gb|EFO38102.1| lysine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308092867|gb|EFO42562.1| lysine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308113326|gb|EFO50866.1| lysine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328472051|gb|EGF42928.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 505

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 141/298 (47%), Gaps = 34/298 (11%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWV-LCIDGLVMSRSAETINANIITGQIEL 96
           FL I++  G  Q  A+      E+ K ++ ++  L I  ++  + A   +     G + +
Sbjct: 81  FLVIQETSGRIQAYADK-----EVQKELKEKYQGLDIGDIIGVKGALHKSGK---GDLYV 132

Query: 97  SAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCR 155
           + ++ E+L+ A   PLP        + +R++ R++DL  +   +N  V R+++++++R  
Sbjct: 133 NMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFVVRSKVMSAIRNF 191

Query: 156 MIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
           MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  GFDR 
Sbjct: 192 MISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVGGFDRV 249

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV--- 270
           F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V  E     ++   
Sbjct: 250 FEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDFTEELLSSVALEVLGSTSMPYG 308

Query: 271 ------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEFRVF 314
                    + R+   +AI+ Y  D        + DL+N  +M ++ +  VH E   F
Sbjct: 309 EDTVEFGGKYARMSMFEAIKHYNPDHAQIQALTEEDLQNRELMVSIAKS-VHVEVEPF 365



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 464 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 499


>gi|260902719|ref|ZP_05911114.1| lysine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308107650|gb|EFO45190.1| lysine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 505

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 141/298 (47%), Gaps = 34/298 (11%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWV-LCIDGLVMSRSAETINANIITGQIEL 96
           FL I++  G  Q  A+      E+ K ++ ++  L I  ++  + A   +     G + +
Sbjct: 81  FLVIQETSGRIQAYADK-----EVQKELKEKYQGLDIGDIIGVKGALHKSGK---GDLYV 132

Query: 97  SAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCR 155
           + ++ E+L+ A   PLP        + +R++ R++DL  +   +N  V R+++++++R  
Sbjct: 133 NMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFVVRSKVMSAIRNF 191

Query: 156 MIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
           MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  GFDR 
Sbjct: 192 MISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVGGFDRV 249

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV--- 270
           F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V  E     ++   
Sbjct: 250 FEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDFTEELLSSVALEVLGSTSMPYG 308

Query: 271 ------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEFRVF 314
                    + R+   +AI+ Y  D        + DL+N  +M ++ +  VH E   F
Sbjct: 309 EDTVEFGGKYARMSMFEAIKHYNPDHAKIQALTEEDLQNRELMVSIAKS-VHVEVEPF 365



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 464 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 499


>gi|227112637|ref|ZP_03826293.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 505

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 117/252 (46%), Gaps = 12/252 (4%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L   G ++    
Sbjct: 70  VAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL---GDILGARG 126

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
           +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +N 
Sbjct: 127 KLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESRNT 183

Query: 143 VK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQ 199
            + R++++ ++R  M+   F+E  TP++    P GA  R F+          Y L  AP+
Sbjct: 184 FRIRSKVMAAIRSFMVDHGFMEVETPMMQVI-PGGASARPFITHHNALDIDMY-LRIAPE 241

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   EN+ R 
Sbjct: 242 LYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTENLFRT 300

Query: 260 VFEEFSNGNTVS 271
           + ++     TV 
Sbjct: 301 LTQDVLGSTTVQ 312



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|86151307|ref|ZP_01069522.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|86153627|ref|ZP_01071830.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|157414696|ref|YP_001481952.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|315123958|ref|YP_004065962.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|172047060|sp|A8FKI8|SYK_CAMJ8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|85841654|gb|EAQ58901.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85842588|gb|EAQ59800.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|157385660|gb|ABV51975.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747336|gb|ADN90606.1| Lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315017680|gb|ADT65773.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315932664|gb|EFV11594.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 501

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 17/281 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +  +R  G  IF +I D     Q+  N DS   E+   ++    L +  +V+ +  
Sbjct: 60  VAGRLKLLRIAGKSIFANIEDEDTNLQIYFNKDSVGEELYAILKKN--LEVGDIVLVKGF 117

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKN 141
             +     TG+  L A ++++ + A  +PLP           R++ R++D+  +  + K+
Sbjct: 118 PFVTK---TGEFSLHASEVKLATKAI-VPLPEKYHGLTDIEQRYRKRYVDMIMNAEVRKD 173

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
            + R+++++ +R     + F+E  TP++   +        V    + G    L  AP+ Y
Sbjct: 174 FLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPELY 233

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+  GF+  F+I  CFR+E       P EF  ++   ++    D+++  E +   + 
Sbjct: 234 LKRLVVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTEELFALLL 292

Query: 262 EEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293
           ++ + G T+         S  F RI Y DA+ +YG    DL
Sbjct: 293 DKLNLGKTIEFDGKMIDFSKPFERITYKDALCKYGGLDRDL 333



 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL   K++R+V LFP
Sbjct: 453 ALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFP 488


>gi|291231216|ref|XP_002735562.1| PREDICTED: asparaginyl-tRNA synthetase-like [Saccoglossus
           kowalevskii]
          Length = 562

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 10/249 (4%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-AKSVRSEWVLCIDGLVM 78
           V++ GWVHR+R  G  ++F+ +RD  G  Q V + D  C    A S+ +E  + + G + 
Sbjct: 142 VKVLGWVHRLRRQGKALMFIILRDGTGYLQCVCS-DLLCQSYEALSLSTESTVFVCGTI- 199

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               E  +     G  EL     E++S A    +      E    ++   R + +R + L
Sbjct: 200 ---KEVPDGKSAPGGHELIVDYWELVSAAPAGGIDNILNEESHVDVQLDNRHMMIRGENL 256

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
            K +  R+ +    R      ++ E   P L  +  EG       +   + S+  L Q+ 
Sbjct: 257 SKILKIRSVVTQCFRDHYFNNSYFEIFPPTLVQTQVEGGSTLFKLNYFGEESY--LTQSS 314

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           Q Y +  + S  D  F IA  +R E  R+ R   E+  ++ E SF+  DD+LN +E+++ 
Sbjct: 315 QLYLETALPSMGD-VFCIASSYRAEQSRTRRHLSEYTHVEAECSFICFDDLLNRIESLVC 373

Query: 259 GVFEEFSNG 267
            V E   N 
Sbjct: 374 DVVERALNS 382


>gi|254575085|pdb|3I7F|A Chain A, Aspartyl Trna Synthetase From Entamoeba Histolytica
 gi|254575086|pdb|3I7F|B Chain B, Aspartyl Trna Synthetase From Entamoeba Histolytica
          Length = 548

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/341 (22%), Positives = 135/341 (39%), Gaps = 84/341 (24%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSEWVLCIDGL 76
           V +   V  VR  G ++FL +R   Y    +V   ++   E  +    + +E +  I G+
Sbjct: 65  VTIRARVQAVRGKGNMVFLFLRKGIYTCQALVMKSETISKEFVQFCQKISAESICDITGI 124

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFKYRFLDLRR 135
           V  ++ E          +E+    I ++S+AE  PLP+   +  +P S+ FK +  D+ +
Sbjct: 125 V--KAVEKPIEKATQQDVEIHVTSIAVVSLAE-YPLPMQIEDLTFPSSV-FKKQEEDIAK 180

Query: 136 ----------DTLHKNIVKR-------------------------TRIINSM-------- 152
                     D   K++ KR                         TR+ N M        
Sbjct: 181 VDEKIAKFLKDNEGKDLTKRPLKDEYAKLLKEKASAQKYVKVSQDTRLDNRMLDLRTVTN 240

Query: 153 --------------RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                         R  + ++ F+E  TP L   S EG  +       ++ ++ A  Q+P
Sbjct: 241 IAIFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSSEGGSNIFEVKYFDRKAYLA--QSP 298

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257
           Q YKQ+ +   F + F++ P FR E+  + R   EF  LD+EM  VE   + ++ ME + 
Sbjct: 299 QLYKQMAIMGDFRKVFEVGPVFRAENSNTRRHLTEFEGLDIEMEIVENYHECIDVMEKLF 358

Query: 258 RGVFEEFSN---------------GNTVSNNFLRICYDDAI 283
             +F+E                   + +   FLR+ Y +AI
Sbjct: 359 TFIFDEIPKRFPDELKVIRKQYPFEDLIYRPFLRLTYKEAI 399



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++     G+    +++       +F+ G  PH G   
Sbjct: 463 YDVFVRGQEITSGAQRIHDPEFLMKRCIEKGVDPATLKDYI----ESFRFGSWPHAGCGI 518

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RI ML LG  N+R+V+LFP
Sbjct: 519 GLERITMLYLGIPNIRKVTLFP 540


>gi|225024787|ref|ZP_03713979.1| hypothetical protein EIKCOROL_01674 [Eikenella corrodens ATCC
           23834]
 gi|224942494|gb|EEG23703.1| hypothetical protein EIKCOROL_01674 [Eikenella corrodens ATCC
           23834]
          Length = 506

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 22/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  ++D  G  Q+  N      +I +  +  W L   G ++  
Sbjct: 67  VKVAGRMMLQRDMGKASFATLQDVSGQIQLYVNDQGVGEKIHEEFK-HWDL---GDILG- 121

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
            AE +      G++ +   +I +L+ A   LP  V G ++  +  R++ R+ DL  +   
Sbjct: 122 -AEGVLFKTNHGELTVRVSQIRLLAKALRPLPDKVHGLKD--QETRYRQRYADLIVNAES 178

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
           + I K R RII ++R  M  E ++E  TP++   +    AR F+          + +  A
Sbjct: 179 REIFKKRGRIIQTIRNFMTGEQYLEVETPMMHPIAGGAAARPFVTHHNALDIPLF-MRIA 237

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   +F +   +++  E V+
Sbjct: 238 PELYLKRLVVGGFERVFEINRNFRNEGVSARHNP-EFTMMEFYEAFSDYHRMMDMTEGVI 296

Query: 258 R-------GVFEEFSNGNTV--SNNFLRICYDDAIRRY 286
           R       G      NG  V     F R+   DAI++Y
Sbjct: 297 RACANAVCGSLHVPYNGKEVDLEKRFDRLTIVDAIKKY 334



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE----NRFGGLYRAFQCGMPPH 536
           +++L   G E+A+G    +  E     F +    KE  +    N      RA + G+PP 
Sbjct: 411 RFELFAVGRELANGYSELNDPEDQADRFRSQVAQKEAGDDEAMNYDADYIRAMEYGLPPT 470

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  A ++R+V LFP
Sbjct: 471 GGCGIGIDRLVMLLTNAPSIRDVILFP 497


>gi|156555455|ref|XP_001606085.1| PREDICTED: similar to aspartyl-tRNA synthetase [Nasonia
           vitripennis]
          Length = 527

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 115/271 (42%), Gaps = 23/271 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL     G  V + G +H  R  G   F+ +R   + I  + A  D    ++ K    V 
Sbjct: 75  DLNTELAGQVVWIRGRLHTSRGKGKQCFIVVRQQSHSIQGLAAVNDKISKQMVKFISGVT 134

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGER------- 118
            E ++ ++  V  +       +     +E+  ++  ++S +E +LPL +           
Sbjct: 135 KESIVDVEAKV--QKVPNPIESCTQKDVEIHIEQFFVVSASEPQLPLQIEDAARPVNDND 192

Query: 119 ------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                 +  +  R   R LDLR             +    R  +  + F+E  TP + ++
Sbjct: 193 TSNLNIKVNQDTRLDNRILDLRTPANQAIFRLEAGVCKLFRDILTNKGFVEIHTPKIISA 252

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + EG  +    S     ++ A  Q+PQ YKQ+ +A+ F++ F +   FR ED  + R   
Sbjct: 253 ASEGGANVFTVSYFKSSAYLA--QSPQLYKQMAIAADFEKVFTVGAVFRAEDSNTHRHLT 310

Query: 233 EFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262
           EF  LD+EM+F     ++++T+  +   +F+
Sbjct: 311 EFVGLDLEMAFKYHYHEVMDTIGQMFTELFK 341



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  + + +   + GI  E    +      AF+ G PPH G   
Sbjct: 442 YDMFMRGEEIISGAQRIHDPDFLTERAKHHGIDIE----KIKAYIDAFRYGCPPHAGGGI 497

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+VS+FP
Sbjct: 498 GMERVVMLYLGLDNIRKVSMFP 519


>gi|76664791|emb|CAJ17835.1| aspartyl-tRNA synthetase [Candidatus Phytoplasma solani]
          Length = 59

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/58 (48%), Positives = 41/58 (70%)

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGG+A G+DR+VMLL    N+++V  FP +Q+  DL++ SP TV  EQL  L +++
Sbjct: 2   PPHGGLALGLDRLVMLLTKTNNIKDVIAFPKTQSAKDLMLDSPGTVEKEQLTTLKIKV 59


>gi|227552660|ref|ZP_03982709.1| lysyl-tRNA synthetase [Enterococcus faecium TX1330]
 gi|257888628|ref|ZP_05668281.1| lysyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257897417|ref|ZP_05677070.1| lysyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293378825|ref|ZP_06624980.1| lysine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|227178189|gb|EEI59161.1| lysyl-tRNA synthetase [Enterococcus faecium TX1330]
 gi|257824682|gb|EEV51614.1| lysyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257833982|gb|EEV60403.1| lysyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|292642366|gb|EFF60521.1| lysine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 498

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 133/305 (43%), Gaps = 38/305 (12%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L           ++++G    ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSEELHELFDPRTKEELAEMGLTASVAGRMMTRRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSA---CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
           D      +E+ K         + G +M            TG++ + A +I ILS A   P
Sbjct: 100 DQVGDEAYEVFKHADLGDFFGVTGQIMKTD---------TGEVSIKASEITILSKALR-P 149

Query: 112 LPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           LP           R++ R+LDL   R++  +  +KR++II+ +R  +    +IE  TP+L
Sbjct: 150 LPDKYHGLTNIEQRYRQRYLDLISNRESFDR-FMKRSQIISEIRRYLDGNGYIEVETPVL 208

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + L+  G ++ ++I   FR+E   + 
Sbjct: 209 HNEAGGAAARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTT 267

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF-------SNGNTV--SNNFLRICY 279
             P EF  L+   ++ + +D++N  E ++R   E+         +G  V   ++F RI  
Sbjct: 268 HNP-EFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAVDLESDFKRIHM 326

Query: 280 DDAIR 284
            DAI+
Sbjct: 327 VDAIK 331



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP
Sbjct: 460 ALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495


>gi|50552310|ref|XP_503565.1| YALI0E05005p [Yarrowia lipolytica]
 gi|49649434|emb|CAG79146.1| YALI0E05005p [Yarrowia lipolytica]
          Length = 585

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 102/242 (42%), Gaps = 9/242 (3%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+L GWVHR+R   G+ FL +RD  G  Q V   D A     +++  E  + I G +
Sbjct: 160 GPRVKLFGWVHRLRTQKGVAFLVLRDGTGYLQCVLQGDLANAFQTQNLTLESSVAIYGTL 219

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YPESIRFKYRFLDLRR 135
                E        G  EL     EI+ +A      +  + +     S    YR+L +R 
Sbjct: 220 ----KEVPEGARAPGGHELVVDFYEIIGLAPSGDDAITNKVQEGADPSYLLDYRYLTVRG 275

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +TL   +  R   + S+R         E + P +  +  EG           + ++  L 
Sbjct: 276 ETLSAVMKVRASFLRSIRRVYDELGMTEITPPCMVQTQVEGGSTLFALDYYGEKAY--LT 333

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+ Q Y + ++ S  D Y  IA  FR E   + R   E+  ++ E+ F++ +  L  +E 
Sbjct: 334 QSSQLYLETVIPSVGDAYC-IAESFRAERSHTRRHLSEYTHIEAELGFLDFETFLEHIEE 392

Query: 256 VL 257
           VL
Sbjct: 393 VL 394


>gi|313158752|gb|EFR58139.1| lysine--tRNA ligase [Alistipes sp. HGB5]
          Length = 573

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 33/288 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLV 77
           VR++G +   R  G   F +++DH G  QV    D  C E   ++ +   + +L I   +
Sbjct: 55  VRIAGRIMTRRIMGSASFFELQDHTGRIQVYIRRDDICPEGDPTLYNTVFKKLLDIGDFI 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYR 129
                E    +  TG++ +  +K  +LS +   PLPV  E++         PE +R++ R
Sbjct: 115 ---GVEGFAFHTNTGELSVHCRKFTVLSKSIR-PLPVVKEKDGQTFDAFTDPE-VRYRQR 169

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL  +   + + VKR +II++MR    ++ ++E  TPIL        AR F+      
Sbjct: 170 YVDLAVNPQVREVFVKRAKIISTMREFFNSKGYVEVETPILQPIPGGAAARPFITHHNAL 229

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME------- 240
               Y L  A + Y + L+  GFD  ++    FR+E       P EF  +++        
Sbjct: 230 DIDQY-LRIASELYLKKLIVGGFDGVYEFGKNFRNEGMDRTHNP-EFTVMEIYVAYKDYL 287

Query: 241 --MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIR 284
             M F EQ  +L  +   + G  E   +G  +S    F R+   DAIR
Sbjct: 288 WMMEFTEQ--MLEKVAVAVNGTTEVTLDGKQISFKAPFRRLSMTDAIR 333


>gi|313889924|ref|ZP_07823564.1| asparagine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121690|gb|EFR44789.1| asparagine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 448

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  + +  WV      G + FL +RD     Q VA  P+          +  F+I K +
Sbjct: 15  VGQEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEQFGEEEGAKKFDIVKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  + + P+     +E+     
Sbjct: 75  SQETSVKVTGVVKEDQRSKFG-------YELDITDLEVIGESVDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II S         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAIMQIRNAIIYSTYEFFDQNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  D  L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLNHDQSLDLQEAYVKALIQGVIDRAPQALEILERDVEALKRYIAEPFKRVSYDDAI 295


>gi|213410321|ref|XP_002175930.1| asparaginyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212003977|gb|EEB09637.1| asparaginyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 453

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 129/307 (42%), Gaps = 47/307 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVV---ANPDSACFEIAKSVRSEWVL 71
           V   ++++GW+  +R    + F+ + D   Y   QVV      D   +  A SV+   + 
Sbjct: 13  VNEVLQINGWIRSIRKMKNVTFIMLNDGSCYKSLQVVLPKCQNDGLTYGSAISVKGA-LK 71

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
           C D     R       +    Q+EL A+ + +L        P+  ++   E        L
Sbjct: 72  CRD-----RVQNQDLGHKRGPQLELQAELVNLLGENNWKNYPI-QKKPMSEDYLRSIPHL 125

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------- 181
            LR  T+ + +  R  I+  +R  +   +FIE + P++T+S  EGA +            
Sbjct: 126 RLRTSTMAQTMRLRASILRELRRFLDERDFIETNPPLITSSDCEGAGETFQVIKKNIKRN 185

Query: 182 --------VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                   +PS +   +  A      Q     +A   +R + + P FR E+ ++ R   E
Sbjct: 186 GTTKQEDDLPSTIEFFNRPAHLTVSTQLHLEALALALNRVYTVTPAFRAEESKTSRHLAE 245

Query: 234 FYQLDMEMSFVEQ-DDILNTMENVLRGV----------FEEFSNG------NTVSNNFLR 276
           F+ L++E SF+++ D +L+  E +++ V          + E   G       ++ N + R
Sbjct: 246 FWMLELEQSFIDELDPLLHLAETLIKSVARQLLRTKHMYMESKEGYLTDRWQSLLNPWHR 305

Query: 277 ICYDDAI 283
           +CYDDAI
Sbjct: 306 LCYDDAI 312


>gi|326927622|ref|XP_003209990.1| PREDICTED: lysyl-tRNA synthetase-like [Meleagris gallopavo]
          Length = 596

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 118/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           VR++G +H  R  GG +IF D+R      QV+AN      +   F I   +R   ++ + 
Sbjct: 126 VRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRLYKSEEEYFRINNKLRRGDIIGVV 185

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   ++ +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 186 G---------NPGKTKKGELSIIPYEVTLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 234

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R +I+  +R  +    F+E  TP++    P GA  + F+         
Sbjct: 235 ILNDYVRQKFITRAKIVTYIRSFLDELGFLEIETPMMNII-PGGAMAKPFITYHNELDMK 293

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 294 LY-MRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 351

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E +L G+ +  +    ++
Sbjct: 352 EITEKLLSGMVKHITGSYKIT 372


>gi|253755835|ref|YP_003028975.1| asparaginyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251818299|emb|CAZ56109.1| asparaginyl-tRNA synthetase [Streptococcus suis BM407]
          Length = 448

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 117/295 (39%), Gaps = 42/295 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G + FL +RD     Q VA  P+          +  F++AK +
Sbjct: 15  VGQEVTIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKFGEEAGTEKFDVAKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  +++ P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKFG-------YELDVTDLEVIGESQDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR          R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             Q ++  L Q+ Q Y +   MA G  R F   P FR E  ++ R   EF+ +D E SF+
Sbjct: 185 FGQLAY--LSQSGQLYLEAGAMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFL 240

Query: 245 EQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
             ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 241 SHEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRYIAEPFKRVAYDDAI 295



 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ K   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDNYDALVSKMDELGMDKS--EYEFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|183599837|ref|ZP_02961330.1| hypothetical protein PROSTU_03354 [Providencia stuartii ATCC 25827]
 gi|188022109|gb|EDU60149.1| hypothetical protein PROSTU_03354 [Providencia stuartii ATCC 25827]
          Length = 506

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 13/260 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + D+   V ++G +   R  G   F  ++D  G  Q+  + D     +      +W L  
Sbjct: 61  LEDLNIEVAIAGRMMTRRIMGKASFATLQDVGGRIQIYVSRDDLAEGVYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++            TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGAKGRLFKTK--TGELTVHCHEVRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D      + R++I+  +R  M+ + F+E  TP++    P GA  R F+         
Sbjct: 175 IANDESRHTFMVRSKILAELRNFMVGKGFMEVETPMMQVI-PGGASARPFVTHHNALDID 233

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++
Sbjct: 234 MY-LRIAPELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMELYMAYADYRDLI 291

Query: 251 NTMENVLRGVFEEFSNGNTV 270
           +  E + R + +    GNTV
Sbjct: 292 DLTEELFRTLAQNVL-GNTV 310



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTDSHTIRDVILFP 499


>gi|145591555|ref|YP_001153557.1| asparaginyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145283323|gb|ABP50905.1| asparaginyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 431

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 34/281 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L GWVHR R     IF+ +RD  G+ Q+V   D   F+  + +  E  L + G ++  
Sbjct: 21  VTLRGWVHRKRVLKEKIFILLRDSTGVIQLVLPRDK--FKDLEDLNLESALVVTGALVKE 78

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPL---PVFGEREYPESIRFKYRFLDLRRDT 137
                      G +E+    ++ +   E  P+    V  + EY   +R     L +R   
Sbjct: 79  PRAP-------GGVEMHVASVDWVYRGEPYPINEDAVVADSEYLLDVRH----LWIRSRK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           +   +  R  +  ++        F E   P+   ++ EG          ++  +  L Q+
Sbjct: 128 MQAVLKIRHTVFGAIHEYFRKNGFYEVHPPMFITAAVEGGATLFKVQYFDKIVY--LTQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y + L+  G ++ + IAP FR E  R+ R   EF+  +ME+++   +D +   E V+
Sbjct: 186 SQFYLEALI-YGLEKVYTIAPSFRAEPSRTRRHLTEFWHAEMEIAWAGMEDAVLVGEGVI 244

Query: 258 RGVFEEFSNG---------------NTVSNNFLRICYDDAI 283
             V E+  +                      F R+ YD+A+
Sbjct: 245 SHVVEKVLDERQEELRLLGRRIEPLEKAKPPFYRVSYDEAV 285



 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L+  G+ E+  GG R + +E +++     G++ +     +       + G  PH G   G
Sbjct: 347 LLPEGYGEVIGGGERIYQAEELIEKIKRFGLNPQ----DYWWYIDLRRYGSVPHSGFGLG 402

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           +DR+ M ++GA ++R+V  FP
Sbjct: 403 VDRLTMWIVGADHIRDVVPFP 423


>gi|146320461|ref|YP_001200172.1| asparaginyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253751434|ref|YP_003024575.1| asparaginyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253753335|ref|YP_003026476.1| asparaginyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|166232740|sp|A4W083|SYN_STRS2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|145691267|gb|ABP91772.1| Aspartyl/asparaginyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251815723|emb|CAZ51324.1| asparaginyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251819581|emb|CAR45260.1| asparaginyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|319757852|gb|ADV69794.1| asparaginyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 448

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 117/295 (39%), Gaps = 42/295 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G + FL +RD     Q VA  P+          +  F++AK +
Sbjct: 15  VGQEVTIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKFGEEAGTEKFDVAKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  +++ P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKFG-------YELDVTDLEVIGESQDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR          R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             Q ++  L Q+ Q Y +   MA G  R F   P FR E  ++ R   EF+ +D E SF+
Sbjct: 185 FGQLAY--LSQSGQLYLEAGAMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFL 240

Query: 245 EQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
             ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 241 SHEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRYIAEPFKRVAYDDAI 295



 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ K   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDNYDALVAKMDELGMDKS--EYEFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|319399674|gb|EFV87928.1| lysyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 495

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 19/284 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKS 64
           S  +L   +  S V ++G +   R  G   F  I+D  G  Q+    D      F I K 
Sbjct: 48  SKEELHEKEDESHVSIAGRLMTKRGKGKAGFAHIQDLKGQIQIYVRKDQVGDDQFNIWKM 107

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123
                ++ ++G++   +         TG+I + A+   +LS +   LP    G ++  + 
Sbjct: 108 ADLGDIIGVEGVMFKTN---------TGEISVKAKSFTLLSKSLRPLPDKFHGLQDIEQ- 157

Query: 124 IRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
            R++ R+LDL   +   +  + R++II  MR  +  + F+E  TP++   +    AR F+
Sbjct: 158 -RYRQRYLDLITNEDSTQTFINRSKIIQEMRNYLNKQGFLEVETPMMHQIAGGAAARPFV 216

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                   + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  
Sbjct: 217 THHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYE 274

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           ++ +  DI++  EN++R + +E      V  N   I  + + +R
Sbjct: 275 AYADYHDIMDLTENMVRHIAQEVFGSAKVQYNGEEIDLESSWKR 318



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490


>gi|57168540|ref|ZP_00367673.1| lysyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|305432957|ref|ZP_07402115.1| lysine--tRNA ligase [Campylobacter coli JV20]
 gi|57020045|gb|EAL56722.1| lysyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|304444111|gb|EFM36766.1| lysine--tRNA ligase [Campylobacter coli JV20]
          Length = 502

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 129/295 (43%), Gaps = 22/295 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           + T +  D  +S V     +SG +  +R  G  IF +I D     Q+  + DS   E   
Sbjct: 46  FDTENKRDESISSV-----ISGRLKLLRIAGKSIFANIEDENENLQIYFSKDSLGEEKFN 100

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             +    L +  +++++    +     TG+  L A +I  L+    +PLP          
Sbjct: 101 LFKKN--LEVGDIILAKGFPFVTK---TGEFSLHASEI-TLATKSIVPLPEKYHGLTDIE 154

Query: 124 IRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            R++ R++D+  +  + K+ + R+++++ +R     + F+E  TP++   +        V
Sbjct: 155 QRYRKRYVDMIMNAEVRKDFLTRSKVVSLIRHFFEEKGFLEVETPMMHPIAGGANAKPFV 214

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
               + G    L  AP+ Y + L+  GF+  F+I  CFR+E       P EF  ++   +
Sbjct: 215 TFHNSLGVERFLRIAPELYLKRLVVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWA 273

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGT 288
           +    D+++  E +   + E+   G  +         S  F RI Y DA+++YG 
Sbjct: 274 YHNYKDLMDLTEELFALLLEKLQLGKIIEFDGQKIDFSKPFERITYKDALKKYGA 328



 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL   K++R+V LFP
Sbjct: 453 ALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFP 488


>gi|330469417|ref|YP_004407160.1| aspartyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328812388|gb|AEB46560.1| aspartyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 428

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G E+ +GG R H     L A +  G   E VE  + G   AF+ GMPPHGG A 
Sbjct: 343 FDLLFRGLELVTGGQRLHRHADYLTALAARG---EPVEP-YAGYVDAFRHGMPPHGGFAI 398

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R V  L G  N+REV+ FP
Sbjct: 399 GLERFVSRLTGTPNIREVTPFP 420



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 118/296 (39%), Gaps = 32/296 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            G  VR++GWVHR R    + FL +RD  G+ QVV    +   EI        V  +  +
Sbjct: 13  TGGTVRIAGWVHRRRLLKSVAFLIVRDAAGLAQVVVTDPAVRAEIEALPEETVVEVVATV 72

Query: 77  VMSRSA----ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             + +A    E  +  +            ++        LP           +  +  + 
Sbjct: 73  AANPAAPAGVELTDPTVRPLGPPAVPPPFDLYRPTLTASLPT----------QLDHAPVA 122

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR  +    +      +   R  + A  F+E  TP + ASS E   +        + ++ 
Sbjct: 123 LRHPSRSAAVRVSAAAVAGFRATLDAHRFVEIHTPKVVASSTESGANVFALDWFGRPAYL 182

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILN 251
           A  Q+PQ YKQ LM    +R +++ P FR E   + R   ++  LD E+ F+ +  D++ 
Sbjct: 183 A--QSPQFYKQ-LMVGVVERVYEVGPVFRAEPHDTVRHLAQYTSLDAELGFITDHRDVMA 239

Query: 252 TMENVLRGVFEEFSN---------GNT---VSNNFLRICYDDAIRRYG--TDKPDL 293
            + + L G+ +   +         G T   V      + + +A+R  G   D+PDL
Sbjct: 240 VLRDTLAGMLDTVVDMAGAALATLGVTPPQVPAQIPEVHFTEALRIAGAPADEPDL 295


>gi|163803525|ref|ZP_02197394.1| lysyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159172660|gb|EDP57513.1| lysyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 510

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 118/243 (48%), Gaps = 25/243 (10%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIIN 150
           G + ++ ++ E+L+ A   PLP        + +R++ R++DL   +   +  V R+++++
Sbjct: 133 GDLYVNMEEFELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMS 191

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 192 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  + +E     
Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSIAQEVLGST 308

Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEF 311
           ++            + R+   +AI+ Y  D        + D++N  +M ++ +  VH E 
Sbjct: 309 SMPYGDDTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKS-VHVEV 367

Query: 312 RVF 314
             F
Sbjct: 368 EPF 370



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 469 ALEHGLPPTAGQGIGIDRLVMLLTDTHTIRDVILFP 504


>gi|302385515|ref|YP_003821337.1| lysyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302196143|gb|ADL03714.1| lysyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 501

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 133/289 (46%), Gaps = 38/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F +++D  G  Q     DS   E  K  +   +  I G+ 
Sbjct: 62  GKEVSIAGRLMSKRVMGKASFCNVQDLKGNIQSYVARDSIGEEEYKEFKKLDIGDIVGI- 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---- 133
                + I     TG+I + A+ + +L+ + ++ LP          IR++ R++DL    
Sbjct: 121 -----KGIAFTTKTGEISIHAESVHLLTKSLQI-LPEKFHGLTNTDIRYRQRYVDLIMNP 174

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             RDT     VKR+++I ++R  + A+ F+E  TP+L A++   A      +R  +  + 
Sbjct: 175 EVRDTF----VKRSQVIKAIRDHLDAQGFMEVETPMLVANAGGAA------ARPFETHYN 224

Query: 193 ALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           AL +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + 
Sbjct: 225 ALDEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDY 283

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
             +++ +EN+ R V  +      VS +         F RI   DA+++Y
Sbjct: 284 HGMMDLVENLFRSVALKVLGTAVVSYDGVEIDLSKPFERITMVDALKKY 332



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP GGI  GIDR VMLL  +  +R+V LFP
Sbjct: 459 ALMIGMPPTGGIGIGIDRFVMLLTDSYAIRDVLLFP 494


>gi|223933851|ref|ZP_03625817.1| Asparagine--tRNA ligase [Streptococcus suis 89/1591]
 gi|223897469|gb|EEF63864.1| Asparagine--tRNA ligase [Streptococcus suis 89/1591]
          Length = 353

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 115/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G + FL +RD     Q VA  P+          +  F++AK +
Sbjct: 15  VGQEVTIGAWVANKSGKGKLAFLQLRDGTAFFQAVALKPNFIEKFGEEAGTEKFDVAKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  +++ P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKFG-------YELDVTDLEVIGESQDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR          R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGQPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRYIAEPFKRVAYDDAI 295


>gi|296104551|ref|YP_003614697.1| lysyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295059010|gb|ADF63748.1| lysyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 505

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 129/289 (44%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGIYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL   D   
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           K    R++I+  +R  M+  +F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 KTFKIRSQIMAGIRQFMVNRDFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GFDR F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFDRVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295
           R + ++      V            F ++   +AI++Y   T+  DL N
Sbjct: 299 RTLAQDILGTTQVPYGEEVFDFGKPFEKLTMREAIKKYRPETNMADLDN 347



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F +   +K   ++    F   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFQDQVDAKAAGDDEAMFFDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|289450720|ref|YP_003475204.1| asparagine--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289185267|gb|ADC91692.1| asparagine--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 464

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/321 (20%), Positives = 125/321 (38%), Gaps = 49/321 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +G  V ++GW   +R      F+D+ D     + QVVA  D + +       SE V   +
Sbjct: 18  LGQQVTVAGWGRTIRDQKQFCFVDLADGSCLPMLQVVATTDLSNY-------SELVKAGN 70

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G  +  + + +NA      +E+ A  +E+  ++     P+  +R   E +R     L  R
Sbjct: 71  GAALIVTGKIVNAPQGNRPVEMQAHTVEVEGISPS-DYPLQPKRHTVEYLR-TIAHLRPR 128

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +  +     R+    ++       NF+   TP++T S  EGA +    + ++Q      
Sbjct: 129 TNLFNAAFRVRSEAAFAIHDFFHKRNFVYVHTPLITGSDCEGAGEMFTVTTLDQKHIPFN 188

Query: 195 PQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            Q    Y Q                  + A  F   +   P FR E+  + R   EF+ +
Sbjct: 189 DQGEVDYTQDFFGKHTHLTVSGQLNGEVFAQAFKNIYTFGPTFRAENSYTPRHAAEFWMI 248

Query: 238 DMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLR 276
           + E++F + +D++   +++L+ +            EF N            +  + +F  
Sbjct: 249 EPELAFADLNDMMGVAKDMLQHIITHILKNCPNEIEFFNKFIDKGIKDRLEHVATADFAH 308

Query: 277 ICYDDAIRRYGTDKPDLRNPI 297
           + Y DAI      K D + P+
Sbjct: 309 VTYTDAIELLKQAKQDFKYPV 329


>gi|67467598|ref|XP_649894.1| aspartyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56466418|gb|EAL44507.1| aspartyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 544

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/341 (22%), Positives = 135/341 (39%), Gaps = 84/341 (24%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSEWVLCIDGL 76
           V +   V  VR  G ++FL +R   Y    +V   ++   E  +    + +E +  I G+
Sbjct: 61  VTIRARVQAVRGKGNMVFLFLRKGIYTCQALVMKSETISKEFVQFCQKISAESICDITGI 120

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFKYRFLDLRR 135
           V  ++ E          +E+    I ++S+AE  PLP+   +  +P S+ FK +  D+ +
Sbjct: 121 V--KAVEKPIEKATQQDVEIHVTSIAVVSLAE-YPLPMQIEDLTFPSSV-FKKQEEDIAK 176

Query: 136 ----------DTLHKNIVKR-------------------------TRIINSM-------- 152
                     D   K++ KR                         TR+ N M        
Sbjct: 177 VDEKIAKFLKDNEGKDLTKRPLKDEYAKLLKEKASAQKYVKVSQDTRLDNRMLDLRTVTN 236

Query: 153 --------------RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                         R  + ++ F+E  TP L   S EG  +       ++ ++ A  Q+P
Sbjct: 237 IAIFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSSEGGSNIFEVKYFDRKAYLA--QSP 294

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257
           Q YKQ+ +   F + F++ P FR E+  + R   EF  LD+EM  VE   + ++ ME + 
Sbjct: 295 QLYKQMAIMGDFRKVFEVGPVFRAENSNTRRHLTEFEGLDIEMEIVENYHECIDVMEKLF 354

Query: 258 RGVFEEFSN---------------GNTVSNNFLRICYDDAI 283
             +F+E                   + +   FLR+ Y +AI
Sbjct: 355 TFIFDEIPKRFPDELKVIRKQYPFEDLIYRPFLRLTYKEAI 395



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  E +++     G+    +++       +F+ G  PH G   
Sbjct: 459 YDVFVRGQEITSGAQRIHDPEFLMKRCIEKGVDPATLKDYI----ESFRFGSWPHAGCGI 514

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RI ML LG  N+R+V+LFP
Sbjct: 515 GLERITMLYLGIPNIRKVTLFP 536


>gi|256847329|ref|ZP_05552775.1| asparaginyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715993|gb|EEU30968.1| asparaginyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 432

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 19/232 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAK-SVRSEWVLC 72
           VG  V++  W+   R  G I FL +RD  G  Q +    + D A FE AK  +  E    
Sbjct: 13  VGETVKIGVWLTDKRSSGKIAFLQLRDGSGFFQGIIRKNDVDEATFEAAKHDLHPETSFV 72

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G +                 E+    +EI+  ++E P+   G +E+       +R L 
Sbjct: 73  VTGEIAEDKRSKFG-------YEIHINDLEIVGQSDEYPI---GNKEHGIDFLLDHRHLW 122

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       +  R+++  S         F +   PILT+S+PEG  +       ++ ++ 
Sbjct: 123 LRSRKPWALMRIRSQVKLSTMEFFDKHGFTQFDAPILTSSAPEGTTELFNVDYFDEDAY- 181

Query: 193 ALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            L Q+ Q Y +   MA G  R + + P FR E  ++ R   EF+ ++ EM++
Sbjct: 182 -LSQSGQLYGEAGAMALG--RIYTMGPTFRAEKSKTRRHMTEFWMIEPEMAW 230


>gi|19111917|ref|NP_595125.1| cytoplasmic asparagine-tRNA ligase Nrs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|59798599|sp|O94567|SYNC_SCHPO RecName: Full=Probable asparaginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|3850088|emb|CAA21915.1| cytoplasmic asparagine-tRNA ligase Nrs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 568

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 116/289 (40%), Gaps = 35/289 (12%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCIDG 75
           S VR++GWVHR+R   GIIF+ +RD  G  Q V +    D A ++   ++  E  +C+ G
Sbjct: 142 SRVRVNGWVHRMRTQKGIIFIILRDGTGFLQCVLSGKVYDRASYDFI-NLGPESTVCLYG 200

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGER---EYPESIRFKYR 129
           ++     E        G  EL     +IL  A   EE     F  R   E   S     R
Sbjct: 201 VI----KELPEGKSAPGNHELVVDYYQILHAAPTGEE----AFTNRLNAEAEPSYLLDQR 252

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L +R +T    +  R R + +MR         E + P +  +  EG       +   Q 
Sbjct: 253 HLVIRGETASSVLKVRARALRAMRDTFENLKMTEVTPPCMVQTQVEGGATLFKFNYYGQD 312

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y +  + +     + I   FR E   + R   EF  ++ E+ FV   + 
Sbjct: 313 AY--LTQSSQLYLEAALPA-LGSVYTIQESFRAEKSLTRRHLSEFTHVEFELPFVNFGEF 369

Query: 250 LNTMENVLRGVFEEFSNGNTV--------------SNNFLRICYDDAIR 284
           L  +E  +    +   +                  S  F+R+ Y+DAI+
Sbjct: 370 LEIIEEFICQTIDRLLDDPIATPLIKQLNPDFVKPSRPFMRLSYEDAIK 418


>gi|261342292|ref|ZP_05970150.1| lysine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288315633|gb|EFC54571.1| lysine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 505

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 129/289 (44%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L   G ++  
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGIYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL   D   
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           K    R++I+  +R  M+  +F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 KTFKIRSQIMAGIRQFMVNRDFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GFDR F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFDRVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295
           R + ++      V            F ++   +AI++Y   T+  DL N
Sbjct: 299 RTLAQDILGTTEVPYGEEVFDFGKPFEKLTMREAIKKYRPETEMADLDN 347



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F +   +K   ++    F   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFQDQVNAKAAGDDEAMFFDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|227328401|ref|ZP_03832425.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 505

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 12/261 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + ++G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L  
Sbjct: 61  LEELGIEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
             +   +N  + R+ ++ ++R  M+   F+E  TP++    P GA  R F+         
Sbjct: 175 IANDESRNTFRIRSNVMAAIRRFMVDNGFMEVETPMMQVI-PGGASARPFITHHNALDID 233

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++
Sbjct: 234 MY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLI 291

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              EN+ R + ++     TV 
Sbjct: 292 VLTENLFRTLTQDVLGSTTVE 312



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|114673279|ref|XP_512149.2| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic isoform 5 [Pan
           troglodytes]
 gi|114673281|ref|XP_001139185.1| PREDICTED: asparaginyl-tRNA synthetase isoform 4 [Pan troglodytes]
          Length = 548

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 113/289 (39%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V             +  E   C +G+
Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 171

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           ++S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 172 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 231

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ +    R       + E + P L  +  EG           
Sbjct: 232 NRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 291

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  D
Sbjct: 292 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 348

Query: 248 DILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAI 283
           D+LN +E+++  V +                N       F R+ Y DAI
Sbjct: 349 DLLNRLEDLVCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAI 397


>gi|327306760|ref|XP_003238071.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326458327|gb|EGD83780.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 609

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 126/253 (49%), Gaps = 11/253 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           VR++G ++  R  G  +IF D+R      QV      A  ++    + E +   D + ++
Sbjct: 128 VRIAGRIYTKRSSGAKLIFYDLRAEGVKVQVACQAQEATGDMPFEAQHEQLRRGDIVGIV 187

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A+++ +LS    ++P   +G ++  +  RF+ R+LDL  + 
Sbjct: 188 GFPGRTNPKNRDDGELSIFARQVILLSPCLHQIPSEHYGLKD--QEQRFRQRYLDLIMND 245

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194
             +N+ V R++I++ +R      +F+E  TP++ A +    A+ F+   + +N   F  +
Sbjct: 246 SSRNVFVTRSKIVSYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHHNELNMNLFMRI 305

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  E
Sbjct: 306 --APELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDLMNVTE 362

Query: 255 NVLRGVFEEFSNG 267
           +++ G+ +  + G
Sbjct: 363 DLVSGLVKHVTGG 375



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576


>gi|312793712|ref|YP_004026635.1| lysyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180852|gb|ADQ41022.1| lysyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 497

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 116/253 (45%), Gaps = 20/253 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GL 76
           G FV ++G +   R HG   F+DI D  G  Q+    D    E+ +    E+    D G 
Sbjct: 58  GKFVCVAGRMLSKRGHGKASFVDILDTKGKIQIYIKID----EVGEEKYEEFKEYYDIGD 113

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--- 133
           ++    E    +   G+I + A++IE+L+     PLP           R++ R+LDL   
Sbjct: 114 IIGVKGEVFKTH--KGEISVKAKEIEMLTKCLR-PLPEKWHGLKDVDTRYRKRYLDLIVN 170

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
              RDT     +KR+ II S+R  +    F+E  TP+L+  +    AR F+         
Sbjct: 171 PQVRDTF----IKRSLIIRSIRKFLDDRGFLEVETPVLSPIAGGAAARPFITHHNALDID 226

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + + + L+  GFD+ +++   FR+E       P EF  +++  ++ +  D++
Sbjct: 227 LY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIYQAYADYKDMM 284

Query: 251 NTMENVLRGVFEE 263
              E ++  V +E
Sbjct: 285 ELTEKLITTVAQE 297



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFP 491


>gi|303228849|ref|ZP_07315662.1| lysine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516469|gb|EFL58398.1| lysine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 503

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 19/243 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +  +R HG   F +IRD  G  QV    D    +  K V+   +  I GL    
Sbjct: 59  VVIAGRLMTMRSHGKTAFANIRDLSGDIQVYFRKDVLGEDNYKYVKMLDIGDIVGL---- 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----RR 135
             E       +G++ +   K+ +LS A   PLP          +R++ R++DL      R
Sbjct: 115 --EGHVFRTHSGEVTIKVDKLTLLSKALR-PLPEKWHGLKDTELRYRQRYVDLIVNPEVR 171

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
           DT     +KR++I+  +R  M+ + F+E  TP++        AR F+          Y +
Sbjct: 172 DTF----IKRSKIVAKIREYMMNDGFMEVETPMMHPIPGGAAARPFITHHNALDIDIY-M 226

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  G +R F++  CFR+E   +   P EF  ++   ++ + +D +   E
Sbjct: 227 RIAPELYLKRLIVGGMERVFEMNRCFRNEGIDNRHNP-EFTTIESYQAYGDVEDAIRLTE 285

Query: 255 NVL 257
           N++
Sbjct: 286 NLV 288



 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G+PP  G+  GIDR+VM L  + ++R+V LFP+
Sbjct: 453 ALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLFPL 489


>gi|327277896|ref|XP_003223699.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 559

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 26/250 (10%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++F+ +RD  G  Q V + D  C             C +G+
Sbjct: 136 GERVKVFGWVHRLRRQGKNLMFIVLRDGTGYLQCVLS-DELC------------QCYNGV 182

Query: 77  VMSRSAE-----TIN----ANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +      T+N         G  ELS    E++ +A           E    ++  
Sbjct: 183 VLSTESTVAVYGTLNLVPEGKQAPGGHELSCDFWELIGLAPAGGADNLVNEESDVDVQLN 242

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R +TL +    R+ +I S R       + E + P L  +  EG           
Sbjct: 243 NRHMMIRGETLSRIFKVRSTVIQSFRDHFFDRGYYEITPPTLVQTQVEGGSTLFKMDYFG 302

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + ++  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  +
Sbjct: 303 EEAY--LTQSSQLYLETCIPALGDT-FCIAQSYRAEQSRTRRHLAEYTHIEAECPFMSFE 359

Query: 248 DILNTMENVL 257
           D+LN +E+++
Sbjct: 360 DLLNRLEDLV 369



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 476 LMPNVGEIVGGSMRIWDSEELLEGYKREGIDP----TPYYWYTDQRKYGTCPHGGYGLGL 531

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  +L   ++R+V L+P     C
Sbjct: 532 ERFLTWILNRHHIRDVCLYPRFVQRC 557


>gi|300866148|ref|ZP_07110869.1| lysyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300335860|emb|CBN56029.1| lysyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 518

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 113/242 (46%), Gaps = 13/242 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS-EWVLCIDGLVMS 79
           +R+ G +   R  G I F+D++D     Q+         E   S +  + +L +   V  
Sbjct: 61  LRVCGRITSKRDSGSICFIDLKDFSDKIQLKIEKKIVTGESGLSFKQVQKLLDVGDFV-- 118

Query: 80  RSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDL--RRD 136
              E I      G++ +  +++++LS A  + P   +G  + PE  R ++R +DL   + 
Sbjct: 119 -GVEGIGCRTPRGELSILVRELKVLSKATIQFPDAYYGVND-PEICR-RHREMDLAGNQA 175

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
           + H+    R+RI+ S+R  +   +F E  TP L A      AR F+          Y L 
Sbjct: 176 SFHR-FALRSRILQSIRSYLWKADFYEIETPTLQAIYGGAAARPFITHHNALDVDLY-LR 233

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ + +  +  GFDR F++   FR+E   S   P EF  L++  S+ +  DIL  +E+
Sbjct: 234 IAPELFLKRAICGGFDRVFELGRVFRNEGVDSTHNP-EFTSLEVYQSYADYFDILTVVED 292

Query: 256 VL 257
           V+
Sbjct: 293 VM 294



 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A   GMP   G+  GIDR+VMLL   +++R+V +FP
Sbjct: 474 QALSLGMPNCAGMGIGIDRLVMLLTNTQSIRDVVMFP 510


>gi|114673285|ref|XP_001138942.1| PREDICTED: asparaginyl-tRNA synthetase isoform 2 [Pan troglodytes]
          Length = 515

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 113/289 (39%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V             +  E   C +G+
Sbjct: 92  GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 138

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           ++S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 139 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 198

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ +    R       + E + P L  +  EG           
Sbjct: 199 NRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 258

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  D
Sbjct: 259 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 315

Query: 248 DILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAI 283
           D+LN +E+++  V +                N       F R+ Y DAI
Sbjct: 316 DLLNRLEDLVCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAI 364


>gi|27469184|ref|NP_765821.1| lysyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57866087|ref|YP_187752.1| lysyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|242241602|ref|ZP_04796047.1| lysyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|251809824|ref|ZP_04824297.1| lysyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875448|ref|ZP_06284320.1| lysine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|293366159|ref|ZP_06612846.1| lysine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258353|sp|Q8CQV5|SYK_STAES RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71153566|sp|Q5HRN7|SYK_STAEQ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|27316733|gb|AAO05908.1|AE016751_203 lysyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57636745|gb|AAW53533.1| lysyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|242234983|gb|EES37294.1| lysyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|251806692|gb|EES59349.1| lysyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295805|gb|EFA88327.1| lysine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|291319753|gb|EFE60112.1| lysine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329723930|gb|EGG60455.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU144]
 gi|329733011|gb|EGG69350.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU028]
 gi|329737885|gb|EGG74113.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 495

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 19/284 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKS 64
           S  +L   +  S V ++G +   R  G   F  I+D  G  Q+    D      F I K 
Sbjct: 48  SKEELHEKEDESHVSIAGRLMTKRGKGKAGFAHIQDLKGQIQIYVRKDQVGDDQFNIWKM 107

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123
                ++ ++G++   +         TG+I + A+   +LS +   LP    G ++  + 
Sbjct: 108 ADLGDIIGVEGVMFKTN---------TGEISVKAKSFTLLSKSLRPLPDKFHGLQDIEQ- 157

Query: 124 IRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
            R++ R+LDL   +   +  + R++II  MR  +  + F+E  TP++   +    AR F+
Sbjct: 158 -RYRQRYLDLITNEDSTQTFINRSKIIQEMRNYLNKQGFLEVETPMMHQIAGGAAARPFV 216

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                   + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  
Sbjct: 217 THHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYE 274

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           ++ +  DI++  EN++R + +E      V  N   I  + + +R
Sbjct: 275 AYADYHDIMDLTENMVRHIAQEVFGSAKVQYNDEEIDLESSWKR 318



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490


>gi|242011230|ref|XP_002426358.1| predicted protein [Pediculus humanus corporis]
 gi|212510435|gb|EEB13620.1| predicted protein [Pediculus humanus corporis]
          Length = 571

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 118/257 (45%), Gaps = 20/257 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +G  +  + V L+G +H +R  G  +IF D+R      Q++AN        AK   SE +
Sbjct: 101 VGHVEEDTVVNLAGRIHSIRGSGSKLIFYDLRSEGVKIQIMAN--------AKYYVSEEL 152

Query: 71  LCIDGLVMSRS----AETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIR 125
              D   + R      +        G++ +  ++I +L+     LP   +G ++  +  R
Sbjct: 153 FSEDTSKLGRGDIVGVKGHPGKTKKGELSVIPKEITLLTPCLHMLPHLHYGLKD--KETR 210

Query: 126 FKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
           F+ R+LD +  D + +    R +II+ +R  +    F+E  TPI+   +    A+ F   
Sbjct: 211 FRMRYLDCILNDYVRQKFFIRAQIISYIRRFLDELGFLEIETPIMNMIAGGASAKPFTTY 270

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                 S Y L  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++
Sbjct: 271 HNELNMSLY-LRVAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAY 328

Query: 244 VEQDDILNTMENVLRGV 260
            + +D++   E +L G+
Sbjct: 329 ADYNDLMEITEKLLSGM 345



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  + N++EV  FP
Sbjct: 520 ALEYGLPPTGGWGMGIDRLTMFLTDSNNIKEVLFFP 555


>gi|198431081|ref|XP_002128269.1| PREDICTED: similar to asparaginyl-tRNA synthetase [Ciona
           intestinalis]
          Length = 559

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 109/248 (43%), Gaps = 8/248 (3%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V+++GW HR+R  G  ++F+ +RD  G  Q V N        A  + +E  +C+ G+
Sbjct: 136 GQRVKVNGWSHRIRRQGKTLMFIVLRDGSGYLQAVLNDQLCQTYNAVMLSTESTVCLYGV 195

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +       +      G  EL     E++ +A    +     +E    +    R L +R +
Sbjct: 196 ITP----VMEGKSAPGGHELICDYWELIGLAPPGGIDTVLNQEADVDVMLDNRHLVIRGE 251

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
              K +  R+ ++ + R       + E + P L  +  EG           + ++  L Q
Sbjct: 252 QTSKILRVRSYLMQAFRDHYFERGYYEVTPPCLVQTQCEGGSTLFKLDFFGEQAY--LTQ 309

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  + S  D  F +A  +R E  R+ R   E+  ++ E +F+  +D+L+ +E++
Sbjct: 310 SSQLYLETCLPSLGD-VFCLAESYRAEQSRTRRHLAEYTHVEAECAFITFNDLLDRLEDL 368

Query: 257 LRGVFEEF 264
           +  V ++ 
Sbjct: 369 ICDVVDKL 376


>gi|4758762|ref|NP_004530.1| asparaginyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|3915059|sp|O43776|SYNC_HUMAN RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|2764505|emb|CAA04008.1| asparaginyl-tRNA synthetase [Homo sapiens]
 gi|3894218|dbj|BAA34600.1| Asparaginyl tRNA Synthetase [Homo sapiens]
 gi|12804549|gb|AAH01687.1| Asparaginyl-tRNA synthetase [Homo sapiens]
 gi|119583452|gb|EAW63048.1| asparaginyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|261859390|dbj|BAI46217.1| asparaginyl-tRNA synthetase [synthetic construct]
          Length = 548

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 113/289 (39%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V             +  E   C +G+
Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 171

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           ++S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 172 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 231

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ +    R       + E + P L  +  EG           
Sbjct: 232 NRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 291

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  D
Sbjct: 292 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 348

Query: 248 DILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAI 283
           D+LN +E+++  V +                N       F R+ Y DAI
Sbjct: 349 DLLNRLEDLVCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAI 397


>gi|158522857|ref|YP_001530727.1| lysyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158511683|gb|ABW68650.1| lysyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 484

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 137/307 (44%), Gaps = 39/307 (12%)

Query: 6   THSCGD-LGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD- 55
           TH+  D LG+ + G        +   L+G +  +   G   F+  RD  G+ Q     D 
Sbjct: 19  THTVADMLGLIEAGRPPSPESDNLPVLAGRMMAINRFGKAAFVRFRDRTGLMQAYIQKDK 78

Query: 56  --SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
             S  + + K +    V+ + G +             TG+  + A+ I +L  A   PLP
Sbjct: 79  VGSDAYALFKQMDVGDVIGLSGGLFQTK---------TGEWTVQAETIRLLCKATR-PLP 128

Query: 114 -VFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA 171
             F   + PE  R++ R+LDL  ++  +++ ++R+R I ++R  ++  +F+E  TP++  
Sbjct: 129 EKFHGLKDPEK-RYRKRYLDLIMNSATRDVFIRRSRAIQAIRTFLLERDFLEVETPMMQ- 186

Query: 172 SSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             P GA  R F+          + L  AP+ Y + L+  GF+R F+I   FR+E   +  
Sbjct: 187 PIPGGAEARPFVTHHNALDMDLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGISTRH 245

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYD 280
            P EF  L+   ++ +   ++   E++   V E  +    V         S  + R+   
Sbjct: 246 NP-EFTMLEFYQAYADYQGLMAMTEDLFCHVAEAVTGSRQVVYQAHTIDFSGPWPRVPLL 304

Query: 281 DAIRRYG 287
           +A++R G
Sbjct: 305 EALQRIG 311



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPH 536
           +++L   G EIA+G    +  E   Q F+    +++  ++    +      A + GMPP 
Sbjct: 387 RFELFIAGNEIANGFSELNDPEEQRQRFAAQVAARKAGDDEAHFMDEDYIEALEYGMPPT 446

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  A ++REV LFP
Sbjct: 447 AGEGIGIDRLVMLLTDAPSIREVILFP 473


>gi|304405774|ref|ZP_07387432.1| lysyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304345017|gb|EFM10853.1| lysyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 505

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 122/252 (48%), Gaps = 12/252 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L+G + + R  G   F  I+D  G  Q+ A  D+    ++++  + + L   G ++  
Sbjct: 68  VALAGRIMQKRGMGKASFAHIQDLTGKIQIYARKDT----LSETEYAAFDLLDIGDIVGV 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLH 139
                  N  TG+  + A++I +L+ +  LPLP          +R++ R++DL  +  + 
Sbjct: 124 RGVVFKTN--TGETSVKAKEIVVLTKSL-LPLPDKHHGLKDVELRYRQRYVDLITNPDVQ 180

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  + R+RII SMR  + +  ++E  TP L A +    AR F+          Y +  A 
Sbjct: 181 QTFIARSRIIQSMRRYLDSLGYLEVETPTLHAIAGGASARPFITHHNALDMQLY-MRIAI 239

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+  G ++ ++I   +R+E   +   P EF  +++  ++ +  DI+   EN+++
Sbjct: 240 ELHLKRLIVGGLEKVYEIGRVYRNEGISTRHNP-EFTMIELYEAYADYKDIMALTENLVK 298

Query: 259 GVFEEFSNGNTV 270
            + +E   G TV
Sbjct: 299 HIAQEVL-GTTV 309



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL    ++R+V LFP
Sbjct: 461 RALEYGMPPTGGLGIGIDRLVMLLTNQPSIRDVLLFP 497


>gi|219126452|ref|XP_002183471.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405227|gb|EEC45171.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 467

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/291 (20%), Positives = 118/291 (40%), Gaps = 33/291 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GWV  VR    + F+++ D   ++  Q V   D    ++ ++ ++E      G  +
Sbjct: 5   VSIKGWVRTVRKQKTLAFVEVNDGSNLSGIQCVIVFD----KVDEATKAELDKVTTGCAV 60

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
             +   + +      +EL+A  + ++        P+  +R   E +R     L  R +T+
Sbjct: 61  ELTGPLVASQGGKQAVELAATVLRVVGACPAETYPLAKKRHTLEYLR-SIAHLRPRTNTI 119

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                 R+ +  ++      + F+   TP++TAS  EGA +    + +N  S   LP+A 
Sbjct: 120 AAVARVRSHLAGAIHAFFQTQGFVYVQTPLVTASDCEGAGELFRVTTLNLDSVSTLPKAK 179

Query: 199 QQ---------YKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPG 232
            +         Y +        L  SG              +   P FR E+ ++ R   
Sbjct: 180 NENGKEQDRVDYSEDFFGKPAYLTVSGQLGGETHACALGDIYTFGPTFRAENSQTSRHLA 239

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
           EF+ ++ EM+F +    +N  EN+L+ V +   +       F +  YD A+
Sbjct: 240 EFHMVEPEMAFADLTSAMNNAENMLKYVVQHVLDSCGEDLEFFQKFYDKAL 290



 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 15/87 (17%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE-----VVENRFGGLYRAFQCGMPPH 536
           DL+  G  E+  G  R    +V+ Q  ++VG+ KE     +   RFG +         PH
Sbjct: 382 DLLVPGVGELIGGSQREERLDVLEQKIADVGLDKEDYWWYLDLRRFGSV---------PH 432

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   G +R+V  + G +N+RE   FP
Sbjct: 433 AGYGLGFERLVTYVCGIENIREAIAFP 459


>gi|156542803|ref|XP_001607568.1| PREDICTED: similar to lysyl-tRNA synthetase [Nasonia vitripennis]
          Length = 585

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 110/249 (44%), Gaps = 18/249 (7%)

Query: 19  SFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
            F  ++G VH +R  G  +IF D+R      QV+AN        A+    E    +D   
Sbjct: 111 EFCSIAGRVHSIRRAGAKLIFFDLRGEGTKVQVMAN--------ARHYYDEEKYVVDTDK 162

Query: 78  MSRS----AETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132
           + R      E        G+  +  + I++LS     LP   FG ++  +  RF+ R+LD
Sbjct: 163 IGRGDIIGVEGFPCKSKKGEFSIMPKSIKLLSPCLHMLPHLHFGLKD--KETRFRQRYLD 220

Query: 133 LR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           L   D + +    R +II+ +R  +    F+E  TP++   +        V    +    
Sbjct: 221 LIINDKVRQKFYVRAKIISYLRKFLDDLGFLEIETPMMNMIAGGATAKPFVTHHNDLNMD 280

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +  AP+ Y ++L+  G DR +++   FR+E       P EF   +  M++ + +D+++
Sbjct: 281 LYMRIAPELYHKMLVVGGIDRVYEVGRQFRNEGIDMTHNP-EFTTCEFYMAYADYNDLMS 339

Query: 252 TMENVLRGV 260
             E ++ G+
Sbjct: 340 ITEELVSGM 348



 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV  FP
Sbjct: 523 ALEYGLPPTAGWGIGIDRLTMFLTDSNNIKEVLFFP 558


>gi|119583453|gb|EAW63049.1| asparaginyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
          Length = 547

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 113/289 (39%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V             +  E   C +G+
Sbjct: 124 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 170

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           ++S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 171 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 230

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ +    R       + E + P L  +  EG           
Sbjct: 231 NRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 290

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  D
Sbjct: 291 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 347

Query: 248 DILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAI 283
           D+LN +E+++  V +                N       F R+ Y DAI
Sbjct: 348 DLLNRLEDLVCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAI 396


>gi|221068672|ref|ZP_03544777.1| lysyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220713695|gb|EED69063.1| lysyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 514

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 125/287 (43%), Gaps = 32/287 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLC 72
            G  V ++G +   R  G   F  ++D  G  Q     D+   E+    + +W    ++ 
Sbjct: 72  AGVAVSVAGRMMLKRVMGKASFATVQDATGRIQAYVTRDAVGEEVYADFK-KWDLGDIIA 130

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFL 131
           ++G +M            TG++ + A KI +L+ +   +P    G  +  + +R   R++
Sbjct: 131 VEGQLMKTK---------TGELSIKAAKIRLLTKSLRPMPDKFHGMADLEQKVR--QRYV 179

Query: 132 DLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQ 188
           DL  D    K  V R++ +  +R  M+   F+E  TP+L    P GA  + F+       
Sbjct: 180 DLMTDEEARKRFVARSKAVAGIRDFMVEHGFLEVETPMLH-PIPGGANAKPFITHHNALD 238

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D
Sbjct: 239 QEMY-LRIAPELYLKRLIVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYQD 296

Query: 249 ILNTMENVLR-------GVFEEFSNGNTV--SNNFLRICYDDAIRRY 286
           +++  E ++R       G  E    G  V  +  F R+   +AI +Y
Sbjct: 297 LMDYTEKLIRDAAIKAVGTLELSYGGKPVDLAKPFERLTIPEAIVKY 343



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR +MLL  + ++R+V LFP
Sbjct: 472 RALEYGMPPTGGCGIGIDRFMMLLTDSASIRDVILFP 508


>gi|56459930|ref|YP_155211.1| lysyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81363138|sp|Q5QYV9|SYK_IDILO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|56178940|gb|AAV81662.1| Lysyl-tRNA synthetase class II [Idiomarina loihiensis L2TR]
          Length = 503

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 12/252 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +++ G  V+++G +   R  G   F  I+D  G  Q+    D+       +   +W L  
Sbjct: 58  LAEKGIRVKVAGRMMTRRIMGKASFATIQDMSGKIQLYVARDNLPEGYYNTEFKKWDL-- 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLD 132
            G ++  S        ITG  ELS Q  E+  + + L PLP        + +R++ R+LD
Sbjct: 116 -GDILGASGTLF----ITGTGELSVQVDEVRLLTKALRPLPDKFHGLSDQEMRYRQRYLD 170

Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L   +      + R++II+ +R  +    F+E  TP++ A      AR F          
Sbjct: 171 LITNEESRSTFMARSKIIDYIRRFLSDRQFLEVETPMMQAIPGGAAARPFSTHHNALDME 230

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  L+   ++ +  D++
Sbjct: 231 LF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNP-EFTMLEFYWAYADYHDLM 288

Query: 251 NTMENVLRGVFE 262
           +  E +LRG  E
Sbjct: 289 DLTEQMLRGAAE 300



 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 484 LVCNGFEIASGG--IRNHMSEVMLQAFSNVGISKEVVENRFGG----------LYRAFQC 531
            V + FE  +GG  + N  SE+   A       +E VE +  G             A + 
Sbjct: 406 FVTDRFEFFAGGRELANGFSELN-DAEDQAERFREQVEQKEAGDDEAMFYDEDYVTALEH 464

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 465 GMPPTAGQGIGIDRLVMLLTDSASIRDVLLFP 496


>gi|270264899|ref|ZP_06193163.1| lysyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270041197|gb|EFA14297.1| lysyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 505

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 130/291 (44%), Gaps = 23/291 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G 
Sbjct: 64  LGVEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGVYNEQFKKWDL---GD 120

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +
Sbjct: 121 ILGARGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
              +N  K R++++  +R  M+   F+E  TP++    P GA  R F+          Y 
Sbjct: 178 DESRNTFKVRSQVMAGIRNFMVERGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY- 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   
Sbjct: 236 LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIELT 294

Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDL 293
           E++ R + ++      V            F ++   +AI++Y   TD  DL
Sbjct: 295 ESLFRTLTQDVLGKTQVQYGDEVFDFGKPFEKLTMTEAIKKYRPETDLADL 345



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F++   +K+  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFADQVNAKDAGDDEAMFYDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|51245183|ref|YP_065067.1| asparaginyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|59798522|sp|Q6ANL4|SYN_DESPS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|50876220|emb|CAG36060.1| probable asparaginyl-tRNA synthetase [Desulfotalea psychrophila
           LSv54]
          Length = 449

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 128/292 (43%), Gaps = 38/292 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEI-AKSVRSEWVLCIDGLV 77
           V ++GW+   R  G   FL++ D   +   QV+A+     +E   K + +   + ++G++
Sbjct: 18  VTVAGWIRTRRDTGDFSFLEVNDGSTLINMQVIADKSLGNYEEEVKKLSTGCSVMVEGVL 77

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
               A+        GQ +E+ A  + ++  A+    P+  +R   E +R +   L  R +
Sbjct: 78  KESPAK--------GQSVEVHASSVTVVGWADPETYPLQKKRHSLEFLR-EISHLRPRTN 128

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVNQGSFYALP 195
            +      R+R+  ++      + F +  TPI+T S  EGA + F V +    G F+  P
Sbjct: 129 AISAVARVRSRLSYAVHNFFQEKGFTQVHTPIITTSDCEGAGEMFQVAATGKDGHFFGAP 188

Query: 196 QAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                  QL   + A+     +   P FR E+  + R   EF+ ++ EM+F +    +  
Sbjct: 189 AGLTVSGQLQAEVYATALGDVYTFGPTFRAENSNTSRHLAEFWMIEPEMAFCDLQGDMEV 248

Query: 253 MENVLRGV--------------FEEF-SNG------NTVSNNFLRICYDDAI 283
            E +L+ V              F++F S G      + ++++F R+ Y +A+
Sbjct: 249 AEEMLKYVLADVLEHCVTDMNLFDKFISKGIIERLQSVLAHDFARVTYTEAV 300



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D++  G  E+  G  R    +++ +     G+  E     +G      + G  PH G   
Sbjct: 364 DILVPGIGELVGGSQREERYDLLAERMEAAGLDLE----EYGWYLDLRKYGTVPHAGFGL 419

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G +R+V  + G  N+REV  FP +  F 
Sbjct: 420 GFERLVQFVTGMANIREVIPFPRTPGFA 447


>gi|170759400|ref|YP_001788859.1| lysyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|238688747|sp|B1KTC1|SYK_CLOBM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|169406389|gb|ACA54800.1| lysine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 504

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 140/330 (42%), Gaps = 39/330 (11%)

Query: 5   RTHSCGDL--GVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++     D+ G  V ++G +   R HG   F DI D YG  Q+    +    E 
Sbjct: 44  RTHTSKEVKDNYEDLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103

Query: 62  AKSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            K  ++     ++ + G V        + +I   Q+   + +          PLP     
Sbjct: 104 LKEYKTFDIGDIISVTGTVFKTKTGETSIHITDFQLVCKSLR----------PLPEKWHG 153

Query: 119 EYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                +R++ R++DL      RDT     +KRT II SMR  +    F+E  TPIL+  +
Sbjct: 154 LKDPDLRYRQRYVDLIINQDVRDTF----IKRTAIIKSMREFLDNRGFLEVETPILSPIA 209

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+          Y L  A + Y + L+  GF++ ++I   FR+E       P 
Sbjct: 210 GGAAAKPFITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283
           EF  +++  ++ + +D++   EN++  + E+      V            + R+   DA+
Sbjct: 268 EFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEIDFTPPWRRLTMVDAV 327

Query: 284 RRY-GTDKPDLRNPIIMHNVTEHFVHSEFR 312
           + Y G D   +++ I    + +   H EF+
Sbjct: 328 KEYAGVDFNIIKDDIEARAIAKE-KHIEFK 356



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + GMPP GG+  GIDR++M L    ++R+V LFP
Sbjct: 460 SLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFP 495


>gi|154499973|ref|ZP_02038011.1| hypothetical protein BACCAP_03630 [Bacteroides capillosus ATCC
           29799]
 gi|150271571|gb|EDM98828.1| hypothetical protein BACCAP_03630 [Bacteroides capillosus ATCC
           29799]
          Length = 440

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 130/315 (41%), Gaps = 55/315 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + G VH +R  GG+ FL +R   G+ Q V  P+               + +DG+    
Sbjct: 28  VSVRGMVHALRDMGGLTFLLLRKGDGVLQCVCPPE---------------VELDGVTEEC 72

Query: 81  SAETINA----NIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           + E +          G  EL+A  + +LS  A   P+P+    ++  ++    R L LR 
Sbjct: 73  AVEVLGTVHPEERAPGGAELAAAAVRVLSRPAAPAPVPL---SKWKLNLTLDSR-LSLRP 128

Query: 136 DTLHKNIVKRTRIINSMRCR-----MIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
             L     +    I +  CR     + +++F E  TP +  +  EG  +        + +
Sbjct: 129 AVLRSLRERSVFRIQAGICRAFREYLQSQDFTEIHTPKIVHAGAEGGSNIFRLDYFGRKA 188

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDI 249
           F  L Q+PQ YKQ  M   F+R F++ P FR E   + R   E+  +D EM +++   DI
Sbjct: 189 F--LTQSPQFYKQT-MVPVFERVFEVGPVFRAEKHSTTRHLNEYTSMDFEMGYIDSFYDI 245

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRI-----------C--YDDAIR----RYGTDKPD 292
           +      LR  F     G   + +  R+           C  +D+A R    +YG     
Sbjct: 246 IAMETGFLRYCFRLL--GEEYAGDLARLDITLPEMKDIPCVRFDEAKRLAAEKYGY---A 300

Query: 293 LRNPIIMHNVTEHFV 307
           +RNP  +    EH +
Sbjct: 301 IRNPYDLEPEEEHAI 315



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G E+ +GG R H     +     +G+     E+         + G PPHGG
Sbjct: 352 TLSFDLLFRGMEVTTGGQRIHDYYQQVAKMERLGMDPAEFESYL----MLHKYGAPPHGG 407

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +  G++R+ M L G  NVR  +LFP  + 
Sbjct: 408 LGIGLERLTMQLCGLDNVRLATLFPRDRT 436


>gi|71020717|ref|XP_760589.1| hypothetical protein UM04442.1 [Ustilago maydis 521]
 gi|46100477|gb|EAK85710.1| hypothetical protein UM04442.1 [Ustilago maydis 521]
          Length = 583

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 11/244 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V++ GWVHR+R    + F+ +RD  G  QVV +        A ++ +E  + I G + + 
Sbjct: 161 VKICGWVHRLRSQKDLTFIVLRDGTGYLQVVLSGKLTTTYDALTLTTESTVEIQGQLKA- 219

Query: 81  SAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                      G  EL A   + L  A   +E    V  E   P S+  + R L +R +T
Sbjct: 220 ---VPEGKTAPGGHELVADYWKCLGKAPGGDEAYTNVVAETADPNSLADR-RHLVIRGET 275

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R+ ++ + R         E + P +  +  EG           Q ++  L Q+
Sbjct: 276 ASAVLKVRSEVLKAFRAEFDHLGMTEVTPPCMVQTQVEGGSTLFSFDYYGQPAY--LTQS 333

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  + S  D  F +   FR E   + R   E+  L+ E++F+  DD+L  +E ++
Sbjct: 334 SQLYLETCLPSLGD-VFCVQESFRAEKSHTRRHLSEYTHLEGELAFISFDDLLEHLEQLI 392

Query: 258 RGVF 261
            G  
Sbjct: 393 CGTL 396


>gi|229581408|ref|YP_002839807.1| lysyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012124|gb|ACP47885.1| lysyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 492

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 13/267 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +  +G V  +R HG   F+DI D     Q+    D    E+ +     +     G ++  
Sbjct: 54  ISTAGRVANIRRHGKASFVDIFDEGEKLQIYMRVD----ELKEKYDRFFTYVGRGDIIGV 109

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139
             +      + G++ L  +  ++LS A  L  P    +  PE  R+ +R++D L  D+  
Sbjct: 110 RGDLFYT--MKGELSLLVKDYQLLSKA--LIEPPDWSKLSPE-FRYAHRYVDFLYNDSAR 164

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYALPQAP 198
           K +  R  II  +R  + ++ FIE  TPI+      GA      + VN     + L  A 
Sbjct: 165 KAMEIRYMIIREIREFLYSKGFIEVETPIVQPVYG-GALAKPFKTHVNYLNEDWYLRIAL 223

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y +  +  GF++ F+I   FR+ED      P EF  L++  ++ + +DI+N  E++L+
Sbjct: 224 ELYLKRYIIGGFNKVFEIGKVFRNEDIDVTHNP-EFTLLELYWAYADYNDIMNLTEDLLK 282

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRR 285
            V +  +N   V+     I ++   +R
Sbjct: 283 SVIKRVTNSTKVAYGKYEIDFEAPFKR 309



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA   GMPP GG+  GIDRIVML+    +++EV  FPM
Sbjct: 445 RALSYGMPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482


>gi|145637999|ref|ZP_01793635.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145268809|gb|EDK08776.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 503

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 29/286 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V ++G +   R  G   F+ ++D  G  Q+    D+    +       W    ++ + G 
Sbjct: 65  VAVAGRIMTRRAMGKATFITLQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGDIIGVKGT 124

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           +             T ++ +   ++++L+ A   PLP           R++ R+LDL   
Sbjct: 125 LFKTK---------TNELTIKTTEVQLLTKALR-PLPNKFHGLTDMEARYRQRYLDLISN 174

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           +   +  + R++++  +R   I++ F+E  TP+L    P GA  R F+          Y 
Sbjct: 175 EESRRTFIIRSKVVAGIREFFISKGFMEVETPMLQVI-PGGASARPFITHHNALDVDMY- 232

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F++   FR+E       P EF  L+   S+ +  D+++  
Sbjct: 233 LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQSYADYHDLMDNT 291

Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
           E +LR +  +      V            F RI   DA  +YG DK
Sbjct: 292 EELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATIKYGADK 337



 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536
           +++L   G EI +G    + +E   + F     +KE  ++    +      A + G+PP 
Sbjct: 412 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDDDFVVALEHGLPPT 471

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+ ML   A ++R+V LFP
Sbjct: 472 AGEGLGIDRLAMLYANASSIRDVILFP 498


>gi|126701178|ref|YP_001090075.1| lysyl-tRNA synthetase [Clostridium difficile 630]
 gi|115252615|emb|CAJ70458.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Clostridium
           difficile]
          Length = 509

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 138/305 (45%), Gaps = 36/305 (11%)

Query: 3   RY-RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           RY RTH   D+     S  G   +++G +   R  G   F+DI+D  G  Q     D A 
Sbjct: 43  RYDRTHYSMDIKDNFDSLEGKTTKIAGRIMSKRIQGKAGFIDIQDQEGRIQSYVRLD-AI 101

Query: 59  FEIAKSVRSEW----VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP 113
            E   SV S +    ++ I+G +              G+I + A+ + +L  + + LP  
Sbjct: 102 GEEEYSVFSTYDIGDIVGIEGEIFKTKK---------GEISVKAKSVVLLCKSLQVLPEK 152

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TA 171
             G ++  + +R++ R++DL  +   KN  + RT+ + ++R  +    F+E  TPIL T 
Sbjct: 153 YHGLKD--QELRYRQRYVDLIVNPEVKNAFLIRTKALKALRAYLDDRGFLEVETPILNTI 210

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F+          Y L  A + Y + L+  GFD+ +++   FR+E       P
Sbjct: 211 AGGANARPFITNHNTLHIPMY-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDLKHNP 269

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN------NFL----RICYDD 281
            E+  +++  ++ +  D++   ENV+     E + G+ + N      NF     R+  +D
Sbjct: 270 -EYTAIELYQAYADYTDMMEITENVI-AHMAEVATGSMIVNYQGTEINFTPPWKRMSMED 327

Query: 282 AIRRY 286
            ++ Y
Sbjct: 328 CVKEY 332



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + G+PP GG+  GIDR++MLL  + ++R+V LFP
Sbjct: 458 KALEVGLPPTGGLGIGIDRVIMLLTNSPSIRDVLLFP 494


>gi|325967662|ref|YP_004243854.1| asparaginyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323706865|gb|ADY00352.1| asparaginyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 429

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 26/292 (8%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAKSVR 66
           S  D+   + G  V + GWV+R R     +FL +RD  GI Q V++  D    +I   + 
Sbjct: 2   SIKDVFSLNEGIEVTIRGWVYRKRELKDKVFLVVRDGSGIIQTVISKSDPNLLDIVSKLN 61

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  L + G+V              G  E+  + I    V    P+     +   E +  
Sbjct: 62  MESSLVLTGVVKKEQRAP-------GGAEIHVKSINWYYVGYSFPINEDAAKADSEYL-L 113

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L +R   +   +  R  +  ++     + ++ E   P+  +++ EG          
Sbjct: 114 DVRHLWVRSRRMWAVLRVRHTVFGAIHEFFRSRDYYEVQGPMFVSAAVEGGATLFPVKYF 173

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE- 245
           ++   Y L Q+ Q Y ++L+ +  +R + IAP FR E  R+ R   EF+  + E ++++ 
Sbjct: 174 DREDVY-LTQSSQFYLEILIYA-LERVYTIAPSFRAESSRTRRHLTEFWHAEAEEAWLQF 231

Query: 246 --------------QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
                          D +L   ++ L+ +  +      V   F R+ YD+AI
Sbjct: 232 NDLLNLLEDLITYVVDKVLKERQDELKLLNRDTKVLENVKPPFYRVSYDEAI 283


>gi|297716158|ref|XP_002834410.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like [Pongo
           abelii]
          Length = 515

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 114/289 (39%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V             +  E   C +G+
Sbjct: 92  GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 138

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           ++S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 139 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 198

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ +    R       + E + P L  +  EG           
Sbjct: 199 NRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 258

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  D
Sbjct: 259 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 315

Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283
           D+LN +E+        VL+      V E   N       F R+ Y DAI
Sbjct: 316 DLLNRLEDLVCDVVDRVLKSPAGSVVHELNPNFQPPKRPFKRMNYSDAI 364


>gi|126305063|ref|XP_001378960.1| PREDICTED: similar to lysyl-tRNA synthetase [Monodelphis domestica]
          Length = 604

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           VR++G +H  R  GG +IF D+R      QV+AN      +   F I   +    +  + 
Sbjct: 133 VRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRDFKSEEEFFPINNKLPRGDIFGVP 192

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ L   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 193 G---------NPGRTKRGELSLIPHEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 241

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 242 ILNDFVRQKFITRSKIITYIRSFLDELGFLEIETPMMNVI-PGGAVAKPFITYHNELDMN 300

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 301 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 358

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    VS
Sbjct: 359 EITEKMISGMVKNITGSYKVS 379



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 485 VCNGFEIASGGIRN-HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +CN +   +  +R   + E   +A +       V+++ F     A + G+PP  G   GI
Sbjct: 502 ICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMVIDDNFC---TALEYGLPPTAGWGMGI 558

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           DR+ M L  + N++EV LFP
Sbjct: 559 DRLTMFLTDSNNIKEVLLFP 578


>gi|154249833|ref|YP_001410658.1| lysyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769382|sp|A7HM68|SYK_FERNB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|154153769|gb|ABS61001.1| lysyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 509

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 16/269 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAKS-VRSEWVLCIDGLVM 78
           V  +G +  +R HG   F  I+D YG  Q     D +  +E  K  V    ++ ++G+V 
Sbjct: 54  VSTAGRIMSIREHGKSAFFHIKDTYGRIQAYIRKDKTENYEFFKERVTVGDIVGVEGIVF 113

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
             +         TG+I +  +K E+L V    P+P        + + ++ R++D+   D 
Sbjct: 114 KSN---------TGEITILVEKFELL-VKPLRPMPEKWHGIKDKEVLYRQRYVDMIANDE 163

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQ 196
             K    R+ II  +R  +  + F E  TPIL   +    AR F+          Y L  
Sbjct: 164 TIKRFRMRSDIIRMIREFLTKKGFFEVETPILQYLTGGASARPFITHLNALDIDMY-LRI 222

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + +  +  GFD+ ++I   FR+E       P EF  +++  ++ + +D++N  E +
Sbjct: 223 ATELHLKRFIVGGFDKVYEIGKIFRNEGISYKHHP-EFTSIELYQAYADYEDMMNLTEEL 281

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +  + E+      ++     I +    RR
Sbjct: 282 ITYLVEQLYGTTKITYQGQEIDFTRPWRR 310



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 31/45 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           RA + GMPP GG+  GIDR+VMLL  + N+R+V  FP+ +   D+
Sbjct: 443 RALEYGMPPTGGLGIGIDRLVMLLTDSANIRDVIAFPLVRPEGDI 487


>gi|323705606|ref|ZP_08117180.1| lysyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535083|gb|EGB24860.1| lysyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 506

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 19/259 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCID 74
           G  V ++G +   R HG   F DI+D  G  Q+    D      +EI K +    ++ + 
Sbjct: 58  GKTVTIAGRIMSKRGHGKASFADIQDRDGRIQLYFKMDVLGEKNYEIFKILDIGDIIGVT 117

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           G V             TG++ +  Q  ++LS + + LP    G ++    +R++ R++DL
Sbjct: 118 GEVFKSK---------TGEVTIRVQDFKLLSKSLQILPDKWHGLKD--PDLRYRQRYVDL 166

Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             + T+ +  +KRT II ++R  + +  FIE  TPIL T +    AR F+          
Sbjct: 167 IINPTVKETFIKRTAIIKAIREFLDSRGFIEVETPILHTIAGGAAARPFITHHNALDIDM 226

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G ++ +++   FR+E       P EF  L++  ++ +   +++
Sbjct: 227 Y-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNP-EFTLLELYEAYTDYHGMMD 284

Query: 252 TMENVLRGVFEEFSNGNTV 270
             EN+   V E+ +    +
Sbjct: 285 ITENLFAYVAEKVNGSKKI 303



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 28/43 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR++M +  A ++R+V LFP  +   D
Sbjct: 455 ALEVGMPPTGGLGIGIDRLIMFMTDAYSIRDVILFPTMKPRTD 497


>gi|313906159|ref|ZP_07839507.1| lysyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313468998|gb|EFR64352.1| lysyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 647

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 121/277 (43%), Gaps = 24/277 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  I+D  G+ Q     D+     ++  K +    ++ I+G V
Sbjct: 60  VSIAGRIMSKRVMGKASFCHIQDKQGMIQCYVARDALGEDEYKAFKKMDIGDIVGIEGFV 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRD 136
            +           TG+  + A+KI +LS + + PLP          IR++ R++DL    
Sbjct: 120 FATK---------TGETSVHAKKITLLSKSLQ-PLPEKFHGLVDTDIRYRQRYVDLIMNQ 169

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +    +KR+ II  +R  +   +F+E  TP+L  ++   A    +      G    L  
Sbjct: 170 EVKTTFIKRSEIIREIRNFLAGRDFMEVETPMLVDNAGGAAARPFITHYNALGEDKKLRI 229

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + + Y + L+  G +R F+I   FR+E       P EF  +++  ++ + + ++   E++
Sbjct: 230 SLELYLKRLIVGGLERVFEIGRVFRNEGLDQRHNP-EFTLMELYQAYTDYNGMMELTESM 288

Query: 257 LRGVFEEFSNGNTVS---------NNFLRICYDDAIR 284
            R + E+     T+            F R+  +DAI+
Sbjct: 289 FRYLAEKVCGTTTIQYEDKVIDLGKPFRRLTMEDAIK 325



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP
Sbjct: 454 ALEIGMPPTGGIGYGIDRLVMLLTNSAAIRDVLLFP 489


>gi|152971836|ref|YP_001336945.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|150956685|gb|ABR78715.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 505

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G +++ 
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGVYNDQFKKWDL---GDIIAA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL   D   
Sbjct: 125 RGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           K    R++I+  +R  M+   F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 KTFKVRSQILAGIRQFMVGRGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298

Query: 258 RGVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +      E + G+ V      F ++   +AI++Y   T+  DL N
Sbjct: 299 RTLAQDILGNTEVTYGDQVFDFGKPFEKLTMREAIKKYRPETEMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|157106533|ref|XP_001649366.1| lysyl-tRNA synthetase [Aedes aegypti]
 gi|108868817|gb|EAT33042.1| lysyl-tRNA synthetase [Aedes aegypti]
          Length = 588

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 120/249 (48%), Gaps = 22/249 (8%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           + ++G +H +R  GG +IF D+R      QV+AN        AK   SE     D   + 
Sbjct: 115 LSVAGRIHAIRESGGKLIFYDLRGEGVKLQVMAN--------AKLYESEAAFLEDTSRLR 166

Query: 80  RS----AETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLR 134
           R      +        G++ +  +K+++LS     LP   +G ++  +  RF+ R+LDL 
Sbjct: 167 RGDIVGVQGYPGKTKKGELSVIPRKLKLLSPCLHMLPHLHYGLKD--KETRFRQRYLDLI 224

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSF 191
            +   +NI + R +II+ +R  +    F+E  TP++   +    A+ F+   + +N   F
Sbjct: 225 LNGNVRNIFLVRAKIISYVRQFLDGMGFLEVETPMMNMIAGGATAKPFITHHNDLNMNLF 284

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +  AP+ Y ++L   G DR ++I   FR+E       P EF   +  M++ + +D+++
Sbjct: 285 LRI--APELYLKMLTVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYNDLID 341

Query: 252 TMENVLRGV 260
             E ++ G+
Sbjct: 342 LTEKMVSGM 350



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L    N++EV LFP
Sbjct: 525 ALEYGLPPTGGWGMGIDRLTMFLTDNNNIKEVLLFP 560


>gi|218883641|ref|YP_002428023.1| asparaginyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765257|gb|ACL10656.1| asparaginyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 432

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 119/286 (41%), Gaps = 33/286 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           +GS V + GW++R    GG  F+ +RD  G+ QVV   A    A  +  K +  E  +  
Sbjct: 15  IGSHVCIRGWIYRRSVVGGKAFIRVRDSSGVIQVVVDSARLGEALVDELKDIGLEASVVA 74

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V  R  E        G  EL     +I+  + + P+      EY        R L +
Sbjct: 75  CGTV--RREER-----APGGYELDVDFFKIIGYSRDFPIKGGEGIEY----LLDNRHLWV 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R     K    +  I+ + R       + E + PILTAS+ EG    L P    +   Y 
Sbjct: 124 RSPRFTKIFRIKHTILQAGREYFTRNGWWEVNPPILTASACEGGAT-LFPVEYFESKAY- 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y + L+    ++ + + P FR E  R+ R   E++ L+ E ++   DD++   
Sbjct: 182 LSQSAQLYLEALIYV-LEKVWSLTPSFRAEKSRTRRHLAEYWHLEPEAAWYSMDDMMKVA 240

Query: 254 E----NVLRGVFEEFSN------------GNTVSNNFLRICYDDAI 283
           E    +++  V EE  +               +   + RI YD+AI
Sbjct: 241 EELASHIVTRVLEERRSELVDLGRDIEKLKPAMETPYPRIRYDEAI 286


>gi|196013129|ref|XP_002116426.1| hypothetical protein TRIADDRAFT_38262 [Trichoplax adhaerens]
 gi|190581017|gb|EDV21096.1| hypothetical protein TRIADDRAFT_38262 [Trichoplax adhaerens]
          Length = 549

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 10/244 (4%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-AKSVRSEWVLCIDGLVM 78
           V++ GWVHR+R  G  +IF+ +RD  G  Q V N D  C    A ++ +E+ + + G++ 
Sbjct: 129 VKIYGWVHRLRRQGKNLIFVLLRDGTGYIQCVFN-DKLCHTYDALTLTTEYSIAVYGII- 186

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                        G  EL     E++  A           +    ++  YR + LR DTL
Sbjct: 187 ---EPLPEGKTAPGGHELIVDFWEVVGSAPPGGHDSLVNEDSNVDVQLDYRHMMLRGDTL 243

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
            K +  R+    +         + + + P L  +  EG           + +F  L Q+ 
Sbjct: 244 SKIMKIRSITEKAFNDHFYDRGYFKLTPPTLVQTQVEGGATLFKLDYFGEQAF--LTQSS 301

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           Q Y + ++ S  D Y  IA  +R E  R+ R   E+  ++ E  FV  +D+L+ +E+++ 
Sbjct: 302 QLYLETVLPSMGDVYC-IAQSYRAEQSRTRRHLAEYTHIEAECPFVTFEDMLDKIEDLVV 360

Query: 259 GVFE 262
            V E
Sbjct: 361 DVAE 364



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R H+ E +++ +   GI        +       + G  PHGG   G+
Sbjct: 466 LMPNVGEIVGGSMRTHVLEDLMEGYKRSGIDP----TPYYWYLDQRKYGTCPHGGYGLGM 521

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           +R +  LL   ++R+V+ +P
Sbjct: 522 ERYLTWLLNRPHIRDVTFYP 541


>gi|294671198|ref|ZP_06736052.1| hypothetical protein NEIELOOT_02906 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307136|gb|EFE48379.1| hypothetical protein NEIELOOT_02906 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 503

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 22/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  I+D  G  Q+  N      E+     + W L   G ++  
Sbjct: 68  VKIAGRMMLKRQMGKASFATIQDVTGQIQLYLNNKGVSQEVLDDF-NHWDL---GDIVGA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N   G++ +    I +LS +   PLP   +    +  +++ R++DL  +   +
Sbjct: 124 EGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKYRQRYVDLIANEESR 180

Query: 141 NI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQA 197
           N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+          Y L  A
Sbjct: 181 NTFIKRSQIIQSVRNFMVNEHYLEVETPMM-HPIPGGATAKPFVTHHNALDIPLY-LRIA 238

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F + + ++   E+++
Sbjct: 239 PELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAFSDYERMMQMAEDII 297

Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           R      +    +S N         F R+   DAI++Y
Sbjct: 298 RNASRTVNGTAKISYNGKEVDLESPFERLTILDAIKKY 335



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  E   + F +    K+  ++    +   Y RA + G+PP 
Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|325130491|gb|EGC53248.1| lysyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 503

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      EI     
Sbjct: 54  GEIGKEELDPQGIPVKIAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEILDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANGESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHP-IPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    +S N         F R+   +AI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTAKISYNGKEVDLESPFERLTILEAIKKY 335



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  E   + F +    K+  ++    +   Y RA + G+PP 
Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|37678853|ref|NP_933462.1| lysyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|39932022|sp|Q7MNP6|SYK_VIBVY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|37197594|dbj|BAC93433.1| lysyl-tRNA synthetase, class II [Vibrio vulnificus YJ016]
          Length = 510

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 118/243 (48%), Gaps = 25/243 (10%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150
           G + ++ ++ E+L+ A   PLP        + +R++ R++DL  +   +N  V R+++++
Sbjct: 133 GDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFVVRSKVMS 191

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 192 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V  E     
Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGST 308

Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEF 311
           ++            + R+   +AI+ Y  D        + D++N  +M ++ +  VH E 
Sbjct: 309 SMPYGEHTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKS-VHVEV 367

Query: 312 RVF 314
             F
Sbjct: 368 EPF 370



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 469 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504


>gi|268591698|ref|ZP_06125919.1| lysine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291312657|gb|EFE53110.1| lysine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 505

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 13/260 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + D+   V ++G +   R  G   F  ++D  G  Q+  + D     I      +W L  
Sbjct: 60  LEDLNIEVSIAGRMMTRRIMGKASFATLQDVGGRIQIYVSRDDLAEGIYNEQFKKWDL-- 117

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++            TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 118 -GDILGAKGRLFKTK--TGELTVHCHEVRLLTKALR-PLPDKFHGLSDQETRYRQRYLDL 173

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D      + R++I+  +R  M++  F+E  TP++    P GA  R F+         
Sbjct: 174 IANDESRHTFIVRSKILAEVRNFMVSYGFMEVETPMMQVI-PGGASARPFVTHHNALDID 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++
Sbjct: 233 MY-LRIAPELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMELYMAYADYRDLI 290

Query: 251 NTMENVLRGVFEEFSNGNTV 270
              E++ R + ++   GNTV
Sbjct: 291 ALTEDLFRTLTQKVL-GNTV 309



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 463 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 498


>gi|119468800|ref|XP_001257882.1| lysyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119406034|gb|EAW15985.1| lysyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 605

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 120/251 (47%), Gaps = 7/251 (2%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           VR++G ++  R  G  + F DIR      QVV    +A  ++A   + E +   D + V+
Sbjct: 125 VRIAGRIYTKRSSGSKLFFYDIRAEGVKVQVVCQAQNATGDVAFEAQHEHLRRGDIVGVV 184

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A ++ +L+     +P   +G ++  +  RF+ R+LDL  + 
Sbjct: 185 GFPGRTSPKNRADGELSIFATEVVLLAPCLHAIPSEHYGFQDKEQ--RFRQRYLDLIMNE 242

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
             +N+ V R++I++ +R    + +FIE  TP++ A +        +    +      +  
Sbjct: 243 RSRNVFVTRSKIVSYVRNFFDSRDFIEVETPMMNAIAGGATAKPFITHHNDLDMNLFMRV 302

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  E +
Sbjct: 303 APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNLTEEL 361

Query: 257 LRGVFEEFSNG 267
           + G+ +  + G
Sbjct: 362 ISGLVKHVTGG 372



 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVS-VEQLR 585
           + + G+PP GG   GIDR+VM L    +++EV  FP M ++     + + + V+ +E   
Sbjct: 538 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKEDKTAAEVKTAAEVAGIEPKP 597

Query: 586 ELGLR 590
           E G+R
Sbjct: 598 EEGIR 602


>gi|219120825|ref|XP_002185644.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209582493|gb|ACI65114.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 579

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 6/144 (4%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSM-RCRMIAENFIECSTPILTASSPEGARDF 180
           + +R  YR++DLR    +++I +   ++  + R  ++   F+E  TP L   + EG  D 
Sbjct: 253 QKMRLDYRWIDLRTPA-NQSIFRIESMVGCLFREFLLQRGFVEIHTPKLIGGASEGGSDV 311

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMA-SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  Q +  A+  +PQ +KQ+  A SGF+R F+  P FR E+  + R   EF  LD+
Sbjct: 312 FTLDYFGQSACLAM--SPQLHKQMTAACSGFERVFETGPVFRAENSNTRRHLCEFTGLDL 369

Query: 240 EMSFVEQ-DDILNTMENVLRGVFE 262
           EM   E  D++L  M  +   +F+
Sbjct: 370 EMVIHEHYDEVLAVMSELFIYIFD 393



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 14/114 (12%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF TMP      L  +         YD    G EI SG  R H  +++ +   
Sbjct: 471 KFPLAVRPFYTMPDPNDPKLSNS---------YDFFIRGQEIVSGAQRVHDPDLIEERAK 521

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +GI  E + +       +F+ G  PHGG   G++R+VML LG  N+R+ + FP
Sbjct: 522 ALGIDVESIAD----YVESFRHGALPHGGGGIGLERVVMLFLGLPNIRKAAWFP 571


>gi|317505009|ref|ZP_07962957.1| asparagine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315663891|gb|EFV03610.1| asparagine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 463

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 117/275 (42%), Gaps = 34/275 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  ++ G  + + GWV   R    + F+ + D   I   Q+V +P S   +  
Sbjct: 3   RTKIIDALQCTEYGKDINVKGWVRSHRNSKAVDFIALNDGSTINNIQIVVDPTSMDADTL 62

Query: 63  KSVRSEWVLCIDG-LVMSRSAETINANIITGQ-IELSAQKIEILSVA-EELPLPVFGER- 118
           KS+ +   + + G LV S+ A         GQ +E+ +++IEI  +   + P+   G+  
Sbjct: 63  KSITTGACISVVGTLVQSQGA---------GQTVEIQSKEIEIYGLCPSDYPMQKKGQSF 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA- 177
           EY      KY  L LR +T       R  +  ++        F    TPI+TAS  EGA 
Sbjct: 114 EYMR----KYAHLRLRTNTFGAVFRIRHNMAIAVHKYFHDHGFYYFHTPIITASDAEGAG 169

Query: 178 --------------RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
                         +D  VP   +            Q +  L A+     +   P FR E
Sbjct: 170 EMFQVTTLDLSRTGKDDTVPYEKDFFGKKTNLTVSGQLEGELGATALGAIYTFGPTFRAE 229

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +  + R   EF+ ++ E++F+EQD++++  E+ ++
Sbjct: 230 NSNTPRHLAEFWMIEPEVAFLEQDELMDLEEDFIK 264


>gi|83767852|dbj|BAE57991.1| unnamed protein product [Aspergillus oryzae]
          Length = 531

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 138/332 (41%), Gaps = 44/332 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACF 59
           +H +     G +G + +   +RL G +   R  G  +IF DI  +    QV+ N      
Sbjct: 64  LHSWSLGDFGQVGSTLLSFVLRLVGRIRTYRLAGSKLIFFDIVQNGHKVQVMCNLRQLPG 123

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP-------- 111
              ++ +  + L   G          +A  +TG+   + +  E+  VA ELP        
Sbjct: 124 ITPEAFKKLYRLLRRG----------DAFSVTGRPHRTGRG-ELTVVATELPQLLSPCLH 172

Query: 112 -LPVFGERE----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
            +P+  +      YP  ++F      L   T    I  R+ II  +R   +  +F+E +T
Sbjct: 173 DVPLDAKEHENSPYPRHVQF------LADQTTTDIIKARSAIIQYLRQFFLDRSFMEVNT 226

Query: 167 PILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           PI+ + +    AR F   +        +L  AP+ + + L+  GFDR F+I P FR+E  
Sbjct: 227 PIVNSIAGGAIARPFYTSATEFPDRQLSLRIAPELWLKRLVVGGFDRVFEIGPSFRNEGI 286

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT----------VSNNFL 275
                P EF   +   ++   +D+L+  E++L G+ +   + N            S  F 
Sbjct: 287 DKTHNP-EFTTCEFYHAYANLEDLLSMTESLLSGMAQHIRDTNKDGTLKPTEVDFSTPFR 345

Query: 276 RICYDDAI-RRYGTDKPDLRNPIIMHNVTEHF 306
           RI +   I  + G   PDL +P  +  V + F
Sbjct: 346 RIDFLTGIEEKIGRKLPDLTSPDAVAQVKQLF 377


>gi|254977178|ref|ZP_05273650.1| lysyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255094508|ref|ZP_05323986.1| lysyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255102764|ref|ZP_05331741.1| lysyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255308585|ref|ZP_05352756.1| lysyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|255316259|ref|ZP_05357842.1| lysyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518920|ref|ZP_05386596.1| lysyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255652099|ref|ZP_05399001.1| lysyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260685072|ref|YP_003216357.1| lysyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260688730|ref|YP_003219864.1| lysyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306521833|ref|ZP_07408180.1| lysyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|260211235|emb|CBA66755.1| lysyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260214747|emb|CBE07437.1| lysyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 509

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 138/305 (45%), Gaps = 36/305 (11%)

Query: 3   RY-RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           RY RTH   D+     S  G   +++G +   R  G   F+DI+D  G  Q     D A 
Sbjct: 43  RYDRTHYSMDIKDNFDSLEGKTTKIAGRIMSKRIQGKAGFIDIQDQEGRIQSYVRLD-AI 101

Query: 59  FEIAKSVRSEW----VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP 113
            E   SV S +    ++ I+G +              G+I + A+ + +L  + + LP  
Sbjct: 102 GEEEYSVFSTYDIGDIVGIEGEIFKTKK---------GEISVKAKSVVLLCKSLQVLPEK 152

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TA 171
             G ++  + +R++ R++DL  +   KN  + RT+ + ++R  +    F+E  TPIL T 
Sbjct: 153 YHGLKD--QELRYRQRYVDLIVNPEVKNAFLIRTKALKALRAYLDDRGFLEVETPILNTI 210

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F+          Y L  A + Y + L+  GFD+ +++   FR+E       P
Sbjct: 211 AGGANARPFITNHNTLHIPMY-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDLKHNP 269

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN------NFL----RICYDD 281
            E+  +++  ++ +  D++   ENV+     E + G+ + N      NF     R+  +D
Sbjct: 270 -EYTAIELYQAYADYTDMMEITENVI-AHMAEVATGSMIVNYQGTEINFTPPWKRMSMED 327

Query: 282 AIRRY 286
            ++ Y
Sbjct: 328 CVKEY 332



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + G+PP GG+  GIDR++MLL  + ++R+V LFP
Sbjct: 458 KALEVGLPPTGGLGIGIDRVIMLLTNSPSIRDVLLFP 494


>gi|217962040|ref|YP_002340610.1| asparaginyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229141286|ref|ZP_04269824.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|217068277|gb|ACJ82527.1| asparaginyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228642067|gb|EEK98360.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 463

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 130/327 (39%), Gaps = 61/327 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V   
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             ++++  A+           E+ A+KI+I  +++    P+  +R   E +R       L
Sbjct: 77  GKVIVTPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T   +   R R I +       +   F+   TPI+T S  EGA +     RV     
Sbjct: 125 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 181

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             +P+                       Q      A  F   +   P FR E+  + R  
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270
            EF+ ++ E++F E  D++N  E++L+ V +          EF N            N +
Sbjct: 242 AEFWMVEPEIAFAELGDVMNLTEDMLKYVMKYVLEHAPEEMEFFNSFVDKTVLERMNNVI 301

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F RI Y +AI+       D + P+
Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328


>gi|77918852|ref|YP_356667.1| lysyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|77544935|gb|ABA88497.1| lysyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 494

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 136/292 (46%), Gaps = 20/292 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            + ++     L+G +   R  G   F+ I+D +G  QV    D+   E  +  R   +  
Sbjct: 50  ALENINHHYALAGRMMARRDFGKAAFIQIQDRHGRLQVFVRRDNVGEEAFQMFRKLDIGD 109

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G V  +   T      T ++ L A  + +L+ + + PLP          +R++ R+LD
Sbjct: 110 IVG-VTGKPFRTK-----TNELSLRADSLRLLTKSLQ-PLPEKWHGLTDVEMRYRQRYLD 162

Query: 133 LRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGS 190
           L  +   + I K R++I++ +R  M+  +F+E  TP++   +    AR F+      +  
Sbjct: 163 LIVNPDVQEIFKKRSQIVSLIRNFMVDNDFLEVETPMMQPVAGGATARPFMTHHNTLKMD 222

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L  AP+ Y + L+  GF+R F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 223 LF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGISIQHNP-EFTMMEFYQAYANYEDLM 280

Query: 251 NTMENVLRGVFEE------FSNGN---TVSNNFLRICYDDAIRRYGTDKPDL 293
           +  E ++  V E+      F+ G     ++  + R+   +AI +YG  +P++
Sbjct: 281 DFTEKLICHVAEKVVGSLTFTYGGREVDLTAPWDRLTVKEAILKYGDVEPEV 332



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VMLL  A ++REV LFP
Sbjct: 451 RALEYGLPPTAGEGIGIDRLVMLLTDAASIREVILFP 487


>gi|332523638|ref|ZP_08399890.1| asparagine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314902|gb|EGJ27887.1| asparagine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 448

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  + +  WV      G + FL +RD     Q VA  P+          +  F++ K +
Sbjct: 15  VGQEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKFGEEEGAKKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  + + P+     +E+     
Sbjct: 75  SQETSVRVTGVVKEDQRSKFG-------YELDVTDLEVIGESVDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II S         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAIMQIRNAIIYSTYEFFDQNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  D  L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLNHDQSLDLQEAYVKALIQGVIDRAPQALEILERDVEALKRYITEPFKRVSYDDAI 295


>gi|269140267|ref|YP_003296968.1| lysyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267985928|gb|ACY85757.1| lysyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304560095|gb|ADM42759.1| Lysyl-tRNA synthetase class II [Edwardsiella tarda FL6-60]
          Length = 505

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 142/339 (41%), Gaps = 31/339 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D    ++      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDMGGRIQLYVARDDLKDDVYSEQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +    I +L+ A   PLP        +  R++ R+LDL   ++  
Sbjct: 125 RGTLFRTQ--TGELSIHCHSIHLLTKALR-PLPDKFHGLSDQETRYRQRYLDLIANESSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +    R++I+ ++R  M+ + F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 ETFRTRSKILAAIRNFMVNKGFMEVETPMMQVI-PGGASARPFITHHNALDIDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E + 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELF 298

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
           R          T+S + L      ++ +YG    D   P I  ++ E   H    + S  
Sbjct: 299 R----------TISQDVL----GSSVVQYGDQTFDFGKPFIKMSMKEAICHYRPDIASAD 344

Query: 318 L-----SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           L     +      +     K  G  R  C+  +E A SQ
Sbjct: 345 LDDMEKACKIAESLGIKIEKSWGLGRVQCEIFDETAESQ 383



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGVGIDRMMMLFTNSHTIRDVILFP 499


>gi|240047394|ref|YP_002960782.1| asparaginyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239984966|emb|CAT04959.1| Asparaginyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 447

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 20/273 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           +++ GWV  +R +  I F++I D   I   Q V   D   FE   ++     + + G V 
Sbjct: 18  LKIKGWVTNIRGNLNIKFVEINDGSSIVNLQCVLKKDKIDFEKISNLSLGSAIEVSG-VF 76

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDT 137
             + E   +       EL   KI+ILS+++    P+   +    ++ F  +   +R R  
Sbjct: 77  KYTPERQQSG------ELIVDKIDILSLSDVNEFPI---QNKETTVEFLRQIPHIRHRTK 127

Query: 138 LHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVNQGSFYALP 195
           L + +++ R+ +   +      E F+  S PILT++  EGA + FLV     +G F+   
Sbjct: 128 LFRAVMRLRSALFFEINSFFENEGFLNFSAPILTSNDGEGAGETFLVDDE--KGGFFNKK 185

Query: 196 QAPQQYKQLLMAS---GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                  QL   S   GF + +  AP FR E   + +   EF+ ++ E++F    DI+  
Sbjct: 186 TTLGVTGQLHAESYALGFGKVYTFAPTFRAEKSNTKKHAAEFWMVEPEVAFFNLQDIIGL 245

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            + +L+ V +     N    +FL       IR+
Sbjct: 246 GDKMLKFVIKNVLEKNKDEFDFLEKYLGIKIRQ 278


>gi|158288989|ref|XP_310792.4| AGAP000325-PA [Anopheles gambiae str. PEST]
 gi|157018837|gb|EAA06178.4| AGAP000325-PA [Anopheles gambiae str. PEST]
          Length = 616

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 120/250 (48%), Gaps = 24/250 (9%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G VH +R  G  +IF D+R      QV+AN        AK+  SE +   +   + 
Sbjct: 144 VSVAGRVHAIRESGVKLIFFDLRGEGLKLQVMAN--------AKAYESEQLFFEETARLR 195

Query: 80  RS----AETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLR 134
           R        +      G++   A++I++LS     LP   +G ++  +  RF+ R+LDL 
Sbjct: 196 RGDIIGVTGVPGKTKKGELSAMARRIKLLSPCLHMLPHLHYGLKD--KETRFRQRYLDLI 253

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP-SRVNQGS 190
            +   +NI V R  II+ +R       F+E  TP++    P GA  + F+   + +N   
Sbjct: 254 LNNNVRNIFVTRALIISYVRRFFDNLGFLEVETPMMNMI-PGGATAKPFITHHNDLNMDL 312

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  +  AP+ Y ++L   G DR ++I   FR+E       P EF   +  M++ + +DI+
Sbjct: 313 FLRI--APELYLKMLTVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYNDII 369

Query: 251 NTMENVLRGV 260
           +  + +L G+
Sbjct: 370 DITQQLLSGM 379



 Score = 43.9 bits (102), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 554 ALEYGLPPTGGWGMGIDRLTMFLTDSNNIKEVLLFP 589


>gi|58267156|ref|XP_570734.1| asparagine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57226968|gb|AAW43427.1| asparagine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 600

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 125/312 (40%), Gaps = 36/312 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  VRL GWVHR RP     F+ +RD  G  Q +   D      A  +  E  + + G+
Sbjct: 174 VGKRVRLQGWVHRFRPQKTNFFVVLRDGSGFLQCILTGDCIRTVDALDLSLECTIEVVGI 233

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----REYPE---SIRFKYR 129
           V     +        G +EL+    +I+  A     P   E    R  P+   SIR   R
Sbjct: 234 V----EKVKEGQTAPGGVELAVDYWKIIGRA-----PTGAEALESRLQPDTEASIRADLR 284

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L+LR +     +  R  ++ + R         E + P +  +S EG            G
Sbjct: 285 HLELRGEIASSVMRFRALLLRAFRESFNKRRITEVTPPCMVQTSVEGGSTLFEFDYY--G 342

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           S   L Q+ Q Y + ++ S  D Y  I   FR E   + R   E+  L+ E+ F++  D+
Sbjct: 343 SKAYLTQSSQLYLETVLPSLGDVYC-IQESFRAEKSLTRRHLSEYTHLEAELVFIKFKDL 401

Query: 250 LNTMENVLRGVFEEFSNGNTVSN--------------NFLRICYDDAI---RRYGTDKPD 292
           L+ +E+++  V +        S                F+R+ Y DAI     +G  + D
Sbjct: 402 LDHLEDMICEVIDVLLADPVASEIIKTLNPEFVPPQRPFVRLDYRDAITYLNEHGIKRED 461

Query: 293 LRNPIIMHNVTE 304
             + ++  ++ E
Sbjct: 462 GEDHVVGDDIAE 473


>gi|238921195|ref|YP_002934710.1| lysyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259511526|sp|C5BAR6|SYK_EDWI9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238870764|gb|ACR70475.1| lysyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 505

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 142/339 (41%), Gaps = 31/339 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D    ++      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDMGGRIQLYVARDDLKDDVYSEQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +    I +L+ A   PLP        +  R++ R+LDL   ++  
Sbjct: 125 RGTLFRTQ--TGELSIHCHSIHLLTKALR-PLPDKFHGLSDQETRYRQRYLDLIANESSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +    R++I+ ++R  M+ + F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 ETFRTRSKILAAIRNFMVNKGFMEVETPMMQVI-PGGASARPFITHHNALDIDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E + 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELF 298

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
           R          T+S + L      ++ +YG    D   P I  ++ E   H    + S  
Sbjct: 299 R----------TISQDVL----GSSVVQYGDQTFDFGKPFIKMSMKEAICHYRPDIASAD 344

Query: 318 L-----SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           L     +      +     K  G  R  C+  +E A SQ
Sbjct: 345 LDDMDKACKIAESLGIKIEKSWGLGRVQCEIFDETAESQ 383



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGVGIDRMMMLFTNSHTIRDVILFP 499


>gi|222152793|ref|YP_002561970.1| asparaginyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|222113606|emb|CAR41467.1| asparaginyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 448

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  + +  WV      G + FL +RD     Q VA  P+          +  F+  K +
Sbjct: 15  VGEEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKFGEEVGAEKFDTIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  + E P+     +E+     
Sbjct: 75  SQETSVKVSGIVKEDDRSKFG-------YELDITDLEVIGESVEYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAIMQIRNAIIYATYEFFDQNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  D+ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLNHDESLDLQEAYVKALIQGVIDRAPQALEILERDVDALKRYIAEPFKRVSYDDAI 295



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    E +      +G+ K   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDDYEALSAKMDALGMDKS--EYEFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|295658716|ref|XP_002789918.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226282879|gb|EEH38445.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 633

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 126/253 (49%), Gaps = 11/253 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           VR++G ++  R  G  +IF D+R      QV     +A  +++   + E +   D + V+
Sbjct: 128 VRIAGRIYTKRSAGAKLIFYDVRAEGVKIQVACQAQNAEGDVSFEAQHEHLRRGDIIGVV 187

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A+++ +L+    ++P   +G R+  +  R++ R+LDL  + 
Sbjct: 188 GWPGRTAPKNRADGELSIFAKEVILLAPCLHQIPSEHYGLRD--QEQRYRQRYLDLIMND 245

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194
             +N+ + R+++I  +R      +F+E  TP++ + +    A+ F+   + +N   F  +
Sbjct: 246 KSRNVFITRSKMITYIRRFFDERDFVEVETPMMNSIAGGATAKPFITHHNDLNMDMFMRV 305

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  E
Sbjct: 306 --APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNVTE 362

Query: 255 NVLRGVFEEFSNG 267
            ++ G+ +  + G
Sbjct: 363 ELVSGLVKHITGG 375



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576


>gi|195345035|ref|XP_002039081.1| GM17026 [Drosophila sechellia]
 gi|194134211|gb|EDW55727.1| GM17026 [Drosophila sechellia]
          Length = 558

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 116/295 (39%), Gaps = 39/295 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G ++  S V++ GWVHR+R  G  +IF+ +RD  G  Q V N D  C             
Sbjct: 130 GTANRDSRVKVYGWVHRLRRQGKSLIFITLRDGTGFLQCVLN-DQLC------------Q 176

Query: 72  CIDGLVMSRSAETI---------NANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             D L +S  +  +               G  EL+    E++  A           E   
Sbjct: 177 TYDALTLSTESSVVLFGTLKLVPEGKTAPGGHELNVDYWELIGSAPPGGADAILNEEAQP 236

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++   R + +R +   K +  R+ +  + R    A  + E + P L  +  EG      
Sbjct: 237 DVQLDNRHIMIRGENTSKVLKMRSVVTQAFRAHYEARGYNEVTPPTLVQTQVEGGSTLFK 296

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                + ++  L Q+ Q Y +  + +  D  F I+  +R E  R+ R   E+  ++ E S
Sbjct: 297 LKYFGEEAY--LTQSSQLYLETCLPALGD-VFTISQSYRAEQSRTRRHLAEYSHVEAECS 353

Query: 243 FVEQDDILNTMENVLRGVFEEFSNG-------------NTVSNNFLRICYDDAIR 284
           F+  D++L+ +E+++  V +                        F R+ Y+DAI+
Sbjct: 354 FLTFDELLDRLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRRMNYEDAIK 408



 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R + SE +L+ ++  GI  +     +    R +  G  PHGG   G+
Sbjct: 475 LLPNVGEIVGGSMRIYDSEELLKGYAREGIDPQPY--YWYTDQRVY--GTMPHGGYGLGL 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  LL   ++REV L+P   + C
Sbjct: 531 ERFLCWLLNRYHIREVCLYPRFLDRC 556


>gi|255522650|ref|ZP_05389887.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
          Length = 429

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 149/345 (43%), Gaps = 43/345 (12%)

Query: 31  RPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANII 90
           R  G + F  I+D +   Q+    D+    I +   + + L   G ++         N  
Sbjct: 4   RVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKLADLGDIIGIKGTIFRTN-- 57

Query: 91  TGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRI 148
           TG++ + A +  +LS +   LP    G ++  +  R++ R+LDL  +   +N  V R++I
Sbjct: 58  TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEESQNRFVMRSKI 115

Query: 149 INSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           +   R  M  + F+E  TP+L T +    A+ F+          Y L  A + + + L+ 
Sbjct: 116 LKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIALELHLKRLIV 174

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++ +E ++  V ++  NG
Sbjct: 175 GGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLVSTVCKQV-NG 232

Query: 268 NT----------VSNNFLRICYDDAIRRY-------GTDKPDLRNPIIMHN--VTEHFVH 308
            T          ++ N+ RI   DA++ Y        T   + R     HN  VTEH  +
Sbjct: 233 TTEITYGEYNVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEARELAKKHNVPVTEHMTY 292

Query: 309 SE-----FRVFSKILSVNP----GYEVWAIP-AKGGGGNRAFCDR 343
                  F  + +   + P    G+ V   P AK    +  F DR
Sbjct: 293 GHILNEFFETYVEEKLIQPTFVYGHPVEISPLAKKNKEDDRFTDR 337



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG+  GIDR+VMLL  A ++R++ LFP  ++
Sbjct: 388 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 427


>gi|206578828|ref|YP_002236653.1| lysyl-tRNA synthetase LysS [Klebsiella pneumoniae 342]
 gi|288933630|ref|YP_003437689.1| lysyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|290511304|ref|ZP_06550673.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|206567886|gb|ACI09662.1| lysyl-tRNA synthetase LysS [Klebsiella pneumoniae 342]
 gi|288888359|gb|ADC56677.1| lysyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|289776297|gb|EFD84296.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 505

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 132/290 (45%), Gaps = 25/290 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G +++ 
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGVYNDQFKKWDL---GDIIAA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 RGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  K R++I+  +R  M+   F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 NTFKVRSQILAGIRQFMVGRGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298

Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY--GTDKPDLRN 295
           R + ++   GNT              F ++   +AI++Y   T+  DL N
Sbjct: 299 RTLAQDIL-GNTEVPYGDQVFDFGKPFEKLTMREAIKKYRPETEMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|134111763|ref|XP_775417.1| hypothetical protein CNBE1330 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258076|gb|EAL20770.1| hypothetical protein CNBE1330 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 600

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 125/312 (40%), Gaps = 36/312 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  VRL GWVHR RP     F+ +RD  G  Q +   D      A  +  E  + + G+
Sbjct: 174 VGKRVRLQGWVHRFRPQKTNFFVVLRDGSGFLQCILTGDCIRTVDALDLSLECTIEVVGI 233

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----REYPE---SIRFKYR 129
           V     +        G +EL+    +I+  A     P   E    R  P+   SIR   R
Sbjct: 234 V----EKVKEGQTAPGGVELAVDYWKIIGRA-----PTGAEALESRLQPDTEASIRADLR 284

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L+LR +     +  R  ++ + R         E + P +  +S EG            G
Sbjct: 285 HLELRGEIASSVMRFRALLLRAFRESFNKRRITEVTPPCMVQTSVEGGSTLF--EFDYYG 342

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           S   L Q+ Q Y + ++ S  D Y  I   FR E   + R   E+  L+ E+ F++  D+
Sbjct: 343 SKAYLTQSSQLYLETVLPSLGDVYC-IQESFRAEKSLTRRHLSEYTHLEAELVFIKFKDL 401

Query: 250 LNTMENVLRGVFEEFSNGNTVSN--------------NFLRICYDDAI---RRYGTDKPD 292
           L+ +E+++  V +        S                F+R+ Y DAI     +G  + D
Sbjct: 402 LDHLEDMICEVIDVLLADPVASEIIKTLNPEFVPPQRPFVRLDYRDAITYLNEHGIKRED 461

Query: 293 LRNPIIMHNVTE 304
             + ++  ++ E
Sbjct: 462 GEDHVVGDDIAE 473


>gi|293364076|ref|ZP_06610812.1| asparagine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552566|gb|EFF41340.1| asparagine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 451

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 113/245 (46%), Gaps = 16/245 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           L GWV   R +  + F+++ D   +   Q+V    +  FE+   ++    + + G +++ 
Sbjct: 22  LEGWVDSNRGNNKLRFINLNDGSTVKSLQIVIKGTNFDFELLDQIKIGASIKVTGKIVAT 81

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                        IEL A +I++L   +    P+  +    E++R +   +  R  TL  
Sbjct: 82  PGSK-------QPIELVASQIQLLKNTDN-DYPIQNQEINVETLR-EIPHIRHRTKTLKS 132

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ- 199
            ++ R+ +   +    IA ++   ++PI+T++  EGA +    S  ++  F+ L +    
Sbjct: 133 AMLIRSVLAQEIHKYFIAHDYFLMASPIITSNDGEGAGETFNVSDDSKEPFFGLNKKATL 192

Query: 200 ----QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
               Q      A GF + +  AP FR E   + +   EF+ ++ E++F + +D++N  ++
Sbjct: 193 GVTGQLHAESYAIGFKKVYTFAPTFRAEHSNTKKHAAEFWMVEPEIAFYKLNDVVNLADH 252

Query: 256 VLRGV 260
           +L+ V
Sbjct: 253 MLKTV 257


>gi|119509340|ref|ZP_01628489.1| asparaginyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119465954|gb|EAW46842.1| asparaginyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 463

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 125/306 (40%), Gaps = 55/306 (17%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLVMS 79
           + GWV   R   G  F+++ D   +   Q V N D   +E I K + +   + + G++++
Sbjct: 21  IQGWVRTKRELKGFAFIEVNDGSSLANLQAVINQDLPDYEEIIKKLNTGAAVEVSGVLVA 80

Query: 80  RSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
              +        GQ IEL AQ +++   A+    P+  +R    S  F      LR  T 
Sbjct: 81  SQGK--------GQRIELQAQAVKVYGEADPETYPLQKKRH---SFEFLRTIGHLRSRTN 129

Query: 139 HKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSRVN 187
               V R R   S       +   F+   TPI+TA+  EGA +           +P   +
Sbjct: 130 SFGAVFRVRNACSAAIHEFFQQRGFLWVHTPIITANDCEGAGELFSVTGLDLKNIPRTKS 189

Query: 188 QG-----SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +       F+  P       QL   +MA  F   +  AP FR E+  + R   EF+ ++ 
Sbjct: 190 EAVDYTQDFFGKPTYLTVSGQLEAEVMAMAFSNVYTFAPTFRAENSNTSRHLAEFWMVEP 249

Query: 240 EMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRIC 278
           EM+F + +  ++  E  L+ VF+          EF N            N ++N F R+ 
Sbjct: 250 EMAFCDLEGNMDLAEAFLKHVFKYVLEKCPEDMEFFNQRIDKTVLETADNIINNQFERLT 309

Query: 279 YDDAIR 284
           Y +A++
Sbjct: 310 YTEAVK 315


>gi|146318268|ref|YP_001197980.1| asparaginyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|166232742|sp|A4VTZ1|SYN_STRSY RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|145689074|gb|ABP89580.1| Aspartyl/asparaginyl-tRNA synthetase [Streptococcus suis 05ZYH33]
          Length = 508

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 117/295 (39%), Gaps = 42/295 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G + FL +RD     Q VA  P+          +  F++AK +
Sbjct: 15  VGQEVTIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKFGEEAGTEKFDVAKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  +++ P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKFG-------YELDVTDLEVIGESQDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR          R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             Q ++  L Q+ Q Y +   MA G  R F   P FR E  ++ R   EF+ +D E SF+
Sbjct: 185 FGQLAY--LSQSGQLYLEAGAMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFL 240

Query: 245 EQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
             ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 241 SHEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRYIAEPFKRVAYDDAI 295



 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ K   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDNYDALVAKMDELGMDKS--EYEFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|146689|gb|AAA24096.1| lysyl-tRNA synthetase (lysU) (E.C. 6.1.1.6) [Escherichia coli]
          Length = 501

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 131/293 (44%), Gaps = 35/293 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L         
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL--------- 118

Query: 81  SAETINANII----TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
             + I A  +    TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   
Sbjct: 119 -GDIIGAGTLFKTQTGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIAN 176

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
           D   +  V R++I+ ++R  M+A  F+E  TP++    P G  AR F+          YA
Sbjct: 177 DKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQV-IPGGASARPFITHHNALDLDMYA 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
              AP+ Y + L+  GF+R F+     R+E  R  R   EF  +++ M++ +  D++   
Sbjct: 236 RI-APELYLKRLVVGGFERVFE--HVTRNEGIR--RHNPEFTMMELYMAYADYHDLIELT 290

Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY--GTDKPDLRN 295
           E++ R + +E      V+           F ++   +AI++Y   TD  DL N
Sbjct: 291 ESLFRTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDN 343



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 460 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 495


>gi|153815948|ref|ZP_01968616.1| hypothetical protein RUMTOR_02193 [Ruminococcus torques ATCC 27756]
 gi|145846767|gb|EDK23685.1| hypothetical protein RUMTOR_02193 [Ruminococcus torques ATCC 27756]
          Length = 576

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 125/273 (45%), Gaps = 30/273 (10%)

Query: 31  RPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANII 90
           R  G   F +++D  G  Q     DS   E  K  +   V    G V+    E       
Sbjct: 5   RVMGKASFCNVQDLKGNIQSYVARDSIGEENYKEFKKLDV----GDVIGIEGEVFKTK-- 58

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRII 149
           TG+I + A  + +LS + ++ LP          +R++ R++DL  +   K+  +KR++II
Sbjct: 59  TGEISIHASHVTLLSKSLQI-LPEKFHGLTNTDMRYRQRYVDLIMNPEAKDTFIKRSKII 117

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ------APQQYKQ 203
           +++R  +  E F+E  TP+L A++   A      +R  +  F AL +      + + Y +
Sbjct: 118 SAIRRYLDGEGFMEVETPMLVANAGGAA------ARPFETHFNALNEDLKLRISLELYLK 171

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            L+  G +R ++I   FR+E   +   P EF  +++  ++ + + +++  EN+ R V +E
Sbjct: 172 RLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMMDLTENLYRHVAQE 230

Query: 264 FSNGNTVSNN---------FLRICYDDAIRRYG 287
                 +  N         F RI   DA+++Y 
Sbjct: 231 VLGTTKIVYNGVEMDLGKPFERITMVDAVKKYA 263



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+ MLL  +  +R+V LFP
Sbjct: 389 ALEIGMPPTGGIGFGIDRMCMLLTNSAAIRDVLLFP 424


>gi|194336791|ref|YP_002018585.1| lysyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|238693364|sp|B4SB22|SYK_PELPB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|194309268|gb|ACF43968.1| lysyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 511

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 136/311 (43%), Gaps = 36/311 (11%)

Query: 2   HRYRTHSCGDL---GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           H   THS G++    V +  + V ++G +  +R  G   F  ++D  G  Q+    D   
Sbjct: 45  HFEVTHSSGEIIANFVEEAKTPVSVAGRIMTIRKMGKASFFHLQDSAGRIQIYMKKD--- 101

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E+  +    + L   G ++     T      TG+I + A+ +E+L+ +   P+PV  E+
Sbjct: 102 -EVGDATYDTFKLLDIGDIIGIKGFTFKTR--TGEISVHAESLELLTKSLR-PIPVAKEK 157

Query: 119 EYP-----------ESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECST 166
           E             + +R++ R++DL  +  + +  +KR+ I++ MR     + ++E  T
Sbjct: 158 EVDGEKVVFDAFSDKELRYRQRYVDLIVNPEVKETFIKRSAIVSFMRNAFTGKGWLEVET 217

Query: 167 PILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           PIL        AR F           Y L  A + Y + L+  GFD  F+ A  FR+E  
Sbjct: 218 PILQPIYGGAAARPFTTHHNALDMQLY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEG- 275

Query: 226 RSDRLPG-EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------GNTVSNN--FL 275
             DR    EF Q+++ +++ + + ++  +E +        +        GN +S    F 
Sbjct: 276 -IDRFHNPEFTQVELYVAYKDYNWMMEMVEELFSQTALAVNKSEVTTFLGNEISLKPPFR 334

Query: 276 RICYDDAIRRY 286
           R+   DAI  Y
Sbjct: 335 RLSIIDAITEY 345



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  GI  GIDR+VM+L G  ++REV  FP
Sbjct: 470 RAIEYGMPPCAGIGIGIDRLVMILTGQDSIREVIFFP 506


>gi|328952686|ref|YP_004370020.1| Asparaginyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328453010|gb|AEB08839.1| Asparaginyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 436

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 95/247 (38%), Gaps = 15/247 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V L GW++  R  G + FL +RD  G+ Q   V        F     +  E  L +
Sbjct: 18  VGQEVSLRGWLYNKRSSGKVRFLILRDGTGLVQGVMVKGKLPETDFTAFDRLTQESSLSL 77

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           +G+V              G  EL    +  L VA E P+     +E+       +R L L
Sbjct: 78  EGVVRVEPR-------APGGYELEVTAVHPLHVASEYPI---SHKEHGVDFLLNHRHLWL 127

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  II + R       F+   TPI T ++ EG               Y 
Sbjct: 128 RSPRQQAVLRVRDEIIRACRDFFADRRFVLVDTPIFTPTACEGTTTLFETDYFGDRKAYL 187

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                   +   +A G  R +   P FR E  ++ R   EF+ L+ E++F + +DI+   
Sbjct: 188 TQSGQLYLEAAALALG--RVYCFGPTFRAEKSKTRRHLTEFWMLETEVAFADLEDIMALA 245

Query: 254 ENVLRGV 260
           E +L  V
Sbjct: 246 EALLCAV 252


>gi|27363989|ref|NP_759517.1| lysyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|320157368|ref|YP_004189747.1| lysyl-tRNA synthetase (class II) [Vibrio vulnificus MO6-24/O]
 gi|31340442|sp|Q8DEQ9|SYK_VIBVU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|27360106|gb|AAO09044.1| lysyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|319932680|gb|ADV87544.1| lysyl-tRNA synthetase (class II) [Vibrio vulnificus MO6-24/O]
          Length = 510

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 118/243 (48%), Gaps = 25/243 (10%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150
           G + ++ ++ E+L+ A   PLP        + +R++ R++DL  +   +N  V R+++++
Sbjct: 133 GDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFVVRSKVMS 191

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 192 AIRNFMISKQFMEVETPMMHVI-PGGASARPFVTHHNALDMPMY-LRIAPELYLKRLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V  E     
Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGST 308

Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEF 311
           ++            + R+   +AI+ Y  D        + D++N  +M ++ +  VH E 
Sbjct: 309 SMPYGEHTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKS-VHVEV 367

Query: 312 RVF 314
             F
Sbjct: 368 EPF 370



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 469 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504


>gi|316976293|gb|EFV59613.1| lysyl-tRNA synthetase [Trichinella spiralis]
          Length = 531

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 132/275 (48%), Gaps = 29/275 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP----- 54
           + +Y +  C ++    +   VR++G +H  R  G  +IF D+R      Q++AN      
Sbjct: 98  IEKYNSVKCEEV----LNETVRVAGRIHSKREAGQKLIFYDLRAEGTRLQIMANGKFYKT 153

Query: 55  -DSACFEIAKSVR-SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
            ++    I ++VR  + V CI     ++  E    +II  ++ L    + +L      P 
Sbjct: 154 GEAEFLRINEAVRRGDIVGCIGHPSRTKKGEL---SIIPTELVLLTPCLHML------PH 204

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA 171
             +G +   +  R++ R+LDL  +   +NI ++R++I+N +R  + +  F+E  TP++  
Sbjct: 205 LHYGLKN--QETRYRMRYLDLIINNNVRNIFIRRSQILNYIRKYLDSIGFLEVETPMMNM 262

Query: 172 SSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             P GA  + F+          Y +  AP+ Y ++L+  G DR ++I   FR+E      
Sbjct: 263 I-PGGATAKPFVTHHNELDRDLY-MRVAPELYLKMLIVGGIDRVYEIGRNFRNEGIDLTH 320

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
            P EF   +  M++ + +D++   E++L G+ +  
Sbjct: 321 NP-EFTMCEFYMAYADYNDLMKITEDLLSGMVKHL 354



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ MLL    N++EV LFP
Sbjct: 481 ALEHGLPPTAGWGMGIDRLTMLLTDQNNIKEVLLFP 516


>gi|299135981|ref|ZP_07029165.1| asparaginyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298602105|gb|EFI58259.1| asparaginyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 449

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 118/287 (41%), Gaps = 33/287 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA----CFEIAKSVRSEWVLCI 73
           G  + L GW++ +R  G ++F   RD  G  Q +  P +A     FE  K++  E  + +
Sbjct: 21  GQTITLRGWLYNLRSSGKLLFPTFRDGSGTIQGIV-PKAAVAEEVFETLKNLTLESSVVV 79

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132
            G V + S             EL  + + +   +A+E P P+   +E+      ++R L 
Sbjct: 80  TGKVRADSR-------APSGFELDVENVTVTQRIADETPYPI-SLKEHGVDFLMEHRHLW 131

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       +  R  I+ +         FI    PILT ++ EG  +       +    Y
Sbjct: 132 LRTPRQSAILRVRATIMRAAAEYFDTNGFIRTDPPILTPNACEGTSELFEMDYFDDDKAY 191

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD---- 248
            L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E+++++ D     
Sbjct: 192 -LTQSGQLYIE-ATALALGKVYSFGPTFRAEKSKTRRHLTEFWMIEPEVTYLDLDGLMGL 249

Query: 249 -----------ILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDA 282
                      +L T    L+ + +E S    V+    F R+ YD+A
Sbjct: 250 AEGFLTHIVTRVLETHRADLKVIGKEVSKLEAVAAPGEFPRLSYDEA 296


>gi|49619039|gb|AAT68104.1| lysyl-tRNA synthetase [Danio rerio]
          Length = 577

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 127/281 (45%), Gaps = 27/281 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP----- 54
           + RY     GD  ++DV   + LSG VH  R  G  ++F D+R      QV+AN      
Sbjct: 97  IERYNHLQPGD-HLTDV--VLNLSGRVHAKRASGAKLLFYDLRGEGVKLQVMANSRNYTS 153

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLP 113
           + A   I   +R   ++ + G                G++ +   ++ +LS     LP  
Sbjct: 154 EEAFVHINNKLRRGDIIGVRG---------NPGKTKKGELSIIPVEMTLLSPCLHMLPHL 204

Query: 114 VFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
            FG ++  +  RF+ R+LDL   D + +  V R++II  +R  +    F+E  TP++   
Sbjct: 205 HFGLKD--KETRFRQRYLDLILNDFVRQKFVTRSKIITYLRSFLDQLGFLEIETPMMNLI 262

Query: 173 SPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            P GA  + F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       
Sbjct: 263 -PGGAVAKPFITYHNDLNMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHN 320

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           P EF   +  M++ +  D++   E +L G+ +  +    V+
Sbjct: 321 P-EFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGAYKVT 360



 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 524 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 559


>gi|332376021|gb|AEE63151.1| unknown [Dendroctonus ponderosae]
          Length = 552

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 118/277 (42%), Gaps = 21/277 (7%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V+L+GWVHR+R  G  ++F+ +RD  G  Q + +        A  +++E  + + G +  
Sbjct: 132 VKLNGWVHRLRRQGKNLMFITLRDGSGFLQCILSNQLCSTYNALVLQTESTVLLFGTL-- 189

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
              +        G  EL     E++ +A           E    ++ + R + +R +   
Sbjct: 190 --KQVPEGKTAPGGHELHVDYWELIGLAPPGGADSLLNEEALPDVQAENRHIMIRGENTS 247

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           K +  R+ ++ + R   +   + E + P +  +  EG           + ++  L Q+ Q
Sbjct: 248 KVLRMRSVLLQAFRDHYLDRGYCEVTPPSIVQTQVEGGSTLFKLDYFGEEAY--LTQSSQ 305

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN---- 255
            Y +  + S  D Y  IA  FR E  R+ R   E+  ++ E  F+  +D+L+ +E+    
Sbjct: 306 LYLETCLPSMGDVYC-IAESFRAEQSRTRRHLAEYTHVEAECPFISFNDLLDRLEDLICD 364

Query: 256 ----VLRGVFEEF-----SNGNTVSNNFLRICYDDAI 283
               VL+  + E       N    +  F+R+ Y DAI
Sbjct: 365 VVDRVLKSPYGEIVRELNPNFQVPTRPFMRMNYSDAI 401



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 469 LLPNVGEIVGGSMRIWDSEELLEGYKREGIDPAP----YFWYTDQRKYGTCPHGGYGLGL 524

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  LL   ++REV L+P   N C
Sbjct: 525 ERFLCWLLNRYHIREVCLYPRYLNHC 550


>gi|296392770|ref|YP_003657654.1| lysyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296179917|gb|ADG96823.1| lysyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 1091

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 24/256 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKSVRSE 68
           G S  G  VR+SG V R R HGG++F+D+ D  G  QVV      PD       K +   
Sbjct: 656 GRSRSGRQVRVSGRVLRERDHGGVVFVDLSDSSGAAQVVLEERELPDGKLNAFRKEIDLG 715

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ ++       + T  A+++     L+A+ +         PLP           + + 
Sbjct: 716 DLISVE--AAPGVSRTGTASLMARDWRLNAKCLR--------PLPDKRRGLTDPEAKVRL 765

Query: 129 RFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R ++L  +   ++ + KR  ++ ++R ++  E F+E  TP+L      GA      + +N
Sbjct: 766 RHVELMTNPQARDALAKRGAVLRTLREQLWGEGFLEVETPVLQRVH-GGANAEPFRTHIN 824

Query: 188 QGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               Y LP     AP+ Y + L+  G +R F+I   FR+E   +   P EF  L+   + 
Sbjct: 825 A---YDLPLYLRIAPELYLKRLLVGGMERVFEIGRVFRNEGVDATHNP-EFTLLEAYQAH 880

Query: 244 VEQDDILNTMENVLRG 259
            +   + +  E +LR 
Sbjct: 881 SDYRGMRDLTEQMLRA 896



 Score = 44.7 bits (104), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 15/93 (16%)

Query: 481  QYDLVCNGFEIASGGIRNHMSEV--------MLQAFSNVGISKEVVENRFG-GLYRAFQC 531
            ++DLV  G E+A+       SE+         LQA S    S +            A + 
Sbjct: 1001 RWDLVVGGMELATA-----YSELNDPVEQRRRLQAQSEAAASGDPEAMELDEDFLAALEH 1055

Query: 532  GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             MPP GG+  G+DR+VMLL G + +RE   FP+
Sbjct: 1056 AMPPSGGLGVGVDRVVMLLTG-RTIRETLAFPL 1087


>gi|47221098|emb|CAG12792.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 474

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 116/263 (44%), Gaps = 24/263 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69
           L  S  G+ +++ GWV  VR     +FL + D   +   Q++A+ D     +      E 
Sbjct: 32  LSGSKFGANIKVQGWVRSVRSQKKNLFLHVNDGSSLQSLQIIASSDLNNPLLTFGCAVE- 90

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFKY 128
              + G +     +          +EL A +I ++   + +  P    ER   + IR ++
Sbjct: 91  ---VTGFLKPSPHQK-------QPVELEADRIRVVGECDPVDFPFKIKERHGVDYIR-QF 139

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVN 187
             L  R +     +  R+    ++        + +  TP++T++  EGA + F V  +++
Sbjct: 140 PHLRCRTNVFGSLLRVRSEATAAIHSYFQENGYTQIHTPVITSNDCEGAGELFQVEPQIS 199

Query: 188 QG----SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +G    +F+++P       QL   +M+  F   +   P FR E+ +S R   EFY ++ E
Sbjct: 200 EGDANENFFSVPAFLTVSGQLHLEIMSGAFSEVYTFGPTFRAENSQSRRHLAEFYMVEAE 259

Query: 241 MSFVEQ-DDILNTMENVLRGVFE 262
           +SF +  +D+   +E+V R   E
Sbjct: 260 LSFTQSIEDLTEVVEDVFRSATE 282


>gi|15897053|ref|NP_341658.1| lysyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|2501022|sp|P95970|SYK_SULSO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1707804|emb|CAA69561.1| lysyl tRNA synthetase [Sulfolobus solfataricus P2]
 gi|13813220|gb|AAK40448.1| Lysyl-tRNA synthetase (lysS) [Sulfolobus solfataricus P2]
          Length = 494

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 121/267 (45%), Gaps = 13/267 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +  +G V  +R HG   F+DI D     Q+    D    E+ +     ++    G ++  
Sbjct: 56  ISTAGRVANIRRHGKASFVDIFDEGEKLQLYMRVD----ELKEKYDKFFIYVGRGDIIGV 111

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139
             +      + G++ L  +  ++LS A  L  P    +  PE  R+ +R++D L  D   
Sbjct: 112 KGDLFYT--MKGELSLLVKDYQLLSKA--LIEPPDWSKLSPE-FRYAHRYVDFLYNDNAR 166

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYALPQAP 198
           K +  R  II  +R  + ++ FIE  TPI+      GA      + VN     + L  A 
Sbjct: 167 KAMEIRYTIIREIREFLYSKGFIEVETPIVQPVYG-GALAKPFKTHVNYLNEDWYLRIAL 225

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y +  +  GF++ F+I   FR+ED      P EF  L++  ++ + +DI+N  E++L+
Sbjct: 226 ELYLKRYIIGGFNKVFEIGKVFRNEDIDVTHNP-EFTLLELYWAYADYNDIMNLTEDLLK 284

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRR 285
            V ++ +N   +      I ++   +R
Sbjct: 285 SVVKKVTNSTKIVYGKYEIDFEGPFKR 311



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA   GMPP GG+  GIDRIVML+    +++EV  FPM
Sbjct: 447 RALSYGMPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 484


>gi|241667456|ref|ZP_04755034.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254876004|ref|ZP_05248714.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254842025|gb|EET20439.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 560

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 138/308 (44%), Gaps = 27/308 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC 58
           ++Y  +S  +L   +      ++G V   R  G   F+ ++D+ G  QV    ++     
Sbjct: 105 NQYAQYSKQELEELEDKKQYNITGRVVLRRVMGKASFITLQDYSGRIQVYLKKSDLPEGQ 164

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +E  K+      LC  G ++  +      N  TG++ + A   EIL+ A   PLP     
Sbjct: 165 YETFKN------LCDLGDIVGITGTMFKTN--TGELSVEASHFEILTKAIR-PLPDKFHG 215

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++        
Sbjct: 216 LADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDKLDFMEVETPMMHVLQGGAA 275

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F           Y L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  
Sbjct: 276 AKPFKTHHNALDMPLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTM 333

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287
           L+  M++ + +D+++  E++L  + +E      +            + RI   D+I +Y 
Sbjct: 334 LEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYN 393

Query: 288 TD--KPDL 293
            D  K DL
Sbjct: 394 DDITKEDL 401



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VM L  ++++R+V LFP
Sbjct: 519 RALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFP 555


>gi|299820637|ref|ZP_07052526.1| lysine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299817658|gb|EFI84893.1| lysine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 498

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 151/354 (42%), Gaps = 45/354 (12%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G + F  I+D +   Q+    D+    + +   + + L   G ++    
Sbjct: 65  VAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDN----VGEDAYAVFKLADLGDIIGIKG 120

Query: 83  ETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RRDTLHK 140
                N  TG++ + A+   +LS +   LP    G ++  +  R++ R+LDL   D   K
Sbjct: 121 TVFRTN--TGELSVKAEAFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNDESQK 176

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             V R++I+  +R  M  E+++E  TP+L T      A+ F+          Y L  A +
Sbjct: 177 RFVMRSKILRYIREYMDKEDYLEVETPVLHTIPGGAAAKPFITHHNALDMDLY-LRIALE 235

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + L+  G D+ ++I   FR+E   +   P EF  L+   +F   +D++  +E ++  
Sbjct: 236 LHLKRLIVGGMDKVYEIGRVFRNEGISTRHNP-EFTMLESYAAFENYEDVMELVEGLVAY 294

Query: 260 VFEEFSNGNT----------VSNNFLRICYDDAIRRYG-----TDKPDLRNPIIM--HNV 302
           V E+  +G T          ++  + R+   DA++ Y      T K D     +   HNV
Sbjct: 295 VSEKL-HGTTKIQYGEYEVDLTPKWRRLHMADAVKEYAGVDFWTVKTDEEAKALAKEHNV 353

Query: 303 --TEHFVHSE-----FRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343
             TEH  +       F  F +   + P + V+  P      AK    +  F DR
Sbjct: 354 AITEHMTYGHILNEFFETFVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + + G+PP GG+  GIDR+VMLL  A ++R+V LFP  ++
Sbjct: 457 SLEYGLPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPTMKH 496


>gi|229579931|ref|YP_002838330.1| lysyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228010646|gb|ACP46408.1| lysyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
          Length = 492

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 13/267 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +  +G V  +R HG   F+DI D     Q+    D    E+ +     +     G ++  
Sbjct: 54  ISTAGRVANIRRHGKASFVDIFDEGEKLQIYMRVD----ELKEKYDRFFTYVGRGDIIGV 109

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139
             +      + G++ L  +  ++LS A  L  P    +  PE  R+ +R++D L  D   
Sbjct: 110 RGDLFYT--MKGELSLLVKDYQLLSKA--LIEPPDWSKLSPE-FRYAHRYVDFLYNDNAR 164

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYALPQAP 198
           K +  R  II  +R  + ++ FIE  TPI+      GA      + VN     + L  A 
Sbjct: 165 KAMEIRYMIIREIREFLYSKGFIEVETPIVQPVYG-GALAKPFKTHVNYLNEDWYLRIAL 223

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y +  +  GF++ F+I   FR+ED      P EF  L++  ++ + +DI+N  E++L+
Sbjct: 224 ELYLKRYIIGGFNKVFEIGKVFRNEDIDVTHNP-EFTLLELYWAYADYNDIMNLTEDLLK 282

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRR 285
            V +  +N   V+     I ++   +R
Sbjct: 283 SVIKRVTNSTKVAYGKYEIDFEAPFKR 309



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA   GMPP GG+  GIDRIVML+    +++EV  FPM
Sbjct: 445 RALSYGMPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482


>gi|153813032|ref|ZP_01965700.1| hypothetical protein RUMOBE_03440 [Ruminococcus obeum ATCC 29174]
 gi|149830834|gb|EDM85924.1| hypothetical protein RUMOBE_03440 [Ruminococcus obeum ATCC 29174]
          Length = 586

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 132/284 (46%), Gaps = 32/284 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +I+D  G  QV    D+   E     +   +  I GL    
Sbjct: 8   VAIAGRMMFKRVMGKASFCNIQDLQGNIQVYVARDAIGEESYADFKKSDIGDIFGL---- 63

Query: 81  SAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
             E       TG+I + A+K+ +L+ + + LP    G  +     R++ R++DL  +   
Sbjct: 64  --EGFAFRTRTGEISIHAEKMTMLTKSLQILPEKFHGLTD--TDTRYRQRYVDLIMNQDS 119

Query: 140 KNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ-- 196
           KN+ +KR++I+  +R  +   +F+E  TP+L +++   A      +R  +  + AL +  
Sbjct: 120 KNVFIKRSQILKEIRNFLAGRDFMEVETPMLVSNAGGAA------ARPFETHYNALNEDV 173

Query: 197 ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
               + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++  
Sbjct: 174 KLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMEL 232

Query: 253 MENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
            E++ R + E+      +S N         F R+  ++AI++Y 
Sbjct: 233 TESMFRYLAEKVCGSTKISYNGVEIDLGKPFARMTMNEAIKKYA 276



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+VMLL  ++ +R+V LFP
Sbjct: 402 ALEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLFP 437


>gi|333031523|ref|ZP_08459584.1| Lysyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332742120|gb|EGJ72602.1| Lysyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 576

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 13/213 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR++G +   R  G   F++++D  G  QV    D  C +  KS+ +     +  L    
Sbjct: 56  VRIAGRMMSRRVMGKASFMELQDSKGRIQVYITRDDICPDEDKSMYNTVFKKLLDLGDFV 115

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYRFLD 132
             E        G+I + A+KI ILS + + PLP+   ++         PE +R++ R++D
Sbjct: 116 GIEGFVFRTKMGEISVHAEKITILSKSIK-PLPIVKHKDGETYDSFDDPE-MRYRRRYVD 173

Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   K+I +KRT+I NSMR       +IE  TP+L        AR F+         
Sbjct: 174 LAVNEGIKDIFIKRTKIYNSMRDFFNTRGYIEVETPVLQPIPGGAAARPFITHHNALDMP 233

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            Y L  A + Y + L+  GFD  ++ +  FR+E
Sbjct: 234 LY-LRIANELYIKRLVVGGFDGVYEFSRNFRNE 265



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VMLL G ++++EV  FP
Sbjct: 461 RALEYGMPPTAGMGIGMDRLVMLLTGQESIQEVLFFP 497


>gi|284173397|ref|ZP_06387366.1| lysyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|261601707|gb|ACX91310.1| lysyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 492

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 121/267 (45%), Gaps = 13/267 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +  +G V  +R HG   F+DI D     Q+    D    E+ +     ++    G ++  
Sbjct: 54  ISTAGRVANIRRHGKASFVDIFDEGEKLQLYMRVD----ELKEKYDKFFIYVGRGDIIGV 109

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139
             +      + G++ L  +  ++LS A  L  P    +  PE  R+ +R++D L  D   
Sbjct: 110 KGDLFYT--MKGELSLLVKDYQLLSKA--LIEPPDWSKLSPE-FRYAHRYVDFLYNDNAR 164

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYALPQAP 198
           K +  R  II  +R  + ++ FIE  TPI+      GA      + VN     + L  A 
Sbjct: 165 KAMEIRYTIIREIREFLYSKGFIEVETPIVQPVYG-GALAKPFKTHVNYLNEDWYLRIAL 223

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y +  +  GF++ F+I   FR+ED      P EF  L++  ++ + +DI+N  E++L+
Sbjct: 224 ELYLKRYIIGGFNKVFEIGKVFRNEDIDVTHNP-EFTLLELYWAYADYNDIMNLTEDLLK 282

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRR 285
            V ++ +N   +      I ++   +R
Sbjct: 283 SVVKKVTNSTKIVYGKYEIDFEGPFKR 309



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA   GMPP GG+  GIDRIVML+    +++EV  FPM
Sbjct: 445 RALSYGMPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482


>gi|228478164|ref|ZP_04062772.1| lysyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228249843|gb|EEK09113.1| lysyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 496

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 19/251 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + ++     ++G +   R  G + F  I+D  G  Q+    D+     +EI K       
Sbjct: 56  LHEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L I+G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGIEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLSDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   RD+  +  V R++II+ +R  + A+ F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRDSFDR-FVTRSKIISEIRRYLDAQGFLEVETPVLHNEAGGAAAKPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFH 282

Query: 248 DILNTMENVLR 258
           DI+N  E +++
Sbjct: 283 DIMNLTEGIIQ 293



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|154413436|ref|XP_001579748.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121913958|gb|EAY18762.1| hypothetical protein TVAG_267950 [Trichomonas vaginalis G3]
          Length = 537

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H SE++LQ  +  G+    +         +F+ G PPH G+  
Sbjct: 452 YDMFLRGEEIVSGAQRIHNSELLLQCAAKKGVDLSPI----MPYVESFRYGAPPHAGLGC 507

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+DRI  L LG  NVR  SLFP
Sbjct: 508 GLDRITFLFLGLHNVRRGSLFP 529



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 2/122 (1%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R   R LDLR          ++++    R  ++A +F E  TP L  ++ EG  +  
Sbjct: 211 QKLRLDNRVLDLRTVANQAIFRLQSKVCQFFREFLLARDFQEIHTPKLIPTASEGGSNVF 270

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                +  ++ A  Q+PQ YKQ+ + SG  R F+I P FR E   + R   EF  LD EM
Sbjct: 271 EVKYFDSKAYLA--QSPQLYKQMAVVSGMPRVFEIGPVFRAEKSFTHRHLTEFTGLDAEM 328

Query: 242 SF 243
           +F
Sbjct: 329 AF 330


>gi|227489351|ref|ZP_03919667.1| lysyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227090724|gb|EEI26036.1| lysyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 514

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 104/215 (48%), Gaps = 9/215 (4%)

Query: 60  EIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           E+ +     W   +D G ++S +   I++    G++ + A   ++ S A   PLPV   +
Sbjct: 109 EVGEESLKNWKADVDLGDIISVTGRVISSK--RGELSVMATDWQMASKALR-PLPV-AHK 164

Query: 119 EYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
           E  E  R ++R+ DL  RD   KN + R +++ ++R  + +E F+E  TP+L T      
Sbjct: 165 EMSEDQRIRHRYTDLIMRDEARKNALTRIKVMRALRNFLESEGFLEVETPMLQTLHGGAA 224

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+  S       Y L  AP+ + +  +  G +R F++   FR+E   S   P EF  
Sbjct: 225 ARPFVTHSNAMDMDLY-LRIAPELFLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFAM 282

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           L+   ++ + +   + ++ +++ V  E     TV+
Sbjct: 283 LETYQAWGDYNTGADLIKRLIQSVATEVFGSTTVT 317



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSN-----VGISKEVVENRFGGLYRAFQCGMPP 535
           ++DL   GFE+A+G        +  + F +      G   E +E     L+ A +  MPP
Sbjct: 424 KWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMELDEDFLF-AMEQAMPP 482

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             G   GIDR++M L G   +RE  LFP+
Sbjct: 483 TSGNGMGIDRLLMALTGL-GIRETVLFPI 510


>gi|157960585|ref|YP_001500619.1| lysyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189082970|sp|A8H0J7|SYK_SHEPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157845585|gb|ABV86084.1| lysyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 501

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 128/278 (46%), Gaps = 39/278 (14%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           FL I+D  G  Q  A  D     + K ++ +++    G ++           +TGQ+ LS
Sbjct: 76  FLVIQDVSGRIQAYAGKD-----VQKDLKEKFLGLDIGDIIG----------VTGQLHLS 120

Query: 98  AQKIEILSVAEELPLPVFGEREYPESI--------RFKYRFLDL-RRDTLHKNIVKRTRI 148
             K ++    EE  L     R  PE          R++ R++DL   +   +  + R+++
Sbjct: 121 G-KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEDSREAFIMRSKV 179

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
           ++++R  M+ + F+E  TP++  S P GA  R F         + Y L  AP+ Y + L+
Sbjct: 180 VSAIRNFMVKKEFMEVETPMM-HSIPGGASARPFETHHNALDIAMY-LRIAPELYLKRLV 237

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
             GF+R F+I   FR+E   S R   EF  ++  M++ + +D+++  E +L  +  E   
Sbjct: 238 VGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADFNDLMDLTEEMLSSIATELCG 296

Query: 267 G-------NTVS--NNFLRICYDDAIRRYGTDKPDLRN 295
                   +TV     + R+   DAI++Y  D   +++
Sbjct: 297 SPQLPYGEHTVDFGGPYARLSMLDAIKKYNPDNATIQS 334



 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|260824982|ref|XP_002607446.1| hypothetical protein BRAFLDRAFT_276665 [Branchiostoma floridae]
 gi|229292793|gb|EEN63456.1| hypothetical protein BRAFLDRAFT_276665 [Branchiostoma floridae]
          Length = 593

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 122/274 (44%), Gaps = 23/274 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DS 56
           +Y   + GD  ++DV   + ++G VH  R  G  +IF D+R      QV+AN      + 
Sbjct: 105 KYHHLNAGD-HLTDVT--LSVAGRVHAKRESGQKLIFYDLRAEAMKIQVMANARFYTSEE 161

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF 115
             F+I   +R   ++ + G                G++ +    I++LS     LP   F
Sbjct: 162 EFFKINGRIRRGDIIGVIG---------NPGKTKKGELSIIPTSIQLLSPCLHMLPHLHF 212

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
           G     +  R++ R+LDL   + +    + R RIIN +R  +    F+E  TP++   + 
Sbjct: 213 GITN--KETRYRQRYLDLIINEHVRDKFIIRARIINYVRRFLDELGFLEVETPMMNMDAG 270

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                  V  R        +  AP+ Y ++L+  G DR ++I   FR+E       P EF
Sbjct: 271 GATDKPFVTHRNELDMDLYMRVAPELYLKMLIVGGIDRVYEIGRLFRNEGIDLTHNP-EF 329

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
              +  M++ + +D++   E++L G+ +  + G+
Sbjct: 330 TTCEFYMAYADYNDLMKITESLLSGMVKHITGGS 363



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP  G   GIDR+ M L  + N++EV  FP
Sbjct: 532 SLEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLFFP 567


>gi|225679117|gb|EEH17401.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 636

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 126/253 (49%), Gaps = 11/253 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           VR++G ++  R  G  +IF D+R      QV     +A  +++   + E +   D + V+
Sbjct: 128 VRIAGRIYTKRSAGAKLIFYDVRAEGVKIQVACQSQNAEGDVSFEAQHEHLRRGDIIGVV 187

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A+++ +L+    ++P   +G R+  +  R++ R+LDL  + 
Sbjct: 188 GWPGRTAPKNRADGELSIFAKEVILLAPCLHQIPSEHYGLRD--QEQRYRQRYLDLIMND 245

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194
             +N+ + R+++I  +R      +F+E  TP++ + +    A+ F+   + +N   F  +
Sbjct: 246 KSRNVFITRSKMITYIRRFFDERDFVEVETPMMNSIAGGATAKPFITHHNDLNMDMFMRV 305

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  E
Sbjct: 306 --APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNVTE 362

Query: 255 NVLRGVFEEFSNG 267
            ++ G+ +  + G
Sbjct: 363 ELVSGLVKHITGG 375



 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576


>gi|126002159|ref|XP_001352279.1| GA10495 [Drosophila pseudoobscura pseudoobscura]
 gi|54640540|gb|EAL29381.1| GA10495 [Drosophila pseudoobscura pseudoobscura]
          Length = 557

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 120/286 (41%), Gaps = 21/286 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G  + GS V++ GWVHR+R  G  +IF+ +RD  G  Q V N        A ++ +E  +
Sbjct: 129 GTENRGSRVKVYGWVHRLRRQGKALIFITLRDGTGFLQCVLNDQLCQTYDALTLSTESTV 188

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  EL+    E++ +A           E    ++   R +
Sbjct: 189 VLFGTLKL----IPEGKTAPGGHELNVDYWELIGLAPPGGADAILNEEAQPDVQLDNRHI 244

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R+ ++ + R   +A  + E + P L  +  EG          ++ ++
Sbjct: 245 MIRGENTSKVLKMRSVVMQAFRAHYLARGYNEVTPPTLVQTQVEGGSTLFKLQYFSEEAY 304

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV------- 244
             L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+       
Sbjct: 305 --LTQSSQLYLETCLPALGD-VFTIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFDDLLD 361

Query: 245 -EQDDILNTMENVLRG-----VFEEFSNGNTVSNNFLRICYDDAIR 284
             +D + + ++ VL+      V E   +    +  F R+ Y DAI+
Sbjct: 362 RLEDLVCDVVDRVLKSPWGNLVKELNPDFKPPTKPFRRMNYSDAIK 407



 Score = 40.4 bits (93), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 12/90 (13%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGI 539
           L+ N  EI  G +R   SE +L+ +   GI  +      + R  G          PHGG 
Sbjct: 474 LLPNVGEIVGGSMRIFDSEELLKGYQREGIDPKPYYWYTDQRIYGTL--------PHGGY 525

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G++R +  LL   ++REV L+P   + C
Sbjct: 526 GLGLERFLCWLLNRYHIREVCLYPRFLDRC 555


>gi|326407318|gb|ADZ64389.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 447

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 114/295 (38%), Gaps = 42/295 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  WV      G + FL +RD     Q VV  P+          +A F+  K +
Sbjct: 14  VGETVKIGAWVADKSGKGKLQFLQLRDGTAFFQAVVFKPNMIENFGEEEGTAKFDEIKHL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V   S             EL    +E++  + + P+     +E+     
Sbjct: 74  SQETSVYVTGVVKEDSRSKFG-------YELDVTDLEVIGQSHDYPIT---PKEHGVEFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E   +      
Sbjct: 124 LDNRHLWLRSKRQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILSGNAAENTTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
               +F  L Q+ Q Y +   MA G  R F   P FR E  ++ R   EF+ +D E  FV
Sbjct: 184 FGNSAF--LSQSGQLYLEAGAMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYPFV 239

Query: 245 EQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
             D+ L+  E     +++GV +  +                +   F R+ YD AI
Sbjct: 240 THDESLDIQEAYVKALIQGVLDNAAYALETLERDTSMLQKYIDTPFKRVSYDAAI 294


>gi|167622750|ref|YP_001673044.1| lysyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189082969|sp|B0TTP2|SYK_SHEHH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|167352772|gb|ABZ75385.1| lysyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 501

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 109/226 (48%), Gaps = 24/226 (10%)

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--------RFKYRFLDL-RRDTLHK 140
           +TGQ+ LS  K ++    EE  L     R  PE          R++ R++DL   +   +
Sbjct: 113 VTGQLHLSG-KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEQSRE 171

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
             + R+++++++R  M+ + F+E  TP++  S P GA  R F         + Y L  AP
Sbjct: 172 AFIMRSKVVSAIRNFMVKKEFMEVETPMM-HSIPGGASARPFATHHNALDIAMY-LRIAP 229

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++  M++ + +D+++  E +L 
Sbjct: 230 ELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADFNDLMDLTEEMLS 288

Query: 259 GVFEEFSNG-------NTVS--NNFLRICYDDAIRRYGTDKPDLRN 295
            +  E           +TV     + R+   DAI++Y  D   +++
Sbjct: 289 SIATELCGSPQLPYGEHTVDFGGPYARLSMLDAIKKYNPDNATIQS 334



 Score = 41.2 bits (95), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|227828292|ref|YP_002830072.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|227831050|ref|YP_002832830.1| lysyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229585522|ref|YP_002844024.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238620484|ref|YP_002915310.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|284998545|ref|YP_003420313.1| lysyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|227457498|gb|ACP36185.1| lysyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|227460088|gb|ACP38774.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228020572|gb|ACP55979.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238381554|gb|ACR42642.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|284446441|gb|ADB87943.1| lysyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|323478087|gb|ADX83325.1| lysyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 492

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 13/267 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +  +G V  +R HG   F+DI D     Q+    D    E+ +     +     G ++  
Sbjct: 54  ISTAGRVANIRRHGKASFVDIFDEGEKLQIYMRVD----ELKEKYDRFFTYVGRGDIIGV 109

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139
             +      + G++ L  +  ++LS A  L  P    +  PE  R+ +R++D L  D   
Sbjct: 110 RGDLFYT--MKGELSLLVKDYQLLSKA--LIEPPDWSKLSPE-FRYAHRYVDFLYNDNAR 164

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYALPQAP 198
           K +  R  II  +R  + ++ FIE  TPI+      GA      + VN     + L  A 
Sbjct: 165 KAMEIRYMIIREIREFLYSKGFIEVETPIVQPVYG-GALAKPFKTHVNYLNEDWYLRIAL 223

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y +  +  GF++ F+I   FR+ED      P EF  L++  ++ + +DI+N  E++L+
Sbjct: 224 ELYLKRYIIGGFNKVFEIGKVFRNEDIDVTHNP-EFTLLELYWAYADYNDIMNLTEDLLK 282

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRR 285
            V +  +N   V+     I ++   +R
Sbjct: 283 SVIKRVTNSTKVAYGKYEIDFEAPFKR 309



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA   GMPP GG+  GIDRIVML+    +++EV  FPM
Sbjct: 445 RALSYGMPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482


>gi|219870540|ref|YP_002474915.1| lysyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219690744|gb|ACL31967.1| lysyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 483

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 14/208 (6%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           TG++ + A ++++L+ A   PLP   +    +  R++ R+LDL   +   +  V R++++
Sbjct: 129 TGELTVRAAELQLLTKALR-PLPNKHKGLTDQETRYRQRYLDLIANEESRRAFVIRSKVV 187

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           + +R   + ++FIE  TP+L        A+ F+          Y L  AP+ Y + L+  
Sbjct: 188 SGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMY-LRIAPELYLKRLVVG 246

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GF+R F++   FR+E       P EF  ++   ++ +  D+++  E +LR +  +     
Sbjct: 247 GFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELLRKLALDILGTT 305

Query: 269 TV---------SNNFLRICYDDAIRRYG 287
           TV            F RI   +AI +YG
Sbjct: 306 TVPYGEYVFDFGKPFERITMHEAIVKYG 333


>gi|16799337|ref|NP_469605.1| lysyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|38258397|sp|Q92F47|SYK_LISIN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|16412689|emb|CAC95493.1| lysyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 498

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 155/356 (43%), Gaps = 45/356 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F  I+D +   Q+    D+    I +   + + L   G ++  
Sbjct: 63  VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAIFKLADLGDIIGI 118

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                  N  TG++ + A +  +LS +   LP    G ++  +  R++ R+LDL  +   
Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           +N  V R++I+   R  M  + F+E  TP+L T +    A+ F+          Y L  A
Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++ +E ++
Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292

Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTDKPDLRNPIIMHN----- 301
             V ++  NG T          ++ N+ RI   DA++ Y G D  ++ +    H      
Sbjct: 293 STVCKQV-NGTTKITYGEYDVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEAHELAKKH 351

Query: 302 ---VTEHFVHSE-----FRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343
              VTEH  +       F  + +   + P + V+  P      AK    +  F DR
Sbjct: 352 DVAVTEHMTYGHILNEFFETYVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG+  GIDR+VMLL  A ++R++ LFP  ++
Sbjct: 457 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 496


>gi|2961644|gb|AAC64260.1| lysyl-tRNA synthetase [Campylobacter jejuni]
          Length = 355

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 128/281 (45%), Gaps = 17/281 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +  +R  G  IF +I D     Q+  + DS   E+   ++    L +  +V+ +  
Sbjct: 60  VAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKN--LEVGDIVLVKGF 117

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKN 141
             +     TG+  L A ++++ + A  +PLP           R++ R++D+  +  + K+
Sbjct: 118 PFVTK---TGEFSLHASEVKLATKAI-VPLPEKYHGLTDIEQRYRKRYVDMIMNVEVRKD 173

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
            + R+++++ +R     + F+E  TP++   +        V    + G    L  AP+ Y
Sbjct: 174 FLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPELY 233

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+  GF+  F+I  CFR+E       P EF  ++   ++    D+++  E +   + 
Sbjct: 234 LKRLIVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTEELFALLL 292

Query: 262 EEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293
           ++ + G T+         S  F RI Y DA+ +YG    DL
Sbjct: 293 DKLNLGKTIEFDGKMINFSKPFERITYKDALCKYGGLDRDL 333


>gi|50539832|ref|NP_001002386.1| lysyl-tRNA synthetase [Danio rerio]
 gi|49900533|gb|AAH76028.1| Lysyl-tRNA synthetase [Danio rerio]
          Length = 602

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 127/281 (45%), Gaps = 27/281 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP----- 54
           + RY     GD  ++DV   + LSG VH  R  G  ++F D+R      QV+AN      
Sbjct: 122 IERYNHLQPGD-HLTDV--VLNLSGRVHAKRASGAKLLFYDLRGEGVKLQVMANSRNYTS 178

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLP 113
           + A   I   +R   ++ + G                G++ +   ++ +LS     LP  
Sbjct: 179 EEAFVHINNKLRRGDIIGVRG---------NPGKTKKGELSIIPVEMTLLSPCLHMLPHL 229

Query: 114 VFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
            FG ++  +  RF+ R+LDL   D + +  V R++II  +R  +    F+E  TP++   
Sbjct: 230 HFGLKD--KETRFRQRYLDLILNDFVRQKFVTRSKIITYLRSFLDQLGFLEIETPMMNLI 287

Query: 173 SPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            P GA  + F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       
Sbjct: 288 -PGGAVAKPFITYHNDLNMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHN 345

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           P EF   +  M++ +  D++   E +L G+ +  +    V+
Sbjct: 346 P-EFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGAYKVT 385



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 549 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 584


>gi|329296880|ref|ZP_08254216.1| lysyl-tRNA synthetase [Plautia stali symbiont]
          Length = 506

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 136/309 (44%), Gaps = 31/309 (10%)

Query: 5   RTHSCGDLGVSD----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           R H+  D   +D    +G  V ++G +   R  G   F  ++D  G  Q+  + D     
Sbjct: 48  RLHADYDSKENDELEALGVEVSVAGRMITRRIMGKASFATLQDVGGQIQIYVSRDDLPEG 107

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP       
Sbjct: 108 VYNEQFKKWDL---GDILGARGKLFKTK--TGELSIHISELRLLTKALR-PLPDKFHGLA 161

Query: 121 PESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-- 177
            +  R++ R+LDL   D   K    R++I+  +R  M+  +F+E  TP++    P GA  
Sbjct: 162 DQETRYRQRYLDLISNDDSRKTFKIRSQIMAGIRQFMVNRDFMEVETPMMQVI-PGGASA 220

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFY 235
           R F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   PR +    EF 
Sbjct: 221 RPFITHHNALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISPRHN---PEFT 276

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286
            +++ M++ +  D++   E++ R + ++      V            F ++   +AI++Y
Sbjct: 277 MMELYMAYADYKDLIELTESLFRTLAQDVLGTTEVPYGEHTFDFGKPFEKLTMREAIKKY 336

Query: 287 --GTDKPDL 293
              TD  DL
Sbjct: 337 RPETDLADL 345



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRLVMLFTNSHTIRDVILFP 499


>gi|269792728|ref|YP_003317632.1| lysyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100363|gb|ACZ19350.1| lysyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 505

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 13/270 (4%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-V 77
             + ++G +  +R HG   F  + +  G  Q+    D    E +     +WV   D L V
Sbjct: 67  ELLSVAGRIMTLRRHGKASFATLEEDSGRIQLYFQLDQLG-EESYGFFKKWVDTGDILGV 125

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
             R+  T       G++ +   + ++L+ A   PLP        + +R++ R+LDL  + 
Sbjct: 126 NGRAFRTQR-----GELSIKVTEFKLLTKALR-PLPEKWHGLKDQEVRYRQRYLDLMVNP 179

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
            + +   KRTRII ++R  M +   +E +TPIL T +    AR F+          Y L 
Sbjct: 180 EVRETFRKRTRIIQTVRRVMESHGTLEVTTPILSTLAGGANARPFVTFHNALGIPMY-LR 238

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + Y + L+   FDR ++I P FR+E       P EF  +++  ++   +D++N  E 
Sbjct: 239 IATELYLKRLVVGMFDRVYEIGPNFRNEGIDLKHNP-EFTAMEVYWAYANNEDMMNLCEE 297

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +L    +   +  T +     IC++   RR
Sbjct: 298 ILVACADAVGS-RTFTYQGREICFEPPFRR 326



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL  +K++R+V LFP
Sbjct: 464 ALEYGLPPTGGMGIGIDRLVMLLTDSKSIRDVILFP 499


>gi|323475362|gb|ADX85968.1| lysyl-tRNA synthetase [Sulfolobus islandicus REY15A]
          Length = 492

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 13/267 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +  +G V  +R HG   F+DI D     Q+    D    E+ +     +     G ++  
Sbjct: 54  ISTAGRVANIRRHGKASFVDIFDEGEKLQIYMRVD----ELKEKYDRFFTYVGRGDIIGV 109

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139
             +      + G++ L  +  ++LS A  L  P    +  PE  R+ +R++D L  D   
Sbjct: 110 RGDLFYT--MKGELSLLVKDYQLLSKA--LIEPPDWSKLSPE-FRYAHRYVDFLYNDNAR 164

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYALPQAP 198
           K +  R  II  +R  + ++ FIE  TPI+      GA      + VN     + L  A 
Sbjct: 165 KAMEIRYMIIREIREFLYSKGFIEVETPIVQPVYG-GALAKPFKTHVNYLNEDWYLRIAL 223

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y +  +  GF++ F+I   FR+ED      P EF  L++  ++ + +DI+N  E++L+
Sbjct: 224 ELYLKRYIIGGFNKVFEIGKVFRNEDIDVTHNP-EFTLLELYWAYADYNDIMNLTEDLLK 282

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRR 285
            V +  +N   V+     I ++   +R
Sbjct: 283 SVIKRVTNSTKVAYGKYEIDFEAPFKR 309



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA   GMPP GG+  GIDRIVML+    +++EV  FPM
Sbjct: 445 RALSYGMPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482


>gi|149910166|ref|ZP_01898812.1| lysyl-tRNA synthetase [Moritella sp. PE36]
 gi|149806752|gb|EDM66716.1| lysyl-tRNA synthetase [Moritella sp. PE36]
          Length = 502

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 125/262 (47%), Gaps = 25/262 (9%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           FL I+D  G  Q  A+ D     + K+ +++    + GL +        A   +G+ +L 
Sbjct: 76  FLAIQDTAGRIQAYASKD-----VQKAQKAD----LGGLDIGDIVGITGALNKSGKGDLY 126

Query: 98  AQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCR 155
            +  + + + + L PLP        + +R++ R++DL  +   +N  + R++++ ++R  
Sbjct: 127 VEMTDYVLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEESRNAFIVRSKLVTAIRNF 186

Query: 156 MIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
           M++++++E  TP++    P GA  R F+        + Y L  AP+ Y + L+  GFDR 
Sbjct: 187 MVSKDYMEVETPMMHVI-PGGATARPFITHHNALDQAMY-LRVAPELYLKRLVVGGFDRV 244

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV--- 270
           F+I   FR+E   S R   EF  ++   ++ + +D+++  E +L  V  E      +   
Sbjct: 245 FEINRNFRNEG-LSPRHNPEFTMMEFYQAYADYNDLMDFTEEMLSTVAVEVLGATAMPYG 303

Query: 271 ------SNNFLRICYDDAIRRY 286
                    + RI   DAI++Y
Sbjct: 304 DHMVEFGGKYTRISMLDAIKQY 325



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ ML      +R+V LFP
Sbjct: 459 ALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFP 494


>gi|118581419|ref|YP_902669.1| lysyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118504129|gb|ABL00612.1| lysyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 503

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 125/277 (45%), Gaps = 22/277 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G   F+ I+D  G  Q+    D    EI +   +++     G ++    
Sbjct: 68  VAGRILARRSFGKAAFIKIQDRKGRLQLYIKKD----EIGEQAFADFETFDIGDIVG--V 121

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
           E       T ++ L A+KI +L V    PLP           R++ R++DL  +   + I
Sbjct: 122 EGFPFRTKTNELSLHAKKIRLL-VKSLHPLPEKFHGLTDVETRYRQRYVDLIVNPESREI 180

Query: 143 -VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQAPQ 199
            +KR+RIIN +R  M A +F+E  TP++    P G  A+ F+          + L  AP+
Sbjct: 181 FIKRSRIINLIRAFMTARDFLEVETPMMQ-RIPGGATAKPFITHHNALDMQLF-LRIAPE 238

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV--- 256
            Y + L+  G +R F+I   FR+E   S R   EF  ++   ++   +D++N  E +   
Sbjct: 239 LYLKRLVVGGMERVFEINRNFRNEGI-SVRHNPEFTMMEFYQAYATYEDLMNFTEELFCH 297

Query: 257 ----LRGVFEEFSNGNTVS--NNFLRICYDDAIRRYG 287
               + G  +  + G  +S    + R+   DAI  YG
Sbjct: 298 VAQEVLGTLDFVNQGREISFQRPWKRLTVRDAILEYG 334



 Score = 45.4 bits (106), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 459 RALEYGLPPTAGEGIGIDRLVMLLTDSASIRDVILFP 495


>gi|167855466|ref|ZP_02478230.1| lysyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853395|gb|EDS24645.1| lysyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 500

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 14/208 (6%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           TG++ + A ++++L+ A   PLP   +    +  R++ R+LDL   +   +  V R++++
Sbjct: 129 TGELTVRAAELQLLTKALR-PLPNKHKGLTDQETRYRQRYLDLIANEESRRAFVIRSKVV 187

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           + +R   + ++FIE  TP+L        A+ F+          Y L  AP+ Y + L+  
Sbjct: 188 SGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMY-LRIAPELYLKRLVVG 246

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GF+R F++   FR+E       P EF  ++   ++ +  D+++  E +LR +  +     
Sbjct: 247 GFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTEELLRKLALDILGTT 305

Query: 269 TV---------SNNFLRICYDDAIRRYG 287
           TV            F RI   +AI +YG
Sbjct: 306 TVPYGEYVFDFGKPFERITMHEAIVKYG 333



 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EI +G    + +E   + F     +KE  ++           A + G+PP 
Sbjct: 409 RFELFIGGREIGNGFSELNDAEDQAERFQAQVAAKEAGDDEAMFYDDNFVVALEHGLPPT 468

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+ M+   A ++R+V LFP
Sbjct: 469 AGEGLGIDRLAMIFANAPSIRDVILFP 495


>gi|15896444|ref|NP_349793.1| lysyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|39932231|sp|Q97EB7|SYK_CLOAB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|15026267|gb|AAK81133.1|AE007815_3 Lysyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510602|gb|ADZ22238.1| lysyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 515

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 116/245 (47%), Gaps = 19/245 (7%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCIDG 75
             V ++G +   R HG   F DI D YG  Q+    D    E  K  ++  +   + I G
Sbjct: 72  KIVTVAGRLMSKRVHGKAGFSDIYDRYGKIQLYLKIDDVGEEKLKEFKTFDIGDFVVITG 131

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLR 134
            V             TG+I L   K+E+++ + + LP    G ++    ++++ R++DL 
Sbjct: 132 KVFKTK---------TGEITLHVTKLELIAKSLKPLPEKFHGLKD--PDLKYRQRYVDLI 180

Query: 135 -RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
               + +  +KRT II ++R  +  ++++E  TP+L T +S   AR F           +
Sbjct: 181 INQDVRETFMKRTAIIKAVREFLDNKDYLEVETPVLSTIASGASARPFSTHHNALDLDMH 240

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF++ ++I   FR+E       P EF  +++  ++ + +D++  
Sbjct: 241 -LRIATELYLKRLIVGGFEKVYEIGKDFRNEGIDVRHNP-EFTMIELYEAYADYNDMMEI 298

Query: 253 MENVL 257
            EN++
Sbjct: 299 TENMV 303



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VM L  + ++R+V LFP
Sbjct: 471 ALEIGMPPTGGMGMGMDRLVMFLTDSPSIRDVILFP 506


>gi|206901450|ref|YP_002250648.1| asparaginyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206740553|gb|ACI19611.1| asparaginyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 433

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 15/240 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           + + GW+   R  G I+FL IRD  G  Q VA  D+      E  + +  E  L + G +
Sbjct: 19  IEVRGWLFNKRSSGKIVFLIIRDGTGYIQGVATLDNFTQDQLESLEKIPIESSLIVVGDL 78

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                         G  EL  + + ++S +EE P+    ++++      + R L +R   
Sbjct: 79  KKEPR-------APGGYELLLKSVNVVSYSEEYPI---QKKDHSIDFLLERRHLWIRSRK 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            +  +  R+ ++ ++R  +  + F+    PILT S+ EG          + G  Y L Q+
Sbjct: 129 QNAILRIRSEVVKAIRDFLDEKGFVLIDAPILTPSACEGTTTLFELDYFDLGKAY-LSQS 187

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +      F + +   P FR E  ++ R   EF+ ++ EM+F +  D +   E ++
Sbjct: 188 GQLYME-AACMAFGKVYCFGPAFRAEKSKTRRHLTEFWMVEPEMAFWDWQDNMRLQEELV 246


>gi|114673287|ref|XP_001139091.1| PREDICTED: asparaginyl-tRNA synthetase isoform 3 [Pan troglodytes]
          Length = 510

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 113/289 (39%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V             +  E   C +G+
Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 171

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           ++S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 172 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 231

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ +    R       + E + P L  +  EG           
Sbjct: 232 NRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 291

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  D
Sbjct: 292 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 348

Query: 248 DILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAI 283
           D+LN +E+++  V +                N       F R+ Y DAI
Sbjct: 349 DLLNRLEDLVCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAI 397


>gi|226288139|gb|EEH43652.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 609

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 126/253 (49%), Gaps = 11/253 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           VR++G ++  R  G  +IF D+R      QV     +A  +++   + E +   D + V+
Sbjct: 128 VRIAGRIYTKRSAGAKLIFYDVRAEGVKIQVACQSQNAEGDVSFEAQHEHLRRGDIIGVV 187

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A+++ +L+    ++P   +G R+  +  R++ R+LDL  + 
Sbjct: 188 GWPGRTAPKNRADGELSIFAKEVILLAPCLHQIPSEHYGLRD--QEQRYRQRYLDLIMND 245

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194
             +N+ + R+++I  +R      +F+E  TP++ + +    A+ F+   + +N   F  +
Sbjct: 246 KSRNVFITRSKMITYIRRFFDERDFVEVETPMMNSIAGGATAKPFITHHNDLNMDMFMRV 305

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  E
Sbjct: 306 --APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNVTE 362

Query: 255 NVLRGVFEEFSNG 267
            ++ G+ +  + G
Sbjct: 363 ELVSGLVKHITGG 375



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576


>gi|218961955|ref|YP_001741730.1| lysyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167730612|emb|CAO81524.1| lysyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 498

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 135/317 (42%), Gaps = 29/317 (9%)

Query: 4   YRTHSCGDLGVSDVGSF-----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           YRTH   DL             V ++G +  +R  G I F D+ D  G  Q+      A 
Sbjct: 32  YRTHYISDLLKDKEEQLQKAEEVTITGRLTAMRRQGKIGFGDLEDISGKIQLYV----AQ 87

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
             I +     + LC  G  +  + +T      TG+  L    I++LS     PLP   E+
Sbjct: 88  NLIGEENYELFKLCDPGDFIQATGKTFFTQ--TGEYSLKCNNIKLLS-KNIRPLPAVKEK 144

Query: 119 -------EYPE----SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECST 166
                   Y E     +R++ R+LDL  +  H+ + + R +II ++R  M +  ++E  T
Sbjct: 145 IVDGKKIRYDEFSDIELRYRKRYLDLLLNPEHRKVFETRAKIITAIRNFMDSRGYVEVET 204

Query: 167 PILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           PIL        AR F+          Y L  A + Y + L+  GF++ +++   FR+E  
Sbjct: 205 PILQPLYGGANARPFITHHNTLDMDLY-LRIATELYLKRLIVGGFEKVYELGKDFRNEGM 263

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
                P EF  ++   ++ + + +++  E +++ +  +    +T   +  ++C     +R
Sbjct: 264 DRTHNP-EFTMIEFYEAYSDLEGMMDIAEELIKHLALDIIGKDTFFYHNHQVCLSGEWKR 322

Query: 286 YGTDKPDLRNPIIMHNV 302
                PDL +  +  NV
Sbjct: 323 ASL--PDLVSEFVGQNV 337



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG   GIDR+VMLL    +++EV LFP
Sbjct: 458 ALEYGMPPMGGQGIGIDRLVMLLTENDSIKEVILFP 493


>gi|238754560|ref|ZP_04615914.1| Lysyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238707191|gb|EEP99554.1| Lysyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 505

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 21/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+  + D     +      +W L   G ++  
Sbjct: 68  VTVAGRMMTRRIMGKASFVTLQDVGGQIQLYVSRDDLPEGVYNEEFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 RGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  K R+R+++ +R  M+ + F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 NTFKVRSRVMSGIRQFMVEKGFMEVETPMMQVI-PGGASARPFITHHNALDIDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E + 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286
           R + E     + V            F ++   +AI +Y
Sbjct: 299 RTLTETILGSSVVKYGEQEFDFGKPFTKLTMKEAICKY 336



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|161870293|ref|YP_001599463.1| lysyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161595846|gb|ABX73506.1| lysyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 491

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 42  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 100

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 101 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 154

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+  
Sbjct: 155 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 213

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 214 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 271

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    ++ N         F R+   +AI++Y
Sbjct: 272 SDYERMMQMAEDIIRNASHTVNGTANITYNGKEVDLESPFERLTILEAIKKY 323



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 450 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 486


>gi|77411588|ref|ZP_00787930.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77162373|gb|EAO73342.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 448

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 112/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---------NPDSAC--FEIAKSV 65
           VG  V +  WV      G I F+ +RD     Q VA           +S    F++ K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKFG-------YELDITDLEVIGESHEYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II S         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGKPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAI 283
           F+  ++ L+  E  ++ + +   N                   ++  F R+ YDDAI
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLNRAPQALDILERDVEALKRYIAEPFKRVSYDDAI 295



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ K   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDDYDALVAKMDELGMDKS--EYDFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|325198560|gb|ADY94016.1| lysyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 503

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      EI     
Sbjct: 54  GEIGKEELDPQGIPVKIAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEILDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANGESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    ++ N         F R+   +AI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  E   + F +    K+  ++    +   Y RA + G+PP 
Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|296823266|ref|XP_002850417.1| lysyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238837971|gb|EEQ27633.1| lysyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 608

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 125/253 (49%), Gaps = 11/253 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           VR++G ++  R  G  +IF D+R      QV         ++    + E +   D + ++
Sbjct: 128 VRIAGRIYTKRSAGAKLIFYDLRAEGVKVQVACQAQEVTGDVPFEAQHEQLRRGDIVGIV 187

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A+++ +LS    ++P   +G ++  +  RF+ R+LDL  + 
Sbjct: 188 GFPGRTNPKNRDDGELSIFARQVTLLSPCLHQIPSEHYGLKD--QEQRFRQRYLDLIMND 245

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194
             +N+ V R++I++ +R      +F+E  TP++ A +    A+ F+   + +N   F  +
Sbjct: 246 SSRNVFVTRSKIVSYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHHNDLNMNLFMRI 305

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  E
Sbjct: 306 --APELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDLMNVTE 362

Query: 255 NVLRGVFEEFSNG 267
           +++ G+ +  + G
Sbjct: 363 DLVSGLVKHVTGG 375



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576


>gi|15673810|ref|NP_267985.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. lactis
           Il1403]
 gi|20139920|sp|Q9CEK9|SYN_LACLA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|12724857|gb|AAK05926.1|AE006413_2 asparaginyl-tRNA synthetase [Lactococcus lactis subsp. lactis
           Il1403]
          Length = 447

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 114/295 (38%), Gaps = 42/295 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  V++  WV      G + FL +RD     Q VV  P+          +A F+  K +
Sbjct: 14  VGETVKIGAWVADKSGKGKLQFLQLRDGTAFFQAVVFKPNMIENFGEEEGTAKFDEIKHL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V   S             EL    +E++  + + P+     +E+     
Sbjct: 74  SQETSVYVTGVVKEDSRSKFG-------YELDVTDLEVIGQSHDYPIT---PKEHGVEFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E   +      
Sbjct: 124 LDNRHLWLRSKRQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILSGNAAENTTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
               +F  L Q+ Q Y +   MA G  R F   P FR E  ++ R   EF+ +D E  FV
Sbjct: 184 FGNSAF--LSQSGQLYLEAGAMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYPFV 239

Query: 245 EQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
             D+ L+  E     +++GV +  +                +   F R+ YD AI
Sbjct: 240 THDESLDIQEAYVKALIQGVLDNAAYALETLERDTSMLQKYIDTPFKRVSYDAAI 294


>gi|332230291|ref|XP_003264323.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic [Nomascus
           leucogenys]
          Length = 548

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 114/289 (39%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V             +  E   C +G+
Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 171

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           ++S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 172 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 231

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ +    R       + E + P L  +  EG           
Sbjct: 232 NRHMMIRGENMCKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 291

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  D
Sbjct: 292 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 348

Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283
           D+LN +E+        VL+      V E   N       F R+ Y DAI
Sbjct: 349 DLLNRLEDLVCDVVDRVLKSPAGSIVHELNPNFQPPKRPFKRMNYSDAI 397



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R + SE +L  +   GI        +       + G  PHGG   G+
Sbjct: 465 LMPNVGEIVGGSMRTYDSEEILAGYKREGIDP----TPYYWYTDQRKYGTCPHGGYGLGL 520

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           +R +  +L   ++R+V L+P
Sbjct: 521 ERFLTWILNRYHIRDVCLYP 540


>gi|325578590|ref|ZP_08148690.1| lysine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159826|gb|EGC71956.1| lysine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 502

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 23/283 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G +   R  G   F+ ++D  G  Q+    D+    + + V +E V   D G ++ 
Sbjct: 64  VAVAGRIMTRRAMGKATFITLQDMSGKIQLYVARDN----LPEGVYAEDVGSWDLGDIIG 119

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138
                      T ++ +   ++++L+ A   PLP           R++ R+LDL   +  
Sbjct: 120 VKGTLFKTK--TNELTIKTTEVQLLTKALR-PLPNKFHGLTDMEARYRQRYLDLISNEES 176

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQ 196
            +  + R++++  +R   I++ F+E  TP+L    P GA  R F+          Y L  
Sbjct: 177 RRTFIIRSKVVAGIREFFISKGFMEVETPMLQVI-PGGASARPFITHHNALDVDMY-LRI 234

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ +  D+++  E +
Sbjct: 235 APELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADYHDLMDNTEEL 293

Query: 257 LRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
           LR +  +      V            F RI   DA  +YG DK
Sbjct: 294 LRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATIKYGADK 336



 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536
           +++L   G EI +G    + +E   + F     +KE  ++    +      A + G+PP 
Sbjct: 411 RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDDDFVVALEHGLPPT 470

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+ ML   A ++R+V LFP
Sbjct: 471 AGEGLGIDRLAMLYANAPSIRDVILFP 497


>gi|310658261|ref|YP_003935982.1| lysine tRNA synthetase, inducible [Clostridium sticklandii DSM 519]
 gi|308825039|emb|CBH21077.1| lysine tRNA synthetase, inducible [Clostridium sticklandii]
          Length = 506

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 116/243 (47%), Gaps = 13/243 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           GS V L+G +  +R HG   F+DI+D  G  QV    D+    I     +++V    G +
Sbjct: 58  GSEVSLAGRIMSMRGHGKASFIDIQDEQGRIQVYVRQDA----IGDDSYTDFVTYDMGDI 113

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136
           +         N   G+  + A K+ +L+ + + LP    G ++    +R++ R++DL  +
Sbjct: 114 IGVEGTVFMTN--KGEQSVKASKVALLTKSLQILPEKYHGLKD--PDLRYRQRYVDLIVN 169

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
             + +  + R++ I +++  +   +F+E  TPIL T +    AR F+          Y +
Sbjct: 170 PDVKEAFLIRSKAIKALKEYLDERDFLEVDTPILSTIAGGATARPFITHHNTLDIDMY-M 228

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + Y + L+  GF+R +++   FR+E       P E+  +++  ++ + +DI+   E
Sbjct: 229 RIANELYLKRLIVGGFERVYELGKMFRNEGMSIKHNP-EYTAIEVYQAYADYEDIMRLTE 287

Query: 255 NVL 257
             +
Sbjct: 288 EAV 290



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR++MLL  + ++R+V LFP
Sbjct: 455 AIEVGLPPTGGLGIGIDRVIMLLTNSSSIRDVILFP 490


>gi|283788452|ref|YP_003368317.1| lysyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282951906|emb|CBG91624.1| lysyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 505

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 129/289 (44%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     I      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGIYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSVHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  K R++I+  +R  M+   F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 NTFKIRSQILAGIRQFMVGRGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295
           R + ++      V            F ++   +AI++Y   TD  +L N
Sbjct: 299 RTLAQDVLGTTQVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMAELDN 347



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F +   +K   ++    F   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFQDQVDAKAAGDDEAMFFDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|308389530|gb|ADO31850.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha710]
          Length = 503

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKIAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--QGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    ++ N         F R+   +AI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|20808736|ref|NP_623907.1| lysyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|254478749|ref|ZP_05092118.1| lysyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
 gi|39932223|sp|Q8R7N1|SYK_THETN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|20517378|gb|AAM25511.1| Lysyl-tRNA synthetase class II [Thermoanaerobacter tengcongensis
           MB4]
 gi|214035314|gb|EEB76019.1| lysyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
          Length = 499

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 30/285 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74
           G  V L+G +   R HG   F DI+D  G  Q+    D+     +EI K +    ++ + 
Sbjct: 60  GKTVTLAGRIMTKRSHGKASFADIQDRDGRIQIYVRYDNVGGKNYEIFKLLDIGDIIGVT 119

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
           G V             TG+I ++ +  ++L  + + LP    G ++    +R++ R++DL
Sbjct: 120 GEVFKTK---------TGEITINVKDFKLLCKSLQVLPEKWHGLKD--PDLRYRQRYVDL 168

Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             + ++ +  +KRT+II ++R  +    F+E  TP+L T +    AR F+          
Sbjct: 169 IINPSVREVFLKRTKIIKAIREFLDNRGFLEVETPVLHTIAGGAAARPFITHHNALDIDM 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  GF++ ++I   FR+E       P EF  L++  ++ +   ++ 
Sbjct: 229 Y-LRIALELHLKRLIVGGFEKVYEIGRVFRNEGMDIRHNP-EFTLLELYEAYTDYHGMME 286

Query: 252 TMENVLRGVFEEFSNGNT----------VSNNFLRICYDDAIRRY 286
             E +   V E+  NG+T          ++  + RI   DAI+ Y
Sbjct: 287 LTEQLFAYVAEKV-NGSTKIIYQGTEIDLTPPWKRITMVDAIKEY 330



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VM +  + ++R+V LFP
Sbjct: 458 ALEVGMPPTGGLGIGVDRLVMFMTDSYSIRDVILFP 493


>gi|300708164|ref|XP_002996267.1| hypothetical protein NCER_100652 [Nosema ceranae BRL01]
 gi|263511657|sp|C4V847|SYNC_NOSCE RecName: Full=Probable asparaginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|239605554|gb|EEQ82596.1| hypothetical protein NCER_100652 [Nosema ceranae BRL01]
          Length = 447

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/325 (21%), Positives = 128/325 (39%), Gaps = 47/325 (14%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y++    ++  SD+   ++  GWV   R    I F D+   +   + V       +E   
Sbjct: 17  YKSIELSEISKSDMHKRIKTFGWVDCCRTGKSITFFDLTCQFKSIKCV-------YEKKI 69

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +     L I G +    ++  NA     + E+  +K+EI + A     P+  E  +   
Sbjct: 70  DLTKCTSLTIYGTIQENKSKKENA-----EFEVLVEKLEIFNDAIAPSFPLNKESSF--D 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
              KY  L LR       +  R+ ++  +R      NFIE + P +  +  EG       
Sbjct: 123 TMMKYGHLALRNKQRGFFLKARSSLLKIIRDIFYEGNFIEITPPTIVQTQVEGGSTLFKL 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              ++ ++  L Q+ Q Y + +    + R + IA  +R E   + R   E+  ++ E++ 
Sbjct: 183 KYYDKDAY--LTQSSQLYLETVAPVAY-RAYCIASSYRAEKSNTTRHLSEYTHVEAELAN 239

Query: 244 VEQDDILNTMENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAIR---- 284
           +E +D++N +E++               ++ ++ E    N     F RI Y DAI+    
Sbjct: 240 IEFEDLINNIEHLVTESIKRFYDLLGDEIKDLYPEIKLQNVPKRPFKRIRYVDAIKFLND 299

Query: 285 -----------RYGTDKPDLRNPII 298
                        G D PD R  II
Sbjct: 300 EGVKKDDDTDFVVGDDIPDSREKII 324


>gi|85000937|ref|XP_955187.1| aspartyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65303333|emb|CAI75711.1| aspartyl-tRNA synthetase, putative [Theileria annulata]
          Length = 629

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 122/282 (43%), Gaps = 40/282 (14%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-----CFEIAKSVRSEWVLCIDGLV 77
           + G +H +R  GGI FL +R    + Q V +  S        +   ++  E ++ + G V
Sbjct: 47  IRGRIHELRGKGGICFLILRQQRELLQCVIDSKSENNTKDMVKWTSTLSFESIVDVYGKV 106

Query: 78  -------MSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPV-----FGEREYP--- 121
                  +S ++ +   N +    EL+  KI  +S +   LP  +         EY    
Sbjct: 107 VVPNMPILSTTSSSKLINFLLNLDELNVSKIFCISKSSTNLPFLLRDANNTDNEEYTNNP 166

Query: 122 ------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-----IAENFIECSTPILT 170
                 +  R   R LDLR      NI+ +   I S+ C++     ++ +FIE  TP L 
Sbjct: 167 NVIKVNQDTRLDNRALDLR--CFMNNIIFK---IQSIVCQLYREFLLSNDFIEIHTPKLL 221

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           + S EG           Q +   L Q+PQ YKQ+ +     R F+I P FR E+  + R 
Sbjct: 222 SGSSEGGSSVFKFKYFEQDA--CLAQSPQLYKQMAICGDLKRVFEIGPVFRAENSNTHRH 279

Query: 231 PGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVS 271
             E+  LD+EM       +++N ++ +L+ VF    N N ++
Sbjct: 280 LCEYVGLDLEMELKNNYMEVVNLIDEMLKFVFNGLKNSNEIN 321



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 4/88 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           +I +  YD    G EI SG  R H SE + +     GI    +++      + F+    P
Sbjct: 496 TIWSRSYDFFMRGEEILSGAQRIHDSEELEKRAKECGIDVNTIKDYI----QVFKYASFP 551

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           H G   G++R+VML LG  N+R+ S+FP
Sbjct: 552 HAGAGIGLERVVMLFLGLTNIRKTSMFP 579


>gi|238783658|ref|ZP_04627678.1| Lysyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238715371|gb|EEQ07363.1| Lysyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 505

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 126/278 (45%), Gaps = 21/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+  + D     +      +W L   G ++  
Sbjct: 68  VTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYNEEFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 RGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  K R+++++ +R  M+ + F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 NTFKVRSQVMSGIRSFMVEKGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E + 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286
           R + E     + V            F+++   +AI +Y
Sbjct: 299 RTLTENILGSSVVQYGEQTFDFGKPFVKLTMKEAICKY 336



 Score = 45.1 bits (105), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F++   +KE  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|189502178|ref|YP_001957895.1| asparaginyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|189497619|gb|ACE06166.1| hypothetical protein Aasi_0788 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 477

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 106/265 (40%), Gaps = 33/265 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
           VG+ V + GWV   R    ++F+ + D   I   Q+V  P+    +I + + +   L + 
Sbjct: 15  VGTKVCIKGWVRTKRISKQVVFIMLNDGSTIHNLQIVTEPEKFAEDIMQHIATGVSLSVC 74

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V++              IEL A  IEIL  A + PL     +    S+ F      LR
Sbjct: 75  GTVIASQGGN-------QAIELQADTIEILGTATDYPL-----QPKKHSLEFLREIAHLR 122

Query: 135 RDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             T   + V R R  I  ++      + F+   TPI+TA   EGA +    + +N     
Sbjct: 123 FRTNTFSAVFRIRHAISYAIHQFFHEQGFVYLHTPIITAVDAEGAGEMFSVTTLNMEQLP 182

Query: 193 ALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEFY 235
             PQ    +K+        L  SG              +   P FR E+  + R   EF+
Sbjct: 183 KTPQGQVDFKRDFFGQKTSLTVSGQLEAEAAALGLAEVYTFGPTFRAENSNTTRHLAEFW 242

Query: 236 QLDMEMSFVEQDDILNTMENVLRGV 260
            ++ EM+F +  D +   E  L+ V
Sbjct: 243 MVEPEMAFYDLADNIALAERFLKYV 267



 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + + +A  ++G++  +++       R F  G  PH G   G++R+V  
Sbjct: 400 EIIGGSQREERLDKLTEAIQSMGMNSNILQWYLDT--RLF--GTVPHSGFGLGLERLVQF 455

Query: 550 LLGAKNVREVSLFPMS 565
           + G  N+R+V  FP +
Sbjct: 456 VTGMDNIRDVIPFPRT 471


>gi|312877912|ref|ZP_07737856.1| lysyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795304|gb|EFR11689.1| lysyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 497

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 22/254 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GL 76
           G FV ++G +   R HG   F+DI D  G  Q+    D    E+ +    E+    D G 
Sbjct: 58  GKFVCVAGRMLSKRGHGKASFVDILDTKGKIQIYIKID----EVGEEKYEEFKEYYDIGD 113

Query: 77  VMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-- 133
           ++    E    +   G+I + A++IE+L+     LP    G R+     R++ R+LDL  
Sbjct: 114 IIGVKGEVFKTH--KGEISVKAKEIEMLTKCLRPLPEKWHGLRDI--DTRYRKRYLDLIV 169

Query: 134 ---RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQG 189
               RDT     +KR+ II S+R  +    F+E  TP+L+  +    AR F+        
Sbjct: 170 NPQVRDTF----IKRSLIIRSIRKFLDDRGFLEVETPVLSPVAGGAAARPFITHHNALDI 225

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A + + + L+  GFD+ +++   FR+E       P EF  +++  ++ +  ++
Sbjct: 226 DLY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIYQAYADYKEM 283

Query: 250 LNTMENVLRGVFEE 263
           +   E ++  V +E
Sbjct: 284 MELTEKLITTVAQE 297



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFP 491


>gi|302882325|ref|XP_003040073.1| hypothetical protein NECHADRAFT_96752 [Nectria haematococca mpVI
           77-13-4]
 gi|256720940|gb|EEU34360.1| hypothetical protein NECHADRAFT_96752 [Nectria haematococca mpVI
           77-13-4]
          Length = 812

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 124/267 (46%), Gaps = 22/267 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDH-YGITQVVA-NPDSA 57
           +H    ++   L    +G+ V     +   RP   ++ FL +RD  + +  V+A + D+A
Sbjct: 48  VHPGEINTVAQLDTLPIGTEVTFRARIETQRPLSKVLDFLLLRDQTHSVQGVLARDADNA 107

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F + +         + G ++ +  + I +   +G +E+    + +++ A+ LP   F  
Sbjct: 108 DFSLVQ---------VSG-ILKQPPQPIRSATHSG-VEVDICSVHLVNPAQNLP---FSN 153

Query: 118 REYPESIR--FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
            + PE++R     R LDLR  +       R+ +    R  +    F+E  TP L  ++ E
Sbjct: 154 YKPPETLRNRMSSRILDLRHPSNQALFRVRSMVSRVFRNTLEQYGFVEIHTPKLQPAATE 213

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                   +   + +F A  Q+PQ  KQ+ +++ F R F++ P FR E+  + R   E+ 
Sbjct: 214 SGAAVFPVNYFGRRAFLA--QSPQLAKQMSISADFGRVFEVGPVFRAENSNTHRHLTEYT 271

Query: 236 QLDMEMSF-VEQDDILNTMENVLRGVF 261
            LD+EM+   +  +++  ++  L+ VF
Sbjct: 272 GLDLEMAIDSDYHEVIQFIDIFLKEVF 298



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H  E +    +  G+S++ +E+       AF+ G PPH G   
Sbjct: 397 FDIFIRGQEICSGGQRIHNVEELRANMAAAGMSEDGMEDYLT----AFELGAPPHAGAGL 452

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++RIV  +L   +VR  SLF
Sbjct: 453 GLERIVAWMLELGDVRYASLF 473


>gi|4455210|emb|CAB36533.1| putative aspartate-tRNA ligase [Arabidopsis thaliana]
 gi|7269540|emb|CAB79542.1| putative aspartate-tRNA ligase [Arabidopsis thaliana]
          Length = 504

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 18/237 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCI 73
           VGS V + G +H+ R  G  +F+ +R+     Q V       +   +  K +  E V+ +
Sbjct: 84  VGSEVSIRGRLHKNRLVGTKLFVILRESGFTVQCVVEETRVGANMIKFVKQLSRESVVEL 143

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPV----FGEREYPES---IR 125
            G+V S   + +     T Q+E+  +K+  LS +   LPL V      E +  +S    R
Sbjct: 144 IGVV-SHPKKPLTGT--TQQVEIHVRKMYCLSRSLPNLPLVVEDAARSESDIEKSGKDTR 200

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R LD+R          + ++  + R  + ++ F+E  TP L A S EG        R
Sbjct: 201 LNNRVLDIRTPANQAIFRIQCQVQIAFREYLQSKGFLEIHTPKLIAGSSEGGSAVF---R 257

Query: 186 VN-QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           ++ +G    L Q+PQ +KQ+ +     R F++ P FR ED  + R   EF  LD+EM
Sbjct: 258 LDYKGQPACLAQSPQLHKQMAICGDMRRVFEVGPVFRAEDSFTHRHLCEFVGLDVEM 314



 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H  E++ +     GI  + +         AF+ G PPHGG   
Sbjct: 419 FDVFIRGEEIMSGAQRIHDPELLEKRARECGIDVKTISTYID----AFRYGAPPHGGFGV 474

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VMLL    N+R+ SLFP
Sbjct: 475 GLERVVMLLCALNNIRKTSLFP 496


>gi|73663548|ref|YP_302329.1| lysyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123761498|sp|Q49V26|SYK_STAS1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|72496063|dbj|BAE19384.1| lysyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 495

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 119/250 (47%), Gaps = 21/250 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  ++D  G  Q+    D      F I  S     ++ ++G++
Sbjct: 61  VSIAGRLMTKRGKGKAGFAHVQDLSGQIQIYVRKDQVGEDQFAIWNSADLGDIVGVEGVM 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--R 134
              +         TG++ + AQ   +L+ A   LP    G ++  +  R++ R+LDL   
Sbjct: 121 FKTN---------TGELSVKAQSFTLLTKALRPLPDKFHGLQDIEQ--RYRQRYLDLITN 169

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193
           +D+  +  +KR++I+  MR  +  + F+E  TP++   +    AR F+        + Y 
Sbjct: 170 QDST-QTFIKRSKILQEMRNYLNQQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLY- 227

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++  
Sbjct: 228 MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYHDIMDIT 286

Query: 254 ENVLRGVFEE 263
           EN++R + E+
Sbjct: 287 ENMIRHISEK 296



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVLLFP 490


>gi|327383534|gb|AEA55010.1| Lysyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327386727|gb|AEA58201.1| Lysyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 499

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 141/338 (41%), Gaps = 43/338 (12%)

Query: 2   HRY-RTHSCG----DLGVSDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH+      + G  D  +       V ++G +   R  G + F DIRD  G  Q+
Sbjct: 36  HRFDRTHTAAKVREEFGEDDKETLLDEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 95

Query: 51  VANPD---SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
               D      + I K      +L I G VM            T   EL+ +   +  +A
Sbjct: 96  YVRKDVVGDDNYMIFKKADLGDILGISGEVMK-----------TDSGELTVKANHVTHLA 144

Query: 108 EEL-PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           + L PLP           +++ R+LDL    D+  +  VKRT+I++++R  +    F+E 
Sbjct: 145 KALRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDR-FVKRTKIVSAVREYLDNNGFLEV 203

Query: 165 STPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP+L   +    AR F+          Y L  A + + + L+  G +R ++I   FR+E
Sbjct: 204 ETPVLHNQAGGANARPFVTHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNE 262

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------F 274
              +   P EF +L+   ++ +  D++   E + R    +  +   ++           F
Sbjct: 263 GIDTKHNP-EFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLTYQGMAIDLDAPF 321

Query: 275 LRICYDDAIR-RYGTD-KPDLRNPIIMHNVTEHFVHSE 310
            RI   DAI+ + G D  P++          EH VH E
Sbjct: 322 ARINMLDAIKDKTGVDFWPEMSVDDARKLADEHDVHYE 359



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 8/52 (15%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GI  + VE        A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 452 GIDDDYVE--------ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 495


>gi|187250480|ref|YP_001874962.1| lysyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186970640|gb|ACC97625.1| Lysyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 498

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 117/255 (45%), Gaps = 26/255 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWV 70
           +D+ + V +SG V ++R  G   F  IRD  G  Q  A  D+   E      K +     
Sbjct: 51  ADIDTQVTVSGRVVQLRLMGKAAFAHIRDFTGKVQFYAQKDTLGEENYNFFKKHISVGDF 110

Query: 71  LCIDG-LVMSRSAE-TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
           + + G + ++++ E TI A+ IT    L ++ I         P+P          IRF+ 
Sbjct: 111 VTVKGHMFLTKTGEKTIKADSIT----LISKAIR--------PMPEKWHGVQDTEIRFRN 158

Query: 129 RFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186
           R +DL  +   K I VKR++II+S+R  +    ++E  TP LT  +    AR F      
Sbjct: 159 RHVDLIANEDIKEIFVKRSKIISSIRKTLDGLGYLEVETPTLTPDAGGAIARPFETFHNA 218

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            +   Y +  A + Y + L+  G DR ++I   FR+E   +   P EF  +++  ++ + 
Sbjct: 219 LKMPLY-MRIALELYHKRLIVGGLDRIYEIGKMFRNEGIDTTHNP-EFTMMELYQAYGD- 275

Query: 247 DDILNTMENVLRGVF 261
              +NTM +V   V 
Sbjct: 276 ---VNTMADVFEAVL 287



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR++MLL G  ++RE+  FP+
Sbjct: 457 ALESGMPPTGGMGIGIDRMIMLLTGQDSIREIVFFPL 493


>gi|47230424|emb|CAF99617.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 545

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 135/282 (47%), Gaps = 30/282 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACF 59
           + +Y     GD  ++DV   ++++G VH  R  G  ++F D+R      QV+AN      
Sbjct: 76  IEKYNNLQPGD-QLTDV---IKVAGRVHAKRVSGAKLLFYDLRGEGVKLQVMAN------ 125

Query: 60  EIAKSVRSE-WVLCIDGLVMSRSAETIN-----ANIITGQIELSAQKIEILS-VAEELPL 112
             +++ +SE   + I+  +  R  + I           G++ +   ++ +LS     LP 
Sbjct: 126 --SRNYKSEEQFMAINNKL--RRGDIIGVCGNPGKTKKGELSIIPNEMILLSPCLHMLPH 181

Query: 113 PVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
             FG ++  +  R++ R+LDL   D++ +  + R++II  +R  +    F+E  TP++  
Sbjct: 182 LHFGLKD--KETRYRQRYLDLILNDSVRQKFITRSKIITYVRSFLDQMGFLEIETPMMNI 239

Query: 172 SSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             P GA  R F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E      
Sbjct: 240 I-PGGAVARPFVTYHNELDMNLY-MRIAPELYHKMLVVGGVDRVYEIGRQFRNEGIDMTH 297

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
            P EF   +  M++ +  D++   E +L G+ ++ + G  ++
Sbjct: 298 NP-EFTTCEFYMAYADYHDLMEITERLLSGMVKQITGGYKIT 338



 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 502 ALEYGLPPTAGWGMGIDRLAMFLTDSNNIKEVLLFP 537


>gi|331701912|ref|YP_004398871.1| Lysyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329129255|gb|AEB73808.1| Lysyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 501

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 129/279 (46%), Gaps = 24/279 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F D++D  G  Q+    D    +I    +   +    G  +  
Sbjct: 61  VTIAGRMIAKRGKGKVGFADLKDRTGKIQIYVRKDIVGDDIYHIFKRSDI----GDHLGI 116

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--RRDT 137
           S + I  ++  G++ + A+ +  LS A   LP    G ++  +  R++ R+LDL   +D+
Sbjct: 117 SGQIIKTDM--GELTVRAESVTFLSKALRPLPDKFHGLKDKEQ--RYRQRYLDLISNQDS 172

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYALPQ 196
             +  VKRT+I++++R  + + ++ E  TP+L  S+    AR F+          Y L  
Sbjct: 173 FDR-FVKRTKIVSAVRKYLDSNDYQEVETPVLHNSAGGANARPFITHHNALNIDLY-LRI 230

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  L+  +++ +  D+++  E +
Sbjct: 231 ALELHLKRLIVGGLERVYEIGRVFRNEGMDTRHNP-EFTMLESYVAYYDFHDVMDETEGI 289

Query: 257 LRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            +      ++ N V+           F R    DAI+ Y
Sbjct: 290 FKAAAAAVTDDNVVTYQGHTVDLNKPFKRQHMVDAIKEY 328



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 8/52 (15%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GI ++ +E        A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 447 GIDEDYIE--------ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVILFP 490


>gi|329118329|ref|ZP_08247038.1| lysine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465553|gb|EGF11829.1| lysine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 580

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 30/282 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  ++D  G  Q+  N +    E A      W +   G ++  
Sbjct: 145 VKIAGRMMLKRAMGKASFATVQDVSGQIQLYIN-NQGVGEAAHEDFKHWDM---GDIVGA 200

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----RR 135
                  N   G++ +    I +LS +   PLP   +    + ++++ R++DL      R
Sbjct: 201 EGTLFKTN--HGELTVRVSNIRLLSKSLR-PLPDKHKGLADQEVKYRQRYVDLIVSPESR 257

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
           DT     +KR++II ++R  M+ E ++E  TP++    P G  A+ F+          Y 
Sbjct: 258 DTF----IKRSKIIQTVRNYMVGERYLEVETPMMH-PIPGGASAKPFVTHHNALDMPLY- 311

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F   + ++   
Sbjct: 312 LRIAPELYLKRLIVGGLERVFEINRSFRNEG-MSTRHNPEFTMMEFYEAFCTYERMMQMT 370

Query: 254 ENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           E V+R   +       +S N         F R+   +AI++Y
Sbjct: 371 EGVIRACAQAVCGTAKISYNGKEVDLESPFERLTILEAIKKY 412



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   G+DR+VMLL  A ++R+V LFP
Sbjct: 539 RAMEYGLPPTGGSGIGLDRLVMLLTDAPSIRDVILFP 575


>gi|191639442|ref|YP_001988608.1| Lysyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|239630366|ref|ZP_04673397.1| lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|190713744|emb|CAQ67750.1| Lysyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|239526649|gb|EEQ65650.1| lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 498

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 141/338 (41%), Gaps = 43/338 (12%)

Query: 2   HRY-RTHSCG----DLGVSDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH+      + G  D  +       V ++G +   R  G + F DIRD  G  Q+
Sbjct: 35  HRFDRTHTAAKVREEFGEDDKETLLDEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 94

Query: 51  VANPD---SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
               D      + I K      +L I G VM            T   EL+ +   +  +A
Sbjct: 95  YVRKDVVGDDNYMIFKKADLGDILGISGEVMK-----------TDSGELTVKANHVTHLA 143

Query: 108 EEL-PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           + L PLP           +++ R+LDL    D+  +  VKRT+I++++R  +    F+E 
Sbjct: 144 KALRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDR-FVKRTKIVSAVREYLDNNGFLEV 202

Query: 165 STPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP+L   +    AR F+          Y L  A + + + L+  G +R ++I   FR+E
Sbjct: 203 ETPVLHNQAGGANARPFVTHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNE 261

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------F 274
              +   P EF +L+   ++ +  D++   E + R    +  +   ++           F
Sbjct: 262 GIDTKHNP-EFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLTYQGMAIDLDAPF 320

Query: 275 LRICYDDAIR-RYGTD-KPDLRNPIIMHNVTEHFVHSE 310
            RI   DAI+ + G D  P++          EH VH E
Sbjct: 321 ARINMLDAIKDKTGVDFWPEMSVDDARKLADEHDVHYE 358



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 8/52 (15%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GI  + VE        A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 451 GIDDDYVE--------ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 494


>gi|154505279|ref|ZP_02042017.1| hypothetical protein RUMGNA_02793 [Ruminococcus gnavus ATCC 29149]
 gi|153794477|gb|EDN76897.1| hypothetical protein RUMGNA_02793 [Ruminococcus gnavus ATCC 29149]
          Length = 655

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 130/287 (45%), Gaps = 30/287 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            G  V ++G +   R  G   F +++D  G  Q     DS   E  K  +   V    G 
Sbjct: 67  AGKEVSIAGRMMSKRVMGKASFCNVQDLQGNIQSYVARDSIGEEAYKEFKKMDV----GD 122

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V+  + E       TG+  + A  + +LS + ++ LP          IR++ R++DL  +
Sbjct: 123 VIGITGEVFETK--TGEKSIHASSVTLLSKSLQI-LPEKFHGLTNTDIRYRQRYVDLIMN 179

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             + +  + R++I++++R  +  + F+E  TP+L +++   A      +R  +  F AL 
Sbjct: 180 PDVKQTFINRSKILSAIRRYLDGQGFLEVETPMLVSNAGGAA------ARPFETHFNALD 233

Query: 196 Q------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + +
Sbjct: 234 EDFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGM 292

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           ++  EN+ R V +E      +  N         F RI   DA+++Y 
Sbjct: 293 MDLTENLYRHVAQEVLGTTVIEYNGVQMDLGKPFERITMVDAVKKYA 339



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+ MLL  +  +R+V LFP
Sbjct: 465 ALEIGMPPTGGIGFGIDRMCMLLTNSAAIRDVLLFP 500


>gi|39996258|ref|NP_952209.1| asparaginyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|59798572|sp|Q74E08|SYN_GEOSL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|39983138|gb|AAR34532.1| asparaginyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298505271|gb|ADI83994.1| asparaginyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 461

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 108/266 (40%), Gaps = 29/266 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69
           L  +  G+ V + GWV   R   G+ FL + D   +   QVVA P  A +   + + +  
Sbjct: 11  LAGTPAGTEVIVKGWVRTSRVGKGVAFLAVNDGSCLASLQVVAEPGLANYHELRGIGTGA 70

Query: 70  VLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            + + G+V    A         GQ +EL A K+ ++  A+E   P+  +R   E +R   
Sbjct: 71  AVAVRGIVAESPA--------AGQAVELHATKVVVVGGADE-QYPLQKKRHTFEYLR-TI 120

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +T       R+ +  ++        F+   TPI+T S  EGA +    + ++ 
Sbjct: 121 AHLRPRSNTFGAVFRVRSSLAQAVHRFFAERGFLYVHTPIITTSDCEGAGELFRVTTLDP 180

Query: 189 GS-------------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPG 232
            +             F+A         QL   L A  F   +   P FR E+  + R   
Sbjct: 181 SAPPMADGAVDFSQDFFAAQAGLTVSGQLEGELFAQAFSDIYTFGPTFRAENSNTPRHAA 240

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLR 258
           EF+ ++ EM+F +  D     E+  R
Sbjct: 241 EFWMIEPEMAFADLRDDAALAEDFFR 266


>gi|147898923|ref|NP_001080050.1| lysyl-tRNA synthetase [Xenopus laevis]
 gi|28302358|gb|AAH46578.1| Kars-prov protein [Xenopus laevis]
          Length = 605

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 24/279 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACF 59
           + +Y +   G+     +   + ++G +H  R  G  +IF D+R      QV+AN  S  +
Sbjct: 122 IQKYNSLQTGE----QLSEVISVAGRIHAKRISGAKLIFYDLRGEAAKLQVMAN--SKFY 175

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINAN---IITGQIELSAQKIEILS-VAEELPLPVF 115
           ++      E    I+  +       +  N      G++ +   +I +LS     LP   F
Sbjct: 176 KL-----EEEFTAINNRLRRGDLIGVKGNPGKTKKGELSIIPHEITLLSPCLHMLPHLHF 230

Query: 116 GEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
           G ++  +  RF+ R+LDL   D + +  + R ++I  +R  +    F+E  TP++    P
Sbjct: 231 GLKD--KETRFRQRYLDLILNDYVRQKFIVRAKLITYLRKFLDNLGFLEIETPMMNVI-P 287

Query: 175 EGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
            GA  + F+          Y +  AP+ Y ++L+  G DR ++I   FR+E       P 
Sbjct: 288 GGAVAKPFITHHNELDMKLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP- 345

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           EF   +  M++ + +D++   E +L G+ +  + G  V+
Sbjct: 346 EFTTCEFYMAYADYNDLMEITEKLLSGMVKHITGGYKVT 384



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 548 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 583


>gi|304387240|ref|ZP_07369437.1| lysine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304338728|gb|EFM04841.1| lysine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|325128487|gb|EGC51366.1| lysyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 503

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKIAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    ++ N         F R+   +AI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  E   + F +    K+  ++    +   Y RA + G+PP 
Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|257899976|ref|ZP_05679629.1| lysyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|293571081|ref|ZP_06682122.1| lysyl-tRNA synthetase [Enterococcus faecium E980]
 gi|257837888|gb|EEV62962.1| lysyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|291608864|gb|EFF38145.1| lysyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 498

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 134/306 (43%), Gaps = 40/306 (13%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L           ++++G    ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSEELHELFDPRTKEELAEMGLTASVAGRMMTRRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSA---CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EEL 110
           D      +E+ K         + G +M            TG++ + A +I ILS A   L
Sbjct: 100 DQVGDEAYEVFKHADLGDFFGVTGQIMKTD---------TGEVSIKASEITILSKALRPL 150

Query: 111 PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
           P    G     +  R++ R+LDL   R++  +  +KR++II+ +R  +    +IE  TP+
Sbjct: 151 PDKYHGLTNIEQ--RYRQRYLDLISNRESFDR-FMKRSQIISEIRRYLDGNGYIEVETPV 207

Query: 169 L-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L   +    AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +
Sbjct: 208 LHNEAGGAAARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDT 266

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLR-------GVFEEFSNGNTV--SNNFLRIC 278
              P EF  L+   ++ + +D++N  E ++R       G  +   +G  V   ++F RI 
Sbjct: 267 THNP-EFTMLEAYTAYTDFNDVMNLTEGIIRNAAQKVLGTAKITYDGQAVDLESDFKRIH 325

Query: 279 YDDAIR 284
             DAI+
Sbjct: 326 MVDAIK 331



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP
Sbjct: 460 ALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495


>gi|157373980|ref|YP_001472580.1| lysyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189082971|sp|A8FRH9|SYK_SHESH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157316354|gb|ABV35452.1| lysyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 500

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 37/277 (13%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           FL I+D  G  Q  A  D     + K +++++     G ++           +TGQ+ LS
Sbjct: 76  FLVIQDVSGRIQAYAGKD-----VQKDLKAKFQGLDIGDIIG----------VTGQLHLS 120

Query: 98  AQKIEILSVAEELPLPVFGEREYPESI--------RFKYRFLDL-RRDTLHKNIVKRTRI 148
             K ++    EE  L     R  PE          R++ R++DL   +   +  + R+++
Sbjct: 121 G-KGDLYVNMEEYELLTKALRPLPEKFHGLTDQETRYRQRYIDLIVNEESREAFIMRSKV 179

Query: 149 INSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           ++++R  M+ + F+E  TP++ T      AR F         + Y L  AP+ Y + L+ 
Sbjct: 180 VSAIRNFMVKKEFMEVETPMMHTIPGGASARPFETHHNALDIAMY-LRIAPELYLKRLVV 238

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            GF+R F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  +  E    
Sbjct: 239 GGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYSDYKDLMDLTEEMLSSIATELCGS 297

Query: 268 NTV---------SNNFLRICYDDAIRRYGTDKPDLRN 295
             +            + R+   DAI++Y  D   +++
Sbjct: 298 PKLPYGEHVVDFGGPYARLSMLDAIKKYNPDNATIQS 334



 Score = 41.2 bits (95), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|71656145|ref|XP_816624.1| lysyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70881765|gb|EAN94773.1| lysyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 659

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 157/354 (44%), Gaps = 58/354 (16%)

Query: 10  GDLGVSD--VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-----PDSACFEIA 62
           G LG  D    + VR++G V  VR  G IIF+ IR +    QVV             ++ 
Sbjct: 97  GYLGSGDRAAQATVRVAGRVTSVRDIGKIIFVTIRSNGNELQVVGQVGENFTREDLKKLK 156

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
            S+R   ++  DG         +   +  G++ ++A ++ ILS     +++  P    R 
Sbjct: 157 VSLRVGDIIGADG---------VPCRMQRGELSVAASRMLILSPYVCTDQVVCPNL--RG 205

Query: 120 YP----ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASS 173
           +       ++++YRF D+  +  + + I KR  ++ ++R      NF+E  TP+L T +S
Sbjct: 206 FAVLQDNDVKYRYRFTDMMTNPCVIETIKKRHVMLQALRDYFNERNFVEVETPVLHTVAS 265

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+     N    + L  AP+ + +  +  G +R ++I   FR+ED      P E
Sbjct: 266 GANAKSFVTHHNANAMDLF-LRVAPELHLKQCIVGGMERIYEIGKVFRNEDADRSHNP-E 323

Query: 234 FYQLDMEMSFVEQDDILNTMENV------------LRGVFEEFSNGNTVSNN----FLRI 277
           F   +   ++   +D++   E++            +  ++ E ++GN V+ +    F R+
Sbjct: 324 FTSCEFYAAYHTYEDLMPMTEDIFLQLAMRVNGTTVVQIYPENAHGNPVTVDLGKPFRRV 383

Query: 278 -CYDDAIRRYGTDKP---DLRNP---------IIMHNVTEHFVHSEFRVFSKIL 318
             YD+  R  G + P   +L  P         ++ +N+    V +  ++F K++
Sbjct: 384 SVYDEIQRMSGVEFPPPNELNTPKGIAYMSVVMLRYNIPLPPVRTAAKMFEKLI 437



 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 25/38 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           ++ Q G+PP  G   GIDR +MLL  + N+R+  +FP+
Sbjct: 524 KSLQVGLPPTAGWGMGIDRALMLLTNSSNIRDGIIFPL 561


>gi|71408438|ref|XP_806623.1| aspartyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70870422|gb|EAN84772.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 261

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI+SG  R H S ++L+   ++G+    +++       +F+ G  PHGG   
Sbjct: 176 YDMFIRGEEISSGAQRIHDSSLLLKRAQSLGVDLSPIKDYVD----SFRLGAWPHGGFGV 231

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  NVR VSLFP
Sbjct: 232 GLERVVMLYLGLSNVRLVSLFP 253


>gi|148679578|gb|EDL11525.1| mCG141545, isoform CRA_b [Mus musculus]
          Length = 606

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ ++
Sbjct: 135 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 194

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +  Q+I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 195 G---------NPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 243

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 244 ILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 302

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 303 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 360

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E +L G+ +  +    ++
Sbjct: 361 EITEKMLSGMVKSITGSYKIT 381



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 545 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 580


>gi|1483209|emb|CAB01404.1| aspartyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 68

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/64 (46%), Positives = 42/64 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPHGGIA G DR+ MLLLG  ++R+   FP  ++    L  +PS V  +QLREL
Sbjct: 1   AFKYGTPPHGGIAYGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLREL 60

Query: 588 GLRI 591
            +++
Sbjct: 61  HIKV 64


>gi|168183599|ref|ZP_02618263.1| lysine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796980|ref|YP_002864532.1| lysyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182673242|gb|EDT85203.1| lysine--tRNA ligase [Clostridium botulinum Bf]
 gi|229262564|gb|ACQ53597.1| lysine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 504

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 128/304 (42%), Gaps = 37/304 (12%)

Query: 5   RTHSCGDL--GVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++     D+ G  V ++G +   R HG   F DI D YG  Q+    +    E 
Sbjct: 44  RTHTSKEVKENYEDLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103

Query: 62  AKSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            K  ++     ++ + G V        + +I   Q+   + +          PLP     
Sbjct: 104 LKEYKTFDIGDIISVTGTVFKTKTGETSIHITDFQLVCKSLR----------PLPEKWHG 153

Query: 119 EYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                +R++ R++DL      RDT     +KRT II +MR  +    F+E  TPIL+  +
Sbjct: 154 LKDPDLRYRQRYVDLIINQDVRDTF----IKRTAIIKAMREFLDNRGFLEVETPILSPIA 209

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+          Y L  A + Y + L+  GF++ ++I   FR+E       P 
Sbjct: 210 GGAAAKPFITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283
           EF  +++  ++ + +D++   EN++  + E+      V            + R+   DA+
Sbjct: 268 EFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEIDFTPPWRRLTMVDAV 327

Query: 284 RRYG 287
           + Y 
Sbjct: 328 KEYA 331



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + GMPP GG+  GIDR++M L    ++R+V LFP
Sbjct: 460 SLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFP 495


>gi|71897197|ref|NP_001026571.1| asparaginyl-tRNA synthetase, cytoplasmic [Gallus gallus]
 gi|53132771|emb|CAG31935.1| hypothetical protein RCJMB04_13p14 [Gallus gallus]
          Length = 559

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/250 (22%), Positives = 108/250 (43%), Gaps = 26/250 (10%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GW+HR+R  G  ++F+ +RD  G  Q V + D+ C             C +GL
Sbjct: 136 GQRVKIFGWIHRLRRQGKNLMFIVLRDGTGFLQCVLS-DALC------------QCYNGL 182

Query: 77  VMSRSAETINANIIT---------GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           ++S  +      ++          G  EL+    E++ +A           +    ++  
Sbjct: 183 LLSTESSVAVYGMLNLVPEGKQAPGGHELNCDYWELIGLAPAGGADNLLNEDSEVDVQLN 242

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K    R+ ++ + R    A  + E + P L  +  EG           
Sbjct: 243 NRHMMIRGENMSKIFKVRSMVVQAFRDHFFANGYYEVTPPTLVQTQVEGGSTLFKLDYFG 302

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + ++  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  +
Sbjct: 303 EEAY--LTQSSQLYLETCIPALGD-VFCIAQSYRAEQSRTRRHLAEYTHIEAECPFISFE 359

Query: 248 DILNTMENVL 257
           D+LN +E+++
Sbjct: 360 DLLNRLESLV 369


>gi|255731872|ref|XP_002550860.1| asparaginyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240131869|gb|EER31428.1| asparaginyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 552

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 104/245 (42%), Gaps = 21/245 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + GWVHR+R   G+ F+ +RD  G  Q V   D A     + +  E  + I G V+S+
Sbjct: 130 VLVQGWVHRLRVQKGLAFITLRDGTGYLQCVLTGDLAKARQTQELTIESTVAIKG-VISK 188

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR--------FKYRFLD 132
             E   A    G +EL A   EI+++A        G+  +   I+           R L 
Sbjct: 189 LPEGKTA---PGGVELKADFYEIIALAPS------GDDSFTNRIQEGADPNLLLDQRHLT 239

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +TL   +  R     ++R     E   E + P +  +  EG           + ++ 
Sbjct: 240 LRGETLSAVMKVRAAYSAAIRRFYAEEGITEVTPPCMVQNQVEGGSTLFKLDYYGEEAY- 298

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  + +  D  F I   FR E   + R   E+  ++ E+ F+   D+L+ 
Sbjct: 299 -LTQSSQLYLETCLPALGD-VFCIQESFRAEKSHTRRHLSEYTHIEAELVFITFHDLLDH 356

Query: 253 MENVL 257
           +E +L
Sbjct: 357 LERLL 361


>gi|194365604|ref|YP_002028214.1| lysyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194348408|gb|ACF51531.1| lysyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 503

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 124/279 (44%), Gaps = 20/279 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCI 73
           G  V+++G +   R  G   F  I+D  G  Q+           A +    W    ++ +
Sbjct: 65  GRQVKMAGRLMAKRIMGKASFAQIQDESGRIQLFLQ--GTVLGDAYTAFKGWDVGDIIAV 122

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           +G  ++R+         TG++ + A+ I +L+ +   PLP           R++ R++DL
Sbjct: 123 EG-GLTRTK--------TGELSVKAESIRLLTKSLR-PLPDKWHGLADVEQRYRQRYVDL 172

Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF 191
                 + + +KR++II +MR  +   +F+E  TP++        A+ F           
Sbjct: 173 IVTPESRAVFIKRSKIIRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDL 232

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L   G +R ++I   FR+E   +   P EF  +++  ++   ++I++
Sbjct: 233 Y-LRVAPELYLKRLTVGGLERVYEINRNFRNEGVSTRHNP-EFTMMELYEAYATYNEIMD 290

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
             E V+R V    + G  V  +  +I    A RR+  D+
Sbjct: 291 LTEGVIRDVATTVNGGTEVEWDGAKIDLGPAFRRWRMDE 329



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L  NG E+A+G    +  E   Q F     +KE  ++    +   Y RA + GM P 
Sbjct: 411 RFELFVNGKELANGFSELNDPEDQAQRFQAQVAAKEGGDDEAMHYDADYIRALEYGMAPT 470

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG+  G+DR+VMLL G+ ++R+V LFP
Sbjct: 471 GGLGIGVDRLVMLLTGSSSIRDVLLFP 497


>gi|327534065|gb|AEA92899.1| lysine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 498

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 121/267 (45%), Gaps = 21/267 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59
           +Y  H+  +L  S++ + V ++G +   R  G   F  ++D  G  Q+    D      +
Sbjct: 50  QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+ K         + G VM  +         TG++ + AQ I +L+ A   PLP      
Sbjct: 108 ELFKHADLGDFFGVTGQVMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157

Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                R++ R+LDL   +++  +  +KR++II+ +R  +    ++E  TP+L   +    
Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P EF  
Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263
           L+   ++ +  D+++  E ++R   E+
Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNATEK 301



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL  A+++R+V LFP
Sbjct: 460 ALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495


>gi|325205820|gb|ADZ01273.1| lysyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 503

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    ++ N         F R+   +AI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|149409811|ref|XP_001510627.1| PREDICTED: similar to asparaginyl-tRNA synthetase [Ornithorhynchus
           anatinus]
          Length = 568

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 112/289 (38%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++F+ +RD  G  Q V             +  E   C +G+
Sbjct: 145 GQRVKVFGWVHRLRRQGKNLMFVVLRDGTGYLQCV-------------LSDELCQCYNGV 191

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 192 VLSTESSVAVYGTLKLTPKGKQAPGGHELSCDYWELIGLAPAGGADNLINEESDVDVQLN 251

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K    R+ +    R       + E + P L  +  EG           
Sbjct: 252 NRHMMIRGENMSKIFKARSAVTRCFREHFFDRGYCEITPPTLVQTQVEGGATLFKLDYFG 311

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  D
Sbjct: 312 EEAF--LTQSSQLYLETCIPALGD-VFCIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFD 368

Query: 248 DILNTMENVLRGVFEEFSNGNTVS-------------NNFLRICYDDAI 283
           D+LN +E+++  V +        S               F R+ Y DAI
Sbjct: 369 DMLNRLEDLVCDVVDRVLKSPAASLVYDLNPGFKPPKRPFKRMNYSDAI 417


>gi|313667866|ref|YP_004048150.1| lysyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313005328|emb|CBN86761.1| lysyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 503

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    ++ N         F R+   +AI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|307286953|ref|ZP_07567028.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306501899|gb|EFM71188.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0109]
          Length = 498

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 121/267 (45%), Gaps = 21/267 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59
           +Y  H+  +L  S++ + V ++G +   R  G   F  ++D  G  Q+    D      +
Sbjct: 50  QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+ K         + G VM  +         TG++ + AQ I +L+ A   PLP      
Sbjct: 108 ELFKHADLGDFFGVTGQVMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157

Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                R++ R+LDL   +++  +  +KR++II+ +R  +    ++E  TP+L   +    
Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P EF  
Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263
           L+   ++ +  D+++  E ++R   E+
Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNAAEK 301



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL  A+++R+V LFP
Sbjct: 460 ALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495


>gi|238896430|ref|YP_002921168.1| lysyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|262042531|ref|ZP_06015688.1| lysine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|330010997|ref|ZP_08306941.1| lysine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|238548750|dbj|BAH65101.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259040091|gb|EEW41205.1| lysine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|328534334|gb|EGF60945.1| lysine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 505

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 130/290 (44%), Gaps = 25/290 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G +++ 
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGVYNDQFKKWDL---GDIIAA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL   D   
Sbjct: 125 RGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           K    R++I+  +R  M+   F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 KTFKVRSQILAGIRQFMVGRGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298

Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY--GTDKPDLRN 295
           R + ++   GNT              F ++   +AI++Y   T+  DL N
Sbjct: 299 RTLAQDIL-GNTEVPYGDQVFDFGKPFEKLTMREAIKKYRPETEMADLDN 347



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|117617708|ref|YP_857858.1| lysyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|166229790|sp|A0KNK7|SYK_AERHH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|117559115|gb|ABK36063.1| lysyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 511

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 26/293 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           ++ +G  V+++G +   R  G   F  ++D  G  QV    D            +W L  
Sbjct: 62  LAALGKRVKIAGRIMTRRIMGKASFATLQDMAGKIQVYVTRDDLPEGFYNEQFKKWDL-- 119

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++         N  TG++ +    I +L+ A   PLP   +    +  R + R+LDL
Sbjct: 120 -GDIVGVEGTLFRTN--TGELSVHVSDIRLLTKALR-PLPEKHKGLTDQEARCRQRYLDL 175

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              +   K  V RT+++  +R  +  + F+E  TP++    P GA  R F+         
Sbjct: 176 IANEESRKTFVTRTKVVAGIRKFLNDKRFMEVETPMMQVI-PGGASARPFITHHNALDID 234

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R ++I   FR+E   S R   EF  L+  M++ +  D++
Sbjct: 235 MY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGI-SVRHNPEFTMLEFYMAYADYIDLM 292

Query: 251 NTMENVLRGVFE------------EFSNGNTVS--NNFLRICYDDAIRRYGTD 289
           +  E +LR + +            E   G T+     F R+   D+I +Y  D
Sbjct: 293 DLTEEMLRTLAQDILGDTKIRYAKEGEEGLTIDFGQPFQRLSMVDSILKYNPD 345



 Score = 42.0 bits (97), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   +  +R+V LFP
Sbjct: 470 ALEHGLPPTAGQGIGIDRLVMLFTNSHTIRDVILFP 505


>gi|172056108|ref|YP_001812568.1| lysyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171988629|gb|ACB59551.1| lysyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 497

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 120/257 (46%), Gaps = 19/257 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77
           V ++G V   R  G + F +++D  G  Q+    D      +EI K+       C  G +
Sbjct: 61  VSIAGRVMTTRRKGKVGFTNVQDVNGQIQLYVRKDDVGEEAYEIYKT-------CDLGDI 113

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +  S      N+  G++ +      +L+ A   LP    G ++  +  R++ R+LDL  +
Sbjct: 114 VGISGYVFKTNV--GELSVHVTSFTLLTKALRPLPDKYHGLKDVEQ--RYRQRYLDLITN 169

Query: 137 TLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
           T  +   + R+++I  +R  + +  ++E  TP+L T +    AR F+        + Y +
Sbjct: 170 TESRETFIARSKVIRGIRQYLDSLGYLEVETPMLHTIAGGASARPFITHHNALDMTLY-M 228

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + +DI+N  E
Sbjct: 229 RIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP-EFTMIELYEAYADYNDIMNLTE 287

Query: 255 NVLRGVFEEFSNGNTVS 271
           N++  V +E      V+
Sbjct: 288 NLIAHVAQEVLGTTQVT 304



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFP 490


>gi|23097543|ref|NP_691009.1| lysyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|39932206|sp|Q8EU10|SYK_OCEIH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|22775766|dbj|BAC12044.1| lysine-tRNA ligase [Oceanobacillus iheyensis HTE831]
          Length = 493

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 130/278 (46%), Gaps = 23/278 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SA 57
           + +Y ++S  +L   +    V ++G +   R  G   F  I+D  G  Q+    D     
Sbjct: 41  IEKYDSYSKEEL--EETTDEVTIAGRLMTKRGKGKAGFAHIQDLSGQIQLYVRKDMIGDD 98

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFG 116
            +E+ KS     ++ + G++   +          G+I + A++ ++L+ +   LP    G
Sbjct: 99  AYEVFKSADLGDIVGVTGVMFKTNV---------GEISVKAKQFQLLTKSLRPLPEKYHG 149

Query: 117 EREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
            ++  +  R++ R+LDL  +   +   V R++II SMR  +  + F+E  TP++  S P 
Sbjct: 150 LKDIEQ--RYRQRYLDLITNPDSRGTFVSRSKIIQSMREYLNGQGFLEVETPMM-HSIPG 206

Query: 176 G--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           G  AR F+          Y +  A + + + LM  G ++ ++I   FR+E   +   P E
Sbjct: 207 GASARPFITHHNALDIELY-MRIAIELHLKRLMVGGLEKVYEIGRVFRNEGVSTRHNP-E 264

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           F  +++  ++ +  DI+   EN++  + ++     T++
Sbjct: 265 FTMIELYEAYADYHDIMELTENLVAHIAKQVHGSTTIT 302



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 453 ALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFP 488


>gi|303236532|ref|ZP_07323117.1| asparagine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483280|gb|EFL46290.1| asparagine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 463

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 115/274 (41%), Gaps = 32/274 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  +D G  + + GWV   R    + F+ + D   I   QVV +P+S   E  
Sbjct: 3   RTKVVDALSCTDFGKDINVRGWVRSHRSSKAVDFIALNDGSTIKNIQVVVDPNSMDAETL 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVA-EELPLPVFGER-E 119
           KS+ +   + ++G+++    +        GQ  E+  ++IEI  +   + P+   G+  E
Sbjct: 63  KSITTGACISVNGVLVESQGK--------GQTSEIQCKEIEIYGLCPSDYPMQKKGQSFE 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           Y      KY  + LR +T       R  +  ++        F    TP++T S  EGA +
Sbjct: 115 YMR----KYGHMRLRTNTFGAVFRIRHHMAMAIHQYFHEHGFYYFHTPLITGSDAEGAGN 170

Query: 180 FLVPSRVN------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDED 224
               + ++               F+          QL   L A+     +   P FR E+
Sbjct: 171 MFQVTTLDLDRVAKAGEVDYNADFFGKKTHLTVSGQLEGELGATSLGAIYTFGPTFRAEN 230

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             + R   EF+ ++ E++F++Q ++++  E+ ++
Sbjct: 231 SNTPRHLAEFWMVEPEVAFIDQQELMDLEEDFIK 264



 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    E +L    + G+ +EV    +       + G  PHGG   G +R+++ 
Sbjct: 386 EIIGGSVREESYEKLLNEIQSRGMKEEV----YDWYLDTRKYGTCPHGGFGLGFERLILF 441

Query: 550 LLGAKNVREVSLF 562
           + G +N+R+V  F
Sbjct: 442 VTGMQNIRDVIPF 454


>gi|210623237|ref|ZP_03293676.1| hypothetical protein CLOHIR_01626 [Clostridium hiranonis DSM 13275]
 gi|210153774|gb|EEA84780.1| hypothetical protein CLOHIR_01626 [Clostridium hiranonis DSM 13275]
          Length = 508

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 120/258 (46%), Gaps = 20/258 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCID 74
           G  V+++G +   R  G   F+DI+D  G  Q     D      + I K+     ++ I+
Sbjct: 63  GETVKIAGRMMSKRIQGKAGFIDIQDAEGRIQSYVRKDRLGDEEYTIFKTYDIGDIVGIE 122

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           G V              G+I + A K+ +LS + + LP    G ++  + +R++ R++DL
Sbjct: 123 GEVFITK---------RGEISVKADKVTLLSKSLQILPEKYHGLKD--QELRYRQRYVDL 171

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +   K+  + RT+ + ++R  +    F+E  TPIL T +    AR F+          
Sbjct: 172 IVNPEVKDAFITRTKALKALRSYLDERGFLEVETPILNTIAGGANARPFITHHNTLHIPM 231

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + Y + L+  GFD+ +++   FR+E       P E+  +++  ++ +  D++ 
Sbjct: 232 Y-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDMKHNP-EYTAIELYQAYADFTDMME 289

Query: 252 TMENVLRGVFEEFSNGNT 269
             EN++     E + G+T
Sbjct: 290 IAENLI-AHMAEVATGST 306



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR++MLL  + ++R+V LFP
Sbjct: 460 ALEVGLPPTGGLGIGIDRVIMLLTDSTSIRDVLLFP 495


>gi|127511746|ref|YP_001092943.1| lysyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166229827|sp|A3QB36|SYK_SHELP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|126637041|gb|ABO22684.1| lysyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 500

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 39/272 (14%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           FL I+D  G  Q  A  D     + K +++++     G ++           +TGQ+ LS
Sbjct: 76  FLVIQDVSGRIQAYAGKD-----VQKDLKAKYQGLDIGDIIG----------VTGQLHLS 120

Query: 98  AQKIEILSVAEELPLPVFGEREYPESI--------RFKYRFLDL-RRDTLHKNIVKRTRI 148
             K ++    EE  L     R  PE          R++ R++DL   +      + R+++
Sbjct: 121 G-KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRAAFIMRSKV 179

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
           + ++R  M+++ F+E  TP++  S P GA  R F+          Y L  AP+ Y + L+
Sbjct: 180 VTAIRNFMVSKEFMEVETPMM-HSIPGGASARPFITHHNALDIEMY-LRIAPELYLKRLV 237

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
             GF+R F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  + ++   
Sbjct: 238 VGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIAKDLLG 296

Query: 267 GNTV---------SNNFLRICYDDAIRRYGTD 289
              +            + R+   DAI++Y  D
Sbjct: 297 DTKLPYGEHTIDFGGPYERLSMLDAIKKYNPD 328



 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|315660315|ref|ZP_07913168.1| lysine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315494604|gb|EFU82946.1| lysine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 522

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 125/274 (45%), Gaps = 21/274 (7%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAK 63
           +S  +L   +  S V ++G +   R  G   F  I+D  G  Q+    D      F+I K
Sbjct: 74  YSKEELHGKEAESHVTIAGRLMTKRGKGKAGFAHIQDLSGQIQIYVRKDQVGEEQFDIWK 133

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
                 ++ IDG++   +         TG++ + A+   +LS A   LP    G ++  +
Sbjct: 134 IADLGDIVGIDGVMFKTN---------TGELTVKAKTFTLLSKALRPLPDKFHGLQDIEQ 184

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARD 179
             R++ R+LDL       +  + R++II  MR  +  + F+E  TP++    P G  AR 
Sbjct: 185 --RYRQRYLDLITNKESTQTFIHRSKIIQEMRNYLNNKGFLEVETPMM-HQIPGGAAARP 241

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+        + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++
Sbjct: 242 FVTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIEL 299

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
             ++ +  DI++  E+++R + +E      V  N
Sbjct: 300 YEAYADFHDIMDLTESLIRHIAQEVFGSAKVQYN 333



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 482 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 517


>gi|224000023|ref|XP_002289684.1| asparaginyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220974892|gb|EED93221.1| asparaginyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 487

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/314 (21%), Positives = 115/314 (36%), Gaps = 58/314 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + GWV  VR    + F+++ D   +  +       C      V  + +  ID L    
Sbjct: 25  VSVKGWVKTVRKQKTLAFVEVNDGSNMGGI------QCVVPFDGVDEDTLAAIDNLTTGC 78

Query: 81  SAET----INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           S       +N+      +ELSA  + ++        P+  +R   E +R     L  R +
Sbjct: 79  SVHATGLIVNSQGGKQSVELSASSLRVVGTCPGETFPLAKKRHSLEYLR-TIAHLRPRTN 137

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T+      R+ +  S+      E F    TP++TAS  EGA +    + +N     +LP+
Sbjct: 138 TIAAVARVRSTLAGSIHSFFQGEGFQYVQTPLITASDCEGAGEMFRVTTLNTDDVSSLPR 197

Query: 197 APQQYKQLL--------------------------MASGFDRYFQIAPCFRDEDPRSDRL 230
           A  +  + L                           A      +   P FR E+ ++ R 
Sbjct: 198 AKDEDGKELPGVDYTEDFFGKAAFLTVSGQLGGETYACALGDVYTFGPTFRAENSQTARH 257

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE---------------FSNG------NT 269
             EF+ ++ EM+F +    ++  E++L+ V  E               F  G        
Sbjct: 258 LAEFWMVEPEMAFADLTSAMDNAESMLKSVVGEVLEKCDEDLTFFANFFDKGLKNRLKKV 317

Query: 270 VSNNFLRICYDDAI 283
           V   F+R+ Y DAI
Sbjct: 318 VEKPFVRVAYRDAI 331


>gi|212532907|ref|XP_002146610.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Penicillium
           marneffei ATCC 18224]
 gi|210071974|gb|EEA26063.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Penicillium
           marneffei ATCC 18224]
          Length = 578

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 25/283 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VHR+R    +IF+ + D YG  Q +   D        ++  E  + I G +
Sbjct: 153 GTRVRVLGRVHRLRSQKDVIFITLTDGYGYLQCIMTGDMVKTYDMMTLTLETSIAIHGEM 212

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLR 134
            +   +    N      EL A    I+  A   +E           P+++ +  R L LR
Sbjct: 213 RAVPPKQHAPN----DRELHADFFTIIGKAAGDKEAITSRVAPDADPQTL-YDNRHLVLR 267

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +T    +  R   + + R    A   +E + P +  +  EG           + ++  L
Sbjct: 268 GETSSSVMKVRAATLKAFRKTFEASRMLEVTPPSMVQTQVEGGSTLFSFDYYGEPAY--L 325

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y +  +AS  D  F I P FR E   + R   E+  ++ E+ F+  DD+L  +E
Sbjct: 326 TQSSQLYLETCLASLGD-VFCICPSFRAEKSLTRRHLSEYTHIEAELDFITFDDLLEHLE 384

Query: 255 NVLRGVFEE-FSNGNTV-------------SNNFLRICYDDAI 283
            V+  V EE  ++  T              S  F R+ Y DAI
Sbjct: 385 EVISRVIEELLADEQTAKLIKELNPDFKVPSRPFRRMRYSDAI 427


>gi|254383488|ref|ZP_04998839.1| lysyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194342384|gb|EDX23350.1| lysyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 1100

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 116/271 (42%), Gaps = 28/271 (10%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTH+   L  +          G  V L+G V  VR  GG++F  +RD  G TQ++   D 
Sbjct: 637 RTHTVAQLKAAHPGHPPGARTGEEVTLAGRVMVVRDLGGVVFAVLRDWSGDTQLMLTRDE 696

Query: 57  ACFEIAKSVRSE-----WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
           A   +  S  S+      VL    +  SRS E    +++    +L+ + +         P
Sbjct: 697 AGVGVLDSFTSQVDFGDHVLARGEVGASRSGEL---SLVVRSWQLTGKCLR--------P 745

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT 170
           LP   +       R + R+LDL      +++V+ R+  + ++R  ++   ++E  TP+L 
Sbjct: 746 LPDKRKGLADPEARVRRRYLDLVASPEARDVVRARSAAVQALRQGLLDRGYLEVETPMLQ 805

Query: 171 A-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  AR F           Y L  AP+ Y + L   G ++ F++   FR+E      
Sbjct: 806 QIHGGANARPFRTHINAYDLDLY-LRIAPELYLKRLCVGGMEKVFEMGRTFRNEGVSYKH 864

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            P EF  L+   +F + D +L+    +++G 
Sbjct: 865 NP-EFTMLEAYQAFADYDVMLDLTRELIQGA 894



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 11/93 (11%)

Query: 479  AFQYDLVCNGFEIASGGIR-----NHMSEVMLQAFSNVGISKEVVE--NRFGGLYRAFQC 531
            A ++DLV  G E+ +              +  Q+    G   E +E  N F     A + 
Sbjct: 1008 AERWDLVAFGTELGTAYSELTDPVEQRRRLTAQSLLAAGGDPEAMELDNDF---LDALEY 1064

Query: 532  GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             MPP GG+  G+DR+VM L G   +RE   FP+
Sbjct: 1065 AMPPTGGLGIGVDRLVMFLTGL-TIRETLPFPL 1096


>gi|145219506|ref|YP_001130215.1| lysyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|145205670|gb|ABP36713.1| lysyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 502

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 131/304 (43%), Gaps = 39/304 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +  +R  G   F  I+D  G  QV    D    E+ ++  + + L   G +   
Sbjct: 58  VSVAGRIMAIRKMGKASFFHIQDAKGRIQVYLKKD----EVGETSYNTFKLLDIGDIAGV 113

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----------ESIRFKYR 129
              T      TG+I + A+   +LS +   P+PV  E+E               +R++ R
Sbjct: 114 KGYTFKTR--TGEISVHAEDFTLLSKSLR-PIPVAKEKEVEGEKVVFDAFSDRELRYRQR 170

Query: 130 FLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL  +  + +  +KR+ I++ MR    A+ ++E  TPIL        AR F       
Sbjct: 171 YVDLIVNPEVRETFIKRSAIVSHMRSFFTAKGWLEVETPILQPIYGGAAARPFTTHHNAL 230

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDMEMSFVEQ 246
               Y L  A + Y + L+  GF+  F+ A  FR+E    DR    EF Q+++ +++ + 
Sbjct: 231 DMELY-LRIANELYLKRLIVGGFEGVFEFAKDFRNEG--IDRFHNPEFTQVELYVAYKDY 287

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY------GTDKP 291
           + ++  +E +        +  +T S           F RI   D+I+ Y      G  + 
Sbjct: 288 NWMMELVEQLFHQTALAVNGSDTTSFLGNEISLKPPFRRITIADSIKEYTGADIEGKSEQ 347

Query: 292 DLRN 295
           +LRN
Sbjct: 348 ELRN 351



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VMLL G  ++R+V  FP
Sbjct: 461 RALEYGMPPTAGLGIGVDRLVMLLTGEDSIRDVIFFP 497


>gi|325201876|gb|ADY97330.1| lysyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325208371|gb|ADZ03823.1| lysyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 503

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    ++ N         F R+   +AI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  E   + F +    K+  ++    +   Y RA + G+PP 
Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|229112023|ref|ZP_04241566.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229152756|ref|ZP_04280939.1| Asparaginyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228630576|gb|EEK87222.1| Asparaginyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228671346|gb|EEL26647.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock1-15]
          Length = 463

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 128/327 (39%), Gaps = 61/327 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V   
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             ++ +  A+           E+ A+KI+I  +++    P+  +R   E +R       L
Sbjct: 77  GKVIATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T   +   R R I +       +   F+   TPI+T S  EGA +     RV     
Sbjct: 125 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 181

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             LP+                       Q      A  F   +   P FR E+  + R  
Sbjct: 182 NNLPKGEDGKVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270
            EF+ ++ E++F E  D++N  E++L+   +          EF N            N +
Sbjct: 242 AEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVI 301

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F RI Y +AI+       D + P+
Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328


>gi|29374909|ref|NP_814062.1| lysyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227520053|ref|ZP_03950102.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227555914|ref|ZP_03985961.1| lysyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229550491|ref|ZP_04439216.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255974768|ref|ZP_05425354.1| lysyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256762063|ref|ZP_05502643.1| lysyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256956804|ref|ZP_05560975.1| lysyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256960609|ref|ZP_05564780.1| lysyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256964191|ref|ZP_05568362.1| lysyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257078473|ref|ZP_05572834.1| lysyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257081555|ref|ZP_05575916.1| lysyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257084203|ref|ZP_05578564.1| lysyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257088030|ref|ZP_05582391.1| lysyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257417633|ref|ZP_05594627.1| lysyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257418642|ref|ZP_05595636.1| lysyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|293382696|ref|ZP_06628621.1| lysine--tRNA ligase [Enterococcus faecalis R712]
 gi|293388122|ref|ZP_06632649.1| lysine--tRNA ligase [Enterococcus faecalis S613]
 gi|294779306|ref|ZP_06744709.1| lysine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307268521|ref|ZP_07549896.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307274232|ref|ZP_07555440.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307278667|ref|ZP_07559737.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|312908592|ref|ZP_07767534.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312909260|ref|ZP_07768117.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|39932158|sp|Q839A8|SYK_ENTFA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|29342367|gb|AAO80133.1| lysyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227072601|gb|EEI10564.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227174971|gb|EEI55943.1| lysyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229304348|gb|EEN70344.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255967640|gb|EET98262.1| lysyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256683314|gb|EEU23009.1| lysyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256947300|gb|EEU63932.1| lysyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256951105|gb|EEU67737.1| lysyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256954687|gb|EEU71319.1| lysyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256986503|gb|EEU73805.1| lysyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256989585|gb|EEU76887.1| lysyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256992233|gb|EEU79535.1| lysyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256996060|gb|EEU83362.1| lysyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257159461|gb|EEU89421.1| lysyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|257160470|gb|EEU90430.1| lysyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|291079856|gb|EFE17220.1| lysine--tRNA ligase [Enterococcus faecalis R712]
 gi|291082498|gb|EFE19461.1| lysine--tRNA ligase [Enterococcus faecalis S613]
 gi|294453592|gb|EFG21991.1| lysine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|306504727|gb|EFM73927.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306509194|gb|EFM78256.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306515182|gb|EFM83722.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310625379|gb|EFQ08662.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311290502|gb|EFQ69058.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|315026774|gb|EFT38706.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315032988|gb|EFT44920.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315036599|gb|EFT48531.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315147110|gb|EFT91126.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315151137|gb|EFT95153.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315168161|gb|EFU12178.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315171399|gb|EFU15416.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315172632|gb|EFU16649.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315573576|gb|EFU85767.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315582076|gb|EFU94267.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0309A]
 gi|329577256|gb|EGG58720.1| lysine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 498

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 121/267 (45%), Gaps = 21/267 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59
           +Y  H+  +L  S++ + V ++G +   R  G   F  ++D  G  Q+    D      +
Sbjct: 50  QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+ K         + G VM  +         TG++ + AQ I +L+ A   PLP      
Sbjct: 108 ELFKHADLGDFFGVTGQVMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157

Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                R++ R+LDL   +++  +  +KR++II+ +R  +    ++E  TP+L   +    
Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P EF  
Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263
           L+   ++ +  D+++  E ++R   E+
Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNAAEK 301



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL  A+++R+V LFP
Sbjct: 460 ALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495


>gi|121635115|ref|YP_975360.1| lysyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|166229812|sp|A1KUN1|SYK_NEIMF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|120866821|emb|CAM10579.1| lysyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|325132393|gb|EGC55086.1| lysyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325138382|gb|EGC60950.1| lysyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 503

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    ++ N         F R+   +AI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|109122288|ref|XP_001085923.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic [Macaca
           mulatta]
          Length = 559

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 26/255 (10%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V             +  E   C +G+
Sbjct: 135 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 181

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           ++S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 182 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 241

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ I    R       + E + P L  +  EG       +   
Sbjct: 242 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYHEITPPSLVQTQVEGGATLFKLNYFG 301

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  D
Sbjct: 302 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFD 358

Query: 248 DILNTMENVLRGVFE 262
           D+LN +E+++  V +
Sbjct: 359 DLLNRLEDLVCDVVD 373


>gi|255513954|gb|EET90219.1| lysyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 485

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 19/249 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCID 74
           G  V  +G +  +R  G + F+D+ D  G  QV+A+    D    +I   + +  ++ + 
Sbjct: 43  GKAVSAAGRIVGMRHMGKLYFMDLLDQTGKIQVLASASDLDEMSLKIVDLLDTGDIIGVH 102

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
           G V              G+I + A ++ +LS + + +P    G  +    IR++ R+LDL
Sbjct: 103 GTVTKTK---------RGEISIGASEVVMLSKSLKSMPEKFHGLNDV--EIRYRKRYLDL 151

Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF 191
             +   +N  + R +I+  MR  + +  + E  TP+L  A     A  F+          
Sbjct: 152 IANPEVRNFFITRAKILKYMRDFLDSRGYTEFETPVLQPAYGGANATPFVTHYNAIDSDV 211

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  + + Y + L+  GF++ ++++  FR+ED  S   P EF Q++   ++ + +D + 
Sbjct: 212 Y-LRISDELYLKRLIIGGFEKVYEVSKDFRNEDMDSTHNP-EFTQIEAYEAYKDYNDYME 269

Query: 252 TMENVLRGV 260
             E +L G+
Sbjct: 270 MTEELLGGM 278


>gi|254167277|ref|ZP_04874129.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197623540|gb|EDY36103.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 480

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 124/252 (49%), Gaps = 22/252 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLC 72
           +G  V ++G ++ +R HG + F D+RD+    Q     D    E    + K V     L 
Sbjct: 45  MGKKVAVAGRLYALRFHGKVAFGDLRDNGSKIQGFFRMDVLGEEQYKFLKKYVDRGDFLW 104

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFL 131
           I G V +R+ +        G++ + A++I++ S A  +LP   FG  +  +  R++ R+L
Sbjct: 105 IKGEV-TRTKK--------GELSVLAEEIKLASKALYDLPHEWFGIEDTEK--RYRQRYL 153

Query: 132 DL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ- 188
           DL   +D      +KR+ I   +R  +    F+E  TP+L      GA      + VN  
Sbjct: 154 DLMFNKDAFD-TFIKRSIIEKEIRMFLWNRGFLEMETPVLQPVYG-GANAKPFKTHVNAI 211

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  + + Y + L+  G+++ F+IA  FR+ED  +   P EF  +++  S+V+ +D
Sbjct: 212 DRDYYLRISDELYLKRLIVGGYNKVFEIAKDFRNEDIDTTHNP-EFTMIEIYQSYVDYND 270

Query: 249 ILNTMENVLRGV 260
           +++  E +++ V
Sbjct: 271 MMDLTEEMIKHV 282



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 16/94 (17%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----------LYRAFQ 530
           +++L   G E+A+G     +++ +LQ        +E VE R  G             A +
Sbjct: 388 RFELYVGGVELANG--YTELNDPLLQE----KFFREEVERRTLGDEEAHQYDEDFIEALR 441

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GMPP GG+  GIDR+ MLL G  +++EV LFP+
Sbjct: 442 WGMPPMGGVGIGIDRLTMLLTGNTSIKEVILFPI 475


>gi|21674209|ref|NP_662274.1| lysyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|39932217|sp|Q8KCM7|SYK_CHLTE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|21647373|gb|AAM72616.1| lysyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 511

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 33/289 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +  +R  G   FL I+D  G  Q+    D    ++ ++  + + L   G ++  
Sbjct: 67  VSVAGRIMAIRRMGKASFLHIQDSEGRIQIYLKKD----DVGEASYNTFKLLDIGDIVGV 122

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----------ESIRFKYR 129
           S  T      TG+I + A++ E+L+ +   P+P+  E+E               +R++ R
Sbjct: 123 SGFTFKTK--TGEISVHARQFELLAKSLR-PIPIAKEKEVDGQKVIYDAFSDRELRYRQR 179

Query: 130 FLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL  +  +    +KRT+I+  MR    +  ++E  TPIL        AR F       
Sbjct: 180 YVDLIVNPEVRGTFIKRTKIVALMRNYFASNGWLEVETPILQPIYGGAAARPFTTHHNAL 239

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDMEMSFVEQ 246
               Y L  A + Y + L+  GFD  F+ A  FR+E    DR    EF Q+++ +++ + 
Sbjct: 240 DMQLY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEG--IDRFHNPEFTQVELYVAYKDY 296

Query: 247 DDILNTMENVLRGVFEEFSN-------GNTVSNN--FLRICYDDAIRRY 286
             ++  +E++L     E +        GN ++    F R+   D+IR Y
Sbjct: 297 IWMMELVEDLLHKACVEVNGKDSTMFLGNEINLKPPFRRLTIADSIREY 345



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  GIDR+VMLL G  ++R+V  FP
Sbjct: 470 RALEYGMPPCAGLGIGIDRMVMLLTGQDSIRDVIFFP 506


>gi|222055188|ref|YP_002537550.1| lysyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221564477|gb|ACM20449.1| lysyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 494

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 112/238 (47%), Gaps = 13/238 (5%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G   F+ ++D  G  Q+    D+   E+ +   S  +  I G      A
Sbjct: 60  VAGRIIARRSFGKAAFVQLQDRKGRFQLYVKKDAVGEEVFEQFESFDIGDIVG------A 113

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKN 141
                   TG++ L  ++I +L+ +  LPLP           R++ R++DL  +  + + 
Sbjct: 114 TGYPFRTKTGELSLHVEQIRLLTKSL-LPLPEKFHGLTDVETRYRQRYVDLIVNPEVREL 172

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQAPQ 199
            VKR+R+IN +R  M+  +F+E  TP++    P G  AR F+          + L  AP+
Sbjct: 173 FVKRSRVINLIREFMVKNDFLEVETPMMQ-QIPGGATARPFVTHHNALDMELF-LRIAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Y + L+  G DR F+I   FR+E   S R   EF  ++   ++   +D++N  E +L
Sbjct: 231 LYLKRLVVGGLDRVFEINRNFRNEGI-SVRHNPEFTMMEFYQAYATFEDLMNYTEELL 287



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VMLL  A ++R+V LFP
Sbjct: 451 RALEYGMPPTAGEGIGIDRLVMLLCDAPSIRDVILFP 487


>gi|152969073|ref|YP_001334182.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238893514|ref|YP_002918248.1| lysyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|150953922|gb|ABR75952.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|218117880|dbj|BAH03311.1| lysyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238545830|dbj|BAH62181.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 505

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 135/289 (46%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G +++ 
Sbjct: 68  VAVAGRMMTRRVMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDIIAA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        + +R++ R+LDL  +   +
Sbjct: 125 RGKLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANEESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  + R++I+ +MR  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 HTFRIRSQILATMRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298

Query: 258 RGVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +      E   G+ V      F ++   +AI+++   T+  DL N
Sbjct: 299 RTLAQTVLGKTEVPYGDQVFDFGKPFEKLTMREAIKKHRPETNMADLDN 347



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|291460290|ref|ZP_06599680.1| lysine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291417045|gb|EFE90764.1| lysine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 656

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 21/261 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   FL ++D  G  QV    DS   +  +  +    L I  L+
Sbjct: 63  GKTVSVAGRILSKRVMGKASFLHLQDREGKIQVYVTRDSLGEDRYRGFKK---LDIGDLI 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                E        G+I + A+K+ +LS +   PLP          +R++ R++DL  + 
Sbjct: 120 ---GVEGFAFTTKMGEISIHAEKLTLLSKSL-YPLPEKFHGLQDTDVRYRQRYVDLIMNE 175

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
             + + VKR+RII+ +R  +   +FIE  TP+L  ++   A      +R  +  + AL +
Sbjct: 176 DSRAVFVKRSRIIHEIRSFLADRDFIEVETPMLVDNAGGAA------ARPFETHYNALDE 229

Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                 + + Y + L+  G +R F+I   FR+E   +   P EF  +++  ++ + + ++
Sbjct: 230 DVKLRISLELYLKRLIIGGLERVFEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMM 288

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E++ R + E+    + +S
Sbjct: 289 ELTESLFRHIAEKVCGTSLIS 309



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 26/42 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           A + GMPP GGI  GIDR+VML      +R+V LFP  ++  
Sbjct: 460 AMEIGMPPTGGIGYGIDRLVMLFTDTPAIRDVLLFPTLKSLS 501


>gi|269103438|ref|ZP_06156135.1| lysyl-tRNA synthetase (class II) [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163336|gb|EEZ41832.1| lysyl-tRNA synthetase (class II) [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 500

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 23/269 (8%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           FL I+D  G  Q  A+ D     + K ++ ++     G ++    E   +    G + ++
Sbjct: 76  FLAIQDVTGRIQAYASKD-----VQKELKDKYSGLDIGDIIGIKGELHKSG--KGDLYVN 128

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
             + E+L+ A   PLP        + +R++ R++DL   D   K    R+++++++R  M
Sbjct: 129 MDQYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNDDSRKAFKIRSQVVSAIRSFM 187

Query: 157 IAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           + + F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  GF+R F
Sbjct: 188 VTKGFMEVETPMMHVI-PGGATARPFITHHNALDIDMY-LRVAPELYLKRLVVGGFERVF 245

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---- 270
           +I   FR+E   S R   EF  ++  M++ +  D+++  E +L  +  E    + +    
Sbjct: 246 EINRNFRNEG-LSPRHNPEFTMMEFYMAYADYRDLMDLTEEMLSSIAIEVLGSSKMPYGD 304

Query: 271 -----SNNFLRICYDDAIRRYGTDKPDLR 294
                +  + R+   DAI+ Y  D  +++
Sbjct: 305 FEVEFAGPYTRMSMLDAIKHYNPDHAEIQ 333



 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|225375162|ref|ZP_03752383.1| hypothetical protein ROSEINA2194_00786 [Roseburia inulinivorans DSM
           16841]
 gi|225213036|gb|EEG95390.1| hypothetical protein ROSEINA2194_00786 [Roseburia inulinivorans DSM
           16841]
          Length = 664

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 133/287 (46%), Gaps = 32/287 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F +++D  G  Q     D    EI +   +++     G +
Sbjct: 73  GQEVTVAGRMMFKRVMGKASFCNVQDLKGRIQAYVARD----EIGEESYADFKKYDVGDI 128

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL-RR 135
           +    +       TG+I + AQ++ +LS + + LP    G  +     R++ R++DL   
Sbjct: 129 LGIKGKVFKTQ--TGEISIHAQEVTLLSKSLQILPEKYHGLTD--TDARYRQRYVDLIMN 184

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +    VKR+++I+S+R  +  + F+E  TP+L  S+  GA      +R  +  F AL 
Sbjct: 185 EDVKDTFVKRSKVISSIRRYLDGQGFMEVETPML-VSNAGGA-----SARPFETHFNALN 238

Query: 196 Q------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   +
Sbjct: 239 EDLKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYHGM 297

Query: 250 LNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRYG 287
           ++  EN+ R + +E +             +S  F RI   DA+++Y 
Sbjct: 298 MDLTENLYRYIAKEVTGSEILTYGEHTMDLSKPFERITMVDAVKKYA 344



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 27/41 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A   GMPP GGI  GIDR+VM++  +  +R+V LFP  ++ 
Sbjct: 470 ALAIGMPPTGGIGFGIDRMVMMMTNSPAIRDVLLFPTMKSL 510


>gi|332994016|gb|AEF04071.1| lysyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 518

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 121/246 (49%), Gaps = 28/246 (11%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEW-------VLCIDGLVMSRSAETINANII 90
           F+ ++D  G  Q  A+ D+      K++++++       ++ + G V+ +S +       
Sbjct: 76  FMLLQDMTGRIQAYADKDTQ-----KALKAQYGALDIGDIIGVAG-VLHKSGK------- 122

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
            G + ++ +K  +L+ A   PLP        +  +++ R++DL   +   K  + R++I+
Sbjct: 123 -GDLYVNTEKYALLTKALR-PLPEKFHGLSDQETKYRQRYVDLITSEQTRKTFMIRSKIV 180

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           N +R  +   +F+E  TP+L    P GA  + F+          Y L  AP+ Y + L+ 
Sbjct: 181 NGIRNYLTQRDFLEVETPMLQVI-PGGATAKPFVTHHNALDIDMY-LRIAPELYLKRLVV 238

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            GF+R F+I   FR+E   +   P EF  L+   ++ + +D++N  E++LR + E+    
Sbjct: 239 GGFERVFEINRNFRNEGLSTRHNP-EFTMLEFYQAYADFNDLMNLTEDMLRTLAEDILGS 297

Query: 268 NTVSNN 273
           + ++N 
Sbjct: 298 SIITNT 303



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G E+A+G    + SE   + FS     K+  ++    +   Y RA + G+PP 
Sbjct: 419 RFEFFVGGRELANGFSELNDSEDQAKRFSKQVEEKDAGDDEAMHYDEDYIRALEYGLPPT 478

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+ ML   +  +++V LFP
Sbjct: 479 AGEGIGIDRLAMLFTDSPTIKDVILFP 505


>gi|331086545|ref|ZP_08335623.1| hypothetical protein HMPREF0987_01926 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330410378|gb|EGG89810.1| hypothetical protein HMPREF0987_01926 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 649

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 133/285 (46%), Gaps = 30/285 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F +++D  G  Q     D+   E  K+ +   +  I G+ 
Sbjct: 57  GKDVAIAGRIMSKRVMGKASFCNVQDLQGNIQSYVARDNIGEEAYKAFKKMDIGDIVGI- 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
                +     +  G+I + AQ++ +LS + ++ LP          +R++ R++DL  + 
Sbjct: 116 ---KGDVFRTKM--GEISIHAQEVTLLSKSLQI-LPEKFHGLTNTDLRYRQRYVDLIMNP 169

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +    +KR++I++++R  +  + F+E  TPIL +++   A      +R  +  F AL +
Sbjct: 170 DVKDTFIKRSKILSAIRKYLDGQGFMEVETPILVSNAGGAA------ARPFETHFNALNE 223

Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                 + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++
Sbjct: 224 DFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMM 282

Query: 251 NTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286
           +  EN+ R V +E      ++           F RI   DA+++Y
Sbjct: 283 DLTENLYRFVAQEVLGTTKITYGGVEMDLGKPFERITMVDAVKKY 327



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+ MLL  +  +R+V LFP
Sbjct: 454 ALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFP 489


>gi|306824865|ref|ZP_07458209.1| asparagine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304433076|gb|EFM36048.1| asparagine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 447

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             FE  K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFETIKHL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD+AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDEAI 294



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|255950584|ref|XP_002566059.1| Pc22g21630 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211593076|emb|CAP99451.1| Pc22g21630 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 967

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 114/279 (40%), Gaps = 34/279 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           D+ ++  G  V  S  +H +R     ++FL  R      Q V +       IA     +W
Sbjct: 152 DITLAMEGQEVFFSARLHVIRRLSAKLVFLVFRQQLATFQGVLHEREGISSIAMI---QW 208

Query: 70  V--LCIDGLVMSRSAETINANIITG----QIELSAQKIEILSVAEELPLP---------- 113
           V  L +   VM R         + G     +EL    +  L V  E P+P          
Sbjct: 209 VEHLRVGSFVMVRGTIQKPEVPVLGCSIHDVELVIDSVH-LQVRREEPVPFSVYEAEIRT 267

Query: 114 -----VFGEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
                  G R + P+  R   R LDLR  T       +    N  R  +    F+E  TP
Sbjct: 268 NEEERAEGRRNHIPDRTRLANRILDLRTSTSQSIFRIQAATCNLFRAALDDREFVEIHTP 327

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            L  ++ E        +   + +F A  Q+PQ  KQ+ +A+ F R ++I   FR E+  +
Sbjct: 328 KLQGAATESGASVFQVNYFGRPAFLA--QSPQLAKQMAIAADFGRVYEIGAVFRAENSNT 385

Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTME----NVLRGVF 261
            R   E+  LD+EM+  E   ++L T++    N+L+G++
Sbjct: 386 HRHLTEYTGLDLEMAIEEHYHEMLETLDAVIKNILKGLY 424



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 10/114 (8%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H   ++ +    VGI+ + +E    G    F+ G PPH G   
Sbjct: 528 FDMFIRGQEIVSGGQRIHDVHMLEENMRRVGINPDDMEEYLEG----FRWGAPPHAGAGV 583

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G++RIVML+L   N+R  S+FP            P+    EQLR      +E P
Sbjct: 584 GLERIVMLILKLGNIRLTSMFPRDPKSL------PAKPVSEQLRHPESSTIEPP 631


>gi|325144654|gb|EGC66952.1| lysyl-tRNA synthetase [Neisseria meningitidis M01-240013]
 gi|325204413|gb|ADY99866.1| lysyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 503

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 132/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      EI     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEILDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E ++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNERYLEVETPMMHP-IPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    +S N         F R+   +AI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTAKISYNGKEVDLESPFERLTILEAIKKY 335



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|261401860|ref|ZP_05987985.1| lysine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269207986|gb|EEZ74441.1| lysine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 503

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           GD+G  ++      V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GDIGKEELDPQAVPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    ++ N         F R+   +AI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|116495963|ref|YP_807697.1| lysyl-tRNA synthetase (class II) [Lactobacillus casei ATCC 334]
 gi|116106113|gb|ABJ71255.1| Lysyl-tRNA synthetase (class II) [Lactobacillus casei ATCC 334]
          Length = 498

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 141/338 (41%), Gaps = 43/338 (12%)

Query: 2   HRY-RTHSCG----DLGVSDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH+      + G  D  +       V ++G +   R  G + F DIRD  G  Q+
Sbjct: 35  HRFDRTHTAAKVREEFGEDDKETLLDEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 94

Query: 51  VANPD---SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
               D      + I K      +L I G VM            T   EL+ +   +  +A
Sbjct: 95  YVRKDVVGDDNYMIFKKADLGDILGISGEVMK-----------TDSGELTVKANHVTHLA 143

Query: 108 EEL-PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           + L PLP           +++ R+LDL    D+  +  VKRT+I++++R  +    F+E 
Sbjct: 144 KALRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDR-FVKRTKIVSAVREYLDNNGFLEV 202

Query: 165 STPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP+L   +    AR F+          Y L  A + + + L+  G +R ++I   FR+E
Sbjct: 203 ETPVLHNQAGGANARPFVTHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNE 261

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------F 274
              +   P EF +L+   ++ +  D++   E + R    +  +   ++           F
Sbjct: 262 GIDTKHNP-EFTELETYAAYRDLTDVMTETEGIFRFAAHKVLDTGKLTYQGMAIDLDAPF 320

Query: 275 LRICYDDAIR-RYGTD-KPDLRNPIIMHNVTEHFVHSE 310
            RI   DAI+ + G D  P++          EH VH E
Sbjct: 321 ARINMLDAIKDKTGVDFWPEMSVDDARKLADEHDVHYE 358



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 8/52 (15%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GI  + VE        A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 451 GIDDDYVE--------ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 494


>gi|325267116|ref|ZP_08133785.1| lysine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324981469|gb|EGC17112.1| lysine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 504

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 24/279 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  I+D  G  Q+  N      E+     + W L   G ++  
Sbjct: 69  VKIAGRIMLKREMGKASFATIQDVTGQIQLYLNNKGVSQEVLDDF-NHWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                     TG+ EL+ +  +I  +++ L PLP   +    +  +++ R++DL  +   
Sbjct: 125 EGTLFK----TGKGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEES 180

Query: 140 KNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQ 196
           +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+          Y L  
Sbjct: 181 RNTFIKRSQIIQSVRNFMVNEHYLEVETPMM-HPIPGGATAKPFVTHHNALDIPLY-LRI 238

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F + + ++   E++
Sbjct: 239 APELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAFSDYERMMQMAEDI 297

Query: 257 LRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           +R      +    +S N         F R+   +AI++Y
Sbjct: 298 IRNASRTVNGTAKISYNGKEVDLESPFERLTILEAIKKY 336



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 463 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 499


>gi|227496387|ref|ZP_03926675.1| possible lysyl-tRNA synthetase [Actinomyces urogenitalis DSM 15434]
 gi|226834072|gb|EEH66455.1| possible lysyl-tRNA synthetase [Actinomyces urogenitalis DSM 15434]
          Length = 457

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 14/231 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           S V ++G V  +R HGG+IF  +RD  G  QV+ +   A  E   S R   ++ I   V 
Sbjct: 16  SPVTVAGRVMSLRDHGGVIFASLRDWSGDLQVLLDAGGAGQECLASFRR--LVRIGDQVA 73

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---RR 135
              A   + N   G   L A    + S A   PLP          +R + R L L    R
Sbjct: 74  VTGAPGASRN---GTPSLVASSWTMTSKALR-PLPNKHRGLQDPEMRVRQRHLALIISSR 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
           D   + +V R+  I ++R  ++   ++E  TP+L        AR F           Y L
Sbjct: 130 D--RRMLVARSHAIQAVRSTLLQRGYLEVETPMLHPVHGGANARPFRTHINAYDLDLY-L 186

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             AP+ Y + LM +G DR F+I   FR+E   +   P EF  L+   S+ +
Sbjct: 187 RIAPELYLKRLMVAGADRVFEIGRSFRNEGADATHNP-EFTMLEAYQSYAD 236



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 11/97 (11%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ-------AFSNVGISKEVVENRFGGLYR 527
           L + A ++DL+  G E+  G   + + + +LQ       + +  G   E +E     L +
Sbjct: 360 LPLLAERWDLIIFGSEV--GTAYSELVDPVLQRERLTAQSLAAAGGDPEAMELDEAFL-Q 416

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  G+DR+VM+L GA ++RE   FP+
Sbjct: 417 ALEQGMPPTGGLGVGLDRLVMMLTGA-SIRETITFPL 452


>gi|218768429|ref|YP_002342941.1| lysyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|32130176|sp|Q9JTT7|SYK_NEIMA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|121052437|emb|CAM08773.1| lysyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|319410675|emb|CBY91052.1| lysyl-tRNA synthetase (lysine-tRNA ligase; LysRS) [Neisseria
           meningitidis WUE 2594]
          Length = 503

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    ++ N         F R+   +AI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASHTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|322381159|ref|ZP_08055162.1| lysyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154735|gb|EFX47006.1| lysyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 524

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 124/283 (43%), Gaps = 17/283 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
             G   +++ G  V ++G + + R  G   F  ++D  G  Q+    D+   +  K+   
Sbjct: 74  ETGKEELNEQGIQVSVAGRIMQKRGMGKASFAHVQDISGKIQIYVRLDAVGEDKYKAFEM 133

Query: 68  ---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
                ++ + G V             TG+  +  + +E+L+ +  +PLP          +
Sbjct: 134 LDLGDIIGVKGTVFKTK---------TGETSIKVKDLEVLTKSL-IPLPDKFHGLQDVEL 183

Query: 125 RFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182
           R++ R++DL     + K  + R++II SMRC + +  F+E  TP L A +    AR F+ 
Sbjct: 184 RYRQRYVDLIMNQDVQKTFILRSKIIQSMRCYLDSLGFLEVETPTLHAIAGGASARPFIT 243

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y +  A + + + L+  G ++ ++I   +R+E   +   P EF  +++  +
Sbjct: 244 HHNALDMQLY-MRIAIELHLKRLIVGGLEKVYEIGRVYRNEGVSTRHNP-EFTMIELYEA 301

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           + +  DI+   E+++  + +E     T+      +    A RR
Sbjct: 302 YADYKDIMQLTEDLISHIAKEVLGSTTIEYQGKEVNLAGAWRR 344



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG+  G+DR++MLL  A ++R+V LFP
Sbjct: 480 RALEYGLPPTGGLGIGVDRLIMLLTNAPSIRDVLLFP 516


>gi|254805207|ref|YP_003083428.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254668749|emb|CBA06609.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 503

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    ++ N         F R+   +AI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  E   + F +    K+  ++    +   Y RA + G+PP 
Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|325662822|ref|ZP_08151391.1| hypothetical protein HMPREF0490_02131 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325470874|gb|EGC74103.1| hypothetical protein HMPREF0490_02131 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 649

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 133/285 (46%), Gaps = 30/285 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F +++D  G  Q     D+   E  K+ +   +  I G+ 
Sbjct: 57  GKDVAIAGRIMSKRVMGKASFCNVQDLQGNIQSYVARDNIGEEAYKAFKKMDIGDIVGI- 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
                +     +  G+I + AQ++ +LS + ++ LP          +R++ R++DL  + 
Sbjct: 116 ---KGDVFRTKM--GEISIHAQEVTLLSKSLQI-LPEKFHGLTNTDLRYRQRYVDLIMNP 169

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +    +KR++I++++R  +  + F+E  TPIL +++   A      +R  +  F AL +
Sbjct: 170 DVKDTFIKRSKILSAIRKYLDGQGFMEVETPILVSNAGGAA------ARPFETHFNALNE 223

Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                 + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++
Sbjct: 224 DFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMM 282

Query: 251 NTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286
           +  EN+ R V +E      ++           F RI   DA+++Y
Sbjct: 283 DLTENLYRFVAQEVLGTTKITYGGVEMDLGKPFERITMVDAVKKY 327



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+ MLL  +  +R+V LFP
Sbjct: 454 ALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFP 489


>gi|254360791|ref|ZP_04976939.1| lysine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153091361|gb|EDN73335.1| lysine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 500

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 123/282 (43%), Gaps = 27/282 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V+++G +   R  G   F  I+D  G  Q+    D+    + +   S W    ++ ++G 
Sbjct: 64  VKVAGRIMLKRVMGKASFFTIQDVSGAIQLYVARDNLSDSVYEEKVSLWDLGDIVGVEGA 123

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           +             TG++ +   ++++L+ +   PLP           R++ R+LDL   
Sbjct: 124 LFKTK---------TGELTVRCSEVQLLTKSLR-PLPDKHHGLTDLETRYRQRYLDLISN 173

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
           +   +  + R+++++ +R   +  +FIE  TP+L        A+ F+          Y L
Sbjct: 174 EESRRTFMIRSQVVSGIRKFFLERDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMY-L 232

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +  D+++  E
Sbjct: 233 RIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMIEYYQAYADYHDLMDNTE 291

Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
            +LR +  +      V            F RI   DAI +YG
Sbjct: 292 ELLRQLALDILGTTDVPYGDYVFDFGKPFERITMHDAIVKYG 333



 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VM+   A ++R+V LFP
Sbjct: 460 ALEHGLPPTAGEGLGIDRLVMIFANAPSIRDVILFP 495


>gi|148679579|gb|EDL11526.1| mCG141545, isoform CRA_c [Mus musculus]
          Length = 632

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ ++
Sbjct: 161 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 220

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +  Q+I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 221 G---------NPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 269

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 270 ILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 328

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 329 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 386

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E +L G+ +  +    ++
Sbjct: 387 EITEKMLSGMVKSITGSYKIT 407



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 571 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 606


>gi|256618322|ref|ZP_05475168.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256597849|gb|EEU17025.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
          Length = 484

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 21/267 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59
           +Y  H+  +L  S++ + V ++G +   R  G   F  ++D  G  Q+    D      +
Sbjct: 50  QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+ K         + G +M  +         TG++ + AQ I +L+ A   PLP      
Sbjct: 108 ELFKHADLGDFFGVTGQIMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157

Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                R++ R+LDL   +++  +  +KR++II+ +R  +    ++E  TP+L   +    
Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P EF  
Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263
           L+   ++ +  D+++  E ++R   E+
Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNAAEK 301


>gi|255657502|ref|ZP_05402911.1| lysyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296452826|ref|ZP_06894513.1| lysine--tRNA ligase [Clostridium difficile NAP08]
 gi|296879922|ref|ZP_06903894.1| lysine--tRNA ligase [Clostridium difficile NAP07]
 gi|296258374|gb|EFH05282.1| lysine--tRNA ligase [Clostridium difficile NAP08]
 gi|296429036|gb|EFH14911.1| lysine--tRNA ligase [Clostridium difficile NAP07]
          Length = 509

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 130/286 (45%), Gaps = 32/286 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCI 73
           G   +++G +   R  G   F+DI+D  G  Q     D A  E   SV S +    ++ I
Sbjct: 62  GKTTKIAGRIMSKRIQGKAGFIDIQDQEGRIQSYVRLD-AIGEEEYSVFSTYDIGDIVGI 120

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLD 132
           +G +              G+I + A+ + +L  + + LP    G ++  + +R++ R++D
Sbjct: 121 EGEIFKTKK---------GEISVKAKSVVLLCKSLQVLPEKYHGLKD--QELRYRQRYVD 169

Query: 133 LRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGS 190
           L  +   KN  + RT+ + ++R  +    F+E  TPIL T +    AR F+         
Sbjct: 170 LIVNPEVKNAFLIRTKALKALRAYLDDRGFLEVETPILNTIAGGANARPFITNHNTLHIP 229

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  GFD+ +++   FR+E       P E+  +++  ++ +  D++
Sbjct: 230 MY-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDLKHNP-EYTAIELYQAYADYTDMM 287

Query: 251 NTMENVLRGVFEEFSNGNTVSN------NFL----RICYDDAIRRY 286
              ENV+     E + G+ + N      NF     R+  +D ++ Y
Sbjct: 288 EITENVI-AHMAEVATGSMIVNYQGTEINFTPPWKRMSMEDCVKEY 332



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + G+PP GG+  GIDR++MLL  + ++R+V LFP
Sbjct: 458 KALEVGLPPTGGLGIGIDRVIMLLTNSPSIRDVLLFP 494


>gi|315165840|gb|EFU09857.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1302]
          Length = 498

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 121/267 (45%), Gaps = 21/267 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59
           +Y  H+  +L  S++ + V ++G +   R  G   F  ++D  G  Q+    D      +
Sbjct: 50  QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+ K         + G VM  +         TG++ + AQ I +L+ A   PLP      
Sbjct: 108 ELFKHADLGDFFGVTGQVMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157

Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                R++ R+LDL   +++  +  +KR++II+ +R  +    ++E  TP+L   +    
Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P EF  
Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263
           L+   ++ +  D+++  E ++R   E+
Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNAAEK 301



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL  A+++R+V LFP
Sbjct: 460 ALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495


>gi|311745878|ref|ZP_07719663.1| asparagine--tRNA ligase [Algoriphagus sp. PR1]
 gi|311302438|gb|EAZ80360.2| asparagine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 483

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 111/271 (40%), Gaps = 29/271 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69
           L  S VG  V L GWV   R +  + F+ + D   IT  Q+VA+P     +I K   +  
Sbjct: 13  LDESPVGKEVTLMGWVRTKRSNKNVSFIALNDGSTITNYQIVADPTIISEDILKKCATGA 72

Query: 70  VLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            L + G V+             GQ  EL+A  I++L  A+    P+  +R   E +R + 
Sbjct: 73  CLKVTGTVVESQG--------AGQASELNAISIQVLGEADPEKYPLQPKRHSLEFLR-EI 123

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDF 180
             L +R +T       R  +  ++      + F    TPI+TAS  EGA         D 
Sbjct: 124 AHLRMRTNTFSAVFRVRHALAFAVNKYFNDKGFFYIHTPIITASDAEGAGETFKVTTLDL 183

Query: 181 LVPSRVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             P     G       F+   A      Q +  L A      +   P FR E+  + R  
Sbjct: 184 KNPPLTKDGDIDYREDFFEREANLTVSGQLEGELAAMALSEIYTFGPTFRAENSNTARHL 243

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            EF+ ++ EM+F + +D  +  E+ L+ + +
Sbjct: 244 AEFWMIEPEMAFYDAEDNQDLAEDFLKYIIQ 274



 Score = 37.4 bits (85), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 14/81 (17%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVV-----ENRFGGLYRAFQCGMPPHGGIAAGID 544
           EI  G  R    +V+ Q    + I ++ +       RFG           PH G   G +
Sbjct: 406 EIVGGSQREERLDVLTQRMEEMNIPQDEMWWYLDTRRFGAT---------PHAGFGLGFE 456

Query: 545 RIVMLLLGAKNVREVSLFPMS 565
           R+V+ + G  N+R+V  FP +
Sbjct: 457 RMVLFVTGMSNIRDVIAFPRT 477


>gi|164656537|ref|XP_001729396.1| hypothetical protein MGL_3431 [Malassezia globosa CBS 7966]
 gi|159103287|gb|EDP42182.1| hypothetical protein MGL_3431 [Malassezia globosa CBS 7966]
          Length = 575

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 124/301 (41%), Gaps = 40/301 (13%)

Query: 32  PHGGIIFLDIRDHYGITQ--VVANPDSACFEIAK---SVRSEWVLCIDGLVMSRSAETIN 86
           P   ++FL  R      Q  +   P+    ++ K   S+  E ++ ++G +        +
Sbjct: 135 PSAKLVFLTFRQTMHCVQATLAVTPEKVSRQMTKWAASITPESIVRVEGTITKVPKPVES 194

Query: 87  ANIITGQIELSAQKIEI-LSVAEELPLPVF------------GEREYPESI-------RF 126
            ++   + E+   +I + + V  E  +P +              ++ P  +       R 
Sbjct: 195 PSVTVKEAEIKISRIFVAVPVTWEGQIPFYVDDATRSDAEIEASQDTPRPLPPIALDTRL 254

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-----NFIECSTPILTASSPEGARDFL 181
             R LDLR  T ++ I +    +N   CR+  E      FIE  TP L  ++ E      
Sbjct: 255 DNRVLDLR-TTTNQAIFR----LNHGICRLFREFLENNGFIEIHTPKLQGAATESGASVF 309

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                   +F A  Q+PQ  KQ+ +A+ F R ++I P FR ED  ++R   EF  LD+EM
Sbjct: 310 KVDYFKGNAFLA--QSPQLAKQMAIAADFGRVYEIGPVFRAEDSNTNRHMTEFTGLDLEM 367

Query: 242 SFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY--DDAIRRYGTDKPDLRNPII 298
           +F E   ++++ +  +   +F E     +     +R  Y  DD +      + D R  I 
Sbjct: 368 AFQEHYHEVVDLLNQLFMYIFSELPKRYSAEIATVRRQYPADDFLVPEAPVRLDFREAIQ 427

Query: 299 M 299
           M
Sbjct: 428 M 428



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 44/86 (51%), Gaps = 12/86 (13%)

Query: 482 YDLVCNGFEIASGGIRNH----MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           YD    G EI SG  R H    + E + QA   V   K  V+        AF+ G PPH 
Sbjct: 490 YDFFMRGQEILSGAQRVHDAKFLEERLAQAQIPVSAMKHYVD--------AFRLGAPPHA 541

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G++R++ML LG  N+R VSLFP
Sbjct: 542 GGGIGLERVLMLYLGLGNIRRVSLFP 567


>gi|116871612|ref|YP_848393.1| lysyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123460668|sp|A0AF28|SYK_LISW6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116740490|emb|CAK19610.1| lysyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 498

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 80/356 (22%), Positives = 153/356 (42%), Gaps = 45/356 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F  I+D +   Q+    D+    I +   + + L   G ++  
Sbjct: 63  VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAIFKLADLGDIIGI 118

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                  N  TG++ + A    +LS +   LP    G ++  +  R++ R+LDL  +   
Sbjct: 119 KGTIFRTN--TGELSVKATDFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           +N  V R++I+   R  M ++ F+E  TP+L T +    A+ F+          Y L  A
Sbjct: 175 QNRFVMRSKILKYTRDYMDSQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++ +E ++
Sbjct: 234 LELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLV 292

Query: 258 RGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-------GTDKPDLRNPIIMH 300
             V ++  NG T          ++ N+ R+   D ++ Y        T   + R     H
Sbjct: 293 STVCKQV-NGTTEITYGEYKVDLTPNWRRVHMADVVKEYVGVDFWNVTSDEEARELAKKH 351

Query: 301 NV--TEHFVHSE-----FRVFSKILSVNPGYEVWAIP------AKGGGGNRAFCDR 343
           +V  TEH  +       F  + +   + P + V+  P      AK    +  F DR
Sbjct: 352 DVAITEHMTYGHILNEFFETYVEEKLIQPTF-VYGHPVEISPLAKKNKEDERFTDR 406



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG+  G+DR+VMLL  A ++R++ LFP  ++
Sbjct: 457 ALEYGLPPTGGLGIGVDRLVMLLTDAPSIRDILLFPTMKH 496


>gi|269959606|ref|ZP_06173987.1| lysyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269835664|gb|EEZ89742.1| lysyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 510

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 117/243 (48%), Gaps = 25/243 (10%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIIN 150
           G + ++ ++ E+L+ A   PLP        + +R++ R++DL   +   +  V R+++++
Sbjct: 133 GDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMS 191

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 192 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V  E     
Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGST 308

Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEF 311
           ++            + R+   +AI+ Y  D        + D++N  +M ++ +  VH E 
Sbjct: 309 SMPYGEDTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKS-VHVEV 367

Query: 312 RVF 314
             F
Sbjct: 368 EPF 370



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 469 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504


>gi|323340117|ref|ZP_08080382.1| lysine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323092494|gb|EFZ35101.1| lysine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 497

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 124/274 (45%), Gaps = 11/274 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           ++D    V ++G +   R  G + F D++D  G  Q+    D    E+ + +   +    
Sbjct: 54  LNDKDIIVTIAGRMVAKRGKGKVGFADLQDKTGRMQLYIRKD----EVGEDMYHIFKRSD 109

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLD 132
            G  +  + + I  ++  G++ + A K+  LS A   LP    G ++  +  R +Y  L 
Sbjct: 110 LGDFLGITGQVIKTDM--GELTVKATKLTFLSKALRPLPDKYHGLQDIEQIYRQRYLDLI 167

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             R++ +   V R+RI+ ++R  +    F+E  TP+L T +    AR F+          
Sbjct: 168 TNRES-YDRFVNRSRIVTAIRRYLDKNGFLEVETPVLHTQAGGASARPFITHHNALDIEL 226

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G +R ++I   FR+E   +   P EF  L+   ++ +  D+++
Sbjct: 227 Y-LRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTHHNP-EFTMLETYAAYFDFKDVMD 284

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             E + +   +  S+ + V+     + +D   +R
Sbjct: 285 ETEGIFKAAAKVVSDNSIVTYQGTEVNFDKPFKR 318



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP
Sbjct: 455 AMEYGMPPTGGLGIGIDRLVMLLTNAESIRDVLLFP 490


>gi|241998236|ref|XP_002433761.1| lysyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215495520|gb|EEC05161.1| lysyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 580

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 26/272 (9%)

Query: 12  LGVSDVGSFVRLS--GWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIA------ 62
           L    V + VRLS  G VH  R  G  +IF D+R      QV+AN      E A      
Sbjct: 121 LEAGQVLTDVRLSVSGRVHAKRESGTKLIFYDLRGEGTKIQVMANASYYSSEEAFVKMNA 180

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  R + + CI     ++  E    +I+  ++ L A  + +L      P   FG ++  +
Sbjct: 181 KLRRGDILGCIGHPGKTKKGEL---SIVPVEMVLLAPCLHML------PHLHFGLKD--K 229

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RD 179
             RF+ R+LDL   + + +  + R++++N +R    +  F+E  TP++    P GA  + 
Sbjct: 230 ETRFRQRYLDLIMNENVRQKFIMRSKVVNYVRKFFDSMGFLEVETPMMNMI-PGGATAKP 288

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   + 
Sbjct: 289 FITHHNELDMDLY-MRVAPELYLKMLVVGGMDRVYEIGRQFRNEGIDLTHNP-EFTTCEF 346

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
            M++ + +D+++  E +L G+ +  +    V+
Sbjct: 347 YMAYADYNDLMDMTEVMLSGMVKSLTGSYKVT 378


>gi|144208|gb|AAA23029.1| transfer RNA-Lys synthetase [Campylobacter jejuni]
          Length = 501

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 128/281 (45%), Gaps = 17/281 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +  +R  G  IF +I D     Q+  + DS   E+   ++    L +  +V+ +  
Sbjct: 60  VAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKN--LEVGDIVLVKGF 117

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKN 141
             +     TG+  L A ++++ + A  +PLP           R++ R++D+  +  + K+
Sbjct: 118 PFVTK---TGEFSLHASEVKLATKAI-VPLPEKYHGLTDIEQRYRKRYVDMIMNVEVRKD 173

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
            + R+++++ +R     + F+E  TP++   +        V    + G    L  AP+ Y
Sbjct: 174 FLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPELY 233

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+  GF+  F+I  CFR+E       P EF  ++   ++    D+++  E +   + 
Sbjct: 234 LKRLIVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTEELFALLL 292

Query: 262 EEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293
           ++ + G T+         S  F RI Y DA+ +YG    DL
Sbjct: 293 DKLNLGKTIEFDGKMINFSKPFERITYKDALCKYGGLDRDL 333



 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL   K++R+V LFP
Sbjct: 453 ALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFP 488


>gi|50955651|ref|YP_062939.1| lysyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50952133|gb|AAT89834.1| lysyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 504

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 8/193 (4%)

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
           S E I++    G++ + A   +I S A  LPLP     E  E  R + R+LDL  RD   
Sbjct: 130 SGEVISSR--RGELSIMAVGWQIASKAI-LPLPNL-HNELSEETRVRSRYLDLIARDRAR 185

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +N++ R   + S+R       FIE  TP+L        AR F+  S       + L  AP
Sbjct: 186 RNVLDRAAAVASLRTTFADSGFIEVETPMLQVMHGGASARPFVTHSNAFDTELF-LRIAP 244

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y +  +  G DR F+I   FR+E   S  LP EF  L+   ++ + + I +  + +++
Sbjct: 245 ELYLKRAVVGGIDRVFEINRNFRNEGADSTHLP-EFAMLEAYQAYGDYNTIADLTQALIQ 303

Query: 259 GVFEEFSNGNTVS 271
                 S  + V+
Sbjct: 304 NAAVAVSGSHVVT 316



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL------YRAFQCGMP 534
           ++DL   GFE+A+G   + + + ++Q    V  ++         +       RA + GMP
Sbjct: 416 KWDLYMRGFELATG--YSELVDPVVQRERFVEQARLAAAGDDEAMRLDEEFLRALEFGMP 473

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR++M L G   +RE  LFP+
Sbjct: 474 PTGGMGMGIDRLLMALTGL-GIRETILFPL 502


>gi|71280476|ref|YP_270737.1| lysyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|123747345|sp|Q47WT5|SYK_COLP3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71146216|gb|AAZ26689.1| lysyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 524

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 124/281 (44%), Gaps = 47/281 (16%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEW-------VLCIDGLVMSRSAETINANII 90
           FL I+D  G  Q  A        + K +R++W       ++ I G ++ +S +       
Sbjct: 82  FLVIQDSSGRIQGYAEK-----TVQKEIRAKWGSLDIGDIVGIKG-ILHKSGK------- 128

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
            G + ++     +L+ +   PLP        +  +++ R++DL  +   +N  K R++I+
Sbjct: 129 -GDLYVNMDHYSLLTKSLR-PLPEKFHGLSDQETKYRQRYIDLIINEDTRNTFKMRSKIV 186

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
             +R  +   +F+E  TP+L    P GA  + F+          Y L  AP+   + L+ 
Sbjct: 187 AGIRNFLTQRDFMEVETPMLQII-PGGATAKPFMTHHNTFDLDMY-LRIAPELNLKRLVV 244

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            GFDR F+I   FR+E   +   P EF  ++   ++ +  D++NT E +LR + ++    
Sbjct: 245 GGFDRVFEINRSFRNEGISTRHNP-EFTMIEFYQAYADYHDLMNTTEEMLRTIAQDVLGT 303

Query: 268 NTVSNN-------------------FLRICYDDAIRRYGTD 289
            T+ N                    F+R+   DAI +YG D
Sbjct: 304 TTIRNTVKNSEGEVVEEKFYDLGKPFVRLSMVDAILQYGKD 344



 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-R 527
           ND  S    +++    G E+A+G    + +E   + F      K+  ++    +   Y  
Sbjct: 422 NDENSFITDRFEFFVGGRELANGFSELNDAEDQAERFQKQVAEKDAGDDEAMHYDADYIN 481

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   +  +++V LFP
Sbjct: 482 ALEYGLPPTAGEGIGIDRLVMLFTDSPTIKDVILFP 517


>gi|16716381|ref|NP_444322.1| lysyl-tRNA synthetase isoform 2 [Mus musculus]
 gi|20178134|sp|Q99MN1|SYK_MOUSE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|13345380|gb|AAK19309.1| lysyl-tRNA synthetase [Mus musculus]
 gi|23273634|gb|AAH36289.1| Lysyl-tRNA synthetase [Mus musculus]
 gi|74198517|dbj|BAE39740.1| unnamed protein product [Mus musculus]
          Length = 595

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ ++
Sbjct: 124 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 183

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +  Q+I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 184 G---------NPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 232

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 233 ILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 291

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 292 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 349

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E +L G+ +  +    ++
Sbjct: 350 EITEKMLSGMVKSITGSYKIT 370



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 534 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 569


>gi|327474921|gb|EGF20326.1| asparagine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 448

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMKIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +++GV +                   ++  F RI YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRISYDEAI 295



 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++   + +G+  +  E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNELGM--DTTEYEFYLDLRKY--GTVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|194760041|ref|XP_001962250.1| GF14536 [Drosophila ananassae]
 gi|190615947|gb|EDV31471.1| GF14536 [Drosophila ananassae]
          Length = 427

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 6/110 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62
           RTH CG+L  ++V   V + GW+   R +    F  ++D YG TQV+  P +   E  + 
Sbjct: 312 RTHHCGELSFNEVNQNVVICGWLAFQRMNK---FFILKDAYGKTQVIVMPKTKGLEDYVG 368

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELP 111
             V  + +L ++G V  R   T+N  ++TG IE+ A ++ +L +   ELP
Sbjct: 369 NDVPVDTLLLVEGTVFGRPPSTLNPKMLTGDIEVKADRVTVLQLDNNELP 418



 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 4/110 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +CGDL   DVG+ V L GW+  ++ +    FL ++D +G TQ+  + D +   +  S
Sbjct: 169 RDLTCGDLRRDDVGTTVTLVGWIPFIKSNK---FLQLKDGHGQTQLTVD-DVSIMSVFTS 224

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            + + V  I G V+SR    +N   +TG+IE+     ++++  E    P+
Sbjct: 225 AQMQSVFQIVGKVVSRPPVNVNLKYVTGEIEVCVTSAKVINPYEPYEGPI 274


>gi|322385688|ref|ZP_08059332.1| asparagine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321270426|gb|EFX53342.1| asparagine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 448

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 112/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F+  K +
Sbjct: 15  VGEEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E +
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYN 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           FV  D+ L+  E     +++GV +                   V+  F R+ YD+AI
Sbjct: 239 FVTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYVAEPFKRVTYDEAI 295



 Score = 40.4 bits (93), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++   + +G+  +  E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNELGM--DTTEYEFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|281201920|gb|EFA76128.1| lysine-tRNA ligase [Polysphondylium pallidum PN500]
          Length = 539

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 7/184 (3%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           TGQ+ L   ++ +LS    + LP  G+    +  RF+ R+LD+   + + +N V R+++I
Sbjct: 136 TGQLSLFTTEVVLLSPCLHM-LPKPGQGLTDQETRFRQRYLDMIVNNNVKRNFVIRSKVI 194

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR-VNQGSFYALPQAPQQYKQLLMA 207
             +R  +    F+E  TP++   +    A+ F+     +N   F  +  AP+ Y + L+ 
Sbjct: 195 QGVRRYLDNLGFVEVETPMMNMIAGGAAAKPFVTHHNCLNLNLFMRI--APELYLKQLVV 252

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            G DR ++I   FR+ED      P EF   +  M++ + +D++   E +L  + E+    
Sbjct: 253 GGMDRVYEIGKQFRNEDIDHTHNP-EFTTCEFYMAYADYNDLMTITEEMLARIVEDIHGS 311

Query: 268 NTVS 271
             + 
Sbjct: 312 KKIK 315



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   G+DR VMLL    N++EV LFP
Sbjct: 476 SLEYGLPPTGGWGLGVDRFVMLLCDVYNIKEVILFP 511


>gi|227533061|ref|ZP_03963110.1| Lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227189312|gb|EEI69379.1| Lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 508

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 141/338 (41%), Gaps = 43/338 (12%)

Query: 2   HRY-RTHSCG----DLGVSDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH+      + G  D  +       V ++G +   R  G + F DIRD  G  Q+
Sbjct: 45  HRFDRTHTAAKVREEFGEDDKETLLDEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 104

Query: 51  VANPD---SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
               D      + I K      +L I G VM            T   EL+ +   +  +A
Sbjct: 105 YVRKDVVGDDNYMIFKKADLGDILGISGEVMK-----------TDSGELTVKANHVTHLA 153

Query: 108 EEL-PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           + L PLP           +++ R+LDL    D+  +  VKRT+I++++R  +    F+E 
Sbjct: 154 KALRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDR-FVKRTKIVSAVREYLDNNGFLEV 212

Query: 165 STPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP+L   +    AR F+          Y L  A + + + L+  G +R ++I   FR+E
Sbjct: 213 ETPVLHNQAGGANARPFVTHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNE 271

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------F 274
              +   P EF +L+   ++ +  D++   E + R    +  +   ++           F
Sbjct: 272 GIDTKHNP-EFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLTYQGMAIDLDAPF 330

Query: 275 LRICYDDAIR-RYGTD-KPDLRNPIIMHNVTEHFVHSE 310
            RI   DAI+ + G D  P++          EH VH E
Sbjct: 331 ARINMLDAIKDKTGVDFWPEMSVDDARKLADEHDVHYE 368



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 8/52 (15%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GI  + VE        A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 461 GIDDDYVE--------ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 504


>gi|195963321|ref|NP_001124340.1| lysyl-tRNA synthetase isoform 1 [Mus musculus]
 gi|20072717|gb|AAH27356.1| Kars protein [Mus musculus]
 gi|148679577|gb|EDL11524.1| mCG141545, isoform CRA_a [Mus musculus]
          Length = 624

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ ++
Sbjct: 153 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 212

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +  Q+I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 213 G---------NPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 261

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 262 ILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 320

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 321 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 378

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E +L G+ +  +    ++
Sbjct: 379 EITEKMLSGMVKSITGSYKIT 399



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 563 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 598


>gi|88597300|ref|ZP_01100535.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|121612659|ref|YP_001000112.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005070|ref|ZP_02270828.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|205355949|ref|ZP_03222717.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|218562059|ref|YP_002343838.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|8928543|sp|P41258|SYK_CAMJE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229804|sp|A1VYC1|SYK_CAMJJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|87250122|gb|EAQ73080.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|88190361|gb|EAQ94335.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359765|emb|CAL34551.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|205346073|gb|EDZ32708.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|284925672|gb|ADC28024.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315926687|gb|EFV06066.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315929054|gb|EFV08292.1| Lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 501

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 128/281 (45%), Gaps = 17/281 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +  +R  G  IF +I D     Q+  + DS   E+   ++    L +  +V+ +  
Sbjct: 60  VAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKN--LEVGDIVLVKGF 117

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKN 141
             +     TG+  L A ++++ + A  +PLP           R++ R++D+  +  + K+
Sbjct: 118 PFVTK---TGEFSLHASEVKLATKAI-VPLPEKYHGLTDIEQRYRKRYVDMIMNVEVRKD 173

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
            + R+++++ +R     + F+E  TP++   +        V    + G    L  AP+ Y
Sbjct: 174 FLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPELY 233

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+  GF+  F+I  CFR+E       P EF  ++   ++    D+++  E +   + 
Sbjct: 234 LKRLIVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTEELFALLL 292

Query: 262 EEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293
           ++ + G T+         S  F RI Y DA+ +YG    DL
Sbjct: 293 DKLNLGKTIEFDGKMINFSKPFERITYKDALCKYGGLDRDL 333



 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL   K++R+V LFP
Sbjct: 453 ALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFP 488


>gi|300933244|ref|ZP_07148500.1| lysyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 1113

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 15/249 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           H   TH+CG++      +   +SG V   R  GG++FLDI+D  G+ QV+   D      
Sbjct: 620 HPRPTHTCGEVANLAEHTEATISGRVMARRFFGGVLFLDIQDSTGVAQVIVERDHFTGAP 679

Query: 62  A-KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL------PV 114
           A  S+ ++  L  + L    SA  +   +    +   ++K     +A E+ L      P+
Sbjct: 680 AGSSLDTDATLGRNRLEQLESAVDLADLVRVTGVAGKSRKGHPSLLAHEVNLEAKSLHPL 739

Query: 115 FGER---EYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
             +R   + PE+ R + R LD+  +  + +++  R+ ++N+MR  ++  +++E  TPIL 
Sbjct: 740 PDKRKGLQNPET-RLRNRHLDMTLNPGVMQSLRTRSAVLNAMRSELVQRDYLEVETPILQ 798

Query: 171 A-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  AR F           Y L  AP+ Y + LM  G  + F++   FR+E   +  
Sbjct: 799 PIHGGANARPFRTYINAYDMDLY-LRIAPELYLKRLMCGGAPKVFELGRDFRNEGADNKH 857

Query: 230 LPGEFYQLD 238
            P EF  L+
Sbjct: 858 NP-EFTVLE 865



 Score = 45.1 bits (105), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 13/92 (14%)

Query: 481  QYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  + +  L A      + EV E+      RA + G
Sbjct: 1025 RWDLVAFGMELGTAYSELTDPLLQRERLEQQSLLAAGGDAEAMEVDED----FLRALEFG 1080

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            MPP GG+  GIDRI+ML+ G  ++RE   FP+
Sbjct: 1081 MPPAGGLGLGIDRIIMLINGG-SMRENLAFPL 1111


>gi|291514973|emb|CBK64183.1| Lysyl-tRNA synthetase (class II) [Alistipes shahii WAL 8301]
          Length = 572

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 128/289 (44%), Gaps = 35/289 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLV 77
           VR++G +   R  G   F +++DH G  QV    D  C E   ++ +   + +L I   +
Sbjct: 55  VRIAGRIMSRRIMGSASFFELQDHTGRIQVYIRRDDICPEGDPTLYNTVFKKLLDIGDFI 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYR 129
                E    +  TG++ +  +K  +LS +   PLPV  E++         PE +R++ R
Sbjct: 115 ---GVEGFVFHTNTGELSVHCRKFTVLSKSIR-PLPVVKEKDGKTFDAFTDPE-VRYRQR 169

Query: 130 FLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRV 186
           +LDL  +  + +  V+R RI+ +MR       +IE  TPIL    P G  AR F+     
Sbjct: 170 YLDLIVNPQVKETFVRRARIMATMREFFNERGYIEVETPIL-QPIPGGASARPFITHHNS 228

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME------ 240
                Y L  A + Y + L+  GFD  ++    FR+E       P EF  +++       
Sbjct: 229 LDIDLY-LRIATELYLKKLIVGGFDGVYEFGKNFRNEGMDRTHNP-EFTCMEIYVAYKDY 286

Query: 241 ---MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIR 284
              M F EQ  +L  +   + G  E   +G  +S    F R+   DAIR
Sbjct: 287 LWMMEFTEQ--MLERVAMAVNGTTELTIDGKPISFKAPFRRLTMTDAIR 333


>gi|261492266|ref|ZP_05988829.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494487|ref|ZP_05990973.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261309871|gb|EEY11088.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261312045|gb|EEY13185.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 500

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 122/282 (43%), Gaps = 27/282 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V+++G +   R  G   F  I+D  G  Q+    D+    + +   S W    ++ ++G 
Sbjct: 64  VKVAGRIMLKRVMGKASFFTIQDVSGAIQLYVARDNLSDSVYEEKVSLWDLGDIVGVEGA 123

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           +             TG++ +   ++++L+ +   PLP           R++ R+LDL   
Sbjct: 124 LFKTK---------TGELTVRCSEVQLLTKSLR-PLPDKHHGLTDLETRYRQRYLDLISN 173

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
           +   +  + R+++++ +R   +  +FIE  TP+L        A+ F+          Y L
Sbjct: 174 EESRRTFMIRSQVVSGIRKFFLERDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMY-L 232

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+R F++   FR+E       P EF  ++   ++ +  D+++  E
Sbjct: 233 RIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYADYHDLMDNTE 291

Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
            +LR +  +      V            F RI   DAI +YG
Sbjct: 292 ELLRQLALDILGTTDVPYGDYVFDFGKPFERITMHDAIVKYG 333



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M+   A ++R+V LFP
Sbjct: 460 ALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILFP 495


>gi|23270695|gb|AAH35324.1| Kars protein [Mus musculus]
          Length = 622

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ ++
Sbjct: 151 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 210

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +  Q+I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 211 G---------NPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 259

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 260 ILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 318

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 319 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 376

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E +L G+ +  +    ++
Sbjct: 377 EITEKMLSGMVKSITGSYKIT 397



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 561 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 596


>gi|289551683|ref|YP_003472587.1| Lysyl-tRNA synthetase (class II) [Staphylococcus lugdunensis
           HKU09-01]
 gi|289181214|gb|ADC88459.1| Lysyl-tRNA synthetase (class II) [Staphylococcus lugdunensis
           HKU09-01]
          Length = 495

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 125/274 (45%), Gaps = 21/274 (7%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAK 63
           +S  +L   +  S V ++G +   R  G   F  I+D  G  Q+    D      F+I K
Sbjct: 47  YSKEELHDKEAESHVTIAGRLMTKRGKGKAGFAHIQDLSGQIQIYVRKDQVGEEQFDIWK 106

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
                 ++ IDG++   +         TG++ + A+   +LS A   LP    G ++  +
Sbjct: 107 IADLGDIVGIDGVMFKTN---------TGELTVKAKTFTLLSKALRPLPDKFHGLQDIEQ 157

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARD 179
             R++ R+LDL       +  + R++II  MR  +  + F+E  TP++    P G  AR 
Sbjct: 158 --RYRQRYLDLITNKESTQTFIHRSKIIQEMRNYLNNKGFLEVETPMM-HQIPGGAAARP 214

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+        + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++
Sbjct: 215 FVTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIEL 272

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
             ++ +  DI++  E+++R + +E      V  N
Sbjct: 273 YEAYADFHDIMDLTESLIRHIAQEVFGSAKVQYN 306



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490


>gi|289641085|ref|ZP_06473253.1| lysyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289509026|gb|EFD29957.1| lysyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 478

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 132/302 (43%), Gaps = 36/302 (11%)

Query: 4   YRTHSCGDLGVSDV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           YRT S    G  +   G+ VRL+G V   R  GG+IF  I+D  G  QV  + D    E+
Sbjct: 8   YRTDSVA-AGAREAPDGTPVRLAGRVVLWRRMGGLIFGHIQDRSGRVQVSLSRD----EL 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 EW         SR+ +  +   + G++  + +    ++V+ +L +     R  P
Sbjct: 63  GADTIREW---------SRALKIGDFVGVAGRLYTTRRGERTVAVS-DLTVLNRTARALP 112

Query: 122 ES--------IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-A 171
           +          R++ R+LDL   D        RT+ I  +R  +   +F+E  TPIL  A
Sbjct: 113 DKWQGLSNVEARYRRRYLDLLVNDESRARFRTRTKAIQRIRRFLDDNDFLEVETPILQEA 172

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +S   AR F+         FY L  +P+ + + ++   FDR +++   FR+E   S  L 
Sbjct: 173 ASGAAARPFVTHHNALDEDFY-LRISPETFLKRVVVGSFDRVYELGRNFRNEGMDSSHLQ 231

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF  L+   ++ +  D +  +  ++  V ++     TV+       Y+     +G D P
Sbjct: 232 -EFTMLEWYAAYWDYRDNMAFVRELILAVLDDVLGTRTVT-------YEGVKLDFGADWP 283

Query: 292 DL 293
           +L
Sbjct: 284 EL 285



 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G+  GIDR   LL  A  +R+V LFP
Sbjct: 421 AMEYGMPPMSGLGLGIDRFTALLTDAPTLRDVVLFP 456


>gi|206580188|ref|YP_002239893.1| lysyl-tRNA synthetase LysS homolog [Klebsiella pneumoniae 342]
 gi|288936730|ref|YP_003440789.1| lysyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|290510214|ref|ZP_06549584.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|206569246|gb|ACI11022.1| lysyl-tRNA synthetase LysS homolog [Klebsiella pneumoniae 342]
 gi|288891439|gb|ADC59757.1| lysyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|289776930|gb|EFD84928.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 505

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 135/289 (46%), Gaps = 23/289 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G +++ 
Sbjct: 68  VAVAGRMMTRRVMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDIIAA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        + +R++ R+LDL  +   +
Sbjct: 125 RGKLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANEESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  + R++I+ +MR  M+A  F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 HTFRIRSQILATMRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLF 298

Query: 258 RGVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295
           R + +      E   G+ V      F ++   +AI+++   T+  DL N
Sbjct: 299 RTLAQTVLGKTEVPYGDQVFDFGKPFEKLTMREAIKKHRPETNMADLDN 347



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEYGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|167752417|ref|ZP_02424544.1| hypothetical protein ALIPUT_00661 [Alistipes putredinis DSM 17216]
 gi|167660658|gb|EDS04788.1| hypothetical protein ALIPUT_00661 [Alistipes putredinis DSM 17216]
          Length = 574

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 128/286 (44%), Gaps = 29/286 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLV 77
           +R++G +   R  G   F +++DH G  QV    D  C E   ++ +   + +L I  +V
Sbjct: 55  IRIAGRIMSRRIMGSASFFELQDHTGRIQVYIRRDDICPEGDPTLYNTVFKKLLDIGDIV 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYR 129
                E       TG++ +  QK+ +LS +   PLPV  E++         PE IR++ R
Sbjct: 115 ---GVEGFAFRTNTGELSVHCQKLTLLSKSLR-PLPVVKEKDGQTFDAFTDPE-IRYRQR 169

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL  +   + + +KR++II++MR       ++E  TPIL        AR F+      
Sbjct: 170 YVDLIVNPHVREVFIKRSKIISTMREYFNQFGYVEVETPILQPIPGGAAARPFITHHNAL 229

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A + Y + L+  GFD  ++    FR+E       P EF  +++ +++ +  
Sbjct: 230 DIDQY-LRIASELYLKKLIVGGFDGVYEFGKNFRNEGMDRTHNP-EFTVMEIYVAYKDYL 287

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
            ++   E +L  V        TV  +         F R+   DAIR
Sbjct: 288 WMMEFTERMLEKVALALHGTTTVQIDGREISFKAPFRRLTMTDAIR 333



 Score = 38.5 bits (88), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 23/37 (62%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMP   G+  GIDR+ M + G  ++++V  FP
Sbjct: 460 RALEYGMPTCSGMGIGIDRLTMFMTGNSSIQDVLFFP 496


>gi|325142613|gb|EGC65005.1| lysyl-tRNA synthetase [Neisseria meningitidis 961-5945]
          Length = 503

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    ++ N         F R+   +AI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  E   + F +    K+  ++    +   Y RA + G+PP 
Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|284043972|ref|YP_003394312.1| lysyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283948193|gb|ADB50937.1| lysyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 1118

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 123/295 (41%), Gaps = 31/295 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SACFEIAKSVRSEWV 70
           ++ G  V+++G V  +R HGG+ F D+ D  G  Q++A  D     A  + A     +WV
Sbjct: 71  TETGETVKVAGRVTALRRHGGLDFADLLDETGTIQLLAERDELGEQALEDFAALDLGDWV 130

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
                +V S+S          G++ +   +  +LS A   PLP           R++ R+
Sbjct: 131 GAEGTVVASKS----------GELTVRLARFALLSKALR-PLPDLRHGLTDPEARYRRRY 179

Query: 131 LDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           +DL  +   + +   R+  I+++R  +    F E  TP+L   +   A    +       
Sbjct: 180 VDLVVNPRARAVFAARSVAISAVRRVLTERGFREVETPVLLGQAGGAAAKPFLTHHNALD 239

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
              +L  A +   + L+  G DR F+I   FR+E   +   P EF  L+   +F +  D+
Sbjct: 240 IEMSLRIALELPLKRLLVGGMDRVFEIGRVFRNEGLDTRHNP-EFTLLEAYQAFGDYSDM 298

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +   E ++       +NG TV              R G  + DLR P     +T+
Sbjct: 299 MELTETLVSEA-ALAANGTTVV-------------RVGEREIDLRPPFRRARMTD 339



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 29/37 (78%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + G+PP GG+  GIDR++ML+ G +++R+V LFP
Sbjct: 470 QALEYGLPPTGGLGIGIDRLIMLITGVESIRDVILFP 506


>gi|257421557|ref|ZP_05598547.1| lysyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|257163381|gb|EEU93341.1| lysyl-tRNA synthetase [Enterococcus faecalis X98]
          Length = 485

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 21/267 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59
           +Y  H+  +L  S++ + V ++G +   R  G   F  ++D  G  Q+    D      +
Sbjct: 50  QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+ K         + G +M  +         TG++ + AQ I +L+ A   PLP      
Sbjct: 108 ELFKHADLGDFFGVTGQIMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157

Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                R++ R+LDL   +++  +  +KR++II+ +R  +    ++E  TP+L   +    
Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P EF  
Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263
           L+   ++ +  D+++  E ++R   E+
Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNAAEK 301


>gi|162449905|ref|YP_001612272.1| lysine--tRNA ligase [Sorangium cellulosum 'So ce 56']
 gi|161160487|emb|CAN91792.1| Lysine--tRNA ligase [Sorangium cellulosum 'So ce 56']
          Length = 573

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 115/242 (47%), Gaps = 16/242 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGLVMSR 80
           R++G V  VR  GG+ F+ +RD  G  Q+     S A FE  + +     +   G+ M+ 
Sbjct: 107 RVAGRVLFVRSFGGVTFVRLRDRTGELQLYCEQGSLADFERLEDIDLGDFVEAHGVAMAT 166

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ + A ++ +L+ A   PLP     +  ES R++ R++DL  +    
Sbjct: 167 Q---------KGELSIRAGRLRLLTKAYR-PLPTKTSFKDVES-RYRMRYVDLVANPHVA 215

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAP 198
            + + RT I+ ++R  + A  F+E  TP + T      A+ F           + +  AP
Sbjct: 216 GVFRARTAIVAALRGFLDARGFLEVETPTMHTLVGGAAAKPFKTHHNALDLELF-MRIAP 274

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+  GF+R ++IA C+R+E   S R   EF  L+   ++   + +++  E +LR
Sbjct: 275 ELFLKRLVVGGFERVYEIARCYRNEG-LSTRHNPEFTMLEYYQAYATYETLMDATEAMLR 333

Query: 259 GV 260
            V
Sbjct: 334 HV 335



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 29/44 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           RA + G+PP  G   G+DR+ MLL GA ++R+V LFP+ +   D
Sbjct: 529 RALEHGLPPTAGFGMGVDRLTMLLTGATSIRDVILFPLLRPETD 572


>gi|312901060|ref|ZP_07760349.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|311291806|gb|EFQ70362.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0470]
          Length = 467

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 121/267 (45%), Gaps = 21/267 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59
           +Y  H+  +L  S++ + V ++G +   R  G   F  ++D  G  Q+    D      +
Sbjct: 50  QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+ K         + G VM  +         TG++ + AQ I +L+ A   PLP      
Sbjct: 108 ELFKHADLGDFFGVTGQVMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157

Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                R++ R+LDL   +++  +  +KR++II+ +R  +    ++E  TP+L   +    
Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P EF  
Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263
           L+   ++ +  D+++  E ++R   E+
Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNAAEK 301


>gi|239995056|ref|ZP_04715580.1| lysyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 522

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 118/238 (49%), Gaps = 14/238 (5%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ ++D  G  Q  A+ D+      K++++++     G ++  + +   +    G + ++
Sbjct: 76  FMLLQDMTGRIQAYADKDTQ-----KALKAKYGALDIGDIIGVAGDLHKSG--KGDLYVN 128

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
            ++ E+L+ A   PLP        +  +++ R++DL   +   K  + R++I+N +R  +
Sbjct: 129 MEQYELLTKALR-PLPEKFHGLSDQETKYRQRYVDLITSEQTRKTFMIRSKIVNGIRNYL 187

Query: 157 IAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
              +++E  TP+L    P GA  + F+          Y L  AP+ Y + L+  GF+R F
Sbjct: 188 TERDYLEVETPMLQVI-PGGATAKPFVTHHNALDIDMY-LRIAPELYLKRLVVGGFERVF 245

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN 272
           +I   FR+E   +   P EF  L+   ++ + +D++N  E++LR + E+    + + N
Sbjct: 246 EINRNFRNEGLSTRHNP-EFTMLEFYQAYADYNDLMNLTEDMLRTLAEDILGTSIIKN 302



 Score = 42.0 bits (97), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G E+A+G    +  E   + F+     K+  ++    F   Y RA + G+PP 
Sbjct: 419 RFEFFVGGRELANGFSELNDPEDQAERFAKQVEEKDAGDDEAMHFDDDYIRALEYGLPPT 478

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+ ML   +  +++V LFP
Sbjct: 479 AGEGIGIDRLAMLFTDSSTIKDVILFP 505


>gi|26355297|dbj|BAC41133.1| unnamed protein product [Mus musculus]
          Length = 595

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ ++
Sbjct: 124 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 183

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +  Q+I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 184 G---------NPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 232

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 233 ILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNII-PGGAEAKPFITYHNELDMN 291

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 292 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 349

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E +L G+ +  +    ++
Sbjct: 350 EITEKMLSGMVKSITGSYKIT 370



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 534 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 569


>gi|116493270|ref|YP_805005.1| lysyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122265266|sp|Q03E09|SYK_PEDPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116103420|gb|ABJ68563.1| Lysyl-tRNA synthetase (class II) [Pediococcus pentosaceus ATCC
           25745]
          Length = 498

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 132/312 (42%), Gaps = 39/312 (12%)

Query: 2   HRY-RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH    L           + + G    ++G +   R  G + F D++D  G  Q+
Sbjct: 33  HRFERTHLAAQLHEKYSDMTKEELDEQGVVATIAGRMISKRGKGKVGFADLKDRSGKMQL 92

Query: 51  VANPDSACFEIAKSVRSEWV---LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
               D    ++ K  +   +   L + G VM             G++ +    +  LS A
Sbjct: 93  YVRKDVLGEDVYKVFKRSDIGDFLGVTGDVMKTD---------MGELTIKVTGLTFLSKA 143

Query: 108 EELPLP-VFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
              PLP  F   +  E I ++ R+LDL   D       KRT+I++++R  +   +F E  
Sbjct: 144 LR-PLPDKFHGLQNVEQI-YRQRYLDLIANDDSMDRFRKRTKIVSAVRRYLDGNDFAEVE 201

Query: 166 TPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
           TP+L T +    AR F+        + Y L  A + + + L+  G +R ++I   FR+E 
Sbjct: 202 TPVLHTQAGGASARPFITHHNALDINLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEG 260

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFL 275
             +   P EF  L+   ++ +  D+++  E + +      S+   ++          +F 
Sbjct: 261 IDTRHNP-EFTMLETYAAYFDFHDVMDETEGIFKAAVAAVSDDGKITYQGTELDLGQDFE 319

Query: 276 RICYDDAIRRYG 287
           R+   DAI++Y 
Sbjct: 320 RLHMVDAIKKYA 331



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 8/52 (15%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GI ++ +E        A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 449 GIDEDYIE--------ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 492


>gi|322377029|ref|ZP_08051522.1| asparagine--tRNA ligase [Streptococcus sp. M334]
 gi|321282836|gb|EFX59843.1| asparagine--tRNA ligase [Streptococcus sp. M334]
          Length = 447

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 114/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+          +  F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGAEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDVEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|329121809|ref|ZP_08250425.1| lysine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327468082|gb|EGF13570.1| lysine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 500

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 22/262 (8%)

Query: 6   THSCGDL-----GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           TH   D+      + + G  VRL+G +  +R HG   F  +RD     Q+    D     
Sbjct: 38  THRAADVLENAQALEESGEHVRLAGRLMLIRDHGKTAFAVLRDDRSDIQLYFRKDELT-- 95

Query: 61  IAKSVRSEWVL--CID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
                 +EW L   +D G ++         +  TG+  +      IL+     P+P    
Sbjct: 96  -----ENEWALYKLLDMGDIIGVEGTVFKTH--TGETTIRVSTYTILTKTLR-PMPEKWH 147

Query: 118 REYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
               +  R++ R++DL     +    +KRT+++N++R       F+E  TP+L       
Sbjct: 148 GLTDKEQRYRMRYVDLICNPQVKDTFIKRTKMLNAIRKWYTDHGFLEVETPVLQPLYGGA 207

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+        + Y L  AP+ Y + L+  G DR F+I   FR+E   +   P EF 
Sbjct: 208 NARPFVTHLNAMDMTMY-LRIAPELYLKRLVVGGIDRVFEITRNFRNEGMDAKHNP-EFT 265

Query: 236 QLDMEMSFVEQDDILNTMENVL 257
            ++   ++ + +D ++  E ++
Sbjct: 266 AMESYQAYGDIEDAIHQTEEIV 287



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           R+ + GMPP GG+  G+DR+ ML+ G+ ++R+V  FP
Sbjct: 449 RSLEYGMPPTGGLGIGLDRLFMLMTGSHSIRDVIFFP 485


>gi|325134355|gb|EGC57000.1| lysyl-tRNA synthetase [Neisseria meningitidis M13399]
          Length = 503

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    ++ N         F R+   +AI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|307708373|ref|ZP_07644840.1| asparaginyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307615819|gb|EFN95025.1| asparaginyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 447

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F+I K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDIIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|302876581|ref|YP_003845214.1| lysyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307687256|ref|ZP_07629702.1| lysyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302579438|gb|ADL53450.1| lysyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 508

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 154/356 (43%), Gaps = 42/356 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R HG   F DI D YG  Q+    D+   E  K  ++  +    G  +S 
Sbjct: 70  VVVAGRLMSKRVHGKAGFCDIHDRYGKLQLHVKIDNIGEEKLKKFKTLDI----GDFISV 125

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLH 139
           + +       TG+I +S    + L+ +   PLP          +R++ R++DL  +  + 
Sbjct: 126 TGKVFKTK--TGEITVSVTDYQPLTKSLR-PLPEKYHGLKDTDLRYRQRYVDLIMNPEVK 182

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  +KR+ II +MR  +    +IE  TPIL+  +    AR F+          Y L  A 
Sbjct: 183 ETFMKRSAIITAMREYLDQHAYIEVETPILSPIAGGAAARPFVTHHNSLDIDMY-LRIAT 241

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF++ ++I   FR+E   S R   EF  +++  ++ + +D++   EN++ 
Sbjct: 242 ELYLKRLIVGGFEKVYEIGRNFRNEGI-SVRHNPEFTMIELYEAYADYNDMMVLTENMVA 300

Query: 259 GVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKPDLRNPIIMHNVT--EHF 306
            + ++      V+           + RI   DA++ Y G D  +++       +   +H 
Sbjct: 301 YICKKVLGTTKVTYQGTEIDFTPPWRRITMVDAVKEYAGVDFNEIKTDEEARQIAKEKHL 360

Query: 307 -VHSEFRVFSKILSVNPGYE------------VWAIP------AKGGGGNRAFCDR 343
            +  E + ++K   +N  YE            ++  P       K   GN AF +R
Sbjct: 361 ELKKELKYYTKGEILNELYEAFGEEHMIQPTFIYDYPVEISPLTKKKRGNEAFTER 416



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VM L  + ++R+V LFP
Sbjct: 467 ALEIGMPPTGGMGMGIDRLVMFLTDSASIRDVLLFP 502


>gi|291086958|ref|ZP_06345000.2| lysine--tRNA ligase [Clostridium sp. M62/1]
 gi|291076478|gb|EFE13842.1| lysine--tRNA ligase [Clostridium sp. M62/1]
          Length = 500

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 36/289 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPD--SACFEIAKSVRSEWVLCID 74
           G  V L+G +   R  G   F +++D  G I   VA  D     ++  K +    ++ I 
Sbjct: 61  GKEVSLAGRMMSKRVMGKASFCNLQDLQGNIQSYVARDDIGEEAYKDFKKLDIGDIIGIR 120

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G+V             TG+I + A+ +E+LS + ++ LP          +R++ R++DL 
Sbjct: 121 GVVFKTK---------TGEISIHAKSVELLSKSLQI-LPEKFHGLTNTDMRYRQRYVDLI 170

Query: 135 RD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +  +    +KR++I+  +R  +   NF+E  TP+L A++  GA      +R  Q  F A
Sbjct: 171 MNPEVKDTFIKRSQIVKEIRNFLDGRNFMEVETPVLVANAG-GAN-----ARPFQTHFNA 224

Query: 194 LPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           L +      + + Y + L+  G +R ++I   FR+E   +   P EF  L++  +F   +
Sbjct: 225 LDEDVNLRISLELYLKRLIVGGMERVYEIGRVFRNEGTDTKHNP-EFTLLEVYQAFTNYE 283

Query: 248 DILNTMENVLR-------GVFEEFSNGNTV--SNNFLRICYDDAIRRYG 287
            ++   E + R       G  +   +G  +     F RI   DA+++Y 
Sbjct: 284 GMMELTETMFREVARKVLGTLQVEYDGEIIDLEKPFARITMIDAVKQYS 332



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 26/41 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A   GMPP GG+  GIDR VMLL  +  +R+V LFP  ++ 
Sbjct: 458 ALMIGMPPTGGLGIGIDRFVMLLTNSYAIRDVLLFPTMKSL 498


>gi|26354188|dbj|BAC40722.1| unnamed protein product [Mus musculus]
          Length = 595

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ ++
Sbjct: 124 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 183

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +  Q+I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 184 G---------NPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 232

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 233 ILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 291

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 292 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 349

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E +L G+ +  +    ++
Sbjct: 350 EITEKMLSGMVKSITGSYKIT 370



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 534 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 569


>gi|148679580|gb|EDL11527.1| mCG141545, isoform CRA_d [Mus musculus]
          Length = 633

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ ++
Sbjct: 153 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 212

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +  Q+I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 213 G---------NPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 261

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 262 ILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 320

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 321 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 378

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E +L G+ +  +    ++
Sbjct: 379 EITEKMLSGMVKSITGSYKIT 399



 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 572 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 607


>gi|296314356|ref|ZP_06864297.1| lysine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296838911|gb|EFH22849.1| lysine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 503

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 126/278 (45%), Gaps = 22/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  I+D  G  Q+  N      EI     + W L   G ++  
Sbjct: 68  VKIAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEILDDF-NHWDL---GDIVGA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N   G++ +    I +LS +   PLP   +    +  +++ R++DL  +   +
Sbjct: 124 EGTLFKTN--HGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKYRQRYVDLIANEESR 180

Query: 141 NI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQA 197
           N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+          Y L  A
Sbjct: 181 NTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTHHNALDIPLY-LRIA 238

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F + + ++   E+++
Sbjct: 239 PELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAFSDYERMMQMAEDII 297

Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           R      +    ++ N         F R+   +AI++Y
Sbjct: 298 RNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  E   + F      K+  ++    +   Y RA + G+PP 
Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKTQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|282878146|ref|ZP_06286943.1| asparagine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299724|gb|EFA92096.1| asparagine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 489

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/323 (21%), Positives = 128/323 (39%), Gaps = 55/323 (17%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  +D G  V + GWV   R    + F+ + D   I   Q+V +P     +  
Sbjct: 28  RTKVVDVLKSTDFGKEVVVKGWVRTHRSSKAVDFIALNDGSTIKNIQIVVDPSKINADTL 87

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSV-AEELPLPVFGER-E 119
           KS+ +   LC+ G ++    +        GQ +E+  Q IE+  +   + P+   G+  E
Sbjct: 88  KSITTGACLCVTGTLVESQGK--------GQSVEIQCQDIEVYGLCGSDYPMQKKGQSFE 139

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           Y      ++  + LR +T    +  R  +  ++        F    TP++TAS  EGA +
Sbjct: 140 YMR----QHAHMRLRTNTFGAVMRIRHNMAFAIHQYFHEHGFFYFHTPLITASDAEGAGE 195

Query: 180 FLVPSRVN--------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRD 222
               +  N              +  F+    +     QL   L A+   + +   P FR 
Sbjct: 196 MFQVTTQNLNDLKKGEDGKVSYEDDFFGKMTSLTVSGQLEGELGATALGQIYTFGPTFRA 255

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG----- 267
           E+  + R   EF+ ++ E++F+   D+++  E+ ++              +F N      
Sbjct: 256 ENSNTPRHLAEFWMIEPEIAFIALPDLMDLEEDFIKYCVRWALDNCKDDLDFLNSMIDKT 315

Query: 268 ------NTVSNNFLRICYDDAIR 284
                   + N+F+R+ Y D I+
Sbjct: 316 LLERLQGVLKNDFVRLTYTDGIK 338


>gi|15677284|ref|NP_274437.1| lysyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|32130177|sp|Q9JYU6|SYK_NEIMB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|7226664|gb|AAF41786.1| lysyl-tRNA synthetase, heat inducible [Neisseria meningitidis MC58]
 gi|316984545|gb|EFV63510.1| lysyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325140370|gb|EGC62891.1| lysyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325199958|gb|ADY95413.1| lysyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 503

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    ++ N         F R+   +AI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  E   + F    + K+  ++    +   Y RA + G+PP 
Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKAQVVQKDAGDDEAMHYDADYIRAMEFGLPPT 471

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|260220768|emb|CBA28663.1| Lysyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 592

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 106/232 (45%), Gaps = 33/232 (14%)

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LH 139
           +AE       TG++ + A  I +L+ +   P+P        +  +++ R++DL  D    
Sbjct: 208 AAEGTLFKTKTGELSIHATSIRLLTKSLR-PMPDKFHGMADQETKYRQRYVDLMTDVESR 266

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY----ALP 195
           K  V R++ ++++R  M++ NF+E  TP+L            +P   N   F     AL 
Sbjct: 267 KRFVARSKAVSALREFMVSHNFLEVETPMLHP----------IPGGANAKPFKTHHNALD 316

Query: 196 Q------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           Q      AP+ Y + L+  GFDR F+I   +R+E   S R   EF  ++   ++    D+
Sbjct: 317 QEMFLRIAPELYLKRLIVGGFDRVFEINRSYRNEGI-SVRHNPEFTMMEFYAAYWNYQDL 375

Query: 250 LNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDKPD 292
           ++  E ++R    + + G  +S           F R+   +AI++Y TD  D
Sbjct: 376 MDYTEKLIRDAARKATGGLQLSYAGKPVDLEQPFERLTIVEAIQKY-TDAGD 426



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR++MLL  + ++R+V LFP
Sbjct: 550 RALEYGMPPTGGCGIGIDRLMMLLTDSASIRDVILFP 586


>gi|307276457|ref|ZP_07557580.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306506937|gb|EFM76084.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2134]
          Length = 498

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 21/267 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59
           +Y  H+  +L  S++ + V ++G +   R  G   F  ++D  G  Q+    D      +
Sbjct: 50  QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+ K         + G +M  +         TG++ + AQ I +L+ A   PLP      
Sbjct: 108 ELFKHADLGDFFGVTGQIMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157

Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                R++ R+LDL   +++  +  +KR++II+ +R  +    ++E  TP+L   +    
Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P EF  
Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263
           L+   ++ +  D+++  E ++R   E+
Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNAAEK 301



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL  A+++R+V LFP
Sbjct: 460 ALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495


>gi|198275661|ref|ZP_03208192.1| hypothetical protein BACPLE_01833 [Bacteroides plebeius DSM 17135]
 gi|198271290|gb|EDY95560.1| hypothetical protein BACPLE_01833 [Bacteroides plebeius DSM 17135]
          Length = 575

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 131/285 (45%), Gaps = 23/285 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV    D  C +  K + +     +  L    
Sbjct: 55  VSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPDENKDLYNVVFKRLLDLGDFV 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             E        G+I + AQK+ +LS +   PLP+        + + E PE +R++ R++D
Sbjct: 115 GIEGFVFRTQMGEISIHAQKLTVLSKSIR-PLPIVKYKDGVAYDKFEDPE-LRYRQRYVD 172

Query: 133 LR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L   D + +  +KR ++ NSMR    ++ +IE  TPIL + +    AR F+         
Sbjct: 173 LVVNDGVKEIFLKRNKVYNSMREYFNSKGYIEVETPILQSIAGGAAARPFITHHNALDIP 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ +++ + + ++
Sbjct: 233 LY-MRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMEIYVAYKDYNWMM 290

Query: 251 NTMENVLRGV------FEEFSNGNTVSN---NFLRICYDDAIRRY 286
              EN++  +        E   G+ V N    F R+   D+I+ +
Sbjct: 291 KFTENMIEKICLDVNGTTEVQVGDNVINFKAPFKRVTMLDSIKEF 335



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VML+ G   ++EV  FP
Sbjct: 460 RALEYGMPPTSGMGIGMDRLVMLMTGQSTIQEVLFFP 496


>gi|195438242|ref|XP_002067046.1| GK24233 [Drosophila willistoni]
 gi|194163131|gb|EDW78032.1| GK24233 [Drosophila willistoni]
          Length = 558

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 119/288 (41%), Gaps = 25/288 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEW 69
           GV+  G  V++ GWVHR+R  G  +IF+ +RD  G  Q V N D  C  +E         
Sbjct: 130 GVAHRGERVKIYGWVHRLRRQGKALIFITLRDGTGFLQCVLN-DLLCQTYEALTLTTESS 188

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           V+    L +    +T       G  E+S    E++ +A           E    ++   R
Sbjct: 189 VVLYGTLKLVPEGKT-----APGGHEMSVDYWELVGLAPAGGADAILNEEAQPDVQLDQR 243

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            + +R +     +  R+ ++ + R   +  ++ E + P L  +  EG           + 
Sbjct: 244 HIMIRGENTSNVLKMRSVVLQAFRAHYLGRDYNEVTPPTLVQTQVEGGSTLFKLQYFGEE 303

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE---- 245
           ++  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+     
Sbjct: 304 AY--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFISFDDL 360

Query: 246 ----QDDILNTMENVLRG-----VFEEFSNGNTVSNNFLRICYDDAIR 284
               +D + + ++ VL+      V+E   +       F R+ Y DAI+
Sbjct: 361 LDRLEDLVCDVVDRVLKSPWGHLVYELNPDFKVPKKPFRRMNYSDAIK 408



 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   SE +L+ +   GI  +     +    R +  G  PHGG   G+
Sbjct: 475 LLPNVGEIVGGSMRIWNSEELLKGYEREGIDPKPY--YWYTDQRVY--GSMPHGGYGLGL 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  LL   ++R+V L+P   + C
Sbjct: 531 ERFICWLLNRYHIRDVCLYPRFLDRC 556


>gi|94993952|ref|YP_602050.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|123080131|sp|Q1J7K5|SYN_STRPF RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|94547460|gb|ABF37506.1| Asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 448

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I F+ +RD     Q VA  P+             F++ K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGHEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +EI+  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKFG-------YELDITDLEIIGESHEYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYATYEFFDQNGFIKFDSPILSENAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGKPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYITEPFKRVSYDDAI 295



 Score = 40.4 bits (93), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ K   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDNYDTLVAKMDELGMDKS--EYDFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|88860264|ref|ZP_01134902.1| lysyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88817462|gb|EAR27279.1| lysyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 511

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 38/284 (13%)

Query: 91  TGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRI 148
           +G+ +L    +E   + + L PLP        +  +++ R++DL  +   +   + R+++
Sbjct: 120 SGKGDLYVDMVEYQLLTKSLRPLPEKFHGLSDQETKYRQRYVDLITNMDTRETFRIRSKV 179

Query: 149 INSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I+ +R  ++  +F+E  TP+L        AR F+          Y L  AP+ Y + L+ 
Sbjct: 180 IDGIRRFLVDRDFMEVETPMLHIIPGGASARPFVTHHNALDIDMY-LRIAPELYLKRLVV 238

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            GF+R F+I   FR+E   +   P EF  ++   ++ +  D++N  E++LR V ++    
Sbjct: 239 GGFERVFEINRNFRNEGLSTRHNP-EFTMIEFYQAYADYIDMMNLTEDMLRTVAQDVLGT 297

Query: 268 ----NTVSNN---------------FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
               NTV N                F R+   DAI +Y    PD + P +  +   HF  
Sbjct: 298 TLIVNTVKNADGEVTDTIEYDFGQPFTRLSMSDAILKYN---PDFK-PEVFKDPENHF-- 351

Query: 309 SEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
            E + ++K L V  P   VW       G  +  C+   E A  +
Sbjct: 352 EELKAYAKQLHVKIPENCVW-------GPGKFLCEIFEETAEHK 388



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 11/91 (12%)

Query: 484 LVCNGFEIASGG--IRNHMSEVMLQAFSNVGISKEVVENRFGG---------LYRAFQCG 532
            + + FE   GG  + N  SE+          S++V E   G            RA + G
Sbjct: 414 FITDRFEFFVGGRELANGFSELNDAQDQAERFSRQVEEKDAGDDEAMHYDEDYIRALEFG 473

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +PP  G   GIDR+VML   +  +++V LFP
Sbjct: 474 LPPTAGEGIGIDRLVMLFTNSSTIKDVLLFP 504


>gi|332140696|ref|YP_004426434.1| lysyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550718|gb|AEA97436.1| lysyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 522

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 118/239 (49%), Gaps = 14/239 (5%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ ++D  G  Q  A+ D+      K++++++     G ++  + +   +    G + ++
Sbjct: 76  FMLLQDMTGRIQAYADKDTQ-----KALKAKYGALDIGDIIGVAGDLHKSG--KGDLYVN 128

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
            ++ E+L+ A   PLP        +  +++ R++DL   +   K  + R++I+N +R  +
Sbjct: 129 MEQYELLTKALR-PLPEKFHGLSDQETKYRQRYVDLITSEQTRKTFMIRSKIVNGIRNYL 187

Query: 157 IAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
              +++E  TP+L    P GA  + F+          Y L  AP+ Y + L+  GF+R F
Sbjct: 188 TERDYLEVETPMLQVI-PGGATAKPFVTHHNALDIDMY-LRIAPELYLKRLVVGGFERVF 245

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +I   FR+E   +   P EF  L+   ++ + +D++N  E++LR + E+    + + N 
Sbjct: 246 EINRNFRNEGLSTRHNP-EFTMLEFYQAYADYNDLMNLTEDMLRTLAEDILGTSIIKNT 303



 Score = 42.0 bits (97), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G E+A+G    +  E   + F+     K+  ++    F   Y RA + G+PP 
Sbjct: 419 RFEFFVGGRELANGFSELNDPEDQAERFAKQVEEKDAGDDEAMHFDDDYIRALEYGLPPT 478

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+ ML   +  +++V LFP
Sbjct: 479 AGEGIGIDRLAMLFTDSSTIKDVILFP 505


>gi|319744609|gb|EFV96959.1| asparagine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 448

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---------NPDSAC--FEIAKSV 65
           VG  V +  WV      G I F+ +RD     Q VA           +S    F++ K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKFG-------YELDITDLEVIGESHEYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II S         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGKPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYIAEPFKRVSYDDAI 295



 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G++K   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDNYDALVAKMDELGMAKS--EYDFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|300861816|ref|ZP_07107896.1| lysine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|300848341|gb|EFK76098.1| lysine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|315145398|gb|EFT89414.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2141]
          Length = 498

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 131/297 (44%), Gaps = 30/297 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59
           +Y  H+  +L  S++ + V ++G +   R  G   F  ++D  G  Q+    D      +
Sbjct: 50  QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+ K         + G +M  +         TG++ + AQ I +L+ A   PLP      
Sbjct: 108 ELFKHADLGDFFGVTGQIMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157

Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                R++ R+LDL   +++  +  +KR++II+ +R  +    ++E  TP+L   +    
Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P EF  
Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           L+   ++ +  D+++  E ++R   E+      ++ +         F R+   DA++
Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAVDLGSPFKRLHMADAVK 331



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL  A+++R+V LFP
Sbjct: 460 ALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495


>gi|169769871|ref|XP_001819405.1| lysine--tRNA ligase KRS1 [Aspergillus oryzae RIB40]
 gi|238487798|ref|XP_002375137.1| lysyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|83767264|dbj|BAE57403.1| unnamed protein product [Aspergillus oryzae]
 gi|220700016|gb|EED56355.1| lysyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 604

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 120/251 (47%), Gaps = 7/251 (2%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           VR++G ++  R  G  +IF DIR      QVV    +A  +++   + E +   D + ++
Sbjct: 125 VRIAGRIYTKRSSGAKLIFYDIRAEGVKVQVVCQAQNAAGDVSFEAQHEHLRRGDVVGIV 184

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                +   N   G++ + A +I +L+     +P   +G ++  +  RF+ R+LDL  + 
Sbjct: 185 GFPGRSNPKNRPDGELSIFASEIVLLAPCLHAIPSEHYGFQDKEQ--RFRQRYLDLIMND 242

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
             +N+ V R++I++ +R      +F+E  TP++ A +        V    +      +  
Sbjct: 243 RSRNVFVTRSKIVSYIRNFFDTRDFVEVETPMMNAIAGGATAKPFVTHHNDLDMNLFMRV 302

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  E +
Sbjct: 303 APELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNLTEEL 361

Query: 257 LRGVFEEFSNG 267
           + G+ +  + G
Sbjct: 362 VSGLVKHVTGG 372



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 538 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 573


>gi|258424447|ref|ZP_05687326.1| lysyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845316|gb|EEV69351.1| lysyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 515

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 130/285 (45%), Gaps = 19/285 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAK 63
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D      F++ K
Sbjct: 67  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 126

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
           +     ++ ++G++   +         TG++ + A+K  +L+ +   LP    G ++  +
Sbjct: 127 NADLGDIVGVEGVMFKTN---------TGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQ 177

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
             R++ R+LDL   +   +  + R++II  MR  +  + F+E  TP++   +    AR F
Sbjct: 178 --RYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPF 235

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +        + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++ 
Sbjct: 236 VTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELY 293

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            ++ +  DI++  E+++R +  E      V  N   I  + A  R
Sbjct: 294 EAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTR 338



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 475 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 510


>gi|322831510|ref|YP_004211537.1| lysyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321166711|gb|ADW72410.1| lysyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 509

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 110/244 (45%), Gaps = 10/244 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + G +   R  G   F+ ++D  G  Q+    D     I      +W L   G ++  
Sbjct: 70  VTVGGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGIYNEQFKKWDL---GDILGA 126

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           + +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 127 TGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLIANEDSR 183

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
              K R++I++ +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 184 KTFKIRSQIMSGIRSFMVENGFMEVETPMMQVIPGGAAARPFITHHNALDIDMY-LRIAP 242

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GFDR F+I   FR+E   S R   EF  +++ M++ +  D++   E + R
Sbjct: 243 ELYLKRLVVGGFDRVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTETLFR 301

Query: 259 GVFE 262
            + E
Sbjct: 302 TLTE 305



 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F++   +K+  ++    +   Y  A + G+PP 
Sbjct: 415 RFEFFIGGREIGNGFSELNDAEDQAQRFADQVSAKDAGDDEAMFYDEDYVTALEHGLPPT 474

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 475 AGLGIGIDRMVMLFTNSHTIRDVILFP 501


>gi|325695942|gb|EGD37833.1| asparagine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 448

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAI 295



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++   + +G+  +  E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNELGM--DTSEYEFYLDLRKY--GTVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|289208168|ref|YP_003460234.1| lysyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943799|gb|ADC71498.1| lysyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 496

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 115/266 (43%), Gaps = 31/266 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F+ +RD  G  Q+ A  DS   E   +    W L      
Sbjct: 57  GIRVTVAGRMIGKRVMGKASFVRLRDQSGDIQLFAQRDSLP-EGVYAAFKHWDL------ 109

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESI--------RFKY 128
                     +I+ GQ  L   K   L+V  +EL L     R  PE          R++ 
Sbjct: 110 ---------GDIVGGQGTLFKTKTGELTVQLDELRLLTKSLRPLPEKFHGLTDQEQRYRQ 160

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSR 185
           R++DL      + + + RTRI+  +R     E+FIE  TP++    P GA  R F     
Sbjct: 161 RYVDLITSPDSRELFRTRTRIVRYIREYFEREDFIEVETPMMQVI-PGGATARPFATHHN 219

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  L+   +FV+
Sbjct: 220 ALDMPLY-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNP-EFTMLEFYEAFVD 277

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS 271
              +++  E +LRG+ E+     T+ 
Sbjct: 278 YHALMDRTETLLRGLCEDVLGTTTIE 303



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E   + F      K+  ++    +   Y RA + G+PP 
Sbjct: 404 RFELFVGGREIANGFSELNDPEDQAERFQAQVAEKDAGDDEAMHYDADYIRALEYGLPPT 463

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 464 AGEGIGIDRLVMLLTNSPSIRDVLLFP 490


>gi|119357536|ref|YP_912180.1| lysyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|119354885|gb|ABL65756.1| lysyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 509

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 32/300 (10%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D    V ++G +  +R  G   F  ++D  G  Q+    D    ++ +S    + L   G
Sbjct: 60  DANETVSVAGRIMTIRKMGKASFFHLQDANGRIQIYLKKD----DVGESSYQTFKLLDIG 115

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----------ESI 124
            ++     T      TG+I + AQ+  +LS +   P+P+  E+E             + +
Sbjct: 116 DIVGVKGYTFKTK--TGEISVHAQEFSLLSKSLR-PIPIAKEKEIDGQKVVYDAFSDKEL 172

Query: 125 RFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182
           R++ R++DL  +  + +  +KR+ I++ MR     + ++E  TPIL        AR F  
Sbjct: 173 RYRQRYVDLIVNPDVRQTFIKRSAIVSFMRGFFTGQGWLEVETPILQPIYGGAAARPFTT 232

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y L  A + Y + L+  GFD  F+ A  FR+E       P EF Q+++ ++
Sbjct: 233 HHNALDMQLY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEGIDRFHNP-EFTQVELYVA 290

Query: 243 FVEQDDILNTMENVLRGVFEEFSN-------GNTVSNN--FLRICYDDAIRRY-GTDKPD 292
           + + + ++  +E +        +N       GN +S    F R+   D+I+ Y G D  D
Sbjct: 291 YKDYEWMMKLVEELFYQTACAVNNSDSVVFLGNDISLKPPFRRLTITDSIKEYCGIDITD 350



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VMLL G  ++R+V  FP
Sbjct: 468 RALEYGMPPCAGLGVGVDRMVMLLTGQDSIRDVIFFP 504


>gi|319949732|ref|ZP_08023760.1| lysyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319436597|gb|EFV91689.1| lysyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 543

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 12/191 (6%)

Query: 90  ITGQI------ELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-RRDTLHKN 141
           +TG++      ELS    E +  A+ L PLPV   +E  E  R + R+ DL  RDT  +N
Sbjct: 149 VTGRVVRSKRGELSVMADEWVLAAKALRPLPV-AHKELSEDTRVRQRYTDLIMRDTARRN 207

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
            + R +++ ++R  +    F+E  TP+L T      AR F+  S       Y L  AP+ 
Sbjct: 208 ALTRIKVVRALRDALEKRGFLEVETPMLQTLHGGAAARPFVTHSNALGLDLY-LRIAPEL 266

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y +  +  G +R F+I   FR+E   S   P EF  L+   ++ + D     +  V++ V
Sbjct: 267 YLKRCVVGGIERVFEINRNFRNEGVDSSHSP-EFAMLETYQAYGDYDTSATMIREVIQEV 325

Query: 261 FEEFSNGNTVS 271
                   TV+
Sbjct: 326 ATAVFGSTTVT 336



 Score = 44.3 bits (103), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSN------VGISKEVVENRFGGLYRAFQCGMP 534
           ++DL   GFE+A+G        +  Q F +       G  + +V +       A + GMP
Sbjct: 450 KWDLYVRGFELATGYSELVDPVIQRQRFEDQARLAAAGDDEAMVLDE--DFLAAMEQGMP 507

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P  G+  GIDR++M L G   +RE  LFPM
Sbjct: 508 PTTGLGMGIDRLLMALTGL-GIRETILFPM 536


>gi|294634836|ref|ZP_06713359.1| lysine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291091772|gb|EFE24333.1| lysine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 418

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 118/269 (43%), Gaps = 26/269 (9%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           TG++ +    I +L+ A   PLP        +  R++ R+LDL   ++  +    R++I+
Sbjct: 46  TGELSIHCHSIRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANESSRETFRTRSKIL 104

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
            ++R  M+ + F+E  TP++    P GA  R F+          Y L  AP+ Y + L+ 
Sbjct: 105 AAIRNFMVNKGFMEVETPMMQVI-PGGASARPFITHHNALDIDMY-LRIAPELYLKRLVV 162

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E + R         
Sbjct: 163 GGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELFR--------- 212

Query: 268 NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL-----SVNP 322
            T+S + L      ++ +YG    D   P I  ++ E   H    + S  L     +   
Sbjct: 213 -TISQDVL----GSSVVQYGDQTFDFSKPFIKMSMKEAICHYRPDIASADLDDMEKACKI 267

Query: 323 GYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
              +     K  G  R  C+  +E A SQ
Sbjct: 268 AESLGIKIEKSWGLGRVQCEIFDETAESQ 296



 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 377 ALEHGLPPTAGLGVGIDRMMMLFTNSHTIRDVILFP 412


>gi|283955126|ref|ZP_06372628.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793339|gb|EFC32106.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 469

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 129/288 (44%), Gaps = 17/288 (5%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D G    ++G +  +R  G  IF +I D     Q+  + DS   E+   ++    L +  
Sbjct: 21  DEGVNAVVAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSIGEELYAILKKN--LEVGD 78

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +V+ +    +     TG+  L A ++++ + A  +PLP           R++ R++D+  
Sbjct: 79  IVLVKGFPFVTK---TGEFSLHASEVKLATKAI-IPLPEKYHGLIDIEQRYRKRYVDMIM 134

Query: 136 DT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           +  + K+ + R+++++ +R     + F+E  TP++   +        V    + G    L
Sbjct: 135 NAEVRKDFLVRSKVVSLIRHFFEDKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFL 194

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+  F+I  CFR+E       P EF  ++   ++    D+++  E
Sbjct: 195 RIAPELYLKRLVVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTE 253

Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293
            +   + ++ + G  +         S  F RI Y DA+ +YG    DL
Sbjct: 254 ELFALLLDKLNLGKAIEFDGKMIDFSKPFERITYKDALCKYGGLDKDL 301



 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL   K++R+V LFP
Sbjct: 421 ALGYGMPPTAGEGIGIDRLVMLLTNKKSIRDVILFP 456


>gi|86149179|ref|ZP_01067411.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85840537|gb|EAQ57794.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
          Length = 501

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 128/281 (45%), Gaps = 17/281 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +  +R  G  IF +I D     Q+  + DS   E+   ++    L +  +V+ +  
Sbjct: 60  VAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKN--LEVGDIVLVKGF 117

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKN 141
             +     TG+  L A ++++ + A  +PLP           R++ R++D+  +  + K+
Sbjct: 118 PFVTK---TGEFSLHASEVKLATKAI-VPLPEKYHGLTDIEQRYRKRYVDMIMNVEVRKD 173

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
            + R+++++ +R     + F+E  TP++   +        V    + G    L  AP+ Y
Sbjct: 174 FLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGIERFLRIAPELY 233

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+  GF+  F+I  CFR+E       P EF  ++   ++    D+++  E +   + 
Sbjct: 234 LKRLIVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTEELFALLL 292

Query: 262 EEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293
           ++ + G T+         S  F RI Y DA+ +YG    DL
Sbjct: 293 DKLNLGKTIEFDGKMINFSKPFERITYKDALCKYGGLDRDL 333



 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL   K++R+V LFP
Sbjct: 453 ALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFP 488


>gi|320335053|ref|YP_004171764.1| Lysyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319756342|gb|ADV68099.1| Lysyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 507

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 120/280 (42%), Gaps = 26/280 (9%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           L+G +  +R  G   F D++D  G  Q+  +  D+A FE  K +    ++ + G      
Sbjct: 68  LAGRITLMRHMGKAAFADLQDERGKIQLHFSKQDTADFEATKKLDLGDIVGVTGFPFVTR 127

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHK 140
                    TGQ+ L     + L V    PLP        E +R + R+LDL   +   +
Sbjct: 128 ---------TGQLTLRVTAWQPL-VKSLHPLPSKFHGLQDEELRARRRYLDLMVTEGARE 177

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPIL--TASSPEGARDFLVPSRVNQGSFYALPQAP 198
             + R+R+I  +R  +  + F+E   P L  TA   E AR F+         F  L  + 
Sbjct: 178 KFLARSRMIRFIRNTLDQQGFVEVEGPTLQVTAGGAE-ARPFMTHHNALSHDF-KLRISL 235

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF++ ++I   +R+E       P EF  L++  ++V+  DI   +E++L 
Sbjct: 236 ELYLKRLLVGGFEKVYEIGRVYRNEGIDRTHNP-EFTMLELYWAYVDYSDIAKLVEDLLS 294

Query: 259 GVFEEFSNGNT---------VSNNFLRICYDDAIRRYGTD 289
           G+  E     T          +  F R+ Y   +R +  D
Sbjct: 295 GLAREVHGSYTFEYGGRTLDFTPPFARVDYLGGLREHVPD 334



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 4/88 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPH 536
           ++++ C+GFE+A+     + +    + F      ++  ++           A + GMPP 
Sbjct: 406 RFEVFCSGFELANAFSELNDALDQRERFEAQSQRRDAGDDEAHAQDEDFLLALEYGMPPA 465

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GG+  GIDR+ MLL G+ ++R+V LFP+
Sbjct: 466 GGLGIGIDRLAMLLTGSDSIRDVLLFPL 493


>gi|32423704|gb|AAP81247.1| lysyl tRNA synthetase [Candidatus Portiera aleyrodidarum]
          Length = 496

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 15/230 (6%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ ++D     Q+  +  +   EI K ++ +W +   G ++    +   + I  G++ L 
Sbjct: 75  FIVVQDVSSNIQLYIDKKTISNEIHKDIK-DWDI---GDIIGAIGDIDKSKI--GELYLL 128

Query: 98  AQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCR 155
            +K  IL+ +   LP    G ++  + IR+++R+LDL     + K    RTRII+++R  
Sbjct: 129 VKKAYILTKSIRHLPSKFHGIKD--QEIRYRHRYLDLIMNKEVRKTFKIRTRIISALRKF 186

Query: 156 MIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
                F+E  TPIL  S P GA  + F   +       Y L  AP+ Y + L+  GF+R 
Sbjct: 187 FYELYFLEAETPIL-HSMPGGAIAKPFETYNYSLNIKLY-LRIAPELYLKRLVVGGFERV 244

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F+I   FR+E   +   P EF  L+   +F    D++   E+++R V  E
Sbjct: 245 FEINKNFRNEGISTWHNP-EFTMLEFYWAFATYKDLMEITEHMIRFVANE 293



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VM+L    ++R+V LFP+
Sbjct: 453 RALEYGMPPTAGEGVGIDRLVMILTNKDSIRDVLLFPL 490


>gi|42783731|ref|NP_980978.1| asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|59798564|sp|Q72ZI3|SYN_BACC1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|42739661|gb|AAS43586.1| asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 463

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 129/327 (39%), Gaps = 61/327 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V   
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             ++++  A+           E+ A+KI+I  +++    P+  +R   E +R       L
Sbjct: 77  GKVIVTPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T   +   R R I +       +   F+   TPI+T S  EGA +     RV     
Sbjct: 125 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 181

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             +P+                       Q      A  F   +   P FR E+  + R  
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270
            EF+ ++ E++F E  D++N  E++L+   +          EF N            N +
Sbjct: 242 AEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVI 301

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F RI Y +AI+       D + P+
Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328


>gi|257466811|ref|ZP_05631122.1| asparaginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 463

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 127/308 (41%), Gaps = 59/308 (19%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD---HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGL 76
           V+L  WV ++R      FL+I D    YGI QVV +     F EI++   +  V+    L
Sbjct: 21  VKLGAWVRKIRSQKNFGFLEINDGSFFYGI-QVVFDTSLENFDEISRLSIASSVIVEGTL 79

Query: 77  VMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           V S  A         GQ  E+ A K+E+   A+ L  P+  +R   E +R K   L  R 
Sbjct: 80  VKSEGA---------GQEFEIKASKVEVCQKAD-LDYPLQNKRHSFEFLRTKSH-LRART 128

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRV 186
           +T       R+    ++      +NF+   TPI+T+S  EGA +           VP   
Sbjct: 129 NTFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITSSDAEGAGEMFRITTLDLNNVPKNE 188

Query: 187 N-----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +     Q  F+          QL      + F   +   P FR E   + R   EF+ ++
Sbjct: 189 DGSINFQKDFFGKSTNLTVSGQLNGETYCAAFRNIYTFGPTFRAEYSNTARHASEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVL-----------------------RGVFEEFSNGNTVSNNFL 275
            EM+F + +  ++  E ++                       +G+F++ +  N ++N+F 
Sbjct: 249 PEMAFADLEVNMDIAEKMVKYIIRYVMETCPEEMNFFNQFIEKGLFDKLN--NVLNNDFG 306

Query: 276 RICYDDAI 283
           R+ Y +AI
Sbjct: 307 RLTYTEAI 314



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 4/78 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E++    + +G+ KE     +       + G  PH G   G +R++M 
Sbjct: 386 EIIGGSQREDNLEILETRMNELGMDKE----DYSFYLDLRKYGSFPHSGYGLGFERMIMY 441

Query: 550 LLGAKNVREVSLFPMSQN 567
           L G  N+R+V  FP + N
Sbjct: 442 LTGMANIRDVIPFPRTPN 459


>gi|228999332|ref|ZP_04158912.1| Asparaginyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229006887|ref|ZP_04164519.1| Asparaginyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228754380|gb|EEM03793.1| Asparaginyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228760529|gb|EEM09495.1| Asparaginyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 463

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 128/323 (39%), Gaps = 61/323 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V     LV
Sbjct: 21  VQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVEGKLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A+KI+I  +++    P+  +R   E +R       LR  T
Sbjct: 81  ATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHLRPRT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              +   R R I +       +   F+   TPI+T S  EGA +     RV       LP
Sbjct: 129 NAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDMNNLP 185

Query: 196 QAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           +                       Q      A  F   +   P FR E+  + R   EF+
Sbjct: 186 KGEDGKVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFW 245

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNF 274
            ++ E++F E +D+++  E++L+   +          EF N            N ++++F
Sbjct: 246 MVEPEIAFAELEDVMDLTEDMLKYAMKHVLEHAPEEMEFFNSFVDKTVLERMNNVINSDF 305

Query: 275 LRICYDDAIRRYGTDKPDLRNPI 297
            RI Y +AI+       D + P+
Sbjct: 306 GRITYTEAIKVLQESGADFKYPV 328


>gi|75075861|sp|Q4R4Z1|SYNC_MACFA RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|67970984|dbj|BAE01834.1| unnamed protein product [Macaca fascicularis]
          Length = 558

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 115/289 (39%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V             +  E   C +G+
Sbjct: 135 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCV-------------LADELCQCYNGV 181

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           ++S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 182 LLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 241

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ I    R       + E + P L  +  EG       +   
Sbjct: 242 NRHMMIRGENMSKILKARSMITRCFRDHFFDRGYHEITPPSLVQTQVEGGATLFKLNYFG 301

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E   +  D
Sbjct: 302 EEAF--LTQSSQLYLETCLPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPLLTFD 358

Query: 248 DILNTMEN--------VLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283
           D+LN +E+        +L+      V+E   N       F R+ Y DAI
Sbjct: 359 DLLNRLEDLVCDVVDRILKSPAGSIVYELNPNFQPPKRPFKRMNYSDAI 407


>gi|77408513|ref|ZP_00785250.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77172870|gb|EAO76002.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 448

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---------NPDSAC--FEIAKSV 65
           VG  V +  WV      G I F+ +RD     Q VA           +S    F++ K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKFG-------YELDITDLEVIGESHEYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II S         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGKPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYIAEPFKRVSYDDAI 295



 Score = 40.4 bits (93), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ K   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDNYDALVAKMDELGMDKS--EYDFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|241759648|ref|ZP_04757749.1| lysine--tRNA ligase [Neisseria flavescens SK114]
 gi|241320020|gb|EER56401.1| lysine--tRNA ligase [Neisseria flavescens SK114]
          Length = 503

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 131/292 (44%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           GD+G  ++      V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GDIGKEELDPQAVPVKIAGRMMLKRQMGKASFATIQDVTGQIQLYLNNKGVSQEVLDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGTEGTLFKTN--HGELTVRVSNIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNEHYLEVETPMM-HPIPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    +S N         F R+    AI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASRAVNGTAKISYNGKEVDLESPFERLTILGAIKKY 335



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|325694754|gb|EGD36660.1| asparagine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 448

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAI 295



 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++   +++G+  +  E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNDLGM--DTTEYEFYLDLRKY--GTVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|258624705|ref|ZP_05719639.1| lysyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258582992|gb|EEW07807.1| lysyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 512

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 16/207 (7%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150
           G + ++ ++ ++L+ A   PLP        + +R++ R++DL  +   +N  + R+++++
Sbjct: 135 GDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMS 193

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 194 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 251

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V  E     
Sbjct: 252 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGST 310

Query: 269 TV---------SNNFLRICYDDAIRRY 286
           ++            ++R+   DAI+ Y
Sbjct: 311 SMPYGEHTVEFGGKYVRMSMFDAIKHY 337



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 471 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 506


>gi|254424532|ref|ZP_05038250.1| asparaginyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196192021|gb|EDX86985.1| asparaginyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 468

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 121/308 (39%), Gaps = 51/308 (16%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA-KSVRSEWVLCID 74
           G  + + GWV   R      F+++ D   +   QV+A  D   +E   + + +   + I 
Sbjct: 17  GESLTIQGWVRTKRSAKKFTFIEVNDGSSMNGLQVIAPEDIPDYEKQIERISTGASVQIT 76

Query: 75  GLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           G +     +        GQ +EL A +IE+   ++    P+  +R   E +R     L  
Sbjct: 77  GTLAESPGK--------GQRVELQASEIEVFGESDGETYPLQKKRHSFEFLR-TIGHLRS 127

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS--- 190
           R +TL      R     ++       +F+   TPILTAS  EGA +    +R N  S   
Sbjct: 128 RTNTLGAVFRVRNACATAIHEFFWKRDFLWMHTPILTASDCEGAGEMFTVTRFNLDSIPK 187

Query: 191 -----------FYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+  P       Q +  +M+  F   +   P FR E+  + R   EF+ 
Sbjct: 188 TESGKADYGQDFFGRPAYLTVSGQLEAEIMSMAFSNVYTFGPTFRAENSNTARHLAEFWM 247

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFL 275
           ++ EM+F + +  ++  E  L+ VF            F N            N + N+F 
Sbjct: 248 VEPEMAFCDLEGNMDLAEAFLKYVFSYVMEHCADDMAFFNQRIDKTVLETAENIIDNDFE 307

Query: 276 RICYDDAI 283
           RI Y DAI
Sbjct: 308 RITYTDAI 315


>gi|110639549|ref|YP_679759.1| asparaginyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|122966545|sp|Q11Q97|SYN_CYTH3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|110282230|gb|ABG60416.1| asparagine--tRNA ligase [Cytophaga hutchinsonii ATCC 33406]
          Length = 464

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 126/308 (40%), Gaps = 39/308 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSEWVLCIDGLVM 78
           V L GWV   R +  + F+ + D   I  +    D A F  E  K V +   + I G V+
Sbjct: 21  VVLKGWVRTKRGNKHVAFVALNDGSTIHTIQIVLDVAKFNEEQLKDVTTGACISISGKVV 80

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +            GQ IE+    +E++ VA+    P+   ++   S+ F      LR  T
Sbjct: 81  TSQG--------AGQSIEVQGDTLEVIGVADPETYPL---QKKGHSLEFLREIAHLRPRT 129

Query: 138 LHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVPSRVN 187
              + V R R  +  ++      + F+   TPI+T S  EGA         D   PS+  
Sbjct: 130 NTFSCVLRLRHAMAFAVHSFFNEKGFVYVHTPIITGSDAEGAGAMFQVTTLDLKNPSKTK 189

Query: 188 QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +G       F+          QL   L A      +   P FR E+  + R   EF+ ++
Sbjct: 190 EGEVDFTKDFFGKATNLTVSGQLEGELAAMALGEVYTFGPTFRAENSNTTRHLAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYD-DAIRRYGTDKPDLRNP 296
            EM+F E  D ++  E  L+ +  +++  N + + NFL   YD + I R    K  +  P
Sbjct: 250 PEMAFYEIQDNMDLAEEFLKYLV-KYALDNCIDDLNFLNEMYDKELIERL---KSVVETP 305

Query: 297 IIMHNVTE 304
            +  N TE
Sbjct: 306 FVRLNYTE 313


>gi|325687642|gb|EGD29663.1| asparagine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 448

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAI 295



 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++   +++G+  +  E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNDLGM--DTTEYEFYLDLRKY--GTVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|260599229|ref|YP_003211800.1| lysyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260218406|emb|CBA33489.1| Lysyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 505

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 23/285 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++    
Sbjct: 70  VAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGARG 126

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKN 141
           +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL   D   K 
Sbjct: 127 KLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLIANDESRKT 183

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQ 199
              R++I+  +R  M+   F+E  TP++    P GA  R F+          Y L  AP+
Sbjct: 184 FKARSQILAGIRQFMVGRGFMEVETPMMQVI-PGGASARPFVTHHNALDLDMY-LRIAPE 241

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R 
Sbjct: 242 LYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFRT 300

Query: 260 VFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDL 293
           + +E      V            F ++   +AI++Y   TD  DL
Sbjct: 301 LAQEVLGTTQVPYGEETFDFGKPFEKLTMREAIKKYRPETDMADL 345



 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F +   +K+  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|254413364|ref|ZP_05027135.1| asparaginyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196179984|gb|EDX74977.1| asparaginyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 463

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 123/311 (39%), Gaps = 63/311 (20%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA-KSVRSEWVLCIDGLV 77
           V + GWV   R      F+++ D   +   QV+ NPD   ++   + V +   + + G++
Sbjct: 19  VTIQGWVRTKRELKEFAFMEVNDGSCLANLQVILNPDVPDYQTTLQRVNTGASVEVAGVL 78

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +    +        GQ IEL A  +++   A+    P+  +R   E +R     L  R +
Sbjct: 79  VPSPGK--------GQRIELRANSVQVYGEADPATYPLQKKRHSFEFLR-TIGHLRSRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T+   +  R    N++        F+   +PI+TAS  EGA +    + +N      L +
Sbjct: 130 TIGAVLRVRNACANAIHQFFQERGFLWIHSPIITASDCEGAGELFTVTNLN------LNE 183

Query: 197 APQQYKQLL-----------------------MASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            P+   QL+                       MA  F   +   P FR E+  + R   E
Sbjct: 184 IPKTEDQLVDFSQDFFGRQAYLTVSGQLQAEVMAMTFGNVYTFGPTFRAENSNTSRHLAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSN 272
           F+ ++ EM+F +    ++  E  L+ VF           EF N            N ++N
Sbjct: 244 FWMVEPEMAFCDLQGDMDLAEEFLKYVFSSVLENCPEDMEFFNKRIDNSVLATADNIINN 303

Query: 273 NFLRICYDDAI 283
            F RI Y DAI
Sbjct: 304 QFERITYTDAI 314


>gi|194099248|ref|YP_002002342.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|238690219|sp|B4RP57|SYK_NEIG2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|193934538|gb|ACF30362.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
          Length = 503

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 126/278 (45%), Gaps = 22/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  I+D  G  Q+  N      E+     + W L   G ++  
Sbjct: 68  VKIAGRMMLKRQMGKASFATIQDVTGQIQLYLNNKGVSQEVLDGF-NHWDL---GDIVGA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N   G++ +    I +LS +   PLP   +    +  +++ R++DL  +   +
Sbjct: 124 EGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKYRQRYVDLIANEESR 180

Query: 141 NI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQA 197
           N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+          Y L  A
Sbjct: 181 NTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTHHNALDIPLY-LRIA 238

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F + + ++   E+++
Sbjct: 239 PELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAFSDYERMMQMAEDII 297

Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           R      +    ++ N         F R+   +AI++Y
Sbjct: 298 RNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  E   + F +    K+  ++    +   Y RA + G+PP 
Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL   + +R+V LFP
Sbjct: 472 GGCGIGIDRLVMLLTDLQTIRDVILFP 498


>gi|170064641|ref|XP_001867610.1| lysyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167881959|gb|EDS45342.1| lysyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 585

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 118/252 (46%), Gaps = 22/252 (8%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  + ++G +H +R  GG +IF D+R      QV+AN        AK   SE     D  
Sbjct: 112 GESLSVAGRIHAIRESGGKLIFYDLRGEGVKLQVMAN--------AKLYESEATFGEDTA 163

Query: 77  VMSRSAET----INANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFL 131
            + R               G++ +  +K+++LS     LP   +G ++  +  RF+ R+L
Sbjct: 164 RLRRGDIVGIVGYPGKTKKGELSVIPKKLKLLSPCLHMLPHLHYGLKD--KETRFRQRYL 221

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQ 188
           DL  +   ++I   R +II+ +R  +    F+E  TP++   +    A+ F+   + +N 
Sbjct: 222 DLILNNHVRDIFYVRAKIISYVRQFLDGMGFLEVETPMMNMIAGGATAKPFITHHNDLNM 281

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             F  +  AP+ Y ++L   G DR ++I   FR+E       P EF   +  M++ + +D
Sbjct: 282 NLFLRI--APELYLKMLTVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYND 338

Query: 249 ILNTMENVLRGV 260
           ++   E ++ G+
Sbjct: 339 LIEMTEKMVSGM 350



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L    N++EV LFP
Sbjct: 525 ALEYGLPPTGGWGMGIDRLTMFLTDNNNIKEVLLFP 560


>gi|313247646|emb|CBY15807.1| unnamed protein product [Oikopleura dioica]
          Length = 594

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVAN----PDSACF-EIAKSVRSEWVLCID 74
           V  +G +H  R  G  ++F D+R      Q++AN     D   F +I   +R   ++ + 
Sbjct: 132 VSTAGRIHSFRASGAKLVFYDLRSEGEKIQIMANLGQYKDPEEFAKIISEIRRGDIVGVK 191

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G                G++ +   ++++LS    + LP   +    +  R++ R LDL 
Sbjct: 192 GFP---------GKTKKGELSIMPTEMQVLSPCLHM-LPKLHDGLKDKETRYRKRHLDLI 241

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV-PSRVNQGS 190
              D  HK  + R +II  +R  +    F+E  TP++   +    A+ F    + ++   
Sbjct: 242 MNADVRHK-FIARAQIIQYLRTYLANNGFLEVETPMMNMIAGGATAKPFKTFHNDLSMDL 300

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  +  AP+ Y ++L+  G+DR F+I   FR+E       P EF   +  M++ + DD++
Sbjct: 301 FMRV--APELYLKMLVVGGYDRVFEIGKNFRNEGIDMTHNP-EFTACEFYMAYADADDLM 357

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E +L G+ +  +    V 
Sbjct: 358 KITEELLSGMVKAITGDYKVK 378



 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + G+PP GG   G+DR+ M L  + N++EV LFP
Sbjct: 541 QALEYGLPPTGGWGLGVDRLTMFLTDSNNIKEVILFP 577


>gi|194759334|ref|XP_001961904.1| GF15206 [Drosophila ananassae]
 gi|190615601|gb|EDV31125.1| GF15206 [Drosophila ananassae]
          Length = 558

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 106/246 (43%), Gaps = 8/246 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G ++ GS V++ GWVHR+R  G  +IF+ +RD  G  Q V N        A ++ +E  +
Sbjct: 130 GTANRGSRVKIYGWVHRLRRQGKSLIFITLRDGTGFLQCVLNDQLCQTYDALTLSTESTV 189

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  EL+    E++ +A           E    ++   R +
Sbjct: 190 VLFGTLKL----VPEGKTAPGGHELNVDYWELIGLAPPGGADAILNEEAQPDVQLDNRHI 245

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R+ +  + R       + E + P L  +  EG           + ++
Sbjct: 246 MIRGENTSKVLKMRSVVAQAFRAHYEERGYNEVTPPTLVQTQVEGGSTLFKLKYFGEEAY 305

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  + +  D  F I+  +R E  R+ R   E+  ++ E  F+  +++L+
Sbjct: 306 --LTQSSQLYLETCLPALGD-VFTISQSYRAEQSRTRRHLAEYSHVEAECPFITFEELLD 362

Query: 252 TMENVL 257
            +E+++
Sbjct: 363 RLEDLV 368



 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 12/90 (13%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGI 539
           L+ N  EI  G +R H SE +L+ +   GI  +      + R  G          PHGG 
Sbjct: 475 LLPNVGEIVGGSMRIHDSEELLKGYEREGIDPKPYYWYTDQRIYGTM--------PHGGY 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G++R +  LL   ++REV L+P   + C
Sbjct: 527 GLGLERFLCWLLNRYHIREVCLYPRYLDRC 556


>gi|206977721|ref|ZP_03238612.1| asparaginyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|222098023|ref|YP_002532080.1| asparaginyl-tRNA synthetase [Bacillus cereus Q1]
 gi|229198708|ref|ZP_04325407.1| Asparaginyl-tRNA synthetase [Bacillus cereus m1293]
 gi|206744022|gb|EDZ55438.1| asparaginyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|221242081|gb|ACM14791.1| asparaginyl-tRNA synthetase [Bacillus cereus Q1]
 gi|228584784|gb|EEK42903.1| Asparaginyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 463

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 129/327 (39%), Gaps = 61/327 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V   
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             ++++  A+           E+ A+KI+I  +++    P+  +R   E +R       L
Sbjct: 77  GKVIVTPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T   +   R R I +       +   F+   TPI+T S  EGA +     RV     
Sbjct: 125 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 181

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             +P+                       Q      A  F   +   P FR E+  + R  
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270
            EF+ ++ E++F E  D++N  E++L+   +          EF N            N +
Sbjct: 242 AEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVI 301

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F RI Y +AI+       D + P+
Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328


>gi|77405446|ref|ZP_00782539.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77175939|gb|EAO78715.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 448

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---------NPDSAC--FEIAKSV 65
           VG  V +  WV      G I F+ +RD     Q VA           +S    F++ K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGIEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKFG-------YELDITDLEVIGESHEYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II S         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGKPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYIAEPFKRVSYDDAI 295



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ K   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDDYDALVAKMDELGMDKS--EYDFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|283955824|ref|ZP_06373315.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792779|gb|EFC31557.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 501

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 128/281 (45%), Gaps = 17/281 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +  +R  G  IF +I D     Q+  + DS   E+   ++    L +  +V+ +  
Sbjct: 60  VAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYAILKKN--LEVGDIVLVKGF 117

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKN 141
             +     TG+  L A ++++ + A  +PLP           R++ R++D+  +  + K+
Sbjct: 118 PFVTK---TGEFSLHASEVKLATKAI-VPLPEKYHGLTDIEQRYRKRYVDMIMNAEVRKD 173

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
            + R+++++ +R     + F+E  TP++   +        V    + G    L  AP+ Y
Sbjct: 174 FLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPELY 233

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+  GF+  F+I  CFR+E       P EF  ++   ++    D+++  E +   + 
Sbjct: 234 LKRLVVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTEELFALLL 292

Query: 262 EEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293
           ++ + G T+         S  F RI Y DA+ +YG    DL
Sbjct: 293 DKLNLGKTIEFDGKMIDFSKPFERITYKDALCKYGGLDRDL 333



 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL   K++R+V LFP
Sbjct: 453 ALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFP 488


>gi|251782082|ref|YP_002996384.1| asparaginyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390711|dbj|BAH81170.1| asparaginyl-tRNA synthetase AsnS [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323126943|gb|ADX24240.1| asparaginyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 448

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 114/295 (38%), Gaps = 42/295 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+          +  F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQAVAFKPNFIERFGEEEGADKFDTIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 75  SQETSVFVKGIVKEDERSKFG-------YELDVTDIEVIGESQDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E   +      
Sbjct: 125 MDNRHLWLRSRRQAAIMQIRNAIIYASYEFFDQNGFIKFDSPILSGNAAENTTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
               +F  L Q+ Q Y +  +MA G  R F   P FR E  ++ R   EF+ +D E  F+
Sbjct: 185 FGNPAF--LSQSGQLYLEAGMMALG--RVFDFGPVFRAEKSKTRRHLTEFWMMDAEYPFL 240

Query: 245 EQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
             ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 241 SHEESLDLQEAYVKAMIQGVLDRAPQALETLERDTDLLKKYIAEPFKRVAYDDAI 295


>gi|229546902|ref|ZP_04435627.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|255971768|ref|ZP_05422354.1| lysyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256855222|ref|ZP_05560583.1| lysyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|257088707|ref|ZP_05583068.1| lysyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|307290186|ref|ZP_07570104.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|312904623|ref|ZP_07763778.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|312952668|ref|ZP_07771532.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|229307830|gb|EEN73817.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|255962786|gb|EET95262.1| lysyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256709735|gb|EEU24782.1| lysyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256997519|gb|EEU84039.1| lysyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|306498742|gb|EFM68241.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|310629456|gb|EFQ12739.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310631975|gb|EFQ15258.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315028813|gb|EFT40745.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315153548|gb|EFT97564.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315156272|gb|EFU00289.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315158583|gb|EFU02600.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315160788|gb|EFU04805.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315579387|gb|EFU91578.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|323479481|gb|ADX78920.1| lysyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 498

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 21/267 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CF 59
           +Y  H+  +L  S++ + V ++G +   R  G   F  ++D  G  Q+    D      +
Sbjct: 50  QYDNHTKEEL--SEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAY 107

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+ K         + G +M  +         TG++ + AQ I +L+ A   PLP      
Sbjct: 108 ELFKHADLGDFFGVTGQIMKTN---------TGEVTVKAQTITLLTKALR-PLPDKYHGL 157

Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                R++ R+LDL   +++  +  +KR++II+ +R  +    ++E  TP+L   +    
Sbjct: 158 TNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAA 216

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P EF  
Sbjct: 217 ARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 274

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263
           L+   ++ +  D+++  E ++R   E+
Sbjct: 275 LEAYTAYTDYQDVMDLTEGIIRNAAEK 301



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL  A+++R+V LFP
Sbjct: 460 ALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 495


>gi|228993282|ref|ZP_04153198.1| Asparaginyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228766350|gb|EEM14993.1| Asparaginyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 463

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 128/323 (39%), Gaps = 61/323 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V     LV
Sbjct: 21  VQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVEGKLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A+KI+I  +++    P+  +R   E +R       LR  T
Sbjct: 81  ATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHLRPRT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              +   R R I +       +   F+   TPI+T S  EGA +     RV       LP
Sbjct: 129 NAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDMNNLP 185

Query: 196 QAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           +                       Q      A  F   +   P FR E+  + R   EF+
Sbjct: 186 KGEDGKVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFW 245

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNF 274
            ++ E++F E +D+++  E++L+   +          EF N            N ++++F
Sbjct: 246 MVEPEIAFAELEDVMDLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDF 305

Query: 275 LRICYDDAIRRYGTDKPDLRNPI 297
            RI Y +AI+       D + P+
Sbjct: 306 GRITYTEAIKVLQESGADFKYPV 328


>gi|312866744|ref|ZP_07726958.1| asparagine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097825|gb|EFQ56055.1| asparagine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 448

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 75  SQETSVFVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDEAI 295



 Score = 40.4 bits (93), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++    ++G+ +   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMESLGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 420 IERMVTFAAGTKHIREAIPFP 440


>gi|258540705|ref|YP_003175204.1| lysyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|257152381|emb|CAR91353.1| Lysyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 498

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 119/275 (43%), Gaps = 32/275 (11%)

Query: 2   HRY-RTHSCG----DLGVSDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTHS      + G  D  +       V ++G +   R  G + F DIRD  G  Q+
Sbjct: 35  HRFDRTHSAAKVREEFGEDDKETLLEEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 94

Query: 51  VANPDSACFE---IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
               D    E   I K      +L I G VM            T   EL+ +   +  +A
Sbjct: 95  YVRKDVVGDENYMIFKKADLGDILGISGEVMK-----------TDSGELTVKANHVTHLA 143

Query: 108 EEL-PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           + L PLP           +++ R+LDL    D+  +  VKRT+I++++R  +    F+E 
Sbjct: 144 KALRPLPDKWHGLTDVEQKYRKRYLDLISNPDSFDR-FVKRTKIVSAVREYLDNHGFLEV 202

Query: 165 STPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP+L   +    AR F+          Y L  A + + + L+  G +R ++I   FR+E
Sbjct: 203 ETPVLHNQAGGANARPFITHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNE 261

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
              +   P EF +L+   ++ +  D++   E + R
Sbjct: 262 GIDTKHNP-EFTELETYAAYWDLSDVMVETEGIFR 295



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 459 ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 494


>gi|307152637|ref|YP_003888021.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306982865|gb|ADN14746.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 463

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 123/305 (40%), Gaps = 51/305 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLV 77
           V + GWV   R   G  F+++ D   +   QVV +P    ++ + + + +   + + G +
Sbjct: 19  VTIGGWVRTKRELKGFAFMEVNDGSSMANLQVVLDPQVPSYDSLLQQINTGASVVVTGTL 78

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +    +        GQ IEL A  + +   A+    P+  +R   E +R     L  R +
Sbjct: 79  VPSPGK--------GQRIELKATSVTLYGEADPETYPLQKKRHSFEFLR-TIAHLRGRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVN 187
           TL   +  R    N++        F+   TPI+TA+  EGA +           +P    
Sbjct: 130 TLGAVMRVRNACANAIHRFFQERGFLWVHTPIITANDCEGAGELFTVTNLDLKKLPRNEQ 189

Query: 188 QG-----SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           QG      F+   A      Q +  +MA  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 190 QGIDFSQDFFGKRAYLTVSGQLEAEIMALAFQNVYTFGPTFRAENSNTSRHLAEFWMVEP 249

Query: 240 EMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLRIC 278
           EM+F + D   +  E  L+ +F+          EF N            N ++N F RI 
Sbjct: 250 EMAFCDLDGDQDLAEAFLKYIFKSVLDSCLEDMEFFNQRIDNTVLETAENIINNEFGRIT 309

Query: 279 YDDAI 283
           Y +AI
Sbjct: 310 YTEAI 314


>gi|218439606|ref|YP_002377935.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218172334|gb|ACK71067.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 463

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 126/308 (40%), Gaps = 57/308 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLV 77
           V ++GWV   R   G  F+++ D   +   QVV +P    ++ + +++ +   + + G +
Sbjct: 19  VTIAGWVRTKRELKGFAFMEVNDGSCMANLQVVLDPQVPDYDTLVQTINTGASVVVKGNL 78

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +    +        GQ IEL A  + +   A+    P+  +R   E +R     L  R +
Sbjct: 79  VPSPGK--------GQRIELKATTVTLYGEADPQTYPLQKKRHSFEFLR-TIAHLRSRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           TL   +  R    N++        F+   TPI+TAS  EGA +    + ++   F  LP+
Sbjct: 130 TLGAVMRVRNACANAIHRFFQERGFLWVHTPIITASDCEGAGELFTVTSLD---FNKLPR 186

Query: 197 APQQ--------------------YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             QQ                     +  +MA  F   +   P FR E+  + R   EF+ 
Sbjct: 187 NKQQEIDFSQDFFGKRAYLTVSGQLEAEIMALAFQNVYTFGPTFRAENSNTSRHLAEFWM 246

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFL 275
           ++ EM+F + +   +  E  L+ +F+          EF N            N ++N F 
Sbjct: 247 VEPEMAFCDLNGDQDLAEAFLKYIFKFVLDHCQEDMEFFNQRIDNTVLETAENIINNEFG 306

Query: 276 RICYDDAI 283
           RI Y +AI
Sbjct: 307 RITYTEAI 314


>gi|57237456|ref|YP_178469.1| lysyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|81354013|sp|Q5HW66|SYK_CAMJR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|57166260|gb|AAW35039.1| lysyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315057824|gb|ADT72153.1| Lysyl-tRNA synthetase (class II) [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 501

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 128/281 (45%), Gaps = 17/281 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +  +R  G  IF +I D     Q+  + DS   E+   ++    L +  +V+ +  
Sbjct: 60  VAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKN--LEVGDIVLVKGF 117

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKN 141
             +     TG+  L A ++++ + A  +PLP           R++ R++D+  +  + K+
Sbjct: 118 PFVTK---TGEFSLHASEVKLATKAI-VPLPEKYHGLTDIEQRYRKRYVDMIMNAEVRKD 173

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
            + R+++++ +R     + F+E  TP++   +        V    + G    L  AP+ Y
Sbjct: 174 FLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPELY 233

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+  GF+  F+I  CFR+E       P EF  ++   ++    D+++  E +   + 
Sbjct: 234 LKRLVVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTEELFALLL 292

Query: 262 EEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293
           ++ + G T+         S  F RI Y DA+ +YG    DL
Sbjct: 293 DKLNLGKTIEFDGKMIDFSKPFERITYKDALCKYGGLDRDL 333



 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL   K++R+V LFP
Sbjct: 453 ALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFP 488


>gi|322375594|ref|ZP_08050106.1| asparagine--tRNA ligase [Streptococcus sp. C300]
 gi|321279302|gb|EFX56343.1| asparagine--tRNA ligase [Streptococcus sp. C300]
          Length = 447

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 112/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             FE  K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFETIKHL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R++    G K++RE   FP
Sbjct: 419 IERMITFAAGTKHIREAIPFP 439


>gi|193666902|ref|XP_001951757.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like
           [Acyrthosiphon pisum]
          Length = 560

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 10/241 (4%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           S +++ GWVHR+R  G  ++F+ +RD  G  Q V N        A  + +E  + + G V
Sbjct: 138 SRIKMYGWVHRLRRQGKSLMFITLRDGTGFIQTVLNEKLCQTYNALMLSTESSVLLFG-V 196

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFGEREYPESIRFKYRFLDLRRD 136
           + +  E  +A    G  EL     E++++A       +  E   PE +    R + +R +
Sbjct: 197 LKQVPEGKSA---PGGHELQVDYWELITLAPPGGADSILNEDANPE-VLLDNRHIAIRGE 252

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
              K ++ R+ +  + R   + +  IE   P L  +  EG           Q ++  L Q
Sbjct: 253 NTSKILLMRSVVTQAFRMHNLDKGCIEVVPPTLVQTQVEGGSTLFKLDYFGQEAY--LTQ 310

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  + +  D  F +A  +R E  R+ R   E+  ++ E +F+  DD+L+ +E++
Sbjct: 311 SSQLYLETCLPALGD-VFCMAQSYRAEQSRTRRHLSEYTHVEAEFAFITFDDLLDRIEDM 369

Query: 257 L 257
           +
Sbjct: 370 I 370



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 14/85 (16%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKE-----VVENRFGGLYRAFQCGMPPHGGIAAGID 544
           EI  G +R    E +L  +  VGI  +       + +FG           PHGG   G++
Sbjct: 483 EIVGGSMRIWDEEELLAGYKKVGIDPKPYYWYTDQRKFGSC---------PHGGYGLGLE 533

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFC 569
           R +  LL   ++REV L+P   + C
Sbjct: 534 RFLCWLLNRYHIREVCLYPRFLDRC 558


>gi|327463305|gb|EGF09626.1| asparagine--tRNA ligase [Streptococcus sanguinis SK1]
          Length = 448

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAI 295



 Score = 41.6 bits (96), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++   +++G+  +  E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNDLGM--DTTEYEFYLDLRKY--GTVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|306829853|ref|ZP_07463040.1| asparagine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304427864|gb|EFM30957.1| asparagine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 447

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMEELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|253580947|ref|ZP_04858209.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847789|gb|EES75757.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 678

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 132/284 (46%), Gaps = 32/284 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +I+D  G  QV    D+   +     +   +  I GL    
Sbjct: 96  VAIAGRMMFKRVMGKASFCNIQDLQGNIQVYVARDAIGADSYADFKKSDIGDIFGL---- 151

Query: 81  SAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
             E       TG+I + A+ + +LS + + LP    G  +    +R++ R++DL  +   
Sbjct: 152 --EGFAFRTRTGEISIHAESMTLLSKSLQILPEKFHGLTDT--DMRYRQRYVDLIMNQDS 207

Query: 140 KNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ-- 196
           KN+ +KR++I+  +R  +   +F+E  TP+L A++   A      +R  +  + AL +  
Sbjct: 208 KNVFIKRSQILKEIRNFLADRDFMEVETPMLVANAGGAA------ARPFETHYNALNEDV 261

Query: 197 ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
               + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++  
Sbjct: 262 KLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMEL 320

Query: 253 MENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
            E++ R + E+      +S N         F R+  +DAI++Y 
Sbjct: 321 TESMFRYLAEKVCGSAKISYNGIEIDLSKPFERLTMNDAIKKYA 364



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+VMLL  ++ +R+V LFP
Sbjct: 490 ALEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLFP 525


>gi|59801795|ref|YP_208507.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|239999529|ref|ZP_04719453.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240014706|ref|ZP_04721619.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240017153|ref|ZP_04723693.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
 gi|240081208|ref|ZP_04725751.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240113420|ref|ZP_04727910.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240116233|ref|ZP_04730295.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|240118517|ref|ZP_04732579.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|240121228|ref|ZP_04734190.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
 gi|240124061|ref|ZP_04737017.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|240126319|ref|ZP_04739205.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|240128726|ref|ZP_04741387.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|254494246|ref|ZP_05107417.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|260439953|ref|ZP_05793769.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|268595341|ref|ZP_06129508.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268597319|ref|ZP_06131486.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268599493|ref|ZP_06133660.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268601895|ref|ZP_06136062.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268604225|ref|ZP_06138392.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268682686|ref|ZP_06149548.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268684904|ref|ZP_06151766.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268687112|ref|ZP_06153974.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291043238|ref|ZP_06568961.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|293398557|ref|ZP_06642735.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|75355660|sp|Q5F6U2|SYK_NEIG1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|59718690|gb|AAW90095.1| putative lysyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|226513286|gb|EEH62631.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268548730|gb|EEZ44148.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268551107|gb|EEZ46126.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268583624|gb|EEZ48300.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268586026|gb|EEZ50702.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268588356|gb|EEZ53032.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268622970|gb|EEZ55370.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268625188|gb|EEZ57588.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268627396|gb|EEZ59796.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291012844|gb|EFE04827.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291611028|gb|EFF40125.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|317164775|gb|ADV08316.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 503

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 126/278 (45%), Gaps = 22/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  I+D  G  Q+  N      E+     + W L   G ++  
Sbjct: 68  VKIAGRMMLKRQMGKASFATIQDVTGQIQLYLNNKGVSQEVLDDF-NHWDL---GDIVGA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N   G++ +    I +LS +   PLP   +    +  +++ R++DL  +   +
Sbjct: 124 EGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKYRQRYVDLIANEESR 180

Query: 141 NI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQA 197
           N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+          Y L  A
Sbjct: 181 NTFIKRSQIIQSVRNFMVGEHYLEVETPMM-HPIPGGATAKPFVTHHNALDIPLY-LRIA 238

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F + + ++   E+++
Sbjct: 239 PELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAFSDYERMMQMAEDII 297

Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           R      +    ++ N         F R+   +AI++Y
Sbjct: 298 RNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  E   + F +    K+  ++    +   Y RA + G+PP 
Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL   + +R+V LFP
Sbjct: 472 GGCGIGIDRLVMLLTDLQTIRDVILFP 498


>gi|22536704|ref|NP_687555.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|25010641|ref|NP_735036.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76787521|ref|YP_329308.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|76799395|ref|ZP_00781548.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77413700|ref|ZP_00789883.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|54039684|sp|P67574|SYN_STRA5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|54042045|sp|P67573|SYN_STRA3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123602188|sp|Q3K2E5|SYN_STRA1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|22533546|gb|AAM99427.1|AE014216_3 asparaginyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|23094995|emb|CAD46216.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76562578|gb|ABA45162.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|76585247|gb|EAO61852.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77160245|gb|EAO71373.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 448

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---------NPDSAC--FEIAKSV 65
           VG  V +  WV      G I F+ +RD     Q VA           +S    F++ K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKFG-------YELDITDLEVIGESHEYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II S         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGKPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYIAEPFKRVSYDDAI 295



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ K   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDDYDALVAKMDELGMDKS--EYDFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|90580578|ref|ZP_01236383.1| lysyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438236|gb|EAS63422.1| lysyl-tRNA synthetase [Photobacterium angustum S14]
          Length = 501

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 132/271 (48%), Gaps = 27/271 (9%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWV-LCIDGLVMSRSAETINANIITGQIEL 96
           FL I+D  G  Q  A+ D     + K ++ ++  L I  ++  + A   +     G + +
Sbjct: 76  FLAIQDVSGRIQAYASKD-----VQKELKEKYSGLDIGDIIGIKGALHKSGK---GDLYV 127

Query: 97  SAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRC 154
           +  + E+L+ A   PLP        + +R++ R++DL    D+ H  +V R+++++++R 
Sbjct: 128 NMDEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNDDSRHAFVV-RSKVVSAIRS 185

Query: 155 RMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
            M+ + F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  GF+R
Sbjct: 186 FMVTKGFMEVETPMMHVI-PGGATARPFITHHNALDIDMY-LRVAPELYLKRLVVGGFER 243

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV-- 270
            F+I   FR+E   S R   EF  ++  M++ + +D+++  E +L  +  +    + +  
Sbjct: 244 VFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSSIAIDVLGSSKMPY 302

Query: 271 -------SNNFLRICYDDAIRRYGTDKPDLR 294
                  +  + R+   DAI++Y  +  +++
Sbjct: 303 GEFEVEFAGPYTRMSMLDAIKQYNPEHAEIQ 333



 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|327470825|gb|EGF16281.1| asparagine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 448

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAI 295



 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++   +++G+  +  E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNDLGM--DTTEYEFYLDLRKY--GTVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|218262591|ref|ZP_03476996.1| hypothetical protein PRABACTJOHN_02675 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223300|gb|EEC95950.1| hypothetical protein PRABACTJOHN_02675 [Parabacteroides johnsonii
           DSM 18315]
          Length = 373

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 33/288 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLV 77
           V ++G +   R  G   F++++D  G  QV  + D  C E  K + +   + +L I   V
Sbjct: 55  VSIAGRIMSRRIMGKASFMELQDSEGRIQVYISRDDICLEENKDLYNIVFKKLLDIGDFV 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYR 129
                +        G+I + AQ+I +LS + + PLPV   ++         PE +R++ R
Sbjct: 115 ---GIKGFVFRTQMGEISVHAQEITVLSKSLK-PLPVVKYKDGVAYDGFNDPE-LRYRQR 169

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRV 186
           ++DL  +   KNI +KR  +I +MR  +    + E  TPIL  S P G  AR F+     
Sbjct: 170 YVDLVVNDGVKNIFMKRAAVIKTMRTALDEAGYTEVETPIL-QSIPGGASARPFITHHNS 228

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG--------EFYQLD 238
                Y L  A + Y + L+  GF+  ++I   FR+E       P         ++   +
Sbjct: 229 LDIGLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNPEFTCMELYVQYKDYN 287

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIR 284
             MSF EQ  +L  +   + G  E   +G T++    + R+   DAI+
Sbjct: 288 WMMSFTEQ--LLERICIAVNGTHESVVDGKTINFKAPYRRLPILDAIK 333


>gi|312863455|ref|ZP_07723693.1| asparagine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311100991|gb|EFQ59196.1| asparagine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 448

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 112/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  + +  WV      G + FL +RD     Q VA  P+          +  F+  K +
Sbjct: 15  VGEEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKYGEEEGTEKFDTVKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKFG-------YELDVTAVEVIGESHDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR          R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVQQIRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 239 FLSHDESLDLQEAYVKALIQGVIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEAI 295



 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDDYDALVGKMDELGMDRS--EYEFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|297207380|ref|ZP_06923819.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300910339|ref|ZP_07127792.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|296887943|gb|EFH26837.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300888328|gb|EFK83515.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 515

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 130/285 (45%), Gaps = 19/285 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAK 63
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D      F++ K
Sbjct: 67  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 126

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
           +     ++ ++G++   +         TG++ + A+K  +L+ +   LP    G ++  +
Sbjct: 127 NADLGDIVGVEGVMFKTN---------TGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQ 177

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
             R++ R+LDL   +   +  + R++II  MR  +  + F+E  TP++   +    AR F
Sbjct: 178 --RYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPF 235

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +        + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++ 
Sbjct: 236 VTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELY 293

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            ++ +  DI++  E+++R +  E      V  N   I  + A  R
Sbjct: 294 EAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTR 338



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 475 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 510


>gi|239615657|gb|EEQ92644.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
 gi|327353948|gb|EGE82805.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 609

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 124/253 (49%), Gaps = 11/253 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           +R++G ++  R  G  +IF D+R      QV     +   +++   + E +   D + V+
Sbjct: 128 LRIAGRIYTKRAAGAKLIFYDVRAEGVKIQVACQAQNVTGDVSFEHQHEHLRRGDIIGVV 187

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A ++ +L+    ++P   +G R+  +  R++ R+LDL  + 
Sbjct: 188 GFPGRTAPKNRADGELSIFATEVVLLAPCLHQIPSEHYGLRD--QEQRYRQRYLDLIMND 245

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP-SRVNQGSFYAL 194
             +N+ + R+++I  +R      +FIE  TP++ T +    A+ F+   + +N   F  +
Sbjct: 246 KSRNVFITRSKMITYIRRFFDERDFIEVETPMMNTIAGGATAKPFVTHHNDLNMDMFMRI 305

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  DI+N  E
Sbjct: 306 --APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDIMNVTE 362

Query: 255 NVLRGVFEEFSNG 267
            ++ G+ +  + G
Sbjct: 363 ELVSGLVKHITGG 375



 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576


>gi|213852485|ref|ZP_03382017.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 80

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/79 (39%), Positives = 46/79 (58%)

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     
Sbjct: 2   LGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAAC 61

Query: 571 LLMGSPSTVSVEQLRELGL 589
           L+  +PS  +   L EL +
Sbjct: 62  LMTEAPSFANPTALAELSI 80


>gi|121699116|ref|XP_001267916.1| lysyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119396058|gb|EAW06490.1| lysyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 609

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 119/251 (47%), Gaps = 7/251 (2%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           VR++G ++  R  G  + F DIR      QVV    +A  ++    + E +   D + ++
Sbjct: 125 VRIAGRIYTKRSSGSKLFFYDIRAEGVKVQVVCQAQNATGDVPFEAQHEHLRRGDIVGIV 184

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A ++ +L+     +P   +G ++  +  RF+ R+LDL  + 
Sbjct: 185 GFPGRTSPKNRADGELSIFATEVVLLAPCLHAIPSEHYGFQDKEQ--RFRQRYLDLIMNE 242

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
             +N+ V R++I++ +R    + +FIE  TP++ A +        V    +      +  
Sbjct: 243 RSRNVFVTRSKIVSYVRNYFDSRDFIEVETPMMNAIAGGATAKPFVTHHNDLDMNLFMRV 302

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  E +
Sbjct: 303 APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNLTEEL 361

Query: 257 LRGVFEEFSNG 267
           + G+ +  + G
Sbjct: 362 ISGLVKHVTGG 372



 Score = 40.8 bits (94), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 6/71 (8%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST----VSVEQ 583
           + + G+PP GG   GIDR+VM L    +++EV  FP  +   D       T    V VE 
Sbjct: 538 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE--DKTAAETKTAAEVVGVEP 595

Query: 584 LRELGLRIVEN 594
             E G+R + N
Sbjct: 596 KPEEGIRKLSN 606


>gi|15901386|ref|NP_345990.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111658385|ref|ZP_01409072.1| hypothetical protein SpneT_02000464 [Streptococcus pneumoniae
           TIGR4]
 gi|148992568|ref|ZP_01822236.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|148997394|ref|ZP_01824999.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|149007545|ref|ZP_01831180.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|149011780|ref|ZP_01832976.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|149021816|ref|ZP_01835823.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168483580|ref|ZP_02708532.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|168488796|ref|ZP_02712995.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|168575262|ref|ZP_02721225.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|182684498|ref|YP_001836245.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|221232253|ref|YP_002511406.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225854982|ref|YP_002736494.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|225861373|ref|YP_002742882.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|237650224|ref|ZP_04524476.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237820893|ref|ZP_04596738.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|298230725|ref|ZP_06964406.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254954|ref|ZP_06978540.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298503278|ref|YP_003725218.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|303255328|ref|ZP_07341398.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303260169|ref|ZP_07346141.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262559|ref|ZP_07348500.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303264961|ref|ZP_07350876.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303266424|ref|ZP_07352312.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269400|ref|ZP_07355170.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|307068186|ref|YP_003877152.1| aspartyl/asparaginyl-tRNA synthetase [Streptococcus pneumoniae
           AP200]
 gi|20139908|sp|Q97PR0|SYN_STRPN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|14973032|gb|AAK75630.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|147756449|gb|EDK63490.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|147760904|gb|EDK67874.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147764211|gb|EDK71143.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147928585|gb|EDK79599.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|147930052|gb|EDK81039.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|172043153|gb|EDT51199.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|182629832|gb|ACB90780.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|183572685|gb|EDT93213.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|183578759|gb|EDT99287.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|220674714|emb|CAR69287.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225722470|gb|ACO18323.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|225726528|gb|ACO22379.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238873|gb|ADI70004.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|301794551|emb|CBW36995.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae INV104]
 gi|301802260|emb|CBW35012.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302597696|gb|EFL64772.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302636276|gb|EFL66770.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302638666|gb|EFL69129.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302641068|gb|EFL71445.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302644002|gb|EFL74261.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302645480|gb|EFL75712.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|306409723|gb|ADM85150.1| Aspartyl/asparaginyl-tRNA synthetase [Streptococcus pneumoniae
           AP200]
 gi|327389728|gb|EGE88073.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
 gi|332072335|gb|EGI82818.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
 gi|332074297|gb|EGI84774.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
 gi|332199587|gb|EGJ13662.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
 gi|332200104|gb|EGJ14177.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
 gi|332200983|gb|EGJ15054.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 447

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|258509503|ref|YP_003172254.1| Lysyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257149430|emb|CAR88403.1| Lysyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 498

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 119/275 (43%), Gaps = 32/275 (11%)

Query: 2   HRY-RTHSCG----DLGVSDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTHS      + G  D  +       V ++G +   R  G + F DIRD  G  Q+
Sbjct: 35  HRFDRTHSAAKVREEFGEDDKETLLEEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 94

Query: 51  VANPDSACFE---IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
               D    E   I K      +L I G VM            T   EL+ +   +  +A
Sbjct: 95  YVRKDVVGDENYMIFKKADLGDILGISGEVMK-----------TDSGELTVKANHVTHLA 143

Query: 108 EEL-PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           + L PLP           +++ R+LDL    D+  +  VKRT+I++++R  +    F+E 
Sbjct: 144 KALRPLPDKWHGLTDVEQKYRKRYLDLISNPDSFDR-FVKRTKIVSAVREYLDNHGFLEV 202

Query: 165 STPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP+L   +    AR F+          Y L  A + + + L+  G +R ++I   FR+E
Sbjct: 203 ETPVLHNQAGGANARPFITHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNE 261

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
              +   P EF +L+   ++ +  D++   E + R
Sbjct: 262 GIDTKHNP-EFTELETYAAYWDLSDVMVETEGIFR 295



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 8/52 (15%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GI  + VE        A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 451 GIDDDYVE--------ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 494


>gi|212710039|ref|ZP_03318167.1| hypothetical protein PROVALCAL_01092 [Providencia alcalifaciens DSM
           30120]
 gi|212687246|gb|EEB46774.1| hypothetical protein PROVALCAL_01092 [Providencia alcalifaciens DSM
           30120]
          Length = 505

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 117/260 (45%), Gaps = 13/260 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + D+   V ++G +   R  G   F  ++D  G  Q+  + D     I      +W L  
Sbjct: 60  LEDLNVEVTIAGRMMTRRIMGKASFATLQDVGGRIQIYVSRDDLPEGIYNEQFKKWDL-- 117

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++            TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 118 -GDILGAKGRLFKTK--TGELTVHCHEVRLLTKALR-PLPDKFHGLSDQETRYRQRYLDL 173

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D      + R++I+  +R  M+   F+E  TP++    P GA  R F+         
Sbjct: 174 IANDESRNTFIIRSKILAEVRNFMVDHGFMEVETPMMQVI-PGGASARPFVTHHNALDID 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++
Sbjct: 233 MY-LRIAPELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMELYMAYADYRDLI 290

Query: 251 NTMENVLRGVFEEFSNGNTV 270
              E++ R +  +   GNTV
Sbjct: 291 VLTEDLFR-ILTQKVLGNTV 309



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 463 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 498


>gi|148266976|ref|YP_001245919.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393023|ref|YP_001315698.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151220691|ref|YP_001331513.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|253730985|ref|ZP_04865150.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253735252|ref|ZP_04869417.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257424629|ref|ZP_05601057.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257427295|ref|ZP_05603696.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257429932|ref|ZP_05606318.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257432634|ref|ZP_05608996.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257435538|ref|ZP_05611588.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257794243|ref|ZP_05643222.1| lysyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258407240|ref|ZP_05680385.1| lysyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420792|ref|ZP_05683728.1| lysyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258429634|ref|ZP_05688308.1| lysyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258446096|ref|ZP_05694257.1| lysyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448004|ref|ZP_05696134.1| lysyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258452802|ref|ZP_05700797.1| lysyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258453850|ref|ZP_05701823.1| lysyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|282895125|ref|ZP_06303345.1| lysyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282903103|ref|ZP_06310995.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282904892|ref|ZP_06312752.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282907839|ref|ZP_06315677.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910155|ref|ZP_06317961.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913345|ref|ZP_06321136.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282915835|ref|ZP_06323603.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282918298|ref|ZP_06326038.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282923049|ref|ZP_06330735.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282925592|ref|ZP_06333245.1| lysyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|283768952|ref|ZP_06341861.1| lysyl-tRNA synthetase class II [Staphylococcus aureus subsp. aureus
           H19]
 gi|283957307|ref|ZP_06374765.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500394|ref|ZP_06666246.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293509333|ref|ZP_06668049.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293515921|ref|ZP_06670611.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|297591571|ref|ZP_06950208.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|304380535|ref|ZP_07363211.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|147740045|gb|ABQ48343.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149945475|gb|ABR51411.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150373491|dbj|BAF66751.1| lysyl-tRNA synthetase, class-2 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|253725297|gb|EES94026.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253726812|gb|EES95541.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257272656|gb|EEV04776.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257275946|gb|EEV07414.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257279448|gb|EEV10043.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257282499|gb|EEV12632.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257285175|gb|EEV15292.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257788215|gb|EEV26555.1| lysyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257841198|gb|EEV65647.1| lysyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843184|gb|EEV67597.1| lysyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257849693|gb|EEV73660.1| lysyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257855073|gb|EEV78015.1| lysyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858694|gb|EEV81567.1| lysyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257859488|gb|EEV82341.1| lysyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257864021|gb|EEV86776.1| lysyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|282314568|gb|EFB44955.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317864|gb|EFB48233.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282320326|gb|EFB50668.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282322816|gb|EFB53136.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282326003|gb|EFB56309.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328315|gb|EFB58590.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282332009|gb|EFB61518.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282592496|gb|EFB97508.1| lysyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282596529|gb|EFC01489.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282762543|gb|EFC02683.1| lysyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|283461133|gb|EFC08219.1| lysyl-tRNA synthetase class II [Staphylococcus aureus subsp. aureus
           H19]
 gi|283791231|gb|EFC30041.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290921329|gb|EFD98387.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096354|gb|EFE26614.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291467878|gb|EFF10388.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|297575440|gb|EFH94157.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|302750408|gb|ADL64585.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304340939|gb|EFM06863.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312436392|gb|ADQ75463.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|320139396|gb|EFW31274.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320144173|gb|EFW35941.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177]
          Length = 515

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 130/285 (45%), Gaps = 19/285 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAK 63
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D      F++ K
Sbjct: 67  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 126

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
           +     ++ ++G++   +         TG++ + A+K  +L+ +   LP    G ++  +
Sbjct: 127 NADLGDIVGVEGVMFKTN---------TGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQ 177

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
             R++ R+LDL   +   +  + R++II  MR  +  + F+E  TP++   +    AR F
Sbjct: 178 --RYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPF 235

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +        + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++ 
Sbjct: 236 VTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELY 293

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            ++ +  DI++  E+++R +  E      V  N   I  + A  R
Sbjct: 294 EAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTR 338



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 475 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 510


>gi|315917959|ref|ZP_07914199.1| asparaginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC
           25563]
 gi|313691834|gb|EFS28669.1| asparaginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 461

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 127/308 (41%), Gaps = 59/308 (19%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD---HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGL 76
           V+L  WV ++R      FL+I D    YGI QVV +     F EI++   +  V+    L
Sbjct: 19  VKLGAWVRKIRSQKNFGFLEINDGSFFYGI-QVVFDTSLENFDEISRLSIASSVIVEGTL 77

Query: 77  VMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           V S  A         GQ  E+ A K+E+   A+ L  P+  +R   E +R K   L  R 
Sbjct: 78  VKSEGA---------GQEFEIKASKVEVCQKAD-LDYPLQNKRHSFEFLRTKSH-LRART 126

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRV 186
           +T       R+    ++      +NF+   TPI+T+S  EGA +           VP   
Sbjct: 127 NTFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITSSDAEGAGEMFRITTLDLNNVPKNE 186

Query: 187 N-----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +     Q  F+          QL      + F   +   P FR E   + R   EF+ ++
Sbjct: 187 DGSINFQKDFFGKSTNLTVSGQLNGETYCAAFRNIYTFGPTFRAEYSNTARHASEFWMIE 246

Query: 239 MEMSFVEQDDILNTMENVL-----------------------RGVFEEFSNGNTVSNNFL 275
            EM+F + +  ++  E ++                       +G+F++ +  N ++N+F 
Sbjct: 247 PEMAFADLEVNMDIAEKMVKYIIRYVMETCPEEMNFFNQFIEKGLFDKLN--NVLNNDFG 304

Query: 276 RICYDDAI 283
           R+ Y +AI
Sbjct: 305 RLTYTEAI 312



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 4/78 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E++    + +G+ KE     +       + G  PH G   G +R++M 
Sbjct: 384 EIIGGSQREDNLEILETRMNELGMDKE----DYSFYLDLRKYGSFPHSGYGLGFERMIMY 439

Query: 550 LLGAKNVREVSLFPMSQN 567
           L G  N+R+V  FP + N
Sbjct: 440 LTGMANIRDVIPFPRTPN 457


>gi|288929148|ref|ZP_06422993.1| asparagine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329250|gb|EFC67836.1| asparagine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 467

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 30/274 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L  +D GS V + GWV   R    + F+ + D   I   Q+V +P     E+ 
Sbjct: 6   RTKIVDVLQRTDFGSEVNVKGWVRTHRSSKVVDFIALNDGSTINNVQIVVDPTKFDTELL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           K + +   +   G ++    +  N+ I   +++L      +     + P+   G+  EY 
Sbjct: 66  KQITTGACVSATGKLVESQGQGQNSEIQCTELQL------LGGCGSDYPMQKKGQTFEYM 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-F 180
                ++  L LR +T    +  R  +  ++        F    TPI+TAS  EGA + F
Sbjct: 120 R----QHAHLRLRTNTFGAVMRIRHNMAIAIHQYFHEHGFFYFHTPIITASDAEGAGEMF 175

Query: 181 LVPSR------------VN-QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDED 224
            V ++            VN    F+    +     QL   L A+   + +   P FR E+
Sbjct: 176 QVTTKKLDDLKKDEDGKVNYNDDFFGKMTSLTVSGQLEGELGATALGQIYTFGPTFRAEN 235

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             + R   EF+ ++ EM+F++ DD+++T E+ ++
Sbjct: 236 SNTPRHLAEFWMIEPEMAFIDLDDLMDTEEDFIK 269


>gi|229551628|ref|ZP_04440353.1| lysine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|229315032|gb|EEN81005.1| lysine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
          Length = 499

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 119/275 (43%), Gaps = 32/275 (11%)

Query: 2   HRY-RTHSCG----DLGVSDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTHS      + G  D  +       V ++G +   R  G + F DIRD  G  Q+
Sbjct: 36  HRFDRTHSAAKVREEFGEDDKETLLEEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 95

Query: 51  VANPDSACFE---IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
               D    E   I K      +L I G VM            T   EL+ +   +  +A
Sbjct: 96  YVRKDVVGDENYMIFKKADLGDILGISGEVMK-----------TDSGELTVKANHVTHLA 144

Query: 108 EEL-PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           + L PLP           +++ R+LDL    D+  +  VKRT+I++++R  +    F+E 
Sbjct: 145 KALRPLPDKWHGLTDVEQKYRKRYLDLISNPDSFDR-FVKRTKIVSAVREYLDNHGFLEV 203

Query: 165 STPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP+L   +    AR F+          Y L  A + + + L+  G +R ++I   FR+E
Sbjct: 204 ETPVLHNQAGGANARPFITHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNE 262

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
              +   P EF +L+   ++ +  D++   E + R
Sbjct: 263 GIDTKHNP-EFTELETYAAYWDLSDVMVETEGIFR 296



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 460 ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 495


>gi|199598782|ref|ZP_03212194.1| Lysyl-tRNA synthetase (class II) [Lactobacillus rhamnosus HN001]
 gi|199590287|gb|EDY98381.1| Lysyl-tRNA synthetase (class II) [Lactobacillus rhamnosus HN001]
          Length = 498

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 119/275 (43%), Gaps = 32/275 (11%)

Query: 2   HRY-RTHSCG----DLGVSDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTHS      + G  D  +       V ++G +   R  G + F DIRD  G  Q+
Sbjct: 35  HRFDRTHSAAKVREEFGEDDKETLLEEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 94

Query: 51  VANPDSACFE---IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
               D    E   I K      +L I G VM            T   EL+ +   +  +A
Sbjct: 95  YVRKDVVGDENYMIFKKADLGDILGISGEVMK-----------TDSGELTVKANHVTHLA 143

Query: 108 EEL-PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           + L PLP           +++ R+LDL    D+  +  VKRT+I++++R  +    F+E 
Sbjct: 144 KALRPLPDKWHGLTDVEQKYRKRYLDLISNPDSFDR-FVKRTKIVSAVREYLDNHGFLEV 202

Query: 165 STPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP+L   +    AR F+          Y L  A + + + L+  G +R ++I   FR+E
Sbjct: 203 ETPVLHNQAGGANARPFITHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNE 261

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
              +   P EF +L+   ++ +  D++   E + R
Sbjct: 262 GIDTKHNP-EFTELETYAAYWDLSDVMVETEGIFR 295



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 26/35 (74%)

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 460 LEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 494


>gi|168491566|ref|ZP_02715709.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|225859297|ref|YP_002740807.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|183574309|gb|EDT94837.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|225720590|gb|ACO16444.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 447

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|148988588|ref|ZP_01820021.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147925789|gb|EDK76864.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 447

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGIKHIREAIPFP 439


>gi|317493836|ref|ZP_07952253.1| lysyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918163|gb|EFV39505.1| lysyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 505

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 132/293 (45%), Gaps = 24/293 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + D+   V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L  
Sbjct: 61  LEDLNVEVSVAGRMMTRRIMGKAAFVTLQDMGGRIQLYVARDDLPEGLYNDQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   +I +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDIIGARGKVFRTQ--TGELSIHCTEIRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
             +   +   + R++ + ++R  M+ + F+E  TP++    P GA  R F+         
Sbjct: 175 IANEESRETFRIRSKTLAAIRSFMVNKGFMEVETPMMQVI-PGGASARPFITHHNALDID 233

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++
Sbjct: 234 MY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLI 291

Query: 251 NTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDKPDLR 294
              E++ R + +E    + V            F+++   ++I  Y   +PD++
Sbjct: 292 VLTEDLFRTLTQEVLGSSIVQYGDQTFDFGKPFIKMTMKESINHY---RPDIK 341



 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 464 SLEHGLPPTAGLGIGIDRMMMLFTNSHTIRDVILFP 499


>gi|259650774|dbj|BAI42936.1| lysyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 499

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 119/275 (43%), Gaps = 32/275 (11%)

Query: 2   HRY-RTHSCG----DLGVSDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTHS      + G  D  +       V ++G +   R  G + F DIRD  G  Q+
Sbjct: 36  HRFDRTHSAAKVREEFGEDDKETLLEEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 95

Query: 51  VANPDSACFE---IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
               D    E   I K      +L I G VM            T   EL+ +   +  +A
Sbjct: 96  YVRKDVVGDENYMIFKKADLGDILGISGEVMK-----------TDSGELTVKANHVTHLA 144

Query: 108 EEL-PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           + L PLP           +++ R+LDL    D+  +  VKRT+I++++R  +    F+E 
Sbjct: 145 KALRPLPDKWHGLTDVEQKYRKRYLDLISNPDSFDR-FVKRTKIVSAVREYLDNHGFLEV 203

Query: 165 STPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP+L   +    AR F+          Y L  A + + + L+  G +R ++I   FR+E
Sbjct: 204 ETPVLHNQAGGANARPFITHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNE 262

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
              +   P EF +L+   ++ +  D++   E + R
Sbjct: 263 GIDTKHNP-EFTELETYAAYWDLSDVMVETEGIFR 296



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 460 ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 495


>gi|258620334|ref|ZP_05715372.1| lysyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258587213|gb|EEW11924.1| lysyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 512

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 107/216 (49%), Gaps = 16/216 (7%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150
           G + ++ ++ ++L+ A   PLP        + +R++ R++DL  +   +N  V R+++++
Sbjct: 135 GDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFVVRSKVMS 193

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 194 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 251

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V  E     
Sbjct: 252 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGST 310

Query: 269 TV---------SNNFLRICYDDAIRRYGTDKPDLRN 295
           ++            + R+   DAI+ Y  +   +++
Sbjct: 311 SMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQS 346



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 471 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 506


>gi|307111559|gb|EFN59793.1| hypothetical protein CHLNCDRAFT_33640 [Chlorella variabilis]
          Length = 405

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 26/196 (13%)

Query: 93  QIELSAQKIEILSVAEELPLPVFGEREYPESIR-----------------FKYRFLDLRR 135
           Q+EL    I ++S +  LP  V       E++R                    R++DLR 
Sbjct: 34  QVELQVTAIHVVSRSAPLPFEVTDAARSAEAVRKAAEAGKVLVTVGQDVRLDNRYVDLRT 93

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFLVPSRVNQGSFYAL 194
                    ++ + +  R  +  + FIE  TP +L+ +S  GA  F        G    L
Sbjct: 94  PANQAIFRVQSAVCHLFRESLQGQGFIEIHTPKLLSGASEGGAAVFHFDYMGRPG---CL 150

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM----SFVEQDDIL 250
            Q+PQ YKQ+ + S   R F+I P FR E+  + R   EF  LDMEM    S+ E  D+L
Sbjct: 151 AQSPQFYKQMAICSDLARVFEIGPVFRAENSYTHRHLCEFTGLDMEMAIHESYHEVLDVL 210

Query: 251 NTM-ENVLRGVFEEFS 265
           + +  ++ +G+ E+++
Sbjct: 211 DALFVHMFKGLNEQYA 226



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 4/76 (5%)

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G EI SG  R H   ++ Q    +G+  + +++       +F+ G+PPHGG   G++R+V
Sbjct: 326 GEEIISGAQRVHDPVLLTQRAVELGLPVDTIQSYID----SFKYGVPPHGGAGVGMERVV 381

Query: 548 MLLLGAKNVREVSLFP 563
           ML  G  N+R+ S+FP
Sbjct: 382 MLFCGLDNIRKTSMFP 397


>gi|89900573|ref|YP_523044.1| lysyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|89345310|gb|ABD69513.1| lysyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 520

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 131/287 (45%), Gaps = 24/287 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G+ + G+  +++G +   R  G   F  ++D  G  Q+    +    E+  S +  W L 
Sbjct: 63  GLIEQGATAKVAGRMMLKRVMGKASFATLQDSTGRIQLYIKGEDVGAEVYASFK-HWDL- 120

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G +++   +       TG++ + A  + +L+ +   P+P        +  +++ R++D
Sbjct: 121 --GDIVAAEGKIFKTK--TGELSIHATSLRLLTKSLR-PMPDKFHGMNDQETKYRQRYVD 175

Query: 133 LRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP-SRVNQ 188
           L  D T       R++ ++ +R  M+A +F+E  TP+L    P GA  + F    + ++Q
Sbjct: 176 LMMDETARARFTARSKAVSGIREFMVAHDFLEVETPMLH-PIPGGANAKPFTTHHNALDQ 234

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             F  +  AP+ Y + L+  GF+R F+I   FR+E       P EF  ++   ++ +  D
Sbjct: 235 QMFLRI--APELYLKRLIVGGFERVFEINRSFRNEGISVRHNP-EFTMMEFYAAYWDYQD 291

Query: 249 ILNTMENVLR-------GVFEEFSNGNTV--SNNFLRICYDDAIRRY 286
           ++   E ++R       G  E    G  V  +  F R+   +AI ++
Sbjct: 292 LMTFTEKLIRDAAQKAVGTLELSYGGRAVDLTQPFERLTIHEAICKF 338



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   G+DR++MLL  + ++R+V LFP
Sbjct: 478 RALEYGMPPTGGCGVGLDRLMMLLTDSSSIRDVILFP 514


>gi|312880305|ref|ZP_07740105.1| lysyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783596|gb|EFQ23994.1| lysyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 503

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 21/269 (7%)

Query: 24  SGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VMSRSA 82
           +G V  +R HG   F  + D +   Q+    D    E A +   +WV   D L V  R  
Sbjct: 70  AGRVMTLRRHGKAAFATLEDEHHRLQMYFQFDELG-EKAYTFFKKWVDTGDLLGVAGRPF 128

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----RRDT 137
            T       G++ L   +  +LS A   PLP        + +R++ R++DL      RDT
Sbjct: 129 RTQR-----GELSLKVSQFTLLSKALR-PLPEKWHGLKDQEVRYRQRYVDLIANPEVRDT 182

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
             K    RTRII + R  + A + +E  TPIL+  +    AR F+          Y L  
Sbjct: 183 FRK----RTRIIQTFRRVLEAHDTLEVGTPILSPLAGGANARPFVTFHNALGIPMY-LRI 237

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + Y + L+   F R ++I P FR+E       P EF  +++  S+   +D+++  E +
Sbjct: 238 ATELYLKRLIVGMFGRVYEIGPNFRNEGIDLKHNP-EFTAMEVYWSYANYEDMMDLCEEI 296

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           L    +E  +  TV+     I ++   RR
Sbjct: 297 LVACADEVGS-RTVTYQGTEISFEPPFRR 324



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL  ++++R+V LFP
Sbjct: 462 ALEYGLPPTGGMGIGIDRLVMLLTDSRSIRDVILFP 497


>gi|238796546|ref|ZP_04640053.1| Lysyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238719524|gb|EEQ11333.1| Lysyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 505

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 21/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+  + D     +      +W L   G ++  
Sbjct: 68  VTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYNEEFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 RGKLFKTK--TGELSIHCNELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  K R+++++ +R  M+ + F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 NTFKVRSQVMSGIRSFMVEKGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E + 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286
           R + E     + V            F ++   +AI +Y
Sbjct: 299 RTLTENILGSSVVQYGEQTFDFGKPFAKLTMKEAICKY 336



 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F++   +KE  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|322516976|ref|ZP_08069866.1| asparagine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322124459|gb|EFX95954.1| asparagine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 448

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 112/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  + +  WV      G + FL +RD     Q VA  P+          +  F+  K +
Sbjct: 15  VGEEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKYGEEEGTEKFDTVKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKFG-------YELDVTAVEVIGESHDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR          R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVQQIRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 239 FLSHDESLDLQEAYVKALIQGVIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEAI 295



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDDYDALVAKMDELGMDRS--EYEFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|319639579|ref|ZP_07994326.1| lysyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317399150|gb|EFV79824.1| lysyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 503

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 127/281 (45%), Gaps = 22/281 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+++G +   R  G   F  I+D  G  Q+  N      E+     + W L   G +
Sbjct: 65  GIPVKVAGRMMLKRQMGKASFATIQDVTGQIQLYLNNKGVSQEVLDDF-NHWDL---GDI 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +         N   G++ +    I +LS +   PLP   +    +  +++ R++DL  + 
Sbjct: 121 VGAKGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKYRQRYVDLIANE 177

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYAL 194
             +N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+          Y L
Sbjct: 178 ESRNTFIKRSQIIQSVRNFMVNEHYLEVETPMMHP-IPGGATAKPFVTHHNALDIPLY-L 235

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F + + ++   E
Sbjct: 236 RIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAFSDYERMMQMAE 294

Query: 255 NVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           +++R      +    +S N         F R+   +AI++Y
Sbjct: 295 DIIRNASRAVNGTAKISYNGKEVDLESPFERLTILEAIKKY 335



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|289579208|ref|YP_003477835.1| lysyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528921|gb|ADD03273.1| lysyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 499

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 30/285 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74
           G  V L+G +   R HG   F DI+D  G  Q+    D+     +EI K +    ++ + 
Sbjct: 60  GKVVTLAGRIMSKRTHGKASFADIQDREGRIQIYVKYDTVGEKNYEIFKILDIGDIIGVT 119

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           G V             TG+I +  +  ++LS + + LP    G ++    +R++ R+ DL
Sbjct: 120 GEVFKSK---------TGEITIRVKDFKLLSKSLQILPEKWHGLKD--PDLRYRQRYTDL 168

Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +   K I +KRT+II ++R  +    F+E  TPIL T +    AR F+          
Sbjct: 169 IINPEVKEIFLKRTKIIKAIREFLDDRGFLEVETPILHTIAGGAAARPFITHHNALDIDM 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G ++ +++   FR+E       P EF  L++  ++ +   ++ 
Sbjct: 229 Y-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNP-EFTLLELYEAYTDYYGMME 286

Query: 252 TMENVLRGVFEEFSNGNT----------VSNNFLRICYDDAIRRY 286
             E +   V ++  NG T          ++  + RI   DAI+ Y
Sbjct: 287 LTEQLFAYVAQKV-NGTTKIVYQGTEIDLTPPWKRITMVDAIKEY 330



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VM +  A ++R+V LFP
Sbjct: 457 ALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILFP 492


>gi|258406354|ref|YP_003199096.1| lysyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257798581|gb|ACV69518.1| lysyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 504

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 21/263 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +  Y + S  DL   +V     L+G +  +R  G   F+ I+D  G  QV    D+   +
Sbjct: 48  IQSYESLSAEDL--ENVEHTFALAGRIMAIRSFGKATFMHIQDSTGKLQVFVQRDAVGAD 105

Query: 61  IAKSVRSEWVLCIDGL--VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE 117
           + K  +   V  I G+   + R+         T ++ L A+ +E+++ +   LP    G 
Sbjct: 106 LYKLFKKFDVGDIVGVRGTLFRTR--------TDELTLKAEHVELVTKSMRPLPEKYHGL 157

Query: 118 REYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           ++     R++ R++DL      ++I VKRTRI+  +R  +    F+E  TP++    P G
Sbjct: 158 KDV--ETRYRQRYVDLIVTPQARDIFVKRTRIVQGLRHFLDNRGFMEVETPMM-QHIPGG 214

Query: 177 --ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+          Y L  AP+ Y + L+  G +R ++I   FR+E   +   P EF
Sbjct: 215 ATARPFVTHHNALDMELY-LRIAPELYLKRLLVGGLERVYEINRNFRNEGISTQHNP-EF 272

Query: 235 YQLDMEMSFVEQDDILNTMENVL 257
             L+   ++ +  D+++  E + 
Sbjct: 273 TMLEFYWAYADVYDLMDLTEEMF 295



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL  + ++REV LFP+
Sbjct: 459 RALEYGMPPAAGQGVGIDRLVMLLTDSASIREVILFPL 496


>gi|261199768|ref|XP_002626285.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239594493|gb|EEQ77074.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 609

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 124/253 (49%), Gaps = 11/253 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           +R++G ++  R  G  +IF D+R      QV     +   +++   + E +   D + V+
Sbjct: 128 LRIAGRIYTKRAAGAKLIFYDVRAEGVKIQVACQAQNVTGDVSFEHQHEHLRRGDIIGVV 187

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A ++ +L+    ++P   +G R+  +  R++ R+LDL  + 
Sbjct: 188 GFPGRTAPKNRADGELSIFATEVVLLAPCLHQIPSEHYGLRD--QEQRYRQRYLDLIMND 245

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP-SRVNQGSFYAL 194
             +N+ + R+++I  +R      +FIE  TP++ T +    A+ F+   + +N   F  +
Sbjct: 246 KSRNVFITRSKMITYIRRFFDERDFIEVETPMMNTIAGGATAKPFVTHHNDLNMDMFMRI 305

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  DI+N  E
Sbjct: 306 --APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDIMNVTE 362

Query: 255 NVLRGVFEEFSNG 267
            ++ G+ +  + G
Sbjct: 363 ELVSGLVKHITGG 375



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 541 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576


>gi|169832633|ref|YP_001694947.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|168995135|gb|ACA35747.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 447

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 12/100 (12%)

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
           G +E +   DLL+ + +         EI  G +R    + ++     +G+ +   E  F 
Sbjct: 352 GNLERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMDELGMDR--TEYEFY 401

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              R +  G  PHGG   GI+R+V    G K++RE   FP
Sbjct: 402 LDLRKY--GTVPHGGFGIGIERMVTFAAGTKHIREAIPFP 439


>gi|330752646|emb|CBL87590.1| lysyl-tRNA synthetase [uncultured Flavobacteria bacterium]
          Length = 563

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 130/272 (47%), Gaps = 25/272 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---VLCIDGLV 77
           V ++G +   R  G   F +++D  G  Q+  N D  C    K+  +E+   +L I  ++
Sbjct: 49  VVIAGRLMSRRIQGNASFAELQDSKGKIQLYFNRDEICPNNDKTYYNEFYKKLLDIGDII 108

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLP-------VFGEREYPESIRFKYR 129
                E +      G+  +  +  ++LS + + LPLP       ++ E   PE +R++ R
Sbjct: 109 ---GVEGVLFKTKVGEKTVLVKSFKLLSKSLKPLPLPKEDSEGNIYDEFNDPE-LRYRQR 164

Query: 130 FLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRV 186
           ++DL  ++ + +  +KRT I NS+R  +    ++E  TPIL    P G  AR FL     
Sbjct: 165 YVDLIVNSGVKETFIKRTLITNSIREFLNQREYLEVETPILQP-IPGGATARPFLTHHNA 223

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  A + Y + L+  GFD  ++ A  FR+E       P EF  L++ +S+ + 
Sbjct: 224 LNIPLY-LRIANELYLKRLIVGGFDGVYEFAKDFRNEGMDRTHNP-EFTILELYVSYKDY 281

Query: 247 DDILNTMENVLRGVFEEFSNGNT---VSNNFL 275
           + +++  E +L  V  + S GNT   V NN +
Sbjct: 282 NWMMDMTERLLEKVSID-STGNTKVKVGNNII 312



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 18/127 (14%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQA--------FSNVGISKEVVENRFGGLYRAFQCG 532
           +++L+ NG EIA+    + +++ + Q          S  G  KE  E       RA + G
Sbjct: 405 RFELIVNGKEIANA--YSELNDPIDQKERFEKQLELSKKG-DKEAGEFIDYDFLRALEYG 461

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           MPP  GI  GIDR+VML+    +++EV  FP        +      VS+ +  EL  +I+
Sbjct: 462 MPPTSGIGIGIDRLVMLMTDNSSIQEVLFFPQ-------MRPEKKKVSLTEKEELIFKIL 514

Query: 593 ENPKKIL 599
            N  ++L
Sbjct: 515 SNENQLL 521


>gi|126173118|ref|YP_001049267.1| lysyl-tRNA synthetase [Shewanella baltica OS155]
 gi|153002000|ref|YP_001367681.1| lysyl-tRNA synthetase [Shewanella baltica OS185]
 gi|160876720|ref|YP_001556036.1| lysyl-tRNA synthetase [Shewanella baltica OS195]
 gi|217974575|ref|YP_002359326.1| lysyl-tRNA synthetase [Shewanella baltica OS223]
 gi|304410530|ref|ZP_07392148.1| lysyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307304623|ref|ZP_07584373.1| lysyl-tRNA synthetase [Shewanella baltica BA175]
 gi|166229825|sp|A3D0Y5|SYK_SHEB5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229826|sp|A6WS29|SYK_SHEB8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189082968|sp|A9L1I0|SYK_SHEB9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|125996323|gb|ABN60398.1| lysyl-tRNA synthetase [Shewanella baltica OS155]
 gi|151366618|gb|ABS09618.1| lysyl-tRNA synthetase [Shewanella baltica OS185]
 gi|160862242|gb|ABX50776.1| lysyl-tRNA synthetase [Shewanella baltica OS195]
 gi|217499710|gb|ACK47903.1| lysyl-tRNA synthetase [Shewanella baltica OS223]
 gi|304351014|gb|EFM15414.1| lysyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306912025|gb|EFN42449.1| lysyl-tRNA synthetase [Shewanella baltica BA175]
 gi|315268920|gb|ADT95773.1| lysyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 500

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 26/226 (11%)

Query: 90  ITGQIELSA--------QKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           +TGQ+ LS         ++ E+L+ A   LP   +G  +  + +R++ R++DL  +   +
Sbjct: 113 VTGQLHLSGKGDLYVNMEQYELLTKALRPLPADYYGLAD--QEMRYRQRYVDLIVNEDSR 170

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  + R+++++++R  MI + F+E  TP++    P GA  R F+          Y L  A
Sbjct: 171 NAFIMRSKVVSAIRNFMIKKEFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIA 228

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L
Sbjct: 229 PELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEEML 287

Query: 258 RGVFEEFSNG-------NTVS--NNFLRICYDDAIRRYGTDKPDLR 294
             +  E           +TV     + R+   +AI++Y  D   ++
Sbjct: 288 SSIAIELLGSAQMPYGEHTVDFGGPYARLSMLEAIQKYNPDNATIQ 333



 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|304315888|ref|YP_003851033.1| lysyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302777390|gb|ADL67949.1| lysyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 506

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 119/259 (45%), Gaps = 19/259 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCID 74
           G  V ++G +   R HG   F DI+D  G  Q+    D      +EI K +    ++ + 
Sbjct: 58  GKTVTIAGRIMSKRGHGKASFADIQDRDGRIQLYFKLDVLGEKNYEIFKILDIGDIIGVT 117

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
           G V             TG++ +  Q  ++LS + + LP    G ++    +R++ R++DL
Sbjct: 118 GEVFKSK---------TGEVTIRVQDFKLLSKSLQVLPDKWHGLKD--PDLRYRQRYVDL 166

Query: 134 RRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +  + +  +KRT II ++R  + +  FIE  TPIL T +    AR F+          
Sbjct: 167 IINPGVKETFIKRTAIIKAIREFLDSRGFIEVETPILHTIAGGAAARPFITHHNALDIDM 226

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G ++ +++   FR+E       P EF  L++  ++ +   +++
Sbjct: 227 Y-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNP-EFTLLELYEAYTDYHGMMD 284

Query: 252 TMENVLRGVFEEFSNGNTV 270
             EN+   V E+ +    +
Sbjct: 285 ITENLFAYVAEKVNGSKKI 303



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR++M +  A ++R+V LFP
Sbjct: 455 ALEVGMPPTGGLGIGVDRLIMFMTDAYSIRDVILFP 490


>gi|2501020|sp|Q53638|SYK_STAAU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|567884|gb|AAA53114.1| lysyl-tRNA synthetase [Staphylococcus aureus]
          Length = 495

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 130/285 (45%), Gaps = 19/285 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAK 63
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D      F++ K
Sbjct: 47  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 106

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
           +     ++ ++G++   +         TG++ + A+K  +L+ +   LP    G ++  +
Sbjct: 107 NADLGDIVGVEGVMFKTN---------TGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQ 157

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
             R++ R+LDL   +   +  + R++II  MR  +  + F+E  TP++   +    AR F
Sbjct: 158 --RYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPF 215

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +        + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++ 
Sbjct: 216 VTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELY 273

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            ++ +  DI++  E+++R +  E      V  N   I  + A  R
Sbjct: 274 EAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTR 318



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490


>gi|262172259|ref|ZP_06039937.1| lysyl-tRNA synthetase (class II) [Vibrio mimicus MB-451]
 gi|261893335|gb|EEY39321.1| lysyl-tRNA synthetase (class II) [Vibrio mimicus MB-451]
          Length = 510

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 103/207 (49%), Gaps = 16/207 (7%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150
           G + ++ ++ ++L+ A   PLP        + +R++ R++DL  +   +N  V R+++++
Sbjct: 133 GDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFVVRSKVMS 191

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 192 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V  E     
Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGST 308

Query: 269 TV---------SNNFLRICYDDAIRRY 286
           ++            + R+   DAI+ Y
Sbjct: 309 SMPYGEHTVEFGGKYARMSMFDAIKHY 335



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 469 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504


>gi|148984890|ref|ZP_01818143.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147922912|gb|EDK74028.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301800375|emb|CBW33006.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 447

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294


>gi|323438751|gb|EGA96491.1| lysyl-tRNA synthetase [Staphylococcus aureus O11]
          Length = 495

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 130/285 (45%), Gaps = 19/285 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAK 63
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D      F++ K
Sbjct: 47  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 106

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
           +     ++ ++G++   +         TG++ + A+K  +L+ +   LP    G ++  +
Sbjct: 107 NADLGDIVGVEGVMFKTN---------TGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQ 157

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
             R++ R+LDL   +   +  + R++II  MR  +  + F+E  TP++   +    AR F
Sbjct: 158 --RYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPF 215

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +        + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++ 
Sbjct: 216 VTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELY 273

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            ++ +  DI++  E+++R +  E      V  N   I  + A  R
Sbjct: 274 EAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTR 318



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490


>gi|324994044|gb|EGC25963.1| asparagine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324994634|gb|EGC26547.1| asparagine--tRNA ligase [Streptococcus sanguinis SK678]
 gi|327490037|gb|EGF21826.1| asparagine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 448

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAI 295



 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++   + +G+  +  E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNELGM--DTTEYEFYLDLRKY--GTVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|308048395|ref|YP_003911961.1| lysyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307630585|gb|ADN74887.1| lysyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 493

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 15/174 (8%)

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFL 181
           R++ R++DL  +   +N  K R+++I ++R  M   +F+E  TP++    P GA  R F+
Sbjct: 154 RYRQRYVDLIVNEESRNTFKVRSKVIAAIRQYMTDRDFMEVETPMMQVI-PGGASARPFI 212

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M
Sbjct: 213 THHNALDQDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYM 270

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           ++ +  D+++  E++LR V E+      V            F R+   +AI +Y
Sbjct: 271 AYADYRDLMDLTEDMLRTVTEQVLGSAKVKYGEEEFDFGAPFARMSMREAILKY 324



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EIA+G    + +E   Q F +   +KE  ++    F G Y  A + G+PP 
Sbjct: 401 RFEFFVGGREIANGFSELNDAEDQKQRFLDQVKAKESGDDEAMFFDGDYVTALEHGLPPT 460

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML   +  +R+V LFP
Sbjct: 461 AGQGIGIDRLVMLFTDSHTIRDVILFP 487


>gi|293365829|ref|ZP_06612534.1| asparagine-tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307703302|ref|ZP_07640247.1| asparaginyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291315653|gb|EFE56101.1| asparagine-tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623168|gb|EFO02160.1| asparaginyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 447

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYTTYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMEELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|229825232|ref|ZP_04451301.1| hypothetical protein GCWU000182_00584 [Abiotrophia defectiva ATCC
           49176]
 gi|229790604|gb|EEP26718.1| hypothetical protein GCWU000182_00584 [Abiotrophia defectiva ATCC
           49176]
          Length = 636

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 122/281 (43%), Gaps = 26/281 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F ++ D YG  Q     DS     +   K      V+ + G V
Sbjct: 58  VTIAGRMMFKRIMGKASFCNLSDRYGSMQCYVARDSIGEEAYADFKKYDVGDVIGVKGFV 117

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                        TG+I + A+++ +LS +   PLP           R++ R+LDL  + 
Sbjct: 118 FKTK---------TGEISVHAEEVTLLSKSLR-PLPEKYHGLKDTEARYRQRYLDLIMNQ 167

Query: 138 LHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPSRVNQGSFYALP 195
             +N   KR++I+  +R  +  ++F+E  TP+L  ++    AR F             L 
Sbjct: 168 DVRNTFEKRSQILKEIRSFLAEKDFMEVETPLLVENAGGAAARPFFTHYNALDEE-RKLR 226

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            + + Y + L+  GF+R F+I   FR+E   +   P EF  +++  ++ + + +++  E 
Sbjct: 227 ISLELYLKRLIVGGFERVFEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYNGMMDLTEE 285

Query: 256 VLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           + R + E+      +S N         F RI   DA++ Y 
Sbjct: 286 MFRYLAEKVCGSAVISYNGIELDFSKPFKRITMLDAVKDYS 326



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+VMLL  + ++R+V LFP
Sbjct: 452 ALEYGMPPTGGIGYGIDRLVMLLTDSASIRDVLLFP 487


>gi|253988707|ref|YP_003040063.1| lysyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|211637968|emb|CAR66596.1| lysyl-trna synthetase (ec 6.1.1.6) (lysine--trna ligase) (lysrs)
           [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253780157|emb|CAQ83318.1| lysyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 504

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 144/340 (42%), Gaps = 33/340 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + G +   R  G   F+ ++D  G  Q+    D     I      +W L   G ++  
Sbjct: 67  VTVGGRMMTRRIMGKASFVTLQDAGGRIQLYVARDDLPEGIYNEQFKKWDL---GDILGA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL   +   
Sbjct: 124 RGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANEESR 180

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           K    R+++++ MR  +I++ F+E  TP++        AR F+          Y L  AP
Sbjct: 181 KTFQIRSQVLSVMRNFIISKGFMEVETPMMQVIPGGAAARPFVTHHNALDIDMY-LRIAP 239

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  L++ M++ +  D++  +E + R
Sbjct: 240 ELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMLELYMAYADYKDLIVLIEELFR 298

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
                     T++ N L     D   +YG  + D   P    ++ E     ++R  + + 
Sbjct: 299 ----------TLAQNVL----GDTRVKYGEQEFDFGKPFAQMSMKEAIC--KYRPETNMA 342

Query: 319 SVNPGYEVWAIP-------AKGGGGNRAFCDRMNEWARSQ 351
            ++   +  AI         KG G  R  C+   E A S+
Sbjct: 343 DLDDMDKAVAIAESLGIDVEKGWGLGRVQCEIFEETAESR 382



 Score = 44.3 bits (103), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 463 ALEHGMPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 498


>gi|168493443|ref|ZP_02717586.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183576419|gb|EDT96947.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 447

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|323351392|ref|ZP_08087048.1| asparagine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322122616|gb|EFX94327.1| asparagine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 448

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAI 295



 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++   +++G+  +  E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNDLGM--DTTEYEFYLDLRKY--GTVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|307705989|ref|ZP_07642813.1| asparaginyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307620462|gb|EFN99574.1| asparaginyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 447

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGFEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|289168358|ref|YP_003446627.1| aspartyl/asparaginyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288907925|emb|CBJ22765.1| aspartyl/asparaginyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 447

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|228477606|ref|ZP_04062239.1| asparaginyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250750|gb|EEK09948.1| asparaginyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 448

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 112/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  + +  WV      G + FL +RD     Q VA  P+          +  F+  K +
Sbjct: 15  VGEEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKYGEEEGTEKFDTVKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKFG-------YELDVTAVEVIGESHDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR          R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVQQIRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 239 FLSHDESLDLQEAYVKALIQGVIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEAI 295



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDDYDALVAKMDELGMDRS--EYEFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|121996858|ref|YP_001001645.1| lysyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|121588263|gb|ABM60843.1| lysyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 495

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 14/211 (6%)

Query: 91  TGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRI 148
           T + ELS Q  EI  + + L PLP          IR++ R+LDL  +   + +   RTR+
Sbjct: 121 TKKGELSIQCEEIRLLTKSLRPLPEKWHGLNDHEIRYRQRYLDLIVNEESQRVFALRTRV 180

Query: 149 INSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           + +MR  +    F+E  TP++        AR F+          Y L  AP+ Y + L+ 
Sbjct: 181 LAAMRRFLDERGFMEVETPMMQPIPGGAAARPFVTHHNALGRDLY-LRIAPELYLKRLVV 239

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            GF+R +++   FR+E   +   P EF  L+   +F +  D+++  E +LR + E+    
Sbjct: 240 GGFERVYEVNRNFRNEGVSTRHNP-EFTMLEFYQAFADYRDLMDLTEEMLRHLAEQALGS 298

Query: 268 NTVS---------NNFLRICYDDAIRRYGTD 289
             V+         ++F RI   +A+ R+ +D
Sbjct: 299 GQVTWQGETYDFASSFERISLIEAVLRFNSD 329



 Score = 43.5 bits (101), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VMLL    ++R+V LFP
Sbjct: 453 RALEYGLPPTAGEGIGIDRLVMLLADCDSIRDVLLFP 489


>gi|325690553|gb|EGD32556.1| asparagine--tRNA ligase [Streptococcus sanguinis SK115]
 gi|332367062|gb|EGJ44802.1| asparagine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 448

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 111/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDS----------ACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVTNKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAI 283
           ++  D+ L+  E  ++ + +   N                   ++  F R  YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLNRAPQALETLERDVELLKRYIAEPFKRFTYDEAI 295



 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++   +++G+  +  E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDTLVAKMNDLGM--DTSEYEFYLDLRKY--GTVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|323442037|gb|EGA99672.1| lysyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 464

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 130/285 (45%), Gaps = 19/285 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAK 63
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D      F++ K
Sbjct: 47  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 106

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
           +     ++ ++G++   +         TG++ + A+K  +L+ +   LP    G ++  +
Sbjct: 107 NADLGDIVGVEGVMFKTN---------TGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQ 157

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
             R++ R+LDL   +   +  + R++II  MR  +  + F+E  TP++   +    AR F
Sbjct: 158 --RYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPF 215

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +        + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++ 
Sbjct: 216 VTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELY 273

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            ++ +  DI++  E+++R +  E      V  N   I  + A  R
Sbjct: 274 EAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTR 318


>gi|156040994|ref|XP_001587483.1| hypothetical protein SS1G_11475 [Sclerotinia sclerotiorum 1980]
 gi|154695859|gb|EDN95597.1| hypothetical protein SS1G_11475 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 968

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 2/130 (1%)

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           +R  P+ +R   R +DLR          ++ I N  R  +  + FIE  TP L   + E 
Sbjct: 331 KRSLPQRVRLNNRIIDLRTTPAQAIFRIQSGICNLFRSYLDTQGFIEIHTPKLQGGATES 390

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                  +   + +F A  Q+PQ  KQ+ +A+ F+R ++I   FR ED  + R   E+  
Sbjct: 391 GATVFELNYFGRSAFLA--QSPQLAKQMCIAADFERVYEIGAVFRAEDSNTPRHLTEYTG 448

Query: 237 LDMEMSFVEQ 246
           LD+EM+  E 
Sbjct: 449 LDLEMALEEH 458



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI +GG R H +E + +     G+  E +     G    F+ G PPH G   
Sbjct: 528 FDIFMRGQEILTGGQRIHDAEFLEKRMKQKGVKPESMPEYLEG----FRWGAPPHAGCGI 583

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+  L L   N+R  SLFP
Sbjct: 584 GLERLTYLFLSLGNIRLASLFP 605


>gi|209559094|ref|YP_002285566.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|209540295|gb|ACI60871.1| Asparaginyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 448

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---------NPDSAC--FEIAKSV 65
           VG  V +  WV      G I F+ +RD     Q VA           +S    F++ K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +EI+  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKFG-------YELDITDLEIIGESHEYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYATYEFFDQNGFIKFDSPILSENAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGKPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYITEPFKRVSYDDAI 295



 Score = 40.4 bits (93), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ K   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDNYDALVAKMDELGMDKS--EYDFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|70991613|ref|XP_750655.1| lysyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66848288|gb|EAL88617.1| lysyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|159124215|gb|EDP49333.1| lysyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 605

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 119/251 (47%), Gaps = 7/251 (2%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           VR++G ++  R  G  + F DIR      QVV    +A  +++   + E +   D + V+
Sbjct: 125 VRIAGRIYTKRSSGSKLFFYDIRAEGVKVQVVCQAQNASGDVSFEAQHEHLRRGDIVGVV 184

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A ++ +L+     +P   +G ++  +  RF+ R+LDL  + 
Sbjct: 185 GFPGRTSPKNRADGELSIFATEVVLLAPCLHAIPSEHYGFQDKEQ--RFRQRYLDLIMNE 242

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
             +N+ V R++I+  +R    + +FIE  TP++ A +        +    +      +  
Sbjct: 243 RSRNVFVTRSKIVRYVRNFFDSRDFIEVETPMMNAIAGGATAKPFITHHNDLDMNLFMRV 302

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  E +
Sbjct: 303 APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNLTEEL 361

Query: 257 LRGVFEEFSNG 267
           + G+ +  + G
Sbjct: 362 ISGLVKHVTGG 372



 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 538 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 573


>gi|324991677|gb|EGC23610.1| asparagine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 448

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAI 295



 Score = 41.2 bits (95), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++   +++G+  +  E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNDLGM--DTTEYEFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|262401637|ref|ZP_06078203.1| lysyl-tRNA synthetase (class II) [Vibrio sp. RC586]
 gi|262352054|gb|EEZ01184.1| lysyl-tRNA synthetase (class II) [Vibrio sp. RC586]
          Length = 510

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 103/207 (49%), Gaps = 16/207 (7%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150
           G + ++ ++ ++L+ A   PLP        + +R++ R++DL  +   +N  V R+++++
Sbjct: 133 GDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFVVRSKVMS 191

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 192 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V  E     
Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGST 308

Query: 269 TV---------SNNFLRICYDDAIRRY 286
           ++            + R+   DAI+ Y
Sbjct: 309 SMPYGEHTVEFGGKYARMSMFDAIKHY 335



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 469 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504


>gi|262163921|ref|ZP_06031660.1| lysyl-tRNA synthetase (class II) [Vibrio mimicus VM223]
 gi|262027449|gb|EEY46115.1| lysyl-tRNA synthetase (class II) [Vibrio mimicus VM223]
          Length = 510

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 103/207 (49%), Gaps = 16/207 (7%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150
           G + ++ ++ ++L+ A   PLP        + +R++ R++DL  +   +N  V R+++++
Sbjct: 133 GDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFVVRSKVMS 191

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 192 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V  E     
Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGST 308

Query: 269 TV---------SNNFLRICYDDAIRRY 286
           ++            + R+   DAI+ Y
Sbjct: 309 SMPYGEHTVEFGGKYARMSMFDAIKHY 335



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 469 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504


>gi|328946519|gb|EGG40659.1| asparagine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 465

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+           A F+  K +
Sbjct: 32  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 91

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 92  SQETSVYVTGIVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 141

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 142 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 197

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 198 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 255

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 256 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAI 312



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++   + +G+  +  E  F    R +  G  PHGG   G
Sbjct: 381 LAPEGYGEIIGGSMREEDYDALVAKMNALGM--DTTEYEFYLDLRKY--GTVPHGGFGIG 436

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 437 IERMVTFVAGTKHIREAIPFP 457


>gi|320033392|gb|EFW15340.1| aspartyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 922

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 43/269 (15%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-----AKSVRSEWV 70
            G  +     +H VR  G  ++FL  R      Q V         I     A+ +R   +
Sbjct: 127 AGQEITFRARLHVVRRMGQKLVFLVFRQQVITLQGVLTEKKGEISILMIQWAEHIRVGSI 186

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVF-------------G 116
           L + G++  R  E          +E+  Q+I ++   EE +P  V+             G
Sbjct: 187 LKVKGVI--RKPEVPVIGTTMHDLEVHIQEIHVIVRREEPIPFSVYEAELPAVEEEKIEG 244

Query: 117 ER-EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS-MRCRMIAENFIECSTPILTASSP 174
            R   P+  R   R LDLR DT  ++I +   +I+S  R  + +  FIE  TP L  ++ 
Sbjct: 245 RRTRVPDRTRLSNRILDLRTDT-SQSIFRIQSVISSYFRSTLDSMGFIEIHTPKLQGAAT 303

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           E              S ++L       KQ+ +AS F+R ++I   FR E+  + R   E+
Sbjct: 304 ESG-----------ASVFSLA------KQMAIASDFERVYEIGAVFRAENSNTHRHLTEY 346

Query: 235 YQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
             LD+EM+  E   + L  ++ V++ +FE
Sbjct: 347 TGLDIEMAIEEHYHESLEVIDQVIKKIFE 375



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SGG R H   ++ +    +G+    +E    G    FQ G+PPH G   
Sbjct: 482 YDIFVRGQEIVSGGQRIHNPIMLEERMRQMGVDPASMEEYMEG----FQWGVPPHAGAGI 537

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R++ML+L   N+R  S+F
Sbjct: 538 GLERMLMLILKLGNIRLASMF 558


>gi|302332230|gb|ADL22423.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 495

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 130/285 (45%), Gaps = 19/285 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAK 63
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D      F++ K
Sbjct: 47  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 106

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
           +     ++ ++G++   +         TG++ + A+K  +L+ +   LP    G ++  +
Sbjct: 107 NADLGDIVGVEGVMFKTN---------TGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQ 157

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
             R++ R+LDL   +   +  + R++II  MR  +  + F+E  TP++   +    AR F
Sbjct: 158 --RYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPF 215

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +        + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++ 
Sbjct: 216 VTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELY 273

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            ++ +  DI++  E+++R +  E      V  N   I  + A  R
Sbjct: 274 EAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTR 318



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490


>gi|290987373|ref|XP_002676397.1| predicted protein [Naegleria gruberi]
 gi|284089999|gb|EFC43653.1| predicted protein [Naegleria gruberi]
          Length = 499

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 104/258 (40%), Gaps = 30/258 (11%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           ++   V + GWV   R    + F+++ D         NP+        S+ +E +  I  
Sbjct: 55  NIDKKVLVEGWVRTSRIQKDVCFVEVNDG------SCNPNLQIVFDKNSIPAEELSKIQN 108

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG---EREYP-----ESIRFK 127
               R         ITGQ+  S  K +   +A    + V G   +  YP      S+ F 
Sbjct: 109 GASVR---------ITGQLIKSPGKGQTTELANPTEVTVLGACPQDVYPLQKKGHSVEFL 159

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGA-RDFLVPS 184
                LR  T     V R R    M      +N  FI+  TPILT+S  EGA   F V S
Sbjct: 160 REISHLRSRTNTGAAVLRVRNAAMMAIHEYFQNLDFIQIHTPILTSSDCEGAGEQFKVIS 219

Query: 185 RVNQGSF----YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
             ++  F     A      Q +  + AS   + +   P FR ED R+ R   EF+ ++ME
Sbjct: 220 EQHKDFFGENVNAYLTVSGQLEAEIFASSMSKVYTFGPTFRAEDSRTSRHLAEFWMVEME 279

Query: 241 MSFVEQDDILNTMENVLR 258
            +F+    I+   EN++R
Sbjct: 280 QAFIGLPQIVEHSENMVR 297



 Score = 40.4 bits (93), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 3/86 (3%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV +  E+  G +R    ++++Q   + G+ K+  +  +    R +  G  PHGG   G 
Sbjct: 415 LVPDLGELIGGSVREERYDILIQNMKDKGM-KDTKDYEWYLDLRKY--GTVPHGGFGLGF 471

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R+++ L G  N+RE      +  FC
Sbjct: 472 ERLILFLTGIPNIRETIPIYRAPGFC 497


>gi|213622455|ref|ZP_03375238.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 81

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 45/73 (61%)

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
           +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+  +PS  +
Sbjct: 4   KFGFLLDALKYGTPPHVGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFAN 63

Query: 581 VEQLRELGLRIVE 593
              L ELG+++V+
Sbjct: 64  QAALTELGIQVVK 76


>gi|125718192|ref|YP_001035325.1| asparaginyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|166232741|sp|A3CNM0|SYN_STRSV RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|125498109|gb|ABN44775.1| Asparaginyl-tRNA synthetase, putative [Streptococcus sanguinis
           SK36]
          Length = 448

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAI 295



 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++   +++G+  +  E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNDLGM--DTTEYEFYLDLRKY--GTVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|85000713|ref|XP_955075.1| lysine-tRNA ligase [Theileria annulata strain Ankara]
 gi|65303221|emb|CAI75599.1| lysine-tRNA ligase, putative [Theileria annulata]
          Length = 470

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 122/258 (47%), Gaps = 29/258 (11%)

Query: 20  FVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVAN-----PDSACF-EIAKSVRSEWVLC 72
            V ++G V R+      + FLDI+      QV AN     P +  F +   +++   ++ 
Sbjct: 23  LVSIAGRVSRIASSSSKLRFLDIKSEGTKLQVFANFANHDPSTGDFNDTYNNIKRGDIIG 82

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G                G++ +  + ++ILS    +    FG ++    +RF+ R+LD
Sbjct: 83  LTGFPGKSK---------RGELSVFPKSVKILSPCLHMLPDKFGLKD--NDVRFRQRYLD 131

Query: 133 LRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP-SRVNQG 189
           L  +     ++K R+RII+ +R  + +  F E  TP+L T S+   A+ F+   + ++  
Sbjct: 132 LMMNDDSLKVMKLRSRIIDYLRKFLTSRGFFEVETPMLKTTSTGASAKPFITHHNELDLD 191

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQD 247
            F  +  AP+   +L++  GF++ F+I  CFR+E  DP  +    EF   +   ++ +  
Sbjct: 192 LFMRI--APELPLKLIIIGGFEKVFEIGKCFRNEGIDPTHN---PEFTSCEFYWAYADYH 246

Query: 248 DILNTMENVLRG-VFEEF 264
           D++   E +L   VFE F
Sbjct: 247 DLMKLTEELLSSLVFELF 264


>gi|221124356|ref|XP_002162882.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 537

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 33/232 (14%)

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LH 139
           +AE       TG++ + A  I +L+ +   P+P        +  +++ R++DL  D    
Sbjct: 153 AAEGTLFKTKTGELSIHATSIRLLTKSLR-PMPDKFHGMADQETKYRQRYVDLMTDVESR 211

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY----ALP 195
           K  V R++ ++++R  M++ NF+E  TP+L            +P   N   F     AL 
Sbjct: 212 KRFVARSKAVSALREFMVSHNFLEVETPMLHP----------IPGGANAKPFKTHHNALD 261

Query: 196 Q------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           Q      AP+ Y + L+  GFDR F+I   +R+E       P EF  ++   ++    D+
Sbjct: 262 QEMFLRIAPELYLKRLIVGGFDRVFEINRSYRNEGISVRHNP-EFTMMEFYAAYWNYQDL 320

Query: 250 LNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDKPD 292
           ++  E ++R    + + G  +S           F R+   +AI++Y TD  D
Sbjct: 321 MDYTEKLIRDAARKATGGLQLSYAGKPVDLEQPFERLTIVEAIQKY-TDAGD 371



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR++MLL  + ++R+V LFP
Sbjct: 495 RALEYGMPPTGGCGIGIDRLMMLLTDSASIRDVILFP 531


>gi|254672942|emb|CBA07339.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha275]
 gi|325136531|gb|EGC59135.1| lysyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 503

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      EI     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEILDDF- 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + W L   G ++         N   G++ +    I +LS +   PLP   +    +  ++
Sbjct: 113 NHWDL---GDIVGAEGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   +N  +KR++II S+R  M+ E ++E  TP++    P G  A+ F+  
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNERYLEVETPMMHP-IPGGATAKPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F
Sbjct: 226 HNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAF 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + + ++   E+++R      +    ++ N         F R+   +AI++Y
Sbjct: 284 SDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 335



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  E   + F +    K+  ++    +   Y RA + G+PP 
Sbjct: 412 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 471

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 472 GGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|189347081|ref|YP_001943610.1| lysyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|189341228|gb|ACD90631.1| lysyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 507

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 135/304 (44%), Gaps = 39/304 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +  +R  G   F  I+D  G  QV    D    ++ ++  + + L   G ++  
Sbjct: 63  VSVAGRIMTIRKMGKASFFHIQDSKGRIQVYLKKD----DVGETAYNTFKLLDIGDIVGV 118

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----------ESIRFKYR 129
              T      TG+I + A+  E+LS +   P+PV  E++             + +R++ R
Sbjct: 119 KGFTFRTK--TGEISVHAETFELLSKSLR-PIPVAKEKDIDGQKVVYDAFSDKELRYRQR 175

Query: 130 FLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL  +  + +  +KR+ I+  MR     + ++E  TPIL        AR F       
Sbjct: 176 YVDLIVNPEVRETFIKRSAIVTFMRQFFTGKGWLEVETPILQPIYGGAAARPFTTHHNAL 235

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDMEMSFVEQ 246
               Y L  A + Y + L+  GFD  F+ A  FR+E    DR    EF Q+++ +++ + 
Sbjct: 236 DMQLY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEG--IDRFHNPEFTQVELYVAYKDY 292

Query: 247 DDILNTMENVL-------RGVFEEFSNGNTVSNN--FLRICYDDAIRRY------GTDKP 291
           + ++  +E +L        G       GN +S    F R+   DAI+ Y      G ++ 
Sbjct: 293 NWMMELVEELLYRTTLSVNGTHTTSFLGNDISLEPPFRRLTIVDAIKEYCNVDVSGKNET 352

Query: 292 DLRN 295
           +LR+
Sbjct: 353 ELRS 356



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  GIDR+VML+ G +++R+V  FP
Sbjct: 466 RALEYGMPPCAGLGIGIDRVVMLITGQESIRDVIFFP 502


>gi|332362117|gb|EGJ39919.1| asparagine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 448

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAI 295



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++   + +G+  +  E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNELGM--DTSEYEFYLDLRKY--GTVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|327461251|gb|EGF07584.1| asparagine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 465

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+           A F+  K +
Sbjct: 32  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 91

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 92  SQETSVYVTGIVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 141

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 142 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 197

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 198 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 255

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 256 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDTELLKRYIAEPFKRVSYDEAI 312



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+  +  E  F    R +  G  PHGG   G
Sbjct: 381 LAPEGYGEIIGGSMREEDYDALVAKMEELGM--DTSEYEFYLDLRKY--GSVPHGGFGIG 436

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 437 IERMVTFVAGTKHIREAIPFP 457


>gi|49482744|ref|YP_039968.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|295427052|ref|ZP_06819689.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|56749426|sp|Q6GJF4|SYK_STAAR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|49240873|emb|CAG39540.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|295129055|gb|EFG58684.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16]
          Length = 495

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 130/285 (45%), Gaps = 19/285 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAK 63
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D      F++ K
Sbjct: 47  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 106

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
           +     ++ ++G++   +         TG++ + A+K  +L+ +   LP    G ++  +
Sbjct: 107 NADLGDIVGVEGVMFKTN---------TGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQ 157

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
             R++ R+LDL   +   +  + R++II  MR  +  + F+E  TP++   +    AR F
Sbjct: 158 --RYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPF 215

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +        + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++ 
Sbjct: 216 VTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELY 273

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            ++ +  DI++  E+++R +  E      V  N   I  + A  R
Sbjct: 274 EAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTR 318



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490


>gi|15923507|ref|NP_371041.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15926194|ref|NP_373727.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|57651394|ref|YP_185450.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|82750224|ref|YP_415965.1| lysyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87161440|ref|YP_493205.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194278|ref|YP_499070.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|156978845|ref|YP_001441104.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|221142291|ref|ZP_03566784.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253315214|ref|ZP_04838427.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|255005310|ref|ZP_05143911.2| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|262050002|ref|ZP_06022861.1| lysyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262052543|ref|ZP_06024740.1| lysyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269202138|ref|YP_003281407.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|284023526|ref|ZP_06377924.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294850378|ref|ZP_06791111.1| lysyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295407408|ref|ZP_06817205.1| lysyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296276170|ref|ZP_06858677.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297246488|ref|ZP_06930328.1| lysyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|54039675|sp|P67610|SYK_STAAN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|54042058|sp|P67609|SYK_STAAM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71153565|sp|Q5HIF7|SYK_STAAC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123098061|sp|Q2G0Q3|SYK_STAA8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123727449|sp|Q2YVW8|SYK_STAAB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123749646|sp|Q2FJC3|SYK_STAA3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166230591|sp|A7WYS8|SYK_STAA1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|13700407|dbj|BAB41705.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14246285|dbj|BAB56679.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|57285580|gb|AAW37674.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|82655755|emb|CAI80154.1| lysyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87127414|gb|ABD21928.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201836|gb|ABD29646.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|156720980|dbj|BAF77397.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|259159590|gb|EEW44637.1| lysyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259161937|gb|EEW46520.1| lysyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262074428|gb|ACY10401.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269940088|emb|CBI48464.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|283469809|emb|CAQ49020.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
 gi|285816216|gb|ADC36703.1| Lysyl-tRNA synthetase (class II) [Staphylococcus aureus 04-02981]
 gi|294822802|gb|EFG39238.1| lysyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294967765|gb|EFG43797.1| lysyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297176675|gb|EFH35937.1| lysyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|312829012|emb|CBX33854.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315128646|gb|EFT84649.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315193880|gb|EFU24274.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
 gi|315196201|gb|EFU26557.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
 gi|329313236|gb|AEB87649.1| Lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329725054|gb|EGG61549.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
 gi|329729791|gb|EGG66188.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
 gi|329731092|gb|EGG67464.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 495

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 130/285 (45%), Gaps = 19/285 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAK 63
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D      F++ K
Sbjct: 47  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 106

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
           +     ++ ++G++   +         TG++ + A+K  +L+ +   LP    G ++  +
Sbjct: 107 NADLGDIVGVEGVMFKTN---------TGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQ 157

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
             R++ R+LDL   +   +  + R++II  MR  +  + F+E  TP++   +    AR F
Sbjct: 158 --RYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPF 215

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +        + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++ 
Sbjct: 216 VTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELY 273

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            ++ +  DI++  E+++R +  E      V  N   I  + A  R
Sbjct: 274 EAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTR 318



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490


>gi|149197282|ref|ZP_01874334.1| lysyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149139828|gb|EDM28229.1| lysyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 492

 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 119/249 (47%), Gaps = 23/249 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCID 74
           G  +R++G V  VR  G  +F  I+D  G  Q+ A+    +   F   K +    ++ +D
Sbjct: 54  GQKLRVAGRVMTVRVMGKALFATIQDAEGRIQIYASRNEMEQLEFNRMKKMDIGDIIGVD 113

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
           G +     E I     T          ++LS A   LP    G ++     R++ R+LDL
Sbjct: 114 GELFKTKKEEITVRTAT---------YKVLSKALRPLPEKFHGLKDV--ETRYRQRYLDL 162

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP-SRVNQG 189
             +   + + + R  II++MR  +  ++++E  TP++    P GA  R F+   + ++Q 
Sbjct: 163 ISNEESRRVFRQRAAIISAMREYLEKDSYMEVETPMM-HPIPGGASARPFVTHYNALDQE 221

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            F  +  AP+ Y ++L+  GF+R F+I   FR+E       P EF  ++   ++ +   +
Sbjct: 222 MFMRI--APELYLKMLLVGGFERVFEINRNFRNEGVSKQHNP-EFTAIEAYQAYGDCSTM 278

Query: 250 LNTMENVLR 258
           ++ M+ ++R
Sbjct: 279 MDLMQGIIR 287



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 37/174 (21%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE-------KKID--------FAHNPF 459
           + R +IA+E+G         C IM     +W EEE       KKI+            P 
Sbjct: 336 EERANIAREMG---------CTIMP----DWTEEEITEEVYSKKIEPTLIQPTFVTKLPV 382

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR-----NHMSEVMLQAFSNVGIS 514
            M        +  +L+ +    ++LVC+G E+A G             +M Q     G  
Sbjct: 383 HMVPLAKRCSENPELVDV----FELVCDGKELAPGYSELNDPIEQRQRLMAQFERAKGTE 438

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           +E           A + GMPP GG+  G+DR+VM+L GA  +R+V LFP  +N 
Sbjct: 439 EEDSGRIDESFLTALEHGMPPAGGMGMGVDRLVMMLTGAPTIRDVILFPQLKNI 492


>gi|294788454|ref|ZP_06753697.1| lysine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294483885|gb|EFG31569.1| lysine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 504

 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 135/301 (44%), Gaps = 31/301 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  ++D  G  Q+  N      +I     + W +   G ++  
Sbjct: 68  VKIAGRMMLKRQMGKATFATVQDVSGSIQLYLNNKGVSQDILDDF-NHWDM---GDIIGA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           +      N   G++ +   +I +LS +   PLP   +    +  +++ R++DL  +   +
Sbjct: 124 TGTLFKTN--HGELTVRVSEIRLLSKSLR-PLPDKHKGLSDQETKYRQRYVDLIANAESR 180

Query: 141 -NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQA 197
              +KR++II S+R  M+ E ++E  TP++  S P G  A+ F+          Y L  A
Sbjct: 181 ETFIKRSQIIQSVRNFMVGEKYLEVETPMM-HSIPGGATAKPFVTHHNALDIPLY-LRIA 238

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F + + ++   E+++
Sbjct: 239 PELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAFSDYNRMMQMAEDII 297

Query: 258 RGVFEEFSNGN----------TVSNNFLRICYDDAIRRYGTDKPD--------LRNPIIM 299
           R   +  ++G+           + + F R+    AI++Y     D        L+  I+ 
Sbjct: 298 RNACKTVNSGSLKIEYNGKEVDLESPFERLTILQAIKKYNPQYTDEQLNDAEWLKKEIVK 357

Query: 300 H 300
           H
Sbjct: 358 H 358



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  A+ +R+V LFP
Sbjct: 463 RAMEFGLPPTGGCGIGIDRLVMLLTNAQTIRDVILFP 499


>gi|313892212|ref|ZP_07825805.1| lysine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119350|gb|EFR42549.1| lysine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 503

 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 22/262 (8%)

Query: 6   THSCGDL-----GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           TH   D+      + + G  VR++G +  +R HG   F  +RD     Q+    D     
Sbjct: 38  THRAADVLENAQALEESGEHVRIAGRLMLIRDHGKTAFAVLRDDRSDIQLYFRKDELT-- 95

Query: 61  IAKSVRSEWVL--CID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
                 +EW L   +D G ++         +  TG+  +      IL+     P+P    
Sbjct: 96  -----ENEWALYKLLDMGDIIGVEGTVFKTH--TGETTIRVSTYTILTKTLR-PMPEKWH 147

Query: 118 REYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
               +  R++ R++DL     +    +KRT+++N++R       F+E  TP+L       
Sbjct: 148 GLTDKEQRYRMRYVDLICNPQVKDTFIKRTKMLNAIRKWYTDHGFLEVETPVLQPLYGGA 207

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+        + Y L  AP+ Y + L+  G DR F+I   FR+E   +   P EF 
Sbjct: 208 NARPFVTHLNAMDMTMY-LRIAPELYLKRLVVGGIDRVFEITRNFRNEGMDAKHNP-EFT 265

Query: 236 QLDMEMSFVEQDDILNTMENVL 257
            ++   ++ + +D ++  E ++
Sbjct: 266 AMESYQAYGDIEDAIHQTEEIV 287



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           R+ + GMPP GG+  G+DR+ ML+ G+ ++R+V  FP
Sbjct: 449 RSLEYGMPPTGGLGIGLDRLFMLMTGSHSIRDVIFFP 485


>gi|319648606|ref|ZP_08002820.1| lysyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|317389373|gb|EFV70186.1| lysyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 500

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 29/283 (10%)

Query: 5   RTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RTH   DL +     F           V ++G +   R  G   F  I+D  G  Q+   
Sbjct: 40  RTHQSTDL-IESYNEFSKEELEEKAIEVTIAGRMMTKRGKGKAGFAHIQDLKGQIQIYVR 98

Query: 54  PDSACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELP 111
            DS   E     + EW    D G ++  +      N+  G++ + A   ++L+ A   LP
Sbjct: 99  KDSVGEE-----QYEWFKSSDLGDIVGVTGVMFKTNV--GELSVKATSFDLLTKALRPLP 151

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILT 170
               G ++  +  R++ R+LDL  +   KN  + R++II SMR  +    ++E  TP + 
Sbjct: 152 DKYHGLKDIEQ--RYRQRYLDLIVNPESKNTFITRSKIIQSMRRYLDDHGYLEVETPTMH 209

Query: 171 ASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           A  P GA  R F+          Y +  A + + + L+  G ++ ++I   FR+E   + 
Sbjct: 210 AI-PGGASARPFITHHNALDMPLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTR 267

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
             P EF  +++  ++ +  DI+   EN++  + +E     TV 
Sbjct: 268 HNP-EFTMIELYEAYADYKDIMRLTENLIAHIAQEVLGTTTVQ 309



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++MLL  + ++R+V LFP
Sbjct: 460 ALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLFP 495


>gi|297624001|ref|YP_003705435.1| asparaginyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165181|gb|ADI14892.1| asparaginyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 436

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 119/288 (41%), Gaps = 31/288 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           +G  V L GWV   R  G I FL +RD  G  Q V   ++ D A F +A+ +  E  + +
Sbjct: 17  IGETVTLEGWVAGSRSSGKIAFLRLRDGSGFVQGVIAKSDVDEATFALARKLTQESSVRV 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V  R+ E   +      +EL    + ++  A E P+     + +      ++R L L
Sbjct: 77  TGAV--RADERAPSG-----VELGVTGLALVHEATEYPI---TPKAHGVDFLMEHRHLYL 126

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  ++ ++        F+    P+ T ++ EG  +        +   Y 
Sbjct: 127 RHPKPWAVMRIRDELVRAVHDFFAERGFLRFDAPVFTPNAAEGTTNLFEIDLFGEDKAY- 185

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-------Q 246
           L Q+ Q Y +   A    + +   P FR E  ++ +   EF+ ++ E++++E       Q
Sbjct: 186 LSQSGQLYAE-AGALALGKVYTFGPTFRAEKSKTRKHLLEFWMVEPEVAYLEHEGNVKLQ 244

Query: 247 DDI--------LNTMENVLRGVFEEFSNGN-TVSNNFLRICYDDAIRR 285
           +D         L T    L  +  + S    +   NF R+ YD+A+ +
Sbjct: 245 EDFVAYLVGRTLETRRTELEILERDVSRLEPSAQGNFPRLSYDEALAK 292


>gi|183221280|ref|YP_001839276.1| lysyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911371|ref|YP_001962926.1| lysyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167776047|gb|ABZ94348.1| Lysine--tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167779702|gb|ABZ98000.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase; LysRS) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 497

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 21/280 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVR-SEWVLCIDGLV 77
           +L G +H  R  G   F  ++D  G+ Q+ A  D      + + KS+   +W+     L 
Sbjct: 57  KLGGRLHAKRVMGKASFAHLKDAEGLIQLYATRDDLGEENYSLFKSLDLGDWIGIEGWLF 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RD 136
            ++  ET    +    ++L A+ I  L V +E    ++      E  R++ R++DL   +
Sbjct: 117 QTQKGET---TLHLTNVQLLAKCIRPLPVVKEKDGVIYDAFSDVEQ-RYRMRYVDLVVNE 172

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
            + +    R+RII+ +R  +  E F+E  TP++   +    AR F+          + L 
Sbjct: 173 NVRETFKMRSRIISEIRKFLTNEGFLEVETPMMQPIAGGAAARPFVTHHNTLDMELF-LR 231

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G DR F++   FR+E   +   P EF  ++  M+F + + +L+  E 
Sbjct: 232 IAPELYLKRLIVGGMDRVFELNRNFRNEGISTKHNP-EFTMMEAYMAFGDMEAMLSLTER 290

Query: 256 VLRGVFEEFSNGNT---------VSNNFLRICYDDAIRRY 286
           ++  V      G           ++  + R+ Y D I+ Y
Sbjct: 291 MIVSVATAIGKGLKFPYGKDQIDLTPPWKRVKYIDIIKDY 330



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + G+PP GG+  GIDR+VMLL  + ++R+  LFP+
Sbjct: 456 RALEYGLPPTGGLGIGIDRLVMLLTDSHSIRDTILFPL 493


>gi|52078577|ref|YP_077368.1| lysyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52783938|ref|YP_089767.1| lysyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52001788|gb|AAU21730.1| lysyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52346440|gb|AAU39074.1| LysS [Bacillus licheniformis ATCC 14580]
          Length = 499

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 29/283 (10%)

Query: 5   RTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RTH   DL +     F           V ++G +   R  G   F  I+D  G  Q+   
Sbjct: 39  RTHQSTDL-IESYNEFSKEELEEKAIEVTIAGRMMTKRGKGKAGFAHIQDLKGQIQIYVR 97

Query: 54  PDSACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELP 111
            DS   E     + EW    D G ++  +      N+  G++ + A   ++L+ A   LP
Sbjct: 98  KDSVGEE-----QYEWFKSSDLGDIVGVTGVMFKTNV--GELSVKATSFDLLTKALRPLP 150

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILT 170
               G ++  +  R++ R+LDL  +   KN  + R++II SMR  +    ++E  TP + 
Sbjct: 151 DKYHGLKDIEQ--RYRQRYLDLIVNPESKNTFITRSKIIQSMRRYLDDHGYLEVETPTMH 208

Query: 171 ASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           A  P GA  R F+          Y +  A + + + L+  G ++ ++I   FR+E   + 
Sbjct: 209 AI-PGGASARPFITHHNALDMPLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTR 266

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
             P EF  +++  ++ +  DI+   EN++  + +E     TV 
Sbjct: 267 HNP-EFTMIELYEAYADYKDIMRLTENLIAHIAQEVLGTTTVQ 308



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++MLL  + ++R+V LFP
Sbjct: 459 ALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLFP 494


>gi|225850960|ref|YP_002731194.1| lysyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225645229|gb|ACO03415.1| lysyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 579

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 134/283 (47%), Gaps = 22/283 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  I+D  G  Q+    D+   E  K   +  +L I  +V   
Sbjct: 142 VSVAGRIVSFRDQGKAAFGHIQDADGKIQIYFRRDTLGDE--KYNEAMEILDIGDIV--- 196

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
             E      +TG++ +  +  ++L+ +   LP    G ++    +R++ R++DL  +   
Sbjct: 197 GVEGELFRTMTGELTVEVKDFKLLTKSLRALPEKWHGLKDV--ELRYRRRYVDLIANPKA 254

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           + I K R + I S+R  + +E F+E  TPIL + +S   AR F+          Y L  A
Sbjct: 255 REIFKIRYKAIKSLREFLESEGFMEVETPILQSVASGAMARPFITHHNALDIDMY-LRIA 313

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y ++L+  GF+R +++   FR+E   +   P EF  ++   ++++ +D+++  E ++
Sbjct: 314 PELYLKMLIVGGFNRVYELGRNFRNEGIDTTHNP-EFTMVEFYAAYMDYNDLMDLTERLM 372

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIR-RYGTDK 290
           R +  +      +         S  F R+ + DA++ + G DK
Sbjct: 373 RKILMDTVGKLKITWEGQELDFSKPFRRLRFFDALKEKTGKDK 415



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 16/152 (10%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKK-----IDFAHNPFTMPQGGMESLKGNDLL 475
           A+E+GI          I+D  F  + EE+       IDF   P  +           DL+
Sbjct: 428 AKEVGIPKAETLTHLKILDKLFEHFIEEDLVQPTFVIDF---PKILSPLAKTHRDDPDLV 484

Query: 476 SIKAFQYDLVCNGFEIASGGIR----NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
                +++L+ N  EIA+            E  LQ         E   +       A + 
Sbjct: 485 E----RFELIVNKQEIANAYTELNDPEDQRERFLQQLKEKAAGDEEAMDIDENFLTALEY 540

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP GG   GIDR+VM+L  + ++REV LFP
Sbjct: 541 GLPPTGGEGIGIDRLVMMLTDSPSIREVILFP 572


>gi|153822306|ref|ZP_01974973.1| lysyl-tRNA synthetase [Vibrio cholerae B33]
 gi|126520202|gb|EAZ77425.1| lysyl-tRNA synthetase [Vibrio cholerae B33]
          Length = 469

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 106/215 (49%), Gaps = 16/215 (7%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150
           G + ++ ++ ++L+ A   PLP        + +R++ R++DL  +   +N  + R+++++
Sbjct: 133 GDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMS 191

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 192 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V  E     
Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGST 308

Query: 269 TV---------SNNFLRICYDDAIRRYGTDKPDLR 294
           ++            + R+   DAI+ Y  +   ++
Sbjct: 309 SMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQ 343


>gi|311244570|ref|XP_003121503.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like [Sus
           scrofa]
          Length = 559

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 114/289 (39%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 136 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 182

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 183 VLSTESSVAVYGMLKLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 242

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ I    R       + E + P L  +  EG           
Sbjct: 243 NRHMMIRGENMSKILKARSVITRCFREHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 302

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + ++  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  +
Sbjct: 303 EEAY--LTQSSQLYLETCIPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFE 359

Query: 248 DILNTMENVLRGVFEEFSNGNTV-------------SNNFLRICYDDAI 283
           ++LN +E+++  V E     +                  F R+ Y DAI
Sbjct: 360 ELLNRLEDLVCDVVERVMKSSAAGIVRELNPNFKPPKRPFRRMNYSDAI 408


>gi|302538179|ref|ZP_07290521.1| lysyl-tRNA synthetase [Streptomyces sp. C]
 gi|302447074|gb|EFL18890.1| lysyl-tRNA synthetase [Streptomyces sp. C]
          Length = 1100

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 117/271 (43%), Gaps = 28/271 (10%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTH+   L  +          G  V L+G V  VR  GG++F  +RD  G  Q++   D 
Sbjct: 637 RTHTAAALRAAHPGRTPGARTGERVTLAGRVMVVRDLGGVVFAVLRDWTGDAQLMFTRDE 696

Query: 57  ACFEIAKSVRSE-----WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
           +  ++  +  S+      V+    +  SRS E    +++ G  +L+ + +         P
Sbjct: 697 SGPDVLDAFTSQVDFGDHVVATGEVGASRSGEP---SVVVGSWQLTGKCLR--------P 745

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT 170
           LP   +       R + R+LDL      +++V+ R+  + ++R  ++   ++E  TP+L 
Sbjct: 746 LPDKRKGLADPEARVRRRYLDLVASPDARDVVRARSSAVQALRQGLLDRGYLEVETPMLQ 805

Query: 171 A-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  AR F           Y L  AP+ Y + L   G ++ F++   FR+E      
Sbjct: 806 QIHGGANARPFRTHINAYDLDLY-LRIAPELYLKRLCVGGMEKVFEMGRTFRNEGVSYKH 864

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            P EF  L+   +F + D +L+    +++G 
Sbjct: 865 NP-EFTMLEAYQAFADYDVMLDLTRELIQGA 894



 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 11/96 (11%)

Query: 479  AFQYDLVCNGFEIASGGIR-----NHMSEVMLQAFSNVGISKEVVE--NRFGGLYRAFQC 531
            A ++DLV  G E+ +              +  Q+    G   E +E  N F     A + 
Sbjct: 1008 AERWDLVAFGTELGTAYSELTDPIEQRRRLTAQSLLAAGGDAEAMELDNDF---LDALEY 1064

Query: 532  GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             MPP GG+  G+DR+VM L G   +RE   FP+ + 
Sbjct: 1065 AMPPTGGLGIGVDRLVMFLTGL-TIRETLPFPLVRQ 1099


>gi|94988159|ref|YP_596260.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94992046|ref|YP_600145.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|123257805|sp|Q1JCQ7|SYN_STRPB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123258209|sp|Q1JMN3|SYN_STRPC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|94541667|gb|ABF31716.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94545554|gb|ABF35601.1| Asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 448

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---------NPDSAC--FEIAKSV 65
           VG  V +  WV      G I F+ +RD     Q VA           +S    F++ K +
Sbjct: 15  VGQEVTIGAWVTNKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +EI+  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKFG-------YELDITDLEIIGESHEYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYATYEFFDQNGFIKFDSPILSENAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGKPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYITEPFKRVSYDDAI 295



 Score = 40.4 bits (93), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ K   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDNYDALVAKMDELGMDKS--EYDFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|71895483|ref|NP_001025754.1| lysyl-tRNA synthetase [Gallus gallus]
 gi|53130732|emb|CAG31695.1| hypothetical protein RCJMB04_9m1 [Gallus gallus]
          Length = 590

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 27/281 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP----- 54
           + RY     GD  ++D+   V ++G +H  R  GG +IF D+R      QV+AN      
Sbjct: 106 IERYSHLQPGD-HLTDIT--VSVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRLYKS 162

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLP 113
           +   F I   +R   ++ + G                G++ +   +I +LS     LP  
Sbjct: 163 EEEYFRINNKLRRGDIIGVVG---------NPGKTKKGELSIIPYEITLLSPCLHMLPHL 213

Query: 114 VFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
            FG ++  +  R++ R+LDL   D + +  + R +I+  +R  +    F+E  TP++   
Sbjct: 214 HFGLKD--KETRYRQRYLDLILNDYVRQKFITRAKIVTYIRSFLDELGFLEIETPMMNII 271

Query: 173 SPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            P GA  + F+          Y +  AP+ Y ++L+  G DR ++I   FR+E       
Sbjct: 272 -PGGAMAKPFITYHNELDMKLY-MRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHN 329

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           P EF   +  M++ +  D++   E +L G+ +  +    ++
Sbjct: 330 P-EFTTCEFYMAYADYRDLMEITEKLLSGMVKHITGSYKIT 369



 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR  M L  + N++EV LFP
Sbjct: 533 ALEYGLPPTAGWGMGIDRFTMFLTDSSNIKEVLLFP 568


>gi|30022634|ref|NP_834265.1| asparaginyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206969927|ref|ZP_03230881.1| asparaginyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228923302|ref|ZP_04086590.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228954827|ref|ZP_04116847.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228960827|ref|ZP_04122462.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229048266|ref|ZP_04193834.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229072060|ref|ZP_04205269.1| Asparaginyl-tRNA synthetase [Bacillus cereus F65185]
 gi|229081811|ref|ZP_04214303.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229129842|ref|ZP_04258808.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229147117|ref|ZP_04275476.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229180877|ref|ZP_04308212.1| Asparaginyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|229192759|ref|ZP_04319717.1| Asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|296505034|ref|YP_003666734.1| asparaginyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|38258297|sp|Q817I8|SYN_BACCR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|29898192|gb|AAP11466.1| Asparaginyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206735615|gb|EDZ52783.1| asparaginyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228590598|gb|EEK48459.1| Asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228602434|gb|EEK59920.1| Asparaginyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228636366|gb|EEK92837.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228653533|gb|EEL09405.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228701399|gb|EEL53893.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228710994|gb|EEL62960.1| Asparaginyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228722991|gb|EEL74368.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228798849|gb|EEM45828.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228804816|gb|EEM51415.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228836256|gb|EEM81609.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296326086|gb|ADH09014.1| asparaginyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 463

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 127/323 (39%), Gaps = 61/323 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V     ++
Sbjct: 21  VQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSSVKVEGKVI 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A+KI+I  +++    P+  +R   E +R       LR  T
Sbjct: 81  ATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHLRPRT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              +   R R I +       +   F+   TPI+T S  EGA +     RV       LP
Sbjct: 129 NAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDLNNLP 185

Query: 196 QAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           +                       Q      A  F   +   P FR E+  + R   EF+
Sbjct: 186 KGEDGKVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFW 245

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNF 274
            ++ E++F E  D++N  E++L+   +          EF N            N ++++F
Sbjct: 246 MVEPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDF 305

Query: 275 LRICYDDAIRRYGTDKPDLRNPI 297
            RI Y +AI+       D + P+
Sbjct: 306 GRITYTEAIKVLQESGADFKYPV 328


>gi|298693848|gb|ADI97070.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 495

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 130/285 (45%), Gaps = 19/285 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAK 63
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D      F++ K
Sbjct: 47  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 106

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
           +     ++ ++G++   +         TG++ + A+K  +L+ +   LP    G ++  +
Sbjct: 107 NADLGDIVGVEGVMFKTN---------TGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQ 157

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
             R++ R+LDL   +   +  + R++II  MR  +  + F+E  TP++   +    AR F
Sbjct: 158 --RYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPF 215

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +        + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++ 
Sbjct: 216 VTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELY 273

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            ++ +  DI++  E+++R +  E      V  N   I  + A  R
Sbjct: 274 EAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTR 318



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490


>gi|21282201|ref|NP_645289.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49485381|ref|YP_042602.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|38258393|sp|Q8NXZ0|SYK_STAAW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|56749397|sp|Q6GBX1|SYK_STAAS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|21203637|dbj|BAB94337.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49243824|emb|CAG42249.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476]
          Length = 495

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 130/285 (45%), Gaps = 19/285 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAK 63
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D      F++ K
Sbjct: 47  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 106

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
           +     ++ ++G++   +         TG++ + A+K  +L+ +   LP    G ++  +
Sbjct: 107 NADLGDIVGVEGVMFKTN---------TGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQ 157

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
             R++ R+LDL   +   +  + R++II  MR  +  + F+E  TP++   +    AR F
Sbjct: 158 --RYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPF 215

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +        + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++ 
Sbjct: 216 VTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELY 273

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            ++ +  DI++  E+++R +  E      V  N   I  + A  R
Sbjct: 274 EAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTR 318



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490


>gi|15674719|ref|NP_268893.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|19745748|ref|NP_606884.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|21909997|ref|NP_664265.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28896306|ref|NP_802656.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|56808340|ref|ZP_00366099.1| COG0017: Aspartyl/asparaginyl-tRNA synthetases [Streptococcus
           pyogenes M49 591]
 gi|71903182|ref|YP_279985.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|71910351|ref|YP_281901.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|94990041|ref|YP_598141.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|139474151|ref|YP_001128867.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|306827725|ref|ZP_07460997.1| asparagine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|54039685|sp|P67576|SYN_STRP3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|54039686|sp|P67577|SYN_STRP8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|54042046|sp|P67575|SYN_STRP1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|122987033|sp|Q1JHS6|SYN_STRPD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123734117|sp|Q48UH6|SYN_STRPM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166232739|sp|A2RFM5|SYN_STRPG RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|13621841|gb|AAK33614.1| putative asparaginyl-tRNA synthetase [Streptococcus pyogenes M1
           GAS]
 gi|19747888|gb|AAL97383.1| putative asparaginyl-tRNA synthetase [Streptococcus pyogenes
           MGAS8232]
 gi|21904186|gb|AAM79068.1| putative asparaginyl-tRNA synthetase [Streptococcus pyogenes
           MGAS315]
 gi|28811557|dbj|BAC64489.1| putative asparaginyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|71802277|gb|AAX71630.1| hypothetical protein M28_Spy0516 [Streptococcus pyogenes MGAS6180]
 gi|71853133|gb|AAZ51156.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|94543549|gb|ABF33597.1| Asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|134272398|emb|CAM30654.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|304430043|gb|EFM33080.1| asparagine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 448

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---------NPDSAC--FEIAKSV 65
           VG  V +  WV      G I F+ +RD     Q VA           +S    F++ K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +EI+  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKFG-------YELDITDLEIIGESHEYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYATYEFFDQNGFIKFDSPILSENAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGKPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYITEPFKRVSYDDAI 295



 Score = 40.4 bits (93), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ K   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDNYDALVAKMDELGMDKS--EYDFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|312144280|ref|YP_003995726.1| lysyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904931|gb|ADQ15372.1| lysyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 491

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 127/282 (45%), Gaps = 28/282 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V+L+G +  +R HG   F D+ D     Q+    ++     +E  +++    ++ I G V
Sbjct: 54  VKLAGRLMAIRTHGKASFADLMDMTSKVQLYIKQNNVGEDRYEFFQNLDLGDIIGITGTV 113

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
                         G++ ++    E+L+ A   LP    G ++  + IR++ R+LDL  +
Sbjct: 114 FKTRR---------GEVSINVSSFELLTKALRPLPEKFHGLKD--KDIRYRQRYLDLIVN 162

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
             + +  V R++II  MR  +  + F+E  TP++   +    AR F+          Y L
Sbjct: 163 PDVKETFVIRSKIIREMRNFLEEKGFLEVETPMMHPIAGGATARPFVTHHNTLDMDLY-L 221

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF++ F+I   FR+E       P EF  L++  +  +  D++   E
Sbjct: 222 RIAPELYLKRLIVGGFEKVFEINRNFRNEGMSYKHNP-EFTTLELYQAQADYHDMMELTE 280

Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
           N++  + ++  +   V         +  + RI   +A++ Y 
Sbjct: 281 NLIYSLSKKVLDKTVVEYEGTELDLTTPWRRITMVEAVKEYA 322



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR++MLL  + ++R+V LFP
Sbjct: 447 RALEYGMPPTGGLGIGIDRLIMLLTDSSSIRDVILFP 483


>gi|237807750|ref|YP_002892190.1| lysyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259511537|sp|C4LCP0|SYK_TOLAT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|237500011|gb|ACQ92604.1| lysyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 513

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 26/287 (9%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           +V+++G +   R  G   F  ++D  G  Q+    D            +W L   G ++ 
Sbjct: 69  YVKIAGRIMTRRIMGKASFATLQDMGGKIQIYVTRDDLPEGFYNEQFKKWDL---GDIVG 125

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                   N  TG++ +    I +L+ A   PLP   +    +  R + R+LDL  +   
Sbjct: 126 VEGYMFRTN--TGELSVHTTSIRLLTKALR-PLPEKHKGLTDQEARCRQRYLDLIANEES 182

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQ 196
           +   + R +++N +R  + ++NF+E  TP++    P GA  R F+          Y L  
Sbjct: 183 RRTFQIRNQVMNGIRNFLNSKNFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY-LRI 240

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R +++   FR+E   S R   EF  L+  M++ + +D+++  E +
Sbjct: 241 APELYLKRLVVGGFERVYEVNRNFRNEGI-SVRHNPEFTMLEFYMAYADYNDLMDLTEEM 299

Query: 257 LRGVFEEFSNGNTV--------------SNNFLRICYDDAIRRYGTD 289
           LR + +       +                 F R+   ++I +YG D
Sbjct: 300 LRTLAQNIHGTTKIRYAKDGEEGIEIDFGQPFARMTMVESILKYGND 346



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++    G EIA+G    + +E   + F      KE  ++           A + G+PP 
Sbjct: 420 RFEFFIGGREIANGFSELNDAEDQAERFQAQVAQKEAGDDEAMFYDADFVTALEHGLPPT 479

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML   +  +R+V LFP
Sbjct: 480 AGQGIGIDRLVMLFTNSHTIRDVILFP 506


>gi|254497461|ref|ZP_05110254.1| lysine tRNA synthetase, heat inducible [Legionella drancourtii
           LLAP12]
 gi|254353276|gb|EET12018.1| lysine tRNA synthetase, heat inducible [Legionella drancourtii
           LLAP12]
          Length = 497

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 29/279 (10%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           ++G +   R  G   F  I+D  G  Q+   AN     +E  K     W L   G ++  
Sbjct: 66  VAGRIVLRRIMGKASFFHIQDVSGRIQIYIRANDLPELYEQFKH----WDL---GDIVGV 118

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
           S E    N  TG++ L+A+ IE+L+ +   PLP        + ++++ R++DL   +   
Sbjct: 119 SGELFKTN--TGELTLNAEHIELLTKSLR-PLPDKFHGLADQEVKYRKRYVDLIANEDSR 175

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
              + R+R+I + R  M    F+E  TP++    P GA  R F+        + Y L  A
Sbjct: 176 TTFLIRSRLIQAFRQFMDKNQFLEVETPMM-HPIPGGAVARPFITHHNSLDMTMY-LRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG----EFYQLDME----MSFVEQDDI 249
           P+ Y + L+  GF+R ++I   FR+E   +   P     EFYQ   +    M+F EQ  +
Sbjct: 234 PELYLKRLVVGGFERVYEINRNFRNEGISTRHNPEFTMVEFYQAYADYNDLMTFTEQ--L 291

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIRRY 286
           L  + +V+ G  +    G ++  N  F R+   +AI  Y
Sbjct: 292 LQYLCDVVLGTRQVEYQGQSIDFNQPFTRMTVKEAILHY 330



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 14/92 (15%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---------YRAFQC 531
           +++    G EIA+G    + +E   + F      K+V E   G L           A + 
Sbjct: 407 RFEFFIAGREIANGFSELNDAEDQAERFR-----KQVEEKDAGDLEAMHYDSDYIEALEY 461

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP  G   GIDR+VML   ++++R+V LFP
Sbjct: 462 GLPPTAGEGIGIDRLVMLFTNSQSIRDVILFP 493


>gi|195580101|ref|XP_002079894.1| GD21774 [Drosophila simulans]
 gi|194191903|gb|EDX05479.1| GD21774 [Drosophila simulans]
          Length = 558

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/295 (21%), Positives = 115/295 (38%), Gaps = 39/295 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G ++  S V++ GWVHR+R  G  +IF+ +RD  G  Q V N D  C             
Sbjct: 130 GTANRDSRVKVYGWVHRLRRQGKSLIFITLRDGTGFLQCVLN-DQLC------------Q 176

Query: 72  CIDGLVMSRSAETI---------NANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             D L +S  +  +               G  EL+    E++  A           E   
Sbjct: 177 TYDALTLSTESSVVLFGTLKLVPEGKTAPGGHELNVDYWELIGPAPPGGADAILNEEAQP 236

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++   R + +R +   K +  R+ +  + R    A  + E + P L  +  EG      
Sbjct: 237 DVQLDNRHIMIRGENTSKVLKMRSVVTQAFRAHYEARGYNEVTPPTLVQTQVEGGSTLFK 296

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                + ++  L Q+ Q Y +  + +  D  F I+  +R E  R+ R   E+  ++ E  
Sbjct: 297 LKYFGEEAY--LTQSSQLYLETCLPALGD-VFTISQSYRAEQSRTRRHLAEYSHVEAECP 353

Query: 243 FVEQDDILNTMENVLRGVFEEFSNG-------------NTVSNNFLRICYDDAIR 284
           F+  D++L+ +E+++  V +                        F R+ Y+DAI+
Sbjct: 354 FLTFDELLDRLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRRMNYEDAIK 408



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 12/90 (13%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGI 539
           L+ N  EI  G +R + SE +L+ ++  GI  +      + R  G          PHGG 
Sbjct: 475 LLPNVGEIVGGSMRIYDSEELLKGYAREGIDPQPYYWYTDQRVYGTM--------PHGGY 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G++R +  LL   ++REV L+P   + C
Sbjct: 527 GLGLERFLCWLLNRYHIREVCLYPRFLDRC 556


>gi|283835351|ref|ZP_06355092.1| lysine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291068516|gb|EFE06625.1| lysine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 505

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 128/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I+  +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQIMAGIRQFMVGRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295
            + +      E   G  V      F ++   +AI++Y   T+  DL N
Sbjct: 300 TLAQNVLGTTEVPYGEEVFDFGKPFEKLTMREAIQKYRPETNMADLDN 347



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|317126822|ref|YP_004093104.1| lysyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315471770|gb|ADU28373.1| lysyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 499

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 89/383 (23%), Positives = 157/383 (40%), Gaps = 57/383 (14%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTHS  DL                  V L+G V   R  G   F  I+D  G  Q+    
Sbjct: 35  RTHSAQDLKELYEEESKEELEEKAIEVTLAGRVMTKRGKGKAGFAHIQDLTGQIQLYVRK 94

Query: 55  DSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EEL 110
           D      ++I   +    ++ + G V              G++ +  +  +IL+ A   L
Sbjct: 95  DQVGEDQYDIFNRIDIGDLVGVTGEVFKTKV---------GELSIKVKDFQILTKALRPL 145

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           P    G ++  +  R++ R++DL  +  + +  + R++I+ SMR  +  + ++E  TP +
Sbjct: 146 PDKYHGLKDVEQ--RYRQRYVDLIVNPEVRETFILRSKILQSMRRYLDNQGYLEVETPTM 203

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            A +    AR F+        + Y +  A + + + L+  G ++ ++I   FR+E   + 
Sbjct: 204 HAIAGGASARPFVTHHNALDMTLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTR 262

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICY 279
             P EF  +++  ++ + +DI+   EN++  + EE     TV+ N         + R+  
Sbjct: 263 HNP-EFTMIELYEAYADYNDIMELTENLIAHIAEEVLGTTTVNYNGVDVDLKPRWKRVHM 321

Query: 280 DDAIRRY-GTD------KPDLRNPIIMHNVT-------EHFVHSEFRVFSKILSVNP--- 322
            DAI+ Y G D        + R     HNV         H V+  F  F +   V P   
Sbjct: 322 VDAIKEYTGVDFWEEMTDEEARALAKEHNVPVKDTMKYGHVVNEFFETFVEEKLVQPTFI 381

Query: 323 -GYEVWAIP-AKGGGGNRAFCDR 343
            G+ V   P AK    +  F DR
Sbjct: 382 YGHPVDISPLAKKNADDERFTDR 404



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  ++++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTNSQSIRDVLLFP 490


>gi|229525317|ref|ZP_04414722.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae bv. albensis
           VL426]
 gi|229338898|gb|EEO03915.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae bv. albensis
           VL426]
          Length = 510

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 16/207 (7%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150
           G + ++ ++ ++L+ A   PLP        + +R++ R++DL  +   +N  + R+++++
Sbjct: 133 GDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMS 191

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 192 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V  E     
Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGST 308

Query: 269 TV---------SNNFLRICYDDAIRRY 286
           ++            + R+   DAI+ Y
Sbjct: 309 SMPYGEHTVEFGGKYARMSMFDAIKHY 335



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 469 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504


>gi|227540939|ref|ZP_03970988.1| lysyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227183199|gb|EEI64171.1| lysyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 514

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 9/215 (4%)

Query: 60  EIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           E+ +     W   +D G ++S +   I++    G++ + A   ++ S A   PLPV   +
Sbjct: 109 EVGEESLKNWKADVDLGDIISVTGRVISSK--RGELSVMATDWQMASKALR-PLPV-AHK 164

Query: 119 EYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
           E  E  R ++R+ DL  R+   KN + R +++ ++R  + +E F+E  TP+L T      
Sbjct: 165 EMSEDQRIRHRYTDLIMREEARKNALTRIKVMRALRNFLESEGFLEVETPMLQTLHGGAA 224

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+  S       Y L  AP+ + +  +  G +R F++   FR+E   S   P EF  
Sbjct: 225 ARPFVTHSNAMDMDLY-LRIAPELFLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFAM 282

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           L+   ++ + +   + ++ +++ V  E     TV+
Sbjct: 283 LETYQAWGDYNTGADLIKRLIQSVATEVFGSTTVT 317



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSN-----VGISKEVVENRFGGLYRAFQCGMPP 535
           ++DL   GFE+A+G        +  + F +      G   E +E     L+ A +  MPP
Sbjct: 424 KWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMELDEDFLF-AMEQAMPP 482

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             G   GIDR++M L G   +RE  LFP+
Sbjct: 483 TSGNGMGIDRLLMALTGL-GIRETVLFPI 510


>gi|328860147|gb|EGG09254.1| hypothetical protein MELLADRAFT_34607 [Melampsora larici-populina
           98AG31]
          Length = 432

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 140/330 (42%), Gaps = 45/330 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHY--GITQVVANP-DSACFEIAKSVRSEWVLCIDGLV 77
           +++ GWV  +R    I FL++ D       Q++ NP  S   +   S++      I  LV
Sbjct: 1   IKVQGWVKSIRNQKSISFLELVDGSCSNHLQIILNPHQSHGIQTGSSLK-----VIGKLV 55

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RD 136
            S+         I    EL   +IE++        P+   ++   S+ F  + L LR R 
Sbjct: 56  KSKG--------IQQGKELKCDEIEVVGKCSADLYPL---QKKDHSLGFLRQHLHLRTRT 104

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL----------VPSR 185
            L  ++++ R+R+ +     + + +F +   P+++ +  EGA +            V   
Sbjct: 105 GLMSSVLRLRSRMSDQASSYLNSLDFFKTDPPMISFNDCEGAGEVFRIQTDQPSTQVSKN 164

Query: 186 VNQGSFYALPQAPQQYKQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           V+   F+  P       QL +   A G  R + + PCFR E  +++R   EF+ L++E+S
Sbjct: 165 VDDLEFFNQPAYLSVSSQLYLEAFAHGLGRVYTLGPCFRAESSQTNRHLAEFWMLEVEVS 224

Query: 243 FVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK----PDLRNPI 297
           F E+ ++++  +E +++ +      G  VS+    +     + +  +DK       R P 
Sbjct: 225 FCEELEEMMRLVERLIKFI------GLEVSDELESVWKSQGLEKKKSDKIKEELQTRCPR 278

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           I +   E  V +         S+   +E W
Sbjct: 279 ISYKEEEDVVGNRLSKVEWGDSLGSEHEKW 308



 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 12/110 (10%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISK 515
            PF M       LK +D  ++  F  DL+  G  E+  G +R    E + +     G+  
Sbjct: 328 KPFYM-------LKNSDQQTVACF--DLIVPGIGELVGGSLREFNEERLRENVEEKGM-- 376

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           + ++ +    +   + G  PH G   G DR+V  + G +NVREV  FP +
Sbjct: 377 DGMDGKLDWYFDLRRFGTNPHAGFGIGWDRLVCWISGIENVREVIGFPRT 426


>gi|322372640|ref|ZP_08047176.1| lysine--tRNA ligase [Streptococcus sp. C150]
 gi|321277682|gb|EFX54751.1| lysine--tRNA ligase [Streptococcus sp. C150]
          Length = 496

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 19/251 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + ++     ++G +   R  G + F  I+D  G  Q+    D+     ++I K       
Sbjct: 56  LHEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRKDAVGEENYDIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLSDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   RD+  +  V R++II+ +R  + A+ F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRDSFDR-FVTRSKIISEIRRYLDAQGFLEVETPVLHNEAGGAAAKPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFH 282

Query: 248 DILNTMENVLR 258
           DI+N  E +++
Sbjct: 283 DIMNLTEGIIQ 293



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|218295031|ref|ZP_03495867.1| asparaginyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244234|gb|EED10759.1| asparaginyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 438

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 110/250 (44%), Gaps = 26/250 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCID 74
           G  V L GWV+  R  G I FL +RD  G  Q   V        F+ A  +  E  L + 
Sbjct: 13  GQEVELRGWVYGKRSKGKIHFLILRDGTGFLQATVVKGEVPEEVFQRADHLPQETALKVW 72

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDL 133
           GLV  R  E        G  EL+ + +E++S+ + E P+   G +E+       +R L L
Sbjct: 73  GLV--RKDER-----APGGYELAVRNLEVVSLPQGEYPI---GPKEHGIDFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAE-----NFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R    H+      RI + +  R I E      F+    PILT S+ EG  D       + 
Sbjct: 123 R----HRRPFAVMRIRDELE-RGIHEFFGERGFLRFDAPILTPSAVEGTTDLFEVGLFDG 177

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L Q+ Q Y +   A  + + +   P FR E  ++ R   EF+ ++ E++F+  ++
Sbjct: 178 EKAY-LSQSGQLYAE-AGAMAYAKVYTFGPTFRAERSKTRRHLLEFWMVEPEVAFMTHEE 235

Query: 249 ILNTMENVLR 258
            +   E ++R
Sbjct: 236 NMALQEELVR 245



 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 15/86 (17%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPHG 537
           L   G+ EI  G  R H  E++ +     G+ +EV E      RFG +         PH 
Sbjct: 354 LAPEGYGEIIGGSQRIHDLELLRRKIREFGLPEEVYEWYLDLRRFGSV---------PHS 404

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G++R V  + G  +VRE   FP
Sbjct: 405 GFGLGLERTVAWICGLSHVREAIPFP 430


>gi|154484001|ref|ZP_02026449.1| hypothetical protein EUBVEN_01709 [Eubacterium ventriosum ATCC
           27560]
 gi|149735043|gb|EDM50929.1| hypothetical protein EUBVEN_01709 [Eubacterium ventriosum ATCC
           27560]
          Length = 513

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/293 (21%), Positives = 131/293 (44%), Gaps = 33/293 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           V D    V ++G +   R  G   F +++D  G  QV    +    E  +  +    + I
Sbjct: 67  VKDPAKLVSIAGRIMLKRVMGKASFCNVQDKTGNIQVYVARNELGDEPFEEYKDFKKMDI 126

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---PESIRFKYRF 130
             +V  +    +     TG+  + A ++ +LS +    L +  E+ +      +R++ R+
Sbjct: 127 GDIVGVKGYPFVTK---TGEKSIHATEVTLLSKS----LQILPEKHHGLTNTDLRYRQRY 179

Query: 131 LDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDL  +  + +  +KR++II+ +R  +  + F+E  TP+L  ++   A      +R  + 
Sbjct: 180 LDLIMNPEVKETFIKRSKIISEIRKYLDGQGFMEVETPMLVHNAGGAA------ARPFET 233

Query: 190 SFYALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            F AL +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++
Sbjct: 234 HFNALDEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAY 292

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
            +   +++  EN+ R + E+      +  N         F R+   DA+++Y 
Sbjct: 293 TDYHGMMDLTENLYRHLAEKVCGSAKIEYNGIEMDLSKPFERLTMVDAVKKYA 345



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+ MLL  A  +R+V LFP
Sbjct: 471 ALEIGMPPTGGIGFGIDRMCMLLTNAAAIRDVLLFP 506


>gi|196034320|ref|ZP_03101729.1| asparaginyl-tRNA synthetase [Bacillus cereus W]
 gi|218232058|ref|YP_002369357.1| asparaginyl-tRNA synthetase [Bacillus cereus B4264]
 gi|195992862|gb|EDX56821.1| asparaginyl-tRNA synthetase [Bacillus cereus W]
 gi|218160015|gb|ACK60007.1| asparagine--tRNA ligase [Bacillus cereus B4264]
          Length = 463

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 128/327 (39%), Gaps = 61/327 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V   
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             ++ +  A+           E+ A+KI+I  +++    P+  +R   E +R       L
Sbjct: 77  GKVIATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T   +   R R I +       +   F+   TPI+T S  EGA +     RV     
Sbjct: 125 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 181

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             +P+                       Q      A  F   +   P FR E+  + R  
Sbjct: 182 NNVPKGEDGQVDETKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270
            EF+ ++ E++F E  D++N  E++L+   +          EF N            N +
Sbjct: 242 AEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVI 301

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F RI Y +AI+       D + P+
Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328


>gi|30961858|gb|AAP40013.1| lysine tRNA synthetase [Citrobacter freundii]
          Length = 505

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 128/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I+  +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQIMAGIRQFMVGRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295
            + +      E   G  V      F ++   +AI++Y   T+  DL N
Sbjct: 300 TLAQNVLGTTEVPYGEEVFDFGKPFEKLTMREAIQKYRPETNMADLDN 347



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|332295595|ref|YP_004437518.1| Lysyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178698|gb|AEE14387.1| Lysyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 500

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 125/277 (45%), Gaps = 28/277 (10%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G +   R HG + F DI D  G  Q+         ++ K +  E        +       
Sbjct: 70  GRLFSKRLHGKMSFADIIDFTGKIQI---------QLKKDILGEQYDFFKNYIDIGDFIQ 120

Query: 85  INANII---TGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           ++ N+    TG+I +  + I+ILS A   LP    G +     +R+++R+LDL  +   +
Sbjct: 121 VSGNLFRTKTGEITVLVKTIKILSKALRALPEKWHGLKNV--ELRYRFRYLDLISNPKTR 178

Query: 141 NI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAP 198
           +I VKR++II+ +R       F+E  TP+L        A+ F+    V + + + L  AP
Sbjct: 179 DIFVKRSKIISFIRKFFEERGFLEVETPMLHIIPGGASAKPFVTYHNVLEKNLF-LRIAP 237

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL- 257
           + Y + L+   F + F+I   FR+E       P EF  L+   ++ + +D+++  E +L 
Sbjct: 238 ELYLKRLLIGNFHKIFEINRSFRNEGVSVKHNP-EFTMLEAYQAYSDLNDMMSLAEELLF 296

Query: 258 ------RGVFEEFSNGNTVSNN--FLRICYDDAIRRY 286
                  G  +    G T S      R+ +D++I+ Y
Sbjct: 297 YLCQNVLGTTDIVYQGKTYSFKPPLRRLDFDESIKEY 333



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDRIVMLL  + ++R+V  FP
Sbjct: 460 ALEHGMPPAGGLGLGIDRIVMLLTDSPSIRDVIFFP 495


>gi|332073880|gb|EGI84358.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 447

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLIHDESLDLQEAYVKTLLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|33152397|ref|NP_873750.1| lysyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|39932104|sp|Q7VLU5|SYK_HAEDU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33148620|gb|AAP96139.1| lysyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 498

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 126/291 (43%), Gaps = 22/291 (7%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            GD  + D    V++ G +   R  G   F  I+D  G  Q+    D+    +A+ V  +
Sbjct: 51  AGD-ALKDADVQVKVVGRIMLKRVMGKASFFTIQDVSGQIQLYVARDN----LAEGVYVD 105

Query: 69  WVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
            V   D G ++            TG++ +    +E+L+ +   PLP   +    + +R++
Sbjct: 106 NVGLWDLGDIVGVCGTLFKTK--TGELTVRCADVELLTKSLR-PLPNKHQGLVDQEMRYR 162

Query: 128 YRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R+LDL   +   +  V R+++++ +R   +   F+E  TP+L        A+ F+    
Sbjct: 163 QRYLDLIANEQSRRTFVIRSQVVSGIRQFFLERGFMEVETPMLQVIPGGAAAKPFVTHHN 222

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ Y + L+  GF+R F++   FR+E       P EF  ++   ++ +
Sbjct: 223 ALDVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMIEYYQAYAD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
             D+++  E +LR +  +      V            F RI   DAI +YG
Sbjct: 281 YHDLMDNTEQLLRKLALDILGTTAVPYGEYQFDFGQPFERITMHDAIVKYG 331



 Score = 41.2 bits (95), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VM+   A ++R+V LFP
Sbjct: 458 ALEHGLPPTAGEGLGIDRLVMIFANAPSIRDVILFP 493


>gi|228987808|ref|ZP_04147917.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228771856|gb|EEM20313.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|324328451|gb|ADY23711.1| asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 463

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 128/327 (39%), Gaps = 61/327 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V   
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             ++ +  A+           E+ A+KI+I  +++    P+  +R   E +R       L
Sbjct: 77  GKVIATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T   +   R R I +       +   F+   TPI+T S  EGA +     RV     
Sbjct: 125 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 181

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             +P+                       Q      A  F   +   P FR E+  + R  
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270
            EF+ ++ E++F E  D++N  E++L+   +          EF N            N +
Sbjct: 242 AEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVI 301

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F RI Y +AI+       D + P+
Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328


>gi|322373087|ref|ZP_08047623.1| asparagine--tRNA ligase [Streptococcus sp. C150]
 gi|321278129|gb|EFX55198.1| asparagine--tRNA ligase [Streptococcus sp. C150]
          Length = 448

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD----------SACFEIAKSV 65
           VG  + +  WV      G + FL +RD     Q VV  P+          +  F + K +
Sbjct: 15  VGEEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVVFKPNFIEKYGEEEGTEKFNVVKHL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    ++++  +E+ P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKFG-------YELDVTAVKVIGKSEDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR          R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAIQQIRNAIIYATYDFFDKNGFIKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 239 FLSHDESLDLQEAYVKALIQGVIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEAI 295



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDDYDALVAKMDELGMDR--TEYEFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|282880896|ref|ZP_06289589.1| asparagine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281305278|gb|EFA97345.1| asparagine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 464

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 117/275 (42%), Gaps = 32/275 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L  +D    V + GWV   R    + F+ + D   I   Q+V +P++   E  
Sbjct: 3   RTKIIDVLQSTDFNQEVLVKGWVRTHRSSKAVHFIALNDGSTIKNVQIVVDPETIDPETL 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSV-AEELPLPVFGEREY 120
           K++ +   LC+ G ++    +        GQ +E+  ++IEI  +   + P+   G+   
Sbjct: 63  KNITTGACLCVSGTLVESQGQ--------GQTVEIQGKEIEIYGLCGNDYPMQKKGQS-- 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--- 177
            E +R ++  L LR +T    +  R  +  ++        +    TPI+TAS  EGA   
Sbjct: 113 FEYMR-QHAHLRLRTNTFGAVMRIRHNMAIAIHKYFHDHGYFYFHTPIITASDAEGAGEM 171

Query: 178 -----RDFLVPSRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDE 223
                +D     R  QG       F+    +     QL   L A+   + +   P FR E
Sbjct: 172 FQVTTQDLNNLQRDEQGKVKYDDDFFGKMTSLTVSGQLEGELGATALGQIYTFGPTFRAE 231

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +  + R   EF+ ++ E++F + DD++   E  ++
Sbjct: 232 NSNTPRHLAEFWMIEPEIAFTDLDDLMGIEEEFIK 266


>gi|257460079|ref|ZP_05625183.1| lysyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442520|gb|EEV17659.1| lysyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 497

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 19/286 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L+G +   R  G   F +I D  G  Q+  + DS   E     +    L +  +++ R
Sbjct: 57  VSLAGRLKLKRVAGKSTFANIEDQSGNIQIYYSRDSIGEEDYAKFKKN--LEVGDIILVR 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLH 139
               +     TG+  + A KI + S A   PLP          +R++ R+LD+  +  + 
Sbjct: 115 GYAFVTQ---TGEFSIHASKITLASKAI-CPLPEKFHGLVDIEMRYRQRYLDMIMNPEVR 170

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           ++ +KR+ I++ +R       F+E  TP++   +    A+ F+          Y L  AP
Sbjct: 171 EDFIKRSIIVSEIRSFFEKHGFLEVETPMMHPIAGGANAKPFITHHNALDVDRY-LRIAP 229

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  G +  F+I   FR+E       P EF  ++   ++ + +D +N  E + +
Sbjct: 230 ELYLKRLVVGGMEAVFEINRNFRNEGMDLTHNP-EFTSIEFYWAWHDYNDAMNLTEELFK 288

Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDLRN 295
            +F+    G  +         S  F RI Y DA+ + G  +P + N
Sbjct: 289 ALFKRLRLGEILTYDEREIDFSKPFARIKYLDALTQIGGIEPQIVN 334



 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA    MPP  G   GIDR+ M+LL  K++R+V LFP
Sbjct: 451 RALSYAMPPTTGWGLGIDRLAMILLNKKSIRDVILFP 487


>gi|242045666|ref|XP_002460704.1| hypothetical protein SORBIDRAFT_02g033440 [Sorghum bicolor]
 gi|241924081|gb|EER97225.1| hypothetical protein SORBIDRAFT_02g033440 [Sorghum bicolor]
          Length = 552

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 134/338 (39%), Gaps = 61/338 (18%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE 68
           D G + VG  + + GWV   R    + F+++ D   ++  Q V  PD+  ++   SV + 
Sbjct: 89  DEGAAWVGKELTVRGWVRTCRAQRTVTFVEVNDGSCLSNMQCVLTPDTEGYDQIDSVTTG 148

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + ++G+V S             ++EL   KI ++  ++    P+  +R   E +R   
Sbjct: 149 ASVLVEGVVASSQGGK-------QKVELKVSKITVIGKSDPTSFPIQKKRASREFLR--- 198

Query: 129 RFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGA-RDFLVPSR 185
               LR  T     V R R  +     +   +N F+  S+PI+TAS  EGA   F V + 
Sbjct: 199 TVAHLRPRTNTFGAVARVRNALAYATHKFFQDNGFVWVSSPIITASDCEGAGEQFYVTTL 258

Query: 186 VNQGS----------------------FYALPQAPQQYKQL---LMASGFDRYFQIAPCF 220
           ++  +                      F+  P       QL     AS     +   P F
Sbjct: 259 LSNSAEGGSLLKDIPATKDGRVDWSQDFFCKPAFLTVSGQLNGETYASALSDIYTFGPTF 318

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT----MENVLRGVFE------EFSN---- 266
           R E+  + R   EF+ ++ E++F + +D +      ++ V++ + E      +F N    
Sbjct: 319 RAENSNTARHLAEFWMIEPELAFADLNDDMACATAYLQYVVKYILENCKEDMDFFNTWVE 378

Query: 267 -------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
                   + V  NF+ + Y DA+      K +   P+
Sbjct: 379 KGIIDRLNDVVEKNFIHLSYTDAVELLLGSKKEFEFPV 416


>gi|291296503|ref|YP_003507901.1| asparaginyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290471462|gb|ADD28881.1| asparaginyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 441

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 18/245 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKSVRSEWVLCI 73
           G  V + GW+   R  G I FL +RD  G  Q  A     PD A FE A  +  E  L +
Sbjct: 14  GQEVIIRGWLTGRRSKGKIHFLQLRDGTGFMQATAFKGELPD-AEFEEADHLPQESALEV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132
            GLV + S          G  ELS + + ++S  + E P+     +E+       +R L 
Sbjct: 73  RGLVRADSR-------APGGYELSVRGLRVISRPSREYPI---TPKEHGVDFLMDHRHLY 122

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       +  R  +  ++     A  F+    PILT ++ EG  D L    +  G   
Sbjct: 123 LRHRRAWAVLRVRDELERAIHDFFHARGFVRLDAPILTPNAVEGTTD-LFEVDLFDGEKA 181

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A  F + +   P FR E  ++ R   EF+ ++ E++F+  ++ +  
Sbjct: 182 YLSQSGQLYAEA-GAMAFGKVYTFGPTFRAERSKTRRHLLEFWMIEPEVAFMTHEENMQL 240

Query: 253 MENVL 257
            E ++
Sbjct: 241 QEELV 245


>gi|225857168|ref|YP_002738679.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|225725202|gb|ACO21054.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 447

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           +G  V +  WV      G I FL +RD     Q VA  P+             F++ K +
Sbjct: 14  IGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|224024193|ref|ZP_03642559.1| hypothetical protein BACCOPRO_00916 [Bacteroides coprophilus DSM
           18228]
 gi|224017415|gb|EEF75427.1| hypothetical protein BACCOPRO_00916 [Bacteroides coprophilus DSM
           18228]
          Length = 575

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 134/286 (46%), Gaps = 25/286 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  Q+    D  C +  K + +     +  L    
Sbjct: 56  VSVAGRIMSRRVMGKASFIELQDSKGRIQIYITRDDICPDENKDLYNVVFKRLLDLGDFI 115

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             E        G+I + AQK+ +LS +   PLP+        + + E PE +R++ R++D
Sbjct: 116 GIEGFVFRTQMGEISIHAQKLTVLSKSIR-PLPIVKYKDGVAYDKFEDPE-LRYRQRYVD 173

Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   K+I +KR ++ NSMR    ++ +IE  TPIL + +    AR F+         
Sbjct: 174 LVVNDGVKDIFLKRNKVYNSMREYFNSKGYIEVETPILQSIAGGAAARPFITHHNALDIP 233

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ +++ + + ++
Sbjct: 234 LY-MRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMEIYVAYKDYNWMM 291

Query: 251 NTMENVLRGVFEEFSNGNT---VSNN-------FLRICYDDAIRRY 286
              EN++  +  +  NG T   V +N       F R+   D+I+ +
Sbjct: 292 KFTENMIEKICMDV-NGTTEVKVGDNIINFKAPFKRVTMLDSIKEF 336



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VML+ G   ++EV  FP
Sbjct: 461 RALEYGMPPTSGMGIGMDRLVMLMTGQSTIQEVLFFP 497


>gi|50913904|ref|YP_059876.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|59798489|sp|Q5XD20|SYN_STRP6 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|50902978|gb|AAT86693.1| Asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 448

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---------NPDSAC--FEIAKSV 65
           VG  V +  WV      G I F+ +RD     Q VA           +S    F++ K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +EI+  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKFG-------YELDITDLEIIGESHEYPVT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYATYEFFDQNGFIKFDSPILSENAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGKPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           F+  ++ L+  E     +++GV +                   ++  F R+ YDDAI
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYITEPFKRVSYDDAI 295



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ K   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDNYDALVAKMDELGMDKS--EYDFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|22536914|ref|NP_687765.1| lysyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|25010826|ref|NP_735221.1| lysyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76798749|ref|ZP_00780967.1| lysyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77405989|ref|ZP_00783067.1| lysyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77410771|ref|ZP_00787129.1| lysyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77413074|ref|ZP_00789275.1| lysyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|39932195|sp|Q8E0I1|SYK_STRA5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|39932198|sp|Q8E656|SYK_STRA3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|22533765|gb|AAM99637.1|AE014225_20 lysyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|23095205|emb|CAD46415.1| lysyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76585904|gb|EAO62444.1| lysyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77160867|gb|EAO71977.1| lysyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77163150|gb|EAO74103.1| lysyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77175384|gb|EAO78175.1| lysyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 496

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 23/265 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
           +Y   S  DL   D+     ++G +   R  G + F  I+D  G  Q+    DS     +
Sbjct: 47  KYADKSKEDL--HDIEETATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDSVGEENY 104

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGER 118
           EI K       L ++G VM             G++ + A  I  LS A   PLP  F   
Sbjct: 105 EIFKKADLGDFLGVEGQVMRTDM---------GELSIKATHITHLSKALR-PLPEKFHGL 154

Query: 119 EYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPE 175
              E+I ++ R LDL   RD+  +  V R++II+ +R  M +  F+E  TP+L   +   
Sbjct: 155 TDIETI-YRKRHLDLISNRDSFDR-FVTRSKIISEIRRFMDSNGFLEVETPVLHNEAGGA 212

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+      Q     L  A + + + L+  G +R ++I   FR+E   +   P EF 
Sbjct: 213 SARPFITHHNA-QDIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFT 270

Query: 236 QLDMEMSFVEQDDILNTMENVLRGV 260
            ++   ++ +  DI++  E +++ V
Sbjct: 271 SIEAYQAYADYQDIMDLTEGIIQHV 295



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQASAKELGDDEATGVDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|313205755|ref|YP_004044932.1| lysyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445071|gb|ADQ81426.1| lysyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|325336803|gb|ADZ13077.1| Lysyl-tRNA synthetase (class II) [Riemerella anatipestifer RA-GD]
          Length = 566

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 134/291 (46%), Gaps = 28/291 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-G 75
           GS V+++G +   R  G   F +++D  G  QV  N D  C E  K++ +E +   +D G
Sbjct: 47  GSKVKIAGRLMSRRIQGKASFAELQDSEGRIQVYFNRDEICPEEDKTLYNEVYKHLLDIG 106

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGER-------EYPESIRFK 127
            ++    E     +  G++ +  +   +L+     LP P   E          PE +R++
Sbjct: 107 DIIGVEGELFKTQV--GEMTVMVKNFTLLTKTLRPLPQPRTDENGVVHDAFNDPE-LRYR 163

Query: 128 YRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPS 184
            R++DL  +   K I VKRT++ N+MR       + E  TPIL A  P G  AR F+   
Sbjct: 164 QRYVDLTVNPHVKEIFVKRTKLFNAMRGFFNDAGYFEVETPILQA-IPGGASARPFITHH 222

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ 
Sbjct: 223 NALDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYK 280

Query: 245 EQDDILNTMENVLR-------GVFEEFSNGNTVS--NNFLRICYDDAIRRY 286
           + + +++  E +L        G  E     +T++    + RI   DAIR++
Sbjct: 281 DYNWMMDFTERLLEHCATAVNGKPESQFGEHTINWKAPYPRISMTDAIRKF 331



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VM L    +++EV  FP
Sbjct: 456 RALEYGMPPTAGLGIGMDRLVMFLTNNASIQEVLFFP 492


>gi|270624655|ref|ZP_06221913.1| aspartate--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270317679|gb|EFA29093.1| aspartate--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 74

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/72 (40%), Positives = 44/72 (61%)

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
           FG L  A + G PPH G+A G+DR+ MLL G +N+R+V  FP +     L+  +PS  + 
Sbjct: 1   FGFLLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANP 60

Query: 582 EQLRELGLRIVE 593
           + L EL + +V+
Sbjct: 61  QALEELAISVVK 72


>gi|76787024|ref|YP_329498.1| lysyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|123602016|sp|Q3K1V5|SYK_STRA1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|76562081|gb|ABA44665.1| lysyl-tRNA synthetase [Streptococcus agalactiae A909]
          Length = 496

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 23/265 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
           +Y   S  DL   D+     ++G +   R  G + F  I+D  G  Q+    DS     +
Sbjct: 47  KYADKSKEDL--HDIEETATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDSVGEENY 104

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGER 118
           EI K       L ++G VM             G++ + A  I  LS A   PLP  F   
Sbjct: 105 EIFKKADLGDFLGVEGQVMRTDM---------GELSIKATHITHLSKALR-PLPEKFHGL 154

Query: 119 EYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPE 175
              E+I ++ R LDL   RD+  +  V R++II+ +R  M +  F+E  TP+L   +   
Sbjct: 155 TDIETI-YRKRHLDLISNRDSFDR-FVTRSKIISEIRRFMDSNGFLEVETPVLHNEAGGA 212

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+      Q     L  A + + + L+  G +R ++I   FR+E   +   P EF 
Sbjct: 213 SARPFITHHNA-QDIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFT 270

Query: 236 QLDMEMSFVEQDDILNTMENVLRGV 260
            ++   ++ +  DI++  E +++ V
Sbjct: 271 SIEAYQAYADYQDIMDLTEGIIQHV 295



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQASAKELGDDEATGVDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|126667156|ref|ZP_01738130.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
           [Marinobacter sp. ELB17]
 gi|126628312|gb|EAZ98935.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
           [Marinobacter sp. ELB17]
          Length = 514

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 24/197 (12%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP   +       R+++R++DL  +   + + + R++II +MR  +   +F+E  TP+L
Sbjct: 143 PLPEKHKGLTDTESRYRHRYVDLMVNEDSRRVFLARSKIITAMRQFLADRDFMEVETPML 202

Query: 170 TASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
               P GA  R F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   +
Sbjct: 203 QVI-PGGATARPFMTHHNALGIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLST 260

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-------NFLRICYD 280
              P EF  ++   ++ + +D+++  E++LR + E+    + V N       N  RI YD
Sbjct: 261 RHNP-EFTMVEFYQAYADYNDLMDLTEDMLRSIAEQVLGSSLVVNTAVDADGNETRIEYD 319

Query: 281 -----------DAIRRY 286
                      DAI RY
Sbjct: 320 FGKTFDRLTVVDAIVRY 336



 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G   GIDR+ MLL  + ++R+V LFP
Sbjct: 464 ALEYGMPPTAGEGIGIDRLAMLLTNSASIRDVILFP 499


>gi|77409348|ref|ZP_00786050.1| lysyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77172050|gb|EAO75217.1| lysyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 496

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 23/265 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
           +Y   S  DL   D+     ++G +   R  G + F  I+D  G  Q+    DS     +
Sbjct: 47  KYADKSKEDL--HDIEETATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDSVGEENY 104

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGER 118
           EI K       L ++G VM             G++ + A  I  LS A   PLP  F   
Sbjct: 105 EIFKKADLGDFLGVEGQVMRTDM---------GELSIKATHITHLSKALR-PLPEKFHGL 154

Query: 119 EYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPE 175
              E+I ++ R LDL   RD+  +  V R++II+ +R  M +  F+E  TP+L   +   
Sbjct: 155 TDIETI-YRKRHLDLISNRDSFDR-FVTRSKIISEIRRFMDSNGFLEVETPVLHNEAGGA 212

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+      Q     L  A + + + L+  G +R ++I   FR+E   +   P EF 
Sbjct: 213 SARPFITHHNA-QDIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFT 270

Query: 236 QLDMEMSFVEQDDILNTMENVLRGV 260
            ++   ++ +  DI++  E +++ V
Sbjct: 271 SIEAYQAYADYQDIMDLTEGIIQHV 295



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQASAKELGDDEATGVDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|297571583|ref|YP_003697357.1| lysyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931930|gb|ADH92738.1| lysyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 1062

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 118/261 (45%), Gaps = 23/261 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTHS  D  V+     + L+G VH VR +GG++F DI + +   QV+       FE  +S
Sbjct: 618 RTHSIAD-AVNMEAGHMSLTGRVHHVRDYGGVVFADIVEEHAHIQVI-------FE--RS 667

Query: 65  VRSEWVL---CID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               W     C++ G ++S + +   ++  +G   L  +    ++    +P+P       
Sbjct: 668 AGEAWATFRACVNRGDLVSVTGDLGASH--SGTFSLLGESWA-MAAKSLVPMPKIPLTN- 723

Query: 121 PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGAR 178
              +R K R +D   +    N+ + R +++  +R  + A+ ++E  TPIL T      AR
Sbjct: 724 -PHLRAKLRHIDYAMNPQAYNLFRARAQVVAYVRQTLYAQGYLEAETPILQTIHGGANAR 782

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F    R    +   L  AP+ Y + L+  G  + F+I   FR+E   +   P EF  L+
Sbjct: 783 PFRTHIRAYDQAL-TLRIAPELYLKRLVVGGTPKVFEIGRNFRNEGVDATHNP-EFTSLE 840

Query: 239 MEMSFVEQDDILNTMENVLRG 259
              ++ + D +    E + RG
Sbjct: 841 AYEAYGDWDTMRVLTEELFRG 861



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 1/36 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + GMPP GG+  G+DR+VM L G   +R+V  FP
Sbjct: 1022 ALEFGMPPTGGLGIGMDRMVMFLTG-TTIRDVLAFP 1056


>gi|149773189|dbj|BAF64769.1| Lysyl-tRNA synthase class II [Shewanella livingstonensis]
          Length = 497

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 106/225 (47%), Gaps = 24/225 (10%)

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--------RFKYRFLDLRRDTLHKN 141
           + GQ+ LS  K ++    EE  L     R  PE          R++ R++DL  +   +N
Sbjct: 110 VKGQLHLSG-KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEDSRN 168

Query: 142 -IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
             + R++++ ++R  M+ + F+E  TP++    P GA  R F+        + Y L  AP
Sbjct: 169 AFIMRSKVVAAIRNFMVKKEFMEVETPMMHVI-PGGASARPFVTHHNALDMAMY-LRIAP 226

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L 
Sbjct: 227 ELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLG 285

Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDLR 294
            + +E     ++            + R+   +AI++Y  D   ++
Sbjct: 286 SIAQELLGSTSMPYGEETVEFGGAYARLSMLEAIQKYNPDNATIQ 330



 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 456 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 491


>gi|30264628|ref|NP_847005.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530098|ref|YP_021447.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49187449|ref|YP_030701.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|52140949|ref|YP_085881.1| asparaginyl-tRNA synthetase [Bacillus cereus E33L]
 gi|65321925|ref|ZP_00394884.1| COG0017: Aspartyl/asparaginyl-tRNA synthetases [Bacillus anthracis
           str. A2012]
 gi|165871453|ref|ZP_02216100.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167635590|ref|ZP_02393902.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167641599|ref|ZP_02399846.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170688249|ref|ZP_02879459.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170708691|ref|ZP_02899129.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177653163|ref|ZP_02935450.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190566877|ref|ZP_03019793.1| asparaginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196042100|ref|ZP_03109384.1| asparagine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196044950|ref|ZP_03112184.1| asparaginyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218905785|ref|YP_002453619.1| asparaginyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225866533|ref|YP_002751911.1| asparaginyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227817342|ref|YP_002817351.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228917197|ref|ZP_04080754.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228929605|ref|ZP_04092623.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935868|ref|ZP_04098678.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948283|ref|ZP_04110566.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229093653|ref|ZP_04224753.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229124124|ref|ZP_04253316.1| Asparaginyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229603957|ref|YP_002868837.1| asparagine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254686949|ref|ZP_05150807.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254724513|ref|ZP_05186296.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254736666|ref|ZP_05194372.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741704|ref|ZP_05199391.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254754699|ref|ZP_05206734.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757531|ref|ZP_05209558.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|38258300|sp|Q81L32|SYN_BACAN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|59798502|sp|Q633N6|SYN_BACCZ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|30259286|gb|AAP28491.1| asparagine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505246|gb|AAT33922.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49181376|gb|AAT56752.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|51974418|gb|AAU15968.1| asparagine--tRNA ligase (asparaginyl-tRNA synthetase) [Bacillus
           cereus E33L]
 gi|164712750|gb|EDR18280.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510484|gb|EDR85883.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167529010|gb|EDR91765.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170126371|gb|EDS95260.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170667755|gb|EDT18508.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172081687|gb|EDT66758.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190561868|gb|EDV15837.1| asparaginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196024438|gb|EDX63111.1| asparaginyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196027036|gb|EDX65659.1| asparagine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|218535284|gb|ACK87682.1| asparaginyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225786582|gb|ACO26799.1| asparagine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227004623|gb|ACP14366.1| asparagine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228659426|gb|EEL15074.1| Asparaginyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228689740|gb|EEL43547.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228811270|gb|EEM57608.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228823636|gb|EEM69458.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829992|gb|EEM75611.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842398|gb|EEM87489.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229268365|gb|ACQ50002.1| asparagine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 463

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 128/327 (39%), Gaps = 61/327 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V   
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             ++ +  A+           E+ A+KI+I  +++    P+  +R   E +R       L
Sbjct: 77  GKVIATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T   +   R R I +       +   F+   TPI+T S  EGA +     RV     
Sbjct: 125 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 181

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             +P+                       Q      A  F   +   P FR E+  + R  
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270
            EF+ ++ E++F E  D++N  E++L+   +          EF N            N +
Sbjct: 242 AEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVI 301

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F RI Y +AI+       D + P+
Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328


>gi|322391555|ref|ZP_08065024.1| asparagine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321145638|gb|EFX41030.1| asparagine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 448

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEETGLEKFDTIKHL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 75  SQETSVFVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDEAI 295



 Score = 40.4 bits (93), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++    ++G+ +   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMESLGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 420 IERMVTFAAGTKHIREAIPFP 440


>gi|301056067|ref|YP_003794278.1| asparaginyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378236|gb|ADK07140.1| asparaginyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
           CI]
          Length = 463

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 128/327 (39%), Gaps = 61/327 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V   
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             ++ +  A+           E+ A+KI+I  +++    P+  +R   E +R       L
Sbjct: 77  GKVIATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T   +   R R I +       +   F+   TPI+T S  EGA +     RV     
Sbjct: 125 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 181

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             +P+                       Q      A  F   +   P FR E+  + R  
Sbjct: 182 NNVPKGEDGQVDETKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270
            EF+ ++ E++F E  D++N  E++L+   +          EF N            N +
Sbjct: 242 AEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVI 301

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F RI Y +AI+       D + P+
Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328


>gi|251794120|ref|YP_003008851.1| lysyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247541746|gb|ACS98764.1| lysyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 505

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 120/251 (47%), Gaps = 23/251 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS------ACFEIAKSVRSEWVLCID 74
           V ++G + + R  G   F  I+D  G  Q+    D+      A FE+   +    ++ I 
Sbjct: 68  VSVAGRIMQKRGMGKASFAHIQDLSGKIQIYVRKDTVEANKYAAFEM---LDIGDIVGIT 124

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G+V   +         TG++ + A ++E+L+ +  LPLP          +R++ R++DL 
Sbjct: 125 GVVFKTN---------TGEVSVKAYEVEVLTKSL-LPLPDKYHGLKDVELRYRQRYVDLI 174

Query: 135 RD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
            +  + +  + R+RII SMR  + ++ ++E  TP L + +    AR F+          Y
Sbjct: 175 VNPDVQQTFITRSRIIQSMRRYLDSKGYLEVETPTLHSIAGGAAARPFITHHNALDMQLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  A + + + L+  G ++ ++I   +R+E   +   P EF  +++  ++ +  DI+  
Sbjct: 235 -MRIAIELHLKRLIVGGLEKVYEIGRVYRNEGISTRHNP-EFTMIELYEAYADYKDIMAL 292

Query: 253 MENVLRGVFEE 263
            EN++  + +E
Sbjct: 293 TENLIAHIAQE 303



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  G+DR+VMLL  A ++R+V LFP
Sbjct: 461 RALEYGMPPTGGLGIGVDRLVMLLTDAPSIRDVLLFP 497


>gi|148264997|ref|YP_001231703.1| asparaginyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|189083272|sp|A5G5R2|SYN_GEOUR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|146398497|gb|ABQ27130.1| asparaginyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 461

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 111/273 (40%), Gaps = 29/273 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  S  G  + L GWV  VR    + FL I D   +T  QVV  P    ++  
Sbjct: 4   RTRVSAALAASRPGEELVLKGWVRTVRVGKDVTFLAINDGSCMTSLQVVVEPALPNYQDV 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYP 121
             + +   + + G++    A         GQ  EL+A+++EI+  A++   P+  +R   
Sbjct: 64  CRIGTGSAVAVRGILRESPA--------AGQKYELAAEELEIIGPADD-SYPLQKKRHSF 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R     L  R +T       R+ +  ++        F+   TPI+TA+  EGA +  
Sbjct: 115 EYLR-TIAHLRPRTNTFGAVFRVRSSLAQAVHRFFAERGFLYVHTPIITANDCEGAGELF 173

Query: 182 VPSRVN-------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDP 225
             + ++              G F+A         QL   L A  F   +   P FR E+ 
Sbjct: 174 RVTTLDMARPPLAAGEVDYSGDFFAQATGLTVSGQLEGELFAQAFSDIYTFGPTFRAENS 233

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            + R   EF+ ++ E++F +        E+ L+
Sbjct: 234 NTARHAAEFWMIEPELAFADLMADAALAEDFLK 266



 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    +++L+  + +GI+    E+       + + G  PH G   G 
Sbjct: 378 LVPKVGEIIGGSQREERLDLLLERMAQMGIN----EDGLWWYLDSRRWGSCPHAGFGLGF 433

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R++M L G +N+R+V  FP +
Sbjct: 434 ERLLMYLTGMENIRDVIPFPRT 455


>gi|15640683|ref|NP_230313.1| lysyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587863|ref|ZP_01677620.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 2740-80]
 gi|121728407|ref|ZP_01681435.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae V52]
 gi|147674731|ref|YP_001216158.1| lysyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153216961|ref|ZP_01950725.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 1587]
 gi|153801992|ref|ZP_01956578.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae MZO-3]
 gi|153818684|ref|ZP_01971351.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae NCTC 8457]
 gi|153826526|ref|ZP_01979193.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae MZO-2]
 gi|153829165|ref|ZP_01981832.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 623-39]
 gi|227080845|ref|YP_002809396.1| heat inducible lysyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229505714|ref|ZP_04395224.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae BX 330286]
 gi|229508712|ref|ZP_04398205.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae B33]
 gi|229512925|ref|ZP_04402392.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae TMA 21]
 gi|229519539|ref|ZP_04408982.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae RC9]
 gi|229520955|ref|ZP_04410377.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae TM 11079-80]
 gi|229530471|ref|ZP_04419859.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae 12129(1)]
 gi|229608733|ref|YP_002879381.1| lysyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254226528|ref|ZP_04920111.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae V51]
 gi|254291903|ref|ZP_04962685.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae AM-19226]
 gi|254850995|ref|ZP_05240345.1| lysyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|9655101|gb|AAF93829.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121547899|gb|EAX57983.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 2740-80]
 gi|121629341|gb|EAX61773.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae V52]
 gi|124114026|gb|EAY32846.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 1587]
 gi|124122451|gb|EAY41194.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae MZO-3]
 gi|125620932|gb|EAZ49283.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae V51]
 gi|126510764|gb|EAZ73358.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae NCTC 8457]
 gi|146316614|gb|ABQ21153.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae O395]
 gi|148875354|gb|EDL73489.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 623-39]
 gi|149739706|gb|EDM53913.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae MZO-2]
 gi|150422189|gb|EDN14154.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae AM-19226]
 gi|227008733|gb|ACP04945.1| heat inducible lysyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227012489|gb|ACP08699.1| heat inducible lysyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229332244|gb|EEN97732.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae 12129(1)]
 gi|229342188|gb|EEO07184.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae TM 11079-80]
 gi|229344228|gb|EEO09203.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae RC9]
 gi|229350174|gb|EEO15127.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae TMA 21]
 gi|229354236|gb|EEO19166.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae B33]
 gi|229357937|gb|EEO22854.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae BX 330286]
 gi|229371388|gb|ACQ61811.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae MJ-1236]
 gi|254846700|gb|EET25114.1| lysyl-tRNA synthetase [Vibrio cholerae MO10]
          Length = 512

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 16/207 (7%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150
           G + ++ ++ ++L+ A   PLP        + +R++ R++DL  +   +N  + R+++++
Sbjct: 135 GDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMS 193

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 194 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 251

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V  E     
Sbjct: 252 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGST 310

Query: 269 TV---------SNNFLRICYDDAIRRY 286
           ++            + R+   DAI+ Y
Sbjct: 311 SMPYGEHTVEFGGKYARMSMFDAIKHY 337



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 471 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 506


>gi|315022849|gb|EFT35873.1| lysyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
          Length = 565

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 134/291 (46%), Gaps = 28/291 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-G 75
           GS V+++G +   R  G   F +++D  G  QV  N D  C E  K++ +E +   +D G
Sbjct: 46  GSKVKIAGRLMSRRIQGKASFAELQDSEGRIQVYFNRDEICPEEDKTLYNEVYKHLLDIG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGER-------EYPESIRFK 127
            ++    E     +  G++ +  +   +L+     LP P   E          PE +R++
Sbjct: 106 DIIGVEGELFKTQV--GEMTVMVKNFTLLTKTLRPLPQPRTDENGVVHDAFNDPE-LRYR 162

Query: 128 YRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPS 184
            R++DL  +   K I VKRT++ N+MR       + E  TPIL A  P G  AR F+   
Sbjct: 163 QRYVDLTVNPHVKEIFVKRTKLFNAMRGFFNDAGYFEVETPILQA-IPGGASARPFITHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ 
Sbjct: 222 NALDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYK 279

Query: 245 EQDDILNTMENVLR-------GVFEEFSNGNTVS--NNFLRICYDDAIRRY 286
           + + +++  E +L        G  E     +T++    + RI   DAIR++
Sbjct: 280 DYNWMMDFTERLLEHCATAVNGKPESQFGEHTINWKAPYPRISMTDAIRKF 330



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VM L    +++EV  FP
Sbjct: 455 RALEYGMPPTAGLGIGMDRLVMFLTNNASIQEVLFFP 491


>gi|261212225|ref|ZP_05926511.1| lysyl-tRNA synthetase (class II) [Vibrio sp. RC341]
 gi|260838833|gb|EEX65484.1| lysyl-tRNA synthetase (class II) [Vibrio sp. RC341]
          Length = 510

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 118/243 (48%), Gaps = 25/243 (10%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150
           G + ++ ++ ++L+ A   PLP        + +R++ R++DL  +   +N  V R+++++
Sbjct: 133 GDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNESSRNAFVVRSKVMS 191

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 192 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V  E     
Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGST 308

Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEF 311
           ++            + R+   +AI+ Y  +        + D++N  +M ++ +  VH E 
Sbjct: 309 SMPYGEHTVEFGGKYARMSMVEAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKS-VHVEV 367

Query: 312 RVF 314
             F
Sbjct: 368 EPF 370



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL  +  +R+V LFP
Sbjct: 469 ALEHGLPPTAGQGIGIDRLVMLLTNSHTIRDVILFP 504


>gi|238763212|ref|ZP_04624177.1| Lysyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238698485|gb|EEP91237.1| Lysyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 505

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 21/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+  + D     +      +W L   G ++  
Sbjct: 68  VTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYNEEFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 RGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  K R++++  +R  M+ + F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 NTFKVRSQVMAGIRSFMVEKGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E + 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286
           R + E+    + V            F ++   +AI +Y
Sbjct: 299 RTLTEKVLGSSVVQYGDQTFDFGKPFAKLTMKEAICKY 336



 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F++   +KE  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|188524159|ref|ZP_02557488.2| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|198273287|ref|ZP_03205823.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|195659755|gb|EDX53135.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|198249807|gb|EDY74587.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
          Length = 493

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 121/259 (46%), Gaps = 16/259 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y+  S  +L   D+   V L+G +  VR   GII  D      I     N D   F   K
Sbjct: 45  YKNFSKEELHNMDLKK-VTLAGRLIGVRQTFGII-QDFSTKLQIYINKKNVDPEVFSTFK 102

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+    ++ + G+ M  +++ I  N+    I+L A+ +++L      P    G  +  E 
Sbjct: 103 SLDIGDIVELQGVAMKTNSDEITLNVTN--IKLVAKSLKVL------PEKYHGLVD--EE 152

Query: 124 IRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFL 181
           I+ + R+LDL  +   KN  +KR+ II  MR  + ++ F E  TP+L    S   AR F+
Sbjct: 153 IKARQRYLDLIVNDESKNTFIKRSLIIREMRNWLDSQGFFEVETPVLQDILSGAAARPFI 212

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                    +Y L  A +   +  +  GF++ ++I   FR+E   S   P EF  +++ +
Sbjct: 213 THHNTLDKQYY-LRIATEIALKKCIVGGFEKVYEIGRIFRNEGMDSTHNP-EFTSVELYV 270

Query: 242 SFVEQDDILNTMENVLRGV 260
           ++V+   I+   E+++R +
Sbjct: 271 AYVDLWYIMQLTEDLIRHI 289



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VMLL    ++R V LFP
Sbjct: 451 ALEYGMPPTGGLGIGVDRLVMLLTSNDSIRNVLLFP 486


>gi|85712972|ref|ZP_01044011.1| Lysyl-tRNA synthetase class II [Idiomarina baltica OS145]
 gi|85693210|gb|EAQ31169.1| Lysyl-tRNA synthetase class II [Idiomarina baltica OS145]
          Length = 503

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 125/280 (44%), Gaps = 19/280 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+++G +   R  G   F  I+D  G  Q+    D+       S   +W L   G +
Sbjct: 62  GVRVKVAGRMMTRRIMGKASFATIQDMSGKIQLYVARDNLPEGFYNSEFKKWDL---GDI 118

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +  S         TG++ +    + +L+ A   PLP        +  R++ R+LDL  + 
Sbjct: 119 IGASGVLFKTG--TGELSVLVDDVRLLTKALR-PLPDKFHGLADQETRYRQRYLDLITNE 175

Query: 138 LHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
             +N  + R+R+I+ +R  +    F+E  TP++ T      AR F           + L 
Sbjct: 176 ESRNTFLVRSRVIDYIRRYLNEHQFLEVETPMMQTIPGGAAARPFSTHHNALDMELF-LR 234

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF++ F+I   FR+E   +   P EF  L+    + +  D+++  E+
Sbjct: 235 IAPELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNP-EFTMLEFYWGYADYFDLMDMTED 293

Query: 256 VLRGVFEE------FSNGNTVSN---NFLRICYDDAIRRY 286
           +LRG+ ++      F +G    +    F R+   +AI +Y
Sbjct: 294 MLRGIAQDVLGSTTFESGGVTYDFGQRFERMTVLEAIIKY 333



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G E+A+G    + +E   Q F +   +KE  ++    +   Y  A + GMPP 
Sbjct: 410 RFEFFAGGRELANGFSELNDAEDQAQRFRDQVEAKEAGDDEAMFYDEDYVTALEHGMPPT 469

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  +  +R+V LFP
Sbjct: 470 AGEGIGIDRLVMLLTDSSTIRDVLLFP 496


>gi|325568182|ref|ZP_08144623.1| lysine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325158383|gb|EGC70534.1| lysine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 516

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 133/305 (43%), Gaps = 38/305 (12%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L           ++++     ++G +   R  G   F  ++D  G  Q+    
Sbjct: 58  RTHNSAELHELFDQRTKEELAEMNLSASIAGRIVTKRGKGKAGFAHLQDREGRIQIYVRK 117

Query: 55  DSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
           D      +E+ K         + G +M            TG++ + A++I ILS A   P
Sbjct: 118 DQVGDEPYEVFKHADLGDFFGVSGEIMKTD---------TGEVTIKAKEIVILSKALR-P 167

Query: 112 LPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           LP           R++ R+LDL   +++  +  +KR++II+ +R  +    +IE  TP+L
Sbjct: 168 LPDKYHGLTNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGHGYIEVETPVL 226

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + L+  G ++ ++I   FR+E   + 
Sbjct: 227 HNQAGGAAARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTT 285

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICY 279
             P EF  L+   ++ +  D+++  E ++R   E+  +  T+         +++F RI  
Sbjct: 286 HNP-EFTMLEAYTAYTDFKDVMDLTEGIIRNAAEKVLHTATIQYDGQEVDLASDFARIHM 344

Query: 280 DDAIR 284
            DAI+
Sbjct: 345 VDAIK 349



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP
Sbjct: 478 ALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 513


>gi|59711060|ref|YP_203836.1| lysyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|75354565|sp|Q5E7P8|SYK_VIBF1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|59479161|gb|AAW84948.1| lysine tRNA synthetase, inducible [Vibrio fischeri ES114]
          Length = 501

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 18/247 (7%)

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
           AK V+ E      GL +        A   +G+ +L     E + + + L PLP       
Sbjct: 92  AKEVQKELKDKYQGLDIGDIIGVKGALHKSGKGDLYVNMEEYVLLTKALRPLPEKFHGLT 151

Query: 121 PESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA- 177
            + +R++ R++DL    D+ H  IV R++++ ++R  M+ + F+E  TP++    P GA 
Sbjct: 152 DQEMRYRQRYVDLIVNDDSRHAFIV-RSKVVAAIRNFMVDKGFMEVETPMMHVI-PGGAS 209

Query: 178 -RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
            R F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  
Sbjct: 210 ARPFVTHHNALDVDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTM 267

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
           ++  M++ + +D+++  E +L  V       + +            + R+   DAI++Y 
Sbjct: 268 MEFYMAYADYNDLMDLTEEMLSTVATSVLGSDKMPYGEHTVDFGGKYARMSMLDAIKQYN 327

Query: 288 TDKPDLR 294
            D  +++
Sbjct: 328 PDHAEIQ 334



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 460 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 495


>gi|255743876|ref|ZP_05417832.1| lysyl-tRNA synthetase (class II) [Vibrio cholera CIRS 101]
 gi|262156095|ref|ZP_06029214.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae INDRE 91/1]
 gi|262169963|ref|ZP_06037653.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae RC27]
 gi|31340515|sp|Q9KU60|SYK_VIBCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|255738507|gb|EET93896.1| lysyl-tRNA synthetase (class II) [Vibrio cholera CIRS 101]
 gi|262021697|gb|EEY40408.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae RC27]
 gi|262030131|gb|EEY48776.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae INDRE 91/1]
 gi|327483463|gb|AEA77870.1| Lysyl-tRNA synthetase (class II) [Vibrio cholerae LMA3894-4]
          Length = 510

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 16/207 (7%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150
           G + ++ ++ ++L+ A   PLP        + +R++ R++DL  +   +N  + R+++++
Sbjct: 133 GDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMS 191

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 192 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V  E     
Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGST 308

Query: 269 TV---------SNNFLRICYDDAIRRY 286
           ++            + R+   DAI+ Y
Sbjct: 309 SMPYGEHTVEFGGKYARMSMFDAIKHY 335



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 469 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504


>gi|226324189|ref|ZP_03799707.1| hypothetical protein COPCOM_01968 [Coprococcus comes ATCC 27758]
 gi|225207738|gb|EEG90092.1| hypothetical protein COPCOM_01968 [Coprococcus comes ATCC 27758]
          Length = 650

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 127/286 (44%), Gaps = 30/286 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V L+G +   R  G   F +++D  G  Q     DS   E  K+ +   +  I GL 
Sbjct: 61  GKHVVLAGRMMSKRVMGKASFCNVQDLQGNIQSYVARDSIGEEEYKAFKKMDIGDIVGL- 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
                E       TG+I + A  +++LS + ++ LP           R++ R++DL  + 
Sbjct: 120 ---EGEVFKTK--TGEISIHASAVKLLSKSLQI-LPEKFHGLTNTDTRYRQRYVDLIMNP 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +    +KR++I+ ++R  +  E F+E  TP+L  ++   A      +R  +  F AL +
Sbjct: 174 EVKDTFIKRSKILTAIRKYLGNEGFMEVETPMLVQNAGGAA------ARPFETHFNALNE 227

Query: 197 ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                 + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   ++
Sbjct: 228 DLKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYHGMM 286

Query: 251 NTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
           +  EN+ R V +E      +            F RI   DA+++Y 
Sbjct: 287 DLTENLYRFVAQEVLGTTQIVYKGIEMDLGKPFERITMVDAVKKYA 332



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 29/41 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+ MLL GA+ +R+V LFP  ++ 
Sbjct: 458 ALEIGMPPTGGIGFGIDRMCMLLTGAEAIRDVLLFPTMKSL 498


>gi|304436292|ref|ZP_07396270.1| lysine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370697|gb|EFM24344.1| lysine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 501

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 20/259 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SACFEIAKSVRS 67
           L   + G  VR++G +  +R HG   F  + D  G  QV    D        E  K +  
Sbjct: 56  LAEDEEGKEVRIAGRLMAIRGHGKASFSTLNDRTGNIQVYFKLDVLGEQKYKEEFKRLDI 115

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRF 126
             ++ I G+V              G++ +  +  ++L+ A   LP    G ++     R+
Sbjct: 116 GDIIGIRGVVFKTR---------RGEVTVRVEDFDLLAKALRPLPEKFHGLKDV--DTRY 164

Query: 127 KYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL     + +   KRT I+ S+R  + A +F+E  TP+L T +    AR F+   
Sbjct: 165 RQRYLDLMVNQEVRETFRKRTAILQSIRRYLDARDFLEVETPVLSTLAGGAAARPFVTHH 224

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  A +   + L+  G DR +++   FR+E       P EF  +++  +F 
Sbjct: 225 NALDIDLY-LRIATELSLKRLIVGGLDRVYEMGRVFRNEGMDVRHNP-EFTSIEIYQAFA 282

Query: 245 EQDDILNTMENVLRGVFEE 263
           +  D++   E ++R   E+
Sbjct: 283 DHRDLMAITEGIVRQAAED 301



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 29/43 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + G+PP GG+  GIDR+VMLL  + ++R+V LFP  +   +
Sbjct: 459 ALEYGLPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPTMKPLAE 501


>gi|242240699|ref|YP_002988880.1| lysyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242132756|gb|ACS87058.1| lysyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 505

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 132/298 (44%), Gaps = 25/298 (8%)

Query: 5   RTHSCGDLGVSD----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           R H+  D   +D    +G  V ++G +   R  G   F+ ++D  G  Q+  + D     
Sbjct: 48  RLHAGYDAKDNDELEALGLEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEG 107

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP       
Sbjct: 108 VYNEQFKKWDL---GDILGARGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLA 161

Query: 121 PESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-- 177
            +  R++ R+LDL   D   +    R++I+  +R  M+  +F+E  TP++    P GA  
Sbjct: 162 DQETRYRQRYLDLIANDDSRQTFRVRSQILAGIRQFMVGRDFMEVETPMMQVI-PGGASA 220

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +
Sbjct: 221 RPFITHHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMM 278

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286
           ++ M++ +  D++   E++ R + ++      V            F ++   +AI++Y
Sbjct: 279 ELYMAYADYKDLIELTESLFRTLAQDVLGTTEVPYGDQTFDFGKPFEKLTMREAIKKY 336



 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F +   +K+  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRLVMLFTNSHTIRDVILFP 499


>gi|299530673|ref|ZP_07044088.1| lysyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298721189|gb|EFI62131.1| lysyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 514

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 119/273 (43%), Gaps = 32/273 (11%)

Query: 31  RPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGLVMSRSAETIN 86
           R  G   F  ++D  G  Q     D+   E+    + +W    ++ ++G +M        
Sbjct: 86  RVMGKASFATVQDATGRIQAYVTRDAVGEEVYADFK-KWDLGDIISVEGQLMKTK----- 139

Query: 87  ANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVK 144
               TG++ + A KI +L+ +   +P    G  +  + +R   R++DL  D    K  V 
Sbjct: 140 ----TGELSIKATKIRLLTKSLRPMPDKFHGMADLEQKVR--QRYVDLMTDEEARKRFVA 193

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYK 202
           R++ +  +R  M+   F+E  TP+L    P GA  + F+          Y L  AP+ Y 
Sbjct: 194 RSKAVAGIRDFMVEHGFLEVETPMLH-PIPGGANAKPFITHHNALDQEMY-LRIAPELYL 251

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR---- 258
           + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D+++  E ++R    
Sbjct: 252 KRLIVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYQDLMDYTEKLIRDAAM 310

Query: 259 ---GVFEEFSNGNTV--SNNFLRICYDDAIRRY 286
              G  E    G  V  +  F R+   +AI +Y
Sbjct: 311 KAVGTLELSYGGKPVDLAKPFERLTIPEAIVKY 343



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR +MLL  + ++R+V LFP
Sbjct: 472 RALEYGMPPTGGCGIGIDRFMMLLTDSASIRDVILFP 508


>gi|139438509|ref|ZP_01772025.1| Hypothetical protein COLAER_01018 [Collinsella aerofaciens ATCC
           25986]
 gi|133776048|gb|EBA39868.1| Hypothetical protein COLAER_01018 [Collinsella aerofaciens ATCC
           25986]
          Length = 654

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 29/266 (10%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEIAKSVRSEWVLC 72
           D    V++ G V   R  G I+F+ IRD  G  Q+   + + D A +   K++    +L 
Sbjct: 61  DTEDVVKIGGRVVAKRGQGKIMFIVIRDATGEVQLFCRINDMDEAAWSTLKALDLGDILG 120

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G+V+             GQ+ ++ +   +LS A   PLP        +  R++ R++D
Sbjct: 121 VTGVVVRTK---------RGQLSVAPKSATLLSKAVR-PLPEKFHGLSDKETRYRQRYVD 170

Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGS 190
           L   D + +   KR++I+++ R  M ++ ++E  TPIL T      A+ F+         
Sbjct: 171 LIANDDVRETFRKRSQILSTFRRFMESDGYMEVETPILQTIQGGATAKPFIT-------H 223

Query: 191 FYALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           F AL Q      A + + +  +  GF+R F+I   FR+E       P EF  ++   +F 
Sbjct: 224 FNALDQECYLRIATELHLKRCIVGGFERVFEIGRIFRNEGMDLTHNP-EFTTMEAYRAFS 282

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTV 270
           + + +    + V++   +   N   +
Sbjct: 283 DLEGMKALAQGVIKAANKAIGNPEVI 308



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GGI  GIDR+VMLL    ++R+V LFP
Sbjct: 459 RALEYGMPPAGGIGIGIDRVVMLLTNQASIRDVLLFP 495


>gi|119193865|ref|XP_001247536.1| lysyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
 gi|303311735|ref|XP_003065879.1| Lysyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240105541|gb|EER23734.1| Lysyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320039790|gb|EFW21724.1| lysyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 609

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/253 (22%), Positives = 124/253 (49%), Gaps = 11/253 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           +R++G ++  R  G  +IF DIR      QV         ++    + E +   D + ++
Sbjct: 130 IRIAGRIYTKRSSGAKLIFYDIRAEGVKVQVACQAQETTSDVPFEAQHEHLRRGDIIGII 189

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A+++ +L+    ++P   +G ++  +  RF+ R+LDL  + 
Sbjct: 190 GFPGRTSPKNRDDGELSIFAKQVILLTPCLHQIPSEHYGFKD--QEQRFRQRYLDLIMND 247

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194
             +N+ + R++II+ +R      +F+E  TP++ A +    A+ F+   + ++   F  +
Sbjct: 248 KSRNVFITRSKIISYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHHNELDMNLFMRI 307

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  E
Sbjct: 308 --APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDLMNVTE 364

Query: 255 NVLRGVFEEFSNG 267
            ++ G+ +  + G
Sbjct: 365 ELVSGLVKHVTGG 377



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 25/40 (62%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + + G+PP GG   GIDR+VM L    +++EV  FP  ++
Sbjct: 543 SLEYGLPPTGGWGLGIDRLVMFLTDNYSIKEVLAFPFMKD 582


>gi|325095996|gb|EGC49306.1| lysyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 609

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 124/253 (49%), Gaps = 11/253 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           +R++G ++  R  G  +IF DIR      QV     +   +I    + E +   D + ++
Sbjct: 128 LRIAGRIYTKRSAGAKLIFYDIRAEGVKIQVACQAQNVKGDIPFEDQHEHLRRGDIVGIV 187

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A ++ +L+    ++P   +G R+  +  R++ R+LDL  + 
Sbjct: 188 GFPGRTAPKNRADGELSIFATEVVLLAPCLHQIPSEHYGLRD--QEQRYRQRYLDLIMND 245

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP-SRVNQGSFYAL 194
             +N+ V R+++I+ +R      +F+E  TP++ T +    A+ F+   + +N   F  L
Sbjct: 246 RSRNVFVTRSKMISYIRRFFDERDFVEVETPMMNTIAGGATAKPFITHHNDLNMDMF--L 303

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  DI+N  E
Sbjct: 304 RVAPELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDIMNVTE 362

Query: 255 NVLRGVFEEFSNG 267
            ++ G+ +  + G
Sbjct: 363 ELVSGLVKHITGG 375



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 541 SLEFGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576


>gi|242279993|ref|YP_002992122.1| lysyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242122887|gb|ACS80583.1| lysyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 508

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 136/296 (45%), Gaps = 31/296 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCI 73
           +G   +L+G V   R  G + F  ++D  G  QV A  D   +  ++I K      ++ +
Sbjct: 61  LGKKFKLAGRVITHRSFGKVAFFHLQDPTGRIQVYAARDDLGADLYKIFKKFDIGDIVGV 120

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLD 132
           +G +             T ++ + A K+++++ +   LP    G ++     R++ R++D
Sbjct: 121 EGTLFRTK---------TDELTVKADKVDLITKSMRPLPEKYHGLKDV--ETRYRQRYVD 169

Query: 133 LRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L      + I  KRT I+ ++R  + ++ F+E  TP++   +    AR F          
Sbjct: 170 LIVTPRAREIFQKRTLIVRAIRNYLDSKGFMEVETPMMHPIAGGAAARPFTTHHNALDMQ 229

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y + L+  GF++ ++I   FR+E       P EF  L+   ++   ++++
Sbjct: 230 LY-MRIAPELYLKRLLVGGFEKVYEINRNFRNEGISVRHNP-EFTMLEFYWAYANFENLM 287

Query: 251 NTMENVLRGVFEEFSNGNTVSN-----------NFLRICYDDAIRRYGTDKPDLRN 295
           +  E ++  V +E  NG+TV +            + R+ + +++ + G   P++ N
Sbjct: 288 DLTEEMISSVCKEV-NGDTVIDYQDERIDLTPGAWHRMAFHESLEKVGGVSPEVYN 342



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL  + ++REV LFP+
Sbjct: 459 RALEYGMPPAAGQGIGIDRLVMLLTDSASIREVILFPL 496


>gi|237729830|ref|ZP_04560311.1| lysyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226908436|gb|EEH94354.1| lysyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 505

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 128/288 (44%), Gaps = 21/288 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  K R++I+  +R  M+   F+E  TP++        AR F+          Y L  AP
Sbjct: 182 NTFKVRSQIMAGIRQFMVGRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R
Sbjct: 241 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 259 GVFE------EFSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295
            + +      E   G  V      F ++   +AI++Y   T+  DL N
Sbjct: 300 TLAQNVLGTTEVPYGEEVFDFGKPFEKLTMREAIQKYRPETNMADLDN 347



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 464 ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|197335462|ref|YP_002155208.1| lysyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|226710932|sp|B5F9U5|SYK_VIBFM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|197316952|gb|ACH66399.1| lysyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 501

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 18/247 (7%)

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
           AK V+ E      GL +        A   +G+ +L     E + + + L PLP       
Sbjct: 92  AKEVQKELKDKYQGLDIGDIIGVKGALHKSGKGDLYVNMEEYVLLTKALRPLPEKFHGLT 151

Query: 121 PESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA- 177
            + +R++ R++DL    D+ H  IV R++++ ++R  M+ + F+E  TP++    P GA 
Sbjct: 152 DQEMRYRQRYVDLIVNDDSRHAFIV-RSKVVAAIRNFMVDKGFMEVETPMMHVI-PGGAS 209

Query: 178 -RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
            R F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  
Sbjct: 210 ARPFVTHHNALDVDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTM 267

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
           ++  M++ + +D+++  E +L  V       + +            + R+   DAI++Y 
Sbjct: 268 MEFYMAYADYNDLMDLTEEMLSTVATSVLGSDKMPYGEHTVDFGGKYARMSMLDAIKQYN 327

Query: 288 TDKPDLR 294
            D  +++
Sbjct: 328 PDHSEIQ 334



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 460 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 495


>gi|222823513|ref|YP_002575087.1| lysyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|222538735|gb|ACM63836.1| lysyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 500

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 124/278 (44%), Gaps = 23/278 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVMS 79
           L+G +  +R  G  +F +I D     Q+  N +      F I K       L +  +V+ 
Sbjct: 60  LAGRLKLLRIAGKSVFANIEDEQDNLQIYFNQNILGEEYFAILKKY-----LEVGDIVLV 114

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-L 138
           +    +     TG+  L  ++I+I + A  +PLP           R++ R+LD+  ++ +
Sbjct: 115 KGFPFMTK---TGEFSLHVEQIQIATKAI-VPLPEKYHGLTDIEQRYRKRYLDMIMNSEV 170

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
            K+ + R++I++ +R     + F+E  TP++   +        V      G    L  AP
Sbjct: 171 RKDFILRSKIVSYIRSFFDNKGFLEVETPMMHPIAGGANAKPFVTYHNALGVERFLRIAP 230

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+  ++I  CFR+E       P EF  ++   ++    D+++  E +  
Sbjct: 231 ELYLKRLIVGGFEAVYEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYHDLMDLTEELFA 289

Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
            + ++ +    +         S +F RI Y DA+++YG
Sbjct: 290 MLLDKLNLDKKLEFDEKIIDFSKSFERITYKDALKKYG 327



 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A    M P  G   GIDR+VMLL+  K++R+V LFP
Sbjct: 453 ALGYAMAPTAGQGIGIDRLVMLLINKKSIRDVVLFP 488


>gi|311256989|ref|XP_003126904.1| PREDICTED: lysyl-tRNA synthetase-like [Sus scrofa]
          Length = 583

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 120/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 126 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVRINNKLRRGDIIGVQ 185

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 186 G---------SPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 234

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  + A  F+E  TP++    P GA  + F+        +
Sbjct: 235 ILNDFVRQKFIIRSKIITYIRSFLDALGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 293

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 294 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 351

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 352 EITEKMVSGMVKHITGSYKVT 372



 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 522 ALEYGLPPTGGWGMGIDRVTMFLTDSNNIKEVLLFP 557


>gi|241833933|ref|XP_002414971.1| asparaginyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215509183|gb|EEC18636.1| asparaginyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 464

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 114/280 (40%), Gaps = 50/280 (17%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V+L GWVH +R  G  ++FL +RD  G  Q V N +      A  + +E  +C+ G+
Sbjct: 70  GKRVKLFGWVHFLRRQGRSLMFLLVRDGTGFLQCVLNDELCHTYNALVLTTESTVCVYGV 129

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           + +         ++ G+ E                            I    R L +R +
Sbjct: 130 LKA---------VLEGKTESHV------------------------DIMLDNRHLAIRGE 156

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T  K +  ++ ++   R    +++++E   P +  +  EG       +   + ++  L Q
Sbjct: 157 THSKIMFAKSAVMQCFRDYYFSKHYVEVIPPTMVQTQVEGGSTLFSFNYFGEEAY--LTQ 214

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y + ++ S  D  F +A  +R E  R+ R   EF  ++ E  F+  D+ L+ +E++
Sbjct: 215 SSQLYLETVIPSLGD-VFCVAQSYRAEQSRTRRHLSEFTHIEAECPFLTFDEFLDRIEDL 273

Query: 257 LRGVFEEFSNGNTV-------------SNNFLRICYDDAI 283
           + GV E                        FLR+ Y +AI
Sbjct: 274 VVGVCERILKSPAAEAVLELNPEFKVPERPFLRMQYSEAI 313



 Score = 40.4 bits (93), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 13/86 (15%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHG 537
           DL+  G  EI  G +R   +E ++QAF   GI        ++ R        + G  PHG
Sbjct: 379 DLLMPGVGEIVGGSMRMWDAEELVQAFQRKGIDPTPYYWYIDQR--------KYGTCPHG 430

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G +R V  +L   ++R+V L+P
Sbjct: 431 GYGMGFERFVTWVLKRHHIRDVCLYP 456


>gi|238023019|ref|ZP_04603445.1| hypothetical protein GCWU000324_02941 [Kingella oralis ATCC 51147]
 gi|237865402|gb|EEP66542.1| hypothetical protein GCWU000324_02941 [Kingella oralis ATCC 51147]
          Length = 527

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 130/278 (46%), Gaps = 22/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  ++D  G  Q+  N      E+  +  + W +   G ++  
Sbjct: 92  VKIAGRMMLKRQMGKASFATVQDATGQIQLYLNNKGVSQEVLDAF-NHWDM---GDIIG- 146

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
            AE +      G++ +   +I +LS +   PLP   +    +  +++ R++DL  +   +
Sbjct: 147 -AEGVLFKTNHGELTVRVSQIRLLSKSLR-PLPDKHKGLSDQETKYRQRYVDLIANADSR 204

Query: 141 NI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQA 197
           ++ +KR++II ++R  M++E ++E  TP++    P G  A+ F+          Y L  A
Sbjct: 205 DVFIKRSKIIQAVRNFMVSEQYLEVETPMMH-PIPGGATAKPFVTHHNALDIPLY-LRIA 262

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F + + ++   E+ +
Sbjct: 263 PELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAFCDYNRMMQMAEDTI 321

Query: 258 RGVFEEFS-------NGNTV--SNNFLRICYDDAIRRY 286
           R      S       NG  V   + F R+    AI++Y
Sbjct: 322 RAACRSVSGSLKIEYNGKEVDLESPFERLTILQAIKKY 359



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL   + +R+V LFP
Sbjct: 486 RAMEYGLPPTGGCGIGIDRLVMLLTDTQTIRDVILFP 522


>gi|171920720|ref|ZP_02695465.2| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|185178848|ref|ZP_02554646.2| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188024429|ref|ZP_02570729.2| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188518484|ref|ZP_03003968.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|195867438|ref|ZP_03079442.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|209554339|ref|YP_002284482.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225550679|ref|ZP_03771628.1| lysine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551351|ref|ZP_03772297.1| lysine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|226710931|sp|B5ZAP2|SYK_UREU1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|171903464|gb|EDT49753.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|184209484|gb|EDU06527.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018717|gb|EDU56757.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188998068|gb|EDU67165.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|195660914|gb|EDX54167.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|209541840|gb|ACI60069.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225379166|gb|EEH01531.1| lysine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225379833|gb|EEH02195.1| lysine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 493

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 121/259 (46%), Gaps = 16/259 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y+  S  +L   D+   V L+G +  VR   GII  D      I     N D   F   K
Sbjct: 45  YKNFSKEELHNMDLKK-VTLAGRLIGVRQTFGII-QDFSTKLQIYIDKKNVDPEVFSTFK 102

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+    ++ + G+ M  +++ I  N+    I+L A+ +++L      P    G  +  E 
Sbjct: 103 SLDIGDIVELQGVAMKTNSDEITLNVTN--IKLVAKSLKVL------PEKYHGLVD--EE 152

Query: 124 IRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFL 181
           I+ + R+LDL  +   KN  +KR+ II  MR  + ++ F E  TP+L    S   AR F+
Sbjct: 153 IKARQRYLDLIVNDESKNTFIKRSLIIREMRNWLDSQGFFEVETPVLQDILSGAAARPFI 212

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                    +Y L  A +   +  +  GF++ ++I   FR+E   S   P EF  +++ +
Sbjct: 213 THHNTLDKQYY-LRIATEIALKKCIVGGFEKVYEIGRIFRNEGMDSTHNP-EFTSVELYV 270

Query: 242 SFVEQDDILNTMENVLRGV 260
           ++V+   I+   E+++R +
Sbjct: 271 AYVDLWYIMQLTEDLIRHI 289



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VMLL    ++R V LFP
Sbjct: 451 ALEYGMPPTGGLGIGVDRLVMLLTSNDSIRNVLLFP 486


>gi|114561769|ref|YP_749282.1| lysyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122300806|sp|Q087X1|SYK_SHEFN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|114333062|gb|ABI70444.1| lysyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 500

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 106/225 (47%), Gaps = 24/225 (10%)

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--------RFKYRFLDLRRDTLHKN 141
           + GQ+ LS  K ++    EE  L     R  PE          R++ R++DL  +   +N
Sbjct: 113 VKGQLHLSG-KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEDSRN 171

Query: 142 -IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
             + R++++ ++R  M+ + F+E  TP++    P GA  R F+        + Y L  AP
Sbjct: 172 AFIMRSKVVAAIRNFMVKKEFMEVETPMMHVI-PGGASARPFVTHHNALDMAMY-LRIAP 229

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L 
Sbjct: 230 ELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLG 288

Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDLR 294
            + +E     ++            + R+   +AI++Y  D   ++
Sbjct: 289 SIAQELLGSTSMPYGEETVEFGGAYARLSMLEAIQKYNPDNATIQ 333



 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|322389677|ref|ZP_08063225.1| asparagine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321143676|gb|EFX39106.1| asparagine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 448

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 75  SQETSVFVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDEAI 295



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 420 IERMVTFAAGTKHIREAIPFP 440


>gi|156398116|ref|XP_001638035.1| predicted protein [Nematostella vectensis]
 gi|156225152|gb|EDO45972.1| predicted protein [Nematostella vectensis]
          Length = 569

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 22/259 (8%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G +H  R  G  ++F D+R      QV+A+        A++   ++    D +   
Sbjct: 100 VTVAGRIHAKRASGSKLLFYDLRGEGSKLQVMAD--------ARASEQDFNAVHDKIRRG 151

Query: 80  RSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDL-RR 135
                      T + ELS     +  +A     LP   FG ++  +  RF+ R+LDL   
Sbjct: 152 DIIGVKGKPGKTKKGELSILPSSVTLLAPCLHMLPHLHFGLKD--KETRFRQRYLDLILN 209

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP-SRVNQGSFY 192
           D +    V R RIIN +R  +    F+E  TP++    P GA  + F+   + +N   F 
Sbjct: 210 DKVRDKFVTRARIINCIRRFLDQLGFLEVETPLMNMI-PGGATAKPFITHHNDLNMDLFM 268

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++  
Sbjct: 269 RV--APELYHKMLVVGGIDRVYEIGRQFRNESIDLTHNP-EFTTCEFYMAYADYNDLMEI 325

Query: 253 MENVLRGVFEEFSNGNTVS 271
            E ++ G+ +  + G  V+
Sbjct: 326 TETMISGMVKNITGGYKVT 344



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP  G   G+DR+ M L  + N++EV  FP
Sbjct: 512 SLEFGLPPTAGWGLGVDRLTMFLTDSNNIKEVLFFP 547


>gi|225009991|ref|ZP_03700463.1| lysyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005470|gb|EEG43420.1| lysyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 564

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 34/272 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-------PDSACFE--IAKSVRSE 68
           G  V +SG + R +  G   F +I+D  G  QV  N       PDS  +     K +   
Sbjct: 46  GKQVIVSGRLMRKKVQGKASFAEIQDSEGRIQVYFNRDEIDTTPDSQQYNEVFKKLIDLG 105

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP-------VFGEREY 120
            +L I+G + +            G+  +  +K  +LS A   LPLP       V  E   
Sbjct: 106 DILGIEGTLFTTQV---------GEKTVLVKKFTLLSKALRPLPLPKVDADGKVHDEFND 156

Query: 121 PESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--A 177
           PE +R++ R++DL  +   K+  +KRT+I NS+R     + ++E  TPIL    P G  A
Sbjct: 157 PE-LRYRQRYVDLIVNPQVKDTFIKRTKITNSIRKFFNDKGYLEVETPIL-QPIPGGASA 214

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R F+          Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +
Sbjct: 215 RPFITHHNALNMPLY-LRVANELYLKRLIVGGFDGVYEFSKDFRNEGMDRTHNP-EFTVM 272

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
           ++ +++ +   +++T E +L  +  E SNG++
Sbjct: 273 ELYVAYKDYHWMMDTTEKLLETIAME-SNGSS 303



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 7/95 (7%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQLR 585
           RA + GMPP  GI  GIDR+VML+    +++EV  FP M      + +     + +E L+
Sbjct: 455 RALEYGMPPTSGIGIGIDRLVMLMTNNASIQEVLFFPQMRPEKKAVELSENEKIVLELLK 514

Query: 586 ELGLRIVENPKKILKISVTTILRNVYGLKIIHSIT 620
           +       NP  +L +   + L N    K I S+T
Sbjct: 515 KT------NPMPLLDLKEASGLSNKAWDKTIKSLT 543


>gi|145611736|ref|XP_369083.2| hypothetical protein MGG_00161 [Magnaporthe oryzae 70-15]
 gi|145018989|gb|EDK03268.1| hypothetical protein MGG_00161 [Magnaporthe oryzae 70-15]
          Length = 537

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 114/259 (44%), Gaps = 21/259 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS-VRSEWVL 71
           G+ D+   +   G +  +R HG +IFLDI   Y   QV     S  F   KS    E V 
Sbjct: 24  GIEDIDEPLTAKGRIMNIRSHGSLIFLDIAGDYETLQVAI---SYAFLKEKSPAEMEGVS 80

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSV---------AEELPLPVFGEREYPE 122
             D    ++ A+    + +     + A + + L +         A+ L +P     +  +
Sbjct: 81  LRD--FKAKGAQLQRGDWVVAAGHMEADRRDGLRMRAHNFPSIRAKALNIPPLSVID--D 136

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDF 180
            +  + R LDL  + +  + ++ R RII ++R  +    ++E  TP+L  S+    AR F
Sbjct: 137 GLMSQSRHLDLMLNKVSVDALRARARIIQTVRRTLDDRGYVEVQTPLLAGSAGGATARPF 196

Query: 181 -LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               +        AL  AP+ + + L+  G DR +++ PCFR+E   +   P EF   + 
Sbjct: 197 ATTATEFGSSQHLALRVAPELWLKRLVMGGMDRVYEVGPCFRNEGVDATHNP-EFTMCEF 255

Query: 240 EMSFVEQDDILNTMENVLR 258
             ++ + D ++   E +++
Sbjct: 256 YEAWADLDHLMLMTERLMQ 274



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 21/35 (60%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           A + GMPP GG   GIDR+ ML  G   +R+V  F
Sbjct: 478 AMRGGMPPTGGWGCGIDRLAMLFTGKPRIRDVLTF 512


>gi|296134907|ref|YP_003642149.1| lysyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295795029|gb|ADG29819.1| lysyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 506

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 127/293 (43%), Gaps = 32/293 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR----SEWVLC 72
            G  VR++G +   R  G   F  ++D  G  Q+  + D    E   + +     +W+ C
Sbjct: 62  AGVRVRVAGRMMLKRVMGKASFATLQDGTGRIQIHVSNDVTGEEAHAAFKHYDLGDWIGC 121

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFL 131
              L  +R          TG++ + A+++ +L V    PLP  F   E  E+ R++ R++
Sbjct: 122 EGVLFKTR----------TGELTIRAEQVRLL-VKSLRPLPDKFHGLEDVET-RYRQRYV 169

Query: 132 DL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL       +    R++ I ++R  M+A  F+E  TP+L        A+ F+        
Sbjct: 170 DLIVTPESRERFALRSKAIAALRNEMLAAGFMEVETPMLHPIPGGAAAKPFITHHNALDQ 229

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D 
Sbjct: 230 QMY-LRIAPELYLKRLLVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYAAWWTYRDQ 287

Query: 250 LNTMENVLRGVFEEFSNGNTV----------SNNFLRICYDDAIRRYGTDKPD 292
           ++  E ++R    + + G  V          S  F R+    AI+++  D  D
Sbjct: 288 MDFTEALIRNT-AQLTCGTAVLTHQGRTLDLSAPFARLTLTQAIQKHAPDYTD 339



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F +   +KE  ++    F   Y +A + GMPP 
Sbjct: 414 RFELFITGREIANGFSELNDPEDQAARFQSQVQAKEAGDDEAMYFDADYVQALEYGMPPA 473

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  A ++R+V LFP
Sbjct: 474 GGCGIGIDRLVMLLTDAPSIRDVILFP 500


>gi|260822036|ref|XP_002606409.1| hypothetical protein BRAFLDRAFT_118529 [Branchiostoma floridae]
 gi|229291750|gb|EEN62419.1| hypothetical protein BRAFLDRAFT_118529 [Branchiostoma floridae]
          Length = 478

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 101/240 (42%), Gaps = 10/240 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-AKSVRSEWV 70
             ++  S V++  W HR+R  G  ++F+ +RD  G  Q V N D+ C    A  + +E  
Sbjct: 130 ATANRNSRVKVKAWCHRIRRQGKNLMFIVLRDGTGFLQCVLN-DTLCHTYNALVLSTEST 188

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           +CI G++     E        G  EL A   E++ +A           E    ++   R 
Sbjct: 189 VCIYGVI----KEVPAGQQAPGGHELHADYWELIGLAPPGGADNLINEESHVDVQLDNRH 244

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           + +R + + K +  R+ ++   R       + E + P L  +  EG           + +
Sbjct: 245 MMIRGENMSKVMKMRSVVMQCFREHYFNRGYCEVTPPTLVQTQVEGGSTLFTLDYFGEQA 304

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +  + S  D  F IA  +R E  R+ R   E+  ++ E  F+  DD+ 
Sbjct: 305 Y--LTQSSQLYLETCLPSMGD-VFCIAESYRAELSRTRRHLAEYTHIEAECPFISFDDLF 361


>gi|307706198|ref|ZP_07643015.1| asparaginyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307618388|gb|EFN97538.1| asparaginyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 447

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F+I K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFLEKFGEEVGLEKFDIIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  ++ L+  E     +L+GV +                   +S  F RI YD AI
Sbjct: 238 YLTHNESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYISEPFKRISYDQAI 294



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|264677131|ref|YP_003277037.1| lysyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262207643|gb|ACY31741.1| lysyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 514

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 119/273 (43%), Gaps = 32/273 (11%)

Query: 31  RPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGLVMSRSAETIN 86
           R  G   F  ++D  G  Q     D+   E+    + +W    ++ ++G +M        
Sbjct: 86  RVMGKASFATVQDATGRIQAYVTRDAVGEEVYADFK-KWDLGDIISVEGQLMKTK----- 139

Query: 87  ANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVK 144
               TG++ + A KI +L+ +   +P    G  +  + +R   R++DL  D    K  V 
Sbjct: 140 ----TGELSIKATKIRLLTKSLRPMPDKFHGMADLEQKVR--QRYVDLMTDEEARKRFVA 193

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYK 202
           R++ +  +R  M+   F+E  TP+L    P GA  + F+          Y L  AP+ Y 
Sbjct: 194 RSKAVAGIRDFMVEHGFLEVETPMLH-PIPGGANAKPFITHHNALDQEMY-LRIAPELYL 251

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR---- 258
           + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D+++  E ++R    
Sbjct: 252 KRLIVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYQDLMDYTEKLIRDAAM 310

Query: 259 ---GVFEEFSNGNTV--SNNFLRICYDDAIRRY 286
              G  E    G  V  +  F R+   +AI +Y
Sbjct: 311 KAVGTLELSYGGKPVDLAKPFERLTIPEAIVKY 343



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR +MLL  + ++R+V LFP
Sbjct: 472 RALEYGMPPTGGCGIGIDRFMMLLTDSASIRDVILFP 508


>gi|294338844|emb|CAZ87178.1| Lysyl-tRNA synthetase, heat inducible (Lysine--tRNA ligase) (LysRS)
           [Thiomonas sp. 3As]
          Length = 509

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 127/293 (43%), Gaps = 32/293 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR----SEWVLC 72
            G  VR++G +   R  G   F  ++D  G  Q+  + D    E   + +     +W+ C
Sbjct: 65  AGVRVRVAGRMMLKRVMGKASFATLQDGTGRIQIHVSNDVTGEEAHAAFKHYDLGDWIGC 124

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFL 131
              L  +R          TG++ + A+++ +L V    PLP  F   E  E+ R++ R++
Sbjct: 125 DGVLFKTR----------TGELTIRAEQVRLL-VKSLRPLPDKFHGLEDVET-RYRQRYV 172

Query: 132 DL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL       +    R++ I ++R  M+A  F+E  TP+L        A+ F+        
Sbjct: 173 DLIVTPESRERFALRSKAIAALRNEMLAAGFMEVETPMLHPIPGGAAAKPFITHHNALDQ 232

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D 
Sbjct: 233 QMY-LRIAPELYLKRLLVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYAAWWTYRDQ 290

Query: 250 LNTMENVLRGVFEEFSNGNTV----------SNNFLRICYDDAIRRYGTDKPD 292
           ++  E ++R    + + G  V          S  F R+    AI+++  D  D
Sbjct: 291 MDFTEALIRNT-AQLTCGTAVLTHQGRTLDLSAPFARLTLTQAIQKHAPDYTD 342



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F +   +KE  ++    F   Y RA + GMPP 
Sbjct: 417 RFELFITGREIANGFSELNDPEDQAARFQSQVQAKEAGDDEAMYFDADYVRALEYGMPPA 476

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  A ++R+V LFP
Sbjct: 477 GGCGIGIDRLVMLLTDAPSIRDVILFP 503


>gi|325955983|ref|YP_004286593.1| lysyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325332548|gb|ADZ06456.1| lysyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 515

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 23/259 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      ++I K       L IDG V
Sbjct: 61  TKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIDGEV 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--R 134
           M            TG++ + A  +  LS A   LP    G ++  E+I ++ R+LDL   
Sbjct: 121 MKTD---------TGELTIRALHVTFLSKALRPLPDKYHGLKDV-EAI-YRQRYLDLITN 169

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
           RD+ +   V RT+II ++R  +  +NF+E  TP+L  + P G  AR F+        + Y
Sbjct: 170 RDS-YMRFVHRTQIIQAIRDYLNGQNFLEVETPVL-HNIPGGAEARPFITHHNALDINLY 227

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                    K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++ 
Sbjct: 228 MRIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDYHDVMDE 285

Query: 253 MENVLRGVFEEFSNGNTVS 271
            E ++R   +  S+   ++
Sbjct: 286 AEGIIRAAAKVVSDDGKIT 304



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 454 RAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 490


>gi|258513605|ref|YP_003189827.1| lysyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777310|gb|ACV61204.1| lysyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 499

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 19/243 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEIAKSVRSEWVLCID 74
           G  V ++G +   R HG   F +++D  G  QV   + N  S  +E+ + +    ++ + 
Sbjct: 60  GQEVSVAGRLMAKRGHGKAGFANLQDTAGSIQVYGRLNNLGSEDYELFQKLDIGDIIGVK 119

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
           G V              G+I +  Q + +LS +   LP    G R+    +R++ R++DL
Sbjct: 120 GKVFRTQ---------KGEITVEIQVLTLLSKSLRPLPEKWHGLRDV--ELRYRQRYVDL 168

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   KN  V R++I+  +R  +  + F+E  TP++ + +    AR F+          
Sbjct: 169 IVNPEVKNQFVARSQIVRCIRNLLDEKGFLEVETPMMQSIAGGAAARPFITHHNALDMEL 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFD+ ++I   FR+E   +   P EF  L++  ++ +  D++ 
Sbjct: 229 Y-LRIAPELYLKRLLVGGFDKVYEINRNFRNEGISTKHNP-EFTMLELYQAYADYYDMME 286

Query: 252 TME 254
             E
Sbjct: 287 MAE 289



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 14/95 (14%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG---------LYRAF 529
            ++++L   G E+A     N  SE+           K+V + R G            +A 
Sbjct: 405 TYRFELFIYGREMA-----NAFSELNDPIDQKARFQKQVEQRRSGDDEAHMMDEDYIQAL 459

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + GMPP GG+  GIDR+VMLL  A ++R++ LFP+
Sbjct: 460 EYGMPPAGGLGIGIDRLVMLLTNAASIRDIILFPL 494


>gi|171682808|ref|XP_001906347.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941363|emb|CAP67013.1| unnamed protein product [Podospora anserina S mat+]
          Length = 914

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 16/174 (9%)

Query: 103 ILSVAEELPLPVFG--------EREYPES-----IRFKYRFLDLRRDTLHKNIVKRTRII 149
           ++ V E LP+ VF         E    ES     +R   R   LR  T        + I 
Sbjct: 204 VVPVKEHLPVDVFSIDLVEMDEESHQLESLASTRVRVANRLAYLRTPTAQSIFRINSGIC 263

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
           +  R  +    FIE  TP L  ++ E   +    +   + +F A  Q+PQ  KQL +++ 
Sbjct: 264 SIFRSVLEGHGFIEIHTPKLMPAATESGAEVFKVNYFGRTAFLA--QSPQLSKQLSISAD 321

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262
           F R F+I P FR ED  + R   E+  LD+EM+   +  + LN ++++++ +F+
Sbjct: 322 FGRVFEIGPVFRAEDSNTHRHLTEYTGLDLEMAINSDYHEALNIIDDMMKSIFK 375



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI +GG R H  +V+++     GI    ++    G    F+ G+ PH G   
Sbjct: 482 FDIFLRGQEITTGGQRIHKPDVLVERMKKAGIEPFGMQEYLQG----FEYGVLPHAGCGI 537

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RI+ L+L   ++R  SLFP
Sbjct: 538 GLERIIFLMLSLGDIRNASLFP 559


>gi|74316911|ref|YP_314651.1| lysyl-tRNA synthetase, class-2 [Thiobacillus denitrificans ATCC
           25259]
 gi|123745516|sp|Q3SKD9|SYK_THIDA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|74056406|gb|AAZ96846.1| lysyl-tRNA synthetase, class-2 [Thiobacillus denitrificans ATCC
           25259]
          Length = 501

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 22/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+L+G +   R  G   F  ++D  G  QV  + D    +  ++ +  W L   G  +  
Sbjct: 65  VQLAGRMMLKRVMGKASFATLQDMSGRIQVYVSNDLTGLDAHEAFK-RWDL---GDFVGV 120

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
           S      N   G++ + A+ + +LS A   PLP        +  +++ R+LDL   D   
Sbjct: 121 SGTLFKTN--KGELTIQAKSVRLLSKALR-PLPEKFHGLADQEQKYRQRYLDLITNDDAR 177

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQA 197
              V+R++II ++R  M    F+E  TP++    P G  A+ F+          + L  A
Sbjct: 178 STFVRRSKIIQAIREFMTGHGFLEVETPMM-HPIPGGAAAKPFVTHHNALDMELF-LRIA 235

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF++ F+I   FR+E   +   P EF  ++   ++ E   +++  E ++
Sbjct: 236 PELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNP-EFTMMEFYEAYREYRYLMDFTEALI 294

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286
           R      +   T+S           F R+   +A+R+Y
Sbjct: 295 RHTAVAATGSTTISYQGSTIELGTPFDRLTIVEAVRKY 332



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G E+A+G    + +E   + F     +KE  +           RA + G+PP 
Sbjct: 409 RFELFITGREMANGFSELNDAEDQAERFMEQVRAKEAGDEEAMHYDADFIRALEHGLPPT 468

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 469 GGCGIGIDRLVMLLTDSPSIRDVILFP 495


>gi|78044571|ref|YP_361162.1| lysyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|123756728|sp|Q3A9M2|SYK_CARHZ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|77996686|gb|ABB15585.1| lysyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 488

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 122/267 (45%), Gaps = 20/267 (7%)

Query: 5   RTHSCGDL---GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---C 58
           RTH+  ++       V   V+++G +   R HG   F  I+D  G  Q+ A  +      
Sbjct: 34  RTHTAKEILDNFEQLVDKTVKIAGRIMAKRGHGKASFAHIQDMSGKIQIYARQNELGIDA 93

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +++ + +    ++ + G V              G+I +     EIL+ +   PLP     
Sbjct: 94  YKLFEKLDIGDIIGVTGHVFKTQK---------GEITVWLSSFEILAKSLR-PLPEKWHG 143

Query: 119 EYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                +R++ R++DL  +  + +  + R+RI+ ++R  +  + F+E  TP++   +    
Sbjct: 144 LTDVELRYRQRYVDLIVNPEVRETFILRSRIVKTIREFLDQKGFLEVETPMMHPIAGGAA 203

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  AP+ Y + L+  GF++ ++I   FR+E   +   P EF  
Sbjct: 204 ARPFITHHNALDMKLY-LRIAPELYLKRLLVGGFEKVYEINRNFRNEGISTKHNP-EFTM 261

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263
           L++  ++ +  D+++  E ++  V E+
Sbjct: 262 LELYQAYADYHDMMDITEELITHVAEK 288



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL    ++R+V LFP+
Sbjct: 447 ALEYGMPPAGGLGIGIDRLVMLLTDQASIRDVILFPL 483


>gi|258544155|ref|ZP_05704389.1| lysine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520597|gb|EEV89456.1| lysine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 497

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 136/309 (44%), Gaps = 33/309 (10%)

Query: 2   HRYRTHSCGDL-----GVSDVGSF-----VRLSGWVHRVRPHGGIIFLDIRDHYGI-TQV 50
           H   TH    L     G+ D         +R++G +   R  G   F  I+D  G   Q+
Sbjct: 32  HARPTHKAAALHAAYHGIEDADQLLAAGEIRVAGRMMSKRVMGKASFTAIQDGSGARMQI 91

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
             + D    E+ +   +++     G ++S   +       TG++ + A  +E+L+ +   
Sbjct: 92  YLSRD----ELPEGRYADFKTWDVGDIISARGKLFRTQ--TGELTIHADDVELLTKSLR- 144

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP        +  R++ R++DL  +   +N  + R++I++ +R    A +F+E  TP++
Sbjct: 145 PLPEKYHGLSDQETRYRQRYVDLITNEDSRNTFIIRSKIVSYIRRFFEARDFLEVETPMM 204

Query: 170 TASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
               P GA  + F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   +
Sbjct: 205 H-PIPGGATAKPFITHHNALDMPLY-LRIAPELYLKRLVVGGFERVFEINRSFRNEGVST 262

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRIC 278
              P EF  L+   ++ +  D+++  E + +G+  E      ++           F R+ 
Sbjct: 263 RHNP-EFTMLEYYQAYADYHDLMDQTEELFQGLAREVLGSPQITYQGVAIDLGQPFARLT 321

Query: 279 YDDAIRRYG 287
             DAIR++ 
Sbjct: 322 MLDAIRQHA 330



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN---RFGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    + +E   + F     + +  ++    +   Y RA + GMPP 
Sbjct: 406 RFELFIGGREVANGFSELNDAEDQAERFRAQAAAFDAGDDEAMHYDADYIRALEYGMPPT 465

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  A ++R+V LFP
Sbjct: 466 AGEGIGIDRLVMLLTDAPSIRDVLLFP 492


>gi|168703151|ref|ZP_02735428.1| asparaginyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 494

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 133/339 (39%), Gaps = 81/339 (23%)

Query: 6   THSCGDLGVSD------VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDS 56
           + S   + VSD      VG  VRL GWV   R   GG  F+++ D    G  QVVA  + 
Sbjct: 27  SKSVDKISVSDARRAEAVGRHVRLQGWVRTRRDSKGGFSFIELNDGSCQGNVQVVAPGEL 86

Query: 57  ACFE-IAKSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPV 114
           A +E + K + +   + IDG V +  A+        GQ  E+ A  +E++  A+    P+
Sbjct: 87  ANYESVVKHLHTGASVRIDGEVKASPAK--------GQATEVLAASVELIGDADVNTYPL 138

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTAS 172
              ++   S  F      LR  T     V R R   S+          F    TP++TAS
Sbjct: 139 ---QKKGHSFEFLRGIAHLRPRTNTLGAVARVRHQVSISIHQFFHERGFYYVHTPVITAS 195

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQ------YKQ-------LLMASG---------- 209
             EGA      S ++       P+AP +      YKQ        L  SG          
Sbjct: 196 DCEGAGAMFRVSTID-------PEAPPKAEGKVDYKQDFFGKPAYLTVSGQLQGEAFACA 248

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL------------ 257
             + +   P FR E+  + R   EF+ ++ EM+F +  D ++  E  L            
Sbjct: 249 LGKIYTFGPTFRAENSNTPRHLAEFWMIEPEMAFYDLTDNMDLAEAFLKRIISDAMTYCL 308

Query: 258 -------------RGVFEEFSNGNTVSNNFLRICYDDAI 283
                        +G+FE+    N ++N F R+ Y + +
Sbjct: 309 EDLKFFAEKLENNKGLFEKLE--NVLNNGFKRVSYTEGV 345


>gi|158335177|ref|YP_001516349.1| asparaginyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158305418|gb|ABW27035.1| asparaginyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 463

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 128/308 (41%), Gaps = 47/308 (15%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  +++ GWV   R      FLD+ D   +   QVV N +   +E  ++++    L   G
Sbjct: 16  GESIKVQGWVRTKRELKEFAFLDVNDGSSLQGLQVVVNQNLPEYE--QTLK----LLNTG 69

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +S   E + +     ++EL A+ +++   A+    P+  +R   E +R     L  R 
Sbjct: 70  SSVSIEGELVASQGKNQRVELVAKAVQVWGTADLETYPLQKKRHSFEFLR-TIAHLRSRT 128

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           +TL      R     ++       +F+   TPI+TAS  EGA + L  + +N        
Sbjct: 129 NTLGSVFRIRNACSQAIHQFFQDRDFMWIHTPIITASDCEGAGEQLAVTSLNLQDVPLSE 188

Query: 188 ------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+  P       QL   +MAS F   +   P FR E+  + R   EF+ ++
Sbjct: 189 DQTVDYSQDFFGKPTYLTVSGQLEGEIMASAFCNVYTFGPTFRAENSNTSRHLAEFWMVE 248

Query: 239 MEMSFVEQDDILNTMENVLRGVFE----------EFSN----------GNTVSNN-FLRI 277
            E++F +    ++  E  L+ VF+          EF N           +T+ N+ F RI
Sbjct: 249 PEVAFCDLQGDMDLAEAFLKHVFKSVLEQCPEDFEFFNLRIDKSVLETADTIINSEFERI 308

Query: 278 CYDDAIRR 285
            Y +A+ +
Sbjct: 309 TYTEAVNQ 316


>gi|167947823|ref|ZP_02534897.1| aspartyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 128

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 45/81 (55%)

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           W+++FP +EW++   +    H+PFT P+     L  +D    K+  YD+V NG E+  G 
Sbjct: 9   WVVEFPMFEWDDNHDRWTPLHHPFTSPKLDQLELLESDPGGCKSRAYDMVLNGVELGGGS 68

Query: 496 IRNHMSEVMLQAFSNVGISKE 516
           IR H+ EV  + F  + IS E
Sbjct: 69  IRIHLQEVQQKMFKLLEISDE 89


>gi|332361017|gb|EGJ38821.1| asparagine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 448

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSN------------GNTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLDRAPQTLETLERDVELLKRYIAEPFKRVTYDEAI 295



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+  +  E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMEELGM--DTSEYEFYLDLRKY--GTVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|315444464|ref|YP_004077343.1| lysyl-tRNA synthetase (class II) [Mycobacterium sp. Spyr1]
 gi|315262767|gb|ADT99508.1| lysyl-tRNA synthetase (class II) [Mycobacterium sp. Spyr1]
          Length = 1101

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 19/225 (8%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEI 61
           +H+  +   ++ G+ V +SG V R R +GG++F  +RD    TQV     A  D    + 
Sbjct: 647 SHTIAEAIAAEEGTEVTVSGRVLRARDYGGVLFGQLRDWSAETQVALDNSALLDGTTTDF 706

Query: 62  AKSVRSEWVLCIDGLV-MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            ++V    ++ + G +  +RS    + +++  +  L  + +         PLP   +   
Sbjct: 707 TRTVDLGDLIEVTGTMGHTRSG---SWSVLVTRWRLIGKCLR--------PLPDKWKGLT 755

Query: 121 PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGAR 178
            +  R + R++DL  +T  + ++K R+ I++++R  ++ + F+E  TPIL        AR
Sbjct: 756 DQEARVRARYVDLAVNTDARELIKARSAILHAIRETLVGKGFLEVETPILQQIHGGANAR 815

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            FL          Y L  AP+ Y + L   G +R F++   FR+E
Sbjct: 816 PFLTHINAYDLDLY-LRIAPELYLKRLCVGGVERVFELGRAFRNE 859



 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +
Sbjct: 1009 AERWDLVAWGVELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAME 1064

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  G+DR+VML+ G +++RE   FP+++
Sbjct: 1065 YAMPPTGGLGMGVDRVVMLITG-RSIRETLPFPLAK 1099


>gi|148926492|ref|ZP_01810175.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145844655|gb|EDK21761.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 501

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 129/282 (45%), Gaps = 19/282 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +  +R  G  IF +I D     Q+  + DS   E+   ++    L +  +V+ +  
Sbjct: 60  VAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKN--LEVGDIVLVKGF 117

Query: 83  ETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDT-LHK 140
             +     TG+  L A ++++ + A   LP    G  +  +  R++ R++D+  +  + K
Sbjct: 118 PFVTK---TGEFSLHASEVKLATKAIVLLPEKYHGLTDIEQ--RYRKRYVDMIMNVEVRK 172

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           + + R+++++ +R     + F+E  TP++   +        V    + G    L  AP+ 
Sbjct: 173 DFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPEL 232

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF+  F+I  CFR+E       P EF  ++   ++    D+++  E +   +
Sbjct: 233 YLKRLIVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTEELFALL 291

Query: 261 FEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293
            ++ + G T+         S  F RI Y DA+ +YG    DL
Sbjct: 292 LDKLNLGKTIEFDGKMINFSKPFERITYKDALCKYGGLDRDL 333



 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL   K++R+V LFP
Sbjct: 453 ALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFP 488


>gi|145224128|ref|YP_001134806.1| lysyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|296439666|sp|A4T9U2|LYSX_MYCGI RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|145216614|gb|ABP46018.1| lysyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
          Length = 1101

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 19/225 (8%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEI 61
           +H+  +   ++ G+ V +SG V R R +GG++F  +RD    TQV     A  D    + 
Sbjct: 647 SHTIAEAIAAEEGTEVTVSGRVLRARDYGGVLFGQLRDWSAETQVALDNSALLDGTTTDF 706

Query: 62  AKSVRSEWVLCIDGLV-MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            ++V    ++ + G +  +RS    + +++  +  L  + +         PLP   +   
Sbjct: 707 TRTVDLGDLIEVTGTMGHTRSG---SWSVLVTRWRLIGKCLR--------PLPDKWKGLT 755

Query: 121 PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGAR 178
            +  R + R++DL  +T  + ++K R+ I++++R  ++ + F+E  TPIL        AR
Sbjct: 756 DQEARVRARYVDLAVNTDARELIKARSAILHAIRETLVGKGFLEVETPILQQIHGGANAR 815

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            FL          Y L  AP+ Y + L   G +R F++   FR+E
Sbjct: 816 PFLTHINAYDLDLY-LRIAPELYLKRLCVGGVERVFELGRAFRNE 859



 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +
Sbjct: 1009 AERWDLVAWGVELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAME 1064

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  G+DR+VML+ G +++RE   FP+++
Sbjct: 1065 YAMPPTGGLGMGVDRVVMLITG-RSIRETLPFPLAK 1099


>gi|301784689|ref|XP_002927769.1| PREDICTED: lysyl-tRNA synthetase-like [Ailuropoda melanoleuca]
          Length = 597

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 126 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQ 185

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 186 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 234

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 235 ILNDFVRQKFIIRSKIITYIRTFLDELGFLEIETPMMNVI-PGGAVAKPFITYHNELDMN 293

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 294 LY-MRVAPELYHKILVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 351

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 352 EITEKMISGMVQHITGSYKVT 372



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDRI M L  + N++EV LFP
Sbjct: 536 ALEYGLPPTAGWGMGIDRITMFLTDSNNIKEVLLFP 571


>gi|301114479|ref|XP_002999009.1| asparaginyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262111103|gb|EEY69155.1| asparaginyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 513

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 127/319 (39%), Gaps = 53/319 (16%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +  D    D GS V + GWV  VR H  + F+++ D   + ++     SA  E A  
Sbjct: 36  RRSTIRDAREQDSGSRVAVGGWVKSVRKHKSVSFVNVNDGSCLGELQITLPSAEAEGAS- 94

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITG------------QIELSAQKIEILSVAEELPL 112
                    DG +   +  T+ +++               ++EL   K++IL   +    
Sbjct: 95  ---------DGPLAKIADITVGSSVFAEGELREVPGGKQRRLELHPSKLKILGKCDTQAY 145

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILT 170
           P+  +++Y  S+ F    L LR  T     V R R  +   +       +F+   +PILT
Sbjct: 146 PL--QKKY-HSLEFLREKLHLRARTNTFGAVTRVRNALGQGLHSYFQENDFLHLHSPILT 202

Query: 171 ASSPEGARDFLVPSRVN--QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDP 225
           ++  EGA +    ++++     F+  P       QL   + AS   + +   P FR E+ 
Sbjct: 203 SNDCEGAGEMFRIAKIDGKDEEFFGTPTYLTVSGQLHAEMYASALSKVYTFGPTFRAENS 262

Query: 226 RSDRLPGEFYQLDMEMSFV--------EQDDILNTMENVLRGVFEE--FSNGN------- 268
            + R   EF+ ++ EM+F          Q  +  ++ + L    E+  F N N       
Sbjct: 263 NTTRHLAEFWMVEPEMAFAGLEECVASAQGAVQRSVSHALNTCAEDIAFFNKNYDKKIAE 322

Query: 269 ----TVSNNFLRICYDDAI 283
                V   F R+ Y +AI
Sbjct: 323 RLQRVVEKEFARLTYTEAI 341


>gi|156973279|ref|YP_001444186.1| lysyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166230600|sp|A7MXL2|SYK_VIBHB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|156524873|gb|ABU69959.1| hypothetical protein VIBHAR_00960 [Vibrio harveyi ATCC BAA-1116]
          Length = 510

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 116/243 (47%), Gaps = 25/243 (10%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIIN 150
           G + ++ ++ E+L+ A   PLP        + +R++ R++DL   +   +  V R+++++
Sbjct: 133 GDLYVNMEEFELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMS 191

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI + F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 192 AIRNFMITKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++  M++ +  ++++  E +L  V  E     
Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKELMDLTEELLSSVALEVLGST 308

Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSEF 311
           ++            + R+   +AI+ Y  D        + D++N  +M ++ +  VH E 
Sbjct: 309 SMPYGDDTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKS-VHVEV 367

Query: 312 RVF 314
             F
Sbjct: 368 ESF 370



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 469 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504


>gi|242776859|ref|XP_002478916.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218722535|gb|EED21953.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 578

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 116/283 (40%), Gaps = 25/283 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VHR+R    +IF+ + D YG  Q +   D        ++  E  + I G +
Sbjct: 153 GTRVRVLGRVHRLRSQKDVIFITLYDGYGYLQCIMTGDMVKTYDMMTLTLETSIAIHGEM 212

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLR 134
            +   +    N      EL A   +I+  A   +E           P+++ +  R L LR
Sbjct: 213 RAVPPKQHAPN----DRELHADYFKIIGKAAGDKEAITSRVAPDADPQTL-YDNRHLVLR 267

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +T    +  R   + + R    A   +E + P +  +  EG           + ++  L
Sbjct: 268 GETSSSVMKVRAATLRAFRRTFEATRMLEVTPPSMVQTQVEGGSTLFSFDYYGEPAY--L 325

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y +  +AS  D  F I P FR E   + R   E+  ++ E+ F+  DD+L  +E
Sbjct: 326 TQSSQLYLETCLASLGD-VFCICPSFRAEKSLTRRHLSEYTHIEAELDFITFDDLLEHLE 384

Query: 255 NVLRGVFEE-FSNGNTV-------------SNNFLRICYDDAI 283
            V+  V  E  ++  T              S  F R+ Y DAI
Sbjct: 385 EVISTVIGELLADEQTAKLIKDLNPDFKVPSRPFKRMRYSDAI 427


>gi|299141528|ref|ZP_07034664.1| asparagine--tRNA ligase [Prevotella oris C735]
 gi|298576864|gb|EFI48734.1| asparagine--tRNA ligase [Prevotella oris C735]
          Length = 465

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 121/279 (43%), Gaps = 34/279 (12%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSAC 58
           M   RT     L  ++ G  + + GWV   R    + F+ + D   I   Q+V +P S  
Sbjct: 1   MKMKRTKVIDALQCTEYGKDINVKGWVRSHRSSKAVDFIALNDGSTINNIQIVVDPASMD 60

Query: 59  FEIAKSVRSEWVLCIDG-LVMSRSAETINANIITGQ-IELSAQKIEILSVA-EELPLPVF 115
            E  K++ +   + + G LV S+ A         GQ +E+ +++IEI  +   + P+   
Sbjct: 61  AETLKNITTGACISVVGQLVKSQGA---------GQTVEIQSREIEIYGLCPSDYPMQKK 111

Query: 116 GER-EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
           G+  EY      KY  L LR +T       R  +  ++        F    TP++TAS  
Sbjct: 112 GQSFEYMR----KYAHLRLRTNTFGAVFRIRHNMAIAVHKYFHDHGFYYFHTPLITASDA 167

Query: 175 EGARDFLVPSRVN------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPC 219
           EGA +    + ++            +  F+    +     QL   L A+     +   P 
Sbjct: 168 EGAGEMFQVTTLDLARTGKDGEVPYERDFFGKKTSLTVSGQLEGELGATALGAIYTFGPT 227

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           FR E+  + R   EF+ ++ E++F+++D++++  E+ ++
Sbjct: 228 FRAENSNTPRHLAEFWMIEPEVAFLDKDELMDLEEDFIK 266


>gi|322387310|ref|ZP_08060920.1| asparagine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321141839|gb|EFX37334.1| asparagine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 447

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F+  K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVFVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD+AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDEAI 294



 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++    ++G+  ++ E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMESLGM--DLTEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|296876373|ref|ZP_06900425.1| asparagine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296432663|gb|EFH18458.1| asparagine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 448

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 75  SQETSVFVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDEAI 295



 Score = 40.4 bits (93), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++    ++G+ +   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMESLGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 420 IERMVTFAAGTKHIREAIPFP 440


>gi|89072537|ref|ZP_01159109.1| lysyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89051641|gb|EAR57094.1| lysyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 501

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 129/270 (47%), Gaps = 25/270 (9%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           FL I+D  G  Q  A+ D     + K ++ ++     G ++        +    G + ++
Sbjct: 76  FLAIQDVSGRIQAYASKD-----VQKELKEKYSGLDIGDIIGIKGTLHKSG--KGDLYVN 128

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCR 155
             + E+L+ A   PLP        + +R++ R++DL    D+ H  +V R+++++++R  
Sbjct: 129 MDEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNDDSRHAFVV-RSKVVSAIRSF 186

Query: 156 MIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
           M+ + F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  GF+R 
Sbjct: 187 MVTKGFMEVETPMMHVI-PGGATARPFITHHNALDIDMY-LRVAPELYLKRLVVGGFERV 244

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV--- 270
           F+I   FR+E   S R   EF  ++  M++ + +D+++  E +L  +  +    + +   
Sbjct: 245 FEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSSIAIDVLGSSKMPYG 303

Query: 271 ------SNNFLRICYDDAIRRYGTDKPDLR 294
                 +  + R+   DAI++Y  +  +++
Sbjct: 304 EFEVEFAGPYTRMSMLDAIKQYNPEHEEIQ 333



 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|224613430|gb|ACN60294.1| Lysyl-tRNA synthetase [Salmo salar]
          Length = 569

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           + +SG VH  R  G  +IF D+R      QV+A   S   E       E+V   + L   
Sbjct: 106 LNVSGRVHAKRESGAKLIFYDLRGEGVKLQVMATNRSYKSE------GEFVRINNKL--- 156

Query: 80  RSAETINANIITGQI---ELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDL 133
           R  + I      G+    ELS   IE+  ++     LP   FG ++  +  RF+ R+LDL
Sbjct: 157 RRGDIIGVRGNPGKTKKGELSIIPIEMTLLSPCLHMLPHLHFGLKD--KETRFRQRYLDL 214

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  V R +II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 215 ILNDYVRQKFVTRAKIITYLRSFLDELGFLEIETPMMNLI-PGGAVAKPFVTYHNDLDMN 273

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 274 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 331

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
           +  E +L G+ +  + G  V 
Sbjct: 332 DITEKLLSGMVKHITGGYKVK 352



 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV  FP
Sbjct: 516 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLFFP 551


>gi|89100492|ref|ZP_01173353.1| lysyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084758|gb|EAR63898.1| lysyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 496

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/283 (22%), Positives = 122/283 (43%), Gaps = 29/283 (10%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R+H   DL           + +    V L+G +   R  G   F  I+D  G  Q+    
Sbjct: 36  RSHQSQDLIDEYGEQEKEAIEEQNISVTLAGRIMTKRGKGKAGFAHIQDLKGQIQIYVRQ 95

Query: 55  DS---ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EEL 110
           D+     +EI  S     ++ + G +              G++ +  +  E+L+ +   L
Sbjct: 96  DAIGEESYEIFNSADLGDLVGVTGTLFKTKV---------GELSIKVEAFELLTKSLRPL 146

Query: 111 PLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           P    G ++  +  R++ R+LDL       K  + R+RII SMR  + +  ++E  TP++
Sbjct: 147 PEKFHGLKDVEQ--RYRQRYLDLIMSQESKKTFITRSRIIQSMRRYLDSHGYLEVETPMM 204

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            + +    AR F+          Y +  A + + + L+  G ++ ++I   FR+E   + 
Sbjct: 205 HSIAGGASARPFITHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTR 263

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
             P EF  +++  ++ +  DI++  EN++  + EE     TV 
Sbjct: 264 HNP-EFTMIELYEAYADYRDIMSLTENLVAHIAEEVLGTTTVQ 305



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 28/37 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP+
Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPL 492


>gi|321258873|ref|XP_003194157.1| asparagine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317460628|gb|ADV22370.1| Asparagine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 600

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 124/312 (39%), Gaps = 36/312 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V   VRL GWVHR RP     F+ +RD  G  Q +   D      A  +  E  + + G 
Sbjct: 174 VDKRVRLQGWVHRFRPQKTNFFVVLRDGSGFLQCILTGDCIRTVDALDLSLECTVEVVGT 233

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----REYPE---SIRFKYR 129
           V     +        G +EL+    +I+  A     P   E    R  P+   SIR   R
Sbjct: 234 V----EKVKEGQTAPGGVELAVDYWKIIGKA-----PTGAEAIESRLQPDTDASIRADLR 284

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L+LR +     +  R   + ++R         E + P +  +S EG            G
Sbjct: 285 HLELRGEIAASVMRFRALFLRALRESFHKRRITEVTPPCMVQTSVEGGSTLF--EFDYYG 342

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           S   L Q+ Q Y + ++ S  D Y  I   FR E   + R   E+  L+ E++FV   D+
Sbjct: 343 SKAYLTQSSQLYLETVLPSLGDVYC-IQESFRAEKSLTRRHLSEYTHLEAELAFVNFKDL 401

Query: 250 LNTMENVLRGVFEEFSNGNTVSN--------------NFLRICYDDAIR---RYGTDKPD 292
           L+ +E+++  V +        S                F+R+ Y DAI+    +G  + D
Sbjct: 402 LDHIEDLICEVIDTLLADPIASEIIKNLNPEFVPPQRPFVRLDYCDAIKYLNEHGIMRED 461

Query: 293 LRNPIIMHNVTE 304
             + ++  ++ E
Sbjct: 462 GEDHVVGDDIAE 473


>gi|332160510|ref|YP_004297087.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325664740|gb|ADZ41384.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330863445|emb|CBX73564.1| lysyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 505

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 21/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+  + D     +      +W L   G ++  
Sbjct: 68  VTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYNEEFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 RGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  K R+++++ +R  M+ + F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 NTFKVRSQVMSGIRRFMVEKGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E + 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIALTEELF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286
           R + E     + V            F ++   +AI +Y
Sbjct: 299 RTLTETVLGSSVVQYGDQTFDFGKPFAKLTMKEAICKY 336



 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F++   +KE  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|312278089|gb|ADQ62746.1| Lysyl-tRNA synthetase [Streptococcus thermophilus ND03]
          Length = 496

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 19/251 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + ++     ++G +   R  G + F  I+D  G  Q+    D+     +EI K       
Sbjct: 56  LHEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLSDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  + A+ F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFDR-FVTRSKIISEIRRYLDAQGFLEVETPVLHNEAGGAAAKPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRVFRNEGMDATHNP-EFTSIEVYQAYADFH 282

Query: 248 DILNTMENVLR 258
           DI+N  E +++
Sbjct: 283 DIMNLTEGIIQ 293



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F +   +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFESQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|261378958|ref|ZP_05983531.1| lysine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269144660|gb|EEZ71078.1| lysine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 503

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 22/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  I+D  G  Q+  N      E+     + W L   G ++  
Sbjct: 68  VKIAGRMMLKRQMGKASFATIQDVTGQIQLYLNNKGVSQEVLDDF-NHWDL---GDIVGA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N   G++ +    I +LS +   PLP   +    +  +++ R++DL  +   +
Sbjct: 124 EGTLFKTN--HGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKYRQRYVDLIANEESR 180

Query: 141 NI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQA 197
           N  +KR++II S+R  M+ E+++E  TP++    P G  A+ F+          Y L  A
Sbjct: 181 NTFIKRSQIIQSVRNFMVNEHYLEVETPMM-HPIPGGATAKPFVTHHNALDIPLY-LRIA 238

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F + + ++   E+++
Sbjct: 239 PELYLKRLVVGGLERVFEINRSFRNEG-MSVRHNPEFTMIEFYEAFSDYERMMQMAEDII 297

Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           R      +    +S N         F R+    AI++Y
Sbjct: 298 RNASRAVNGTAKISYNGKEVDLESPFERLTILGAIKKY 335



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 462 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 498


>gi|149003235|ref|ZP_01828131.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147758695|gb|EDK65692.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 377

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294


>gi|78187216|ref|YP_375259.1| lysyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|123771051|sp|Q3B365|SYK_PELLD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78167118|gb|ABB24216.1| Lysyl-tRNA synthetase, class-2 [Chlorobium luteolum DSM 273]
          Length = 501

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 133/310 (42%), Gaps = 39/310 (12%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            D    V ++G +  +R  G   F  I+D  G  Q+    D    E+     + + L   
Sbjct: 51  EDAEEKVSVAGRIMAIRRMGKASFFHIQDSDGRMQIYLKKD----EVGDDAYATFKLLDI 106

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----------ES 123
           G ++  +  T      TG+I + A+  E+L  +   P+PV  E+E               
Sbjct: 107 GDIVGVNGYTFRTR--TGEISVHAESFELLCKSLR-PIPVAKEKEVEGEKVVFDAFADRE 163

Query: 124 IRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           +R++ R++DL  +  +    +KR+ I++ +R    ++ ++E  TPIL        AR F 
Sbjct: 164 LRYRQRYVDLIVNPEVRSTFIKRSAIVSHIRSFFTSQGWLEVETPILQPIYGGAAARPFT 223

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDME 240
                     Y L  A + Y + L+  GFD  F+ A  FR+E    DR    EF Q+++ 
Sbjct: 224 THHNALDMQLY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEG--IDRFHNPEFTQVELY 280

Query: 241 MSFVEQDDILNTMENVLR-------GVFEEFSNGNTVS--NNFLRICYDDAIRRY----- 286
           +++ + D ++  +E + +       G       G+ +S    F R+   D+IR Y     
Sbjct: 281 VAYKDYDWMMRLVEELFQQTAIAVNGTAMTTFLGHEISLEAPFRRLTIADSIREYTGAEI 340

Query: 287 -GTDKPDLRN 295
            G  + +LRN
Sbjct: 341 EGKTETELRN 350



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  GIDR+VML+ G +++R+V  FP
Sbjct: 460 RALEYGMPPTAGLGIGIDRLVMLITGEESIRDVIFFP 496


>gi|319946940|ref|ZP_08021174.1| asparagine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319746988|gb|EFV99247.1| asparagine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 454

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F+  K +
Sbjct: 21  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 80

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 81  SQETSVFVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 130

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 131 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 186

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 187 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 244

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD+AI
Sbjct: 245 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDEAI 301



 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++    ++G+ +   E  F    R +  G  PHGG   G
Sbjct: 370 LAPEGYGEIIGGSMREEDYDALVAKMESLGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 425

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 426 IERMVTFAAGTKHIREAIPFP 446


>gi|229158164|ref|ZP_04286232.1| Asparaginyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228625326|gb|EEK82085.1| Asparaginyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 463

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 127/327 (38%), Gaps = 61/327 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V   
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSSVKVE 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             ++ +  A+           E+ A KI+I  +++    P+  +R   E +R       L
Sbjct: 77  GKVIATPGAKQ--------PFEIKADKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T   +   R R I +       +   F+   TPI+T S  EGA +     RV     
Sbjct: 125 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 181

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             +P+                       Q      A  F   +   P FR E+  + R  
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270
            EF+ ++ E++F E  D++N  E++L+   +          EF N            N +
Sbjct: 242 AEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVI 301

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F RI Y +AI+       D + P+
Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328


>gi|119112485|ref|XP_317634.3| AGAP007858-PA [Anopheles gambiae str. PEST]
 gi|116123376|gb|EAA12164.3| AGAP007858-PA [Anopheles gambiae str. PEST]
          Length = 572

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 113/240 (47%), Gaps = 10/240 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G VH +R  G  +IF D+R      Q++A+  +A ++  +    E      G ++ 
Sbjct: 111 VSVAGRVHAIRESGDKLIFFDLRGEGQKLQIMAS--AAGYQNEEQFYDETSRLRRGDIIG 168

Query: 80  RSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
            +          G++ + A++I++L+     LP   +G ++  +  R++ R+LDL  +  
Sbjct: 169 VTGAP--GKTKKGELSVMAKQIQLLAPCLHMLPHLHYGLKD--KETRYRQRYLDLMLNND 224

Query: 139 HKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            ++I V R RII+ +R  +    F+E  TP++   +        V    +      L  A
Sbjct: 225 VRSIFVTRARIISFIRRFLDGAGFLEVETPMMNMIAGGATAKPFVTHHNDLNMDLFLRIA 284

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y ++L   G DR ++I   FR+E       P EF   +  M++ + +D++   E +L
Sbjct: 285 PELYLKMLTVGGLDRVYEIGRQFRNEGMDVTHNP-EFTTCEFYMAYADYNDLMEITEQLL 343



 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L    +++EV LFP
Sbjct: 521 ALEYGLPPTGGWGLGIDRLAMFLTDCTSIKEVLLFP 556


>gi|312863664|ref|ZP_07723902.1| lysine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322517081|ref|ZP_08069966.1| lysine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|311101200|gb|EFQ59405.1| lysine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322124341|gb|EFX95849.1| lysine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 496

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 19/251 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + ++     ++G +   R  G + F  I+D  G  Q+    D+     +EI K       
Sbjct: 56  LHEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLSDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  + A+ F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFDR-FVTRSKIISEIRRYLDAQGFLEVETPVLHNEAGGAAAKPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFH 282

Query: 248 DILNTMENVLR 258
           DI+N  E +++
Sbjct: 283 DIMNLTEGIIQ 293



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|123443572|ref|YP_001007545.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166230601|sp|A1JPL4|SYK_YERE8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|122090533|emb|CAL13402.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 505

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 21/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+  + D     +      +W L   G ++  
Sbjct: 68  VTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYNEEFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 RGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  K R+++++ +R  M+ + F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 NTFKVRSQVMSGIRRFMVEKGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E + 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIALTEELF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286
           R + E     + V            F ++   +AI +Y
Sbjct: 299 RTLTETVLGSSVVQYGDQTFDFGKPFAKLTMKEAICKY 336



 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F++   +KE  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|153951744|ref|YP_001398557.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|166229803|sp|A7H4X7|SYK_CAMJD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|152939190|gb|ABS43931.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 501

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 127/285 (44%), Gaps = 25/285 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI----AKSVRSEWVLCIDGLVM 78
           ++G +  +R  G  IF +I D     Q+  + DS   E+     K++ +  ++ + G   
Sbjct: 60  VAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKNLEAGDIVLVKGFPF 119

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT- 137
                       TG+  L A ++++ + A  +PLP           R++ R++D+  +  
Sbjct: 120 VTK---------TGEFSLHASEVKLATKAI-VPLPEKYHGLTDIEQRYRKRYVDMIMNAE 169

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           + K+ + R+++++ +R     + F+E  TP++   +        V    + G    L  A
Sbjct: 170 VRKDFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIA 229

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+  F+I  CFR+E       P EF  ++   ++    D+++  E + 
Sbjct: 230 PELYLKRLVVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTEELF 288

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293
             + ++ + G T+         S  F RI Y DA+ +YG    DL
Sbjct: 289 ALLLDKLNLGKTIEFDGKMIDFSKPFERITYKDALCKYGGLDRDL 333



 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL   K++R+V LFP
Sbjct: 453 ALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFP 488


>gi|332638688|ref|ZP_08417551.1| lysyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 494

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 34/278 (12%)

Query: 2   HRY-RTHSCG-------DLGVSDVGS---FVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH+         D    D+ +    V ++G +   R  G I F DI+D  G  QV
Sbjct: 32  HRFERTHTAAQLHELYDDTTAEDLEAQAIEVTIAGRMMTKRRSGKISFADIKDRSGRIQV 91

Query: 51  -VANP--DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
            V  P      +E+ K      +L   G VM   A         G++ ++   +  L+ A
Sbjct: 92  FVQKPVVGEEAYELLKKSDLGDILGFTGTVMKTRA---------GELSINVTALTHLTKA 142

Query: 108 EELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
              PLP           +++ R+LDL    D+  +  VKR++II ++R  +  E FIE  
Sbjct: 143 LR-PLPDKFHGLTDVETKYRQRYLDLISNEDSFER-FVKRSKIITAIRHYLDGEGFIEVE 200

Query: 166 TPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE- 223
           TP+L   +    AR F+          Y +  A + + + L+  G +R ++I   FR+E 
Sbjct: 201 TPMLQNEAGGASARPFITHHNALDIDLY-MRIALELHLKRLIVGGMERVYEIGRVFRNEG 259

Query: 224 -DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            DP+ +    EF  ++   ++   +D++   EN+++  
Sbjct: 260 MDPKHN---PEFTVIETYAAYWNFEDVMVETENIIKAA 294



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL     +R+V LFP
Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTDTDTIRDVLLFP 491


>gi|328866150|gb|EGG14536.1| lysine-tRNA ligase [Dictyostelium fasciculatum]
          Length = 513

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 118/257 (45%), Gaps = 14/257 (5%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           + V ++G V   R  G  +F    D+ G++ Q++ N       + +  +   +L    ++
Sbjct: 67  TVVTIAGRVKNKRAAGNALFFYDVDNNGVSLQLLVNKKEYT-SVEEFTKINSILRRGDII 125

Query: 78  MSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLR-R 135
            ++     +    TG++ L   ++ +LS     LP     ++E     RF+ R+LD+   
Sbjct: 126 GAKGKPGRSK---TGELSLFVSEMFLLSPCLHMLPRVALTDQE----TRFRQRYLDMIIN 178

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
           D + +N V R+++I  +R  +    F+E  TP+L   +    A+ F           + +
Sbjct: 179 DNVKRNFVIRSKVIQGVRRYLDNLGFVEVETPMLNMIAGGAAAKPFKTHHNALSKDMF-M 237

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  G DR ++I   FR+ED      P EF   +  M++V+ +D++   E
Sbjct: 238 RIAPELYLKQLVVGGMDRVYEIGKQFRNEDIDHTHNP-EFTTCEFYMAYVDYNDLMTMTE 296

Query: 255 NVLRGVFEEFSNGNTVS 271
           ++L G+  +    N + 
Sbjct: 297 DMLSGIVRDIHGTNKLK 313



 Score = 45.1 bits (105), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + Q G+PP GG   G+DR VMLL    N++EV LFP
Sbjct: 475 SLQYGLPPTGGWGLGVDRFVMLLSDTYNIKEVILFP 510


>gi|190348974|gb|EDK41535.2| hypothetical protein PGUG_05633 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 481

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 124/288 (43%), Gaps = 37/288 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSAC-FEIAKSVR--SEWVL 71
           V S V+  G V  VR    + F+D+ D   +    VV N D+   F++ +SV    +WV 
Sbjct: 39  VDSLVKTQGHVKAVRSFKNLHFVDLSDGSTHSTLNVVLNGDTNINFKVGQSVSFVGKWV- 97

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
                    S  + +  ++    E   +   I  V E  P+     ++   S +F     
Sbjct: 98  --------ESKGSQDYELLYDSTENEHKAAVIGEVPESYPI-----QKKSSSYQFLRTLP 144

Query: 132 DLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGA-RDFLVPSRVN- 187
            LR  T     V R R  +     R   +N  I+ S P++T+S  EGA   F+V ++ + 
Sbjct: 145 TLRHRTSSLASVLRLRSFLEGSFQRFFEQNDVIKVSAPLITSSDCEGAGEQFIVEAKDSK 204

Query: 188 -QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            +  F+  P       QL   +++   +R + + PCFR E+  ++R   EF+ L+ E+S+
Sbjct: 205 PENPFFGKPAYLTVSTQLHLEVLSQSLNRVWALTPCFRAEESHTNRHLSEFWMLEAELSY 264

Query: 244 VEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           +E    I +  EN++R V ++             I  D A  RY  D+
Sbjct: 265 IESVHQICDFTENMIRYVTQDVVQS---------IANDLAQSRYNKDE 303



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 13/116 (11%)

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGI 513
           A  PF MP    ES   N  ++     +DL+  G  E+  G +R H  E +LQ   N  +
Sbjct: 376 AQKPFYMP----ESENQNSTVAC----FDLIIPGIGELVGGSVREHNYEKLLQELKNRNM 427

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           S E  +N +    R  + G  PHGG   G++R+V  L G  ++++V  FP +   C
Sbjct: 428 SIE--DNEWYLSIR--ENGTVPHGGFGMGMERLVAFLSGMASIKDVIAFPRTPGSC 479


>gi|318607021|emb|CBY28519.1| lysyl-tRNA synthetase (class II) [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 505

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 21/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+  + D     +      +W L   G ++  
Sbjct: 68  VTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYNEEFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 RGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  K R+++++ +R  M+ + F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 NTFKVRSQVMSGIRRFMVEKGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E + 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIALTEELF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286
           R + E     + V            F ++   +AI +Y
Sbjct: 299 RTLTETVLGSSVVQYGDQTFDFDKPFAKLTMKEAICKY 336



 Score = 45.4 bits (106), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F++   +KE  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|332717134|ref|YP_004444600.1| lysyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325063819|gb|ADY67509.1| lysyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 499

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 134/282 (47%), Gaps = 23/282 (8%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           ++ G  V ++G V+  R  G  +F+DI D  G  Q+ ++ D+      ++ R+   +   
Sbjct: 58  TETGDTVTVAGRVYSSRNSG--MFMDIHDASGKVQIFSHKDTT----PETARNLLPMIDI 111

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++  + +        G++ ++A++I +L+ +  LP+P          +R++ R LD+ 
Sbjct: 112 GDIIGVTGKVRRTK--RGELTINAEEITMLTKSL-LPMPEKWHGVSDIELRYRKRHLDIL 168

Query: 135 RDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
            +   K   ++R++I++ +R  M AE F+E  TP+L T      A  F       +   Y
Sbjct: 169 ANEDSKLRFLQRSKILSGIRRFMEAEGFLEVETPMLQTVYGGATADPFKTFHNTLKMDMY 228

Query: 193 ALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
            L  AP+ + +  + SG  D+ F+I   FR+E   +   P EF  ++   ++ + +DI+ 
Sbjct: 229 -LRIAPELFLKRTLVSGLSDKVFEINRNFRNEGVSTRHNP-EFTMMECYWAYADYEDIMG 286

Query: 252 TMENV-------LRGVFEEFSNGNTVS--NNFLRICYDDAIR 284
            +E +       L G  E    G T+S    F R+   DA++
Sbjct: 287 LVERLFETLAIALHGTTEVEFQGQTISFKGPFKRVPMPDAVK 328



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 12/98 (12%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++  CN +E+ +           R  M E + QA +  G   + +++ F     A   G
Sbjct: 406 RFESYCNAWEVGNAFSELNDPEEQRRRMVEQLEQAHAR-GEKDKQLDDEF---LDAIDQG 461

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR++MLL  A ++R+V LFP  +N  D
Sbjct: 462 MPPAGGLGIGVDRLIMLLTNAPSIRDVILFPARRNKAD 499


>gi|237752509|ref|ZP_04582989.1| lysyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375998|gb|EEO26089.1| lysyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 500

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 130/286 (45%), Gaps = 25/286 (8%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLC 72
            D     +++G +  +R  G   F+ I D+ G+ QV    N     FE+ K       + 
Sbjct: 53  KDTSKSAQVAGRIKFIRLMGKAAFIKIEDYSGVLQVYLSKNELDENFEVFKKY-----IE 107

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           +  +V+++    +     TG++ L A + +IL+ A   PLP          +R++ R+LD
Sbjct: 108 VGDIVVAKGFPFVTK---TGELSLHALEFKILTKAIS-PLPEKFHGLVDIELRYRQRYLD 163

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQG 189
           L  ++ +  + + R+RI++ +R    ++ F+E  TP++    P GA  + F+        
Sbjct: 164 LIMNSKVRDSFILRSRIVSCVRKFFESKEFLEVETPMMH-PIPGGANAKPFVTYHNALNV 222

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++ +  D+
Sbjct: 223 ERY-LRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYKDYKDL 280

Query: 250 LNTMENVLRGVFE--------EFSNGNTVSNNFLRICYDDAIRRYG 287
           +   + +   + E        EF+  +   + F  I Y+DA+   G
Sbjct: 281 IALTKELFYFLLEMLKLPKQLEFNGKSIDFSTFREISYEDALVEIG 326



 Score = 44.3 bits (103), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YR 527
           ND     A +++L   G EIA+G    +     L+ F     +KE  +     +      
Sbjct: 392 NDTNPYIADRFELFIGGSEIANGFSELNDPLDQLERFKAQVAAKEAGDEEAQYMDEDYIT 451

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL G  ++++V LFP
Sbjct: 452 ALSYGMPPTAGEGIGIDRLVMLLTGNISIKDVILFP 487


>gi|38234687|ref|NP_940454.1| lysyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|38200951|emb|CAE50668.1| Putative integral membrane protein/lysyl-tRNA synthetase fusion
           [Corynebacterium diphtheriae]
          Length = 1049

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 115/242 (47%), Gaps = 22/242 (9%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDS-ACFEIAKSVRSEWVLCIDGLVM 78
           L+G +  +R HG ++F D+ +    TQ++     PD+ A F+   S R + +     +  
Sbjct: 620 LTGRIWFIRNHGQVLFADVVEGERRTQLLIDATTPDALASFKRLVS-RGDIISATGVMGQ 678

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           SR+      +++     ++A+ +        +P+P    R  P + R K+R +D   ++ 
Sbjct: 679 SRNG---TPSLLVQSWTMAAKSL--------VPMPRQASRN-PHT-RAKFRHIDFTMNSQ 725

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
            ++I   R+R I ++R  ++++ ++E  TPIL T      AR F    R        L  
Sbjct: 726 ARSIFSARSRAITAVRSVLVSQGYLEAETPILQTIHGGANARPFRTHIRAYDQPL-TLRI 784

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R F++   FR+E   +   P EF  L+   ++   D +    EN+
Sbjct: 785 APELYLKRLVVGGFERVFEMGRNFRNEGVDATHNP-EFTSLEAYQAYGNWDTMRELTENI 843

Query: 257 LR 258
           +R
Sbjct: 844 IR 845



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 13/93 (13%)

Query: 479  AFQYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           R  +++  L+A      + E+ EN      +A +
Sbjct: 954  AQRWDLVACGMELGTAYTELADPIEQRARLTDQSLRAAGGDAEAMELDEN----FLQALE 1009

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             GMPP GG+  GIDR+VM L G +N+REV  FP
Sbjct: 1010 FGMPPTGGLGIGIDRLVMFLTG-QNIREVLAFP 1041


>gi|330686072|gb|EGG97694.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 495

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/272 (21%), Positives = 126/272 (46%), Gaps = 21/272 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  ++D  G  Q+    D      F++ K      ++ ++G++
Sbjct: 61  VAIAGRIMTKRGKGKAGFAHVQDLSGQIQIYVRKDQIGEEQFDLWKHADLGDIVGVEGVM 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--R 134
              +         TG++ + A+   +L+ A   LP    G ++  +  R++ R+LDL   
Sbjct: 121 FKTN---------TGELSVKAKSFTLLTKALRPLPDKFHGLQDIEQ--RYRQRYLDLITN 169

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193
           +D+  +  + R++II  MR  +  + F+E  TP++   +    AR F+        + Y 
Sbjct: 170 QDST-RTFINRSKIIQEMRNYLNQKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLY- 227

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++  
Sbjct: 228 MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYHDIMDLT 286

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           E+++R + +E      V  N   I  + + +R
Sbjct: 287 ESMVRHIAQEVLGSAKVQYNGTEIDLESSWKR 318



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490


>gi|315037519|ref|YP_004031087.1| lysyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312275652|gb|ADQ58292.1| lysyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|327182815|gb|AEA31262.1| lysyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 516

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 23/259 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      ++I K       L IDG V
Sbjct: 61  TKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIDGEV 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--R 134
           M            TG++ + A  +  LS A   LP    G ++  E+I ++ R+LDL   
Sbjct: 121 MKTD---------TGELTIRALHVTFLSKALRPLPDKYHGLKDV-EAI-YRQRYLDLITN 169

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
           RD+  +  V RT+II ++R  +  +NF+E  TP+L  + P G  AR F+        + Y
Sbjct: 170 RDSYMR-FVHRTQIIQAIRDYLNGQNFLEVETPVL-HNIPGGAEARPFITHHNALDINLY 227

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                    K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++ 
Sbjct: 228 MRIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDYHDVMDE 285

Query: 253 MENVLRGVFEEFSNGNTVS 271
            E ++R   +  S+   ++
Sbjct: 286 AEGIIRAAAKVVSDDGKIT 304



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 454 RAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 490


>gi|118795020|ref|XP_321875.3| AGAP001276-PA [Anopheles gambiae str. PEST]
 gi|116116576|gb|EAA01739.3| AGAP001276-PA [Anopheles gambiae str. PEST]
          Length = 474

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/329 (20%), Positives = 136/329 (41%), Gaps = 67/329 (20%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDG 75
           G+ V + GWV  +R   G +F+DI D  G    Q+V N +       K++ + +   +D 
Sbjct: 33  GNKVNVKGWVKSIRNMKGNLFVDINDGSGPQNFQLVINKE-------KAIDTAYGCSVDA 85

Query: 76  L-VMSRSAETINANIITGQIELSAQKIEILSVAEELPL----PVFGEREYPESIRFKYRF 130
             V+  S +         Q+EL    ++ L+   + PL    P + ++ YP      +  
Sbjct: 86  CGVLVASPKN--------QLEL---HVDTLTEVGKCPLTEGYPFYPKKSYPPEYIRNHLH 134

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +++      R     +    +    F++  TP+LT++  EGA +  +   +N+  
Sbjct: 135 LRSRVNSMASTFRVRHEATRAFNEYLQRGGFVQIHTPVLTSNDCEGAGEAFLVKPLNEQL 194

Query: 191 FYALPQ--APQQYKQL---------------LMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              + +   P ++                   MA G D+ +   P FR E+ +S+    E
Sbjct: 195 LKGMAKENVPLEHAYFDRATFLTVSGQLHLEAMAHGLDKVYTFGPTFRAENCKSNIHLSE 254

Query: 234 FYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF-------------SNGNT---------- 269
           FY L++E +F+   D++ + +E++L+ V +               SN             
Sbjct: 255 FYMLELEEAFMGTLDELTHRVEDMLKSVTKSVIDRSAADLSVVRKSNSQDGGGQLEDCFR 314

Query: 270 -VSNNFLRICYDDAIRRYGTDKPDLRNPI 297
            +   F R+ YD+A+     ++  L++P+
Sbjct: 315 WIDKPFPRLTYDEAMHILQANEAKLKSPV 343


>gi|115398990|ref|XP_001215084.1| lysyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114191967|gb|EAU33667.1| lysyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 609

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 123/253 (48%), Gaps = 11/253 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           V+++G +   R  G  +IF DIR      QVV    ++  E+    + E +   D + ++
Sbjct: 124 VQIAGRIFTKRASGAKLIFYDIRAEGAKVQVVCQAQNSKSEVPFEAQHEHLRRGDVIGIV 183

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A +I +L+     +P   FG ++  +  R++ R+LDL  + 
Sbjct: 184 GYPGRTSPKNRADGELSIFATEIVLLAPCLHAIPSEHFGLQDKEQ--RYRQRYLDLIMND 241

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194
             +N+ + R++I+  +R      +F+E  TP++ A +    A+ F+   + ++   F  +
Sbjct: 242 RSRNVFITRSKIVRYIRNFFDNRDFVEVETPMMNAIAGGATAKPFVTHHNELDMNLFMRV 301

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  E
Sbjct: 302 --APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNLTE 358

Query: 255 NVLRGVFEEFSNG 267
            ++ G+ +  + G
Sbjct: 359 ELVSGLVKHVTGG 371



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 537 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 572


>gi|320162942|gb|EFW39841.1| asparaginyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 864

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/317 (22%), Positives = 122/317 (38%), Gaps = 67/317 (21%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCI 73
           + G  V +SGWV  VR    + F ++ D   +   Q+V  P        K + +   + +
Sbjct: 418 NAGDHVVVSGWVRSVRAQKSVSFAELSDGSTLKSIQIVLKPGQE-----KDIATGACIKV 472

Query: 74  DGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            G +++   +        GQ +E+ A +I +L  +++   P+  +R   E +R       
Sbjct: 473 TGKLVASPGQ--------GQALEIDASEIVVLGTSDQTDYPLQKKRHTNEFLR---DIAH 521

Query: 133 LRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFL--------- 181
           LR  T     + R R  +  ++      ++F+  +TPI+T+S  EGA             
Sbjct: 522 LRARTNSGGAILRVRNALTMAIHRHFQDKDFLNVNTPIITSSDCEGAGSLFRLETSPAAA 581

Query: 182 --------VPSRVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRL 230
                           SF+  P       QL    +ASG  R + + P FR E+  + R 
Sbjct: 582 VGADAAAASQPPAPHESFFGHPAYLTCSGQLHAEAVASGMSRVYVLGPTFRAENSHTKRH 641

Query: 231 PGEFYQLDMEMSFVEQ------------------------DDILNTMENVLRGVFEEFSN 266
             EFY L+ E  F++Q                        DD+ +   +V   + E    
Sbjct: 642 MAEFYMLEAEQFFIDQMDELLDLTSDCVKDLTATIVSKCSDDLAHFQRHVDSNLLERLH- 700

Query: 267 GNTVSNNFLRICYDDAI 283
            NT+   F R+ Y +A+
Sbjct: 701 -NTIEQPFARLTYTEAV 716



 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  E+  G +R   + V++Q   +  +  ++    +  L R    G  PHGG   
Sbjct: 780 DLLVPGIGELVGGSLREERASVLMQIMRSHQMLPQM--QWYLDLRR---YGTAPHGGFGM 834

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G +R++M L G +NVR+   FP +   C
Sbjct: 835 GFERLMMYLTGTENVRDTIPFPRTAGQC 862


>gi|319787301|ref|YP_004146776.1| lysyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465813|gb|ADV27545.1| lysyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 509

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 119/276 (43%), Gaps = 20/276 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG-LV 77
           V ++G +   R  G   F  + D  G  Q+    N     +E  KS     ++ ++G L 
Sbjct: 72  VAIAGRLMAKRVMGKASFAQVMDESGRIQLFLQGNVLGEAYEAFKSFDIGDIVAVEGGLT 131

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +R          TG++ L A  + +L V    PLP           R++ R++DL    
Sbjct: 132 RTR----------TGELSLKATSLRLL-VKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTP 180

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYAL 194
             + + VKR++II ++R  +    F+E  TP++    P G  AR F+          Y L
Sbjct: 181 EAREVFVKRSKIIRAIRSWLDERRFLEVETPMMH-YIPGGATARPFVTHHNALDLQLY-L 238

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  G +R ++I   FR+E   +   P EF  L++  ++    ++++  E
Sbjct: 239 RVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRHNP-EFTMLELYEAYATYHEVMDLTE 297

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           NV+R           V     RI    A RR+  D+
Sbjct: 298 NVIRDTARSVLGTTEVEWEGQRIDLGPAFRRWRMDE 333



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L  NG E+A+G    +  E     F     +KE  ++    +   Y RA + GM P 
Sbjct: 415 RFELFINGKELANGFSELNDPEDQAARFQAQVAAKEGGDDEAMHYDADYIRALEYGMAPT 474

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 475 GGLGIGIDRLVMLLTGSTSIRDVLLFP 501


>gi|254478049|ref|ZP_05091433.1| tRNA synthetase class II (D, K and N) subfamily protein
           [Carboxydibrachium pacificum DSM 12653]
 gi|214036053|gb|EEB76743.1| tRNA synthetase class II (D, K and N) subfamily protein
           [Carboxydibrachium pacificum DSM 12653]
          Length = 507

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 15/150 (10%)

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
           ++FCWI ++PF   NE E      H+              ND   I     DLV NG EI
Sbjct: 371 YKFCWIKNYPFI--NELEYDSQSLHDAIGQNIFTKRIRNSNDTEGI-----DLVLNGIEI 423

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
           ASGG + + +E  +++   + I  +  +  +    +  + G PP   I  G +R ++ L 
Sbjct: 424 ASGGQKVNTAEEFIESLELLKIKDK--QKNYDYFIKVLKTGAPPLFSIGIGWERTLLALF 481

Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
             K + +V +FP  Q       G+P  +S+
Sbjct: 482 ETKTISDVMVFPKDQ------FGNPEIISI 505



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 11/171 (6%)

Query: 133 LRRDTLHKNIVKRTRIINSM----RCRMIAENFIECSTPILTASSPE-GARDFLVPSRVN 187
           L R+ L +  V+  R INS+    R  +  E FIE   PIL     E G +++ + + + 
Sbjct: 88  LLRNYLDRYNVEFFRKINSLEDSVRDFLKKEKFIELRNPILWVPVQEYGTKEWRIQNPIT 147

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR----DEDPRSDRLPGEFYQLDMEMSF 243
           + + Y L Q+P     +   +G +R FQ  PCFR    +   R+D L  EF QL +  +F
Sbjct: 148 KETPYILLQSPNILNLISTVAGIERNFQFHPCFRLAEENSLARNDSLI-EFTQLAITAAF 206

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
           +  ++ +  +E++   + ++  +   +   F  + Y ++++ Y TD PDLR
Sbjct: 207 LTNEEAMRLIEDMFFYIIKKHFDIE-IEKPFEILDYHESMKLYSTDHPDLR 256


>gi|15903440|ref|NP_358990.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116515635|ref|YP_816831.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|38258368|sp|Q8CWQ4|SYN_STRR6 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|122278323|sp|Q04JK7|SYN_STRP2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|15459048|gb|AAL00201.1| Asparaginyl-tRNA synthetase (asparagine--tRNA ligase)
           [Streptococcus pneumoniae R6]
 gi|116076211|gb|ABJ53931.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 447

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 112/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II           F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYVTYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|238759278|ref|ZP_04620444.1| Lysyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238702439|gb|EEP94990.1| Lysyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 505

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 125/278 (44%), Gaps = 21/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+  + D     +      +W L   G ++  
Sbjct: 68  VTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 RGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDDSR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  K R+++++ +R  M+ + F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 HTFKIRSQVMSGIRSFMVEKGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E + 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286
           R + E     + V            F ++   +AI +Y
Sbjct: 299 RTLTETILGSSVVQYGEQTFDFGKPFAKLTMKEAICKY 336



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F++   +KE  ++    F   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFFDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|118418931|gb|ABK87350.1| asparagine--tRNA ligase [Bacillus thuringiensis str. Al Hakam]
          Length = 475

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 128/327 (39%), Gaps = 61/327 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V   
Sbjct: 29  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 88

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             ++ +  A+           E+ A+KI+I  +++    P+  +R   E +R       L
Sbjct: 89  GKVIATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 136

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T   +   R R I +       +   F+   TPI+T S  EGA +     RV     
Sbjct: 137 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 193

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             +P+                       Q      A  F   +   P FR E+  + R  
Sbjct: 194 NNVPKDEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 253

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270
            EF+ ++ E++F E  D++N  E++L+   +          EF N            N +
Sbjct: 254 AEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVI 313

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F RI Y +AI+       D + P+
Sbjct: 314 NSDFGRITYTEAIKVLQESGADFKYPV 340


>gi|319760399|ref|YP_004124337.1| lysyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039113|gb|ADV33663.1| lysyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 515

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 19/273 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y+TH   DL   ++   V +SG +   R  G   F+ ++D  G  Q+    +S    ++K
Sbjct: 59  YKTHE--DLVALNIQ--VNISGRIMTRRIMGKASFIVLKDGEGSIQLYITINSL---LSK 111

Query: 64  SVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYP 121
            +    +  +D G ++   A+ I     TG++ +    + +LS +   LP   +G     
Sbjct: 112 QIYVNHLKQLDLGDIIG--AQGILFKTRTGELSIRCYNVMLLSKSLRPLPSKFYGLNNSE 169

Query: 122 ESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--R 178
           +  +++ R+LDL   D   K   KR+ II  +R  M   +FIE  TPI+  + P GA  R
Sbjct: 170 K--KYRQRYLDLIVNDKSSKIFKKRSLIIYKIRQFMKKYDFIEVETPIM-HTIPGGAIAR 226

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F V      G    L  AP+ Y + L+  GF+R F+I   FR+E       P EF  ++
Sbjct: 227 PF-VTYHNKLGMHMYLRIAPELYLKKLIIGGFERIFEINRNFRNESISPYHNP-EFTMME 284

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           + +++ +  D+++  + +L  + E+    NT+ 
Sbjct: 285 VYIAYSDYKDMISFTQKLLSKLAEQIFKSNTIQ 317



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  GI  GIDR+VMLL    N+R+V LFP
Sbjct: 475 ALEYGLPPTSGIGIGIDRLVMLLTNQHNIRDVILFP 510


>gi|261403949|ref|YP_003240190.1| lysyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261280412|gb|ACX62383.1| lysyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 503

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 119/257 (46%), Gaps = 19/257 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77
           V L+G +   R  G   F  I+D  G  Q+    DS   A +E    +    ++ + G++
Sbjct: 68  VNLAGRIMAKRGMGKASFAHIQDLSGRIQIYVRQDSVAEAQYEAFSILDLGDIIGVKGVL 127

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
                        TG+  +  +++E+LS +   LP    G ++    +R++ R++DL  +
Sbjct: 128 FKTK---------TGETTVKVKELEVLSKSLYPLPEKFHGLKDV--ELRYRQRYVDLIIN 176

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
             + K  + R+RII SMR  + ++ ++E  TP L + +    AR F+          Y +
Sbjct: 177 PDVQKTFITRSRIIQSMRRYLDSQGYLEVETPTLHSIAGGAAARPFITHHNALDMELY-M 235

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G ++ ++I   +R+E   +   P EF  +++  ++ +  DI+   E
Sbjct: 236 RIAIELHLKRLIVGGLEKVYEIGRVYRNEGISTRHNP-EFTMIELYEAYADYKDIMALTE 294

Query: 255 NVLRGVFEEFSNGNTVS 271
           N++  + +E      +S
Sbjct: 295 NLIAHIAQEVLGTQVIS 311



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 30/41 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           RA + GMPP GG+  GIDR++MLL  + ++R+V LFP  +N
Sbjct: 461 RALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLFPHMRN 501


>gi|308463696|ref|XP_003094120.1| CRE-NARS-1 protein [Caenorhabditis remanei]
 gi|308248532|gb|EFO92484.1| CRE-NARS-1 protein [Caenorhabditis remanei]
          Length = 545

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 118/279 (42%), Gaps = 24/279 (8%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-AKSVRSEWVLCIDGLVM 78
           V +  WVHR+R  G  ++FL +RD YG  Q V N D  C    A ++ +E  + + G++ 
Sbjct: 124 VTIKAWVHRIRRQGKSLMFLVLRDGYGFIQCVLN-DKLCQSYDAVTLSTESSIQVYGVI- 181

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
              A     +   G  EL+    E++  A    +     ++    +    R L +R +  
Sbjct: 182 --KALPDGKDAPDGH-ELTVDYWELIGAAPAGGIDNVLNKDAGVDVMLDNRHLVIRGENA 238

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
            + +  R     +MR    A  + E + P L  +  EG           + ++  L Q+ 
Sbjct: 239 SRILRIRAAATRAMRDHFFAAGYTEVTPPTLVQTQVEGGSTLFGLDYYGEPAY--LTQSS 296

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN--- 255
           Q Y +   A+  D Y  IA  +R E  R+ R   E+  ++ E +F+  D +++ +E+   
Sbjct: 297 QLYLETCNAALGDVYC-IAQSYRAEKSRTRRHLSEYQHVEAECAFITFDQLMDRIESLVC 355

Query: 256 ----------VLRGVFEEFSNG-NTVSNNFLRICYDDAI 283
                     V +G+ E  + G    S  F R+ Y +AI
Sbjct: 356 DTVDRLLADPVTKGLIEFVNPGYKPPSRPFKRMAYKEAI 394



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G +R      ML AF   GI  +   N F  + +  + G  PHGG   
Sbjct: 460 DLLMPGVGEIVGGSMRIWQESEMLAAFERAGIDPK---NYFWYMDQR-KYGSVPHGGYGL 515

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R +  L    ++R+V L+P
Sbjct: 516 GLERFICWLTDTHHIRDVCLYP 537


>gi|309806964|ref|ZP_07700946.1| lysine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308166584|gb|EFO68781.1| lysine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 503

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 23/273 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            R++G +   R  G + F DI D  G  Q+    D      ++I K       L IDG V
Sbjct: 60  TRVAGRMLAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYQIFKQADLGDFLGIDGHV 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--R 134
           M            TG++ + A  I  LS A   PLP  +   +  E I ++ R+LDL   
Sbjct: 120 MKTD---------TGELTIRASHITFLSKALR-PLPDKYHGLQNVEQI-YRQRYLDLISN 168

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
           +D+ +K  + RT+II ++R  + + +F+E  TP+L  + P G  AR F+        + Y
Sbjct: 169 QDS-YKRFLNRTKIIQAIRDYLNSLDFLEVETPVL-HNIPGGAEARPFITHHNALDINLY 226

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                    K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++ 
Sbjct: 227 MRIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELETYCAYWDFHDVMDE 284

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            E ++R   +  S    ++     I    + RR
Sbjct: 285 AEGIIRAAAKVVSEDGKINYQGTDIDLGKSFRR 317



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM--SQNFCDL 571
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP    ++F DL
Sbjct: 453 RAMEFGMPPTGGLGIGIDRLVMLLTNAPAIRDVLLFPTMRPEHFDDL 499


>gi|238752990|ref|ZP_04614449.1| Lysyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238708778|gb|EEQ01037.1| Lysyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 505

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 123/278 (44%), Gaps = 21/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+  + D     +      +W L   G ++  
Sbjct: 68  VTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYNEEFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL   D   
Sbjct: 125 RGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           K    R+++++ +R  M+ + F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 KTFKIRSQVMSGIRSFMVEKGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E + 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286
           R + E     + V            F ++   +AI +Y
Sbjct: 299 RTLTETVLGSSVVQYGEQTFDFGKPFAKLTMKEAICKY 336



 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F++   +KE  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|198465182|ref|XP_002134927.1| GA23748 [Drosophila pseudoobscura pseudoobscura]
 gi|198150046|gb|EDY73554.1| GA23748 [Drosophila pseudoobscura pseudoobscura]
          Length = 707

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 10/239 (4%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRS-EWVLCIDG 75
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V   D  C      V S E  + + G
Sbjct: 126 GVRVKIFGWVHRLRRQGKALMFLTLRDGTGFLQCVLT-DLLCQTYQALVLSTESSVVLYG 184

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           ++ +      +  I  G  EL     E++ +A           E    ++   R + +R 
Sbjct: 185 ILKA----VPSGKIAPGGHELHVDYWELIGLAPPGGADAILNEEALPDVQLDNRHIMIRG 240

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +   K +  R+ ++ + R       + E + P L  +  EG           + +F  L 
Sbjct: 241 ENTSKVLKMRSVVMQAFRDHYFDRGYNEVTPPTLVQTQVEGGSTLFKMQFFGEEAF--LT 298

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  DD+L+ +E
Sbjct: 299 QSSQLYLETCLPALGD-VFTIAQSYRAEQSRTRRHLAEYTHVEAECPFISYDDLLDRLE 356


>gi|161579024|ref|NP_870953.2| asparaginyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 462

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 106/264 (40%), Gaps = 30/264 (11%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRD--HYGITQVVANPDSACF--EIAKSVRSEWVLCIDG 75
           V + GW+   R   GG  FL++ D    G  QVVA  +   +  EI K           G
Sbjct: 19  VEIRGWIRTRRDSKGGFSFLEVNDGTSLGNLQVVAPAELENYAEEIQK--------LTAG 70

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +    E + +       EL A  + ++   +    P+  +R   E +R ++  L  R 
Sbjct: 71  CSVVVQGELVESPAKGQSTELHASSVRVIGWCDGETYPLQKKRHSFEKLR-EWSHLRART 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           +TL   +  R RI  S+      E F    TPI+TAS  EGA +    + +N        
Sbjct: 130 NTLGAVMRVRNRISQSIHRFFDDEGFNYLHTPIITASDCEGAGEMFRVTTLNLEKLAGSN 189

Query: 188 -----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                +  F+  P       QL     A+   R +   P FR E+  + R   EF+ ++ 
Sbjct: 190 RPFDTKQDFFQKPTHLTVSGQLEAETYATALSRVYTFGPTFRAENSNTSRHLAEFWMVEP 249

Query: 240 EMSFVEQDDILNTMENVLRGVFEE 263
           E +F + +D +   E  L+ VF +
Sbjct: 250 EAAFYDLNDNMQLAERFLKRVFSD 273


>gi|257868308|ref|ZP_05647961.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257874419|ref|ZP_05654072.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257877913|ref|ZP_05657566.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257802422|gb|EEV31294.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257808583|gb|EEV37405.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257812079|gb|EEV40899.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 497

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 133/305 (43%), Gaps = 38/305 (12%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L           ++++     ++G +   R  G   F  ++D  G  Q+    
Sbjct: 39  RTHNSAELHELFDQRTKEELAEMNLSASIAGRIVTKRGKGKAGFAHLQDREGRIQIYVRK 98

Query: 55  DSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
           D      +E+ K         + G +M            TG++ + A++I ILS A   P
Sbjct: 99  DQVGDEPYEVFKHADLGDFFGVSGEIMKTD---------TGEVTIKAKEIVILSKALR-P 148

Query: 112 LPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           LP           R++ R+LDL   +++  +  +KR++II+ +R  +    +IE  TP+L
Sbjct: 149 LPDKYHGLTNVEQRYRQRYLDLISNKESFDR-FMKRSQIISEIRRYLDGHGYIEVETPVL 207

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + L+  G ++ ++I   FR+E   + 
Sbjct: 208 HNQAGGAAARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTT 266

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICY 279
             P EF  L+   ++ +  D+++  E ++R   E+  +  T+         +++F RI  
Sbjct: 267 HNP-EFTMLEAYTAYTDFKDVMDLTEGIIRNAAEKVLHTATIQYDGQEVDLASDFARIHM 325

Query: 280 DDAIR 284
            DAI+
Sbjct: 326 VDAIK 330



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP
Sbjct: 459 ALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 494


>gi|154274514|ref|XP_001538108.1| lysyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150414548|gb|EDN09910.1| lysyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 609

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 124/253 (49%), Gaps = 11/253 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           +R++G ++  R  G  +IF DIR      QV     +   +I    + E +   D + ++
Sbjct: 128 LRIAGRIYTKRSAGAKLIFYDIRAEGVKIQVACQAQNVKGDIPFEDQHEHLRRGDIVGIV 187

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A ++ +L+    ++P   +G R+  +  R++ R+LDL  + 
Sbjct: 188 GFPGRTAPKNRADGELSIFATEVVLLAPCLHQIPSEHYGLRD--QEQRYRQRYLDLIMND 245

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP-SRVNQGSFYAL 194
             +N+ V R+++I+ +R      +F+E  TP++ T +    A+ F+   + +N   F  L
Sbjct: 246 RSRNVFVTRSKMISYIRRFFDERDFVEVETPMMNTIAGGATAKPFITHHNDLNMDMF--L 303

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  DI+N  E
Sbjct: 304 RVAPELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDIMNVTE 362

Query: 255 NVLRGVFEEFSNG 267
            ++ G+ +  + G
Sbjct: 363 ELVSGLVKHITGG 375



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 541 SLEFGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576


>gi|239908486|ref|YP_002955228.1| lysyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239798353|dbj|BAH77342.1| lysyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 510

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 130/297 (43%), Gaps = 30/297 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEW 69
            ++++G   RL+G +  +R  G + F  I+D  G  QV A  ++     + + K      
Sbjct: 63  ALAELGRTFRLAGRIVSLRSFGKVAFFTIQDASGRIQVFAERETLGQEAYTVFKKFDIGD 122

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKY 128
           ++ + G +             TG++ L A  + +++ +   LP    G ++     R++ 
Sbjct: 123 IVGVTGRLFRTK---------TGELTLHADTLSLVTKSMRPLPEKYHGLKDV--ETRYRQ 171

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSR 185
           R++DL        I K RT II  +R  + +  F+E  TP++ A  P G  AR F+    
Sbjct: 172 RYVDLIVTPRSVEIFKARTTIIRELRAFLDSSGFMEVETPMMQA-IPGGATARPFVTHHN 230

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y +  AP+ Y + L+  GF++ +++   FR+E   +   P EF   +   ++  
Sbjct: 231 ALDMGLY-MRIAPELYLKRLLVGGFEKVYEVGRNFRNEGVSTRHNP-EFTMCEFYWAYAR 288

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPDL 293
             D+++  E +   + +  +    VS           + R+ + ++I + G   P++
Sbjct: 289 YTDLMDLTERLFARLAKAVTGSEAVSYQGQEINLAPGWARLSFHESIEKVGGIDPEI 345



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL    ++REV LFP+
Sbjct: 464 RALEYGMPPAAGEGIGIDRLVMLLTDQASIREVILFPL 501


>gi|307243777|ref|ZP_07525911.1| lysine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492853|gb|EFM64872.1| lysine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 636

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 115/246 (46%), Gaps = 19/246 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74
           G  V L+G +   R  G   F+ ++D  G  Q     D      +++ K+     ++ I+
Sbjct: 58  GQKVSLAGRIMSKRIMGKASFMHLQDQNGRIQAYVKRDDIGVDEYKLFKTYDIGDIVGIE 117

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
           G V     E ++ ++         +K+ +LS + + LP    G ++    +R++ R++DL
Sbjct: 118 GFVFKTKTEEVSVHV---------EKLVLLSKSLQVLPEKYHGLKDV--DLRYRQRYVDL 166

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +   K+  + RT+ + ++R  +    F+E  TPIL T +    AR F+          
Sbjct: 167 IVNPEVKDAFLTRTKALKALRSYLDERGFLEVETPILNTIAGGANARPFITHHNTLDIPM 226

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + Y + L+  GFD+ +++   FR+E       P E+  +++  ++ +  D+++
Sbjct: 227 Y-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDMKHNP-EYTAIELYQAYADYKDMMD 284

Query: 252 TMENVL 257
             ENV+
Sbjct: 285 ITENVI 290



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 28/43 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + G+PP GG+  GIDR++MLL  +  +R+V LFP  +   D
Sbjct: 455 ALEVGLPPTGGLGIGIDRVIMLLTDSTTIRDVLLFPTMKPLRD 497


>gi|160901648|ref|YP_001567229.1| lysyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160359292|gb|ABX30906.1| lysyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 502

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 112/253 (44%), Gaps = 20/253 (7%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS-----EWVLCIDGLVMS 79
           G +  +R HG   F D++D +G  QV    D    E     +      +W+  I G    
Sbjct: 58  GRLMNLRKHGKSAFADLKDEFGRIQVYIRLDQVGQENYDFFKEYIDIGDWI-GIKGYPFK 116

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138
                      TG++ L A  IE+LS A   PLP        + +R++ R++D+   D  
Sbjct: 117 TR---------TGELTLLALDIELLSKAIR-PLPEKWHGLKDKEVRYRQRYVDMIANDDT 166

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            K +  R  II  +R  +  + F+E  TP+L +      AR F+    V     Y L  A
Sbjct: 167 IKTLRTRFLIIKYIREYLNNKGFLEVETPVLQSIMGGANARPFITHLNVYDIDMY-LRIA 225

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G ++ ++I   FR+E   +   P EF  +++  +F + +D++   E++L
Sbjct: 226 TELHLKRLVVGGMEKVYEIGKIFRNEGVSNKHNP-EFTSIELYQAFADYNDMMELTEDLL 284

Query: 258 RGVFEEFSNGNTV 270
             + ++  N   +
Sbjct: 285 YNITKKVHNKAKI 297



 Score = 44.3 bits (103), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 4/88 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPH 536
           +++L+  G EIA+     +  +   + F      KE+ +     +     RA + G+PP 
Sbjct: 395 RFELIIKGNEIANAFSELNDPQDQFERFKKQMELKELGDEEAQMMDLDFIRALEYGLPPT 454

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GG+  GIDR+ MLL     +R++  FP+
Sbjct: 455 GGLGIGIDRVCMLLTDTPTIRDIIPFPI 482


>gi|15890512|ref|NP_356184.1| lysyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|39932225|sp|Q8U7H6|SYK_AGRT5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|15158751|gb|AAK88969.1| lysyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 499

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 140/303 (46%), Gaps = 31/303 (10%)

Query: 2   HRYRTHSCGDLGVS--------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT S  +L           + G  V ++G V+  R  G  +F+DI D  G  Q+ ++
Sbjct: 37  HFHRTLSNAELAEKYADIEADVETGDTVTVAGRVYSSRNSG--MFMDIHDASGKVQIFSH 94

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D+      ++ R+   +   G ++  + +        G++ ++A++I +L+ +  LP+P
Sbjct: 95  KDTT----PEAARNLLPMIDIGDIIGVTGKVRRTK--RGELTINAEEITMLTKSL-LPMP 147

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL-TA 171
                     +R++ R LD+  +   K   ++R++I++ +R  M AE F+E  TP+L T 
Sbjct: 148 EKWHGVSDIELRYRKRHLDILANEDSKLRFLQRSKILSGIRRFMEAEGFLEVETPMLQTV 207

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRL 230
                A  F       +   Y L  AP+ + +  + SG  D+ F+I   FR+E   +   
Sbjct: 208 YGGATADPFKTFHNTLKMDMY-LRIAPELFLKRTLVSGLSDKVFEINRNFRNEGVSTRHN 266

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENV-------LRGVFEEFSNGNTVS--NNFLRICYDD 281
           P EF  ++   ++ + +DI+  +E +       L G  E    G T+S    F R+   D
Sbjct: 267 P-EFTMMECYWAYADYEDIMGLVERLFETLAIALHGTTEVEFQGQTISFKGPFKRVPMPD 325

Query: 282 AIR 284
           A++
Sbjct: 326 AVK 328



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 12/98 (12%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++  CN +E+ +           R  M E + QA +  G   + +++ F     A   G
Sbjct: 406 RFESYCNAWEVGNAFSELNDPEEQRRRMVEQLEQAHAR-GEKDKQLDDEF---LDAIDQG 461

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR++MLL  A ++R+V LFP  +N  D
Sbjct: 462 MPPAGGLGIGVDRLIMLLTNAPSIRDVILFPARRNKAD 499


>gi|327539372|gb|EGF25990.1| asparaginyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 466

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 106/264 (40%), Gaps = 30/264 (11%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRD--HYGITQVVANPDSACF--EIAKSVRSEWVLCIDG 75
           V + GW+   R   GG  FL++ D    G  QVVA  +   +  EI K           G
Sbjct: 23  VEIRGWIRTRRDSKGGFSFLEVNDGTSLGNLQVVAPAELENYAEEIQK--------LTAG 74

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +    E + +       EL A  + ++   +    P+  +R   E +R ++  L  R 
Sbjct: 75  CSVVVQGELVESPAKGQSTELHASSVRVIGWCDGETYPLQKKRHSFEKLR-EWSHLRART 133

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           +TL   +  R RI  S+      E F    TPI+TAS  EGA +    + +N        
Sbjct: 134 NTLGAVMRVRNRISQSIHRFFDDEGFNYLHTPIITASDCEGAGEMFRVTTLNLEKLAGSN 193

Query: 188 -----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                +  F+  P       QL     A+   R +   P FR E+  + R   EF+ ++ 
Sbjct: 194 RPFDTKQDFFQKPTHLTVSGQLEAETYATALSRVYTFGPTFRAENSNTSRHLAEFWMVEP 253

Query: 240 EMSFVEQDDILNTMENVLRGVFEE 263
           E +F + +D +   E  L+ VF +
Sbjct: 254 EAAFYDLNDNMQLAERFLKRVFSD 277


>gi|317061684|ref|ZP_07926169.1| asparaginyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313687360|gb|EFS24195.1| asparaginyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 461

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 125/307 (40%), Gaps = 57/307 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V+L  WV ++R      FL+I D   +   QVV +     F EI++   +  V+    LV
Sbjct: 19  VKLGAWVRKIRSQKNFGFLEINDGSFFNGIQVVFDSSLENFDEISRLSIASSVIVEGTLV 78

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            S  A         GQ  E+ A KIEI   A+ L  P+  +R   E +R K   L  R +
Sbjct: 79  KSEGA---------GQEFEVKASKIEICQKAD-LDYPLQNKRHSFEFLRTKSH-LRPRTN 127

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVN 187
           T       R+    ++      +NF+   TPI+T S  EGA +           +P + +
Sbjct: 128 TFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITGSDAEGAGEMFRITTLDLNDLPKKED 187

Query: 188 -----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                Q  F+          QL      + F   +   P FR E   + R   EF+ ++ 
Sbjct: 188 GTVNFQKDFFGKSTNLTVSGQLNGETYCAAFRNIYTFGPTFRAEYSNTARHASEFWMIEP 247

Query: 240 EMSFVEQDDILNTMENVL-----------------------RGVFEEFSNGNTVSNNFLR 276
           EM+F + D  ++  E ++                       +G+F++ +  N ++N+F R
Sbjct: 248 EMAFADLDVNMDIAEKMVKYIIRYVMDTCPEEMNFFNQFIEKGLFDKLN--NVLNNDFGR 305

Query: 277 ICYDDAI 283
           + Y +AI
Sbjct: 306 LSYTEAI 312



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E++ Q  S +G++KE     +       + G  PH G   G +R++M 
Sbjct: 384 EIIGGSQREDNLEILEQRISELGMNKE----DYSFYLDLRKYGSFPHSGYGLGFERMIMY 439

Query: 550 LLGAKNVREVSLFPMSQN 567
           L G  N+R+V  FP + N
Sbjct: 440 LTGMANIRDVIPFPRTPN 457


>gi|145503091|ref|XP_001437523.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124404673|emb|CAK70126.1| unnamed protein product [Paramecium tetraurelia]
          Length = 506

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 129/308 (41%), Gaps = 48/308 (15%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SACFEIAKSVRSEWV 70
           S +G  + L   +H  R  G I FL +R+++   Q V        S   +    +  E V
Sbjct: 44  STIGKTILLRARIHNSRMKGKIAFLVLRENWYTIQAVLTKGEQIGSQMIKYTGGINLESV 103

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVF-GERE----YP--- 121
           + I+ +V+  + +  +    T Q+EL  Q I ++S +  +LP  +    R+    YP   
Sbjct: 104 VDIEAVVLQTNFKIKDC---TQQVELHIQTIRVISRSITKLPFQIEEASRKIIDYYPNLQ 160

Query: 122 --------------------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENF 161
                               ++ R   R LDLR          ++ I    R  +I + F
Sbjct: 161 QQKQNEDQQQLIQIQDYQISQNQRLNNRVLDLRTPAKQAIFRVKSGIALLFRQFLIEKGF 220

Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           IE  TP L   + +           N  +F  L Q+  +YKQ+ + + F+R F+++P FR
Sbjct: 221 IEIHTPKLLGFNTKNNYCKFKLQYFNYQAF--LSQSSCKYKQMCLMADFERVFEVSPAFR 278

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMEN----VLRGVFEEFSNG-NTVSNNF- 274
                + R   EF  +D+EM   E   ++L+  E     +L+G+ ++F      ++  F 
Sbjct: 279 ALHGNTHRELCEFICMDLEMVIKENYTELLDLTEELCLFILKGIEKKFDQEIQIIAKQFQ 338

Query: 275 ---LRICY 279
              ++ICY
Sbjct: 339 FQPIKICY 346



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           Y     G EIASG  R H  E +      +G   +++++       +F+ G  PHGG A 
Sbjct: 421 YKFFLRGEEIASGHQRIHDPEHLNNQLKGIGQDAQLLKDYIN----SFRYGSYPHGGCAF 476

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R + L    KN+R  SLFP
Sbjct: 477 GLERFLYLYFDLKNIRNASLFP 498


>gi|289663373|ref|ZP_06484954.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289668829|ref|ZP_06489904.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 505

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 129/304 (42%), Gaps = 31/304 (10%)

Query: 5   RTHSCGDL-------------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL              +   G  V+++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPEALEASGGTVKMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  --ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
              N     +   K      ++ ++G  ++R+         TG++ + A  + +L+ +  
Sbjct: 101 LQGNVLGDAYTAFKGWDVGDIVAVEGW-LTRTK--------TGELSVKASALRLLTKSLR 151

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPI 168
            PLP           R++ R++DL      + + +KR++II +MR  + A  F+E  TP+
Sbjct: 152 -PLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPM 210

Query: 169 LTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +    P G  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   
Sbjct: 211 M-HYIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVS 268

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +   P EF  L++  ++    +I++  E V+R   +       VS +   I    A RR+
Sbjct: 269 TRHNP-EFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFRRW 327

Query: 287 GTDK 290
             D+
Sbjct: 328 RMDE 331



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASG-----GIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-RAFQCGMP 534
           +++L  NG E+A+G        +  +    Q  +  G   E +   F   Y RA + GM 
Sbjct: 413 RFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMH--FDADYIRALEYGMA 470

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 471 PTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|59798580|sp|Q7UHE1|SYN_RHOBA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|32448516|emb|CAD78031.1| asparaginyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 490

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 106/264 (40%), Gaps = 30/264 (11%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRD--HYGITQVVANPDSACF--EIAKSVRSEWVLCIDG 75
           V + GW+   R   GG  FL++ D    G  QVVA  +   +  EI K           G
Sbjct: 47  VEIRGWIRTRRDSKGGFSFLEVNDGTSLGNLQVVAPAELENYAEEIQK--------LTAG 98

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +    E + +       EL A  + ++   +    P+  +R   E +R ++  L  R 
Sbjct: 99  CSVVVQGELVESPAKGQSTELHASSVRVIGWCDGETYPLQKKRHSFEKLR-EWSHLRART 157

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           +TL   +  R RI  S+      E F    TPI+TAS  EGA +    + +N        
Sbjct: 158 NTLGAVMRVRNRISQSIHRFFDDEGFNYLHTPIITASDCEGAGEMFRVTTLNLEKLAGSN 217

Query: 188 -----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                +  F+  P       QL     A+   R +   P FR E+  + R   EF+ ++ 
Sbjct: 218 RPFDTKQDFFQKPTHLTVSGQLEAETYATALSRVYTFGPTFRAENSNTSRHLAEFWMVEP 277

Query: 240 EMSFVEQDDILNTMENVLRGVFEE 263
           E +F + +D +   E  L+ VF +
Sbjct: 278 EAAFYDLNDNMQLAERFLKRVFSD 301


>gi|281342432|gb|EFB18016.1| hypothetical protein PANDA_017574 [Ailuropoda melanoleuca]
          Length = 625

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 154 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQ 213

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 214 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 262

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 263 ILNDFVRQKFIIRSKIITYIRTFLDELGFLEIETPMMNVI-PGGAVAKPFITYHNELDMN 321

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 322 LY-MRVAPELYHKILVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 379

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 380 EITEKMISGMVQHITGSYKVT 400



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDRI M L  + N++EV LFP
Sbjct: 564 ALEYGLPPTAGWGMGIDRITMFLTDSNNIKEVLLFP 599


>gi|149180413|ref|ZP_01858918.1| lysyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148852605|gb|EDL66750.1| lysyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 477

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 117/263 (44%), Gaps = 16/263 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + D    +R +G +  +R    ++F+ I D  G  Q++        EI + + +++    
Sbjct: 31  MKDGAEGIRAAGRITGIRSFSKLLFITISDIQGSLQLLLKKQ----EIGEGLFNKFEQFF 86

Query: 74  D-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           D G  +    +       TG+  L  +K E L  A   PLP          +R++ R+LD
Sbjct: 87  DIGDFIGVEGKMYTTK--TGEKTLRIEKYEFLGKALR-PLPEKWHGISNIELRYRQRYLD 143

Query: 133 -LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            L  +     ++ R++++ S+R     ++FIE  TP+L  +S  GA     P +    + 
Sbjct: 144 MLMTEETQNRVLARSQMVRSIRRFFEDQDFIEVETPVLQHTSS-GA--LAKPFKTYHNAL 200

Query: 192 ---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
                L  AP+ Y + L+  G+ + F++A CFR+E      L  EF  ++   +F   +D
Sbjct: 201 DTELNLRIAPETYLKRLIVGGYTKIFEVAKCFRNEGVSPQHLQ-EFTMVEGYAAFWNYED 259

Query: 249 ILNTMENVLRGVFEEFSNGNTVS 271
            +  M  ++  V +   N  T++
Sbjct: 260 TMRLMRKMILSVLQNTFNTTTIT 282


>gi|49481692|ref|YP_038607.1| asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|162382772|ref|YP_896857.2| asparaginyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|229186812|ref|ZP_04313967.1| Asparaginyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|59798536|sp|Q6HCW9|SYN_BACHK RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|49333248|gb|AAT63894.1| asparagine--tRNA ligase (asparaginyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|228596549|gb|EEK54214.1| Asparaginyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 463

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 128/327 (39%), Gaps = 61/327 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V   
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             ++ +  A+           E+ A+KI+I  +++    P+  +R   E +R       L
Sbjct: 77  GKVIATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T   +   R R I +       +   F+   TPI+T S  EGA +     RV     
Sbjct: 125 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 181

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             +P+                       Q      A  F   +   P FR E+  + R  
Sbjct: 182 NNVPKDEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270
            EF+ ++ E++F E  D++N  E++L+   +          EF N            N +
Sbjct: 242 AEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVI 301

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F RI Y +AI+       D + P+
Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328


>gi|15896505|ref|NP_349854.1| asparaginyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|20139906|sp|Q97E56|SYN_CLOAB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|15026334|gb|AAK81194.1|AE007821_11 Aspartyl/asparaginyl-tRNA synthetase [Clostridium acetobutylicum
           ATCC 824]
 gi|325510663|gb|ADZ22299.1| asparaginyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 463

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 142/357 (39%), Gaps = 75/357 (21%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCID 74
           G  VRLSGWV  +R      F++I D   +   QVV +     F EI+K + S  +    
Sbjct: 18  GKKVRLSGWVRTIRASKSFGFIEINDGSFFKNIQVVFDDKLDNFKEISKFIISSTITVEG 77

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
             V++ +A+               Q  EI   AE + L    + +YP  ++ K   L+  
Sbjct: 78  EFVLTPNAK---------------QPFEIH--AENITLEGNSDNDYP--LQKKRHTLEYL 118

Query: 135 RDTLHKNIVKRTRIINSM-RCRMIA----------ENFIECSTPILTASSPEGA------ 177
           R   H  +  R+   +++ R R +A           +F+  +TP++TAS  EGA      
Sbjct: 119 RSIAH--LRPRSNTFSAVFRVRSLAAYAVHKFFQERDFVYVNTPLITASDAEGAGEMFQV 176

Query: 178 --RDFLVPSRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPR 226
              D   P +  +G+      F+          QL     A  F   +   P FR E+  
Sbjct: 177 TTLDLKNPPKNEEGNIDFSKDFFGKKANLTVSGQLSAETFALAFRNVYTFGPTFRAEESN 236

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG--------- 267
           + R   EF+ ++ EM+F E  D L+T E +++ +            EF N          
Sbjct: 237 TTRHAAEFWMIEPEMAFAELSDYLDTAEEMVKYIINFVMENAPEEMEFFNTRIDKGLFDR 296

Query: 268 --NTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
             N V++ F RI Y +A+            P+   +   TEH  +   +VF K L V
Sbjct: 297 LHNVVNSEFGRITYTEAVDILEKSGEKFEYPVKWGIDLQTEHERYLTDKVFKKPLFV 353


>gi|195448202|ref|XP_002071554.1| GK25859 [Drosophila willistoni]
 gi|194167639|gb|EDW82540.1| GK25859 [Drosophila willistoni]
          Length = 578

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 116/248 (46%), Gaps = 20/248 (8%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G VH +R  G  +IF D+R      QV+A+        AKS +SE     D   + 
Sbjct: 110 VSVAGRVHAIRESGAKLIFYDLRGEGVKLQVMAS--------AKSYKSEEAFVSDTDKLR 161

Query: 80  RS----AETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL- 133
           R      +        G++ +   +I++LS     LP   FG ++  +  RF+ R+LDL 
Sbjct: 162 RGDIIGVQGHPGKTKKGELSIMPTEIKLLSPCLHMLPHLHFGLKD--KETRFRQRYLDLI 219

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
             + + +    R +II+ +R  +    F+E  TP++   +    A+ F+      +   +
Sbjct: 220 LNNKVRETFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFITHHNDLKMDLF 279

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D+++ 
Sbjct: 280 -MRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYADVMDI 337

Query: 253 MENVLRGV 260
            E ++ G+
Sbjct: 338 TEQMVSGM 345



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 520 ALEYGLPPTGGFGMGIDRLTMFLTDSNNIKEVLLFP 555


>gi|296473717|gb|DAA15832.1| asparaginyl-tRNA synthetase [Bos taurus]
          Length = 559

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 117/289 (40%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  +++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 136 GQRIKVFGWVHRLRRQGKNLMFLVLRDGTGFLQCVLS-DDLC------------QCYNGV 182

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 183 VLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 242

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ I    R       + E + P L  +  EG           
Sbjct: 243 NRHMMIRGENMSKILKARSVITRCFRDHFFDRGYHEITPPTLVQTQVEGGATLFKLDYFG 302

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + ++  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  +
Sbjct: 303 EEAY--LTQSSQLYLETCIPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFE 359

Query: 248 DILNTMENVLRGVFEEF---SNGNTVSN----------NFLRICYDDAI 283
           ++LN +E+++  V +       GN V +           F R+ Y DAI
Sbjct: 360 ELLNRLEDLVCDVVDRVLKSPAGNIVRDLNPNFKPPKRPFKRMNYSDAI 408


>gi|221132051|ref|XP_002158421.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 568

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 26/251 (10%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFE-----IAKSVRSEWVLCID 74
           V ++G +H  R  G  +IF D+R      Q++A+  +   E     I   +R   ++ + 
Sbjct: 108 VSVAGRIHAKRISGPKLIFYDLRGEGVKIQIMADHKNKSSEQDFAAIHGKLRRGDIVGVT 167

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G    R  ++       G++ +    IE+LS     LP   FG ++  +  RF+ R+LD+
Sbjct: 168 G----RPGKSKK-----GELSIQPTNIELLSPCLHMLPHLHFGLKD--KETRFRQRYLDI 216

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP-SRVNQG 189
              + + +    R+RIIN +R  +    F+E  TP++    P GA  + F+   + +N  
Sbjct: 217 ILNEQVRQKFYTRSRIINYVRKYLDQLGFLEIETPMMNMI-PGGATAKPFITHHNDLNMD 275

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            F  L  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D+
Sbjct: 276 LF--LRVAPELYHKMLVVGGIDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYMAYADYNDV 332

Query: 250 LNTMENVLRGV 260
           +   E +L G+
Sbjct: 333 IEITEKMLSGM 343



 Score = 40.4 bits (93), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 22/40 (55%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   A + G+PP  G   GIDR+ M    + N++EV  FP
Sbjct: 516 GFCTALEYGLPPTAGWGMGIDRLCMFFTDSNNIKEVLFFP 555


>gi|167394823|ref|XP_001741114.1| lysyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165894451|gb|EDR22438.1| lysyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar
           SAW760]
          Length = 768

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 6/151 (3%)

Query: 122 ESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGAR 178
           +  RF+ R+LDL    +T+ KN V RT+++ ++R  +  + F+E  TPIL T      AR
Sbjct: 151 QETRFRKRYLDLIVNPETV-KNFVLRTKVVKAVRKYLDDKGFLEVETPILNTIPGGATAR 209

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+          Y +  AP+ Y + L+  G +R ++I   FR+E       P EF   +
Sbjct: 210 PFITHHNQLDIQMY-MRIAPELYLKELIVGGINRVYEIGRLFRNEGIDQTHNP-EFTTCE 267

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
             M++ + +DI+   E +L  + ++ + G+T
Sbjct: 268 FYMAYADYNDIMKMTEELLGNIVKDITGGST 298



 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A +   PP GG   GIDR+ MLL    N++EV LFP
Sbjct: 522 AIEHAFPPTGGWGLGIDRLSMLLADVDNIKEVILFP 557


>gi|329925492|ref|ZP_08280366.1| lysine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328939775|gb|EGG36115.1| lysine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 505

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 119/257 (46%), Gaps = 19/257 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77
           V L+G +   R  G   F  I+D  G  Q+    DS   A +E    +    ++ + G++
Sbjct: 70  VNLAGRIMAKRGMGKASFAHIQDLSGRIQIYVRQDSVAEAQYEAFSILDLGDIIGVKGVL 129

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
                        TG+  +  +++E+LS +   LP    G ++    +R++ R++DL  +
Sbjct: 130 FKTK---------TGETTVKVKELEVLSKSLYPLPEKFHGLKDV--ELRYRQRYVDLIIN 178

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
             + K  + R+RII SMR  + ++ ++E  TP L + +    AR F+          Y +
Sbjct: 179 PDVQKTFITRSRIIQSMRRYLDSQGYLEVETPTLHSIAGGAAARPFITHHNALDMELY-M 237

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G ++ ++I   +R+E   +   P EF  +++  ++ +  DI+   E
Sbjct: 238 RIAIELHLKRLIVGGLEKVYEIGRVYRNEGISTRHNP-EFTMIELYEAYADYKDIMALTE 296

Query: 255 NVLRGVFEEFSNGNTVS 271
           N++  + +E      +S
Sbjct: 297 NLIAHIAQEVLGTQVIS 313



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 30/41 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           RA + GMPP GG+  GIDR++MLL  + ++R+V LFP  +N
Sbjct: 463 RALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLFPHMRN 503


>gi|326496086|dbj|BAJ90664.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 535

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/324 (21%), Positives = 127/324 (39%), Gaps = 60/324 (18%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE 68
           D G S VG  + + GWV   R    + F+++ D   ++  Q V  P++  ++   S+ + 
Sbjct: 73  DQGTSWVGKELTVRGWVRTCRAQRTVTFVEVNDGSCLSNMQCVLTPETEGYDQIDSITTG 132

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + ++G+V S             +++L   KI ++  ++    P+  +R   E +R   
Sbjct: 133 ASVLVEGVVASSQGGK-------QKVDLKVSKIIVIGESDPTSFPIQKKRASREFLR-TV 184

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-RDFLVPSRVN 187
             L  R +T       R  +  +         FI  S+PI+TAS  EGA   F V + ++
Sbjct: 185 AHLRPRTNTFGAVARVRNALAYATHNFFQDNGFIWVSSPIITASDCEGAGEQFYVTTLLS 244

Query: 188 QGS---------------------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDE 223
             +                     F+  P       QL     AS     +   P FR E
Sbjct: 245 NSAEGGCLVNSIPSKDGRVDWSQDFFCKPAFLTVSGQLNGETYASALSDIYTFGPTFRAE 304

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDD------------ILNTMEN-----------VLRGV 260
           +  + R   EF+ ++ E++F + +D            +   +EN           V +G+
Sbjct: 305 NSNTSRHLAEFWMIEPELAFADLNDDMACASAYLQYVVKYILENCKEDMDFFDTWVEKGI 364

Query: 261 FEEFSNGNTVSNNFLRICYDDAIR 284
            +  +  N    NF+++ Y DAI+
Sbjct: 365 IDRLN--NVAEKNFVQMSYSDAIK 386


>gi|257464166|ref|ZP_05628547.1| asparaginyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 463

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 125/307 (40%), Gaps = 57/307 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V+L  WV ++R      FL+I D   +   QVV +     F EI++   +  V+    LV
Sbjct: 21  VKLGAWVRKIRSQKNFGFLEINDGSFFNGIQVVFDSSLENFDEISRLSIASSVIVEGTLV 80

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            S  A         GQ  E+ A KIEI   A+ L  P+  +R   E +R K   L  R +
Sbjct: 81  KSEGA---------GQEFEVKASKIEICQKAD-LDYPLQNKRHSFEFLRTKSH-LRPRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVN 187
           T       R+    ++      +NF+   TPI+T S  EGA +           +P + +
Sbjct: 130 TFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITGSDAEGAGEMFRITTLDLNDLPKKED 189

Query: 188 -----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                Q  F+          QL      + F   +   P FR E   + R   EF+ ++ 
Sbjct: 190 GTVNFQKDFFGKSTNLTVSGQLNGETYCAAFRNIYTFGPTFRAEYSNTARHASEFWMIEP 249

Query: 240 EMSFVEQDDILNTMENVL-----------------------RGVFEEFSNGNTVSNNFLR 276
           EM+F + D  ++  E ++                       +G+F++ +  N ++N+F R
Sbjct: 250 EMAFADLDVNMDIAEKMVKYIIRYVMDTCPEEMNFFNQFIEKGLFDKLN--NVLNNDFGR 307

Query: 277 ICYDDAI 283
           + Y +AI
Sbjct: 308 LSYTEAI 314



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E++ Q  S +G++KE     +       + G  PH G   G +R++M 
Sbjct: 386 EIIGGSQREDNLEILEQRISELGMNKE----DYSFYLDLRKYGSFPHSGYGLGFERMIMY 441

Query: 550 LLGAKNVREVSLFPMSQN 567
           L G  N+R+V  FP + N
Sbjct: 442 LTGMANIRDVIPFPRTPN 459


>gi|259501003|ref|ZP_05743905.1| lysine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302190548|ref|ZP_07266802.1| lysyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309803748|ref|ZP_07697834.1| lysine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|309804565|ref|ZP_07698630.1| lysine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|309808736|ref|ZP_07702622.1| lysine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|309809596|ref|ZP_07703453.1| lysine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|312871562|ref|ZP_07731655.1| lysine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312874310|ref|ZP_07734342.1| lysine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|315653937|ref|ZP_07906853.1| lysine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325912448|ref|ZP_08174843.1| lysine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|329920483|ref|ZP_08277215.1| lysine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|259167697|gb|EEW52192.1| lysine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|308164157|gb|EFO66418.1| lysine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308165957|gb|EFO68175.1| lysine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308167972|gb|EFO70104.1| lysine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308170077|gb|EFO72113.1| lysine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|311090183|gb|EFQ48595.1| lysine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311092957|gb|EFQ51308.1| lysine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|315488633|gb|EFU78279.1| lysine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325475790|gb|EGC78961.1| lysine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|328936159|gb|EGG32612.1| lysine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 503

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 23/273 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            R++G +   R  G + F DI D  G  Q+    D      ++I K       L IDG V
Sbjct: 60  TRVAGRMLAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYQIFKQADLGDFLGIDGHV 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--R 134
           M            TG++ + A  I  LS A   PLP  +   +  E I ++ R+LDL   
Sbjct: 120 MKTD---------TGELTIRASHITFLSKALR-PLPDKYHGLQNVEQI-YRQRYLDLISN 168

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
           +D+ +K  + RT+II ++R  + + +F+E  TP+L  + P G  AR F+        + Y
Sbjct: 169 QDS-YKRFLNRTKIIQAIRDYLNSLDFLEVETPVL-HNIPGGAEARPFITHHNALDINLY 226

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                    K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++ 
Sbjct: 227 MRIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELETYCAYWDFHDVMDE 284

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            E ++R   +  S    ++     I    + RR
Sbjct: 285 AEGIIRAAAKVVSEDGKINYQGTDIDLGKSFRR 317



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 2/47 (4%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM--SQNFCDL 571
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP    + F DL
Sbjct: 453 RAMEFGMPPTGGLGIGIDRLVMLLTNAPAIRDVLLFPTMRPERFDDL 499


>gi|256821964|ref|YP_003145927.1| lysyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256795503|gb|ACV26159.1| lysyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 499

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 128/289 (44%), Gaps = 30/289 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69
           + ++G  V+++G +   R  G   F+ I+D  G  Q     D+   ++    ++ W    
Sbjct: 57  LEELGKQVKVAGRIMLFRNMGKASFITIQDMSGRIQSYVRKDAVGDDVYDDFKT-WDIGD 115

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           ++ I+G V   +          G++ + A  I +L+ A   PLP        +  R++ R
Sbjct: 116 IVGIEGTVFKTNK---------GELSVKASNIRLLTKALR-PLPDKWSGLSDQETRYRQR 165

Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186
           ++DL   +   +  + R++++ ++R  + + +F+E  TP++    P GA  R F      
Sbjct: 166 YVDLIVNEESRETFIIRSKVVKAIRDFLESRDFLEVETPMMHVI-PGGASARPFETHHNA 224

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  AP+ Y + L+  G ++ ++I   FR+E   +   P EF  L+    + + 
Sbjct: 225 LDMPLY-LRVAPELYLKRLVVGGLEKVYEINRNFRNEGLSTRHNP-EFTMLEFYWGYADY 282

Query: 247 DDILNTMENVLR---------GVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +D+++  E +LR          VFE           F R+   +AI +Y
Sbjct: 283 NDLMDLTEAMLRHTVETVLGKTVFESSGETYDFGKPFARMTVLEAITKY 331



 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G E+A+G    + +E   + F     +K+  ++    +   Y RA + G+PP 
Sbjct: 408 RFEFFAGGRELANGFSELNDAEDQAERFKAQVEAKDAGDDEAMHYDADYIRALEYGLPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTDSPSIRDVLLFP 494


>gi|153003984|ref|YP_001378309.1| lysyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152027557|gb|ABS25325.1| lysyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 520

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 109/260 (41%), Gaps = 27/260 (10%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVMS 79
           ++G V  VRP G   FL +RD  G  QV    D      FEI K       L I  +V +
Sbjct: 72  IAGRVLAVRPFGKAAFLKVRDAAGELQVWLKKDRLPERDFEIYKQ------LDIGDIVAA 125

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----R 134
           +   T      TG++ L A    IL+ +   PLP           R++ R+LDL      
Sbjct: 126 QGGAT---RTKTGELTLEASGFTILTKSMR-PLPEKWHGLTDVEQRYRQRYLDLVATPGV 181

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSF 191
           RDT     VKR RI++++R  +    ++E  TP L      G   AR F           
Sbjct: 182 RDTF----VKRARIVSTIRRFLDGRGYLEVETPTLHKPEEAGGAAARPFETHHNALDLDL 237

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  A + + + L+  GFDR ++I   +R+E       P EF  ++   ++   +D++ 
Sbjct: 238 -KLRIATELHLKRLVVGGFDRVYEIGRIWRNEGIDRRHNP-EFTSIEFYQAYATAEDLMR 295

Query: 252 TMENVLRGVFEEFSNGNTVS 271
             E +   +  E +    V+
Sbjct: 296 LTEELFHALAVEVTGAPVVT 315



 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+ MLL  + ++R+V LFP+
Sbjct: 478 RALEHGMPPTAGEGIGIDRVAMLLTDSASIRDVILFPL 515


>gi|197100346|ref|NP_001126762.1| aspartyl-tRNA synthetase, mitochondrial [Pongo abelii]
 gi|55732562|emb|CAH92981.1| hypothetical protein [Pongo abelii]
          Length = 171

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 6/125 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNACGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCDAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166

Query: 122 ESIRF 126
           E++R 
Sbjct: 167 EALRL 171


>gi|312872573|ref|ZP_07732641.1| lysine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311091935|gb|EFQ50311.1| lysine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
          Length = 503

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 23/273 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            R++G +   R  G + F DI D  G  Q+    D      ++I K       L IDG V
Sbjct: 60  TRVAGRMLAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYQIFKQADLGDFLGIDGHV 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--R 134
           M            TG++ + A  I  LS A   PLP  +   +  E I ++ R+LDL   
Sbjct: 120 MKTD---------TGELTIRASHITFLSKALR-PLPDKYHGLQNVEQI-YRQRYLDLISN 168

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
           +D+ +K  + RT+II ++R  + + +F+E  TP+L  + P G  AR F+        + Y
Sbjct: 169 QDS-YKRFLNRTKIIQAIRDYLNSLDFLEVETPVL-HNIPGGAEARPFITHHNALDINLY 226

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                    K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++ 
Sbjct: 227 MRIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELETYCAYWDFHDVMDE 284

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            E ++R   +  S    ++     I    + RR
Sbjct: 285 AEGIIRAAAKVVSEDGKINYQGTDIDLGKSFRR 317



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 2/47 (4%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM--SQNFCDL 571
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP    + F DL
Sbjct: 453 RAMEFGMPPTGGLGIGIDRLVMLLTNAPAIRDVLLFPTMRPERFDDL 499


>gi|295698347|ref|YP_003603002.1| lysyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157192|gb|ADD79637.1| lysyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 490

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/318 (22%), Positives = 142/318 (44%), Gaps = 22/318 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  + ++V +SG +   R  G   F  ++D  G  QV  + +    EI +    ++  C 
Sbjct: 44  LKKLENYVSVSGRMISKRIFGKASFFTLQDMSGKIQVYVSSNHIKEEIYEK---KFKKCN 100

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLD 132
            G ++    +       TG++ +  +KI +L+ +   +    +G +   + I+ + R LD
Sbjct: 101 LGDLIGVHGKVFKTK--TGELTVDCRKIFLLTRSYRTISSKFYGLKN--KEIQHRNRCLD 156

Query: 133 LRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGS 190
           L  +   +N  + R++II+ +RC M  + F+E  TPI+        A+ F+      +  
Sbjct: 157 LILNQRSRNTFIIRSKIISWLRCFMNEKGFMEVETPIMQPMYGGASAKPFMTRHNALKSE 216

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  ++   ++    D++
Sbjct: 217 LY-LRIAPELYLKRLVIGGFEKIFEIGKNFRNEGVSTIHNP-EFTMMEFYEAYKNYLDLM 274

Query: 251 NTMENVLRGVFEEF--SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           + +EN+   + E     +G     NFL   +D   ++    +       I+ N++  F  
Sbjct: 275 DFIENLFHEIVESTLKKSGIKYGENFLN--FDKRFKKVTMKQS------ILQNISNQFSM 326

Query: 309 SEFRVFSKILSVNPGYEV 326
            +     K+ ++   Y V
Sbjct: 327 KDLENKDKVFTIARSYGV 344



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 8/92 (8%)

Query: 479 AFQYDLVCNGFEIASGGIR-----NHMSEVMLQAFSNVGISKEVVENRF--GGLYRAFQC 531
           A +++L   G+EIA+G        +  S  + Q+  N GI +++ E+ F       + + 
Sbjct: 395 AERFELFIGGYEIANGFSELNDPVDQTSRFLQQSRKN-GIRRDIDEDTFYDKDYITSLEY 453

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP  G+  GIDR+VMLL   +++R+V  FP
Sbjct: 454 GLPPTAGVGIGIDRLVMLLTNRRSIRDVIFFP 485


>gi|331266013|ref|YP_004325643.1| aspartyl/asparaginyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682685|emb|CBZ00302.1| aspartyl/asparaginyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 447

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 112/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F+  K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMEELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|169830349|ref|YP_001716331.1| lysyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
 gi|169637193|gb|ACA58699.1| lysyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
          Length = 490

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 116/251 (46%), Gaps = 17/251 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEIAKSVRSEWVLCID 74
           G  + L+G +   R HG   F D++D  G  Q    + +     +E+ K++     + I 
Sbjct: 52  GRELSLAGRLMAKRGHGKAAFGDLQDGSGKVQAYFRLNDLGPEKYELFKTLDIGDFIGIR 111

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V             TG++ ++     +L+ +   PLP          +R++ R+LDL 
Sbjct: 112 GTVFKTR---------TGEVTVAVSDFVLLAKSLR-PLPEKWHGLKDVELRYRQRYLDLI 161

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
            +   + + V R+RII ++R  +    F+E  TP++ T +    AR F         S +
Sbjct: 162 INPQSREVFVTRSRIIAAIRRYLDENGFLEVETPMMQTLAGGAVARPFKTYHNALGISLF 221

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  GFD+ ++I   FR+E   +   P EF  L++  ++ +  D++N 
Sbjct: 222 -LRIAPELYLKRLLVGGFDKVYEINRNFRNEGISTRHNP-EFTMLEIYEAYADYHDMMNL 279

Query: 253 MENVLRGVFEE 263
            E ++  V E+
Sbjct: 280 TERLISSVIEQ 290



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 28/37 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR++MLL  + ++R+V LFP+
Sbjct: 448 ALEYGMPPAGGLGIGIDRLIMLLTDSPSIRDVILFPL 484


>gi|114052923|ref|NP_001040037.1| asparaginyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|193806383|sp|Q2KJG3|SYNC_BOVIN RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|86823811|gb|AAI05359.1| Asparaginyl-tRNA synthetase [Bos taurus]
          Length = 559

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 117/289 (40%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  +++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 136 GQRIKVFGWVHRLRRQGKNLMFLVLRDGTGFLQCVLS-DDLC------------QCYNGV 182

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 183 VLSTESSVAVYGVLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 242

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ I    R       + E + P L  +  EG           
Sbjct: 243 NRHMMIRGENMSKILKARSVITRCFRDHFFDRGYHEITPPTLVQTQVEGGATLFKLDYFG 302

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + ++  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  +
Sbjct: 303 EEAY--LTQSSQLYLETCIPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFE 359

Query: 248 DILNTMENVLRGVFEEF---SNGNTVSN----------NFLRICYDDAI 283
           ++LN +E+++  V +       GN V +           F R+ Y DAI
Sbjct: 360 ELLNRLEDLVCDVVDRVLKSPAGNIVRDLNPNFKPPKRPFKRMNYSDAI 408


>gi|321262346|ref|XP_003195892.1| lysine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317462366|gb|ADV24105.1| Lysine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 630

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 19/258 (7%)

Query: 21  VRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSAC-----FEIAKSVRSEWVLCID 74
           + L+G V+ +R     + F D++      Q++A   +A            +R   ++ + 
Sbjct: 156 ISLAGRVYTIRESSSKLRFYDLKADGVKVQIMAQAQNATSLEEYLNTHDRIRRGDIIGVT 215

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V SR+          G++ LS   I++LS    L LP   E       R++ R+LDL 
Sbjct: 216 G-VPSRTK--------MGELSLSISSIQLLSPCLHL-LP-GREGVVDLETRYRKRYLDLI 264

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +   ++I V R+++IN +R  + A+ F+E  TP+++  +        V    +      
Sbjct: 265 MNPSTRDIFVTRSKVINYIRKYLDAQGFLEVETPMMSMIAGGATAKPFVTHHNDLKLDLF 324

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  G DR F+I   FR+E       P EF   +  M++ +  DI++  
Sbjct: 325 LRIAPELYLKELVVGGLDRVFEIGRVFRNEQIDMTHNP-EFSICEFYMAYADMYDIMDMT 383

Query: 254 ENVLRGVFEEFSNGNTVS 271
           E ++ G+ +  + G  ++
Sbjct: 384 EELIEGMVKSLTGGTKLT 401



 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+VM L    N++EV LFP
Sbjct: 567 ALEYGLPPTGGWGLGIDRLVMFLTDCSNIKEVLLFP 602


>gi|270292428|ref|ZP_06198639.1| asparagine--tRNA ligase [Streptococcus sp. M143]
 gi|270278407|gb|EFA24253.1| asparagine--tRNA ligase [Streptococcus sp. M143]
          Length = 447

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 115/297 (38%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F+  K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFE------EFSNGNT------VSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +      E    +T      ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALEILERDTELLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|229087105|ref|ZP_04219255.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696173|gb|EEL49008.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 463

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 127/323 (39%), Gaps = 61/323 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V     ++
Sbjct: 21  VQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSSVKVEGKVI 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A+KI+I  +++    P+  +R   E +R       LR  T
Sbjct: 81  ATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHLRPRT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              +   R R I +       +   F+   TPI+T S  EGA +     RV       +P
Sbjct: 129 NAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDLNNVP 185

Query: 196 QAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           +                       Q      A  F   +   P FR E+  + R   EF+
Sbjct: 186 KGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFW 245

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNF 274
            ++ E++F E  D++N  E++L+   +          EF N            N ++++F
Sbjct: 246 MVEPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDF 305

Query: 275 LRICYDDAIRRYGTDKPDLRNPI 297
            RI Y +AI+       D + P+
Sbjct: 306 GRITYTEAIKVLQESDADFKYPV 328


>gi|307129434|ref|YP_003881450.1| Lysyl-tRNA synthetase (class II) [Dickeya dadantii 3937]
 gi|306526963|gb|ADM96893.1| Lysyl-tRNA synthetase (class II) [Dickeya dadantii 3937]
          Length = 505

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 19/281 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V ++G +   R  G   F+ ++D  G  Q+  + D     +      +W L   G 
Sbjct: 64  LGLEVNVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYNEQFKKWDL---GD 120

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +
Sbjct: 121 IVGARGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
              ++  + R++I+  +R  M+  +F+E  TP++        AR F+          Y L
Sbjct: 178 EESRHTFRVRSQIMAGIRQFMVGRDFMEVETPMMQVIPGGAAARPFITHHNALDIDMY-L 236

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E
Sbjct: 237 RIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIELTE 295

Query: 255 NVLRGVFE------EFSNGNTV---SNNFLRICYDDAIRRY 286
           ++ R + +      E   G+ V      F ++   +AI++Y
Sbjct: 296 SLFRTLAQDVLGATEVQYGDQVFDFGKPFEKLTMREAIKKY 336



 Score = 44.3 bits (103), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F +   +K+  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRLVMLFTNSHTIRDVILFP 499


>gi|332300671|ref|YP_004442592.1| Lysyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332177734|gb|AEE13424.1| Lysyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 579

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 130/296 (43%), Gaps = 43/296 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---------VL 71
           V ++G V   R  G   F++++D  G  QV    D  C    K + ++          ++
Sbjct: 57  VSIAGRVMSRRIMGKASFMELQDTSGRIQVYVTRDDLCPGEDKDLYNKLFKKLLDIGDIV 116

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--------PES 123
            + G V             TG+I + A+++ +LS A   PLP+   ++         PE 
Sbjct: 117 GVKGFVFRTQ---------TGEISVHAEELTLLSKALR-PLPIVKAKDDQVFDGFTDPE- 165

Query: 124 IRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDF 180
           +R++ R++DL   D +    VKRT+I  SMR    A  ++E  TP+L  S P G  AR F
Sbjct: 166 LRYRRRYVDLIVNDEVKGIFVKRTKIFQSMRNFFNARGYLEVDTPVLQ-SIPGGAAARPF 224

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + Y + L+  GF+  ++ +  FR+E       P EF  +++ 
Sbjct: 225 VTHHNALDIPLY-LRIANELYLKRLIVGGFEGVYEFSRNFRNEGMDRTHNP-EFTCMEIY 282

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           +++ +   ++   E ++  + +E     T+            + R+   DAI+ YG
Sbjct: 283 VAYKDYRWMMQMTEQMIEHICQEVLGSTTIQVGEHTIEFKPPYRRLTMIDAIQEYG 338



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VMLL G ++++EV LFP
Sbjct: 462 RALEFGMPPTSGMGIGMDRLVMLLTGQESIQEVLLFP 498


>gi|225561216|gb|EEH09497.1| lysyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 609

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 124/253 (49%), Gaps = 11/253 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           +R++G ++  R  G  +IF DIR      QV     +   +I    + E +   D + ++
Sbjct: 128 LRIAGRIYTKRSAGAKLIFYDIRAEGVKIQVACQAQNVKGDIPFEDQHEHLRRGDIVGIV 187

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                T   N   G++ + A ++ +L+    ++P   +G R+  +  R++ R+LDL  + 
Sbjct: 188 GFPGRTAPKNRADGELSIFATEVVLLAPCLHQIPSEHYGLRD--QEQRYRQRYLDLIMND 245

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP-SRVNQGSFYAL 194
             +N+ V R+++I+ +R      +F+E  TP++ T +    A+ F+   + +N   F  +
Sbjct: 246 RSRNVFVTRSKMISYIRRFFDERDFVEVETPMMNTIAGGATAKPFITHHNDLNMDMFLRV 305

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  DI+N  E
Sbjct: 306 --APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDIMNVTE 362

Query: 255 NVLRGVFEEFSNG 267
            ++ G+ +  + G
Sbjct: 363 ELVSGLVKHITGG 375



 Score = 38.9 bits (89), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 541 SLEFGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 576


>gi|55820759|ref|YP_139201.1| lysyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55736744|gb|AAV60386.1| lysyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
          Length = 511

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 114/251 (45%), Gaps = 19/251 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + ++     ++G +   R  G + F  I+D  G  Q+    D+     +EI K       
Sbjct: 71  LHEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRKDAVGEENYEIFKKADLGDF 130

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G +M             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 131 LGVEGEIMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLSDIETI-YRKR 179

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  + A+ F+E  TP+L   +   A    +     
Sbjct: 180 YLDLISNRESFDR-FVTRSKIISEIRRYLDAQGFLEVETPVLHNEAGGAAAKPFITHHNA 238

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 239 QNIDMVLRIATELHLKRLIVGGMERVYEIGRVFRNEGMDATHNP-EFTTIEVYQAYADFH 297

Query: 248 DILNTMENVLR 258
           DI+N  E +++
Sbjct: 298 DIMNLTEGIIQ 308



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 446 LSRFEAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 505

Query: 561 LFP 563
           LFP
Sbjct: 506 LFP 508


>gi|51891663|ref|YP_074354.1| lysyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|51855352|dbj|BAD39510.1| lysyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 495

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 123/272 (45%), Gaps = 18/272 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
            R++G V  VR HG I F  ++D  G  Q+         E+++  R  W     G ++  
Sbjct: 59  ARVAGRVVTVRSHGKIGFAHLQDGSGRLQIYLR----LPELSERERLVWEHLDLGDIVG- 113

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
            AE +     TG++ +  + + +L+ A   LP    G R+    +R++ R LDL  +   
Sbjct: 114 -AEGVLMRTRTGELTVKVESLTMLTKALRPLPDKHAGLRDV--ELRYRERHLDLLVNPES 170

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
           + + + R+RI+ S+R  +    FIE  TP+L   +    AR FL           +L  A
Sbjct: 171 RAVFEARSRIVASLRRTLDELGFIEVETPVLVPLAGGAAARPFLTYHNALDRQL-SLRIA 229

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME--- 254
            + + + L+  G +R ++I   FR+E   +   P EF  L+   ++ +  D+++  E   
Sbjct: 230 TELHLKRLVVGGMERVYEIGRVFRNEGLSTRHNP-EFTSLEAYQAYADYRDMMDLTERLV 288

Query: 255 -NVLRGVFEEFSNGNT-VSNNFLRICYDDAIR 284
            N  R V      G   ++  F RI   +A++
Sbjct: 289 QNAARAVNGSLRAGEIDLTGPFRRITMAEAVK 320



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 30/40 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG+  G+DR+VMLL GA ++R+V LFP  +N
Sbjct: 455 ALEVGLPPTGGLGIGVDRLVMLLTGAPSIRDVILFPTMRN 494


>gi|312874830|ref|ZP_07734849.1| lysine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311089575|gb|EFQ48000.1| lysine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 503

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 23/273 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            R++G +   R  G + F DI D  G  Q+    D      ++I K       L IDG V
Sbjct: 60  TRVAGRMLAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYQIFKQADLGDFLGIDGHV 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--R 134
           M            TG++ + A  I  LS A   PLP  +   +  E I ++ R+LDL   
Sbjct: 120 MKTD---------TGELTIRASHITFLSKALR-PLPDKYHGLQNVEQI-YRQRYLDLISN 168

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
           +D+ +K  + RT+II ++R  + + +F+E  TP+L  + P G  AR F+        + Y
Sbjct: 169 QDS-YKRFLNRTKIIQAIRDYLNSLDFLEVETPVL-HNIPGGAEARPFITHHNALDINLY 226

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                    K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++ 
Sbjct: 227 MRIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELETYCAYWDFHDVMDE 284

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            E ++R   +  S    ++     I    + RR
Sbjct: 285 AEGIIRAAAKVVSEDGKINYQGTDIDLGKSFRR 317



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 2/47 (4%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM--SQNFCDL 571
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP    + F DL
Sbjct: 453 RAMEFGMPPTGGLGIGIDRLVMLLTNAPAIRDVLLFPTMRPERFDDL 499


>gi|146328872|ref|YP_001209830.1| lysyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|229559857|sp|A5EY50|SYK_DICNV RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|146232342|gb|ABQ13320.1| lysyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 498

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 133/294 (45%), Gaps = 20/294 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIA 62
           +R    GD         V ++G +   R  G   F+ ++D  G   Q+  + D+   E+ 
Sbjct: 46  HRDFDHGDEAALSQAGTVAIAGRMMGKRVMGKASFVHVQDGSGEQIQLYVSSDALTEEVY 105

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  ++ W +   G ++  S         TG++ +    I +L+ +   PLP        +
Sbjct: 106 EEFKT-WDV---GDIIFASGSLFRTK--TGELTVQTNAIRLLTKSLR-PLPDKFHGLTDQ 158

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
            IR++ R++DL  +   +++ K R++II+ +R    A +F+E  TP++        A+ F
Sbjct: 159 EIRYRQRYVDLMVNAQSRDVFKARSKIISYIRHFFEARDFLEVETPMMHPIPGGAAAKPF 218

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  L+  
Sbjct: 219 ITHHNALDMPLY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSARHNP-EFTMLEFY 276

Query: 241 MSFVEQDDILNTMENVLRGVFE--------EFSNGNTVSNNFLRICYDDAIRRY 286
            ++ + +D+++  E + +G+ +        ++       + F R+   DA+ +Y
Sbjct: 277 QAYADYNDLMDLSEVLFQGLAQTILGTTKFDYQGTEIDFSQFRRLPMRDAVCQY 330



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+G    + +E   + F     + E  +       G   RA + G+PP 
Sbjct: 407 RFELFIGGREIANGFSELNDAEDQAERFKEQAAAFEAGDEEAMHYDGDFVRALEYGLPPT 466

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  A ++R+V LFP
Sbjct: 467 AGQGIGIDRLVMLLTNAPSIRDVLLFP 493


>gi|89094634|ref|ZP_01167571.1| lysyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89081104|gb|EAR60339.1| lysyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 500

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 122/262 (46%), Gaps = 22/262 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +++ G  V ++G V   R   G+I    +D  G  Q   N ++  F  AKS+    ++ +
Sbjct: 56  LAEAGIKVSIAGRVMLNRGAFGVI----QDMTGRIQFYVNKEARKF--AKSLDLGDIIGV 109

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +       +  ++  G+ +L  + +         PLP   +      IR++ R++DL
Sbjct: 110 TGELHKSGKGDLYVDL--GEYQLLTKNLR--------PLPDKHKGLQDTEIRYRQRYVDL 159

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
             +   + + + R++I++ +R  +    FIE  TP+L    P GA  R F+         
Sbjct: 160 ITNEDSRKVFEMRSKIVSGIRNYLTERRFIEAETPMLQVI-PGGATARPFITHHNALDRD 218

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   ++ +  D++
Sbjct: 219 MY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMIEFYQAYADYRDLM 276

Query: 251 NTMENVLRGVFEEFSNGNTVSN 272
           +  E++LR V ++     T+ N
Sbjct: 277 DLTEDMLRTVAQDVLGTTTIVN 298



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G E+A+G    + SE   + F      K+  ++    +   Y  A + G+PP 
Sbjct: 408 RFEFFVGGRELANGFSELNDSEDQAERFQQQVAEKDAGDDEAMHYDADYINALEYGLPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML   + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLFTDSPSIRDVILFP 494


>gi|332359710|gb|EGJ37527.1| asparagine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 448

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 112/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLVKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKFG-------YELDITDIEIIGESNDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAI 295



 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++   +++G+  +  E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNDLGM--DTTEYEFYLDLRKY--GTVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|219127934|ref|XP_002184180.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404411|gb|EEC44358.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 537

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 126/261 (48%), Gaps = 27/261 (10%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS------ACFEIAKSVRSEWVLC 72
           + V ++G +  VR  G + F D+R      Q++++  S      A F+I ++++   ++ 
Sbjct: 57  TIVSIAGRIVSVRGQGKLYFYDLRGDGTKVQIMSDLKSYAAGEEAFFKIHRTIKRGDIVG 116

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV----FGEREYPESIRFK 127
           + G    R  ++       G++ +   +I++LS     LP P      G     E+ R++
Sbjct: 117 VKG----RPGKSKK-----GELSIFPIEIQLLSPCLHMLPFPKGDSNLGGITNMET-RYR 166

Query: 128 YRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPS 184
            R+LDL  +  + K    R ++IN +R  +   +F+E  TP++    P GA  R F+   
Sbjct: 167 QRYLDLIVNADVRKTFEIRAKVINKIRKYLDERHFLEVETPMMNMI-PGGAVARPFVTYH 225

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  + L  AP+ Y ++L+  G DR ++I   FR+E       P EF  L+  M++V
Sbjct: 226 NDLSMDLF-LRIAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNP-EFTTLEFYMAYV 283

Query: 245 EQDDILNTMENVLRGVFEEFS 265
           + +D+++  E ++  + +E +
Sbjct: 284 DYNDLMDMCEELVSSMVKEIT 304



 Score = 43.9 bits (102), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   G+DR+ M L    N++EV LFP
Sbjct: 470 ALEHGLPPTGGFGLGVDRLTMFLSNKNNIKEVLLFP 505


>gi|18313730|ref|NP_560397.1| asparaginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|18161285|gb|AAL64579.1| asparaginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 431

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 114/283 (40%), Gaps = 38/283 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L GWV+R R      F+ +RD  G+ Q+V   +    + A+ +  E  + + G ++  
Sbjct: 21  VTLRGWVYRKRVLKEKAFILLRDSTGVIQLVFPRER--LKDAEELNLESSIVVTGALVRE 78

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPL---PVFGEREYPESIRFKYRFLDLRRDT 137
                      G +EL  + ++   + E  P+    V  + EY   +R     L +R   
Sbjct: 79  PR-------APGGVELHVESVDWAYIGEPYPINEDAVVADSEYLLDVRH----LWVRSRK 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           +   +  R  I  ++        F E  TP+   ++ EG           Q  +  L Q+
Sbjct: 128 MQAVLKIRHTIFGAIHEYFRKNGFYEVHTPMFITAAVEGGATLFKVDYFGQPVY--LTQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y ++L+ S  ++ + IAP FR E  R+ R   EF+  +MEM++   +D     E ++
Sbjct: 186 SQFYLEVLIYS-LEKVYVIAPSFRAEPSRTRRHLTEFWHAEMEMAWAGMNDAARVGEELI 244

Query: 258 RGVFE-----------------EFSNGNTVSNNFLRICYDDAI 283
             V E                 EF         F R+ YD+A+
Sbjct: 245 SYVVERVLAERQDELRLLGRRTEFL--ERAKPPFYRVSYDEAV 285


>gi|82916992|ref|XP_909898.1| PREDICTED: lysyl-tRNA synthetase-like isoform 1 [Mus musculus]
 gi|148703521|gb|EDL35468.1| mCG49108 [Mus musculus]
          Length = 595

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 121/261 (46%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +   R  GG +IF D+R      QV+AN      +     I   +R   ++ ++
Sbjct: 124 LKVAGRIQAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 183

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +  Q+I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 184 G---------NPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 232

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + + ++ R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 233 ILNDFVRQKLIVRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 291

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 292 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 349

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E +L G+ +  +    ++
Sbjct: 350 EITEKMLSGMVKSITGSYKIT 370



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 534 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 569


>gi|226328241|ref|ZP_03803759.1| hypothetical protein PROPEN_02134 [Proteus penneri ATCC 35198]
 gi|225202974|gb|EEG85328.1| hypothetical protein PROPEN_02134 [Proteus penneri ATCC 35198]
          Length = 402

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 5/174 (2%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   +   K    R++++
Sbjct: 30  TGELSVHCTEVRLLTKALR-PLPDKFHGLADQEMRYRQRYLDLISNEESRKTFQIRSQVM 88

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R  M+ + F+E  TP++ T      AR F+          Y L  AP+ Y + L+  
Sbjct: 89  AGIRQFMVNKGFMEVETPMMQTIPGGASARPFITHHNALDIDMY-LRIAPELYLKRLVVG 147

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           GFDR F+I   FR+E   S R   EF  +++ M++ +  D++   E + R + E
Sbjct: 148 GFDRVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYRDLIELTEELFRTLTE 200



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 361 ALEHGLPPTAGLGIGIDRMVMLFTDSHTIRDVILFP 396


>gi|296139451|ref|YP_003646694.1| lysyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296027585|gb|ADG78355.1| lysyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 1120

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 23/263 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFE 60
           R H  G    S   + V ++G V  VR +GG+ F+D+ +     QV+A     PD     
Sbjct: 664 RGHLNGLAPDSSTDTVVSVTGRVRGVRDYGGVTFVDLHEDRATLQVIAERGRTPD----- 718

Query: 61  IAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER- 118
               VR+ W   ID G ++S + E + ++  TG++ +  Q     ++A +   PV   R 
Sbjct: 719 ---DVRAFWRESIDMGDLVSVTGEMVTSH--TGELSVLLQD---WAMAGKCLSPVPKPRV 770

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              +  R + R LDL  D    +++ +R+R + +MR       F E  TP+L +      
Sbjct: 771 RLGDETRARSRSLDLMTDDGAVDLLYRRSRAVAAMRAAFTDRGFTEVETPMLQSVHGGAA 830

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F           Y L  AP+ Y + L   G  R F+I   FR+E   +   P EF  
Sbjct: 831 ARPFTTHINAYDMDLY-LRIAPELYLKRLAVGGMGRIFEINRNFRNEGADATHNP-EFTS 888

Query: 237 LDMEMSFVEQDDILNTMENVLRG 259
           L+   ++ +   +      V+ G
Sbjct: 889 LEAYEAYGDYTTMRTLTREVILG 911



 Score = 41.2 bits (95), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 13/91 (14%)

Query: 481  QYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            Q+DLV  G E+ +           R  +++  + A +    + E+ E+       A    
Sbjct: 1028 QWDLVGFGAELGTAYTELTDPIDQRERLTQQSMAAAAGDPEAMELDES----FLDALSYA 1083

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            MPP GG+  G+DRI+MLL G  N+R    FP
Sbjct: 1084 MPPTGGLGIGVDRIIMLLAGV-NIRATLAFP 1113


>gi|55822661|ref|YP_141102.1| lysyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|55738646|gb|AAV62287.1| lysyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 511

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 114/251 (45%), Gaps = 19/251 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + ++     ++G +   R  G + F  I+D  G  Q+    D+     +EI K       
Sbjct: 71  LHEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRKDAVGEENYEIFKKADLGDF 130

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G +M             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 131 LGVEGEIMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLSDIETI-YRKR 179

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  + A+ F+E  TP+L   +   A    +     
Sbjct: 180 YLDLISNRESFDR-FVTRSKIISEIRRYLDAQGFLEVETPVLHNEAGGAAAKPFITHHNA 238

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 239 QNIDMVLRIATELHLKRLIVGGMERVYEIGRVFRNEGMDATHNP-EFTTIEVYQAYADFH 297

Query: 248 DILNTMENVLR 258
           DI+N  E +++
Sbjct: 298 DIMNLTEGIIQ 308



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 446 LSRFEAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 505

Query: 561 LFP 563
           LFP
Sbjct: 506 LFP 508


>gi|167013425|pdb|3BJU|A Chain A, Crystal Structure Of Tetrameric Form Of Human Lysyl-Trna
           Synthetase
 gi|167013426|pdb|3BJU|B Chain B, Crystal Structure Of Tetrameric Form Of Human Lysyl-Trna
           Synthetase
 gi|167013427|pdb|3BJU|C Chain C, Crystal Structure Of Tetrameric Form Of Human Lysyl-Trna
           Synthetase
 gi|167013428|pdb|3BJU|D Chain D, Crystal Structure Of Tetrameric Form Of Human Lysyl-Trna
           Synthetase
          Length = 521

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 58  LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQ 117

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 118 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 166

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 167 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 225

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 226 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 283

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 284 EITEKMVSGMVKHITGSYKVT 304



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 468 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 503


>gi|319744806|gb|EFV97146.1| lysine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 533

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 21/254 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D+     ++G +   R  G + F  I+D  G  Q+    DS     +EI K       
Sbjct: 93  LHDIEETATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDSVGEENYEIFKKADLGDF 152

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 153 LGVEGQVMRTDM---------GELSIKATHITHLSKALR-PLPEKFHGLTDIETI-YRKR 201

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRV 186
            LDL   RD+  +  V R++II+ +R  M +  F+E  TP+L   +    AR F+     
Sbjct: 202 HLDLISNRDSFDR-FVTRSKIISEIRRFMDSNGFLEVETPVLHNEAGGASARPFITHHNA 260

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  ++   ++ + 
Sbjct: 261 -QDIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEAYQAYADY 318

Query: 247 DDILNTMENVLRGV 260
            DI++  E +++ V
Sbjct: 319 QDIMDLTEGIIQHV 332



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 468 LSRFEAQASAKELGDDEATGVDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 527

Query: 561 LFP 563
           LFP
Sbjct: 528 LFP 530


>gi|309799388|ref|ZP_07693629.1| asparaginyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308116986|gb|EFO54421.1| asparaginyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 447

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 112/296 (37%), Gaps = 44/296 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V +  WV      G I FL +RD     Q VA   +   +  + V  E    I  L
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 73

Query: 77  VMSRSAETINANIITGQI----------ELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               S        +TG +          EL    IE++  +++ P+     +E+      
Sbjct: 74  SQETSV------FVTGVVKEDERSKFGYELDITDIEVIGESQDYPIT---PKEHGTDFLM 124

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR       +  R  II +         F++  +PIL+ ++ E + +       
Sbjct: 125 DNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF----- 179

Query: 187 NQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S+
Sbjct: 180 -ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSY 238

Query: 244 VEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           +  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 239 LTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMEELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|78223563|ref|YP_385310.1| lysyl-tRNA synthetase, class-2 [Geobacter metallireducens GS-15]
 gi|78194818|gb|ABB32585.1| Lysyl-tRNA synthetase, class-2 [Geobacter metallireducens GS-15]
          Length = 491

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 13/244 (5%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G   F+ ++D  G  Q+    D+   E  ++  S  +  I G      A
Sbjct: 58  VAGRIIARRSFGKAAFVQLQDRKGRIQLYVRKDTLGDEAYEAFESFDIGDIIG------A 111

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
                   TG++ L+A ++ +L+ +  LPLP           R++ R++DL  +   + +
Sbjct: 112 TGTPFRTKTGELSLNASEVRLLTKSF-LPLPEKFHGLTDVETRYRQRYVDLIVNPEVREV 170

Query: 143 -VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQAPQ 199
            +KR+RI+N +R  M+  +F+E  TP++    P G  AR F+          + L  AP+
Sbjct: 171 FIKRSRIVNLIREFMVRHDFLEVETPMMQ-PIPGGATARPFVTHHNALDMELF-LRIAPE 228

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++   +D+++  E +L  
Sbjct: 229 LYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYQAYATFEDLMDFTEELLCH 287

Query: 260 VFEE 263
           V +E
Sbjct: 288 VTQE 291



 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 449 RALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFP 485


>gi|326422505|gb|EGD71901.1| tRNA synthetase class II (D K and N) [Candidatus Parvarchaeum
           acidophilus ARMAN-5_'5-way FS']
          Length = 476

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 121/250 (48%), Gaps = 25/250 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74
           G   +++G +   R HG I F+DI+D  G  Q+     + +    +IA+ +    ++ + 
Sbjct: 46  GKDEKIAGRIIAKRDHGTIKFIDIQDETGTIQIYFSNKHVNKESIKIAELLDVGDIIGVY 105

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGEREYPESIRFKYRFLD 132
           G V+            T +I + A+++ ILS +  LPLP   +G  +  +  RF+ R+LD
Sbjct: 106 GSVVKTK---------TDEISIDAKEVVILSKS-LLPLPPRWYGLEDTEK--RFRKRYLD 153

Query: 133 L--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQ 188
           L   R+++ K I K + +++ +R  +  + + E   PIL    P G  A+ F+       
Sbjct: 154 LIINRESMEK-IKKGSIMVSKIREILGKKGYTEVVVPILQP-IPGGANAKPFITHYNSLD 211

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FY L  A + Y + L+  GF++ F I+  FR+E   +   P EF  L+   ++ +   
Sbjct: 212 RDFY-LKIASELYLKRLLVGGFEKVFDISKNFRNEGIDTRHNP-EFMMLEAYQAYGDLSS 269

Query: 249 ILNTMENVLR 258
           +L   E +++
Sbjct: 270 MLELTEEIIK 279



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 27/43 (62%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A   GMPP GG+  GIDRI ML   +K+++EV  FP  + F D
Sbjct: 434 ALGYGMPPTGGVGIGIDRIQMLGTNSKSIKEVIPFPQLRTFED 476


>gi|330790777|ref|XP_003283472.1| hypothetical protein DICPUDRAFT_44848 [Dictyostelium purpureum]
 gi|325086582|gb|EGC39969.1| hypothetical protein DICPUDRAFT_44848 [Dictyostelium purpureum]
          Length = 649

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 24/280 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++ W+H VR    I+FL++RD  G  Q V   +     I + ++ E  + I G +
Sbjct: 225 GVRVEVNAWLHHVRNQKKIVFLELRDGTGFLQCVMGGNLVHPSIVEQLKREATVKIIGTL 284

Query: 78  MSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
               A         G +EL+A   E+L S + +L   +  E    + +  ++  L   R 
Sbjct: 285 SIPPA----GKTCPGGVELNADYWELLGSSSADLEGIINTESNVDQQLDQRHILL---RG 337

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           T   +I+K R+  + + R       + E + P L  +  EG  +          ++  L 
Sbjct: 338 TRASSIMKIRSIALQAFREHFYHNGYFEMNPPTLVNTFCEGGSELFTLDYFGTPAY--LT 395

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+ Q Y + +     D  F IA  +R E  R+ R   EF  L+ EM F+  +D+ + +E 
Sbjct: 396 QSSQLYLETMCPVVGD-VFCIAQSYRSEKARTRRHLSEFTHLEAEMPFITFEDLTDRIEF 454

Query: 256 VLRGVFEEFS--NGNTVSN----------NFLRICYDDAI 283
           ++  V E     +G+ V +           F+R+ Y +AI
Sbjct: 455 LICDVVERMLKIDGDLVRSIKEDVAVPKRPFMRMDYKEAI 494


>gi|307704413|ref|ZP_07641325.1| asparaginyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307622026|gb|EFO01051.1| asparaginyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 447

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 112/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
            +  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 HLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|85059967|ref|YP_455669.1| lysyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123766398|sp|Q2NRG1|SYK_SODGM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|84780487|dbj|BAE75264.1| lysyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 506

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 5/184 (2%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ +   +I +L+ A   PLP        +  R++ R+LDL  +   +   K R+RI+
Sbjct: 134 TGELSVHCSEIRLLTKAMR-PLPDKFHGLADQETRYRQRYLDLIANDESRQTFKVRSRIM 192

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R  M+  +F+E  TP++ T      AR F+          Y L  AP+ Y + L+  
Sbjct: 193 AEIRRFMMDNDFMEVETPMMQTIPGGAAARPFITHHNALGIDMY-LRIAPELYLKRLVVG 251

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GF+R F+I   FR+E   S R   EF  +++ M++ +  D++  +E + R + +     +
Sbjct: 252 GFERVFEINRNFRNEG-LSPRHNPEFTMMELYMAYADYRDLIVLVETLFRTLTQRVLGSS 310

Query: 269 TVSN 272
            V N
Sbjct: 311 VVHN 314



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++MLL  +  +R+V LFP
Sbjct: 465 ALEHGLPPTAGLGIGIDRLMMLLTNSHTIRDVILFP 500


>gi|315607440|ref|ZP_07882436.1| asparagine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250872|gb|EFU30865.1| asparagine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 466

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 131/331 (39%), Gaps = 63/331 (19%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSAC 58
           M   RT     L  +D G  + + GWV   R    + F+ + D   I   Q+V +P    
Sbjct: 1   MKMKRTKVVDALVSTDFGKDINVKGWVRSHRSSKAVDFIALNDGSTIKNIQIVVDPSLVD 60

Query: 59  FEIAKSVRSEWVLCIDG-LVMSRSAETINANIITGQI-ELSAQKIEILSVAE-ELPLPVF 115
            ++ KS+ +   L + G LV S+ A         GQ  E+  ++IE+  +   + P+   
Sbjct: 61  ADLLKSITTGACLSVVGTLVESQGA---------GQASEIQCKEIEVYGLCPGDYPMQKK 111

Query: 116 GER-EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
           G+  EY      KY  L LR +T       R  +  ++        F    TPI+TAS  
Sbjct: 112 GQSFEYMR----KYAHLRLRTNTFGAVFRIRHHMAMAIHRYFHEHGFFYFHTPIITASDC 167

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYF 214
           EGA +     +V   + Y L +  +                    Q +  L A+     +
Sbjct: 168 EGAGEMF---QVTTKNLYNLEKDEEGRIKYDDDFFGKTTSLTVSGQLEGELGATALGAIY 224

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EF 264
              P FR E+  + R   EF+ ++ E++F+EQ  +++  E+ ++   +          EF
Sbjct: 225 TFGPTFRAENSNTPRHLAEFWMIEPEVAFLEQQGLMDLEEDFIKYCVKWALDNCKDDLEF 284

Query: 265 SNG-----------NTVSNNFLRICYDDAIR 284
            N              +  +F+R+ Y + IR
Sbjct: 285 LNNMIDKSLIARLEGVLKEDFVRLTYTEGIR 315


>gi|270290652|ref|ZP_06196876.1| asparaginyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304386174|ref|ZP_07368507.1| asparagine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|270280712|gb|EFA26546.1| asparaginyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304327531|gb|EFL94758.1| asparagine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 463

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 114/283 (40%), Gaps = 28/283 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V ++GW+  +R    I FL+I D   I   QV+       +E  K       L + G V 
Sbjct: 21  VEVTGWLKTLRSSKKISFLEINDGSCIKNVQVIMENGLENYEEIKKAPIYTTLKVVGTV- 79

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                 ++        E+ A +IE+L  ++    P+  +   PE +R +   L  R +T 
Sbjct: 80  ------VDTPKAKQPFEIHATEIEVLGNSDS-DYPLQKKHHTPEFLR-EQAHLRPRTNTF 131

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----------- 187
           +     R+    ++   +   NF+  +TP++T+S  EGA +    + ++           
Sbjct: 132 YAVFRIRSLAAFAIHEFLQKNNFVYVNTPLITSSDTEGAGEMFKVTTLDLNNVPKNEEGK 191

Query: 188 ---QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 F+  P       QL     A  F   +   P FR ED  + R   EF+ ++ EM
Sbjct: 192 VDSTKDFFKQPTNLTVSGQLNAEAFALAFRDVYTFGPAFRAEDSHTTRHAAEFWMVEPEM 251

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           +F    D++N  E++L+ V        +   +FL    D  +R
Sbjct: 252 AFANLQDVINVSEDMLKYVINYLLENASDEIDFLNQNVDQELR 294


>gi|330752109|emb|CBL87070.1| Lysyl-tRNA synthetase [uncultured Flavobacteria bacterium]
          Length = 563

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 127/270 (47%), Gaps = 34/270 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---------VL 71
           V ++G +   R  G   F +++D  G  QV  N D  C    K++ +E          ++
Sbjct: 50  VIIAGRLMSRRIQGKASFAEVQDSQGRIQVYFNRDEICAGEDKTLYNEVYKKLLDIGDII 109

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP-------VFGEREYPES 123
            I+G + +            G+  +  +K ++L+ +   LPLP        F E   PE 
Sbjct: 110 GIEGTLFTTQV---------GEQTILVKKFDLLNKSLRPLPLPKTDSEGNTFDEFNDPE- 159

Query: 124 IRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDF 180
           +R++ R++DL  +  + +  +KRT+I NS+R    A++++E  TPIL    P G  AR F
Sbjct: 160 LRYRQRYVDLIVNPKVKETFIKRTKITNSIREYFNAKDYLEVETPIL-QPIPGGASARPF 218

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ 
Sbjct: 219 MTHHNALDIPLY-LRVANELYLKRLIVGGFDGVYEFSKDFRNEGMDRTHNP-EFTVMELY 276

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
           +++ +   ++ T E +L  V  + SNG++ 
Sbjct: 277 VAYKDYFWMMETTEALLEKVAVD-SNGSSA 305



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  GI  GIDR+VML+    +++EV  FP
Sbjct: 456 RALEYGMPPTSGIGIGIDRLVMLMTNNSSIQEVLFFP 492


>gi|326391795|ref|ZP_08213313.1| lysyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325992153|gb|EGD50627.1| lysyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 547

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 131/289 (45%), Gaps = 31/289 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74
           G  V L+G +   R HG   F DI+D  G  Q+    D+     +EI K +    ++ + 
Sbjct: 108 GKVVTLAGRIMSKRAHGKASFADIQDRDGRIQIYVKYDTVGEKNYEIFKILDIGDIIGVT 167

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           G V             TG+I +     ++LS + + LP    G ++ P+ +R++ R+ DL
Sbjct: 168 GEVFKSK---------TGEITIRVTDFKLLSKSLQILPEKWHGLKD-PD-LRYRQRYTDL 216

Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +   K + +KRT+II ++R  +    F+E  TPIL T +    AR F+          
Sbjct: 217 IINPEVKEVFLKRTKIIKAIREFLDNRGFLEVETPILHTIAGGAAARPFITHHNALDIDM 276

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G ++ +++   FR+E       P EF  L++  ++ +   ++ 
Sbjct: 277 Y-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNP-EFTLLELYEAYTDYYGMME 334

Query: 252 TMENVLRGVFEEFSNGNT----------VSNNFLRICYDDAIRRY-GTD 289
             E +   V ++  NG T          ++  + RI   DAI+ Y G D
Sbjct: 335 LTEQLFAYVAQKV-NGTTKIVYQGTEIDLTPPWKRITMVDAIKEYVGVD 382



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VM +  A ++R+V LFP
Sbjct: 505 ALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILFP 540


>gi|160881676|ref|YP_001560644.1| lysyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160430342|gb|ABX43905.1| lysyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 503

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 123/283 (43%), Gaps = 26/283 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCID 74
           G  V ++G +   R  G   F++I+D  G  Q     DS   E     +      ++ I 
Sbjct: 64  GQIVAIAGRIMTKRVMGKASFINIQDKLGNIQSYIQRDSIGEEEYAGFKKFDIGDIVGIK 123

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G V    A         G+I + A +I +LS   + LP    G  +     R++ R++DL
Sbjct: 124 GEVFKTHA---------GEISVRANEILLLSKCLQVLPEKFHGLTDT--DTRYRQRYVDL 172

Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +  + +  +KR+ II  +R  +  E+FIE  TP+L  ++   A    +    +     
Sbjct: 173 MMNPEVKETFIKRSAIIREIRNYLDGEDFIEVETPVLVKNAGGAAARPFMTHHNSLDEDL 232

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  + + Y + L+  G +R ++I   FR+E   S R   EF  L++  ++ + + +++ 
Sbjct: 233 NLRISLELYLKRLIVGGLERVYEIGRVFRNE-GLSVRHNPEFTLLELYQAYTDYNGMMDL 291

Query: 253 MENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286
            E + R V E+      +S           F RI   +A+++Y
Sbjct: 292 TEKLFRTVAEKVIGTTKISYEGVEIDLGKPFERITMVEAVKKY 334



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 27/41 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A   GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++ 
Sbjct: 461 ALAYGMPPTGGIGIGIDRLVMLLTDSSAIRDVLLFPTMKSL 501


>gi|149721122|ref|XP_001488269.1| PREDICTED: similar to Asparaginyl-tRNA synthetase [Equus caballus]
          Length = 559

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 114/289 (39%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 136 GRRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 182

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 183 VLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 242

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R  +    R       + E + P L  +  EG       +   
Sbjct: 243 NRHMMIRGENMSKILKARCIVTRCFRDHFFDRGYCEVTPPTLVQTQVEGGATLFKLNYFG 302

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  +
Sbjct: 303 EEAF--LTQSSQLYLETCIPALGD-VFCIAQSYRAEQSRTRRHLAEYSHVEAECPFLTFE 359

Query: 248 DILNTMENVLRGVFEEFSNGNTVS-------------NNFLRICYDDAI 283
           ++LN +E+++  V +        S               F R+ Y DAI
Sbjct: 360 ELLNRLEDLVCDVVDRVLKSPAASIVYDLNPNFKPPKRPFKRMNYSDAI 408


>gi|270157122|ref|ZP_06185779.1| lysyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289164473|ref|YP_003454611.1| lysyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269989147|gb|EEZ95401.1| lysyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288857646|emb|CBJ11486.1| putative lysyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 497

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 18/243 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V ++G +   R  G   F  I+D  G  Q+   AN     +E  K     W L   G ++
Sbjct: 64  VTVAGRIVLRRIMGKASFFHIQDFSGRIQIYIRANDLPEQYEQFKH----WDL---GDIV 116

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
               E    N  TG++ ++A+ IE+L+ +   PLP        + +R++ R++DL   D 
Sbjct: 117 GVEGELFKTN--TGELTVNAEGIELLTKSLR-PLPDKFHGLADQEMRYRKRYVDLIANDE 173

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALP 195
                + R+R+I ++R  M    F+E  TP++    P GA  R F+        + Y L 
Sbjct: 174 SRLTFLIRSRLIQALRQFMDKSFFLEVETPMM-HPIPGGALARPFVTHHHTLDMTMY-LR 231

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF+R ++I   FR+E   +   P EF  ++   ++ +  D++N  E 
Sbjct: 232 IAPELYLKRLVVGGFERVYEINRNFRNEGISTRHNP-EFTMVEFYQAYADYKDLMNFTEE 290

Query: 256 VLR 258
           ++R
Sbjct: 291 MIR 293



 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 14/92 (15%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---------YRAFQC 531
           +++    G EIA+G    + +E   + F      K+V E   G +           A + 
Sbjct: 407 RFEFFIAGREIANGFSELNDAEDQAERFR-----KQVAEKDAGDMEAMHFDSDYIEALEY 461

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP  G   GIDR+VML   ++++R+V LFP
Sbjct: 462 GLPPTAGEGIGIDRLVMLFTNSQSIRDVILFP 493


>gi|256370809|ref|YP_003108634.1| lysyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009601|gb|ACU52961.1| lysyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 497

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 122/251 (48%), Gaps = 15/251 (5%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-----FEIAKSVRSEWV 70
           + G  V +SG + R+R  G   F++I+D++G+ Q+    D        F + K +    +
Sbjct: 49  EYGKNVIISGRIIRMRKMGKASFIEIKDNHGLIQIYLKRDYEFKTKYDFFLKKLLDIGDI 108

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYR 129
           + I G +    +  I  + +   I+L ++ + +L +V ++    V    E  E  R++ R
Sbjct: 109 IGIKGFLFKTKSNKITVHAV--DIKLLSKCLRVLPNVKKDETGKVHDSFEESEQ-RYRMR 165

Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRV 186
           +LDL   D   K  +KRT+II  +R  +  + ++E  TP+L  S P G  AR F+     
Sbjct: 166 YLDLIVNDKTKKLFIKRTKIIQYIRNYLNNKGYLEVETPVL-QSIPGGAIARPFITHHNA 224

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  + + + + L+  G +  ++ +  FR+E    +  P EF  L++ +S+ + 
Sbjct: 225 LNIPLY-LRISNELFLKKLIVGGLESVYEFSRNFRNEGIDKNHNP-EFTILELYVSYKDY 282

Query: 247 DDILNTMENVL 257
             ++N +E +L
Sbjct: 283 FWMMNFIEKLL 293



 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           R+ + GMPP  GI  GIDR++MLL   K ++EV  FP
Sbjct: 456 RSLEFGMPPCAGIGIGIDRLIMLLTNNKCIQEVLFFP 492


>gi|323465812|gb|ADX69499.1| Lysyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 516

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 23/259 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      ++I K       L IDG V
Sbjct: 61  TKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIDGEV 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--R 134
           M            TG++ + A  +  LS A   LP    G ++  E+I ++ R+LDL   
Sbjct: 121 MKTD---------TGELTIRATHVTFLSKALRPLPDKYHGLKDV-EAI-YRQRYLDLITN 169

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
           RD+ +   V RT+II ++R  +  +NF+E  TP+L  + P G  AR F+          Y
Sbjct: 170 RDS-YMRFVHRTQIIQAIRDYLNKQNFLEVETPVL-HNIPGGAEARPFITHHNALDIDLY 227

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                    K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++ 
Sbjct: 228 MRIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDFHDVMDE 285

Query: 253 MENVLRGVFEEFSNGNTVS 271
            E ++R   +  S+   ++
Sbjct: 286 AEGIIRAAAKVVSDDGKIT 304



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 454 RAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 490


>gi|197301309|ref|ZP_03166394.1| hypothetical protein RUMLAC_00040 [Ruminococcus lactaris ATCC
           29176]
 gi|197299627|gb|EDY34142.1| hypothetical protein RUMLAC_00040 [Ruminococcus lactaris ATCC
           29176]
          Length = 693

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 133/285 (46%), Gaps = 34/285 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +I+D  G  QV    D+   +     +   +  I GL    
Sbjct: 105 VAIAGRMMFKRVMGKASFCNIQDLQGNIQVYVARDAIGTDSYADFKKSDIGDIFGL---- 160

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
             E       TG+I + A+K+ +LS + + LP    G  +     R++ R++DL  ++  
Sbjct: 161 --EGFAFRTRTGEISIHAEKMTLLSKSLQMLPEKFHGLTDT--DTRYRQRYVDLIMNSDT 216

Query: 140 KNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ-- 196
           K+  +KR++I++++R  +  + F+E  TP+L A++   A      +R  +  F AL +  
Sbjct: 217 KDTFIKRSKILSAIRKYLSGKGFMEVETPMLVANAGGAA------ARPFETHFNALNEDL 270

Query: 197 ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
               + + Y + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +   +++ 
Sbjct: 271 KLRISLELYLKRLIVGGLEKVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYHGMMDL 329

Query: 253 MENVLRGVFEEFSNGNT----------VSNNFLRICYDDAIRRYG 287
            EN+ R V +E   G T          +   F RI   DA+++Y 
Sbjct: 330 TENLYRFVAQEVL-GTTHIVYKGIEMDLGKPFERITMVDAVKKYA 373



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+ MLL GA+ +R+V LFP
Sbjct: 499 ALEIGMPPTGGIGFGIDRMCMLLTGAEAIRDVLLFP 534


>gi|167039464|ref|YP_001662449.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300915430|ref|ZP_07132743.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307725210|ref|YP_003904961.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|238687610|sp|B0K5C0|SYK_THEPX RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166853704|gb|ABY92113.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300888490|gb|EFK83639.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307582271|gb|ADN55670.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 499

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 127/285 (44%), Gaps = 30/285 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74
           G  V L+G +   R HG   F DI+D  G  Q+    D+     +EI K +    ++ + 
Sbjct: 60  GKVVTLAGRIMSKRAHGKASFADIQDRDGRIQIYVKYDTVGEKNYEIFKILDIGDIIGVT 119

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           G V             TG+I +     ++LS + + LP    G ++    +R++ R+ DL
Sbjct: 120 GEVFKSK---------TGEITIRVTDFKLLSKSLQILPEKWHGLKD--PDLRYRQRYTDL 168

Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +   K + +KRT+II ++R  +    F+E  TPIL T +    AR F+          
Sbjct: 169 IINPEVKEVFLKRTKIIKAIREFLDNRGFLEVETPILHTIAGGAAARPFITHHNALDIDM 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G ++ +++   FR+E       P EF  L++  ++ +   ++ 
Sbjct: 229 Y-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNP-EFTLLELYEAYTDYYGMME 286

Query: 252 TMENVLRGVFEEFSNGNT----------VSNNFLRICYDDAIRRY 286
             E +   V ++  NG T          ++  + RI   DAI+ Y
Sbjct: 287 LTEQLFAYVAQKV-NGTTKIVYQGTEIDLTPPWKRITMVDAIKEY 330



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VM +  A ++R+V LFP
Sbjct: 457 ALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILFP 492


>gi|169806644|ref|XP_001828066.1| lysyl-tRNA synthetase, mitochondrial [Enterocytozoon bieneusi H348]
 gi|263511619|sp|A9CS74|SYKC_ENTBH RecName: Full=Probable lysyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|161779194|gb|EDQ31218.1| lysyl-tRNA synthetase, mitochondrial [Enterocytozoon bieneusi H348]
          Length = 518

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 111/252 (44%), Gaps = 28/252 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD------SACFEIAKSVRSEWVLCID 74
           V L G V R R H    F D++      Q+V N +          +I   +R   ++   
Sbjct: 64  VELVGRVIRARIHSMTNFYDVKKDNDELQIVYNKNLQGKENPIAIKIVDCIRRGDIIGFK 123

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY----PESIRFKYRF 130
           G+V             TG+I + A +I+ILS      L  F   +     PE I +++R 
Sbjct: 124 GIV---------GRTKTGEISVFAHEIQILSPC----LRAFPSEKNLITNPELI-YRHRH 169

Query: 131 LDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQ 188
           +DL  +   +N  + R++II  +R       F+E  TPI+        AR FL      +
Sbjct: 170 IDLLVNQDSRNRFITRSKIIQHIREYFNKIGFLEVETPIMNNKVGGASARPFLTHHNELK 229

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  AP+ + + L+  G +R F+I   FR+E       P EF  ++  M++ + +D
Sbjct: 230 IDLY-LRVAPELFLKQLVVGGLERVFEIGKNFRNEGIDLTHNP-EFTAIEFYMAYADYND 287

Query: 249 ILNTMENVLRGV 260
           ++  +E +L G+
Sbjct: 288 LMCIVEELLSGL 299



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEV------MLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           ++++ CNG E+ +     ++ ++      M  A +N G  + +  +      +  + G+P
Sbjct: 425 RFEMFCNGKELVNAYTELNIPDLQRKRFLMQDADANAGDDEAMPNDE--DFCQVLEYGLP 482

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG   GIDR+VM L  A N+R+V LFP
Sbjct: 483 PTGGCGIGIDRLVMYLTDAANIRDVILFP 511


>gi|90413185|ref|ZP_01221181.1| lysyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90325876|gb|EAS42328.1| lysyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 502

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 140/301 (46%), Gaps = 43/301 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + + G  V ++G V   R      FL I+D  G  Q  A+         K+V+ E     
Sbjct: 56  LEEEGHIVAIAGRVMAKRGP----FLAIQDVSGRIQAYAD---------KTVQKELKEKY 102

Query: 74  DGLVMSRSAETINANIITGQIELSAQ--------KIEILSVAEELPLPVFGEREYPESIR 125
            GL +    + I    + GQ+ LS +          E+L+ A   PLP        + +R
Sbjct: 103 SGLDI---GDIIG---VKGQLHLSGKGDLYVTMDNYELLTKALR-PLPEKFHGLTDQEMR 155

Query: 126 FKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLV 182
           ++ R++DL  +   +N ++ R+++++++R  M  ++F+E  TP++    P GA  R F+ 
Sbjct: 156 YRQRYVDLIVNEDSRNTMIMRSKVVSAIRNFMTKKDFMEVETPMMHVI-PGGATARPFIT 214

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++  M+
Sbjct: 215 HHNALDIDMY-LRVAPELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMA 272

Query: 243 FVEQDDILNTMENVLRGVFEEFSN------GNTVSN---NFLRICYDDAIRRYGTDKPDL 293
           + + +D+++  E +L  +  +         G+ + +    + RI   +AI++Y  D  ++
Sbjct: 273 YADYNDLMDLTEEMLSSIATDLHGSPKLPYGDAIVDFGGPYPRISMLNAIKQYNPDNAEI 332

Query: 294 R 294
           +
Sbjct: 333 Q 333



 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|34849431|gb|AAP58930.1| asparagine/asparaginyl-tRNA synthetase [Spiroplasma kunkelii
           CR2-3x]
          Length = 455

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 118/279 (42%), Gaps = 27/279 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDS-ACFEIAKSVR-SEWVLCID 74
           S V + GWV   R  G + FL + D   +   Q+V   +  A F    S+R S  +  + 
Sbjct: 16  SEVTILGWVRSNRSSGKLGFLVMNDGTFFNNVQIVYKAEKLANFLAISSLRISSAIKVVG 75

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
              ++ SA+           E+ A  IEIL   +E+ PL     ++   S  +      L
Sbjct: 76  KFCVTPSAKQ--------TFEIQASVIEILDDASEDYPL-----QKKEHSYEYLREIPHL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGA-RDFLVPSRV--NQ 188
           R  T   N V R R  +S          NFI   TPI+T +  EGA   F+V +R   N 
Sbjct: 123 RAKTNTFNAVFRIRSSSSFAIHEFFNKNNFIYVHTPIITGNDAEGAGESFIVTTRTDNNY 182

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQ----IAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              +   +A       L A GF + F+      P FR E+  + R   EF+ ++ E+SF+
Sbjct: 183 NEDFFGKKASLTVSGQLHAEGFAQAFRNVYTFGPTFRAENSNTTRHAAEFWMIEPEISFI 242

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
           + ++ +  +E +++ +       N    +FL    DD +
Sbjct: 243 DLEENMTLIEKMIKHIIIYLFINNHYELDFLNNNVDDKL 281


>gi|116749903|ref|YP_846590.1| asparaginyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|226695302|sp|A0LL53|SYN_SYNFM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116698967|gb|ABK18155.1| asparaginyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 466

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 115/272 (42%), Gaps = 33/272 (12%)

Query: 11  DLGVSD---VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGI--TQVVANPDSACF-EIAK 63
           DL  SD   +G  VR  GWV   R    G+ F+++ D   +   QVVA+     + ++ +
Sbjct: 9   DLFTSDQEYIGKTVRAQGWVRTKRDSKAGVSFIELNDGSCLRNLQVVADQGHPEYRQLLE 68

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPE 122
           S+ +   + ++G +     +        GQ IEL A +I +   A+    P+  +R   E
Sbjct: 69  SITTGCAVMVEGSIAYSPGK--------GQTIELKADRITLYGTADPAVYPLQKKRHSFE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL- 181
            +R +   L  R +T+      R R+  ++        F    TPI+TAS  EGA +   
Sbjct: 121 FLR-QIGHLRPRTNTIGAVSRVRNRLSYAIHQFFQDRGFYYIHTPIITASDCEGAGEMFR 179

Query: 182 ------------VPSRVNQGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
                       VP  V +  F+  P       Q +  + A    R +   P FR E+  
Sbjct: 180 VTTLDAQNAPAKVPEEVYRADFFGKPAFLTVSGQLQAEIYALALGRVYTFGPTFRAENSN 239

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + R   EF+ ++ EM+F + +  L   + ++R
Sbjct: 240 TSRHLAEFWMVEPEMAFCDLEGDLEIAQALIR 271


>gi|58271550|ref|XP_572931.1| lysine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21]
 gi|134115106|ref|XP_773851.1| hypothetical protein CNBH3030 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256479|gb|EAL19204.1| hypothetical protein CNBH3030 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229190|gb|AAW45624.1| lysine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 630

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 117/258 (45%), Gaps = 19/258 (7%)

Query: 21  VRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSAC-----FEIAKSVRSEWVLCID 74
           + L+G V+ +R     + F D++      Q++A   +A       +    +R   ++ + 
Sbjct: 156 ISLAGRVYTIRESSSKLRFYDLKADGVKVQIMAQAQNAASLEEYLDTHDRIRRGDIIGVT 215

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G         I +    G++ LS   I++LS    L LP   E       R++ R+LDL 
Sbjct: 216 G---------IPSRTKMGELSLSISSIQLLSPCLHL-LP-GREGVVDLETRYRKRYLDLI 264

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +   ++I V R+++IN +R  + A+ F+E  TP+++  +        V    +      
Sbjct: 265 MNPSTRDIFVTRSKVINYIRKYLDAQGFLEVETPMMSMIAGGATAKPFVTHHNDLKLDLF 324

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  AP+ Y + L+  G DR F+I   FR+E       P EF   +  M++ +  DI++  
Sbjct: 325 MRIAPELYLKELVVGGLDRVFEIGRVFRNEQIDMTHNP-EFSICEFYMAYADMYDIMDMT 383

Query: 254 ENVLRGVFEEFSNGNTVS 271
           E ++ G+ +  + G  ++
Sbjct: 384 EELIEGMVKSLTGGTKLT 401



 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+VM L    N++EV LFP
Sbjct: 567 ALEYGLPPTGGWGLGIDRLVMFLTDCSNIKEVLLFP 602


>gi|256751868|ref|ZP_05492740.1| lysyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749275|gb|EEU62307.1| lysyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 499

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 127/285 (44%), Gaps = 30/285 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74
           G  V L+G +   R HG   F DI+D  G  Q+    D+     +EI K +    ++ + 
Sbjct: 60  GKVVTLAGRIMSKRSHGKASFADIQDRDGRIQIYVKYDTVGEKNYEIFKILDIGDIIGVT 119

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           G V             TG+I +     ++LS + + LP    G ++    +R++ R+ DL
Sbjct: 120 GEVFKSK---------TGEITIRVTDFKLLSKSLQILPEKWHGLKD--PDLRYRQRYTDL 168

Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +   K + +KRT+II ++R  +    F+E  TPIL T +    AR F+          
Sbjct: 169 IINPEVKEVFLKRTKIIKAIREFLDNRGFLEVETPILHTIAGGAAARPFITHHNALDIDM 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G ++ +++   FR+E       P EF  L++  ++ +   ++ 
Sbjct: 229 Y-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNP-EFTLLELYEAYTDYYGMME 286

Query: 252 TMENVLRGVFEEFSNGNT----------VSNNFLRICYDDAIRRY 286
             E +   V ++  NG T          ++  + RI   DAI+ Y
Sbjct: 287 LTEQLFAYVAQKV-NGTTKIVYQGTEIDLTPPWKRITMVDAIKEY 330



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VM +  A ++R+V LFP
Sbjct: 457 ALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILFP 492


>gi|229163550|ref|ZP_04291500.1| Asparaginyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619932|gb|EEK76808.1| Asparaginyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 463

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 128/327 (39%), Gaps = 61/327 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V   
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSSVKVE 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             ++ +  A+           E+ A+KI+I  +++    P+  +R   E +R       L
Sbjct: 77  GKVIATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T   +   R R I +       +   F+   TPI+T S  EGA +     RV     
Sbjct: 125 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 181

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             +P+                       Q      A  F   +   P FR E+  + R  
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270
            EF+ ++ E++F E  D+++  E++L+   +          EF N            N +
Sbjct: 242 AEFWMVEPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVI 301

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F RI Y +AI+       D + P+
Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328


>gi|194890440|ref|XP_001977309.1| GG18967 [Drosophila erecta]
 gi|190648958|gb|EDV46236.1| GG18967 [Drosophila erecta]
          Length = 574

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 20/248 (8%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           + ++G VH +R  G  +IF D+R      QV+A+        AKS +SE     D   + 
Sbjct: 109 LSVAGRVHAIRESGAKLIFYDLRGEGVKVQVMAS--------AKSYKSEADFVTDTAKLR 160

Query: 80  RSAETIN-----ANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           R  + I           G++ +   +I++LS     LP   FG ++  +  R++ R+LDL
Sbjct: 161 R-GDIIGVVGQPGKTKKGELSVMPSEIKLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 217

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
              + + +N   R +II+ +R  +    F+E  TP++   +        V    +     
Sbjct: 218 ILNNKVRENFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNDLKMDL 277

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  DI++ 
Sbjct: 278 FMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYADIMDI 336

Query: 253 MENVLRGV 260
            E ++ G+
Sbjct: 337 TEQLVSGM 344



 Score = 44.3 bits (103), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 519 SLEYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFP 554


>gi|290559649|gb|EFD92977.1| tRNA synthetase class II (D K and N) [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 476

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 121/250 (48%), Gaps = 25/250 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74
           G   +++G +   R HG I F+DI+D  G  Q+     + +    +IA+ +    ++ + 
Sbjct: 46  GKDEKIAGRIIAKRDHGTIKFIDIQDETGTIQIYFSNKHVNKESIKIAELLDVGDIIGVY 105

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGEREYPESIRFKYRFLD 132
           G V+            T +I + A+++ ILS +  LPLP   +G  +  +  RF+ R+LD
Sbjct: 106 GSVVKTK---------TDEISIDAKEVVILSKS-LLPLPPRWYGLEDTEK--RFRKRYLD 153

Query: 133 L--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQ 188
           L   R+++ K I K + +++ +R  +  + + E   PIL    P G  A+ F+       
Sbjct: 154 LIINRESMEK-IKKGSIMVSKIREILGKKGYTEVVVPILQP-IPGGANAKPFITHYNSLD 211

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FY L  A + Y + L+  GF++ F I+  FR+E   +   P EF  L+   ++ +   
Sbjct: 212 RDFY-LKIASELYLKRLLVGGFEKVFDISKNFRNEGIDTRHNP-EFMMLEAYQAYGDLSS 269

Query: 249 ILNTMENVLR 258
           +L   E +++
Sbjct: 270 MLELTEEIIK 279



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 27/43 (62%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A   GMPP GG+  GIDRI ML   +K+++EV  FP  + F D
Sbjct: 434 ALGYGMPPTGGVGIGIDRIQMLGTNSKSIKEVIPFPQLRTFED 476


>gi|156555390|ref|XP_001605382.1| PREDICTED: similar to ENSANGP00000013871 [Nasonia vitripennis]
          Length = 468

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 113/283 (39%), Gaps = 39/283 (13%)

Query: 3   RYRTHSCGDLGVSD----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDS 56
           R R H+   +  S+    VG   ++ GWV  +R     IFLD+ D       QVV     
Sbjct: 18  RRRAHNYATIYESNDSKNVGKKAKVQGWVKALRKMKDNIFLDLNDGTSSQPLQVV----- 72

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAE-TINANIITGQIELSAQKIEILSVAEELPLPVF 115
               + K ++ E +    G  M+   E T+  N   G+ EL   KI+I+   +    P  
Sbjct: 73  ----LKKGMKPENLSY--GCSMTVEGEITVAPN---GRAELQVDKIDIIGKCDLEGYPFL 123

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
             ++Y E    +Y  L  R       +  R    N++R       FI   TPILT++  E
Sbjct: 124 PRKQYSEDYIRRYLHLRPRTKAFSSTMRLRDLATNAIRDHFRDRGFINIHTPILTSNDCE 183

Query: 176 GARDFLVPSRVNQGSFYALP----QAPQQY---KQLLMASG----------FDRYFQIAP 218
           GA +  +    +Q    A+          Y   K  L  SG            + +  +P
Sbjct: 184 GAGEVFIIQPNSQELVQAMKTEGVDVESTYFNSKAFLTVSGQLHLEACARALSKVYNFSP 243

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGV 260
            FR E+ +S     EFY ++ EM+F+    D+    E +++ V
Sbjct: 244 AFRAENTKSRLHLSEFYMIEAEMAFIASLKDLATEAELLVKSV 286


>gi|54307775|ref|YP_128795.1| lysyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81400152|sp|Q6LUN2|SYK_PHOPR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|46912198|emb|CAG18993.1| putative lysyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 502

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 140/301 (46%), Gaps = 43/301 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + + G  V ++G V   R      FL I+D  G  Q  A+         K+V+ E     
Sbjct: 56  LEEEGHIVAIAGRVMAKRGP----FLAIQDVSGRIQAYAD---------KTVQKELKEKY 102

Query: 74  DGLVMSRSAETINANIITGQIELSAQ--------KIEILSVAEELPLPVFGEREYPESIR 125
            GL +    + I    + GQ+ LS +          E+L+ A   PLP        +  R
Sbjct: 103 SGLDI---GDIIG---VKGQLHLSGKGDLYVTMDNYELLTKALR-PLPEKFHGLTDQETR 155

Query: 126 FKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLV 182
           ++ R++DL  +   +N ++ R+++++++R  M+ ++F+E  TP++    P GA  R F+ 
Sbjct: 156 YRQRYVDLIVNEDSRNTMIMRSKVVSAIRNFMMKKDFMEVETPMMHVI-PGGATARPFIT 214

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++  M+
Sbjct: 215 HHNALDIDMY-LRVAPELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMA 272

Query: 243 FVEQDDILNTMENVLRGVFEEFSN------GNTVSN---NFLRICYDDAIRRYGTDKPDL 293
           + + +D+++  E +L  +  +         G+ + +    + RI   +AI++Y  D  ++
Sbjct: 273 YADYNDLMDLTEEMLSSIATDLHGSPKLPYGDAIVDFGGPYPRISMLNAIKQYNPDNAEI 332

Query: 294 R 294
           +
Sbjct: 333 Q 333



 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|296414834|ref|XP_002837102.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295632952|emb|CAZ81293.1| unnamed protein product [Tuber melanosporum]
          Length = 500

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 4/145 (2%)

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLV 182
           R + R +DL    +   I++ R+ II  +R   I+ +F+E  TPIL+ +     A+ FL 
Sbjct: 132 RLRNRHVDLMVRPVAGQILRLRSHIIQHIRDFFISRDFVEVQTPILSDTFGGAVAKPFLT 191

Query: 183 -PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
             + V +G   AL  AP+ + + L+  G DR F+I   FR+E   +   P EF   +   
Sbjct: 192 EATSVCRGKQLALRIAPELWLKRLVIGGLDRVFEIGTQFRNEGVDNTHNP-EFTTCEFYQ 250

Query: 242 SFVEQDDILNTMENVLRGVFEEFSN 266
           ++   +DI+NT E +L G+  + S 
Sbjct: 251 AYAGLEDIINTTEELLSGMARKVSE 275



 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +A + G+PP GG   GIDR+VM+  GA+ + +V  F
Sbjct: 444 QALEWGLPPTGGWGIGIDRLVMVFAGAERIADVLAF 479


>gi|242037499|ref|XP_002466144.1| hypothetical protein SORBIDRAFT_01g002140 [Sorghum bicolor]
 gi|241919998|gb|EER93142.1| hypothetical protein SORBIDRAFT_01g002140 [Sorghum bicolor]
          Length = 580

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/326 (21%), Positives = 144/326 (44%), Gaps = 34/326 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           C D+ VS  G  V         R  G ++F+ +RD  G  Q+    DS   +  + +++ 
Sbjct: 112 CEDVSVSVAGRIVAR-------RAFGKLVFMTVRDDSGTMQLYCEKDSLTEDQFEQLKA- 163

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
           ++   D L  S S +        G++ +  +  EIL+ +  LPLP           R++ 
Sbjct: 164 FIDIGDILGASGSIKKTEK----GELSVYVKNFEILTKS-LLPLPDKYHGLTDVDKRYRQ 218

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRV 186
           R++D+  +    ++ + R ++++ +R  M +  FIE  TP+L  A+    AR F+     
Sbjct: 219 RYVDMIANPKVADVFRTRAKVVSEIRKTMESFGFIEVETPVLQGAAGGAEARPFITYHNS 278

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            Q   Y L  A + + + ++  G ++ ++I   FR+E   +   P EF  ++M  ++ + 
Sbjct: 279 LQRDLY-LRIATELHLKRMLVGGLEKVYEIGRIFRNEGISTRHNP-EFTTIEMYEAYSDY 336

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           + ++N  E ++       +     ++  L++ Y+        ++P  R    MH++ +  
Sbjct: 337 ESMMNMAEEIV-------TRCAMATHGKLKVDYEGT--EISLERPWRRE--TMHSLVKEA 385

Query: 307 VHSEFRVFSKILSVN------PGYEV 326
              +F  F  + S        PG+EV
Sbjct: 386 TGIDFNSFGDVESAKRAVKGLPGFEV 411



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + + GMPP  G+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 539 SLEYGMPPASGMGLGIDRLVMLLTNSSSIRDVIAFPV 575


>gi|71027527|ref|XP_763407.1| lysyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68350360|gb|EAN31124.1| lysyl-tRNA synthetase, putative [Theileria parva]
          Length = 551

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 93/179 (51%), Gaps = 13/179 (7%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIIN 150
           G++ +  + ++ILS    +    FG ++    +RF+ R+LDL  +     ++K R+RII+
Sbjct: 166 GELSVFPKSVQILSPCLHMLPDKFGLKD--NDVRFRQRYLDLMMNDDSLKVMKLRSRIID 223

Query: 151 SMRCRMIAENFIECSTPIL-TASSPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLLMAS 208
            +R  + +  F E  TP+L T S+   A+ F+   + ++   F  +  AP+   +L++  
Sbjct: 224 YLRKFLTSRGFFEVETPMLKTTSTGASAKPFITHHNELDLDLFMRI--APELPLKLIIIG 281

Query: 209 GFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG-VFEEF 264
           GF++ F+I  CFR+E  DP  +    EF   +   ++ +  D++   E  L   VFE F
Sbjct: 282 GFEKVFEIGKCFRNEGIDPTHN---PEFTSCEFYWAYADYHDLMKLTEEFLSSLVFELF 337



 Score = 40.8 bits (94), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 23/43 (53%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + G+PP  G   GIDR+ M L    N++EV  FP  +   D
Sbjct: 505 ALEYGLPPTAGWGIGIDRLTMFLADKNNIKEVIFFPTMRPLND 547


>gi|297545388|ref|YP_003677690.1| lysyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843163|gb|ADH61679.1| lysyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 499

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 30/285 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74
           G  V L+G +   R HG   F DI+D  G  Q+    D+     +EI K      +L I 
Sbjct: 60  GKVVTLAGRIMSKRTHGKASFADIQDREGRIQIYVKYDTVGEKNYEIFK------ILDI- 112

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           G ++  + E   +   TG+I +     ++LS + + LP    G ++    +R++ R+ DL
Sbjct: 113 GDIIGFTGEVFKSK--TGEITIRVTDFKLLSKSLQILPEKWHGLKD--PDLRYRQRYTDL 168

Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +   K + +KRT+II ++R  +    F+E  TPIL T +    AR F+          
Sbjct: 169 IINPEVKEVFLKRTKIIKAIREFLDDRGFLEVETPILHTIAGGAAARPFITHHNALDIDM 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G ++ +++   FR+E       P EF  L++  ++ +   ++ 
Sbjct: 229 Y-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDVRHNP-EFTLLELYEAYTDYYGMME 286

Query: 252 TMENVLRGVFEEFSNGNT----------VSNNFLRICYDDAIRRY 286
             E +   V ++  NG T          ++  + RI   DAI+ Y
Sbjct: 287 LTEQLFAYVAQKV-NGTTKIVYQGTEIDLTPPWKRITMVDAIKEY 330



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VM +  A ++R+V LFP
Sbjct: 457 ALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILFP 492


>gi|300864096|ref|ZP_07108995.1| asparaginyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300337912|emb|CBN54141.1| asparaginyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 463

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 123/306 (40%), Gaps = 51/306 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLV 77
           V + GWV   R      F+++ D   +   QVV N +   +E I K + +   + + G++
Sbjct: 19  VTVQGWVRTKRELKEFTFVEVNDGSAMANLQVVINLNLPNYEHIVKQLNTGASVEVTGVL 78

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++  A+        GQ IEL A  + +   A+    P+  +R   E +R     L  R +
Sbjct: 79  VASPAK--------GQRIELKASAVTVYGDADPQTYPLQKKRHSFEFLR-TIAHLRSRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--------- 187
           T       R    +++        F+   TPI+TAS  EGA +    +  +         
Sbjct: 130 TYSAVFRVRNACAHAVHQFFQERGFLWVHTPIITASDCEGAGEMFSVTNFDLKNIPRNDR 189

Query: 188 -----QGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+  P       Q +  +MA  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 190 EQIDFTKDFFGKPAYLTVSGQLEAEVMAMAFGNVYTFGPTFRAENSNTSRHLAEFWMIEP 249

Query: 240 EMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRIC 278
           EM+F + +  ++  E  L+ +F+          EF N            N ++N F RI 
Sbjct: 250 EMAFCDLEGDMDLAEAFLKHIFKYVLETCQEDIEFFNERIDKTVLATAENIINNQFERIT 309

Query: 279 YDDAIR 284
           Y +A+R
Sbjct: 310 YTEAVR 315


>gi|161506863|ref|YP_001576817.1| lysyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|160347852|gb|ABX26526.1| Lysyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 511

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 23/259 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      ++I K       L IDG V
Sbjct: 56  TKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIDGEV 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--R 134
           M            TG++ + A  +  LS A   LP    G ++  E+I ++ R+LDL   
Sbjct: 116 MKTD---------TGELTIRATHVTFLSKALRPLPDKYHGLKDV-EAI-YRQRYLDLITN 164

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
           RD+ +   V RT+II ++R  +  +NF+E  TP+L  + P G  AR F+          Y
Sbjct: 165 RDS-YMRFVHRTQIIQAIRDYLNKQNFLEVETPVL-HNIPGGAEARPFITHHNALDIELY 222

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                    K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++ 
Sbjct: 223 MRIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDFHDVMDE 280

Query: 253 MENVLRGVFEEFSNGNTVS 271
            E ++R   +  S+   ++
Sbjct: 281 AEGIIRAAAKVVSDDGKIT 299



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 449 RAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 485


>gi|301769781|ref|XP_002920308.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like
           [Ailuropoda melanoleuca]
          Length = 559

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 114/289 (39%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 136 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 182

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V++  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 183 VLATESSVAVYGMLNLTPEGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 242

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ +    R       + E + P L  +  EG           
Sbjct: 243 NRHMMIRGENMSKILKARSVVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 302

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  +
Sbjct: 303 EEAF--LTQSSQLYLETCIPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFE 359

Query: 248 DILNTMENVLRGVFEEFSNGNTVS-------------NNFLRICYDDAI 283
           ++LN +E+++  V +        S               F R+ Y DAI
Sbjct: 360 ELLNRLEDLVCDVVDRVLKSPAASIVRDLNPNFKPPKRPFKRMNYSDAI 408


>gi|297580790|ref|ZP_06942716.1| lysyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297535206|gb|EFH74041.1| lysyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 512

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 20/209 (9%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150
           G + ++ ++ ++L+ A   PLP        + +R++ R++DL  +   +N  + R+++++
Sbjct: 135 GDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMS 193

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y +  AP+ Y + L+  
Sbjct: 194 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-VRIAPELYLKRLVVG 251

Query: 209 GFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           GFDR F+I   FR+E   PR +    EF  ++  M++ +  D+++  E +L  V  E   
Sbjct: 252 GFDRVFEINRNFRNEVLSPRHN---PEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLG 308

Query: 267 GNTV---------SNNFLRICYDDAIRRY 286
             ++            + R+   DAI+ Y
Sbjct: 309 STSMPYGEHTVEFGGKYARMSMFDAIKHY 337



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 471 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 506


>gi|288924577|ref|ZP_06418514.1| asparagine--tRNA ligase [Prevotella buccae D17]
 gi|288338364|gb|EFC76713.1| asparagine--tRNA ligase [Prevotella buccae D17]
          Length = 466

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 131/331 (39%), Gaps = 63/331 (19%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSAC 58
           M   RT     L  +D G  + + GWV   R    + F+ + D   I   Q+V +P    
Sbjct: 1   MKMKRTKVVDALVSTDFGKDINVKGWVRSHRSSKAVDFIALNDGSTIKNIQIVVDPSLVD 60

Query: 59  FEIAKSVRSEWVLCIDG-LVMSRSAETINANIITGQI-ELSAQKIEILSVAE-ELPLPVF 115
            ++ KS+ +   L + G LV S+ A         GQ  E+  ++IE+  +   + P+   
Sbjct: 61  ADLLKSITTGACLSVVGTLVESQGA---------GQASEIQCKEIEVYGLCPGDYPMQKK 111

Query: 116 GER-EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
           G+  EY      KY  L LR +T       R  +  ++        F    TPI+TAS  
Sbjct: 112 GQSFEYMR----KYAHLRLRTNTFGAVFRIRHHMAMAIHRYFHEHGFFYFHTPIITASDC 167

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYF 214
           EGA +     +V   + Y L +  +                    Q +  L A+     +
Sbjct: 168 EGAGEMF---QVTTKNLYNLEKDEEGRIKYDDDFFGKTTSLTVSGQLEGELGATALGAIY 224

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EF 264
              P FR E+  + R   EF+ ++ E++F+EQ  +++  E+ ++   +          EF
Sbjct: 225 TFGPTFRAENSNTPRHLAEFWMIEPEVAFLEQQGLMDLEEDFIKYCVKWALDNCKDDLEF 284

Query: 265 SNG-----------NTVSNNFLRICYDDAIR 284
            N              +  +F+R+ Y + IR
Sbjct: 285 LNKMIDKSLIARLEGVLKEDFVRLTYTEGIR 315


>gi|251790992|ref|YP_003005713.1| lysyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247539613|gb|ACT08234.1| lysyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 505

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 129/282 (45%), Gaps = 21/282 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G 
Sbjct: 64  LGLEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GD 120

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +
Sbjct: 121 ILGARGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
              ++  + R++I+  +R  M+  +F+E  TP++    P GA  R F+          Y 
Sbjct: 178 DESRHTFRVRSQILAGIRQFMVGRDFMEVETPMMQVI-PGGASARPFITHHNALDIDMY- 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   
Sbjct: 236 LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIELT 294

Query: 254 ENVLRGVFE------EFSNGNTV---SNNFLRICYDDAIRRY 286
           E++ R + +      E   G+ V      F ++   +AI++Y
Sbjct: 295 ESLFRTLAQNVLGTTEVPYGDQVFDFGKPFEKLTMREAIKKY 336



 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F +   +K+  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|126305059|ref|XP_001378881.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 651

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           +R++G VH  R  G  ++F DIR      QV A       +   F I   +R   ++ + 
Sbjct: 180 LRVAGRVHAKRSAGKKLVFYDIRGEGSKLQVKATSKNYKSEEEFFHINNKLRRGDIIGVQ 239

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 240 G---------NPGRTKRGELSIIPHEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 288

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 289 ILNDFVRQKFITRSKIITYIRSFLDELGFLEVETPMMNFI-PGGAVAKPFITYHNELDMN 347

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 348 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 405

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    VS
Sbjct: 406 EITEKMISGMVKNITGSYKVS 426



 Score = 43.9 bits (102), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ MLL  + N++EV LFP
Sbjct: 590 ALEYGLPPTAGWGMGIDRLTMLLTDSSNIKEVLLFP 625


>gi|320169209|gb|EFW46108.1| lysyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 583

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 6/206 (2%)

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           E+ L   GL        +    +T   ELS   +    +A  +P   F   +    IR +
Sbjct: 216 EFALLRTGLHRGDIVHVVGYPFLTQMGELSLASVRTRVLAPCIPDIPFKLTD--PDIRAR 273

Query: 128 YRFLDLRRDT--LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
            R LD+  +   + + +  R  I  S+R  M A+ FIE  TP L A +    AR F+  +
Sbjct: 274 QRALDMLANPQLIPRMLKTRHAIFRSIRRMMDAQGFIEVETPSLCALAGGANARPFITKA 333

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G    L  AP+ Y + L+  G DR ++I   FR+E   +D  P EF  ++M  ++ 
Sbjct: 334 RAISGHPLNLRIAPELYLKQLVIGGIDRVYEIGKQFRNEGMDADHHP-EFTTMEMYQAYA 392

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTV 270
             DD+ +  E++L     E    + V
Sbjct: 393 NFDDLFDFTESLLVSTLNEAKQADKV 418


>gi|271499214|ref|YP_003332239.1| lysyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270342769|gb|ACZ75534.1| lysyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 505

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 129/282 (45%), Gaps = 21/282 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G 
Sbjct: 64  LGLEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GD 120

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +
Sbjct: 121 ILGARGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIAN 177

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
              ++  + R++I+  +R  M+  +F+E  TP++    P GA  R F+          Y 
Sbjct: 178 DESRHTFRVRSQILAGIRQFMVGRDFMEVETPMMQVI-PGGASARPFITHHNALDIDMY- 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   
Sbjct: 236 LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIELT 294

Query: 254 ENVLRGVFE------EFSNGNTV---SNNFLRICYDDAIRRY 286
           E++ R + +      E   G+ V      F ++   +AI++Y
Sbjct: 295 ESLFRTLAQNVLGTTEVPYGDQVFDFGKPFEKLTMREAIKKY 336



 Score = 43.9 bits (102), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F +   +K+  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|294624918|ref|ZP_06703573.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292600797|gb|EFF44879.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
          Length = 505

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 128/304 (42%), Gaps = 31/304 (10%)

Query: 5   RTHSCGDL-------------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL              +   G  VR++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPEALEASGRTVRMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  --ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
              N     +   K      ++ ++G  ++R+         TG++ + A  + +L+ +  
Sbjct: 101 LQGNVLGDAYTAFKGWDVGDIVAVEG-GLTRTK--------TGELSVKASALRLLTKSLR 151

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPI 168
            PLP           R++ R++DL      + + +KR++II +MR  + A  F+E  TP+
Sbjct: 152 -PLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPM 210

Query: 169 LTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +    P G  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   
Sbjct: 211 M-HYIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVS 268

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +   P EF  L++  ++     I++  E V+R   +       VS +   I    A RR+
Sbjct: 269 TRHNP-EFTMLELYEAYATYHQIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFRRW 327

Query: 287 GTDK 290
             D+
Sbjct: 328 RMDE 331



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASG-----GIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-RAFQCGMP 534
           +++L  NG E+A+G        +  +    Q  +  G   E +   F   Y RA + GM 
Sbjct: 413 RFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMH--FDADYIRALEYGMA 470

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 471 PTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|260880904|ref|ZP_05403101.2| lysine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260849879|gb|EEX69886.1| lysine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 506

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 111/247 (44%), Gaps = 20/247 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCI 73
           G  VR++G +  +R HG   F  + D  G  QV    D    +  K+   +     ++ I
Sbjct: 67  GGEVRIAGRLMAIRGHGKASFCTLNDRTGNIQVYFKIDVLGEDKYKNQFKKLDIGDIVGI 126

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLD 132
            G+V              G++ +  +  ++LS +   LP    G ++    IR++ R+LD
Sbjct: 127 RGIVFKTH---------RGEVTVRVEDFDLLSKSLRPLPEKFHGLQDV--DIRYRQRYLD 175

Query: 133 LRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGS 190
           L  +  + +   KRT+II S+R  +   +++E  TP+L T +    AR F+         
Sbjct: 176 LIMNPEVRETFRKRTKIIQSIRSYLDTRDYLEVETPVLSTIAGGAAARPFVTHHNALDID 235

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y         K+L++  GFDR +++   FR+E       P EF  ++   ++ +  D++
Sbjct: 236 LYLRIATELNLKRLVIG-GFDRVYEMGRVFRNEGMDVRHNP-EFTTIEFYQAYADYTDMM 293

Query: 251 NTMENVL 257
           +  E ++
Sbjct: 294 DITEGIV 300



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 29/43 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + G+PP GG+  GIDR+VMLL  A ++R+V LFP  +   +
Sbjct: 464 AMEYGLPPTGGVGIGIDRLVMLLTDAPSIRDVLLFPTMKPLAE 506


>gi|32476672|ref|NP_869666.1| lysyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|32447218|emb|CAD77044.1| lysyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 546

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 117/269 (43%), Gaps = 17/269 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
           YR     +    ++G  VR++G +   RP G +IF++IRD  G  Q+           F+
Sbjct: 100 YRQWKADNGPGEEIGPIVRVAGRILLARPTGKLIFMNIRDWTGDIQIFVGKKQVGDENFD 159

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +AK      ++ + G +             TG++ + A+++ +L+   E+P P       
Sbjct: 160 LAKLFDLGDLIGVQGRL---------GRTNTGELTVFAEELFLLTKMLEVP-PEKHAGMT 209

Query: 121 PESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGAR 178
            + +R + R+ DL   D + +  + RT+II S+R  +  + F E   P L T      AR
Sbjct: 210 NQDLRQRMRYADLAFNDGVMQTFLDRTKIIKSIRSTLDDQGFCEVEGPTLHTVPGGAAAR 269

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F             +  A + + + LM  G +R +++   +R+E   S R   EF  L+
Sbjct: 270 PFETHHNALDMQL-TMRIALELHLKRLMVGGMERVYELGRVYRNEG-LSPRHNPEFTMLE 327

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNG 267
              ++   + +++  E ++    E+   G
Sbjct: 328 TYQAYGNYESMMDLTEKIICDAIEKIGGG 356



 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 29/38 (76%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP GG+  GIDR+VM+L   K++R+V LFP+
Sbjct: 505 RALRYGMPPAGGLGIGIDRLVMVLTNQKSIRDVILFPV 542


>gi|120555184|ref|YP_959535.1| lysyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|120325033|gb|ABM19348.1| lysyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 511

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 24/200 (12%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           PLP   +       R+++R++DL  +   + +   R++IIN+MR      +F+E  TP+L
Sbjct: 140 PLPEKHKGLTDTEARYRHRYVDLMVNEDSRRVFHARSKIINAMRQYFAERDFMEVETPML 199

Query: 170 TASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
               P GA  R F+          Y L  AP+ + + L+  GF+R F+I   FR+E   +
Sbjct: 200 QVI-PGGATARPFVTHHNALGIDMY-LRIAPELFLKRLVVGGFERVFEINRNFRNEGLST 257

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-------------- 273
              P EF  ++   ++ + +D+++  E++LR + ++     TV N               
Sbjct: 258 RHNP-EFTMVEFYQAYADYNDLMDLTEDMLRTITQKVLGTTTVINTRVLKDGSEETIEYD 316

Query: 274 ----FLRICYDDAIRRYGTD 289
               F R+   DAI RY  D
Sbjct: 317 FGKPFERLTVVDAILRYNPD 336



 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ MLL  + ++R+V LFP
Sbjct: 461 ALEYGLPPTAGEGIGIDRLAMLLTNSPSIRDVILFP 496


>gi|315041621|ref|XP_003170187.1| lysyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311345221|gb|EFR04424.1| lysyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 567

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 16/182 (8%)

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
           NI++ R+ I NSMR     ++F+E STPIL + S    A+ F+  +        +L  AP
Sbjct: 226 NILRARSLITNSMRTFFANKDFVEVSTPILASKSGGAIAQPFVTSATEFPERPLSLRIAP 285

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+  GFDR F+I P FR+E       P EF   +   +F   + ++ T E++L 
Sbjct: 286 ELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP-EFTTCEFYQAFANLESLIETTESLLS 344

Query: 259 GVFEEFSNGNTVSNNFLR---ICYDDAIRRY----------GTDKPDLRNPIIMHNVTEH 305
            +  E    N   NN L    + +    RR           G   PDL++   +  V E 
Sbjct: 345 TLASEVQQLNEKLNNSLNPTTVSFTGPYRRVDFIPAIEEAIGRKLPDLQSENALSQVKEI 404

Query: 306 FV 307
           F 
Sbjct: 405 FA 406



 Score = 38.9 bits (89), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 22/39 (56%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G     + G+PP GG   GIDR+ ML  GA+ + +V  F
Sbjct: 511 GYLETLEWGLPPTGGWGCGIDRLCMLFTGARRISDVLSF 549


>gi|238792835|ref|ZP_04636466.1| Lysyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238727943|gb|EEQ19466.1| Lysyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 507

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 21/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L   G ++  
Sbjct: 70  VTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGIYNEEFKKWDL---GDILGA 126

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 127 RGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESR 183

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  K R+++++ +R  M+ + F+E  TP++    P GA  R F+          Y L  A
Sbjct: 184 HTFKVRSQVMSGIRSFMVEKGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY-LRIA 241

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E + 
Sbjct: 242 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELF 300

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286
           R + E     + V            F ++   +AI +Y
Sbjct: 301 RTLTETVLGSSVVQYGEQTFDFGKPFAKLTMKEAICKY 338



 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F++   +KE  ++    +   Y  A + G+PP 
Sbjct: 415 RFEFFIGGREIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPT 474

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 475 AGLGIGIDRMVMLFTNSHTIRDVILFP 501


>gi|254480185|ref|ZP_05093433.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214039747|gb|EEB80406.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 497

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 119/263 (45%), Gaps = 20/263 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           FL I+D     Q+  N      E    ++S W L   G +++ S     +    G + ++
Sbjct: 79  FLLIQDGSDQIQLYVNRKGLDEETLAEIKS-WDL---GDIVAASGPLHKSG--KGDLYIN 132

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRM 156
            ++  +L+ A   PLP        + +R++ R++DL  +   + + + R+RII  +R  M
Sbjct: 133 MEQARLLTKALR-PLPDKYHGLSDQEMRYRQRYVDLIVNEESRKVFRTRSRIIAFIRDYM 191

Query: 157 IAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +   F+E  TP++        A+ F+          Y L  AP+ Y + L   GF+R F+
Sbjct: 192 MERGFMEVETPMMQVIPGGAAAKPFVTHHNALDQDMY-LRIAPELYLKRLTVGGFERVFE 250

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV----- 270
           I   FR+E   +   P EF  L+   ++   +D ++  E++LR + +E     TV     
Sbjct: 251 INRSFRNEGLSTRHNP-EFTMLEYYWAYGAFEDAMDLTEDMLRKLTQEVIGSTTVEYQGG 309

Query: 271 ----SNNFLRICYDDAIRRYGTD 289
               S  F+R+   DAI +Y  D
Sbjct: 310 SYDFSQPFVRLSVFDAILQYNAD 332



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VM L  + ++R+V LFP
Sbjct: 456 RALEYGLPPTVGEGIGIDRLVMFLTDSASIRDVLLFP 492


>gi|170092641|ref|XP_001877542.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647401|gb|EDR11645.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 626

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 121/259 (46%), Gaps = 18/259 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC---I 73
           G+   L+G +H +R  G  + F D+       Q++A    A  E  K + S        I
Sbjct: 148 GTVEGLAGRIHNIRASGAKLKFYDLHGEGFKVQIMATQQDAD-EPEKFIASHEHFRRGDI 206

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLD 132
            G+V + S         TG++ +    + +L+    +LP   FG ++  +  R++ R+LD
Sbjct: 207 VGVVGTPSRSK------TGELSICPSSMILLAPNLHQLPSSHFGLKD--QETRYRKRYLD 258

Query: 133 LRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   +N+ K R+RI+N +R  +    F+E  TP+ +  +    A+ F+         
Sbjct: 259 LILNETTRNLFKTRSRILNYVRRFLDNLGFMEVETPMTSMLAGGATAKPFITHHNDLNLD 318

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  G DR ++I   FR+E       P EF   +  M++ + +D++
Sbjct: 319 LY-LRIAPELYLKQLVVGGLDRVYEIGRVFRNEGIDLTHNP-EFTICEFYMAYADMEDLM 376

Query: 251 NTMENVLRGVFEEFSNGNT 269
           +  E +L G+    + G+T
Sbjct: 377 DITEAMLEGLVVSLTGGST 395



 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+ P GG   GIDR+VM L  + N++EV LFP
Sbjct: 566 ALEHGLAPTGGWGLGIDRLVMFLTDSTNIKEVLLFP 601


>gi|313886734|ref|ZP_07820441.1| lysine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923775|gb|EFR34577.1| lysine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 579

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 43/296 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---------VL 71
           V ++G V   R  G   F++++D  G  QV    D  C    K + ++          ++
Sbjct: 57  VSIAGRVMSRRIMGKASFMELQDTSGRIQVYVTRDDLCPGEDKDLYNKLFKKLLDIGDIV 116

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--------PES 123
            + G V             TG+I + A+++ +LS A   PLP+   ++         PE 
Sbjct: 117 GVKGFVFRTQ---------TGEISVHAEELTLLSKALR-PLPIVKAKDDQVFDGFTDPE- 165

Query: 124 IRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDF 180
           +R++ R++DL   D +    +KRT+I  SMR    A  ++E  TP+L  S P G  AR F
Sbjct: 166 LRYRRRYVDLIVNDEVKGIFIKRTKIFQSMRNFFNARGYLEVDTPVLQ-SIPGGAAARPF 224

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + Y + L+  GF+  ++ +  FR+E       P EF  +++ 
Sbjct: 225 VTHHNALDIPLY-LRIANELYLKRLIVGGFEGVYEFSRNFRNEGMDRTHNP-EFTCMEIY 282

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           +++ +   ++   E ++  + +E     T+            + R+   DAI+ YG
Sbjct: 283 VAYKDYRWMMQMTEQMIEHICQEVLGSTTIQVGEHTIEFKPPYRRLTMIDAIQEYG 338



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VMLL G ++++EV LFP
Sbjct: 462 RALEFGMPPTSGMGIGMDRLVMLLTGQESIQEVLLFP 498


>gi|55822784|ref|YP_141225.1| asparaginyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|81820310|sp|Q5M067|SYN_STRT1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|55738769|gb|AAV62410.1| asparaginyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 448

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 112/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDS----------ACFEIAKSV 65
           +G  + +  WV      G I FL +RD     Q VA  P+             F+  K +
Sbjct: 15  IGEEITIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEEGLEKFDTIKHL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 75  SQETSIYVTGMVKEDERSKFG-------YELDINDIEVIGKSQDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR          R  II +         FI+  +PIL++++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAIQQIRNAIIYATYDFFDKNGFIKFDSPILSSNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAI 283
           F+  D+ L+  E  ++ + +   +                   ++  F R+ YD+AI
Sbjct: 239 FLSHDESLDLQEAYVKALIQGAIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEAI 295



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDDYDALVAKMEELGMDRS--EYEFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|332525509|ref|ZP_08401667.1| lysyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332108776|gb|EGJ10000.1| lysyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 492

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 119/259 (45%), Gaps = 23/259 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V ++G +   R  G   F  ++D  G  Q+    D+   E   + +  W    +L  +G 
Sbjct: 57  VSVAGRMMLKRVMGKACFATLQDATGRIQLYVTQDAVGPETLAAFK-RWDLGDILGCEGT 115

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +             TG++ + A  + +L+ +   PLP        +  +++ R++DL  D
Sbjct: 116 LFRTK---------TGELSIKATNVRLLTKSLR-PLPDKFHGMTDQEQKYRQRYVDLMTD 165

Query: 137 TLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP-SRVNQGSFY 192
              ++  V R++ ++S+R  M+   F+E  TP+L    P GA  + F+   + ++Q  F 
Sbjct: 166 DAARSRFVARSKAVSSIRQYMVEHGFLEVETPMLH-PIPGGANAKPFVTHHNALDQEMFL 224

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D+++ 
Sbjct: 225 RI--APELYLKRLLVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWTHHDLMDF 281

Query: 253 MENVLRGVFEEFSNGNTVS 271
            E VLR      +   T+S
Sbjct: 282 TEQVLRHAARAATGSATLS 300



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR++MLL  + ++R+V LFP
Sbjct: 450 RALEYGMPPAGGCGIGIDRLIMLLTDSPSIRDVILFP 486


>gi|313677686|ref|YP_004055682.1| asparaginyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312944384|gb|ADR23574.1| asparaginyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 507

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 29/258 (11%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + GWV   R    + F+ + D   I   Q+VA+P+       K + +   + + G V++ 
Sbjct: 48  VKGWVRTKRGGKPVFFIALNDGSTINNIQIVADPELISENTIKDITTGAAISVIGKVVAS 107

Query: 81  SAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                      GQ +E+ A++IEIL  A+    P+  ++   E +R K   L +R  T  
Sbjct: 108 QG--------AGQSVEIVAEQIEILGKADPEKYPLQPKKHSMEFMREKAH-LRMRSSTFS 158

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
                R  +  ++      + F    TPI+TA+  EGA +    +  +        +   
Sbjct: 159 AVFRIRHSLAFAIHQFFHEKGFYNLHTPIITANDAEGAGETFHVTNFDLDKIPMTDEGKV 218

Query: 200 QYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            YKQ                  L A      +   P FR E+  + R   EF+ ++ EM+
Sbjct: 219 DYKQDFFGKETNLTVSGQLEGELSAMALGEIYTFGPTFRAENSNTTRHLAEFWMVEPEMA 278

Query: 243 FVEQDDILNTMENVLRGV 260
           F + +D +N  E +L+ V
Sbjct: 279 FYDLNDNMNLAEEMLKYV 296


>gi|91091536|ref|XP_970641.1| PREDICTED: similar to Asparaginyl-tRNA synthetase CG10687-PA
           [Tribolium castaneum]
 gi|270000923|gb|EEZ97370.1| hypothetical protein TcasGA2_TC011193 [Tribolium castaneum]
          Length = 550

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 122/280 (43%), Gaps = 27/280 (9%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V++ GWVHR+R  G  ++F+ +RD  G  Q V   D  C        +  VL  +  V+ 
Sbjct: 130 VKIYGWVHRLRRQGKNLMFITLRDGTGFLQSVLT-DKLC-----QTYNALVLSTESSVLL 183

Query: 80  RSA--ETINANIITGQIELSAQKIEILSVAEELPL-PVFGEREYPESIRFKYRFLDLRRD 136
             +  +        G  EL+    E++ +A       +  E+  P+ ++ + R + +R +
Sbjct: 184 YGSLKKVPEGKTAPGGHELAVDYWELVGLAPPGGADSILNEQALPD-VQAENRHIMIRGE 242

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
              K +  R+ ++ + R   +   + E + P +  +  EG           + ++  L Q
Sbjct: 243 NTSKILRMRSVLLQAFRDHYLDRGYCEVTPPSIVQTQCEGGSTLFKMDYFGEEAY--LTQ 300

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  + S  D  F IA  FR E  R+ R   E+  ++ E  F+  +D+L+ +E++
Sbjct: 301 SSQLYLETCLPSMGD-VFCIAESFRAEQSRTRRHLAEYTHVEAECPFISFNDLLDRLEDL 359

Query: 257 LRGVFEEFSN---GNTV----------SNNFLRICYDDAI 283
           +  V +       G+ V          +  FLR+ Y DAI
Sbjct: 360 ICDVVDRVLKSPYGDIVHELNPDFQVPTRPFLRMNYSDAI 399



 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R H  E ++  +   GI        +       + G  PHGG   G+
Sbjct: 467 LLPNVGEIVGGSMRIHNLEELMDGYKREGIDP----TPYFWYTDQRKYGTCPHGGYGLGL 522

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R V  LL   ++REV L+P   + C
Sbjct: 523 ERFVCWLLNRYHIREVCLYPRYLHHC 548


>gi|327539769|gb|EGF26372.1| lysyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 546

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 117/269 (43%), Gaps = 17/269 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
           YR     +    ++G  VR++G +   RP G +IF++IRD  G  Q+           F+
Sbjct: 100 YRQWKADNGPGEEIGPIVRVAGRILLARPTGKLIFMNIRDWTGDIQIFVGKKQVGDENFD 159

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +AK      ++ + G +             TG++ + A+++ +L+   E+P P       
Sbjct: 160 LAKLFDLGDLIGVQGRL---------GRTNTGELTVFAEELFLLTKMLEVP-PEKHAGMT 209

Query: 121 PESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGAR 178
            + +R + R+ DL   D + +  + RT+II S+R  +  + F E   P L T      AR
Sbjct: 210 NQDLRQRMRYADLAFNDGVMQTFLDRTKIIKSIRSTLDDQGFCEVEGPTLHTVPGGAAAR 269

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F             +  A + + + LM  G +R +++   +R+E   S R   EF  L+
Sbjct: 270 PFETHHNALDMQL-TMRIALELHLKRLMVGGMERVYELGRVYRNEG-LSPRHNPEFTMLE 327

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNG 267
              ++   + +++  E ++    E+   G
Sbjct: 328 TYQAYGNYESMMDLTEKIICDAIEKIGGG 356



 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 29/38 (76%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP GG+  GIDR+VM+L   K++R+V LFP+
Sbjct: 505 RALRYGMPPAGGLGIGIDRLVMVLTNQKSIRDVILFPV 542


>gi|303247151|ref|ZP_07333426.1| asparaginyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302491577|gb|EFL51462.1| asparaginyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 462

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 25/258 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDG 75
           G+  R+ GWV   R   G  FL+I D   +T  Q + +  +    + K + +       G
Sbjct: 18  GAEARVMGWVRTRRDAKGFSFLEINDGSCLTNLQAIVDDGAQGAALLKELGT-------G 70

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             ++ + E + +     + EL A K+E+L  A+    P+  +R   E +R     L  R 
Sbjct: 71  AAVAVTGELVPSPGKGQRFELRATKLELLGPADSETYPLQKKRHSDEFLR-TIAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF------------LVP 183
           +     +  R+ +  ++     A  F    TPI+T S  EGA +             L P
Sbjct: 130 NKYGAMLRLRSALGQAVHAFFAARGFAWVQTPIITGSDCEGAGEMFRVTALSDAESCLPP 189

Query: 184 SRVNQGSFYALPQAPQQYKQLL---MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+A         QL    +A    + +   P FR E   + R   EF+ L+ E
Sbjct: 190 GERASRDFFAKDAYLTVSGQLSAEPLALALGKVYTFGPTFRAEHSDTSRHAAEFWMLEPE 249

Query: 241 MSFVEQDDILNTMENVLR 258
           M+F + +D ++  E +L+
Sbjct: 250 MAFADLEDDMDLGEALLK 267


>gi|255580096|ref|XP_002530880.1| lysyl-tRNA synthetase, putative [Ricinus communis]
 gi|223529533|gb|EEF31486.1| lysyl-tRNA synthetase, putative [Ricinus communis]
          Length = 607

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 6/153 (3%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R+LDL  +   + I K R+RII  +R  + + +F+E  TP++   +    AR 
Sbjct: 248 QETRYRQRYLDLMLNLEVRQIFKTRSRIITYIRSFLDSLDFLEVETPMMNMIAGGAAARP 307

Query: 180 FLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           F+   + +N   F  +  AP+ Y + L+  G DR ++I   FR+E       P EF   +
Sbjct: 308 FVTHHNELNMRLFMRI--APELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTTCE 364

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
             M+F + +D++   E +L G+ +E + G+ + 
Sbjct: 365 FYMAFADYNDLMELTERLLSGMVKELTGGHKIK 397



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M+L  ++N++EV LFP
Sbjct: 559 ALEYGLPPTGGWGMGIDRLAMILTDSQNIKEVLLFP 594


>gi|254304063|ref|ZP_04971421.1| lysine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148324255|gb|EDK89505.1| lysine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 493

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 120/282 (42%), Gaps = 36/282 (12%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLCIDGLV 77
           + +G +  +R  G + F  I D  G  Q+    D    E    I K +    ++ I+G +
Sbjct: 57  KTAGRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNVGDIIGIEGEL 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDL--- 133
                E         ++ L  + I +L+     LP    G  +    IR++ R++DL   
Sbjct: 117 FITHTE---------ELTLRVKSIALLTKNVRSLPEKYHGLTDV--EIRYRKRYVDLIMN 165

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
              RDT     +KRT+II ++R  +    F+E  TP++        A+ F+         
Sbjct: 166 PEVRDTF----IKRTQIIKAVRKYLDDRGFLEVETPLMHPILGGAAAKPFVTHHNALNLD 221

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R +++   FR+E   +   P EF  +++  S    +D++
Sbjct: 222 LY-LRIAPELYLKKLIVGGFERVYELGRNFRNEGISTRHNP-EFTMIELYQSHANFNDMM 279

Query: 251 NTMENVLRGVFEEFSNGNTVS--------NNFLRICYDDAIR 284
           +  E ++  V +E +    +          NF R+   D I+
Sbjct: 280 DLCEGIISSVCQEVNGTTDIEYDGVKLSLKNFARVHMVDMIK 321



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL GA ++R+V LFP
Sbjct: 452 ALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILFP 487


>gi|164657151|ref|XP_001729702.1| hypothetical protein MGL_3246 [Malassezia globosa CBS 7966]
 gi|159103595|gb|EDP42488.1| hypothetical protein MGL_3246 [Malassezia globosa CBS 7966]
          Length = 518

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 118/294 (40%), Gaps = 37/294 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ------VVANPDSACFEIAKSVR 66
           GV +    V++ GWVHR+R     +FL +RD  G  Q      ++   D+    +  SV 
Sbjct: 88  GVQNRDVRVKVCGWVHRLRSQKDRMFLVLRDGTGYLQCVLQGALIQTYDALTLTLESSV- 146

Query: 67  SEWVLCIDGLVMSRSAETINANII---TGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            E    I  L   ++A   +  ++   T   +       I++   E   P         S
Sbjct: 147 -ELYGVIKTLPEGKTAPDNHELVVDYWTCVGKAPGGDDAIMNRVSENADP---------S 196

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           I    R L LR +T    +  R  +++  R    +   +E + P +  +  EG       
Sbjct: 197 ILADNRHLVLRGETASAILRVRAAVLDGFRAEFASSGMLEVTPPCMVQTQVEGGATLFQF 256

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               Q SF  L Q+ Q Y +  + +  D Y  +   FR E   + R   E+  L++E++F
Sbjct: 257 DYYGQKSF--LTQSSQLYLETCLPALGDVYC-VQESFRAEKSHTRRHLSEYTHLEIELAF 313

Query: 244 VEQDDILNTME-------------NVLRGVFEEFSNG-NTVSNNFLRICYDDAI 283
           V  DD+L+ +E             +  R + E+ + G       FLR+ Y DAI
Sbjct: 314 VSFDDLLSHIEQDICGMVDRVLKDDKTRALIEQLNPGFQPPKRPFLRLNYKDAI 367


>gi|156932659|ref|YP_001436575.1| lysyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|166229806|sp|A7MR65|SYK_ENTS8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|156530913|gb|ABU75739.1| hypothetical protein ESA_00442 [Cronobacter sakazakii ATCC BAA-894]
          Length = 505

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 125/285 (43%), Gaps = 23/285 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++    
Sbjct: 70  VAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGARG 126

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKN 141
           +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL   D   K 
Sbjct: 127 KLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLIANDESRKT 183

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQ 199
              R++I+  +R  M+   F+E  TP++    P GA  R F+          Y L  AP+
Sbjct: 184 FKVRSQILAGIRQFMVGRGFMEVETPMMQVI-PGGASARPFVTHHNALDLDMY-LRIAPE 241

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R 
Sbjct: 242 LYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFRT 300

Query: 260 VFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDL 293
           + ++      V            F ++   +AI++Y   TD  DL
Sbjct: 301 LAQDVLGTTQVPYGEETFDFGKPFEKLTMREAIKKYRPETDLADL 345



 Score = 43.9 bits (102), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F +   +K+  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|294666712|ref|ZP_06731948.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|292603537|gb|EFF46952.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 505

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 128/304 (42%), Gaps = 31/304 (10%)

Query: 5   RTHSCGDL-------------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL              +   G  VR++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPEALEASGRTVRMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  --ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
              N     +   K      ++ ++G  ++R+         TG++ + A  + +L+ +  
Sbjct: 101 LQGNVLGDAYTAFKGWDVGDIVAVEG-GLTRTK--------TGELSVKASALRLLTKSLR 151

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPI 168
            PLP           R++ R++DL      + + +KR++II +MR  + A  F+E  TP+
Sbjct: 152 -PLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPM 210

Query: 169 LTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +    P G  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   
Sbjct: 211 MH-YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVS 268

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +   P EF  L++  ++     I++  E V+R   +       VS +   I    A RR+
Sbjct: 269 TRHNP-EFTMLELYEAYATYHQIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFRRW 327

Query: 287 GTDK 290
             D+
Sbjct: 328 RMDE 331



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASG-----GIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-RAFQCGMP 534
           +++L  NG E+A+G        +  +    Q  +  G   E +   F   Y RA + GM 
Sbjct: 413 RFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMH--FDADYIRALEYGMA 470

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 471 PTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|227522413|ref|ZP_03952462.1| lysyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227090471|gb|EEI25783.1| lysyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 501

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 136/305 (44%), Gaps = 26/305 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F D++D  G  Q+    D    +I    +   +    G  +  
Sbjct: 61  VTVAGRMMAKRGKGKVGFADLKDRTGKIQIYVRKDIVGDDIYHIFKRSDI----GDHLGI 116

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTL 138
           S + I  ++  G++ + A+ +  LS A   PLP        +  +++ R+LDL   +D+ 
Sbjct: 117 SGQIIKTDM--GELTVRAESVTFLSKALR-PLPDKWHGLQDKEQKYRQRYLDLISNQDSF 173

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
            +   KR+ II ++R  + + +++E  TP+L   +    AR F+          Y L  A
Sbjct: 174 DR-FHKRSHIITAIRNYLDSHDYLEVETPVLHNQAGGANARPFITHHNALNIDLY-LRIA 231

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G +R ++I   FR+E   +   P EF  L+  +++ +  D+++  E + 
Sbjct: 232 LELHLKRLIVGGMERVYEIGRVFRNEGMDTRHNP-EFTMLESYVAYYDFHDVMDETEGIF 290

Query: 258 RGVFEEFSNGNTVSNNFLRICYD---------DAIRRY-GTD--KPDLRNPIIMHNVTEH 305
           +   +  ++   ++    RI  D         DAI+ Y G D  KP + +        EH
Sbjct: 291 KAAAKTVTDDGMITYQGHRIDLDKPFKRQHMVDAIKEYTGIDFWKP-MDDDDAKKLADEH 349

Query: 306 FVHSE 310
            +H E
Sbjct: 350 HIHYE 354



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 8/52 (15%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GI ++ +E        A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 447 GIDEDYIE--------ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 490


>gi|194766780|ref|XP_001965502.1| GF22422 [Drosophila ananassae]
 gi|190619493|gb|EDV35017.1| GF22422 [Drosophila ananassae]
          Length = 580

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 115/248 (46%), Gaps = 20/248 (8%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           + ++G VH +R  G  +IF D+R      QV+A+        AKS +SE    +D   + 
Sbjct: 114 LSVAGRVHAIRESGAKLIFYDLRGEGVKLQVMAS--------AKSYKSEKDFEVDTAKLR 165

Query: 80  RSAETIN-----ANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           R  + I           G++ +   +I++LS     LP   FG ++  +  R++ R+LDL
Sbjct: 166 R-GDIIGVVGHPGKTKKGELSVMPTEIQLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 222

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
              + + +N   R +II+ +R  +    F+E  TP++   +        V    +     
Sbjct: 223 ILNNKVRENFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNDLKMDL 282

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  DI++ 
Sbjct: 283 FMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYADIMDI 341

Query: 253 MENVLRGV 260
            E ++ G+
Sbjct: 342 TEQLVSGM 349



 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 29/56 (51%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
           A + G+PP GG   GIDR+ M L  + N++EV LFP  +        +P T    Q
Sbjct: 524 ALEYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFPAMKPEEANRTAAPETTPAPQ 579


>gi|110004269|emb|CAK98607.1| putative asparaginyl-trna synthetase protein [Spiroplasma citri]
          Length = 455

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 27/281 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDS-ACFEIAKSVR-SEWVLCID 74
           S V + GWV   R    + FL + D   +   Q+V  P+  A F    S+R S  +  + 
Sbjct: 16  SEVTILGWVRSNRSSSKLGFLVMNDGTVFDNVQIVYRPEQLANFLAISSLRISSAIKVVG 75

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
              ++ SA+           E+ A  IEIL  A E+ PL     ++   S  +      L
Sbjct: 76  KFCLTPSAKQ--------PFEIQASVIEILDEATEDYPL-----QKKEHSYEYLREIAHL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGA-RDFLVPSRV--NQ 188
           R  T   N V R R  +S          NFI   TPI+T +  EGA   F+V +R   N 
Sbjct: 123 RAKTNTFNAVFRIRSSSSFAIHEFFNKNNFIYVHTPIITGNDAEGAGESFIVTTRTDDNY 182

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQ----IAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              +   +A       L A GF + F+      P FR E+  + R   EF+ ++ E++F+
Sbjct: 183 NEDFFGKKASLTVSGQLHAEGFAQAFRNVYTFGPTFRAENSNTTRHAAEFWMIEPEIAFI 242

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           + ++ +  +E +++ +       N+    FL    DD + +
Sbjct: 243 DLEENMALIEKMIKHIINYLFVNNSHELAFLNSNVDDKLLK 283


>gi|21242620|ref|NP_642202.1| lysyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|39932221|sp|Q8PLC6|SYK_XANAC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|21108084|gb|AAM36738.1| lysyl-tRNA synthetase heat inducible [Xanthomonas axonopodis pv.
           citri str. 306]
          Length = 505

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 128/304 (42%), Gaps = 31/304 (10%)

Query: 5   RTHSCGDL-------------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL              +   G  VR++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPEALEASGRTVRMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  --ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
              N     +   K      ++ ++G  ++R+         TG++ + A  + +L+ +  
Sbjct: 101 LQGNVLGDAYTAFKGWDVGDIVAVEG-GLTRTK--------TGELSVKASALRLLTKSLR 151

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPI 168
            PLP           R++ R++DL      + + +KR++II +MR  + A  F+E  TP+
Sbjct: 152 -PLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPM 210

Query: 169 LTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +    P G  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   
Sbjct: 211 MH-YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVS 268

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +   P EF  L++  ++     I++  E V+R   +       VS +   I    A RR+
Sbjct: 269 TRHNP-EFTMLELYEAYATYHQIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFRRW 327

Query: 287 GTDK 290
             D+
Sbjct: 328 RMDE 331



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASG-----GIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-RAFQCGMP 534
           +++L  NG E+A+G        +  +    Q  +  G   E +   F   Y RA + GM 
Sbjct: 413 RFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMH--FDADYIRALEYGMA 470

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 471 PTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|167465842|ref|ZP_02330931.1| lysyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 432

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 94/197 (47%), Gaps = 5/197 (2%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           TG+  +  + +E+L+ +  +PLP          +R++ R++DL     + K  + R++II
Sbjct: 59  TGETSIKVKDLEVLTKSL-IPLPDKFHGLQDVELRYRQRYVDLIMNQDVQKTFILRSKII 117

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            SMRC + +  F+E  TP L A +    AR F+          Y +  A + + + L+  
Sbjct: 118 QSMRCYLDSLGFLEVETPTLHAIAGGASARPFITHHNALDMQLY-MRIAIELHLKRLIVG 176

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           G ++ ++I   +R+E   +   P EF  +++  ++ +  DI+   E+++  + +E     
Sbjct: 177 GLEKVYEIGRVYRNEGVSTRHNP-EFTMIELYEAYADYKDIMQLTEDLISHIAKEVLGST 235

Query: 269 TVSNNFLRICYDDAIRR 285
           T+      +    A RR
Sbjct: 236 TIEYQGKEVNLAGAWRR 252



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG+  G+DR++MLL  A ++R+V LFP
Sbjct: 388 RALEYGLPPTGGLGIGVDRLIMLLTNAPSIRDVLLFP 424


>gi|294155503|ref|YP_003559887.1| asparagine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600455|gb|ADE19951.1| asparagine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 451

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 18/248 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +  WV   R +  + F++I D   +   QVV       F +   +++   + + G     
Sbjct: 22  IKAWVDSNRGNNKLRFININDGSTVKNLQVVLKGKEFDFNLLDQIKNGAAIKVIG----- 76

Query: 81  SAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
              T+ A     Q IEL A  IE+LS  E    P+  +    E++R +   +  R  TL 
Sbjct: 77  ---TLKATPDAPQPIELVATSIELLSNTEN-DYPIQNQEINIETLR-EIPHVRHRTKTLR 131

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             ++ R+ +   +    +A +F   S+PI+T++  EGA +    S  +   F+   +   
Sbjct: 132 SAMLIRSTLAQEIHKYFMANDFYLMSSPIITSNDGEGAGEAFNVSDNSPEPFFGQNKKAT 191

Query: 200 -----QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
                Q      A GF + +  AP FR E   + +   EF+ ++ E++F E +D++   +
Sbjct: 192 LGVTGQLHAESYAIGFKKVYTFAPTFRAEHSNTKKHAAEFWMVEPEVAFYELNDVVKLAD 251

Query: 255 NVLRGVFE 262
           ++L+ V +
Sbjct: 252 HMLKTVIK 259


>gi|114663756|ref|XP_511115.2| PREDICTED: lysyl-tRNA synthetase isoform 2 [Pan troglodytes]
          Length = 611

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 140 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQ 199

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 200 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 248

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 249 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 307

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 308 LY-MRVAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 365

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 366 EITEKMVSGMVKHITGSYKVT 386



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 550 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 585


>gi|154341471|ref|XP_001566687.1| aspartyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134064012|emb|CAM40203.1| putative aspartyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 550

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 110/266 (41%), Gaps = 22/266 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ----VVANPDSACFEIAKSVRSEWVLC 72
           V   V +   V   R  G + F+ +RD     Q    V  +      +    + +E ++ 
Sbjct: 77  VDKTVLIRARVSTTRKKGKMAFMVLRDGRDSVQAMVAVEGDVPKEMIDFVGQIPTESIVD 136

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGE----REYPE----- 122
           ++  V     E    +     IEL  +KI   +V E L  LP   E    +E  E     
Sbjct: 137 VEASVCK--VEQSITSTSHSDIELKVKKIH--TVTESLRTLPFTLEDANRKESDEGAKVN 192

Query: 123 -SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              R   R++DLR          ++R+    R  +I  +F E  +P +  +  EG  +  
Sbjct: 193 FDTRLNSRWMDLRTPASGAIFRLQSRVCQYFRQFLIDSDFCEIHSPKIINAPSEGGANVF 252

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                N+  F  L Q+PQ YKQ+++     R F++ P FR E+  + R   EF  LD+EM
Sbjct: 253 KLEYFNR--FAYLAQSPQLYKQMVLQGDVPRVFEVGPVFRSENSNTHRHLTEFVGLDVEM 310

Query: 242 SFVEQ-DDILNTMENVLRGVFEEFSN 266
              E   ++L+  E++   +FE  + 
Sbjct: 311 RINEHYYEVLDLAESLFNYMFEHLAT 336



 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 12/86 (13%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGIS--KEVVENRFGGLYRAFQCGMPPHG 537
           YD+   G EI+SG  R H  +++L      NV ++  KE V+        +F+ G  PHG
Sbjct: 465 YDMFIRGEEISSGAQRIHDPDLLLARAKMLNVDLTPIKEYVD--------SFRLGAWPHG 516

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G++R+VML LG  NVR  SLFP
Sbjct: 517 GFGVGLERVVMLYLGLGNVRLASLFP 542


>gi|116620161|ref|YP_822317.1| lysyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|116223323|gb|ABJ82032.1| lysyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 501

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 5/170 (2%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRII 149
           TG++ + A+K+E LS    L +P           R++ R+LDL  +  + K  V R +II
Sbjct: 121 TGELSIHAEKLEFLSKTL-LSMPEKWHGLEDVETRYRQRYLDLIANADVRKVFVTRAKII 179

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           +S+R ++ A NFIE  TP++        AR F+          Y L  AP+ Y + L+  
Sbjct: 180 SSLRRQLEARNFIEVETPMMQPLYGGAAARPFVTHHNTLDIDLY-LRIAPELYLKRLVVG 238

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           G +R ++I   FR+E   +   P EF  L+   ++ +   +++  E +LR
Sbjct: 239 GMERVYEINRNFRNEGLSTHHNP-EFTMLEFYQAYTDYRGLIDFSEELLR 287



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA   GMPP GG   GIDR+ M+L G++++R+V LFP+
Sbjct: 445 RALAYGMPPTGGEGIGIDRLTMILTGSRSIRDVILFPL 482


>gi|22127148|ref|NP_670571.1| lysyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45443319|ref|NP_994858.1| lysyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|51597474|ref|YP_071665.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108806378|ref|YP_650294.1| lysyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108813247|ref|YP_649014.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145597934|ref|YP_001162010.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|150260101|ref|ZP_01916829.1| lysyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153947369|ref|YP_001399867.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162420680|ref|YP_001608157.1| lysyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165924940|ref|ZP_02220772.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165937386|ref|ZP_02225950.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166010379|ref|ZP_02231277.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166212829|ref|ZP_02238864.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399819|ref|ZP_02305337.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167418755|ref|ZP_02310508.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425298|ref|ZP_02317051.1| lysyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|170023173|ref|YP_001719678.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186896594|ref|YP_001873706.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218928061|ref|YP_002345936.1| lysyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229837574|ref|ZP_04457736.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229840797|ref|ZP_04460956.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229842644|ref|ZP_04462799.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229903703|ref|ZP_04518816.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270487482|ref|ZP_06204556.1| lysine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294502945|ref|YP_003567007.1| lysyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|32130174|sp|Q8ZHK5|SYK_YERPE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81638631|sp|Q666T3|SYK_YERPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|122979986|sp|Q1CF16|SYK_YERPN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123072973|sp|Q1CB23|SYK_YERPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166230602|sp|A4TIC5|SYK_YERPP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166980072|sp|A7FF39|SYK_YERP3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710933|sp|A9R4M4|SYK_YERPG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238688479|sp|B1JPH6|SYK_YERPY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238691348|sp|B2K0N6|SYK_YERPB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|21960209|gb|AAM86822.1|AE013928_7 lysine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45438188|gb|AAS63735.1| lysyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|51590756|emb|CAH22401.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108776895|gb|ABG19414.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108778291|gb|ABG12349.1| lysyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115346672|emb|CAL19555.1| lysyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145209630|gb|ABP39037.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149289509|gb|EDM39586.1| lysyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152958864|gb|ABS46325.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162353495|gb|ABX87443.1| lysyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165914860|gb|EDR33473.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165923140|gb|EDR40291.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990865|gb|EDR43166.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166206121|gb|EDR50601.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962749|gb|EDR58770.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050527|gb|EDR61935.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055698|gb|EDR65482.1| lysyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169749707|gb|ACA67225.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186699620|gb|ACC90249.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|229679473|gb|EEO75576.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229690954|gb|EEO83008.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229697163|gb|EEO87210.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229704262|gb|EEO91273.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262360980|gb|ACY57701.1| lysyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262364920|gb|ACY61477.1| lysyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270335986|gb|EFA46763.1| lysine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294353404|gb|ADE63745.1| lysyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320014036|gb|ADV97607.1| lysyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 505

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 125/278 (44%), Gaps = 21/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+  + D     +      +W L   G ++  
Sbjct: 68  VTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYNEEFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 RGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  K R+++++ +R  M+ + F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 HTFKVRSQVMSGIRSFMVEKGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E + 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELF 298

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRY 286
           R + E     + V            F ++   +AI +Y
Sbjct: 299 RTLTETILGSSVVQYGEQTFDFGKPFAKLTMKEAICKY 336



 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F++   +KE  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYITALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|316972747|gb|EFV56401.1| asparaginyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 852

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 110/245 (44%), Gaps = 10/245 (4%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            ++G  V+L GWVHR+R  G  +IF+ +RD  G  Q V          A  + +E  + I
Sbjct: 426 ENMGCRVKLFGWVHRLRRQGKQMIFIVLRDGTGYLQCVLTGAMCQIYDALILATESSISI 485

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFGEREYPESIRFKYRFLD 132
            G++    A         G  EL A    ++  +    +  V  E  +P+ ++ + R + 
Sbjct: 486 TGILNDLPA----GKEAPGGCELQADFWTLIGRSPPGGVEAVLNEESHPD-VQLEQRHIA 540

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR + + K +  R  ++ + R      N+ E + P L  +  EG       +   Q ++ 
Sbjct: 541 LRGEHMTKLMRLRAALMKAFRDHYYDRNYCEVTPPTLVQTQVEGGSTLFSFNYYGQTAY- 599

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  + S  D Y  IA  +R E  R+ R   E+  ++ E  F+  +++L  
Sbjct: 600 -LTQSSQLYLETCIPSLGDVYC-IAMSYRAEKSRTRRHLSEYTHVEAECPFITFENLLER 657

Query: 253 MENVL 257
           +E+++
Sbjct: 658 IEDIV 662


>gi|169836894|ref|ZP_02870082.1| lysyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 501

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 128/272 (47%), Gaps = 25/272 (9%)

Query: 5   RTHSCGDLGVSDV----GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACF 59
           RTH+C  + V+D     G  V + G V  +R  G + F+ +RD  G  Q+ +  PD    
Sbjct: 32  RTHTCYQI-VNDFENLEGKEVSVVGRVMNLRKFGKLAFIVLRDSSGQVQLFLHGPDVTEL 90

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANII-----TGQIELSAQKIEILSVAEELPLPV 114
           +  + +     L +  L +  S + + A  I     TG+I +  +++ +L+ +   P+P 
Sbjct: 91  DAKRGI-----LGMKQLSLLDSGDYLQATGIVIKTKTGEISVGVRELRLLTKSLR-PIP- 143

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             E+   +  RF+ R+LD+     + +  ++R++   + R  +    FIE +TP+L  ++
Sbjct: 144 --EKLENKEERFRRRYLDMNVNQEVRQRFIRRSKFWQATRDFLNNNGFIEINTPVLEYTT 201

Query: 174 PEGARDFLVP--SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                +  V     +++  FY         K+L+  +GF++ + + P FR+E    + LP
Sbjct: 202 GGADANPFVTYMDALDKQQFYLRISQELPLKRLI-GAGFEKVYDLGPRFRNESYSDEHLP 260

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            E   ++   ++ +     + ME++ + V +E
Sbjct: 261 -EHIAMEWYAAYWDWQKGRSFMEDMYKYVLKE 291


>gi|326531520|dbj|BAJ97764.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 605

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 119/247 (48%), Gaps = 18/247 (7%)

Query: 21  VRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL-VM 78
           V L+G V+  R  G  + F D+R      QV+AN +    E      +E V   D + V+
Sbjct: 114 VSLAGRVYSKRAMGQKLRFYDLRSESQKVQVMANANFYKSEEEFIKTTERVKLGDIVGVL 173

Query: 79  SRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLR-RD 136
            +   T      TG++ +   +I IL+    ++P   +G ++  +  RF+ R+LDL   D
Sbjct: 174 GQPCRTK-----TGELSIRPSEIVILTPCLHQMPHMHYGLKD--KETRFRQRYLDLMMND 226

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLV-PSRVNQGSFYA 193
            + +  V +TRII  +R  +    F+E  TP++    P GA  + F+   + ++   F  
Sbjct: 227 WVKQKFVTKTRIIKYLRNFLDNMGFLEVETPLMNMI-PGGATAKPFVTYHNDLDMNLFMR 285

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++   
Sbjct: 286 I--APELYLKMLVVGGIDRVYEIGRNFRNEGIDLTHNP-EFTMCEFYMAYADYNDLIEIT 342

Query: 254 ENVLRGV 260
           E  L G+
Sbjct: 343 ERFLSGL 349



 Score = 45.1 bits (105), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 526 ALEYGLPPTGGWGCGIDRLTMFLTDSNNIKEVLLFP 561


>gi|189459667|ref|ZP_03008452.1| hypothetical protein BACCOP_00295 [Bacteroides coprocola DSM 17136]
 gi|189433626|gb|EDV02611.1| hypothetical protein BACCOP_00295 [Bacteroides coprocola DSM 17136]
          Length = 580

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 134/286 (46%), Gaps = 25/286 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  Q+    D  C +  K + +     +  L    
Sbjct: 60  VSVAGRIMSRRVMGKASFVELQDSKGRIQIYITRDDICPDENKDLYNVVFKRLLDLGDFI 119

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             E        G+I + AQK+ +LS +   PLP+        + + + PE +R++ R++D
Sbjct: 120 GIEGFVFRTQMGEISIHAQKLTVLSKSIR-PLPIVKYKDGVAYDKFDDPE-LRYRQRYVD 177

Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   K+I +KR ++ NSMR    ++ +IE  TPIL + +    AR F+         
Sbjct: 178 LVVNDGVKDIFLKRNKVYNSMREYFNSKGYIEVETPILQSIAGGAAARPFITHHNALDIP 237

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ +++ + + ++
Sbjct: 238 LY-MRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMEIYVAYKDYNWMM 295

Query: 251 NTMENVLRGVFEEFSNGNT---VSNN-------FLRICYDDAIRRY 286
              EN++  +  +  NG T   V +N       F R+   D+I+ +
Sbjct: 296 KFTENMIEKICMDV-NGTTEVKVGDNIINFKAPFKRVTMLDSIKEF 340



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VML+ G   ++EV  FP
Sbjct: 465 RALEYGMPPTSGMGIGMDRLVMLMTGQSTIQEVLFFP 501


>gi|281337495|gb|EFB13079.1| hypothetical protein PANDA_009023 [Ailuropoda melanoleuca]
          Length = 545

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 114/289 (39%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 122 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 168

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V++  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 169 VLATESSVAVYGMLNLTPEGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 228

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ +    R       + E + P L  +  EG           
Sbjct: 229 NRHMMIRGENMSKILKARSVVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 288

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  +
Sbjct: 289 EEAF--LTQSSQLYLETCIPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFE 345

Query: 248 DILNTMENVLRGVFEEFSNGNTVS-------------NNFLRICYDDAI 283
           ++LN +E+++  V +        S               F R+ Y DAI
Sbjct: 346 ELLNRLEDLVCDVVDRVLKSPAASIVRDLNPNFKPPKRPFKRMNYSDAI 394


>gi|55820868|ref|YP_139310.1| asparaginyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|81820473|sp|Q5M4S8|SYN_STRT2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|55736853|gb|AAV60495.1| asparaginyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
          Length = 448

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 112/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDS----------ACFEIAKSV 65
           +G  + +  WV      G I FL +RD     Q VA  P+             F+  K +
Sbjct: 15  IGEEITIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEEGLEKFDTIKHL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 75  SQETSIYVTGMVKEDERSKFG-------YELDITDIEVIGKSQDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR          R  II +         FI+  +PIL++++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAIQQIRNAIIYATYDFFDKNGFIKFDSPILSSNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAI 283
           F+  D+ L+  E  ++ + +   +                   ++  F R+ YD+AI
Sbjct: 239 FLSHDESLDLQEAYVKALIQGAIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEAI 295



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDDYDALVAKMEELGMDRS--EYEFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|169629405|ref|YP_001703054.1| lysyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|296439663|sp|B1MAX9|LYSX_MYCA9 RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|169241372|emb|CAM62400.1| Probable lysyl-tRNA synthetase 2 LysX [Mycobacterium abscessus]
          Length = 1110

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 15/221 (6%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+  +   +  GS V +SG + R+R +GG++F  +RD     Q++ + D    E     
Sbjct: 660 SHTVAEALAAPDGSEVVISGRLLRIRDYGGVLFAQLRDWSAEVQLLID-DPRLHE----- 713

Query: 66  RSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
             E+   +D G ++  S     +N  T  + + + +I I      LP    G  + PE+ 
Sbjct: 714 --EFTAAVDLGDLVEASGVMGQSNNGTRSVLVESWRI-IGKCLHPLPDKRKGLTD-PEA- 768

Query: 125 RFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV 182
           R + R+LDL  +    + I  R+ II S+R  ++A+ F+E  TPIL        AR FL 
Sbjct: 769 RVRARYLDLAINPEAREQIAARSAIITSLRNTLLAQGFLEVETPILQQVHGGANARPFLT 828

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
                    Y L  AP+ Y + L   G ++ F++   FR+E
Sbjct: 829 HINAYNLDLY-LRIAPELYLKRLCVGGVEKVFELGRAFRNE 868



 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 22/118 (18%)

Query: 457  NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI--------RNHMSEVMLQAF 508
            +P T P   +  L         A ++DLV  G E+ +           R  + E  L A 
Sbjct: 1005 SPLTRPHRSIAGL---------AERWDLVAWGVELGTAYTELTDPVEQRRRLYEQSLLAA 1055

Query: 509  SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                 + E+ E+      RA +  M P GG+  G+DR+VML+ G +++RE   FP+++
Sbjct: 1056 GGDAEAMELDED----FLRAMEYAMAPTGGMGMGVDRVVMLITG-RSIRETLPFPLAK 1108


>gi|323357518|ref|YP_004223914.1| lysyl-tRNA synthetase (class II) [Microbacterium testaceum StLB037]
 gi|323273889|dbj|BAJ74034.1| lysyl-tRNA synthetase (class II) [Microbacterium testaceum StLB037]
          Length = 506

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 5/164 (3%)

Query: 110 LPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
           LPLP     E  E  R + RFLDL  RD   + ++ R ++  S+R      +F+E  TP+
Sbjct: 157 LPLPNL-HSELSEESRVRSRFLDLIVRDRARETVLARAKVNASLRRTFTERDFVEVETPM 215

Query: 169 LTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L        AR F+  S       Y L  AP+ + +  +  G DR ++I   FR+E   S
Sbjct: 216 LQVQHGGASARPFVTHSNAFDAELY-LRIAPELFLKRAVVGGIDRVYEINRNFRNEGADS 274

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
              P EF  L+   ++ + + I +  + +++      +   TV+
Sbjct: 275 THSP-EFAMLEAYQAYTDYNGIADLTQTLIQNAAVAVAGSTTVT 317



 Score = 46.2 bits (108), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)

Query: 481 QYDLVCNGFEIASG---------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ++DL   GFE+A+G              + +  L A  +V      ++  F    RA + 
Sbjct: 418 KWDLYVRGFELATGYSELVDPVIQRERFVEQATLAARGDV--EAMSIDEEF---LRALEH 472

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP GG+  GIDR++M + G   +RE  LFP+
Sbjct: 473 GMPPTGGMGMGIDRLLMAITGL-GIRETILFPL 504


>gi|118602601|ref|YP_903816.1| lysyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|259511534|sp|A1AWN8|SYK_RUTMC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|118567540|gb|ABL02345.1| lysyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 497

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 120/253 (47%), Gaps = 15/253 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G +   R  G   F+ ++D  G  Q+    D    E+ ++  +E    +D G ++ 
Sbjct: 59  VSIAGRMMLKRVMGKASFVHVQDSSGQIQLFITRD----ELPENFYNEQFKKLDIGDIVG 114

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
            +      ++  G++ +    I++L+ +   PLP        +  R++ R++DL  +   
Sbjct: 115 ATGVLFKTSV--GELSIRISDIKLLTKSLR-PLPEKFHGLSDQETRYRQRYVDLIMNKTS 171

Query: 140 KNIVKR-TRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQ 196
           +N  KR ++I++ +R      +FIE  TP+L  + P GA  + F           Y L  
Sbjct: 172 RNTFKRRSQIVSYIRNFFNNHDFIEVETPML-QTIPGGAIAKSFETHHNALDMPMY-LRI 229

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  G DR F+++  FR+E   +   P EF  ++   ++    D++N  E +
Sbjct: 230 APELYLKRLIVGGMDRVFEVSRNFRNEGLSTRHNP-EFTMIEFYQAYATYHDLMNLTEKL 288

Query: 257 LRGV-FEEFSNGN 268
            RG+ F+ + + N
Sbjct: 289 FRGIAFDVYGSAN 301



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN---RFGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    + +E   + F      K+  ++   ++   Y RA + GMPP 
Sbjct: 403 RFELFIGGREIANGFSELNDAENQAERFKKQVEEKDASDDEAMQYDADYIRALEYGMPPT 462

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML   + ++R+V LFP
Sbjct: 463 AGEGIGIDRLVMLFTNSPSIRDVLLFP 489


>gi|315613513|ref|ZP_07888420.1| asparagine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315314204|gb|EFU62249.1| asparagine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 447

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 112/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F+  K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  I+ +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIVYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +L+GV +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTDLLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMEELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|152995161|ref|YP_001339996.1| lysyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|150836085|gb|ABR70061.1| lysyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 500

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 13/174 (7%)

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
           +R++ R++DL  +   +   + R++II+++R  +    F+E  TP+L T      AR F+
Sbjct: 160 MRYRQRYVDLIVNEESRETFQMRSKIISTIRRFLEDRRFMEVETPMLQTIPGGASARPFI 219

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                   S Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   
Sbjct: 220 THHNAMDMSMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGTSTRHNP-EFTMIEFYQ 277

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           ++ +  D+++  E++LR V E+     TV+           F+R+   D+I  Y
Sbjct: 278 AYADYKDLMDLTEDMLRTVAEKVLGTTTVTYQGSEYDFGAPFVRMSMLDSILHY 331



 Score = 43.9 bits (102), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 11/92 (11%)

Query: 483 DLVCNGFEIASGG--IRNHMSEVMLQAFSNVGISKEVVENRFGG---------LYRAFQC 531
           D + + FE   GG  I N  SE+           ++V E   G             A + 
Sbjct: 403 DFITDRFEFFVGGREIANGFSELNDPEDQAERFMRQVAEKDAGDDEAMHYDADYINALEY 462

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 463 GLPPTAGEGIGIDRLVMLFTDAPSIRDVLLFP 494


>gi|169848307|ref|XP_001830861.1| lysine-tRNA ligase [Coprinopsis cinerea okayama7#130]
 gi|116508030|gb|EAU90925.1| lysine-tRNA ligase [Coprinopsis cinerea okayama7#130]
          Length = 592

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 118/262 (45%), Gaps = 22/262 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVA------NPDSACFEIAKSVRSEWV 70
           G    L+G +H +R  G  + F D+       Q++A      NPD    E+ +  +   +
Sbjct: 116 GKTESLAGRIHNIRASGSKLRFYDLHGEGVKVQIMATQQDSDNPD-GFVELHEHFKRGDI 174

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYR 129
           + + G   SR+ +        G++ +S   + +L+    +LP   FG ++  +  R++ R
Sbjct: 175 VGVVG-TPSRTKK--------GELSISPSSMVLLAPNLHQLPSSHFGLKD--QETRYRKR 223

Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           +LDL   +   K  + R+RII  +R  +    F+E  TPI +  +        V    + 
Sbjct: 224 YLDLILNENSRKIFITRSRIIAYIRRFLDNLGFMEVETPITSLLAGGATAKPFVTHHNDL 283

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
                L  AP+ Y + L+  G DR ++I   FR+E       P EF   +  M++ +Q+D
Sbjct: 284 NLDLFLRIAPELYLKQLVVGGLDRVYEIGRVFRNEGIDLTHNP-EFTICEFYMAYADQED 342

Query: 249 ILNTMENVLRGVFEEFSNGNTV 270
           ++   E +L G+ +  + G  +
Sbjct: 343 LMEITEIMLEGLVKSLTGGTKL 364



 Score = 42.4 bits (98), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+ P GG   GIDR+VM L  + N++EV LFP
Sbjct: 533 ALEHGLAPTGGWGLGIDRLVMFLTDSTNIKEVLLFP 568


>gi|323703647|ref|ZP_08115289.1| lysyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323531362|gb|EGB21259.1| lysyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 509

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 127/286 (44%), Gaps = 14/286 (4%)

Query: 5   RTHSCGDL---GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH   D+     +  G  V ++G +   R  G   F +++D  G  Q+ A  D    ++
Sbjct: 55  RTHLTADIINNFAAMEGQTVVIAGRIMAKRVMGKASFANLQDSAGNIQIYARLD----DL 110

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                S +     G ++  S +        G+I +  +K  +L+ +   PLP        
Sbjct: 111 GAEEYSRFEKLDIGDIIGCSGKVFKTR--KGEITVHIEKYTMLAKSLR-PLPEKWHGLKD 167

Query: 122 ESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
             +R++ R++DL  +  + +  V R+RI+ ++R  +    F+E  TP++   +    AR 
Sbjct: 168 VDLRYRQRYVDLIVNPEVKQTFVIRSRIVRAIRNYLDQRGFLEVETPMMHPIAGGASARP 227

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+        + Y +  AP+ Y + L+  GFD+ ++I   FR+E   +   P EF  L++
Sbjct: 228 FITHHNALDMNLY-MRIAPELYLKRLLVGGFDKVYEINRNFRNEGISTKHNP-EFTSLEL 285

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             ++ +  D+++  E+++  V  E     T+    + I      RR
Sbjct: 286 YQAYGDYHDMMDLTEDLISHVAREVLGTTTLEYEGVEISLAKPWRR 331



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 29/38 (76%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A + GMPP GG+  GIDR+VMLL  + ++R+V LFP+
Sbjct: 467 QALEYGMPPAGGLGIGIDRLVMLLTNSSSIRDVILFPL 504


>gi|73945455|ref|XP_849060.1| PREDICTED: similar to Asparaginyl-tRNA synthetase, cytoplasmic
           (Asparagine--tRNA ligase) (AsnRS) isoform 1 [Canis
           familiaris]
          Length = 559

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 114/289 (39%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 136 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 182

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V++  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 183 VLATESSVTVYGTLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 242

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ +    R       + E + P L  +  EG           
Sbjct: 243 NRHMMIRGENMSKILKARSVVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFG 302

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  +
Sbjct: 303 EEAF--LTQSSQLYLETCIPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFE 359

Query: 248 DILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAI 283
           ++LN +E+++  V +                N       F R+ Y DAI
Sbjct: 360 ELLNRLEDLVCDVVDRVLKSPAGSIVRDLNPNFKPPKRPFKRMNYSDAI 408


>gi|289617341|emb|CBI56108.1| unnamed protein product [Sordaria macrospora]
          Length = 915

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 25/269 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ-VVANPDSACFE----IAKSVRSE 68
            ++G  V     VH VR     + F+  RD     Q V++  D    E     A+ + +E
Sbjct: 111 QNIGKTVSFRARVHHVRAMSSKLAFIVFRDQIETVQGVLSVRDGVVSENFVRWAEHITAE 170

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--------EREY 120
             + ++G +     E     +   ++ + +  + ++ + E LP+ V          E   
Sbjct: 171 GFVHVEGKLQQPPEEIKGCTVHNMEVLIESMYL-VVPIDEHLPVDVHSIDHVEMDSETHQ 229

Query: 121 PES-----IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
            ES     +R   R   LR  T          I +  R  +  + FIE  TP L  ++ E
Sbjct: 230 LESLASTRVRVSNRIAFLRTPTAQSIFRINAGICSVFRRYLEDKGFIEIHTPKLQPAATE 289

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
              +    +   + +F  L Q+PQ  KQ+ +++ F R F+I P FR ED  + R   E+ 
Sbjct: 290 SGAEVFKVNYFGRNAF--LAQSPQLAKQMSISADFGRVFEIGPVFRAEDSNTHRHLTEYT 347

Query: 236 QLDMEMSFVEQD--DILNTMENVLRGVFE 262
            +D+EM+ +EQD  + +  ++ +++ +F+
Sbjct: 348 GMDLEMA-IEQDYHEAMQIIDGLMKEIFK 375



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI +GG R H   ++ +     GI    ++    G    F  G+ PH G   
Sbjct: 482 FDIFLRGQEITTGGQRIHRPHLLEERMKKAGIEPLGMQEYLQG----FDYGVLPHAGCGI 537

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV LLL   ++R  SL+P
Sbjct: 538 GLERIVFLLLNLGDIRNASLYP 559


>gi|332846548|ref|XP_003315273.1| PREDICTED: lysyl-tRNA synthetase isoform 1 [Pan troglodytes]
          Length = 625

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 154 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQ 213

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 214 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 262

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 263 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 321

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 322 LY-MRVAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 379

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 380 EITEKMVSGMVKHITGSYKVT 400



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 564 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 599


>gi|258510227|ref|YP_003183661.1| lysyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257476953|gb|ACV57272.1| lysyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 495

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 10/240 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR++G +   R HG   F  + D  G  Q+ A  D    E A  V    V   D L +  
Sbjct: 57  VRIAGRLVARRGHGKATFAVLNDVTGNIQIYAKYDVLGPE-AYDVFQHLVDLGDILGVEG 115

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           +    N     G+I + A+++  L+ +   PLP           R++ R+LDL  +   +
Sbjct: 116 TVFRTN----RGEITVLAEQVTFLTKSLR-PLPEKWHGLKDVETRYRQRYLDLIVNPDVR 170

Query: 141 NI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAP 198
            I + R+RII  +R  +  + F+E  TP L T +S   AR F+          Y L  A 
Sbjct: 171 QIFIARSRIIQEIRRFLDGQGFLEVETPTLHTVASGAHARPFITHHNALDMDLY-LRIAI 229

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+  G +R ++I   +R+E   +   P EF  L++  ++ +  DI++  EN++R
Sbjct: 230 ELHLKRLIVGGLERVYEIGRVYRNEGVSTRHNP-EFTMLELYQAYADFHDIMDLTENMVR 288



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL G  ++R+V LFP+ +   D
Sbjct: 452 ALEHGMPPTGGLGVGIDRLVMLLTGQPSIRDVLLFPLMRERQD 494


>gi|229032204|ref|ZP_04188177.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228728984|gb|EEL79987.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 463

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 128/327 (39%), Gaps = 61/327 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V   
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSSVKVE 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             ++ +  A+           E+ A+KI+I  +++    P+  +R   E +R       L
Sbjct: 77  GKVIATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T   +   R R + +       +   F+   TPI+T S  EGA +     RV     
Sbjct: 125 RPRTNAFSATFRVRSVAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 181

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             +P+                       Q      A  F   +   P FR E+  + R  
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270
            EF+ ++ E++F E  D+++  E++L+   +          EF N            N +
Sbjct: 242 AEFWMVEPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVI 301

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F RI Y +AI+       D + P+
Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328


>gi|289422449|ref|ZP_06424292.1| lysine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289157021|gb|EFD05643.1| lysine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 637

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 116/251 (46%), Gaps = 19/251 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74
           G  V L+G +   R  G   F+ ++D  G  Q     D      +++ K+     ++ I+
Sbjct: 58  GQRVSLAGRIMSKRVMGKASFMHLQDQNGRIQAYVKRDDIGVDEYKLFKTYDLGDIVGIE 117

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
           G V     E ++ ++         +K+ +LS + + LP    G ++    +R++ R++DL
Sbjct: 118 GFVFKTKTEEVSVHV---------EKLVLLSKSLQVLPEKYHGLKDV--DLRYRQRYVDL 166

Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +  + +  + RT+ + ++R  +    F+E  TPIL T +    AR F+          
Sbjct: 167 IVNPEVKEAFLTRTKALKALRSYLDDRGFLEVETPILNTIAGGANARPFITHHNTLDIPM 226

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + Y + L+  GFD+ +++   FR+E       P E+  +++  ++ +  D++ 
Sbjct: 227 Y-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDMKHNP-EYTAIELYQAYADYKDMME 284

Query: 252 TMENVLRGVFE 262
             ENV+  + E
Sbjct: 285 ITENVISHMAE 295



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 28/43 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + G+PP GG+  GIDR++MLL  +  +R+V LFP  +   D
Sbjct: 455 ALEVGLPPTGGLGIGIDRVIMLLTNSTTIRDVLLFPTMKPLRD 497


>gi|83644617|ref|YP_433052.1| lysyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|123726432|sp|Q2SL47|SYK_HAHCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|83632660|gb|ABC28627.1| lysyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 507

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 16/204 (7%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           PLP   +      +R++ R+LDL  +   +   + R+++I S+R  +   +FIE  TP+L
Sbjct: 143 PLPDKHKGLTNTEMRYRQRYLDLITNEEARETFRIRSKVIESIRYFLTKRDFIEAETPML 202

Query: 170 TASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
               P GA  R F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S
Sbjct: 203 QVI-PGGATARPFVTYHNALDIEMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEG-LS 259

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---NFLRICYDDAIR 284
            R   EF  ++   +F +  D++N  E +LR V +E      V N   N      D+ I 
Sbjct: 260 TRHNPEFTMIEFYQAFADYKDLMNLTEEMLRWVAQEALGTTEVRNTSKNTDGDVVDEIIY 319

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVH 308
            +G        P I   V E  +H
Sbjct: 320 DFG-------KPFIRMTVVESILH 336



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 4/94 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EIA+G    +  E   + F      KE  ++    F   Y  A + GMPP 
Sbjct: 414 RFEFFVGGREIANGFSELNDPEDQAERFRKQVAEKEAGDDEAMFFDEDYITALEHGMPPT 473

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G   GIDR+VMLL  + ++R+V LFP  +   D
Sbjct: 474 AGEGIGIDRLVMLLTDSPSIRDVILFPHMRPLAD 507


>gi|206895765|ref|YP_002246946.1| asparaginyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738382|gb|ACI17460.1| asparaginyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
          Length = 428

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 119/296 (40%), Gaps = 36/296 (12%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-----ANPDSACFEIA 62
           S  D+G  + G  V L GW+H  R  G IIF+ +RD  G  QVV       PD   +E A
Sbjct: 3   SIRDIGKHE-GEQVELRGWIHTKREKGKIIFIVMRDGSGFMQVVLEQERLKPDQ--WEQA 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K    E  + + G+  S            G  E+ A   E   + ++ PL   G +E+  
Sbjct: 60  KEASLESSIVVKGVAKSEPR-------APGGYEIHADHFEAFHITKDWPL---GRKEHGI 109

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
               + R L +R       +  R  I N+M   +    F    TPI+T ++ EG      
Sbjct: 110 EFLEENRHLWIRSRKQSAILRIRHTIENAMIDFLNENGFYRFDTPIITTAAAEGTTTLFE 169

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  ++  L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E +
Sbjct: 170 VDYHGDKAY--LSQSGQLYAE-AGALALGKVYTFGPTFRAEKSKTRRHLLEFWMIEPEAA 226

Query: 243 FVEQDDILNTMEN----VLRGVFEEFSNG-----------NTVSNNFLRICYDDAI 283
           + E +D L   E     +++ V EE  +              V   F RI Y +A+
Sbjct: 227 WFEYEDNLQLQEQFVSYIVKRVLEENEDDLAILERPLEPLMKVEPPFPRITYTEAV 282



 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 23/154 (14%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEW----NEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            + + ++N N F+  W  D    E     N+ EK +   H P  +    M+    N  + 
Sbjct: 279 TEAVDLLNKNGFDITWGDDLGAPEETFLSNQYEKPVFLTHFPAKIKAFYMQPDPENPEVV 338

Query: 477 IKAFQYDLVC-NGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAF 529
           + A   DL+   G+ EI  G  R H  +++LQ     G+++E  +      R+G +    
Sbjct: 339 LAA---DLLAPEGYGEIIGGSQRIHDYDLLLQKIREFGLNEEYYQWYLDLRRYGSV---- 391

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                PH G   G++R V  +   +++RE   FP
Sbjct: 392 -----PHSGFGIGLERTVAWICKLEHIRETIPFP 420


>gi|116182572|ref|XP_001221135.1| hypothetical protein CHGG_01914 [Chaetomium globosum CBS 148.51]
 gi|88186211|gb|EAQ93679.1| hypothetical protein CHGG_01914 [Chaetomium globosum CBS 148.51]
          Length = 587

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 114/252 (45%), Gaps = 15/252 (5%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV---RSEWVLCIDGL 76
           V L G V  +R     ++FL +   +  TQ V N     FE   SV   +    L   G 
Sbjct: 77  VTLHGRVDSIRRASSKLVFLHLESEFERTQGVCN--FGKFEDGTSVDALKDLAALLKRGD 134

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++S   + I  +  TG++ + A  +  +     +PLP    +   E  R ++R +D+  +
Sbjct: 135 IISIKGKAIRTS--TGELSIQATHLPKILTPSIIPLPT---KLIDEESRMQHRHIDMLVN 189

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
              ++I++ R+ +   +R  +   +F+E  TPIL   +    AR F V ++       +L
Sbjct: 190 PRTRDILRLRSYLTKYLRDFLHERDFLEFQTPILAGDAGGANARPFTVSAKTISRDV-SL 248

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ + + L+  G DR F++ P FR+E       P EF   +   ++    D+++  E
Sbjct: 249 RIAPELWLKRLVVGGVDRVFELGPAFRNEGIDQTHNP-EFTICEFYHAYANLQDLISLTE 307

Query: 255 NVLRGVFEEFSN 266
           +++RG      N
Sbjct: 308 DLIRGAAAHCQN 319


>gi|269123212|ref|YP_003305789.1| asparaginyl-tRNA synthetase [Streptobacillus moniliformis DSM
           12112]
 gi|268314538|gb|ACZ00912.1| asparaginyl-tRNA synthetase [Streptobacillus moniliformis DSM
           12112]
          Length = 460

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/339 (20%), Positives = 138/339 (40%), Gaps = 53/339 (15%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V+L GWV ++R      F++  D  ++   Q+V + +   FE    +     + ++G ++
Sbjct: 18  VKLDGWVKKIRSQKKFGFIEFNDGTYFQGIQIVFDDNLENFEEISKLSIYSSISVEGTLV 77

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
               +        GQ  E+    I + + A+ +  P+  +R   E +R     L  R +T
Sbjct: 78  KSEGK--------GQSFEIKVDNISVYNKAD-ISNPLQNKRHGMEFLR-TIAHLRPRTNT 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---------- 187
            +     R+ + +++    +  NF+   TPI T++  EGA +    + ++          
Sbjct: 128 FNAVFRVRSLLAHAIHKFFMERNFVYVQTPIFTSTDAEGAGEMFQVTTLDLNNLPRNEEN 187

Query: 188 ----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
               +  F+A P       QL     AS F   +   P FR E+  + R   EF+ ++ E
Sbjct: 188 IIDYREDFFAKPSYLTVTGQLHVEAFASAFHNTYTFGPTFRAEESYTARHAAEFWMIEPE 247

Query: 241 MSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRICY 279
           ++F   +  ++  E++++ + +          EF N            N ++N+F R+ Y
Sbjct: 248 IAFANLETNMDIAESMIKYIIKYVMDNAPLEMEFFNTWIEKGIIDKLNNILNNDFGRVTY 307

Query: 280 DDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK 316
            +AI        +   P+   M   TEH  +    VF K
Sbjct: 308 TEAIDILKNSDAEFTIPVEWGMDLKTEHERYLAENVFKK 346


>gi|154499801|ref|ZP_02037839.1| hypothetical protein BACCAP_03458 [Bacteroides capillosus ATCC
           29799]
 gi|150271399|gb|EDM98656.1| hypothetical protein BACCAP_03458 [Bacteroides capillosus ATCC
           29799]
          Length = 500

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 15/247 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G  +F D++D  G  Q+    D    E+ +   + +     G +
Sbjct: 60  GQTVSVAGRLMSKRGMGKAVFCDLQDAQGRIQLYVRID----ELGEEPFARFKKVDIGDI 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
           +    E        G+I + A K+ +LS +   PLP        +  R++ R++DL  + 
Sbjct: 116 VGVEGEAFRTK--RGEISVKANKVTLLSKSLR-PLPEKFHGLTDKETRYRQRYVDLMVNP 172

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
            + +N V R+R I  MR  +    +IE  TP+L T +    AR F+          Y   
Sbjct: 173 EVKRNFVVRSRFIQFMRSYLDNMGYIEVETPVLNTIAGGAAARPFITHHNTLDIDMYMRI 232

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                 K+L++  G DR ++I   FR+E  DP+ +    EF  +++  ++ +   +++  
Sbjct: 233 ATELPLKRLIVG-GMDRVYEIGRIFRNEGMDPKHN---PEFTTVELYQAYTDFHGMMDIA 288

Query: 254 ENVLRGV 260
           E +L G 
Sbjct: 289 EGILSGA 295



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR VM+L  A  +R+V LFP
Sbjct: 459 ALEYGMPPTGGMGMGIDRCVMMLTNADTIRDVILFP 494


>gi|158319501|ref|YP_001512008.1| lysyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158139700|gb|ABW18012.1| lysyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 495

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 115/244 (47%), Gaps = 15/244 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GL 76
           G    ++G +   R HG   F++I+D  G  QV    D    E       E  +  D G 
Sbjct: 53  GQNATIAGRIMTKRGHGKASFINIQDKDGQIQVYVREDKIGAE-----DYELFVTYDIGD 107

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRR 135
           ++    E    N    +I + A ++ +L+ + + LP    G +++   +R++ R++DL  
Sbjct: 108 IIEIKGEIFKTN--KDEISVRANEVRLLTKSIQILPDKWHGLKDH--DLRYRQRYVDLIV 163

Query: 136 D-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193
           +  + K  V R++ I +++  +    ++E  TPIL T +    AR F+          Y 
Sbjct: 164 NPEVKKTFVTRSKAIKAIKEFLDNRGYLEVETPILGTLAGGANARPFITHHNTLDIDMY- 222

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  A + + + L+  GFD+ +++   FR+E       P EF  +++  ++ + +D+++  
Sbjct: 223 LRIANELFLKRLIVGGFDKVYEMGRMFRNEGMSIKHNP-EFTSIELYEAYADYNDMMDIT 281

Query: 254 ENVL 257
           EN++
Sbjct: 282 ENIV 285



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR++ML+  + ++R+V LFP
Sbjct: 450 AIEVGLPPTGGLGIGIDRLMMLITNSPSIRDVLLFP 485


>gi|317059364|ref|ZP_07923849.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313685040|gb|EFS21875.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 461

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 125/307 (40%), Gaps = 57/307 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V+L  WV ++R      FL+I D   +   QVV +     F EI++   +  V+    LV
Sbjct: 19  VKLGAWVRKIRSQKNFGFLEINDGSFFNGIQVVFDTSLENFDEISRLSIASSVIVEGTLV 78

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            S  A         GQ  E+ A K+E+   A+ L  P+  +R   E +R K   L  R +
Sbjct: 79  KSEGA---------GQEFEIKASKVEVCQKAD-LDYPLQNKRHSFEFLRTKSH-LRARTN 127

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVN 187
           T       R+    ++      +NF+   TPI+T+S  EGA +           VP   +
Sbjct: 128 TFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITSSDAEGAGEMFRITTLDLNNVPKNED 187

Query: 188 -----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                Q  F+          QL      + F   +   P FR E   + R   EF+ ++ 
Sbjct: 188 GSINFQKDFFGKSTNLTVSGQLNGETYCAAFRNIYTFGPTFRAEYSNTARHASEFWMIEP 247

Query: 240 EMSFVEQDDILNTMENVL-----------------------RGVFEEFSNGNTVSNNFLR 276
           EM+F + +  ++  E ++                       +G+F++ +  N ++N+F R
Sbjct: 248 EMAFADLEVNMDIAEKMVKYIIRYVMETCPEEMNFFNQFIEKGLFDKLN--NVLNNDFGR 305

Query: 277 ICYDDAI 283
           + Y +AI
Sbjct: 306 LTYTEAI 312



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 4/78 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E++    + +G+ KE     +       + G  PH G   G +R++M 
Sbjct: 384 EIIGGSQREDNLEILENRMNELGMDKE----DYSFYLDLRKYGSFPHSGYGLGFERMIMY 439

Query: 550 LLGAKNVREVSLFPMSQN 567
           L G  N+R+V  FP + N
Sbjct: 440 LTGMANIRDVIPFPRTPN 457


>gi|329963609|ref|ZP_08301087.1| lysine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328528514|gb|EGF55487.1| lysine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 574

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 41/278 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F++++D  G  QV    D  C     E+  +V    +     +
Sbjct: 55  VSVAGRMMSRRVMGKASFIELQDSKGRIQVYITRDDICPGEDKEMYNTVFKRLLDLGDFI 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I+G V              G+I + AQKI +LS + + PLP+        +   E PE 
Sbjct: 115 GIEGFVFRTQM---------GEISIHAQKITVLSKSIK-PLPIVKYKDGVAYDSFEDPE- 163

Query: 124 IRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDF 180
           +R++ R++DL   + + +  +KR +II++MR  +    + E  TPIL  S P G  AR F
Sbjct: 164 LRYRQRYVDLIVNEGVKETFLKRAKIISTMRTVLDEAGYTEVETPIL-QSIPGGASARPF 222

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ 
Sbjct: 223 ITHHNSLDMDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-EFTCVELY 280

Query: 241 MSFVEQDDILNTMENVLR-------GVFEEFSNGNTVS 271
           + + + + +++  E +L        G  E   +G T+S
Sbjct: 281 VQYKDYNWMMSFTEKLLERICIAVNGCTETEIDGKTIS 318



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A Q GMPP  GI  GIDR+ ML+ G   ++EV  FP
Sbjct: 460 KALQYGMPPTSGIGIGIDRLTMLMTGKSFIQEVLFFP 496


>gi|326513972|dbj|BAJ92136.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 298

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 3/145 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R  YR +D+R             + N  R  + ++NFI   TP L   S EG     
Sbjct: 48  QDTRLNYRPIDIRTPANLSTFSIEHHVENKFREFLFSKNFIGIHTPKLIGGSSEGGASVF 107

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 Q +   L Q+PQ YKQ+ +  GF R F++   FR E   + R   EF  LD EM
Sbjct: 108 KLDYNGQPA--CLAQSPQLYKQMAICGGFGRVFEVGSIFRAEKSNTHRHLCEFIGLDAEM 165

Query: 242 SFVEQD-DILNTMENVLRGVFEEFS 265
              E   ++ + ++ +   +F+  +
Sbjct: 166 EIKEHYFEVCDIIDGLFVAIFDHLN 190


>gi|11095909|gb|AAG30114.1|AF285758_1 lysyl-tRNA synthetase [Homo sapiens]
          Length = 625

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 154 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQ 213

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 214 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 262

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 263 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 321

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 322 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 379

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 380 EITEKMVSGMVKHITGSYKVT 400



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 564 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 599


>gi|73956988|ref|XP_536777.2| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 1 [Canis familiaris]
          Length = 597

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 126 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVK 185

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 186 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 234

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 235 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 293

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 294 LY-MRIAPELYHKILVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 351

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 352 EITEKMISGMVKHITGSYKVT 372



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 536 ALEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFP 571


>gi|313205503|ref|YP_004044160.1| lysyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312444819|gb|ADQ81175.1| lysyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 575

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 139/306 (45%), Gaps = 37/306 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCID 74
           G  V ++G +   R  G   F++++D  G  QV  + D    E    + +   + +L I 
Sbjct: 51  GKPVCVAGRIMSRRIMGKASFVELQDSKGRIQVYVSRDDINTEAQPEMYNVVFKKLLDIG 110

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRF 126
             V     +        G+I + AQ++ +LS A   PLP+        F   E PE  R+
Sbjct: 111 DFV---GIKGFVFRTQMGEISVHAQELTVLSKALR-PLPIVKYKDGVAFDAFEDPEQ-RY 165

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   K+I +KRT++  SMR    A+ +IE  TPIL  S P G  AR F+  
Sbjct: 166 RQRYVDLVVNDGVKDIFLKRTKVYQSMRDYFNAQGYIEVETPIL-QSIPGGASARPFITH 224

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  A + Y + L+  GF+  ++ +  FR+E       P EF  +++ +++
Sbjct: 225 HNALDIPLY-LRVADELYLKRLIVGGFEGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAY 282

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRY------GT 288
            + + +++  E ++  +  + +  N ++           F RI   DAI+ +      G 
Sbjct: 283 KDYNWMMDFTERMIEKICLDVNGTNEITVGDKTISFKTPFKRITMIDAIKEHTGIDINGM 342

Query: 289 DKPDLR 294
           D+  LR
Sbjct: 343 DEVQLR 348



 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           R+ + GMPP  G+  G+DR+VML+ G + ++EV  FP
Sbjct: 459 RSLEYGMPPTSGMGIGMDRLVMLMTGQQAIQEVLFFP 495


>gi|307266257|ref|ZP_07547798.1| lysyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918707|gb|EFN48940.1| lysyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 499

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 127/285 (44%), Gaps = 30/285 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74
           G  V L+G +   R HG   F DI+D  G  Q+    D+     +EI K +    ++ + 
Sbjct: 60  GKVVTLAGRIMSKRAHGKASFADIQDRDGRIQIYIKYDTVGEKNYEIFKILDIGDIIGVT 119

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           G V             TG+I +     ++LS + + LP    G ++    +R++ R+ DL
Sbjct: 120 GEVFKSK---------TGEITIRVTDFKLLSKSLQILPEKWHGLKD--PDLRYRQRYTDL 168

Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +   K + +KRT+II ++R  +    F+E  TPIL T +    AR F+          
Sbjct: 169 IINPEVKEVFLKRTKIIKAIREFLDNRGFLEVETPILHTIAGGAAARPFITHHNALDIDM 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G ++ +++   FR+E       P EF  L++  ++ +   ++ 
Sbjct: 229 Y-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNP-EFTLLELYEAYTDYYGMME 286

Query: 252 TMENVLRGVFEEFSNGNT----------VSNNFLRICYDDAIRRY 286
             E +   V ++  NG T          ++  + RI   DAI+ Y
Sbjct: 287 LTEQLFAYVAQKV-NGTTKIVYQGTEIDLTPPWKRITMVDAIKEY 330



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VM +  A ++R+V LFP
Sbjct: 457 ALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILFP 492


>gi|94985010|ref|YP_604374.1| lysyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|94555291|gb|ABF45205.1| lysyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 512

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 115/277 (41%), Gaps = 26/277 (9%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           L+G V  +R  G   F D+ D  G  Q+  +  D+  F   K +    ++ + G      
Sbjct: 69  LAGRVTLLRHMGKAAFADLTDEQGRIQLHFSKQDTEHFNATKKIDLGDIIGVTGFPFVTK 128

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHK 140
                    TGQ+ L  +  + L V    PLP        E +R + R+LDL     + +
Sbjct: 129 ---------TGQLTLRVKSWQPL-VKSLHPLPSKFHGLQDEELRARRRYLDLMVTAGVRQ 178

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPIL--TASSPEGARDFLVPSRVNQGSFYALPQAP 198
               R+RII  +R  +    F+E   P L  TA   E AR F+         F  L  + 
Sbjct: 179 KFQARSRIIRYLRNELDRRGFMEVEGPTLQVTAGGAE-ARPFMTHHNALSHDF-KLRISL 236

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R ++I   +R+E       P EF  L++  ++V+  +I   +E +L 
Sbjct: 237 ELYLKRLLVGGFERIYEIGRVYRNEGIDRTHNP-EFTMLELYWAYVDYTEIARLVEELLS 295

Query: 259 GVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           G+ +E     T             F R+ Y  A+R +
Sbjct: 296 GLAQELHGSYTFEYQGRTLDFTPPFARVDYVGALREH 332



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 16/94 (17%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----------LYRAFQ 530
           ++++ C+GFE+A     N  SE+   AF      +   + R  G             A +
Sbjct: 407 RFEVFCSGFELA-----NAFSELN-DAFDQRARFEAQSQRREAGDEEAHAQDEDFLLALE 460

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GMPP GG+  GIDR+VMLL  + ++R+V LFP+
Sbjct: 461 YGMPPAGGLGIGIDRLVMLLTDSDSIRDVLLFPL 494


>gi|239906653|ref|YP_002953394.1| asparaginyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239796519|dbj|BAH75508.1| asparaginyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 462

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/316 (21%), Positives = 127/316 (40%), Gaps = 48/316 (15%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           +R+ GWV   R   G  FL++ D    G  QV+ +  +   ++ K++     + + G ++
Sbjct: 21  IRVMGWVRTRRDAKGFSFLELNDGSCLGNLQVIIDDTAEGADLVKALGVGASVAVTGELV 80

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +   +        GQ  E+ A  + +L  A+    P+  +R   E +R     L  R + 
Sbjct: 81  ASPGK--------GQRYEVRAASVSLLGAADPETYPLQKKRHSDEFLR-TIAHLRPRTNK 131

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL-------------VPS 184
               +  R  + + +      E F    TP++T S  EGA +               V  
Sbjct: 132 YGAMLRIRAALAHGIHDYFAKEGFALVHTPVITGSDCEGAGEMFRVTTLGPEAAALPVAE 191

Query: 185 RVNQGSF--YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           R++Q  F   A+     Q     +A    R +   P FR E   + R   EF+ L+ EM+
Sbjct: 192 RLSQDFFGKEAMLTVSGQLSAEPLACALGRVYTFGPTFRAEHSDTSRHAAEFWMLEPEMA 251

Query: 243 FVEQDDILNTMENVLR--------------GVFEEFSNG-------NTVSNNFLRICYDD 281
           F + +D +N  E+++               G+F +F +        N ++  F+R+ Y +
Sbjct: 252 FADLEDNMNLAESLVTHLVRLVLAECAEDFGLFAKFVDPTLPATLENLLAEPFVRLPYVE 311

Query: 282 AIRRYGTDKPDLRNPI 297
           A+    + K   + P+
Sbjct: 312 AVDILTSCKKAFQYPV 327



 Score = 37.7 bits (86), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G  PH G   G +R+VML+ G  N+R+V  FP +
Sbjct: 423 GTVPHAGFGLGFERLVMLVTGVTNIRDVMAFPRT 456


>gi|115687312|ref|XP_793463.2| PREDICTED: similar to Lysyl-tRNA synthetase, partial
           [Strongylocentrotus purpuratus]
 gi|115930119|ref|XP_001180301.1| PREDICTED: similar to Lysyl-tRNA synthetase, partial
           [Strongylocentrotus purpuratus]
          Length = 584

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 123/268 (45%), Gaps = 24/268 (8%)

Query: 12  LGVSDVGSFV-RLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFE-----IAKS 64
           L   D+   V  LSG VH  R  G  +IF D+R      QV++N      E     + + 
Sbjct: 103 LKAEDIADEVLSLSGRVHAKRASGAKLIFYDLRGEGVKLQVMSNARYFASEDEFTRLNEK 162

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R   ++ + G    R   T       G++ +   +I +LS    + LP        +  
Sbjct: 163 IRRGDIIGVKG----RPGRTKK-----GELSILPSEITLLSPCLHM-LPHLHYGVTNKET 212

Query: 125 RFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182
           RF+ R+LDL   D +    + R++I++ +R       F+E  TP++   +    A+ F+ 
Sbjct: 213 RFRQRYLDLIMNDYVRDKFITRSKIVSYLRRFFDELGFLEVETPMMNMIAGGATAKPFIT 272

Query: 183 P-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
             + +N   F  +  AP+ Y ++L+  G  R ++I   FR+E       P EF  L+  M
Sbjct: 273 HHNDLNMDLFMRV--APELYLKMLVVGGLQRVYEIGRQFRNEGIDLTHNP-EFTTLEFYM 329

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNT 269
           ++ + +D+++  E +L G+  +F  G+T
Sbjct: 330 AYADYNDLMDIAERLLSGMV-KFVTGST 356



 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQL 584
           A + G+PP GG   GIDR+ M L  + N++EV  FP M  +    + G P   + E L
Sbjct: 523 ALEYGLPPTGGFGLGIDRLAMFLTDSNNIKEVLFFPAMKPDDGRAVDGQPEEGATETL 580


>gi|39997369|ref|NP_953320.1| lysyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|39984260|gb|AAR35647.1| lysyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298506306|gb|ADI85029.1| lysyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 491

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 120/255 (47%), Gaps = 20/255 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVL 71
            D  SF  ++G +   R  G   F+ I+D  G  QV    D+     FE  ++     ++
Sbjct: 51  DDPRSFT-VAGRIIARRSFGKAAFIQIQDRKGRMQVYVRKDTVGDEAFEAFETFDIGDIV 109

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G               TG++ L+A  I +L+ + + PLP           R++ R++
Sbjct: 110 GVGGTPFRTK---------TGELTLNAAFIRLLTKSLQ-PLPEKFHGLTDVETRYRQRYV 159

Query: 132 DLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQ 188
           DL  +   + + VKR+RI+N +R  M+ ++F+E  TP++    P G  AR F+       
Sbjct: 160 DLIVNPEVREVFVKRSRIVNLIREFMVRKDFLEVETPMMQ-PIPGGATARPFVTHHNALD 218

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              + L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++   +D
Sbjct: 219 MQLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYQAYATFED 276

Query: 249 ILNTMENVLRGVFEE 263
           +++  E +L  V +E
Sbjct: 277 LMDFTEELLCHVAQE 291



 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 449 RALEFGLPPTAGEGIGIDRLVMLLTDSPSIRDVILFP 485


>gi|24372578|ref|NP_716620.1| lysyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|39932202|sp|Q8EI58|SYK_SHEON RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|24346596|gb|AAN54065.1|AE015543_5 lysyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 500

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 24/220 (10%)

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--------RFKYRFLDL-RRDTLHK 140
           +TGQ+ LS  K ++    EE  L     R  PE          R++ R++DL   +   +
Sbjct: 113 VTGQLHLSG-KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRQ 171

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
             V R++++ ++R  MI + F+E  TP++    P GA  R F+          Y L  AP
Sbjct: 172 AFVMRSKVVAAIRNFMIKKEFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAP 229

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L 
Sbjct: 230 ELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYQDLMDLTEELLS 288

Query: 259 GVFEEFSNG-------NTVS--NNFLRICYDDAIRRYGTD 289
            +  E           +TV     + R+   +AI++Y  D
Sbjct: 289 SIAIELLGSAQMPYGEHTVDFGGPYARLSMLEAIQKYNPD 328



 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|254491641|ref|ZP_05104820.1| lysyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224463119|gb|EEF79389.1| lysyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 497

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 135/308 (43%), Gaps = 29/308 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y   S  DL  S     V+++G +   R  G   F ++RD  G  Q+    D    ++ +
Sbjct: 47  YEHTSADDLKAS--TRRVKIAGRLMTKRVMGKASFANLRDMSGDMQLYVKRD----DLPE 100

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V +++     G +++  AE +      G++ +    I +L+ +   PLP        + 
Sbjct: 101 GVYAQFKRWDMGDIIA--AEGVMFRTQKGELSVLVDDIRLLTKSLR-PLPEKFHGLSDQE 157

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDF 180
            R++ R++DL  +   +   + RT+II+ +R  ++ + ++E  TP++ A  P GA  R F
Sbjct: 158 TRYRQRYVDLIMNEASRETFRLRTKIIDGVRRFLMDKGYLEVETPMMQAI-PGGATARPF 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                      + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++  
Sbjct: 217 TTYHNSLDMDLF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGLSTRHNP-EFTMVEFY 274

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ +  ++++  E +LR V ++    + V    L I              D   P    
Sbjct: 275 QAYADHHELMDLTEAMLRTVTQDVLGTSKVHYQGLDI--------------DFAQPFTRM 320

Query: 301 NVTEHFVH 308
            VTE  +H
Sbjct: 321 TVTESILH 328



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EIA+G    + +E   + F      K+  ++    +   Y RA + GMPP 
Sbjct: 406 RFEFFVGGREIANGFSELNDAEDQAERFQAQVEEKDAGDDEAMHYDADYIRALEYGMPPT 465

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 466 AGEGIGIDRLVMLLTDSPSIRDVLLFP 492


>gi|297720863|ref|NP_001172794.1| Os02g0139600 [Oryza sativa Japonica Group]
 gi|255670590|dbj|BAH91523.1| Os02g0139600 [Oryza sativa Japonica Group]
          Length = 166

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H+ EV+ +     GI    +         AF+ G PPHGG   
Sbjct: 81  FDVFVRGEEIISGAQRVHVPEVLARQAEERGIDVGSI----AAYVDAFRYGAPPHGGFGV 136

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML  G  N+R+ SLFP
Sbjct: 137 GLERVVMLFCGLGNIRKASLFP 158


>gi|149699374|ref|XP_001501628.1| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 1 [Equus caballus]
          Length = 597

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 124 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIRINNKLRRGDIIGVQ 183

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 184 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 232

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 233 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 291

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 292 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 349

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 350 EITEKMISGMVKHITGSYKVT 370



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 534 ALEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFP 569


>gi|148265268|ref|YP_001231974.1| lysyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146398768|gb|ABQ27401.1| lysyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 494

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 23/263 (8%)

Query: 7   HSCGDLGVSDVGS---------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           H+  DL  +  GS         FV ++G +   R  G   F+ ++D  G  Q+    D+ 
Sbjct: 36  HTSADLFAAYGGSETIDEDPPNFV-VAGRIIARRSFGKAAFVQLQDRKGRFQLYVKKDAI 94

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+     S  +  I G V             TG++ L   +I +L+ +  LPLP    
Sbjct: 95  GDEVFGQFESFDIGDIVGAV------GYPFRTKTGELSLHVLEIRLLTKSL-LPLPEKFH 147

Query: 118 REYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                  R++ R++DL  +   + +  KR+RI+N +R  M+  +F+E  TP++    P G
Sbjct: 148 GLTDVETRYRQRYVDLIVNPEVREVFAKRSRIVNLIRAFMVKNDFLEVETPMMQ-QIPGG 206

Query: 177 --ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+          + L  AP+ Y + L+  G DR F+I   FR+E   S R   EF
Sbjct: 207 ATARPFVTHHNALDMELF-LRIAPELYLKRLVVGGLDRVFEINRNFRNEGI-SVRHNPEF 264

Query: 235 YQLDMEMSFVEQDDILNTMENVL 257
             ++   ++   +D++N  E +L
Sbjct: 265 TMMEFYQAYATFEDLMNFTEELL 287



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VMLL  A ++R+V LFP
Sbjct: 451 RALEYGLPPTAGEGIGIDRLVMLLTDAPSIRDVILFP 487


>gi|293380366|ref|ZP_06626437.1| lysyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|290923049|gb|EFD99980.1| lysyl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 516

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 23/259 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      ++I K       L IDG V
Sbjct: 61  TKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIDGEV 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--R 134
           M            TG++ + A  +  LS A   LP    G ++  E+I ++ R+LDL   
Sbjct: 121 MKTD---------TGELTIRALHVTFLSKALRPLPDKYHGLKDV-EAI-YRQRYLDLITN 169

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
           RD+ +   V RT+II ++R  +  +NF+E  TP+L  + P G  AR F+          Y
Sbjct: 170 RDS-YMRFVHRTQIIQAIRDYLNKQNFLEVETPVL-HNIPGGAEARPFITHHNALDIDLY 227

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                    K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++ 
Sbjct: 228 MRIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDFHDVMDE 285

Query: 253 MENVLRGVFEEFSNGNTVS 271
            E ++R   +  S+   ++
Sbjct: 286 AEGIIRAAAKVVSDDGKIT 304



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 454 RAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 490


>gi|198282779|ref|YP_002219100.1| lysyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665818|ref|YP_002424976.1| lysyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198247300|gb|ACH82893.1| lysyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518031|gb|ACK78617.1| lysyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 496

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 124/296 (41%), Gaps = 30/296 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA---KSVRSEWVLCIDGLV 77
            RL G +   R  G   F DI+D  G  Q+  + D+   E+    K +    ++ +DG++
Sbjct: 59  ARLGGRLMSRRVMGKASFADIQDQSGRIQLFVSRDNLGEEVYARFKGLDLGDIIGVDGIL 118

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRD 136
                        TG++ L    +++LS A   PLP           RF+ R++DL   +
Sbjct: 119 FRTK---------TGELSLKVHSLQLLSKALR-PLPEKWHGLADPETRFRQRYVDLIVTE 168

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYAL 194
              +    R   + ++R  +    F E  TP++    P GA  R F+        + Y L
Sbjct: 169 ATRRTFQIRAETVAALRDGLRQRGFYEAETPMMQ-PVPGGATARPFVTHHHALDMTLY-L 226

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  G ++ F+I   FR+E   +   P EF  L+   ++ +    ++  E
Sbjct: 227 RIAPELYLKRLVVGGIEQVFEINRNFRNEGISTRHNP-EFTMLEWYEAYADHVRAMDLTE 285

Query: 255 NVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTD--KPDLRNPIIM 299
            ++R   +       +S           F R+   +++R +  D    DLR+P ++
Sbjct: 286 TLIRAAAQAALGTTAISYQGLEIDLGKPFHRLTVTESVRAHNPDLADADLRDPAVL 341



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-R 527
           NDL      +++L+  G E+A+G    +  E     F     +K+  +     F   Y R
Sbjct: 394 NDLDPEVTDRFELMIAGRELANGFSELNDPEDQSARFRAQVEAKDAGDEEAMFFDADYIR 453

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G+  GIDR+VMLL    ++REV LFP
Sbjct: 454 ALEYGMPPTAGVGLGIDRLVMLLADQPSIREVILFP 489


>gi|84624383|ref|YP_451755.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|123752737|sp|Q2P1U6|SYK_XANOM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|84368323|dbj|BAE69481.1| lysyl-tRNA synthetase heat inducible [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
          Length = 505

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 129/304 (42%), Gaps = 31/304 (10%)

Query: 5   RTHSCGDL-------------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL              +   G  V+++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPDALEASGRTVKMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  --ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
              N     +   K      ++ ++G  ++R+         TG++ + A  + +L+ +  
Sbjct: 101 LQGNVLGDAYTAFKGWDVGDIVAVEG-GLTRTK--------TGELSVKASALRLLTKSLR 151

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPI 168
            PLP           R++ R++DL      + + +KR++II +MR  + A  F+E  TP+
Sbjct: 152 -PLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPM 210

Query: 169 LTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +    P G  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   
Sbjct: 211 MH-YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVS 268

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +   P EF  L++  ++    +I++  E V+R   +       VS +   I    A RR+
Sbjct: 269 TRHNP-EFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFRRW 327

Query: 287 GTDK 290
             D+
Sbjct: 328 RMDE 331



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASG-----GIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-RAFQCGMP 534
           +++L  NG E+A+G        +  +    Q  +  G   E +   F   Y RA + GMP
Sbjct: 413 RFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMH--FDADYIRALEYGMP 470

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 471 PTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|255564914|ref|XP_002523450.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223537278|gb|EEF38909.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 540

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 21/191 (10%)

Query: 91  TGQIELSAQKIEILSVA-EELPLPV----FGEREYPESI-------------RFKYRFLD 132
           T Q+E+  +K+  +S A   LP+ +      E+E  E++             R  YR LD
Sbjct: 166 TQQVEVQVRKLYCISKAIPTLPINIEDAARSEKEIEEALQRGEQFVRVNQDTRLNYRVLD 225

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R          ++ + N  R  +++E+F E  TP L A S EG     V     +G   
Sbjct: 226 MRTPANQGIFRIQSEVGNIFRQFLLSEDFDEIHTPKLIAGSSEGGS--AVFKLDYKGQPA 283

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILN 251
            L Q+PQ +KQ+ +    +R F++ P FR ED  + R   EF  LD+EM   +   ++++
Sbjct: 284 CLAQSPQLHKQMAICGDKERVFEVGPVFRAEDSYTHRHLCEFVGLDVEMEIKKHYSEVMD 343

Query: 252 TMENVLRGVFE 262
            ++ +   +F+
Sbjct: 344 IVDRLFVKMFD 354



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H+ E++ +     GI    +         +F+ G PPHGG   
Sbjct: 455 FDVFIRGEEIISGAQRVHVPELLEERAKACGIDVSTISTYID----SFRYGAPPHGGFGV 510

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++ML  G  N+R+ SLFP
Sbjct: 511 GLERVIMLFCGLNNIRKTSLFP 532


>gi|166711948|ref|ZP_02243155.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 505

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 129/304 (42%), Gaps = 31/304 (10%)

Query: 5   RTHSCGDL-------------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL              +   G  V+++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPDALEASGRTVKMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  --ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
              N     +   K      ++ ++G  ++R+         TG++ + A  + +L+ +  
Sbjct: 101 LQGNVLGDAYTAFKGWDVGDIVAVEG-GLTRTK--------TGELSVKASALRLLTKSLR 151

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPI 168
            PLP           R++ R++DL      + + +KR++II +MR  + A  F+E  TP+
Sbjct: 152 -PLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPM 210

Query: 169 LTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +    P G  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   
Sbjct: 211 MH-YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVS 268

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +   P EF  L++  ++    +I++  E V+R   +       VS +   I    A RR+
Sbjct: 269 TRHNP-EFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFRRW 327

Query: 287 GTDK 290
             D+
Sbjct: 328 RMDE 331



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASG-----GIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-RAFQCGMP 534
           +++L  NG E+A+G        +  +    Q  +  G   E +   F   Y RA + GM 
Sbjct: 413 RFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMH--FDADYIRALEYGMA 470

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 471 PTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|297744376|emb|CBI37350.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 133/331 (40%), Gaps = 73/331 (22%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE 68
           D G+  +G  + + GWV  +R    +IF+++ D   ++  Q V N D+  ++  +S    
Sbjct: 119 DEGLDRLGQTLAVKGWVRTLRVQSSVIFIEVNDGSCLSNMQCVMNSDADGYDQVES---- 174

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIE-----ILSVAEELP-LPVFGEREYPE 122
                 G + + ++ +I   ++  Q   S QK+E     I++V +  P  P+  +R   E
Sbjct: 175 ------GSITTGASVSIQGTLVASQ--GSKQKVELKVLKIVTVGKSDPSFPIQKKRVSRE 226

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARD- 179
            +R K     LR  T     V R R  +     +   EN F+  S+PI+TAS  EGA + 
Sbjct: 227 FLRTKAH---LRPRTNTFGAVARVRNALAYATHKFFQENGFVWISSPIITASDCEGAGEQ 283

Query: 180 ----FLVPS--RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRY 213
                L+PS       +  A+P+A                      Q      A+     
Sbjct: 284 FCVTTLIPSSREATDSTVDAIPKAKDGLIDWSQDFFGKPAFLTVSGQLNAETYATALSDV 343

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------E 263
           +   P FR E+  + R   EF+ ++ E++F + +D +      L+ V            E
Sbjct: 344 YTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYVVTYILENCKEDME 403

Query: 264 FSN-----------GNTVSNNFLRICYDDAI 283
           F N            +    NF+++ Y DA+
Sbjct: 404 FFNTWIEKGIINRLSDVAEKNFVQLTYTDAV 434


>gi|257452823|ref|ZP_05618122.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 463

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 125/307 (40%), Gaps = 57/307 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V+L  WV ++R      FL+I D   +   QVV +     F EI++   +  V+    LV
Sbjct: 21  VKLGAWVRKIRSQKNFGFLEINDGSFFNGIQVVFDTSLENFDEISRLSIASSVIVEGTLV 80

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            S  A         GQ  E+ A K+E+   A+ L  P+  +R   E +R K   L  R +
Sbjct: 81  KSEGA---------GQEFEIKASKVEVCQKAD-LDYPLQNKRHSFEFLRTKSH-LRARTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVN 187
           T       R+    ++      +NF+   TPI+T+S  EGA +           VP   +
Sbjct: 130 TFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITSSDAEGAGEMFRITTLDLNNVPKNED 189

Query: 188 -----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                Q  F+          QL      + F   +   P FR E   + R   EF+ ++ 
Sbjct: 190 GSINFQKDFFGKSTNLTVSGQLNGETYCAAFRNIYTFGPTFRAEYSNTARHASEFWMIEP 249

Query: 240 EMSFVEQDDILNTMENVL-----------------------RGVFEEFSNGNTVSNNFLR 276
           EM+F + +  ++  E ++                       +G+F++ +  N ++N+F R
Sbjct: 250 EMAFADLEVNMDIAEKMVKYIIRYVMETCPEEMNFFNQFIEKGLFDKLN--NVLNNDFGR 307

Query: 277 ICYDDAI 283
           + Y +AI
Sbjct: 308 LTYTEAI 314



 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 4/78 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E++    + +G+ KE     +       + G  PH G   G +R++M 
Sbjct: 386 EIIGGSQREDNLEILENRMNELGMDKE----DYSFYLDLRKYGSFPHSGYGLGFERMIMY 441

Query: 550 LLGAKNVREVSLFPMSQN 567
           L G  N+R+V  FP + N
Sbjct: 442 LTGMANIRDVIPFPRTPN 459


>gi|149038241|gb|EDL92601.1| lysyl-tRNA synthetase, isoform CRA_a [Rattus norvegicus]
          Length = 499

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 120/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ ++
Sbjct: 155 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 214

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +  +++ +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 215 G---------NPGKTKKGELSIVPREMTLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 263

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 264 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 322

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 323 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 380

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E +L G+    +    ++
Sbjct: 381 EITEKMLSGMVRSITGSYKIT 401


>gi|505108|dbj|BAA06688.1| KIAA0070 [Homo sapiens]
          Length = 601

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 130 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQ 189

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 190 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 238

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 239 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 297

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 298 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 355

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 356 EITEKMVSGMVKHITGSYKVT 376



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 540 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 575


>gi|120597726|ref|YP_962300.1| lysyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|146294137|ref|YP_001184561.1| lysyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166229828|sp|A4Y9X9|SYK_SHEPC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166230589|sp|A1RGF1|SYK_SHESW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|120557819|gb|ABM23746.1| lysyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|145565827|gb|ABP76762.1| lysyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|319427480|gb|ADV55554.1| lysyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 500

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 24/220 (10%)

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--------RFKYRFLDL-RRDTLHK 140
           +TGQ+ LS  K ++    EE  L     R  PE          R++ R++DL   +   +
Sbjct: 113 VTGQLHLSG-KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRQ 171

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
             V R++++ ++R  MI + F+E  TP++    P GA  R F+          Y L  AP
Sbjct: 172 AFVMRSKVVAAIRNFMIKKEFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAP 229

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L 
Sbjct: 230 ELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLS 288

Query: 259 GVFEEFSNG-------NTVS--NNFLRICYDDAIRRYGTD 289
            +  E           +TV     + R+   +AI++Y  D
Sbjct: 289 SIAIELLGSAQMPYGEHTVDFGGPYARLSMLEAIQKYNPD 328



 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|194272210|ref|NP_001123561.1| lysyl-tRNA synthetase isoform 1 [Homo sapiens]
 gi|119616028|gb|EAW95622.1| lysyl-tRNA synthetase, isoform CRA_d [Homo sapiens]
 gi|119616030|gb|EAW95624.1| lysyl-tRNA synthetase, isoform CRA_d [Homo sapiens]
          Length = 625

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 154 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQ 213

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 214 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 262

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 263 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 321

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 322 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 379

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 380 EITEKMVSGMVKHITGSYKVT 400



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 564 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 599


>gi|110598631|ref|ZP_01386897.1| lysyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110339743|gb|EAT58252.1| lysyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 514

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 133/304 (43%), Gaps = 39/304 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +  +R  G   F  I+D  G  Q+    D    E+  +    + L   G ++  
Sbjct: 70  VAVAGRIMTIRKMGKASFFHIQDSKGKIQIYLKKD----EVGDTAYDTFKLLDIGDIVGV 125

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-ESI----------RFKYR 129
              T      TG+I + A+  E+LS +   P+PV  E+E   E +          R++ R
Sbjct: 126 KGYTFKTR--TGEISVHAESFELLSKSLR-PIPVPKEKEVDGEKVVFDAFSDREQRYRQR 182

Query: 130 FLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL  +  + +  +KR+ +++ MR    ++ ++E  TPIL        AR F       
Sbjct: 183 YVDLIVNPEVRQTFIKRSAVVSFMRQFFSSQGWLEVETPILQPIYGGAAARPFTTHHNAL 242

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDMEMSFVEQ 246
               Y L  A + Y + L+  GFD  F+ A  FR+E    DR    EF Q+++ +++ + 
Sbjct: 243 DMELY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEG--IDRFHNPEFTQVELYVAYKDY 299

Query: 247 DDILNTMENVLRGVFEEFSN-------GNTVSNN--FLRICYDDAIRRY------GTDKP 291
           + ++  +E +      E +        GN +S    F R+   DAI  Y      G  + 
Sbjct: 300 NWMMELVEELFYRTALEVNKSEVTLFLGNEISLKPPFKRLSIIDAIEEYCGKNIRGKSEV 359

Query: 292 DLRN 295
           +LRN
Sbjct: 360 ELRN 363



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  GIDR+VML+ G  ++R+V  FP
Sbjct: 473 RALEYGMPPCAGLGIGIDRMVMLITGQDSIRDVIFFP 509


>gi|57491377|gb|AAW51378.1| GekBS062P [Gekko japonicus]
          Length = 597

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 26/262 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 126 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVRINNKLRRGDIIGVQ 185

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 186 G---------SPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 234

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF- 191
              D + +  + R++II  +R  + A  F+E  TP++    P GA     PS        
Sbjct: 235 ILNDFVRQKFIIRSKIITYIRSFLDALGFLEIETPMMNII-PGGA--VAKPSITYHNELD 291

Query: 192 --YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D+
Sbjct: 292 MNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDL 350

Query: 250 LNTMENVLRGVFEEFSNGNTVS 271
           +   E ++ G+ +  +    V+
Sbjct: 351 MEITEKMVSGMVKHITGSYKVT 372



 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 536 ALEYGLPPTGGWGMGIDRVTMFLTDSNNIKEVLLFP 571


>gi|168274342|dbj|BAG09591.1| lysyl-tRNA synthetase [synthetic construct]
          Length = 597

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 126 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQ 185

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 186 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 234

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 235 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 293

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 294 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 351

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 352 EITEKMVSGMVKHITGSYKVT 372



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 536 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 571


>gi|332221732|ref|XP_003260018.1| PREDICTED: lysyl-tRNA synthetase isoform 2 [Nomascus leucogenys]
          Length = 625

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 154 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQ 213

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 214 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 262

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 263 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 321

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 322 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 379

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 380 EITEKMVSGMVKHITGSYKVT 400



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 564 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 599


>gi|58582495|ref|YP_201511.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58427089|gb|AAW76126.1| lysyl-tRNA synthetase heat inducible [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 528

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 129/304 (42%), Gaps = 31/304 (10%)

Query: 5   RTHSCGDL-------------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL              +   G  V+++G +   R  G   F  I+D  G  Q+ 
Sbjct: 64  REHFAGDLQAEFADADTWTPDALEASGRTVKMAGRLMAKRVMGKASFAQIQDESGRVQLF 123

Query: 52  --ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
              N     +   K      ++ ++G  ++R+         TG++ + A  + +L+ +  
Sbjct: 124 LQGNVLGDAYTAFKGWDVGDIVAVEG-GLTRTK--------TGELSVKASALRLLTKSLR 174

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPI 168
            PLP           R++ R++DL      + + +KR++II +MR  + A  F+E  TP+
Sbjct: 175 -PLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPM 233

Query: 169 LTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +    P G  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   
Sbjct: 234 M-HYIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVS 291

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +   P EF  L++  ++    +I++  E V+R   +       VS +   I    A RR+
Sbjct: 292 TRHNP-EFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFRRW 350

Query: 287 GTDK 290
             D+
Sbjct: 351 RMDE 354



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASG-----GIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-RAFQCGMP 534
           +++L  NG E+A+G        +  +    Q  +  G   E +   F   Y RA + GMP
Sbjct: 436 RFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMH--FDADYIRALEYGMP 493

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 494 PTGGLGIGIDRLVMLLTGSTSIRDVLLFP 522


>gi|113969171|ref|YP_732964.1| lysyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|114048687|ref|YP_739237.1| lysyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|117921734|ref|YP_870926.1| lysyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|123029921|sp|Q0HM10|SYK_SHESM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123030336|sp|Q0HRS5|SYK_SHESR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229829|sp|A0L0F1|SYK_SHESA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|113883855|gb|ABI37907.1| lysyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|113890129|gb|ABI44180.1| lysyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|117614066|gb|ABK49520.1| lysyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 500

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 24/220 (10%)

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--------RFKYRFLDL-RRDTLHK 140
           +TGQ+ LS  K ++    EE  L     R  PE          R++ R++DL   +   +
Sbjct: 113 VTGQLHLSG-KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRQ 171

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
             V R++++ ++R  MI + F+E  TP++    P GA  R F+          Y L  AP
Sbjct: 172 AFVMRSKVVAAIRNFMIKKEFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAP 229

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L 
Sbjct: 230 ELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEELLS 288

Query: 259 GVFEEFSNG-------NTVS--NNFLRICYDDAIRRYGTD 289
            +  E           +TV     + R+   +AI++Y  D
Sbjct: 289 SIAIELLGSAQMPYGEHTVDFGGPYARLSMLEAIQKYNPD 328



 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|159130672|gb|EDP55785.1| lysyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
          Length = 478

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 133/316 (42%), Gaps = 28/316 (8%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           C   G + + S +R  G +   R  G  +IF DI       QV+ N          + + 
Sbjct: 10  CRCSGPTRLSSVLRFVGRIRAYRLAGSKLIFFDIFQDGHKVQVMCNIRKLDGVAPDAFKR 69

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----YPES 123
            + L   G   S +         TG++ + A ++  L       +PV  E      YP  
Sbjct: 70  FYRLLRRGDTFSVTGNPHRTG--TGELTVLATELPRLLAPCLHDVPVDAEEHETSPYPRH 127

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFL 181
           ++F         D    +I++ R+ II  +R   +  +F+E STPI+ + +    AR F 
Sbjct: 128 VQFLA-------DQKAADIIRARSAIIQFLRQFFLDRSFMEVSTPIIGSIAGGAIARPFQ 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
             +        +L  AP+ + + L+  GFD+ F+I P FR+E       P EF   +   
Sbjct: 181 TSATEFPDRQLSLRIAPELWLKRLVVGGFDKVFEIGPSFRNEGLDKTHNP-EFTTCEFYH 239

Query: 242 SFVEQDDILNTMENVLRGV---FEEFSNGNTV-------SNNFLRICYDDAIR-RYGTDK 290
           ++   +D+++  EN+L G+    +EF+   ++       S  F R+ +   I  + G   
Sbjct: 240 AYANLEDLMSITENLLSGMAAHIQEFNKNASLKPPEVDFSAPFRRVDFTTGIEGKIGRRL 299

Query: 291 PDLRNPIIMHNVTEHF 306
           PDL  P  +  V++ F
Sbjct: 300 PDLTTPDALDQVSQLF 315


>gi|70727492|ref|YP_254408.1| lysyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|123762274|sp|Q4L3H5|SYK_STAHJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|68448218|dbj|BAE05802.1| Lysyl-tRNA synthetase class II [Staphylococcus haemolyticus
           JCSC1435]
          Length = 496

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 125/275 (45%), Gaps = 22/275 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLCID 74
           S V ++G +   R  G   F  ++D  G  Q+    D    E    + K      ++ I+
Sbjct: 59  SHVSIAGRLMTKRGKGKAGFAHVQDLTGQIQIYVRKDQIGEEDFDNLWKGADLGDIVGIE 118

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
           G++   +         TG++ + A+   +LS A   LP    G ++  +  R++ R+LDL
Sbjct: 119 GVMFKTN---------TGELSVKAKTFTLLSKALRPLPDKFHGLQDIEQ--RYRQRYLDL 167

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGS 190
              +D+  +  + R++II  MR  +  + F+E  TP++   +    AR F+        +
Sbjct: 168 ITNQDST-QTFINRSKIIQEMRNYLNKQGFLEVETPMMHQIAGGAAARPFVTHHNALDAT 226

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI+
Sbjct: 227 LY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYHDIM 284

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +  E+++R + +E      V  N   I  + A  R
Sbjct: 285 DLTESMVRHIAQEVFGSAKVQYNEEEIDLESAWTR 319



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 491


>gi|5031815|ref|NP_005539.1| lysyl-tRNA synthetase isoform 2 [Homo sapiens]
 gi|20178333|sp|Q15046|SYK_HUMAN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|2366752|dbj|BAA22084.1| Lysyl tRNA Synthetase [Homo sapiens]
 gi|13278705|gb|AAH04132.1| Lysyl-tRNA synthetase [Homo sapiens]
 gi|119616026|gb|EAW95620.1| lysyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
 gi|123982972|gb|ABM83227.1| lysyl-tRNA synthetase [synthetic construct]
 gi|123997649|gb|ABM86426.1| lysyl-tRNA synthetase [synthetic construct]
          Length = 597

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 126 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQ 185

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 186 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 234

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 235 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 293

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 294 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 351

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 352 EITEKMVSGMVKHITGSYKVT 372



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 536 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 571


>gi|302524477|ref|ZP_07276819.1| lysyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302433372|gb|EFL05188.1| lysyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 1103

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 131/293 (44%), Gaps = 35/293 (11%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           S  G  VR++G V  +R  GG+ F  I+D  G  Q++   D+   ++     + W   +D
Sbjct: 660 SHTGKRVRVAGRVLALRTLGGLCFARIKDFSGELQLML--DAKVLDL-----TGWRSGVD 712

Query: 75  -GLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLD 132
            G  +  S E I     T + ELS    E    A+ L PLP   +       R + R+LD
Sbjct: 713 LGDHVGVSGEVIT----TRRGELSVLVDEWTITAKCLHPLPDKRKGLTDPETRVRQRYLD 768

Query: 133 LRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGS 190
           L  +    N+++ R+ ++ ++R R+  ++F+E  TP+L T      AR F+         
Sbjct: 769 LAVNPDSANMLRLRSTVVRAVRERLHKDDFLEVETPMLQTIHGGANARPFVTHINAYDMR 828

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L  +G +R F++   FR+E   +   P EF  L+   ++ +     
Sbjct: 829 MY-LRIAPELYLKRLCVAGVERVFELNRNFRNEGVDATHNP-EFTMLEAYQAYAD----Y 882

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           N M +++R + +  +             Y   I R    +PD    I+ H+++
Sbjct: 883 NAMRHLMRDLIQYAAEA----------AYGAQIVR----RPDADGRIVEHDIS 921



 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 13/93 (13%)

Query: 479  AFQYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DL+  G E+ +           R  +    L+A S    + E+ E+       A +
Sbjct: 1010 AERWDLIAFGSEVGTAYTELTDPLEQRRRLEAQSLRAASGDVEAMELDED----FLLALE 1065

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             GMPP GG+  G+DR++M+L G  ++R+  LFP
Sbjct: 1066 HGMPPTGGLGLGVDRLLMMLSG-TSIRQTVLFP 1097


>gi|241594922|ref|XP_002404413.1| aspartyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215500406|gb|EEC09900.1| aspartyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 487

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 117/270 (43%), Gaps = 55/270 (20%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVR 66
           DL  S  GS++ + G +H  R  G   F  +R   Y +  +VA  +     + K    V 
Sbjct: 81  DLSSSIAGSYIWIRGRLHTSRSKGKQCFFVLRQQQYTVQCLVAVSEKVSKAMVKFCALVT 140

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIR 125
            E +L + G+V S S + +        IEL  +++ ++S AE  LPL V  +   PE+  
Sbjct: 141 KESLLDVYGIVQS-SPQKVEG-CTQQDIELHIEQLFVVSAAEPRLPLQV-EDAARPEN-- 195

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST----PILTASSPEGARDFL 181
                                            E+   CS     P   A+S  GA  F 
Sbjct: 196 ---------------------------------EDRRACSNLAFFPSCAAASEGGANVFE 222

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           V     +GS Y L Q+PQ YKQ+ +AS FD+ F +   FR ED  + R   EF  LD+EM
Sbjct: 223 V--SYFKGSAY-LAQSPQLYKQMAIASDFDKVFTVGAVFRAEDSNTHRHLCEFVGLDLEM 279

Query: 242 SF----VEQDDILNTM-ENVLRGVFEEFSN 266
           +F     E  DI+  M  ++ +G+ + +++
Sbjct: 280 AFNYHYHEVLDIIGQMFVDIFKGLRDRYAD 309



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H    + +     G+      ++      +F+ G+ PH G   
Sbjct: 402 YDMFMRGEEILSGAQRIHDPTFLTERAKEHGVDV----SKIKAYIDSFRYGVAPHAGGGI 457

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  N+R+ S+FP
Sbjct: 458 GLERVTMLYLGLDNIRKTSMFP 479


>gi|73956986|ref|XP_850403.1| PREDICTED: similar to lysyl-tRNA synthetase isoform 3 [Canis
           familiaris]
 gi|73956998|ref|XP_861533.1| PREDICTED: similar to lysyl-tRNA synthetase isoform 8 [Canis
           familiaris]
          Length = 625

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 154 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVK 213

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 214 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 262

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 263 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 321

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 322 LY-MRIAPELYHKILVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 379

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 380 EITEKMISGMVKHITGSYKVT 400



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 564 ALEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFP 599


>gi|302802616|ref|XP_002983062.1| hypothetical protein SELMODRAFT_117697 [Selaginella moellendorffii]
 gi|300149215|gb|EFJ15871.1| hypothetical protein SELMODRAFT_117697 [Selaginella moellendorffii]
          Length = 521

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 111/285 (38%), Gaps = 37/285 (12%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
            +LG    GS V + G VH  R  G + FL +R+     Q V +         ++V S+ 
Sbjct: 62  SELGTDLEGSTVLVRGRVHSKRAKGKMAFLVLRETIHTVQCVVS--------MENVGSKQ 113

Query: 70  VLCIDGLVMSRSAETINANI---------ITGQIELSAQKIEILSVA-EELPLPVFG--- 116
            +    L+   S   +  N+          T  +E+   ++  +S +  ELPL +     
Sbjct: 114 FVKYASLLSKESVVDVTGNVSNPRNPVSGTTQPVEIQVTELHCISKSTNELPLLLEDAAR 173

Query: 117 -----EREYPESI---------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFI 162
                E+   E I         R   R LDLR          ++ I +     + A  F 
Sbjct: 174 SDQDIEKAAKEGIQYARVLQDTRLNNRVLDLRIPANQAIFTVQSEISSLFHDFLRANKFR 233

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
           +  TP L A + EG          N      L Q+PQ +KQ+ +   F R F+I P FR 
Sbjct: 234 QIHTPKLIAGASEGGSAVFKLQYANDQP-ACLAQSPQLHKQMAICGDFRRVFEIGPVFRA 292

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSN 266
           E   + R   EF  LD EM   E   +I++ +  +   VF E + 
Sbjct: 293 EKSFTHRHLCEFIGLDFEMEIKEHYFEIIDLIGKLFIYVFNELNK 337



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 2/86 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H  +++L+      I    +         +F  G PPHGGI  
Sbjct: 434 FDVFIRGEEIISGAQRVHDKDLLLKRIEECNIDPNAIG--LQNYINSFSYGAPPHGGIGV 491

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G++R+ ML     N+R+ SLFP   N
Sbjct: 492 GLERVAMLFCNLDNIRKASLFPRDPN 517


>gi|188995021|ref|YP_001929273.1| lysyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|238691484|sp|B2RJY1|SYK_PORG3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|188594701|dbj|BAG33676.1| lysyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 578

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 115/252 (45%), Gaps = 18/252 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL-CID-GLVM 78
           V ++G +   R  G   F++++D  G  Q+    D  C    K   +  V  C D G  +
Sbjct: 57  VSIAGRIMSRRIMGKATFMELQDAEGRIQIYITRDDICPGEDKEFYNTVVKKCTDIGDFI 116

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKYRFL 131
                     +  G+I +  Q++  LS A   PLPV  E++            R++ R++
Sbjct: 117 GVKGYVFRTQM--GEISVHVQEMTFLSKAIR-PLPVVKEKDGEVFDGFTDSEQRYRQRYV 173

Query: 132 DLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQ 188
           DL  ++  K+I +KRT + NSMR       +IE  TP+L  S P G  AR F+       
Sbjct: 174 DLVVNSHVKDIFLKRTMVFNSMRSFFNERGYIEVDTPVL-QSIPGGAAARPFITHHNALD 232

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ + + 
Sbjct: 233 IPLY-LRIANELYLKRLIVGGFDGVYEFSRNFRNEGMDRTHNP-EFTAMEIYVAYKDYNW 290

Query: 249 ILNTMENVLRGV 260
           ++N  E +L  +
Sbjct: 291 MMNFTEQMLERI 302



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VMLL G ++++EV LFP
Sbjct: 462 RALEYGMPPTSGMGIGMDRLVMLLTGQESIQEVLLFP 498


>gi|171682464|ref|XP_001906175.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941191|emb|CAP66841.1| unnamed protein product [Podospora anserina S mat+]
          Length = 489

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 3/120 (2%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           R  + +  R  + A  F E   P L  ++ EG  +F      +Q +F A  Q+PQ YKQ 
Sbjct: 170 RMEMKHLFRSYLKARGFKEFEPPSLIGAASEGGSNFFRMPYFSQEAFLA--QSPQFYKQF 227

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEE 263
            +A G  R F IAP FR E+  + R   EF  LD+EM   +   ++L  +E VL  +F +
Sbjct: 228 EIAGGRKRVFSIAPVFRAENSNTPRHMTEFTGLDLEMEIRKDYSEVLYLLEGVLLYIFRQ 287


>gi|188575994|ref|YP_001912923.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|238689562|sp|B2SV97|SYK_XANOP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|188520446|gb|ACD58391.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 505

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 129/304 (42%), Gaps = 31/304 (10%)

Query: 5   RTHSCGDL-------------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL              +   G  V+++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPDALEASGRTVKMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  --ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
              N     +   K      ++ ++G  ++R+         TG++ + A  + +L+ +  
Sbjct: 101 LQGNVLGDAYTAFKGWDVGDIVAVEG-GLTRTK--------TGELSVKASALRLLTKSLR 151

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPI 168
            PLP           R++ R++DL      + + +KR++II +MR  + A  F+E  TP+
Sbjct: 152 -PLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPM 210

Query: 169 LTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +    P G  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   
Sbjct: 211 MH-YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVS 268

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +   P EF  L++  ++    +I++  E V+R   +       VS +   I    A RR+
Sbjct: 269 TRHNP-EFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFRRW 327

Query: 287 GTDK 290
             D+
Sbjct: 328 RMDE 331



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASG-----GIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-RAFQCGMP 534
           +++L  NG E+A+G        +  +    Q  +  G   E +   F   Y RA + GM 
Sbjct: 413 RFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMH--FDADYIRALEYGMA 470

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 471 PTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|269118661|ref|YP_003306838.1| lysyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268612539|gb|ACZ06907.1| lysyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 494

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 17/248 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVM 78
           + +G +   R  G   F  I+D  G  Q     D+     +EI K +     + I+G + 
Sbjct: 55  KTAGRIVAFRRMGKNGFGHIQDLSGKIQYYVKKDTVGEENYEIYKKLGVGDFIGIEGTLF 114

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
                       TG++ L A   E+LS     PLP           R++ R++DL   + 
Sbjct: 115 RTQ---------TGELTLRASSFEVLS-KNIRPLPEKFHGLTDVETRYRQRYVDLVMNND 164

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
           + +  + R +I+  +R  +  + F+E  TP+L   +    A+ F+         F+ L  
Sbjct: 165 VKETFITRFKILRFIRNFLENKGFLEVETPMLHPIAGGANAKPFITHHNALDMDFF-LRI 223

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF++ F+I   FR+E       P EF  L++  ++ + +DI+N  E +
Sbjct: 224 APELYLKRLLVGGFEKVFEINRSFRNEGTSIKHNP-EFTMLELYQAYADFEDIMNLTEEL 282

Query: 257 LRGVFEEF 264
           +  + EE 
Sbjct: 283 VSSLVEEL 290



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+ MLL  + ++R+V LFP
Sbjct: 449 RALEYGMPPAGGLGIGIDRLTMLLTDSFSIRDVLLFP 485


>gi|153853504|ref|ZP_01994884.1| hypothetical protein DORLON_00873 [Dorea longicatena DSM 13814]
 gi|149753659|gb|EDM63590.1| hypothetical protein DORLON_00873 [Dorea longicatena DSM 13814]
          Length = 610

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 128/284 (45%), Gaps = 32/284 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +I+D  G  QV    D+   E     +   +  I GL    
Sbjct: 28  VAIAGRMMFKRVMGKASFCNIQDLQGSIQVYVARDAIGTESYADFKRSDIGDIFGL---- 83

Query: 81  SAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
             E       TG+I + A+K+ +LS + + LP    G  +     R++ R++DL  +   
Sbjct: 84  --EGFAFRTRTGEISIHAEKMTLLSKSLQILPEKFHGLTD--TDTRYRQRYVDLIMNPES 139

Query: 140 K-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ-- 196
           K   +KR++I+  +R  +    F+E  TP+L +++   A      +R  +  + AL +  
Sbjct: 140 KETFIKRSKILKEIRNFLDGRGFMEVETPMLVSNAGGAA------ARPFETHYNALNEDV 193

Query: 197 ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
               + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++  
Sbjct: 194 KLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMEL 252

Query: 253 MENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
            E++ R + E+      +S N         F RI   DA+++Y 
Sbjct: 253 TESMFRYLAEKVCGSAVISYNGTVIDMAKPFERISMIDAVKKYA 296



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 29/41 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+VMLL  A+ +R+V LFP  ++ 
Sbjct: 422 ALEIGMPPTGGIGYGIDRLVMLLTDAQAIRDVLLFPTMKSL 462


>gi|325925183|ref|ZP_08186596.1| lysyl-tRNA synthetase (class II) [Xanthomonas perforans 91-118]
 gi|325544437|gb|EGD15807.1| lysyl-tRNA synthetase (class II) [Xanthomonas perforans 91-118]
          Length = 505

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 128/304 (42%), Gaps = 31/304 (10%)

Query: 5   RTHSCGDL-------------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL              +   G  VR++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPEALEASGRTVRMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  --ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
              N     +   K      ++ ++G  ++R+         TG++ + A  + +L+ +  
Sbjct: 101 LQGNVLGDAYTAFKGWDVGDIVAVEG-GLTRTK--------TGELSVKAGALRLLTKSLR 151

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPI 168
            PLP           R++ R++DL      + + +KR++II +MR  + A  F+E  TP+
Sbjct: 152 -PLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPM 210

Query: 169 LTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +    P G  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   
Sbjct: 211 MH-YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVS 268

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +   P EF  L++  ++     I++  E V+R   +       VS +   I    A RR+
Sbjct: 269 TRHNP-EFTMLELYEAYATYHQIMDLTEQVIRDTAQTVLGTTQVSWDGADIDLAPAFRRW 327

Query: 287 GTDK 290
             D+
Sbjct: 328 RMDE 331



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASG-----GIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-RAFQCGMP 534
           +++L  NG E+A+G        +  +    Q  +  G   E +   F   Y RA + GM 
Sbjct: 413 RFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMH--FDADYIRALEYGMA 470

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 471 PTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|325285592|ref|YP_004261382.1| Lysyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324321046|gb|ADY28511.1| Lysyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 563

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 17/252 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-G 75
           G  V +SG +   R  G   F +++D  G  QV  N D  C    K++ ++ +   +D G
Sbjct: 46  GKQVVISGRLMSRRIQGKASFAELQDGEGRVQVYFNRDEICTGDDKTLYNDVYKKLLDIG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP-------VFGEREYPESIRFK 127
            ++    +     +  G+  +  +K  ILS +   LPLP       VF E   PE +R++
Sbjct: 106 DIIGIEGDLFTTQV--GEKTVMVKKFTILSKSLRPLPLPKVDSEGKVFDEFNDPE-LRYR 162

Query: 128 YRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R+ DL  +   K + VKRT++ N+MR       + E  TPIL        AR F+    
Sbjct: 163 RRYADLVVNPHVKEVFVKRTKLFNAMRSFFNDAGYFEVETPILQPIPGGAAARPFITHHN 222

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +S+ +
Sbjct: 223 SLDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDKTHNP-EFTAMEIYVSYKD 280

Query: 246 QDDILNTMENVL 257
            + +++  E +L
Sbjct: 281 YNWMMDFCEKLL 292



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 456 RALEYGMPPTSGMGIGMDRLIMFLTNNQSIQEVLFFP 492


>gi|223985647|ref|ZP_03635696.1| hypothetical protein HOLDEFILI_03002 [Holdemania filiformis DSM
           12042]
 gi|223962391|gb|EEF66854.1| hypothetical protein HOLDEFILI_03002 [Holdemania filiformis DSM
           12042]
          Length = 403

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/330 (21%), Positives = 136/330 (41%), Gaps = 51/330 (15%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEI 61
           Y     G    +D   + +L GWV   R +G I F+++ D  ++   Q+V + D A F+ 
Sbjct: 11  YEMACSGSTMETDQIEYAQLQGWVRTNRNNGSIGFIELNDGTYFRNAQLVYSSDLANFQD 70

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQ----IELSAQKIEILSVAEELPLPVFGE 117
                +   L + G V           ++T Q     EL   ++ IL  A +   P+  +
Sbjct: 71  VSKYLTGTALTVTGKV-----------VLTPQAKQPFELQVTEV-ILEGACDNTYPLQKK 118

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPE 175
           R   E +R +   L  R +T   N V R R + +M      ++  F+  + PI+T +  E
Sbjct: 119 RHSFEYLR-EIGHLRPRSNTF--NAVFRVRSVLAMAIHEFFQDQGFVYVNAPIITGNDAE 175

Query: 176 GARDFLVPSRVNQGSF-------YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           GA +    +  + G++        A      Q +    A  F   +   P FR E+  + 
Sbjct: 176 GAGEVFTVTTRDDGNYEEDFFGKKANLTVSGQLQAEAFAMAFRDVYTFGPTFRAENSNTT 235

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLR--------------GVFEEFSN-------G 267
               EF+ ++ E++F + +D ++ +E++++                F +F +        
Sbjct: 236 THASEFWMVEPEIAFADLEDDMDLIEDMIKYCIQYVLDNCPEEMKFFNQFIDNTLLERLN 295

Query: 268 NTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           + +++ F+R+ Y +AI      K    NP+
Sbjct: 296 HVLNSEFVRMPYTEAIEHLLKAKKKFENPV 325


>gi|312371338|gb|EFR19556.1| hypothetical protein AND_22229 [Anopheles darlingi]
          Length = 1172

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 122/255 (47%), Gaps = 34/255 (13%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           + ++G VH +R   G +IF D+R      QV+AN        AK   SE       L M 
Sbjct: 697 LSVAGRVHAIRESSGKLIFYDLRGEGLKLQVMAN--------AKQYESEE------LFME 742

Query: 80  RSAETINANII----------TGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKY 128
            +A+    +II           G++ +  ++I++L+     LP   +G ++  +  RF+ 
Sbjct: 743 ETAKIRRGDIIGVTGVPGKTKKGELSVMPKRIKLLAPCLHMLPHLHYGLKD--KETRFRQ 800

Query: 129 RFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SR 185
           R+LDL  +   ++I + R++II+ +R       F+E  TP++   +    A+ F+   + 
Sbjct: 801 RYLDLMLNNNVRDIFIVRSKIISYVRRFFDQLGFLEVETPMMNMIAGGATAKPFITHHND 860

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           +N   F  +  AP+ Y ++L   G DR ++I   FR+E       P EF   +  M++ +
Sbjct: 861 LNMDLFLRI--APELYLKMLTVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYAD 917

Query: 246 QDDILNTMENVLRGV 260
            +DI+   + +L G+
Sbjct: 918 YNDIIEITQKLLSGM 932



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 22/36 (61%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + G+PP GG   GIDR  M L    N++EV LFP
Sbjct: 1107 ALEYGLPPTGGWGMGIDRFTMFLTDCNNIKEVLLFP 1142


>gi|294933203|ref|XP_002780649.1| lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239890583|gb|EER12444.1| lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 622

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 88/174 (50%), Gaps = 7/174 (4%)

Query: 92  GQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRII 149
           G++ +   +I +LS     LP   FG ++  + +RF+ R+LDL  +  + +   +R++II
Sbjct: 228 GELSIFPSEIRLLSTCMHMLPKAQFGLKD--QEVRFRQRYLDLIMNPHVRETFQRRSQII 285

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R  +    F+E  TP++   +    A+ F+          Y +  AP+ Y ++L+  
Sbjct: 286 GYIRSFLGNRGFMEVETPMMNMIAGGASAKPFITHHNELDLDLY-MRIAPELYLKMLVVG 344

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           G DR F+I   FR+E       P EF   +  M++ + +D++N  E ++ G+ +
Sbjct: 345 GLDRVFEIGKNFRNEGIDLTHNP-EFTSCEFYMAYADYNDLMNMTEEMISGMVK 397



 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   A + G+PP GG   G+DR+ M L    N++EV L+P
Sbjct: 564 GFVTALEYGLPPTGGWGLGVDRLCMFLTDNINIKEVILYP 603


>gi|197097424|ref|NP_001127155.1| lysyl-tRNA synthetase [Pongo abelii]
 gi|55725250|emb|CAH89490.1| hypothetical protein [Pongo abelii]
          Length = 625

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 154 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQ 213

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 214 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 262

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 263 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 321

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 322 LY-MRIAPELYHKILVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 379

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 380 EITEKMVSGMVKHITGSYKVT 400



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 564 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 599


>gi|260102344|ref|ZP_05752581.1| lysine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083853|gb|EEW67973.1| lysine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 516

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 118/259 (45%), Gaps = 23/259 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      + I K       L IDG V
Sbjct: 61  TKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYNIFKKSDIGDFLGIDGEV 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--R 134
           M            TG++ + A  +  LS A   LP    G ++  E+I ++ R+LDL   
Sbjct: 121 MKTD---------TGELTVRATHVTFLSKALRPLPDKYHGLKDV-EAI-YRQRYLDLITN 169

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
           RD+  +  V RT+II ++R  +  +NF+E  TP+L  + P G  AR F+          Y
Sbjct: 170 RDSYMR-FVHRTQIIQAIRDYLNKQNFLEVETPVL-HNIPGGAEARPFITHHNALDIDLY 227

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                    K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++ 
Sbjct: 228 MRIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDFHDVMDE 285

Query: 253 MENVLRGVFEEFSNGNTVS 271
            E ++R   +  S+   ++
Sbjct: 286 AEGIIRAAAKVVSDDGKIT 304



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 454 RAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 490


>gi|167768163|ref|ZP_02440216.1| hypothetical protein CLOSS21_02719 [Clostridium sp. SS2/1]
 gi|167709687|gb|EDS20266.1| hypothetical protein CLOSS21_02719 [Clostridium sp. SS2/1]
          Length = 646

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 135/298 (45%), Gaps = 37/298 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCID 74
           G  V ++G +   R  G   F +++D  G  Q     D      ++  K +    ++ I 
Sbjct: 53  GKEVAVAGRLMFKRVMGKASFCNVQDLQGGIQAYVARDEIGVESYQDFKKMDIGDIVGIK 112

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V +           TG+  + A+++ +LS + + PLP           R++ R++DL 
Sbjct: 113 GKVFATK---------TGEKSIHAEEVILLSKSLK-PLPEKFHGLTDTDTRYRQRYVDLI 162

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +   K + +KR++II+ +R  +  + F+E  TP+L  S+  GA      +R  +  + A
Sbjct: 163 MNEESKEVFIKRSKIISKIRSYLDGQGFMEVETPML-VSNAGGA-----SARPFETHYNA 216

Query: 194 LPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           L +      + + Y + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 217 LSEDVKLRISLELYLKRLIVGGLEKVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYH 275

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKPDLRN 295
            +++  EN+ R + EE   G  +            F RI   DA+++Y G D  +++ 
Sbjct: 276 GMMDLTENLYRYLAEEVCGGTKIQYKDFEIDLGKPFERITMVDAVKKYSGVDFKEIKT 333



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 28/41 (68%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++ 
Sbjct: 450 ALEIGMPPTGGIGFGIDRMVMLLTNSTAIRDVLLFPTMKSL 490


>gi|332529458|ref|ZP_08405417.1| lysyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332041104|gb|EGI77471.1| lysyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 512

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 121/245 (49%), Gaps = 15/245 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G   F  ++D  G  Q+    D+   E+  + +  W L   G +++  A
Sbjct: 75  VAGRMMLKRVMGKASFATLQDATGRIQLYVTRDAVGEEVYAAFK-HWDL---GDILA--A 128

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKN 141
           E       TG++ ++  +I +L+ +   P+P        + ++++ R++DL  D    K 
Sbjct: 129 EGTVFKTKTGELSINVSQIRLLTKSLR-PMPDKFHGMADQEMKYRQRYVDLITDEEARKR 187

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP-SRVNQGSFYALPQAP 198
              R++ ++S+R  M+   F+E  TP+L    P GA  + F+   + ++Q  F  +  AP
Sbjct: 188 FAARSKAVSSIRDYMVQNGFLEVETPMLH-PIPGGANAKPFVTHHNALDQEMFLRI--AP 244

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +  D++   E+++R
Sbjct: 245 ELYLKRLIVGGFERVFEINRSFRNEGI-SVRHNPEFTMMEFYAAYWDYQDLMTYTESLIR 303

Query: 259 GVFEE 263
            V ++
Sbjct: 304 HVAQK 308



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   G+DR++MLL  + ++R+V LFP
Sbjct: 470 RALEYGMPPTGGCGVGLDRLMMLLTDSPSIRDVILFP 506


>gi|325922146|ref|ZP_08183936.1| lysyl-tRNA synthetase (class II) [Xanthomonas gardneri ATCC 19865]
 gi|325547381|gb|EGD18445.1| lysyl-tRNA synthetase (class II) [Xanthomonas gardneri ATCC 19865]
          Length = 505

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 18/278 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75
           G  VR++G +   R  G   F  I+D  G  Q+    N     +   K      ++ ++G
Sbjct: 67  GRTVRMAGRLMAKRVMGKASFAQIQDESGRVQLFLQGNVLGDAYTAFKGWDVGDIVAVEG 126

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             ++R+         TG++ + A  + +L+ +   PLP           R++ R++DL  
Sbjct: 127 -GLTRTK--------TGELSVKATALRLLTKSLR-PLPDKWHGLSDVEQRYRQRYVDLIV 176

Query: 136 DTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
               + + +KR++II +MR  + A  F+E  TP++    P G  A+ F           Y
Sbjct: 177 TPEAREVFIKRSKIIRAMRAWLDARRFLEVETPMMH-YIPGGATAKPFTTHHNALDLDLY 235

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  G +R ++I   FR+E   +   P EF  L++  ++    +I++ 
Sbjct: 236 -LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRHNP-EFTMLELYEAYATYHEIMDL 293

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
            E V+R   +       V+ +   I    A RR+  D+
Sbjct: 294 TEQVIRDTAQSVLGTTQVNWDGADIDLAPAFRRWRMDE 331



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASG-----GIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-RAFQCGMP 534
           +++L  NG E+A+G        +  +    Q  +  G   E +   +   Y RA + GM 
Sbjct: 413 RFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMH--YDADYIRALEYGMA 470

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 471 PTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|302764308|ref|XP_002965575.1| hypothetical protein SELMODRAFT_84215 [Selaginella moellendorffii]
 gi|300166389|gb|EFJ32995.1| hypothetical protein SELMODRAFT_84215 [Selaginella moellendorffii]
          Length = 521

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 111/285 (38%), Gaps = 37/285 (12%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
            +LG    GS V + G VH  R  G + FL +R+     Q V +         ++V S+ 
Sbjct: 62  SELGTDLEGSTVLVRGRVHSKRAKGKMAFLVLRETIHTVQCVVS--------MENVGSKQ 113

Query: 70  VLCIDGLVMSRSAETINANI---------ITGQIELSAQKIEILSVA-EELPLPVFG--- 116
            +    L+   S   +  N+          T  +E+   ++  +S +  ELPL +     
Sbjct: 114 FVKYASLLSKESVVDVTGNVSNPRNPVSGTTQPVEIQVTELHCISRSTNELPLLLEDAAR 173

Query: 117 -----EREYPESI---------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFI 162
                E+   E I         R   R LDLR          ++ I +     + A  F 
Sbjct: 174 SDQDIEKAAKEGIQYARVLQDTRLNNRVLDLRIPANQAIFTVQSEISSLFHDFLRANKFR 233

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
           +  TP L A + EG          N      L Q+PQ +KQ+ +   F R F+I P FR 
Sbjct: 234 QIHTPKLIAGASEGGSAVFKLQYANDQP-ACLAQSPQLHKQMAICGDFRRVFEIGPVFRA 292

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSN 266
           E   + R   EF  LD EM   E   +I++ +  +   VF E + 
Sbjct: 293 EKSFTHRHLCEFIGLDFEMEIKEHYFEIIDLIGKLFIYVFNELNK 337



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 2/86 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H  +++L+      I    +         +F  G PPHGGI  
Sbjct: 434 FDVFIRGEEIISGAQRVHDKDLLLKRIEECNIDPNAIG--LQNYINSFSYGAPPHGGIGV 491

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G++R+ ML     N+R+VSLFP   N
Sbjct: 492 GLERVAMLFCNLDNIRKVSLFPRDPN 517


>gi|317499616|ref|ZP_07957878.1| lysyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893091|gb|EFV15311.1| lysyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 638

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 136/298 (45%), Gaps = 37/298 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCID 74
           G  V ++G +   R  G   F +++D  G  Q     D      ++  K +    ++ I 
Sbjct: 53  GKEVAVAGRLMFKRVMGKASFCNVQDLQGGIQAYVARDEIGVESYQDFKKMDIGDIVGIK 112

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V +           TG+  + A+++ +LS + + PLP           R++ R++DL 
Sbjct: 113 GKVFATK---------TGEKSIHAEEVILLSKSLK-PLPEKFHGLTDTDTRYRQRYVDLI 162

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +   K + +KR++II+ +R  +  + F+E  TP+L +++  GA      +R  +  + A
Sbjct: 163 MNEESKEVFIKRSKIISKIRSYLDGQGFMEVETPMLVSNAG-GA-----SARPFETHYNA 216

Query: 194 LPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           L +      + + Y + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 217 LSEDVKLRISLELYLKRLIVGGLEKVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYH 275

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKPDLRN 295
            +++  EN+ R + EE   G  +            F RI   DA+++Y G D  +++ 
Sbjct: 276 GMMDLTENLYRYLAEEVCGGTKIQYKDFEIDLGKPFERITMVDAVKKYSGVDFKEIKT 333



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 28/41 (68%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++ 
Sbjct: 450 ALEIGMPPTGGIGFGIDRMVMLLTNSTAIRDVLLFPTMKSL 490


>gi|304312853|ref|YP_003812451.1| Asparaginyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301798586|emb|CBL46816.1| Asparaginyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 473

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 113/287 (39%), Gaps = 36/287 (12%)

Query: 23  LSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           L+GWV   R   GG  F+ + D   +   QVV +   A +E         +L +      
Sbjct: 30  LAGWVRSRRDSKGGFSFVLLHDGSCFDGLQVVLDASLANYETE-------ILKLSAGCSI 82

Query: 80  RSAETINANIITGQI-ELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDT 137
           R +  + A+   GQ  EL A  +E+L   E+    P+  +R   E +R     L  R +T
Sbjct: 83  RVSGVLLASQGKGQAYELKADTLEVLGWVEDPESYPIAKKRHTLEYLR-SVAHLRPRTNT 141

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ- 196
                  R  +  ++     A  F   +TPI+TAS  EGA +     RV+   F  LP+ 
Sbjct: 142 FGAMARMRNSLSQAIHRYFDAHGFFWVNTPIITASDCEGAGEMF---RVSTLDFLKLPRN 198

Query: 197 APQQY---------KQLLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           A  Q          +  L  SG            R +   P FR E+  + R   EF+ +
Sbjct: 199 AAGQVDFSQDFFGKEAFLTVSGQLNGEAFCTALSRIYTFGPTFRAENSNTSRHLAEFWMV 258

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           + EM+F +   I +  E  L+ V  +  N       F    YD  +R
Sbjct: 259 EPEMAFADLATIADVAEAFLQSVVSDLLNARDADIAFFTEHYDKQLR 305


>gi|332221730|ref|XP_003260017.1| PREDICTED: lysyl-tRNA synthetase isoform 1 [Nomascus leucogenys]
          Length = 597

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 126 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQ 185

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 186 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 234

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 235 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 293

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 294 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 351

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 352 EITEKMVSGMVKHITGSYKVT 372



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 536 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 571


>gi|262282871|ref|ZP_06060638.1| asparaginyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262261123|gb|EEY79822.1| asparaginyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 448

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 112/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F+  K +
Sbjct: 15  VGKEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  + + P+     +E+     
Sbjct: 75  SQETSVFVTGIVKEDERSKFG-------YELDITDIEVIGESNDYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 239 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAI 295



 Score = 41.6 bits (96), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++   +++G+  +  E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREEDYDALVAKMNDLGM--DTTEYEFYLDLRKY--GTVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|194397060|ref|YP_002038174.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|194356727|gb|ACF55175.1| asparaginyl-tRNA synthetase (asnS) [Streptococcus pneumoniae G54]
          Length = 447

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 110/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  ++  P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQXYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAI 283
           ++  D+ L+  E  ++   +   +                   ++  F RI YD AI
Sbjct: 238 YLTHDESLDLQEAYVKAXXQGVXDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 363 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 418

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 419 IERMVTFAAGTKHIREAIPFP 439


>gi|332030530|gb|EGI70218.1| Lysyl-tRNA synthetase [Acromyrmex echinatior]
          Length = 651

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 114/249 (45%), Gaps = 26/249 (10%)

Query: 23  LSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP------DSACFEIAKSVRSEWVLCIDG 75
           ++G VH +R  G  +IF D+R      QV+AN       +    + AK  R + +  +  
Sbjct: 182 VAGRVHSIRGSGAKLIFYDLRGEGVKVQVMANARLYENEEKFVADTAKIKRGDIIGVVGK 241

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL- 133
              S+           G+  +  + I +LS     LP   FG ++     RF+ R+LDL 
Sbjct: 242 PAKSKK----------GEFSIVPRSITLLSPCLHMLPHLYFGLKD--RETRFRQRYLDLI 289

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSF 191
             D + +    R +I+  +R  +    F+E  TP++   +    A+ F+   + +N   F
Sbjct: 290 LNDKVRQIFHIRAKIVAYVRKFLDNMGFLEVETPMMNMIAGGATAKPFITHHNELNMDLF 349

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++ 
Sbjct: 350 MRI--APELYHKMLVVGGIDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYMAYADYNDLME 406

Query: 252 TMENVLRGV 260
             EN++ G+
Sbjct: 407 ITENMVSGM 415



 Score = 41.2 bits (95), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV  FP
Sbjct: 590 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLFFP 625


>gi|317472903|ref|ZP_07932209.1| lysyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316899623|gb|EFV21631.1| lysyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 637

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 131/290 (45%), Gaps = 38/290 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCID 74
           G  V ++G +   R  G   F +I+D  G  Q     D    E  K  +   +   + I 
Sbjct: 53  GKEVSVAGRMMFKRVMGKASFCNIQDLEGRIQAYVARDEIGVEEYKDFKKMDIGDIIGIK 112

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
           G V             TG+  + A+++ +LS + + LP    G ++     R++ R++DL
Sbjct: 113 GTVFVTK---------TGEKSIHAKEVVLLSKSLKPLPEKFHGLKDT--DARYRQRYVDL 161

Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   K+  +KR++II+ +R  +  + F+E  TP+L  ++   A      +R  +  + 
Sbjct: 162 IMNEESKDTFIKRSKIISKIRSFLDGQGFMEVETPMLVPNAGGAA------ARPFETHYN 215

Query: 193 ALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           AL +      + + Y + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + 
Sbjct: 216 ALDEDVKLRISLELYLKRLIVGGLEKVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDY 274

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           + ++   EN+ R + +E     T++ N         F +I   DA+++Y 
Sbjct: 275 NGMMELTENLYRYLAQEVVGSTTITYNGIEMDLGKPFEKITMVDAVKKYA 324



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 28/41 (68%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++ 
Sbjct: 450 ALEIGMPPTGGIGFGIDRMVMLLTDSSAIRDVLLFPTMKSL 490


>gi|213621106|ref|ZP_03373889.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 125

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 1/123 (0%)

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
           QDGD  FF A +           R  + ++L + + + +   W++DFP +E ++ E  + 
Sbjct: 1   QDGDMIFFGADNKKVVADALGALRLKLGKDLSLTDEDKWAPLWVIDFPMFE-DDGEGGLT 59

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
             H+PFT P+    S          A  YD+V NG+E+  G +R H  E+    F  +GI
Sbjct: 60  AMHHPFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGI 119

Query: 514 SKE 516
           +++
Sbjct: 120 NEQ 122


>gi|187478019|ref|YP_786043.1| lysyl-tRNA synthetase [Bordetella avium 197N]
 gi|115422605|emb|CAJ49130.1| lysyl-tRNA synthetase [Bordetella avium 197N]
          Length = 504

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 115/250 (46%), Gaps = 21/250 (8%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VL 71
           D    V+++G +   R  G   F  ++D  G  Q+     S   E+  + + +W    ++
Sbjct: 59  DAAVRVKVAGRMMLKRVMGKASFATLQDGSGRIQLYLERGSLGEEVYAAFK-QWDIGDII 117

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I+G +   +          G++ + A    +LS +   PLP        + +R++ R++
Sbjct: 118 AIEGTMFKTN---------KGELSVHATSARLLSKSLR-PLPDKFHGVSDQELRYRQRYV 167

Query: 132 DL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQ 188
           DL   D+  +    R++ I  +R  M+A +F+E  TP+L    P GA  + F+       
Sbjct: 168 DLIMTDSTRRTFEARSKAIGGIRQAMLAADFLEVETPMLH-PIPGGAAAKPFVTHHNALD 226

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++   ++ E   
Sbjct: 227 MEMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYAEYRW 284

Query: 249 ILNTMENVLR 258
           I++  E+++R
Sbjct: 285 IMDFTESLIR 294



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F     +K+  +     F   Y RA + GMPP 
Sbjct: 412 RFELFITGREIANGFSELNDPEDQAARFQAQVEAKDAGDEEAMYFDADYIRALEYGMPPT 471

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 472 GGCGIGIDRLVMLLTDSPSIRDVILFP 498


>gi|90579832|ref|ZP_01235640.1| lysyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438717|gb|EAS63900.1| lysyl-tRNA synthetase [Vibrio angustum S14]
          Length = 501

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 127/265 (47%), Gaps = 25/265 (9%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ ++D  G  QV AN      ++ + +++++     G ++    +   ++   G++ ++
Sbjct: 77  FMVLQDVSGRIQVYANK-----QVQEELKAKYHSLDIGDIIGVKGQVHRSD--RGELYVN 129

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRM 156
             + E+ + A   PLP        +  R++ R++DL  +   +N ++ R++++ ++R  M
Sbjct: 130 MDEYELQTKALR-PLPEKFHGLTDQEQRYRQRYVDLIINEESRNTMIMRSKVVAAIRQFM 188

Query: 157 IAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +   F+E  TP++   +    AR F+          Y L  AP+ Y + L+  GF+R F+
Sbjct: 189 LKHQFMEVETPMMHPIAGGASARPFITHHNALDIDMY-LRIAPELYLKRLVVGGFERVFE 247

Query: 216 IAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV--- 270
           I   FR+E   PR +    EF  ++  M++ + +D+++  E++L  V +E      +   
Sbjct: 248 INRNFRNEGISPRHN---PEFTMMEFYMAYADYNDLIDFTEDLLSSVAKELCGTTALPYG 304

Query: 271 ------SNNFLRICYDDAIRRYGTD 289
                 S  + R+   +AI+ Y  D
Sbjct: 305 EHVIEFSGPYTRVTMLEAIQHYNPD 329



 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VML   +  +R+V LFP
Sbjct: 459 RALEFGLPPTAGQGIGIDRLVMLFTDSHTIRDVILFP 495


>gi|218190024|gb|EEC72451.1| hypothetical protein OsI_05793 [Oryza sativa Indica Group]
          Length = 490

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H+ EV+ +     GI              AF+ G PPHGG   
Sbjct: 405 FDVFVRGEEIISGAQRVHVPEVLARQAEERGIDV----GSIAAYVDAFRYGAPPHGGFGV 460

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML  G  N+R+ SLFP
Sbjct: 461 GLERVVMLFCGLGNIRKASLFP 482



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 93/241 (38%), Gaps = 31/241 (12%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP--------DSACFEIA 62
           LG    G  VR+ G  H VR  G  + FL +R      Q V           D+     A
Sbjct: 48  LGPDVAGRAVRVRGAAHAVRAVGRRVAFLVLRQGSSTVQCVVGGGGGGGGGGDAGVARFA 107

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYP 121
             +  E V+ + G+V S   E +       ++E+  +K+  +S A   LP+ V       
Sbjct: 108 AGLSRESVVDVAGVV-SLPREPVRGTT-QQEVEIQVKKLYCISKATPNLPISVDDAARSE 165

Query: 122 ESI-----------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           E +                 R  +R +DLR          +  I N  R  +++E F+  
Sbjct: 166 EDVVKAKAAGEQLVHVGQDKRLDFRVIDLRTPANQAIFRVQCEIENIFRQVLLSEGFVGI 225

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP L   S EG            G    L Q+PQ +KQ+ +  GF+R F++ PC   + 
Sbjct: 226 HTPKLIGGSSEGGAAVF--KLDYNGQPACLAQSPQLHKQMAICGGFERVFEVGPCPAQKT 283

Query: 225 P 225
           P
Sbjct: 284 P 284


>gi|119897778|ref|YP_932991.1| lysyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|166229792|sp|A1K5J9|SYK_AZOSB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|119670191|emb|CAL94104.1| lysyl-tRNA synthetase [Azoarcus sp. BH72]
          Length = 500

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 122/282 (43%), Gaps = 30/282 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR----SEWVLCIDGL 76
           VR++G V   R  G   F+ I+D  G  Q+    D    ++    +     + V C+  L
Sbjct: 66  VRVAGRVMLKRVMGKASFITIQDLSGRIQLYVQRDGVGEDVYADFKHWDIGDIVGCVGTL 125

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-R 134
             ++          TG++ + A +I +L+ +   LP    G  +  +  +++ R+LDL  
Sbjct: 126 FKTK----------TGELTVKASEIRLLTKSLRPLPDKFHGLTDVEQ--KYRQRYLDLIM 173

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
            +      V R+R++ S+R  MI   F+E  TP++        A+ F+          + 
Sbjct: 174 SEQTRFTFVARSRMVQSIRNYMINHGFLEVETPMMHPIPGGAAAKPFVTHHNALDMELF- 232

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  G ++ F++   FR+E   S R   EF  ++   ++ +   ++N  
Sbjct: 233 LRIAPELYLKRLVVGGLEKVFEVNRNFRNEG-LSPRHNPEFTMMEFYEAYADYRSLMNFT 291

Query: 254 ENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRRY 286
           E ++R    E     +         +S  F R+    AIR+Y
Sbjct: 292 EGLIRQAAREALGAESFVYQGRELDLSKPFHRLTIVQAIRKY 333



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F     +KE  +     +   Y RA + G+PP 
Sbjct: 409 RFELFIVGREIANGFSELNDPEDQAARFLAQAQAKEAGDEEAMYYDADYIRALEFGLPPT 468

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 469 GGCGIGIDRLVMLLTDSASIRDVILFP 495


>gi|328861275|gb|EGG10379.1| hypothetical protein MELLADRAFT_51822 [Melampsora larici-populina
           98AG31]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 109/245 (44%), Gaps = 21/245 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR+ GW+HR+R   G+IFL +RD  G  Q V     A    A ++  E  + + G +++ 
Sbjct: 142 VRVFGWIHRLRQQKGLIFLVLRDGTGFLQCVLTGKLAQTYDALTLTIESTVQLTGKIVA- 200

Query: 81  SAETINANIITGQIELSAQKIEI--LSVAEELP------LPVFGEREYPESIRFKYRFLD 132
                   +  G+      ++++   S+  + P           E   P+++  + R L 
Sbjct: 201 --------LPEGKSAPDGHELQVDWWSIMGKAPGDSESFTNQISEDSGPDTLADR-RHLV 251

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +T    +  R+ ++++ R      + IE + P +  +  EG           + ++ 
Sbjct: 252 LRGETASSVLKVRSALLDAFRQSYAKLSLIEVTPPCMVQTQVEGGSTLFAFDYYGEKAY- 310

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  + S  D  F I   FR E  R+ R   E+  L+ E+ F+  +D+L+ 
Sbjct: 311 -LTQSSQLYLETCLPSLGD-CFCIQESFRAEKSRTRRHLSEYTHLEAELGFLTFEDLLSH 368

Query: 253 MENVL 257
           +E ++
Sbjct: 369 IEELI 373


>gi|294874358|ref|XP_002766916.1| lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239868291|gb|EEQ99633.1| lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 585

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 7/172 (4%)

Query: 92  GQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRII 149
           G++ +   +I +LS     LP   FG ++  + +RF+ R+LDL  +  + +   +R++II
Sbjct: 193 GELSIFPSEIRLLSTCMHMLPKAQFGLKD--QEVRFRQRYLDLIMNPHVRETFQRRSQII 250

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R  +    F+E  TP++   +    A+ F+          Y +  AP+ Y ++L+  
Sbjct: 251 GYIRSYLGNRGFMEVETPMMNMIAGGASAKPFITHHNELDLDLY-MRIAPELYLKMLVVG 309

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           G DR F+I   FR+E       P EF   +  M++ + +D++N  E ++ G+
Sbjct: 310 GLDRVFEIGKNFRNEGIDLTHNP-EFTSCEFYMAYADYNDLMNMTEEMISGM 360



 Score = 40.4 bits (93), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 6/81 (7%)

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV--VENRFGGLYRAFQCGMPPHGGIAAG 542
           +CN +   +  ++  ++    QA +      E   V+N F     A + G+PP GG   G
Sbjct: 492 ICNAYTELNDPVK-QLACFTAQAQAKAAGDDEACDVDNSF---VTALEYGLPPTGGWGLG 547

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           +DR+ M L    N++EV L+P
Sbjct: 548 VDRLCMFLTDNINIKEVILYP 568


>gi|195481726|ref|XP_002101754.1| GE15441 [Drosophila yakuba]
 gi|194189278|gb|EDX02862.1| GE15441 [Drosophila yakuba]
          Length = 580

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 20/248 (8%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           + ++G VH +R  G  +IF D+R      QV+A+        AKS +SE     D   + 
Sbjct: 110 LSVAGRVHAIRESGAKLIFYDLRGEGVKVQVMAS--------AKSYKSEADFETDTAKLR 161

Query: 80  RSAETIN-----ANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           R  + I           G++ +   +I++LS     LP   FG ++  +  R++ R+LDL
Sbjct: 162 R-GDIIGVIGHPGKTKKGELSVMPSEIKLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 218

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
              + + +N   R +II+ +R  +    F+E  TP++   +        V    +     
Sbjct: 219 ILNNKVRENFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNDLKMDL 278

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  DI++ 
Sbjct: 279 FMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYADIMDI 337

Query: 253 MENVLRGV 260
            E ++ G+
Sbjct: 338 TEQLVSGM 345



 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 520 SLEYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFP 555


>gi|315644404|ref|ZP_07897544.1| lysyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315280281|gb|EFU43573.1| lysyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 503

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 118/257 (45%), Gaps = 19/257 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77
           V L+G +   R  G   F  I+D  G  Q+    DS   A +E    +    ++ + G++
Sbjct: 68  VNLAGRIMAKRGMGKASFAHIQDLSGRVQIYVRQDSVAEAQYEAFSILDLGDIIGVKGVL 127

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
                        TG+  +  +++E+LS +   LP    G ++    +R++ R++DL  +
Sbjct: 128 FKTK---------TGETTVKVKELEVLSKSLYPLPEKFHGLKDV--ELRYRQRYVDLIIN 176

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
             + K  + R+RII SMR  + +  ++E  TP L + +    AR F+          Y +
Sbjct: 177 PDVQKTFITRSRIIQSMRRYLDSLGYLEVETPTLHSIAGGAAARPFITHHNALDMELY-M 235

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G ++ ++I   +R+E   +   P EF  +++  ++ +  DI+   E
Sbjct: 236 RIAIELHLKRLIVGGLEKVYEIGRVYRNEGISTRHNP-EFTMIELYEAYADYKDIMALTE 294

Query: 255 NVLRGVFEEFSNGNTVS 271
           N++  + +E      +S
Sbjct: 295 NLIAHIAQEVLGTQVIS 311



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 30/41 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           RA + GMPP GG+  GIDR++MLL  A ++R+V LFP  +N
Sbjct: 461 RALEYGMPPTGGLGIGIDRLIMLLTNAPSIRDVLLFPHMRN 501


>gi|237736851|ref|ZP_04567332.1| lysyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229420713|gb|EEO35760.1| lysyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 493

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 121/274 (44%), Gaps = 19/274 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLVM 78
           + +G +   R  G   F+ I D  G  QV    D      + + K +    ++ ++G + 
Sbjct: 57  KTAGRIMAYRGKGKTAFVHIEDISGKIQVYLRQDELGEENYALVKKIGVGDIIGVEGTLF 116

Query: 79  SRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRFLDL-RRD 136
             S         TG++ + A  + +L      LP    G  +     R++ R++DL    
Sbjct: 117 LTS---------TGELTIRASVVTLLCKNIRSLPEKFHGLTDV--ETRYRKRYVDLIMNK 165

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
            +    VKRT+II+++R  +  + F+E  TP++        AR F+          Y L 
Sbjct: 166 DVRDTFVKRTKIISAIRRILDGKGFLEVETPLMHPILGGAAARPFITHHNTLDIDLY-LR 224

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G ++ +++   FR+E   +   P EF  ++M  ++ +  D+++  E 
Sbjct: 225 IAPELYLKRLIIGGMEKVYELGRNFRNEGMSTRHNP-EFTMIEMYQAYADYTDMMDLAEE 283

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
           ++  + ++    +T++ N   I  ++  R +  D
Sbjct: 284 IISTLAKDVLGTSTITYNGKEIVLENFKRIHMVD 317



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR++MLL  ++++R+V  FP
Sbjct: 452 ALEYGLPPTGGMGIGIDRLIMLLTNSESIRDVLYFP 487


>gi|296478235|gb|DAA20350.1| lysyl-tRNA synthetase [Bos taurus]
          Length = 623

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 152 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIRINNKLRRGDIIGVQ 211

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 212 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 260

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 261 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 319

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 320 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 377

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 378 EITEKMISGMVKHITGSYKVT 398



 Score = 45.1 bits (105), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 562 ALEYGLPPTGGWGMGIDRVTMFLTDSNNIKEVLLFP 597


>gi|319942464|ref|ZP_08016776.1| lysyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804013|gb|EFW00926.1| lysyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 505

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 19/267 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77
           V  +G V   R  G + F  +RD+ G  Q      +   A +   K++    ++  +G +
Sbjct: 67  VACAGRVMLKRVMGRLTFATVRDYTGTMQYFVQESTVGEAAYADFKTLDLGDIVACEGTL 126

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           M   A  +   + +    L A+ +         P+P   +    +   ++ R++DL  + 
Sbjct: 127 MRTQAGDLAIKVTS--FRLMAKSLR--------PMPDKHKGLQDQEFCYRRRYVDLMVNA 176

Query: 138 LHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYAL 194
             +   +KR++ I S+R  M+A +F+E  TP+L    P G  AR F+          Y L
Sbjct: 177 ESRERFIKRSKAIASIRNFMLANDFLEVETPML-HPIPGGANARPFITHHNALNTEMY-L 234

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   ++    D +   E
Sbjct: 235 RIAPELYLKRLVVGGFERVFEINRNFRNEGIDARHNP-EFTMMEFYATYWTYKDQMEFTE 293

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDD 281
            +LR V  E +    V+   + I +++
Sbjct: 294 ALLRHVAREVTGSAIVTYQGMTINFEE 320



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR +MLL  A  +R+V LFP
Sbjct: 462 ALEYGLPPTAGCGIGIDRFMMLLTDAPTIRDVLLFP 497


>gi|195392834|ref|XP_002055059.1| GJ19167 [Drosophila virilis]
 gi|194149569|gb|EDW65260.1| GJ19167 [Drosophila virilis]
          Length = 580

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 120/249 (48%), Gaps = 22/249 (8%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           + ++G +H +R  G  +IF D+R      QV+A+        AKS +SE    +D   + 
Sbjct: 111 LSVAGRIHAIRESGAKLIFYDLRGEGVKLQVMAS--------AKSYKSEKAFELDTAKLR 162

Query: 80  RSAETINAN-----IITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           R  + I  N        G++ +   ++++LS     LP   FG ++  +  R++ R+LDL
Sbjct: 163 R-GDIIGVNGHPGKTKKGELSIMPTELKLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 219

Query: 134 RRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             ++ + +N   R +II+ +R  +    F+E  TP++   +    A+ F+      +   
Sbjct: 220 ILNSKVRENFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNELKMDL 279

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++ 
Sbjct: 280 F-MRIAPELYHKMLVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYMAYADYYDLIE 337

Query: 252 TMENVLRGV 260
             E ++ G+
Sbjct: 338 ITEQMISGM 346



 Score = 44.7 bits (104), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 521 ALEYGLPPTGGWGMGIDRLTMFLTDSNNIKEVLLFP 556


>gi|55741637|ref|NP_001006968.1| lysyl-tRNA synthetase [Rattus norvegicus]
 gi|53733461|gb|AAH83652.1| Lysyl-tRNA synthetase [Rattus norvegicus]
 gi|149038242|gb|EDL92602.1| lysyl-tRNA synthetase, isoform CRA_b [Rattus norvegicus]
          Length = 626

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 120/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ ++
Sbjct: 155 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVE 214

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +  +++ +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 215 G---------NPGKTKKGELSIVPREMTLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 263

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 264 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 322

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 323 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 380

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E +L G+    +    ++
Sbjct: 381 EITEKMLSGMVRSITGSYKIT 401



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 565 ALEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFP 600


>gi|281425342|ref|ZP_06256255.1| asparagine--tRNA ligase [Prevotella oris F0302]
 gi|281400505|gb|EFB31336.1| asparagine--tRNA ligase [Prevotella oris F0302]
          Length = 463

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 34/268 (12%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69
           L  ++ G  + + GWV   R    + F+ + D   I   Q+V +P S   E  K++ +  
Sbjct: 10  LQCTEYGKDINVKGWVRSHRSSKAVDFIALNDGSTINNIQIVVDPASMDAETLKNITTGA 69

Query: 70  VLCIDG-LVMSRSAETINANIITGQ-IELSAQKIEILSVA-EELPLPVFGER-EYPESIR 125
            + + G LV S+ A         GQ +E+ +++IEI  +   + P+   G+  EY     
Sbjct: 70  CISVVGQLVKSQGA---------GQTVEIQSKEIEIYGLCPSDYPMQKKGQSFEYMR--- 117

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            KY  L LR +T       R  +  ++        F    TP++TAS  EGA +    + 
Sbjct: 118 -KYAHLRLRTNTFGAVFRIRHNMAIAVHKYFHDHGFYYFHTPLITASDAEGAGEMFQVTT 176

Query: 186 VN------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRL 230
           ++            +  F+    +     QL   L A+     +   P FR E+  + R 
Sbjct: 177 LDLARTGKDGEVPYERDFFGKKTSLTVSGQLEGELGATALGAIYTFGPTFRAENSNTPRH 236

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLR 258
             EF+ ++ E++F+++D++++  E+ ++
Sbjct: 237 LAEFWMIEPEVAFLDKDELMDLEEDFIK 264


>gi|78047472|ref|YP_363647.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|123771380|sp|Q3BUB6|SYK_XANC5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78035902|emb|CAJ23593.1| lysyl-tRNA synthetase heat inducible [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 505

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 128/304 (42%), Gaps = 31/304 (10%)

Query: 5   RTHSCGDL-------------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL              +   G  VR++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPEALEASGRTVRMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  --ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
              N     +   K      ++ ++G  ++R+         TG++ + A  + +L+ +  
Sbjct: 101 LQGNVLGDAYTAFKGWDVGDIVAVEG-GLTRTK--------TGELSVKAGALRLLTKSLR 151

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPI 168
            PLP           R++ R++DL      + + +KR++II +MR  + A  F+E  TP+
Sbjct: 152 -PLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPM 210

Query: 169 LTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +    P G  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   
Sbjct: 211 M-HYIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVS 268

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +   P EF  L++  ++     I++  E V+R   +       VS +   I    A RR+
Sbjct: 269 TRHNP-EFTMLELYEAYATYHQIMDLTEQVIRDTAQTVLGTTQVSWDGADIDLAPAFRRW 327

Query: 287 GTDK 290
             D+
Sbjct: 328 RMDE 331



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASG-----GIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-RAFQCGMP 534
           +++L  NG E+A+G        +  +    Q  +  G   E +   F   Y RA + GM 
Sbjct: 413 RFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMH--FDADYIRALEYGMA 470

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 471 PTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|34541056|ref|NP_905535.1| lysyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|39932028|sp|Q7MUV7|SYK_PORGI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|34397371|gb|AAQ66434.1| lysyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 578

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 117/253 (46%), Gaps = 20/253 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL-CID-GLVM 78
           V ++G +   R  G   F++++D  G  Q+    D  C    K   +  V  C D G  +
Sbjct: 57  VSIAGRIMSRRIMGKATFMELQDAEGRIQIYITRDDICPGEDKEFYNTVVKKCTDIGDFI 116

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYRF 130
                     +  G+I +  Q++  LS A   PLPV  E++         PE  R++ R+
Sbjct: 117 GVKGYVFRTQM--GEISVHVQEMTFLSKAIR-PLPVVKEKDGEVFDGFTDPEQ-RYRQRY 172

Query: 131 LDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVN 187
           +DL  ++  K+I +KRT + NSMR       +IE  TP+L  S P G  AR F+      
Sbjct: 173 VDLVVNSHVKDIFLKRTMVFNSMRSFFNECGYIEVDTPVL-QSIPGGAAARPFITHHNAL 231

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ + +
Sbjct: 232 DIPLY-LRIANELYLKRLIVGGFDGVYEFSRNFRNEGMDRTHNP-EFTAMEIYVAYKDYN 289

Query: 248 DILNTMENVLRGV 260
            ++N  E +L  +
Sbjct: 290 WMMNFTEQMLERI 302



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VMLL G ++++EV LFP
Sbjct: 462 RALEYGMPPTSGMGIGMDRLVMLLTGQESIQEVLLFP 498


>gi|322694644|gb|EFY86468.1| lysyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 567

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 127/260 (48%), Gaps = 17/260 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDS------ACFEIAKSV 65
           G +D    ++L+G ++  R  G  + F DIR      QV+A  D+      +  E   ++
Sbjct: 100 GETDKSRMIQLAGRIYVRRSAGSKLFFYDIRSDGTRLQVLAQADNLDDKAPSFDEQHVNL 159

Query: 66  RSEWVLCIDGLVMSRSAETINAN-IITGQIELSAQKIEILS-VAEELPLPVFGEREYPES 123
           R   ++ I G     + +T   +   +G++ ++A +I +LS    ++P   +G +  PE+
Sbjct: 160 RRGDIIGIRGFPTRTNPKTKQGSGEYSGELSIAAVEITLLSPCLHQIPDDHYGFKN-PET 218

Query: 124 IRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            RF+ R+LDL  +   + I + R ++ + +R      +F+   TP+L   +    AR F+
Sbjct: 219 -RFRQRYLDLMMNEKSRQIFITRAKVDSYIRRWFDERDFVSVQTPMLNPIAGGATARPFI 277

Query: 182 VP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              + +N   F  L  AP+ Y ++L+  G +R +++   FR+E       P EF  L+  
Sbjct: 278 THHNDLNMDMF--LRVAPELYLKMLVVGGLNRVYEMGRQFRNESMDLTHNP-EFTTLEFY 334

Query: 241 MSFVEQDDILNTMENVLRGV 260
           M++ +  D++   E ++ G+
Sbjct: 335 MAYADVYDLMTMTEELVSGL 354


>gi|22328958|ref|NP_194417.2| aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase,
           putative [Arabidopsis thaliana]
 gi|24030349|gb|AAN41339.1| putative aspartate-tRNA ligase [Arabidopsis thaliana]
 gi|332659863|gb|AEE85263.1| aspartyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 532

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H  E++ +     GI  + +         AF+ G PPHGG   
Sbjct: 447 FDVFIRGEEIMSGAQRIHDPELLEKRARECGIDVKTISTYID----AFRYGAPPHGGFGV 502

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VMLL    N+R+ SLFP
Sbjct: 503 GLERVVMLLCALNNIRKTSLFP 524



 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 28/247 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCI 73
           VGS V + G +H+ R  G  +F+ +R+     Q V       +   +  K +  E V+ +
Sbjct: 84  VGSEVSIRGRLHKNRLVGTKLFVILRESGFTVQCVVEETRVGANMIKFVKQLSRESVVEL 143

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPV----FGEREYPES----- 123
            G+V S   + +     T Q+E+  +K+  LS +   LPL V      E +  +S     
Sbjct: 144 IGVV-SHPKKPLTGT--TQQVEIHVRKMYCLSRSLPNLPLVVEDAARSESDIEKSGKDGK 200

Query: 124 --------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                    R   R LD+R          + ++  + R  + ++ F+E  TP L A S E
Sbjct: 201 QAARVLQDTRLNNRVLDIRTPANQAIFRIQCQVQIAFREYLQSKGFLEIHTPKLIAGSSE 260

Query: 176 GARDFLVPSRVN-QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           G        R++ +G    L Q+PQ +KQ+ +     R F++ P FR ED  + R   EF
Sbjct: 261 GGSAVF---RLDYKGQPACLAQSPQLHKQMAICGDMRRVFEVGPVFRAEDSFTHRHLCEF 317

Query: 235 YQLDMEM 241
             LD+EM
Sbjct: 318 VGLDVEM 324


>gi|326500930|dbj|BAJ95131.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 285

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 3/145 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R  YR +D+R             + N  R  + ++NFI   TP L   S EG     
Sbjct: 49  QDTRLNYRPIDIRTPANLSTFSIEHHVENKFREFLFSKNFIGIHTPKLIGGSSEGGASVF 108

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 Q +   L Q+PQ YKQ+ +  GF R F++   FR E   + R   EF  LD EM
Sbjct: 109 KLDYNGQPA--CLAQSPQLYKQMAICGGFGRVFEVGSIFRAEKSNTHRHLCEFIGLDAEM 166

Query: 242 SFVEQD-DILNTMENVLRGVFEEFS 265
              E   ++ + ++ +   +F+  +
Sbjct: 167 EIKEHYFEVCDIIDGLFVAIFDHLN 191


>gi|77735669|ref|NP_001029528.1| lysyl-tRNA synthetase [Bos taurus]
 gi|74354788|gb|AAI02323.1| Lysyl-tRNA synthetase [Bos taurus]
          Length = 623

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 152 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIRINNKLRRGDIIGVQ 211

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 212 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 260

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 261 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 319

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 320 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 377

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 378 EITEKMISGMVKHITGSYKVT 398



 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 562 ALEYGLPPTGGWGMGIDRVTMFLTDSNNIKEVLLFP 597


>gi|311693659|gb|ADP96532.1| lysyl-tRNA synthetase [marine bacterium HP15]
          Length = 511

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 25/204 (12%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP   +       R+++R++DL  +   + +   R++II++MR      +F+E  TP+L
Sbjct: 140 PLPEKHKGLTDTEARYRHRYVDLMVNEDSRRVFYARSKIISAMRQYFTDRDFMEVETPML 199

Query: 170 TASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
               P GA  R F+          Y L  AP+ + + L+  GF+R F+I   FR+E   +
Sbjct: 200 QVI-PGGATARPFVTHHNALGIDMY-LRIAPELFLKRLVVGGFERVFEINRNFRNEGLST 257

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-------------- 273
              P EF  ++   ++ + +D+++  E++LR + ++     TV N+              
Sbjct: 258 RHNP-EFTMVEFYQAYADYNDLMDLTEDMLRTITQKVLGTTTVVNSRTLADGSEETVEYD 316

Query: 274 ----FLRICYDDAIRRYGTD-KPD 292
               F R+   DAI RY  D KP+
Sbjct: 317 FGKTFERLTVVDAILRYNPDIKPE 340



 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ MLL  + ++R+V LFP
Sbjct: 461 ALEYGLPPTAGEGIGIDRLAMLLTNSPSIRDVILFP 496


>gi|91794476|ref|YP_564127.1| lysyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123060626|sp|Q12JH2|SYK_SHEDO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|91716478|gb|ABE56404.1| lysyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 500

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 91/182 (50%), Gaps = 15/182 (8%)

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--------RFKYRFLDLRRDTLHKN 141
           + GQ+ LS  K ++    EE  L     R  PE          R++ R++DL  +   +N
Sbjct: 113 VKGQLHLSG-KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRN 171

Query: 142 -IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
             + R+++++++R  MI + F+E  TP++    P GA  R F+        + Y L  AP
Sbjct: 172 AFIMRSKVVSAIRNFMIKKEFMEVETPMMHVI-PGGASARPFVTHHNALDMAMY-LRIAP 229

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L 
Sbjct: 230 ELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYQDLMDLTEEMLS 288

Query: 259 GV 260
            +
Sbjct: 289 SI 290



 Score = 41.2 bits (95), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 459 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|183234212|ref|XP_650600.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
 gi|169801208|gb|EAL45214.2| hypothetical protein EHI_047810 [Entamoeba histolytica HM-1:IMSS]
          Length = 769

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 4/150 (2%)

Query: 122 ESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           +  RF+ R+LDL  +    KN V RT+++ ++R  +  + F+E  TPIL T      AR 
Sbjct: 151 QETRFRKRYLDLIVNPESVKNFVLRTKVVKAVRKYLDDKGFLEVETPILNTIPGGATARP 210

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  AP+ Y + L+  G +R ++I   FR+E       P EF   + 
Sbjct: 211 FITHHNQLDIQMY-MRIAPELYLKELVVGGINRVYEIGRLFRNEGIDQTHNP-EFTTCEF 268

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
            M++ + +DI+   E +L  + ++ + G+T
Sbjct: 269 YMAYADYNDIMKMTEELLGNMVKDITGGST 298



 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 49/129 (37%), Gaps = 32/129 (24%)

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
           M+ L G DL+ +   Q   VC+  ++ S   + H SE  L     + I K  + N +  L
Sbjct: 430 MDKLFG-DLIEVDLVQPTFVCDQPQLMSPLAKYHRSEPELTERFELFILKREIANAYTEL 488

Query: 526 -------------------------------YRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
                                            A +   PP GG   GIDR+ MLL    
Sbjct: 489 NNPIVQRSNFEQQAKDKAAGDDEAQLVDEVFLDAIEHAFPPTGGWGLGIDRLAMLLADVD 548

Query: 555 NVREVSLFP 563
           N++EV LFP
Sbjct: 549 NIKEVILFP 557


>gi|240168025|ref|ZP_04746684.1| lysyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 1103

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 25/231 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           R  +H+      +D  + + +SG + RVR +GG++F  +RD  G  Q++   D++C +  
Sbjct: 647 RSPSHTVAQAMGADDKATLSVSGRILRVRHYGGVLFAHLRDWTGEMQLLL--DNSCLQQG 704

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-------LPLPVF 115
           ++      + +  LV            +TG +  S +    L V+          PLP  
Sbjct: 705 RAADFNATIDLGDLVE-----------MTGHMGSSKRGTRSLIVSSWRLIGKCLRPLPNK 753

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASS 173
            +       R + R++DL  +   ++++  R+ ++ S+R  + A+ FIE  TPIL     
Sbjct: 754 WKGLTDPEARVRTRYVDLAVNAESRDLLTARSTVLRSVRETLFAKGFIEVETPILQQVHG 813

Query: 174 PEGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
              AR F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 814 GAAARPFV--THINSYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 862



 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           R  + E  L A      + ++ E+      +A +
Sbjct: 1011 AERWDLVAWGIELGTAYSELTDPVEQRRRLHEQSLLAAGGDPEAMQLDED----FLQALE 1066

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  G+DR+VML+ G +++RE   FP+++
Sbjct: 1067 YAMPPTGGLGMGVDRVVMLITG-RSIRETLPFPLAK 1101


>gi|167745533|ref|ZP_02417660.1| hypothetical protein ANACAC_00224 [Anaerostipes caccae DSM 14662]
 gi|167655254|gb|EDR99383.1| hypothetical protein ANACAC_00224 [Anaerostipes caccae DSM 14662]
          Length = 637

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 128/289 (44%), Gaps = 36/289 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCID 74
           G  V ++G +   R  G   F +I+D  G  Q     D    E  K  +   +   + I 
Sbjct: 53  GKEVSVAGRMMFKRVMGKASFCNIQDLEGRIQAYVARDEIGVEEYKDFKKMDIGDIIGIK 112

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V             TG+  + A+++ +LS + + PLP           R++ R++DL 
Sbjct: 113 GTVFVTK---------TGEKSIHAKEVVLLSKSLK-PLPEKFHGLKDTDARYRQRYVDLI 162

Query: 135 RDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +   K   +KR++II+ +R  +  + F+E  TP+L  ++   A      +R  +  + A
Sbjct: 163 MNEESKGTFIKRSKIISKIRSFLDGQGFMEVETPMLVPNAGGAA------ARPFETHYNA 216

Query: 194 LPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           L +      + + Y + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + +
Sbjct: 217 LDEDVKLRISLELYLKRLIVGGLEKVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYN 275

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
            ++   EN+ R + +E     T++ N         F +I   DA+++Y 
Sbjct: 276 GMMELTENLYRYLAQEVVGSTTITYNGIEMDLGKPFEKITMVDAVKKYA 324



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 28/41 (68%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++ 
Sbjct: 450 ALEIGMPPTGGIGFGIDRMVMLLTDSSAIRDVLLFPTMKSL 490


>gi|91083579|ref|XP_968212.1| PREDICTED: similar to lysyl-tRNA synthetase [Tribolium castaneum]
 gi|270007824|gb|EFA04272.1| hypothetical protein TcasGA2_TC014562 [Tribolium castaneum]
          Length = 571

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 24/250 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP----DSACF-EIAKSVRSEWVLCID 74
           + ++G VH +R  G  +IF D+R      QV+A      D A F E    +R   ++ ++
Sbjct: 107 LSVAGRVHAIRESGAKLIFYDLRGEGTKLQVMATARNYGDEAKFAEDTGKIRRGDIIGVE 166

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G         +      G++ +   KI++LS     LP   +G ++  +  RF+ R+LDL
Sbjct: 167 G---------VPTKTKKGELSVMPTKIKLLSPCLHMLPHLHYGLKD--KETRFRQRYLDL 215

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGS 190
             ++  + I + R +II+  R       F+E  TP++   +    A+ F+   + +N   
Sbjct: 216 ILNSRVREIFEIRAKIISYTRRFFDELGFLEVETPMMNMIAGGATAKPFITHHNELNMDL 275

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 276 FMRV--APELYLKMLVVGGLDRVYEIGRLFRNEGIDLTHNP-EFTSCEFYMAYADYHDLI 332

Query: 251 NTMENVLRGV 260
              E ++ G+
Sbjct: 333 AITEALISGM 342



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L    N++EV LFP
Sbjct: 517 ALEYGLPPTGGWGMGIDRLTMFLTDNNNIKEVLLFP 552


>gi|332685807|ref|YP_004455581.1| lysyl-tRNA synthetase (class II) [Melissococcus plutonius ATCC
           35311]
 gi|332369816|dbj|BAK20772.1| lysyl-tRNA synthetase (class II) [Melissococcus plutonius ATCC
           35311]
          Length = 498

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/306 (21%), Positives = 135/306 (44%), Gaps = 40/306 (13%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L           ++++     ++G +   R  G + F +++D  G  Q+    
Sbjct: 40  RTHNSAELHKLFDDRTKEELNEMNLTASVAGRMITKRGKGKVGFANLQDRDGQIQLYVRK 99

Query: 55  DSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EEL 110
           D      +++ K         + G +M            TG++ + A+KI +LS A   L
Sbjct: 100 DEVGEEPYDLFKHADLGDFFGVTGQIMKTD---------TGEVTIKAKKITLLSKALRPL 150

Query: 111 PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
           P    G     +  R++ R+LDL   +++  +  +KR++II+ +R  + +  +IE  TP+
Sbjct: 151 PDKYHGLTNIEQ--RYRQRYLDLISNKESFDR-FIKRSQIISEIRRYLDSNGYIEVETPV 207

Query: 169 L-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L   +    AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +
Sbjct: 208 LHNEAGGAAARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDT 266

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRIC 278
              P EF  +++  ++ +  D+++  E ++R V E+      ++           F R+ 
Sbjct: 267 THNP-EFTMMEVYTAYTDYRDVMDLTEGIIRNVAEKVLGKTDITYGGQPVDLGKAFKRVH 325

Query: 279 YDDAIR 284
             DAI+
Sbjct: 326 MVDAIK 331



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + GMPP GG+  G+DR+VMLL  A ++R+V LFP
Sbjct: 460 SLEYGMPPTGGLGIGMDRLVMLLTDAPSIRDVLLFP 495


>gi|325288418|ref|YP_004264599.1| Lysyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324963819|gb|ADY54598.1| Lysyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 491

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 112/243 (46%), Gaps = 19/243 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  I+D  G  Q+ +  D+     FE  KS+    ++ + G+V
Sbjct: 55  VSVAGRIMSKRDMGKTCFAHIQDIGGRIQIYSRVDAFGEEKFETFKSLDIGDIIGVKGIV 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
                         G+I + A++  ILS +   LP    G        R++ R+LDL  +
Sbjct: 115 FRTKK---------GEISIRAEEYRILSKSLRNLPEKFHGLTNV--ETRYRQRYLDLIMN 163

Query: 137 T-LHKNIVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFLVPSRVNQGSFYAL 194
           + + +  + R++II +MR  +  + F+E  TP ++T      AR F+          Y  
Sbjct: 164 SDVKQTFIVRSQIIRAMREYLEDKGFLEVETPTLMTIPGGATARPFITHHNALDMQLYMR 223

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
                  K+L++  GF++ ++I   FR+E       P EF  +++  ++ + +DI+N  E
Sbjct: 224 IALELPLKRLIVG-GFEKVYEIGRIFRNEGISVKHNP-EFTMMELYQAYADYEDIMNLTE 281

Query: 255 NVL 257
           +++
Sbjct: 282 DMI 284



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           ++ + G+PP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 448 QSLEYGLPPTGGLGIGIDRLVMLLTDSASIRDVILFP 484


>gi|222152758|ref|YP_002561935.1| lysyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|222113571|emb|CAR41394.1| lysyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 496

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 28/286 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D+     ++G +   R  G + F  I+D  G  Q+    D+     +EI K       
Sbjct: 56  LHDLEETAIIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRKDAVGDENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G +M             G++ + A K+  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGDIMRTD---------MGELSIKATKLTHLSKALR-PLPEKFHGLTDIETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            LDL   RD+ ++  V R+++I+ +R  +   NF+E  TP+L   +   A    +     
Sbjct: 165 HLDLISNRDSFNR-FVTRSKMISEIRRYLDGLNFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNMDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTTIEVYQAYADFQ 282

Query: 248 DILNTMENVLR---------GVFEEFSNGNTVSNNFLRICYDDAIR 284
           DI+N  E +++         G  E       ++  F RI   DAI+
Sbjct: 283 DIMNLTEGIIQHAAKAVKGDGPIEYQGQVIKINEPFKRIHMVDAIK 328



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|213512082|ref|NP_001133698.1| syncoilin, intermediate filament protein [Salmo salar]
 gi|209154978|gb|ACI33721.1| Asparaginyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 559

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 112/280 (40%), Gaps = 21/280 (7%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++F+ +RD  G  Q V N        A  + +E  + + G 
Sbjct: 136 GERVKVFGWVHRMRKQGKNLLFIVLRDGTGFLQCVLNDKLCQCYNALVLSTESTVALYGT 195

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V     +        G  EL     E++ +A           E    ++   R + +R +
Sbjct: 196 V----KQVPEGKQAPGGHELHCDFWELVGLAPAGGADNLLNMESDVDVQLNNRHMMIRGE 251

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ +    R       + E + P L  +  EG       +   + +F  L Q
Sbjct: 252 NVSKILRIRSTVTQCFRDHFFNRGYYEITPPTLVQTQVEGGSTLFNLNYFGEEAF--LTQ 309

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  +D+L+ +E++
Sbjct: 310 SSQLYLETCIPALGDT-FCIAQSYRAEQSRTRRHLSEYTHIEAECPFMTYEDLLSRLEDL 368

Query: 257 LRGVFEEFSNGNTVS-------------NNFLRICYDDAI 283
           +  V +        S               F RI Y DAI
Sbjct: 369 VCDVVDRVLKSPAASLLYQVNPDFKPPKRPFKRINYSDAI 408


>gi|94500762|ref|ZP_01307291.1| lysyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94427084|gb|EAT12065.1| lysyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 513

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 23/200 (11%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP        + I+++ R++DL  +   +++ + R++II +MR  +   NF+E  TP+L
Sbjct: 143 PLPDKFHGLADQEIKYRQRYVDLIINQETRDLFMVRSKIIEAMRKYLSDRNFMEVETPML 202

Query: 170 TASSPEGARDFLVPSRVNQ-GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            A  P GA      +  N  G    L  AP+ Y + L+  GF+R F+I   FR+E   + 
Sbjct: 203 QAI-PGGATAKPFETHHNALGIDMYLRIAPELYLKRLLVGGFERVFEINRNFRNEGLSTR 261

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGV------------FEEFSNGNTVSNN--- 273
             P EF  ++   ++    D+++T E++LR +             E+ + GN V+     
Sbjct: 262 HNP-EFTMIEFYQAYATYHDLMDTTEDMLRNIAQDVLGTTDIVSTEKDAEGNVVNETVYD 320

Query: 274 ----FLRICYDDAIRRYGTD 289
               F R+   +A+ +Y  D
Sbjct: 321 FAKPFARLTMMEAVLKYNPD 340



 Score = 42.0 bits (97), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + GMPP  G   GIDR+VML   +  +++V LFP
Sbjct: 471 QALEYGMPPAAGEGIGIDRLVMLFTDSPTIKDVILFP 507


>gi|322705588|gb|EFY97173.1| lysyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 622

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 127/260 (48%), Gaps = 17/260 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDS------ACFEIAKSV 65
           G +D    ++L+G ++  R  G  + F DIR      QV+A  D+      +  E   ++
Sbjct: 155 GETDKSRMIQLAGRIYVRRSAGSKLFFYDIRSDGTRLQVLAQADNLDDKAPSFDEQHVNL 214

Query: 66  RSEWVLCIDGLVMSRSAETINAN-IITGQIELSAQKIEILS-VAEELPLPVFGEREYPES 123
           R   ++ I G     + +T   +   +G++ ++A +I +LS    ++P   +G +  PE+
Sbjct: 215 RRGDIIGIRGFPTRTNPKTKQGSGEYSGELSIAAVEITLLSPCLHQIPDDHYGFKN-PET 273

Query: 124 IRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            RF+ R+LDL  +   + I + R ++ + +R      +F+   TP+L   +    AR F+
Sbjct: 274 -RFRQRYLDLMMNEKSRQIFITRAKVDSYIRRWFDERDFVSVQTPMLNPIAGGATARPFV 332

Query: 182 VP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              + +N   F  L  AP+ Y ++L+  G +R +++   FR+E       P EF  L+  
Sbjct: 333 THHNDLNMDMF--LRVAPELYLKMLVVGGLNRVYEMGRQFRNESMDLTHNP-EFTTLEFY 389

Query: 241 MSFVEQDDILNTMENVLRGV 260
           M++ +  D++   E ++ G+
Sbjct: 390 MAYADVYDLMTMTEELVSGL 409


>gi|172037197|ref|YP_001803698.1| asparaginyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171698651|gb|ACB51632.1| asparaginyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 463

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 113/301 (37%), Gaps = 43/301 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + GWV   R      F+++ D   +  +    D +      +++    L   G  +  
Sbjct: 19  VTIQGWVRTKRELKEFAFMEVNDGSSLNSLQVVLDESVPNYQDALK----LLNTGASVEV 74

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           S   + +      IEL A K+++   ++    P+  +R   E +R     L  R +TL  
Sbjct: 75  SGTLVQSPGKGQNIELKAAKVQVYGTSDPETYPLQKKRHSFEFLR-TIGHLRSRTNTLGA 133

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
            +  R     ++       +FI   TPI+TAS  EGA +    +  + G      Q    
Sbjct: 134 VMRVRNACATAIHKFFQERDFIWIHTPIITASDCEGAGELFTVTNFDLGKVPLDKQQKID 193

Query: 201 YKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           Y Q                  +MA  F   +   P FR E+  + R   EF+ ++ EM+F
Sbjct: 194 YTQDFFGKQAYLTVSGQLEAEVMAMAFQNVYTFGPTFRAENSNTSRHLAEFWMVEPEMAF 253

Query: 244 VEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRICYDDA 282
            + +   +  E  L+ +F+          EF N            N ++N F RI Y  A
Sbjct: 254 CDIEGDQDLAEEFLKYIFKYVLKTCPEDMEFFNKRIDKSVLETADNIINNEFERITYTKA 313

Query: 283 I 283
           I
Sbjct: 314 I 314


>gi|296424997|ref|XP_002842030.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638287|emb|CAZ86221.1| unnamed protein product [Tuber melanosporum]
          Length = 579

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 116/280 (41%), Gaps = 25/280 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + GWVHR+R    ++F+ +RD  G  Q + + D      A ++  E  + I G++   
Sbjct: 157 VVVRGWVHRLRVQKSLVFITLRDGTGYLQCLLSGDLTKTYDALTLTVETTIAIYGVISPV 216

Query: 81  SAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
             E    N      EL A   +++  A   ++    +      P++ ++  R L +R D 
Sbjct: 217 PEE----NHAPDGHELHADYFQVIGKAPGGDDTISNIVAPNADPQT-KYDNRHLVIRGDV 271

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  ++ + R        +E + P +  +  EG       +   + ++  L Q+
Sbjct: 272 ASSVLKVRASVLRAFRKSYEDLGLLEVTPPCMVQTQVEGGSTLFEFNYYGEKAY--LTQS 329

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  + S  D  F +   FR E   + R   E+  ++ E++F+  DD+LN +E V+
Sbjct: 330 SQLYLETCLPSLGD-VFCVQESFRAERSLTRRHLSEYTHIEAELAFITFDDLLNHLEEVI 388

Query: 258 -----RGVFEEFSNGNTVSNN---------FLRICYDDAI 283
                  + +    G     N         F+R+ Y DAI
Sbjct: 389 CRTINYALTDPLIKGKVAELNPKFEAPERPFMRMTYADAI 428


>gi|257453433|ref|ZP_05618728.1| lysyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257449185|gb|EEV24133.1| lysyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 510

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 117/249 (46%), Gaps = 17/249 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ I D  G  Q   + +    EI    ++ W +   G ++  
Sbjct: 72  VTVAGRIMLKRVMGKASFVTIADMTGRIQAYVSKNDLGEEIYNDFKT-WDI---GDIIGV 127

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           +      N  TG++ + A ++++L+ +   PLP           R++ R LDL  +   +
Sbjct: 128 TGYVFRTN--TGELSVHATEVQLLTKSLR-PLPDKFHGLSDTEARYRSRHLDLMTNEDSR 184

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  + R+++I  +R  M+ E ++E  TP++    P GA  R F+          + L  A
Sbjct: 185 NAFIIRSKVIAGIREYMLNERYMEVETPMMHVI-PGGAVARPFVTHHNALDMPLF-LRIA 242

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   ++ + +D++   EN  
Sbjct: 243 PELYLKRLVVGGFERVFEINRNFRNEGVSARHNP-EFTMIEFYQAYADYEDLMKLTEN-- 299

Query: 258 RGVFEEFSN 266
             +FE+ +N
Sbjct: 300 --MFEKLAN 306



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 468 ALSYGLPPTAGEGIGIDRLVMLFTNAPSIRDVILFP 503


>gi|126437708|ref|YP_001073399.1| lysyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|126237508|gb|ABO00909.1| lysyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 512

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 20/270 (7%)

Query: 5   RTHSCG-------DLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTH+         DL V S  G  V ++G V   R  G + F  +++  G TQ+ A    
Sbjct: 49  RTHTLAEVRAAFPDLPVDSQTGEIVGVAGRVVFARNSGKLCFATLQEGDG-TQLQAM--I 105

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +  E+ +     W   +D G ++S   + I++    G++ + A   +I+S A   PLPV 
Sbjct: 106 SLAEVGQESLDSWKADVDLGDIVSVHGQVISSR--RGELSVLADSWQIISKALR-PLPV- 161

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASS 173
             +E  E  R + R++DL      + I + R  ++ ++R  +    F+E  TP+L T + 
Sbjct: 162 AHKEMSEEARVRQRYVDLIVRPEARTIARQRVAVVRALRNALERRGFLELETPMLQTLAG 221

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  GF++ F++   FR+E   S   P E
Sbjct: 222 GAAARPFVTHSNALDVDLY-LRIAPELFLKRALVGGFEKVFELNRNFRNEGIDSTHSP-E 279

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++ + +D       +++ V +E
Sbjct: 280 FAMLETYQAYGDYNDSAVVTRELIQEVADE 309



 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL    FE+A+G        I+    E   +A +       V+++ F     A + GM
Sbjct: 420 KWDLYVRKFELATGYSELIDPIIQRERFEEQARAAAAGDDEAMVLDDDF---LAALEYGM 476

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   GIDR++M L G  ++RE  LFP+
Sbjct: 477 PPSTGTGMGIDRLLMALTGL-SIRETILFPI 506


>gi|292670845|ref|ZP_06604271.1| lysine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292647466|gb|EFF65438.1| lysine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 503

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 110/258 (42%), Gaps = 28/258 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SACFEIAKSVRS 67
           L   + G  V ++G +  +R HG   F  + D  G  QV    D        E  K +  
Sbjct: 58  LAEDEEGKEVYIAGRLMAIRGHGKASFSTLNDRTGNIQVYFKLDVLGEQKYKEEFKRLDI 117

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRF 126
             ++ I G+V              G+I +  +   +LS A   LP    G ++     R+
Sbjct: 118 GDIIGIRGVVFKTR---------RGEITVRVEDFNLLSKALRPLPEKFHGLKDV--DTRY 166

Query: 127 KYRFLDLR-----RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
           + R++DL      RDT  K    RTRII S+R  +   +F+E  TP+L T +    AR F
Sbjct: 167 RQRYIDLMVNYEVRDTFRK----RTRIIQSIRRYLDERDFLEVETPVLSTIAGGAAARPF 222

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A +   + L+  G DR +++   FR+E       P EF  +++ 
Sbjct: 223 ITHHNALDIDLY-LRIATELNLKRLIVGGLDRVYEMGRIFRNEGMDVRHNP-EFTTIEIY 280

Query: 241 MSFVEQDDILNTMENVLR 258
            +F +  D++   E ++R
Sbjct: 281 QAFADYRDLMEITEGIVR 298



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 29/43 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + G+PP GG+  G+DR+VMLL  + ++R+V LFP  +   +
Sbjct: 461 ALEYGLPPTGGLGIGVDRLVMLLTDSPSIRDVLLFPTMKPLAE 503


>gi|157151486|ref|YP_001450052.1| lysyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|189082972|sp|A8AW92|SYK_STRGC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157076280|gb|ABV10963.1| lysyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 496

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 113/251 (45%), Gaps = 19/251 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D+     ++G +   R  G + F  I+D  G  Q+    D      +EI K       
Sbjct: 56  LHDLADTATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDEVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++ ++  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFNR-FVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLR 258
           DI++  E +++
Sbjct: 283 DIMDLTEGIIQ 293



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|150021256|ref|YP_001306610.1| lysyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|166230598|sp|A6LMS4|SYK_THEM4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|149793777|gb|ABR31225.1| lysyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 502

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 133/306 (43%), Gaps = 22/306 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           FV  +G +  +R HG   F  I+D YG  Q     D    E  +  +    +   G ++ 
Sbjct: 54  FVSTAGRIMSLRKHGKSAFFHIKDFYGRIQAYIRKDVVGEEAYEFFKEHIAI---GDIVG 110

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDT 137
                  +   TG+I +  ++I++L+     P+P        + + ++ R++D+    DT
Sbjct: 111 VKGNVFKSK--TGEITILIKEIKLLNKPLR-PMPEKWHGIKDKEVLYRQRYVDMIANDDT 167

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQ 196
           L++  V R  +I  +R  + ++ FIE  TPIL   +    AR F+    V     Y +  
Sbjct: 168 LNRFKV-RFEVIKLIRDFLNSKGFIEVETPILEYVTGGASARPFVTHLNVFDIEMY-MRI 225

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + Y +  +  GF++ +++   FR+E       P EF  +++  ++ + +D++N  E +
Sbjct: 226 ATELYLKRFIVGGFEKVYELGKNFRNEGLSYKHHP-EFTSIEIYQAYADYEDMMNLTEEL 284

Query: 257 LRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY-GTDKPDLRNPIIMHNVTEHF 306
              + E+      +         S  + RI   D I+ + G D  +     +M  + EH 
Sbjct: 285 FVYIVEKLFGTTKIKYQNVELDFSRPWRRIKMRDFIKEHLGVDILEDSMGRMMDVLEEHG 344

Query: 307 VHSEFR 312
           V  E R
Sbjct: 345 VEVEIR 350



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP GG+  GIDR+VMLL  +  +R+V  FP+
Sbjct: 446 RALEYGMPPTGGLGIGIDRLVMLLTNSATIRDVIAFPL 483


>gi|108801721|ref|YP_641918.1| lysyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119870872|ref|YP_940824.1| lysyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|108772140|gb|ABG10862.1| lysyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119696961|gb|ABL94034.1| lysyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 512

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 20/270 (7%)

Query: 5   RTHSCG-------DLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTH+         DL V S  G  V ++G V   R  G + F  +++  G TQ+ A    
Sbjct: 49  RTHTLAEVRAAFPDLPVDSQTGEIVGVAGRVVFARNSGKLCFATLQEGDG-TQLQAM--I 105

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +  E+ +     W   +D G ++S   + I++    G++ + A   +I+S A   PLPV 
Sbjct: 106 SLAEVGQESLDSWKADVDLGDIVSVHGQVISSR--RGELSVLADSWQIISKALR-PLPV- 161

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASS 173
             +E  E  R + R++DL      + I + R  ++ ++R  +    F+E  TP+L T + 
Sbjct: 162 AHKEMSEEARVRQRYVDLIVRPEARTIARQRVAVVRALRNALERRGFLELETPMLQTLAG 221

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  GF++ F++   FR+E   S   P E
Sbjct: 222 GAAARPFVTHSNALDVDLY-LRIAPELFLKRALVGGFEKVFELNRNFRNEGIDSTHSP-E 279

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++ + +D       +++ V +E
Sbjct: 280 FAMLETYQAYGDYNDSAVVTRELIQEVADE 309



 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL    FE+A+G        I+    E   +A +       V++  F     A + GM
Sbjct: 420 KWDLYVRKFELATGYSELIDPIIQRERFEEQARAAAAGDDEAMVLDEDF---LAALEYGM 476

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   GIDR++M L G  ++RE  LFP+
Sbjct: 477 PPSTGTGMGIDRLLMALTGL-SIRETILFPI 506


>gi|320104205|ref|YP_004179796.1| lysyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319751487|gb|ADV63247.1| lysyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 587

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 117/271 (43%), Gaps = 26/271 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW--- 69
           G    G  VR++G +   R  G ++FL +RD  G  Q+    +    E A ++  E    
Sbjct: 149 GADRPGPSVRVAGRIVLRRGQGKVVFLTLRDWTGSLQIFIGKNQVG-ETAWALTGELDLG 207

Query: 70  -VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ +DG +          +  TG++ + A  +  LS +  LP P          +R + 
Sbjct: 208 DLIGVDGTL---------GHTKTGELTVFATGLTFLSKSL-LPPPEKYHGLTDTELRSRM 257

Query: 129 RFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R++DL  +       + R++++ S R  +  + ++E  TP++ A +    AR F+     
Sbjct: 258 RYVDLASNPESMAAFLGRSKLVASFRSTLGDQGYVEVETPMMQAIAGGAAARPFVTHHNA 317

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                + L  AP+ Y + L+  G +R F+I   FR+E       P EF  ++   ++ + 
Sbjct: 318 LDLQLF-LRIAPELYLKRLLVGGMERVFEIGRVFRNEGISPKHNP-EFTMMEAYQAYGDY 375

Query: 247 DDILNTME-------NVLRGVFEEFSNGNTV 270
             +++  E       N L G FE   NG  +
Sbjct: 376 RTMMDLTERLIVNAINALDGRFERTWNGRAI 406



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 3/89 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV--GISKEVVENRFGGLY-RAFQCGMPP 535
           A +++L  +G E+A+     +  ++  Q F     G  +E    R    + RA +  MPP
Sbjct: 494 AERFELFVHGMELANAYTELNDPDLQDQLFRRQLQGQKEEDSMARIDDDFIRALKHAMPP 553

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GG+  GIDR+ M+LL   ++R+V LFP+
Sbjct: 554 AGGLGIGIDRLCMVLLDKASIRDVILFPL 582


>gi|312071859|ref|XP_003138802.1| hypothetical protein LOAG_03217 [Loa loa]
 gi|307766036|gb|EFO25270.1| hypothetical protein LOAG_03217 [Loa loa]
          Length = 602

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 114/244 (46%), Gaps = 22/244 (9%)

Query: 23  LSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCIDGL 76
           ++G V   R  GG +IF D+       QV+AN      D A   +   ++   ++ ++G 
Sbjct: 140 VAGRVFSKRESGGKLIFYDLHGEGTRLQVLANARFHSGDEAFDNLHDRIKRGDIIGVNGY 199

Query: 77  -VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
              S+S E    +II  +I      I++      LP   FG +   +  R++ R+LDL  
Sbjct: 200 PARSKSGEL---SIIPYEI------IQLTPCLHMLPHTHFGLKN--QETRYRMRYLDLIM 248

Query: 136 DTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           +   KN  V R+R+I+ +R  +    F+E  TP++   +    A+ F+          Y 
Sbjct: 249 NPDVKNRFVTRSRMISFLRRYLDNLGFLEVETPMMNLIAGGATAKPFITHHNDLDMDLY- 307

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++   
Sbjct: 308 LRVAPELYLKMLVVGGIDRVYEIGRVFRNEGIDQTHNP-EFTSCEFYMAYADYEDLMKIT 366

Query: 254 ENVL 257
           E++L
Sbjct: 367 EDML 370



 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M+L  + N++EV  FP
Sbjct: 549 ALEYGLPPTAGWGMGIDRLAMILTDSNNIKEVLFFP 584


>gi|586059|sp|P37879|SYK_CRIGR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|469122|emb|CAA83505.1| Lysyl tRNA Synthetase [Cricetulus longicaudatus]
          Length = 597

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 118/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 126 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFVRINNKLRRGDIIGVQ 185

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 186 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 234

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R +II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 235 ILNDFVRQKFIVRAKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 293

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 294 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 351

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E +L G+ +  +    ++
Sbjct: 352 EITEKMLSGMVKSITGSYKIT 372



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 536 ALEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFP 571


>gi|223934542|ref|ZP_03626463.1| lysyl-tRNA synthetase [bacterium Ellin514]
 gi|223897005|gb|EEF63445.1| lysyl-tRNA synthetase [bacterium Ellin514]
          Length = 486

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 118/289 (40%), Gaps = 31/289 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77
           V L+G +   R  G  IF DI+D  G  QV A   +     F+I K +     L + G++
Sbjct: 49  VALAGRITAYREMGKSIFFDIKDQSGRIQVYAQKAALGDEQFDIFKLLDMGDFLGVKGVL 108

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRD 136
            +           TG+I +      I+  A   P P          IR++ R+LDL   D
Sbjct: 109 FTTK---------TGEISVKLASFTIIGKALR-PPPEKWHGLVDTEIRYRQRYLDLMSND 158

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K  + R+ ++  +R    +  ++E  TP++       A    V      G  + L  
Sbjct: 159 EVKKTFLLRSAVVREIRNFFHSRGYVEVETPMMQNIPGGAAAAPFVTHHNALGCNFYLRI 218

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE--------QDD 248
           A + Y + L+  G D+ F+I   FR+E       P EF  L+   ++ +        Q  
Sbjct: 219 AIELYHKRLLVGGIDKMFEIGKNFRNEGLSRKHNP-EFTMLEAYQAYGDYETMMELVQSM 277

Query: 249 ILNTMENVLRGVFEEFSNGN-------TVSNNFLRICYDDAIR-RYGTD 289
           I++  E+VL  +  E  +          ++ N+ R  Y D +R + G D
Sbjct: 278 IVHVAESVLGTLVIEHKDAEGKVTKTIDLTPNWRRAKYKDLVREKAGQD 326



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+ M+LLG +++R+V LFP
Sbjct: 445 ALEHGMPPAGGMGMGIDRLCMMLLGQESIRDVILFP 480


>gi|228941737|ref|ZP_04104284.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228974661|ref|ZP_04135227.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981255|ref|ZP_04141555.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228778455|gb|EEM26722.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785064|gb|EEM33077.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817949|gb|EEM64027.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326942342|gb|AEA18238.1| asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 463

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 127/327 (38%), Gaps = 61/327 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V   
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSSVKVE 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             ++ +  A+           E+ A+KI+I  +++    P+  +R   E +R       L
Sbjct: 77  GKVIATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T   +   R R I +       +   F+   TPI+T S  EGA +     RV     
Sbjct: 125 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 181

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             +P+                       Q      A  F   +   P FR E+  + R  
Sbjct: 182 NNVPKGEDGKVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLR--------------GVFEEFSN-------GNTV 270
            EF+ ++ E++F E  D+++  E++L+                F  F +        N +
Sbjct: 242 AEFWMVEPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVI 301

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F RI Y +AI+       D + P+
Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328


>gi|194246559|ref|YP_002004198.1| asparaginyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|254782878|sp|B3R0I1|SYN_PHYMT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|193806916|emb|CAP18345.1| Asparaginyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 465

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 34/263 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF--EIAKSVRSEWVLCIDGL 76
           + L GW+   R    + F+D  D   I   Q+V   D   F  +I K ++    + I+G 
Sbjct: 20  IFLKGWIRNCRFQKKLFFIDFNDGTFINDLQIVCKKDKNFFLEKIKKKLQIGASIEIEGF 79

Query: 77  VMSRSAETINANIITGQIELSAQKIEIL--SVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           ++           I    EL A+KI IL  S  E L  P    + + ++   K   L LR
Sbjct: 80  LVKNFK-------INDIFELEAEKINILGSSSFEYLIQP----KNHSKAFLRKIPHLRLR 128

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
                     R+ +  ++      E+F+  +TPI+T +  EGA D    + +N       
Sbjct: 129 TKIFGSVFRIRSAVFLAIHEFFKNEDFLLTNTPIITVNDGEGAGDLFQITTLNLEKLVLT 188

Query: 195 PQAPQQY-------KQLL----------MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                 Y       K  L          +A+ F++ + + P FR ++  + +   EF+ L
Sbjct: 189 KDKKIDYLKDFFGRKTFLSVTGQLELEALATSFNKVYSLGPIFRADNSNTIKHVAEFWML 248

Query: 238 DMEMSFVEQDDILNTMENVLRGV 260
           ++EM+F   +  +  +E +L+ V
Sbjct: 249 EVEMAFSNLEKNMEIIERMLKKV 271



 Score = 37.7 bits (86), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 4/76 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G  R    E++      + IS E +E  +  L R   C    H G   G +R+++ 
Sbjct: 388 ELVGGSQREENLEILKNRMKELNISSENLE-WYLDLRRFGSC---VHSGFGLGFERLLIY 443

Query: 550 LLGAKNVREVSLFPMS 565
           L G +N+R+V  FP+S
Sbjct: 444 LTGVENIRDVIAFPLS 459


>gi|218899713|ref|YP_002448124.1| asparaginyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228903076|ref|ZP_04067213.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228910382|ref|ZP_04074197.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228967656|ref|ZP_04128677.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|218544920|gb|ACK97314.1| asparaginyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228792032|gb|EEM39613.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228849148|gb|EEM93987.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228856562|gb|EEN01085.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 463

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 127/327 (38%), Gaps = 61/327 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V   
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSSVKVE 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             ++ +  A+           E+ A+KI+I  +++    P+  +R   E +R       L
Sbjct: 77  GKVIATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T   +   R R I +       +   F+   TPI+T S  EGA +     RV     
Sbjct: 125 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 181

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             +P+                       Q      A  F   +   P FR E+  + R  
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLR--------------GVFEEFSN-------GNTV 270
            EF+ ++ E++F E  D+++  E++L+                F  F +        N +
Sbjct: 242 AEFWMVEPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVI 301

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F RI Y +AI+       D + P+
Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328


>gi|157151520|ref|YP_001450575.1| asparaginyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157076314|gb|ABV10997.1| asparaginyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 465

 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 112/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F+  K +
Sbjct: 32  VGKEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 91

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  + + P+     +E+     
Sbjct: 92  SQETSVFVTGIVKEDERSKFG-------YELDITDIEVIGESNDYPIT---PKEHGTDFL 141

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 142 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 197

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 198 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 255

Query: 243 FVEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           ++  D+ L+  E     +++GV +                   ++  F R+ YD+AI
Sbjct: 256 YLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAI 312



 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++   +++G+  +  E  F    R +  G  PHGG   G
Sbjct: 381 LAPEGYGEIIGGSMREEDYDALVAKMNDLGM--DTTEYEFYLDLRKY--GTVPHGGFGIG 436

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 437 IERMVTFVAGTKHIREAIPFP 457


>gi|291520197|emb|CBK75418.1| Lysyl-tRNA synthetase (class II) [Butyrivibrio fibrisolvens 16/4]
          Length = 681

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/278 (21%), Positives = 126/278 (45%), Gaps = 20/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +IRD  G  QV    D+   E     +   +  I G+    
Sbjct: 98  VSIAGRMMFKRVMGKASFCNIRDRKGDIQVYVARDAIGEEPYADFKKSDIGDIYGI---- 153

Query: 81  SAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
             +       TG+I + A+++ +LS + + LP    G  +    +R++ R++DL  +   
Sbjct: 154 --KGWAFRTKTGEISIHAEEMTLLSKSLQILPEKFHGLTDT--DMRYRQRYVDLVMNKDS 209

Query: 140 KNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
           +++ VKR+ ++  +R  +   +F+E  TPIL +++   A         +      L  + 
Sbjct: 210 RDVFVKRSLMMKEIRNFLAERDFMEVETPILVSNAGGAAARPFETHYNSLNEDVKLRISL 269

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R ++I   FR+E   +   P EF  +++  ++ + + ++   E + R
Sbjct: 270 ELYLKRLIVGGFERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMELTETMFR 328

Query: 259 GVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
            + E+      +S N         F R+   DA++++ 
Sbjct: 329 RLAEKVVGSTKISYNGIEIDLGKPFERMTMTDAVKKFA 366



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 28/41 (68%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  G+DR+ MLL  ++ +R+V LFP  ++ 
Sbjct: 492 ALEIGMPPTGGIGYGLDRLCMLLTDSQAIRDVLLFPTMKSL 532


>gi|167036745|ref|YP_001664323.1| lysyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115168|ref|YP_004185327.1| lysyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|238687706|sp|B0KCE4|SYK_THEP3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166855579|gb|ABY93987.1| lysyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928259|gb|ADV78944.1| lysyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 499

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 127/285 (44%), Gaps = 30/285 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74
           G  V L+G +   R HG   F DI+D  G  Q+    D+     +EI K +    ++ + 
Sbjct: 60  GKVVTLAGRIMSKRSHGKASFADIQDRDGRIQIYVKYDTVGEKNYEIFKILDIGDIIGVT 119

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           G V             TG+I +     ++LS + + LP    G ++    +R++ R+ DL
Sbjct: 120 GEVFKSK---------TGEITIRVTDFKLLSKSLQILPEKWHGLKD--PDLRYRQRYTDL 168

Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +   K + +KRT+II ++R  +    F+E  TPIL T +    AR F+          
Sbjct: 169 IINPEVKEVFLKRTKIIKAIREFLDNRGFLEVETPILHTIAGGAAARPFITHHNALDIDM 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G ++ +++   FR+E       P EF  L++  ++ +   ++ 
Sbjct: 229 Y-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNP-EFTLLELYEAYTDYYGMME 286

Query: 252 TMENVLRGVFEEFSNGNT----------VSNNFLRICYDDAIRRY 286
             E +   V ++  NG T          ++  + RI   DAI+ Y
Sbjct: 287 LTEQLFAYVAQKV-NGITKIVYQGTEIDLTPPWKRITMVDAIKEY 330



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VM +  A ++R+V LFP
Sbjct: 457 ALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILFP 492


>gi|126657196|ref|ZP_01728362.1| asparaginyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126621467|gb|EAZ92178.1| asparaginyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 463

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 118/304 (38%), Gaps = 49/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLV 77
           V + GWV   R      F+++ D   +   QVV +     ++ + K + +   + + G +
Sbjct: 19  VTIQGWVRTKRELKEFAFMEVNDGSSLNSLQVVLDESVPNYQDVLKLLNTGASVEVSGTL 78

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    +  N       IEL A K+++   ++    P+  +R   E +R     L  R +T
Sbjct: 79  VQSPGKGQN-------IELKAAKVQVYGTSDPETYPLQKKRHSFEFLR-TIGHLRSRTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           L   I  R     ++       +F+   TPI+TAS  EGA +    +  + G      Q 
Sbjct: 131 LGAVIRVRNACATAIHKFFQERDFLWIHTPIITASDCEGAGELFTVTNFDLGKVPLDKQQ 190

Query: 198 PQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              Y Q                  +MA  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 191 KIDYTQDFFGKQAYLTVSGQLEAEVMAMAFQNVYTFGPTFRAENSNTSRHLAEFWMVEPE 250

Query: 241 MSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRICY 279
           M+F + +   +  E  L+ +F+          EF N            N ++N F RI Y
Sbjct: 251 MAFCDIEGDQDLAEEFLKYIFKYVLEACPEDMEFFNKRIDKSVLETADNIINNEFERITY 310

Query: 280 DDAI 283
             AI
Sbjct: 311 TKAI 314


>gi|238486444|ref|XP_002374460.1| lysyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
 gi|220699339|gb|EED55678.1| lysyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
          Length = 552

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 136/332 (40%), Gaps = 45/332 (13%)

Query: 2   HRYRTHSCGDLGVSDVGSFV-RLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACF 59
           H     +   L  S + SFV RL G +   R  G  +IF DI  +    QV+ N      
Sbjct: 85  HLENNETVSALVGSTLLSFVLRLVGRIRTYRLAGSKLIFFDIVQNGHKVQVMCNLRQLPG 144

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP-------- 111
              ++ +  + L   G   S          +TG+   + +  E+  VA ELP        
Sbjct: 145 ITPEAFKKLYRLLRRGDAFS----------VTGRPHRTGRG-ELTVVATELPQLLSPCLH 193

Query: 112 -LPVFGERE----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
            +P+  +      YP  ++F      L   T    I  R+ II  +R   +  +F+E +T
Sbjct: 194 DVPLDAKEHENSPYPRHVQF------LADQTTTDIIKARSAIIQYLRQFFLDRSFMEVNT 247

Query: 167 PILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           PI+ + +    AR F   +        +L  AP+ + + L+  GFDR F+I P FR+E  
Sbjct: 248 PIVNSIAGGAIARPFYTSATEFPDRQLSLRIAPELWLKRLVVGGFDRVFEIGPSFRNEGI 307

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT----------VSNNFL 275
                P EF   +   ++   +D+L+  E++L G+ +   + N            S  F 
Sbjct: 308 DKTHNP-EFTTCEFYHAYANLEDLLSMTESLLSGMAQHIRDTNKDGTLKPTEVDFSTPFR 366

Query: 276 RICYDDAI-RRYGTDKPDLRNPIIMHNVTEHF 306
           RI +   I  + G   PDL +P  +  V + F
Sbjct: 367 RIDFLTGIEEKIGRKLPDLTSPDAVAQVKQLF 398


>gi|120601936|ref|YP_966336.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|120562165|gb|ABM27909.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 501

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 127/287 (44%), Gaps = 25/287 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G + F  I D  G  Q  A  +    E  K+ +   +  I G V  R  
Sbjct: 67  MAGRIVSHRSFGKVAFFHIMDRTGRMQCYAAREELGEEAYKTFKKLDIGDIVG-VSGRLF 125

Query: 83  ETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            T      TG++ LS  ++ +L+ +   LP    G ++    IR++ R++DL      ++
Sbjct: 126 RTK-----TGELTLSCTEVRLLTKSIRPLPEKYHGLKDV--EIRYRQRYVDLIVTPRARD 178

Query: 142 IV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
           I  KRT I+   R  + A  F+E  TP++ A  P GA  + F+          Y +  AP
Sbjct: 179 IFRKRTIIVREFRRFLEARGFMEVETPMMQAI-PGGATAKPFVTFHNALDMQLY-MRIAP 236

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF++ F+I   FR+E   +   P EF   +   ++   +D+++  E +  
Sbjct: 237 ELYLKRLLVGGFEKVFEINRNFRNEGISTQHNP-EFTMCEFYWAYATFEDLMDLTEELFS 295

Query: 259 GVFEEFSNGNTVS----------NNFLRICYDDAIRRYGTDKPDLRN 295
            +  E    + ++            ++R+ + +++ + G   P+  N
Sbjct: 296 HIAREVCGSSVITYQGQEVDLTPGKWVRLTFHESLEKVGGHSPEFYN 342



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL  + ++REV LFP+
Sbjct: 459 RALEYGMPPAAGQGVGIDRLVMLLTDSPSIREVILFPL 496


>gi|86157505|ref|YP_464290.1| lysyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|123723269|sp|Q2IPX5|SYK_ANADE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|85774016|gb|ABC80853.1| lysyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 513

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 21/257 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVMS 79
           L+G V  VR  G   FL +RD     QV    D      FE+ K      +L I  +V  
Sbjct: 65  LAGRVLAVRSFGKAAFLRVRDRSAELQVWVKKDRVGDQAFEVFK------LLDIGDIV-- 116

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTL 138
             AE       TG++ L A+   IL+ A   PLP           R++ R++DL     +
Sbjct: 117 -GAEGPATRTKTGELTLEARTFTILTKATR-PLPEKWHGLTDVEQRYRQRYVDLVVTPGV 174

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV-PSRVNQGSF---YAL 194
            +  VKR RI++ +R  + A  ++E  TP L    PE A      P   +  +      L
Sbjct: 175 REAFVKRARIVSGIRRFLDARGYLEVETPTL--HKPEEAGGAAARPFETHHNALDLDLKL 232

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G DR ++I   +R+E       P EF  ++   ++   +D++   E
Sbjct: 233 RIATELHLKRLVVGGLDRVYEIGRIWRNEGIDRRHNP-EFTSIEFYQAYATHEDLMRLTE 291

Query: 255 NVLRGVFEEFSNGNTVS 271
            ++  +  E + G  V+
Sbjct: 292 ELMHQLAVEVTGGPVVT 308



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 27/41 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           RA + GMPP  G   GIDR+ ML   + ++R+V LFP+ ++
Sbjct: 471 RALEHGMPPTAGEGIGIDRLAMLFTDSASIRDVILFPLLKS 511


>gi|71994340|ref|NP_001022304.1| lysyl (K) tRNA Synthetase family member (krs-1) [Caenorhabditis
           elegans]
 gi|62630002|gb|AAX88810.1| Lysyl (k) trna synthetase protein 1, isoform c [Caenorhabditis
           elegans]
          Length = 514

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 109/244 (44%), Gaps = 10/244 (4%)

Query: 17  VGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V   V ++G +H  R  G  ++F DI       Q++AN      ++      + +   D 
Sbjct: 43  VEEIVSVAGRIHSKRESGSKLVFYDIHGEGTHIQIMANAKFHTGDVDFVTLHDRIKRGDI 102

Query: 76  LVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           +  +  A    A    G++ L   +I ++      LP   FG ++  + +RF+ R+LDL 
Sbjct: 103 VGFTGRATRTKA----GELSLIPNEILQLTPCLHMLPHSHFGLKD--KELRFRKRYLDLI 156

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +  +  N V R++II  +R  +    F+E  TPI+   +        +    +      
Sbjct: 157 LNPRVKDNFVIRSKIITFLRRYLDNLGFLEVETPIMNQIAGGATAKPFITHHNDLDMNLF 216

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y ++L+  G DR +++   FR+E       P EF   +  M++ + +D++   
Sbjct: 217 LRVAPELYHKMLVVGGIDRVYEVGRLFRNEGIDLTHNP-EFTTCEFYMAYADYEDVIQLT 275

Query: 254 ENVL 257
           E++L
Sbjct: 276 EDLL 279



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M+L    N++EV LFP
Sbjct: 458 ALEYGLPPTGGWGMGIDRLSMILTDNNNIKEVLLFP 493


>gi|170780565|ref|YP_001708897.1| lysyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169155133|emb|CAQ00233.1| lysyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 513

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 6/182 (3%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIIN 150
           G++ + A +  I S A  LPLP     E  +  R + R+LDL  RD   KN++ R ++  
Sbjct: 148 GELSIMASEWRIASKAL-LPLPNL-HSELSDETRVRSRYLDLIVRDQARKNVLDRAKVNA 205

Query: 151 SMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
           SMR       ++E  TP+L        AR F+  S       Y L  AP+ Y +  +  G
Sbjct: 206 SMRETFRQRGYVEVETPMLQVMHGGASARPFVTHSNAFDTEMY-LRIAPELYLKRAVVGG 264

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
            DR F+I   FR+E   S   P EF  L+   ++ +   I    + +++      +  + 
Sbjct: 265 IDRVFEINRNFRNEGADSTHSP-EFAMLEAYEAYGDYTSIAELTQTLVQDAAMAVAGSHV 323

Query: 270 VS 271
           V+
Sbjct: 324 VT 325



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL------YRAFQCGMP 534
           ++DL   GFE+A+G   + + + ++Q    V  ++++       +       RA + GMP
Sbjct: 425 KWDLYIRGFELATG--YSELVDPVVQRERFVDQARQLARGDDEAMPLDEEFLRALEHGMP 482

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  G+DR++M + G   +RE  LFP+
Sbjct: 483 PSGGMGMGVDRLLMAITGL-GIRETILFPL 511


>gi|291166187|gb|EFE28233.1| lysine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 508

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 132/280 (47%), Gaps = 26/280 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS- 79
           V ++G +  +R HG   FL I+D  G  QV    D    E     ++  +  I G+  + 
Sbjct: 63  VSIAGRIMLIRGHGKASFLTIQDSEGRIQVYVRQDVVGEESYTDFKTYDIGDIIGVTGTV 122

Query: 80  -RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-T 137
            R+ +        G+I + A+++ +L+ +   PLP          +R++ R++DL  +  
Sbjct: 123 FRTHK--------GEITVKAKEVTLLTKSLH-PLPDKHAGLKDPDLRYRQRYVDLIVNPE 173

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
           + ++ +KR++ I +++  +    F+E  TPIL T +    AR F           Y +  
Sbjct: 174 VKESFIKRSKAIKALKEYLDNRGFLEVDTPILSTIAGGANARPFKTHHNTLNLEMY-MRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + Y + L+  GF++ +++   FR+E    +  P E+  +++  ++V+ ++I+   E +
Sbjct: 233 ANELYLKRLIVGGFEKVYEMGRMFRNEGMDINHNP-EYTAIEIYQAYVDYEEIMRLTEGI 291

Query: 257 LRGVFEEFSNGNTVSNN----------FLRICYDDAIRRY 286
           +  + E+ S G+ V +           + RI   DA++ Y
Sbjct: 292 VSYMAEK-STGSMVVDYQGTEIDFTPPWRRISMIDAVKEY 330



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR++MLL  A ++R+V LFP
Sbjct: 458 AIEVGLPPTGGLGIGVDRVIMLLTNASSIRDVILFP 493


>gi|331007549|ref|ZP_08330706.1| Lysyl-tRNA synthetase (class II) [gamma proteobacterium IMCC1989]
 gi|330418639|gb|EGG93148.1| Lysyl-tRNA synthetase (class II) [gamma proteobacterium IMCC1989]
          Length = 512

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 25/201 (12%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           PLP        + IR++ R++DL  +T  ++  K R+++I+ +R  + + +F+E  TP+L
Sbjct: 147 PLPDKYHGLADQEIRYRQRYVDLMVNTDVRDTFKIRSQVISFIRSYLNSSDFLEVETPML 206

Query: 170 TASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
             S P GA  R F+          Y L  AP+ Y + L+  GF+R ++I   FR+E   +
Sbjct: 207 Q-SIPGGATARPFVTHHNALDMDMY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGLST 264

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLR----GVFEEFSNGNTVSNN---------- 273
              P EF  L+   ++ + +D+++  E++LR     V       NTV N           
Sbjct: 265 RHNP-EFTMLEFYQAYADFNDLMDLTEDMLRQIALNVLGSTDVKNTVKNAEGEVTEEITY 323

Query: 274 -----FLRICYDDAIRRYGTD 289
                F R+   D+I +Y  D
Sbjct: 324 DFAKPFTRLSVFDSILQYNDD 344



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EIA+G    + +E   + F      K+  +N    +   Y RA + G+PP 
Sbjct: 418 RFEFFVGGREIANGFSELNDAEDQAERFKAQVAEKDAGDNEAMHYDEDYIRALEYGLPPT 477

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 478 AGEGIGIDRLVMLLTDSPSIRDVLLFP 504


>gi|218191199|gb|EEC73626.1| hypothetical protein OsI_08130 [Oryza sativa Indica Group]
          Length = 603

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 115/251 (45%), Gaps = 17/251 (6%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           C D+ VS       ++G +   R  G ++F+ +RD  G  Q+    DS   E  + +++ 
Sbjct: 57  CADVAVS-------IAGRIVARRAFGKLVFMTVRDDSGTIQLYCEKDSLTEEQFEQLKTI 109

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             +           +T       G++ +  +  EIL+ +  LPLP           R++ 
Sbjct: 110 IDIGDIIGANGSIKKTEK-----GELSVYVKNFEILTKS-LLPLPDKYHGLTDVDKRYRQ 163

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRV 186
           R++D+  +    ++ + R ++++ +R  M +  FIE  TP+L  A+    AR F+     
Sbjct: 164 RYVDMIANPEVADVFRTRAKVVSEIRKTMESFGFIEVETPVLQGAAGGAEARPFITHHNS 223

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            Q   Y L  A + + + ++  G ++ ++I   FR+E   +   P EF  ++M  ++ + 
Sbjct: 224 LQRDLY-LRIATELHLKRMLVGGLEKVYEIGRIFRNEGISTRHNP-EFTTIEMYEAYSDY 281

Query: 247 DDILNTMENVL 257
           + ++N  E ++
Sbjct: 282 ESMMNLAEEIV 292



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + + GMPP  G+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 562 SLEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPV 598


>gi|198467359|ref|XP_001354371.2| GA11433 [Drosophila pseudoobscura pseudoobscura]
 gi|198149207|gb|EAL31424.2| GA11433 [Drosophila pseudoobscura pseudoobscura]
          Length = 584

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 121/260 (46%), Gaps = 24/260 (9%)

Query: 13  GVSDVGSFVRLS----GWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           G++D  +  ++S    G VH +R  G  +IF D+R      QV+A+        AKS + 
Sbjct: 100 GLTDGETLEKVSLSVAGRVHAIRESGAKLIFYDLRGEGVKLQVMAS--------AKSYQP 151

Query: 68  EWVLCIDGLVMSRS----AETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122
           E     D   + R      +        G++ +   +I++LS     LP   FG ++  +
Sbjct: 152 ETAFETDTAKLRRGDIIGVKGHPGKTKKGELSIMPTEIKLLSPCLHMLPHLHFGLKD--K 209

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDF 180
             R++ R+LDL   + + +N   R +II+ +R  +    F+E  TP++   +    A+ F
Sbjct: 210 ETRYRQRYLDLILNNKVRENFQIRAKIISYVRQFLDRLGFLEIETPMMNMVAGGATAKPF 269

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +      +   + +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  
Sbjct: 270 VTHHNELKMDLF-MRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFY 327

Query: 241 MSFVEQDDILNTMENVLRGV 260
           M++ +  D+++  E ++ G+
Sbjct: 328 MAYADYADVMDITEQLISGM 347



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 522 ALEYGLPPTGGFGMGIDRLTMFLTDSNNIKEVLLFP 557


>gi|123967040|ref|YP_001012121.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|166229816|sp|A2BZ03|SYK_PROM5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123201406|gb|ABM73014.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 512

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 127/311 (40%), Gaps = 44/311 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----------NPDSACFEIAKSVRS--E 68
           V L+G V   R  G I F  I D  G  Q+            N     FE  K +    +
Sbjct: 53  VSLAGRVLAKRVMGKIAFFTITDQEGKIQLYLEKRIIDDYEINAKLLSFEDLKEIVDIGD 112

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
           W+     +  +            G++ +   K E+LS + + PLP           R++ 
Sbjct: 113 WIGVFGTIKKTNK----------GELSIKVSKWEMLSKSLQ-PLPDKWHGLTDIEKRYRQ 161

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186
           R+LDL  + L K + K R + I+ +R  +  +NF+E  TPIL + +    AR F+     
Sbjct: 162 RYLDLIVNPLSKTVFKTRAKCISLIRRWLDEKNFLEIETPILQSEAGGAEARPFITHHNT 221

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  A + + + ++  GF++ +++   FR+E   +   P EF  +++  +F   
Sbjct: 222 LDIPLY-LRIATELHLKRMVVGGFEKVYELGRIFRNEGVSTKHNP-EFTSVEIYQAFSNY 279

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVT 303
            D++N  E++++              N +  C D  +  Y     D   P   I M NV 
Sbjct: 280 IDMMNLTEDLIK--------------NIVLSCCDSLVINYQDKVIDFSKPWKRISMKNVV 325

Query: 304 EHFVHSEFRVF 314
           + +   +F  F
Sbjct: 326 KEYTGIDFDSF 336



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 456 QALEIGMPPTGGLGIGIDRLVMLLTNSSSIRDVIPFPL 493


>gi|119616027|gb|EAW95621.1| lysyl-tRNA synthetase, isoform CRA_c [Homo sapiens]
          Length = 634

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 163 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQ 222

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 223 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 271

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++II  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 272 ILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 330

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 331 LY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLM 388

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    V+
Sbjct: 389 EITEKMVSGMVKHITGSYKVT 409



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 573 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 608


>gi|260909949|ref|ZP_05916636.1| asparagine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635899|gb|EEX53902.1| asparagine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 467

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 112/274 (40%), Gaps = 30/274 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L  +D GS V + GWV   R    + F+ + D   I   QVV +P     E+ 
Sbjct: 6   RTKIVDVLQRTDFGSEVNVKGWVRTHRSSKVVDFIALNDGSTINNVQVVVDPTKFDTELL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           K + +   +   G ++    +  N+ I   ++EL      +     + P+   G+  EY 
Sbjct: 66  KQITTGACVNATGKLVESQGQGQNSEIQCTELEL------LGGCGSDYPMQKKGQTFEYM 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                ++  L LR +T    +  R  +  ++        F    TPI+TAS  EGA +  
Sbjct: 120 R----QHAHLRLRTNTFGAVMRIRHNMAIAIHQYFHDHGFYYFHTPIITASDAEGAGEMF 175

Query: 182 VPSRVN--------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDED 224
             +  N                 F+    +     QL   L A+   + +   P FR E+
Sbjct: 176 QVTTKNLNDLKKDESGKVNYNDDFFGKMTSLTVSGQLEGELGATALGQIYTFGPTFRAEN 235

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             + R   EF+ ++ E++F++ DD+++  E+ ++
Sbjct: 236 SNTPRHLAEFWMIEPEVAFIDLDDLMDLEEDFIK 269


>gi|195115232|ref|XP_002002168.1| GI17232 [Drosophila mojavensis]
 gi|193912743|gb|EDW11610.1| GI17232 [Drosophila mojavensis]
          Length = 558

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 101/240 (42%), Gaps = 12/240 (5%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V++ GWVHR+R  G  +IF+ +RD  G  Q V N D  C           VL  +  V+ 
Sbjct: 138 VKIYGWVHRLRRQGKSLIFITLRDGSGFLQCVLN-DLLC-----QTYEALVLSTESTVVL 191

Query: 80  RSAETI--NANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                +        G  EL     E++ +A           E    ++   R + +R + 
Sbjct: 192 YGTLKVVPEGKTAPGGHELIVDYWELIGLAPPGGADAILNEEAHPDVQLDNRHIMIRGEN 251

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
             K +  R+ ++ + R   +   + E + P L  +  EG           + ++  L Q+
Sbjct: 252 TSKVLKMRSVVMQAFRAHYLDRGYNEVTPPTLVQTQVEGGSTLFKMQYFGEEAY--LTQS 309

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  +D+L+ +E+++
Sbjct: 310 SQLYLETCLPALGD-VFTIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFEDLLDRIEDLI 368


>gi|46450201|gb|AAS96849.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
          Length = 501

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 126/287 (43%), Gaps = 25/287 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G + F  I D  G  Q  A  +    E  K+ +   +    G ++  S 
Sbjct: 67  MAGRIVSHRSFGKVAFFHIMDRTGRMQCYAAREELGEEAYKTFKKLDI----GDIVGVSG 122

Query: 83  ETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                   TG++ LS  ++ +L+ +   LP    G ++    IR++ R++DL      ++
Sbjct: 123 RLFRTK--TGELTLSCTEVRLLTKSIRPLPEKYHGLKDV--EIRYRQRYVDLIVTPRARD 178

Query: 142 IV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
           I  KRT I+   R  + A  F+E  TP++ A  P GA  + F+          Y +  AP
Sbjct: 179 IFRKRTIIVREFRRFLEARGFMEVETPMMQAI-PGGATAKPFVTFHNALDMQLY-MRIAP 236

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF++ F+I   FR+E   +   P EF   +   ++   +D+++  E +  
Sbjct: 237 ELYLKRLLVGGFEKVFEINRNFRNEGISTQHNP-EFTMCEFYWAYATFEDLMDLTEELFS 295

Query: 259 GVFEEFSNGNTVS----------NNFLRICYDDAIRRYGTDKPDLRN 295
            +  E    + ++            ++R+ + +++ + G   P+  N
Sbjct: 296 HIAREVCGSSVITYQGQEVDLTPGKWVRLTFHESLEKVGGHSPEFYN 342



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL  + ++REV LFP+
Sbjct: 459 RALEYGMPPAAGQGVGIDRLVMLLTDSPSIREVILFPL 496


>gi|262282664|ref|ZP_06060432.1| lysyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262261955|gb|EEY80653.1| lysyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 496

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 113/251 (45%), Gaps = 19/251 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D+     ++G +   R  G + F  I+D  G  Q+    D      +EI K       
Sbjct: 56  LHDLADTATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDEVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++ ++  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFNR-FVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLR 258
           DI++  E +++
Sbjct: 283 DIMDLTEGIIQ 293



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|313680007|ref|YP_004057746.1| asparaginyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152722|gb|ADR36573.1| asparaginyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 439

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 99/234 (42%), Gaps = 16/234 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74
           G  VRL+GW+   R  G + FL +RD  G  Q      N D A F  A  +R E  L + 
Sbjct: 14  GQEVRLAGWLVNRRSKGKLHFLIVRDGTGFIQATVFKGNVDEATFVRADHLRQETALEVW 73

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDL 133
           G V + +          G  E+    +E+LS  E E P+     +E+       +R L L
Sbjct: 74  GRVKADAR-------APGGYEIEVLGLEVLSEPEGEYPI---TPKEHGIEFLMDHRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  I  +         F+   TPILT ++ EG  + L    +  G    
Sbjct: 124 RHRRPWAVMRIRDEIERATYDFFAQRGFVRFDTPILTPNAVEGTTE-LFEVDLFDGQKAY 182

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           L Q+ Q Y +   A  + + +   P FR E  ++ R   EF+ ++ E +F++ +
Sbjct: 183 LSQSGQLYAE-AGALAYGKVYTFGPTFRAERSKTRRHLLEFWMVEPEAAFLDHE 235


>gi|227509315|ref|ZP_03939364.1| lysyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227191245|gb|EEI71312.1| lysyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 501

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 138/305 (45%), Gaps = 26/305 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F D++D  G  Q+    D    +I    +   +    G  +  
Sbjct: 61  VTVAGRMMAKRGKGKVGFADLKDRTGKIQIYVRKDIVGDDIYHIFKRSDI----GDHLGI 116

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTL 138
           S + I  ++  G++ + A+ +  LS A   PLP        +  +++ R+LDL   +D+ 
Sbjct: 117 SGQIIKTDM--GELTVRAESVTFLSKALR-PLPDKWHGLQDQEQKYRQRYLDLISNQDSF 173

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
            +   KR+ II ++R  + + +++E  TP+L   +    AR F+          Y L  A
Sbjct: 174 DR-FHKRSHIITAIRNYLDSHDYLEVETPVLHNQAGGANARPFITHHNALNIDLY-LRIA 231

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G +R ++I   FR+E   +   P EF  L+  +++ +  D+++  E + 
Sbjct: 232 LELHLKRLIVGGMERVYEIGRVFRNEGMDTRHNP-EFTMLESYVAYYDFHDVMDETEGIF 290

Query: 258 RGVFEEFSN-------GNTVSNN--FLRICYDDAIRRY-GTD--KPDLRNPIIMHNVTEH 305
           +   +  ++       G+T+  +  F R    DAI+ Y G D  KP + +        EH
Sbjct: 291 KAAAKTVTDDGMITYQGHTIDLDKPFKRQHMVDAIKEYTGIDFWKP-MDDDAAKKLADEH 349

Query: 306 FVHSE 310
            +H E
Sbjct: 350 HIHYE 354



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 8/52 (15%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GI ++ +E        A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 447 GIDEDYIE--------ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 490


>gi|195565967|ref|XP_002106565.1| GD16054 [Drosophila simulans]
 gi|194203945|gb|EDX17521.1| GD16054 [Drosophila simulans]
          Length = 610

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 20/248 (8%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           + ++G VH +R  G  +IF D+R      QV+A+        AKS +SE     D   + 
Sbjct: 145 LSVAGRVHAIRESGAKLIFYDLRGEGVKVQVMAS--------AKSYKSEADFETDTSKLR 196

Query: 80  RSAETIN-----ANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           R  + I           G++ +   +I++LS     LP   FG ++  +  R++ R+LDL
Sbjct: 197 R-GDIIGVVGHPGKTKKGELSVMPSEIKLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 253

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
              + + +N   R +II+ +R  +    F+E  TP++   +        V    +     
Sbjct: 254 ILNNKVRENFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNDLKMDL 313

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  DI++ 
Sbjct: 314 FMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYADIMDI 372

Query: 253 MENVLRGV 260
            E ++ G+
Sbjct: 373 TEQLVSGM 380



 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 555 SLEYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFP 590


>gi|238926930|ref|ZP_04658690.1| lysine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238885164|gb|EEQ48802.1| lysine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 501

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 112/259 (43%), Gaps = 20/259 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SACFEIAKSVRS 67
           L   + G  V ++G +  +R HG   F  + D  G  QV    D        E  K +  
Sbjct: 56  LAEDEEGKEVHIAGRLMAIRGHGKASFSTLNDRTGNIQVYFKLDVLGEQKYKEEFKRLDI 115

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRF 126
             ++ I G+V              G++ +  +  ++L+ A   LP    G ++     R+
Sbjct: 116 GDIIGIRGVVFKTR---------RGEVTVRVEDFDLLAKALRPLPEKFHGLKDV--DTRY 164

Query: 127 KYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL     + +   KRT I+ S+R  + A +F+E  TP+L T +    AR F+   
Sbjct: 165 RQRYLDLMVNQEVRETFRKRTAILQSIRRYLDARDFLEVETPVLSTLAGGAAARPFVTHH 224

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  A +   + L+  G DR +++   FR+E       P EF  +++  +F 
Sbjct: 225 NALDIDLY-LRIATELSLKRLIVGGLDRVYEMGRVFRNEGMDVRHNP-EFTSIEIYQAFA 282

Query: 245 EQDDILNTMENVLRGVFEE 263
           +  D++   E ++R   E+
Sbjct: 283 DHYDLMAITEGIVRQAAED 301



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 29/43 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + G+PP GG+  GIDR+VMLL  + ++R+V LFP  +   +
Sbjct: 459 ALEYGLPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPTMKPLAE 501


>gi|257055673|ref|YP_003133505.1| lysyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256585545|gb|ACU96678.1| lysyl-tRNA synthetase (class II) [Saccharomonospora viridis DSM
           43017]
          Length = 499

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 116/259 (44%), Gaps = 11/259 (4%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            G  V ++G V   R  G + F  IRD  G  Q++ + D    E  +S +S+  L   G 
Sbjct: 60  TGERVSITGRVMLYRTGGKLCFATIRDASGQIQIMLSLDKVGAESLQSWKSDIDL---GD 116

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            +  + E I +    G++ +   +  + S A   PLP   +       R + R++DL  +
Sbjct: 117 HVGVTGEVITSK--RGELSVLVDEWRLTSKALR-PLPEKHKGLTDPEARVRQRYVDLIVN 173

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
              + +V+ R   + ++R  ++   F+E  TP+L        AR F           Y L
Sbjct: 174 PEARQMVRHRAATLQALRSGLLERGFLEVETPMLHLVHGGATARPFTTHINAYDLDLY-L 232

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ + + L+  G ++ F+I   FR+E   S   P EF  L+  M++ + +D +   +
Sbjct: 233 RIAPELFLKRLVVGGMEKVFEINRSFRNEGADSTHNP-EFTMLEWYMAYGDYNDGMGVTQ 291

Query: 255 NVLRGVFEEFSNGNTVSNN 273
           +++R   E    G+TV  N
Sbjct: 292 DLMRRAAEAVF-GDTVVRN 309



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G+  GIDR++M   G K +RE  LFPM
Sbjct: 459 RALEYGMPPTVGVGMGIDRLLMAFTG-KGIRETILFPM 495


>gi|195350522|ref|XP_002041789.1| GM11355 [Drosophila sechellia]
 gi|194123594|gb|EDW45637.1| GM11355 [Drosophila sechellia]
          Length = 574

 Score = 60.8 bits (146), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 20/248 (8%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           + ++G VH +R  G  +IF D+R      QV+A+        AKS +SE     D   + 
Sbjct: 109 LSVAGRVHAIRESGAKLIFYDLRGEGVKVQVMAS--------AKSYKSEADFETDTSKLR 160

Query: 80  RSAETIN-----ANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           R  + I           G++ +   +I++LS     LP   FG ++  +  R++ R+LDL
Sbjct: 161 R-GDIIGVVGHPGKTKKGELSVMPSEIKLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 217

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
              + + +N   R +II+ +R  +    F+E  TP++   +        V    +     
Sbjct: 218 ILNNKVRENFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNDLKMDL 277

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  DI++ 
Sbjct: 278 FMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYADIMDI 336

Query: 253 MENVLRGV 260
            E ++ G+
Sbjct: 337 TEQLVSGM 344



 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 519 SLEYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFP 554


>gi|58382414|ref|XP_311928.2| AGAP002969-PA [Anopheles gambiae str. PEST]
 gi|55241789|gb|EAA07595.2| AGAP002969-PA [Anopheles gambiae str. PEST]
          Length = 557

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 115/287 (40%), Gaps = 25/287 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G  + G  VR+ GWVHR+R  G G++F+ +RD  G  Q V   D+ C        +  VL
Sbjct: 129 GADNRGVRVRIYGWVHRLRRQGKGLMFITLRDGTGFLQCVLT-DTLC-----QTYNALVL 182

Query: 72  CIDGLVM--SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
             +  V       E        G  EL A   E++ +A           E    ++   R
Sbjct: 183 STESSVQLFGTLKEVPAGKTAPGGHELHADYWELIGLAPAGGADAILNEEAHPDVQLDNR 242

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            + +R +   K +  R  ++ + R       + E + P L  +  EG           + 
Sbjct: 243 HIMIRGENTSKILKMRDVVMQAFRSHYFDRGYTEVTPPTLVQTQVEGGATLFKLDYFGEE 302

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV----- 244
           +F  L Q+ Q Y +  + +  D  F +A  +R E  R+ R   E+  ++ E  F+     
Sbjct: 303 AF--LTQSSQLYLETCIPALGD-VFCVAQSYRAEQSRTRRHLAEYSHIEGECPFITFDDL 359

Query: 245 ---EQDDILNTMENVLRG----VFEEFSNGNTVSNN-FLRICYDDAI 283
               +D I + ++ VL+     + +E + G       F R+ Y DAI
Sbjct: 360 LDRLEDLICDVVDRVLKSPWGYMVQELNPGFVAPKRPFRRMNYADAI 406



 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 12/90 (13%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGI 539
           L+ N  EI  G +R+   + +L  +   GI  +     V+ R          G  PHGG 
Sbjct: 474 LLPNVGEIVGGSMRSWKYDELLDGYKREGIDPKPYYWYVDQRV--------YGTEPHGGY 525

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G++R +  LL   ++REV L+P     C
Sbjct: 526 GLGLERFLCWLLNRYHIREVCLYPRFLERC 555


>gi|167764830|ref|ZP_02436951.1| hypothetical protein BACSTE_03221 [Bacteroides stercoris ATCC
           43183]
 gi|167697499|gb|EDS14078.1| hypothetical protein BACSTE_03221 [Bacteroides stercoris ATCC
           43183]
          Length = 574

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 43/293 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F++++D  G  QV    D  C     E+  +V    +     +
Sbjct: 55  VSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPGEDKEMYNTVFKRLLDLGDFI 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I+G V              G+I + AQK+ +L+ + + PLP+        +   + PE 
Sbjct: 115 GIEGFVFRTQM---------GEISIHAQKLTVLAKSIK-PLPIVKYKDGVAYDSFDDPE- 163

Query: 124 IRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDF 180
           +R++ R++DL   D + +  +KR  II +MR  +    + E  TPIL  S P G  AR F
Sbjct: 164 LRYRQRYVDLIVNDGVKETFLKRATIIKTMRAVLDEAGYTEVETPIL-QSIPGGASARPF 222

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ 
Sbjct: 223 ITHHNSLDMDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-EFTCMELY 280

Query: 241 MSFVEQDDILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
           + + + + ++   E +L        G  E   +G T+S    + R+   DAI+
Sbjct: 281 VQYKDYNWMMGFTEKLLERICIAVNGSTETTIDGKTISFKAPYRRLPILDAIK 333



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A Q GMPP  GI  GIDR+ ML+ G   ++EV  FP
Sbjct: 460 KALQYGMPPTSGIGIGIDRLTMLMTGQAFIQEVLFFP 496


>gi|118468939|ref|YP_888089.1| lysyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118170226|gb|ABK71122.1| lysyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 1089

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 10/214 (4%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           LG +D G  + ++G V R+R +GG++F  +RD  G  Q++   D+A     ++      +
Sbjct: 639 LGATD-GETLSVAGRVMRIRDYGGVLFAQLRDWSGEVQLLL--DNAALTEGETADFTATI 695

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            +  LV    +   + N   G   L  ++  ++      PLP   +    +  R + R++
Sbjct: 696 DLGDLVEVTGSMGFSRN---GTRSLLVERWRLIGKCLR-PLPDKWKGLTDQEARVRARYV 751

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +T  +++++ R+  ++++R  + ++ F+E  TPIL        AR FL        
Sbjct: 752 DLAVNTEARDLIRARSGALHAIRETLYSKGFLEVETPILQQIHGGANARPFLTHINAYDL 811

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             Y L  AP+ Y + L   G +R F++   FR+E
Sbjct: 812 DLY-LRIAPELYLKRLCVGGVERVFELGRAFRNE 844



 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +
Sbjct: 997  AERWDLVAWGVELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAME 1052

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  G+DR+VM++ G +++RE   FP+++
Sbjct: 1053 YAMPPTGGLGMGVDRVVMMITG-RSIRETLPFPLAK 1087


>gi|52842004|ref|YP_095803.1| lysine tRNA synthetase, heat inducible [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|148359321|ref|YP_001250528.1| lysine tRNA synthetase [Legionella pneumophila str. Corby]
 gi|296107368|ref|YP_003619068.1| lysyl-tRNA synthetase, class II [Legionella pneumophila 2300/99
           Alcoy]
 gi|81377301|sp|Q5ZUL6|SYK_LEGPH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229810|sp|A5ICT2|SYK_LEGPC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|52629115|gb|AAU27856.1| lysine tRNA synthetase, heat inducible [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|148281094|gb|ABQ55182.1| lysine tRNA synthetase, heat inducible [Legionella pneumophila str.
           Corby]
 gi|295649269|gb|ADG25116.1| lysyl-tRNA synthetase, class II [Legionella pneumophila 2300/99
           Alcoy]
 gi|307610477|emb|CBX00049.1| hypothetical protein LPW_18041 [Legionella pneumophila 130b]
          Length = 496

 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 129/283 (45%), Gaps = 27/283 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V ++G +   R  G   F  I+D  G  QV   +N     +E  K     W L   G ++
Sbjct: 63  VSVAGRIVLRRIMGKASFFHIQDVSGRIQVYLRSNDLPDIYEQFKH----WDL---GDIV 115

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
               E    N  TG++ ++A+ +E+L+ +   PLP        + ++++ R++DL   + 
Sbjct: 116 GVQGELFKTN--TGELTINAEHVELLTKSLR-PLPDKFHGLADQELKYRKRYVDLIANED 172

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALP 195
             K  + R+ +I + R  M   +F+E  TP++    P GA  R F+        + Y L 
Sbjct: 173 SRKTFLIRSHLIKAFREFMDDNHFLEVETPMM-HPIPGGALARPFVTHHNTLDMTMY-LR 230

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF+R ++I   FR+E   +   P EF  L+   ++ + +D++N  E 
Sbjct: 231 IAPELYLKRLVVGGFERVYEINRNFRNEGISTRHNP-EFTMLEFYQAYADYNDLMNFTEQ 289

Query: 256 VLRGVFEEF-------SNGNTVSNN--FLRICYDDAIRRYGTD 289
           +   + ++          G  +  N  F R+   +AI +Y  D
Sbjct: 290 LFHYLCDKVLATRQIEYQGQVIDFNKPFERLSVKEAILKYHPD 332



 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 11/90 (12%)

Query: 485 VCNGFE--IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---------YRAFQCGM 533
           V + FE  IA   I N  SE+           K+V E   G L           A + G+
Sbjct: 403 VTDRFEFFIAGREIANGFSELNDAEDQAERFRKQVEEKDAGDLEAMHFDSDYIEALEYGL 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           PP  G   GIDR+VML   ++++R+V LFP
Sbjct: 463 PPTAGEGIGIDRLVMLFTNSQSIRDVILFP 492


>gi|322712664|gb|EFZ04237.1| aspartyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 567

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 3/118 (2%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           R  +    R  + +  F E   P L  ++ EG  +    +   + +F A  Q+PQ YKQ 
Sbjct: 245 RIEVKRLFRSYLDSRGFKEFEPPCLIGAASEGGGNVFRLAYFGEEAFLA--QSPQFYKQF 302

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVF 261
            +A G +R F I P FR E+  + R   EF  LD+EM   E   ++++T+E VL  +F
Sbjct: 303 EIAGGRERVFSIGPVFRAENSNTPRHMTEFTGLDLEMEIKESYTEVISTLEGVLLSIF 360


>gi|261885903|ref|ZP_06009942.1| aspartyl-tRNA synthetase [Campylobacter fetus subsp. venerealis
          str. Azul-94]
          Length = 60

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 37/53 (69%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
          R+H C DL  +D+G  V+L GWV+  R HGG+IF+D+R   GI Q+V +P+ +
Sbjct: 2  RSHYCTDLSSNDIGKIVQLCGWVNSYRDHGGVIFIDLRYRSGIIQLVCDPEDS 54


>gi|194334315|ref|YP_002016175.1| lysyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194312133|gb|ACF46528.1| lysyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 514

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 127/310 (40%), Gaps = 51/310 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77
           V ++G +  VR  G   F +I+D  G  QV    D      + I K +    ++ + G  
Sbjct: 70  VSVAGRIMAVRKMGKASFFNIQDAKGRIQVYMKRDDVGQDAYRIFKLLDIGDIVGVKGFT 129

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----------ESIRF 126
                        TG+I + A++  +LS +   P+PV  E+E             + +R+
Sbjct: 130 FRTK---------TGEISIHAEEFMLLSKSLR-PIPVAKEKEVDGQKVTYDAFSDKELRY 179

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPS 184
           + R++DL  +   +N  VKR+ I+  MR     + ++E  TPIL        AR F    
Sbjct: 180 RQRYVDLIVNPEVRNTFVKRSAIVTFMRTFFSEKGYLEVETPILQPVYGGAAARPFTTHH 239

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDMEMSF 243
                  Y L  A + Y + L+  GFD  F+ A  FR+E    DR    EF Q+++   +
Sbjct: 240 NALDMELY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEG--IDRFHNPEFTQVEL---Y 293

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN------------FLRICYDDAIRRY----- 286
           V   D    ME V + ++      N   N             F R+   DAI +Y     
Sbjct: 294 VAYKDYYWMMELVEQLIYRANLAVNNSENTTFLDNEISLKPPFTRLSIADAIMQYCDRDI 353

Query: 287 -GTDKPDLRN 295
            G  + +LRN
Sbjct: 354 SGKSESELRN 363



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  GIDR+VMLL G +++R+V  FP
Sbjct: 473 RALEYGMPPCAGLGIGIDRLVMLLCGEESIRDVIFFP 509


>gi|304569719|ref|YP_011589.2| lysyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
          Length = 514

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 130/296 (43%), Gaps = 25/296 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  V +   ++G +   R  G + F  I D  G  Q  A  +    E  K+ +   +  I
Sbjct: 71  LETVDAAFTMAGRIVSHRSFGKVAFFHIMDRTGRMQCYAAREELGEEAYKTFKKLDIGDI 130

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLD 132
            G V  R   T      TG++ LS  ++ +L+ +   LP    G ++    IR++ R++D
Sbjct: 131 VG-VSGRLFRTK-----TGELTLSCTEVRLLTKSIRPLPEKYHGLKDV--EIRYRQRYVD 182

Query: 133 LRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQG 189
           L      ++I  KRT I+   R  + A  F+E  TP++ A  P GA  + F+        
Sbjct: 183 LIVTPRARDIFRKRTIIVREFRRFLEARGFMEVETPMMQAI-PGGATAKPFVTFHNALDM 241

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y +  AP+ Y + L+  GF++ F+I   FR+E   +   P EF   +   ++   +D+
Sbjct: 242 QLY-MRIAPELYLKRLLVGGFEKVFEINRNFRNEGISTQHNP-EFTMCEFYWAYATFEDL 299

Query: 250 LNTMENVLRGVFEEFSNGNTVS----------NNFLRICYDDAIRRYGTDKPDLRN 295
           ++  E +   +  E    + ++            ++R+ + +++ + G   P+  N
Sbjct: 300 MDLTEELFSHIAREVCGSSVITYQGQEVDLTPGKWVRLTFHESLEKVGGHSPEFYN 355



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL  + ++REV LFP+
Sbjct: 472 RALEYGMPPAAGQGVGIDRLVMLLTDSPSIREVILFPL 509


>gi|292557973|gb|ADE30974.1| Lysyl-tRNA synthetase, class-2 [Streptococcus suis GZ1]
          Length = 500

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 19/261 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
           +Y   S  DL   ++G    ++G +   R  G   F  I+D  G  Q+    D      +
Sbjct: 47  QYEDKSKEDL--EELGQTAIIAGRIMTKRGKGKAGFAHIQDREGQIQIYVRKDDVSEENY 104

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           EI K       + ++G V   +          G++ + A+K+  LS A   PLP      
Sbjct: 105 EIFKKADLGDFIGVEGDVFKTNV---------GELSIHARKLTHLSKALR-PLPEKFHGL 154

Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                R++ R+LDL   R++  +  V R++II+ +R  +    F+E  TP+L   +   A
Sbjct: 155 TDIETRYRKRYLDLITNRESFDR-FVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAA 213

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
               +     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +
Sbjct: 214 ARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSI 272

Query: 238 DMEMSFVEQDDILNTMENVLR 258
           ++  ++ +  DI++  E +++
Sbjct: 273 EVYQAYADYQDIMDLTEGIIQ 293



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L+ F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LERFEAQAKAKELGDDEATGVDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|229175266|ref|ZP_04302781.1| Asparaginyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608098|gb|EEK65405.1| Asparaginyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 463

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 129/327 (39%), Gaps = 61/327 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V  +
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSSV-KV 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           +G V++               E+ A+KI+I  +++    P+  +R   E +R       L
Sbjct: 76  EGTVIATPG-------AKQPFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T   +   R R + +       +   F+   TPI+T S  EGA +     RV   + 
Sbjct: 125 RPRTNAFSATFRVRSVAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQNL 181

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             +P+                       Q      A  F   +   P FR E+  + R  
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLR--------------GVFEEFSN-------GNTV 270
            EF+ ++ E++F E  D+++  E++L+                F  F +        N +
Sbjct: 242 AEFWMVEPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVI 301

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F RI Y +AI+       D + P+
Sbjct: 302 NSDFGRITYTEAIKVLQESGADFKYPV 328


>gi|54294664|ref|YP_127079.1| hypothetical protein lpl1741 [Legionella pneumophila str. Lens]
 gi|81368463|sp|Q5WVS0|SYK_LEGPL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|53754496|emb|CAH15980.1| hypothetical protein lpl1741 [Legionella pneumophila str. Lens]
          Length = 496

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 129/283 (45%), Gaps = 27/283 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V ++G +   R  G   F  I+D  G  QV   +N     +E  K     W L   G ++
Sbjct: 63  VSVAGRIVLRRIMGKASFFHIQDVSGRIQVYLRSNDLPDVYEQFKH----WDL---GDIV 115

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
               E    N  TG++ ++A+ +E+L+ +   PLP        + ++++ R++DL   + 
Sbjct: 116 GVQGELFKTN--TGELTINAEHVELLTKSLR-PLPDKFHGLADQELKYRKRYVDLIANED 172

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALP 195
             K  + R+ +I + R  M   +F+E  TP++    P GA  R F+        + Y L 
Sbjct: 173 SRKTFLIRSHLIKAFREFMDDNHFLEVETPMM-HPIPGGALARPFVTHHNTLDMTMY-LR 230

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF+R ++I   FR+E   +   P EF  L+   ++ + +D++N  E 
Sbjct: 231 IAPELYLKRLVVGGFERVYEINRNFRNEGISTRHNP-EFTMLEFYQAYADYNDLMNFTEQ 289

Query: 256 VLRGVFEEF-------SNGNTVSNN--FLRICYDDAIRRYGTD 289
           +   + ++          G  +  N  F R+   +AI +Y  D
Sbjct: 290 LFHYLCDKVLATRQIEYQGQVIDFNKPFERLSVKEAILKYHPD 332



 Score = 43.9 bits (102), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 11/90 (12%)

Query: 485 VCNGFE--IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---------YRAFQCGM 533
           V + FE  IA   I N  SE+           K+V E   G L           A + G+
Sbjct: 403 VTDRFEFFIAGREIANGFSELNDAEDQAERFRKQVEEKDAGDLEAMHFDSDYIEALEYGL 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           PP  G   GIDR+VML   ++++R+V LFP
Sbjct: 463 PPTAGEGIGIDRLVMLFTNSQSIRDVILFP 492


>gi|197121548|ref|YP_002133499.1| lysyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|220916312|ref|YP_002491616.1| lysyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|238689875|sp|B4UGU5|SYK_ANASK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|254782468|sp|B8JFW2|SYK_ANAD2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|196171397|gb|ACG72370.1| lysyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|219954166|gb|ACL64550.1| lysyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 513

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 21/257 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVMS 79
           L+G V  VR  G   FL +RD     QV    D      FE+ K      +L I  +V  
Sbjct: 65  LAGRVLAVRSFGKAAFLRVRDRSAELQVWVKKDRVGEQAFEVFK------LLDIGDIV-- 116

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTL 138
             AE       TG++ L A+   IL+ A   PLP           R++ R++DL     +
Sbjct: 117 -GAEGPATRTKTGELTLEARTFTILTKATR-PLPEKWHGLTDVEQRYRQRYVDLVVTPGV 174

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV-PSRVNQGSF---YAL 194
            +  VKR RI++ +R  + A  ++E  TP L    PE A      P   +  +      L
Sbjct: 175 REAFVKRARIVSGIRRFLDARGYLEVETPTL--HKPEEAGGAAARPFETHHNALDLDLKL 232

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G DR ++I   +R+E       P EF  ++   ++   +D++   E
Sbjct: 233 RIATELHLKRLVVGGLDRVYEIGRIWRNEGIDRRHNP-EFTSIEFYQAYATHEDLMRLTE 291

Query: 255 NVLRGVFEEFSNGNTVS 271
            ++  +  E + G  V+
Sbjct: 292 ELMHRLAVEVTGGPVVT 308



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 27/41 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           RA + GMPP  G   GIDR+ ML   + ++R+V LFP+ ++
Sbjct: 471 RALEHGMPPTAGEGIGIDRLAMLFTDSASIRDVILFPLLKS 511


>gi|325913193|ref|ZP_08175563.1| lysine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325477614|gb|EGC80756.1| lysine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 503

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 23/273 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            R++G +   R  G + F DI D  G  Q+    D      ++I K       L I+G V
Sbjct: 60  TRVAGRMLAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYQIFKQADLGDFLGIEGHV 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--R 134
           M            TG++ + A  I  LS A   PLP  +   +  E I ++ R+LDL   
Sbjct: 120 MKTD---------TGELTIRASHITFLSKALR-PLPDKYHGLQNVEQI-YRQRYLDLISN 168

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
           +D+ +K  + RT+II ++R  + + +F+E  TP+L  + P G  AR F+        + Y
Sbjct: 169 QDS-YKRFLNRTKIIQAIRDYLNSLDFLEVETPVL-HNIPGGAEARPFITHHNALDINLY 226

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                    K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++ 
Sbjct: 227 MRIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELETYCAYWDFHDVMDE 284

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            E ++R   +  S    ++     I    + RR
Sbjct: 285 AEGIIRAAAKVVSEDGKINYQGTDIDLGKSFRR 317



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 2/47 (4%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM--SQNFCDL 571
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP    + F DL
Sbjct: 453 RAMEFGMPPTGGLGIGIDRLVMLLTNAPAIRDVLLFPTMRPERFDDL 499


>gi|323453878|gb|EGB09749.1| hypothetical protein AURANDRAFT_71352 [Aureococcus anophagefferens]
          Length = 864

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 109/264 (41%), Gaps = 36/264 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           VG+   + GW   VR    + FL++ D   +G  Q V   ++A  E+ K+V +   + ++
Sbjct: 55  VGTRTVIKGWARTVRAQKALGFLEVNDGSSFGGLQCVFEGEAALKEL-KAVSTGCAVAVE 113

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G +++   +          IEL A+ +E++   EE   P+  +R   E +R     L  R
Sbjct: 114 GEIVTSGGKQA--------IELKAETLEVVGGCEE-GYPLQKKRHSLEFLR-SIAHLRPR 163

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +TL      R+ +  +       E F    +PI+TAS  EGA +     RV   S  AL
Sbjct: 164 TNTLAAAARLRSCLAQATHRFFEQEGFAYVHSPIITASDCEGAGEMF---RVTSLSGDAL 220

Query: 195 PQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            +A                      Q      A      +   P FR E+ ++ R   EF
Sbjct: 221 AKAATKENGFEDDFFARSAFLTVSGQLSAETYACAMGDVYTFGPTFRAENSQTSRHLAEF 280

Query: 235 YQLDMEMSFVEQDDILNTMENVLR 258
           + ++ EM+F    + ++  E +L+
Sbjct: 281 WMIEPEMAFATITEAMDNAEALLK 304


>gi|319654915|ref|ZP_08008989.1| lysyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317393340|gb|EFV74104.1| lysyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 496

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 128/285 (44%), Gaps = 29/285 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V L+G +   R  G   F  I+D  G  Q+    D+     + I +S     ++ + G +
Sbjct: 62  VTLAGRIMTKRGKGKAGFAHIQDLSGQIQIYIRKDAVGEENYAIFESADLGDIIGVSGTL 121

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RR 135
                         G++ + AQ+ ++L+ +   LP    G ++  +  R++ R+LDL   
Sbjct: 122 FKTKV---------GELSVKAQEFDLLTKSLRPLPDKFHGLKDVEQ--RYRQRYLDLIMS 170

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
           +   +  + R+RII SMR  + +  ++E  TP++ + +    AR F+          Y +
Sbjct: 171 EESKQTFITRSRIIQSMRRYLDSHGYLEVETPMMHSIAGGASARPFITHHNALDMELY-M 229

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++  E
Sbjct: 230 RIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYRDIMSLTE 288

Query: 255 NVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY-GTD 289
           N++  + +E     +V            + R+   DAI+ Y G D
Sbjct: 289 NLIAHIAQEVLGTTSVQYGEYEVDLKPEWKRLHMVDAIKEYTGVD 333



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 28/37 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP+
Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPL 492


>gi|254169005|ref|ZP_04875844.1| asparaginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622111|gb|EDY34687.1| asparaginyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 430

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 32/295 (10%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAK 63
           H    L    +G  V L GW++R R  G IIF+ +RD   I Q V       +  F+   
Sbjct: 4   HISDVLSYDFIGKEVSLRGWIYRKRRMGKIIFVVLRDSSDIIQCVIEKKKIGNEKFKELD 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V  E  L I+G++             TG  E+  + + I+  +   P+     ++  + 
Sbjct: 64  KVGVESSLEINGVIRKEERAP------TG-YEVDVKDVNIVGPSYLFPIT----KDKSDE 112

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
                R L LR   ++  +  R  +  ++        + E   PI    + EG       
Sbjct: 113 FLLDNRHLWLRSREMNAILKIRHTVFGAIHEFFRENGYYEVQGPIFVTGAVEGGSTLFEV 172

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++  L Q+ Q Y +  + S  +R + IAP FR E  R+ R   E++  + E+++
Sbjct: 173 PYFGKKAY--LSQSAQFYLETFIFS-LERVYTIAPSFRAEKSRTRRHLTEYWHAEGEVAW 229

Query: 244 VEQDDILNTME----NVLRGVFEE------FSNGN-----TVSNNFLRICYDDAI 283
              +D++   E    ++++ V EE      F N +      +   F+R+ YD+ I
Sbjct: 230 YHNEDMMRDEEELIMHIVQKVLEEREKELKFLNRDLEILKDLEKPFIRMKYDELI 284


>gi|281490916|ref|YP_003352896.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281374674|gb|ADA64194.1| Lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 494

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 28/277 (10%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    D      +EI K       L ++G +M 
Sbjct: 63  VAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDEVGEENYEIFKKADLGDFLGVEGEIMK 122

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDT 137
                       G++ + A+K+  LS A   PLP           R++ R+LDL   +++
Sbjct: 123 TD---------MGELSIKAKKLTFLSKALR-PLPEKFHGLTDTETRYRKRYLDLISNKES 172

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
             +  V R++II+ +R  M    F+E  TPIL + +    AR F            AL  
Sbjct: 173 FDR-FVTRSKIISEIRHYMDGRGFLEVETPILHSEAGGAAARPFFTHHNTLDIDM-ALRI 230

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G ++ ++I   FR+E   +   P EF  L+   ++ +  D+++  E +
Sbjct: 231 ALELHLKRLIVGGMEKVYEIGRVFRNEGMDTTHNP-EFTMLESYEAYADFHDVMDLTEGI 289

Query: 257 L---------RGVFEEFSNGNTVSNNFLRICYDDAIR 284
                     + V E       V   F R+   DAI+
Sbjct: 290 FQHVAKTVVGQDVLEYDGKEINVGGKFKRVHMVDAIK 326



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 14/92 (15%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEV-----MLQAFSNVGISKEVVENRFGGL----YRAFQC 531
           +++L  NG E A     N  SE+      L+ F     +KE+ ++   G+      A + 
Sbjct: 405 RFELFINGKEYA-----NAFSELNDPIDQLERFEAQAKAKELGDDEATGVDYDYVEALEH 459

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP GG+  GIDR+VML  G  ++R+V LFP
Sbjct: 460 GMPPTGGLGIGIDRLVMLFTGTTSIRDVLLFP 491


>gi|292625063|ref|XP_696748.3| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic [Danio rerio]
 gi|220678632|emb|CAX13723.1| novel protein similar to vertebrate asparaginyl-tRNA synthetase
           (NARS) [Danio rerio]
          Length = 556

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 26/247 (10%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V++ GWVHR+R  G  ++F+ +RD  G  Q V   D  C             C +GLV+S
Sbjct: 136 VKVFGWVHRLRRQGKNLLFIVLRDGTGFLQCVLT-DKLC------------QCYNGLVLS 182

Query: 80  RSAETINANIIT---------GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             +       +          G  EL     E++ +A           E    ++   R 
Sbjct: 183 TESSVALYGTVKPVPEGKQAPGGHELHCDFWELVGLAPAGGADNLLNEESDVDVQLNNRH 242

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           + +R + + K +  R+ +    R    +  + E + P L  +  EG       +   + +
Sbjct: 243 MMIRGENVSKILKVRSAVTQCFRDHFFSRGYCEITPPTLVQTQVEGGSTLFGLNYFGENA 302

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  +D+L
Sbjct: 303 Y--LTQSSQLYLETCIPALGDT-FCIAQSYRAEQSRTRRHLSEYTHIEAECPFMSYEDLL 359

Query: 251 NTMENVL 257
           N +E+++
Sbjct: 360 NRLEDLV 366


>gi|78223615|ref|YP_385362.1| asparaginyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|123770257|sp|Q39SY7|SYN_GEOMG RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|78194870|gb|ABB32637.1| Asparaginyl-tRNA synthetase, class IIb [Geobacter metallireducens
           GS-15]
          Length = 461

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 107/266 (40%), Gaps = 29/266 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           L    +G+ + + GWV  +R    + FL + D   +   QVVA P  A F    ++ +  
Sbjct: 11  LAGEGLGNEIMVKGWVRTIRTGKEVAFLALNDGSCFANLQVVAEPGLATFADVCAIGTGA 70

Query: 70  VLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            + + G ++   A        +GQ  EL A ++ ++ +A+E   P+  +R   E +R   
Sbjct: 71  AVAVRGRLVDSPA--------SGQCYELHADEVAVIGLADE-SYPLQKKRHSFEYLR-SI 120

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +T       R+ +  ++        F+   TPI+T S  EGA +    + ++ 
Sbjct: 121 AHLRPRSNTFGAVFRVRSSVAQAVHRFFAERGFLYVHTPIITTSDCEGAGEMFRVTTLDP 180

Query: 189 GS-------------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPG 232
            +             F+A         QL   L A  F   +   P FR E+  + R   
Sbjct: 181 AAPPLLEGEVDFSRDFFAAQAGLTVSGQLEGELFAQAFSDIYTFGPTFRAENSNTPRHAA 240

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLR 258
           EF+ ++ EM+F +        E   R
Sbjct: 241 EFWMIEPEMAFADLMADAALAEEFFR 266



 Score = 38.1 bits (87), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF---QCGMPPHGGIAAGIDRI 546
           EI  G  R     V+    + VG++ E       GL+      + G  PH G   G +R+
Sbjct: 384 EIIGGSQREERLPVLEGRMAEVGVNPE-------GLWWYLDSRRWGSTPHAGFGLGFERL 436

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDL 571
           +M L G +N+R+V  FP +    + 
Sbjct: 437 IMYLTGMENIRDVIPFPRTPRHAEF 461


>gi|238787317|ref|ZP_04631116.1| Lysyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238724579|gb|EEQ16220.1| Lysyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 505

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 115/245 (46%), Gaps = 12/245 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+  + D     +      +W L   G ++  
Sbjct: 68  VTVAGRMMTRRIMGKASFVTLQDVGGKIQLYVSRDDLPEGVYNEEFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 RGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  K R+++++ +R  M+ + F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 HTFKVRSQVMSGIRRFMVEKGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E + 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELF 298

Query: 258 RGVFE 262
           R + E
Sbjct: 299 RTLTE 303



 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EI +G    + +E   Q F++   +KE  ++    +   Y  A + G+PP 
Sbjct: 413 RFEFFIGGREIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VML   +  +R+V LFP
Sbjct: 473 AGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|303390853|ref|XP_003073657.1| asparagine-tRNA ligase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302804|gb|ADM12297.1| asparagine-tRNA ligase [Encephalitozoon intestinalis ATCC 50506]
          Length = 447

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 21/266 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y+      L   ++G  +R  GWV  VR    I F+D+  HY   + V            
Sbjct: 17  YKRIELSKLTKENIGQKIRTFGWVTNVRSQSSITFIDLYAHYKTVKCVYPK--------- 67

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL--SVAEELPLPVFGEREYP 121
             +    +C    +    AE         + E+  +K+EI   ++A   PL      E  
Sbjct: 68  --KMHLTMCTSMTIYGTVAENFGKK-DAYEFEIQVEKVEIYNDAIAPSFPL----NEESS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +       L LR       +  R  ++  +R    A+ + E + P +  +  EG     
Sbjct: 121 VNAILTNAHLALRTKKRQLFLKARGYLLKIIRDFYFAKEYTEITPPTMVQTQVEGGSTLF 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + ++  L Q+ Q Y + ++     R + I P +R E  R+ R   E+  ++ E+
Sbjct: 181 KLDYYGEDAY--LTQSSQLYLETVVPVS-HRAYCIMPSYRAEKSRTRRHLSEYTHVEAEL 237

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNG 267
           + ++  ++++++E+++    E+F  G
Sbjct: 238 ADIDFSELMSSIESLISYSMEKFYEG 263


>gi|269925130|ref|YP_003321753.1| lysyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269788790|gb|ACZ40931.1| lysyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 497

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 133/289 (46%), Gaps = 36/289 (12%)

Query: 4   YRTHSCGDLGVSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-----ANP 54
           YRTH+  ++  S V S     V ++G +   R  G  +F D+ D  G  Q++     A P
Sbjct: 38  YRTHTAHEV-YSSVDSLEGQEVTVAGRLTARRDMGKSVFADLEDASGKIQLLVRLNTAGP 96

Query: 55  DSACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPL 112
           D+  F         +   ID G ++  +   +     TG+  +  + + IL+ V   LP 
Sbjct: 97  DTLSF---------FKELIDLGDIVEATGSPMRTR--TGEPTVDVKSVRILAKVLNPLPD 145

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA 171
              G  +  +  R++ R+LDL  +   +++ +KR +II+S+R  +    FIE  TP+L  
Sbjct: 146 KWHGLEDVEK--RYRQRYLDLMVNPEVRDVFIKRAKIISSVRRYLDDLGFIEVETPVLQP 203

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 A+ F         +FY L  A + Y + L+  G ++ ++I   FR+E   +   
Sbjct: 204 LYGGASAKPFTTYYNALDQTFY-LRIATELYLKRLLVGGIEKVYEIGKDFRNEGLSTKHN 262

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           P EF  +++  ++ + + I++ +E ++      F+  N +    L+I Y
Sbjct: 263 P-EFTMMELYQAYADYNSIMDLVEKLI-----TFTASNVLQT--LKITY 303



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A   GMPP GG+  GIDR+VMLL    ++R+V LFP
Sbjct: 450 QALMYGMPPTGGLGIGIDRLVMLLTDRPSIRDVILFP 486


>gi|195130335|ref|XP_002009607.1| GI15452 [Drosophila mojavensis]
 gi|193908057|gb|EDW06924.1| GI15452 [Drosophila mojavensis]
          Length = 554

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 118/249 (47%), Gaps = 22/249 (8%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           + ++G +H +R  G  +IF D+R      QV+A+        AKS +SE     D   + 
Sbjct: 111 LSVAGRIHAIRESGAKLIFYDLRGEGVKLQVMAS--------AKSYKSEAAFEQDTAKLR 162

Query: 80  RSAETINAN-----IITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           R  + I  N        G++ +   ++++LS     LP   FG ++  +  R++ R+LDL
Sbjct: 163 R-GDIIGVNGHPGKTKKGELSIMPTELKLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 219

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              + + +N   R +II+ +R  +    F+E  TP++   +    A+ F+      +   
Sbjct: 220 ILNNKVRENFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNELKMDL 279

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + +  AP+ Y ++++  G DR ++I   FR+E       P EF   +  M++ +  D++ 
Sbjct: 280 F-MRIAPELYHKMVVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYYDLIE 337

Query: 252 TMENVLRGV 260
             E +L G+
Sbjct: 338 ITEQMLSGM 346


>gi|126652720|ref|XP_001388377.1| aspartate--tRNA ligase [Cryptosporidium parvum Iowa II]
 gi|126117470|gb|EAZ51570.1| aspartate--tRNA ligase [Cryptosporidium parvum Iowa II]
          Length = 532

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 124/290 (42%), Gaps = 36/290 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L  +  G  + L G +   R  G + F+ +R  +   Q+V + ++     +     +W+
Sbjct: 78  ELNSNQKGEKIWLRGRITESRCKGSLGFVLLRQTFYRLQLVVDANNG----SSKEMIKWL 133

Query: 71  LCID--------GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFG----E 117
            C+         G ++      +++   T  IE+  +++  +S A  ELP  +      E
Sbjct: 134 GCLPIESMIDVYGTIVVPETPVVSS---TQDIEVLVERVYCVSSACSELPFQLKDANRVE 190

Query: 118 REYPES--------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-I 168
            E  +S        +R   R LDLR          ++ +   +R  +I   FIE  TP +
Sbjct: 191 TEDEDSTIIKVLQDVRLDNRVLDLRTYLSQAIFRIQSEVCRLLREFLIEREFIEIHTPKL 250

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L  +S  GA  F V    N      L Q+PQ +KQ+ +    +R F+I P FR E+  + 
Sbjct: 251 LPGASESGATVFKVDYFSNTA---CLAQSPQLHKQMSICGDLERVFEIGPVFRAENSNTH 307

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG-NTVSNNFLRI 277
           R   EF  +D+EM+    ++  + + +V   +F     G NT   N L I
Sbjct: 308 RHLCEFVGVDIEMNI---ENTYHELVDVFDAMFRHIFQGINTHCKNELLI 354



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D    G EI SG  R H  +++++     G+S    E+       +F+ G PPHGG   
Sbjct: 447 FDFFMRGEEILSGAQRVHDYDLLVKRCQECGVS----EHSLRDYLNSFKLGAPPHGGCGI 502

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++ML L   N+R+ S+FP
Sbjct: 503 GLERVIMLFLNLGNIRKSSMFP 524


>gi|294934243|ref|XP_002781041.1| lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239891231|gb|EER12836.1| lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 482

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 88/174 (50%), Gaps = 7/174 (4%)

Query: 92  GQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRII 149
           G++ +   +I +LS     LP   FG ++  + +RF+ R+LDL  +  + +   +R++II
Sbjct: 193 GELSIFPSEIRLLSTCMHMLPKAQFGLKD--QEVRFRQRYLDLIMNPHVRETFQRRSQII 250

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R  +    F+E  TP++   +    A+ F+          Y +  AP+ Y ++L+  
Sbjct: 251 GYIRSFLGNRGFMEVETPMMNMIAGGASAKPFITHHNELDLDLY-MRIAPELYLKMLVVG 309

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           G DR F+I   FR+E       P EF   +  M++ + +D++N  E ++ G+ +
Sbjct: 310 GLDRVFEIGKNFRNEGIDLTHNP-EFTSCEFYMAYADYNDLMNMTEEMISGMVK 362


>gi|24640849|ref|NP_572573.1| Lysyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|19528341|gb|AAL90285.1| LD23509p [Drosophila melanogaster]
 gi|22832013|gb|AAN09255.1| Lysyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|220944834|gb|ACL84960.1| Aats-lys-PA [synthetic construct]
 gi|220954614|gb|ACL89850.1| Aats-lys-PA [synthetic construct]
          Length = 574

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 20/248 (8%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           + ++G VH +R  G  +IF D+R      QV+A+        AKS +SE    ID   + 
Sbjct: 109 LSVAGRVHAIRESGAKLIFYDLRGEGVKVQVMAS--------AKSYKSEADFEIDTSKLR 160

Query: 80  RSAETIN-----ANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           R  + I           G++ +   +I++LS     LP   FG ++  +  R++ R+LDL
Sbjct: 161 R-GDIIGVVGHPGKTKKGELSVMPSEIKLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 217

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
              + + +    R +II+ +R  +    F+E  TP++   +        V    +     
Sbjct: 218 ILNNNVREKFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNDLKMDL 277

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  DI++ 
Sbjct: 278 FMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYADIMDI 336

Query: 253 MENVLRGV 260
            E ++ G+
Sbjct: 337 TEQLVSGM 344



 Score = 44.3 bits (103), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 519 SLEYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFP 554


>gi|331268543|ref|YP_004395035.1| asparaginyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125093|gb|AEB75038.1| asparaginyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 463

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 127/327 (38%), Gaps = 61/327 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGWV  +R      F+++ D   +   QVV   +   F EI+K   S  +   
Sbjct: 17  AGQEVKISGWVRTLRASNKFGFIEVNDGSFFKNIQVVFGAELENFKEISKYAISSSISVE 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             +V++ +A+           E+ A+K+ +L    +   P+  +R   E +R       L
Sbjct: 77  GEVVITENAKQ--------PFEIHAKKV-VLEGKSDADYPLQKKRHTFEYLR---SIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  +   + V R R + +       ++  F+   TPI+T S  EGA +     RV     
Sbjct: 125 RPRSNAFSAVFRVRSLAAYAIHKFFQDQGFVYVHTPIITGSDCEGAGEMF---RVTTLDM 181

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             LP+  Q                    Q +  + A  F   +   P FR E+  + R  
Sbjct: 182 DNLPKDEQGNIDYKEDFFGKESNLTVSGQLEAEIYALAFRNVYTFGPTFRAENSNTARHA 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270
            EF+ ++ EM+F E  D ++  E +++ +            EF N            N V
Sbjct: 242 SEFWMIEPEMAFAELKDYMDVAEEMVKYIINYVRENAPEEMEFFNKFIDKGLLERLDNVV 301

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           ++NF RI Y +A+            P+
Sbjct: 302 NSNFARISYTEAVEMLQKSGAKFEYPV 328



 Score = 38.1 bits (87), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G  R    +V+    + +G++KE     +       + G   H G   
Sbjct: 378 DLLVPGIGEIIGGSQREERLDVLEARMAELGLNKE----DYWWYLELRKYGETKHAGYGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +R++M L G  N+R+V  FP +
Sbjct: 434 GFERMIMYLTGMSNIRDVLPFPRT 457


>gi|300780445|ref|ZP_07090301.1| lysyl-tRNA synthetase [Corynebacterium genitalium ATCC 33030]
 gi|300534555|gb|EFK55614.1| lysyl-tRNA synthetase [Corynebacterium genitalium ATCC 33030]
          Length = 508

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 7/164 (4%)

Query: 111 PLPV-FGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
           PLPV F +    E  R +YR+ DL  RD   KN + R ++I ++R  +   +F+E  TP+
Sbjct: 149 PLPVAFADMN--EEQRVRYRYTDLIMRDDARKNALTRIKVIAALRKYLTGLDFVEVETPM 206

Query: 169 L-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L T      AR F   S       Y L  AP+ Y +  +  G DR F+I   FR+E   S
Sbjct: 207 LQTLHGGAAARPFETHSNALDIDLY-LRIAPELYLKRCVVGGIDRVFEINRNFRNEGVDS 265

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
              P EF  ++   ++    D   T++  ++   +E     TV+
Sbjct: 266 SHSP-EFTMMETYQAWGTYKDGAETIKGAVQFCAQEVFGSTTVT 308



 Score = 44.7 bits (104), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        I+    E   +  ++      V++  F     A + GM
Sbjct: 417 KWDLYVRGFELATGYSELVDPVIQRERFEDQARLAADGDDEAMVLDEDF---LAAMEQGM 473

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   GIDR++M L G   +RE  LFPM
Sbjct: 474 PPTAGTGMGIDRLLMALTGL-GIRETVLFPM 503


>gi|320353431|ref|YP_004194770.1| asparaginyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320121933|gb|ADW17479.1| asparaginyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 459

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 103/262 (39%), Gaps = 32/262 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V +SGWV   R  G   FL+I D   +  +    +      A  V+     C    
Sbjct: 15  VGETVTISGWVRTRRDSGSFSFLEINDGSCLANLQLIAEEQLVNYASEVKKLTTGC---- 70

Query: 77  VMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
              R+   + A+   GQ +E+ A++IE++  A+    P+  +R    S  F      LR 
Sbjct: 71  -SLRAHGLLVASPAKGQTVEVRAERIEVIGWADPETYPLQKKR---HSFEFLRSIAHLRP 126

Query: 136 DTLHKNIVKRTRIINSMRC-RMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            T     V R R   S    R   E+ F++  TP++T S  EGA +    + +  G    
Sbjct: 127 RTNALGAVARVRSALSFAIHRFFHEHGFLQVHTPVITTSDCEGAGEMFTVTALEPGQL-- 184

Query: 194 LPQAPQ-----------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             Q P                  Q +  + A    R +   P FR E   + R   EF+ 
Sbjct: 185 --QGPDPFNNDFFGRRAGLTVSGQLQAEIFALSHGRVYTFGPTFRAEHSNTSRHLAEFWM 242

Query: 237 LDMEMSFVEQDDILNTMENVLR 258
           L+ EM+F +     +  E++++
Sbjct: 243 LEPEMAFCDLAGNRDVAESLIK 264


>gi|148272033|ref|YP_001221594.1| lysyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147829963|emb|CAN00890.1| lysS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 513

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 6/169 (3%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIIN 150
           G++ + A +  I S A  LPLP     E  +  R + R+LDL  RD   KN++ R ++  
Sbjct: 148 GELSIMAAEWRIASKAL-LPLPNL-HSELSDETRVRSRYLDLIVRDQARKNVLDRAKVNA 205

Query: 151 SMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
           SMR       ++E  TP+L        AR F+  S       Y L  AP+ Y +  +  G
Sbjct: 206 SMRETFRQRGYVEVETPMLQVMHGGASARPFVTHSNAFDTEMY-LRIAPELYLKRAVVGG 264

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            DR F+I   FR+E   S   P EF  L+   ++ +   I    + +++
Sbjct: 265 IDRVFEINRNFRNEGADSTHSP-EFAMLEAYEAYGDYTSIAELTQTLVQ 312



 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL------YRAFQCGMP 534
           ++DL   GFE+A+G   + + + ++Q    V  +++        +       RA + GMP
Sbjct: 425 KWDLYIRGFELATG--YSELVDPVVQRERFVDQARQSARGDDEAMPLDEEFLRALEHGMP 482

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  G+DR++M + G   +RE  LFP+
Sbjct: 483 PSGGMGMGVDRLLMAITGL-GIRETILFPL 511


>gi|296439733|sp|A0QYV1|LYSX_MYCS2 RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
          Length = 1106

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 10/214 (4%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           LG +D G  + ++G V R+R +GG++F  +RD  G  Q++   D+A     ++      +
Sbjct: 656 LGATD-GETLSVAGRVMRIRDYGGVLFAQLRDWSGEVQLLL--DNAALTEGETADFTATI 712

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            +  LV    +   + N   G   L  ++  ++      PLP   +    +  R + R++
Sbjct: 713 DLGDLVEVTGSMGFSRN---GTRSLLVERWRLIGKCLR-PLPDKWKGLTDQEARVRARYV 768

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +T  +++++ R+  ++++R  + ++ F+E  TPIL        AR FL        
Sbjct: 769 DLAVNTEARDLIRARSGALHAIRETLYSKGFLEVETPILQQIHGGANARPFLTHINAYDL 828

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             Y L  AP+ Y + L   G +R F++   FR+E
Sbjct: 829 DLY-LRIAPELYLKRLCVGGVERVFELGRAFRNE 861



 Score = 43.9 bits (102), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +
Sbjct: 1014 AERWDLVAWGVELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAME 1069

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  G+DR+VM++ G +++RE   FP+++
Sbjct: 1070 YAMPPTGGLGMGVDRVVMMITG-RSIRETLPFPLAK 1104


>gi|71027745|ref|XP_763516.1| aspartyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68350469|gb|EAN31233.1| aspartyl-tRNA synthetase, putative [Theileria parva]
          Length = 604

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 113/264 (42%), Gaps = 22/264 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V  +V + G +H +R  GGI FL +R    + Q V +  S        V+    L  + +
Sbjct: 99  VSQYVWIRGRIHELRGKGGICFLILRQQRELLQCVIDSKSEN-NTKDMVKWTSALSFESV 157

Query: 77  VMSRSAETI-NANII--TGQIELSAQKIEILS-VAEELPLPVFGER--------EYPESI 124
           V       + N  I+  T   ELS  KI  +S  +  LP  +            E P  I
Sbjct: 158 VDVYGKVVVPNTPILSTTSSNELSVSKIYCISRSSTNLPFLLRDANNTDNEEMMENPNVI 217

Query: 125 R------FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           R         R LDLR          ++ +    R  +++ +F+E  TP L   S EG  
Sbjct: 218 RVNQDTRLDNRALDLRCFVNGVIFKIQSAVCQLYREFLLSHDFVEIHTPKLLGGSSEGGS 277

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                   +Q +   L Q+PQ YKQ+ +     R F+I P FR E+  + R   E+  LD
Sbjct: 278 SVFKFKYFDQDA--CLAQSPQLYKQMAICGDLKRVFEIGPVFRAENSNTHRHLCEYVGLD 335

Query: 239 MEMSFV-EQDDILNTMENVLRGVF 261
           MEM  + +  ++++ ++ +L+ VF
Sbjct: 336 MEMEILNDYTEVIDLIDQMLKSVF 359



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 7/101 (6%)

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRF 522
             +E+L   D +S     YD    G EI SG  R H S V L+A +   GI    +++  
Sbjct: 502 NSVETLNAVDSVSWSR-SYDFFMRGEEILSGAQRIHDS-VELEARARACGIDVNTIKDYI 559

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 F+ G  PH G   G++R+VML LG  N+R  S+FP
Sbjct: 560 ----EVFRYGSFPHAGSGIGLERVVMLFLGLTNIRRTSMFP 596


>gi|325916712|ref|ZP_08178969.1| lysyl-tRNA synthetase (class II) [Xanthomonas vesicatoria ATCC
           35937]
 gi|325537061|gb|EGD08800.1| lysyl-tRNA synthetase (class II) [Xanthomonas vesicatoria ATCC
           35937]
          Length = 505

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 129/304 (42%), Gaps = 31/304 (10%)

Query: 5   RTHSCGDL-------------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL              +   G  V+++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPEALEASGRTVKMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  --ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
              N     +   K      ++ ++G  ++R+         TG++ + A  + +L+ +  
Sbjct: 101 LQGNVLGDAYTAFKGWDVGDIVAVEG-GLTRTK--------TGELSVKATALRLLTKSLR 151

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPI 168
            PLP           R++ R++DL      + + +KR++II +MR  + A  F+E  TP+
Sbjct: 152 -PLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPM 210

Query: 169 LTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +    P G  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   
Sbjct: 211 M-HYIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVS 268

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +   P EF  L++  ++    +I++  E V+R   +       V+ +   I    A RR+
Sbjct: 269 TRHNP-EFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVNWDGAAIDLAPAFRRW 327

Query: 287 GTDK 290
             D+
Sbjct: 328 RMDE 331



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASG-----GIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-RAFQCGMP 534
           +++L  NG E+A+G        +  +    Q  +  G   E +   +   Y RA + GM 
Sbjct: 413 RFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMH--YDADYIRALEYGMA 470

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 471 PTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|229917390|ref|YP_002886036.1| lysyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229468819|gb|ACQ70591.1| lysyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 496

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 119/250 (47%), Gaps = 21/250 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V L+G +   R  G + F  I+D  G  Q+    +      F++ KS     ++ + G +
Sbjct: 61  VTLAGRIMTKRGKGKVFFAHIQDVTGQIQIYVRKNDVGDEPFDLFKSSDLGDIVGVKGKL 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--R 134
              +          G++ +  ++ E+L+ A   LP    G ++  +  R++ R+LDL   
Sbjct: 121 FKTNV---------GELSIHVEEFELLTKALRPLPDKYHGLKDVEQ--RYRQRYLDLITN 169

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193
           +D+  +  + R+RII+ +R  +  + ++E  TP+L T +    AR FL          Y 
Sbjct: 170 QDS-RQTFILRSRIISEIRNFLNQKGYLEVETPMLHTIAGGAAARPFLTHHNALDMELY- 227

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ + +DI++  
Sbjct: 228 MRIAIELHLKRLIVGGLERVYEIGRVFRNEGISTRHNP-EFTMIELYEAYADYNDIMDLT 286

Query: 254 ENVLRGVFEE 263
           E ++  V +E
Sbjct: 287 EELVAHVAKE 296



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFP 490


>gi|257468138|ref|ZP_05632234.1| lysyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317062423|ref|ZP_07926908.1| lysyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313688099|gb|EFS24934.1| lysyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 493

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 119/276 (43%), Gaps = 25/276 (9%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLVM 78
           + +G +   R  G  +F  I D  G  Q+    D      FE+   +    ++ ++G + 
Sbjct: 57  KTAGRIMAYRGKGKTLFAHIEDRTGRIQLYLRKDELGDEVFEMVNKIGVGDIVGVEGELF 116

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
                       TG++ L    I++LS     PLP           R++ R++DL     
Sbjct: 117 VTH---------TGELTLRVTSIQLLS-KNIRPLPEKFHGLTDVETRYRKRYVDLIMNKE 166

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
           +    +KRT+II  +R  +  + F+E  TP++        A+ F+          Y +  
Sbjct: 167 VRDTFIKRTQIIKGIRSILDNKGFLEVETPLMHPILGGAAAKPFVTHHNALNVDLY-MRI 225

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  G ++ +++   FR+E   +   P EF  +++  ++ + +D+++  E +
Sbjct: 226 APELYLKRLIVGGLEKVYELGRNFRNEGMSTRHNP-EFTMIELYQAYADFNDMMDLAEEI 284

Query: 257 LRGVFEEF-------SNGNT-VSNNFLRICYDDAIR 284
           +  + +E         NG T V  NF RI   D ++
Sbjct: 285 ITTLAKEVLGTTTVEYNGKTLVLENFKRIHMVDFVK 320



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR++MLL  + ++R+V LFP
Sbjct: 452 ALEYGLPPTGGMGIGIDRLIMLLTQSDSIRDVLLFP 487


>gi|146318173|ref|YP_001197885.1| lysyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146320358|ref|YP_001200069.1| lysyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253751355|ref|YP_003024496.1| lysyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253753256|ref|YP_003026396.1| lysyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253755149|ref|YP_003028289.1| lysyl-tRNA synthetase [Streptococcus suis BM407]
 gi|166230593|sp|A4VZY0|SYK_STRS2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166230595|sp|A4VTP6|SYK_STRSY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|145688979|gb|ABP89485.1| Lysyl-tRNA synthetase (class II) [Streptococcus suis 05ZYH33]
 gi|145691164|gb|ABP91669.1| Lysyl-tRNA synthetase (class II) [Streptococcus suis 98HAH33]
 gi|251815644|emb|CAZ51232.1| lysyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251817613|emb|CAZ55360.1| lysyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251819501|emb|CAR45058.1| lysyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|319757641|gb|ADV69583.1| lysyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 496

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 19/261 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
           +Y   S  DL   ++G    ++G +   R  G   F  I+D  G  Q+    D      +
Sbjct: 47  QYEDKSKEDL--EELGQTAIIAGRIMTKRGKGKAGFAHIQDREGQIQIYVRKDDVSEENY 104

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           EI K       + ++G V   +          G++ + A+K+  LS A   PLP      
Sbjct: 105 EIFKKADLGDFIGVEGDVFKTNV---------GELSIHARKLTHLSKALR-PLPEKFHGL 154

Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                R++ R+LDL   R++  +  V R++II+ +R  +    F+E  TP+L   +   A
Sbjct: 155 TDIETRYRKRYLDLITNRESFDR-FVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAA 213

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
               +     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +
Sbjct: 214 ARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSI 272

Query: 238 DMEMSFVEQDDILNTMENVLR 258
           ++  ++ +  DI++  E +++
Sbjct: 273 EVYQAYADYQDIMDLTEGIIQ 293



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L+ F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LERFEAQAKAKELGDDEATGVDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|311234489|gb|ADP87343.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 527

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 130/296 (43%), Gaps = 25/296 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  V +   ++G +   R  G + F  I D  G  Q  A  +    E  K+ +   +  I
Sbjct: 84  LETVDAAFTMAGRIVSHRSFGKVAFFHIMDRTGRMQCYAAREELGEEAYKTFKKLDIGDI 143

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLD 132
            G V  R   T      TG++ LS  ++ +L+ +   LP    G ++    IR++ R++D
Sbjct: 144 VG-VSGRLFRTK-----TGELTLSCTEVRLLTKSIRPLPEKYHGLKDV--EIRYRQRYVD 195

Query: 133 LRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQG 189
           L      ++I  KRT I+   R  + A  F+E  TP++ A  P GA  + F+        
Sbjct: 196 LIVTPRARDIFRKRTIIVREFRRFLEARGFMEVETPMMQAI-PGGATAKPFVTFHNALDM 254

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y +  AP+ Y + L+  GF++ F+I   FR+E   +   P EF   +   ++   +D+
Sbjct: 255 QLY-MRIAPELYLKRLLVGGFEKVFEINRNFRNEGISTQHNP-EFTMCEFYWAYATFEDL 312

Query: 250 LNTMENVLRGVFEEFSNGNTVS----------NNFLRICYDDAIRRYGTDKPDLRN 295
           ++  E +   +  E    + ++            ++R+ + +++ + G   P+  N
Sbjct: 313 MDLTEELFSHIAREVCGSSVITYQGQEVDLTPGKWVRLTFHESLEKVGGHSPEFYN 368



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL  + ++REV LFP+
Sbjct: 485 RALEYGMPPAAGQGVGIDRLVMLLTDSPSIREVILFPL 522


>gi|113475887|ref|YP_721948.1| asparaginyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110166935|gb|ABG51475.1| asparaginyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 463

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 72/314 (22%), Positives = 124/314 (39%), Gaps = 51/314 (16%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF-EIAKSVRSE 68
           LG     + V + GWV   R      F+++ D   +   QVV NPD   + E  + + + 
Sbjct: 10  LGSGQPDAKVTIQGWVRTKRELKEFAFVEVNDGSCLANLQVVLNPDLPNYQESLQQMNTG 69

Query: 69  WVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             + + G+++   A+        GQ IEL A+ I     A+    P+  +R   E +R  
Sbjct: 70  ASVEMTGILVESPAK--------GQRIELKAESITAYGDADPETYPLQKKRHSFEFLR-T 120

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
              L  R +T       R    N++        F+   TPI+TAS  EGA +    + ++
Sbjct: 121 IAHLRGRTNTYGAVFRVRNTCANAIHQFFQERGFLWVHTPIITASDCEGAGEMFTVTNLD 180

Query: 188 --------------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                            F+   A      Q +  +MA+     +   P FR E+  + R 
Sbjct: 181 LKKIPLTEKQDIDFSQDFFGKSAFLTVSGQLEAEIMATALSNVYTFGPTFRAENSNTSRH 240

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE--------------------FSNGNTV 270
             EF+ ++ EM+F + +  ++  E  L+ +F+                     F   +T+
Sbjct: 241 LAEFWMIEPEMAFCDLEGDMDLAEEFLKYIFKSVLEGCPEDMEFFNKRIDKTVFETADTI 300

Query: 271 SNN-FLRICYDDAI 283
            NN F RI Y +A+
Sbjct: 301 INNSFERITYTEAV 314


>gi|315127589|ref|YP_004069592.1| lysyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315016103|gb|ADT69441.1| lysyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 511

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 140/318 (44%), Gaps = 41/318 (12%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV A+ D     + K +++++     G ++        +    G + + 
Sbjct: 76  FMSIQDMKGRVQVYASKD-----VQKDLKAKYGQLDIGDIIGVKGPLNKSG--KGDLYVD 128

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRM 156
             + E+L+ +   PLP        +  +++ R++DL  +   +   + R++++  +R  +
Sbjct: 129 MAEYELLTKSLR-PLPEKFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVEGIRRFL 187

Query: 157 IAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
              +F+E  TP+L    P GA  R F+          Y L  AP+ Y + L+  GFDR F
Sbjct: 188 ADRDFMEVETPMLQVI-PGGASARPFVTHHNALDIDMY-LRIAPELYLKRLVVGGFDRVF 245

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF---------- 264
           +I   FR+E   +   P EF  ++   ++ +  D++N  E++LR V              
Sbjct: 246 EINRNFRNEGLSTRHNP-EFTMIEFYQAYADYIDLMNITEDMLRTVATNVLGSPIVVNTT 304

Query: 265 --SNGNTVSN-------NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
              NG+ V +        F R+   DAI +Y    P+  +  + ++   HF   E + ++
Sbjct: 305 KDENGDVVDSVEYDFGQPFTRLSMSDAILKYN---PEF-DAAVFNDPENHF--EELKAYA 358

Query: 316 KILSVN-PGYEVWAIPAK 332
           K + V  P   VW  P K
Sbjct: 359 KQVHVKIPENCVWG-PGK 375



 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VML   +  +++V LFP
Sbjct: 468 RALEYGLPPTAGEGIGIDRLVMLFTDSSTIKDVILFP 504


>gi|291565884|dbj|BAI88156.1| asparaginyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 463

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 121/310 (39%), Gaps = 55/310 (17%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCID 74
           G  V + GWV   R      F+++ D   +   QVV NPD   +  I + + +   + + 
Sbjct: 16  GEAVTVQGWVRTKRELKEFTFVEVNDGSCMANLQVVLNPDLTDYAAILRQLNTGASVEVV 75

Query: 75  GLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           G ++S  A+        GQ IEL A  +++   A+     +  +R    S  F      L
Sbjct: 76  GEIVSSPAK--------GQRIELKADTVQVYGEADPQTYVLQKKRH---SFEFLRTIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T     V R R   +       +   F+   TPI+TAS  EGA +    + ++  + 
Sbjct: 125 RSRTNTYGAVFRVRNACAAAVHQFFQERGFLWIHTPIITASDCEGAGELFSVTSLDLNNL 184

Query: 192 -----------------YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                             A      Q +  +MA  F   +   P FR E+  + R   EF
Sbjct: 185 PLTDTKAIDFSQDFFGKRAFLTVSGQLEAEIMALAFGNVYTFGPTFRAENSNTSRHLAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNN 273
           + ++ EM+F + D  ++  E  L+ +F+          EF N            N ++N 
Sbjct: 245 WMIEPEMAFCDLDGNMDLAEAFLKHIFKSVLEQCPEDLEFFNQRIDNSVLATADNIINNE 304

Query: 274 FLRICYDDAI 283
           F RI Y +AI
Sbjct: 305 FERITYTEAI 314


>gi|238603310|ref|XP_002395912.1| hypothetical protein MPER_03947 [Moniliophthora perniciosa FA553]
 gi|215467470|gb|EEB96842.1| hypothetical protein MPER_03947 [Moniliophthora perniciosa FA553]
          Length = 91

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 4/83 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD    G EI SG  R H  +V+ +     G+  E +     G   AF+ G PPHGG  
Sbjct: 5   SYDFFMRGEEILSGAQRIHDPKVLAEKMRAKGVDPESMT----GYMDAFRMGCPPHGGGG 60

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            G++R++ML L   N+R  SLFP
Sbjct: 61  IGLERVLMLFLKLNNIRRASLFP 83


>gi|72392387|ref|XP_846994.1| lysyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62359357|gb|AAX79796.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70803024|gb|AAZ12928.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 584

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 90/175 (51%), Gaps = 11/175 (6%)

Query: 91  TGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTR 147
           TG+  +SA +I +LS     LP   +G     +  RF+ R+LDL   R+   K  + R++
Sbjct: 179 TGEFSMSAYEITLLSTCFHMLPDEHYGLSSVEQ--RFRQRYLDLIVNRENA-KTFILRSK 235

Query: 148 IINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLL 205
           II+ +R     ++F+E  TP+L   +    AR F+   + +NQ  +  +  AP+ Y + L
Sbjct: 236 IISYIRSFFDQKDFLEVETPMLNQIAGGAAARPFITHHNELNQTMYLRI--APELYLKKL 293

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +  G DR ++I   FR+E       P EF  ++   ++ + +D + T E +L G+
Sbjct: 294 VVGGLDRVYEIGKQFRNEGIDLTHNP-EFTSVESYWAYADYNDWMETTEELLYGM 347



 Score = 45.1 bits (105), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 25/40 (62%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G  +A +  +PP GG   GIDR+VM L    N++EV LFP
Sbjct: 519 GYVQALEYALPPTGGWGLGIDRLVMYLTSQNNIKEVLLFP 558


>gi|323144601|ref|ZP_08079189.1| asparagine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322415610|gb|EFY06356.1| asparagine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 466

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 111/271 (40%), Gaps = 30/271 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   VGS V L+GW+   R    G  FL + D   +   QV+A+     +E      SE 
Sbjct: 12  GKYAVGSTVTLAGWLRTRRDSKAGFSFLAVNDGSCFNNVQVIADKSLNNYE------SEI 65

Query: 70  VLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRFK 127
           +    G  ++    T+ A+   GQ  E+ A  I++    E+    P+  +R   E +R +
Sbjct: 66  LSLTTGCSLAVEG-TLEASQGKGQAFEIKATAIKVYGFVEDPDTYPMSAKRHSIEYLR-E 123

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           Y  L  R + +   +  R     ++        F+  STP++TAS  EGA +    + ++
Sbjct: 124 YAHLRPRTNLIGAVMRIRNTAAYAIHSFFQERGFMWVSTPLITASDCEGAGEMFTVTNLD 183

Query: 188 QGSF-----------------YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
             +                  +A      Q      AS F + +   P FR ED  + R 
Sbjct: 184 LNNIPKDDKGQVDYSKDFFGRHAYLTVSGQLNVETYASAFSKCYTFGPTFRAEDSNTTRH 243

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
             EF+  + EM+F + +      E++L+ VF
Sbjct: 244 LAEFWMCEPEMAFTDLNGCAAVAEDMLKYVF 274


>gi|255535637|ref|YP_003096008.1| lysyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255341833|gb|ACU07946.1| Lysyl-tRNA synthetase (class II) [Flavobacteriaceae bacterium
           3519-10]
          Length = 565

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 120/253 (47%), Gaps = 19/253 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-G 75
           G  V+++G +   R  G   F +++D  G  QV  N D  C    K++ +E +   +D G
Sbjct: 46  GEKVQIAGRLMSRRIQGKASFAELQDSDGRIQVYFNRDEICTGDDKTLYNEVYKHLLDIG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-------EYPESIRFK 127
            ++    E     +  G++ +  +  +IL+ +   LP P   E          PE +R++
Sbjct: 106 DIIGIEGELFTTQV--GEMTVKVENFKILTKSLRPLPQPRTDENGVTHDAFNDPE-LRYR 162

Query: 128 YRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPS 184
            R++DL  +   K++ VKRT++ N+MR       + E  TPIL  S P G  A+ F+   
Sbjct: 163 QRYVDLIVNPQVKDVFVKRTKLFNAMRTFFNDAGYFEVETPIL-QSIPGGAAAKPFITHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  L++ +++ 
Sbjct: 222 NALDIPLY-LRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTALEIYVAYK 279

Query: 245 EQDDILNTMENVL 257
           + + +++  E +L
Sbjct: 280 DYNWMMDFTEKLL 292



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L    +++E+  FP
Sbjct: 455 RALEYGMPPTSGLGIGMDRLIMFLTNNPSIQEILFFP 491


>gi|317507688|ref|ZP_07965395.1| lysyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254015|gb|EFV13378.1| lysyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 1093

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 109/263 (41%), Gaps = 20/263 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           + G S  G  VR+SG V R R HGG++F+D+ D  G+ QV+            + R E  
Sbjct: 656 EAGRSRSGRQVRVSGRVLRERDHGGVVFVDLSDSSGVAQVILEERELSPGSLAAFRKEID 715

Query: 71  L--CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
           L   I       ++ T  A+++     L  + +         PLP           + + 
Sbjct: 716 LGDLISVDAAPGASRTGTASLLATGWRLDGKCLR--------PLPDKRRGLTDPEAKVRL 767

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R ++L  +   +  +  R  ++ ++R ++  E F+E  TP+L      GA      + +N
Sbjct: 768 RHVELMTNPQARRALSVRGSVLRALREQLWGEGFLEVETPVLQRVH-GGANAEPFRTHIN 826

Query: 188 QGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               Y +P     AP+ Y + L+  G +R F+I   FR+E       P EF  L+   + 
Sbjct: 827 A---YDMPLYLRIAPELYLKRLLVGGMERVFEIGRVFRNEGVDGTHNP-EFTLLEAYQAH 882

Query: 244 VEQDDILNTMENVLRGVFEEFSN 266
            +   + +  E +LR       N
Sbjct: 883 SDYRGMRDLTEQMLRACARAVGN 905



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DRIVMLL   +N+RE   FP+
Sbjct: 1054 ALEYAMPPTGGLGVGVDRIVMLLT-ERNIRETLAFPL 1089


>gi|126697148|ref|YP_001092034.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166229814|sp|A3PFA8|SYK_PROM0 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|126544191|gb|ABO18433.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 512

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 124/283 (43%), Gaps = 24/283 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR------SEWVLCID 74
           V L+G V   R  G I F  I D  G  Q+          + K          E V   D
Sbjct: 53  VSLAGRVMAKRVMGKIAFFTISDQDGQIQLYLEKRIINLNLEKQKLLSFEDIKEIVDIGD 112

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            + +  + +  N     G++ +  +K E+LS + + PLP           R++ R+LDL 
Sbjct: 113 WIGVYGTIKKTNK----GELSIKVEKWEMLSKSLQ-PLPDKWHGLTDIEKRYRQRYLDLI 167

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            +   KN+ K R + I+ +R  +   NF+E  TPIL + +    AR F+          Y
Sbjct: 168 VNPHSKNVFKTRAKCISFIRKWLDNRNFLEIETPILQSEAGGAEARPFITHHNTLDIPLY 227

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + + + ++  GF++ +++   FR+E   +   P EF  +++  ++ +  D++N 
Sbjct: 228 -LRIATELHLKRMVVGGFEKVYELGRIFRNEGISTRHNP-EFTSVEIYEAYSDYVDMMNL 285

Query: 253 MENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286
            E +++ +  +     T+         S  +LRI   D +++Y
Sbjct: 286 TEELIKDILADACGSLTINYQNKEIDFSKPWLRISMKDIVKKY 328



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR++ML+  + ++R+V  FP+
Sbjct: 457 ALEIGMPPTGGLGIGIDRLIMLITNSASIRDVIPFPL 493


>gi|325191469|emb|CCA26242.1| lysyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 536

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 122/251 (48%), Gaps = 27/251 (10%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVA----------NPDSACFEIAKSVRSEW 69
           V L+G +  +R     ++F+D+ +     Q+++          N      +I +S+R   
Sbjct: 65  VSLAGRIMSIRVASKKLVFMDLCNEGQCVQILSEKQYFQGKENNVMEEFHQIHESLRRGD 124

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKY 128
           ++ + G    +SA+        G++ +  +K+EIL+   +  P   +G +     IRF+ 
Sbjct: 125 IIGVTGFP-GKSAK--------GELSIIPRKLEILAPCTQPFPNDKYGIKN--PDIRFRM 173

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186
           R+LDL  +   ++I + R +++ S+R  + +  F+E  TP+L AS+    A  F+  SR 
Sbjct: 174 RYLDLLVNRDVRSIFETRAKVVRSIRNYLESRGFLEVETPMLFASAGGATAEPFVTKSRA 233

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  AP+ + + L+  GF+R F+I   FR+E   +   P EF   +   ++ + 
Sbjct: 234 LGNDLY-IRIAPELFLKQLVIGGFNRVFEIGKVFRNEGIDATHNP-EFTICEFYQAYADY 291

Query: 247 DDILNTMENVL 257
           + ++ T E +L
Sbjct: 292 ETLMQTAEEML 302



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + G+PP GG   GIDR+VMLL G  ++RE  LFP
Sbjct: 479 KALEYGLPPTGGFGIGIDRLVMLLTGKHHIRESILFP 515


>gi|186476208|ref|YP_001857678.1| lysyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|238691313|sp|B2JIY1|SYK_BURP8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|184192667|gb|ACC70632.1| lysyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 512

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 122/284 (42%), Gaps = 22/284 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L+G +   R  G   F  +RD  G  Q    P +   E       +W L   G +++ 
Sbjct: 72  VALAGRMMLKRVMGKASFATVRDGSGQIQFFITP-ADVGEATYEAFKKWDL---GDIVAA 127

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                  N   G++ +   ++ +LS A   PLP        + +R++ R++DL   D   
Sbjct: 128 KGVLFRTN--KGELSVRCTELRLLSKALR-PLPDKFHGLADQEMRYRQRYVDLIVTDEAR 184

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQA 197
           K  V RT+ ++S+R  M   +F+E  TP+L    P G  A+ F+          + L  A
Sbjct: 185 KTFVARTKAVSSIRKFMAEADFMEVETPMLH-PIPGGAAAKPFVTHHNALDMQMF-LRIA 242

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E ++
Sbjct: 243 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYKWLMDFTEQLI 301

Query: 258 R-GVFEEFSNGN--------TVSNNFLRICYDDAIRRYGTDKPD 292
           R    +   N           +S  F R+    AI++Y     D
Sbjct: 302 RQAAVDALGNAAITYQGRELDLSKPFHRLTITQAIQKYAPQYSD 345



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 14/92 (15%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG---GLY------RAFQC 531
           +++L   G EIA+G      SE+           K+V +   G    +Y      RA + 
Sbjct: 420 RFELFITGREIANG-----FSELNDPEDQAARFKKQVDQKDAGDEEAMYYDADYIRALEY 474

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 475 GMPPAGGCGIGIDRLVMLLTDSPSIRDVILFP 506


>gi|70983333|ref|XP_747194.1| aspartate-tRNA ligase [Aspergillus fumigatus Af293]
 gi|66844819|gb|EAL85156.1| aspartate-tRNA ligase, putative [Aspergillus fumigatus Af293]
          Length = 562

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D +  G EI SG  R H  E + +A ++  +  +  E  +     AF+ GMPPHGG+  
Sbjct: 475 WDTIVRGREICSGSQRIHKYEAVCKAMASRNMDPDGKE--WEHYVGAFKSGMPPHGGLGL 532

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++   LG  +VRE +LFP
Sbjct: 533 GVNRLLQGFLGLDDVRETTLFP 554


>gi|228471340|ref|ZP_04056141.1| lysyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228306841|gb|EEK15954.1| lysyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 579

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 131/296 (44%), Gaps = 43/296 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---------VL 71
           V ++G V   R  G   F++++D  G  QV    D  C    K + ++          ++
Sbjct: 57  VSIAGRVMSRRIMGKASFMELQDASGRIQVYVTRDDLCPGEDKDLYNKLFKKLLDIGDIV 116

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--------PES 123
            + G V             TG+I + A+++ +LS A   PLP+   ++         PE 
Sbjct: 117 GVKGFVFRTQ---------TGEISVHAEELTLLSKALR-PLPIVKAKDDQVFDGFTDPE- 165

Query: 124 IRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDF 180
           +R++ R++DL  +   K I +KRT+I  SMR    +  ++E  TP+L  S P G  AR F
Sbjct: 166 LRYRRRYVDLIVNEEVKGIFMKRTKIFQSMRNFFNSRGYLEVDTPVLQ-SIPGGAAARPF 224

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + Y + L+  GF+  ++ +  FR+E       P EF  +++ 
Sbjct: 225 VTHHNALDIPLY-LRIANELYLKRLIVGGFEGVYEFSRNFRNEGMDRTHNP-EFTCMEIY 282

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           +++ +   ++   E ++  + +E     T+            + R+   DAI+ YG
Sbjct: 283 VAYKDYRWMMQMTEQMIEHICQEVLGSTTIQVGEHTIEFKPPYRRLTMIDAIQEYG 338



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VMLL G ++++EV LFP
Sbjct: 462 RALEFGMPPTSGMGIGMDRLVMLLTGQESIQEVLLFP 498


>gi|329666683|gb|AEB92631.1| lysyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 509

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 147/358 (41%), Gaps = 47/358 (13%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGL 76
             +++G +   R  G + F D+ D  G  Q+    D      ++I K       L IDG 
Sbjct: 55  MTKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIDGE 114

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRR 135
           VM            TG++ + A  I  LS A   LP    G ++  +  R +Y  L    
Sbjct: 115 VMKTD---------TGELTIRATHITFLSKALRPLPNKWDGLKDVEQIYRQRYLDLITNH 165

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
           D+  +  V RT+II ++R  +   +F+E  TP+L  + P G  AR F+          Y 
Sbjct: 166 DSYMR-FVHRTQIIQAIRGYLNNRDFLEVETPVL-HNIPGGAEARPFITHHNALDIDLYM 223

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                   K+L++  G +R ++I   FR+E   +   P EF +L+   ++ +  D+++  
Sbjct: 224 RIALELPLKRLIVG-GMERVYEIGRVFRNEGLDTKHNP-EFTELETYAAYWDFHDVMDEA 281

Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIR-RYGTD--KP----DLRNPI 297
           E ++R   +  S    ++           F R+   D I+ + G D  KP    + R   
Sbjct: 282 EGIIRAAAKVVSPDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVDFWKPMTIEEARKVA 341

Query: 298 IMHNV-------TEHFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGNRAFCDR 343
             HNV         H +++ F  F +   V P    G+ V   P AK    +  F DR
Sbjct: 342 DEHNVHYESYWKVGHIINAFFEEFGEGSIVQPTFVYGHPVEVSPLAKKNADDPRFTDR 399



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 449 RAMEFGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 485


>gi|325681187|ref|ZP_08160717.1| asparagine--tRNA ligase [Ruminococcus albus 8]
 gi|324107109|gb|EGC01395.1| asparagine--tRNA ligase [Ruminococcus albus 8]
          Length = 457

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 78/348 (22%), Positives = 133/348 (38%), Gaps = 57/348 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV-RSEWVLCIDG 75
           +G  V + GWV   R    + F+++ D   +  V    D A     K + R    L ++G
Sbjct: 16  IGQTVTVCGWVRTSRNSKNVAFVELNDGTSLKNVQVVIDKADDPDYKDIPRVGTSLKVEG 75

Query: 76  -LVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRFLDL 133
            LV  R+A  IN         ++   I +L    ++ PL   G      ++ F      L
Sbjct: 76  KLVEGRNAAEIN---------VTPADITVLGDCPQDYPLQKKGH-----TLEFLRTMPHL 121

Query: 134 RRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGA------------RD 179
           R  T   N V R R  +  ++       NFI  +TP++T S  EGA            +D
Sbjct: 122 RGRTNTFNAVMRVRSVLAQAIHSYYQDRNFIYVNTPLITGSDCEGAGEMFRVTTIGFSQD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           +      +   F+          QL   + A+   + +   P FR E+  + +   EF+ 
Sbjct: 182 YKTEDDYDAADFFGRRAGLSVSGQLEGEMAATAMGKIYTFGPSFRAENSNTPKHLAEFWH 241

Query: 237 LDMEMSFVEQDDILNTMENVLRGVF---------------EEFSNG------NTVSNNFL 275
           ++ E++F E DD++   E++++ V                  F  G        +S+ F 
Sbjct: 242 VEPEIAFAELDDVIEVAEDMVKHVIGTVLEKCPDEIAFFDAHFEKGLKARLEELISHEFG 301

Query: 276 RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVN 321
           R+ Y +AI        +   P+       TEH  +   +VF K + V 
Sbjct: 302 RVTYTEAIELLKKSGENFVYPVEWGCDLQTEHERYLSEKVFGKAVFVT 349



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 14/36 (38%), Positives = 23/36 (63%)

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           + G  PHGG   G +R++M   G +N+R+V +FP +
Sbjct: 417 KYGTVPHGGFGLGFERLIMYTTGVQNIRDVIMFPRT 452


>gi|261330188|emb|CBH13172.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 584

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 90/175 (51%), Gaps = 11/175 (6%)

Query: 91  TGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTR 147
           TG+  +SA +I +LS     LP   +G     +  RF+ R+LDL   R+   K  + R++
Sbjct: 179 TGEFSMSAYEITLLSTCFHMLPDEHYGLSSVEQ--RFRQRYLDLIVNRENA-KTFILRSK 235

Query: 148 IINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLL 205
           II+ +R     ++F+E  TP+L   +    AR F+   + +NQ  +  +  AP+ Y + L
Sbjct: 236 IISYIRSFFDQKDFLEVETPMLNQIAGGAAARPFITHHNELNQTMYLRI--APELYLKKL 293

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +  G DR ++I   FR+E       P EF  ++   ++ + +D + T E +L G+
Sbjct: 294 VVGGLDRVYEIGKQFRNEGIDLTHNP-EFTSVESYWAYADYNDWMETTEELLYGM 347



 Score = 45.1 bits (105), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 25/40 (62%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G  +A +  +PP GG   GIDR+VM L    N++EV LFP
Sbjct: 519 GYVQALEYALPPTGGWGLGIDRLVMYLTSQNNIKEVLLFP 558


>gi|326794290|ref|YP_004312110.1| Lysyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326545054|gb|ADZ90274.1| Lysyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 500

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 27/280 (9%)

Query: 5   RTHSCGDLGVSDVGSFVR--LSGWVHRVRPHGGII-----FLDIRDHYGITQVVANPDSA 57
           R     DL  +++G F +  L    H+V   G I+     F+ ++D  G  Q   N  + 
Sbjct: 42  RDAYAADLQ-AELGQFEKAELEEKDHKVSIAGRIVRNRGAFMLLQDMTGQIQAYVNRKAL 100

Query: 58  CFEIAKSVRSEW----VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
             E+    ++ W    ++ I G V              G + +  QK E+L+ +   PLP
Sbjct: 101 SPELLAEQKT-WDLGDIIGISGPVHKSGK---------GDLYIDMQKAELLTKSLR-PLP 149

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TA 171
              +      +R++ R++DL  +   +   + R++II+++R  +    F+E  TP+L T 
Sbjct: 150 DKHKGLADMEMRYRQRYVDLIVNQESRTTFEVRSKIISTIRRFLEDRRFMEVETPMLQTI 209

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                AR F+          Y +  AP+ Y + L+  GF+R F+I   FR+E   +   P
Sbjct: 210 PGGATARPFVTHHNAMDMQMY-MRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP 268

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
            EF  ++   ++ + +D+++  E++LR V E+      V+
Sbjct: 269 -EFTMIEFYQAYADYNDLMDLTEDMLRTVSEKVLGTTNVT 307



 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   + ++R+V LFP
Sbjct: 459 ALEYGLPPTAGEGIGIDRLVMLFTDSPSIRDVLLFP 494


>gi|188991535|ref|YP_001903545.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|229559863|sp|B0RSQ8|SYK_XANCB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|167733295|emb|CAP51494.1| lysyl-tRNA synthetase heat inducible [Xanthomonas campestris pv.
           campestris]
          Length = 505

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 129/304 (42%), Gaps = 31/304 (10%)

Query: 5   RTHSCGDL-------------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           RTH  GDL              +      V+L+G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  RTHFAGDLQAEFAEAETWTAEALEAADRSVKLAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  --ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
              N     +   K      ++ ++G  ++R+         TG++ + A  + +L+ +  
Sbjct: 101 LQGNVLGDAYTAFKGWDVGDIVAVEG-GLTRTK--------TGELSVKASALRLLTKSLR 151

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPI 168
            PLP           R++ R++DL      + + +KR++II ++R  + A  F+E  TP+
Sbjct: 152 -PLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAIRAWLDARRFLEVETPM 210

Query: 169 LTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +    P G  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   
Sbjct: 211 MH-YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVS 268

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +   P EF  L++  ++    +I++  E V+R   +       VS +   I    A RR+
Sbjct: 269 TRHNP-EFTMLELYEAYATYHEIMDLTEQVIRDTAQGVLGTTQVSWDGADIDLAPAFRRW 327

Query: 287 GTDK 290
             D+
Sbjct: 328 RMDE 331



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASG-----GIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-RAFQCGMP 534
           +++L  NG E+A+G        +  +    Q  +  G   E +   +   Y RA + GM 
Sbjct: 413 RFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMH--YDADYIRALEYGMA 470

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 471 PTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|121702897|ref|XP_001269713.1| lysyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119397856|gb|EAW08287.1| lysyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 584

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 134/314 (42%), Gaps = 46/314 (14%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           +RL G +   R  G  +IF DI  +    QV+ N         +S +  + L   G   S
Sbjct: 128 LRLVGRIRTYRLAGSKLIFFDIAQNGHKVQVMCNIRRLDGVSPESFKKFYRLLRRGDAFS 187

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELP---------LPVFGERE----YPESIRF 126
                     + G+   +A+  E+  +A ELP         +PV  +      YP  ++F
Sbjct: 188 ----------VIGRPHRTARG-ELTVLATELPRMLSPCLHDVPVDAKEHETSPYPRHVQF 236

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
                    D    +I++ R+ II  +R   +  +F+E STPI+ + +    AR F   +
Sbjct: 237 LA-------DPKTADIIRARSAIIQFLRQFFLDRSFMEVSTPIVGSIAGGAIARPFHTSA 289

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   +L  AP+ + + L+  GFDR F+I P FR+E       P EF   +   ++ 
Sbjct: 290 TEFPDRQLSLRIAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP-EFTTCEFYHAYA 348

Query: 245 EQDDILNTMENVLRGV---FEEFSNGNTV-------SNNFLRICYDDAI-RRYGTDKPDL 293
             +D+++  EN+L G+    +EF+   T+       S  F R+ +   I  + G   PDL
Sbjct: 349 NLEDLMSITENLLSGMAAHIQEFNKNATLSPPEVDFSTPFRRVDFTTGIEEKIGRKLPDL 408

Query: 294 RNPIIMHNVTEHFV 307
             P  +  V + F+
Sbjct: 409 DAPDALDQVKQLFI 422


>gi|24640851|ref|NP_727353.1| Lysyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|320541906|ref|NP_001188571.1| Lysyl-tRNA synthetase, isoform C [Drosophila melanogaster]
 gi|22832014|gb|AAF46510.2| Lysyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|318069350|gb|ADV37653.1| Lysyl-tRNA synthetase, isoform C [Drosophila melanogaster]
          Length = 607

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 20/248 (8%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           + ++G VH +R  G  +IF D+R      QV+A+        AKS +SE    ID   + 
Sbjct: 142 LSVAGRVHAIRESGAKLIFYDLRGEGVKVQVMAS--------AKSYKSEADFEIDTSKLR 193

Query: 80  RSAETIN-----ANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           R  + I           G++ +   +I++LS     LP   FG ++  +  R++ R+LDL
Sbjct: 194 R-GDIIGVVGHPGKTKKGELSVMPSEIKLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 250

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
              + + +    R +II+ +R  +    F+E  TP++   +        V    +     
Sbjct: 251 ILNNNVREKFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNDLKMDL 310

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  DI++ 
Sbjct: 311 FMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYADIMDI 369

Query: 253 MENVLRGV 260
            E ++ G+
Sbjct: 370 TEQLVSGM 377



 Score = 43.9 bits (102), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 552 SLEYGLPPTGGFGMGIDRLAMFLTDSNNIKEVLLFP 587


>gi|195488867|ref|XP_002092495.1| GE11636 [Drosophila yakuba]
 gi|194178596|gb|EDW92207.1| GE11636 [Drosophila yakuba]
          Length = 460

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 136/328 (41%), Gaps = 55/328 (16%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  + + GW+  VR      FLDI D  G T       S+ F++      E      G V
Sbjct: 24  GDSLAIQGWIKNVRRLKNNTFLDIND--GST-------SSRFQVVVPRTPENQHLAPGSV 74

Query: 78  MSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGEREYPESIRFKYRFLDLR 134
           ++   E   A    G  EL A ++E L+   + E  P     ++  PE +R ++  L  R
Sbjct: 75  IAAVGEIQVAP--NGSFELHASQVETLAEGHLQEGYPFSP-KQKHPPEYVR-EHLHLRSR 130

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA----------RDFL--- 181
            D +   +  R +   ++   M A++F++ +TP+LT +  EGA           D L   
Sbjct: 131 VDFVAAQMRVRHKAQKAIHDYMDAQDFVQINTPLLTTNDCEGAGEVFRVQPDSEDLLKQM 190

Query: 182 ----VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
               VP   +     A      Q     M  G    + ++P FR E+ +S     EFY  
Sbjct: 191 KRPNVPVEQSYFDGKAFLSVSGQLHLEAMTYGLGNTYTLSPAFRAENSKSPLHLAEFYMF 250

Query: 238 DMEMSFVE-QDDILNTMENVLRGVF--------EEFS----NGNTVSN------NFLRIC 278
           + E++ +E  + +   +E +L+ V         E+ S    N N+ S+       + +I 
Sbjct: 251 EAELAHLEVLEKLAQFIEKMLKSVTNRLLETSAEDLSFCQRNSNSSSDLPWLQVPWKKIS 310

Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           YD+A++    +K  L+ PI   N+ E F
Sbjct: 311 YDEALQVLQENKNSLKTPI---NLNEGF 335


>gi|42560967|ref|NP_975418.1| aspartate-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|42492464|emb|CAE77060.1| Aspartate-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320475|gb|ADK69118.1| aspartate--tRNA ligase domain protein [Mycoplasma mycoides subsp.
           mycoides SC str. Gladysdale]
          Length = 100

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 9/95 (9%)

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL-- 474
           R  +A+   +   N F+  W++DFP +E++E+E++   AH+PFTM +   ESL   D+  
Sbjct: 5   RVELAKMFNLAYPNEFKLLWVVDFPLFEYSEKEQRYLAAHHPFTMTKP--ESLDTFDVNK 62

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
               A+ YDLV NGFEI  GGI   + E+++  F+
Sbjct: 63  KDAIAYAYDLVMNGFEI--GGI---VKELLILKFN 92


>gi|324508990|gb|ADY43790.1| Asparaginyl-tRNA synthetase [Ascaris suum]
          Length = 549

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 114/287 (39%), Gaps = 22/287 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
            + + G  V +  WVHR+R  G  ++F+ +RD  G  Q V +        A ++ +E  +
Sbjct: 120 ALKNRGKRVCVKAWVHRLRRQGKALMFIVLRDGTGFLQTVLSDKLCQTYDAVTLNTESTV 179

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +     E           EL     E++  A    +      E         R L
Sbjct: 180 IVYGTLQ----EVPEGKTAPDGHELIVDYWELIGAAPAGGIDCVLNEEAGVDTMLDNRHL 235

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   + +  R  +  +MR    A  + E S P L  +  EG           + S+
Sbjct: 236 VIRGEKAARVLRIRAAVTRAMREHFHAAGYTEISPPTLVQTQVEGGSTLFALDYFGEPSY 295

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  + S  D Y  IA  +R E  R+ R   E+  ++ E +F+  D+++ 
Sbjct: 296 --LTQSSQLYLETCLPSLGDVYC-IAQSYRAEKSRTRRHLAEYSHVEAECAFLTFDELME 352

Query: 252 TMENVLRGVFE------------EFSNGNTV--SNNFLRICYDDAIR 284
            +E+++    +            EF N +       F+R+ Y DAI+
Sbjct: 353 KIESLVCDTVDRLMADPVTKAMIEFVNPDFTPPKRPFMRLRYGDAIK 399



 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 12/78 (15%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
           EI  G +R    + +++AF    IS E     V+ R        + G  PHGG   G++R
Sbjct: 472 EIVGGSMRIWKEDDLIKAFEGAQISPEHYYWYVDQR--------KYGTCPHGGYGLGLER 523

Query: 546 IVMLLLGAKNVREVSLFP 563
            V  L    ++R+V L+P
Sbjct: 524 FVCWLTNTYHIRDVCLYP 541


>gi|212703997|ref|ZP_03312125.1| hypothetical protein DESPIG_02050 [Desulfovibrio piger ATCC 29098]
 gi|212672590|gb|EEB33073.1| hypothetical protein DESPIG_02050 [Desulfovibrio piger ATCC 29098]
          Length = 454

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/295 (21%), Positives = 117/295 (39%), Gaps = 40/295 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + + GW+   R      F++I D   +T  Q + +  +A  E      +       G  +
Sbjct: 19  ITVCGWIRTRRDAKDFSFVEINDGSCLTNMQCIVDAGTAAHEGLGDANT-------GASV 71

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           + + E + +     + E+ A+ I +  +A+    P+  +R   E +R     L +R +  
Sbjct: 72  AVTGELVASPGKGQKWEVRAESIRVFGLADPESFPLQKKRHSDEFLR-GIAHLRMRTNKY 130

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS------FY 192
                 R+    ++     +++F    TPILT S  EGA +    + +  G       F+
Sbjct: 131 GAAFRIRSEAARAVHDYFHSQHFSWVHTPILTGSDCEGAGEMFRVTALPAGEKDLSKDFF 190

Query: 193 ---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
              A      Q +   +A G  R +   P FR E+  + R   EF+ ++ EM+F E +DI
Sbjct: 191 GRQANLTVSGQLEAEALALGLGRVYTFGPTFRAENSNTPRHAAEFWMIEPEMAFAELEDI 250

Query: 250 LNTMENVLRGV--------------FEEFSNGNTV-------SNNFLRICYDDAI 283
           +   E + R V              F+ F +   +       +  F R+ Y DAI
Sbjct: 251 MELGEGLTRHVVDHALTRCESDLKLFDNFVDKGLIDRLKGMLAQPFARVSYRDAI 305


>gi|54297690|ref|YP_124059.1| hypothetical protein lpp1741 [Legionella pneumophila str. Paris]
 gi|81370415|sp|Q5X4D5|SYK_LEGPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|53751475|emb|CAH12893.1| hypothetical protein lpp1741 [Legionella pneumophila str. Paris]
          Length = 496

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 129/283 (45%), Gaps = 27/283 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V ++G +   R  G   F  I+D  G  QV   +N     +E  K     W L   G ++
Sbjct: 63  VSVAGRIVLRRIMGKASFFHIQDVSGRIQVYLRSNDLPDVYEQFKH----WDL---GDIV 115

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
               E    N  TG++ ++A+ +E+L+ +   PLP        + ++++ R++DL   + 
Sbjct: 116 GVQGELFKTN--TGELTINAEYVELLTKSLR-PLPDKFHGLADQELKYRKRYVDLIANED 172

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALP 195
             K  + R+ +I + R  M   +F+E  TP++    P GA  R F+        + Y L 
Sbjct: 173 SRKTFLIRSHLIKAFREFMDDNHFLEVETPMM-HPIPGGALARPFVTHHNTLDMTMY-LR 230

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF+R ++I   FR+E   +   P EF  L+   ++ + +D++N  E 
Sbjct: 231 IAPELYLKRLVVGGFERVYEINRNFRNEGISTRHNP-EFTMLEFYQAYADYNDLMNFTEQ 289

Query: 256 VLRGVFEEF-------SNGNTVSNN--FLRICYDDAIRRYGTD 289
           +   + ++          G  +  N  F R+   +AI +Y  D
Sbjct: 290 LFHYLCDKVLATRQIEYQGQVIDFNKPFERLSVKEAILKYHPD 332



 Score = 43.9 bits (102), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 11/90 (12%)

Query: 485 VCNGFE--IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---------YRAFQCGM 533
           V + FE  IA   I N  SE+           K+V E   G L           A + G+
Sbjct: 403 VTDRFEFFIAGREIANGFSELNDAEDQAERFRKQVEEKDAGDLEAMHFDSDYIEALEYGL 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           PP  G   GIDR+VML   ++++R+V LFP
Sbjct: 463 PPTAGEGIGIDRLVMLFTNSQSIRDVILFP 492


>gi|15805401|ref|NP_294095.1| lysyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|11387155|sp|Q9RXE1|SYK_DEIRA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|6458049|gb|AAF09951.1|AE001897_4 lysyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 525

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 130/304 (42%), Gaps = 33/304 (10%)

Query: 2   HRYRTHSCGDLGVSDVGS-----FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPD 55
           H  R    G+ G  + G         L+G V  +R  G   F D+ D  G  Q+  +  D
Sbjct: 52  HPAREEGTGEGGTLEPGQKWEEESYSLAGRVTLMRHMGKAAFADLSDEDGKIQLFFSKQD 111

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +A F+  K +    ++ + G               TGQ+ L   + + L V    PLP  
Sbjct: 112 TAGFDATKKIDLGDIIGVKGHPFVTK---------TGQLTLHVTEWQPL-VKSLHPLPSK 161

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL--TAS 172
                 E +R + R++DL   +   +    R+R+I  +R  +    F+E   P L  TA 
Sbjct: 162 FHGLQDEELRARRRYVDLMVTEGAREKFQARSRMIRYIRNELDERGFMEVEGPTLQVTAG 221

Query: 173 SPEGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             E AR F+  +  N  S+ + L  + + Y + L+  GF+R ++I   +R+E       P
Sbjct: 222 GAE-ARPFM--THHNALSYDFKLRISLELYLKRLLVGGFERVYEIGRVYRNEGIDRTHNP 278

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS-------NGNTV--SNNFLRICYDDA 282
            EF  L++  ++ +  DI   +E++L G+ +E          G T+  +  F R+ Y   
Sbjct: 279 -EFTMLELYWAYADYSDIAKLVEDLLSGLAKEVHGSYQFEYQGKTLDFTPPFARVDYLGG 337

Query: 283 IRRY 286
           +R +
Sbjct: 338 LREH 341



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 16/94 (17%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----------LYRAFQ 530
           ++++ C+GFE+A     N  SE+   AF      +     +  G             A +
Sbjct: 417 RFEVFCSGFELA-----NAFSELN-DAFDQRERFEAQTARQAAGDDEAHPQDEDFLLALE 470

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GMPP GG+  GIDR+ MLL  + ++R+V LFP+
Sbjct: 471 YGMPPAGGLGIGIDRLAMLLTDSDSIRDVLLFPL 504


>gi|291303742|ref|YP_003515020.1| lysyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290572962|gb|ADD45927.1| lysyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 501

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 12/261 (4%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +  G    ++G V  VR  G + F  IR+  G TQ+      A  ++ +    EW   ID
Sbjct: 60  ASTGVIASVTGRVIFVRTGGKLCFATIREGDG-TQLQLMLSLA--KVGEESLGEWKRLID 116

Query: 75  -GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V++ + E I +    G++ + A + E+ + A   PLPV   +   E  R + R++DL
Sbjct: 117 IGDVVAVTGEVITSK--RGELSVMADEWEMAAKALR-PLPV-AHKPMSEETRVRQRYVDL 172

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             R         R  +++++R  M   +F+E  TP+L A +S   AR F           
Sbjct: 173 IMRPEARDTARNRAAVVHTLRDIMHQRDFMEVETPVLQAIASGANARPFTTHFNAINMDV 232

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + Y +  +  G DR F+I+  FR+E   S   P EF  ++   ++ +   I  
Sbjct: 233 Y-LRIALELYLKRCVVGGIDRVFEISRNFRNEGADSTHSP-EFSMMEAYEAYGDYRSIGR 290

Query: 252 TMENVLRGVFEEFSNGNTVSN 272
              +++ G  E      TV++
Sbjct: 291 LTRDLVVGCAESVFGSTTVTH 311



 Score = 43.5 bits (101), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR++M L G   +RE  LFP
Sbjct: 461 RAMEYGMPPTGGMGMGIDRLLMALTGL-GIRETILFP 496


>gi|194882351|ref|XP_001975275.1| GG20650 [Drosophila erecta]
 gi|190658462|gb|EDV55675.1| GG20650 [Drosophila erecta]
          Length = 460

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 140/329 (42%), Gaps = 57/329 (17%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAKSVRSEWVLCIDGL 76
           G  + + GW+  VR      FLDI D            S+C F++      E      G 
Sbjct: 24  GDSLAIQGWIKNVRRLKNNTFLDINDG----------SSSCRFQVVVPRTPENQHLSPGS 73

Query: 77  VMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGEREYPESIRFKYRFLDL 133
           V++   +   A    G  EL A ++E+L+   + E  P     ++  PE +R ++  L  
Sbjct: 74  VIAAVGKIQVAP--NGSFELHANQVEMLAEGRLQEGYPFSP-KQKHPPEYVR-EHLHLRS 129

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPSRVNQGSF 191
           R D +   +  R +   ++   M  +NF++ +TP+LT +  EGA +   + P   N    
Sbjct: 130 RVDFVAAQMRVRHKAQKAIHDYMDEQNFVQINTPLLTTNDCEGAGEVFRVQPDSENLLKQ 189

Query: 192 YALPQAP--QQY---KQLL----------MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
              P  P  Q Y   K  L          M  G    + ++P FR E+ +S     EFY 
Sbjct: 190 MNRPNIPVEQSYFDGKVFLTVSGQLHLEAMTYGLGNTYTLSPAFRAENSKSPLHLAEFYM 249

Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVF--------EEFS----NGNTVSN------NFLRI 277
            + E++ +E+ + +   +E +L+ V         E+ S    N ++VS+       +  I
Sbjct: 250 FEAELAHLEELEKLAKFIEQMLKSVTNRLLETSAEDLSFCQKNSSSVSDLPWLQVPWTII 309

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
            YDDA++    +K  L+ PI   ++TE F
Sbjct: 310 SYDDALQVLQENKDSLKTPI---SLTEGF 335


>gi|38234551|ref|NP_940318.1| lysyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|38200814|emb|CAE50518.1| Putative lysyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 520

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 5/163 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLPV    +  E +R ++R+ DL  R+    N + R +++ ++R  +  ++F+E  TP+L
Sbjct: 161 PLPV-AFADMSEDMRIRHRYTDLIMREQARTNAMTRIKVMRALRHYLEGQDFMEVETPML 219

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T      AR F+  S       Y L  AP+ Y +  +  G +R F++   FR+E   S 
Sbjct: 220 QTLHGGAAARPFVTHSNALDIDLY-LRIAPELYLKRCVVGGIERVFEVNRNFRNEGVDSS 278

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
             P EF  L+   ++   DD    ++ +++ V  E     TV+
Sbjct: 279 HSP-EFAMLETYQAWGTYDDGAKMIQELIQSVAMEVFGSTTVT 320



 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        I+    E   +  +       V++  F     A + GM
Sbjct: 429 KWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMVLDEDF---LAAMEQGM 485

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   GIDR++M L G   +RE  LFP+
Sbjct: 486 PPTAGCGMGIDRLLMALTGL-GIRETVLFPI 515


>gi|305662675|ref|YP_003858963.1| lysyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304377244|gb|ADM27083.1| lysyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 516

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 112/245 (45%), Gaps = 27/245 (11%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G V  +R HG I+F  + D     Q+V   D     + K V    V  + G V  R  
Sbjct: 52  IAGRVMGLRRHGKIVFGVLSDGTENIQLVFRYDIVGERLWKLVEILNVGDVIG-VRGRPI 110

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--------RFKYRFLDLR 134
           +T+      G++ +  +   +LS+           R+YPE          R++ R+LD+ 
Sbjct: 111 KTLR-----GELSILVEDFRVLSITW---------RDYPEKWHGIVDSEKRYRLRYLDIM 156

Query: 135 RDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            +   +N I+   +I  + R  + +  FIE  TP L        AR F+        + Y
Sbjct: 157 LNEKVRNAIISTYKIEKAFRDFLDSRGFIEIHTPKLQPIYGGALARPFITKMYALDKTLY 216

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y +  + +   + ++IA CFR+ED  +   P EF Q+++  +F + +D++  
Sbjct: 217 -LSIAPETYLKRAVVANLFKVYEIAVCFRNEDIDAQHYP-EFVQIEIYQAFADWNDMMEL 274

Query: 253 MENVL 257
           +EN++
Sbjct: 275 VENMI 279



 Score = 41.2 bits (95), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 9/67 (13%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF---------PMSQNFCDLLMGSPS 577
           RA + GMPP  G+  GI R+VM LLG  ++++V  F          +++ F D+L     
Sbjct: 450 RALEYGMPPTAGVGIGIYRLVMQLLGLSSIKDVIPFTIVEQDEFSTIAEQFEDILRYYRE 509

Query: 578 TVSVEQL 584
            + +++L
Sbjct: 510 KLQLDKL 516


>gi|21231301|ref|NP_637218.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66768647|ref|YP_243409.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|39932239|sp|Q9L3G6|SYK_XANCP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81305381|sp|Q4UU84|SYK_XANC8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|7688055|emb|CAB89697.1| putative lysyl tRNA synthetase [Xanthomonas campestris pv.
           campestris]
 gi|21112955|gb|AAM41142.1| putative lysyl tRNA synthetase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573979|gb|AAY49389.1| putative lysyl tRNA synthetase [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 505

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 129/304 (42%), Gaps = 31/304 (10%)

Query: 5   RTHSCGDL-------------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           RTH  GDL              +      V+L+G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  RTHFAGDLQAEFAEAETWTAEALEAADRSVKLAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  --ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
              N     +   K      ++ ++G  ++R+         TG++ + A  + +L+ +  
Sbjct: 101 LQGNVLGDAYTAFKGWDVGDIVAVEG-GLTRTK--------TGELSVKATALRLLTKSLR 151

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPI 168
            PLP           R++ R++DL      + + +KR++II ++R  + A  F+E  TP+
Sbjct: 152 -PLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAIRAWLDARRFLEVETPM 210

Query: 169 LTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +    P G  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   
Sbjct: 211 MH-YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVS 268

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +   P EF  L++  ++    +I++  E V+R   +       VS +   I    A RR+
Sbjct: 269 TRHNP-EFTMLELYEAYATYHEIMDLTEQVIRDTAQGVLGTTQVSWDGADIDLAPAFRRW 327

Query: 287 GTDK 290
             D+
Sbjct: 328 RMDE 331



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASG-----GIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-RAFQCGMP 534
           +++L  NG E+A+G        +  +    Q  +  G   E +   +   Y RA + GM 
Sbjct: 413 RFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMH--YDADYIRALEYGMA 470

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 471 PTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|237741501|ref|ZP_04571982.1| lysyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229429149|gb|EEO39361.1| lysyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 493

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 119/282 (42%), Gaps = 36/282 (12%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLCIDGLV 77
           + +G +  +R  G + F  I D  G  Q+    D    E    I K +    ++ ++G +
Sbjct: 57  KTAGRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNVGDIIGLEGEL 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDL--- 133
                E         ++ L  + I +L+     LP    G  +    IR++ R++DL   
Sbjct: 117 FITHTE---------ELTLRVKSIALLTKNVRSLPEKYHGLTDV--EIRYRKRYVDLIMN 165

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
              RDT     +KRT+II ++R  +    F+E  TPI+        A+ F+         
Sbjct: 166 PEVRDTF----IKRTKIIKAIRKYLDDRGFLEVETPIMHPILGGAAAKPFITHHNTLNID 221

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R + +   FR+E   +   P EF  +++  +  +  D++
Sbjct: 222 LY-LRIAPELYLKKLIVGGFERVYDLNRNFRNEGISTRHNP-EFTMVELYQAHADFHDMM 279

Query: 251 NTMENVLRGVFEEFSNGNTVS--------NNFLRICYDDAIR 284
           +  E ++  V +E +    +          NF R+   D I+
Sbjct: 280 DLCEGIISSVCQEVNGTTDIEYDGVKLSLKNFARVHMVDMIK 321



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL GA ++R+V LFP
Sbjct: 452 ALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVILFP 487


>gi|218779631|ref|YP_002430949.1| lysyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218761015|gb|ACL03481.1| Lysyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 504

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 123/279 (44%), Gaps = 21/279 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWV 70
           ++D G    ++G +  +   G   F+  +D  G  Q     D      F++ K++     
Sbjct: 48  LTDEGPVFGVAGRLMAINKFGKSAFVRFKDRTGQMQAYIRKDQVDEQAFKVFKALHVGDF 107

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           + + G +             TG+  L+A+++ +L  +   PLP  + + + PE  R++ R
Sbjct: 108 VGLKGTIFKTK---------TGEWTLAARELTLLCKSLR-PLPEKYNKLKDPEK-RYRQR 156

Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR--DFLVPSRV 186
           +LDL   +   +  ++R++I+ +MR      +F+E  TP++    P GA    F+     
Sbjct: 157 YLDLIMNEETRETFIRRSKIVRAMRRFFDQRDFLEVETPMMQ-PIPGGAEACPFVTHHNA 215

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
              + Y L  AP+ Y + L+  G +R ++I   FR+E   +   P EF  L+   ++   
Sbjct: 216 LDMALY-LRIAPELYLKRLVVGGLERVYEINRNFRNEGVSTRHNP-EFTMLEFYWAYATY 273

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            D++   E + + V +E     T       I ++   +R
Sbjct: 274 HDLMELTEEMFQHVAKEVLGSTTFMYQGQEISFEGPWKR 312



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 28/47 (59%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
           A + GMPP  G   GIDR+ MLL  A ++REV LFP  ++   L  G
Sbjct: 449 ALEYGMPPTAGQGVGIDRLAMLLTDAASIREVILFPHMRHAASLKTG 495


>gi|212637016|ref|YP_002313541.1| lysyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|226736754|sp|B8CU98|SYK_SHEPW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|212558500|gb|ACJ30954.1| Lysyl-tRNA synthetase, class-2 [Shewanella piezotolerans WP3]
          Length = 500

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 106/226 (46%), Gaps = 24/226 (10%)

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--------RFKYRFLDL-RRDTLHK 140
           +TG++ LS  K ++    E+  L     R  PE          R++ R++DL   +   +
Sbjct: 113 VTGKLHLSG-KGDLYVNMEQYQLLTKALRPLPEKFHGLSDQETRYRQRYVDLIVNEESRE 171

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
             + R+++++++R  MI + F+E  TP++  S P GA  R F         + Y L  AP
Sbjct: 172 AFIMRSKVVSAIRNFMIKKEFMEVETPMM-HSIPGGASARPFETHHNALDMAMY-LRIAP 229

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F++   FR+E   S R   EF  ++  M++ +  D+++  E +L 
Sbjct: 230 ELYLKRLVVGGFERVFEVNRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLS 288

Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDLRN 295
            +  +      +            + R+   DAI++Y  +   +++
Sbjct: 289 SIATDLCGSTQLPYGEHTVDFGGPYARLSMLDAIKKYNPENATIQS 334



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 23/37 (62%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 458 RALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|212550927|ref|YP_002309244.1| asparaginyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|259511566|sp|B6YRL1|SYN_AZOPC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|212549165|dbj|BAG83833.1| asparaginyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 464

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/328 (22%), Positives = 130/328 (39%), Gaps = 52/328 (15%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH---YGITQVVANPDSACFEIAKSVRSE 68
           L   D    V + GWV   R +  I F+++ D    +GI Q+V N      +  KS+ + 
Sbjct: 12  LSTPDFNRKVCVKGWVRTRRGNKNISFIELNDGSTVHGI-QIVVNVVKLGEDSLKSITTG 70

Query: 69  WVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             + I+GL++    E        GQ +E+ A +IEI  +A+    P+  +    E +R +
Sbjct: 71  ACIAINGLLVKSKGE--------GQKVEIQADEIEIYGIADPSVYPLQKKWHSLEFLR-E 121

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
             +L  R +T    +  R  +  ++      + F    TPI+T+S  EGA      + ++
Sbjct: 122 IAYLRPRTNTFGCILRIRHHLAYAIHKYFNKQGFFYFHTPIITSSDAEGAGSMFQITDLD 181

Query: 188 QGS--------------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRL 230
             +              F+          QL   L A      +   P FR E   + R 
Sbjct: 182 IANCPKTKDGEVDYTRDFFGCSTNLTVSGQLEGELGALALGGIYTFGPIFRAEKSNTPRH 241

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGN-----------T 269
             EF+ ++ E++F + +D ++  E+ L+ +            EF N              
Sbjct: 242 LAEFWMIEPEIAFYDINDNMDLAEDFLKYIISYAMKYCKDDIEFLNNTYNNELIEHLNFV 301

Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +SN F+R+ Y + IR       +   PI
Sbjct: 302 LSNRFVRLAYSEGIRILEQSNEEFEFPI 329


>gi|156054929|ref|XP_001593389.1| hypothetical protein SS1G_06311 [Sclerotinia sclerotiorum 1980]
 gi|154704091|gb|EDO03830.1| hypothetical protein SS1G_06311 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 459

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 10/153 (6%)

Query: 113 PVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
           PV  + E PE+ R + R LDL   + +   +  R++I   +R  ++ +NF+E  TPIL A
Sbjct: 77  PVPRKLEDPET-RIRNRHLDLLVNNDVAATLRLRSKITQHIRDFLVQDNFLEFQTPIL-A 134

Query: 172 SSPEGARDFLVPSRVNQGSF----YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
               GA     P + N   F     AL  AP+ + + L+  G DR F+I P FR+E   +
Sbjct: 135 DKASGA--MAQPFKTNATEFPEKELALRIAPELWLKRLVIGGLDRVFEIGPAFRNEGLDA 192

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
              P EF   +   ++ + +D+++  EN++ G+
Sbjct: 193 THNP-EFTTCEFYKAYADIEDLISMTENLISGL 224



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 29/48 (60%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G  +A + G+PP GG   G+DR+VM L GAK + +V  F   +N  +L
Sbjct: 398 GYIQALEVGLPPTGGWGCGVDRLVMWLSGAKRISDVLPFGSLRNVVNL 445


>gi|116627679|ref|YP_820298.1| asparaginyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|122267724|sp|Q03L20|SYN_STRTD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116100956|gb|ABJ66102.1| asparaginyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|312278206|gb|ADQ62863.1| Asparaginyl-tRNA synthetase (AsnS) [Streptococcus thermophilus
           ND03]
          Length = 448

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 111/297 (37%), Gaps = 46/297 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDS----------ACFEIAKSV 65
           +G  + +  WV      G I FL +RD     Q VA  P+             F+  K +
Sbjct: 15  IGEEITIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEEGLEKFDTIKHL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  ++  P+     +E+     
Sbjct: 75  SQETSIYVTGMVKEDERSKFG-------YELDITDIEVIGESQGYPIT---PKEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR          R  II +         FI+  +PIL++++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAIQQIRNAIIYATYDFFDKNGFIKFDSPILSSNAAEDSTELF---- 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E S
Sbjct: 181 --ETDYFGTPAFLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAI 283
           F+  D+ L+  E  ++ + +   +                   ++  F R+ YD+AI
Sbjct: 239 FLSHDESLDLQEAYVKALIQGAIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEAI 295



 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 364 LAPEGYGEIIGGSMREDDYDALVAKMEELGMDRS--EYEFYLDLRKY--GSVPHGGFGIG 419

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 420 IERMVTFVAGTKHIREAIPFP 440


>gi|85096905|ref|XP_960347.1| hypothetical protein NCU07082 [Neurospora crassa OR74A]
 gi|28921835|gb|EAA31111.1| hypothetical protein NCU07082 [Neurospora crassa OR74A]
          Length = 915

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 25/269 (9%)

Query: 15  SDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQ-VVANPDSACFE----IAKSVRSE 68
            ++G  V     VH VR     + F+  RD     Q V++  D    E     A+ + +E
Sbjct: 111 QNIGKTVSFRARVHHVRALSSKLAFVVFRDQIETVQGVLSVRDGVVSENFVRWAEHITAE 170

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--------EREY 120
             + ++G +     E     I   ++ +    + ++ + E LP+ V          E   
Sbjct: 171 SFVHVEGKLQQPPEEIKGCTIHNVEVLIDTMHL-VVPIDEHLPVDVHSIDHVEVDSETNQ 229

Query: 121 PES-----IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
            ES     +R   R   LR  T          I +  R  +  + F+E  TP L  ++ E
Sbjct: 230 LESLASTRVRVSNRIAFLRTPTAQSIFRINAGICSIFRRYLEDKGFMEIHTPKLQPAATE 289

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
              +    +   + +F A  Q+PQ  KQ+ +++ F R F+I P FR ED  + R   E+ 
Sbjct: 290 SGAEVFKVNYFGRTAFLA--QSPQLAKQMSISADFGRVFEIGPVFRAEDSNTHRHLTEYT 347

Query: 236 QLDMEMSFVEQD--DILNTMENVLRGVFE 262
            +D+EM+ +EQD  + ++ ++ +++ +F+
Sbjct: 348 GMDLEMA-IEQDYHEAMHIIDGLMKEIFK 375



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI +GG R H   ++ +     GI    ++    G    F+ G+ PH G   
Sbjct: 482 FDIFLRGQEITTGGQRIHRPHLLEERMKKAGIEPLGMQEYLQG----FEYGVLPHAGCGI 537

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV LLL   ++R  SL P
Sbjct: 538 GLERIVFLLLNLGDIRNASLIP 559


>gi|323449487|gb|EGB05375.1| hypothetical protein AURANDRAFT_30982 [Aureococcus anophagefferens]
          Length = 551

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS--KEVVENRFGGLYRAFQCGMPPHGGI 539
           YD    G EI SG  R H   ++  A    GI    E +         AF+ G PPH G 
Sbjct: 460 YDFFLRGQEICSGAQRVHDPAMLEAALKAKGIDPGAEDLSPSLKSYMTAFEHGAPPHAGC 519

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G++R+V L LG  N+R+ SLFP     C
Sbjct: 520 GFGLERVVFLYLGLDNIRKASLFPRDPKRC 549



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 47/120 (39%), Gaps = 3/120 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R  YR+LDLR       +  +  +    R  M    F E  +P L     E      
Sbjct: 220 QEARLDYRWLDLRTPAQGSVMRVQAAVCKLFRRTMDDAGFTEIHSPKLVGGESESGAGVF 279

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                  GS   L Q+PQ YKQL         F++ P FR E+  + R   EF  LD EM
Sbjct: 280 TTEYF--GSTACLAQSPQLYKQLAR-RDLGAVFEVGPVFRAENSNTRRHLCEFTGLDFEM 336


>gi|254513974|ref|ZP_05126035.1| lysyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219676217|gb|EED32582.1| lysyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 499

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 20/260 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           FL I+D  G  Q+  +      E   S++S W L    +V +R     +     G + ++
Sbjct: 81  FLLIQDGEGQIQLYVDRKGLSEETLASIKS-WDLG--DIVAARGPLHRSGK---GDLYIN 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRM 156
            ++  +L+ A   PLP        + +R++ R++DL  +   + + + R+R+I+ +R  M
Sbjct: 135 MREARLLTKALR-PLPDKYHGLADQELRYRQRYVDLIVNERSREVFRIRSRVISYIRKFM 193

Query: 157 IAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
              +F+E  TP++        A+ F+        + Y L  AP+ Y + L   GF+R ++
Sbjct: 194 DGRDFMEVETPMMQPIPGGAAAKPFVTHHNALDLTMY-LRIAPELYLKRLTVGGFERVYE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV----- 270
           I   FR+E   +   P EF  L+   ++ +  D ++  E++LRG+ +E      V     
Sbjct: 253 INRNFRNEGLSTRHNP-EFTMLEYYWAYADYQDAMDLTEHMLRGLTQEVLGSQQVNYQGQ 311

Query: 271 ----SNNFLRICYDDAIRRY 286
               S  F R+   +AI  Y
Sbjct: 312 VFDFSQPFARMTVTEAILAY 331



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G E+A+G    + +E   Q F +    K+  +     F   Y RA + GMPP 
Sbjct: 408 RFEFFVAGRELANGFSELNDAEDQAQRFKDQVAQKDAGDEEAMHFDADYVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTDSPSIRDVLLFP 494


>gi|154684600|ref|YP_001419761.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|154350451|gb|ABS72530.1| LysS [Bacillus amyloliquefaciens FZB42]
          Length = 499

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 35/281 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  ++D  G  Q+    DS     +EI KS     V+ I G V
Sbjct: 65  VTIAGRMMTKRGKGKAGFAHLQDLEGQIQIYVRKDSVGEEQYEIFKSSDLGDVIGITGKV 124

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
              +          G++ + A   E+L+ A   LP    G ++  +  R++ R+LDL  +
Sbjct: 125 FKTNV---------GELSVKATSFELLTKALRPLPDKYHGLKDVEQ--RYRQRYLDLIVN 173

Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
              K   + R++II +MR  +    ++E  TP +  S P GA  R F+          Y 
Sbjct: 174 PDSKQTFITRSKIIQAMRRYLDDHGYLEVETPTM-HSIPGGASARPFITHHNALDMPLY- 231

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++  
Sbjct: 232 MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDIMSLT 290

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
           EN++  + +E     T+              +YG ++ DL+
Sbjct: 291 ENLVAHIAQEVLGSTTI--------------QYGEEQIDLK 317



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 459 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFP 494


>gi|302345865|ref|YP_003814218.1| asparagine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302149547|gb|ADK95809.1| asparagine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 463

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 119/275 (43%), Gaps = 34/275 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  +D G  + + GWV   R    + F+ + D   I   QVV +P +   +  
Sbjct: 3   RTKIVDALACTDFGKDINVKGWVRSHRSSKAVDFIALNDGSTIKNIQVVVDPSTIDEDKL 62

Query: 63  KSVRSEWVLCIDG-LVMSRSAETINANIITGQI-ELSAQKIEILSVA-EELPLPVFGER- 118
           KS+ +   + + G LV S+ A         GQ  E+  ++IEI  +   + P+   G+  
Sbjct: 63  KSITTGACISVIGTLVESQGA---------GQTSEIQCKEIEIYGLCPSDYPMQKKGQSF 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           EY      KY  + LR +T       R  +  ++        F    TP++T S  EGA 
Sbjct: 114 EYMR----KYGHMRLRTNTFGAVFRIRHNMAIAIHQYFHEHGFYYFHTPLITGSDAEGAG 169

Query: 179 D-FLVPS----RVNQG-------SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDE 223
           + F V +    RV +G        F+          QL   L A+     +   P FR E
Sbjct: 170 NMFQVTTLDLDRVAKGGEVDYSADFFGKRTNLTVSGQLEGELGATALGAIYTFGPTFRAE 229

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +  + R   EF+ ++ E++F+++D++++  E+ ++
Sbjct: 230 NSNTPRHLAEFWMVEPEVAFIDKDELMDLEEDFIK 264



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 4/73 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    E +++   + G+ +++    +       + G  PHGG   G +R+++ 
Sbjct: 386 EIIGGSVREESYEKLVEEIESRGMKRDI----YDWYLDTRKYGTCPHGGFGLGFERLILF 441

Query: 550 LLGAKNVREVSLF 562
           + G +N+R+V  F
Sbjct: 442 VTGMQNIRDVIPF 454


>gi|311740160|ref|ZP_07713992.1| lysine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304715|gb|EFQ80786.1| lysine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 525

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 115/254 (45%), Gaps = 16/254 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMSRS 81
           ++G +  +R  G + F  ++D  G TQV A    A  E+ K     W   +D G  +S  
Sbjct: 81  IAGRLIFMRNTGKLCFATLQDGDG-TQVQAMLSLA--EVGKERLDAWKSDVDLGDFISVR 137

Query: 82  AETINANIITGQIELSAQKIEILSVAEEL-PLPV-FGEREYPESIRFKYRFLDLR-RDTL 138
              I++     + ELS    E    A+ L PLPV F +    E  R + R+ DL  R+  
Sbjct: 138 GRVISSR----RGELSIMVSEWTMAAKSLRPLPVSFAD--MAEDTRVRQRYNDLIIREEA 191

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
            KN + R +++ ++R  + +++F+E  TP+L T      AR F+  S       Y L  A
Sbjct: 192 RKNAMIRVKVMRALRNYLESQDFVEIETPMLQTLHGGAAARPFITHSNALDIDLY-LRIA 250

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y +  +  G DR F+I   FR+E       P EF  L+   ++ + DD        +
Sbjct: 251 PELYLKRAVVGGIDRVFEINRNFRNEGVDRSHSP-EFAMLETYAAWGDYDDCARMTRESI 309

Query: 258 RGVFEEFSNGNTVS 271
           + V  +     TV+
Sbjct: 310 QAVARDVFGSTTVT 323



 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        I+    E   +  +       V++  F     A + GM
Sbjct: 433 KWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMVLDEDF---LAAMEQGM 489

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   G+DR++M L G   +RE  LFP+
Sbjct: 490 PPTAGTGMGMDRLLMALTGL-GIRETVLFPL 519


>gi|193212439|ref|YP_001998392.1| lysyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|238692632|sp|B3QMN9|SYK_CHLP8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|193085916|gb|ACF11192.1| lysyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 511

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 129/293 (44%), Gaps = 41/293 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +  +R  G   F  I+D  G  Q+    D    +   + +   +L I  +V   
Sbjct: 67  VSVAGRIMAIRKMGKASFFHIQDSVGRIQIYLKRDEVGVDSYNTFK---LLDIGDIV--- 120

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----------ESIRFKYR 129
             +  +    TG+I + A++ E+LS +   P+P+  E+E               +R++ R
Sbjct: 121 GVKGFSFRTKTGEISVHAKEFELLSKSLR-PIPIAKEKEVDGEKVVYDAFADRELRYRQR 179

Query: 130 FLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
           ++DL      RDT     +KRT+I+  MR    +  ++E  TPIL        AR F   
Sbjct: 180 YVDLIVNPEVRDTF----IKRTKIVALMRNYFASNGWLEVETPILQPIYGGAAARPFTTH 235

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDMEMS 242
                   Y L  A + Y + L+  GFD  ++ A  FR+E    DR    EF Q+++ ++
Sbjct: 236 HNALDMQLY-LRIANELYLKRLIVGGFDGVYEFAKDFRNEG--IDRFHNPEFTQVELYVA 292

Query: 243 FVEQDDILNTMENVLRGVFEEFSN-------GNTVSNN--FLRICYDDAIRRY 286
           + +   ++  +E++L     E +        GN ++    F R+   D+I+ Y
Sbjct: 293 YKDYVWMMELVEDLLHKACVEVNGKDSTMFLGNEINLKPPFRRLTIADSIKEY 345



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  GIDR+VMLL G  ++R+V  FP
Sbjct: 470 RALEYGMPPCAGLGIGIDRMVMLLTGEDSIRDVIFFP 506


>gi|291526254|emb|CBK91841.1| Lysyl-tRNA synthetase (class II) [Eubacterium rectale DSM 17629]
          Length = 687

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 106/214 (49%), Gaps = 26/214 (12%)

Query: 91  TGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRI 148
           TG+I + A++I +LS + + LP    G  +     R++ R++DL  +   K + +KR++I
Sbjct: 165 TGEISIHAEEITLLSKSLQILPEKFHGLTDT--DTRYRQRYVDLIMNQESKEVFIKRSQI 222

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ------APQQYK 202
           +  +R  +   +F+E  TP+L +++   A      +R  +  + AL +      + + Y 
Sbjct: 223 LKEIRNFLAGRDFMEVETPMLVSNAGGAA------ARPFETHYNALNEDVKLRISLELYL 276

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++   E++ R + E
Sbjct: 277 KRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMELTESMFRYLAE 335

Query: 263 EFSNGNTVSNN---------FLRICYDDAIRRYG 287
           +      +S N         F R+   DAI++Y 
Sbjct: 336 KVCGSTKISYNGVEIDLGKPFARMTMIDAIKKYA 369



 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 29/41 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+VMLL  ++ +R+V LFP  ++ 
Sbjct: 495 ALEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLFPTMKSL 535


>gi|237712336|ref|ZP_04542817.1| lysyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|265752046|ref|ZP_06087839.1| lysyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|229453657|gb|EEO59378.1| lysyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263236838|gb|EEZ22308.1| lysyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 576

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 13/213 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV    D  C +  K + +     +  L    
Sbjct: 55  VSVAGRMMSRRVMGKASFIELQDSKGRIQVYITRDDICPDENKELYNTVFKRLLDLGDFV 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             E        G+I + A+K+ +LS + + PLP+        + + E PE +R++ R++D
Sbjct: 115 GIEGFVFRTQMGEISIHAKKLTVLSKSIK-PLPIVKYKDGVAYDKFEDPE-LRYRQRYVD 172

Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   K+I +KR+++ +SMR    ++ ++E  TPIL + +    AR F+         
Sbjct: 173 LAVNEEVKDIFIKRSKVFSSMREYFNSKGYMEVETPILQSIAGGAAARPFITHHNALDMP 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            Y +  A + Y + L+  GF+  ++I   FR+E
Sbjct: 233 LY-MRIASELYLKRLIVGGFEGVYEIGKNFRNE 264



 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+ ML+ G   ++EV  FP
Sbjct: 460 RALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFP 496


>gi|168185695|ref|ZP_02620330.1| asparaginyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169296388|gb|EDS78521.1| asparaginyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 463

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 127/323 (39%), Gaps = 61/323 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V++SGW+  +R      F+++ D   +   QVV   +   F EI+K   S  V     LV
Sbjct: 21  VKISGWIRTLRASNKFGFIEVNDGSFFKNIQVVFGAELENFKEISKYAISSSVTIEGELV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           ++  A+           E+ A+K+ +L    +   P+  +R   E +R       LR  +
Sbjct: 81  ITEGAKQ--------PFEIHAKKV-VLEGKSDADYPLQKKRHTFEYLR---SIAHLRPRS 128

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              + V R R + +       ++  F+   TPI+T S  EGA +     RV       LP
Sbjct: 129 NAFSAVFRVRSLAAYAIHKFFQDQGFVYVHTPIITGSDCEGAGEMF---RVTTLDMENLP 185

Query: 196 QAPQ---QYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           +  Q    YKQ                  + A  F   +   P FR E+  + R   EF+
Sbjct: 186 KDEQGNVDYKQDFFGKQSNLTVSGQLEAEIYALAFRNVYTFGPTFRAENSNTARHASEFW 245

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNF 274
            ++ EM+F E  D ++  E +++ +            EF N            N V+++F
Sbjct: 246 MIEPEMAFAELKDYMDVAEEMVKYIINYVRDNAPEEMEFFNKFIDKGLLERLDNVVNSHF 305

Query: 275 LRICYDDAIRRYGTDKPDLRNPI 297
            RI Y +A+        +   P+
Sbjct: 306 ARISYTEAVEILQKSGAEFEYPV 328


>gi|81429206|ref|YP_396207.1| lysyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|123769667|sp|Q38V83|SYK_LACSS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78610849|emb|CAI55901.1| Lysyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 505

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 151/372 (40%), Gaps = 57/372 (15%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G + F DIRD  G  Q+    D      ++I K       L I G +
Sbjct: 64  VTIAGRMMSKRGKGKVGFADIRDRSGKIQIYVRKDEVGEDNYKIFKKADLGDHLGITGQI 123

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDLRRD 136
           M             G++ + A  +  LS A   PLP  +      E I ++ R+LDL  +
Sbjct: 124 MKTD---------MGELTVKATHLTFLSKALR-PLPDKYHGLTNVEQI-YRQRYLDLIAN 172

Query: 137 TLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYAL 194
               +   KR++II+++R  +   +F E  TP+L   +    AR F+        + Y L
Sbjct: 173 PESMDRFTKRSKIISAVREYLDTHDFTEVETPVLHGQAGGASARPFITHHNALDINLY-L 231

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G +R ++I   FR+E   +   P EF  L+   ++ +  D+++  E
Sbjct: 232 RIALELHLKRLIVGGMERVYEIGRVFRNEGIDTKHNP-EFTMLETYAAYFDYKDVMDETE 290

Query: 255 NVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE- 304
            ++R    +      +S         ++F R+   DAI+       D   P+ + +  E 
Sbjct: 291 GIIRFAAHKVLGTGQISYQGQAIDLDSDFARVHMVDAIK--AETGVDFWQPMTVESAREL 348

Query: 305 ---------------HFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGNRAFCDRM 344
                          H +++ F  F +   V P    G+ V   P AK    +  F DR 
Sbjct: 349 ADQHHVKYEEYWQVGHIINAFFEEFVEDTLVQPTFIYGHPVEISPLAKKNAEDDRFTDRW 408

Query: 345 ------NEWARS 350
                 NE+A +
Sbjct: 409 ELFMHGNEYANA 420



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 8/52 (15%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GI ++ VE        A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 450 GIDEDYVE--------ALEYGMPPTGGLGIGIDRLVMLLTDAASIRDVLLFP 493


>gi|310829432|ref|YP_003961789.1| hypothetical protein ELI_3882 [Eubacterium limosum KIST612]
 gi|308741166|gb|ADO38826.1| hypothetical protein ELI_3882 [Eubacterium limosum KIST612]
          Length = 488

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 118/255 (46%), Gaps = 17/255 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G +   R  G + F D++D  G  Q+    D    ++  K+     ++ I G V  
Sbjct: 54  VSMAGRIMSKRGQGKVGFYDLQDSTGKIQMFLKKDLLENYDEIKTYDIGDIVGIKGEVFK 113

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                       GQI +  +++ +LS + + LP    G ++    +R++ R++DL  +  
Sbjct: 114 TQK---------GQISVRVKELTLLSKSLQILPEKYHGLKD--TELRYRQRYVDLIVNPE 162

Query: 139 HKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
            KN+ + R++II  +R  +    FIE  TP+L   +    AR F+          Y    
Sbjct: 163 VKNVFILRSQIIRKIREFLDNRGFIEVETPVLYNLAGGANARPFVTHHNALDIPLYMRIA 222

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
                K+L++  GFD+ ++++  FR+E   +   P EF  L+   ++ + DD++N +E +
Sbjct: 223 LELPLKRLIVG-GFDKVYELSRVFRNEGMDATHNP-EFTLLETYEAYADYDDVMNMVEAL 280

Query: 257 LRGVFEEFSNGNTVS 271
              + +E    +TV 
Sbjct: 281 YGFLAKEILGTDTVE 295



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 28/43 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + G+PP GG+  GIDR+VML  G  ++R+V LFP  +   D
Sbjct: 446 ALEVGLPPTGGLGIGIDRLVMLFTGQHSIRDVILFPTMKPLDD 488


>gi|308171972|ref|YP_003918677.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307604836|emb|CBI41207.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328551783|gb|AEB22275.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328910043|gb|AEB61639.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 499

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 35/281 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  ++D  G  Q+    DS     +EI KS     V+ I G V
Sbjct: 65  VTIAGRMMTKRGKGKAGFAHLQDLEGQIQIYVRKDSVGEEQYEIFKSSDLGDVIGITGKV 124

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
              +          G++ + A   E+L+ A   LP    G ++  +  R++ R+LDL  +
Sbjct: 125 FKTNV---------GELSVKATSFELLTKALRPLPDKYHGLKDVEQ--RYRQRYLDLIVN 173

Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
              K   + R++II +MR  +    ++E  TP +  S P GA  R F+          Y 
Sbjct: 174 PDSKQTFITRSKIIQAMRRYLDDHGYLEVETPTM-HSIPGGASARPFITHHNALDMPLY- 231

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++  
Sbjct: 232 MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDIMSLT 290

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
           EN++  + +E     T+              +YG ++ DL+
Sbjct: 291 ENLVAHIAQEVLGSTTI--------------QYGEEQIDLK 317



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 459 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFP 494


>gi|262065895|ref|ZP_06025507.1| lysine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291380375|gb|EFE87893.1| lysine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 493

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 121/278 (43%), Gaps = 28/278 (10%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFE-IAKSVRSEWVLCIDGLV 77
           + +G +  +R  G + F  I D  G  QV    D    A F+ I K +    ++ ++G +
Sbjct: 57  KTAGRIMSLRGKGKVYFAHIEDQSGKIQVYIKKDELGEAEFDHIVKMLNVGDIIGVEGEL 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                E         ++ L  + I +L+     LP    G  +    IR++ R++DL  +
Sbjct: 117 FITHTE---------ELTLRVKSISLLTKNVRSLPEKYHGLTDV--EIRYRKRYVDLIMN 165

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
             +    +KRT+II ++R  +    F+E  TP++        A+ F+          + L
Sbjct: 166 PDVRSTFIKRTQIIKAVRKYLDDRGFLEVETPLMHPILGGAAAKPFVTHHNALNLDLF-L 224

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+R +++   FR+E   +   P EF  +++  S    +D+++  E
Sbjct: 225 RIAPELYLKKLIVGGFERVYELGRNFRNEGISTRHNP-EFTMIELYQSHANFNDMMDLCE 283

Query: 255 NVLRGVFEEFSNGNTVS--------NNFLRICYDDAIR 284
            ++  V +E +    +          NF R+   D I+
Sbjct: 284 GIISSVCQEVNGTTDIEYDGVQLSLKNFQRVHMVDMIK 321



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL GA ++R+V LFP
Sbjct: 452 ALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILFP 487


>gi|261880057|ref|ZP_06006484.1| asparagine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270333298|gb|EFA44084.1| asparagine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 465

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 32/274 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  +D G  + + GWV   R    + F+ + D   I   Q+V NP+S   E  
Sbjct: 5   RTKVIDALRSTDFGQDITVKGWVRSHRSSKAVDFIALNDGSTIKNIQIVVNPESMDDEEL 64

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAE-ELPLPVFGER-E 119
           KS+ +    CI      R+  T+  +   GQ  E+ A++IEI  +   + P+   G+  E
Sbjct: 65  KSITTG--ACI------RATGTLVESQGKGQDCEVQAKEIEIYGLCPGDYPMQKKGQSFE 116

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           Y      +Y  + LR +T       R  +  ++        F    +PI+TAS  EGA +
Sbjct: 117 YMR----QYGHMRLRTNTFGAVFRIRHNMAIAIHKYFHEHGFYYFHSPIITASDAEGAGE 172

Query: 180 FLVPSRVN------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDED 224
               + ++               F+    +     QL   L A+     +   P FR E+
Sbjct: 173 MFQVTTLDLDRVAKSGKVEYDKDFFGKKTSLTVSGQLEGELGATALGAIYTFGPTFRAEN 232

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             + R   EF+ ++ E++F++Q ++++  E+ ++
Sbjct: 233 SNTPRHLAEFWMIEPEVAFMDQKELMDLEEDFIK 266


>gi|302698377|ref|XP_003038867.1| hypothetical protein SCHCODRAFT_73634 [Schizophyllum commune H4-8]
 gi|300112564|gb|EFJ03965.1| hypothetical protein SCHCODRAFT_73634 [Schizophyllum commune H4-8]
          Length = 944

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 100/212 (47%), Gaps = 21/212 (9%)

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           ++ ++ E +L + G + +       A++    +EL  +++ I+S     LP   + +   
Sbjct: 75  SEHIQPEAILQVTGTLKTPKVTVKYASL--HDVELQIKEMHIVSEPTVSLPFRPY-QVNA 131

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR-----MIAENFIECSTPILTASSPE 175
            +  R ++R +DLR  T   N + R   +N+  CR     +    FIE  +P L  S+ E
Sbjct: 132 SDHTRLEHRVIDLR--TPPSNALFR---LNAAVCRYFRNYLDDHGFIEIHSPKLQGSATE 186

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       + +F A  Q+PQ  KQ+ +++   R F+I P FR E+  + R   E+ 
Sbjct: 187 SGSSVFPVEYFGRKAFLA--QSPQLAKQMAISADMGRVFEIGPVFRAENSNTHRHLTEYT 244

Query: 236 QLDMEMSFVEQDD-----ILNTMENVLRGVFE 262
            LD+EM+F          +++ ++N+ + V+E
Sbjct: 245 GLDIEMAFQHHYHETMYLMIDLLKNIFKNVYE 276



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 3/82 (3%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI +GG R H    +L+   + G+   V         +AF+ G PPH G   
Sbjct: 380 FDMFIRGQEIMTGGQRIHEPAALLRRMRDAGV---VPAGSLEEYMKAFEWGCPPHAGAGV 436

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RI+ML+    N+R  S+FP
Sbjct: 437 GLERILMLMFKLGNIRFASMFP 458


>gi|307107552|gb|EFN55794.1| hypothetical protein CHLNCDRAFT_57712 [Chlorella variabilis]
          Length = 618

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 121/270 (44%), Gaps = 26/270 (9%)

Query: 5   RTHSCGDL---------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           RTH+   L         G    G+ V ++G V   R  G + F  + D  G  Q+    +
Sbjct: 122 RTHTAAQLQELHAGLGEGQVAEGASVAVAGRVMSRRFMGKLAFFKLVDASGSIQLYI--E 179

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANII---TGQIELSAQKIEILSVAEELPL 112
            A  + A+    E    + GLV S     +   I     G++ ++ + +E+L+ +  LPL
Sbjct: 180 RAVLDEAQP---EAFAAVKGLVDSGDIVGVRGGIKRTEKGELSVTVESLEVLTKSL-LPL 235

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV----KRTRIINSMRCRMIAENFIECSTPI 168
           P           R++ R+LD+    +   +V     R++ I++MR  +  ++F+E  TP+
Sbjct: 236 PDKWHGLSDVEQRYRKRYLDM---IVTPGVVDTFKARSKTISTMRRMLEEQDFLEVETPV 292

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L +S+        V      G  + +  A + + + L+  G +R F+I   FR+E   + 
Sbjct: 293 LESSAGGADARPFVTYHNALGRNFTMRIATELHLKRLVVGGLERVFEIGRIFRNEGISAR 352

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             P EF  +++  ++ +  D+++  E ++R
Sbjct: 353 HNP-EFTSIELYQAYADYSDMMDLTEAIIR 381



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 580 ALEYGMPPTGGMGMGIDRLVMLLTDSPSIRDVIAFPL 616


>gi|255325852|ref|ZP_05366944.1| lysine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297064|gb|EET76389.1| lysine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 525

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 115/254 (45%), Gaps = 16/254 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMSRS 81
           ++G +  +R  G + F  ++D  G TQV A    A  E+ K     W   +D G  +S  
Sbjct: 81  IAGRLIFMRNTGKLCFATLQDGDG-TQVQAMLSLA--EVGKERLDAWKSDVDLGDFISVR 137

Query: 82  AETINANIITGQIELSAQKIEILSVAEEL-PLPV-FGEREYPESIRFKYRFLDLR-RDTL 138
              I++     + ELS    E    A+ L PLPV F +    E  R + R+ DL  R+  
Sbjct: 138 GRVISSR----RGELSIMVSEWTMAAKSLRPLPVSFAD--MAEDTRVRQRYNDLIIREEA 191

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
            KN + R +++ ++R  + +++F+E  TP+L T      AR F+  S       Y L  A
Sbjct: 192 RKNAMIRVKVMRALRNYLESQDFVEIETPMLQTLHGGAAARPFITHSNALDIDLY-LRIA 250

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y +  +  G DR F+I   FR+E       P EF  L+   ++ + DD        +
Sbjct: 251 PELYLKRAVVGGIDRVFEINRNFRNEGVDRSHSP-EFAMLETYAAWGDYDDCARMTRESI 309

Query: 258 RGVFEEFSNGNTVS 271
           + V  +     TV+
Sbjct: 310 QAVARDVFGSTTVT 323



 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        I+    E   +  +       V++  F     A + GM
Sbjct: 433 KWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMVLDEDF---LAAMEQGM 489

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   G+DR++M L G   +RE  LFP+
Sbjct: 490 PPTAGTGMGMDRLLMALTGL-GIRETVLFPL 519


>gi|212691214|ref|ZP_03299342.1| hypothetical protein BACDOR_00705 [Bacteroides dorei DSM 17855]
 gi|212666446|gb|EEB27018.1| hypothetical protein BACDOR_00705 [Bacteroides dorei DSM 17855]
          Length = 576

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 13/213 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV    D  C +  K + +     +  L    
Sbjct: 55  VSVAGRMMSRRVMGKASFIELQDSKGRIQVYITRDDICPDENKELYNTVFKRLLDLGDFV 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             E        G+I + A+K+ +LS + + PLP+        + + E PE +R++ R++D
Sbjct: 115 GIEGFVFRTQMGEISIHAKKLTVLSKSIK-PLPIVKYKDGVAYDKFEDPE-LRYRQRYVD 172

Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   K+I +KR+++ +SMR    ++ ++E  TPIL + +    AR F+         
Sbjct: 173 LAVNEEIKDIFIKRSKVFSSMREYFNSKGYMEVETPILQSIAGGAAARPFITHHNALDMP 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            Y +  A + Y + L+  GF+  ++I   FR+E
Sbjct: 233 LY-MRIASELYLKRLIVGGFEGVYEIGKNFRNE 264



 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+ ML+ G   ++EV  FP
Sbjct: 460 RALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFP 496


>gi|227512327|ref|ZP_03942376.1| lysyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227084502|gb|EEI19814.1| lysyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 501

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 138/305 (45%), Gaps = 26/305 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F D++D  G  Q+    D    +I    +   +    G  +  
Sbjct: 61  VTVAGRMMAKRGKGKVGFADLKDRTGKIQIYVRKDIVGDDIYHIFKRSDI----GDHLGI 116

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTL 138
           S + I  ++  G++ + A+ +  LS A   PLP        +  +++ R+LDL   +D+ 
Sbjct: 117 SGQIIKTDM--GELTVRAESVTFLSKALR-PLPDKWHGLQDKEQKYRQRYLDLISNQDSF 173

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
            +   KR+ II ++R  + + +++E  TP+L   +    AR F+          Y L  A
Sbjct: 174 DR-FHKRSHIITAIRNYLDSHDYLEVETPVLHNQAGGANARPFITHHNALNIDLY-LRIA 231

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G +R ++I   FR+E   +   P EF  L+  +++ +  D+++  E + 
Sbjct: 232 LELHLKRLIVGGMERVYEIGRVFRNEGMDTRHNP-EFTMLESYVAYYDFHDVMDETEGIF 290

Query: 258 RGVFEEFSN-------GNTVSNN--FLRICYDDAIRRY-GTD--KPDLRNPIIMHNVTEH 305
           +   +  ++       G+T+  +  F R    DAI+ Y G D  KP + +        EH
Sbjct: 291 KAAAKTVTDDGMITYQGHTIDLDKPFKRQHMVDAIKEYTGIDFWKP-MDDDDAKKLADEH 349

Query: 306 FVHSE 310
            +H E
Sbjct: 350 HIHYE 354



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 8/52 (15%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GI ++ +E        A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 447 GIDEDYIE--------ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 490


>gi|302343542|ref|YP_003808071.1| lysyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301640155|gb|ADK85477.1| lysyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 513

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 21/242 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +  +R  G   F+ +RD  G  Q+    DS     FE+ + +    ++ + G +  
Sbjct: 79  IAGRIMAIRSFGKAAFVKLRDRSGQIQLHVQKDSLSPEEFELFRKLDVGDIIGVKGALFR 138

Query: 80  RSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
                      T ++ L  + + +++ +   LP    G  +  +  R++ R+LDL   D 
Sbjct: 139 TK---------TRELTLRVEMLRLVTKSYRSLPEKFHGLTDVEQ--RYRQRYLDLIMNDE 187

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALP 195
           +      R++I+N++R  +    F+E  TP++    P GA  R F           Y L 
Sbjct: 188 VRGIFTARSKIVNTIRGHLTELGFMEVETPMMQVI-PGGATARPFETYHNALGMKLY-LR 245

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G +R F++   FR+E   S R   EF  L+  MS+   +D+++  E 
Sbjct: 246 VAPELYLKRLVVGGLERVFELNRNFRNEGI-SIRHNPEFTMLEFYMSYASYEDLMSITEQ 304

Query: 256 VL 257
           +L
Sbjct: 305 ML 306



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL    ++REV LFP+
Sbjct: 470 RALEYGMPPTAGEGVGIDRLVMLLTDQPSIREVILFPL 507


>gi|146413284|ref|XP_001482613.1| hypothetical protein PGUG_05633 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 481

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 45/292 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSAC-FEIAKSVR--SEWVL 71
           V S V+  G V  VR    + F+D+ D   +    VV N D+   F++ +SV    +WV 
Sbjct: 39  VDSLVKTQGHVKAVRSFKNLHFVDLSDGSTHSTLNVVLNGDTNINFKVGQSVSFVGKWV- 97

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
                    S  + +  ++    E   +   I  V E  P+         +     Y+FL
Sbjct: 98  --------ESKGSQDYELLYDSTENEHKAAVIGEVPELYPI---------QKKSLSYQFL 140

Query: 132 ----DLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGA-RDFLVPS 184
                LR  T     V R R  +  +  R   +N  I+   P++T+S  EGA   F+V +
Sbjct: 141 RTLPTLRHRTSSLASVLRLRSFLEGLFQRFFEQNDVIKVLAPLITSSDCEGAGEQFIVEA 200

Query: 185 RVN--QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           + +  +  F+  P       QL   +++   +R + + PCFR E+  ++R   EF+ L+ 
Sbjct: 201 KDSKPENPFFGKPAYLTVSTQLHLEVLSQSLNRVWALTPCFRAEESHTNRHLSEFWMLEA 260

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           E+S++E    I +  EN++R V ++             I  D A  RY  D+
Sbjct: 261 ELSYIESVHQICDFTENMIRYVTQDVVQS---------IANDLAQSRYNKDE 303



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 13/116 (11%)

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGI 513
           A  PF MP    ES   N  ++     +DL+  G  E+  G +R H  E +LQ   N  +
Sbjct: 376 AQKPFYMP----ESENQNSTVAC----FDLIIPGIGELVGGSVREHNYEKLLQELKNRNM 427

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           S E  +N +    R  + G  PHGG   G++R+V  L G  ++++V  FP +   C
Sbjct: 428 SIE--DNEWYLSIR--ENGTVPHGGFGMGMERLVAFLSGMASIKDVIAFPRTPGSC 479


>gi|297171664|gb|ADI22658.1| lysyl-tRNA synthetase (class II) [uncultured Gemmatimonadales
           bacterium HF0500_22O06]
          Length = 508

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 34/266 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE-IAKSVRSEWVLCI 73
           G    ++G +   R HG   F  I D  G  QV    D     CFE ++     +W+   
Sbjct: 58  GERSSVAGRILSWRDHGKSHFAHIGDAGGSIQVYFKSDIIGDECFEELSLLDLGDWIGVE 117

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------------- 120
                +R          TG+I + A+   +L+ +   PLP FG+ E              
Sbjct: 118 GRAFRTR----------TGEITIRAESYTLLTKSLR-PLP-FGKTEENTETGERIEHSGF 165

Query: 121 --PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
             PE+ R++ R+ DL      +N+ + RT+II ++R  + +ENF+E  TP+L       +
Sbjct: 166 SDPET-RYRQRYADLAVHPALRNVFETRTKIIRALRGFLDSENFLEVETPVLQPLYGGAS 224

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
               V      G    L  A + Y + L+  G DR ++I+  FR+E       P EF  L
Sbjct: 225 AKPFVTHHEALGLTMYLRIADELYLKRLLVGGLDRVYEISKDFRNEGLSRVHNP-EFTML 283

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEE 263
           +   +F + +D +  +E ++  V +E
Sbjct: 284 EWYQAFTDYNDQMVLVERMVGHVLDE 309



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP GG+  G+DR VM++    ++R+V LFP+
Sbjct: 466 RALEYGMPPTGGVGLGVDRFVMMITDQPSIRDVILFPI 503


>gi|257791982|ref|YP_003182588.1| lysyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|317489991|ref|ZP_07948483.1| lysyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|257475879|gb|ACV56199.1| lysyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|316910989|gb|EFV32606.1| lysyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 647

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 113/252 (44%), Gaps = 31/252 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVLCIDGL 76
           V+++G V   R  G + FL++RD  G  Q+     A  + A  E+      +W+  ++G 
Sbjct: 65  VKVAGRVMAKRDQGKLAFLELRDSTGDMQLFCRINALGEDAFAELKDLDVGDWI-GVEGT 123

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--- 133
           +M             GQ+ +S    E+LS +   PLP        +  R++ R++DL   
Sbjct: 124 MMRTK---------RGQLSVSVASFELLSKSLR-PLPEKFHGLADKETRYRQRYVDLVMN 173

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
              RDT      KR ++++++R  M    + E  TPIL        AR F+         
Sbjct: 174 REVRDTFE----KRFKVVSAIRRYMEDHGYYEVETPILHPILGGANARPFVTHHNALDKD 229

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDD 248
           FY L  A + + + L+  GF++ F+I   FR+E  DP  +    EF  ++   +F + + 
Sbjct: 230 FY-LRIATELHLKRLLVGGFEKVFEIGRQFRNEGMDPYHN---PEFTTMEFYQAFSDLEG 285

Query: 249 ILNTMENVLRGV 260
           ++   + V++  
Sbjct: 286 MMELTQGVIQAA 297



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR+VMLL  A ++R+V LFP
Sbjct: 458 RALEYGMPPAGGCGIGIDRLVMLLTDAPSIRDVLLFP 494


>gi|160895077|ref|ZP_02075851.1| hypothetical protein CLOL250_02627 [Clostridium sp. L2-50]
 gi|156863508|gb|EDO56939.1| hypothetical protein CLOL250_02627 [Clostridium sp. L2-50]
          Length = 539

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 108/213 (50%), Gaps = 26/213 (12%)

Query: 91  TGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRI 148
           TG++ + A+++ +LS + + LP    G  +    +R++ R++DL  +   K + +KR++I
Sbjct: 165 TGELSIHAEEMTLLSKSLQILPEKFHGLTD--TDVRYRQRYVDLIMNQESKAVFIKRSQI 222

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ------APQQYK 202
           +  +R  +   +F+E  TP+L A++   A      +R  +  + AL +      + + Y 
Sbjct: 223 LKEIRNFLADRDFMEVETPMLVANAGGAA------ARPFETHYNALNEDVKLRISLELYL 276

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++   E++ R + E
Sbjct: 277 KRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMELTESMFRYLAE 335

Query: 263 EFSNGNTVSNN---------FLRICYDDAIRRY 286
           +      +S N         F R+  +DAI++Y
Sbjct: 336 KVCGSTKISYNGIEIDFGKPFERLTMNDAIKKY 368



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 29/41 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+VMLL  ++ +R+V LFP  ++ 
Sbjct: 495 ALEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLFPTMKSL 535


>gi|116627566|ref|YP_820185.1| lysyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|122267836|sp|Q03LD3|SYK_STRTD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116100843|gb|ABJ65989.1| Lysyl-tRNA synthetase (class II) [Streptococcus thermophilus LMD-9]
          Length = 496

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 122/278 (43%), Gaps = 19/278 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + ++     ++G +   R  G + F  I+D  G  Q+    D+     +EI K       
Sbjct: 56  LHEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLSDIETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  + A+ F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFDR-FVTRSKIISEIRRYLDAQGFLEVETPVLHNEAGGAAAKPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIALELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTMIEVYQAYADFH 282

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           DI++  E +++   +       V+     I  ++  +R
Sbjct: 283 DIMDLTEGIIQHAAKAVKGDGPVNYQGTEIKINEPFKR 320



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|118580126|ref|YP_901376.1| asparaginyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|166231670|sp|A1APP8|SYN_PELPD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|118502836|gb|ABK99318.1| asparaginyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 459

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 125/315 (39%), Gaps = 56/315 (17%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWV 70
           GVS  G    ++GWV  +R   GI F+ + D   +   QVV    S  F    ++ +   
Sbjct: 12  GVS--GQTYAIAGWVRSLRISKGIAFIALNDGSNLAGIQVVVEEQSPAFSEIDAIATGCS 69

Query: 71  LCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           L + G        T+ A+   GQ  EL A+ I I+  ++E   P+  +R   E +R +  
Sbjct: 70  LRVTG--------TLVASPAAGQERELRAESIAIVGTSDE-NYPLQKKRHSFEYLR-EIA 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L  R +T       R+R+  ++       NF+   TPI+TAS  EGA +    + ++  
Sbjct: 120 HLRPRSNTFGAVFRLRSRLAQAIHRFFGDNNFLYVHTPIITASDCEGAGELFRVTTLDAA 179

Query: 190 SFYALPQAPQ----------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           S   L   P                 Q +  L A  F   +   P FR E+  + R   E
Sbjct: 180 SPPLLEGRPDFGQDFFGQKTGLTVSGQLEGELFALAFSDIYTFGPTFRAENSNTPRHAAE 239

Query: 234 FYQLDMEMSFVEQDDILNTMENVLR-----------------------GVFEEFSNGNTV 270
           F+ ++ EM+F +  D     E  +R                       G+ E        
Sbjct: 240 FWMIEPEMAFADLADDAALAEKFVRYLCRFALEECAEEMAFFDRQIEKGLLERVR--RVA 297

Query: 271 SNNFLRICYDDAIRR 285
             +F+R+ YD+AI+R
Sbjct: 298 EADFVRMEYDEAIQR 312



 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 12/92 (13%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGI 539
           LV    EI  G  R    +V+    + +GI++E     +E+R        + G  PH G 
Sbjct: 376 LVPKVGEIIGGSQREERLDVLEARMAELGIAREPLWWYLESR--------RWGSCPHAGF 427

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             G +R+VM L G +N+R+V  FP +    + 
Sbjct: 428 GLGFERLVMYLSGMENIRDVIPFPRTPRHAEF 459


>gi|227888862|ref|ZP_04006667.1| lysyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|268318842|ref|YP_003292498.1| lysyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
 gi|227850699|gb|EEJ60785.1| lysyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|262397217|emb|CAX66231.1| lysyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
          Length = 514

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 147/358 (41%), Gaps = 47/358 (13%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGL 76
             +++G +   R  G + F D+ D  G  Q+    D      ++I K       L IDG 
Sbjct: 60  MTKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIDGE 119

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRR 135
           VM            TG++ + A  I  LS A   LP    G ++  +  R +Y  L    
Sbjct: 120 VMKTD---------TGELTIRATHITFLSKALRPLPNKWDGLKDVEQIYRQRYLDLITNH 170

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
           D+  +  V RT+II ++R  +   +F+E  TP+L  + P G  AR F+          Y 
Sbjct: 171 DSYMR-FVHRTQIIQAIRDYLNNRDFLEVETPVL-HNIPGGAEARPFITHHNALDIDLYM 228

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                   K+L++  G +R ++I   FR+E   +   P EF +L+   ++ +  D+++  
Sbjct: 229 RIALELPLKRLIVG-GMERVYEIGRVFRNEGLDTKHNP-EFTELETYAAYWDFHDVMDEA 286

Query: 254 ENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR-RYGTD--KP----DLRNPI 297
           E ++R   +  S    ++           F R+   D I+ + G D  KP    + R   
Sbjct: 287 EGIIRAAAKVVSPDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVDFWKPMTIEEARKVA 346

Query: 298 IMHNV-------TEHFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGNRAFCDR 343
             HNV         H +++ F  F +   V P    G+ V   P AK    +  F DR
Sbjct: 347 DEHNVHYESYWKVGHIINAFFEEFGEGSIVQPTFVYGHPVEVSPLAKKNADDPRFTDR 404



 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 454 RAMEFGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 490


>gi|116193069|ref|XP_001222347.1| hypothetical protein CHGG_06252 [Chaetomium globosum CBS 148.51]
 gi|88182165|gb|EAQ89633.1| hypothetical protein CHGG_06252 [Chaetomium globosum CBS 148.51]
          Length = 551

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 120/299 (40%), Gaps = 59/299 (19%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRD--HYGITQVVA---------------- 52
           LG   VG  ++L  W+   R  G  + F+++R+  ++ I  VVA                
Sbjct: 97  LGDEHVGKSIKLRAWIQNARMQGAKMAFVELREEGNWSIQGVVAANPEGTPVSRQMVKWV 156

Query: 53  ---NPDS---------ACFEIAKSVR-SEWVLCIDGLVMSRSAETI-------------N 86
              NP+S            E  KS R S + L I    +  +A T+             N
Sbjct: 157 GAINPESFVVVEAKVQKPLEPVKSCRVSNYELHITKCFVHAAAPTVLGMTLAAANRPVAN 216

Query: 87  ANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-R 145
            +     +E   +K+ I S  E    P      + ++I         +R  + + I   R
Sbjct: 217 FSDEEVPVEQEVEKLTIASAGEATGTPAASMLTHLDNIVMH------KRSAVQQAIADIR 270

Query: 146 TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
             +    R  + +  F E   P L A++ EG  +        + +F  L Q+PQ YKQ+ 
Sbjct: 271 GEMKELYRSYLRSHGFKEFEPPCLIAAASEGGANVFRMPYFEKEAF--LAQSPQFYKQIE 328

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD---ILNTMENVLRGVF 261
           +A G  R F + P FR E+  + R   EF  LDMEM    +DD   +++ +E VL  +F
Sbjct: 329 IAGGRKRVFSVGPVFRAENSNTPRHMTEFTGLDMEMEI--KDDYREVVHVLEGVLFHIF 385


>gi|315640561|ref|ZP_07895669.1| lysine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315483765|gb|EFU74253.1| lysine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 497

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/314 (21%), Positives = 133/314 (42%), Gaps = 38/314 (12%)

Query: 2   HRY-RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH   +L           + ++G    ++G +   R  G + F  ++D  G  Q+
Sbjct: 35  HRFERTHQSAELHELFDPRTKEELEEMGLTASVAGRIVTKRGKGKVGFAHLQDREGRIQI 94

Query: 51  VANPDSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
               D      +++ K         + G +M            TG++ +   +I ILS A
Sbjct: 95  YVRKDQVGDEPYDVFKHADLGDFFGVTGQIMKTD---------TGEVTIKPTEITILSKA 145

Query: 108 EELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
              PLP           R++ R+LDL           KR++II+ +R  +    ++E  T
Sbjct: 146 LR-PLPDKYHGLTNVEQRYRQRYLDLISNQESFDRFTKRSKIISEIRRYLDGLGYLEVET 204

Query: 167 PIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           P+L   +    AR F+          Y L  A + + + L+  G ++ ++I   FR+E  
Sbjct: 205 PVLHNQAGGAAARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGI 263

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLR 276
            +   P EF  ++   ++ +  D+++  E ++R V E+  +  +++         ++F R
Sbjct: 264 DTTHNP-EFTMMECYTAYTDYRDVMDLTEAIIRTVAEKTLDTTSITYGGAPVDLGSDFRR 322

Query: 277 ICYDDAIR-RYGTD 289
           +   DA++ + G D
Sbjct: 323 VHMADAVKEKTGVD 336



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP
Sbjct: 459 ALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 494


>gi|325678473|ref|ZP_08158089.1| lysine--tRNA ligase [Ruminococcus albus 8]
 gi|324109841|gb|EGC04041.1| lysine--tRNA ligase [Ruminococcus albus 8]
          Length = 525

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/284 (21%), Positives = 127/284 (44%), Gaps = 31/284 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G +   R  G   F+D+RD  G  Q+    +    E+ K     +V   D G ++ 
Sbjct: 89  VSIAGRIMSKRMMGKASFMDLRDKSGKVQLYVRMN----EVGKEAFDRYVKKGDIGDIVG 144

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTL 138
            +       +  G+I + A+   +LS   + PLP        +  R++ R+ DL     +
Sbjct: 145 VTGFVFRTRM--GEISVHAESFTLLSKNLQ-PLPEKWHGLKDQDTRYRQRYTDLICNPEV 201

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ-- 196
               +KR++II+++R  +    F+E  TP+L +++   A      +R  +  + AL +  
Sbjct: 202 KDTFIKRSKIISTIRRYLDERGFMEVETPMLVSNAGGAA------ARPFETHYNALDEDV 255

Query: 197 ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
               + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   +++ 
Sbjct: 256 KLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDARHNP-EFTLMELYQAYTDYHGMMDL 314

Query: 253 MENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
            E++ R + +    G T+            F R+   DA+++Y 
Sbjct: 315 TEDMFRHLAQTVCGGTTIPYGEHEIDLGKPFERLTMIDAVKKYA 358



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GGI  GIDR+VMLL  +  +R+V LFP
Sbjct: 483 RALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLFP 519


>gi|238922489|ref|YP_002936002.1| lysyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238874161|gb|ACR73868.1| lysyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 537

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 130/284 (45%), Gaps = 32/284 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +I+D  G  QV    D+   +     +   +  I G+    
Sbjct: 101 VSIAGRMMFKRVMGKASFCNIQDLKGNIQVYVARDNVGEDSYADFKKSDIGDIYGV---- 156

Query: 81  SAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
             +       TG+I + A++I +LS + + LP    G  +     R++ R++DL  +   
Sbjct: 157 --KGFAFRTKTGEISIHAEEITLLSKSLQILPEKFHGLTD--TDTRYRQRYVDLIMNQES 212

Query: 140 KNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ-- 196
           K + +KR++I+  +R  +   +F+E  TP+L +++   A      +R  +  + AL +  
Sbjct: 213 KEVFIKRSQILKEIRNFLAGRDFMEVETPMLVSNAGGAA------ARPFETHYNALNEDV 266

Query: 197 ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
               + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++  
Sbjct: 267 KLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMEL 325

Query: 253 MENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
            E++ R + E+      +S N         F R+   DAI++Y 
Sbjct: 326 TESMFRYLAEKVCGSTKISYNGVEIDLGKPFARMTMIDAIKKYA 369



 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 29/41 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+VMLL  ++ +R+V LFP  ++ 
Sbjct: 495 ALEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLFPTMKSL 535


>gi|322700758|gb|EFY92511.1| hypothetical protein MAC_01477 [Metarhizium acridum CQMa 102]
          Length = 545

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 130/309 (42%), Gaps = 46/309 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+L GWV  VR   G+ F+DI D   +  V    D A   +A  +R    +C+ G     
Sbjct: 56  VQLCGWVRSVRKSAGVRFVDITDGSSMRPVQVVIDKA---LAADIRPGSAVCLKGR-WHN 111

Query: 81  SAETINANIITGQI-ELSAQKIEILSVA-------EELP---------LPVFG------E 117
           SA+    N     + ++S+Q    +S A       E +P         + V G      +
Sbjct: 112 SADMKQPNTEGSSVSDISSQHTPSVSGADGMEQGTERIPTIQELRVDEVKVLGVSDPQNK 171

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST--PILTASSPE 175
            + PES+R+      LR  T   + + R R   S        N     T  PI+T+S  E
Sbjct: 172 YQTPESLRY---ISHLRSRTPLNSTLLRLRSDASFILTQFFFNQKFQQTHPPIITSSDCE 228

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           GA +       ++  F+  P+      QL    +A      + ++P FR E   + R   
Sbjct: 229 GAGEAFTVKTGSKAEFFRDPKYLTVSTQLHLEALAQSLGNVWTLSPTFRAEQSDTSRHLS 288

Query: 233 EFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSN---GNTVSNNFL-------RICYDD 281
           EFY L+ EMSFV + +++++ ++++L+ + +        N ++ N L       R+ + D
Sbjct: 289 EFYMLEAEMSFVNDMNEVMDLVQSMLKNLAQGLKGLRAANELAQNRLDSRDPAERLAFAD 348

Query: 282 AIRRYGTDK 290
            + +   D+
Sbjct: 349 LVEQEELDR 357



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 21/170 (12%)

Query: 406 PLKFCSFAADARNHIAQELGIINCN-CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
           P+      ++   ++A+E+G+   N  +   +I  +P      E K      +  + PQG
Sbjct: 391 PVWGSGLQSEHEKYLAREVGVDKANSAYLPIFITQYP-----REIKAFYMLRSASSPPQG 445

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH-MSEV---MLQAFSNVGISKEVVEN 520
             E++   DLL         V +  E+A G +R H +SE+   M      V   K+   +
Sbjct: 446 --ETVDCFDLL---------VPSLGELAGGSMREHRLSELEDNMKLHGLEVPGKKQDRSS 494

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             G      + G PPHGG   G DR++  L G  NVR+V  FP     CD
Sbjct: 495 GLGWYLDLRRWGCPPHGGFGLGFDRLLSYLTGVANVRDVVPFPRHYQRCD 544


>gi|290984147|ref|XP_002674789.1| aspartyl-tRNA synthetase [Naegleria gruberi]
 gi|284088381|gb|EFC42045.1| aspartyl-tRNA synthetase [Naegleria gruberi]
          Length = 562

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 114/279 (40%), Gaps = 40/279 (14%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVR 66
           DL  S  GS V +   +H V   G   F+ +R+     Q         ++A  + A+ + 
Sbjct: 94  DLDASKEGSVVTVRSRIHNVTGKGKACFITLREGCFSVQATLFAENEEEAAMAKYAQKLS 153

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV------------ 114
            E V+ + G ++    +   A      +E+  +KI  +S A  LP+ +            
Sbjct: 154 KESVIQLVGTIVKVEQKVEKAT--QQDVEIKIKKIYCISSAAGLPIQIEDCMRVETKEEQ 211

Query: 115 ------------FGEREYPESI----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA 158
                        G+   P+++    R   R +D+R          ++ +    R  +  
Sbjct: 212 MKANMAELEEEKEGDENAPKAVGQKHRLDNRVIDMRAPAQLAIFKIQSAMGRYFREFLYT 271

Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
            +F E  TP L A++ EG  D       N  ++  L Q+PQ YKQ+ +    +R F+I P
Sbjct: 272 LDFTEIHTPKLIATASEGGADVFKVGYFNGAAY--LAQSPQLYKQMAIIGDLERVFEIGP 329

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMS----FVEQDDILNTM 253
            FR E   + R   EF  LD+EM+    + E  ++++ M
Sbjct: 330 VFRAEKSFTHRHLTEFVGLDLEMAIKSHYTEALEVIDKM 368



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 4/86 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI+SG  R H  E++ +  +  G+    ++        AF+ G  PH G   
Sbjct: 477 YDIYLRGEEISSGAQRIHDPELLQKVANEKGVDLTPIQPYVD----AFKYGAWPHAGCGI 532

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G++RIVML LG  NVR+ S+FP   N
Sbjct: 533 GLERIVMLYLGLGNVRKTSMFPRDPN 558


>gi|13357618|ref|NP_077892.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762376|ref|YP_001752141.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|183508493|ref|ZP_02958023.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701849|ref|ZP_02971511.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818]
 gi|11387151|sp|Q9PR83|SYK_UREPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189082973|sp|B1AI47|SYK_UREP2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|11271293|pir||G82937 lysyl-tRNA synthetase UU062 [imported] - Ureaplasma urealyticum
 gi|6899012|gb|AAF30467.1|AE002106_1 lysyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827953|gb|ACA33215.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|182675921|gb|EDT87826.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701144|gb|EDU19426.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818]
          Length = 493

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 22/263 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
           +Y+  S  +L   D+     L+G +  +R   GII    +D     Q+  N  +     F
Sbjct: 44  KYKNFSKEELHNMDLEKLT-LAGRLIGIRQTFGII----QDFSAKLQIYINKKNVAPEVF 98

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              KS+    ++ ++G+ M  +++ I  N+    I L A+ +++L      P    G  +
Sbjct: 99  STFKSLDIGDIIELEGVAMKTNSDEITLNVTN--IRLVAKSLKVL------PEKYHGLVD 150

Query: 120 YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGA 177
             E I+ + R+LDL  +   KN  +KR+ II  MR  +  + F E  TP+L    S   A
Sbjct: 151 --EEIKARQRYLDLIVNDETKNTFIKRSLIIREMRNWLDNKGFFEVETPVLQDILSGAAA 208

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R F+         +Y         K+ ++  GF++ ++I   FR+E   S   P EF  +
Sbjct: 209 RPFITHHNTLNKEYYLRIATEIALKKCIIG-GFEKVYEIGRIFRNEGMDSTHNP-EFTSV 266

Query: 238 DMEMSFVEQDDILNTMENVLRGV 260
           ++ +++V+   I+   E+++R +
Sbjct: 267 ELYIAYVDLWYIMQLTEDLIRHI 289



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VMLL    ++R V LFP
Sbjct: 451 ALEYGMPPTGGLGIGVDRLVMLLTSNDSIRNVLLFP 486


>gi|319946598|ref|ZP_08020832.1| lysine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319746646|gb|EFV98905.1| lysine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 496

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 116/252 (46%), Gaps = 21/252 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D+     ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDLNETAIIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLSDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRV 186
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +    AR F+     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGASARPFITHHNA 223

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  ++++ ++ + 
Sbjct: 224 -QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVDQAYADY 281

Query: 247 DDILNTMENVLR 258
            DI++  E +++
Sbjct: 282 QDIMDLTEGIIQ 293



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L+ F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LERFEAQARAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|114776308|ref|ZP_01451353.1| Lysyl-tRNA synthetase class II [Mariprofundus ferrooxydans PV-1]
 gi|114553138|gb|EAU55536.1| Lysyl-tRNA synthetase class II [Mariprofundus ferrooxydans PV-1]
          Length = 509

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 23/248 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +R++G +   R  G   F+ ++D  G  Q+  N D    ++    R +W L   G ++  
Sbjct: 73  MRVAGRMMAHRVMGKSSFVKLQDGSGQIQLFLNRDVLGADVYNPTR-KWDL---GDIIG- 127

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----RR 135
            AE        G++ +    IE +S     PLP           R++ R++DL      R
Sbjct: 128 -AEGTLFRTRAGELSIRVTHIETVSKCLR-PLPEKWHGLSDVETRYRQRYVDLMVTPESR 185

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA-- 193
           DT  +    R+RI++ +R  +    FIE  TP+L    PE       P   +  +     
Sbjct: 186 DTFRQ----RSRIVSLLRQGLEERGFIEVETPML---QPEAGGAAARPFSTHHNALNMEL 238

Query: 194 -LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  GF+R F++   FR+E   +   P EF  ++   ++ + +D ++T
Sbjct: 239 FLRIAPELYLKRLLVGGFERVFEMNRNFRNEGSDATHNP-EFTMVEFYQAYADFNDAMDT 297

Query: 253 MENVLRGV 260
            E ++R +
Sbjct: 298 TEGLMRSI 305



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VM+L G  ++R+V LFP
Sbjct: 467 RALEFGMPPAAGVGIGVDRLVMMLTGQHSIRDVLLFP 503


>gi|325829779|ref|ZP_08163237.1| lysine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325487946|gb|EGC90383.1| lysine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 647

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 113/252 (44%), Gaps = 31/252 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVLCIDGL 76
           V+++G V   R  G + FL++RD  G  Q+     A  + A  E+      +W+  ++G 
Sbjct: 65  VKVAGRVMAKRDQGKLAFLELRDSTGDMQLFCRINALGEDAFAELKDLDVGDWI-GVEGT 123

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--- 133
           +M             GQ+ +S    E+LS +   PLP        +  R++ R++DL   
Sbjct: 124 MMRTK---------RGQLSVSVASFELLSKSLR-PLPEKFHGLADKETRYRQRYVDLVMN 173

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
              RDT      KR ++++++R  M    + E  TPIL        AR F+         
Sbjct: 174 REVRDTFE----KRFKVVSAIRRYMEDHGYYEVETPILHPILGGANARPFVTHHNALDKD 229

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDD 248
           FY L  A + + + L+  GF++ F+I   FR+E  DP  +    EF  ++   +F + + 
Sbjct: 230 FY-LRIATELHLKRLLVGGFEKVFEIGRQFRNEGMDPYHN---PEFTTMEFYQAFSDLEG 285

Query: 249 ILNTMENVLRGV 260
           ++   + V++  
Sbjct: 286 MMELTQGVIQAA 297



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR+VMLL  A ++R+V LFP
Sbjct: 458 RALEYGMPPAGGCGIGIDRLVMLLTDAPSIRDVLLFP 494


>gi|171920411|ref|ZP_02931731.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|171902853|gb|EDT49142.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813]
          Length = 493

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 22/263 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
           +Y+  S  +L   D+     L+G +  +R   GII    +D     Q+  N  +     F
Sbjct: 44  KYKNFSKEELHNMDLEKLT-LAGRLIGIRQTFGII----QDFSAKLQIYINKKNVAPEVF 98

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              KS+    ++ ++G+ M  +++ I  N+    I L A+ +++L      P    G  +
Sbjct: 99  STFKSLDIGDIIELEGVAMKTNSDEITLNVTN--IRLVAKSLKVL------PEKYHGLVD 150

Query: 120 YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGA 177
             E I+ + R+LDL  +   KN  +KR+ II  MR  +  + F E  TP+L    S   A
Sbjct: 151 --EEIKARQRYLDLIVNDEAKNTFIKRSLIIREMRNWLDNKGFFEVETPVLQDILSGAAA 208

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R F+         +Y         K+ ++  GF++ ++I   FR+E   S   P EF  +
Sbjct: 209 RPFITHHNTLNKEYYLRIATEIALKKCIIG-GFEKVYEIGRIFRNEGMDSTHNP-EFTSV 266

Query: 238 DMEMSFVEQDDILNTMENVLRGV 260
           ++ +++V+   I+   E+++R +
Sbjct: 267 ELYIAYVDLWYIMQLTEDLIRHI 289



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VMLL    ++R V LFP
Sbjct: 451 ALEYGMPPTGGLGIGVDRLVMLLTSNDSIRNVLLFP 486


>gi|170029945|ref|XP_001842851.1| asparaginyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167865311|gb|EDS28694.1| asparaginyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 436

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/313 (22%), Positives = 125/313 (39%), Gaps = 57/313 (18%)

Query: 25  GWVHRVRPHGGIIFLDIRDH---YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           GWV  VR     +FLD+ D    + +  VV+ P         SV       + G  + R+
Sbjct: 10  GWVKSVRKMKDNVFLDVNDGTCGHNLQLVVSKPQLQDTAYGSSVD------VTG-TLGRT 62

Query: 82  AETINANIITGQIEL---SAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
            +         Q+EL   S Q++    +AE  P   + ++ YP      +  L  +  ++
Sbjct: 63  PKN--------QLELKVDSLQELGACPLAEGYPF--YPKKSYPPDYIRNHLHLRPQVSSV 112

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL---- 194
              +  R +        +  E FI+  TPI+T++  EGA +       N G    +    
Sbjct: 113 GSTLRVRHQATKCFNDYLDREGFIQIHTPIITSNDCEGAGEAFQVRPANDGLLKQMAKKG 172

Query: 195 -PQAPQQYKQL-------LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            P  P  +  +        MA G  + +   P FR E+ +S     EF+ L++E +F++ 
Sbjct: 173 GPARPGTFLTVSGQLHLEAMAHGLGKVYTFGPTFRAENSKSPIHLAEFHMLELEEAFMDS 232

Query: 247 DDIL-NTMENVLRGVFEEFSNGNT---------------------VSNNFLRICYDDAIR 284
            D L + +E++++ V +     ++                     V   F RI +DDA++
Sbjct: 233 LDALADRIESMVKCVTKSLLENSSEDLSSVRKLTTDSNLEQSFTWVDKQFPRITFDDAMQ 292

Query: 285 RYGTDKPDLRNPI 297
                K  L++P+
Sbjct: 293 VLQQHKTKLKSPV 305


>gi|115903663|ref|XP_785385.2| PREDICTED: similar to Pleckstrin homology domain containing, family A
            (phosphoinositide binding specific) member 1
            [Strongylocentrotus purpuratus]
 gi|115966295|ref|XP_001176071.1| PREDICTED: similar to Pleckstrin homology domain containing, family A
            (phosphoinositide binding specific) member 1
            [Strongylocentrotus purpuratus]
          Length = 1461

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482  YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
            YD    G EI SG  R H S+ +L+   +  I  E ++        AF+ G PPH G   
Sbjct: 1376 YDCFMRGEEIMSGAQRVHDSKFLLERAKHHNIDIEKIK----AYIDAFRYGAPPHAGGGI 1431

Query: 542  GIDRIVMLLLGAKNVREVSLFP 563
            G++R+ ML LG  N+R+ SLFP
Sbjct: 1432 GLERVTMLYLGLDNIRKTSLFP 1453


>gi|294102359|ref|YP_003554217.1| lysyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293617339|gb|ADE57493.1| lysyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 506

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 116/249 (46%), Gaps = 16/249 (6%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +D  + + ++G V  +R HG  +F +++D     Q+     +A  E A     +WV   D
Sbjct: 65  ADEDAILSVAGRVMTLRKHGKAMFANLQDETDTMQLYFQL-NAMGEEAYDFAKKWVDNGD 123

Query: 75  --GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFL 131
             G+V       I      G++ +  ++  +LS V   LP    G ++    +R++ R+L
Sbjct: 124 FVGVV------GIPFRTRRGELTILVKESTLLSKVLRPLPEKWHGLKDT--EVRYRQRYL 175

Query: 132 DLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQG 189
           DL  +T +     KR+ II SMR  +I    +E  TPIL+  +    AR F         
Sbjct: 176 DLMVNTDVRDTFRKRSDIIASMRKTLIDHGTLEVETPILSFLAGGANARPFQTYHNALDA 235

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           + Y L  A + Y + L+   F R F+I   FR+E   +   P EF  +++  ++ +  D+
Sbjct: 236 NMY-LRIATELYLKRLVVGMFGRVFEIGKNFRNEGIDTMHNP-EFTLMEVYWAYADYSDM 293

Query: 250 LNTMENVLR 258
           ++  E ++R
Sbjct: 294 MDLTEELVR 302



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A +CG+PP GG+  GIDR+VM L  ++++R+V LFP
Sbjct: 465 AIECGLPPTGGLGIGIDRLVMFLTDSRSIRDVILFP 500


>gi|160889278|ref|ZP_02070281.1| hypothetical protein BACUNI_01700 [Bacteroides uniformis ATCC 8492]
 gi|156861285|gb|EDO54716.1| hypothetical protein BACUNI_01700 [Bacteroides uniformis ATCC 8492]
          Length = 576

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 122/269 (45%), Gaps = 23/269 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV    D  C +  K + +     +  L    
Sbjct: 55  VSVAGRIMSRRIMGKASFIELQDSKGRIQVYITRDDICPDEDKEMYNTVFKRLLDLGDFI 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             E        G+I + A+K+ +L+ + + PLP+        +   E PE +R++ R++D
Sbjct: 115 GIEGFVFRTQMGEISIHAKKLTVLAKSIK-PLPIVKYKDGVAYDSFEDPE-LRYRQRYVD 172

Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQG 189
           L   D + +  +KR  +I +MR  +    + E  TPIL  S P G  AR F+        
Sbjct: 173 LIVNDGVKEKFLKRATVIKTMRAVLDEAGYTEVETPIL-QSIPGGASARPFITHHNSLDM 231

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ + + + + +
Sbjct: 232 DLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-EFTCMELYVQYKDYNWM 289

Query: 250 LNTMENVLR-------GVFEEFSNGNTVS 271
           ++  E +L        G  E   +G T+S
Sbjct: 290 MSFTEKLLERICIAVNGCTETEIDGKTIS 318



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A Q GMPP  GI  GIDR+ ML+ G   ++EV  FP
Sbjct: 460 KALQYGMPPTSGIGIGIDRLTMLMTGESFIQEVLFFP 496


>gi|291526765|emb|CBK92351.1| Lysyl-tRNA synthetase (class II) [Eubacterium rectale M104/1]
          Length = 537

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 106/214 (49%), Gaps = 26/214 (12%)

Query: 91  TGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRI 148
           TG+I + A++I +LS + + LP    G  +     R++ R++DL  +   K + +KR++I
Sbjct: 165 TGEISIHAEEITLLSKSLQILPEKFHGLTD--TDTRYRQRYVDLIMNQESKEVFIKRSQI 222

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ------APQQYK 202
           +  +R  +   +F+E  TP+L +++   A      +R  +  + AL +      + + Y 
Sbjct: 223 LKEIRNFLAGRDFMEVETPMLVSNAGGAA------ARPFETHYNALNEDVKLRISLELYL 276

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++   E++ R + E
Sbjct: 277 KRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMELTESMFRYLAE 335

Query: 263 EFSNGNTVSNN---------FLRICYDDAIRRYG 287
           +      +S N         F R+   DAI++Y 
Sbjct: 336 KVCGSTKISYNGVEIDLGKPFARMTMIDAIKKYA 369



 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 29/41 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+VMLL  ++ +R+V LFP  ++ 
Sbjct: 495 ALEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLFPTMKSL 535


>gi|118399585|ref|XP_001032117.1| lysyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|89286455|gb|EAR84454.1| lysyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 659

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 115/248 (46%), Gaps = 11/248 (4%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           + + V +   +   R  G  +IF  ++      QV+AN  S   +   S      L   G
Sbjct: 188 IDTIVTIGARITSFRASGKALIFYQVQQEGKKLQVLAN-KSVYTDAEYSFEEINSLFKRG 246

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-R 134
            ++  + +   +   TG++ ++  K+++LS    + LP           R++ R+LDL  
Sbjct: 247 DIIGITGKPTRSK--TGELSIAPTKLQLLSPCLHM-LPSLHTGLKDMETRYRKRYLDLIM 303

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFY 192
            ++   N + RT+II+ +R  +   NF+E  TP +        AR F+   + +N   F 
Sbjct: 304 NNSSRNNFITRTKIISYIRRYLDDRNFLEVETPQMNMIPGGAAARPFVTHHNDLNMDIFM 363

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y + L+  GF+R ++I   FR+E       P EF  +++  ++ + +D++  
Sbjct: 364 RI--APELYLKNLVVGGFERVYEIGKQFRNEGIDRTHNP-EFTSIELYQAYADYEDMMKL 420

Query: 253 MENVLRGV 260
            E++L  +
Sbjct: 421 TEDLLSSL 428


>gi|34763426|ref|ZP_00144374.1| Lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886895|gb|EAA24019.1| Lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 493

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 119/282 (42%), Gaps = 36/282 (12%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLCIDGLV 77
           + +G +  +R  G + F  I D  G  Q+    D    E    I K +    ++ ++G +
Sbjct: 57  KTAGRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNVGDIIGLEGEL 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDL--- 133
                E         ++ L  + I +L+     LP    G  +    IR++ R++DL   
Sbjct: 117 FITHTE---------ELTLRVKSIALLTKNVRSLPEKYHGLTDV--EIRYRKRYVDLIMN 165

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
              RDT     +KRT+II ++R  +    F+E  TPI+        A+ F+         
Sbjct: 166 PEVRDTF----IKRTKIIKAIRKYLDDRGFLEVETPIMHPILGGAAAKPFITHHNTLNID 221

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R + +   FR+E   +   P EF  +++  +  +  D++
Sbjct: 222 LY-LRIAPELYLKKLIVGGFERVYDLNRNFRNEGISTRHNP-EFTMVELYQAHADFHDMM 279

Query: 251 NTMENVLRGVFEEFSNGNTVS--------NNFLRICYDDAIR 284
           +  E ++  V +E +    +          NF R+   D I+
Sbjct: 280 DLCEGIISSVCKEVNGTTDIEYDGVKLSLKNFARVHMVDMIK 321



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL GA ++R+V LFP
Sbjct: 452 ALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVILFP 487


>gi|15606442|ref|NP_213822.1| lysyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6226183|sp|O67258|SYK_AQUAE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|2983651|gb|AAC07218.1| lysyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 597

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 12/246 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V L+G +  +R  G  IF  I+D  G  Q+    D    E  K         ID G ++ 
Sbjct: 154 VSLAGRLVSMRSMGKAIFGHIQDLTGKIQIYLKKDVIGEEKLKFFND----YIDVGDIVG 209

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
              +    N  TG++ +  ++ ++L+ +   PLP          +R++ R+LDL  +   
Sbjct: 210 VRGKLFRTN--TGELTVEVEEYQLLAKSLH-PLPEKWHGLKDVEVRYRQRYLDLIANPEA 266

Query: 140 KNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
           + I + RT++I  MR       FIE  TPIL   +S   AR F+      +   Y L  A
Sbjct: 267 RRIFMLRTKLITEMRKFFEMHGFIEVETPILQPIASGANARPFVTYHNFLETELY-LRIA 325

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF R ++I   FR+E       P EF  ++   ++ +  D++   E++ 
Sbjct: 326 PELYLKRLIVGGFPRVYEIGKNFRNESVDRTHNP-EFTMVEFYAAYWDYHDLIKFTEDMF 384

Query: 258 RGVFEE 263
             + E+
Sbjct: 385 VYLLEK 390



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNH----MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +++L+   +E+A+     +      E  L+      +  E   +      RA + GMPP 
Sbjct: 499 RFELIIARYEVANAYTELNDPFDQKERFLEQLKEKQMGDEEAMDMDEDFIRALEYGMPPT 558

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VM+L    ++REV LFP
Sbjct: 559 AGEGIGIDRLVMILANTDSIREVILFP 585


>gi|195584094|ref|XP_002081850.1| GD11238 [Drosophila simulans]
 gi|194193859|gb|EDX07435.1| GD11238 [Drosophila simulans]
          Length = 460

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 138/328 (42%), Gaps = 52/328 (15%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L  +  G  + + GW+  VR      FLDI D  G T       S+ F++      E   
Sbjct: 18  LKTNKPGDSLAIQGWIKNVRRLKNNTFLDIND--GST-------SSRFQVVVPRTPENQH 68

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGEREYPESIRFKY 128
              G V++   E   A    G  EL A ++E+L+   + E  P     ++  PE +R ++
Sbjct: 69  LAPGSVIAAVGEIQVAP--NGSFELHANQVEMLAEGRLQEGYPFSP-KQKHPPEYVR-EH 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R D +   +  R +   ++   M  ++F++ +TP+LT +  EGA +       +Q
Sbjct: 125 LHLRSRVDFVAAQMRVRHKAQKALHDYMDEQDFVQINTPLLTTNDCEGAGEVFRVQPDSQ 184

Query: 189 GSFYAL--PQAP--QQY---KQLL----------MASGFDRYFQIAPCFRDEDPRSDRLP 231
                +  P  P  Q Y   K  L          M  G  + + ++P FR E+ +S    
Sbjct: 185 DLLKQMNRPNIPIEQSYFDSKVFLSVSGQLHLEAMTYGLGKTYTLSPAFRAENSKSPLHL 244

Query: 232 GEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE----------EFSNGNTVSNNFLR---- 276
            EFY  + E++ +E+ + +   +E +L+ V             F   N+ SN+ L     
Sbjct: 245 AEFYMFEAELAHLEELEKLARFIEQMLKSVTSRLLETSGEDLSFCQRNSNSNSDLPWLQV 304

Query: 277 ----ICYDDAIRRYGTDKPDLRNPIIMH 300
               + YD+A++    +K  L+ PI ++
Sbjct: 305 PWKIMSYDEALQVLQENKDSLKTPISLN 332


>gi|115752517|ref|XP_784585.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115955526|ref|XP_001181152.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 431

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 100/249 (40%), Gaps = 24/249 (9%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
            W+  +R H G+ FLD+ D       QVV  P +          SE+     G  +    
Sbjct: 1   AWIRGLRQHKGVTFLDVNDGSCAQDLQVVVKPQTV------HNNSEFTF---GGAIEVKG 51

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
           + + +      IEL A  I +    E    P   +  +P  +++  ++  LR  T     
Sbjct: 52  QIVKSQSKGQPIELLASSIHVTGACEAEAYPFKAKVRHP--LKYTRQYPHLRSRTPINGA 109

Query: 143 VKRTRIINSMRCRMI--AENFIECSTPILTASSPEGARDF--LVPSRVNQGS---FYALP 195
           + R R   ++        E ++   TP+LT+S  EG  +   + PS   +     F+  P
Sbjct: 110 LMRVRSSATLAVHNFFQDEGYVNVHTPVLTSSDCEGGGNLFRVQPSDDEKDDDDHFFGTP 169

Query: 196 ---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILN 251
                  Q +   +A    + +   P FR E+ R+ R   EFY ++ E++F +   D+  
Sbjct: 170 VYLLVSGQLQLETIACSHTKAYTFGPTFRAENSRTRRHLAEFYMVEGEIAFTKSLQDVTE 229

Query: 252 TMENVLRGV 260
            ME  ++ V
Sbjct: 230 VMEQFVKSV 238



 Score = 37.4 bits (85), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 5/82 (6%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G +R    +V+ +   + G+     ++ +       + G  PHGG   G +R++  
Sbjct: 355 ELIGGSLREERLDVLQRRIQHSGL-----QDDYQWYLELRRFGTVPHGGFGLGFERLLQF 409

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           LLG  ++R+V  FP     C L
Sbjct: 410 LLGVDHIRDVIPFPRFPGSCLL 431


>gi|42518374|ref|NP_964304.1| lysyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|41582659|gb|AAS08270.1| lysyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 513

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 147/358 (41%), Gaps = 47/358 (13%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGL 76
             +++G +   R  G + F D+ D  G  Q+    D      ++I K       L IDG 
Sbjct: 60  MTKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIDGE 119

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRR 135
           VM            TG++ + A  I  LS A   LP    G ++  +  R +Y  L    
Sbjct: 120 VMKTD---------TGELTIRATHITFLSKALRPLPNKWDGLKDVEQIYRQRYLDLITNH 170

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
           D+  +  V RT+II ++R  +   +F+E  TP+L  + P G  AR F+          Y 
Sbjct: 171 DSYMR-FVHRTQIIQAIRDYLNNRDFLEVETPVL-HNIPGGAEARPFITHHNALDIDLYM 228

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                   K+L++  G +R ++I   FR+E   +   P EF +L+   ++ +  D+++  
Sbjct: 229 RIALELPLKRLIVG-GMERVYEIGRVFRNEGLDTKHNP-EFTELETYAAYWDFHDVMDEA 286

Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIR-RYGTD--KP----DLRNPI 297
           E ++R   +  S    ++           F R+   D I+ + G D  KP    + R   
Sbjct: 287 EGIIRAAAKVVSPDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVDFWKPMTIEEARKVA 346

Query: 298 IMHNV-------TEHFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGNRAFCDR 343
             HNV         H +++ F  F +   V P    G+ V   P AK    +  F DR
Sbjct: 347 DEHNVHYESYWKVGHIINAFFEEFGEGSIVQPTFVYGHPVEVSPLAKKNADDPRFTDR 404



 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 454 RAMEFGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 490


>gi|317479626|ref|ZP_07938751.1| lysyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|316904191|gb|EFV26020.1| lysyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 581

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 122/269 (45%), Gaps = 23/269 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV    D  C +  K + +     +  L    
Sbjct: 60  VSVAGRIMSRRIMGKASFIELQDSKGRIQVYITRDDICPDEDKEMYNTVFKRLLDLGDFI 119

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             E        G+I + A+K+ +L+ + + PLP+        +   E PE +R++ R++D
Sbjct: 120 GIEGFVFRTQMGEISIHAKKLTVLAKSIK-PLPIVKYKDGVAYDSFEDPE-LRYRQRYVD 177

Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQG 189
           L   D + +  +KR  +I +MR  +    + E  TPIL  S P G  AR F+        
Sbjct: 178 LIVNDGVKEKFLKRATVIKTMRAVLDEAGYTEVETPIL-QSIPGGASARPFITHHNSLDM 236

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ + + + + +
Sbjct: 237 DLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-EFTCMELYVQYKDYNWM 294

Query: 250 LNTMENVLR-------GVFEEFSNGNTVS 271
           ++  E +L        G  E   +G T+S
Sbjct: 295 MSFTEKLLERICIAVNGCTETEIDGKTIS 323



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A Q GMPP  GI  GIDR+ ML+ G   ++EV  FP
Sbjct: 465 KALQYGMPPTSGIGIGIDRLTMLMTGESFIQEVLFFP 501


>gi|295702317|ref|YP_003595392.1| lysyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294799976|gb|ADF37042.1| lysyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 494

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 129/285 (45%), Gaps = 29/285 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77
           V L+G +   R  G   F  ++D  G  Q+    D+     +EI  SV    ++ ++G++
Sbjct: 60  VSLAGRIMTKRGKGKAGFAHVQDLTGQIQLYVRKDAIGEEQYEIFSSVDIGDLVGVEGVL 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
                         G++ +  +   +L+ A   LP    G ++  +  R++ R+LDL  +
Sbjct: 120 FKTKV---------GELSIKVKDFTLLTKALRPLPDKYHGLKDIEQ--RYRQRYLDLITN 168

Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
              K   + R+RII SMR  +    ++E  TP++ + +    AR F+          Y +
Sbjct: 169 PESKQTFISRSRIIQSMRRYLDNHGYLEVETPMMHSIAGGAAARPFVTHHNALDMELY-M 227

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI+   E
Sbjct: 228 RIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDIMALTE 286

Query: 255 NVLRGVFEE------FSNGNT---VSNNFLRICYDDAIRRY-GTD 289
           N++  + +E         GN    ++  + R+   DAI++Y G D
Sbjct: 287 NLIAHIAQEVLGTTKIQYGNQEVDLTPEWTRLHMVDAIKQYTGVD 331



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 454 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFP 489


>gi|71894437|ref|YP_278545.1| asparaginyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|71851225|gb|AAZ43834.1| asparaginyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 447

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 114/262 (43%), Gaps = 14/262 (5%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           S + +SGWV   R +  + F++I D   I  +        F++ ++++      I G ++
Sbjct: 16  SELTISGWVSYFRGNEKVCFVEINDGSTIKNLQVVFKGFDFKLLENLKPGSAAVIKGKIL 75

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               ++        ++E+ A ++     A+E   P+  +    E++R +   L  R   L
Sbjct: 76  HTPGKS-------QEVEMQALELVDYKKADE-DYPIQNKEIKLETLR-EIPHLRHRTKVL 126

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY-----A 193
              ++ R+ +   +    I +NF   ++PI+T++  EGA +           F+     A
Sbjct: 127 RAVMLIRSTLAQEIHKYFIDKNFYYMNSPIITSNDGEGAGETFEVYGSEIKHFFGKNNKA 186

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                 Q      A GF + +  AP FR E+  + +   EF+ ++ E++F    D++N  
Sbjct: 187 TLGVTGQLHGESYAVGFKKIYTFAPTFRAENSNTKKHLAEFWMVEPEVAFANLYDMINLA 246

Query: 254 ENVLRGVFEEFSNGNTVSNNFL 275
           +++L+ V E+    N     FL
Sbjct: 247 QDLLKNVLEKTLEKNKFEFEFL 268


>gi|145222020|ref|YP_001132698.1| lysyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315446240|ref|YP_004079119.1| lysyl-tRNA synthetase (class II) [Mycobacterium sp. Spyr1]
 gi|254782477|sp|A4T5M9|SYK_MYCGI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|145214506|gb|ABP43910.1| lysyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315264543|gb|ADU01285.1| lysyl-tRNA synthetase (class II) [Mycobacterium sp. Spyr1]
          Length = 501

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 22/271 (8%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPD 55
           RTH+  +L          +  G  V ++G V   R  G + F  +++  G   QV+ +  
Sbjct: 38  RTHTLAELRQAYPDLEPDTKTGLKVGVAGRVIFARNSGKLCFATLQEGDGAQLQVMIS-- 95

Query: 56  SACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
               E+ +     W   +D G ++    E I++    G++ + A   +I+S A   PLPV
Sbjct: 96  --FAEVGQESLDAWKADVDLGDIVFVHGEVISSR--RGELSVLADSWQIVSKALR-PLPV 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
              +E  E  R + R++DL      + I + R  ++ ++R  +    F+E  TP+L T +
Sbjct: 151 -AHKELNEETRVRQRYVDLIVRPEARTIARQRIAVVRAVRSALERRGFLEVETPMLQTLA 209

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+  S       Y L  AP+ + +  +  GFDR F++   FR+E   S   P 
Sbjct: 210 GGAAARPFVTHSNALDADLY-LRIAPELFLKRCVVGGFDRVFELNRNFRNEGADSTHSP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           EF  L+   ++   DD       +++ V +E
Sbjct: 268 EFAMLETYQAYGTYDDSATVTRELIQEVADE 298



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 20/115 (17%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG-------IRNHMSEVMLQAFS 509
            P T P   +E +           ++DL    FE+A+G        I+    E   +A +
Sbjct: 394 TPLTRPHRSIEGVTE---------KWDLYVRKFELATGYSELIDPIIQRERFEAQARAAA 444

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                   ++  F     A + GMPP  G   GIDR++M L G  ++RE  LFP+
Sbjct: 445 AGDDEAMALDEDF---LAALEYGMPPTTGTGMGIDRLLMALTGL-SIRETVLFPI 495


>gi|119776009|ref|YP_928749.1| lysyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166229824|sp|A1S9M3|SYK_SHEAM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|119768509|gb|ABM01080.1| lysyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 500

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIIN 150
           G + ++ ++ E+L+ A   PLP        +  R++ R++DL  +   +   K R++++ 
Sbjct: 123 GDLYVNMERYELLTKALR-PLPEKFHGLTDQETRYRQRYVDLIVNEDSREAFKMRSKVVA 181

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI + F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 182 AIRNFMIKKEFMEVETPMMHVI-PGGASARPFVTHHNALDIEMY-LRIAPELYLKRLVVG 239

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GF+R F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  + +E     
Sbjct: 240 GFERVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLIDLTEEMLSSIAKELLGDT 298

Query: 269 TV---------SNNFLRICYDDAIRRYGTD 289
            +            + R+   +AI+ Y  D
Sbjct: 299 KLPYGEHVIDFGGPYTRMSMLEAIKHYNPD 328



 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 7/97 (7%)

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLY 526
           GND ++ +   ++    G E+A+G    + +E     F     +K+  ++          
Sbjct: 401 GNDFITDR---FEFFIGGREVANGFSELNDAEDQDNRFKAQVEAKDAGDDEAMFYDADFI 457

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 458 TALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|229019778|ref|ZP_04176581.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229026005|ref|ZP_04182389.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735286|gb|EEL85897.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228741503|gb|EEL91700.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 463

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/323 (22%), Positives = 128/323 (39%), Gaps = 61/323 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V  ++G V
Sbjct: 21  VQVSGWIRNLRDSKAFGFIELNDGSFFKGVQIVFDTELENFKEIAKLPLSSSV-KVEGTV 79

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           ++               E+ A+KI+I  +++    P+  +R   E +R       LR  T
Sbjct: 80  IATPG-------AKQPFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHLRPRT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              +   R R + +       +   F+   TPI+T S  EGA +     RV       +P
Sbjct: 129 NAFSATFRVRSVAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDLNNVP 185

Query: 196 QAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           +                       Q      A  F   +   P FR E+  + R   EF+
Sbjct: 186 KGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFW 245

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNF 274
            ++ E++F E  D+++  E++L+   +          EF N            N ++++F
Sbjct: 246 MVEPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDF 305

Query: 275 LRICYDDAIRRYGTDKPDLRNPI 297
            RI Y +AI+       D + P+
Sbjct: 306 GRITYTEAIKVLQESGADFKYPV 328


>gi|30688944|ref|NP_849558.1| aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase,
           putative [Arabidopsis thaliana]
 gi|30688949|ref|NP_194847.3| aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase,
           putative [Arabidopsis thaliana]
 gi|7270020|emb|CAB79836.1| aspartate--tRNA ligase-like protein [Arabidopsis thaliana]
 gi|222424631|dbj|BAH20270.1| AT4G31180 [Arabidopsis thaliana]
 gi|332660472|gb|AEE85872.1| aspartyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332660473|gb|AEE85873.1| aspartyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 558

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 106/255 (41%), Gaps = 26/255 (10%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            DL    + S V + G VH  RP    + F+ +R+     Q V +        A  V+  
Sbjct: 99  SDLVEEMLESEVLIRGRVHTNRPTSNKLGFVVLRESGSTVQCVVSQSEKTKVGANMVKYL 158

Query: 69  WVLCIDGLVMSRSAETINANIITG---QIELSAQKIEILSVA-EELPLPV----FGEREY 120
             L  +  V      T+    +TG   Q+E+  +K+  ++ +  +LPL V      E + 
Sbjct: 159 KQLSRESFVDVIGVVTLPKEPLTGTTQQVEIQVRKVYCINKSLAKLPLSVEDAARSEADI 218

Query: 121 PESI-------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
             S+             R  YR LDLR          +  +  + R ++  +NF+   TP
Sbjct: 219 EASLQTPSPAARVNQDTRLNYRVLDLRTPANQAIFQLQYEVEYAFREKLRFKNFVGIHTP 278

Query: 168 ILTASSPEGARDFLVPSRVN-QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
            L A S EG        R+  +G    L Q+PQ +KQ+ +     R F++ P FR ED  
Sbjct: 279 KLMAGSSEGGSAVF---RLEYKGQPACLAQSPQLHKQMAICGDLRRVFEVGPVFRAEDSF 335

Query: 227 SDRLPGEFYQLDMEM 241
           + R   EF  LD+EM
Sbjct: 336 THRHLCEFVGLDVEM 350



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H+ EV+ Q     GI  + +         +F+ G P HGG   
Sbjct: 473 FDVFIRGEEIISGAQRVHIPEVLEQRAGECGIDVKTISTYID----SFRYGAPLHGGFGV 528

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML     N+R+ SLFP
Sbjct: 529 GLERVVMLFCALNNIRKTSLFP 550


>gi|229083395|ref|ZP_04215745.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228699931|gb|EEL52566.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 499

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 130/296 (43%), Gaps = 38/296 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  ++D +G  Q+    D+     +E+ K+     ++ I+G V
Sbjct: 63  VSIAGRIMTKRGKGKAGFAHVQDLHGQVQIYVRKDAVGDEQYELFKTADLGDLVGIEGKV 122

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--- 133
              +          G++ + A    +L+ A   LP    G ++  +  R++ R+LDL   
Sbjct: 123 FKTNV---------GELSVKATGFTLLTKALRPLPDKYHGLKDVEQ--RYRQRYLDLITS 171

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
              R+T     V R++II  MR  +    ++E  TP++ A +    AR F+         
Sbjct: 172 MESRETF----VTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHHNALDME 227

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI+
Sbjct: 228 LY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDIM 285

Query: 251 NTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
              EN++  + ++     T+            + R+   DAI++Y     D  NP+
Sbjct: 286 KLTENMIAHIAKQVLGTTTIQYGEQEINLEPEWTRLHMVDAIKQYSG--ADFWNPM 339



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFP 492


>gi|326429846|gb|EGD75416.1| lysyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 498

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 15/157 (9%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
            ++ R++++ ++R  +++  F+E  TPIL  S P GA  R F   S       YAL  AP
Sbjct: 174 TLLVRSQVLQALRSFLVSRGFVEVETPIL-GSQPGGASARPFWTKSNALDRD-YALRVAP 231

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  G  R F+I   FR+E       P EF   ++  ++   +++ +  E++LR
Sbjct: 232 ELYLKKLVVGGLPRVFEIGKVFRNEGIDRTHNP-EFTSCELYQAYAPFEELFDLTEHLLR 290

Query: 259 GVFEEFSNGNTVSN----------NFLRICYDDAIRR 285
            V +  + G+ V N           F R+ + D I +
Sbjct: 291 HVVQAVTGGSLVLNVHGTPVDLSAPFQRLAFVDTIEK 327



 Score = 44.3 bits (103), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 25/39 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           RA + G+PP  G   GIDR++MLL    N+R+V  FPM 
Sbjct: 459 RALEYGLPPTVGWGMGIDRLIMLLTDTGNIRDVIAFPMK 497


>gi|311070729|ref|YP_003975652.1| lysyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310871246|gb|ADP34721.1| lysyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 499

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 21/258 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  ++D  G  Q+    DS     +EI K+     ++ + G V
Sbjct: 65  VTIAGRMMTKRGKGKAGFAHLQDLEGQIQIYVRKDSVGDEQYEIFKTSDLGDLIGVTGKV 124

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
              +          G++ + A   E+L+ A   LP    G ++  +  R++ R+LDL  +
Sbjct: 125 FKTNV---------GELSVKATSFELLTKALRPLPDKYHGLKDVEQ--RYRQRYLDLIVN 173

Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
              KN  + R++II +MR  +    ++E  TP +  S P GA  R F+          Y 
Sbjct: 174 PDSKNTFIARSKIIQAMRRYLDDHGYLEVETPTM-HSIPGGASARPFITHHNALDMPLY- 231

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++  
Sbjct: 232 MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYQDIMSLT 290

Query: 254 ENVLRGVFEEFSNGNTVS 271
           EN++  + +E     T+ 
Sbjct: 291 ENLIAHIAQEVLGSTTIQ 308



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 459 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFP 494


>gi|257871360|ref|ZP_05651013.1| lysyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257805524|gb|EEV34346.1| lysyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 497

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/304 (22%), Positives = 135/304 (44%), Gaps = 34/304 (11%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L           ++++     ++G +   R  G   F  ++D  G  Q+    
Sbjct: 39  RTHNSAELHELFDQRTKEELTEMNLSASVAGRMVTKRGKGKAGFAHLQDRDGQIQIYVRK 98

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP 113
           D    E  +  +   +    G     S E +  +  TG++ + A++I ILS A   LP  
Sbjct: 99  DQVGDEPYEGFKHADL----GDFFGVSGEIMKTD--TGEVTIKAKEIVILSKALRPLPDK 152

Query: 114 VFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-T 170
             G     +  R++ R+LDL   +D+  +  +KR++II+ +R  +    +IE  TP+L  
Sbjct: 153 YHGLTNIEQ--RYRQRYLDLISNKDSFDR-FMKRSQIISEIRRYLDGHGYIEVETPVLHN 209

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +    AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   
Sbjct: 210 QAGGAAARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHN 268

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDD 281
           P EF  L+   ++ +  D+++  E ++R   E+  +   ++         ++F R+   D
Sbjct: 269 P-EFTMLEAYTAYTDFKDVMDLTEGIIRNAAEKVLDSAVITYDGQEVDLASDFARVHMVD 327

Query: 282 AIRR 285
           AI++
Sbjct: 328 AIKQ 331



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP
Sbjct: 459 ALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 494


>gi|74214101|dbj|BAE29462.1| unnamed protein product [Mus musculus]
 gi|74219569|dbj|BAE29555.1| unnamed protein product [Mus musculus]
          Length = 438

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 14/246 (5%)

Query: 30  VRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMSRSAETINAN 88
           +R  G + F  ++D  G TQV A    A  E+ K     W   +D G  +S     I++ 
Sbjct: 1   MRNTGKLCFATLQDGDG-TQVQAMLSLA--EVGKERLDAWKSDVDLGDFISVRGRVISSR 57

Query: 89  IITGQIELSAQKIEILSVAEEL-PLPV-FGEREYPESIRFKYRFLDLRRDTLHKNIVKRT 146
               + ELS    E    A+ L PLPV F +      +R +Y  L +R D   KN + R 
Sbjct: 58  ----RGELSIMVSEWTMAAKSLRPLPVSFADMAEDTRVRQRYNDLIIREDA-RKNAMIRV 112

Query: 147 RIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
           +++ ++R  + +++F+E  TP+L T      AR F+  S       Y L  AP+ Y +  
Sbjct: 113 KVMRALRNYLESQDFVEIETPMLQTLHGGAAARPFITHSNALDIDLY-LRIAPELYLKRA 171

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           +  G DR F+I   FR+E       P EF  L+   ++ + +D        ++ V  +  
Sbjct: 172 VVGGIDRVFEINRNFRNEGVDRSHSP-EFAMLETYAAWGDYNDCARMTRESIQAVARDVF 230

Query: 266 NGNTVS 271
              TV+
Sbjct: 231 GSTTVT 236



 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        I+    E   +  +       V++  F     A + GM
Sbjct: 346 KWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMVLDEDF---LAAMEQGM 402

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   G+DR++M L G   +RE  LFP+
Sbjct: 403 PPTAGTGMGMDRLLMALTGL-GIRETVLFPL 432


>gi|239618393|ref|YP_002941715.1| lysyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239507224|gb|ACR80711.1| lysyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 504

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 133/310 (42%), Gaps = 31/310 (10%)

Query: 2   HRYRTHSCGDL---------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           H  +THS  D+           +   + + ++G V  +R HG   F  ++D  G  Q   
Sbjct: 27  HFEKTHSTSDIRKEYDMLQPSETKEDTTISVAGRVMALRHHGKSSFFVLKDSDGRIQAYI 86

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELP 111
             DS   E  K  +    + I   V     +       TG++ +  +  ++LS A   +P
Sbjct: 87  RKDSVGDEAFKLFKK--YVSIGDFV---GVKGFPFKTHTGELSIFVKDFKLLSKAIRTMP 141

Query: 112 LPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL- 169
               G ++  + I ++ R++++   D   K    R  ++  +R  + A  FIE  TPIL 
Sbjct: 142 EKWHGIKD--KEIIYRQRYVEMIASDDAIKRFKIRFELLRRVREFLNARGFIEVETPILH 199

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
           + +    AR F+    V     Y L  A + Y +  +  GF++ ++I   FR+E      
Sbjct: 200 SVTGGASARPFVTHINVFDSDMY-LRIAEELYLKRYLVGGFEKIYEIGKNFRNEGMSYKH 258

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYD 280
            P EF  +++  ++ + +DI++  E+++  V E+ +    +         +  +LRI   
Sbjct: 259 HP-EFVMMELYQAYADYNDIMDLTEDLISTVVEQLTGSTKIVYQGKEIDFAKPWLRIKMA 317

Query: 281 DAIR-RYGTD 289
           D I+ + G D
Sbjct: 318 DFIKEKLGVD 327



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 8/90 (8%)

Query: 481 QYDLVCNGFEIASG------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           +++L+ NG E A+        I  +   +        G ++  + +R     RA + GMP
Sbjct: 396 RFELIINGMECANAFSELNDPIEQYRRFLHQAGLREAGDAEAQMMDR--DFIRALEYGMP 453

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  G DRI+M +  +  +R+V  FP+
Sbjct: 454 PTGGLGIGWDRILMFVTDSPTIRDVIPFPL 483


>gi|297621783|ref|YP_003709920.1| asparaginyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297377084|gb|ADI38914.1| asparaginyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 467

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 114/263 (43%), Gaps = 30/263 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCI 73
           +G  V + GWV  VR      F+++ D   ++  QV+A+P+   ++ +A+ + +   + I
Sbjct: 19  IGKEVTIKGWVRTVRNQKTFTFIEVNDGSTLSNFQVIADPEIPNYQKLAEQLTTGTSVSI 78

Query: 74  DGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           +G ++    +        GQ +E+ A+ I+I+   +    P+  +R   E +R     L 
Sbjct: 79  EGAIVESPGK--------GQAVEMQAKSIQIIGSCDVENYPLQKKRHSFEFLR-SIAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-------- 184
            R +TL      R+ +  +       + FI   TP++TAS  EGA +    S        
Sbjct: 130 PRTNTLGAVARVRSALAYATHKFFQEKGFIYVQTPVITASDCEGAGELFRVSTLDPEKAP 189

Query: 185 RVNQG------SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           R  QG       F+  P       QL   + A      +   P FR E+  + R   EF+
Sbjct: 190 RNEQGGIDYSKDFFERPAFLTVSGQLNGEIFALSHSDIYTFGPTFRAENSNTSRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLR 258
            ++ EM+F + D  ++  E  ++
Sbjct: 250 MVEPEMAFCDLDMDMDNAEAYVK 272


>gi|270005193|gb|EFA01641.1| hypothetical protein TcasGA2_TC007211 [Tribolium castaneum]
          Length = 470

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 54/286 (18%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L  S VG  + + GW+  +R     +F D+ D        +        + K  + E   
Sbjct: 31  LDKSGVGDVITVKGWIKSLRDQKEHVFFDVSDG-------STAKKLQILLPKKSKPE--- 80

Query: 72  CIDGLVMSRSAETINANIIT----GQIELSAQKIEILS---VAEELPLPVFGEREYP-ES 123
                 +S  A  + +  +T    GQ+EL+A  IE+     V+E  P      ++Y  E 
Sbjct: 81  -----DLSTGASVVVSGPLTLSPKGQLELTANSIEVCGKCVVSEGYPFA--PRKQYAAEY 133

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRC--RMIAENFIECSTPILTASSPEGARDF- 180
           IR   ++L  R  T     + R R   ++       +E F+   TP+LT++  EGA +  
Sbjct: 134 IR---QYLHFRPRTHKFGALLRLRNAATLAIYNHFNSEGFVNVHTPVLTSNDCEGAGEVF 190

Query: 181 -LVPSR------------------VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
            +VP                     NQ SF  +     Q     +A G  + +   P FR
Sbjct: 191 KVVPDNKKLIKSMAKESQAEDEVYFNQKSFLTVSG---QLHLEAVAHGLSKVYTFGPTFR 247

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
            E+ +S     EFY L+ E++FVE+ D ++  +E +++ V ++  N
Sbjct: 248 AENSKSRLHLSEFYMLEGEIAFVEKLDGLMTCIEQLIKQVTKKLVN 293


>gi|322792670|gb|EFZ16544.1| hypothetical protein SINV_10183 [Solenopsis invicta]
          Length = 584

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 113/247 (45%), Gaps = 22/247 (8%)

Query: 23  LSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP------DSACFEIAKSVRSEWVLCIDG 75
           ++G VH +R  G  +IF D+R      QV+AN       D    + AK  R + +  +  
Sbjct: 115 IAGRVHSIRGSGAKLIFYDLRGEGVKVQVMANARLYESEDKFVADTAKIKRGDIIGIVGK 174

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-R 134
              S+  E    +II   + L +  + +L      P   FG ++  +  RF+ R+LDL  
Sbjct: 175 PAKSKKGEF---SIIPRSVTLLSPCLHML------PHLYFGLKD--KETRFRQRYLDLIL 223

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYA 193
            D + +    R +II  MR  +    F+E  TP++   +    A+ F+          Y 
Sbjct: 224 NDKVRQIFHIRAKIIAYMRKFLDNMGFLEVETPMMNMIAGGAIAKPFVTHHNELNMDLY- 282

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++   
Sbjct: 283 MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYNDLMEIT 341

Query: 254 ENVLRGV 260
           E+++ G+
Sbjct: 342 ESMVSGM 348



 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV  FP
Sbjct: 523 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLFFP 558


>gi|331220633|ref|XP_003322992.1| asparaginyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309301982|gb|EFP78573.1| asparaginyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 576

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 109/245 (44%), Gaps = 21/245 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VRL GWVHR+R   G+IF+ +RD  G  Q V     A    A ++ +E  + + G V++ 
Sbjct: 151 VRLFGWVHRLRQQKGLIFVVLRDGTGFLQCVLTGKLAQTYDALTLTTESTIQLTGKVVA- 209

Query: 81  SAETINANIITGQIELSAQKIEI--LSVAEELPLPV------FGEREYPESIRFKYRFLD 132
                   +  G+      ++++   S+    P           E   P+++  + R L 
Sbjct: 210 --------LPEGKSAPEGHELQVDWWSIVGRAPGDAEAFSNQISEDSGPDTLADR-RHLV 260

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +T    +  R+ ++++ R      + +E + P +  +  EG           + ++ 
Sbjct: 261 IRGETASSVLKVRSALLDAFRKSYAKISMVEVTPPCMVQTQVEGGSTLFEFGYYGEKAY- 319

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  + S  D  F I   FR E  ++ R   E+  L+ E++F+  +D+L  
Sbjct: 320 -LTQSSQLYLETCLPSLGD-CFCIQESFRAEKSKTRRHLSEYTHLEGELAFLTFEDLLAH 377

Query: 253 MENVL 257
           +E ++
Sbjct: 378 IEELI 382



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 4/80 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    E +L A+   GI      + +       + G   HGG   G++R +  
Sbjct: 499 EIVGGSMRMTGYEELLAAYKGAGIPA----DPYYWYTDQRKYGTCEHGGYGLGVERFLAW 554

Query: 550 LLGAKNVREVSLFPMSQNFC 569
           LLG  +VRE SL+P     C
Sbjct: 555 LLGRPHVRECSLYPRYTARC 574


>gi|297539160|ref|YP_003674929.1| lysyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297258507|gb|ADI30352.1| lysyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 514

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 110/239 (46%), Gaps = 25/239 (10%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           TG++ +   +I +L+ +   PLP        + ++++ R++DL   +      V R++++
Sbjct: 142 TGELSIKVTEIRLLTKSLR-PLPEKFHGLQDQEVKYRQRYVDLITSEETRATFVARSKVV 200

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           +++R  MI   F+E  TP+L    P GA  + F+          Y +  AP+ Y + L+ 
Sbjct: 201 SAIRNFMIQNEFLEVETPMLH-PIPGGASAKPFITHHNALDMQMY-MRIAPELYLKRLVV 258

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR--------- 258
            GF+R F++   FR+E   S R   EF  ++   ++ +   +++  EN +R         
Sbjct: 259 GGFERVFEVNRNFRNEG-LSVRHNPEFTMMEFYAAYTDYQWLMDFTENCIRTAAIAARGT 317

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYG--------TDKPDLRNPIIMHNVTEHFVHS 309
            V E       +S  F R+    AI++Y          D+  LR  I+ H  T+ F H+
Sbjct: 318 AVLEYQGRELDLSKPFQRLTIVGAIQKYAPQYTLGQLNDEAFLRAEILKHG-TKPFDHA 375



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+G    + +E     F     +KE  ++          RA + GMPP 
Sbjct: 422 RFELFVTGREIANGFSELNDAEDQAARFHAQMKAKEAGDHEAMFYDADFIRALEYGMPPA 481

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VM++  + ++R+V LFP
Sbjct: 482 GGCGIGIDRLVMMITDSASIRDVILFP 508


>gi|288803206|ref|ZP_06408640.1| asparagine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288334247|gb|EFC72688.1| asparagine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 463

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 34/275 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  +D G  + + GWV   R    + F+ + D   I   QVV +P +   E  
Sbjct: 3   RTKIVDALACTDFGKDINVKGWVRSHRSSKAVDFIALNDGSTIKNIQVVVDPSTIDAEEL 62

Query: 63  KSVRSEWVLCIDG-LVMSRSAETINANIITGQI-ELSAQKIEILSVA-EELPLPVFGER- 118
           KS+ +   + + G LV S+ A         GQ  E+  ++IEI  +   + P+   G+  
Sbjct: 63  KSITTGACISVVGTLVESQGA---------GQTSEIQCKEIEIYGLCPSDYPMQKKGQSF 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           EY      KY  + LR +T       R  +  ++        F    TP++T S  EGA 
Sbjct: 114 EYMR----KYGHMRLRTNTFGAVFRIRHNMAIAIHQYFHEHGFYYFHTPLITGSDAEGAG 169

Query: 179 D-FLVPS----RVNQGS-------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDE 223
           + F V +    R+ +G        F+          QL   L A+     +   P FR E
Sbjct: 170 NMFQVTTLDLDRIAKGGEVDYSADFFGKRTNLTVSGQLEGELGATALGAIYTFGPTFRAE 229

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +  + R   EF+ ++ E++F++++++++  E+ ++
Sbjct: 230 NSNTPRHLAEFWMVEPEVAFIDKNELMDLEEDFIK 264



 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + +L    N G+ +EV    +       + G  PHGG   G +R+++ 
Sbjct: 386 EIIGGSVREENYDKLLAEIDNRGMKREV----YDWYLDTRKYGTCPHGGFGLGFERLILF 441

Query: 550 LLGAKNVREVSLF 562
           + G +N+R+V  F
Sbjct: 442 VTGMQNIRDVIPF 454


>gi|240279712|gb|EER43217.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 949

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H  +++ Q     GI+   +E    G    F+ G PPH G   
Sbjct: 508 FDIFVRGQEIVSGGQRIHDEKILEQRMKEAGINPLAMEEYLEG----FRWGAPPHAGAGI 563

Query: 542 GIDRIVMLLLGAKNVREVSLF 562
           G++R++ML+L   N+R  SLF
Sbjct: 564 GLERLLMLILKLGNIRLASLF 584



 Score = 46.2 bits (108), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 90/224 (40%), Gaps = 29/224 (12%)

Query: 17  VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--LCI 73
           +G  V     VH +R     ++F+  R      Q V         +  ++  +WV  + +
Sbjct: 161 IGQEVTFRARVHHIRNMSSKLVFVIFRQQVTTMQGVLAEKPG---VISTLMVQWVERIRV 217

Query: 74  DGLVMSRSAETINANIITG----QIELSAQKIEILSVAEELPLP---------------V 114
             +V  R   + +   +TG     +EL  Q++ ++ V  E P+P                
Sbjct: 218 GSIVKVRGVLSSSKVPVTGCTIHDVELDIQELHVV-VHREDPIPFSVYEAELLNKDAKNT 276

Query: 115 FGEREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            G R +  +  R   R LDLR DT       ++ I N  R  + A+ FIE  TP L +S+
Sbjct: 277 DGRRNHVLDRTRLSNRILDLRTDTSQSIFRIQSAISNLFRAALDAQGFIEIHTPKLQSSA 336

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
            E            + +F A  Q+PQ  KQ+ +A+  +R   I 
Sbjct: 337 TESGASVFEVKYFTREAFLA--QSPQLAKQIEIAADLERVSDIG 378


>gi|145297979|ref|YP_001140820.1| lysyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166229791|sp|A4SJK0|SYK_AERS4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|142850751|gb|ABO89072.1| lysyl tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 512

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 12/250 (4%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V+++G +   R  G   F  ++D  G  Q+    D            +W L   G 
Sbjct: 65  LGKQVKIAGRIMTRRIMGKASFATLQDMAGKIQIYVTRDDLPEGFYNEQFKKWDL---GD 121

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           ++         N  TG++ +    I +L+ A   PLP   +    +  R + R+LDL   
Sbjct: 122 IVGVEGTLFRTN--TGELSVHVSTIRLLTKALR-PLPEKHKGLTDQEARCRQRYLDLIAN 178

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           +   K  + RT+++  +R     + F+E  TP++    P GA  R F+          Y 
Sbjct: 179 EESRKTFMIRTKVVAGIRKFFNDKRFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY- 236

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R ++I   FR+E   S R   EF  ++  M++ +  D+++  
Sbjct: 237 LRIAPELYLKRLVVGGFERVYEINRNFRNEGI-SVRHNPEFTMIEFYMAYADYIDLMDLT 295

Query: 254 ENVLRGVFEE 263
           E +LR + ++
Sbjct: 296 EELLRTLAQD 305



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++    G E+A+G    + +E   + F +    KE  ++           A + G+PP 
Sbjct: 419 RFEFFIGGRELANGFSELNDAEDQAKRFQDQVNQKEAGDDEAMFYDADFVTALEHGLPPT 478

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML   +  +R+V LFP
Sbjct: 479 AGQGIGIDRLVMLFTNSHTIRDVILFP 505


>gi|91081349|ref|XP_970908.1| PREDICTED: similar to aspartyl-tRNA synthetase [Tribolium
           castaneum]
          Length = 456

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 54/286 (18%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L  S VG  + + GW+  +R     +F D+ D        +        + K  + E   
Sbjct: 17  LDKSGVGDVITVKGWIKSLRDQKEHVFFDVSDG-------STAKKLQILLPKKSKPE--- 66

Query: 72  CIDGLVMSRSAETINANIIT----GQIELSAQKIEILS---VAEELPLPVFGEREYP-ES 123
                 +S  A  + +  +T    GQ+EL+A  IE+     V+E  P      ++Y  E 
Sbjct: 67  -----DLSTGASVVVSGPLTLSPKGQLELTANSIEVCGKCVVSEGYPFA--PRKQYAAEY 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRC--RMIAENFIECSTPILTASSPEGARDF- 180
           IR   ++L  R  T     + R R   ++       +E F+   TP+LT++  EGA +  
Sbjct: 120 IR---QYLHFRPRTHKFGALLRLRNAATLAIYNHFNSEGFVNVHTPVLTSNDCEGAGEVF 176

Query: 181 -LVPSR------------------VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
            +VP                     NQ SF  +     Q     +A G  + +   P FR
Sbjct: 177 KVVPDNKKLIKSMAKESQAEDEVYFNQKSFLTVSG---QLHLEAVAHGLSKVYTFGPTFR 233

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
            E+ +S     EFY L+ E++FVE+ D ++  +E +++ V ++  N
Sbjct: 234 AENSKSRLHLSEFYMLEGEIAFVEKLDGLMTCIEQLIKQVTKKLVN 279


>gi|148231213|ref|NP_001086948.1| asparaginyl-tRNA synthetase [Xenopus laevis]
 gi|50414890|gb|AAH77811.1| Nars-prov protein [Xenopus laevis]
          Length = 559

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 106/250 (42%), Gaps = 26/250 (10%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++F+ +RD  G  Q V + D  C             C +GL
Sbjct: 136 GQRVKVFGWVHRLRRQGKNLMFIVLRDGTGYLQCVLS-DQLC------------QCYNGL 182

Query: 77  VMSRSAE-----TIN----ANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +      T+N         G  EL+    E++ +A           E    ++  
Sbjct: 183 VLSTESTVAVYGTLNLVPDGKQAPGGHELACDYWELVGLAPAGGADNLLNEESDVDVQLN 242

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K    R+ +I+  R       + E + P L  +  EG           
Sbjct: 243 NRHMMIRGENMSKIFKVRSTVIHCFRNHFFDRGYYEVTPPTLVQTQVEGGSTLFKLDYFG 302

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + ++  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  +
Sbjct: 303 EEAY--LTQSSQLYLETCIPALGDS-FCIAQSYRAEQSRTRRHLAEYTHIEAECPFMTFE 359

Query: 248 DILNTMENVL 257
           ++L  +E+++
Sbjct: 360 NLLERLEDLV 369


>gi|269469084|gb|EEZ80637.1| lysyl-tRNA synthetase, class II [uncultured SUP05 cluster
           bacterium]
          Length = 496

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 19/277 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D     Q+ A  D            +W +   G ++  
Sbjct: 59  VSVAGRMMLKRVMGKASFATLQDSSAKIQIFATRDELPEGFYNEQFKKWDI---GDIIGA 115

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N+  G++ +   +I++L+ +   PLP        + IR++ R++DL      +
Sbjct: 116 VGTLFKTNV--GELSIRISQIKLLTKSLR-PLPEKFHGLADQEIRYRQRYVDLIVSEDSR 172

Query: 141 NIVKR-TRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAP 198
           N+ KR ++I+  +R      +FIE  TP+L T      A+ F           Y L  AP
Sbjct: 173 NVFKRRSQIVAYIRNFFNESDFIEVETPMLQTIPGGATAKPFETHHNALDIGMY-LRIAP 231

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  G D+ F+I   FR+E   +   P EF  ++   ++    D+++  E + R
Sbjct: 232 ELYLKRLIVGGMDKVFEINRNFRNEGLSTRHNP-EFTMIEFYQAYATYHDLMDLTEQLFR 290

Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286
           G+  +    +++         S +F RI   D+I +Y
Sbjct: 291 GIAVDVCGNSSIHYQGDDFDFSKSFDRISVFDSILKY 327



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    + +E     F      K+  ++    +   Y RA + GMPP 
Sbjct: 403 RFELFIGGREIANGFSELNDAEDQATRFKAQVAEKDAGDDEAMHYDADYIRALEYGMPPT 462

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML   + ++R+V LFP
Sbjct: 463 AGEGIGIDRLVMLFTDSPSIRDVLLFP 489


>gi|256844836|ref|ZP_05550294.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|294785883|ref|ZP_06751171.1| lysine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|256718395|gb|EEU31950.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|294487597|gb|EFG34959.1| lysine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 493

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 119/282 (42%), Gaps = 36/282 (12%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLCIDGLV 77
           + +G +  +R  G + F  I D  G  Q+    D    E    I K +    ++ ++G +
Sbjct: 57  KTAGRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNVGDIIGLEGEL 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDL--- 133
                E         ++ L  + I +L+     LP    G  +    IR++ R++DL   
Sbjct: 117 FITHTE---------ELTLRVKSIALLTKNVRSLPEKYHGLTDV--EIRYRKRYVDLIMN 165

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
              RDT     +KRT+I+ ++R  +    F+E  TPI+        A+ F+         
Sbjct: 166 PEVRDTF----IKRTKIVKAIRKYLDDRGFLEVETPIMHPILGGAAAKPFITHHNTLNID 221

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R + +   FR+E   +   P EF  +++  +  +  D++
Sbjct: 222 LY-LRIAPELYLKKLIVGGFERVYDLNRNFRNEGISTRHNP-EFTMVELYQAHADFHDMM 279

Query: 251 NTMENVLRGVFEEFSNGNTVS--------NNFLRICYDDAIR 284
           +  E ++  V +E +    +          NF R+   D I+
Sbjct: 280 DLCEGIISSVCQEVNGTTDIEYDGVKLSLKNFARVHMVDMIK 321



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL GA ++R+V LFP
Sbjct: 452 ALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVILFP 487


>gi|311029015|ref|ZP_07707105.1| lysyl-tRNA synthetase [Bacillus sp. m3-13]
 gi|311032311|ref|ZP_07710401.1| lysyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 496

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 116/261 (44%), Gaps = 27/261 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77
           V L+G +   R  G   F  I+D  G  Q+    D+     +EI  S     ++ + G V
Sbjct: 62  VTLAGRIMTKRGKGKAGFAHIQDLTGQIQLYIRKDAVGDEAYEIFNSADIGDIVGVTGFV 121

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--- 133
                         G++ + A   E+L+ A   LP    G ++  +  R++ R+LDL   
Sbjct: 122 FKTKV---------GELSIKATSFELLTKALRPLPEKYHGLKDVEQ--RYRQRYLDLITN 170

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGS 190
              R+T     + R++II +MR  +    ++E  TP++ + +    AR F+        +
Sbjct: 171 PESRETF----IARSKIIQAMRRYLDDHGYLEVETPMMHSIAGGASARPFITHHNTLDMT 226

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI+
Sbjct: 227 LY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDIM 284

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
           +  EN++  + +E      V 
Sbjct: 285 SLTENLVAHIAKEVLGSTKVQ 305



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFP 491


>gi|119952903|ref|YP_945112.1| asparaginyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|119861674|gb|AAX17442.1| asparaginyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 461

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/310 (21%), Positives = 123/310 (39%), Gaps = 50/310 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA--KSVRSEWVLC 72
           + S + + GW+   R +G I F++I D   I   Q + N +   FE    K + +   + 
Sbjct: 14  LDSIITVKGWIRTKRSNGKISFVEINDGSNIKGIQAIINEEDHQFEKKELKKLTTGASIS 73

Query: 73  IDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
           + G+++   A+        GQ  E+      I+  A++    +  +R   E +R +   L
Sbjct: 74  LTGILILSPAK--------GQTYEIKTTNFNIIGEADQETYLLQKKRHTFEFLR-EIPHL 124

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---- 187
            +R +T       R +I   +        F+   TPI+T++  EGA +    S ++    
Sbjct: 125 RIRTNTFGAVARIRNQISYKIHEYFQKNGFLYIHTPIITSNDGEGAGEIFRVSTLDFNNI 184

Query: 188 --------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 185 TNGKEVDFKDDFFGKQAFLTVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 244

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSNNFL 275
           ++ EM+F   +D +N  EN L+ + +E  N                      + +++NF 
Sbjct: 245 IEPEMAFFTLEDNINLAENFLKYILKETLNNCNQDIEFFDNFIEKGLIKKIEDVINSNFE 304

Query: 276 RICYDDAIRR 285
            I Y  AI++
Sbjct: 305 VITYTQAIKQ 314


>gi|108757457|ref|YP_632893.1| lysyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108461337|gb|ABF86522.1| lysyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 517

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 21/273 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G V  +R  G   F+ +RD  G  QV    D+    +  S  + + LC  G  ++ + 
Sbjct: 78  VAGRVVAMRSFGKAAFIKLRDRSGEIQVHMKKDA----LGDSYET-FKLCDLGDFLAATG 132

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKN 141
               +   TG++ LSA K   L+ +   PLP          +R++ R+LDL  +  + + 
Sbjct: 133 PVFRSK--TGELTLSATKFTPLTKSLR-PLPEKWHGLTDVEVRYRQRYLDLVSNPDVKQT 189

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
            ++R ++I  +R  +   +F+E  TP++    S   AR F           Y +  AP+ 
Sbjct: 190 FLRRNKLIRFIRNFLDTRDFVEVETPMMHPLVSGAAARPFTTHHNALDIDLY-MRIAPEL 248

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  G +R +++   FR+E   +   P EF  L+   ++   +D+++  E ++   
Sbjct: 249 YLKRLVVGGLERVYEVNRNFRNEGISTRHNP-EFTMLEFYQAYATYEDLMDLSEEMISEA 307

Query: 261 FEEFSNGNTVS---------NNFLRICYDDAIR 284
            +  +    V            + RI   +AIR
Sbjct: 308 AKAVTGDTKVKYGDHVLDFGKGWKRISMTEAIR 340



 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+ ML   ++++R+V LFP+
Sbjct: 474 RALEHGMPPTAGEGIGIDRLAMLFTDSQSIRDVILFPL 511


>gi|33862174|ref|NP_893735.1| lysyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
 gi|39932077|sp|Q7UZP0|SYK_PROMP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33634392|emb|CAE20077.1| Lysyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
          Length = 512

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 15/248 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAKSVRS-----EWVLCID 74
           V ++G V   R  G I F  I D  G  Q+         FEI   + S     E V   D
Sbjct: 53  VAIAGRVLAKRVMGKIAFYTIADQEGKIQLYLEKKILDDFEIHAKLLSFEDLKEIVDIGD 112

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            + +  + +  N     G++ +   K E+LS + + PLP           R++ R+LDL 
Sbjct: 113 WIGVYGTIKKTNK----GELSIKVSKWEMLSKSLQ-PLPDKWHGLTDIEKRYRQRYLDLI 167

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            + L KN+ K R + I+ +R  +  +NF+E  TPIL + +    AR F+          Y
Sbjct: 168 VNPLSKNVFKTRAKCISLIRRWLDEKNFLEIETPILQSEAGGAEARPFITHHNTLDIPLY 227

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + + + ++  GF++ +++   FR+E   +   P EF  +++  +F    D++N 
Sbjct: 228 -LRIATELHLKRMVVGGFEKVYELGRIFRNEGISTKHNP-EFTSVEIYQAFSNYIDMMNL 285

Query: 253 MENVLRGV 260
            E+++R +
Sbjct: 286 TEDLIRDI 293



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A + GMPP GG+  GIDR++MLL  + ++R+V  FP+
Sbjct: 456 QALEIGMPPTGGLGIGIDRLIMLLTNSPSIRDVITFPL 493


>gi|149278398|ref|ZP_01884535.1| asparaginyl-tRNA synthetase [Pedobacter sp. BAL39]
 gi|149230768|gb|EDM36150.1| asparaginyl-tRNA synthetase [Pedobacter sp. BAL39]
          Length = 482

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 32/269 (11%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           L   +    VR+ GWV   R +    F+ I D    G  Q+V + +    E+ K + +  
Sbjct: 11  LETEEFNRAVRVMGWVRTFRNNQ---FIAINDGSCMGNIQIVVDFNQTPEELLKRITTGA 67

Query: 70  VLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            + + G ++         ++  GQ +++ A +IEIL  ++    P+  ++   E +R + 
Sbjct: 68  AIAVTGEIVE--------SVGKGQRVDIKATEIEILGDSDPEKFPLQPKKHSLEFLR-EI 118

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDF 180
             L  R +T +     R  +  ++        F+   TP++TAS  EGA         DF
Sbjct: 119 AHLRFRTNTFNAVFKIRHALAFAIHKFYNERGFVYMHTPVITASDAEGAGEMFKVTTLDF 178

Query: 181 LVPSRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLP 231
             P R + G       F+A         QL   L A  F + +   P FR E+  + R  
Sbjct: 179 DNPPRTDDGKVDFSEDFFARATNLTVSGQLEGELAAMAFGQIYTFGPTFRAENSNTTRHL 238

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            EF+ ++ E++F + +D +   E++++ V
Sbjct: 239 AEFWMIEPEIAFADLEDNMQLAEDMMKFV 267


>gi|67522913|ref|XP_659517.1| hypothetical protein AN1913.2 [Aspergillus nidulans FGSC A4]
 gi|40745922|gb|EAA65078.1| hypothetical protein AN1913.2 [Aspergillus nidulans FGSC A4]
 gi|259487270|tpe|CBF85812.1| TPA: lysyl-tRNA synthetase, hypothetical (Eurofung) [Aspergillus
           nidulans FGSC A4]
          Length = 606

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 125/260 (48%), Gaps = 9/260 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G     + VR++G ++  R  G  +IF DIR      QVV    +A   ++   + E + 
Sbjct: 119 GEQKPDTTVRIAGRIYTKRSSGAKLIFYDIRAEGVKVQVVCQAQNASGAVSFEDQHEHLR 178

Query: 72  CIDGL-VMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYR 129
             D + ++     +   N   G++ + A ++ +L+     +P   +G ++  +  R++ R
Sbjct: 179 RGDIVGIVGFPGRSNPKNRPDGELSIFATEVVLLAPCLHAIPSEHYGFQDKEQ--RYRQR 236

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +   +N+ + R++++  +R      +F+E  TP++ A +    A+ F+     +
Sbjct: 237 YLDLIMNDKSRNVFITRSKMVTYIRNFFDQRDFVEVETPMMNAIAGGATAKPFITHHNEH 296

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
             + + +  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  
Sbjct: 297 DMNLF-MRVAPELYLKMLIVGGLERVYELGRQFRNEGVDLTHNP-EFTTCEFYWAYADVY 354

Query: 248 DILNTMENVLRGVFEEFSNG 267
           D++N  E ++ G+ +  + G
Sbjct: 355 DVMNLTEELVSGLVKHITGG 374



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 25/40 (62%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + + G+PP GG   GIDR+VM L    +++EV  FP  ++
Sbjct: 540 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKD 579


>gi|313895695|ref|ZP_07829251.1| lysine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975821|gb|EFR41280.1| lysine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 503

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 20/250 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR++G +  +R HG   F  + D  G  Q+    D       K  + E+     G ++  
Sbjct: 67  VRIAGRLMAIRGHGKASFSTLNDRTGNIQIYFKQDVLG---EKKYKEEFKRLDIGDIIGI 123

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLR----- 134
                      G++ +  +  ++LS +   LP    G ++     R++ R+LDL      
Sbjct: 124 CGVVFKTR--RGEVTVRVEDFDLLSKSLRPLPEKFHGLKDV--DTRYRQRYLDLMVNYEV 179

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193
           RDT      KR +II S+R  +   +F+E  TP+L T +    AR F+          Y 
Sbjct: 180 RDTFR----KRAKIIRSIRSYLDERDFLEVETPVLSTIAGGAAARPFITHHNALDIDLY- 234

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  A +   + L+  G DR +++   FR+E       P EF  +++  +F +  D++   
Sbjct: 235 LRIATELSLKRLIVGGLDRVYEMGRIFRNEGMDVRHNP-EFTSIEIYQAFGDYRDLMEIT 293

Query: 254 ENVLRGVFEE 263
           E ++R   E+
Sbjct: 294 EGIVRRTAED 303



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 29/43 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + G+PP GG+  GIDR+VMLL  + ++R+V LFP  +   +
Sbjct: 461 ALEYGLPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPTMKPLAE 503


>gi|310822815|ref|YP_003955173.1| lysyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309395887|gb|ADO73346.1| Lysyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 516

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 119/273 (43%), Gaps = 21/273 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +  +R  G   F+ +RD  G  QV    D+    +  S  + + LC  G  +  + 
Sbjct: 76  VAGRIVAMRTFGKAAFIKLRDRSGEIQVHMKKDA----LGDSYEA-FKLCDLGDFLGATG 130

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKN 141
                   TG++ LSA K   L+ +   PLP          IR++ R+LDL  +  + + 
Sbjct: 131 PVFRTK--TGELSLSATKFTPLTKSLR-PLPEKWHGLTDVEIRYRQRYLDLVSNPEVKQT 187

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
            +KR +++  +R  + + ++IE  TP++    S   AR F           Y +  AP+ 
Sbjct: 188 FLKRNKLVRFIREFLDSRDYIEVETPMMHPLVSGAAARPFKTHHNALDIELY-MRIAPEL 246

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  G +R ++I   FR+E   +   P EF  L+   ++   +D+++  E ++   
Sbjct: 247 YLKRLVVGGIERVYEINRNFRNEGISTRHNP-EFTMLEFYQAYATYEDLMDLTEQMISEA 305

Query: 261 FEEFSNGNTV---------SNNFLRICYDDAIR 284
            +  +    V            + RI   +AIR
Sbjct: 306 AQAVTGATKVPYQGHELDFGKGWKRIPMTEAIR 338



 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+ ML   A ++R+V LFP+
Sbjct: 473 RALEHGMPPTAGEGIGIDRLTMLFTDAPSIRDVILFPL 510


>gi|294783903|ref|ZP_06749225.1| lysine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294479715|gb|EFG27494.1| lysine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 493

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 28/278 (10%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLCIDGLV 77
           + +G +  +R  G + F  I D  G  Q+    D    E    I K +    ++ ++G +
Sbjct: 57  KTAGRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEEFDHIVKMLNVGDIIGVEGEL 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                E         ++ L  + I +L+     LP    G  +    IR++ R++DL  +
Sbjct: 117 FITHTE---------ELTLRVKSISLLTKNVRSLPEKYHGLTDV--EIRYRKRYVDLIMN 165

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
             +    +KRT+II ++R  +    F+E  TP++        A+ F+          + L
Sbjct: 166 PDVRSTFIKRTQIIKAVRKYLDDRGFLEVETPLMHPILGGAAAKPFVTHHNALNLDLF-L 224

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+R +++   FR+E   +   P EF  +++  S    +D+++  E
Sbjct: 225 RIAPELYLKKLIVGGFERVYELGRNFRNEGISTRHNP-EFTMIELYQSHANFNDMMDLCE 283

Query: 255 NVLRGVFEEFSNGNTVS--------NNFLRICYDDAIR 284
            ++  V +E +    +          NF R+   D I+
Sbjct: 284 GIISSVCQEVNGTTDIEYDGVQLSLKNFQRVHMVDMIK 321



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL GA ++R+V LFP
Sbjct: 452 ALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILFP 487


>gi|195335103|ref|XP_002034215.1| GM21746 [Drosophila sechellia]
 gi|194126185|gb|EDW48228.1| GM21746 [Drosophila sechellia]
          Length = 460

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 138/328 (42%), Gaps = 52/328 (15%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L  +  G  + + GW+  VR      FLDI D  G T       S+ F++      E   
Sbjct: 18  LKTNKPGDSLAIQGWIKNVRRLKNNTFLDIND--GST-------SSRFQVVVPRTPENQH 68

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGEREYPESIRFKY 128
              G V++   E   A    G  EL A ++E+L+   + E  P     ++  PE +R ++
Sbjct: 69  LAPGSVIAAVGEIQVAP--NGSFELHANQVEMLAEGRLQEGYPFSP-KQKHPPEYVR-EH 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R D +   +  R +   ++   M  ++F++ +TP+LT +  EGA +       +Q
Sbjct: 125 LHLRSRVDFVAAQMRVRHKAQKAIHDYMDEQDFVQINTPLLTTNDCEGAGEVFRVQPDSQ 184

Query: 189 GSFYAL--PQAP--QQY---KQLL----------MASGFDRYFQIAPCFRDEDPRSDRLP 231
                +  P  P  Q Y   K  L          M  G  + + ++P FR E+ +S    
Sbjct: 185 DLLKQMNRPNVPMEQSYFDSKVFLSVSGQLHLEAMTYGLGKTYTLSPAFRAENSKSPLHL 244

Query: 232 GEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE----------EFSNGNTVSNNFLR---- 276
            EFY  + E++ +E+ + +   +E +L+ V             F   N+ SN+ L     
Sbjct: 245 AEFYMFEAELAHLEELEKLARFIEQMLKSVTSRLLETSGEDLSFCQRNSNSNSDLPWLQV 304

Query: 277 ----ICYDDAIRRYGTDKPDLRNPIIMH 300
               + YD+A++    +K  L+ PI ++
Sbjct: 305 PWKIMSYDEALQVLQENKGSLKTPISLN 332


>gi|183982461|ref|YP_001850752.1| lysyl-tRNA synthetase 2 LysX [Mycobacterium marinum M]
 gi|183175787|gb|ACC40897.1| lysyl-tRNA synthetase 2 LysX [Mycobacterium marinum M]
          Length = 1097

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 19/225 (8%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      +D  + V +SG + RVR +GG++F  +RD  G  QV+   D++  E  ++ 
Sbjct: 643 THTVAQAMDADDQASVSVSGRILRVRNYGGVLFAHLRDWSGEIQVLL--DNSRLEQGRAA 700

Query: 66  RSEWVLCIDGLV----MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                + +  LV       S++T   ++I  +  L  + +         PLP   +    
Sbjct: 701 DFNAAIDLGDLVEMTGQMGSSKTGTRSLIVRRWRLIGKCLR--------PLPNKWKGLTD 752

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
              R + R++DL  +   + ++  R+ ++ S+R  + A+ FIE  TPIL        AR 
Sbjct: 753 PEARVRTRYVDLAVNAESRALITARSAVLRSVRETLSAKGFIEVETPILQQVHGGATARP 812

Query: 180 FLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 813 FI--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 855



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 29/40 (72%), Gaps = 1/40 (2%)

Query: 527  RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +A +  MPP GG+  G+DR+VML+ G +++RE   FP+++
Sbjct: 1057 QAMEYAMPPTGGLGMGVDRVVMLITG-RSIRETLPFPLAK 1095


>gi|209550996|ref|YP_002282913.1| lysyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|259511531|sp|B5ZQW5|SYK_RHILW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|209536752|gb|ACI56687.1| lysyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 497

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 142/304 (46%), Gaps = 31/304 (10%)

Query: 2   HRYRTHSCGDLGV------SDVGS--FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +LG       SDV +   V ++G V+  R  G  +F+DI D  G  Q+ ++
Sbjct: 35  HFHRTLTNAELGAKYESLESDVETQDVVTVAGRVYSSRNSG--MFMDIHDASGKIQIFSH 92

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D+   E     R+   +   G ++  +   I      G++ ++AQKIE+L+ +  LP+P
Sbjct: 93  KDTTPEE----ARALLPMIDIGDIIGVTG--IVRRTKRGELTINAQKIEMLTKSL-LPMP 145

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA- 171
                     +R++ R LD+  +   K    +R++I++ +R  M  + F+E  TP+L + 
Sbjct: 146 EKWHGLSDIELRYRKRHLDIMTNEDSKLRFQQRSKIVSGIRRFMENDGFMEVETPMLQSI 205

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRL 230
                A  F       +   Y L  AP+ + +  + SG  D+ F+I   FR+E   +   
Sbjct: 206 YGGATAEPFKTHHNTLKLDMY-LRIAPELFLKRTLVSGLTDKVFEINRNFRNEGVSTRHN 264

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGV------FEEFSNGN---TVSNNFLRICYDD 281
           P EF  ++   ++ + +D+++ +E +   +        EF  G+   +    F R+   D
Sbjct: 265 P-EFTMMECYWAYADYEDMMDLVERLFETLALSIHGTTEFDFGDKQLSFKGPFKRVPMPD 323

Query: 282 AIRR 285
           A+++
Sbjct: 324 AVKQ 327



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 12/98 (12%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++  CN +E+ +           R  M E + QA +     K++ E        A   G
Sbjct: 404 RFETYCNAWELGNAFSELNDPEEQRRRMVEQLEQAHARGEKEKQLDEE----FLDAIDQG 459

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR++MLL  A ++R+V LFP  +N  D
Sbjct: 460 MPPAGGLGIGVDRLIMLLTNAPSIRDVILFPARRNKAD 497


>gi|306833932|ref|ZP_07467056.1| lysine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304423933|gb|EFM27075.1| lysine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 496

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 116/277 (41%), Gaps = 17/277 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + ++     ++G +   R  G + F  I+D  G  QV    D+     ++I K       
Sbjct: 56  LHEINKTATIAGRLMTKRGKGKVGFAHIQDRDGQIQVYVRKDAVGDENYQIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L I+G +M             G++ + A  +  LS A   PLP           +++ R+
Sbjct: 116 LGIEGEIMRTD---------MGELTIKATHLTHLSKALR-PLPEKFHGLTDVETKYRKRY 165

Query: 131 LDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           LDL   R++  +  V R++II+ +R  +    F+E  TP+L   +   A    +     Q
Sbjct: 166 LDLVSNRESFER-FVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAARPFITHHNAQ 224

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
                L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  D
Sbjct: 225 DMDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFKD 283

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           I++  E +++   +       +S     I  D   +R
Sbjct: 284 IMDLTEGIIQHASKAVKGDGPISYQGTEIAIDKPFKR 320



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|300175294|emb|CBK20605.2| unnamed protein product [Blastocystis hominis]
          Length = 393

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 13/200 (6%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR--IINS 151
           +ELSA    ++   +    P+  +   PE +R       +R  +  + +V R R  +I S
Sbjct: 5   LELSAASYHVIGDCDPSSYPLQKKFHTPEFLR---SIPHIRPRSNLQGVVNRMRNTMIQS 61

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLV-----PSRVNQGSFY---ALPQAPQQYKQ 203
           +   + + +FI+  TPI+T++  EGA +         ++++  +F+   A      Q + 
Sbjct: 62  VHHTLQSNDFIQVMTPIMTSNDCEGAGELFSVALASSNQIDLNAFFNSRAFLTVSGQLQA 121

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            +MA    R +  AP FR E+  + R   EF+ ++ EM FV+  D+++  + V+  V + 
Sbjct: 122 EMMAHAMTRVYSFAPTFRAENSNTSRHLCEFWMIEPEMCFVQLPDLMDLAKKVIMDVAKN 181

Query: 264 FSNGNTVSNNFLRICYDDAI 283
               +     FL    D  +
Sbjct: 182 LEGKHGEDFRFLESRVDKTV 201



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 457 NPFTMPQGG-MESLKGNDLLSIKAFQYDLVCNGF-------EIASGGIRNHMSEVMLQAF 508
            PF M   G  ++++  DLL  +     +VC G+       EI  G +R    +V+ +  
Sbjct: 271 KPFYMKDSGDGKTVEAMDLLVPR-----VVCFGWIRSDVQGEIVGGSMREDQYDVLKRRM 325

Query: 509 SNVGISKEVVENRFGGLYRAF-------QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
              G+  E VE+  G   +A        + G  PHGG   G++R++    G +N+R+V  
Sbjct: 326 EEKGLLSEEVES--GRSTKALDWYLDLRRYGSVPHGGWGLGLERLIETFTGVQNIRDVIP 383

Query: 562 FPMSQNFCDL 571
            P     C L
Sbjct: 384 VPRVPGSCLL 393


>gi|296439737|sp|B2HR11|LYSX_MYCMM RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
          Length = 1105

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 19/225 (8%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      +D  + V +SG + RVR +GG++F  +RD  G  QV+   D++  E  ++ 
Sbjct: 651 THTVAQAMDADDQASVSVSGRILRVRNYGGVLFAHLRDWSGEIQVLL--DNSRLEQGRAA 708

Query: 66  RSEWVLCIDGLV----MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                + +  LV       S++T   ++I  +  L  + +         PLP   +    
Sbjct: 709 DFNAAIDLGDLVEMTGQMGSSKTGTRSLIVRRWRLIGKCLR--------PLPNKWKGLTD 760

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
              R + R++DL  +   + ++  R+ ++ S+R  + A+ FIE  TPIL        AR 
Sbjct: 761 PEARVRTRYVDLAVNAESRALITARSAVLRSVRETLSAKGFIEVETPILQQVHGGATARP 820

Query: 180 FLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 821 FI--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 863



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 29/40 (72%), Gaps = 1/40 (2%)

Query: 527  RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +A +  MPP GG+  G+DR+VML+ G +++RE   FP+++
Sbjct: 1065 QAMEYAMPPTGGLGMGVDRVVMLITG-RSIRETLPFPLAK 1103


>gi|530448|emb|CAA83775.1| Asp-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
          27343]
          Length = 51

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/47 (48%), Positives = 35/47 (74%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
          RTH+CG+L + +V   V L GWV ++R  G ++F+D++D YGITQ+V
Sbjct: 3  RTHTCGELTLQNVDQKVILQGWVKKIRKLGAMVFIDLKDRYGITQLV 49


>gi|226499084|ref|NP_001146902.1| lysyl-tRNA synthetase [Zea mays]
 gi|195604954|gb|ACG24307.1| lysyl-tRNA synthetase [Zea mays]
          Length = 614

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 88/174 (50%), Gaps = 13/174 (7%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R+LD+  +   ++I K R+++++ +R  +    F+E  TP++   +    AR 
Sbjct: 262 QETRYRQRYLDIMVNHEVRHIFKTRSKVVSFIRKFLDDREFLEVETPMMNMIAGGAAARP 321

Query: 180 FLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           F+   + +N   F  +  AP+ Y + L+  G DR ++I   FR+E       P EF   +
Sbjct: 322 FITHHNELNMRLFMRI--APELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTTCE 378

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNG-------NTVSNNFLRICYDDAIRR 285
             M++ + +D++   E +L G+ +E + G       N V+N+ + I +    RR
Sbjct: 379 FYMAYADYNDLMELTETMLSGMVKELTGGYKIKYHANGVTNSPIEIDFTPPFRR 432



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ MLL  ++N++EV LFP
Sbjct: 573 ALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFP 608


>gi|315652679|ref|ZP_07905654.1| lysine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485057|gb|EFU75464.1| lysine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 496

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 123/288 (42%), Gaps = 36/288 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74
           G  V ++G +   R  G   F  ++D  G  Q     DS     ++  K +    ++ + 
Sbjct: 58  GKSVNIAGRLMSKRVMGKASFCHVQDLTGKIQAYVARDSVGEDEYKAFKKLDIGDIVGVT 117

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G V             TG+I + A  + +LS + + PLP           R++ R++DL 
Sbjct: 118 GTVFKTQ---------TGEISIHATDVVLLSKSLK-PLPEKFHGLTDTDTRYRQRYVDLI 167

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
             + +    VKR+RII  +R  +  + FIE  TP+L +++   A      +R     + A
Sbjct: 168 MNEDVKDTFVKRSRIITEIRKFLDGQGFIEVETPMLVSNAGGAA------ARPFNTHYNA 221

Query: 194 LPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           L +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 222 LDEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYH 280

Query: 248 DILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286
            +++  EN+ R + +      T+            F R    +AI++Y
Sbjct: 281 GMMDLTENMFRYLAQTVCGSTTIPYAEAMIDLGKPFERTTMVEAIKKY 328



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP
Sbjct: 455 ALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLFP 490


>gi|302679128|ref|XP_003029246.1| hypothetical protein SCHCODRAFT_69392 [Schizophyllum commune H4-8]
 gi|300102936|gb|EFI94343.1| hypothetical protein SCHCODRAFT_69392 [Schizophyllum commune H4-8]
          Length = 595

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 20/258 (7%)

Query: 22  RLSGWVHRVRPHGGII-FLDIRDHYGITQVVANP----DSACFEIAKSV-RSEWVLCIDG 75
           R+ G +  +R     + F DI       QV+AN     D A FE    + R   ++ + G
Sbjct: 123 RIVGRIFSMRASSSKLRFYDIHSEGQKVQVMANAQDAEDPAKFEEVHDIFRRGDIVGVVG 182

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLR 134
             M             G++ ++ + + +L+ +  ++P   FG ++  +  R++ R+LDL 
Sbjct: 183 TPMRTKK---------GELSIAPKTMTLLAPSLHQIPTSHFGLKD--QETRYRKRYLDLI 231

Query: 135 -RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
                 K  V R+RI+N +R  +    F+E  TP+ +  +        V    +      
Sbjct: 232 ISPNTRKIFVTRSRIVNYIRRFLDNLGFMEVETPMTSMIAGGATAKPFVTHHNDLNLDLF 291

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  G DR ++I   FR+E       P EF   +  M++ +  D+++  
Sbjct: 292 LRIAPELYLKQLVVGGLDRVYEIGRVFRNEGIDLTHNP-EFTICEFYMAYADMYDLMDIT 350

Query: 254 ENVLRGVFEEFSNGNTVS 271
           E ++ G+ +  + G T+ 
Sbjct: 351 EAMIEGLVKSLTGGTTLE 368



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+VM L  + N++EV LFP
Sbjct: 536 ALEHGLPPTGGWGIGIDRLVMFLTNSTNIKEVLLFP 571


>gi|284050824|ref|ZP_06381034.1| asparaginyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 463

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 120/310 (38%), Gaps = 55/310 (17%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCID 74
           G  V + GWV   R      F+++ D   +   QVV NPD   +  I + + +   + + 
Sbjct: 16  GEAVTVQGWVRTKRELKEFTFVEVNDGSCMANLQVVLNPDLTDYAAILRQLNTGASVEVV 75

Query: 75  GLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           G ++S  A+        GQ IEL A  + +   A+     +  +R    S  F      L
Sbjct: 76  GEIVSSPAK--------GQRIELKADTVRVYGEADPQTYVLQKKRH---SFEFLRTIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T     V R R   +       +   F+   TPI+TAS  EGA +    + ++  + 
Sbjct: 125 RSRTNTYGAVFRVRNACAAAVHQFFQERGFLWIHTPIITASDCEGAGELFSVTSLDLNNL 184

Query: 192 -----------------YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                             A      Q +  +MA  F   +   P FR E+  + R   EF
Sbjct: 185 PLTDTKAIDFSQDFFGKRAFLTVSGQLEAEIMALAFGNVYTFGPTFRAENSNTSRHLAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNN 273
           + ++ EM+F + D  ++  E  L+ +F+          EF N            N ++N 
Sbjct: 245 WMIEPEMAFCDLDGNMDLAEAFLKHIFKSVLEQCPEDLEFFNQRIDNSVLATADNIINNE 304

Query: 274 FLRICYDDAI 283
           F RI Y +AI
Sbjct: 305 FERITYTEAI 314


>gi|317144247|ref|XP_001819993.2| lysyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 463

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 19/199 (9%)

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-AR 178
           YP  ++F      L   T    I  R+ II  +R   +  +F+E +TPI+ + +    AR
Sbjct: 118 YPRHVQF------LADQTTTDIIKARSAIIQYLRQFFLDRSFMEVNTPIVNSIAGGAIAR 171

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F   +        +L  AP+ + + L+  GFDR F+I P FR+E       P EF   +
Sbjct: 172 PFYTSATEFPDRQLSLRIAPELWLKRLVVGGFDRVFEIGPSFRNEGIDKTHNP-EFTTCE 230

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNT----------VSNNFLRICYDDAI-RRYG 287
              ++   +D+L+  E++L G+ +   + N            S  F RI +   I  + G
Sbjct: 231 FYHAYANLEDLLSMTESLLSGMAQHIRDTNKDGTLKPTEVDFSTPFRRIDFLTGIEEKIG 290

Query: 288 TDKPDLRNPIIMHNVTEHF 306
              PDL +P  +  V + F
Sbjct: 291 RKLPDLTSPDAVAQVKQLF 309


>gi|312373072|gb|EFR20897.1| hypothetical protein AND_18332 [Anopheles darlingi]
          Length = 549

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 99/242 (40%), Gaps = 12/242 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G ++ G  +R+ GW+HR+R  G G++F+ +RD  G  Q V   D+ C        +  VL
Sbjct: 121 GAANRGVRIRVYGWIHRLRRQGKGLMFVTLRDGTGFLQCVLT-DTLC-----QTYNALVL 174

Query: 72  CIDGLVM--SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
             +  V       E        G  EL     E++ +A           E    ++   R
Sbjct: 175 STESSVQLFGTLNEVPAGKTAPGGHELKVDYWELIGLAPAGGADAILNEEAHPDVQLDNR 234

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            + +R +   K +  R  ++ + R       + E + P L  +  EG           + 
Sbjct: 235 HIMIRGENTSKILKMRDVVMQAFRSHYFDRGYTEVTPPTLVQTQVEGGSTLFKLDYFGEE 294

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y +  + +  D  F +A  +R E  R+ R   E+  ++ E  F+  +++
Sbjct: 295 AY--LTQSSQLYLETCIPALGD-VFCVAQSYRAEQSRTRRHLAEYSHIEGECPFITFEEL 351

Query: 250 LN 251
           LN
Sbjct: 352 LN 353



 Score = 40.4 bits (93), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 12/90 (13%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGI 539
           L+ N  EI  G +R+   + +L+ +   GI  +     V+ R          G  PHGG 
Sbjct: 466 LLPNVGEIVGGSMRSWKYDELLEGYKREGIDPKPYYWYVDQRV--------YGTQPHGGY 517

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G++R +  LL   ++REV L+P     C
Sbjct: 518 GLGLERFLCWLLNRYHIREVCLYPRFLERC 547


>gi|224536085|ref|ZP_03676624.1| hypothetical protein BACCELL_00950 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522304|gb|EEF91409.1| hypothetical protein BACCELL_00950 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 580

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV    D  C    K + +     +  L    
Sbjct: 59  VSVAGRMMTRRVMGKASFIELQDSKGRIQVYITRDDICPGEDKDLYNTVFKRLLDLGDFI 118

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             E        G+I + AQK+ +L+ + + PLP+        +   E PE +R++ R++D
Sbjct: 119 GIEGFVFRTQMGEISIHAQKLTVLAKSIK-PLPIVKYKDGVAYDSFEDPE-LRYRQRYVD 176

Query: 133 LR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L   D + +  +KR  +I +MR  +    + E  TPIL + +    AR F+         
Sbjct: 177 LVVNDGVKETFLKRATVIKTMRAVLDEAGYTEVETPILQSIAGGASARPFITHHNSLNMD 236

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ + + + + ++
Sbjct: 237 LY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-EFTCMELYVQYKDYNWMM 294

Query: 251 NTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
           +  E +L        G  E   +G T+S    + R+   DAI+
Sbjct: 295 SFTEKLLERICIAVNGSEETTIDGKTISFKAPYRRLPILDAIK 337



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+ ML+ G   ++EV  FP
Sbjct: 464 RALQFGMPPTSGIGIGIDRLTMLMTGKSYIQEVLFFP 500


>gi|154493632|ref|ZP_02032952.1| hypothetical protein PARMER_02972 [Parabacteroides merdae ATCC
           43184]
 gi|154086842|gb|EDN85887.1| hypothetical protein PARMER_02972 [Parabacteroides merdae ATCC
           43184]
          Length = 576

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 33/288 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLV 77
           V ++G +   R  G   F++++D  G  QV  + D  C E  K + +   + +L I   V
Sbjct: 55  VSIAGRIMSRRIMGKASFMELQDSEGRIQVYISRDDICPEENKDLYNIVFKKLLDIGDFV 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYR 129
                +        G+I + AQ+I +LS + + PLPV   ++         PE +R++ R
Sbjct: 115 ---GIKGFVFRTQMGEISVHAQEITVLSKSLK-PLPVVKYKDGVAYDGFNDPE-LRYRQR 169

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRV 186
           ++DL  +   K+I +KR  +I +MR  +    + E  TPIL  S P G  AR F+     
Sbjct: 170 YVDLVVNDGVKDIFMKRAAVIKTMRTALDEAGYTEVETPIL-QSIPGGASARPFITHHNS 228

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG--------EFYQLD 238
                Y L  A + Y + L+  GF+  ++I   FR+E       P         ++   +
Sbjct: 229 LDIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNPEFTCMELYVQYKDYN 287

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIR 284
             MSF EQ  +L  +   + G  E   +G T++    + R+   DAI+
Sbjct: 288 WMMSFTEQ--LLERICIAVNGTCESVVDGKTINFKAPYRRLPILDAIK 333



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP
Sbjct: 460 RALQFGMPPTSGIGIGIDRLVMLMTGQTTIQEVLLFP 496


>gi|313675358|ref|YP_004053354.1| lysyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312942056|gb|ADR21246.1| lysyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 576

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 132/306 (43%), Gaps = 38/306 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLV 77
           + ++G +   R  G   F +I+D  G  QV  N D  C +  K++ +   + +L I  ++
Sbjct: 54  ISIAGRLMSKRIMGKASFAEIQDSTGRIQVYVNRDEICPDEDKTLYNTVFKKLLDIGDII 113

Query: 78  MSRSAETINANIITGQI-ELSAQKIEILSVAEEL-PLPVFGEREYPE------------S 123
                  I   + T Q+ E+S    E+  +++ L PLP+  E    +             
Sbjct: 114 ------GIKGYVFTTQVGEISIHVKELFVLSKSLRPLPITKETTDEQGNVKRHDAFTDSE 167

Query: 124 IRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R++D+  +  + +   KRT+++NSMR  +    ++E  TPIL        AR F 
Sbjct: 168 QRYRQRYVDMIVNPEVRETFRKRTQLVNSMRTFLGDRGYLEVETPILQPLYGGAAARPFK 227

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                   + Y L  A + Y + L+  G+D  F+ A  FR+E       P EF Q+++ +
Sbjct: 228 THHNTLDMTLY-LRIANELYLKRLIVGGYDGVFEFAKDFRNEGMSRFHNP-EFTQVELYV 285

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ + + ++N +E ++  V  +      V      I +    +RY            M+ 
Sbjct: 286 AYKDYEWMMNLVEEMVEKVAMDIHGTTEVKVGENIINFQRPWKRY-----------TMYE 334

Query: 302 VTEHFV 307
             EHF 
Sbjct: 335 AIEHFT 340



 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  GIDR+ M++  + ++++V  FP
Sbjct: 464 RALEYGMPPTAGLGIGIDRLSMIMTNSNSIQDVLFFP 500


>gi|212697091|ref|ZP_03305219.1| hypothetical protein ANHYDRO_01656 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675866|gb|EEB35473.1| hypothetical protein ANHYDRO_01656 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 462

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 123/318 (38%), Gaps = 51/318 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFE-IAKSVRSEWVLCIDGLV 77
           +   GW+ + R    + F+++ D   +   QVV   D   FE I K   S  +  I  LV
Sbjct: 18  ITAQGWIRQARFTKNVGFIELNDGTIFKNLQVVIGKDLENFESIQKEHLSASLKVIGKLV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            + +A+           EL A K+E+L  ++E   P+  +R+  E +R     L +R +T
Sbjct: 78  KTNNAKQA--------YELQANKVEVLGHSDE-NFPIQKQRQSLEYMR-TIPHLRVRTNT 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+++  ++        FI  + P++TAS  EGA +    +  N          
Sbjct: 128 YRAVFRLRSKLAYALHKFFQEREFIYLNAPLITASDTEGAGEMFQVTTQNLEKPNLDKDG 187

Query: 198 PQQY-------KQLLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              Y       K  L  SG              +   P FR E+  + R   EF+ L+ E
Sbjct: 188 KVNYSKDFFGKKSYLTVSGQLEAEDYALALSNIYTFGPTFRAEESNTPRHAAEFWMLEPE 247

Query: 241 MSFVEQDDILNTMENVLRGVFE----------EFSNG----------NTVSN-NFLRICY 279
           ++F + +  ++  E +++ + E          EF N             V N  F RI Y
Sbjct: 248 LAFADYNVCMDVAEEMMKYMIEYVLENCKDEIEFFNERIDDTLIERLTKVKNAKFARITY 307

Query: 280 DDAIRRYGTDKPDLRNPI 297
            DAI +      D   P+
Sbjct: 308 TDAIEKLKNADVDFEYPV 325



 Score = 37.0 bits (84), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 5/98 (5%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
           + ND  ++ AF   LV    E+  G  R    + ++++  + G+  +  +N         
Sbjct: 364 RNNDGKTVAAFDM-LVPAVGELIGGSQREERYDELVKSMEDNGLKIDEYQNYLD----LR 418

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + G   H G   G +R VM L G KN+R+V  +P + N
Sbjct: 419 KYGTVVHSGYGLGFERAVMYLTGMKNIRDVIPYPRTVN 456


>gi|22300015|ref|NP_683262.1| asparaginyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|38258369|sp|Q8DG51|SYN_THEEB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|22296200|dbj|BAC10024.1| asparaginyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 462

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 28/270 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH---YGITQVVANPDSACFEIAKSVRSE 68
           L    VG  + + GWV   R      F+++ D     G+  V+ N  +A     K + + 
Sbjct: 9   LHQGQVGDRITVKGWVRTKRELKECTFVNLNDGSTLAGLQVVIPNTVAAATPTMKDLTT- 67

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
                 G     + E + +      IEL A++I +   A+    P+  +R   E +R   
Sbjct: 68  ------GAAAEFTGELVRSPGKNQAIELHAEEIHLWGTADPETYPLQKKRHSFEFLR-TI 120

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDF 180
             L  R +TL   +  R     ++        F+   TPI+TAS  EGA         D 
Sbjct: 121 AHLRPRTNTLGAVMRVRNACATAIHQFFQERGFLWVHTPIITASDCEGAGELFTVTTLDL 180

Query: 181 LVPSRVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             P +  +G       F+   A      Q +  +MA+ F   +   P FR E+  + R  
Sbjct: 181 TQPPKTPEGKIDFSQDFFGRRAYLTVSGQLEAEIMATAFTNVYTFGPTFRAENSNTSRHL 240

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            EF+ ++ EM+F +    +   E  L+ VF
Sbjct: 241 AEFWMVEPEMAFCDLRGDMELAEAFLQFVF 270


>gi|222623269|gb|EEE57401.1| hypothetical protein OsJ_07579 [Oryza sativa Japonica Group]
          Length = 665

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 112/251 (44%), Gaps = 17/251 (6%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           C D+ VS  G  V         R  G ++F+ +RD  G  Q+    DS   E  + +++ 
Sbjct: 119 CADVAVSIAGRIVAR-------RAFGKLVFMTVRDDSGTIQLYCEKDSLTEEQFEQLKTI 171

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             +           +T       G++ +  +  EIL+ +  LPLP           R++ 
Sbjct: 172 IDIGDIIGANGSIKKTEK-----GELSVYVKNFEILTKS-LLPLPDKYHGLTDVDKRYRQ 225

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRV 186
           R++D+  +    ++ + R + ++ +R  M +  FIE  TP+L  A+    AR F+     
Sbjct: 226 RYVDMIANPEVADVFRTRAKAVSEIRKTMESFGFIEVETPVLQGAAGGAEARPFITHHNS 285

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            Q   Y L  A + + + ++  G ++ ++I   FR+E   +   P EF  ++M  ++ + 
Sbjct: 286 LQRDLY-LRIATELHLKRMLVGGLEKVYEIGRIFRNEGISTRHNP-EFTTIEMYEAYSDY 343

Query: 247 DDILNTMENVL 257
           + ++N  E ++
Sbjct: 344 ESMMNLAEEIV 354



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + + GMPP  G+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 624 SLEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPV 660


>gi|150006587|ref|YP_001301331.1| lysyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|166229794|sp|A6L7P5|SYK_BACV8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|149935011|gb|ABR41709.1| lysyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
          Length = 576

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 13/213 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV    D  C +  K + +     +  L    
Sbjct: 55  VSVAGRMMSRRVMGKASFIELQDSKGRIQVYITRDDICPDENKEMYNTVFKRLLDLGDFI 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             E        G+I + A+K+ +LS + + PLP+        + + E PE +R++ R++D
Sbjct: 115 GIEGFVFRTQMGEISIHAKKLTVLSKSIK-PLPIVKYKDGVAYDKFEDPE-LRYRQRYVD 172

Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   K+I +KR+++ +SMR    ++ ++E  TPIL + +    AR F+         
Sbjct: 173 LAVNEEIKDIFIKRSKVYSSMREYFNSKGYMEVETPILQSIAGGAAARPFITHHNALDMP 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            Y +  A + Y + L+  GF+  ++I   FR+E
Sbjct: 233 LY-MRIASELYLKRLIVGGFEGVYEIGKNFRNE 264



 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+ ML+ G   ++EV  FP
Sbjct: 460 RALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFP 496


>gi|17535925|ref|NP_495454.1| lysyl (K) tRNA Synthetase family member (krs-1) [Caenorhabditis
           elegans]
 gi|14574222|gb|AAK68395.1|U41105_14 Lysyl (k) trna synthetase protein 1, isoform b [Caenorhabditis
           elegans]
          Length = 596

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 109/244 (44%), Gaps = 10/244 (4%)

Query: 17  VGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V   V ++G +H  R  G  ++F DI       Q++AN      ++      + +   D 
Sbjct: 125 VEEIVSVAGRIHSKRESGSKLVFYDIHGEGTHIQIMANAKFHTGDVDFVTLHDRIKRGDI 184

Query: 76  LVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           +  +  A    A    G++ L   +I ++      LP   FG ++  + +RF+ R+LDL 
Sbjct: 185 VGFTGRATRTKA----GELSLIPNEILQLTPCLHMLPHSHFGLKD--KELRFRKRYLDLI 238

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +  +  N V R++II  +R  +    F+E  TPI+   +        +    +      
Sbjct: 239 LNPRVKDNFVIRSKIITFLRRYLDNLGFLEVETPIMNQIAGGATAKPFITHHNDLDMNLF 298

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y ++L+  G DR +++   FR+E       P EF   +  M++ + +D++   
Sbjct: 299 LRVAPELYHKMLVVGGIDRVYEVGRLFRNEGIDLTHNP-EFTTCEFYMAYADYEDVIQLT 357

Query: 254 ENVL 257
           E++L
Sbjct: 358 EDLL 361



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M+L    N++EV LFP
Sbjct: 540 ALEYGLPPTGGWGMGIDRLSMILTDNNNIKEVLLFP 575


>gi|50552304|ref|XP_503562.1| YALI0E04939p [Yarrowia lipolytica]
 gi|49649431|emb|CAG79143.1| YALI0E04939p [Yarrowia lipolytica]
          Length = 473

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/352 (21%), Positives = 151/352 (42%), Gaps = 57/352 (16%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSAC 58
           +++ +T +   LG  D  S V ++GW+  V+    + FL+I D      V+A   PD   
Sbjct: 21  INQIKTENKHILGTQD-ASPVTINGWIKSVQKLKNVAFLNISDGNCAQGVMAVLQPDQVT 79

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQ-----IELSAQKIEILSVAEELPL- 112
            ++          C+          ++  N+++ Q     +EL A+ +++    +E P+ 
Sbjct: 80  SDLTTGA------CV----------SVKGNLVSSQGKKQGLELQAESVKVTGTVDEYPIQ 123

Query: 113 PVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILT 170
             F ++E+  ++        LR R +++ + ++      +      AEN F++ + P+LT
Sbjct: 124 KKFHKQEFLRTLP------ALRWRTSVNSSTLRYRSFCMAQMTNFFAENDFVQTNPPLLT 177

Query: 171 ASSPEGARDFLVPSRVNQGSFY-----ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           +S  EGA +    +   +G  +     A      Q    ++A+   R +   P FR E+ 
Sbjct: 178 SSDCEGAGEVFKVAGGGKGDKFFGDKPAYLTVSTQLHLEVLAAAVGRVWTFTPAFRAENS 237

Query: 226 RSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF-SNGNTVSNNFLRICYDDAI 283
            ++R   EF+  + E+SF++  + +++  E +++         GN   N+ L     DA 
Sbjct: 238 DTNRHLSEFWMAEAEISFIDDLEPLMDLAEGMVKSCLAPLMEEGNKARNDLL-----DA- 291

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN---------PGYEV 326
           RR    K +L +   M N    F    ++   KIL++          P YEV
Sbjct: 292 RRSAEQKEELLDRWDMANC--DFPRLTYKQAIKILNLQHLKEPFAHRPDYEV 341



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G +R    + +L+     G+ K  +E          + G  PHGG   G +R++  
Sbjct: 396 EVIGGSVREDNYDTLLKNIETTGMDKSALE----WYLELRKQGSTPHGGFGMGFERLISY 451

Query: 550 LLGAKNVREVSLFPMSQNFC 569
             G +N+R+V+ FP   + C
Sbjct: 452 ATGIENIRDVTAFPRWVDNC 471


>gi|297284495|ref|XP_001104312.2| PREDICTED: lysyl-tRNA synthetase isoform 1 [Macaca mulatta]
          Length = 625

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           ++++G +H  R  GG +IF D+R      QV+AN      +     I   +R   ++ + 
Sbjct: 154 LKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQ 213

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   +I +LS     LP   FG ++  +  R++ R+LDL
Sbjct: 214 G---------NPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 262

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
              D + +  + R++++  +R  +    F+E  TP++    P GA  + F+        +
Sbjct: 263 ILNDFVRQKFIIRSKMVTYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMN 321

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++
Sbjct: 322 LY-MRIAPELYHKILVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDVM 379

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +  +    ++
Sbjct: 380 EITEKMVSGMVKHITGSYKIT 400



 Score = 45.1 bits (105), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   G+DR+ M L  + N++EV LFP
Sbjct: 564 ALEYGLPPTGGFGMGLDRVAMFLTDSNNIKEVLLFP 599


>gi|269217201|ref|ZP_06161055.1| lysine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269129338|gb|EEZ60423.1| lysine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 509

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 27/250 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS----EWVLCIDGL 76
           V++SG +  +R  G I F+ IRD  G  Q+    +    E    V+     +WV     +
Sbjct: 73  VKVSGRIMAIRNQGKIAFIVIRDLTGDIQLFCRVNILGEEAYDDVKDLDVGDWVGAEGTV 132

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           + +R           GQ+ ++   + +LS +   PLP        + IR++ R++DL   
Sbjct: 133 IRTRR----------GQLSVAPTSVRLLSKSLR-PLPEKFHGLSDKEIRYRQRYVDLVMN 181

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
             +    VKR  I++++R  M ++ F E  TP+L        AR F+         FY  
Sbjct: 182 QDVRDTFVKRFAIVSAIRRYMESQGFFEVETPMLQPIMGGANARPFVTHHNALDMDFYLR 241

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                  K+LL+  G +R F+I   FR+E  DP  +    EF  ++   +F +    L  
Sbjct: 242 IATELPLKRLLVG-GLERVFEIGRIFRNEGMDPYHN---PEFTTIEAYQAFSD----LEG 293

Query: 253 MENVLRGVFE 262
           M ++ RG+ +
Sbjct: 294 MMDLTRGMIQ 303



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  ++ +R+V LFP
Sbjct: 466 RALEYGMPPAGGVGVGIDRLVMLLTDSETIRDVLLFP 502


>gi|294893115|ref|XP_002774338.1| aspartyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239879676|gb|EER06154.1| aspartyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 257

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G E+ SG  R H ++++ +    +G+    ++        AF+ G  PH G   
Sbjct: 172 YDIFIRGEEVTSGAQRIHDADMLAEKAQRLGVELSTIQPYVD----AFKYGSYPHAGAGV 227

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R VS+FP
Sbjct: 228 GLERVVMLFLGLPNIRLVSMFP 249


>gi|256068907|ref|XP_002570964.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238651840|emb|CAZ38649.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 80

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 41/64 (64%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           A   G PPHGGIA G+DR++ + + AK++R+V  FP + +  DLL G+P+ V  E L + 
Sbjct: 12  ALNSGTPPHGGIALGLDRLIAIFVNAKSIRDVIAFPKAADGKDLLCGTPTMVDDEILSQY 71

Query: 588 GLRI 591
            + +
Sbjct: 72  CISV 75


>gi|87310517|ref|ZP_01092646.1| asparaginyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87286738|gb|EAQ78643.1| asparaginyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 463

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 119/313 (38%), Gaps = 49/313 (15%)

Query: 12  LGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSE 68
           L    VG+ V+L GWV   R    G  F+++ D    G  QVVA  D A       V+  
Sbjct: 10  LSADQVGNQVKLEGWVRTRRDSKAGFSFIELNDGSCMGNIQVVA--DGALTNYESEVKKL 67

Query: 69  WVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
              C       R    I A+   GQ  E+ A ++ +   A+    P+  +R   E +R +
Sbjct: 68  SAGC-----SVRILGEIVASQGKGQTTEIQASEVHVYGWADPESYPLQKKRHSMEKLR-E 121

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR--------D 179
           +  L  R +T       R  +  S+        F+   TPI+TAS  EGA         D
Sbjct: 122 WAHLRPRTNTFGAVFRVRNCVSRSIHNFFQERGFLYVHTPIITASDCEGAGEMFKVTTLD 181

Query: 180 FLVPSRVN-----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLP 231
              P +          F+  P       QL   + A+     +   P FR E+  + R  
Sbjct: 182 LDAPPKTGGKVDYTQDFFERPSYLTVSGQLEGEIFATALGNVYTFGPTFRAENSNTSRHL 241

Query: 232 GEFYQLDMEMSFVE--------QDDILNTMENVLRGVFEEFSNGN-------------TV 270
            EF+ ++ EM+FV+        +D I   + +V+R   ++    N               
Sbjct: 242 AEFWMVEPEMAFVDLEGNMQVAEDFIKRIISDVMRDCGDDLQFFNDRIDDTVLATLTAMA 301

Query: 271 SNNFLRICYDDAI 283
              FLR+ Y DAI
Sbjct: 302 DGEFLRVSYTDAI 314


>gi|312978417|ref|ZP_07790159.1| lysine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|310894760|gb|EFQ43832.1| lysine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 511

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 21/258 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      ++I K       L I+G V
Sbjct: 56  TKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIEGEV 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RR 135
           M            TG++ + A  +  LS A   LP    G ++  E+I ++ R+LDL   
Sbjct: 116 MKTD---------TGELTIRALHVTFLSKALRPLPDKYHGLKDV-EAI-YRQRYLDLITN 164

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
              +   V RT+II ++R  + ++NF+E  TP+L  + P G  AR F+        + Y 
Sbjct: 165 HDSYMRFVHRTQIIQAIRDYLNSQNFLEVETPVL-HNIPGGAEARPFITHHNALDINLYM 223

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                   K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  
Sbjct: 224 RIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDYHDVMDEA 281

Query: 254 ENVLRGVFEEFSNGNTVS 271
           E ++R   +  S+   ++
Sbjct: 282 EGIIRAAAKVVSDDGKIT 299



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 449 RAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 485


>gi|119496887|ref|XP_001265217.1| lysyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119413379|gb|EAW23320.1| lysyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 467

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 103/231 (44%), Gaps = 34/231 (14%)

Query: 102 EILSVAEELP---------LPVFGERE----YPESIRFKYRFLDLRRDTLHKNIVK-RTR 147
           E+  +A ELP         +PV  E      YP  ++F         D    +I++ R+ 
Sbjct: 82  ELTVLATELPRLLSPCLHDVPVDAEEHETSPYPRHVQFLA-------DQKAADIIRARSA 134

Query: 148 IINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
           II  +R   +  +F+E STPI+ + +    AR F   +        +L  AP+ + + L+
Sbjct: 135 IIQFLRQFFLDRSFMEVSTPIIGSIAGGAMARPFQTSATEFSDRQLSLRIAPELWLKRLV 194

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV---FEE 263
             GFD+ F+I P FR+E       P EF   +   ++   +D+++  EN+L G+    +E
Sbjct: 195 VGGFDKVFEIGPSFRNEGLDKTHNP-EFTTCEFYHAYANLEDLMSITENLLSGMAAHIQE 253

Query: 264 FSNGNTV-------SNNFLRICYDDAIR-RYGTDKPDLRNPIIMHNVTEHF 306
           F+   ++       S  F R+ +   I  + G   PDL  P  +  V + F
Sbjct: 254 FNKNASLKPPEVDFSAPFRRVDFTTGIEGKIGRRLPDLTTPDALDQVNQLF 304


>gi|332534753|ref|ZP_08410581.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035840|gb|EGI72324.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 511

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 137/319 (42%), Gaps = 43/319 (13%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F  I+D  G  Q  A+ D     + K ++ ++     G ++      +N    +G+ +L 
Sbjct: 76  FFVIQDMKGRVQAYASKD-----VQKDLKEKYGQLDTGDIIGVKG-ALNK---SGKGDLY 126

Query: 98  AQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCR 155
            +  E   + + L PLP        +  +++ R++DL  +   +   + R++++  +R  
Sbjct: 127 VEMTEYQLLTKSLRPLPEKFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVEGIRRF 186

Query: 156 MIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
           +   +F+E  TP+L    P GA  R F+          Y L  AP+ Y + L+  GFDR 
Sbjct: 187 LADRDFMEVETPMLQVI-PGGASARPFVTHHNALDIDMY-LRIAPELYLKRLVVGGFDRV 244

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           F+I   FR+E   +   P EF  ++   ++ +  D++N  E++LR V E       V N 
Sbjct: 245 FEINRNFRNEGLSTRHNP-EFTMIEFYQAYADYIDLMNITEDMLRTVAENVLGSAIVVNT 303

Query: 274 -------------------FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
                              F R+   DAI +Y    P+  +  + ++   HF   E + +
Sbjct: 304 TKDENGEVIDSVEYDFGQPFTRLSMADAILKYN---PEF-DAAVFNDPENHF--EELKAY 357

Query: 315 SKILSVN-PGYEVWAIPAK 332
           +K + V  P   VW  P K
Sbjct: 358 AKQVHVKIPENCVWG-PGK 375



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VML   +  +++V LFP
Sbjct: 468 RALEYGLPPTAGEGIGIDRLVMLFTDSSTIKDVILFP 504


>gi|306821054|ref|ZP_07454672.1| lysine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550890|gb|EFM38863.1| lysine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 500

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 127/285 (44%), Gaps = 28/285 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCID 74
           G  V ++G +   R  G   F+D++D  G  Q  A  D    E+ K+ +      ++ + 
Sbjct: 53  GKEVSVAGRMMSFRSFGKSTFVDVQDKDGKIQCYAKKDELGEELYKAFKEFDIGDIIGVT 112

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G+V     + I+  I    ++L ++ + IL      P    G ++    +R++ R++DL 
Sbjct: 113 GVVFKTQKDEIS--IKMHDVKLLSKSLRIL------PEKYHGLKDM--DLRYRQRYVDLI 162

Query: 135 RD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
            +  + +  + R + I ++R  +    FIE  TPIL T +    AR F+          Y
Sbjct: 163 VNPEVKEAFLTRNKAIKALREFLEQREFIEVETPILNTIAGGATARPFITHHNTLDIDMY 222

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF++ +++   FR+E       P E+  +++  ++ + +DI+  
Sbjct: 223 -LRIANELYLKRLIVGGFEKVYEMGRMFRNEGMDIKHNP-EYTAMELYQAYADYEDIMKL 280

Query: 253 MENVLRGVFEEFSNGNTVSNN----------FLRICYDDAIRRYG 287
            E ++       + G+T+ N           + R+   DAI+ Y 
Sbjct: 281 TEELV-AYMAVAATGSTLINYQGKQIDLKPPWRRLSMTDAIKEYA 324



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR++MLL  + ++R+V LFP
Sbjct: 450 AIEVGLPPTGGLGIGIDRVIMLLTNSASIRDVILFP 485


>gi|282860274|ref|ZP_06269344.1| asparagine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282586948|gb|EFB92183.1| asparagine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 463

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 114/274 (41%), Gaps = 32/274 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  +D G  + + GWV   R    + F+ + D   I   QVV +P S   E  
Sbjct: 3   RTKVVDALSSTDFGKEIIVKGWVRSHRSSKAVDFIALNDGSTIKNIQVVVDPSSIDEETL 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVA-EELPLPVFGER-E 119
           KS+ +   + + GL++    +        GQ  E+  + I I  +   + P+   G+  E
Sbjct: 63  KSITTGACIGVTGLLVESQGK--------GQTSEIQGKDIVIYGLCPSDYPMQKKGQSFE 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           Y      KY  + LR +T       R  +  ++        F    TP++T S  EGA +
Sbjct: 115 YMR----KYGHMRLRTNTFGAVFRIRHNMAIAIHRYFHEHGFYYFHTPLITGSDAEGAGN 170

Query: 180 -FLVPS----RVNQGSFYALPQ----------APQQYKQLLMASGFDRYFQIAPCFRDED 224
            F V +    RV +       Q             Q +  L A+     +   P FR E+
Sbjct: 171 MFQVTTLDLERVAKSGKVEYEQDFFGKRTHLTVSGQLEGELGATALGAIYTFGPTFRAEN 230

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             + R   EF+ ++ E++F++++D+++  E+ ++
Sbjct: 231 SNTPRHLAEFWMVEPEVAFIDKEDLMDLEEDFIK 264


>gi|242310600|ref|ZP_04809755.1| lysyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239522998|gb|EEQ62864.1| lysyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 497

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 136/309 (44%), Gaps = 34/309 (11%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLC 72
            D     +++G +  VR  G   FL I D+ GI Q+    N     FEI K       + 
Sbjct: 55  KDTSVNAQVAGRIKFVRLMGKAAFLKIEDNSGILQIYLSKNELGENFEIFKKY-----IE 109

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           +  +++++    +     TG++ L A + ++L+ A   PLP          +R++ R+LD
Sbjct: 110 VGDIIVAKGFPFVTK---TGELSLHALEFKLLTKAIS-PLPEKYHGLVDIEMRYRQRYLD 165

Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGA--RDFLVPSRVNQ 188
           L     +    V R++I++ +R R   EN F+E  TP++    P GA  + F+       
Sbjct: 166 LIMNKEVRDTFVLRSKIVSCVR-RFFEENGFLEVETPMM-HPIPGGANAKPFVTFHNALN 223

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++ +  D
Sbjct: 224 VERY-LRIAPELYLKRLVVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYKDYKD 281

Query: 249 ILNTMENVLRGVFEE--------FSNGNTVSNNFLRICYDDAI-------RRYGTDKPDL 293
           ++   + +   +F +        F+      + F  I Y D++       R   TD+  L
Sbjct: 282 LIKITKALFDYLFAQLNLPKILKFNEKEIDFSEFREISYLDSLVEIGGIPREVATDRDKL 341

Query: 294 RNPIIMHNV 302
            + +I +NV
Sbjct: 342 YDYLIANNV 350



 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMP 534
           A +++L   G EIA+G    +      + F    I+KE  +     +      A   GMP
Sbjct: 401 ADRFELFIGGSEIANGFSELNDPLDQYERFKEQVIAKEAGDEEAQYMDEDYITALSYGMP 460

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL G   +++V LFP
Sbjct: 461 PTAGEGIGIDRLVMLLTGHNIIKDVILFP 489


>gi|60683052|ref|YP_213196.1| lysyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|253566194|ref|ZP_04843648.1| lysyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|265766944|ref|ZP_06094773.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|81313892|sp|Q5L9E5|SYK_BACFN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|60494486|emb|CAH09283.1| putative lysyl-tRNA synthetase, heat inducible [Bacteroides
           fragilis NCTC 9343]
 gi|251945298|gb|EES85736.1| lysyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|263253321|gb|EEZ24797.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301164518|emb|CBW24077.1| putative lysyl-tRNA synthetase, heat inducible [Bacteroides
           fragilis 638R]
          Length = 575

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 31/222 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F++++D  G  QV    D  C     E+  +V    +     +
Sbjct: 55  VSVAGRMMSRRIMGKASFIELQDSKGRIQVYITRDDICPGEDKEMYNTVFKRLLDLGDFI 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I+G V              G+I + AQK+ +L+ + + PLP+        +   E PE 
Sbjct: 115 GIEGFVFRTQM---------GEISIHAQKLTVLAKSIK-PLPIVKYKDGVTYDSFEDPE- 163

Query: 124 IRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           +R++ R++DL  +   K+I +KR+++ +SMR    ++ ++E  TPIL A +    AR F+
Sbjct: 164 LRYRQRYVDLAVNEGVKDIFIKRSKVYSSMREYFNSKGYMEVETPILQAIAGGAAARPFM 223

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
                     Y +  A + Y + L+  GF+  ++I   FR+E
Sbjct: 224 THHNALDIPLY-MRIASELYLKRLIVGGFEGVYEIGKNFRNE 264



 Score = 45.1 bits (105), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+ ML+ G   ++EV  FP
Sbjct: 460 RALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFP 496


>gi|149927858|ref|ZP_01916109.1| lysyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149823480|gb|EDM82711.1| lysyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 510

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 129/295 (43%), Gaps = 30/295 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V +SG +   R  G   F  ++D  G  Q   N +     + + V  E+     G +
Sbjct: 66  GIEVSVSGRMMLKRVMGKASFATVQDGTGRIQFYINNEG----VGEGVHGEFKHWDLGDI 121

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-RR 135
           ++   +    N    + ELS    EI  +A+ L PLP        + I+++ R++DL   
Sbjct: 122 IAAKGKLFKTN----KGELSVHCTEIHLLAKSLRPLPDKFHGLADQEIKYRQRYVDLIVS 177

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           +      V R+R ++S+R  M    F+E  TP+L    P GA  + F+          Y 
Sbjct: 178 EETRSTFVARSRAMSSVRNFMADHGFLEVETPMLH-PIPGGASAKPFITHHNALDMEMY- 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D+++  
Sbjct: 236 LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYWNYRDLMDFT 294

Query: 254 ENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRR----YGTDKPDLRN 295
           E V++      +             +S  F R+   +AI++    YGT+  DL+N
Sbjct: 295 EQVIQHAATTATGSAKLTYQGRDLDLSKPFARLTIVEAIQKYFPEYGTE--DLQN 347



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+G    +  E     F     +KE  ++          RA + GMPP 
Sbjct: 418 RFELFITGREIANGFSELNDPEDQADRFKKQVEAKEAGDDEAMFFDADFIRALEYGMPPT 477

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR++ML+  + N+R+V LFP
Sbjct: 478 GGCGIGIDRLMMLITDSPNIRDVILFP 504


>gi|152976944|ref|YP_001376461.1| asparaginyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189083268|sp|A7GTK8|SYN_BACCN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|152025696|gb|ABS23466.1| asparaginyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 463

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/323 (22%), Positives = 127/323 (39%), Gaps = 61/323 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V++SGW+  +R      F+++ D   +   Q+V + +   F EI K   S  +      +
Sbjct: 21  VQVSGWIRNLRDSKVFGFIELNDGSFFKSVQIVFDTELDNFKEITKLPLSSSIRVEGKFI 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            + +A+           E+ A+KIEI  +++    P+  +R   E +R       LR  T
Sbjct: 81  ATPTAKQ--------PFEIKAEKIEIEGLSDS-DYPLQKKRHTFEYLR---TIAHLRPRT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              +   R R I +       +   F+   TPI+T S  EGA +     RV       LP
Sbjct: 129 NAFSATFRVRSIAAYAIHKFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTHDMNNLP 185

Query: 196 QAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           +                       Q      A  F   +   P FR E+  + R   EF+
Sbjct: 186 KGEDGQVDDSKDFFGRETNLTVSGQLPAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFW 245

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNF 274
            ++ E++F E +D+++  E++L+   +          EF N            N ++++F
Sbjct: 246 MVEPEIAFAELEDVMDLTEDMLKYAMKYVLEHAPEEMEFFNKFVDKTVLERMNNVINSDF 305

Query: 275 LRICYDDAIRRYGTDKPDLRNPI 297
            RI Y +AI+       D + P+
Sbjct: 306 GRITYTEAIKVLQESGADFKYPV 328


>gi|213409495|ref|XP_002175518.1| lysyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212003565|gb|EEB09225.1| lysyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 541

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 27/268 (10%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVAN----PD---SACFEIAKSVRSEWVLC 72
           V + G + R+R  G G++F DI  +    Q+  +    PD   S C +    +R   ++ 
Sbjct: 97  VSICGRLSRLRVFGSGLVFADIVQNGDSIQLAFSKLRFPDVEQSDCMKAVHCLRRGDIVA 156

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEIL--SVAEELPLPVFGEREYPESIRFKYRF 130
           + G V             +G++ +   K   L     +++P  +   +EY +     Y  
Sbjct: 157 VSGFV---------GTTKSGELTVFVDKKPTLLAPCLQDIPEKLNITKEYSKKQCLSY-- 205

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQG 189
             L       +I KR + I+S+R      +++E  TP+L+       AR F   S    G
Sbjct: 206 --LVNTDTADHIRKRFQTISSLRKYFTEHDYLEVETPVLSRHFGGAAARPF--KSTDIHG 261

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           S  ++  AP+ + + L+ SGFDR F++  CFR+E   +   P EF   ++  ++   +++
Sbjct: 262 SPLSMRCAPEIWLKQLVISGFDRIFEVGKCFRNEGIDATHNP-EFTSCEIYTAYSNLEEL 320

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRI 277
                +VLR +F + +    V N+ L +
Sbjct: 321 QEMTVDVLRFIFHQVNGSLQVPNSKLTL 348


>gi|153808814|ref|ZP_01961482.1| hypothetical protein BACCAC_03114 [Bacteroides caccae ATCC 43185]
 gi|149128640|gb|EDM19858.1| hypothetical protein BACCAC_03114 [Bacteroides caccae ATCC 43185]
          Length = 576

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 41/292 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F++++D  G  QV    D  C     E+  +V    +     +
Sbjct: 55  VSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPGEDKELYNAVFKRLLDLGDFI 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I+G V              G+I + A+K+ +L+ + + PLP+        +   E PE 
Sbjct: 115 GIEGFVFRTQ---------MGEISIHAKKLTVLAKSIK-PLPIVKYKDGVAYDSFEDPE- 163

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           +R++ R++DL   D + +  +KR  ++ ++R  +    + E  TPIL + +    AR F+
Sbjct: 164 LRYRQRYVDLVVNDGVKETFLKRATVVKTLRNALDEAGYTEVETPILQSIAGGASARPFI 223

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ +
Sbjct: 224 THHNSLDIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP-EFTCMELYV 281

Query: 242 SFVEQDDILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
            + + + ++N  E +L        G  E   +G T+S    + R+   DAI+
Sbjct: 282 QYKDYNWMMNFTEKLLERICIAVNGCTESVVDGKTISFKAPYRRLPILDAIK 333



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           R+ Q GMPP  GI  GIDR+VML+ G   ++EV  FP
Sbjct: 461 RSLQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFP 497


>gi|313889970|ref|ZP_07823607.1| lysine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121628|gb|EFR44730.1| lysine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 496

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 120/263 (45%), Gaps = 23/263 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
           +Y   +  DL   D+     ++G +   R  G + F  I+D  G  Q+    D+     +
Sbjct: 47  KYAEKTKEDL--HDLNEKAVIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGDENY 104

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLP-VFGE 117
           +I K       L ++G +M            T   ELS +   +  +++ L PLP  F  
Sbjct: 105 DIFKKADLGDFLGVEGEIMR-----------TDMGELSIKATHLTHLSKSLRPLPEKFHG 153

Query: 118 REYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
               E+I ++ R LDL   R++ ++  V R+RII+ +R  + +++F+E  TP+L   +  
Sbjct: 154 LTDIETI-YRKRHLDLISNRESFNR-FVTRSRIISEIRRYLDSKDFLEVETPVLHNEAGG 211

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF 
Sbjct: 212 AAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFT 270

Query: 236 QLDMEMSFVEQDDILNTMENVLR 258
            +++  ++ +  DI+N  E +++
Sbjct: 271 SIEVYEAYADFQDIMNLTEGIIQ 293



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL    ++R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTNTTSIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|291008865|ref|ZP_06566838.1| lysyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 1099

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 10/231 (4%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +  G    ++G V R+R HGG+ F  +RD  G  QV+   D +  ++  + R E  L   
Sbjct: 651 TRTGETTSVAGRVMRLRDHGGLCFATVRDWSGDLQVLLTADDSGHDLLVAWRGEVDL--- 707

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G  +S + E + ++   G++ + A+   +       PLP           R + R LDL 
Sbjct: 708 GDQVSVTGEVVTSD--RGELTVLAKSWTLAGKCLH-PLPDKHRGLSDPHSRVRARHLDLI 764

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFY 192
                +++++ R+   +++R  ++  +F+E  TP+L        AR F           Y
Sbjct: 765 TRPEARSVLRARSAATHALRDVLVRSDFVEVETPVLQPVRGGANARPFSTHINAYDLRLY 824

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            L  AP+ Y + L   G +R F+I   FR+E       P EF  L+   +F
Sbjct: 825 -LRIAPELYLKRLCVGGVERLFEIGRAFRNEGVSHKHNP-EFTMLEAYQAF 873



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 13/94 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +G          R  +++    A      + +V E+       A +
Sbjct: 1004 AERWDLVAFGTELGTGYSELTDPVEQRRRLADQARLAAEGDAEAMDVDED----FLTALE 1059

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              MPP GG+  G+DR+VMLL G +++R+   FP+
Sbjct: 1060 YAMPPTGGLGLGVDRLVMLLTG-RSIRDTLAFPL 1092


>gi|149374725|ref|ZP_01892499.1| Lysyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149361428|gb|EDM49878.1| Lysyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 510

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 24/200 (12%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP   +       R+++R++DL  +   + +   R++II+ MR      +F+E  TP+L
Sbjct: 139 PLPEKHKGLTDTEARYRHRYVDLMVNEDSRRVFYARSKIISVMRQYFTDRDFMEVETPML 198

Query: 170 TASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
               P GA  R F+          Y L  AP+ + + L+  GF+R F+I   FR+E   +
Sbjct: 199 QVI-PGGATARPFVTHHNALGIDMY-LRIAPELFLKRLVVGGFERVFEINRNFRNEGLST 256

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-------------- 273
              P EF  ++   ++ + +D+++  E++LR + ++     TV N               
Sbjct: 257 RHNP-EFTMVEFYQAYADYNDLMDLTEDMLRTIAQKVLGTTTVVNTRTLSDGEEETIEYD 315

Query: 274 ----FLRICYDDAIRRYGTD 289
               F R+   DAI RY  D
Sbjct: 316 FGKPFERLTVVDAILRYNPD 335



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 6/98 (6%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY 526
           K ND    + F++     G EIA+G    + +E   + F +    K+  ++    +   Y
Sbjct: 400 KDNDTFVTERFEF--FVGGREIANGFSELNDAEDQAERFQDQVAEKDAGDDEAMFYDEDY 457

Query: 527 -RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A + G+PP  G   GIDR+ MLL  + ++R+V LFP
Sbjct: 458 VMALEYGLPPTAGEGIGIDRLAMLLTDSASIRDVILFP 495


>gi|149192199|ref|ZP_01870416.1| lysyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148833957|gb|EDL50977.1| lysyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 505

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 115/244 (47%), Gaps = 27/244 (11%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRII 149
           G + ++ ++ E+L+ A   PLP        + +R++ R++DL    D+    IV R++++
Sbjct: 128 GDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFIV-RSKLV 185

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           +S+R  M ++ ++E  TP++    P GA  R F+          Y L  AP+ Y + L+ 
Sbjct: 186 SSIRNFMSSKGYLEVETPMMHVI-PGGATARPFITHHNALDIDMY-LRVAPELYLKRLVV 243

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            GFDR F+I   FR+E   S R   EF  ++   ++ +  D+++  E +L  V  +    
Sbjct: 244 GGFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYQAYADYKDLMDLTEEMLSTVAMDVLGS 302

Query: 268 NTV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTEHFVHSE 310
            ++            + R+   DAI+ Y  +        + DL N  +M ++ +  VH E
Sbjct: 303 TSMPYGDETVEFGGKYARMSMFDAIKHYNPEHEQIQALTEEDLTNRELMVSIAKS-VHVE 361

Query: 311 FRVF 314
              F
Sbjct: 362 VETF 365



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ ML      +R+V LFP
Sbjct: 464 ALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFP 499


>gi|134101270|ref|YP_001106931.1| lysyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133913893|emb|CAM04006.1| lysyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 1098

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 10/231 (4%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +  G    ++G V R+R HGG+ F  +RD  G  QV+   D +  ++  + R E  L   
Sbjct: 650 TRTGETTSVAGRVMRLRDHGGLCFATVRDWSGDLQVLLTADDSGHDLLVAWRGEVDL--- 706

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G  +S + E + ++   G++ + A+   +       PLP           R + R LDL 
Sbjct: 707 GDQVSVTGEVVTSD--RGELTVLAKSWTLAGKCLH-PLPDKHRGLSDPHSRVRARHLDLI 763

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFY 192
                +++++ R+   +++R  ++  +F+E  TP+L        AR F           Y
Sbjct: 764 TRPEARSVLRARSAATHALRDVLVRSDFVEVETPVLQPVRGGANARPFSTHINAYDLRLY 823

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            L  AP+ Y + L   G +R F+I   FR+E       P EF  L+   +F
Sbjct: 824 -LRIAPELYLKRLCVGGVERLFEIGRAFRNEGVSHKHNP-EFTMLEAYQAF 872



 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 13/94 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +G          R  +++    A      + +V E+       A +
Sbjct: 1003 AERWDLVAFGTELGTGYSELTDPVEQRRRLADQARLAAEGDAEAMDVDED----FLTALE 1058

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              MPP GG+  G+DR+VMLL G +++R+   FP+
Sbjct: 1059 YAMPPTGGLGLGVDRLVMLLTG-RSIRDTLAFPL 1091


>gi|315222516|ref|ZP_07864405.1| lysyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188202|gb|EFU21928.1| lysyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 505

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 118/263 (44%), Gaps = 19/263 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + ++     ++G +   R  G + F  I+D  G  Q+    D+     ++I K       
Sbjct: 66  LHELAETATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDTVGEENYQIFKKADIGDF 125

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L I+G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 126 LGIEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 174

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R+RI++ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 175 YLDLISNRESFER-FVTRSRIVSEIRRYLDNQGFLEVETPVLHNEAGGAAARPFITHHNA 233

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R +++   FR+E   +   P EF  ++   ++ + +
Sbjct: 234 QNIDMVLRIATELHLKRLIVGGMERVYEMGRIFRNEGMDATHNP-EFTTIEAYQAYADFE 292

Query: 248 DILNTMENVLRGVFEEFSNGNTV 270
           DI++  E +++   +  ++  +V
Sbjct: 293 DIMDLTEGIIQSAAKAVTDAESV 315



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR++MLL    ++R+V 
Sbjct: 440 LARFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLIMLLTDVTSIRDVL 499

Query: 561 LFP 563
           LFP
Sbjct: 500 LFP 502


>gi|115447385|ref|NP_001047472.1| Os02g0623500 [Oryza sativa Japonica Group]
 gi|48716234|dbj|BAD23770.1| putative lysyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113537003|dbj|BAF09386.1| Os02g0623500 [Oryza sativa Japonica Group]
 gi|215694818|dbj|BAG90009.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 586

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 114/251 (45%), Gaps = 17/251 (6%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           C D+ VS       ++G +   R  G ++F+ +RD  G  Q+    DS   E  + +++ 
Sbjct: 119 CADVAVS-------IAGRIVARRAFGKLVFMTVRDDSGTIQLYCEKDSLTEEQFEQLKTI 171

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             +           +T       G++ +  +  EIL+ +  LPLP           R++ 
Sbjct: 172 IDIGDIIGANGSIKKTEK-----GELSVYVKNFEILTKS-LLPLPDKYHGLTDVDKRYRQ 225

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRV 186
           R++D+  +    ++ + R + ++ +R  M +  FIE  TP+L  A+    AR F+     
Sbjct: 226 RYVDMIANPEVADVFRTRAKAVSEIRKTMESFGFIEVETPVLQGAAGGAEARPFITHHNS 285

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            Q   Y L  A + + + ++  G ++ ++I   FR+E   +   P EF  ++M  ++ + 
Sbjct: 286 LQRDLY-LRIATELHLKRMLVGGLEKVYEIGRIFRNEGISTRHNP-EFTTIEMYEAYSDY 343

Query: 247 DDILNTMENVL 257
           + ++N  E ++
Sbjct: 344 ESMMNLAEEIV 354



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + + GMPP  G+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 545 SLEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPV 581


>gi|330817653|ref|YP_004361358.1| Lysyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327370046|gb|AEA61402.1| Lysyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 509

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 127/287 (44%), Gaps = 28/287 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+L+G +   R  G   F  ++D  G  Q    P     E   + + +W L   G +++ 
Sbjct: 69  VKLAGRMMLRRVMGKASFATVQDGSGQIQFFVTPADVGAETYDAFK-KWDL---GDIVAA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRDTLH 139
           S      N    + ELS +  E+  +A+ L PLP        + +R++ R++DL      
Sbjct: 125 SGVLFRTN----KGELSVKCTELRLLAKALRPLPDKFHGLADQEMRYRQRYVDLIVTPET 180

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQ 196
           +N  + RT+ I S+R  M   +F+E  TP+L    P GA  + F+          + L  
Sbjct: 181 RNTFRARTKAIASIRKFMADADFMEVETPMLH-PIPGGATAKPFVTHHNALDMEMF-LRI 238

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           AP+ Y + L+  GF+R F+I   FR+E   PR +    EF  ++   ++ +   +++  E
Sbjct: 239 APELYLKRLVVGGFERVFEINRNFRNEGVSPRHN---PEFTMMEFYAAYTDYRWMMDFTE 295

Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
            V+R    +     T+         +  F R+    AI++Y  D  D
Sbjct: 296 QVIRQAAVDSLGTATIQYQGRELDLAKPFHRLTIKQAIQKYAPDYSD 342



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 417 RFELFMTGREIANGFSELNDPEDQAARFKKQVDQKDAGDEEAMYFDADYIRALEYGMPPT 476

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 477 GGCGIGIDRLVMLLTDSPTIRDVLLFP 503


>gi|53715094|ref|YP_101086.1| lysyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|81381368|sp|Q64PM9|SYK_BACFR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|52217959|dbj|BAD50552.1| lysyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 575

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 31/222 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F++++D  G  QV    D  C     E+  +V    +     +
Sbjct: 55  VSVAGRMMSRRIMGKASFIELQDSKGRIQVYITRDDICPGEDKEMYNTVFKRLLDLGDFI 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I+G V              G+I + AQK+ +L+ + + PLP+        +   E PE 
Sbjct: 115 GIEGFVFRTQM---------GEISIHAQKLTVLAKSIK-PLPIVKYKDGVTYDSFEDPE- 163

Query: 124 IRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           +R++ R++DL  +   K+I +KR+++ +SMR    ++ ++E  TPIL A +    AR F+
Sbjct: 164 LRYRQRYVDLAVNEGVKDIFIKRSKVYSSMREYFNSKGYMEVETPILQAIAGGAAARPFM 223

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
                     Y +  A + Y + L+  GF+  ++I   FR+E
Sbjct: 224 THHNALDIPLY-MRIASELYLKRLIVGGFEGVYEIGKNFRNE 264



 Score = 45.1 bits (105), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+ ML+ G   ++EV  FP
Sbjct: 460 RALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFP 496


>gi|239637503|ref|ZP_04678477.1| lysyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596948|gb|EEQ79471.1| lysyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 495

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/272 (20%), Positives = 125/272 (45%), Gaps = 21/272 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  ++D     Q+    D      F++ K      ++ ++G++
Sbjct: 61  VAIAGRIMTKRGKGKAGFAHVQDLSEQIQIYVRKDQIGEEQFDLWKHADLGDIVGVEGVM 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--R 134
              +         TG++ + A+   +L+ A   LP    G ++  +  R++ R+LDL   
Sbjct: 121 FKTN---------TGELSVKAKSFTLLTKALRPLPDKFHGLQDIEQ--RYRQRYLDLITN 169

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193
           +D+  +  + R++II  MR  +  + F+E  TP++   +    AR F+        + Y 
Sbjct: 170 QDST-RTFINRSKIIQEMRNYLNQKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLY- 227

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++  
Sbjct: 228 MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYHDIMDLT 286

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           E+++R + +E      V  N   I  + + +R
Sbjct: 287 ESMVRHIAQEVLGSAKVQYNGTEIDLESSWKR 318



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 490


>gi|254166551|ref|ZP_04873405.1| asparaginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596521|ref|YP_003483217.1| asparaginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624161|gb|EDY36722.1| asparaginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534308|gb|ADD08655.1| asparaginyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 430

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 119/285 (41%), Gaps = 32/285 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCI 73
           +G  V L GW++R R  G IIF+ +RD   I Q V       +  F+    V  E  L I
Sbjct: 14  IGKEVALRGWIYRKRRMGKIIFVVLRDSSDIIQCVIEKKKIGNEKFKELDKVGVESSLEI 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           +G++             TG  E+  + I I+  +   P+     ++  +      R L L
Sbjct: 74  NGVIRKEERAP------TG-YEVDVKDINIIGPSYLFPIT----KDKSDEFLLDNRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R   ++  +  R  +  ++        + E   PI    + EG           + ++  
Sbjct: 123 RSREMNAILKIRHTVFGAIHEFFRENGYYEVQGPIFVTGAVEGGSTLFEVPYFGKKAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  + S  +R + IAP FR E  R+ R   E++  + E+++   +D++   
Sbjct: 181 LSQSAQFYLETFIFS-LERVYTIAPSFRAEKSRTRRHLTEYWHAEGEVAWYHNEDMMRDE 239

Query: 254 E----NVLRGVFEE------FSNGN-----TVSNNFLRICYDDAI 283
           E    ++++ V EE      F N +      +   F+R+ Y++ I
Sbjct: 240 EELIMHIVQKVLEEREKELKFLNRDLEILKNLEKPFIRMKYEELI 284


>gi|237726471|ref|ZP_04556952.1| lysyl-tRNA synthetase [Bacteroides sp. D4]
 gi|229434997|gb|EEO45074.1| lysyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
          Length = 576

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 13/213 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V  +G +   R  G   F++++D  G  QV    D  C +  K + +     +  L    
Sbjct: 55  VSAAGRMMSRRVMGKASFIELQDSKGRIQVYITRDDICPDENKELYNTVFKRLLDLGDFV 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             E        G+I + A+K+ +LS + + PLP+        + + E PE +R++ R++D
Sbjct: 115 GIEGFVFRTQMGEISIHAKKLTVLSKSIK-PLPIVKYKDGVAYDKFEDPE-LRYRQRYVD 172

Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   K+I +KR+++ +SMR    ++ ++E  TPIL + +    AR F+         
Sbjct: 173 LAVNEEVKDIFIKRSKVFSSMREYFNSKGYMEVETPILQSIAGGAAARPFITHHNALDMP 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            Y +  A + Y + L+  GF+  ++I   FR+E
Sbjct: 233 LY-MRIASELYLKRLIVGGFEGVYEIGKNFRNE 264



 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+ ML+ G   ++EV  FP
Sbjct: 460 RALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFP 496


>gi|253576832|ref|ZP_04854157.1| lysyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843699|gb|EES71722.1| lysyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 502

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 123/272 (45%), Gaps = 23/272 (8%)

Query: 5   RTHSCGDL-----GVS-----DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH  GD+     G+S     +    V ++G +   R  G   F  ++D  G  Q+    
Sbjct: 41  RTHMAGDILRQYDGLSKEELEEKHVEVTIAGRIMAKRVMGKASFAHLQDLSGKIQIYVRQ 100

Query: 55  DSACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
           DS        V+ +    +D G ++  + E       TG+  +  + +E+LS +   PLP
Sbjct: 101 DSVP-----EVKYQAFSILDLGDIVGVTGEVFKTK--TGETTIKVKDLEVLSKSL-YPLP 152

Query: 114 VFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TA 171
                     +R++ R++DL  +  + +  +KR++II SMR  + +  ++E  TP L   
Sbjct: 153 DKYHGLKDVELRYRQRYVDLIVNPEVQQTFIKRSQIIRSMRRYLDSLGYLEVETPTLHNI 212

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F+          Y +  A + + + L+  G ++ ++I   +R+E   +   P
Sbjct: 213 AGGAAARPFITHHNALDMQLY-MRIAIELHLKRLIVGGLEKVYEIGRVYRNEGISTRHNP 271

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            EF  +++  ++ +  DI+   EN++  + +E
Sbjct: 272 -EFTMIELYEAYADYKDIMALTENLISHIAQE 302



 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 460 RALEYGMPPTGGLGIGVDRLVMLLTDSASIRDVLLFP 496


>gi|242280171|ref|YP_002992300.1| asparaginyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242123065|gb|ACS80761.1| asparaginyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 463

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/309 (19%), Positives = 120/309 (38%), Gaps = 43/309 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L   +  S + + GWV   R + G  FL++ D   +  V         +    + +E   
Sbjct: 10  LNAENAASEILVKGWVRTKRDNKGFSFLEVNDGSCLKNV-----QVIIDHTPEIEAELEK 64

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +S   E + +     + E+  + IE+L  A+    P+  +R   E +R     L
Sbjct: 65  ISTGASVSVLGELVESPGKGQKWEVRGKSIEMLGFADPETFPLQKKRHSDEFLR-TIAHL 123

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
             R +        R+ +  ++      + F    TPI+T S  EGA +    + ++  + 
Sbjct: 124 RPRTNKFGAMFRIRSELSYAIHKYFRDKGFFYVHTPIITGSDCEGAGEMFRVTSLDHAAL 183

Query: 192 YALPQAPQ----------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            ++ +  Q                Q    + A    + +   P FR E   + R   EF+
Sbjct: 184 SSMKKEDQAANDFFGKESHLTVSGQLDAEMYALSLGQVYTFGPTFRAEKSNTPRHAAEFW 243

Query: 236 QLDMEMSFVEQDDILNTMENVLR--------------GVFEEFSNG-------NTVSNNF 274
            ++ E++F + +D ++  E +++               +F +F +        NT+ N+F
Sbjct: 244 MVEPEVAFADLNDNMDLGEEMVKYLINHVLEKCADDIELFAKFVDKTLMDTLRNTLDNDF 303

Query: 275 LRICYDDAI 283
            RI Y+DA+
Sbjct: 304 ERIRYEDAV 312



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G  R    +V+    +  G+  E     +     + + G  PH G   G +R++ML
Sbjct: 386 ELVGGSQREERLDVLESRIAETGMESE----DYWWYLDSRRFGSAPHAGFGMGFERMLML 441

Query: 550 LLGAKNVREVSLFPMS 565
           L G  N+R+V  FP +
Sbjct: 442 LTGVTNIRDVIPFPRT 457


>gi|160944697|ref|ZP_02091924.1| hypothetical protein FAEPRAM212_02211 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443881|gb|EDP20885.1| hypothetical protein FAEPRAM212_02211 [Faecalibacterium prausnitzii
           M21/2]
 gi|295104347|emb|CBL01891.1| Lysyl-tRNA synthetase (class II) [Faecalibacterium prausnitzii
           SL3/3]
          Length = 503

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 17/249 (6%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +D G  V L+G +   R  G   F  +RD  G  Q+    D    E   + +   V    
Sbjct: 61  TDSGKLVALAGRMMSKRVMGKASFAHLRDDKGDIQLYVRRDELGDEAYAAFKKLDV---- 116

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL 133
           G ++    E       TG  ELS +  E+  +A+ L PLP          +R++ R++DL
Sbjct: 117 GDIIGVKGEVFRTK--TG--ELSVRATELTLLAKSLRPLPEKFHGLTDTEMRYRQRYVDL 172

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   K+  +KR+RI+  +R  +  + F+E  TPILT       AR F           
Sbjct: 173 IANPEVKDTFIKRSRILKEIRAYLDEKGFLEVDTPILTPFEIGASARPFYTHHNTLNMDM 232

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDI 249
             L    + Y + L+  G DR +++   FR+E  DP+ +    EF  +++  +F +   +
Sbjct: 233 -VLRIETELYLKRLIVGGMDRVYEVGRIFRNEGMDPKHN---PEFTTIELYQAFTDFHGM 288

Query: 250 LNTMENVLR 258
           ++ +E + +
Sbjct: 289 MDLVEELYK 297



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 461 ALEYGLPPTGGLGFGVDRLVMLLTDSASIRDVLLFP 496


>gi|319952351|ref|YP_004163618.1| lysyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421011|gb|ADV48120.1| Lysyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 563

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 19/256 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--LCIDG 75
           G  V ++G + R +  G   F  ++D  G  Q+  N D  C E   S  +E    L   G
Sbjct: 46  GKKVIVAGRLMRKKIQGKASFAALQDSEGRVQLYFNRDEICTEDDHSKYNEIFKKLTDLG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP-------VFGEREYPESIRFK 127
            ++    E     +  G+  +  +   IL  A   LPLP       V  E   PE +R++
Sbjct: 106 DIIGVEGELFTTQV--GEKTVLVKDFTILCKALRPLPLPKVDPDGKVHDEFNDPE-LRYR 162

Query: 128 YRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPS 184
            R++DL  + ++ +  +KRT+I NS+R       ++E  TPIL    P G  AR FL   
Sbjct: 163 QRYVDLIVNPSVKQTFIKRTKITNSIRQFFNDREYLEVETPIL-QPIPGGASARPFLTHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ 
Sbjct: 222 NALNIPLY-LRVANELYLKRLIVGGFDGVYEFSKDFRNEGMDRTHNP-EFTVMELYVAYK 279

Query: 245 EQDDILNTMENVLRGV 260
           + + +++  E +L  V
Sbjct: 280 DYNWMMDMTEQLLEKV 295



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  GI  GIDR+VML+    +++EV  FP
Sbjct: 455 RALEYGMPPTAGIGIGIDRLVMLMTNNSSIQEVLFFP 491


>gi|218782114|ref|YP_002433432.1| asparaginyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218763498|gb|ACL05964.1| Asparaginyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 464

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/348 (21%), Positives = 131/348 (37%), Gaps = 55/348 (15%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GWV  VR   G  FL+I D   +   QV+A      +E A S+ +   + + G + 
Sbjct: 29  VLVKGWVRTVRDQKGFAFLEINDGSCLKNLQVIAEGGEGPYETAVSLTTGCSVQVSGRLA 88

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           +   +  +  +  G+I L      I    E  PL     ++   S  F      LR  T 
Sbjct: 89  ASPGKGQDWELKAGEILL------IGDCPESFPL-----QKKRHSDEFLRTIAHLRPRTN 137

Query: 139 HKNIVKRTRIINSMRCR--MIAENFIECSTPILTASSPEGARDFLVPSRVNQGS------ 190
               + R R   ++          F+   TPI+T S  EGA +    +   +G       
Sbjct: 138 KFGALFRIRSSMALAVHNFFADRGFVYIQTPIITGSDCEGAGEMFTLTTQAKGETLAPEK 197

Query: 191 -FYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+  P       Q +  + A      +   P FR E+  + R   EF+ ++ E +F + 
Sbjct: 198 DFFGKPAYLTVSGQLEAEMYALALGAVYTFGPTFRAENSNTSRHAAEFWMIEPEAAFADL 257

Query: 247 DDILNTMENVLR--------------GVFEEFSN-------GNTVSNNFLRICYDDAIRR 285
           +D +   E ++R               +F  F +        N ++N+F+R+ Y +A+  
Sbjct: 258 NDNMALGEELVRHLASHALEKCSQDVDLFARFVDKTLSQTLDNIINNDFVRMTYTEAVEA 317

Query: 286 Y-GTDKPDLRNPIIMHN--------VTEHFVHSEFRVFSKILSVNPGY 324
              +D+     P+   +        +TE +      V+    S+ P Y
Sbjct: 318 LQKSDRKFQYQPMWGKDLQTEHERYITEEYCKKPVIVYDYPASIKPFY 365



 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 4/76 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    +++      +G+S+E     +     + + G  PH G   G +R++M+
Sbjct: 387 EIIGGSQREERLDMLQARIKEMGLSEE----EYWWYLDSRRFGTAPHSGFGMGFERVLMM 442

Query: 550 LLGAKNVREVSLFPMS 565
           + G  N+R+V  FP +
Sbjct: 443 VTGVSNIRDVIPFPRT 458


>gi|330828581|ref|YP_004391533.1| Lysyl-tRNA synthetase, heat inducible [Aeromonas veronii B565]
 gi|328803717|gb|AEB48916.1| Lysyl-tRNA synthetase, heat inducible [Aeromonas veronii B565]
          Length = 511

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 20/257 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---- 69
           ++ +G  V+++G +   R  G   F  ++D  G  QV    D            +W    
Sbjct: 62  LTSLGKRVKIAGRIMTRRIMGKASFATLQDMAGKIQVYVTRDDLPEGFYNEQFKKWDLGD 121

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           ++ ++G +             TG++ +    I +L+ A   PLP   +    +  R + R
Sbjct: 122 IVGVEGTLFKTQ---------TGELSVHVSDIRLLTKALR-PLPEKHKGLTDQEARCRQR 171

Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186
           +LDL   +   K  + RT+++  +R     + F+E  TP++    P GA  R F+     
Sbjct: 172 YLDLIANEESRKTFMIRTQVVAGIRKFFNEKRFMEVETPMMQVI-PGGASARPFVTHHNA 230

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  AP+ Y + L+  GF+R ++I   FR+E   S R   EF  ++  M++ + 
Sbjct: 231 LDIDMY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGI-SVRHNPEFTMIEFYMAYADY 288

Query: 247 DDILNTMENVLRGVFEE 263
            D+++  E +LR + ++
Sbjct: 289 IDLMDLTEELLRTLAQD 305



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++    G E+A+G    + +E   + F +    KE  ++           A + G+PP 
Sbjct: 419 RFEFFIGGRELANGFSELNDAEDQAKRFQDQVDQKEAGDDEAMFYDADFVTALEHGLPPT 478

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML   +  +R+V LFP
Sbjct: 479 AGQGIGIDRLVMLFTNSHTIRDVILFP 505


>gi|256844418|ref|ZP_05549904.1| lysyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256849194|ref|ZP_05554627.1| lysyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262047210|ref|ZP_06020168.1| lysyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|256613496|gb|EEU18699.1| lysyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256713970|gb|EEU28958.1| lysyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260572455|gb|EEX29017.1| lysyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 511

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 21/258 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      ++I K       L I+G V
Sbjct: 56  TKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIEGEV 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RR 135
           M            TG++ + A  +  LS A   LP    G ++  E+I ++ R+LDL   
Sbjct: 116 MKTD---------TGELTIRALHVTFLSKALRPLPDKYHGLKDV-EAI-YRQRYLDLITN 164

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
              +   V RT+II ++R  +  +NF+E  TP+L  + P G  AR F+        + Y 
Sbjct: 165 HDSYMRFVHRTQIIQAIRDYLNGQNFLEVETPVL-HNIPGGAEARPFITHHNALDINLYM 223

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                   K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  
Sbjct: 224 RIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDYHDVMDEA 281

Query: 254 ENVLRGVFEEFSNGNTVS 271
           E ++R   +  S+   ++
Sbjct: 282 EGIIRAAAKVVSDDGKIT 299



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 449 RAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 485


>gi|255691388|ref|ZP_05415063.1| lysine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260623032|gb|EEX45903.1| lysine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 576

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 41/292 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F++++D  G  QV    D  C     E+  +V    +     +
Sbjct: 55  VSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPGEDKELYNAVFKRLLDLGDFI 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I+G V              G+I + A+K+ +L+ + + PLP+        +   E PE 
Sbjct: 115 GIEGFVFRTQM---------GEISIHAKKLTVLAKSIK-PLPIVKYKDGVAYDSFEDPE- 163

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           +R++ R++DL   D + +  +KR  ++ ++R  +    + E  TPIL + +    AR F+
Sbjct: 164 LRYRQRYVDLVVNDGIKETFLKRATVVKTLRNVLDEAGYTEVETPILQSIAGGASARPFI 223

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ +
Sbjct: 224 THHNSLDIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP-EFTCMELYV 281

Query: 242 SFVEQDDILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
            + + + ++N  E +L        G  E   +G T+S    + R+   DAI+
Sbjct: 282 QYKDYNWMMNFTEKLLERICIAVNGCTESVVDGKTISFKAPYRRLPILDAIK 333



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP
Sbjct: 461 RALQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFP 497


>gi|160885236|ref|ZP_02066239.1| hypothetical protein BACOVA_03235 [Bacteroides ovatus ATCC 8483]
 gi|237714790|ref|ZP_04545271.1| lysyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262406935|ref|ZP_06083484.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294644119|ref|ZP_06721895.1| lysine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294805685|ref|ZP_06764565.1| lysine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|156109586|gb|EDO11331.1| hypothetical protein BACOVA_03235 [Bacteroides ovatus ATCC 8483]
 gi|229445115|gb|EEO50906.1| lysyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262355638|gb|EEZ04729.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292640538|gb|EFF58780.1| lysine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294447101|gb|EFG15688.1| lysine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 575

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 41/292 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F++++D  G  QV    D  C     E+  +V    +     +
Sbjct: 55  VSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPGEDKELYNAVFKRLLDLGDFI 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I+G V              G+I + A+K+ +L+ + + PLP+        +   E PE 
Sbjct: 115 GIEGFVFRTQM---------GEISIHAKKLTVLAKSIK-PLPIVKYKDGVAYDSFEDPE- 163

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           +R++ R++DL   D + +  +KR  ++ ++R  +    + E  TPIL + +    AR F+
Sbjct: 164 LRYRQRYVDLVVNDGIKETFLKRATVVKTLRNVLDEAGYTEVETPILQSIAGGASARPFI 223

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ +
Sbjct: 224 THHNSLDIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP-EFTCMELYV 281

Query: 242 SFVEQDDILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
            + + + ++N  E +L        G  E   +G T+S    + R+   DAI+
Sbjct: 282 QYKDYNWMMNFTEKLLERICIAVNGCTESVVDGKTISFKAPYRRLPILDAIK 333



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP
Sbjct: 461 RALQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFP 497


>gi|293373876|ref|ZP_06620218.1| lysine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292631097|gb|EFF49733.1| lysine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 575

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 41/292 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F++++D  G  QV    D  C     E+  SV    +     +
Sbjct: 55  VSVAGRIMSRRVMGKASFVELQDSKGRIQVYITRDDICPGEDKELYNSVFKRLLDLGDFI 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I+G V              G+I + A+K+ +L+ + + PLP+        +   E PE 
Sbjct: 115 GIEGFVFRTQ---------MGEISIHAKKLTVLAKSIK-PLPIVKYKDGVAYDSFEDPE- 163

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           +R++ R++DL   D + +  +KR  ++ ++R  +    + E  TPIL + +    AR F+
Sbjct: 164 LRYRQRYVDLVVNDGIKETFLKRATVVKTLRNALDEAGYTEVETPILQSIAGGASARPFI 223

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ +
Sbjct: 224 THHNSLDMDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP-EFTCMELYV 281

Query: 242 SFVEQDDILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
            + + + ++N  E +L        G  E   +G T++    + R+   DAI+
Sbjct: 282 QYKDYNWMMNFTEKLLERICIAVNGSTETVVDGKTINFKAPYRRLPILDAIK 333



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP
Sbjct: 461 RALQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFP 497


>gi|260174123|ref|ZP_05760535.1| lysyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315922390|ref|ZP_07918630.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696265|gb|EFS33100.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 575

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 41/292 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F++++D  G  QV    D  C     E+  SV    +     +
Sbjct: 55  VSVAGRIMSRRVMGKASFVELQDSKGRIQVYITRDDICPGEDKELYNSVFKRLLDLGDFI 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I+G V              G+I + A+K+ +L+ + + PLP+        +   E PE 
Sbjct: 115 GIEGFVFRTQM---------GEISIHAKKLTVLAKSIK-PLPIVKYKDGVAYDSFEDPE- 163

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           +R++ R++DL   D + +  +KR  ++ ++R  +    + E  TPIL + +    AR F+
Sbjct: 164 LRYRQRYVDLVVNDGIKETFLKRATVVKTLRNALDEAGYTEVETPILQSIAGGASARPFI 223

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ +
Sbjct: 224 THHNSLDMDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP-EFTCMELYV 281

Query: 242 SFVEQDDILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
            + + + ++N  E +L        G  E   +G T++    + R+   DAI+
Sbjct: 282 QYKDYNWMMNFTEKLLERICIAVNGSTETVVDGKTINFKAPYRRLPILDAIK 333



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP
Sbjct: 461 RALQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFP 497


>gi|227878375|ref|ZP_03996330.1| lysine--tRNA ligase [Lactobacillus crispatus JV-V01]
 gi|227862054|gb|EEJ69618.1| lysine--tRNA ligase [Lactobacillus crispatus JV-V01]
          Length = 516

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 21/258 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      ++I K       L I+G V
Sbjct: 61  TKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIEGEV 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RR 135
           M            TG++ + A  +  LS A   LP    G ++  E+I ++ R+LDL   
Sbjct: 121 MKTD---------TGELTIRALHVTFLSKALRPLPDKYHGLKDV-EAI-YRQRYLDLITN 169

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
              +   V RT+II ++R  +  +NF+E  TP+L  + P G  AR F+        + Y 
Sbjct: 170 HDSYMRFVHRTQIIQAIRDYLNGQNFLEVETPVL-HNIPGGAEARPFITHHNALDINLYM 228

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                   K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  
Sbjct: 229 RIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDYHDVMDEA 286

Query: 254 ENVLRGVFEEFSNGNTVS 271
           E ++R   +  S+   ++
Sbjct: 287 EGIIRAAAKVVSDDGKIT 304



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 454 RAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 490


>gi|261855043|ref|YP_003262326.1| lysyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261835512|gb|ACX95279.1| lysyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 511

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 19/257 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77
           V ++G V   R  G   FL I DH G  Q+    D+   A ++  K+     ++  +G +
Sbjct: 76  VVVAGRVMAKRLMGKASFLSILDHSGRIQLYVARDALGEATYDDFKTWDIGDIVGGEGAL 135

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRD 136
                         G++ +    I +L+ +   PLP           R++ R++DL   +
Sbjct: 136 FKTQ---------KGELSVRVDSIRLLTKSLR-PLPDKFHGMSDTEQRYRQRYVDLIMNE 185

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYAL 194
            +     KRT+II  MR  + A++F+E  TP++    P G  A+ F           Y L
Sbjct: 186 PVRDTFRKRTQIIQFMRNYLNAKDFLEVETPMMHV-IPGGASAKPFTTFHNALDMDLY-L 243

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+R ++I   FR+E   +   P EF  ++   ++ +  D+++  E
Sbjct: 244 RIAPELYLKRLVVGGFERVYEINRNFRNEGLSTRHNP-EFTMIEFYQAYADYIDLMDMTE 302

Query: 255 NVLRGVFEEFSNGNTVS 271
           ++LR + E      T++
Sbjct: 303 DLLRRLSESVCGSTTLT 319



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EIA+G    + +E   + F      K+  ++    F   Y RA + GMPP 
Sbjct: 420 RFEFFIGGREIANGFSELNDAEDQAERFMAQVAEKDAGDDEAMHFDSDYIRALEHGMPPT 479

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VM L  + ++R+V LFP
Sbjct: 480 AGEGIGIDRLVMFLTDSPSIRDVLLFP 506


>gi|298479807|ref|ZP_06998007.1| lysine--tRNA ligase [Bacteroides sp. D22]
 gi|298274197|gb|EFI15758.1| lysine--tRNA ligase [Bacteroides sp. D22]
          Length = 575

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 41/292 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F++++D  G  QV    D  C     E+  +V    +     +
Sbjct: 55  VSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPGEDKELYNAVFKRLLDLGDFI 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I+G V              G+I + A+K+ +L+ + + PLP+        +   E PE 
Sbjct: 115 GIEGFVFRTQM---------GEISIHAKKLTVLAKSIK-PLPIVKYKDGVAYDSFEDPE- 163

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           +R++ R++DL   D + +  +KR  ++ ++R  +    + E  TPIL + +    AR F+
Sbjct: 164 LRYRQRYVDLVVNDGIKETFLKRATVVKTLRNVLDEAGYTEVETPILQSIAGGASARPFI 223

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ +
Sbjct: 224 THHNSLDIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP-EFTCMELYV 281

Query: 242 SFVEQDDILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
            + + + ++N  E +L        G  E   +G T+S    + R+   DAI+
Sbjct: 282 QYKDYNWMMNFTEKLLERICIAVNGCTESVVDGKTISFKAPYRRLPILDAIK 333



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP
Sbjct: 461 RALQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFP 497


>gi|295692147|ref|YP_003600757.1| lysyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030253|emb|CBL49732.1| Lysyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 515

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 21/258 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      ++I K       L I+G V
Sbjct: 61  TKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIEGEV 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RR 135
           M            TG++ + A  +  LS A   LP    G ++  E+I ++ R+LDL   
Sbjct: 121 MKTD---------TGELTIRALHVTFLSKALRPLPDKYHGLKDV-EAI-YRQRYLDLITN 169

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
              +   V RT+II ++R  +  +NF+E  TP+L  + P G  AR F+        + Y 
Sbjct: 170 HDSYMRFVHRTQIIQAIRDYLNGQNFLEVETPVL-HNIPGGAEARPFITHHNALDINLYM 228

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                   K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  
Sbjct: 229 RIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDYHDVMDEA 286

Query: 254 ENVLRGVFEEFSNGNTVS 271
           E ++R   +  S+   ++
Sbjct: 287 EGIIRAAAKVVSDDGKIT 304



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 454 RAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 490


>gi|206602452|gb|EDZ38933.1| Lysyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 507

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 124/280 (44%), Gaps = 33/280 (11%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLCIDGLV 77
           R++G V  +R  G   F  ++D  G  Q+    D    E    +A+++     L +DG+ 
Sbjct: 69  RIAGRVVLLRRFGKAFFATLQDASGRFQIYVRKDHIGEEPYALLAETLDIGDHLGVDGIF 128

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                        TG+  L A  +  L  +   PLP           R++ R++DL  + 
Sbjct: 129 FRTK---------TGEPTLDASHVTFLGKSVH-PLPEKWHGLTDIEQRYRQRYIDLIVNP 178

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYAL 194
             +++ V+R +I+ S+R  M    F+E  TP++  S P GA  R F+          Y L
Sbjct: 179 DARDVFVRRGKILGSIRRFMEDRGFMEVETPMMHPS-PGGALARPFVTHHNALDVDLY-L 236

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
             AP+ Y + LM  GFD  F+I   FR+E   PR +    EF  ++  M++   +D++  
Sbjct: 237 RIAPELYLKRLMVGGFDLVFEINRNFRNEGFSPRHN---PEFTMMEFYMAYHSPEDLMAL 293

Query: 253 MENVLRGVFEE------FSNGNTV---SNNFLRICYDDAI 283
            E++   +  E      FS G  +   +  + R+ Y DA+
Sbjct: 294 TESLFERLAREIHGESRFSYGEHLLDFAGPYRRLSYFDAL 333



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 16/93 (17%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----------LYRAFQ 530
           +++L   G EIA+G +  +  +  L+ F    +S++  E+R  G            RA +
Sbjct: 416 RFELFVAGVEIANGFMELNDPDEQLRRF----LSQQ--ESRNSGDLEAPPPDMDYIRALE 469

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+PP  G   GIDR+VMLL    ++R+V LFP
Sbjct: 470 IGLPPTAGEGIGIDRLVMLLTNQHSIRDVLLFP 502


>gi|239825660|ref|YP_002948284.1| lysyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239805953|gb|ACS23018.1| lysyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 494

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 133/311 (42%), Gaps = 39/311 (12%)

Query: 5   RTHSC-------GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH         GDL   ++      V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 34  RTHKAKELFDLYGDLSKEELEEKQIKVAVAGRIMTKRGKGKAGFAHIQDVTGQIQIYVRE 93

Query: 55  DSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EEL 110
           D+     +E+ K+     ++ + G V              G++ +     E L+ A   L
Sbjct: 94  DTVGEEQYELFKTSDLGDIIGVYGTVFKTKV---------GELSIKVSSYEFLTKALRPL 144

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL 169
           P    G ++  +  R++ R+LDL  +   KN  + R+RII +MR  + +  ++E  TP++
Sbjct: 145 PEKYHGLKDIEQ--RYRQRYLDLIMNPESKNTFITRSRIIQAMRRYLDSHGYLEVETPMM 202

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            + +    AR F+          Y +  A + + + L+  G ++ ++I   FR+E   + 
Sbjct: 203 HSIAGGAAARPFITHHNALDMPLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTR 261

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICY 279
             P EF  L++  ++ +  DI+   EN++  + +E      +         +  + R+  
Sbjct: 262 HNP-EFTMLELYEAYADFRDIMKLTENLIAHIAQEVLGTTKIQYGEHTVDLTPEWKRLHM 320

Query: 280 DDAIRRY-GTD 289
            DAI+ Y G D
Sbjct: 321 VDAIKEYVGVD 331



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GG+  G+DR+VMLL  + ++R+V LFP  +N
Sbjct: 454 ALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMRN 493


>gi|40063229|gb|AAR38056.1| lysyl-tRNA synthetase [uncultured marine bacterium 577]
          Length = 501

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 16/214 (7%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           +G++ +  + + +L+ +   PLP        +  +++ R+LDL   +   K  + R+RII
Sbjct: 129 SGELTIRVKSLRLLTKSLR-PLPEKFHGLTDQEQKYRQRYLDLISNEDTRKVFLTRSRII 187

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
            S+R       ++E  TP++    P GA  R F+         FY L  AP+ Y + L+ 
Sbjct: 188 QSIRTFFEERGYLEVETPMM-HPIPGGAAARPFITHHNALNMDFY-LRIAPELYLKRLVV 245

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR-------GV 260
           SG ++ F+I   FR+E   +   P EF  L+   ++ +   ++N  E ++R       G 
Sbjct: 246 SGMEKVFEINRSFRNEGISTRHNP-EFTMLEFYEAYQDHIYLMNLTETLIRELAIKVLGT 304

Query: 261 FEEFSNGNTV--SNNFLRICYDDAIRRYGTDKPD 292
            E    G  +  SN FLR+    AI+++  +  D
Sbjct: 305 TEISYQGYKINLSNPFLRLSITQAIQKFHPEHTD 338



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN---RFGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  E     F     +KE  +     + G Y RA + G+PP 
Sbjct: 409 RFELYITGREMANGFSELNDPEDQAARFQEQVRAKESGDKEAMHYDGDYIRALEHGLPPT 468

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR++MLL  + ++R+V LFP
Sbjct: 469 AGEGIGIDRLIMLLTDSPSIRDVILFP 495


>gi|17535927|ref|NP_495453.1| lysyl (K) tRNA Synthetase family member (krs-1) [Caenorhabditis
           elegans]
 gi|2501024|sp|Q22099|SYK_CAEEL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1086773|gb|AAA82396.1| Lysyl (k) trna synthetase protein 1, isoform a [Caenorhabditis
           elegans]
          Length = 572

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 109/244 (44%), Gaps = 10/244 (4%)

Query: 17  VGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V   V ++G +H  R  G  ++F DI       Q++AN      ++      + +   D 
Sbjct: 101 VEEIVSVAGRIHSKRESGSKLVFYDIHGEGTHIQIMANAKFHTGDVDFVTLHDRIKRGDI 160

Query: 76  LVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           +  +  A    A    G++ L   +I ++      LP   FG ++  + +RF+ R+LDL 
Sbjct: 161 VGFTGRATRTKA----GELSLIPNEILQLTPCLHMLPHSHFGLKD--KELRFRKRYLDLI 214

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +  +  N V R++II  +R  +    F+E  TPI+   +        +    +      
Sbjct: 215 LNPRVKDNFVIRSKIITFLRRYLDNLGFLEVETPIMNQIAGGATAKPFITHHNDLDMNLF 274

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y ++L+  G DR +++   FR+E       P EF   +  M++ + +D++   
Sbjct: 275 LRVAPELYHKMLVVGGIDRVYEVGRLFRNEGIDLTHNP-EFTTCEFYMAYADYEDVIQLT 333

Query: 254 ENVL 257
           E++L
Sbjct: 334 EDLL 337



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M+L    N++EV LFP
Sbjct: 516 ALEYGLPPTGGWGMGIDRLSMILTDNNNIKEVLLFP 551


>gi|189463939|ref|ZP_03012724.1| hypothetical protein BACINT_00273 [Bacteroides intestinalis DSM
           17393]
 gi|189438512|gb|EDV07497.1| hypothetical protein BACINT_00273 [Bacteroides intestinalis DSM
           17393]
          Length = 580

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 130/292 (44%), Gaps = 41/292 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F++++D  G  QV    D  C     E+  +V    +     +
Sbjct: 59  VSVAGRMMTRRVMGKASFVELQDSKGRIQVYITRDDICPGEDKELYNTVFKRLLDLGDFI 118

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I+G V              G+I + AQK+ +L+ + + PLP+        +   E PE 
Sbjct: 119 GIEGFVFRTQM---------GEISIHAQKLTVLAKSIK-PLPIVKYKDGVAYDSFEDPE- 167

Query: 124 IRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           +R++ R++DL   D +    +KR  +I +MR  +    + E  TPIL + +    AR F+
Sbjct: 168 LRYRQRYVDLIVNDGVKDTFLKRATVIKTMRAVLDEAGYTEVETPILQSIAGGASARPFI 227

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ +
Sbjct: 228 THHNSLNIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-EFTCMELYV 285

Query: 242 SFVEQDDILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
            + + + +++  E +L        G  E   +G T+S    + R+   DAI+
Sbjct: 286 QYKDYNWMMSFTEKLLERICIAVNGSEETTIDGKTISFKAPYRRLPILDAIK 337



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+ ML+ G   ++EV  FP
Sbjct: 464 RALQFGMPPTSGIGIGIDRLTMLMTGKSYIQEVLFFP 500


>gi|115380061|ref|ZP_01467105.1| lysyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115362936|gb|EAU62127.1| lysyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 477

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 119/273 (43%), Gaps = 21/273 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +  +R  G   F+ +RD  G  QV    D+    +  S  + + LC  G  +  + 
Sbjct: 76  VAGRIVAMRTFGKAAFIKLRDRSGEIQVHMKKDA----LGDSYEA-FKLCDLGDFLGATG 130

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKN 141
                   TG++ LSA K   L+ +   PLP          IR++ R+LDL  +  + + 
Sbjct: 131 PVFRTK--TGELSLSATKFTPLTKSLR-PLPEKWHGLTDVEIRYRQRYLDLVSNPEVKQT 187

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
            +KR +++  +R  + + ++IE  TP++    S   AR F           Y +  AP+ 
Sbjct: 188 FLKRNKLVRFIREFLDSRDYIEVETPMMHPLVSGAAARPFKTHHNALDIELY-MRIAPEL 246

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  G +R ++I   FR+E   +   P EF  L+   ++   +D+++  E ++   
Sbjct: 247 YLKRLVVGGIERVYEINRNFRNEGISTRHNP-EFTMLEFYQAYATYEDLMDLTEQMISEA 305

Query: 261 FEEFSNGNTV---------SNNFLRICYDDAIR 284
            +  +    V            + RI   +AIR
Sbjct: 306 AQAVTGATKVPYQGHELDFGKGWKRIPMTEAIR 338


>gi|237720034|ref|ZP_04550515.1| lysyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|299147908|ref|ZP_07040971.1| lysine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|229450586|gb|EEO56377.1| lysyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|295084792|emb|CBK66315.1| Lysyl-tRNA synthetase (class II) [Bacteroides xylanisolvens XB1A]
 gi|298514091|gb|EFI37977.1| lysine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 575

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 41/292 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F++++D  G  QV    D  C     E+  SV    +     +
Sbjct: 55  VSVAGRIMSRRVMGKASFVELQDSKGRIQVYITRDDICPGEDKELYNSVFKRLLDLGDFI 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I+G V              G+I + A+K+ +L+ + + PLP+        +   E PE 
Sbjct: 115 GIEGFVFRTQM---------GEISIHAKKLTVLAKSIK-PLPIVKYKDGVAYDSFEDPE- 163

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           +R++ R++DL   D + +  +KR  ++ ++R  +    + E  TPIL + +    AR F+
Sbjct: 164 LRYRQRYVDLVVNDGIKETFLKRATVVKTLRNALDEAGYTEVETPILQSIAGGASARPFI 223

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ +
Sbjct: 224 THHNSLDMDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP-EFTCMELYV 281

Query: 242 SFVEQDDILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
            + + + ++N  E +L        G  E   +G T++    + R+   DAI+
Sbjct: 282 QYKDYNWMMNFTEKLLERICIAVNGSTETVVDGKTINFKAPYRRLPILDAIK 333



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP
Sbjct: 461 RALQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFP 497


>gi|289621226|emb|CBI52009.1| unnamed protein product [Sordaria macrospora]
          Length = 566

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 122/296 (41%), Gaps = 50/296 (16%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGIT---QVVANPDSA-----CFEI 61
           ++G   VG  V +  WV   R  G  + F+++R+    T     VAN +         + 
Sbjct: 102 NIGEEHVGKAVIVRAWVQNARIQGAKMAFVELREEGAWTIQGVFVANNEGTPVSKPMVKF 161

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL----------P 111
           A  +  E  + ++G V  +  E + +  ++   EL  +KI +L+ A ++          P
Sbjct: 162 AAGINPESFVVVEGTV-EKPLEPVKSCKVS-NYELHIRKIFVLAAAPQMLGMTLAAANRP 219

Query: 112 LPVFGERE-YPE----------------SIRFKYRFLDLRRDTLHKNIVK-------RTR 147
           +  F + E  PE                SI        L    +HK           R  
Sbjct: 220 ITNFSDEEPAPEKAAEEAVDKLSIAAESSIPAATMLTHLDNIIMHKRAPVQQAIADIRME 279

Query: 148 IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           + +  R  + +  F E   P L  ++ EG  +       ++ +F A  Q+PQ YKQ  +A
Sbjct: 280 VKDLFRSYLKSHGFKEFEPPCLIGAASEGGANVFRMPYFDKEAFLA--QSPQFYKQFEIA 337

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD--DILNTMENVLRGVF 261
            G  + F I P FR E+  + R   EF  LD+EM  +++D  ++L  +E VL  +F
Sbjct: 338 GGRKKVFSIGPVFRAENSNTPRHMTEFTGLDLEME-IKKDYREVLLMLEGVLLHIF 392


>gi|85114715|ref|XP_964741.1| aspartyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|28926534|gb|EAA35505.1| aspartyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|38636451|emb|CAE81986.1| related to aspartate--tRNA ligase [Neurospora crassa]
          Length = 594

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 125/314 (39%), Gaps = 50/314 (15%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ----VVANPDSAC----FEI 61
           ++G   VG  V +  WV   R  G  + F+++R+    T     V +N  +       + 
Sbjct: 108 NIGEEHVGKAVIVRAWVQNARIQGAKMAFVELREEGAWTIQGVFVASNEGTPVSKPMVKF 167

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL----------P 111
           A  +  E  + ++G V  +  E + +  ++   EL  +KI +L+ A ++          P
Sbjct: 168 AAGINPESFVVVEGTV-QKPLEPVKSCKVS-NYELHIRKIFVLAAAPQMLGMTLAAANRP 225

Query: 112 LPVFGERE-YPE----------------SIRFKYRFLDLRRDTLHKNIVK-------RTR 147
           +  F + E  PE                SI        L    +HK           R  
Sbjct: 226 ITNFSDEEPAPEKAAEDGVDKLSIAAESSIPAATMLTHLDNIIMHKRAPVQQAIADIRME 285

Query: 148 IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           + +  R  + +  F E   P L  ++ EG  +       ++ +F A  Q+PQ YKQ  +A
Sbjct: 286 VKDLFRSYLKSHGFKEFEPPCLIGAASEGGANVFRMPYFDKEAFLA--QSPQFYKQFEIA 343

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD--DILNTMENVLRGVFEEFS 265
            G  R F I P FR E+  + R   EF  LD+EM  +++D  ++L  +E VL  +F    
Sbjct: 344 GGRKRVFSIGPVFRAENSNTPRHMTEFTGLDLEME-IKKDYREVLLMLEGVLLHIFRGIK 402

Query: 266 NGNTVSNNFLRICY 279
                    +R  Y
Sbjct: 403 ERCAAEIELVRSVY 416



 Score = 37.0 bits (84), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 3/85 (3%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS-KEVVENRFGGLYRAFQCGMPPHGGIA 540
           +D    G EI SGG R +  E +       G+  K      +  ++R  Q G+P HGG  
Sbjct: 506 FDFFLRGQEILSGGQRINDPEELEARIIQKGVDPKSAGIKDYVDVFR--QAGVPAHGGGG 563

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G+DR+V   L   +V   + +P +
Sbjct: 564 IGLDRVVAWFLNLPSVHLAAYYPRT 588


>gi|18252211|gb|AAL61938.1| aspartate--tRNA ligase - like protein [Arabidopsis thaliana]
 gi|27311923|gb|AAO00927.1| aspartate--tRNA ligase - like protein [Arabidopsis thaliana]
          Length = 405

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H+ EV+ Q     GI  + +         +F+ G P HGG   
Sbjct: 320 FDVFIRGEEIISGAQRVHIPEVLEQRAGECGIDVKTISTYID----SFRYGAPLHGGFGV 375

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML     N+R+ SLFP
Sbjct: 376 GLERVVMLFCALNNIRKTSLFP 397



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 5/142 (3%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R  YR LDLR          +  +  + R ++  +NF+   TP L A S EG     
Sbjct: 80  QDTRLNYRVLDLRTPANQAIFQLQYEVEYAFREKLRFKNFVGIHTPKLMAGSSEGGSAVF 139

Query: 182 VPSRVN-QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              R+  +G    L Q+PQ +KQ+ +     R F++ P FR ED  + R   EF  LD+E
Sbjct: 140 ---RLEYKGQPACLAQSPQLHKQMAICGDLRRVFEVGPVFRAEDSFTHRHLCEFVGLDVE 196

Query: 241 MSFVEQ-DDILNTMENVLRGVF 261
           M   +   +I++ ++ +   +F
Sbjct: 197 MEIRKHYSEIMDLVDELFVFIF 218


>gi|325280339|ref|YP_004252881.1| Lysyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324312148|gb|ADY32701.1| Lysyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 573

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 135/288 (46%), Gaps = 29/288 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAKSVRSEWVLCID-GLVM 78
           V ++G +   R  G   F +++D  G  QV V+  D +  E + +  + +   +D G ++
Sbjct: 55  VVIAGRMMSRRIMGKASFFELQDATGRIQVYVSRDDISTDEASTAYNTVFKKLMDIGDIV 114

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYRF 130
                       TG+I + A+++ +LS +   PLP+  E+E         PE  R++ R+
Sbjct: 115 GVKGFVFRTQ--TGEISVHAKELTMLSKSLR-PLPIVKEKEGKVFDAFTDPEQ-RYRQRY 170

Query: 131 LDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVN 187
           LDL  +   K + VKRTR+IN++R    ++ ++E  TP+L A  P G  AR F+      
Sbjct: 171 LDLIVNPQVKEVFVKRTRMINAIRNFFNSKGYLEVETPVLQA-IPGGASARPFITHHNAL 229

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-- 245
               Y L  A + Y + L+  GF+  ++ +  FR+E       P EF  +++ +++ +  
Sbjct: 230 DIPLY-LRIANELYLKRLIVGGFEGVYEFSRNFRNEGMDRTHNP-EFTCMEIYVAYKDYL 287

Query: 246 -----QDDILNTMENVLRGVFEEFSNGNTV--SNNFLRICYDDAIRRY 286
                 ++++ T    + G  +     N +     F R+   DAI+ Y
Sbjct: 288 WMMNFTEEMIETAALAINGTTKAVIGENEIDFKRPFRRVRMADAIKEY 335



 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  GIDR+ M L  + ++++V  FP
Sbjct: 460 RALEYGMPPTSGMGIGIDRLCMFLTNSASIQDVLFFP 496


>gi|308272633|emb|CBX29237.1| Lysyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 498

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 17/182 (9%)

Query: 125 RFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           R++ R+LDL  +   ++I VKR++II  +R   +  ++IE  TP++    P GA     P
Sbjct: 156 RYRQRYLDLIMNQNVRDIFVKRSQIIRKIRNYFLERDYIEAETPMM-QQIPGGAE--ATP 212

Query: 184 SRVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            + +  +      L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  L+  
Sbjct: 213 FKTHHNALGIDLFLRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTHHNP-EFTMLEFY 271

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS-------NGNTV--SNNFLRICYDDAIRRYGTDKP 291
            ++    D+++  EN+   +  E +        GN++  S  + RI   +A+  +G   P
Sbjct: 272 EAYATYQDLMDLTENLFSKLSLEITGSTSIVYQGNSIDFSGKWKRISLLNALEEFGGVDP 331

Query: 292 DL 293
            L
Sbjct: 332 SL 333



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G   GIDR+ ML   + ++REV LFP
Sbjct: 453 ALEYGMPPTAGEGIGIDRLTMLFTDSASIREVILFP 488


>gi|183221108|ref|YP_001839104.1| asparaginyl-tRNA synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911199|ref|YP_001962754.1| asparaginyl-tRNa synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167775875|gb|ABZ94176.1| Asparagine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779530|gb|ABZ97828.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase; AsnRS)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 434

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 9/239 (3%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           L GWV  +R +  + FL +R +  I QVV   +S   ++ K ++S   L  +  +     
Sbjct: 21  LKGWVQGLRGNNHVQFLQLRTNGKILQVVCEKESLGEDLFKQIKS---LPQETSITVTGK 77

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
              NA    G+ EL  +   I+  + + P+     +++       +R L LR        
Sbjct: 78  WQENAKAPGGE-ELVLESFHIVGASSDYPI---TPKDHGPDFLHNHRHLWLRSKRQLAIQ 133

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202
             R+ +  ++R     E +    TPILT S  E A         + G  Y L Q  Q Y 
Sbjct: 134 RVRSELSFAIREFFRNEGYTLIDTPILTGSIGESAGTLFSTEYFDLGQAY-LAQTGQLYL 192

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           +   A    + +   P FR E  ++ R   EF+ L+ E +F+ Q+  L+  E  ++ V 
Sbjct: 193 E-TAAFAHSKVYCFGPTFRAEKSKTKRHLTEFWMLEAETAFLGQEGNLDLQERFVKSVL 250


>gi|90077058|dbj|BAE88209.1| unnamed protein product [Macaca fascicularis]
          Length = 246

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 161 YDMFMRGEEILSGAQRIHDPQLLTERTLHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 216

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 217 GLERVTMLFLGLHNVRQTSMFP 238



 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 28/148 (18%)

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLR 258
           + + + F++ F I P FR ED  + R   EF  LD+EM+F        ++I +TM  + +
Sbjct: 1   MCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFK 60

Query: 259 GVFEEFSNG-NTVSNNF-----------LRICYDDA---IRRYGT---DKPDLRNP---I 297
           G+ E F     TV+  F           LR+ Y +A   +R  G    D+ DL  P   +
Sbjct: 61  GLQERFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLREAGVEMGDEDDLSTPNEKL 120

Query: 298 IMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           + H V E +  ++F +  K  L+V P Y
Sbjct: 121 LGHLVKEKY-DTDFYILDKYPLAVRPFY 147


>gi|326511347|dbj|BAJ87687.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 582

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 123/264 (46%), Gaps = 19/264 (7%)

Query: 5   RTHSCGDL---------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           RTH+  +L         G     + V ++G +   R  G ++F+ IRD  G  Q+    +
Sbjct: 94  RTHTTKELQERYTHLEDGEVCTEAAVSIAGRIVARRAFGKLVFMTIRDDSGTIQLYCEKE 153

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           S   E  + +++ ++   D L  S S +        G++ +     EIL+ +  LPLP  
Sbjct: 154 SLTEEQFEQLKA-FIDVDDILGASGSIKKTEK----GELSVYVNFFEILTKSL-LPLPDK 207

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASS 173
                    R++ R++D+  +    ++ + R+++++ +R  M +  FIE  TP+L  A+ 
Sbjct: 208 YHGLTDVDKRYRQRYIDMIANPEVADVFRTRSKVVSEIRKTMESFGFIEVETPVLQGAAG 267

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+      Q   Y L  A + + + ++  G ++ ++I   FR+E   +   P E
Sbjct: 268 GAEARPFITHHNSLQRDLY-LRIATELHLKRMLVGGLEKVYEIGRIFRNEGISTRHNP-E 325

Query: 234 FYQLDMEMSFVEQDDILNTMENVL 257
           F  ++M  ++ + + ++N  E ++
Sbjct: 326 FTTIEMYEAYSDYESMMNLAEEIV 349



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + + GMPP  G+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 541 SLEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPV 577


>gi|254480911|ref|ZP_05094157.1| asparaginyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214038706|gb|EEB79367.1| asparaginyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 465

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 128/328 (39%), Gaps = 55/328 (16%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRD--HYGITQVVANPDSA 57
           M  + T      G   VGS V + GW+   R    GI FL + D   +   Q V   D  
Sbjct: 1   MSEFTTVVAALKGELAVGSQVMVKGWLRSKRDSKAGISFLAVHDGTAFDAIQAVVPSDLD 60

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG 116
            +E      SE +    G  +    E + +      +E+ A ++E++  V +    P+  
Sbjct: 61  NYE------SEVLKLSTGCAVVVCGELVESQGKGQSVEIQATEVEVVGWVDDAETYPIAK 114

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           +R   E +R +   L  R +T       RT + N++       +F   +TPILT S  EG
Sbjct: 115 KRHTFEYLRTQAH-LRPRTNTFGAITRVRTTLANAIHNYFHDNDFNWINTPILTGSDCEG 173

Query: 177 ARDFLVPSRVNQGSFYALPQAPQ----------QYKQLLMASG----------FDRYFQI 216
           A +     RV+   F  LP   +            +  L  SG            + +  
Sbjct: 174 AGELF---RVSTLDFANLPLDGKGGVNFEEDFFAGESFLTVSGQLEVESYCLAMSKVYTF 230

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF----EEFSNG----- 267
            P FR E+  + R   EF+ ++ E++F + +D  +  E++L+ VF    EE  +      
Sbjct: 231 GPTFRAENSNTSRHLAEFWMVEPEIAFADLNDDADLAESLLKHVFTRILEEREDDMAFFQ 290

Query: 268 ------------NTVSNNFLRICYDDAI 283
                         + NNF R+ Y +AI
Sbjct: 291 QRIDKTVIDRLRAVIDNNFERMDYSEAI 318


>gi|147903525|ref|NP_001080633.1| lysyl-tRNA synthetase [Xenopus laevis]
 gi|28838485|gb|AAH47965.1| Krs-1-prov protein [Xenopus laevis]
          Length = 605

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 117/264 (44%), Gaps = 24/264 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWV 70
           +   V ++G +H  R  G  +IF D+R      QV+AN      +     I   +R   +
Sbjct: 134 LSEIVSVAGRIHAKRISGAKLIFYDLRGEGTKLQVMANSRFYKSEEEFTAINNKLRRGDL 193

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYR 129
           + + G                G++ +   ++ +LS     LP   FG ++  +  R++ R
Sbjct: 194 IGVKG---------NPGKTKKGELSILPHEMTLLSPCLHMLPHLHFGLKD--KETRYRQR 242

Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186
           +LDL   D + +  + R ++I  +R  +    F+E  TP++    P GA  + F+     
Sbjct: 243 YLDLILNDYVRQKFIVRAKLITYLRKFLDNLGFLEIETPMMNII-PGGAVAKPFITYHND 301

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + 
Sbjct: 302 LDMKLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADY 359

Query: 247 DDILNTMENVLRGVFEEFSNGNTV 270
           +D++   E +L G+ +  + G  V
Sbjct: 360 NDLMEITEKLLSGMVKHITGGYKV 383



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 548 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 583


>gi|295102174|emb|CBK99719.1| Lysyl-tRNA synthetase (class II) [Faecalibacterium prausnitzii
           L2-6]
          Length = 503

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 17/249 (6%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +D G  V L+G +   R  G   F  +RD  G  Q+    D    E+     + +     
Sbjct: 61  TDSGKKVALAGRLMSKRVMGKASFAHLRDDKGDIQLYVRRD----ELGDDAYAAFKKLDV 116

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL 133
           G ++    E       TG  ELSA+  EI  +A+ L PLP          +R++ R++DL
Sbjct: 117 GDIIGVKGEVFRTK--TG--ELSARAEEITLLAKSLRPLPEKFHGLTDTEMRYRQRYVDL 172

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
                + +  VKR++I+  +R  +  + F+E  TPILT       AR F           
Sbjct: 173 IANPEVKETFVKRSKILKEIRAYLDEKGFLEVDTPILTPFEIGASARPFYTHHNTLNMDM 232

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDI 249
             L    + Y + L+  G DR +++   FR+E  DP+ +    EF  +++  +F +   +
Sbjct: 233 -VLRIETELYLKRLIVGGMDRVYEVGRIFRNEGMDPKHN---PEFTTIELYQAFTDFHGM 288

Query: 250 LNTMENVLR 258
           ++ +E + +
Sbjct: 289 MDLVEELYK 297



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 461 ALEYGLPPTGGLGFGVDRLVMLLTDSASIRDVLLFP 496


>gi|257439880|ref|ZP_05615635.1| aspartyl-tRNA synthetase [Faecalibacterium prausnitzii A2-165]
 gi|257197693|gb|EEU95977.1| aspartyl-tRNA synthetase [Faecalibacterium prausnitzii A2-165]
          Length = 264

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 5/71 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+  G EI +G  R H  EV+ +     G++++V   +F      FQ G PPHGG   
Sbjct: 181 YDLIWRGVEITTGAQREHRYEVLKKQAEEKGLAEDV---KF--YLEFFQYGCPPHGGFGL 235

Query: 542 GIDRIVMLLLG 552
           GIDR+ MLL+G
Sbjct: 236 GIDRLTMLLVG 246



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNT 252
           L Q+PQ YKQ+ MA+GF+R F+  P FR E   +++   EF   D+E S++    D++  
Sbjct: 13  LAQSPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHATEFSGFDLEFSYITSYKDVMAM 72

Query: 253 MENVLRG 259
            E +L+ 
Sbjct: 73  EEQLLKA 79


>gi|300812103|ref|ZP_07092551.1| lysine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496942|gb|EFK32016.1| lysine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 507

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 116/258 (44%), Gaps = 21/258 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      ++I K       L ++G V
Sbjct: 60  TKIAGRMLAKRGKGKVGFADLYDRSGKIQIYVRKDMVGEENYQIFKKADLGDFLGVEGEV 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RR 135
                        +G++ + AQ +  LS A   LP    G ++  ESI ++ R+LDL   
Sbjct: 120 FKTD---------SGELSVRAQHVTFLSKALRPLPDKYHGLKDV-ESI-YRQRYLDLITN 168

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
              ++  V RT+II ++R  +  ++F+E  TP+L  + P G  AR F+        + Y 
Sbjct: 169 HESYQRFVNRTKIIQAIRDYLNGQDFLEVETPVLH-NIPGGAEARPFITHHNALDINLYM 227

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                   K+L++    +R ++I   FR+E       P EF +L+   ++ +  D+++  
Sbjct: 228 RIALELPLKRLIVGD-MERVYEIGRVFRNEGMDLKHNP-EFTELETYAAYYDFHDVMDEA 285

Query: 254 ENVLRGVFEEFSNGNTVS 271
           E ++R   +  S    ++
Sbjct: 286 EGIIRAAAKVVSEDGKIN 303



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 453 RAMEYGMPPTGGLGIGIDRLVMLLTNAASIRDVLLFP 489


>gi|225181740|ref|ZP_03735179.1| lysyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167611|gb|EEG76423.1| lysyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 487

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 123/260 (47%), Gaps = 14/260 (5%)

Query: 6   THSCGD-LGVSDV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   D +G  D   G  V L+G +  VR HG   F +++D  G  Q+    D    ++ 
Sbjct: 34  THYAADVIGRFDELDGQSVTLAGRLMTVRAHGKASFANLQDESGQIQIYVRLD----DVG 89

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +     + L   G ++  + +        G++ ++ +++++L+ +   PLP         
Sbjct: 90  QRTYDVFELLDIGDIVGLTGDVFRTR--RGEVTVAVKELQLLAKSLR-PLPEKWHGLTNV 146

Query: 123 SIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
            +R++ R+LD+  +  + K  V R++I+  +R  + ++ F+E  TP++ T +    A+ F
Sbjct: 147 DMRYRQRYLDMIVNPDVKKTFVLRSKIVQEIRNFLNSDGFLEVETPVMHTLAGGASAKPF 206

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +        + Y L  A + + + L+  G D+ +++   FR+E   +   P EF  +++ 
Sbjct: 207 ITHHNALDMNLY-LRIATELHLKRLVVGGMDKVYELGRIFRNEGISTKHNP-EFTSVEIY 264

Query: 241 MSFVEQDDILNTMENVLRGV 260
            +  + +D++   E ++  V
Sbjct: 265 QAQADYEDMMTLTEELITTV 284



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + GMPP GG+  GIDR++M+L  + ++R+V LFP
Sbjct: 446 SLEYGMPPTGGLGIGIDRLIMMLTDSPSIRDVILFP 481


>gi|170288919|ref|YP_001739157.1| lysyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|238688842|sp|B1LAX6|SYK_THESQ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|170176422|gb|ACB09474.1| lysyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 502

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 21/261 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-- 60
           +Y     G++  S+  SF   +G V  +R HG   F  ++D  G  Q     DS   E  
Sbjct: 40  KYDYLQAGEVLESEKLSF---AGRVMSIRHHGKTAFFHMKDDTGRIQAYVRADSVGKEKM 96

Query: 61  --IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
               + V+    + + G               TG++ +  Q+  +LS A   PLP     
Sbjct: 97  DLFKRHVKIGDFIGVRGFPFKSK---------TGELTIYVQEYTLLSKALR-PLPEKWHG 146

Query: 119 EYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + I ++ R+L+L   D   +   KR + +  +R  + +  FIE  TPIL   +    
Sbjct: 147 IKDKEIIYRQRYLELIVSDEAIERFRKRFKAVQVIREFLNSRGFIEVETPILHYVTGGAE 206

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+    V     Y L  AP+ Y + L+  GF++ ++I   FR+E       P EF  
Sbjct: 207 ARPFVTHLNVFDIDMY-LRIAPELYLKRLIIGGFEKIYEIGKNFRNEGISYKHSP-EFTS 264

Query: 237 LDMEMSFVEQDDILNTMENVL 257
           +++  ++ + +D+++  E ++
Sbjct: 265 IEIYQAYADYNDMMDLTEELI 285



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 26/40 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           RA + GMPP GG+  G+DR+ M +  +  +R+V  FP+ +
Sbjct: 446 RALEYGMPPTGGLGIGLDRLFMFITDSPTIRDVIPFPIVK 485


>gi|73984265|ref|XP_856761.1| PREDICTED: similar to Aspartyl-tRNA synthetase (Aspartate--tRNA
           ligase) (AspRS) isoform 3 [Canis familiaris]
          Length = 382

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  +++ +   + GI  E ++        +F+ G PPH G   
Sbjct: 297 YDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIK----AYIDSFRFGAPPHAGGGI 352

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 353 GLERVTMLFLGLHNVRQTSMFP 374



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 26/152 (17%)

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-----DDILNTM 253
           QQ KQ+ + + F++ F I P FR ED  + R   EF  LD+EM+F        ++I +T+
Sbjct: 132 QQDKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVVEEIADTL 191

Query: 254 ENVLRGVFEEFSNG-NTVSNNF-----------LRICYDDA---IRRYGT---DKPDLRN 295
             + +G+ + F     TV+  F           LR+ Y +A   +R  G    D+ DL  
Sbjct: 192 VQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLREAGIEMGDEEDLST 251

Query: 296 P--IIMHNVTEHFVHSEFRVFSKI-LSVNPGY 324
           P   ++  + +    ++F +  K  L+V P Y
Sbjct: 252 PNEKLLGRLVKEKYDTDFYILDKYPLAVRPFY 283


>gi|268562070|ref|XP_002646595.1| C. briggsae CBR-NRS-1 protein [Caenorhabditis briggsae]
          Length = 551

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 105/239 (43%), Gaps = 10/239 (4%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-AKSVRSEWVLCIDGLVM 78
           V +  WVHR+R  G  ++FL +RD YG  Q V N D  C    A ++ +E  + + G++ 
Sbjct: 130 VTIKAWVHRLRRQGKSLMFLILRDGYGFLQCVLN-DKLCQSYDAVTLSTESSVQVYGVIR 188

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           +      N        EL+    E++  +    +     ++    +    R L +R +  
Sbjct: 189 A----VPNGKDAPDGHELTVDYWELIGGSPAGGIDNVLNKDAGVDVMLDNRHLVIRGENA 244

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
            + +  R     +MR    A ++ E + P L  +  EG           + ++  L Q+ 
Sbjct: 245 SRILRIRAAATRAMRDHFFAASYTEVAPPTLVQTQVEGGSTLFGLDYYGEPAY--LTQSS 302

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           Q Y +   A+  D Y  IA  +R E  R+ R   E+  ++ E +F+  D +++ +E+++
Sbjct: 303 QLYLETCNAALGDVYC-IAQSYRAEKSRTRRHLSEYQHVEAECAFITFDQLMDRIESLV 360



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G +R    + ML AF   G+S     N F  + +  + G  PHGG   
Sbjct: 466 DLLMPGVGEIVGGSMRIWKEDEMLAAFERAGLSPT---NYFWYMDQR-KYGSVPHGGYGL 521

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R +  L G  ++R+V L+P
Sbjct: 522 GLERFICWLTGTNHIRDVCLYP 543


>gi|254785321|ref|YP_003072750.1| lysine--tRNA ligase [Teredinibacter turnerae T7901]
 gi|259511535|sp|C5BRM0|SYK_TERTT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|237687139|gb|ACR14403.1| lysine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 498

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 122/251 (48%), Gaps = 22/251 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            + +    V ++G V  +R  G   F+ ++D  G  Q+    ++  F  AKS+    ++ 
Sbjct: 59  ALEEAAMVVSVAGRV--IRNRGA--FMVLQDGSGQIQLYVTKEARGF--AKSLDLGDIIG 112

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+ +S +        G + ++  + ++L+ A   PLP        + +R++ R++D
Sbjct: 113 VSG-VLHKSGK--------GDLYVNLDEYKLLTKALR-PLPDKYHGLADQELRYRQRYVD 162

Query: 133 LRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQG 189
           L  +  + K  + R+RI+  +R  +    F+E  TP+L A  P GA  R F         
Sbjct: 163 LIANPEVRKTFLLRSRIVQFIRDYLNGREFLEVETPMLQAI-PGGATARPFETHHNALDI 221

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GF+R ++I   FR+E   +   P EF  L+   ++ + +D+
Sbjct: 222 DMY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGLSTRHNP-EFTMLEFYQAYADYNDL 279

Query: 250 LNTMENVLRGV 260
           ++  E++LR +
Sbjct: 280 MDLTEDMLRNL 290



 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 11/91 (12%)

Query: 484 LVCNGFEIASGG--IRNHMSEVMLQAFSNVGISKEVVENRFGG---------LYRAFQCG 532
            V + FE   GG  I N  SE+           ++V E   G            RA + G
Sbjct: 403 FVTDRFEFFVGGREIANGFSELNDAEDQADRFKQQVAEKNAGDDEAMHYDADYVRALEYG 462

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +PP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 463 LPPTAGEGIGIDRLVMLLTDSASIRDVLLFP 493


>gi|332993840|gb|AEF03895.1| asparaginyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 465

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 128/319 (40%), Gaps = 62/319 (19%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   VG  V + GWV   R    G+ F+ + D   +   QVVA    + +   + + +  
Sbjct: 12  GKYAVGESVTVKGWVRTRRDSKAGLSFIALHDGSCFDPIQVVALSSLSNYADVQRLTASC 71

Query: 70  VLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRFK 127
            L + G+V +   +        GQ +E+ A ++E+L   E     P+  +R    SI + 
Sbjct: 72  SLSVTGVVKASQGQ--------GQSVEIEATEVEVLGWVENPDTYPMSAKRH---SIEYL 120

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE-----CSTPILTASSPEGARDFLV 182
             +  LR  T   N++     + +   + I   F E      STPILTAS  EGA +   
Sbjct: 121 REYAHLRPRT---NVIGAVTRVRNCLSQAIHRFFHERGHFWVSTPILTASDTEGAGEMFR 177

Query: 183 PSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDP 225
            S ++  +     +    Y +        L  SG            + +   P FR E+ 
Sbjct: 178 VSTLDMMNLPLDDKGNVDYSEDFFGKETYLTVSGQLNVETYCTAMSKVYTFGPTFRAENS 237

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVL----RGVFEEFSNG-------------- 267
            + R   EF+ ++ E++F +  DI    E++L    + V EE  +               
Sbjct: 238 NTSRHLAEFWMIEPEVAFADLSDIAQLAEDMLKYVCKAVLEELPDDMNFFAQRIKKDAVE 297

Query: 268 ---NTVSNNFLRICYDDAI 283
                VS++F+R+ Y DAI
Sbjct: 298 RLEKLVSSDFVRMDYTDAI 316


>gi|260781616|ref|XP_002585901.1| hypothetical protein BRAFLDRAFT_256666 [Branchiostoma floridae]
 gi|229270966|gb|EEN41912.1| hypothetical protein BRAFLDRAFT_256666 [Branchiostoma floridae]
          Length = 423

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/294 (20%), Positives = 127/294 (43%), Gaps = 52/294 (17%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           GWV  +R    ++FL + D   +   QVV  PD      +  +     + ++G +   + 
Sbjct: 1   GWVRSIRAQKDVLFLHLNDGSCLAHLQVVGTPDMG----SSGLSYGSAVAVEGRLFPSAH 56

Query: 83  ETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                    GQ +EL A ++E++        P   ++ +      ++  L  R ++    
Sbjct: 57  --------PGQDVELHADRLEVIGSCNVKEFPFKAKKRHTMEYSRQFPHLRARTNSFSAL 108

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS------FYALP 195
           +  R++  +++      E +IE  TP+++++  EGA + L   +++Q S      F+ +P
Sbjct: 109 LRIRSQAASAIHKFFQDEGYIEVHTPVISSNDCEGAGE-LFQVKISQDSGKDTKHFFDVP 167

Query: 196 ---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILN 251
                  Q +  +MAS   R +   P  + E   S     EFY ++ E++F  +Q+D++ 
Sbjct: 168 AFLTVSGQLQLEVMASALSRVYVFGPTLQQESCLS-----EFYMVEAELAFTQQQEDVME 222

Query: 252 TMENVLRGVFEEF---------------SNG------NTVSNNFLRICYDDAIR 284
            +E +++   E+                S G      N +++ F+R+ Y +AI+
Sbjct: 223 VIEMMVKQPTEQILALCPEDLHLFYKFVSPGHRVIVENILTSRFIRMTYTEAIQ 276



 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 6/100 (6%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +D  ++ AF   LV    E+  G +R    E++      +G+S     N +       + 
Sbjct: 330 DDDKTVAAFDL-LVPEVGELFGGSLREERLEILQDRLDRLGLS-----NSYQWYLDLRRY 383

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G  PHGG   G +R +  +LG  ++R+V  FP   + C +
Sbjct: 384 GSVPHGGFGMGFERYLQCILGVPHIRDVIPFPRFPHSCKM 423


>gi|327312549|ref|YP_004327986.1| asparagine--tRNA ligase [Prevotella denticola F0289]
 gi|326944758|gb|AEA20643.1| asparagine--tRNA ligase [Prevotella denticola F0289]
          Length = 463

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 112/274 (40%), Gaps = 32/274 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  +D G  + + GWV   R    + F+ + D   I   QVV +P     E  
Sbjct: 3   RTKVVDALACTDFGKDINVKGWVRSHRSSKAVDFIALNDGSTIKNIQVVVDPSKMDAEEL 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVA-EELPLPVFGER-E 119
           KS+ +   + + G ++    +        GQ  E+  ++IEI  +   + P+   G+  E
Sbjct: 63  KSITTGACISVVGTLVESQGK--------GQTSEIQCKEIEIYGLCPSDYPMQKKGQSFE 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           Y      KY  + LR +T       R  +  ++        F    TP++T S  EGA +
Sbjct: 115 YMR----KYGHMRLRTNTFGAVFRIRHNMAIAIHRYFHEHGFYYFHTPLITGSDAEGAGN 170

Query: 180 FLVPSRVN------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDED 224
               + ++               F+          QL   L A+     +   P FR E+
Sbjct: 171 MFQVTTLDLDRIAKSGKVDYNADFFGKRTNLTVSGQLEGELGATSLGAIYTFGPTFRAEN 230

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             + R   EF+ ++ E++F+++D++++  E+ ++
Sbjct: 231 SNTPRHLAEFWMVEPEVAFIDKDELMDLEEDFIK 264



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + +L    + G+ +EV    +       + G  PHGG   G +R+++ 
Sbjct: 386 EIIGGSVREENYDKLLAEIDSRGMKREV----YDWYLDTRKYGTCPHGGFGLGFERLILF 441

Query: 550 LLGAKNVREVSLF 562
           + G +N+R+V  F
Sbjct: 442 VTGMQNIRDVIPF 454


>gi|226362961|ref|YP_002780743.1| lysyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|296439701|sp|C1B7Z5|LYSX_RHOOB RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|226241450|dbj|BAH51798.1| putative lysyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 1114

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 106/226 (46%), Gaps = 21/226 (9%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+  +   S  G+ VR++G + R+R +GG++F  +RD  G  QV+ +      +  ++ 
Sbjct: 659 SHTVTEAVESPEGTTVRIAGRLLRIRDYGGVVFAVVRDWSGDIQVLVDEARVGTDRIRAF 718

Query: 66  RSEWVLC----IDGLV--MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
            +E+ L     + G++    R A ++ AN    +  ++ + +         PLP   +  
Sbjct: 719 AAEFDLGDLVEVAGVIGYSRRGALSLLAN----EWRMTGKCLH--------PLPDKWKGL 766

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGA 177
                R + R++DL  +T  + +++ R+ ++ S+R  +    F+E  TPIL        A
Sbjct: 767 SDPETRVRQRYVDLAINTDARRLLEARSAVVKSLRDSLGGRGFLEVETPILQQVHGGANA 826

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             FL          Y L  AP+ Y + L  +G ++ F+I   FR+E
Sbjct: 827 APFLTHINAYNLDLY-LRIAPELYLKRLCVAGMEKVFEIGRVFRNE 871



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           RN ++E  + A      + E+ E+      +A +
Sbjct: 1021 AAKWDLVAWGVELGTAYSELTDPVDQRNRLTEQSMLAAGGDEEAMELDED----FLQALE 1076

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  G+DR+VML+ G  ++RE   FP+++
Sbjct: 1077 HAMPPTGGLGMGVDRVVMLITGG-SIRETLAFPLAK 1111


>gi|19703801|ref|NP_603363.1| lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|39932224|sp|Q8RG52|SYK_FUSNN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|19713947|gb|AAL94662.1| Lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 493

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 114/255 (44%), Gaps = 21/255 (8%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLCIDGLV 77
           + +G +  +R  G + F  I D  G  Q+    D    E    I K +    ++ ++G +
Sbjct: 57  KTAGRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNVGDIIGLEGEL 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                E         ++ L  + I +L+     LP    G  +    IR++ R++DL  +
Sbjct: 117 FITHTE---------ELTLRVKSIALLTKNVRSLPEKYHGLTDV--EIRYRKRYVDLIMN 165

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
             + +  +KRT+II ++R  +    F+E  TPI+        A+ F+          + L
Sbjct: 166 PEVRETFIKRTKIIKAIRKYLDDRGFLEVETPIMHPILGGAAAKPFITHHNTLNIDLF-L 224

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+R + +   FR+E   +   P EF  +++  +  + +D+++  E
Sbjct: 225 RIAPELYLKKLIVGGFERVYDLNRNFRNEGISTRHNP-EFTMVELYQAHADFNDMMDLCE 283

Query: 255 NVLRGVFEEFSNGNT 269
            ++  V +E  NG T
Sbjct: 284 GIISSVCQEI-NGTT 297



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL GA ++R+V LFP
Sbjct: 452 ALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILFP 487


>gi|328770381|gb|EGF80423.1| hypothetical protein BATDEDRAFT_19596 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 577

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 125/260 (48%), Gaps = 16/260 (6%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V + V ++G +H +R    G+IF D++      Q++A+   +  +    V+   +L    
Sbjct: 112 VDTEVTVAGRIHNIRTQSKGLIFYDLQAEGCKIQIMASSQDSERDF---VQVHSLLHRGD 168

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL- 133
           +V  R     +     G++ +  + I +L+     LP   +G ++  + +R++ R+LDL 
Sbjct: 169 MVGVRGCAGRSKR---GELSMFPKDIVLLAPCLRMLPTSHYGFKD--QEMRYRMRYLDLI 223

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSF 191
               +   ++ R++IIN +R  + ++ F+E  TP++   +    A+ F+   + +N   F
Sbjct: 224 MNQHVRDKMITRSKIINYLRRFLDSKGFLEVETPMMNMIAGGATAKPFVTHHNDLNMDLF 283

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +  AP+ + + L+  G DR ++I   FR+E       P EF   +  M++ +  D+++
Sbjct: 284 MRI--APELFLKQLIVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADVHDLMS 340

Query: 252 TMENVLRGVFEEFSNGNTVS 271
             E  L G+ +  + G  + 
Sbjct: 341 MTEAFLSGLVKTLTGGYKIK 360



 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   G+DR+ M L  + N++EV  FP
Sbjct: 526 ALEYGLPPTGGWGLGLDRLTMFLTDSNNIKEVLPFP 561


>gi|329957693|ref|ZP_08298168.1| lysine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328522570|gb|EGF49679.1| lysine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 574

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 125/285 (43%), Gaps = 34/285 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F++++D  G  QV    D  C     E+  +V    +     +
Sbjct: 55  VAVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPGEDKEMYNTVFKRLLDLGDFI 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I+G V              G+I + AQK+ +L+ + + PLP+        +   + PE 
Sbjct: 115 GIEGFVFRTQM---------GEISIHAQKLTVLAKSIK-PLPIVKYKDGVAYDSFDDPE- 163

Query: 124 IRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDF 180
           +R++ R++DL   D + +  +KR  II +MR  +    + E  TPIL  S P G  AR F
Sbjct: 164 LRYRQRYVDLIVNDGVKETFLKRATIIKTMRAVLDEAGYTEVETPIL-QSIPGGASARPF 222

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                      Y L  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ 
Sbjct: 223 TTHHNSLDMDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-EFTCVELY 280

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           + + + + ++   E +L  +    + G   + +   I +    RR
Sbjct: 281 VQYKDYNWMMGFTEKLLERICIAVNGGTETTIDGKTISFKAPYRR 325



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A Q GMPP  GI  GIDR+ ML+ G   ++EV  FP
Sbjct: 460 KALQYGMPPTSGIGIGIDRLTMLMTGQAFIQEVLFFP 496


>gi|328463468|gb|EGF35119.1| lysyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 516

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 21/258 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      + I K       L IDG V
Sbjct: 61  TKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYNIFKKSDIGDFLGIDGEV 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
           M            TG++ + A  +  LS A   LP    G ++  E+I ++ R+LDL  +
Sbjct: 121 MKTD---------TGELTVRATHVTFLSKALRPLPDKYHGLKDV-EAI-YRQRYLDLITN 169

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
              +   V RT+II ++R  +  +NF+E  TP+L  + P G  AR F+          Y 
Sbjct: 170 CDSYMRFVHRTQIIQAIRDYLNKQNFLEVETPVL-HNIPGGAEARPFITHHNALDIDLYM 228

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                   K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  
Sbjct: 229 RIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDFHDVMDEA 286

Query: 254 ENVLRGVFEEFSNGNTVS 271
           E ++R   +  S+   ++
Sbjct: 287 EGIIRAAAKVVSDDGKIT 304



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 454 RAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 490


>gi|312131851|ref|YP_003999191.1| asparaginyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908397|gb|ADQ18838.1| asparaginyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 480

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 107/269 (39%), Gaps = 30/269 (11%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L ++  G  + + GWV   R    I+F++I D   +  +      A  E  K       L
Sbjct: 7   LKLTPEGQSIVVKGWVKTKRGQSNIVFININDGSTLKNI-----QAVVENGKISEDILKL 61

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  ++ + + + +      +E+ A+ IE+   A+E   P+  ++   E +R K   L
Sbjct: 62  ATTGSAIAVTGKLVASAGAGQTMEVLAETIEVYGTADE-SYPIQPKKHSLEFLREKAH-L 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
             R +        R  +  ++      + F    TPI+TAS  EGA +     RV+    
Sbjct: 120 RFRTNVFGAVFRIRHALAYAVHKFYNEQGFFYLHTPIITASDAEGAGEMF---RVSTFEP 176

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
              P  P+                    Q +  L A    R +   P FR E+  + R  
Sbjct: 177 NKAPLTPEGNIDFSQDFFGRETALTVSGQLEGELGALALSRIYTFGPTFRAENSNTSRHL 236

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            EF+ ++ E++F E +D +N  E+ ++ V
Sbjct: 237 AEFWMIEPEVAFFELEDNMNLAESFVKYV 265



 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 12/80 (15%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
           EI  G  R    E ++     VGI  E     +E R        + G  PH G   G +R
Sbjct: 403 EIIGGSQREDNYEKLMARVKEVGIDPENIWWYLETR--------KFGSAPHSGFGLGFER 454

Query: 546 IVMLLLGAKNVREVSLFPMS 565
           +V+ + G  N+R+V  FP +
Sbjct: 455 LVLFVTGMTNIRDVIPFPRT 474


>gi|238855046|ref|ZP_04645374.1| lysine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|282934832|ref|ZP_06340066.1| lysine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472616|ref|ZP_07813105.1| lysine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832290|gb|EEQ24599.1| lysine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529433|gb|EEQ68434.1| lysine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|281301104|gb|EFA93414.1| lysine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 507

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 25/274 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F DI D  G  Q+    D      ++I K       L I+G V
Sbjct: 60  TKIAGRMMAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYQIFKKSDLGDFLGIEGEV 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDLRRD 136
           M            TG++ + A  +  LS A   PLP  +   +  E I ++ R+LDL   
Sbjct: 120 MKTD---------TGELTVRAHHVTFLSKALR-PLPDKYHGLQNVEQI-YRQRYLDLM-- 166

Query: 137 TLHKN---IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSF 191
           T H++    V RT+II ++R  +   +F+E  TP+L  + P G  AR F+          
Sbjct: 167 TNHESYMRFVHRTKIIQAIRDYLNNRDFLEVETPVL-HNIPGGAEARPFITHHNALDIDL 225

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A +   + L+  G +R ++I   FR+E   +   P EF +L+   ++ +  D+++
Sbjct: 226 Y-LRIALELPLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTELETYCAYWDFHDVMD 283

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             E +++   +  ++   V+     I      RR
Sbjct: 284 EAEGIIKAAAKVVTDDGKVNYQGTEIDLGKPFRR 317



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 453 RALEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 489


>gi|41582294|gb|AAS07908.1| asparaginyl-tRNA synthetase [uncultured marine bacterium 463]
          Length = 465

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 128/328 (39%), Gaps = 55/328 (16%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRD--HYGITQVVANPDSA 57
           M  + T      G   VGS V + GW+   R    GI FL + D   +   Q V   D  
Sbjct: 1   MSEFTTVVAALKGELAVGSQVMVKGWLRSKRDSKAGISFLAVHDGTAFDAIQAVVPSDLD 60

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG 116
            +E      SE +    G  +    E + +      +E+ A ++E++  V +    P+  
Sbjct: 61  NYE------SEVLKLSTGCAVVICGELVESQGKGQSVEIQATEVEVVGWVDDAETYPIAK 114

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           +R   E +R +   L  R +T       RT + N++       +F   +TPILT S  EG
Sbjct: 115 KRHTFEYLRTQAH-LRPRTNTFGAITRVRTTLANAIHNYFHDNDFNWINTPILTGSDCEG 173

Query: 177 ARDFLVPSRVNQGSFYALPQAPQ----------QYKQLLMASG----------FDRYFQI 216
           A +     RV+   F  LP   +            +  L  SG            + +  
Sbjct: 174 AGELF---RVSTLDFANLPLDGKGGVNFEEDFFAGESFLTVSGQLEVESYCLAMSKVYTF 230

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF----EEFSNG----- 267
            P FR E+  + R   EF+ ++ E++F + +D  +  E++L+ VF    EE  +      
Sbjct: 231 GPTFRAENSNTSRHLAEFWMVEPEIAFADLNDDADLAESLLKHVFTRILEEREDDMAFFQ 290

Query: 268 ------------NTVSNNFLRICYDDAI 283
                         + NNF R+ Y +AI
Sbjct: 291 QRIDKTVIDRLRAVIDNNFERMDYSEAI 318


>gi|320164122|gb|EFW41021.1| lysyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 551

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 125/270 (46%), Gaps = 30/270 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G S     V ++G ++  R  G  +IF D+R      QV+A+        A+++  ++  
Sbjct: 73  GSSLTDVTVSVAGRIYSKRESGAKLIFYDLRGEGVKIQVMAD--------ARTLEGDF-- 122

Query: 72  CIDGLVMSR--SAETINANIITGQI---ELSAQKIEILSVA---EELPLPVFGEREYPES 123
              G + +R    + I      G+    ELS   +E+  ++     LP   FG ++  + 
Sbjct: 123 ---GKINARFRRGDIIGVRGHPGKSKRGELSIFPVELTLLSPCLRVLPTLHFGLKD--QE 177

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           +R++ R+LDL   D      V R +IIN +R  +    F+E  TP++   +    A+ F+
Sbjct: 178 LRYRQRYLDLMLNDATRNKFVVRNKIINYLRRFLDQLGFLEVETPMMNMIAGGATAKPFI 237

Query: 182 VP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              + +N   F  +  AP+ Y + L+  G DR ++I   FR+E       P EF   +  
Sbjct: 238 THHNDLNMNLFMRI--APELYLKQLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFY 294

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
           M++ + +D+++  E +L G+ +  + G  +
Sbjct: 295 MAYADYNDLMSITETLLSGMVKYITGGYVI 324



 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   G+DR+ M L  + N++EV LFP
Sbjct: 491 SLEFGLPPTGGWGMGLDRLTMFLTDSNNIKEVLLFP 526


>gi|294496950|ref|YP_003560650.1| lysyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294346887|gb|ADE67216.1| lysyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 494

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/281 (21%), Positives = 125/281 (44%), Gaps = 28/281 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLV 77
           V L+G +   R  G   F  ++D  G  Q+    D+     +EI  SV    ++ ++G++
Sbjct: 60  VSLAGRIMTKRGKGKAGFAHVQDLTGQIQLYVRKDAIGEEQYEIFSSVDIGDLVGVEGVL 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
                         G++ +  +   +L+ A   LP    G ++  +  R++ R+LDL  +
Sbjct: 120 FKTKV---------GELSIKVKDFTLLTKALRPLPDKYHGLKDIEQ--RYRQRYLDLITN 168

Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
              K   + R+RII SMR  +    ++E  TP++ + +    AR F+          Y +
Sbjct: 169 PESKQTFISRSRIIQSMRRYLDNHGYLEVETPMMHSIAGGAAARPFVTHHNALDMELY-M 227

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI+   E
Sbjct: 228 RIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDIMALTE 286

Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286
           N++  + +E      +         +  + R+   DAI++Y
Sbjct: 287 NLIAHIAQEVLGTTKIQYGDQEVDLTPEWTRLHMVDAIKQY 327



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 454 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFP 489


>gi|255037962|ref|YP_003088583.1| asparaginyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254950718|gb|ACT95418.1| asparaginyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 479

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 107/264 (40%), Gaps = 37/264 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDG-LV 77
           V + GWV   R     IF+ + D   I   Q VA P     E+  +V +   L + G L+
Sbjct: 19  VVVKGWVRTKRESKNAIFIALNDGSTINNIQAVAEPGQFSAELLLTVTTGSCLKVTGQLI 78

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            S+ A         GQ +E+    IE+   A+    P+  ++   E +R +   L  R +
Sbjct: 79  ASQGA---------GQTVEVKITDIEVYGTADPEEYPLQPKKHSLEFLR-EIAHLRPRTN 128

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T    +  R  +  ++      + F    TP++TAS  EGA +     RV       LP+
Sbjct: 129 TFSAILRIRHALAFAVHQYFNEKGFFYLHTPVITASDAEGAGEMF---RVTTLDLNNLPR 185

Query: 197 APQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +                    Q +  L A    + +   P FR E+  + R   EF+ 
Sbjct: 186 TEEGAINFKEDFFGREANLTVSGQLEGELGAMALSKIYTFGPTFRAENSNTTRHLAEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGV 260
           ++ EM+F E +D ++  E+ ++ V
Sbjct: 246 IEPEMAFFELEDNMDLAEDFVKKV 269



 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 12/78 (15%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
           EI  G  R    E +L     +GI  E     +E R        + G  PH G   G +R
Sbjct: 402 EIIGGSQREESYEKLLGRVKEIGIDPENLWWYLETR--------KFGTAPHSGFGLGFER 453

Query: 546 IVMLLLGAKNVREVSLFP 563
           +V  + G  N+R+V  FP
Sbjct: 454 LVQFVTGMGNIRDVIPFP 471


>gi|262197984|ref|YP_003269193.1| asparaginyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262081331|gb|ACY17300.1| asparaginyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 466

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 128/330 (38%), Gaps = 55/330 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G  +VG+ V + GWV   R    G+ FL + D   +   QVVA  + A +E       + 
Sbjct: 12  GAVEVGTPVVIEGWVRTRRDSKAGLSFLHVSDGSCFDPLQVVAPSELADYE-------DV 64

Query: 70  VLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILS-VAEELPLPVFGEREYPESIRFK 127
           VL +      R    + A+   GQ +E+ A+ IE++  V      P+  +R   E +R  
Sbjct: 65  VLKLSTGCAVRVRGELKASQGKGQSVEVQAESIEVVGWVDSPETYPMQPKRHSMEYLR-- 122

Query: 128 YRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSR 185
                LR  T     V R R  ++    R   E+ F    TPI+TAS  EGA +    S 
Sbjct: 123 -EVAHLRPRTNIIGAVTRVRHSLSQAIHRFFHEHGFFWIHTPIITASDAEGAGEMFRVST 181

Query: 186 VNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSD 228
           ++  +    P+    Y +        L  SG            R +   P FR E+  + 
Sbjct: 182 LDMANLPRTPEGGVDYDKDFFGREAHLTVSGQLNVETYCLAMSRVYTFGPTFRAENSNTR 241

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF---------------------SNG 267
           R   EF+ ++ E++F +  D +   E  L+ +F E                         
Sbjct: 242 RHLAEFWMIEPEIAFADLGDDITLAEQFLKYIFAEVLRERADDMAFFDKWVDKGCIERTE 301

Query: 268 NTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
             +++ F R+ Y DA+R     K     P+
Sbjct: 302 KLLASPFTRMDYSDAVRELEKAKKKFEFPV 331



 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 7/91 (7%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    EV+ +  + VG+  E         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLEVLDKRIAEVGLEPEPY-----WWYRDLRRYGTVPHAGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G +R +  L G  N+R+V  FP +    D 
Sbjct: 436 LGFERAIQYLTGVDNIRDVIPFPRAPRQADF 466


>gi|213965141|ref|ZP_03393339.1| lysyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213952255|gb|EEB63639.1| lysyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 510

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 22/279 (7%)

Query: 5   RTHSCGDL--------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  D+           +    V + G V  +R  G + F  +++  G T       +
Sbjct: 42  RTHSLKDVREEWGHLEAGEETQDVVTVIGRVMFIRNTGKLCFAALQEGDGTTLQAMLSKA 101

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV- 114
              E+ +   + W   +D G  +  +   I++    G++ + A + ++ S A   PLPV 
Sbjct: 102 ---EVGEDALAAWKADVDMGDFVLITGRVISSR--RGELSVMATEWQMASKALR-PLPVS 155

Query: 115 FGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
           F +    E  R ++R+ DL  R+    N + R ++I  +R  +    F+E  TP+L T  
Sbjct: 156 FAD--LSEDSRVRHRYTDLIMREQARTNALTRIKVIRELRHALERRGFLEVETPMLQTLH 213

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+  S       Y L  AP+ Y +  +  G +R F+I   FR+E   S   P 
Sbjct: 214 GGAAARPFVTHSNALDIDLY-LRIAPELYLKRCVVGGMERVFEINRNFRNEGIDSSHSP- 271

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           EF  L+   +F   DD   T+  V++ +        TV+
Sbjct: 272 EFAMLEYYEAFGTYDDSARTVREVIQEICVAVFGSTTVT 310



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSN-----VGISKE--VVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        V  + F +      G   E  V++  F     A + GM
Sbjct: 419 KWDLYVRGFELATGYSELVDPVVQRERFEDQARLAAGGDDEAMVLDEDF---LHAMEQGM 475

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G+  GIDR++M L G   +RE  LFP+
Sbjct: 476 PPTTGVGMGIDRLLMALTGL-GIRETVLFPI 505


>gi|148270135|ref|YP_001244595.1| lysyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|281412523|ref|YP_003346602.1| lysyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|166230599|sp|A5ILE6|SYK_THEP1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|147735679|gb|ABQ47019.1| lysyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|281373626|gb|ADA67188.1| lysyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 502

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 21/261 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-- 60
           +Y     G++  S+  SF   +G V  +R HG   F  ++D  G  Q     DS   E  
Sbjct: 40  KYDYLQAGEVLESEKLSF---AGRVMSIRHHGKTAFFHMKDDTGRIQAYVRADSVGKEKM 96

Query: 61  --IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
               + V+    + + G               TG++ +  Q+  +LS A   PLP     
Sbjct: 97  DLFKRHVKIGDFIGVRGFPFKSK---------TGELTIYVQEYTLLSKALR-PLPEKWHG 146

Query: 119 EYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + I ++ R+L+L   D   +   KR + +  +R  + +  FIE  TPIL   +    
Sbjct: 147 IKDKEIIYRQRYLELIVSDEAIERFRKRFKAVQVIREFLNSRGFIEVETPILHYVTGGAE 206

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+    V     Y L  AP+ Y + L+  GF++ ++I   FR+E       P EF  
Sbjct: 207 ARPFVTHLNVFDIDMY-LRIAPELYLKRLIIGGFEKIYEIGKNFRNEGISYKHSP-EFTS 264

Query: 237 LDMEMSFVEQDDILNTMENVL 257
           +++  ++ + +D+++  E ++
Sbjct: 265 IEIYQAYADYNDMMDLTEELI 285



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 26/40 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           RA + GMPP GG+  G+DR+ M +  +  +R+V  FP+ +
Sbjct: 446 RALEYGMPPTGGLGIGLDRLFMFITDSPTIRDVIPFPIVK 485


>gi|15644453|ref|NP_229505.1| lysyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|11387158|sp|Q9X231|SYK_THEMA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|4982282|gb|AAD36772.1|AE001810_11 lysyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 502

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 21/261 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-- 60
           +Y     G++  S+  SF   +G V  +R HG   F  ++D  G  Q     DS   E  
Sbjct: 40  KYDYLQAGEVLESEKLSF---AGRVMSIRHHGKTAFFHMKDDTGRIQAYIKADSVGKEKM 96

Query: 61  --IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
               + V+    + + G               TG++ +  Q+  +LS A   PLP     
Sbjct: 97  DLFKRHVKIGDFVGVRGFPFKSK---------TGELTIYVQEYTLLSKALR-PLPEKWHG 146

Query: 119 EYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + I ++ R+L+L   D   +   KR + +  +R  + +  FIE  TPIL   +    
Sbjct: 147 IKDKEIIYRQRYLELIVNDEAIERFKKRFKAVRVIREFLNSRGFIEVETPILHYVTGGAE 206

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+    V     Y L  AP+ Y + L+  GF++ ++I   FR+E       P EF  
Sbjct: 207 ARPFVTHLNVFDIDMY-LRIAPELYLKRLIVGGFEKIYEIGKNFRNEGISYKHSP-EFTS 264

Query: 237 LDMEMSFVEQDDILNTMENVL 257
           +++  ++ + +D+++  E ++
Sbjct: 265 IEIYQAYADYNDMMDLTEELI 285



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 26/40 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           RA + GMPP GG+  G+DR+ M +  +  +R+V  FP+ +
Sbjct: 446 RALEYGMPPTGGLGIGLDRLFMFITDSPTIRDVIPFPIVK 485


>gi|295132554|ref|YP_003583230.1| lysyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294980569|gb|ADF51034.1| lysyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 563

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 122/265 (46%), Gaps = 20/265 (7%)

Query: 7   HSCGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           H+  D+  + + G  V ++G +   R  G   F +++D  G  QV  N D  C +  KS 
Sbjct: 34  HTSADIKTNFEEGKKVVIAGRLMSRRIQGKASFAELQDSKGKIQVYFNRDEICTDEDKSK 93

Query: 66  RSE-WVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP-------VF 115
            ++ +   +D G  +    E     +  G++ +  +  E+LS +   LPLP        +
Sbjct: 94  YNDVYKKLLDIGDFIGIQGELFKTQV--GEMTVMVKDFELLSKSIRPLPLPKTDKEGNTY 151

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                PE  R++ R+ DL  +   K I VKRT++ ++MR       + E  TPIL  S P
Sbjct: 152 DGFTDPEH-RYRQRYADLAVNPKVKEIFVKRTKLFSAMRNFFNEAGYFEVETPIL-QSIP 209

Query: 175 EG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
            G  AR F+          Y L  A + Y + L+  GFD  ++ +  FR+E       P 
Sbjct: 210 GGAAARPFITHHNALDIPLY-LRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVL 257
           EF  +++ +++ + + +++  E +L
Sbjct: 268 EFTAMEIYVAYKDYNWMMDFTEKLL 292



 Score = 44.3 bits (103), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VM L   ++++EV  FP
Sbjct: 456 RALEYGMPPTSGLGIGMDRLVMFLTNNQSIQEVLFFP 492


>gi|192359674|ref|YP_001982939.1| lysyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190685839|gb|ACE83517.1| lysyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 532

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 36/288 (12%)

Query: 23  LSGWVHRVRPHGGII-----FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           L    H+V   G ++     F+ ++D  G  Q+ A  D A  E+ K     W L   G +
Sbjct: 95  LEALDHKVSVAGRLMAKRGPFMVLQDGDGTIQLYA--DKAAQEVIKENWGVWDL---GDI 149

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---- 133
           +  +     +    G + ++ ++ ++L+ +   PLP        + IR++ R++DL    
Sbjct: 150 VGVTGALHKSG--KGDLYVNLEQFQLLTKSLR-PLPDKYHGLSDQEIRYRQRYVDLIVNP 206

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
             RDT       R++ I+ +R  M    F+E  TP+L    P GA  R F+         
Sbjct: 207 EVRDTFRL----RSQCISFIRNYMSGRGFMEVETPMLHVI-PGGASARPFVTHHNALDMD 261

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   ++ +  D++
Sbjct: 262 MF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMMEFYQAYADYKDLM 319

Query: 251 NTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTD 289
           +  E++LR +  + + G T+            F+R+   D+I  Y  D
Sbjct: 320 DLTEDLLRKLCIDVTGGTTLKYQDSEYDFGKPFVRLSVFDSILHYNPD 367



 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR++ML   A ++R+V LFP
Sbjct: 491 RALEYGLPPTAGEGIGIDRLIMLFANAPSIRDVLLFP 527


>gi|309356245|emb|CAP37482.2| CBR-NARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 564

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 105/239 (43%), Gaps = 10/239 (4%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-AKSVRSEWVLCIDGLVM 78
           V +  WVHR+R  G  ++FL +RD YG  Q V N D  C    A ++ +E  + + G++ 
Sbjct: 130 VTIKAWVHRLRRQGKSLMFLILRDGYGFLQCVLN-DKLCQSYDAVTLSTESSVQVYGVIR 188

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           +      N        EL+    E++  +    +     ++    +    R L +R +  
Sbjct: 189 A----VPNGKDAPDGHELTVDYWELIGGSPAGGIDNVLNKDAGVDVMLDNRHLVIRGENA 244

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
            + +  R     +MR    A ++ E + P L  +  EG           + ++  L Q+ 
Sbjct: 245 SRILRIRAAATRAMRDHFFAASYTEVAPPTLVQTQVEGGSTLFGLDYYGEPAY--LTQSS 302

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           Q Y +   A+  D Y  IA  +R E  R+ R   E+  ++ E +F+  D +++ +E+++
Sbjct: 303 QLYLETCNAALGDVYC-IAQSYRAEKSRTRRHLSEYQHVEAECAFITFDQLMDRIESLV 360



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G +R    + ML AF   G+S     N F  + +  + G  PHGG   
Sbjct: 479 DLLMPGVGEIVGGSMRIWKEDEMLAAFERAGLSPT---NYFWYMDQR-KYGSVPHGGYGL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R +  L G  ++R+V L+P
Sbjct: 535 GLERFICWLTGTNHIRDVCLYP 556


>gi|194879712|ref|XP_001974286.1| GG21647 [Drosophila erecta]
 gi|190657473|gb|EDV54686.1| GG21647 [Drosophila erecta]
          Length = 558

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 117/295 (39%), Gaps = 39/295 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G ++  S V++ GWVHR+R  G  +IF+ +RD  G  Q V N D  C             
Sbjct: 130 GTANRDSRVKVYGWVHRLRRQGKSLIFITLRDGTGFLQCVLN-DQLC------------Q 176

Query: 72  CIDGLVMSRSAETI---------NANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             D L +S  +  +               G  EL+    E++ +A           E   
Sbjct: 177 TYDALTLSTESSVVLFGTLKLVPEGKTAPGGHELNVDYWELIGLAPPGGADAILNEEAQP 236

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++   R + +R +   K +  R+ +  + R    A  + E + P L  +  EG      
Sbjct: 237 DVQLDNRHIMIRGENTSKVLKMRSVVTQAFRAHYEARGYNEVTPPTLVQTQVEGGSTLFK 296

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                + ++  L Q+ Q Y +  + +  D  F I+  +R E  R+ R   E+  ++ E +
Sbjct: 297 LKYFGEEAY--LTQSSQLYLETCLPALGD-VFTISQSYRAEQSRTRRHLAEYSHVEAECA 353

Query: 243 FV--------EQDDILNTMENVLRG-----VFEEFSNGNTVSNNFLRICYDDAIR 284
           F+         +D + + ++ VL+      V E   +       F R+ Y+DAI+
Sbjct: 354 FLTFDDLLDRLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRRMNYEDAIK 408



 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 12/90 (13%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGI 539
           L+ N  EI  G +R + SE +L+ ++  GI  +      + R  G          PHGG 
Sbjct: 475 LLPNVGEIVGGSMRIYDSEELLKGYAREGIDPKPYYWYTDQRIYGTM--------PHGGY 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G++R +  LL   ++REV L+P   + C
Sbjct: 527 GLGLERFLCWLLNRYHIREVCLYPRFLDRC 556


>gi|152973925|ref|YP_001373442.1| lysyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|189082695|sp|A7GJY9|SYK_BACCN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|152022677|gb|ABS20447.1| lysyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 499

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 135/312 (43%), Gaps = 48/312 (15%)

Query: 5   RTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RTHS  +L ++  G F           V ++G +   R  G   F  I+D +G  Q+   
Sbjct: 37  RTHSSKEL-LNLYGEFSKEELEEKAISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVR 95

Query: 54  PDSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EE 109
            D+     +E+ K+     ++ I+G V   +          G++ + A    +L+ +   
Sbjct: 96  KDAVGDEEYELFKTADLGDLVGIEGKVFKTNV---------GELSVKATSFTLLTKSLRP 146

Query: 110 LPLPVFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           LP    G ++  +  R++ R+LDL      R+T     V R++II  MR  +    ++E 
Sbjct: 147 LPDKYHGLKDIEQ--RYRQRYLDLITSMESRETF----VTRSKIIREMRRYLDDNGYLEV 200

Query: 165 STPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP++ T +    AR F+          Y +  A + + + L+  G ++ ++I   FR+E
Sbjct: 201 ETPMMHTIAGGASARPFITHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NF 274
              +   P EF  +++  ++ +  DI+   EN++  + +      T+            +
Sbjct: 260 GVSTRHNP-EFTMIELYEAYADYKDIMKLTENMIAHIAKRVLGTTTIQYGEHEINLEPEW 318

Query: 275 LRICYDDAIRRY 286
            R+   DAI++Y
Sbjct: 319 TRLHMVDAIKQY 330



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPTMRHKQD 499


>gi|229105186|ref|ZP_04235835.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228678112|gb|EEL32340.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 463

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 132/320 (41%), Gaps = 55/320 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V     ++
Sbjct: 21  VQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSSVKVEGKVI 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A+KI+I  +++    P+  +R   E +R       LR  T
Sbjct: 81  ATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHLRPRT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARD-FLVPSR----VNQGS 190
              +   R R I +       +   F+   TPI+T S  EGA + F V ++    V++G 
Sbjct: 129 NAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVSKGE 188

Query: 191 FYALPQAPQ------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
              + ++              Q      A  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 DGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMVE 248

Query: 239 MEMSFVEQDDILNTMENVLR--------------GVFEEFSN-------GNTVSNNFLRI 277
            E++F E  D+++  E++L+                F  F +        N ++++F RI
Sbjct: 249 PEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVINSDFGRI 308

Query: 278 CYDDAIRRYGTDKPDLRNPI 297
            Y +AI+       D + P+
Sbjct: 309 TYTEAIKVLQESGADFKYPV 328


>gi|317055780|ref|YP_004104247.1| lysyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315448049|gb|ADU21613.1| lysyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 525

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/284 (21%), Positives = 127/284 (44%), Gaps = 31/284 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G +   R  G   F+D+RD  G  Q+    +    E+ K     +V   D G ++ 
Sbjct: 89  VSIAGRIMSKRMMGKASFMDLRDKSGKIQLYVRMN----EVGKEAFDRYVKKGDIGDIVG 144

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTL 138
            +       +  G+I + A+   +LS   + PLP        +  R++ R+ DL     +
Sbjct: 145 ITGFVFRTRM--GEISVHAESFTLLSKNLQ-PLPEKWHGLKDQDTRYRQRYTDLICNPEV 201

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ-- 196
               +KR++II+++R  +    F+E  TP+L +++   A      +R  +  + AL +  
Sbjct: 202 KDTFIKRSKIISTIRRYLDERGFMEVETPMLVSNAGGAA------ARPFETHYNALDEDV 255

Query: 197 ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
               + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   +++ 
Sbjct: 256 KLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDARHNP-EFTLMELYQAYTDYHGMMDL 314

Query: 253 MENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
            E++ R + E    G T+            F R+   +A+++Y 
Sbjct: 315 TEDMFRHLAETVCGGTTIPYGEHQIDLGKPFERLTMIEAVKKYA 358



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GGI  GIDR+VMLL  +  +R+V LFP
Sbjct: 483 RALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLFP 519


>gi|260664830|ref|ZP_05865681.1| lysyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|260561313|gb|EEX27286.1| lysyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
          Length = 514

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 25/274 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F DI D  G  Q+    D      ++I K       L I+G V
Sbjct: 67  TKIAGRMMAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYQIFKKSDLGDFLGIEGEV 126

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDLRRD 136
           M            TG++ + A  +  LS A   PLP  +   +  E I ++ R+LDL   
Sbjct: 127 MKTD---------TGELTVRAHHVTFLSKALR-PLPDKYHGLQNVEQI-YRQRYLDLM-- 173

Query: 137 TLHKN---IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSF 191
           T H++    V RT+II ++R  +   +F+E  TP+L  + P G  AR F+          
Sbjct: 174 TNHESYMRFVHRTKIIQAIRDYLNNRDFLEVETPVL-HNIPGGAEARPFITHHNALDIDL 232

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A +   + L+  G +R ++I   FR+E   +   P EF +L+   ++ +  D+++
Sbjct: 233 Y-LRIALELPLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTELETYCAYWDFHDVMD 290

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             E +++   +  ++   V+     I      RR
Sbjct: 291 EAEGIIKAAAKVVTDDGKVNYQGTEIDLGKPFRR 324



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 460 RALEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 496


>gi|313123090|ref|YP_004033349.1| lysyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312279653|gb|ADQ60372.1| Lysyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 507

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 151/358 (42%), Gaps = 49/358 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      ++I K       L ++G V
Sbjct: 60  TKIAGRMLAKRGKGKVGFADLYDRSGKIQIYVRKDMVGEENYQIFKKADLGDFLGVEGEV 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RR 135
                        +G++ + AQ +  LS A   LP    G ++  ESI ++ R+LDL   
Sbjct: 120 FKTD---------SGELSVRAQHVTFLSKALRPLPDKYHGLKDV-ESI-YRQRYLDLITN 168

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
              ++  V RT+II ++R  +  ++F+E  TP+L  + P G  AR F+        + Y 
Sbjct: 169 HESYQRFVNRTKIIQAIRDYLNGQDFLEVETPVLH-NIPGGAEARPFITHHNALDINLYM 227

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                   K+L++    +R ++I   FR+E       P EF +L+   ++ +  D+++  
Sbjct: 228 RIALELPLKRLIVGD-MERVYEIGRVFRNEGMDLKHNP-EFTELETYAAYYDFHDVMDEA 285

Query: 254 ENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTD--KP----DLRNPI 297
           E ++R   +  S    ++           F R+   D I+   G D  +P    + R   
Sbjct: 286 EGIIRAAAKVVSEDGKINYQGTDLDLGKPFRRVHMVDLIKELTGVDFWQPMTLEEARKVA 345

Query: 298 IMHNV-------TEHFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGNRAFCDR 343
             H+V         H +++ F  F +   V+P    G+ V   P AK    +  F DR
Sbjct: 346 AEHHVEVEPYWQVGHIINAFFEEFGEKTIVDPTFVYGHPVEVSPLAKKNADDPRFTDR 403



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 453 RAMEYGMPPTGGLGIGIDRLVMLLTNAASIRDVLLFP 489


>gi|308502742|ref|XP_003113555.1| CRE-KARS-1 protein [Caenorhabditis remanei]
 gi|308263514|gb|EFP07467.1| CRE-KARS-1 protein [Caenorhabditis remanei]
          Length = 596

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 109/240 (45%), Gaps = 10/240 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G +H  R  G  ++F DI       Q++AN      ++      + +   D +  +
Sbjct: 129 VSVAGRIHSKRESGSKLVFYDIHGEGTRIQIMANAKFHTGDVDFVTLHDRIKRGDIVGFT 188

Query: 80  RSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT- 137
             A    A    G++ L  +++ ++      LP   FG ++  + +RF+ R+LDL  +  
Sbjct: 189 GQATRTKA----GELSLIPKEVLQLTPCLHMLPHSHFGLKD--KELRFRKRYLDLILNPR 242

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           +  N V R++II  +R  +    F+E  TPI+   +        +    +      L  A
Sbjct: 243 IKDNFVIRSKIITFLRRYLDNLGFLEVETPIMNQIAGGATAKPFITHHNDLDMNLFLRVA 302

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y ++L+  G DR +++   FR+E       P EF   +  M++ + +D++   E++L
Sbjct: 303 PELYHKMLVVGGIDRVYEVGRLFRNEGIDLTHNP-EFTTCEFYMAYADYEDVIQLTEDLL 361



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M+L    N++EV LFP
Sbjct: 540 ALEYGLPPTGGWGMGIDRLSMILTDNNNIKEVLLFP 575


>gi|328788617|ref|XP_623936.2| PREDICTED: lysyl-tRNA synthetase [Apis mellifera]
          Length = 587

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 24/250 (9%)

Query: 23  LSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           ++G VH +R  G  +IF D+R      QV+AN        A+  ++E     D +   R 
Sbjct: 115 IAGRVHAIRESGAKLIFFDLRGEGVKIQVMAN--------ARHYKNEEKFTPD-ISKIRR 165

Query: 82  AETIN-----ANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-R 134
            + I           G+  +    I +LS     LP   FG ++  +  RF+ R+LDL  
Sbjct: 166 GDIIGVVGNPGKTKKGEFSIMPHSIILLSPCLHMLPNLYFGLKD--KETRFRQRYLDLIL 223

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFY 192
            D + K    R +I+  +R  +    F+E  TP++    P GA  + F+          Y
Sbjct: 224 NDKVRKTFHIRAKIVAYVRKFLDELGFLEVETPMMNII-PGGATAKPFITHHNELNMDLY 282

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D+++ 
Sbjct: 283 -MRIAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYNDLMSI 340

Query: 253 MENVLRGVFE 262
            E+++ G+ +
Sbjct: 341 TEDMISGMIK 350



 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDRI M L  + N++EV LFP
Sbjct: 523 ALEYGLPPTAGWGMGIDRITMFLTDSNNIKEVLLFP 558


>gi|323509049|dbj|BAJ77417.1| cgd7_1540 [Cryptosporidium parvum]
          Length = 250

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D    G EI SG  R H  +++++     G+S+  + +       +F+ G PPHGG   
Sbjct: 165 FDFFMRGEEILSGAQRVHDYDLLVKRCQECGVSEHSLRDYLN----SFKLGAPPHGGCGI 220

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R++ML L   N+R+ S+FP
Sbjct: 221 GLERVIMLFLNLGNIRKSSMFP 242


>gi|317475550|ref|ZP_07934812.1| lysyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316908254|gb|EFV29946.1| lysyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 579

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 16/276 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV    D  C +  K + +     +  L    
Sbjct: 60  VSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPDEDKEMYNTVFKRLLDLGDFI 119

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             E        G+I + AQK+ +L+ + + PLP+        +   + PE +R++ R++D
Sbjct: 120 GIEGFVFRTQMGEISIHAQKLTVLAKSIK-PLPIVKYKDGVAYDSFDDPE-LRYRQRYVD 177

Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQG 189
           L   D + +   KR  II +MR  +    + E  TPIL  S P G  AR F         
Sbjct: 178 LIVNDGVKETFQKRATIIRTMRAALDEAGYTEVETPIL-QSIPGGASARPFTTHHNSLDM 236

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ + + + + +
Sbjct: 237 DLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-EFTCVELYVQYKDYNWM 294

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +   E +L  +    + G   + +   I +    RR
Sbjct: 295 MGFTEKLLERICIAVNGGTETTIDGKTISFKAPYRR 330



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A Q GMPP  GI  GIDR+ ML+ G   ++EV  FP
Sbjct: 465 KALQYGMPPTSGIGIGIDRLTMLMTGQPFIQEVLFFP 501


>gi|242060462|ref|XP_002451520.1| hypothetical protein SORBIDRAFT_04g003180 [Sorghum bicolor]
 gi|241931351|gb|EES04496.1| hypothetical protein SORBIDRAFT_04g003180 [Sorghum bicolor]
          Length = 307

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H+ +++    +  GI    +         AF+ G PPHGG   
Sbjct: 222 FDVFVRGEEIISGAQRVHVPDLLAAQAAARGIDVASIAT----YVDAFRYGAPPHGGFGV 277

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML  G  N+R+ SLFP
Sbjct: 278 GLERVVMLFCGLGNIRKTSLFP 299



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 3/108 (2%)

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
            F+   TP L   S EG           Q +   L Q+PQ +KQ+ +  GF R F++ P 
Sbjct: 20  GFVGIHTPKLIGGSSEGGAAVFKLDYNGQAA--CLAQSPQLHKQMAVCGGFGRVFEVGPV 77

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
           FR ED  + R   EF  LD+EM+  +   ++ + ++ +   +F+  ++
Sbjct: 78  FRAEDSDTHRHLCEFVGLDVEMALRDHYTEVCDVVDRLFVAMFDHLND 125


>gi|297205109|ref|ZP_06922505.1| lysine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297149687|gb|EFH29984.1| lysine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 513

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 21/272 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F DI D  G  Q+    D      ++I K       L I+G V
Sbjct: 67  TKIAGRMMAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYQIFKKSDLGDFLGIEGEV 126

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDLRRD 136
           M            TG++ + A  +  LS A   PLP  +   +  E I ++ R+LDL  +
Sbjct: 127 MKTD---------TGELTVRAHHVTFLSKALR-PLPDKYHGLQNVEQI-YRQRYLDLMTN 175

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
              +   V RT+II ++R  +   +F+E  TP+L  + P G  AR F+          Y 
Sbjct: 176 HDSYMRFVHRTKIIQAIRDYLNNRDFLEVETPVL-HNIPGGAEARPFITHHNALDIDLY- 233

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  A +   + L+  G +R ++I   FR+E   +   P EF +L+   ++ +  D+++  
Sbjct: 234 LRIALELPLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTELETYCAYWDFHDVMDEA 292

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           E +++   +  ++   V+     I      RR
Sbjct: 293 EGIIKAAAKVVTDDGKVNYQGTEIDLGKPFRR 324



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 460 RALEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 496


>gi|50365297|ref|YP_053722.1| asparaginyl-tRNA synthetase [Mesoplasma florum L1]
 gi|59798528|sp|Q6F0Y5|SYN_MESFL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|50363853|gb|AAT75838.1| asparaginyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 454

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 22/267 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + G V   R    + F+ + D   +   QVV  P++  FE     R   ++ I+G+++
Sbjct: 18  VTIIGRVRSNRQGKAVSFMVLNDGTVLNDLQVVYKPETFGFEQGSKARVSSIVEIEGILI 77

Query: 79  SRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                           E++A  I +L  A EE PL    +   PE +R +   L  R  T
Sbjct: 78  PTPTRP-------QPFEINATSITLLDQAIEEYPLQ--KKEHSPEFLR-EISHLRARTKT 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP-- 195
                  R+    ++       N++  +TPI+T++  EGA +  V + VN+   YA    
Sbjct: 128 FQAIFRIRSTAAFAIHKFFQENNYVYVTTPIITSNDAEGAGEQFVVT-VNEDKDYANDFF 186

Query: 196 ------QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
                     Q      A  F   +   P FR E+  + +   EF+ ++ E++F + +D 
Sbjct: 187 GKKASLTVSGQLNGEAFAQAFKNIYTFGPTFRAENSHTTKHASEFWMIEPEVAFADINDN 246

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLR 276
           +  M+++L+ V       N     FL+
Sbjct: 247 IQLMQDMLKSVVGYVLEKNMTELEFLQ 273


>gi|296328451|ref|ZP_06870972.1| lysine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296154417|gb|EFG95214.1| lysine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 493

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 114/255 (44%), Gaps = 21/255 (8%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLCIDGLV 77
           + +G +  +R  G + F  I D  G  Q+    D    E    I K +    ++ ++G +
Sbjct: 57  KTAGRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNVGDIIGLEGEL 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                E         ++ L  + I +L+     LP    G  +    IR++ R++DL  +
Sbjct: 117 FITHTE---------ELTLRVKSIALLTKNVRSLPEKYHGLTDV--EIRYRKRYVDLIMN 165

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
             + +  +KRT+II ++R  +    F+E  TPI+        A+ F+          + L
Sbjct: 166 PEVRETFIKRTKIIKAIRKYLDDRGFLEVETPIMHPILGGAAAKPFITHHNTLNIDLF-L 224

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+R + +   FR+E   +   P EF  +++  +  + +D+++  E
Sbjct: 225 RIAPELYLKKLIVGGFERVYDLNRNFRNEGISTRHNP-EFTMVELYQAHADFNDMMDLCE 283

Query: 255 NVLRGVFEEFSNGNT 269
            ++  V +E  NG T
Sbjct: 284 GIISSVCQEV-NGTT 297



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL GA ++R+V LFP
Sbjct: 452 ALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILFP 487


>gi|104773527|ref|YP_618507.1| lysyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116513522|ref|YP_812428.1| lysyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|103422608|emb|CAI97211.1| Lysyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116092837|gb|ABJ57990.1| Lysyl-tRNA synthetase (class II) [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 501

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 151/358 (42%), Gaps = 49/358 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      ++I K       L ++G V
Sbjct: 60  TKIAGRMLAKRGKGKVGFADLYDRSGKIQIYVRKDMVGEENYQIFKKADLGDFLGVEGEV 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RR 135
                        +G++ + AQ +  LS A   LP    G ++  ESI ++ R+LDL   
Sbjct: 120 FKTD---------SGELSVRAQHVTFLSKALRPLPDKYHGLKDV-ESI-YRQRYLDLITN 168

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
              ++  V RT+II ++R  +  ++F+E  TP+L  + P G  AR F+        + Y 
Sbjct: 169 HESYQRFVNRTKIIQAIRDYLNGQDFLEVETPVLH-NIPGGAEARPFITHHNALDINLYM 227

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                   K+L++    +R ++I   FR+E       P EF +L+   ++ +  D+++  
Sbjct: 228 RIALELPLKRLIVGD-MERVYEIGRVFRNEGMDLKHNP-EFTELETYAAYYDFHDVMDEA 285

Query: 254 ENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTD--KP----DLRNPI 297
           E ++R   +  S    ++           F R+   D I+   G D  +P    + R   
Sbjct: 286 EGIIRAAAKVVSEDGKINYQGTDLDLGKPFRRVHMVDLIKELTGVDFWQPMTLEEARKVA 345

Query: 298 IMHNV-------TEHFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGNRAFCDR 343
             H+V         H +++ F  F +   V+P    G+ V   P AK    +  F DR
Sbjct: 346 AEHHVEVEPYWQVGHIINAFFEKFGEKTIVDPTFVYGHPVEVSPLAKKNADDPRFTDR 403



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 453 RAMEYGMPPTGGLGIGIDRLVMLLTNAASIRDVLLFP 489


>gi|308189992|ref|YP_003922923.1| asparagine--tRNA ligase [Mycoplasma fermentans JER]
 gi|307624734|gb|ADN69039.1| asparagine--tRNA ligase [Mycoplasma fermentans JER]
          Length = 454

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 149/357 (41%), Gaps = 61/357 (17%)

Query: 11  DLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSA 57
           D+  SD+ S            + +  WV   R +  I F+ I D   +   QV    +  
Sbjct: 2   DMATSDIKSLFEKSKEFKNKTLEIKAWVTSNRGNKKIRFISINDGSTVQSLQVTCKGEKF 61

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F+    +     + + G+V    A T  A      +EL A K+++L  A+ L  P+  +
Sbjct: 62  DFDKLDQIHLGAAVEVKGIV----ALTPKAQ---QPLELVATKVKLLRDAD-LDFPIQKQ 113

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE-----CSTPILTAS 172
               E++R      D+       N+++ T +I S   + + + F E      + PI+T++
Sbjct: 114 GINLETLR------DIPHVRHRTNLLRATMLIRSTLAKEVHKYFDEHGYLYFNAPIITSN 167

Query: 173 SPEGARD-FLVPSRVNQGSFYALPQAPQQYKQLLMAS----GFDRYFQIAPCFRDEDPRS 227
             EGA + F+V    ++  F+   +A       L A     GF + +  AP FR E   +
Sbjct: 168 DGEGAGETFVVNDENSKDPFFGTRKATLGVTGQLHAESYAIGFKKVYTFAPTFRAEHSNT 227

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE--------EFSNGN-TVS------- 271
            +   EF+ ++ E++F E  D +   +++L+ V +        EF   N TV        
Sbjct: 228 KKHAAEFWMIEPEVAFYELKDAIKLADDMLKSVIKNTIKKHPAEFKFLNETVDKGLLERL 287

Query: 272 NNFLR-----ICYDDAIRRYGTDKPDLRNPII---MHNVTEHFVHSEFRVFSKILSV 320
           N+FL+     I Y DAI+     K    N  I   +   TEH  +   ++F+  ++V
Sbjct: 288 NHFLKTKLSVIDYRDAIKELAKVKDQFENQDIEFGLDLATEHERYISEKIFNGPVAV 344


>gi|291458160|ref|ZP_06597550.1| asparagine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291419243|gb|EFE92962.1| asparagine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 520

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 106/257 (41%), Gaps = 29/257 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           + + GWV   R      FL I D    T  QVV + D   F EIAK      V+    LV
Sbjct: 79  ITVGGWVRSNRDSKSFGFLVISDGSFFTPLQVVYHEDLENFPEIAKLGVGAAVIVKGKLV 138

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           EL A+ + I   +     P+  +R   E +R     L  R +T
Sbjct: 139 ATPEAKQ--------PFELQAESVSIEGPSSP-DYPLQKKRHTLEYLR-SIPHLRPRTNT 188

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPS-------RVNQG 189
           L      R+ I  ++        F+   TPI+TAS  EGA + F V +       R  +G
Sbjct: 189 LQAVFRIRSLIAFAIHRFFQERGFVYVHTPIITASDAEGAGEMFQVTTLDLDQLPRTEEG 248

Query: 190 -----SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 F+    +     QL     A  F   +   P FR E+  + R   EF+ ++ EM
Sbjct: 249 VDYGADFFGKKTSLTVSGQLNGESFAQAFRNIYTFGPTFRAENSNTQRHAAEFWMIEPEM 308

Query: 242 SFVEQDDILNTMENVLR 258
           +F E  DI++T E++L+
Sbjct: 309 AFAELSDIMDTAEDMLK 325



 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + +L     +G+  E    RF    R F  G   HGG   G +R VM 
Sbjct: 443 EIIGGSQREEDYDRLLSRMEELGMDIEAY--RFYLDLRRF--GTTRHGGFGLGFERAVMY 498

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G +N+R+V  FP +   C++
Sbjct: 499 LTGMQNIRDVLPFPRTVGNCEI 520


>gi|255731806|ref|XP_002550827.1| hypothetical protein CTRG_05125 [Candida tropicalis MYA-3404]
 gi|240131836|gb|EER31395.1| hypothetical protein CTRG_05125 [Candida tropicalis MYA-3404]
          Length = 483

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 118/264 (44%), Gaps = 36/264 (13%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRD---HYGITQVVANPDSACFEIAKS--VRSEW 69
           + VGS +   G+V  +R    + F+DI D   H  +  V+   +   F++ +S  V+ EW
Sbjct: 32  AKVGSIIEARGFVKSIRTSKKVGFVDISDGSIHKNLNIVLQGSEQPKFKVGQSIIVKGEW 91

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKY 128
                           N +           KI IL  V E+ PL     ++   S+ F  
Sbjct: 92  CQGKGTQPFELKYNPKNPD----------HKITILGDVTEDYPL-----QKKSTSMPFLR 136

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMI----AENFIECSTPILTASSPEGARD-FLVP 183
            F +L+  T    +    R+ + M  +++     ++FI+ + P++T+S  EGA + F V 
Sbjct: 137 TFPELKHRT--NTLASFLRLRSHMEFKLMEFFQQQDFIKVTPPLITSSDCEGAGEVFSVH 194

Query: 184 SRVNQ------GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           S  ++      G    L  + Q + + L A   +R + + PCFR E   + R   EF+ L
Sbjct: 195 SASDKPNEKFFGKNAYLTVSTQLHLECL-ALALNRAWTLTPCFRAEQSNTTRHLSEFWML 253

Query: 238 DMEMSFVEQ-DDILNTMENVLRGV 260
           + E+S V+    + N +E+++R V
Sbjct: 254 EAEISHVDSVHQVTNFIEDMVRYV 277



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 5/90 (5%)

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           +DL+   F E+A G +R H  EV+ +   +  +  + ++  +  L R    G  PHGG  
Sbjct: 397 FDLLVPEFGELAGGSLREHDYEVLKKNLEDHQMDMQDMD-WYLNLRRQ---GTVPHGGFG 452

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R++  L G  NVR+VS FP + + C+
Sbjct: 453 LGFERMITFLAGYDNVRDVSAFPRAPDLCN 482


>gi|146322444|ref|XP_750194.2| lysyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|129557020|gb|EAL88156.2| lysyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
          Length = 566

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 34/231 (14%)

Query: 102 EILSVAEELP---------LPVFGERE----YPESIRFKYRFLDLRRDTLHKNIVK-RTR 147
           E+  +A ELP         +PV  E      YP  ++F         D    +I++ R+ 
Sbjct: 181 ELTVLATELPRLLAPCLHDVPVDAEEHETSPYPRHVQFLA-------DQKAADIIRARSA 233

Query: 148 IINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
           II  +R   +  +F+E STPI+ + +    AR F   +        +L  AP+ + + L+
Sbjct: 234 IIQFLRQFFLDRSFMEVSTPIIGSIAGGAIARPFQTSATEFPDRQLSLRIAPELWLKRLV 293

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV---FEE 263
             GFD+ F+I P FR+E       P EF   +   ++   +D+++  EN+L G+    +E
Sbjct: 294 VGGFDKVFEIGPSFRNEGLDKTHNP-EFTTCEFYHAYANLEDLMSITENLLSGMAAHIQE 352

Query: 264 FSNGNTV-------SNNFLRICYDDAIR-RYGTDKPDLRNPIIMHNVTEHF 306
           F+   ++       S  F R+ +   I  + G   PDL  P  +  V++ F
Sbjct: 353 FNKNASLKPPEVDFSAPFRRVDFTTGIEGKIGRRLPDLTTPDALDQVSQLF 403


>gi|66357294|ref|XP_625825.1| lysyl-tRNA synthetase (NOB+tRNA synthetase) [Cryptosporidium parvum
           Iowa II]
 gi|46226895|gb|EAK87861.1| lysyl-tRNA synthetase (NOB+tRNA synthetase) [Cryptosporidium parvum
           Iowa II]
          Length = 559

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 23/261 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKS-V 65
           G  D  + + LSG V  +R     +IF DI       Q++AN       +  F ++ S +
Sbjct: 89  GYIDKDTTLSLSGRVTSIRSSSSKLIFYDIFCEEQKVQIIANIMEHDISTGEFSVSHSEI 148

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESI 124
           R   V+   G                G++ L ++ + +LS     LP  + G ++  + +
Sbjct: 149 RRGDVVGFTGFPGKSK---------RGELSLFSKSVVLLSPCYHMLPTAISGLKD--QEV 197

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182
           R++ R+LDL  +   + + K R+R I  +R       F+E  TP+L        AR F+ 
Sbjct: 198 RYRQRYLDLMLNEESRKVFKLRSRAIKYIRNYFDRLGFLEVETPMLNMIYGGAAARPFIT 257

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                +   Y +  AP+ Y + L+  G D+ ++I   FR+E       P EF  ++  M+
Sbjct: 258 YHNELETQLY-MRIAPELYLKQLIVGGLDKVYEIGKNFRNEGIDLTHNP-EFTAMEFYMA 315

Query: 243 FVEQDDILNTMENVLRGVFEE 263
           + +  D+++  E ++ G+  E
Sbjct: 316 YADYYDLMDLTEELISGLVLE 336



 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 26/40 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG   GIDR++M L    N++EV LFP  +N
Sbjct: 506 ALEHGLPPTGGWGLGIDRLIMFLADKNNIKEVILFPAMRN 545


>gi|283780925|ref|YP_003371680.1| asparaginyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283439378|gb|ADB17820.1| asparaginyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 462

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 109/266 (40%), Gaps = 26/266 (9%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +G    + GWV   R   GG  F+++ D    G  QV+A+   A +E      SE     
Sbjct: 14  IGKQAIIRGWVRTRRDSKGGFSFIEVNDGSSLGGLQVIADATLANYE------SEVKKLT 67

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  ++ + E   +       EL A  +E+   A+    P+  ++   E +R ++  L  
Sbjct: 68  TGSSVTIAGEIKPSGGKGQATELLASSVEVHGWADAEAYPLQKKQHSLEKLR-EWAHLRP 126

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL------------ 181
           R +T       R  I  S+      + F+  +TPI+TAS  EGA                
Sbjct: 127 RTNTFGAVARLRNCISRSIHNFFQEDGFLYVNTPIITASDCEGAGAMFRVTTLDLEKLPK 186

Query: 182 VPSRV-NQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           V  +V N   F+  P       QL   + A    + +   P FR E+  + R   EF+ +
Sbjct: 187 VDGKVDNSQDFFQKPAYLTVSGQLEGEIFACALGKIYTFGPTFRAENSNTSRHLAEFWMV 246

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEE 263
           + E++F + DD +   E  L+ +F +
Sbjct: 247 EPEVAFNDLDDNMTLAERFLKRMFSD 272


>gi|255020529|ref|ZP_05292593.1| Lysyl-tRNA synthetase (class II) [Acidithiobacillus caldus ATCC
           51756]
 gi|254970049|gb|EET27547.1| Lysyl-tRNA synthetase (class II) [Acidithiobacillus caldus ATCC
           51756]
          Length = 495

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 136/321 (42%), Gaps = 28/321 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RY      +L    V +   L G +   R  G   F D++D  G  Q+  + D    E+ 
Sbjct: 42  RYDQSDAAELDAQAVQA--HLGGRLMSRRIMGKASFADLQDGSGRLQLFFSRD----ELG 95

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +   +++     G V+    +       TG++ L      +L+ A   PLP         
Sbjct: 96  EDAYAQFKELDLGDVIGVGGQLFRTK--TGELSLRVASFTLLAKALR-PLPEKWHGLSDP 152

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RD 179
             RF+ R++DL   ++  +    R++ + ++R  +  + FIE  TP++    P GA  R 
Sbjct: 153 ETRFRQRYVDLIVTESTRRTFRIRSQTVAALRAVLSNDGFIEVETPMMQ-PIPGGATARP 211

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+        + Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  L+ 
Sbjct: 212 FITHHHALDMTLY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMLEW 269

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNT----------VSNNFLRICYDDAIRRYGTD 289
             ++ +    ++  E ++R    + + G+T          +   F R+   +A+RRY  D
Sbjct: 270 YEAYADYTMAMDRCETLIRAA-AQAALGSTDIHYQGLAIHLGEPFARLGVAEAVRRYHPD 328

Query: 290 --KPDLRNPIIMHNVTEHFVH 308
               +LR+  I+ +      H
Sbjct: 329 LAHKNLRDAGILGDKLRELGH 349



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  +     F     +KE  +     F   Y RA + GMPP 
Sbjct: 402 RFELFIAGRELANGFSELNDPDDQAARFRAQVAAKEAGDEEAMFFDADYIRALEYGMPPT 461

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  G+DR+VMLL    ++REV LFP
Sbjct: 462 AGVGLGVDRLVMLLADQPSIREVILFP 488


>gi|254281891|ref|ZP_04956859.1| asparaginyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678094|gb|EED34443.1| asparaginyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 465

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 130/321 (40%), Gaps = 48/321 (14%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRD--HYGITQ-VVANPDSACFEIAKSVRSEWVLC 72
           +G+ V   GW+   R    GI FL I D  H+   Q VVAN          +  +E +  
Sbjct: 17  IGTTVTAKGWLRSKRDSKAGISFLAIHDGSHFDALQSVVAN-------TLTNYDTEVLPL 69

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFL 131
             G  ++ + E + +      +E+ A ++E++  V +    P+  +R   E +R +    
Sbjct: 70  STGCAVAVTGELVASQGKGQTVEIQASQVEVIGGVDDPEAYPIAKKRHSFEYLRTQAH-- 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            LR  T     + R R + +     +   E F   +TPI+TAS  EGA +     RV+  
Sbjct: 128 -LRPRTNTFGAITRIRHVAAQAIHELFSREGFYWVNTPIITASDCEGAGELF---RVSHL 183

Query: 190 SFYALPQAP-------QQY---KQLLMASG----------FDRYFQIAPCFRDEDPRSDR 229
            +  LP+ P       Q +   +  L  SG            + +   P FR E+  + R
Sbjct: 184 DWNNLPRKPDGSVDQSQDFFGDEAFLTVSGQLALESHCLAMSKVYSFGPTFRAENSHTSR 243

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
              EF+ ++ E++F + +D     E +L+ V     +   V   F     DD +      
Sbjct: 244 HLAEFWMVEPEIAFADLNDNAELAERLLKHVIARVLDRCEVDMAFFEQRIDDTV------ 297

Query: 290 KPDLRNPIIMHNVTEHFVHSE 310
              LRN  I+ N  E   ++E
Sbjct: 298 ISRLRN--ILDNAFERMTYTE 316


>gi|303325874|ref|ZP_07356317.1| asparagine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302863790|gb|EFL86721.1| asparagine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 454

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 104/270 (38%), Gaps = 21/270 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L      + + + GWV   R   G  F++I D   +   Q + +  +      
Sbjct: 3   RTLIIDALNAEKAQNAITICGWVRTRRDAKGFSFVEINDGSCLANMQCIVDEGTEAHAAL 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEELPLPVFGEREYP 121
               +   L + G ++    +        GQ  E+ A+ + +  +A+    P+  +R   
Sbjct: 63  GEANTGAALAVVGELVPSPGK--------GQTWEVRAKSVTVFGLADTETFPLQKKRHSD 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF- 180
           E +R     L  R +        R+    ++        F    TP+LT S  EGA +  
Sbjct: 115 EFLR-GIAHLRARTNKYGAAFRIRSEAGRAVHDFFHGRRFAWVHTPVLTGSDCEGAGEMF 173

Query: 181 ----LVPSRVN-QGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               L P   N  G F+  P       Q +   +A G  R +   P FR E+  + R   
Sbjct: 174 RVTTLAPGEKNTDGDFFNRPCNLTVSGQLEAEALALGLGRVYTFGPTFRAENSNTPRHAA 233

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           EF+ ++ EM+F +  D++   E++ R V E
Sbjct: 234 EFWMIEPEMAFADLSDLMELGESLTRHVIE 263


>gi|288817495|ref|YP_003431842.1| lysyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288786894|dbj|BAI68641.1| lysyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751102|gb|ADO44585.1| lysyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 567

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 10/233 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VRL+G +  +R  G  IF  ++D  G  Q+    D    E  K     + L     V+ R
Sbjct: 131 VRLAGRLVSLRSMGKAIFGHLQDATGKVQIYIKKDVVGDEKFKVFDDLFDLGDVIGVVGR 190

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
              T      TG++ +  Q  ++L+ +   PLP          +R++ R+LDL  +   +
Sbjct: 191 LFRTS-----TGELTVEVQDFKMLAKSLH-PLPEKWHGLKDVEVRYRQRYLDLISNEKAR 244

Query: 141 NI-VKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAP 198
            I + R+++++ +R  +    FIE  TP+L   +S   A+ F+      + + Y L  AP
Sbjct: 245 RITLLRSKLLSEIRKFLEERGFIEAETPVLQHIASGANAKPFITYHNYLEQNLY-LRIAP 303

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + Y + L+  GF+R +++   FR+E   +   P EF  L+   ++ +  D++ 
Sbjct: 304 ELYLKRLIVGGFNRVYELGKNFRNEGVDTTHNP-EFTMLEFYCAYWDYKDLME 355



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G   GIDR+VMLL    ++REV LFP
Sbjct: 527 ALEYGMPPTAGEGIGIDRLVMLLADVDSIREVILFP 562


>gi|319903118|ref|YP_004162846.1| lysyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319418149|gb|ADV45260.1| lysyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 576

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 128/283 (45%), Gaps = 23/283 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV    D  C E  K + +     +  L    
Sbjct: 55  VSVAGRMMSRRVMGKASFIELQDSKGRIQVYITRDDICSEEDKEMYNTVFKRLLDLGDFI 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             E        G+I + A+K+ +L+ + + PLP+        +   E PE +R++ R++D
Sbjct: 115 GIEGFVFRTQMGEISIHAKKLTVLAKSLK-PLPIVKYKDGVAYDSFEDPE-LRYRQRYVD 172

Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L   D + +  +KR+ II ++R  +    + E  TPIL + +    AR F          
Sbjct: 173 LIVNDGVKETFLKRSTIIKTLRAALDEAGYTEVETPILQSIAGGASARPFTTHHNSLDID 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ + + + + ++
Sbjct: 233 LY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-EFTCMELYVQYKDYNWMM 290

Query: 251 NTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
           +  E +L        G  E   +G T+S    + R+   +AIR
Sbjct: 291 SFTEKLLERICIAVNGCPETEIDGKTISFKAPYRRLPILEAIR 333



 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A Q GMPP  GI  GIDR+ ML+ G   ++EV  FP
Sbjct: 460 KALQYGMPPTSGIGIGIDRLTMLMTGKAFIQEVLFFP 496


>gi|229076061|ref|ZP_04209029.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|229099019|ref|ZP_04229953.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229118050|ref|ZP_04247409.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228665273|gb|EEL20756.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228684247|gb|EEL38191.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228706924|gb|EEL59129.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 463

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 132/320 (41%), Gaps = 55/320 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V     ++
Sbjct: 21  VQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSSVKVEGKVI 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A+KI+I  +++    P+  +R   E +R       LR  T
Sbjct: 81  ATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHLRPRT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARD-FLVPSR----VNQGS 190
              +   R R I +       +   F+   TPI+T S  EGA + F V ++    V++G 
Sbjct: 129 NAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVSKGE 188

Query: 191 FYALPQAPQ------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
              + ++              Q      A  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 DGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMVE 248

Query: 239 MEMSFVEQDDILNTMENVLR--------------GVFEEFSN-------GNTVSNNFLRI 277
            E++F E  D+++  E++L+                F  F +        N ++++F RI
Sbjct: 249 PEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVINSDFGRI 308

Query: 278 CYDDAIRRYGTDKPDLRNPI 297
            Y +AI+       D + P+
Sbjct: 309 TYTEAIKVLQESGADFKYPV 328


>gi|170579277|ref|XP_001894758.1| lysyl-tRNA synthetase [Brugia malayi]
 gi|158598519|gb|EDP36395.1| lysyl-tRNA synthetase, putative [Brugia malayi]
          Length = 597

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 108/232 (46%), Gaps = 21/232 (9%)

Query: 34  GGIIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCIDGL-VMSRSAETINA 87
           G +IF D+       QV+AN      D +   +   ++   ++ ++G    S+S E    
Sbjct: 147 GKLIFYDLHGEGTRLQVLANARFHSGDESFDSLHDRIKRGDIIGVNGYPARSKSGE---L 203

Query: 88  NIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRT 146
           +II  +I      +++      LP   FG +   +  R++ R+LDL  +T  KN  V R+
Sbjct: 204 SIIPREI------VQLTPCLHMLPHTHFGLKN--QETRYRMRYLDLIMNTDVKNKFVTRS 255

Query: 147 RIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
           R I+ +R  +    F+E  TP++   +    A+ F+          Y L  AP+ Y ++L
Sbjct: 256 RTISFLRRYLDNLGFLEVETPMMNLIAGGATAKPFITHHNDLDMDLY-LRVAPELYLKML 314

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           +  G DR ++I   FR+E       P EF   +  M++ + +D++   E++L
Sbjct: 315 VVGGIDRVYEIGRVFRNEGIDQTHNP-EFTTCEFYMAYADYEDLMKITEDML 365



 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M+L  + N++EV  FP
Sbjct: 544 ALEYGLPPTAGWGIGIDRLTMILTDSNNIKEVLFFP 579


>gi|254527072|ref|ZP_05139124.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221538496|gb|EEE40949.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 512

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 26/284 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR------SEWVLCID 74
           V L+G V   R  G I F  I D  G  Q+  +       + K          E V   D
Sbjct: 53  VSLAGRVMAKRVMGKIAFFTISDQEGQIQLYLDKRIINLNLEKQKLLSFEDIKEIVDIGD 112

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            + +  + +  N     G++ +  +K E+LS + + PLP           R++ R+LDL 
Sbjct: 113 WIGVYGTIKKTNK----GELSIKVEKWEMLSKSLQ-PLPDKWHGLTDIEKRYRQRYLDLI 167

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            +   KN+ K R + I+ +R  +   NF+E  TPIL + +    AR F+          Y
Sbjct: 168 VNPNSKNVFKTRAKCISFIRKWLDNRNFLEIETPILQSEAGGAEARPFITHHNTLDIPLY 227

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + + + ++  GF++ +++   FR+E   +   P EF  +++  ++ +  D++N 
Sbjct: 228 -LRIATELHLKRMVVGGFEKVYELGRIFRNEGISTRHNP-EFTSVEIYEAYSDYFDMMNL 285

Query: 253 MENVLRGVFEEFSNGNTV----------SNNFLRICYDDAIRRY 286
            E +++ V  + S G+ +          S  +LRI   D +++Y
Sbjct: 286 TEELIKDVVAD-SCGSLIINYQNKEIDFSKPWLRISMKDIVKKY 328



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR++ML+  + ++R+V  FP+
Sbjct: 457 ALEIGMPPTGGLGIGIDRLIMLITNSASIRDVIPFPL 493


>gi|325684702|gb|EGD26856.1| lysine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 507

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 151/358 (42%), Gaps = 49/358 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      ++I K       L ++G V
Sbjct: 60  TKIAGRMLAKRGKGKVGFADLYDRSGKIQIYVRKDMVGEENYQIFKKADLGDFLGVEGEV 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RR 135
                        +G++ + AQ +  LS A   LP    G ++  ESI ++ R+LDL   
Sbjct: 120 FKTD---------SGELSVRAQHVTFLSKALRPLPDKYHGLKDV-ESI-YRQRYLDLITN 168

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
              ++  V RT+II ++R  +  ++F+E  TP+L  + P G  AR F+        + Y 
Sbjct: 169 HESYQRFVNRTKIIQAIRDYLNGQDFLEVETPVLH-NIPGGAEARPFITHHNALDINLYM 227

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                   K+L++    +R ++I   FR+E       P EF +L+   ++ +  D+++  
Sbjct: 228 RIALELPLKRLIVGD-MERVYEIGRVFRNEGMDLKHNP-EFTELETYAAYYDFHDVMDEA 285

Query: 254 ENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTD--KP----DLRNPI 297
           E ++R   +  S    ++           F R+   D I+   G D  +P    + R   
Sbjct: 286 EGIIRAAAKVVSEDGKINYQGTDLDLGKPFRRVHMVDLIKELTGVDFWQPMTLEEARKVA 345

Query: 298 IMHNV-------TEHFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGNRAFCDR 343
             H+V         H +++ F  F +   V+P    G+ V   P AK    +  F DR
Sbjct: 346 AEHHVEVEPYWQVGHIINAFFEEFGEKTIVDPTFVYGHPVEVSPLAKKNADDPRFTDR 403



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 453 RAMEYGMPPTGGLGIGIDRLVMLLTNAASIRDVLLFP 489


>gi|325847832|ref|ZP_08170054.1| asparagine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480850|gb|EGC83903.1| asparagine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 462

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 123/318 (38%), Gaps = 51/318 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFE-IAKSVRSEWVLCIDGLV 77
           +   GW+ + R    + F+++ D   +   QVV   D   FE I K   S  +  I  LV
Sbjct: 18  ITAQGWIRQARFTKNVGFIELNDGTIFKNLQVVVGKDLENFESIQKEHLSASLKVIGKLV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            + +A+           EL A K+E+L  ++E   P+  +++  E +R     L +R +T
Sbjct: 78  KTNNAKQA--------YELQANKVEVLGHSDE-NFPIQKQKQSLEYMR-TIPHLRVRTNT 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+++  ++        FI  + P++TAS  EGA +    +  N          
Sbjct: 128 YRAVFRLRSKLAYALHKFFQEREFIYLNAPLITASDTEGAGEMFQVTTQNLEKPNLDKDG 187

Query: 198 PQQY-------KQLLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              Y       K  L  SG              +   P FR E+  + R   EF+ L+ E
Sbjct: 188 KVDYSKDFFGKKSYLTVSGQLEAEDYALALSNIYTFGPTFRAEESNTPRHAAEFWMLEPE 247

Query: 241 MSFVEQDDILNTMENVLRGVFE----------EFSNG----------NTVSN-NFLRICY 279
           ++F + +  ++  E +++ + E          EF N             V N  F RI Y
Sbjct: 248 LAFADYNVCMDVAEEMMKYMIEYVLENCKDEIEFFNERIDDTLIERLTKVKNAKFARITY 307

Query: 280 DDAIRRYGTDKPDLRNPI 297
            DAI +      D   P+
Sbjct: 308 TDAIEKLKNADVDFEYPV 325



 Score = 37.0 bits (84), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 5/98 (5%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
           + ND  ++ AF   LV    E+  G  R    + ++++  + G+  +  +N         
Sbjct: 364 RNNDGKTVAAFDM-LVPAVGELIGGSQREERYDELVKSMEDNGLKIDEYQNYLD----LR 418

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + G   H G   G +R VM L G KN+R+V  +P + N
Sbjct: 419 KYGTVVHSGYGLGFERAVMYLTGMKNIRDVIPYPRTVN 456


>gi|47459342|ref|YP_016204.1| asparaginyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|59798538|sp|Q6KHD7|SYN_MYCMO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|47458672|gb|AAT27993.1| asparaginyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 447

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 106/243 (43%), Gaps = 14/243 (5%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +  WV   R +  I F++I D   I   QVV   +   F     +R    + + G++   
Sbjct: 21  IKAWVASNRGNTNIRFVEINDGSTIKNLQVVIKKEIMSFLEVDKIRLGAAIHVKGVLKYT 80

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                    +  +IEL+A K  +L   +E   P+  +    E++R +   L  R  TL  
Sbjct: 81  PG-------MAQEIELNADKFILLKNTDE-DFPIQKKETSLEALR-EIPHLRHRTTTLRA 131

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY---ALPQA 197
            ++ R+ +   +        ++  S+PI+T +  EGA +  V    ++  F+   A    
Sbjct: 132 IMLIRSTLALEIHKFYNERGYLWVSSPIITGNDGEGAGESFVVDDESKDFFFNKKATLGV 191

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
             Q      A GF + +  AP FR E+  + +   EF+ ++ E++F +  D++   +++L
Sbjct: 192 TGQLHAEAYALGFSKVYTFAPTFRAENSNTTKHAAEFWMMEPEVAFFDLKDLIKMSDDML 251

Query: 258 RGV 260
           R V
Sbjct: 252 RQV 254


>gi|322385813|ref|ZP_08059456.1| lysine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321270098|gb|EFX53015.1| lysine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 496

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  I+D  G  Q+    D      +EI K       L I+G VM 
Sbjct: 65  IAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDEVGEENYEIFKKADLGDFLGIEGDVMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A  I  LS A   PLP  F      E+I ++ R+LDL   R+
Sbjct: 125 TD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKRYLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     Q     L  
Sbjct: 174 SFER-FVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQDIMDLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|282933691|ref|ZP_06339049.1| lysine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|281302181|gb|EFA94425.1| lysine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 507

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 21/272 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F DI D  G  Q+    D      ++I K       L I+G V
Sbjct: 60  TKIAGRMMAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYQIFKKSDLGDFLGIEGEV 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDLRRD 136
           M            TG++ + A  +  LS A   PLP  +   +  E I ++ R+LDL  +
Sbjct: 120 MKTD---------TGELTVRAHHVTFLSKALR-PLPDKYHGLQNVEQI-YRQRYLDLMTN 168

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
              +   V RT+II ++R  +   +F+E  TP+L  + P G  AR F+          Y 
Sbjct: 169 HDSYMRFVHRTKIIQAIRDYLNNRDFLEVETPVL-HNIPGGAEARPFITHHNALDIDLY- 226

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  A +   + L+  G +R ++I   FR+E   +   P EF +L+   ++ +  D+++  
Sbjct: 227 LRIALELPLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTELETYCAYWDFHDVMDEA 285

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           E +++   +  ++   V+     I      RR
Sbjct: 286 EGIIKAAAKVVTDDGKVNYQGTEIDLGKPFRR 317



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 453 RALEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 489


>gi|260591211|ref|ZP_05856669.1| asparagine--tRNA ligase [Prevotella veroralis F0319]
 gi|260537076|gb|EEX19693.1| asparagine--tRNA ligase [Prevotella veroralis F0319]
          Length = 463

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 115/275 (41%), Gaps = 34/275 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  +D G  + + GWV   R    + F+ + D   I   QVV +P +   E  
Sbjct: 3   RTKVVDALACTDFGKDINVKGWVRSHRSSKAVDFIALNDGSTIKNIQVVVDPTTIEEEKL 62

Query: 63  KSVRSEWVLCIDG-LVMSRSAETINANIITGQI-ELSAQKIEILSVA-EELPLPVFGER- 118
           KS+ +   + + G LV S+ A         GQ  E+  ++IEI  +   + P+   G+  
Sbjct: 63  KSITTGACISVIGTLVESQGA---------GQTSEIQCKEIEIYGLCPSDYPMQKKGQSF 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           EY      KY  + LR +T       R  +  ++        +    TP++T S  EGA 
Sbjct: 114 EYMR----KYGHMRLRTNTFGAVFRIRHNMAIAIHKYFHDHGYYYFHTPLITGSDAEGAG 169

Query: 179 DFLVPSRVN------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDE 223
           +    + ++               F+          QL   L A+     +   P FR E
Sbjct: 170 NMFQVTTLDLDRIAKNGEVDYSADFFGKRTNLTVSGQLEGELGATSLGAIYTFGPTFRAE 229

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +  + R   EF+ ++ E++F+++D++++  E+ ++
Sbjct: 230 NSNTPRHLAEFWMVEPEVAFIDKDELMDLEEDFIK 264



 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + +L    N G+ +EV    +       + G  PHGG   G +R+++ 
Sbjct: 386 EIIGGSVREENYDKLLAEIDNRGMKREV----YDWYLDTRKYGTCPHGGFGLGFERLILF 441

Query: 550 LLGAKNVREVSLF 562
           + G +N+R+V  F
Sbjct: 442 VTGMQNIRDVIPF 454


>gi|41582254|gb|AAS07872.1| lysyl-tRNA synthetase [uncultured marine bacterium 580]
          Length = 480

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 112/248 (45%), Gaps = 13/248 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V +SG +   R  G   F  I+D+ G  Q+    D    +    + +++     G +
Sbjct: 38  GIEVSVSGRMMLKRVMGKASFASIQDNKGRIQLYVARDFINSDDNPELYAQFKKWDLGDI 97

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL--R 134
           +    +       T   EL+ +  EI+ + + + PLP        +  +++ R++DL   
Sbjct: 98  VGAKGKLFK----TRTNELTIEVTEIVLLTKSIRPLPEKFHGLSDQETKYRQRYVDLIVN 153

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFY 192
            DT  K  + R++II++MR  M    F+E  TP+L    P GA  R F           Y
Sbjct: 154 EDT-KKTFLNRSKIISNMRAFMEEHEFLEVETPML-HPIPGGATARPFETHHNALDMDMY 211

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++   ++ E   ++N 
Sbjct: 212 -LRIAPELYLKRLVVGGFDRVFEINRNFRNEG-LSVRHNPEFTMMEFYAAYTEYKWLMNF 269

Query: 253 MENVLRGV 260
            E+ +R V
Sbjct: 270 TEDCIRDV 277



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+G    + +E   + F     +K+  +           RA + G+PP 
Sbjct: 389 RFELFIAGREIANGFSELNDAEDQAKRFQMQVAAKDAGDEEAMYYDADFVRALEYGLPPT 448

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 449 GGCGVGIDRLVMLLTDSPSIRDVILFP 475


>gi|302023490|ref|ZP_07248701.1| lysyl-tRNA synthetase [Streptococcus suis 05HAS68]
          Length = 496

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 19/261 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
           +Y   S  DL   ++G    ++G +   R  G   F  I+D  G  Q+    D      +
Sbjct: 47  QYEDKSKEDL--EELGQTAIIAGRIMTKRGKGKAGFAHIQDREGQIQIYVRKDDVGEENY 104

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           EI K       + ++G V   +          G++ + A+K+  LS A   PLP      
Sbjct: 105 EIFKKADLGDFIGVEGDVFKTNV---------GELSIHARKLTHLSKALR-PLPEKFHGL 154

Query: 120 YPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                R++ R+LDL   R++  +  V R++II+ +R  +    F+E  TP+L   +   A
Sbjct: 155 TDIETRYRKRYLDLITNRESFDR-FVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAA 213

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
               +     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +
Sbjct: 214 ARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSI 272

Query: 238 DMEMSFVEQDDILNTMENVLR 258
           ++  ++ +  DI++  E +++
Sbjct: 273 EVYQAYADYLDIMDLTEGIIQ 293



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L+ F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LERFEAQAKAKELGDDEATGVDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|255011239|ref|ZP_05283365.1| lysyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313149051|ref|ZP_07811244.1| lysyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313137818|gb|EFR55178.1| lysyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 575

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 137/295 (46%), Gaps = 43/295 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F++++D  G  QV    D  C     E+  +V    +     +
Sbjct: 55  VSVAGRMMSRRVMGKASFIELQDSKGRIQVYITRDDICPGEDKEMYNTVFKRLLDLGDFI 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I+G V              G+I + AQK+ +L+ + + PLP+        +   E PE 
Sbjct: 115 GIEGFVFRTQ---------MGEISIHAQKLTVLAKSIK-PLPIVKYKDGVAYDSFEDPE- 163

Query: 124 IRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           +R++ R++DL  +   K+I +KR+++ +SMR    ++ ++E  TPIL A +    AR F+
Sbjct: 164 LRYRQRYVDLAVNEGIKDIFMKRSKVYSSMREYFNSKGYMEVETPILQAIAGGAAARPFM 223

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ +
Sbjct: 224 THHNALDIPLY-MRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMEIYV 281

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNT---VSNNFL-------RICYDDAIRRY 286
           ++ + + ++   E ++  +  +  NG T   V +N +       R+   DAI+ +
Sbjct: 282 AYKDYNWMMEFTEKMIEKICLDV-NGTTEVKVGDNIINFKAPYRRVTMLDAIKEH 335



 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+ ML+ G   ++EV  FP
Sbjct: 460 RALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFP 496


>gi|313665428|ref|YP_004047299.1| hypothetical protein MSB_A0558 [Mycoplasma leachii PG50]
 gi|312949202|gb|ADR23798.1| conserved hypothetical protein [Mycoplasma leachii PG50]
          Length = 90

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 9/82 (10%)

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL--LSIKAFQYDLVCN 487
           N F+  W++DFP +E++E+E++   AH+PFTM +   ESL   D+      A+ YDLV N
Sbjct: 8   NEFKLLWVVDFPLFEYSEKEQRYLAAHHPFTMTKP--ESLDTFDVNKKDAIAYAYDLVMN 65

Query: 488 GFEIASGGIRNHMSEVMLQAFS 509
           GFEI  GG+   + E+++  F+
Sbjct: 66  GFEI--GGV---VKELLILKFN 82


>gi|116628954|ref|YP_814126.1| lysyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|311111241|ref|ZP_07712638.1| lysine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|116094536|gb|ABJ59688.1| Lysyl-tRNA synthetase (class II) [Lactobacillus gasseri ATCC 33323]
 gi|311066395|gb|EFQ46735.1| lysine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 504

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 23/248 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      ++I K       L IDG V
Sbjct: 61  TKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIDGEV 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           M            TG++ + A  +  LS A   PLP   +        ++ R+LDL   T
Sbjct: 121 MKTD---------TGELTIRATHVTFLSKALR-PLPNKWDGLKDVEQIYRQRYLDLI--T 168

Query: 138 LHKN---IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
            H++    V RT+II ++R  +  ++F+E  TP+L  + P G  AR F+          Y
Sbjct: 169 NHESYMRFVHRTQIIQAIRNYLNKQDFLEVETPVL-HNIPGGAEARPFITHHNALDIDLY 227

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                    K+L++  G +R ++I   FR+E   +   P EF +L+   ++ +  D+++ 
Sbjct: 228 MRIALELPLKRLIVG-GMERVYEIGRVFRNEGVDTRHNP-EFTELETYAAYWDFHDVMDE 285

Query: 253 MENVLRGV 260
            E ++R  
Sbjct: 286 AEEIIRAA 293



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 454 RAMEFGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 490


>gi|332523099|ref|ZP_08399351.1| lysine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314363|gb|EGJ27348.1| lysine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 496

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 120/263 (45%), Gaps = 23/263 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
           +Y   +  DL   D+     ++G +   R  G + F  I+D  G  Q+    D+     +
Sbjct: 47  KYAEKTKEDL--HDLNETAIIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGEENY 104

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLP-VFGE 117
           +I K       L ++G VM            T   ELS +   +  +++ L PLP  F  
Sbjct: 105 DIFKKADLGDFLGVEGEVMR-----------TDMGELSIKATHLTHLSKSLRPLPEKFHG 153

Query: 118 REYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
               E+I ++ R LDL   R++ ++  V R++II+ +R  + +++F+E  TP+L   +  
Sbjct: 154 LTDIETI-YRKRHLDLISNRESFNR-FVTRSKIISEIRRYLDSKDFLEVETPVLHNEAGG 211

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF 
Sbjct: 212 AAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFT 270

Query: 236 QLDMEMSFVEQDDILNTMENVLR 258
            +++  ++ +  DI+N  E +++
Sbjct: 271 SIEVYEAYADFQDIMNLTEGIIQ 293



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+ MLL    ++R+V LFP
Sbjct: 458 ALEYGMPPTGGLGIGIDRLCMLLTNTTSIRDVLLFP 493


>gi|218128656|ref|ZP_03457460.1| hypothetical protein BACEGG_00227 [Bacteroides eggerthii DSM 20697]
 gi|217989111|gb|EEC55426.1| hypothetical protein BACEGG_00227 [Bacteroides eggerthii DSM 20697]
          Length = 574

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 16/276 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV    D  C +  K + +     +  L    
Sbjct: 55  VSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPDEDKEMYNTVFKRLLDLGDFI 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             E        G+I + AQK+ +L+ + + PLP+        +   + PE +R++ R++D
Sbjct: 115 GIEGFVFRTQMGEISIHAQKLTVLAKSIK-PLPIVKYKDGVAYDSFDDPE-LRYRQRYVD 172

Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQG 189
           L   D + +   KR  II +MR  +    + E  TPIL  S P G  AR F         
Sbjct: 173 LIVNDGVKETFQKRATIIRTMRAALDEAGYTEVETPIL-QSIPGGASARPFTTHHNSLDM 231

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ + + + + +
Sbjct: 232 DLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-EFTCVELYVQYKDYNWM 289

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +   E +L  +    + G   + +   I +    RR
Sbjct: 290 MGFTEKLLERICIAVNGGTETTIDGKTISFKAPYRR 325



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A Q GMPP  GI  GIDR+ ML+ G   ++EV  FP
Sbjct: 460 KALQYGMPPTSGIGIGIDRLTMLMTGQPFIQEVLFFP 496


>gi|147676598|ref|YP_001210813.1| lysyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|259511529|sp|A5D5Q4|SYK_PELTS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|146272695|dbj|BAF58444.1| lysyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 506

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 19/246 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  I+D  G  Q+    +      +E+   +    ++ + G V
Sbjct: 69  VVIAGRIMSRRGMGKATFAHIQDGTGQIQIYVRLNDVGPESYELFGRLDIGDIIGVQGSV 128

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
                         G+I ++A+  +ILS +   LP    G R+    +R++ R++DL  +
Sbjct: 129 FKTR---------MGEITVAAESFKILSKSLRPLPEKWHGLRDV--ELRYRQRYVDLIVN 177

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
              K + + R++II + R  +  + F+E  TP++        AR F+          Y L
Sbjct: 178 PEVKEVFETRSKIIRACRNFLDGKGFLEVETPMMQVIPGGAAARPFITHHNALDMDLY-L 236

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF++ ++I   FR+E   +   P EF  L++  ++ +  D++N  E
Sbjct: 237 RIAPELYLKRLLVGGFEKVYEINRNFRNEGISTKHNP-EFTMLELYQAYADYTDMMNLTE 295

Query: 255 NVLRGV 260
            ++  V
Sbjct: 296 ELISAV 301



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 29/39 (74%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP+ +
Sbjct: 465 ALEYGMPPAGGLGIGIDRLVMLLTNSASIRDVILFPLMK 503


>gi|118594577|ref|ZP_01551924.1| lysyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118440355|gb|EAV46982.1| lysyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 504

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 123/290 (42%), Gaps = 29/290 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G    ++G +   R  G   F  I+D  G  Q+    D    E    + S +     G +
Sbjct: 62  GVIASIAGRMMLKRVMGKASFATIQDKQGKIQLYVARDLINSETNPELYSHFKKWDLGDI 121

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL--- 133
           +         N      EL+ +  EI+ + + + PLP        +  +++ R++DL   
Sbjct: 122 LGAKGRVFKTNTN----ELTIEVTEIILLTKSIRPLPEKFHGLSDQETKYRQRYVDLIVN 177

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQG 189
              RDT     +KR++I++ +R  M    F+E  TP+L    P GA  R F         
Sbjct: 178 EDTRDTF----LKRSKIMSGIRTFMQEHEFLEVETPML-HPIPGGATARPFKTHHNALDM 232

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++   ++ E + +
Sbjct: 233 EMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEG-LSVRHNPEFTMMEFYAAYTEYNWL 290

Query: 250 LNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
           +   E+ +R V E       V+          +F R+   +AI +Y +DK
Sbjct: 291 MEFTESCIRYVAELVVGSTKVNYQGKEIDFGKSFDRLTMVEAILKY-SDK 339



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+G    + +E     F     +KE  +           RA + G+PP 
Sbjct: 413 RFELFIAGREIANGFSELNDAEDQAVRFKAQVEAKESGDEEAMYYDADFIRALEYGLPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VML+  + ++R+V LFP
Sbjct: 473 GGCGIGIDRLVMLVTDSPSIRDVLLFP 499


>gi|67623847|ref|XP_668206.1| Kars protein [Cryptosporidium hominis TU502]
 gi|54659397|gb|EAL37975.1| Kars protein [Cryptosporidium hominis]
          Length = 532

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 23/261 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKS-V 65
           G  D  + + LSG V  +R     +IF DI       Q++AN       +  F ++ S +
Sbjct: 62  GYIDKDTTLSLSGRVTSIRSSSSKLIFYDIFCEEQKVQIIANIMEHDISTGEFSVSHSEI 121

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESI 124
           R   V+   G                G++ L ++ + +LS     LP  + G ++  + +
Sbjct: 122 RRGDVVGFTGFPGKSK---------RGELSLFSKSVVLLSPCYHMLPTAISGLKD--QEV 170

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182
           R++ R+LDL  +   + + K R+R I  +R       F+E  TP+L        AR F+ 
Sbjct: 171 RYRQRYLDLMLNEESRKVFKLRSRAIKYIRNYFDRLGFLEVETPMLNMIYGGAAARPFIT 230

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                +   Y +  AP+ Y + L+  G D+ ++I   FR+E       P EF  ++  M+
Sbjct: 231 YHNELETQLY-MRIAPELYLKQLIVGGLDKVYEIGKNFRNEGIDLTHNP-EFTAMEFYMA 288

Query: 243 FVEQDDILNTMENVLRGVFEE 263
           + +  D+++  E ++ G+  E
Sbjct: 289 YADYYDLMDLTEELISGLVLE 309



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 26/40 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG   GIDR++M L    N++EV LFP  +N
Sbjct: 479 ALEHGLPPTGGWGLGIDRLIMFLADKNNIKEVILFPAMRN 518


>gi|262384430|ref|ZP_06077565.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262294133|gb|EEY82066.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 576

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 132/286 (46%), Gaps = 29/286 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK---SVRSEWVLCIDGLV 77
           VR++G +   R  G   F++++D  G  QV  + D  C +  K   +V  + +L I   V
Sbjct: 55  VRIAGRIMSRRIMGKASFMELQDSEGRIQVYISRDDICPDENKDTYNVVFKKLLDIGDFV 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYR 129
                +        G+I + AQ++ +LS +   PLPV   ++         PE +R++ R
Sbjct: 115 ---GIKGFVFRTQMGEISVHAQELTVLSKSLR-PLPVVKYKDGVAYDGFNDPE-LRYRQR 169

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL  +   K+I +KR  II +MR  +    + E  TPIL + +    AR F+      
Sbjct: 170 YVDLVVNEGVKDIFMKRAAIIKTMRTALDEAGYTEVETPILQSIAGGASARPFITHHNSL 229

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + +
Sbjct: 230 DIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMELYVQYKDYN 287

Query: 248 DILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
            +++  E +L        G  E   +G T+S    F R+   +AI+
Sbjct: 288 WMMSFTEKLLERICIAVNGTSESTIDGKTISFKAPFRRLPILEAIK 333



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP
Sbjct: 460 RALQFGMPPTSGIGIGIDRLVMLMTGQTTIQEVLLFP 496


>gi|227502073|ref|ZP_03932122.1| lysine tRNA ligase [Corynebacterium accolens ATCC 49725]
 gi|227077228|gb|EEI15191.1| lysine tRNA ligase [Corynebacterium accolens ATCC 49725]
          Length = 525

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 16/247 (6%)

Query: 30  VRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMSRSAETINAN 88
           +R  G + F  ++D  G TQ+ A    A  ++ K     W   +D G  +S S   + + 
Sbjct: 88  MRNTGKLCFATLQDGDG-TQMQAMLSQA--KVGKERLDAWKSDVDLGDFISVSGHVVASR 144

Query: 89  IITGQIELSAQKIEILSVAEEL-PLPV-FGEREYPESIRFKYRFLDLR-RDTLHKNIVKR 145
               + ELS    E    A+ L PLPV F +    E  R + R+ DL  R+   KN + R
Sbjct: 145 ----RGELSIMAEEWTMAAKSLRPLPVSFAD--MAEDTRVRQRYNDLIIREEARKNAMVR 198

Query: 146 TRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
            +++ ++R  + +++F+E  TP+L A      AR F+  S       Y L  AP+ Y + 
Sbjct: 199 VKVMRALRNYLESQDFVEIETPMLQALHGGAAARPFITHSNALDIDLY-LRIAPELYLKR 257

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
            +  G DR F+I   FR+E       P EF  L+   ++ + +D        ++ V  E 
Sbjct: 258 AVVGGIDRVFEINRNFRNEGVDRSHSP-EFAMLETYAAWGDYNDCARMTRESIQSVAREV 316

Query: 265 SNGNTVS 271
               TV+
Sbjct: 317 FGSTTVT 323



 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 21/96 (21%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVML----------QAFSNVGISKE--VVENRFGGLYRA 528
           ++DL   GFE+A+G      SE++           QA    G  +E  V++  F     A
Sbjct: 433 KWDLYVRGFELATG-----YSELVDPVVQRARFEDQARLAAGGDEEAMVLDEDF---LAA 484

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            + GMPP  G   G+DR++M L G   +RE  LFP+
Sbjct: 485 MEQGMPPTAGTGMGMDRLLMALTGL-GIRETVLFPL 519


>gi|328712350|ref|XP_003244784.1| PREDICTED: lysyl-tRNA synthetase-like isoform 3 [Acyrthosiphon
           pisum]
          Length = 610

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 118/243 (48%), Gaps = 14/243 (5%)

Query: 23  LSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           ++G VH +R  G  +IF D+R      QV+AN  +  +   +S  S+      G ++  +
Sbjct: 143 VAGRVHAIRESGPKLIFYDLRGEGVKIQVMAN--AKQYTTEESFLSDTSKIRRGDIIGVT 200

Query: 82  AETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLH 139
                     G++ +  Q I++L+     LP   +G ++  +  R++ R+LDL   + + 
Sbjct: 201 GSP--GKTKKGELSIFPQNIKLLTPCLHMLPHMHYGLKD--KETRYRQRYLDLIINEHVR 256

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYALPQA 197
              + R ++I+ +R  +    F+E  TP++   +    A+ F+   + +N   F  +  A
Sbjct: 257 NKFIVRAKVISYVRRFLDNLGFLEIETPMMNMIAGGATAKPFITHHNDLNMDLFMRV--A 314

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++   E++L
Sbjct: 315 PELYHKMLVVGGIDRVYEIGRQFRNEAIDLTHNP-EFTTCEFYMAYADYNDLMQITEDLL 373

Query: 258 RGV 260
            G+
Sbjct: 374 SGL 376



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP  G   GIDR+ M L  + N++EV  FP
Sbjct: 553 SLEYGLPPTAGWGLGIDRLTMFLTDSNNIKEVLFFP 588


>gi|326526343|dbj|BAJ97188.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 550

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H  E++ +  +  GI K    N       +F  G PPHGG   
Sbjct: 465 FDVFLRGEEIISGAQRIHEPELLAKRVAEHGIDK----NSIKSYLESFSYGTPPHGGFGI 520

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+V L  G  ++R  SLFP
Sbjct: 521 GLERVVKLFCGLDDIRMASLFP 542



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 21/227 (9%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           + FL++R      Q V    +     A S+  E V+ ++G V           +   ++E
Sbjct: 122 VAFLELRQGMSTVQCVLAGSAQMALFALSLPKESVVFVEGAVALLDKPLRYTTV--QEVE 179

Query: 96  LSAQKIEILSVAE-ELPLPV---------FGERE--------YPESIRFKYRFLDLRRDT 137
           +  +K+  +S A+ +LP+ V         F   E          +  R  +  ++LR   
Sbjct: 180 IQVRKLYCVSRAKPKLPISVEDAGRSSEEFAMAEANGVQLPRVGQDTRLNHPAINLRTPA 239

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           +      + +I +  R  + + +FI   TP L + S EG          N G    L Q+
Sbjct: 240 VQAIFRIKHQIEHKFREYLSSRDFIGIHTPKLISGSSEGGAAVFKLEYKN-GKTACLAQS 298

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           PQ +KQ+ +  G  R F++   FR ED  + R   EF  +D EM  +
Sbjct: 299 PQLHKQMAICGGLRRVFEVGHIFRAEDSNTHRHLCEFVGMDAEMEIM 345


>gi|217077587|ref|YP_002335305.1| lysyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|226736755|sp|B7ID87|SYK_THEAB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|217037442|gb|ACJ75964.1| lysyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 502

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/293 (21%), Positives = 127/293 (43%), Gaps = 21/293 (7%)

Query: 5   RTHSCGDL---------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           +THS  D+         G     + V  +G +  +R HG   F  I+D +G  Q     D
Sbjct: 30  KTHSSQDIKAQFENLNPGEVKEDASVSTAGRIMSLRHHGKSAFFHIKDFFGRIQAYIRQD 89

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               ++ +  +    +   G ++        +   TG++ +  ++IE+L+     P+P  
Sbjct: 90  IVGKDVYEFFKEHIAI---GDIVGVKGSVFKSK--TGEVTILVKEIELLNKPLR-PMPEK 143

Query: 116 GEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-AS 172
                 + + ++ R++D+    +TL++  + R  II  +R  + ++ FIE  TPIL   +
Sbjct: 144 WHGIKDKEVLYRQRYVDMIANDETLNRFRI-RFEIIKLIREFLNSKGFIEVETPILEYVT 202

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+    V     Y +  A + Y +  +  GF++ +++   FR+E       P 
Sbjct: 203 GGASARPFITHLNVFDIDMY-MRIATELYLKRFIVGGFEKVYELGKNFRNEGLSYKHHP- 260

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           EF  +++  ++ + +D++N  E +   + E+      V    + I +    RR
Sbjct: 261 EFTSIEIYQAYADYEDMMNLTEELFVFIVEKLFGTTKVKYQDIEIDFSRPWRR 313



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP GG+  GIDR+VMLL  +  +R+V  FP+
Sbjct: 446 RALEYGMPPTGGLGIGIDRLVMLLTNSPTIRDVIAFPL 483


>gi|321313752|ref|YP_004206039.1| lysyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|291482454|dbj|BAI83529.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
 gi|320020026|gb|ADV95012.1| lysyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 499

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 126/282 (44%), Gaps = 37/282 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  ++D  G  Q+    DS     +EI KS     ++ + G V
Sbjct: 65  VTIAGRMMTKRGKGKAGFAHLQDLEGQIQIYVRKDSVGDDQYEIFKSSDLGDLIGVTGKV 124

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--R 134
              +          G++ + A   E+L+ A   LP    G ++  +  R++ R+LDL   
Sbjct: 125 FKTNV---------GELSVKATSFELLTKALRPLPDKYHGLKDVEQ--RYRQRYLDLIVN 173

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFY 192
            D+ H   + R++II +MR  +    ++E  TP +  S P GA  R F+          Y
Sbjct: 174 PDSKH-TFITRSKIIQAMRRYLDDHGYLEVETPTM-HSIPGGASARPFITHHNALDIPLY 231

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++ 
Sbjct: 232 -MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDIMSL 289

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            EN++  + +E     T+              +YG ++ DL+
Sbjct: 290 TENLVAHIAQEVLGTTTI--------------QYGEEQIDLK 317



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 459 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFP 494


>gi|256842571|ref|ZP_05548073.1| lysyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256735927|gb|EEU49259.1| lysyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 576

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 132/286 (46%), Gaps = 29/286 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK---SVRSEWVLCIDGLV 77
           VR++G +   R  G   F++++D  G  QV  + D  C +  K   +V  + +L I   V
Sbjct: 55  VRIAGRIMSRRIMGKASFMELQDSEGRIQVYISRDDICPDENKDTYNVVFKKLLDIGDFV 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYR 129
                +        G+I + AQ++ +LS +   PLPV   ++         PE +R++ R
Sbjct: 115 ---GIKGFVFRTQMGEISVHAQELTVLSKSLR-PLPVVKYKDGVAYDGFNDPE-LRYRQR 169

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL  +   K+I +KR  II +MR  +    + E  TPIL + +    AR F+      
Sbjct: 170 YVDLVVNEGVKDIFMKRAAIIKTMRTALDEAGYTEVETPILQSIAGGASARPFITHHNSL 229

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + +
Sbjct: 230 DIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMELYVQYKDYN 287

Query: 248 DILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
            +++  E +L        G  E   +G T+S    F R+   +AI+
Sbjct: 288 WMMSFTEKLLERICIAVNGTSESTIDGKTISFKAPFRRLPILEAIK 333



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP
Sbjct: 460 RALQFGMPPTSGIGIGIDRLVMLMTGQTTIQEVLLFP 496


>gi|256852019|ref|ZP_05557406.1| lysyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661412|ref|ZP_05862325.1| lysyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|256615431|gb|EEU20621.1| lysyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547867|gb|EEX23844.1| lysyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
          Length = 514

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 21/272 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F DI D  G  Q+    D      ++I K       L I+G V
Sbjct: 67  TKIAGRMMAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYQIFKKSDLGDFLGIEGEV 126

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDLRRD 136
           M            TG++ + A  +  LS A   PLP  +   +  E I ++ R+LDL  +
Sbjct: 127 MKTD---------TGELTVRAHHVTFLSKALR-PLPDKYHGLQNVEQI-YRQRYLDLMTN 175

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYA 193
              +   V RT+II ++R  +   +F+E  TP+L  + P G  AR F+          Y 
Sbjct: 176 HDSYMRFVHRTKIIQAIRDYLNNRDFLEVETPVL-HNIPGGAEARPFITHHNALDIDLY- 233

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  A +   + L+  G +R ++I   FR+E   +   P EF +L+   ++ +  D+++  
Sbjct: 234 LRIALELPLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTELETYCAYWDFHDVMDEA 292

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           E +++   +  ++   V+     I      RR
Sbjct: 293 EGIIKAAAKVVTDDGKVNYQGTEIDLGKPFRR 324



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 460 RALEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 496


>gi|329943177|ref|ZP_08291951.1| lysyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287759|ref|YP_004422660.1| lysyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313848331|emb|CBY17334.1| putative lysyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325507194|gb|ADZ18832.1| lysyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328814724|gb|EGF84714.1| lysyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328915015|gb|AEB55848.1| lysyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 526

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 17/188 (9%)

Query: 122 ESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           + IR++ R+LDL   D + +  +KR+RII  +R  M A+ FIE  TPIL           
Sbjct: 171 KEIRYRKRWLDLISSDEVRQTFLKRSRIIKLIRHYMDAQGFIEVETPILQNVYGGAEATP 230

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            + +     S   L  +P+   + ++  G  R ++I   FR+E       P EF  ++  
Sbjct: 231 FITTLNALHSEVFLRISPEISLKKVLVGGTPRIYEIGKVFRNEGIDRTHNP-EFTIMEAY 289

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT-----------VSNNF----LRICYDDAIRR 285
            + ++   ++  +EN++  +  E +NG+T           VS +F    +R+   D+I+ 
Sbjct: 290 ATNIDYHSVMTYVENLVEHLVCELNNGSTVLTYSHLKQGPVSIDFKAPWIRMTMKDSIKT 349

Query: 286 YGTDKPDL 293
           YG    DL
Sbjct: 350 YGGVDVDL 357



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 23/32 (71%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP GG   GIDR+VM+L  A ++R+V  FP
Sbjct: 485 GLPPTGGFGIGIDRLVMILTDAASIRDVLYFP 516


>gi|77359476|ref|YP_339051.1| lysyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|76874387|emb|CAI85608.1| lysyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 511

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 79/347 (22%), Positives = 147/347 (42%), Gaps = 44/347 (12%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           GD    ++    ++     R+    G  F+ I+D  G  Q  A+ D     + K ++ ++
Sbjct: 49  GDKSKEELVELQQVVSIAGRILAKRGPFFV-IQDMKGRVQSYASKD-----VQKDLKEKY 102

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
                G ++      +N    +G+ +L  +  E   + + L PLP        +  +++ 
Sbjct: 103 GQLDTGDIIGVKG-ALNK---SGKGDLYVEMTEYQLLTKSLRPLPEKFHGLSDQETKYRQ 158

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSR 185
           R++DL  +   +   + R++++  +R  +   +F+E  TP+L    P GA  R F+    
Sbjct: 159 RYVDLITNEATRETFRIRSQVVEGIRRFLADRDFMEVETPMLQVI-PGGASARPFVTHHN 217

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ Y + L+  GFDR F+I   FR+E   +   P EF  ++   ++ +
Sbjct: 218 ALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSTRHNP-EFTMIEFYQAYAD 275

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN-------------------FLRICYDDAIRRY 286
             D++N  E++LR V E       V N                    F R+   DAI +Y
Sbjct: 276 YIDLMNITEDMLRTVAENVLGSAVVVNTTKDENGEVIDSVEYDFGQPFTRLSMSDAILKY 335

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAK 332
               P+  +  + ++   HF   + + ++K + V  P   VW  P K
Sbjct: 336 N---PEF-DAAVFNDPENHF--EQLKAYAKQVHVKIPENCVWG-PGK 375



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VML   +  +++V LFP
Sbjct: 468 RALEYGLPPTAGEGIGIDRLVMLFTDSPTIKDVILFP 504


>gi|134298053|ref|YP_001111549.1| lysyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|134050753|gb|ABO48724.1| lysyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 510

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 121/274 (44%), Gaps = 19/274 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAKSVR---SEWVLCI 73
           G  V ++G +   R  G   F +I+D  G  QV A   D    E A+  +    + + C 
Sbjct: 71  GQTVTIAGRITAKRVMGKASFANIQDSRGNIQVYARLNDLGAEEYARLEKLDIGDIIGCY 130

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             +  +R           G+I +     ++LS +   PLP          +R++ R++DL
Sbjct: 131 GKVFRTRK----------GEITVHIDSYKLLSKSLR-PLPEKWHGLKDVDLRYRQRYVDL 179

Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +  + +  + R+R++  +R  +    F+E  TP++   +    AR F+        + 
Sbjct: 180 IVNPEVKQTFITRSRVVRGIRNYLDQRGFLEVETPMMHPIAGGASARPFITHHNTLDMNL 239

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y +  AP+ Y + L+  GFD+ ++I   FR+E   +   P EF  +++  ++ + +D+++
Sbjct: 240 Y-MRIAPELYLKRLLVGGFDKVYEINRNFRNEGISTRHNP-EFTTIELYQAYADYNDMMD 297

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             E+++  V ++      V    + I      RR
Sbjct: 298 LTEDLISQVAQDVLGTTMVEYEGVEISLAKPWRR 331



 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 29/38 (76%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A + GMPP GG+  GIDR+VMLL  + ++R+V LFP+
Sbjct: 467 QALEYGMPPAGGLGIGIDRLVMLLTNSSSIRDVILFPL 504


>gi|297172546|gb|ADI23516.1| lysyl-tRNA synthetase (class II) [uncultured Gemmatimonadales
           bacterium HF0770_41L09]
          Length = 508

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 20/189 (10%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREY---------------PESIRFKYRFLDLRR 135
           TG+I + A+   +L+ +   PLP FG+ E                PE+ R++ R+ DL  
Sbjct: 125 TGEITIRAESYTLLTKSLR-PLP-FGKTEENTETGGRIEHSGFADPET-RYRQRYADLAV 181

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
               +N+ + RT+II S+R  + +ENF+E  TP+L       +    V      G    L
Sbjct: 182 HPDLRNVFETRTKIIRSLRSFLDSENFLEVETPVLQPLYGGASAKPFVTHHEALGLTMYL 241

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + Y + L+  G DR ++I+  FR+E       P EF  L+   +F + +D +  +E
Sbjct: 242 RIADELYLKRLLVGGLDRVYEISKDFRNEGLSRVHNP-EFTMLEWYQAFTDYNDQMILVE 300

Query: 255 NVLRGVFEE 263
            ++  V +E
Sbjct: 301 RIVGHVLDE 309



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP GG+  G+DR VM++    ++R+V LFP+
Sbjct: 466 RALEYGMPPTGGVGLGVDRFVMMITDQPSIRDVILFPI 503


>gi|298377245|ref|ZP_06987198.1| lysine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298265659|gb|EFI07319.1| lysine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 576

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 132/286 (46%), Gaps = 29/286 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK---SVRSEWVLCIDGLV 77
           VR++G +   R  G   F++++D  G  QV  + D  C +  K   +V  + +L I   V
Sbjct: 55  VRIAGRIMSRRIMGKASFMELQDSEGRIQVYISRDDICPDENKDTYNVVFKKLLDIGDFV 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYR 129
                +        G+I + AQ++ +LS +   PLPV   ++         PE +R++ R
Sbjct: 115 ---GIKGFVFRTQMGEISVHAQELTVLSKSLR-PLPVVKYKDGVAYDGFNDPE-LRYRQR 169

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL  +   K+I +KR  II +MR  +    + E  TPIL + +    AR F+      
Sbjct: 170 YVDLVVNEGVKDIFMKRAAIIKTMRTALDEAGYTEVETPILQSIAGGASARPFITHHNSL 229

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + +
Sbjct: 230 DIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMELYVQYKDYN 287

Query: 248 DILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
            +++  E +L        G  E   +G T+S    F R+   +AI+
Sbjct: 288 WMMSFTEKLLERICIAVNGTSESTIDGKTISFKAPFRRLPILEAIK 333



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP
Sbjct: 460 RALQFGMPPTSGIGIGIDRLVMLMTGQTTIQEVLLFP 496


>gi|270295934|ref|ZP_06202134.1| lysyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270273338|gb|EFA19200.1| lysyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 576

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 116/251 (46%), Gaps = 16/251 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV    D  C +  K + +     +  L    
Sbjct: 55  VSVAGRIMSRRIMGKASFIELQDSKGRIQVYITRDDICPDEDKEMYNTVFKRLLDLGDFI 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             E        G+I + A+K+ +L+ + + PLP+        +   E PE +R++ R++D
Sbjct: 115 GIEGFVFRTQMGEISIHAKKLTVLAKSIK-PLPIVKYKDGVAYDSFEDPE-LRYRQRYVD 172

Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQG 189
           L   D + +  +KR  +I +MR  +    + E  TPIL  S P G  AR F+        
Sbjct: 173 LIVNDGVKEKFLKRATVIKTMRAVLDEAGYTEVETPIL-QSIPGGASARPFITHHNSLDI 231

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ + + + + +
Sbjct: 232 DLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-EFTCMELYVQYKDYNWM 289

Query: 250 LNTMENVLRGV 260
           ++  E +L  +
Sbjct: 290 MSFTEKLLERI 300



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A Q GMPP  GI  GIDR+ ML+ G   ++EV  FP
Sbjct: 460 KALQYGMPPTSGIGIGIDRLTMLMTGESFIQEVLFFP 496


>gi|253583599|ref|ZP_04860797.1| lysine-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251834171|gb|EES62734.1| lysine-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 493

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 120/280 (42%), Gaps = 33/280 (11%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLVM 78
           + +G +   R  G  +F  I D  G  Q+    D      FE+   +    ++ ++G + 
Sbjct: 57  KTAGRIMAYRGKGKTLFAHIEDRTGRIQLYLRKDELGDEVFEMVNKIGVGDIVGVEGELF 116

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL----- 133
                       TG++ L    I++LS     PLP           R++ R++DL     
Sbjct: 117 VTH---------TGELTLRVTSIQLLS-KNIRPLPEKFHGLTDVETRYRKRYVDLIMNKD 166

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            RDT     +KRT+II  +R  +  + F+E  TP++        A+ F+          Y
Sbjct: 167 VRDTF----IKRTQIIKGIREILDNKGFLEVETPLMHPILGGAAAKPFITHHNALNVDLY 222

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y + L+  G ++ +++   FR+E   +   P EF  +++  ++ + +D+++ 
Sbjct: 223 -MRIAPELYLKRLIVGGLEKVYELGRNFRNEGMSTRHNP-EFTMIELYQAYADFNDMMDL 280

Query: 253 MENVLRGVFE--------EFSNGNTVSNNFLRICYDDAIR 284
            E ++  + +        E++    V  NF RI   D ++
Sbjct: 281 AEEIITTLAKKVLGTTTVEYNGKTLVLENFKRIHMVDFVK 320



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR++MLL  + ++R+V LFP
Sbjct: 452 ALEYGLPPTGGMGIGIDRLIMLLTQSDSIRDVLLFP 487


>gi|260771796|ref|ZP_05880714.1| lysyl-tRNA synthetase (class II) [Vibrio metschnikovii CIP 69.14]
 gi|260613088|gb|EEX38289.1| lysyl-tRNA synthetase (class II) [Vibrio metschnikovii CIP 69.14]
          Length = 510

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 90/172 (52%), Gaps = 7/172 (4%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIIN 150
           G + ++ ++ E+L+ A   PLP        + +R++ R++DL   +   +  V R+++++
Sbjct: 133 GDLYVNIEQYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVIRSKVMS 191

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  M ++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 192 AIRNFMTSKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  V
Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYADYKDLMDFTEELLSTV 300



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 469 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504


>gi|298527829|ref|ZP_07015233.1| asparaginyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511481|gb|EFI35383.1| asparaginyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 459

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 102/259 (39%), Gaps = 30/259 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV   R   G++FL++ D    T  Q+V +P  A  +      +   + + G   
Sbjct: 19  IMLKGWVRTKRESKGVVFLELNDGSCRTNLQIVVDPGVAGIDSLDGTGTGAAIKVTG--- 75

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                 + A+   GQ  E+ A+++E++  A++   P+  +R   E +R       LR  T
Sbjct: 76  -----NLQASPGKGQKWEVQAEQVELIGSADQESYPLQKKRHSDEFLR---GIAHLRPRT 127

Query: 138 LHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
                + R R   S           F    TPI+T S  EGA D  V + ++    +  P
Sbjct: 128 NKYGAMNRIRSELSFAVHQYFRERGFYYIHTPIITGSDCEGAGDMFVVTALDPDKAWKSP 187

Query: 196 --------------QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                             Q     MA      +   P FR E+  + +   EF+ ++ E+
Sbjct: 188 AEFGRDFFGKKAHLTVSGQLPAESMACALGDVYTFGPTFRAENSNTSKHAAEFWMVEPEV 247

Query: 242 SFVEQDDILNTMENVLRGV 260
           +F +  DI+   +  ++ +
Sbjct: 248 AFADLQDIMEMAQGFVQAL 266



 Score = 38.5 bits (88), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 6/83 (7%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIAAGIDRIVM 548
           EI  G  R    EV+ +     G+S +         YR  +  G  PH G   G +R++M
Sbjct: 382 EIIGGSQREERLEVLDRRIQEAGLSFDEY-----WWYRDLRRFGSVPHAGFGLGFERLLM 436

Query: 549 LLLGAKNVREVSLFPMSQNFCDL 571
            + G  N+R+V  FP + N  + 
Sbjct: 437 FITGVSNIRDVIPFPRTPNMLEF 459


>gi|255562160|ref|XP_002522088.1| hypothetical protein RCOM_1382360 [Ricinus communis]
 gi|223538687|gb|EEF40288.1| hypothetical protein RCOM_1382360 [Ricinus communis]
          Length = 191

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 11/94 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-----------YGITQVVAN 53
           R+  CG+L V+D G  V L GWV   R HGG+ FL++RDH            G+   + +
Sbjct: 36  RSGLCGELSVNDAGKRVLLCGWVALYRVHGGLTFLNLRDHTVRRIETQSHLMGVVTTLPD 95

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINA 87
                  I   +R ++V+ ++G+V SR  E++ A
Sbjct: 96  EFPDARSIINDLRLQYVVAVEGVVQSRPFESVAA 129


>gi|66820282|ref|XP_643772.1| asparagine-tRNA ligase [Dictyostelium discoideum AX4]
 gi|74857454|sp|Q554D9|SYNC_DICDI RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|60471958|gb|EAL69912.1| asparagine-tRNA ligase [Dictyostelium discoideum AX4]
          Length = 653

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 115/276 (41%), Gaps = 22/276 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V +  W H VR    I+FL++RD  G  Q V + D     I   +  E  + I G ++  
Sbjct: 232 VEVHAWAHHVRNQKKIVFLELRDGTGFLQCVLSGDLVHPSIIDKLLREATVKIVGTLVIP 291

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
            A+        G +EL A   E+L  +      V  +    + + F  R + + R T   
Sbjct: 292 PAD----KKCPGGVELQADYWELLGPSNADLEGVINQESNVDHL-FDQRHI-MMRGTRAS 345

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           +I+K R+  + + R      +++E + P L  +  EG  +        + ++  L Q+ Q
Sbjct: 346 SIMKIRSLCLFAFRQHFFENHYMEVTPPTLVNTYCEGGSELFTVDYFGKPAY--LTQSSQ 403

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + ++    D  F I   +R E  R+ R   EF  L+ E  F+  +++ + +E ++  
Sbjct: 404 LYLETMLPVLGDN-FTITQSYRAEKARTRRHLTEFLHLEAECPFITYEELQDRIEFLVVD 462

Query: 260 VFEEF------------SNGNTVSNNFLRICYDDAI 283
           V E+              +       F+R+ Y DAI
Sbjct: 463 VCEKLFKMDPELILSVNPDFKVPKRPFMRMNYSDAI 498


>gi|302341786|ref|YP_003806315.1| asparaginyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638399|gb|ADK83721.1| asparaginyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 454

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 116/312 (37%), Gaps = 42/312 (13%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIA 62
           RT     L  ++    V + GW    R   G++FL+I D    G  QV+   DSA +   
Sbjct: 3   RTRVRRALAATEALGLVLIRGWARTRRESKGLVFLEINDGSCLGNLQVLVAEDSAAWGGL 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEELPLPVFGEREYP 121
             V +   L + G   +  A+        GQ  EL A+ + +L VA+    P+  +R   
Sbjct: 63  GEVSTGAALEVVGRHQASPAK--------GQAWELHAEGLRVLGVADPESYPLQKKRHGD 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF- 180
           E +R     L  R +        R R   ++        F    TPI+T S  EGA +  
Sbjct: 115 EFLR-TIAHLRPRTNKYGAMFRIRARAALAVHEFFGQRGFCWVHTPIITGSDCEGAGEMF 173

Query: 181 ----LVPSRVNQGSFYALPQAPQQYKQLLMASGF----DRYFQIAPCFRDEDPRSDRLPG 232
               L P  V+  + +   QA       L A  F       +   P FR E+  + R   
Sbjct: 174 RVTTLPPGEVDLAADFFGRQAGLTVSGQLEAEPFALALGDVYTFGPTFRAENSNTPRHAA 233

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLR--------------GVFEEFSN-------GNTVS 271
           EF+ ++ EM+F +  D +   E+  +               +FE F            V 
Sbjct: 234 EFWMIEPEMAFADLADDMALAEDFTKDLTRRVLADCGEDLALFERFVQPGLLAGLAAMVE 293

Query: 272 NNFLRICYDDAI 283
             F R+ Y  AI
Sbjct: 294 GPFERVSYGQAI 305


>gi|332359479|gb|EGJ37299.1| lysine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 496

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  I+D  G  Q+    D+     +EI K       L I+G +M 
Sbjct: 65  IAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGEENYEIFKKADLGDFLGIEGEIMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A  +  LS A   PLP  F      E+I ++ R+LDL   R+
Sbjct: 125 TD---------MGELSIKATHLTHLSKALR-PLPEKFHGLTDVETI-YRKRYLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     Q     L  
Sbjct: 174 SFER-FVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQDIMDLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|332886410|gb|EGK06654.1| lysyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 575

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 21/218 (9%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGL 76
           +V L+G +   R  G   F++++D  G  QV  + D  C +  K + +   + +L I   
Sbjct: 54  YVSLAGRIMGRRIMGKASFMELQDSEGRIQVYISRDDLCPDENKELYNTIFKKLLDIGDF 113

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKY 128
           V     +        G+I + A+++ +L  +   PLPV   ++         PE  R++ 
Sbjct: 114 V---GVKGFVFRTQMGEISVHAEELTVLGKSLR-PLPVVKVKDGVTYDGFTDPEQ-RYRQ 168

Query: 129 RFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSR 185
           R++DL   D +    +KRT++ NSMR  +    +IE  TP+L  S P G  AR F+    
Sbjct: 169 RYVDLVVNDNVKDVFIKRTKVFNSMREFLNGHGYIEVDTPVL-QSIPGGATARPFITHHN 227

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
                 Y L  A + Y + L+  GFD  ++ +  FR+E
Sbjct: 228 ALDIPLY-LRIANELYLKRLIVGGFDGVYEFSRNFRNE 264



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 5/63 (7%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           RA + GMPP  GI  G+DR+VM + G ++++EV  FP  +        +P   +V +  E
Sbjct: 460 RALEYGMPPTSGIGIGMDRLVMFMTGQESIQEVMFFPQMRP-----EKAPKKDAVSKYEE 514

Query: 587 LGL 589
           LG+
Sbjct: 515 LGI 517


>gi|312867292|ref|ZP_07727501.1| lysine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311096993|gb|EFQ55228.1| lysine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 438

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    D+     +EI K       L ++G +M 
Sbjct: 7   IAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDFLGVEGEIMR 66

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A  I  LS A   PLP  F      E+I ++ R+LDL   R+
Sbjct: 67  TD---------MGELSIKATHITHLSKALR-PLPEKFHGLSDVETI-YRKRYLDLISNRE 115

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     Q     L  
Sbjct: 116 SFER-FVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRI 174

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E +
Sbjct: 175 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFHDIMDLTEGI 233

Query: 257 LR 258
           ++
Sbjct: 234 IQ 235



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           LQ F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+V 
Sbjct: 373 LQRFEAQARAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTNVTTIRDVL 432

Query: 561 LFP 563
           LFP
Sbjct: 433 LFP 435


>gi|295401954|ref|ZP_06811916.1| lysyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109229|ref|YP_003987545.1| lysyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294975956|gb|EFG51572.1| lysyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311214330|gb|ADP72934.1| lysyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 494

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 130/307 (42%), Gaps = 38/307 (12%)

Query: 5   RTHSC-------GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH         GDL   ++      V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 34  RTHKAQELFDLYGDLSKEELEEKQIKVAVAGRIMTKRGKGKAGFAHIQDVTGQIQIYVRE 93

Query: 55  DSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EEL 110
           D+     +E+ K+     ++ + G V              G++ +     E L+ A   L
Sbjct: 94  DAVGPEQYELFKTSDLGDIIGVCGTVFKTKV---------GELSIKVSSYEFLTKALRPL 144

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL 169
           P    G ++  +  R++ R+LDL  +   KN  + R+RII SMR  + +  ++E  TP++
Sbjct: 145 PEKYHGLKDIEQ--RYRQRYLDLIMNPDSKNTFITRSRIIQSMRRYLDSHGYLEVETPMM 202

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y +  A + + + L+  G ++ ++I   FR+E   + 
Sbjct: 203 HNIAGGAAARPFITHHNALDMPLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTR 261

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICY 279
             P EF  L++  ++ +  DI+   EN++  + +E      +         +  + R+  
Sbjct: 262 HNP-EFTMLELYEAYADFRDIMTLTENLIAHIAQEVLGTTKIQYGEHKVDLTPEWKRLHM 320

Query: 280 DDAIRRY 286
            DAI+ Y
Sbjct: 321 VDAIKEY 327



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GG+  G+DR+VMLL  + ++R+V LFP  +N
Sbjct: 454 ALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMRN 493


>gi|300778809|ref|ZP_07088667.1| lysine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300504319|gb|EFK35459.1| lysine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 565

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 21/251 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-GLVM 78
           V+++G +   R  G   F +++D  G  QV  N D  C    K + +E +   +D G ++
Sbjct: 49  VKIAGRLMSRRIQGKASFAELQDSKGKIQVYFNRDEICPGEDKELYNEVYKHLLDIGDII 108

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---------PESIRFKYR 129
               E     +  G+  +  +   +L+ A   PLP     EY         PE +R++ R
Sbjct: 109 GIEGELFTTQV--GEKTVLVKNFTLLTKALR-PLPQAKTDEYGVVHDGFTDPE-LRYRQR 164

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRV 186
           ++DL  +   K I VKRT++ N+MR       + E  TPIL  S P G  A+ F+     
Sbjct: 165 YVDLTVNPQVKEIFVKRTKLFNAMRTFFNDAGYFEVETPIL-QSIPGGAAAKPFITHHNA 223

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ + 
Sbjct: 224 LDIPLY-LRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKDY 281

Query: 247 DDILNTMENVL 257
           + +++  E +L
Sbjct: 282 NWMMDFTEKLL 292



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L    +++EV  FP
Sbjct: 455 RALEYGMPPTSGLGIGMDRLIMFLTNNASIQEVLFFP 491


>gi|157872107|ref|XP_001684602.1| lysyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68127672|emb|CAJ05785.1| putative lysyl-tRNA synthetase [Leishmania major strain Friedlin]
          Length = 536

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 116/253 (45%), Gaps = 34/253 (13%)

Query: 34  GGIIFLDIRDHYGITQVVANPDSACFE-----IAKSVRSEWVLCIDGLVMSRSAETINAN 88
           GGI+F+ IR      QV+   + +  +      A ++ +  +L   G V  R+A+     
Sbjct: 2   GGILFITIRSGEAQLQVLRQVNESFTKADLRAFASTLHTGDILGATG-VPGRTAK----- 55

Query: 89  IITGQIELSAQKIEILSVAEELPLPVFGEREYPE----------SIRFKYRFLDLRRD-T 137
              G++ L A +  IL+     P     +   P+           I+++YRF+D+  + +
Sbjct: 56  ---GELSLYATEASILA-----PYVCTDQALCPDLKGFVPLADTGIKYRYRFVDMMSNPS 107

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
           + ++  KR  I  ++R  + A +F+E  TP+L + +S   A+ F+     N    + L  
Sbjct: 108 VVQHFRKRHAITRALRDFLDARSFVEVETPVLHSVASGANAKPFVTHHNANDADLF-LRV 166

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + +  +  G +R ++I   FR+ED      P EF   +   ++   +D++   E +
Sbjct: 167 APELHLKQCVVGGMERVYEIGRVFRNEDADRSHNP-EFTTCEFYAAYHTYEDLMTMTEEI 225

Query: 257 LRGVFEEFSNGNT 269
           LR +    +NG T
Sbjct: 226 LRHL-ALAANGTT 237



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A Q G+PP  G   GIDR+VMLL G+  +RE  LFP+
Sbjct: 402 KALQVGLPPTAGWGMGIDRVVMLLNGSSTIREDILFPL 439


>gi|332967664|gb|EGK06775.1| lysine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 504

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 127/305 (41%), Gaps = 40/305 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  I+D  G  Q+  N         K V  + +   +   M  
Sbjct: 69  VKIAGRMMLKRQMGKASFATIQDVSGQIQLYLN--------NKGVSQDILDAFNHWDMGD 120

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-----R 134
               +     T   EL+ +  EI  + + L PLP        +  +++ R++DL      
Sbjct: 121 IVGAVGTLFKTNHGELTVRVSEIRLLTKSLRPLPSKFHGLSDQETKYRQRYVDLIANPDS 180

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
           RDT     +KR++I+ S+R  M+ E ++E  TP++    P G  A+ F+          Y
Sbjct: 181 RDTF----IKRSQIVQSIRNFMVNEQYLEVETPMM-HPIPGGATAKPFVTHHNALDMPLY 235

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   +F + + ++  
Sbjct: 236 -LRIAPELYLKRLVVGGLERVFEINRNFRNEG-MSVRHNPEFTMMEFYEAFCDYERMMEM 293

Query: 253 MENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD--------LRN 295
            E V+R      +    ++ N         F R+    AI+++     D        L+ 
Sbjct: 294 TEGVIRAASHAVNGTAKITYNGKEVDLESPFERLTILQAIKKFNPQYTDEQLHDAEWLKK 353

Query: 296 PIIMH 300
            I+ H
Sbjct: 354 EIVKH 358



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY 526
           + +D  S    +++L   G E+A+G    +  E     F +    K+  ++    F   Y
Sbjct: 402 RASDTKSDLTERFELFVVGRELANGYSELNDPEDQAARFKSQVAQKDAGDDEAMHFDADY 461

Query: 527 -RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + G+PP GG   GIDR+VMLL  A+ +R+V LFP
Sbjct: 462 IRAMEFGLPPTGGCGIGIDRLVMLLTDAQTIRDVVLFP 499


>gi|160932786|ref|ZP_02080175.1| hypothetical protein CLOLEP_01627 [Clostridium leptum DSM 753]
 gi|156867860|gb|EDO61232.1| hypothetical protein CLOLEP_01627 [Clostridium leptum DSM 753]
          Length = 503

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 28/277 (10%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGLVM 78
           ++G +   R  G   F+DI D  G  QV    +    E+ + +  +W    +  + G V 
Sbjct: 69  VAGRIMSWRDMGKASFIDIHDRTGRIQVYLRINDLGEEVYRGL-DKWDIGDIASVKGFVF 127

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-T 137
                        G+I + A+++ +LS +       F      + +R++ R++DL  +  
Sbjct: 128 RTR---------RGEISIHAKEVRLLSKSLLPLPDKFHGLTNTD-LRYRQRYVDLIVNPE 177

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
           +    +KR++II S+R  +   +FIE  TPIL T      AR F+          Y L  
Sbjct: 178 VKDTFIKRSQIIKSIREDLDNLDFIEVETPILNTIPGGAAARPFITHHNTLDIDLY-LRI 236

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  G +R ++I   FR+E       P EF  +++  ++ + + ++   EN+
Sbjct: 237 APELYLKRLIVGGMERVYEIGRLFRNEGMDVKHNP-EFTTIELYQAYTDYNGMMELTENL 295

Query: 257 LRGV------FEEFSNGN---TVSNNFLRICYDDAIR 284
           +          EE S G    +++  F R+   DA++
Sbjct: 296 IHSAAIKVCGTEEISYGGQPVSLALPFKRVTMIDAVK 332



 Score = 43.9 bits (102), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GM P GG+  GIDR+ MLL  + ++R+V LFP
Sbjct: 462 ALEYGMAPTGGMGMGIDRLAMLLTDSASIRDVLLFP 497


>gi|325694881|gb|EGD36786.1| lysine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 496

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  I+D  G  Q+    D+     +EI K       L I+G +M 
Sbjct: 65  IAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGEENYEIFKKADLGDFLGIEGEIMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A  +  LS A   PLP  F      E+I ++ R+LDL   R+
Sbjct: 125 TD---------MGELSIKATHLTHLSKALR-PLPEKFHGLTDVETI-YRKRYLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     Q     L  
Sbjct: 174 SFER-FVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQDIMDLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|325851852|ref|ZP_08171017.1| asparagine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325484694|gb|EGC87607.1| asparagine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 463

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 112/274 (40%), Gaps = 32/274 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  +D G  + + GWV   R    + F+ + D   I   Q+V +P     E  
Sbjct: 3   RTKVVDALACTDFGKDINVKGWVRSHRSSKAVDFIALNDGSTIKNIQIVVDPSKMDAEEL 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVA-EELPLPVFGER-E 119
           KS+ +   + + G ++    +        GQ  E+  ++IEI  +   + P+   G+  E
Sbjct: 63  KSITTGACISVVGTLVESQGK--------GQTSEIQCKEIEIYGLCPSDYPMQKKGQSFE 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           Y      KY  + LR +T       R  +  ++        F    TP++T S  EGA +
Sbjct: 115 YMR----KYGHMRLRTNTFGAVFRIRHNMAIAIHRYFHEHGFYYFHTPLITGSDAEGAGN 170

Query: 180 FLVPSRVN------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDED 224
               + ++               F+          QL   L A+     +   P FR E+
Sbjct: 171 MFQVTTLDLDRIAKSGKVDYNADFFGKRTNLTVSGQLEGELGATSLGAIYTFGPTFRAEN 230

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             + R   EF+ ++ E++F+++D++++  E+ ++
Sbjct: 231 SNTPRHLAEFWMVEPEVAFIDKDELMDLEEDFIK 264



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + +L    + G+ +EV    +       + G  PHGG   G +R+++ 
Sbjct: 386 EIIGGSVREENYDKLLAEIDSRGMKREV----YDWYLDTRKYGTCPHGGFGLGFERLILF 441

Query: 550 LLGAKNVREVSLF 562
           + G +N+R+V  F
Sbjct: 442 VTGMQNIRDVIPF 454


>gi|327470680|gb|EGF16136.1| lysine--tRNA ligase [Streptococcus sanguinis SK330]
 gi|332358916|gb|EGJ36737.1| lysine--tRNA ligase [Streptococcus sanguinis SK49]
 gi|332362485|gb|EGJ40285.1| lysine--tRNA ligase [Streptococcus sanguinis SK1056]
 gi|332367177|gb|EGJ44913.1| lysine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 496

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  I+D  G  Q+    D+     +EI K       L I+G +M 
Sbjct: 65  IAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGEENYEIFKKADLGDFLGIEGEIMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A  +  LS A   PLP  F      E+I ++ R+LDL   R+
Sbjct: 125 TD---------MGELSIKATHLTHLSKALR-PLPEKFHGLTDVETI-YRKRYLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     Q     L  
Sbjct: 174 SFER-FVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQDIMDLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|324994794|gb|EGC26707.1| lysine--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 496

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  I+D  G  Q+    D+     +EI K       L I+G +M 
Sbjct: 65  IAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGEENYEIFKKADLGDFLGIEGEIMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A  +  LS A   PLP  F      E+I ++ R+LDL   R+
Sbjct: 125 TD---------MGELSIKATHLTHLSKALR-PLPEKFHGLTDVETI-YRKRYLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     Q     L  
Sbjct: 174 SFER-FVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQDIMDLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|296329584|ref|ZP_06872070.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305672781|ref|YP_003864452.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296153327|gb|EFG94190.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305411024|gb|ADM36142.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 499

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 126/282 (44%), Gaps = 37/282 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  ++D  G  Q+    DS     +EI KS     ++ + G V
Sbjct: 65  VTIAGRMMTKRGKGKAGFAHLQDLEGQIQIYVRKDSVGDDQYEIFKSSDLGDLIGVTGKV 124

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--R 134
              +          G++ + A   E+L+ A   LP    G ++  +  R++ R+LDL   
Sbjct: 125 FKTNV---------GELSVKATSFELLTKALRPLPDKYHGLKDVEQ--RYRQRYLDLIVN 173

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFY 192
            D+ H   + R++II +MR  +    ++E  TP +  S P GA  R F+          Y
Sbjct: 174 PDSKH-TFIARSKIIQAMRRYLDDHGYLEVETPTM-HSIPGGASARPFITHHNALDIPLY 231

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++ 
Sbjct: 232 -MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDIMSL 289

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            EN++  + +E     T+              +YG ++ DL+
Sbjct: 290 TENLVAHIAQEVLGTTTI--------------QYGEEQIDLK 317



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 459 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFP 494


>gi|242033765|ref|XP_002464277.1| hypothetical protein SORBIDRAFT_01g015530 [Sorghum bicolor]
 gi|241918131|gb|EER91275.1| hypothetical protein SORBIDRAFT_01g015530 [Sorghum bicolor]
          Length = 613

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 86/174 (49%), Gaps = 13/174 (7%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R+LDL  +   ++I K R+++++ +R  +    F+E  TP++   +    AR 
Sbjct: 261 QETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDEREFLEVETPMMNMIAGGAAARP 320

Query: 180 FLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           F+   + +N   F  +  AP+ Y + L+  G DR ++I   FR+E       P EF   +
Sbjct: 321 FVTHHNELNMRLFMRI--APELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTTCE 377

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNG-------NTVSNNFLRICYDDAIRR 285
             M++ + +D++   E +L G+ +E + G       N V N  + I +    RR
Sbjct: 378 FYMAYADYNDLMELTETMLSGMVKELTGGYKIKYHANGVMNPPIEIDFTPPFRR 431



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ MLL  ++N++EV LFP
Sbjct: 572 ALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFP 607


>gi|171683941|ref|XP_001906912.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941931|emb|CAP67583.1| unnamed protein product [Podospora anserina S mat+]
          Length = 573

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 2/117 (1%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           R  + +  R  +    F E   P L A++ EG  +        + +F A  Q+PQ YKQ+
Sbjct: 263 RVEVKHLFRSYLREHGFKEFEPPCLIAAASEGGANVFRLPYFEKEAFLA--QSPQFYKQI 320

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + +G  R F + P FR E+  + R   EF  LD+EM   +  + L+ +E VL  +F
Sbjct: 321 EVLAGRKRVFCVGPVFRAENSNTPRHMTEFTGLDLEMEVTDYQEALHMLEGVLLHIF 377



 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 3/85 (3%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR-FGGLYRAFQCGMPPHGGIA 540
           YD+   G EI SGG R H    +       G+  +    R +  L+R  Q G PPH G  
Sbjct: 485 YDMFMRGQEILSGGQRIHDPVELEARLRTKGVDPKSPGIREYVDLFR--QVGAPPHAGGG 542

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G+DR+V   L   +V   + +P +
Sbjct: 543 IGLDRVVAWYLNLPSVHLAAYYPRT 567


>gi|326800729|ref|YP_004318548.1| asparaginyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326551493|gb|ADZ79878.1| Asparaginyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 481

 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 113/269 (42%), Gaps = 32/269 (11%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           L  +D G  V + GW+   R +    FL I D    G  QVV + ++      K + +  
Sbjct: 10  LNSTDFGKTVIVKGWIKTFRNNQ---FLAINDGSCLGNIQVVIDYENTDERTLKRLTTGA 66

Query: 70  VLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            + ++G+++         ++  GQ +E+ A +I IL  ++    P+  ++   E +R + 
Sbjct: 67  AVSVEGVLIE--------SLGKGQRVEVKASQISILGDSDPEKFPLQPKKHSLEFLR-EI 117

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDF 180
             L  R +T +     R  +  ++        F+   TPI+T S  EGA         D 
Sbjct: 118 AHLRFRTNTFNAVFKVRNALSFAVHRFFNERGFVYIHTPIITGSDAEGAGEMFKVTTLDL 177

Query: 181 LVPSRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLP 231
             P R + GS      F+          QL   L A  F   +   P FR E+  + R  
Sbjct: 178 DNPPRNDDGSINFKEDFFGKSTNLTVSGQLEGELAALAFGNIYTFGPTFRAENSNTTRHL 237

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            EF+ ++ EM+F E  D ++  E +L+ V
Sbjct: 238 AEFWMIEPEMAFYELKDNMDLAEELLKHV 266


>gi|328712348|ref|XP_001951614.2| PREDICTED: lysyl-tRNA synthetase-like isoform 1 [Acyrthosiphon
           pisum]
          Length = 595

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 118/243 (48%), Gaps = 14/243 (5%)

Query: 23  LSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           ++G VH +R  G  +IF D+R      QV+AN  +  +   +S  S+      G ++  +
Sbjct: 128 VAGRVHAIRESGPKLIFYDLRGEGVKIQVMAN--AKQYTTEESFLSDTSKIRRGDIIGVT 185

Query: 82  AETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLH 139
                     G++ +  Q I++L+     LP   +G ++  +  R++ R+LDL   + + 
Sbjct: 186 GSP--GKTKKGELSIFPQNIKLLTPCLHMLPHMHYGLKD--KETRYRQRYLDLIINEHVR 241

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYALPQA 197
              + R ++I+ +R  +    F+E  TP++   +    A+ F+   + +N   F  +  A
Sbjct: 242 NKFIVRAKVISYVRRFLDNLGFLEIETPMMNMIAGGATAKPFITHHNDLNMDLFMRV--A 299

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++   E++L
Sbjct: 300 PELYHKMLVVGGIDRVYEIGRQFRNEAIDLTHNP-EFTTCEFYMAYADYNDLMQITEDLL 358

Query: 258 RGV 260
            G+
Sbjct: 359 SGL 361



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP  G   GIDR+ M L  + N++EV  FP
Sbjct: 538 SLEYGLPPTAGWGLGIDRLTMFLTDSNNIKEVLFFP 573


>gi|327461043|gb|EGF07376.1| lysine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 496

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  I+D  G  Q+    D+     +EI K       L I+G +M 
Sbjct: 65  IAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGEENYEIFKKADLGDFLGIEGEIMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A  +  LS A   PLP  F      E+I ++ R+LDL   R+
Sbjct: 125 TD---------MGELSIKATHLTHLSKALR-PLPEKFHGLTDVETI-YRKRYLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     Q     L  
Sbjct: 174 SFER-FVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQDIMDLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|296090191|emb|CBI40010.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 4/151 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R+LDL  +   + I K R +II+ +R  +   +F+E  TP++   +    AR 
Sbjct: 309 QETRYRQRYLDLMLNMEVRQIFKTRAKIISYIRSFLDNLDFLEVETPMMNMIAGGAAARP 368

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  AP+ Y + L+  G DR ++I   FR+E       P EF   + 
Sbjct: 369 FVTHHNDLNMKLY-MRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTTCEF 426

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
            M+F + +D++   E +L G+ +E + G  +
Sbjct: 427 YMAFADYNDVMELTEKMLSGMVKELTGGYKI 457



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M+L  ++N++EV LFP
Sbjct: 620 ALEYGLPPTGGWGLGIDRLTMMLTDSQNIKEVLLFP 655


>gi|255948264|ref|XP_002564899.1| Pc22g08870 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591916|emb|CAP98175.1| Pc22g08870 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 577

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 120/287 (41%), Gaps = 27/287 (9%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           + G+ VR+ G VHR R    ++F+ + D YG  Q V   D        ++  E  + I G
Sbjct: 150 EAGTRVRVLGRVHRARAQKDVVFITLTDGYGYLQCVLTGDMVKTYDIMTLTLETSMSIHG 209

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFL 131
            + +   +    N      EL A   EI+  A    E +   V  + + P+++ +  R L
Sbjct: 210 EMRAVPPKQHAPN----DRELHADFFEIIGKAAGDKEAITTRVAPDAD-PQTL-YDNRHL 263

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR +T    +  R   + + R        +E + P +  +  EG           + ++
Sbjct: 264 VLRGETSSSVMKVRAATLRAFRKAFEETRMLEVTPPAMVQTQVEGGSTLFGFDYYGENAY 323

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  + S  D Y  + P FR E   + R   E+  ++ E+ F+   D+L+
Sbjct: 324 --LTQSSQLYLETCLPSLGDVYC-VCPSFRAEKSLTRRHLSEYTHIEAELDFITFTDLLD 380

Query: 252 TMENV-------------LRGVFEEFS-NGNTVSNNFLRICYDDAIR 284
            +E+V             + G  ++ + +    S  F R+ YDDAI+
Sbjct: 381 HLEDVICRVIDYTLAEPEIAGYIKQLNPDFKPPSRPFRRMKYDDAIQ 427


>gi|125718339|ref|YP_001035472.1| lysyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|323351244|ref|ZP_08086900.1| lysine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|166230594|sp|A3CP17|SYK_STRSV RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|125498256|gb|ABN44922.1| Lysyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
 gi|322122468|gb|EFX94179.1| lysine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|324991525|gb|EGC23458.1| lysine--tRNA ligase [Streptococcus sanguinis SK353]
 gi|324993887|gb|EGC25806.1| lysine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|325690836|gb|EGD32837.1| lysine--tRNA ligase [Streptococcus sanguinis SK115]
 gi|325696096|gb|EGD37987.1| lysine--tRNA ligase [Streptococcus sanguinis SK160]
 gi|327463149|gb|EGF09470.1| lysine--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327474760|gb|EGF20165.1| lysine--tRNA ligase [Streptococcus sanguinis SK408]
 gi|327489865|gb|EGF21654.1| lysine--tRNA ligase [Streptococcus sanguinis SK1058]
 gi|328946786|gb|EGG40924.1| lysine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 496

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  I+D  G  Q+    D+     +EI K       L I+G +M 
Sbjct: 65  IAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGEENYEIFKKADLGDFLGIEGEIMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A  +  LS A   PLP  F      E+I ++ R+LDL   R+
Sbjct: 125 TD---------MGELSIKATHLTHLSKALR-PLPEKFHGLTDVETI-YRKRYLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     Q     L  
Sbjct: 174 SFER-FVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQDIMDLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|253681525|ref|ZP_04862322.1| asparagine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561237|gb|EES90689.1| asparagine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 463

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 126/326 (38%), Gaps = 61/326 (18%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCID 74
           G  V++SGWV  +R      F+++ D   +   QVV   +   F EI+K   S  +    
Sbjct: 18  GKEVKISGWVRTLRASNKFGFIEVNDGSFFKNIQVVFGAELENFKEISKYAISSSISVEG 77

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            +V++  A+           E+ A+K+ +L    +   P+  +R   E +R       LR
Sbjct: 78  EVVITEGAKQ--------PFEIHAKKV-VLEGKSDADYPLQKKRHTFEYLR---SIAHLR 125

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   + V R R + +       ++  F+   TPI+T S  EGA +     RV      
Sbjct: 126 PRSNAFSAVFRVRSLAAYAIHKFFQDQGFVYVHTPIITGSDCEGAGEMF---RVTTLDMD 182

Query: 193 ALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
            LP+  Q                    Q +  + A  F   +   P FR E+  + R   
Sbjct: 183 NLPKDEQGNIDYKEDFFGKQSNLTVSGQLEAEIYALAFRNVYTFGPTFRAENSNTARHAS 242

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVS 271
           EF+ ++ EM+F E  D ++  E +++ +            EF N            N V+
Sbjct: 243 EFWMIEPEMAFAELKDYMDVAEEMVKYIINYVRENAPEEMEFFNKFIDKGLLERLDNVVN 302

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPI 297
           ++F RI Y +A+            P+
Sbjct: 303 SDFARISYTEAVEMLQKSGAQFEYPV 328


>gi|124808534|ref|XP_001348339.1| lysine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23497231|gb|AAN36778.1| lysine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 674

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 95/180 (52%), Gaps = 10/180 (5%)

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR--FLDLRRDTLHKNIVK-RT 146
           + G+I L  + I +LS +  LPLP   + +  + + +KYR  +LD   +   K+ +K R 
Sbjct: 243 LRGEITLHVKDIYMLSKSL-LPLP--DKYKGMKDVEYKYRKRYLDFLTNNDQKDKIKARY 299

Query: 147 RIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF-YALPQAPQQYKQLL 205
            II  +R  ++  NF+E  TPIL    P GA      + +   +    L  +P+ + + L
Sbjct: 300 DIIQEIRKYLLKRNFLEVDTPILQL-IPGGATAKPFETYLKSLNLILYLRISPELFLKKL 358

Query: 206 MASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           + SG  ++ F+++ CFR+E   S   P EF  L++  S+     ++N +E +++ +F++F
Sbjct: 359 IVSGISEQIFELSKCFRNEGLSSIHNP-EFTMLEIYKSYTNYKYMMNFVEKIIKHLFKKF 417


>gi|330752584|emb|CBL87530.1| lysyl-tRNA synthetase [uncultured Flavobacteria bacterium]
          Length = 567

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 122/256 (47%), Gaps = 19/256 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-G 75
           G  V ++G +   R  G   F ++ D  G  QV  N D  C    KS+ ++ +   +D G
Sbjct: 47  GKNVIVAGRLMSRRIQGSASFAEVLDSTGRIQVYFNRDVICPGENKSMYNDVFKKLLDIG 106

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP-------VFGEREYPESIRFK 127
            ++    +     +  GQ  ++ +  +IL+ +   LPLP       ++     PE +R++
Sbjct: 107 DIVGLEGKLFTTKV--GQQTVNVKNFKILNKSLRPLPLPKTDSEGNIYDAFNDPE-LRYR 163

Query: 128 YRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPS 184
            R++DL  +  + +  +KR++I  ++R  +  + ++E  TPIL    P G  AR F+   
Sbjct: 164 QRYVDLIVNPNVKETFIKRSKITTTIRDFLTEKGYLEVETPIL-QPIPGGAAARPFVTHH 222

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             +    Y L  A + Y + L+  GF+  F+ A  FR+E       P EF  +++ +++ 
Sbjct: 223 NAHNTKLY-LRIANELYLKRLIVGGFEGVFEFAKDFRNEGMDRTHNP-EFTVMELYVAYK 280

Query: 245 EQDDILNTMENVLRGV 260
           +   ++ T EN+L  +
Sbjct: 281 DYFWMMETTENLLESI 296



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 29/46 (63%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
           RA + GMPP  GI  GIDR+VML+    +++EV  FP  +   ++L
Sbjct: 456 RALEYGMPPTSGIGIGIDRLVMLMTNNTSIQEVLFFPQMKAEQEIL 501


>gi|225436215|ref|XP_002269584.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 619

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 4/151 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R+LDL  +   + I K R +II+ +R  +   +F+E  TP++   +    AR 
Sbjct: 252 QETRYRQRYLDLMLNMEVRQIFKTRAKIISYIRSFLDNLDFLEVETPMMNMIAGGAAARP 311

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  AP+ Y + L+  G DR ++I   FR+E       P EF   + 
Sbjct: 312 FVTHHNDLNMKLY-MRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTTCEF 369

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
            M+F + +D++   E +L G+ +E + G  +
Sbjct: 370 YMAFADYNDVMELTEKMLSGMVKELTGGYKI 400



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M+L  ++N++EV LFP
Sbjct: 563 ALEYGLPPTGGWGLGIDRLTMMLTDSQNIKEVLLFP 598


>gi|325687234|gb|EGD29256.1| lysine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 496

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  I+D  G  Q+    D+     +EI K       L I+G +M 
Sbjct: 65  IAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGEENYEIFKKADLGDFLGIEGEIMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A  +  LS A   PLP  F      E+I ++ R+LDL   R+
Sbjct: 125 TD---------MGELSIKATHLTHLSKALR-PLPEKFHGLTDVETI-YRKRYLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     Q     L  
Sbjct: 174 SFER-FVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQDIMDLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|16077150|ref|NP_387963.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221307892|ref|ZP_03589739.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221312214|ref|ZP_03594019.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221317147|ref|ZP_03598441.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221321410|ref|ZP_03602704.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|586058|sp|P37477|SYK_BACSU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|467470|dbj|BAA05316.1| lysyl-tRNA thynthetase [Bacillus subtilis]
 gi|2632349|emb|CAB11858.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 499

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 126/282 (44%), Gaps = 37/282 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  ++D  G  Q+    DS     +EI KS     ++ + G V
Sbjct: 65  VTIAGRMMTKRGKGKAGFAHLQDLEGQIQIYVRKDSVGDDQYEIFKSSDLGDLIGVTGKV 124

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--R 134
              +          G++ + A   E+L+ A   LP    G ++  +  R++ R+LDL   
Sbjct: 125 FKTNV---------GELSVKATSFELLTKALRPLPDKYHGLKDVEQ--RYRQRYLDLIVN 173

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFY 192
            D+ H   + R++II +MR  +    ++E  TP +  S P GA  R F+          Y
Sbjct: 174 PDSKH-TFITRSKIIQAMRRYLDDHGYLEVETPTM-HSIPGGASARPFITHHNALDIPLY 231

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++ 
Sbjct: 232 -MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDIMSL 289

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            EN++  + +E     T+              +YG ++ DL+
Sbjct: 290 TENLVAHIAQEVLGTTTI--------------QYGEEQIDLK 317



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 459 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFP 494


>gi|284041217|ref|YP_003391147.1| lysyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283820510|gb|ADB42348.1| lysyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 583

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 130/283 (45%), Gaps = 23/283 (8%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           T    DL   +    V+L+G +   R  G   F +I+D  G  Q     D  C    K++
Sbjct: 46  TEPETDLASDERWGNVQLAGRLMVFRISGSASFAEIQDSTGRMQFYFRRDDLCPGEDKTL 105

Query: 66  -RSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-------G 116
             + +   +D G ++            TG++ +  ++ +IL+ A   PLPV        G
Sbjct: 106 YNTVFKKLLDIGDIIGVKGHVFTTK--TGELSVYVKEFKILNKALR-PLPVVKEVVNEKG 162

Query: 117 EREY------PESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL 169
           E+E       PE  R++ R++DL  +   +++ +KRT+++NS+R  +  + ++E  TPIL
Sbjct: 163 EKETYDAFTDPEQ-RYRQRYVDLIVNPQVRDVFIKRTKLVNSIRQFLSEKGYLEVETPIL 221

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   AR F         + Y +  A + Y + L+  G+D  F+ A  FR+E     
Sbjct: 222 QPIHGGAAARPFRTHHNSLDMTLY-MRIANELYLKRLIVGGYDGVFEFAKDFRNEGMDRT 280

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
             P EF Q++  +++ +   +++T+E ++  V  + +    V+
Sbjct: 281 HNP-EFTQVEFYVAYKDYLWMMDTIEEMVEKVALDVAGTTKVT 322



 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 12/91 (13%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++ +CNG EIA+           R    E +  A      +  + E+      RA + G
Sbjct: 421 RFEAICNGKEIANAYSELNDPIDQRERFEEQLRLAERGDEEAMALDED----FLRALEYG 476

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP  G+  GIDR+ M++    ++++V  FP
Sbjct: 477 MPPTAGVGLGIDRLSMIMTNQSSIQDVLFFP 507


>gi|228989284|ref|ZP_04149277.1| Lysyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|229003090|ref|ZP_04160942.1| Lysyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228758173|gb|EEM07366.1| Lysyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228770494|gb|EEM19065.1| Lysyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 497

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 130/296 (43%), Gaps = 37/296 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + + G  V ++G +   R  G   F  I+D +G  Q+    D+     +E+  +     +
Sbjct: 56  LEEKGISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEQYELFNTADLGDL 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYR 129
           + I+G V   +          G++ + A    +L+ A   LP    G ++  +  R++ R
Sbjct: 116 VGIEGKVFKTNV---------GELSVKATGFTLLTKALRPLPDKYHGLKDVEQ--RYRQR 164

Query: 130 FLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
           +LDL      R+T     V R++II  MR  +    ++E  TP++ A +    AR F+  
Sbjct: 165 YLDLITSMESRETF----VTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITH 220

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++
Sbjct: 221 HNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAY 278

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY-GTD 289
            +  DI+   EN++  + ++     T+            + R+   DAI++Y G D
Sbjct: 279 ADYKDIMKLTENMIAHIAKQVLGTTTIQYGEQEINLEPEWTRLHMVDAIKQYSGAD 334



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFP 492


>gi|227903177|ref|ZP_04020982.1| lysyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227868982|gb|EEJ76403.1| lysyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 516

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 23/248 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F DI D  G  Q+    D      ++I K       L I+G V
Sbjct: 61  TKVAGRMLAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYKIFKKSDIGDFLGIEGEV 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--R 134
           M            TG++ + A  +  LS A   LP    G ++  E+I ++ R+LDL   
Sbjct: 121 MKTD---------TGELTIRALHVTFLSKALRPLPDKYHGLKDV-EAI-YRQRYLDLITN 169

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
           RD+  +  V RT+II ++R  +  ++F+E  TP+L  + P G  AR F+          Y
Sbjct: 170 RDSYMR-FVHRTQIIQAIRDYLNKQDFMEVETPVL-HNIPGGAEARPFITHHNALDIDLY 227

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                    K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++ 
Sbjct: 228 MRIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELETYAAYWDFHDVMDE 285

Query: 253 MENVLRGV 260
            E ++R  
Sbjct: 286 AEGIIRAA 293



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 454 RAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 490


>gi|226322857|ref|ZP_03798375.1| hypothetical protein COPCOM_00629 [Coprococcus comes ATCC 27758]
 gi|225208643|gb|EEG90997.1| hypothetical protein COPCOM_00629 [Coprococcus comes ATCC 27758]
          Length = 72

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 4/67 (5%)

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  +++++  +  G+++E +E         F+ GMPPHGG+  G++R+ M LLG  NV
Sbjct: 2   RIHDYDMLMEKLAKRGMTEEGLETYLD----TFKHGMPPHGGLGIGMERLTMQLLGEDNV 57

Query: 557 REVSLFP 563
           RE +LFP
Sbjct: 58  RETTLFP 64


>gi|195484386|ref|XP_002090672.1| GE12667 [Drosophila yakuba]
 gi|194176773|gb|EDW90384.1| GE12667 [Drosophila yakuba]
          Length = 558

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 116/295 (39%), Gaps = 39/295 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G ++  S V++ GWVHR+R  G  +IF+ +RD  G  Q V N D  C             
Sbjct: 130 GTANRDSRVKIYGWVHRLRRQGKSLIFITLRDGTGFLQCVLN-DQLC------------Q 176

Query: 72  CIDGLVMSRSAETI---------NANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             D L +S  +  +               G  EL+    E++ +A           E   
Sbjct: 177 TYDALTLSTESSVVLFGTLKLVPEGKTAPGGHELNVDYWELIGLAPPGGADAILNEEAQP 236

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++   R + +R +   K +  R+ +  + R    A  + E + P L  +  EG      
Sbjct: 237 DVQLDNRHIMIRGENTSKVLKMRSVVTQAFRAHYEARGYNEVTPPTLVQTQVEGGSTLFK 296

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                + ++  L Q+ Q Y +  + +  D  F I+  +R E  R+ R   E+  ++ E  
Sbjct: 297 LKYFGEEAY--LTQSSQLYLETCLPALGD-VFTISQSYRAEQSRTRRHLAEYSHVEAECP 353

Query: 243 FV--------EQDDILNTMENVLRG-----VFEEFSNGNTVSNNFLRICYDDAIR 284
           F+         +D + + ++ VL+      V E   +       F R+ Y+DAI+
Sbjct: 354 FLTFDDLLDRLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRRMNYEDAIK 408



 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R + SE +L+ ++  GI  +     +    R +  G  PHGG   G+
Sbjct: 475 LLPNVGEIVGGSMRIYDSEELLKGYAREGIDPKPY--YWYTDQRVY--GTMPHGGYGLGL 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  LL   ++REV L+P   + C
Sbjct: 531 ERFLCWLLNRYHIREVCLYPRFLDRC 556


>gi|210620796|ref|ZP_03292247.1| hypothetical protein CLOHIR_00190 [Clostridium hiranonis DSM 13275]
 gi|210155146|gb|EEA86152.1| hypothetical protein CLOHIR_00190 [Clostridium hiranonis DSM 13275]
          Length = 495

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 70/327 (21%), Positives = 128/327 (39%), Gaps = 57/327 (17%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVL 71
           + VG  V+++GW+   R      F+++ D   +   Q+V +     F EI K   S  +L
Sbjct: 47  AHVGQTVKVAGWIRTSRMSKNFGFIELNDGSFFKNMQIVLDEKLENFKEIGKLPISSSIL 106

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
               LV +  A+          +E+ A K+E+  +++    P+  +R   E +R     L
Sbjct: 107 VEGELVSTEGAKQ--------PVEIHATKVEVEGMSDS-SYPLQKKRHTLEYLR-TIAHL 156

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
             R +T       R+    ++       NF+   +PI+T S  EGA +     R+     
Sbjct: 157 RPRSNTFSAVFRVRSLAAYAIHKFFQERNFVYAHSPIITGSDCEGAGEMF---RLTTLDM 213

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             LP+  +                    Q    +MA  F   +   P FR E+  + R  
Sbjct: 214 ENLPRTEEGKIDYSKDFFGKEANLTVSGQLNAEIMALAFRNVYTFGPTFRAENSYTGRHA 273

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTV 270
            EF+ ++ E+ F + +D +   E++++ +            +F N            N V
Sbjct: 274 SEFWMIEPEIVFADLEDNMELAEDMIKYIINYVMENAPEEMQFFNSFIDKGLLERLNNVV 333

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F+RI Y  AI        +  NP+
Sbjct: 334 NSDFVRITYTKAIELLLESGHEFENPV 360


>gi|238853553|ref|ZP_04643925.1| lysine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282852632|ref|ZP_06261974.1| lysine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|238833849|gb|EEQ26114.1| lysine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282556374|gb|EFB61994.1| lysine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 513

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 23/248 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      ++I K       L IDG V
Sbjct: 61  TKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIDGEV 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           M            TG++ + A  +  LS A   PLP   +        ++ R+LDL   T
Sbjct: 121 MKTD---------TGELTIRATHVTFLSKALR-PLPNKWDGLKDVEQIYRQRYLDLI--T 168

Query: 138 LHKN---IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
            H++    V RT+II ++R  +  ++F+E  TP+L  + P G  AR F+          Y
Sbjct: 169 NHESYMRFVHRTQIIQAIRNYLNKQDFLEVETPVL-HNIPGGAEARPFITHHNALDIDLY 227

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                    K+L++  G +R ++I   FR+E   +   P EF +L+   ++ +  D+++ 
Sbjct: 228 MRIALELPLKRLIVG-GMERVYEIGRVFRNEGVDTRHNP-EFTELETYAAYWDFHDVMDE 285

Query: 253 MENVLRGV 260
            E ++R  
Sbjct: 286 AEEIIRAA 293



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 454 RAMEFGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 490


>gi|188584759|ref|YP_001916304.1| lysyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349446|gb|ACB83716.1| lysyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 489

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 19/243 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEIAKSVRSEWVLCIDGLV 77
           V LSG +   R HG   F  I+D  G  Q+   V N     +E+ K +    ++ + G V
Sbjct: 53  VSLSGRIMAKRGHGKAGFAHIQDSSGQVQIYTRVDNVGEEDYELYKELDIGDIIALKGPV 112

Query: 78  -MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
            M+R           G+I +  ++  + S +   PLP          +R++ R+LDL   
Sbjct: 113 FMTRK----------GEITVEVKEFHLQSKSLR-PLPEKWHGLKDVDLRYRKRYLDLIMN 161

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
             +    V R++II  MR  +    F E  TP L T      AR F       +   Y +
Sbjct: 162 QDVKDTFVIRSKIIREMRRYLDDRGFFEMETPTLHTIPGGANARPFKTYHNALEMKLY-M 220

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  GFD+ +++   FR+E   +   P EF  +++  S  +  D++   E
Sbjct: 221 RIATELHLKRLIVGGFDKVYELGRIFRNEGISTKHNP-EFTSIELYQSNSDYHDMMELTE 279

Query: 255 NVL 257
           N++
Sbjct: 280 NMI 282



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VM +  + ++R+V LFP
Sbjct: 446 ALEYGMPPTGGLGIGIDRLVMFMTNSTSIRDVILFP 481


>gi|269469091|gb|EEZ80642.1| lysyl-tRNA synthetase, class II [uncultured SUP05 cluster
           bacterium]
          Length = 496

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 19/277 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D     Q+ A  D            +W +   G ++  
Sbjct: 59  VSVAGRMMLKRVMGKASFATLQDSSAKIQIFATRDELPEGFYNEQFKKWDI---GDIIGA 115

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N+  G++ +   +I++L+ +   PLP        + IR++ R++DL      +
Sbjct: 116 VGTLFKTNV--GELSIRISQIKLLTKSLR-PLPEKFHGLADQEIRYRQRYVDLIVSEDSR 172

Query: 141 NIVKR-TRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAP 198
           N+ KR ++I+  +R      +FIE  TP+L T      A+ F           Y L  AP
Sbjct: 173 NVFKRRSQIVAYIRNFFNEFDFIEVETPMLQTIPGGATAKPFETHHNALDIGMY-LRIAP 231

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  G D+ F+I   FR+E   +   P EF  ++   ++    D+++  E + R
Sbjct: 232 ELYLKRLIVGGMDKVFEINRNFRNEGLSTRHNP-EFTMIEFYQAYATYHDLMDLTEQLFR 290

Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286
           G+  +    +++         S +F RI   D+I +Y
Sbjct: 291 GIAVDVCGNSSIHYQGDDFDFSKSFDRISVFDSILKY 327



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    + +E     F      K+  ++    +   Y RA + GMPP 
Sbjct: 403 RFELFIGGREIANGFSELNDAEDQATRFKAQVAEKDAGDDEAMHYDADYIRALEYGMPPT 462

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML   + ++R+V LFP
Sbjct: 463 AGEGIGIDRLVMLFTDSPSIRDVLLFP 489


>gi|328712346|ref|XP_003244783.1| PREDICTED: lysyl-tRNA synthetase-like isoform 2 [Acyrthosiphon
           pisum]
          Length = 579

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 118/243 (48%), Gaps = 14/243 (5%)

Query: 23  LSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           ++G VH +R  G  +IF D+R      QV+AN  +  +   +S  S+      G ++  +
Sbjct: 112 VAGRVHAIRESGPKLIFYDLRGEGVKIQVMAN--AKQYTTEESFLSDTSKIRRGDIIGVT 169

Query: 82  AETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLH 139
                     G++ +  Q I++L+     LP   +G ++  +  R++ R+LDL   + + 
Sbjct: 170 GSP--GKTKKGELSIFPQNIKLLTPCLHMLPHMHYGLKD--KETRYRQRYLDLIINEHVR 225

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYALPQA 197
              + R ++I+ +R  +    F+E  TP++   +    A+ F+   + +N   F  +  A
Sbjct: 226 NKFIVRAKVISYVRRFLDNLGFLEIETPMMNMIAGGATAKPFITHHNDLNMDLFMRV--A 283

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++   E++L
Sbjct: 284 PELYHKMLVVGGIDRVYEIGRQFRNEAIDLTHNP-EFTTCEFYMAYADYNDLMQITEDLL 342

Query: 258 RGV 260
            G+
Sbjct: 343 SGL 345



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP  G   GIDR+ M L  + N++EV  FP
Sbjct: 522 SLEYGLPPTAGWGLGIDRLTMFLTDSNNIKEVLFFP 557


>gi|319938836|ref|ZP_08013200.1| lysyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319811886|gb|EFW08152.1| lysyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 495

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 118/263 (44%), Gaps = 19/263 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + ++     ++G +   R  G + F  I+D  G  Q+    D+     ++I K       
Sbjct: 56  LHELAETATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDTVGEENYQIFKKADIGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L I+G +M             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGIEGEIMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R+RI++ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSRIVSEIRRYLDNQGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R +++   FR+E   +   P EF  ++   ++ + +
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEMGRIFRNEGMDATHNP-EFTTIEAYQAYADFE 282

Query: 248 DILNTMENVLRGVFEEFSNGNTV 270
           DI++  E +++   +  ++  +V
Sbjct: 283 DIMDLTEGIIQSAAKAVTDAESV 305



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR++MLL    ++R+V 
Sbjct: 430 LSRFEAQAQAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLIMLLTDVTSIRDVL 489

Query: 561 LFP 563
           LFP
Sbjct: 490 LFP 492


>gi|300859194|ref|YP_003784177.1| lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686648|gb|ADK29570.1| lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|302331450|gb|ADL21644.1| Lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 518

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 117/256 (45%), Gaps = 16/256 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYG--ITQVVANPDSACFEIAKSVRSEWVLCID-GLV 77
           V ++G V  VR  G + F  +++  G  I  +++       E+     ++W   +D G +
Sbjct: 76  VAIAGRVLFVRNTGKLCFAALQEGNGEHIQAMLS-----LAEVGADALADWKAHVDLGDI 130

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRD 136
           +S     I +    G++ +  Q  ++ S +   PLPV    +  E  R ++R+ DL  R+
Sbjct: 131 VSVRGRVIASK--RGELSVMVQSWQMASKSLR-PLPV-AFADMSEDTRIRHRYTDLIMRE 186

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
               N + R +++ S+R  + +  F+E  TP+L T      AR F   S       Y L 
Sbjct: 187 EARNNALTRIKVMRSLRNFLESRGFLEVETPMLQTLHGGAAARPFETHSNALDIDLY-LR 245

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y +  +  G +R F++   FR+E   S   P EF  L+   ++   DD     ++
Sbjct: 246 IAPELYLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFSMLETYQAYGTYDDGAKLHQD 304

Query: 256 VLRGVFEEFSNGNTVS 271
           +++ + ++     TV+
Sbjct: 305 MIQYIAKDVFGSTTVT 320



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        I+    E   +  +       V++  F     A + GM
Sbjct: 427 KWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMVLDEDF---LTAMEQGM 483

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   GIDR++M L G   +RE  LFPM
Sbjct: 484 PPTSGTGMGIDRLLMALTGL-GIRETVLFPM 513


>gi|291515937|emb|CBK65147.1| asparaginyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 462

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 106/263 (40%), Gaps = 31/263 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCID 74
           V + V + GWV   R +  + F+ + D    G  QVV +      E  K V +   L +D
Sbjct: 15  VDTDVVVKGWVRTKRGNKNVAFIALNDGSCVGNIQVVVDLAKISEEQLKPVTTGACLRVD 74

Query: 75  G-LVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           G LV S  A         GQ +E+ A+KIE+   A+    P+  +    E +R +  +L 
Sbjct: 75  GRLVASPGA---------GQGVEVQAEKIEVYGTADPESYPLQKKGHSLEFLR-EIAYLR 124

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R +T    +  R  +  ++        F    TPI+TAS  EGA      + ++  +  
Sbjct: 125 PRTNTFGAVLRIRHAMAYAIHEYFNKHGFYYFHTPIITASDCEGAGAMFQVTTLDMNNLP 184

Query: 193 ALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
              +    Y Q                  L A    R +   P FR E+  + R   EF+
Sbjct: 185 RTGEGAVDYAQDFFGKACNLTVSGQLEGELGALSLGRIYTFGPTFRAENSNTPRHASEFW 244

Query: 236 QLDMEMSFVEQDDILNTMENVLR 258
            ++ E +F E +D +   E+ L+
Sbjct: 245 MIEPEAAFFELEDNMELAEDFLK 267



 Score = 37.7 bits (86), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 14/40 (35%), Positives = 21/40 (52%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G  PH G   G DR+++ + G  N+R+V  FP +    D 
Sbjct: 423 GSAPHSGFGLGFDRLLLFVTGMTNIRDVQPFPRTPQHADF 462


>gi|119470491|ref|ZP_01613194.1| lysyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119446192|gb|EAW27469.1| lysyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 511

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 137/318 (43%), Gaps = 41/318 (12%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV A+ D     + K +++++     G ++        +    G + + 
Sbjct: 76  FMSIQDMKGRVQVYASKD-----VQKDLKAKYGQLDIGDIIGVKGPLNKSG--KGDLYVD 128

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRM 156
             + E+L+ +   PLP        +  +++ R++DL  +   +   + R++++  +R  +
Sbjct: 129 MAEYELLTKSLR-PLPEKFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVEGIRRFL 187

Query: 157 IAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
              +F+E  TP+L    P GA  R F+          Y L  AP+ Y + L+  GFDR F
Sbjct: 188 ADRDFMEVETPMLQVI-PGGASARPFVTHHNALDIDMY-LRIAPELYLKRLVVGGFDRVF 245

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN- 273
           +I   FR+E   +   P EF  ++   ++ +  D++N  E++LR V         V N  
Sbjct: 246 EINRNFRNEGLSTRHNP-EFTMIEFYQAYADYIDLMNITEDMLRTVATNVLGSPIVVNTT 304

Query: 274 ------------------FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
                             F R+   DAI +Y    P+  +  + ++   HF   E + ++
Sbjct: 305 KDENGEVIDSVEYDFGKPFERLSMADAILKYN---PEF-DAAVFNDPENHF--EELKAYA 358

Query: 316 KILSVN-PGYEVWAIPAK 332
           K + V  P   VW  P K
Sbjct: 359 KQVHVKIPENCVWG-PGK 375



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VML   +  +++V LFP
Sbjct: 468 RALEYGLPPTAGEGIGIDRLVMLFTDSSTIKDVILFP 504


>gi|118617265|ref|YP_905597.1| lysyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118569375|gb|ABL04126.1| lysyl-tRNA synthetase 2 LysX [Mycobacterium ulcerans Agy99]
          Length = 1097

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 15/223 (6%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      +D  + V +SG + RVR +GG++F  +RD  G  QV+ +       + +  
Sbjct: 643 THTVAQAMDADDQASVSVSGRILRVRNYGGVLFAHLRDWSGEIQVLLDNS----RLGQGR 698

Query: 66  RSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPES 123
            +++   ID G ++  + +  ++   TG   L  ++  ++      PLP  +     PE+
Sbjct: 699 AADFNAAIDLGDLVEMTGQMGSSK--TGTRSLIVRRWRLIGKCLR-PLPNKWNGLTDPEA 755

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
            R + R++DL  +   + ++  R+ ++ S+R  + A+ FIE  TPIL        AR F+
Sbjct: 756 -RVRTRYVDLAVNAESRTLITARSAVLRSVRETLSAKGFIEVETPILQQVHGGATARPFI 814

Query: 182 VPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 815 --THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 855



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 29/40 (72%), Gaps = 1/40 (2%)

Query: 527  RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +A +  MPP GG+  G+DR+VML+ G +++RE   FP+++
Sbjct: 1057 QAMEYAMPPTGGLGMGVDRVVMLITG-RSIRETLPFPLAK 1095


>gi|325116654|emb|CBZ52207.1| putative lysyl-tRNA synthetase [Neospora caninum Liverpool]
          Length = 598

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 112/248 (45%), Gaps = 26/248 (10%)

Query: 21  VRLSGWVHRVRPHGGII-FLDIRDHYGITQVVAN-----PDSACF-EIAKSVRSEWVLCI 73
           V+++G + RV   G  + F DIR      QV++N       +  F EI    R   V+ I
Sbjct: 125 VQIAGRITRVSASGQKLRFYDIRGDGEKIQVMSNFSYHDEKAGDFSEIHNRFRRGDVIGI 184

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--SIRFKYRFL 131
            G                G++ +  +++ +LS      L +  ER   +   +RF++R+L
Sbjct: 185 RGF---------PGKSKRGELSIFPREVTLLSPC----LHMLPERNTLKDFEVRFRHRYL 231

Query: 132 DL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL   D   K  + R+RI+N +R  + A  F+E  TP++   +    AR F         
Sbjct: 232 DLIVNDETRKTFLIRSRIVNFLRHFLEARGFVEVETPMMNVIAGGAAARPFKTHHNDLDM 291

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y +  AP+ + ++L+  G DR F+I   FR+E       P EF   +   ++ + +D+
Sbjct: 292 DLY-MRIAPELFLKMLIVGGLDRVFEIGKNFRNEGIDMTHNP-EFTACEFYWAYADYNDL 349

Query: 250 LNTMENVL 257
           ++  E +L
Sbjct: 350 MDLTEELL 357



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L     ++EV LFP
Sbjct: 534 ALEYGLPPTGGWGLGIDRLTMFLSDHNTIKEVILFP 569


>gi|328955978|ref|YP_004373311.1| lysyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456302|gb|AEB07496.1| lysyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 508

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 28/267 (10%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID---G 75
            V ++G V   R  G I F+ +RD  G  Q+        F     +R E W L  D   G
Sbjct: 72  IVSVAGRVMAKRGQGKIAFIVVRDPTGEIQL--------FCRINDMRDEDWALVRDLDLG 123

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-R 134
            +++ S   +      GQ+ ++   + +L+ +   PLP        +  R++ R++DL  
Sbjct: 124 DIVNVSGCVVRTR--RGQLSIAPTSVALLAKSVR-PLPEKFHGLSDKETRYRQRYVDLIM 180

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV-PSRVNQGSFY 192
            D +     KR+RI+++ R  M A+ + E  TPIL        A+ F+   + +NQ ++ 
Sbjct: 181 NDEVRSTFEKRSRILSAFRRHMDADGYFEVETPILQNIQGGATAKPFITHHNALNQENYL 240

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  A + + + L+  GF+R ++I   FR+E       P EF  ++   ++ +    L  
Sbjct: 241 RI--ATELHLKRLLVGGFERVYEIGRIFRNEGMDQTHNP-EFTTMEAYRAYSD----LEG 293

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICY 279
           M+ + +GV +     N   N+  RI Y
Sbjct: 294 MKALAQGVIK---AANAAVNSSERIDY 317



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GGI  G+DR+VMLL  + ++R+V LFP
Sbjct: 466 RALEYGMPPAGGIGIGVDRVVMLLTNSASIRDVLLFP 502


>gi|297804454|ref|XP_002870111.1| hypothetical protein ARALYDRAFT_914989 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315947|gb|EFH46370.1| hypothetical protein ARALYDRAFT_914989 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 567

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 110/273 (40%), Gaps = 46/273 (16%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRS 67
            D G+  VG  + + GWV  +R    + F++I D   ++  Q V N D+  ++  +S   
Sbjct: 101 ADEGLGRVGQSLNIMGWVRTLRSQSSVTFIEINDGSCLSNLQCVMNSDAEGYDQVES--- 157

Query: 68  EWVLCIDGLVMSRSAETINANIITGQ-----IELSAQKIEILSVAEELPLPVFGEREYPE 122
                  G +++ ++ ++   I+  Q     +EL  +KI ++   +    P+  +R   E
Sbjct: 158 -------GSILTGASVSVQGTIVASQGTKQKVELKVEKIIVVGKCDS-SYPIQKKRVSRE 209

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD--- 179
            +R K   L  R +T       R  +  +         F+  ++PI+TAS  EGA +   
Sbjct: 210 FLRTKAH-LRPRTNTFGAVARVRNTLAYATHKFFQESGFVWVASPIITASDCEGAGEQFC 268

Query: 180 --FLVPS--RVNQGSFYALPQA--------------------PQQYKQLLMASGFDRYFQ 215
              L+PS       S  A+P+                       Q      A+     + 
Sbjct: 269 VTTLIPSSHENTDTSIDAIPKTKGGLIDWSQDFFGKPAFLTVSGQLNGETYATALSDVYT 328

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             P FR E+  + R   EF+ ++ E++F + DD
Sbjct: 329 FGPTFRAENSNTSRHLAEFWMIEPELAFADLDD 361


>gi|70989089|ref|XP_749394.1| aspartyl-tRNA synthetase Dps1 [Aspergillus fumigatus Af293]
 gi|66847025|gb|EAL87356.1| aspartyl-tRNA synthetase Dps1, putative [Aspergillus fumigatus
           Af293]
 gi|159128809|gb|EDP53923.1| aspartyl-tRNA synthetase Dps1, putative [Aspergillus fumigatus
           A1163]
          Length = 555

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 35/214 (16%)

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF-GEREYPESI--- 124
           ++ + G+V   +    +A +    +E+  QK+ ++S  A+ LP+ V   ER  PE+    
Sbjct: 151 IVQVTGIVKKPAIPISSATL--SDLEIHIQKVYMISEAAQMLPMQVKDAERPPPETTEEG 208

Query: 125 ---------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS---- 165
                          R   R LDL+ +T      +    I+S    + AE  I+      
Sbjct: 209 NLVDAEGAPIVTLKTRLDNRVLDLQTET-----SQAITWISSGVAELFAEYMIKSGSRWI 263

Query: 166 -TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP L  ++ EG  +        + ++ A  Q+PQ YKQ+ +A   +  F+IAP FR ED
Sbjct: 264 FTPKLVGAATEGGSNVFEVKYFKRNAYLA--QSPQLYKQMCIAGDMESVFEIAPVFRAED 321

Query: 225 PRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257
             + R   EF  LD E +F     ++L   EN+L
Sbjct: 322 SNTHRHLTEFAGLDFEKTFRSHYHEVLEFAENLL 355



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R +  + + ++    G+  +  +  F     AF+ G PPH G   
Sbjct: 468 YDFFMRGEEIMSGAQRINDIKELEESMIAKGLDPK--QEGFEDYLAAFRQGCPPHAGGGL 525

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIVM  LG  NVR  SLFP
Sbjct: 526 GLNRIVMFFLGLPNVRLASLFP 547


>gi|296439734|sp|A0PP57|LYSX_MYCUA RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
          Length = 1105

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 15/223 (6%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      +D  + V +SG + RVR +GG++F  +RD  G  QV+ +       + +  
Sbjct: 651 THTVAQAMDADDQASVSVSGRILRVRNYGGVLFAHLRDWSGEIQVLLDNS----RLGQGR 706

Query: 66  RSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPES 123
            +++   ID G ++  + +  ++   TG   L  ++  ++      PLP  +     PE+
Sbjct: 707 AADFNAAIDLGDLVEMTGQMGSSK--TGTRSLIVRRWRLIGKCLR-PLPNKWNGLTDPEA 763

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
            R + R++DL  +   + ++  R+ ++ S+R  + A+ FIE  TPIL        AR F+
Sbjct: 764 -RVRTRYVDLAVNAESRTLITARSAVLRSVRETLSAKGFIEVETPILQQVHGGATARPFI 822

Query: 182 VPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 823 --THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 863



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 29/40 (72%), Gaps = 1/40 (2%)

Query: 527  RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +A +  MPP GG+  G+DR+VML+ G +++RE   FP+++
Sbjct: 1065 QAMEYAMPPTGGLGMGVDRVVMLITG-RSIRETLPFPLAK 1103


>gi|254881511|ref|ZP_05254221.1| lysyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294775452|ref|ZP_06740965.1| lysine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319642896|ref|ZP_07997532.1| lysyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|254834304|gb|EET14613.1| lysyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294450693|gb|EFG19180.1| lysine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317385444|gb|EFV66387.1| lysyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 576

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 103/213 (48%), Gaps = 13/213 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV    D  C +  K + +     +  L    
Sbjct: 55  VSVAGRMMSRRVMGKASFIELQDSKGRIQVYITRDDICPDENKEMYNTVFKRLLDLGDFI 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             E        G+I + A+++ +LS + + PLP+        + + E PE +R++ R++D
Sbjct: 115 GIEGFVFRTQMGEISIHAKRLTVLSKSIK-PLPIVKYKDGVAYDKFEDPE-LRYRQRYVD 172

Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   K+I +KR+++ +SMR    ++ ++E  TPIL + +    AR F+         
Sbjct: 173 LAVNEEIKDIFIKRSKVYSSMREYFNSKGYMEVETPILQSIAGGAAARPFITHHNALDMP 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            Y +  A + Y + L+  GF+  ++I   FR+E
Sbjct: 233 LY-MRIASELYLKRLIVGGFEGVYEIGKNFRNE 264



 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+ ML+ G   ++EV  FP
Sbjct: 460 RALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFP 496


>gi|224824517|ref|ZP_03697624.1| lysyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603010|gb|EEG09186.1| lysyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 500

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 120/267 (44%), Gaps = 21/267 (7%)

Query: 31  RPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANII 90
           R  G   F  ++D  G  Q+  + D    E     +  W +   G +++           
Sbjct: 76  RVMGKASFATLQDGSGRIQIFVSNDKTGLEQHDQFK-HWDM---GDIVAARGTLFKTK-- 129

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRII 149
           TG++ + A ++ +LS +   PLP        +  +++ R+LDL  +   +++  KR++I+
Sbjct: 130 TGELTVQANEVRLLSKSIR-PLPEKFHGLTDQEQKYRQRYLDLIMNEQSRDVFTKRSQIV 188

Query: 150 NSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
             +R  M+ E ++E  TP++    P G  A+ F+          Y L  AP+ Y + L+ 
Sbjct: 189 QGIRSYMVDEGYLEVETPMM-HPIPGGATAKPFVTHHNALDMPLY-LRIAPELYLKRLVV 246

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF--- 264
            G +R F+I   FR+E   +   P EF  ++   ++ +   ++   E V++ + ++    
Sbjct: 247 GGLERVFEINRNFRNEGMSTRHNP-EFTMMEFYEAYSDYQRMMEMTEGVIQKLAKDILGT 305

Query: 265 ----SNGNTVS-NNFLRICYDDAIRRY 286
                 G TV  + F R+    AI++Y
Sbjct: 306 LHIQYQGKTVDLSKFERLTIVGAIKKY 332



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 459 RALEFGLPPTGGCGIGIDRLVMLLTDSPSIRDVILFP 495


>gi|163783340|ref|ZP_02178333.1| lysyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881448|gb|EDP74959.1| lysyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 570

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 20/282 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L G +  +R  G  IF  I+D  G  Q+    D    E   S+ +E++    G ++  
Sbjct: 134 VSLGGRLVALRTMGKAIFGHIQDLTGRIQIYLRKDIVGDE-NFSLFNEFIDL--GDIVGV 190

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLH 139
             E       TG++ +     E+L+     PLP          +R++ R+LDL  +    
Sbjct: 191 EGELFRTQ--TGELTVEVHSFELLAKCLH-PLPEKWHGLKDVEVRYRQRYLDLIANPDAR 247

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAP 198
           K  + R+R+I+ +R       F+E  TPIL T +S   A+ F+      + + Y L  AP
Sbjct: 248 KTFLLRSRLISELRRFFDDRGFVEVETPILQTVASGANAKPFMTYHNYLEMNLY-LRIAP 306

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF R +++   FR+E       P EF  ++   ++ + +D++   E +  
Sbjct: 307 ELYLKRLIVGGFPRVYELGKNFRNEGVDRTHNP-EFTMVEFYAAYWDYNDLMKFTEKLFV 365

Query: 259 GVFEEFSNGNTVSNN---------FLRICYDDAIR-RYGTDK 290
            + E       +S           F R+ Y D ++ + G DK
Sbjct: 366 HLLERTVGTLKLSYEGVELDFSPPFRRVSYFDLLKEKTGKDK 407



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIR----NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +++L+   +E+A+            E  L+      +  E   +      RA + GMPP 
Sbjct: 479 RFELIVATYEVANAYTELNDPADQKERFLEQLKEKEMGDEEAMDMDEDFIRALEYGMPPT 538

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL     +R+V LFP
Sbjct: 539 AGEGIGIDRLVMLLTNTDTIRDVILFP 565


>gi|312864673|ref|ZP_07724904.1| asparagine--tRNA ligase [Streptococcus downei F0415]
 gi|311099800|gb|EFQ58013.1| asparagine--tRNA ligase [Streptococcus downei F0415]
          Length = 448

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 113/296 (38%), Gaps = 44/296 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V +  WV      G + FL +RD     Q VA   +   +  +    E    I  L
Sbjct: 15  LGQEVTIGAWVANKSGKGKLAFLQLRDGTAFFQGVAFKPNFIEKYGEEEGLEKFNQIKHL 74

Query: 77  VMSRSAETINANIITGQI----------ELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               S       ++TG I          E+    +E++  + + P+     +E+      
Sbjct: 75  SQETSV------LVTGTIKEDDRSKFGYEMDVIDVEVIGQSHDYPIT---PKEHGTDFLM 125

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR       +  R  II +         FI+  +PIL+ ++ E + +       
Sbjct: 126 DNRHLWLRSRKQMAIMQIRNAIIYATYDFFDKNGFIKFDSPILSGNAAEDSTELF----- 180

Query: 187 NQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            +  ++  P    Q  QL + +G     R F   P FR E  ++ R   EF+ +D E SF
Sbjct: 181 -ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSF 239

Query: 244 VEQDDILNTME----NVLRGVFEEFSNG------------NTVSNNFLRICYDDAI 283
           +  D  ++  E     +++GV ++  +             + +   F R+ YD+AI
Sbjct: 240 LNHDQSMDLQEAYVKALIQGVLDKAPHALEILERDVDLLKSYIEKPFKRVSYDEAI 295


>gi|308189610|ref|YP_003922541.1| lysyl-tRNA synthetase [Mycoplasma fermentans JER]
 gi|307624352|gb|ADN68657.1| lysyl-tRNA synthetase [Mycoplasma fermentans JER]
          Length = 488

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 132/286 (46%), Gaps = 32/286 (11%)

Query: 5   RTHSCGDLGVSD-----VGSFVRLSGWVHRVRPH--GGII-----FLDIRDHYGITQVVA 52
           + +  G L  S+      G F R    V +V+ +  G +I     FL ++D  G  QV  
Sbjct: 28  KAYGLGKLSTSEELNKKYGQFTREELEVKKVKKNISGRLITARGPFLVLKDRKGTIQVYF 87

Query: 53  NP--DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EE 109
           N   +    +I ++     +L + GL+M            TG++ + AQ I++L+ A + 
Sbjct: 88  NKKENPELTKIVETFDLGDILWVRGLLMKTH---------TGEMTVKAQDIQLLTKALKP 138

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPI 168
           LP    G  +  E  R+++R+LDL  +   +N  + RT+I+  +R      +++E  TP 
Sbjct: 139 LPDKFHGLTDTEE--RYRHRYLDLITNPESRNTFIMRTKIVQWIRDYFNKLDYLEAETPF 196

Query: 169 LTAS-SPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           L    S   A+ F    + +NQ   + L  A +   + L+  GF+R +++   FR+E   
Sbjct: 197 LHDYLSGAAAKPFTTHHNSLNQD--FVLRIATEIPLKKLVVGGFERVYEMGRIFRNEGYD 254

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN 272
           +   P EF  ++   ++   + ++N  E +++ + ++      V+N
Sbjct: 255 TTHNP-EFTTIEFYEAYSNVEGMMNRTETLIKELCKKIGKSKFVTN 299



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG   GIDR+VMLL    ++R+V LFP
Sbjct: 446 ALEYGMPPTGGCGIGIDRLVMLLTETDSIRDVLLFP 481


>gi|239791673|dbj|BAH72272.1| ACYPI007430 [Acyrthosiphon pisum]
          Length = 279

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  + +++   +  +  E    +      AF+ G PPH G   
Sbjct: 194 YDMFMRGEEILSGAQRIHDFDYLIERAKHHQVDIE----KIAAYIDAFRYGCPPHAGGGI 249

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R+VS+FP
Sbjct: 250 GLERVVMLYLGLDNIRKVSMFP 271



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 8/104 (7%)

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           ++ A+S  GA  F +     +GS Y L Q+PQ YKQ+ +A  FDR F I   FR ED  +
Sbjct: 1   MINAASEGGANVFTI--SYFKGSAY-LAQSPQLYKQMAIAGDFDRVFTIGAVFRAEDSNT 57

Query: 228 DRLPGEFYQLDMEMSFV----EQDDILNTM-ENVLRGVFEEFSN 266
            R   EF  LD+EM+F     E  D++ ++  N+ +G+ + + +
Sbjct: 58  YRHLTEFVGLDLEMAFKYHYHEVVDVIGSLFTNIFKGLRDNYQS 101


>gi|255932391|ref|XP_002557752.1| Pc12g09250 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582371|emb|CAP80552.1| Pc12g09250 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 624

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 122/255 (47%), Gaps = 16/255 (6%)

Query: 21  VRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWVLCIDG 75
           VR++G ++  R  G  + F DIR      QV+    SA      E  + +R   ++ I G
Sbjct: 125 VRVAGRIYTKRTSGNKLNFYDIRSEGVKVQVMCQAQSATGKPFEEQHEHLRRGDIVGIVG 184

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLR 134
                   T   N   G++ + A ++ +L+     +P   +G ++  +  RF+ R+LDL 
Sbjct: 185 F----PGRTNPKNRDDGELSIFATEVVLLTPCLHAIPSEHYGFQDKEQ--RFRQRYLDLI 238

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +   +++ + R++I++ +R      +FIE  TP++ A +    A+ F+     +  + +
Sbjct: 239 MNERSRDVLITRSKIVSYIRNYFEKRDFIEVETPMMNAIAGGATAKPFVTHHNEHDMNLF 298

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y ++L+  G +R  ++   FR+E       P EF   +   ++ +  D++ T
Sbjct: 299 -MRVAPELYLKMLVVGGLNRVMEVGRQFRNEGIDLTHNP-EFTTCEFYQAYADVYDLMET 356

Query: 253 MENVLRGVFEEFSNG 267
            E+++ G+ +  + G
Sbjct: 357 TEDLVSGLVKHVTGG 371



 Score = 44.7 bits (104), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 6/70 (8%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS----VE 582
           ++ + G+PP GG   GIDR+VM L    +++EV  FPM +   D     P T +    +E
Sbjct: 536 QSLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLTFPMMKE--DKTSAEPKTAAEVAGIE 593

Query: 583 QLRELGLRIV 592
              E G+R++
Sbjct: 594 PSPEEGIRML 603


>gi|302206884|gb|ADL11226.1| Lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|308277138|gb|ADO27037.1| Lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 518

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 117/256 (45%), Gaps = 16/256 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYG--ITQVVANPDSACFEIAKSVRSEWVLCID-GLV 77
           V ++G V  VR  G + F  +++  G  I  +++       E+     ++W   +D G +
Sbjct: 76  VAIAGRVLFVRNTGKLCFAALQEGNGEHIQAMLS-----LAEVGADALADWKAHVDLGDI 130

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRD 136
           +S     I +    G++ +  Q  ++ S +   PLPV    +  E  R ++R+ DL  R+
Sbjct: 131 VSVRGRVIASK--RGELSVMVQSWQMASKSLR-PLPV-AFADMSEDTRIRHRYTDLIMRE 186

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
               N + R +++ S+R  + +  F+E  TP+L T      AR F   S       Y L 
Sbjct: 187 EARNNALTRIKVMRSLRNFLESRGFLEVETPMLQTLHGGAAARPFETHSNALDIDLY-LR 245

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y +  +  G +R F++   FR+E   S   P EF  L+   ++   DD     ++
Sbjct: 246 IAPELYLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFSMLETYQAYGTYDDGAKLHQD 304

Query: 256 VLRGVFEEFSNGNTVS 271
           +++ + ++     TV+
Sbjct: 305 MIQYIAKDVFGSTTVT 320



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        I+    E   +  +       V++  F     A + GM
Sbjct: 427 KWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMVLDEDF---LTAMEQGM 483

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   GIDR++M L G   +RE  LFPM
Sbjct: 484 PPTSGTGMGIDRLLMALTGL-GIRETVLFPM 513


>gi|297621580|ref|YP_003709717.1| lysyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297376881|gb|ADI38711.1| lysyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 525

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 12/258 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR---SEWVLCIDGLV 77
           V +SG +   R  G   F  I+DH G  QV+ N D    E   S     S+ +  I+   
Sbjct: 67  VTVSGRLVLFRAMGKNAFAQIQDHTGRIQVMFNRDQTALEGYHSENPNDSKPIKLIEKKF 126

Query: 78  MSRSAETINANII---TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
                  I  N+     G++ + A+K+ +L     LPL         +  R++ R+LDL 
Sbjct: 127 DLGDIIGIEGNLFFTQKGELTIYAKKVTLL-CKTLLPLADKHSGLADKETRYRKRWLDLI 185

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
             + +     KR++I++ +R     ++FIE  TP+L +      AR F+          Y
Sbjct: 186 THEEVRSTFRKRSKILSMIRRFFENQDFIEVETPVLQSIYGGAEARPFVTKLNALDQEMY 245

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                    K+L++  G D+ F+I   FR+E       P EF  L+   +  + +D++ T
Sbjct: 246 MRISLEIPLKKLIVG-GMDKVFEIGRVFRNEGIDRTHNP-EFTLLEAYAAHWDYNDMMRT 303

Query: 253 MENVLRGVFEEFSNGNTV 270
           MEN++  +  E  +G T+
Sbjct: 304 MENLVEKLALEL-HGTTL 320



 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 19/32 (59%), Positives = 24/32 (75%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP GGI  GIDR+VMLL  + ++R+V  FP
Sbjct: 489 GMPPTGGIGIGIDRLVMLLTHSTSIRDVLFFP 520


>gi|260439200|ref|ZP_05793016.1| lysine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292808215|gb|EFF67420.1| lysine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 681

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 129/284 (45%), Gaps = 32/284 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +I+D  G  QV  + D    +     +   +  I G+    
Sbjct: 97  VTIAGRMMFKRVMGKASFCNIQDLKGNIQVYVSKDGVGEDSYADFKKSDIGDIFGI---- 152

Query: 81  SAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
             +      +TG+I + A +I +LS + + LP    G  +     R++ R++DL  ++  
Sbjct: 153 --KGFAFRTMTGEISIHASEIVLLSKSLQILPEKYHGLTD--TDARYRQRYVDLIMNSEV 208

Query: 140 KNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ-- 196
           K+  +KR+ II  +R  +   +F+E  TP+L A +P GA      +R  +  + AL +  
Sbjct: 209 KDTFIKRSMIIKEIRNFLAGRDFMEVETPMLVA-NPGGA-----AARPFETHYNALNEDV 262

Query: 197 ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
               + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++  
Sbjct: 263 KLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYNGMMEL 321

Query: 253 MENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
            E++ R + E+       + N         F RI   D +++Y 
Sbjct: 322 TESMFRYLAEKVCGSTKFTYNGIEIDFGKPFERITMTDCVKKYA 365



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 28/41 (68%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++ 
Sbjct: 491 ALEIGMPPTGGIGYGIDRLVMLLTDSPAIRDVLLFPTMKSL 531


>gi|195124475|ref|XP_002006718.1| GI21220 [Drosophila mojavensis]
 gi|193911786|gb|EDW10653.1| GI21220 [Drosophila mojavensis]
          Length = 460

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 120/294 (40%), Gaps = 56/294 (19%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G +  G  +++ GW+  VR     IFLDI D  G T       S  F++      E    
Sbjct: 19  GANKAGDTLQVQGWIKNVRRLKNNIFLDIND--GST-------SDKFQLVVPRTLETQKL 69

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGEREY-PESIRFKY 128
             G V+S       A    G  EL A+ ++  S+AE   +   P   ++++ PE +R ++
Sbjct: 70  TAGSVVSAVGRVQVAP--NGHYELHAENVQ--SIAEGHLQDGYPFSPKQQHAPEYVR-EH 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R D +   +  R +   ++   M   NF++ +TPILT +  EGA +         
Sbjct: 125 LHLRSRIDYIAAQMRVRHKAQKAIHDYMDELNFVQINTPILTTNDCEGAGEV-------- 176

Query: 189 GSFYALPQAPQQYKQL---------------------------LMASGFDRYFQIAPCFR 221
             F   P++ Q  KQ+                            M+ G    +  AP FR
Sbjct: 177 --FRVQPESAQLLKQMSRPNVPVEESYFDQKAFLSVSGQLHLEAMSYGLGNTYTFAPAFR 234

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNF 274
            E+ +S     EFY  + E+ ++EQ D++   +E  L+ + +   N +    +F
Sbjct: 235 AENSKSPLHLAEFYMFEAELVYMEQLDELAAFIECTLKEITKRLLNSSASDLHF 288


>gi|15902670|ref|NP_358220.1| lysyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116517090|ref|YP_816116.1| lysyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|148985286|ref|ZP_01818509.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|149005821|ref|ZP_01829560.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|168482937|ref|ZP_02707889.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|168486793|ref|ZP_02711301.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|194397421|ref|YP_002037362.1| lysyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|225858528|ref|YP_002740038.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|307126899|ref|YP_003878930.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|39932186|sp|Q8CWS5|SYK_STRR6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|122278998|sp|Q04LI2|SYK_STRP2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710930|sp|B5E317|SYK_STRP4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|15458210|gb|AAK99430.1| Lysyl-tRNA synthetase (lysine--tRNA ligase) (LYSRS) [Streptococcus
           pneumoniae R6]
 gi|116077666|gb|ABJ55386.1| lysyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|147762761|gb|EDK69721.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147922484|gb|EDK73603.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|172043813|gb|EDT51859.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|183570273|gb|EDT90801.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|194357088|gb|ACF55536.1| lysyl-tRNA synthetase (classII) [Streptococcus pneumoniae G54]
 gi|225721906|gb|ACO17760.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|301799737|emb|CBW32303.1| lysyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
 gi|301801566|emb|CBW34262.1| lysyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|306483961|gb|ADM90830.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|332077129|gb|EGI87591.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
 gi|332202581|gb|EGJ16650.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
 gi|332203870|gb|EGJ17937.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 496

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 152/366 (41%), Gaps = 50/366 (13%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D      ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLRGVFEEFS-------NGNTVSNN--FLRICYDDAIRR-YGTD-------- 289
           DI++  E +++   +           G  +  N  F R+   DAIR   G D        
Sbjct: 283 DIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFKRVHMVDAIREITGVDFWQDMTLE 342

Query: 290 -----KPDLRNPIIMHNVTE--HFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGN 337
                  + + P+  H  TE  H +++ F  F +   + P    G+ V   P AK    +
Sbjct: 343 EAKAIAAEKKVPVEKH-YTEVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPED 401

Query: 338 RAFCDR 343
           + F DR
Sbjct: 402 QRFTDR 407



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|332284054|ref|YP_004415965.1| lysyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330428007|gb|AEC19341.1| lysyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 506

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 117/249 (46%), Gaps = 13/249 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            +++VG  V+++G +   R  G   F  ++D  G  Q+  + ++   ++    ++ W + 
Sbjct: 58  ALAEVGKQVKVAGRMMLKRVMGKASFATLQDSSGRIQIFLDKNTVGEDLYTQFKT-WDI- 115

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G +++        N   G++ + A  + +L+ +   PLP          +R++ R++D
Sbjct: 116 --GDIVAVEGAMFKTN--KGELSVHAATVRLLTKSLR-PLPDKFHGVADTELRYRQRYVD 170

Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQG 189
           L   +   +  + R++ I S+R  MI   F+E  TP+L    P GA  + F+        
Sbjct: 171 LIMTEETRRCFLARSKAIGSIRHHMINAGFLEVETPMLH-PIPGGAAAKPFVTHHNALDM 229

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             + L  AP+ Y + L+  GFDR F++   FR+E   S R   EF  ++   ++ +   +
Sbjct: 230 EMF-LRIAPELYLKRLVVGGFDRVFEVNRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWL 287

Query: 250 LNTMENVLR 258
           ++  E ++R
Sbjct: 288 MDFTETLIR 296



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 464 RALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVILFP 500


>gi|148989077|ref|ZP_01820477.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|221231516|ref|YP_002510668.1| lysyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225854225|ref|YP_002735737.1| lysyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|147925574|gb|EDK76651.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|220673976|emb|CAR68486.1| lysyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225722991|gb|ACO18844.1| lysyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 496

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 152/366 (41%), Gaps = 50/366 (13%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D      ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLRGVFEEFS-------NGNTVSNN--FLRICYDDAIRR-YGTD-------- 289
           DI++  E +++   +           G  +  N  F R+   DAIR   G D        
Sbjct: 283 DIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFKRVHMVDAIREITGVDFWQDMTLE 342

Query: 290 -----KPDLRNPIIMHNVTE--HFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGN 337
                  + + P+  H  TE  H +++ F  F +   + P    G+ V   P AK    +
Sbjct: 343 EAKAIAAEKKVPVEKH-YTEVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPED 401

Query: 338 RAFCDR 343
           + F DR
Sbjct: 402 QRFTDR 407



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|149003320|ref|ZP_01828209.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|237650050|ref|ZP_04524302.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237822721|ref|ZP_04598566.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|147758503|gb|EDK65501.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 496

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 152/366 (41%), Gaps = 50/366 (13%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D      ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLRGVFEEFS-------NGNTVSNN--FLRICYDDAIRR-YGTD-------- 289
           DI++  E +++   +           G  +  N  F R+   DAIR   G D        
Sbjct: 283 DIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFKRVHMVDAIREITGVDFWQDMTLE 342

Query: 290 -----KPDLRNPIIMHNVTE--HFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGN 337
                  + + P+  H  TE  H +++ F  F +   + P    G+ V   P AK    +
Sbjct: 343 EAKTIAAEKKVPVEKH-YTEVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPED 401

Query: 338 RAFCDR 343
           + F DR
Sbjct: 402 QRFTDR 407



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|297566450|ref|YP_003685422.1| asparaginyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296850899|gb|ADH63914.1| asparaginyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 441

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 120/300 (40%), Gaps = 37/300 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKSVRSEWVLCI 73
           G  + + GWV   R  G I FL +RD  G  Q        PD   FE A  +  E  L +
Sbjct: 14  GQEILIRGWVMGRRSKGKIHFLTLRDGTGFLQATVFKGELPDEE-FEQADHLPQEAALEV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLD 132
            G V + S          G  EL  + ++++S+  +E P+     +E+       +R L 
Sbjct: 73  SGQVKADSR-------APGGYELLVRSLKVVSLPRKEYPI---TPKEHGVDFLMDHRHLY 122

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       +  R  +  ++        F+    PILT ++ EG  D L    +  G   
Sbjct: 123 LRHRRPWAVLRIRDELERAIHDFFGERGFVRMDAPILTPNAVEGTTD-LFEVDLFDGEKA 181

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A  F + +   P FR E  ++ R   EF+ ++ E++F+  ++ +  
Sbjct: 182 YLSQSGQLYAEA-GAMAFGKVYTFGPTFRAERSKTRRHLLEFWMIEPEVAFMTHEENMQL 240

Query: 253 MENVLR----GVFEEFSN------------GNTVSNNFLRICYDDAIR---RYGTDKPDL 293
            E ++      V EE                 T   N+ RI Y  A+    +   ++P+L
Sbjct: 241 QEELVAYLVGRVLEEKKRELEILERDTTVLQTTAQGNYPRIHYTQAVEMVNKIAQERPEL 300



 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 4/74 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R H  E++LQ     G+ +EV +       R F  G  PH G   G++R V  
Sbjct: 364 EIIGGSQRIHDPELLLQKIREHGLPEEVFDWYMD--LRLF--GTVPHSGFGIGLERTVRW 419

Query: 550 LLGAKNVREVSLFP 563
           + G +++RE   FP
Sbjct: 420 ICGIEHIREAIPFP 433


>gi|150397998|ref|YP_001328465.1| lysyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166230590|sp|A6UDA0|SYK_SINMW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|150029513|gb|ABR61630.1| lysyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 498

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 124/270 (45%), Gaps = 28/270 (10%)

Query: 2   HRYRTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +L          ++    V ++G V+  R  G  +F+DI D  G  QV ++
Sbjct: 36  HFHRTMTNAELAEKYQDLAPDTETQDLVTVAGRVYSSRNSG--MFMDIHDASGKIQVFSH 93

Query: 54  PDSACFE---IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
            D+   E   +   +    V+ + GLV              G++ ++AQ+I +L+ +  L
Sbjct: 94  KDTTPEEARGLLPMIDLGDVIGVTGLVRRTK---------RGELTINAQQITMLTKSL-L 143

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           P+P           R++ R+LD+  +   K    +R+RI++S+R  +  E F+E  TP+L
Sbjct: 144 PMPEKYHGLADIETRYRKRYLDIMVNEESKLRFQQRSRIVSSLRRFLEDEGFMEVETPML 203

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRS 227
                   A  F       +   Y L  AP+ Y + ++ SG  D+ F+I   FR+E   +
Sbjct: 204 QPIYGGATAEPFKTHHNTLKLDMY-LRIAPELYLKRVLVSGLTDKVFEINRNFRNEGVST 262

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
              P EF  ++   ++ + +D++  +E + 
Sbjct: 263 RHNP-EFTMMECYWAYADYEDVMGLVERMF 291



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 12/98 (12%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++  CNG+EI +           R  M E M QA +     K + E+       A   G
Sbjct: 405 RFETYCNGWEIGNAFSELNDPVEQRARMVEQMEQAHARGEKEKTLDED----FLDAMDQG 460

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR++MLL  + ++R++ LFP  ++  D
Sbjct: 461 MPPAGGLGIGVDRLIMLLTNSPSIRDIILFPARRHKSD 498


>gi|289548164|ref|YP_003473152.1| lysyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289181781|gb|ADC89025.1| lysyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 569

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 117/257 (45%), Gaps = 18/257 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SACFEIAKSVRSEWVLCIDGL 76
           V ++G +  +R  G  +F  ++D  G  Q+    D     A  E   +V    V+ + G 
Sbjct: 132 VSVAGRLISLRFMGKAVFGHLQDATGKIQIYIRKDLLGEEAFKEFEDTVDPGDVIGVKGK 191

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +   S         TG++ +  Q+  +L+ +   PLP          +R++ R+LDL  +
Sbjct: 192 LFRTS---------TGELTVEVQEYTLLAKSLH-PLPEKWHGLKDVEVRYRQRYLDLIAN 241

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYAL 194
              + I+  R+R+I  +R  + ++ F+E  TPIL   +S   A+ F+      + + Y L
Sbjct: 242 PKTREILLLRSRVITEVRRFLESKGFVEVETPILQPVASGANAKPFVTYHNYLEQNLY-L 300

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  G  + +++   FR+E   +   P EF  ++   ++ +  D++   E
Sbjct: 301 RIAPELYLKRLIVGGLLKVYELGKNFRNEGVDTTHNP-EFTMVEFYCAYWDYKDLMAFTE 359

Query: 255 NVLRGVFEEFSNGNTVS 271
            +   +  E   G T++
Sbjct: 360 ELFTHILTEVMGGLTIT 376



 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + GMPP  G   GIDR+VM+L    ++REV LFP
Sbjct: 527 KALEYGMPPTAGEGIGIDRLVMILADVDSIREVILFP 563


>gi|90417431|ref|ZP_01225355.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90330765|gb|EAS46040.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 497

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 125/265 (47%), Gaps = 24/265 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            +  +G  V ++G V  +R  G   F+ ++D  G  Q+    ++  F  AKS+    ++ 
Sbjct: 53  ALEQLGKVVSVAGRV--IRNRGA--FIVVQDSSGTIQLYVTKEARPF--AKSLDLGDIVG 106

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFL 131
           I G +            ++G+ +L  Q      + + L PLP        + +R++ R++
Sbjct: 107 ITGALH-----------LSGKGDLYVQMDNYQLLTKALRPLPDKFHGLADQEMRYRQRYV 155

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQ 188
           DL  +   +N  + R+R+++ +R  + A +++E  TP+L    P GA  R F+       
Sbjct: 156 DLIVNPDVRNTFRIRSRVVDFIRRYLNAADYLEVETPMLQVI-PGGAVARPFVTHHNALD 214

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  AP+ Y + L+  GF+R ++I   FR+E   +   P EF  L+   ++ + +D
Sbjct: 215 IDMY-MRIAPELYLKRLVVGGFERVYEINRNFRNEGLSTRHNP-EFTMLEFYQAYSDFND 272

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNN 273
           +++  E++LR +  E      V N 
Sbjct: 273 LMDLTEDMLRKMTTEVLGSTKVVNT 297



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EIA+G    + SE     F      K+  ++    F   Y RA + GMPP 
Sbjct: 406 RFEFFVGGREIANGFSELNDSEDQESRFKQQVAEKDAGDDEAMHFDADYIRALEYGMPPT 465

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 466 AGEGIGIDRLVMLLTDSPSIRDVLLFP 492


>gi|78780096|ref|YP_398208.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|123755041|sp|Q318C3|SYK_PROM9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78713595|gb|ABB50772.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 512

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 27/254 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQV----------VANPDSACFEIAKSVRS--E 68
           V L+G V   R  G I F  I D  G  Q+          + N     FE  K +    +
Sbjct: 53  VSLAGRVMAKRVMGKIAFFTISDQEGQIQLYLDKRMINCNLENQKLLSFEDIKEIVDIGD 112

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
           W+  + G +   +          G++ +  +K E+LS + + PLP           R++ 
Sbjct: 113 WI-GVYGTIKKTNK---------GELSIKVEKWEMLSKSLQ-PLPDKWHGLTDIEKRYRQ 161

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186
           R+LDL  +   KN+ K R + I+ +R  +   NF+E  TPIL + +    AR F+     
Sbjct: 162 RYLDLIVNPHSKNVFKTRAKCISFIRQWLDNRNFLEIETPILQSEAGGAEARPFITHHNT 221

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  A + + + ++  GF++ +++   FR+E   +   P EF  +++  +F   
Sbjct: 222 LDIPLY-LRIATELHLKRMVVGGFEKVYELGRIFRNEGISTKHNP-EFTSVEIYQAFSNY 279

Query: 247 DDILNTMENVLRGV 260
            D++N  E +++ +
Sbjct: 280 VDMMNLTEELIKDI 293



 Score = 46.2 bits (108), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR++ML+  + ++R+V  FP+
Sbjct: 457 ALEIGMPPTGGLGIGIDRLIMLITNSPSIRDVIPFPL 493


>gi|225860691|ref|YP_002742200.1| lysyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229273|ref|ZP_06962954.1| lysyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254528|ref|ZP_06978114.1| lysyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502499|ref|YP_003724439.1| lysyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|225727166|gb|ACO23017.1| lysyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238094|gb|ADI69225.1| lysyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|327390248|gb|EGE88590.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 496

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 152/366 (41%), Gaps = 50/366 (13%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D      ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDKNETATIAGRLITKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLRGVFEEFS-------NGNTVSNN--FLRICYDDAIRR-YGTD-------- 289
           DI++  E +++   +           G  +  N  F R+   DAIR   G D        
Sbjct: 283 DIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINELFKRVHMVDAIREITGVDFWQDMTLE 342

Query: 290 -----KPDLRNPIIMHNVTE--HFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGN 337
                  + + P+  H  TE  H +++ F  F +   + P    G+ V   P AK    +
Sbjct: 343 EAKAIAAEKKVPVEKH-YTEVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPED 401

Query: 338 RAFCDR 343
           + F DR
Sbjct: 402 QRFTDR 407



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|306836901|ref|ZP_07469855.1| lysine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567206|gb|EFM42817.1| lysine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 525

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 16/247 (6%)

Query: 30  VRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMSRSAETINAN 88
           +R  G + F  ++D  G TQ+ A    A  ++ K     W   +D G  +S S   + + 
Sbjct: 88  MRNTGKLCFATLQDGDG-TQMQAMLSQA--KVGKERLDAWKSDVDLGDFISVSGHVVASR 144

Query: 89  IITGQIELSAQKIEILSVAEEL-PLPV-FGEREYPESIRFKYRFLDLR-RDTLHKNIVKR 145
               + ELS    E    A+ L PLPV F +    E  R + R+ DL  R+   KN + R
Sbjct: 145 ----RGELSIMAEEWTMAAKSLRPLPVSFAD--MAEDTRVRQRYNDLIIREEARKNAMVR 198

Query: 146 TRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
            +++ ++R  + +++F+E  TP+L T      AR F+  S       Y L  AP+ Y + 
Sbjct: 199 VKVMRALRNYLESQDFVEIETPMLQTLHGGAAARPFITHSNALDIDLY-LRIAPELYLKR 257

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
            +  G DR F+I   FR+E       P EF  L+   ++ + +D        ++ V  E 
Sbjct: 258 AVVGGIDRVFEINRNFRNEGVDRSHSP-EFAMLETYAAWGDYNDCARMTRESIQSVAREV 316

Query: 265 SNGNTVS 271
               TV+
Sbjct: 317 FGSTTVT 323



 Score = 42.0 bits (97), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSN-----VGISKE--VVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        V  + F +      G  +E  V++  F     A + GM
Sbjct: 433 KWDLYVRGFELATGYSELVDPVVQRERFEDQARLAAGGDEEAMVLDEDF---LAAMEQGM 489

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   G+DR++M L G   +RE  LFP+
Sbjct: 490 PPTAGTGMGMDRLLMALTGL-GIRETVLFPL 519


>gi|124006561|ref|ZP_01691394.1| asparaginyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123987974|gb|EAY27654.1| asparaginyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 490

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 105/268 (39%), Gaps = 31/268 (11%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69
           L  ++    V + GWV   R    + F+ + D   I   Q+V N  +    +   +    
Sbjct: 17  LASTEYDREVTVRGWVRHRRGSKEVFFVHLNDGSTIQNIQIVVNASNLDSNVLNQITVGA 76

Query: 70  VLCIDG-LVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
            L ++G LV S+ A         GQ  E+ A  + IL  A+    P+  ++   E +R +
Sbjct: 77  CLQVNGNLVASQGA---------GQSCEVQASDVVILGAADPEKYPIQPKKHSMEFLR-E 126

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV----- 182
              L +R +T       R     ++        F     PI+T S  EGA +        
Sbjct: 127 NAHLRMRTNTFSAVFRLRHAAAYAIHQYFNERGFFYLHAPIITGSDAEGAGEMFQVTTLP 186

Query: 183 ---PSRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRL 230
              P +  +G       F+  P       QL   L A G    +   P FR E+  + R 
Sbjct: 187 LDNPPKNEEGKIDFKEDFFGQPTNLSVSGQLQGELAAMGLGLIYTFGPTFRAENSNTTRH 246

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLR 258
             EF+ ++ EM+F EQ+D  N  E+ L+
Sbjct: 247 LAEFWMIEPEMAFYEQEDNHNLAEDFLK 274


>gi|300728330|ref|ZP_07061695.1| asparagine--tRNA ligase [Prevotella bryantii B14]
 gi|299774395|gb|EFI71022.1| asparagine--tRNA ligase [Prevotella bryantii B14]
          Length = 337

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 119/275 (43%), Gaps = 34/275 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  +D G+ + + GWV   R    + F+ + D   I   Q+V +P +   +  
Sbjct: 3   RTKVVDALQSTDFGNEILVKGWVRSHRSSKAVDFIALNDGSTIKNIQIVVDPSTIEADKL 62

Query: 63  KSVRSEWVLCIDG-LVMSRSAETINANIITGQI-ELSAQKIEILSVA-EELPLPVFGER- 118
           KS+ +   + + G LV S+ A         GQ  E+ +++IEI  +   + P+   G+  
Sbjct: 63  KSITTGACIGVVGTLVESQGA---------GQTSEVQSKEIEIYGLCPNDYPMQKKGQSF 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           EY      +Y  + LR +T    +  R  +  ++        F    TP++TAS  EGA 
Sbjct: 114 EYMR----QYAHMRLRTNTFGAVMRIRHNMAIAVHKYFHEHGFYYFHTPLITASDAEGAG 169

Query: 179 DFLVPSRVN------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDE 223
           +    + ++               F+          QL   L A+     +   P FR E
Sbjct: 170 EMFQVTTLDLDRVAKEGKVEYSKDFFGKKTNLTVSGQLEGELGATALGAIYTFGPTFRAE 229

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +  + R   EF+ ++ E++F+++D++++  E+ ++
Sbjct: 230 NSNTPRHLAEFWMIEPEVAFMDKDELMDLEEDFIK 264


>gi|322695320|gb|EFY87130.1| aspartyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 553

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 3/118 (2%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           R  +    R  + +  F E   P L  ++ EG  +    +   + +F A  Q+PQ YKQ 
Sbjct: 245 RIEVKRLFRSYLESRGFKEFEPPCLIGAASEGGGNVFRLAYFGEEAFLA--QSPQFYKQF 302

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVF 261
            +A G +R F I P FR E+  + R   EF  LD+EM   +   ++L+ +E VL  +F
Sbjct: 303 EIAGGRERVFSIGPVFRAENSNTPRHMTEFTGLDLEMEIKDSYTEVLSILEGVLLSIF 360


>gi|296413547|ref|XP_002836472.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630296|emb|CAZ80663.1| unnamed protein product [Tuber melanosporum]
          Length = 618

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 114/242 (47%), Gaps = 10/242 (4%)

Query: 21  VRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           VR++G +H +R  G  + F D+R      QVVA    A  +            I G+V  
Sbjct: 132 VRVAGRIHGIRSAGSRLRFYDLRAEGVKIQVVAQGQEAVGDYQAQHEYLHRGDIIGIVGF 191

Query: 80  RSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                       G+  + A+++ +LS     LP   FG ++  +  R++ R+LDL  +  
Sbjct: 192 PGRTNPKKADNPGEFSIFAKEVVLLSPCLHMLPTEHFGLKD--QETRYRQRYLDLIMNNS 249

Query: 139 HKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYALP 195
            ++I V R++I++ +R       F+E  TP++ A +    A+ F+   + +N   F  + 
Sbjct: 250 TRDIFVTRSKIVSYVRRYFDERAFVEVETPMMNAIAGGATAKPFITHHNDLNMDLFMRV- 308

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y ++L+  G +R ++I   FR+E       P EF   +   ++ + +D+L+  E 
Sbjct: 309 -APELYLKMLVVGGLERVYEIGRQFRNEGIDLTHNP-EFTTCEFYWAYADVNDLLDITEE 366

Query: 256 VL 257
           ++
Sbjct: 367 LV 368


>gi|2664210|emb|CAA10904.1| asparaginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 566

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 110/273 (40%), Gaps = 46/273 (16%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRS 67
            D G+S VG  + + GWV  +R    + F++I D   ++  Q V   D+  ++  +S   
Sbjct: 100 ADEGLSRVGQSLNIMGWVRTLRSQSSVTFIEINDGSCLSNLQCVMTSDAEGYDQVES--- 156

Query: 68  EWVLCIDGLVMSRSAETINANIITGQ-----IELSAQKIEILSVAEELPLPVFGEREYPE 122
                  G +++ ++ ++   I+  Q     +EL  +KI ++   +    P+  +R   E
Sbjct: 157 -------GSILTGASVSVQGTIVASQGTKQKVELKVEKIIVVGECDS-SYPIQKKRVSRE 208

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD--- 179
            +R K   L  R +T       R  +  +         F+  ++PI+TAS  EGA +   
Sbjct: 209 FLRTKAH-LRPRTNTFGAVARVRNTLAYATHKFFQESGFVWVASPIITASDCEGAGEQFC 267

Query: 180 --FLVPS--RVNQGSFYALPQA--------------------PQQYKQLLMASGFDRYFQ 215
              L+PS       S  A+P+                       Q      A+     + 
Sbjct: 268 VTTLIPSSHEYTDTSIDAIPKTKGGLIDWSQDFFGKPAFLTVSGQLNGETYATALSDVYT 327

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             P FR E+  + R   EF+ ++ E++F + DD
Sbjct: 328 FGPTFRAENSNTSRHLAEFWMIEPELAFADLDD 360


>gi|169832789|ref|YP_001694171.1| lysyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|225856392|ref|YP_002737903.1| lysyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|238688279|sp|B1IAN6|SYK_STRPI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|168995291|gb|ACA35903.1| lysyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|225725099|gb|ACO20951.1| lysyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 496

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 152/366 (41%), Gaps = 50/366 (13%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D      ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLRGVFEEFS-------NGNTVSNN--FLRICYDDAIRR-YGTD-------- 289
           DI++  E +++   +           G  +  N  F R+   DAIR   G D        
Sbjct: 283 DIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFKRVHMVDAIREITGVDFWQDMTLK 342

Query: 290 -----KPDLRNPIIMHNVTE--HFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGN 337
                  + + P+  H  TE  H +++ F  F +   + P    G+ V   P AK    +
Sbjct: 343 EAKAIAAEKKVPVEKH-YTEVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPED 401

Query: 338 RAFCDR 343
           + F DR
Sbjct: 402 QRFTDR 407



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|149010667|ref|ZP_01832038.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|303255869|ref|ZP_07341910.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303259976|ref|ZP_07345950.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303261382|ref|ZP_07347330.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303264049|ref|ZP_07349970.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303266941|ref|ZP_07352817.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269235|ref|ZP_07355011.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|147765148|gb|EDK72077.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|302597253|gb|EFL64358.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302637516|gb|EFL68003.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302638895|gb|EFL69356.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302641242|gb|EFL71613.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643515|gb|EFL73786.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302646454|gb|EFL76680.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 496

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 152/366 (41%), Gaps = 50/366 (13%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D      ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLRGVFEEFS-------NGNTVSNN--FLRICYDDAIRR-YGTD-------- 289
           DI++  E +++   +           G  +  N  F R+   DAIR   G D        
Sbjct: 283 DIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINKPFKRVHMVDAIREITGVDFWQDMTLE 342

Query: 290 -----KPDLRNPIIMHNVTE--HFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGN 337
                  + + P+  H  TE  H +++ F  F +   + P    G+ V   P AK    +
Sbjct: 343 EAKAIAAEKKVPVEKH-YTEVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPED 401

Query: 338 RAFCDR 343
           + F DR
Sbjct: 402 QRFTDR 407



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|111656835|ref|ZP_01407683.1| hypothetical protein SpneT_02001903 [Streptococcus pneumoniae
           TIGR4]
 gi|149020353|ref|ZP_01835245.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168492226|ref|ZP_02716369.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|168492864|ref|ZP_02717007.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|39932232|sp|Q97RS9|SYK_STRPN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|147930655|gb|EDK81637.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|183573509|gb|EDT94037.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183576861|gb|EDT97389.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|332075995|gb|EGI86461.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 496

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 152/366 (41%), Gaps = 50/366 (13%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D      ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDKNETATIAGRLITKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLRGVFEEFS-------NGNTVSNN--FLRICYDDAIRR-YGTD-------- 289
           DI++  E +++   +           G  +  N  F R+   DAIR   G D        
Sbjct: 283 DIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFKRVHMVDAIREITGVDFWQDMTLE 342

Query: 290 -----KPDLRNPIIMHNVTE--HFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGN 337
                  + + P+  H  TE  H +++ F  F +   + P    G+ V   P AK    +
Sbjct: 343 EAKAIAAEKKVPVEKH-YTEVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPED 401

Query: 338 RAFCDR 343
           + F DR
Sbjct: 402 QRFTDR 407



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|266624958|ref|ZP_06117893.1| lysine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288863147|gb|EFC95445.1| lysine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 597

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 131/289 (45%), Gaps = 38/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F +++D  G  Q     DS   E  K  +   +  I G+ 
Sbjct: 60  GKEVSVAGRMMSKRVMGKASFCNVQDLKGNIQTYVARDSIGEESYKDFKKLDIGDIVGI- 118

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR--- 134
              +A T      TG+I + A  + +L+ + ++ LP          +R++ R++DL    
Sbjct: 119 -KGTAFTTK----TGEISIHATSVVLLTKSLQI-LPEKFHGLTNTDLRYRQRYVDLVMNP 172

Query: 135 --RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             RDT     VKR++II ++R  +  + F+E  TP+L A++   A      +R  +  + 
Sbjct: 173 EVRDTF----VKRSQIIKAIRDHLDDQGFMEVETPMLVANAGGAA------ARPFETHYN 222

Query: 193 ALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           AL +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + 
Sbjct: 223 ALDEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDY 281

Query: 247 DDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286
             +++ +E++ R V  +      V         S  F RI   DA+++Y
Sbjct: 282 HGMMDLVEDLFRSVALKVLGTAVVTYDGVEIDLSKPFERITMVDALKKY 330



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 26/41 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A   GMPP GGI  GIDR VMLL  +  +R+V LFP  ++ 
Sbjct: 457 ALMIGMPPTGGIGIGIDRFVMLLTDSYAIRDVLLFPTMKSL 497


>gi|262203856|ref|YP_003275064.1| lysyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262087203|gb|ACY23171.1| lysyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 507

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 122/268 (45%), Gaps = 22/268 (8%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTH+   +          ++ G  V ++G V  +R  G + F  +++  G TQ+ A    
Sbjct: 40  RTHTLAQIRADHPDLEAGTETGEHVGVAGRVIFLRNKGKLCFATLQEGDG-TQLQA---M 95

Query: 57  ACFE-IAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
             F  + +   + W   +D G ++  S E I++   TG++ + A++ E+ S +   PLPV
Sbjct: 96  VSFNGVGEESLARWKAEVDLGDIVFISGEVISSR--TGELSVMAERWEMASKSLR-PLPV 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
              ++  E  R + R++DL      ++I + R  +I  +R  +    F+E  TP+L T  
Sbjct: 153 -AHKDMNEETRVRQRYVDLIMRPEARSIARTRISVIAELRAALGRRGFLEVETPMLQTLH 211

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+  S       + L  AP+ + +  +  G +R F+I   FR+E   S   P 
Sbjct: 212 GGAAARPFVTHSNAFDMDLF-LRIAPELFLKRCVVGGIERVFEINRNFRNEGADSTHSP- 269

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGV 260
           EF  L+   ++   DD       +++ V
Sbjct: 270 EFAMLETYQAYGTYDDAATMTRELVQEV 297



 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL------YRAFQCGMP 534
           ++DL   GFE+A+G   + + + ++Q    V  ++         +        A + GMP
Sbjct: 416 KWDLYVRGFELATG--YSELVDPIIQRERFVDQARLAAAGDDEAMALDEEFLAAMEYGMP 473

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P  G   GIDR++M L G   +RE  LFP+
Sbjct: 474 PTAGTGMGIDRLLMALTGL-GIRETILFPL 502


>gi|148997215|ref|ZP_01824869.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168575371|ref|ZP_02721307.1| lysyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307067319|ref|YP_003876285.1| Lysyl-tRNA synthetase (class II) [Streptococcus pneumoniae AP200]
 gi|147756915|gb|EDK63955.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|183578679|gb|EDT99207.1| lysyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306408856|gb|ADM84283.1| Lysyl-tRNA synthetase (class II) [Streptococcus pneumoniae AP200]
          Length = 496

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 152/366 (41%), Gaps = 50/366 (13%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D      ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLRGVFEEFS-------NGNTVSNN--FLRICYDDAIRR-YGTD-------- 289
           DI++  E +++   +           G  +  N  F R+   DAIR   G D        
Sbjct: 283 DIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFKRVHMVDAIREITGVDFWQDMTLE 342

Query: 290 -----KPDLRNPIIMHNVTE--HFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGN 337
                  + + P+  H  TE  H +++ F  F +   + P    G+ V   P AK    +
Sbjct: 343 EAKVIAAEKKVPVEKH-YTEVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPED 401

Query: 338 RAFCDR 343
           + F DR
Sbjct: 402 QRFTDR 407



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|58336620|ref|YP_193205.1| lysyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|58253937|gb|AAV42174.1| lys-tRNA synthetase lysrs [Lactobacillus acidophilus NCFM]
          Length = 516

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 23/248 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F DI D  G  Q+    D      ++I K       L I+G V
Sbjct: 61  TKVAGRMLAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYKIFKKSDIGDFLGIEGEV 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--R 134
           M            TG++ + A  +  LS A   LP    G ++  E+I ++ R+LDL   
Sbjct: 121 MKTD---------TGELTIRALHVTFLSKALRPLPDKYHGLKDV-EAI-YRQRYLDLITN 169

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
           RD+  +  V RT+II ++R  +  ++F+E  TP+L  + P G  AR F+          Y
Sbjct: 170 RDSYMR-FVHRTQIIQAIRDYLNKQDFMEVETPVL-HNIPGGAEARPFITHHNALDIDLY 227

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                    K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++ 
Sbjct: 228 MRIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELETYAAYWDFHDVMDE 285

Query: 253 MENVLRGV 260
            E ++R  
Sbjct: 286 AEGIIRAA 293



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 454 RAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 490


>gi|120406308|ref|YP_956137.1| lysyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119959126|gb|ABM16131.1| lysyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 509

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 22/271 (8%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD 55
           RTH+  +L          +  G  V ++G V   R  G + F  +++  G   Q + + D
Sbjct: 46  RTHTLAELRAAYPDLPADTKTGQEVGVAGRVIFARNSGKLCFATLQEGDGTHLQAMISLD 105

Query: 56  SACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
               ++ +     W   +D G ++    E I++    G++ + A   +I S A   PLPV
Sbjct: 106 ----QVGQDSLDAWKADVDLGDIVFVHGEVISSR--RGELSVLADSWQIASKALR-PLPV 158

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
              +E  E  R + R++DL      + I + R  ++ ++R  +    F+E  TP+L T +
Sbjct: 159 -AHKEMSEESRVRQRYVDLIVRPEARAIARQRVAVVRAVRNALERRGFLEVETPMLQTLA 217

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+  S       Y L  AP+ + +  +  GFDR F++   FR+E   S   P 
Sbjct: 218 GGAAARPFVTHSNALDADLY-LRIAPELFLKRCVVGGFDRVFELNRNFRNEGADSTHSP- 275

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           EF  L+   ++   DD       +++ V +E
Sbjct: 276 EFAMLETYQAYGTYDDSALVTRQLIQEVADE 306



 Score = 40.8 bits (94), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 14/112 (12%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
            P T P   +E +           ++DL    FE+A+G        +  + F     +  
Sbjct: 402 TPLTRPHRSIEGVTE---------KWDLYIRNFELATGYSELVDPIIQRERFEEQARAAA 452

Query: 517 VVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             ++    L      A + GMPP  G   GIDR++M L G  ++RE  LFP+
Sbjct: 453 AGDDEAMALDEDFLAALEYGMPPTTGTGMGIDRLLMALTGL-SIRETVLFPI 503


>gi|301793881|emb|CBW36276.1| lysyl-tRNA synthetase [Streptococcus pneumoniae INV104]
 gi|332204726|gb|EGJ18791.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 496

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 152/366 (41%), Gaps = 50/366 (13%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D      ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDKNETATIAGRLITKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLRGVFEEFS-------NGNTVSNN--FLRICYDDAIRR-YGTD-------- 289
           DI++  E +++   +           G  +  N  F R+   DAIR   G D        
Sbjct: 283 DIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFKRVHMVDAIREITGVDFWQDMTLE 342

Query: 290 -----KPDLRNPIIMHNVTE--HFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGN 337
                  + + P+  H  TE  H +++ F  F +   + P    G+ V   P AK    +
Sbjct: 343 EAKTIAAEKKVPVEKH-YTEVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPED 401

Query: 338 RAFCDR 343
           + F DR
Sbjct: 402 QRFTDR 407



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|154341393|ref|XP_001566648.1| lysyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134063973|emb|CAM40163.1| putative lysyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 536

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 77/148 (52%), Gaps = 5/148 (3%)

Query: 124 IRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
           I+++YRF+D+  + ++ ++  KR  I  ++R  + A +FIE  TP+L + +S   AR F+
Sbjct: 93  IKYRYRFVDMMSNPSVLQHFRKRHAITRALRDYLDARSFIEVETPVLHSVASGASARPFI 152

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                N    + L  AP+ + +  +  G +R ++I   FR+ED      P EF   +   
Sbjct: 153 THHNANGADLF-LRVAPELHLKQCVVGGMERVYEIGRVFRNEDADRSHNP-EFTTCEFYA 210

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNT 269
           ++   +D++   E ++R +    +NG T
Sbjct: 211 AYHTYEDLMVMTEEIMRHL-ALAANGTT 237



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A Q G+PP  G   GIDR+V LL G+ ++R+  LFP+
Sbjct: 402 KALQAGLPPTAGWGMGIDRVVTLLNGSASIRDGILFPL 439


>gi|113475998|ref|YP_722059.1| lysyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110167046|gb|ABG51586.1| lysyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 522

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 27/251 (10%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-------VVANPDSACFEIAKSVRSEWVL 71
            F+++ G +   R  G I F+++ D  G  Q       V  +P  +  ++ K      +L
Sbjct: 63  KFLKVCGRITSKRDSGSIGFINLTDETGKIQLKIEKKLVKGDPGLSFKQVQK------LL 116

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--VFGEREYPESIRFKYR 129
            +   V   SAE I      G++ +   K+++LS A  +P P   +G  + PE  R ++R
Sbjct: 117 DVGDFV---SAEGIGCRTNRGELSIQVNKLDVLSKAI-IPFPDSYYGVND-PEICR-RHR 170

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
            +DL    + L +  V R++I+ S+R  +   NF E  TPIL +      AR F+     
Sbjct: 171 EMDLAGNAEALQRFRV-RSKIMQSIRTYLWDANFYEIETPILQSIYGGAAARPFVTHHNA 229

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  A + + +  +  GF+R F++   FR+E   S   P EF  L++  ++ + 
Sbjct: 230 LDVDLY-LRIATELFLKRAICGGFERVFELGRVFRNEGIDSTHNP-EFTSLEVYQAYADY 287

Query: 247 DDILNTMENVL 257
            +IL  +E+V+
Sbjct: 288 FEILGLVEDVI 298



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A   GMP  GG+  G+DR+VMLL   +++R+V +FP
Sbjct: 478 QALSLGMPNCGGMGIGVDRLVMLLTNTQSIRDVIMFP 514


>gi|296818309|ref|XP_002849491.1| lysyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238839944|gb|EEQ29606.1| lysyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 562

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 3/149 (2%)

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186
           R ++L       N+++ R+ I +SMR      +F+E STPIL + S    A+ F+  +  
Sbjct: 209 RHVELLSSPSASNVLRARSLITHSMRNFFAERDFMEVSTPILASKSGGAIAQPFVTSATE 268

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                 +L  AP+ + + L+  GFDR F+I P FR+E       P EF   +   +F + 
Sbjct: 269 FPERQLSLRIAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP-EFTTCEFYQAFADL 327

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           + ++ T E++L  +  E    N   NN L
Sbjct: 328 ESLIETTESLLSTLAPEIQRLNEKLNNSL 356



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 23/39 (58%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G  +  + G+PP GG   GIDR+ ML  GA+ + +V  F
Sbjct: 506 GYLQTLEWGLPPTGGWGCGIDRLCMLFTGARRISDVLAF 544


>gi|322708418|gb|EFY99995.1| hypothetical protein MAA_04924 [Metarhizium anisopliae ARSEF 23]
          Length = 558

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 116/284 (40%), Gaps = 48/284 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL---- 76
           V+L GWV  VR   G  F+DI D   +  V    D A   +A  +R    +C+ G     
Sbjct: 55  VQLCGWVRSVRKSSGARFVDITDGSSMRPVQVVVDKA---LAADIRPGSAVCLQGRWHNA 111

Query: 77  --VMSRSAETINANIITGQ---------------------IELSAQKIEILSV------- 106
             +   S E  + + I+ Q                      EL   ++++L V       
Sbjct: 112 ADMKQPSTEGSSVSDISSQHTQSVSGADGMEQGAGRPPTIQELQVDEVKVLGVSDPQWHA 171

Query: 107 --AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
             A     P+  + + PES+R+      LR  T   + + R R   +        N    
Sbjct: 172 NIASAKTYPIQNKYQTPESLRY---ISHLRSRTPLNSTLLRLRSDATFILTQFFFNQKFQ 228

Query: 165 ST--PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPC 219
            T  PI+T+S  EGA +       ++  F+  P+      QL    +A      + ++P 
Sbjct: 229 QTHPPIITSSDCEGAGEAFTVKTGSKAEFFRDPKYLTVSTQLHLEALAQSLGDVWTLSPT 288

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFE 262
           FR E   + R   EFY L+ EMSFV + +++++ ++++L+ + +
Sbjct: 289 FRAEQSDTSRHLSEFYMLEAEMSFVNDMNEVMDLVQSMLKNLAQ 332



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 21/170 (12%)

Query: 406 PLKFCSFAADARNHIAQELGIINCN-CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
           P+      ++   ++A+E+G    N  +   +I  +P      E K      +  + PQG
Sbjct: 404 PIWGSGLQSEHEKYLAKEIGFDKTNNAYLPVFITQYP-----REIKAFYMLRSASSPPQG 458

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH-MSEV---MLQAFSNVGISKEVVEN 520
             E+++  DLL         V +  E+A G +R H +SE+   M      V   ++   +
Sbjct: 459 --ETVECFDLL---------VPSLGELAGGSMREHRLSELEDNMKLHGLEVPGKRQDRSS 507

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             G      + G PPHGG   G DR++  L G  NVR+V  FP     CD
Sbjct: 508 GLGWYLDLRRWGCPPHGGFGLGFDRLLSYLTGVANVRDVVPFPRHYQRCD 557


>gi|281211769|gb|EFA85931.1| asparagine-tRNA ligase [Polysphondylium pallidum PN500]
          Length = 518

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 120/318 (37%), Gaps = 76/318 (23%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGL 76
           S ++  GWV   R    I F+++ D   +   QV+ +P                  + G+
Sbjct: 80  SSIKTRGWVKSFRAQKTIGFVELSDGSTVQGLQVIGDPAQ----------------LTGI 123

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                 E      ++G +  S  K + L +  + P  V G       ++ K+   +  R+
Sbjct: 124 TNGCCVE------VSGSLTRSPGKSQQLELKLDQPARVIGASPEDYPLQPKHHSFEFLRE 177

Query: 137 TLHKNIVKRTRIINSM-RCRMIAENFIE----------CSTPILTASSPEGARD---FLV 182
             H  I  R+  + SM R R  A N I             TPI+TAS  EG  +     V
Sbjct: 178 IAH--IRPRSNTLGSMIRVRNQASNLINQYFQERQFQLVHTPIITASDCEGGGEQFQVTV 235

Query: 183 PSRVN------------QGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           PS                  F+  P       Q +  + AS   R +   P FR E   +
Sbjct: 236 PSNQQQQQQQKQQQQQQSSHFFGEPAFLTVSGQLEAEIFASSHGRVYTFGPTFRAEKSNT 295

Query: 228 DRLPGEFYQLDMEMSFVEQDDILN--------TMENVLRGVFEEFSNGN----------- 268
            R   EF+ ++ EM+F+  +D L+        T++N+L    EE    N           
Sbjct: 296 TRHLSEFWMVEPEMAFINLNDNLSIAEDFIKYTVKNILEKCPEELEFFNKRIDTKLFERL 355

Query: 269 --TVSNNFLRICYDDAIR 284
             T++N F+R+ Y DA++
Sbjct: 356 NCTLNNEFIRLPYTDAVK 373



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G IR    E ++Q    + +     EN +       + G  PHGG   G +R +  
Sbjct: 441 ELIGGSIREERYEKLVQRIKELKMD----ENSYSWYLDLRKYGSAPHGGFGLGFERFLQY 496

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G +N+R+V   P  QN+C  
Sbjct: 497 VTGLQNIRDVIPIPRHQNYCKF 518


>gi|167757477|ref|ZP_02429604.1| hypothetical protein CLORAM_03027 [Clostridium ramosum DSM 1402]
 gi|237735040|ref|ZP_04565521.1| lysyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|167702474|gb|EDS17053.1| hypothetical protein CLORAM_03027 [Clostridium ramosum DSM 1402]
 gi|229381816|gb|EEO31907.1| lysyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 494

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 126/288 (43%), Gaps = 29/288 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77
           V+++G +   R  G + F+ I+D  G  Q+    D+     +EI K      ++ + G V
Sbjct: 60  VKVAGRIMTKRRKGKVCFMHIQDRDGQIQLYVRKDAVGEDVYEIIKKGDIGDIVGVKGTV 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
              +         TG+  +  ++   L+ A   LP    G  +  E  R++ R++DL  +
Sbjct: 120 FMTN---------TGECSIKVEEYTHLTKALRPLPEKYHGLSDVEE--RYRRRYVDLIMN 168

Query: 137 TLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
              + I   R +II S++  +  + ++E  TP+L        AR F+        +FY L
Sbjct: 169 EEARKIAFARPKIIRSIQHYLDNQGYVEVETPVLNPILGGASARPFVTHHNALDMNFY-L 227

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A +   + L+  G D  ++I   FR+E       P EF  +++  +F + + +++  E
Sbjct: 228 RIATELGLKRLIVGGMDAVYEIGRLFRNEGMDRTHNP-EFTTIEVYKAFSDLEGMMDLTE 286

Query: 255 NVLR-------GVFEEFSNGNTVS--NNFLRICYDDAIR-RYGTDKPD 292
            ++        G +E    GN +S    F RI   DAI+ + G D  D
Sbjct: 287 GIISNAANEVCGTYELEYKGNKISLAPGFKRISMTDAIKEKTGIDFAD 334



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 30/40 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG+  GIDR+VMLL G +++REV LFP  +N
Sbjct: 454 ALEYGLPPTGGMGMGIDRLVMLLTGQESIREVILFPHMKN 493


>gi|148994403|ref|ZP_01823626.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168488382|ref|ZP_02712581.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147927239|gb|EDK78273.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183572998|gb|EDT93526.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332074509|gb|EGI84985.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 496

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 152/366 (41%), Gaps = 50/366 (13%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D      ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLR---------GVFEEFSNGNTVSNNFLRICYDDAIRR-YGTD-------- 289
           DI++  E +++         G     S    ++  F R+   DAIR   G D        
Sbjct: 283 DIMDLTEGIIQHAAKSVKGDGPVNYQSTEIKINEPFKRVHMVDAIREITGVDFWQDMTLE 342

Query: 290 -----KPDLRNPIIMHNVTE--HFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGN 337
                  + + P+  H  TE  H +++ F  F +   + P    G+ V   P AK    +
Sbjct: 343 EAKAIAAEKKVPVEKH-YTEVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPED 401

Query: 338 RAFCDR 343
           + F DR
Sbjct: 402 QRFTDR 407



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|47575822|ref|NP_001001255.1| lysyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
 gi|45768826|gb|AAH67987.1| lysyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
          Length = 578

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 28/280 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP----- 54
           + +Y     GD     +   V ++G +H  R  G  +IF D+R      QV+AN      
Sbjct: 95  IQKYNNLQTGD----QLSEVVSIAGRIHAKRISGAKLIFYDLRGEGTKLQVMANSRFYKS 150

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLP 113
           +     I   +R   ++ + G                G++ +   ++ +LS     LP  
Sbjct: 151 EEEFATINNKLRRGDLIGVKG---------NPGKTKKGELSIIPHEMILLSPCLHMLPHL 201

Query: 114 VFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
            FG ++  +  R++ R+LDL   D + +  + R ++I  +R  +    F+E  TP++   
Sbjct: 202 HFGLKD--KETRYRQRYLDLILNDYVRQKFIVRAKLITYLRKFLDDLGFLEIETPMMNVI 259

Query: 173 SPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            P GA  + F+          Y +  AP+ Y ++L+  G DR ++I   FR+E       
Sbjct: 260 -PGGAVAKPFITYHNELDMKLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHN 317

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
           P EF   +  M++ +  D++   E +L G+ +  + G  V
Sbjct: 318 P-EFTTCEFYMAYADYYDLMEITEKLLSGMVKHITGGYKV 356



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 521 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 556


>gi|149176428|ref|ZP_01855042.1| lysyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148844780|gb|EDL59129.1| lysyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 493

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 131/285 (45%), Gaps = 27/285 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74
           G  VR++G +   R  G + F DI+D  G  Q++    +   A +E+  ++    ++ ID
Sbjct: 53  GEEVRIAGRIMLRRKAGKLRFYDIKDWTGKIQLLFSRGDLTEAQWELMGTLDLGDLIGID 112

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G +  R  ET       G+I +  +++ +L  +   P P          +  + R LDL 
Sbjct: 113 GCL--RRTET-------GEISVFVKELTVLCKSLAQP-PEKHHSVKDVELLLRQRSLDLI 162

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
             + + + ++KR++II+S+R  +  + F E  TP+L A +    AR F+          Y
Sbjct: 163 YTEGVLEKMLKRSQIIDSVRQTLRNQKFAEVETPVLHAVAGGAAARPFITHHNTLDIELY 222

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  A + + + LM  G +R ++I   FR+E   +   P EF  +++  ++ + + +++ 
Sbjct: 223 -MRIALELHLKRLMVGGIERVYEIGRVFRNEGIDATHNP-EFTMIEIYQAYGDYETMMDL 280

Query: 253 MENVLRGVFEEFSN--------GNTV--SNNFLRICYDDAIRRYG 287
            E ++    +  S+        G T+  S  + R  Y D +R + 
Sbjct: 281 TEAIVTDAVKTISDTMELPWGEGETIDFSGPWERKKYLDLVREHA 325



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 23/99 (23%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL------------- 525
           A +++L   G E+A+      +++ +LQ        +E+ + +  GL             
Sbjct: 394 AERFELFVKGMELANA--YTELNDPLLQ--------EELFQTQLSGLSDEDSMAKMDTDF 443

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 444 IKALKVGMPPAGGLGIGIDRLVMLLTNSHSIRDVIYFPL 482


>gi|320586573|gb|EFW99243.1| aspartyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 566

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 3/136 (2%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           R  +    R  + A  F E   P L  ++ EG  +        + +F A  Q+PQ YKQ 
Sbjct: 249 RIEVKKLFRSYLEARRFKEFEPPCLIGAASEGGANVFRLPYFGEEAFLA--QSPQFYKQF 306

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEE 263
            +A G +R F I P FR E+  + R   EF  LD+EM   +   ++++ +E VL  +F  
Sbjct: 307 EIAGGRERVFCIGPVFRAENSNTPRHMTEFTGLDVEMEIKDSYTEVISILEGVLLSIFRG 366

Query: 264 FSNGNTVSNNFLRICY 279
                 V  + +R  Y
Sbjct: 367 LQERCAVEIDTVRSVY 382


>gi|312866389|ref|ZP_07726607.1| lysine--tRNA ligase [Streptococcus downei F0415]
 gi|311098083|gb|EFQ56309.1| lysine--tRNA ligase [Streptococcus downei F0415]
          Length = 496

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 17/241 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    D      ++I K       L ++G VM 
Sbjct: 65  IAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDEVGEENYQIFKKADIGDFLGVEGQVMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDT 137
                       G++ + A  +  LS A   PLP           +++ R+LDL   RD+
Sbjct: 125 TD---------MGELSIKATHLTHLSKALR-PLPEKFHGLTDVETKYRKRYLDLITNRDS 174

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
             +  V R++II+ +R  +    F+E  TP+L   +   A    V     Q     L  A
Sbjct: 175 FDR-FVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFVTHHNAQDMDMVLRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ + +DI++  E ++
Sbjct: 234 TELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFNDIMDLTEGII 292

Query: 258 R 258
           +
Sbjct: 293 Q 293



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L+ F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+V 
Sbjct: 431 LERFKAQAAAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|6319872|ref|NP_009953.1| Slm5p [Saccharomyces cerevisiae S288c]
 gi|135160|sp|P25345|SYNM_YEAST RecName: Full=Asparaginyl-tRNA synthetase, mitochondrial; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS; Flags:
           Precursor
 gi|1907168|emb|CAA42316.1| asn-tRNA synthetase, mitochondrial [Saccharomyces cerevisiae]
 gi|151943844|gb|EDN62144.1| conserved protein [Saccharomyces cerevisiae YJM789]
 gi|190406459|gb|EDV09726.1| asparaginyl-tRNA synthetase, mitochondrial precursor [Saccharomyces
           cerevisiae RM11-1a]
 gi|256269678|gb|EEU04950.1| Slm5p [Saccharomyces cerevisiae JAY291]
 gi|285810718|tpg|DAA07502.1| TPA: Slm5p [Saccharomyces cerevisiae S288c]
 gi|323338576|gb|EGA79795.1| Slm5p [Saccharomyces cerevisiae Vin13]
 gi|323356011|gb|EGA87818.1| Slm5p [Saccharomyces cerevisiae VL3]
          Length = 492

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 119/257 (46%), Gaps = 24/257 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQV-----VANPDSACFEIAKSVRSEWVLCIDG 75
           + ++GW+  +R    I FLD++D   +  +     + N D   F   K +++   L I  
Sbjct: 34  ISINGWIKSIRLLKRIAFLDLQDGTSVNPLRIVIPLTNTDEVQF--LKILKTGQTLSISN 91

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLR 134
                +           QI+   + I+++  V+E  PL    +++Y +++R+      L+
Sbjct: 92  ATWQSTPN--RKQPFELQIKNPVKSIKLVGPVSENYPL----QKKY-QTLRYLRSLPTLK 144

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARD-FLVPSRVN--QG 189
             T + + + R R     +  +  +  +F + S PILT++  EGA + F V +  +    
Sbjct: 145 YRTAYLSAILRLRSFVEFQFMLYFQKNHFTKVSPPILTSNDCEGAGELFQVSTNTSPTAS 204

Query: 190 SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           S++  P       QL   ++A    R + ++PCFR E   + R   EF+ L++EM FV  
Sbjct: 205 SYFGKPTYLTVSTQLHLEILALSLSRCWTLSPCFRAEKSDTPRHLSEFWMLEVEMCFVNS 264

Query: 247 -DDILNTMENVLRGVFE 262
            +++ + +E  ++ + +
Sbjct: 265 VNELTSFVETTIKHIIK 281


>gi|302331589|gb|ADL21783.1| lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 1083

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 31/267 (11%)

Query: 5   RTHSCGDLGVSDVGSFVR-----LSGWVHRVRPHGGIIFLD-IRDHYGITQVVANPDSAC 58
           RT S  +L  +D    V      ++G V  +R HGG++F D + +H  +  V+       
Sbjct: 626 RTTSIKELLAADATHTVSEAPISVTGRVAFIRDHGGVVFADLVEEHTKLQLVIERSAGQT 685

Query: 59  FEIAKSV--RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             + K +  R + +     L  SR+      ++I    +++A+ +         P+P   
Sbjct: 686 MTLFKHLVSRGDLISATGQLGESRNG---TRSLIVSSWDMAAKSLT--------PMP--- 731

Query: 117 EREYPES---IRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TA 171
               P S   +R K+R +D   +    +I + R++ ++++R  +  + ++E  TPIL T 
Sbjct: 732 --RVPLSNPHLRAKFRHMDFALNKKATDIFLARSKAVSAVRSVLQEQGYMEAETPILQTI 789

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                AR F    R    +   L  AP+ Y + L+  G  R F+I   FR+E   S   P
Sbjct: 790 HGGANARPFRTHIRAYDQNL-TLRIAPELYLKRLVVGGIPRVFEIGRNFRNEGVDSTHNP 848

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLR 258
            EF  L+   S+   D +    E ++R
Sbjct: 849 -EFTSLEAYQSYGNWDTMRVLTEELIR 874



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 13/100 (13%)

Query: 479  AFQYDLVCNGFEIASGGIR--------NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +              +S+  L+A      + E+ EN      +A Q
Sbjct: 983  AQRWDLVACGMELGTAYTELADPLEQYARLSDQSLRAAGGDAEAMELDEN----FLKALQ 1038

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             GMPP GG+  GIDR+VM L G +N+REV  FP  +   D
Sbjct: 1039 FGMPPTGGLGIGIDRLVMFLTG-QNIREVLSFPFVRPDTD 1077


>gi|296089683|emb|CBI39502.3| unnamed protein product [Vitis vinifera]
          Length = 1537

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 4/151 (2%)

Query: 122  ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
            +  R++ R+LDL  +   + I K R +II+ +R  +   +F+E  TP++        AR 
Sbjct: 1169 QETRYRQRYLDLMLNMEVRQIFKTRAKIISYIRSFLDNLDFLEVETPMMNMIPGGAAARP 1228

Query: 180  FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
            F+          Y +  AP+ Y + L+  G DR ++I   FR+E       P EF   + 
Sbjct: 1229 FVTHHNDLNMKLY-MRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTTCEF 1286

Query: 240  EMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
             M+F + +D++   E +L G+ +E + G  +
Sbjct: 1287 YMAFADYNDVMELTEKMLSGMVKELTGGYKI 1317



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + G+PP GG   GIDR+ M+L  ++N++EV LFP
Sbjct: 1480 ALEYGLPPTGGWGLGIDRLTMMLTDSQNIKEVLLFP 1515


>gi|321309599|ref|YP_004191928.1| asparaginyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801443|emb|CBY92089.1| asparaginyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 443

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 113/283 (39%), Gaps = 45/283 (15%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSE 68
           L  S++    R+ GWV   + HG  ++F+ + D            S C   +I      +
Sbjct: 7   LKNSELNQKTRIEGWVKSFQVHGKDLVFISLND-----------GSTCKDLQIVCKTGID 55

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             L   G  +S S     +      +E  A  +EILS A++         ++P  I+ K 
Sbjct: 56  TSLLTVGSAISASGFLQKSPKGGQDLEFVADGVEILSSADQ---------KFP--IQKKE 104

Query: 129 RFLDLRRDTLHKNIVKRT-RIINSMRCRM--------IAENFIECSTPILTASSPEGARD 179
              +  R+  H+    R  RI+N+++  +         +  F     PILT+++ EG  +
Sbjct: 105 HGFEFLREVSHQRARTRLFRIVNAIKNEVNYSIHEFFYSHGFTWIQAPILTSNNCEGGSE 164

Query: 180 -FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F + +  N      L     Q+    MA G    +   P FR E   + +   EF+ ++
Sbjct: 165 VFEIKNSENSFKKTTLLSVSGQFHAEAMALGLKDVYTFGPTFRAEKSNTSQHLSEFWMIE 224

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
            E SF   D  +N ME+ L+           V N  LR C+++
Sbjct: 225 PECSFSNLDGNINLMEDFLK----------FVVNRVLRNCHEE 257


>gi|297795301|ref|XP_002865535.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311370|gb|EFH41794.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 320

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 6/165 (3%)

Query: 101 IEILSVAEELPLPVFGEREYPE---SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157
           ++  S  EE      GER  P      R   R LDLR          R+ I N  R  ++
Sbjct: 116 VDAASQKEEDEQDASGERRTPHVSLDTRLNNRVLDLRTPANQAIFRVRSHIENFFRQYLL 175

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
           A  F    TP L A    G         +  G   +L Q+ Q +KQ+ ++SGF + F I 
Sbjct: 176 ALEFDSIHTPKLLARKINGGASVFCLDYI--GKDASLAQSAQLHKQMAISSGFTKVFDIG 233

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVF 261
             FR E   ++R   EF  L++EM      +++++ ++ +   +F
Sbjct: 234 TYFRSERSSTNRHLTEFVTLNVEMELKYHYNEVMDLVDGLFADIF 278


>gi|207347314|gb|EDZ73526.1| YCR024Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 492

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 119/257 (46%), Gaps = 24/257 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQV-----VANPDSACFEIAKSVRSEWVLCIDG 75
           + ++GW+  +R    I FLD++D   +  +     + N D   F   K +++   L I  
Sbjct: 34  ISINGWIKSIRLLKRIAFLDLQDGTSVNPLRIVIPLTNTDEVQF--LKILKTGQTLSISN 91

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLR 134
                +           QI+   + I+++  V+E  PL    +++Y +++R+      L+
Sbjct: 92  ATWQSTPN--RKQPFELQIKNPVKSIKLVGPVSENYPL----QKKY-QTLRYLRSLPTLK 144

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARD-FLVPSRVN--QG 189
             T + + + R R     +  +  +  +F + S PILT++  EGA + F V +  +    
Sbjct: 145 YRTAYLSAILRLRSFVEFQFMLYFQKNHFTKVSPPILTSNDCEGAGELFQVSTNTSPTAS 204

Query: 190 SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           S++  P       QL   ++A    R + ++PCFR E   + R   EF+ L++EM FV  
Sbjct: 205 SYFGKPTYLTVSTQLHLEILALSLSRCWTLSPCFRAEKSDTPRHLSEFWMLEVEMCFVNS 264

Query: 247 -DDILNTMENVLRGVFE 262
            +++ + +E  ++ + +
Sbjct: 265 VNELTSFVETTIKHIIK 281


>gi|195058964|ref|XP_001995535.1| GH17710 [Drosophila grimshawi]
 gi|193896321|gb|EDV95187.1| GH17710 [Drosophila grimshawi]
          Length = 582

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 117/249 (46%), Gaps = 22/249 (8%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           + ++G +H +R  G  +IF D+R      QV+A+        AKS ++E     D   + 
Sbjct: 115 LSVAGRIHAIRESGAKLIFYDLRGEGVKLQVMAS--------AKSYKNEMAFEQDTAKLR 166

Query: 80  RSAETINAN-----IITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           R  + I  N        G++ +   ++++LS     LP   FG ++  +  R++ R+LDL
Sbjct: 167 R-GDIIGVNGHPGKTKKGELSIMPTELKLLSPCLHMLPHLHFGLKD--KETRYRQRYLDL 223

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              + + +    R +II+ +R  +    F+E  TP++   +    A+ F+      +   
Sbjct: 224 ILNNKVRETFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNELKMDL 283

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++ 
Sbjct: 284 F-MRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYMAYADYHDVIE 341

Query: 252 TMENVLRGV 260
             E ++ G+
Sbjct: 342 LTEQMVSGM 350



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 525 ALEYGLPPTGGWGMGIDRLTMFLTDSNNIKEVLLFP 560


>gi|218663109|ref|ZP_03519039.1| lysyl-tRNA synthetase protein [Rhizobium etli IE4771]
          Length = 498

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 124/269 (46%), Gaps = 26/269 (9%)

Query: 2   HRYRTHSCGDLGVS--------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +LG          +    V ++G V+  R  G  +F+DI D  G  Q+ ++
Sbjct: 36  HFHRTMTNAELGTKYESLEPDVETQDVVTVAGRVYSSRNSG--MFMDIHDASGKIQIFSH 93

Query: 54  PDSACFEIAKSVRSEWV--LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
            D    E    +    +  L  D  V+ R+          G++ ++AQKIE+L+ +  LP
Sbjct: 94  KDVTGEEARPLLPMIDIGDLIGDTGVVRRTKR--------GELTINAQKIEVLTTSL-LP 144

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILT 170
           +P          +R++ R LD+  +   K    +R++I++ +R  M  + F+E  TP+L 
Sbjct: 145 MPEKWHGHSDIELRYRKRHLDIMTNEDSKLRFQQRSKIVSGIRRFMENDGFMEVETPMLQ 204

Query: 171 A-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSD 228
           +      A  F       +   Y L  AP+ + +  + SG  D+ F+I   FR+E   + 
Sbjct: 205 SIYGGATAEPFKTHHNTLKLDMY-LRIAPELFLKRTLVSGLTDKVFEINRNFRNEGVSTR 263

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVL 257
             P EF  ++   ++ + +D+++ +E + 
Sbjct: 264 HNP-EFTMMECYWAYADYEDMMDLVERLF 291



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 12/98 (12%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++  CN +E+ +           R  M E + QA +     K++ E        A   G
Sbjct: 405 RFETYCNAWELGNAFSELNDPEEQRRRMVEQLEQAHARGENDKQLDEE----FLDAIDQG 460

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR++MLL  A ++R+V LFP  ++  D
Sbjct: 461 MPPAGGLGIGVDRLIMLLTNAPSIRDVILFPARRSKAD 498


>gi|255964979|ref|NP_345214.3| lysyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|14972186|gb|AAK74854.1| lysyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
          Length = 491

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 152/366 (41%), Gaps = 50/366 (13%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D      ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 51  LHDKNETATIAGRLITKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 110

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 111 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 159

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 160 YLDLISNRESFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 218

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 219 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 277

Query: 248 DILNTMENVLRGVFEEFS-------NGNTVSNN--FLRICYDDAIRR-YGTD-------- 289
           DI++  E +++   +           G  +  N  F R+   DAIR   G D        
Sbjct: 278 DIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFKRVHMVDAIREITGVDFWQDMTLE 337

Query: 290 -----KPDLRNPIIMHNVTE--HFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGN 337
                  + + P+  H  TE  H +++ F  F +   + P    G+ V   P AK    +
Sbjct: 338 EAKAIAAEKKVPVEKH-YTEVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPED 396

Query: 338 RAFCDR 343
           + F DR
Sbjct: 397 QRFTDR 402



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 426 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 485

Query: 561 LFP 563
           LFP
Sbjct: 486 LFP 488


>gi|95928932|ref|ZP_01311677.1| tRNA synthetase, class II (D, K and N) [Desulfuromonas acetoxidans
           DSM 684]
 gi|95134833|gb|EAT16487.1| tRNA synthetase, class II (D, K and N) [Desulfuromonas acetoxidans
           DSM 684]
          Length = 304

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 13/150 (8%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202
           +R R++ ++R   +A+ F+E  TP  +  ++PE   D +        S   L  +P+   
Sbjct: 17  ERARMMQTIRAFFVAQEFLEVDTPYRIPCNAPEAHIDPVT------SSGQVLHTSPELCM 70

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR---- 258
           + L+A+G++R FQ+  C+R E+ R  R  GEF  L+   +  +  D++   E +LR    
Sbjct: 71  KRLLAAGYERIFQLCHCWRAEE-RGQRHLGEFTMLEWYRAEADYTDLMEDCEGLLRALCP 129

Query: 259 -GVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
            G         T+ + F R+   DA  RY 
Sbjct: 130 QGTLSYQGMSITLQDPFERLTLSDAFDRYA 159


>gi|300859348|ref|YP_003784331.1| lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686802|gb|ADK29724.1| lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|308277282|gb|ADO27181.1| lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 1083

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 31/267 (11%)

Query: 5   RTHSCGDLGVSDVGSFVR-----LSGWVHRVRPHGGIIFLD-IRDHYGITQVVANPDSAC 58
           RT S  +L  +D    V      ++G V  +R HGG++F D + +H  +  V+       
Sbjct: 626 RTTSIKELLAADATHTVSEAPISVTGRVAFIRDHGGVVFADLVEEHTKLQLVIERSAGQT 685

Query: 59  FEIAKSV--RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             + K +  R + +     L  SR+      ++I    +++A+ +         P+P   
Sbjct: 686 MTLFKHLVSRGDLISATGQLGESRNG---TRSLIVSSWDMAAKSLT--------PMP--- 731

Query: 117 EREYPES---IRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TA 171
               P S   +R K+R +D   +    +I + R++ ++++R  +  + ++E  TPIL T 
Sbjct: 732 --RVPLSNPHLRAKFRHMDFALNKKATDIFLARSKAVSAVRSVLQEQGYMEAETPILQTI 789

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                AR F    R    +   L  AP+ Y + L+  G  R F+I   FR+E   S   P
Sbjct: 790 HGGANARPFRTHIRAYDQNL-TLRIAPELYLKRLVVGGIPRVFEIGRNFRNEGVDSTHNP 848

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLR 258
            EF  L+   S+   D +    E ++R
Sbjct: 849 -EFTSLEAYQSYGNWDTMRVLTEELIR 874



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 13/100 (13%)

Query: 479  AFQYDLVCNGFEIASGGIR--------NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +              +S+  L+A      + E+ EN      +A Q
Sbjct: 983  AQRWDLVACGMELGTAYTELADPLEQYARLSDQSLRAAGGDAEAMELDEN----FLKALQ 1038

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             GMPP GG+  GIDR+VM L G +N+REV  FP  +   D
Sbjct: 1039 FGMPPTGGLGIGIDRLVMFLTG-QNIREVLSFPFVRPDTD 1077


>gi|258565823|ref|XP_002583656.1| hypothetical protein UREG_06623 [Uncinocarpus reesii 1704]
 gi|237907357|gb|EEP81758.1| hypothetical protein UREG_06623 [Uncinocarpus reesii 1704]
          Length = 937

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 2/129 (1%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           ++  R+ II  +R   +  NF E STPI+ +A+    AR F   +  +     AL  AP+
Sbjct: 81  SLKARSSIIQHIRNFFLERNFTEVSTPIIASAAGGATARPFHTTASESPDRLLALRIAPE 140

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + L+  GFDR F+I P FR+E       P EF   +   +F + + ++    ++L G
Sbjct: 141 LWLKRLIVGGFDRIFEIGPSFRNEGLDKTHNP-EFTTCEFYQAFADLERLMQMTRSILAG 199

Query: 260 VFEEFSNGN 268
           +  +    N
Sbjct: 200 ISHDIKQLN 208


>gi|297802054|ref|XP_002868911.1| hypothetical protein ARALYDRAFT_490730 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314747|gb|EFH45170.1| hypothetical protein ARALYDRAFT_490730 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SG  R H  E++ +      I  + +         AF+ G PPHGG   
Sbjct: 419 FDVFIRGEEIMSGAQRIHDPELLEKRARECCIDVKTISTYID----AFRYGAPPHGGFGV 474

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VMLL    N+R+ SLFP
Sbjct: 475 GLERVVMLLCALNNIRKTSLFP 496



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 18/239 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCI 73
           VGS V + G VH+ R  G  +F+ +R+     Q V       +   +  K +  E V+ +
Sbjct: 62  VGSEVSIRGRVHKNRLVGTKLFVILRESGFTVQCVVEETRVGANMIKFVKQLSRESVVEL 121

Query: 74  DGLV----MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----ESI 124
            G+V       +  T   N++  +  L+   +   +   E  +   G+   P     +  
Sbjct: 122 IGVVSHPKKPLTGTTQQKNVLPRRSLLNLPLVVEDAARSESDIEKSGKDGKPAARVLQDT 181

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRI-INSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           R   R LD+R          + ++ I+ M C       +E  TP L A S EG       
Sbjct: 182 RLNNRVLDIRTPANQAIFRIQCQVQIDIMICHY-PNRVLEIHTPKLMAGSSEGGSAVF-- 238

Query: 184 SRVN-QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
            R++ +G    L Q+PQ +KQ+ +     R F++ P FR ED  + R   EF  LD+EM
Sbjct: 239 -RLDYKGQPACLAQSPQLHKQMAICGDMRRVFEVGPVFRAEDSFTHRHLCEFVGLDVEM 296


>gi|239996520|ref|ZP_04717044.1| asparaginyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 465

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 126/317 (39%), Gaps = 58/317 (18%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   VG  V + GWV   R    G+ F+ + D   +   QV+A    + +   + + +  
Sbjct: 12  GKYAVGESVTVKGWVRTRRDSKAGLSFIALHDGSCFDPVQVIALNSLSNYADIQRLTAGC 71

Query: 70  VLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRFK 127
            L + G V     +        GQ +E+ A  +E+L   E     P+  +R   E +R +
Sbjct: 72  SLSVTGTVKESQGQ--------GQAVEIDATDVEVLGWVENPDTYPMAAKRHSIEYLR-E 122

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           Y  L  R + +      R  +  ++      + +   STPILTAS  EGA +     RV+
Sbjct: 123 YAHLRPRTNVIGAVTRVRNCLSQAIHRFFHEKGYFWISTPILTASDTEGAGEMF---RVS 179

Query: 188 QGSFYALPQAPQ---QYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
                 LP+  +    Y +        L  SG            + +   P FR E+  +
Sbjct: 180 TLDMMNLPRDDKGNVDYSEDFFGKETYLTVSGQLNVETYCTAMSKVYTFGPTFRAENSNT 239

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVL----RGVFEEFSNG---------------- 267
            R   EF+ ++ E++F E  D+    E++L    + V EE  +                 
Sbjct: 240 SRHLAEFWMIEPEVAFAELKDVAQLAEDMLKYVCKAVLEELPDDMAFFAQRIKKDAIERL 299

Query: 268 -NTVSNNFLRICYDDAI 283
              VS++F+R+ Y DAI
Sbjct: 300 EKLVSSDFVRMDYTDAI 316



 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V       +G+SKE         YR  +  G  PH G  
Sbjct: 380 DVLAPGIGEIIGGSQREERLDVFDARLDEMGLSKEDY-----AWYRDLRRYGTVPHSGFG 434

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R+V  + G +NVR+V  FP +
Sbjct: 435 LGFERLVAYVTGMQNVRDVIPFPRT 459


>gi|255532907|ref|YP_003093279.1| asparaginyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255345891|gb|ACU05217.1| asparaginyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 482

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 118/280 (42%), Gaps = 34/280 (12%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSAC 58
           +HR +  S   L   +    V + GWV   R +    F+ I D    G  QVV + +   
Sbjct: 2   IHREKVKSL--LETEEFNREVTVMGWVRTFRNNQ---FIAINDGSCMGNIQVVVDFNHTD 56

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGE 117
             + K + +   + ++G+++         ++  GQ +++ A  IEIL  ++    P+  +
Sbjct: 57  EALLKRITTGAAIAVNGIIVE--------SVGKGQRVDIKATSIEILGDSDPEKFPLQPK 108

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           +   E +R +   L  R +T +     R  +  ++        F+   TPI+TAS  EGA
Sbjct: 109 KHSLEFLR-EIAHLRFRTNTFNAIFKVRHALAFAIHQFYNERGFVYMHTPIITASDAEGA 167

Query: 178 --------RDFLVPSRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCF 220
                    D   P R   G       F+A         QL   L A  F + +   P F
Sbjct: 168 GEMFRVTTLDLENPPRTEDGKVDFSEDFFARSTNLTVSGQLEGELAAMAFGQIYTFGPTF 227

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           R E+  + R   EF+ ++ E++F + +D +   E++L+ V
Sbjct: 228 RAENSNTTRHLAEFWMVEPEVAFADLEDNMQLAEDMLKYV 267


>gi|328773412|gb|EGF83449.1| hypothetical protein BATDEDRAFT_9285 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 571

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 102/241 (42%), Gaps = 12/241 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V++SGWVHR+R  G  ++F+ +RD  G  Q V          A ++  E  + I G++ +
Sbjct: 143 VKISGWVHRLRVQGKDMMFVVLRDGSGYIQCVLTGKQCNTYDALTLTVESTVTIYGVIKT 202

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES---IRFKYRFLDLRRD 136
                       G  EL +    I   A       FG +   ES   I    R L LR +
Sbjct: 203 ----VPEGKSAPGGHELISDYWVIHGKAPGGD-EAFGNKLNTESSPDILLDQRHLVLRGE 257

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T    +  R  ++   R    +    E + P++  +  EG       +   + ++  L Q
Sbjct: 258 TTSSIMRVRALMLKGFRSFFESRFITEVTPPLMVQTQVEGGSTLFEFNYYEEKAY--LTQ 315

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  + S  D Y  I   FR E   + R   EF   + E++F+  DD+L+ ME++
Sbjct: 316 SSQLYLETCLPSIGDSYC-ITESFRAEKSHTRRHLSEFTHCEAELAFITFDDLLSCMEDM 374

Query: 257 L 257
           +
Sbjct: 375 V 375


>gi|238810135|dbj|BAH69925.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 508

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 131/286 (45%), Gaps = 32/286 (11%)

Query: 5   RTHSCGDLGVSD-----VGSFVRLSGWVHRVRPH--GGII-----FLDIRDHYGITQVVA 52
           + +  G L  SD      G F R      +V+ +  G +I     FL ++D  G  QV  
Sbjct: 48  KAYGLGKLSTSDELNKKYGQFAREELEAKKVKKNISGRLITARGPFLVLKDRKGTIQVYF 107

Query: 53  NP--DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EE 109
           N   +    +I ++     +L + GL+M            TG++ + AQ I++L+ A + 
Sbjct: 108 NKKENPELTKIVETFDLGDILWVRGLLMKTH---------TGEMTVRAQDIQLLTKALKP 158

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPI 168
           LP    G  +  E  R+++R+LDL  +   +N  + RT+I+  +R      +++E  TP 
Sbjct: 159 LPDKFHGLTDTEE--RYRHRYLDLITNPESRNTFIMRTKIVQWIRDYFNKLDYLEAETPF 216

Query: 169 LTAS-SPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           L    S   A+ F    + +NQ   + L  A +   + L+  GF+R +++   FR+E   
Sbjct: 217 LHDYLSGAAAKPFTTHHNSLNQD--FVLRIATEIPLKKLVVGGFERVYEMGRIFRNEGYD 274

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN 272
           +   P EF  ++   ++   + ++N  E +++ + ++      V+N
Sbjct: 275 TTHNP-EFTTIEFYEAYSNVEGMMNRTETLIKELCKKIGKSKFVTN 319



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG   GIDR+VMLL    ++R+V LFP
Sbjct: 466 ALEYGMPPTGGCGIGIDRLVMLLTETDSIRDVLLFP 501


>gi|226499948|ref|NP_001141771.1| hypothetical protein LOC100273907 [Zea mays]
 gi|194705876|gb|ACF87022.1| unknown [Zea mays]
          Length = 437

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 87/174 (50%), Gaps = 13/174 (7%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R+LDL  +   ++I K R++I++ +R  +    F+E  TP++   +    AR 
Sbjct: 85  QETRYRQRYLDLMVNHEVRHIFKTRSKIVSFIRKFLDDREFLEVETPMMNMIAGGAAARP 144

Query: 180 FLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           F+   + +N   F  +  AP+ Y + L+  G DR ++I   FR+E       P EF   +
Sbjct: 145 FVTHHNELNMRLFMRI--APELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTTCE 201

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNG-------NTVSNNFLRICYDDAIRR 285
             M++ + +D++   E +L G+ ++ + G       N V+N  + I +    RR
Sbjct: 202 FYMAYADYNDLMELTETMLSGMVKDLTGGYKIKYHANGVTNPPIEIDFTPPFRR 255



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+ P GG   GIDR+ MLL  ++N++EV LFP
Sbjct: 396 ALEYGLAPTGGWGLGIDRLTMLLTDSQNIKEVLLFP 431


>gi|94987146|ref|YP_595079.1| asparaginyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|123385048|sp|Q1MQG9|SYN_LAWIP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|94731395|emb|CAJ54758.1| Aspartyl/asparaginyl-tRNA synthetases [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 455

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 67/312 (21%), Positives = 119/312 (38%), Gaps = 45/312 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GW+   R   G +FL++ D   +   Q + N  SA +++   V +   + + G ++
Sbjct: 19  VHVGGWIRTRRNAKGFVFLELNDGSCLKNIQCIINEGSAAWDMLDGVNTGACVSVYGKLV 78

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                        GQ  E+  +K+ +  +A     P+  +R   E +R     L +R + 
Sbjct: 79  PSPGR--------GQDWEIQVEKMVVHGLAAPEVFPLQKKRHSDEFLR-TIAHLRVRTNK 129

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--------- 188
                  R     ++      + F    TPILT S  EGA +    +  +          
Sbjct: 130 YGAIFRIRAEAAQAIHNYFYKKGFYYIHTPILTGSDCEGAGEMFRVTTAHSSNDSQSSDN 189

Query: 189 --GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
             G   +L  + Q   + L A G  + +   P FR E+  + R   EF+ ++ EM+F + 
Sbjct: 190 FFGKECSLTVSGQLEAECL-AMGLGKVYTFGPTFRAENSNTPRHAAEFWMVEPEMAFADL 248

Query: 247 DDILNTME----NVLRGVFEEFSNG-----------------NTVSNNFLRICYDDAIRR 285
            D +N  E     V+R V +   +                  N ++  F+R  Y DAI  
Sbjct: 249 QDNMNLAEELTCEVIRKVLQCHIDDIMLLDKYVQPGLIKALENIIAKPFIRCSYHDAITI 308

Query: 286 YGTDKPDLRNPI 297
             +   D   P+
Sbjct: 309 LLSSHKDFEFPV 320



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 23/40 (57%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G  PH G   G +R+VMLL G  N+R+V  FP +  + + 
Sbjct: 416 GTVPHAGFGLGFERLVMLLTGVSNIRDVLPFPRTPGYLEF 455


>gi|46578424|ref|YP_009232.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|59798549|sp|Q72G53|SYN_DESVH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|46447835|gb|AAS94491.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311232356|gb|ADP85210.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 461

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 109/279 (39%), Gaps = 36/279 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L  +     +RL GWV   R   G  FL+I D   +  + A  D      A  
Sbjct: 3   RTQIVDALAATAPQPVIRLCGWVRTRRDAKGFSFLEINDGSCLANIQAIVDEGIPAYANI 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITG-----QIELSAQKIEILSVAEELPLPVFGERE 119
                     G V + +A  I   ++       + E+  Q + +L  A+    P+  +R 
Sbjct: 63  ----------GAVSTGAAVDITGELVESPGKGQKWEVRVQTLTLLGAADAETYPLQKKRH 112

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R     L  R +        R+    ++        F    TPILT S  EGA +
Sbjct: 113 SDEFLR-SIAHLRARTNKYGAAFRIRSEAAFAIHEFYRERGFFYVHTPILTGSDCEGAGE 171

Query: 180 -FLVPSRVNQGSFYALPQAPQQYK--------------QL---LMASGFDRYFQIAPCFR 221
            F V +   +GS  A P +  +Y+              QL    +A G  + +   P FR
Sbjct: 172 MFRVTTLPVEGS--ATPASGNRYENDFFGKECNLTVSGQLEAETLALGLGKVYTFGPTFR 229

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            E+  + R   EF+ ++ E++F + ++ +N  E++ R V
Sbjct: 230 AENSNTPRHAAEFWMIEPEVAFADLEEDMNLAEDMTRTV 268


>gi|307298991|ref|ZP_07578793.1| lysyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915416|gb|EFN45801.1| lysyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 501

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 117/268 (43%), Gaps = 18/268 (6%)

Query: 24  SGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVMSR 80
           +G V  VR HG   F  +RD+    Q     D   +  FE+ K       + I   V   
Sbjct: 58  AGRVVAVRNHGKSSFFVLRDNSDRIQAYIRLDGVGAESFEVFKKY-----VNIGDFV--- 109

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLD-LRRDTL 138
             +       TG+I +  ++ EILS +   +P    G ++  + I ++ R+++ L  D  
Sbjct: 110 GVKGFPFKTHTGEISVFVKEFEILSKSIRMMPEKWHGVKD--KEIIYRQRYVEMLSSDDA 167

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
            K    R+ +   +R  + ++NF+E  TP+L   +    AR F     V +   Y L  A
Sbjct: 168 LKRFKIRSELFRLVREFLQSKNFVEVDTPMLHYLTGGASARPFKTHINVFESDMY-LRIA 226

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + +  +  GF+R F+I   FR+E       P EF  +++  ++ + +DI+N  E ++
Sbjct: 227 EELFLKRYLVGGFERIFEIGKNFRNEGVSYKHHP-EFTMMELYWAYADYNDIMNITEEMI 285

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             V  E +    +S     I +    RR
Sbjct: 286 NFVVREIAGSEIISYQGKEIDFSRPWRR 313



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP GG+  G DRI+ML+  + ++R++  FP+
Sbjct: 446 RALEYGMPPTGGLGVGWDRIIMLVTDSPSIRDIIPFPL 483


>gi|255016153|ref|ZP_05288279.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 560

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 131/286 (45%), Gaps = 29/286 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK---SVRSEWVLCIDGLV 77
           VR++G +   R  G   F++++D  G  QV  + D  C +  K   +V  + +L I   V
Sbjct: 39  VRIAGRIMSRRIMGKASFMELQDSEGRIQVYISRDDICPDENKDTYNVVFKKLLDIGDFV 98

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYR 129
                +        G+I + AQ++ +LS +   PLPV   ++         PE +R++ R
Sbjct: 99  ---GIKGFVFRTQMGEISVHAQELTVLSKSLR-PLPVVKYKDGVAYDGFNDPE-LRYRQR 153

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL  +   K+I +KR  II +MR  +    + E  TPIL + +    AR F       
Sbjct: 154 YVDLVVNEGVKDIFMKRAAIIKTMRTALDEAGYTEVETPILQSIAGGASARPFTTHHNSL 213

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + +
Sbjct: 214 DIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMELYVQYKDYN 271

Query: 248 DILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
            +++  E +L        G  E   +G T+S    F R+   +AI+
Sbjct: 272 WMMSFTEKLLERICIAVNGTSESTIDGKTISFKAPFRRLPILEAIK 317



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP
Sbjct: 444 RALQFGMPPTSGIGIGIDRLVMLMTGQTTIQEVLLFP 480


>gi|302207030|gb|ADL11372.1| Lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
          Length = 1111

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 31/267 (11%)

Query: 5   RTHSCGDLGVSDVGSFVR-----LSGWVHRVRPHGGIIFLD-IRDHYGITQVVANPDSAC 58
           RT S  +L  +D    V      ++G V  +R HGG++F D + +H  +  V+       
Sbjct: 654 RTTSIKELLAADATHTVSEAPISVTGRVAFIRDHGGVVFADLVEEHTKLQLVIERSAGQT 713

Query: 59  FEIAKSV--RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             + K +  R + +     L  SR+      ++I    +++A+ +         P+P   
Sbjct: 714 MTLFKHLVSRGDLISATGQLGESRNG---TRSLIVSSWDMAAKSLT--------PMP--- 759

Query: 117 EREYPES---IRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TA 171
               P S   +R K+R +D   +    +I + R++ ++++R  +  + ++E  TPIL T 
Sbjct: 760 --RVPLSNPHLRAKFRHMDFALNKKATDIFLARSKAVSAVRSVLQEQGYMEAETPILQTI 817

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                AR F    R    +   L  AP+ Y + L+  G  R F+I   FR+E   S   P
Sbjct: 818 HGGANARPFRTHIRAYDQNL-TLRIAPELYLKRLVVGGIPRVFEIGRNFRNEGVDSTHNP 876

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLR 258
            EF  L+   S+   D +    E ++R
Sbjct: 877 -EFTSLEAYQSYGNWDTMRVLTEELIR 902



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 13/100 (13%)

Query: 479  AFQYDLVCNGFEIASGGIR--------NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +              +S+  L+A      + E+ EN      +A Q
Sbjct: 1011 AQRWDLVACGMELGTAYTELADPLEQYARLSDQSLRAAGGDAEAMELDEN----FLKALQ 1066

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             GMPP GG+  GIDR+VM L G +N+REV  FP  +   D
Sbjct: 1067 FGMPPTGGLGIGIDRLVMFLTG-QNIREVLSFPFVRPDTD 1105


>gi|190893501|ref|YP_001980043.1| lysyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|238692556|sp|B3Q0S4|SYK_RHIE6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|190698780|gb|ACE92865.1| lysyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 498

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 137/303 (45%), Gaps = 31/303 (10%)

Query: 2   HRYRTHSCGDLGVS--------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +LG          +    V ++G V+  R  G  +F+DI D  G  Q+ ++
Sbjct: 36  HFHRTMTNAELGAKYESLEPDVETQDVVTVAGRVYSSRNSG--MFMDIHDASGKIQIFSH 93

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D       +  R+   +   G ++  +   +      G++ ++AQKIE+L+ +  LP+P
Sbjct: 94  KDVT----GEEARALLPMIDIGDIIGVTG--VVRRTKRGELTINAQKIEMLTKSL-LPMP 146

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA- 171
                     +R++ R LD+  +   K    +R++I++ +R  M  + F+E  TP+L + 
Sbjct: 147 EKWHGLSDIELRYRKRHLDIMTNEDSKLRFQQRSKIVSGIRRFMENDGFMEVETPMLQSI 206

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRL 230
                A  F       +   Y L  AP+ + +  + SG  D+ F+I   FR+E   +   
Sbjct: 207 YGGATAEPFKTHHNTLKLDMY-LRIAPELFLKRTLVSGLTDKVFEINRNFRNEGVSTRHN 265

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGV------FEEFSNGN---TVSNNFLRICYDD 281
           P EF  ++   ++ + +D+++ +E +   +        EF  G+   +    F R+   D
Sbjct: 266 P-EFTMMECYWAYADYEDMMDLVERLFEALALSIHGTTEFDFGDKRLSFKGPFKRVPMPD 324

Query: 282 AIR 284
           A++
Sbjct: 325 AVK 327



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 12/98 (12%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++  CN +E+ +           R  M E + QA +     K++ E        A   G
Sbjct: 405 RFETYCNAWELGNAFSELNDPEEQRRRMVEQLEQAHARGEKEKQLDEE----FLDAIDQG 460

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR++MLL  A ++R+V LFP  +N  D
Sbjct: 461 MPPAGGLGIGVDRLIMLLTNAPSIRDVILFPARRNKAD 498


>gi|331266480|ref|YP_004326110.1| lysyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326683152|emb|CBZ00770.1| lysyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 496

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 112/251 (44%), Gaps = 19/251 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D+     ++G +   R  G + F  ++D  G  Q+    D      +EI K       
Sbjct: 56  LHDLNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLR 258
           DI++  E +++
Sbjct: 283 DIMDLTEGIIQ 293



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|323305821|gb|EGA59559.1| Slm5p [Saccharomyces cerevisiae FostersB]
          Length = 492

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 119/257 (46%), Gaps = 24/257 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQV-----VANPDSACFEIAKSVRSEWVLCIDG 75
           + ++GW+  +R    I FLD++D   +  +     + N D   F   K +++   L I  
Sbjct: 34  ISINGWIKSIRLLKRIAFLDLQDGTSVNPLRIVIPLTNTDEVQF--LKILKTGQTLSISN 91

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLR 134
                +           QI+   + I+++  V+E  PL    +++Y +++R+      L+
Sbjct: 92  ATWQSTPN--RKQPFELQIKNPVKSIKLVGPVSENYPL----QKKY-QTLRYLRSLPTLK 144

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARD-FLVPSRVN--QG 189
             T + + + R R     +  +  +  +F + S PILT++  EGA + F V +  +    
Sbjct: 145 YRTAYLSAILRLRSFVEFQFMLYFQKNHFTKVSPPILTSNDCEGAGELFQVSTNTSPTAS 204

Query: 190 SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           S++  P       QL   ++A    R + ++PCFR E   + R   EF+ L++EM FV  
Sbjct: 205 SYFGKPTYLTVSTQLHLEILALSLSRCWTLSPCFRAEKSDTPRHLSEFWMLEVEMCFVNS 264

Query: 247 -DDILNTMENVLRGVFE 262
            +++ + +E  ++ + +
Sbjct: 265 VNELTSFVETTIKHIIK 281


>gi|297790381|ref|XP_002863084.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308901|gb|EFH39343.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 320

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 6/165 (3%)

Query: 101 IEILSVAEELPLPVFGEREYPE---SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157
           ++  S  EE      GER  P      R   R LDLR          R+ I N  R  ++
Sbjct: 116 VDAASQKEEDEQGASGERRTPHVSLDTRLNNRVLDLRTPANQAIFRVRSHIENFFRQYLL 175

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
           A  F    TP L A    G         +  G   +L Q+ Q +KQ+ ++SGF + F I 
Sbjct: 176 ALEFDSIHTPKLLARKINGGASVFCLDYI--GKDASLAQSAQLHKQMAISSGFTKVFDIG 233

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVF 261
             FR E   ++R   EF  L++EM      +++++ ++ +   +F
Sbjct: 234 TYFRSERSSTNRHLTEFVTLNVEMELKYHYNEVMDLVDGLFADIF 278


>gi|195381141|ref|XP_002049313.1| GJ20822 [Drosophila virilis]
 gi|194144110|gb|EDW60506.1| GJ20822 [Drosophila virilis]
          Length = 460

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 118/287 (41%), Gaps = 39/287 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  +++ GW+  VR     IFLDI D  G T       S  F++      +      G V
Sbjct: 24  GDTLQIQGWIKNVRRLKNNIFLDISD--GST-------SEKFQLVVPRNLDTHQLTLGSV 74

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +S       A    G  EL A +++ L+    +   P   ++++P     ++  L  R D
Sbjct: 75  VSAVGRVQLAP--NGHYELHADEVKALAEGHVQSGYPFSPKQKHPPEYVREHLHLRSRID 132

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +   +  R +   ++   M A NF++ +TPILT +  EGA +     RV   S   L Q
Sbjct: 133 YIAAQMRIRHKAQKAIHDYMDALNFVQINTPILTTNDCEGAGEVF---RVQPDSERLLKQ 189

Query: 197 ------APQQ--YKQLL------------MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                  P+Q  + Q +            M+ G    +  AP FR E+ +S     EFY 
Sbjct: 190 MARPNVPPEQSYFDQKVFLSVSGQLHLEAMSYGLGNTYTFAPAFRAENSKSPLHLAEFYM 249

Query: 237 LDMEMSFVEQDDILNT-MENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
            + E+  +EQ D L   +E +L+ +     N    S + L  C  +A
Sbjct: 250 FEAELVHIEQLDTLAAFIERMLKDITNRLLNS---SASDLHFCQQNA 293


>gi|88812906|ref|ZP_01128150.1| lysyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88789828|gb|EAR20951.1| lysyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 506

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 11/245 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  ++D  G  Q+    D    E+ +  +S  V  I G     
Sbjct: 67  VKVAGRMIGKRVMGKASFAHLQDMSGRIQLFLRRDDLSSEVYQQFKSWDVGDIIG----- 121

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
            AE        G++ +    I +L+ +   PLP        +  R++ R++DL   +   
Sbjct: 122 -AEGHVYKTQAGELSVRVSAIRLLTKSLR-PLPEKYHGLADQEARYRQRYVDLIVNENAR 179

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  + R RII S+R       F+E  TP++        AR F+          Y L  AP
Sbjct: 180 RTFILRGRIIQSIRAAFNEWGFLEVETPMMQPIPGGAAARPFITHHNALDVDLY-LRIAP 238

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF++ ++I   FR+E   +   P EF  L+   ++ +  D+++  E +LR
Sbjct: 239 ELYLKRLVVGGFEKVYEINRNFRNEGVSTRHNP-EFTMLEFYQAYADYHDLMDLTEELLR 297

Query: 259 GVFEE 263
            +  E
Sbjct: 298 RLAAE 302



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L+  G EIA+G    + ++   + F      KE  +           RA + G+PP 
Sbjct: 411 RFELIIGGREIANGFSELNDADDQAERFRAQVAGKEAGDEEAMFYDADFIRALEYGLPPT 470

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML   A ++R+V LFP
Sbjct: 471 AGEGIGIDRLVMLFTDAPSIRDVLLFP 497


>gi|19922416|ref|NP_611176.1| CG6796 [Drosophila melanogaster]
 gi|7302847|gb|AAF57921.1| CG6796 [Drosophila melanogaster]
 gi|17945309|gb|AAL48711.1| RE15573p [Drosophila melanogaster]
 gi|220948064|gb|ACL86575.1| CG6796-PA [synthetic construct]
 gi|220957268|gb|ACL91177.1| CG6796-PA [synthetic construct]
          Length = 460

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 138/328 (42%), Gaps = 52/328 (15%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L  +  G  + + GW+  VR      FLDI D  G T       S+ F++      E   
Sbjct: 18  LKTNKPGDSLAIQGWIKNVRRLKNNTFLDIND--GST-------SSRFQVVVPRTPENQH 68

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGEREYPESIRFKY 128
              G V++   +   A    G  EL A ++E+L+   + E  P     ++  PE +R ++
Sbjct: 69  LAPGSVIAAVGKIQVAP--NGSFELHANQVEMLAEGRLQEGYPFSP-KQKHPPEYVR-EH 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R D +   +  R +   ++   M  ++F++ +TP+LT +  EGA +       +Q
Sbjct: 125 LHLRSRVDFVAAQMRVRHKAQKAIHDYMDDQDFVQINTPLLTTNDCEGAGEVFRVQPDSQ 184

Query: 189 GSFYAL--PQAP--QQY---KQLL----------MASGFDRYFQIAPCFRDEDPRSDRLP 231
                +  P  P  Q Y   K  L          M  G  + + ++P FR E+ +S    
Sbjct: 185 DLLKQMNRPNIPMEQSYFDSKVFLSVSGQLHLEAMTYGLGKTYTLSPAFRAENSKSPLHL 244

Query: 232 GEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE----------EFSNGNTVSNNFLR---- 276
            EFY  + E++ +E+ + +   +E +L+ V             F   N+ SN+ L     
Sbjct: 245 AEFYMFEAELAHLEEMEKLAQFIEQMLKSVTNRLLETSGEDLSFCQRNSNSNSDLPWLQV 304

Query: 277 ----ICYDDAIRRYGTDKPDLRNPIIMH 300
               + YD+A++    +K  L+ PI ++
Sbjct: 305 PWKIMSYDEALQVLQENKDSLKTPISLN 332


>gi|323465359|gb|ADX77512.1| lysyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 495

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/261 (20%), Positives = 120/261 (45%), Gaps = 19/261 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACF 59
           ++  ++  +L   +  S   ++G +   R  G   F  I+D  G  Q+    D    A F
Sbjct: 43  QWDQYAKEELAEKETESHTVIAGRIMTKRGKGKAGFAHIQDLSGQIQIYVRKDQVGDAQF 102

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER 118
            I  +     ++ ++G++   +         TG++ + A+  ++LS A   LP    G +
Sbjct: 103 GIWNTADLGDIVGVEGIMFKTN---------TGELSVKAKSFKLLSKALRPLPDKHHGLQ 153

Query: 119 EYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
           +  +  R++ R+LDL   +   +  + R+RI+  MR  +  + F+E  TP++   +    
Sbjct: 154 DIEQ--RYRQRYLDLITNEESTQTFINRSRILQEMRNYLNEKGFLEVETPMMHQIAGGAA 211

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F+        + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  
Sbjct: 212 AKPFVTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTM 269

Query: 237 LDMEMSFVEQDDILNTMENVL 257
           +++  ++ +  DI++  E ++
Sbjct: 270 IELYEAYADYKDIMSLTEELV 290



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFP 490


>gi|319776760|ref|YP_004136411.1| lysyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318037835|gb|ADV34034.1| Lysyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 488

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 131/286 (45%), Gaps = 32/286 (11%)

Query: 5   RTHSCGDLGVSD-----VGSFVRLSGWVHRVRPH--GGII-----FLDIRDHYGITQVVA 52
           + +  G L  SD      G F R      +V+ +  G +I     FL ++D  G  QV  
Sbjct: 28  KAYGLGKLSTSDELNKKYGQFAREELEAKKVKKNISGRLITARGPFLVLKDRKGTIQVYF 87

Query: 53  NP--DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EE 109
           N   +    +I ++     +L + GL+M            TG++ + AQ I++L+ A + 
Sbjct: 88  NKKENPELTKIVETFDLGDILWVRGLLMKTH---------TGEMTVRAQDIQLLTKALKP 138

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPI 168
           LP    G  +  E  R+++R+LDL  +   +N  + RT+I+  +R      +++E  TP 
Sbjct: 139 LPDKFHGLTDTEE--RYRHRYLDLITNPESRNTFIMRTKIVQWIRDYFNKLDYLEAETPF 196

Query: 169 LTAS-SPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           L    S   A+ F    + +NQ   + L  A +   + L+  GF+R +++   FR+E   
Sbjct: 197 LHDYLSGAAAKPFTTHHNSLNQD--FVLRIATEIPLKKLVVGGFERVYEMGRIFRNEGYD 254

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN 272
           +   P EF  ++   ++   + ++N  E +++ + ++      V+N
Sbjct: 255 TTHNP-EFTTIEFYEAYSNVEGMMNRTETLIKELCKKIGKSKFVTN 299



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG   GIDR+VMLL    ++R+V LFP
Sbjct: 446 ALEYGMPPTGGCGIGIDRLVMLLTETDSIRDVLLFP 481


>gi|157866772|ref|XP_001681941.1| lysyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68125392|emb|CAJ03251.1| putative lysyl-tRNA synthetase [Leishmania major strain Friedlin]
          Length = 586

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 11/185 (5%)

Query: 91  TGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLD--LRRDTLHKNIVKRTR 147
           + +  L A +I +LS     LP   FG   + +  RF+ R+LD  + RD + K  ++R  
Sbjct: 180 SNEFSLKATEITLLSTCYHMLPDDYFGLSSFEQ--RFRQRYLDFIVNRDNI-KTFIQRAN 236

Query: 148 IINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLL 205
           II  +R      +F+E  TP+L   +    AR F+   + +NQ  F  +  AP+ Y + L
Sbjct: 237 IIKYIRKFFDERDFVEVETPVLNQIAGGAAARPFVTHHNDLNQTMFLRI--APELYLKEL 294

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           +  G DR ++I   FR+E       P EF   +   ++++  D +   E++L G+  E  
Sbjct: 295 VVGGMDRVYEIGKQFRNEGIDLTHNP-EFTSCEAYWAYMDYHDWMTATEDLLYGLAVELH 353

Query: 266 NGNTV 270
               V
Sbjct: 354 GSPIV 358



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 24/40 (60%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   A +  +PP GG   GIDR+VM L    N++EV LFP
Sbjct: 521 GFVAALEHALPPTGGWGLGIDRLVMFLTSQSNIKEVLLFP 560


>gi|241763859|ref|ZP_04761904.1| lysyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241366903|gb|EER61317.1| lysyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 514

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 16/217 (7%)

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
           AE       TG++ +    + +L+ +   P+P        + ++++ R++DL  D    K
Sbjct: 131 AEGTLMKTKTGELSVKVTTLRLLTKSLR-PMPDKFHGVADQEVKYRQRYVDLMTDEAARK 189

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
             V R++ ++ +R  M+   F+E  TP+L    P GA  + F+      +   Y L  AP
Sbjct: 190 RFVARSKAVSGIRDFMVQHGFLEVETPMLH-PIPGGANAKPFVTHHNALEQEMY-LRIAP 247

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D++   E ++R
Sbjct: 248 ELYLKRLLVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYQDLMGFTEQLVR 306

Query: 259 -------GVFEEFSNGNTV--SNNFLRICYDDAIRRY 286
                  G  +    G  V  +  F R+   +AI +Y
Sbjct: 307 DAALKAAGTLQLTYQGREVDLAQPFARLTIREAIFQY 343



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR++MLL  + ++R+V LFP
Sbjct: 472 RALEYGMPPAGGCGIGIDRLMMLLTDSPSIRDVILFP 508


>gi|300707705|ref|XP_002996050.1| hypothetical protein NCER_100909 [Nosema ceranae BRL01]
 gi|263511622|sp|C4V8R9|SYKC_NOSCE RecName: Full=Probable lysyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|239605312|gb|EEQ82379.1| hypothetical protein NCER_100909 [Nosema ceranae BRL01]
          Length = 514

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 6/153 (3%)

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPI 168
           +P   +G ++ PE I ++ R+LDL  +   KN  ++RT II  +R  +  ++F+E  TP+
Sbjct: 147 IPTDYYGLKD-PEII-YRKRYLDLLINKESKNRFIQRTNIIKFIRKYLDDKDFVEVETPL 204

Query: 169 LTASSPEGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L    P GA      +  N+      L  AP+ Y + L+  G DR ++I   FR+E    
Sbjct: 205 LNII-PTGAAAKPFTTHHNELKMNLFLRIAPELYLKKLVIGGMDRVYEIGKLFRNEGIDL 263

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
              P EF   +  M++ + +D++N  E +L G+
Sbjct: 264 THNP-EFTACEFYMAYADYNDMMNMAEEMLNGM 295



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%)

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           +CN +   +  I   M   M     N G  + ++ +       A + G+PP GG   GID
Sbjct: 430 ICNAYTELNNPIEQRMRFKMQAQDINDGDDEAMITDE--DFCVALEYGLPPTGGFGMGID 487

Query: 545 RIVMLLLGAKNVREVSLFP 563
           R+ M +  A N+++V LFP
Sbjct: 488 RLTMFMTDAANIKDVILFP 506


>gi|238809945|dbj|BAH69735.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 456

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 149/357 (41%), Gaps = 61/357 (17%)

Query: 11  DLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSA 57
           D+  SD+ S            + +  WV   R +  I F+ I D   +   QV    +  
Sbjct: 4   DMATSDIKSLFEKSKEFKNKTLEIKAWVTSNRGNKKIRFISINDGSTVQSLQVTCKGEKF 63

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F+    +     + + G+V    A T  A      +EL A K+++L  A+ L  P+  +
Sbjct: 64  DFDKLDQIHLGAAVEVKGIV----ALTPKAQ---QPLELVATKVKLLRDAD-LDFPIQKQ 115

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE-----CSTPILTAS 172
               E++R      D+       N+++ T +I S   + + + F E      + PI+T++
Sbjct: 116 GINLETLR------DIPHVRHRTNLLRATMLIRSTLAKEVNKYFDEHGYLYFNAPIITSN 169

Query: 173 SPEGARD-FLVPSRVNQGSFYALPQAPQQYKQLLMAS----GFDRYFQIAPCFRDEDPRS 227
             EGA + F+V    ++  F+   +A       L A     GF + +  AP FR E   +
Sbjct: 170 DGEGAGETFVVNDGNSKDPFFGTRKATLGVTGQLHAESYAIGFKKVYTFAPTFRAEHSNT 229

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE--------EFSNGN-TVS------- 271
            +   EF+ ++ E++F E  D +   +++L+ V +        EF   N TV        
Sbjct: 230 KKHAAEFWMIEPEVAFYELKDAIKLADDMLKSVIKNTIKKHPAEFKFLNETVDKGLLERL 289

Query: 272 NNFLR-----ICYDDAIRRYGTDKPDLRNPII---MHNVTEHFVHSEFRVFSKILSV 320
           N+FL+     I Y DAI+     K    N  I   +   TEH  +   ++F+  ++V
Sbjct: 290 NHFLKTKLSVIDYRDAIKELAKVKDQFENQDIEFGLDLATEHERYISEKIFNGPVAV 346


>gi|46445980|ref|YP_007345.1| asparaginyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|59798542|sp|Q6MEC9|SYN_PARUW RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|46399621|emb|CAF23070.1| probable asparagine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 467

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 106/269 (39%), Gaps = 34/269 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE--IAKSVRSEWVLC 72
           +G  + L GWV  VR      F++I D   ++  Q++A PD A ++  I +      V  
Sbjct: 19  IGHDITLKGWVRTVRNQKTFTFIEINDGSTLSNFQIIATPDIAGYDQLINQLSTGVSVSA 78

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I  +V S   E          +E+ A  I I+   +     V+  ++   +  F      
Sbjct: 79  IGTIVESPGKEQ--------NLEMQATAITIIGKCDP---EVYLLQKKRHTFEFLRSIAH 127

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T     V R R   +       +   F+   TPI+T S  EGA      + ++Q +
Sbjct: 128 LRPRTNTIGAVTRVRNALAFATHQFFQKRGFLYIHTPIITGSDCEGAGKMFQVTTLDQNN 187

Query: 191 FYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGE 233
               P+    Y Q        L  SG              +   P FR E+  + R   E
Sbjct: 188 PARTPEGRVDYTQDFFGKPTYLTVSGQLNGEIYACALSDVYTFGPTFRAENSNTSRHLAE 247

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           F+ ++ EM+F + +D ++  E+ L+ + +
Sbjct: 248 FWMIEPEMAFADLNDNMDCAEDYLKYILK 276


>gi|322493405|emb|CBZ28691.1| putative lysyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 536

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 77/148 (52%), Gaps = 5/148 (3%)

Query: 124 IRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
           I+++YRF+D+  + ++ ++  KR  I  ++R  + A +F+E  TP+L + +S   A+ F+
Sbjct: 93  IKYRYRFVDMMSNPSVVQHFRKRHAITRALRDFLDARSFVEVETPVLHSVASGANAKPFV 152

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                N    + L  AP+ + +  +  G +R ++I   FR+ED      P EF   +   
Sbjct: 153 THHNANDADLF-LRVAPELHLKQCVVGGMERVYEIGRVFRNEDADRSHNP-EFTTCEFYA 210

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNT 269
           ++   +D++   E +LR +    +NG T
Sbjct: 211 AYHTYEDLMTMTEEILRHL-ALAANGTT 237



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A Q G+PP  G   GIDR+ MLL G+  +RE  LFP+
Sbjct: 402 KALQVGLPPTAGWGMGIDRVAMLLNGSSTIREDILFPL 439


>gi|238917592|ref|YP_002931109.1| lysyl-tRNA synthetase, class II [Eubacterium eligens ATCC 27750]
 gi|238872952|gb|ACR72662.1| lysyl-tRNA synthetase, class II [Eubacterium eligens ATCC 27750]
          Length = 534

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 105/214 (49%), Gaps = 26/214 (12%)

Query: 91  TGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRI 148
           TG+I + A++I +LS + + LP    G  +    +R++ R++DL  +  + +  VKR++I
Sbjct: 162 TGEISVHAEEITLLSKSLQVLPEKFHGITDT--DMRYRQRYVDLIMNPEVKETFVKRSKI 219

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ------APQQYK 202
           I  +R  +   +F+E  TP L +++   A      +R  +  + AL +      + + Y 
Sbjct: 220 IKEIRKFLDGRDFMEVETPTLVSNAGGAA------ARPFETHYNALDEDVKLRISLELYL 273

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + L+  G +R ++I   +R+E   +   P EF  +++  ++ + + ++   E++ R + E
Sbjct: 274 KRLIVGGLERVYEIGRVYRNEGVDTRHNP-EFTLMELYQAYTDYEGMMELTESMFRHLAE 332

Query: 263 EFSNGNTVSNN---------FLRICYDDAIRRYG 287
                  ++ N         F R+  +DAI+ Y 
Sbjct: 333 TVCGTTKITYNGTEIDLGKPFRRLTMNDAIKEYA 366



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           +CN +   +  I     E   Q   N     E  ++       A   GMPP GGI  GID
Sbjct: 451 MCNAYSELNDPI--DQRERFAQQDKNAENGDEEAQHTDEDFLNALAVGMPPTGGIGYGID 508

Query: 545 RIVMLLLGAKNVREVSLFP 563
           R+VMLL  +  +R+V LFP
Sbjct: 509 RLVMLLTDSPAIRDVLLFP 527


>gi|225450809|ref|XP_002279658.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 597

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 4/151 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R+LDL  +   + I K R +II+ +R  +   +F+E  TP++        AR 
Sbjct: 229 QETRYRQRYLDLMLNMEVRQIFKTRAKIISYIRSFLDNLDFLEVETPMMNMIPGGAAARP 288

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  AP+ Y + L+  G DR ++I   FR+E       P EF   + 
Sbjct: 289 FVTHHNDLNMKLY-MRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTTCEF 346

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
            M+F + +D++   E +L G+ +E + G  +
Sbjct: 347 YMAFADYNDVMELTEKMLSGMVKELTGGYKI 377



 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M+L  ++N++EV LFP
Sbjct: 540 ALEYGLPPTGGWGLGIDRLTMMLTDSQNIKEVLLFP 575


>gi|224006297|ref|XP_002292109.1| lysyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220972628|gb|EED90960.1| lysyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 610

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 123/265 (46%), Gaps = 25/265 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVVANPDSACF-----EIAKSVRSEWVLC 72
             V ++G +  +R  G ++F DIR D   +  + +  D A       EI ++++   ++ 
Sbjct: 130 KIVTVAGRIQSIRGQGKLMFYDIRGDGVQLQLMTSLKDYAGGADSFDEINRTIKRGDIIG 189

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE-SIRFKYRF 130
             G               TGQ+ L   ++++LS     LP  V G         R++ R+
Sbjct: 190 ARGYAGKSK---------TGQLSLFPIEVQLLSPCLHMLPKAVGGHGGMTNMETRYRQRY 240

Query: 131 LDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLV-PSRV 186
           LDL  ++  + +  +R ++IN +R      +F+E  TP++    P GA  R F+   + +
Sbjct: 241 LDLIVNSDVRTVFERRAQVINYIRKYFNDRHFLEVETPMMNMI-PGGAVARPFVTFHNDL 299

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           +   F  +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +   ++ + 
Sbjct: 300 SLEMFMRI--APELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCESYEAYADY 356

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS 271
           +D+++  E +L G+ +E + G  + 
Sbjct: 357 NDLMDMTEEMLSGMVKEITGGYKIK 381



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   G+DR+ M L    N++EV LFP
Sbjct: 541 ALEHGLPPTGGWGLGVDRLTMFLSNKNNIKEVLLFP 576


>gi|331699832|ref|YP_004336071.1| Lysyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326954521|gb|AEA28218.1| Lysyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 500

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 21/261 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-G 75
            G  V ++G V   R  G + F  +R+  G T++ A    A  ++ +   ++W   +D G
Sbjct: 61  TGDKVAVAGRVVFQRNTGKLCFATLREGDG-TELQAMLSLA--DVGEESLAQWKAMVDLG 117

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++    E I +    G++ +SA    +L+ A   PLPV   RE  E  R + R++DL  
Sbjct: 118 DLVLVEGEVITSR--RGELSVSADTWRMLAKAVR-PLPV-AHRELSEETRVRQRYVDLIM 173

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
               + +V+ R+ ++ ++R       +IE  TP+L        AR F+  S       Y 
Sbjct: 174 RPRAREMVRARSTVLRTLRRVFEERGYIEVETPMLQVLHGGATARPFVTRSNALSQDLY- 232

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN-T 252
           L  AP+ Y +  +  G +R F++   FR+E   S   P EF  L+   ++   DD+   T
Sbjct: 233 LRIAPELYLKRAVVGGIERVFELNRVFRNEGIDSTHSP-EFAMLEAYQAYATYDDMAELT 291

Query: 253 MENVL---RGVFEEFSNGNTV 270
            E +L   R VF     G+TV
Sbjct: 292 RELILESARAVF-----GSTV 307



 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           RA + GMPP GG+  G+DR++M L G   +RE  LFP+ ++
Sbjct: 460 RAMEYGMPPTGGMGMGVDRLLMTLTGL-GIRETILFPLVRS 499


>gi|92115113|ref|YP_575041.1| lysyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|122990398|sp|Q1QT66|SYK_CHRSD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|91798203|gb|ABE60342.1| lysyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 502

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 15/175 (8%)

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFL 181
           R++ R++DL  +   + + + R+R+I+ +R  ++   F+E  TP+L    P GA  R F+
Sbjct: 162 RYRQRYVDLIMNPESRRVFEVRSRVISGIRRFLVERGFMEVETPMLQ-QIPGGATARPFV 220

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  L+   
Sbjct: 221 THHNALDIDMY-LRVAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMLEFYW 278

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           ++ +  D+L+  E ++R V  E     TV            F R+    +I  YG
Sbjct: 279 AYADYRDLLDLTEAMIRDVAHEVLGTTTVEYQGARYELGEPFQRLTLRQSILEYG 333



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 4/94 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV--VENRF--GGLYRAFQCGMPPH 536
           +++    G E+A+G    + +E   + F+     K+   +E  +      RA + GMPP 
Sbjct: 409 RFEFFVGGRELANGFSELNDAEDQAERFAAQAAEKDAGDLEAMYYDADYVRALEYGMPPT 468

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G   GIDR+VMLL  + ++R+V LFP  +   D
Sbjct: 469 AGEGIGIDRLVMLLTDSPSIRDVLLFPAMRPSAD 502


>gi|322695943|gb|EFY87743.1| putative lysyl-tRNA synthetase (lysine--tRNA ligase) [Metarhizium
           acridum CQMa 102]
          Length = 616

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 18/249 (7%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFE----IAK-SVRSEWVLCID 74
           V LSG V   R  G  +IFLDI + +   Q++ N +    E    I K S+    +   D
Sbjct: 124 VTLSGRVRSKRVVGKSLIFLDIVNEFQKVQIMVNKNKCVSEKHGRIQKFSLFKHLIQVGD 183

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
            + ++ +A    A   T Q   + Q  E+LS + E++P     E+      R   R +D+
Sbjct: 184 HISVTGNATRTKAGEPTLQ---AIQLPELLSPSMEQIP-----EKLNDPKTRMADRHVDM 235

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSF 191
             +    ++++ R  I   MR    ++ F+E  TPIL  ++    AR F+  +   +   
Sbjct: 236 LVNREVVDVLRLRAEITKYMRDHFHSKRFLEFQTPILAENAGGAVARPFVTQATEFRKKD 295

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
            AL  AP+ + + L+  G DR F+I P FR+E   +   P EF   +   ++    D++ 
Sbjct: 296 LALRIAPELWLKRLVVGGVDRVFEIGPAFRNEGVDATHNP-EFTMCEFYSAYTNLADLIK 354

Query: 252 TMENVLRGV 260
             E +L G+
Sbjct: 355 ETEELLHGL 363


>gi|224475661|ref|YP_002633267.1| lysyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222420268|emb|CAL27082.1| lysyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 497

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 113/249 (45%), Gaps = 19/249 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74
            + V ++G +   R  G   F  I+D  G  Q+    D      F I K      ++ I+
Sbjct: 60  AAHVAIAGRLMTKRGKGKAGFAHIQDLSGQIQIYVRKDQVGEEQFAIWKMADLGDIVGIE 119

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
           G++   +         TG++ + A+   +LS +   LP    G ++  +  R++ R+LDL
Sbjct: 120 GVMFKTN---------TGELSVKAKSFTLLSKSLRPLPDKFHGLQDVEQ--RYRQRYLDL 168

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
                  +  + R++II  MR  + ++ F+E  TP++   +    AR F+        + 
Sbjct: 169 ITNQESTQTFINRSKIIQEMRNYLNSKGFLEVETPMMHQIAGGAAARPFVTHHNALDATL 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++
Sbjct: 229 Y-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADFHDIMD 286

Query: 252 TMENVLRGV 260
             E  +R +
Sbjct: 287 LTEGTIRHI 295



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFP 492


>gi|313678487|ref|YP_004056227.1| asparagine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950370|gb|ADR24965.1| asparagine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 452

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 112/255 (43%), Gaps = 28/255 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG-LV 77
           V L GWV   R +  I FL I D   +   QV    D+  F++   +R+   + + G +V
Sbjct: 21  VTLRGWVVSNRGNNKIRFLTISDGSTVENIQVTFKGDNFDFKLLDEIRTGAAIEVYGTIV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           ++  A+          +E+ A K  +L   +    P+  +    E++R       LR  T
Sbjct: 81  LTPKAKQ--------PLEVLASKFVLLKNVDH-DFPIQKQEINLETLR---EIPHLRHRT 128

Query: 138 LHKNIVKRTRIINSMRC----RMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQ---- 188
              N++K   +I S       +  AEN F+  S PI+T++  EGA +    +  N+    
Sbjct: 129 ---NLLKCVMLIRSTLALEIHKFFAENNFLNFSAPIITSNDGEGAGEQFYVNDGNKEQPF 185

Query: 189 -GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
            GS  A      Q      A GF++ +  AP FR E   + +   EF+ ++ E++F +  
Sbjct: 186 FGSNNATLGVTGQLHAESYAVGFEKVYTFAPTFRAEHSNTKKHAAEFWMIEPEIAFYDLK 245

Query: 248 DILNTMENVLRGVFE 262
            ++N    +L+ V +
Sbjct: 246 KVINFATKLLKNVIK 260


>gi|309366534|emb|CAP21280.2| CBR-KARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 598

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 110/243 (45%), Gaps = 10/243 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G +H  R  G  ++F DI       Q++AN      ++      + +   D +  +
Sbjct: 132 VSVAGRIHSKRESGSKLVFYDIHGEGTHIQIMANARFHTGDVDFVTLHDRIKRGDIVGFT 191

Query: 80  RSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT- 137
             A    A    G++ L  +++ ++      LP   FG ++  + +RF+ R+LDL  +  
Sbjct: 192 GQATRTKA----GELSLIPKEVLQLTPCLHMLPHSHFGLKD--KELRFRKRYLDLILNPR 245

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           +  N V R++II  +R  +    F+E  TPI+   +        +    +      L  A
Sbjct: 246 VKDNFVIRSKIITFLRRYLDNLGFLEVETPIMNQIAGGATAKPFITHHNDLDMNLFLRVA 305

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y ++L+  G DR +++   FR+E       P EF   +  M++ + +D++   E++L
Sbjct: 306 PELYHKMLVVGGIDRVYEVGRLFRNEGIDLTHNP-EFTTCEFYMAYADYEDVIQLTEDLL 364

Query: 258 RGV 260
             +
Sbjct: 365 SSM 367



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M+L    N++EV LFP
Sbjct: 543 ALEYGLPPTGGWGMGIDRLSMILTDNNNIKEVLLFP 578


>gi|260771152|ref|ZP_05880079.1| lysyl-tRNA synthetase (class II) [Vibrio furnissii CIP 102972]
 gi|260613749|gb|EEX38941.1| lysyl-tRNA synthetase (class II) [Vibrio furnissii CIP 102972]
 gi|315179242|gb|ADT86156.1| lysyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 510

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 102/215 (47%), Gaps = 16/215 (7%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIIN 150
           G + ++ ++ E+L+ A   PLP        + +R++ R++DL   +   K  + R++++ 
Sbjct: 133 GDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRKAFIIRSKLVA 191

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  M ++ ++E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 192 AIRNFMSSKGYLEVETPMMHVI-PGGASARPFITHHNALDIDMY-LRIAPELYLKRLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++   ++ +  D+++  E +L  V        
Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYQAYADYKDLMDLTEEMLSTVAMNVLGST 308

Query: 269 TV---------SNNFLRICYDDAIRRYGTDKPDLR 294
           ++            + R+   DAI+ Y  D  +++
Sbjct: 309 SMPYGDEMVEFGGQYARMSMLDAIKHYNPDHAEIQ 343



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ ML   +  +R+V LFP
Sbjct: 469 ALEHGLPPTAGQGIGIDRLAMLFTNSHTIRDVILFP 504


>gi|218291276|ref|ZP_03495252.1| Aspartyl-tRNA synthetase-like protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218238824|gb|EED06036.1| Aspartyl-tRNA synthetase-like protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 132

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 43/76 (56%)

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
           E  + +F     AF+ G  PH GIA G+D  +ML  GAK++ +V  FP   +  D ++G+
Sbjct: 50  EEAQEKFVFFLNAFEYGTSPHVGIAFGLDSFIMLFTGAKSMCDVLAFPKMASGTDFMVGA 109

Query: 576 PSTVSVEQLRELGLRI 591
           P  VS  QL  L LR+
Sbjct: 110 PIEVSEAQLEVLDLRV 125


>gi|67900984|ref|XP_680748.1| hypothetical protein AN7479.2 [Aspergillus nidulans FGSC A4]
 gi|40742869|gb|EAA62059.1| hypothetical protein AN7479.2 [Aspergillus nidulans FGSC A4]
 gi|259483785|tpe|CBF79459.1| TPA: cytoplasmic asparaginyl-tRNA synthetase, putative
           (AFU_orthologue; AFUA_2G05650) [Aspergillus nidulans
           FGSC A4]
          Length = 574

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 25/283 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VHR+R    +IFL + D YG  Q V   D      A ++  E  + + G +
Sbjct: 149 GTRVRVLGRVHRLRSQKDMIFLTLSDGYGYLQCVLTGDLVKTYDAMTLTLETSIALHGEM 208

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLR 134
            +   +    N      EL      I+  A   +E           P+++ +  R L LR
Sbjct: 209 RAVPPKQHAPN----NRELHVDFYTIIGRAAGDKEAITTRVAHDSDPQTL-YNNRHLVLR 263

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +T    +  R   + + R         E + P +  +  EG           + ++  L
Sbjct: 264 GETASSVMKVRAATLKAFRQTFDELRMTEVTPPAMVQTQVEGGSTLFKFDYYGEDAY--L 321

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y +  + S  D  F + P FR E   + R   E+  ++ E+ F+E  D+L+ +E
Sbjct: 322 TQSSQLYLETCIPSLGD-VFCVCPSFRAEKSLTRRHLSEYTHIESELDFIEFTDLLDHLE 380

Query: 255 NVLRGVFE-------------EFSNG-NTVSNNFLRICYDDAI 283
            V+  V E             + + G    S  FLR+ Y DAI
Sbjct: 381 AVICRVLEIVLADPVAKPIIAQLNPGFQMPSRPFLRMKYSDAI 423


>gi|257092653|ref|YP_003166294.1| lysyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257045177|gb|ACV34365.1| lysyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 504

 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 127/295 (43%), Gaps = 26/295 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y   S  +L  S V   V+++G +   R  G   F+ ++D  G  QV  + D    +   
Sbjct: 54  YDVRSREELAASPVE--VKVAGRIMLKRVMGKASFITLQDLSGRIQVYVSRDHLGEDDYA 111

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPE 122
             +  W L   G ++      +     T   EL+ + +EI  +A+ L PLP        +
Sbjct: 112 GFK-RWDL---GDIVG----AVGTLFRTKTGELTVECLEIRLLAKSLRPLPEKFHGLTDQ 163

Query: 123 SIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RD 179
             +++ R++DL  +   +     R+RI+ S+R  M+   F+E  TP++    P GA  R 
Sbjct: 164 EQKYRMRYVDLITNEQSRFTFAVRSRIVQSIRSFMVHHGFLEVETPMMH-PIPGGATARP 222

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           + L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++ 
Sbjct: 223 FATHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEF 280

Query: 240 EMSFVEQDDILNTMENVLRG---------VFEEFSNGNTVSNNFLRICYDDAIRR 285
             ++ E   +++  E +LR           FE        +  F R+   DAIR+
Sbjct: 281 YEAYTEYRQLMDFTEGLLRHSAREALGAEAFEYQGRRLDFAKPFARLTISDAIRQ 335



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMP 534
           A +++L   G EIA+G    +  E     F     +KE  +     +   Y RA + G+P
Sbjct: 411 AERFELFIAGREIANGFSELNDPEDQAARFLEQAKAKEAGDEEAMYYDADYVRALEYGLP 470

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG   GIDR+VMLL  + N+R+V LFP
Sbjct: 471 PTGGCGIGIDRLVMLLTDSPNIRDVILFP 499


>gi|182683632|ref|YP_001835379.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|238691143|sp|B2IN95|SYK_STRPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|182628966|gb|ACB89914.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
          Length = 496

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 112/251 (44%), Gaps = 19/251 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D      ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLR 258
           DI++  E +++
Sbjct: 283 DIMDLTEGIIQ 293



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|228995467|ref|ZP_04155137.1| Lysyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228764328|gb|EEM13205.1| Lysyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 497

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 129/296 (43%), Gaps = 37/296 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + + G  V ++G +   R  G   F  I+D +G  Q+    D+     +E+  +     +
Sbjct: 56  LEEKGISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEQYELFNTADLGDL 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYR 129
           + I+G V   +          G++ + A    +L+ A   LP    G ++  +  R++ R
Sbjct: 116 VGIEGKVFKTNV---------GELSVKATGFTLLTKALRPLPDKYHGLKDVEQ--RYRQR 164

Query: 130 FLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
           +LDL      R+T     V R++II  MR  +    ++E  TP++ A +    AR F+  
Sbjct: 165 YLDLITSMESRETF----VTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITH 220

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++
Sbjct: 221 HNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAY 278

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY-GTD 289
            +  DI+   EN++  + +      T+            + R+   DAI++Y G D
Sbjct: 279 ADYKDIMKLTENMIAHIAKRVLGTTTIQYGEQEINLEPEWTRLHMVDAIKQYSGAD 334



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFP 492


>gi|94270667|ref|ZP_01291795.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
 gi|93450711|gb|EAT01789.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
          Length = 495

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 115/274 (41%), Gaps = 19/274 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +  +R  G   FL ++D  G  QV    D    EI +   + +     G + + S 
Sbjct: 60  VAGRIMALRRFGKAAFLHLQDSSGRIQVHVKRD----EIGQQAYATFKKFDVGDIAAFSG 115

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-----RDT 137
                   TG++ + A  +++L+ +   PLP           R++ R++DL      RDT
Sbjct: 116 PLFRTK--TGEVTIQALSVKLLTKSLR-PLPEKFHGLTDIETRYRQRYVDLMVNPEVRDT 172

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
             +    R  II  +R  +    F+E  TP++ A +    A+ F           Y L  
Sbjct: 173 FRR----RVEIIRLVRDFLTNRGFLEVETPMMQAIAGGATAKPFKTHHNALGLDLY-LRI 227

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R F+I   FR+E   S R   EF  L+   ++   D+++   E +
Sbjct: 228 APELYLKRLLVGGFERVFEINRNFRNEG-LSTRHNPEFTMLEFYQAYATYDELMELAEEM 286

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           L  V  E      +S     +      RRY  D+
Sbjct: 287 LSWVAMEVCGTMQISYQGQEVDLAPPWRRYTMDE 320



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+ MLL  A ++R+V LFP
Sbjct: 451 RALEYGMPPAAGCGVGIDRLTMLLTDAPSIRDVILFP 487


>gi|303242487|ref|ZP_07328967.1| lysyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302589955|gb|EFL59723.1| lysyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 506

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 19/252 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           GS V ++G +   R  G   F D+RD     Q+    D    EI   V  ++     G +
Sbjct: 68  GSMVSIAGRLMSKRGMGKASFCDVRDRDSKIQIYIKVD----EIGAEVYEDFKKFDIGDI 123

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---- 133
           +    E    +   G+I L A  I +L+ + + PLP          +R++ R++DL    
Sbjct: 124 VGVKGEVFRTH--KGEISLKANNIILLAKSLQ-PLPEKWHGLTNVDLRYRQRYVDLIVNP 180

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             RDT     + R+ II ++R  +    F+E  TP+L T      A+ F+          
Sbjct: 181 EVRDTF----IVRSMIIKAIRKFLDERGFLEVDTPLLNTIPGGAAAKPFITHHNTLDIDM 236

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  G +R +++   FR+E       P EF  +++  ++ +   +++
Sbjct: 237 Y-LRIAPELYLKRLIVGGLERVYEMGRMFRNEGMSVKHNP-EFTLMEVYEAYTDYKGMMD 294

Query: 252 TMENVLRGVFEE 263
             E ++  V +E
Sbjct: 295 LSEQLISTVAKE 306



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR++MLL  + ++R++ LFP
Sbjct: 465 ALEYGMPPTGGLGIGIDRLIMLLTDSYSIRDILLFP 500


>gi|320528945|ref|ZP_08030037.1| lysyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320138575|gb|EFW30465.1| lysyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 503

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 34/260 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW-------V 70
           G  V ++G +  +R HG   F  + D  G  Q+    D       K  + E+       +
Sbjct: 64  GGEVCIAGRLMAIRGHGKASFSTLNDRTGNIQIYFKQDVLG---EKKYKEEFKRLDIGDI 120

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYR 129
           + I G+V              G++ +  +  ++LS +   LP    G ++     R++ R
Sbjct: 121 IGIRGVVFKTR---------RGEVTVRVEDFDLLSKSLRPLPEKFHGLKDV--DTRYRQR 169

Query: 130 FLDLR-----RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP 183
           +LDL      RDT  K    R +II S+R  +   +F+E  TP+L T +    AR F+  
Sbjct: 170 YLDLMVNYEVRDTFRK----RAKIIRSIRSYLDERDFLEVETPVLSTIAGGAAARPFITH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  A +   + L+  G DR +++   FR+E       P EF  +++  +F
Sbjct: 226 HNALDIDLY-LRIATELSLKRLIVGGLDRVYEMGRIFRNEGMDVRHNP-EFTSIEIYQAF 283

Query: 244 VEQDDILNTMENVLRGVFEE 263
            +  D++   E ++R   E+
Sbjct: 284 GDYRDLMEITEGIVRRTAED 303



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 29/43 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + G+PP GG+  GIDR+VMLL  + ++R+V LFP  +   +
Sbjct: 461 ALEYGLPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPTMKPLAE 503


>gi|291530007|emb|CBK95592.1| Lysyl-tRNA synthetase (class II) [Eubacterium siraeum 70/3]
          Length = 649

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 124/293 (42%), Gaps = 36/293 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW- 69
           +L   DV    R++ W    R  G   F+DIRD  G  QV    D    +  K  + +W 
Sbjct: 62  ELEEKDVMIAGRITSW----RDMGKANFIDIRDDSGRMQVYVRIDDIGEDNFKEFK-KWD 116

Query: 70  ---VLCIDGLVMS--RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
              ++ + G V    R   +++AN I    +      E             G ++  E  
Sbjct: 117 LGDIVGVSGFVFKTRRGEISVHANSIKLLSKSLLPLPEKWH----------GLKDKEE-- 164

Query: 125 RFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV 182
           R++ R+LDL  +  +    VKR+ I+  +R  + ++ ++E  TP+L T      AR F+ 
Sbjct: 165 RYRKRYLDLIANPEIKDTFVKRSMILREIRSFLDSKGYLEVDTPVLHTLEIGAAARPFVT 224

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y L    + Y + L+  GFDR +++   FR+E   +   P EF  ++M  +
Sbjct: 225 HHNALDIDMY-LRIETELYLKRLIVGGFDRVYEVGRIFRNEGMDATHNP-EFTSIEMYQA 282

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286
           + +   +++ +E + R V  +    +TV            + R+   +A++ Y
Sbjct: 283 YTDYYGMMDLIEEMYRTVALKVCGTDTVPYQGNEIEIGKPWKRVTMKEAVKEY 335



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 8/58 (13%)

Query: 514 SKEVVENRFGG--------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +K+V+E R  G           A + G+PP GG+  G+DR VMLL  + ++R+V LFP
Sbjct: 439 TKQVMEKRKQGANAQIDEDFLTALEYGLPPTGGLGMGLDRFVMLLTDSASIRDVLLFP 496


>gi|83645055|ref|YP_433490.1| asparaginyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|123767469|sp|Q2SJV9|SYN_HAHCH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|83633098|gb|ABC29065.1| asparaginyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 465

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 125/319 (39%), Gaps = 63/319 (19%)

Query: 15  SDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +++GS V + GWV   R    G+ F+ + D             +CF+  ++V ++ +   
Sbjct: 14  AEIGSEVTVKGWVRSRRDSKAGVSFIHVHD------------GSCFDAIQAVVAKELPNY 61

Query: 74  DGLVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-ESIRFKYR 129
           D  V+  +  T  + I+TG +  S    Q  EI + + EL   V     YP    R  + 
Sbjct: 62  DADVLRLT--TGCSLIVTGTLVESPGQGQSCEIQATSVELVGLVDDPETYPVAKKRHTFE 119

Query: 130 FL----DLRRDTLHKNIVKRTRIINSMRCR--MIAENFIECSTPILTASSPEGARDFLVP 183
           FL     LR  T     V R R   S         + F   +TPILTAS  EGA +    
Sbjct: 120 FLRGVAHLRPRTNAFGAVTRVRTTLSHAVHHFFYEQGFQWINTPILTASDCEGAGELFRV 179

Query: 184 SRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPR 226
           S ++  +          Y +        L  SG            + +   P FR E+  
Sbjct: 180 STLDMANLPKTDSGKIDYSKDFFGKETFLTVSGQLNVEAYCLAMSKVYTFGPTFRAENSN 239

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF----EEFSNG--------------- 267
           + R   EF+ ++ E++F + +D  +  E  L+ +F    +E S+                
Sbjct: 240 TSRHLAEFWMIEPEIAFADLNDDADLAERFLKHMFKVVLDERSDDMAFFAERINPDVVSR 299

Query: 268 --NTVSNNFLRICYDDAIR 284
             N V   F+RI Y +AI+
Sbjct: 300 LENMVDKEFVRIDYSEAIK 318


>gi|323497778|ref|ZP_08102792.1| lysyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323317125|gb|EGA70122.1| lysyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 505

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 106/216 (49%), Gaps = 18/216 (8%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRII 149
           G + ++ ++ E+L+ A   PLP        + +R++ R++DL   +D+    I+ R++++
Sbjct: 128 GDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNQDSREAFII-RSKLV 185

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           +S+R  M ++ ++E  TP++    P GA  R F+          Y L  AP+ Y + L+ 
Sbjct: 186 SSIRNFMSSKGYLEVETPMMHVI-PGGATARPFITHHNALDIDMY-LRVAPELYLKRLVV 243

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            GFDR F+I   FR+E   S R   EF  ++   ++ +  D+++  E +L  V  +    
Sbjct: 244 GGFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTVAMDVLGS 302

Query: 268 NTV---------SNNFLRICYDDAIRRYGTDKPDLR 294
            ++            + R+   +AI+ Y  D  +++
Sbjct: 303 TSMPYGEETVEFGGTYARMSMFEAIKHYNPDHAEIQ 338



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ ML      +R+V LFP
Sbjct: 464 ALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFP 499


>gi|332376007|gb|AEE63144.1| unknown [Dendroctonus ponderosae]
          Length = 590

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 120/250 (48%), Gaps = 30/250 (12%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCID 74
           + ++G VH +R  G  +IF D+R      Q++A       +S   E +  ++   ++ + 
Sbjct: 121 LSVAGRVHAIRASGPKLIFYDLRGEGTKLQIMATAKQYEKESEFEEDSDKIKRGDIIGVR 180

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G V +R+ +        G++ +   K+ +LS     LP   +G ++  +  RF+ R+LDL
Sbjct: 181 G-VPTRTKK--------GELSVIPLKLTLLSPCLHMLPHLYYGLKD--KETRFRQRYLDL 229

Query: 134 RRDTLHKNI----VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVN 187
               L+ NI      R +II  +R     + F+E  TP++   +    A+ F+   + +N
Sbjct: 230 ---ILNNNIRFIFQTRAKIIAYIRKFFDEQGFLEIETPMMNMIAGGATAKPFVTHHNDLN 286

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
              F  +  AP+ Y ++L+  GFDR ++I   FR+E       P EF   +  M++ +  
Sbjct: 287 MDLFMRI--APELYHKMLVVGGFDRVYEIGKQFRNEGIDLTHNP-EFTTCEFYMAYADYQ 343

Query: 248 DILNTMENVL 257
           D++   E++L
Sbjct: 344 DLIAITESLL 353



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L    N++EV LFP
Sbjct: 531 ALEYGLPPTGGWGLGIDRLTMFLTDNNNIKEVLLFP 566


>gi|328950625|ref|YP_004367960.1| Lysyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328450949|gb|AEB11850.1| Lysyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 499

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 132/297 (44%), Gaps = 26/297 (8%)

Query: 2   HRY-RTHSCGDLGVSDVGS--------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           +RY +TH    +  +  G+         VRL+G +  +R  G + F  + D  G  Q+  
Sbjct: 28  YRYPKTHDAAQILEAHAGAGPGEEWPEVVRLAGRLVALRRMGKVTFAHLLDGSGRIQLYF 87

Query: 53  NP-DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
           N  ++  + + K +    ++ ++G V +           TG+I +   +  +L V    P
Sbjct: 88  NKQETPDYNLLKKLDIGDIIGVEGTVFTTK---------TGEITVRVTRWTLL-VKSLRP 137

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL- 169
           LP        + +R++ R+LDL  +   + + K R +I+  +R  +    F+E  TP++ 
Sbjct: 138 LPDKWHGIRDKEVRYRQRYLDLIVNPEVREVFKKRAQIVRFVRRFLEDRGFLEVETPVIV 197

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            TA   E AR F        G+ + L  A +   + L+  GF++ F+I   FR+E   + 
Sbjct: 198 PTAGGTE-ARPFRTYHNA-LGTEFELRIALELPLKRLLVGGFEKVFEIGRVFRNEGIDAQ 255

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             P EF  L++  ++ + +D+   +E++L  + +      TV      I +    +R
Sbjct: 256 HNP-EFTMLELYWAYADYNDVAQLVEDLLSSLAKAIHGSYTVPYQGREIDFTPPFKR 311



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A +  MPP GG+  GIDR+ M+L    ++R+V LFP+
Sbjct: 446 ALEHAMPPAGGLGIGIDRLTMILTDMPSIRDVILFPL 482


>gi|323491500|ref|ZP_08096682.1| lysyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323314254|gb|EGA67336.1| lysyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 505

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 127/271 (46%), Gaps = 27/271 (9%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWV-LCIDGLVMSRSAETINANIITGQIEL 96
           FL I++  G  Q  A  D     + K ++ ++  L I  ++  + A   +     G + +
Sbjct: 81  FLAIQETSGRIQAYAAKD-----VQKELKEKYQGLDIGDIIGVKGALHKSGK---GDLYV 132

Query: 97  SAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRC 154
           + +  E+L+ A   PLP        + +R++ R++DL   +D+    I+ R+++++++R 
Sbjct: 133 NMESYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNQDSREAFII-RSKLVSAIRN 190

Query: 155 RMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
            M ++ ++E  TP++    P GA  R F+          Y L  AP+ Y + L+  GFDR
Sbjct: 191 FMSSKGYLEVETPMMHVI-PGGATARPFITHHNALDIDMY-LRVAPELYLKRLVVGGFDR 248

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV-- 270
            F+I   FR+E   S R   EF  ++   ++ +  D+++  E +L  V  E     ++  
Sbjct: 249 VFEINRNFRNEG-LSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTVAMEVLGSTSMPY 307

Query: 271 -------SNNFLRICYDDAIRRYGTDKPDLR 294
                     + R+   +AI+ Y  D  +++
Sbjct: 308 GDETVEFGGTYARMSMFEAIKHYNPDHAEIQ 338



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ ML      +R+V LFP
Sbjct: 464 ALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFP 499


>gi|332292279|ref|YP_004430888.1| lysyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170365|gb|AEE19620.1| lysyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 564

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 116/263 (44%), Gaps = 14/263 (5%)

Query: 6   THSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           THS    +G    G  V ++G + R +  G   F +I+D  G  Q+  N D  C    KS
Sbjct: 33  THSSKQAIGNYKEGEKVVMAGRLMRKKIQGSASFGEIQDGEGRIQLYFNRDEICPGEDKS 92

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP-------VFG 116
             +E    +  L      E        G+I +S     +LS A + LPLP        + 
Sbjct: 93  HYNEVFKKLLDLGDFIGVEGTLFTTQVGEITVSLTGFTLLSKALKPLPLPKTDAEGNTYD 152

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           E   PE +R++ R+ DL  +   K + VKRT++ N+MR       + E  TPIL   +  
Sbjct: 153 EFIDPE-MRYRQRYADLAVNPHVKEVFVKRTKLFNAMRNFFNNAGYFEVETPILQPIAGG 211

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+          Y +  A + Y + L+  GF+  ++ +  FR+E       P EF
Sbjct: 212 AAARPFVTHHNSLDMPLY-MRIANELYLKRLIVGGFEGVYEFSKNFRNEGMDRTHNP-EF 269

Query: 235 YQLDMEMSFVEQDDILNTMENVL 257
             +++ +++ + + ++   E +L
Sbjct: 270 TAMEIYVAYKDYNWMMEFCEQLL 292



 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           R+ + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 456 RSLEYGMPPTSGMGIGMDRLIMFLTNNQSIQEVLFFP 492


>gi|229829706|ref|ZP_04455775.1| hypothetical protein GCWU000342_01803 [Shuttleworthia satelles DSM
           14600]
 gi|229791695|gb|EEP27809.1| hypothetical protein GCWU000342_01803 [Shuttleworthia satelles DSM
           14600]
          Length = 648

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/286 (22%), Positives = 126/286 (44%), Gaps = 36/286 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCID 74
           G  V+++G +   R  G   F +IRD  G  Q+    D      + + K      +L + 
Sbjct: 55  GKEVKIAGRMMFKRVMGKASFANIRDLKGDMQIYVTRDDLGQEDYALFKKYDVGDILGVV 114

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G+V              G+I + A ++ +LS + + PLP           R++ R++DL 
Sbjct: 115 GVVFRTRM---------GEISVHASQVTLLSKSLQ-PLPEKFHGLTDTDTRYRQRYVDLI 164

Query: 135 RD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +  +    VKR++II  +R  +   +F+E  TP+L +++   A      +R  +  + A
Sbjct: 165 MNPEVKDTFVKRSQIIKEIRNFLDGRDFMEVETPMLVSNAGGAA------ARPFESHYNA 218

Query: 194 LPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           L +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + +
Sbjct: 219 LDEDVKLRISLELYLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYN 277

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
            ++   E++ R + E+      ++           F R+   DAIR
Sbjct: 278 GMMELTESMFRYLAEKVCGSTRITYQGTEIDLGKPFCRLTMIDAIR 323



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP
Sbjct: 452 AMEIGMPPTGGIGYGIDRLVMLLTDSPAIRDVLLFP 487


>gi|333029319|ref|ZP_08457380.1| Asparaginyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332739916|gb|EGJ70398.1| Asparaginyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 467

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 107/276 (38%), Gaps = 34/276 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L   D G+ V + GWV   R    + F+ + D   I  V    D   F  E+ 
Sbjct: 6   RTRIVDLLKREDFGAMVNVKGWVRTRRGSKKVNFIALNDGSTINNVQLVVDLGEFDEELL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121
           K + +   + ++G++     +  NA       E+  ++IE+L V +   PL   G     
Sbjct: 66  KKITTGACISVNGVLTESMGKGQNA-------EIQVKEIEVLGVCDSSFPLQKKGH---- 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARD 179
            S+ F      LR  T     V R R  +  ++        F    TP++T S  EGA +
Sbjct: 115 -SLEFLREIAHLRPRTNTFGAVFRIRHNMAYAIHKYFHDRGFFYFHTPLITGSDAEGAGE 173

Query: 180 FL---------VPSRVNQGSFY--------ALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
                      VP   N    Y        A      Q +  L A+     +   P FR 
Sbjct: 174 MFQVTTLDLNNVPKDENGKINYKEDFFGKEANLTVSGQLEGELAATALGAIYTFGPTFRA 233

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           E+  + R   EF+ ++ E++F + +D +N  E+ ++
Sbjct: 234 ENSNTPRHLAEFWMIEPEVAFNDNNDNMNLAEDFIK 269


>gi|322387891|ref|ZP_08061498.1| lysine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321141164|gb|EFX36662.1| lysine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 496

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 19/244 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    D+     +EI K       L ++G VM 
Sbjct: 65  IAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDFLGVEGEVMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A  I  LS A   PLP  F      E+I ++ R+LDL   R+
Sbjct: 125 TD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKRYLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     Q     L  
Sbjct: 174 SFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQDIMDLTEGI 291

Query: 257 LRGV 260
           ++ V
Sbjct: 292 IQHV 295



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|154334456|ref|XP_001563475.1| lysyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134060496|emb|CAM42043.1| putative lysyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 587

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 11/185 (5%)

Query: 91  TGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTR 147
           + +  L+A ++ +LS     LP   FG   + +  RF+ R+LDL   RD + K  ++R  
Sbjct: 180 SNEFSLNAVEVTLLSTCYHMLPDDYFGLSSFEQ--RFRQRYLDLIVNRDNI-KVFIQRAN 236

Query: 148 IINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLL 205
           II  +R      +F+E  TP+L   +    AR F+   + +NQ  F  +  AP+ Y + L
Sbjct: 237 IIKYIRKFFDERDFVEVETPVLNQIAGGAAARPFVTHHNDLNQTMFLRI--APELYLKEL 294

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           +  G DR +++   FR+E       P EF   +   ++++ +D +   E++L G+  E  
Sbjct: 295 VVGGMDRVYELGKQFRNESIDLTHNP-EFTSCEAYWAYMDYNDWMTATEDLLYGLAMELH 353

Query: 266 NGNTV 270
               V
Sbjct: 354 GSPIV 358



 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 24/40 (60%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   A +  +PP GG   GIDR+VM L    N++EV LFP
Sbjct: 521 GFIAALEHALPPTGGWGLGIDRLVMFLTSQSNIKEVLLFP 560


>gi|15236037|ref|NP_193462.1| NS1; asparagine-tRNA ligase [Arabidopsis thaliana]
 gi|55584148|sp|O48593|SYNO_ARATH RecName: Full=Asparaginyl-tRNA synthetase,
           chloroplastic/mitochondrial; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS; Flags:
           Precursor
 gi|19310458|gb|AAL84964.1| AT4g17300/dl4685w [Arabidopsis thaliana]
 gi|332658474|gb|AEE83874.1| asparaginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 567

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 110/273 (40%), Gaps = 46/273 (16%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRS 67
            D G+S VG  + + GWV  +R    + F++I D   ++  Q V   D+  ++  +S   
Sbjct: 101 ADEGLSRVGQSLNIMGWVRTLRSQSSVTFIEINDGSCLSNLQCVMTSDAEGYDQVES--- 157

Query: 68  EWVLCIDGLVMSRSAETINANIITGQ-----IELSAQKIEILSVAEELPLPVFGEREYPE 122
                  G +++ ++ ++   I+  Q     +EL  +KI ++   +    P+  +R   E
Sbjct: 158 -------GSILTGASVSVQGTIVASQGTKQKVELKVEKIIVVGECDS-SYPIQKKRVSRE 209

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD--- 179
            +R K   L  R +T       R  +  +         F+  ++PI+TAS  EGA +   
Sbjct: 210 FLRTKAH-LRPRTNTFGAVARVRNTLAYATHKFFQESGFVWVASPIITASDCEGAGEQFC 268

Query: 180 --FLVPS--RVNQGSFYALPQA--------------------PQQYKQLLMASGFDRYFQ 215
              L+PS       S  A+P+                       Q      A+     + 
Sbjct: 269 VTTLIPSSHENTDTSIDAIPKTKGGLIDWSQDFFGKPAFLTVSGQLNGETYATALSDVYT 328

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             P FR E+  + R   EF+ ++ E++F + DD
Sbjct: 329 FGPTFRAENSNTSRHLAEFWMIEPELAFADLDD 361


>gi|312215932|emb|CBX95884.1| hypothetical protein [Leptosphaeria maculans]
          Length = 448

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 92/180 (51%), Gaps = 9/180 (5%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           G++ + A+++ +L+     LP   FG ++  +  R + RFLDL   DT     + R++I+
Sbjct: 43  GELSIFAREVILLTPCLRMLPTEHFGYKD--QEQRHRNRFLDLIMNDTTRDTFITRSKIV 100

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLV-PSRVNQGSFYALPQAPQQYKQLLMA 207
             +R  +   +F+E  TP++   +    AR F    + ++   F  +  AP+ Y + L+ 
Sbjct: 101 KYVRKYLDERDFLEVQTPMMNKIAGGATARPFKTYHNELDMELFMRI--APELYLKQLVV 158

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            G ++ ++I   FR+E       P EF   +  M++ + +D+L+  E ++ G+ +E + G
Sbjct: 159 GGLEKVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYNDVLDMTEELVSGLVKEVTGG 217



 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +A + G+PP GG   GIDR+VM L    +++EV  FP  ++  +
Sbjct: 382 QALEYGLPPTGGWGMGIDRLVMFLTDHYSIKEVLTFPFMKDVVE 425


>gi|290994146|ref|XP_002679693.1| lysyl-tRNA synthase [Naegleria gruberi]
 gi|284093311|gb|EFC46949.1| lysyl-tRNA synthase [Naegleria gruberi]
          Length = 551

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 108/231 (46%), Gaps = 27/231 (11%)

Query: 92  GQIELSAQKIEILS-VAEELPLPV-FGEREYPESI--RFKYRFLDL--RRDTLHKNIVKR 145
           G++ +  ++I +LS    +LP  V + E    + I  RF+YR+LDL    + L+   + R
Sbjct: 167 GELSIIPKQITLLSPCLHQLPHKVSYSEGTSLDDIEKRFRYRYLDLLTNHEELYNIFLIR 226

Query: 146 TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF-YALPQAPQQYKQL 204
            + ++ +R     + F+E  TPIL+  S  GA      + +N       L  AP+ Y + 
Sbjct: 227 NKTMSFIRNFFTNKGFLEVETPILSEKSG-GANAKPFETHLNALDMDLKLRIAPELYLKQ 285

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           L+  G DR F+++  FR+E   S   P EF   +   +F + +++++  E   R +  E 
Sbjct: 286 LVIGGMDRVFELSKVFRNEGMDSTHNP-EFTSCEAYQAFADYNEMMDMTEEFFRQIVTEI 344

Query: 265 SNGNTV-----------SNNFLRICYDDAIRRYGTDK------PDLRNPII 298
            NG+ +           S  F R+ + D+I  +  +K      PD  N ++
Sbjct: 345 -NGSPILKVDDIGEIDFSKPFRRVSFIDSIEEHIKEKLPLPTDPDAVNKLL 394



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A + G+PP GG   G+DR+VMLL   K++R+V LFPM
Sbjct: 505 KALEYGLPPTGGWGIGVDRLVMLLSNQKSIRDVLLFPM 542


>gi|114565688|ref|YP_752842.1| lysyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122319141|sp|Q0B0N3|SYK_SYNWW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|114336623|gb|ABI67471.1| lysyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 493

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 111/250 (44%), Gaps = 19/250 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCID 74
           G  + ++G +   R HG   F ++ D  G  Q+    D      +E+ K +    +L I 
Sbjct: 52  GKTIAIAGRIMSKRRHGKAGFANLADLSGSIQLYFRQDDLGPEKYELYKKLDIGDILGIQ 111

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V              G+I +  + +  LS +   PLP          +R++ R++DL 
Sbjct: 112 GEVFRTQ---------KGEISIHVRDLYYLSKSL-TPLPEKWHGLKDVELRYRQRYVDLI 161

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSF 191
            +   K + VKR+RII  MR  +    F+E  TP++    P G  AR F+          
Sbjct: 162 VNPEVKEVFVKRSRIIKEMRNYLDDRGFLEVETPMMQ-PIPGGATARPFITHHNALDMEL 220

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  G ++ ++I   FR+E   +   P EF  L++  ++ + + ++ 
Sbjct: 221 Y-LRIAPELYLKRLIVGGLEKVYEINRNFRNEGISTRHNP-EFTMLEIYQAYGDYEVMMQ 278

Query: 252 TMENVLRGVF 261
             E+++  V 
Sbjct: 279 LCEDLISAVM 288



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VML+ G+ ++R+V LFP
Sbjct: 449 ALEYGMPPAGGMGIGIDRLVMLMTGSPSIRDVILFP 484


>gi|154295362|ref|XP_001548117.1| hypothetical protein BC1G_13262 [Botryotinia fuckeliana B05.10]
 gi|150844129|gb|EDN19322.1| hypothetical protein BC1G_13262 [Botryotinia fuckeliana B05.10]
          Length = 423

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 10/165 (6%)

Query: 101 IEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAE 159
           IEI  V      PV  + E PES R + R LDL   + +   +  R++I   +R  ++ +
Sbjct: 35  IEIPKVLTPSLAPVPQKLEDPES-RIRNRHLDLLVNNDVAATLRLRSKITQHIRDFLVQD 93

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSF----YALPQAPQQYKQLLMASGFDRYFQ 215
           +F+E  TPIL A    GA     P + N   F     AL  AP+ + + L+  G DR F+
Sbjct: 94  DFLEFQTPIL-ADQASGA--MAQPFKTNATEFPEKQLALRIAPELWLKRLVIGGLDRVFE 150

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           I P FR+E   +   P EF   +   ++ + +D+++  E ++ G+
Sbjct: 151 IGPAFRNEGLDAIHNP-EFTTCEFYKAYADLEDLISMTEKLISGL 194



 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 29/48 (60%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G  +A + G+PP GG   G+DR+VM L G+K + +V  F   +N  +L
Sbjct: 368 GYIQALEVGLPPTGGWGCGVDRLVMWLSGSKRISDVLPFGNLRNVVNL 415


>gi|223933785|ref|ZP_03625756.1| lysyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897553|gb|EEF63943.1| lysyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 496

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 110/250 (44%), Gaps = 17/250 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + ++G    ++G +   R  G   F  I+D  G  Q+    D      +EI K       
Sbjct: 56  LEELGQTAIIAGRIMTKRGKGKAGFAHIQDREGQIQIYVRKDDVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G V   +          G++ + A+K+  LS A   PLP           R++ R+
Sbjct: 116 IGVEGDVFKTNV---------GELSIHARKLTHLSKALR-PLPEKFHGLTDIETRYRKRY 165

Query: 131 LDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           LDL   R++  +  V R++II+ +R  +    F+E  TP+L   +   A    +     Q
Sbjct: 166 LDLITNRESFDR-FVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAARPFITHHNAQ 224

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
                L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  D
Sbjct: 225 NIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADYLD 283

Query: 249 ILNTMENVLR 258
           I++  E +++
Sbjct: 284 IMDLTEGIIQ 293



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L+ F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LERFEAQAKAKELGDDEATGVDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|319763832|ref|YP_004127769.1| lysyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|330823904|ref|YP_004387207.1| lysyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|317118393|gb|ADV00882.1| lysyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|329309276|gb|AEB83691.1| lysyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 515

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 16/217 (7%)

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
           AE       TG++ +   ++ +L+ +   P+P        + ++++ R++DL  D    +
Sbjct: 132 AEGTLMKTKTGELSVKVTRLRLLTKSLR-PMPDKFHGVADQEVKYRQRYVDLMTDEAARR 190

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
             V R++ I  +R  MI   F+E  TP+L    P GA  R F+      +   + L  AP
Sbjct: 191 RFVARSKAIGGIRAFMIEHGFLEVETPMLH-PIPGGANARPFVTHHNALEQEMF-LRIAP 248

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D+++  E ++R
Sbjct: 249 ELYLKRLIVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYRDLMDFTEELVR 307

Query: 259 GVFEEFSN-------GNTV--SNNFLRICYDDAIRRY 286
               + ++       G  V  S  F R+   +AI +Y
Sbjct: 308 DAALKATDTLQLTYGGRAVDLSQPFARLTIREAIYQY 344



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
           + NDL      +++L   G E  +G    + +E     F+    +K+  ++         
Sbjct: 412 RANDLRPEVTERFELYITGREFGNGFSELNDAEDQAARFNAQVAAKDSGDDEAMFFDHDF 471

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GMPP GG   GIDR++MLL  + ++R+V LFP
Sbjct: 472 VRALEYGMPPTGGCGIGIDRLMMLLTDSPSIRDVILFP 509


>gi|71984122|ref|NP_001021405.1| asparagiNyl tRNA Synthetase family member (nrs-1) [Caenorhabditis
           elegans]
 gi|2501037|sp|Q19722|SYNC_CAEEL RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|3876241|emb|CAA95808.1| C. elegans protein F22D6.3a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 545

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 124/306 (40%), Gaps = 31/306 (10%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-AKSVRSEWVLCIDGLVM 78
           V +  WVHR+R  G  ++FL +RD YG  Q V N D  C    A ++ +E  + + G++ 
Sbjct: 124 VSIKAWVHRLRRQGKSLMFLVLRDGYGFLQCVLN-DKLCQSYDAVTLSTETSVQVYGIIK 182

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           +      +        EL+    E++  A    +           +    R L +R +  
Sbjct: 183 ALP----DGKSAPDGHELTVDYWEVIGKAPAGGIDNVLNESAGVDVMLDNRHLVIRGENA 238

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
            + +  R     +MR    A  + E + P L  +  EG           + ++  L Q+ 
Sbjct: 239 SRILRIRAAATRAMRDHFFAAGYTEVAPPTLVQTQVEGGSTLFGLDYYGEPAY--LTQSS 296

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           Q Y +   A+  D Y  I+  +R E  R+ R   E+  ++ E +F+  D +++ +E ++ 
Sbjct: 297 QLYLETCNAALGDVYC-ISQSYRAEKSRTRRHLSEYQHVEAECAFITFDQLMDRIEALVC 355

Query: 259 GVFE------------EFSNG--NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              +            EF N      +  F R+ Y +AI      K D+RN      + E
Sbjct: 356 DTVDRLLADPVTKSLIEFVNPGYKAPARPFKRMPYKEAIE--WLQKNDVRN-----EMGE 408

Query: 305 HFVHSE 310
            FV+ E
Sbjct: 409 KFVYGE 414


>gi|304382273|ref|ZP_07364780.1| asparagine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304336630|gb|EFM02859.1| asparagine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 467

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/325 (21%), Positives = 128/325 (39%), Gaps = 61/325 (18%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L  +D G+ V + GWV   R    + F+ + D   I   Q+V N  +   +  
Sbjct: 6   RTKIVDVLKSTDFGATVNVRGWVRTHRSSKAVDFIALNDGSTIKNVQIVVNTSTTDEQTL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSV-AEELPLPVFGER-E 119
           + + +   L + G ++    +        GQ +E+  + I+I  +   + P+   G+  E
Sbjct: 66  RQITTGSCLSVTGTLVESQGK--------GQSVEIQCKDIKIYGLCGSDYPMQKKGQTFE 117

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           Y      +Y  L LR +T       R  +  ++        F    TPI+TAS  EGA  
Sbjct: 118 YMR----QYGHLRLRTNTFGAVFRIRHHMAIAIHQFFHDRGFFYFHTPIITASDAEGAGQ 173

Query: 180 FLVPSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPC 219
                +V   + Y L +  +                    Q +  L A+   + +   P 
Sbjct: 174 MF---QVTTQNLYDLKKDEKGKIKYDDDFFGKMTSLTVSGQLEGELGATSLGQIYTFGPT 230

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-- 267
           FR E+  + R   EF+ ++ E++F++ +D+++  E+ ++   +          EF N   
Sbjct: 231 FRAENSNTPRHLAEFWMIEPEVAFIDLNDLMDLEEDFIKYCVQWALDHCQDDLEFLNSMI 290

Query: 268 ---------NTVSNNFLRICYDDAI 283
                    + VS +F R+ Y + I
Sbjct: 291 DKTLLERLRSVVSGSFKRLTYTEGI 315


>gi|203284026|ref|YP_002221766.1| asparaginyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|201083469|gb|ACH93060.1| asparaginyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 461

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 105/267 (39%), Gaps = 23/267 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCID 74
             S + + GW+   R +G I FL+I D   I   Q V + ++  FE     + E+     
Sbjct: 14  TNSTITVKGWIRTKRSNGKISFLEINDGSNIKGIQAVIDENNPQFE-----KKEFKKLTT 68

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G  +S +   I +       E+      I+  +++   P+  +R   E +R +   L +R
Sbjct: 69  GASISLTGILILSPAKGQTYEIKTTNFYIIGESDQETYPLQKKRHSFEFLR-EIPHLRIR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN------- 187
            +T       + +I   +        F    TPI+T++  EG  +    S +N       
Sbjct: 128 TNTFGAVARIKNQISYKIHEYFQKNGFFYIHTPIITSNDGEGVGEIFRVSTLNLNNIENK 187

Query: 188 -----QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                +  F+   A      Q      A    + +   P FR E+  + R   EF+ ++ 
Sbjct: 188 KEIDFKDDFFGKQAFLTVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWMIEP 247

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSN 266
           EM+F   +D +N  E+ L+ V  E  N
Sbjct: 248 EMAFFTLEDNINLAEDFLKYVLSETLN 274


>gi|260584307|ref|ZP_05852054.1| lysine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157825|gb|EEW92894.1| lysine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 501

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 112/247 (45%), Gaps = 15/247 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  I+D  G  Q+    D         V  E     D   +  
Sbjct: 66  VQIAGRIMTKRGKGKAGFAHIQDGKGQIQIYVRKDV--------VGDEAYELFDKADLGD 117

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL--RRDT 137
               +   ++T   ELS +  + + + + L PLP           +++ R+LDL   RD+
Sbjct: 118 IVGVVGTVMVTNTGELSVKATQFVHLTKALRPLPDKYHGLTNVEQQYRQRYLDLISNRDS 177

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
           + +  V R++II  +R  + + +++E  TP+L T +    AR F+          Y +  
Sbjct: 178 MDR-FVTRSKIIREIRHYLDSRDYLEVETPVLHTLAGGANARPFITHHNALDMELY-MRI 235

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  D+++  E +
Sbjct: 236 APELHLKRLVVGGMERVYEIGRVFRNEGIDTTHNP-EFTSIEIYTAYTDYQDVMDLTEGI 294

Query: 257 LRGVFEE 263
           +  V +E
Sbjct: 295 VSSVAQE 301



 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 29/41 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +A + G+ P GG+  GIDR+VMLL  ++++R V LFP  ++
Sbjct: 459 QALEYGLSPTGGVGIGIDRLVMLLTNSQSIRNVLLFPTMKH 499


>gi|157414225|ref|YP_001485091.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|166980068|sp|A8G7C4|SYK_PROM2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157388800|gb|ABV51505.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 512

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 127/284 (44%), Gaps = 26/284 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR------SEWVLCID 74
           V ++G V   R  G I F  I D  G  Q+  +       + K          E V   D
Sbjct: 53  VSVAGRVLAKRVMGKIAFFTISDQEGQIQLYLDKRIINLNLEKQKLLSFEDIKEIVDIGD 112

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            + +  + +  N     G++ +  +K E+LS + + PLP           R++ R+LDL 
Sbjct: 113 WIGVYGTIKKTNK----GELSIKVEKWEMLSKSLQ-PLPDKWHGLTDIEKRYRQRYLDLI 167

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            +   KN+ K R + I+ +R  +   NF+E  TPIL + +    AR F+          Y
Sbjct: 168 VNPHSKNVFKTRAKCISFIRKWLDNRNFLEIETPILQSEAGGAEARPFITHHNTLDIPLY 227

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + + + ++  GF++ +++   FR+E   +   P EF  +++  ++ +  D++N 
Sbjct: 228 -LRIATELHLKRMVVGGFEKVYEMGRIFRNEGISTRHNP-EFTSVEIYEAYSDYFDMMNL 285

Query: 253 MENVLRGVFEEFSNGNTV----------SNNFLRICYDDAIRRY 286
            E +++ V  + S G+ +          S  +LRI   D +++Y
Sbjct: 286 TEELIKDVVAD-SCGSLIINYQNKEIDFSKPWLRISMKDIVKKY 328



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR++ML+  + ++R+V  FP+
Sbjct: 457 ALEIGMPPTGGLGIGIDRLIMLITNSASIRDVIPFPL 493


>gi|124265793|ref|YP_001019797.1| lysyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|166229811|sp|A2SDC3|SYK_METPP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|124258568|gb|ABM93562.1| lysyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 508

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 15/242 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
            R++G +   R  G   F  ++D  G  Q+    D+   E A +    W L   G ++  
Sbjct: 73  ARIAGRMMLKRVMGKACFATLQDGSGRIQLYITSDAVGPE-ALAAFKHWDL---GDILG- 127

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
            AE       TG++ L    I +L+ +   PLP        + ++++ R +DL  D   +
Sbjct: 128 -AEGTLFKTRTGELSLKVGTIRLLTKSLR-PLPDKFHGMADQELKYRQREVDLIMDEASR 185

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP-SRVNQGSFYALPQ 196
              + R++ ++S+R  M+   F+E  TP+L    P GA  + F+   + ++Q  F  +  
Sbjct: 186 ERFRARSKAVSSIRQFMVEHGFLEVETPMLH-PIPGGANAKPFVTHHNALDQQMFLRI-- 242

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R F+I   FR+E       P EF  ++   ++    D+++  E +
Sbjct: 243 APELYLKRLVVGGFERVFEINRNFRNEGVSVRHNP-EFTMMEFYAAYWTHHDLMDFTEQI 301

Query: 257 LR 258
           LR
Sbjct: 302 LR 303



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR++MLL  + N+R+V LFP
Sbjct: 466 RALEHGLPPTGGCGIGIDRLMMLLTDSPNIRDVILFP 502


>gi|320450006|ref|YP_004202102.1| lysyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320150175|gb|ADW21553.1| lysyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 491

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 120/271 (44%), Gaps = 24/271 (8%)

Query: 2   HRY-RTHSCGDLGVSDVGS--------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           +RY +THS  ++  +  G+         V L+G +  +R  G + F  + D  G  Q+  
Sbjct: 25  YRYPKTHSAKEILSAKEGAPPESEWEEEVALAGRIVALRRMGKVTFAHLLDESGKIQLYF 84

Query: 53  NPD-SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
             D +  +E+ K +    +L + G V +     +   +++           ++     LP
Sbjct: 85  QKDLTPSYELLKKLDVGDILGVKGTVFTTKTGEVTVKVLSW--------TPLVKSLHPLP 136

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKR-TRIINSMRCRMIAENFIECSTPILT 170
               G ++  + +R++ R+LDL  +   + + +R T ++  +R       F+E  TPIL 
Sbjct: 137 DKWHGIKD--KEVRYRQRYLDLIVNPEVREVFRRRTAMVRYIRRFFEERGFLEVETPILQ 194

Query: 171 ASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
            ++    AR F          FY L  + + Y + L+  GF++ F+I   FR+E    + 
Sbjct: 195 PTTGGAEARPFKTYHNALDHEFY-LRISLELYLKRLLVGGFEKVFEIGRNFRNEGIDHNH 253

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            P EF  L+   ++ +  D+   +E +L G+
Sbjct: 254 NP-EFTMLEAYWAYADYQDMAKLVEELLSGL 283



 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 25/37 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  G+DR+ M+L    ++R+V LFP+
Sbjct: 443 ALEYGMPPAAGLGLGLDRLAMILTDQPSLRDVLLFPL 479


>gi|289168135|ref|YP_003446404.1| Lysyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288907702|emb|CBJ22539.1| Lysyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 496

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 112/251 (44%), Gaps = 19/251 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D      ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLR 258
           DI++  E +++
Sbjct: 283 DIMDLTEGIIQ 293



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|256419549|ref|YP_003120202.1| lysyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256034457|gb|ACU58001.1| lysyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 504

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 118/252 (46%), Gaps = 22/252 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVLCIDGLVMS 79
           L+G +  VR  G   F+ ++DH    Q+    D  C    K+   V  + +L +  ++  
Sbjct: 57  LAGRIMAVRDMGKAAFVKLQDHTTQMQLYIRRDDICNGDDKTMFDVVFKKLLDLGDIIGV 116

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYRFL 131
           +    I     TG++ +   K+++L+ +   PLPV  E+E         PE  +++ R++
Sbjct: 117 KGYAFITK---TGELSIHVTKLDVLAKSIR-PLPVVREKEGEVFDAVTDPE-FKYRQRYV 171

Query: 132 DLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQ 188
           DL  +   K + +KRTRI+ ++R       ++E  TPIL    P G  AR F        
Sbjct: 172 DLIVNPQVKEVFIKRTRIMQTIRDFYNDLGYLEVETPIL-QPIPGGATARPFTTHHNALD 230

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  A + Y + L+  GF+  ++ A  FR+E       P EF  ++M  ++ + + 
Sbjct: 231 IPLY-MRIANELYLKRLIVGGFEGVYEFAKDFRNEGMDRTHNP-EFTVMEMYAAYKDYEW 288

Query: 249 ILNTMENVLRGV 260
           +++T E +L  +
Sbjct: 289 MMDTTETLLEKI 300



 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  GI  GIDR+ M++    ++++V  FP
Sbjct: 460 RALEYGMPPTSGIGIGIDRLTMIMTNQPSIQDVLFFP 496


>gi|72080546|ref|YP_287604.1| lysyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 489

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 7/178 (3%)

Query: 91  TGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRI 148
           TGQ+ +      +L+ +   LP   +G  E P+  +++ R+LDL  ++      + R++I
Sbjct: 117 TGQLSIKVNNFSLLTKSLHPLPDQYYG-IENPDE-KYRKRYLDLLVNSESAKTFRLRSKI 174

Query: 149 INSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I+ +R    ++ F+E  TP+L        A+ F+        +FY         K+LL+A
Sbjct: 175 ISLIRTFFDSQGFLEVDTPVLHPVLGGASAKPFITYYNSLSQNFYLRIATELPLKKLLVA 234

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
            GFDR ++I   FR+E   S   P EF  ++   ++   + I++  EN+ R +FE+ +
Sbjct: 235 -GFDRVYEIGKIFRNEGFDSTHNP-EFTSIEFYQAYANLEKIMDQTENLFRFLFEKLN 290



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + GMPP GG   GIDR+ MLL   +++REV LFP
Sbjct: 446 QALEYGMPPAGGCGIGIDRLTMLLTKNESIREVILFP 482


>gi|296876143|ref|ZP_06900197.1| lysine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296432854|gb|EFH18647.1| lysine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 496

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 114/252 (45%), Gaps = 21/252 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D+     ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDLNETAIIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLP-VFGEREYPESIRFKY 128
           L ++G +M            T   ELS +   I  +++ L PLP  F      E+I ++ 
Sbjct: 116 LGVEGEIMR-----------TDMGELSIKVTHITHLSKALRPLPEKFHGLSDVETI-YRK 163

Query: 129 RFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           R+LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +    
Sbjct: 164 RYLDLISNRESFER-FVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAAKPFITHHN 222

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ + 
Sbjct: 223 AQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADF 281

Query: 247 DDILNTMENVLR 258
            DI++  E +++
Sbjct: 282 HDIMDLTEGIIQ 293



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           LQ F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+V 
Sbjct: 431 LQRFEAQARAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTNVTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|297172686|gb|ADI23653.1| lysyl-tRNA synthetase (class II) [uncultured Gemmatimonadales
           bacterium HF4000_15H13]
          Length = 508

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 122/303 (40%), Gaps = 40/303 (13%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
             S G L     G    L G +   R HG   F+ + D  G  Q+    D    E    +
Sbjct: 46  AESEGRLSEDGDGEAAWLGGRIVSWRGHGKSAFVHLEDGDGSIQIYFKKDVLGDESFADL 105

Query: 66  R----SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 +W+        +R          TG+I + A+   +L+ +   PLP FG+ E  
Sbjct: 106 DLMDLGDWIGVQGQPFRTR----------TGEITVRAESYTLLTKSLR-PLP-FGKVETD 153

Query: 122 --------------ESIRFKYRFLDLRRDTLHKNIVK----RTRIINSMRCRMIAENFIE 163
                         +  R++ R+ DL    +H  + +    R+RI++++R    +E F+E
Sbjct: 154 AETGERTVHSGFSDQETRYRQRYADL---AVHPEVREVFRTRSRIVSALRSFFDSEGFLE 210

Query: 164 CSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
             TP+L        A+ F+        + Y L  A + Y + L+  G DR ++IA  FR+
Sbjct: 211 VETPVLQPLYGGASAKPFVTTHHALDQTMY-LRIADELYLKRLIVGGLDRVYEIAKDFRN 269

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           E       P EF  L+   +F +  D ++ +E +L  V +      TV+     I ++  
Sbjct: 270 EGLSRVHNP-EFTMLEWYQAFADYRDQMDMVERMLLHVLDSVIGSRTVTYGEHEITFEPP 328

Query: 283 IRR 285
            +R
Sbjct: 329 FQR 331



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 30/41 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           RA + GMPP GG+  G+DR+VM+L    ++R+V LFP+ ++
Sbjct: 466 RALEYGMPPTGGVGMGVDRLVMMLTNQTSIRDVILFPILRD 506


>gi|302507766|ref|XP_003015844.1| hypothetical protein ARB_06156 [Arthroderma benhamiae CBS 112371]
 gi|291179412|gb|EFE35199.1| hypothetical protein ARB_06156 [Arthroderma benhamiae CBS 112371]
          Length = 542

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 16/195 (8%)

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186
           R ++L       NI++ R+ I +SMR       F+E +TPIL + S    A+ F+  +  
Sbjct: 189 RHVELLSSPSAANILRARSLITHSMRNFFANREFMEVNTPILASKSGGAIAQPFVTSATE 248

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                 +L  AP+ + + L+  GFDR F+I P FR+E       P EF   +   +F + 
Sbjct: 249 FPDRPLSLRIAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP-EFTTCEFYQAFADL 307

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLR---ICYDDAIRRY----------GTDKPDL 293
           + ++ T E++L  +  E    N   NN L    + +    RR           G   PDL
Sbjct: 308 ESLIETTESLLSTLALEVQQLNKKLNNSLSPTTVSFTGPYRRVDFIPAIEEAIGRKLPDL 367

Query: 294 RNPIIMHNVTEHFVH 308
           ++   +  V E F +
Sbjct: 368 QSDNALSQVKEIFAN 382



 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 23/39 (58%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G  +  + G+PP GG   GIDR+ ML  GA+ + +V  F
Sbjct: 486 GYLQTLEWGLPPTGGWGCGIDRLCMLFTGARRISDVLSF 524


>gi|302407898|ref|XP_003001784.1| lysyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261359505|gb|EEY21933.1| lysyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 606

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 125/265 (47%), Gaps = 15/265 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIA-----KSVR 66
           G  +    +R+   ++  R  G  ++F D+R      QV+        +++       +R
Sbjct: 115 GEHNKDKILRVGARIYNKRASGSKLVFYDVRVEGVKVQVMCQAQEVTGDVSFDDQHLHLR 174

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIR 125
              ++ I G     + ++       G++ + A +I++L+     LP   +G ++  E  R
Sbjct: 175 RGDIIGIVGYPGRTAPKSKLEKGEEGELSIFATEIKLLTPCLHNLPDEYYGLKDQEE--R 232

Query: 126 FKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV- 182
           F+ R+LDL  +   +N ++ R++++  +R  +   +F+E  TP + A +    A+ F+  
Sbjct: 233 FRKRYLDLMMNDRSRNTLITRSKMVTYIRRYLDERDFVEVETPQMNAIAGGATAKPFITY 292

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            + ++   F  +  AP+ Y + L+  G +R ++I   FR+E       P EF   +   +
Sbjct: 293 HNELDMTMFMRI--APELYLKELVVGGLNRVYEIGRQFRNEGLDLTHNP-EFTTCEFYEA 349

Query: 243 FVEQDDILNTMENVLRGVFEEFSNG 267
           + +  D++NT E+++ G+ +  + G
Sbjct: 350 YADVYDLMNTTEDLVSGLVKHLTGG 374


>gi|182413900|ref|YP_001818966.1| lysyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177841114|gb|ACB75366.1| lysyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 500

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 147/325 (45%), Gaps = 32/325 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLCIDGL 76
           V ++G +   R  GG  F+ I+D  G  Q+    D    E      K++    ++ + G 
Sbjct: 58  VTVAGRLVTFRVQGGSSFVKIQDQQGQIQLYFRKDVLGEERYGFFKKALDLGDIIGVTGT 117

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDLRR 135
           +             TG+I +      ++S A   PLP  F     PE + ++ R+LD+  
Sbjct: 118 LFKTK---------TGEITVRVDSFTLVSKALR-PLPEKFHGLSDPEQV-YRQRYLDVIM 166

Query: 136 DTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYA 193
           +   +  ++ R+RI++ +R  +   +FIE  TP+L A++    AR F+         F+ 
Sbjct: 167 NQESRARLMLRSRIVSHVRRFLEGRSFIEVETPVLEATAGGAAARPFVTHHNALNVDFFL 226

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                 + K++L+  GFDR F+I   FR+E   S R   EF  L++  ++ +   ++  +
Sbjct: 227 RIATELRLKRMLVG-GFDRVFEIGRIFRNEGV-SRRHNPEFTMLEVYQAYSDYRGMMTLI 284

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR--YGTDKPDLRNPIIMHNVT---EHFVH 308
            ++L  +  +       ++  L+I +  + +   +G +  ++R   ++  VT   E F  
Sbjct: 285 RDLLTSLVRDIVKP---ADGSLKIKHSASGQEIDFGGEWREVRYKDLIKEVTGDAEWFSR 341

Query: 309 SEFRVFSKI----LSVNPGYEVWAI 329
           S+    +K     L ++PG+E + I
Sbjct: 342 SKAEKIAKAEAMGLQIHPGWEEFEI 366



 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 4/83 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAF-SNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           ++L   G E+A      +  +V  + F    G  K+ ++  F     A + GMPP GG+ 
Sbjct: 409 FELTIGGMEVAPAYSEQNDPDVQREMFEKQAGEEKQNIDQDF---LLALEHGMPPAGGMG 465

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            GIDR+ +LL GA+++R+V LFP
Sbjct: 466 VGIDRLCILLTGAESIRDVILFP 488


>gi|307709178|ref|ZP_07645637.1| lysyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307620124|gb|EFN99241.1| lysyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 496

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 120/278 (43%), Gaps = 19/278 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D      ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           DI++  E +++   +       V+     I  ++  +R
Sbjct: 283 DIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFKR 320



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|269123799|ref|YP_003306376.1| lysyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268315125|gb|ACZ01499.1| lysyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 496

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 19/242 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR----SEWVLCIDGLV 77
           + +G +   R  G   F  I+D  G  Q+ A  D    E  ++ +     ++V  +  L 
Sbjct: 57  KTAGRIMSYRRMGKNGFAHIQDPTGKIQIYAKKDEIGEEEYETFKRLATGDFVGVVGKLF 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
            ++          TG++ + A  +EILS     PLP          +R++ R++DL  + 
Sbjct: 117 RTQ----------TGELTIKASHLEILS-KNIRPLPDKFSGLQNIEMRYRQRYIDLVMNP 165

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALP 195
            +   + KR  II   R  +  + F+E  TP+L  +     AR F+          Y L 
Sbjct: 166 EVMDTMKKRFEIIRYFRTYLEKKGFLEVETPMLHPTLGGANARPFITHHNALDMDMY-LR 224

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF++ F+I   FR+E       P EF  +++  ++ + +D+++  E+
Sbjct: 225 IAPELYLKRLLVGGFEKVFEINRNFRNEGVSIKHNP-EFTMMELYQAYADFNDMMDITED 283

Query: 256 VL 257
           ++
Sbjct: 284 LI 285



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  + ++R+V +FP
Sbjct: 451 RALEYGMPPAGGLGIGIDRLVMLLTNSSSIRDVIMFP 487


>gi|166229888|sp|Q4AAC7|SYK_MYCHJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|144227509|gb|AAZ44294.2| lysyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 491

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 7/178 (3%)

Query: 91  TGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRI 148
           TGQ+ +      +L+ +   LP   +G  E P+  +++ R+LDL  ++      + R++I
Sbjct: 119 TGQLSIKVNNFSLLTKSLHPLPDQYYG-IENPDE-KYRKRYLDLLVNSESAKTFRLRSKI 176

Query: 149 INSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I+ +R    ++ F+E  TP+L        A+ F+        +FY         K+LL+A
Sbjct: 177 ISLIRTFFDSQGFLEVDTPVLQPVLGGASAKPFITYYNSLSQNFYLRIATELPLKKLLVA 236

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
            GFDR ++I   FR+E   S   P EF  ++   ++   + I++  EN+ R +FE+ +
Sbjct: 237 -GFDRVYEIGKIFRNEGFDSTHNP-EFTSIEFYQAYANLEKIMDQTENLFRFLFEKLN 292



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + GMPP GG   GIDR+ MLL   +++REV LFP
Sbjct: 448 QALEYGMPPAGGCGIGIDRLTMLLTKNESIREVILFP 484


>gi|197117228|ref|YP_002137655.1| lysyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197086588|gb|ACH37859.1| lysyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 492

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 124/281 (44%), Gaps = 23/281 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           SFV ++G +   R  G   F+ ++D  G  Q+    D+   E+     +  +  I G   
Sbjct: 55  SFV-VAGRILMRRSFGKAAFVQVQDRKGRMQLYMKKDTLGEELFAEFENYDIGDIIG--- 110

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
              A        TG++ L+  ++ +L+ +  LPLP           R++ R++DL     
Sbjct: 111 ---ATGTPFRTKTGELSLAVSELRLLTKSL-LPLPEKFHGLTDVETRYRQRYVDLIVSPD 166

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALP 195
           + +   KR+R+I  +R  M   +F+E  TP++    P GA  + F           + L 
Sbjct: 167 VREVFYKRSRVIQLIRDFMTKNDFLEVETPMM-HPIPGGATAKPFATHHNALDMELF-LR 224

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++   +D++N  E 
Sbjct: 225 IAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYQAYATFEDLMNYTEE 283

Query: 256 VLRGVFEE------FSNGN---TVSNNFLRICYDDAIRRYG 287
           +L  V +E      FS G    +    + R    +AI  YG
Sbjct: 284 LLCHVAQELLGTLDFSYGGEPISFQRPWRRFTVKEAILEYG 324



 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 449 RALEYGLPPTAGEGIGIDRLVMLLTDSPSIRDVILFP 485


>gi|86147406|ref|ZP_01065719.1| lysyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85834834|gb|EAQ52979.1| lysyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 510

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 24/233 (10%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIIN 150
           G + ++ ++ E+L+ A   PLP        + +R++ R++DL  +   +N  + R+++++
Sbjct: 133 GDLYVNMEEFELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNTFIVRSKLVS 191

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           S+R  M ++ ++E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 192 SIRNFMSSKGYLEVETPMMHVI-PGGATARPFITHHNALDIDMY-LRVAPELYLKRLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++   ++ +  D+++  E +L     +     
Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTAAMDVLGST 308

Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTE 304
           ++            + R+   DAI+ Y  +        + DL+N  +M  + E
Sbjct: 309 SMPYGDETVEFGGTYARMSMFDAIKHYTPENANIQALTEDDLQNRELMVKIAE 361



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ ML      +R+V LFP
Sbjct: 469 ALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFP 504


>gi|218708551|ref|YP_002416172.1| lysyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|218321570|emb|CAV17522.1| Lysyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 510

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 24/233 (10%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIIN 150
           G + ++ ++ E+L+ A   PLP        + +R++ R++DL  +   +N  + R+++++
Sbjct: 133 GDLYVNMEEFELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNTFIVRSKLVS 191

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           S+R  M ++ ++E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 192 SIRNFMSSKGYLEVETPMMHVI-PGGATARPFITHHNALDIDMY-LRVAPELYLKRLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++   ++ +  D+++  E +L     +     
Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTAAMDVLGST 308

Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTE 304
           ++            + R+   DAI+ Y  +        + DL+N  +M  + E
Sbjct: 309 SMPYGDETVEFGGTYARMSMFDAIKHYTPENANIQALTEDDLQNRELMVKIAE 361



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ ML      +R+V LFP
Sbjct: 469 ALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFP 504


>gi|166229887|sp|Q4A8F8|SYK_MYCH7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|144575320|gb|AAZ53581.2| lysyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 491

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 7/178 (3%)

Query: 91  TGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRI 148
           TGQ+ +      +L+ +   LP   +G  E P+  +++ R+LDL  ++      + R++I
Sbjct: 119 TGQLSIKVNNFSLLTKSLHPLPDQYYG-IENPDE-KYRKRYLDLLVNSESAKTFRLRSKI 176

Query: 149 INSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I+ +R    ++ F+E  TP+L        A+ F+        +FY         K+LL+A
Sbjct: 177 ISLIRTFFDSQGFLEVDTPVLHPVLGGASAKPFITYYNSLSQNFYLRIATELPLKKLLVA 236

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
            GFDR ++I   FR+E   S   P EF  ++   ++   + I++  EN+ R +FE+ +
Sbjct: 237 -GFDRVYEIGKIFRNEGFDSTHNP-EFTSIEFYQAYANLEKIMDQTENLFRFLFEKLN 292



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + GMPP GG   GIDR+ MLL   +++REV LFP
Sbjct: 448 QALEYGMPPAGGCGIGIDRLTMLLTKNESIREVILFP 484


>gi|158520113|ref|YP_001527983.1| asparaginyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158508939|gb|ABW65906.1| asparaginyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 445

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 97/228 (42%), Gaps = 12/228 (5%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGL 76
           S VR+ GWV   R    + FL+I D   +   QVVA      FE  + + S   + + G 
Sbjct: 17  SGVRVCGWVKTCRNSKALSFLEINDGSCLQSLQVVAPAQLDNFEQVQKLLSGSAVAVSGD 76

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +++  A+         Q EL+A++++I+S  +E   P+  +R   E +R     L  R +
Sbjct: 77  LVASPAKG-------QQWELAARRVDIVSRTDET-YPLQKKRHSDEFLR-TIAHLRPRTN 127

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVNQGSFYALP 195
                   R+    ++   +  + F    TPILT S  EGA + F V SR          
Sbjct: 128 KYSALFRLRSEAGFAIHSYLRDQGFFHVHTPILTGSDCEGAGELFSVTSRSPLFDRDVFL 187

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               Q    + A    R +   P FR E   + R   EF+ ++ E++F
Sbjct: 188 TVSGQLAAEMFALCLGRVYTFGPVFRAEHSNTARHAAEFWMVEPEIAF 235



 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 4/76 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G  R    +V+ Q   N G+SK    + +G    + + G   H G   G +R +ML
Sbjct: 368 ELIGGSQREERLDVLEQQMDNSGLSK----DHYGWYLDSRRYGSVAHSGFGMGFERFLML 423

Query: 550 LLGAKNVREVSLFPMS 565
           + G  N+R+V  FP +
Sbjct: 424 VSGVSNIRDVIPFPRT 439


>gi|84393963|ref|ZP_00992703.1| lysyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84375407|gb|EAP92314.1| lysyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 510

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 24/233 (10%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150
           G + ++ ++ E+L+ A   PLP        + +R++ R++DL  +   +N  + R+++++
Sbjct: 133 GDLYVNMEEFELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNTFIVRSKLVS 191

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           S+R  M ++ ++E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 192 SIRNFMSSKGYLEVETPMMHVI-PGGATARPFITHHNALDIDMY-LRVAPELYLKRLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDR F+I   FR+E   S R   EF  ++   ++ +  D+++  E +L     +     
Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTAAMDVLGST 308

Query: 269 TV---------SNNFLRICYDDAIRRYGTD--------KPDLRNPIIMHNVTE 304
           ++            + R+   DAI+ Y  +        + DL+N  +M  + E
Sbjct: 309 SMPYGDETVEFGGTYARMSMFDAIKHYTPENANIQALTEDDLQNRELMVKIAE 361



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ ML      +R+V LFP
Sbjct: 469 ALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFP 504


>gi|205371965|ref|ZP_03224783.1| lysyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 498

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 113/256 (44%), Gaps = 19/256 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  I+D  G  Q+    D+     +E+ K      ++ + G V
Sbjct: 63  VAIAGRIMTKRGKGKAGFTHIQDLTGQIQLYVRQDAVGEEAYELFKQADLGDLVGVAGTV 122

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RR 135
                         G++ +     E+L+ A   LP    G ++  +  R++ R+LDL   
Sbjct: 123 FKTKV---------GELSIKVTSFELLTKALRPLPEKYHGLKDVEQ--RYRQRYLDLITN 171

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
               +  + R+RII SMR  + +  ++E  TP++ + +    AR F           + +
Sbjct: 172 QESRETFIARSRIIQSMRRYLDSNGYLEVETPMMHSIAGGASARPFTTHHNALDMPLF-M 230

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + +DI+   E
Sbjct: 231 RIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYNDIMELTE 289

Query: 255 NVLRGVFEEFSNGNTV 270
           N++  + +E     TV
Sbjct: 290 NLVAHIAQEVLGTTTV 305



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 30/40 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP+ ++
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPLMRH 496


>gi|195056323|ref|XP_001995060.1| GH22841 [Drosophila grimshawi]
 gi|193899266|gb|EDV98132.1| GH22841 [Drosophila grimshawi]
          Length = 460

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 119/290 (41%), Gaps = 37/290 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            S  G  +++ GW+  VR     IFLDI D  G T       S  F++     +      
Sbjct: 20  ASKPGETLQVQGWIKNVRRLKNNIFLDIND--GST-------SEKFQLVVPRNASTQQLA 70

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGEREYPESIRFKYRF 130
            G V+S       A    G  EL A  ++ L+   + +  P     ++  PE +R ++  
Sbjct: 71  SGSVISAVGRVQLAP--NGHYELHADAVQCLAEGHLQDGYPF-TPKQKHAPEYVR-EHLH 126

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPSRVNQ 188
           L  R D +   +  R +   ++   M   +F++ +TPILT +  EGA +   + P     
Sbjct: 127 LRARVDYIAAQMRIRHKAQKAIHDYMDELHFVQINTPILTTNDCEGAGEVFRVQPDSEQL 186

Query: 189 GSFYALPQAP--QQY---KQLL----------MASGFDRYFQIAPCFRDEDPRSDRLPGE 233
               A P  P  Q Y   K  L          M+ G    + +AP FR E+ +S     E
Sbjct: 187 LKQMARPSVPVEQSYFDQKVFLSVSGQLHLEAMSYGLGNTYTLAPAFRAENSKSPLHLAE 246

Query: 234 FYQLDMEMSFVEQDDILNT-MENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           FY  + E+  +EQ D L   +E +L+ + +   N    S + L  C + A
Sbjct: 247 FYMFEAELVHMEQLDALAAFIERMLKDITQRLLNS---SASDLHFCQESA 293


>gi|253702017|ref|YP_003023206.1| lysyl-tRNA synthetase [Geobacter sp. M21]
 gi|251776867|gb|ACT19448.1| lysyl-tRNA synthetase [Geobacter sp. M21]
          Length = 492

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 124/281 (44%), Gaps = 23/281 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           SFV ++G +   R  G   F+ ++D  G  Q+    D+   E+     +  +  I G   
Sbjct: 55  SFV-VAGRILMRRSFGKAAFVQVQDRKGRMQLYMKKDTLGEELFAEFENYDIGDIIG--- 110

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
              A        TG++ L+  ++ +L+ +  LPLP           R++ R++DL     
Sbjct: 111 ---ATGTPFRTKTGELSLAVTELRLLTKSL-LPLPEKFHGLTDVETRYRQRYVDLIVSPD 166

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALP 195
           + +   KR+R+I  +R  M   +F+E  TP++    P GA  + F           + L 
Sbjct: 167 VREVFYKRSRVIQLIRDFMTKNDFLEVETPMM-HPIPGGATAKPFATHHNALDMELF-LR 224

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++   +D++N  E 
Sbjct: 225 IAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYQAYATFEDLMNYTEE 283

Query: 256 VLRGVFEE------FSNGN---TVSNNFLRICYDDAIRRYG 287
           +L  V +E      FS G    +    + R    +AI  YG
Sbjct: 284 LLCHVAQELLGTLDFSYGGEPISFQRPWRRFTVKEAILEYG 324



 Score = 45.4 bits (106), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 449 RALEYGLPPTAGEGIGIDRLVMLLTDSPSIRDVILFP 485


>gi|115386114|ref|XP_001209598.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114190596|gb|EAU32296.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 559

 Score = 57.4 bits (137), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 35/214 (16%)

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF-GEREYPESI--- 124
           ++ + G+V  +  +T  A+      E+  +K+ ++S  A++LP+ V   ER  PE+    
Sbjct: 155 IVQVTGVV--KKPQTPIASATLSNHEIHIRKVYMISEAAQQLPMQVKDAERPPPETTEEG 212

Query: 125 ---------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS---- 165
                          R   R LDL+ +T      +    I+S    + AE  I+      
Sbjct: 213 FQTDADGAPIVTLKTRLDNRVLDLQTET-----SQAITWISSGVAELFAEYMIKSGSRWI 267

Query: 166 -TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP L  ++ EG           +  + A  Q+PQ YKQ+ +A   +  F+IAP FR ED
Sbjct: 268 FTPKLVGAATEGGSGVFEVKYFKRNGYLA--QSPQLYKQMCIAGDMESVFEIAPVFRAED 325

Query: 225 PRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVL 257
             + R   EF  LD E +F     ++L   EN+L
Sbjct: 326 SNTHRHLTEFSGLDFEKTFHAHYHEVLEFAENLL 359



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R +  + +  +    G+  E  +  F     AF+ G PPH G   
Sbjct: 472 YDFFMRGEEIMSGAQRINDIKELEASMRAKGV--EPNQEGFEDYLNAFRQGCPPHAGGGL 529

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIVM  LG  NVR  +LFP
Sbjct: 530 GLNRIVMFFLGLPNVRLATLFP 551


>gi|312601164|gb|ADQ90419.1| lysyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 488

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 7/178 (3%)

Query: 91  TGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRI 148
           TGQ+ +      +L+ +   LP   +G  E P+  +++ R+LDL  ++      + R++I
Sbjct: 116 TGQLSIKVNNFSLLTKSLHPLPDQYYG-IENPDE-KYRKRYLDLLVNSESAKTFRLRSKI 173

Query: 149 INSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I+ +R    ++ F+E  TP+L        A+ F+        +FY         K+LL+A
Sbjct: 174 ISLIRTFFDSQGFLEVDTPVLQPVLGGASAKPFITYYNSLSQNFYLRIATELPLKKLLVA 233

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
            GFDR ++I   FR+E   S   P EF  ++   ++   + I++  EN+ R +FE+ +
Sbjct: 234 -GFDRVYEIGKIFRNEGFDSTHNP-EFTSIEFYQAYANLEKIMDQTENLFRFLFEKLN 289



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + GMPP GG   GIDR+ MLL   +++REV LFP
Sbjct: 445 QALEYGMPPAGGCGIGIDRLTMLLTKNESIREVILFP 481


>gi|310779798|ref|YP_003968130.1| asparaginyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309749121|gb|ADO83782.1| asparaginyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 463

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 127/315 (40%), Gaps = 61/315 (19%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLC 72
           S +G  V +SGWV ++R      F++I D   +   QVV   +   FE    V     L 
Sbjct: 15  SFIGKEVVISGWVKKIRSQKKFGFIEINDGSFFKGIQVVFESELDNFEEISKVSISSTLV 74

Query: 73  IDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
           I G ++    +        GQ IE+ A ++EI   A+ L  P+  +R   E +R     L
Sbjct: 75  IKGKLVESQGK--------GQSIEILASEVEIFQKAD-LDFPLQNKRHSFEFLR-TIAHL 124

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------V 182
             R +T       R+ +  ++       +F+   TPI+T +  EGA +           V
Sbjct: 125 RPRTNTFSAVFRVRSVLAYAIHKFFQENDFVYVHTPIITGADCEGAGEMFRVTTLDLDNV 184

Query: 183 PSRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           P +  +GS      F+          QL      + F   +   P FR E+  + R   E
Sbjct: 185 P-KTEEGSIDEAKDFFGKETNLTVSGQLNVETYCAAFRNVYTFGPTFRAENSNTSRHASE 243

Query: 234 FYQLDMEMSF-------------------------VEQDDILNTMENVLRGVFEEFSNGN 268
           F+ ++ E++F                          E+ +  N+   + +G+FE+ +  N
Sbjct: 244 FWMIEPEVAFGDLGVNMELAEAMVKYVIKYVMDECPEEMEFFNSF--IEKGLFEKLN--N 299

Query: 269 TVSNNFLRICYDDAI 283
            ++N+F R+ Y +AI
Sbjct: 300 VLNNDFGRVTYTEAI 314


>gi|229169285|ref|ZP_04296996.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614180|gb|EEK71294.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 463

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 70/323 (21%), Positives = 126/323 (39%), Gaps = 61/323 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V     ++
Sbjct: 21  VQVSGWIRNLRDSKAFGFIELNDGSFFKGVQIVFDTELENFKEIAKLPLSSSVKVEGKVI 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A+KI+I  +++    P+  +R   E +R       LR  T
Sbjct: 81  ATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHLRPRT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              +   R R I +       +   F+   TPI+T S  EGA +     RV       +P
Sbjct: 129 NAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDLNNVP 185

Query: 196 QAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           +                       Q      A  F   +   P FR E+  + R   EF+
Sbjct: 186 KGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFW 245

Query: 236 QLDMEMSFVEQDDILNTMENVLR--------------GVFEEFSN-------GNTVSNNF 274
            ++ E++F E  D+++  E++L+                F  F +        N ++++F
Sbjct: 246 MVEPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVINSDF 305

Query: 275 LRICYDDAIRRYGTDKPDLRNPI 297
            RI Y +AI+       + + P+
Sbjct: 306 GRITYTEAIKVLQESGAEFKYPV 328


>gi|71893559|ref|YP_279005.1| lysyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 489

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 7/178 (3%)

Query: 91  TGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRI 148
           TGQ+ +      +L+ +   LP   +G  E P+  +++ R+LDL  ++      + R++I
Sbjct: 117 TGQLSIKVNNFSLLTKSLHPLPDQYYG-IENPDE-KYRKRYLDLLVNSESAKTFRLRSKI 174

Query: 149 INSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I+ +R    ++ F+E  TP+L        A+ F+        +FY         K+LL+A
Sbjct: 175 ISLIRTFFDSQGFLEVDTPVLQPVLGGASAKPFITYYNSLSQNFYLRIATELPLKKLLVA 234

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
            GFDR ++I   FR+E   S   P EF  ++   ++   + I++  EN+ R +FE+ +
Sbjct: 235 -GFDRVYEIGKIFRNEGFDSTHNP-EFTSIEFYQAYANLEKIMDQTENLFRFLFEKLN 290



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + GMPP GG   GIDR+ MLL   +++REV LFP
Sbjct: 446 QALEYGMPPAGGCGIGIDRLTMLLTKNESIREVILFP 482


>gi|268530758|ref|XP_002630505.1| C. briggsae CBR-KRS-1 protein [Caenorhabditis briggsae]
          Length = 571

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 109/240 (45%), Gaps = 10/240 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G +H  R  G  ++F DI       Q++AN      ++      + +   D +  +
Sbjct: 105 VSVAGRIHSKRESGSKLVFYDIHGEGTHIQIMANARFHTGDVDFVTLHDRIKRGDIVGFT 164

Query: 80  RSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT- 137
             A    A    G++ L  +++ ++      LP   FG ++  + +RF+ R+LDL  +  
Sbjct: 165 GQATRTKA----GELSLIPKEVLQLTPCLHMLPHSHFGLKD--KELRFRKRYLDLILNPR 218

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           +  N V R++II  +R  +    F+E  TPI+   +        +    +      L  A
Sbjct: 219 VKDNFVIRSKIITFLRRYLDNLGFLEVETPIMNQIAGGATAKPFITHHNDLDMNLFLRVA 278

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y ++L+  G DR +++   FR+E       P EF   +  M++ + +D++   E++L
Sbjct: 279 PELYHKMLVVGGIDRVYEVGRLFRNEGIDLTHNP-EFTTCEFYMAYADYEDVIQLTEDLL 337



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M+L    N++EV LFP
Sbjct: 516 ALEYGLPPTGGWGMGIDRLSMILTDNNNIKEVLLFP 551


>gi|88706909|ref|ZP_01104608.1| Lysyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88698831|gb|EAQ95951.1| Lysyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 499

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 13/173 (7%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           + +R++ R++DL  +   +++ + R+++I+ +R  M A  F+E  TP++        A+ 
Sbjct: 158 QELRYRQRYVDLIVNESSRDVFRTRSKVISYIRKFMDAREFMEVETPMMQPIPGGAAAKP 217

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+        + Y L  AP+ Y + L   GF+R ++I   FR+E   +   P EF  L+ 
Sbjct: 218 FVTHHNALDLTMY-LRIAPELYLKRLTVGGFERVYEINRNFRNEGLSTRHNP-EFTMLEY 275

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAI 283
             ++ +  D ++  E +LRG+ EE      V         S  F R+   DAI
Sbjct: 276 YWAYADYRDAMDLTEAMLRGLTEEVLGTQQVTYQGQVFDFSKPFARMTVIDAI 328



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G E+A+G    + +E   Q F      K+  +     F   Y RA + GMPP 
Sbjct: 408 RFEFFVAGRELANGFSELNDAEDQAQRFQEQVEQKDAGDEEAMHFDADYVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTDSPSIRDVLLFP 494


>gi|229027923|ref|ZP_04184078.1| Lysyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|229170927|ref|ZP_04298530.1| Lysyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228612593|gb|EEK69812.1| Lysyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228733437|gb|EEL84264.1| Lysyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 499

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 72/330 (21%), Positives = 141/330 (42%), Gaps = 50/330 (15%)

Query: 5   RTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RT++  DL +S  G F           V ++G +   R  G   F  I+D +G  Q+   
Sbjct: 37  RTNATNDL-LSLYGEFSKEELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVR 95

Query: 54  PDSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EE 109
            D+     +E+ K+     ++ I+G V   +          G++ + A    +L+ +   
Sbjct: 96  KDAVGDEEYELFKTADLGDLVGIEGKVFKTNV---------GELSVKATGFTLLTKSLRP 146

Query: 110 LPLPVFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           LP    G ++  +  R++ R+LDL      R+T     V R++II  MR  +    ++E 
Sbjct: 147 LPDKYHGLKDVEQ--RYRQRYLDLITSMESRETF----VTRSKIIREMRRYLDDNGYLEV 200

Query: 165 STPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP++ A +    AR F+          Y +  A + + + L+  G ++ ++I   FR+E
Sbjct: 201 ETPMMHAIAGGASARPFITHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NF 274
              +   P EF  +++  ++ +  DI+   EN++  + ++     T+            +
Sbjct: 260 GVSTRHNP-EFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEW 318

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            R+   DAI+ +     D  NP+ +    E
Sbjct: 319 TRLHMVDAIKEHSG--ADFWNPMSVEEARE 346



 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|119947031|ref|YP_944711.1| lysyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|259511530|sp|A1T047|SYK_PSYIN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|119865635|gb|ABM05112.1| lysyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 509

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 10/242 (4%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G   F  I+D  G  Q+    D        +   +W L   G ++   A
Sbjct: 73  IAGRMMMRRIMGKASFATIQDMGGRIQLYVTRDKLPESFYNTEFKKWDL---GDIIG--A 127

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKN 141
           + +     T ++ +   +I IL+ A   PLP            ++ R+LDL   D   K 
Sbjct: 128 KGVLFKTQTNELSIKVSEIRILTKALR-PLPDKFHGLSDTEACYRQRYLDLIANDNSRKT 186

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF-YALPQAPQQ 200
            + R +I+N++R  +   +F+E  TP+L  S P GA      +  N  S    L  AP+ 
Sbjct: 187 FLLRNKIVNAIRQYLNDRDFMEVETPMLQ-SIPGGAAAKPFETYHNALSLPMYLRIAPEL 245

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
             + L+  GF+R F+I   FR+E   +   P EF  ++   ++ +  D++N  E +LR +
Sbjct: 246 NLKRLVVGGFERVFEINRSFRNEGVSTRHNP-EFTMIEFYQAYADYIDLMNLTEEMLRSI 304

Query: 261 FE 262
            E
Sbjct: 305 AE 306



 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G E+A+G    + S+   + F +    KE  ++    +   Y  A + G+PP 
Sbjct: 416 RFEFFVGGRELANGFSELNDSQDQAERFMDQVAQKESGDDEAMFYDADYITALEHGLPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML   +  +R+V LFP
Sbjct: 476 AGEGIGIDRLVMLFTDSHTIRDVLLFP 502


>gi|319442421|ref|ZP_07991577.1| lysyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 540

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 5/163 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLPV   +E  E  R ++R+ DL  R+    N + R +++ ++R  +    F+E  TP+L
Sbjct: 177 PLPV-AHKEMSEDTRIRHRYTDLIMREQARTNAMTRIKVMRALRNALERRGFLEVETPML 235

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T      AR F   S       Y L  AP+ Y +  +  G D+ F++   FR+E   S 
Sbjct: 236 QTLHGGAAARPFETHSNALDIDLY-LRIAPELYLKRCVVGGIDKVFEVNRNFRNEGVDSS 294

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
             P EF  L+   ++   D     + ++++ +  E     TV+
Sbjct: 295 HSP-EFAMLETYQAYGTYDTGAQLIHDIIQEIAVEVFGSTTVT 336



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 11/93 (11%)

Query: 479 AFQYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           A ++DL   GFE+A+G        I+    E   +  ++      V++  F     A + 
Sbjct: 446 AEKWDLYVRGFELATGYSELVDPVIQRERFEDQARLAADGDDEAMVLDEDF---LAAMEQ 502

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP  G   GIDR++M L G   +RE  LFPM
Sbjct: 503 GMPPTSGNGMGIDRLLMALTGL-GIRETVLFPM 534


>gi|302660757|ref|XP_003022054.1| hypothetical protein TRV_03795 [Trichophyton verrucosum HKI 0517]
 gi|291185981|gb|EFE41436.1| hypothetical protein TRV_03795 [Trichophyton verrucosum HKI 0517]
          Length = 542

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 16/195 (8%)

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186
           R ++L       NI++ R+ I +SMR       F+E +TPIL + S    A+ F+  +  
Sbjct: 189 RHVELLSSPSAANILRARSLITHSMRNFFANREFMEVNTPILASKSGGAIAQPFVTSATE 248

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                 +L  AP+ + + L+  GFDR F+I P FR+E       P EF   +   +F + 
Sbjct: 249 FPDRPLSLRIAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP-EFTTCEFYQAFADL 307

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLR---ICYDDAIRRY----------GTDKPDL 293
           + ++ T E++L  +  E    N   NN L    + +    RR           G   PDL
Sbjct: 308 ESLIETTESLLSTLALEVQQLNKKLNNSLSPTTVSFTGPYRRVDFIPAIEEAIGRKLPDL 367

Query: 294 RNPIIMHNVTEHFVH 308
           ++   +  V E F +
Sbjct: 368 QSDNALSQVKEIFAN 382



 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 23/39 (58%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G  +  + G+PP GG   GIDR+ ML  GA+ + +V  F
Sbjct: 486 GYLQTLEWGLPPTGGWGCGIDRLCMLFTGARRISDVLSF 524


>gi|222099867|ref|YP_002534435.1| Lysyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572257|gb|ACM23069.1| Lysyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 502

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 72/326 (22%), Positives = 133/326 (40%), Gaps = 31/326 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-- 60
           +Y     G++  S+  SF   +G V  +R HG   F  ++D  G  Q     D+   +  
Sbjct: 40  KYDHLQAGEVQESEKLSF---AGRVMSIRHHGKTAFFHLKDDTGRIQAYIRADAVGKDRM 96

Query: 61  --IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
               K V+    + + G               TG++ +  +   +LS A   PLP     
Sbjct: 97  GLFKKHVKIGDFVGVRGFPFKSK---------TGELTIYVEDFTLLSKALR-PLPEKWHG 146

Query: 119 EYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + I ++ R+L+L   D   +   KR   +  +R  + +  F+E  TPIL   +    
Sbjct: 147 IKDKEIIYRQRYLELIMSDEAIERFKKRFEAMRVIREFLNSRGFVEVETPILHYVTGGAE 206

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+    V     Y L  AP+ Y + L+  GF++ ++I   FR+E       P EF  
Sbjct: 207 ARPFVTHLNVFDVDMY-LRIAPELYLKRLIVGGFEKIYEIGKNFRNEGISYKHSP-EFTS 264

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR----------Y 286
           +++  ++ + +D++N  E ++  V +       ++     I +    RR           
Sbjct: 265 IEIYQAYADYNDMMNLTEELIVEVVKRTCGTLKITYQGKEIDFTPPWRRVRMRDFLKEKL 324

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSEFR 312
           G D  +  + +++  + EH V  E +
Sbjct: 325 GVDILEDSDEVLLKKLEEHGVEVEIK 350



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 15/40 (37%), Positives = 26/40 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           RA + GMPP GG+  G+DR+ M +  +  +R++  FP+ +
Sbjct: 446 RALEYGMPPTGGLGIGLDRLFMFITDSPTIRDIIPFPLVK 485


>gi|19921528|ref|NP_609948.1| Asparaginyl-tRNA synthetase [Drosophila melanogaster]
 gi|5901824|gb|AAD55420.1|AF181634_1 BcDNA.GH06451 [Drosophila melanogaster]
 gi|7298549|gb|AAF53768.1| Asparaginyl-tRNA synthetase [Drosophila melanogaster]
 gi|220943736|gb|ACL84411.1| Aats-asn-PA [synthetic construct]
 gi|220953642|gb|ACL89364.1| Aats-asn-PA [synthetic construct]
          Length = 558

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 116/295 (39%), Gaps = 39/295 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G ++  S V++ GWVHR+R  G  +IF+ +RD  G  Q V N D  C             
Sbjct: 130 GTANRDSRVKVYGWVHRLRRQGKSLIFITLRDGTGFLQCVLN-DQLC------------Q 176

Query: 72  CIDGLVMSRSAETI---------NANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             D L +S  +  +               G  EL+    E++ +A           E   
Sbjct: 177 TYDALTLSTESSVVLFGTLKLVPEGKTAPGGHELNVDYWELIGLAPPGGADAILNEEAQP 236

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++   R + +R +   K +  R+ +  + R    A  + E + P L  +  EG      
Sbjct: 237 DVQLDNRHIMIRGENTSKVLKMRSVVTQAFRGHYEARGYNEVTPPTLVQTQVEGGSTLFK 296

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                + ++  L Q+ Q Y +  + +  D  F I+  +R E  R+ R   E+  ++ E  
Sbjct: 297 LKYFGEEAY--LTQSSQLYLETCLPALGD-VFTISQSYRAEQSRTRRHLAEYTHVEAECP 353

Query: 243 FV--------EQDDILNTMENVLRG-----VFEEFSNGNTVSNNFLRICYDDAIR 284
           F+         +D + + ++ VL+      V E   +       F R+ Y+DAI+
Sbjct: 354 FLTFDDLLDRLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRRMNYEDAIK 408



 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R + SE +L+ +   GI  +     +    R +  G  PHGG   G+
Sbjct: 475 LLPNVGEIVGGSMRIYDSEELLKGYKREGIDPQPY--YWYTDQRVY--GTMPHGGYGLGL 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  LL   ++REV L+P   + C
Sbjct: 531 ERFLCWLLNRYHIREVCLYPRFLDRC 556


>gi|328956582|ref|YP_004373968.1| lysine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328672906|gb|AEB28952.1| lysine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 499

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/269 (21%), Positives = 118/269 (43%), Gaps = 19/269 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    D+     +E  K+      + + G +M 
Sbjct: 67  VAGRIMTKRGKGKVGFAHLQDRKGQIQIYVRKDTVGEEDYETFKNADLGDFIGVTGTIMK 126

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDT 137
                      TG++ +    I  LS A   PLP           R++ R+LDL   R++
Sbjct: 127 TD---------TGEVTIKPTSITQLSKALR-PLPDKYHGLTNVEQRYRQRYLDLISNRES 176

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
             +   KR++II  +R  +  ++++E  TP L   +    AR F+          Y L  
Sbjct: 177 FDR-FTKRSQIIREVRNYLNEQDYLEVETPTLHNLAGGAAARPFITHHNALDMELY-LRI 234

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G ++ ++I   FR+E   +   P EF  L+   ++ + +D+++ +E +
Sbjct: 235 ALELHLKRLIVGGMEKVYEIGRVFRNEGVDTTHNP-EFTMLEAYTAYTDFEDVMDLVEGL 293

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +R V +       ++ N   I  + + +R
Sbjct: 294 IRTVAQRVLGTGQITYNGQAIDLESSWKR 322



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 30/40 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + + GMPP GG+  GIDR+VMLL  A+++R+V LFP  +N
Sbjct: 459 SLEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMRN 498


>gi|307701961|ref|ZP_07638969.1| lysyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616606|gb|EFN95795.1| lysyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 496

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 153/366 (41%), Gaps = 50/366 (13%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D      ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLRGVFEEFS-------NGNTVSNN--FLRICYDDAIRR-YGTDK-PDL--- 293
           DI++  E +++   +           G  +  N  F R+   DAI+   G D  PD+   
Sbjct: 283 DIMDLTEGIIQHAAKAVKGDGPVNYQGTEIKINEPFKRVHMVDAIKEITGVDFWPDMTLE 342

Query: 294 ---------RNPIIMHNVTE--HFVHSEFRVFSKILSVNP----GYEVWAIP-AKGGGGN 337
                    + P+  H  TE  H +++ F  F +   + P    G+ V   P AK    +
Sbjct: 343 EAKAIAAEKKVPVEKH-YTEVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPED 401

Query: 338 RAFCDR 343
             F DR
Sbjct: 402 ERFTDR 407



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|317131339|ref|YP_004090653.1| asparaginyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469318|gb|ADU25922.1| asparaginyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 466

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 122/307 (39%), Gaps = 47/307 (15%)

Query: 1   MHRYRTHSCGDLGVSD--VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           MH  RT        +D    + + ++GWV  +R    I FL++ D             +C
Sbjct: 1   MHMQRTEIRDLFARADSFTAADITVAGWVRTLRHSKSIGFLELND------------GSC 48

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQK---IEILSVAEELP---- 111
           F   ++V  E  L   G VM        A ++ G++ L+ Q     E+ + + E+     
Sbjct: 49  FGHLQAVCDEQALTNFGEVMKLGVGA--AVVVRGRLALTPQARQPFELHAASVEIEGTCP 106

Query: 112 --LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
              P+  +R   E +R     L  R +TL      R+    ++        F    TPI+
Sbjct: 107 PDYPLQKKRHTLEFLR-TMPHLRPRANTLGAAFRIRSTAALAIHRFFHTHGFQYIHTPII 165

Query: 170 TASSPEGA--------RDFLVPSRVNQGS------FYALPQAPQQYKQL---LMASGFDR 212
           TAS  EGA         D   P R   G+      F+  P +     QL    MA  F +
Sbjct: 166 TASDAEGAGEMFRLTVLDIADPPRTPDGAVDFSKDFFGRPVSLTVSGQLEGESMALAFGK 225

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD----ILNTMENVLRGVFEEFSNGN 268
            +   P FR E+  + R   EF+ ++ E++F + DD      + M+ VL+ V +E  +  
Sbjct: 226 IYTFGPTFRAENSNTTRHAAEFWMVEPEIAFADLDDDRALARDMMQAVLKTVLDECPDEL 285

Query: 269 TVSNNFL 275
              N ++
Sbjct: 286 AFLNQYV 292



 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 15/89 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  EI  G  R     V+L     +G+  E         RFGG           H
Sbjct: 381 DLLVPGIGEIIGGSQREERETVLLTRMEELGMPIEAYRWYLDLRRFGGAR---------H 431

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G   G +R+VM L G  N+R+V  FP +
Sbjct: 432 AGFGLGFERLVMYLTGIGNIRDVLPFPRT 460


>gi|300362398|ref|ZP_07058574.1| lysine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300353389|gb|EFJ69261.1| lysine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 513

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 23/249 (9%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGL 76
             +++G +   R  G + F D+ D  G  Q+    D      ++I K       L IDG 
Sbjct: 60  MTKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIDGE 119

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           VM            TG++ + A  +  L+ A   PLP   +        ++ R+LDL   
Sbjct: 120 VMKTD---------TGELTIRATHVTFLAKALR-PLPNKWDGLKDVEQIYRQRYLDLI-- 167

Query: 137 TLHKN---IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSF 191
           T H++    V RT+II ++R  +  ++F+E  TP+L  + P G  AR F+          
Sbjct: 168 TNHESYMRFVHRTQIIQAIRNYLNNQDFLEVETPVL-HNIPGGAEARPFITHHNALDIDL 226

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y         K+L++  G +R ++I   FR+E   +   P EF +L+   ++ +  D+++
Sbjct: 227 YMRIALELPLKRLIVG-GMERVYEIGRVFRNEGVDTRHNP-EFTELETYAAYWDFHDVMD 284

Query: 252 TMENVLRGV 260
             E ++R  
Sbjct: 285 EAEGIIRAA 293



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 454 RAMEFGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 490


>gi|195941839|ref|ZP_03087221.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 80a]
          Length = 462

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 61/282 (21%), Positives = 113/282 (40%), Gaps = 34/282 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF--EIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F  +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +T       R +I   +        F   +TPI+T++  EGA +     RV+   F 
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMF---RVSTLKFN 182

Query: 193 ALPQAPQ-------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            L  AP                    Q      A    + +   P FR E+  + R   E
Sbjct: 183 KLNNAPSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASE 242

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           F+ ++ EM+F + +D +   E++L+ +     N  +   +FL
Sbjct: 243 FWMIEPEMAFYKLNDNIALAEDLLKYLLSSILNECSQDMDFL 284


>gi|163791063|ref|ZP_02185484.1| lysyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873708|gb|EDP67791.1| lysyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 499

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 110/244 (45%), Gaps = 19/244 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    D+   E   + +S  +   + + G +M 
Sbjct: 67  VAGRIMTKRGKGKVGFAHLQDRKGQIQIYVRKDAVGEEDYATFKSADLGDFIGVTGTIMK 126

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDT 137
                      TG++ +    +  LS A   PLP           R++ R+LDL   R++
Sbjct: 127 TD---------TGEVTIKPTSVTQLSKALR-PLPDKYHGLTNVEQRYRQRYLDLISNRES 176

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
             +   KR++II  +R  +  ++++E  TP L   +    AR F+          Y L  
Sbjct: 177 FDR-FTKRSQIIREVRNYLNEQDYLEVETPTLHNLAGGAAARPFITHHNALDMELY-LRI 234

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  L+   ++ + +D+++ +E +
Sbjct: 235 ALELHLKRLIVGGMERVYEIGRVFRNEGVDTTHNP-EFTMLEAYTAYTDFEDVMDLVEGL 293

Query: 257 LRGV 260
           +R V
Sbjct: 294 IRTV 297



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 30/40 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + + GMPP GG+  GIDR+VMLL  A+++R+V LFP  +N
Sbjct: 459 SLEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMRN 498


>gi|229542254|ref|ZP_04431314.1| lysyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229326674|gb|EEN92349.1| lysyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 495

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 124/285 (43%), Gaps = 29/285 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  I+D  G  Q     D+     +E+ KS     ++ + G V
Sbjct: 60  VAIAGRIMTKRRKGRAGFAHIQDLKGQIQFYIRQDAVGEEQYELFKSTDLGDIVGLKGTV 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
                         G++ +  ++  +L+ A   LP    G R+  +  R++ R+LDL   
Sbjct: 120 FRTKV---------GELSVKVKEFILLTKALRPLPDKFHGLRDIEQ--RYRQRYLDLIMS 168

Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
              KN  + R+RII S+R  +    ++E  TP++ A +    AR F+          Y +
Sbjct: 169 EESKNTFITRSRIIQSIRNYLDKNGYLEVETPMMHAIAGGAAARPFITHHNALDIDLY-M 227

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G ++ ++I   FR+E   +   P EF  L++  ++ + +DI+   E
Sbjct: 228 RIAIELHLKRLIVGGLEKVYEIGRVFRNEGIDTRHNP-EFTMLELYEAYADFNDIMQLTE 286

Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY-GTD 289
           N++    +E     T+            + R+   DAI+ Y G D
Sbjct: 287 NMIVHTAKEVLGTTTIRYGEHEVNLEPEWRRLHMVDAIKEYTGVD 331



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 30/40 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GG+  G+DR+VMLL  A ++R+V LFP+ ++
Sbjct: 454 ALEYGMPPTGGLGIGVDRLVMLLTNAPSIRDVLLFPLMKS 493


>gi|254447176|ref|ZP_05060643.1| lysyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198263315|gb|EDY87593.1| lysyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 500

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 97/197 (49%), Gaps = 7/197 (3%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIIN 150
           G + +S ++ E+L+ +   PLP   +       R++ R++DL  +   + + + R++II 
Sbjct: 130 GDLYVSMERAELLTKSLR-PLPDKHKGLSDTEQRYRQRYVDLIVNEESRKVFRLRSQIIQ 188

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            +R  +   +F E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 189 YIRRYLDGRDFQEVETPMMQVI-PGGATARPFVTHHNALDMDLY-LRIAPELYLKRLVVG 246

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GF+R ++I   FR+E   +   P EF  L+   ++ +  D+++  E++LRG+ E+     
Sbjct: 247 GFERVYEINRNFRNEGLSTRHNP-EFTMLEFYQAYADYHDLMDLTESMLRGIAEDVIGST 305

Query: 269 TVSNNFLRICYDDAIRR 285
           T+     +  ++ A  R
Sbjct: 306 TIEAEGEQYDFEKAFAR 322



 Score = 45.1 bits (105), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G E+A+G    + +E   + F      K+  ++    +   Y RA + G+PP 
Sbjct: 409 RFEFFVGGREVANGFSELNDAEDQAERFKAQVAEKDAGDDEAMHYDADYIRALEYGLPPT 468

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML   + ++R+V LFP
Sbjct: 469 AGEGIGIDRLVMLFTDSASIRDVLLFP 495


>gi|218901279|ref|YP_002449113.1| lysyl-tRNA synthetase [Bacillus cereus AH820]
 gi|226737089|sp|B7JK84|SYK_BACC0 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|218535399|gb|ACK87797.1| lysyl-tRNA synthetase [Bacillus cereus AH820]
          Length = 499

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 72/330 (21%), Positives = 141/330 (42%), Gaps = 50/330 (15%)

Query: 5   RTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RT++  DL +S  G F           V ++G +   R  G   F  I+D +G  Q+   
Sbjct: 37  RTNATNDL-LSLYGEFSKEELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVR 95

Query: 54  PDSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EE 109
            D+     +E+ K+     ++ I+G V   +          G++ + A    +L+ +   
Sbjct: 96  KDAVGDEEYELFKTADLGDLVGIEGKVFKTNV---------GELSVKATGFTLLTKSLRP 146

Query: 110 LPLPVFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           LP    G ++  +  R++ R+LDL      R+T     V R++II  MR  +    ++E 
Sbjct: 147 LPDKYHGLKDVEQ--RYRQRYLDLITSMESRETF----VTRSKIIREMRRYLDDNGYLEV 200

Query: 165 STPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP++ A +    AR F+          Y +  A + + + L+  G ++ ++I   FR+E
Sbjct: 201 ETPMMHAIAGGASARPFITHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NF 274
              +   P EF  +++  ++ +  DI+   EN++  + ++     T+            +
Sbjct: 260 GVSTRHNP-EFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPKW 318

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            R+   DAI+ +     D  NP+ +    E
Sbjct: 319 TRLHMVDAIKEHSG--ADFWNPMSVEEARE 346



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|3980155|emb|CAA43736.1| unnamed protein product [Mycoplasma genitalium]
          Length = 83

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 2/69 (2%)

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQYDLVCNG 488
           N + FCW++DFP Y+++E+  +    HN F+ P Q  +++ + N   ++   Q+DLV NG
Sbjct: 4   NQYSFCWVVDFPLYDFDEKTNQWISNHNIFSKPKQEWIDNFESNKNEALSE-QFDLVLNG 62

Query: 489 FEIASGGIR 497
           FEI SG IR
Sbjct: 63  FEIGSGSIR 71


>gi|152964545|ref|YP_001360329.1| lysyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189082961|sp|A6W5H6|SYK_KINRD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|151359062|gb|ABS02065.1| lysyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 500

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 9/170 (5%)

Query: 85  INANIIT---GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHK 140
           ++ N+I+   G++ + A    + S +   PLPV   +E  E  R + R++DL  R+    
Sbjct: 121 VHGNVISSRRGELSVLADSWRMASKSLR-PLPVL-HKELSEETRVRQRYVDLIVREAART 178

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           N+  R+ ++ ++R  +    F+E  TP+L T      AR F+  S       Y L  AP+
Sbjct: 179 NVRARSNVVRALRRTLEDRGFLEVETPMLQTLHGGASARPFVTRSNAFDTELY-LRIAPE 237

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            + +  +  G +R F+I   FR+E   S   P EF  L+   ++ + D I
Sbjct: 238 LFLKRCVVGGIERVFEINRNFRNEGADSTHSP-EFAMLETYQAWGDYDSI 286



 Score = 44.3 bits (103), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 18/129 (13%)

Query: 448 EEKKIDFAHNPFTMPQGGMES---LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
           E +  D  H+P  +    +E+   ++G+  L     ++DL   GFE+A+G   + + + +
Sbjct: 374 EHRIADSLHSPTFVRDFPVETSPLVRGHRELPGVVEKWDLYVRGFELATG--YSELVDPV 431

Query: 505 LQA--------FSNVGISKEV-VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           +Q          +++G  + + ++  F    RA + GMPP GG+  GIDR++M L G   
Sbjct: 432 VQRERFVEQARLADLGDDEAMRIDEDF---LRAQEHGMPPTGGMGMGIDRLLMALTGL-G 487

Query: 556 VREVSLFPM 564
           +RE   FP+
Sbjct: 488 IRETITFPL 496


>gi|319891471|ref|YP_004148346.1| class II Lysyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161167|gb|ADV04710.1| class II Lysyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 495

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 53/261 (20%), Positives = 120/261 (45%), Gaps = 19/261 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACF 59
           ++  ++  +L   +  S   ++G +   R  G   F  ++D  G  Q+    D    A F
Sbjct: 43  QWDQYAKEELAEKETESHTVIAGRIMTKRGKGKAGFAHVQDLSGQIQIYVRKDQVGDAQF 102

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER 118
            I  +     ++ ++G++   +         TG++ + A+  ++LS A   LP    G +
Sbjct: 103 GIWNTADLGDIVGVEGIMFKTN---------TGELSVKAKSFKLLSKALRPLPDKHHGLQ 153

Query: 119 EYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
           +  +  R++ R+LDL   +   +  + R+RI+  MR  +  + F+E  TP++   +    
Sbjct: 154 DIEQ--RYRQRYLDLITNEESTQTFINRSRILQEMRNYLNEKGFLEVETPMMHQIAGGAA 211

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F+        + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  
Sbjct: 212 AKPFVTHHNALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTM 269

Query: 237 LDMEMSFVEQDDILNTMENVL 257
           +++  ++ +  DI++  E ++
Sbjct: 270 IELYEAYADYKDIMSLTEELV 290



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFP 490


>gi|307165837|gb|EFN60200.1| Lysyl-tRNA synthetase [Camponotus floridanus]
          Length = 585

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 26/249 (10%)

Query: 23  LSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP------DSACFEIAKSVRSEWVLCIDG 75
           ++G VH +R  G  ++F D+R      Q++AN       D    + AK  R + +  I  
Sbjct: 117 VAGRVHAIRESGSKLVFYDLRGEGVKLQIMANAKLYQCQDLFVRDTAKIKRGDIIGVIGY 176

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL- 133
              S+          TG+  +    I +LS     LP   +G ++     RF+ R+LDL 
Sbjct: 177 PAKSK----------TGEFSIIPSSIILLSPCLHMLPHLHYGLKD--RETRFRQRYLDLI 224

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSF 191
             D + +    R RII  +R  +    F+E  TP++    P GA  + F+          
Sbjct: 225 LNDKVRRIFHIRARIIAYIRKFLDNMGFLEVETPMMNMI-PGGATAKPFITHHNELNKDL 283

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  +++ + +D++ 
Sbjct: 284 Y-MRIAPELYLKMLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYIAYADYNDLME 341

Query: 252 TMENVLRGV 260
             EN++ G+
Sbjct: 342 ITENMISGM 350



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L    N++EV LFP
Sbjct: 523 ALEYGLPPTAGWGLGIDRLTMFLTDTNNIKEVLLFP 558


>gi|88704508|ref|ZP_01102222.1| asparaginyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88701559|gb|EAQ98664.1| asparaginyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 465

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 116/310 (37%), Gaps = 49/310 (15%)

Query: 16  DVGSFVRLSGWVHRVR-PHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLC 72
           D G  V + GW+   R    GI FL I D   +   Q V   +   +E      SE +  
Sbjct: 16  DEGGEVAVRGWLRSKRDSKAGISFLAIHDGSSFDAIQAVVPAELENYE------SEILAL 69

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFL 131
             G  +      + +      +E+ A ++ +L  V +    PV  +R   E +R +   L
Sbjct: 70  NTGCSVEVKGNLVPSQGKGQSVEIQASEVRVLGWVDDPETYPVAKKRHTFEYLRTQAH-L 128

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
             R +T       R  + N++        F   +TPI+T S  EGA +    S ++  + 
Sbjct: 129 RPRTNTFGAITRVRHTLANAVHSYFHDNGFYWVNTPIITGSDCEGAGELFRVSTLDMSNI 188

Query: 192 YALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEF 234
              P     Y Q        L  SG            + +   P FR E+  + R   EF
Sbjct: 189 PRTPDGAVDYTQDFFGGDAFLTVSGQLAVESYCLSMSKVYTFGPTFRAENSNTSRHLAEF 248

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------------GNT--------VSNN 273
           + ++ E++F +  D  +  E++L+ VF    N              NT        V  N
Sbjct: 249 WMIEPEVAFADLADNADLAESLLKYVFRRVLNECEDDLAFFNQRIDNTVIDRLTAMVDQN 308

Query: 274 FLRICYDDAI 283
           F R+ Y DAI
Sbjct: 309 FERMDYSDAI 318


>gi|307705122|ref|ZP_07641999.1| lysyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307621318|gb|EFO00378.1| lysyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 496

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 112/251 (44%), Gaps = 19/251 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D      ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLR 258
           DI++  E +++
Sbjct: 283 DIMDLTEGIIQ 293



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|163785669|ref|ZP_02180205.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879065|gb|EDP73033.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 76

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 3/61 (4%)

Query: 11 DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRS 67
          DL  +++G  VRL GW   VR HGG+IF+++RD  G  QVV +P  +  E+   AK VR+
Sbjct: 16 DLTENNIGDEVRLLGWAESVRDHGGVIFINLRDREGTIQVVFDPSKSPQEVVEKAKKVRT 75

Query: 68 E 68
          E
Sbjct: 76 E 76


>gi|54020381|ref|YP_115687.1| lysyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|53987554|gb|AAV27755.1| lysine--tRNA ligase [Mycoplasma hyopneumoniae 232]
          Length = 556

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 7/178 (3%)

Query: 91  TGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRI 148
           TGQ+ +      +L+ +   LP   +G  E P+  +++ R+LDL  ++      + R++I
Sbjct: 184 TGQLSIKVNNFSLLTKSLHPLPDQYYG-IENPDE-KYRKRYLDLLVNSESAKTFRLRSKI 241

Query: 149 INSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I+ +R    ++ F+E  TP+L        A+ F+        +FY         K+LL+A
Sbjct: 242 ISLIRTFFDSQGFLEVDTPVLQPVLGGASAKPFITYYNSLSQNFYLRIATELPLKKLLVA 301

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
            GFDR ++I   FR+E   S   P EF  ++   ++   + I++  EN+ R +FE+ +
Sbjct: 302 -GFDRVYEIGKIFRNEGFDSTHNP-EFTSIEFYQAYANLEKIMDQTENLFRFLFEKLN 357



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + GMPP GG   GIDR+ MLL   +++REV LFP
Sbjct: 513 QALEYGMPPAGGCGIGIDRLTMLLTKNESIREVILFP 549


>gi|110003925|emb|CAK98265.1| lysyl-trna synthetase protein [Spiroplasma citri]
          Length = 500

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/278 (21%), Positives = 126/278 (45%), Gaps = 13/278 (4%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L  S     V+++G +   R  G   F  ++D  GI Q+    D    E+      E++ 
Sbjct: 54  LATSSDNMTVKIAGRIKTFREVGKASFATVQDQNGIFQIYVRND----EVGDEKYQEFIN 109

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRF 130
              G ++  +   +  N  TG++ +  ++  +L+ A   LP    G  +  E  +++ R+
Sbjct: 110 FDLGDIIGVTGIMMKTN--TGELTVRVKEFVLLAKALRALPDKYRGMTDIEE--KYRRRY 165

Query: 131 LDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           +DL   T  K+I +KR++II  MR    ++ ++E  TP+L        A+ F+       
Sbjct: 166 VDLITSTETKDIFIKRSKIIALMRDFFNSKGYLEVETPVLQPIHGGAAAKPFVTHHNTLD 225

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FY L  A +   + L+  GF+  +++   FR+E   +   P EF  +++ +++ + + 
Sbjct: 226 MDFY-LRVATELPLKRLIVGGFEGVYEMGRLFRNEGMDTRHNP-EFTTVEIYVAYQDMNF 283

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           ++   E+ +  + +   N N    + + I +    +R+
Sbjct: 284 MMQLTEDTICYIAKNILNKNETEYDGVMISFQQPWKRW 321



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL G  ++++V LFP
Sbjct: 458 ALEYGMPPTGGLGIGIDRLVMLLTGQDSIKDVLLFP 493


>gi|70605917|ref|YP_254787.1| lysyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|76363439|sp|Q4JCI5|SYK_SULAC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|68566565|gb|AAY79494.1| lysyl-tRNA synthetase type II [Sulfolobus acidocaldarius DSM 639]
          Length = 500

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 140/315 (44%), Gaps = 31/315 (9%)

Query: 2   HRYR-THSCGDLGV-------SDVGSF-VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           H+Y  TH+  D+         +D  +F +  +G V  +R HG I F+DI D     Q+  
Sbjct: 32  HKYDITHTIIDIKKMERSDKPTDAFAFDISTAGRVANIRRHGKISFVDIFDEGERLQLQL 91

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
             +    E+       + +   G ++    + +    I G++ L  +   +LS  + L  
Sbjct: 92  RVN----ELGDRYDKFFEIVDRGDILGVKGDLLYT--IKGELTLRIKDYVLLS--KSLIE 143

Query: 113 PVFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
           P    +  PE  R+ +R++D L  D   +N+  R   I  +R  + ++ F+E  TPIL  
Sbjct: 144 PPDWSKLSPE-FRYAHRYVDFLYNDLARRNMEIRYSTIRRIREFLYSKGFMEVETPILQP 202

Query: 172 SSPEG-ARDFLVPSRVNQ-GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                 A+ F+  S VN     + L  + + Y +  +  GF++ F+I   FR+ED     
Sbjct: 203 VYGGALAKPFM--SHVNYLNENWYLRISLELYLKRYIVGGFNKVFEIGKVFRNEDIDVTH 260

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  L++  ++ + +DI+   E +L+ V +  +N +       +I Y    + Y  +
Sbjct: 261 NP-EFTLLELYWAYADYNDIMRLTEEMLQDVVKNINNDS-------KIKYSIGGKEYTIE 312

Query: 290 KPDLRNPIIMHNVTE 304
               R   ++ ++TE
Sbjct: 313 FSQFRKITMIDSLTE 327



 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA   GMPP GG+  GIDR++MLL    +++E+  +PM
Sbjct: 454 RALSYGMPPTGGLGIGIDRLIMLLTNNMSIKEIIPYPM 491


>gi|67516293|ref|XP_658032.1| hypothetical protein AN0428.2 [Aspergillus nidulans FGSC A4]
 gi|40747371|gb|EAA66527.1| hypothetical protein AN0428.2 [Aspergillus nidulans FGSC A4]
 gi|259489326|tpe|CBF89504.1| TPA: lysyl-tRNA synthetase, hypothetical protein (Eurofung)
           [Aspergillus nidulans FGSC A4]
          Length = 527

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 18/183 (9%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           K I  R+ I   +R  ++ ++F+E STPIL    P GA  R F   +        AL  A
Sbjct: 195 KVIKSRSLITQHIRQFLLDKSFMEVSTPILNGI-PGGASARPFYTSATEFPDRQLALRIA 253

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ + + L+  GFDR F+I P FR+E       P EF   +   ++   ++++NT E +L
Sbjct: 254 PELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP-EFTTCEFYQAYSNLEELMNTTEELL 312

Query: 258 RGVFEEF-----------SNGNTVSNNFLRICYDDAIRRYGTDK--PDLRNPIIMHNVTE 304
            G+ + F                 +  F RI +   I   G D+  PDL  P  +  VT+
Sbjct: 313 CGLAQVFIAEFNKRKEPPPTAIDFTIPFHRIDFITGI-ELGIDRQLPDLTAPDSLEQVTQ 371

Query: 305 HFV 307
            F 
Sbjct: 372 IFT 374



 Score = 40.8 bits (94), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 22/36 (61%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           RA + G+PP GG   GIDR+VML    K + EV  F
Sbjct: 483 RALEWGLPPTGGWGCGIDRLVMLFTKVKKIAEVLPF 518


>gi|307706787|ref|ZP_07643592.1| lysyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617872|gb|EFN97034.1| lysyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 496

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 112/251 (44%), Gaps = 19/251 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D      ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLR 258
           DI++  E +++
Sbjct: 283 DIMDLTEGIIQ 293



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|229135391|ref|ZP_04264180.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228648087|gb|EEL04133.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 463

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 70/323 (21%), Positives = 126/323 (39%), Gaps = 61/323 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V     ++
Sbjct: 21  VQVSGWIRNLRDSKAFGFIELNDGSFFKGVQIVFDTELENFKEIAKLPLSSSVKVEGKVI 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A+KI+I  +++    P+  +R   E +R       LR  T
Sbjct: 81  ATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHLRPRT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              +   R R I +       +   F+   TPI+T S  EGA +     RV       +P
Sbjct: 129 NAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDLNNVP 185

Query: 196 QAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           +                       Q      A  F   +   P FR E+  + R   EF+
Sbjct: 186 KGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFW 245

Query: 236 QLDMEMSFVEQDDILNTMENVLR--------------GVFEEFSN-------GNTVSNNF 274
            ++ E++F E  D+++  E++L+                F  F +        N ++++F
Sbjct: 246 MVEPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVINSDF 305

Query: 275 LRICYDDAIRRYGTDKPDLRNPI 297
            RI Y +AI+       + + P+
Sbjct: 306 GRITYTEAIKVLQESGAEFKYPV 328


>gi|111020719|ref|YP_703691.1| lysyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|123046073|sp|Q0SAA3|LYSX_RHOSR RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|110820249|gb|ABG95533.1| lysine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 1114

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 106/226 (46%), Gaps = 21/226 (9%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+  +   S  G+ VR++G + R+R +GG++F  +RD  G  Q++ +      +  ++ 
Sbjct: 659 SHTVTEAVESPEGTTVRIAGRLLRIRDYGGVVFAVVRDWSGDIQILVDEARVGTDRIRAF 718

Query: 66  RSEWVLC----IDGLV--MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
            +E+ L     + G++    R A ++ AN    +  ++ + +         PLP   +  
Sbjct: 719 AAEFDLGDLVEVAGVIGYSRRGALSLLAN----EWRMTGKCLH--------PLPDKWKGL 766

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGA 177
                R + R++DL  ++  + +++ R+ ++ S+R  +    F+E  TPIL        A
Sbjct: 767 SDPETRVRQRYVDLAINSDARRLLEARSAVVKSLRDSLGGRGFLEVETPILQQVHGGANA 826

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             FL          Y L  AP+ Y + L  +G ++ F+I   FR+E
Sbjct: 827 APFLTHINAYNLDLY-LRIAPELYLKRLCVAGMEKVFEIGRVFRNE 871



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           RN ++E  + A      + E+ E+      +A +
Sbjct: 1021 AAKWDLVAWGVELGTAYSELTDPVDQRNRLTEQSMLAAGGDEEAMELDED----FLQALE 1076

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  G+DR+VML+ G  ++RE   FP+++
Sbjct: 1077 HAMPPTGGLGMGVDRVVMLITGG-SIRETLAFPLAK 1111


>gi|320547204|ref|ZP_08041498.1| lysine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320448191|gb|EFW88940.1| lysine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 500

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 119/278 (42%), Gaps = 19/278 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + ++     ++G +   R  G + F  I+D  G  Q+    D+     ++I K       
Sbjct: 60  LHEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRKDAVGDENYQIFKKADLGDF 119

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L I+G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 120 LGIEGEVMRTD---------MGELTIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 168

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +    F+E  TP+L   +   A    V     
Sbjct: 169 YLDLISNRESFDR-FVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAARPFVTHHNA 227

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 228 QDMDMVLRIALELHLKRLIVGGMEKVYEIGRVFRNEGMDATHNP-EFTMIELYQAYADFK 286

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           DI++  E +++      +    ++     I  D   +R
Sbjct: 287 DIMDITEGIIQNASAAVNGNGPITYQGTEIAIDKPFKR 324



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+  
Sbjct: 435 LARFEAQAKAKELGDDEATGVDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDAL 494

Query: 561 LFP 563
           LFP
Sbjct: 495 LFP 497


>gi|261327549|emb|CBH10525.1| asparaginyl-trna synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 746

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 103/253 (40%), Gaps = 15/253 (5%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           GDL     G  V + GW HRVR    I F+ +RD  G  QVV   ++  F        E 
Sbjct: 307 GDLPKCKEGEIVHVIGWAHRVRHQSRISFVVLRDGSGYIQVVFGGETEPF------HRET 360

Query: 70  VLCIDG-LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            L I G L     AET     +    EL  ++  I+  ++     V      P+ +    
Sbjct: 361 SLAIRGRLKHEPKAET----ELQPPYELHVEEYAIIGNSDGSIENVITAESSPDKL-LDD 415

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R L +R       +  R  +I + R    ++   E + P L  +  EG         +  
Sbjct: 416 RHLVIRGTYGSTTLKVRHELIRAFREYFWSKGMYEVTPPTLVGTQCEGGSTLF--DVMYY 473

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G    L Q+ Q Y +   AS  D Y  ++  +R E  ++ R   E+  L++E +    ++
Sbjct: 474 GKKAYLTQSSQLYLEACTASLGDVYCLLS-SYRAEKSKTKRHLSEYTHLEVEYAVCNFEE 532

Query: 249 ILNTMENVLRGVF 261
           +L  +E+++  VF
Sbjct: 533 MLTYIEDLIVSVF 545



 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D++  G  E+  G +R    + +++A+   G+  EV    +       + G  PHGG   
Sbjct: 661 DVLAPGIGEVVGGSMRMWDYDELMEAYKREGLDPEV----YYWYTEQRKYGSTPHGGFGL 716

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G++R+++ LL   +VR+  LFP     C
Sbjct: 717 GLERLLVWLLDLDSVRDACLFPRYMGRC 744


>gi|332307385|ref|YP_004435236.1| lysyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174714|gb|AEE23968.1| lysyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 517

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 120/268 (44%), Gaps = 26/268 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            + ++G  V ++G +   R      FL ++D  G  Q  A+ D+      K +++ +   
Sbjct: 55  ALEELGKVVSIAGRILAKRGP----FLLLQDMTGRIQAYASKDTQ-----KDIKARYTSL 105

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G ++    E   +    G + ++  + ++L+ +   PLP        +  +++ R++D
Sbjct: 106 DIGDIIGVKGELHKSG--KGDLYVNMSEYQLLTKSLR-PLPEKFHGLADQETKYRQRYVD 162

Query: 133 L-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSR 185
           L      RDT     + R++I+  +R  +    F+E  TP+L    P GA  + F     
Sbjct: 163 LITNQQTRDTF----MIRSKIVTGIRNFLSERKFMEVETPMLQVI-PGGATAKPFTTHHN 217

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  L+   ++ +
Sbjct: 218 ALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMLEFYQAYAD 275

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN 273
             D++N  E +LR V ++    + V N 
Sbjct: 276 YQDLMNLTEEMLRSVAQDVLGTSIVKNT 303



 Score = 44.7 bits (104), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 11/91 (12%)

Query: 484 LVCNGFEIASGG--IRNHMSEVMLQAFSNVGISKEVVENRFGG---------LYRAFQCG 532
            V + FE   GG  + N  SE+           K+V E   G            RA + G
Sbjct: 415 FVTDRFEFFVGGRELANGFSELNDSEDQEARFRKQVAEKDAGDDEAMHFDDDYIRALEYG 474

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +PP  G   GIDR+VML   +  +++V LFP
Sbjct: 475 LPPTAGEGIGIDRLVMLFTDSPTIKDVILFP 505


>gi|227894509|ref|ZP_04012314.1| lysine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227863668|gb|EEJ71089.1| lysine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 520

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 114/248 (45%), Gaps = 23/248 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      ++I K       L I+G V
Sbjct: 66  TKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIEGEV 125

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--R 134
           M            TG++ + A  +  LS A   LP    G ++  E+I ++ R+LDL   
Sbjct: 126 MKTD---------TGELTIRALHVTFLSKALRPLPDKYHGLKDV-EAI-YRQRYLDLITN 174

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
           RD+ +   V RT+II ++R  +  ++F+E  TP+L  + P G  AR F+          Y
Sbjct: 175 RDS-YMRFVHRTQIIQAIRDYLNGQDFLEVETPVL-HNIPGGAEARPFITHHNALDIDLY 232

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
                    K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++ 
Sbjct: 233 MRIALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDFHDVMDE 290

Query: 253 MENVLRGV 260
            E ++R  
Sbjct: 291 AEGIIRAA 298



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 459 RAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 495


>gi|126653301|ref|ZP_01725412.1| lysyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589975|gb|EAZ84104.1| lysyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 500

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 114/257 (44%), Gaps = 19/257 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  I+D  G  Q+    D      +E+ K      ++ I G V
Sbjct: 64  VIIAGRIMTKRGKGKAGFAHIQDLGGQIQIYVRQDHVGEEAYELFKQADLGDIVGIRGNV 123

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
                         G++ + A++   L+ A   +P    G ++  +  R++ R+LDL  +
Sbjct: 124 FRTQV---------GELSVKAEEFTFLTKALRPMPEKFHGLQDVEQ--RYRQRYLDLMTN 172

Query: 137 TLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
              K   + R++II ++R  +    ++E  TP+L T +    AR F+          Y +
Sbjct: 173 EESKLTFIARSKIIRAIRNYLDNSGYLEVETPMLHTIAGGAAARPFITHHNALDMELY-M 231

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++  E
Sbjct: 232 RIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP-EFTMIELYEAYADYQDIMSLTE 290

Query: 255 NVLRGVFEEFSNGNTVS 271
           N++  V +E     TV 
Sbjct: 291 NLIAHVAQEVLGTTTVQ 307



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 29/42 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           A + GMPP GG+  GIDR++MLL  + ++R+V LFP  ++  
Sbjct: 458 ALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLFPTMRHIT 499


>gi|329898899|ref|ZP_08272497.1| Asparaginyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328920707|gb|EGG28179.1| Asparaginyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 468

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 72/315 (22%), Positives = 116/315 (36%), Gaps = 61/315 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           VG+ VR+ GW+   R    GI FL I D             +CF+  ++V         S
Sbjct: 20  VGTIVRVQGWLRSKRDSKAGISFLAIHD------------GSCFDTIQAVVPAELDNYES 67

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRF 126
           E      G  +      + +      +E+ A ++ ++  V +    P+  +R   E +R 
Sbjct: 68  EVKKLSTGCAVDVCGTLVQSEGKGQALEIQATQVIVVGDVDDPEGYPIAKKRHTFEYLRT 127

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           +   L  R +T       RT + N++        F   +TPI+T S  EGA +    S +
Sbjct: 128 QAH-LRPRTNTFGAITRVRTTLANAIHQFFFDHGFHWINTPIITGSDCEGAGELFRVSTL 186

Query: 187 NQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDR 229
           +  +     Q    YKQ        L  SG            + +   P FR E+  + R
Sbjct: 187 DMVNTPKNAQGQVDYKQDFFEQEAFLTVSGQLEVESYCLAMSKVYTFGPTFRAENSNTSR 246

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GN 268
              EF+ ++ E++F    D  +  E +L+ VF    N                      N
Sbjct: 247 HLAEFWMIEPEVAFANLADNADLAEALLKHVFTRVMNEREDDMAFFNQRIDTTVLERLTN 306

Query: 269 TVSNNFLRICYDDAI 283
            +   F RI Y DAI
Sbjct: 307 VIEQPFERIDYTDAI 321


>gi|172038375|ref|YP_001804876.1| lysyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171699829|gb|ACB52810.1| lysyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 573

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 67/315 (21%), Positives = 136/315 (43%), Gaps = 41/315 (13%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV----------VANPDSACFEIAKSV 65
           +V   V ++G +   R  G + F +++D  G  Q+          +++ DSA   + K  
Sbjct: 63  EVAVDVAIAGRIIARRVFGKLAFFNLQDETGTIQLYLDKKEIQAHMSDLDSAFNHLKKLT 122

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +  ++ + G +              G++ +  ++ +IL+ +  LPLP           R
Sbjct: 123 DTGDIIGVKGSIKRTEK---------GELSVKVKQYQILTKSL-LPLPDKWHGLTDTEKR 172

Query: 126 FKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
           ++ R++DL  +  + +   +R  I  S+R  +  + FIE  TP+L + +    AR F+  
Sbjct: 173 YRQRYVDLIVNPQVRQTFRRRAEITASIRRYLDKQGFIEIETPVLQSEAGGAEARPFITY 232

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               +   Y L  A + + + L+  GF++ F++   FR+E   +   P EF  +++  ++
Sbjct: 233 HNTLEMDLY-LRIATELHLKRLIVGGFEKVFELGRIFRNEGVSTKHNP-EFTSIEVYQAY 290

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMH 300
            + +D++   E ++    EE           L+I Y       G D  DL  P   + MH
Sbjct: 291 ADYNDMMELTEAIITTAAEEVLGT-------LKITYQ------GED-IDLSTPWRRVTMH 336

Query: 301 NVTEHFVHSEFRVFS 315
           ++ +     +F  F 
Sbjct: 337 DIVKEKSGLDFEQFK 351



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 30/42 (71%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           A + GMPP GG+  GIDR++MLL  + ++R+V  FP+ +N+ 
Sbjct: 470 ALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIAFPLLKNYS 511


>gi|30260268|ref|NP_842645.1| lysyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47525330|ref|YP_016679.1| lysyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183111|ref|YP_026363.1| lysyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49481679|ref|YP_034430.1| lysyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52145139|ref|YP_081689.1| lysyl-tRNA synthetase [Bacillus cereus E33L]
 gi|65317538|ref|ZP_00390497.1| COG1190: Lysyl-tRNA synthetase (class II) [Bacillus anthracis str.
           A2012]
 gi|118475848|ref|YP_892999.1| lysyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|165872546|ref|ZP_02217178.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167635062|ref|ZP_02393379.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167641503|ref|ZP_02399751.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170688911|ref|ZP_02880113.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170707537|ref|ZP_02897990.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177655622|ref|ZP_02936985.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190568953|ref|ZP_03021854.1| lysyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196036416|ref|ZP_03103813.1| lysyl-tRNA synthetase [Bacillus cereus W]
 gi|196041753|ref|ZP_03109043.1| lysine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196047399|ref|ZP_03114612.1| lysyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225862130|ref|YP_002747508.1| lysyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227812751|ref|YP_002812760.1| lysyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228912816|ref|ZP_04076464.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228925330|ref|ZP_04088427.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931579|ref|ZP_04094486.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943883|ref|ZP_04106269.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229089208|ref|ZP_04220490.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229119739|ref|ZP_04249001.1| Lysyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229182471|ref|ZP_04309723.1| Lysyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|229604711|ref|YP_002864729.1| lysine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254682296|ref|ZP_05146157.1| lysyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254724218|ref|ZP_05186003.1| lysyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254735479|ref|ZP_05193187.1| lysyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744619|ref|ZP_05202298.1| lysyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254756324|ref|ZP_05208353.1| lysyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254762380|ref|ZP_05214222.1| lysyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|300119172|ref|ZP_07056873.1| lysyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|39932145|sp|Q81VW3|SYK_BACAN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81397490|sp|Q6HPU0|SYK_BACHK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81689861|sp|Q63HC2|SYK_BACCZ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229793|sp|A0R8E9|SYK_BACAH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|30253589|gb|AAP24131.1| lysine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47500478|gb|AAT29154.1| lysyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177038|gb|AAT52414.1| lysyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49333235|gb|AAT63881.1| lysine--tRNA ligase (lysyl-tRNA synthetase) [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|51978608|gb|AAU20158.1| lysine--tRNA ligase (lysyl-tRNA synthetase) [Bacillus cereus E33L]
 gi|118415073|gb|ABK83492.1| lysine--tRNA ligase [Bacillus thuringiensis str. Al Hakam]
 gi|164711674|gb|EDR17219.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510488|gb|EDR85886.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167529536|gb|EDR92286.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170127533|gb|EDS96407.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170667135|gb|EDT17896.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172080033|gb|EDT65132.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190559877|gb|EDV13861.1| lysyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|195991046|gb|EDX55017.1| lysyl-tRNA synthetase [Bacillus cereus W]
 gi|196021801|gb|EDX60495.1| lysyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196027373|gb|EDX65990.1| lysine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|225790233|gb|ACO30450.1| lysine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227006353|gb|ACP16096.1| lysine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228601051|gb|EEK58619.1| Lysyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228663764|gb|EEL19342.1| Lysyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228694171|gb|EEL47852.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228815840|gb|EEM62075.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228828131|gb|EEM73858.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834377|gb|EEM79917.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228846876|gb|EEM91880.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229269119|gb|ACQ50756.1| lysine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|298723494|gb|EFI64235.1| lysyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 499

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 72/330 (21%), Positives = 141/330 (42%), Gaps = 50/330 (15%)

Query: 5   RTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RT++  DL +S  G F           V ++G +   R  G   F  I+D +G  Q+   
Sbjct: 37  RTNATNDL-LSLYGEFSKEELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVR 95

Query: 54  PDSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EE 109
            D+     +E+ K+     ++ I+G V   +          G++ + A    +L+ +   
Sbjct: 96  KDAVGDEEYELFKTADLGDLVGIEGKVFKTNV---------GELSVKATGFTLLTKSLRP 146

Query: 110 LPLPVFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           LP    G ++  +  R++ R+LDL      R+T     V R++II  MR  +    ++E 
Sbjct: 147 LPDKYHGLKDVEQ--RYRQRYLDLITSMESRETF----VTRSKIIREMRRYLDDNGYLEV 200

Query: 165 STPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP++ A +    AR F+          Y +  A + + + L+  G ++ ++I   FR+E
Sbjct: 201 ETPMMHAIAGGASARPFITHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NF 274
              +   P EF  +++  ++ +  DI+   EN++  + ++     T+            +
Sbjct: 260 GVSTRHNP-EFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEW 318

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            R+   DAI+ +     D  NP+ +    E
Sbjct: 319 TRLHMVDAIKEHSG--ADFWNPMSVEEARE 346



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|225552442|ref|ZP_03773382.1| asparaginyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371440|gb|EEH00870.1| asparaginyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 462

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 107/265 (40%), Gaps = 34/265 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF--EIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F  +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +T       R +I   +        F   +TPI+T++  EGA +     RV+   F 
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMF---RVSTLKFN 182

Query: 193 ALPQAPQ-------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            L  AP                    Q      A    + +   P FR E+  + R   E
Sbjct: 183 KLNNAPSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASE 242

Query: 234 FYQLDMEMSFVEQDDILNTMENVLR 258
           F+ ++ EM+F + +D +   E++L+
Sbjct: 243 FWMIEPEMAFYKLNDNIALAEDLLK 267


>gi|169627648|ref|YP_001701297.1| lysyl-tRNA synthetase (LysS) [Mycobacterium abscessus ATCC 19977]
 gi|169239615|emb|CAM60643.1| lysyl-trna synthetase (LysS) [Mycobacterium abscessus]
          Length = 500

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 18/256 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEWVLCI 73
           +  G  V +SG V   R  G + F  +++  G + QV+ +       + +   ++W   +
Sbjct: 56  TSTGDQVGVSGRVIFSRNTGKLCFATLQEGDGTSLQVMIS----LAGVGEQSLADWKTDV 111

Query: 74  D-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           D G ++    E I++    G++ + A + ++ S +   PLPV   +E  E  R + R++D
Sbjct: 112 DLGDIVFVHGEVISSR--RGELSVMADRWQMASKSLR-PLPV-AHKEMSEETRVRQRYVD 167

Query: 133 LRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGS 190
           L      + I + R  ++ ++R  M   +F+E  TPIL T +    AR F+  S      
Sbjct: 168 LIVRPEARQIARQRVAVMRAIRDAMHRRDFLELETPILQTLAGGAAARPFITHSNALDID 227

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ + +  +  GFD+ F++   FR+E   S   P EF  L+   ++   D   
Sbjct: 228 LY-LRIAPELFLKKALVGGFDKIFELNRVFRNEGADSTHSP-EFVMLETYETYGTYD--- 282

Query: 251 NTMENVLRGVFEEFSN 266
            T   ++R + +E ++
Sbjct: 283 -TAATMIRELIQEVAD 297


>gi|322489782|emb|CBZ25042.1| putative lysyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 586

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 11/185 (5%)

Query: 91  TGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLD--LRRDTLHKNIVKRTR 147
           + +  L A +I +LS     LP   FG   + +  RF+ R+LD  + RD + K  ++R  
Sbjct: 180 SSEFSLKATEITLLSTCYHMLPDDYFGLSSFEQ--RFRQRYLDFIVNRDNI-KTFIQRAN 236

Query: 148 IINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLL 205
           II  +R      +F+E  TP+L   +    AR F+   + +NQ  F  +  AP+ Y + L
Sbjct: 237 IIKYIRKFFDERDFVEVETPVLNQIAGGAAARPFVTHHNDLNQTMFLRI--APELYLKEL 294

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           +  G DR +++   FR+E       P EF   +   ++++  D +   E++L G+  E  
Sbjct: 295 VVGGMDRVYEVGKQFRNEGIDLTHNP-EFTSCEAYWAYMDYHDWMTATEDLLYGLAMELH 353

Query: 266 NGNTV 270
               V
Sbjct: 354 GSPIV 358



 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 24/40 (60%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   A +  +PP GG   GIDR+VM L    N++EV LFP
Sbjct: 521 GFVAALEHALPPTGGWGLGIDRLVMFLTSQSNIKEVLLFP 560


>gi|326474610|gb|EGD98619.1| lysyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 567

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 16/194 (8%)

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186
           R ++L       N+++ R+ I +SMR       F+E +TPIL + S    A+ F+  +  
Sbjct: 214 RHVELLSSPSAANVLRARSLITHSMRNFFANREFMEVNTPILASKSGGAIAQPFVTSATE 273

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                 +L  AP+ + + L+  GFDR F+I P FR+E       P EF   +   +F + 
Sbjct: 274 FPDRPLSLRIAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP-EFTTCEFYQAFADL 332

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLR---ICYDDAIRRY----------GTDKPDL 293
           + ++ T E++L  +  E    N   NN L    + +    RR           G   PDL
Sbjct: 333 ESLIETTESLLSTLALEVQQLNKKLNNSLSPTTVSFTGPYRRVDFIPAIEEAIGRKLPDL 392

Query: 294 RNPIIMHNVTEHFV 307
           ++   +  V E F 
Sbjct: 393 QSDDALSQVKETFA 406



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 23/39 (58%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G  +  + G+PP GG   GIDR+ ML  GA+ + +V  F
Sbjct: 511 GYLQTLEWGLPPTGGWGCGIDRVCMLFTGARRISDVLSF 549


>gi|254781118|ref|YP_003065531.1| lysyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040795|gb|ACT57591.1| lysyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 502

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 115/241 (47%), Gaps = 16/241 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            + ++G V+  R  G  +F+DI D  G  Q+  + D+A  +      S+ +L +  +   
Sbjct: 62  MITVAGRVYSSRNSG--MFMDIHDASGKIQIFTHKDTADQD------SQNLLSMIDIGDI 113

Query: 80  RSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                       G++ ++AQKI +LS A   +P   +G  +    IR++ R+LD+  ++ 
Sbjct: 114 IGITGQVRRTKRGELTVNAQKIIMLSKALNSIPETYYGLSDV--EIRYRKRYLDIISNSD 171

Query: 139 HK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVNQGSFYALPQ 196
            K    +R+ +I+ +R  M  + F+E  TPIL         D F     + +   Y L  
Sbjct: 172 SKIRFQQRSLLISQIRHFMEKKGFMEVETPILQPIYGGATADPFKTHHNILKADMY-LRI 230

Query: 197 APQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           AP+ Y + ++ SG  D+ F++   FR+E   S   P EF  ++   ++ +  D++  +E+
Sbjct: 231 APELYLKRVLISGLTDQVFELNRNFRNEGVSSRHNP-EFTMIEAYWAYTDYRDMMKLVED 289

Query: 256 V 256
           +
Sbjct: 290 L 290



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 13/91 (14%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR--------AFQCG 532
           +++  CNG+EI      N  SE+       + + ++V ++   G +         A   G
Sbjct: 405 RFETYCNGWEIC-----NAFSELNDPVEQRIRMEQQVEQSHQRGEHTILDEDFLDAMTYG 459

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP  G+  GIDR++MLL  A ++R+V LFP
Sbjct: 460 MPPASGLGLGIDRLIMLLTNAPSIRDVILFP 490


>gi|319777274|ref|YP_004136925.1| asparaginyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318038349|gb|ADV34548.1| Asparaginyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 452

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 143/336 (42%), Gaps = 50/336 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + +  WV   R +  I F+ I D   +   QV    +   F+    +     + + G+V 
Sbjct: 21  LEIKAWVTSNRGNKKIRFISINDGSTVQSLQVTCKGEKFDFDKLDQIHLGAAVEVKGIV- 79

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
              A T  A      +EL A K+++L  A+ L  P+  +    E++R      D+     
Sbjct: 80  ---ALTPKAQ---QPLELVATKVKLLRDAD-LDFPIQKQGINLETLR------DIPHVRH 126

Query: 139 HKNIVKRTRIINSMRCRMIAENFIE-----CSTPILTASSPEGARD-FLVPSRVNQGSFY 192
             N+++ T +I S   + + + F E      + PI+T++  EGA + F+V    ++  F+
Sbjct: 127 RTNLLRATMLIRSTLAKEVNKYFDEHGYLYFNAPIITSNDGEGAGETFVVNDGNSKDPFF 186

Query: 193 ALPQAPQQYKQLLMAS----GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              +A       L A     GF + +  AP FR E   + +   EF+ ++ E++F E  D
Sbjct: 187 GTRKATLGVTGQLHAESYAIGFKKVYTFAPTFRAEHSNTKKHAAEFWMIEPEVAFYELKD 246

Query: 249 ILNTMENVLRGVFE--------EFSNGN-TVS-------NNFLR-----ICYDDAIRRYG 287
            +   +++L+ V +        EF   N TV        N+FL+     I Y DAI+   
Sbjct: 247 AIKLADDMLKSVIKNTIKKHPAEFKFLNETVDKGLLERLNHFLKTKLSVIDYRDAIKELA 306

Query: 288 TDKPDLRNPIIMHNV---TEHFVHSEFRVFSKILSV 320
             K    N  I   +   TEH  +   ++F+  ++V
Sbjct: 307 KVKDQFENQDIQFGLDLATEHERYISEKIFNGPVAV 342


>gi|319792237|ref|YP_004153877.1| lysyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315594700|gb|ADU35766.1| lysyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 520

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 131/297 (44%), Gaps = 49/297 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V ++G +   R  G   F  ++D  G  Q+    D A  E A +    W    +L  +G 
Sbjct: 82  VSVAGRMMLKRVMGKASFATLQDATGRIQLYVTRD-AVGEEAYAEFKRWDLGDILGAEGT 140

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRR 135
           +M            TG++ +   K+ +L+ +   LP   +G  +  +  +++ R++DL  
Sbjct: 141 LMKTK---------TGELSVKVTKLRLLTKSLRPLPGDFYGMADQEQ--KYRQRYVDLIT 189

Query: 136 DTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY-- 192
           D   +     R++ ++++R  M+A +F+E  TP+L            +P   N   F   
Sbjct: 190 DEAARVRFTARSKAVSALREFMVANDFLEVETPMLHP----------IPGGANAKPFKTH 239

Query: 193 --ALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             AL Q      AP+ Y + L+  GF+R F+I   +R+E   S R   EF  ++   ++ 
Sbjct: 240 HNALDQEMFLRIAPELYLKRLIVGGFERVFEINRSYRNEGI-SVRHNPEFTMMEFYAAYW 298

Query: 245 EQDDILNTMENVLRGVF------EEFSNGNT---VSNNFLRICYDDAIRRYGTDKPD 292
              D+++  E ++R +       ++ + G     +S  F R+   +AI ++ TD  D
Sbjct: 299 NYRDLMDFTETLIRTIADKAVGSQQLTYGGKPVDLSQPFERLTIREAILKH-TDAGD 354



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR++MLL  + ++R+V LFP
Sbjct: 478 RALEYGMPPTGGCGIGIDRLMMLLTDSPSIRDVILFP 514


>gi|325268749|ref|ZP_08135377.1| asparagine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324988917|gb|EGC20872.1| asparagine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 476

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 112/274 (40%), Gaps = 32/274 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  +D G  + + GWV   R    + F+ + D   I   QVV +P     +  
Sbjct: 16  RTKIVDALACTDFGKDINVKGWVRSHRSSKAVDFIALNDGSTIKNIQVVVDPSKMDADEL 75

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVA-EELPLPVFGER-E 119
           KS+ +   + I G ++    +        GQ  E+  +++EI  +   + P+   G+  E
Sbjct: 76  KSITTGVCISIVGTLVESQGK--------GQTSEIQCKEVEIYGLCPSDYPMQKKGQSFE 127

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           Y      KY  + LR +T       R  +  ++        F    TP++T S  EGA +
Sbjct: 128 YMR----KYGHMRLRTNTFGAVFRIRHNMAIAIHRYFHEHGFYYFHTPLITGSDAEGAGN 183

Query: 180 FLVPSRVN------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDED 224
               + ++               F+          QL   L A+     +   P FR E+
Sbjct: 184 MFQVTTLDLDRIAKSGKVDYNADFFGKRTNLTVSGQLEGELGATSLGAIYTFGPTFRAEN 243

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             + R   EF+ ++ E++F+++D++++  E+ ++
Sbjct: 244 SNTPRHLAEFWMVEPEVAFIDKDELMDLEEDFIK 277



 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + +L    + G+ +EV    +       + G  PHGG   G +R+++ 
Sbjct: 399 EIIGGSVREENYDKLLAEIDSRGMKREV----YDWYLDTRKYGTCPHGGFGLGFERLILF 454

Query: 550 LLGAKNVREVSLF 562
           + G +N+R+V  F
Sbjct: 455 VTGMQNIRDVIPF 467


>gi|121710664|ref|XP_001272948.1| aspartyl-tRNA synthetase Dps1, putative [Aspergillus clavatus NRRL
           1]
 gi|119401098|gb|EAW11522.1| aspartyl-tRNA synthetase Dps1, putative [Aspergillus clavatus NRRL
           1]
          Length = 556

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 34/199 (17%)

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF-GEREYPESI--- 124
           ++ + G+V        +A I    +E+  +K+ ++S  A++LP+ V   ER  PE+    
Sbjct: 152 IVQVTGIVKKPEIPISSATI--SNLEIHIKKVYMISEAAQQLPMQVKDAERPPPETTEEG 209

Query: 125 ---------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS---- 165
                          R   R LDL+ +T      +    I+S    + AE  I+      
Sbjct: 210 NLVDAEGTPIVTLKTRLDNRVLDLQTET-----SQAITWISSGVAELFAEYMIKSGSRWI 264

Query: 166 -TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP L  ++ EG  +        +  + A  Q+PQ YKQ+ +A   +  F+IAP FR ED
Sbjct: 265 FTPKLVGAATEGGSNVFEVKYFKKSGYLA--QSPQLYKQMCIAGDMENVFEIAPVFRAED 322

Query: 225 PRSDRLPGEFYQLDMEMSF 243
             + R   EF  LD E +F
Sbjct: 323 SNTHRHLTEFSGLDFEKTF 341



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R +  + + ++    G+  +     F     AF+ G PPH G   
Sbjct: 469 YDFFMRGEEIMSGAQRINDIKELEESMIAKGLDPK--HEGFEDYLAAFRQGCPPHAGGGL 526

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIVM  LG  NVR  SLFP
Sbjct: 527 GLNRIVMFFLGLPNVRLASLFP 548


>gi|313679937|ref|YP_004057676.1| lysyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152652|gb|ADR36503.1| lysyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 498

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 131/298 (43%), Gaps = 27/298 (9%)

Query: 2   HRY-RTHSCGDLGVSDVGSF---------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           +RY +TH    +  +  G+          VR++G +  +R  G + F  + D  G  Q+ 
Sbjct: 28  YRYEKTHDAAQILEAHAGAAPEQAWPEERVRVAGRLVSLRRMGKVTFAHLLDESGRIQLY 87

Query: 52  ANPDSA-CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
            + D+   + + K +    ++  +G V +           TG++ ++ ++ + L  A   
Sbjct: 88  LSRDATEQYRLLKKLDIGDIVGAEGTVFTTK---------TGEVTVAVERWQPLVKALR- 137

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           PLP        + +R++ R+LDL  +   +++ + R R++  +R  +    F+E  TP++
Sbjct: 138 PLPDKWHGIKDKEVRYRQRYLDLIVNPEVRDVFRTRARVVRHIRRFLEERGFLEVETPVI 197

Query: 170 --TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
             TA   E AR F          F          K+LL+  GF++ F++   FR+E   +
Sbjct: 198 LPTAGGTE-ARPFKTFHNALAHEFELRISLELPLKKLLVG-GFEKVFELGRVFRNEGIDA 255

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
              P EF  L+   ++ +  D+    E +L  + +E + G T++     I +    RR
Sbjct: 256 QHNP-EFTMLEAYWAYADYQDMAEMTEAMLSSLVQELTGGYTLAYQGRTIDFTPPFRR 312



 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+ M+L    ++R+V LFP+
Sbjct: 447 ALEHGMPPAGGMGLGIDRLTMILADQPSIRDVILFPL 483


>gi|171780089|ref|ZP_02920993.1| hypothetical protein STRINF_01877 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281437|gb|EDT46872.1| hypothetical protein STRINF_01877 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 496

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 119/278 (42%), Gaps = 19/278 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + ++     ++G +   R  G + F  I+D  G  Q+    D+     ++I K       
Sbjct: 56  LHEINKTATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRKDAVGDENYQIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L I+G +M             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGIEGEIMRTD---------MGELTIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +    F+E  TP+L   +   A    V     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISGIRRYLDGLGFLEVETPVLHNEAGGAAARPFVTHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QDMDMVLRIALELHLKRLIVGGMEKVYEIGRVFRNEGMDATHNP-EFTMIELYEAYADFK 282

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           DI++  E +++      +    ++     I  D   +R
Sbjct: 283 DIMDITEGIIQNASAAVNGNGPITYQGTEIAIDQPFKR 320



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+  
Sbjct: 431 LSRFEAQAKAKELGDDEATGVDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDAL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|24379232|ref|NP_721187.1| lysyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|39932192|sp|Q8DUW8|SYK_STRMU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|24377146|gb|AAN58493.1|AE014919_1 lysyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 496

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 113/251 (45%), Gaps = 19/251 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D+     ++G +   R  G + F  ++D  G  Q+    D+     ++I K       
Sbjct: 56  LHDINETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKKADIGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G +M             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEIMRTDM---------GELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++L +  + R++II+ +R  +    F+E  TP+L   +   A          
Sbjct: 165 YLDLISNRESLER-FITRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R +++   FR+E   +   P EF  +++  ++ + +
Sbjct: 224 QDMDMVLRIATELHLKRLIVGGMERVYEMGRIFRNEGMDATHNP-EFTSIEVYQAYADFE 282

Query: 248 DILNTMENVLR 258
           DI++  E +++
Sbjct: 283 DIMDLTEGIVQ 293



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L+ F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+V 
Sbjct: 431 LERFKAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|260889462|ref|ZP_05900725.1| asparagine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260860873|gb|EEX75373.1| asparagine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 462

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/308 (21%), Positives = 124/308 (40%), Gaps = 51/308 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCID 74
           +G  + ++GWV ++R      F+++ D    T  QVV + +   FE    +     + + 
Sbjct: 16  LGKEIEINGWVKKIRSQKNFGFIELNDGTFFTGIQVVFDEELENFEEISKLTISSSIKVT 75

Query: 75  GLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           G+V+         ++  GQ  E+ A KI +   A+    P+  +R   E +R     L  
Sbjct: 76  GIVVE--------SLGKGQDYEIKATKISVYQKADS-DYPLQNKRHSFEFLR-TIAHLRP 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPS 184
           R +        R+ +  ++      +NF+   TPI+T S  EGA +           VP 
Sbjct: 126 RTNAFFATFRVRSILSYAIHKFFQEKNFVYVQTPIITGSDAEGAGEMFRLTTLDINNVPK 185

Query: 185 RVN-----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             N     +  F+          QL     A+ F   +   P FR E   + +   EF+ 
Sbjct: 186 TENGSIDFKQDFFGKEANLTVSGQLNVETFATAFKNTYTFGPTFRAEKSNTPKHAAEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGV--------------FEEFSNGN-------TVSNNFL 275
           ++ E++F + D  ++ +E +++ +              F +F + +        V+N F 
Sbjct: 246 MEPEIAFADLDVNMDVIEEMIKYIVNYVRENAKEEMEFFNQFVDKDLFNRLDTLVNNEFG 305

Query: 276 RICYDDAI 283
           RI Y +AI
Sbjct: 306 RITYTEAI 313



 Score = 40.4 bits (93), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G  R    +V+L     +G+ +E     +       + G  PH G   
Sbjct: 377 DLLAPGIGEIVGGSQREDDYDVLLGKIHEMGLKEE----DYWWYLDLRKYGSVPHSGFGL 432

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G DR++M + G  N+R+V  FP +
Sbjct: 433 GFDRMLMYITGMTNIRDVIPFPRT 456


>gi|229062242|ref|ZP_04199564.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717070|gb|EEL68749.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 463

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/323 (21%), Positives = 126/323 (39%), Gaps = 61/323 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V     ++
Sbjct: 21  VQVSGWIRNLRDSKAFGFIELNDGSFFKGVQIVFDTELENFKEIAKLPLSSSVKVEGKVI 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A+KI+I  +++    P+  +R   E +R       LR  T
Sbjct: 81  ATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHLRPRT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              +   R R I +       +   F+   TPI+T S  EGA +     RV       +P
Sbjct: 129 NAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDLNNVP 185

Query: 196 QAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           +                       Q      A  F   +   P FR E+  + R   EF+
Sbjct: 186 KGEDGQVDESKDFFAKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFW 245

Query: 236 QLDMEMSFVEQDDILNTMENVLR--------------GVFEEFSN-------GNTVSNNF 274
            ++ E++F E  D+++  E++L+                F  F +        N ++++F
Sbjct: 246 MVEPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVINSDF 305

Query: 275 LRICYDDAIRRYGTDKPDLRNPI 297
            RI Y +AI+       + + P+
Sbjct: 306 GRITYTEAIKVLQESGAEFKYPV 328


>gi|167516606|ref|XP_001742644.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163779268|gb|EDQ92882.1| predicted protein [Monosiga brevicollis MX1]
          Length = 649

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 83/171 (48%), Gaps = 5/171 (2%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRII 149
           G++ ++  +I++LS     LP   FG  +     RF+ R+LDL  ++   +N + R +II
Sbjct: 129 GELSIAPVEIQLLSPCLRVLPHQHFGITDM--ETRFRQRYLDLMVNSKARENFITRAKII 186

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
             +R  +    F+E  TP++   +        V    +      +  AP+ Y ++L+  G
Sbjct: 187 TYLRRFLDNMGFLEVETPMMNQIAGGATAKPFVTHHNDLNLDLFMRVAPELYLKMLVVGG 246

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +DR ++I   FR+E       P EF   +  M++ + +D++   E +L G+
Sbjct: 247 YDRVYEIGRQFRNEQIDLTHNP-EFTSCEFYMAYADYEDLMEVTEQLLAGL 296



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 25/40 (62%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G  +A + G+PP  G   G+DR+ M L  + N++EV LFP
Sbjct: 467 GFIKALEHGLPPTAGWGIGLDRLAMFLTDSNNIKEVLLFP 506


>gi|146081824|ref|XP_001464365.1| lysyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134068457|emb|CAM66747.1| putative lysyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|322497768|emb|CBZ32844.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 586

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 11/185 (5%)

Query: 91  TGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLD--LRRDTLHKNIVKRTR 147
           + +  L A +I +LS     LP   FG   + +  RF+ R+LD  + RD + K  ++R  
Sbjct: 180 SSEFSLKATEITLLSTCYHMLPDDYFGLSSFEQ--RFRQRYLDFIVNRDNI-KTFIQRAN 236

Query: 148 IINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLL 205
           II  +R      +F+E  TP+L   +    AR F+   + +NQ  F  +  AP+ Y + L
Sbjct: 237 IIKYIRKFFDERDFVEVETPMLNQIAGGAAARPFVTHHNDLNQTMFLRI--APELYLKEL 294

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           +  G DR ++I   FR+E       P EF   +   ++++  D +   E++L G+  E  
Sbjct: 295 VVGGMDRVYEIGKQFRNEGIDLTHNP-EFTSCEAYWAYMDYHDWMTATEDLLYGLAMELH 353

Query: 266 NGNTV 270
               V
Sbjct: 354 GSPIV 358



 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 24/40 (60%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   A +  +PP GG   GIDR+VM L    N++EV LFP
Sbjct: 521 GFVAALEHALPPTGGWGLGIDRLVMFLTSQSNIKEVLLFP 560


>gi|299536697|ref|ZP_07050007.1| lysyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298727811|gb|EFI68376.1| lysyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 497

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 114/257 (44%), Gaps = 19/257 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  I+D  G  Q+    D      +E+ K      ++ + G V
Sbjct: 61  VIIAGRIMTKRGKGKAGFAHIQDLNGQIQIYVRQDHVGEEAYELFKQADLGDIVGVRGNV 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RR 135
                         G++ + A++   L+ A   +P    G ++  +  R++ R+LDL   
Sbjct: 121 FRTQV---------GELSVKAEEFTFLTKALRPMPEKFHGLQDVEQ--RYRQRYLDLMTN 169

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
           +   K  + R++II ++R  +    ++E  TP+L T +    AR F+          Y +
Sbjct: 170 EDSKKTFITRSKIIRAIRNYLDNAGYLEVETPMLHTIAGGAAARPFITHHNALDMELY-M 228

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G ++ ++I   FR+E   +   P EF  +++  +F +  DI++  E
Sbjct: 229 RIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP-EFTMIELYEAFADYQDIMSLTE 287

Query: 255 NVLRGVFEEFSNGNTVS 271
           N++  V +E     +V 
Sbjct: 288 NLIAHVAQEVLGTTSVQ 304



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 29/42 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           A + GMPP GG+  GIDR++MLL  + ++R+V LFP  ++  
Sbjct: 455 ALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLFPTMRHIT 496


>gi|297833954|ref|XP_002884859.1| hypothetical protein ARALYDRAFT_478516 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330699|gb|EFH61118.1| hypothetical protein ARALYDRAFT_478516 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 625

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 11/166 (6%)

Query: 114 VFGEREYPESI-------RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECS 165
           V GE   PE+        R++ R+LDL  +   + I K R  II+ +R  +  +NF+E  
Sbjct: 243 VPGETRNPEAYVLKDQESRYRQRYLDLMLNVEVRQIFKTRAHIISYIRRFLDNKNFLEVE 302

Query: 166 TPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
           TP++   +    AR F+          Y +  AP+ + + L+  G +R ++I   FR+E 
Sbjct: 303 TPMMNMIAGGAAARPFVTHHNDLDMRLY-MRIAPELFLKQLIVGGLERVYEIGKQFRNEG 361

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
                 P EF   +  M+F + +D++   E++L G+ +E + G  +
Sbjct: 362 IDLTHNP-EFTTCEFYMAFADYNDLMKMTEDMLSGMVKELTGGYKI 406



 Score = 42.0 bits (97), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+ P GG   GIDR+ ML   ++N++EV LFP
Sbjct: 569 ALEYGLAPTGGWGLGIDRLAMLFTDSQNIKEVILFP 604


>gi|289621241|emb|CBI52024.1| unnamed protein product [Sordaria macrospora]
          Length = 598

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 16/248 (6%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGL 76
           V + G V  VR  G  ++FLD++  +   Q + N +       E+ +  R+   L   G 
Sbjct: 81  VIIHGRVQSVRRAGNKLMFLDLKGEFEHVQGLCNFNKLQVTGVELGE-FRTLAKLLNRGD 139

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--R 134
           ++S +         TG++ + A ++  L      PLP   E E    +R ++R +D+   
Sbjct: 140 IVSITGRATKTP--TGELSIEATRLPELLTPALAPLPFKLEDE---EVRIQHRHVDMLVN 194

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVP-SRVNQGSFY 192
           R T+   +  R+ +I  +R  +    F+E  TPIL  S S   AR F    S  +     
Sbjct: 195 RKTI-DTLRLRSHLIKYLRDFLHERGFLEFQTPILAESASGATARPFTTAASETSVNKNL 253

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           A+  AP+ + + L+  G D+ F++ P FR+E       P EF   +   ++   DD++  
Sbjct: 254 AMRIAPELWLKRLVVGGVDKVFELGPAFRNEGIDQTHNP-EFTMCEFYNAYANLDDLIAL 312

Query: 253 MENVLRGV 260
            E +L G 
Sbjct: 313 TEELLCGA 320


>gi|290580761|ref|YP_003485153.1| lysyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254997660|dbj|BAH88261.1| lysyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 496

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 113/251 (45%), Gaps = 19/251 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D+     ++G +   R  G + F  ++D  G  Q+    D+     ++I K       
Sbjct: 56  LHDINETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDTVGDDNYQIFKKADIGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G +M             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEIMRTDM---------GELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++L +  + R++II+ +R  +    F+E  TP+L   +   A          
Sbjct: 165 YLDLISNRESLER-FITRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPFTTHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R +++   FR+E   +   P EF  +++  ++ + +
Sbjct: 224 QDMDMVLRIATELHLKRLIVGGMERVYEMGRIFRNEGMDATHNP-EFTSIEVYQAYADFE 282

Query: 248 DILNTMENVLR 258
           DI++  E +++
Sbjct: 283 DIMDLTEGIVQ 293



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L+ F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+V 
Sbjct: 431 LERFKAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|194246497|ref|YP_002004136.1| Lysyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|193806854|emb|CAP18283.1| Lysyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 497

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 127/279 (45%), Gaps = 27/279 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   FL ++D++   Q+    D      FE+ K+     ++ I G++
Sbjct: 59  VTIAGRIILKREQGKAGFLHLQDYHYKIQIYIKLDLIGDKAFELYKNSDLGDIIGISGIL 118

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDLRRD 136
                        T ++ + A     L+ A  LPLP  +   +  E IR K R++DL  +
Sbjct: 119 FKTK---------TNELTIKANDFIHLTKAL-LPLPDKYKGLKNKEIIR-KRRYIDLIMN 167

Query: 137 TLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
           +  + I   R++II ++R     +NF+E  TP L +      A+ F+      + +FY L
Sbjct: 168 SKTREIFFLRSQIIKNIRNFFDNKNFLEVETPTLQSILGGATAKPFVTYHNDLESNFY-L 226

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A +   + L+  G +  ++I   FR+E   +   P EF  L++ ++F +  D++N  +
Sbjct: 227 RIATELSLKKLIVGGLEAVYEIGKVFRNEGIDASHNP-EFTSLEIYLAFADMRDMMNLTK 285

Query: 255 NVLRGVFE------EFSNGNTVS--NNFLRICYDDAIRR 285
             L+ V +      EF   N +   N F  I   DAI++
Sbjct: 286 QCLKDVCKKTLKTLEFKYQNHIINFNKFEEIHILDAIKQ 324



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 27/40 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GG+  GIDR+VMLL    N+ +V LFP  +N
Sbjct: 452 ALEYGMPPTGGMGLGIDRLVMLLTNVDNINDVILFPHFKN 491


>gi|148981823|ref|ZP_01816540.1| lysyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145960731|gb|EDK26071.1| lysyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 505

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 7/169 (4%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150
           G + ++ ++ E+L+ A   PLP        + +R++ R++DL  +   +N  + R+++++
Sbjct: 128 GDLYVNMEEFELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFIVRSKLVS 186

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           S+R  M ++ ++E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 187 SIRNFMSSKGYLEVETPMMHVI-PGGATARPFITHHNALDIDMY-LRVAPELYLKRLVVG 244

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           GFDR F+I   FR+E   S R   EF  ++   ++ +  D+++  E +L
Sbjct: 245 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYQAYSDYKDLMDLTEEML 292



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ ML      +R+V LFP
Sbjct: 464 ALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFP 499


>gi|283768889|ref|ZP_06341799.1| asparagine--tRNA ligase [Bulleidia extructa W1219]
 gi|283104442|gb|EFC05816.1| asparagine--tRNA ligase [Bulleidia extructa W1219]
          Length = 462

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 116/255 (45%), Gaps = 21/255 (8%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVV--ANPDSACFEIAKSVRSEWV 70
            D   +V+L GW+   R    + F+ + D  ++   Q+V  AN  S   E++K +    +
Sbjct: 22  KDQVEYVQLQGWIRTNRAGKNVSFISLNDGTYFSNAQIVYDANTLSNYEEVSKYLTGTAI 81

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             I  L+++  A+           E+ A++I +  +A+    P+  +R   E +R +   
Sbjct: 82  SVIGKLILTPDAKQ--------PFEVQAKEIRLEGLADH-TYPLQKKRHSLEYLR-EIAH 131

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPS----R 185
           L  R +TL      R+ +  ++      + F+  +TPI+T +  EGA + F V +    +
Sbjct: 132 LRPRTNTLSAVFRVRSVLAMAIHTFFQEQGFVYVNTPIITGADAEGAGETFTVTTNYGEK 191

Query: 186 VNQGSF--YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           + +  F  +A      Q +    A  F   +   P FR E+  +     EF+ ++ EM+F
Sbjct: 192 MEEDFFGKHASLTVSGQLQAEAFALAFRDVYTFGPTFRAEESNTTTHAAEFWMIEPEMAF 251

Query: 244 VEQDDILNTMENVLR 258
            + +  ++ +E++++
Sbjct: 252 ADLEYDMDVIEDMVK 266


>gi|227823482|ref|YP_002827455.1| lysyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227342484|gb|ACP26702.1| lysyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 498

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 137/303 (45%), Gaps = 31/303 (10%)

Query: 2   HRYRTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +L V        ++    V ++G V   R  G  +F+D+ D  G  Q+ ++
Sbjct: 36  HFHRTMTNAELAVKYEGLEPDTETQDVVTVAGRVFSSRNSG--MFMDLHDASGKIQIFSH 93

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D+   E     R+   +   G ++  +   I      G++ ++AQ I +L+ +  LP+P
Sbjct: 94  KDTTPEE----ARALLPMIDIGDIIGVTG--IVRRTKRGELTINAQAITMLTKSL-LPMP 146

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL-TA 171
                     +R++ R LD+  +   K    +R+RI++ +R  M  + F+E  TP+L + 
Sbjct: 147 EKWHGLSDIELRYRKRHLDIMTNEESKLRFQQRSRIVSGIRRFMENDGFMEVETPMLHSV 206

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRL 230
                A  F       +   Y L  AP+ Y +  + SG  D+ F+I   FR+E   +   
Sbjct: 207 YGGATAEPFKTHHNTLKLDMY-LRIAPELYLKRTLVSGLTDKVFEINRNFRNEGVSTRHN 265

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGV------FEEFSNGN---TVSNNFLRICYDD 281
           P EF  ++   ++ + +DI++ +E +   +        EF+ G+   +    F R+   D
Sbjct: 266 P-EFTMMECYWAYADYEDIMDLVERMFAELAVSIHGTTEFAYGDKEISFKGPFRRVPMPD 324

Query: 282 AIR 284
           A++
Sbjct: 325 AVK 327



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 12/98 (12%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++  CN +E+ +           R  M E + QA +    +K++ +        A   G
Sbjct: 405 RFETYCNTWELGNAFSELNDPEEQRARMVEQLEQAHARGEKAKQLDDE----FLDAIDQG 460

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR++MLL  A ++R+V LFP  ++  D
Sbjct: 461 MPPAGGLGIGVDRLIMLLTNAPSIRDVILFPARRHKAD 498


>gi|94309979|ref|YP_583189.1| lysyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|123081366|sp|Q1LPK6|SYK_RALME RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|93353831|gb|ABF07920.1| lysine tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 515

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 131/308 (42%), Gaps = 30/308 (9%)

Query: 6   THSCGDL----GVSDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH  G L    G +D  +       V ++G +   R  G   F  ++D  G  Q     D
Sbjct: 49  THQAGALHAQYGETDQATLEASPVEVSIAGRMMLKRVMGKASFATVQDGSGQIQFYITRD 108

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               ++  + +  W L   G ++S   E    N   G++ +  +++ +LS A   PLP  
Sbjct: 109 KVGEDVYAAFK-HWDL---GDIISARGELFRTN--KGELSVQVRELRLLSKALR-PLPDK 161

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 +  +++ R++DL      ++  + RT+ I+S+R  M    F+E  TP+L     
Sbjct: 162 FHGLADQETKYRQRYVDLIVSPETRSTFRARTQAISSIRRHMADAGFMEVETPMLHPIPG 221

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + +  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 222 GAAAKPFITHHNALDMQMF-MRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 279

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIR 284
           F  ++   ++ +   +++  EN++R    +     TV         S  F R+    AI+
Sbjct: 280 FTMMEFYAAYTDYRWLMDFTENLIRQAAIDARGSATVTYQGRELDLSKPFHRLTICGAIQ 339

Query: 285 RYGTDKPD 292
           +Y  +  D
Sbjct: 340 KYAPEYTD 347



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY 526
           +G+D       +++L   G EIA+G    +  E   + F      K+  +     F   Y
Sbjct: 412 RGSDTQPGITERFELFITGREIANGFSELNDPEDQAERFRKQVEQKDAGDEEAMYFDADY 471

Query: 527 -RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GMPP GG   GIDR+VMLL  + N+R+V LFP
Sbjct: 472 IRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVILFP 509


>gi|320593613|gb|EFX06022.1| lysyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 622

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 7/183 (3%)

Query: 92  GQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRII 149
           G++ + A +I +LS +   LP   +G +++ +  RF+ R+LDL   D   + + KR+R+I
Sbjct: 212 GELSIMASEIVLLSPSLHILPSEYYGFKDHEQ--RFRSRYLDLLFNDASRETLWKRSRMI 269

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R       FIE  TP L A +    A  F+          Y L  AP+ Y ++L+  
Sbjct: 270 KYIRDFFSTREFIEVETPTLAAIAGGATALPFITHHNSLNRDLY-LRIAPELYLKMLIVG 328

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GF++ F++   FR+E       P E+  ++   ++ +  D++   E ++ G+ ++ +   
Sbjct: 329 GFNKVFELGKNFRNEGIDLTHSP-EYTSIEFYAAYYDVYDVMAMTEELVSGLVKDLTGSY 387

Query: 269 TVS 271
             S
Sbjct: 388 KTS 390



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 23/38 (60%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + G+PP GG   GIDR+ M L     +REV  FPM
Sbjct: 551 RALEHGLPPTGGWGLGIDRLAMFLTNNYAIREVISFPM 588


>gi|255934850|ref|XP_002558452.1| Pc12g16540 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|255942169|ref|XP_002561853.1| Pc18g00060 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583071|emb|CAP81281.1| Pc12g16540 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211586586|emb|CAP94230.1| Pc18g00060 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 556

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 74/176 (42%), Gaps = 21/176 (11%)

Query: 389 VRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNE 447
           +RL+  DG +    AG D  +  SF  D    + ++LG I  + +      D  FY  + 
Sbjct: 393 LRLNYMDGVALLKEAGVDVSEQESFENDFTTAMEKQLGQIIRDKY------DTDFYVLD- 445

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
              K   A  PF       +    N         YD    G EI SG  R H  + + ++
Sbjct: 446 ---KFPMAVRPFYTKADPNDKRFSNS--------YDFFMRGEEIMSGAQRIHDIKELEES 494

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               G+  E  +  F     AF+ G PPH G   G++RIVM  LG  NVR  SLFP
Sbjct: 495 MRAKGL--EPNQEGFEDYLNAFRQGCPPHAGGGLGLNRIVMFFLGLPNVRLASLFP 548



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 35/214 (16%)

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF-GEREYPESI--- 124
           ++ + G+V        +A+I    +E+  +K+ ++S  A+ LP+ V   ER  PE+    
Sbjct: 152 IVQVTGIVKKPEIPISSASI--SHLEIHIRKVYMISEAAQMLPMQVKDAERPPPENTEEG 209

Query: 125 ---------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS---- 165
                          R   R LDL+ +T      +    I+S    + AE  I+      
Sbjct: 210 AQVDAEGAPIVTLKTRLDNRVLDLQTET-----SQAITWISSGVSELFAEYMIKSGSRWI 264

Query: 166 -TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP L  ++ EG           + ++ A  Q+PQ YKQ+ +A   +  F+IAP FR ED
Sbjct: 265 FTPKLVGAATEGGSGVFEVKYFKRNAYLA--QSPQLYKQMCIAGDMENVFEIAPVFRAED 322

Query: 225 PRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257
             + R   EF  LD E +F     ++L   EN+L
Sbjct: 323 SNTHRHLTEFSGLDFEKTFRNHYHEVLEFAENLL 356


>gi|94267598|ref|ZP_01290933.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
 gi|93451927|gb|EAT02649.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
          Length = 493

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 19/274 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +  +R  G   FL ++D  G  QV    D    EI +   + +     G + + S 
Sbjct: 58  VAGRIMALRRFGKAAFLHLQDSSGRIQVHVKRD----EIGQQAYATFKKFDVGDIAAFSG 113

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-----RDT 137
                   TG++ + A  +++L+ +   PLP           R++ R++DL      RDT
Sbjct: 114 PLFRTK--TGEVTIQALSVKLLTKSLR-PLPEKFHGLTDIETRYRQRYVDLMVNPEVRDT 170

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
             +    R  II+ +R  +    F+E  TP++ A +    A+ F           Y L  
Sbjct: 171 FRR----RVEIIHLVRDFLTNRGFLEVETPMMQAIAGGATAKPFKTHHNALGLDLY-LRI 225

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R F+I   FR+E   S R   EF  L+   ++   D+++   E +
Sbjct: 226 APELYLKRLLVGGFERVFEINRNFRNEG-LSTRHNPEFTMLEFYQAYATYDELMELAEEM 284

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           L  V  E      ++     +      RRY  D+
Sbjct: 285 LSWVAMEVCGTMQINYQGQEVDLAPPWRRYTMDE 318



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+ MLL  A ++R+V LFP
Sbjct: 449 RALEYGMPPAAGCGVGIDRLTMLLTDAPSIRDVILFP 485


>gi|229159250|ref|ZP_04287275.1| Lysyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228624265|gb|EEK81066.1| Lysyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 499

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 127/288 (44%), Gaps = 39/288 (13%)

Query: 5   RTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RT++  DL +S  G F           V ++G +   R  G   F  I+D +G  Q+   
Sbjct: 37  RTNATNDL-LSLYGEFSKEELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVR 95

Query: 54  PDSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EE 109
            D+     +E+ K+     ++ I+G V   +          G++ + A    +L+ +   
Sbjct: 96  KDAVGDEEYELFKTADLGDLVGIEGKVFKTNV---------GELSVKATGFTLLTKSLRP 146

Query: 110 LPLPVFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           LP    G ++  +  R++ R+LDL      R+T     V R++II  MR  +    ++E 
Sbjct: 147 LPDKYHGLKDVEQ--RYRQRYLDLITSMESRETF----VTRSKIIREMRRYLDDNGYLEV 200

Query: 165 STPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP++ A +    AR F+          Y +  A + + + L+  G ++ ++I   FR+E
Sbjct: 201 ETPMMHAIAGGASARPFITHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
              +   P EF  +++  ++ +  DI+   EN++  + ++     T+ 
Sbjct: 260 GVSTRHNP-EFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQ 306



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|108799949|ref|YP_640146.1| lysyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119869059|ref|YP_939011.1| lysyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|123178636|sp|Q1B7P4|LYSX_MYCSS RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|296439668|sp|A1UHB3|LYSX_MYCSK RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|108770368|gb|ABG09090.1| lysyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119695148|gb|ABL92221.1| lysyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 1112

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 17/207 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G V R+R +GG++F  +RD  G  Q++   D++  E   +      + +  L+ +   
Sbjct: 675 VAGRVLRIRDYGGVLFAQLRDWSGEVQLLL--DNSTLEQGSTADFTAAIDLGDLIAATGT 732

Query: 83  ETINAN----IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
              + N    ++     L+ + +         PLP   +    +  R + R++DL  +T 
Sbjct: 733 MGYSKNGTRSLLVRHWRLTGKCLR--------PLPDKWKGLTDQEARVRARYVDLAVNTE 784

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
            +++++ R+ +++++R  +  + F+E  TPIL        AR FL          Y L  
Sbjct: 785 ARDLIRARSGVLHAIRDTLYHKGFLEVETPILQQIHGGANARPFLTHINAYDLDLY-LRI 843

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDE 223
           AP+ Y + L   G +R F++   FR+E
Sbjct: 844 APELYLKRLCVGGVERVFELGRAFRNE 870



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 7/93 (7%)

Query: 479  AFQYDLVCNGFEIASGGIR-----NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
            A ++DLV  G E+ +              +  Q+    G   E +E     L +A +  M
Sbjct: 1020 AERWDLVAWGVELGTAYSELTDPVEQRRRLQAQSLLAAGGDPEAMELDEDFL-QAMEYAM 1078

Query: 534  PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            PP GG+  G+DR+VML+ G +++RE   FP+++
Sbjct: 1079 PPTGGLGMGVDRVVMLITG-RSIRETLPFPLAR 1110


>gi|229013760|ref|ZP_04170888.1| Asparaginyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228747429|gb|EEL97304.1| Asparaginyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 463

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 132/320 (41%), Gaps = 55/320 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V     ++
Sbjct: 21  VQVSGWIRNLRDSKAFGFIELNDGSFFKGVQIVFDTELENFKEIAKLPLSSSVKVEGKVI 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A+KI+I  +++    P+  +R   E +R       LR  T
Sbjct: 81  ATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHLRPRT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARD-FLVPSR----VNQGS 190
              +   R R I +       +   F+   TPI+T S  EGA + F V ++    V +G 
Sbjct: 129 NAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVAKGE 188

Query: 191 ---------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+A         QL     A  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 DGQVDESKDFFAKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMVE 248

Query: 239 MEMSFVEQDDILNTMENVLR--------------GVFEEFSN-------GNTVSNNFLRI 277
            E++F E  D+++  E++L+                F  F +        N ++++F RI
Sbjct: 249 PEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVINSDFGRI 308

Query: 278 CYDDAIRRYGTDKPDLRNPI 297
            Y +AI+       + + P+
Sbjct: 309 TYTEAIKVLQESGAEFKYPV 328


>gi|291461106|ref|ZP_06027024.2| asparagine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291378975|gb|EFE86493.1| asparagine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 462

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 119/304 (39%), Gaps = 51/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV ++R      F+++ D   +   Q+V       F+    +     + + G ++
Sbjct: 20  IELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSIASTIKVKGTLV 79

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                       +GQ +E+ A+KIEI   A+ L  P+  +R   E +R K   L  R +T
Sbjct: 80  KSEG--------SGQDLEVKAKKIEIFQKAD-LEYPLQNKRHTFEYLRTKAH-LRARTNT 129

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVN- 187
                  R+ +  ++       NF+   TPI+T S  EGA +           VP + N 
Sbjct: 130 FSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEMFRITTLDLNKVPKKENG 189

Query: 188 ----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+          QL      + F   +   P FR E   + R   EF+ ++ E
Sbjct: 190 EVDFSKDFFGKSTNLTVSGQLNGETYCAAFRNIYTFGPTFRAEYSNTARHASEFWMIEPE 249

Query: 241 MSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLRICY 279
           ++F +    +   E +++ + +          EF N            N ++N+F R+ Y
Sbjct: 250 IAFADLGANMELAEAMVKYIIKYVMDNCPEEMEFFNSFIEKGLFDKLNNVLNNDFGRVTY 309

Query: 280 DDAI 283
            +AI
Sbjct: 310 TEAI 313



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 15/91 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  EI  G  R    E++++    + + KE  E      RFG           PH
Sbjct: 377 DLLAPGIGEIIGGSQREDNYELLVKRMDELKLDKEAYEFYLDLRRFGSF---------PH 427

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R++M L G +N+R+V  FP + N
Sbjct: 428 SGYGLGFERMMMYLTGMQNIRDVIPFPRTPN 458


>gi|113970465|ref|YP_734258.1| asparaginyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123324982|sp|Q0HIB6|SYN_SHESM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|113885149|gb|ABI39201.1| asparaginyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 466

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 109/280 (38%), Gaps = 48/280 (17%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    GI FL + D             +CF   + V    + 
Sbjct: 12  GEHAVGSTVTVRGWVRTRRDSKAGISFLAVYD------------GSCFNPIQGVVPNSLE 59

Query: 72  CIDGLVMSRSAETINANIITGQI----------ELSAQKIEILSVAEEL-PLPVFGEREY 120
             D  V+  +A    + I+TG+I          EL   ++E+    E+    P+  +R  
Sbjct: 60  NYDNEVLKLTAGC--SVIVTGEIVESPGAGQAYELQVTQVEVTGWVEDPDTYPMAAKRHS 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGAR 178
            E +R       LR  T     V R R  ++    R   EN F+  STP++TAS  EGA 
Sbjct: 118 IEHLR---ELAHLRPRTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAG 174

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFR 221
           +    S ++  +          Y +        L  SG            + +   P FR
Sbjct: 175 EMFRVSTLDMENLPRTSDGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFR 234

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            E+  + R   EF+ ++ E++F    DI N  E +L+  F
Sbjct: 235 AENSNTSRHLAEFWMVEPEVAFATLSDIANLAEGMLKYAF 274


>gi|328716987|ref|XP_001945425.2| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           isoform 1 [Acyrthosiphon pisum]
 gi|328716989|ref|XP_003246090.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           isoform 2 [Acyrthosiphon pisum]
          Length = 478

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 121/289 (41%), Gaps = 42/289 (14%)

Query: 2   HRYRTHSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRD---HYGITQVV-ANPDS 56
           H Y + S  D L     G   +L GW   +R     IF+D+ D   H  +  V+  N   
Sbjct: 18  HLYSSCSVKDILNTQPEGCKKKLKGWAKAMRKMKENIFVDLDDGSTHRRLQVVIPKNKIP 77

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF 115
           A      S  +E VL              N N    Q+EL A+ I +  S   +   P  
Sbjct: 78  ASLTYGCSFEAEGVL------------VRNPNY---QLELVAESINVYGSCVVQDGYPFA 122

Query: 116 GEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
             + Y PE +R ++  +  R  T    +  R ++ +++R R   +NFIE + P+L+++  
Sbjct: 123 PRKTYHPEYVR-QHLHIRPRTATFSSLLRLRDKLSSAVRNRFAEDNFIEINAPVLSSNDC 181

Query: 175 EGARDFLV----PSRVNQGSFYALPQAP-------QQYKQL-------LMASGFDRYFQI 216
           EGA +         ++ +       Q+P       Q Y  +        MA    + + +
Sbjct: 182 EGAGEVFAVKPDSEKLVKEMISKDHQSPMEAFFNGQTYLTVSGQMHLECMARALTKVYTL 241

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF 264
            P FR E+ +S     EFY ++ E +F++  +++L+++E     V ++ 
Sbjct: 242 GPTFRAENSKSRLHLSEFYMIEAEQAFIDNTEELLSSIEKTTSTVVKQL 290


>gi|296392865|ref|YP_003657749.1| lysyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296180012|gb|ADG96918.1| lysyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 503

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 5/141 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           PLPV   +E  E  + + R+LDL      +++ + R  ++  MRC +    F+E  TPIL
Sbjct: 148 PLPV-AHKELSEEAQVRQRYLDLIMRPEARSVARTRVAVLREMRCALERRGFLEVETPIL 206

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T      AR F+  S      FY L  AP+ + +  +  G DR F+I   FR+E   + 
Sbjct: 207 QTIQGGASARPFIAHSNALDIDFY-LRIAPELFLKRCLVGGLDRVFEINRNFRNEGIDAT 265

Query: 229 RLPGEFYQLDMEMSFVEQDDI 249
             P EF  L+   ++   D +
Sbjct: 266 HSP-EFTMLEAYEAYGTYDTV 285



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 13/94 (13%)

Query: 481 QYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           ++DL   GFE+A+G          R       L   S  G +  + E+       A + G
Sbjct: 410 KWDLYVRGFELATGYSELVDPVVQRERFQAQALLRSSGDGEAMPLDED----FLAAMEHG 465

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP GG+  G+DR++    G   +R+  LFP+++
Sbjct: 466 MPPAGGLGLGVDRLMTAFTGL-GIRDTVLFPITR 498


>gi|91789471|ref|YP_550423.1| lysyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|91698696|gb|ABE45525.1| lysyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 516

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 18/209 (8%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRII 149
           TG++ + A  I +++ +   PLP        + ++++ R++DL  D +  K  + R++ +
Sbjct: 142 TGELSIHATSIRLVTKSLR-PLPDKFHGMADQEVKYRQRYVDLIMDESARKRFMARSKAV 200

Query: 150 NSMRCRMIAENFIECSTPILTASSPEG--ARDFLV-PSRVNQGSFYALPQAPQQYKQLLM 206
           + +R  M+A +F+E  TP+L    P G  AR F    + ++Q  F  +  AP+ Y + L+
Sbjct: 201 SGLREFMVAHDFLEVETPMLH-PIPGGANARPFKTHHNALDQEMFLRI--APELYLKRLI 257

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS- 265
             GF+R F+I   +R+E   S R   EF  ++   ++    D++   E ++R   ++ + 
Sbjct: 258 VGGFERVFEINRSYRNEGI-SVRHNPEFTMMEFYAAWWNYSDLMTFTEALIRDAAQKVTG 316

Query: 266 ------NGNTV--SNNFLRICYDDAIRRY 286
                  G  V  S  F R+   +AI ++
Sbjct: 317 SLQLSYGGKAVDLSQPFERLTIREAILKH 345



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR++MLL  + ++R+V LFP
Sbjct: 474 RALEYGMPPTGGCGVGIDRLMMLLTDSPSIRDVILFP 510


>gi|88797977|ref|ZP_01113564.1| lysyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88779174|gb|EAR10362.1| lysyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 510

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 126/274 (45%), Gaps = 36/274 (13%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H  GDL           + +    V ++G V R    GG  F+ +RD  G  Q     
Sbjct: 48  REHKAGDLQSQYGDLEKEAIVEQNVRVAVAGRVMR---RGGP-FVGVRDVTGSIQ----- 98

Query: 55  DSACFEIAKSVRSE---WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-- 109
               F + K ++ E   W L   G ++  +     +    G++ +S + IE + +  +  
Sbjct: 99  ----FYMPKPLQKESDDWKLLDIGDLVGVTGTLSKSG--KGELYVSVEAIEDMRILTKSL 152

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPI 168
            PLP        +  +++ R++DL  +   +++ + R+++++ +R  + + +F+E  TP+
Sbjct: 153 RPLPDKYHGLADQEAKYRQRYVDLIINDQTRSVFEVRSKVVSGIRNYLSSRDFMEVETPM 212

Query: 169 LTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           L    P GA  R F+          Y L  AP+ Y + L+  G +R F+I   +R+E   
Sbjct: 213 LQVI-PGGATARPFITHHNAMDRDLY-LRIAPELYLKRLVVGGLERVFEINRSYRNEGVS 270

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +   P EF  L+   ++ + +D+++  E++LR V
Sbjct: 271 TRHNP-EFTMLEWYQAYADYNDLMDMTEDMLRTV 303



 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VM L  + ++++V LFP
Sbjct: 466 ALEYGLPPTAGEGIGIDRLVMFLTDSPSIKDVILFP 501


>gi|225571840|ref|ZP_03780710.1| hypothetical protein CLOHYLEM_07814 [Clostridium hylemonae DSM
           15053]
 gi|225159504|gb|EEG72123.1| hypothetical protein CLOHYLEM_07814 [Clostridium hylemonae DSM
           15053]
          Length = 227

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 110/237 (46%), Gaps = 29/237 (12%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F ++ D  G  Q     DS   E  K  +   +  I GL      E       TG+I + 
Sbjct: 4   FCNVLDQSGNIQSYVARDSLGEEAYKEFKKLDIGDIVGL----EGEVFKTK--TGEISIH 57

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSM 152
           A  +++LS + ++ LP           R++ R++DL      RDT     +KR+ II+++
Sbjct: 58  ATAVKLLSKSLQI-LPEKFHGLTNTDTRYRQRYVDLIMNPEVRDTF----IKRSHIISAI 112

Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ------APQQYKQLLM 206
           R  +  + F+E  TP+L +++   A      +R  +  F AL +      + + Y + L+
Sbjct: 113 RRYLDGQGFLEVETPMLVSNAGGAA------ARPFETHFNALSEDFKLRISLELYLKRLI 166

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
             G ++ ++I   FR+E   +   P EF  +++  ++ + + +++  EN+ R V +E
Sbjct: 167 VGGLEKVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMMDLTENLYRHVAQE 222


>gi|123969360|ref|YP_001010218.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|123199470|gb|ABM71111.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 488

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 113/248 (45%), Gaps = 15/248 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR------SEWVLCID 74
           V ++G V   R  G I F  I D  G  Q+  +     F + K          E V   D
Sbjct: 38  VSIAGRVLAKRVMGKIAFFTISDQEGQIQLYLDKRIINFNLEKQKLLSFEDLKEIVDIGD 97

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            + +  + +  N     G++ +  +K E+LS + + PLP           R++ R+LDL 
Sbjct: 98  WIGVYGTIKKTNK----GELSIKVEKWEMLSKSLQ-PLPDKWHGLTDIEKRYRQRYLDLI 152

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            +   KN+ K R + I+ +R  +   NF+E  TPIL + +    AR F+          Y
Sbjct: 153 VNPHSKNVFKTRAKCISFIRKWLDNRNFLEIETPILQSEAGGAEARPFITHHNTLDIPLY 212

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + + + ++  GF++ +++   FR+E   +   P EF  +++  ++ +  D++N 
Sbjct: 213 -LRIATELHLKRMVVGGFEKVYELGRIFRNEGISTRHNP-EFTSVEIYEAYSDYVDMMNL 270

Query: 253 MENVLRGV 260
            E +++ +
Sbjct: 271 TEELIKDI 278



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR++ML+  + ++R+V  FP+
Sbjct: 442 ALEIGMPPTGGLGIGIDRLIMLITNSASIRDVIPFPL 478


>gi|322418264|ref|YP_004197487.1| lysyl-tRNA synthetase [Geobacter sp. M18]
 gi|320124651|gb|ADW12211.1| lysyl-tRNA synthetase [Geobacter sp. M18]
          Length = 492

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 23/281 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           +FV ++G +   R  G   F+ ++D  G  Q+    D+   E+     +  +  I G   
Sbjct: 55  TFV-VAGRIIMRRSFGKAAFVQVQDRKGRMQLYMKKDTLGEELFAEFENYDIGDIIG--- 110

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
              A        TG++ L+   + +L+ +  LPLP           R++ R++DL     
Sbjct: 111 ---ATGTPFRTKTGELSLAVSSVRLLTKSL-LPLPEKFHGLTDVETRYRQRYVDLIVSPE 166

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALP 195
           + +   KR+RI+  +R  M  ++F+E  TP++    P GA  + F+          + L 
Sbjct: 167 VREVFYKRSRIVQLIREFMTRKDFLEVETPMMQ-QIPGGATAKPFVTHHNALDMELF-LR 224

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++   +D++N  E 
Sbjct: 225 IAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYQAYATFEDLMNFTEE 283

Query: 256 VLRGVFEE------FSNGN---TVSNNFLRICYDDAIRRYG 287
           +L  V +E      F+ G    +    + R    +AI  YG
Sbjct: 284 LLCHVTQELLGTLDFTYGGEPISFQRPWKRFTVKEAILEYG 324



 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 449 RALEYGLPPTAGEGIGIDRLVMLLTDSPSIRDVILFP 485


>gi|160880706|ref|YP_001559674.1| lysyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160429372|gb|ABX42935.1| lysyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 489

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 12/266 (4%)

Query: 2   HRYR-THSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
            RY+ TH   D + + D    + ++G +  +R  G + F++I D YG  QV    D    
Sbjct: 26  ERYQVTHELKDAIKLLDGTKDISVAGRILSIRRMGKLCFVNIGDIYGKLQVAIRRDDVGE 85

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER 118
           E  +  R  + +   G  +  S E       TG+  + AQK+  L  A + LP    G  
Sbjct: 86  EAYEFFRQGFDI---GDFLGVSGEIFTTQ--TGEKTIRAQKLTFLGKAFKPLPEKFHGIT 140

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +     R +Y  L +  DT ++ ++K  ++I  +R  +    ++E  TP+L    P GA 
Sbjct: 141 DKDSCYRQRYLDLIMNEDTRNRFLLK-FQMIKEIRRYLEDSGYLEVETPVLN-DKPSGAT 198

Query: 179 DFLVPSRVNQGSFYA-LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                S  N       L  AP+ Y +  +  G  + F+ A CFR+E   +  L  +F  L
Sbjct: 199 ARPFISHHNALDMEVNLRIAPETYLKRCIVGGIPKVFEFARCFRNEGMDATHLQ-DFTML 257

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEE 263
           +   ++    D +  ++ +L  V ++
Sbjct: 258 EGYCAYYNYTDNMKFLQTMLATVIKK 283



 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 6/89 (6%)

Query: 481 QYDLVCNGFEIASGGIR-----NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           ++ L+ NG E+ +              +M QA +     +E +   +  +  A + GMPP
Sbjct: 396 RFQLIINGAEVINAYSELVDPVEQKKRLMEQALAKANGDEEAMTMDYDYI-TAMEYGMPP 454

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             G   G+DR + ++ G +N+R+  LFP+
Sbjct: 455 ISGWGMGVDRFLQVITGQENLRDTVLFPI 483


>gi|328716991|ref|XP_003246091.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           isoform 3 [Acyrthosiphon pisum]
          Length = 405

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 121/289 (41%), Gaps = 42/289 (14%)

Query: 2   HRYRTHSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRD---HYGITQVV-ANPDS 56
           H Y + S  D L     G   +L GW   +R     IF+D+ D   H  +  V+  N   
Sbjct: 18  HLYSSCSVKDILNTQPEGCKKKLKGWAKAMRKMKENIFVDLDDGSTHRRLQVVIPKNKIP 77

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVF 115
           A      S  +E VL              N N    Q+EL A+ I +  S   +   P  
Sbjct: 78  ASLTYGCSFEAEGVL------------VRNPNY---QLELVAESINVYGSCVVQDGYPFA 122

Query: 116 GEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
             + Y PE +R ++  +  R  T    +  R ++ +++R R   +NFIE + P+L+++  
Sbjct: 123 PRKTYHPEYVR-QHLHIRPRTATFSSLLRLRDKLSSAVRNRFAEDNFIEINAPVLSSNDC 181

Query: 175 EGARDFLV----PSRVNQGSFYALPQAP-------QQYKQL-------LMASGFDRYFQI 216
           EGA +         ++ +       Q+P       Q Y  +        MA    + + +
Sbjct: 182 EGAGEVFAVKPDSEKLVKEMISKDHQSPMEAFFNGQTYLTVSGQMHLECMARALTKVYTL 241

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF 264
            P FR E+ +S     EFY ++ E +F++  +++L+++E     V ++ 
Sbjct: 242 GPTFRAENSKSRLHLSEFYMIEAEQAFIDNTEELLSSIEKTTSTVVKQL 290


>gi|327355477|gb|EGE84334.1| asparaginyl-tRNA synthetase Slm5 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 563

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 37/258 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC---FEIAKSVRSEWVLCIDG 75
           +R+ G++  VR      F +I D   I   Q +  P  A       A  +   W  C  G
Sbjct: 58  IRVQGFIRSVRKQKRFAFAEISDGSTIKSVQAILTPAQAARLSTGSAIDISGVWQPCPPG 117

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
              S               EL A +++I   A+    P+  +   P+ +R   +   LR 
Sbjct: 118 KKQSH--------------ELHATEVKITGEADPESYPIQKKYHSPDFLR---QIPHLRL 160

Query: 136 DTLHKNIVKRTRI-----INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-- 188
            T   +++ R R      +  +    +  NF++   P++T+S  EGA +    +  ++  
Sbjct: 161 RTPFNSLLSRFRSECIFQLGQVFHSRLGSNFVQVQPPLITSSDCEGAGEVFTVAPGDKVG 220

Query: 189 ----GSFYALPQAPQQYKQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
               G F+  P+      QL +   A+     + ++P FR E   + R   EFY L++EM
Sbjct: 221 DGEKGEFFRSPKYLTVSSQLHLEAYAAELGNVWTLSPTFRAEKSDTPRHLSEFYMLEVEM 280

Query: 242 SFVEQ-DDILNTMENVLR 258
           +FV   D + +T+E+++R
Sbjct: 281 NFVHSLDSLTDTVESLIR 298


>gi|330832369|ref|YP_004401194.1| lysyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329306592|gb|AEB81008.1| lysyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 496

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 17/241 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G   F  I+D  G  Q+    D      +EI K       + ++G V  
Sbjct: 65  IAGRIMTKRGKGKAGFAHIQDREGQIQIYVRKDDVGEENYEIFKKADLGDFIGVEGDVFK 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDT 137
            +          G++ + A+K+  LS A   PLP           R++ R+LDL   R++
Sbjct: 125 TNV---------GELSIHARKLTHLSKALR-PLPEKFHGLTDIETRYRKRYLDLITNRES 174

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
             +  V R++II+ +R  +    F+E  TP+L   +   A    +     Q     L  A
Sbjct: 175 FDR-FVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E ++
Sbjct: 234 TELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADYQDIMDLTEGII 292

Query: 258 R 258
           +
Sbjct: 293 Q 293



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L+ F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LERFEAQAKAKELGDDEATGVDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|85014451|ref|XP_955721.1| asparagine--tRNA ligase [Encephalitozoon cuniculi GB-M1]
 gi|74621026|sp|Q8SQK8|SYNC_ENCCU RecName: Full=Probable asparaginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|19171415|emb|CAD27140.1| ASPARAGINYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 502

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/300 (20%), Positives = 113/300 (37%), Gaps = 36/300 (12%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +  YR+     L   ++G  +R  GWV  VR    I F+++  HY   + V         
Sbjct: 69  LSEYRSIELSKLSKENIGQKIRTFGWVANVRSQSTITFIELYAHYRTVKCVYQK------ 122

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL--SVAEELPLPVFGER 118
                +    +C    V    ++         + E+  + +EI   ++A   PL    E 
Sbjct: 123 -----KMHLTMCTSMTVYGTVSKNFGKK-DAHEFEIQVEGVEIYNGAIAPSFPL---NED 173

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
               +I      L LR       +  R  ++  +R       + E + P +  +  EG  
Sbjct: 174 SSVNAI-LTNGHLGLRTKKRQLFLKARGHLLKIIRDFYFEGEYTEVTPPTMVQTQVEGGS 232

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    + ++  L Q+ Q Y + ++ +   R + I P +R E  R+ R   E+  ++
Sbjct: 233 TLFKLDYYGEDAY--LTQSSQLYLETVVPAS-HRAYCIMPSYRAEKSRTRRHLSEYTHVE 289

Query: 239 MEMSFVEQDDILNTMENVLR---------------GVFEEFSNGNTVSNNFLRICYDDAI 283
            EM+ ++ D +++++E ++                 VF EF         F RI Y +AI
Sbjct: 290 AEMADIDLDGLISSIEALVSYSMRRFYEEMKSDILSVFPEFEFHKVPRTPFKRIKYSEAI 349


>gi|322391976|ref|ZP_08065440.1| lysine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321145202|gb|EFX40599.1| lysine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 496

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 19/244 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    D+     +EI K       L ++G VM 
Sbjct: 65  IAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKSDLGDFLGVEGEVMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A  I  LS A   PLP  F      E+I ++ R+LDL   R+
Sbjct: 125 TDM---------GELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKRYLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     Q     L  
Sbjct: 174 SFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFHDIMDLTEGI 291

Query: 257 LRGV 260
           ++ V
Sbjct: 292 IQHV 295



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|321475859|gb|EFX86821.1| hypothetical protein DAPPUDRAFT_307813 [Daphnia pulex]
          Length = 421

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 95/186 (51%), Gaps = 25/186 (13%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREY--PESIRFKYRFLDLRRDT-LHKNIVKRTRII- 149
           +E+  + ++++   +    P FG R+Y  PE +R +   + LR  T ++  I++ + +I 
Sbjct: 46  VEIQGETVKVVGKLDLQSFP-FGPRKYYAPEYVRQQ---IHLRPKTNIYSAILRLSSLIT 101

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVP-------------SRVNQGSFYALPQ 196
           N+++  +I +NF+   TPILT++  EGA +  +              +R  + S++    
Sbjct: 102 NALQTTLIQDNFVSVFTPILTSNDCEGAGEVFLTRPASDEMCREMGGNRKLEESYFNKKV 161

Query: 197 APQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNT 252
                 QL    +A G  + F + P FR E+ RS R   EF  L+ E++F  +   IL+T
Sbjct: 162 YLTVSGQLHLEAIAGGISKVFTLGPTFRSENSRSRRHLAEFRMLEAEIAFCNDLQPILST 221

Query: 253 MENVLR 258
           +E++++
Sbjct: 222 IESLVK 227


>gi|253999564|ref|YP_003051627.1| lysyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|313201598|ref|YP_004040256.1| lysyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|253986243|gb|ACT51100.1| lysyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|312440914|gb|ADQ85020.1| lysyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 504

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 124/283 (43%), Gaps = 30/283 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V ++G +   R  G   F  ++D  G  Q+  + +S   E+  + + +W    +L   G+
Sbjct: 68  VSVAGRMMLKRVMGKASFATLQDKSGRIQLFISKESIGEELYDAFK-KWDMGDILAARGV 126

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           V             TG++ +   ++ +L+ +   PLP        +  +++ R++DL   
Sbjct: 127 VFKTK---------TGELSIKVSELRLLTKSLR-PLPEKFHGLSDQETKYRQRYVDLIVS 176

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           D   +  + R++I+ ++R  M+   F+E  TP+L    P GA  + F+          Y 
Sbjct: 177 DDTRQTFIARSKIVAAIRSFMLGNEFLEVETPMLH-PIPGGASAKPFITHHNALDMQMY- 234

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  
Sbjct: 235 MRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SVRHNPEFTMMEFYAAYTDYKWLMDFT 293

Query: 254 ENVL---------RGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
           EN +           V E       +S  F R+    AI++Y 
Sbjct: 294 ENCIRAAAIAARGTAVLEYQGRTLDLSQPFQRLTIVGAIQKYA 336



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+G    + +E     F     +KE  ++          RA + GMPP 
Sbjct: 412 RFELFVTGREIANGFSELNDAEDQAARFHAQVAAKEAGDDEAMYYDADFIRALEYGMPPT 471

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 472 GGCGIGIDRLVMLLTDSPSIRDVILFP 498


>gi|307128736|ref|YP_003880766.1| lysyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306483198|gb|ADM90068.1| lysyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 493

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 10/214 (4%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEI--AKSVRSEWVLC 72
           + G  V + G + R+R  G   F++++D +GI Q+    DS   ++I   K +    ++ 
Sbjct: 49  EYGKNVIIYGRILRMRRMGKASFIEMKDKHGIIQIYLKRDSIKNYDIFFKKLLDIGDIIG 108

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G +    +   N  +   +I+L ++ + +L   ++       +  Y    R++ R+LD
Sbjct: 109 IKGFLFKTKSN--NTTVHAKKIKLLSKCLRVLPHVKQDETGKVHDSFYESEQRYRMRYLD 166

Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQG 189
           L  +   K I +KRT+II  +R  +  + ++E  TPIL  S P G  AR F+        
Sbjct: 167 LIVNDKTKYIFIKRTKIIQYIRNYLNKKGYLEVETPIL-QSIPGGAIARPFITHHNALNI 225

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             Y L  + + + + L+  G +  ++ +  FR+E
Sbjct: 226 PLY-LRISNELFLKKLIVGGLEYVYEFSRNFRNE 258



 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           R+ + GMPP  GI  GIDR++MLL   K +++V  F
Sbjct: 454 RSLEFGMPPCAGIGIGIDRLIMLLTNKKCIQDVLFF 489


>gi|300176701|emb|CBK24366.2| Lysyl-tRNA synthetase [Blastocystis hominis]
          Length = 512

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 132/312 (42%), Gaps = 43/312 (13%)

Query: 2   HRYRTHSCGDL---------GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV 51
           H + +HS  D          G  D  S V ++G +   R  G  + F DIR    + QV+
Sbjct: 34  HFHVSHSLSDFRSKWDYLKNGERDEASEVYVAGRIINKRSAGSKLYFYDIRSGETMLQVM 93

Query: 52  ANPDS-------------ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSA 98
           ++ ++                 I K++R+  V+ I G         I      G++ +  
Sbjct: 94  SSLNTYETNDPTPEEKKEHFKHIHKNLRTGDVIGIHG---------IPGRTDMGELSVLP 144

Query: 99  QKIEILSVAEELPLPVFGEREYPE----SIRFKYRFLDLRRDTLHKNI-VKRTRIINSMR 153
           ++I +L+     P      RE+ E     ++++ R+LDL      + +   R++II  +R
Sbjct: 145 KQITLLA-----PCLWTVPREWHELKDPDVKYRKRYLDLLISQHTRQVFYTRSKIIQLIR 199

Query: 154 CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
             + AE F++  T IL+  +        V    +Q    AL  +P+   + L+  G DR 
Sbjct: 200 SFLTAEGFLDVETSILSGLAGGAVATPFVTRSQSQNRDLALRISPELALKELVVGGLDRV 259

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           F++   FR+E   S +   EF  ++  M+F +  D +   E +L  V  E +  +++  +
Sbjct: 260 FEMGKVFRNEGLDS-KHNFEFTSVEAYMAFHDYTDWMRLTEKLLHHVCVEVNQADSLMVD 318

Query: 274 FLRICYDDAIRR 285
             +I +    RR
Sbjct: 319 GTQISFAPPYRR 330



 Score = 43.9 bits (102), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 4/91 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGM 533
           K+ +++L  NG EI +     +       +F+  G  + + +            A + G+
Sbjct: 414 KSERFELFVNGVEIVNAYTEQNDPVKQEMSFAKQGEQRAIGDKEIPPADLTFLNALEYGL 473

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   G+DR+VML+    ++R+V  FP+
Sbjct: 474 PPTAGWGMGVDRLVMLMTNQSSIRDVIFFPV 504


>gi|322500960|emb|CBZ36036.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 536

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 114/253 (45%), Gaps = 34/253 (13%)

Query: 34  GGIIFLDIRDHYGITQVVANPDSACFE-----IAKSVRSEWVLCIDGLVMSRSAETINAN 88
           GGI+F+ IR      QV+   + +  +      A ++ +  +L   G V  R+A+     
Sbjct: 2   GGILFITIRSGEAQLQVLRQVNESFTKADLRAFASTLHTGDILGATG-VPGRTAK----- 55

Query: 89  IITGQIELSAQKIEILSVAEELPLPVFGEREYPE----------SIRFKYRFLDLRRD-T 137
              G++ L A +  IL+     P     +   P+           I+++YRF+D+    +
Sbjct: 56  ---GELSLYATEASILA-----PYVCTDQALCPDLKGFVPLTDTGIKYRYRFVDMMSSPS 107

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
           + ++  KR  I  ++R  + A +F+E  TP+L + +S   A+ F+     N    + L  
Sbjct: 108 VVQHFRKRHAITRALRDFLDARSFVEVETPVLHSVASGANAKPFVTHHNANDADLF-LRV 166

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + +  +  G +R ++I   FR+ED      P EF   +   ++    D++   E +
Sbjct: 167 APELHLKQCVVGGMERVYEIGRVFRNEDADRSHNP-EFTTCEFYAAYHTYKDLMTMTEEI 225

Query: 257 LRGVFEEFSNGNT 269
           LR +    +NG T
Sbjct: 226 LRHL-ALAANGTT 237



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A Q G+PP  G   GIDR+ MLL G+  +RE  LFP+
Sbjct: 402 KALQVGLPPTAGWGMGIDRVAMLLNGSSTIREDILFPL 439


>gi|296118958|ref|ZP_06837531.1| lysine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295968056|gb|EFG81308.1| lysine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 529

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 118/255 (46%), Gaps = 14/255 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G +  +R  G + F  ++D  G TQV A    A  E+ +   + W   +D G  +S
Sbjct: 82  VSIAGRLIFMRNTGKLCFATLQDGDG-TQVQAMLSLA--EVGEDALAAWKADVDLGDFIS 138

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-RRDT 137
            +   I++     + ELS    E    A+ L P+PV    +  E  R + R+ DL  R+ 
Sbjct: 139 VTGRVISSR----RGELSVMASEWQMAAKSLRPMPV-AFADMAEDTRVRQRYNDLILREE 193

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
             KN + R ++I ++R  +  E F E  TP+L T      AR F+  S       + L  
Sbjct: 194 ARKNAMTRIQVIRALRHHLEDEGFNEIETPMLQTLHGGAAARPFVTHSNALDIDLF-LRI 252

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + +  +  G D+ F+I   FR+E       P EF  L++  ++ + + I  T++  
Sbjct: 253 APELFLKRAVVGGIDKVFEINRNFRNEGIDKSHSP-EFAMLEIYDAWSDYNGIAKTIKES 311

Query: 257 LRGVFEEFSNGNTVS 271
           ++ V +     + V+
Sbjct: 312 IQAVAQAVFGSHVVT 326



 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 15/98 (15%)

Query: 481 QYDLVCNGFEIASG-------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        I+    E   +  ++      V++  F     A + GM
Sbjct: 436 KWDLYVRGFELATGYSELVDPVIQRERFEDQARLAADGDDEAMVLDEEF---LSAMEQGM 492

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM----SQN 567
           PP GG   GIDR++M L G   +RE  LFP+    SQN
Sbjct: 493 PPTGGAGMGIDRLLMALTGL-GIRETVLFPLVKPESQN 529


>gi|317504976|ref|ZP_07962924.1| lysine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315663858|gb|EFV03577.1| lysine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 579

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 133/296 (44%), Gaps = 21/296 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y T    +    D    V ++G +   R  G   F +++D  G  QV  + D  C E  K
Sbjct: 38  YSTDIKDEFKDDDEKREVVIAGRMMSRRIMGKASFAELQDSKGRIQVYISRDEICPEENK 97

Query: 64  SVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV------ 114
            + +   + +L I  ++     +       TG+I + A++I +LS + + PLP+      
Sbjct: 98  DLYNVVFKKLLDIGDII---GVKGYVFRTQTGEISVHAKEITLLSKSLK-PLPIVKYKDG 153

Query: 115 --FGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
             + + + PE +R + R++DL   D + +  +KR  I+ +MR       + E  TP L +
Sbjct: 154 VAYDKFDDPE-LRARQRYVDLIVNDGIKETFLKRATILRTMRNFFDEHGYTEVETPTLQS 212

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +    AR F+          Y +  A + Y + L+  GF+  ++I   FR+E       
Sbjct: 213 IAGGASARPFITHFNALNIDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKFHN 271

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT-VSNNFLRICYDDAIRR 285
           P EF  +++ + + + + +++  E +L  + +  +NG+T V N    I +    RR
Sbjct: 272 P-EFTCMELYVQYKDYNWMMSFTEQLLETICKAVNNGSTEVKNGEHTISFKAPFRR 326



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 5/63 (7%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           RA Q GMPP  GI  GIDR+ ML+ G + ++EV LFP  +    +    P + SV++  E
Sbjct: 463 RALQYGMPPTSGIGIGIDRLCMLMTGKEFIQEVLLFPQMKPEAKM----PQS-SVKEWAE 517

Query: 587 LGL 589
           LG+
Sbjct: 518 LGV 520


>gi|167753186|ref|ZP_02425313.1| hypothetical protein ALIPUT_01457 [Alistipes putredinis DSM 17216]
 gi|167659500|gb|EDS03630.1| hypothetical protein ALIPUT_01457 [Alistipes putredinis DSM 17216]
          Length = 462

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 109/258 (42%), Gaps = 29/258 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSEWVLCIDGLVM 78
           V + GWV   R +  + F+ + D   +  +    D A F  E+ + V +   L +DG ++
Sbjct: 19  VVVKGWVRTKRGNKNVAFIALNDGSCVANMQVVVDLAKFDEELLRKVTTGACLRVDGRLV 78

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                   A+   GQ +E+ A+KIEI   A+    P+  +    E +R    +L  R +T
Sbjct: 79  --------ASCGAGQGVEVQAEKIEIYGTADPETYPLQKKGHSLEFLR-DIAYLRPRTNT 129

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVPSRVNQG 189
                  R  +  ++      + F    TP++TAS  EGA         D     +  +G
Sbjct: 130 FGAIFRIRHAMAYAIHKYFNDKGFYYLHTPLITASDCEGAGAMFQVTTLDLNNLPKTEEG 189

Query: 190 S------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +      F+  P +     QL   L A    + +   P FR E+  + R   EF+ ++ E
Sbjct: 190 AVDYSQDFFGRPCSLTVSGQLEGELGALSLGQIYTFGPTFRAENSNTPRHLSEFWMIEPE 249

Query: 241 MSFVEQDDILNTMENVLR 258
           M+F E +D +   E+ L+
Sbjct: 250 MAFYELEDNMELAEDFLK 267


>gi|203287568|ref|YP_002222583.1| asparaginyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|201084788|gb|ACH94362.1| asparaginyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 461

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 104/263 (39%), Gaps = 23/263 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + + GW+   R +G I FL+I D   I   Q V + ++  FE     + E+     G  +
Sbjct: 18  ITVKGWIRTKRSNGKISFLEINDGSNIKGIQAVIDENNPQFE-----KKEFKKLTTGASI 72

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           S +   I +       E+      I+  +++   P+  +R   E +R +   L +R +T 
Sbjct: 73  SLTGILILSPAKGQTYEIKTTNFYIIGESDQKTYPLQKKRHSFEFLR-EIPHLRIRTNTF 131

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----------- 187
                 + +I   +        F    TPI+T++  EG  +    S +N           
Sbjct: 132 GAVARIKNQISYKIHEYFQKNGFFYIHTPIITSNDGEGVGEIFRVSTLNLNNIENKKEID 191

Query: 188 -QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            +  F+   A      Q      A    + +   P FR E+  + R   EF+ ++ EM+F
Sbjct: 192 FKDDFFGKQAFLTVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWMIEPEMAF 251

Query: 244 VEQDDILNTMENVLRGVFEEFSN 266
              +D +N  E+ L+ V  E  N
Sbjct: 252 FTLEDNINLAEDFLKYVLSETLN 274


>gi|169825711|ref|YP_001695869.1| lysyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|259511527|sp|B1HSY5|SYK_LYSSC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|168990199|gb|ACA37739.1| Lysyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 500

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 114/257 (44%), Gaps = 19/257 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  I+D  G  Q+    D      +E+ K      ++ I G V
Sbjct: 64  VIIAGRIMTKRGKGKAGFAHIQDLGGQIQIYVRQDHVGEEAYELFKQADLGDIVGIRGNV 123

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
                         G++ + A++   L+ A   +P    G ++  +  R++ R+LDL  +
Sbjct: 124 FRTQV---------GELSVKAEEFTFLTKALRPMPEKFHGLQDVEQ--RYRQRYLDLMTN 172

Query: 137 TLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
              K   + R++II ++R  +    ++E  TP+L T +    AR F+          Y +
Sbjct: 173 EDSKLTFIARSKIIRAIRNYLDNAGYLEVETPMLHTIAGGAAARPFITHHNALDMELY-M 231

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++  E
Sbjct: 232 RIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP-EFTMIELYEAYADYQDIMSLTE 290

Query: 255 NVLRGVFEEFSNGNTVS 271
           N++  V +E     TV 
Sbjct: 291 NLIAHVAQEVLGTTTVQ 307



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 29/42 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           A + GMPP GG+  GIDR++MLL  + ++R+V LFP  ++  
Sbjct: 458 ALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLFPTMRHIT 499


>gi|319779399|ref|YP_004130312.1| Lysyl-tRNA synthetase (class II) [Taylorella equigenitalis MCE9]
 gi|317109423|gb|ADU92169.1| Lysyl-tRNA synthetase (class II) [Taylorella equigenitalis MCE9]
          Length = 513

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 16/211 (7%)

Query: 88  NIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRT 146
             + G++ + AQ IE++S +   PLP        + +R++ R++DL   ++  +    R+
Sbjct: 138 KTMKGELSVHAQSIELISKSLR-PLPDKFHGLSDQELRYRQRYVDLIMNESTRETFRIRS 196

Query: 147 RIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQL 204
           + +  +R  M    F+E  TP+L    P GA  + F+          Y L  AP+ Y + 
Sbjct: 197 QAMTHLRQIMSEHGFLEVETPMLHPI-PGGATAKPFVTHHNALDMDMY-LRVAPELYLKR 254

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR------ 258
           L+  GFDR F+I   FR+E   S R   EF  ++   ++ + + +++  E +LR      
Sbjct: 255 LVVGGFDRVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYEWMMDFTEKLLREIAVRT 313

Query: 259 -GVFEEFSNGNTVS--NNFLRICYDDAIRRY 286
            G  + F  G  +S    F R+   +AI +Y
Sbjct: 314 LGSAQFFHQGRALSFEEPFERLTMVEAILKY 344



 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMP  GG   GIDR++MLL  +  +R+V LFP
Sbjct: 471 RALEYGMPYAGGCGIGIDRLMMLLTDSSTIRDVLLFP 507


>gi|332796362|ref|YP_004457862.1| lysyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694097|gb|AEE93564.1| lysyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 494

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 11/182 (6%)

Query: 125 RFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           R+ +R++D L  D+  K +  R + I  +R  + ++ FIE  TPIL      GA      
Sbjct: 149 RYAHRYVDFLYNDSSRKAMEIRFKTIKEIRDYLNSKGFIEVETPILQPVYG-GALAKPFK 207

Query: 184 SRVNQ-GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           S+VN     + L  + + Y +  +  GFD+ F+I   FR+ED      P EF +L++  +
Sbjct: 208 SKVNYLNEEWYLRISLELYLKRFIVGGFDKVFEIGKVFRNEDIDVTHNP-EFTELELYWA 266

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           + + +DI+   E++L+ V  +    N       ++ Y  A + Y  +    R   +  ++
Sbjct: 267 YADYNDIMKLTEDMLKTVVSKVLGDN-------KLKYKVADKEYEIELSQFRKITMFDSL 319

Query: 303 TE 304
           +E
Sbjct: 320 SE 321



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA   GMPP GG+  GIDR+VMLL   ++++EV  FPM
Sbjct: 448 RALSYGMPPTGGLGIGIDRLVMLLTNNQSIKEVIPFPM 485


>gi|328769085|gb|EGF79130.1| hypothetical protein BATDEDRAFT_90127 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 508

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 95/188 (50%), Gaps = 18/188 (9%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREY---PESIRFKYRFLDLRRDTLHKNIV---- 143
           +GQ+ + A  +++LS      L ++ ++      E+IR++ R+LD+    +H++ V    
Sbjct: 119 SGQLSIRATCLKMLSPC----LHIYPKKHVLLEDENIRYRQRYLDM---LVHRSTVDLFL 171

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF-YALPQAPQQYK 202
           KR++II ++R       F+E  TP+L+  +  GA      +R++  +    +  AP+ Y 
Sbjct: 172 KRSKIIRTIRSFFDTREFVEIETPVLSLMA-GGANAKPFTTRMDVMNLDLQMRIAPELYL 230

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + L+  G DR ++I   FR+E       P EF   +  M++   D  +   EN+ R V  
Sbjct: 231 KQLVIGGIDRVYEIGKQFRNEGIDKTHNP-EFTTCEFYMAYGTFDQAMELTENLFRDVAT 289

Query: 263 EFSNGNTV 270
           +  NG+T+
Sbjct: 290 KV-NGSTI 296


>gi|268609394|ref|ZP_06143121.1| asparaginyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 472

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/344 (21%), Positives = 132/344 (38%), Gaps = 58/344 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GWV   R    + F+++ D   +   QVV     + +   K  R    L + G  +
Sbjct: 36  VTVCGWVRTSRNSKSVAFIELNDGTSLKNIQVVVEKGDSDY---KEPRVGMSLKVTGKAV 92

Query: 79  SRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    T+  N +        + I IL  A  + PL   G      ++ F      LR  T
Sbjct: 93  AGRNNTVEINAV-------PENITILGDAPTDYPLQKKGH-----TLEFLRTIPHLRGRT 140

Query: 138 LHKNIVKRTRII--NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              N V R R I  +++     + N++  +TP++T S  EGA +    + +   + Y   
Sbjct: 141 NTFNAVWRVRSILASAIHEYFQSHNYVYINTPLITGSDCEGAGEMFQVTTIGYSNEYKSE 200

Query: 196 Q---------------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +                  Q +  + A    + +   P FR E+  + +   EF+ ++ E
Sbjct: 201 EDYYANDFFGKRAGLSVSGQLEGEMAAMAMGKIYTFGPSFRAENSNTPKHLAEFWHIEPE 260

Query: 241 MSFVEQDDILNTMENVLRGVF---------------EEFSNG------NTVSNNFLRICY 279
           ++F+E DD++   E++L+ V                  F  G        +S++F R+ Y
Sbjct: 261 VAFMELDDVIELAEDMLKFVIGKLLKTCPDEIAFFDAHFEKGLKARLEELISHDFGRVTY 320

Query: 280 DDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVN 321
            +AI        D   P+       TEH  +   +VF K + V 
Sbjct: 321 TEAIELLKKSGEDFVYPVEWGCDLQTEHERYLSEKVFKKAVFVT 364



 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G  R +  E +L A     ++ ++  +      R F  G  PHGG   
Sbjct: 388 DLLVPGVGEIIGGSEREYDLEKLLAAMKERNMNLDLYNDYID--LRKF--GSVPHGGFGL 443

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +R++M   G  N+R+V LFP +
Sbjct: 444 GFERLIMYTTGMANIRDVILFPRT 467


>gi|189499923|ref|YP_001959393.1| lysyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189495364|gb|ACE03912.1| lysyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 515

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 24/237 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +  +R  G   F  I+D  G  Q+    D    E+ +     + L   G ++  
Sbjct: 71  VAVAGRIMTLRKMGKASFFHIQDTEGKIQIYIKRD----EVGQESYKTFKLLDIGDIVGI 126

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----------ESIRFKYR 129
              T      TG+I + AQ+ ++LS +   P+PV  E+E             +  R++ R
Sbjct: 127 KGYTFRTK--TGEISIHAQEFQLLSKSLR-PIPVAKEKEVDGKKVTYDAFSDKETRYRQR 183

Query: 130 FLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVN 187
           ++DL  +  + +  +KR+ II+ MR       ++E  TPIL        AR F       
Sbjct: 184 YVDLIVNPEVKETFIKRSAIISFMRNFFSERGYLEVETPILQPVYGGAAARPFTTHHNAL 243

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDMEMSF 243
               Y L  A + + + L+  GFD  F+ A  FR+E    DR    EF Q+++ +++
Sbjct: 244 NMELY-LRIANELFLKRLIVGGFDGVFEFAKDFRNEG--IDRFHNPEFTQVELYVAY 297



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VMLL G  ++R+V  FP
Sbjct: 474 RALEYGMPPCAGLGIGVDRLVMLLTGQDSIRDVIFFP 510


>gi|229094798|ref|ZP_04225804.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228688666|gb|EEL42538.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 499

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 141/330 (42%), Gaps = 50/330 (15%)

Query: 5   RTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RT+S  DL VS  G F           V ++G +   R  G   F  I+D +G  Q+   
Sbjct: 37  RTNSTTDL-VSLYGEFSKEELEEKEITVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVR 95

Query: 54  PDSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EE 109
            D+     +E+  +     ++ I+G V   +          G++ + A    +L+ +   
Sbjct: 96  KDTVGDEEYELFTTADLGDLVGIEGKVFKTNV---------GELSVKATGFTLLTKSLRP 146

Query: 110 LPLPVFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           LP    G ++  +  R++ R+LDL      R+T     V R++II  MR  +    ++E 
Sbjct: 147 LPDKYHGLKDVEQ--RYRQRYLDLITSIESRETF----VTRSKIIREMRRYLDDNGYLEV 200

Query: 165 STPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP++ A +    AR F           Y +  A + + + L+  G ++ ++I   FR+E
Sbjct: 201 ETPMMHAIAGGASARPFTTHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NF 274
              +   P EF  +++  ++ + +DI+   EN++  + ++     T+            +
Sbjct: 260 GVSTRHNP-EFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEINLEPEW 318

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            R+   DAI+++     D  NP+ +    E
Sbjct: 319 TRLHMVDAIKQHSG--ADFWNPMSVEEARE 346



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|227547917|ref|ZP_03977966.1| lysyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227080002|gb|EEI17965.1| lysyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 520

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 113/255 (44%), Gaps = 14/255 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEWVLCID-GLVM 78
           V ++G +   R  G + F  +++  G   QV+ +      E+     + W   +D G ++
Sbjct: 75  VSVAGRIMFKRDTGKLCFASLQEGDGTQLQVMLS----LAEVGADALASWKDDVDLGDIV 130

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
           S +   I +    G++ + A   ++ S A   PLPV    E  E  R ++R+ DL  R  
Sbjct: 131 SVTGRVIASK--RGELSVMASSWQMASKALR-PLPV-AFAEMNEEQRVRHRYTDLIMRSA 186

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
              N + R ++I ++R  +   +F+E  TP+L T      AR F+  S       Y L  
Sbjct: 187 ARDNAMTRIKVIAAVRKYLTGLDFVEVETPMLQTLHGGAAARPFVTRSNALDIDLY-LRI 245

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y +  +  G +R F+I   FR+E   S   P EF  L+   ++    D    M+ +
Sbjct: 246 APELYLKRCVVGGIERVFEINRNFRNEGVDSSHSP-EFTMLETYQAWGTYADGAKMMKGL 304

Query: 257 LRGVFEEFSNGNTVS 271
           ++   EE      V+
Sbjct: 305 VQFCAEEVFGSQKVT 319



 Score = 42.0 bits (97), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 15/93 (16%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK---------EVVENRFGGLYRAFQC 531
           ++DL   GFE+A+G   + + + ++Q    V  ++          V++  F     A + 
Sbjct: 428 KWDLYIRGFELATG--YSELVDPVIQRERFVDQARLAAHGDDEAMVLDEDF---LAAMEQ 482

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP  G   G+DR++M L G   +RE  LFPM
Sbjct: 483 GMPPTAGTGMGVDRLLMALTGL-GIRETVLFPM 514


>gi|218895213|ref|YP_002443624.1| lysyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228898830|ref|ZP_04063113.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228963177|ref|ZP_04124347.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|229074138|ref|ZP_04207185.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|229113753|ref|ZP_04243189.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|226737090|sp|B7ISY7|SYK_BACC2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|218541672|gb|ACK94066.1| lysyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228669750|gb|EEL25156.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228709032|gb|EEL61158.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228796562|gb|EEM44000.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228860855|gb|EEN05232.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 499

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 141/330 (42%), Gaps = 50/330 (15%)

Query: 5   RTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RT+S  DL VS  G F           V ++G +   R  G   F  I+D +G  Q+   
Sbjct: 37  RTNSTTDL-VSLYGEFSKEELEEKEITVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVR 95

Query: 54  PDSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EE 109
            D+     +E+  +     ++ I+G V   +          G++ + A    +L+ +   
Sbjct: 96  KDTVGDEEYELFTTADLGDLVGIEGKVFKTNV---------GELSVKATGFTLLTKSLRP 146

Query: 110 LPLPVFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           LP    G ++  +  R++ R+LDL      R+T     V R++II  MR  +    ++E 
Sbjct: 147 LPDKYHGLKDVEQ--RYRQRYLDLITSMESRETF----VTRSKIIREMRRYLDDNGYLEV 200

Query: 165 STPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP++ A +    AR F           Y +  A + + + L+  G ++ ++I   FR+E
Sbjct: 201 ETPMMHAIAGGASARPFTTHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NF 274
              +   P EF  +++  ++ + +DI+   EN++  + ++     T+            +
Sbjct: 260 GVSTRHNP-EFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEINLEPEW 318

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            R+   DAI+++     D  NP+ +    E
Sbjct: 319 TRLHMVDAIKQHSG--ADFWNPMSVEEARE 346



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|15827728|ref|NP_301991.1| lysyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221230205|ref|YP_002503621.1| lysyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|13093279|emb|CAC31774.1| C-term lysyl-tRNA synthase [Mycobacterium leprae]
 gi|219933312|emb|CAR71488.1| C-term lysyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 1039

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 98/228 (42%), Gaps = 25/228 (10%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D    V +SG + R+R +GG++F  +RD  G  QV+   D+   E     
Sbjct: 579 SHTVAQALDADDEGTVSISGRILRIRDYGGVLFAHVRDWSGEIQVLL--DNLVLECC--- 633

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-------PLPVFGER 118
                 CI     +     I    +TG +  S      L V           PLP   + 
Sbjct: 634 ------CIADFTAAIDLGDIVE--MTGNMGFSKNGTRSLIVRNWRLIGKCLRPLPNKWKG 685

Query: 119 EYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                 R + R++DL  +T  +N I+ R+ ++ S+R  + A+ F+E  TPIL        
Sbjct: 686 LTDPEARVRTRYVDLAVNTESRNLIMARSCVLRSVREMLFAKGFVEVETPILQQIHGGAT 745

Query: 177 ARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           AR F   +R+N       L  AP+ Y + L   G +R F++   FR+E
Sbjct: 746 ARPF--ATRINTYDMDLFLRIAPELYLKRLCIGGVERVFELGRAFRNE 791



 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +
Sbjct: 947  AERWDLVAWGIELGTAYSELTDPVEQRRRLHEQSLLAVGGNPEAMELDED----FLQAME 1002

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1003 YAMPPTGGLGMGIDRLVMLITG-RSIRETLPFPLAK 1037


>gi|163942293|ref|YP_001647177.1| asparaginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163864490|gb|ABY45549.1| asparaginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 463

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/323 (21%), Positives = 126/323 (39%), Gaps = 61/323 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V     ++
Sbjct: 21  VQVSGWIRNLRDSKAFGFIELNDGSFFKGVQIVFDTELENFKEIAKLPLSSSVKVEGKVI 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A+KI++  +++    P+  +R   E +R       LR  T
Sbjct: 81  ATPGAKQ--------PFEIKAEKIDVEGLSDS-DYPLQKKRHTFEYLR---TIAHLRPRT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              +   R R I +       +   F+   TPI+T S  EGA +     RV       +P
Sbjct: 129 NAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDLNNVP 185

Query: 196 QAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           +                       Q      A  F   +   P FR E+  + R   EF+
Sbjct: 186 KGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFW 245

Query: 236 QLDMEMSFVEQDDILNTMENVLR--------------GVFEEFSN-------GNTVSNNF 274
            ++ E++F E  D+++  E++L+                F  F +        N ++++F
Sbjct: 246 MVEPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVINSDF 305

Query: 275 LRICYDDAIRRYGTDKPDLRNPI 297
            RI Y +AI+       + + P+
Sbjct: 306 GRITYTEAIKVLQESGAEFKYPV 328


>gi|237739093|ref|ZP_04569574.1| lysyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423693|gb|EEO38740.1| lysyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 493

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/282 (21%), Positives = 119/282 (42%), Gaps = 36/282 (12%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SACFEIAKSVRSEWVLCIDGLV 77
           + +G +  +R  G + F  I D  G  Q+    D    +    I K +    ++ ++G +
Sbjct: 57  KTAGRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGENEFDHIVKMLNVGDIIGVEGEL 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDL--- 133
                E         ++ L  + I +L+     LP    G  +    IR++ R++DL   
Sbjct: 117 FVTHTE---------ELTLRVKSISLLTKNVRSLPEKYHGLTDV--EIRYRKRYVDLIMN 165

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
              RDT     +KRT+II +++  +    F+E  TP++        A+ F+         
Sbjct: 166 PEVRDTF----IKRTQIIKAVKKYLDDRGFLEVETPLMHPILGGAAAKPFVTHHNALNLD 221

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L  AP+ Y + L+  GF+R +++   FR+E   +   P EF  +++  S     D++
Sbjct: 222 LF-LRIAPELYLKKLIVGGFERVYELGRNFRNEGISTRHNP-EFTMIELYQSHANFHDMM 279

Query: 251 NTMENVLRGVFEEFSNGNTVS--------NNFLRICYDDAIR 284
           +  E ++  V +E +    +          NF R+   D I+
Sbjct: 280 DLCEGIISSVCQEVNGTTDIEYDGVQLSLKNFQRVHMVDMIK 321



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL GA ++R+V LFP
Sbjct: 452 ALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILFP 487


>gi|13752518|gb|AAK38703.1|AF359587_1 aspartyl-tRNA synthetase [Oryzias latipes]
          Length = 95

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H ++++ +   +  I  E +++       +F+ G PPH G   
Sbjct: 10  YDMFMRGEEILSGAQRVHDAQLLTERAQHHQIDLEKIKSYID----SFRYGAPPHAGGGI 65

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 66  GLERVCMLYLGLHNVRQTSMFP 87


>gi|224133182|ref|XP_002327980.1| predicted protein [Populus trichocarpa]
 gi|222837389|gb|EEE75768.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 138/345 (40%), Gaps = 73/345 (21%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE 68
           D G+  VG  + + GWV  +R    + F+++ D   ++  Q V + ++  ++  +S    
Sbjct: 109 DEGLDRVGKTIIVMGWVRTLRVQSSVTFIEVNDGSCLSNLQCVMDLEAEGYDQVES---- 164

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIE-----ILSVAEELP-LPVFGEREYPE 122
                 GLV + ++  +   ++  Q   S QK+E     I++V +  P  P+  +R   E
Sbjct: 165 ------GLVTTGASIWMQGTVVKSQ--GSKQKVELKVIKIVAVGKSDPSYPIQKKRVSRE 216

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDF 180
            +R K     LR  T     V R R  +     +   EN F+  S+PI+TAS  EGA + 
Sbjct: 217 FLRTKAH---LRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCEGAGEQ 273

Query: 181 LVPSRVNQGS------------------------FYALPQAPQQYKQL---LMASGFDRY 213
              + +  GS                        F+  P       QL     A+     
Sbjct: 274 FCVTTLIPGSQEAANSPVDGIPKTKDGLIDWSQDFFGKPAFLTVSGQLNAETYATALSDV 333

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT----MENVLRGVFE------E 263
           +   P FR E+  + R   EF+ ++ E++F + +D +      ++ V+R + E      E
Sbjct: 334 YTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYVVRHILENCKEDME 393

Query: 264 FSN-----------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           F N            + V  +F+++ Y DAI      K     P+
Sbjct: 394 FFNTWIEKGIIDRLSDVVEKDFVQLTYTDAIELLLKAKKKFEFPL 438


>gi|46198664|ref|YP_004331.1| asparaginyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|59798550|sp|Q72KF7|SYN_THET2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|46196287|gb|AAS80704.1| asparaginyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 438

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 108/247 (43%), Gaps = 28/247 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V L GW+++ R  G I FL +RD  G  Q   V      A F  A  +  E  L + G V
Sbjct: 16  VELRGWLYQRRSKGKIHFLILRDGTGFLQATVVQGEVPEAVFREADHLPQETALRVWGRV 75

Query: 78  MS-RSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRR 135
              R A         G  EL+ + ++++S  + E P+   G +E+       +R L LR 
Sbjct: 76  REDRRA--------PGGFELAVRDLQVVSRPQGEYPI---GPKEHGIDFLMDHRHLWLR- 123

Query: 136 DTLHKNIVKRTRIINSMRCRMIAE-----NFIECSTPILTASSPEGARDFLVPSRVNQGS 190
              H+      RI + +  R I E      F+    PILT S+ EG  + L    +  G 
Sbjct: 124 ---HRRPFAVMRIRDELE-RAIHEFFGERGFLRFDAPILTPSAVEGTTE-LFEVELFDGE 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L Q+ Q Y +   A  F + +   P FR E  ++ R   EF+ ++ E++F+  ++ +
Sbjct: 179 KAYLSQSGQLYAE-AGALAFAKVYTFGPTFRAERSKTRRHLLEFWMVEPEVAFMTHEENM 237

Query: 251 NTMENVL 257
              E ++
Sbjct: 238 ALQEELV 244



 Score = 37.4 bits (85), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 15/86 (17%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPHG 537
           L   G+ EI  G  R H  E++ +     G+ +EV +      RFG +         PH 
Sbjct: 354 LAPEGYGEIIGGSQRIHDLELLRRKIQEFGLPEEVYDWYLDLRRFGSV---------PHS 404

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G++R V  + G  +VRE   FP
Sbjct: 405 GFGLGLERTVAWICGLAHVREAIPFP 430


>gi|325684154|gb|EGD26347.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 327

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 19/156 (12%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           R RI  +       E F++   P+L  S+PEG  +       +  ++  L Q+ Q Y ++
Sbjct: 35  RNRIFKATVDFFENEGFVKFDAPLLMHSAPEGTTELFHIDYFDHDAY--LSQSGQLYGEV 92

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV---- 260
             A  F + F   P FR E  ++ R   EF+ ++ EM+++ QD+ L+  E  L  V    
Sbjct: 93  -GAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDESLDLQERFLSYVVGQV 151

Query: 261 -----FEEFSNGNTVSN-------NFLRICYDDAIR 284
                +E    G  +         N+ R+ YDDA++
Sbjct: 152 LEHCEYELSILGRDLDKLRPAAEGNYTRLSYDDAVK 187


>gi|240172842|ref|ZP_04751501.1| lysyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 499

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 5/155 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           PLPV   +E  E  R + R++DL      + + + R  +I ++R  +    F+E  TP+L
Sbjct: 145 PLPV-AHKEMSEEARVRQRYVDLIVRPQARGVARQRIAVIRAIRNALERRGFVEVETPML 203

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T +    AR F+  S       Y L  AP+ + +  +  GFDR F++   FR+E   S 
Sbjct: 204 QTLAGGAAARPFVTHSNALDMDLY-LRIAPELFLKRCIVGGFDRVFELNRVFRNEGADST 262

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
             P EF  L+   ++   DD       +++ V +E
Sbjct: 263 HSP-EFSMLETYQTYGTYDDSAVVTRELIQEVADE 296


>gi|224058914|ref|XP_002190814.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 224

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 1/49 (2%)

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
           GA++FLVPSR   G FY+LPQ+PQQ+KQLLM  G DR        R  D
Sbjct: 52  GAKEFLVPSR-EAGKFYSLPQSPQQFKQLLMVGGLDRRLSTEEATRWAD 99


>gi|163815695|ref|ZP_02207067.1| hypothetical protein COPEUT_01876 [Coprococcus eutactus ATCC 27759]
 gi|158449000|gb|EDP25995.1| hypothetical protein COPEUT_01876 [Coprococcus eutactus ATCC 27759]
          Length = 685

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 115/240 (47%), Gaps = 28/240 (11%)

Query: 92  GQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRII 149
           G+I + A++I +LS + + LP    G  +    +R++ R++DL  +   K + +KR++I+
Sbjct: 164 GEISIHAEEITLLSKSLQMLPEKFHGLTDT--DMRYRQRYVDLIMNQDSKEVFIKRSQIL 221

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ------APQQYKQ 203
             +R  +   +F+E  TP+L +++   A      +R  +  + AL +      + + Y +
Sbjct: 222 KEIRNFLAGRDFMEVETPMLVSNAGGAA------ARPFETHYNALDEDVKLRISLELYLK 275

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            L+  G +R ++I   FR+E   +   P EF  +++  ++ +   ++   E++ R + E+
Sbjct: 276 RLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYYGMMELTESMFRYLAEK 334

Query: 264 FSNGNTVSNN---------FLRICYDDAIRRY-GTDKPDLRNPIIMHNVT-EHFVHSEFR 312
                 +S N         F R+   DAI++Y G D   + +      +  EH V  E R
Sbjct: 335 VCGSTKISYNGIEIDFGKPFERLTMVDAIKKYTGVDFDQVADDAEAKKIADEHHVEYEER 394



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 29/41 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+VMLL  ++ +R+V LFP  ++ 
Sbjct: 493 ALEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLFPTMKSL 533


>gi|323165009|gb|EFZ50799.1| OB-fold nucleic acid binding domain protein [Shigella sonnei 53G]
 gi|332757613|gb|EGJ87946.1| OB-fold nucleic acid binding domain protein [Shigella flexneri
          2747-71]
 gi|332766843|gb|EGJ97044.1| OB-fold nucleic acid binding domain protein [Shigella flexneri
          2930-71]
          Length = 85

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)

Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDG 75
          +G  V L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G
Sbjct: 1  MGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTG 60

Query: 76 LVMSRSAETINA 87
           V +R  + + A
Sbjct: 61 TVRARDEKILTA 72


>gi|301107430|ref|XP_002902797.1| lysyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262097915|gb|EEY55967.1| lysyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 651

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 115/260 (44%), Gaps = 9/260 (3%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           +SDV   V ++G +H  R  G  ++F D+R      Q+++  D   +E  ++      + 
Sbjct: 111 LSDV--IVSVAGRLHSKRASGSKLVFYDLRADGKKLQIMS--DVGTYESPEAFAQIHSIL 166

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G ++        +    G++ +  Q++ +LS    +           +  R++ R+LD
Sbjct: 167 RRGDIVGVKGHPGKSK--KGELSIFPQQLVLLSPCMHMLPKSHAGLTLQQDTRYRQRYLD 224

Query: 133 LRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           L  +   + + + R +IIN +R  +  +NF+E  TP++            V    +    
Sbjct: 225 LIMNDDSRGVFQTRAKIINFIRRFLDEKNFLEVETPMMNMIVGGATAKPFVTYHNDLHMN 284

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +  AP+ Y + L+  G DR ++I   FR+E       P EF   +  M++ + +D++ 
Sbjct: 285 LFMRVAPELYLKQLVIGGLDRVYEIGRQFRNEGIDLTHNP-EFTSCEFYMAYADYNDLMT 343

Query: 252 TMENVLRGVFEEFSNGNTVS 271
             E +   + +E + G T++
Sbjct: 344 MTEKLFSEMVKEITGGYTIT 363



 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   G+DR+ M L    N++EV LFP
Sbjct: 526 AMEYGLPPTAGWGCGVDRLTMFLSNRFNIKEVLLFP 561


>gi|229153855|ref|ZP_04281986.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228629659|gb|EEK86355.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 499

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/303 (21%), Positives = 132/303 (43%), Gaps = 38/303 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  I+D +G  Q+    D+     +E+ K+     ++ I+G +
Sbjct: 63  VSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKTADLGDLVGIEGKI 122

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--- 133
              +          G++ + A    +L+ +   LP    G ++  +  R++ R+LDL   
Sbjct: 123 FKTNV---------GELSVKATGFTLLTKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITS 171

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
              R+T     V R++II  MR  +    ++E  TP++ A +    AR F+         
Sbjct: 172 MESRETF----VTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHHNALDME 227

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI+
Sbjct: 228 LY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDIM 285

Query: 251 NTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
              EN++  + ++     T+            + R+   DAI+ +     D  NP+ + +
Sbjct: 286 KLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWTRLHMVDAIKEHSG--ADFWNPMSVED 343

Query: 302 VTE 304
             E
Sbjct: 344 ARE 346



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|262197158|ref|YP_003268367.1| lysyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262080505|gb|ACY16474.1| lysyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 561

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 10/248 (4%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  +RL+G +   R  G  +F  IRD  G  Q+  N D     + +    + +  +D + 
Sbjct: 68  GETIRLAGRLVARRGFGKTVFAPIRDSSGDLQLFLNVD----HLDQDAFEKLLPRLD-VG 122

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
               AE +      G++ L      ILS +   PLP   +       R++ R+LDL  + 
Sbjct: 123 DQVGAEGVIFWTKRGELSLLCTHFHILSKSLR-PLPDKWKGLTNVETRYRQRYLDLAVNP 181

Query: 138 LHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
             + +  KR++I+  +R    A  F+E  TP++        AR F+        + Y L 
Sbjct: 182 EVREVFRKRSQILRGLRRFFDARAFLEVETPMMHPVIGGAAARPFVTHHNALDLTLY-LR 240

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GFDR ++I   FR+E       P EF  L+   ++ +  D+++  E 
Sbjct: 241 IAPELYLKRLLVGGFDRVYEINRSFRNEGLSRAHNP-EFTMLEFYQAYADYRDLMDLTEE 299

Query: 256 VLRGVFEE 263
           +   + +E
Sbjct: 300 LFTELAQE 307



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+ MLL G  ++R+V LFP
Sbjct: 515 RALEVGMPPAAGEGIGIDRLTMLLTGQSSIRDVILFP 551


>gi|228905873|ref|ZP_04069771.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228853813|gb|EEM98572.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 499

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 141/330 (42%), Gaps = 50/330 (15%)

Query: 5   RTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RT+S  DL VS  G F           V ++G +   R  G   F  I+D +G  Q+   
Sbjct: 37  RTNSTTDL-VSLYGEFSKEELEEKEITVAIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVR 95

Query: 54  PDSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EE 109
            D+     +E+  +     ++ I+G V   +          G++ + A    +L+ +   
Sbjct: 96  KDTVGDEEYELFTTADLGDLVGIEGKVFKTNV---------GELSVKATGFTLLTKSLRP 146

Query: 110 LPLPVFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           LP    G ++  +  R++ R+LDL      R+T     V R++II  MR  +    ++E 
Sbjct: 147 LPDKYHGLKDVEQ--RYRQRYLDLITSMESRETF----VTRSKIIREMRRYLDDNGYLEV 200

Query: 165 STPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP++ A +    AR F           Y +  A + + + L+  G ++ ++I   FR+E
Sbjct: 201 ETPMMHAIAGGASARPFTTHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NF 274
              +   P EF  +++  ++ + +DI+   EN++  + ++     T+            +
Sbjct: 260 GVSTRHNP-EFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEINLEPEW 318

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            R+   DAI+++     D  NP+ +    E
Sbjct: 319 TRLHMVDAIKQHSG--ADFWNPMSVEEARE 346



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|322376864|ref|ZP_08051357.1| lysine--tRNA ligase [Streptococcus sp. M334]
 gi|321282671|gb|EFX59678.1| lysine--tRNA ligase [Streptococcus sp. M334]
          Length = 496

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 112/251 (44%), Gaps = 19/251 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D      ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G VM             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEVMRTDM---------GELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRFLDQKGFLEVETPVLHNEAGGAAARPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQ 282

Query: 248 DILNTMENVLR 258
           DI++  E +++
Sbjct: 283 DIMDLTEGIIQ 293



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|315613067|ref|ZP_07887978.1| lysine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315177|gb|EFU63218.1| lysine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 496

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    D      +EI K       L ++G VM 
Sbjct: 65  IAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFKKADLGDFLGVEGEVMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A  I  LS A   PLP  F      E+I ++ R+LDL   R+
Sbjct: 125 TD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKRYLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     Q     L  
Sbjct: 174 SFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQDIMDLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|156309317|ref|XP_001617688.1| hypothetical protein NEMVEDRAFT_v1g225882 [Nematostella vectensis]
 gi|156195285|gb|EDO25588.1| predicted protein [Nematostella vectensis]
          Length = 287

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 17/235 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-GLVM 78
           V ++G +   R  G   F +++D  G  QV  N D  C    K++ +E +   +D G  +
Sbjct: 49  VVIAGRLMSRRIQGKASFAELQDAEGRVQVYFNRDEICLGDDKTLYNEVYKKLLDIGDFV 108

Query: 79  SRSAETINANIITGQIELSAQKIEILSVA-EELPLP-------VFGEREYPESIRFKYRF 130
               E     +  G+  +  +   +LS A + LPLP        F E   PE +R++ R+
Sbjct: 109 GVEGELFTTKV--GEKSVRVKNFTLLSKALKPLPLPKTDAEGNTFDEFNDPE-LRYRQRY 165

Query: 131 LDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
            DL  +   K + VKRT++ N+MR       + E  TPIL        AR F+       
Sbjct: 166 ADLVVNPHVKEVFVKRTKLFNAMREFFNNAGYFEVETPILQPIPGGAAARPFITHHNSLD 225

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +S+
Sbjct: 226 IPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVSY 278


>gi|300783136|ref|YP_003763427.1| lysyl-tRNA synthetase, class II [Amycolatopsis mediterranei U32]
 gi|299792650|gb|ADJ43025.1| lysyl-tRNA synthetase, class II [Amycolatopsis mediterranei U32]
          Length = 1107

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 22/254 (8%)

Query: 10  GDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           GDL   +  G  VR++G V  +R  GG+ F  ++D  G  Q++        E  +   + 
Sbjct: 658 GDLAPDTTTGHRVRIAGRVLNLRILGGLCFARVKDFSGEIQLM-------LEAGELDLTR 710

Query: 69  WVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           W   +D G  +  S + + +     + ELS    E    A+ L PLP   +       R 
Sbjct: 711 WRTGVDLGDHVGVSGQVVTSK----RGELSVLVDEWTVTAKCLHPLPDKRKGLTDPETRV 766

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +    N+++ R+ ++ ++R R+   +++E  TP+L T      AR F+   
Sbjct: 767 RQRYLDLAVNPDSTNMLRLRSTVVRAVRDRLHHADYLEVETPMLQTVHGGANARPFVTHI 826

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L  +G +R F++   FR+E   +   P EF  L+   ++ 
Sbjct: 827 NAYDMRMY-LRIAPELYLKRLCVAGVERVFELNRNFRNEGVDATHNP-EFTMLEAYQAYA 884

Query: 245 EQDDILNTMENVLR 258
           + D    TM  + R
Sbjct: 885 DYD----TMRTLTR 894



 Score = 43.9 bits (102), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 13/93 (13%)

Query: 479  AFQYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DL+  G E+ +           R  +    L+A S    + E+ E+       A +
Sbjct: 1014 AERWDLIAFGSEVGTAYTELTDPIEQRRRLEGQSLRAASGDVEAMELDED----FLLALE 1069

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             GMPP GG+  G+DR++M+L GA ++R+  LFP
Sbjct: 1070 HGMPPTGGLGLGVDRLLMMLTGA-SIRQTVLFP 1101


>gi|240047435|ref|YP_002960823.1| Lysyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985007|emb|CAT05000.1| Lysyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 490

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 7/185 (3%)

Query: 91  TGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRI 148
           T Q+ L      +L+ + + LP   +G  +  E  +++ R+LDL  +T  ++  +KR+RI
Sbjct: 118 TQQLSLHVSDFLLLTKSLKPLPDQYYGLSDQEE--KYRKRYLDLIVNTKTRDTFIKRSRI 175

Query: 149 INSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           ++ +R     +N++E  TP+L        AR F+         +Y         K+LL+ 
Sbjct: 176 VSYIRHFFDNQNYLEVDTPVLQPILGGASARPFITHYNSLHRDYYLRIATELPLKKLLVG 235

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            G DR ++I   FR+E   +   P EF  ++   ++   + ++   EN+ + + E+ +N 
Sbjct: 236 -GIDRVYEIGKIFRNEGVDTTHNP-EFTSIEFYQAYANLETMMQQTENLFQFLIEKINNS 293

Query: 268 NTVSN 272
           N V N
Sbjct: 294 NPVLN 298



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 23/32 (71%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP GG   GIDR+VML    +++REV L+P
Sbjct: 452 GLPPAGGCGIGIDRLVMLFTNNESIREVILYP 483


>gi|170059943|ref|XP_001865582.1| aspartyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167878527|gb|EDS41910.1| aspartyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 550

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 117/287 (40%), Gaps = 25/287 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G  + G  V++ GWVHR+R  G G++F+ +RD  G  Q V   D+ C        +  VL
Sbjct: 122 GGENRGIRVKIYGWVHRLRRQGKGLMFVTLRDGTGFLQCVLT-DARC-----QTYNAVVL 175

Query: 72  CIDGLV--MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
             +  V       E        G  EL     E++ +A           +    ++   R
Sbjct: 176 STESSVRLFGTLKEVPEGKTAPGGHELHVDYWELIGLAPAGGADTLLNEDANPDVQLDNR 235

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            + +R +   K +  R  I+ + R       + E + P L  +  EG       +   + 
Sbjct: 236 HIMIRGENTSKVLKMRDVIMQAFRAHYQDRGYTEVTPPTLVQTQVEGGSTLFKLNYFGEE 295

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE---- 245
           +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+     
Sbjct: 296 AF--LTQSSQLYLETCIPALGD-VFCIAQSYRAEQSRTRRHLAEYSHVEAECPFISFDDL 352

Query: 246 ----QDDILNTMENVLRG----VFEEFSNGNTVSNN-FLRICYDDAI 283
               +D +++T++ VL+     + +E + G       F R+ Y +AI
Sbjct: 353 LDRLEDLVVDTVDRVLKSPHGHLVQELNPGFVPPKRPFRRMNYSEAI 399



 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  +E +L  +   GI  +     +    R +  G  PHGG   G+
Sbjct: 467 LLPNVGEIVGGSMRSWDNEELLAGYKREGIDPKPY--YWYTDQRVY--GTQPHGGYGLGL 522

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  LL   ++REV L+P     C
Sbjct: 523 ERFMCWLLNRYHIREVCLYPRFLERC 548


>gi|156229920|gb|AAI52078.1| Zgc:154056 protein [Danio rerio]
          Length = 168

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H ++++ +   +  I  E ++        +F+ G PPH G   
Sbjct: 83  YDMFMRGEEILSGAQRIHDAQLLTERAMHHNIDLEEIK----AYIDSFRYGAPPHAGGGI 138

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  NVR+ S+FP
Sbjct: 139 GLERVTMLYLGLHNVRQTSMFP 160


>gi|85860098|ref|YP_462300.1| lysyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85723189|gb|ABC78132.1| lysyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 542

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 110/243 (45%), Gaps = 17/243 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLVMS 79
           L+G +  +R  G   F++I+D  G  Q   + +S   A + + K +    ++ I G  + 
Sbjct: 105 LAGRMMAIRNFGKAAFINIQDRKGRIQAYLHRNSIGDASYALFKRLDVGDIVFIGGRPIR 164

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                      TG++ + A +  +LS A   PLP           R++ R +DL  +   
Sbjct: 165 TK---------TGELTIEADEFMLLSKAIR-PLPEKWHGLTDVETRYRQRHVDLIVNPKV 214

Query: 140 KNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQA 197
           + + + R+RIIN++R  M   +F+E  TP++   +    AR F           Y L  A
Sbjct: 215 REVFITRSRIINAIRQFMDERDFLEVETPMMQPKAGGATARPFETHHNALGMDLY-LRIA 273

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  G +R ++I   FR+E   +   P EF  ++   ++   +D+++  E + 
Sbjct: 274 PELYLKRLITGGMERVYEINRNFRNEGISTFHNP-EFTMMEFYQAYATYEDLMDMTEELF 332

Query: 258 RGV 260
             V
Sbjct: 333 ASV 335



 Score = 41.2 bits (95), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 23/37 (62%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           R  +  MPP  G   GIDR+VML   + ++R+V LFP
Sbjct: 496 RVLEYAMPPTAGEGIGIDRLVMLFTDSPSIRDVILFP 532


>gi|261250317|ref|ZP_05942893.1| lysyl-tRNA synthetase (class II) [Vibrio orientalis CIP 102891]
 gi|260939433|gb|EEX95419.1| lysyl-tRNA synthetase (class II) [Vibrio orientalis CIP 102891]
          Length = 510

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 106/216 (49%), Gaps = 18/216 (8%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRII 149
           G + ++ +  E+L+ A   PLP        + +R++ R++DL   +D+    I+ R++++
Sbjct: 133 GDLYVNMESYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNQDSREAFII-RSKLV 190

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           +++R  M ++ ++E  TP++    P GA  R F+          Y L  AP+ Y + L+ 
Sbjct: 191 SAIRNFMSSKGYLEVETPMMHVI-PGGATARPFITHHNALDIDMY-LRVAPELYLKRLVV 248

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            GFDR F+I   FR+E   S R   EF  ++   ++ +  D+++  E +L  V  +    
Sbjct: 249 GGFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTVAMDVLGS 307

Query: 268 NTV---------SNNFLRICYDDAIRRYGTDKPDLR 294
            ++            + R+   DAI++Y  +  +++
Sbjct: 308 TSMPYGDETVEFGGQYARLSMFDAIKQYNPEHAEIQ 343



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ ML      +R+V LFP
Sbjct: 469 ALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFP 504


>gi|215445821|ref|ZP_03432573.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|294996590|ref|ZP_06802281.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 210]
          Length = 1111

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 23/230 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC- 58
           R  +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+   +  D  C 
Sbjct: 647 RPPSHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCA 706

Query: 59  --FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  A  +       ++      +++T   ++I     L  + +         PLP   
Sbjct: 707 ADFNAATDLGD----LVEMTGHMGASKTGTPSLIVSGWRLIGKCLR--------PLPNKW 754

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL      
Sbjct: 755 KGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGG 814

Query: 175 EGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AR F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 815 ATARPFV--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 862



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 41/214 (19%)

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----IAGDPLKFCSFAADARNHI 420
            E  +++G+ PV + ++   +EA+  R+D   G +        AG P +    A      +
Sbjct: 925  EPVDISGIWPV-RTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLEL 983

Query: 421  AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             + L  + C   +  + +DFP             + +P T P     S +G       A 
Sbjct: 984  YEHL--VECRTEQPTFYIDFPT------------SVSPLTRPH---RSKRG------VAE 1020

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +  
Sbjct: 1021 RWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAMEYA 1076

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1077 MPPTGGLGMGIDRVVMLITG-RSIRETLPFPLAK 1109


>gi|195398059|ref|XP_002057642.1| GJ17991 [Drosophila virilis]
 gi|194141296|gb|EDW57715.1| GJ17991 [Drosophila virilis]
          Length = 558

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 116/288 (40%), Gaps = 25/288 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEW 69
           G     + V++ GWVHR+R  G  ++F+ +RD  G  Q V N D  C  +E         
Sbjct: 130 GTEQRNTRVKIYGWVHRLRRQGKSLMFITLRDGTGFLQCVLN-DLLCQTYEALMLSTEST 188

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           VL    L +    +T       G  EL+    E++ +A           E    ++   R
Sbjct: 189 VLLYGTLRLLPEGKT-----APGGHELNVDYWELIGLAPPGGADAILNEEAHPDVQLDNR 243

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            + +R +   K +  R+ ++ + R   I   + E + P L  +  EG           + 
Sbjct: 244 HIMIRGENTSKVLKMRSVVMQAFRGHYIERGYNEVTPPTLVQTQVEGGSTLFKMQYFGEE 303

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV----- 244
           ++  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+     
Sbjct: 304 AY--LTQSSQLYLETCLPALGD-VFTIAQSYRAEQSRTRRHLAEYTHIEAECPFITFDDL 360

Query: 245 ---EQDDILNTMENVLRG-----VFEEFSNGNTVSNNFLRICYDDAIR 284
               +D + + ++ VL+      V E   +       F R+ Y DAI+
Sbjct: 361 LDRLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPKKPFRRMPYADAIK 408


>gi|311030950|ref|ZP_07709040.1| lysyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 485

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 117/272 (43%), Gaps = 16/272 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y  +  G L   D  S VR++G +  +R      F+ I D  G  Q++   D    E A 
Sbjct: 32  YELYEAGSL--QDGTSGVRVAGRIMGIRQFSKFSFITISDIQGKLQLLLKKDEVG-ERAM 88

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S   ++    D + +     +   N  T +IE     + +      LP    G       
Sbjct: 89  SDFLDYFDIGDFIGVEGKMYSTKTNEKTLRIE---NYVLLGKTLHTLPDKWHGLTN--TD 143

Query: 124 IRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            R++ R++DL      +N ++ RT+++ ++R  +  ++F+E  TP+L  +S  GA     
Sbjct: 144 TRYRQRYIDLMMTKETQNRMLMRTKLVRAVRRFLEEKDFLEVETPVLQHTSS-GA--LAR 200

Query: 183 PSRVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           P +    S      L  AP+ Y + L+  GF + F+ A CFR+E      L  EF  ++ 
Sbjct: 201 PFKTYHNSLDMELNLRIAPETYLKRLIVGGFTKVFEFAKCFRNEGISPQHLQ-EFTMVEG 259

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
             +F   +D +  M  ++  V ++  +   +S
Sbjct: 260 YAAFWNYEDTMQLMREMIVYVLKQTFDSTVIS 291


>gi|308373201|ref|ZP_07431378.2| LOW QUALITY PROTEIN: lysyl-tRNA synthetase 2 lysX [Mycobacterium
           tuberculosis SUMu005]
 gi|308374363|ref|ZP_07435759.2| LOW QUALITY PROTEIN: lysyl-tRNA synthetase 2 lysX [Mycobacterium
           tuberculosis SUMu006]
 gi|308338531|gb|EFP27382.1| LOW QUALITY PROTEIN: lysyl-tRNA synthetase 2 lysX [Mycobacterium
           tuberculosis SUMu005]
 gi|308342201|gb|EFP31052.1| LOW QUALITY PROTEIN: lysyl-tRNA synthetase 2 lysX [Mycobacterium
           tuberculosis SUMu006]
          Length = 1102

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 23/230 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC- 58
           R  +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+   +  D  C 
Sbjct: 638 RPPSHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCA 697

Query: 59  --FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  A  +       ++      +++T   ++I     L  + +         PLP   
Sbjct: 698 ADFNAATDLGD----LVEMTGHMGASKTGTPSLIVSGWRLIGKCLR--------PLPNKW 745

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL      
Sbjct: 746 KGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGG 805

Query: 175 EGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AR F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 806 ATARPFV--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 853



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 41/214 (19%)

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----IAGDPLKFCSFAADARNHI 420
            E  +++G+ PV + ++   +EA+  R+D   G +        AG P +    A      +
Sbjct: 916  EPVDISGIWPV-RTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLEL 974

Query: 421  AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             + L  + C   +  + +DFP             + +P T P     S +G       A 
Sbjct: 975  YEHL--VECRTEQPTFYIDFPT------------SVSPLTRPH---RSKRG------VAE 1011

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +  
Sbjct: 1012 RWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAMEYA 1067

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1068 MPPTGGLGMGIDRVVMLITG-RSIRETLPFPLAK 1100


>gi|120437254|ref|YP_862940.1| lysyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|254782473|sp|A0M5H8|SYK_GRAFK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|117579404|emb|CAL67873.1| lysyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 569

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 117/265 (44%), Gaps = 20/265 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-G 75
           G  V ++G +   R  G   F +++D  G  QV  N D  C    KS  ++ +   +D G
Sbjct: 53  GKNVVIAGRLMSRRIQGKASFAELQDSKGRIQVYFNRDEICTGEDKSKYNDLYKKLLDIG 112

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-------EYPESIRFK 127
             +    E     +  G++ +  +   +LS A   LPLP   +          PE  R++
Sbjct: 113 DFIGIEGELFKTQV--GEMTVMVKDFHLLSKALRPLPLPKTDKEGNTHDGFNDPEQ-RYR 169

Query: 128 YRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPS 184
            R+ DL  +   K I VKRT++ N+MR       + E  TPIL  S P G  AR F+   
Sbjct: 170 QRYADLAVNPKVKEIFVKRTKLFNAMRNFFNEREYFEVETPIL-QSIPGGAAARPFVTHH 228

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ 
Sbjct: 229 NALDIPLY-LRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYK 286

Query: 245 EQDDILNTMENVLRGVFEEFSNGNT 269
           + + ++   E +L    E   NG T
Sbjct: 287 DYNWMMEFTEQLLEHCAEAV-NGTT 310



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           R+ + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 462 RSLEYGMPPTSGLGIGMDRLIMFLTNKQSIQEVLFFP 498


>gi|323719901|gb|EGB29014.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis CDC1551A]
          Length = 1083

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 23/230 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC- 58
           R  +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+   +  D  C 
Sbjct: 619 RPPSHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCA 678

Query: 59  --FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  A  +       ++      +++T   ++I     L  + +         PLP   
Sbjct: 679 ADFNAATDLGD----LVEMTGHMGASKTGTPSLIVSGWRLIGKCLR--------PLPNKW 726

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL      
Sbjct: 727 KGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGG 786

Query: 175 EGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AR F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 787 ATARPFV--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 834



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 41/214 (19%)

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----IAGDPLKFCSFAADARNHI 420
            E  +++G+ PV + ++   +EA+  R+D   G +        AG P +    A      +
Sbjct: 897  EPVDISGIWPV-RTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLEL 955

Query: 421  AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             + L  + C   +  + +DFP             + +P T P     S +G       A 
Sbjct: 956  YEHL--VECRTEQPTFYIDFPT------------SVSPLTRPH---RSKRG------VAE 992

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +  
Sbjct: 993  RWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAMEYA 1048

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1049 MPPTGGLGMGIDRVVMLITG-RSIRETLPFPLAK 1081


>gi|215404058|ref|ZP_03416239.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215411286|ref|ZP_03420094.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|218753346|ref|ZP_03532142.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|254550646|ref|ZP_05141093.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|297634193|ref|ZP_06951973.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|313658512|ref|ZP_07815392.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
          Length = 1111

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 23/230 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC- 58
           R  +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+   +  D  C 
Sbjct: 647 RPPSHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCA 706

Query: 59  --FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  A  +       ++      +++T   ++I     L  + +         PLP   
Sbjct: 707 ADFNAATDLGD----LVEMTGHMGASKTGTPSLIVSGWRLIGKCLR--------PLPNKW 754

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL      
Sbjct: 755 KGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGG 814

Query: 175 EGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AR F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 815 ATARPFV--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 862



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 41/214 (19%)

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----IAGDPLKFCSFAADARNHI 420
            E  +++G+ PV + ++   +EA+  R+D   G +        AG P +    A      +
Sbjct: 925  EPVDISGIWPV-RTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLEL 983

Query: 421  AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             + L  + C   +  + +DFP             + +P T P     S +G       A 
Sbjct: 984  YEHL--VECRTEQPTFYIDFPT------------SVSPLTRPH---RSKRG------VAE 1020

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +  
Sbjct: 1021 RWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAMEYA 1076

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1077 MPPTGGLGMGIDRVVMLITG-RSIRETLPFPLAK 1109


>gi|296328765|ref|ZP_06871279.1| asparagine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296154100|gb|EFG94904.1| asparagine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 461

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 120/304 (39%), Gaps = 51/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV ++R      F+++ D   +   Q+V       F+    +     + + G+++
Sbjct: 19  IELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEISRLSIASTIKVKGVLV 78

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                       +GQ +E+ A KIEI   A+ L  P+  +R   E +R K   L  R +T
Sbjct: 79  KSQG--------SGQDLEVKADKIEIFQKAD-LEYPLQNKRHTFEYLRTKAH-LRARTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVN- 187
                  R+ +  ++       NF+   TPI+T S  EGA +           VP + N 
Sbjct: 129 FSAVFRVRSVLAYALHKFFQENNFVYVHTPIITGSDAEGAGEMFRITTLDLNKVPKKENG 188

Query: 188 ----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+          QL      + F   +   P FR E   + R   EF+ ++ E
Sbjct: 189 EVDFSKDFFGKSTNLTVSGQLNGETYCAAFRNIYTFGPTFRAEYSNTARHASEFWMIEPE 248

Query: 241 MSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLRICY 279
           ++F + +  +   E +++ + +          EF N            N ++N+F R+ Y
Sbjct: 249 IAFGDLNANMELAEAMVKYIIKYVMDNCPEEMEFFNSFIEKGLFDKLNNVLNNDFGRVTY 308

Query: 280 DDAI 283
            +AI
Sbjct: 309 TEAI 312



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 15/91 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  EI  G  R    E++ +    +G+ +E  E      RFG           PH
Sbjct: 376 DLLAPGIGEIIGGSQREDNYELLTKRMKELGLKEEDYEFYLDLRRFGSF---------PH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R++M L G +N+R+V  FP + N
Sbjct: 427 SGYGLGFERMMMYLTGMQNIRDVIPFPRTPN 457


>gi|116621920|ref|YP_824076.1| asparaginyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|122254422|sp|Q023P9|SYN_SOLUE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116225082|gb|ABJ83791.1| asparaginyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 461

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/287 (21%), Positives = 115/287 (40%), Gaps = 32/287 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V   GWV   R    + F+ + D       QVV +      ++   + +   + ++G
Sbjct: 17  GESVTARGWVKTRRDSKNVHFIQLNDGSSPVDLQVVLDAGVVPEDVVAKITTGACISVEG 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            ++        A++  GQ +E+ A+ + +   A+    P+  ++   E++R +   L  R
Sbjct: 77  DLV--------ASMGKGQAVEIKARALTVHGTADPEHYPLQKKKHTLETLR-ELGHLRTR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIA----ENFIECSTPILTASSPEGA--------RDFLV 182
            +T         R+ N++ C +        F+   TP+++AS  EGA         D   
Sbjct: 128 SNTFGAVF----RVRNALACAIHKFFQDRGFMYVHTPVISASDAEGAGSMFQVTTLDLQS 183

Query: 183 PSRVN-QGSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           P   +  G F+          Q +  + A  F   +   P FR E+  + R   EFY ++
Sbjct: 184 PKPADFTGDFFGKHTYLTVSGQLEAEIFAHAFANVYTFGPTFRAENSNTPRHLAEFYMIE 243

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            EM+F +  D  +  E  L+   E   N      +FL   YD  +R+
Sbjct: 244 PEMAFCDLKDNQDLAEAFLKSQVEYVVNACGPDLDFLAKWYDPELRK 290



 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 17/105 (16%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV---GISKEVVE-----N 520
           ++GND     A    L     EI  G  R    +V+LQ    +   G+ +E         
Sbjct: 360 MRGNDDGKTVAAMDVLAPRIGEIIGGSQREERHDVLLQRIREMAAHGLREEAYWWYLDLR 419

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           RFGG+          H G   G +R++M L G KN+R+V  FP +
Sbjct: 420 RFGGV---------EHAGFGMGFERMLMYLTGMKNIRDVIPFPRT 455


>gi|227505952|ref|ZP_03936001.1| lysyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227197474|gb|EEI77522.1| lysyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 533

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 12/245 (4%)

Query: 30  VRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMSRSAETINAN 88
           +R  G + F  ++D  G TQV A    A  EI +   + W   +D G  +S     I + 
Sbjct: 97  MRNTGKLCFATLQDGDG-TQVQAMLSLA--EIGEEQLAAWKSDVDLGDFISVRGRVIASR 153

Query: 89  IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTR 147
              G++ + A K   ++     PLPV    +  E  R + R+ DL  R+   KN + R +
Sbjct: 154 --RGELSIMATKW-TMAAKSLRPLPV-AFADMNEETRVRQRYNDLIVREEARKNAMTRVK 209

Query: 148 IINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
           ++ ++R  +  + F+E  TP+L T      AR F+  S       Y L  AP+ Y +  +
Sbjct: 210 VMRALRNYLEDQGFVEIETPMLQTLHGGAAARPFVTHSNALDIDLY-LRIAPELYLKRAV 268

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
             G DR F+I   FR+E       P EF  L+   ++ + +D   T    ++ V +    
Sbjct: 269 VGGIDRVFEINRNFRNEGVDRSHSP-EFAMLETYAAWGDYNDCARTTRESIQAVAQAVFG 327

Query: 267 GNTVS 271
            + V+
Sbjct: 328 SHKVT 332



 Score = 40.4 bits (93), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        I+    E   +  +       V++  F     A + GM
Sbjct: 442 KWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMVLDEDF---LAAMEQGM 498

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   G+DR++M L G   +RE  LFP+
Sbjct: 499 PPTAGTGMGMDRLLMALTGL-GIRETVLFPI 528


>gi|114320955|ref|YP_742638.1| lysyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227349|gb|ABI57148.1| lysyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 499

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 113/247 (45%), Gaps = 15/247 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR++G +   R  G   F  ++D  G  Q+    D    E+ + V  ++     G ++  
Sbjct: 61  VRVAGRMMAKRVMGKASFTHLQDQSGRIQLFLARD----ELPEGVYQQFKGWDVGDIIGA 116

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-RRDTL 138
           +         T + ELS +  E+  + + L PLP           R++ R++DL   D  
Sbjct: 117 AGTLFR----TRKGELSVKVDELRLLTKSLRPLPEKYHGLTDTEARYRQRYVDLIMNDDS 172

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQ 196
            +  + R+R++  +R  +    F+E  TP++    P GA  R F+          Y L  
Sbjct: 173 RRVFMLRSRLVAGIRDFLNGRGFLEVETPMMQ-PIPGGATARPFVTHHNALGADLY-LRV 230

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF++ ++I   FR+E   +   P EF  L+   ++ + +D+++  E +
Sbjct: 231 APELYLKRLVVGGFEQVYEINRNFRNEGVSTRHNP-EFTMLEFYQAYADHNDLMDLTEAM 289

Query: 257 LRGVFEE 263
           LR + EE
Sbjct: 290 LRRLAEE 296



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L+  G EIA+G    + +E   + F      K   ++          RA + G+PP 
Sbjct: 405 RFELIVGGREIANGFSELNDAEDQAERFRAQAAEKAAGDDEAMHYDADFIRALEYGLPPT 464

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML   A ++R+V LFP
Sbjct: 465 AGEGIGIDRLVMLFADAPSIRDVLLFP 491


>gi|295087515|emb|CBK69038.1| asparaginyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
          Length = 447

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 117/300 (39%), Gaps = 56/300 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V ++GWV   R    I F+ I D   +   Q+VA  +    +  K V +   + +DG+  
Sbjct: 18  VSVNGWVRTHRQSKNISFIAINDGSTVHNLQIVAEHEKIKKDFLKLVTTGSAIRVDGMFA 77

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
             +    +  II       AQ I +   A+         +EYP  ++ K   LD  R+  
Sbjct: 78  LSTGNQQHGEII-------AQNIVLYGTADP--------QEYP--LQKKEHSLDFLRNIA 120

Query: 139 HKNIVKRTRIINS---MRCRMI--------AENFIECSTPILTASSPEGARDFLVPSRVN 187
           H  +  RT I  +   MR  M            F   +TPI+T S  EGA +        
Sbjct: 121 HLRL--RTNIFGAIFRMRHNMAFAIHRYFNERGFFYFNTPIITTSDSEGAGELFEVKTEL 178

Query: 188 QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           +  F+  P       QL   L A      +  +P FR E+  + R   EF+ ++ E++F 
Sbjct: 179 KDDFFGSPANLTVSGQLEGELGALALGAIYTFSPTFRAENSNTFRHLSEFWMIEPEVAFN 238

Query: 245 EQDDILNTMENVLRGVFE----------EFSNGN-----------TVSNNFLRICYDDAI 283
           + +D ++  E+ L+ +             F N N             +N F+R+ Y  AI
Sbjct: 239 DINDNMDLAEDFLKYLIRYALENCESDLAFLNDNVDNGLMDKLHFVANNEFMRLPYSKAI 298


>gi|225011412|ref|ZP_03701850.1| lysyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225003915|gb|EEG41887.1| lysyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 564

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 21/257 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE---WVLCID 74
           G  V L+G +   R  G   F ++ D  G  QV  N D  C    K++ +E    +L I 
Sbjct: 47  GKAVVLAGRLMSRRIQGKASFAELLDSSGRVQVYFNRDEICIGEDKTLYNEVYKKLLDIG 106

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP-------VFGEREYPESIRF 126
            ++  +   T+   ++ G+  +   +  +L+ A   LPLP        F E   PE +R+
Sbjct: 107 DIIGVKG--TLFTTMV-GEQTVKVTEFTVLNKALRPLPLPKTDADGNSFDEFNDPE-LRY 162

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP 183
           + R++DL  +   KN  ++R++I  ++R  +  + ++E  TPIL    P GA  R F+  
Sbjct: 163 RQRYVDLIVNPKVKNTFLQRSKITTAIRDFLTEKEYLEVETPIL-QPIPGGATARPFVTH 221

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  A + Y + L+  GF+  F+ A  FR+E       P EF  +++ +++
Sbjct: 222 HNALNTPLY-LRIANELYLKRLIVGGFEGVFEFAKDFRNEGMDRTHNP-EFTVMELYVAY 279

Query: 244 VEQDDILNTMENVLRGV 260
            +   ++ T E +L  +
Sbjct: 280 KDYFWMMETTEELLEKI 296



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  GI  GIDR+VML+    +++EV  FP
Sbjct: 456 RALEYGMPPTSGIGIGIDRLVMLMTNNSSIQEVLFFP 492


>gi|306829416|ref|ZP_07462606.1| lysine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304428502|gb|EFM31592.1| lysine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 496

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    D      +EI K       L ++G VM 
Sbjct: 65  IAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDEVGEQNYEIFKKADLGDFLGVEGEVMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A  I  LS A   PLP  F      E+I ++ R+LDL   R+
Sbjct: 125 TD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKRYLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     Q     L  
Sbjct: 174 SFDR-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E++
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQDIMDLTEDI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|215430532|ref|ZP_03428451.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
          Length = 1111

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 23/230 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC- 58
           R  +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+   +  D  C 
Sbjct: 647 RPPSHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCA 706

Query: 59  --FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  A  +       ++      +++T   ++I     L  + +         PLP   
Sbjct: 707 ADFNAATDLGD----LVEMTGHMGASKTGTPSLIVSGWRLIGKCLR--------PLPNKW 754

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL      
Sbjct: 755 KGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGG 814

Query: 175 EGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AR F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 815 ATARPFV--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 862



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 41/214 (19%)

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----IAGDPLKFCSFAADARNHI 420
            E  +++G+ PV + ++   +EA+  R+D   G +        AG P +    A      +
Sbjct: 925  EPVDISGIWPV-RTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLEL 983

Query: 421  AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             + L  + C   +  + +DFP             + +P T P     S +G       A 
Sbjct: 984  YEHL--VECRTEQPTFYIDFPT------------SVSPLTRPH---RSKRG------VAE 1020

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +  
Sbjct: 1021 RWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAMEYA 1076

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1077 MPPTGGLGMGIDRVVMLITG-RSIRETLPFPLAK 1109


>gi|322374407|ref|ZP_08048921.1| lysine--tRNA ligase [Streptococcus sp. C300]
 gi|321279907|gb|EFX56946.1| lysine--tRNA ligase [Streptococcus sp. C300]
          Length = 496

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    D      +EI K       L ++G VM 
Sbjct: 65  IAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFKKADLGDFLGVEGEVMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A  I  LS A   PLP  F      E+I ++ R+LDL   R+
Sbjct: 125 TD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKRYLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     Q     L  
Sbjct: 174 SFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQDIMDLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|315638751|ref|ZP_07893924.1| lysine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481160|gb|EFU71791.1| lysine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 502

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 125/291 (42%), Gaps = 18/291 (6%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D    V ++G V  +R  G  IF +I D     Q+  + DS   E     +    L +  
Sbjct: 53  DEKVLVSIAGRVKLLRIAGKSIFANIEDESENVQIYFSKDSIGEEQFNLFKKN--LEVGD 110

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +++++    +      G+  L   ++ IL+    +PLP           R++ R++D+  
Sbjct: 111 IILAKGYPFLTK---MGEFSLHISEL-ILATKSIVPLPEKFHGLTDIEQRYRKRYVDMIM 166

Query: 136 DT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           +  + K+   R++I++ +R     + F+E  TP++   +        V      G    L
Sbjct: 167 NADVRKDFFTRSKIVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNALGVERFL 226

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ + + L+  GF+  F+I  CFR+E       P EF  ++   ++    D+++  E
Sbjct: 227 RIAPELHLKRLIVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWTYHNYRDLMDLTE 285

Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGT-DKPDLRN 295
            +   + +E +    +         S  F RI Y +A+++YG  DK  + N
Sbjct: 286 ELFALLLKELNLETKITFDDKIIDFSKPFERISYKEALKKYGNLDKELIEN 336



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL G K++R+V LFP
Sbjct: 453 ALGYGMPPTAGEGIGIDRLVMLLTGKKSIRDVILFP 488


>gi|42779156|ref|NP_976403.1| lysyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206977926|ref|ZP_03238813.1| lysyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217957653|ref|YP_002336195.1| lysyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222093847|ref|YP_002527896.1| lysyl-tRNA synthetase [Bacillus cereus Q1]
 gi|229136923|ref|ZP_04265551.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|229194467|ref|ZP_04321271.1| Lysyl-tRNA synthetase [Bacillus cereus m1293]
 gi|81411375|sp|Q73FD1|SYK_BACC1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226737092|sp|B7HPY8|SYK_BACC7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|42735071|gb|AAS39011.1| lysyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206743832|gb|EDZ55252.1| lysyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217064281|gb|ACJ78531.1| lysyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221237894|gb|ACM10604.1| lysyl-tRNA synthetase [Bacillus cereus Q1]
 gi|228589057|gb|EEK47071.1| Lysyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228646588|gb|EEL02794.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|324324067|gb|ADY19327.1| lysyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 499

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/303 (21%), Positives = 131/303 (43%), Gaps = 38/303 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  I+D +G  Q+    D+     +E+ K+     ++ I+G V
Sbjct: 63  VSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKTADLGDLVGIEGKV 122

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--- 133
              +          G++ + A    +L+ +   LP    G ++  +  R++ R+LDL   
Sbjct: 123 FKTNV---------GELSVKATGFTLLTKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITS 171

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
              R+T     V R++II  MR  +    ++E  TP++ A +    AR F+         
Sbjct: 172 MESRETF----VTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHHNALDME 227

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI+
Sbjct: 228 LY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDIM 285

Query: 251 NTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
              EN++  + ++     T+            + R+   DAI+ +     D  NP+ +  
Sbjct: 286 KLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWTRLHMVDAIKEHSG--ADFWNPMSVEE 343

Query: 302 VTE 304
             E
Sbjct: 344 ARE 346



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|320583689|gb|EFW97902.1| Mitochondrial asparaginyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 469

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 130/294 (44%), Gaps = 38/294 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +G  ++L+GWV  +R    + F+D+ D   +G  + V  P S    I K++ +   + I 
Sbjct: 38  IGDKIKLNGWVKSLRISKNVAFVDLVDGSSHGDIKCVVRPPSL---IPKALNTGAGVQIS 94

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF--KYRFLD 132
           G+      +      +T Q E    +I++    EEL  P+  +    + +R   +YR+  
Sbjct: 95  GVWTEGKGKQNFELQVTEQPE---SQIQVYGGVEEL-YPLQKKTHSSQFLRSIPEYRW-- 148

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARD-FLVPSRVNQGS 190
             R     +I++ +  + S   +   E+ F +   P +T+S  EGA + F + S    GS
Sbjct: 149 --RVPEAGSILRMSSKLESSFSKFFDEHSFFKTHPPTVTSSDCEGAGELFRIESDSKLGS 206

Query: 191 ---FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              F+   A      Q    ++ +   R + + PCFR E+  ++R   EF+ L+ E++F+
Sbjct: 207 REQFFGKKAYMTVSTQLHLEVLCAALGRVWTLTPCFRAEESDTNRHLSEFWMLEAEIAFI 266

Query: 245 EQDDILNTM-ENVLRGV--------FEEFSNGNT------VSNNFLRICYDDAI 283
           +    L    E +LR V        F+EFS           +  + +I Y +AI
Sbjct: 267 DDVSQLTRFSEEMLRYVARTLQNSGFDEFSEETKQRWDMLANGTYTQITYSEAI 320



 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 23/38 (60%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G  PHGG   G +R++  + GA+N+R+   FP + N C
Sbjct: 430 GSVPHGGFGMGFERLLQYMSGAENIRDTIPFPRTTNHC 467


>gi|295106037|emb|CBL03580.1| Lysyl-tRNA synthetase (class II) [Gordonibacter pamelaeae 7-10-1-b]
          Length = 660

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 31/271 (11%)

Query: 6   THSCGDL-----GVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----AN 53
           +H   DL     G+ D  S    V+++G +   R  G + FL++RD  G  Q+     A 
Sbjct: 44  SHHLADLAAQYEGLEDGASTSDEVKVAGRIMAKRDQGKLAFLELRDSSGDMQLFCRINAL 103

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            + A  E+      +W+  + G +M             GQ+ ++    E+LS +   PLP
Sbjct: 104 GEDAFAELKDLDVGDWI-GVRGTMMRTK---------RGQLSVAVDSFELLSKSLR-PLP 152

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA- 171
                   +  R++ R++DL  +   K+   KR +I+ ++R  M    + E  TPIL   
Sbjct: 153 EKFHGLADKETRYRQRYVDLVMNPEVKSTFEKRFKIVAAIRRYMEDHGYYEVETPILHPI 212

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDR 229
                AR F+         FY L  A + + + L+  GF++ F+I   FR+E  DP  + 
Sbjct: 213 LGGANARPFVTHHNALDKDFY-LRIATELHLKRLIVGGFEKVFEIGRQFRNEGMDPYHNP 271

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
              EF  ++   +F + + ++   + V++  
Sbjct: 272 ---EFTTMEFYQAFSDLEGMMELTQGVVQAA 299



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR+ MLL  A ++R+V LFP
Sbjct: 460 RALEYGMPPAGGCGIGIDRLAMLLTDAPSIRDVLLFP 496


>gi|296439735|sp|B8ZRJ4|LYSX_MYCLB RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|296439736|sp|Q9CC23|LYSX_MYCLE RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
          Length = 1133

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 98/228 (42%), Gaps = 25/228 (10%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D    V +SG + R+R +GG++F  +RD  G  QV+   D+   E     
Sbjct: 673 SHTVAQALDADDEGTVSISGRILRIRDYGGVLFAHVRDWSGEIQVLL--DNLVLECC--- 727

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-------PLPVFGER 118
                 CI     +     I    +TG +  S      L V           PLP   + 
Sbjct: 728 ------CIADFTAAIDLGDIVE--MTGNMGFSKNGTRSLIVRNWRLIGKCLRPLPNKWKG 779

Query: 119 EYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                 R + R++DL  +T  +N I+ R+ ++ S+R  + A+ F+E  TPIL        
Sbjct: 780 LTDPEARVRTRYVDLAVNTESRNLIMARSCVLRSVREMLFAKGFVEVETPILQQIHGGAT 839

Query: 177 ARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           AR F   +R+N       L  AP+ Y + L   G +R F++   FR+E
Sbjct: 840 ARPF--ATRINTYDMDLFLRIAPELYLKRLCIGGVERVFELGRAFRNE 885



 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +
Sbjct: 1041 AERWDLVAWGIELGTAYSELTDPVEQRRRLHEQSLLAVGGNPEAMELDED----FLQAME 1096

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1097 YAMPPTGGLGMGIDRLVMLITG-RSIRETLPFPLAK 1131


>gi|219557559|ref|ZP_03536635.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|260200703|ref|ZP_05768194.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T46]
          Length = 1111

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 23/230 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC- 58
           R  +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+   +  D  C 
Sbjct: 647 RPPSHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCA 706

Query: 59  --FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  A  +       ++      +++T   ++I     L  + +         PLP   
Sbjct: 707 ADFNAATDLGD----LVEMTGHMGASKTGTPSLIVSGWRLIGKCLR--------PLPNKW 754

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL      
Sbjct: 755 KGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGG 814

Query: 175 EGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AR F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 815 ATARPFV--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 862



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 41/214 (19%)

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----IAGDPLKFCSFAADARNHI 420
            E  +++G+ PV + ++   +EA+  R+D   G +        AG P +    A      +
Sbjct: 925  EPVDISGIWPV-RTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLEL 983

Query: 421  AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             + L  + C   +  + +DFP             + +P T P     S +G       A 
Sbjct: 984  YEHL--VECRTEQPTFYIDFPT------------SVSPLTRPH---RSKRG------VAE 1020

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +  
Sbjct: 1021 RWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAMEYA 1076

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1077 MPPTGGLGMGIDRVVMLITG-RSIRETLPFPLAK 1109


>gi|303312585|ref|XP_003066304.1| asparaginyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240105966|gb|EER24159.1| asparaginyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320033593|gb|EFW15540.1| asparaginyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 578

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 106/244 (43%), Gaps = 13/244 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VHR+R    +IF+ + D YG  Q V   D      A ++  E  + + G +
Sbjct: 153 GTRVRVLGRVHRLRSQKDVIFVTLSDGYGFLQCVFTGDLVKTYDAMTLTLETSIAVHGEM 212

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLDL 133
            +   +    +      EL A    ++  A    E +   V  + + P+++ +  R L L
Sbjct: 213 CAVPPKQHAPD----NRELHADFFTVIGRAAGDKEAITTRVAPDAD-PQTL-YDNRHLVL 266

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +     +  R  +I + R     +  +E + P +  +  EG           + ++  
Sbjct: 267 RGEIASSVMKVRAAVIRAFRSAFEEQRMLEVTPPAMVQTQVEGGSTLFSFDYYGEPAY-- 324

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  + S  D  F I P FR E   + R   E+  ++ E+ F+  DD+L+ +
Sbjct: 325 LTQSSQLYLETCLPSLGD-VFCICPSFRAEKSLTRRHLSEYTHIEAELDFITFDDLLDHL 383

Query: 254 ENVL 257
           E ++
Sbjct: 384 EVII 387


>gi|153952771|ref|YP_001393536.1| asparaginyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219853437|ref|YP_002470559.1| hypothetical protein CKR_0094 [Clostridium kluyveri NBRC 12016]
 gi|189083270|sp|A5N4F7|SYN_CLOK5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|146345652|gb|EDK32188.1| AsnS [Clostridium kluyveri DSM 555]
 gi|219567161|dbj|BAH05145.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 463

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/310 (22%), Positives = 123/310 (39%), Gaps = 63/310 (20%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDG-LV 77
           + +SGW+  +R      F+++ D   +   QVV +     F+    +     L ++G L+
Sbjct: 21  IEISGWIRTIRDSKSFAFIELNDGSFFKNVQVVLDDKIENFKEIIKLPISSSLSVEGTLI 80

Query: 78  MSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++ +A+           E+ A+KI +  + + E PL    +R   E +R       LR  
Sbjct: 81  LTPNAKQ--------SFEIKAKKISLEGNSSSEYPLQ--KKRHTLEYLR---TIAHLRPR 127

Query: 137 TLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           +   + V R R I +         ++F+  +TPI+T S  EGA +     R+       +
Sbjct: 128 SNTFSAVFRVRSIAAYAVHKFFQEKDFVYVNTPIITGSDCEGAGEMF---RITTMDLNNV 184

Query: 195 PQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           P+                       Q     MA  F   +   P FR ED  + R   EF
Sbjct: 185 PKEEDNSVDFSKDFFGKETNLTVSGQLSAETMALAFRNVYTFGPTFRAEDSNTSRHAAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNN 273
           + ++ EM+F E  D ++T E +++ +              F  F +        N V++ 
Sbjct: 245 WMIEPEMAFAELKDYMDTAEELVKYIINYVLEKAPEEMAFFNSFIDKSLFDRLNNVVNSE 304

Query: 274 FLRICYDDAI 283
           F RI Y +A+
Sbjct: 305 FGRITYTEAV 314



 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G  R     V+ +  S  G++KE     +       + G   H G   
Sbjct: 378 DLLVPGVGEIVGGSQREERLSVLEKRISEFGLNKE----DYWWYLELRKYGETKHSGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +RI+M + G  N+R+V  FP +
Sbjct: 434 GFERILMYITGMSNIRDVIPFPRT 457


>gi|126435577|ref|YP_001071268.1| lysyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|296439667|sp|A3Q0V0|LYSX_MYCSJ RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|126235377|gb|ABN98777.1| lysyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 1111

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 17/207 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G V R+R +GG++F  +RD  G  Q++   D++  E   +      + +  L+ +   
Sbjct: 674 VAGRVLRIRDYGGVLFAQLRDWSGEVQLLL--DNSTLEQGSTADFTAAIDLGDLIEATGT 731

Query: 83  ETINAN----IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
              + N    ++     L+ + +         PLP   +    +  R + R++DL  +T 
Sbjct: 732 MGYSKNGTRSLLVRHWRLTGKCLR--------PLPDKWKGLTDQEARVRARYVDLAVNTE 783

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
            +++++ R+ +++++R  +  + F+E  TPIL        AR FL          Y L  
Sbjct: 784 ARDLIRARSGVLHAIRDTLYHKGFLEVETPILQQIHGGANARPFLTHINAYDLDLY-LRI 842

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDE 223
           AP+ Y + L   G +R F++   FR+E
Sbjct: 843 APELYLKRLCVGGVERVFELGRAFRNE 869



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 7/93 (7%)

Query: 479  AFQYDLVCNGFEIASGGIR-----NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
            A ++DLV  G E+ +              +  Q+    G   E +E     L +A +  M
Sbjct: 1019 AERWDLVAWGVELGTAYSELTDPVEQRRRLQAQSLLAAGGDPEAMELDEDFL-QAMEYAM 1077

Query: 534  PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            PP GG+  G+DR+VML+ G +++RE   FP+++
Sbjct: 1078 PPTGGLGMGVDRVVMLITG-RSIRETLPFPLAR 1109


>gi|167751088|ref|ZP_02423215.1| hypothetical protein EUBSIR_02073 [Eubacterium siraeum DSM 15702]
 gi|167656006|gb|EDS00136.1| hypothetical protein EUBSIR_02073 [Eubacterium siraeum DSM 15702]
          Length = 503

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 25/267 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW- 69
           +L   DV    R++ W    R  G   F+DIRD  G  QV    D    +  K  + +W 
Sbjct: 62  ELEEKDVMIAGRITSW----RDMGKANFIDIRDDSGRMQVYVRIDDIGEDNFKEFK-KWD 116

Query: 70  ---VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-GEREYPESIR 125
              ++ + G V              G+I + A+ I++LS +       + G ++  E  R
Sbjct: 117 LGDIVGVSGFVFKTR---------RGEISVHAKSIKLLSKSLLPLPEKWHGLKDKEE--R 165

Query: 126 FKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP 183
           ++ R+LDL  +  +    VKR+ I+  +R  + ++ ++E  TP+L T      AR F+  
Sbjct: 166 YRKRYLDLIANPEIKDTFVKRSMILREIRSFLDSKGYLEVDTPVLHTLEIGAAARPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L    + Y + L+  GFDR +++   FR+E   +   P EF  ++M  ++
Sbjct: 226 HNALDIDMY-LRIETELYLKRLIVGGFDRVYEVGRIFRNEGMDATHNP-EFTSIEMYQAY 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTV 270
            +   +++ +E + R V  +    +TV
Sbjct: 284 TDYYGMMDLIEEMYRTVALKVCGTDTV 310



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 8/65 (12%)

Query: 514 SKEVVENRFGG--------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           +K+V+E R  G           A + G+PP GG+  G+DR VMLL  + ++R+V LFP  
Sbjct: 439 TKQVMEKRKQGANAQIDEDFLTALEYGLPPTGGLGMGLDRFVMLLTDSASIRDVLLFPTM 498

Query: 566 QNFCD 570
           +   D
Sbjct: 499 KPLSD 503


>gi|317131158|ref|YP_004090472.1| lysyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469137|gb|ADU25741.1| lysyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 505

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 109/250 (43%), Gaps = 23/250 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCI 73
           G  V ++G +   R  G   F+D+ D  G  QV    +    E   S + +W    ++ +
Sbjct: 66  GKEVSIAGRLMSRRDMGKANFIDVHDATGRMQVYVRVNDVGEESFASFK-KWDIGDIVGV 124

Query: 74  DGLVM-SRSAE-TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            G V  +R  E +I+A  +T   +      E     ++  L            R++ R+L
Sbjct: 125 KGKVFRTRRGEISIHATAVTLLSKSLLPLPEKFHGLKDTEL------------RYRQRYL 172

Query: 132 DLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +  + +  V+R+RII  +R  +  + FIE  TPIL        AR F+        
Sbjct: 173 DLIMNPEVKETFVRRSRIIAFIRSFLEQKGFIEVETPILNVIPGGAAARPFITHHNTLDM 232

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  G ++ F+I   FR+E       P EF  +++  ++ + + +
Sbjct: 233 DLY-LRIAPELYLKRLIVGGMEKVFEIGRLFRNEGIDVKHNP-EFTSIEIYQAYTDYNGM 290

Query: 250 LNTMENVLRG 259
           +   E ++ G
Sbjct: 291 MRLTEELVAG 300



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 464 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 499


>gi|262382421|ref|ZP_06075558.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262295299|gb|EEY83230.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 468

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 110/271 (40%), Gaps = 34/271 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L     G+ V + GWV   R    + F+ + D   I   Q+V + D    E  
Sbjct: 6   RTKIVDVLKSDAFGTTVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDVDKLGDEFL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K + +   + ++G++     +  N       +E+ A +IEI   A+    P+   ++   
Sbjct: 66  KPITTGASISVNGILTQSQGKGQN-------VEIQATEIEIFGTADPATYPL---QKKGH 115

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGA-RD 179
           S+ F      LR  T     V R R  +  ++        F    TPI+TAS  EGA + 
Sbjct: 116 SMEFLREIAHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQM 175

Query: 180 FLVPSR-------------VNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDE 223
           F V ++             + +  F+    +     QL   L A+   + +   P FR E
Sbjct: 176 FQVTTKNLYDLKKDENGSIIYEDDFFGKQASLTVSGQLEGELAATALGQIYTFGPTFRAE 235

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           +  + R   EF+ ++ E++F   +DI + ME
Sbjct: 236 NSNTPRHLAEFWMIEPEVAF---NDITDNME 263


>gi|145518141|ref|XP_001444948.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124412381|emb|CAK77551.1| unnamed protein product [Paramecium tetraurelia]
          Length = 647

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 114/253 (45%), Gaps = 27/253 (10%)

Query: 20  FVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSV--RSEWVL 71
           FV ++G V  +R  G  ++F D++      QV+AN          FE   ++  R + + 
Sbjct: 147 FVSVAGRVVTIRSMGAKLMFYDLQGEGTKIQVMANEANHKDQEYSFEKVHTLIKRGDIIG 206

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
                 ++++ E    +I  G I+L +  + +L  A       FG +++ +  R++ R+L
Sbjct: 207 VKGNPCLTKAGEL---SIAPGFIQLLSPTLHMLPTAH------FGFKDHEQ--RYRMRYL 255

Query: 132 DLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL  +   ++I + R+ +I  +R     + FIE  TP L             P +    S
Sbjct: 256 DLIMNKKVRDIFLTRSSVIKQLREYFDGKGFIEVETPSLNVIQGGATAK---PFKTFHNS 312

Query: 191 FYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
            +    +  AP+ Y ++L+  G DR ++I   FR+E       P EF  ++   ++ + +
Sbjct: 313 LHRDLFMRVAPELYLKMLIVGGLDRVYEIGKNFRNEGIDQTHNP-EFTAMEFYWAYCDYN 371

Query: 248 DILNTMENVLRGV 260
           D++   E VL  +
Sbjct: 372 DLMTVTEEVLSSI 384



 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 25/40 (62%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G  ++ +  +PP  G   GIDR VMLL   +N++EV LFP
Sbjct: 571 GFIKSLEHALPPTAGWGLGIDRFVMLLTDTQNIQEVLLFP 610


>gi|169775127|ref|XP_001822031.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
 gi|238496255|ref|XP_002379363.1| aspartyl-tRNA synthetase Dps1, putative [Aspergillus flavus
           NRRL3357]
 gi|83769894|dbj|BAE60029.1| unnamed protein product [Aspergillus oryzae]
 gi|220694243|gb|EED50587.1| aspartyl-tRNA synthetase Dps1, putative [Aspergillus flavus
           NRRL3357]
          Length = 557

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 76/174 (43%), Gaps = 32/174 (18%)

Query: 95  ELSAQKI-EILSVAEELPLPVF-GEREYPESI------------------RFKYRFLDLR 134
           EL  +K+  I   A++LP+ V   ER  PE+                   R   R LDL+
Sbjct: 176 ELHIRKVYTIAEAAQQLPMQVKDAERPPPETTEEGNEVDADGVPIVTLKTRLDNRVLDLQ 235

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECS-----TPILTASSPEGARDFLVPSRVNQG 189
            +T      +    I+S    + AE  I+       TP L +S+ EG  +        + 
Sbjct: 236 TET-----SQAITWISSGVAELFAEYMIKSGSRWIFTPKLVSSATEGGSNVFEVKYFKRN 290

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            + A  Q+PQ YKQ+ +A   +  F+IAP FR ED  + R   EF  LD E +F
Sbjct: 291 GYLA--QSPQLYKQMCIAGDMESVFEIAPVFRAEDSNTHRHLTEFSGLDFEKTF 342



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 4/83 (4%)

Query: 482 YDLVCNGFEIASGGIR-NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           YD    G EI SG  R N ++E+M ++    GI+ +  +  F     AF+ G PPH G  
Sbjct: 470 YDFFMRGEEIMSGAQRINDVNELM-ESMRAKGINPD--QEGFEDYLNAFRQGCPPHAGGG 526

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            G++RIVM  LG  NVR  +LFP
Sbjct: 527 LGLNRIVMFFLGLPNVRLATLFP 549


>gi|66828391|ref|XP_647550.1| asparagine-tRNA ligase [Dictyostelium discoideum AX4]
 gi|74859257|sp|Q55FI3|SYNM_DICDI RecName: Full=Proabable asparaginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS;
           Flags: Precursor
 gi|60475568|gb|EAL73503.1| asparagine-tRNA ligase [Dictyostelium discoideum AX4]
          Length = 460

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/333 (22%), Positives = 131/333 (39%), Gaps = 59/333 (17%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCID 74
           +G  +++ GWV  +R    + F+++ D   I   Q+V + DS                  
Sbjct: 26  IGKEIKVKGWVRNIRNQKSVSFIELGDGSSIKGLQIVGDKDS----------------FS 69

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            L    S E +N  +I     L   K E + V    P  + G       ++ K    +  
Sbjct: 70  KLKYGSSIE-VNGKLINS---LGNDK-EAIEVQLTEPYKLIGNCPDCYPLQPKNHSFEFL 124

Query: 135 RDTLH----KNIVKRTRIINSMRCRMIAE-----NFIECSTPILTASSPEGA-RDFLVPS 184
           RD  H     N +     + +   ++I +      FI   TPI+TAS  EG    F + S
Sbjct: 125 RDIAHIRSRGNSIGALLRVRNKSTQLIHQYFNDNGFINVHTPIITASDCEGGGEQFQIKS 184

Query: 185 RVN--QGSFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
            ++  +  F+  P       Q +  + A    R +   P FR E   + R   EF+ ++ 
Sbjct: 185 SLDTKESMFFGQPSFLTVSGQLEAEIYACSHSRVYTFGPTFRAEKSNTPRHLSEFWMIEP 244

Query: 240 EMSFVEQDDILNTMEN----VLRGVFE------EFSNG-----------NTVSNNFLRIC 278
           EM+F++ +D L+  E+    ++R + +      EF N             T+S  F+R+ 
Sbjct: 245 EMAFIDLNDNLDIAEDFCKYLIRNLLDSCKEDIEFFNKRIDTNLLSRLEKTLSTPFIRLE 304

Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
           Y DAI+    +   ++    +    E F+ + F
Sbjct: 305 YKDAIQLLQNNNHPIKWGDDIQREQEKFITTHF 337



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G IR    + +L   + +G+ K+    ++       + G  PHGG   G +R +  
Sbjct: 383 ELIGGSIREERYDKLLNTINEMGMDKD----QYSWYLDLRKYGTVPHGGFGLGFERFLQF 438

Query: 550 LLGAKNVREVSLFPMSQNFC 569
           + G +N+++V   P  QN+C
Sbjct: 439 VTGLQNIKDVIPIPRHQNYC 458


>gi|288801458|ref|ZP_06406911.1| asparagine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331669|gb|EFC70154.1| asparagine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 467

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/277 (20%), Positives = 116/277 (41%), Gaps = 36/277 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  +D G+ V + GWV   R    + F+ + D   I   Q+V +P +    + 
Sbjct: 6   RTKVAEALKRTDFGATVNVKGWVRTHRSSKAVDFIALYDGSTINSIQIVIDPTAFDESLL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYP 121
           K + +       G  +S   E + +      +E+  + IEI  +   + P+   G+    
Sbjct: 66  KQITT-------GSCISVVGELVESQGSGQNVEILGKSIEIYGLCGSDYPMQKKGQT--F 116

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R ++  L LR ++    +  R  +  ++        F    TPI+TAS  EGA +  
Sbjct: 117 EYMR-QHAHLRLRTNSFGAVMRIRHNMAIAIHQYFHEHGFYYFHTPIITASDAEGAGEMF 175

Query: 182 VPSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFR 221
              +V   + Y L +  +                    Q +  L A+   + +   P FR
Sbjct: 176 ---QVTTKNLYDLKKDDEGHITYNDDFFGKMTSLTVSGQLEGELGATALGQIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            E+  + R   EF+ ++ E++F++ +++++  E+ ++
Sbjct: 233 AENSNTPRHLAEFWMIEPEVAFIDLNELMDLEEDFIK 269


>gi|110834509|ref|YP_693368.1| lysyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|110647620|emb|CAL17096.1| Lysyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 504

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 8/156 (5%)

Query: 111 PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
           PLP   +       R++ R++DL    DT  K    R +I+  +R  ++ ++F+E  TP+
Sbjct: 150 PLPEKHKGLTDTEARYRQRYVDLIVNEDT-RKTFQIRAKIVAGIRNFLVQKDFVEAETPM 208

Query: 169 LTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           L    P GA  R F+          Y L  AP+ Y + L+  GF++ F+I   FR+E   
Sbjct: 209 LQVI-PGGATARPFITHHNSLDMDMY-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGLS 266

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           +   P EF  L+   +F +  D++N  E +LR + E
Sbjct: 267 TRHNP-EFTMLEFYQAFGDYHDLMNLTEEMLRTLAE 301



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 462 ALEHGLPPTAGEGIGIDRLVMLFTDAPSIRDVILFP 497


>gi|55980677|ref|YP_143974.1| asparaginyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|66774175|sp|P54263|SYN_THET8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|55772090|dbj|BAD70531.1| asparaginyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 438

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 108/247 (43%), Gaps = 28/247 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V L GW+++ R  G I FL +RD  G  Q   V      A F  A  +  E  L + G V
Sbjct: 16  VELRGWLYQRRSKGKIHFLILRDGTGFLQATVVQGEVPEAVFREADHLPQETALRVWGRV 75

Query: 78  MS-RSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRR 135
              R A         G  EL+ + ++++S  + E P+   G +E+       +R L LR 
Sbjct: 76  REDRRA--------PGGFELAVRDLQVVSRPQGEYPI---GPKEHGIDFLMDHRHLWLR- 123

Query: 136 DTLHKNIVKRTRIINSMRCRMIAE-----NFIECSTPILTASSPEGARDFLVPSRVNQGS 190
              H+      RI + +  R I E      F+    PILT S+ EG  + L    +  G 
Sbjct: 124 ---HRRPFAVMRIRDELE-RAIHEFFGERGFLRFDAPILTPSAVEGTTE-LFEVELFDGE 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L Q+ Q Y +   A  F + +   P FR E  ++ R   EF+ ++ E++F+  ++ +
Sbjct: 179 KAYLSQSGQLYAE-AGALAFAKVYTFGPTFRAERSKTRRHLLEFWMVEPEVAFMTHEENM 237

Query: 251 NTMENVL 257
              E ++
Sbjct: 238 ALQEELV 244



 Score = 37.4 bits (85), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 15/86 (17%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPHG 537
           L   G+ EI  G  R H  E++ +     G+ +EV +      RFG +         PH 
Sbjct: 354 LAPEGYGEIIGGSQRIHDLELLRRKIQEFGLPEEVYDWYLDLRRFGSV---------PHS 404

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G++R V  + G  +VRE   FP
Sbjct: 405 GFGLGLERTVAWICGLAHVREAIPFP 430


>gi|332022079|gb|EGI62404.1| Asparaginyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 516

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 117/278 (42%), Gaps = 23/278 (8%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-AKSVRSEWVLCIDGLVM 78
           V+L GWVHR+R  G  ++F+ +RD  G  Q V   D  C    A ++ +E  + + G ++
Sbjct: 96  VKLYGWVHRLRRQGKALMFITLRDGTGFLQCVLT-DKLCQTYNALTLATEAAVQLFG-IL 153

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               E  NA    G  ELS    E++  +           E    ++   R + +R +  
Sbjct: 154 KAVPEGKNA---PGDHELSVDYWELVGSSPPGGADSILNEEALPDVQLDNRHIMIRGENT 210

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
            + ++ R+ ++ ++R       + E + P L  +  EG           + +F  L Q+ 
Sbjct: 211 SRILIMRSILMQAVRDHYKDRGYHEVTPPTLVQTQVEGGSTLFKLDYFGEPAF--LTQSS 268

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV--------EQDDIL 250
           Q Y +  + +  D Y  IA  +R E  R+ R   E+  ++ E  F+         +D I 
Sbjct: 269 QLYLETCLPAMGDVYC-IAQSYRAEQSRTRRHLAEYTHIEAECPFITFDDLLDRLEDLIC 327

Query: 251 NTMENVLRG-----VFEEFSNGNTVSNNFLRICYDDAI 283
           + +E VL+      V E   N       F R+ Y DAI
Sbjct: 328 DVVERVLKTSLGHLVKELNPNFQIPKKPFKRMNYSDAI 365


>gi|257440518|ref|ZP_05616273.1| lysine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257197022|gb|EEU95306.1| lysine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 503

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 19/250 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +D G  V L+G +   R  G   F  +RD  G  Q+    D    E+ +   + +     
Sbjct: 61  TDSGKQVALAGRMMSKRVMGKASFAHLRDDKGDIQLYVRRD----ELGEEAYAAFKKLDV 116

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL 133
           G ++    E       TG  ELS +  E+  +A+ L PLP          +R++ R++DL
Sbjct: 117 GDIIGVKGEVFRTK--TG--ELSVRATELTLLAKSLRPLPEKFHGLTDTEMRYRQRYVDL 172

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV-PSRVNQGS 190
             +   K+  VKR++I+  +R  +  + F+E  TPILT       AR F    + +N   
Sbjct: 173 IANPEVKDTFVKRSQILKEIRAYLDEKGFLEVDTPILTPFEIGASARPFYTHHNSLNMD- 231

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDD 248
              L    + Y + L+  G DR +++   FR+E  DP+ +    EF  +++  +F +   
Sbjct: 232 -MVLRIETELYLKRLIVGGMDRVYEVGRIFRNEGMDPKHN---PEFTSIELYQAFTDFHG 287

Query: 249 ILNTMENVLR 258
           +++ +E + +
Sbjct: 288 MMDLVEELYK 297



 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 461 ALEYGLPPTGGLGFGVDRLVMLLTDSASIRDVLLFP 496


>gi|108709562|gb|ABF97357.1| Lysyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 528

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 77/152 (50%), Gaps = 4/152 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R+LDL  +   ++I K R+++++ +R  +   +F+E  TP++   +    AR 
Sbjct: 176 QETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDGLDFLEVETPMMNMIAGGAAARP 235

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  AP+ Y + L+  G DR ++I   FR+E       P EF   + 
Sbjct: 236 FVTHHNELNMRLY-MRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTTCEF 293

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
            M++ + +D++   E +L G+ +E + G  + 
Sbjct: 294 YMAYADYNDLIELTETMLSGMVKELTGGYKIK 325



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ MLL  ++N++EV LFP
Sbjct: 487 ALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFP 522


>gi|94987469|ref|YP_595402.1| lysyl-tRNA synthetase (class II) [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731718|emb|CAJ55081.1| Lysyl-tRNA synthetase (class II) [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 457

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 126/309 (40%), Gaps = 33/309 (10%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60
           Y  +S  +L   D       +G +  +R  G +IF  I D  G  Q  A   N     F 
Sbjct: 6   YEAYSASELESLD--EIFACAGRIISLRSFGKVIFFHIMDRSGRIQCYASRENMGEEAFS 63

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGERE 119
             K      ++ ++G +              G++ L+   I +L+ +   LP    G   
Sbjct: 64  TFKKFDIGDIVGVNGKLFRTKM---------GELTLNCSTITLLAKSFRSLPEKHNGLTN 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGA- 177
               +R++ R++DL  +   ++I  KR++II+ +R  +    FIE  TPIL    P GA 
Sbjct: 115 I--ELRYRQRYIDLIVNPKTRDIFRKRSKIIHEIRAFLEENGFIEVETPIL-QPIPGGAM 171

Query: 178 -RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
            R F   +     + Y +  AP+ Y + L+  GF++ F++   FR+E       P EF  
Sbjct: 172 ARPFTTHNNAMDMTLY-MRIAPELYLKRLLVGGFEKLFELNRSFRNEGISIQHNP-EFTM 229

Query: 237 LDMEMSFVEQDDILNTMENVLR-------GVFEEFSNGNTVS---NNFLRICYDDAIRRY 286
            +   ++    D++   E +         G       GNT+      + +  + +++ + 
Sbjct: 230 CEFYWAYATYLDLMELTEEMFAYLTKKICGTMTISYQGNTIDFTPGTWQKYTFHESLEKI 289

Query: 287 GTDKPDLRN 295
           G   P+  N
Sbjct: 290 GGHSPEFYN 298



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 11/91 (12%)

Query: 485 VCNGFE--IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG---------LYRAFQCGM 533
           V + FE  IA   I N  SE+       +   ++V+E   G            RA + GM
Sbjct: 362 VTDRFELFIAGKEIANAFSELNDPIDQRLRFEEQVLEKARGDEEACPMDEDYLRALEYGM 421

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   GIDR+VMLL  + ++REV LFP+
Sbjct: 422 PPAAGEGIGIDRLVMLLTDSPSIREVILFPL 452


>gi|47458879|ref|YP_015741.1| lysyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|81614457|sp|Q6KIP6|SYK_MYCMO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|47458207|gb|AAT27530.1| lysyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 487

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 8/198 (4%)

Query: 91  TGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRI 148
           TG++ L A ++++LS + + LP    G  +  E  R+++R++DL   D + K  + R+RI
Sbjct: 119 TGELTLRANELKLLSKSLKVLPDKFHGLNDIEE--RYRHRYVDLIVNDDVRKTFLLRSRI 176

Query: 149 INSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I+ +R       ++E  TP+L        A+ F+        +FY L  A +   + L+ 
Sbjct: 177 ISLIRKYFDNLEYLEVDTPVLQPILGGASAKPFITKFNALNSNFY-LRIATELPLKKLVV 235

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            GFDR ++I   FR+E   +   P EF  ++   ++   + ++N  E++ + + +E  N 
Sbjct: 236 GGFDRVYEIGRIFRNEGVDTTHNP-EFTSIEYYEAYSNNEGMMNRTEDLFKFIAKEL-NL 293

Query: 268 NTVSNNFLRICYDDAIRR 285
            T+  N   I  +   RR
Sbjct: 294 KTIFFNGYEIDLNKPFRR 311



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 27/40 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG   GIDR+VML    +++REV LFP  +N
Sbjct: 447 ALEYGLPPTGGCGIGIDRLVMLFTNNESIREVLLFPHLKN 486


>gi|289757744|ref|ZP_06517122.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289713308|gb|EFD77320.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|326903255|gb|EGE50188.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis W-148]
          Length = 1172

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 23/230 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC- 58
           R  +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+   +  D  C 
Sbjct: 708 RPPSHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCA 767

Query: 59  --FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  A  +       ++      +++T   ++I     L  + +         PLP   
Sbjct: 768 ADFNAATDLGD----LVEMTGHMGASKTGTPSLIVSGWRLIGKCLR--------PLPNKW 815

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL      
Sbjct: 816 KGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGG 875

Query: 175 EGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AR F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 876 ATARPFV--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 923



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 41/214 (19%)

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----IAGDPLKFCSFAADARNHI 420
            E  +++G+ PV + ++   +EA+  R+D   G +        AG P +    A      +
Sbjct: 986  EPVDISGIWPV-RTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLEL 1044

Query: 421  AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             + L  + C   +  + +DFP             + +P T P     S +G       A 
Sbjct: 1045 YEHL--VECRTEQPTFYIDFPT------------SVSPLTRPH---RSKRG------VAE 1081

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +  
Sbjct: 1082 RWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAMEYA 1137

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1138 MPPTGGLGMGIDRVVMLITG-RSIRETLPFPLAK 1170


>gi|216264242|ref|ZP_03436234.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980715|gb|EEC21522.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 462

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 107/265 (40%), Gaps = 34/265 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF--EIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F  +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPEIYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +T       R +I   +        F   +TPI+T++  EGA +     RV+   F 
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMF---RVSTLKFN 182

Query: 193 ALPQAPQ-------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            L  AP                    Q      A    + +   P FR E+  + R   E
Sbjct: 183 KLNNAPSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASE 242

Query: 234 FYQLDMEMSFVEQDDILNTMENVLR 258
           F+ ++ EM+F + +D +   E++L+
Sbjct: 243 FWMIEPEMAFYKLNDNIALAEDLLK 267


>gi|332306229|ref|YP_004434080.1| asparaginyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173558|gb|AEE22812.1| asparaginyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 465

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 110/278 (39%), Gaps = 43/278 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G   VG  V + GWV R R          RD       +A  D +CF+  + +    +  
Sbjct: 12  GKYSVGQQVTVKGWV-RTR----------RDSKAGLSFIALHDGSCFDPIQVIALNTLNN 60

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
              +    ++ +I A  +  + +   Q +EI    E   + V G  E P++     +   
Sbjct: 61  YTDIQRLTTSCSIIATGVLKESQGQGQSLEI----EASEVEVVGWVENPDTYPMAPKRHS 116

Query: 133 LRRDTLHKNIVKRTRIINSM----RC------RMIAEN-FIECSTPILTASSPEGARDFL 181
           L     H ++  RT +I ++     C      R   EN +   STPILTAS  EGA +  
Sbjct: 117 LEYLREHAHLRPRTNVIGAVTRVRNCLSQAIHRFFHENGYCWVSTPILTASDTEGAGEMF 176

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLM-----------------ASGFDRYFQIAPCFRDED 224
             S ++  +  A  Q    + Q                    A+   + +   P FR E+
Sbjct: 177 RVSTLDMMNVPATEQGQVDFSQDFFGKETFLTVSGQLNGETYATAMSKIYTFGPTFRAEN 236

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             + R   EF+ ++ E++F +  DI    E++L+ VF+
Sbjct: 237 SNTSRHLAEFWMIEPEVAFADLSDIAQLSEDLLKYVFK 274



 Score = 37.4 bits (85), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V  +  + +G+++E         YR  +  G  PH G  
Sbjct: 380 DVLAPGIGEIIGGSQREERLDVFDRRLAEMGLNQEDY-----SWYRDLRRYGTVPHSGFG 434

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R+V  + G +NVR+V  FP +
Sbjct: 435 LGFERLVAYVTGMQNVRDVIAFPRT 459


>gi|121637548|ref|YP_977771.1| lysyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224990023|ref|YP_002644710.1| lysyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|296439664|sp|A1KJ57|LYSX_MYCBP RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|296439665|sp|C1ANR3|LYSX_MYCBT RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|121493195|emb|CAL71666.1| Possible lysyl-tRNA synthetase 2 lysX [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224773136|dbj|BAH25942.1| lysyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
          Length = 1172

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 23/230 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC- 58
           R  +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+   +  D  C 
Sbjct: 708 RPPSHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCA 767

Query: 59  --FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  A  +       ++      +++T   ++I     L  + +         PLP   
Sbjct: 768 AEFNAATDLGD----LVEMTGHMGASKTGTPSLIVSGWRLIGKCLR--------PLPNKW 815

Query: 117 EREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL  +   +  I  R+ ++ ++R  + A+ F+E  TPIL      
Sbjct: 816 KGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGG 875

Query: 175 EGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AR F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 876 ATARPFV--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 923



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 41/214 (19%)

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----IAGDPLKFCSFAADARNHI 420
            E  +++G+ PV + ++   +EA+  R+D   G +        AG P +    A      +
Sbjct: 986  EPVDISGIWPV-RTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLEL 1044

Query: 421  AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             + L  + C   +  + +DFP             + +P T P     S +G       A 
Sbjct: 1045 YEHL--VECRTEQPTFYIDFPT------------SVSPLTRPH---RSKRG------VAE 1081

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +  
Sbjct: 1082 RWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAMEYA 1137

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1138 MPPTGGLGMGIDRVVMLITG-RSIRETLPFPLAK 1170


>gi|38567283|emb|CAE76572.1| related to lysyl-tRNA synthetase (lysine--tRNA ligase) [Neurospora
           crassa]
          Length = 594

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 28/254 (11%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFE---------IAKSVRSEWV 70
           V + G V  VR  G  ++FLD++  +   Q + N +              +AK +    +
Sbjct: 74  VIIHGRVQSVRRAGNKLMFLDLKGEFEHVQGLCNFNKLQVTGVELGEFKALAKLLNRGDI 133

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I G    R+ +T      TG++ + A ++  L      PLP   E E    +R ++R 
Sbjct: 134 VSITG----RATKTP-----TGELSIEATRLPELLTPALAPLPFKLEDE---EVRIQHRH 181

Query: 131 LDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV-PSRV 186
           +D+   R T+   +  R+ +I  +R       F+E  TPIL   +S   AR F V  S  
Sbjct: 182 IDMLVNRKTI-DTLRLRSHLIKYLRDFFHERGFLEFQTPILAENASGATARPFTVTASET 240

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           +     A+  AP+ + + L+  G D+ F++ P FR+E       P EF   +   ++   
Sbjct: 241 SVNKNLAMRIAPELWLKRLVVGGVDKVFELGPAFRNEGIDQTHNP-EFSMCEFYNAYANL 299

Query: 247 DDILNTMENVLRGV 260
           DD++   E ++ G 
Sbjct: 300 DDLITLTEELICGA 313


>gi|289753728|ref|ZP_06513106.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289694315|gb|EFD61744.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
          Length = 1172

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 23/230 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC- 58
           R  +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+   +  D  C 
Sbjct: 708 RPPSHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCA 767

Query: 59  --FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  A  +       ++      +++T   ++I     L  + +         PLP   
Sbjct: 768 ADFNAATDLGD----LVEMTGHMGASKTGTPSLIVSGWRLIGKCLR--------PLPNKW 815

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL      
Sbjct: 816 KGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGG 875

Query: 175 EGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AR F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 876 ATARPFV--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 923



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 41/214 (19%)

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----IAGDPLKFCSFAADARNHI 420
            E  +++G+ PV + ++   +EA+  R+D   G +        AG P +    A      +
Sbjct: 986  EPVDISGIWPV-RTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLEL 1044

Query: 421  AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             + L  + C   +  + +DFP             + +P T P     S +G       A 
Sbjct: 1045 YEHL--VECRTEQPTFYIDFPT------------SVSPLTRPH---RSKRG------VAE 1081

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +  
Sbjct: 1082 RWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAMEYA 1137

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1138 MPPTGGLGMGIDRVVMLITG-RSIRETLPFPLAK 1170


>gi|119192776|ref|XP_001246994.1| asparaginyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
          Length = 578

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 106/244 (43%), Gaps = 13/244 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VHR+R    +IF+ + D YG  Q V   D      A ++  E  + + G +
Sbjct: 153 GTRVRVLGRVHRLRSQKDVIFVTLSDGYGFLQCVFTGDLVKTYDAMTLTLETSIAVHGEM 212

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLDL 133
            +   +    +      EL A    ++  A    E +   V  + + P+++ +  R L L
Sbjct: 213 CAVPPKQHAPD----NRELHADFFTVIGRAAGDKEAITTRVAPDAD-PQTL-YDNRHLVL 266

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +     +  R  +I + R     +  +E + P +  +  EG           + ++  
Sbjct: 267 RGEIASSVMKVRAAVIRAFRSAFEEQRMLEVTPPAMVQTQVEGGSTLFSFDYYGEPAY-- 324

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  + S  D  F I P FR E   + R   E+  ++ E+ F+  DD+L+ +
Sbjct: 325 LTQSSQLYLETCLPSLGD-VFCICPSFRAEKSLTRRHLSEYTHIEAELDFITFDDLLDHL 383

Query: 254 ENVL 257
           E ++
Sbjct: 384 EVII 387


>gi|330996051|ref|ZP_08319945.1| asparagine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329574048|gb|EGG55626.1| asparagine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 467

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 40/272 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEW 69
           L   D GS V + GWV   R    + F+ + D   I   Q+VA+ D    E+ K      
Sbjct: 13  LKREDYGSEVNVKGWVRTRRGSKSVHFIALNDGSTINNVQIVADADKFDDELIK------ 66

Query: 70  VLCIDGLVMSRSAETINANIITGQ-IELSAQKIEIL-SVAEELPLPVFGER-EYPESIRF 126
            L   G  +S + E + + + +GQ +E+ A++IE+L +   + P+   G+  EY  +   
Sbjct: 67  -LITTGACLSVTGELVQS-VGSGQAVEIRAREIEVLGTCGSDYPMQKKGQSMEYMRT--- 121

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            +  + LR +T       R  +  ++        F    TPI+TAS  EGA       +V
Sbjct: 122 -HAHMRLRTNTFGAVFRIRHNMAMAVHRYFHEHGFFYFHTPIITASDCEGAGQMF---QV 177

Query: 187 NQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPR 226
              + Y L +  +                    Q +  L A+     +   P FR E+  
Sbjct: 178 TTKNLYDLKKDDEGKIDYSDDFFGKTTSLTVSGQLEGELGATALGAIYTFGPTFRAENSN 237

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + R   EF+ ++ E++F +  D ++  E+ ++
Sbjct: 238 TPRHLAEFWMIEPEVAFNDIHDNMDLAEDFIK 269


>gi|289443094|ref|ZP_06432838.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis T46]
 gi|289569687|ref|ZP_06449914.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis T17]
 gi|289416013|gb|EFD13253.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis T46]
 gi|289543441|gb|EFD47089.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis T17]
          Length = 1172

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 23/230 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC- 58
           R  +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+   +  D  C 
Sbjct: 708 RPPSHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCA 767

Query: 59  --FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  A  +       ++      +++T   ++I     L  + +         PLP   
Sbjct: 768 ADFNAATDLGD----LVEMTGHMGASKTGTPSLIVSGWRLIGKCLR--------PLPNKW 815

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL      
Sbjct: 816 KGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGG 875

Query: 175 EGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AR F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 876 ATARPFV--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 923



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 41/214 (19%)

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----IAGDPLKFCSFAADARNHI 420
            E  +++G+ PV + ++   +EA+  R+D   G +        AG P +    A      +
Sbjct: 986  EPVDISGIWPV-RTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLEL 1044

Query: 421  AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             + L  + C   +  + +DFP             + +P T P     S +G       A 
Sbjct: 1045 YEHL--VECRTEQPTFYIDFPT------------SVSPLTRPH---RSKRG------VAE 1081

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +  
Sbjct: 1082 RWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAMEYA 1137

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1138 MPPTGGLGMGIDRVVMLITG-RSIRETLPFPLAK 1170


>gi|226941342|ref|YP_002796416.1| lysyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|254782474|sp|C1DB68|SYK_LARHH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226716269|gb|ACO75407.1| Syk [Laribacter hongkongensis HLHK9]
          Length = 503

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/322 (22%), Positives = 130/322 (40%), Gaps = 42/322 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V ++G +   R  G   F  ++D  G  Q   + D    ++    ++ W    +L   G 
Sbjct: 68  VVVAGRMMLKRVMGKASFATVQDSSGRIQFYISRDKVGEDVYADFKT-WDMGDILGAKGT 126

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--- 133
           +M            TG++ +   ++ +LS +   PLP        +  +++ R++DL   
Sbjct: 127 LMKTK---------TGELSVEVSELRLLSKSLR-PLPDKFHGLADQEQKYRQRYVDLIIN 176

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
              RDT     +KR++I+ ++R  M+ E+++E  TP++        A+ F+         
Sbjct: 177 QDSRDTF----IKRSKIVQTVREVMVGEDYLEVETPMMHPIPGGAAAKPFVTHHNALDMP 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  G +R F+I   FR+E   S R   EF  ++   ++   + ++
Sbjct: 233 LY-LRIAPELYLKRLVVGGLERVFEINRNFRNEG-MSTRHNPEFTMIEFYEAYCGYERMM 290

Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPDLRNPIIMHN 301
              E ++R   E       V+ N         F R     AI+ Y     D         
Sbjct: 291 EMTEKIIRRCAEAACGTTKVTYNGKEVDLGKPFDRFTIVGAIKHYNPQYTD------EQL 344

Query: 302 VTEHFVHSEFRVFSKILSVNPG 323
             E ++ SE +     L   PG
Sbjct: 345 ADEAWLKSEIKALGGKLPPAPG 366



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  A ++R+V LFP
Sbjct: 462 RAMEYGLPPTGGCGIGIDRLVMLLTDAPSIRDVILFP 498


>gi|187917979|ref|YP_001883542.1| asparaginyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|119860827|gb|AAX16622.1| asparaginyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 461

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/307 (20%), Positives = 118/307 (38%), Gaps = 44/307 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCID 74
           + + + + GW+   R +G I F++I D   I   Q V + +   FE     + E+     
Sbjct: 14  LDTMITVKGWIRTKRSNGKISFVEINDGSNIKGIQAVIDEEDPQFE-----KQEFKKLTT 68

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G  +S +   I +       E+   K  ++  A++    +  +R   E +R +   L +R
Sbjct: 69  GASISLTGILILSPAKGQAYEIKTTKFNVIGEADQETYLLQKKRHTFEFLR-EIPHLRIR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN------- 187
            +T       R +I   +        F    TPI+T++  EGA +    S ++       
Sbjct: 128 TNTFGAVARIRNQISYKIHEYFQKNGFFYIHTPIITSNDGEGAGEIFRVSTLDLNNIAKG 187

Query: 188 -----QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                +  F+   A      Q      A    + +   P FR E+  + R   EF+ ++ 
Sbjct: 188 QEIDFKNDFFGKQAFLTVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWMIEP 247

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSNNFLRIC 278
           EM+F   +D +N  E+ L+ +  E  N                      + +++NF  I 
Sbjct: 248 EMAFFTLEDNINLAEDFLKYILRETLNHCGQDMEFFDNFIEKGLIKKIEDVINSNFEVIT 307

Query: 279 YDDAIRR 285
           Y  AI++
Sbjct: 308 YTQAIKK 314


>gi|164428694|ref|XP_964757.2| hypothetical protein NCU00931 [Neurospora crassa OR74A]
 gi|157072244|gb|EAA35521.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 543

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 28/254 (11%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFE---------IAKSVRSEWV 70
           V + G V  VR  G  ++FLD++  +   Q + N +              +AK +    +
Sbjct: 23  VIIHGRVQSVRRAGNKLMFLDLKGEFEHVQGLCNFNKLQVTGVELGEFKALAKLLNRGDI 82

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I G    R+ +T      TG++ + A ++  L      PLP   E E    +R ++R 
Sbjct: 83  VSITG----RATKTP-----TGELSIEATRLPELLTPALAPLPFKLEDE---EVRIQHRH 130

Query: 131 LDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV-PSRV 186
           +D+   R T+   +  R+ +I  +R       F+E  TPIL   +S   AR F V  S  
Sbjct: 131 IDMLVNRKTI-DTLRLRSHLIKYLRDFFHERGFLEFQTPILAENASGATARPFTVTASET 189

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           +     A+  AP+ + + L+  G D+ F++ P FR+E       P EF   +   ++   
Sbjct: 190 SVNKNLAMRIAPELWLKRLVVGGVDKVFELGPAFRNEGIDQTHNP-EFSMCEFYNAYANL 248

Query: 247 DDILNTMENVLRGV 260
           DD++   E ++ G 
Sbjct: 249 DDLITLTEELICGA 262


>gi|253799320|ref|YP_003032321.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis KZN 1435]
 gi|254364489|ref|ZP_04980535.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis str.
           Haarlem]
 gi|289554585|ref|ZP_06443795.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis KZN 605]
 gi|289745922|ref|ZP_06505300.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|308231895|ref|ZP_07414164.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu001]
 gi|308370781|ref|ZP_07422693.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu003]
 gi|308372017|ref|ZP_07427062.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu004]
 gi|308376778|ref|ZP_07440004.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu008]
 gi|308377785|ref|ZP_07480396.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu009]
 gi|308378997|ref|ZP_07484594.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu010]
 gi|308380136|ref|ZP_07488819.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu011]
 gi|296439671|sp|C6DS31|LYSX_MYCTK RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|134150003|gb|EBA42048.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis str.
           Haarlem]
 gi|253320823|gb|ACT25426.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis KZN 1435]
 gi|289439217|gb|EFD21710.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis KZN 605]
 gi|289686450|gb|EFD53938.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|308215742|gb|EFO75141.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu001]
 gi|308330919|gb|EFP19770.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu003]
 gi|308334689|gb|EFP23540.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu004]
 gi|308350027|gb|EFP38878.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu008]
 gi|308354664|gb|EFP43515.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu009]
 gi|308358620|gb|EFP47471.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu010]
 gi|308362546|gb|EFP51397.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu011]
 gi|328459071|gb|AEB04494.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis KZN 4207]
          Length = 1174

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 23/230 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC- 58
           R  +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+   +  D  C 
Sbjct: 710 RPPSHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCA 769

Query: 59  --FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  A  +       ++      +++T   ++I     L  + +         PLP   
Sbjct: 770 ADFNAATDLGD----LVEMTGHMGASKTGTPSLIVSGWRLIGKCLR--------PLPNKW 817

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL      
Sbjct: 818 KGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGG 877

Query: 175 EGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AR F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 878 ATARPFV--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 925



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 41/214 (19%)

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----IAGDPLKFCSFAADARNHI 420
            E  +++G+ PV + ++   +EA+  R+D   G +        AG P +    A      +
Sbjct: 988  EPVDISGIWPV-RTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLEL 1046

Query: 421  AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             + L  + C   +  + +DFP             + +P T P     S +G       A 
Sbjct: 1047 YEHL--VECRTEQPTFYIDFPT------------SVSPLTRPH---RSKRG------VAE 1083

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +  
Sbjct: 1084 RWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAMEYA 1139

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1140 MPPTGGLGMGIDRVVMLITG-RSIRETLPFPLAK 1172


>gi|118471596|ref|YP_890315.1| lysyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118172883|gb|ABK73779.1| lysyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 507

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 122/271 (45%), Gaps = 22/271 (8%)

Query: 5   RTHSCGDL--------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPD 55
           RTH+  +L          +  G  V +SG V   R  G + F  +++  G   QV+ +  
Sbjct: 44  RTHTLAELRRAHPDLAADTATGQIVGVSGRVVFARNSGKLCFATLQEGDGTQLQVMIS-- 101

Query: 56  SACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
               ++ +     W   +D G ++    E I++    G++ + A + ++ + A   PLPV
Sbjct: 102 --LAQVGQEALDSWKSDVDLGDIVFVHGEVISSK--RGELSVLADRWQMAAKALR-PLPV 156

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
              +E  E  R + R++DL      + I + R  ++ ++R  +    F+E  TP+L T +
Sbjct: 157 -AHKEMSEEARVRQRYVDLIVRPEARTIARQRVAVVRAVRSALERRGFLEVETPMLQTLA 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+  S       Y L  AP+ + +  +  GF++ F++   FR+E   S   P 
Sbjct: 216 GGAAARPFITHSNALDIDLY-LRIAPELFLKRCLVGGFEKVFELNRNFRNEGVDSTHSP- 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           EF  L+   ++ + +D       +++ V +E
Sbjct: 274 EFAMLETYQAYGDYNDSATVTRELIQEVADE 304


>gi|301308376|ref|ZP_07214330.1| asparagine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300833846|gb|EFK64462.1| asparagine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 468

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 110/271 (40%), Gaps = 34/271 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L     G+ V + GWV   R    + F+ + D   I   Q+V + D    E  
Sbjct: 6   RTKIVDVLKSDAFGTTVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDVDKLGDEFL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K + +   + ++G++     +  N       +E+ A +IEI   A+    P+   ++   
Sbjct: 66  KPITTGASISVNGILTQSQGKGQN-------VEIQATEIEIFGTADPATYPL---QKKGH 115

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGA-RD 179
           S+ F      LR  T     V R R  +  ++        F    TPI+TAS  EGA + 
Sbjct: 116 SMEFLREIAHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQM 175

Query: 180 FLVPSR-------------VNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDE 223
           F V ++             + +  F+    +     QL   L A+   + +   P FR E
Sbjct: 176 FQVTTKNLYDLKKDENGSIIYEDDFFGKQASLTVSGQLEGELAATALGQIYTFGPTFRAE 235

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           +  + R   EF+ ++ E++F   +DI + ME
Sbjct: 236 NSNTPRHLAEFWMIEPEVAF---NDITDNME 263


>gi|150006819|ref|YP_001301562.1| lysyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|166229813|sp|A6L8C6|SYK_PARD8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|149935243|gb|ABR41940.1| lysyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 576

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 29/286 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK---SVRSEWVLCIDGLV 77
           V ++G +   R  G   F++++D  G  QV  + D  C +  K   +V  + +L I   V
Sbjct: 55  VSIAGRIMSRRIMGKASFMELQDSEGRIQVYISRDDICPDENKDTYNVVFKKLLDIGDFV 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYR 129
                +        G+I + AQ++ +LS +   PLPV   ++         PE +R++ R
Sbjct: 115 ---GIKGFVFRTQMGEISVHAQELTVLSKSLR-PLPVVKYKDGVAYDGFNDPE-LRYRQR 169

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL  +   K+I +KR  II +MR  +    + E  TPIL + +    AR F+      
Sbjct: 170 YVDLVVNEGVKDIFMKRAAIIKTMRTALDEAGYTEVETPILQSIAGGASARPFITHHNSL 229

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + +
Sbjct: 230 DIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMELYVQYKDYN 287

Query: 248 DILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
            +++  E +L        G  E   +G T+S    F R+   +AI+
Sbjct: 288 WMMSFTEKLLERICIAVNGTSESTIDGKTISFKAPFRRLPILEAIK 333



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP
Sbjct: 460 RALQFGMPPTSGIGIGIDRLVMLMTGQTTIQEVLLFP 496


>gi|31792827|ref|NP_855320.1| lysyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|78099175|sp|Q7VEV7|LYSX_MYCBO RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|31618417|emb|CAD96335.1| Possible lysyl-tRNA synthetase 2 lysX [Mycobacterium bovis
           AF2122/97]
          Length = 1172

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 23/230 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC- 58
           R  +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+   +  D  C 
Sbjct: 708 RPPSHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCA 767

Query: 59  --FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  A  +       ++      +++T   ++I     L  + +         PLP   
Sbjct: 768 ADFNAATDLGD----LVEMTGHMGASKTGTPSLIVSGWRLIGKCLR--------PLPNKW 815

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL      
Sbjct: 816 KGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGG 875

Query: 175 EGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AR F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 876 ATARPFV--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 923



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 41/214 (19%)

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----IAGDPLKFCSFAADARNHI 420
            E  +++G+ PV + ++   +EA+  R+D   G +        AG P +    A      +
Sbjct: 986  EPVDISGIWPV-RTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLEL 1044

Query: 421  AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             + L  + C   +  + +DFP             + +P T P     S +G       A 
Sbjct: 1045 YEHL--VECRTEQPTFYIDFPT------------SVSPLTRPH---RSKRG------VAE 1081

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +  
Sbjct: 1082 RWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAMEYA 1137

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1138 MPPTGGLGMGIDRVVMLITG-RSIRETLPFPLAK 1170


>gi|270292827|ref|ZP_06199038.1| lysine--tRNA ligase [Streptococcus sp. M143]
 gi|270278806|gb|EFA24652.1| lysine--tRNA ligase [Streptococcus sp. M143]
          Length = 496

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    D      +EI K       L ++G VM 
Sbjct: 65  IAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFKKADLGDFLGVEGEVMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A  I  LS A   PLP  F      E+I ++ R+LDL   R+
Sbjct: 125 TD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKRYLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     Q     L  
Sbjct: 174 SFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQDIMDLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|110637161|ref|YP_677368.1| lysyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|110279842|gb|ABG58028.1| lysine--tRNA ligase [Cytophaga hutchinsonii ATCC 33406]
          Length = 575

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 113/257 (43%), Gaps = 23/257 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + ++G V   R  G   F++I+D  G  Q     D  C       ++++      LV   
Sbjct: 53  ISIAGRVMSRRIMGNASFVEIQDASGRIQAYFRRDDLC---PDEDKTQYNTVFKKLVGIG 109

Query: 81  SAETINANIIT---GQIELSAQKIEILSVA-EELPLP-----------VFGEREYPESIR 125
               I   + T   G+I +     +IL+ A   LP+P           +F     PE  R
Sbjct: 110 DIIGIYGYVFTTQTGEITIHVTSFKILTKALRPLPMPKEAVDENGEKKIFDAFTDPEQ-R 168

Query: 126 FKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
           ++ R++DL  +  +    +KRTR++N+MR  +  + ++E  TPIL        AR F   
Sbjct: 169 YRMRYVDLIVNPHVRDAFIKRTRLVNTMREYLNNKGYLEVETPILQPLYGGAAARPFKTH 228

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  A + Y + L+  GFD  ++ +  FR+E       P EF Q+++ +++
Sbjct: 229 HNTLDMPLY-LRIANELYLKRLIVGGFDGVYEFSKDFRNEGMSRFHNP-EFTQVELYVAY 286

Query: 244 VEQDDILNTMENVLRGV 260
            +   +++ +E ++  V
Sbjct: 287 KDYYWMMDLVEEMVEKV 303



 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 12/91 (13%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++ +CNG EI +           R    E +       G S+ +V +      RA + G
Sbjct: 413 RFEAICNGKEICNSFSELNDPIDQRQRFEEQL--ELGKRGDSESMVLDE--DFLRALEYG 468

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP  G+  GIDR+ M++  + ++++V  FP
Sbjct: 469 MPPTAGLGIGIDRLAMVMTNSASIQDVLFFP 499


>gi|293365298|ref|ZP_06612015.1| lysine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307703838|ref|ZP_07640779.1| lysyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291316748|gb|EFE57184.1| lysine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307622673|gb|EFO01669.1| lysyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 496

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    D      +EI K       L ++G VM 
Sbjct: 65  IAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFKKADLGDFLGVEGEVMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A  I  LS A   PLP  F      E+I ++ R+LDL   R+
Sbjct: 125 TD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKRYLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     Q     L  
Sbjct: 174 SFER-FVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQDIMDLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|190344391|gb|EDK36059.2| hypothetical protein PGUG_00157 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 544

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 69/134 (51%), Gaps = 5/134 (3%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRV---NQGSFYALP 195
           +++V R+ +I ++R   +   F+E  TP+L  + +   A+ F   SR    ++    +L 
Sbjct: 201 EHMVIRSLVIQAIRSFFLQRQFLEVQTPLLAGNGTGANAQPFKTASRALGSSEEESLSLR 260

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ + + L+ SGFD+ F+I P FR+E   +   P EFY  +   SF+  ++++   ++
Sbjct: 261 VAPELWLKRLVISGFDKVFEIGPSFRNEGVDATHNP-EFYTCEFYQSFLSLEELMEITQD 319

Query: 256 VLRGVFEEFSNGNT 269
           +   +    S   T
Sbjct: 320 LFAHIHSSLSTHRT 333



 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           R  + G+PP GG   GIDR+VML  GA  + +V  F
Sbjct: 500 RVMEYGLPPTGGWGCGIDRLVMLFSGASRISQVLPF 535


>gi|152992078|ref|YP_001357799.1| lysyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151423939|dbj|BAF71442.1| lysyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 547

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 114/259 (44%), Gaps = 9/259 (3%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            D G  V L+G +  +R  G   F  I D  G+ Q+  N D        +V ++ +  + 
Sbjct: 55  KDEGQTVTLTGRIKFIRIMGKAAFAKIEDTDGLVQIYYNRDDLPEGYYNTV-AKKLFEVG 113

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            ++ +     +     TG++ L  + ++I+S A  +PLP          IR++ R+LD+ 
Sbjct: 114 DIIEATGYPFVTQ---TGELTLHCKDLKIVSKAI-MPLPEKFHGLTDHEIRYRQRYLDMI 169

Query: 135 RD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFY 192
            +  + +  + R++I++ +R      +F+E  TP++    P GA      +  N  G   
Sbjct: 170 MNPEVKETFIMRSKIVSLIRRFFEDHSFLEVETPMM-HPIPGGANAKPFVTHHNALGVDR 228

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L   G +  F+I   FR+E       P EF  ++   ++    D++  
Sbjct: 229 YLRIAPELYLKRLTVGGMEAVFEINRNFRNEGMDQTHNP-EFTSIEFYWAYHNYLDLMRL 287

Query: 253 MENVLRGVFEEFSNGNTVS 271
            E +   +F +     T++
Sbjct: 288 TEELFEYIFAQLQMDKTIT 306



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 5/90 (5%)

Query: 479 AFQYDLVCNGFEIASGGIR-----NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           A +++L   G EIA+G        +       QA +      E   +      RA   GM
Sbjct: 404 AERFELFMAGKEIANGFNELNDPIDQFERFKAQADAKEATGDEETMHMDLDFIRALGHGM 463

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            P  G   GIDR+VM+L    ++R+V LFP
Sbjct: 464 TPTAGEGIGIDRLVMMLTDNHSIRDVILFP 493


>gi|125544665|gb|EAY90804.1| hypothetical protein OsI_12406 [Oryza sativa Indica Group]
          Length = 630

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 77/152 (50%), Gaps = 4/152 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R+LDL  +   ++I K R+++++ +R  +   +F+E  TP++   +    AR 
Sbjct: 250 QETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDGLDFLEVETPMMNMIAGGAAARP 309

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  AP+ Y + L+  G DR ++I   FR+E       P EF   + 
Sbjct: 310 FVTHHNELNMRLY-MRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTTCEF 367

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
            M++ + +D++   E +L G+ +E + G  + 
Sbjct: 368 YMAYADYNDLMKLTETMLSGMVKELTGGYKIK 399


>gi|1004327|emb|CAA62491.1| asparaginyl-tRNA synthetase [Thermus thermophilus]
          Length = 438

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 108/247 (43%), Gaps = 28/247 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V L GW+++ R  G I FL +RD  G  Q   V      A F  A  +  E  L + G V
Sbjct: 16  VELRGWLYQRRSKGKIHFLILRDGTGFLQATVVQGEVPEAVFREADHLPQETALRVWGRV 75

Query: 78  MS-RSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRR 135
              R A         G  EL+ + ++++S  + E P+   G +E+       +R L LR 
Sbjct: 76  REDRRA--------PGGFELAVRDLQVVSRPQGEYPI---GPKEHGIDFLMDHRHLWLR- 123

Query: 136 DTLHKNIVKRTRIINSMRCRMIAE-----NFIECSTPILTASSPEGARDFLVPSRVNQGS 190
              H+      RI + +  R I E      F+    PILT S+ EG  + L    +  G 
Sbjct: 124 ---HRRPFAVMRIRDELE-RAIHEFFGERGFLRFDAPILTPSAVEGTTE-LFEVELFDGE 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L Q+ Q Y +   A  F + +   P FR E  ++ R   EF+ ++ E++F+  ++ +
Sbjct: 179 KAYLSQSGQLYAE-AGALAFAKVYTFGPTFRAERSKTRRHLLEFWMVEPEVAFMTHEENM 237

Query: 251 NTMENVL 257
              E ++
Sbjct: 238 ALQEELV 244


>gi|41406557|ref|NP_959393.1| lysyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
           K-10]
 gi|41394906|gb|AAS02776.1| LysS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 499

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 17/257 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEW 69
           D    DV   V ++G V   R  G + F  +++  G T QV+ + D    ++ +     W
Sbjct: 54  DTATDDV---VGVAGRVIFARNSGKLCFATLQEGDGTTLQVMVSLD----KVGREALDAW 106

Query: 70  VLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
              +D G ++S     I++    G++ + A    + S +   PLPV   +E  E  R + 
Sbjct: 107 KADVDLGDIVSVHGTVISSR--RGELSVLADSWRMASKSLR-PLPV-AHKEMSEEARVRQ 162

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRV 186
           R++DL      + + + R  +I ++R  +    F+E  TP+L T +    AR F+  S  
Sbjct: 163 RYVDLIVRPQARTVARQRIAVIRAIRNALERRGFLEVETPMLQTLAGGAAARPFVTHSNA 222

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  AP+ + +  +  GFD+ F++   FR+E   S   P EF  L+   ++   
Sbjct: 223 LDIDLY-LRIAPELFLKRCVVGGFDKVFELNRVFRNEGADSTHSP-EFSMLETYQAYGTY 280

Query: 247 DDILNTMENVLRGVFEE 263
           DD       +++ V +E
Sbjct: 281 DDSAVVTRELIQEVADE 297


>gi|15608778|ref|NP_216156.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|148661436|ref|YP_001282959.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148822848|ref|YP_001287602.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|254231841|ref|ZP_04925168.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis C]
 gi|260204909|ref|ZP_05772400.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289574309|ref|ZP_06454536.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis K85]
 gi|289761791|ref|ZP_06521169.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis GM 1503]
 gi|297731180|ref|ZP_06960298.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298525138|ref|ZP_07012547.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis 94_M4241A]
 gi|308375634|ref|ZP_07444586.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu007]
 gi|11387190|sp|P94974|LYSX_MYCTU RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|296439669|sp|A5U2Z7|LYSX_MYCTA RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|296439670|sp|A5WMW1|LYSX_MYCTF RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|1838991|emb|CAB06635.1| Possible lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis
           H37Rv]
 gi|124600900|gb|EAY59910.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis C]
 gi|148505588|gb|ABQ73397.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148721375|gb|ABR06000.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis F11]
 gi|289538740|gb|EFD43318.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis K85]
 gi|289709297|gb|EFD73313.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis GM 1503]
 gi|298494932|gb|EFI30226.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis 94_M4241A]
 gi|308345727|gb|EFP34578.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu007]
          Length = 1172

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 23/230 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC- 58
           R  +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+   +  D  C 
Sbjct: 708 RPPSHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCA 767

Query: 59  --FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  A  +       ++      +++T   ++I     L  + +         PLP   
Sbjct: 768 ADFNAATDLGD----LVEMTGHMGASKTGTPSLIVSGWRLIGKCLR--------PLPNKW 815

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL      
Sbjct: 816 KGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGG 875

Query: 175 EGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AR F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 876 ATARPFV--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 923



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 41/214 (19%)

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----IAGDPLKFCSFAADARNHI 420
            E  +++G+ PV + ++   +EA+  R+D   G +        AG P +    A      +
Sbjct: 986  EPVDISGIWPV-RTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLEL 1044

Query: 421  AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             + L  + C   +  + +DFP             + +P T P     S +G       A 
Sbjct: 1045 YEHL--VECRTEQPTFYIDFPT------------SVSPLTRPH---RSKRG------VAE 1081

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +  
Sbjct: 1082 RWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAMEYA 1137

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1138 MPPTGGLGMGIDRVVMLITG-RSIRETLPFPLAK 1170


>gi|300727005|ref|ZP_07060425.1| lysine--tRNA ligase [Prevotella bryantii B14]
 gi|299775728|gb|EFI72318.1| lysine--tRNA ligase [Prevotella bryantii B14]
          Length = 576

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 117/259 (45%), Gaps = 32/259 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---------L 71
           V ++G +   R  G   F++++D  G  QV    D  C    K + ++           +
Sbjct: 54  VIIAGRMMSRRVMGKASFVELQDSEGRIQVYVTRDDICPGEDKDLYNKVFKKLLDIGDFI 113

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I G V             TG+I + AQ+I +LS + + PLP+        + + + PE 
Sbjct: 114 GIKGFVFKTQ---------TGEISVHAQEITLLSKSLK-PLPIVKYKDGVAYDKFDDPE- 162

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           +R + R++DL   D +    +KR  ++ +MR    A+ + E  TPIL + +    AR F+
Sbjct: 163 MRARQRYVDLVVNDGVKDTFLKRAVVLRTMRAFFDAQGYTEVETPILQSIAGGASARPFI 222

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y +  A + Y + L+  GFD  ++I   FR+E    +  P EF  +++ +
Sbjct: 223 THFNALNIDMY-MRIATELYLKRLIVGGFDGVYEIGKNFRNEGMDKNHNP-EFTCMELYV 280

Query: 242 SFVEQDDILNTMENVLRGV 260
            + + + +++  E +L  +
Sbjct: 281 PYKDYNWMMSFTEKLLETI 299



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 5/63 (7%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           RA Q GMPP  GI  GIDR+ ML+ G + ++EV LFP  +    +    P + S+++  E
Sbjct: 460 RALQYGMPPTSGIGIGIDRLTMLMTGKEYIQEVMLFPQMKPEAKI----PQS-SIKEWAE 514

Query: 587 LGL 589
           LG+
Sbjct: 515 LGV 517


>gi|311747795|ref|ZP_07721580.1| lysine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126575786|gb|EAZ80096.1| lysine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 568

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 122/287 (42%), Gaps = 24/287 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + ++G +   R  G   F +I+D  G  Q+    D  C E  K++ +     + G+    
Sbjct: 54  ISIAGRLMSRRIMGSASFAEIQDSTGRLQIYVRRDDICTEEDKTLYNTVFKKLLGIGDFI 113

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---------PESIRFKYRFL 131
             +       TG+I L   ++ +LS + + PLPV    E          PE +R++ R++
Sbjct: 114 GVKGYIFTTQTGEISLHVTELTLLSKSVK-PLPVVKRDEDGNVHDGFTDPE-LRYRQRYV 171

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +   K   K R++II++MR       ++E  TPIL A      AR F         
Sbjct: 172 DLTVNPEVKATFKTRSKIISTMRRYFDDHGWLEVETPILQAVHGGAAARPFATHHNTLDM 231

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             + L  A + Y + L+  GFD  ++    FR+E       P EF  +++ +++ +   +
Sbjct: 232 PLF-LRIANELYLKRLIVGGFDGVYEFGKMFRNEGMDRTHNP-EFTSMEIYVAYKDYVWM 289

Query: 250 LNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
           +  +E ++  V E       +         +  + R+   D+I+ Y 
Sbjct: 290 MEMVEELIEQVTESIHGKTKIKVGANEIEFAGPYRRLTMYDSIKEYA 336



 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 23/37 (62%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  GIDR+ MLL     ++EV  FP
Sbjct: 460 RALEYGMPPTSGLGIGIDRLTMLLTNKTTIQEVLFFP 496


>gi|148377568|ref|YP_001256444.1| asparaginyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291614|emb|CAL59000.1| Asparaginyl tRNA synthetase [Mycoplasma agalactiae PG2]
          Length = 452

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 28/276 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIAKSVRSEWVLCIDG-LV 77
           V L GWV   R +  I FL I D   +  + A    D   F++   VR    + + G +V
Sbjct: 21  VVLRGWVVSNRGNNKIRFLTISDGSTVENIQATLKGDEFDFKLLDEVRIGAAVQVYGKIV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           ++  A+          +E+ A K  +L   +    P+  +    E++R       LR  T
Sbjct: 81  LTPKAKQ--------PLEILASKFVLLKNVDH-DFPIQKQEINLETLR---EIPHLRHRT 128

Query: 138 LHKNIVKRTRIINSMRC----RMIAEN-FIECSTPILTASSPEGA-RDFLVPSRVNQGSF 191
              N+++   +I S       +  AEN F+  S PI+T++  EGA   F V     +  F
Sbjct: 129 ---NLLRCVMLIRSTLALEIHKFFAENGFLNFSAPIITSNDGEGAGEQFYVNDGNKEQPF 185

Query: 192 YALPQAPQQYKQLLMAS----GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           +    A       L A     GF+R +  AP FR E   + +   EF+ ++ E++F +  
Sbjct: 186 FGNNNATLGVTGQLHAESYAIGFERVYTFAPTFRAEHSNTKKHAAEFWMIEPEVAFYDLK 245

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
            I+N    +L+ V +   N +     +L+   D ++
Sbjct: 246 KIINLANKLLKNVIKNTINKHPREFEYLQNNVDSSL 281


>gi|124003298|ref|ZP_01688148.1| lysyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123991396|gb|EAY30827.1| lysyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 582

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 117/263 (44%), Gaps = 39/263 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---------VL 71
           V ++G +   R  G   F +++D  G  Q+  N D  C    KS  +           +L
Sbjct: 63  VSVAGRLMSRRIQGKAGFAELQDSQGRVQIYMNRDEICPGEDKSYYNNVYKKLVDLGDIL 122

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER-------EYPES 123
            + G V             TG++ +   +  +L+ A + LP P   E          PE 
Sbjct: 123 GVKGYVFKTQ---------TGELSIWVTEYILLTKAIKPLPQPKTDEDGKVHDAFTDPE- 172

Query: 124 IRFKYRFLDLR-----RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGA 177
           +R++ R++DL      RDT     +KRT+++N+MR  +  + ++E  TPIL        A
Sbjct: 173 LRYRQRYVDLVVNPQVRDTF----IKRTKLVNTMRDYLNDKGYLEVETPILQPLYGGAAA 228

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R F         + Y L  A + Y + L+  GFD  ++ +  FR+E       P EF Q+
Sbjct: 229 RPFKTHHNTLDMTLY-LRIANELYLKRLIVGGFDGVYEFSKDFRNEGMSRFHNP-EFTQV 286

Query: 238 DMEMSFVEQDDILNTMENVLRGV 260
           ++ +++ + + ++N +E ++  V
Sbjct: 287 ELYVAYKDYEWMMNLVEEMVEKV 309



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           RA + GMPP  G+  GIDR+ M++  +  ++EV  FP  +         P   +VE  + 
Sbjct: 469 RALEYGMPPTAGLGIGIDRLSMIMTNSSTIQEVLFFPQMRP-----EKQPVIATVEDYKS 523

Query: 587 LGLR 590
           +G+R
Sbjct: 524 IGVR 527


>gi|73945459|ref|XP_857854.1| PREDICTED: similar to Asparaginyl-tRNA synthetase, cytoplasmic
           (Asparagine--tRNA ligase) (AsnRS) isoform 3 [Canis
           familiaris]
          Length = 559

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 115/289 (39%), Gaps = 39/289 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 136 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 182

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V++  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 183 VLATESSVTVYGTLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 242

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+   + +     +  F + + P L  +  EG           
Sbjct: 243 NRHMMIRGENMSKILKARSVWPSQLAFVYSSSAFEQVTPPTLVQTQVEGGATLFKLDYFG 302

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  +
Sbjct: 303 EEAF--LTQSSQLYLETCIPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFE 359

Query: 248 DILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAI 283
           ++LN +E+++  V +                N       F R+ Y DAI
Sbjct: 360 ELLNRLEDLVCDVVDRVLKSPAGSIVRDLNPNFKPPKRPFKRMNYSDAI 408


>gi|15837714|ref|NP_298402.1| lysyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|11387145|sp|Q9PEB6|SYK_XYLFA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|9106069|gb|AAF83922.1|AE003947_2 lysyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 506

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 119/281 (42%), Gaps = 23/281 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ------VVANPDSACFEIAKSVRSEWVL 71
           G  VR++G +   R  G   F  I+D  G  Q      V+     A F++      + + 
Sbjct: 67  GDRVRMAGRLMAKRLMGKASFAQIQDESGRIQLLIQSNVLGEDSYAAFKVLDV--GDIIA 124

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              GL  +R          TG++ +    + +L+ A   PLP           R++ R++
Sbjct: 125 VEGGLTRTR----------TGELSVKVNVLRLLTKALR-PLPDKWHGLTDVEQRYRQRYV 173

Query: 132 DLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQG 189
           DL      + I +KR++II ++R  + A  F+E  TP++        A+ F+        
Sbjct: 174 DLIVTPESREIFIKRSKIIRALRTWLDARLFLEVETPMMHYIPGGAAAKPFVTYHNALDL 233

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  G +R ++I   FR+E   +   P EF  L++  ++    ++
Sbjct: 234 ELY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRHNP-EFTMLELYEAYSTYHEV 291

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           ++  E ++R   +       V  +  +I      RR+  D+
Sbjct: 292 MDLAETMIRDTAQSVLGTTQVIWDGAQIDLGPIFRRWRMDE 332



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L  NG EIA+G    +  E     F     +KE  ++    +   Y RA + GM P 
Sbjct: 414 RFELFINGKEIANGFSELNDPEEQAMRFQKQVEAKEGGDDEAMYYDADYIRALEYGMAPT 473

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG+  G+DR+VMLL G+ ++R+V LFP
Sbjct: 474 GGLGIGVDRLVMLLTGSTSIRDVLLFP 500


>gi|254508217|ref|ZP_05120341.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219548834|gb|EED25835.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 407

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 104/216 (48%), Gaps = 18/216 (8%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRII 149
           G + ++ +  E+L+ A   PLP        + +R++ R++DL    D+    I+ R++++
Sbjct: 30  GDLYVNMESYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFII-RSKLV 87

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           +++R  M ++ ++E  TP++    P GA  R F+          Y L  AP+ Y + L+ 
Sbjct: 88  SAIRNFMSSKGYLEVETPMMHVI-PGGATARPFITHHNALDIDMY-LRVAPELYLKRLVV 145

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            GFDR F+I   FR+E   S R   EF  ++   ++ +  D+++  E +L  V  +    
Sbjct: 146 GGFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYQAYADYRDLMDLTEEMLSTVAMDVLGS 204

Query: 268 NTV---------SNNFLRICYDDAIRRYGTDKPDLR 294
            ++            + R+   +AI+ Y  D  +++
Sbjct: 205 TSMPYGEETVEFGGKYARMSMFEAIKHYNPDHAEIQ 240



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ ML      +R+V LFP
Sbjct: 366 ALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFP 401


>gi|228937379|ref|ZP_04100026.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228970265|ref|ZP_04130925.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228976835|ref|ZP_04137248.1| Lysyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228782931|gb|EEM31096.1| Lysyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228789500|gb|EEM37419.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228822337|gb|EEM68318.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|326937869|gb|AEA13765.1| lysyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 499

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 126/288 (43%), Gaps = 39/288 (13%)

Query: 5   RTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RT+S  DL VS  G F           V ++G +   R  G   F  I+D +G  Q+   
Sbjct: 37  RTNSTTDL-VSLYGEFSKEELEEKEITVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVR 95

Query: 54  PDSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EE 109
            D+     +E+  +     ++ I+G V   +          G++ + A    +L+ +   
Sbjct: 96  KDTVGDEEYELFTTADLGDLVGIEGKVFKTNV---------GELSVKATGFTLLTKSLRP 146

Query: 110 LPLPVFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           LP    G ++  +  R++ R+LDL      R+T     V R++II  MR  +    ++E 
Sbjct: 147 LPDKYHGLKDVEQ--RYRQRYLDLITSMESRETF----VTRSKIIREMRRYLDDNGYLEV 200

Query: 165 STPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP++ A +    AR F           Y +  A + + + L+  G ++ ++I   FR+E
Sbjct: 201 ETPMMHAIAGGASARPFTTHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
              +   P EF  +++  ++ + +DI+   EN++  + ++     T+ 
Sbjct: 260 GVSTRHNP-EFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQ 306



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|268325213|emb|CBH38801.1| aspartyl-tRNA synthetase, C-terminal part [uncultured archaeon]
          Length = 157

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 9/109 (8%)

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
           A  PF      +E  KG+         +DL+    E++SG  R H  E++ +     G+ 
Sbjct: 50  AIKPFYAQPADVEGGKGD-----ICNAFDLMHPRLELSSGSQRVHSYELLKRQIETKGLG 104

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  E        AF+ GMPPH G   G++R++M +L   N+REV LFP
Sbjct: 105 ADSFEFYL----DAFRYGMPPHAGWGLGVERLLMSMLEIDNIREVVLFP 149


>gi|209694158|ref|YP_002262086.1| lysyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|226710881|sp|B6EMX2|SYK_ALISL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|208008109|emb|CAQ78251.1| lysyl-tRNA synthetase, heat inducible [Aliivibrio salmonicida
           LFI1238]
          Length = 501

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 8/154 (5%)

Query: 111 PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
           PLP        + +R++ R++DL    D+    I+ R+++++++R  M+ + F+E  TP+
Sbjct: 142 PLPEKFHGLTDQEMRYRQRYVDLIVNEDSRTAFII-RSKVVSAIRNFMVDKGFMEVETPM 200

Query: 169 LTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +    P GA  R F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   
Sbjct: 201 MHVI-PGGASARPFVTHHNALDVDMY-LRVAPELYLKRLVVGGFERVFEINRNFRNEG-L 257

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           S R   EF  ++  M++ + +D+++  E +L  V
Sbjct: 258 SPRHNPEFTMMEFYMAYADYNDLMDLTEAMLSQV 291



 Score = 41.2 bits (95), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 460 ALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 495


>gi|15841096|ref|NP_336133.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|308401001|ref|ZP_07493334.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu012]
 gi|13881311|gb|AAK45947.1| lysyl-tRNA synthetase, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|308366166|gb|EFP55017.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu012]
          Length = 1185

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 23/230 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC- 58
           R  +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+   +  D  C 
Sbjct: 721 RPPSHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCA 780

Query: 59  --FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  A  +       ++      +++T   ++I     L  + +         PLP   
Sbjct: 781 ADFNAATDLGD----LVEMTGHMGASKTGTPSLIVSGWRLIGKCLR--------PLPNKW 828

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL      
Sbjct: 829 KGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGG 888

Query: 175 EGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AR F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 889 ATARPFV--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 936



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 41/214 (19%)

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----IAGDPLKFCSFAADARNHI 420
            E  +++G+ PV + ++   +EA+  R+D   G +        AG P +    A      +
Sbjct: 999  EPVDISGIWPV-RTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLEL 1057

Query: 421  AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             + L  + C   +  + +DFP             + +P T P     S +G       A 
Sbjct: 1058 YEHL--VECRTEQPTFYIDFPT------------SVSPLTRPH---RSKRG------VAE 1094

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +  
Sbjct: 1095 RWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAMEYA 1150

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1151 MPPTGGLGMGIDRVVMLITG-RSIRETLPFPLAK 1183


>gi|295425663|ref|ZP_06818350.1| lysine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295064679|gb|EFG55600.1| lysine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 516

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 19/246 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
            +++G +   R  G + F D+ D  G  Q+    D      ++I K       L IDG V
Sbjct: 61  TKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIDGEV 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
           M            TG++ + A  +  LS A   LP    G ++  +  R +Y  L   R+
Sbjct: 121 MKTD---------TGELTIRALHVTFLSKALRPLPDKYHGLKDVEQIYRQRYLDLITNRE 171

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYAL 194
           + +   V RT+II ++R  +   +F+E  TP+L  + P G  AR F+          Y  
Sbjct: 172 S-YMRFVHRTQIIQAIRDYLNKRDFLEVETPVL-HNIPGGAEARPFITHHNALDIDLYMR 229

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
                  K+L++    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  E
Sbjct: 230 IALELPLKRLIVGD-MERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDFHDVMDEAE 287

Query: 255 NVLRGV 260
            ++R  
Sbjct: 288 GIIRAA 293



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP
Sbjct: 454 RAMEFGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFP 490


>gi|302876675|ref|YP_003845308.1| asparaginyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307687350|ref|ZP_07629796.1| asparaginyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302579532|gb|ADL53544.1| asparaginyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 463

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 120/304 (39%), Gaps = 51/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDG-LV 77
           +R+SGWV  +R +    F+++ D   +   QVV   +   F+    +     L I+G LV
Sbjct: 21  IRISGWVRTIRANNNFGFIELNDGSFFKSVQVVFENNLENFKEVSKLAISASLEIEGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           ++  A+           E+ A+ I I   +     P+  +R   E +R     L  R +T
Sbjct: 81  LTPEAKQ--------PFEVKAESIMIHGNSHS-DYPLQKKRHTMEYLR-TIAHLRPRSNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---------- 187
                  R+    ++        F+   TPI+T S  EGA +    + ++          
Sbjct: 131 FSAVFRVRSLAAYAIHKFFQERGFVYVHTPIITGSDCEGAGEMFKVTTLDFDNVKKTEEG 190

Query: 188 ----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
               Q  F+          QL     A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 191 KIDYQDDFFGRETNLTVSGQLSAETFALAFRDVYTFGPTFRAENSNTTRHAAEFWMIEPE 250

Query: 241 MSFVEQDDILNTMENVLRGV-----------FEEFSN----------GNTVSNNFLRICY 279
           M+F E  D ++T E++++ +            E FSN           N V++ F R+ Y
Sbjct: 251 MAFAELKDYMDTAEDMIKYIISYVMENAPEEMEFFSNFVDKGLKERLDNVVNSEFGRVSY 310

Query: 280 DDAI 283
            +A+
Sbjct: 311 TEAV 314



 Score = 38.9 bits (89), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G  R    +++    + +G++KE     +       + G   H G   
Sbjct: 378 DLLAPGIGEIIGGSQREERLDILEARLAELGLNKE----DYWWYLELRKYGETKHAGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +RI+M L G  N+R+V  FP +
Sbjct: 434 GFERILMYLTGMSNIRDVIPFPRT 457


>gi|332703876|ref|ZP_08423964.1| Lysyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332554025|gb|EGJ51069.1| Lysyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 523

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 118/254 (46%), Gaps = 20/254 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLVMS 79
           ++G +  +R  G   F  ++D  G  QV A+ D      + + K +    ++ + G +  
Sbjct: 89  VAGRIVAMRSFGKAAFFHLQDPTGRLQVFASRDDLGEDAYRVFKKLDMGDLVGVRGTLF- 147

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                   +  TG++ L + +I +L+ +   PLP          +R++ R++DL      
Sbjct: 148 --------HTKTGELTLKSSQITLLTKSLR-PLPDKWHGLKDVEMRYRQRYVDLIVTPRT 198

Query: 140 KNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQ 196
           + I +KRT+++  MR  +  E F+E  TP++    P G  A+ F           Y +  
Sbjct: 199 REIFLKRTQVVREMRNFLDREGFMEVETPMM-QPIPGGATAKPFETHHNALDMKLY-MRI 256

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF++ +++   FR+E   +   P EF   +   ++   +D+++  E +
Sbjct: 257 APELYLKRLLVGGFEKVYEVNRNFRNEGISTQHNP-EFTMCEFYWAYATFEDLMDLTERM 315

Query: 257 LRGVFEEFSNGNTV 270
              + ++ + GNTV
Sbjct: 316 FAHIAQQVT-GNTV 328



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL  + ++REV LFP+
Sbjct: 481 RALEYGMPPAAGQGIGIDRLVMLLTDSPSIREVILFPL 518


>gi|253744599|gb|EET00785.1| Asparaginyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 548

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 27/255 (10%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK-SVRSEW-VLCIDGLV 77
           V + GW HRVR     + F+ +RD  G  Q+V N       I + S+R+E  V  +  LV
Sbjct: 120 VTVYGWCHRVRVSSPKLAFVVLRDGTGYCQLVLNEVCMATRIVQTSLRTEAAVKAVGTLV 179

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYPES---IRFKYRFL 131
               A+        G  E+     +I+        P  GE   R  PES    R + R L
Sbjct: 180 TDERAQ--------GGYEIQCLYFDIIG-------PSSGEFETRITPESGPDARARERHL 224

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
             R +     +  R RI+ + R     + + E + P +  +  EG           + ++
Sbjct: 225 IHRGEHGSAILKARGRILRAFRNHFYFKGWTEVTPPTIVNTECEGGSSLFKVDFYGEDAY 284

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y + ++++  D Y  I P +R E   + R   EF  L+ E  F+   D+L 
Sbjct: 285 --LTQSSQLYLESVISALGDVYC-ILPSYRAEKSNTRRHLSEFTHLETEHPFITFSDLLG 341

Query: 252 TMENVLRGVFEEFSN 266
            +E+ +  V  E  N
Sbjct: 342 IIEDFVISVVTELKN 356



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 4/80 (5%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G +R    E   +AF + G+  E    R+       + G  PHGG+  G+
Sbjct: 465 LVPTVGEIVGGSMRKWTYEDTYKAFLDAGMPIE----RYYWYLDTRKFGGCPHGGMGLGL 520

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           +R +  LLG   VR+  L+P
Sbjct: 521 ERFICWLLGIYTVRDTVLYP 540


>gi|149371919|ref|ZP_01891238.1| lysyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149355059|gb|EDM43620.1| lysyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 563

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 118/252 (46%), Gaps = 17/252 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-G 75
           G  V ++G + R +  G   F +++D  G  QV  N D  C    K++ ++ +   +D G
Sbjct: 46  GKKVVIAGRLMRKKIQGKASFGELQDSEGRIQVYFNRDEICEGEDKTLYNDVFKKLLDLG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLP-------VFGEREYPESIRFK 127
             +  + E     +  G+  +  ++  +LS   + LPLP        + E   PE +R++
Sbjct: 106 DFIGITGELFTTQV--GEPTVLVKEFTLLSKTLKPLPLPKTDAEGKTYDEFNDPE-LRYR 162

Query: 128 YRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R++DL  +   K + K RT++ N+MR      ++ E  TPIL   +    AR F+    
Sbjct: 163 QRYVDLVVNPKVKEVFKKRTKLFNAMRTFFNERDYFEVETPILQPIAGGAAARPFITHHN 222

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +S+ +
Sbjct: 223 SLDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVSYKD 280

Query: 246 QDDILNTMENVL 257
            + +++  E +L
Sbjct: 281 YNWMMDFCEQLL 292



 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L    +++EV  FP
Sbjct: 456 RALEYGMPPTSGMGIGMDRLIMYLTNNPSIQEVLFFP 492


>gi|326562874|gb|EGE13161.1| lysyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 507

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 15/178 (8%)

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDF 180
           ++++ R+LDL  +   +N    R +++  +R  +  E F+E  TP++    P GA  R F
Sbjct: 167 VKYRKRYLDLMVNEETRNTFAIRAKVVAGIRAFLTQERFMEVETPMMHVI-PGGASARPF 225

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GFDR F+I   FR+E   +   P EF  ++  
Sbjct: 226 VTHHNALDMQLY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGVSTRHNP-EFTMIEFY 283

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTD 289
            ++ +  D++   E +L  +  +      VS           F +I   DAI  Y +D
Sbjct: 284 QAYADYKDLMALTERMLETLAMDILGSTDVSYQGEVFSFKGPFKKITMFDAILEYNSD 341



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 467 ALEYGLPPTAGEGIGIDRLVMLFADAASIRDVILFP 502


>gi|319789983|ref|YP_004151616.1| lysyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114485|gb|ADU96975.1| lysyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 517

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 125/293 (42%), Gaps = 26/293 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMSRS 81
           L+G +  +R  G   F  I+D  G  Q     D+   E    V   +   ID G ++   
Sbjct: 68  LAGRIVSMRVMGKAAFFHIQDESGRLQCYIRRDTVGEEFYNKV---FKRLIDIGDIVGVK 124

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                    TG++ L  +++  L+ +   PLP           R++ R+LDL  +   + 
Sbjct: 125 GTLFRTR--TGELTLEVKELTPLTKSLR-PLPEKWHGLKDTEKRYRQRYLDLIVNPEVRE 181

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           + + RT +I ++R  + +  F+E  TPIL   +S   A+ F+          Y L  AP+
Sbjct: 182 VFRTRTEVIKAIREFLDSRGFLEVETPILQPIASGAAAKPFITHYNALDIDVY-LRIAPE 240

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR- 258
            Y + L+  GF+R +++   FR+E   +   P EF  ++  M++ +  D++   E +   
Sbjct: 241 LYLKRLLVGGFERVYELGKNFRNEGISTRHNP-EFTMVEWYMAYADYYDLMEMTEELFEF 299

Query: 259 --------GVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
                   GV E    G  +S    F RI Y + + +     PD     ++HN
Sbjct: 300 LLDRLYGPGVREIEYQGTKISFKRPFRRISYLEELSKKTGLTPDE----LLHN 348



 Score = 44.3 bits (103), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G   GIDR+VML     ++REV LFP
Sbjct: 465 ALEYGMPPTAGEGIGIDRLVMLFTDKDSIREVLLFP 500


>gi|306779639|ref|ZP_07417976.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu002]
 gi|308327440|gb|EFP16291.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu002]
          Length = 727

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 23/230 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC- 58
           R  +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+   +  D  C 
Sbjct: 263 RPPSHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCA 322

Query: 59  --FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  A  +       ++      +++T   ++I     L  + +         PLP   
Sbjct: 323 ADFNAATDLGD----LVEMTGHMGASKTGTPSLIVSGWRLIGKCLR--------PLPNKW 370

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL      
Sbjct: 371 KGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGG 430

Query: 175 EGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AR F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 431 ATARPFV--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 478



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 41/214 (19%)

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF----IAGDPLKFCSFAADARNHI 420
           E  +++G+ PV + ++   +EA+  R+D   G +        AG P +    A      +
Sbjct: 541 EPVDISGIWPV-RTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLEL 599

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + L  + C   +  + +DFP             + +P T P     S +G       A 
Sbjct: 600 YEHL--VECRTEQPTFYIDFPT------------SVSPLTRPH---RSKRG------VAE 636

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +  
Sbjct: 637 RWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAMEYA 692

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 693 MPPTGGLGMGIDRVVMLITG-RSIRETLPFPLAK 725


>gi|163857080|ref|YP_001631378.1| lysyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|226710883|sp|A9IQY2|SYK_BORPD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|163260808|emb|CAP43110.1| lysyl-tRNA synthetase [Bordetella petrii]
          Length = 506

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 21/253 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW--- 69
            ++  G  V+++G +   R  G   F  ++D  G  Q+  +  +   E A +   +W   
Sbjct: 58  ALAAAGVQVKVAGRMMLKRVMGKASFATVQDGSGRIQIYLDRGTLGDE-AYAAFKQWDIG 116

Query: 70  -VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ I+G V   +          G++ + A    +LS +   PLP        + +R++ 
Sbjct: 117 DIIAIEGSVFKTN---------KGELSVHAATARLLSKSLR-PLPDKFHGVADQELRYRQ 166

Query: 129 RFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSR 185
           R++DL   D   +    R++ + S+R  M+   F+E  TP+L    P GA  + F+    
Sbjct: 167 RYVDLIMTDATRRTFETRSKAVGSIRQVMLDAGFLEVETPMLH-PIPGGAAAKPFVTHHN 225

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 + L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +
Sbjct: 226 ALDMEMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYAD 283

Query: 246 QDDILNTMENVLR 258
              +++  E+VLR
Sbjct: 284 YRWLMDFTEHVLR 296



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E   + F     +K+  +     F   Y RA + GMPP 
Sbjct: 414 RFELFMTGREIANGFSELNDPEDQAERFRAQVEAKDAGDEEAMYFDADYIRALEYGMPPT 473

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 474 GGCGIGIDRLVMLLTNSPSIRDVILFP 500


>gi|71908461|ref|YP_286048.1| lysyl-tRNA synthetase, class-2 [Dechloromonas aromatica RCB]
 gi|123733161|sp|Q47C53|SYK_DECAR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71848082|gb|AAZ47578.1| Lysyl-tRNA synthetase, class-2 [Dechloromonas aromatica RCB]
          Length = 501

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 134/305 (43%), Gaps = 34/305 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V+++G +   R  G   F  I+D  G  Q+    D    E+    ++ W    ++ + G 
Sbjct: 67  VKVAGRLMLKRVMGKASFATIQDLSGRIQIYITRDRVGEEVYADFKT-WDLGDIIGVTGS 125

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +M            TG++ + A +I +L+ +   PLP        + ++++ R++DL  +
Sbjct: 126 LMKTK---------TGELSIQAAEIRLLTKSLR-PLPDKFHGLADQEMKYRQRYVDLIMN 175

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP-SRVNQGSFY 192
              +   + R+ I+ S+R  M    F+E  TP++    P GA  + F+   + ++   F 
Sbjct: 176 EETRFTFRARSAIVASIRNYMTGHGFMEVETPMMH-PIPGGASAKPFVTHHNALDMQQFL 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y + L+  GF++ F+I   FR+E   S R   EF  ++   ++     +++ 
Sbjct: 235 RI--APELYLKRLVVGGFEKVFEINRNFRNEG-LSPRHNPEFTMMEFYEAYANYHTLMDF 291

Query: 253 MENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRRYGTDKPD--LRNPIIMHN 301
            E +LR    E               +S  F R+  + AI+R   +  D  L +P  +  
Sbjct: 292 TEGLLRHAAREALGKEVFVYQGRELDLSKPFHRLTINQAIQRQHPEFSDAELADPEFLKA 351

Query: 302 VTEHF 306
             +HF
Sbjct: 352 KIKHF 356



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+G    + +E     F     +K+  +           RA + G+PP 
Sbjct: 410 RFELFIVGREIANGFSELNDAEDQAARFQEQMKAKDAGDEEAMYYDADFIRALEYGLPPT 469

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR++MLL  A  +R+V LFP
Sbjct: 470 GGCGIGIDRLIMLLTDAAAIRDVILFP 496


>gi|146093432|ref|XP_001466827.1| lysyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134071191|emb|CAM69876.1| putative lysyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 536

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 34/253 (13%)

Query: 34  GGIIFLDIRDHYGITQVVANPDSACFE-----IAKSVRSEWVLCIDGLVMSRSAETINAN 88
           GGI+F+ IR      QV+   + +  +      A ++ +  +L   G V  R+A+     
Sbjct: 2   GGILFITIRSGEAQLQVLRQVNESFTKADLRAFASTLHTGDILGATG-VPGRTAK----- 55

Query: 89  IITGQIELSAQKIEILSVAEELPLPVFGEREYPE----------SIRFKYRFLDLRRD-T 137
              G++ L A +  IL+     P     +   P+           I+++YRF+D+    +
Sbjct: 56  ---GELSLYATEASILA-----PYVCTDQALCPDLKGFVPLTDTGIKYRYRFVDMMSSPS 107

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
           + +   KR  I  ++R  + A +F+E  TP+L + +S   A+ F+     N    + L  
Sbjct: 108 VVQRFRKRHAITRALRDFLDARSFVEVETPVLHSVASGANAKPFVTHHNANDADLF-LRV 166

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + +  +  G +R ++I   FR+ED      P EF   +   ++    D++   E +
Sbjct: 167 APELHLKQCVVGGMERVYEIGRVFRNEDADRSHNP-EFTTCEFYAAYHTYKDLMTMTEEI 225

Query: 257 LRGVFEEFSNGNT 269
           LR +    +NG T
Sbjct: 226 LRHL-ALAANGTT 237



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A Q G+PP  G   GIDR+ MLL G+  +RE  LFP+
Sbjct: 402 KALQVGLPPTAGWGMGIDRVAMLLNGSSTIREDILFPL 439


>gi|284037331|ref|YP_003387261.1| asparaginyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283816624|gb|ADB38462.1| asparaginyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 479

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 112/291 (38%), Gaps = 41/291 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69
           L  +  G+ V + GWV   R     +F+ + D   I   Q VA       E  K + +  
Sbjct: 10  LKTAPTGTEVTVKGWVRTKRESKNAVFIALNDGSTINTIQAVAEAGQLPEETLKLITTGA 69

Query: 70  VLCIDG-LVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
            L + G LV S+ A         GQ +E+    + I   A+    P+  +R   E +R +
Sbjct: 70  CLAVTGQLVESQGA---------GQAVEVKIANVTIYGTADPDKYPLQPKRHSLEFLR-E 119

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RD 179
              L  R +T    +  R  +  ++        F   +TPI+TAS  EGA         D
Sbjct: 120 IAHLRPRTNTFSAILRIRHALAFAVHKYFNDNGFYYLNTPIITASDAEGAGEMFRVTTLD 179

Query: 180 FLVPSRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRL 230
              P     G       F+          QL   L A    + +   P FR E+  + R 
Sbjct: 180 ATKPPLTEDGKVDYSQDFFGRETNLTVSGQLEGELGAMALGKIYTFGPTFRAENSNTTRH 239

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
             EF+ ++ EM+F E +D +N  E+ ++          TV    L+ C DD
Sbjct: 240 LAEFWMIEPEMAFYELEDNMNLAEDFVK----------TVIRYALQHCADD 280


>gi|119502780|ref|ZP_01624865.1| asparaginyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119461126|gb|EAW42216.1| asparaginyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 465

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 116/284 (40%), Gaps = 56/284 (19%)

Query: 15  SDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           S VG  + + GW+   R    GI FL + D              CF+  ++V    +   
Sbjct: 15  SQVGQSITVKGWLRSKRDSKAGISFLAVHD------------GTCFDAIQAVVPNTLSNY 62

Query: 74  DGLVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYPESI-----R 125
           D  V+  +  T  A  + GQ+ +S    Q +EI + A    + V G  + PES      R
Sbjct: 63  DEEVLQLA--TGCAVEVAGQLVVSEGKGQSVEIQATA----VTVIGWVDDPESYPIAKKR 116

Query: 126 FKYRFL----DLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + +L     LR  T     + R R  +  ++      ++F   +TPI+TAS  EGA +
Sbjct: 117 HTFEYLRTQAHLRTRTNTFGAITRVRHVLARAIHEYFHRQDFYWVNTPIITASDCEGAGE 176

Query: 180 FLVPSRVNQGSFYALPQAP-------QQY---KQLLMASG----------FDRYFQIAPC 219
                RV+   +  LP+ P       Q +   +  L  SG            R +   P 
Sbjct: 177 LF---RVSTLDYANLPRNPDGSVDHSQDFFGSEAFLTVSGQLAVESHCLSMSRVYTFGPT 233

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           FR E+  + R   EF+ ++ E++F + +D     E +LR V  E
Sbjct: 234 FRAENSNTTRHLAEFWMVEPEIAFADLNDNAALAEGLLRHVIAE 277


>gi|1001357|dbj|BAA10844.1| asparaginyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 513

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 123/305 (40%), Gaps = 50/305 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLV 77
           V + GW+   R      F+++ D   +   QVV +   A ++ +   +++   L ++G +
Sbjct: 70  VMVQGWLRTKRTLKDFSFVEVNDGSSLANLQVVLDGSLADYDRLLSQLQTGAALVVEGKL 129

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                +        GQ +EL A K+E+L  A+    P+  +R   E +R     L  R +
Sbjct: 130 APSPGK--------GQRVELKATKLELLGGADPGSYPLQKKRHSFEFLR-TIGHLRPRTN 180

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--------Q 188
           T+   +  R     ++        F+   TPI+TAS  EGA D    + ++        +
Sbjct: 181 TIGAVMRVRNACATAIHQFFQERGFLWVHTPIITASDCEGAGDLFKVTTLDLQRVPKNGE 240

Query: 189 GSFY--------ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           G  Y        A      Q +  +MA  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 241 GIDYSQDFFGKQAYLTVSGQLEAEVMALAFQNVYTFGPTFRAENSNTSRHLAEFWMVEPE 300

Query: 241 MSFVEQDDILNTMENVLRGVFE----------EF-----------SNGNTVSNNFLRICY 279
           M+F + +      E  L+ +F+          EF           +  N ++N F  + Y
Sbjct: 301 MAFCDLEGDRQWAEEFLKYIFKFVLEKCPEDMEFFDQRIDNTVLATADNIINNEFAWLTY 360

Query: 280 DDAIR 284
            +AI+
Sbjct: 361 SEAIK 365


>gi|330752807|emb|CBL88326.1| lysyl-tRNA synthetase [uncultured Dokdonia sp.]
          Length = 564

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 17/252 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-G 75
           G  V ++G +   R  G   F +I+D  G  QV  N D  C E  KS  +E +   +D G
Sbjct: 46  GEKVVMAGRLMSRRIQGNASFAEIQDGEGRIQVYFNRDEICTEEDKSKYNEVYKKLLDIG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP-------VFGEREYPESIRFK 127
             +    E     +  G+I +  +   +LS A + LP P       V      PE +R++
Sbjct: 106 DFIGIEGEMFTTKV--GEITVLVKDFTLLSKALKPLPQPRTDDEGKVHDAFTDPE-MRYR 162

Query: 128 YRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R++DL  +   K + VKRT++ N+MR       + E  TP+L   +    AR F+    
Sbjct: 163 QRYVDLTVNPHVKEVFVKRTKLFNAMRNFFNDAGYFEVETPVLQPIAGGAAARPFITHHN 222

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y +  A + Y + L+  GF+  ++ +  FR+E       P EF  +++ +++ +
Sbjct: 223 SLDIPLY-MRIANELYLKRLIVGGFEGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKD 280

Query: 246 QDDILNTMENVL 257
            + +++  E +L
Sbjct: 281 YNWMMDFCEQLL 292



 Score = 42.0 bits (97), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           R+ + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 456 RSLEYGMPPTSGMGIGMDRLIMFLTNNQSIQEVLFFP 492


>gi|254823223|ref|ZP_05228224.1| lysyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 498

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 118/260 (45%), Gaps = 23/260 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEW 69
           D    DV   V ++G V   R  G + F  +++  G T QV+ + D    ++ +     W
Sbjct: 53  DTATDDV---VGVAGRVIFARNSGKLCFATLQEGDGTTLQVMVSLD----KVGRQSLDAW 105

Query: 70  VLCID-GLVMSRSAETINANIIT---GQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
              +D G ++      ++ N+I+   G++ + A    + S +   PLPV   +E  E  R
Sbjct: 106 KADVDLGDIVY-----VHGNVISSRRGELSVLADSWRMASKSLR-PLPV-AHKEMSEEAR 158

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP 183
            + R++DL      + + + R  +I ++R  +    F+E  TP+L T +    AR F+  
Sbjct: 159 VRQRYVDLIVRPQARTVARQRIAVIRAIRNALERRGFLEVETPMLQTLAGGAAARPFITH 218

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           S       Y L  AP+ + +  +  GFDR F++   FR+E   S   P EF  L+   ++
Sbjct: 219 SNALDIDLY-LRIAPELFLKRCVVGGFDRVFELNRVFRNEGADSTHSP-EFSMLETYQAY 276

Query: 244 VEQDDILNTMENVLRGVFEE 263
              DD       +++ V +E
Sbjct: 277 GTYDDSAVVTRELIQEVADE 296


>gi|118467307|ref|YP_882312.1| lysyl-tRNA synthetase [Mycobacterium avium 104]
 gi|118168594|gb|ABK69491.1| lysyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 1075

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 23/227 (10%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D    + ++G + R+R  GG++F  +RD  G  QV+   D++  E  ++ 
Sbjct: 621 SHTVAQALDADDQQDITVAGRILRIRDFGGVLFAQLRDWSGEMQVLL--DNSRLERGRTA 678

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-------LPLPVFGER 118
                + +  LV            ++GQ+  S +    L V +         PLP   + 
Sbjct: 679 DFTAAIDLGDLVE-----------VSGQMGFSKKGTRSLIVTDWRMIGKCLRPLPNKWKG 727

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                 R + R++DL  +   + ++  R+ ++ S+R  + A+ FIE  TPIL        
Sbjct: 728 LTDPEARVRTRYVDLAVNPESRELIAARSEVLRSVRQTLFAKGFIEVETPILQQIHGGAT 787

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           AR F+          + L  AP+ Y + L   G +R F++   FR+E
Sbjct: 788 ARPFVTHINTYDMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNE 833



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+A+           R  + E  L A      + E+ E+      +A +
Sbjct: 983  AERWDLVAWGVELATAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAME 1038

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  G+DR+VML+ G +++RE   FP+++
Sbjct: 1039 YAMPPTGGLGMGVDRLVMLITG-RSIRETLPFPLAK 1073


>gi|327298437|ref|XP_003233912.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326464090|gb|EGD89543.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 567

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 16/182 (8%)

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
           NI++ R+ I +SMR    +  F+E +TPIL + S    A+ F+  +        +L  AP
Sbjct: 226 NILRARSLITHSMRNFFASREFMEVNTPILASKSGGAIAQPFVTSATEFPDRPLSLRIAP 285

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+  GFDR F+I P FR+E       P EF   +   +F + + ++ T E++L 
Sbjct: 286 ELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP-EFTTCEFYQAFADLESLIETTESLLS 344

Query: 259 GVFEEFSNGNTVSNNFLR---ICYDDAIRRY----------GTDKPDLRNPIIMHNVTEH 305
            +  +    N   NN L    + +    RR           G   PDL++   +  V E 
Sbjct: 345 TLAIDVQQLNKKLNNSLSPTTVSFTGPYRRVDFIPAIEAAIGRKLPDLQSGNALSQVKEI 404

Query: 306 FV 307
           F 
Sbjct: 405 FA 406



 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 23/39 (58%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G  +  + G+PP GG   GIDR+ ML  GA+ + +V  F
Sbjct: 511 GYLQTLEWGLPPTGGWGCGIDRLCMLFTGARRISDVLSF 549


>gi|300214471|gb|ADJ78887.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 385

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 13/200 (6%)

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F +AK V+ E  L + G++                  +  ++IE++  + E P+     
Sbjct: 9   TFALAKEVKQETSLYVTGVIHEDKRSHFGYE-------IEIEEIEVVGESNEYPI---TP 58

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           +E+       +R L LR       +  R  +I +       E FI+   PILT S+PEG 
Sbjct: 59  KEHGTDFLMDHRHLWLRSKKQFAIMQIRNEMIRATYEFFNKEGFIKLDAPILTGSAPEGT 118

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +       ++ ++  L Q+ Q Y++   A  + + F   P FR E  ++ R   EF+ +
Sbjct: 119 TELFHTEYFDRDAY--LSQSGQLYEEA-GAMAYGKVFSFGPTFRAEKSKTRRHLIEFWMI 175

Query: 238 DMEMSFVEQDDILNTMENVL 257
           + EM+F+ Q++ L   E  +
Sbjct: 176 EPEMAFMHQEESLEIQERYV 195


>gi|91775150|ref|YP_544906.1| lysyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|123380554|sp|Q1H372|SYK_METFK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|91709137|gb|ABE49065.1| lysyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 509

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +Y+L   G EIA+G    + +E     F     +KE  ++      G   RA + GMPP 
Sbjct: 417 RYELFITGREIANGFSELNDAEDQAARFHAQVAAKEAGDDEAMYYDGDFIRALEYGMPPT 476

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 477 GGCGIGIDRLVMLLTDSPSIRDVILFP 503



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 84/170 (49%), Gaps = 5/170 (2%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           TG++ +   ++ +L+ +   PLP        +  +++ R++DL   +   K  V R++I+
Sbjct: 137 TGELSVKVSELRLLTKSLR-PLPEKFHGLADQETKYRQRYVDLIVSEETRKTFVARSKIV 195

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            ++R  M++  F+E  TP+L        A+ F+          Y +  AP+ Y + L+  
Sbjct: 196 AAIRAFMLSHEFLEVETPMLHPIPGGAAAKPFITHHNALDLQMY-MRIAPELYLKRLVVG 254

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E+ +R
Sbjct: 255 GFERVFEINRNFRNEG-LSVRHNPEFTMMEFYAAYTDYKWLMDFTESCIR 303


>gi|237786207|ref|YP_002906912.1| lysyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237759119|gb|ACR18369.1| lysyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 536

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 15/252 (5%)

Query: 12  LGVSD-VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           LG+ D   + V ++G V  +R  G + F  +++  G TQ+ A    A  E+ +     W 
Sbjct: 71  LGIGDETDTEVAVAGRVIFMRNTGKLCFATLQEGDG-TQLQAMLSLA--EVGEDALKRWK 127

Query: 71  LCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFKY 128
             +D G  +S     +++    G++ + A    + S A   PLPV F +    E  R +Y
Sbjct: 128 SDVDMGDFVSIRGRVVSSR--RGELSVFASTWTLASKALR-PLPVSFADMN--EDTRIRY 182

Query: 129 RFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRV 186
           R+ DL  RD   + ++ R  ++ ++R  +    F+E  TP+L T      AR F+  S  
Sbjct: 183 RYTDLIMRDDARRMMITRVTVVRAVREYLQGLGFLEVETPMLQTLHGGAAARPFVTHSNA 242

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  AP+ Y +  +  G ++ F++   FR+E   S   P EF  L+   ++   
Sbjct: 243 LDMDLY-LRIAPELYLKRCVVGGIEKVFEVNRNFRNEGIDSSHSP-EFAMLETYQAYATY 300

Query: 247 DDILNTMENVLR 258
           DD   + + +++
Sbjct: 301 DDNAASTQGLIQ 312



 Score = 44.7 bits (104), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSN-----VGISKE--VVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        +  Q F +      G   E  V++  F    +A + GM
Sbjct: 445 KWDLYVRGFELATGYSELIDPVIQRQRFEDQARLAAGGDDEAMVLDEDF---LQAMEQGM 501

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   GIDR++M L G   +RE  LFP+
Sbjct: 502 PPTAGTGMGIDRLLMALTGL-GIRETVLFPL 531


>gi|149277988|ref|ZP_01884127.1| lysine--tRNA ligase [Pedobacter sp. BAL39]
 gi|149231186|gb|EDM36566.1| lysine--tRNA ligase [Pedobacter sp. BAL39]
          Length = 592

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 14/214 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + ++G +   R  G   F++++D  G  QV    D  C +  K++ +     +  L    
Sbjct: 74  ISIAGRIMSRRIMGSASFVELQDSTGRIQVYLKRDDLCPDEDKTLYNTVFKKLMDLGDFI 133

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---------PESIRFKYRFL 131
                     TG+I L   ++++LS + + PLP+    E          PE +R++ R++
Sbjct: 134 GVRGYVFTTQTGEISLHVSELKLLSKSLK-PLPIVKRDEEGKIYDGFTDPE-LRYRQRYV 191

Query: 132 DLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +   K I + R+R+I++MR     + ++E  TPIL        AR F         
Sbjct: 192 DLTVNPDFKQIFINRSRVISTMRNYFDEQGWMEVETPILQPIHGGAAARPFATHHNTLDM 251

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             Y L  A + Y + L+ +GFD  ++    FR+E
Sbjct: 252 PLY-LRIANELYLKRLIVAGFDGVYEFGKMFRNE 284



 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  GIDR+VML+     ++EV  FP
Sbjct: 480 RALEYGMPPTSGLGFGIDRLVMLMTNQSTIQEVLFFP 516


>gi|296113238|ref|YP_003627176.1| lysyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295920932|gb|ADG61283.1| lysyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|326560229|gb|EGE10617.1| lysyl-tRNA synthetase [Moraxella catarrhalis 7169]
 gi|326566453|gb|EGE16603.1| lysyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326570260|gb|EGE20305.1| lysyl-tRNA synthetase [Moraxella catarrhalis BC8]
 gi|326570997|gb|EGE21021.1| lysyl-tRNA synthetase [Moraxella catarrhalis BC7]
 gi|326576889|gb|EGE26795.1| lysyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 507

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 15/178 (8%)

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDF 180
           ++++ R+LDL  +   +N    R +++  +R  +  E F+E  TP++    P GA  R F
Sbjct: 167 VKYRKRYLDLMVNEETRNTFAIRAKVVAGIRAFLTQERFMEVETPMMHVI-PGGASARPF 225

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GFDR F+I   FR+E   +   P EF  ++  
Sbjct: 226 VTHHNALDMQLY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGVSTRHNP-EFTMIEFY 283

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTD 289
            ++ +  D++   E +L  +  +      VS           F +I   DAI  Y +D
Sbjct: 284 QAYADYKDLMALTERMLETLAMDILGSTDVSYQGEVFSFKGPFKKITMFDAILEYNSD 341



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 467 ALEYGLPPTAGEGIGIDRLVMLFADAASIRDVILFP 502


>gi|238028012|ref|YP_002912243.1| lysyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237877206|gb|ACR29539.1| Lysyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 508

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 127/301 (42%), Gaps = 26/301 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VRL+G +   R  G   F  ++D  G  Q    P     E   + + +W L   G +++ 
Sbjct: 68  VRLAGRMMLKRVMGKASFATVQDGSGQIQFFVTPADVGAETYDAFK-KWDL---GDIVAA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N   G++ +   ++ +LS A   PLP        + +R++ R++DL      +
Sbjct: 124 RGVLFRTN--KGELSVKCSELRLLSKALR-PLPDKFHGLADQEMRYRQRYVDLIVTPETR 180

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  + RT+ I S+R  M    F+E  TP+L        A+ F+          + L  AP
Sbjct: 181 NTFRARTKAIASIRKFMSDAEFMEVETPMLHPIPGGAAAKPFITHHNALDMQMF-LRIAP 239

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Y + L+  GF+R F+I   FR+E   PR +    EF  ++   ++ +   +++  E +
Sbjct: 240 ELYLKRLIVGGFERVFEINRNFRNEGVSPRHN---PEFTMMEFYAAYTDYRWLMDFTEQL 296

Query: 257 LRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRNPIIMHNVTEH 305
           +R    +     T+         +  F R+    AI++Y  G     L +P  +    + 
Sbjct: 297 IRQAAIDALGTATIQYQGRELDLARPFHRLTITQAIQKYAPGYGDAQLADPAFLRTELKR 356

Query: 306 F 306
           F
Sbjct: 357 F 357



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFMTGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|229131084|ref|ZP_04259997.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228652421|gb|EEL08345.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 499

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 141/332 (42%), Gaps = 54/332 (16%)

Query: 5   RTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RT+S  DL VS  G F           V ++G +   R  G   F  I+D +G  Q+   
Sbjct: 37  RTNSTTDL-VSLYGEFSKEELEEKEITVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVR 95

Query: 54  PDSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
            D+     +E+  +     ++ I+G V             T   ELS + I    + + L
Sbjct: 96  KDTVGDEEYELFTTADLGDLVGIEGKVFK-----------TNVGELSVKAIGFTLLTKSL 144

Query: 111 -PLP--VFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFI 162
            PLP    G ++  +  R++ R+LDL      R+T     V R++II  MR  +    ++
Sbjct: 145 RPLPDKYHGLKDVEQ--RYRQRYLDLITSMESRETF----VTRSKIIREMRRYLDDNGYL 198

Query: 163 ECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           E  TP++ A +    AR F           Y +  A + + + L+  G ++ ++I   FR
Sbjct: 199 EVETPMMHAIAGGASARPFTTHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFR 257

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN--------- 272
           +E   +   P EF  +++  ++ + +DI+   EN++  + ++     T+           
Sbjct: 258 NEGVSTRHNP-EFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEINLEP 316

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            + R+   DAI+++     D  NP+ +    E
Sbjct: 317 EWTRLHMVDAIKQHSG--ADFWNPMSVEEARE 346



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|150025270|ref|YP_001296096.1| lysyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149771811|emb|CAL43285.1| Lysine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 563

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 19/253 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V L+G +  VR  G   F +++D  G  Q+  N D  C    K++ ++    +  L 
Sbjct: 46  GKKVTLAGRLMSVRDQGKASFAELQDSQGRVQLYFNRDVICEGDDKTLYNQVFKKLTDLG 105

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEE----LPLPVFGER-------EYPESIRF 126
                E     + T Q+     ++   +   +    LPLP   E          PE +R+
Sbjct: 106 DFIGVE---GELFTTQVGAKCIRVSNFTFLSKTLRPLPLPKTDEEGNIHDAFNDPE-LRY 161

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   K + VKRT++  +MR       ++E  TP+L + +    AR F+   
Sbjct: 162 RMRYVDLVVNPQVKEVFVKRTKLFTAMRNFFNESGYMEVETPVLQSIAGGAAARPFITHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ 
Sbjct: 222 NSLDMPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYK 279

Query: 245 EQDDILNTMENVL 257
           + + ++   EN+L
Sbjct: 280 DYNWMMTFAENLL 292



 Score = 42.4 bits (98), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L    +++EV  FP
Sbjct: 456 RALEYGMPPTSGMGIGMDRLIMFLTNNASIQEVLFFP 492


>gi|118444104|ref|YP_877316.1| asparaginyl-tRNA synthetase [Clostridium novyi NT]
 gi|166231662|sp|A0PY64|SYN_CLONN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|118134560|gb|ABK61604.1| asparaginyl-tRNA synthetase [Clostridium novyi NT]
          Length = 463

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 129/324 (39%), Gaps = 55/324 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGW+  +R      F+++ D   +   QVV   +   F EI+K   S  +   
Sbjct: 17  AGKEVKISGWIRTLRASNKFGFIEVNDGSFFKNIQVVFGAELENFKEISKYAISSSISVE 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             +V++  A+           E+ A+K+ +L    +   P+  +R   E +R       L
Sbjct: 77  GEVVITEGAKQ--------PFEIHAKKV-VLEGKSDADYPLQKKRHTFEYLR---SIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGA--------RDFLVP 183
           R  +   + V R R + +       ++  F+   TPI+T S  EGA         D   P
Sbjct: 125 RPRSNAFSAVFRVRSLAAYAIHKFFQDQGFVYVHTPIITGSDCEGAGEMFRVTTLDMENP 184

Query: 184 SRVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            +  +G+      F+   A      Q +  + A  F   +   P FR E+  + R   EF
Sbjct: 185 PKDEKGNVDYKEDFFGKQANLTVSGQLEAEIYALAFRNVYTFGPTFRAENSNTARHASEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNN 273
           + ++ EM+F E  D ++  E +++ +            EF N            N V+++
Sbjct: 245 WMIEPEMAFAELKDYMDVAEQMVKYIINYVRENAPEEMEFFNKFIDKGLLERLDNVVNSD 304

Query: 274 FLRICYDDAIRRYGTDKPDLRNPI 297
           F RI Y +A+        +   P+
Sbjct: 305 FARISYTEAVEILQKSGAEFEYPV 328


>gi|50293427|ref|XP_449125.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528438|emb|CAG62095.1| unnamed protein product [Candida glabrata]
          Length = 467

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 125/303 (41%), Gaps = 58/303 (19%)

Query: 23  LSGWVHRVRPHGGIIFLDIRD---HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           ++GWV  VR    + F+D+ D   +  +  V+ NP  +   + + +++   + +D  ++ 
Sbjct: 29  VNGWVRSVRLMKKVAFVDLYDGSSNKDVKIVIKNPQESS--LVRHLKTGQCISVDSPLL- 85

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YP-----ESIRFKYRFLD 132
                    I  G      Q  E+L       L + G+ E  YP      S+ F      
Sbjct: 86  --------KITQGS---RIQPFELLVEDSVKDLKLLGDVETNYPLQKKSHSLEFLRTLPT 134

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMI-----AENFIECSTPILTASSPEGA-RDFLVPSRV 186
           L+  +L    + R R  + M    I      ENF++ S PI T +  EGA   F V S V
Sbjct: 135 LKHRSLFYGSILRFR--SHMEEYAINFFNKQENFLKVSPPIFTTNDCEGAGEQFEVKSSV 192

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            +     L  + Q + ++L +      + ++PCFR E   + R   EF+ L+ EMSF++ 
Sbjct: 193 LENKKAFLTVSTQLHLEIL-SMAIANCWTLSPCFRAEKSATPRHLMEFWMLEAEMSFIDN 251

Query: 247 -DDILNTMENVLRGVFEE-FSNGNTV-----------------------SNNFLRICYDD 281
            D +L+   N L+ +  + + N   +                       S N+ RI Y D
Sbjct: 252 LDQLLDFTRNFLQSMVTQCYENREDLLPDNISTLINKEKILERWQMLRNSENWKRITYTD 311

Query: 282 AIR 284
           AI+
Sbjct: 312 AIQ 314



 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 3/82 (3%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G +R    E +       G++     + +  L +    G+ PHGG   G 
Sbjct: 382 LVPEMGEIIGGSMREDNYESLQYQIKKRGMNNTGELDWYVNLRKQ---GVAPHGGFGLGF 438

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R +  LLG +N+++   FP S
Sbjct: 439 ERFISYLLGIQNIKDTIPFPRS 460


>gi|325294994|ref|YP_004281508.1| Lysyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065442|gb|ADY73449.1| Lysyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 512

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 90/180 (50%), Gaps = 6/180 (3%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ L   +I +L+ +   PLP           R++ R+LDL  +   + I + RT+II
Sbjct: 127 TGELTLETFQITLLTKSLR-PLPEKWHGLTDVEKRYRQRYLDLIVNPQVREIFRTRTKII 185

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R  + ++ F+E  TPIL   +S   A+ F+          Y L  AP+ Y + L+  
Sbjct: 186 KKLREFLDSKGFMEVETPILQPIASGAAAKPFITHYNALDIDVY-LRIAPELYLKRLLVG 244

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE-FSNG 267
           GF+R +++   FR+E   +   P EF  ++  M++ + +D++   E +   + +E F  G
Sbjct: 245 GFERVYELGKNFRNEGISTRHNP-EFTMVEFYMAYADYNDLMELTEELFEYLLDEIFGKG 303



 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G   GIDR+VML     ++REV LFP
Sbjct: 460 ALEYGMPPTAGEGIGIDRLVMLFTDKDSIREVLLFP 495


>gi|304311880|ref|YP_003811478.1| Lysyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301797613|emb|CBL45834.1| Lysyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 500

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 33/273 (12%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGLVMSRSAETINANIITGQ 93
           FL I+D  G  Q+  N      E+   ++S W    ++ + G ++ RS +        G+
Sbjct: 81  FLVIQDMTGKIQLYVNRQVLAPEVLDDIKS-WDLGDIVGVKG-ILHRSNK--------GE 130

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSM 152
           + +   +  +L V    PLP   +    + +R++ R++DL  +   +N  + R++ ++ +
Sbjct: 131 LYVDMAEAHLL-VKSLRPLPDKFKGLSDQEMRYRQRYVDLIVNEEVRNTFRVRSQTVDYI 189

Query: 153 RCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF 210
           R  +   +F+E  TP++    P GA  R F+          Y L  AP+ + + L+  GF
Sbjct: 190 RNYLKQRDFLEVETPMMQVI-PGGATARPFVTFHNALDIDLY-LRIAPELFLKRLVVGGF 247

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
           +R F+I   FR+E   +   P EF  L+   ++ +  D+++  E +LRG+ E       V
Sbjct: 248 ERVFEINRNFRNEGLSTRHNP-EFTMLEFYQAYADYRDLMDLTEEMLRGLAETVLGSTQV 306

Query: 271 ---------SNNFLRICYDDAIRRYGTDKPDLR 294
                       F R+   +AI  +    PDLR
Sbjct: 307 HYQGDVYDFGKPFRRMTVVEAILHFN---PDLR 336



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EIA+G    + SE   + F     SK+  ++    F   Y  A + G+PP 
Sbjct: 408 RFEFFVGGREIANGFSELNDSEDQAERFQKQVESKDAGDDEAMHFDQDYITALEYGLPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTDSPSIRDVILFP 494


>gi|284990815|ref|YP_003409369.1| lysyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284064060|gb|ADB74998.1| lysyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 1132

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPH 536
           +++L+  GFE+ +     +     L AF     +K   +   G +     RA +CGMP  
Sbjct: 408 RFELIVAGFELCNAYSEQNDPVEQLAAFEAEARAKSHGDPEAGDVDTDYVRALECGMPCT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG+  GIDR+VMLL G  ++REV LFP
Sbjct: 468 GGLGIGIDRLVMLLAGVDSIREVILFP 494



 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 21/244 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQV-----VANPDSACFEIAKSVRSEWVLCIDG 75
           VR++G V  +R  G + F  +RD  G  Q+     V  P+    E     R +W+   +G
Sbjct: 63  VRVAGRVELIRRQGWLTFATLRDRTGAVQLYVDSSVLGPERHA-EFDDVDRGDWI-GAEG 120

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            VM+            G++ +  +   +L  A   P P        E+ R++ R++DL  
Sbjct: 121 TVMTTR---------RGELSVCVEDFAVLGKALHAPPPEHAGLSDVET-RYRQRYVDLEV 170

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193
           +   + + + R   + ++R  +   +F E   P+L T      AR F+  S       Y 
Sbjct: 171 NERTRQVFRIRHAAVRAIRRHLEDRDFTEVEGPVLQTIQGGASARPFVTHSNALDLDLY- 229

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  A + + + L+  G +R F+I   FR+E   +   P EF  L+   +F +  D++   
Sbjct: 230 LRIALELHLKRLIVGGLERVFEIGRVFRNEGVDTRHNP-EFTLLEAYQAFGDITDMMELT 288

Query: 254 ENVL 257
           E ++
Sbjct: 289 EGLV 292


>gi|119493136|ref|ZP_01624042.1| asparaginyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119452790|gb|EAW33966.1| asparaginyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 463

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 121/306 (39%), Gaps = 55/306 (17%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLVMS 79
           + GWV   R      F+++ D   +   QVV N D   ++ I K + +   + + G ++ 
Sbjct: 21  VQGWVRTKREFKEFAFVEVNDGSAMANLQVVLNLDLENYQNILKQLNTGASVEVVGTLVE 80

Query: 80  RSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
             A+        GQ +EL A+ + +   A+     +  +R    S  F      LR  T 
Sbjct: 81  SPAK--------GQRVELKAESVIVYGDADPETYVLQKKRH---SFEFLRTIAHLRARTN 129

Query: 139 HKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVN--------- 187
               V R R   S       +   F+   TPI+TAS  EGA +    + ++         
Sbjct: 130 TYGAVFRVRNACSAAVHQFFQERGFLWIHTPIITASDCEGAGEMFGVTNLDFKNLPLTES 189

Query: 188 -----QGSFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+  P       Q +  +MA  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 190 KEVDFSRDFFGKPTFLTVSGQLQAEIMALAFGNVYTFGPTFRAENSNTSRHLAEFWMIEP 249

Query: 240 EMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRIC 278
           EM+F + +  ++  E+ L+ +F+          EF N            N ++N F R+ 
Sbjct: 250 EMAFCDLEGNMDLAEDFLKYIFKFVLEKCPEDMEFFNKRIDKTVLETADNIINNQFERLT 309

Query: 279 YDDAIR 284
           Y DAI+
Sbjct: 310 YTDAIK 315


>gi|254516796|ref|ZP_05128854.1| asparaginyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219674301|gb|EED30669.1| asparaginyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 465

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 116/313 (37%), Gaps = 53/313 (16%)

Query: 16  DVGSFVRLSGWVHRVR-PHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLC 72
           D G  V + GW+   R    GI FL I D   +   Q V   D   +E      SE +  
Sbjct: 16  DTGGEVAVRGWLRSKRDSKAGISFLAIHDGSSFDAIQAVVPADLDNYE------SEVLQL 69

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFL 131
             G  +      + +     Q+E+ A ++ +L   E+    PV  +R   E +R +    
Sbjct: 70  TTGCSVELRGTLVPSQGKGQQVEIQASELRVLGWVEDPETYPVAKKRHTFEYLRTQAH-- 127

Query: 132 DLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            LR  T     + R R  + N++        F   +TPI+T S  EGA +    S ++  
Sbjct: 128 -LRPRTNTFGAITRVRHCLANAIHSYFHDNGFYWVNTPIITGSDCEGAGELFRVSTLDMN 186

Query: 190 SFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPG 232
           +          Y Q        L  SG            + +   P FR E+  + R   
Sbjct: 187 NIPRAADGSVDYGQDFFGGDAYLTVSGQLAVESYCLSMSKVYTFGPTFRAENSNTSRHLA 246

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVS 271
           EF+ ++ E++F +  D  +  E++L+ VF    N                        V 
Sbjct: 247 EFWMIEPEVAFADLADNADLAESLLKHVFGRVLNECEDDLAFFNQRIDDTVLTRLAAMVD 306

Query: 272 NNFLRICYDDAIR 284
            NF R+ Y +AI+
Sbjct: 307 QNFERMDYSEAIK 319


>gi|218133838|ref|ZP_03462642.1| hypothetical protein BACPEC_01727 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991213|gb|EEC57219.1| hypothetical protein BACPEC_01727 [Bacteroides pectinophilus ATCC
           43243]
          Length = 645

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 129/287 (44%), Gaps = 34/287 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G + + R  G   F ++ D  G  Q+    DS   E   + +   +    G +
Sbjct: 56  GKQVSIAGRLMQKRVMGKASFGNVADLNGNIQIYVARDSIGEEPYAAFKKFDI----GDI 111

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +    E        G++ +   +I +L+ + + LP    G  +    IR++ R+LDL  +
Sbjct: 112 VGVKGEVFRTQ--KGEMSIHVSEITLLTKSLQVLPEKFHGLTDT--EIRYRQRYLDLIMN 167

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             +    VKR++II  +R  +   +F+E  TP+L +++   A      +R  +  + AL 
Sbjct: 168 PEVKTTFVKRSQIIKEIRNFLDGRDFMEVETPMLVSNAGGAA------ARPFETHYNALD 221

Query: 196 Q------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   +
Sbjct: 222 EDVKLRISLELYLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYYGM 280

Query: 250 LNTMENVLRGVFEEFSNGNT----------VSNNFLRICYDDAIRRY 286
           +   E++ R V E+  NG T           S  F RI   DA+++Y
Sbjct: 281 MELAESLYRTVCEKV-NGTTKVKYGDVEIDFSKPFERITMLDAVKKY 326



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 27/41 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A   GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++ 
Sbjct: 453 ALAYGMPPTGGIGFGIDRMVMLLTDSAAIRDVLLFPTMKSL 493


>gi|89897698|ref|YP_521185.1| asparaginyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|219670847|ref|YP_002461282.1| asparaginyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|123091599|sp|Q24MK1|SYN_DESHY RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|89337146|dbj|BAE86741.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219541107|gb|ACL22846.1| asparaginyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 463

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           +++SGWV  +R      F++I D   +   QVV   D   FE    V +   L I GL++
Sbjct: 21  LQISGWVRTLRVSKSFGFIEINDGSFFKGIQVVFEEDLNNFEEIAKVATGSSLIIKGLLV 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                           EL AQ I ++  A     P+  +R   E +R     L  R +T 
Sbjct: 81  ESPG-------AKQPFELKAQSI-MIEGACSGDYPLQKKRHSFEYLR-TIAHLRPRTNTF 131

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                 R+ +  ++      + F+   TPI+T S  EGA +     RV      ALP+  
Sbjct: 132 AAVFRVRSLVAYAIHKFFQDKGFVYIHTPIITGSDAEGAGEMF---RVTTLDLDALPRTE 188

Query: 199 Q--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +                    Q         F   +   P FR E+  + R   EF+ ++
Sbjct: 189 EGRIDYAKDFFGKETNLTVSGQLNAETYCMAFRNVYTFGPTFRAENSNTARHAAEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVLR--------------GVFEEFSN-------GNTVSNNFLRI 277
            E++F +  D +   E +++                F EF +        N V+++F R+
Sbjct: 249 PEIAFADLQDDMELAEEMMKYLISYVLEHAPEEMAFFNEFVDKTLFDRLDNIVNSDFGRL 308

Query: 278 CYDDAIRRYGTDKPDLRNPI 297
            Y +AI     +K     P+
Sbjct: 309 TYTEAIEILQKEKERFEFPV 328


>gi|323698049|ref|ZP_08109961.1| lysyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323457981|gb|EGB13846.1| lysyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 502

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 125/288 (43%), Gaps = 31/288 (10%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G V   R  G + F  ++D  G  QV A  D      +++ K      ++ + G +  
Sbjct: 67  IAGRVVSYRSFGKVTFFHMQDRSGNIQVYAARDELGPDEYQLFKKTDIGDIVGVTGSLFR 126

Query: 80  RSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                      TG++ +  +  ++++ +   LP    G ++     R++ R++DL     
Sbjct: 127 TK---------TGELTVKTRHFQLVTKSMRPLPEKYHGLKDV--ETRYRQRYVDLIVTPR 175

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALP 195
            K I + RT II  +R  +  + F+E  TP++ A  P GA  + F           Y + 
Sbjct: 176 TKEIFQARTAIIRELRNILDEKGFMEVETPMMQAI-PGGATAKPFETHHNALDMKLY-MR 233

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF+R ++I   FR+E   +   P EF  L+   ++ +  D+++  E 
Sbjct: 234 IAPELYLKRLLVGGFERVYEINRNFRNEGMDTQHNP-EFTMLEFYWAYADFMDLMDLTEE 292

Query: 256 VLRGVFEEFSNGNTVSNN----------FLRICYDDAIRRYGTDKPDL 293
           +   + E+ +    V             + R+ + +++ + G   PD+
Sbjct: 293 IFSRIAEKVTGSTVVPYQGEMIDLTVGAWTRMPFHESLEKIGGVSPDV 340



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL  + ++REV LFP+
Sbjct: 459 RALEYGMPPAAGQGIGIDRLVMLLTDSASIREVILFPL 496


>gi|319957389|ref|YP_004168652.1| lysyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419793|gb|ADV46903.1| lysyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 520

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 10/243 (4%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           RL+G +  +R  G   F  + D  G+ Q+  N D         ++   ++ +  +V    
Sbjct: 62  RLTGRIKFIRIMGKAAFAKLEDSEGLVQIYYNRDDLPEGYYNKIKK--LIEVGDIV---E 116

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
           AE       TG+I L    + I+S A   PLP        + IR++ R+LD+  +   K 
Sbjct: 117 AEGFPFVTRTGEITLHCTDLRIVSKAVH-PLPEKFHGLTDQEIRYRQRYLDMIMNPEVKK 175

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYALPQAPQ 199
             K R+RI++ +R     + F+E  TP++    P GA      +R N  G    L  AP+
Sbjct: 176 TFKLRSRIVSLVRRFFEEKGFLEVETPMM-HPIPGGANARPFVTRHNALGVDRYLRIAPE 234

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G +  F+I   FR+E       P EF  ++   ++   +D++   E +   
Sbjct: 235 LYLKRLIVGGMEAVFEINRNFRNEGMDHTHNP-EFTMIEYYWAWHTYEDLMRLTEELFDY 293

Query: 260 VFE 262
           +FE
Sbjct: 294 LFE 296



 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 23/37 (62%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA   GM P  G   GIDR+VMLL    ++R+V LFP
Sbjct: 456 RALSYGMAPTAGEGIGIDRLVMLLTNQHSIRDVLLFP 492


>gi|120601052|ref|YP_965452.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|166231664|sp|A1V9B8|SYN_DESVV RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|120561281|gb|ABM27025.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 461

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 108/279 (38%), Gaps = 36/279 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L  +     +RL GWV   R   G  FL+I D   +  + A  D      A  
Sbjct: 3   RTQIVDALAATAPQPVIRLCGWVRTRRDAKGFSFLEINDGSCLANIQAIVDEGIPAYANI 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITG-----QIELSAQKIEILSVAEELPLPVFGERE 119
                     G V + +A  I   ++       + E+  Q + +L  A+    P+  +R 
Sbjct: 63  ----------GAVSTGAAVDITGELVESPGKGQKWEVRVQTLTLLGAADAETYPLQKKRH 112

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R     L  R +        R+    ++        F    TPILT S  EGA +
Sbjct: 113 SDEFLR-SIAHLRARTNKYGAAFRIRSEAAFAIHEFYRERGFFYVHTPILTGSDCEGAGE 171

Query: 180 -FLVPSRVNQGSFYALPQAPQQYK--------------QL---LMASGFDRYFQIAPCFR 221
            F V +   +GS    P +  +Y+              QL    +A G  + +   P FR
Sbjct: 172 MFRVTTLPVEGS--PTPASGNRYENDFFGKECNLTVSGQLEAETLALGLGKVYTFGPTFR 229

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            E+  + R   EF+ ++ E++F + ++ +N  E++ R V
Sbjct: 230 AENSNTPRHAAEFWMIEPEVAFADLEEDMNLAEDMTRTV 268


>gi|115453943|ref|NP_001050572.1| Os03g0586800 [Oryza sativa Japonica Group]
 gi|55583785|sp|Q6F2U9|SYK_ORYSJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|50399950|gb|AAT76338.1| putative Lysyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|108709560|gb|ABF97355.1| Lysyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549043|dbj|BAF12486.1| Os03g0586800 [Oryza sativa Japonica Group]
          Length = 602

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 77/152 (50%), Gaps = 4/152 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R+LDL  +   ++I K R+++++ +R  +   +F+E  TP++   +    AR 
Sbjct: 250 QETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDGLDFLEVETPMMNMIAGGAAARP 309

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  AP+ Y + L+  G DR ++I   FR+E       P EF   + 
Sbjct: 310 FVTHHNELNMRLY-MRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTTCEF 367

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
            M++ + +D++   E +L G+ +E + G  + 
Sbjct: 368 YMAYADYNDLIELTETMLSGMVKELTGGYKIK 399



 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ MLL  ++N++EV LFP
Sbjct: 561 ALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFP 596


>gi|281207090|gb|EFA81274.1| asparagine-tRNA ligase [Polysphondylium pallidum PN500]
          Length = 663

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 108/286 (37%), Gaps = 20/286 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           D+  +   + V + GW+H VR    I F+++RD  G  Q V   D     I   ++ E  
Sbjct: 234 DISPAIANTRVHIKGWIHHVRSQRKIAFIELRDGTGFLQCVLQGDLVHPSIVDDLKREAT 293

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +    A+      +  Q++        L  A  L L      +         R 
Sbjct: 294 VSLIGTLTLPPADKHCPQGVELQVDYWK-----LIGASHLDLEGIINIDSNVDQMLDQRH 348

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           + LR       +  R+  + + R       + E S P L  +  EG  +        Q +
Sbjct: 349 IVLRGSRASSIMKLRSITMKAFRDHYFENGYYEVSPPTLVNTFCEGGSELFTLDYFGQPA 408

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y + ++    D  F +A  +R E  ++ R   EF  L+ E  F+  +D+L
Sbjct: 409 Y--LTQSSQLYLETMIPVAGD-VFCMAQSYRAELSKTRRHLAEFTHLEAECPFITFEDLL 465

Query: 251 NTMENVLRGVFEEF------------SNGNTVSNNFLRICYDDAIR 284
           + +E ++  V E               N       F R+ Y D I+
Sbjct: 466 DRIEYLVCDVAERIFKIDKDLLLSVNPNAKVPKRPFKRMDYADGIK 511



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G +R      ++ A+   G+      +++       + G  PHGG   
Sbjct: 578 DLLMPGVGEIVGGSMRISDYTQLMDAYKKEGLDP----SQYYWFTDQRKYGTTPHGGYGL 633

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G++R +   LG +++R V L+P  +  C
Sbjct: 634 GVERFLTWFLGEEHIRNVCLYPRYRERC 661


>gi|291556890|emb|CBL34007.1| Lysyl-tRNA synthetase (class II) [Eubacterium siraeum V10Sc8a]
          Length = 503

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 25/267 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW- 69
           +L   DV    R++ W    R  G   F+DIRD  G  QV    D    +  K  + +W 
Sbjct: 62  ELEEKDVMIAGRITSW----RDMGKANFIDIRDDSGRMQVYVRIDDIGEDNFKEFK-KWD 116

Query: 70  ---VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-GEREYPESIR 125
              ++ + G V              G+I + A+ I++LS +       + G ++  E  R
Sbjct: 117 LGDIVGVSGFVFKTRR---------GEISVHAKSIKLLSKSLLPLPEKWHGLKDKEE--R 165

Query: 126 FKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP 183
           ++ R+LDL  +  +    VKR+ I+  +R  + +  ++E  TP+L T      AR F+  
Sbjct: 166 YRKRYLDLIANPEIKDTFVKRSMILREIRSFLDSRGYLEVDTPVLHTLEIGAAARPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L    + Y + L+  GFDR +++   FR+E   +   P EF  ++M  ++
Sbjct: 226 HNALDIDMY-LRIETELYLKRLIVGGFDRVYEVGRIFRNEGMDATHNP-EFTSIEMYQAY 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTV 270
            +   +++ +E + R V  +    +TV
Sbjct: 284 TDYYGMMDLIEEMYRTVALKVCGTDTV 310



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 8/58 (13%)

Query: 514 SKEVVENRFGG--------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +K+V+E R  G           A + G+PP GG+  G+DR VMLL  + ++R+V LFP
Sbjct: 439 TKQVMEKRKQGANAQIDEDFLTALEYGLPPTGGLGMGLDRFVMLLTDSASIRDVLLFP 496


>gi|313115333|ref|ZP_07800808.1| lysyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622364|gb|EFQ05844.1| lysyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 503

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 19/250 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +D G  V L+G +   R  G   F  +RD  G  Q+    D    E+ +   + +     
Sbjct: 61  TDSGKTVALAGRMMSKRVMGKASFAHLRDDKGDIQLYVRRD----ELGEEPYAAFKKLDV 116

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL 133
           G ++    E       TG  ELS +  E+  +A+ L PLP          +R++ R++DL
Sbjct: 117 GDIIGVKGEVFRTK--TG--ELSVRATELTLLAKSLRPLPEKFHGLTDTEMRYRQRYVDL 172

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV-PSRVNQGS 190
             +   K+  VKR++I+  +R  +  + F+E  TPILT       AR F    + +N   
Sbjct: 173 IANPEVKDTFVKRSQILKEIRAYLDEKGFLEVDTPILTPFEIGASARPFYTHHNSLNMD- 231

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDD 248
              L    + Y + L+  G DR +++   FR+E  DP+ +    EF  +++  +F +   
Sbjct: 232 -MVLRIETELYLKRLIVGGMDRVYEVGRIFRNEGMDPKHN---PEFTSIELYQAFTDFHG 287

Query: 249 ILNTMENVLR 258
           +++ +E + +
Sbjct: 288 MMDLVEELYK 297



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 461 ALEYGLPPTGGLGFGVDRLVMLLTDSASIRDVLLFP 496


>gi|47570201|ref|ZP_00240855.1| lysyl-tRNA synthetase [Bacillus cereus G9241]
 gi|228983332|ref|ZP_04143546.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|47553145|gb|EAL11542.1| lysyl-tRNA synthetase [Bacillus cereus G9241]
 gi|228776446|gb|EEM24798.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 499

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/303 (21%), Positives = 131/303 (43%), Gaps = 38/303 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  I+D +G  Q+    D+     +E+ K+     ++ I+G +
Sbjct: 63  VSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKTADLGDLVGIEGKI 122

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--- 133
              +          G++ + A    +L+ +   LP    G ++  +  R++ R+LDL   
Sbjct: 123 FKTNV---------GELSVKATGFTLLTKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITS 171

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
              R+T     V R++II  MR  +    ++E  TP++ A +    AR F+         
Sbjct: 172 MESRETF----VTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHHNALDME 227

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI+
Sbjct: 228 LY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDIM 285

Query: 251 NTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
              EN++  + ++     T+            + R+   DAI+ +     D  NP+ +  
Sbjct: 286 KLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWTRLHMVDAIKEHSG--ADFWNPMSVEE 343

Query: 302 VTE 304
             E
Sbjct: 344 ARE 346



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|189502577|ref|YP_001958294.1| lysyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|189498018|gb|ACE06565.1| hypothetical protein Aasi_1242 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 502

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 77/340 (22%), Positives = 137/340 (40%), Gaps = 38/340 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLV 77
           + ++G +   R  G   F++++D  G  Q+  + D+ C    KS  +   + +L I  L+
Sbjct: 55  ISIAGRIMGRRIMGAASFVELQDASGKIQLYVHRDTLCPGDDKSFYNTVFKKLLDIGDLI 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--------PESIRFKYR 129
                E        G+I +   K+ +LS A   PLPV  E +         PE  R++ R
Sbjct: 115 ---GIEGYVFTTQVGEISIHVNKLTLLSKALR-PLPVVKEDDKQVYDAFTDPEQ-RYRQR 169

Query: 130 FLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL      ++I  KRT++I ++R  + ++ + E  TPIL        AR F       
Sbjct: 170 YVDLLVTPTTRSIFQKRTQMIQAIRQYLNSQGYDEVETPILQPLYGGASARPFKTHHNTL 229

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
             S Y L  A + Y + L+  G++  ++ A  FR+E       P EF  L++ +++ +  
Sbjct: 230 DMSLY-LRIANELYLKRLIVGGYEGVYEFAKDFRNEGMSRFHNP-EFTMLELYVAYKDYK 287

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTE 304
            ++N  E +L  V         V                GT   D + P     M    +
Sbjct: 288 WMMNLTEELLEQVALHLYGTTAVP--------------VGTHTIDFKRPWKRFTMFEAIQ 333

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           HF   +     + L +       ++P +   G     D +
Sbjct: 334 HFTGIDISQMEE-LELRKAAATLSVPLEASAGKAKIIDEI 372



 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA   GMPP  G+  GIDR+ M++  A +++EV  FP
Sbjct: 460 RALSYGMPPTAGLGIGIDRLAMIMTNAPSIQEVIFFP 496


>gi|72387914|ref|XP_844381.1| asparaginyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62358589|gb|AAX79049.1| asparaginyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70800914|gb|AAZ10822.1| asparaginyl-tRNA synthetase, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 746

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 101/252 (40%), Gaps = 13/252 (5%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           GDL     G  V + GW HRVR    I F+ +RD  G  QVV   ++  F        E 
Sbjct: 307 GDLPKCKEGEIVHVIGWAHRVRHQSRISFVVLRDGSGYIQVVFGGETEPF------HRET 360

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L I G +     E      +    EL  ++  I+  ++     V      P+ +    R
Sbjct: 361 SLAIRGRL---KHEPKAKAELQPPYELHVEEYAIIGNSDGSIENVITAESSPDKL-LDDR 416

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L +R       +  R  +I + R    ++   E + P L  +  EG         +  G
Sbjct: 417 HLVIRGTYGSTTLKVRHELIRAFREYFWSKGMYEVTPPTLVGTQCEGGSTLF--DVMYYG 474

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L Q+ Q Y +   AS  D Y  ++  +R E  ++ R   E+  L++E +    +++
Sbjct: 475 KKAYLTQSSQLYLEACTASLGDVYCLLS-SYRAEKSKTKRHLSEYTHLEVEYAVCNFEEM 533

Query: 250 LNTMENVLRGVF 261
           L  +E+++  VF
Sbjct: 534 LTYIEDLIVSVF 545



 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D++  G  E+  G +R    + +++A+   G+  EV    +       + G  PHGG   
Sbjct: 661 DVLAPGIGEVVGGSMRMWDYDELMEAYKREGLDPEV----YYWYTEQRKYGSTPHGGFGL 716

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G++R+++ LL   +VR+  LFP     C
Sbjct: 717 GLERLLVWLLDLDSVRDACLFPRYMGRC 744


>gi|323343343|ref|ZP_08083570.1| asparagine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323095162|gb|EFZ37736.1| asparagine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 464

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/278 (20%), Positives = 112/278 (40%), Gaps = 38/278 (13%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L  +D G+ V + GWV   R    + F+ + D   I   Q+V +P     E  
Sbjct: 3   RTKIVDVLRSTDFGNNVNVKGWVRTHRSSKAVDFIALNDGSTIKNVQIVVDPSKFDAETL 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGER-EY 120
           K++ +       G  ++   E + +      +E+  + +EI      + P+   G+  EY
Sbjct: 63  KNITT-------GSCLNVVGELVESQGKGQTVEIQCKTLEIYGPCGSDYPMQKKGQTFEY 115

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
                 ++  + LR +T       R  +  ++        F    TPI+TAS  EGA + 
Sbjct: 116 MR----QHAHMRLRTNTFGAVFRIRHNMAIAIHRYFHEHGFFYFHTPIITASDAEGAGEM 171

Query: 181 LVPSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCF 220
               +V   + Y L +                       Q +  L A+   + +   P F
Sbjct: 172 F---QVTTKNLYDLKKDENGKIIYDDDFFGKMTSLTVSGQLEGELGATALGQIYTFGPTF 228

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           R E+  + R   EF+ ++ E++F++ +D+++  E+ ++
Sbjct: 229 RAENSNTPRHLAEFWMIEPEVAFIDLNDLMDLEEDFIK 266



 Score = 38.1 bits (87), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 14/42 (33%), Positives = 24/42 (57%)

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G  PHGG   G +R+++ + G +N+R+V  FP +    D 
Sbjct: 423 KYGTCPHGGFGLGFERLILFVTGMQNIRDVIPFPRTPKSADF 464


>gi|307200232|gb|EFN80526.1| Lysyl-tRNA synthetase [Harpegnathos saltator]
          Length = 584

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 37/266 (13%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           G+  V +V S   ++G VH +R     +IF D+R      QV+AN        A+  R E
Sbjct: 103 GETLVDEVHS---IAGRVHSIRGASAKLIFFDLRGEGVKVQVMAN--------ARIYRDE 151

Query: 69  WVLCIDGLVMSRSAETINANII----------TGQIELSAQKIEILS-VAEELPLPVFGE 117
                D   + R       +II           G+  +    I +LS     LP   FG 
Sbjct: 152 EKFATDTSKIRR------GDIIGVVGNPGKSKKGEFSIMPHSITLLSPCLHMLPHLHFGL 205

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
           ++  +  R++ R+LDL  +   + I   R +II  +R  +    F+E  TP++   +   
Sbjct: 206 KD--KETRYRQRYLDLIINNRVRQIFHIRAKIIAYIRSYLDKLGFLEVETPMMNMIAGGA 263

Query: 176 GARDFLV-PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            A+ F+   + +N   F  +  AP+ Y ++L+  G DR ++I   FR+E       P EF
Sbjct: 264 TAKPFVTYHNELNMELFMRI--APELYHKMLVVGGIDRVYEIGRQFRNEGIDMTHNP-EF 320

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGV 260
              +  M++ + +D+++  E+++  +
Sbjct: 321 TTCEFYMAYADYNDLMSLTEDMVSSM 346



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 521 ALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFP 556


>gi|261749371|ref|YP_003257056.1| lysyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
 gi|261497463|gb|ACX83913.1| lysyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
          Length = 518

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 122/271 (45%), Gaps = 39/271 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQV-----------VANPDSACFEIAKSVRSEW 69
           +R++G + R+R  G   F +I+DH G  Q+           +   +S    + K +    
Sbjct: 66  IRIAGRLIRLRILGKASFGEIKDHTGRIQIYFKKNHFDSEKIGKEESYNILLKKLIDIGD 125

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP---------VFGEREY 120
           ++ + G +       I  ++         QK+ +LS +   PLP         ++     
Sbjct: 126 IIGVQGFLFKTKMNEITVHV---------QKLTLLSKSLR-PLPQVKVDKNKKIYDAFSN 175

Query: 121 PESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--A 177
           PE  R++ R++DL   D + +  +KRT II  +R  +  + ++E  TPIL  S P G  A
Sbjct: 176 PEQ-RYRMRYVDLIVNDHVKEIFLKRTHIIRKIRNFLDDKGYLEVDTPIL-QSIPGGAVA 233

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQ 236
           R F V    + G    L  A + Y + L+  GF   ++ +  FR+E    DRL   EF  
Sbjct: 234 RPF-VTYHNSLGIPLYLRIANELYLKRLIIGGFHGVYEFSKNFRNEG--MDRLHNPEFTV 290

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
           L++ +++ +   ++N  E +L+ +F +    
Sbjct: 291 LELYVAYKDYYWMMNFTEKLLKCIFHQMQKN 321



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF--GGLYRAFQCGMPPHGG 538
           +++L+ NG EIA+     +     L          E  E+ F      RA + GMPP  G
Sbjct: 425 RFELIVNGQEIANAYSELNDPIDQLDRLREQIKFSEKKESMFLDKDFIRALEFGMPPTAG 484

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           I  GIDR+VML     +++EV LFP
Sbjct: 485 IGIGIDRLVMLFTKQNSIQEVLLFP 509


>gi|237743097|ref|ZP_04573578.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229433393|gb|EEO43605.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 461

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/321 (21%), Positives = 118/321 (36%), Gaps = 57/321 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV ++R      F+++ D   +   Q+V       F+    +     + + G ++
Sbjct: 19  IELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSISSTIKVKGTLV 78

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                       +GQ +E+ A KIEI   A+ L  P+  +R   E +R K   L  R +T
Sbjct: 79  KSQG--------SGQDLEVKADKIEIFQKAD-LEYPLQNKRHTFEYLRTKAH-LRPRTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+ +  ++       NF+   TPI+T S  EGA +     RV       LP+ 
Sbjct: 129 FSAVFRVRSVLAYALHKFFQENNFVYVHTPIITGSDAEGAGEMF---RVTTLDMNKLPKK 185

Query: 198 PQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                                 Q       + F   +   P FR E   + R   EF+ +
Sbjct: 186 ENGEVDFTKDFFGKSTNLTVSGQLNVETFCAAFRNVYTFGPTFRAEYSNTARHASEFWMV 245

Query: 238 DMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLR 276
           + E++F +    +   E +++ V +          EF N            N ++N F R
Sbjct: 246 EPEIAFADLSANMELAEAMVKFVIKYVMDTCPEEMEFFNSFIEKGLFDKLNNVLNNEFGR 305

Query: 277 ICYDDAIRRYGTDKPDLRNPI 297
           I Y +AI      +     P+
Sbjct: 306 ITYTEAIEILEKSRKKFEFPV 326



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 15/91 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  EI  G  R    E++L+    +G+++E  E      RFG           PH
Sbjct: 376 DLLAPGIGEIIGGSQREDSYEILLKRMKELGLNEEDYEFYLDLRRFGSF---------PH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R++M L G +N+R+V  FP + N
Sbjct: 427 SGYGLGFERMMMYLTGMQNIRDVIPFPRTPN 457


>gi|171913093|ref|ZP_02928563.1| asparaginyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 454

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 123/298 (41%), Gaps = 46/298 (15%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG-LV 77
           V + GWV   R      F+++ D   +   QVVA+   AC  +   V +   + + G LV
Sbjct: 19  VTVQGWVRTRRDSKACTFIELNDGSCLRGLQVVADNSLACAGLYPRVLTGASVRVTGDLV 78

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY-PESIRFKYRFLDLRRD 136
            S   +           E+ A+ +EI  + E     V  ++ + PE +R     L  R +
Sbjct: 79  ASPGGKQA--------FEILAKNVEI--IGESDGTYVLQKKGHTPEFLR-SISHLRPRTN 127

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS------ 190
            L      R+R+  ++      ++F    TPI+T+S  EGA +    + + QG       
Sbjct: 128 LLGSVFRVRSRMAFAIHKFFQEQDFFYVHTPIITSSDCEGAGEMFRVTTLPQGGAAKPEE 187

Query: 191 -FYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE- 245
            F+  P       Q +  + A    + +   P FR E+  + R   EF+ ++ EM+F + 
Sbjct: 188 DFFGKPTFLTVSGQLQGEVFACALSKIYTFGPTFRAENSNTARHAAEFWMIEPEMAFYDL 247

Query: 246 QDDILNTMENV---LRGVFE------EFSNG-----------NTVSNNFLRICYDDAI 283
           Q D+     NV   L+ +FE      EF N            +T+   F R+ Y DA+
Sbjct: 248 QADMGLAEANVKYLLKSLFETCGEELEFFNKFVDTGLIARLQHTLDKPFQRVSYTDAV 305


>gi|254775578|ref|ZP_05217094.1| lysyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 1085

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 23/227 (10%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D    + ++G + R+R  GG++F  +RD  G  QV+   D++  E  ++ 
Sbjct: 631 SHTVAQALDADDQQDITVAGRILRIRDFGGVLFAQLRDWSGEMQVLL--DNSRLERGRTA 688

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-------LPLPVFGER 118
                + +  LV            ++GQ+  S +    L V +         PLP   + 
Sbjct: 689 DFTAAIDLGDLVE-----------VSGQMGFSKKGTRSLIVTDWRMIGKCLRPLPNKWKG 737

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                 R + R++DL  +   + ++  R+ ++ S+R  + A+ FIE  TPIL        
Sbjct: 738 LTDPEARVRTRYVDLAVNPESRELIAARSEVLRSVRQTLFAKGFIEVETPILQQIHGGAT 797

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           AR F+          + L  AP+ Y + L   G +R F++   FR+E
Sbjct: 798 ARPFVTHINTYDMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNE 843



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+A+           R  + E  L A      + E+ E+      +A +
Sbjct: 993  AERWDLVAWGVELATAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAME 1048

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  G+DR+VML+ G +++RE   FP+++
Sbjct: 1049 YAMPPTGGLGMGVDRLVMLITG-RSIRETLPFPLAK 1083


>gi|288905716|ref|YP_003430938.1| lysyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|306831812|ref|ZP_07464968.1| lysine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|325978748|ref|YP_004288464.1| lysyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732442|emb|CBI14014.1| lysyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|304426010|gb|EFM29126.1| lysine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|325178676|emb|CBZ48720.1| lysyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 496

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/277 (20%), Positives = 116/277 (41%), Gaps = 17/277 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + ++     ++G +   R  G + F  I+D  G  Q+    D+     ++I K       
Sbjct: 56  LHEINKTATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRKDAVGDENYQIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L I+G +M             G++ + A  +  LS A   PLP           +++ R+
Sbjct: 116 LGIEGEIMRTD---------MGELTIKATHLTHLSKALR-PLPEKFHGLTDVETKYRKRY 165

Query: 131 LDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           LDL   R++  +  V R++II+ +R  +    F+E  TP+L   +   A    +     Q
Sbjct: 166 LDLISNRESFDR-FVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAARPFITHHNAQ 224

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
                L  A + + + L+  G ++ ++I   FR+E       P EF  +++  ++ +  D
Sbjct: 225 DMDMVLRIALELHLKRLIVGGMEKVYEIGRVFRNEGMDVTHNP-EFTMIELYEAYADFKD 283

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           I++  E +++   +  +    +S     I  D   +R
Sbjct: 284 IMDITEGIIQHASKAVNGDGPISYQGTEIAIDQPFKR 320



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|240280665|gb|EER44169.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 1008

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 6/84 (7%)

Query: 482  YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI--SKEVVENRFGGLYRAFQCGMPPHGGI 539
            YD    G EI SG  R + ++ +  A S  GI  + E  E+  G    AF+ G PPH G 
Sbjct: 921  YDFFMRGEEIMSGAQRINEAKELEAAMSAKGIDPNAEGFEDYIG----AFRQGCPPHAGG 976

Query: 540  AAGIDRIVMLLLGAKNVREVSLFP 563
              G++RIVM  LG  N+R  +LFP
Sbjct: 977  GLGLNRIVMFFLGLPNIRLATLFP 1000



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 32/254 (12%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--LCIDGLV----MSRSAETINANI 89
           + FL +R      Q V    SA  EI++ +  +W+  + ++ +V    + + AE    + 
Sbjct: 569 LAFLMLRQQGKKMQAVV---SASDEISRPM-VKWIGGINVNSIVKVTAIVKKAEIPVTSA 624

Query: 90  ITGQIELSAQKIEILSVAEE-LPLPVF-GEREYPES-----------IRFKYRFLDLRRD 136
               +EL  +K+ +++ A   LP+ V   ER  PES           +  K R LD R  
Sbjct: 625 TVKHLELHIRKVYMVAQASHMLPMQVKDAERPPPESVTEEVESEAPYVTLKTR-LDNRVL 683

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIEC-----STPILTASSPEGARDFLVPSRVNQGSF 191
            L     +    I+S   ++  E  ++      STP LTA++ EG       +   + ++
Sbjct: 684 DLQTEASQAITWISSGVAQLFMEYMLKSGSRWISTPKLTANASEGGAGVFEVTYFKRKAY 743

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDIL 250
            A  Q+PQ YKQ+ +A   +  F+I P FR E+  + R   EF  LD E +F     ++L
Sbjct: 744 LA--QSPQLYKQMCIAGDMESVFEIGPVFRAEESNTHRHLTEFVGLDFEKTFQSHYHEVL 801

Query: 251 NTMENVLRGVFEEF 264
              E++L  +  E 
Sbjct: 802 EFAEDLLVFILSEL 815


>gi|206560552|ref|YP_002231317.1| lysyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|238693118|sp|B4EDB2|SYK_BURCJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|198036594|emb|CAR52491.1| lysyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 508

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 124/289 (42%), Gaps = 32/289 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q    P+    E   + + +W L   G +++ 
Sbjct: 68  VSVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPNDVGAETYDAFK-KWDL---GDIVAA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----RR 135
                  N   G++ +  +++ +LS A   PLP        + +R++ R++DL      R
Sbjct: 124 RGVLFRTN--KGELSVQCKELRLLSKALR-PLPDKFHGLSDQEMRYRQRYVDLIVTPETR 180

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
           DT       RT+ I S+R  M   +F+E  TP+L        A+ F+          + L
Sbjct: 181 DTFRA----RTKTIASIRKFMDNADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMF-L 235

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
             AP+ Y + L+  GF+R F+I   FR+E   PR +    EF  ++   ++ +   +++ 
Sbjct: 236 RIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHN---PEFTMMEFYAAYTDYRWLMDF 292

Query: 253 MENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
            E ++R    +     T+         +  F R+    AI++Y  D  D
Sbjct: 293 TEQLIRQAAIDALGTATIQYQGRELDLAKPFHRLTITQAIQKYAPDYTD 341



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFMTGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|125586971|gb|EAZ27635.1| hypothetical protein OsJ_11579 [Oryza sativa Japonica Group]
          Length = 630

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 77/152 (50%), Gaps = 4/152 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R+LDL  +   ++I K R+++++ +R  +   +F+E  TP++   +    AR 
Sbjct: 250 QETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDGLDFLEVETPMMNMIAGGAAARP 309

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  AP+ Y + L+  G DR ++I   FR+E       P EF   + 
Sbjct: 310 FVTHHNELNMRLY-MRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTTCEF 367

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
            M++ + +D++   E +L G+ +E + G  + 
Sbjct: 368 YMAYADYNDLIELTETMLSGMVKELTGGYKIK 399


>gi|310639546|ref|YP_003944304.1| lysyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309244496|gb|ADO54063.1| Lysyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 508

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 112/245 (45%), Gaps = 11/245 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  I+D  G  Q+    D+       + ++  +L +  +V   
Sbjct: 71  VSIAGRIMAKRVMGKASFAHIQDLSGRIQIYVRQDTVP---EANYKAFGILDLGDIV--- 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLH 139
             + +     TG+  +    IE+LS +   PLP          +R++ R++DL  +  + 
Sbjct: 125 GVKGVLFKTKTGETTIKVLDIEVLSKSL-YPLPEKYHGLKDVELRYRQRYVDLVMNPEVQ 183

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           K  + R+RII SMR  + +  ++E  TP L A +    A+ F+          Y +  A 
Sbjct: 184 KTFITRSRIIQSMRRYLDSLGYLEVETPTLHAIAGGAAAKPFVTHHNALDTQLY-MRIAI 242

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+  G ++ ++I   +R+E   +   P EF  +++  ++ +  DI+   EN++ 
Sbjct: 243 ELHLKRLIVGGMEKVYEIGRVYRNEGVSTRHNP-EFTLIELYEAYADYKDIMQLTENLIA 301

Query: 259 GVFEE 263
            + +E
Sbjct: 302 HIAQE 306



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/41 (56%), Positives = 30/41 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           RA + GMPP GG+  GIDR+VMLL  A ++R+V LFP  +N
Sbjct: 464 RALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPHMRN 504


>gi|237745072|ref|ZP_04575553.1| lysyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|260494850|ref|ZP_05814980.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|229432301|gb|EEO42513.1| lysyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|260198012|gb|EEW95529.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 493

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 19/254 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLCIDGLV 77
           + +G +  +R  G   F  I D  G  Q+    D    E    I K +    ++ I+G +
Sbjct: 57  KTAGRIMSLRGKGKAYFAHIEDQSGKIQIYMKKDELGEEQFDHIVKMLNVGDIVGIEGEL 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                E +   + +  I L A+ +        LP    G  +    IR++ R++DL  + 
Sbjct: 117 FITHTEELTLRVKS--ISLLAKNVR------SLPEKYHGLTDV--EIRYRKRYIDLIMNP 166

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
             ++I +KRT II  +R  +    F+E  TP++        AR F+          Y L 
Sbjct: 167 EVRDIFIKRTEIIKEIRKYLDERGFLEVETPMMHQILGGAAARPFITHHNALNLDLY-LR 225

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + Y + L+  GFD+ +++   FR+E   S R   EF  +++  +  + +D+++  E 
Sbjct: 226 IAVELYLKRLIVGGFDKVYEMGKDFRNEGI-SVRHNPEFTMIELYQAHADFNDMMDIAEG 284

Query: 256 VLRGVFEEFSNGNT 269
           ++  + E+  NG T
Sbjct: 285 MISTICEKI-NGTT 297



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 452 ALEYGMPPTGGMGIGIDRLVMLLTGSPSIRDVILFP 487


>gi|168038837|ref|XP_001771906.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676857|gb|EDQ63335.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 609

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 78/153 (50%), Gaps = 6/153 (3%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R+LDL  ++  +N+ K R+++I  +R  +   +F+E  TP++   +    A+ 
Sbjct: 237 QETRYRQRYLDLMLNSDIRNVFKTRSQVIRYVRRFLDDRDFVEVETPMMNMIAGGAAAKP 296

Query: 180 FLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           F    + +N   F  +  AP+ Y + L+  G DR ++I   FR+E       P EF   +
Sbjct: 297 FKTHHNDLNMDLFMRI--APELYLKELIVGGLDRVYEIGKQFRNEGIDLTHNP-EFTTCE 353

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
              ++ + DD++   E +L G+ +E + G  + 
Sbjct: 354 FYWAYADYDDLMRVTEEMLSGMVKEITGGYKIQ 386



 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 28/45 (62%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
           A + G+PP  G   GIDR  M+L  ++N++EV LFP  +   D++
Sbjct: 553 ALEYGLPPTAGWGMGIDRFTMMLTDSQNIKEVLLFPAMKPHEDVI 597


>gi|325299015|ref|YP_004258932.1| Asparaginyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324318568|gb|ADY36459.1| Asparaginyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 467

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 113/277 (40%), Gaps = 36/277 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F  E+ 
Sbjct: 6   RTKIVDLLKCRDFGTMVNVRGWVRTRRGSKQVSFIALNDGSTINNVQIVVDLANFDEELL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEE-LPLPVFGEREY 120
           K + +   L ++G+++    E++ A    GQ  E+ A++IE+L V +   PL   G    
Sbjct: 66  KQITTGACLSVNGILV----ESVGA----GQAAEIQAREIEVLGVCDNTYPLQKKGH--- 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGAR 178
             S+ F      LR  T     V R R  +  ++        F    TP++TAS  EGA 
Sbjct: 115 --SMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPLITASDCEGAG 172

Query: 179 DFLVPSRVN--------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221
                + +N                 F+    +     QL   L A+     +   P FR
Sbjct: 173 QMFQVTTMNLYDLKKDENGSIIYDNDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            E+  + R   EF+ ++ E++F + +D ++  E  ++
Sbjct: 233 AENSNTPRHLAEFWMIEPEVAFNDINDNMDLAEEFIK 269


>gi|119480319|ref|XP_001260188.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Neosartorya
           fischeri NRRL 181]
 gi|119408342|gb|EAW18291.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Neosartorya
           fischeri NRRL 181]
          Length = 574

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 118/292 (40%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G       G+ VR+ G VHR+R    +IFL + D YG  Q V   +      A ++  E 
Sbjct: 141 GSPETQTAGTRVRVLGRVHRLRVQKDVIFLTLSDGYGYLQCVLTGNLTKTYDAMTLTLET 200

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRF 126
            + I G + +   +    N      EL A    ++  A   +E       +   P+++ +
Sbjct: 201 SMAIHGEMRAVPPKQHAPN----DRELHADFFTVIGRAAGDKEAITTRVAKDADPQTL-Y 255

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR +T    +  R   + + R     +  +E + P +  +  EG          
Sbjct: 256 DNRHLVLRGETSSAVMKVRAACLKAFRQVFEEKRMLEVTPPAMVQTQVEGGSTLFKFDYY 315

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            + ++  L Q+ Q Y +  + S  D  F + P FR E   + R   E+  ++ E+ F+  
Sbjct: 316 GEDAY--LTQSSQLYLETCLPSLGD-VFCVCPSFRAEKSLTRRHLSEYTHIEAELDFITF 372

Query: 247 DDILNTMENVLRGVFE-EFSNGNTV-------------SNNFLRICYDDAIR 284
            D+L+ +E V+  V E   ++  T              S  F R+ Y DAI+
Sbjct: 373 TDLLDHLEEVICRVIELTLADPATAALIKQLNPDFKPPSRPFRRMKYADAIQ 424


>gi|118465579|ref|YP_879834.1| lysyl-tRNA synthetase [Mycobacterium avium 104]
 gi|254773510|ref|ZP_05215026.1| lysyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291]
 gi|118166866|gb|ABK67763.1| lysyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 499

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 17/257 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEW 69
           D    DV   V ++G V   R  G + F  +++  G T QV+ + D    ++ +     W
Sbjct: 54  DTATDDV---VGVAGRVIFARNSGKLCFATLQEGDGTTLQVMVSLD----KVGREALDAW 106

Query: 70  VLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
              +D G ++S     I++    G++ + A    + S +   PLPV   +E  E  R + 
Sbjct: 107 KADVDLGDIVSVHGTLISSR--RGELSVLADSWRMASKSLR-PLPV-AHKEMSEEARVRQ 162

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRV 186
           R++DL      + + + R  +I ++R  +    F+E  TP+L T +    AR F+  S  
Sbjct: 163 RYVDLIVRPQARTVARQRIAVIRAIRNALERRGFLEVETPMLQTLAGGAAARPFVTHSNA 222

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  AP+ + +  +  GFD+ F++   FR+E   S   P EF  L+   ++   
Sbjct: 223 LDIDLY-LRIAPELFLKRCVVGGFDKVFELNRVFRNEGADSTHSP-EFSMLETYQAYGTY 280

Query: 247 DDILNTMENVLRGVFEE 263
           DD       +++ V +E
Sbjct: 281 DDSAVVTRELIQEVADE 297


>gi|227834055|ref|YP_002835762.1| lysyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262183459|ref|ZP_06042880.1| lysyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|227455071|gb|ACP33824.1| lysyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 524

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 116/250 (46%), Gaps = 20/250 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G +  +R  G + F  ++D  G TQV A    A  E+ +   + W   +D G  +S
Sbjct: 79  VAIAGRLIFMRNTGKLCFATLQDGDG-TQVQAMLSLA--EVGEERLAAWKSDVDLGDFIS 135

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEEL-PLPV-FGEREYPESIRFKYRFLDL-RRD 136
                I +     + ELS    E    A+ L PLPV F +    E  R + R+ DL  R+
Sbjct: 136 VRGRVIASR----RGELSVMASEWTMAAKSLRPLPVSFAD--MNEETRVRQRYNDLIVRE 189

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
              KN + R +++ ++R  +  + F+E  TP+L T      AR F+  S       Y L 
Sbjct: 190 EARKNAMTRVKVMRALRNYLEDQGFMEIETPMLQTLHGGAAARPFVTHSNALDIDLY-LR 248

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD----ILN 251
            AP+ + +  +  G DR F+I   FR+E       P EF  L+   ++ + +D    I  
Sbjct: 249 IAPELFLKRAVVGGIDRVFEINRNFRNEGVDRSHSP-EFAMLETYEAWGDYNDCARTIRE 307

Query: 252 TMENVLRGVF 261
           ++++V R VF
Sbjct: 308 SIQSVARAVF 317



 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSN-----VGISKE--VVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        +  + F +      G  +E  V++  F     A + GM
Sbjct: 433 KWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDEEAMVLDEDF---LAAMEQGM 489

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   G+DR++M L G   +RE  LFP+
Sbjct: 490 PPTAGAGMGMDRLLMALTGL-GIRETVLFPI 519


>gi|71033395|ref|XP_766339.1| asparaginyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68353296|gb|EAN34056.1| asparaginyl-tRNA synthetase, putative [Theileria parva]
          Length = 558

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 4/79 (5%)

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G+EIA G IR H  EV+ +  +   IS E  E ++  L +       PHGG   G DR+V
Sbjct: 483 GYEIAGGSIREHEYEVLKRKVNERKISGEDYE-KYLNLRKNVYL---PHGGFGIGFDRLV 538

Query: 548 MLLLGAKNVREVSLFPMSQ 566
           ML+   +N+R+V+ FP+++
Sbjct: 539 MLMTMKENIRDVTPFPVTK 557



 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 112/311 (36%), Gaps = 53/311 (17%)

Query: 21  VRLSGWVHRVR--PHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCID-- 74
           V   G+V  +R      + F+DI D   +   Q+V N  +   E+      + +  +   
Sbjct: 118 VNTRGFVQEIRRINSQNLYFIDINDGSTLANLQIVVNQANNFKELESLKNGDHLYAVGTM 177

Query: 75  ----GLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYR 129
               G+   RS    +  I     E    K++I   +E+ L  PV    EY +    KY 
Sbjct: 178 DRRRGVPSERSLSDFDLYINHNNPE---HKLKIHKYSEDDLENPVIPNIEYSDEYLRKYT 234

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
               R       I  R+ I + +     +  F E  TP LT  + E           N  
Sbjct: 235 HFRFRNKQFRSIIAIRSAIKSYIHQFFTSNKFTEVDTPCLTLMNCE-----------NLA 283

Query: 190 SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
               +P    +  Q +      G  + +++ P FR E   + R   EF+ ++ E+     
Sbjct: 284 PLTNIPVNLSSTGQMELEFACYGLGKVWKVGPSFRGERSDTIRHANEFWMIEAEIPDATL 343

Query: 247 DDILNTMENVLRG-----------VFEEFSNGNTVSNNFL---------RICYDDAIR-- 284
             ++N ++ ++RG             +  +N N    +FL          I Y+DA+R  
Sbjct: 344 TGMINLIQELIRGCATYILQNHEDYVKYLNNFNDKYKDFLVHLSNANIKMITYEDAVRIL 403

Query: 285 ---RYGTDKPD 292
                G DK D
Sbjct: 404 NETNSGLDKQD 414


>gi|283768797|ref|ZP_06341708.1| lysine--tRNA ligase [Bulleidia extructa W1219]
 gi|283104583|gb|EFC05956.1| lysine--tRNA ligase [Bulleidia extructa W1219]
          Length = 646

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 24/210 (11%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F+ + D  G  Q+V N        +E+ K      ++ + G +M 
Sbjct: 67  VAGRIMMKRRMGKMGFISLLDKTGRIQIVMNQRIIGEEIYELFKKSDLGDIIGVKGTIMK 126

Query: 80  RSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
                      TG++ + A +   L+ A   LP    G ++  E  R++ R+LDL   D 
Sbjct: 127 TQ---------TGELSIEAHEYTHLTKALRPLPDKFHGLQDKEE--RYRRRYLDLITNDE 175

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPI----LTASSPEGARDFLVPSRVNQGSFYA 193
             K  + R +II+++R  M ++ +IE  TP+    LT +S   AR F+         FY 
Sbjct: 176 SRKVAILRPKIISAIRHYMDSQGYIEVETPVLQPLLTGAS---ARPFITHHNALDRDFY- 231

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           L  A +   + L+  G +R ++I   FR+E
Sbjct: 232 LRIATELPLKRLIVGGLERVYEIGRIFRNE 261



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GGI  GIDR VMLL G  ++R+V LFP
Sbjct: 459 ALEYGLPPTGGIGFGIDRFVMLLTGNDSIRDVLLFP 494


>gi|222149832|ref|YP_002550789.1| lysyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221736814|gb|ACM37777.1| lysyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 498

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/303 (22%), Positives = 137/303 (45%), Gaps = 31/303 (10%)

Query: 2   HRYRTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +L          ++ G  V ++G ++  R  G  +F+D+RD  G  Q+ ++
Sbjct: 36  HFHRTATTAELAEKYAELEPDTESGDTVTVAGRIYSSRNSG--MFMDLRDASGKIQIFSH 93

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D    E     R+   +   G ++  +          G++ ++A+ I +L+    LP+P
Sbjct: 94  KDMTPEE----ARAMLPMIDLGDIVGVTGPVRRTK--RGELTINAETITMLTKTL-LPMP 146

Query: 114 VFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                     +R++ R LD L  D       +R++I++ +R  M ++ F+E  TP+L + 
Sbjct: 147 EKYHGVTDIEVRYRKRHLDILTNDESKLRFQQRSKIVSGIRRFMESDGFMEVETPMLQSV 206

Query: 173 SPEGARD-FLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRL 230
               + D F       +   Y L  AP+ + +  + SG  D+ F+I   FR+E   +   
Sbjct: 207 YGGASADPFKTHHNTLKQDMY-LRIAPELFLKRTLVSGLADKIFEINRNFRNEGVSTRHN 265

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVF------EEFSNGN---TVSNNFLRICYDD 281
           P EF  ++   ++ + +D+++ +E +   +        EF+ G+   +    F R+   D
Sbjct: 266 P-EFTMMECYWAYADYEDVMDLVERLFADLAMRIHGSTEFAFGDKEISFKGPFKRVPMPD 324

Query: 282 AIR 284
           A++
Sbjct: 325 AVK 327



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 12/98 (12%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++  CN +EI +           R  M E + QA +  G   + +++ F     A   G
Sbjct: 405 RFETYCNAWEIGNAFSELNDPEEQRKRMVEQLEQAHAR-GEKDKQLDDEF---LDAIDQG 460

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR++MLL  A ++R++ LFP  +   D
Sbjct: 461 MPPAGGLGIGVDRLIMLLTNAPSIRDIILFPARRAKVD 498


>gi|108709561|gb|ABF97356.1| Lysyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 595

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 77/152 (50%), Gaps = 4/152 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R+LDL  +   ++I K R+++++ +R  +   +F+E  TP++   +    AR 
Sbjct: 250 QETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDGLDFLEVETPMMNMIAGGAAARP 309

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  AP+ Y + L+  G DR ++I   FR+E       P EF   + 
Sbjct: 310 FVTHHNELNMRLY-MRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTTCEF 367

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
            M++ + +D++   E +L G+ +E + G  + 
Sbjct: 368 YMAYADYNDLIELTETMLSGMVKELTGGYKIK 399



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ MLL  ++N++EV LFP
Sbjct: 554 ALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFP 589


>gi|213401987|ref|XP_002171766.1| cytoplasmic lysine-tRNA ligase Krs1 [Schizosaccharomyces japonicus
           yFS275]
 gi|211999813|gb|EEB05473.1| cytoplasmic lysine-tRNA ligase Krs1 [Schizosaccharomyces japonicus
           yFS275]
          Length = 590

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 87/179 (48%), Gaps = 7/179 (3%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           G++ + A++  +LS     LP   +G ++    IR + R+LDL   ++     V R+RII
Sbjct: 197 GELSVFARQCVLLSPCLRMLPKEHYGLKDL--EIRHRQRYLDLIMNNSTRDRFVARSRII 254

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R  +   NFIE  TP++   +    A+ F+          Y +  AP+ Y ++L+  
Sbjct: 255 QYLRNFLDKRNFIEVETPMMNMIAGGATAKPFVTHHNDLDMDLY-MRVAPELYLKMLVVG 313

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
           G DR ++I   FR+E       P EF   +   ++ +  D+++  E ++  + +E + G
Sbjct: 314 GLDRVYEIGRQFRNEGADLTHNP-EFTSCEFYQAYADYYDLMDMTEELVSSMVKELTGG 371



 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+VM L  +  +REV LFP
Sbjct: 539 ALEYGLPPTGGWGIGIDRLVMFLTDSNTIREVLLFP 574


>gi|145238062|ref|XP_001391678.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS
           513.88]
 gi|134076157|emb|CAK48970.1| unnamed protein product [Aspergillus niger]
          Length = 559

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 34/207 (16%)

Query: 77  VMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF-GEREYPES----------- 123
           ++ + A  I++  ++   E+  +K+ ++S  A+ LP+ V   ER  PE+           
Sbjct: 161 IIKKPAVPISSATLSNH-EIHIRKVYMISEAAQMLPMQVKDAERPPPETSEEGFEVGEDG 219

Query: 124 -------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS-----TPILTA 171
                   R   R LDL+ +T      +    I+S    + AE  I+       TP L  
Sbjct: 220 APIVTLKTRLDNRVLDLQTET-----SQAITWISSGVAELFAEYMIKSGSRWIFTPKLVG 274

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +        + ++ A  Q+PQ YKQ+ +A   +  F+IAP FR ED  + R  
Sbjct: 275 AATEGGSNVFEVKYFKKNAYLA--QSPQLYKQMCIAGDMESVFEIAPVFRAEDSNTHRHL 332

Query: 232 GEFYQLDMEMSFV-EQDDILNTMENVL 257
            EF  LD E +F     ++L   EN+L
Sbjct: 333 TEFAGLDFEKTFRGHYHEVLEFAENLL 359



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R +  + + ++    G++    +  F     AF+ G PPH G   
Sbjct: 472 YDFFMRGEEIMSGAQRINDIKELEESMVAKGLNPN--QEGFEDYLSAFRQGCPPHAGGGL 529

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIVM  LG  NVR  SLFP
Sbjct: 530 GLNRIVMFFLGLPNVRLASLFP 551


>gi|332652695|ref|ZP_08418440.1| lysine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332517841|gb|EGJ47444.1| lysine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 643

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 111/244 (45%), Gaps = 15/244 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G + F D++D  G  Q+ A  D    E     +   +    G +
Sbjct: 60  GQPVSIAGRLMSKRGMGKVSFCDLQDKSGRIQLYARKDEMDEEEYNRFKKYDI----GDI 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
           +    E        G++ +  QK+ +LS +       F      E +R++ R++DL  + 
Sbjct: 116 VGVQGEVFRTQ--RGEMSVRVQKVTLLSKSLLPLPEKFHGLTNTE-LRYRQRYVDLIVNP 172

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
            + +N + R++ I  +R  M A  F+E  TP+L T S    AR F+          Y   
Sbjct: 173 EVKRNFIIRSQFIKYVRDFMDARGFMEVETPVLNTISGGATARPFITHHNTLDIDMYMRI 232

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                 K+L++  G DR ++I   FR+E  DP+ +    EF  +++  ++ + +D+++  
Sbjct: 233 ATELPLKRLIVG-GMDRVYEIGRIFRNEGMDPKHN---PEFTTIELYQAYADFNDMMDLF 288

Query: 254 ENVL 257
           E++L
Sbjct: 289 EDLL 292



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR VMLL  + ++REV LFP
Sbjct: 459 ALEYGLPPTGGLGIGIDRCVMLLTNSDSIREVILFP 494


>gi|193217032|ref|YP_002000274.1| asparaginyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|226695299|sp|B3PNG8|SYN_MYCA5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|193002355|gb|ACF07570.1| asparaginyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 450

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 32/254 (12%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           ++GWV   R +  I F+ + D   +   Q+V   D    EI K       + +D L +  
Sbjct: 23  VNGWVVSSRGNDKIRFVTLNDGSSVENLQLVLKED----EIKK-------VNVDHLSLGA 71

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH- 139
           +       I+T +   + Q  E L V+E   L + G+ +    I+ K   LD  R+  H 
Sbjct: 72  AVYAKGVLILTPE---AKQPFE-LVVSE---LEIIGKVDNNFPIQKKETSLDFLREIPHL 124

Query: 140 ---KNIVKRTRIINSMRCRMIAE-----NFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
               N+ +   II +     I +     +FI  S PI+T++  EGA + L+    ++  F
Sbjct: 125 RHRTNLFRAIMIIRATLAYEIHQFFNKNDFINISVPIITSNDGEGAGETLLVDDESKDYF 184

Query: 192 Y---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           +   A      Q      A+GF   +  AP FR E+  + R   EF+ ++ EM+F    D
Sbjct: 185 FKQKAFLGVTGQLHAEAYAAGFKNVYTFAPTFRAENSHTSRHLAEFWMIEPEMAFATLKD 244

Query: 249 ILNTMENVLRGVFE 262
            +   +++L+ V +
Sbjct: 245 DIKIADSMLKTVIK 258


>gi|50291447|ref|XP_448156.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527467|emb|CAG61107.1| unnamed protein product [Candida glabrata]
          Length = 543

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 127/277 (45%), Gaps = 35/277 (12%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           S  +  ++ +   + L G +  +R  G  + F+D+ D     Q++ N    C EI  S  
Sbjct: 73  STSEDQLNKINQKISLCGRIKSIRFSGKKMAFIDLVDGIHGIQLILN----CREIGNSAT 128

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIE-----------ILSVAEELPLPVF 115
            E       L   R  + +   + TG   LS  +++           ILSVA+ +PLP  
Sbjct: 129 FE-----SELSFLRKGDYV---MTTGLPRLSKSRMKNISLRCTDLPKILSVAQ-MPLPP- 178

Query: 116 GEREYPESIRFKY-RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
              +  ++++    + +D + +    NI  R+ I+ S+R  +   +FIE  TPIL++ S 
Sbjct: 179 ---KLIDTVKSNSNKVVDYQINGFQ-NIRIRSSILKSIRNFLEERDFIEVETPILSSKSN 234

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+  S+        L  AP+ + + L+ SG ++ F+I   FR+E       P E
Sbjct: 235 GAVAKPFMSSSK--DFDKLMLRVAPELWLKRLIISGCNKVFEIGKSFRNEGIDGSHNP-E 291

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
           F  L+   S++  +D++   E++ + +  + +N  T+
Sbjct: 292 FTTLEFYQSYLTMEDLIKLNEDLFKKIITDLTNNLTI 328



 Score = 38.5 bits (88), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           A + GMPP GG   GIDR+ ML+ G + + +V  F
Sbjct: 500 AMKWGMPPIGGFGLGIDRLCMLITGCQRIEQVLPF 534


>gi|296439739|sp|A0QHC4|LYSX_MYCA1 RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
          Length = 1177

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 23/227 (10%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D    + ++G + R+R  GG++F  +RD  G  QV+   D++  E  ++ 
Sbjct: 723 SHTVAQALDADDQQDITVAGRILRIRDFGGVLFAQLRDWSGEMQVLL--DNSRLERGRTA 780

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-------LPLPVFGER 118
                + +  LV            ++GQ+  S +    L V +         PLP   + 
Sbjct: 781 DFTAAIDLGDLVE-----------VSGQMGFSKKGTRSLIVTDWRMIGKCLRPLPNKWKG 829

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                 R + R++DL  +   + ++  R+ ++ S+R  + A+ FIE  TPIL        
Sbjct: 830 LTDPEARVRTRYVDLAVNPESRELIAARSEVLRSVRQTLFAKGFIEVETPILQQIHGGAT 889

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           AR F+          + L  AP+ Y + L   G +R F++   FR+E
Sbjct: 890 ARPFVTHINTYDMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNE 935



 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+A+           R  + E  L A      + E+ E+      +A +
Sbjct: 1085 AERWDLVAWGVELATAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAME 1140

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  G+DR+VML+ G +++RE   FP+++
Sbjct: 1141 YAMPPTGGLGMGVDRLVMLITG-RSIRETLPFPLAK 1175


>gi|15966657|ref|NP_387010.1| lysyl-tRNA synthetase protein [Sinorhizobium meliloti 1021]
 gi|307300308|ref|ZP_07580088.1| lysyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307319591|ref|ZP_07599017.1| lysyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|17380505|sp|O87821|SYK_RHIME RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|15075929|emb|CAC47483.1| Lysyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306894713|gb|EFN25473.1| lysyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306904474|gb|EFN35058.1| lysyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 498

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 117/246 (47%), Gaps = 14/246 (5%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           ++ G  V ++G V   R  G  +F+D+ D  G  Q+ ++ D+A  E     R+   +   
Sbjct: 57  TESGETVTVAGRVFSSRNSG--MFMDLHDASGKIQIFSHKDTAPEE----ARALLPMIDL 110

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++  + E        G++ ++A++I +L  +  LP+P           R++ R+LD+ 
Sbjct: 111 GDIIGVTGEVRRTK--RGELTVNAKEITMLCKSL-LPMPEKYHGLADIETRYRKRYLDIM 167

Query: 135 RDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +   K    +R+RI++S+R  +  E F+E  TP+L        A  F       +   Y
Sbjct: 168 VNEESKLRFQQRSRIVSSLRRFLEDEGFMEVETPMLQPIYGGATAEPFKTHHNTLKLDMY 227

Query: 193 ALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
            L  AP+ Y + ++ SG  D+ F+I   FR+E   +   P EF  ++   ++ + +D++ 
Sbjct: 228 -LRIAPELYLKRILVSGLTDKVFEINRNFRNEGVSTRHNP-EFTMMECYWAYADYEDVMG 285

Query: 252 TMENVL 257
            +E + 
Sbjct: 286 LVERMF 291



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 12/98 (12%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++  CNG+EI +           R  M E M QA +     K + E+       A   G
Sbjct: 405 RFETYCNGWEIGNAFSELNDPVEQRARMVEQMEQAHARGEKEKTLDED----FLDAMDQG 460

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR++MLL  + ++R++ LFP  +   D
Sbjct: 461 MPPAGGLGIGVDRLIMLLTNSPSIRDIILFPARRQKAD 498


>gi|95929407|ref|ZP_01312150.1| lysyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95134523|gb|EAT16179.1| lysyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 494

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 102/218 (46%), Gaps = 15/218 (6%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           T ++ L A+ + +L+ + + PLP           R++ R+LDL  +    ++ K R++II
Sbjct: 122 TDELSLRAESLTLLTKSLQ-PLPEKWHGLTDVETRYRQRYLDLIVNPEVGDVFKKRSQII 180

Query: 150 NSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           + MR  M   +++E  TP++   +    A+ F+      +   + L  AP+ Y + L+  
Sbjct: 181 SLMRAFMQERDYLEVETPMMQPVAGGATAKPFVTHHNTLKMDLF-LRIAPELYLKRLVVG 239

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GF+R F+I   FR+E       P EF  ++   ++    D+++  E ++  + E+     
Sbjct: 240 GFERVFEINRNFRNEGISIQHNP-EFTMMEFYQAYATYHDLMDMTEEMIGSIAEKVCGSR 298

Query: 269 TVSNN---------FLRICYDDAIRRYG-TDKPDLRNP 296
            +S           + R+   +AI +YG     DL +P
Sbjct: 299 VISYGGKDVDLTAPWDRLTVKEAIVKYGDISLEDLEDP 336



 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 451 RALEYGLPPTAGEGIGIDRLVMLLTDSASIRDVILFP 487


>gi|332970948|gb|EGK09922.1| lysine--tRNA ligase [Desmospora sp. 8437]
          Length = 499

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 116/258 (44%), Gaps = 23/258 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS----EWVLCIDGL 76
           V ++G +   R  G   F  ++D  G  Q+    D    E  ++  +    +W L I G+
Sbjct: 64  VVIAGRLVAKRKQGKASFAHLQDQTGRIQIYVRKDEVGEEDYETFSTADLGDW-LGISGI 122

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRR 135
           V             T + E S +  E+  +++ L PLP          +R++ R+LDL  
Sbjct: 123 VFK-----------TNRGETSVKAAELTFLSKSLRPLPEKFHGLKDVELRYRKRYLDLIM 171

Query: 136 DTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFY 192
           +   KN  + R+RII+++R  +    ++E  TP L  + P G  AR F+          Y
Sbjct: 172 NPEVKNTFITRSRIISTIRRYLDGRGYLEVETPTL-HNIPGGAAARPFITHHNALDMELY 230

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  A + + + L+  G ++ ++I   +R+E   +   P EF  L++  +F +  DI++ 
Sbjct: 231 -MRIAIELHLKRLIVGGIEKVYEIGRVYRNEGISTRHNP-EFTMLELYEAFADFHDIMDL 288

Query: 253 MENVLRGVFEEFSNGNTV 270
            E ++  V  E    +T+
Sbjct: 289 TEQLITHVAREVLGSDTL 306



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 458 ALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVLLFP 493


>gi|294784425|ref|ZP_06749716.1| asparagine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294487997|gb|EFG35352.1| asparagine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 461

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 118/304 (38%), Gaps = 51/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV ++R      F+++ D   +   Q+V       F+    +     + + G ++
Sbjct: 19  IELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSISSTIKVKGTLV 78

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                       +GQ +E+ A KIEI   A+ L  P+  +R   E +R K   L  R +T
Sbjct: 79  KSQG--------SGQDLEVKADKIEIFQKAD-LEYPLQNKRHTFEYLRTKAH-LRARTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVN- 187
                  R+ +  ++       NF+   TPI+T S  EGA +           +P + N 
Sbjct: 129 FSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEMFRVTTLDMNKLPKKENG 188

Query: 188 ----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+          QL      + F   +   P FR E   + R   EF+ ++ E
Sbjct: 189 EIDFTKDFFGKSTNLTVSGQLNVETFCAAFRNVYTFGPTFRAEYSNTARHASEFWMVEPE 248

Query: 241 MSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLRICY 279
           ++F +    +   E +++ V +          EF N            N ++N+F R+ Y
Sbjct: 249 IAFADLSANMELAEAMVKFVIKYVMDTCPEEMEFFNSFIEKGLFDKLNNVLNNDFGRVTY 308

Query: 280 DDAI 283
            +AI
Sbjct: 309 TEAI 312



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  EI  G  R    E++L     +G+ KE  E      RFG           PH
Sbjct: 376 DLLAPGIGEIIGGSQREDSYEILLNRMKELGLDKESYEFYLDLRRFGSF---------PH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R++M L G +N+R+V  FP + N
Sbjct: 427 SGYGLGFERMMMYLTGMQNIRDVIPFPRTPN 457


>gi|326316036|ref|YP_004233708.1| lysyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323372872|gb|ADX45141.1| lysyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 518

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 16/217 (7%)

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
           AE       TG++ +    + +L+ +   P+P        + ++++ R++DL  D    K
Sbjct: 135 AEGTLMKTKTGELSVKVTTLRLLTKSLR-PMPDKFHGVADQEVKYRQRYVDLMTDEAARK 193

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
             + R++ ++ +R  M+   F+E  TP+L    P GA  + F+      +   Y L  AP
Sbjct: 194 RFIARSKAVSGIREFMVQHGFLEVETPMLH-PIPGGANAKPFVTHHNALEQEMY-LRIAP 251

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D+++  E ++R
Sbjct: 252 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYRDLMDFTEQLVR 310

Query: 259 -------GVFEEFSNGNTV--SNNFLRICYDDAIRRY 286
                  G  +    G  V  S  F R+   +AI R+
Sbjct: 311 DAATKAAGSLQLTYQGRAVDLSQPFERLTIREAILRH 347



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR++MLL  + ++R+V LFP
Sbjct: 476 RALEYGMPPTGGCGIGIDRLMMLLTDSPSIRDVILFP 512


>gi|225560791|gb|EEH09072.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 1009

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 6/84 (7%)

Query: 482  YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI--SKEVVENRFGGLYRAFQCGMPPHGGI 539
            YD    G EI SG  R + ++ +  A S  GI  + E  E+  G    AF+ G PPH G 
Sbjct: 922  YDFFMRGEEIMSGAQRINEAKELEAAMSAKGIDPNAEGFEDYIG----AFRQGCPPHAGG 977

Query: 540  AAGIDRIVMLLLGAKNVREVSLFP 563
              G++RIVM  LG  N+R  +LFP
Sbjct: 978  GLGLNRIVMFFLGLPNIRLATLFP 1001



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 32/254 (12%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--LCIDGLV----MSRSAETINANI 89
           + FL +R      Q V    SA  EI++ +  +W+  + ++ +V    + + AE    + 
Sbjct: 570 LAFLMLRQQGKKMQAVV---SASDEISRPM-VKWIGGINVNSIVKVTAIVKKAEIPVTSA 625

Query: 90  ITGQIELSAQKIEILSVAEE-LPLPVF-GEREYPES-----------IRFKYRFLDLRRD 136
               +EL  +K+ +++ A   LP+ V   ER  PES           +  K R LD R  
Sbjct: 626 TVKHLELHIRKVYMVAQASHMLPMQVKDAERPPPESVTEEVESEAPYVTLKTR-LDNRVL 684

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIEC-----STPILTASSPEGARDFLVPSRVNQGSF 191
            L     +    I+S   ++  E  ++      STP LTA++ EG       +   + ++
Sbjct: 685 DLQTEASQAITWISSGVAQLFMEYMLKSGSRWISTPKLTANASEGGAGVFEVTYFKRKAY 744

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDIL 250
            A  Q+PQ YKQ+ +A   +  F+I P FR E+  + R   EF  LD E +F     ++L
Sbjct: 745 LA--QSPQLYKQMCIAGDMESVFEIGPVFRAEESNTHRHLTEFVGLDFEKTFQSHYHEVL 802

Query: 251 NTMENVLRGVFEEF 264
              E++L  +  E 
Sbjct: 803 EFAEDLLVFILSEL 816


>gi|256028529|ref|ZP_05442363.1| asparaginyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766448|ref|ZP_06525826.1| asparaginyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289718003|gb|EFD82015.1| asparaginyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 461

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 115/307 (37%), Gaps = 57/307 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV ++R      F+++ D   +   Q+V       F+    +     + + G ++
Sbjct: 19  IELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSISSTIKVKGTLV 78

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                       +GQ +E+ A KIEI   A+ L  P+  +R   E +R K   L  R +T
Sbjct: 79  KSQG--------SGQDLEVKADKIEIFQKAD-LEYPLQNKRHTFEYLRTKAH-LRPRTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+ +  ++       NF+   TPI+T S  EGA +     RV       LP+ 
Sbjct: 129 FSAVFRVRSVLAYALHKFFQENNFVYVHTPIITGSDAEGAGEMF---RVTTLDMNKLPKK 185

Query: 198 PQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                                 Q       + F   +   P FR E   + R   EF+ +
Sbjct: 186 ENGEVDFTKDFFGKSTNLTVSGQLNVETFCAAFRNVYTFGPTFRAEYSNTARHASEFWMV 245

Query: 238 DMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLR 276
           + E++F +    +   E +++ V +          EF N            N ++N F R
Sbjct: 246 EPEIAFADLSANMELAEAMVKFVIKYVMDTCPEEMEFFNSFIEKGLFNKLNNVLNNEFGR 305

Query: 277 ICYDDAI 283
           I Y +AI
Sbjct: 306 ITYTEAI 312



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 15/91 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  EI  G  R    E++L+    +G+++E  E      RFG           PH
Sbjct: 376 DLLAPGIGEIIGGSQREDSYEILLKRMKELGLNEEDYEFYLDLRRFGSF---------PH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R++M L G +N+R+V  FP + N
Sbjct: 427 SGYGLGFERMMMYLTGMQNIRDVIPFPRTPN 457


>gi|325089080|gb|EGC42390.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 994

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 6/84 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI--SKEVVENRFGGLYRAFQCGMPPHGGI 539
           YD    G EI SG  R + ++ +  A S  GI  + E  E+  G    AF+ G PPH G 
Sbjct: 907 YDFFMRGEEIMSGAQRINEAKELEAAMSAKGIDPNAEGFEDYIG----AFRQGCPPHAGG 962

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             G++RIVM  LG  N+R  +LFP
Sbjct: 963 GLGLNRIVMFFLGLPNIRLATLFP 986



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 32/254 (12%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--LCIDGLV----MSRSAETINANI 89
           + FL +R      Q V    SA  EI++ +  +W+  + ++ +V    + + AE    + 
Sbjct: 555 LAFLMLRQQGKKMQAVV---SASDEISRPM-VKWIGGINVNSIVKVTAIVKKAEIPVTSA 610

Query: 90  ITGQIELSAQKIEILSVAEE-LPLPVF-GEREYPES-----------IRFKYRFLDLRRD 136
               +EL  +K+ +++ A   LP+ V   ER  PES           +  K R LD R  
Sbjct: 611 TVKHLELHIRKVYMVAQASHMLPMQVKDAERPPPESVTEEVESEAPYVTLKTR-LDNRVL 669

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIEC-----STPILTASSPEGARDFLVPSRVNQGSF 191
            L     +    I+S   ++  E  ++      STP LTA++ EG       +   + ++
Sbjct: 670 DLQTEASQAITWISSGVAQLFMEYMLKSGSRWISTPKLTANASEGGAGVFEVTYFKRKAY 729

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDIL 250
            A  Q+PQ YKQ+ +A   +  F+I P FR E+  + R   EF  LD E +F     ++L
Sbjct: 730 LA--QSPQLYKQMCIAGDMESVFEIGPVFRAEESNTHRHLTEFVGLDFEKTFQSHYHEVL 787

Query: 251 NTMENVLRGVFEEF 264
              E++L  +  E 
Sbjct: 788 EFAEDLLVFILSEL 801


>gi|282881979|ref|ZP_06290620.1| asparagine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281298009|gb|EFA90464.1| asparagine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 461

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 122/318 (38%), Gaps = 51/318 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           + + GW+   R      F+++ D  ++   QVV   +   F EI K   S  ++    LV
Sbjct: 19  IEICGWIKTNRGSKNFGFIELTDGTNFNSLQVVYGKELGNFSEIEKYTLSSSLIIKGKLV 78

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            S  A            EL A++I+++  A+    P+  +R   E +R     L  R +T
Sbjct: 79  ESPGANQ--------SFELQAKEIKLIGAADN-TYPLQKKRHTMEYLR-TVSHLRPRTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            +     R+ I  ++        F+    PI+TAS  EGA +    + +         + 
Sbjct: 129 FNAVFRVRSLIAYAIHKFFQERGFVYFHAPIITASDAEGAGEMFQVTTLPLEDIPKNDEG 188

Query: 198 PQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              YK+        L  SG          F   +   P FR E+  + R   EF+ ++ E
Sbjct: 189 KVDYKKDFFGKETNLTVSGQLEDEAFALAFGNVYTFGPTFRAENSNTPRHAAEFWMIEPE 248

Query: 241 MSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNFLRICY 279
           M+F + +  ++  E +L+ +              F +F +        N VSN F RI Y
Sbjct: 249 MAFADLNVNMDVAEAMLKYIIRYVLENAKEEMKFFNKFIDKDLLARLDNVVSNEFERITY 308

Query: 280 DDAIRRYGTDKPDLRNPI 297
             AI        D + P+
Sbjct: 309 TQAIEILEKANKDFKFPV 326


>gi|84623953|ref|YP_451325.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|123725534|sp|Q2P326|SYN_XANOM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|84367893|dbj|BAE69051.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 464

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 107/270 (39%), Gaps = 40/270 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D   +   QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           +++    +        GQ  E+ A  +EI+   E+ L  P+  +   PE +R       L
Sbjct: 77  VLVKSQGK--------GQSFEIQASGVEIVGWVEDPLTYPIQPKPMTPEFLR---EVAHL 125

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R R  L   + +    +     R   +N F   STPI+T S  EGA       RV+    
Sbjct: 126 RPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMF---RVSTLDM 182

Query: 192 YALPQAPQ----------QYKQLLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
             LP+               +  L  SG            + +   P FR E+  + R  
Sbjct: 183 VNLPRDATGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHL 242

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            EF+ ++ E++F +  +     E  L+ VF
Sbjct: 243 AEFWMIEPEIAFADLAEDARLAEQFLKYVF 272


>gi|312194051|ref|YP_004014112.1| lysyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311225387|gb|ADP78242.1| lysyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 488

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 133/304 (43%), Gaps = 30/304 (9%)

Query: 4   YRTH-SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           Y+T  +  D+  +  G+  R++G +   R  GG++F  I+D  G  Q+  N +    E  
Sbjct: 19  YQTDLTSADVQAAPDGTPARVAGRLMLWRRMGGLVFGTIQDRAGRVQISLNRNELGEETY 78

Query: 63  K----SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE 117
           K    SV+    + + G+V +            G+  + A    +L+ A   LP    G 
Sbjct: 79  KEWHSSVKVGDFVGVTGVVFTTR---------KGERTVGATDFAVLNKAVRALPDKWHGI 129

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILT-ASSPE 175
            +     R++ R+LDL  +   +   +    + S   R + + +F+E  TP+LT A+S  
Sbjct: 130 ADV--ETRYRRRYLDLLANPASRERFQTRSRVISRIRRFLDDADFLEVETPVLTEAASGA 187

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+         FY L  +P+ Y + ++A  FDR ++I   FR+E      L  EF 
Sbjct: 188 AARPFITRHNALGEDFY-LRISPETYLKRVVAGSFDRVYEIGRNFRNEGIDPSHLQ-EFT 245

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP--DL 293
            L+   ++ +  D +  +  ++  + ++     TV+       Y+     +G D P  D 
Sbjct: 246 MLEWYAAYWDYRDNMRFVRELILAILDDVIGSRTVT-------YEGTKLDFGADWPVIDY 298

Query: 294 RNPI 297
           R+ +
Sbjct: 299 RDAV 302



 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G+  GIDR + L+  A  +R+V LFP
Sbjct: 432 AMEYGMPPMSGLGLGIDRFIALITDAPTLRDVVLFP 467


>gi|58582041|ref|YP_201057.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188576346|ref|YP_001913275.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|75435313|sp|Q5H049|SYN_XANOR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|58426635|gb|AAW75672.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188520798|gb|ACD58743.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 464

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 107/270 (39%), Gaps = 40/270 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D   +   QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           +++    +        GQ  E+ A  +EI+   E+ L  P+  +   PE +R       L
Sbjct: 77  VLVKSQGK--------GQSFEIQASGVEIVGWVEDPLTYPIQPKPMTPEFLR---EVAHL 125

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R R  L   + +    +     R   +N F   STPI+T S  EGA       RV+    
Sbjct: 126 RPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMF---RVSTLDM 182

Query: 192 YALPQAPQ----------QYKQLLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
             LP+               +  L  SG            + +   P FR E+  + R  
Sbjct: 183 VNLPRDATGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHL 242

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            EF+ ++ E++F +  +     E  L+ VF
Sbjct: 243 AEFWMIEPEIAFADLAEDARLAEQFLKYVF 272


>gi|260495699|ref|ZP_05815822.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260196764|gb|EEW94288.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 461

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 115/307 (37%), Gaps = 57/307 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV ++R      F+++ D   +   Q+V       F+    +     + + G ++
Sbjct: 19  IELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSISSTIKVKGTLV 78

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                       +GQ +E+ A KIEI   A+ L  P+  +R   E +R K   L  R +T
Sbjct: 79  KSQG--------SGQDLEVKADKIEIFQKAD-LEYPLQNKRHTFEYLRTKAH-LRPRTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+ +  ++       NF+   TPI+T S  EGA +     RV       LP+ 
Sbjct: 129 FSAVFRVRSVLAYALHKFFQENNFVYVHTPIITGSDAEGAGEMF---RVTTLDMNKLPKK 185

Query: 198 PQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                                 Q       + F   +   P FR E   + R   EF+ +
Sbjct: 186 ENGEVDFTKDFFGKSTNLTVSGQLNVETFCAAFRNVYTFGPTFRAEYSNTARHASEFWMV 245

Query: 238 DMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLR 276
           + E++F +    +   E +++ V +          EF N            N ++N F R
Sbjct: 246 EPEIAFADLSANMELAEAMVKFVIKYVMDTCPEEMEFFNSFIEKGLFDKLNNVLNNEFGR 305

Query: 277 ICYDDAI 283
           I Y +AI
Sbjct: 306 ITYTEAI 312



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 15/91 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  EI  G  R    E++L+    +G+++E  E      RFG           PH
Sbjct: 376 DLLAPGIGEIIGGSQREDSYEILLKRMKELGLNEEDYEFYLDLRRFGSF---------PH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R++M L G +N+R+V  FP + N
Sbjct: 427 SGYGLGFERMMMYLTGMQNIRDVIPFPRTPN 457


>gi|297588296|ref|ZP_06946939.1| asparagine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297573669|gb|EFH92390.1| asparagine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 461

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/266 (21%), Positives = 109/266 (40%), Gaps = 36/266 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVR-SEWVLCIDGLV 77
           V + GW+   R    + F+++ D   +   Q+V   D+  FE ++ ++ S  ++ +  LV
Sbjct: 19  VEVGGWIKNSRFSKNVGFIELNDGTFFNPVQIVVGKDNEDFEKSEKLKLSSAIIVVGKLV 78

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           ++ +++           E+ A K+ I+        P+  +R   E +R     L  R +T
Sbjct: 79  LTPNSKQ--------PFEIQASKV-IVEGESTDDYPLQKKRHTFEFLR-TILHLRPRTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ- 196
            +     R+R+  ++        F+   TPI+T S  EGA +     RV       +P+ 
Sbjct: 129 FNAVFRVRSRLAFAIHKFFNERGFVYVHTPIITGSDAEGAGEMF---RVTTLDLDNIPKD 185

Query: 197 -------------------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                                 Q +    A  F   +   P FR E   + R   EF+ +
Sbjct: 186 DDGNVDFSQDFFSKSTNLTVSGQLQAEAYALAFRNVYTFGPTFRSEHSNTPRHAAEFWMM 245

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEE 263
           + E+ F + DD+ N  E+++R + ++
Sbjct: 246 EPEICFADLDDVCNLAEDMVRYIIKD 271



 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 15/94 (15%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  G  R    E++ +    +G +KE  +      ++GG+          H
Sbjct: 376 DLLVPGIGELIGGSQREERYELLDKKMDELGFNKEEYKWYLDLRKYGGV---------KH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           GG   G +R+VM + G  N+R+V  FP +   C+
Sbjct: 427 GGFGLGFERMVMYMTGMSNIRDVIPFPRTVGHCE 460


>gi|187735301|ref|YP_001877413.1| lysyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187425353|gb|ACD04632.1| lysyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 493

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 18/90 (20%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG--------LYRAFQCGM 533
           Y+LV NG EI+ G              ++  + KE +E++  G             + GM
Sbjct: 407 YELVINGQEISPG----------YSELNDPDVQKERLEHQAAGETQRVDYDFIETLEYGM 456

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  GGI  GIDR+VM+L GA ++R+V LFP
Sbjct: 457 PSAGGIGIGIDRVVMMLTGASSIRDVLLFP 486



 Score = 37.4 bits (85), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 24/267 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSV-RSEWVLCIDGL 76
           V ++G +  +R  G   F  I D  G  Q   +    D   +++ K + R +WV      
Sbjct: 58  VAVAGRLLAIRDMGKSQFFVIGDVRGKIQGFLHKNEVDETTWKLWKLLDRGDWVGIRGTT 117

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            ++R          TG+  +    + ILS +   PLP        + + ++ R LDL  +
Sbjct: 118 FLTR----------TGEPTVKVSGLTILSKSLR-PLPDKWHGLADKEVTYRKRHLDLISN 166

Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
               ++ V R+ +I  +R  +    ++E  TP+L   +   A                L 
Sbjct: 167 EESASLFVTRSLMIAEIRRFLQERGYLEVETPMLQDVAGGAAAKPFETYHNALDMPLTLR 226

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ + + LM  GF + F++   FR+E       P EF  L+   +  + + + N +E 
Sbjct: 227 IAPELFLKRLMVGGFTKIFELNRSFRNEGIDRRHNP-EFTMLEAYCACGDFETMANMVEE 285

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDA 282
           ++  + E+F  G       L+I + DA
Sbjct: 286 LICHLAEKFCGG-------LQIDHKDA 305


>gi|41407449|ref|NP_960285.1| lysyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
           K-10]
 gi|81414391|sp|Q740J9|LYSX_MYCPA RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|41395801|gb|AAS03668.1| LysX [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 1177

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 23/227 (10%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D    + ++G + R+R  GG++F  +RD  G  QV+   D++  E  ++ 
Sbjct: 723 SHTVAQALDADDQQDITVAGRILRIRDFGGVLFAQLRDWSGEMQVLL--DNSRLERGRTA 780

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-------LPLPVFGER 118
                + +  LV            ++GQ+  S +    L V +         PLP   + 
Sbjct: 781 DFTAAIDLGDLVE-----------VSGQMGFSKKGTRSLIVTDWRMIGKCLRPLPNKWKG 829

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                 R + R++DL  +   + ++  R+ ++ S+R  + A+ FIE  TPIL        
Sbjct: 830 LTDPEARVRTRYVDLAVNPESRELIAARSEVLRSVRQTLFAKGFIEVETPILQQIHGGAT 889

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           AR F+          + L  AP+ Y + L   G +R F++   FR+E
Sbjct: 890 ARPFVTHINTYDMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNE 935



 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+A+           R  + E  L A      + E+ E+      +A +
Sbjct: 1085 AERWDLVAWGVELATAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAME 1140

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  G+DR+VML+ G +++RE   FP+++
Sbjct: 1141 YAMPPTGGLGMGVDRLVMLITG-RSIRETLPFPLAK 1175


>gi|189219307|ref|YP_001939948.1| Lysyl-tRNA synthetase (class II) [Methylacidiphilum infernorum V4]
 gi|189186165|gb|ACD83350.1| Lysyl-tRNA synthetase (class II) [Methylacidiphilum infernorum V4]
          Length = 512

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 19/246 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA----KSVRSEWVLCIDGL 76
           VR++G +  +R  G   F  I+D     Q+ ANP S C EIA    K +    ++ ++G 
Sbjct: 73  VRIAGRILSIRDMGRSFFAHIQDQGSQMQIYANPQS-CGEIAFKQLKHLDIGDIVGVEGS 131

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRR 135
                 +     + + Q+           +A+ L PLP           R++ R+LDL  
Sbjct: 132 CFFTKTKEKTVRVKSWQL-----------LAKSLRPLPSQWYGLLDVEARYRQRYLDLIM 180

Query: 136 DTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           +   K + +KR++II  +R  +  + FIE  TP++   +   A +         G    L
Sbjct: 181 NPEVKRVFLKRSQIIKEIREFLHNKGFIEVETPMMQTVAGGAAANPFKTFHEALGIPLYL 240

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF++ F++   FR+E       P EF  L+   ++ +   +   +E
Sbjct: 241 RIAPELYLKRLLVGGFEKIFELNRNFRNEGISRKHNP-EFTMLEAYWAYGDCQSMAKLLE 299

Query: 255 NVLRGV 260
            ++  V
Sbjct: 300 EMIVAV 305



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 8/86 (9%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQ---AFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           ++L+ NG E+A G   + +++ ++Q        G  K+ ++  F     A + GMPP GG
Sbjct: 421 FELIVNGQELAPG--YSELNDPIVQRERLEKQAGEEKQKIDEEF---LLALEYGMPPAGG 475

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPM 564
           I  GIDR+ MLL G +++R+V LFP+
Sbjct: 476 IGLGIDRLTMLLSGQESIRDVILFPI 501


>gi|322411385|gb|EFY02293.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 497

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    DS     +EI K       L ++G +M 
Sbjct: 65  VAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKKADLGDFLGVEGEIMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A K+  LS +   PLP  F      E+I ++ R LDL   R+
Sbjct: 125 TD---------MGELSIKATKLTHLSKSLR-PLPEKFHGLTDIETI-YRKRHLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           + ++  V R+++I+ +R  +   +F+E  TP+L   +   A    V     Q     L  
Sbjct: 174 SFNR-FVTRSKMISEIRRYLDGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI+N  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADYLDIMNLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|295395018|ref|ZP_06805228.1| probable lysyl-tRNA synthetase [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294972085|gb|EFG47950.1| probable lysyl-tRNA synthetase [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 1125

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 12/179 (6%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIIN 150
           G++ +  ++  +L+ A   P P  G     E  R   R LDL  D   ++I V R+  I 
Sbjct: 751 GELSVFVEQFTLLAKAIR-PTPALGH-PVGEEERRTNRSLDLLTDVSARDILVARSSAIR 808

Query: 151 SMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMAS 208
           S+R  + A++++E  TP+L T      AR F   + +N      +L  AP+ Y + LM  
Sbjct: 809 SLRDTLHAQSYMEVETPMLHTVHGGAAARPFT--THINAYDMDLSLRIAPELYLKRLMVG 866

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI----LNTMENVLRGVFEE 263
           G DR F+I   FR+E   +   P EF  L+   S +   D+    +  +EN  R V  E
Sbjct: 867 GMDRIFEIGRNFRNEGVDATHNP-EFTSLEAYASGLTYHDMERLTIALIENAARAVNSE 924



 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 13/91 (14%)

Query: 481  QYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            Q+DLV  G E+ +           R  ++E  L A +    + EV E        A + G
Sbjct: 1033 QWDLVAFGMEVGTAYSELIDPMIQRERLTEQSLAAAAGDPEAMEVDE----AFLTALEMG 1088

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             PP GG+  G+DR+VM +L A  +R+   FP
Sbjct: 1089 APPMGGLGLGVDRVVM-MLTATTIRQTLTFP 1118


>gi|221481971|gb|EEE20337.1| lysyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
 gi|221505048|gb|EEE30702.1| lysyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 658

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 26/248 (10%)

Query: 21  VRLSGWVHRVRPHGGII-FLDIRDHYGITQVVAN-----PDSACF-EIAKSVRSEWVLCI 73
           V+++G + RV   G  + F DIR      QV++N       +  F E+    R   V+ I
Sbjct: 185 VQIAGRISRVSASGQKLRFYDIRGDGEKIQVMSNFSYHDEKAGDFSEVHNRFRRGDVIGI 244

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--SIRFKYRFL 131
            G                G++ +  +++ +LS      L +  ER   +   +RF++R+L
Sbjct: 245 RGF---------PGKSKRGELSIFPREVTLLSPC----LHMLPERNSLKDFEVRFRHRYL 291

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL   D   K  + R+RI+N +R  +    F+E  TP++   +    AR F         
Sbjct: 292 DLMVNDETRKTFLIRSRIVNYLRRFLEDRGFVEVETPMMNVIAGGAAARPFKTHHNDLDM 351

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y +  AP+ + ++L+  G DR F+I   FR+E       P EF   +   ++ + +D+
Sbjct: 352 DLY-MRIAPELFLKMLIVGGMDRVFEIGKNFRNEGIDMTHNP-EFTACEFYWAYADYNDL 409

Query: 250 LNTMENVL 257
           +N  E ++
Sbjct: 410 MNFTEELV 417



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L     ++EV LFP
Sbjct: 594 ALEYGLPPTGGWGIGIDRLTMFLSDHNTIKEVILFP 629


>gi|157113775|ref|XP_001652096.1| aspartyl-tRNA synthetase [Aedes aegypti]
 gi|108877614|gb|EAT41839.1| aspartyl-tRNA synthetase [Aedes aegypti]
          Length = 553

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 14/228 (6%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM- 78
           V+++GWVHR+R  G G++F+ +RD  G  Q V N D  C        +  VL  +  V  
Sbjct: 133 VKINGWVHRLRRQGKGLMFITLRDGTGFLQCVLN-DLMC-----QTYNALVLSTESAVQL 186

Query: 79  -SRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFGEREYPESIRFKYRFLDLRRD 136
                E        G  EL     E++ +A       +  E  +P+ ++   R + +R +
Sbjct: 187 FGTLKEVPEGKSAPGGHELHVDYWELIGLAPAGGADTILNEDAHPD-VQLDNRHIMIRGE 245

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
              K +  R  I+++ R       + E + P L  +  EG       +   + ++  L Q
Sbjct: 246 NTSKILKMRDVIMDAFRAHYHDRGYTEVTPPTLVQTQVEGGSTLFKLNYFGEEAY--LTQ 303

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           + Q Y +  + +  D Y  IA  +R E  R+ R   E+  ++ E  F+
Sbjct: 304 SSQLYLETCLPALGDVYC-IAQSYRAEQSRTRRHLAEYSHVEAECPFI 350



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 12/90 (13%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGI 539
           L+ N  EI  G +R+   E +++ +   GI  +     ++ R          G  PHGG 
Sbjct: 470 LLPNVGEIVGGSMRSWDHEELMEGYKREGIDPKPYYWYIDQRV--------YGSQPHGGY 521

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G++R +  LL   ++REV L+P   + C
Sbjct: 522 GLGLERFMCWLLNRYHIREVCLYPRFLDRC 551


>gi|93006235|ref|YP_580672.1| lysyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|123264560|sp|Q1QAW5|SYK_PSYCK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|92393913|gb|ABE75188.1| lysyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 514

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 16/208 (7%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIIN 150
           G + +  ++IE+L+ A   P+P           R++ R LDL   +T     + R+++I+
Sbjct: 140 GDLYVHIEEIELLTKALR-PMPNKFHGLADVEARYRNRHLDLMTNETTRDTFMVRSQVIS 198

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            +R  M+ E F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 199 GIRKFMLNERFMEVETPMM-HPIPGGAVARPFVTHHNALDMPLY-LRIAPELYLKRLVVG 256

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GF++ F+I   FR+E   +   P EF  ++   ++ +  D+++  E +   +  +     
Sbjct: 257 GFEKVFEINRSFRNEGVSTRHNP-EFTMIEFYQAYADYHDLMDLTERLFNELATDILGTT 315

Query: 269 TVSNN---------FLRICYDDAIRRYG 287
            ++           F+R+   DAI +Y 
Sbjct: 316 EITYQEEAISLKAPFIRLSMSDAIAKYA 343



 Score = 43.5 bits (101), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  E   + F      K+  ++    F   Y  A   G+PP 
Sbjct: 420 RFELFVGGRELANGFSELNDPEDQAERFLGQVAEKDAGDDEAMHFDAEYIEALSYGLPPT 479

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 480 AGEGIGIDRLVMLLTDSASIRDVILFP 506


>gi|323697660|ref|ZP_08109572.1| asparaginyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323457592|gb|EGB13457.1| asparaginyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 455

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 106/267 (39%), Gaps = 22/267 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIA 62
           RT     L  S     +R+ GWV   R + G  FL + D    G  QVV +      E  
Sbjct: 3   RTKILDALNASAPAEDIRIMGWVRSKRDNKGFSFLALNDGSCLGTIQVVVDHTPEIEEAL 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYP 121
             + +   + + G ++    +        GQ  E+  + +E++  A++   P+  +R   
Sbjct: 63  ARIGTGASVAVTGSLVESPGQ--------GQKWEVRGRTLEVIGEADQETFPLQKKRHSD 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R     L  R +        R+ +  ++      + F    TPI+T S  EGA +  
Sbjct: 115 EFLR-SIAHLRPRTNKFGAMFRMRSHLAQAVHRFFADKGFFYVHTPIITGSDCEGAGEMF 173

Query: 182 VPSRVNQGS-------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLP 231
             + +  GS       F+  P       QL   + A      +   P FR E+  + R  
Sbjct: 174 RVTALPPGSPEPAENDFFGKPSNLTVSGQLSVEMFALSLGDCYTFGPTFRAENSNTPRHA 233

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLR 258
            EF+ ++ E+ F + +D ++  E +++
Sbjct: 234 AEFWMIEPEICFADLNDDMDLGEEMIK 260



 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    +V+      +G++K    + +     + + G  PH G   G +R++ML
Sbjct: 378 EIIGGSQREERLDVLTARMDELGLNK----DEYWWYLDSRRYGTAPHAGFGMGFERMLML 433

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G  N+R+V  FP +    D 
Sbjct: 434 VTGVHNIRDVIPFPRTPKSLDF 455


>gi|121609996|ref|YP_997803.1| lysyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|121554636|gb|ABM58785.1| lysyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 527

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 7/182 (3%)

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHK 140
           AE       T ++ +   ++ +L+ +   PLP        +  +++ R++DL  D    +
Sbjct: 144 AEGTLMKTRTDELSIKVTRLRLLTKSLR-PLPDKFHGLADQEQKYRQRYVDLITDAQARQ 202

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
             V R++ ++ +R  M+   F+E  TP+L    P GA  R F+      +   Y L  AP
Sbjct: 203 RFVARSKAVSDLREFMVGHGFLEVETPMLH-PIPGGANARPFVTHHNALEQQMY-LRIAP 260

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   +R+E       P EF  L+   ++    D+++  E ++R
Sbjct: 261 ELYLKRLIVGGFERVFEINRSYRNEGISVRHNP-EFTTLEFYAAYWNYLDVMDFTETLIR 319

Query: 259 GV 260
            V
Sbjct: 320 AV 321



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR++MLL  + ++R+V LFP
Sbjct: 485 RALEYGMPPTGGCGIGIDRLMMLLTDSPSIRDVILFP 521


>gi|295101200|emb|CBK98745.1| asparaginyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 462

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 126/330 (38%), Gaps = 67/330 (20%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC-IDGL 76
           G+ V + GW   +R    I F            +A  D  CF+  + V     L   D +
Sbjct: 17  GTVVTVCGWAKNIRDSKNIGF------------IALSDGGCFKTLQVVLEAGKLANYDEV 64

Query: 77  V---MSRSAETINANIITGQ----IELSAQKIEILS--VAEELPLPVFGEREYPESIRFK 127
           V   +  S   +   ++T Q     EL+A  +EIL    A+E PL     ++   S+ + 
Sbjct: 65  VHTGLYSSLRVVGRIVLTPQAKQPFELNADSVEILGDCPADEYPL-----QKKKMSMEYL 119

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRC-RMIAEN-FIECSTPILTASSPEGARDFL---- 181
                LR  T   N   R R + +    +   EN F+   +P+LTAS  EGA +      
Sbjct: 120 RTMPTLRPRTNTFNAAFRVRSVAAYAIHKFFQENGFVYAHSPLLTASDCEGAGEMFRVTT 179

Query: 182 -----VPSRVN-----QGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                VP   +        F+  P       Q +   MA  F + +   P FR E   + 
Sbjct: 180 LDLDNVPKNEDGTVDYTKDFFEKPVNLTVSGQLEAEAMAMAFGKVYTFGPTFRAEKSFTT 239

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSNGNTV---- 270
           R   EF+ ++ EM+F + +  ++T E + + V              F +F +   +    
Sbjct: 240 RHAAEFWMIEPEMAFCDLNGYMDTAEAMTKYVIRYVLDNCPDEMAFFNQFIDKGLIERLE 299

Query: 271 ---SNNFLRICYDDAIRRYGTDKPDLRNPI 297
              ++ F RI Y DAI     +    + P+
Sbjct: 300 LVANSEFGRISYTDAIEILKKNNKKFQFPV 329


>gi|171322227|ref|ZP_02911073.1| lysyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171092452|gb|EDT37798.1| lysyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 508

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 130/314 (41%), Gaps = 42/314 (13%)

Query: 6   THSCGDLGV----SDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL      SD  +       V ++G +   R  G   F  ++D  G  Q    P+
Sbjct: 43  THHAADLQATFADSDKAALEANPVEVSVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPN 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + + +W L   G +++        N   G++ +  +++ +LS A   PLP  
Sbjct: 103 DVGAETYDAFK-KWDL---GDIVAARGVLFRTN--KGELSVQCKELRLLSKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                 + +R++ R++DL      RDT       RTR I S+R  M   +F+E  TP+L 
Sbjct: 156 FHGLADQEMRYRQRYVDLIVTPETRDTFRA----RTRTIASIRKFMDNADFMEVETPMLH 211

Query: 171 A-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRS 227
                  A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   PR 
Sbjct: 212 PIPGGAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRH 270

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRIC 278
           +    EF  ++   ++ +   +++  E ++R    +     T+         +  F R+ 
Sbjct: 271 N---PEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAQPFHRLT 327

Query: 279 YDDAIRRYGTDKPD 292
              AI++Y     D
Sbjct: 328 ITQAIQKYAPQYTD 341



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFMTGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMFFDADYIRALEHGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|118619355|ref|YP_907687.1| lysyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118571465|gb|ABL06216.1| lysyl-tRNA synthetase 1 LysS [Mycobacterium ulcerans Agy99]
          Length = 498

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 20/270 (7%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTH+  ++          S     V ++G V   R  G + F  ++D  G TQ+ A    
Sbjct: 36  RTHTLAEIRATYADLPTDSATEDIVGVAGRVVFARNTGKLCFATLQDGDG-TQLQAM--I 92

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +  E+ +     W   +D G V+      I++    G++ + A    + + A   PLPV 
Sbjct: 93  SLDEVGRESLDRWKADVDIGDVVYVHGTVISSR--RGELSVLADSWRMAAKALR-PLPV- 148

Query: 116 GEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASS 173
             +E  E  R + R++DL  R    +   +R  +I ++R  +    F+E  TP+L T + 
Sbjct: 149 AHKEMSEESRVRQRYVDLIVRPQAREVARQRIAVIRAVRNALERRGFLEVETPMLQTLAG 208

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  GFDR F++   FR+E   S   P E
Sbjct: 209 GAAARPFVTHSNALDIDLY-LRIAPELFLKRCIVGGFDRVFELNRVFRNEGSDSTHSP-E 266

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++   DD       +++ V +E
Sbjct: 267 FSMLETYQTYGTYDDSALITRELIQEVADE 296



 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G   GIDR++M L G  ++RE  LFP+
Sbjct: 457 ALEYGMPPCTGTGMGIDRLLMCLTGL-SIRETVLFPI 492


>gi|237837009|ref|XP_002367802.1| lysyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211965466|gb|EEB00662.1| lysyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 658

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 26/248 (10%)

Query: 21  VRLSGWVHRVRPHGGII-FLDIRDHYGITQVVAN-----PDSACF-EIAKSVRSEWVLCI 73
           V+++G + RV   G  + F DIR      QV++N       +  F E+    R   V+ I
Sbjct: 185 VQIAGRISRVSASGQKLRFYDIRGDGEKIQVMSNFSYHDEKAGDFSEVHNRFRRGDVIGI 244

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--SIRFKYRFL 131
            G                G++ +  +++ +LS      L +  ER   +   +RF++R+L
Sbjct: 245 RGF---------PGKSKRGELSIFPREVTLLSPC----LHMLPERNSLKDFEVRFRHRYL 291

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL   D   K  + R+RI+N +R  +    F+E  TP++   +    AR F         
Sbjct: 292 DLMVNDETRKTFLIRSRIVNYLRRFLEDRGFVEVETPMMNVIAGGAAARPFKTHHNDLDM 351

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y +  AP+ + ++L+  G DR F+I   FR+E       P EF   +   ++ + +D+
Sbjct: 352 DLY-MRIAPELFLKMLIVGGMDRVFEIGKNFRNEGIDMTHNP-EFTACEFYWAYADYNDL 409

Query: 250 LNTMENVL 257
           +N  E ++
Sbjct: 410 MNFTEELV 417



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L     ++EV LFP
Sbjct: 594 ALEYGLPPTGGWGIGIDRLTMFLSDHNTIKEVILFP 629


>gi|295114740|emb|CBL35587.1| asparaginyl-tRNA synthetase [butyrate-producing bacterium SM4/1]
          Length = 463

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 107/266 (40%), Gaps = 34/266 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
           +G  +R+ GWV  VR      F+ + D  ++   QVV + +   F EI+K      +L  
Sbjct: 17  LGKEIRIGGWVRSVRDSKTFGFIVVSDGSYFETLQVVYHDNMENFSEISKLNVGAAILVK 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP-LPVFGEREYPESIRFKYRFLD 132
             LV +  A+               Q  E+L      P  P+  +R   E +R     L 
Sbjct: 77  GTLVATPEAKQ----------PFEIQATEVLVEGASSPDYPLQKKRHSLEYLR-TISHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VP 183
            R +T       R+ I  ++       +F+   TP++T S  EGA +           VP
Sbjct: 126 PRTNTFQAVFRVRSLIAYAIHQYFQERDFVYVHTPLITGSDCEGAGEMFQVTTMDLANVP 185

Query: 184 SRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            + + GS      F+  P       QL     A  F   +   P FR E+  + R   EF
Sbjct: 186 -KASDGSVDFSQDFFGKPTNLTVSGQLNAETYAMAFRNVYTFGPTFRAENSNTTRHAAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGV 260
           + ++ EM+F + +D +   E++L+ V
Sbjct: 245 WMIEPEMAFADLNDNMALAESMLKYV 270



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E +L     +G+ KE     +G      + G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDYEKLLARMDELGLKKE----DYGFYLDLRKYGSVRHSGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMGNIRDVIPFPRTVNNCEL 463


>gi|21231015|ref|NP_636932.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768980|ref|YP_243742.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|24212400|sp|Q8PAC4|SYN_XANCP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|81305056|sp|Q4UTA1|SYN_XANC8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|21112638|gb|AAM40856.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66574312|gb|AAY49722.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 464

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 106/270 (39%), Gaps = 40/270 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D   +   QVVA      F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVATDTLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           +++    +        GQ  E+ A  +EI+   E+ L  P+   +  P S  F      L
Sbjct: 77  VLVKSQGK--------GQSFEIQASGVEIVGWVEDPLTYPI---QPKPMSPEFLREVAHL 125

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R R  L   + +    +     R   +N F   STPI+T S  EGA       RV+    
Sbjct: 126 RPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMF---RVSSLDM 182

Query: 192 YALPQAPQQ----------YKQLLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
             LP+  Q            +  L  SG            + +   P FR E+  + R  
Sbjct: 183 VNLPRTAQGEVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHL 242

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            EF+ ++ E++F +  +     E  L+ +F
Sbjct: 243 AEFWMIEPEIAFADLAEDARLAEQFLKYLF 272


>gi|325188444|emb|CCA22980.1| lysyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 669

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 114/254 (44%), Gaps = 22/254 (8%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPD-----SACFEIAKSVRSEWVLCID 74
           + ++G +H  R  G  ++F D+R      QV+++ +      + ++I   +R   ++ I 
Sbjct: 136 ISVAGRLHSKRASGSKLLFYDLRGDGAKIQVMSSLEMYESHESFYKIHHLLRRGDIVGIQ 195

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +  ++I ILS     LP   +G +   +  R++ R+LDL
Sbjct: 196 GFPGKSK---------KGELSIFPRRITILSPCLHMLPKAHYGLKL--QDTRYRQRYLDL 244

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              D   K    R +IIN +R  +    F+E  TP++   +    A+ F+        + 
Sbjct: 245 ILNDETRKVFEIRAKIINFIRHFLDTRRFLEVETPMMNMIAGGATAKPFVTYHNDLHMNL 304

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y +  AP+ Y + L+  G DR +++   FR+E       P EF   +  M++ + +D++ 
Sbjct: 305 Y-MRVAPELYLKQLVIGGLDRVYEVGRQFRNEGIDLTHNP-EFTSCEFYMAYADYNDLMT 362

Query: 252 TMENVLRGVFEEFS 265
             E +   + +E S
Sbjct: 363 MTEELFSSMVKEIS 376



 Score = 42.4 bits (98), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L    N++EV LFP
Sbjct: 545 AMEYGLPPTGGWGCGIDRLAMFLSNKFNIKEVLLFP 580


>gi|295089868|emb|CBK75975.1| asparaginyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 463

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 107/266 (40%), Gaps = 34/266 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
           +G  +R+ GWV  VR      F+ + D  ++   QVV + +   F EI+K      +L  
Sbjct: 17  LGKEIRIGGWVRSVRDSKTFGFIVVSDGSYFETLQVVYHDNMENFNEISKLNVGAAILVK 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP-LPVFGEREYPESIRFKYRFLD 132
             LV +  A+               Q  E+L      P  P+  +R   E +R     L 
Sbjct: 77  GTLVATPEAKQ----------PFEIQATEVLVEGASSPDYPLQKKRHSLEYLR-TISHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VP 183
            R +T       R+ I  ++       +F+   TP++T S  EGA +           VP
Sbjct: 126 PRTNTFQAVFRVRSLIAYAIHQYFQERDFVYVHTPLITGSDCEGAGEMFQVTTMDLANVP 185

Query: 184 SRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            + + GS      F+  P       QL     A  F   +   P FR E+  + R   EF
Sbjct: 186 -KASDGSVDFSQDFFGKPTNLTVSGQLNAETYAMAFRNVYTFGPTFRAENSNTTRHAAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGV 260
           + ++ EM+F + +D +   E++L+ V
Sbjct: 245 WMIEPEMAFADLNDNMALAESMLKYV 270



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E +L     +G+ KE     +G      + G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDYEKLLARMDELGLKKE----DYGFYLDLRKYGSVRHSGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMGNIRDVIPFPRTVNNCEL 463


>gi|293389907|ref|ZP_06634241.1| asparaginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290950441|gb|EFE00560.1| asparaginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 467

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 107/268 (39%), Gaps = 32/268 (11%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +G  V + GWV   R    G+ FL + D   +   Q + N D A +E      SE +   
Sbjct: 17  IGEKVTVRGWVRTRRDSKAGLSFLAVYDGSCFAPIQTIVNNDIANYE------SEVLRLT 70

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLD 132
            G  +  +   + +      +EL A+K+E+    E+    P+  +R    SI +      
Sbjct: 71  AGCSVVVTGTVVESPAEGQAVELQAEKVEVTGWVEDPETYPMAAKRH---SIEYLREVAH 127

Query: 133 LRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T     V R R  +  ++      + F   +TP++TAS  EGA +    S ++  +
Sbjct: 128 LRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLEN 187

Query: 191 FYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGE 233
                +    + Q        L  SG            + +   P FR E+  + R   E
Sbjct: 188 LPRTDKGAVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAE 247

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVF 261
           F+ ++ E++F    D     E++L+ VF
Sbjct: 248 FWMIEPEVAFATLADNAKLAEDMLKYVF 275


>gi|198428712|ref|XP_002119984.1| PREDICTED: similar to asparaginyl-tRNA synthetase 2
           (mitochondrial)(putative) [Ciona intestinalis]
          Length = 471

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/305 (20%), Positives = 122/305 (40%), Gaps = 63/305 (20%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           + GWV  +R H   +F+DI D   +  +     S  F              +G  +S + 
Sbjct: 36  IQGWVQSIRKHKNFMFVDIVDGTSLNPLQVVLPSHMFNSQLQ---------NGAAVSANG 86

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
             +  ++   +IE+  ++I+++   +    P    +  P  ++    +  LR        
Sbjct: 87  TFVETDLNVNKIEMVCEEIQVVGPCDPETYPFL--KHTPHDMQHLRSYPHLR-------- 136

Query: 143 VKRTRIINSMRCR----------MIAENFIECSTPILTASSPEGARD-FLVPSRV----- 186
           ++RT +IN+ + R             E F    TPI+T S  EGA + F + S       
Sbjct: 137 MRRTSMINAFKLRNQLEMLFHEFFQNEGFTHVHTPIITLSDCEGAGELFSIKSDTSTNTD 196

Query: 187 ---NQGSFYALPQAPQQYKQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              ++  F+  P       Q+ +   A      + ++P FR E   S +   EF  L++E
Sbjct: 197 MENSENHFFNKPAYLTVSGQMHLEACAMSLGSVYTLSPVFRAEHGISRKHLSEFRMLEVE 256

Query: 241 MSFVEQ-DDILNTMENVLRGVFE--------EFSNG-------------NTVSNNFLRIC 278
           ++F +   +IL+ +E+ ++   E        +F +G             N   +N++RI 
Sbjct: 257 VAFTQDLHEILDLIEDSIKFCIERVQSVPLKKFDDGYKDIPPQHHKAVKNATCSNYVRIP 316

Query: 279 YDDAI 283
           Y +A+
Sbjct: 317 YSEAL 321



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R H  E++  +    G++++  E       R F  G  PHGG   G DR+V  
Sbjct: 394 EICGGSLREHRLELLQDSLRTSGLNEKDYEWYLD--LRRF--GSAPHGGYGLGFDRLVHF 449

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           LLG +N+++   FP + + C L
Sbjct: 450 LLGTRNIKDAVPFPRTPHSCPL 471


>gi|255994120|ref|ZP_05427255.1| lysine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993788|gb|EEU03877.1| lysine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 507

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 127/292 (43%), Gaps = 31/292 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74
           G  V  +G +   R  G   F+DI+D  G  Q     D      +E+ K+     ++ + 
Sbjct: 64  GKEVSCAGRIMANRHMGKASFIDIKDKLGRIQCYIRQDEITPEEYEVFKTYDIGDIVGVK 123

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
           G V              G+I +    I +LS + + LP    G ++  + +R++ R++DL
Sbjct: 124 GSVFKTRH---------GEISIRVSDIALLSKSLQVLPDKFKGLKD--QDLRYRQRYVDL 172

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTA-SSPEGARDFLVPSRVNQG 189
              D +     KR  II  +R R + ++  F++  TP+LT  +    AR F         
Sbjct: 173 IVNDDVADTFRKRAAIIKEIR-RYLEDDRGFLDVDTPVLTTIAGGANARPFNTHHNTLDL 231

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  + + Y + L+  G DR +++   FR+E    +  P EF  +++  ++ + D +
Sbjct: 232 DM-KLRISNELYLKRLIVGGLDRVYEMGKMFRNEGMDRNHNP-EFTSMELYQAYGDMDTV 289

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           ++  EN++  V E+ +    ++           + RI   DA++++  +  D
Sbjct: 290 MDITENLIAKVSEKVNGSMKITYQGKEFDLTPPWDRITMVDAVKKWANEDFD 341



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR++ML+  A ++R+V LFP
Sbjct: 462 ALEVGLPPTGGLGIGIDRVIMLITNAASIRDVILFP 497


>gi|212550983|ref|YP_002309300.1| lysyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|254782469|sp|B6YRR7|SYK_AZOPC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|212549221|dbj|BAG83889.1| lysyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 500

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 119/253 (47%), Gaps = 20/253 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F++++D  G  Q+    DS C    K +   + +    L+   
Sbjct: 50  VSVAGRMMSRRIMGKVSFVELQDSVGRIQLYIKCDSLCPNENKDL---YYIVFKKLLDIG 106

Query: 81  SAETINANII---TGQIELSAQKIEILSVAEELPLPVFGERE------YPE-SIRFKYRF 130
               I   +    TG+I +    + +LS +   PLP+   ++      Y +  +R++ R+
Sbjct: 107 DFIGIKGYVFCTQTGEISIHVNSLTLLSKSLR-PLPIVKSKDGMTYDSYNDVELRYRQRY 165

Query: 131 LDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVN 187
           +DL  +   K+I +KRT+I NS+R     + +IE  TP+L  S P G  AR F+      
Sbjct: 166 VDLIVNEGTKDIFLKRTKIFNSVRSFFNEKGYIEVDTPVL-QSIPGGAAARPFVTHHNAL 224

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A + Y + L+  GF+  ++ +  FR+E       P EF  +++ +S+ +  
Sbjct: 225 DIPCY-LRIANELYLKRLIVGGFEGVYEFSRNFRNEGIDKVHNP-EFTVVEVYVSYKDYK 282

Query: 248 DILNTMENVLRGV 260
            ++N  E +L  +
Sbjct: 283 WMMNFTEQMLEHI 295



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 10/90 (11%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSN-VGISKE------VVENRFGGLYRAFQCGM 533
           +++L+ NGFE+A+     +      + F + + +SK+       ++  F    RA + GM
Sbjct: 405 RFELIVNGFELANAYSELNDPIDQRKRFEDQLKLSKKGDNEAMFIDQDF---LRALEYGM 461

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           PP  G+  G+DR+VMLL    +++EV LFP
Sbjct: 462 PPTSGMGIGMDRLVMLLTKQTSIQEVLLFP 491


>gi|88803560|ref|ZP_01119085.1| lysyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88780572|gb|EAR11752.1| lysyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 564

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 112/252 (44%), Gaps = 18/252 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +  +   G   F  ++D  G  QV  N D  C    KS+ +E       L+
Sbjct: 46  GKQVTIAGRLMAINIQGKASFAQLQDGEGRIQVYFNRDEICLGEDKSLYNE---VFKKLL 102

Query: 78  MSRSAETINANIITGQI---ELSAQKIEILSVA-EELPLP------VFGEREYPESIRFK 127
                  I   + T Q+    +  ++ ++LS A + LP+P       F     PE +R++
Sbjct: 103 DLGDFLGITGTLFTTQVGEKTVMVKEFKLLSKALKPLPMPKIKDGVTFDAFTDPE-MRYR 161

Query: 128 YRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R+ DL  +   K + +KRT++ N+MR       + E  TP+L        AR F+    
Sbjct: 162 QRYADLVVNPHVKEVFIKRTKLFNAMRSFFNDAGYFEVETPVLQPIPGGAAARPFITHHN 221

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +S+ +
Sbjct: 222 SLDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVSYKD 279

Query: 246 QDDILNTMENVL 257
            + +++  E +L
Sbjct: 280 YNWMMDFAEQLL 291



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 455 RALEYGMPPTSGMGIGMDRLIMFLTNNQSIQEVLFFP 491


>gi|115352206|ref|YP_774045.1| lysyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|172061073|ref|YP_001808725.1| lysyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|122322758|sp|Q0BDR2|SYK_BURCM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238689175|sp|B1YT20|SYK_BURA4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|115282194|gb|ABI87711.1| lysyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|171993590|gb|ACB64509.1| lysyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 508

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 130/314 (41%), Gaps = 42/314 (13%)

Query: 6   THSCGDLGV----SDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL      SD  +       V ++G +   R  G   F  ++D  G  Q    P+
Sbjct: 43  THHAADLQATFADSDKAALEANPVEVSVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPN 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + + +W L   G +++        N   G++ +  +++ +LS A   PLP  
Sbjct: 103 DVGAETYDAFK-KWDL---GDIVAARGVLFRTN--KGELSVQCKELRLLSKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                 + +R++ R++DL      RDT       RTR I S+R  M   +F+E  TP+L 
Sbjct: 156 FHGLADQEMRYRQRYVDLIVTPETRDTFRA----RTRTIASIRKFMDNADFMEVETPMLH 211

Query: 171 A-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRS 227
                  A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   PR 
Sbjct: 212 PIPGGAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRH 270

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRIC 278
           +    EF  ++   ++ +   +++  E ++R    +     T+         +  F R+ 
Sbjct: 271 N---PEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFHRLT 327

Query: 279 YDDAIRRYGTDKPD 292
              AI++Y     D
Sbjct: 328 ITQAIQKYAPQYTD 341



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFMTGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMFFDADYIRALEHGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|329117573|ref|ZP_08246290.1| lysine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907978|gb|EGE54892.1| lysine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 500

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 125/286 (43%), Gaps = 28/286 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D+     ++G +   R  G + F  ++D  G  Q+    D+     ++I K       
Sbjct: 60  LHDLNETAIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDAVGEENYDIFKKADLGDF 119

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           + ++G VM             G++ + A K+  LS +   PLP  F      E+I ++ R
Sbjct: 120 IGVEGEVMRTD---------MGELSIKATKLTHLSKSLR-PLPEKFHGLTDIETI-YRKR 168

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            LDL   R++  +  V R+++I+ +R  +   +F+E  TP+L   +   A    V     
Sbjct: 169 HLDLISNRESFDR-FVTRSKMISEIRRYLDGMDFLEVETPVLHNEAGGAAARPFVTHHNA 227

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 228 QNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADYQ 286

Query: 248 DILNTMENVLR---------GVFEEFSNGNTVSNNFLRICYDDAIR 284
           DI+N  E +++         G  +   N   ++  F R+   DAI+
Sbjct: 287 DIMNLTEGIIQHAANAVKGDGPIDYQGNEILINQPFKRVHMVDAIK 332



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 435 LSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVL 494

Query: 561 LFP 563
           LFP
Sbjct: 495 LFP 497


>gi|319936968|ref|ZP_08011378.1| lysyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807904|gb|EFW04483.1| lysyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 642

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 120/279 (43%), Gaps = 28/279 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
           V+++G +   R  G + F+ I+D  G  Q+    D      +E+        ++ I+G V
Sbjct: 60  VKIAGRIMTKRRKGKVCFMHIQDRDGQIQIYVRKDVIGEDEYEVLIKSDIGDIVGIEGTV 119

Query: 78  MSRSAETINANIITGQIELSAQK-IEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
              +         TG++ +   K I +      LP    G  +  E  R++ R++DL  +
Sbjct: 120 FVTN---------TGELSVKVAKFIHLTKALRPLPEKYHGLSDVEE--RYRRRYVDLIMN 168

Query: 137 TLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
              + I   R +II S++  + ++ ++E  TP+L        AR F         +FY L
Sbjct: 169 EESRKIAFARPKIIRSIQNFLDSQGYVEVETPVLNPILGGAAARPFTTHHNALDMNFY-L 227

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A +   + L+  G D  ++I   FR+E       P EF  +++  +F + + +++  E
Sbjct: 228 RIATELSLKRLIVGGMDAVYEIGRLFRNEGMDRTHNP-EFTTIEVYKAFSDLEGMMDLTE 286

Query: 255 NVLR-------GVFEEFSNGNTVS--NNFLRICYDDAIR 284
            ++        G ++    GN +S    F RI   DAI+
Sbjct: 287 GIISNAAMSVCGTYDLEYKGNKISLAPGFKRISMTDAIK 325



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 29/41 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + G+PP GG+  GIDR+VMLL G +++REV LFP  +  
Sbjct: 454 ALEYGLPPTGGMGMGIDRLVMLLTGQESIREVILFPTMKTL 494


>gi|15922404|ref|NP_378073.1| lysyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|15623193|dbj|BAB67182.1| 444aa long hypothetical lysyl-tRNA synthetase [Sulfolobus tokodaii
           str. 7]
          Length = 444

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 15/243 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +  +G V  +R HG I F+DI D     Q+    +    E+ +     + +   G ++  
Sbjct: 4   ISTAGRVANIRRHGKISFVDIFDEGEKLQLQLRVN----ELGEKYDKFFEIVDRGDIIGV 59

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139
             + +    I G++ L  +   +L  A+ L  P    +  PE  R+ +R++D L  D   
Sbjct: 60  KGDLLYT--IKGELTLRIKDYTML--AKSLIEPPDWSKLSPE-FRYAHRYVDFLYNDNAR 114

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--QGSFYALPQA 197
           K +  R  II  +R  + ++ FIE  TPIL      GA      S VN  +  +Y L  +
Sbjct: 115 KAMEIRFLIIRLIREYLYSKGFIEVETPILQPVYG-GALAKPFKSHVNYLEEDWY-LRIS 172

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + Y +  +  GF++ F+I   FR+ED      P EF  +++  ++ + +DI+   E++L
Sbjct: 173 LELYLKRFIVGGFNKVFEIGKVFRNEDIDVTHNP-EFTLMELYWAYADYNDIMRLTEDML 231

Query: 258 RGV 260
           + V
Sbjct: 232 QYV 234



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA   GMPP GG+  GIDR+VMLL    +++EV  FPM
Sbjct: 398 RALSYGMPPTGGLGIGIDRLVMLLTNNYSIKEVIPFPM 435


>gi|319943697|ref|ZP_08017978.1| lysine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319742930|gb|EFV95336.1| lysine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 513

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 127/288 (44%), Gaps = 32/288 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q+  N D    E A      W L   G +++ 
Sbjct: 77  VSVAGRMVLKRVQGKASFATLQDATGRIQLWMNDDGVGAE-AHDAFKHWDL---GDIVA- 131

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
            AE        G++ +    + +L+ +   PLP        + +R++ R++DL   ++  
Sbjct: 132 -AEGTLFKTKKGELSIRCNMVRLLTKSLR-PLPDKFHGLADQEMRYRQRYVDLMSNESTR 189

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA-- 197
           +  + R++ I ++R  M+    +E  TP+L    P GA      +R  Q    AL QA  
Sbjct: 190 QTFIIRSKAIAAIRQFMVDNGCLEVETPMLQ-PIPGGAT-----ARPFQTHHNALDQAMF 243

Query: 198 ----PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
               P+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  
Sbjct: 244 LRIAPELYLKRLIVGGFERVFEINRNFRNEG-LSPRHNPEFTMMEFYAAYTDCRWMMDYT 302

Query: 254 ENVLRGVFEEFSNGNTV----------SNNFLRICYDDAIRRYGTDKP 291
           E V+R    + + G+TV          S  F R+   +AIR +  + P
Sbjct: 303 EQVIRHA-AQAARGSTVLEYQGRPVDLSKPFARLTIVEAIRTHAPELP 349



 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E A+G    +  E   + F     +KE  ++    +   Y RA + GMPP 
Sbjct: 421 RFELFMTGREFANGFSELNDPEDQAERFRKQVEAKEAGDDEAMYYDADYIRALEYGMPPT 480

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG+  GIDR++MLL  +  +R+V LFP
Sbjct: 481 GGVGIGIDRLMMLLTDSPTIRDVILFP 507


>gi|154305343|ref|XP_001553074.1| hypothetical protein BC1G_08966 [Botryotinia fuckeliana B05.10]
 gi|150853708|gb|EDN28900.1| hypothetical protein BC1G_08966 [Botryotinia fuckeliana B05.10]
          Length = 524

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI +GG R H +E + +     G+  E +     G    F+ G PPH G   
Sbjct: 84  FDIFMRGQEILTGGQRIHDAEFLEKRMKQKGVKPESMSEYLEG----FRWGAPPHAGCGI 139

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+  L L   N+R  SLFP
Sbjct: 140 GLERLTYLFLSLGNIRLASLFP 161


>gi|148653258|ref|YP_001280351.1| lysyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|229559862|sp|A5WFG0|SYK_PSYWF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|148572342|gb|ABQ94401.1| lysyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 510

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 15/175 (8%)

Query: 125 RFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFL 181
           R++ R LDL  +   +N  + R+++I+ +R  M+ E F+E  TP++    P GA  R F+
Sbjct: 170 RYRNRHLDLMTNESSRNTFMIRSQVISGIRKFMLNERFMEVETPMM-HPIPGGAVARPFI 228

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   
Sbjct: 229 THHNALDMPLY-LRIAPELYLKRLVVGGFERVFEINRSFRNEGVSTRHNP-EFTMIEFYQ 286

Query: 242 SFVEQDDILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIRRYG 287
           ++ +  D+++  E +         G  E      T+S    F R+   DAI +Y 
Sbjct: 287 AYADYKDLMDLTERLFNQLAMDILGTTELTYQEETISLKAPFARLSMTDAIAQYA 341



 Score = 43.9 bits (102), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +      + F N    K+  ++    F   Y  A   G+PP 
Sbjct: 418 RFELFIGGREIANGFSELNDPADQAERFHNQVAEKDAGDDEAMHFDADYIEALAYGLPPT 477

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML   A ++R+V LFP
Sbjct: 478 AGEGIGIDRLVMLFTDAASIRDVILFP 504


>gi|317051283|ref|YP_004112399.1| asparaginyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946367|gb|ADU65843.1| asparaginyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 448

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 113/268 (42%), Gaps = 38/268 (14%)

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANII----TGQ-IELSAQKIEILS 105
           +A  D +CFE +  + SE        + + +A   + +++    TGQ  EL AQ IEI  
Sbjct: 37  IAINDGSCFE-SLQIISELPADQTADISTGTALRCHGHVVPSPGTGQQWELQAQSIEITG 95

Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
            A E   P+  +R   E +R     L  R +T +     R+ + +++        F    
Sbjct: 96  EAPE-SYPLQKKRHSLEFLR-GLPHLRPRSNTFNAVFRLRSSLSHAIHRYFADLGFHWVQ 153

Query: 166 TPILTASSPEGARDFLVPSRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQI 216
           TPI+TA+  EGA +    + +  G       F+  P +     QL     A+   R +  
Sbjct: 154 TPIITANDCEGAGEQFRVTTLPAGDTHMEQDFFGRPASLTVSGQLEGEAFATALGRIYTF 213

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN----VLRGVFEEFSN------ 266
            P FR E+  + R   EF+ ++ E++F + DDI+   E+    ++R V + F+       
Sbjct: 214 GPTFRSENSNTSRHLAEFWMVEPEVAFADLDDIMALAEDFVQSMVRHVCDTFAAELAFFE 273

Query: 267 -----------GNTVSNNFLRICYDDAI 283
                        T + +F RI Y  AI
Sbjct: 274 QHMEKGLLQKLQQTTAGSFARITYTQAI 301


>gi|237807864|ref|YP_002892304.1| asparaginyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237500125|gb|ACQ92718.1| asparaginyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 466

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 120/301 (39%), Gaps = 41/301 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV----RS 67
           G   VG+ + + GW+   R    GI FL I D             +CF   ++V     S
Sbjct: 12  GKYAVGTTLTVKGWIRTRRDSKAGISFLAIHD------------GSCFAPVQAVVPNTLS 59

Query: 68  EWVLCIDGLVMSRSAET---INANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPE 122
            +   +  L  S S E    I A+  TGQ  E+ A  + +L   E+    P+  +R   E
Sbjct: 60  NYESDVLRLTTSCSVEVTGVIQASAGTGQQFEILADSVTVLGFVEDPDTYPMAPKRHSVE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R ++  L +R + +      R  I  ++      E F+  +TP++TAS  EGA +   
Sbjct: 120 YLR-EHAHLRVRTNMMGAVTRVRNCIAQAIHRFFHDEGFMWIATPLITASDCEGAGEMFR 178

Query: 183 PSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDP 225
            S ++  +     +    Y Q        L  SG            + +   P FR E+ 
Sbjct: 179 VSTLDMENLPRTDKGSIDYNQDFFGKEAFLTVSGQLNLETYACAMSKVYTFGPTFRAENS 238

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD-DAIR 284
            + R   EF+ ++ E++F + +D     E +L+ VF    N       F     D DAI 
Sbjct: 239 NTSRHLAEFWMVEPEIAFADLNDNAAMAEKLLKYVFSAVLNERRDDMEFFAERVDKDAIT 298

Query: 285 R 285
           R
Sbjct: 299 R 299


>gi|78355146|ref|YP_386595.1| asparaginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123755034|sp|Q317J6|SYN_DESDG RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|78217551|gb|ABB36900.1| asparaginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 461

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 107/275 (38%), Gaps = 28/275 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  S     +R+ GWV   R   G  FL++ D   +T  QV+ + ++  +   
Sbjct: 3   RTQILDALNASAPCDDIRICGWVRTRRDAKGFSFLELNDGSCLTNIQVIVDEETDAYRSV 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYP 121
               +   + I G ++    +        GQ  E+ A  + +L  A+    P+  +R   
Sbjct: 63  GEATTGASVDIRGQLVESPGK--------GQKWEVRAATMTLLGKADPETFPLQKKRHSD 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R     L  R +        R     ++        F    TPILT S  EGA +  
Sbjct: 115 EYLR-TIAHLRPRTNKFGAAFRIRAEASYAVHSFFRENGFFNVHTPILTGSDCEGAGEMF 173

Query: 182 ----VPS---------RVNQGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
               +P+          V  G F+          Q +  +MA    + +   P FR E+ 
Sbjct: 174 RVTTLPAVGASAPAEGSVFDGDFFGKECSLTVSGQLEAEIMAQSLGKVYTFGPTFRAENS 233

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            + R   EF+ ++ EM+F + +D +   E++++ V
Sbjct: 234 NTPRHAAEFWMVEPEMAFADLEDDMQLAEDMVKYV 268


>gi|302037376|ref|YP_003797698.1| lysyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300605440|emb|CBK41773.1| Lysyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 493

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 2/163 (1%)

Query: 125 RFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           R++ R++DL  +  +H+    R+RI++ +R  +I   F+E  TP++       A    V 
Sbjct: 155 RYRQRYVDLIANPQVHQIFALRSRIVSGIRAFLIERGFLEVETPMMHPIPGGAAAKPFVT 214

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                G+   L  AP+ Y + L+  GF R F+I   FR+E   +   P EF  L+  +S+
Sbjct: 215 HHNALGAELYLRIAPELYLKRLIVGGFPRVFEINRNFRNEGISTIHNP-EFTMLEFYVSY 273

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
            +  D++   E +   + ++     T+      I      RR+
Sbjct: 274 ADYHDLIVLTEELFGRLAQDILGTTTIDYQGTHINLGSPWRRW 316



 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VML     ++R+V LFP
Sbjct: 451 RALEYGMPPTAGEGIGIDRLVMLFTNQSSIRDVVLFP 487


>gi|309778096|ref|ZP_07673034.1| lysine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914155|gb|EFP59957.1| lysine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 508

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 30/287 (10%)

Query: 2   HRY-RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           H Y RTH  G++           + +    V+++G +   R  G   F+ I+D  G  Q+
Sbjct: 43  HAYQRTHKSGEIRAAYENCTKEELEEQDLTVKIAGRIMTKRRQGKAGFMHIQDIDGQIQI 102

Query: 51  VANPD---SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
               D      +EI K      ++ I+G VM  +          G++ + A+    L+ A
Sbjct: 103 YVRKDVIGEEAYEIFKKSDLGDIVGIEGKVMKTNH---------GELSVKAEVYTHLTKA 153

Query: 108 -EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECS 165
              LP    G ++  E  RF+ R++DL  +   K I + R RII +++  +  E  +E  
Sbjct: 154 LRPLPEKYHGLQDVEE--RFRRRYVDLITNENSKRIALTRPRIIRAIQNYLDGEGLVEVE 211

Query: 166 TPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
           TP+L        AR F+         FY L  A +   + L+  G +  ++I   FR+E 
Sbjct: 212 TPVLQPILGGASARPFITHHNTLDMPFY-LRIATELPLKRLIVGGLEGVYEIGRLFRNEG 270

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
             +   P EF  ++  +++ + + +++ +E +L  V E+      ++
Sbjct: 271 MDATHNP-EFTTVEAYVAYSDLNGMMDLVEGLLNHVAEKVCGTTEIA 316



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG+  GIDR+VMLL  ++ +REV LFP  +N
Sbjct: 468 ALEYGLPPTGGVGLGIDRLVMLLTNSQTIREVLLFPHMKN 507


>gi|109897686|ref|YP_660941.1| lysyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|109699967|gb|ABG39887.1| lysyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 517

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 117/264 (44%), Gaps = 18/264 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            + ++G  V ++G +   R      FL ++D  G  Q  A+ D+      K +++ +   
Sbjct: 55  ALEELGKVVSIAGRILAKRGP----FLLLQDMTGRIQAYASKDTQ-----KDIKARYTSL 105

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G ++    E   +    G + ++  + ++L+ +   PLP        +  +++ R++D
Sbjct: 106 DIGDIIGVKGELHKSG--KGDLYVNMNEYQLLTKSLR-PLPEKFHGLADQETKYRQRYVD 162

Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQG 189
           L       +  + R++I+  +R  +    F+E  TP+L    P GA  + F         
Sbjct: 163 LITNQQTRETFMIRSKIVTGIRNFLSERKFMEVETPMLQVI-PGGATAKPFNTHHNALDI 221

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  L+   ++ +  D+
Sbjct: 222 DMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMLEFYQAYADYQDL 279

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN 273
           +N  E +LR V ++      V N 
Sbjct: 280 MNLTEEMLRTVAQDVLGTAIVKNT 303



 Score = 44.3 bits (103), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 11/91 (12%)

Query: 484 LVCNGFEIASGG--IRNHMSEVMLQAFSNVGISKEVVENRFGG---------LYRAFQCG 532
            V + FE   GG  + N  SE+           K+V E   G            RA + G
Sbjct: 415 FVTDRFEFFVGGRELANGFSELNDSEDQEARFRKQVAEKDAGDDEAMHFDDDYIRALEYG 474

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +PP  G   GIDR+VML   +  +++V LFP
Sbjct: 475 LPPTAGEGIGIDRLVMLFTDSPTIKDVILFP 505


>gi|306825318|ref|ZP_07458660.1| lysine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304432754|gb|EFM35728.1| lysine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 496

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    D+     ++I K       L ++G VM 
Sbjct: 65  IAGRLVTKRGKGKVGFAHLQDRDGQIQIYVRKDTVGDENYDIFKKADLGDFLGVEGEVMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A  I  LS A   PLP  F      E+I ++ R+LDL   R+
Sbjct: 125 TD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVETI-YRKRYLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R++II+ +R  +   +F+E  TP+L   +   A    +     Q     L  
Sbjct: 174 SFDR-FVTRSKIISEIRRYLDGHDFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E +
Sbjct: 233 ALELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTMIEVYQAYADFHDIMDLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|255012440|ref|ZP_05284566.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 468

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 111/272 (40%), Gaps = 36/272 (13%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L     G+ V + GWV   R    + F+ + D   I   Q+V + D    E  
Sbjct: 6   RTKIVDVLKSEAFGTTVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDVDKLGDEFL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYP 121
           K + +   + ++G++     +        GQ +E+ A +IEI   A+    P+   ++  
Sbjct: 66  KPITTGASISVNGILTQSQGK--------GQSVEIQATEIEIFGTADPATYPL---QKKG 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGA-R 178
            S+ F      LR  T     V R R  +  ++        F    TPI+TAS  EGA +
Sbjct: 115 HSMEFLREIAHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQ 174

Query: 179 DFLVPSR-------------VNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRD 222
            F V ++             + +  F+    +     QL   L A+   + +   P FR 
Sbjct: 175 MFQVTTKNLYDLKKDENGSIIYEDDFFGKQASLTVSGQLEGELAATALGQIYTFGPTFRA 234

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           E+  + R   EF+ ++ E++F   +DI + ME
Sbjct: 235 ENSNTPRHLAEFWMIEPEVAF---NDITDNME 263


>gi|170726573|ref|YP_001760599.1| asparaginyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|169811920|gb|ACA86504.1| asparaginyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 466

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 107/278 (38%), Gaps = 50/278 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           +GS V + GWV   R    GI FL + D             +CF+  + V          
Sbjct: 16  IGSQVTVRGWVRSRRDSKAGISFLAVYD------------GSCFDPIQGVVPNSLANYND 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + E +++       EL   ++E+    E+    P+  +R   E +R 
Sbjct: 64  EILKLTAGCSVVMTGEVVDSPGKGQAFELQVTQVEVAGWVEDPDTYPMAAKRHSIEHLR- 122

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      E FI  STP++TAS  EGA +     
Sbjct: 123 --ELAHLRPRTNIIGAVARVRNSLSQAIHRFYNEEGFIWVSTPLITASDCEGAGEMF--- 177

Query: 185 RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDED 224
           RV+      LP+  +                    Q      AS   + +   P FR E+
Sbjct: 178 RVSTLDMENLPRTDEGKVDYSEDFFGKESFLTVSGQLNAETYASALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             + R   EF+ ++ E++F + DD+    E +L+  F+
Sbjct: 238 SNTSRHLAEFWMVEPEVAFADLDDVAGLAEQMLKFCFK 275


>gi|42523785|ref|NP_969165.1| lysyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|39575992|emb|CAE80158.1| lysyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
          Length = 504

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 124/288 (43%), Gaps = 32/288 (11%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQV------VANPDSACFEIAKSVRSEWVLCIDG 75
           R++G +  +R  G   F +++D  G  QV      ++  D   FE+   V    ++ I+G
Sbjct: 72  RIAGRLMTLRMMGKASFFNLQDQTGSVQVYVKTEELSEQDRMAFEL---VDLGDIVGIEG 128

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLR 134
            V              G+  + A+  +IL+   E LP    G ++    I++++R LDL 
Sbjct: 129 FVFKSQK---------GEFSIYAKSFQILTKTIEPLPEKFHGVQDI--EIKYRHRHLDLM 177

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFY 192
            D   + + + R++II  +R  +    F+E  TP L        A  F    +      Y
Sbjct: 178 TDADSRKVFETRSKIIKEVRRFLDDRGFMEVETPTLQPVYGGAAATPFTTHHKALDMKLY 237

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG----EFYQ--LDMEMSFVEQ 246
            +  +P+ Y + L+  GF++ ++I+  FR+E       P     EFY+   D      + 
Sbjct: 238 -MRISPELYLKRLIVGGFEKVYEISKNFRNEGIDRTHNPEFALLEFYEAYTDYNYQMKQF 296

Query: 247 DDILNTMENVLRGVFEEFSNGNTV--SNNFLRICYDDAIRRYGTDKPD 292
           +++++++   + G  +    G  +  +  + R+   + ++ Y    PD
Sbjct: 297 EELISSLALKITGSMKVTYQGKEIDFTPPWRRLTVHEGVKEYAGIDPD 344



 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP GG+  GI+RIVMLL    ++R++  FP
Sbjct: 463 AIDAGMPPTGGVGIGIERIVMLLTDRPSIRDIIFFP 498


>gi|313232355|emb|CBY09464.1| unnamed protein product [Oikopleura dioica]
          Length = 554

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 116/279 (41%), Gaps = 21/279 (7%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           S + ++ W+HR+R  G  ++FL +RD  G  Q V          A  ++ E  + + G  
Sbjct: 132 SRITVNAWIHRIRRQGNNLMFLVVRDGTGYLQCVLTDKLCQTYDALVLQPEATVELHG-K 190

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    E  NA    G  EL     ++++ A    +     +E      F  R L +R + 
Sbjct: 191 LEAVPEGKNAE---GGHELKVDFWKMIANAPPGGVENVVNKEADPDTLFDNRHLVIRGEK 247

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
             K +  R+ ++ + R    A  + E + P L  +  EG           + ++  L Q+
Sbjct: 248 TSKILKIRSHLMQAFREHYFARGYHEVTPPCLVQTMCEGGSTLFKFDYFGEEAY--LTQS 305

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  M +  D  F +A  +R E  R+ R   E+  ++ E  F+  + +L+ +E++L
Sbjct: 306 SQLYLETCMPALGD-VFCMAESYRAEKSRTRRHLSEYTHVEAECPFITFEQLLDRIEDLL 364

Query: 258 -------------RGVFEEFSNGNTVSNNFLRICYDDAI 283
                        + V++   N       F+R+ Y DAI
Sbjct: 365 VDVIDRLLKSPAGQYVYDLHPNFVPPKKPFMRMDYKDAI 403


>gi|260775419|ref|ZP_05884316.1| lysyl-tRNA synthetase (class II) [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608600|gb|EEX34765.1| lysyl-tRNA synthetase (class II) [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 505

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 112/228 (49%), Gaps = 18/228 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWV-LCIDGLVMSRSAETINANIITGQIEL 96
           FL I++  G  Q  A  D     + K ++ ++  L I  ++  + A   +     G + +
Sbjct: 81  FLAIQETSGRIQAYAAKD-----VQKELKEKYQGLDIGDIIGVKGALHKSGK---GDLYV 132

Query: 97  SAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRC 154
           + +  E+L+ A   PLP        + +R++ R++DL   +D+    I+ R+++++++R 
Sbjct: 133 NMESYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNQDSREAFII-RSKLVSAIRN 190

Query: 155 RMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
            M ++ ++E  TP++    P GA  R F+          Y L  AP+ Y + L+  GFDR
Sbjct: 191 FMSSKGYLEVETPMMHVI-PGGATARPFITHHNALDIDMY-LRVAPELYLKRLVVGGFDR 248

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            F+I   FR+E   S R   EF  ++   ++ +  D+++  E +L  V
Sbjct: 249 VFEINRNFRNEG-LSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTV 295



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ ML      +R+V LFP
Sbjct: 464 ALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFP 499


>gi|229015479|ref|ZP_04172478.1| Lysyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229021688|ref|ZP_04178271.1| Lysyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228739624|gb|EEL90037.1| Lysyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228745822|gb|EEL95825.1| Lysyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 499

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 140/330 (42%), Gaps = 50/330 (15%)

Query: 5   RTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RT+S  DL VS  G F           V ++G +   R  G   F  I+D  G  Q+   
Sbjct: 37  RTNSTTDL-VSLYGEFSKEELEEKEITVSIAGRIMTKRGKGKAGFAHIQDLQGQVQIYVR 95

Query: 54  PDSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EE 109
            D+     +E+  +     ++ I+G V   +          G++ + A    +L+ +   
Sbjct: 96  KDTVGDEEYELFTTADLGDLVGIEGKVFKTNV---------GELSVKATGFTLLTKSLRP 146

Query: 110 LPLPVFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           LP    G ++  +  R++ R+LDL      R+T     V R++II  MR  +    ++E 
Sbjct: 147 LPDKYHGLKDVEQ--RYRQRYLDLITSMESRETF----VTRSKIIREMRRYLDDNGYLEV 200

Query: 165 STPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP++ A +    AR F           Y +  A + + + L+  G ++ ++I   FR+E
Sbjct: 201 ETPMMHAIAGGASARPFTTHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NF 274
              +   P EF  +++  ++ + +DI+   EN++  + ++     T+            +
Sbjct: 260 GVSTRHNP-EFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEINLEPEW 318

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            R+   DAI+++     D  NP+ +    E
Sbjct: 319 TRLHMVDAIKQHSG--ADFWNPMSVEEARE 346



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|223998046|ref|XP_002288696.1| lysyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220975804|gb|EED94132.1| lysyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 502

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 115/252 (45%), Gaps = 15/252 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + ++G +   R  G + F  ++D  G+ Q+  +        A S ++       G ++  
Sbjct: 59  IAVAGRIMARRVFGKLAFYTLQDETGVIQLQFDKKRLGERDADSFKNLKAWTDSGDIIGA 118

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----RR 135
                  +   G++ L A +  +L+ +  LPLP         S R++ R LDL      R
Sbjct: 119 KGTIRRTD--KGELTLYATEWTMLTKSA-LPLPDKYHGLTDISKRYRNRHLDLIVNPSVR 175

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF-YAL 194
           DT +K    R +I +S+R ++ A+ F+E  TP+L  + P GA      +  N       L
Sbjct: 176 DTFYK----RAKITSSLRRQLDAKGFLEIETPVL-HTQPGGAEAKPFETYHNTMDMDLTL 230

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  GF R +++   FR+E   +   P EF  +++  ++ +  D+++  E
Sbjct: 231 RIATELHLKRLIIGGFPRVYELGRIFRNEGISTRHNP-EFTSVELYQAYADYHDMMDLTE 289

Query: 255 NVLRGVFEEFSN 266
            ++ G+  E S+
Sbjct: 290 ELVCGMANEVSD 301



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 461 ALEQGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPL 497


>gi|154278074|ref|XP_001539861.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150413446|gb|EDN08829.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 756

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 32/254 (12%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--LCIDGLV----MSRSAETINANI 89
           + FL +R      Q V    SA  EI++ +  +W+  + ++ +V    + + AE    + 
Sbjct: 317 LAFLMLRQQGKKMQAVV---SASDEISRPM-VKWIGGINVNSIVKVTAVVKKAEIPVTSA 372

Query: 90  ITGQIELSAQKIEILSVAEE-LPLPVF-GEREYPES-----------IRFKYRFLDLRRD 136
               +EL  +K+ +++ A   LP+ V   ER  PES           +  K R LD R  
Sbjct: 373 TVKHLELHIRKVYLVAQASHMLPMQVKDAERPPPESVTEEVESEAPYVTLKTR-LDNRVL 431

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIEC-----STPILTASSPEGARDFLVPSRVNQGSF 191
            L     +    I+S   ++  E  ++      STP LTA++ EG       +   + ++
Sbjct: 432 DLQTEASQAITWISSGVAQLFMEYMLKSGSRWISTPKLTANASEGGAGVFEVTYFKRKAY 491

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDIL 250
            A  Q+PQ YKQ+ +A   +  F+I P FR E+  + R   EF  LD E +F     ++L
Sbjct: 492 LA--QSPQLYKQMCIAGDMESVFEIGPVFRAEESNTHRHLTEFVGLDFEKTFQSHYHEVL 549

Query: 251 NTMENVLRGVFEEF 264
              E++L  V  E 
Sbjct: 550 EFAEDLLVFVLSEL 563



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 6/84 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI--SKEVVENRFGGLYRAFQCGMPPHGGI 539
           YD    G EI SG  R + ++ +  A S  G+  + E  E+  G    AF+ G PPH G 
Sbjct: 669 YDFFMRGEEIMSGAQRINEAKELEAAMSAKGLDPNAEGFEDYIG----AFRQGCPPHAGG 724

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             G++RIVM  LG  N+R  +LFP
Sbjct: 725 GLGLNRIVMFFLGLPNIRLATLFP 748


>gi|121605941|ref|YP_983270.1| lysyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120594910|gb|ABM38349.1| lysyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 521

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 84/171 (49%), Gaps = 7/171 (4%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRII 149
           TG++ + A  I +++ +   PLP        + ++++ R++DL  D    K  + R++ +
Sbjct: 147 TGELSIHADSIRLVTKSLR-PLPDKFHGMADQEVKYRQRYVDLIMDEAARKRFMARSKAV 205

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           + +R  M+A +F+E  TP+L    P GA  + F           Y L  AP+ Y + L+ 
Sbjct: 206 SGIREFMVANDFLEVETPMLH-PIPGGANAKPFKTHHNALDQEMY-LRIAPELYLKRLIV 263

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            GF+R F+I   +R+E       P EF  ++   ++    D++   E ++R
Sbjct: 264 GGFERVFEINRSYRNEGISVRHNP-EFTMMEFYAAWWNYTDLMTFTEALIR 313



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR++MLL  + ++R+V LFP
Sbjct: 479 RALEYGMPPTGGCGVGIDRLMMLLTDSPSIRDVILFP 515


>gi|218509745|ref|ZP_03507623.1| lysyl-tRNA synthetase [Rhizobium etli Brasil 5]
          Length = 340

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 12/98 (12%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++  CN +E+ +           R  M E + QA +     K++ E        A   G
Sbjct: 247 RFETYCNAWELGNAFSELNDPEEQRRRMVEQLEQAHARGEKEKQLDEE----FLDAIDQG 302

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR++MLL  A ++R+V LFP  +N  D
Sbjct: 303 MPPAGGLGIGVDRLIMLLTNAPSIRDVILFPARRNKAD 340


>gi|241206404|ref|YP_002977500.1| lysyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860294|gb|ACS57961.1| lysyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 498

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 12/98 (12%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++  CN +E+ +           R  M E + QA +     K++ E        A   G
Sbjct: 405 RFETYCNAWELGNAFSELNDPEEQRRRMVEQLEQAHARGEKEKQLDEE----FLDAIDQG 460

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR++MLL  A ++R+V LFP  +N  D
Sbjct: 461 MPPAGGLGIGVDRLIMLLTNAPSIRDVILFPARRNKAD 498



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 131/287 (45%), Gaps = 26/287 (9%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
            D+   DV   V ++G V+  R  G  +F+DI D  G  Q+ ++ D+   E     R+  
Sbjct: 55  SDVETQDV---VIVAGRVYSSRNSG--MFMDIHDAGGKIQIFSHKDTTPEE----ARALL 105

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            +   G ++  +   I      G++ ++AQ I +L+ +  LP+P          +R++ R
Sbjct: 106 PMIDIGDIIGVTG--IVRRTKRGELTINAQTITMLTKSL-LPMPEKWHGLSDIELRYRKR 162

Query: 130 FLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187
            LD+  +   K    +R++I++ +R  M  + F+E  TP+L +      A  F       
Sbjct: 163 HLDIMTNEDSKLRFQQRSKILSGIRRFMENDGFMEVETPMLHSVYGGATAEPFKTHHNTL 222

Query: 188 QGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           +   Y L  AP+ + +  + SG  D+ F+I   FR+E   +   P EF  ++   ++ + 
Sbjct: 223 KLDMY-LRIAPELFLKRTLVSGLTDKVFEINRNFRNEGVSTRHNP-EFTMMECYWAYADY 280

Query: 247 DDILNTMENVLRGV------FEEFSNGN---TVSNNFLRICYDDAIR 284
           +DI++ +E +   +        EF  G+   +    F R+   DA++
Sbjct: 281 EDIMDLVERLFESLALSIHGATEFPFGDKTMSFKGPFKRVPMPDAVK 327


>gi|240280743|gb|EER44247.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus H143]
 gi|325089000|gb|EGC42310.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 591

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 113/274 (41%), Gaps = 44/274 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC---FEIAKSVRSEWVLCIDG 75
           +R+ G++  VR      F +I D   I   Q +  P+ A       A  +   W  C  G
Sbjct: 61  IRVRGFIRSVRKQKRFAFAEISDGSTIKSVQAILTPEQAARLSTGSAVDISGVWQPCPPG 120

Query: 76  LVMSRSAETINANIITGQIELSAQKIEI------LSVAEELPLPVFGEREYPESIRFKYR 129
              S         I TG+ +     + I      LS  +   LP   ++ YP  I+ KY 
Sbjct: 121 KEQSHELHATEVKI-TGEADPEVSFVPIPCTACRLSFTDTYTLP--NQQTYP--IQKKYH 175

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAEN---------------FIECSTPILTASSP 174
             D  R   H  +  RT   NS+  R  +E+               F++   P++T+S  
Sbjct: 176 SPDFLRQIPHLRL--RTPF-NSLLSRFRSESIFQLGQVFRFQLGGSFVQVQPPLITSSDC 232

Query: 175 EGARDF--LVPSR----VNQGSFYALPQAPQQYKQLLM---ASGFDRYFQIAPCFRDEDP 225
           EGA +   +VP         G F+  P+      QL +   A+     + ++P FR E  
Sbjct: 233 EGAGEVFTVVPGDKVDGAEVGEFFRSPKYLTVSSQLHLEAYAAELGNVWALSPTFRAEKS 292

Query: 226 RSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLR 258
            + R   EFY L++EM+FV+  D + + +E+++R
Sbjct: 293 DTPRHLSEFYMLEVEMNFVQSVDSLTDIVESLIR 326


>gi|254302420|ref|ZP_04969778.1| asparagine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322612|gb|EDK87862.1| asparagine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 461

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 118/304 (38%), Gaps = 51/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV ++R      F+++ D   +   Q+V       F+    +     + + G ++
Sbjct: 19  IELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSIASTIKVKGTLV 78

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                       +GQ +E+ A KIEI   A+ L  P+  +R   E +R K   L  R +T
Sbjct: 79  KSEG--------SGQDLEVKAHKIEIFQKAD-LEYPLQNKRHTFEYLRTKAH-LRPRTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVN- 187
                  R+ +  ++       NF+   TPI+T S  EGA +           VP + N 
Sbjct: 129 FSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEMFRITTLDLNKVPKKENG 188

Query: 188 ----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+          QL      + F   +   P FR E   + R   EF+ ++ E
Sbjct: 189 EVDFSKDFFGKSTNLTVSGQLNVETFCAAFRNVYTFGPTFRAEYSNTARHASEFWMIEPE 248

Query: 241 MSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLRICY 279
           ++F +    +   E +++ + +          EF N            N ++N+F R+ Y
Sbjct: 249 IAFGDLGANMELAEAMVKYIIKYVMDNCPEEMEFFNSFIEKGLFDKLNNVLNNDFGRVTY 308

Query: 280 DDAI 283
            +AI
Sbjct: 309 TEAI 312



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 15/91 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  EI  G  R    E++ +    +G+++E  E      RFG           PH
Sbjct: 376 DLLAPGIGEIIGGSQREDNYELLTKRMKELGLNEEDYEFYLDLRRFGSF---------PH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R++M L G +N+R+V  FP + N
Sbjct: 427 SGYGLGFERMMMYLTGMQNIRDVIPFPRTPN 457


>gi|145296683|ref|YP_001139504.1| lysyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|140846603|dbj|BAF55602.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 526

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 12/221 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G V  VR  G + F  I++  G T       +A  E  +S+++ W   +D G ++S
Sbjct: 81  VAIAGRVMFVRNTGKLCFASIQEGNGTTVQAMLSLAAVGE--ESLKA-WKADVDMGDIVS 137

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138
              + I++    G++ + A    + S +   PLPV    +  E  R ++R+ DL  R+  
Sbjct: 138 IRGKVISSK--RGELSVMADSWHMASKSLR-PLPV-AFADLSEDTRVRHRYTDLIMREQA 193

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
             N + R +++ ++R  +  ++F+E  TP+L T      AR F   S       Y L  A
Sbjct: 194 RTNALTRIKVMRALRHYLEDQDFLEVETPMLQTLHGGAAARPFKTHSNALDIDLY-LRIA 252

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           P+ Y +  +  G +R F++   FR+E   S   P EF  L+
Sbjct: 253 PELYLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFAMLE 292



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        I+    E   +  ++      V++  F     A + GM
Sbjct: 434 KWDLYVRGFELATGYSELIDPVIQRERFEDQARLAADGDDEAMVLDEDF---LTAMEQGM 490

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   GIDR++M L G   +RE  LFPM
Sbjct: 491 PPTSGNGMGIDRLLMALTGL-GIRETVLFPM 520


>gi|89890462|ref|ZP_01201972.1| lysine--tRNA ligase, LysRS [Flavobacteria bacterium BBFL7]
 gi|89517377|gb|EAS20034.1| lysine--tRNA ligase, LysRS [Flavobacteria bacterium BBFL7]
          Length = 563

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 117/252 (46%), Gaps = 17/252 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-G 75
           G  V ++G +   R  G   F +++D  G  QV  N D  C    KS  ++ +   +D G
Sbjct: 47  GKQVNVAGRLMSRRIAGAASFAELQDSEGRIQVYFNRDEICPGDDKSQYNDVYKKLLDIG 106

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP-VFGEREY------PESIRFK 127
            ++    E     +  G++ +  +K  +L+ A + LPLP V  E +       PE +R++
Sbjct: 107 DIIGIEGELFKTQV--GEMTIMVKKFTLLTKALKPLPLPKVDAEGKVHDGFVDPE-MRYR 163

Query: 128 YRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R+ DL  +   K + VKRT++ N+MR       + E  TPIL        AR F+    
Sbjct: 164 QRYADLVVNPQVKEVFVKRTKLFNAMRNFFNEREYFEVETPILQPIPGGAAARPFITHHN 223

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ +
Sbjct: 224 SLDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKD 281

Query: 246 QDDILNTMENVL 257
            + +++  E +L
Sbjct: 282 YNWMMDFTERLL 293



 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L    +++EV  FP
Sbjct: 456 RALEYGMPPTSGLGIGMDRLIMFLTNNPSIQEVLFFP 492


>gi|78066893|ref|YP_369662.1| lysyl-tRNA synthetase [Burkholderia sp. 383]
 gi|77967638|gb|ABB09018.1| Lysyl-tRNA synthetase, class-2 [Burkholderia sp. 383]
          Length = 524

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 131/312 (41%), Gaps = 44/312 (14%)

Query: 6   THSCGDLGV----SDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL      SD  +       V ++G +   R  G   F  ++D  G  Q    P+
Sbjct: 59  THHAADLQTTFADSDKAALEANPVEVSVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPN 118

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + + +W L   G +++        N   G++ +  +++ +LS A   PLP  
Sbjct: 119 DVGAETYDAFK-KWDL---GDIVAARGVLFRTN--KGELSVQCKELRLLSKALR-PLPDK 171

Query: 116 GEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                 + +R++ R++DL      RDT       RT+ I S+R  M    F+E  TP+L 
Sbjct: 172 FHGLSDQEMRYRQRYVDLIVTPETRDTFRA----RTKTIASIRKFMDNAEFMEVETPML- 226

Query: 171 ASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPR 226
              P GA  + F+          + L  AP+ Y + L+  GF+R F+I   FR+E   PR
Sbjct: 227 HPIPGGAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPR 285

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRI 277
            +    EF  ++   ++ +   +++  E ++R    +     T+         +  F R+
Sbjct: 286 HN---PEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFHRL 342

Query: 278 CYDDAIRRYGTD 289
               AI++Y  D
Sbjct: 343 TITQAIQKYAPD 354



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 432 RFELFMTGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPT 491

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 492 GGCGIGIDRLVMLLTDSPTIRDVLLFP 518


>gi|303388940|ref|XP_003072703.1| lysyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303301845|gb|ADM11343.1| lysyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 440

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 83/166 (50%), Gaps = 6/166 (3%)

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPI 168
           +P   FG ++ PE+I ++ R++DL  +   K    KRT+II  +R  + +  F+E  TP+
Sbjct: 76  IPTEHFGLKD-PETI-YRRRYMDLLINRESKERFEKRTQIIRYIRSFLDSRGFLEVETPM 133

Query: 169 LTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           +        A+ F+        + Y +  +P+ Y + L+  G DR ++I   FR+E    
Sbjct: 134 MNLIPGGAAAKPFITHHNELNLNLY-MRVSPELYLKKLVVGGLDRVYEIGKQFRNEGIDL 192

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
              P EF   +  M++ + +D++   E ++ G+ +E    +T+  N
Sbjct: 193 THNP-EFTSCEFYMAYGDYNDLMKMTEELMSGIVQEMFGTDTIVYN 237



 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR VM L  A N+R+V  FP
Sbjct: 400 ALEYGLPPTAGWGLGIDRFVMYLTNAANIRDVIFFP 435


>gi|120609891|ref|YP_969569.1| lysyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|120588355|gb|ABM31795.1| lysyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 518

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 103/223 (46%), Gaps = 17/223 (7%)

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
           AE       TG++ +    + +L+ +   P+P        + ++++ R++DL  D    +
Sbjct: 135 AEGTLMKTKTGELSVKVTNLRLLTKSLR-PMPDKFHGVADQEVKYRQRYVDLMTDEAARR 193

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
             + R++ ++ +R  M+   F+E  TP+L    P GA  + F+      +   Y L  AP
Sbjct: 194 RFIARSKAVSGIREFMVQHGFLEVETPMLH-PIPGGANAKPFVTHHNALEQEMY-LRIAP 251

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D+++  E ++R
Sbjct: 252 ELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYRDLMDFTEQLVR 310

Query: 259 -------GVFEEFSNGNTV--SNNFLRICYDDAIRRYGTDKPD 292
                  G  +    G  V  S  F R+   +AI R+ TD  D
Sbjct: 311 DAATKAAGSLQLTYQGRAVDLSQPFERLTIREAILRH-TDAGD 352



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR++MLL  + ++R+V LFP
Sbjct: 476 RALEYGMPPTGGCGIGIDRLMMLLTDSPSIRDVILFP 512


>gi|118356761|ref|XP_001011634.1| tRNA synthetases class II [Tetrahymena thermophila]
 gi|89293401|gb|EAR91389.1| tRNA synthetases class II [Tetrahymena thermophila SB210]
          Length = 551

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 118/282 (41%), Gaps = 36/282 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-----ACFEIAKSV 65
           D+  S +G  + + G +H +R  G   FL +R      QVVA   +        +  K +
Sbjct: 91  DIDDSFLGKNILIRGRLHNLRIIGNCAFLIVRQQSQNIQVVAQKQADITSKTMIKWIKKI 150

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG----EREYP 121
             E ++ I G+V       I  N  + Q E+  +KI ++S +  L   V      +++  
Sbjct: 151 HLESIIDIHGIV---QKPNIPINCASSQYEICLKKIFVVSRSSSLNYGVADIQRIKKKSL 207

Query: 122 ESIRFKYRFLDLRR----------DTLHKNIVKRTRI------INSMRCRMIAEN----- 160
           + I  +   +DL            +T++K I  RT        + S  C+M  EN     
Sbjct: 208 KEISDENEEIDLEDRKAINNSFLFNTINKVIDLRTSAQQAIFRLKSSICQMFRENLLLQG 267

Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
           FIE  TP +  S  +   D         G    L   P+ Y Q+ + S F+R F+I P +
Sbjct: 268 FIEIHTPKIIQSFKKEYSDSFSLDYF--GIDAQLSNFPKFYSQMAIQSDFERVFEIGPIY 325

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVF 261
           R    R+     EF  +++EM   E   ++++ + ++L  +F
Sbjct: 326 RKLHGRTHHTLCEFIGMNLEMEIKESYQEVIDIVTDLLFSIF 367



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 4/84 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            + Y       EIASG  RNH    + +     GI      N           G  PHGG
Sbjct: 463 TYSYKFFLRNGEIASGSQRNHDPLSLEKRALQYGIDI----NSIKKYIDVISYGAYPHGG 518

Query: 539 IAAGIDRIVMLLLGAKNVREVSLF 562
              G++R+++  L  +N+R+ SLF
Sbjct: 519 CCIGLERLILYYLDLQNIRKASLF 542


>gi|302380725|ref|ZP_07269190.1| asparagine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302311668|gb|EFK93684.1| asparagine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 461

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/266 (21%), Positives = 109/266 (40%), Gaps = 36/266 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVR-SEWVLCIDGLV 77
           V + GW+   R    + F+++ D   +   Q+V   D+  FE ++ ++ S  ++ +  LV
Sbjct: 19  VEVGGWIKNSRFSKNVGFIELNDGTFFNPVQIVVGKDNEDFEKSEKLKLSSAIIVVGKLV 78

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           ++ +++           E+ A K+ I+        P+  +R   E +R     L  R +T
Sbjct: 79  LTSNSKQ--------PFEIQASKV-IVEGESTDDYPLQKKRHTFEFLR-TILHLRPRTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ- 196
            +     R+R+  ++        F+   TPI+T S  EGA +     RV       LP+ 
Sbjct: 129 FNAVFRVRSRLAFAIHKFFNERGFVYVHTPIITGSDAEGAGEMF---RVTTLDLDNLPKD 185

Query: 197 -------------------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                                 Q +    A  F   +   P FR E   + R   EF+ +
Sbjct: 186 DNGNIDFSQDFFSKSTNLTVSGQLQAEAYALAFRNVYTFGPTFRSEHSNTPRHAAEFWMM 245

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEE 263
           + E+ F + DD+ +  E+++R + ++
Sbjct: 246 EPEICFADLDDVCSLAEDMVRYIIKD 271



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 15/94 (15%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  G  R    E++ Q    +G +KE  +      ++GG+          H
Sbjct: 376 DLLVPGIGELIGGSQREERFELLDQKMDELGFNKEEYKWYLDLRKYGGV---------KH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           GG   G +R+VM + G  N+R+V  FP +   C+
Sbjct: 427 GGFGLGFERMVMYMTGMSNIRDVIPFPRTVGHCE 460


>gi|295698422|ref|YP_003603077.1| asparaginyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157367|gb|ADD79812.1| asparaginyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 466

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 117/280 (41%), Gaps = 53/280 (18%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCI 73
           +G  ++++GWV   R    GI F+D  D   +   QVV        +I ++ R + +   
Sbjct: 16  IGEKIKVTGWVKSRRDSKLGISFIDFYDGSCLKTLQVVVKE-----KIIQNYRKKILSIT 70

Query: 74  DGLVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            G  +           I G + LS    QK E+LS   ++   V     YP SI+ K+ F
Sbjct: 71  TGFSLE----------IIGNLSLSIGKEQKFELLSTDIKVVGNVKDPENYPISIK-KHSF 119

Query: 131 LDLRRDTLHKNIVKRTRIINSM-RCR---------MIAEN-FIECSTPILTASSPEGARD 179
             LR+ +   ++  RT II S+ R R          + EN ++  STPI+T    E +  
Sbjct: 120 EYLRKVS---HLRSRTNIIGSISRIRSDLIYFIHSFLKENGYLLVSTPIITTVDTEKSSK 176

Query: 180 FLVPSRVNQGSFYALPQAPQQY-------KQLLMASG----------FDRYFQIAPCFRD 222
               S ++  +          +       K  L  SG            + +   P FR 
Sbjct: 177 MFCVSSLDLNNLPITKLGKIDFSKDFFGKKTFLTVSGQLNLEAYACSLSKVYSFGPTFRA 236

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E   + +   EF+ L++E SF++  +++   EN+L+ VF+
Sbjct: 237 EPSNTRKHLAEFWMLELEASFLDLSELIQLSENMLKYVFK 276


>gi|298374691|ref|ZP_06984649.1| asparagine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298269059|gb|EFI10714.1| asparagine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 468

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 111/272 (40%), Gaps = 36/272 (13%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L     G+ V + GWV   R    + F+ + D   I   Q+V + D    E  
Sbjct: 6   RTKIVDVLKSEAFGTTVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDVDKLGDEFL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYP 121
           K + +   + ++G++     +        GQ +E+ A +IEI   A+    P+   ++  
Sbjct: 66  KPITTGASISVNGILTQSQGK--------GQSVEIQATEIEIFGTADPATYPL---QKKG 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGA-R 178
            S+ F      LR  T     V R R  +  ++        F    TPI+TAS  EGA +
Sbjct: 115 HSMEFLREIAHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQ 174

Query: 179 DFLVPSR-------------VNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRD 222
            F V ++             + +  F+    +     QL   L A+   + +   P FR 
Sbjct: 175 MFQVTTKNLYDLKKDENGSIIYEDDFFGKQASLTVSGQLEGELAATALGQIYTFGPTFRA 234

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           E+  + R   EF+ ++ E++F   +DI + ME
Sbjct: 235 ENSNTPRHLAEFWMIEPEVAF---NDITDNME 263


>gi|254446739|ref|ZP_05060214.1| asparaginyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198256164|gb|EDY80473.1| asparaginyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 461

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 113/277 (40%), Gaps = 35/277 (12%)

Query: 10  GDLGVSDVG-SFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVR 66
            DL  S+ G   V + GWV   R      FL+I D   +   Q V N D+A +  +K + 
Sbjct: 7   ADLMKSETGLDSVVIQGWVRTRRDSKTFFFLEINDGSCLKSMQAVVNEDAAGYADSKGIA 66

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           +   + + G +++   +        GQ  E+ A  +E++  A+E   P+  +R   E +R
Sbjct: 67  TGASVTVKGRLVASQGK--------GQKWEIQADSVELVGSADET-FPLQKKRHSNEYLR 117

Query: 126 FKYRFLDLR-RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
                  LR R   +  + + R+++  ++        F    TPI+TAS  EGA +    
Sbjct: 118 ---EIAHLRPRTNFYGAVFRIRSKLAFAIHRFFNDRQFFYVHTPIVTASDCEGAGELFRV 174

Query: 184 SRVN--------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPR 226
           S ++                 F+          QL     AS     +   P FR E+  
Sbjct: 175 STLDPKNPPLGEGGEIDSSKDFFGRSTYLTVSGQLEGETYASALGNIYTFGPTFRAENSN 234

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           + R   EF+ ++ EM+F +    ++  E  ++ V +E
Sbjct: 235 TSRHASEFWMIEPEMAFCDLAADMDLAEEFVKSVIKE 271


>gi|19553881|ref|NP_601883.1| lysyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62391524|ref|YP_226926.1| lysyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|21325459|dbj|BAC00081.1| Lysyl-tRNA synthetase class II [Corynebacterium glutamicum ATCC
           13032]
 gi|41326866|emb|CAF20710.1| LYSYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 526

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 12/221 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G V  VR  G + F  I++  G T       +A  E  +S+++ W   +D G ++S
Sbjct: 81  VAIAGRVMFVRNTGKLCFASIQEGNGTTVQAMLSLAAVGE--ESLKA-WKADVDMGDIVS 137

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138
              + I++    G++ + A    + S +   PLPV    +  E  R ++R+ DL  R+  
Sbjct: 138 VRGKVISSK--RGELSVMADSWHMASKSLR-PLPV-AFADLSEDTRVRHRYTDLIMREQA 193

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
             N + R +++ ++R  +  ++F+E  TP+L T      AR F   S       Y L  A
Sbjct: 194 RTNALTRIKVMRALRHYLEDQDFLEVETPMLQTLHGGAAARPFETHSNALDIDLY-LRIA 252

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           P+ Y +  +  G +R F++   FR+E   S   P EF  L+
Sbjct: 253 PELYLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFAMLE 292



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        I+    E   +  ++      V++  F     A + GM
Sbjct: 434 KWDLYVRGFELATGYSELIDPVIQRERFEDQARLAADGDDEAMVLDEDF---LTAMEQGM 490

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   GIDR++M L G   +RE  LFPM
Sbjct: 491 PPTSGNGMGIDRLLMALTGL-GIRETVLFPM 520


>gi|281421746|ref|ZP_06252745.1| asparagine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281404241|gb|EFB34921.1| asparagine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 475

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/278 (20%), Positives = 108/278 (38%), Gaps = 38/278 (13%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  +  GS V + GWV   R    + F+ + D   I   Q+V +P       +
Sbjct: 6   RTKVVDLLKSTAYGSIVNVKGWVRTHRSSKAVDFIALNDGSTINNIQIVVDP-------S 58

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGER-EY 120
           K   ++      G  +S     + +      +E+  + IEI  +   + P+   G+  EY
Sbjct: 59  KVDENQLRQVTTGACISAVGTLVESQGAGQSVEIQCESIEIYGLCGSDYPMQKKGQSFEY 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
                 +Y  L LR +T    +  R  +  ++        +   +TP++TAS  EGA   
Sbjct: 119 MR----QYAHLRLRTNTFGAVMRIRHNMAMAIHTYFHEHGYFYFNTPLITASDCEGAGQM 174

Query: 181 LVPSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCF 220
               +V   + Y L +                       Q +  L A+     +   P F
Sbjct: 175 F---QVTTKNLYNLKKTEDGKIDYSDDFFGKQTSLTVSGQLEGELGATALGAIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           R E+  + R   EF+ ++ E++F++ D ++   E+ ++
Sbjct: 232 RAENSNTPRHLAEFWMVEPEVAFLDMDGLMELEEDFIK 269


>gi|70989689|ref|XP_749694.1| cytoplasmic asparaginyl-tRNA synthetase [Aspergillus fumigatus
           Af293]
 gi|66847325|gb|EAL87656.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Aspergillus
           fumigatus Af293]
 gi|159129102|gb|EDP54216.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Aspergillus
           fumigatus A1163]
          Length = 574

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 117/292 (40%), Gaps = 25/292 (8%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G       G+ VR+ G VHR+R    +IFL + D YG  Q V   +      A ++  E 
Sbjct: 141 GSPETQTAGTRVRVLGRVHRLRVQKDVIFLTLSDGYGYLQCVLTGNLTKTYDAMTLTLET 200

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRF 126
            + I G + +   +    N      EL A    ++  A   +E       +   P+++ +
Sbjct: 201 SMAIHGEMRAVPPKQHAPN----DRELHADFFTVIGRAAGDKEAITTRVAKDADPQTL-Y 255

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR +     +  R   + + R     +  +E + P +  +  EG          
Sbjct: 256 DNRHLVLRGEISSAVMKVRAACLKAFRQVFEEKRMLEVTPPAMVQTQVEGGSTLFKFDYY 315

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            + ++  L Q+ Q Y +  + S  D  F + P FR E   + R   E+  ++ E+ F+  
Sbjct: 316 GEDAY--LTQSSQLYLETCLPSLGD-VFCVCPSFRAEKSLTRRHLSEYTHIEAELDFITF 372

Query: 247 DDILNTMENVLRGVFE-EFSNGNTV-------------SNNFLRICYDDAIR 284
            D+L+ +E V+  V E   +N  T              S  F R+ Y DAI+
Sbjct: 373 TDLLDHLEEVICRVIELTLANPATAALIKQLNPDFKPPSRPFRRMKYADAIQ 424


>gi|313158498|gb|EFR57892.1| asparagine--tRNA ligase [Alistipes sp. HGB5]
          Length = 462

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 105/258 (40%), Gaps = 29/258 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSEWVLCIDGLVM 78
           + + GWV   R +  + F+ + D   +  +    D A F  E  K + +   + +DG ++
Sbjct: 19  IVVKGWVRTKRGNKNVAFIALNDGSCVANIQIVVDLAKFGEEQLKPITTGACIRVDGRLV 78

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                   A++ +GQ +E+ A+KIEI   A+    P+  +    E +R    +L  R +T
Sbjct: 79  --------ASLGSGQRVEVQAEKIEIYGTADPETYPLQKKGHSLEFLR-DIAYLRPRTNT 129

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  ++      E F    TP++TAS  EGA      + ++        Q 
Sbjct: 130 FGAVLRIRHAMAYAIHEYFNREGFYYFHTPLITASDCEGAGAMFQVTTLDLNDVPKNEQG 189

Query: 198 PQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              + Q                  L A    R +   P FR E+  + R   EF+ ++ E
Sbjct: 190 QVDFSQDFFGKACNLTVSGQLEGELGALSLGRIYTFGPTFRAENSNTPRHASEFWMIEPE 249

Query: 241 MSFVEQDDILNTMENVLR 258
            +F E +D +   E+ L+
Sbjct: 250 AAFYELEDNMELAEDFLK 267


>gi|57506076|ref|ZP_00371999.1| lysyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57015684|gb|EAL52475.1| lysyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 502

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/283 (21%), Positives = 120/283 (42%), Gaps = 17/283 (6%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D    V ++G V  +R  G  IF +I D     Q+  + DS   E     +    L +  
Sbjct: 53  DEKVLVSIAGRVKLLRIAGKSIFANIEDESENVQIYFSKDSIGEEQFNLFKKN--LEVGD 110

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +++++    +      G+  L   K+  L+    +PLP           R++ R++D+  
Sbjct: 111 IILAKGYPFLTK---MGEFSLHISKL-TLATKSIVPLPEKFHGLTDIEQRYRKRYVDMIM 166

Query: 136 DT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           +  + K+   R++I++ +R     + F+E  TP++   +        V      G    L
Sbjct: 167 NADVRKDFFTRSKIVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNALGVERFL 226

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ + + L+  GF+  F+I  CFR+E       P EF  ++   ++   +D+++  E
Sbjct: 227 RIAPELHLKRLIVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYNDLMDLTE 285

Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGT 288
            +   + +E +    +         S  F RI Y +A+ +YG 
Sbjct: 286 ELFALLLKELNLETKITFDDKIIDFSRPFERISYKEALEKYGN 328



 Score = 44.7 bits (104), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL   K++R+V LFP
Sbjct: 453 ALGYGMPPTAGEGIGIDRLVMLLTEKKSIRDVILFP 488


>gi|261868080|ref|YP_003256002.1| asparaginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413412|gb|ACX82783.1| asparaginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 467

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 107/268 (39%), Gaps = 32/268 (11%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +G  V + GWV   R    G+ FL + D   +   Q + N D A +E      SE +   
Sbjct: 17  IGEKVTVRGWVRTRRDSKAGLSFLAVYDGSCFAPIQAIVNNDIANYE------SEVLRLT 70

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLD 132
            G  +  +   + +      +EL A+K+E+    E+    P+  +R    SI +      
Sbjct: 71  AGCSVVVTGTVVESPAEGQAVELQAEKVEVTGWVEDPETYPMAAKRH---SIEYLREVAH 127

Query: 133 LRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T     V R R  +  ++      + F   +TP++TAS  EGA +    S ++  +
Sbjct: 128 LRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLEN 187

Query: 191 FYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGE 233
                +    + Q        L  SG            + +   P FR E+  + R   E
Sbjct: 188 LPRTDKGAVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAE 247

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVF 261
           F+ ++ E++F    D     E++L+ VF
Sbjct: 248 FWMIEPEVAFATLADNAKLAEDMLKYVF 275


>gi|237740975|ref|ZP_04571456.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229431019|gb|EEO41231.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 461

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 116/307 (37%), Gaps = 57/307 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV ++R      F+++ D   +   Q+V       F+    +     + + G ++
Sbjct: 19  IELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSISSTIKVKGTLV 78

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                       +GQ +E+ A KIEI   A+ L  P+  +R   E +R K   L  R +T
Sbjct: 79  KSQG--------SGQDLEVKADKIEIFQKAD-LEYPLQNKRHTFEYLRTKAH-LRARTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+ +  ++       NF+   TPI+T S  EGA +     RV       LP+ 
Sbjct: 129 FSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEMF---RVTTLDMNKLPKK 185

Query: 198 PQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                                 Q       + F   +   P FR E   + R   EF+ +
Sbjct: 186 ENGEIDFTKDFFGKSTNLTVSGQLNVETFCAAFRNVYTFGPTFRAEYSNTARHASEFWMI 245

Query: 238 DMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLR 276
           + E++F +    +   E +++ + +          EF N            N ++N+F R
Sbjct: 246 EPEIAFGDLGANMELAEAMVKSIIKYVMDNCPEEMEFFNSFIEKGLFDKLNNVLNNDFGR 305

Query: 277 ICYDDAI 283
           + Y +AI
Sbjct: 306 VTYTEAI 312



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  EI  G  R    E++L     +G+ KE  E      RFG           PH
Sbjct: 376 DLLAPGIGEIIGGSQREDSYEILLNRMEELGLDKESYEFYLDLRRFGSF---------PH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R++M L G +N+R+V  FP + N
Sbjct: 427 SGYGLGFERMMMYLTGMQNIRDVIPFPRTPN 457


>gi|226362991|ref|YP_002780773.1| aspartyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226241480|dbj|BAH51828.1| aspartyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 241

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+  G E+ +GG R H       A +  G         +     A   GMPPHGG A 
Sbjct: 156 FDLLFRGLELVTGGQRLHNHADYTAALAARGEDPAA----YSPYLEAMGHGMPPHGGFAI 211

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R V  LL A N+R  +LFP
Sbjct: 212 GLERWVSRLLQADNIRYATLFP 233


>gi|189210902|ref|XP_001941782.1| lysyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187977875|gb|EDU44501.1| lysyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 601

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 88/177 (49%), Gaps = 7/177 (3%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           G++ + A+++ +L+     LP   FG ++  +  R + RFLDL   D+     + RT+I+
Sbjct: 197 GELSIFAREVILLTPCLRMLPTEHFGYKD--QEQRHRNRFLDLIMNDSTRNTFITRTKIV 254

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            ++R  +   +F+E  TP++   +    AR F           Y +  AP+ Y + L+  
Sbjct: 255 KAIRKYLDDRDFLEVQTPMMNKIAGGATARPFKTYHNELDMELY-MRIAPELYLKELVVG 313

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           G +R ++I   FR+E       P EF   +  M++ + +D+LN  E ++  + +E +
Sbjct: 314 GLERVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYNDVLNMTEELVSELVKEVT 369



 Score = 40.8 bits (94), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 29/55 (52%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
           ++ + G+PP GG   GIDR+VM L     ++EV  FP  ++  +    +   V V
Sbjct: 536 QSLEYGLPPTGGWGMGIDRLVMFLTDHYTIKEVLTFPFMKDIVEDKKPAAEVVDV 590


>gi|124514753|gb|EAY56265.1| Lysyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 507

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 16/269 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R++G V  +R  G   F  ++D  G  Q+    D    E   ++ +E +   D L     
Sbjct: 69  RIAGRVVLLRRFGKAFFATLQDASGRFQIYVRKDHIG-EEPYALLAETLDIGDHL----G 123

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E       TG+  L A  +  L  +   PLP           R++ R++DL  +   ++
Sbjct: 124 VEGTFFRTKTGEPTLDASHVTFLGKSVH-PLPEKWHGLTDIEQRYRQRYIDLIVNPDARD 182

Query: 142 I-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
           + V+R +I+ S+R  M    F+E  TP++   SP GA  R F+          Y L  AP
Sbjct: 183 VFVRRGKILGSIRRFMEDRGFMEVETPMM-HPSPGGALARPFVTHHNALDVDLY-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Y + LM  GFD  F+I   FR+E   PR +    EF  ++  M++   +D++   E++
Sbjct: 241 ELYLKRLMVGGFDLVFEINRNFRNEGFSPRHN---PEFTMMEFYMAYHSPEDLMALTESL 297

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
              +  E    +  +    R+ +    RR
Sbjct: 298 FDRLAREIHGDSRFAYGEHRLDFAGPYRR 326



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 16/93 (17%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----------LYRAFQ 530
           +++L   G EIA+G +  +  +  L+ F    +S++  E+R  G            RA +
Sbjct: 416 RFELFVAGVEIANGFMELNDPDEQLRRF----LSQQ--ESRNSGDLEAPPPDMDYIRALE 469

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+PP  G   GIDR+VMLL    ++R+V LFP
Sbjct: 470 IGLPPTAGEGIGIDRLVMLLTNQHSIRDVLLFP 502


>gi|111114923|ref|YP_709541.1| asparaginyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123047068|sp|Q0SP63|SYN_BORAP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|110890197|gb|ABH01365.1| asparaginyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 462

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 109/262 (41%), Gaps = 28/262 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA--KSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F+    K++ +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFDEKDLKNLTTGASIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++  A+    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTCGFNVIGEADPKTYPLQKKRHTFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----- 187
           +R +T       R++I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAVARVRSKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKPN 185

Query: 188 --------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NDLGNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLR 258
           ++ EM+F + +D +   E++L+
Sbjct: 246 IEPEMAFYKLNDNITLAEDLLK 267


>gi|90962323|ref|YP_536239.1| lysyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227891608|ref|ZP_04009413.1| lysyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|90821517|gb|ABE00156.1| Lysyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227866755|gb|EEJ74176.1| lysyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|300214973|gb|ADJ79389.1| Lysyl-tRNA synthetase [Lactobacillus salivarius CECT 5713]
          Length = 495

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 112/242 (46%), Gaps = 15/242 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G + F D++D  G  Q+    D    E+    +   +    G  +  + 
Sbjct: 63  IAGRMVAKRGKGKVGFADLQDKTGRMQLYIRKDEVGEEMYHIFKRSDL----GDFLGVTG 118

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRDTLH 139
           + I  ++  G++ +   K+  LS A   PLP  F   +  E I ++ R+LDL   R++ +
Sbjct: 119 DVIKTDM--GELTIKVTKLTFLSKALR-PLPDKFHGLQNVEQI-YRQRYLDLITNRESYN 174

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  V R++I+ ++R  + +  F+E  TP+L   +    AR F+          Y L  A 
Sbjct: 175 R-FVNRSKIVTAVRNYLDSNGFLEVETPVLHNQAGGAAARPFITHHNALDIQLY-LRIAL 232

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+  G +R ++I   FR+E   +   P EF  L+   ++ +  D+++  E + +
Sbjct: 233 ELHLKRLIVGGMERVYEIGRVFRNEGIDTKHNP-EFTMLETYAAYFDFKDVMDETEGIFK 291

Query: 259 GV 260
             
Sbjct: 292 AA 293



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 8/52 (15%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GI ++ +E        A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 447 GIDEDYIE--------AMEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 490


>gi|254565151|ref|XP_002489686.1| Mitochondrial lysine-tRNA synthetase [Pichia pastoris GS115]
 gi|238029482|emb|CAY67405.1| Mitochondrial lysine-tRNA synthetase [Pichia pastoris GS115]
 gi|328350105|emb|CCA36505.1| lysyl-tRNA synthetase, class II [Pichia pastoris CBS 7435]
          Length = 540

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 120/264 (45%), Gaps = 19/264 (7%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSEWVLCI 73
           + +   + G +  +R  G G+IF+DI   +   Q+V +        E   ++ SE+ +  
Sbjct: 83  IDTLFSVCGKISSIRRAGKGMIFMDIIQDFTKLQLVIHHKMLNLNKEEFSNIHSEFRIGD 142

Query: 74  DGLVMSRSAETINANIITGQIELSA-QKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
              V+    +T       G++ L A Q++++ + A     P   +     S+R     ++
Sbjct: 143 HVSVIGFPGKTD-----VGELSLKANQRVKLAAPALHPLPPKLTDTAKINSLRVVDYLVN 197

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSR-----V 186
            +   +   I+ R++II+++R  +    F+E STPI+  S +   A  F+  S      +
Sbjct: 198 RKSQEI---ILARSKIISTIRKFLEDRQFVEVSTPIIANSGTGANATPFVTSSEHIKNDM 254

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            Q     L  AP+ + + L+ SGFD+ F+I   FR+E   S   P EF   +   +F   
Sbjct: 255 LQPEPLQLRVAPELWLKKLIISGFDKVFEIGKVFRNEGIDSTHNP-EFSTCEFYQTFTSL 313

Query: 247 DDILNTMENVLRGVFEEFSNGNTV 270
           ++++N   ++ R +  E  N  ++
Sbjct: 314 EELMNLTTDLFRSISTELLNAESL 337


>gi|29653775|ref|NP_819467.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|154707035|ref|YP_001424981.1| lysyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|161830462|ref|YP_001596361.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|164686042|ref|ZP_01947471.2| lysyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165924116|ref|ZP_02219948.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|212213083|ref|YP_002304019.1| lysyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212218959|ref|YP_002305746.1| lysyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|39932163|sp|Q83E97|SYK_COXBU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189082957|sp|A9KEG1|SYK_COXBN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189082958|sp|A9NBP7|SYK_COXBR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710886|sp|B6J8K2|SYK_COXB1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710887|sp|B6J1P6|SYK_COXB2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|29541038|gb|AAO89981.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|154356321|gb|ABS77783.1| lysyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|161762329|gb|ABX77971.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|164601597|gb|EAX31910.2| lysyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165916439|gb|EDR35043.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|212011493|gb|ACJ18874.1| lysyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212013221|gb|ACJ20601.1| lysyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 498

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 131/302 (43%), Gaps = 38/302 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V+++G +   R  G   F  I+D  G  Q+    DS    +    +S W    ++ I+G 
Sbjct: 63  VKMAGRMMTRRIMGKASFAHIQDMKGRMQIYVTRDSLPQGVYSDFKS-WDLGDIVGIEGE 121

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +     E ++  +   QI L  + +         P+P      + +  RF+ R+LDL  +
Sbjct: 122 LFKTKTEELSVKV--DQIRLLTKALR--------PMPDKFHGLHDQEQRFRQRYLDLIVN 171

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
              +++ + R+++I  +R  +    +IE  TP++    P GA  R F           + 
Sbjct: 172 ESSRHLFQTRSQVIAQIRRFLDDRGYIEVETPMM-HPLPGGAAARPFETHHNAMNMDLF- 229

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF++ ++I   FR+E   +   P EF  L+   ++   +D++   
Sbjct: 230 LRIAPELYLKRLVVGGFEKVYEINRNFRNEGISTRHNP-EFTMLEFYQAYATYEDMMMLT 288

Query: 254 ENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           E+++R       GV E    G  +  N  F R+   DAI ++        NP I  +  +
Sbjct: 289 ESMIRHLAEKIFGVMEIKYQGVRIDLNKPFPRLSLRDAILQF--------NPGITPDQID 340

Query: 305 HF 306
           H 
Sbjct: 341 HL 342



 Score = 41.6 bits (96), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G+PP  G   GIDR+VML     ++R+V LFP+
Sbjct: 458 ALEYGLPPTAGEGIGIDRLVMLFTDNASIRDVILFPL 494


>gi|317153560|ref|YP_004121608.1| asparaginyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943811|gb|ADU62862.1| asparaginyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 455

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 22/267 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L  +     + + GWV   R   G  FL++ D  G+  + A  D      A  
Sbjct: 3   RTKIKAALAATGPMDEIVIKGWVRTKRDSKGFSFLELNDGSGLLNIQAVVDHTPEIEAAL 62

Query: 65  VR--SEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYP 121
            R  +   +C+ G ++    +        GQ  E+  + +E+L  A++   P+  +R   
Sbjct: 63  ARIGTGASVCVTGALVESPGK--------GQKWEIRGRGLEVLGEADQETFPLQKKRHSD 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R     L  R +        R+ +  ++      + F    TPI+T S  EGA +  
Sbjct: 115 EFLR-TIAHLRPRTNKYGAMFRIRSELAQAIHKFFADKGFFYIHTPIITGSDCEGAGEMF 173

Query: 182 VPSRVNQGS-------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLP 231
             + +  GS       F+  P       QL   + A      +   P FR E+  + R  
Sbjct: 174 RVTSLEPGSTESADKDFFGKPAQLTVSGQLSAEMFALSLGDVYTFGPTFRAENSNTPRHV 233

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLR 258
            EF+ ++ EM+F +  D ++  E +++
Sbjct: 234 AEFWMIEPEMAFADLADNMDLGEEMIK 260



 Score = 38.9 bits (89), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G  PH G   G +R++ML+ G  N+R+V  FP + N
Sbjct: 416 GTAPHAGFGMGFERMLMLVTGVANIRDVMPFPRTPN 451


>gi|238883496|gb|EEQ47134.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 486

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 109/249 (43%), Gaps = 29/249 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD---HYGITQVVANPDSACFEIAKS--VRSEWVL 71
           +GS +   G+V  +R    + F+DI D      +  V+  PD   F++ +S  V+ +W +
Sbjct: 39  IGSIIEARGFVKSIRSSKKVGFVDITDGSISNNLNIVLQGPDQPKFKVGQSIVVKGDWTV 98

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRF 130
                   +    +  N    Q       I IL  V ++ PL     ++   S+ F   F
Sbjct: 99  G-----KGKQPFELKYNPENPQ-----HAITILGDVTDDYPL-----QKKATSMSFLRNF 143

Query: 131 LDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF-----LVP 183
            ++  R  TL   +  R+ +   +     + +FI+ + P++T+S  EGA +      L P
Sbjct: 144 PEIKHRTSTLGSFLRLRSHLEFKLMEFFQSRDFIKVTPPLITSSDCEGAGEVFKIEPLNP 203

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                G    L  + Q + + L A   +R + + PCFR E+  + R   EF+ L+ E+S 
Sbjct: 204 KEPFFGKNAYLTVSTQLHLECL-ALALNRAWTLTPCFRAENSNTTRHLSEFWMLEAEISH 262

Query: 244 VEQDDILNT 252
           V+  D + T
Sbjct: 263 VDNMDQVTT 271



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 5/90 (5%)

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           +DL+   F E+A G +R H  +V+L       ++ E +E          + G  PHGG  
Sbjct: 400 FDLLVPEFGELAGGSMREHDYQVLLANMKQENMNIEDME----WYLNLRKQGTIPHGGFG 455

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R++  L G  NVR++S FP +   C+
Sbjct: 456 LGFERLISYLAGYDNVRDISAFPRAPELCN 485


>gi|327438059|dbj|BAK14424.1| lysyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 497

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 112/255 (43%), Gaps = 15/255 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  I+D  G  Q+    D+   E  +      +  I G     
Sbjct: 61  VVIAGRIMTKRGKGKAGFAHIQDLAGQIQIYVRKDAIGEEAYELFNKADLGDIVG----- 115

Query: 81  SAETINANIITGQI-ELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-RRDT 137
               +  N+   Q+ ELS +  E   + + L PLP           R++ R++DL   D 
Sbjct: 116 ----VKGNVFRTQVGELSVKATEFTFLTKALRPLPDKFHGLTDVEQRYRQRYVDLMTNDE 171

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
                ++R++II ++R  +    ++E  TP+L T +    AR F+          Y +  
Sbjct: 172 SKTTFIQRSKIIRAIRNYLDNNGYLEVETPMLHTIAGGAAARPFITHHNALDMELY-MRI 230

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + +DI++  EN+
Sbjct: 231 AIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP-EFTMIELYEAYADYNDIMDLTENL 289

Query: 257 LRGVFEEFSNGNTVS 271
           +  V ++     +V 
Sbjct: 290 IAHVAQDVLGTTSVQ 304



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFP 490


>gi|156084320|ref|XP_001609643.1| lysyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796895|gb|EDO06075.1| lysyl-tRNA synthetase, putative [Babesia bovis]
          Length = 522

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 6/170 (3%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRII 149
           TG++ L    + IL+    LP+P         + R K R LD+  +   + I+ +R+ II
Sbjct: 169 TGELTLIPHHMSILAKCL-LPMPDGFHGLKDVATRHKLRHLDIMVNEDTRGILLQRSHII 227

Query: 150 NSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R  + ++ F+E  TPIL    S   A+ F   S     + Y L  AP+ + + L+  
Sbjct: 228 WELRKLLHSKGFVEVETPILQHIYSGANAQPFKTRSEALDENLY-LRIAPEFFLKRLIVG 286

Query: 209 GF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           G  D+ F+I  CFR+E   +   P EF  +++        D++N +E ++
Sbjct: 287 GLGDKIFEIGKCFRNEGTSARHSP-EFTMIEIYQQMANAGDMINLLEEII 335



 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 1/87 (1%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K   ++    G EIA G         +L      G+ + +   R   L  A   GMPP  
Sbjct: 432 KGKVFESYLQGLEIAHGCTEECNPVQLLHKLDMCGL-QGLGHTRDTELLNAVAHGMPPTA 490

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GI  GIDR+VM L    +++ +  FP+
Sbjct: 491 GIGIGIDRLVMALSKTTSIKNIQTFPL 517


>gi|126663329|ref|ZP_01734327.1| lysyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126624987|gb|EAZ95677.1| lysyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 565

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 131/292 (44%), Gaps = 30/292 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--LCIDG 75
           G  V L+G +   R  G   F++++D  G  Q+  N D  C    K++ ++    L   G
Sbjct: 46  GKKVILAGRMMSDRDMGKASFVELQDSEGRIQLYFNRDVLCPGDDKTLYNQVFRKLTDLG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLP-------VFGEREYPESIRFK 127
             +    E     +  G + +     ++LS   + LPLP       VF     PE +R++
Sbjct: 106 DFIGIEGELFMTKV--GAMCIRVDDFKMLSKTLKPLPLPKTDEEGHVFDAFTDPE-LRYR 162

Query: 128 YRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPS 184
            R++DL  +   K + +KRT++  +MR       ++E  TP+L  S P G  AR F+   
Sbjct: 163 MRYVDLVVNPQVKEVFMKRTKLFTAMRTFFNEAGYMEVETPVL-QSIPGGAAARPFITHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ 
Sbjct: 222 NSLDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYK 279

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSN------NF----LRICYDDAIRRY 286
           + + ++   EN+L     +  NG T +       NF     R+   DAI+++
Sbjct: 280 DYNWMMEMTENLLEYCANQV-NGTTEATFGEHKVNFKAPYARVTMTDAIKQF 330



 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L    +++EV  FP
Sbjct: 456 RALEYGMPPTSGLGIGMDRLIMFLTNNASIQEVLFFP 492


>gi|301308639|ref|ZP_07214591.1| lysine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300833163|gb|EFK63781.1| lysine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 576

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 29/286 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK---SVRSEWVLCIDGLV 77
           V ++G +   R  G   F++++D  G  QV  + D  C +  K   +V  + +L I   V
Sbjct: 55  VSIAGRIMSRRIMGKASFMELQDSEGRIQVYISRDDICPDENKDTYNVVFKKLLDIGDFV 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYR 129
                +        G+I + AQ++ +LS +   PLPV   ++         PE +R++ R
Sbjct: 115 ---GIKGFVFRTQMGEISVHAQELTVLSKSLR-PLPVVKYKDGVAYDGFNDPE-LRYRQR 169

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL  +   K+I +KR  II +MR  +    + E  TPIL + +    AR F       
Sbjct: 170 YVDLVVNEGVKDIFMKRAAIIKTMRTALDEAGYTEVETPILQSIAGGASARPFTTHHNSL 229

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + +
Sbjct: 230 DIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMELYVQYKDYN 287

Query: 248 DILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
            +++  E +L        G  E   +G T+S    F R+   +AI+
Sbjct: 288 WMMSFTEKLLERICIAVNGTSESTIDGKTISFKAPFRRLPILEAIK 333



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP
Sbjct: 460 RALQFGMPPTSGIGIGIDRLVMLMTGQTTIQEVLLFP 496


>gi|289424110|ref|ZP_06425896.1| asparagine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289155535|gb|EFD04214.1| asparagine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 466

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/311 (21%), Positives = 125/311 (40%), Gaps = 56/311 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSA--CFEIAKSVRSEWVLC 72
           VG  V ++GW+   R      F+++ D   +   Q+V + +      EI+K   S  +L 
Sbjct: 19  VGKKVCVAGWIRTARISKSFGFIELNDGSFFKNIQIVVDENKLDNFKEISKLAISSAILV 78

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
              LV   +A+          IE+ A K+ I+    +   P+  ++   E +R     L 
Sbjct: 79  EGELVKVDNAK--------NPIEIHATKL-IVEGDSDSSYPLQKKKHTFEYLR-TIAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS-- 190
            R +T       R+ +  ++       NF+   TP++T S  EGA +    + ++  +  
Sbjct: 129 PRSNTFSAVFRVRSVVAFALHKFFNERNFVYAHTPLITGSDTEGAGEMFQVTTLDMANPP 188

Query: 191 ------------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+  P       QL   +MA  F   +   P FR E+  + R   EF+
Sbjct: 189 LTEDGKIDYSQDFFGKPTNLTVSGQLNGEIMALAFRNIYTFGPTFRAENSYTGRHASEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVL-----------------------RGVFEEFSNGNTVSN 272
            ++ E+ F + +D++   E+++                       +G+FE       VS+
Sbjct: 249 MVEPEIVFADLEDLMELAEDMIKFVINYVLENCPEEMAFFNSFIDKGLFERLD--KIVSS 306

Query: 273 NFLRICYDDAI 283
           +F+RI Y +A+
Sbjct: 307 DFVRITYTEAV 317



 Score = 40.4 bits (93), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G  R    +V++     +G+++E     +       + G   H G   
Sbjct: 381 DLLVPGVGEIIGGSQREERYDVLMDKIREMGLNEE----EYWWYLELRKFGTATHSGFGL 436

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +RI+M L G  N+R+V  FP +
Sbjct: 437 GFERIIMYLTGMSNIRDVIPFPRT 460


>gi|325922531|ref|ZP_08184292.1| asparaginyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325546996|gb|EGD18089.1| asparaginyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 464

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 107/270 (39%), Gaps = 40/270 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D   +   QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEVKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           +++    +        GQ  E+ A  +EI+   E+ L  P+   +  P S  F      L
Sbjct: 77  VLVKSQGK--------GQSFEIQASGVEIVGWVEDPLTYPI---QPKPMSPEFLREVAHL 125

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R R  L   + +    +     R   +N F   STPI+T S  EGA       RV+    
Sbjct: 126 RPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIVTTSDAEGAGQMF---RVSTLDM 182

Query: 192 YALPQAPQQ----------YKQLLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
             LP+  +            +  L  SG            + +   P FR E+  + R  
Sbjct: 183 ANLPRNEKGEVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHL 242

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            EF+ ++ E++F +  +     E  L+ +F
Sbjct: 243 AEFWMIEPEIAFADLAEDARLAEQFLKYLF 272


>gi|330939275|ref|XP_003305825.1| hypothetical protein PTT_18775 [Pyrenophora teres f. teres 0-1]
 gi|311316967|gb|EFQ86058.1| hypothetical protein PTT_18775 [Pyrenophora teres f. teres 0-1]
          Length = 601

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 88/177 (49%), Gaps = 7/177 (3%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           G++ + A+++ +L+     LP   FG ++  +  R + RFLDL   D+     + RT+I+
Sbjct: 197 GELSIFAREVILLTPCLRMLPTEHFGYKD--QEQRHRNRFLDLIMNDSTRNTFITRTKIV 254

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            ++R  +   +F+E  TP++   +    AR F           Y +  AP+ Y + L+  
Sbjct: 255 KAIRKYLDDRDFLEVQTPMMNKIAGGATARPFKTYHNELDMELY-MRIAPELYLKELVVG 313

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           G +R ++I   FR+E       P EF   +  M++ + +D+LN  E ++  + +E +
Sbjct: 314 GLERVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYNDVLNMTEELVSELVKEVT 369



 Score = 40.8 bits (94), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 29/55 (52%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
           ++ + G+PP GG   GIDR+VM L     ++EV  FP  ++  +    +   V V
Sbjct: 536 QSLEYGLPPTGGWGMGIDRLVMFLTDHYTIKEVLTFPFMKDIVEDKKPAAEVVDV 590


>gi|260186588|ref|ZP_05764062.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
          Length = 1111

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 23/230 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC- 58
           R  +H+      +D  + V +SG + R+R +GG +F  +RD  G  QV+   +  D  C 
Sbjct: 647 RPPSHTVAQALAADHQASVSVSGRIMRIRNYGGALFAQLRDWSGEMQVLLDNSRLDQGCA 706

Query: 59  --FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  A  +       ++      +++T   ++I     L  + +         PLP   
Sbjct: 707 ADFNAATDLGD----LVEMTGHMGASKTGTPSLIVSGWRLIGKCLR--------PLPNKW 754

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL      
Sbjct: 755 KGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGG 814

Query: 175 EGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AR F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 815 ATARPFV--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 862



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 41/214 (19%)

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCF----FIAGDPLKFCSFAADARNHI 420
            E  +++G+ PV + ++   +EA+  R+D   G +      + AG P +    A      +
Sbjct: 925  EPVDISGIWPV-RTVHDAISEALGERIDADTGLTTLRKLCYAAGVPYRTQWDAGAVVLEL 983

Query: 421  AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             + L  + C   +  + +DFP             + +P T P     S +G       A 
Sbjct: 984  YEHL--VECRTEQPTFYIDFPT------------SVSPLTRPH---RSKRG------VAE 1020

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +  
Sbjct: 1021 RWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAMEYA 1076

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1077 MPPTGGLGMGIDRVVMLITG-RSIRETLPFPLAK 1109


>gi|332878089|ref|ZP_08445819.1| asparagine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332684051|gb|EGJ56918.1| asparagine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 470

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 112/272 (41%), Gaps = 40/272 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEW 69
           L   D GS V + GWV   R    + F+ + D   I   QVVA+ D    E+ K      
Sbjct: 16  LKREDYGSEVNVKGWVRTRRGSKSVHFIALNDGSTINNVQVVADADKFDDELIK------ 69

Query: 70  VLCIDGLVMSRSAETINANIITGQ-IELSAQKIEIL-SVAEELPLPVFGER-EYPESIRF 126
            L   G  +S + E + + + +GQ +E+ A+ IE+L +   + P+   G+  EY  +   
Sbjct: 70  -LITTGACLSVTGELVQS-VGSGQAVEIQARAIEVLGTCGSDYPMQKKGQSMEYMRT--- 124

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            +  + LR +T       R  +  ++        F    TPI+T S  EGA       +V
Sbjct: 125 -HAHMRLRTNTFGAVFRIRHHMAMAIHRYFHEHGFFYFHTPIITGSDCEGAGQMF---QV 180

Query: 187 NQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPR 226
              + Y L +  +                    Q +  L A+     +   P FR E+  
Sbjct: 181 TTKNLYDLKKDDEGKIDYSDDFFGKTTSLTVSGQLEGELGATALGAIYTFGPTFRAENSN 240

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + R   EF+ ++ E++F +  D ++  E+ ++
Sbjct: 241 TPRHLAEFWMIEPEVAFNDIRDNMDLAEDFIK 272


>gi|169824319|ref|YP_001691930.1| asparaginyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831124|dbj|BAG08040.1| asparaginyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 461

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 109/266 (40%), Gaps = 36/266 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVR-SEWVLCIDGLV 77
           V + GW+   R    + F+++ D   +   Q+V   D+  FE A+ ++ S  ++ +  LV
Sbjct: 19  VEVGGWIKNSRFSKNVGFIELNDGTFFNPVQIVVGKDNEDFERAEKLKLSSAIIVVGKLV 78

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           ++ +++           E+ A K+ I+        P+  +R   E +R     L  R +T
Sbjct: 79  LTPNSKQ--------PFEIQASKV-IVEGESTDDYPLQKKRHTFEFLR-TILHLRPRTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            +     R+R+  ++        F+   TPI+T S  EGA +     RV       LP+ 
Sbjct: 129 FNAVFRVRSRLAFAIHKFFNERGFVYVHTPIITGSDAEGAGEMF---RVTTLDLDNLPKD 185

Query: 198 PQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                                 Q +    A  F   +   P FR E   + R   EF+ +
Sbjct: 186 DDGNVDFTQDFFSKSTNLTVSGQLQAEAYALAFRNVYTFGPTFRSEHSNTPRHAAEFWMM 245

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEE 263
           + E+ F + DD+ +  E+++R + ++
Sbjct: 246 EPEICFADLDDVCSLAEDMVRYIIKD 271



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 15/94 (15%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  G  R    E++ Q    +G +KE  +      ++GG+          H
Sbjct: 376 DLLVPGIGELIGGSQREERFELLDQKMDELGFNKEEYKWYLDLRKYGGV---------KH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           GG   G +R+VM + G  N+R+V  FP +   C+
Sbjct: 427 GGFGLGFERMVMYMTGMSNIRDVIPFPRTVGHCE 460


>gi|291297601|ref|YP_003508879.1| lysyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290566821|gb|ADD39786.1| lysyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 1100

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 31/263 (11%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RT +CG +          ++ G FV ++G V  +R HG + F  IRD  G  QV+   DS
Sbjct: 645 RTLACGQVARDFPDLPPDANTGRFVAVAGRVMLLRHHGKLSFATIRDWTGDLQVMVVGDS 704

Query: 57  ACFEIAKSVRSEWVLCIDG-LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
              +   +V     L ++G +V S+  E    ++++ +  L+A+ +        LP    
Sbjct: 705 ---DFRHTVDIGDHLGVEGEVVTSKRGEL---SVLSKKWTLTAKCL------HPLPDKHL 752

Query: 116 GEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
           G  + PE+ + + R LDL        ++  R  +I+S+R  +  + ++E  TPIL A   
Sbjct: 753 GLAD-PEA-KVRQRHLDLIVSPQARTDLRARGAVIHSLRTGLHDDGYLEVETPILQAIHG 810

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  AP+ Y + L   G ++ F++   FR+E       P E
Sbjct: 811 GANARPFVTHINAYDMRLY-LRIAPELYLKRLCVGGVEKVFELGRTFRNEGVSFKHNP-E 868

Query: 234 FYQLDMEMSFVEQDDILNTMENV 256
           F  L+   S+ +     NTM  +
Sbjct: 869 FTMLEAYQSYAD----YNTMREL 887



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 13/100 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G EI +           R  ++E  L A      + E+ E+       A +
Sbjct: 1004 AERWDLVAFGTEIGTAYSELIDPVEQRRRLTEQSLLAAGGDPEAMELDED----FLAALE 1059

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              MPP GG+  G+DR+VMLL G   +R+   FP+ +   D
Sbjct: 1060 YAMPPTGGLGIGVDRLVMLLTG-NGIRQTLPFPLVKPTVD 1098


>gi|227872716|ref|ZP_03991043.1| asparagine--tRNA ligase [Oribacterium sinus F0268]
 gi|227841441|gb|EEJ51744.1| asparagine--tRNA ligase [Oribacterium sinus F0268]
          Length = 462

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 116/303 (38%), Gaps = 50/303 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDG-LV 77
           V +SGWV   R      FL I D    T  QVV +     F  A  +     + ++G LV
Sbjct: 21  VMVSGWVRSNRDSKNFGFLVISDGTFFTPLQVVYHDSLENFAQAAKLGVGAAVIVEGKLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           EL A  I +    E    P+  +R   E +R     L  R +T
Sbjct: 81  ATPEAKQ--------PFELQASSITVEGDTE-ASYPLQKKRHTLEYLR-TIPHLRPRTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VP---SR 185
                  R+++  ++        F+   TPI+TAS  EGA +           VP     
Sbjct: 131 FQAVFRIRSQVAFALHSFFQERGFVYVHTPIITASDTEGAGEMFQVTTLPLESVPMEKGE 190

Query: 186 VNQGS-FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           V  G  F+    +     QL     A  F   +   P FR E   + R   EF+ ++ EM
Sbjct: 191 VQYGEDFFGKKTSLTVSGQLNGETFAQAFRDIYTFGPTFRAEKSNTQRHAAEFWMIEPEM 250

Query: 242 SFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRICYD 280
           +F + DD++   E++L+ V +          EF N            + V + F R+ Y 
Sbjct: 251 AFADLDDVMFIAEDMLKYVIQYVLVNAPEELEFLNQFVDKGLLDRLNHIVESEFARVTYT 310

Query: 281 DAI 283
           +A+
Sbjct: 311 EAV 313



 Score = 37.0 bits (84), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 22/40 (55%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   HGG   G +R VM + G  N+R+V  FP +   C+L
Sbjct: 423 GSTRHGGFGLGFERAVMYITGMSNIRDVLPFPRTVGNCEL 462


>gi|311112624|ref|YP_003983846.1| lysine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310944118|gb|ADP40412.1| lysine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 1110

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 113/246 (45%), Gaps = 28/246 (11%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKS-VRSEWVLCIDGLVM 78
           LSG V  +R HGG+IFL + +     Q++A         F + KS V +  +L + G   
Sbjct: 673 LSGRVRFIRNHGGVIFLTLSEEGKQVQIIAERSLVSEREFRLLKSAVDTGDILLVTG--T 730

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           + ++ T  A++I    +++A+ +         P+P +G    PE+ R + R  DL    +
Sbjct: 731 AGTSRTGTASVIVHSWQMAAKCLH--------PIP-YGALNDPEA-RIRKRSTDL---LV 777

Query: 139 H----KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQ-GSFY 192
           H    +N+  R+ +I ++R  +    F E  TPIL T      AR F   + +N  G+  
Sbjct: 778 HPQQLENLRMRSSLITAIRRTLDDAGFTEVETPILNTIHGGASARPF--KTFINAYGADL 835

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  G    +++   FR+E   +   P EF  L+    + +   +   
Sbjct: 836 TLRIAPELYLKRLVVGGLGAVYELGRDFRNEGADATHNP-EFTVLEAYKPYADYTVMRKL 894

Query: 253 MENVLR 258
            E +++
Sbjct: 895 TETLIK 900


>gi|260911445|ref|ZP_05918035.1| lysine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634444|gb|EEX52544.1| lysine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 576

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 134/287 (46%), Gaps = 35/287 (12%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLVMS 79
           ++G +   R  G   F++++D  G  QV    D  C +  K + +   + +L I   V  
Sbjct: 56  IAGRMMTRRVMGKASFMELQDSKGRIQVYITRDDICPDENKELYNTVFKRLLDIGDFV-- 113

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFL 131
              +       TG+I + A+++ +LS + + PLP+        + + + PE +RF+ R++
Sbjct: 114 -GVKGFVFRTQTGEISVHAKELTLLSKSIK-PLPIVKYKDGVAYDKFDDPE-LRFRQRYV 170

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQ 188
           DL   + + +  +KR ++I++MR       + E  TP L + +    AR F+   + +NQ
Sbjct: 171 DLVVNEGIKETFLKRAKVISTMRQFFDEAGYTEVETPTLQSIAGGATARPFITHFNALNQ 230

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME-------- 240
             F  +  A + Y + L+  GF+  ++I   FR+E       P EF  +++         
Sbjct: 231 EMFLRI--ATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTLMELYVQYKDYNW 287

Query: 241 -MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIR 284
            MSF E+  +L T+   + G  E   +G  +S    + R+   DAI+
Sbjct: 288 MMSFTER--LLETICVAVNGKPESVVDGQVISFKAPYRRLPILDAIK 332



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASG------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           +++L+ NG E+A+        I      V     ++ G  + ++ ++     R+ Q GMP
Sbjct: 409 RFELMVNGKELANAYSELNDPIDQEERFVEQMKLADKGDDEAMIIDK--DFLRSLQYGMP 466

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  GI  GIDR+VML+ G   ++EV LFP
Sbjct: 467 PTSGIGIGIDRLVMLMTGQTAIQEVLLFP 495


>gi|167769659|ref|ZP_02441712.1| hypothetical protein ANACOL_00993 [Anaerotruncus colihominis DSM
           17241]
 gi|167668020|gb|EDS12150.1| hypothetical protein ANACOL_00993 [Anaerotruncus colihominis DSM
           17241]
          Length = 657

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 113/243 (46%), Gaps = 11/243 (4%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F+D+RD  G  Q     D    EI     +++     G +
Sbjct: 66  GREVSIAGRMMSRRIMGKASFIDVRDASGRIQSYVRRD----EIGDEPYADFKKWDIGDI 121

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
           +    E        G+I + A +I +LS +       +   +  E +R++ R++DL  + 
Sbjct: 122 VGIRGEVFRTQ--KGEISIKAHEITLLSKSLLPLPEKWHGLKDTE-LRYRQRYVDLIVNP 178

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
            +    VKR++II ++R  + A+ +IE  TP+L A +    AR F+          Y + 
Sbjct: 179 EVKDTFVKRSKIITAIRSFLEAKGYIEVETPVLHAIAGGAAARPFITHHNALDIDMY-MR 237

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + + + L+  GFD+ ++I   FR+E   +   P EF  L++  ++ +   +++  E 
Sbjct: 238 IALELHLKRLIVGGFDKVYEIGRVFRNEGIDTRHNP-EFTLLELYEAYTDYHGMMDITEG 296

Query: 256 VLR 258
           ++R
Sbjct: 297 LVR 299



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 28/41 (68%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GG+  G+DR+VMLL  + ++R+V LFP  +  
Sbjct: 463 ALEYGMPPTGGLGIGVDRLVMLLTNSASIRDVLLFPTMKTL 503


>gi|295397836|ref|ZP_06807900.1| lysine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973933|gb|EFG49696.1| lysine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 506

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 115/260 (44%), Gaps = 10/260 (3%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           ++++   V ++G +   R  G   F +I+D  G  Q+    D    E    +   W    
Sbjct: 64  LAEMDDVVAIAGRLVTKRGKGKAGFGNIQDMSGNIQIYVRRDHIDEEDYDHL---WKKAD 120

Query: 74  DGLVMSRSAETINANIITGQIELSAQK-IEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            G ++      +  N  TG++ + A K + +      LP    G  +  +  R +Y  L 
Sbjct: 121 LGDIVGVEGTLMRTN--TGELSVKATKFVHLTKALRPLPDKYHGLTDVEQIYRHRYLDLI 178

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             R++  +   KR++II  +R  + + +++E  TP+L   +    AR F+          
Sbjct: 179 ANRESFDR-FTKRSQIIREVRHYLDSNDYLEVETPVLHNIAGGASARPFITHHNALDMEL 237

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G +R ++I   FR+E   +   P EF  L++  ++ +  D+++
Sbjct: 238 Y-LRIALELHLKRLVVGGMERVYEIGRVFRNEGIDTTHNP-EFTMLEVYTAYSKMTDVMD 295

Query: 252 TMENVLRGVFEEFSNGNTVS 271
            +E + + V E+     +++
Sbjct: 296 LVEGLFQSVAEKVLGTTSIT 315



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 30/40 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP  +N
Sbjct: 466 ALETGMPPTGGLGIGIDRMVMLLTDAQSIRDVLLFPTMRN 505


>gi|150010294|ref|YP_001305037.1| asparaginyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|166231669|sp|A6LIA1|SYN_PARD8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|149938718|gb|ABR45415.1| asparaginyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 468

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 111/272 (40%), Gaps = 36/272 (13%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L     G+ V + GWV   R    + F+ + D   I   Q+V + D    E  
Sbjct: 6   RTKIVDVLKSDAFGTTVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDVDKLGDEFL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYP 121
           K + +   + ++G++     +        GQ +E+ A +IEI   A+    P+   ++  
Sbjct: 66  KPITTGASISVNGILTQSQGK--------GQSVEIQATEIEIFGTADPATYPL---QKKG 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGA-R 178
            S+ F      LR  T     V R R  +  ++        F    TPI+TAS  EGA +
Sbjct: 115 HSMEFLREIAHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQ 174

Query: 179 DFLVPSR-------------VNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRD 222
            F V ++             + +  F+    +     QL   L A+   + +   P FR 
Sbjct: 175 MFQVTTKNLYDLKKDENGSIIYEDDFFGKQASLTVSGQLEGELAATALGQIYTFGPTFRA 234

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           E+  + R   EF+ ++ E++F   +DI + ME
Sbjct: 235 ENSNTPRHLAEFWMIEPEVAF---NDITDNME 263


>gi|85058993|ref|YP_454695.1| asparaginyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123738970|sp|Q2NU85|SYN_SODGM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|84779513|dbj|BAE74290.1| asparaginyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 466

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 108/273 (39%), Gaps = 44/273 (16%)

Query: 19  SFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RSEW 69
           S + + GWV   R    GI FL + D             +CF+  ++V        +++ 
Sbjct: 18  SEITVQGWVRTRRDSKAGISFLAVYD------------GSCFDPLQAVINNTLPNYQNDI 65

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKY 128
           +    G  +S +   + +     + E+ AQ IE+L  V +    P+  +R   E +R   
Sbjct: 66  LRLTSGCSVSVTGRVVESLGGGQRYEIQAQAIEVLGWVDDPDTYPMAAKRHSVEYLR--- 122

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++   M  + F   STP++TAS  EGA +    S +
Sbjct: 123 EVAHLRPRTNLIGAVARVRHTLAQAIHRFMDEQGFFWVSTPLITASDTEGAGEMFRVSTL 182

Query: 187 NQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDR 229
           +  +    P     Y +        L  SG            + +   P FR E+  + R
Sbjct: 183 DLENLPRTPDGKVNYDEDFFGKEAFLTVSGQLNGESYACALSKIYTFGPTFRAENSNTSR 242

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
              EF+  + E++F   DD     E +L+ VF+
Sbjct: 243 HLAEFWMAEPEVAFATLDDAAGLAEAMLKYVFQ 275


>gi|67624609|ref|XP_668587.1| aspartate-tRNA ligase F10M23.210 [Cryptosporidium hominis TU502]
 gi|54659782|gb|EAL38345.1| aspartate-tRNA ligase F10M23.210 [Cryptosporidium hominis]
          Length = 82

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 4/76 (5%)

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G EI SG  R H  +++++     G+S+  + +       +F+ G PPHGG   G++R++
Sbjct: 3   GEEILSGAQRVHDYDLLVKRCQECGVSEHSLRDYLN----SFKLGAPPHGGCGIGLERVI 58

Query: 548 MLLLGAKNVREVSLFP 563
           ML L   N+R+ S+FP
Sbjct: 59  MLFLNLGNIRKSSMFP 74


>gi|312884020|ref|ZP_07743737.1| lysyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368478|gb|EFP96013.1| lysyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 505

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 18/228 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWV-LCIDGLVMSRSAETINANIITGQIEL 96
           FL I++  G  Q  A  D     + K ++ ++  L I  ++  + A   +     G + +
Sbjct: 81  FLAIQETSGRIQAYAAKD-----VQKELKEKYQGLDIGDIIGVKGALHKSGK---GDLYV 132

Query: 97  SAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRC 154
           + +  E+L+ A   PLP        + +R++ R++DL   +D+    IV R++++ ++R 
Sbjct: 133 NMESYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNQDSREAFIV-RSKLVAAIRN 190

Query: 155 RMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
            M ++ ++E  TP++    P GA  R F+          Y L  AP+ Y + L+  GFDR
Sbjct: 191 FMSSKGYLEVETPMMHVI-PGGATARPFITHHNALDIDMY-LRVAPELYLKRLVVGGFDR 248

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            F+I   FR+E   S R   EF  ++   ++ +  D+++  E +L  V
Sbjct: 249 VFEINRNFRNEG-LSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSSV 295



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ ML      +R+V LFP
Sbjct: 464 ALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFP 499


>gi|291087320|ref|ZP_06346111.2| asparagine--tRNA ligase [Clostridium sp. M62/1]
 gi|291075369|gb|EFE12733.1| asparagine--tRNA ligase [Clostridium sp. M62/1]
          Length = 550

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 107/266 (40%), Gaps = 34/266 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
           +G  +R+ GWV  VR      F+ + D  ++   QVV + +   F EI+K      +L  
Sbjct: 104 LGKEIRIGGWVRSVRDSKTFGFIVVSDGSYFETLQVVYHDNMENFSEISKLNVGAAILVK 163

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP-LPVFGEREYPESIRFKYRFLD 132
             LV +  A+               Q  E+L      P  P+  +R   E +R     L 
Sbjct: 164 GTLVATPEAKQ----------PFEIQATEVLVEGASSPDYPLQKKRHSLEYLR-TISHLR 212

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VP 183
            R +T       R+ I  ++       +F+   TP++T S  EGA +           VP
Sbjct: 213 PRTNTFQAVFRVRSLIAYAIHQYFQERDFVYVHTPLITGSDCEGAGEMFQVTTMDLANVP 272

Query: 184 SRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            + + GS      F+  P       QL     A  F   +   P FR E+  + R   EF
Sbjct: 273 -KASDGSVDFSQDFFGKPTNLTVSGQLNAETYAMAFRNVYTFGPTFRAENSNTTRHAAEF 331

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGV 260
           + ++ EM+F + +D +   E++L+ V
Sbjct: 332 WMIEPEMAFADLNDNMALAESMLKYV 357



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E +L     +G+ KE     +G      + G   H G   G +R VM 
Sbjct: 473 EIIGGSQREDDYEKLLARMDELGLKKE----DYGFYLDLRKYGSVRHSGFGLGFERCVMY 528

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 529 LTGMGNIRDVIPFPRTVNNCEL 550


>gi|313204393|ref|YP_004043050.1| asparaginyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312443709|gb|ADQ80065.1| asparaginyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 465

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 104/261 (39%), Gaps = 29/261 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  +D G+ V + GWV   R +  + F+ + D   I   QVVA+ +    E  
Sbjct: 3   RTVIVDALKRTDFGAEVNIKGWVRTRRGNKNVSFIALNDGSTINNIQVVADNEKFGDEYL 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYP 121
           K + +   + + G ++    +        GQ +E+ A+KIEI  +A+    P+  +    
Sbjct: 63  KPITTGACISVTGKLVESLGQ--------GQHVEIQAEKIEIYGIADPESYPLQKKGHTM 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +   L  R +T       R  +  ++        F    TPI+TAS  EGA    
Sbjct: 115 EFLR-EIAHLRPRTNTFGAVFRVRHNMAMAIHTFFHERGFFYFHTPIITASDCEGAGQMF 173

Query: 182 VPSRVN--------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDED 224
             + +N                 F+    +     QL   L A      +   P FR E+
Sbjct: 174 QVTTMNLYDLKKDETGQIDYSNDFFGKQASLTVSGQLEGELAAMSMGAIYTFGPTFRAEN 233

Query: 225 PRSDRLPGEFYQLDMEMSFVE 245
             + R   EF+ ++ E++F E
Sbjct: 234 SNTPRHLSEFWMIEPEVAFNE 254


>gi|163758949|ref|ZP_02166036.1| putative lysyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162284239|gb|EDQ34523.1| putative lysyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 498

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 128/282 (45%), Gaps = 27/282 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            G  V ++G V+  R  G  +F+DI D  G  Q+ ++ D+      ++ R    L   G 
Sbjct: 59  TGDIVTVAGRVYSSRNSG--MFMDIHDASGKVQIFSHKDTT----PEAARELLPLIDLGD 112

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++  + E        G++ ++A +I +L+ +  LP+P          +R++ R LD+  +
Sbjct: 113 IIGVTGEVRRTK--RGELTVNAHEITMLTKSL-LPMPEKWHGLSDIELRYRKRHLDILSN 169

Query: 137 TLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA-- 193
              K    +R++I++ +R  M  + F+E  TP+L +       +   P + +  +     
Sbjct: 170 ADSKVRFQQRSKIVSGIRRFMEDDGFMEIETPMLHSVYGGATAE---PFKTHHNTLKLDM 226

Query: 194 -LPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
            L  AP+ Y +  + SG  D+ F++   FR+E   +   P EF  L+   ++ + +DI++
Sbjct: 227 FLRIAPELYLKRALVSGLTDKVFEVNRNFRNEGVSTRHNP-EFTMLECYWAYADYEDIMD 285

Query: 252 TMENVLRGVF------EEFSNGNT---VSNNFLRICYDDAIR 284
            +E +   +        +F  G T       F R+   DA++
Sbjct: 286 LVERLFETLALTIHGKTDFMYGETEFSFKGPFKRVPMPDAVK 327



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 12/98 (12%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++  CN +E+ +           R  M E + QA +  G + + +++ F     A   G
Sbjct: 405 RFETYCNTWELGNAFSELNDPEEQRKRMVEQLEQAHAR-GETDKRLDDEF---LDAIDQG 460

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR+VMLL  A ++R+V LFP  +   D
Sbjct: 461 MPPAGGLGIGVDRLVMLLTDAPSIRDVILFPARKTRAD 498


>gi|288927864|ref|ZP_06421711.1| lysine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330698|gb|EFC69282.1| lysine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 576

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 133/287 (46%), Gaps = 35/287 (12%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLVMS 79
           ++G +   R  G   F++++D  G  QV    D  C    K + +   + +L I   V  
Sbjct: 56  IAGRMMTRRVMGKASFMELQDSKGRIQVYVTRDDICPNENKELYNTVFKRLLDIGDFVGV 115

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFL 131
           R          TG+I + A+++ +LS + + PLP+        + + + PE +RF+ R++
Sbjct: 116 RG---FVFRTQTGEISVHAKELTLLSKSIK-PLPIVKYKDGVAYDKFDDPE-LRFRQRYV 170

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQ 188
           DL   + + +  +KR ++I++MR       + E  TP L + +    AR F+   + +NQ
Sbjct: 171 DLVVNEGVKETFLKRAKVISTMRQFFDEAGYTEVETPTLQSIAGGATARPFVTHFNALNQ 230

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME-------- 240
             F  +  A + Y + L+  GF+  ++I   FR+E       P EF  +++         
Sbjct: 231 EMFLRI--ATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTLMELYVQYKDYNW 287

Query: 241 -MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIR 284
            MSF E+  +L T+   + G  E   +G  +S    + R+   DAI+
Sbjct: 288 MMSFTER--LLETICVAVNGKPESVVDGQVISFKAPYRRLPILDAIK 332



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASG------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           +++L+ NG E+A+        I      V     ++ G  + ++ ++     R+ Q GMP
Sbjct: 409 RFELMVNGKELANAYSELNDPIDQEERFVEQMKLADKGDDEAMIIDK--DFLRSLQYGMP 466

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  GI  GIDR+VML+ G   ++EV LFP
Sbjct: 467 PTSGIGIGIDRLVMLMTGQTAIQEVLLFP 495


>gi|332534604|ref|ZP_08410437.1| asparaginyl-tRNA synthetase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035954|gb|EGI72434.1| asparaginyl-tRNA synthetase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 465

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 108/275 (39%), Gaps = 45/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL + D             +CF+  ++V    +   D 
Sbjct: 16  VDSQVTIKGWIRTRRDSKAGISFLAVHD------------GSCFDPIQAVVPNSLNNYDE 63

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +    +  +++   +  Q     Q  EI + +    + V G  E P+S     +   +  
Sbjct: 64  VTSLTAGCSVSVTGVLVQSAGQGQSYEIQANS----VTVLGWVENPDSYPMSAKRHSIEY 119

Query: 136 DTLHKNIVKRTRIINSM----RCRMIA-------ENFIECSTPILTASSPEGARDFLVPS 184
              H ++  RT +I ++     C   A       + F   STPI+TAS  EGA +    S
Sbjct: 120 LREHAHLRPRTNMIGAVTRVRNCLAQAIHRFYHEQGFYWISTPIITASDCEGAGEMFRVS 179

Query: 185 RVNQGSFYALPQAPQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRS 227
            ++  +     +    Y +                    AS   + +   P FR E+  +
Sbjct: 180 TLDMQNLPLTDKGDVDYSEDFFGKEAFLTVSGQLNGETYASAMSKIYTFGPTFRAENSNT 239

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + +DI    EN+L+ VF+
Sbjct: 240 SRHLAEFWMVEPEVAFADLEDIAKLAENMLKYVFK 274



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 7/86 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF-QCGMPPHGGIA 540
           D+V  G  EI  G  R    +V+      +G++KE         YR   + G  PH G  
Sbjct: 380 DVVAPGIGEIIGGSQREERLDVLDARLEEMGLNKEDY-----SWYRDLRKYGSVPHSGFG 434

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G +R+V  + G  NVR+V  FP ++
Sbjct: 435 LGFERLVAYVTGMGNVRDVIAFPRTK 460


>gi|311107123|ref|YP_003979976.1| lysyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310761812|gb|ADP17261.1| lysyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 507

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 21/245 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V+++G +   R  G   F  ++D  G  Q+  +      E + +   +W    ++ I+G 
Sbjct: 67  VKVAGRMMLKRVMGKASFATLQDSTGRIQIYLD-RGTLGEDSYAAFKQWDIGDIIAIEGS 125

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           V   +          G++ + A    +LS +   PLP        + +R++ R++DL   
Sbjct: 126 VFKTN---------KGELSVHAASARLLSKSLR-PLPDKFHGVADQELRYRQRYVDLIMT 175

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           D   +    R++ + S+R  M+   F+E  TP+L    P GA  + F+          Y 
Sbjct: 176 DATRRTFEARSKAVGSIRQFMLNAGFLEVETPMLH-PIPGGAAAKPFVTHHNALDMEMY- 233

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   +F E   +++  
Sbjct: 234 LRIAPELYLKRLIVGGFERVFEVNRNFRNEGV-SPRHNPEFTMMEFYAAFAEYRWLMDFT 292

Query: 254 ENVLR 258
           E ++R
Sbjct: 293 EELIR 297



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E   + F +   +K+  +     +   Y RA + GMPP 
Sbjct: 415 RFELFMTGREIANGFSELNDPEDQAERFRSQVEAKDAGDEEAMFYDADYIRALEYGMPPT 474

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 475 GGCGIGIDRLVMLLTDSPSIRDVILFP 501


>gi|302918386|ref|XP_003052646.1| hypothetical protein NECHADRAFT_91963 [Nectria haematococca mpVI
           77-13-4]
 gi|256733586|gb|EEU46933.1| hypothetical protein NECHADRAFT_91963 [Nectria haematococca mpVI
           77-13-4]
          Length = 581

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 125/294 (42%), Gaps = 52/294 (17%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDH--YGITQVVA-NPDSACFEIAKSVR 66
           +LG   +G  ++L  W+   R  G  + F+++R+   + I  VVA +P+ A   ++K + 
Sbjct: 97  NLGDEHLGKTIKLRAWIQNARMQGAKMAFVELREERDWAIQAVVAASPEGAP--VSKQM- 153

Query: 67  SEWV--LCIDGLVM-----SRSAETINANIITGQIELSAQKIEILSVAEEL--------- 110
            +W+  L ++G V+      +  E + + +     EL   K  ++S   ++         
Sbjct: 154 VKWIGGLNLEGYVLVEAKVEKPLEPVKS-VKVSNYELHLTKCYVISPGPQVLGMGLAVAN 212

Query: 111 -PLPVFGEREYPESIRFKYRFLD---------------LRRDTLHKNIVKRTRIIN-SMR 153
            P+  F + +    +      +D               L    +HK    +  I +  M 
Sbjct: 213 RPVTNFDDEDAGGPVEEVKEGVDNLSLENAPGASMATHLNNPVMHKRAPVQQAIADVRMT 272

Query: 154 CRMI------AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
            R +      A +F++   P L  ++ EG  +       ++ +F A  Q+PQ YKQ  +A
Sbjct: 273 VRKLFSEYLEARDFVQFEPPCLIGAASEGGSNVFGLPYFDKQAFLA--QSPQFYKQYEIA 330

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            G  R F I P FR E+  + R   EF  LD+EM   E +D  + +  +L GV 
Sbjct: 331 GGRKRVFCIGPVFRAENSNTPRHMTEFTGLDLEM---EIEDHYHEVREMLEGVL 381



 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 13/90 (14%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS------KEVVENRFGGLYRAFQCGMPP 535
           YD    G EI SGG R H+   +       GI       KE V+     ++R+   G+PP
Sbjct: 493 YDFFMRGQEILSGGQRVHVPATLEARIRRKGIDPTSQGIKEYVD-----IFRS--AGVPP 545

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           HGG   G+DR+V   L   +V   S +P +
Sbjct: 546 HGGGGIGLDRVVAWYLNLPSVHLASYYPRT 575


>gi|222111774|ref|YP_002554038.1| lysyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|221731218|gb|ACM34038.1| lysyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 515

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 101/217 (46%), Gaps = 16/217 (7%)

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
           AE       TG++ +   ++ +L+ +   P+P        + ++++ R++DL  D    +
Sbjct: 132 AEGTLMKTKTGELSVKVSRLRLLTKSLR-PMPDKFHGVADQEVKYRQRYVDLMTDEAARR 190

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
             V R++ + S+R  M+   F+E  TP+L    P GA  + F+      +   + L  AP
Sbjct: 191 RFVARSKAVGSIRSFMMEHGFLEVETPMLH-PIPGGANAKPFVTHHNALEQEMF-LRIAP 248

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D+++  E ++R
Sbjct: 249 ELYLKRLIVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYRDLMDFTEALVR 307

Query: 259 -------GVFEEFSNGNTV--SNNFLRICYDDAIRRY 286
                  G  +    G  V  +  F R+   +AI ++
Sbjct: 308 DAALKATGTLQLTYGGRAVDLAQPFQRLTIREAIYQH 344



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
           + NDL      +++L   G E  +G    + +E     F     +K+  ++         
Sbjct: 412 RANDLRPEVTERFELYITGREFGNGFSELNDAEDQAARFHAQVAAKDAGDDEAMFFDHDF 471

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GMPP GG   GIDR++MLL  + ++R+V LFP
Sbjct: 472 VRALEYGMPPTGGCGIGIDRLMMLLTDSPSIRDVILFP 509


>gi|15827030|ref|NP_301293.1| lysyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221229508|ref|YP_002502924.1| lysyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|13432212|sp|P46861|SYK_MYCLE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|13092577|emb|CAC29741.1| putative lysyl-tRNA synthase [Mycobacterium leprae]
 gi|219932615|emb|CAR70326.1| putative lysyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 507

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 121/275 (44%), Gaps = 30/275 (10%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPD 55
           RTH+  ++          S     V ++G V   R  G + F  ++D  G   QV+ + +
Sbjct: 40  RTHTLAEVRAAYPDLATDSATDDIVGIAGRVIFARNSGKLCFATLQDGDGTNLQVMISLN 99

Query: 56  SACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
               E   +    W + +D G ++      I++   +G++ + A   +++S +   PLPV
Sbjct: 100 KVGSETLDA----WKVDVDLGDIVYVHGNVISSR--SGELSVLADSWQMVSKSLR-PLPV 152

Query: 115 FGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
              +E  E  R + R++DL      R   H+ I     +I ++R  +    F+E  TP+L
Sbjct: 153 -AHKEMSEESRVRQRYVDLIVCPQVRIVAHQRIA----VIRAIRTALERRGFLEVETPML 207

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T +    AR F+  S       Y L  AP+ + +  +  GFD+ F++   FR+E   S 
Sbjct: 208 QTLAGGAAARPFVTHSNALDIDLY-LRIAPELFLKRCIVGGFDKVFELNRVFRNEGADST 266

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
             P EF  L+   ++   DD       +++ V +E
Sbjct: 267 HSP-EFSMLETYQTYGTYDDSAVVTREIIQEVADE 300


>gi|307128652|ref|YP_003880682.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306483114|gb|ADM89984.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 463

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 123/317 (38%), Gaps = 52/317 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IAKSVRSEWVLCIDG-LV 77
           + + GWV   R +    FL+I D   +  +    D+  F     K +     L I G LV
Sbjct: 23  INVKGWVKHFRYN---YFLNINDGSSLKDLQIIIDNKYFNNFFLKKINIGVSLEIIGILV 79

Query: 78  MSRSAETINANIITGQIELSAQKIEILSV--AEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +S+  +          IE+ A +I+I      E L   +  ++++      +  +L  R 
Sbjct: 80  LSKGKKQ--------NIEIYANRIKIFGSFKMEYLQKTILQQKKHSLKKLREQSYLRFRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +     +  R  I  S+      +NF   +TPI+T    EGA D    +  N        
Sbjct: 132 NIFSSIMRIRHHIAFSIHKFFYKKNFFYINTPIITTYDTEGAGDMFKVTTFNFKKIPINE 191

Query: 189 -----------GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                      G F  L  + Q   +   ASG  + +   P FR E   + R   EF+ +
Sbjct: 192 LGEINNTLDFFGDFTYLTVSGQLQGEA-AASGLGKIYTFGPTFRAEKSNTFRHLSEFWMI 250

Query: 238 DMEMSFVEQDDILNTMENVLRGV-------------FEEFSNGN----TVSNNFLRICYD 280
           + EM+F + +  +   EN+L+ V             F E  N N     ++++F RI Y 
Sbjct: 251 EPEMAFYKLNHNMILAENLLKYVIKYVIKHCYDDLFFLEKKNINRLYSILNSSFQRISYT 310

Query: 281 DAIRRYGTDKPDLRNPI 297
           +AI+   + K     P+
Sbjct: 311 NAIKIIKSSKYKFFFPV 327


>gi|121595553|ref|YP_987449.1| lysyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|120607633|gb|ABM43373.1| lysyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 515

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 101/217 (46%), Gaps = 16/217 (7%)

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
           AE       TG++ +   ++ +L+ +   P+P        + ++++ R++DL  D    +
Sbjct: 132 AEGTLMKTKTGELSVKVSRLRLLTKSLR-PMPDKFHGVADQEVKYRQRYVDLMTDEAARR 190

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
             V R++ + S+R  M+   F+E  TP+L    P GA  + F+      +   + L  AP
Sbjct: 191 RFVARSKAVGSIRSFMMEHGFLEVETPMLH-PIPGGANAKPFVTHHNALEQEMF-LRIAP 248

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D+++  E ++R
Sbjct: 249 ELYLKRLIVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYRDLMDFTEALVR 307

Query: 259 -------GVFEEFSNGNTV--SNNFLRICYDDAIRRY 286
                  G  +    G  V  +  F R+   +AI ++
Sbjct: 308 DAALKATGTLQLTYGGRAVDLAQPFQRLTIREAIYQH 344



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
           + NDL      +++L   G E  +G    + +E     F     +K+  ++         
Sbjct: 412 RANDLRPEVTERFELYITGREFGNGFSELNDAEDQAARFHAQVAAKDAGDDEAMFFDHDF 471

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GMPP GG   GIDR++MLL  + ++R+V LFP
Sbjct: 472 VRALEYGMPPTGGCGIGIDRLMMLLTDSPSIRDVILFP 509


>gi|257125882|ref|YP_003163996.1| asparaginyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049821|gb|ACV39005.1| asparaginyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 479

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/308 (20%), Positives = 121/308 (39%), Gaps = 51/308 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCID 74
           +G  + ++GWV ++R      F+++ D    T  QVV       FE    +     + + 
Sbjct: 33  LGKEIEINGWVKKIRSQKNFGFIELNDGTFFTGIQVVFEEGLENFEEISKLTISTSVKVT 92

Query: 75  GLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           G+V+         ++  GQ  E+ A KI +   A+    P+  +R   E +R     L  
Sbjct: 93  GIVVE--------SVGKGQAYEIKATKISVYQKADS-DYPLQNKRHSFEFLR-TIAHLRP 142

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +        R+ +  ++      +NF+   TPI+T S  EGA +    + ++  +   
Sbjct: 143 RTNAFFATFRVRSILSYAIHKFFQEKNFVYVQTPIITGSDAEGAGEMFRLTTLDINNIPK 202

Query: 194 LPQAPQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                  +KQ                    A+ F   +   P FR E   + +   EF+ 
Sbjct: 203 TENGSIDFKQDFFGKEANLTVSGQLNVETFATAFKNTYTFGPTFRAEKSNTPKHAAEFWM 262

Query: 237 LDMEMSFVEQDDILNTMENVLRGV--------------FEEFSNGN-------TVSNNFL 275
           ++ E++F + D  ++ +E +++ +              F +F + +        V+N F 
Sbjct: 263 MEPEIAFADLDVNMDVIEEMIKYIVNYVRENAKEEMEFFNKFVDKDLFNRLDTLVNNEFG 322

Query: 276 RICYDDAI 283
           RI Y +AI
Sbjct: 323 RITYTEAI 330



 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G  R    E++L   + +G+ +E     +       + G  PH G   
Sbjct: 394 DLLAPGIGEIVGGSQREDDYEILLGKINEMGLKEE----DYWWYLDLRKYGSVPHSGFGL 449

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G DR++M + G  N+R+V  FP +
Sbjct: 450 GFDRMLMYITGMTNIRDVIPFPRT 473


>gi|51598364|ref|YP_072552.1| asparaginyl-tRNA synthetase [Borrelia garinii PBi]
 gi|59798512|sp|Q662R1|SYN_BORGA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|51572935|gb|AAU06960.1| asparaginyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 462

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 28/279 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF--EIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F  +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFTEKDLKKLTTGASIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++  A+    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKIYSFNVIGEADSKTYPLQKKRHTFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----- 187
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKPN 185

Query: 188 --------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NSLSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           ++ EM+F + +D ++  E++L+ +     N  +   +FL
Sbjct: 246 IEPEMAFYKLNDNISLAEDLLKYLLSSILNECSQDMDFL 284


>gi|325281305|ref|YP_004253847.1| Asparaginyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324313114|gb|ADY33667.1| Asparaginyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 487

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 29/267 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69
           L   D    V +SGWV   R +  + F+ + D   I   Q+V + ++   E+ K V +  
Sbjct: 18  LQSGDCDKEVEISGWVRTKRGNKQVNFIALNDGSTINNIQIVVDMNNISEELMKKVTTGA 77

Query: 70  VLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            + + GL++            +GQ  E+ A ++++L  A+    P+  ++   E +R  +
Sbjct: 78  AIHVKGLLVKSEG--------SGQSHEIQAHELDVLGEADPEKYPIQPKKHSLEFLR-DH 128

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV------ 182
             L  R +        R  +  ++        F    TP++TAS  EGA +         
Sbjct: 129 AHLRFRTNMFGAIFRIRHAMAFAIHQYFDQHGFFYLHTPLITASDCEGAGEMFRVTTLDP 188

Query: 183 --PSRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLP 231
             P    +G       F+          QL   L A    + +   P FR E+  + R  
Sbjct: 189 KNPPLTEEGEVDFRQDFFGKATNLTVSGQLEGELGAMALGKIYTFGPTFRAENSNTTRHL 248

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLR 258
            EF+ ++ E +F + DD ++  E+ L+
Sbjct: 249 SEFWMIEPEAAFYDLDDNMDLAEDFLK 275


>gi|218887177|ref|YP_002436498.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218758131|gb|ACL09030.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 471

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/263 (21%), Positives = 96/263 (36%), Gaps = 29/263 (11%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDGL 76
           + +R+ GWV   R   G  FL+I D   +  +    D A   F + K V +       G 
Sbjct: 24  AHIRICGWVRTRRDAKGFSFLEINDGSCLANIQCIVDEALPDFAVIKDVNT-------GA 76

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            +    E + +     + E+ A  + +L  A+    P+  +R   E +R     L  R +
Sbjct: 77  AVDVRGELVESPGKGQKWEVRAAALTLLGGADAEAYPLQKKRHSDEFLR-TIAHLRARTN 135

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                   R+    ++        F    TPILT S  EGA +    + +        P 
Sbjct: 136 KFGAAFRIRSEAAYAIHEFFRERGFFHVHTPILTGSDCEGAGEMFRVTTLPVSGASGTPV 195

Query: 197 APQ-------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            P                    Q +   +A G  + +   P FR E+  + R   EF+ +
Sbjct: 196 PPSGNHFEADFFGKECNLTVSGQLEAEALAMGLGKVYTFGPTFRAENSNTARHAAEFWMI 255

Query: 238 DMEMSFVEQDDILNTMENVLRGV 260
           + E +F + +D +   E + R V
Sbjct: 256 EPEFAFADLNDDMELAEAMTRTV 278


>gi|84998476|ref|XP_953959.1| asparaginyl-tRNA synthetase (chloroplast/mitochondrial precursor)
           [Theileria annulata]
 gi|65304957|emb|CAI73282.1| asparaginyl-tRNA synthetase (chloroplast/mitochondrial precursor),
           putative [Theileria annulata]
          Length = 590

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 4/79 (5%)

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G+EIA G IR H  EV+ +      +S E  E ++  L +       PHGG   G DR+V
Sbjct: 515 GYEIAGGSIREHEYEVLKRKMDERKVSGEEYE-KYINLRKNIYL---PHGGFGVGFDRLV 570

Query: 548 MLLLGAKNVREVSLFPMSQ 566
           ML+   +N+++V+ FP+++
Sbjct: 571 MLMTMKENIKDVTPFPVTK 589



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 100/262 (38%), Gaps = 26/262 (9%)

Query: 21  VRLSGWVHRVR--PHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLC---I 73
           V   G+V  +R      + F+DI D   +   Q+V N  +   E+      + +     I
Sbjct: 126 VNTRGYVQEIRRINSQNLYFIDINDGSTLANLQIVVNKANNFKELELLKNGDHIYAAGTI 185

Query: 74  D---GLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYR 129
           D   G+   RS    +  I     E    K++I   +E EL  PV    EY +    KY 
Sbjct: 186 DKRRGVPSERSLSDFDLYINHDNPE---HKLKIHKYSENELENPVIPNIEYSDEYLRKYT 242

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT------------ASSPEGA 177
               R       I  R+ I + +     ++NF E  TP LT             ++ +G 
Sbjct: 243 HFRFRNKQFRSIIGIRSAIKSYIHEFFQSKNFTEVDTPCLTHMNCENLVPLTLKTASDGT 302

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
               + S   + +      +  Q +      G  + ++I P FR E   + R   EF+ +
Sbjct: 303 NLDTLGSENTEKNIPVNLSSTGQMELEFACYGLGKVWKIGPSFRAERSDTIRHANEFWMI 362

Query: 238 DMEMSFVEQDDILNTMENVLRG 259
           + E+       ++N ++ ++RG
Sbjct: 363 EAELPDASLKGMINLIQEMVRG 384


>gi|71276051|ref|ZP_00652332.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Dixon]
 gi|71899473|ref|ZP_00681631.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Ann-1]
 gi|170729665|ref|YP_001775098.1| lysyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|238687952|sp|B0U572|SYK_XYLFM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71163134|gb|EAO12855.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Dixon]
 gi|71730786|gb|EAO32859.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Ann-1]
 gi|167964458|gb|ACA11468.1| lysyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 506

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 23/278 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ------VVANPDSACFEIAKSVRSEWVLCID 74
           VR++G +   R  G   F  I+D  G  Q      V+     A F++      + +    
Sbjct: 70  VRMAGRLMAKRLMGKASFAQIQDESGRIQLLIQSNVLGEDSYAAFKVLDV--GDIIAVEG 127

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           GL  +R          TG++ +    + +L+ A   PLP           R++ R++DL 
Sbjct: 128 GLTRTR----------TGELSVKVNVLRLLTKALR-PLPDKWHGLTDVEQRYRQRYVDLI 176

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
                + I +KR++II ++R  + A  F+E  TP++        A+ F+          Y
Sbjct: 177 VTPESREIFIKRSKIIRALRTWLDARLFLEVETPMMHYIPGGAAAKPFVTYHNALDLELY 236

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  G +R ++I   FR+E   +   P EF  L++  ++    ++++ 
Sbjct: 237 -LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRHNP-EFTMLELYEAYSTYHEVMDL 294

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
            E ++R   +       V  +  +I      RR+  D+
Sbjct: 295 AETMIRDTAQSVLGTTQVIWDGAQIDLGPIFRRWRMDE 332



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY 526
           + +D+ S    +++L  NG EIA+G    +  E     F     +KE  ++    +   Y
Sbjct: 403 RESDIESGYTDRFELFINGKEIANGFSELNDPEEQAMRFQKQVEAKEGGDDEAMYYDADY 462

Query: 527 -RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  G+DR+VMLL G+ ++R+V LFP
Sbjct: 463 IRALEYGMAPTGGLGIGVDRLVMLLTGSTSIRDVLLFP 500


>gi|301062195|ref|ZP_07202877.1| asparagine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300443707|gb|EFK07790.1| asparagine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 463

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 112/276 (40%), Gaps = 26/276 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGIT--QVVANPDSACFEI 61
           RT     L    VG+ V ++GWV   R   GG  F++I D   +   Q+VA+ D + +  
Sbjct: 3   RTRISEVLKSDAVGTHVTVAGWVRTRRDSKGGFSFIEINDGSALQGLQIVADQDLSNY-- 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
               RS  +    G  ++     +++     ++EL A  I +L  A+    P+  +R   
Sbjct: 61  ----RSHVLRLQTGCSVTAEGTLVSSPGKGQKVELKADTIHVLGWADPESYPLQKKRHSF 116

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF- 180
           E +R     L  R +T       R     ++      + F+   TPILT S  EGA +  
Sbjct: 117 EFLR-GIAHLRPRTNTFGAVARVRNAAAFAIHRFFQEKGFLYIHTPILTGSDCEGAGEMF 175

Query: 181 ----LVPSRV---NQGS-----FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDP 225
               L P+ V   N G+     F+  P       QL   + A      +   P FR E+ 
Sbjct: 176 RVTTLDPASVPLKNGGADYSQDFFCGPSHLTVSGQLEAEIYALAVGDVYTFGPTFRAENS 235

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + R   EF+ ++ EM+F +    +      L+ VF
Sbjct: 236 NTSRHLAEFWMVEPEMAFCDLKGNVTLAVEFLKYVF 271


>gi|256839145|ref|ZP_05544655.1| asparaginyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256740064|gb|EEU53388.1| asparaginyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 468

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 111/272 (40%), Gaps = 36/272 (13%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L     G+ V + GWV   R    + F+ + D   I   Q+V + D    E  
Sbjct: 6   RTKIVDVLKSEAFGTTVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDVDKLGDEFL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYP 121
           K + +   + ++G++     +        GQ +E+ A +IEI   A+    P+   ++  
Sbjct: 66  KPITTGASISVNGILTQSQGK--------GQSVEIQATEIEIFGTADPATYPL---QKKG 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGA-R 178
            S+ F      LR  T     V R R  +  ++        F    TPI+TAS  EGA +
Sbjct: 115 HSMEFLREIAHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQ 174

Query: 179 DFLVPSR-------------VNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRD 222
            F V ++             + +  F+    +     QL   L A+   + +   P FR 
Sbjct: 175 MFQVTTKNLYDLKKDENGSIIYEDDFFGKQASLTVSGQLEGELAATALGQIYTFGPTFRA 234

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           E+  + R   EF+ ++ E++F   +DI + ME
Sbjct: 235 ENSNTPRHLAEFWMIEPEVAF---NDIADNME 263


>gi|119498141|ref|XP_001265828.1| aspartyl-tRNA synthetase Dps1, putative [Neosartorya fischeri NRRL
           181]
 gi|119413992|gb|EAW23931.1| aspartyl-tRNA synthetase Dps1, putative [Neosartorya fischeri NRRL
           181]
          Length = 555

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 35/214 (16%)

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF-GEREYPESI--- 124
           ++ + G+V   +    +A +    +E+  QK+ ++S  A+ LP+ V   ER  PE+    
Sbjct: 151 IVQVTGIVKKPAIPISSATL--SNLEIHIQKVYMISEAAQMLPMQVKDAERPPPETTEEG 208

Query: 125 ---------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS---- 165
                          R   R LDL+ +T      +    I+S    + AE  I+      
Sbjct: 209 NLVDAEGAPIVTLKTRLDNRVLDLQTET-----SQAITWISSGVAELFAEYMIKSGSRWI 263

Query: 166 -TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP L  ++ EG  +        + ++ A  Q+PQ YKQ+ +A   +  F+IAP FR E+
Sbjct: 264 FTPKLVGAATEGGSNVFEVKYFKRNAYLA--QSPQLYKQMCIAGDMESVFEIAPVFRAEE 321

Query: 225 PRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257
             + R   EF  LD E +F     ++L   E++L
Sbjct: 322 SNTHRHLTEFAGLDFEKTFRSHYHEVLEFAEDLL 355



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R +  + + ++    G+  +  +  F     AF+ G PPH G   
Sbjct: 468 YDFFMRGEEIMSGAQRINDIKELEESMIAKGLDPK--QEGFEDYLAAFRQGCPPHAGGGL 525

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIVM  LG  NVR  SLFP
Sbjct: 526 GLNRIVMFFLGLPNVRLASLFP 547


>gi|37525688|ref|NP_929032.1| asparaginyl-tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|59798577|sp|Q7N622|SYN_PHOLL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|36785117|emb|CAE14046.1| asparaginyl-tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 466

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 110/270 (40%), Gaps = 34/270 (12%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           V S V + GW+   R    GI FL + D   +   Q V N +   ++       + VL +
Sbjct: 16  VDSEVTVRGWIRTRRDSKAGISFLAVYDGSCFNPLQAVVNNNLPNYQ-------DEVLHL 68

Query: 74  DGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFL 131
                     T+ A++  GQ  EL A KI ++ + E+    P+  +R    SI +     
Sbjct: 69  TTGCSVEVTGTVVASLGQGQNFELQATKIVVIGLVEDPDTYPMAAKRH---SIEYLREVA 125

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQG 189
            LR R  L   + +    +     R   EN +   STP++TA+  EGA +    S ++  
Sbjct: 126 HLRPRTNLIGAVARMRHTLAQALHRFFHENGYFWVSTPLITAADTEGAGEMFRVSTLDLQ 185

Query: 190 SFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPG 232
           +     +    + Q        L  SG            + +   P FR E+  + R   
Sbjct: 186 NLPLTDKGEVDFNQDFFGREAFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNTSRHLA 245

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           EF+ L+ E++F   +D     EN+L+ VF+
Sbjct: 246 EFWMLEPEIAFANLNDAATLAENMLKYVFK 275


>gi|167586750|ref|ZP_02379138.1| lysyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 508

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 132/315 (41%), Gaps = 44/315 (13%)

Query: 6   THSCGDLGV----SDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL      SD  +       V ++G +   R  G   F  ++D  G  Q    P+
Sbjct: 43  THHAADLQAKFADSDKAALEANPVEVAVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPN 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + + +W L   G +++        N   G++ +  +++ +LS A   PLP  
Sbjct: 103 DVGAETYDAFK-KWDL---GDIVAARGVLFRTN--KGELSVQCKELRLLSKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                 + +R++ R++DL      RDT       RT+ I S+R  M   +F+E  TP+L 
Sbjct: 156 FHGLADQEMRYRQRYVDLIVTPETRDTFRA----RTKTIASIRKFMDTADFMEVETPMLH 211

Query: 171 ASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPR 226
              P GA  + F+          + L  AP+ Y + L+  GF+R F+I   FR+E   PR
Sbjct: 212 -PIPGGAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPR 269

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRI 277
            +    EF  ++   ++ +   +++  E ++R    +     T+         +  F R+
Sbjct: 270 HN---PEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFHRL 326

Query: 278 CYDDAIRRYGTDKPD 292
               AI++Y     D
Sbjct: 327 TITQAIQKYAPQYTD 341



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFMTGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|50913862|ref|YP_059834.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|50902936|gb|AAT86651.1| Lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 501

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    DS     +EI K       + ++G VM 
Sbjct: 69  VAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDSVSEDNYEIFKKADLGDFIGVEGEVMR 128

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A K+  LS +   PLP  F      E+I ++ R LDL   R+
Sbjct: 129 TD---------MGELSIKATKLTHLSKSLR-PLPEKFHGLTDIETI-YRKRHLDLISNRE 177

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R+++I+ +R  +   +F+E  TP+L   +   A    V     Q     L  
Sbjct: 178 SFDR-FVTRSKMISEIRRYLDGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRI 236

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI+N  E +
Sbjct: 237 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADYLDIMNLTEGI 295

Query: 257 LR 258
           ++
Sbjct: 296 IQ 297



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 435 LSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVL 494

Query: 561 LFP 563
           LFP
Sbjct: 495 LFP 497


>gi|296164539|ref|ZP_06847110.1| lysine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295900139|gb|EFG79574.1| lysine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 1087

 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 23/227 (10%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D    V +SG + R+R +GG++F  +RD  G  QV+   +++  E +++ 
Sbjct: 633 SHTVAGALDADDQEAVSVSGRILRIRDYGGVLFAQLRDWSGELQVLL--ENSRLEHSRTA 690

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-------LPLPVFGER 118
                + +  LV            +TG +  S      L V +         PLP   + 
Sbjct: 691 DFTAAIDLGDLVE-----------MTGHMGFSKNGTRSLIVRDWRMIGKCLRPLPNKWKG 739

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                 R + R++DL  +   + +V  R+ ++ S+R  + A+ FIE  TPIL        
Sbjct: 740 LTDPEARVRTRYVDLAVNPESRELVTARSSVLRSVRETLFAKGFIEVETPILQQIHGGAT 799

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           AR F+          + L  AP+ Y + L   G +R F++   FR+E
Sbjct: 800 ARPFVTHINTYDMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNE 845



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           R  + +  L A      + E+ E+      +A +
Sbjct: 995  AERWDLVAWGVELGTAYSELTDPVEQRRRLRKQSLLAAGGDPEAMELDED----FLQAME 1050

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1051 YAMPPTGGLGMGIDRLVMLITG-RSIRETLPFPLAK 1085


>gi|148244696|ref|YP_001219390.1| lysyl-tRNA synthetase, class II [Candidatus Vesicomyosocius
           okutanii HA]
 gi|259511539|sp|A5CWL4|SYK_VESOH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|146326523|dbj|BAF61666.1| lysyl-tRNA synthetase, class II [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 496

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 19/278 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F+ ++D  G  Q+    D            +W +      +  
Sbjct: 59  VSIAGRMMLKRVMGKVSFVHVQDSSGKIQLFVTCDKLPESFYNEQFKKWDIGDIIGAIGI 118

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +T       G++ +    I++L+ +   PLP        + IR++ R++DL  +   +
Sbjct: 119 LFKTN-----MGELSIRIDDIKLLTKSLR-PLPGKFHGLSDQEIRYRQRYVDLIMNKTSR 172

Query: 141 NIVKR-TRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  KR ++IIN +R      +FIE  TP+L T      A+ F           Y    +P
Sbjct: 173 NTFKRRSQIINYIRNFFNHHDFIEVETPMLQTIPGGATAKPFETYHNALDMPMY-FRISP 231

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  G ++ F+I   FR+E   +   P EF  ++   ++    D++N  E + R
Sbjct: 232 ELYLKRLIIGGMNKVFEINRNFRNEGLSTRHNP-EFTMIEFYQAYGTYHDLMNLTEKLFR 290

Query: 259 GVFEE-------FSNGNTVS--NNFLRICYDDAIRRYG 287
            +  +       +  GN +    +F RI   D+I +Y 
Sbjct: 291 SIALDVCGSANVYYQGNNLDFFKSFKRISVVDSILQYN 328



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 14/92 (15%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG---GLY------RAFQC 531
           +++L  +G EIA+G    + ++   + F      K+V E   G    +Y      RA + 
Sbjct: 403 RFELFISGCEIANGFSELNDAQDQAERFK-----KQVEEKDLGNDESMYYDADYIRALEY 457

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP  G   GIDR+VML   + ++R+V LFP
Sbjct: 458 GMPPTAGEGIGIDRLVMLFTDSPSIRDVILFP 489


>gi|161344750|ref|NP_442773.2| asparaginyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|20141643|sp|P52276|SYN_SYNY3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
          Length = 462

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 123/305 (40%), Gaps = 50/305 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLV 77
           V + GW+   R      F+++ D   +   QVV +   A ++ +   +++   L ++G +
Sbjct: 19  VMVQGWLRTKRTLKDFSFVEVNDGSSLANLQVVLDGSLADYDRLLSQLQTGAALVVEGKL 78

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                +        GQ +EL A K+E+L  A+    P+  +R   E +R     L  R +
Sbjct: 79  APSPGK--------GQRVELKATKLELLGGADPGSYPLQKKRHSFEFLR-TIGHLRPRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--------Q 188
           T+   +  R     ++        F+   TPI+TAS  EGA D    + ++        +
Sbjct: 130 TIGAVMRVRNACATAIHQFFQERGFLWVHTPIITASDCEGAGDLFKVTTLDLQRVPKNGE 189

Query: 189 GSFY--------ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           G  Y        A      Q +  +MA  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 190 GIDYSQDFFGKQAYLTVSGQLEAEVMALAFQNVYTFGPTFRAENSNTSRHLAEFWMVEPE 249

Query: 241 MSFVEQDDILNTMENVLRGVFE----------EF-----------SNGNTVSNNFLRICY 279
           M+F + +      E  L+ +F+          EF           +  N ++N F  + Y
Sbjct: 250 MAFCDLEGDRQWAEEFLKYIFKFVLEKCPEDMEFFDQRIDNTVLATADNIINNEFAWLTY 309

Query: 280 DDAIR 284
            +AI+
Sbjct: 310 SEAIK 314


>gi|296166663|ref|ZP_06849089.1| lysine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897998|gb|EFG77578.1| lysine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 503

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 9/184 (4%)

Query: 85  INANIIT---GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
           ++ N+I+   G++ + A   + L+     PLPV   +E  E  R + R++DL      + 
Sbjct: 121 VHGNVISSRRGELSVLADSWQ-LAAKSLRPLPV-AHKEMSEEARVRQRYVDLIVRPQART 178

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           + + R  ++ ++R  +    F+E  TP+L T +    AR F+  S       Y L  AP+
Sbjct: 179 VARQRIAVVRAIRNALERRGFLEVETPMLQTLAGGAAARPFVTHSNALDIDLY-LRIAPE 237

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + +  +  GFD+ F++   FR+E   S   P EF  L+   ++   DD       +++ 
Sbjct: 238 LFLKRCVVGGFDKVFEVNRVFRNEGADSTHSP-EFSMLETYQAYGTYDDSAVVTRELIQE 296

Query: 260 VFEE 263
           V +E
Sbjct: 297 VADE 300



 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPH 536
           ++DL   G E+A+G    +   V  + F+    +    ++    L      A + GMPP 
Sbjct: 411 KWDLYVRGIELATGYSELNDPVVQRERFAAQARAAAAGDDEAMVLDEDFLAALEYGMPPC 470

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            G   GIDR++M L G  ++RE  LFP+
Sbjct: 471 TGTGMGIDRLLMSLTGL-SIRETVLFPI 497


>gi|253997053|ref|YP_003049117.1| lysyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253983732|gb|ACT48590.1| lysyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 516

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/279 (21%), Positives = 127/279 (45%), Gaps = 18/279 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q+  + D+   E +++V   +     G +++ 
Sbjct: 76  VSIAGRMMLKRVMGKASFATVQDSTGRIQLFVSKDNFTDENSEAVYEAFKHWDLGDIIA- 134

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLH 139
            A+ +     TG++ +   ++ +L+ +   PLP        + ++++ R++DL   +   
Sbjct: 135 -AKGVLFKTKTGELSVKVSELRLLTKSLR-PLPEKFHGLQDQEVKYRQRYVDLMVSEETR 192

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
              + R+++++++R  M+   F+E  TP+L    P GA  + F+          Y +  A
Sbjct: 193 ATFMARSKVVSAIRSFMLENQFLEVETPMLH-PIPGGASAKPFITHHNALDMQMY-MRIA 250

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +   +++  E  +
Sbjct: 251 PELYLKRLVVGGFERVFEVNRNFRNEG-LSVRHNPEFTMMEFYAAYTDYLWLMDFTERCI 309

Query: 258 R---------GVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
           R          V +       +S  F R+    AI++Y 
Sbjct: 310 RAAAIAATGSAVLQYQGRELDLSKPFQRLTIVGAIQKYA 348



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV--VENRF--GGLYRAFQCGMPPH 536
           +++L   G EIA+G    + +E     F     +KE    E  +      RA + GMPP 
Sbjct: 424 RFELFVTGREIANGFSELNDAEDQAARFHAQMKAKEAGDAEAMYYDADFIRALEYGMPPT 483

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VM++  + ++R+V LFP
Sbjct: 484 GGCGIGIDRLVMMITDSPSIRDVILFP 510


>gi|171914137|ref|ZP_02929607.1| lysyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 487

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 8/85 (9%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFS---NVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           Y+LV NG EI+ G   + +++ ++Q        G   + V+  F     A + GMP  GG
Sbjct: 403 YELVINGQEISPG--YSELNDPIVQRERLEHQAGEETQKVDEEF---LLALEYGMPSAGG 457

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           I  GIDR+VM+L GA+++R+V LFP
Sbjct: 458 IGIGIDRLVMMLTGAESIRDVVLFP 482



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 20/254 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G V   R  G  +F D+ D  G  Q   N      E A  + +E V   D L +S 
Sbjct: 53  VKVAGRVTARRTMGKAVFFDLSDITGRIQCYVNKKEIGDE-AFELLTELVDIGDWLGVSG 111

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----RR 135
                     TG+  +  + ++++S A   PLP          I+++ R+LDL      R
Sbjct: 112 KTFVTK----TGEPSVHTETLQVMSKALR-PLPDKWHGVTDREIKYRQRYLDLISNERSR 166

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           DT     V+R+ ++  +R  +    F+E  TP++    P GA    F    +    + Y 
Sbjct: 167 DTF----VQRSLMVAEIRRFLQDRGFLEVETPMMQ-DVPGGAAATPFETFFKALNMAMY- 220

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ + + L+  GF + F++   FR+E   S R   EF  L+   +F + + + + +
Sbjct: 221 LRIAPELFLKRLLVGGFTKIFELNRNFRNEG-LSRRHNPEFTMLEAYWAFSDFEQMADLV 279

Query: 254 ENVLRGVFEEFSNG 267
           E+++  + E+F  G
Sbjct: 280 ESMVCHLAEKFCGG 293


>gi|323693201|ref|ZP_08107419.1| lysyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
 gi|323502684|gb|EGB18528.1| lysyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
          Length = 644

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 124/292 (42%), Gaps = 44/292 (15%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---VLCID 74
           G  V L+G +   R  G   F +I+D  G  Q     DS   E  K  +      V+ I 
Sbjct: 60  GKEVTLAGRMMSKRVMGKASFCNIQDLKGNIQSYVARDSIGEESYKEFKKMDIGDVVGIR 119

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G V             TG+I + A+ + +LS + ++ LP          +R++ R++DL 
Sbjct: 120 GTVFKTK---------TGEISIHAEAVTLLSKSLQI-LPEKFHGLTNTDMRYRQRYVDLI 169

Query: 134 ----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
                RDT     VKR+RII  +R  +    F+E  TP+L  ++   A      +R    
Sbjct: 170 MNPEVRDTF----VKRSRIIKEVRNFLDGRGFMEVETPMLVPNAGGAA------ARPFTT 219

Query: 190 SFYALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            + AL +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++
Sbjct: 220 HYNALDEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAY 278

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRRY 286
            +   ++  +E + R V ++               +   F RI   DA+++Y
Sbjct: 279 TDYYGMMELVETMFREVAKKVLGTAKLIYDGVEIDLEKPFERITMVDALKKY 330



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC--DLLMGSPSTVSVEQ 583
           A   GMPP GGI  G+DR +MLL  +  +R+V LFP  +     D+      TV  E+
Sbjct: 457 ALMVGMPPTGGIGIGMDRFIMLLTDSYAIRDVLLFPTMKTLGGNDVSKKEEKTVITEE 514


>gi|212223203|ref|YP_002306439.1| asparagine synthetase A [Thermococcus onnurineus NA1]
 gi|212008160|gb|ACJ15542.1| truncated asparaginyl-tRNA synthetase-related protein [Thermococcus
           onnurineus NA1]
          Length = 300

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 16/160 (10%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPE------GARDFLVPSRVN-QGSFYALPQA 197
           +TR+I+ M   M+++ F     P++ +S  +       A + L P  V   G    L  +
Sbjct: 18  QTRVIDYMTRYMVSKGF-RWMLPVMLSSITDPLWPDPAASEALKPPEVEVYGERLRLTHS 76

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDMEMSFVEQDDILNTMEN 255
              +KQ+ +A G +R F ++P  R E   +D  R   EF QLD E+++   DD+++ +E 
Sbjct: 77  MILHKQMAIAMGINRLFILSPNIRLEGRSADDGRHAYEFTQLDFEIAYASMDDVMSLIEE 136

Query: 256 VLRGVFEEFSNGN------TVSNNFLRICYDDAIRRYGTD 289
           ++ G+F+E  N         V+  F R   ++    +G++
Sbjct: 137 LISGLFKEARNWGLEREVPKVAPPFKRFTLEEIKAEFGSE 176



 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 13/88 (14%)

Query: 482 YDL-VCNGF-EIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPP 535
           YDL +  G+ E++SGG R    EV+++     GIS    K  +E    GL R       P
Sbjct: 211 YDLYLPEGYGEVSSGGEREWEYEVIVRKIKKAGISLDAFKPYLEVAKAGLLR-------P 263

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             G   GI+R++  L+GA+++ EV  FP
Sbjct: 264 SAGAGIGIERLIRYLVGAEHIAEVQPFP 291


>gi|187927988|ref|YP_001898475.1| lysyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|238691787|sp|B2U8U9|SYK_RALPJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|187724878|gb|ACD26043.1| lysyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 514

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY 526
           +G+D L     +++L   G EIA+G    +  E   + F      K+  +     +   Y
Sbjct: 411 RGSDTLPGITERFELFITGREIANGFSELNDPEDQAERFRKQVEQKDAGDEEAMFYDADY 470

Query: 527 -RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GMPP GG   GIDR+VMLL  + N+R+V LFP
Sbjct: 471 IRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVILFP 508



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 63/288 (21%), Positives = 125/288 (43%), Gaps = 30/288 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D     Q   + D+   ++  S + +W L   G +++ 
Sbjct: 74  VAIAGRMMLKRVMGKASFATVQDATDRIQFYISRDAVGEDVYASFK-KWDL---GDIVAA 129

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-----R 134
               +     TG++ ++  ++ +LS +   LP   +G  +  +  +++ R++DL      
Sbjct: 130 RGTLMKTK--TGELSVAVTELRLLSKSLRPLPGDYYGLAD--QEQKYRQRYVDLIVSKET 185

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           RDT       RT+ + S+R  M    F+E  TP+L        A+ F+          + 
Sbjct: 186 RDTFRA----RTKAMASLRNFMAGNGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMF- 240

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R ++I   FR+E   S R   EF  ++   ++ +   +++  
Sbjct: 241 LRIAPELYLKRLIVGGFERVYEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDFT 299

Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDKPD 292
           E ++R    + S   T++           F R+    AI++Y     D
Sbjct: 300 EQLIRQAAIDASGTATLTYQGRELDLAKPFHRLTICQAIQKYAPQYTD 347


>gi|216263861|ref|ZP_03435855.1| asparaginyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215979905|gb|EEC20727.1| asparaginyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 462

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 108/262 (41%), Gaps = 28/262 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA--KSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F+    K++ +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFDEKDLKNLTTGASIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++  A+    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTCGFNVIGEADPKTYPLQKKRHTFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----- 187
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAVARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKPN 185

Query: 188 --------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NDLGNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLR 258
           ++ EM+F + +D +   E++L+
Sbjct: 246 IEPEMAFYKLNDNITLAEDLLK 267


>gi|251770987|gb|EES51571.1| lysyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 508

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 126/296 (42%), Gaps = 28/296 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           R RT +     + D     R++G +  +R  G   F  ++D     Q+ A  D+   + A
Sbjct: 51  RERTAALTPETLPDPAPQARIAGRIVLMRKFGKAFFATLQDEGERFQIYAKADALGDDYA 110

Query: 63  KSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 W   +D G ++    E       TG+  L A  + +LS +   PLP        
Sbjct: 111 T-----WAELLDLGDIVG--VEGTFFFTKTGEPTLQATSLTLLSKSIR-PLPDKWHGLSD 162

Query: 122 ESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--A 177
              R++ R++DL    DT H+  V R+ I+  +R  M  E FIE  TP++   +P G  A
Sbjct: 163 TEARYRQRYVDLIVTPDT-HRVFVTRSLIVRFIRRFMDGEGFIEVETPMM-QPTPGGALA 220

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R F           + L  AP+ Y + L+  G  R ++I   FR+E   S R   EF  +
Sbjct: 221 RPFSTHHNALDLELF-LRIAPELYLKRLIVGGMTRVYEINRNFRNEG-VSTRHNPEFTMM 278

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNT----------VSNNFLRICYDDAI 283
           +   ++   +++++  E +L  +     +G T          ++  F RI Y D+I
Sbjct: 279 EFYAAYASYEELMDLTERLLSDLARHI-HGTTRLPFGDWEIDLTPPFRRISYLDSI 333



 Score = 45.4 bits (106), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + G+PP  G   GIDR+VMLL    ++R+V LFP+
Sbjct: 466 RALEYGLPPTAGEGIGIDRLVMLLTNQTSIRDVLLFPL 503


>gi|221632875|ref|YP_002522097.1| lysyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156597|gb|ACM05724.1| lysyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 529

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 128/297 (43%), Gaps = 38/297 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQV------VANPDSACFEIAKSVRSEWVLCID 74
           V L+G V  VR  G  +F  IRD  G  Q+      V +   A F+    + +++V    
Sbjct: 58  VTLAGRVVSVRDMGRTVFSHIRDGSGAIQLFLRREFVGDDQLAWFKRYVDL-NDFVEADG 116

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            L  +R          TG++ L    + +LS A   P   +      E+ R++ R++DL 
Sbjct: 117 HLFRTR----------TGEVSLEVHALRLLSKALNPPPDKWHGLTDVET-RYRQRYVDLM 165

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +   + I V R R+I ++R  +    F+E  TP L        AR F         +FY
Sbjct: 166 ANPDTRQIFVTRARVIRAIRQYLDERGFLEVETPTLQPIYGGAAARPFTTYYHALDQTFY 225

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  + + Y + L+  G++R ++I   FR+E   +   P EF  L+   ++ +  DI+  
Sbjct: 226 -LRISDELYLKRLLVGGYERVYEICKDFRNEGIDARHNP-EFTMLEFYAAYADYHDIMQM 283

Query: 253 MENVLRGVFEE------FSNGNTV---SNNFLRICYDDAIRRYG-------TDKPDL 293
            E ++     E      F  G+TV   +  + R+   +A+ R+        TD+P L
Sbjct: 284 CEELIVFAAREALGTLTFQWGDTVIDLTPPWARMSLREALLRFTGIDFLEVTDQPTL 340



 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP GG   GIDR+VML      +REV LFP
Sbjct: 453 ALMYGMPPTGGFGLGIDRLVMLFTNRPTIREVILFP 488


>gi|299066994|emb|CBJ38189.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum CMR15]
          Length = 510

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY 526
           +G+D L     +++L   G EIA+G    +  E   + F      K+  +     +   Y
Sbjct: 407 RGSDTLPGITERFELFITGREIANGFSELNDPEDQAERFRKQVEQKDAGDEEAMFYDADY 466

Query: 527 -RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GMPP GG   GIDR+VMLL  + N+R+V LFP
Sbjct: 467 IRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVILFP 504



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 110/241 (45%), Gaps = 13/241 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L+G +   R  G   F  ++D  G  Q     D    ++  + +  W L   G +++ 
Sbjct: 70  VALAGRMMLKRVMGKASFATVQDGSGQIQFYITRDRVGEDLYAAFK-HWDL---GDIIAA 125

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N   G++ +  Q++ +LS +   PLP        + ++++ R++DL      +
Sbjct: 126 RGVLFRTN--KGELSVQVQELRLLSKSLR-PLPDKFHGLADQEMKYRQRYVDLIVSPETR 182

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  + RT+ I S+R  M    F+E  TP+L    P GA  + F+          + L  A
Sbjct: 183 NTFRARTKAIASLRRHMSDAGFMEVETPMLH-PIPGGATAKPFITHHNALDMQMF-LRIA 240

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R ++I   FR+E   S R   EF  ++   ++ +   +++  EN++
Sbjct: 241 PELYLKRLIVGGFERVYEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDYTENLI 299

Query: 258 R 258
           R
Sbjct: 300 R 300


>gi|241662570|ref|YP_002980930.1| lysyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|309781153|ref|ZP_07675890.1| lysine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|240864597|gb|ACS62258.1| lysyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|308919974|gb|EFP65634.1| lysine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 514

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY 526
           +G+D L     +++L   G EIA+G    +  E   + F      K+  +     +   Y
Sbjct: 411 RGSDTLPGITERFELFITGREIANGFSELNDPEDQAERFRKQVEQKDAGDEEAMFYDADY 470

Query: 527 -RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GMPP GG   GIDR+VMLL  + N+R+V LFP
Sbjct: 471 IRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVILFP 508



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 63/288 (21%), Positives = 125/288 (43%), Gaps = 30/288 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D     Q   + D+   ++  S + +W L   G +++ 
Sbjct: 74  VAIAGRMMLKRVMGKASFATVQDSTDRIQFYISRDAVGEDVYASFK-KWDL---GDIVAA 129

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-----R 134
               +     TG++ ++  ++ +LS +   LP   +G  +  +  +++ R++DL      
Sbjct: 130 RGTLMKTK--TGELSVAVTELRLLSKSLRPLPGDYYGLAD--QEQKYRQRYVDLIVSKET 185

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           RDT       RT+ + S+R  M    F+E  TP+L        A+ F+          + 
Sbjct: 186 RDTFRA----RTKAMASLRNFMAGNGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMF- 240

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R ++I   FR+E   S R   EF  ++   ++ +   +++  
Sbjct: 241 LRIAPELYLKRLIVGGFERVYEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDFT 299

Query: 254 ENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDKPD 292
           E ++R    + S   T++           F R+    AI++Y     D
Sbjct: 300 EQLIRQAAIDASGTATLTYQGRELDLAKPFHRLTICQAIQKYAPQYTD 347


>gi|19745706|ref|NP_606842.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|139474193|ref|YP_001128909.1| lysyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|39932219|sp|Q8P1X6|SYK_STRP8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|73919758|sp|Q5XD62|SYK_STRP6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166230592|sp|A2RFR7|SYK_STRPG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|19747842|gb|AAL97341.1| putative lysyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|134272440|emb|CAM30696.1| lysyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 497

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    DS     +EI K       + ++G VM 
Sbjct: 65  VAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDSVSEDNYEIFKKADLGDFIGVEGEVMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A K+  LS +   PLP  F      E+I ++ R LDL   R+
Sbjct: 125 TD---------MGELSIKATKLTHLSKSLR-PLPEKFHGLTDIETI-YRKRHLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R+++I+ +R  +   +F+E  TP+L   +   A    V     Q     L  
Sbjct: 174 SFDR-FVTRSKMISEIRRYLDGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI+N  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADYLDIMNLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|297820926|ref|XP_002878346.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297324184|gb|EFH54605.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 540

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 2/151 (1%)

Query: 122 ESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           + IR++ R+LDL   D + +  + +T+II  +R  +   +F+E  TP+++  +   A   
Sbjct: 171 QEIRYRQRYLDLMLNDEVCQIFMTKTKIIKYIRRYLDDLDFLEVETPMMSMIAGGAAARR 230

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 +      +   P+ Y + L+  GF+R ++I   FR+E       P EF   +  
Sbjct: 231 FATHHNDMNMKMFMRITPELYLKQLVVGGFERVYEIGKQFRNEGIDLTHNP-EFTTCEFY 289

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           M+F + +D++   E +L G+ +E + G  + 
Sbjct: 290 MAFADYNDLMEMSEKLLSGMVKELTGGYKIK 320



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+VMLL  ++N++EV LFP
Sbjct: 480 ALEYGLPPTGGWGMGIDRLVMLLTDSQNIKEVLLFP 515


>gi|28198321|ref|NP_778635.1| lysyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182680960|ref|YP_001829120.1| lysyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130167|sp|Q87EB3|SYK_XYLFT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238691085|sp|B2I848|SYK_XYLF2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|28056391|gb|AAO28284.1| lysyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182631070|gb|ACB91846.1| lysyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307579428|gb|ADN63397.1| lysyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 506

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 23/278 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ------VVANPDSACFEIAKSVRSEWVLCID 74
           VR++G +   R  G   F  I+D  G  Q      V+     A F++      + +    
Sbjct: 70  VRMAGRLMAKRLMGKASFAQIQDESGRIQLLIQSNVLGEDSYAAFKVLDV--GDIIAVEG 127

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           GL  +R          TG++ +    + +L+ A   PLP           R++ R++DL 
Sbjct: 128 GLTRTR----------TGELSVKVNVLRLLTKALR-PLPDKWHGLTDVEQRYRQRYVDLI 176

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
                + I +KR++II ++R  + A  F+E  TP++        A+ F+          Y
Sbjct: 177 VTPESREIFIKRSKIIRALRTWLDARLFLEVETPMMHYIPGGAAAKPFVTYHNALDLELY 236

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  G +R ++I   FR+E   +   P EF  L++  ++    ++++ 
Sbjct: 237 -LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRHNP-EFTMLELYEAYSTYHEVMDL 294

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
            E ++R   +       V  +  +I      RR+  D+
Sbjct: 295 AETMIRDTAQSVLGTTQVIWDGAQIDLGPIFRRWRMDE 332



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY 526
           + +D+ S    +++L  NG EIA+G    +  E     F     +KE  ++    +   Y
Sbjct: 403 RESDIESGYTDRFELFINGKEIANGFSELNDPEEQAMRFQKQVEAKEGGDDEAMYYDADY 462

Query: 527 -RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  G+DR+VMLL G+ ++R+V LFP
Sbjct: 463 IRALEYGMAPTGGLGIGVDRLVMLLTGSTSIRDVLLFP 500


>gi|328716488|ref|XP_003245957.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like isoform 2
           [Acyrthosiphon pisum]
          Length = 520

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 28/269 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK---SVRSEWVLCIDGL 76
           V + G +H     G   F+ +R      QV+A   D+   +  K   ++  E V+ I G 
Sbjct: 79  VWIRGRLHTSYARGKQCFMIVRQQQWSIQVLAVVSDTISKQFVKFCSNITKESVVDIKGK 138

Query: 77  VMSRSAETINANIITGQIELSAQKIEILS-VAEELPL-------PVFGEREYPE-----S 123
           V +R+   I  +     +EL  +++ ++S  A++LPL       PV G+ +  +      
Sbjct: 139 V-ARTPSKI-GSCSQKDVELYIEELWVVSQSADQLPLLLEDAYRPVNGDDKDADIRANLD 196

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFLV 182
            +   R +DLR             +    R  + A+ F+E   P I  A +  G   F +
Sbjct: 197 TKLDNRAIDLRTPANQAIFRLEAVVCKFFREILTAKGFVEIFPPRIKNAVTGNGTNVFKI 256

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                +GS Y L Q P  +  + +A  F+R F I P FR ED  S R   EF  L++EM+
Sbjct: 257 S--YFKGSAY-LAQCPTFHNIIAIAGDFERVFTIGPVFRPEDSNSHRHLTEFTNLNLEMT 313

Query: 243 FVEQ-----DDILNTMENVLRGVFEEFSN 266
           F        D I +   ++ +G+ E + +
Sbjct: 314 FKHHYHEVVDVIASLFTSIFKGLRENYQS 342



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G E+ +GG R H    +++   +  +  E    +F     AF+ G PP  G   
Sbjct: 435 YDMFMRGEEVLTGGQRIHDYHYLMKRAKHCQVDIE----KFAYYLDAFRYGCPPLAGGGI 490

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R  S+FP
Sbjct: 491 GLERVVMLYLGLDNIRIASMFP 512


>gi|188995082|ref|YP_001929334.1| asparaginyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|259511570|sp|B2RK42|SYN_PORG3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|188594762|dbj|BAG33737.1| asparaginyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 469

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 108/274 (39%), Gaps = 29/274 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L    VG  + + GWV   R +  + F+ + D   I  +    D A F+ A+ 
Sbjct: 7   RTRIADALHGGLVGQEINIKGWVRTKRGNKAVNFIALNDGSTIHNMQIVADLASFDAAQM 66

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPES 123
            +     CI   V+    E+  A    GQ +E+ A  IEI   A+    P+   ++   +
Sbjct: 67  SQITTGACIG--VIGTLVESQGA----GQSVEVQASAIEIYGTADPATYPL---QKKGHT 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL 181
           + F      LR  T    ++ R R   ++       N  +     P++TAS  EGA    
Sbjct: 118 LEFLREIAHLRPRTNTFGVIYRIRHHMAIAIHTFFHNKGYYYFHAPLITASDCEGAGQMF 177

Query: 182 VPSRVNQGSFYALPQAPQQYK--------------QL---LMASGFDRYFQIAPCFRDED 224
             + +N  S     +    Y+              QL   + A      +   P FR E+
Sbjct: 178 QVTTLNPDSLPRTEEGQVDYRKDFFGRHTSLTVSGQLEGEMAAMALGGIYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             + R   EF+ ++ E++F+E +D ++  E  ++
Sbjct: 238 SNTPRHLAEFWMIEPEVAFLEIEDNMDLAEEFIK 271


>gi|289669570|ref|ZP_06490645.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 464

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 106/270 (39%), Gaps = 40/270 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D   +   QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEVKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           +++    +        GQ  E+ A  +EI+   E+ L  P+   +  P S  F      L
Sbjct: 77  VLVKSQGK--------GQSFEIQASGVEIVGWVEDPLTYPI---QPKPMSPEFLREVAHL 125

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R R  L   + +    +     R   +N F   STPI+T S  EGA       RV+    
Sbjct: 126 RPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMF---RVSTLDM 182

Query: 192 YALPQAPQ----------QYKQLLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
             LP+               +  L  SG            + +   P FR E+  + R  
Sbjct: 183 VNLPRDGSGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHL 242

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            EF+ ++ E++F +  +     E  L+ +F
Sbjct: 243 AEFWMIEPEIAFADLAEDARLAEQFLKYLF 272


>gi|3582260|gb|AAC35210.1| lysyl-tRNA synthetase [Sinorhizobium meliloti]
          Length = 498

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 12/98 (12%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++  CNG+EI +           R  M E M QA +     K + E+       A   G
Sbjct: 405 RFETYCNGWEIGNAFSELNDPVEQRARMVEQMEQAHARGEKEKTLDED----FLDAMDQG 460

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR++MLL  + ++R++ LFP  +   D
Sbjct: 461 MPPAGGLGIGVDRLIMLLTNSPSIRDIILFPARRQKAD 498



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 115/246 (46%), Gaps = 14/246 (5%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           ++ G  V ++G V   R  G  +F+D+ D  G  Q+ ++ D+A  E     R+   +   
Sbjct: 57  TESGETVTVAGRVFSSRNSG--MFMDLHDASGKIQIFSHKDTAPEE----ARALLPMIDL 110

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++  + E        G++ ++A++I +L  +  LP+P           R++ R+LD+ 
Sbjct: 111 GDIIGVTGEVRRTK--RGELTVNAKEITMLCKSL-LPMPEKYHGLADIETRYRKRYLDIM 167

Query: 135 RDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +   K    +R+RI++S+R  +  E F+E  TP+L        A  F       +   Y
Sbjct: 168 VNEESKLRFQQRSRIVSSLRRFLEDEGFMEVETPMLQPIYGGATAEPFKTHHNTLKLDMY 227

Query: 193 ALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
            L  A + Y   ++ SG  D+ F+I   FR+E   +   P EF  ++   ++ + +D++ 
Sbjct: 228 -LRIAAELYLNAILVSGLTDKVFEINRNFRNEGVSTRHNP-EFTMMECYWAYADYEDVMG 285

Query: 252 TMENVL 257
            +E + 
Sbjct: 286 LVERMF 291


>gi|28896347|ref|NP_802697.1| lysyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|28811598|dbj|BAC64530.1| putative lysyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 501

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    DS     +EI K       + ++G VM 
Sbjct: 69  VAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKKADLGDFIGVEGEVMR 128

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A K+  LS +   PLP  F      E+I ++ R LDL   R+
Sbjct: 129 TD---------MGELSIKATKLTHLSKSLR-PLPEKFHGLTDIETI-YRKRHLDLISNRE 177

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R+++I+ +R  +   +F+E  TP+L   +   A    V     Q     L  
Sbjct: 178 SFDR-FVTRSKMISEIRRYLDGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRI 236

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI+N  E +
Sbjct: 237 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADYLDIMNLTEGI 295

Query: 257 LR 258
           ++
Sbjct: 296 IQ 297



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 435 LSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVL 494

Query: 561 LFP 563
           LFP
Sbjct: 495 LFP 497


>gi|328768004|gb|EGF78052.1| hypothetical protein BATDEDRAFT_91161 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 503

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 128/327 (39%), Gaps = 81/327 (24%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V + GWV   R    + F+D+ D                    S+ S   + +D  
Sbjct: 33  IGKTVTVHGWVRSQRLQKTVTFIDLDD-------------------GSLLSGLQIVMDSS 73

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V +++  T  +  I+G++  S  K + + + E + L V GE + P+S       L L   
Sbjct: 74  V-AKTLTTGTSVKISGKLVPSPSKNQAVDL-EAIDLTVLGECD-PQSYAISKNRLPLEHL 130

Query: 137 TLHKNIVKRTRIINSM-RCRMIA----------ENFIECSTPILTASSPEGA-------R 178
             ++++  RTRI  ++ R R  A          + F + + PILT    EG         
Sbjct: 131 REYQHLRSRTRIFGALWRIRSAALQGIHDFFKAQEFTQVNMPILTTHDCEGGGEAFRVLT 190

Query: 179 DFLVPSRVNQGSFY-------ALP------------QAPQQYKQLLMASGFDRYFQIAPC 219
           D  + S  N    Y       ALP                Q     MAS   R + + P 
Sbjct: 191 DDTLKSYQNYAVNYSQTTQHQALPLPDEFFGKPVYTTVSAQLHLEFMASALSRVYVLGPA 250

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVE---------QDDILNTMENVLR------GVFEEF 264
           FR E  +S R   EF+ L+ E  F+          + +I + +++VL        +F++F
Sbjct: 251 FRAEKSQSTRHLAEFWMLEAEACFIPTISALTDLIEGNIKHVIQHVLNTCQEDLALFDQF 310

Query: 265 SNG------NTVSNN-FLRICYDDAIR 284
           S        + VSN  F R+ Y DA++
Sbjct: 311 SERDLVQKLDNVSNKLFERMTYTDAVQ 337



 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 35/144 (24%)

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM----------ESLKGNDLLSIKAFQYDLV 485
           ++ D+P        KKI     PF M Q G+          E++   DLL  K       
Sbjct: 383 FVTDYP--------KKI----KPFYMKQSGIGNTSVTKCDGETVACTDLLLPKVG----- 425

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
               E+A G +R    E++ Q  ++ G+    +E       R +  G  PHGG   G +R
Sbjct: 426 ----ELAGGSLREDQYELLAQKINDAGLDSAQLEWYLD--LRKY--GSVPHGGYGMGFER 477

Query: 546 IVMLLLGAKNVREVSLFPMSQNFC 569
           ++  L G  N+R++   P S   C
Sbjct: 478 LLGYLTGMTNIRDMIPAPRSYGHC 501


>gi|289447250|ref|ZP_06436994.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis CPHL_A]
 gi|289420208|gb|EFD17409.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis CPHL_A]
          Length = 1172

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 23/230 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSAC- 58
           R  +H+      +D  + V +SG + R+R +GG +F  +RD  G  QV+   +  D  C 
Sbjct: 708 RPPSHTVAQALAADHQASVSVSGRIMRIRNYGGALFAQLRDWSGEMQVLLDNSRLDQGCA 767

Query: 59  --FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  A  +       ++      +++T   ++I     L  + +         PLP   
Sbjct: 768 ADFNAATDLGD----LVEMTGHMGASKTGTPSLIVSGWRLIGKCLR--------PLPNKW 815

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL      
Sbjct: 816 KGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGG 875

Query: 175 EGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AR F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 876 ATARPFV--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 923



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 41/214 (19%)

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCF----FIAGDPLKFCSFAADARNHI 420
            E  +++G+ PV + ++   +EA+  R+D   G +      + AG P +    A      +
Sbjct: 986  EPVDISGIWPV-RTVHDAISEALGERIDADTGLTTLRKLCYAAGVPYRTQWDAGAVVLEL 1044

Query: 421  AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             + L  + C   +  + +DFP             + +P T P     S +G       A 
Sbjct: 1045 YEHL--VECRTEQPTFYIDFPT------------SVSPLTRPH---RSKRG------VAE 1081

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  + E  L A      + E+ E+      +A +  
Sbjct: 1082 RWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAMEYA 1137

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            MPP GG+  GIDR+VML+ G +++RE   FP+++
Sbjct: 1138 MPPTGGLGMGIDRVVMLITG-RSIRETLPFPLAK 1170


>gi|255690547|ref|ZP_05414222.1| asparagine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260624004|gb|EEX46875.1| asparagine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 467

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 113/276 (40%), Gaps = 34/276 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L  +D+G+ V + GWV   R    + F+ + D   I  +    D A F  E+ 
Sbjct: 6   RTKIVDLLKRTDIGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNLQVVVDLANFDEEML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121
           K + +       G  +S + E + +     ++E+ A++IE+L   +   PL   G     
Sbjct: 66  KQITT-------GACISVNGEMVESVGSGQKVEVQAREIEVLGTCDNTYPLQKKGH---- 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARD 179
            S+ F      LR  T     V R R  +  ++      + F    TPI+TAS  EGA  
Sbjct: 115 -SMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQ 173

Query: 180 FLVPSRVN--------QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRD 222
               + +N        +GS      F+    +     QL   L A+     +   P FR 
Sbjct: 174 MFQVTTMNLYDLKKNEEGSIIYDDDFFGKQASLTVSGQLEGELAATALGSIYTFGPTFRA 233

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           E+  + R   EF+ ++ E++F +  D ++  E  ++
Sbjct: 234 ENSNTPRHLAEFWMIEPEVAFNDITDNMDLAEEFIK 269


>gi|292492473|ref|YP_003527912.1| lysyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291581068|gb|ADE15525.1| lysyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 500

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 128/300 (42%), Gaps = 24/300 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  I+D  G  Q+    D    E  +  +   +  I G     
Sbjct: 59  VKVAGRMMTRRIMGKASFAHIQDMSGRIQLYIRRDQLPEEGYREFKRWDIGDIVG----- 113

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
            AE +     +G++ +    + +L+ +   PLP        +  R++ R+LDL   +   
Sbjct: 114 -AEGVLMKTNSGELSVRVDGLRLLTKSLR-PLPEKFHGLADQETRYRQRYLDLIMNEVTR 171

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +   +R+ II+ +R  +  + F+E  TP++ A  P GA  R F+          + L  A
Sbjct: 172 ETFRRRSYIIDRIRRYLGDKGFLEVETPMMQAI-PGGAVARPFITYHNTLDMELF-LRIA 229

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF++ F+I   FR+E   +   P EF  L+   ++   +D+++  E ++
Sbjct: 230 PELYLKRLVVGGFEKVFEINRNFRNEGLSARHNP-EFTMLEFYQAYATYEDLMDLTEAMM 288

Query: 258 R-------GVFEEFSNGNTVS--NNFLRICYDDAIRRYGTD--KPDLRNPIIMHNVTEHF 306
           R       G  E    G T    + F R+   ++I  +  D    DL        V EH 
Sbjct: 289 RDLAQTVLGSTEITYQGETYDFGSPFTRMSLKESILSFNPDIFPADLETLPAARRVAEHL 348



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY 526
           + N+   + A +++    G+EIA+G    + +E   + F      +E  +     F   Y
Sbjct: 392 RRNETDPLVADRFEFFVGGWEIANGFSELNDAEDQAERFRAQLQDREAGDQEAMHFDMDY 451

Query: 527 -RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +A + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 452 IQALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVLLFP 489


>gi|281425305|ref|ZP_06256218.1| hypothetical protein HMPREF0971_02277 [Prevotella oris F0302]
 gi|299141503|ref|ZP_07034639.1| lysine--tRNA ligase [Prevotella oris C735]
 gi|281400598|gb|EFB31429.1| lysine--tRNA ligase [Prevotella oris F0302]
 gi|298576839|gb|EFI48709.1| lysine--tRNA ligase [Prevotella oris C735]
          Length = 579

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 123/272 (45%), Gaps = 32/272 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---------VL 71
           V ++G +   R  G   F +++D  G  QV  + D  C +  K + ++          ++
Sbjct: 55  VVIAGRMMSRRIMGKASFAELQDSKGRIQVYISRDDICPDENKDLYNKVFKKLLDIGDII 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            + G V             TG+I + A++I +LS + + PLP+        + + + PE 
Sbjct: 115 GVKGFVFRTQ---------TGEISVHAKEITLLSKSLK-PLPIVKYKDGVAYDKFDDPE- 163

Query: 124 IRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           +R + R++DL   D + +  +KR  I+ +MR       + E  TP L + +    AR F+
Sbjct: 164 LRARQRYVDLIVNDGVKETFLKRATILRTMRNFFDEHGYTEVETPTLQSIAGGASARPFI 223

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ +
Sbjct: 224 THFNALNIDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKFHNP-EFTCMELYV 281

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
            + + + +++  E +L  + +  +NG+T   N
Sbjct: 282 QYKDYNWMMSFTEQLLETICKAVNNGSTEVKN 313



 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 5/63 (7%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           RA Q GM P  GI  GIDR+ ML+ G + ++EV LFP  +    +    P + S+++  E
Sbjct: 463 RALQYGMAPTSGIGIGIDRLCMLMTGKEFIQEVLLFPQMKPEAKM----PQS-SIKEWAE 517

Query: 587 LGL 589
           LG+
Sbjct: 518 LGV 520


>gi|224143682|ref|XP_002325039.1| predicted protein [Populus trichocarpa]
 gi|222866473|gb|EEF03604.1| predicted protein [Populus trichocarpa]
          Length = 549

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 75/152 (49%), Gaps = 4/152 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R+LDL  +   + I K R++II  ++  +   +F+E  TP++   +    AR 
Sbjct: 198 QETRYRQRYLDLMLNLEVQQIFKTRSKIIKYVKSFLDNLDFLEVETPMMNMIAGGAAARP 257

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  AP+ + + L+  G DR ++I   FR+E       P EF   + 
Sbjct: 258 FVTHHNDLNMKLY-MRIAPELFLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTTCEF 315

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
            M++ + +D++   E +L G+ +E + G  + 
Sbjct: 316 YMAYADYNDLMELTEKMLSGMVKELTGGYKIK 347



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ MLL  ++N++EV LFP
Sbjct: 509 ALEYGLPPTGGWGMGIDRLAMLLTDSQNIKEVLLFP 544


>gi|242802788|ref|XP_002484043.1| lysyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218717388|gb|EED16809.1| lysyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 510

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 35/240 (14%)

Query: 91  TGQIELSAQKIEILSVA----EELPLPV--FGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
           TG+ EL+ Q  E+ ++      ++P      G   YP  ++F         D    +I++
Sbjct: 133 TGRGELTVQVTELPTLLSPSLHDIPTDTKEHGVSGYPRHVQFLA-------DKHTSDIMR 185

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYK 202
            R+ II  +R   +   F+E +TPI+ + +    AR F+  +         L  AP+ + 
Sbjct: 186 IRSAIIQYIRQFFVERTFMEVNTPIMASEAGGATARPFVTTANEFPDKSLYLRIAPELWL 245

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + L+  GFD+ F+I P FR+E       P EF   +  M +   +D+++  EN+  G+ E
Sbjct: 246 KRLVIGGFDKVFEIGPSFRNEGIDKSHNP-EFTTCEFYMVYANLEDVISITENLFSGLAE 304

Query: 263 EFSNGN--------TVSNN----FLRICY----DDAIRRYGTDKPDLRNPIIMHNVTEHF 306
             S           T S N    F RI +    + AI R     PDL +P    +V + F
Sbjct: 305 HVSQQKERMSSEIPTPSTNFSIPFRRIDFISGIEAAINR---PLPDLSSPSAEQDVKKLF 361


>gi|119511071|ref|ZP_01630191.1| lysyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119464322|gb|EAW45239.1| lysyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 467

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 121/266 (45%), Gaps = 28/266 (10%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIIN 150
           G++ +  ++  IL+ +  LPLP         + R++ R++DL  +  + +   +R +I  
Sbjct: 34  GELSVYVKEYSILTKSL-LPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRRRAQITA 92

Query: 151 SMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
            +R  +   +F+E  TP+L + +    AR F+          Y L  A + + + L+  G
Sbjct: 93  GIRRYLTERDFLEIETPVLQSEAGGADARPFVTYHNTLDMQLY-LRIATELHLKRLIVGG 151

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
           F++ F++   FR+E   +   P EF  +++  ++ +  D++   E ++  V +E      
Sbjct: 152 FEKVFELGRIFRNEGVSTRHNP-EFTSIEVYQAYADYHDMMALTEGIITTVAQEVLGT-- 208

Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEHFVHSEFRVFS-----KILSVN 321
                L+I Y       GT   DL  P   + MH++ + +   +F  FS     K  S N
Sbjct: 209 -----LQITYQ------GT-PIDLSAPWRRVTMHDLVKEYTGLDFNSFSTLEEAKAASKN 256

Query: 322 PG-YEVWAIPAKGGGGNRAFCDRMNE 346
            G + +  +P+ G   N AF  ++ E
Sbjct: 257 AGLHGIEDVPSMGKLLNAAFEQKIEE 282



 Score = 45.1 bits (105), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 25/37 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL    ++R+   FP+
Sbjct: 364 ALEYGMPPTGGLGIGIDRLVMLLTDCASIRDAIAFPL 400


>gi|82703393|ref|YP_412959.1| lysyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|82411458|gb|ABB75567.1| lysyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 507

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 126/295 (42%), Gaps = 24/295 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y  HS   L    V   VR++G +   R  G   F  ++D  G  Q+    D A      
Sbjct: 56  YSEHSTETLEAEPVP--VRVAGRMVLKRVMGKASFATLQDMRGRIQLYIAKDVAGDSAYG 113

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           + R   +  I G      AE       TG++ +    + +L+ +   PLP        + 
Sbjct: 114 AFRHYDLGDILG------AEGTLFRTRTGELSVRVTNLRLLTKSLR-PLPEKFHGLSDQE 166

Query: 124 IRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDF 180
            +++ R+LDL   ++  K  + R+RII ++R  ++   ++E  TP++    P G  AR F
Sbjct: 167 QKYRQRYLDLITNESSRKVFIARSRIIQAIREFLVGHGYLEVETPMM-HPIPGGAAARPF 225

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  G ++ F+I   FR+E   +   P EF  L+  
Sbjct: 226 ITHHNALDMQLY-LRIAPELYLKRLVIGGLEKVFEINRSFRNEGISTRHNP-EFTMLEFY 283

Query: 241 MSFVEQDDILNTMENVLRGV---------FEEFSNGNTVSNNFLRICYDDAIRRY 286
            ++ +   +++  E +LR V         F        ++  F R+   +AIR++
Sbjct: 284 EAYRDYAYLMDLTEALLREVTLKVLGAASFTYQERELDLAQPFARLTITEAIRKF 338



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F     +KE  +     +   Y RA + G+PP 
Sbjct: 415 RFELYIAGREIANGFSELNDPEDQAVRFLEQARAKEAGDAEAMHYDADYIRALEYGLPPT 474

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 475 AGEGIGIDRLVMLLTNSPSIRDVILFP 501


>gi|330318792|gb|AEC11056.1| aspartyl tRNA synthetase [Camellia sinensis]
          Length = 184

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 4/86 (4%)

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLR 276
           CFRDED R++R P EF QLDME +F   +++L   E+++R V  +FS   + S   +F  
Sbjct: 58  CFRDEDLRANRQP-EFTQLDMETAFTPLENMLRLNEDLIRQVI-KFSGDQSYSATQSFPE 115

Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNV 302
                 + +YG D+PD+R  + + +V
Sbjct: 116 AYICCVMSQYGLDRPDVRLDLQLRDV 141


>gi|300692009|ref|YP_003753004.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum PSI07]
 gi|299079069|emb|CBJ51731.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum PSI07]
          Length = 510

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY 526
           +G+D L     +++L   G EIA+G    +  E   + F      K+  +     +   Y
Sbjct: 407 RGSDTLPGITERFELFITGREIANGFSELNDPEDQAERFRKQVEQKDAGDEEAMYYDADY 466

Query: 527 -RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GMPP GG   GIDR+VMLL  + N+R+V LFP
Sbjct: 467 IRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVILFP 504



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 121/278 (43%), Gaps = 20/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q     D    ++  + +  W L   G +++ 
Sbjct: 70  VAIAGRMMLKRVMGKASFATVQDGSGQIQFYITRDRVGEDLYAAFK-HWDL---GDIIAA 125

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N   G++ +  Q++ +LS +   PLP        + ++++ R++DL      +
Sbjct: 126 RGVLFRTN--KGELSVQVQELRLLSKSLR-PLPDKFHGLADQEMKYRQRYVDLIVSPETR 182

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  + RT+ I S+R  M    F+E  TP+L        A+ F+          + L  AP
Sbjct: 183 NTFRARTKAIASLRRHMGDAGFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMF-LRIAP 241

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R ++I   FR+E   S R   EF  ++   ++ +   +++  EN++R
Sbjct: 242 ELYLKRLIVGGFERVYEINRNFRNEG-VSPRHNPEFTMMEFYAAYTDYRWLMDYTENLIR 300

Query: 259 GVFEEFSNGNT---------VSNNFLRICYDDAIRRYG 287
               + +   T         +S  F R+    AI++Y 
Sbjct: 301 QAAIDATGSATLNYQGRELDLSKPFHRLTITQAIQKYA 338


>gi|293606110|ref|ZP_06688475.1| lysine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292815565|gb|EFF74681.1| lysine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 507

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 134/318 (42%), Gaps = 40/318 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW--- 69
            ++  G  V+++G +   R  G   F  ++D  G  Q+  +      E   +   +W   
Sbjct: 59  ALAAAGVTVKVAGRMMLKRVMGKASFATLQDSTGRIQIYLD-RGTLGEDNYAAFKQWDIG 117

Query: 70  -VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ I+G V   +          G++ + A    +LS +   PLP        + +R++ 
Sbjct: 118 DIIAIEGSVFKTN---------KGELSVHAATARLLSKSLR-PLPDKFHGVADQELRYRQ 167

Query: 129 RFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSR 185
           R++DL   D   +    R++ + S+R  M+   F+E  TP+L    P GA  + F+    
Sbjct: 168 RYVDLIMTDATRRTFEARSKAVGSIRQFMLNAGFLEVETPMLH-PIPGGAAAKPFVTHHN 226

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ E
Sbjct: 227 ALDMEMY-LRIAPELYLKRLIVGGFERVFEVNRNFRNEGV-SPRHNPEFTMMEFYAAYAE 284

Query: 246 QDDILNTMENVLR---------GVFEEFSNGNTVSNNFLRICYDDAIRRY--GTDKPDLR 294
              +++  E ++R          V         +S  F R+   +AI +Y  G  +  L 
Sbjct: 285 YRWLMDFTEELIRQAAISATGSAVLTYQERELDLSKPFDRLTICEAILKYAPGYTQAQLD 344

Query: 295 NPIIMHNVTEHFVHSEFR 312
           +P+        FV +E +
Sbjct: 345 DPV--------FVRAELK 354



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E   + F +   +K+  +     +   Y RA + GMPP 
Sbjct: 415 RFELFMTGREIANGFSELNDPEDQAERFRSQVEAKDAGDEEAMFYDADYIRALEYGMPPT 474

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 475 GGCGIGIDRLVMLLTDSPSIRDVILFP 501


>gi|256846712|ref|ZP_05552168.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256717932|gb|EEU31489.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 461

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 116/307 (37%), Gaps = 57/307 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV ++R      F+++ D   +   Q+V       F+    +     + + G ++
Sbjct: 19  IELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSISSTIKVKGTLV 78

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                       +GQ +E+ A KIEI   A+ L  P+  +R   E +R K   L  R +T
Sbjct: 79  KSQG--------SGQDLEVKADKIEIFQKAD-LEYPLQNKRHTFEYLRTKAH-LRARTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+ +  ++       NF+   TPI+T S  EGA +     RV       LP+ 
Sbjct: 129 FSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEMF---RVTTLDMNKLPKK 185

Query: 198 PQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                                 Q       + F   +   P FR E   + R   EF+ +
Sbjct: 186 ENGEIDFTKDFFGKSTNLTVSGQLNVETFCAAFRNVYTFGPTFRAEYSNTARHASEFWMV 245

Query: 238 DMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLR 276
           + E++F +    +   E +++ V +          EF N            N ++N+F R
Sbjct: 246 EPEIAFGDLSANMELAEAMVKFVIKYVMDTCPEEMEFFNSFIEKGLFDKLNNVLNNDFGR 305

Query: 277 ICYDDAI 283
           + Y +AI
Sbjct: 306 VTYTEAI 312



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 15/91 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  EI  G  R    E++ +    +G+++E  E      RFG           PH
Sbjct: 376 DLLAPGIGEIIGGSQREDSFELLTKRMKELGLNEEDYEFYLDLRRFGSF---------PH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R++M L G +N+R+V  FP + N
Sbjct: 427 SGYGLGFERMMMYLTGMQNIRDVIPFPRTPN 457


>gi|21909956|ref|NP_664224.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|39932216|sp|Q8K880|SYK_STRP3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|21904145|gb|AAM79027.1| putative lysyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
          Length = 497

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    DS     +EI K       + ++G VM 
Sbjct: 65  VAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKKADLGDFIGVEGEVMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A K+  LS +   PLP  F      E+I ++ R LDL   R+
Sbjct: 125 TD---------MGELSIKATKLTHLSKSLR-PLPEKFHGLTDIETI-YRKRHLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R+++I+ +R  +   +F+E  TP+L   +   A    V     Q     L  
Sbjct: 174 SFDR-FVTRSKMISEIRRYLDGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI+N  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADYLDIMNLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|325928164|ref|ZP_08189373.1| asparaginyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325541460|gb|EGD12993.1| asparaginyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 464

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 107/270 (39%), Gaps = 40/270 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D   +   QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           +++    +        GQ  E+ A  +EI+   E+ L  P+  +   PE +R       L
Sbjct: 77  VLVKSQGK--------GQSFEIQASGVEIVGWVEDPLTYPIQPKPMTPEFLR---EVAHL 125

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R R  L   + +    +     R   +N F   STPI+T S  EGA       RV+    
Sbjct: 126 RPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMF---RVSTLDM 182

Query: 192 YALPQAPQQ----------YKQLLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
             LP+               +  L  SG            + +   P FR E+  + R  
Sbjct: 183 VNLPRDASGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHL 242

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            EF+ ++ E++F +  +     E  L+ +F
Sbjct: 243 AEFWMIEPEIAFADLAEDARLAEQFLKYLF 272


>gi|294672843|ref|YP_003573459.1| asparagine--tRNA ligase [Prevotella ruminicola 23]
 gi|294473509|gb|ADE82898.1| asparagine--tRNA ligase [Prevotella ruminicola 23]
          Length = 479

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 40/279 (14%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L  ++ G  V + GWV   R    + F+ + D   I   Q+V +P     ++ 
Sbjct: 3   RTKIIDVLKSTEYGKEVCVKGWVRTHRSSKAVDFIALNDGSTIKNVQIVVDPTKFDEQVL 62

Query: 63  KSVRSEWVLCIDG-LVMSRSAETINANIITGQI-ELSAQKIEILSV-AEELPLPVFGERE 119
           K + +   +  +G LV S+ A         GQ  E+ A K+E+  +   + P+   G+  
Sbjct: 63  KDITTGACISAEGTLVESQGA---------GQSSEIQATKLEVYGLCGNDYPMQKKGQS- 112

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R K   + LR +T    +  R  +  ++        F    TP++TAS  EGA +
Sbjct: 113 -FEVMR-KNAHMRLRTNTFGAVMRIRHNMAMAIHTYFHEHGFFYFHTPLITASDCEGAGN 170

Query: 180 FLVPSRVNQGSFYALPQ--------------------APQQYKQLLMASGFDRYFQIAPC 219
                +V   + Y L +                       Q +  L A+     +   P 
Sbjct: 171 MF---QVTTKNLYDLKKDENGKIIYDDDFFGEQTSLTVSGQLEGELGATALGSIYTFGPT 227

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           FR E+  + R   EF+ ++ E++F++Q+++++  E+ ++
Sbjct: 228 FRAENSNTPRHLAEFWMVEPEVAFLDQEELMDLEEDFIK 266


>gi|188992094|ref|YP_001904104.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167733854|emb|CAP52060.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. campestris]
          Length = 464

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 106/270 (39%), Gaps = 40/270 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D   +   QVVA      F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCLAPIQVVATESLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           +++    +        GQ  E+ A  +EI+   E+ L  P+   +  P S  F      L
Sbjct: 77  VLVKSQGK--------GQSFEIQASGVEIVGWVEDPLTYPI---QPKPMSPEFLREVAHL 125

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R R  L   + +    +     R   +N F   STPI+T S  EGA       RV+    
Sbjct: 126 RPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMF---RVSTLDM 182

Query: 192 YALPQAPQQ----------YKQLLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
             LP+  Q            +  L  SG            + +   P FR E+  + R  
Sbjct: 183 VNLPRTAQGEVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHL 242

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            EF+ ++ E++F +  +     E  L+ +F
Sbjct: 243 AEFWMIEPEIAFADLAEDARLAEQFLKYLF 272


>gi|19112684|ref|NP_595892.1| cytoplasmic lysine-tRNA ligase Krs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74626015|sp|Q9UUE6|SYKC_SCHPO RecName: Full=Lysyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|5738524|emb|CAB52801.1| cytoplasmic lysine-tRNA ligase Krs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 591

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 9/183 (4%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRI 148
           G++ + A++  +LS     LP   +G ++    IR + R+LDL   R T  +  V R+RI
Sbjct: 198 GELSIFARQCVLLSPCLRMLPKEHYGLKDL--EIRHRQRYLDLIMNRSTRDR-FVMRSRI 254

Query: 149 INSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I  +R    + +F+E  TP++   +    A+ F+          Y +  AP+ Y ++L+ 
Sbjct: 255 IQYIRHFFDSRDFMEVETPMMNMIAGGATAKPFVTHHNDLDMDLY-MRIAPELYLKMLVV 313

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            G DR ++I   FR+E       P EF  ++   ++ +  D+++T E +L G+ ++ +  
Sbjct: 314 GGLDRVYEIGRQFRNEGADLTHNP-EFTSIEFYQAYADYYDLMDTTEELLSGLVKDLTGS 372

Query: 268 NTV 270
             V
Sbjct: 373 YKV 375



 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   G+DR+VM L  +  +REV LFP
Sbjct: 540 ALEYGLPPTGGWGMGVDRLVMFLTDSNTIREVLLFP 575


>gi|78047215|ref|YP_363390.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|123771404|sp|Q3BV23|SYN_XANC5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|78035645|emb|CAJ23336.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 464

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 107/270 (39%), Gaps = 40/270 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D   +   QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           +++    +        GQ  E+ A  +EI+   E+ L  P+  +   PE +R       L
Sbjct: 77  VLVKSQGK--------GQSFEIQASGVEIVGWVEDPLTYPIQPKPMTPEFLR---EVAHL 125

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R R  L   + +    +     R   +N F   STPI+T S  EGA       RV+    
Sbjct: 126 RPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMF---RVSTLDM 182

Query: 192 YALPQAPQQ----------YKQLLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
             LP+               +  L  SG            + +   P FR E+  + R  
Sbjct: 183 VNLPRDASGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHL 242

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            EF+ ++ E++F +  +     E  L+ +F
Sbjct: 243 AEFWMIEPEIAFADLAEDARLAEQFLKYLF 272


>gi|17545747|ref|NP_519149.1| lysyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|39932228|sp|Q8Y0L5|SYK_RALSO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|17428041|emb|CAD14730.1| putative lysyl-trna synthetase (lysine--trna ligase) (lysrs)
           protein [Ralstonia solanacearum GMI1000]
          Length = 510

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY 526
           +G+D L     +++L   G EIA+G    +  E   + F      K+  +     +   Y
Sbjct: 407 RGSDTLPGITERFELFITGREIANGFSELNDPEDQAERFRKQVEQKDAGDEEAMFYDADY 466

Query: 527 -RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GMPP GG   GIDR+VMLL  + N+R+V LFP
Sbjct: 467 IRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVILFP 504



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 121/283 (42%), Gaps = 20/283 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L+G +   R  G   F  ++D  G  Q     D    ++  + +  W L   G +++ 
Sbjct: 70  VALAGRMMLKRVMGKASFATVQDGSGQIQFYITRDRVGEDVYAAFK-HWDL---GDIVAA 125

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N   G++ +  Q++ +LS +   PLP        + ++++ R++DL      +
Sbjct: 126 RGVLFRTN--KGELSVQVQELRLLSKSLR-PLPDKFHGLADQEMKYRQRYVDLIVSPETR 182

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  + RT+ I S+R  M    F+E  TP+L        A+ F+          + L  AP
Sbjct: 183 NTFRARTKAIASLRHHMSDAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMF-LRIAP 241

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R ++I   FR+E   S R   EF  ++   ++ +   +++  EN++R
Sbjct: 242 ELYLKRLIVGGFERVYEINRNFRNEG-VSPRHNPEFTMMEFYAAYTDYRWLMDYTENLIR 300

Query: 259 GVFEEFSNGNT---------VSNNFLRICYDDAIRRYGTDKPD 292
               + +             +S  F R+    AI++Y     D
Sbjct: 301 QAAIDATGSAALNYQGRELDLSKPFHRLTICQAIQKYAPQYTD 343


>gi|262341118|ref|YP_003283973.1| lysine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
 gi|262272455|gb|ACY40363.1| lysine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
          Length = 496

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 130/292 (44%), Gaps = 40/292 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQV-----------VANPDSACFEIAKSVRSEW 69
           + ++G + R+R  G   F +I+DH G  Q+           +   D+      K +    
Sbjct: 50  ISIAGRLMRLRILGKASFGEIKDHTGCIQIYFSKDHLYSDKMGKEDTYNIFFKKLIDIGD 109

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-----GEREYP--- 121
           ++ + G +               +I + A K+ +LS +   PLP        ++ Y    
Sbjct: 110 IIGVTGFLFRTKM---------NEITIHAHKLTLLSKSIR-PLPQVKIDKKNKKTYDAFS 159

Query: 122 -ESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--A 177
               R++ R++DL   D + +  +KRTRII  +R  +  + ++E  TPIL  S P G  A
Sbjct: 160 NTEQRYRMRYVDLIVNDHVKEIFLKRTRIIQGIRKFLDDKGYLEVDTPIL-QSIPGGAIA 218

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQ 236
           R F           Y L  A + Y + L+  GF   ++ +  FR+E    DR+   EF  
Sbjct: 219 RPFETYHNTLGIPLY-LRIANELYLKRLIIGGFHGVYEFSKNFRNEG--MDRIHNPEFTV 275

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRY 286
           L+  +++ +   ++N  E +++ ++ +F   + +S    F RI   D+I++Y
Sbjct: 276 LEFYIAYKDYYWMMNFTEQLMKCIWNQFKEKDHISFQTPFPRIPILDSIKKY 327



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  GI  GIDR+VMLL    +++EV  FP
Sbjct: 450 RALEFGMPPTAGIGIGIDRLVMLLTQKYSIQEVLFFP 486


>gi|164660706|ref|XP_001731476.1| hypothetical protein MGL_1659 [Malassezia globosa CBS 7966]
 gi|159105376|gb|EDP44262.1| hypothetical protein MGL_1659 [Malassezia globosa CBS 7966]
          Length = 506

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/264 (20%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVA----NPDSACFEIAKSVRSEW 69
           + +   V ++G +H +R  G  + F D+       Q++A    + +   FE    +R   
Sbjct: 45  TQLADVVCVAGRLHNMRASGQKLRFYDLHAEGVKIQIMAQMQDHREGDFFEAHDLLRRGD 104

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           V+ + G         + A    G++ +    I++L+   ++     G     +  R++ R
Sbjct: 105 VVGVKG---------VPAKTKKGELSIVPHAIQLLAPNLKMLPKASGGGFTDQEQRYRKR 155

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +   ++I V R R I  +R  + +  F+E  TP++   +    A+ F+      
Sbjct: 156 YLDLIMNQHVRDIFVTRARTIQYVRRYLDSLGFLEVETPMMNQIAGGASAKPFITHHNDL 215

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           +   + +  AP+ Y + L+  G DR +++   FR+E       P EF   +  M++ +  
Sbjct: 216 KMDLF-MRIAPELYLKELVVGGLDRVYEVGRVFRNESIDQTHNP-EFTTCEFYMAYADMY 273

Query: 248 DILNTMENVLRGVFEEFSNGNTVS 271
           D+++  E+++ G+ +  + G  V+
Sbjct: 274 DLMDITESMVSGLVKAVTGGYKVT 297



 Score = 42.0 bits (97), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 25/39 (64%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + G+PP GG   GIDR+VM L  +  ++EV  FP ++
Sbjct: 464 ALEHGLPPTGGWGMGIDRLVMFLTDSNTIKEVLAFPANK 502


>gi|34763750|ref|ZP_00144669.1| Asparaginyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|27886486|gb|EAA23742.1| Asparaginyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
          Length = 461

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 116/307 (37%), Gaps = 57/307 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV ++R      F+++ D   +   Q+V       F+    +     + + G ++
Sbjct: 19  IELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSISSTIKVKGTLV 78

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                       +GQ +E+ A KIEI   A+ L  P+  +R   E +R K   L  R +T
Sbjct: 79  KSQG--------SGQDLEVKADKIEIFQKAD-LEYPLQNKRHTFEYLRTKAH-LRARTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+ +  ++       NF+   TPI+T S  EGA +     RV       LP+ 
Sbjct: 129 FSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEMF---RVTTLDMNKLPKK 185

Query: 198 PQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                                 Q       + F   +   P FR E   + R   EF+ +
Sbjct: 186 ENGEIDFTKDFFGKSTNLTVSGQLNVETFCAAFRNVYTFGPTFRAEYSNTARHASEFWMV 245

Query: 238 DMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLR 276
           + E++F +    +   E +++ V +          EF N            N ++N+F R
Sbjct: 246 EPEIAFGDLSANMELAEAMVKFVIKYVMDTCPEEMEFFNSFIEKGLFDKLNNVLNNDFGR 305

Query: 277 ICYDDAI 283
           + Y +AI
Sbjct: 306 VTYTEAI 312



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  EI  G  R    E++L     +G+ KE  E      RFG           PH
Sbjct: 376 DLLAPGIGEIIGGSQREDSYEILLNRMEELGLDKESYEFYLDLRRFGSF---------PH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R++M L G +N+R+V  FP + N
Sbjct: 427 SGYGLGFERMMMYLTGMQNIRDVIPFPRTPN 457


>gi|255531462|ref|YP_003091834.1| lysyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255344446|gb|ACU03772.1| lysyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 573

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 33/260 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---------L 71
           + ++G +   R  G   F++++D  G  QV    D  C +  K++ +            +
Sbjct: 55  ISMAGRIMSRRIMGSASFVELQDSTGRIQVYLKRDDLCPDEDKTLYNTVFKKLLDLGDFI 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---------PE 122
            I G V +           TG+I +    + +LS + + PLP+    E          PE
Sbjct: 115 GIKGYVFTTQ---------TGEISVHVTALTLLSKSLK-PLPIVKRDEEGNIYDGFTDPE 164

Query: 123 SIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
            +R++ R++DL  +   K I + R+++IN+MR     + ++E  TPIL        AR F
Sbjct: 165 -MRYRQRYVDLTVNPGFKQIFINRSKVINTMRGYFDNQGWMEVETPILQPIHGGAAARPF 223

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                      Y L  A + Y + L+ +GFD  ++    FR+E       P EF  +++ 
Sbjct: 224 ATHHNTLDMPLY-LRIANELYLKRLIVAGFDGVYEFGKMFRNEGMDRTHNP-EFTSMEIY 281

Query: 241 MSFVEQDDILNTMENVLRGV 260
           +++ +   ++  +E  L  V
Sbjct: 282 VAYKDYIWMMAMVEECLEKV 301



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 19/89 (21%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM-----------SQNFCDLLMGS 575
           RA + GMPP  G+  GIDR+VML+     ++EV  FP             ++F +   G 
Sbjct: 461 RALEYGMPPTSGLGIGIDRLVMLMTDQSTIQEVLFFPQMRPEKKVKITTDEDFVN--AGV 518

Query: 576 PSTVSVEQLRELGLRIVE-----NPKKIL 599
           P+   V+ +R++G+  +E     NP K+ 
Sbjct: 519 PAE-WVQAVRKMGINTIEELKAANPNKVF 546


>gi|261337323|ref|ZP_05965207.1| asparagine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277695|gb|EFA23549.1| asparagine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 467

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 125/317 (39%), Gaps = 70/317 (22%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC-IDGL 76
           G+ V + GWV             IRD      V+ N D +CF   + V +   L   D +
Sbjct: 18  GTTVTVCGWVR-----------SIRDMKNFGFVILN-DGSCFNDVQVVMNRETLANYDDI 65

Query: 77  VMSRSAETINANIITGQI----------ELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               +  ++    +TG++          E++AQ IE+L  A     P+  +R   E +R 
Sbjct: 66  AAQNTGASLK---VTGELKLTPDAKQPFEIAAQSIEVLG-ASSPDYPLQKKRATTEFLR- 120

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGA------- 177
                 +R  T     V R R + +M       +  F+  +TPI+T +  EGA       
Sbjct: 121 --TIQHIRPRTNLFRAVFRIRSVAAMAIHEFFQSRGFVYVNTPIITTNDAEGAGEMFRVT 178

Query: 178 -RDFLVPSRVNQGS------FYALPQAPQQYKQLL---MASGFDRYFQIAPCFRDEDPRS 227
             D   P     G+      F+  P +     QL     A  F   +   P FR ED  +
Sbjct: 179 TLDMTNPPLNEDGTIDWSRDFFGKPASLTVSGQLNAENFAMAFGDVYTFGPTFRAEDSNT 238

Query: 228 DRLPGEFYQLDMEMSFVEQDDILN----TMENVLRGVFEEFSNG---------------- 267
            R   EF+ ++ EM+F + +D ++     +++V+  V E+ ++                 
Sbjct: 239 KRHAAEFWMVEPEMAFADLNDDMDLAQAMLQSVITTVLEQCADELNMLNRFVDKGLLERL 298

Query: 268 -NTVSNNFLRICYDDAI 283
            +  +++F R+ Y DAI
Sbjct: 299 RHVATSDFARVTYTDAI 315


>gi|325917964|ref|ZP_08180133.1| asparaginyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325535821|gb|EGD07648.1| asparaginyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 464

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 107/270 (39%), Gaps = 40/270 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D   +   QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           +++    +        GQ  E+ A  +EI+   E+ L  P+  +   PE +R       L
Sbjct: 77  VLVKSQGK--------GQSFEIQASGVEIVGWVEDPLTYPIQPKPMTPEFLR---EVAHL 125

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R R  L   + +    +     R   +N F   STPI+T S  EGA       RV+    
Sbjct: 126 RPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMF---RVSTLDM 182

Query: 192 YALPQAPQ----------QYKQLLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
             LP+               +  L  SG            + +   P FR E+  + R  
Sbjct: 183 VNLPRDATGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHL 242

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            EF+ ++ E++F +  +     E  L+ +F
Sbjct: 243 AEFWMIEPEIAFADLAEDARLAEQFLKYLF 272


>gi|332288091|ref|YP_004418943.1| asparaginyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330430987|gb|AEC16046.1| asparaginyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 467

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 72/321 (22%), Positives = 125/321 (38%), Gaps = 62/321 (19%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVR 66
           GD+ + +  +   + GWV   R    G+ FL + D   +   QVV        +  ++ +
Sbjct: 13  GDVAIGETAT---VQGWVRTRRDSKAGVSFLAVYDGSCFAPIQVVIE------QTIENYQ 63

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIR 125
           SE +    G  +  + + + +      +E+ AQK+E+    E+    P+  +R   E +R
Sbjct: 64  SEILRLTAGCSVIVTGKVVASPAQGQAVEMQAQKVEVCGWVEDPDTYPMAAKRHSVEYLR 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
                  LR  T     V R R  +  ++      + F   +TP++TAS  EGA +    
Sbjct: 124 ---EVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEGAGEMF-- 178

Query: 184 SRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDE 223
            RV+      LP+  Q                    Q      A    + +   P FR E
Sbjct: 179 -RVSTLDLTNLPKTEQGEIDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAE 237

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------------GNTV 270
           +  + R   EF+ ++ EM+F    D     E++L+ VF+   +              NTV
Sbjct: 238 NSNTTRHLAEFWMVEPEMAFATLADNAKLAEDMLKYVFKAVLDERMDDMEFFAKHIDNTV 297

Query: 271 --------SNNFLRICYDDAI 283
                   S++F ++ Y DAI
Sbjct: 298 ISRLQDFISSDFAQVDYTDAI 318



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 7/83 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    EV+ +    +G+ KE         YR  +  G  PH G  
Sbjct: 382 DVLAPGIGEIIGGSQREERLEVLDKRMDEMGLKKEDY-----WWYRDLRRYGTVPHSGFG 436

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            G +R+++ + G +N+R+V  FP
Sbjct: 437 LGFERLIVYVTGVQNIRDVIPFP 459


>gi|294665953|ref|ZP_06731217.1| asparaginyl-tRNA synthetase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292604256|gb|EFF47643.1| asparaginyl-tRNA synthetase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 464

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 107/270 (39%), Gaps = 40/270 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D   +   QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           +++    +        GQ  E+ A  ++IL   E+ L  P+  +   PE +R       L
Sbjct: 77  VLVKSQGK--------GQSFEIQASGVDILGWVEDPLTYPIQPKPMTPEFLR---EVAHL 125

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R R  L   + +    +     R   +N F   STPI+T S  EGA       RV+    
Sbjct: 126 RPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMF---RVSTLDM 182

Query: 192 YALPQAPQQ----------YKQLLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
             LP+               +  L  SG            + +   P FR E+  + R  
Sbjct: 183 VNLPRDASGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHL 242

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            EF+ ++ E++F +  +     E  L+ +F
Sbjct: 243 AEFWMIEPEIAFADLAEDARLAEQFLKYLF 272


>gi|212709816|ref|ZP_03317944.1| hypothetical protein PROVALCAL_00864 [Providencia alcalifaciens DSM
           30120]
 gi|212687627|gb|EEB47155.1| hypothetical protein PROVALCAL_00864 [Providencia alcalifaciens DSM
           30120]
          Length = 466

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 122/327 (37%), Gaps = 57/327 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VGS V + GWV   R    G  FL + D         NP  A      S  ++ VL +  
Sbjct: 16  VGSEVTVQGWVRTRRDSKAGFSFLAVYDGSCF-----NPLQAIINNNLSNYNDEVLHLTT 70

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL 133
                    +  +   GQ  EL A  I+++   E+    P+  +R    S+ F      L
Sbjct: 71  GCSVEVTGVVTESQGQGQSFELQATAIKVVGWVEDPDTYPMAAKRH---SVEFLREAAHL 127

Query: 134 RRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T     V R R  +  ++      + F   STP++TAS  EGA +     RV+   +
Sbjct: 128 RPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF---RVSTLDY 184

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             LP+  +                    Q      A+   + +   P FR E+  + R  
Sbjct: 185 NNLPRNDKGEVDFSEDFFGREAFLTVSGQLNGEAYATALSKIYTFGPTFRAENSNTSRHL 244

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT-----------V 270
            EF+ L+ E++F   DDI    E +L+  F+          EF                V
Sbjct: 245 AEFWMLEPEVAFANLDDIAGLAEKMLKYAFKAALTERRDDLEFFAERVDKDVINRLERFV 304

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F ++ Y DAI+   T      NP+
Sbjct: 305 NSDFAQVDYTDAIKILETCGQKFENPV 331


>gi|224418996|ref|ZP_03657002.1| lysyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827942|ref|ZP_04870827.1| Lysyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313142508|ref|ZP_07804701.1| lysyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511348|gb|EES90007.1| Lysyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313131539|gb|EFR49156.1| lysyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 497

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 133/305 (43%), Gaps = 40/305 (13%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           +++G +  +R  G   F+ I D+ GI Q+    N     F++ K       + +  ++M+
Sbjct: 62  QVAGRIKFIRLMGKAAFIKIEDNSGILQIYLSKNELGEGFDLFKKY-----IEVGDIIMA 116

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----R 134
           +    +     TG++ L A + +IL+ A   PLP          +R++ R+LDL      
Sbjct: 117 KGFPFVTK---TGELSLHALEFQILTKAIS-PLPEKYHGLVDIEMRYRQRYLDLIMNREV 172

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFY 192
           RDT     V R++II+ +R       F+E  TP++    P GA  + F+          Y
Sbjct: 173 RDTF----VLRSKIISYVRKFFEENGFLEVETPMM-HPIPGGANAKPFVTFHNALNVERY 227

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++ +  D++  
Sbjct: 228 -LRIAPELYLKRLVVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYKDYKDLIRL 285

Query: 253 MENVLRGVFE--------EFSNGNTVSNNFLRICYDDAI-------RRYGTDKPDLRNPI 297
            + +   +F+        +F+      + F  I Y D++       R    ++  L   +
Sbjct: 286 TKALFDYLFKVLKLPKTLQFNEKEIDFSEFREITYVDSLVEIGGIPRDVAINEDRLYEYL 345

Query: 298 IMHNV 302
           + HNV
Sbjct: 346 VSHNV 350



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL G   +++V LFP
Sbjct: 454 ALSYGMPPTAGEGIGIDRLVMLLTGHNIIKDVILFP 489


>gi|218247934|ref|YP_002373305.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|257060743|ref|YP_003138631.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|218168412|gb|ACK67149.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|256590909|gb|ACV01796.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 463

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 84/375 (22%), Positives = 143/375 (38%), Gaps = 73/375 (19%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLV 77
           + + GWV   R      F+++ D   +   QVV +     +E + K + +   + + G +
Sbjct: 19  ITVQGWVRTKRELKEFTFIEVNDGSSMANIQVVLDATLPNYEEVLKRLNTGASVEVLGTL 78

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +    +        GQ IE+ A  I++   ++    P+  +R   E +R     L  R +
Sbjct: 79  VPSPGK--------GQRIEVKASSIQVYGESDPETYPLQKKRHSFEFLR-TIGHLRSRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           TL   +  R     ++       +FI   TPI+TAS  EGA +      V       +PQ
Sbjct: 130 TLGAVMRVRNACATAIHRFFQERDFIWVHTPIITASDCEGAGELFT---VTSFDLSKIPQ 186

Query: 197 APQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +                    Q +  +MA  F   +   P FR E+  + R   EF+ 
Sbjct: 187 TQEKTVDYSQDFFGKRAYLTVSGQLEAEVMAMAFQNVYTFGPTFRAENSNTSRHLAEFWM 246

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFL 275
           ++ EM+F + +      E  L+ +F+          EF N            N ++N F 
Sbjct: 247 VEPEMAFCDLEGDQELAEAFLKYIFKFVLETCSEDMEFFNERIDKSVLETANNIINNEFE 306

Query: 276 RICYDDAIRRYGTDKPDLRNP----IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           RI Y +A++           P    I + +  E ++  E  +F K L V         PA
Sbjct: 307 RITYTEAVKLLEKADRQFEYPVEWGIDLQSEHERYLAEE--LFKKPLIVT------NYPA 358

Query: 332 KGGGGNRAFCDRMNE 346
               G +AF  R+NE
Sbjct: 359 ----GIKAFYMRLNE 369



 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    EV+ Q    +GI +E +   +  L R    G  PH G   G +R+V  
Sbjct: 386 EIIGGSQREERLEVLQQRIQKLGILEEDIW-WYLDLRR---YGTVPHAGFGLGFERLVQF 441

Query: 550 LLGAKNVREVSLFPMS 565
           + G  N+R+V  FP +
Sbjct: 442 MTGMGNIRDVIPFPRT 457


>gi|315503430|ref|YP_004082317.1| lysyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315410049|gb|ADU08166.1| lysyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 502

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 122/271 (45%), Gaps = 20/271 (7%)

Query: 10  GDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           GDL   +  G  V ++G V  +R  G + F  +RD  G T+V A    +   +      +
Sbjct: 55  GDLPTDTATGDRVSVTGRVIFIRNTGKLCFATLRDGDG-TEVQAM--LSLDRVGAERLGD 111

Query: 69  WVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           W   +D G  +  + E I +    G++ + A++  + + A   PLPV   +   E  R +
Sbjct: 112 WKRLVDLGDHVGVTGEVITSR--RGELSVLAEEWAVTAKALR-PLPV-AHKPLSEESRVR 167

Query: 128 YRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R++DL  R    + +  R   + S+R  +  ++FIE  TP+L        AR F+  S 
Sbjct: 168 QRYVDLVVRPQARQMVRTRATAVRSLRDTLHGQDFIEVETPMLQLLHGGAAARPFVTHSN 227

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ + +  +  G DR F+I   FR+E   S   P EF  L+   ++ +
Sbjct: 228 ALDTDLY-LRIAPELFLKRAVVGGVDRVFEINRNFRNEGIDSSHSP-EFAMLEAYQAYGD 285

Query: 246 QDDILNTMENVLRGVFEEFS---NGNTVSNN 273
                +TM  + R + ++ +    G+TV  +
Sbjct: 286 ----YHTMAELTRNLVQQAAVAVAGSTVVTH 312



 Score = 44.3 bits (103), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP GG+  GIDR++M L G   +RE  LFP+
Sbjct: 462 RAMEYGMPPSGGMGMGIDRLLMALTGL-GIRETILFPL 498


>gi|196250797|ref|ZP_03149484.1| lysyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|196209747|gb|EDY04519.1| lysyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 447

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 122/285 (42%), Gaps = 29/285 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  I+D  G  Q+    D      +E+ K      ++ + G +
Sbjct: 13  VAVAGRIMTKRGKGKAGFAHIQDVTGQIQIYVRQDDVGEQQYELFKISDLGDIVGVRGTM 72

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
                         G++ +     E L+ A   LP    G ++  +  R++ R+LDL  +
Sbjct: 73  FKTKV---------GELSIKVSSYEFLTKALRPLPEKYHGLKDVEQ--RYRQRYLDLTMN 121

Query: 137 TLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
              K   + R+ II SMR  + ++ ++E  TP++ A +    AR F+        + Y +
Sbjct: 122 PQSKQTFITRSLIIQSMRRYLDSQGYLEVETPMMHAIAGGAAARPFITHHNALDMTLY-M 180

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G ++ ++I   FR+E   +   P EF  L++  ++ +  DI+   E
Sbjct: 181 RIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP-EFTMLELYEAYADFRDIMKLTE 239

Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY-GTD 289
           N++  +  E      +         +  + R+   DAI+ Y G D
Sbjct: 240 NLIAHIATEVLGTTKIQYGEHTVDLTPEWRRLHMVDAIKEYVGVD 284



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 407 ALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFP 442


>gi|302870294|ref|YP_003838931.1| lysyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302573153|gb|ADL49355.1| lysyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 502

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 122/271 (45%), Gaps = 20/271 (7%)

Query: 10  GDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           GDL   +  G  V ++G V  +R  G + F  +RD  G T+V A    +   +      +
Sbjct: 55  GDLPTDTATGDRVSVTGRVIFIRNTGKLCFATLRDGDG-TEVQAM--LSLDRVGAERLGD 111

Query: 69  WVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           W   +D G  +  + E I +    G++ + A++  + + A   PLPV   +   E  R +
Sbjct: 112 WKRLVDLGDHVGVTGEVITSR--RGELSVLAEEWAVTAKALR-PLPV-AHKPLSEESRVR 167

Query: 128 YRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R++DL  R    + +  R   + S+R  +  ++FIE  TP+L        AR F+  S 
Sbjct: 168 QRYVDLVVRPQARQMVRTRATAVRSLRDTLHGQDFIEVETPMLQLLHGGAAARPFVTHSN 227

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ + +  +  G DR F+I   FR+E   S   P EF  L+   ++ +
Sbjct: 228 ALDTDLY-LRIAPELFLKRAVVGGVDRVFEINRNFRNEGIDSSHSP-EFAMLEAYQAYGD 285

Query: 246 QDDILNTMENVLRGVFEEFS---NGNTVSNN 273
                +TM  + R + ++ +    G+TV  +
Sbjct: 286 ----YHTMAELTRNLVQQAAVAVAGSTVVTH 312



 Score = 44.3 bits (103), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP GG+  GIDR++M L G   +RE  LFP+
Sbjct: 462 RAMEYGMPPSGGMGMGIDRLLMALAGL-GIRETILFPL 498


>gi|114047699|ref|YP_738249.1| asparaginyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|122944635|sp|Q0HUL3|SYN_SHESR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|113889141|gb|ABI43192.1| asparaginyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 466

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 109/281 (38%), Gaps = 48/281 (17%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    GI FL + D             +CF   + V    + 
Sbjct: 12  GEHAVGSTVTVRGWVRTRRDSKAGISFLAVYD------------GSCFNPIQGVVPSSLE 59

Query: 72  CIDGLVMSRSAETINANIITGQI----------ELSAQKIEILSVAEEL-PLPVFGEREY 120
             D  V+  +A    + I+TG+I          EL    +E+    E+    P+  +R  
Sbjct: 60  NYDNEVLKLTAGC--SVIVTGEIVESPGAGQAYELQVTHVEVTGWVEDPDTYPMAAKRHS 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGAR 178
            E +R       LR  T     V R R  ++    R   EN F+  STP++TAS  EGA 
Sbjct: 118 IEHLR---ELAHLRPRTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAG 174

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFR 221
           +    S ++  +          Y +        L  SG            + +   P FR
Sbjct: 175 EMFRVSTLDMENLPRTSDGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFR 234

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            E+  + R   EF+ ++ E++F    DI +  E +L+  F+
Sbjct: 235 AENSNTSRHLAEFWMVEPEVAFATLSDIASLAEGMLKYAFD 275


>gi|303233071|ref|ZP_07319746.1| asparagine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302480846|gb|EFL43931.1| asparagine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 479

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 68/313 (21%), Positives = 127/313 (40%), Gaps = 69/313 (22%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + ++GWV  +R      F+ + D             +CF+  + V     L     + ++
Sbjct: 34  ITVAGWVRSIRDMKNFGFVTLND------------GSCFKDLQVVMERESLHNYEEIAAQ 81

Query: 81  SAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYP-ESIRFKYRFLDLRRDTL 138
           +     A II+G++EL+  + +   + A  + +    E +YP +  R    FL  +    
Sbjct: 82  NVGA--ALIISGEVELTPDRAQPFELHAHTITVEGISEPDYPMQKKRASREFLRTQ---- 135

Query: 139 HKNIVKRTRIINSM-RCRMIA----------ENFIECSTPILTASSPEGARDFL------ 181
            +++  RT +  ++ R R +A            F+   TPI+T+S  EGA +        
Sbjct: 136 -QHLRSRTNLFRAIFRVRSVAAFAIHSFFQERGFVYVHTPIITSSDAEGAGEMFKVTTFD 194

Query: 182 ---VPSRVN----QGSFYALPQAPQQYKQLL---MASGFDRYFQIAPCFRDEDPRSDRLP 231
              VP++         F++ P +     QL     A  F   +   P FR E+  + R  
Sbjct: 195 LEHVPTKDGAVDYSQDFFSAPTSLTVSGQLEAENFAMSFGDVYTFGPTFRAENSNTRRHA 254

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSNG-------NTV 270
            EF+ ++ EM+F + +  ++  E +L+ V              F  F +        + V
Sbjct: 255 AEFWMVEPEMAFCDLEGYMDVAEAMLKYVISYVMKTCPDEMAMFNSFVDKGLEERLQHVV 314

Query: 271 SNNFLRICYDDAI 283
           S++F R+ Y DAI
Sbjct: 315 SSDFARVSYTDAI 327


>gi|282878253|ref|ZP_06287049.1| lysine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299671|gb|EFA92044.1| lysine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 595

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 32/259 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---------VL 71
           V ++G +   R  G   F++++D  G  QV    D  C +  K + +           V+
Sbjct: 74  VVIAGRMMTRRVMGKASFVELQDSKGRIQVYVTRDDICPDENKDLYNVVFKRLLDIGDVI 133

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I G V             TG+I + AQ + +LS A + PLP+        + + + PE 
Sbjct: 134 GIKGFVFKTQ---------TGEISVHAQSLTLLSKALK-PLPIVKYKDGVAYDKFDDPE- 182

Query: 124 IRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           +R++ R++DL   D +    ++R  ++ +MR  +    + E  TP L A +    AR F+
Sbjct: 183 LRYRQRYVDLIVNDGVKDTFLQRATVLRTMRKVLDEAGYTEVETPTLQAIAGGASARPFV 242

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y +  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ +
Sbjct: 243 THFNALNTDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRNHNP-EFTCMELYV 300

Query: 242 SFVEQDDILNTMENVLRGV 260
            + + + ++   E +L  +
Sbjct: 301 QYKDYNWMMAFTEKLLETI 319



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP
Sbjct: 479 RALQYGMPPTSGIGIGIDRLVMLMTGKTFIQEVLFFP 515


>gi|166711570|ref|ZP_02242777.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 464

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 107/270 (39%), Gaps = 40/270 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D   +   QVVAN     F+  + + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEIRRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           +++    +        GQ  E+ A  +EI+   E+ L  P+  +   PE +R       L
Sbjct: 77  VLVKSQGK--------GQSFEIQASGVEIVGWVEDPLTYPIQPKPMTPEFLR---EVAHL 125

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R R  L   + +    +     R   +N F   STPI+T S  EGA       RV+    
Sbjct: 126 RPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMF---RVSTLDM 182

Query: 192 YALPQAPQ----------QYKQLLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
             LP+               +  L  SG            + +   P FR E+  + R  
Sbjct: 183 VNLPRDATGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHL 242

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            EF+ ++ E++F +  +     E  L+ VF
Sbjct: 243 AEFWMIEPEIAFADLAEDARLAEQFLKYVF 272


>gi|289663133|ref|ZP_06484714.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 464

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 106/270 (39%), Gaps = 40/270 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D   +   QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEVKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           +++    +        GQ  E+ A  +EI+   E+ L  P+   +  P S  F      L
Sbjct: 77  VLVKSQGK--------GQSFEIQASGVEIVGWVEDPLTYPI---QPKPMSPEFLREVAHL 125

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R R  L   + +    +     R   +N F   STPI+T S  EGA       RV+    
Sbjct: 126 RPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMF---RVSTLDM 182

Query: 192 YALPQAPQ----------QYKQLLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
             LP+               +  L  SG            + +   P FR E+  + R  
Sbjct: 183 VNLPRDGSGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHL 242

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            EF+ ++ E++F +  +     E  L+ +F
Sbjct: 243 AEFWMIEPEIAFADLAEDARLAEQFLKYLF 272


>gi|253990240|ref|YP_003041596.1| asparaginyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781690|emb|CAQ84853.1| asparaginyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 495

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 109/273 (39%), Gaps = 40/273 (14%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           V S V + GW+   R    GI FL + D   +   Q V N +   ++       + VL +
Sbjct: 45  VDSEVTVRGWIRTRRDSKAGISFLAVYDGSCFNPLQAVVNNNLPNYQ-------DEVLYL 97

Query: 74  DGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFL 131
                     T+ A++  GQ  EL A K+ ++   E+    P+  +R    SI +     
Sbjct: 98  TTGCSVEVTGTVVASLGQGQNFELQATKVVVIGKVEDPDTYPMAAKRH---SIEYLREVA 154

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQG 189
            LR R  L   + +    +     R   EN +   STP++TA+  EGA +     RV+  
Sbjct: 155 HLRPRTNLIGAVARMRHTLAQALHRFFHENGYFWVSTPLITAADTEGAGEMF---RVSTL 211

Query: 190 SFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
               LP   +                    Q      A    + +   P FR E+  + R
Sbjct: 212 DLQNLPLTDKGEVDFNEDFFGREAFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNTSR 271

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
              EF+ L+ E++F + DD  +  EN+L+ VF+
Sbjct: 272 HLAEFWMLEPEVAFADLDDAASLAENMLKYVFK 304


>gi|183985070|ref|YP_001853361.1| lysyl-tRNA synthetase 1 LysS [Mycobacterium marinum M]
 gi|183178396|gb|ACC43506.1| lysyl-tRNA synthetase 1 LysS [Mycobacterium marinum M]
          Length = 498

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 5/155 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLPV   +E  E  R + R++DL  R    +   +R  +I ++R  +    F+E  TP+L
Sbjct: 145 PLPV-AHKEMSEESRVRQRYVDLIVRPQAREVARQRIAVIRAVRNALERRGFLEVETPML 203

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T +    AR F+  S       Y L  AP+ + +  +  GFDR F++   FR+E   S 
Sbjct: 204 QTLAGGAAARPFVTHSNALDIDLY-LRIAPELFLKRCIVGGFDRVFELNRVFRNEGSDST 262

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
             P EF  L+   ++   DD       +++ V +E
Sbjct: 263 HSP-EFSMLETYQTYGTYDDSALITRELIQEVADE 296



 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G   GIDR++M L G  ++RE  LFP+
Sbjct: 457 ALEYGMPPCTGTGMGIDRLLMCLTGL-SIRETVLFPI 492


>gi|166363182|ref|YP_001655455.1| asparaginyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189083274|sp|B0JN99|SYN_MICAN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166085555|dbj|BAG00263.1| asparaginyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 454

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 119/299 (39%), Gaps = 47/299 (15%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLV 77
           V + GWV   R      FL++ D   +   QV+  P    +E + K++ +   + + G +
Sbjct: 18  VTVQGWVRTKRELKEFTFLEVNDGSSLANLQVILEPTLPDYENVLKTISTGAAIAVSGNL 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELP--LPVFGEREYPESIRFKYRFLDLRR 135
           +    +  N       IEL A +I +     + P   P+  +R   E +R     L  R 
Sbjct: 78  VPSPGKGQN-------IELKAAEITLYG---DCPPDYPLQKKRHSFEFLR-TIAHLRART 126

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV--------PSRVN 187
           +TL   +  R     ++      + FI   TPI+TA+  EGA +           P+   
Sbjct: 127 NTLGAVMRVRNACATAIHSFFQEKGFIWVHTPIITANDCEGAGELFTVTSLDLKKPANFA 186

Query: 188 QGSF--YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           +  F   A      Q +  +MA      +   P FR E+  + R   EF+ ++ EM+F +
Sbjct: 187 EDFFGKRAYLTVSGQLQAEVMAMALSNVYTFGPTFRAENSNTSRHLAEFWMVEPEMAFCD 246

Query: 246 QDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRICYDDAI 283
            +   +  E  L+ +F+          +F N            N V++ F RI Y +AI
Sbjct: 247 LEGDQDLAEAFLKYIFKFVLENCPEDLQFFNERIDKTVLSTAENIVNSEFGRITYSEAI 305


>gi|166033143|ref|ZP_02235972.1| hypothetical protein DORFOR_02865 [Dorea formicigenerans ATCC
           27755]
 gi|166027500|gb|EDR46257.1| hypothetical protein DORFOR_02865 [Dorea formicigenerans ATCC
           27755]
          Length = 479

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 112/304 (36%), Gaps = 51/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLV 77
           + + GWV  +R      F+ I D    T  QVV + D   FE I+K      V+    LV
Sbjct: 37  ITVGGWVRSIRDSKAFGFIVINDGTFFTPLQVVYHDDMENFEEISKLNVGAAVVVTGTLV 96

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A+ + +   A     P+  +R   E +R     L  R +T
Sbjct: 97  ATPQAKQ--------PFEIQAKTVTVEG-ASAPDYPLQKKRHSFEYLR-TIAHLRPRTNT 146

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+    ++        F+   TPI+T S  EGA +    + ++  +       
Sbjct: 147 FQAVFRVRSLTAYALHKFFQERGFVYVHTPIITGSDCEGAGEMFRVTTMDMENVPKTEDG 206

Query: 198 PQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              Y Q                    A  F   +   P FR E+  + R   EF+ L+ E
Sbjct: 207 AVDYTQDFFGKETSLTVSGQLNAETYAQAFGNVYTFGPTFRAENSNTTRHAAEFWMLEPE 266

Query: 241 MSFVEQDDILNTMENVLRGV--------------FEEFSNG-------NTVSNNFLRICY 279
           M+F + +D ++  E++L+ V              F  F +        N  ++ F RI Y
Sbjct: 267 MAFADLEDDMDLAEDMLKYVINYVMENAPEEMNFFNSFVDKGLIDRLTNVATSEFARITY 326

Query: 280 DDAI 283
            DAI
Sbjct: 327 TDAI 330



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E +      +G+  E     +G      + G   H G   G +R +M 
Sbjct: 402 EIIGGSQREDDYEKLATRMEELGMKTE----DYGFYMDLRKYGSTRHAGFGLGFERCIMY 457

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 458 LTGMGNIRDVVPFPRTVNNCEL 479


>gi|303233935|ref|ZP_07320584.1| asparagine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302494860|gb|EFL54617.1| asparagine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 461

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/266 (21%), Positives = 109/266 (40%), Gaps = 36/266 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVR-SEWVLCIDGLV 77
           V + GW+   R    + F+++ D   +   Q+V   D+  FE ++ ++ S  ++ +  LV
Sbjct: 19  VEVGGWIKNSRFSKNVGFIELNDGTFFNPVQIVVGKDNEDFEKSEKLKLSSAIIVVGKLV 78

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           ++ +++           E+ A K+ I+        P+  +R   E +R     L  R +T
Sbjct: 79  LTPNSKQ--------PFEIQASKV-IVEGESTDDYPLQKKRHTFEFLR-TILHLRPRTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ- 196
            +     R+R+  ++        F+   TPI+T S  EGA +     RV       LP+ 
Sbjct: 129 FNAVFRVRSRLAFAIHKFFNERGFVYVHTPIITGSDAEGAGEMF---RVTTLDLDNLPKD 185

Query: 197 -------------------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                                 Q +    A  F   +   P FR E   + R   EF+ +
Sbjct: 186 DNGNIDFSQDFFSKSTNLTVSGQLQAEAYALAFRNVYTFGPTFRSEHSNTPRHAAEFWMM 245

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEE 263
           + E+ F + DD+ +  E+++R + ++
Sbjct: 246 EPEICFADLDDVCSLAEDMVRYIIKD 271



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 15/94 (15%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  G  R    E++ Q    +G +KE  +      ++GG+          H
Sbjct: 376 DLLVPGIGELIGGSQREERFELLDQKMDELGFNKEEYKWYLDLRKYGGV---------KH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           GG   G +R+VM + G  N+R+V  FP +   C+
Sbjct: 427 GGFGLGFERMVMYMTGMSNIRDVIPFPRTVGHCE 460


>gi|156046677|ref|XP_001589717.1| aspartate-tRNA ligase [Sclerotinia sclerotiorum 1980]
 gi|154693834|gb|EDN93572.1| aspartate-tRNA ligase [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 571

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 68/310 (21%), Positives = 129/310 (41%), Gaps = 49/310 (15%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRD--HYGITQVVANPDSACFEIAKSVRS 67
           ++G   +G  +++  W+   R  G  + F+++R+  ++ +  VV    SA  E  K V  
Sbjct: 92  EIGEQHIGKTIKVRAWIQNARMQGAKMAFVELREEGNWTVQGVV----SASAE-GKPVSK 146

Query: 68  EWVLCIDGL----------VMSRSAETINANIITGQIELSAQKIEILSVAEEL------P 111
           + V  I GL          V+ +  E++ +  ++   EL   K+ +++ A E+      P
Sbjct: 147 QMVKWIGGLKLESFVAVEAVVQKPLESVKSTKVS-NFELHLAKVYLVAAAPEMLGLGLGP 205

Query: 112 LP-VFGEREYPESIRFKYRFLDLRRDTLHKNIV---------KRTRIINSMR-CRMIAEN 160
                G+ +  E +      L +   T   ++          KR  +  ++   R+  E+
Sbjct: 206 ASRAVGKLDEEEDLSEAAAGLSVTEGTPTASLASHLNNPAMHKRAPVSQAIADIRIAVED 265

Query: 161 ----------FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF 210
                     F +   P L  ++ EG  +       ++ ++ A  Q+PQ YKQ  +A G 
Sbjct: 266 YFCDYLRSHRFKKFHPPCLIGAASEGGANVFRMPYFDKEAYLA--QSPQFYKQFEIAGGR 323

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNT 269
            R + + P FR E+  + R   EF  LD+EM   E   ++L+ +E VL  +F   +    
Sbjct: 324 KRVYCVGPVFRAENSNTPRHMTEFIGLDLEMEIDEHYHEVLHMLEGVLLFIFRNLAENYR 383

Query: 270 VSNNFLRICY 279
                +R  Y
Sbjct: 384 EEIELIRSIY 393


>gi|323485862|ref|ZP_08091197.1| lysyl-tRNA synthetase [Clostridium symbiosum WAL-14163]
 gi|323400850|gb|EGA93213.1| lysyl-tRNA synthetase [Clostridium symbiosum WAL-14163]
          Length = 654

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 124/292 (42%), Gaps = 44/292 (15%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---VLCID 74
           G  V L+G +   R  G   F +I+D  G  Q     DS   E  K  +      V+ I 
Sbjct: 63  GKEVTLAGRMMSKRVMGKASFCNIQDLKGNIQSYVARDSIGEESYKEFKKMDIGDVVGIR 122

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G V             TG+I + A+ + +LS + ++ LP          +R++ R++DL 
Sbjct: 123 GTVFKTK---------TGEISIHAEAVTLLSKSLQI-LPEKFHGLTNTDMRYRQRYVDLI 172

Query: 134 ----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
                RDT     VKR+RII  +R  +    F+E  TP+L  ++   A      +R    
Sbjct: 173 MNPEVRDTF----VKRSRIIKEVRNFLDGRGFMEVETPMLVPNAGGAA------ARPFTT 222

Query: 190 SFYALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            + AL +      + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++
Sbjct: 223 HYNALDEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAY 281

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRRY 286
            +   ++  +E + R V ++               +   F RI   DA+++Y
Sbjct: 282 TDYYGMMELVETMFREVAKKVLGTAKLIYDGVEIDLEKPFERITMVDALKKY 333



 Score = 46.2 bits (108), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A   GMPP GGI  G+DR +MLL  +  +R+V LFP  +  
Sbjct: 460 ALMVGMPPTGGIGIGMDRFIMLLTDSYAIRDVLLFPTMKTL 500


>gi|260171987|ref|ZP_05758399.1| asparaginyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315920299|ref|ZP_07916539.1| asparaginyl-tRNA synthetase [Bacteroides sp. D2]
 gi|313694174|gb|EFS31009.1| asparaginyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 467

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 108/274 (39%), Gaps = 30/274 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L  +D+G+ V + GWV   R    + F+ + D   I  +    D A F+    
Sbjct: 6   RTKIVDLLKRTDIGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNLQVVVDLANFD---- 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPES 123
                 L   G  +S + E + +     ++E+ A++IE+L   +   PL   G      S
Sbjct: 62  -EEMLKLITTGACISVNGEMVESVGSGQKVEVQAREIEVLGTCDNTYPLQKKGH-----S 115

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + F      LR  T     V R R  +  ++      + F    TPI+TAS  EGA    
Sbjct: 116 MEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQMF 175

Query: 182 VPSRVN--------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDED 224
             + +N              +  F+    +     QL   L A+     +   P FR E+
Sbjct: 176 QVTTMNLYDLKKDERGSISYEDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRAEN 235

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             + R   EF+ ++ E++F +  D ++  E  ++
Sbjct: 236 SNTPRHLAEFWMIEPEVAFNDITDNMDLAEEFIK 269


>gi|195426485|ref|XP_002061363.1| GK20764 [Drosophila willistoni]
 gi|194157448|gb|EDW72349.1| GK20764 [Drosophila willistoni]
          Length = 533

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI+SG  R H  E +++   +  +       +      AF+ G  PH G + 
Sbjct: 448 FDMFMRGEEISSGAQRIHDPEYLIERAKHDAVEL----TKLAAYIDAFRYGCSPHAGCSI 503

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VM  LG  N+R+ S+FP
Sbjct: 504 GMERVVMFYLGLNNIRKTSMFP 525



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 105/269 (39%), Gaps = 38/269 (14%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V + G VH  R  G   F  +R      Q        C      + S+ ++   G +  
Sbjct: 91  LVWVRGRVHTSRAKGKQCFPILRQQSSTIQ--------CILAVNDIISKQMVKFTGNIPK 142

Query: 80  RSAETINANIIT----------GQIELSAQKIEILSVAE-ELPLPVFGEREYP------- 121
            S   I A  ++            +EL  +++ ++S A+ +LPL +  +   P       
Sbjct: 143 ESIIDIQAKPVSVPNKIESCTEQTVELCVEQVFVISQAKSQLPLQI-EDASRPLNPDDAG 201

Query: 122 -------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                  +  R   R LDLR             +    R  +    F E  TP +     
Sbjct: 202 GLNIRVNQDTRLNNRVLDLRTPANQAIFRLEAGVCRLFRDILTENGFTEIHTPKIQLPD- 260

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EG   F   +   + ++ A+ Q    ++Q+ +A+ F++ F +   FR ED  + R   EF
Sbjct: 261 EGGEYFFTVNYFKETAYLAVSQYI--HRQMAIAADFEKVFTVGAVFRAEDSHTHRHLIEF 318

Query: 235 YQLDMEMSF-VEQDDILNTMENVLRGVFE 262
             LD+EM+F     ++L+T+ N L  +F+
Sbjct: 319 VGLDLEMTFKYHYHEVLHTISNTLTAIFK 347


>gi|163938085|ref|YP_001642969.1| lysyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229009586|ref|ZP_04166813.1| Lysyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229053923|ref|ZP_04195358.1| Lysyl-tRNA synthetase [Bacillus cereus AH603]
 gi|229165065|ref|ZP_04292861.1| Lysyl-tRNA synthetase [Bacillus cereus AH621]
 gi|226710882|sp|A9VN90|SYK_BACWK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|163860282|gb|ABY41341.1| lysyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228618450|gb|EEK75479.1| Lysyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228721464|gb|EEL72984.1| Lysyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228751730|gb|EEM01529.1| Lysyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 499

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 140/332 (42%), Gaps = 54/332 (16%)

Query: 5   RTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RT+S  DL VS  G F           V ++G +   R  G   F  I+D  G  Q+   
Sbjct: 37  RTNSTTDL-VSLYGEFSKEELEEKEITVSIAGRIMTKRGKGKAGFAHIQDLQGQVQIYVR 95

Query: 54  PDSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
            D+     +E+  +     ++ I+G V             T   ELS + I    + + L
Sbjct: 96  KDTVGDEEYELFTTADLGDLVGIEGKVFK-----------TNVGELSVKAIGFTLLTKSL 144

Query: 111 -PLP--VFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFI 162
            PLP    G ++  +  R++ R+LDL      R+T     V R++II  MR  +    ++
Sbjct: 145 RPLPDKYHGLKDVEQ--RYRQRYLDLITSMESRETF----VTRSKIIREMRRYLDDNGYL 198

Query: 163 ECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           E  TP++ A +    AR F           Y +  A + + + L+  G ++ ++I   FR
Sbjct: 199 EVETPMMHAIAGGASARPFTTHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFR 257

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN--------- 272
           +E   +   P EF  +++  ++ + +DI+   EN++  + ++     T+           
Sbjct: 258 NEGVSTRHNP-EFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEINLEP 316

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            + R+   DAI+++     D  NP+ +    E
Sbjct: 317 EWTRLHMVDAIKQHSG--ADFWNPMSVEEARE 346



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|317507814|ref|ZP_07965515.1| lysyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316253856|gb|EFV13225.1| lysyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 501

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 13/210 (6%)

Query: 61  IAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           I +   + W   +D G ++    E I++    G++ + AQ  +  + A   PLPV   +E
Sbjct: 100 IGEEALARWKADVDLGDIVFVRGEVISSK--RGELSVMAQSWQFAAKALR-PLPV-AHKE 155

Query: 120 YPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGA 177
             E  R + R+LDL  R         R  ++  +R  +    F+E  TPIL T      A
Sbjct: 156 LSEETRVRQRYLDLIMRPEARAMARTRVAVLRELREALGRRGFLEVETPILQTIQGGASA 215

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R F+  S      FY L  AP+ + +  +  G +R F+I   FR+E   +   P EF  L
Sbjct: 216 RPFVTHSNALDIDFY-LRIAPELFLKRCLVGGLERVFEINRNFRNEGIDATHSP-EFTML 273

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
           +   ++   D    TM  + R V +E + G
Sbjct: 274 EAYEAYGTYD----TMAVLTREVVQEVARG 299



 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPH 536
           ++DL   GFE+A+G        V  + F    + +   +     L      A + GMPP 
Sbjct: 410 KWDLYVRGFELATGYSELVDPVVQRERFQAQALLRSAGDGEAMPLDEDFLAAMEHGMPPA 469

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           GGI  G+DR++    G   +R+  LFP+++
Sbjct: 470 GGIGLGVDRLLTAFTGL-GIRDTVLFPVTR 498


>gi|269115224|ref|YP_003302987.1| Asparaginyl-tRNA-synthetase [Mycoplasma hominis]
 gi|268322849|emb|CAX37584.1| Asparaginyl-tRNA-synthetase [Mycoplasma hominis ATCC 23114]
          Length = 448

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 30/272 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           + + GW+   R +  I F+ I D   I   Q+V   D A   EI++      V  I  L 
Sbjct: 19  LTIEGWIISNRGNDKIRFITINDGSTIANMQLVIKGDLASKKEISEIAVGSAVSVIGKLH 78

Query: 78  MSRSAETINANIITGQIELSAQK-IEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-R 135
           ++  A            ELS  K + I +  E+ P+     ++   S+ F      LR R
Sbjct: 79  LTPEA--------MQPFELSVSKFLYINNPQEDFPI-----QKKETSLDFLREIPQLRHR 125

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY-- 192
            +L + I+  R  ++  +     ++ F+  S+PI+T++  EGA + L+    ++  F+  
Sbjct: 126 TSLFRAIMLIRNSLMFEIHKYFQSKGFLNLSSPIITSNDGEGAGETLLVDDESKDYFFKQ 185

Query: 193 -ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE------ 245
            A      Q      A GF + +   P FR E+  + R   EF+ ++ E++F +      
Sbjct: 186 KAFLGVTGQLHAESYAEGFKKVYTFGPTFRAENSHTSRHLAEFWMMEPEVAFCDLKGIIE 245

Query: 246 -QDDIL-NTMENVLRGVFEEFSNGNTVSNNFL 275
             DD+L N + N L+   EE    +++ NN L
Sbjct: 246 ITDDMLKNVIANTLKNCPEEMKYLDSLQNNKL 277


>gi|170702007|ref|ZP_02892927.1| lysyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170133097|gb|EDT01505.1| lysyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 508

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 33/271 (12%)

Query: 6   THSCGDLGV----SDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL      SD  +       V ++G +   R  G   F  ++D  G  Q    P+
Sbjct: 43  THHAADLQATFADSDKATLEANPVEVSVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPN 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + + +W L   G +++        N   G++ +  +++ +LS A   PLP  
Sbjct: 103 DVGAETYDAFK-KWDL---GDIVAARGVLFRTN--KGELSVQCKELRLLSKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                 + +R++ R++DL      RDT       RTR I S+R  M   +F+E  TP+L 
Sbjct: 156 FHGLADQEMRYRQRYVDLIVTPETRDTFRA----RTRTIASIRKFMDNADFMEVETPMLH 211

Query: 171 A-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRS 227
                  A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   PR 
Sbjct: 212 PIPGGAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRH 270

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +    EF  ++   ++ +   +++  E ++R
Sbjct: 271 N---PEFTMMEFYAAYTDYRWLMDFTEQLIR 298



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFMTGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMFFDADYIRALEHGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|302672111|ref|YP_003832071.1| lysyl-tRNA synthetase LysS [Butyrivibrio proteoclasticus B316]
 gi|302396584|gb|ADL35489.1| lysyl-tRNA synthetase LysS [Butyrivibrio proteoclasticus B316]
          Length = 523

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 97/207 (46%), Gaps = 12/207 (5%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           TG+I +  +++ +LS +  +PLP          IR++ R++DL   + + +   KR+ I+
Sbjct: 151 TGEISVHVKELTLLSKSL-MPLPEKFHGLTDTEIRYRQRYVDLIMNEDVKETFKKRSAIL 209

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
             +R  +   +F+E  TP+L  ++   A    +           L  + + Y + L+  G
Sbjct: 210 REIRNFLADRDFLEVETPMLVENAGGAAARPFITHYNALDEERKLRISLELYLKRLIVGG 269

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF----- 264
            +R ++I   FR+E   +   P EF  +++  ++ + + ++   E++ R + E+      
Sbjct: 270 LERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMELTESMFRYLAEKVCGTTL 328

Query: 265 ----SNGNTVSNNFLRICYDDAIRRYG 287
                N   +   F R+  +DAI++Y 
Sbjct: 329 IKYGDNEIDLGKPFERLTMNDAIKKYA 355



 Score = 45.4 bits (106), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GM P GGI  GIDR+ MLL  ++ +R+V LFP
Sbjct: 481 ALEIGMAPTGGIGYGIDRLCMLLTDSETIRDVLLFP 516


>gi|300123418|emb|CBK24691.2| unnamed protein product [Blastocystis hominis]
          Length = 574

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 5/182 (2%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           G++ +    I+ILS     LP P  G    PE+ R++ R+LDL    ++    + R+R+I
Sbjct: 185 GELSIFPYSIQILSPCLHMLPKPFIGLTN-PET-RYRMRYLDLIMNPSVRDKFIIRSRVI 242

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
             +R  +    FIE  TP++   +        +    +      +  AP+ Y + L+  G
Sbjct: 243 RGIRSFLDERGFIEVETPMMNMHAGGATAKPFITHHNDLNLDLYMRIAPELYLKQLVIGG 302

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
            DR +++   FR+E       P EF   +  M++ +  DI+   E ++ G+ ++ + G  
Sbjct: 303 MDRVYELGRQFRNESIDMTHNP-EFTTCEFYMAYADVYDIMELTEQMVSGIVKDITGGYK 361

Query: 270 VS 271
           + 
Sbjct: 362 IQ 363



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   G+DR+ M L  + N++EV LFP
Sbjct: 525 ALEHGLPPTGGWGLGVDRLTMFLTDSNNIKEVLLFP 560


>gi|322389927|ref|ZP_08063467.1| lysine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321143363|gb|EFX38801.1| lysine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 496

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 112/251 (44%), Gaps = 19/251 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
           + D+     ++G +   R  G + F  ++D  G  Q+    D+     +EI K       
Sbjct: 56  LHDLNETAIIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDF 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           L ++G +M             G++ + A  I  LS A   PLP  F      E+I ++ R
Sbjct: 116 LGVEGEIMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLSDVETI-YRKR 164

Query: 130 FLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +LDL   R++  +  V R++II+ +R  +  + F+E  TP+L   +   A    +     
Sbjct: 165 YLDLISNRESFER-FVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAAKPFITHHNA 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Q     L  A + + + L+  G +  ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 224 QNIDMVLRIATELHLKRLIVGGMECVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFH 282

Query: 248 DILNTMENVLR 258
           DI++  E +++
Sbjct: 283 DIMDLTEGIIQ 293



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           LQ F     +KE+ ++   G+      A + GMPP GG+  GIDR+VMLL     +R+V 
Sbjct: 431 LQRFEAQARAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTNVTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|300716101|ref|YP_003740904.1| Asparaginyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299061937|emb|CAX59053.1| Asparaginyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 466

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 109/276 (39%), Gaps = 46/276 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V S V + GWV R R          RD       +A  D +CF   ++V +  +      
Sbjct: 16  VDSEVTVRGWV-RTR----------RDSKAGISFIAVYDGSCFNPVQAVVNNSLNNYQDE 64

Query: 77  VMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFKY 128
           V+  +  T  + IITG++  S    Q  EI + A E+   V     YP      SI +  
Sbjct: 65  VLRLT--TGCSVIITGKVVESPGEGQSFEIQATAVEVVGWVDDPDTYPMAAKRHSIEYLR 122

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   STP++TAS  EGA +     RV
Sbjct: 123 EVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF---RV 179

Query: 187 NQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +      LP+ P+                    Q      AS   + +   P FR E+  
Sbjct: 180 STLDMENLPRTPEGKVNFDEDFFGKEAFLTVSGQLNGETYASAISKIYTFGPTFRAENSN 239

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + R   EF+ L+ E++F + +D     E +L+ VF+
Sbjct: 240 TSRHLAEFWMLEPEIAFADLEDNAALAEAMLKYVFK 275



 Score = 38.5 bits (88), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIAFPRT 460


>gi|107028702|ref|YP_625797.1| lysyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116690139|ref|YP_835762.1| lysyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|170733472|ref|YP_001765419.1| lysyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|254247790|ref|ZP_04941111.1| Lysyl-tRNA synthetase (class II) [Burkholderia cenocepacia PC184]
 gi|122977748|sp|Q1BHT1|SYK_BURCA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229795|sp|A0K8P2|SYK_BURCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238688559|sp|B1JUZ7|SYK_BURCC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|105897866|gb|ABF80824.1| lysyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116648228|gb|ABK08869.1| lysyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|124872566|gb|EAY64282.1| Lysyl-tRNA synthetase (class II) [Burkholderia cenocepacia PC184]
 gi|169816714|gb|ACA91297.1| lysyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 508

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 124/289 (42%), Gaps = 32/289 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q    P+    +   + + +W L   G +++ 
Sbjct: 68  VSVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPNDVGADTYDAFK-KWDL---GDIVAA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----RR 135
                  N   G++ +  +++ +LS A   PLP        + +R++ R++DL      R
Sbjct: 124 RGVLFRTN--KGELSVQCKELRLLSKALR-PLPDKFHGLSDQEMRYRQRYVDLIVTPETR 180

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
           DT       RT+ I S+R  M   +F+E  TP+L        A+ F+          + L
Sbjct: 181 DTFRA----RTKTIASIRKFMDNADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMF-L 235

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
             AP+ Y + L+  GF+R F+I   FR+E   PR +    EF  ++   ++ +   +++ 
Sbjct: 236 RIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHN---PEFTMMEFYAAYTDYRWLMDF 292

Query: 253 MENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
            E ++R    +     T+         +  F R+    AI++Y  D  D
Sbjct: 293 TEQLIRQAAIDALGTATIQYQGRELDLAKPFHRLTITQAIQKYAPDYTD 341



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFMTGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|323126879|gb|ADX24176.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 500

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    DS     +EI K       + ++G VM 
Sbjct: 69  VAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKKADLGDFIGVEGEVMR 128

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A K+  LS +   PLP  F      E+I ++ R LDL   R+
Sbjct: 129 TD---------MGELSIKATKLTHLSKSLR-PLPEKFHGLTDIETI-YRKRHLDLISNRE 177

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R+++I+ +R  +   +F+E  TP+L   +   A    V     Q     L  
Sbjct: 178 SFDR-FVTRSKMISEIRRYLDGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRI 236

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI+N  E +
Sbjct: 237 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADYLDIMNLTEGI 295

Query: 257 LR 258
           ++
Sbjct: 296 IQ 297



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 435 LSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVL 494

Query: 561 LFP 563
           LFP
Sbjct: 495 LFP 497


>gi|195161006|ref|XP_002021361.1| GL25284 [Drosophila persimilis]
 gi|194118474|gb|EDW40517.1| GL25284 [Drosophila persimilis]
          Length = 517

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 10/229 (4%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRS-EWVLCIDG 75
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V   D  C      V S E  + + G
Sbjct: 94  GVRVKIFGWVHRLRRQGKALMFLTLRDGTGFLQCVLT-DLLCQTYQALVLSTESSVVLYG 152

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           ++ +      +  I  G  EL     E++ +A           E    ++   R + +R 
Sbjct: 153 ILKA----VPSGKIAPGGHELHVDYWELIGLAPPGGADAILNEEALPDVQLDNRHIMIRG 208

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +   K +  R+ ++ + R       + E + P L  +  EG           + +F  L 
Sbjct: 209 ENTSKVLKMRSVVMQAFRDHYFDRGYNEVTPPTLVQTQVEGGSTLFKMQFFGEEAF--LT 266

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+
Sbjct: 267 QSSQLYLETCLPALGD-VFTIAQSYRAEQSRTRRHLAEYTHVEAECPFI 314



 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 12/90 (13%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGI 539
           L+ N  EI  G +R   SE +L  +   GI         + R  G          PHGG 
Sbjct: 434 LLPNVGEIVGGSMRIWDSEELLNGYKREGIDPTPYYWYTDQRIYGTI--------PHGGY 485

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G++R +  LL   ++REV L+P   + C
Sbjct: 486 GLGLERFLCWLLNRYHIREVCLYPRFLDRC 515


>gi|71897687|ref|ZP_00679932.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Ann-1]
 gi|71732590|gb|EAO34643.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Ann-1]
          Length = 506

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 117/277 (42%), Gaps = 23/277 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ------VVANPDSACFEIAKSVRSEWVLCID 74
           VR++G +   R  G   F  I+D  G  Q      V+     A F++      + +    
Sbjct: 70  VRMAGRLMAKRLMGKASFAQIQDESGRIQLLIQSNVLGEDSYAAFKVLDV--GDIIAVEG 127

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           GL  +R          TG++ +    + +L+ A   PLP           R++ R++DL 
Sbjct: 128 GLTRTR----------TGELSVKVNVLRLLTKALR-PLPDKWHGLTDVEQRYRQRYVDLI 176

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
                + I +KR++II ++R  + A  F+E  TP++        A+ F+          Y
Sbjct: 177 VTPESREIFIKRSKIIRALRTWLDARLFLEVETPMMHYIPGGAAAKPFVTYHNALDLELY 236

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  G +R ++I   FR+E   +   P EF  L++  ++    ++++ 
Sbjct: 237 -LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRHNP-EFTMLELYEAYSTYHEVMDL 294

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            E ++R   +       V  +  +I      RR+  D
Sbjct: 295 AETMIRDTAQSVLGTTQVIWDGAQIDLGPIFRRWRMD 331



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY 526
           + +D+ S    +++L  NG EIA+G    +  E     F     +KE  ++    +   Y
Sbjct: 403 RESDIESGYTDRFELFINGKEIANGFSELNDPEEQAMRFQKQVEAKEGGDDEAMYYDADY 462

Query: 527 -RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  G+DR+VMLL G+ ++R+V LFP
Sbjct: 463 IRALEYGMAPTGGLGIGVDRLVMLLTGSTSIRDVLLFP 500


>gi|209559054|ref|YP_002285526.1| lysyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|238064862|sp|B5XKG9|SYK_STRPZ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|209540255|gb|ACI60831.1| Lysyl-tRNA synthetase (class II) [Streptococcus pyogenes NZ131]
          Length = 497

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    DS     +EI K       + ++G VM 
Sbjct: 65  VAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKKADLGDFIGVEGEVMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A K+  LS +   PLP  F      E+I ++ R LDL   R+
Sbjct: 125 TD---------MGELSIKATKLTHLSKSLR-PLPEKFHGLTDIETI-YRKRHLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R+++I+ +R  +   +F+E  TP+L   +   A    V     Q     L  
Sbjct: 174 SFDR-FVTRSKMISEIRRYLDGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI+N  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADYLDIMNLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|330470480|ref|YP_004408223.1| lysyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328813451|gb|AEB47623.1| lysyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 502

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 117/264 (44%), Gaps = 21/264 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEWVLCID- 74
            G  V ++G V  VR  G + F  +RD  G   Q + + D    E       +W   ID 
Sbjct: 63  TGDRVSVTGRVIFVRNTGKLCFATLRDGDGTELQAMLSLDRVGAERL----DDWKRLIDL 118

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G ++  + E I +    G++ + A++  + + A   PLPV   +   E  R + R++DL 
Sbjct: 119 GDLVGITGEVITSR--RGELSVLAEEWAVTAKALR-PLPV-AHKPLSEEARVRQRYVDLI 174

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            R    + +  R   + S+R  +  + FIE  TP+L        AR F+  S       Y
Sbjct: 175 VRPQARQMVRTRAAAVRSLRDLLHDKGFIEVETPMLQLLHGGAAARPFVTHSNALDTDLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ + +  +  G +R F+I   FR+E   S   P EF  L+   ++ +     NT
Sbjct: 235 -LRIAPELFLKRAVVGGVERVFEINRNFRNEGIDSSHSP-EFAMLEAYQAYGD----YNT 288

Query: 253 MENVLRGVFEE---FSNGNTVSNN 273
           M  + R + ++    + G+TV  +
Sbjct: 289 MAELTRNLIQQAAIAATGSTVVTH 312



 Score = 44.3 bits (103), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP GG+  GIDR++M L G   +RE  LFP+
Sbjct: 462 RAMEYGMPPAGGMGMGIDRLLMALTGL-GIRETILFPL 498


>gi|312385932|gb|EFR30320.1| hypothetical protein AND_00184 [Anopheles darlingi]
          Length = 436

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 71/319 (22%), Positives = 129/319 (40%), Gaps = 63/319 (19%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           GWV  VR   G +F+D+ D  G T       +A F++        V+  D  + +    +
Sbjct: 2   GWVKSVRNLKGNLFVDVND--GST-------AANFQL--------VISKDKQLDTAYGSS 44

Query: 85  INA--NIITGQIELSAQKIEILSVAEELPL----PVFGEREYPESIRFKYRFLDLRRDTL 138
           ++A   ++T        +++ L      PL    P + ++ YP      +  L  R  ++
Sbjct: 45  VDACGVLVTSPKNRLELQVDSLKEIGTCPLTEGFPFYPKKSYPPEYVRNHLHLRSRVSSM 104

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVP----------SRVN 187
                 R     +    +    FI+  TP+LT++  EGA + FLV           ++ N
Sbjct: 105 CSTFRVRHEAQRAFNEYLHQNGFIQIHTPVLTSNDCEGAGEAFLVKPLNDQLLKGMAKAN 164

Query: 188 QGSFYALPQAPQ------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
               +A    P       Q     M+ G D+ +   P FR E+ +S+    EFY L++E 
Sbjct: 165 VAMEHAYFDRPTFLTVSGQLHLEAMSHGLDKVYTFGPTFRAENCKSNIHLSEFYMLELEE 224

Query: 242 SFVEQDD----------------ILNTMENVLRGVFEEFSNGNT-------VSNNFLRIC 278
           +F+E  +                +L+  E  +R V ++ S+ +        +   F R+ 
Sbjct: 225 AFMESVEELADRIEDMLKRVTVLMLDRSETDVRLVRKQTSSDDDRKDAFGWLEKPFPRLT 284

Query: 279 YDDAIRRYGTDKPDLRNPI 297
           YD+AI     +K  L++P+
Sbjct: 285 YDEAIAVLRANKDKLKSPV 303


>gi|306827767|ref|ZP_07461039.1| lysine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304430085|gb|EFM33122.1| lysine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 497

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    DS     +EI K       + ++G VM 
Sbjct: 65  VAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKKADLGDFIGVEGEVMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A K+  LS +   PLP  F      E+I ++ R LDL   R+
Sbjct: 125 TD---------MGELSIKATKLTHLSKSLR-PLPEKFHGLTDIETI-YRKRHLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R+++I+ +R  +   +F+E  TP+L   +   A    V     Q     L  
Sbjct: 174 SFDR-FVTRSKMISEIRRYLDGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI+N  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADYLDIMNLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|251789278|ref|YP_003003999.1| asparaginyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247537899|gb|ACT06520.1| asparaginyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 466

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 126/328 (38%), Gaps = 59/328 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           V S V + GWV   R    GI F+ + D   +   Q V N + A ++      S+ +   
Sbjct: 16  VDSDVTVRGWVRTRRDSKAGISFIAVYDGSCFDSLQAVVNNNLANYQ------SDVLRLT 69

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLD 132
            G  +  + + + +       EL A +++++   E+    P+  +R    SI +      
Sbjct: 70  TGCSVEVTGKVVESPGEGQSFELQATELKVVGWVEDPDTYPMAAKRH---SIEYLREVAH 126

Query: 133 LRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T     V R R  +  ++        F   STP++TAS  EGA +     RV+   
Sbjct: 127 LRPRTNLIGAVARVRHTLAQAIHRFFHQSGFYWVSTPLITASDTEGAGEMF---RVSTLD 183

Query: 191 FYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
              LP+  Q                    Q      A    + +   P FR E+  + R 
Sbjct: 184 LENLPRDDQGKVDFSEDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRH 243

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVF----EEFSNGNT----------------- 269
             EF+ ++ E++F   DDI    EN+L+ VF    EE ++                    
Sbjct: 244 LAEFWMIEPEVAFATLDDIAALAENLLKFVFKAVLEERADDMKFFAERVDKDAVSRLERF 303

Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           VS++F+++ Y DAI           NP+
Sbjct: 304 VSSDFVQVDYTDAITILENCGQTFENPV 331


>gi|303289054|ref|XP_003063815.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226454883|gb|EEH52188.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 692

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 22/256 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC---FE-IAKSVRS 67
           GV D    + ++G +   R  G  + F D+R      QV+A+   A    FE I  S R 
Sbjct: 118 GVVDESVKISVAGRLMSKRASGTKLYFYDLRGDGVKVQVMADAKMATEYDFEKINMSTRR 177

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             ++ I G                G++ +    +E+L+    + LP F   +  E+ R++
Sbjct: 178 GDIVGIRGYA---------GKSKRGELSIFPCHLEVLTPCLHM-LPGFSGLKDQET-RYR 226

Query: 128 YRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPS 184
            RFLDL  +   ++I + R+ II S+R  +  ++F+E  TP++    P GA  + F+   
Sbjct: 227 KRFLDLIMNPEVRDIFITRSNIIRSIRKYLDDQDFVEVETPMMNMI-PGGATAKPFITHH 285

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                + Y +  AP+ + + L+  G DR ++I   FR+E       P EF   +  M++ 
Sbjct: 286 NDLDMTLY-MRIAPELFLKELVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYMAYA 343

Query: 245 EQDDILNTMENVLRGV 260
           + +D++   E+++ G+
Sbjct: 344 DYEDLMKMTEDLVSGM 359



 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ MLL    N++EV LFP
Sbjct: 550 ALEYGLPPTGGWGLGIDRLTMLLTDTANIKEVLLFP 585


>gi|2501018|sp|Q49158|SYK_MYCFE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1263074|gb|AAC43988.1| lysyl-tRNA synthetase [Mycoplasma fermentans]
          Length = 488

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 130/286 (45%), Gaps = 32/286 (11%)

Query: 5   RTHSCGDLGVSD-----VGSFVRLSGWVHRVRPH--GGII-----FLDIRDHYGITQVVA 52
           + +  G L  SD      G F R      +V+ +  G +I     FL ++D  G  QV  
Sbjct: 28  KAYGLGKLSTSDELNKKYGQFAREELEAKKVKKNISGRLITARGPFLVLKDRKGTIQVYF 87

Query: 53  NP--DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EE 109
           N   +    +I ++     +L + GL+M            T ++ + AQ I++L+ A + 
Sbjct: 88  NKKENPELTKIVETFDLGDILWVRGLLMKTH---------TCEMTVRAQDIQLLTKALKP 138

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPI 168
           LP    G  +  E  R+++R+LDL  +   +N  + RT+I+  +R      +++E  TP 
Sbjct: 139 LPDKFHGLTDTEE--RYRHRYLDLITNPESRNTFIMRTKIVQWIRDYFNKLDYLEAETPF 196

Query: 169 LTAS-SPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           L    S   A+ F    + +NQ   + L  A +   + L+  GF+R +++   FR+E   
Sbjct: 197 LHDYLSGAAAKPFTTHHNSLNQD--FVLRIATEIPLKKLVVGGFERVYEMGRIFRNEGYD 254

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN 272
           +   P EF  ++   ++   + ++N  E +++ + ++      V+N
Sbjct: 255 TTHNP-EFTTIEFYEAYSNVEGMMNRTETLIKELCKKIGKSKFVTN 299



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG   GIDR+VMLL    ++R+V LFP
Sbjct: 446 ALEYGMPPTGGCGIGIDRLVMLLTETDSIRDVLLFP 481


>gi|94988116|ref|YP_596217.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94989997|ref|YP_598097.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94992003|ref|YP_600102.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94993910|ref|YP_602008.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|251782024|ref|YP_002996326.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|94541624|gb|ABF31673.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94543505|gb|ABF33553.1| Lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94545511|gb|ABF35558.1| Lysyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94547418|gb|ABF37464.1| Lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|242390653|dbj|BAH81112.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 501

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    DS     +EI K       + ++G VM 
Sbjct: 69  VAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKKADLGDFIGVEGEVMR 128

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A K+  LS +   PLP  F      E+I ++ R LDL   R+
Sbjct: 129 TD---------MGELSIKATKLTHLSKSLR-PLPEKFHGLTDIETI-YRKRHLDLISNRE 177

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R+++I+ +R  +   +F+E  TP+L   +   A    V     Q     L  
Sbjct: 178 SFDR-FVTRSKMISEIRRYLDGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRI 236

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI+N  E +
Sbjct: 237 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADYLDIMNLTEGI 295

Query: 257 LR 258
           ++
Sbjct: 296 IQ 297



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 435 LSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVL 494

Query: 561 LFP 563
           LFP
Sbjct: 495 LFP 497


>gi|328868550|gb|EGG16928.1| asparagine-tRNA ligase [Dictyostelium fasciculatum]
          Length = 512

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 118/307 (38%), Gaps = 43/307 (14%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLC 72
           S VG  V + GW+  +R      F ++ D   +   QV+  P       A++     V  
Sbjct: 61  SKVGDIVTVKGWIKNMRHQKQFSFAELTDGSCVQGLQVIGTPQ----HFAETTNGCCVSV 116

Query: 73  IDGLVMSRSA-ETINANIITGQI---ELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
              L  S    +++   +   Q    + +   +++L   ++   P+  ++   E +R   
Sbjct: 117 TGKLTQSPGKNQSLEIQLFDEQQSSGDNTTSGVKVLGKCDDSEYPLQPKQHSFEFLR-DI 175

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-RDFLVPSRVN 187
             L  R +T+   I  R    + +        F    TP++TAS  EG    F + + VN
Sbjct: 176 AHLRSRSNTIGAMIRVRNESTSLIHTYFQDRQFQHVHTPLITASDCEGGGEQFAISTPVN 235

Query: 188 Q----------------GSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                              F+  P       Q +  + AS   R +   P FR E   + 
Sbjct: 236 HPNNNKENNKATTTPAVNHFFGEPAYLTVSGQLEAEIFASSHSRVYTFGPSFRAEKSNTT 295

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG--NTVSNNFLR 276
           R   EF+ ++ EMSF+   D L+  E+ L+   +          EF N    T++N F+R
Sbjct: 296 RHLSEFWMVEPEMSFINMQDNLDIAEDFLKYTIQHLMTNCKDDMEFFNKLEKTLTNRFVR 355

Query: 277 ICYDDAI 283
           + Y +AI
Sbjct: 356 LPYTEAI 362



 Score = 44.3 bits (103), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G IR    + +++  + + + ++V    +G      + G  PHGG   G +R +  
Sbjct: 435 ELIGGSIREERYDHLVKRLNKLDMDQDV----YGWYMDLRKYGSAPHGGFGLGFERFLQY 490

Query: 550 LLGAKNVREVSLFPMSQNFC 569
           + G +N+R+V   P  QN+C
Sbjct: 491 VTGLQNIRDVIPIPRHQNYC 510


>gi|224369336|ref|YP_002603500.1| LysS1 [Desulfobacterium autotrophicum HRM2]
 gi|223692053|gb|ACN15336.1| LysS1 [Desulfobacterium autotrophicum HRM2]
          Length = 504

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 117/266 (43%), Gaps = 21/266 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVR-SE 68
           G+ + G    ++G +  V   G   F+  +D  G  Q     +      +++ K +   +
Sbjct: 61  GLGENGPVFSVAGRMMAVNKFGKSSFIRFKDRTGQIQAYLQKNRVGDGVYDLFKKLDIGD 120

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFK 127
           +V     L  +R          TG+  L A+   +LS +   PLP  F   + PE  R++
Sbjct: 121 FVGITGSLFQTR----------TGEWTLLAENFRLLSKSMR-PLPEKFHGIKDPEK-RYR 168

Query: 128 YRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            R+LDL  +   + I  +R++ I  MR      +F+E  TP++   +  GA      +  
Sbjct: 169 QRYLDLIMNKEARAIFTRRSKTIRLMRTFFEQRDFMEVETPMMQPVAG-GAEATPFKTWH 227

Query: 187 NQ-GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           N  G    L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   ++  
Sbjct: 228 NALGMELFLRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMVEFYQAYAT 286

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS 271
            +D+++  E + R +  E +   T+ 
Sbjct: 287 YEDLMDMTEVMFRHLALEVTGSETIQ 312



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 27/42 (64%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           A + GMPP  G   GIDR++MLL  + ++REV LFP  +N  
Sbjct: 463 ALEYGMPPTAGEGIGIDRLIMLLTDSASIREVILFPHMKNIV 504


>gi|15674679|ref|NP_268853.1| lysyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71910308|ref|YP_281858.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|39932234|sp|Q9A0V7|SYK_STRP1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|13621797|gb|AAK33574.1| putative lysyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71853090|gb|AAZ51113.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 497

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    DS     +EI K       + ++G VM 
Sbjct: 65  VAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKKADLGDFIGVEGEVMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A K+  LS +   PLP  F      E+I ++ R LDL   R+
Sbjct: 125 TD---------MGELSIKATKLTHLSKSLR-PLPEKFHGLTDIETI-YRKRHLDLISNRE 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R+++I+ +R  +   +F+E  TP+L   +   A    V     Q     L  
Sbjct: 174 SFDR-FVTRSKMISEIRRYLDGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI+N  E +
Sbjct: 233 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADYLDIMNLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|254524734|ref|ZP_05136789.1| asparaginyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219722325|gb|EED40850.1| asparaginyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 464

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 107/275 (38%), Gaps = 40/275 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  VR    + F+++ D   +   QVVAN   A F+  K + S   +   G
Sbjct: 17  GGEVTVRGWVRTVRGSANLAFVNVSDGSCFAPIQVVANDSLANFDEIKRLTSGCSVIATG 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
            ++    +        GQ  E+ A  +E++   E+ L  P+   +  P S  F      L
Sbjct: 77  TLVKSQGK--------GQSFEIQASALEVVGWVEDPLTYPI---QPKPMSPEFLREVAHL 125

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R R  L   + +    +     R   EN F   STPI+T S  EGA       RV+    
Sbjct: 126 RPRTNLFGAVTRIRNCLAQAVHRFFHENGFNWISTPIITTSDAEGAGQMF---RVSTLDM 182

Query: 192 YALPQAPQQY----------KQLLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
             LP+  +            +  L  SG            + +   P FR E+  + R  
Sbjct: 183 VNLPRDEKGAIDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHL 242

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
            EF+ ++ E++F +  +     E  L+ +F    N
Sbjct: 243 AEFWMIEPEIAFADLAEDARLAEEFLKYLFRAVLN 277


>gi|294656044|ref|XP_002770214.1| DEHA2C13750p [Debaryomyces hansenii CBS767]
 gi|199430811|emb|CAR65577.1| DEHA2C13750p [Debaryomyces hansenii]
          Length = 508

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 127/288 (44%), Gaps = 56/288 (19%)

Query: 8   SCGDLGVS--DVGSFVRLSGWVHRVRPHGGIIFLDIRD---HYGITQVVANPDSACFEIA 62
           +  DL +S   + S +   G +  +R    I F+D+ D    + ++ V+ +P+S   E+ 
Sbjct: 30  TIKDLFISPPSIESTISTQGHIKSIRQFKNIGFIDLSDGTTFHNLSVVLQDPESTLSELH 89

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELS--AQKIEIL--SVAEELPLPVFGER 118
             V                 ++IN   + G+   S   QK E+L    A +  L V G+ 
Sbjct: 90  LKV----------------GQSIN---VAGKWIASKGTQKYELLYNPEANDHNLQVIGDV 130

Query: 119 EYPESIRFK---YRFL----DLRRDTLHKNIVKRTRIINSMRCRMI----AENFIECSTP 167
           E    I+ K   Y+FL     LR  T   ++    R  + M  +++    ++NF + + P
Sbjct: 131 EDAYPIQKKSQTYQFLRGLPTLRHRT--ASLASMLRFRSFMETKLMEFFNSQNFTKTTPP 188

Query: 168 ILTASSPEGA-----------RDFLVPSRVNQGSFYALPQAPQQYKQL---LMASGFDRY 213
           ++T+S  EGA           ++ +V   V +  F+  P       QL   ++    +R 
Sbjct: 189 LITSSDCEGAGEQFKVEQLHKKEVVVDGAVQEEHFFGKPAFLTVSTQLHLEVLTLSLNRA 248

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGV 260
           + + PCFR ED  ++R   EF+ L+ E+ +++    + +  E+++R V
Sbjct: 249 WTLTPCFRAEDSNTNRHLSEFWMLEAEICYIDHVSQLTDFTEDMIRYV 296


>gi|291320251|ref|YP_003515512.1| asparaginyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752583|emb|CBH40555.1| Asparaginyl tRNA synthetase [Mycoplasma agalactiae]
          Length = 452

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 117/276 (42%), Gaps = 28/276 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIAKSVRSEWVLCIDG-LV 77
           V L GWV   R +  I FL I D   +  + A    D   F++   VR    + + G +V
Sbjct: 21  VVLRGWVVSNRGNNKIRFLTISDGSTVESIQATLKGDEFDFKLLDEVRIGAAVQVYGKIV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           ++  A+          +E+ A K  +L   +    P+  +    E++R       LR  T
Sbjct: 81  LTPKAKQ--------PLEILASKFVLLKNVDH-DFPIQKQEINLETLR---EIPHLRHRT 128

Query: 138 LHKNIVKRTRIINSMRC----RMIAEN-FIECSTPILTASSPEGA-RDFLVPSRVNQGSF 191
              N+++   +I S       +  AEN F+  S PI+T++  EGA   F V     +  F
Sbjct: 129 ---NLLRCVMLIRSTLALEIHKFFAENGFLNFSAPIITSNDGEGAGEQFYVNDGNKKQPF 185

Query: 192 YALPQAPQQYKQLLMAS----GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           +    A       L A     GF++ +  AP FR E   + +   EF+ ++ E++F +  
Sbjct: 186 FGNNNATLGVTGQLHAESYAIGFEKVYTFAPTFRAEHSNTKKHAAEFWMIEPEVAFYDLK 245

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
            ++N    +L+ V +   N +     +L+   D ++
Sbjct: 246 KVINLAAKLLKSVIKNTINKHLREFEYLQNNVDSSL 281


>gi|114330878|ref|YP_747100.1| lysyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|114307892|gb|ABI59135.1| lysyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 532

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 113/243 (46%), Gaps = 13/243 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  I+D  G  Q+  + D       ++ R   +  I G     
Sbjct: 96  VKVAGRMLFKRVMGKASFATIQDMSGRIQLYISNDHTGESAHEAFRHYDLGDILG----- 150

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
            AE I     T ++ L   ++ +L+ +   PLP        +  +++ R+LDL   +   
Sbjct: 151 -AEGILFKTRTDELSLRVTRLRLLTKSLR-PLPEKFHGLIDQEQKYRRRYLDLITNEETR 208

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           K  + R++II ++R  ++   ++E  TP++  S P GA  R F+        S Y L  A
Sbjct: 209 KVFLVRSKIIQAVREFLVNRGYLEVETPMM-HSIPGGATARPFITHHNALDMSLY-LRIA 266

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  G ++ F+I   FR+E   +   P EF  L+   ++ +   +++  E++L
Sbjct: 267 PELYLKRLVVGGMEKVFEINRNFRNEGISTRHNP-EFTMLEFYEAYQDHHYLMDLTESML 325

Query: 258 RGV 260
           R V
Sbjct: 326 REV 328



 Score = 43.9 bits (102), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASG-----GIRNHMSEVMLQAFSNVGISKEVVENRFGGLY-RAFQCGMP 534
           +++L   G EIA+G        +  S  + QA +      E +   +   Y +A + G+P
Sbjct: 440 RFELYIAGREIANGFSELNDPEDQASRFLEQARAKEAGDMEAMH--YDADYIQALEYGLP 497

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 498 PTAGEGIGIDRLVMLLTDSPSIRDVILFP 526


>gi|224531928|ref|ZP_03672560.1| asparaginyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511393|gb|EEF81799.1| asparaginyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 462

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 106/262 (40%), Gaps = 28/262 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF--EIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F  +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTTRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGASIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTYSFNVIGDTDPKTYPLQKKRHTFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----- 187
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKPN 185

Query: 188 --------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NSLSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLR 258
           ++ EM+F + +D +   EN+L+
Sbjct: 246 IEPEMAFYKLNDNIILAENLLK 267


>gi|308066909|ref|YP_003868514.1| lysyl-tRNA synthetase (lysine--tRNA ligase) [Paenibacillus polymyxa
           E681]
 gi|305856188|gb|ADM67976.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) [Paenibacillus polymyxa
           E681]
          Length = 506

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 111/245 (45%), Gaps = 11/245 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  I+D  G  Q+    D+      K+     +L +  +V   
Sbjct: 71  VSIAGRIMAKRVMGKASFAHIQDLSGRIQIYVRQDTVPESKYKAF---GILDLGDIV--- 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLH 139
             + +     TG+  +    IE+LS +   PLP          +R++ R++DL  +  + 
Sbjct: 125 GVKGVLFKTKTGETTIKVLDIEVLSKSL-YPLPEKYHGLKDVELRYRQRYVDLVMNPEVQ 183

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAP 198
           K  + R+RII SMR  + +  ++E  TP L + +    A+ F+          Y +  A 
Sbjct: 184 KTFITRSRIIQSMRRYLDSLGYLEVETPTLHSIAGGAAAKPFITHHNALDMQLY-MRIAI 242

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+  G ++ ++I   +R+E   +   P EF  +++  ++ +  DI+   EN++ 
Sbjct: 243 ELHLKRLIVGGMEKVYEIGRVYRNEGISTRHNP-EFTMIELYEAYADYKDIMQLTENMVA 301

Query: 259 GVFEE 263
            + +E
Sbjct: 302 HIAQE 306



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/41 (56%), Positives = 30/41 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           RA + GMPP GG+  GIDR+VMLL  A ++R+V LFP  +N
Sbjct: 464 RALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPHMRN 504


>gi|292487848|ref|YP_003530723.1| asparaginyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899075|ref|YP_003538444.1| asparaginyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291198923|emb|CBJ46033.1| asparaginyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553270|emb|CBA20315.1| asparaginyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|312171970|emb|CBX80227.1| asparaginyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 466

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 109/280 (38%), Gaps = 46/280 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G   V S V + GWV R R          RD       +A  D +CF+  ++V +  +  
Sbjct: 12  GRVTVDSEVTVRGWV-RTR----------RDSKAGISFIAVYDGSCFDPVQAVVNNSLNN 60

Query: 73  IDGLVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESI 124
               V+  +  T  + +ITG++  S    Q  EI +   E+   V     YP      SI
Sbjct: 61  YQNEVLRLT--TGCSVVITGKVVASPGQGQSFEIQATEVEVVGWVDDPDTYPMAAKRHSI 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +   
Sbjct: 119 EYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF- 177

Query: 183 PSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRD 222
             RV+      LP+ P+                    Q      AS   + +   P FR 
Sbjct: 178 --RVSTLDMENLPRTPEGKVNYDEDFFGKEAFLTVSGQLNGETYASAVSKIYTFGPTFRA 235

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E+  + R   EF+ L+ EM+F + +D     E +L+  F+
Sbjct: 236 ENSHTSRHLAEFWMLEPEMAFADLEDNAALAEAMLKYAFK 275



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    EV+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLEVLDARLAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIAFPRT 460


>gi|262365024|gb|ACY61581.1| asparaginyl-tRNA synthetase [Yersinia pestis D182038]
          Length = 466

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 117/302 (38%), Gaps = 43/302 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV------- 65
           G + VGS V + GWV R R          RD       VA  D +CF+  ++V       
Sbjct: 12  GRAAVGSEVTVRGWV-RTR----------RDSKAGISFVAVYDGSCFDPLQAVVNNTLPN 60

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILS-VAEELPLPVFGEREYPES 123
             + VL +          T+ A+   GQ  E+ A  I ++  V +    P+  +R    S
Sbjct: 61  YQDEVLHLTTGCSVEVTGTVVASPGEGQSFEIQATAINVVGWVDDPDTYPMAAKRH---S 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181
           I +      LR  T     V R R  +     R   EN +   STP++TAS  EGA +  
Sbjct: 118 IEYLREVAHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMF 177

Query: 182 VPS--------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             S        R + G+      F+   A      Q      A    + +   P FR E+
Sbjct: 178 RVSTLDLENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD-DAI 283
             + R   EF+ ++ E++F   DD+    E +L+ VF+   N       F     D DA+
Sbjct: 238 SNTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNARADDMKFFAERVDKDAV 297

Query: 284 RR 285
            R
Sbjct: 298 DR 299



 Score = 37.0 bits (84), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLISYVTGVQNVRDVIPFPRT 460


>gi|259505915|ref|ZP_05748817.1| lysine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|259166495|gb|EEW51049.1| lysine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 509

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 12/221 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G V  +R  G + F  I++  G T V A    A   + +   + W   +D G ++S
Sbjct: 63  VAIAGRVMFIRNTGKLCFAVIQEGNGTT-VQAMLSLAA--VGEEALAGWKADVDLGDIVS 119

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138
                I +    G++ + A    + S +   PLPV    +  E  R ++R+ DL  R+  
Sbjct: 120 VRGRVIASK--RGELSVMADSWHMASKSLR-PLPV-AFADMSEDTRVRHRYTDLIMREQA 175

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
             N + R +++ ++R  +  E+F+E  TP+L T      AR F+  S       Y L  A
Sbjct: 176 RTNALTRIKVMRALRKYLEGEDFLEVETPMLQTLHGGAAARPFVTHSNAFDLDLY-LRIA 234

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           P+ + +  +  G +R F++   FR+E   S   P EF  L+
Sbjct: 235 PELFLKRCVVGGMERVFEVNRNFRNEGADSTHSP-EFSMLE 274



 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        I+    E   +  +       V++  F     A + GM
Sbjct: 416 KWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMVLDEDF---LAAMEQGM 472

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   GIDR++M L G   +RE  LFP+
Sbjct: 473 PPTAGCGMGIDRLLMALTGL-GIRETVLFPL 502


>gi|153809093|ref|ZP_01961761.1| hypothetical protein BACCAC_03403 [Bacteroides caccae ATCC 43185]
 gi|149128426|gb|EDM19645.1| hypothetical protein BACCAC_03403 [Bacteroides caccae ATCC 43185]
          Length = 467

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 123/323 (38%), Gaps = 55/323 (17%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L  +D+G+ V + GWV   R    + F+ + D   I  +    D A F+    
Sbjct: 6   RTKIVDLLKRTDIGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNLQVVVDLANFD---- 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPES 123
                 L   G  +S + E + +     ++E+ A++IE+L   +   PL   G      S
Sbjct: 62  -EEMLKLITTGACISVNGEMVESVGSGQKVEVQAREIEVLGTCDNTYPLQKKGH-----S 115

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL 181
           + F      LR  T     V R R   ++       +  F    TPI+TAS  EGA    
Sbjct: 116 MEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHDRGFFYFHTPIITASDCEGAGQMF 175

Query: 182 VPSRVN--------QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDED 224
             + +N        +GS      F+    +     QL   L A+     +   P FR E+
Sbjct: 176 QVTTMNLYDLKKDERGSISYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRAEN 235

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL-----------------------RGVF 261
             + R   EF+ ++ E++F +  D ++  E  +                       +G+ 
Sbjct: 236 SNTPRHLAEFWMIEPEVAFNDIADNMDLAEEFIKYCVKWALDNCADDVKFLNDMFDKGLI 295

Query: 262 EEFSNGNTVSNNFLRICYDDAIR 284
           E       + +NF+R+ Y D I+
Sbjct: 296 ERLQ--GVLKDNFVRLPYTDGIK 316


>gi|119470316|ref|ZP_01613075.1| asparaginyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119446488|gb|EAW27763.1| asparaginyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 465

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 109/275 (39%), Gaps = 45/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL + D             +CF+  ++V    +   D 
Sbjct: 16  VDSQVTIKGWIRTRRDSKAGISFLAVHD------------GSCFDPIQAVVPNSLNNYDE 63

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +    +  +++   +  Q     Q  EI    +   + V G  E P+S     +   +  
Sbjct: 64  VTSLTAGCSVSVTGVLVQSAGKGQSFEI----QANTVTVLGWVENPDSYPMSAKRHSIEY 119

Query: 136 DTLHKNIVKRTRIINSM----RCRMIA-------ENFIECSTPILTASSPEGARDFLVPS 184
              H ++  RT +I ++     C   A       + +   STPI+TAS  EGA +    S
Sbjct: 120 LREHAHLRPRTNMIGAVTRVRNCLAQAIHRFYHEQGYYWISTPIITASDCEGAGEMFRVS 179

Query: 185 --------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
                   R ++G       F+   A      Q      AS   + +   P FR E+  +
Sbjct: 180 TLDMQNLPRTDKGDVDYSEDFFGKEAFLTVSGQLNGETYASAMSKIYTFGPTFRAENSNT 239

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + +DI    EN+L+ VF+
Sbjct: 240 SRHLAEFWMVEPEVAFADLEDIAKLAENMLKYVFK 274



 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 7/86 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF-QCGMPPHGGIA 540
           D+V  G  EI  G  R    +V+      +G++KE         YR   + G  PH G  
Sbjct: 380 DVVAPGIGEIIGGSQREERLDVLDARLEEMGLNKEDY-----SWYRDLRKYGSVPHSGFG 434

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G +R+V  + G  NVR+V  FP ++
Sbjct: 435 LGFERLVAYVTGMGNVRDVIAFPRTK 460


>gi|67922046|ref|ZP_00515562.1| Asparaginyl-tRNA synthetase, class IIb [Crocosphaera watsonii WH
           8501]
 gi|67856262|gb|EAM51505.1| Asparaginyl-tRNA synthetase, class IIb [Crocosphaera watsonii WH
           8501]
          Length = 463

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/301 (20%), Positives = 112/301 (37%), Gaps = 43/301 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + GWV   R      F+++ D   +  +    D +  +    ++    L   G  +  
Sbjct: 19  VTIQGWVRTKRELKDFSFMEVNDGSSLNSLQVVLDESVPDYQDVLK----LLNTGSSVEV 74

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           S   + +     +IEL A  +++   ++    P+  +R   E +R     L  R +T+  
Sbjct: 75  SGTLVQSLGKGQKIELKAATVQVYGTSDPETYPLQKKRHSFEFLR-TIGHLRSRTNTIGA 133

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
            +  R     ++       +F+   TPI+TAS  EGA +    +  +        Q    
Sbjct: 134 VMRVRNACATAIHNFFQERDFMWVHTPIITASDCEGAGELFTVTNFDLSKIPVDKQEKID 193

Query: 201 YKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           Y Q                  +MA  F   +   P FR E+  + R   EF+ ++ EM+F
Sbjct: 194 YSQDFFGKQAYLTVSGQLEAEVMAMSFQNVYTFGPTFRAENSNTSRHLAEFWMVEPEMAF 253

Query: 244 VEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRICYDDA 282
            + +   +  E  L+ +F+          EF N            N ++N F RI Y  A
Sbjct: 254 CDIEGDQDLAEEFLKYIFKYVLETCPEDMEFFNKRIDKSVLETADNIINNEFERITYTKA 313

Query: 283 I 283
           I
Sbjct: 314 I 314


>gi|332826946|gb|EGJ99743.1| lysyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 575

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 33/223 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F++++D  G  QV  + D  C     E+  +V  + +     +
Sbjct: 55  VTIAGRIMGRRIMGKASFVELQDAEGRIQVYISRDDLCPTEDKELYNTVFKKLLDIGDFI 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPES 123
            I G V              G+I + A+++ +L  +   PLPV   ++         PE 
Sbjct: 115 GIKGFVFRTQ---------MGEISVHAEELTVLGKSLR-PLPVVKVKDGVTYDGFTDPEQ 164

Query: 124 IRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDF 180
            R++ R++DL   + +    +KRT++ NSMR  +    +IE  TP+L  S P G  AR F
Sbjct: 165 -RYRQRYVDLIVNEGVKDTFIKRTKVFNSMREFLNGHGYIEVDTPVL-QSIPGGATARPF 222

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           +          Y L  A + Y + L+  GFD  ++ +  FR+E
Sbjct: 223 ITHHNALDIPLY-LRIANELYLKRLIVGGFDGVYEFSRNFRNE 264



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  GI  G+DR+VM + G ++++EV  FP
Sbjct: 460 RALEYGMPPTSGIGIGMDRLVMFMTGQESIQEVMFFP 496


>gi|325283337|ref|YP_004255878.1| Lysyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324315146|gb|ADY26261.1| Lysyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 524

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 29/256 (11%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           L+G +  +R  G   F +++D +G  QV  +  D   F   K +    ++ + G      
Sbjct: 79  LAGRITLLRHMGKAAFAELQDEWGSLQVFFSKSDLESFAATKKIDLGDIIGVKGYPFVTK 138

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFKYRFLDL-----RR 135
                    TGQ+ L   + + L V    PLP  FG  +  E +R + R+LDL     RR
Sbjct: 139 ---------TGQLTLHVTEWQPL-VKSLHPLPTKFGGLQ-DEELRARRRYLDLIVNPERR 187

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF---Y 192
           +        R++ I  +R  + ++ F+E   P L  + P G      P + +  +    +
Sbjct: 188 EAFRT----RSQAIRYIRNFLDSQGFMEVEGPTLQ-TVPGGTE--ATPFQTHHKALSHDF 240

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           +L  + + Y + L+  GF+R ++I   +R+E       P EF  L+   ++ + +D++  
Sbjct: 241 SLRISLELYLKRLLVGGFERVYEIGRNYRNEGIDRTHNP-EFTMLEAYFAYGDYNDMMEL 299

Query: 253 MENVLRGVFEEFSNGN 268
           +E +L G+ +E + G+
Sbjct: 300 VERMLNGLVKEVTGGS 315



 Score = 44.3 bits (103), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  G+DR+ MLL  + ++R+V LFP+
Sbjct: 468 ALEYGMPPTAGMGMGMDRLAMLLTDSDSIRDVLLFPL 504


>gi|259156631|gb|ACV96574.1| lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Vibrio
           fluvialis Ind1]
          Length = 287

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 84/157 (53%), Gaps = 7/157 (4%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150
           G + ++ ++ ++L+ A   PLP        + +R++ R++DL  +   +N  + R+++++
Sbjct: 133 GDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMS 191

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++R  MI++ F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 192 AIRNFMISKQFMEVETPMMHVI-PGGASARPFITHHNALDMPMY-LRIAPELYLKRLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           GFDR F+I   FR+E   S R   EF  ++  M++ +
Sbjct: 250 GFDRVFEINRNFRNEG-LSPRHNPEFTMMEFYMAYAD 285


>gi|154292327|ref|XP_001546739.1| hypothetical protein BC1G_14618 [Botryotinia fuckeliana B05.10]
 gi|150846194|gb|EDN21387.1| hypothetical protein BC1G_14618 [Botryotinia fuckeliana B05.10]
          Length = 460

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 61/111 (54%), Gaps = 12/111 (10%)

Query: 160 NFIECSTPILTASSPEGARD-FLVPS-------RVNQGSFYALPQAPQQYKQL---LMAS 208
           ++++   PI+T+S  EGA + F V S       + + G+F+  P+      QL    +A 
Sbjct: 123 DYVQTHPPIITSSDCEGAGEVFEVGSAHKGPVGKADDGTFFRSPKYLTVSSQLHLEALAQ 182

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLR 258
              R + ++P FR E   + R   EFY L+ E SFVE+ D++++ +EN+LR
Sbjct: 183 SVGRVWALSPTFRAEKSDTPRHLSEFYMLEAECSFVEKMDEVMDLVENMLR 233



 Score = 43.9 bits (102), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 5/97 (5%)

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNH-MSEVMLQAFSNVGISKEVVENRFGGL--YR 527
           G  L +++ F   LV    EI  G +R + + E++    +N  +  +  E   G L  Y 
Sbjct: 350 GGTLETVQCFDL-LVPEACEIVGGSMREYRLPELISAMRANGMVRGDAGEEELGSLKWYT 408

Query: 528 AFQ-CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             +  G  PHGG   G DR++  L G +N+RE+  FP
Sbjct: 409 ELRRWGSVPHGGFGLGFDRLLGYLSGVQNIREIVAFP 445


>gi|293399907|ref|ZP_06644053.1| lysine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306307|gb|EFE47550.1| lysine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 493

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 23/270 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACF 59
           R     C    + +    V+++G +   R  G   F+ I+D  G  Q+    D      +
Sbjct: 40  RAEYEGCTKEELEEKNVTVKVAGRIMTKRRQGKAGFMHIQDVDGQIQIYVRKDVIGEEAY 99

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER 118
           E+ K      ++ I+G VM  +          G++ + A+    L+ A   LP    G +
Sbjct: 100 EVFKKSDLGDIVGIEGKVMKTNH---------GELSVKAEVYTHLTKALRPLPEKFHGLQ 150

Query: 119 EYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
           +  E  RF+ R++DL  +   K I V R RII +++  +  +  +E  TP+L        
Sbjct: 151 DKEE--RFRRRYVDLIMNEESKRIAVTRPRIIRAIQRYLDGKGLMEVETPVLQPILGGAA 208

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+         FY L  A +   + L+  G +  ++I   FR+E   +   P EF  
Sbjct: 209 ARPFITHHNTLDMPFY-LRIATELPLKRLIVGGLEGVYEIGRLFRNEGMDATHNP-EFTT 266

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           ++  +++ +    LN M +++ G+F+  +N
Sbjct: 267 VEAYVAYSD----LNGMMDLIEGLFDYVAN 292



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 27/40 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG+  GIDR VMLL G   +REV LFP  +N
Sbjct: 453 ALEYGLPPTGGVGLGIDRFVMLLTGQTTIREVLLFPHMKN 492


>gi|119616025|gb|EAW95619.1| lysyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
          Length = 441

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 9/184 (4%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           G++ +   +I +LS     LP   FG ++  +  R++ R+LDL   D + +  + R++II
Sbjct: 38  GELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDLILNDFVRQKFIIRSKII 95

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
             +R  +    F+E  TP++    P GA  + F+        + Y +  AP+ Y ++L+ 
Sbjct: 96  TYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMNLY-MRIAPELYHKMLVV 153

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ G+ +  +  
Sbjct: 154 GGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGS 212

Query: 268 NTVS 271
             V+
Sbjct: 213 YKVT 216



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 380 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 415


>gi|71903140|ref|YP_279943.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|71802235|gb|AAX71588.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 501

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    DS     +EI K       + ++G VM 
Sbjct: 69  VAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKKADLGDFIGVEGEVMR 128

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A K+  LS +   PLP  F      E+I ++ R LDL   R+
Sbjct: 129 TD---------MGELSIKATKLTHLSKSLR-PLPEKFHGLTDIETI-YRKRHLDLISNRE 177

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R+++I+ +R  +   +F+E  TP+L   +   A    V     Q     L  
Sbjct: 178 SFDR-FVTRSKMISEIRRYLDGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRI 236

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI+N  E +
Sbjct: 237 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADYLDIMNLTEGI 295

Query: 257 LR 258
           ++
Sbjct: 296 IQ 297



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 435 LSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVL 494

Query: 561 LFP 563
           LFP
Sbjct: 495 LFP 497


>gi|320526935|ref|ZP_08028124.1| asparaginyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132520|gb|EFW25061.1| asparaginyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 462

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 107/261 (40%), Gaps = 35/261 (13%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPD--SACFEIAKSVRSEWVL 71
           D   F++L GWV   R    + F+ + D   +   Q+V + D  S   E AK +    + 
Sbjct: 23  DQLDFIQLQGWVRTNRAGKNVSFIALNDGTFFKNAQIVYSSDTLSNYAEAAKYLTGTAIS 82

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-ESIRFKYRF 130
            +   +++  A               +Q  EI   A E+ L    +  YP +  R  + +
Sbjct: 83  VVGKFILTPEA---------------SQPFEIQ--ATEINLEGECDSTYPLQKKRHTFEY 125

Query: 131 L----DLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPS 184
           L     LR  T   + V R R + +M      ++  F+   TPI+T +  EGA +    +
Sbjct: 126 LREIGHLRPRTNTFSAVFRVRSVLAMAIHQFFQDQGFVYVHTPIITGADAEGAGETFTVT 185

Query: 185 RVNQGSF-------YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
               G++       +A      Q +    A  F   +   P FR E+  +     EF+ +
Sbjct: 186 TREDGNYEEDFFGKHASLTVSGQLQAEAYAMAFRDIYTFGPTFRAENSNTTTHAAEFWMI 245

Query: 238 DMEMSFVEQDDILNTMENVLR 258
           + EM+F + D  ++ +E++L+
Sbjct: 246 EPEMAFADLDYSMDVIEDMLK 266


>gi|73956994|ref|XP_861471.1| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 6 [Canis familiaris]
 gi|73956996|ref|XP_861505.1| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 7 [Canis familiaris]
          Length = 441

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 9/184 (4%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           G++ +   +I +LS     LP   FG ++  +  R++ R+LDL   D + +  + R++II
Sbjct: 38  GELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDLILNDFVRQKFIIRSKII 95

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
             +R  +    F+E  TP++    P GA  + F+        + Y +  AP+ Y ++L+ 
Sbjct: 96  TYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMNLY-MRIAPELYHKILVV 153

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ G+ +  +  
Sbjct: 154 GGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMISGMVKHITGS 212

Query: 268 NTVS 271
             V+
Sbjct: 213 YKVT 216



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 380 ALEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFP 415


>gi|238061433|ref|ZP_04606142.1| lysyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237883244|gb|EEP72072.1| lysyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 502

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 14/246 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEWVLCID- 74
            G  V ++G V  VR  G + F  +RD  G   Q + + D     +      +W   +D 
Sbjct: 63  TGDRVSVTGRVIFVRNTGKLCFATLRDGDGTELQAMLSLD----RVGAERLDDWKRLVDL 118

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G  +  + E I +    G++ + A+   + + A   PLPV   +   E  R + R++DL 
Sbjct: 119 GDHVGVTGEVITSR--RGELSVLAEAWAVTAKALR-PLPV-AHKPLSEEARVRQRYVDLI 174

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            R    + +  R   + S+R  +  + F+E  TP+L        AR F+  S       Y
Sbjct: 175 VRPQARQMVRTRAAAVRSLRDCLHGQGFVEVETPMLQLLHGGAAARPFVTHSNALNTDLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ + +  +  G DR F+I   FR+E   S   P EF  L+   ++ + D + + 
Sbjct: 235 -LRIAPELFLKRAVVGGVDRVFEINRNFRNEGVDSSHSP-EFAMLEAYQAYGDYDTMASL 292

Query: 253 MENVLR 258
             N+++
Sbjct: 293 TRNLVQ 298



 Score = 43.9 bits (102), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP GG+  GIDR++M L G   +RE  LFP+
Sbjct: 462 RAMEYGMPPAGGMGMGIDRLLMALTGL-GIRETILFPL 498


>gi|194366365|ref|YP_002028975.1| asparaginyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194349169|gb|ACF52292.1| asparaginyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 464

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 107/275 (38%), Gaps = 40/275 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  VR    + F+++ D   +   QVVA    A F+  K + +   L   G
Sbjct: 17  GGEVTVRGWVRTVRGSANLAFVNVTDGSCFAPIQVVAGDALANFDEIKRLTTGCSLVATG 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
            ++    +        GQ  E+ A  +E++   E+ L  P+  +   PE +R       L
Sbjct: 77  TLVKSQGK--------GQSFEIQASAVEVVGWVEDPLTYPIQPKPMTPEFLR---EVAHL 125

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R R  L   + +    +     R   EN F   STPI+T S  EGA       RV+    
Sbjct: 126 RPRTNLFGAVTRIRNCLAQAVHRFFHENGFNWISTPIITTSDAEGAGQMF---RVSTLDM 182

Query: 192 YALPQAPQQ----------YKQLLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
             LP+  Q            +  L  SG            + +   P FR E+  + R  
Sbjct: 183 VNLPRDAQGGIDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHL 242

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
            EF+ ++ E++F +  +     E  L+ +F    N
Sbjct: 243 AEFWMIEPEIAFADLAEDARLAEEFLKYLFRAVLN 277


>gi|62185412|ref|YP_220197.1| lysyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312438|sp|Q5L545|SYK_CHLAB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|62148479|emb|CAH64249.1| putative lysyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 526

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 19/186 (10%)

Query: 125 RFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV 182
           R++ R+LDL   D + +  +KR+RII  +R  M A+ FIE  TPIL        A  F+ 
Sbjct: 174 RYRKRWLDLIASDEVRQTFLKRSRIIKLIRHYMDAQGFIEVETPILQNVYGGAEATPFIT 233

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    + L  +P+   + ++  G  R ++I   FR+E       P EF  ++   +
Sbjct: 234 MLNALHSEVF-LRISPEISLKKILVGGTPRIYEIGKVFRNEGIDRTHNP-EFTIIEAYAT 291

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNT-----------VSNNF----LRICYDDAIRRYG 287
            ++   ++  +EN++  +  E ++G+T           VS +F    +R+   D+I+ YG
Sbjct: 292 NIDYHSVMTYVENLVEHLVCELNDGSTVLTYTHLKQGPVSIDFKAPWIRMTMKDSIKTYG 351

Query: 288 TDKPDL 293
               DL
Sbjct: 352 GVDVDL 357



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 23/32 (71%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP GG   GIDR+VM+L  A ++R+V  FP
Sbjct: 485 GLPPTGGFGIGIDRLVMILTNAASIRDVLYFP 516


>gi|25029089|ref|NP_739143.1| lysyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|23494376|dbj|BAC19343.1| putative lysyl-tRNA synthetase [Corynebacterium efficiens YS-314]
          Length = 536

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 12/221 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G V  +R  G + F  I++  G T V A    A   + +   + W   +D G ++S
Sbjct: 90  VAIAGRVMFIRNTGKLCFAVIQEGNGTT-VQAMLSLAA--VGEEALAGWKADVDLGDIVS 146

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138
                I +    G++ + A    + S +   PLPV    +  E  R ++R+ DL  R+  
Sbjct: 147 VRGRVIASK--RGELSVMADSWHMASKSLR-PLPV-AFADMSEDTRVRHRYTDLIMREQA 202

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
             N + R +++ ++R  +  E+F+E  TP+L T      AR F+  S       Y L  A
Sbjct: 203 RTNALTRIKVMRALRKYLEGEDFLEVETPMLQTLHGGAAARPFVTHSNAFDLDLY-LRIA 261

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           P+ + +  +  G +R F++   FR+E   S   P EF  L+
Sbjct: 262 PELFLKRCVVGGMERVFEVNRNFRNEGADSTHSP-EFSMLE 301



 Score = 41.6 bits (96), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+G        I+    E   +  +       V++  F     A + GM
Sbjct: 443 KWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMVLDEDF---LAAMEQGM 499

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP  G   GIDR++M L G   +RE  LFP+
Sbjct: 500 PPTAGCGMGIDRLLMALTGL-GIRETVLFPL 529


>gi|315126664|ref|YP_004068667.1| asparaginyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015178|gb|ADT68516.1| asparaginyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 465

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 108/275 (39%), Gaps = 45/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL + D             +CF+  ++V    +   D 
Sbjct: 16  VDSQVTIKGWIRTRRDSKAGISFLAVHD------------GSCFDPIQAVVPNSLNNYDE 63

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +    +  +++   +  Q     Q  EI + +    + V G  E P++     +   +  
Sbjct: 64  VTSLTAGCSVSVTGVLVQSAGQGQSFEIQANS----VTVLGWVENPDTYPMSAKRHSIEY 119

Query: 136 DTLHKNIVKRTRIINSM----RCRMIA-------ENFIECSTPILTASSPEGARDFLVPS 184
              H ++  RT +I ++     C   A       + F   STPI+TAS  EGA +    S
Sbjct: 120 LREHAHLRPRTNMIGAVTRVRNCLAQAIHRFYHEQGFYWISTPIITASDCEGAGEMFRVS 179

Query: 185 RVNQGSFYALPQAPQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRS 227
            ++  +     +    Y +                    AS   + +   P FR E+  +
Sbjct: 180 TLDMQNLPMTDKGEIDYSEDFFGKEAFLTVSGQLNGETYASAMSKIYTFGPTFRAENSNT 239

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + +DI    EN+L+ VF+
Sbjct: 240 SRHLAEFWMVEPEVAFADLEDIAKLAENMLKYVFK 274



 Score = 38.9 bits (89), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 7/86 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF-QCGMPPHGGIA 540
           D+V  G  EI  G  R    +V+      +G++KE         YR   + G  PH G  
Sbjct: 380 DVVAPGIGEIIGGSQREERLDVLDARLDEMGLNKEDY-----SWYRDLRKYGSVPHSGFG 434

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G +R+V  + G  NVR+V  FP ++
Sbjct: 435 LGFERLVAYVTGMGNVRDVIAFPRTK 460


>gi|225560710|gb|EEH08991.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 591

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 112/274 (40%), Gaps = 44/274 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC---FEIAKSVRSEWVLCIDG 75
           +R+ G++  VR      F +I D   I   Q +  P+ A       A  +   W  C  G
Sbjct: 61  IRVRGFIRSVRKQKRFAFAEISDGSTIKSVQAILTPEQAARLSTGSAVDISGVWQPCPPG 120

Query: 76  LVMSRSAETINANIITGQIELSAQKIEI------LSVAEELPLPVFGEREYPESIRFKYR 129
              S         I TG+ +     + I      LS  +   LP    + YP  I+ KY 
Sbjct: 121 KEQSHELHATEVKI-TGEADPEVSFVPIPCTACRLSFTDTYTLP--NRQTYP--IQKKYH 175

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAEN---------------FIECSTPILTASSP 174
             D  R   H  +  RT   NS+  R  +E+               F++   P++T+S  
Sbjct: 176 SPDFLRQIPHLRL--RTPF-NSLLSRFRSESIFQLGQVFRFQLGGCFVQVQPPLITSSDC 232

Query: 175 EGARDF--LVPSR----VNQGSFYALPQAPQQYKQLLM---ASGFDRYFQIAPCFRDEDP 225
           EGA +   +VP         G F+  P+      QL +   A+     + ++P FR E  
Sbjct: 233 EGAGEVFTVVPGDKVDGAEVGEFFRSPKYLTVSSQLHLEAYAAELGNVWALSPTFRAEKS 292

Query: 226 RSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLR 258
            + R   EFY L++EM+FV+  D + + +E+++R
Sbjct: 293 DTPRHLSEFYMLEVEMNFVQSVDSLTDIVESLIR 326


>gi|160947517|ref|ZP_02094684.1| hypothetical protein PEPMIC_01451 [Parvimonas micra ATCC 33270]
 gi|158446651|gb|EDP23646.1| hypothetical protein PEPMIC_01451 [Parvimonas micra ATCC 33270]
          Length = 461

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/317 (19%), Positives = 124/317 (39%), Gaps = 49/317 (15%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V ++GW+   R +  I F+++ D   +   Q+V       F+    +     + + G V+
Sbjct: 19  VEVAGWIKNSRFNNNIGFIELNDGTTFRSIQIVVESKLDNFQTISKLLLPSAIIVKGKVV 78

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                  N  I   +I +  +  +          P+  +R   E +R   + L  R +T 
Sbjct: 79  KSLGGKQNFEINASEIVVEGESTD--------KYPLQKKRHTFEFLR-TIQHLRPRANTF 129

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS--------RVNQGS 190
           +     R+ +  ++        F+   TPI+TAS  EGA +    +        R N G 
Sbjct: 130 NAVFRVRSILSYALHKFFFERGFVYAHTPIITASDAEGAGEMFRVTNLDIDNLPRTNNGE 189

Query: 191 ------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 F++ P       QL     A  +   +   P FR E+  + R   EF+ ++ E+
Sbjct: 190 VDFTQDFFSKPTNLTVSGQLEGEAFAMAYRNIYTFGPTFRAENSNTTRHAAEFWMIEPEI 249

Query: 242 SFVEQDDILNTMENVLRGV--------------FEEF-SNG------NTVSNNFLRICYD 280
           +F +  D++   E++++ +              F +F  NG      + V++ F  + Y 
Sbjct: 250 AFADLKDVIKLSEDMVKYIIKFVLENAPDEMKFFNDFIDNGLLERLNSVVNSEFKVMTYT 309

Query: 281 DAIRRYGTDKPDLRNPI 297
           +AI    + K + + P+
Sbjct: 310 EAIEILKSSKENFKYPV 326



 Score = 38.9 bits (89), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 15/95 (15%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAF--SNVGI---SKEVVENRFGGLYRAFQCGMPPH 536
           D++  G  E+  G  R    E++ Q    SN+ I   S  +   RFGG           H
Sbjct: 376 DMLVPGIGELIGGSQREERLEILEQKMKDSNMNIDDYSWYLDLRRFGG---------TKH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG   G +R++M L G +N+R+V  FP +   C+ 
Sbjct: 427 GGYGLGFERMLMYLTGMQNIRDVLPFPRTVGLCEF 461


>gi|37522925|ref|NP_926302.1| lysyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|39932049|sp|Q7NG18|SYK_GLOVI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|35213927|dbj|BAC91297.1| lysyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 497

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 128/277 (46%), Gaps = 29/277 (10%)

Query: 2   HRY-RTHSCGDLGVS--------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           +RY RTH  GDL           +V   V ++G +   R  G + F  ++D  G  Q+  
Sbjct: 27  YRYERTHMAGDLQAKYKDLENGQEVEDAVSVAGRIVARRVLGSVAFFGLQDDSGTIQLYF 86

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINAN-----IITGQIELSAQKIEILSVA 107
           +       I +S+ ++    +D L  + + + I A+        G++ +   + E+L  +
Sbjct: 87  DKKR----IRESMGADAFKWLDKL--TDTGDFIGAHGTIRRTERGELSVYVHEYELLCKS 140

Query: 108 EELPLP--VFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIEC 164
             LPLP   +G  +  +  R++ R+LDL  +  + +   KR  I+  +R  +    F+E 
Sbjct: 141 I-LPLPSEYYGLTDVQK--RYRQRYLDLIANPGVRETFRKRALIVREIRRFLDERGFLEI 197

Query: 165 STPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP+L T +    AR F           + L  A + + + L+  GF++ +++   FR+E
Sbjct: 198 ETPVLQTEAGGAAARPFTTHHNALGLDMF-LRIATELHLKRLVVGGFEKVYELGRIFRNE 256

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
              +   P EF  +++  ++ +  DI++ +E +LR V
Sbjct: 257 GISTRHNP-EFTTVEIYEAYSDYFDIMDLVETLLRAV 292



 Score = 44.3 bits (103), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL  + ++R+V  FP
Sbjct: 454 AIEHGLPPTGGVGIGIDRLVMLLTDSPSIRDVIAFP 489


>gi|117920749|ref|YP_869941.1| asparaginyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166232080|sp|A0KXL6|SYN_SHESA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|117613081|gb|ABK48535.1| asparaginyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 466

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 108/280 (38%), Gaps = 48/280 (17%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    GI FL + D             +CF   + V    + 
Sbjct: 12  GEHAVGSTVTVRGWVRTRRDSKAGISFLAVYD------------GSCFNPIQGVVPNSLE 59

Query: 72  CIDGLVMSRSAETINANIITGQI----------ELSAQKIEILSVAEEL-PLPVFGEREY 120
             D  V+  +A    + I+TG+I          EL    +E+    E+    P+  +R  
Sbjct: 60  NYDNEVLKLTAGC--SVIVTGEIVESPGAGQAYELQVTHVEVTGWVEDPDTYPMAAKRHS 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGAR 178
            E +R       LR  T     V R R  ++    R   EN F+  STP++TAS  EGA 
Sbjct: 118 IEHLR---ELAHLRPRTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAG 174

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFR 221
           +    S ++  +          Y +        L  SG            + +   P FR
Sbjct: 175 EMFRVSTLDMENLPRTSDGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFR 234

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            E+  + R   EF+ ++ E++F    DI +  E +L+  F
Sbjct: 235 AENSNTSRHLAEFWMVEPEVAFATLSDIASLAEGMLKYAF 274


>gi|169351684|ref|ZP_02868622.1| hypothetical protein CLOSPI_02465 [Clostridium spiroforme DSM 1552]
 gi|169291906|gb|EDS74039.1| hypothetical protein CLOSPI_02465 [Clostridium spiroforme DSM 1552]
          Length = 496

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 121/278 (43%), Gaps = 28/278 (10%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLVM 78
           +L+G +   R  G + F+ I+D  G  Q+    D+     +E+ K      ++ + G V 
Sbjct: 61  KLAGRIMTKRRKGKVCFMHIQDREGQIQLYVRKDAIGEDVYELVKKGDIGDIIGVKGTVF 120

Query: 79  SRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
             +         TG+  +  ++   L+ A   LP    G  +  E  R++ R++DL  + 
Sbjct: 121 MTN---------TGECSVKVEEYTHLTKALRPLPEKYHGLTDVEE--RYRRRYVDLIMNE 169

Query: 138 LHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
             + I   R +II S++  +  + ++E  TP+L        AR F+        +FY L 
Sbjct: 170 DARKIAFTRPKIIRSIQHYLDNKGYVEVETPVLNPILGGASARPFVTHHNTLDVNFY-LR 228

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A +   + L+  G D  ++I   FR+E       P EF  +++  +F + + +++  E 
Sbjct: 229 IATELSLKRLIVGGMDAVYEIGRLFRNEGMDRTHNP-EFTTIEVYKAFSDLEGMMDLTEG 287

Query: 256 VLR-------GVFEEFSNGNTVS--NNFLRICYDDAIR 284
           ++        G +E    G+ +S    F RI   DAI+
Sbjct: 288 IISNAANEVCGTYEIEYKGHKISLAPGFKRISMTDAIK 325



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL G ++++EV LFP
Sbjct: 454 ALEYGLPPTGGMGMGIDRLVMLLTGQESIQEVILFP 489


>gi|124026775|ref|YP_001015890.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|123961843|gb|ABM76626.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 513

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 131/312 (41%), Gaps = 45/312 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV------------ANPDSACFEIAKSVRSE 68
           V ++G V   R  G + F  + D  GI Q+              NP +    I   V S 
Sbjct: 60  VSIAGRVTSRRVMGKLAFFTLSDETGIIQLFLEKATLNRNEDSENPKNNFENITSLVDSG 119

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFK 127
             + + G++             T + ELS +  E   +++ L PLP           R++
Sbjct: 120 DWIGVSGILRR-----------TDRGELSIKVFEWSMLSKSLQPLPDKWHGLADVEKRYR 168

Query: 128 YRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSR 185
            R+LDL  +   +   + R  +++S+R  +  ++F+E  TP+L + +    AR F+    
Sbjct: 169 QRYLDLIVNPQSRKTFRTRALLVSSIRRWLDEKDFLEIETPVLQSEAGGADARPFITHHN 228

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  A + + + L+  GF R +++   FR+E   +   P EF  +++  +F +
Sbjct: 229 TLDLPLY-LRIATELHLKRLVVGGFQRVYELGRIFRNEGISTRHNP-EFTSVEIYEAFAD 286

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNV 302
             D+++  E +L  V E             +IC    I  Y   + DL+ P     MH++
Sbjct: 287 YFDMMDLTEKLLSSVCE-------------KICGSTKI-NYQEQEIDLQPPWRRATMHDL 332

Query: 303 TEHFVHSEFRVF 314
            + F   +F +F
Sbjct: 333 VKEFTGIDFELF 344



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR VMLL  + ++R+V  FP+
Sbjct: 465 ALEVGMPPTGGLGIGIDRFVMLLTDSPSIRDVIAFPL 501


>gi|73956992|ref|XP_861443.1| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 5 [Canis familiaris]
          Length = 437

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 9/184 (4%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           G++ +   +I +LS     LP   FG ++  +  R++ R+LDL   D + +  + R++II
Sbjct: 34  GELSIIPYEITLLSPCLHMLPHLHFGLKD--KETRYRQRYLDLILNDFVRQKFIIRSKII 91

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
             +R  +    F+E  TP++    P GA  + F+        + Y +  AP+ Y ++L+ 
Sbjct: 92  TYIRSFLDELGFLEIETPMMNII-PGGAVAKPFITYHNELDMNLY-MRIAPELYHKILVV 149

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ G+ +  +  
Sbjct: 150 GGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMISGMVKHITGS 208

Query: 268 NTVS 271
             V+
Sbjct: 209 YKVT 212



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 376 ALEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFP 411


>gi|307565245|ref|ZP_07627739.1| asparagine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307346058|gb|EFN91401.1| asparagine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 463

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 112/274 (40%), Gaps = 32/274 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  ++ G  + + GWV   R    + F+ + D   I   QVV NP S   E  
Sbjct: 3   RTKIVDALSCTNFGKDIVVKGWVRSHRSSKAVDFIALNDGSTIKNIQVVVNPSSIDEETL 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEIL-SVAEELPLPVFGER-E 119
           KS+ +   + + G        T+  ++  GQ  E+  + IE+  +   + P+   G+  E
Sbjct: 63  KSITTGACIGVTG--------TLVESMGKGQTSEVQCKNIEVYGTCPSDYPMQKKGQSFE 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           Y      KY  + LR +T       R  +  ++        F    TP++T S  EGA +
Sbjct: 115 YMR----KYGHMRLRTNTFGAVFRIRHNMAIAIHRYFHEHGFYYFHTPLITGSDAEGAGN 170

Query: 180 FLVPSRVN------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDED 224
               + ++            +  F+          QL   L A+     +   P FR E+
Sbjct: 171 MFQVTTLDLDRIAKSGKVEYEQDFFGKRTHLTVSGQLEGELGATALGAIYTFGPTFRAEN 230

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             + R   EF+ ++ E++F++  ++++  E+ ++
Sbjct: 231 SNTPRHLAEFWMVEPEVAFIDLPELMDLEEDFIK 264



 Score = 40.8 bits (94), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 4/73 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G IR    + +LQ     G+  E    ++       + G  PHGG   G +R+++ 
Sbjct: 386 EIIGGSIREESYDKLLQEIEQRGMKAE----QYSWYLDTRKYGTCPHGGFGLGFERLILF 441

Query: 550 LLGAKNVREVSLF 562
           + G +N+R+V  F
Sbjct: 442 VTGMQNIRDVIPF 454


>gi|304439986|ref|ZP_07399879.1| asparagine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371478|gb|EFM25091.1| asparagine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 460

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 66/317 (20%), Positives = 126/317 (39%), Gaps = 50/317 (15%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V + GW+   R      F+++ D   +   Q+V   +   F E++K   S  +     +V
Sbjct: 19  VTVCGWIKTSRSSKNFGFIELNDGSSFKSLQIVLESNLENFDEVSKYTISSSIEVTGKVV 78

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            S  A+          +EL A++++++ +++    P+  +R   E +R K   L  R +T
Sbjct: 79  ESPGAKQ--------SVELHAKEVKLIGLSDR-DYPLQKKRHTMEYLRTKTH-LRPRTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF------------LVPSR 185
                  R+ I  ++        F+   +PI+TAS  EGA +             +V  +
Sbjct: 129 FKAVFKVRSLIAFAIHKYFQENGFVYVHSPIITASDAEGAGEMFQVTTLDLKDIPMVDGK 188

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQ----IAPCFRDEDPRSDRLPGEFYQLDMEM 241
           V+    +   +        L A  F   F+      P FR E+  + R   EF+ ++ E+
Sbjct: 189 VDYNEDFFGRETHLTVSGQLEAEAFAHAFRDCYTFGPTFRAENSNTARHAAEFWMVEPEL 248

Query: 242 SFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRICYD 280
           SF + + +L  +E  ++ V            EF N            + V  +F ++ Y 
Sbjct: 249 SFCKLEGMLENVEGCIKYVINYVLENAPDEMEFFNQFIDKGLLDRLKSIVEKDFGKVTYT 308

Query: 281 DAIRRYGTDKPDLRNPI 297
           +A+      K D + P+
Sbjct: 309 EAVELLKESKADFKYPV 325



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 15/95 (15%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  G  R H  EV+      +G+  +  E      R+G +  +        
Sbjct: 375 DLLVPGIGELVGGSQREHRPEVLENRMRELGLDVDAYEWYLDLRRYGTVITS-------- 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G   G +R+VM + G KN+R+V  FP + N  D+
Sbjct: 427 -GYGIGFERLVMYITGMKNIRDVIPFPRTVNSADI 460


>gi|72383033|ref|YP_292388.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|72002883|gb|AAZ58685.1| lysyl-tRNA synthetase, class-2 [Prochlorococcus marinus str.
           NATL2A]
          Length = 513

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 131/312 (41%), Gaps = 45/312 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV------------ANPDSACFEIAKSVRSE 68
           V ++G V   R  G + F  + D  GI Q+              NP +    I   V S 
Sbjct: 60  VSIAGRVTSRRVMGKLAFFTLSDETGIIQLFLEKATLNRNEDSENPKNNFENITSLVDSG 119

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFK 127
             + + G++             T + ELS +  E   +++ L PLP           R++
Sbjct: 120 DWIGVSGILRR-----------TDRGELSIKVFEWSMLSKSLQPLPDKWHGLADVEKRYR 168

Query: 128 YRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSR 185
            R+LDL  +   +   + R  +++S+R  +  ++F+E  TP+L + +    AR F+    
Sbjct: 169 QRYLDLIVNPQSRKTFRTRALLVSSIRRWLDEKDFLEIETPVLQSEAGGADARPFITHHN 228

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  A + + + L+  GF R +++   FR+E   +   P EF  +++  +F +
Sbjct: 229 TLDLPLY-LRIATELHLKRLVVGGFQRVYELGRIFRNEGISTRHNP-EFTSVEIYEAFAD 286

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNV 302
             D+++  E +L  V E             +IC    I  Y   + DL+ P     MH++
Sbjct: 287 YFDMMDLTEKLLSSVCE-------------KICGSTKI-NYQEQEIDLQPPWRRATMHDL 332

Query: 303 TEHFVHSEFRVF 314
            + F   +F +F
Sbjct: 333 VKEFTGIDFELF 344



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR VMLL  + ++R+V  FP+
Sbjct: 465 ALEVGMPPTGGLGIGIDRFVMLLTDSPSIRDVIAFPL 501


>gi|26988228|ref|NP_743653.1| lysyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|38258322|sp|Q88MS3|SYK_PSEPK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|24982968|gb|AAN67117.1|AE016340_8 lysyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|313500279|gb|ADR61645.1| LysS [Pseudomonas putida BIRD-1]
          Length = 500

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 137/324 (42%), Gaps = 47/324 (14%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E   +V++ W L   G ++S  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLPEETLAAVKT-WDL---GDIIS--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCR 155
              + +L+ +   PLP           R++ R++DL    +T H   V R+++I+ +R  
Sbjct: 135 MTNVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRV-RSQVISHIRKF 192

Query: 156 MIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           +I  +F+E  TP+L T      A+ F         + + L  AP+ Y + L+  GF++ F
Sbjct: 193 LIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMF-LRIAPELYLKRLVVGGFEKVF 251

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           +I   FR+E   +   P EF  L+   ++ +  D ++  E + R +  +   G+T     
Sbjct: 252 EINRNFRNEGVSTRHNP-EFTMLEFYQAYADYRDNMDLTEELFREL-AQLVLGST----- 304

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
             + Y D +  +G                E FV     VF  IL  NP  E+ A   +  
Sbjct: 305 -DVPYGDKVFHFG----------------EPFVR--LSVFDSILKYNP--ELTAADLQD- 342

Query: 335 GGNRAFCDRMNEWARSQGQPGLAY 358
                  DR  E AR  G   L +
Sbjct: 343 ------VDRAREIARKAGAKVLGH 360



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 458 RALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFP 494


>gi|77360557|ref|YP_340132.1| asparaginyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|123588153|sp|Q3IGU4|SYN_PSEHT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|76875468|emb|CAI86689.1| asparaginyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 465

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 61/279 (21%), Positives = 109/279 (39%), Gaps = 45/279 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   V S V + GW+   R    GI FL + D             +CF+  ++V    + 
Sbjct: 12  GKVSVDSQVTVKGWIRTRRDSKAGISFLAVHD------------GSCFDPIQAVVPNSLN 59

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
             D +    +  +++   +  Q     Q  EI + +    + V G  E P+S     +  
Sbjct: 60  NYDEVTSLTAGCSVSVTGVLVQSAGQGQSYEIQANS----VTVLGWVENPDSYPMAAKRH 115

Query: 132 DLRRDTLHKNIVKRTRIINSM----RCRMIA-------ENFIECSTPILTASSPEGARDF 180
            +     H ++  RT +I ++     C   A       + F+  STPI+TAS  EGA + 
Sbjct: 116 SIEYLREHAHLRPRTNMIGAVTRVRNCLAQAIHRFYHEQGFLWISTPIITASDCEGAGEM 175

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLM-----------------ASGFDRYFQIAPCFRDE 223
              S ++  +     +    Y +                    AS   + +   P FR E
Sbjct: 176 FRVSTLDMQNLPLTDKGEVDYSEDFFGKEAFLTVSGQLNGETYASAMSKIYTFGPTFRAE 235

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           +  + R   EF+ ++ E++F + +DI    E +L+ VF+
Sbjct: 236 NSNTSRHLAEFWMVEPELAFADLEDIAKLAEQMLKYVFK 274



 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 7/86 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF-QCGMPPHGGIA 540
           D+V  G  EI  G  R    +++      +G++K+         YR   + G  PH G  
Sbjct: 380 DIVAPGIGEIIGGSQREERLDILDARLDEMGLNKDDY-----SWYRDLRKYGTVPHSGFG 434

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G +R+V  + G  NVR+V  FP ++
Sbjct: 435 LGFERLVAYVTGMGNVRDVIAFPRTK 460


>gi|320527101|ref|ZP_08028290.1| lysyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132686|gb|EFW25227.1| lysyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 544

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 18/209 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCIDGLV 77
           V ++G + + R  G + F+ + D  G  QVV N        +E+ K+     ++ I G V
Sbjct: 107 VSIAGRIMQKRRMGKLGFIHLLDREGKIQVVINKRIIGDEIYELFKASDLGDIVGIRGTV 166

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RR 135
           +            TG++ + A +   LS A   LP    G ++  E  R++ R++DL   
Sbjct: 167 IKTQ---------TGELSVEAHEYTHLSKALRPLPDKFHGLQDKEE--RYRRRYVDLIMN 215

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
           D   K  + R RI++++R  M ++ ++E  TPIL        AR F+         FY L
Sbjct: 216 DESRKIAILRPRIVSAIRRYMDSQGYLEVETPILQPILGGANARPFITHHNALDKDFY-L 274

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             A +   + L+  G ++ ++I   FR+E
Sbjct: 275 RIATELPLKRLIVGGLEKVYEIGRIFRNE 303



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 28/40 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GGI  GIDR VMLL G  ++R+V LFP  ++
Sbjct: 502 ALEYGLPPTGGIGFGIDRFVMLLTGTDSIRDVLLFPTMKD 541


>gi|121715316|ref|XP_001275267.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Aspergillus
           clavatus NRRL 1]
 gi|119403424|gb|EAW13841.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Aspergillus
           clavatus NRRL 1]
          Length = 574

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 116/284 (40%), Gaps = 27/284 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VHR+R    +IFL + D YG  Q +   +      A ++     + I G +
Sbjct: 149 GTRVRVLGRVHRLRAQKDVIFLTLTDGYGYLQCILTGNLTKTYDALTLTIGTSMAIHGEM 208

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLDL 133
            +   +    N      EL A    ++  A    E +   V  + + P+++ +  R L L
Sbjct: 209 RAVPPKQHAPN----DRELHADFYTVIGRAAGDKEAITTRVAPDAD-PQTL-YDNRHLVL 262

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +T    +  R   + + R        +E + P +  +  EG           + ++  
Sbjct: 263 RGETSSAVLKVRAATLKAFRQTFEEHRMLEVTPPAMVQTQVEGGSTLFKFDYYGEDAY-- 320

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  + S  D  F + P FR E   + R   E+  ++ E+ F+   D+L+ +
Sbjct: 321 LTQSSQLYLETCLPSLGD-VFCVCPSFRAEKSLTRRHLSEYTHIEGELDFITFTDLLDHL 379

Query: 254 ENVLRGVFEEF--------------SNGNTVSNNFLRICYDDAI 283
           ENV+  V E                 +  T S  F R+ Y DAI
Sbjct: 380 ENVICRVIELTLADPATAALIKQLNPDFKTPSRPFRRMRYSDAI 423


>gi|332758055|gb|EGJ88381.1| OB-fold nucleic acid binding domain protein [Shigella flexneri
          K-671]
 gi|333004770|gb|EGK24292.1| OB-fold nucleic acid binding domain protein [Shigella flexneri
          K-218]
          Length = 81

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 23 LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRS 81
          L GWV+R R  G +IF+D+RD  GI QV  +PD A   ++A  +R+E+ + + G V +R 
Sbjct: 3  LCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARD 62

Query: 82 AETINA 87
           + + A
Sbjct: 63 EKILTA 68


>gi|315925854|ref|ZP_07922060.1| lysine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315620818|gb|EFV00793.1| lysine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 491

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 122/274 (44%), Gaps = 21/274 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGL 76
           G  V L+G +   R  G + F D+ D  G  Q+    D    ++  K V    ++ I G 
Sbjct: 54  GQNVSLAGRIMAKRGQGKVGFYDLLDSSGRIQLFLKKDLLPDYDQIKKVDIGDIVGIKGE 113

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRR 135
           +              GQI +      +LS + + LP    G ++    IR++ R++DL  
Sbjct: 114 LFKTQ---------RGQISVRVNAFTLLSKSLQVLPEKYHGLKD--TDIRYRERYVDLIV 162

Query: 136 DTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193
           +   +++ V R++II  +R  +    F+E  TP+L   +    AR F+          Y 
Sbjct: 163 NPEVRDVFVIRSKIITEIRRFLDGRGFLEVETPVLNNLAGGANARPFVTHHNTLDIPMY- 221

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           L  A +   + L+  GFD+ ++++  FR+E  DP  +    EF +L+   ++ +  D++N
Sbjct: 222 LRIALELPLKRLIVGGFDKVYELSRVFRNEGMDPTHN---PEFTELETYEAYADYVDVMN 278

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            +E++   + ++      V+ +   I   +  RR
Sbjct: 279 MVEDLYHHLADKILGTTDVAYDGQVIHLGEPFRR 312



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + G+PP GG+  GIDR+VML  G +++R+V LFP
Sbjct: 448 KALEVGLPPTGGLGIGIDRLVMLFTGQRSIRDVILFP 484


>gi|109898198|ref|YP_661453.1| asparaginyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123064673|sp|Q15UN9|SYN_PSEA6 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|109700479|gb|ABG40399.1| asparaginyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 465

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 109/278 (39%), Gaps = 43/278 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G   VG  V + GWV R R          RD       VA  D +CF+  + +    +  
Sbjct: 12  GKYSVGQQVTVKGWV-RTR----------RDSKAGLSFVALHDGSCFDPIQVIALNTLNN 60

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
              +    ++ +I A  +  + +   Q +EI    E   + + G  E P++     +   
Sbjct: 61  YADIQRLTTSCSIIATGVLKESQGQGQSLEI----EADEIEIVGWVENPDTYPMAPKRHS 116

Query: 133 LRRDTLHKNIVKRTRIINSM----RC------RMIAEN-FIECSTPILTASSPEGARDFL 181
           L     H ++  RT +I ++     C      R   EN +   STPILTAS  EGA +  
Sbjct: 117 LEYLREHAHLRPRTNVIGAVTRVRNCLSQAIHRFFHENGYCWVSTPILTASDTEGAGEMF 176

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLM-----------------ASGFDRYFQIAPCFRDED 224
             S ++  +     Q    + Q                    A+   + +   P FR E+
Sbjct: 177 RVSTLDMMNVPTTEQGQVDFSQDFFGKETFLTVSGQLNGETYATAMSKIYTFGPTFRAEN 236

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             + R   EF+ ++ E++F +  DI    E++L+ VF+
Sbjct: 237 SNTSRHLAEFWMIEPEVAFADLSDIAQLSEDLLKYVFK 274


>gi|86142116|ref|ZP_01060640.1| lysyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85831679|gb|EAQ50135.1| lysyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 564

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 130/292 (44%), Gaps = 30/292 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-G 75
           G  V ++G +   R  G   F +++D  G  QV  N D  C    K+  ++ +   +D G
Sbjct: 46  GKKVVIAGRLMSRRIQGKASFAELQDSTGRIQVYFNRDEICPGDDKTQYNDVYKKLLDIG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPV-------FGEREYPESIRFK 127
             +    E     +  G+  +  +K  +LS A + LPLP        F +   PE +R++
Sbjct: 106 DFIGIEGELFTTQV--GEKTVMVKKFTLLSKALKPLPLPKVDKDGNEFDKFNDPE-MRYR 162

Query: 128 YRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPS 184
            R+ DL  +   K++ VKRT++  +MR     + + E  TPIL  S P G  AR F+   
Sbjct: 163 QRYADLVVNPKVKDVFVKRTKLFAAMRNFFNDKGYFEVETPIL-QSIPGGAAARPFVTHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ 
Sbjct: 222 NALDIPLY-LRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYK 279

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSN----------NFLRICYDDAIRRY 286
           + + ++   E +L        NG T +            + R+   DAI+++
Sbjct: 280 DYNWMMAFTEKLLEHCATAV-NGTTEATFGEHKVDFKAPYKRVTMTDAIKQF 330



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++L+  G EIA+           R    E +  A      + E ++  F    RA + G
Sbjct: 405 RFELMVCGKEIANAYSELNDPIDQRERFEEQLKLAAKGDDEATEFIDQDF---LRALEYG 461

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 462 MPPTSGLGIGMDRLIMFLTNNQSIQEVLFFP 492


>gi|154491796|ref|ZP_02031422.1| hypothetical protein PARMER_01413 [Parabacteroides merdae ATCC
           43184]
 gi|154088037|gb|EDN87082.1| hypothetical protein PARMER_01413 [Parabacteroides merdae ATCC
           43184]
          Length = 468

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 107/271 (39%), Gaps = 34/271 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L     G+ V + GWV   R    + F+ + D   I   Q+V + D    E  
Sbjct: 6   RTKIVDVLKSEAFGTTVNVKGWVRTRRGSKQVSFIALNDGSTINNVQIVVDVDKLGEEFL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K + +   + ++G ++    +  N       +E+ A +IEI   A+    P+   ++   
Sbjct: 66  KPITTGASISVNGTLVQSQGKGQN-------VEIQATEIEIYGSADPNTYPL---QKKGH 115

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           S+ F      LR  T     V R R  +  ++        F    TP++TAS  EGA   
Sbjct: 116 SMEFLREIAHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPLITASDCEGAGQM 175

Query: 181 LVPSRVN--------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDE 223
              + +N                 F+    +     QL   L A+   + +   P FR E
Sbjct: 176 FQVTTMNLYDLKKDENGSIVYDNDFFGKQASLTVSGQLEGELAATALGQIYTFGPTFRAE 235

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           +  + R   EF+ ++ E++F   +DIL+ M+
Sbjct: 236 NSNTPRHLAEFWMIEPEVAF---NDILDNMQ 263


>gi|86359247|ref|YP_471139.1| lysyl-tRNA synthetase protein [Rhizobium etli CFN 42]
 gi|123724720|sp|Q2K424|SYK_RHIEC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|86283349|gb|ABC92412.1| lysyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 498

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 132/286 (46%), Gaps = 26/286 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           D+   D+   V ++G V+  R  G  +F+DI D  G  Q+ ++ D       +  R+   
Sbjct: 56  DVETQDI---VTVAGRVYSSRNSG--MFMDIHDASGKIQIFSHKDVT----GEEARALLP 106

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           +   G ++  +   I      G++ ++AQKIE+L+ +  LP+P          +R++ R 
Sbjct: 107 MIDIGDIIGVTG--IVRRTKRGELTINAQKIEMLTKSL-LPMPEKWHGLSDIELRYRKRH 163

Query: 131 LDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           LD+  +   K    +R++I++ +R  M  + F+E  TP+L +      A  F       +
Sbjct: 164 LDILTNEDSKLRFQQRSKIVSGIRRFMENDGFMEVETPMLQSIYGGATAEPFKTHHNTLK 223

Query: 189 GSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
              Y L  AP+ + +  + SG  D+ F+I   FR+E   +   P EF  ++   ++ + +
Sbjct: 224 LDMY-LRIAPELFLKRTLVSGLTDKVFEINRNFRNEGVSTRHNP-EFTMMECYWAYADYE 281

Query: 248 DILNTMENVLRGV------FEEFSNGN---TVSNNFLRICYDDAIR 284
           D+++ +E +   +        EF  G+   +    F R+   DA++
Sbjct: 282 DMMDLVERLFETLALSIHGTTEFDFGDKRLSFKGPFKRVPMPDAVK 327



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 12/98 (12%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++  CN +E+ +           R  M E + QA +     K++ E        A   G
Sbjct: 405 RFETYCNAWELGNAFSELNDPEEQRRRMVEQLEQAHARGEKEKQLDEE----FLDAIDQG 460

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR++MLL  A ++R+V LFP  ++  D
Sbjct: 461 MPPAGGLGIGVDRLIMLLTNAPSIRDVILFPARRSKAD 498


>gi|67920132|ref|ZP_00513652.1| Lysyl-tRNA synthetase, class-2 [Crocosphaera watsonii WH 8501]
 gi|67857616|gb|EAM52855.1| Lysyl-tRNA synthetase, class-2 [Crocosphaera watsonii WH 8501]
          Length = 573

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 115/255 (45%), Gaps = 24/255 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQV----------VANPDSACFEIAKSVRSEWV 70
           V ++G +   R  G + F  ++D  G  Q+          ++  +SA   + K   +  +
Sbjct: 68  VAIAGRIIARRVFGKLAFFSLQDESGTIQLYLDKKEIQAHMSELESAFNHLKKLTDTGDI 127

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +              G++ +  ++ EIL+ +  LPLP           R++ R+
Sbjct: 128 IGVKGSIKRTEK---------GELSVKVKEYEILTKSL-LPLPDKWHGLTDTEKRYRQRY 177

Query: 131 LDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQ 188
           +DL  +  + +   +R +I  S+R  +  + FIE  TP+L + +    AR F+      +
Sbjct: 178 VDLIVNPQVRQTFRRRAQITASIRRYLDNQGFIEIETPVLQSEAGGAEARPFITYHNTLE 237

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  A + + + L+  GF++ F++   FR+E   +   P EF  +++  ++ + +D
Sbjct: 238 MDLY-LRIATELHLKRLIVGGFEKVFEMGRIFRNEGVSTKHNP-EFTSIELYQAYADYND 295

Query: 249 ILNTMENVLRGVFEE 263
           ++   E ++    EE
Sbjct: 296 MMELTEAIITTAAEE 310



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GG+  GIDR++MLL  + ++R+V  FP+ +N
Sbjct: 470 ALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIAFPLLKN 509


>gi|138893753|ref|YP_001124206.1| lysyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|134265266|gb|ABO65461.1| Lysyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 494

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 130/311 (41%), Gaps = 39/311 (12%)

Query: 5   RTHSC-------GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH         GDL   ++      V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 34  RTHKAEELFKLYGDLSKEELEEQQIEVAVAGRIMTKRGKGKAGFAHIQDVTGQIQIYVRQ 93

Query: 55  DSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EEL 110
           D      +E+ K      ++ + G +              G++ +     E L+ A   L
Sbjct: 94  DDVGEQQYELFKISDLGDIVGVRGTMFKTKV---------GELSIKVSSYEFLTKALRPL 144

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL 169
           P    G ++  +  R++ R+LDL  +   K   + R+ II SMR  + ++ ++E  TP++
Sbjct: 145 PEKYHGLKDVEQ--RYRQRYLDLTMNPQSKQTFITRSLIIQSMRRYLDSQGYLEVETPMM 202

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            A +    AR F+        + Y +  A + + + L+  G ++ ++I   FR+E   + 
Sbjct: 203 HAIAGGAAARPFITHHNALDMTLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTR 261

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICY 279
             P EF  L++  ++ +  DI+   EN++  +  E      +         +  + R+  
Sbjct: 262 HNP-EFTMLELYEAYADFRDIMKLTENLIAHIATEVLGTTKIQYGEHTVDLTPEWRRLHM 320

Query: 280 DDAIRRY-GTD 289
            DAI+ Y G D
Sbjct: 321 VDAIKEYVGVD 331



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 454 ALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFP 489


>gi|111021392|ref|YP_704364.1| lysyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|110820922|gb|ABG96206.1| lysine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 503

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 20/255 (7%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  ++          +  G  V + G V  VR  G + F  +++  G TQ+ A    
Sbjct: 40  RTHSLAEIRAKYPELEPDTATGDQVGVVGRVIFVRNTGKLCFATLQEGDG-TQLQAMISL 98

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           A   + +   + W   +D G  +    E I++    G++ + A   +I S +   PLPV 
Sbjct: 99  AA--VGEDALALWKADVDLGDFVFVHGEVISSR--RGELSVMADSWQIASKSLR-PLPV- 152

Query: 116 GEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASS 173
             +E  E  R + R+ DL  R    +N  KR  ++  +R  +    F+E  TP+L T + 
Sbjct: 153 AHKEMNEESRVRQRYADLIVRSEARENARKRVAVVRELRNALELRGFLEVETPMLQTVAG 212

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  G ++ F+I   FR+E   S   P E
Sbjct: 213 GAAARPFITHSNALDIDLY-LRIAPELFLKRCVVGGIEKVFEINRNFRNEGVDSTHSP-E 270

Query: 234 FYQLDMEMSFVEQDD 248
           F  L+   ++   DD
Sbjct: 271 FAMLETYEAYGTYDD 285



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF----QCGMPPH 536
           ++DL   GFE+A+G        +  + F +        ++    L   F    + GMPP 
Sbjct: 411 KWDLYIRGFELATGYSELVDPVIQRERFVDQARLASAGDDEAMALDEEFLAAMEQGMPPT 470

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            G   GIDR++M L G   +RE  LFP+
Sbjct: 471 TGTGMGIDRLLMALTGL-GIRETILFPI 497


>gi|168830126|gb|ACA34354.1| lysyl-tRNA synthetase [Paenibacillus polymyxa]
          Length = 506

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 111/245 (45%), Gaps = 11/245 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  I+D  G  Q+    D+      K+     +L +  +V   
Sbjct: 71  VSIAGRIMAKRVMGKASFAHIQDLSGRIQIYVRQDTVPESKYKAF---GILDLGDIV--- 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLH 139
             + +     TG+  +    IE+LS +   PLP          +R++ R++DL  +  + 
Sbjct: 125 GVKGVLFKTKTGETTIKVLDIEVLSKSL-YPLPEKYHGLKDVELRYRQRYVDLVMNPEVQ 183

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAP 198
           K  + R+RII SMR  + +  ++E  TP L + +    A+ F+          Y +  A 
Sbjct: 184 KTFITRSRIIQSMRRYLDSLGYLEVETPTLHSIAGGAAAKPFVTHHNALDMQLY-MRIAI 242

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+  G ++ ++I   +R+E   +   P EF  +++  ++ +  DI+   EN++ 
Sbjct: 243 ELHLKRLIVGGMEKVYEIGRVYRNEGISTRHNP-EFTMIELYEAYADYKDIMQLTENMVA 301

Query: 259 GVFEE 263
            + +E
Sbjct: 302 HIAQE 306



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/41 (56%), Positives = 30/41 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           RA + GMPP GG+  GIDR+VMLL  A ++R+V LFP  +N
Sbjct: 464 RALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPHMRN 504


>gi|29347532|ref|NP_811035.1| lysyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253570876|ref|ZP_04848284.1| lysyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298383771|ref|ZP_06993332.1| lysine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|39932184|sp|Q8A5W4|SYK_BACTN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|29339432|gb|AAO77229.1| lysyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251839825|gb|EES67908.1| lysyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298263375|gb|EFI06238.1| lysine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 576

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 129/292 (44%), Gaps = 41/292 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F++++D  G  QV    D  C     E+  SV    +     +
Sbjct: 55  VSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPGEDKELYNSVFKRLLDLGDFV 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I+G V              G+I + A+K+ +L+ + + PLP+        +   E PE 
Sbjct: 115 GIEGFVFRTQM---------GEISIHAKKLTVLAKSIK-PLPIVKYKDGVAYDSFEDPE- 163

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           +R++ R++DL   + + +   KR  ++ ++R  +    + E  TPIL + +    AR F+
Sbjct: 164 LRYRQRYVDLVVNEGIKETFEKRATVVRTLRNALDEAGYTEVETPILQSIAGGASARPFI 223

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ +
Sbjct: 224 THHNSLDIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMELYV 281

Query: 242 SFVEQDDILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
            + + + +++  E +L        G  E   +G T+S    + R+   DAI+
Sbjct: 282 QYKDYNWMMSFTEKLLERICIAVNGSTETVVDGKTISFKAPYRRLPILDAIK 333



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP
Sbjct: 461 RALQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFP 497


>gi|226363746|ref|YP_002781528.1| lysyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226242235|dbj|BAH52583.1| lysyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 503

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 111/255 (43%), Gaps = 20/255 (7%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  ++          +  G  V + G V  VR  G + F  +++  G TQ+ A    
Sbjct: 40  RTHSLAEIRAKYPELEPDTATGDQVGIVGRVIFVRNTGKLCFATLQEGDG-TQLQAMISL 98

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           A   + +   + W   +D G  +    E I++    G++ + A   +I S +   PLPV 
Sbjct: 99  AA--VGEDALASWKADVDLGDFVFVHGEVISSR--RGELSVMADSWQIASKSLR-PLPV- 152

Query: 116 GEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASS 173
             +E  E  R + R+ DL  R     N  KR  ++  +R  +    F+E  TP+L T + 
Sbjct: 153 AHKEMNEESRVRQRYADLIVRPEARDNARKRVSVVRELRNALERRGFLEVETPMLQTVAG 212

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  G ++ F+I   FR+E   S   P E
Sbjct: 213 GAAARPFITHSNALDIDLY-LRIAPELFLKRCVVGGIEKVFEINRNFRNEGVDSTHSP-E 270

Query: 234 FYQLDMEMSFVEQDD 248
           F  L+   ++   DD
Sbjct: 271 FAMLETYEAYGTYDD 285



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF----QCGMPPH 536
           ++DL   GFE+A+G        +  + F +        ++    L   F    + GMPP 
Sbjct: 411 KWDLYIRGFELATGYSELVDPVIQRERFVDQARLASAGDDEAMALDEEFLAAMEQGMPPT 470

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            G   GIDR++M L G   +RE  LFP+
Sbjct: 471 TGTGMGIDRLLMALTGL-GIRETILFPI 497


>gi|254427233|ref|ZP_05040940.1| lysyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196193402|gb|EDX88361.1| lysyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 504

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 9/177 (5%)

Query: 91  TGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTR 147
           +G+ +L     E L + + L PLP   +       +++ R++DL    DT  K    R +
Sbjct: 129 SGKGDLYVMMDEYLLLTKSLRPLPEKHKGLTDTEAKYRQRYVDLIVNEDT-RKAFQIRAK 187

Query: 148 IINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLL 205
           I+  +R  ++ ++F+E  TP+L    P GA  R F+          Y L  AP+ Y + L
Sbjct: 188 IVAGIRNFLVQKDFVEAETPMLQVI-PGGATARPFITHHNSLDLDMY-LRIAPELYLKRL 245

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           +  GF++ F+I   FR+E   +   P EF  L+   ++ +  D++N  E++LR + E
Sbjct: 246 VVGGFEKVFEINRNFRNEGLSTRHNP-EFTMLEFYQAYGDYHDLMNLTEDMLRTLAE 301



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 462 ALEHGLPPTAGEGIGIDRLVMLFTDAPSIRDVILFP 497


>gi|326384068|ref|ZP_08205751.1| lysyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326197228|gb|EGD54419.1| lysyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 510

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 22/256 (8%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  ++          ++ G  V ++G +  +R  G + F  +++  G TQ+ A    
Sbjct: 47  RTHSLAEIRAQYPDLEAGTETGEQVGVAGRIIFLRNKGKLCFATLQEGDG-TQLQA---M 102

Query: 57  ACFE-IAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
             F  + +   + W    D G ++    E I++   TG++ + A   E+ S A   PLPV
Sbjct: 103 VSFNGVGEEALARWKADTDLGDIVFVHGEVISSR--TGELSIMADSWEMASKALR-PLPV 159

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
              +E  E  R + R++DL      + I + R  ++  +R  M    F+E  TP+L T  
Sbjct: 160 -AHKEMNEESRVRQRYVDLIVRPEARAIARTRVEVMAQLRKFMTDRGFLEVETPMLQTLH 218

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+  S       + L  AP+ + +  +  G +R F++   FR+E   S   P 
Sbjct: 219 GGAAARPFVTHSNAFDMDLF-LRIAPELFLKRCVVGGIERVFEVNRNFRNEGADSTHSP- 276

Query: 233 EFYQLDMEMSFVEQDD 248
           EF  L+   ++   DD
Sbjct: 277 EFAMLETYQAYGTYDD 292



 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 15/93 (16%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK---------EVVENRFGGLYRAFQC 531
           ++DL   GFE+A+G   + + + ++Q    V  ++          V++  F     A + 
Sbjct: 419 KWDLYVRGFELATG--YSELVDPVIQRERFVDQARLAAAGDDEAMVLDEEF---LVAMEH 473

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP  G   GIDR++M L G   +RE  LFP+
Sbjct: 474 GMPPTAGTGMGIDRLLMALTGL-GIRETVLFPL 505


>gi|312143648|ref|YP_003995094.1| asparaginyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904299|gb|ADQ14740.1| asparaginyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 463

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 74/345 (21%), Positives = 129/345 (37%), Gaps = 65/345 (18%)

Query: 1   MHRYRTHSCGDLGVSDVGSF--VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPD 55
           M+ ++     D+   ++ S+  V + GWV   R    I F++I D   +     V+ NP 
Sbjct: 1   MNYFQRKKIKDILADNIDSYKDVIVMGWVRTKRVSKNIAFIEINDGSCLNNLQIVILNPS 60

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               +      S  V      V  R  +          +E+ A+KI+I+  A E     F
Sbjct: 61  EFPLDDINRGASIKVTGYIDKVEGREQD----------LEMKAEKIDIIGEAPE----DF 106

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKR--TRIINSMRCRMIAENFIECSTPILTASS 173
             ++   S  F      LR  T    +V R  +++  ++      ++F    TPI+T+  
Sbjct: 107 ILQKKRHSFEFLREIAHLRARTNTFGVVNRFRSKMSYAVHDYFYNKDFKYIHTPIITSGD 166

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRY 213
            EGA +     +V    F  L +A                      Q +  LMAS     
Sbjct: 167 AEGAGEIF---KVTTLDFEKLAKAENGEIDYSQDFFGKETGLTVSGQLEAELMASALGDV 223

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------E 263
           +   P FR E   + R   EF+ ++ EM+F   D+++  +E+ ++ +F           +
Sbjct: 224 YTFGPTFRAEKSNTSRHASEFWMIEPEMAFCNLDEMMVLIEDFIKKLFTFALNEAAEEMD 283

Query: 264 FSN-----------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           F N            N +  +F +I Y +AI        D   P+
Sbjct: 284 FFNKQIDKGRREIIANIIEADFAKITYTEAIDILEKSGVDFEYPV 328


>gi|308159144|gb|EFO61691.1| Lysyl-tRNA synthetase [Giardia lamblia P15]
          Length = 576

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 2/134 (1%)

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFLVP 183
           RF+ R+LD   +   + IV+R+ IIN +R  MI + N++E  TP+L       A    V 
Sbjct: 216 RFRQRYLDFIINNTGQKIVQRSGIINFIRRFMIDQRNYLEVETPMLQTVHGGAAAQPFVC 275

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              + G    L  AP+ + + L+  G +R F+I   FR+E       P EF  ++   ++
Sbjct: 276 RSNDLGHDVYLRIAPELFLKRLVVGGLNRVFEINKNFRNESSDQTHSP-EFTMMEAYSAY 334

Query: 244 VEQDDILNTMENVL 257
            + +D+ + +E+++
Sbjct: 335 DDLEDMCDLVEDLV 348



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +    G+PP GGI  GIDR+VMLL  +  +REV  FP+
Sbjct: 533 KCLDYGLPPTGGIGIGIDRLVMLLTNSSTIREVIAFPL 570


>gi|219684771|ref|ZP_03539713.1| asparaginyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219671716|gb|EED28771.1| asparaginyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 462

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 28/279 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF--EIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F  +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFTEKDLKKLTTGASIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTYSFNVIGETDSKTYPLQKKRHTFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----- 187
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKPN 185

Query: 188 --------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NSLSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           ++ EM+F + +D ++  E++L+ +     N  +   +FL
Sbjct: 246 IEPEMAFCKLNDNISLAEDLLKYLLSSILNECSQDMDFL 284


>gi|145541363|ref|XP_001456370.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124424181|emb|CAK88973.1| unnamed protein product [Paramecium tetraurelia]
          Length = 563

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 107/274 (39%), Gaps = 37/274 (13%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEI 61
           YR     + G   +G  V ++GWV  VR    + F+++ D   +G  Q+V       FE 
Sbjct: 97  YRIQELLNSGEGYIGQTVTVAGWVRTVRDQKNLCFIELNDGTSFGGLQIVVEDKIGNFEQ 156

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                + + L + G ++   A+        GQ+     ++ I+  A+    P+    + P
Sbjct: 157 VAKTNTGFSLKVTGNIVKSPAK--------GQLIEMLHEVVIIGQADPEEYPMAKGVQKP 208

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARD 179
           E++R K     LR      + V R R   +    +  +N   +   TPI+T S  EGA +
Sbjct: 209 ETLRQKAH---LRPRGNFFSAVTRIRNNLAYATHVFFQNNGCLYIHTPIITGSDCEGAGE 265

Query: 180 FLVPSRVNQGSFYALPQ-------APQQYKQL--LMASG----------FDRYFQIAPCF 220
               S +       +PQ       A   +K+   L  SG              +   P F
Sbjct: 266 MFRISTIFDNDISKIPQIKGKVDTAQDFFKKEVNLTVSGQLQVEHFCISMSNVYTFGPTF 325

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           R E   + R   EF+ ++ E +F    D+ + ME
Sbjct: 326 RAEKAHTHRHLAEFWMIEPEFAFA---DLFDNME 356



 Score = 40.4 bits (93), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G  R    +V+ Q     G+  E     +G      + G  PH G   G +R+VM+
Sbjct: 486 ELIGGSQREERYDVLAQRIKECGLKLE----DYGPYMDLRKYGTVPHCGFGLGFERLVMM 541

Query: 550 LLGAKNVREVSLFP 563
           + G +N+R+V  FP
Sbjct: 542 VTGVENIRDVIPFP 555


>gi|290998780|ref|XP_002681958.1| lysyl tRNA synthetase [Naegleria gruberi]
 gi|284095584|gb|EFC49214.1| lysyl tRNA synthetase [Naegleria gruberi]
          Length = 653

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 24/247 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV------ANPDSACFEIAKSVRSEWVLCID 74
           V L+G +   RP G ++F  IR      QV+      A  + A  ++   +R   ++ I+
Sbjct: 180 VALAGRIITSRPTGKLVFYHIRAEGEDLQVMSGISDYAEGEDAFKKVHSVLRRGDIIGIN 239

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL 133
           G                G++ +   KI +L+     LP   +G     +  R++ R+LDL
Sbjct: 240 GFAGKSKK---------GELSIIPTKITLLTPCFHMLPKEHYGLTN--QDTRYRQRYLDL 288

Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGS 190
             +   ++I V R++II  +R  +    F+E  TP++    P G  AR F       +  
Sbjct: 289 IMNKKSRDIFVTRSKIIAHLRTFLNERGFLEVETPMMNM-IPGGANARPFTTYHNDLEML 347

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  +P+ Y + L+  G +R ++I   FR+E       P EF   +  M++ + +D++
Sbjct: 348 LY-MRISPELYLKQLVVGGLERVYEIGKNFRNEGIDLTHNP-EFTACEFYMAYADYNDLM 405

Query: 251 NTMENVL 257
              E +L
Sbjct: 406 KITEELL 412



 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 26/40 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           ++ + G+PP GG   G+DR+ M+L    N++EV LFP  +
Sbjct: 599 KSLEYGLPPTGGWGIGLDRLTMILSNNYNIKEVILFPAQK 638


>gi|283784757|ref|YP_003364622.1| asparaginyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282948211|emb|CBG87778.1| asparaginyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 466

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 108/280 (38%), Gaps = 48/280 (17%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G  DV S V + GWV   R    GI FL + D             +CF+  ++V +  + 
Sbjct: 12  GRVDVDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLP 59

Query: 72  CIDGLVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ES 123
             +  V+  +  T  + I+TG++  S    Q  EI +   E+   V     YP      S
Sbjct: 60  NYNEEVLRLT--TGCSVIVTGKVVASPGQGQSFEIQATHVEVSGWVEDPDTYPMAAKRHS 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           I +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +  
Sbjct: 118 IEYLREVAHLRPRTNMIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF 177

Query: 182 VPSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFR 221
              RV+      LP+  Q                    Q      A    + +   P FR
Sbjct: 178 ---RVSTLDLENLPRNEQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFR 234

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            E+  + R   EF+ L+ E++F   +DI    E +L+  F
Sbjct: 235 AENSNTSRHLAEFWMLEPEVAFANLNDIAALAEAMLKYAF 274


>gi|326573293|gb|EGE23261.1| lysyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
 gi|326575808|gb|EGE25731.1| lysyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 507

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 15/178 (8%)

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDF 180
           ++++ R+LDL  +   +N    R +++  +R  +  E F+E  TP++    P GA  R F
Sbjct: 167 VKYRKRYLDLMVNEETRNTFAIRAKVVAGIRAFLTQERFMEVETPMMHVI-PGGASARPF 225

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GFDR F+I   FR+E   +   P EF  ++  
Sbjct: 226 VTHHNALDMQLY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGVSTRHNP-EFTMIEFY 283

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTD 289
            ++ +  D++   E +L  +  +      VS           F +I   DAI  + +D
Sbjct: 284 QAYADYKDLMALTERMLETLAMDILGSTDVSYQGEVFSFKGPFKKITMFDAILEHNSD 341



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 467 ALEYGLPPTAGEGIGIDRLVMLFADAASIRDVILFP 502


>gi|171694880|ref|XP_001912364.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947682|emb|CAP59844.1| unnamed protein product [Podospora anserina S mat+]
          Length = 559

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 43/271 (15%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKS-VRSEWVLCIDGLVM 78
           V L G V  VR  G  ++F+D+R  +   Q + N          S +++   L   G ++
Sbjct: 87  VTLRGRVESVRRAGSKLVFIDVRSEFENVQGLCNLGKLVDGTTGSGLKNLARLLNRGDII 146

Query: 79  SRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           S + +       TG++ + A ++ E+L+       P    R  PE +           DT
Sbjct: 147 SVTGKATRTK--TGELSIQATQLPEVLT-------PSLVPR--PEKVE----------DT 185

Query: 138 LHKNI--VKRTRIINSMRCRMI----------AENFIECSTPILTASSPEG-ARDFLVPS 184
           LH++I  +   R ++++R R              NF+E  TPIL+ ++    AR F + +
Sbjct: 186 LHRHIDMLANRRTVDTLRLRSYITRYLRDFFHERNFLEFQTPILSGNAGGAVARPFTMHA 245

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                    L  AP+ + + L+  G DR F++ P FR+E       P EF   +   ++ 
Sbjct: 246 EAVSKDV-TLRIAPELWLKRLVVGGVDRVFELGPAFRNEGIDQTHNP-EFTICEFYHAYA 303

Query: 245 EQDDILNTMENVLRGVFEE----FSNGNTVS 271
              D++   ++++RGV E      SNG   S
Sbjct: 304 NLQDLITITQDLIRGVAEHCAKLISNGTLSS 334


>gi|157375499|ref|YP_001474099.1| asparaginyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189083481|sp|A8FVU8|SYN_SHESH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|157317873|gb|ABV36971.1| asparaginyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 466

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 120/320 (37%), Gaps = 71/320 (22%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           +GS V + GWV   R    GI FL + D             +CF+  + V          
Sbjct: 16  IGSQVTVRGWVRSRRDSKAGISFLAVYD------------GSCFDPIQGVVPNSLENYND 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + E +++       EL    +E+    E+    P+  +R   E +R 
Sbjct: 64  EILKLTAGCSVVMTGEVVDSPGKGQAFELQVSSVEVAGWVEDPDTYPMAAKRHSIEHLR- 122

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + FI  STP++TAS  EGA +     
Sbjct: 123 --ELAHLRPRTNIIGAVARVRNSLSQAIHRFYHEQGFIWVSTPLITASDAEGAGEMF--- 177

Query: 185 RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDED 224
           RV+      LP+  +                    Q      AS   + +   P FR E+
Sbjct: 178 RVSTLDMENLPRNDEGKVDYSEDFFGKESFLTVSGQLNAETYASALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL----RGVFEEFSNG------------- 267
             + R   EF+ ++ E++F + DD+    E +L    + V EE  +              
Sbjct: 238 SNTSRHLAEFWMVEPEVAFADLDDVAGLAEQMLKFCFKAVLEERRDDLEFFAQRVDKTVI 297

Query: 268 ----NTVSNNFLRICYDDAI 283
               + VS++F ++ Y DA+
Sbjct: 298 DRLESFVSSDFAQVDYTDAV 317


>gi|332880622|ref|ZP_08448296.1| lysine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332681610|gb|EGJ54533.1| lysine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 597

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 120/267 (44%), Gaps = 23/267 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G   FL+++D  G  QV    D  C    K + +     +  L      
Sbjct: 58  IAGRIMSRRIMGKASFLELQDSKGRIQVYVTRDDICPGENKDLYNTVFKKLLDLGDFVGV 117

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLP--------VFGEREYPESIRFKYRFLDLR 134
           +       TG+I +  Q++ +L+ + + PLP        V+   + PE +R++ R++DL 
Sbjct: 118 KGFVFKTQTGEISVHTQELTVLAKSLK-PLPIVKMKDGEVYDSFDDPE-LRYRQRYVDLI 175

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSF 191
            ++ + +  +KR+ I+ ++R  +    + E  TPIL  S P G  AR F+          
Sbjct: 176 VNSGVKETFLKRSAILKTLRAALDEAGYTEVETPIL-QSIPGGASARPFITHHNSLDIDL 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + ++ 
Sbjct: 235 Y-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKSHNP-EFTCMELYVQYKDYNWMMA 292

Query: 252 TMENVLR-------GVFEEFSNGNTVS 271
             E +L        G  E   +G T+S
Sbjct: 293 FTEKLLERICIAVNGSTESVVDGKTIS 319



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP
Sbjct: 461 RALQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFP 497


>gi|219685338|ref|ZP_03540157.1| asparagine--tRNA ligase [Borrelia garinii Far04]
 gi|219673111|gb|EED30131.1| asparagine--tRNA ligase [Borrelia garinii Far04]
          Length = 485

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 28/279 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF--EIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F  +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFTEKDLKKLTTGASIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQNY-------EIKTYSFNVIGETDSKTYPLQKKRHTFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----- 187
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKPN 185

Query: 188 --------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NSLGNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           ++ EM+F + +D ++  E++L+ +     N  +   +FL
Sbjct: 246 IEPEMAFCKLNDNISLAEDLLKYLLSSILNECSQDMDFL 284


>gi|304383221|ref|ZP_07365694.1| lysine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335692|gb|EFM01949.1| lysine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 576

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 127/291 (43%), Gaps = 43/291 (14%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---------LCI 73
           ++G +   R  G   F++++D  G  QV    D  C +  K + +            + I
Sbjct: 56  IAGRMMTRRVMGKASFVELQDSKGRIQVYITRDDICPDDNKELYNTVFKRLLDIGDFIGI 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIR 125
            G V             TG+I + A+++ +L+ + + PLPV        + + + PE +R
Sbjct: 116 KGFVFKTQ---------TGEISVHARELTVLAKSIK-PLPVVKYKDGVAYDKFDDPE-LR 164

Query: 126 FKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
           ++ R++DL   + + +  +KR  ++ +MR  + +  + E  TPIL + +    AR F+  
Sbjct: 165 YRQRYVDLVVNEGVKETFLKRAAVLRTMRSVLDSAGYTEVETPILQSIAGGASARPFITH 224

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG--------EFY 235
                   Y +  A + Y + L+  GF+  ++I   FR+E       P         ++ 
Sbjct: 225 FNALNTEMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNPEFTCMELYVQYK 283

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIR 284
             +  M+F EQ  +L  +   + G  E   +G T+S    + R+   DAI+
Sbjct: 284 DYNWMMAFTEQ--LLEKICMEVNGCTETVVDGKTISFKAPYRRLPILDAIK 332



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASG------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           +++L+ NG E+ +        I      +     ++ G  + +V +R     RA Q GMP
Sbjct: 409 RFELMVNGKELTNAYSELNDPIDQEQRFIEQMKLADKGDDEAMVIDR--DFLRALQYGMP 466

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  GI  GIDR+VML+ G   ++EV  FP
Sbjct: 467 PTSGIGIGIDRLVMLMTGQTAIQEVLFFP 495


>gi|261203891|ref|XP_002629159.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239586944|gb|EEQ69587.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 558

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 30/246 (12%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--LCIDGLV----MSRSAETINANI 89
           + FL +R      Q V    SA  EI++ +  +W+  + ++ +V    + +  E   ++ 
Sbjct: 119 LAFLMLRQQGKKVQAVV---SASDEISRPM-VKWIGGINVNSIVQVTAVVKKPEIPVSSA 174

Query: 90  ITGQIELSAQKIEILS-VAEELPLPVF-GEREYPESI---------------RFKYRFLD 132
               +EL  +K  +++  A+ LP+ V   ER  PES+               R   R LD
Sbjct: 175 TLSHLELHIRKAYMVAQAAQMLPMQVKDAERPPPESVTEEVDSETPYVTLKTRLDNRVLD 234

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           L+ +T        + +       M+       STP LT ++ EG       +   + ++ 
Sbjct: 235 LQTETNQAITWISSGVAQLFTEYMLKSGSRWISTPKLTGNASEGGAGVFEVTYFKKKAYL 294

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILN 251
           A  Q+PQ YKQ+ +A      F++ P FR E+  + R   EF  LD E +F     ++L 
Sbjct: 295 A--QSPQLYKQMCIAGDLGSVFEVGPVFRAEESNTHRHLTEFIGLDFEKTFQSHYHEVLE 352

Query: 252 TMENVL 257
             E++L
Sbjct: 353 FAEDLL 358



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 6/84 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK--EVVENRFGGLYRAFQCGMPPHGGI 539
           YD    G EI SG  R + ++ +  A +  G+    E  E+  G    AF+ G PPH G 
Sbjct: 471 YDFFMRGEEIMSGAQRINEAKELEAAMTAKGLDPNGEGFEDYIG----AFRQGCPPHAGG 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             G++RIVM  LG  N+R  +LFP
Sbjct: 527 GLGLNRIVMFFLGLPNIRLATLFP 550


>gi|225166205|ref|ZP_03727917.1| lysyl-tRNA synthetase [Opitutaceae bacterium TAV2]
 gi|224799553|gb|EEG18070.1| lysyl-tRNA synthetase [Opitutaceae bacterium TAV2]
          Length = 519

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 4/83 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAF-SNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           ++L   G EIA      +  +V  Q F +  G   + ++  F     A + GMPP GG+ 
Sbjct: 421 FELTIGGMEIAPAYSEQNDPDVQRQMFEAQAGEDIQKIDTDF---LLALEHGMPPAGGMG 477

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            GIDR+ +LL GA+++R+V LFP
Sbjct: 478 IGIDRLCILLTGAESIRDVILFP 500



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 128/289 (44%), Gaps = 31/289 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SACFEIAKSVRSEWVLCIDGL 76
           V ++G +  +R  GG  F+ I D  G  Q+    D     A  E  K    +++     L
Sbjct: 75  VAVAGRLVTIRVQGGSAFVKILDQQGQIQLYIRRDVIGLEAYTEFKKLDLGDFIGVTGTL 134

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRR 135
             ++          TG+I + A    ++S A   LP    G  + PE + ++ R+LDL  
Sbjct: 135 FKTK----------TGEITVRADNYTLVSKALRPLPEKWHGLSD-PEQV-YRQRYLDLIV 182

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           +   +  ++ R++II  +R  +   NF+E  TP+L + +   A           G  + L
Sbjct: 183 NPESRARLQLRSKIITHIRRFLEDRNFLEVETPVLQSVAGGAAARPFETHHNALGVDFVL 242

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             + + Y + ++  GFDR F+I   FR+E   S R   EF  L++  ++ +   ++  + 
Sbjct: 243 RISLELYLKRMLVGGFDRVFEIGRNFRNEG-VSRRHNPEFTMLEVYQAYSDYRGMMTLVR 301

Query: 255 NVLRGV---------FEEFSNGNTV--SNNFLRICYDDAIRRYGTDKPD 292
           ++ + +          +  ++G T+  + ++  + Y D I+   T+ PD
Sbjct: 302 DLFQSLCRDVLGTTEIKHAASGETINFAGDWREVPYKDLIKD-ATNDPD 349


>gi|30250282|ref|NP_842352.1| lysS; putative lysyl-tRNA synthetase protein [Nitrosomonas europaea
           ATCC 19718]
 gi|39932150|sp|Q82SH1|SYK_NITEU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|30181077|emb|CAD86267.1| lysS; putative lysyl-tRNA synthetase protein [Nitrosomonas europaea
           ATCC 19718]
          Length = 502

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 22/297 (7%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SC    +      V+++G +   R  G   F  I+D  G  Q+  + D       ++ R 
Sbjct: 53  SCSREELESSQVTVKVAGRMLFKRVMGKASFATIQDMSGRIQLYISNDHTGETAHEAFRH 112

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             +  I G      AE +     T ++ L   ++ +L+ +   PLP        +  +++
Sbjct: 113 YDLGDILG------AEGVLFKTRTDELSLRVTQLHLLTKSLR-PLPEKFHGLADQEQKYR 165

Query: 128 YRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPS 184
            R+LDL   +   +    R++II ++R  ++  +++E  TP++  S P GA  R F+   
Sbjct: 166 RRYLDLITNEDTRRVFAIRSKIIQAIREFLVDRDYLEVETPMM-HSIPGGATARPFVTHH 224

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                S Y L  AP+ Y + L+  G ++ F+I   FR+E   +   P EF  L+   ++ 
Sbjct: 225 NALDMSLY-LRIAPELYLKRLVVGGMEKVFEINRNFRNEGISTRHNP-EFTMLEFYEAYQ 282

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
           + + +++  E++LR V  + S    +         +  F R+    AI +Y  +  D
Sbjct: 283 DHNYLMDLTESMLREVALKVSGTTRIVYQQREMDLAQPFARLTIAQAILKYHPEYSD 339



 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE---NRFGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F     +KE  +     +   Y +A + G+PP 
Sbjct: 410 RFELYIAGREIANGFSELNDPEDQANRFLEQARAKEAGDLEAMHYDADYIQALEYGLPPT 469

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 470 AGEGIGIDRLVMLLTDSPSIRDVILFP 496


>gi|71417041|ref|XP_810455.1| lysyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70874987|gb|EAN88604.1| lysyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 580

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 89/175 (50%), Gaps = 11/175 (6%)

Query: 91  TGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLD--LRRDTLHKNIVKRTR 147
           TG+  ++A +I +LS     LP   +G     +  RF+ R+LD  + R+ + +  V R++
Sbjct: 175 TGEFSMNAFEITLLSTCYHMLPDGWYGLSSIEQ--RFRQRYLDFIVNRENI-QTFVTRSK 231

Query: 148 IINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLL 205
           +I  +R      NF+E  TP+L   +    AR F+   + +NQ  +  +  AP+ Y + L
Sbjct: 232 VIRYIRNFFEDLNFLEVETPVLNQIAGGAAARPFITHHNELNQRMYLRI--APELYLKEL 289

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +  G DR +++   FR+E       P EF  ++   ++ + +D + T E++  G+
Sbjct: 290 VVGGMDRVYELGKQFRNEGIDLTHNP-EFTSVEAYWAYADYNDWMRTTEDLFYGL 343



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTV 579
           G  +A +  +PP GG   GIDR+VM L    N++EV LFP M       L   P T+
Sbjct: 515 GFVQALEHALPPTGGWGLGIDRLVMFLTSQANIKEVLLFPAMKPETSSSLTYPPGTL 571


>gi|309389246|gb|ADO77126.1| asparaginyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 463

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 111/285 (38%), Gaps = 38/285 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSF--VRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPD 55
           M+ +      D+    + S+  V + GWV   R    I F+++ D   +     V+ +PD
Sbjct: 1   MNYFAKEKIKDILSDKIESYQDVIVMGWVRTKRVSKNIAFIEMNDGTTLENLQLVILDPD 60

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                   +  S  V      V  R  +          +E+ A+ IEI+  A E     F
Sbjct: 61  KHPLADINTGASIKVTGYIDKVEGREQD----------VEMKAENIEIIGEAPE----DF 106

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKR--TRIINSMRCRMIAENFIECSTPILTASS 173
             ++   S  F      LR  T    +V R  +++  ++      E+F    TPI+T+  
Sbjct: 107 ILQKKRHSFEFLREIAHLRARTNTFGVVNRFRSKMSYAIHNYFYEEDFKYIHTPIITSGD 166

Query: 174 PEGA--------RDFLVPSRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQI 216
            EGA         D   P +   G       F+          QL   L+A+     +  
Sbjct: 167 AEGAGEVFKVSTLDLDNPPKTEAGKIDYSQDFFGEETGLTVSGQLEAELLATALGDVYTF 226

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            P FR E+  + R   EF+ ++ EM+F   D+++  ME+ ++ +F
Sbjct: 227 GPTFRAENSNTSRHASEFWMIEPEMAFCNLDEMMTLMEDFIKNLF 271


>gi|330910710|gb|EGH39220.1| asparaginyl-tRNA synthetase [Escherichia coli AA86]
          Length = 466

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 111/280 (39%), Gaps = 54/280 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 63

Query: 76  LVMSRSAETINANIITG----------QIELSAQKIEILSVAEEL-PLPVFGEREYPESI 124
            V+  +  T  + I+TG          Q E+ A K+E++   E+    P+  +R    SI
Sbjct: 64  DVLRLT--TGCSVIVTGKVVASPGQGQQFEIQASKVEVVGWVEDPDTYPMAAKRH---SI 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +   
Sbjct: 119 EYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF- 177

Query: 183 PSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRD 222
             RV+      LP+  Q                    Q      A    + +   P FR 
Sbjct: 178 --RVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRA 235

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E+  + R   EF+ L+ E++F   +DI    E +L+ VF+
Sbjct: 236 ENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFK 275


>gi|212704562|ref|ZP_03312690.1| hypothetical protein DESPIG_02622 [Desulfovibrio piger ATCC 29098]
 gi|212671961|gb|EEB32444.1| hypothetical protein DESPIG_02622 [Desulfovibrio piger ATCC 29098]
          Length = 528

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/291 (20%), Positives = 125/291 (42%), Gaps = 23/291 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G    ++G +  +R  G + F  I D  G  Q  A+ +    E+   V+   V    G +
Sbjct: 89  GDVFAIAGRIVSLRSFGKVAFFHIMDESGRIQCYASREELPEEVYNVVKKLDV----GDI 144

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +  S    +    TG++ +S + +++++ +   LP    G ++     R++ R++DL   
Sbjct: 145 VGVSGHLFHTK--TGELTISCRNLKLITRSMRPLPEKYHGLKDM--ETRYRQRYVDLIVT 200

Query: 137 TLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
              + I  KR+ I++  R  +    F+E  TP++ A +    AR F           Y +
Sbjct: 201 ERAREIFRKRSMIVSEFRRFLEERGFMEVETPMMQAVAGGAAARPFETYHNALDLKLY-M 259

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF++ F++   FR+E   +   P EF   +   ++    D+++  E
Sbjct: 260 RIAPELYLKRLLVGGFEKVFELNRNFRNEGIDTRHNP-EFTSCEFYWAYANFHDLMDLTE 318

Query: 255 NVLRGVFEEFSNGNTVS----------NNFLRICYDDAIRRYGTDKPDLRN 295
            +   +  +   G  ++            + R+ + +++ + G   P+  N
Sbjct: 319 ELFARLANKVCGGTVITYQGQEIDLTPGKWTRMSFYESLTKIGGHSPEFYN 369



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL  + ++REV LFP+
Sbjct: 486 RALEYGMPPAAGEGIGIDRLVMLLTDSASIREVILFPL 523


>gi|86132072|ref|ZP_01050668.1| lysyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85817406|gb|EAQ38586.1| lysyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 564

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 17/252 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-G 75
           G  V ++G +   R  G   F +I+D  G  QV  N D  C    KS  +E +   +D G
Sbjct: 46  GEKVVMAGRLMSRRIQGNASFAEIQDGEGRIQVYFNRDEICTGEDKSKYNEVYKKLLDIG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP-------VFGEREYPESIRFK 127
             +    E     +  G+I +  +   +LS A + LP P       V      PE +R++
Sbjct: 106 DFIGIEGEMFTTKV--GEITVLVKDFTLLSKALKPLPQPRTDDEGKVHDAFTDPE-MRYR 162

Query: 128 YRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R++DL  +   K + VKRT++ N+MR       + E  TP+L   +    AR F+    
Sbjct: 163 QRYVDLTVNPHVKEVFVKRTKLFNAMRNFFNDAGYFEVETPVLQPIAGGAAARPFITHHN 222

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y +  A + Y + L+  GF+  ++ +  FR+E       P EF  +++ +++ +
Sbjct: 223 SLDMPLY-MRIANELYLKRLIVGGFEGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKD 280

Query: 246 QDDILNTMENVL 257
            + +++  E +L
Sbjct: 281 YNWMMDFCEQLL 292



 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           R+ + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 456 RSLEYGMPPTSGMGIGMDRLIMFLTNNQSIQEVLFFP 492


>gi|312218276|emb|CBX98222.1| hypothetical protein [Leptosphaeria maculans]
          Length = 1039

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 22/152 (14%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL-----VPS------------RVN 187
           R+ +   +       +F++C TPI+T+S  EGA +       VPS            +  
Sbjct: 177 RSLVTAHVTSYFAKHDFVQCHTPIITSSDCEGAGEVFTVAPEVPSPATPEATSTNQMKQR 236

Query: 188 QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           +  F+  P+      QL    +A   ++ + ++P FR E   + R   EFY L+ E++FV
Sbjct: 237 EDLFFGSPKYLTVSGQLHLEALAQSVNKVWTLSPAFRAEKSDTARHLSEFYMLEAELAFV 296

Query: 245 EQ-DDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +  + I++ +E++LR V  E  + +TV +  L
Sbjct: 297 DDVNQIMDVVEDMLRSVTSEVKS-STVGHELL 327



 Score = 37.0 bits (84), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 12/117 (10%)

Query: 453 DFAHN--PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           D+  N  PF M        +     ++  F   LV    E+  G +R H    +LQA   
Sbjct: 413 DYPRNIKPFYMAPSTSMQTEAQAATTVACFDL-LVPEICELVGGSMREHRLHELLQAMKE 471

Query: 511 VGIS---------KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
            G+          +   E+         + G  PHGG   G DR++  L G  N+R+
Sbjct: 472 HGLQGAEGAADGDEAATEDALQWYVDLRRYGSVPHGGFGLGFDRLLCYLSGVSNIRD 528


>gi|209554140|ref|YP_002284767.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|226695839|sp|B5ZBH7|SYN_UREU1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|209541641|gb|ACI59870.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
          Length = 454

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 115/296 (38%), Gaps = 40/296 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDS-ACFEIAKSVRSEWVLCID 74
           G  V++  WV   R    I FL + D   +T  Q V   D  + +E   + R    + I+
Sbjct: 18  GQKVQIKAWVRSNRDSKKIGFLVLNDGSSLTNLQAVYRVDKISNYEEITAARMWAAVAIE 77

Query: 75  GLV--MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           G++     + + +   ++  QI L     + L    +L L         E++R     L 
Sbjct: 78  GVIKLTPTAKQPLELEVLNAQI-LKQSDEDFLLSNNDLSL---------ETLRLNAH-LR 126

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R +  H  +  R  +  ++   M    +   + P+ T +  EGA +     + +   F+
Sbjct: 127 PRTNLFHAIMKVRATLAFAVHEFMNQNEYSWLAAPLFTGNDAEGAGETFSIQKFDNEEFF 186

Query: 193 ALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE---- 245
                     Q +    A  F   +   P FR E   ++R   EF+ ++ EM+FV+    
Sbjct: 187 GKQTHLSVTGQLQAEAYAQAFGNVYTFGPTFRAEKSHTNRHLAEFWMIEPEMAFVDLKGM 246

Query: 246 QDDILNTMENVLRGVFEEFSN-----------------GNTVSNNFLRICYDDAIR 284
           QD + N +++V++ V E+                       V + F RI Y DA++
Sbjct: 247 QDIVENLIKHVIKAVLEKNQQELEFLAQRNDENLIKKLQKVVDSKFERIEYKDAVK 302


>gi|300814563|ref|ZP_07094817.1| asparagine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511331|gb|EFK38577.1| asparagine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 461

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 122/318 (38%), Gaps = 51/318 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           + + GW+   R      F+++ D  ++   QVV   +   F EI K   S  ++    LV
Sbjct: 19  IEICGWIKTNRGSKNFGFIELTDGTNFNSLQVVYGKELGNFSEIEKYTLSSSLIIKGKLV 78

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            S  A            EL A++I+++  A+    P+  +R   E +R     L  R +T
Sbjct: 79  ESPGANQ--------SFELQAKEIKLIGAADN-TYPLQKKRHTMEYLR-TVSHLRPRTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            +     R+ I  ++        F+    PI+TAS  EGA +    + +         + 
Sbjct: 129 FNAVFRVRSLIAYAIHKFFQERGFVYFHAPIITASDAEGAGEMFQVTTLPLEDIPKNDEG 188

Query: 198 PQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              YK+        L  SG          F   +   P FR E+  + R   EF+ ++ E
Sbjct: 189 KVDYKKDFFGKETNLTVSGQLEDEAFALAFGNVYTFGPTFRAENSNTPRHAAEFWMIEPE 248

Query: 241 MSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNFLRICY 279
           M+F + +  ++  E +L+ +              F +F +        N VSN F RI Y
Sbjct: 249 MAFADLNVNMDVAEAMLKYIIRYVLENAKEEMKFFNKFIDKDLLARLDNVVSNEFERITY 308

Query: 280 DDAIRRYGTDKPDLRNPI 297
             AI        + + P+
Sbjct: 309 TQAIEILEKANKEFKFPV 326


>gi|217970370|ref|YP_002355604.1| lysyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217507697|gb|ACK54708.1| lysyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 513

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 60/282 (21%), Positives = 121/282 (42%), Gaps = 30/282 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS----EWVLCIDGL 76
           VR++G +   R  G   F+ I+D  G  Q+    D    ++    ++    + V C+  +
Sbjct: 67  VRVAGRIMLKRIMGKASFVTIQDLSGRIQLYVQRDGVGEDVYAQFKTWDIGDIVGCVGTV 126

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRR 135
             ++          TG++ + A +I +L+ +   LP    G  +  +  +++ R++DL  
Sbjct: 127 FKTK----------TGELTVKAAEIRLLTKSLRPLPDKFHGLTDVEQ--KYRQRYVDLIM 174

Query: 136 DTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           +   +   V R+R++ S+R  M    F+E  TP++        A+ F           + 
Sbjct: 175 NEQSRFTFVARSRMVQSIRNYMTGHGFLEVETPMMHPIPGGAAAKPFTTHHNALDMELF- 233

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  G ++ F++   FR+E   S R   EF  ++   ++     +++  
Sbjct: 234 LRIAPELYLKRLVVGGLEKVFEVNRNFRNEG-LSPRHNPEFTMMEFYEAYANYKTLMDFT 292

Query: 254 ENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRRY 286
           E ++R    E     +         +S  F R+    AIR+Y
Sbjct: 293 EGLIRHAAREALGTESFVYQGRELDLSKPFHRLTIVQAIRKY 334



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  A  +R+V LFP
Sbjct: 460 RALEYGLPPTGGCGIGIDRLVMLLTDAPAIRDVILFP 496


>gi|308049454|ref|YP_003913020.1| asparaginyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307631644|gb|ADN75946.1| asparaginyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 466

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 107/278 (38%), Gaps = 44/278 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV------ 65
           G   VGS V + GW+   R    GI FL + D             +CF+  + V      
Sbjct: 12  GDHAVGSEVTVRGWIRTRRDSKAGISFLAVYD------------GSCFDPIQGVAPNNLP 59

Query: 66  --RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPE 122
              +E +    G  +  + E + +     Q E+    ++++   E+    P+  +R    
Sbjct: 60  NYENEILRLTAGCSVEMTGEVVESPGQGQQFEMKVTNVKVVGWVEDPDTYPMAAKRH--- 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           SI +      LR  T     V R R  +  ++      + FI  STPILTAS  EGA + 
Sbjct: 117 SIEYLREVAHLRPRTNITGAVMRVRNCLSQAIHRFYHEQGFIWVSTPILTASDCEGAGEM 176

Query: 181 LVPSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDE 223
              S ++  +   L      Y Q        L  SG            + +   P FR E
Sbjct: 177 FRVSTLDMNNLPRLENGEVDYDQDFFGKETFLTVSGQLNAETYACAMSKVYTFGPTFRAE 236

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           +  + R   EF+ ++ E++F + +D     E +L+  F
Sbjct: 237 NSNTSRHLAEFWMVEPEVAFADLEDNAKLAEAMLKYCF 274



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +++ Q    +G+ KE +       YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDILDQRMEEMGLPKEEMY-----WYRDLRRYGTIPHAGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R+V  + G  N+R+V  FP S
Sbjct: 436 LGFERLVSYVTGVTNIRDVIPFPRS 460


>gi|239608825|gb|EEQ85812.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
 gi|327356134|gb|EGE84991.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 558

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 30/246 (12%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--LCIDGLV----MSRSAETINANI 89
           + FL +R      Q V    SA  EI++ +  +W+  + ++ +V    + +  E   ++ 
Sbjct: 119 LAFLMLRQQGKKVQAVV---SASDEISRPM-VKWIGGINVNSIVQVTAVVKKPEIPVSSA 174

Query: 90  ITGQIELSAQKIEILS-VAEELPLPVF-GEREYPESI---------------RFKYRFLD 132
               +EL  +K  +++  A+ LP+ V   ER  PES+               R   R LD
Sbjct: 175 TLSHLELHIRKAYMVAQAAQMLPMQVKDAERPPPESVTEEVDSETPYVTLKTRLDNRVLD 234

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           L+ +T        + +       M+       STP LT ++ EG       +   + ++ 
Sbjct: 235 LQTETNQAITWISSGVAQLFTEYMLKSGSRWISTPKLTGNASEGGAGVFEVTYFKKKAYL 294

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILN 251
           A  Q+PQ YKQ+ +A      F++ P FR E+  + R   EF  LD E +F     ++L 
Sbjct: 295 A--QSPQLYKQMCIAGDLGSVFEVGPVFRAEESNTHRHLTEFIGLDFEKTFQSHYHEVLE 352

Query: 252 TMENVL 257
             E++L
Sbjct: 353 FAEDLL 358



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 6/84 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK--EVVENRFGGLYRAFQCGMPPHGGI 539
           YD    G EI SG  R + ++ +  A +  G+    E  E+  G    AF+ G PPH G 
Sbjct: 471 YDFFMRGEEIMSGAQRINEAKELEAAMTAKGLDPNGEGFEDYIG----AFRQGCPPHAGG 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             G++RIVM  LG  N+R  +LFP
Sbjct: 527 GLGLNRIVMFFLGLPNIRLATLFP 550


>gi|171920875|ref|ZP_02932036.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|185178894|ref|ZP_02964665.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024292|ref|ZP_02996982.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518581|ref|ZP_03004036.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|188524536|ref|ZP_03004527.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|198273637|ref|ZP_03206172.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|225550941|ref|ZP_03771890.1| asparagine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551449|ref|ZP_03772395.1| asparagine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|171903086|gb|EDT49375.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209152|gb|EDU06195.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188018966|gb|EDU57006.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188997791|gb|EDU66888.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195659639|gb|EDX53019.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|198249665|gb|EDY74446.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|225379264|gb|EEH01629.1| asparagine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225380095|gb|EEH02457.1| asparagine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 454

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 115/296 (38%), Gaps = 40/296 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDS-ACFEIAKSVRSEWVLCID 74
           G  V++  WV   R    I FL + D   +T  Q V   D  + +E   + R    + I+
Sbjct: 18  GQKVQIKAWVRSNRDSKKIGFLVLNDGSSLTNLQAVYRVDKISNYEEITAARMWAAVAIE 77

Query: 75  GLV--MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           G++     + + +   ++  QI L     + L    +L L         E++R     L 
Sbjct: 78  GVIKLTPTAKQPLELEVLNAQI-LKQSDEDFLLSNNDLSL---------ETLRLNAH-LR 126

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R +  H  +  R  +  ++   M    +   + P+ T +  EGA +     + +   F+
Sbjct: 127 PRTNLFHAIMKVRATLAFAVHEFMNQNEYSWLAAPLFTGNDAEGAGETFSIQKFDNEEFF 186

Query: 193 ALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE---- 245
                     Q +    A  F   +   P FR E   ++R   EF+ ++ EM+FV+    
Sbjct: 187 GKQTHLSVTGQLQAEAYAQAFGNVYTFGPTFRAEKSHTNRHLAEFWMIEPEMAFVDLKGM 246

Query: 246 QDDILNTMENVLRGVFEEFSN-----------------GNTVSNNFLRICYDDAIR 284
           QD + N +++V++ V E+                       V + F RI Y DA++
Sbjct: 247 QDIVENLIKHVIKAVLEKNQQELEFLAQRNDENLIKKLQKVVDSKFERIEYKDAVK 302


>gi|224106978|ref|XP_002333583.1| predicted protein [Populus trichocarpa]
 gi|222837523|gb|EEE75888.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 4/151 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R+LDL  +   + I K R++II  ++  +   +F+E  TP++   +    AR 
Sbjct: 241 QETRYRQRYLDLMLNLEVQQIFKTRSKIIKYVKSFLDNLDFLEVETPMMNMIAGGAAARP 300

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  AP+ + + L+  G DR ++I   FR+E       P EF   + 
Sbjct: 301 FVTHHNDLNMKLY-MRIAPELFLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTTCEF 358

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
            M++ + +D++   E +L G+ +E + G  +
Sbjct: 359 YMAYADYNDLMELTEKMLSGMVKELTGGYKI 389



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+VMLL  ++N++EV LFP
Sbjct: 552 ALEYGLPPTGGWGMGIDRLVMLLTDSQNIKEVLLFP 587


>gi|29833838|ref|NP_828472.1| lysyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|29610963|dbj|BAC75007.1| putative lysyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 1093

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/278 (21%), Positives = 107/278 (38%), Gaps = 25/278 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+      S  G  V ++G V  VR  GGI+F  +RD  G  Q+      +   + + 
Sbjct: 644 RTHTLARARGSPAGEQVTVAGRVMLVRDFGGIVFAVLRDWSGDLQLALTRSGSGPALDR- 702

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-------PLPVFGE 117
                          + A+  +    TG+   S +    + V +         PLP    
Sbjct: 703 -------------FGKDADIGDHITATGRTGTSDRGEPTVFVTDWQLTGKCLRPLPDKHR 749

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
                  + + R+LDL      + +V+ R+  + ++R  ++   ++E  TP+L       
Sbjct: 750 GLADPEAKVRRRYLDLVASPDARAVVRARSTAVQALRQGLLDRGYLEVETPMLQQIHGGA 809

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F           Y L  AP+ Y + L   G ++ F++   FR+E       P EF 
Sbjct: 810 NARPFTTHINAYDLDLY-LRIAPELYLKRLCVGGLEKVFEMGRTFRNEGVSYKHNP-EFT 867

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
            L+   +F + D +L+    +++G       G     N
Sbjct: 868 MLEAYQAFADYDVMLDLTRELIQGAATAAFGGPVARKN 905



 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VM L G   +RE   FP+
Sbjct: 1054 ALEYAMPPTGGLGIGVDRLVMFLTGL-TIRETLPFPL 1089


>gi|168704919|ref|ZP_02737196.1| lysyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 553

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 3/89 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN--VGISKEVVENRFG-GLYRAFQCGMPP 535
           A +++L  +G E+A+     +      Q FS    G+S +    +      RA + GMPP
Sbjct: 459 AERFELYVHGMELANAYTELNDPITQEQTFSQQLAGLSDDDSMAKMDHDFIRALRHGMPP 518

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GG+  GIDR+VMLL   + +R+V LFP+
Sbjct: 519 AGGLGIGIDRLVMLLTNTQTIRDVILFPL 547


>gi|331646196|ref|ZP_08347299.1| asparagine--tRNA ligase [Escherichia coli M605]
 gi|331044948|gb|EGI17075.1| asparagine--tRNA ligase [Escherichia coli M605]
          Length = 481

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 111/280 (39%), Gaps = 54/280 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 31  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 78

Query: 76  LVMSRSAETINANIITG----------QIELSAQKIEILSVAEEL-PLPVFGEREYPESI 124
            V+  +  T  + I+TG          Q E+ A K+E++   E+    P+  +R    SI
Sbjct: 79  DVLRLT--TGCSVIVTGKVVASPGQGQQFEIQASKVEVVGWVEDPDTYPMAAKRH---SI 133

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +   
Sbjct: 134 EYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF- 192

Query: 183 PSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRD 222
             RV+      LP+  Q                    Q      A    + +   P FR 
Sbjct: 193 --RVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRA 250

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E+  + R   EF+ L+ E++F   +DI    E +L+ VF+
Sbjct: 251 ENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFK 290


>gi|330723313|gb|AEC45683.1| asparaginyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 446

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 107/256 (41%), Gaps = 37/256 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + + GW+   R +  I FL+I D   +   Q+V   D A  E            I+ L +
Sbjct: 18  ISIKGWLTNSRGNAKIKFLEINDGSTFENLQLVLKNDKATIE-----------QIETLNL 66

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-ESIRFKYRFLDLRRDT 137
             + E       T Q   + QK E+L    +L +      E+P ++      FL   R  
Sbjct: 67  GAAIEVKGVFAYTPQ---AQQKGELL--CSQLTILAHSNAEFPIQNQEMSSEFL---RSI 118

Query: 138 LHKNIVKRTRIINS-MRCRMI----------AENFIECSTPILTASSPEGARDFLVPSRV 186
            H  I  RT++  + MR R              +F+  S+PI+T++  EGA +  V    
Sbjct: 119 PH--IRHRTKLFRAVMRIRSTLAFEIHEYFRKHDFLYLSSPIITSNDGEGAGEAFVVDNE 176

Query: 187 NQGSF--YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
            +  F   A      Q      A GF + +  AP FR E   + +   EF+ ++ E+SF 
Sbjct: 177 EKDFFNKKATLGVTGQLHAEAYALGFQKVYTFAPTFRAERSNTKKHAAEFWMIEPEVSFY 236

Query: 245 EQDDILNTMENVLRGV 260
           +  DI++  +++L+ V
Sbjct: 237 KLKDIIHLGDSLLKTV 252


>gi|124359384|gb|ABN05850.1| Lysyl-tRNA synthetase, class-2; Aminoacyl-transfer RNA synthetase,
           class II [Medicago truncatula]
          Length = 610

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 6/150 (4%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R LDL  +T  + I + R++II+ +R  +   +F+E  TP++   +    AR 
Sbjct: 241 QETRYRLRHLDLMLNTEVREIFRTRSKIISYVRSFLDKLDFLEVETPMMNMIAGGAAARP 300

Query: 180 FLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           F+   + +N   F  +  AP+ Y + L+  G +R ++I   FR+E       P EF   +
Sbjct: 301 FVTHHNDLNMRLFMRI--APELYLKKLVVGGLNRVYEIGKQFRNEGIDLTHNP-EFTTCE 357

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
             M++ +  D++   EN+L G+  E + G+
Sbjct: 358 FYMAYKDYYDLMEITENMLSGMVYELTKGS 387



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF----QCGMPPH 536
           +++L  N  E+A+     +   V  Q F++    ++  ++    L   F    + G+PP 
Sbjct: 502 RFELFINKHELANAYTELNDPVVQRQRFADQLKDRQSGDDEAMALDETFCTALEYGLPPT 561

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+ MLL  ++N++EV LFP
Sbjct: 562 AGWGLGIDRLTMLLTDSQNIKEVLLFP 588


>gi|159109388|ref|XP_001704959.1| Asparaginyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157433035|gb|EDO77285.1| Asparaginyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 548

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 29/256 (11%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVLCIDGL 76
           V + GW HRVR     + F+ +RD  G  Q+V N   AC    ++   +R+E  +   G+
Sbjct: 120 VVVCGWCHRVRVSSPKLAFVVLRDGTGYCQLVLN--EACMGTRRTQTLLRTEAAVKAVGI 177

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYPES---IRFKYRF 130
           +++ +          G  E+     +I+        P  GE   R  PES    R + R 
Sbjct: 178 LVADTR-------AQGGYEIQCLYFDIIG-------PSSGEFETRITPESGPDARARERH 223

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +     +  R RI+ + R     + + E + P +  +  EG           + +
Sbjct: 224 LIHRGEHGSAILKARGRILRAFRNHFYFKGWTEVTPPTIVNTECEGGSSLFKVDFYGEDA 283

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y + ++++  D Y  I P FR E   + R   EF  L+ E  F+   ++L
Sbjct: 284 Y--LTQSSQLYLESVISALGDVYC-ILPSFRAEKSNTRRHLSEFTHLETEHPFITFSELL 340

Query: 251 NTMENVLRGVFEEFSN 266
             +E+ +  V  E  N
Sbjct: 341 GIIEDFVISVVTELKN 356


>gi|328716490|ref|XP_001950701.2| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like isoform 1
           [Acyrthosiphon pisum]
          Length = 424

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G E+ +GG R H    +++   +  +  E    +F     AF+ G PP  G   
Sbjct: 339 YDMFMRGEEVLTGGQRIHDYHYLMKRAKHCQVDIE----KFAYYLDAFRYGCPPLAGGGI 394

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+R  S+FP
Sbjct: 395 GLERVVMLYLGLDNIRIASMFP 416



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 25/240 (10%)

Query: 47  ITQVVANPDSACF-EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105
           +  VV++  S  F +   ++  E V+ I G V +R+   I  +     +EL  +++ ++S
Sbjct: 12  VLAVVSDTISKQFVKFCSNITKESVVDIKGKV-ARTPSKI-GSCSQKDVELYIEELWVVS 69

Query: 106 -VAEELPL-------PVFGEREYPE-----SIRFKYRFLDLRRDTLHKNIVKRTRIINSM 152
             A++LPL       PV G+ +  +       +   R +DLR             +    
Sbjct: 70  QSADQLPLLLEDAYRPVNGDDKDADIRANLDTKLDNRAIDLRTPANQAIFRLEAVVCKFF 129

Query: 153 RCRMIAENFIECSTP-ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
           R  + A+ F+E   P I  A +  G   F +     +GS Y L Q P  +  + +A  F+
Sbjct: 130 REILTAKGFVEIFPPRIKNAVTGNGTNVFKI--SYFKGSAY-LAQCPTFHNIIAIAGDFE 186

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFSN 266
           R F I P FR ED  S R   EF  L++EM+F        D I +   ++ +G+ E + +
Sbjct: 187 RVFTIGPVFRPEDSNSHRHLTEFTNLNLEMTFKHHYHEVVDVIASLFTSIFKGLRENYQS 246


>gi|68487983|ref|XP_712150.1| hypothetical protein CaO19.6698 [Candida albicans SC5314]
 gi|68488034|ref|XP_712125.1| hypothetical protein CaO19.13990 [Candida albicans SC5314]
 gi|77023052|ref|XP_888970.1| hypothetical protein CaO19_6698 [Candida albicans SC5314]
 gi|46433493|gb|EAK92931.1| hypothetical protein CaO19.13990 [Candida albicans SC5314]
 gi|46433520|gb|EAK92957.1| hypothetical protein CaO19.6698 [Candida albicans SC5314]
 gi|76573783|dbj|BAE44867.1| hypothetical protein [Candida albicans]
          Length = 489

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 38/255 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD---HYGITQVVANPDSACFEIAKS--VRSEWVL 71
           +GS +   G+V  +R    + F+DI D      +  V+  PD   F++ +S  V+ +W +
Sbjct: 39  IGSIIEARGFVKSIRSSKKVGFVDITDGSISNNLNIVLQGPDQPKFKVGQSIVVKGDWTV 98

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRF 130
                   +    +  N    Q       I IL  V ++ PL     ++   S+ F   F
Sbjct: 99  G-----KGKQPFELKYNPENPQ-----HAITILGDVTDDYPL-----QKKATSMSFLRNF 143

Query: 131 LDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
            ++  R  TL   +  R+ +   +     + +FI+ + P++T+S  EGA +      +N 
Sbjct: 144 PEIKHRTSTLGSFLRLRSHLEFKLMEFFQSRDFIKVTPPLITSSDCEGAGEVFKIEPLND 203

Query: 189 GSFYALPQAP-----------QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +    P+ P            Q     +A   +R + + PCFR E+  + R   EF+ L
Sbjct: 204 NN----PKEPFFGKNAYLTVSTQLHLECLALALNRAWTLTPCFRAENSNTTRHLSEFWML 259

Query: 238 DMEMSFVEQDDILNT 252
           + E+S V   D + T
Sbjct: 260 EAEISHVNNVDQVTT 274



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 5/90 (5%)

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           +DL+   F E+A G +R H  +V+L       ++ E +E          + G  PHGG  
Sbjct: 403 FDLLVPEFGELAGGSMREHDYQVLLANMKQENMNIEDME----WYLNLRKQGTIPHGGFG 458

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R++  L G  NVR++S FP +   C+
Sbjct: 459 LGFERLISYLAGYDNVRDISAFPRAPELCN 488


>gi|186685281|ref|YP_001868477.1| lysyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|238689252|sp|B2J384|SYK_NOSP7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|186467733|gb|ACC83534.1| lysyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 561

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 66/327 (20%), Positives = 137/327 (41%), Gaps = 42/327 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQV----------VANPDSACFEIAKSVRSEW- 69
           V ++G +   R  G + F  ++D  G  Q+          +A+ D+  F   K +     
Sbjct: 55  VAIAGRIMARRVFGKLAFFTLQDETGTIQLYLDKNRIQESMADIDADAFNHLKQLTDAGD 114

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           +L + G +              G++ +  ++  IL+ +  LPLP         + R++ R
Sbjct: 115 ILGVKGTIKRTEK---------GELSVYVKQYTILTKSL-LPLPDKWHGLTDVAKRYRQR 164

Query: 130 FLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVN 187
           ++DL  +  + +   +R +I   +R  +   +F+E  TP+L + +    AR F+      
Sbjct: 165 YVDLIVNPEVRQTFRRRAQITAGIRRYLEQRDFLEIETPVLQSEAGGADARPFITHHNTL 224

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           +   Y L  A + + + L+  GF++ F++   FR+E   +   P EF  +++  ++ + +
Sbjct: 225 EMELY-LRIATELHLKRLIVGGFEKVFELGRIFRNEGISTRHNP-EFTTIEVYQAYADYN 282

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTE 304
           D++   E ++  V +E           L+I Y         +  DL  P   + MH++ +
Sbjct: 283 DMMALTEGIITTVAQEVLGT-------LQITYQG-------EPIDLTPPWRRVTMHDLVK 328

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPA 331
            F   +F  F  +       +   IP 
Sbjct: 329 EFTGLDFNSFQTLEEAKTASKNAGIPG 355



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 458 ALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPL 494


>gi|196003370|ref|XP_002111552.1| hypothetical protein TRIADDRAFT_50208 [Trichoplax adhaerens]
 gi|190585451|gb|EDV25519.1| hypothetical protein TRIADDRAFT_50208 [Trichoplax adhaerens]
          Length = 547

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 115/258 (44%), Gaps = 22/258 (8%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCIDGL 76
           V ++G ++  R  G  +IF D+R      QV+A+         E+  ++R   ++   G 
Sbjct: 92  VSIAGRIYAKRASGQKLIFYDLRADSVKVQVMADARQCQQDFLEVNGNIRRGDIVGFKG- 150

Query: 77  VMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRR 135
                          G++ +   +  +LS     +P   FG ++  +  RF+ R+LDL  
Sbjct: 151 --------NPGKTKKGELSIIPTETTLLSPCLHMMPHLHFGVKD--KETRFRQRYLDLMI 200

Query: 136 DTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFY 192
           +++     V R +II  +R   +   F+E  TP++ A +    A+ F+   + +N   F 
Sbjct: 201 NSVSCSKFVTRAKIIEYIRRYFMNLGFLEVETPMMNAIAGGATAKPFITHHNDLNMDLFL 260

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y + L+  G  R F+I   FR+E       P E+   +  M+F +  D+++ 
Sbjct: 261 RI--APELYLKELVVGGLHRVFEIGKNFRNEGIDLTHNP-EYTSCEFYMAFADYTDLMSI 317

Query: 253 MENVLRGVFEEFSNGNTV 270
            E +L G+ +     + +
Sbjct: 318 TEQLLHGMVKSVRGSHQI 335


>gi|224126015|ref|XP_002329640.1| predicted protein [Populus trichocarpa]
 gi|222870521|gb|EEF07652.1| predicted protein [Populus trichocarpa]
          Length = 603

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 4/151 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R+LDL  ++  + I K R++II  ++  +   +F+E  TP++        AR 
Sbjct: 241 QETRYRQRYLDLMLNSEVRQIFKTRSKIIKYIQNFLDDLDFLEVETPMMNMIPGGAAARP 300

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           Y +  AP+ Y + L+  G DR ++I   FR+E       P EF   + 
Sbjct: 301 FKTHHNDLNMKLY-MRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTTCEF 358

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
            M++ + +D++   E +L G+ +E + G  +
Sbjct: 359 YMAYADYNDLMELTEKMLSGMVKELTGGYKI 389



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ MLL  ++N++EV LFP
Sbjct: 552 ALEYGLPPTGGWGLGIDRLAMLLTDSQNIKEVLLFP 587


>gi|212637922|ref|YP_002314442.1| lysyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212559402|gb|ACJ32457.1| Lysyl-tRNA synthetase (class II) [Anoxybacillus flavithermus WK1]
          Length = 494

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 124/285 (43%), Gaps = 29/285 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G   F  I+D  G  Q+    D      +EI  +     ++ + G V
Sbjct: 60  VSIAGRIMTKRGKGKAGFAHIQDLTGQIQIYVRKDDVGEEQYEIFDTSDLGDIVGVQGTV 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
                         G++ +     E+L+ +   LP    G ++  +  R++ R+LDL  +
Sbjct: 120 FKTKV---------GELSIKVHSYEMLTKSLRPLPEKYHGLKDIEQ--RYRQRYLDLIMN 168

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
               K  + R+ II SMR  +  + ++E  TP++ + +    AR F+        + Y +
Sbjct: 169 PESKKTFITRSLIIQSMRRYLDQKGYLEVETPMMHSIAGGAAARPFITHHNALDMTLY-M 227

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  G ++ ++I   FR+E   +   P EF  L++  ++ +  DI+   E
Sbjct: 228 RIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP-EFTMLELYEAYADYTDIMRLTE 286

Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY-GTD 289
           +++  + +E      +         + ++ R+   DAI+ Y G D
Sbjct: 287 DMIAHIAQEVLGTTKIQYGEHEVDLTPSWKRLHMVDAIKDYVGVD 331



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 454 ALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFP 489


>gi|145589653|ref|YP_001156250.1| lysyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189082962|sp|A4SYX2|SYK_POLSQ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|145048059|gb|ABP34686.1| lysyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 514

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY------RAFQCGMP 534
           +++L   G EIA+G    + +E     F      KE  +     +Y      RA + GMP
Sbjct: 421 RFELFITGREIANGFSELNDAEDQANRFRKQVEQKEAGDEE--AMYFDHDFIRALEYGMP 478

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG   GIDR+VMLL  A N+R+V LFP
Sbjct: 479 PTGGCGIGIDRLVMLLTDAPNIRDVILFP 507



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 122/279 (43%), Gaps = 24/279 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  I+D  G  Q   N + +  +   + +  W +   G  +S 
Sbjct: 69  VKVAGRMVLKRVMGKASFATIQDRSGQIQFYINDEISGADTHGAFK-HWDM---GDFISA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N   G++ +    + +LS +   PLP           +++ R++DL  +   +
Sbjct: 125 EGNLFKTN--KGELSVECSNLRLLSKSLR-PLPDKFHGLSDLETKYRQRYVDLIVNPESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           N  K R+  I S+R  M+  +F+E  TP+L    P GA  + F+          + L  A
Sbjct: 182 NTFKARSNAIASLRRHMLDADFMEVETPMLH-PIPGGATAKPFITHHNALDMQMF-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E ++
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDFTEGLI 298

Query: 258 RGVFEEFSNGNTV----------SNNFLRICYDDAIRRY 286
           R    + + G  V          S  F R+  ++AI +Y
Sbjct: 299 RAAAVD-AQGTAVLTHQGRELDLSKPFQRLTINEAILKY 336


>gi|134296299|ref|YP_001120034.1| lysyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166229801|sp|A4JFZ6|SYK_BURVG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|134139456|gb|ABO55199.1| lysyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 508

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 124/290 (42%), Gaps = 34/290 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q    P+    E   + + +W L    +V +R
Sbjct: 68  VSVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPNDVGAETYDAFK-KWDLG--DIVAAR 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-----R 134
                     T + ELS Q  E+  +A+ L PLP        + +R++ R++DL      
Sbjct: 125 -----GVLFRTNKGELSVQCKELRLLAKALRPLPDKFHGLADQEMRYRQRYVDLIVTPET 179

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           RDT       RT+ I+S+R  M   +F+E  TP+L        A+ F+          + 
Sbjct: 180 RDTFRA----RTKTISSIRRFMENADFMEVETPMLHPIPGGAAAKPFITHHNALDMQMF- 234

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           L  AP+ Y + L+  GF+R F+I   FR+E   PR +    EF  ++   ++ +   +++
Sbjct: 235 LRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHN---PEFTMMEFYAAYTDYRWLMD 291

Query: 252 TMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
             E ++R    +     T+         +  F R+    AI++Y     D
Sbjct: 292 FTEQLIRQAAIDALGTATIQYQGRELDLAKPFHRLTITQAIQKYAPQYTD 341



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFMTGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMFFDADYIRALEHGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|167536459|ref|XP_001749901.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771616|gb|EDQ85280.1| predicted protein [Monosiga brevicollis MX1]
          Length = 423

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 15/214 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G +   + +R+ G V  VR  G  + F D+ DH G  QV+ +       + +  +   + 
Sbjct: 97  GATAQDTQMRICGRVTSVRAMGKHLYFSDLEDHSGRIQVMCSKR----HLDEVSQQRLLH 152

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130
             D + +  S         TG+  L AQ + +++  + +LP  +    +  + +R ++ +
Sbjct: 153 RHDHIEVFGSP----GKTKTGEPTLKAQLVRVIAPCQAQLPDHI---EDKEKQVRERHIY 205

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQG 189
           L+   + L + +  R ++++++R      +F+E  TPIL+A S    AR F+  +   Q 
Sbjct: 206 LNTVDNDLRQTLKMRNQVLSTIREFFALRDFVEVETPILSAQSGGAIARPFITRANALQA 265

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             + L  AP+ Y + L+  G  R F+I   FR+E
Sbjct: 266 DLH-LRIAPELYLKRLVIGGLHRVFEIGKVFRNE 298



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A + G+PP  G   G+DR++M+L G  ++R+V  FP+
Sbjct: 374 QALEAGLPPTVGWGLGVDRVIMVLSGKPHIRDVLAFPI 411


>gi|125623258|ref|YP_001031741.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|166229809|sp|A2RIA0|SYK_LACLM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|124492066|emb|CAL96994.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070008|gb|ADJ59408.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 494

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 14/92 (15%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEV-----MLQAFSNVGISKEVVENRFGGL----YRAFQC 531
           +++L  NG E A     N  SE+      L+ F     +KE+ ++   G+      A + 
Sbjct: 405 RFELFINGKEYA-----NAFSELNDPIDQLERFEAQAKAKELGDDEATGVDYDYVEALEH 459

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP GG+  GIDR+VML  G  ++R+V LFP
Sbjct: 460 GMPPTGGLGIGIDRLVMLFTGTTSIRDVLLFP 491


>gi|253567191|ref|ZP_04844641.1| asparaginyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251944022|gb|EES84541.1| asparaginyl-tRNA synthetase [Bacteroides sp. 3_2_5]
          Length = 467

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 112/277 (40%), Gaps = 36/277 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     +   D G+ V + GWV   R    + F+ + D   I  V    D A F  E+ 
Sbjct: 6   RTKIVDLMKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQVVVDLANFDEEML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREY 120
           K + +   L ++G+        +  ++ TGQ  E+ A++IE+L   +   PL   G    
Sbjct: 66  KQITTGACLSVNGV--------LTESVGTGQKAEVQAREIEVLGTCDNTYPLQKKGH--- 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGAR 178
             S+ F      LR  T     V R R  +  ++      + F    TPI+TAS  EGA 
Sbjct: 115 --SMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAG 172

Query: 179 DFLVPSRVN--------QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221
                + +N         GS      F+    +     QL   L A+     +   P FR
Sbjct: 173 QMFQVTTMNLYDLKKDENGSIVYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            E+  + R   EF+ ++ E++F E  + ++  E  ++
Sbjct: 233 AENSNTPRHLAEFWMIEPEVAFNEIQENMDLAEEFIK 269


>gi|168033030|ref|XP_001769020.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679775|gb|EDQ66218.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 619

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 76/147 (51%), Gaps = 6/147 (4%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R+LDL  ++  +N+ K R+++I  +R  +   +F+E  TP++   +    A+ 
Sbjct: 247 QETRYRQRYLDLMLNSDIRNVFKTRSQVIRFVRRFLDERDFVEVETPMMNMIAGGAAAKP 306

Query: 180 FLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           F    + +N   F  +  AP+ Y + L+  G DR ++I   FR+E       P EF   +
Sbjct: 307 FKTHHNDLNMDLFMRI--APELYLKELIVGGLDRVYEIGKQFRNEGIDLTHNP-EFTACE 363

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFS 265
              ++ + DD++   E +L G+ +E +
Sbjct: 364 FYWAYADYDDLMKVTEEMLSGMVKEIT 390



 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 28/45 (62%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
           A + G+PP  G   GIDR  M+L  ++N++EV LFP  +   D++
Sbjct: 563 ALEYGLPPTAGWGMGIDRFTMMLTDSQNIKEVLLFPAMKPHEDVI 607


>gi|220903895|ref|YP_002479207.1| lysyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868194|gb|ACL48529.1| lysyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 503

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/290 (20%), Positives = 121/290 (41%), Gaps = 27/290 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCIDGLV 77
           V ++G +  +R  G ++F  I D  G  Q  A   + D A   + K +    ++ + G +
Sbjct: 67  VAIAGRIVSLRSFGKVVFFHIMDQTGRVQCYAAREHLDDATHSLVKKLDIGDIVGVSGHL 126

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                        TG++ ++ + I++++ +   PLP           R++ R++DL    
Sbjct: 127 FRTK---------TGELTIACRTIKLITRSMR-PLPEKYHGLKDMETRYRQRYVDLIVTP 176

Query: 138 LHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
             + I  KR++I+   R  M    F+E  TP++   +    A+ F           Y + 
Sbjct: 177 RAREIFFKRSQIVREFRHFMEDHGFMEVETPMMQPLAGGAAAKPFKTHHNALDMGLY-MR 235

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF++ F++   FR+E   +   P EF   +   ++   +D+++  E 
Sbjct: 236 IAPELYLKRLLVGGFEKVFELNRNFRNEGIDTRHNP-EFTMCEFYWAYATFEDLMDLTEK 294

Query: 256 VLRGVFEEFSNGNTV----------SNNFLRICYDDAIRRYGTDKPDLRN 295
           +   + +       V             + R+ + D++   G  +P+  N
Sbjct: 295 LFAHLAQTVCGTTVVPYQGEMIDLTPGKWTRMSFYDSLTVIGGHQPEFYN 344



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL  + ++REV LFP+
Sbjct: 461 RALEYGMPPAAGQGVGIDRLVMLLTDSASIREVILFPL 498


>gi|194289271|ref|YP_002005178.1| lysyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|254782472|sp|B3R478|SYK_CUPTR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|193223106|emb|CAQ69111.1| lysine tRNA synthetase, constitutive [Cupriavidus taiwanensis LMG
           19424]
          Length = 517

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 15/242 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q     D    E+  + +  W L   G ++S 
Sbjct: 77  VAIAGRMMLKRVMGKASFATVQDGSGQIQFYITRDKVGEEVYAAFK-HWDL---GDIISA 132

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E    N   G++ +  +++ +LS +   PLP        + ++++ R++DL      +
Sbjct: 133 RGELFRTN--KGELSVQVRELRLLSKSLR-PLPDKFHGLADQEMKYRQRYVDLIVSPETR 189

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  + RT  I+S+R  M    F+E  TP+L        A+ F+          + L  AP
Sbjct: 190 NTFRARTDAISSLRRHMADAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMF-LRIAP 248

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Y + L+  GF+R F+I   FR+E   PR +    EF  ++   ++ +   +++  E++
Sbjct: 249 ELYLKRLIVGGFERVFEINRNFRNEGVSPRHN---PEFTMMEFYAAYTDYRWLMDFTEDL 305

Query: 257 LR 258
           +R
Sbjct: 306 IR 307



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    + +E     F      K+  +     F   Y RA + GMPP 
Sbjct: 425 RFELFITGREIANGFSELNDAEDQADRFRKQVEQKDAGDEEAMYFDADYIRALEYGMPPT 484

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + N+R+V LFP
Sbjct: 485 GGCGIGIDRLVMLLTDSPNIRDVILFP 511


>gi|15672355|ref|NP_266529.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|38258400|sp|Q9CII7|SYK_LACLA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|12723244|gb|AAK04471.1|AE006274_5 lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|326405950|gb|ADZ63021.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 494

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 14/92 (15%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEV-----MLQAFSNVGISKEVVENRFGGL----YRAFQC 531
           +++L  NG E A     N  SE+      L+ F     +KE+ ++   G+      A + 
Sbjct: 405 RFELFINGKEYA-----NAFSELNDPIDQLERFEAQAKAKELGDDEATGVDYDYVEALEH 459

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP GG+  GIDR+VML  G  ++R+V LFP
Sbjct: 460 GMPPTGGLGIGIDRLVMLFTGTTSIRDVLLFP 491


>gi|15229833|ref|NP_187777.1| ATKRS-1 (ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 1); ATP binding
           / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleic
           acid binding / nucleotide binding [Arabidopsis thaliana]
 gi|55583786|sp|Q9ZPI1|SYK_ARATH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|6041823|gb|AAF02138.1|AC009918_10 lysyl-tRNA synthetase [Arabidopsis thaliana]
 gi|4325324|gb|AAD17333.1| lysyl-tRNA synthetase [Arabidopsis thaliana]
 gi|20466171|gb|AAM20403.1| lysyl-tRNA synthetase [Arabidopsis thaliana]
 gi|25083918|gb|AAN72134.1| lysyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332641565|gb|AEE75086.1| Lysyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 626

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 4/151 (2%)

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182
           R++ R LD+  +   + I + R +II+ +R  +  +NF+E  TP++   +    AR F+ 
Sbjct: 262 RYRQRHLDMILNVEVRQIFRTRAKIISYVRRFLDNKNFLEVETPMMNMIAGGAAARPFVT 321

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y +  AP+ Y + L+  G +R ++I   FR+E       P EF   +  M+
Sbjct: 322 HHNDLDMRLY-MRIAPELYLKQLIVGGLERVYEIGKQFRNEGIDLTHNP-EFTTCEFYMA 379

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           F + +D++   E +L G+ +E + G  +  N
Sbjct: 380 FADYNDLMEMTEVMLSGMVKELTGGYKIKYN 410



 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+ P GG   GIDR+ MLL  + N++EV  FP
Sbjct: 570 ALEYGLAPTGGWGLGIDRLSMLLTDSLNIKEVLFFP 605


>gi|302927399|ref|XP_003054489.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256735430|gb|EEU48776.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 530

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 20/250 (8%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL------CI 73
           + + G V   R  G  +IFLDI   +   QV+ N  S C    +  R ++ L        
Sbjct: 20  ISICGRVRSKRVVGKNLIFLDIVSEFERLQVMIN-RSKCLLDQEERRVKFSLFRNLIEVG 78

Query: 74  DGLVMSRSAETINANIIT--GQIELSAQKI-EILS-VAEELPLPVFGEREYPESIRFKYR 129
           D +     A  +     T  G++ + A+ + E+LS   E++P     E+      R + R
Sbjct: 79  DHIYAYSLAAVVGIPTRTKAGELTIEAKALPELLSPTMEQIP-----EKLTDPKTRMQDR 133

Query: 130 FLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVN 187
            +D+  +    ++++ R  I   MR  + ++ F+E  TPIL  ++    AR F+  +   
Sbjct: 134 HVDMLVNRQAIDVLRLRAEITKHMRDHLHSKRFLEFQTPILAENAGGAVARPFVTRATEF 193

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           +    AL  AP+ + + L+  G DR F+I P FR+E   +   P EF   +   ++   +
Sbjct: 194 KERDLALRIAPELWLKRLVIGGVDRVFEIGPAFRNEGVDATHNP-EFTMCEFYSAYSNLE 252

Query: 248 DILNTMENVL 257
           D++N  E +L
Sbjct: 253 DLINETEEIL 262


>gi|222087177|ref|YP_002545712.1| lysyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221724625|gb|ACM27781.1| lysyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 498

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 137/303 (45%), Gaps = 31/303 (10%)

Query: 2   HRYRTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +L          ++    V ++G V+  R  G  +F+DI D  G  Q+ ++
Sbjct: 36  HFHRTLTNAELTAKYEGLEPDTETTDVVTVAGRVYSSRNSG--MFMDIHDASGKIQIFSH 93

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D       +  R+   +   G ++  +   +      G++ ++AQ+I +L+ +  LP+P
Sbjct: 94  KDVT----GEDARALLPMIDIGDIIGVTG--VVRRTKRGELTINAQQITMLTKSL-LPMP 146

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL-TA 171
                     +R++ R LD+  +   K    +R+RI++ +R  M  + F+E  TP+L + 
Sbjct: 147 EKWHGLSDIELRYRKRHLDIMTNEESKLRFQQRSRIVSGIRRFMEDDGFMEVETPMLHSV 206

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRL 230
                A  F       +   Y L  AP+ + +  + SG  D+ F+I   FR+E   +   
Sbjct: 207 YGGATAEPFKTHHNTLKLDMY-LRIAPELFLKRTLVSGLTDKVFEINRNFRNEGVSTRHN 265

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVF------EEFSNGN---TVSNNFLRICYDD 281
           P EF  ++   ++ + +DI++ +E +   +        EF+ G+   +    F R+   D
Sbjct: 266 P-EFTMMECYWAYADYEDIMDLVERLFSTLAMSIHGSTEFAFGDKQISFKGPFRRVPMPD 324

Query: 282 AIR 284
           A++
Sbjct: 325 AVK 327



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 12/98 (12%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++  CN +E+ +           R  M E + QA +     KE+ E        A   G
Sbjct: 405 RFETYCNAWELGNAFSELNDPEEQRARMVEQLEQAHARGEKQKELDEE----FLDAIDQG 460

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR++MLL  + ++R++ LFP  +   D
Sbjct: 461 MPPAGGLGIGVDRLIMLLTNSPSIRDIILFPARRAKAD 498


>gi|190409062|gb|EDV12327.1| lysine-tRNA ligase [Saccharomyces cerevisiae RM11-1a]
 gi|207341689|gb|EDZ69675.1| YNL073Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 576

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
           + L   K+ I+    +LPLP    R   E+     R +D + +     +V R RII  +R
Sbjct: 183 LSLICNKLPIVLSVSQLPLP---SRLNDETKIKSNRVVDYQLNGTQTLLV-RARIIKLLR 238

Query: 154 CRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
             +   NF+E  TPIL++ S    A+ F+  S+        L  AP+ + + L+ SG  +
Sbjct: 239 KFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDHLELRIAPELWLKRLIISGLQK 296

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            ++I   FR+E   S     EF  L+   +++  DDI+   E++ +
Sbjct: 297 VYEIGKVFRNEGIDSTH-NAEFSTLEFYETYMSMDDIVTRTEDLFK 341


>gi|149183582|ref|ZP_01862003.1| lysyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848698|gb|EDL62927.1| lysyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 405

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 89/183 (48%), Gaps = 7/183 (3%)

Query: 92  GQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRII 149
           G++ + A++  +L+ A   LP    G ++  +  R++ R+LDL      K   + R++II
Sbjct: 35  GELSIKAKEFILLTKALRPLPEKFHGLKDVEQ--RYRQRYLDLITSQESKQTFIARSKII 92

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            SMR  +    ++E  TP++ A +    AR F+          Y +  A + + + L+  
Sbjct: 93  QSMRRYLDNNGYLEVETPMMHAIAGGASARPFITHHNALDMQLY-MRIAIELHLKRLIVG 151

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           G ++ ++I   FR+E   +   P EF  +++  ++ +  DI+   EN++  + +E     
Sbjct: 152 GLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYRDIMALTENLIAHIAKEVFGST 210

Query: 269 TVS 271
           TV 
Sbjct: 211 TVQ 213



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 30/40 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP+ ++
Sbjct: 364 ALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPLMRH 403


>gi|323335817|gb|EGA77096.1| Msk1p [Saccharomyces cerevisiae Vin13]
          Length = 517

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
           + L   K+ I+    +LPLP    R   E+     R +D + +     +V R RII  +R
Sbjct: 124 LSLICNKLPIVLSVSQLPLP---SRLNDETKIKSNRVVDYQLNGTQTLLV-RARIIKLLR 179

Query: 154 CRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
             +   NF+E  TPIL++ S    A+ F+  S+        L  AP+ + + L+ SG  +
Sbjct: 180 KFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDHLELRIAPELWLKRLIISGLQK 237

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            ++I   FR+E   S     EF  L+   +++  DDI+   E++ +
Sbjct: 238 VYEIGKVFRNEGIDSTH-NAEFSTLEFYETYMSMDDIVTRTEDLFK 282


>gi|298480190|ref|ZP_06998388.1| asparagine--tRNA ligase [Bacteroides sp. D22]
 gi|298273471|gb|EFI15034.1| asparagine--tRNA ligase [Bacteroides sp. D22]
          Length = 467

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 108/274 (39%), Gaps = 30/274 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L  +D+G+ V + GWV   R    + F+ + D   I  +    D A F+    
Sbjct: 6   RTKIVDLLKRTDIGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNLQIVVDLANFD---- 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPES 123
                 L   G  +S + E + +     ++E+ A++IE+L   +   PL   G      S
Sbjct: 62  -EEMLKLITTGACISVNGEMVESVGSGQKVEVQAREIEVLGTCDNTYPLQKKGH-----S 115

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + F      LR  T     V R R  +  ++      + F    TPI+TAS  EGA    
Sbjct: 116 MEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQMF 175

Query: 182 VPSRVN--------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDED 224
             + +N              +  F+    +     QL   L A+     +   P FR E+
Sbjct: 176 QVTTMNLYDLKKDERGSISYEDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRAEN 235

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             + R   EF+ ++ E++F +  D ++  E  ++
Sbjct: 236 SNTPRHLAEFWMIEPEVAFNDITDNMDLAEEFIK 269


>gi|207725250|ref|YP_002255646.1| lysyl-trna synthetase (lysine--trna ligase) (lysrs) protein
           [Ralstonia solanacearum MolK2]
 gi|206590484|emb|CAQ37446.1| lysyl-trna synthetase (lysine--trna ligase) (lysrs) protein
           [Ralstonia solanacearum MolK2]
          Length = 490

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 123/284 (43%), Gaps = 22/284 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q     D    E+  + +  W L   G +++ 
Sbjct: 50  VAIAGRMMLKRVMGKASFATVQDGSGQIQFYITRDRVGEEVYAAFK-HWDL---GDIIAA 105

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N   G++ +  Q++ +LS +   PLP        + ++++ R++DL      +
Sbjct: 106 RGVLFRTN--KGELSVQVQELRLLSKSLR-PLPDKFHGLADQEMKYRQRYVDLIVSPETR 162

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  + RT+ I S+R  M    F+E  TP+L        A+ F+          + L  AP
Sbjct: 163 NTFRARTKAIASLRRHMGDAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMF-LRIAP 221

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R ++I   FR+E   S R   EF  ++   ++ +   +++  EN++R
Sbjct: 222 ELYLKRLIVGGFERVYEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDYTENLIR 280

Query: 259 GVFEEFSNGNTV----------SNNFLRICYDDAIRRYGTDKPD 292
               + + G+ V          S  F R+    AI++Y     D
Sbjct: 281 QAAID-ATGSAVLNYQGRELDLSKPFHRLTIAQAIQKYAPQYTD 323



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E   + F      K+  +     +   Y RA + GMPP 
Sbjct: 398 RFELFITGREIANGFSELNDPEDQAERFRKQVEQKDAGDEEAMYYDADYIRALEYGMPPT 457

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + N+R+V LFP
Sbjct: 458 GGCGIGIDRLVMLLTDSPNIRDVILFP 484


>gi|67536760|ref|XP_662154.1| hypothetical protein AN4550.2 [Aspergillus nidulans FGSC A4]
 gi|40741703|gb|EAA60893.1| hypothetical protein AN4550.2 [Aspergillus nidulans FGSC A4]
 gi|259482620|tpe|CBF77275.1| TPA: aspartyl-tRNA synthetase Dps1, putative (AFU_orthologue;
           AFUA_2G02590) [Aspergillus nidulans FGSC A4]
          Length = 555

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 88/209 (42%), Gaps = 25/209 (11%)

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-GEREYPES----- 123
           ++ + G+V        +A +   +I +    + I   A++LP+ V   ER  PE+     
Sbjct: 151 IVQVTGIVKKPGVPIASATLSNHEIHIRKVYM-IAEAAQQLPMQVKDAERPLPETTEEGF 209

Query: 124 ---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC-----STPIL 169
                    +  K R LD R   L     +    I+S    + AE  I+      STP L
Sbjct: 210 QVDSDGAPIVTLKTR-LDNRVLDLQTATSQAITWISSGVAELFAEYMIKSGSRWISTPKL 268

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             ++ EG           + ++ A  Q+PQ YKQ+ +A      F+IAP FR E+  + R
Sbjct: 269 VGAATEGGSGVFEVKYFKRNAYLA--QSPQLYKQMCIAGDMQSVFEIAPVFRAEESNTHR 326

Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVL 257
              EF  LD E +F     ++L   E +L
Sbjct: 327 HLTEFTGLDFEKTFSSHYHEVLEFAEQLL 355



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H  + +  +    G++    +  F     AF+ G PPH G   
Sbjct: 468 YDFFMRGEEIMSGAQRIHDVKELEASMIAKGVNPN--QEGFEDYLAAFRQGCPPHAGGGL 525

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIVM  LG  N+R  +LFP
Sbjct: 526 GLNRIVMFFLGLPNIRLATLFP 547


>gi|332978485|gb|EGK15197.1| lysine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 508

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 15/175 (8%)

Query: 125 RFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFL 181
           R++ R LDL  +   +N  + R+++I+ +R  M+ E F+E  TP++    P GA  R F+
Sbjct: 168 RYRNRHLDLMTNEDSRNTFLIRSKVISGIRKFMLNERFMEVETPMM-HPIPGGAVARPFI 226

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   
Sbjct: 227 THHNALDMPLY-LRIAPELYLKRLVVGGFERVFEINRSFRNEGVSTRHNP-EFTMIEFYQ 284

Query: 242 SFVEQDDILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIRRYG 287
           ++ +  D+++  E +         G  E       +S    F R+   DAI +Y 
Sbjct: 285 AYADYKDLMDLTERLFNELATDILGTTELTYQDENISFKAPFARLSMKDAIAQYA 339



 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +      + F N    K+  ++    F   Y  A   G+PP 
Sbjct: 416 RFELFIGGREIANGFSELNDPADQAERFHNQVAEKDAGDDEAMHFDADYIEALSYGLPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML   A ++R+V LFP
Sbjct: 476 AGEGIGIDRLVMLFTDAASIRDVILFP 502


>gi|258648093|ref|ZP_05735562.1| lysine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260851957|gb|EEX71826.1| lysine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 578

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 129/290 (44%), Gaps = 24/290 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G   F +++D  G  QV    D  C    K + +     +  L      
Sbjct: 57  IAGRLMSRRVMGKASFAELQDSKGRIQVYITRDDICPSEDKELYNVVFKKLLDLGDFIGV 116

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYRFLDLR 134
           E       TG+I + AQK+  LS +   PLPV  E++         PE +R++ R++DL 
Sbjct: 117 EGYVFRTQTGEISVHAQKLTFLSKSIR-PLPVVKEKDGEVYDGFSDPE-LRYRQRYVDLI 174

Query: 135 RD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +  + +   KR+ II ++R  +    + E  TPIL   +    AR F+          Y
Sbjct: 175 VNPDVKETFRKRSIIIKTLRDALDEAGYTEVETPILQPIAGGASARPFITHHNSLDIDLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ + + + + +++ 
Sbjct: 235 -LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-EFTCMELYVQYKDYNWMMSF 292

Query: 253 MENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR-RYGTDKPD 292
            E++L        G  E   +G T+S    + R+   +AIR + G D  D
Sbjct: 293 TESLLERICIAVNGSTETVIDGKTISFKAPYRRLPILEAIREKTGYDLSD 342



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 15/86 (17%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD---------LLMGSPS 577
           RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP  +   +           +G P 
Sbjct: 460 RALQYGMPPTSGIGIGIDRLVMLMTGQSYIQEVLLFPTMRPEKNPPRDAVSAYTAIGIPE 519

Query: 578 TVSVEQLRELGLRIVEN-----PKKI 598
            V V  L++LG  +V N     P+KI
Sbjct: 520 DV-VPVLQKLGYNLVSNLAEEKPQKI 544


>gi|288941014|ref|YP_003443254.1| lysyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896386|gb|ADC62222.1| lysyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 505

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 20/245 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V+L+G +   R  G   F  I+D     QV    D    E     + E     ++ ++G 
Sbjct: 67  VKLAGRLMTRRVMGKASFAHIQDMSARIQVFVQRDQVGEETYDHFKRELDLGDIIGVEGQ 126

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V             TG++ +    + +L+ A   PLP           R++ R+LDL  +
Sbjct: 127 VFKTK---------TGELSVRCDSLRLLTKALR-PLPEKFHGLTDMESRYRQRYLDLIMN 176

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           T  ++  + RT I+  +R  +    ++E  TP++    P GA  R F+          + 
Sbjct: 177 TGTRDTFRVRTAIVQFIRDYLNGRGYLEVETPMMQVI-PGGAVARPFITHHNALDMQLF- 234

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ + + L+  GF++ ++I   FR+E   +   P EF  L+   ++ +  D+++  
Sbjct: 235 LRIAPELFLKRLVVGGFEKVYEINRNFRNEGLSTRHNP-EFTMLEFYEAYADYHDLMDLT 293

Query: 254 ENVLR 258
           E++LR
Sbjct: 294 EDMLR 298



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    + +E   + F      KE  +     +   Y RA + G+PP 
Sbjct: 412 RFELFVGGREIANGFSELNDAEDQAERFRAQVAEKEAGDQEAMYYDADYVRALEHGLPPT 471

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML   + ++R+V LFP
Sbjct: 472 AGEGIGIDRLVMLFTDSPSIRDVLLFP 498


>gi|237719082|ref|ZP_04549563.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229451461|gb|EEO57252.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 467

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 108/274 (39%), Gaps = 30/274 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L  +D+G+ V + GWV   R    + F+ + D   I  +    D A F+    
Sbjct: 6   RTKIVDLLKRTDIGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNLQIVVDLAGFD---- 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPES 123
                 L   G  +S + E + +     ++E+ A++IE+L   +   PL   G      S
Sbjct: 62  -EEMLKLITTGACISVNGEMVESVGSGQKVEVQAREIEVLGTCDNTYPLQKKGH-----S 115

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + F      LR  T     V R R  +  ++      + F    TPI+TAS  EGA    
Sbjct: 116 MEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQMF 175

Query: 182 VPSRVN--------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDED 224
             + +N              +  F+    +     QL   L A+     +   P FR E+
Sbjct: 176 QVTTMNLYDLKKDERGSISYEDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRAEN 235

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             + R   EF+ ++ E++F +  D ++  E  ++
Sbjct: 236 SNTPRHLAEFWMIEPEVAFNDITDNMDLAEEFIK 269


>gi|194756652|ref|XP_001960590.1| GF11428 [Drosophila ananassae]
 gi|190621888|gb|EDV37412.1| GF11428 [Drosophila ananassae]
          Length = 460

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 127/326 (38%), Gaps = 52/326 (15%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           S  G  + + GW+  VR      FLDI D  G T       S  F++      E      
Sbjct: 21  SKPGDSLSIQGWIRNVRKLKSHTFLDIND--GST-------STKFQVVVPKTPENQHLAP 71

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGEREYPESIRFKYRFL 131
           G V+S   +   A    G  EL A  +E L+   + E  P     ++  PE +R ++  L
Sbjct: 72  GSVISAEGQIQVAP--NGSYELHASHVETLADGHLQEGYPF-APKQKLPPEYVR-EHLHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPSRVNQG 189
             R D +   +  R +   ++   M   +F++ +TP+LT +  EGA +   + P      
Sbjct: 128 RSRVDYIAAQMRIRHKAQKAIHDYMDELDFVQINTPLLTTNDCEGAGEVFRVQPDSEALL 187

Query: 190 SFYALPQAP--QQY---KQLL----------MASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
              A P  P  Q Y   K  L          M  G    +  +P FR E+ +S     EF
Sbjct: 188 KTMAKPNVPAEQSYFDEKVFLSVSGQLHLEAMTYGLGNTYTFSPAFRAENSKSPLHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNT-MENVLRGVFEEFSNGNTVSNNFLR----------------- 276
           Y  + E+S +++ D L   +E +L+ +       ++   NF +                 
Sbjct: 248 YMFEAELSHLKEVDKLAAFIEQMLKSITTRLLESSSDDLNFCQRNANASSDLAWLNVPWK 307

Query: 277 -ICYDDAIRRYGTDKPDLRNPIIMHN 301
              YD+A++    +   L+ PI + +
Sbjct: 308 IASYDEALQILQDNADSLKTPISIQD 333


>gi|46117424|ref|XP_384730.1| hypothetical protein FG04554.1 [Gibberella zeae PH-1]
          Length = 575

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 8/135 (5%)

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R  + + I   R  +    R  +   +F E   P L  ++ EG  +        + +F 
Sbjct: 246 KRTPVQQAIADIRIEVKRLFRNYLEPRHFKEFEPPCLIGAASEGGGNVFRLPYFGEEAFL 305

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM----SFVEQDD 248
           A  Q+PQ YKQ  +A G +R F   P FR E+  + R   EF  LD+EM    S++E  D
Sbjct: 306 A--QSPQFYKQFEIAGGRERVFSSGPVFRAENSNTPRHMTEFTGLDLEMEIKDSYLEVLD 363

Query: 249 ILN-TMENVLRGVFE 262
           +L   + ++LRG+ E
Sbjct: 364 VLEGVLLSILRGIHE 378


>gi|261492017|ref|ZP_05988592.1| asparagine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494570|ref|ZP_05991052.1| asparagine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261309761|gb|EEY10982.1| asparagine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312300|gb|EEY13428.1| asparagine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 467

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 117/291 (40%), Gaps = 44/291 (15%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSA 57
           M ++ T S    G   VG    + GWV   R    G+ FL + D   +   Q + N D  
Sbjct: 1   MSKFPTVSEILSGKIAVGEEATVRGWVRTRRDSKAGLSFLSVYDGSCFDPIQAIINNDLP 60

Query: 58  CFEIAKSVR--SEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLP 113
            +  A+ +R  +   + + G V+   AE        GQ +EL A K+E+L   E+    P
Sbjct: 61  NYN-AEVLRLTAGCSVVVTGKVVESPAE--------GQAVELQASKVEVLGWVEDPDTYP 111

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTA 171
           +  +R    SI +      LR  T     V R R  +  ++      + F   +TP++TA
Sbjct: 112 MAAKRH---SIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPVITA 168

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFD 211
           S  EGA +     RV+      LP+                       Q      A    
Sbjct: 169 SDTEGAGEMF---RVSTLDLENLPRGENGKVDFNQDFFGKESFLTVSGQLNAETYACALS 225

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + +   P FR E+  + R   EF+ ++ E++F + +D     E++L+ VF+
Sbjct: 226 KVYTFGPTFRAENSNTTRHLAEFWMMEPEVAFADLNDNAKLAEDMLKYVFK 276



 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 7/83 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF-QCGMPPHGGIA 540
           D++  G  EI  G  R    EV+ Q  + +G++ E         YR   + G  PH G  
Sbjct: 382 DVLAPGIGEIIGGSQREERLEVLDQRMNEMGLNPEDY-----WWYRDLRKYGTVPHSGFG 436

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            G +R+++ + G +N+R+V  FP
Sbjct: 437 LGFERLIVYVTGLQNIRDVIPFP 459


>gi|116511230|ref|YP_808446.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|122940346|sp|Q031U8|SYK_LACLS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116106884|gb|ABJ72024.1| Lysyl-tRNA synthetase (class II) [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 494

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 14/92 (15%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEV-----MLQAFSNVGISKEVVENRFGGL----YRAFQC 531
           +++L  NG E A     N  SE+      L+ F     +KE+ ++   G+      A + 
Sbjct: 405 RFELFINGKEYA-----NAFSELNDPIDQLERFEAQAKAKELGDDEATGVDYDYVEALEH 459

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP GG+  GIDR+VML  G  ++R+V LFP
Sbjct: 460 GMPPTGGLGIGIDRLVMLFTGTTSIRDVLLFP 491


>gi|134097022|ref|YP_001102683.1| lysyl-tRNA synthetase class II [Saccharopolyspora erythraea NRRL
           2338]
 gi|291006232|ref|ZP_06564205.1| lysyl-tRNA synthetase class II [Saccharopolyspora erythraea NRRL
           2338]
 gi|133909645|emb|CAL99757.1| lysyl-tRNA synthetase class II [Saccharopolyspora erythraea NRRL
           2338]
          Length = 507

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 7/191 (3%)

Query: 85  INANIITGQI-ELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-RRDTLHKN 141
           ++  +IT +  ELS    E    A+ L PLPV   +E  +  R + R++DL  R      
Sbjct: 129 VHGEVITSRRGELSVMADEWRLAAKTLRPLPV-AHKELGDETRVRQRYVDLIVRKQAADT 187

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           +  R  +  S+R       FIE  TP+L T      AR F+  S       Y L  AP+ 
Sbjct: 188 VRTRATVQRSLRDSFQRRGFIEVETPMLQTLHGGAAARPFVTHSNAFDMELY-LRIAPEL 246

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y +  +  G ++ F+I   FR+E   S   P EF  L+   ++ + D +      +++  
Sbjct: 247 YLKRCVVGGIEKVFEINRNFRNEGSDSSHSP-EFAMLEFYQAYSDYDGMARLTRQLVQEA 305

Query: 261 FEEFSNGNTVS 271
            E  +    V+
Sbjct: 306 AEALTGSQVVT 316



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 13/94 (13%)

Query: 479 AFQYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           A ++DL   GFE+A+G          R  + E    A S    +  V E+      RA +
Sbjct: 415 AEKWDLYTRGFELATGYSELVDPVVERARLEEQARLAASGDEEAMHVDED----FLRALE 470

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GMPP GG+  GIDR++M L G   +RE  LFP+
Sbjct: 471 YGMPPSGGVGMGIDRLLMALTGL-GIRETILFPL 503


>gi|46128767|ref|XP_388937.1| hypothetical protein FG08761.1 [Gibberella zeae PH-1]
          Length = 610

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 122/262 (46%), Gaps = 20/262 (7%)

Query: 19  SFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPD-----SACFEIA-KSVRSEWVL 71
             +++   VH  R  G  ++F D+R      Q++         +  FE   + +R   ++
Sbjct: 124 KIIQIGARVHGKRASGAKLLFYDVRTEGVKVQIMCQAQEVREGAPSFEDQHEHLRRGDII 183

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRF 130
            I G     + +T       G++ + A ++ +L+     LP   +G ++  +  R++ R+
Sbjct: 184 GIIGYPGRTAPKTKIEKGEEGELSIFATEVVLLTPCLHALPDDHYGFKDLEQ--RYRKRY 241

Query: 131 LDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDL  +   +N+ + R+++I  +R      +F+E  TP++   +  GA      +  N+ 
Sbjct: 242 LDLICNEKARNVFITRSKMITWIRKYFDERDFVEVETPMMNQIAG-GATAKPFTTHHNE- 299

Query: 190 SFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Y +P     AP+ Y ++L+  G +R ++I   FR+E       P EF  ++   ++ +
Sbjct: 300 --YDMPMFMRVAPELYLKMLVVGGLNRVYEIGRQFRNEGADLTHNP-EFTTIEFYEAYAD 356

Query: 246 QDDILNTMENVLRGVFEEFSNG 267
            +D++ T E ++ G+ +  + G
Sbjct: 357 VNDLMKTTEEMISGLVKYLTGG 378



 Score = 40.4 bits (93), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + + G+PP GG   GIDR+VM L     +REV  FP  ++
Sbjct: 544 SLEYGLPPTGGWGMGIDRMVMFLTDNYTIREVLTFPFMKD 583


>gi|301300314|ref|ZP_07206521.1| lysine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852087|gb|EFK79764.1| lysine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 495

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 112/242 (46%), Gaps = 15/242 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G + F D++D  G  Q+    D    E+    +   +    G  +  + 
Sbjct: 63  IAGRMVAKRGKGKVGFADLQDKTGRMQLYIRKDEVGEEMYHIFKRSDL----GDFLGVTG 118

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRDTLH 139
           + I  ++  G++ +   K+  LS A   PLP  F   +  E I ++ R+LDL   R++ +
Sbjct: 119 DVIKTDM--GELTIKVTKLTFLSKALR-PLPDKFHGLQNVEQI-YRQRYLDLITNRESYN 174

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  V R++I+ ++R  + +  F+E  TP+L   +    AR F+          Y L  A 
Sbjct: 175 R-FVNRSKIVIAVRNYLDSNGFLEVETPVLHNQAGGAAARPFITHHNALDIQLY-LRIAL 232

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+  G +R ++I   FR+E   +   P EF  L+   ++ +  D+++  E + +
Sbjct: 233 ELHLKRLIVGGMERVYEIGRVFRNEGIDTKHNP-EFTMLETYAAYFDFKDVMDETEGIFK 291

Query: 259 GV 260
             
Sbjct: 292 AA 293



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 8/52 (15%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GI ++ +E        A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 447 GIDEDYIE--------AMEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 490


>gi|254362094|ref|ZP_04978216.1| asparagine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153093653|gb|EDN74612.1| asparagine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 467

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 112/288 (38%), Gaps = 38/288 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSA 57
           M ++ T S    G   VG    + GWV   R    G+ FL + D   +   Q + N D  
Sbjct: 1   MSKFPTVSEILSGKIAVGEEATVRGWVRTRRDSKAGLSFLSVYDGSCFDPIQAIINNDLP 60

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFG 116
            +       +E +    G  +  + + + +      +EL A K+E+L   E+    P+  
Sbjct: 61  NY------NAEVLHLTAGCSVVVTGKVVESPAEGQAVELQASKVEVLGWVEDPDTYPMAA 114

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSP 174
           +R    SI +      LR  T     V R R  +  ++      + F   +TP++TAS  
Sbjct: 115 KRH---SIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPVITASDT 171

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYF 214
           EGA +     RV+      LP+                       Q      A    + +
Sbjct: 172 EGAGEMF---RVSTLDLENLPRGENGKVDFNQDFFGKESFLTVSGQLNAETYACALSKVY 228

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
              P FR E+  + R   EF+ ++ E++F + +D     E++L+ VF+
Sbjct: 229 TFGPTFRAENSNTTRHLAEFWMMEPEVAFADLNDNAKLAEDMLKYVFK 276



 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 7/83 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF-QCGMPPHGGIA 540
           D++  G  EI  G  R    EV+ Q  + +G++ E         YR   + G  PH G  
Sbjct: 382 DVLAPGIGEIIGGSQREERLEVLDQRMNEMGLNPEDY-----WWYRDLRKYGTVPHSGFG 436

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            G +R+++ + G +N+R+V  FP
Sbjct: 437 LGFERLIVYVTGLQNIRDVIPFP 459


>gi|313899864|ref|ZP_07833367.1| lysine--tRNA ligase [Clostridium sp. HGF2]
 gi|312955479|gb|EFR37144.1| lysine--tRNA ligase [Clostridium sp. HGF2]
          Length = 502

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 30/278 (10%)

Query: 2   HRY-RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           H Y RTH  G++           + +    V+++G +   R  G   F+ I+D  G  Q+
Sbjct: 36  HAYQRTHKSGEIRAAYEDCTKEELEEKDLTVKIAGRIMTKRRQGKAGFMHIQDIDGQIQI 95

Query: 51  VANPD---SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
               D      +E+ K      ++ I+G VM  +          G++ + A+    L+ A
Sbjct: 96  YVRKDVIGEEAYEVFKKSDLGDIVGIEGKVMKTNH---------GELSVKAEVYTHLTKA 146

Query: 108 -EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECS 165
              LP    G ++  E  RF+ R++DL  +   K I + R RII +++  +  E  +E  
Sbjct: 147 LRPLPEKYHGLQDVEE--RFRRRYVDLITNENSKRIALTRPRIIRAIQNYLDGEGLVEVE 204

Query: 166 TPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
           TP+L        AR F+         FY L  A +   + L+  G +  ++I   FR+E 
Sbjct: 205 TPVLQPILGGASARPFVTHHNTLDMPFY-LRIATELPLKRLIVGGLEGVYEIGRLFRNEG 263

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             +   P EF  ++  +++ +   +++ +E +L  V E
Sbjct: 264 MDATHNP-EFTTVEAYVAYSDLSGMMDLVEGLLNHVAE 300



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL  ++ +REV LFP
Sbjct: 461 ALEYGLPPTGGVGLGIDRLVMLLTNSQTIREVLLFP 496


>gi|325108690|ref|YP_004269758.1| Lysyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324968958|gb|ADY59736.1| Lysyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 500

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 118/245 (48%), Gaps = 17/245 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74
           G  VR++  +   R  G + F D++D  G  Q++    +     +E+  ++    ++ ID
Sbjct: 55  GPTVRIAARIMTRRKAGKLRFFDVKDATGRIQLLFSRGDLSETQWELMGNLDLGDLIGID 114

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G V+ R+         +G++ +  Q++ +L  +   P   F   +  E +  + R +DL 
Sbjct: 115 G-VLRRTQ--------SGEVSIFVQELTVLCKSLAQPPEKFHGAKDIEML-LRQRSIDLI 164

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
             D +   +++R++II+S+R  +  +N++E  TP+L A +    AR F+          Y
Sbjct: 165 YNDGVLDRMLQRSKIIDSVRQTLRGQNYVEAETPVLHAVAGGAAARPFITHHNALDIELY 224

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + + + L+  G ++ +++   FR+E   +   P EF  +++  ++   + +++ 
Sbjct: 225 -LRIALELHLKRLLVGGVEKVYELGRVFRNEGIDATHNP-EFTMIEIYQAYGNYETMMDL 282

Query: 253 MENVL 257
            E ++
Sbjct: 283 TEAIV 287



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 3/89 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV--GISKEVVENRFGGLY-RAFQCGMPP 535
           A +++L   G E+A+     +  ++  + F     G+S+E    +    + +A + GMPP
Sbjct: 399 AERFELYVKGMELANAYTELNDPKLQEELFLTQLDGLSEEDSMAKMDTDFVKALKVGMPP 458

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GG+  GIDR+VMLL  ++++R+V  FP+
Sbjct: 459 AGGLGIGIDRLVMLLTNSRSIRDVIYFPL 487


>gi|254552712|ref|ZP_05143159.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
          Length = 462

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 5/155 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           PLPV   +E  E  R + R++DL      + + + R  ++ ++R  +    F+E  TP+L
Sbjct: 147 PLPV-AHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVL 205

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T +    AR F   S       Y L  AP+ + +  +  GFD+ F++   FR+E   S 
Sbjct: 206 QTLAGGAAARPFATHSNALDIDLY-LRIAPELFLKRCIVGGFDKVFELNRVFRNEGADST 264

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
             P EF  L+   ++   DD       +++ V +E
Sbjct: 265 HSP-EFSMLETYQTYGTYDDSAVVTRELIQEVADE 298


>gi|19703392|ref|NP_602954.1| asparaginyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|22096189|sp|Q8RH70|SYN_FUSNN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|19713460|gb|AAL94253.1| Asparaginyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 461

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/304 (21%), Positives = 119/304 (39%), Gaps = 51/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV ++R      F+++ D   +   Q+V       F+    +     + + G ++
Sbjct: 19  IELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSIASTIKVKGTLV 78

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                       +GQ +E+ A+KIEI   A+ L  P+  +R   E +R K   L  R +T
Sbjct: 79  KSEG--------SGQDLEVKAKKIEIFQKAD-LEYPLQNKRHTFEYLRTKAH-LRARTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVN- 187
                  R+ +  ++       NF     PI+T S  EGA +           VP + N 
Sbjct: 129 FSAVFRVRSVLAYALHKFFQENNFAYVHAPIITGSDAEGAGEMFRITTLDLNKVPKKENG 188

Query: 188 ----QGSFYALPQAPQQYKQLLMAS---GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+          QL + +    F   +   P FR E   + R   EF+ ++ E
Sbjct: 189 EVDFSKDFFGKSTNLTVSGQLNLETFCAAFRNVYTFGPTFRAEYSNTARHASEFWMVEPE 248

Query: 241 MSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLRICY 279
           ++F +   ++   E +++ + +          EF N            N ++N+F R+ Y
Sbjct: 249 IAFGDIFALMELAEAMVKYIIKYVMDNCPEEMEFFNSFIEKGLFDKLNNVLNNDFGRVTY 308

Query: 280 DDAI 283
            +AI
Sbjct: 309 TEAI 312



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 15/91 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  EI  G  R    E++ +    +G+++E  E      RFG           PH
Sbjct: 376 DLLAPGIGEIIGGSQREDNYELLTKRMKELGLNEEDYEFYLDLRRFGSF---------PH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R++M L G +N+R+V  FP + N
Sbjct: 427 SGYGLGFERMMMYLTGMQNIRDVIPFPRTPN 457


>gi|323307440|gb|EGA60714.1| Msk1p [Saccharomyces cerevisiae FostersO]
          Length = 384

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
           + L   K+ I+    +LPLP    R   E+     R +D + +     +V R RII  +R
Sbjct: 144 LSLICNKLPIVLSVSQLPLP---SRLNDETKIKSNRVVDYQLNGTQTLLV-RARIIKLLR 199

Query: 154 CRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
             +   NF+E  TPIL++ S    A+ F+  S+        L  AP+ + + L+ SG  +
Sbjct: 200 KFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDHLELRIAPELWLKRLIISGLQK 257

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            ++I   FR+E   S     EF  L+   +++  DDI+   E++ +
Sbjct: 258 VYEIGKVFRNEGIDSXH-NAEFSTLEFYETYMSMDDIVXRTEDLFK 302


>gi|6324256|ref|NP_014326.1| Msk1p [Saccharomyces cerevisiae S288c]
 gi|1351160|sp|P32048|SYKM_YEAST RecName: Full=Lysyl-tRNA synthetase, mitochondrial; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS; Flags: Precursor
 gi|791113|emb|CAA60187.1| lysine--tRNA ligase [Saccharomyces cerevisiae]
 gi|1301959|emb|CAA95947.1| MSK1 [Saccharomyces cerevisiae]
 gi|285814578|tpg|DAA10472.1| TPA: Msk1p [Saccharomyces cerevisiae S288c]
          Length = 576

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
           + L   K+ I+    +LPLP    R   E+     R +D + +     +V R RII  +R
Sbjct: 183 LSLICNKLPIVLSVSQLPLP---SRLNDETKIKSNRVVDYQLNGTQTLLV-RARIIKLLR 238

Query: 154 CRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
             +   NF+E  TPIL++ S    A+ F+  S+        L  AP+ + + L+ SG  +
Sbjct: 239 KFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDHLELRIAPELWLKRLIISGLQK 296

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            ++I   FR+E   S     EF  L+   +++  DDI+   E++ +
Sbjct: 297 VYEIGKVFRNEGIDSTH-NAEFSTLEFYETYMSMDDIVTRTEDLFK 341


>gi|320353044|ref|YP_004194383.1| lysyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320121546|gb|ADW17092.1| lysyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 495

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 21/263 (7%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLC 72
           D G   R++G V  +R  G   F  ++D     Q+ A  D      +++ K      ++ 
Sbjct: 53  DSGHSYRVAGRVMSMRKFGKAAFFHLQDASERLQIYARRDLLGEEVYDLFKKWDVGDIVG 112

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           ++G +             TG++ L A  +++++ +   PLP           R++ R+LD
Sbjct: 113 VEGRLFKTK---------TGELSLEATTLQMITKSLR-PLPEKFHGLTDVETRYRQRYLD 162

Query: 133 LRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           L  +   + + K R  II  +R  +    ++E  TP++    P GA     P R +  + 
Sbjct: 163 LIVNPEAREVFKKRVEIIRLIREFLNNRGYMEVETPMM-QPVPGGAT--AKPFRTHHNAL 219

Query: 192 ---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
                L  AP+ Y + L+  GF++ F+I   FR+E   S R   EF  L+   ++    D
Sbjct: 220 DMDLYLRIAPELYLKRLLVGGFEKVFEINRNFRNEG-LSTRHNPEFTMLEFYQAYATYHD 278

Query: 249 ILNTMENVLRGVFEEFSNGNTVS 271
           +++  E ++  +  E +    +S
Sbjct: 279 LMDLTEEMVSWLAHEVTGSMDIS 301



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMP   G   GIDR+VMLL  + ++R+V LFP
Sbjct: 451 RALEYGMPSAAGEGIGIDRLVMLLTDSPSIRDVILFP 487


>gi|237722500|ref|ZP_04552981.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229448310|gb|EEO54101.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 447

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 120/300 (40%), Gaps = 35/300 (11%)

Query: 11  DLGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IAKSVRS 67
           DL  SD+ G  V + GWV   R    I F+ + D   +  +    +   FE  + K++ +
Sbjct: 7   DLLKSDIYGIDVYVRGWVRTHRQSKNISFIALNDGSTVHNLQIVIEHVKFEKNMLKTITT 66

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
              + I G  + RSA          Q+E+ A  IE+  +A+    P+  +    E +R +
Sbjct: 67  GSSIGIKGKFI-RSAGG------KQQVEVIAGDIEVYGIADPQEYPLQKKEHSLEYLR-E 118

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
              L LR +        R  +  ++        F   +TPI+T S  EGA +        
Sbjct: 119 IAHLRLRTNIFGAIFRMRHNMAFAIHRYFNERGFFYFNTPIITTSDSEGAGELFEVKTEL 178

Query: 188 QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           +  F+  P       QL   L A      +  +P FR E+  + R   EF+ ++ E++F 
Sbjct: 179 KDDFFGSPANLTVSGQLEGELGALALGAIYTFSPTFRAENSNTFRHLSEFWMIEPEVAFN 238

Query: 245 EQDDILNTMENVLRGVFE----------EFSNGN-----------TVSNNFLRICYDDAI 283
           + +D ++  E+ L+ +             F N N             +N F+R+ Y  AI
Sbjct: 239 DINDNMDLAEDFLKYLIRYALENCESDLAFLNDNVDNGLMDKLHFVANNEFMRLPYSKAI 298


>gi|237738740|ref|ZP_04569221.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423843|gb|EEO38890.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 461

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/304 (21%), Positives = 119/304 (39%), Gaps = 51/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV ++R      F+++ D   +   Q+V       F+    +     + + G ++
Sbjct: 19  IELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSIASTIKVKGTLV 78

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                       +GQ +E+ A++IE+   A+ L  P+  +R   E +R K   L  R +T
Sbjct: 79  KSEG--------SGQDLEVKAKEIEVFQKAD-LEYPLQNKRHTFEYLRTKAH-LRPRTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVN- 187
                  R+ +  ++       NF+   TPI+T S  EGA +           VP + N 
Sbjct: 129 FSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEMFRITTFDLNKVPKKENG 188

Query: 188 ----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+          QL      + F   +   P FR E   + R   EF+ ++ E
Sbjct: 189 EIDFSKDFFGKSTNLTVSGQLNVETYCAAFRNVYTFGPTFRAEYSNTARHASEFWMIEPE 248

Query: 241 MSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLRICY 279
           ++F +    +   E +++ + +          EF N            N ++N+F R+ Y
Sbjct: 249 IAFGDLGANMELAEAMVKYIIKYVMDNCPEEMEFFNSFIEKGLFDKLNNVLNNDFARVTY 308

Query: 280 DDAI 283
            +AI
Sbjct: 309 TEAI 312



 Score = 43.9 bits (102), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 15/91 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  EI  G  R    +++++    +G++KE  E      RFG           PH
Sbjct: 376 DLLAPGIGEIIGGSQREDNYDLLVKRMDELGLNKEDYEFYLDLRRFGSF---------PH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R++M L G +N+R+V  FP + N
Sbjct: 427 SGYGLGFERMMMYLTGMQNIRDVIPFPRTPN 457


>gi|160882412|ref|ZP_02063415.1| hypothetical protein BACOVA_00363 [Bacteroides ovatus ATCC 8483]
 gi|237714338|ref|ZP_04544819.1| asparaginyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262408170|ref|ZP_06084717.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|293369517|ref|ZP_06616096.1| asparagine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|294645460|ref|ZP_06723161.1| asparagine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294806728|ref|ZP_06765555.1| asparagine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|299148165|ref|ZP_07041227.1| asparagine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|156112225|gb|EDO13970.1| hypothetical protein BACOVA_00363 [Bacteroides ovatus ATCC 8483]
 gi|229445502|gb|EEO51293.1| asparaginyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262353722|gb|EEZ02815.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292635402|gb|EFF53915.1| asparagine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292639161|gb|EFF57478.1| asparagine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294446010|gb|EFG14650.1| asparagine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|295088081|emb|CBK69604.1| asparaginyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
 gi|298512926|gb|EFI36813.1| asparagine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 467

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 108/274 (39%), Gaps = 30/274 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L  +D+G+ V + GWV   R    + F+ + D   I  +    D A F+    
Sbjct: 6   RTKIVDLLKRTDIGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNLQIVVDLANFD---- 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPES 123
                 L   G  +S + E + +     ++E+ A++IE+L   +   PL   G      S
Sbjct: 62  -EEMLKLITTGACISVNGEMVESVGSGQKVEVQAREIEVLGTCDNTYPLQKKGH-----S 115

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + F      LR  T     V R R  +  ++      + F    TPI+TAS  EGA    
Sbjct: 116 MEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQMF 175

Query: 182 VPSRVN--------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDED 224
             + +N              +  F+    +     QL   L A+     +   P FR E+
Sbjct: 176 QVTTMNLYDLKKDERGSISYEDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRAEN 235

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             + R   EF+ ++ E++F +  D ++  E  ++
Sbjct: 236 SNTPRHLAEFWMIEPEVAFNDITDNMDLAEEFIK 269


>gi|323331966|gb|EGA73378.1| Msk1p [Saccharomyces cerevisiae AWRI796]
          Length = 537

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
           + L   K+ I+    +LPLP    R   E+     R +D + +     +V R RII  +R
Sbjct: 144 LSLICNKLPIVLSVSQLPLP---SRLNDETKIKSNRVVDYQLNGTQTLLV-RARIIKLLR 199

Query: 154 CRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
             +   NF+E  TPIL++ S    A+ F+  S+        L  AP+ + + L+ SG  +
Sbjct: 200 KFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDHLELRIAPELWLKRLIISGLQK 257

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            ++I   FR+E   S     EF  L+   +++  DDI+   E++ +
Sbjct: 258 VYEIGKVFRNEGIDSTH-NAEFSTLEFYETYMSMDDIVTRTEDLFK 302


>gi|317153108|ref|YP_004121156.1| lysyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943359|gb|ADU62410.1| lysyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 502

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 112/255 (43%), Gaps = 21/255 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVMS 79
           L+G V   R  G + F  ++   G  QV A  D   S  +++ K      ++ I G +  
Sbjct: 67  LAGRVVSYRSFGKVTFFHLQGRGGRIQVYAARDDLGSEDYQLFKKTDIGDIVGIRGSLFR 126

Query: 80  RSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                      TG++ +  +  ++++ +   LP    G ++     R++ R++DL     
Sbjct: 127 TK---------TGELTVKTRGFKLITKSLRPLPEKYHGLKDV--ETRYRQRYVDLIVTPR 175

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALP 195
            + I   RT ++  +R  +  + F+E  TP++ A  P GA  + F           Y + 
Sbjct: 176 TREIFTIRTAVVRELRNFLDEKGFMEVETPMMQAI-PGGATAKPFETHHNALDMKLY-MR 233

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GFDR ++I   FR+E   +   P EF  L+   ++    D+++  E 
Sbjct: 234 IAPELYLKRLLVGGFDRVYEINRNFRNEGISTQHNP-EFTMLEFYWAYANFTDLMDLTEE 292

Query: 256 VLRGVFEEFSNGNTV 270
           +   V E+ +  + V
Sbjct: 293 MFSRVAEKVTGSSVV 307



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL  + ++REV LFP+
Sbjct: 459 RALEYGMPPAAGQGVGIDRLVMLLTDSASIREVILFPL 496


>gi|241957635|ref|XP_002421537.1| asparagine--tRNA ligase, putative; asparaginyl-tRNA synthetase,
           mitochondrial precursor, putative [Candida dubliniensis
           CD36]
 gi|223644881|emb|CAX40879.1| asparagine--tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 489

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 41/280 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD---HYGITQVVANPDSACFEIAKS--VRSEWVL 71
           +GS +   G+V  +R    + F+DI D      +  V+   D   F++ +S  V+ +W  
Sbjct: 39  IGSIIEARGFVKSIRSSKKVGFVDITDGSISNNLNIVLQGSDQPKFKVGQSIVVKGDWC- 97

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRF 130
                    + +      +    E       IL  V ++ PL     ++   S+ F   F
Sbjct: 98  ---------AGKGKQPFELKYNPENPQHTFTILGDVTDDYPL-----QKKATSMSFLRNF 143

Query: 131 LDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
            ++  R  TL   +  R+ +   +     +++FI+ + P++T+S  EGA +      +N 
Sbjct: 144 PEIKHRTSTLGSFLRLRSHLEFKLMEFFQSQDFIKVTPPLITSSDCEGAGEVFKIEPLND 203

Query: 189 GSFYALPQAP-----------QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                 P+ P            Q     +A   +R + + PCFR E+ ++ R   EF+ L
Sbjct: 204 ND----PKEPFFGKNAYLTVSTQLHLECLALALNRAWTLTPCFRAENSKTTRHLSEFWML 259

Query: 238 DMEMS-FVEQDDILNTMENVLRGVFEEF--SNGNTVSNNF 274
           + E+S  V+ D +    EN++R V +    S+ +T  NN 
Sbjct: 260 EAEISHVVDVDQVTTFTENMIRFVTKSLVESSNDTDLNNL 299



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 5/90 (5%)

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           +DL+   F E+A G +R H  EV+L       ++ E +E          + G  PHGG  
Sbjct: 403 FDLLVPEFGELAGGSMREHDYEVLLANMKQDNMNIEDIE----WYLNLRKQGTIPHGGFG 458

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R++  L G  NVR++S FP +   C+
Sbjct: 459 LGFERLITYLAGYDNVRDISAFPRAPELCN 488


>gi|312084588|ref|XP_003144336.1| hypothetical protein LOAG_08758 [Loa loa]
 gi|307760499|gb|EFO19733.1| hypothetical protein LOAG_08758 [Loa loa]
          Length = 444

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 20/245 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +R+ GW  RV   G  +FL I D   +  + A       +I   V     + I G  +  
Sbjct: 28  IRIQGWARRVETRGKFLFLHISDGCSLKTIQAVVQR---DICPKVPVGSAVDIVGDWVKS 84

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +  N  +     E++  + +  S   ELP     E    +  R KY  L ++      
Sbjct: 85  DGKQQNMELFATNCEVAGLQQKTFS---ELPT----EECCADVTRKKYH-LRMKSIPFMC 136

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA-----LP 195
            +  R+R+    R     E+FI   TP+LT +  EGA D     + N+G+++      LP
Sbjct: 137 LLRLRSRLDQLSRSFFQEESFIHVDTPLLTHNDCEGAGDVFT-VQTNRGNYFGDQAVYLP 195

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            + Q + +  + S   + + IAP  R ++ ++ +   EF  L+ E +F   DD+    + 
Sbjct: 196 VSSQLHLESFVGS-LPKVYTIAPALRADNSQTRQHLAEFRMLEAEYAFA--DDLEQLCDL 252

Query: 256 VLRGV 260
           V R V
Sbjct: 253 VERYV 257


>gi|89097184|ref|ZP_01170074.1| asparaginyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89088007|gb|EAR67118.1| asparaginyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 463

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 117/312 (37%), Gaps = 63/312 (20%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           VR++GWV   R      FL++ D   +   QVV   +   F +I K+  S  V     +V
Sbjct: 21  VRITGWVRTSRDSKTFGFLEVNDGTFLKNVQVVYGDELPNFKDITKAAISSTVSIEGSIV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++          +    E+ A++I I   +  + PL     ++   S  +      LR  
Sbjct: 81  LTPD--------MKQPFEMKAEQITIEGKSNSDYPL-----QKKKHSFEYLRTIAHLRPR 127

Query: 137 TLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           T   + V R R + S         + FI   TP++T S  EGA +     RV       +
Sbjct: 128 TNTYSAVFRIRSLASYAIHNFFQEKGFIYAQTPVITGSDTEGAGEMF---RVTTMDMNNV 184

Query: 195 PQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           P+  +                    Q      A  F + +   P FR E+  + R   EF
Sbjct: 185 PKTDEGDVDFSKDFFNGEANLTVSGQLSAEAFALAFQKVYTFGPTFRAENSNTTRHAAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNN 273
           + ++ E++F E  DIL+  E +++ V +   N                        ++ +
Sbjct: 245 WMVEPEVAFAELPDILDLAEAMIKHVIQYVLNEAPEEITFFNSFIDKTLIERLNTALNTD 304

Query: 274 FLRICYDDAIRR 285
           + R+ Y DAI +
Sbjct: 305 YARVTYTDAIEQ 316


>gi|294936249|ref|XP_002781678.1| asparaginyl-tRNA synthetase, putative [Perkinsus marinus ATCC
           50983]
 gi|239892600|gb|EER13473.1| asparaginyl-tRNA synthetase, putative [Perkinsus marinus ATCC
           50983]
          Length = 747

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 91/446 (20%), Positives = 174/446 (39%), Gaps = 81/446 (18%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC--FE--IAKSV 65
           D G   +G  V + GWV   R  G G  F++I D   +  +    DS+C  FE  IA+  
Sbjct: 272 DGGAGLIGKTVSVCGWVRTKRSQGSGFAFVEISDGSCLQGLQLVLDSSCPDFEGTIAQIA 331

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQ---KIEILSVAEELPLPVFGEREYP 121
               +  I  LV S +          GQ +E+S +   KI+++   E    P+  ++   
Sbjct: 332 TGASIQAIGALVASPA---------KGQAVEVSVREKGKIKVIGGVESAAYPLAKKQHSR 382

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-F 180
           E +R +   L  R + +      R+ +  ++    ++ +F    TP++T++  EGA + F
Sbjct: 383 EFLR-EIAHLRPRTNLIGAVARVRSSLSGAVHAFFMSRDFKYVHTPLITSADCEGAGEMF 441

Query: 181 LVPSRVNQGS--------------------FYALPQAPQQYKQLLM---ASGFDRYFQIA 217
            V S + +                      F+  P       QL +   A      +   
Sbjct: 442 QVTSLLQKAEGAHQDVKIDSNTGRFDYKQDFFGRPTYLTVSGQLNVENYACALSDVYTFG 501

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR--------------GVFEE 263
           PCFR E+  + R   EF+ ++ E+ F +  D +   E  ++                F++
Sbjct: 502 PCFRAENSHTSRHLAEFWMIEPELCFADIHDNMKCAEEFIQHCARHVLAHCREDIAFFDK 561

Query: 264 FSNG-------NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV-------TEHFVHS 309
           F          N ++  F R+ Y +AI +    + + +      N+       +EH  + 
Sbjct: 562 FIEKGLIKRLENLIAEPFARVSYTEAIDKLLKAQKNGKAKFENTNIYWGFDLDSEHERYL 621

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
             +++ K +       V+  PA      +AF  R NE    + +  +A +       G V
Sbjct: 622 TEKIYKKPVI------VYNYPA----AIKAFYMRANEADEDESKQTVAAMDILAPLVGEV 671

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQD 395
            G     + L++++ +   + +D++D
Sbjct: 672 CGGSVREERLDVLDKKLSDLNMDVED 697



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIAAGIDRIVM 548
           E+  G +R    +V+ +  S++ +    VE+ +   YR  +  G  PH G   G +R++M
Sbjct: 670 EVCGGSVREERLDVLDKKLSDLNMD---VEDYW--WYRDLRRFGSVPHAGFGIGFERLIM 724

Query: 549 LLLGAKNVREVSLFPMSQNFCDL 571
           ++ G +N+R+V  +P     C+ 
Sbjct: 725 MMTGVENIRDVIPYPRYPGRCEF 747


>gi|159114319|ref|XP_001707384.1| Lysyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157435489|gb|EDO79710.1| Lysyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 576

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 4/135 (2%)

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPIL-TASSPEGARDFLV 182
           RF+ R+LD   +   + IV+R+ IIN +R  MI + N++E  TP+L T      A+ F+ 
Sbjct: 216 RFRQRYLDFIINNTGQKIVQRSGIINFIRRFMIDQRNYLEVETPMLQTVHGGAAAQPFVC 275

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            S  + G    L  AP+ + + L+  G +R F+I   FR+E       P EF  ++   +
Sbjct: 276 KSN-DLGHDVYLRIAPELFLKRLVVGGLNRVFEINKNFRNESSDQTHSP-EFTMMEAYSA 333

Query: 243 FVEQDDILNTMENVL 257
           + + +D+ + +E ++
Sbjct: 334 YDDLEDMCDLIEGLV 348



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +    G+PP GGI  GIDR+VMLL  +  +REV  FP+
Sbjct: 533 KCLDYGLPPTGGIGIGIDRLVMLLTNSSTIREVIAFPL 570


>gi|15610734|ref|NP_218115.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15843211|ref|NP_338248.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31794775|ref|NP_857268.1| lysyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121639518|ref|YP_979742.1| lysyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148663463|ref|YP_001284986.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148824804|ref|YP_001289558.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167968199|ref|ZP_02550476.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215432573|ref|ZP_03430492.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|219559674|ref|ZP_03538750.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224992015|ref|YP_002646704.1| lysyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800639|ref|YP_003033640.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis KZN 1435]
 gi|254366156|ref|ZP_04982200.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|260202790|ref|ZP_05770281.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289555861|ref|ZP_06445071.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis KZN 605]
 gi|289571838|ref|ZP_06452065.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis T17]
 gi|289572253|ref|ZP_06452480.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis K85]
 gi|289755726|ref|ZP_06515104.1| lysyl-tRNA synthetase 1 [Mycobacterium tuberculosis EAS054]
 gi|297636274|ref|ZP_06954054.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297733268|ref|ZP_06962386.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|306777954|ref|ZP_07416291.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu001]
 gi|306778485|ref|ZP_07416822.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu002]
 gi|306786506|ref|ZP_07424828.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu003]
 gi|306790872|ref|ZP_07429194.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu004]
 gi|306791195|ref|ZP_07429497.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu005]
 gi|306795980|ref|ZP_07434282.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu006]
 gi|306801226|ref|ZP_07437894.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu008]
 gi|306805440|ref|ZP_07442108.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu007]
 gi|306969731|ref|ZP_07482392.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu009]
 gi|306974072|ref|ZP_07486733.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu010]
 gi|307081780|ref|ZP_07490950.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu011]
 gi|307086396|ref|ZP_07495509.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu012]
 gi|313660598|ref|ZP_07817478.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|54039679|sp|P67608|SYK1_MYCBO RecName: Full=Lysyl-tRNA synthetase 1; AltName: Full=Lysine--tRNA
           ligase 1; Short=LysRS 1
 gi|54042300|sp|P67607|SYK1_MYCTU RecName: Full=Lysyl-tRNA synthetase 1; AltName: Full=Lysine--tRNA
           ligase 1; Short=LysRS 1
 gi|254782475|sp|A1KPT4|SYK_MYCBP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|254782476|sp|C1AI57|SYK_MYCBT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|254782478|sp|A5U8S4|SYK_MYCTA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|2113978|emb|CAB08946.1| LYSYL-TRNA SYNTHETASE 1 LYSS (LYSINE--TRNA LIGASE 1) (LYSRS 1)
           (LYSINE TRANSLASE) [Mycobacterium tuberculosis H37Rv]
 gi|13883565|gb|AAK48062.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31620372|emb|CAD95815.1| LYSYL-TRNA SYNTHETASE 1 LYSS (LYSINE--TRNA LIGASE 1) (LYSRS 1)
           (LYSINE TRANSLASE) [Mycobacterium bovis AF2122/97]
 gi|121495166|emb|CAL73652.1| Lysyl-tRNA synthetase 1 lysS [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|134151668|gb|EBA43713.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148507615|gb|ABQ75424.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148723331|gb|ABR07956.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis F11]
 gi|224775130|dbj|BAH27936.1| lysyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253322142|gb|ACT26745.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis KZN 1435]
 gi|289440493|gb|EFD22986.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis KZN 605]
 gi|289536684|gb|EFD41262.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis K85]
 gi|289545592|gb|EFD49240.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis T17]
 gi|289696313|gb|EFD63742.1| lysyl-tRNA synthetase 1 [Mycobacterium tuberculosis EAS054]
 gi|308213726|gb|EFO73125.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu001]
 gi|308328479|gb|EFP17330.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu002]
 gi|308328893|gb|EFP17744.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu003]
 gi|308332731|gb|EFP21582.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu004]
 gi|308340224|gb|EFP29075.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu005]
 gi|308343546|gb|EFP32397.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu006]
 gi|308348013|gb|EFP36864.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu007]
 gi|308351954|gb|EFP40805.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu008]
 gi|308352740|gb|EFP41591.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu009]
 gi|308356589|gb|EFP45440.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu010]
 gi|308360546|gb|EFP49397.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu011]
 gi|308364162|gb|EFP53013.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu012]
 gi|323717707|gb|EGB26907.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis CDC1551A]
 gi|328460370|gb|AEB05793.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis KZN 4207]
          Length = 505

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 5/155 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           PLPV   +E  E  R + R++DL      + + + R  ++ ++R  +    F+E  TP+L
Sbjct: 147 PLPV-AHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVL 205

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T +    AR F   S       Y L  AP+ + +  +  GFD+ F++   FR+E   S 
Sbjct: 206 QTLAGGAAARPFATHSNALDIDLY-LRIAPELFLKRCIVGGFDKVFELNRVFRNEGADST 264

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
             P EF  L+   ++   DD       +++ V +E
Sbjct: 265 HSP-EFSMLETYQTYGTYDDSAVVTRELIQEVADE 298



 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 15/93 (16%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQ---------AFSNVGISKEVVENRFGGLYRAFQC 531
           ++DL   G E+A+G   + +S+ ++Q         A +       V++  F     A + 
Sbjct: 413 KWDLYLRGIELATG--YSELSDPVVQRERFADQARAAAAGDDEAMVLDEDF---LAALEY 467

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP  G   GIDR++M L G  ++RE  LFP+
Sbjct: 468 GMPPCTGTGMGIDRLLMSLTGL-SIRETVLFPI 499


>gi|304373066|ref|YP_003856275.1| Putative asparaginyl-trna synthetase protein [Mycoplasma hyorhinis
           HUB-1]
 gi|304309257|gb|ADM21737.1| Putative asparaginyl-trna synthetase protein [Mycoplasma hyorhinis
           HUB-1]
          Length = 446

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 107/256 (41%), Gaps = 37/256 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + + GW+   R +  I FL+I D   +   Q+V   D A  E            I+ L +
Sbjct: 18  ISIKGWLTNSRGNAKIKFLEINDGSTFENLQLVFKNDKATIE-----------QIETLNL 66

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-ESIRFKYRFLDLRRDT 137
             + E       T Q   + QK E+L    +L +      E+P ++      FL   R  
Sbjct: 67  GAAIEVKGVFAYTPQ---AQQKGELL--CSQLTILAHSNAEFPIQNQEMSSEFL---RSI 118

Query: 138 LHKNIVKRTRIINS-MRCRMI----------AENFIECSTPILTASSPEGARDFLVPSRV 186
            H  I  RT++  + MR R              +F+  S+PI+T++  EGA +  V    
Sbjct: 119 PH--IRHRTKLFRAVMRIRSTLAFEIHEYFRKHDFLYLSSPIITSNDGEGAGEAFVVDNE 176

Query: 187 NQGSF--YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
            +  F   A      Q      A GF + +  AP FR E   + +   EF+ ++ E+SF 
Sbjct: 177 EKDFFNKKATLGVTGQLHAEAYALGFQKVYTFAPTFRAERSNTKKHAAEFWMIEPEVSFY 236

Query: 245 EQDDILNTMENVLRGV 260
           +  DI++  +++L+ V
Sbjct: 237 KLKDIIHLGDSLLKTV 252


>gi|284043143|ref|YP_003393483.1| lysyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283947364|gb|ADB50108.1| lysyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 491

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 31/41 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +A + GMPP GG+  GIDR+VMLL G +++REV LFP  ++
Sbjct: 451 QALEQGMPPTGGVGLGIDRLVMLLTGRRSIREVVLFPAMRD 491


>gi|215405648|ref|ZP_03417829.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215413522|ref|ZP_03422194.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|289747435|ref|ZP_06506813.1| lysyl-tRNA synthetase 1 lyss [Mycobacterium tuberculosis 02_1987]
 gi|294993718|ref|ZP_06799409.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|298527077|ref|ZP_07014486.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis 94_M4241A]
 gi|289687963|gb|EFD55451.1| lysyl-tRNA synthetase 1 lyss [Mycobacterium tuberculosis 02_1987]
 gi|298496871|gb|EFI32165.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis 94_M4241A]
 gi|326905437|gb|EGE52370.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis W-148]
          Length = 505

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 5/155 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           PLPV   +E  E  R + R++DL      + + + R  ++ ++R  +    F+E  TP+L
Sbjct: 147 PLPV-AHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVL 205

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T +    AR F   S       Y L  AP+ + +  +  GFD+ F++   FR+E   S 
Sbjct: 206 QTLAGGAAARPFATHSNALDIDLY-LRIAPELFLKRCIVGGFDKVFELNRVFRNEGADST 264

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
             P EF  L+   ++   DD       +++ V +E
Sbjct: 265 HSP-EFSMLETYQTYGTYDDSAVVTRELIQEVADE 298



 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 15/93 (16%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQ---------AFSNVGISKEVVENRFGGLYRAFQC 531
           ++DL   G E+A+G   + +S+ ++Q         A +       V++  F     A + 
Sbjct: 413 KWDLYLRGIELATG--YSELSDPVVQRERFADQARAAAAGDDETMVLDEDF---LAALEY 467

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP  G   GIDR++M L G  ++RE  LFP+
Sbjct: 468 GMPPCTGTGMGIDRLLMSLTGL-SIRETVLFPI 499


>gi|119945617|ref|YP_943297.1| asparaginyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166231671|sp|A1SW33|SYN_PSYIN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|119864221|gb|ABM03698.1| asparaginyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 466

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 121/313 (38%), Gaps = 57/313 (18%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID- 74
           +G+ V + GW+   R    GI FL I D         +P  A    A    S+ VL +  
Sbjct: 16  IGTEVTVQGWIRTRRDSKAGISFLAIYDGSCF-----DPIQAVVPAALENYSDEVLNLTA 70

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G  +  + E + +     Q E+ A ++E+L  V +    P+  +R    SI +      L
Sbjct: 71  GCSVQVTGELVESPGKGQQFEIQATQVEVLGFVQDPDTYPMSAKRH---SIEYMREHAHL 127

Query: 134 RRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T     V R R  + ++M      + F   STPI+T S  EGA +     RV+    
Sbjct: 128 RARTNMFGAVTRVRNCLSHAMHNFFYEKGFNWISTPIITGSDAEGAGEMF---RVSTLDL 184

Query: 192 YALPQ---APQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
             LP+       YK+        L  SG            + +   P FR E+  + R  
Sbjct: 185 ENLPRNDTGAIDYKKDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSHTTRHL 244

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT---------------------V 270
            EF+ ++ E++F +  D     E++L+ VF                             V
Sbjct: 245 AEFWMVEPEIAFADLADAAQLAEDMLKYVFNAVLTERADDMAFFAQRVDKEAITRLEKIV 304

Query: 271 SNNFLRICYDDAI 283
           S+ F+R+ Y DAI
Sbjct: 305 SSEFVRMDYTDAI 317



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 19/109 (17%)

Query: 477 IKAFQYDLVCNGFEIAS------------GGIRNHMSEVML-QAFSNVGISKEVVENRFG 523
           IKAF   L  +G  +A+            GG +     V L + F  +GI+KE       
Sbjct: 363 IKAFYMKLNADGKTVAAMDVLAPGIGEIIGGSQREEDLVALDKRFDEMGINKEDY----- 417

Query: 524 GLYRAF-QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             YR   + G  PH G   G +R+V  + G +N+R+V  FP +    D 
Sbjct: 418 SWYRDLRKYGTVPHAGFGLGFERLVSYVTGVQNIRDVIAFPRAPGSADF 466


>gi|323342177|ref|ZP_08082410.1| asparagine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464602|gb|EFY09795.1| asparagine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 460

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 30/262 (11%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D   FV+L GWV   R    + F+++ D               F  A+ V   +   +D 
Sbjct: 23  DAIEFVQLQGWVRTNRKGKNVGFIELND------------GTYFRSAQCV---YAADLDN 67

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYP-ESIRFKYRFL-- 131
                   T  A  +TG  +++    +   +  +E+ L      +YP +  R  Y +L  
Sbjct: 68  YDEIGKYNTGTAITVTGLFKVTPDGKQPFEIEVKEVKLEGECSSDYPLQKKRHSYEYLRE 127

Query: 132 --DLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARD-FLVPSRV 186
              LR  T     V R R + SM      +N  F+   TP++T +  EGA + F+V +R 
Sbjct: 128 IAHLRVRTNSFMAVFRVRSVLSMAIHEFFQNQGFVYVHTPVITGNDAEGAGEAFVVTTRD 187

Query: 187 N---QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +   +  F+    +     QL     A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 188 DAKYEKDFFGKKASLTVSGQLHAEAFALAFRDVYTFGPTFRAENSNTARHASEFWMVEPE 247

Query: 241 MSFVEQDDILNTMENVLRGVFE 262
           ++F + +D +N +E++++   E
Sbjct: 248 IAFADLEDNMNLIEDLVKYCIE 269


>gi|215424843|ref|ZP_03422762.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|289748113|ref|ZP_06507491.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis T92]
 gi|289688700|gb|EFD56129.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis T92]
          Length = 439

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 5/155 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           PLPV   +E  E  R + R++DL      + + + R  ++ ++R  +    F+E  TP+L
Sbjct: 147 PLPV-AHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVL 205

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T +    AR F   S       Y L  AP+ + +  +  GFD+ F++   FR+E   S 
Sbjct: 206 QTLAGGAAARPFATHSNALDIDLY-LRIAPELFLKRCIVGGFDKVFELNRVFRNEGADST 264

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
             P EF  L+   ++   DD       +++ V +E
Sbjct: 265 HSP-EFSMLETYQTYGTYDDSAVVTRELIQEVADE 298


>gi|24373772|ref|NP_717815.1| asparaginyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|38258372|sp|Q8EEZ1|SYN_SHEON RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|24348158|gb|AAN55259.1|AE015664_2 asparaginyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 466

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 107/280 (38%), Gaps = 48/280 (17%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    GI FL + D             +CF   + V    + 
Sbjct: 12  GEHAVGSTVTVRGWVRTRRDSKAGISFLAVYD------------GSCFNPIQGVVPNSLE 59

Query: 72  CIDGLVMSRSAETINANIITGQI----------ELSAQKIEILSVAEEL-PLPVFGEREY 120
             D  V+  +A    + I+TG I          EL    +E+    E+    P+  +R  
Sbjct: 60  NYDNEVLKLTAGC--SVIVTGDIVESPGAGQAYELQVTAVEVTGWVEDPDTYPMAAKRHS 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGAR 178
            E +R       LR  T     V R R  ++    R   EN F+  STP++TAS  EGA 
Sbjct: 118 IEHLR---ELAHLRPRTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAG 174

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFR 221
           +    S ++  +          Y +        L  SG            + +   P FR
Sbjct: 175 EMFRVSTLDMENLPRTSDGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFR 234

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            E+  + R   EF+ ++ E++F   +DI    E +L+  F
Sbjct: 235 AENSNTSRHLAEFWMVEPEVAFATLNDIAGLAEGMLKYAF 274


>gi|149910091|ref|ZP_01898738.1| asparaginyl-tRNA synthetase [Moritella sp. PE36]
 gi|149806816|gb|EDM66778.1| asparaginyl-tRNA synthetase [Moritella sp. PE36]
          Length = 466

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 113/275 (41%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VGS V   GW+   R    GI FL + D             +CF+  ++V S+ +     
Sbjct: 16  VGSTVTTKGWIRTRRDSKAGISFLAVYD------------GSCFDPIQAVVSKDLPNYSD 63

Query: 76  LVMSRSAE---TINANII----TGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
            V+S +A     I   ++     GQ  E+ A ++ +L + E+    P+  +R    SI +
Sbjct: 64  DVLSLTAGCSVEITGTVVESPGKGQAFEIQATEVIVLGLVEDPDTYPMSAKRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  ++    R   EN +   STPI+TAS  EGA +    S
Sbjct: 121 LREHAHLRGRTNVMGAVMRVRNCLSQAIHRFYHENGYNWLSTPIITASDCEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     +    Y Q        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMNNLPLTDKGEVDYNQDFFGKEAFLTVSGQLNAETYACAIGKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + DD     E++L+  F+
Sbjct: 241 TRHLAEFWMVEPEIAFADLDDAAKLAEDMLKYCFK 275


>gi|149174859|ref|ZP_01853483.1| asparaginyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148846196|gb|EDL60535.1| asparaginyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 463

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/320 (21%), Positives = 122/320 (38%), Gaps = 49/320 (15%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGIT--QVVANPDSACFE- 60
           RT     L  S  G  +++ GWV   R    G  F+++ D   +   Q+V + +   +E 
Sbjct: 3   RTKIKSALHTSQPGETIKVCGWVRTRRDSKSGFSFVELNDGSCMANLQIVLDQNVPNYEK 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + K + +   L + G V+    +         +IE+ A+  ++   A+    P+  +R  
Sbjct: 63  LIKDLTTGSSLSVTGKVIESPGKN-------QRIEIHAEAFDLYGSADAETYPLQKKRHS 115

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +   L  R +T       R     ++     +  FI   TPI+T S  EGA + 
Sbjct: 116 FEFLR-EIAHLRPRTNTFGAITRVRNEAATAIHRFFQSRGFIYIQTPIITTSDCEGAGEM 174

Query: 181 LVPSRVN-------------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
              + +N                F+   A      Q +  + A+     +   P FR E+
Sbjct: 175 FQVTTLNLDRLAQVQTEIDFSQDFFGKRASLTVSGQLEAEIFATSIGDCYTFGPTFRAEN 234

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE----------FSNG------- 267
             + R   EF+ ++ EM F +  D +   E+ +R V  +          F N        
Sbjct: 235 SNTTRHLAEFWMIEPEMPFYDLQDNMALAESFVRDVISDVLENCAEDMVFFNQRIDKTTL 294

Query: 268 ----NTVSNNFLRICYDDAI 283
               N   N F+RI Y +AI
Sbjct: 295 ETLRNITENEFIRISYTEAI 314


>gi|332882681|ref|ZP_08450293.1| lysine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332679481|gb|EGJ52466.1| lysine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 562

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 24/289 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +  +R  G   F  ++D  G  Q+  N D  C +  K++ +E    +  L 
Sbjct: 45  GKEVIVAGRLMSLRVQGKASFATLQDSEGSVQLYFNRDEMCPDEDKTLYNEVFKKLLDLG 104

Query: 78  MSRSAETINANIITGQIELSAQKIEILS-VAEELPLP-------VFGEREYPESIRFKYR 129
                E        G+  +  +   +LS V   LP+P       V      PE  R++ R
Sbjct: 105 DFIGVEGYLFITKMGEKTVMVKNFTLLSKVLRPLPMPKVDADGKVHDAFTDPEQ-RYRMR 163

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRV 186
           ++DL  +   K + +KRT++ N+MR       ++E  TP+L A  P G  AR F+     
Sbjct: 164 YVDLVVNPQVKEVFIKRTKLFNAMRQFFNEAGYLEVETPVLQA-IPGGASARPFITHHNA 222

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ + 
Sbjct: 223 LDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKDY 280

Query: 247 DDILNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIRRY 286
           + +++  E +L        G  +     +TV     + R+   DAI+++
Sbjct: 281 NWMMDFTERLLEHCAIAVNGTTKATFGAHTVDFKAPYPRVTMTDAIKQF 329



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 454 RALEYGMPPTSGLGIGMDRLIMFLTNNESIQEVLFFP 490


>gi|18311482|ref|NP_563416.1| asparaginyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|110798948|ref|YP_697187.1| asparaginyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168205760|ref|ZP_02631765.1| asparaginyl-tRNA synthetase [Clostridium perfringens E str.
           JGS1987]
 gi|168209738|ref|ZP_02635363.1| asparaginyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|168213424|ref|ZP_02639049.1| asparaginyl-tRNA synthetase [Clostridium perfringens CPE str.
           F4969]
 gi|168217617|ref|ZP_02643242.1| asparaginyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|169343330|ref|ZP_02864340.1| asparaginyl-tRNA synthetase [Clostridium perfringens C str.
           JGS1495]
 gi|182624293|ref|ZP_02952078.1| asparaginyl-tRNA synthetase [Clostridium perfringens D str.
           JGS1721]
 gi|20139876|sp|P58693|SYN_CLOPE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|122958654|sp|Q0TMF3|SYN_CLOP1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|18146166|dbj|BAB82206.1| asparagine-tRNA ligase [Clostridium perfringens str. 13]
 gi|110673595|gb|ABG82582.1| asparaginyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|169298628|gb|EDS80709.1| asparaginyl-tRNA synthetase [Clostridium perfringens C str.
           JGS1495]
 gi|170662749|gb|EDT15432.1| asparaginyl-tRNA synthetase [Clostridium perfringens E str.
           JGS1987]
 gi|170712107|gb|EDT24289.1| asparaginyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|170715076|gb|EDT27258.1| asparaginyl-tRNA synthetase [Clostridium perfringens CPE str.
           F4969]
 gi|177910511|gb|EDT72884.1| asparaginyl-tRNA synthetase [Clostridium perfringens D str.
           JGS1721]
 gi|182380304|gb|EDT77783.1| asparaginyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 465

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 121/325 (37%), Gaps = 64/325 (19%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V++SGW+  +R      F+++ D      V    DSA     K         I  L +S 
Sbjct: 22  VKISGWIRTLRASNAFGFIEVNDGSFFKNVQVVFDSAKISNYKE--------ISKLPISS 73

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-ESIRFKYRFLDLRRDTLH 139
           S   I   + T     S Q  EI   AEE+ +    + +YP +  R  + +L   R   H
Sbjct: 74  SISVIGTLVETPD---SKQPFEIQ--AEEIIVEGMSDSDYPLQKKRHTFEYL---RTIAH 125

Query: 140 ----KNIVKRTRIINSMRCRMIA-----ENFIECSTPILTASSPEGA--------RDFLV 182
                N    T  + S+    I      + F+   TPILT S  EGA         D + 
Sbjct: 126 LRPRSNAFSATFRVRSVAAYAIHKFFQDQGFVYTHTPILTGSDCEGAGEMFRVTTLDMMA 185

Query: 183 PSRVNQG------SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           P    +G       F+          QL     A  F   +   P FR E+  + +   E
Sbjct: 186 PPIAEEGGIDFSQDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSNTVKHAAE 245

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSN 272
           F+ ++ EM+F +  D +   EN+L+ V              F +F +        + V++
Sbjct: 246 FWMIEPEMAFADLIDDMEVAENMLKYVIKYVMDECPEEIAFFNQFVDKGLLERLNHVVNS 305

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPI 297
            F ++ Y +A++       +   P+
Sbjct: 306 EFGKVTYTEAVKLLQESGKEFEYPV 330


>gi|87120695|ref|ZP_01076588.1| lysyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86163923|gb|EAQ65195.1| lysyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 499

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 24/260 (9%)

Query: 23  LSGWVHRVRPHGGII-----FLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCI 73
           L    H+V   G I+     F+ ++D  G  Q   N  +   E+    ++ W    ++ I
Sbjct: 60  LEALDHKVSIAGRIVRNRGAFMLLQDMSGQIQAYVNRKALSPELLADQKT-WDLGDIIGI 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V              G + +  Q+  +L+ A   PLP   +       R++ R++DL
Sbjct: 119 KGPVHKSG---------KGDLYVDMQEAVLLTKALR-PLPDKHKGLADMETRYRQRYVDL 168

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
              +   K    R++I++++R  +    F E  TP++ T      AR F+          
Sbjct: 169 IVNEESRKTFQMRSQIVSTIRRFLEDRRFTEVETPMMQTIPGGASARPFVTHHNAMDMQM 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   ++ +  D+++
Sbjct: 229 F-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEFYQAYADYKDLMD 286

Query: 252 TMENVLRGVFEEFSNGNTVS 271
             E++LR V E+      V+
Sbjct: 287 LTEDMLRDVAEKVLGTTKVT 306



 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EIA+G    +  E     F+     K+  ++    F   Y  A + G+PP 
Sbjct: 407 RFEFFVGGREIANGFSELNDPEDQADRFNKQVAEKDAGDDEAMHFDADYINALEHGLPPT 466

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML   A ++R+V LFP
Sbjct: 467 AGEGIGIDRLVMLFTDAPSIRDVILFP 493


>gi|325578443|ref|ZP_08148578.1| asparagine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160179|gb|EGC72308.1| asparagine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 467

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 109/271 (40%), Gaps = 38/271 (14%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +G  V + GWV   R    G+ FL + D   +   QV+ N D   +E      SE +   
Sbjct: 17  IGEKVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQVIVNNDIENYE------SEVLRLT 70

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLD 132
            G  +  +   + +      +EL A+K+E+    E+    P+  +R    SI +      
Sbjct: 71  TGCSVIVTGTIVESPAEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLREVAH 127

Query: 133 LRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV+   
Sbjct: 128 LRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RVSTLD 184

Query: 191 FYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPRSDRL 230
              LP+         Q +   +  L  SG            + +   P FR E+  + R 
Sbjct: 185 LENLPRGEDGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRH 244

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
             EF+ ++ E++F    D     E++L+ VF
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVF 275


>gi|288549447|ref|ZP_05967122.2| hypothetical protein ENTCAN_05502 [Enterobacter cancerogenus ATCC
           35316]
 gi|288319123|gb|EFC58061.1| asparagine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 492

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 109/270 (40%), Gaps = 42/270 (15%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V + GWV   R    GI FL + D             +CF+  ++V +  +   +  V+ 
Sbjct: 46  VTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNDDVLH 93

Query: 80  RSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFKYRFL 131
            +  T  + I+TG +  S    Q  EI + A E+   V     YP      SI +     
Sbjct: 94  LT--TGCSVIVTGVVVASPGQGQSFEIQASAIEVTGWVEDPDTYPMAAKRHSIEYLREVA 151

Query: 132 DLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            LR  T     V R R  +  ++      + +   STP++TAS  EGA +    S ++  
Sbjct: 152 HLRPRTNLIGAVARVRHTLAQALHRFFDEQGYFWVSTPLITASDTEGAGEMFRVSTLDME 211

Query: 190 SFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPG 232
           +    P+    Y +        L  SG            + +   P FR E+  + R   
Sbjct: 212 NLPRTPEGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLA 271

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           EF+ L+ E++F + +D+    E +L+ VF+
Sbjct: 272 EFWMLEPEVAFADLNDVAGLAEAMLKYVFK 301


>gi|189463705|ref|ZP_03012490.1| hypothetical protein BACINT_00038 [Bacteroides intestinalis DSM
           17393]
 gi|189438655|gb|EDV07640.1| hypothetical protein BACINT_00038 [Bacteroides intestinalis DSM
           17393]
          Length = 467

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 113/277 (40%), Gaps = 36/277 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F  E+ 
Sbjct: 6   RTKIVDVLKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQVVVDLANFDEEML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREY 120
           K + +   L ++G         +  ++ +GQ  E+ A++IE+L   +   PL   G    
Sbjct: 66  KDITTGACLSVNG--------ELTESVGSGQKAEIQAREIEVLGTCDNTYPLQKKGH--- 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGA- 177
             ++ F      LR  T     V R R  +  ++      + F+   TPI+TAS  EGA 
Sbjct: 115 --TLEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHTFFHQKGFVYFHTPIITASDCEGAG 172

Query: 178 RDFLVPSR-------------VNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221
           + F V ++             +    F+    +     QL   L A+     +   P FR
Sbjct: 173 QMFQVTTKNLYDLKKDEAGSIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            E+  + R   EF+ ++ E++F +  D ++  E  ++
Sbjct: 233 AENSNTPRHLAEFWMVEPEVAFNDITDNMDLAEEFIK 269


>gi|157165521|ref|YP_001467461.1| lysyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|112800973|gb|EAT98317.1| lysyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 503

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 113/283 (39%), Gaps = 23/283 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74
           G  V L+G +  +R  G  +F +I D  G  Q+       D   F+I K       + I 
Sbjct: 56  GQLVGLAGRIKLIRDAGKAVFANIEDENGNLQIYFSNKTLDPEWFKIVKKY-----VEIG 110

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            +V  R    I     TG+  +   ++  L+     PLP           R++ R+LD+ 
Sbjct: 111 DIVYVRGYAFITR---TGEFSMHVNELS-LATKSISPLPEKYHGLVDVETRYRQRYLDMI 166

Query: 135 RD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +  +  +  KR+ II+++R     + F+E  TP+L   +        V      G    
Sbjct: 167 MNPEVRADFKKRSVIISTIRRFFEEKGFLEVETPMLHPIAGGANAKPFVTFHNALGVERY 226

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+  +++   FR+E       P EF  ++   ++    D++   
Sbjct: 227 LRIAPELYLKRLVVGGFEAVYEMNRNFRNEGMDLTHNP-EFTSIEFYWAYHNYHDLMGIT 285

Query: 254 ENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
           E++   + E+      +         S  F RI Y  A+   G
Sbjct: 286 EDLFNVILEKLGMEKVINFDGMEIDFSKPFKRISYKKALVEIG 328



 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A   GMPP  G   GIDR+VMLL   K++R+V LFP
Sbjct: 453 KALGYGMPPVAGEGIGIDRLVMLLTDKKSIRDVVLFP 489


>gi|260184518|ref|ZP_05761992.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|289445193|ref|ZP_06434937.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis CPHL_A]
 gi|289418151|gb|EFD15352.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis CPHL_A]
          Length = 505

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 5/155 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           PLPV   +E  E  R + R++DL      + + + R  ++ ++R  +    F+E  TP+L
Sbjct: 147 PLPV-AHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVL 205

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T +    AR F   S       Y L  AP+ + +  +  GFD+ F++   FR+E   S 
Sbjct: 206 QTLAGGAAARPFATHSNALDIDLY-LRIAPELFLKRCIVGGFDKVFELNRVFRNEGADST 264

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
             P EF  L+   ++   DD       +++ V +E
Sbjct: 265 HSP-EFSMLETYQTYGTYDDSAVVTRELIQEVADE 298



 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 15/93 (16%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQ---------AFSNVGISKEVVENRFGGLYRAFQC 531
           ++DL   G E+A+G   + +S+ ++Q         A +       V++  F     A + 
Sbjct: 413 KWDLYLRGIELATG--YSELSDPVVQRERFADQARAAAAGDDEAMVLDEDF---LAALEY 467

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP  G   GIDR++M L G  ++RE  LFP+
Sbjct: 468 GMPPCTGTGMGIDRLLMSLTGL-SIRETVLFPI 499


>gi|210632478|ref|ZP_03297406.1| hypothetical protein COLSTE_01308 [Collinsella stercoris DSM 13279]
 gi|210159573|gb|EEA90544.1| hypothetical protein COLSTE_01308 [Collinsella stercoris DSM 13279]
          Length = 467

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 110/269 (40%), Gaps = 35/269 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACF--EIAKSVRSEWVLCI 73
           G  V ++GWV  VR      F+ + D   +   QVV N +S     EIA    S  ++C 
Sbjct: 18  GQTVTVAGWVKSVRDMKNFGFVTLNDGSCFKDLQVVMNRESLANYDEIAHQNVSAALVCT 77

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             L ++  A            EL+A +I    V E +  P +  ++   ++ F      L
Sbjct: 78  GELKLTPDAPQ--------PFELAATEI----VVEGVSAPDYPLQKKRATVEFLRTQQHL 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGS- 190
           R  T     V R R + +       ++  F+  +TPI+TAS  EGA +    + ++  + 
Sbjct: 126 RPRTNLFRAVFRVRSVAAAAIHRFFQDRGFVYVNTPIITASDCEGAGEMFHVTTIDPANP 185

Query: 191 -------------FYALPQAPQQYKQLL---MASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+    +     QL     A  F   +   P FR E+  + R   EF
Sbjct: 186 PLDDKGNVDFSQDFFGTAASLTVSGQLNAENFAMAFGDVYTFGPTFRAENSNTTRHAAEF 245

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           + ++ E++F +  D +N  E++L+ V  +
Sbjct: 246 WMIEPEIAFADLADDMNLAEDMLKYVIRD 274


>gi|315607902|ref|ZP_07882895.1| lysine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250371|gb|EFU30367.1| lysine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 602

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 5/63 (7%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           RA Q GMPP  GI  GIDR+ ML++G +N++E+ LFP  +    +    P + S+++  E
Sbjct: 480 RALQYGMPPTSGIGIGIDRLCMLMIGKENIQEIMLFPQMKPEAKM----PQS-SIKEWAE 534

Query: 587 LGL 589
           LG+
Sbjct: 535 LGV 537



 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 117/275 (42%), Gaps = 14/275 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +++D  G  QV    D  C E  K + ++    +  +    
Sbjct: 73  VVIAGRLMGRRVMGKASFAELQDSKGRIQVYIARDEICPEENKDLYNKVFKKLLDIGDFI 132

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             +       TG+I + A+ + +LS + + PLPV        + + + PE +R + R++D
Sbjct: 133 GVKGFVFRTQTGEISVHAKSLTLLSKSLK-PLPVVKYKDGVAYDKFDDPE-MRARQRYVD 190

Query: 133 LR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L   + +    +KR  ++ +MR       + E  TP L + +    AR F+         
Sbjct: 191 LVVNEGVKDTFLKRATVLRTMRRFFDEAGYTEVETPTLQSIAGGASARPFITHFNALNVD 250

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + ++
Sbjct: 251 MY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKYHNP-EFTCMELYVQYKDYNWMM 308

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
              E +L  +    +    V N    I +    RR
Sbjct: 309 AFTERLLETICTAVNGTTEVKNGDNVISFKAPFRR 343


>gi|315223369|ref|ZP_07865228.1| lysine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314946700|gb|EFS98689.1| lysine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 562

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 14/217 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +  +R  G   F  ++D  G  Q+  N D  C    K++ +E    +  L 
Sbjct: 45  GKQVVVAGRLMSLRVQGKASFATLQDSEGTMQLYFNRDEMCPTDDKTLYNEVFKKLLDLG 104

Query: 78  MSRSAETINANIITGQIELSAQKIEILS-VAEELPLP-------VFGEREYPESIRFKYR 129
               AE        G+  +  +   +LS V   LP+P       V      PE  R++ R
Sbjct: 105 DFIGAEGTLFITKMGEKTVLVKNFTLLSKVLRPLPMPKVDADGKVHDAFTDPEQ-RYRMR 163

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRV 186
           ++DL  +   K + +KRT++ N+MR       ++E  TPIL A  P G  AR F+     
Sbjct: 164 YVDLVVNPQVKEVFIKRTKLFNAMRQFFNDAGYLEVETPILQA-IPGGASARPFITHHNA 222

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
                Y +  A + Y + L+  GFD  ++ +  FR+E
Sbjct: 223 LDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNE 258



 Score = 43.9 bits (102), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VM L   ++++EV  FP
Sbjct: 454 RALEYGMPPTSGLGIGMDRLVMFLTNNESIQEVLFFP 490


>gi|294140784|ref|YP_003556762.1| asparaginyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293327253|dbj|BAJ01984.1| asparaginyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 466

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 106/275 (38%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           VGS + + GWV   R    GI FL + D             +CF+  + V         +
Sbjct: 16  VGSQITVRGWVRSRRDSKAGISFLAVYD------------GSCFDPIQGVVPNSLENYNN 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + E + +       EL    IE+    E+    P+  +R   E +R 
Sbjct: 64  EILKLTAGCSVIMTGEVVESPGKGQAFELQVTSIEVAGWVEDPDTYPMAAKRHSIEHLR- 122

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      E FI  STP++TAS  EGA +    S
Sbjct: 123 --ELAHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFQVS 180

Query: 185 --------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
                   R ++G       F+   A      Q      A    + +   P FR E+  +
Sbjct: 181 TLDMENLPRTDEGKVDYSEDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + DD+    E +L+  F+
Sbjct: 241 SRHLAEFWMVEPEVAFADLDDVAALAEQMLKFCFK 275


>gi|288924875|ref|ZP_06418812.1| lysine--tRNA ligase [Prevotella buccae D17]
 gi|288338662|gb|EFC77011.1| lysine--tRNA ligase [Prevotella buccae D17]
          Length = 584

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 5/63 (7%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           RA Q GMPP  GI  GIDR+ ML++G +N++E+ LFP  +    +    P + S+++  E
Sbjct: 462 RALQYGMPPTSGIGIGIDRLCMLMIGKENIQEIMLFPQMKPEAKM----PQS-SIKEWAE 516

Query: 587 LGL 589
           LG+
Sbjct: 517 LGV 519



 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 116/275 (42%), Gaps = 14/275 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +I+D  G  QV    D  C    K + ++    +  +    
Sbjct: 55  VVIAGRLMGRRVMGKASFAEIQDSKGRIQVYIARDEICPGENKDLYNKVFKKLLDIGDFI 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             +       TG+I + A+ + +LS + + PLPV        + + + PE +R + R++D
Sbjct: 115 GVKGFVFRTQTGEISVHAKSLTLLSKSLK-PLPVVKYKDGVAYDKFDDPE-MRARQRYVD 172

Query: 133 LR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L   + +    +KR  ++ +MR       + E  TP L + +    AR F+         
Sbjct: 173 LVVNEGVKDTFLKRATVLRTMRRFFDEAGYTEVETPTLQSIAGGASARPFITHFNALNVD 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + ++
Sbjct: 233 MY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKYHNP-EFTCMELYVQYKDYNWMM 290

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
              E +L  +    +    V N    I +    RR
Sbjct: 291 AFTERLLETICTAVNGTTEVKNGDNVISFKAPFRR 325


>gi|218548446|ref|YP_002382237.1| asparaginyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|218355987|emb|CAQ88603.1| asparaginyl tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|323976683|gb|EGB71771.1| asparaginyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324113739|gb|EGC07714.1| asparaginyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 466

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 54/280 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 63

Query: 76  LVMSRSAETINANIITG----------QIELSAQKIEILSVAEEL-PLPVFGEREYPESI 124
            V+  +  T  + I+TG          Q E+ A K+E+    E+    P+  +R    SI
Sbjct: 64  DVLRLT--TGCSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRH---SI 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +   
Sbjct: 119 EYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF- 177

Query: 183 PSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRD 222
             RV+      LP+  Q                    Q      A    + +   P FR 
Sbjct: 178 --RVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRA 235

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E+  + R   EF+ L+ E++F   +DI    E +L+ VF+
Sbjct: 236 ENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFK 275



 Score = 37.0 bits (84), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+ +    +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|166154123|ref|YP_001654241.1| lysyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166154998|ref|YP_001653253.1| lysyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|301335361|ref|ZP_07223605.1| lysyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|226710884|sp|B0B907|SYK_CHLT2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710885|sp|B0BAN6|SYK_CHLTB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|165930111|emb|CAP03594.1| lysyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165930986|emb|CAP06548.1| lysyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 526

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 4/150 (2%)

Query: 122 ESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           + IR++ R+ DL   + + K  + R+RI+  +R  M  ++F+E  TPIL T      A  
Sbjct: 171 KEIRYRKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQTVYGGAEATP 230

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+   +      +         K+LL+  G  R ++I   FR+E       P EF  ++ 
Sbjct: 231 FVTTLQALHAEMFLRISLEIALKKLLVG-GMSRVYEIGKVFRNEGIDRTHNP-EFTMIEA 288

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
             ++ + +D++  +EN++  +    +NG T
Sbjct: 289 YAAYWDYNDVMKCVENLVEYIVRALNNGET 318



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 24/33 (72%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP GG   GIDR+VM+L  A ++R+V  FP+
Sbjct: 485 GMPPAGGFGIGIDRLVMMLTDAASIRDVLFFPV 517


>gi|116253922|ref|YP_769760.1| lysyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|123081767|sp|Q1MBK9|SYK_RHIL3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|115258570|emb|CAK09674.1| putative lysyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 498

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 12/98 (12%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +++  CN +E+ +           R  M E + QA +     K++ E        A   G
Sbjct: 405 RFETYCNAWELGNAFSELNDPEEQRRRMVEQLEQAHARGEKEKQLDEE----FLDAIDQG 460

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR++MLL  A ++R+V LFP  ++  D
Sbjct: 461 MPPAGGLGIGVDRLIMLLTNAPSIRDVILFPARRSKAD 498



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 130/286 (45%), Gaps = 26/286 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           D+   DV   V ++G V+  R  G  +F+DI D  G  Q+ ++ D+   E     R+   
Sbjct: 56  DVETQDV---VTVAGRVYSSRNSG--MFMDIHDARGKIQIFSHKDTTPEE----ARALLP 106

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           +   G ++  +          G++ ++AQ I +L+ +  LP+P          +R++ R 
Sbjct: 107 MIDIGDIIGVTGSVRRTK--RGELTINAQTITMLTKSL-LPMPEKWHGLSDIELRYRKRH 163

Query: 131 LDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQ 188
           LD+  +   K    +R++I++ +R  M  + F+E  TP+L +      A  F       +
Sbjct: 164 LDIMTNEDSKLRFQQRSKILSGIRRFMENDGFMEVETPMLQSVYGGATAEPFKTHHNTLK 223

Query: 189 GSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
              Y L  AP+ + +  + SG  D+ F++   FR+E   +   P EF  ++   ++ + +
Sbjct: 224 LDMY-LRIAPELFLKRTLISGLTDKVFEVNRNFRNEGVSTRHNP-EFTMMECYWAYADYE 281

Query: 248 DILNTMENVLRGV------FEEFSNGN---TVSNNFLRICYDDAIR 284
           DI++ +E +   +        EF  G+   +    F R+   DA++
Sbjct: 282 DIMDLVERLFESLALSIHGTTEFPFGDKTMSFKGPFKRVPMPDAVK 327


>gi|332707653|ref|ZP_08427681.1| lysyl-tRNA synthetase, class II [Lyngbya majuscula 3L]
 gi|332353562|gb|EGJ33074.1| lysyl-tRNA synthetase, class II [Lyngbya majuscula 3L]
          Length = 572

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 123/265 (46%), Gaps = 15/265 (5%)

Query: 7   HSCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
            +  DLG   +V   V ++G +   R  G + F +I+D  G  Q+  +      ++A   
Sbjct: 52  QNYADLGNGEEVDVEVAVAGRIIARRVFGKLAFFNIQDETGTIQLYLDKKRITAKMADLP 111

Query: 66  RSEWVLCIDGLVMSRSAETINAN-----IITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            +  +L      ++ + + I A         G++ +  ++ +IL+ +  LPLP       
Sbjct: 112 NAFNILK----KLTDTGDIIGAKGTIKRTEKGELSIYVKEYDILTKSL-LPLPDKWHGLT 166

Query: 121 PESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGAR 178
               R++ R++DL  +  + +   +R +I  S+R  +  ++FIE  TP+L + +    AR
Sbjct: 167 DTEKRYRQRYVDLIVNPDVRETFRRRAKITASIRHYLNQQDFIEIETPVLQSEAGGADAR 226

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+      Q   Y L  A + + + L+  GF++ +++   FR+E   +   P EF  ++
Sbjct: 227 PFITYHNTLQMDLY-LRIATELHLKRLIVGGFEKVYELGRVFRNEGISTRHNP-EFTMIE 284

Query: 239 MEMSFVEQDDILNTMENVLRGVFEE 263
           +  ++ + + ++   EN++    +E
Sbjct: 285 IYQAYADYNQMMVLTENLISNAAKE 309



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 469 ALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPL 505


>gi|297518702|ref|ZP_06937088.1| lysyl-tRNA synthetase [Escherichia coli OP50]
          Length = 260

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 11/199 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL---GDIIGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                     TG++ +   ++ +L+ A   PLP        + +R++ R+LDL   D   
Sbjct: 125 RGTLFKTQ--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDLIANDKSR 181

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQA 197
           +  V R++I+ ++R  M+A  F+E  TP++    P G  AR F+          Y L  A
Sbjct: 182 QTFVVRSKILAAIRQFMVARGFMEVETPMMQV-IPGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQI 216
           P+ Y + L+  GF+R F+I
Sbjct: 240 PELYLKRLVVGGFERVFEI 258


>gi|256374484|ref|YP_003098144.1| lysyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255918787|gb|ACU34298.1| lysyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 503

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 12/236 (5%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +  G  V ++G V  +R  G + F  +R+  G T++ A    +  ++ +   ++W   +D
Sbjct: 62  TGTGEVVGVTGRVMFIRNTGKLAFATLREGDG-TELQAM--LSLNKVGEQALADWKSDVD 118

Query: 75  -GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +    E I +    G++ + A +  I + A   PLPV   +E  E  R + R++DL
Sbjct: 119 LGDHVFVRGEVITSR--RGELSVMADEWAITAKALR-PLPV-AHKELAEETRIRQRYVDL 174

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             R+     +  R +++ S+R       F E  TP+L T      AR F+  S       
Sbjct: 175 ILREQARDTVRNRAKLVRSLRESFHRRGFTEVETPMLQTLQGGAAARPFVTRSNALDIDL 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + L  AP+ Y +  +  G ++ F+I   FR+E   S   P EF  L+   ++   D
Sbjct: 235 F-LRIAPELYLKRCVVGGIEKVFEINRNFRNEGIDSSHSP-EFSMLEYYEAYATYD 288



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 21/98 (21%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVM--------LQAFSNVGISKEV----VENRFGGLY 526
           A ++DL   GFE+A+G      SE++        L+A + +G S +V    V+  F    
Sbjct: 411 AEKWDLYVRGFELATG-----YSELVDPVVERERLEAQARLGASGDVEAMPVDEDF---L 462

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           R+ + GMPP GG+  GIDR++M + G   +RE  LFP+
Sbjct: 463 RSLEYGMPPSGGVGMGIDRLLMAITGL-GIRETILFPL 499


>gi|150391907|ref|YP_001321956.1| asparaginyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|166980083|sp|A6TVS9|SYN_ALKMQ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|149951769|gb|ABR50297.1| asparaginyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 463

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 143/355 (40%), Gaps = 77/355 (21%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            G  +R+ GW+  +R      F+++ D   +   Q+V + D   F    S  S++ +   
Sbjct: 17  AGQSIRVEGWIRTLRASKAFGFIELNDGTFFKNIQIVFDEDLHNF----SDVSKFTIS-- 70

Query: 75  GLVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-ESIRFKYRF 130
                      +A II G +E++    Q  EI   A  + L     ++YP +  R  + +
Sbjct: 71  -----------SAIIIEGTLEITPGAKQPFEI--KATNVELEAHSHKDYPLQKKRHTFEY 117

Query: 131 L----DLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGARDFLVPS 184
           L     LR  +   + V R R I +         + F+   TPI+T S  EGA +     
Sbjct: 118 LRQIAHLRPRSNAFSAVFRVRSIAAFAIHQFFQEKGFVYTHTPIVTGSDAEGAGEMF--- 174

Query: 185 RVNQGSFYALPQAPQQY----------KQLLMASG----------FDRYFQIAPCFRDED 224
           RV+   F  +P   +Q           +  L  SG          F + +   P FR E+
Sbjct: 175 RVSTLDFKNIPLDEEQQVDFKKDFFGKETSLTVSGQLAAEAYALAFKKVYTFGPTFRAEN 234

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL----RGVFE------EFSNG------- 267
             + R   EF+ ++ E++F +  D +   E++L    R V E      EF N        
Sbjct: 235 SNTARHASEFWMIEPEIAFADLQDNMELAEDMLKYMIRYVMEQAPEELEFFNQFVDKGLI 294

Query: 268 ---NTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM-HNV-TEHFVHSEFRVFSK 316
              N V+N+ F ++ Y +A++       +   P+   H++ TEH  +   +VF K
Sbjct: 295 DRLNHVANSEFGKVTYTEAVKMLQESGEEFEYPVEWGHDLQTEHERYLTEKVFKK 349


>gi|22126636|ref|NP_670059.1| asparaginyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45441008|ref|NP_992547.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51595776|ref|YP_069967.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108806704|ref|YP_650620.1| asparaginyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108812726|ref|YP_648493.1| asparaginyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145599555|ref|YP_001163631.1| asparaginyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149366669|ref|ZP_01888703.1| asparaginyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153950923|ref|YP_001401523.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162419705|ref|YP_001606453.1| asparaginyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165924584|ref|ZP_02220416.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938931|ref|ZP_02227484.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166211575|ref|ZP_02237610.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167400005|ref|ZP_02305523.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419723|ref|ZP_02311476.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424283|ref|ZP_02316036.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170024873|ref|YP_001721378.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186894855|ref|YP_001871967.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218928560|ref|YP_002346435.1| asparaginyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229841386|ref|ZP_04461545.1| asparaginyl tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843491|ref|ZP_04463637.1| asparaginyl tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229903129|ref|ZP_04518242.1| asparaginyl tRNA synthetase [Yersinia pestis Nepal516]
 gi|270486924|ref|ZP_06203998.1| asparagine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294503399|ref|YP_003567461.1| asparaginyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|20139880|sp|P58697|SYN_YERPE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|59798513|sp|Q66CG7|SYN_YERPS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123072925|sp|Q1CA47|SYN_YERPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123073284|sp|Q1CGI7|SYN_YERPN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166232744|sp|A4TMZ6|SYN_YERPP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166980091|sp|A7FJU5|SYN_YERP3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|21959647|gb|AAM86310.1|AE013878_7 asparagine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45435867|gb|AAS61424.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51589058|emb|CAH20676.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108776374|gb|ABG18893.1| asparaginyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108778617|gb|ABG12675.1| asparaginyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115347171|emb|CAL20064.1| asparaginyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145211251|gb|ABP40658.1| asparaginyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149291043|gb|EDM41118.1| asparaginyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152962418|gb|ABS49879.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162352520|gb|ABX86468.1| asparaginyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165913078|gb|EDR31702.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165923644|gb|EDR40776.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|166207346|gb|EDR51826.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962464|gb|EDR58485.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050713|gb|EDR62121.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057132|gb|EDR66895.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169751407|gb|ACA68925.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186697881|gb|ACC88510.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|229678899|gb|EEO75002.1| asparaginyl tRNA synthetase [Yersinia pestis Nepal516]
 gi|229689838|gb|EEO81899.1| asparaginyl tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697752|gb|EEO87799.1| asparaginyl tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|262361441|gb|ACY58162.1| asparaginyl-tRNA synthetase [Yersinia pestis D106004]
 gi|270335428|gb|EFA46205.1| asparagine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294353858|gb|ADE64199.1| asparaginyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320015724|gb|ADV99295.1| asparaginyl tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 466

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 117/302 (38%), Gaps = 43/302 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV------- 65
           G + VGS V + GWV R R          RD       VA  D +CF+  ++V       
Sbjct: 12  GRAAVGSEVTVRGWV-RTR----------RDSKAGISFVAVYDGSCFDPLQAVVNNTLPN 60

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILS-VAEELPLPVFGEREYPES 123
             + VL +          T+ A+   GQ  E+ A  I ++  V +    P+  +R    S
Sbjct: 61  YQDEVLHLTTGCSVEVTGTVVASPGEGQSFEIQATAINVVGWVDDPDTYPMAAKRH---S 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181
           I +      LR  T     V R R  +     R   EN +   STP++TAS  EGA +  
Sbjct: 118 IEYLREVAHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMF 177

Query: 182 VPS--------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             S        R + G+      F+   A      Q      A    + +   P FR E+
Sbjct: 178 RVSTLDLENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD-DAI 283
             + R   EF+ ++ E++F   DD+    E +L+ VF+   N       F     D DA+
Sbjct: 238 SNTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERVDKDAV 297

Query: 284 RR 285
            R
Sbjct: 298 DR 299



 Score = 37.4 bits (85), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLISYVTGVQNVRDVIPFPRT 460


>gi|330997598|ref|ZP_08321444.1| lysine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329570309|gb|EGG52044.1| lysine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 575

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 123/276 (44%), Gaps = 41/276 (14%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----LCI 73
           ++G +   R  G   FL+++D  G  QV    D  C     ++  +V  + +     + I
Sbjct: 58  IAGRIMSRRIMGKASFLELQDSKGRIQVYVTRDDICPGENKDLYNTVFKKLLDLGDFVGI 117

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--------VFGEREYPESIR 125
            G V             TG+I +  Q++ +L+ +   PLP        V+   + PE +R
Sbjct: 118 KGFVFKTQ---------TGEISVHTQELTVLAKSLR-PLPIVKMKDGEVYDSFDDPE-LR 166

Query: 126 FKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLV 182
           ++ R++DL  ++ + +  +KR+ I+ ++R  +    + E  TPIL  S P G  AR F+ 
Sbjct: 167 YRQRYVDLIVNSGVKETFLKRSAILKTLRAALDEAGYTEVETPIL-QSIPGGASARPFIT 225

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + 
Sbjct: 226 HHNSLDIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKSHNP-EFTCMELYVQ 283

Query: 243 FVEQDDILNTMENVLR-------GVFEEFSNGNTVS 271
           + + + ++   E +L        G  E   +G T+S
Sbjct: 284 YKDYNWMMAFTEKLLERICIAVNGGTESVVDGKTIS 319



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP
Sbjct: 461 RALQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFP 497


>gi|271500177|ref|YP_003333202.1| asparaginyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270343732|gb|ACZ76497.1| asparaginyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 466

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 109/272 (40%), Gaps = 38/272 (13%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           V S V + GWV   R    GI F+ + D   +   Q V N + A ++      S+ +   
Sbjct: 16  VDSDVTVRGWVRTRRDSKAGISFIAVYDGSCFDSLQAVVNNNLANYQ------SDILRLT 69

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132
            G  +  + + + +       EL A +++++  V +    P+  +R    SI +      
Sbjct: 70  TGCSVEVTGKVVESPGEGQSFELLATELKVVGWVDDPDTYPMAAKRH---SIEYLREVAH 126

Query: 133 LRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T     V R R  +     R   +N F   STPI+TAS  EGA +     RV+   
Sbjct: 127 LRPRTNLIGAVARVRHTLAQAIHRFFHQNGFYWVSTPIITASDTEGAGEMF---RVSTLD 183

Query: 191 FYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
              LP+  Q                    Q      A    + +   P FR E+  + R 
Sbjct: 184 LENLPRDDQGKVDFSEDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRH 243

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             EF+ ++ E++F   DD+    EN+L+ VF+
Sbjct: 244 LAEFWMIEPEVAFATLDDVAALAENLLKFVFK 275


>gi|213961690|ref|ZP_03389956.1| lysyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213955479|gb|EEB66795.1| lysyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 562

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 15/251 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +  +R  G   F  ++D  G  Q+  N D  C    K++ +E    +  L 
Sbjct: 45  GKQVVVAGRLMSLRVQGKASFATLQDSEGTMQLYFNRDEMCPGEDKTLYNEVFKKLLDLG 104

Query: 78  MSRSAETINANIITGQIELSAQKIEILS-VAEELPLP-------VFGEREYPESIRFKYR 129
                E        G+  ++ +   +LS V   LP+P       V      PE  R++ R
Sbjct: 105 DFIGVEGYLFITKMGEKTVAVKNFTLLSKVLRPLPMPKVDADGKVHDAFTDPEQ-RYRMR 163

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRV 186
           ++DL  +   K + +KRT++ N+MR       ++E  TP+L A  P G  AR F+     
Sbjct: 164 YVDLVVNPHVKEVFIKRTKLFNAMRQFFNDAGYLEVETPVLQA-IPGGASARPFITHHNA 222

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ + 
Sbjct: 223 LDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKDY 280

Query: 247 DDILNTMENVL 257
             ++N  E +L
Sbjct: 281 HWMMNFTERLL 291



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 454 RALEYGMPPTSGLGIGMDRLIMFLTNNESIQEVLFFP 490


>gi|116334579|ref|YP_796106.1| asparaginyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|116099926|gb|ABJ65075.1| asparaginyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 463

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 114/286 (39%), Gaps = 36/286 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V L GWV  VR    + F+++ D   I   Q+V   D   + E+ K   S  +  +  +V
Sbjct: 21  VTLHGWVKTVRGSKRVGFIELSDGSTIKHAQIVMQSDLENYAEMTKLPLSSTIKVVGTVV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+          +E+ AQ++ +L  A +   P+  ++   E +R     L  R +T
Sbjct: 81  YTPDAKQ--------PLEIHAQEV-VLEGASDNDYPLQKKKHSYEYLR-TMAHLRPRTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            +     R+    ++   +    F   +TPI+T+S  EGA +     RV       LP+ 
Sbjct: 131 FYAVFRIRSLAAFAIHQYLQEHGFTYVNTPIITSSDSEGAGEMF---RVTTLDMNNLPKT 187

Query: 198 PQ----------QYKQLLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                       + +  L  SG              +   P FR E+  + R   EF+ +
Sbjct: 188 EDGRVDDHEDFFKKETNLTVSGQLPVEAFALALRNVYTFGPAFRAENSHTSRHASEFWMI 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
           + EM+F +  D +N  E +L+ V +   +       FL    DD +
Sbjct: 248 EPEMAFADLQDTINEAEGLLKYVVQYLLDHAQDELAFLDSAVDDDL 293


>gi|167756625|ref|ZP_02428752.1| hypothetical protein CLORAM_02162 [Clostridium ramosum DSM 1402]
 gi|237733914|ref|ZP_04564395.1| asparaginyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|167702800|gb|EDS17379.1| hypothetical protein CLORAM_02162 [Clostridium ramosum DSM 1402]
 gi|229382995|gb|EEO33086.1| asparaginyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 476

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 25/253 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            +V L GWV   R +G + F+ + D  ++   QVV        E   S   E    ID L
Sbjct: 41  EYVELEGWVRTNRNNGKLGFIALNDGTYFKNLQVVYT------EAEISNYEE----IDKL 90

Query: 77  VMSRSAETINANIITGQ----IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
               S   +    +T +     E+ A +IEI    +E   P+  +R   E +R +   L 
Sbjct: 91  STGSSIRVVGKLKLTPEGKQPFEVEATEIEIEGKCDE-DFPLQKKRHSFEYMR-EIPHLR 148

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R +T +     R+ +  ++     ++ F+   TPI+T +  EGA +    + ++  +F 
Sbjct: 149 PRANTFYAIFRLRSVLSMAIHEFFQSQGFVYVHTPIITGNDGEGAGEMFRATTIDGTNFE 208

Query: 193 -------ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                  A      Q      A  F   +   P FR E+  + R   EF+ ++ E++F +
Sbjct: 209 DDFFEKEAFLTVTGQLHVEAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMIEPEIAFAD 268

Query: 246 QDDILNTMENVLR 258
            +D ++ +E++++
Sbjct: 269 LEDDMDLIEDMVK 281



 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 15/89 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  G  R    +V+ +     G+SK+ ++      R+GG      C    H
Sbjct: 391 DLLVPGIGELVGGSQREERYDVLERIMDEKGMSKDGLQWYMDLRRYGG------C---KH 441

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G   G DR +M L G +N+R+V  FP +
Sbjct: 442 AGFGLGFDRFLMYLTGMQNIRDVEPFPRT 470


>gi|300744054|ref|ZP_07073073.1| lysine--tRNA ligase [Rothia dentocariosa M567]
 gi|300379779|gb|EFJ76343.1| lysine--tRNA ligase [Rothia dentocariosa M567]
          Length = 1107

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 28/266 (10%)

Query: 4   YRTHSCGDLGVSD----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC- 58
           Y T    D G+SD     G F  LSG V  +R HGG+IFL + +     Q++A       
Sbjct: 649 YSTVQVHD-GLSDHTLPSGEFT-LSGRVRFIRNHGGVIFLTLSEEGKQVQIIAERSLVSE 706

Query: 59  --FEIAKS-VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
             F++ KS V +  +L + G   +    T  A++I    +++A+ +         P+P +
Sbjct: 707 REFQLLKSAVDTGDILLVTGTAGASRIGT--ASVIVHGWQMAAKCLH--------PIP-Y 755

Query: 116 GEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASS 173
           G    PE+ R + R  DL       +N+  R+ +I ++R  +    F E  TPIL T   
Sbjct: 756 GALNDPEA-RIRKRSTDLLVHPQQLENLRMRSSLITAIRRTLDDAGFTEVETPILNTIHG 814

Query: 174 PEGARDFLVPSRVNQ-GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
              AR F   + +N  G+   L  AP+ Y + L+  G    +++   FR+E   +   P 
Sbjct: 815 GASARPF--KTFINAYGADLTLRIAPELYLKRLVVGGLGAVYELGRDFRNEGADATHNP- 871

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLR 258
           EF  L+    + +   +    E +++
Sbjct: 872 EFTVLEAYKPYADYTVMRKLTETLIK 897


>gi|298372519|ref|ZP_06982509.1| lysine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275423|gb|EFI16974.1| lysine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 567

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 25/215 (11%)

Query: 92  GQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLDLRRDTLHKNI- 142
           G+I + AQ++ +LS +   PLP+        F   + PE  R++ R++DL  +   K+I 
Sbjct: 125 GEISVHAQELTVLSKSIR-PLPIVKYKDNEAFDAFDDPEQ-RYRQRYVDLVVNDGIKDIF 182

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           VKRT I  SMR    ++N+IE  TPIL        AR F+          Y L  A + Y
Sbjct: 183 VKRTNIYRSMREYFDSQNYIEVETPILQPIPGGAAARPFITHHNALDIPLY-LRIANELY 241

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+  GF+  ++ +  FR+E       P EF  +++ +++ + + ++   E ++  + 
Sbjct: 242 LKRLIVGGFEGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKDYNWMMEFTEKMVEKIC 300

Query: 262 EEFSNGNT---VSNN-------FLRICYDDAIRRY 286
            +  NG T   V +N       F R+   DAI+ +
Sbjct: 301 LDV-NGTTELKVGDNIISFKTPFKRVTMLDAIKEH 334



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VML+ G   ++EV LFP
Sbjct: 459 RALEYGMPPTSGMGIGMDRLVMLMTGQAAIQEVLLFP 495


>gi|332092538|gb|EGI97611.1| asparaginyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 466

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 54/280 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 63

Query: 76  LVMSRSAETINANIITG----------QIELSAQKIEILSVAEEL-PLPVFGEREYPESI 124
            V+  +  T  + I+TG          Q E+ A K+E+    E+    P+  +R    SI
Sbjct: 64  DVLRLT--TGCSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRH---SI 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +   
Sbjct: 119 EYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF- 177

Query: 183 PSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRD 222
             RV+      LP+  Q                    Q      A    + +   P FR 
Sbjct: 178 --RVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRA 235

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E+  + R   EF+ L+ E++F   +DI    E +L+ VF+
Sbjct: 236 ENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFK 275



 Score = 37.0 bits (84), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+ +    +G++KE   N +   YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKE---NYW--WYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|281178061|dbj|BAI54391.1| asparaginyl-tRNA synthetase [Escherichia coli SE15]
          Length = 466

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 54/280 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 63

Query: 76  LVMSRSAETINANIITG----------QIELSAQKIEILSVAEEL-PLPVFGEREYPESI 124
            V+  +  T  + I+TG          Q E+ A K+E+    E+    P+  +R    SI
Sbjct: 64  DVLRLT--TGCSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPNTYPMAAKRH---SI 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +   
Sbjct: 119 EYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF- 177

Query: 183 PSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRD 222
             RV+      LP+  Q                    Q      A    + +   P FR 
Sbjct: 178 --RVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRA 235

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E+  + R   EF+ L+ E++F   +DI    E +L+ VF+
Sbjct: 236 ENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFK 275


>gi|167032114|ref|YP_001667345.1| lysyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|189082963|sp|B0KRL5|SYK_PSEPG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166858602|gb|ABY97009.1| lysyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 500

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 22/261 (8%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E   +V++ W L   G ++S  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLPEETLAAVKT-WDL---GDIIS--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCR 155
              + +L+ +   PLP           R++ R++DL    +T H   V R+++I+ +R  
Sbjct: 135 MTNVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRV-RSQVISHIRKF 192

Query: 156 MIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           +I  +F+E  TP+L T      A+ F         + + L  AP+ Y + L+  GF++ F
Sbjct: 193 LIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMF-LRIAPELYLKRLVVGGFEKVF 251

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGN 268
           +I   FR+E   +   P EF  L+   ++ +  D ++  E + R + +      +   G+
Sbjct: 252 EINRNFRNEGVSTRHNP-EFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGSTDVPYGD 310

Query: 269 TV---SNNFLRICYDDAIRRY 286
            V      F+R+   D+I +Y
Sbjct: 311 KVFHFGEPFVRLSVFDSILKY 331



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 458 RALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFP 494


>gi|15594447|ref|NP_212235.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|3915060|sp|O51128|SYN_BORBU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|2687998|gb|AAC66501.1| asparaginyl-tRNA synthetase (asnS) [Borrelia burgdorferi B31]
          Length = 466

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 106/265 (40%), Gaps = 34/265 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF--EIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F  +  K + +   + 
Sbjct: 18  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 77

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 78  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +T       R +I   +        F   +TPI+T++  EGA +     RV+   F 
Sbjct: 130 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMF---RVSTLKFN 186

Query: 193 ALPQA-------------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            L  A                     Q      A    + +   P FR E+  + R   E
Sbjct: 187 KLNNALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASE 246

Query: 234 FYQLDMEMSFVEQDDILNTMENVLR 258
           F+ ++ EM+F + +D +   E++L+
Sbjct: 247 FWMIEPEMAFYKLNDNIALAEDLLK 271


>gi|82777546|ref|YP_403895.1| asparaginyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|331682441|ref|ZP_08383060.1| asparagine--tRNA ligase [Escherichia coli H299]
 gi|123742114|sp|Q32E51|SYN_SHIDS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|81241694|gb|ABB62404.1| asparagine tRNA synthetase [Shigella dysenteriae Sd197]
 gi|331080072|gb|EGI51251.1| asparagine--tRNA ligase [Escherichia coli H299]
          Length = 466

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 54/280 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 63

Query: 76  LVMSRSAETINANIITG----------QIELSAQKIEILSVAEEL-PLPVFGEREYPESI 124
            V+  +  T  + I+TG          Q E+ A K+E+    E+    P+  +R    SI
Sbjct: 64  DVLRLT--TGCSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRH---SI 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +   
Sbjct: 119 EYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF- 177

Query: 183 PSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRD 222
             RV+      LP+  Q                    Q      A    + +   P FR 
Sbjct: 178 --RVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRA 235

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E+  + R   EF+ L+ E++F   +DI    E +L+ VF+
Sbjct: 236 ENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFK 275


>gi|300819171|ref|ZP_07099372.1| asparaginyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300528190|gb|EFK49252.1| asparaginyl-tRNA synthetase [Escherichia coli MS 107-1]
          Length = 466

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 54/280 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 63

Query: 76  LVMSRSAETINANIITG----------QIELSAQKIEILSVAEEL-PLPVFGEREYPESI 124
            V+  +  T  + I+TG          Q E+ A K+E+    E+    P+  +R    SI
Sbjct: 64  DVLRLT--TGCSVIVTGKVVASPGQGQQFEIQASKVEVTGWVEDPDTYPMAAKRH---SI 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +   
Sbjct: 119 EYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF- 177

Query: 183 PSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRD 222
             RV+      LP+  Q                    Q      A    + +   P FR 
Sbjct: 178 --RVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRA 235

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E+  + R   EF+ L+ E++F   +DI    E +L+ VF+
Sbjct: 236 ENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFK 275



 Score = 37.0 bits (84), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+ +    +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|293401335|ref|ZP_06645479.1| asparagine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305461|gb|EFE46706.1| asparagine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 461

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 36/261 (13%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D   +V+L GW+   R  G + F+++ D               F  A+ V   ++  +  
Sbjct: 23  DSLEYVQLQGWIRTNRCSGKLGFIELND------------GTYFRNAQLV---YMQELKN 67

Query: 76  LVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-ESIRFKYRFL 131
                   T  A  +TG+++L+    Q  EI  V  E  L    +R+YP +  R  + ++
Sbjct: 68  FAEVEKYPTGAAITVTGKLKLTPDGKQPFEI--VVTEAVLEGDCDRDYPLQKKRHSFEYM 125

Query: 132 ----DLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARD-FLVPS 184
                LR        + R R + SM      +N  F+   TP++T +  EGA + F V +
Sbjct: 126 REIPHLRPRANSFYAIFRLRSVLSMAIHEFFQNQGFVYVHTPVITGNDAEGAGETFTVTT 185

Query: 185 RVNQ-------GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R +Q       G   +L  + Q + +   A  F   +   P FR E+  + R   EF+ +
Sbjct: 186 REDQKYEEDFFGKHASLTVSGQLHVESF-AMAFRDVYTFGPTFRAENSNTTRHASEFWMI 244

Query: 238 DMEMSFVEQDDILNTMENVLR 258
           + E++F + +D ++ +E++++
Sbjct: 245 EPEIAFADLEDDMDLIEDMVK 265


>gi|302918070|ref|XP_003052579.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733519|gb|EEU46866.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 609

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/269 (20%), Positives = 122/269 (45%), Gaps = 14/269 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPD-----SACFEIA-KSV 65
           G S     +++   VH  R  G  ++F D+R      Q++         +  FE   + +
Sbjct: 118 GESVQDKIIQIGARVHGKRASGSKLLFYDVRTEGVKVQILCQAQEVREGAPAFEDQHEHL 177

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESI 124
           R   ++ I G     + +        G++ + A ++ +L+     LP   +G ++  +  
Sbjct: 178 RRGDIIGIIGYPGRTAPKNKIEKGEEGELSIFATEVVLLTPCLHALPDDHYGFKDLEQ-- 235

Query: 125 RFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182
           RF+ R+LDL  +   +N+ V R+++I  +R      +F+E  TP++   +    A+ F  
Sbjct: 236 RFRKRYLDLICNEKARNVFVTRSKMITWIRRYFDERDFVEVETPMMNQIAGGATAKPFTT 295

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y +  AP+ Y ++L+  G +R ++I   FR+E       P EF  ++   +
Sbjct: 296 HHNEYDMQMY-MRVAPELYLKMLVVGGLNRVYEIGRQFRNEGADLTHNP-EFTTIEFYQA 353

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           + + +D+++  E+++ G+ +  + G   +
Sbjct: 354 YADVNDLMDITEDMVSGLVKYLTGGYVTT 382



 Score = 44.3 bits (103), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQLRE 586
           + + G+PP GG   GIDR+VM L     +REV  FP M  +  D    +   V +E + E
Sbjct: 544 SLEYGLPPTGGWGMGIDRMVMFLTDNYTIREVLAFPFMKDDKADAKKLAAEVVGIEPIPE 603

Query: 587 LGL 589
            G+
Sbjct: 604 EGI 606


>gi|113867187|ref|YP_725676.1| lysyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|123134219|sp|Q0KCG3|SYK_RALEH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|113525963|emb|CAJ92308.1| Lysyl-tRNA synthetase (class II) [Ralstonia eutropha H16]
          Length = 514

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 109/240 (45%), Gaps = 11/240 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q     D    E+  + +  W L   G ++S 
Sbjct: 74  VAIAGRMMLKRVMGKASFATVQDGSGQIQFYITRDKVGEEVYAAFK-HWDL---GDIISA 129

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E    N   G++ +  +++ +LS +   PLP        + ++++ R++DL      +
Sbjct: 130 RGELFRTN--KGELSVQVRELRLLSKSLR-PLPDKFHGLADQEMKYRQRYVDLIVSPETR 186

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  + RT  I+S+R  M    F+E  TP+L        A+ F+          + +  AP
Sbjct: 187 NTFRARTNAISSLRRHMADAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMF-MRIAP 245

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E+++R
Sbjct: 246 ELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDFTEDLIR 304



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    + +E     F      K+  +     F   Y RA + GMPP 
Sbjct: 422 RFELFITGREIANGFSELNDAEDQADRFRKQVEQKDAGDEEAMYFDADYIRALEYGMPPT 481

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + N+R+V LFP
Sbjct: 482 GGCGIGIDRLVMLLTDSPNIRDVILFP 508


>gi|148549432|ref|YP_001269534.1| lysyl-tRNA synthetase [Pseudomonas putida F1]
 gi|166229819|sp|A5W890|SYK_PSEP1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|148513490|gb|ABQ80350.1| lysyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 500

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 22/261 (8%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E   +V++ W L   G ++S  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLPEETLAAVKT-WDL---GDIIS--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCR 155
              + +L+ +   PLP           R++ R++DL    +T H   V R+++I+ +R  
Sbjct: 135 MTNVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRV-RSQVISHIRKF 192

Query: 156 MIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           +I  +F+E  TP+L T      A+ F         + + L  AP+ Y + L+  GF++ F
Sbjct: 193 LIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMF-LRIAPELYLKRLVVGGFEKVF 251

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGN 268
           +I   FR+E   +   P EF  L+   ++ +  D ++  E + R + +      +   G+
Sbjct: 252 EINRNFRNEGVSTRHNP-EFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGSTDVPYGD 310

Query: 269 TV---SNNFLRICYDDAIRRY 286
            V      F+R+   D+I +Y
Sbjct: 311 KVFHFGEPFVRLSVFDSILKY 331



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 458 RALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFP 494


>gi|325104262|ref|YP_004273916.1| lysyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324973110|gb|ADY52094.1| lysyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 572

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 114/260 (43%), Gaps = 33/260 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---------VL 71
           + L+G +   R  G   F++++D  G  Q     D  C    K++ +            +
Sbjct: 54  ISLAGRIMTRRIMGNASFVELQDATGRIQAYIRRDDVCPGEDKTLYNTVFKKLLDIGDYI 113

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---------PE 122
            I G V +           TG+I +   + ++LS + + PLP+    +          PE
Sbjct: 114 GIKGYVFTTQ---------TGEISIHVTEFKVLSKSLK-PLPIVKRDDDGNIYDGFTDPE 163

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
            +R++ R++DL  +  +K I K R+++I++MR    A  ++E  TPIL A      AR F
Sbjct: 164 -MRYRMRYVDLTVNPEYKEIFKTRSKVISTMRSYFDANGWMEVETPILQAIHGGAAARPF 222

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                      + L  A + Y + L+ +GFD  ++    FR+E       P EF  +++ 
Sbjct: 223 NTYHNTLDMPLF-LRIANELYLKRLIVAGFDGVYEFGKMFRNEGMDRTHNP-EFTSMEIY 280

Query: 241 MSFVEQDDILNTMENVLRGV 260
           +++ +   ++  +E  L  V
Sbjct: 281 VAYKDYIWMMGMVEECLEKV 300



 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           R+ + GMPP  G+  GIDR+VML+    +++EV  FP
Sbjct: 460 RSLEYGMPPTAGLGIGIDRLVMLMTNQSSIQEVLFFP 496


>gi|149235416|ref|XP_001523586.1| hypothetical protein LELG_05002 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452565|gb|EDK46821.1| hypothetical protein LELG_05002 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 547

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 67/124 (54%), Gaps = 5/124 (4%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           I+ ++++I ++R   I + F+E  TPIL++  +   A+ FL   + +      L  AP+ 
Sbjct: 219 IIVKSQVIQAIRQFFINKGFLEMQTPILSSLGTGANAQPFLTKFKDDH---VQLRVAPEL 275

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           + + ++ +GF++ F+I   FR+E       P EF   +   SF   ++++N  E +L+ +
Sbjct: 276 WLKKMVIAGFEKIFEIGNNFRNEGIDQSHNP-EFTSCEFYQSFTSLEELMNITEELLKQI 334

Query: 261 FEEF 264
           F +F
Sbjct: 335 FHKF 338


>gi|259908902|ref|YP_002649258.1| asparaginyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224964524|emb|CAX56034.1| Asparaginyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283478896|emb|CAY74812.1| asparaginyl-tRNA synthetase [Erwinia pyrifoliae DSM 12163]
 gi|310767197|gb|ADP12147.1| asparaginyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 466

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 108/280 (38%), Gaps = 46/280 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G   V S V + GWV R R          RD       +A  D +CF   ++V +  +  
Sbjct: 12  GRVTVDSEVTVRGWV-RTR----------RDSKAGISFIAVYDGSCFNPVQAVVNNSLNN 60

Query: 73  IDGLVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESI 124
               V+  +  T  + +ITG++  S    Q  EI +   E+   V     YP      SI
Sbjct: 61  YQDEVLRLT--TGCSVVITGKVVASPGQGQSFEIQATEVEVVGWVDDPDTYPMAAKRHSI 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +   
Sbjct: 119 EYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF- 177

Query: 183 PSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRD 222
             RV+      LP+ P+                    Q      AS   + +   P FR 
Sbjct: 178 --RVSTLDMENLPRTPEGKVNYDEDFFGKEAFLTVSGQLNGETYASAISKIYTFGPTFRA 235

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E+  + R   EF+ L+ EM+F + +D     E +L+  F+
Sbjct: 236 ENSHTSRHLAEFWMLEPEMAFADLEDNAALAEAMLKYAFK 275



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    EV+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLEVLDARLAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIAFPRT 460


>gi|223889109|ref|ZP_03623698.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|224534013|ref|ZP_03674597.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|223885358|gb|EEF56459.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|224512849|gb|EEF83216.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
          Length = 462

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 106/265 (40%), Gaps = 34/265 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF--EIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F  +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +T       R +I   +        F   +TPI+T++  EGA +     RV+   F 
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMF---RVSTLKFN 182

Query: 193 ALPQA-------------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            L  A                     Q      A    + +   P FR E+  + R   E
Sbjct: 183 KLNNALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASE 242

Query: 234 FYQLDMEMSFVEQDDILNTMENVLR 258
           F+ ++ EM+F + +D +   E++L+
Sbjct: 243 FWMIEPEMAFYKLNDNIALAEDLLK 267


>gi|312149258|gb|ADQ29329.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 462

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 106/265 (40%), Gaps = 34/265 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF--EIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F  +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKIHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +T       R +I   +        F   +TPI+T++  EGA +     RV+   F 
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMF---RVSTLKFN 182

Query: 193 ALPQA-------------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            L  A                     Q      A    + +   P FR E+  + R   E
Sbjct: 183 KLNNALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASE 242

Query: 234 FYQLDMEMSFVEQDDILNTMENVLR 258
           F+ ++ EM+F + +D +   E++L+
Sbjct: 243 FWMIEPEMAFYKLNDNITLAEDLLK 267


>gi|90408625|ref|ZP_01216779.1| asparaginyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310269|gb|EAS38400.1| asparaginyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 466

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/331 (22%), Positives = 128/331 (38%), Gaps = 65/331 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV-------RSE 68
           +GS V + GW+   R    GI FL I D             +CF+  ++V        S 
Sbjct: 16  IGSQVTVKGWIRTRRDSKAGISFLAIYD------------GSCFDPIQAVVPATLENYSN 63

Query: 69  WVLCID-GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRF 126
            VL +  G  +  + E + +       E+ A K+ ++  V +    P+  +R    SI +
Sbjct: 64  DVLSLTAGCSVEVTGELVESPGKGQSFEIQATKVVVVGFVQDPDTYPMSAKRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  + +++        F   STPI+T S  EGA +    S
Sbjct: 121 MREHAHLRPRTNMFGAVTRVRNCLSHAIHNFFYERGFNWISTPIITGSDCEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          YKQ        +  SG              +   P FR E+  +
Sbjct: 181 TLDLENLPKTADGKVDYKQDFFGKETFMTVSGQLNAETYACALSNVYTFGPTFRAENSHT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF----EEFSNG---------------- 267
            R   EF+ ++ E++F + +D+    E++L+ VF    EE ++                 
Sbjct: 241 TRHLAEFWMVEPEIAFADLNDVAQLAEDMLKYVFKAVLEERADDMAFFAQRVDKEAISRL 300

Query: 268 -NTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
            N ++++F+R+ Y +AI        D   P+
Sbjct: 301 ENMINSDFVRMDYSEAIEILENCGQDFEYPV 331



 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 7/91 (7%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF-QCGMPPHGGIA 540
           D++  G  EI  G  R    E + +  + +G++K+         YR   + G  PH G  
Sbjct: 381 DVIAPGIGEIIGGSQREENLEALDKRLAEMGLNKDDY-----SWYRDLRKYGTVPHAGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G +R+V  + G +N+R+V  FP +    D 
Sbjct: 436 LGFERLVSYVTGVQNIRDVIAFPRAPGSADF 466


>gi|224541993|ref|ZP_03682532.1| hypothetical protein CATMIT_01166 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525050|gb|EEF94155.1| hypothetical protein CATMIT_01166 [Catenibacterium mitsuokai DSM
           15897]
          Length = 494

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG+  GIDR+VMLL G + +REV LFP  +N
Sbjct: 454 ALEYGLPPTGGMGMGIDRLVMLLTGQETIREVILFPHMKN 493


>gi|160914297|ref|ZP_02076516.1| hypothetical protein EUBDOL_00305 [Eubacterium dolichum DSM 3991]
 gi|158433770|gb|EDP12059.1| hypothetical protein EUBDOL_00305 [Eubacterium dolichum DSM 3991]
          Length = 482

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 34/260 (13%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D   +V+L GW+   R  G + F+++ D               F  A+ V   ++  +  
Sbjct: 45  DSMEYVQLQGWIRTNRCSGKLGFIELND------------GTYFRNAQLV---YMQELKN 89

Query: 76  LVMSRSAETINANIITGQIELSAQ-KIEILSVAEELPLPVFGEREYP-ESIRFKYRF--- 130
                   T  A  ITG+++L+ Q K     V  E  L    +R+YP +  R  + +   
Sbjct: 90  FSEVEKYPTGAAVTITGKLKLTPQGKQPFEIVVTEAVLEGDCDRDYPLQKKRHSFEYMRE 149

Query: 131 ---LDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSR 185
              L  R +T +   + R R + SM      ++  F+   TPI+T +  EGA +    + 
Sbjct: 150 IPHLRPRANTFYA--IFRLRSVLSMAIHEFFQDQGFVYVHTPIITGNDGEGAGEMFRATT 207

Query: 186 VNQGSFY-------ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           ++   F        +      Q      A  F   +   P FR E+  + R   EF+ ++
Sbjct: 208 IDNTEFENDFFGKESFLTVTGQLHVEAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMIE 267

Query: 239 MEMSFVEQDDILNTMENVLR 258
            E++F + +D +N +E++++
Sbjct: 268 PEIAFADLEDNMNLIEDMIK 287



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 15/89 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  G  R    +V+ +  S +G++K+ ++      RFGG      C    H
Sbjct: 397 DLLVPGVGELVGGSQREERYDVLDKRMSEMGMTKDNLQWYMDLRRFGG------C---RH 447

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G   G DR++M L G +N+R+V  FP +
Sbjct: 448 AGFGLGFDRLLMYLTGMQNIRDVEPFPRT 476


>gi|294781999|ref|ZP_06747331.1| asparagine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294481810|gb|EFG29579.1| asparagine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 461

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/304 (21%), Positives = 120/304 (39%), Gaps = 51/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV ++R      F+++ D   +   Q+V       F+    +     + + G ++
Sbjct: 19  IELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEISRLSIASTIKVKGTLV 78

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                       +GQ +E+ A++IEI   A+ L  P+  +R   E +R K   L  R +T
Sbjct: 79  KSEG--------SGQDLEVKAKEIEIFQKAD-LEYPLQNKRHTFEYLRTKAH-LRARTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVN- 187
                  R+ +  ++       NF+    PI+T S  EGA +           VP + N 
Sbjct: 129 FSAVFRVRSVLAYALHKFFQENNFVYVHAPIITGSDAEGAGEMFRITTLDLNKVPKKENG 188

Query: 188 ----QGSFYALPQAPQQYKQLLMAS---GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+          QL + +    F   +   P FR E   + R   EF+ ++ E
Sbjct: 189 EVDFSKDFFGKSTNLTVSGQLNLETFCAAFRNVYTFGPTFRAEYSNTARHASEFWMVEPE 248

Query: 241 MSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLRICY 279
           ++F +   ++   E +++ + +          EF N            N ++N+F R+ Y
Sbjct: 249 IAFGDIFALMELAEAMVKYIIKYVMDNCPEEMEFFNSFIEKGLFDKLNNVLNNDFGRVTY 308

Query: 280 DDAI 283
            +AI
Sbjct: 309 TEAI 312



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 15/91 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  EI  G  R    E++ +    +G+++E  E      RFG           PH
Sbjct: 376 DLLAPGIGEIIGGSQREDSYELLSKRMKELGLNEEDYEFYLDLRRFGSF---------PH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R++M L G +N+R+V  FP + N
Sbjct: 427 SGYGLGFERMMMYLTGMQNIRDVIPFPRTPN 457


>gi|269837140|ref|YP_003319368.1| lysyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786403|gb|ACZ38546.1| lysyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 513

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 117/280 (41%), Gaps = 31/280 (11%)

Query: 2   HRYRTHSCGD-----------LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           H +RTH+  +           L        + ++G V  VR  G  +F  IRD  G  QV
Sbjct: 29  HSHRTHTAEEALARFTEIEPTLDTEHDPETITVAGRVTAVRDMGKSVFAHIRDGSGAIQV 88

Query: 51  VANP----DSACFEIAKSVR-SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105
                   D A     + +   +++     L  +R          TG++ +  +   +L+
Sbjct: 89  YLRRNVVGDDALAHFKRFIDLGDFIEAEGNLFRTR----------TGEVTVEVKAFRLLA 138

Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIEC 164
            A   P   +   +  E+ R++ R+ DL  +   + I V R   I ++R  +    F+E 
Sbjct: 139 KAINPPPEKWHGLQDVET-RYRQRYADLMANEETRRIFVIRANAIRAIRRFLDERGFLEV 197

Query: 165 STPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP+L        AR F         +FY L  A + Y + L+  G++R ++IA  FR+E
Sbjct: 198 ETPVLQPLYGGAAARPFTTYYNALDQTFY-LRIADELYLKRLLVGGYERVYEIAKDFRNE 256

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
              +   P EF  L+  M++ +  D++  +E +   V E+
Sbjct: 257 GIDARHSP-EFTMLEFYMAYADYHDVMELVEEMFVYVAEQ 295



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPS 577
           A   GMPP GG   GIDR+ MLL   +N+REV LFP +      +L G P+
Sbjct: 454 ALMYGMPPTGGFGLGIDRLTMLLTDQQNIREVILFPHLRSKPTPILAGLPT 504


>gi|83748478|ref|ZP_00945500.1| Lysyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|83724889|gb|EAP72045.1| Lysyl-tRNA synthetase [Ralstonia solanacearum UW551]
          Length = 510

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 123/284 (43%), Gaps = 22/284 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q     D    E+  + +  W L   G +++ 
Sbjct: 70  VAIAGRMMLKRVMGKASFATVQDGSGQIQFYITRDRVGEEVYAAFK-HWDL---GDIIAA 125

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N   G++ +  Q++ +LS +   PLP        + ++++ R++DL      +
Sbjct: 126 RGVLFRTN--KGELSVQVQELRLLSKSLR-PLPDKFHGLADQEMKYRQRYVDLIVSPETR 182

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  + RT+ I S+R  M    F+E  TP+L        A+ F+          + L  AP
Sbjct: 183 NTFRARTKAIASLRRHMGDAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMF-LRIAP 241

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R ++I   FR+E   S R   EF  ++   ++ +   +++  EN++R
Sbjct: 242 ELYLKRLIVGGFERVYEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDYTENLIR 300

Query: 259 GVFEEFSNGNTV----------SNNFLRICYDDAIRRYGTDKPD 292
               + + G+ V          S  F R+    AI++Y     D
Sbjct: 301 QAAID-ATGSAVLNYQGRELDLSKPFHRLTIAQAIQKYAPQYTD 343



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E   + F      K+  +     +   Y RA + GMPP 
Sbjct: 418 RFELFITGREIANGFSELNDPEDQAERFRKQVEQKDAGDEEAMYYDADYIRALEYGMPPT 477

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + N+R+V LFP
Sbjct: 478 GGCGIGIDRLVMLLTDSPNIRDVILFP 504


>gi|194434376|ref|ZP_03066639.1| asparagine tRNA synthetase [Shigella dysenteriae 1012]
 gi|194417360|gb|EDX33466.1| asparagine tRNA synthetase [Shigella dysenteriae 1012]
 gi|332095876|gb|EGJ00883.1| asparaginyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 466

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 54/280 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 63

Query: 76  LVMSRSAETINANIITG----------QIELSAQKIEILSVAEEL-PLPVFGEREYPESI 124
            V+  +  T  + I+TG          Q E+ A K+E+    E+    P+  +R    SI
Sbjct: 64  DVLRLT--TGCSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRH---SI 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +   
Sbjct: 119 EYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF- 177

Query: 183 PSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRD 222
             RV+      LP+  Q                    Q      A    + +   P FR 
Sbjct: 178 --RVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRA 235

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E+  + R   EF+ L+ E++F   +DI    E +L+ VF+
Sbjct: 236 ENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFK 275


>gi|325955446|ref|YP_004239106.1| Lysyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323438064|gb|ADX68528.1| Lysyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 564

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 24/254 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+L+G +   R  G   F +++D  G  Q+  + D    E   +   + +L I   +
Sbjct: 46  GKVVKLAGRLMSTRIMGKASFAELQDSEGRIQIYISRDDLPNESDYNTVFKKLLDIGDFI 105

Query: 78  MSRSAETINANIITGQI-ELSAQKIEILSVAEEL-PLP---------VFGEREYPESIRF 126
                  I   +   ++ E+S    ++  +A+ L PLP         VF     PE +R+
Sbjct: 106 ------GIEGYLFKTKVGEISVHVTQLTVLAKTLRPLPIVKTDDDGHVFDAFVDPE-LRY 158

Query: 127 KYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVP 183
           + R++DL  +   K I  KRT++  +MR    A  ++E  TPIL  S P G  AR F+  
Sbjct: 159 RMRYVDLVVNPHVKTIFQKRTKLFQAMRDFFNARGYLEVETPIL-QSIPGGAAARPFITH 217

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++
Sbjct: 218 HNALDIPLY-LRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAY 275

Query: 244 VEQDDILNTMENVL 257
            + + +++  E +L
Sbjct: 276 KDYNWMMDFTEQLL 289



 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L    +++EV  FP
Sbjct: 452 RALEYGMPPTAGLGIGMDRLLMYLTNNPSIQEVLFFP 488


>gi|323303244|gb|EGA57042.1| Msk1p [Saccharomyces cerevisiae FostersB]
          Length = 517

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
           + L   K+ I+    +LPLP    R   E+     R +D + +     +V R RII  +R
Sbjct: 124 LSLICNKLPIVLSVSQLPLP---SRLNDETKIKSNRVVDYQLNGTQTLLV-RARIIKLLR 179

Query: 154 CRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
             +   NF+E  TPIL++ S    A+ F+  S+        L  AP+ + + L+ SG  +
Sbjct: 180 KFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDHLELRIAPELWLKRLIISGLQK 237

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            ++I   FR+E   S     EF  L+   +++  DDI+   E++ +
Sbjct: 238 VYEIGKVFRNEGIDSXH-NAEFSTLEFYETYMSMDDIVARTEDLFK 282


>gi|320202327|gb|EFW76898.1| Asparaginyl-tRNA synthetase [Escherichia coli EC4100B]
          Length = 466

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 54/280 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 63

Query: 76  LVMSRSAETINANIITG----------QIELSAQKIEILSVAEEL-PLPVFGEREYPESI 124
            V+  +  T  + I+TG          Q E+ A K+E+    E+    P+  +R    SI
Sbjct: 64  DVLRLT--TGCSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRH---SI 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +   
Sbjct: 119 EYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF- 177

Query: 183 PSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRD 222
             RV+      LP+  Q                    Q      A    + +   P FR 
Sbjct: 178 --RVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRA 235

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E+  + R   EF+ L+ E++F   +DI    E +L+ VF+
Sbjct: 236 ENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFK 275


>gi|157961855|ref|YP_001501889.1| asparaginyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189083480|sp|A8H467|SYN_SHEPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|157846855|gb|ABV87354.1| asparaginyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 466

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 132/351 (37%), Gaps = 75/351 (21%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           +GS + + GWV   R    GI FL + D             +CF+  + V         +
Sbjct: 16  IGSQITVRGWVRSRRDSKAGISFLAVYD------------GSCFDPIQGVVPNNLENYTN 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + E + +       E+   K+E+  + E+    P+  +R   E +R 
Sbjct: 64  EVLKLTAGCSVVMTGEVVESPGQGQAFEMQVTKVEVAGLVEDPDTYPMAAKRHSIEHLR- 122

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +I  STP++TAS  EGA +     
Sbjct: 123 --ELAHLRPRTNIIGAVARVRNCLSQAIHRFYNEQGYIWVSTPLITASDTEGAGEMF--- 177

Query: 185 RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDED 224
           RV+      LP+  +                    Q      A    + +   P FR E+
Sbjct: 178 RVSTLDLENLPRTDKGTVDYAEDFFGKESFLTVSGQLNAETYACALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL----RGVFEEFSNG------------- 267
             + R   EF+ ++ E++F   DD     E++L    + V EE  +              
Sbjct: 238 SNTSRHLAEFWMVEPEVAFANLDDAAKLAEDMLKYCFKAVLEERRDDLEFFAQRVEKTAI 297

Query: 268 ----NTVSNNFLRICYDDAIR-RYGTDKP---DLRNPIIMHNVTEHFVHSE 310
               N V+++F +I Y DAI      DK    D+   I +H+  E ++  E
Sbjct: 298 ERLENFVTSDFAQIDYTDAIEILKACDKDFEYDVEWGIDLHSEHERYLAEE 348


>gi|60683235|ref|YP_213379.1| asparaginyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|81313713|sp|Q5L8W2|SYN_BACFN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|60494669|emb|CAH09470.1| asparaginyl-trna synthetase [Bacteroides fragilis NCTC 9343]
          Length = 467

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 112/276 (40%), Gaps = 34/276 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     +   D G+ V + GWV   R    + F+ + D   I  V    D A F  E+ 
Sbjct: 6   RTKIVDLMKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQVVVDLANFDEEML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121
           K + +   L ++G++     E++ A     + E+ A++IE+L   +   PL   G     
Sbjct: 66  KQITTGACLSVNGVL----TESVGAG---QKAEVQAREIEVLGTCDNTYPLQKKGH---- 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARD 179
            S+ F      LR  T     V R R  +  ++      + F    TPI+TAS  EGA  
Sbjct: 115 -SMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQ 173

Query: 180 FLVPSRVN--------QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRD 222
               + +N         GS      F+    +     QL   L A+     +   P FR 
Sbjct: 174 MFQVTTMNLYDLKKDANGSIVYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRA 233

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           E+  + R   EF+ ++ E++F E  + ++  E  ++
Sbjct: 234 ENSNTPRHLAEFWMIEPEVAFNEIQENMDLAEEFIK 269


>gi|16128897|ref|NP_415450.1| asparaginyl tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|26246957|ref|NP_752997.1| asparaginyl-tRNA synthetase [Escherichia coli CFT073]
 gi|30062465|ref|NP_836636.1| asparaginyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56479774|ref|NP_706849.2| asparaginyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|74311488|ref|YP_309907.1| asparaginyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|82544672|ref|YP_408619.1| asparaginyl-tRNA synthetase [Shigella boydii Sb227]
 gi|89107780|ref|AP_001560.1| asparaginyl tRNA synthetase [Escherichia coli str. K-12 substr.
           W3110]
 gi|91210032|ref|YP_540018.1| asparaginyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110641127|ref|YP_668857.1| asparaginyl-tRNA synthetase [Escherichia coli 536]
 gi|110804939|ref|YP_688459.1| asparaginyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|157157150|ref|YP_001462150.1| asparaginyl-tRNA synthetase [Escherichia coli E24377A]
 gi|157160452|ref|YP_001457770.1| asparaginyl-tRNA synthetase [Escherichia coli HS]
 gi|162317582|ref|YP_852061.2| asparaginyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|170020668|ref|YP_001725622.1| asparaginyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|170080588|ref|YP_001729908.1| asparaginyl tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170682866|ref|YP_001744240.1| asparaginyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187733912|ref|YP_001880869.1| asparaginyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|188493504|ref|ZP_03000774.1| asparaginyl-tRNA synthetase [Escherichia coli 53638]
 gi|191166973|ref|ZP_03028796.1| asparagine tRNA synthetase [Escherichia coli B7A]
 gi|191172150|ref|ZP_03033694.1| asparagine tRNA synthetase [Escherichia coli F11]
 gi|193064676|ref|ZP_03045755.1| asparagine tRNA synthetase [Escherichia coli E22]
 gi|193071677|ref|ZP_03052579.1| asparagine tRNA synthetase [Escherichia coli E110019]
 gi|194428351|ref|ZP_03060892.1| asparagine tRNA synthetase [Escherichia coli B171]
 gi|194438714|ref|ZP_03070801.1| asparagine tRNA synthetase [Escherichia coli 101-1]
 gi|209918181|ref|YP_002292265.1| asparaginyl-tRNA synthetase [Escherichia coli SE11]
 gi|215486055|ref|YP_002328486.1| asparaginyl-tRNA synthetase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218553517|ref|YP_002386430.1| asparaginyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218557835|ref|YP_002390748.1| asparaginyl-tRNA synthetase [Escherichia coli S88]
 gi|218688773|ref|YP_002396985.1| asparaginyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218694405|ref|YP_002402072.1| asparaginyl-tRNA synthetase [Escherichia coli 55989]
 gi|218700551|ref|YP_002408180.1| asparaginyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218704358|ref|YP_002411877.1| asparaginyl-tRNA synthetase [Escherichia coli UMN026]
 gi|227884104|ref|ZP_04001909.1| asparagine--tRNA ligase [Escherichia coli 83972]
 gi|238900188|ref|YP_002925984.1| asparaginyl tRNA synthetase [Escherichia coli BW2952]
 gi|253774041|ref|YP_003036872.1| asparaginyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254161044|ref|YP_003044152.1| asparaginyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256018811|ref|ZP_05432676.1| asparaginyl-tRNA synthetase [Shigella sp. D9]
 gi|256023368|ref|ZP_05437233.1| asparaginyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|260843180|ref|YP_003220958.1| asparaginyl tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260854222|ref|YP_003228113.1| asparaginyl tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260867102|ref|YP_003233504.1| asparaginyl tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|293404233|ref|ZP_06648227.1| asparaginyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293409308|ref|ZP_06652884.1| asparaginyl-tRNA synthetase [Escherichia coli B354]
 gi|293414210|ref|ZP_06656859.1| asparaginyl-tRNA synthetase [Escherichia coli B185]
 gi|293433227|ref|ZP_06661655.1| asparaginyl-tRNA synthetase [Escherichia coli B088]
 gi|297519701|ref|ZP_06938087.1| asparaginyl-tRNA synthetase [Escherichia coli OP50]
 gi|298380016|ref|ZP_06989621.1| asparaginyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300824183|ref|ZP_07104302.1| asparaginyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300901637|ref|ZP_07119698.1| asparaginyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300902908|ref|ZP_07120853.1| asparaginyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300921031|ref|ZP_07137418.1| asparaginyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300925389|ref|ZP_07141275.1| asparaginyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300929628|ref|ZP_07145089.1| asparaginyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300937723|ref|ZP_07152525.1| asparaginyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300949703|ref|ZP_07163683.1| asparaginyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300955418|ref|ZP_07167794.1| asparaginyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300978402|ref|ZP_07174253.1| asparaginyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300983044|ref|ZP_07176420.1| asparaginyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|301022440|ref|ZP_07186321.1| asparaginyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301023054|ref|ZP_07186863.1| asparaginyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|301047806|ref|ZP_07194859.1| asparaginyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|301302455|ref|ZP_07208586.1| asparaginyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301326646|ref|ZP_07219976.1| asparaginyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|301643452|ref|ZP_07243500.1| asparaginyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|306812616|ref|ZP_07446809.1| asparaginyl-tRNA synthetase [Escherichia coli NC101]
 gi|307137560|ref|ZP_07496916.1| asparaginyl-tRNA synthetase [Escherichia coli H736]
 gi|307311683|ref|ZP_07591323.1| asparaginyl-tRNA synthetase [Escherichia coli W]
 gi|309795082|ref|ZP_07689502.1| asparaginyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|312969004|ref|ZP_07783211.1| asparaginyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312971060|ref|ZP_07785239.1| asparaginyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|331657002|ref|ZP_08357964.1| asparagine--tRNA ligase [Escherichia coli TA206]
 gi|331662346|ref|ZP_08363269.1| asparagine--tRNA ligase [Escherichia coli TA143]
 gi|331667311|ref|ZP_08368176.1| asparagine--tRNA ligase [Escherichia coli TA271]
 gi|67473033|sp|P0A8M0|SYN_ECOLI RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|67473034|sp|P0A8M1|SYN_ECOL6 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|67473035|sp|P0A8M2|SYN_SHIFL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123048314|sp|Q0T6B1|SYN_SHIF8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123049323|sp|Q0TJC3|SYN_ECOL5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123084494|sp|Q1RDS7|SYN_ECOUT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123732380|sp|Q3Z3J0|SYN_SHISS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123741970|sp|Q31YR7|SYN_SHIBS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166980085|sp|A7ZK21|SYN_ECO24 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166980086|sp|A7ZYN3|SYN_ECOHS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|189083271|sp|B1IW01|SYN_ECOLC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|26107357|gb|AAN79540.1|AE016758_144 Asparaginyl-tRNA synthetase [Escherichia coli CFT073]
 gi|41000|emb|CAA48274.1| Asparaginyl-tRNA synthetase [Escherichia coli K-12]
 gi|147935|gb|AAA24666.1| asparaginyl-tRNA synthetase (asnS) [Escherichia coli]
 gi|1651455|dbj|BAA35682.1| asparaginyl tRNA synthetase [Escherichia coli str. K12 substr.
           W3110]
 gi|1787161|gb|AAC74016.1| asparaginyl tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|30040711|gb|AAP16442.1| asparagine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56383325|gb|AAN42556.2| asparagine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|73854965|gb|AAZ87672.1| asparagine tRNA synthetase [Shigella sonnei Ss046]
 gi|81246083|gb|ABB66791.1| asparagine tRNA synthetase [Shigella boydii Sb227]
 gi|91071606|gb|ABE06487.1| asparagine tRNA synthetase [Escherichia coli UTI89]
 gi|110342719|gb|ABG68956.1| asparaginyl-tRNA synthetase [Escherichia coli 536]
 gi|110614487|gb|ABF03154.1| asparagine tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|157066132|gb|ABV05387.1| asparagine tRNA synthetase [Escherichia coli HS]
 gi|157079180|gb|ABV18888.1| asparaginyl-tRNA synthetase [Escherichia coli E24377A]
 gi|169755596|gb|ACA78295.1| asparaginyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|169888423|gb|ACB02130.1| asparaginyl tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170520584|gb|ACB18762.1| asparagine tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187430904|gb|ACD10178.1| asparaginyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|188488703|gb|EDU63806.1| asparaginyl-tRNA synthetase [Escherichia coli 53638]
 gi|190902967|gb|EDV62693.1| asparagine tRNA synthetase [Escherichia coli B7A]
 gi|190907677|gb|EDV67272.1| asparagine tRNA synthetase [Escherichia coli F11]
 gi|192927733|gb|EDV82348.1| asparagine tRNA synthetase [Escherichia coli E22]
 gi|192955001|gb|EDV85502.1| asparagine tRNA synthetase [Escherichia coli E110019]
 gi|194413566|gb|EDX29847.1| asparagine tRNA synthetase [Escherichia coli B171]
 gi|194422346|gb|EDX38346.1| asparagine tRNA synthetase [Escherichia coli 101-1]
 gi|209911440|dbj|BAG76514.1| asparaginyl-tRNA synthase [Escherichia coli SE11]
 gi|215264127|emb|CAS08471.1| asparaginyl tRNA synthetase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218351137|emb|CAU96841.1| asparaginyl tRNA synthetase [Escherichia coli 55989]
 gi|218360285|emb|CAQ97835.1| asparaginyl tRNA synthetase [Escherichia coli IAI1]
 gi|218364604|emb|CAR02290.1| asparaginyl tRNA synthetase [Escherichia coli S88]
 gi|218370537|emb|CAR18344.1| asparaginyl tRNA synthetase [Escherichia coli IAI39]
 gi|218426337|emb|CAR07162.1| asparaginyl tRNA synthetase [Escherichia coli ED1a]
 gi|218431455|emb|CAR12333.1| asparaginyl tRNA synthetase [Escherichia coli UMN026]
 gi|222032661|emb|CAP75400.1| Asparaginyl-tRNA synthetase [Escherichia coli LF82]
 gi|227838856|gb|EEJ49322.1| asparagine--tRNA ligase [Escherichia coli 83972]
 gi|238860020|gb|ACR62018.1| asparaginyl tRNA synthetase [Escherichia coli BW2952]
 gi|242376745|emb|CAQ31458.1| asparaginyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253325085|gb|ACT29687.1| asparaginyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253972945|gb|ACT38616.1| asparaginyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253977159|gb|ACT42829.1| asparaginyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|257752871|dbj|BAI24373.1| asparaginyl tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257758327|dbj|BAI29824.1| asparaginyl tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257763458|dbj|BAI34953.1| asparaginyl tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|260449924|gb|ACX40346.1| asparaginyl-tRNA synthetase [Escherichia coli DH1]
 gi|281600290|gb|ADA73274.1| Asparaginyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|284920781|emb|CBG33844.1| asparaginyl-tRNA synthetase [Escherichia coli 042]
 gi|291324046|gb|EFE63468.1| asparaginyl-tRNA synthetase [Escherichia coli B088]
 gi|291428819|gb|EFF01844.1| asparaginyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291434268|gb|EFF07241.1| asparaginyl-tRNA synthetase [Escherichia coli B185]
 gi|291469776|gb|EFF12260.1| asparaginyl-tRNA synthetase [Escherichia coli B354]
 gi|294489526|gb|ADE88282.1| asparaginyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|298279714|gb|EFI21222.1| asparaginyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|299881239|gb|EFI89450.1| asparaginyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300300338|gb|EFJ56723.1| asparaginyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300307008|gb|EFJ61528.1| asparaginyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300317707|gb|EFJ67491.1| asparaginyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300354968|gb|EFJ70838.1| asparaginyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300397260|gb|EFJ80798.1| asparaginyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300405050|gb|EFJ88588.1| asparaginyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300409690|gb|EFJ93228.1| asparaginyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300412022|gb|EFJ95332.1| asparaginyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300418518|gb|EFK01829.1| asparaginyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300450907|gb|EFK14527.1| asparaginyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300457284|gb|EFK20777.1| asparaginyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300462405|gb|EFK25898.1| asparaginyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300523359|gb|EFK44428.1| asparaginyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300842294|gb|EFK70054.1| asparaginyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300846691|gb|EFK74451.1| asparaginyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|301078166|gb|EFK92972.1| asparaginyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|305853379|gb|EFM53818.1| asparaginyl-tRNA synthetase [Escherichia coli NC101]
 gi|306908238|gb|EFN38737.1| asparaginyl-tRNA synthetase [Escherichia coli W]
 gi|307552769|gb|ADN45544.1| asparaginyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|307627642|gb|ADN71946.1| asparaginyl-tRNA synthetase [Escherichia coli UM146]
 gi|308121386|gb|EFO58648.1| asparaginyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|309701206|emb|CBJ00506.1| asparaginyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310336821|gb|EFQ01988.1| asparaginyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|312286406|gb|EFR14319.1| asparaginyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312945450|gb|ADR26277.1| asparaginyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|313650828|gb|EFS15229.1| asparaginyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|315060215|gb|ADT74542.1| asparaginyl tRNA synthetase [Escherichia coli W]
 gi|315135578|dbj|BAJ42737.1| asparaginyl-tRNA synthetase [Escherichia coli DH1]
 gi|315257974|gb|EFU37942.1| asparaginyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|315287563|gb|EFU46969.1| asparaginyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315291191|gb|EFU50551.1| asparaginyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315296233|gb|EFU55540.1| asparaginyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|315619125|gb|EFU99705.1| asparaginyl-tRNA synthetase [Escherichia coli 3431]
 gi|320177121|gb|EFW52136.1| Asparaginyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320183830|gb|EFW58663.1| Asparaginyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320196575|gb|EFW71198.1| Asparaginyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|323157179|gb|EFZ43302.1| asparaginyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323159559|gb|EFZ45539.1| asparaginyl-tRNA synthetase [Escherichia coli E128010]
 gi|323165404|gb|EFZ51191.1| asparaginyl-tRNA synthetase [Shigella sonnei 53G]
 gi|323174969|gb|EFZ60584.1| asparaginyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323175446|gb|EFZ61041.1| asparaginyl-tRNA synthetase [Escherichia coli 1180]
 gi|323185363|gb|EFZ70727.1| asparaginyl-tRNA synthetase [Escherichia coli 1357]
 gi|323190750|gb|EFZ76019.1| asparaginyl-tRNA synthetase [Escherichia coli RN587/1]
 gi|323379225|gb|ADX51493.1| asparaginyl-tRNA synthetase [Escherichia coli KO11]
 gi|323938036|gb|EGB34298.1| asparaginyl-tRNA synthetase [Escherichia coli E1520]
 gi|323942846|gb|EGB39011.1| asparaginyl-tRNA synthetase [Escherichia coli E482]
 gi|323947281|gb|EGB43289.1| asparaginyl-tRNA synthetase [Escherichia coli H120]
 gi|323953361|gb|EGB49227.1| asparaginyl-tRNA synthetase [Escherichia coli H252]
 gi|323958236|gb|EGB53945.1| asparaginyl-tRNA synthetase [Escherichia coli H263]
 gi|323962922|gb|EGB58496.1| asparaginyl-tRNA synthetase [Escherichia coli H489]
 gi|323967177|gb|EGB62601.1| asparaginyl-tRNA synthetase [Escherichia coli M863]
 gi|323973195|gb|EGB68387.1| asparaginyl-tRNA synthetase [Escherichia coli TA007]
 gi|324009869|gb|EGB79088.1| asparaginyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|324012919|gb|EGB82138.1| asparaginyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|324019059|gb|EGB88278.1| asparaginyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|324117205|gb|EGC11113.1| asparaginyl-tRNA synthetase [Escherichia coli E1167]
 gi|327253720|gb|EGE65349.1| asparaginyl-tRNA synthetase [Escherichia coli STEC_7v]
 gi|331055250|gb|EGI27259.1| asparagine--tRNA ligase [Escherichia coli TA206]
 gi|331060768|gb|EGI32732.1| asparagine--tRNA ligase [Escherichia coli TA143]
 gi|331065667|gb|EGI37560.1| asparagine--tRNA ligase [Escherichia coli TA271]
 gi|332342373|gb|AEE55707.1| asparaginyl-tRNA synthetase AsnS [Escherichia coli UMNK88]
 gi|332759018|gb|EGJ89328.1| asparaginyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|332760113|gb|EGJ90411.1| asparaginyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332762702|gb|EGJ92965.1| asparaginyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332767717|gb|EGJ97908.1| asparaginyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333001235|gb|EGK20803.1| asparaginyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333006157|gb|EGK25666.1| asparaginyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333008916|gb|EGK28376.1| asparaginyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333020053|gb|EGK39324.1| asparaginyl-tRNA synthetase [Shigella flexneri K-304]
 gi|333020226|gb|EGK39496.1| asparaginyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 466

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 54/280 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 63

Query: 76  LVMSRSAETINANIITG----------QIELSAQKIEILSVAEEL-PLPVFGEREYPESI 124
            V+  +  T  + I+TG          Q E+ A K+E+    E+    P+  +R    SI
Sbjct: 64  DVLRLT--TGCSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRH---SI 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +   
Sbjct: 119 EYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF- 177

Query: 183 PSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRD 222
             RV+      LP+  Q                    Q      A    + +   P FR 
Sbjct: 178 --RVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRA 235

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E+  + R   EF+ L+ E++F   +DI    E +L+ VF+
Sbjct: 236 ENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFK 275



 Score = 37.0 bits (84), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+ +    +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|323346903|gb|EGA81182.1| Msk1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323352574|gb|EGA85073.1| Msk1p [Saccharomyces cerevisiae VL3]
          Length = 537

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
           + L   K+ I+    +LPLP    R   E+     R +D + +     +V R RII  +R
Sbjct: 144 LSLICNKLPIVLSVSQLPLP---SRLNDETKIKSNRVVDYQLNGTQTLLV-RARIIKLLR 199

Query: 154 CRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
             +   NF+E  TPIL++ S    A+ F+  S+        L  AP+ + + L+ SG  +
Sbjct: 200 KFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDHLELRIAPELWLKRLIISGLQK 257

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            ++I   FR+E   S     EF  L+   +++  DDI+   E++ +
Sbjct: 258 VYEIGKVFRNEGIDSTH-NAEFSTLEFYETYMSMDDIVXRTEDLFK 302


>gi|237707081|ref|ZP_04537562.1| AsnS [Escherichia sp. 3_2_53FAA]
 gi|331641457|ref|ZP_08342592.1| asparagine--tRNA ligase [Escherichia coli H736]
 gi|331672464|ref|ZP_08373254.1| asparagine--tRNA ligase [Escherichia coli TA280]
 gi|331676719|ref|ZP_08377415.1| asparagine--tRNA ligase [Escherichia coli H591]
 gi|332279891|ref|ZP_08392304.1| asparaginyl-tRNA synthetase [Shigella sp. D9]
 gi|115512272|gb|ABJ00347.1| AsnS [Escherichia coli APEC O1]
 gi|226898291|gb|EEH84550.1| AsnS [Escherichia sp. 3_2_53FAA]
 gi|331038255|gb|EGI10475.1| asparagine--tRNA ligase [Escherichia coli H736]
 gi|331070370|gb|EGI41735.1| asparagine--tRNA ligase [Escherichia coli TA280]
 gi|331075408|gb|EGI46706.1| asparagine--tRNA ligase [Escherichia coli H591]
 gi|332102243|gb|EGJ05589.1| asparaginyl-tRNA synthetase [Shigella sp. D9]
          Length = 481

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 54/280 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 31  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 78

Query: 76  LVMSRSAETINANIITG----------QIELSAQKIEILSVAEEL-PLPVFGEREYPESI 124
            V+  +  T  + I+TG          Q E+ A K+E+    E+    P+  +R    SI
Sbjct: 79  DVLRLT--TGCSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRH---SI 133

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +   
Sbjct: 134 EYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF- 192

Query: 183 PSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRD 222
             RV+      LP+  Q                    Q      A    + +   P FR 
Sbjct: 193 --RVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRA 250

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E+  + R   EF+ L+ E++F   +DI    E +L+ VF+
Sbjct: 251 ENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFK 290


>gi|238795874|ref|ZP_04639387.1| Asparaginyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238720337|gb|EEQ12140.1| Asparaginyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 466

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 123/320 (38%), Gaps = 63/320 (19%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV------- 65
           G + V S V + GWV R R          RD       VA  D +CF+  ++V       
Sbjct: 12  GRAAVDSEVTVRGWV-RTR----------RDSKAGISFVAVYDGSCFDPLQAVVNNTLPN 60

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILS-VAEELPLPVFGEREYPES 123
             + VL +          T+ A+   GQ  E+ A  I+++  V +    P+  +R    S
Sbjct: 61  YQDEVLHLTTGCSVEVTGTVVASPGEGQSFEIQATAIKVVGWVDDPDTYPMAAKRH---S 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181
           I +      LR  T     V R R  +     R   EN +   STP++TAS  EGA +  
Sbjct: 118 IEYLREVAHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMF 177

Query: 182 VPS--------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             S        R + G+      F+   A      Q      AS   + +   P FR E+
Sbjct: 178 RVSTLDLENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYASALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT--------------- 269
             + R   EF+ ++ E++F   DD+    E +L+ VF+   N                  
Sbjct: 238 SNTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERVDKDAL 297

Query: 270 ------VSNNFLRICYDDAI 283
                 V+++F ++ Y DAI
Sbjct: 298 DRLQRFVTSDFAQVNYTDAI 317


>gi|330833993|ref|YP_004408721.1| lysyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566132|gb|AEB94237.1| lysyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 493

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 121/278 (43%), Gaps = 27/278 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V+ +G V  +R HG   F+DI D     Q+    +    E  K  +      ID G ++ 
Sbjct: 54  VKTAGRVANLRRHGKASFIDIFDDGERLQLYLRVNELGTEYEKFFK-----VIDRGDIIG 108

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTL 138
              +        G++ L  +  ++L  A+ L  P    +  PE  R+ +R++D L  D  
Sbjct: 109 VEGDLFFT--AKGELTLLVRSFQLL--AKSLIEPPDWSQMSPE-FRYSHRYVDFLYNDKA 163

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYALPQA 197
              +  R +II  +R  +  + FIE  TPIL      GA      S VN     + L  +
Sbjct: 164 RSAMELRFKIIREIRSFLAEQGFIEVETPILQPVYG-GALAKPFKSHVNYLDEDWYLRIS 222

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM---- 253
            + Y +  +  GFD+ F+I   FR+ED      P EF  +++  ++ + +DI++      
Sbjct: 223 LELYLKRFIVGGFDKVFEIGKVFRNEDIDVTHNP-EFTLMELYWAYADYNDIMDLTRRLF 281

Query: 254 ----ENVLRGVFEEFSNG-NTVS---NNFLRICYDDAI 283
               E VL     ++  G NTV    +NF +I   D++
Sbjct: 282 SHLAEKVLSSTKLQYKVGENTVEIDLSNFRKISLYDSL 319



 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A   GMPP GG+  GIDR+VML    ++++EV  FPM
Sbjct: 449 ALSYGMPPTGGLGIGIDRVVMLFTNNQSIKEVIPFPM 485


>gi|171463252|ref|YP_001797365.1| lysyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238689052|sp|B1XTS4|SYK_POLNS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|171192790|gb|ACB43751.1| lysyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 514

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY------RAFQCGMP 534
           +++L   G EIA+G    + +E     F      KE  +     +Y      RA + GMP
Sbjct: 421 RFELFITGREIANGFSELNDAEDQANRFRKQVEQKEAGDEE--AMYFDHDFIRALEYGMP 478

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG   GIDR++MLL  A N+R+V LFP
Sbjct: 479 PTGGCGIGIDRLIMLLTDAPNIRDVILFP 507



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 120/278 (43%), Gaps = 22/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  I+D  G  Q   N + +  ++  + +  W +   G  +S 
Sbjct: 69  VKVAGRMVLKRVMGKTSFATIQDRSGQIQFYINDELSGADVHGAFK-HWDM---GDFIST 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N   G++ +    + +LS +   PLP           +++ R++DL  +   +
Sbjct: 125 EGNLFKTN--KGELSVECSNLRLLSKSLR-PLPDKFHGLSDLETKYRQRYVDLIVNPESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  K R+  I S+R  M+  +F+E  TP+L        A+ F+          + L  AP
Sbjct: 182 STFKARSNAIASLRRHMLDADFMEVETPMLHPIPGGAAAKPFITHHNALDMQMF-LRIAP 240

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E ++R
Sbjct: 241 ELYLKRLVVGGFERVFEINHNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDFTEGLIR 299

Query: 259 GVFEEFSNGNTV----------SNNFLRICYDDAIRRY 286
               + + G  V          S  F R+   +AI +Y
Sbjct: 300 AAAID-AQGTAVLTHQGRELDLSKPFQRLTITEAILKY 336


>gi|169622585|ref|XP_001804701.1| hypothetical protein SNOG_14517 [Phaeosphaeria nodorum SN15]
 gi|160704803|gb|EAT78057.2| hypothetical protein SNOG_14517 [Phaeosphaeria nodorum SN15]
          Length = 352

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 23/132 (17%)

Query: 156 MIAENFIECSTPILTASSPEGARDFLV-----PSR-----VNQGS-----FYALPQAPQQ 200
           M+ ++F++C  PI+T+S  EGA +        PS       NQ       F+  P+    
Sbjct: 2   MLRQDFVQCHPPIITSSDCEGAGEVFTVAPYAPSTSTSEPANQAKEHDDHFFGSPKYLTV 61

Query: 201 YKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD---ILNTME 254
             QL    +A   ++ + ++P FR E   + R   EFY L+ E++FV  DD   ++N +E
Sbjct: 62  SSQLHLEALAQSVNKVWTLSPTFRAEKSDTARHLSEFYMLEAELAFV--DDLQVVMNVVE 119

Query: 255 NVLRGVFEEFSN 266
           ++LR V  E  +
Sbjct: 120 DLLRAVATELQS 131



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 50/129 (38%), Gaps = 11/129 (8%)

Query: 452 IDFAHN--PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
            D+  N  PF M        +G    ++  F   LV    E+  G +R H    +L++  
Sbjct: 224 TDYPRNIKPFYMAPSADLQAEGQTPSTVACFDL-LVPELCELVGGSMREHRLPELLKSMQ 282

Query: 510 NVGI--------SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           + G+          EV            + G  PHGG   G DR++  L G  N+R+V  
Sbjct: 283 DHGLPTQGMGETESEVARGSLQWYVDLRRYGSVPHGGFGLGFDRLLCYLSGVSNIRDVVS 342

Query: 562 FPMSQNFCD 570
           FP     CD
Sbjct: 343 FPRWHKRCD 351


>gi|265767787|ref|ZP_06095319.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|263252459|gb|EEZ23987.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301164754|emb|CBW24313.1| asparaginyl-trna synthetase [Bacteroides fragilis 638R]
          Length = 467

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 112/276 (40%), Gaps = 34/276 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     +   D G+ V + GWV   R    + F+ + D   I  V    D A F  E+ 
Sbjct: 6   RTKIVDLMKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQVVVDLANFDEEML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121
           K + +   L ++G++     E++ A     + E+ A++IE+L   +   PL   G     
Sbjct: 66  KQITTGACLSVNGVL----TESVGAG---QKAEVQAREIEVLGTCDNTYPLQKKGH---- 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARD 179
            S+ F      LR  T     V R R  +  ++      + F    TPI+TAS  EGA  
Sbjct: 115 -SMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQ 173

Query: 180 FLVPSRVN--------QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRD 222
               + +N         GS      F+    +     QL   L A+     +   P FR 
Sbjct: 174 MFQVTTMNLYDLKKDENGSIVYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRA 233

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           E+  + R   EF+ ++ E++F E  + ++  E  ++
Sbjct: 234 ENSNTPRHLAEFWMIEPEVAFNEIQENMDLAEEFIK 269


>gi|256820313|ref|YP_003141592.1| lysyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581896|gb|ACU93031.1| lysyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 562

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 14/217 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +  +R  G   F  ++D  G  Q+  N D  C    K++ +E    +  L 
Sbjct: 45  GKQVVVAGRLMSLRVQGKASFATLQDSEGTMQLYFNRDEMCPTDDKTLYNEVFKKLLDLG 104

Query: 78  MSRSAETINANIITGQIELSAQKIEILS-VAEELPLP-------VFGEREYPESIRFKYR 129
               AE        G+  +  +   +LS V   LP+P       V      PE  R++ R
Sbjct: 105 DFIGAEGTLFITKMGEKTVLVKNFTLLSKVLRPLPMPKVDADGKVHDAFTDPEQ-RYRMR 163

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRV 186
           ++DL  +   K + +KRT++ N+MR       ++E  TPIL A  P G  AR F+     
Sbjct: 164 YVDLVVNPQVKEVFIKRTKLFNAMRQFFNDAGYLEVETPILQA-IPGGASARPFITHHNA 222

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
                Y +  A + Y + L+  GFD  ++ +  FR+E
Sbjct: 223 LDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNE 258



 Score = 43.9 bits (102), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VM L   ++++EV  FP
Sbjct: 454 RALEYGMPPTSGLGIGMDRLVMFLTNNESIQEVLFFP 490


>gi|56479345|ref|YP_160934.1| lysyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81356212|sp|Q5NY31|SYK_AZOSE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|56315388|emb|CAI10033.1| Lysyl-tRNA synthetase (class II) [Aromatoleum aromaticum EbN1]
          Length = 502

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 108/250 (43%), Gaps = 21/250 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR----SEWVLCIDGL 76
           V+++G +   R  G   F+ I+D  G  Q+    D+   ++    +     + V  +  L
Sbjct: 67  VKVAGRIMLKRVMGKASFMTIQDLSGQIQLYVTRDAVGEDVYADFKHWDIGDIVGAVGTL 126

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-R 134
             +R          TG++ +    I +L+ +   LP    G  +  +  +++ R LDL  
Sbjct: 127 FKTR----------TGELSVKCTDIRLLTKSLRPLPDKFHGLTDVEQ--KYRQRHLDLIM 174

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
            +      V R+R++ S+R  M++  F+E  TP++        A+ F           + 
Sbjct: 175 NEQTRFTFVARSRMVQSIRNYMVSHGFLEVETPMMHPIPGGAAAKPFTTHHNALDMELF- 233

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF++ F++   FR+E   S R   EF  ++   ++     ++N  
Sbjct: 234 LRIAPELYLKRLVVGGFEKVFEVNRNFRNEG-LSPRHNPEFTMMEFYEAYANYKSLMNFT 292

Query: 254 ENVLRGVFEE 263
           E +LR    E
Sbjct: 293 EGLLRQAARE 302



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 461 RALEYGLPPTGGCGIGIDRLVMLLTDSPSIRDVILFP 497


>gi|34540852|ref|NP_905331.1| asparaginyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|59798576|sp|Q7MVE5|SYN_PORGI RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|34397166|gb|AAQ66230.1| asparaginyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 469

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 107/274 (39%), Gaps = 29/274 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L    VG  + + GWV   R +  + F+ + D   I  +    D A F+ A+ 
Sbjct: 7   RTRIADALHGGLVGQEINIKGWVRTKRGNKAVNFIALNDGSTIHNMQIVADLASFDAAQM 66

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPES 123
            +     CI   V+    E+  A    GQ +E+ A  IEI   A+    P+   ++   +
Sbjct: 67  SQITTGACIG--VIGTLVESQGA----GQSVEVQASAIEIYGTADPATYPL---QKKGHT 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL 181
           + F      LR  T     + R R   ++       N  +     P++TAS  EGA    
Sbjct: 118 LEFLREIAHLRPRTNTFGAIYRIRHHMAIAIHTFFHNKGYYYFHAPLITASDCEGAGQMF 177

Query: 182 VPSRVNQGSFYALPQAPQQYK--------------QL---LMASGFDRYFQIAPCFRDED 224
             + +N  S     +    Y+              QL   + A      +   P FR E+
Sbjct: 178 QVTTLNPDSLPRTEEGQVDYRKDFFGRHTSLTVSGQLEGEMAAMALGGIYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             + R   EF+ ++ E++F+E +D ++  E  ++
Sbjct: 238 SNTPRHLAEFWMIEPEVAFLEIEDNMDLAEEFIK 271


>gi|125808696|ref|XP_001360836.1| GA19868 [Drosophila pseudoobscura pseudoobscura]
 gi|54636008|gb|EAL25411.1| GA19868 [Drosophila pseudoobscura pseudoobscura]
          Length = 460

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 130/324 (40%), Gaps = 58/324 (17%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  + + GW+  +R      FLDI D            S+ F++      E      G V
Sbjct: 24  GDSLGIRGWIKNIRRLKNNTFLDIDD---------GSSSSRFQVVVPRNPETQNLTPGSV 74

Query: 78  MSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGEREYPESIRFKYRFLDLR 134
           +S   E   A    G  EL A ++E L+   + +  P     ++  PE +R ++  L  R
Sbjct: 75  ISAVGEIQVAP--NGNFELHADRVESLAEGHLQDGYPF-TPKQKHAPEYVR-EHLHLRSR 130

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            D +   +  R +   ++   M   +F++ +TP++T +  EGA +     RV   S   L
Sbjct: 131 VDYVAAQMRIRHKAQKAIHDYMDELDFVQINTPLMTTNDCEGAGEVF---RVQPDSEELL 187

Query: 195 PQ-------APQQY---KQLL----------MASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            Q       A Q Y   K  L          M  G    + +AP FR E+ +S     EF
Sbjct: 188 KQMARPNVPAEQSYFDSKVFLSVSGQLHLEAMTYGLGNTYCLAPAFRAENSKSPLHLAEF 247

Query: 235 YQLDMEMSFVEQ--------DDILNTMEN-VLRGVFEEFS----NGNTVSN------NFL 275
           Y  + E++ +++        + +L ++ N VL    E+      N N  S+       + 
Sbjct: 248 YMFEAELAHLDELEKLAKFIEQMLKSITNRVLETSSEDLHFCQRNANASSDLPWLTVPWT 307

Query: 276 RICYDDAIRRYGTDKPDLRNPIIM 299
            + YDDA+     +K  L+ PI +
Sbjct: 308 IMSYDDALHVLQANKESLKTPISL 331


>gi|224372928|ref|YP_002607300.1| lysyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223590008|gb|ACM93744.1| lysyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 502

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 124/282 (43%), Gaps = 33/282 (11%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G V  +R  G   F  I D  GI QV  + +         +  ++ L    L +    
Sbjct: 60  VAGRVKFLRLMGKAAFFKIEDMTGILQVYMSKNE--------LGDKFNLLKKNLEVGDIV 111

Query: 83  ETINANIIT--GQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-----R 134
           E      +T  G++ + A  ++IL+ A   LP    G ++     R++ R+LD+      
Sbjct: 112 EVTGYPFVTKTGELSIHADDVKILTKAIHPLPEKFHGLQDV--ETRYRQRYLDMIMNKDV 169

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193
           RDT     + R++I++ +R   +   F+E  TP+L T      AR F+            
Sbjct: 170 RDTF----LLRSKIVSLVREFFLKHGFLEVETPMLHTVVGGANARPFMTHHNALDIDM-N 224

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ + + L+  GF+  F++   FR+E       P EF  ++   ++  ++D++   
Sbjct: 225 LRIAPELFLKRLIVGGFEAVFELNRNFRNEGIDHTHNP-EFTMIEFYWAYHTKEDLMKLT 283

Query: 254 ENVLRGVFEEFS------NGNTVS--NNFLRICYDDAIRRYG 287
           + +   +FE+ +       G+ V   +N+  I Y D++ + G
Sbjct: 284 KELFDYLFEKLNLPKKLQYGDMVIDFDNWTTITYRDSLIKIG 325



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  G   GIDR+VMLL  + ++++V LFP
Sbjct: 451 RALQYGMPPTAGEGIGIDRLVMLLTNSHSIKDVILFP 487


>gi|291287175|ref|YP_003503991.1| lysyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884335|gb|ADD68035.1| lysyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 489

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 114/247 (46%), Gaps = 25/247 (10%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQV------VANPDSACFEIAKSVRSEWVLCIDGL 76
           ++G +  +R  G   F+ I+D  G  QV      +++ D A F   K+     ++ I G 
Sbjct: 54  VAGRIMAMREFGKTAFMTIKDRTGSVQVYVKKGEISDEDHAIF---KTSDVGDIIGIKGF 110

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-R 134
           +             T ++ + A++ ++L+ A  +LP    G ++     R++ R++DL  
Sbjct: 111 LFKTK---------TDELTICAKQYKMLTKALRDLPEKWHGLKDV--ETRYRQRYVDLIV 159

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
            D + +   KR+ II  +R   I  +F+E  TP++        A+ F           + 
Sbjct: 160 NDEVKETFRKRSLIIQKVREFFIGRDFLEVETPMMHPIVGGATAKPFETHHNALDMPLF- 218

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F++   FR+E   +   P EF  ++   ++ +   +++ +
Sbjct: 219 LRIAPELYLKRLVIGGFERIFELNRNFRNEGLSTRHNP-EFTMVEWYNAYNDYHGLMDMI 277

Query: 254 ENVLRGV 260
           E ++ G+
Sbjct: 278 EEMICGI 284



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQA--FSNVGISKEVVENRFGGL----YRAFQCGMP 534
           +++L   GFE+A+G   N +++ M Q   F     +KE  +     +     RA + G+P
Sbjct: 395 RFELFMGGFELANGF--NELNDPMDQKERFEKQVAAKEAGDEEAQMMDTDYIRALEYGLP 452

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+V+L   ++++R+V LFP
Sbjct: 453 PTAGAGLGIDRLVILFTDSQSIRDVLLFP 481


>gi|89897981|ref|YP_515091.1| lysyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|123749549|sp|Q255U2|SYK_CHLFF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|89331353|dbj|BAE80946.1| lysyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 526

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 19/195 (9%)

Query: 125 RFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV 182
           R++ R+LDL   D + +  +KR+RII  +R  M A++FIE  TPIL        A  F+ 
Sbjct: 174 RYRKRWLDLICSDEVRQTFLKRSRIIKLIRQYMDAQDFIEVETPILQNIYGGAEATPFVT 233

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    +         K++L+  G  R ++I   FR+E       P EF  ++    
Sbjct: 234 TLNALHSDMFLRISLEIALKKILVG-GTPRVYEIGKVFRNEGIDRTHNP-EFTMIEAYAM 291

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTV---------------SNNFLRICYDDAIRRYG 287
            ++   ++  +EN++  +  E +NG+TV                  ++R+   D+I+ YG
Sbjct: 292 NIDYHSVMVYVENLIEYLVGELNNGSTVLTYSHLKQGPQTIDFKAPWIRMTMKDSIKTYG 351

Query: 288 TDKPDLRNPIIMHNV 302
               DL     + N+
Sbjct: 352 GVDVDLHGDHELRNI 366



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 17/33 (51%), Positives = 24/33 (72%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP GG   GIDR+VM+L  + ++R+V  FP+
Sbjct: 485 GMPPAGGFGIGIDRLVMILTDSASIRDVLYFPV 517


>gi|19074136|ref|NP_584742.1| LYSYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74621262|sp|Q8SS56|SYKC_ENCCU RecName: Full=Probable lysyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|19068778|emb|CAD25246.1| LYSYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 440

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 109/244 (44%), Gaps = 15/244 (6%)

Query: 30  VRPHGGIIFLDIRDHYGITQVVANPDSACFE-IAKSVRSEWVLCIDGLVMSRSAETINAN 88
           +R H    F  +  +    QVV +   A  E +AK +R   V+   G        T+ A+
Sbjct: 3   MRLHARFCFFVVTSNGESLQVVVDTKEAGREQMAKFLRRGDVVGFTG--NPGRTRTLEAS 60

Query: 89  IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTR 147
           +    I      I +      +P   FG ++ PE+I ++ R++DL  +   +N   KR +
Sbjct: 61  VFATDI------IVLTPCLRTIPTEHFGLKD-PETI-YRKRYMDLLINRESRNRFQKRAQ 112

Query: 148 IINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
           II  +R  + +  F+E  TP++        A+ F+      +   Y +  +P+ Y + L+
Sbjct: 113 IIGYIRSFLDSRGFLEVETPMMNLIPGGAAAKPFITHHNELKLDLY-MRVSPELYLKKLV 171

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
             G +R ++I   FR+E       P EF   +  M++ + +D++   E ++ G+ E    
Sbjct: 172 VGGLERVYEIGKQFRNEGIDLTHNP-EFTSCEFYMAYADYNDLMEMTEELISGMVENMFG 230

Query: 267 GNTV 270
            +T+
Sbjct: 231 TDTI 234



 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+VM L  A N+R+V  FP
Sbjct: 400 ALEYGLPPTGGWGIGIDRLVMYLTDAANIRDVIFFP 435


>gi|312886772|ref|ZP_07746379.1| lysyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311300874|gb|EFQ77936.1| lysyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 579

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 14/214 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +++D  G  Q+    D  C +  K++ +     +  L    
Sbjct: 55  VVIAGRIMSRRIMGSASFAELQDSTGRVQIYIKRDDICPDEDKTMYNTVFKKLLDLGDFV 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---------PESIRFKYRFL 131
             +       TG+  +  +++ ILS + + PLPV    E          PE +R++ R++
Sbjct: 115 GVKGYVFTTQTGETSVHVKELTILSKSLK-PLPVVRREEDGTVHDAFTDPE-MRYRQRYV 172

Query: 132 DLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQG 189
           DL  +   K I + R+++I++MR    +E ++E  TPIL +      AR F         
Sbjct: 173 DLTVNPEFKQIFMNRSKVISTMRSYFDSEGWMEVETPILQSVHGGAAARPFKTYHNTLDM 232

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             + L  A + Y + L+ +GFD  ++    FR+E
Sbjct: 233 PLF-LRIANELYLKRLIVAGFDGVYEFGKMFRNE 265



 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 9/60 (15%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           RA + GMPP  G+  GIDR+VML+     ++EV  FP  +         P +++V  +++
Sbjct: 461 RALEYGMPPTSGLGIGIDRLVMLMTNQTTIQEVLFFPQMR---------PESITVSNIKD 511


>gi|224536212|ref|ZP_03676751.1| hypothetical protein BACCELL_01079 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522155|gb|EEF91260.1| hypothetical protein BACCELL_01079 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 467

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 113/277 (40%), Gaps = 36/277 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F  E+ 
Sbjct: 6   RTKIVDVLKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQVVVDLANFDEEML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREY 120
           K + +   L ++G         +  ++ +GQ  E+ A++IE+L   +   PL   G    
Sbjct: 66  KDITTGACLSVNG--------ELTESVGSGQKAEIQAREIEVLGTCDNTYPLQKKGH--- 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGA- 177
             ++ F      LR  T     V R R  +  ++      + F+   TPI+TAS  EGA 
Sbjct: 115 --TLEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHTFFHQKGFVYFHTPIITASDCEGAG 172

Query: 178 RDFLVPSR-------------VNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221
           + F V ++             +    F+    +     QL   L A+     +   P FR
Sbjct: 173 QMFQVTTKNLYDLKKDEAGSIIYDDDFFGKQTSLTVSGQLEGELAATALGAIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            E+  + R   EF+ ++ E++F +  D ++  E  ++
Sbjct: 233 AENSNTPRHLAEFWMVEPEVAFNDITDNMDLAEEFIK 269


>gi|226320706|ref|ZP_03796264.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233922|gb|EEH32645.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 462

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 106/265 (40%), Gaps = 34/265 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF--EIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F  +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +T       R +I   +        F   +TPI+T++  EGA +     RV+   F 
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMF---RVSTLKFN 182

Query: 193 ALPQA-------------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            L  A                     Q      A    + +   P FR E+  + R   E
Sbjct: 183 KLNNALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASE 242

Query: 234 FYQLDMEMSFVEQDDILNTMENVLR 258
           F+ ++ EM+F + +D +   E++L+
Sbjct: 243 FWMIEPEMAFYKLNDNIALAEDLLK 267


>gi|15612661|ref|NP_240964.1| lysyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|11387139|sp|Q9KGG4|SYK_BACHD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|10172710|dbj|BAB03817.1| lysyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 501

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 118/262 (45%), Gaps = 29/262 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLV 77
           V L+G V   R  G   F  I+D  G  Q+    D+     +++  S+    ++ + G+ 
Sbjct: 61  VVLAGRVMTKRGKGKAGFAHIQDLTGQIQIYVRKDAVGDKSYDLFTSIDIGDIVGVKGVA 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--- 133
                         G++ +  Q  ++L+ +   LP    G ++  +  R++ R+LDL   
Sbjct: 121 FKTKV---------GELSVKVQDFQLLTKSLRPLPDKYHGLKDVEQ--RYRQRYLDLIVN 169

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQG 189
              RDT     V R++I+ SMR  +    ++E  TP +  S P G  AR F+        
Sbjct: 170 PEVRDTF----VLRSKILQSMRRYLDDRGYLEVETPTM-HSIPGGASARPFVTHHNALDM 224

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + +DI
Sbjct: 225 TLY-MRIAIELHLKRLIVGGMEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYNDI 282

Query: 250 LNTMENVLRGVFEEFSNGNTVS 271
           +   E ++  + ++     T++
Sbjct: 283 MELTELLIAHIAKDVLGTTTIT 304



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 SLEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFP 490


>gi|209527076|ref|ZP_03275591.1| nucleic acid binding OB-fold tRNA/helicase-type [Arthrospira maxima
           CS-328]
 gi|209492504|gb|EDZ92844.1| nucleic acid binding OB-fold tRNA/helicase-type [Arthrospira maxima
           CS-328]
          Length = 267

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 103/260 (39%), Gaps = 34/260 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCID 74
           G  V + GWV   R      F+++ D   +   QVV NPD   +  I + + +   + + 
Sbjct: 16  GEAVTVQGWVRTKRELKEFTFVEVNDGSCMANLQVVLNPDLTDYAAILRQLNTGASVEVT 75

Query: 75  GLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           G ++S  A+        GQ IEL A  +++   A+     +  +R    S  F      L
Sbjct: 76  GEIVSSPAK--------GQRIELKADTVQVYGEADPQTYVLQKKRH---SFEFLRTIAHL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVN---- 187
           R  T     V R R   +       +   F+   TPI+TAS  EGA +    + ++    
Sbjct: 125 RSRTNTYGAVFRVRNACAAAVHQFFQERGFLWIHTPIITASDCEGAGELFSVTSLDLNHL 184

Query: 188 ----------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q +  +MA  F   +   P FR E+  + R   EF
Sbjct: 185 PLTETKTVDFSQDFFGKRAFLTVSGQLEAEIMALAFGNVYTFGPTFRAENSNTSRHLAEF 244

Query: 235 YQLDMEMSFVEQDDILNTME 254
           + ++ EM+F + D  ++  E
Sbjct: 245 WMIEPEMAFCDLDGNMDLAE 264


>gi|195953371|ref|YP_002121661.1| lysyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932983|gb|ACG57683.1| lysyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 569

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 13/207 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           + ++G +  +R  G  IF  I+D  G  Q+    D    E  K V       ID G ++ 
Sbjct: 133 ISIAGRLVALRSMGKAIFGHIQDFTGKLQIYIKKDIVGDEKFKFVED----YIDVGDIIG 188

Query: 80  RSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
              +    +  TG++ +    IE+L+ A   +P    G ++    I+++ R+LDL   ++
Sbjct: 189 IKGKLFRTH--TGELTVEVFDIELLTKALNNMPEKWHGIKDI--EIKYRQRYLDLIANES 244

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
             K    R++II ++R       F+E  TPIL   +S   AR F+      +   Y L  
Sbjct: 245 SRKVFTLRSKIIKALRDFFDKNKFMEVETPILQPIASGATARPFVTYHNYLESELY-LRI 303

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDE 223
           AP+ Y + L+  G  R ++I   FR+E
Sbjct: 304 APELYLKKLIVGGIPRVYEIGKNFRNE 330



 Score = 43.9 bits (102), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 6/93 (6%)

Query: 481 QYDLVCNGFEIASG-----GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           +++L  N  EIA+         +     + Q        +E +E        A + GMPP
Sbjct: 477 RFELYINKKEIANAYSELNDPEDQAKRFLEQKLQKATGDEEAMETD-DDFVEALRYGMPP 535

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             G   GIDR+VML     ++R+V LFP ++  
Sbjct: 536 TAGEGIGIDRLVMLFANVDSIRDVILFPANRKL 568


>gi|189425785|ref|YP_001952962.1| asparaginyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189422044|gb|ACD96442.1| asparaginyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 463

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 104/274 (37%), Gaps = 29/274 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY---GITQVVANPDSACFEI 61
           RT     L   + G    ++GWV   R  G + F+ + D     GI  V+       F+ 
Sbjct: 4   RTLIADLLKRPEAGGTHTVAGWVRSTRASGDVAFIVLNDGSNLSGIQLVLERATVPDFDN 63

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                +       G  +  + E + +     Q EL    + ++  A+    P+  +R   
Sbjct: 64  LSKTGT-------GTALQATGELVTSPAAGQQFELRVTALTVVGNADP-DYPLQKKRHSF 115

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R     L  R +T       R+++  ++       NF+   TPI+TAS  EGA +  
Sbjct: 116 EYLR-SIAHLRPRSNTFGAVFRLRSKLAQAIHQFFSERNFLYVHTPIITASDCEGAGELF 174

Query: 182 VPSRV-------NQGS-------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDED 224
             + +       N+G        F+          QL   L A  F   +   P FR E+
Sbjct: 175 RVTTLPPNGAPRNEGGSIDFGQDFFGQKTGLTVSGQLEGELFAQAFGNIYTFGPTFRAEN 234

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             + R   EF+ ++ EM+F +  D  +  E  +R
Sbjct: 235 SNTARHASEFWMIEPEMAFSDLADDADLAEEFVR 268



 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 13/100 (13%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
           + ND  ++ A    LV    EI  G  R    +++ Q    + I KE     +++R    
Sbjct: 367 QNNDGRTVAAMDL-LVPKVGEIIGGSQREERLDLLEQRIDELEIPKEPLWWYLDSR---- 421

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
               + G  PH G   G +R++M L G +N+R+V  FP +
Sbjct: 422 ----RWGSTPHAGFGLGFERLIMYLSGMENIRDVIPFPRT 457


>gi|295111294|emb|CBL28044.1| Lysyl-tRNA synthetase (class II) [Synergistetes bacterium SGP1]
          Length = 511

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 119/284 (41%), Gaps = 20/284 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           SD    +  +G +  +R  G   F D+ D  G  Q+    + A  E       +WV   D
Sbjct: 68  SDETVTLSTAGRLMTLRRQGRTTFADLADETGRIQLYFQVN-ALGEKPYEFLKKWVDTGD 126

Query: 75  GL-VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            L V+     T       G++ +     ++LS +   PLP           R++ R++DL
Sbjct: 127 WLGVVGHPCRTKR-----GELTIQVTDYKLLSKSIR-PLPEKWHGLTDTETRYRRRYMDL 180

Query: 134 RRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   + +  KR++II+S R  + A   +E  TPIL+  +    AR F           
Sbjct: 181 IANPEVREVFRKRSKIISSFRETLEAHGSLEVETPILSVLAGGANARPFKTFHNALGLDM 240

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + Y + L+     R ++I   FR+E   +   P EF  +++   +   +D++N
Sbjct: 241 Y-LRIAVELYLKRLVVGMMGRVYEIGRNFRNEGIDTMHNP-EFTMMEVYWPYANYEDMMN 298

Query: 252 TMENVLR------GVFEEFSNG--NTVSNNFLRICYDDAIRRYG 287
             E ++R      G  E   NG    +S  F RI   DA++ Y 
Sbjct: 299 LAEELIRNAAKAIGTLEIEWNGVKADLSRPFRRITMLDAVKEYA 342



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR+VM L GA+++R+V LFP
Sbjct: 470 AIEVGLPPTGGMGIGMDRLVMFLTGARSIRDVILFP 505


>gi|226304130|ref|YP_002764088.1| lysyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|229494517|ref|ZP_04388280.1| lysyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|226183245|dbj|BAH31349.1| lysyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|229318879|gb|EEN84737.1| lysyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 503

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 5/155 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLPV   +E  E  R + R+ DL  R     N  KR  ++ ++R  + +  F+E  TP+L
Sbjct: 149 PLPV-AHKEMSEESRVRQRYADLIVRPEARDNARKRVAVVRALRNALESRGFLEVETPML 207

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T      AR F+  S       Y L  AP+ + +  +  G ++ F+I   FR+E   S 
Sbjct: 208 QTLHGGAAARPFVTHSNALDIDLY-LRIAPELFLKRCVVGGIEKVFEINRNFRNEGVDST 266

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
             P EF  L+   ++   DD    +  +++ V +E
Sbjct: 267 HSP-EFAMLETYEAYGTYDDSAKMIRELVQEVAQE 300



 Score = 41.2 bits (95), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 13/92 (14%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQA--------FSNVGISKEVVENRFGGLYRAFQCG 532
           ++DL   GFE+A+G   + + + ++Q          ++ G  + +V +       A + G
Sbjct: 411 KWDLYIRGFELATG--YSELVDPVIQRERFVDQARLASAGDDEAMVLDE--EFLAAMEQG 466

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           MPP  G   GIDR++M L G   +RE  LFP+
Sbjct: 467 MPPTTGTGMGIDRLLMALTGL-GIRETILFPI 497


>gi|53715300|ref|YP_101292.1| asparaginyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|59798505|sp|Q64P24|SYN_BACFR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|52218165|dbj|BAD50758.1| asparaginyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 467

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 112/276 (40%), Gaps = 34/276 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     +   D G+ V + GWV   R    + F+ + D   I  V    D A F  E+ 
Sbjct: 6   RTKIVDLMKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQVVVDLANFDEEML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYP 121
           K + +   L ++G++     E++ A     + E+ A++IE+L   +   PL   G     
Sbjct: 66  KQITTGACLSVNGVL----TESVGAG---QKAEVQAREIEVLGTCDNTYPLQKKGH---- 114

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARD 179
            S+ F      LR  T     V R R  +  ++      + F    TPI+TAS  EGA  
Sbjct: 115 -SMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQ 173

Query: 180 FLVPSRVN--------QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRD 222
               + +N         GS      F+    +     QL   L A+     +   P FR 
Sbjct: 174 MFQVTTMNLYDLKKDENGSIVYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRA 233

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           E+  + R   EF+ ++ E++F E  + ++  E  ++
Sbjct: 234 ENSNTPRHLAEFWMIEPEVAFNEIQENMDLAEEFIK 269


>gi|326430801|gb|EGD76371.1| lysyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 796

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 120/261 (45%), Gaps = 24/261 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G +   R  G  ++F DI       QV+A       EI++   +     I GL+  
Sbjct: 109 VSVAGRIQLKRASGKRLVFYDIHGEGTKLQVMA-------EISRHDATPDFETIHGLL-- 159

Query: 80  RSAETIN-----ANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           R  + I           G++ +  +++++L+     LP   FG     +  R++ R+LDL
Sbjct: 160 RRGDVIGIVGFPTRTKRGELSIVPKEVQLLAPCLHMLPHQHFGITN--KETRYRQRYLDL 217

Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVP-SRVNQGS 190
             + ++  N V R  II+ +R  +    F+E  TP++   +    A+ F+   + +N   
Sbjct: 218 ITNRSVRNNFVVRANIISYVRRFLDMNGFLEVETPMMNMVAGGATAKPFITHHNDLNLDL 277

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L  AP+ Y ++L+  GFDR +++   FR+E       P EF   +  M++ + +D++
Sbjct: 278 F--LRVAPELYLKMLVVGGFDRVYELGRQFRNEQIDMTHNP-EFTSCEFYMAYADFNDLM 334

Query: 251 NTMENVLRGVFEEFSNGNTVS 271
              E ++ G+ +       V+
Sbjct: 335 VMTEELIAGMVKSIKGTYKVT 355



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 518 KALEHGLPPTAGWGMGIDRMTMFLTDSNNIKEVLLFP 554


>gi|312130493|ref|YP_003997833.1| lysyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311907039|gb|ADQ17480.1| lysyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 567

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 110/254 (43%), Gaps = 21/254 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +++D  G  Q+    D  C +  K++   +      L+   
Sbjct: 53  VSVAGRLMSFRIMGSASFAELQDETGRIQIYIRRDDICPDEDKTL---YNTVFKKLLDIG 109

Query: 81  SAETINA---NIITGQIELSAQKIEILSVAEELPLPVFGEREY---------PESIRFKY 128
               IN       TG+I +  +  ++LS + + PLPV    E          PE  RF+ 
Sbjct: 110 DIIGINGYCFETQTGEISIHVRSFKLLSKSLK-PLPVVKRDEQGNVYDGFTDPEQ-RFRQ 167

Query: 129 RFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R++DL  +  ++ I +KR  II +MR     + ++E  TPIL +      AR F+     
Sbjct: 168 RYVDLIVNPENREIFIKRATIIRTMRQIFDNKGWLEVETPILQSIHGGAAARPFVTHHNT 227

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  A + Y + L+  GFD  ++    FR+E       P EF  L+  +++ + 
Sbjct: 228 LDIPLY-LRIANELYLKRLIVGGFDGVYEFGKMFRNEGMDRTHNP-EFTALEFYVAYKDY 285

Query: 247 DDILNTMENVLRGV 260
             ++   E +L  V
Sbjct: 286 HWMMEFTEELLEKV 299



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  GI  GIDR+ MLL    +++EV  FP
Sbjct: 459 RALEYGMPPTAGIGIGIDRLTMLLTNNASIQEVLFFP 495


>gi|259149288|emb|CAY82530.1| Msk1p [Saccharomyces cerevisiae EC1118]
          Length = 576

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
           + L   K+ I+    +LPLP    R   E+     R +D + +     +V R RII  +R
Sbjct: 183 LSLICNKLPIVLSVSQLPLP---SRLNDETKIKSNRVVDYQLNGTQTLLV-RARIIKLLR 238

Query: 154 CRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
             +   NF+E  TPIL++ S    A+ F+  S+        L  AP+ + + L+ SG  +
Sbjct: 239 KFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDHLELRIAPELWLKRLIISGLQK 296

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            ++I   FR+E   S     EF  L+   +++  DDI+   E++ +
Sbjct: 297 VYEIGKVFRNEGIDSTH-NAEFSTLEFYETYMSMDDIVARTEDLFK 341


>gi|255311616|ref|ZP_05354186.1| lysyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317917|ref|ZP_05359163.1| lysyl-tRNA synthetase [Chlamydia trachomatis 6276s]
          Length = 526

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 4/150 (2%)

Query: 122 ESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           + IR++ R+ DL   + + K  + R+RI+  +R  M  ++F+E  TPIL T      A  
Sbjct: 171 KEIRYRKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQTIYGGAEATP 230

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+   +      +         K+LL+  G  R ++I   FR+E       P EF  ++ 
Sbjct: 231 FVTTLQALHAEMFLRISLEIALKKLLVG-GMSRVYEIGKVFRNEGIDRTHNP-EFTMIEA 288

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
             ++ + +D++  +EN++  +    +NG T
Sbjct: 289 YAAYWDYNDVMKCVENLIEYIVRALNNGET 318



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 24/33 (72%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP GG   GIDR+VM+L  A ++R+V  FP+
Sbjct: 485 GMPPAGGFGIGIDRLVMMLTDAASIRDVLFFPV 517


>gi|256831144|ref|YP_003159872.1| lysyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256580320|gb|ACU91456.1| lysyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 502

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 23/243 (9%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---IAKSVRSEWVLCIDGLVMS 79
           L G +   R  G   F  I+D  G  QV A  D    E   + K      ++ + G +  
Sbjct: 67  LCGRIMAHRSFGKATFFHIQDTSGKIQVYAQRDDLGVEQYGVFKKFEIGDIVGVSGALFR 126

Query: 80  RSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                      TG++ + +  + +LS +   LP    G ++     R++ R++DL  +  
Sbjct: 127 TK---------TGELTIKSAAVRLLSKSMRPLPEKYHGLKDV--ETRYRQRYVDLLVNDR 175

Query: 139 HKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF---YAL 194
            ++I  KRT I+  +R  +    F+E  TP++    P        P R +  +      L
Sbjct: 176 ARDIFRKRTAIVQFIRNFLNERGFLEVETPMM---QPIAGGATAKPFRTHHNALDMDLFL 232

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GFDR ++I   FR+E   +   P EF  ++   ++    D+++  +
Sbjct: 233 RIAPELYLKRLLVGGFDRVYEINRNFRNEGIDTRHNP-EFTMIEFYWAYATFVDLMDLTQ 291

Query: 255 NVL 257
            +L
Sbjct: 292 ELL 294



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL  + ++REV LFP+
Sbjct: 458 RALEYGMPPAAGQGIGIDRLVMLLTDSPSIREVILFPL 495


>gi|332093529|gb|EGI98587.1| asparaginyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 463

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 54/280 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 13  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 60

Query: 76  LVMSRSAETINANIITG----------QIELSAQKIEILSVAEEL-PLPVFGEREYPESI 124
            V+  +  T  + I+TG          Q E+ A K+E+    E+    P+  +R    SI
Sbjct: 61  DVLRLT--TGCSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRH---SI 115

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +   
Sbjct: 116 EYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF- 174

Query: 183 PSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRD 222
             RV+      LP+  Q                    Q      A    + +   P FR 
Sbjct: 175 --RVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRA 232

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E+  + R   EF+ L+ E++F   +DI    E +L+ VF+
Sbjct: 233 ENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFK 272



 Score = 37.0 bits (84), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+ +    +G++KE         YR  +  G  PH G  
Sbjct: 378 DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 432

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 433 LGFERLIAYVTGVQNVRDVIPFPRT 457


>gi|238785825|ref|ZP_04629795.1| Asparaginyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238713278|gb|EEQ05320.1| Asparaginyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 463

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 123/320 (38%), Gaps = 63/320 (19%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV------- 65
           G + V S V + GWV R R          RD       VA  D +CF+  ++V       
Sbjct: 9   GRAAVDSEVTVRGWV-RTR----------RDSKAGISFVAVYDGSCFDPLQAVVNNTLPN 57

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILS-VAEELPLPVFGEREYPES 123
             + VL +          T+ A+   GQ  E+ A  I+++  V +    P+  +R    S
Sbjct: 58  YQDEVLHLTTGCSVEVTGTVVASPGEGQSFEIQATAIKVVGWVDDPDTYPMAAKRH---S 114

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181
           I +      LR  T     V R R  +     R   EN +   STP++TAS  EGA +  
Sbjct: 115 IEYLREVAHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMF 174

Query: 182 VPS--------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             S        R + G+      F+   A      Q      AS   + +   P FR E+
Sbjct: 175 RVSTLDLENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYASALSKVYTFGPTFRAEN 234

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT--------------- 269
             + R   EF+ ++ E++F   DD+    E +L+ VF+   N                  
Sbjct: 235 SNTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERVDKDAL 294

Query: 270 ------VSNNFLRICYDDAI 283
                 V+++F ++ Y DAI
Sbjct: 295 DRLQRFVTSDFAQVNYTDAI 314


>gi|238763361|ref|ZP_04624325.1| Asparaginyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238698460|gb|EEP91213.1| Asparaginyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 466

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 118/302 (39%), Gaps = 43/302 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV------- 65
           G + V S V + GWV R R          RD       VA  D +CF+  ++V       
Sbjct: 12  GRAAVDSEVTVRGWV-RTR----------RDSKAGISFVAVYDGSCFDPLQAVVNNTLPN 60

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILS-VAEELPLPVFGEREYPES 123
             + VL +          T+ A+   GQ  E+ A  I+++  V +    P+  +R    S
Sbjct: 61  YQDEVLHLTTGCSVEVTGTVVASPGEGQSFEIQATAIKVVGWVDDPDTYPMAAKRH---S 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181
           I +      LR  T     V R R  +     R   EN +   STP++TAS  EGA +  
Sbjct: 118 IEYLREVAHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMF 177

Query: 182 VPS--------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             S        R + G+      F+   A      Q      AS   + +   P FR E+
Sbjct: 178 RVSTLDLENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYASALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD-DAI 283
             + R   EF+ ++ E++F   DD+    E +L+ VF+   N       F     D DA+
Sbjct: 238 SNTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERVDKDAV 297

Query: 284 RR 285
            R
Sbjct: 298 DR 299



 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLISYVTGVQNVRDVIPFPRT 460


>gi|221217364|ref|ZP_03588835.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|221192642|gb|EEE18858.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 72a]
          Length = 462

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/262 (20%), Positives = 106/262 (40%), Gaps = 28/262 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF--EIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F  +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----- 187
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKLN 185

Query: 188 --------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NTLSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLR 258
           ++ EM+F + +D +   E++L+
Sbjct: 246 IEPEMAFYKLNDNIALAEDLLK 267


>gi|157146376|ref|YP_001453695.1| asparaginyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|157083581|gb|ABV13259.1| hypothetical protein CKO_02135 [Citrobacter koseri ATCC BAA-895]
          Length = 492

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 108/277 (38%), Gaps = 48/277 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 42  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 89

Query: 76  LVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFK 127
            V+  +  T  + I+TG++  S    Q  EI +   E+   V     YP      SI + 
Sbjct: 90  DVLRLT--TGCSVIVTGKVVASPGQGQSFEIQATTVEVTGWVEDPDTYPMAAKRHSIEYL 147

Query: 128 YRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
                LR  T     V R R  +  ++      + F   STP++TAS  EGA +     R
Sbjct: 148 REVAHLRPRTNMIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF---R 204

Query: 186 VNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDP 225
           V+      LP+  Q                    Q      A    + +   P FR E+ 
Sbjct: 205 VSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENS 264

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            + R   EF+ L+ E++F   +D+    E +L+ VF+
Sbjct: 265 NTSRHLAEFWMLEPEVAFANLNDVAGLAEAMLKYVFK 301



 Score = 37.4 bits (85), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 407 DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 461

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 462 LGFERLIAYVTGVQNVRDVIPFPRT 486


>gi|300704643|ref|YP_003746246.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum
           CFBP2957]
 gi|299072307|emb|CBJ43640.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum
           CFBP2957]
          Length = 510

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 123/284 (43%), Gaps = 22/284 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q     D    E+  + +  W L   G +++ 
Sbjct: 70  VAIAGRMMLKRVMGKASFATVQDGSGQIQFYITRDRVGEEVYAAFK-HWDL---GDIIAA 125

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N   G++ +  Q++ +LS +   PLP        + ++++ R++DL      +
Sbjct: 126 RGVLFRTN--KGELSVQVQELRLLSKSLR-PLPDKFHGLADQEMKYRQRYVDLIVSPETR 182

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  + RT+ I S+R  M    F+E  TP+L        A+ F+          + L  AP
Sbjct: 183 NTFRARTKAIASLRRHMGDAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMF-LRIAP 241

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R ++I   FR+E   S R   EF  ++   ++ +   +++  EN++R
Sbjct: 242 ELYLKRLIVGGFERVYEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDYTENLIR 300

Query: 259 GVFEEFSNGNTV----------SNNFLRICYDDAIRRYGTDKPD 292
               + + G+ V          S  F R+    AI++Y     D
Sbjct: 301 RAAID-ATGSAVLNYQGRELDLSKPFHRLTIAQAIQKYAPQYTD 343



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E   + F      K+  +     +   Y RA + GMPP 
Sbjct: 418 RFELFITGREIANGFSELNDPEDQAERFRKQVEQKDAGDEEAMYYDADYIRALEYGMPPT 477

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + N+R+V LFP
Sbjct: 478 GGCGIGIDRLVMLLTDSPNIRDVILFP 504


>gi|296437261|gb|ADH19431.1| lysyl-tRNA synthetase [Chlamydia trachomatis G/11222]
          Length = 526

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 4/150 (2%)

Query: 122 ESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           + IR++ R+ DL   + + K  + R+RI+  +R  M  ++F+E  TPIL T      A  
Sbjct: 171 KEIRYRKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQTIYGGAEATP 230

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+   +      +         K+LL+  G  R ++I   FR+E       P EF  ++ 
Sbjct: 231 FVTTLQALHAEMFLRISLEIALKKLLVG-GMSRVYEIGKVFRNEGIDRTHNP-EFTMIEA 288

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
             ++ + +D++  +EN++  +    +NG T
Sbjct: 289 YAAYWDYNDVMKCVENLIEYIVRALNNGET 318



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 24/33 (72%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP GG   GIDR+VM+L  A ++R+V  FP+
Sbjct: 485 GMPPAGGFGIGIDRLVMMLTDAASIRDVLFFPV 517


>gi|219681718|ref|YP_002468104.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682273|ref|YP_002468657.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471416|ref|ZP_05635415.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|219622006|gb|ACL30162.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624561|gb|ACL30716.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086097|gb|ADP66179.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086671|gb|ADP66752.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087255|gb|ADP67335.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 466

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 133/342 (38%), Gaps = 59/342 (17%)

Query: 6   THSCGDLGVSD--VGSFVRLSGWV-HRVRPHGGIIFLDIRDH--YGITQVVANPDSACF- 59
           T S  D+   D  V S + + GWV +R     G  F+ I D   +   QV+AN     + 
Sbjct: 3   TVSISDIYKDDIIVNSLITVCGWVRNRRSSKSGFSFITIYDGSCFNSIQVIANNTLPNYY 62

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGE 117
            EI        V+    L++S   +         + E+  +KI++L   E     P+  +
Sbjct: 63  KEILHLTTGCSVMLSGKLILSIGDKQ--------KYEIQLKKIKVLGWVENPETYPISSK 114

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPE 175
           +   E +R       LR  T     + R R  I++S+      E +    TPI+T+ + E
Sbjct: 115 KHSTEYLR---EVAHLRSRTNLIGAIARIRNYILHSLHHFFYKEKYYWVPTPIITSLNTE 171

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAP 218
           GA +    S ++  +      +   +K+        L  SG            + +   P
Sbjct: 172 GAGEMFRVSTLDMENIPKNLDSSVDFKKDFFGKESFLTVSGQLNLETYACSLSKVYTFGP 231

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV--------------FEEF 264
            FR E+  + R   EF+ L++E +F + +DI +  E +L+ V               E +
Sbjct: 232 TFRAENSNTGRHLAEFWMLEVESAFTDLNDISDFAECMLKYVCKSLLKKCITDINFLENY 291

Query: 265 SNGNTVSN-------NFLRICYDDAIRRYGTDKPDLRNPIIM 299
           +N N V         +F+RI Y + I      K    N + +
Sbjct: 292 TNSNIVDRLEKFLLVDFVRIDYVEVINILLDSKIKFNNSVFL 333


>gi|322712058|gb|EFZ03631.1| lysyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 616

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 16/248 (6%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V LSG V   R  G  +IFLDI + +   Q++ N +    E  K  R +       L+  
Sbjct: 124 VTLSGRVRSKRVVGKSLIFLDIVNEFQKVQIMINKNKCVSE--KHGRIQKFSLFKNLIQV 181

Query: 80  RSAETINANII---TGQIELSA-QKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLR 134
               ++  N      G+  L A Q  E+LS + E++P     E+      R   R +D+ 
Sbjct: 182 GDHISVIGNATRTKAGEPTLQAIQLPELLSPSMEQIP-----EKLTDPKARMADRHVDML 236

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            +    ++++ R  I   MR    ++ F+E  TPIL  ++    AR F+  +   +    
Sbjct: 237 VNREVVDVLRLRAEITKFMRDHFHSKRFLEFQTPILAENAGGAVARPFVTQATEFRKKDL 296

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           AL  AP+ + + L+  G D+ F+I P FR+E   +   P EF   +   ++    D++  
Sbjct: 297 ALRIAPELWLKRLVVGGVDKVFEIGPAFRNEGVDATHNP-EFTMCEFYSAYTNLADLIKE 355

Query: 253 MENVLRGV 260
            E +L G+
Sbjct: 356 TEELLFGL 363


>gi|307131486|ref|YP_003883502.1| asparaginyl-tRNa synthetase [Dickeya dadantii 3937]
 gi|306529015|gb|ADM98945.1| Asparaginyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 466

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 108/272 (39%), Gaps = 38/272 (13%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           V S V + GWV   R    GI F+ + D   +   Q V N + A ++      S+ +   
Sbjct: 16  VDSDVTVRGWVRTRRDSKAGISFIAVYDGSCFDSLQAVVNNNLANYQ------SDVLRLT 69

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLD 132
            G  +  + + + +       EL A +++++   E+    P+  +R    SI +      
Sbjct: 70  TGCSVEVTGKVVESPGEGQSFELQATELKVVGWVEDPDTYPMAAKRH---SIEYLREVAH 126

Query: 133 LRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T     V R R  +  ++        F   STPI+TAS  EGA +     RV+   
Sbjct: 127 LRPRTNLVGAVARVRHTLAQAIHRYFHQSGFYWVSTPIITASDTEGAGEMF---RVSTLD 183

Query: 191 FYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
              LP+  Q                    Q      A    + +   P FR E+  + R 
Sbjct: 184 LENLPRNDQGKVDFSEDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRH 243

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             EF+ ++ E++F   DD+    E++L+ VF+
Sbjct: 244 LAEFWMIEPEVAFATLDDVAALAESLLKFVFK 275


>gi|257437983|ref|ZP_05613738.1| asparagine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257199643|gb|EEU97927.1| asparagine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 462

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 107/270 (39%), Gaps = 42/270 (15%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G+ V + GW   +R    I F+ + D   +   QVV        E  K    E V+    
Sbjct: 17  GTVVTVCGWAKNIRDSKNIGFIALSDGGCFKTLQVV-------LEAGKLANYEEVIHTG- 68

Query: 76  LVMSRSAETINANIITGQ----IELSAQKIEILS--VAEELPLPVFGEREYPESIRFKYR 129
             +  S   +   ++T Q     EL+A  +EIL    A+E PL     ++   S+ +   
Sbjct: 69  --LYSSLRIVGRIVLTPQAKQPFELNADSVEILGDCPADEYPL-----QKKKMSMEYLRT 121

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRC-RMIAEN-FIECSTPILTASSPEGARDFL------ 181
              LR  T   N   R R + +    +   EN FI   +P+LTAS  EGA +        
Sbjct: 122 MPTLRPRTNTFNAAFRVRSVAAYAIHKFFQENGFIYSHSPLLTASDCEGAGEMFQVTTLD 181

Query: 182 ---VPSRVN-----QGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
              VP   +        F+  P       Q +   MA  F + +   P FR E   + R 
Sbjct: 182 LQNVPKNEDGTVDYSQDFFEKPVNLTVSGQLEAEAMAMAFGKVYTFGPTFRAEKSFTTRH 241

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
             EF+ ++ EM+F +    ++T E + + V
Sbjct: 242 AAEFWMIEPEMAFCDLKGYMDTAEAMTKFV 271


>gi|323455951|gb|EGB11818.1| hypothetical protein AURANDRAFT_70646 [Aureococcus anophagefferens]
          Length = 264

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 5/86 (5%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQ----AFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +D+   G EI SG  R H   ++++      S  G      E+   G   AF+ G  PHG
Sbjct: 172 FDMFMRGQEIVSGAQRVHDHALLMERVNFCHSGGGHGGPAPED-IKGYTDAFKYGAFPHG 230

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G++R+VML LG  N+R+VS FP
Sbjct: 231 GGGVGLERVVMLYLGLTNIRKVSCFP 256


>gi|309787803|ref|ZP_07682413.1| asparaginyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308924202|gb|EFP69699.1| asparaginyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 463

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 54/280 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 13  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 60

Query: 76  LVMSRSAETINANIITG----------QIELSAQKIEILSVAEEL-PLPVFGEREYPESI 124
            V+  +  T  + I+TG          Q E+ A K+E+    E+    P+  +R    SI
Sbjct: 61  DVLRLT--TGCSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRH---SI 115

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +   
Sbjct: 116 EYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF- 174

Query: 183 PSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRD 222
             RV+      LP+  Q                    Q      A    + +   P FR 
Sbjct: 175 --RVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRA 232

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E+  + R   EF+ L+ E++F   +DI    E +L+ VF+
Sbjct: 233 ENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFK 272


>gi|156102184|ref|XP_001616785.1| lysine-tRNA ligase [Plasmodium vivax SaI-1]
 gi|148805659|gb|EDL47058.1| lysine-tRNA ligase, putative [Plasmodium vivax]
          Length = 677

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 98/187 (52%), Gaps = 12/187 (6%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR--FLDLRRDTLHK-NIVKRTRI 148
           G+I L  ++I +L+ +  LPLP   + +  + + FKYR  +LD   +   K  I+ R  +
Sbjct: 255 GEITLHTEEIFLLTKSL-LPLP--DKYKGMKDVEFKYRKRYLDFLINKEEKEKIITRFAV 311

Query: 149 INSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
           I  +R  ++ + +IE  TPIL  S P G  A+ F    +      Y L  AP+ + + L+
Sbjct: 312 IQEIRKLLLRKKYIEVDTPIL-QSIPGGASAKPFETFLKSLNLVLY-LRIAPELFLKKLI 369

Query: 207 ASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
            SG  ++ F+ + CFR+E   +   P EF  L++  ++     ++  +E +++ V ++F+
Sbjct: 370 ISGISEQIFEFSKCFRNEGLSTIHNP-EFTLLEIYKAYSNYKYMIKFVERLIKKVLKKFT 428

Query: 266 NGNTVSN 272
             +TV N
Sbjct: 429 LRSTVHN 435



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A   G+PP GG+  GIDR+ MLL  + +++ V  FP+
Sbjct: 637 ALAHGLPPTGGLGIGIDRLCMLLTNSSSIKNVLPFPI 673


>gi|221134750|ref|ZP_03561053.1| lysyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 522

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/319 (21%), Positives = 132/319 (41%), Gaps = 54/319 (16%)

Query: 4   YRTHSCGDLGVSDVGSFVR--LSGWVHRVRPHGGII-----FLDIRDHYGITQVVANPDS 56
           +R     D   + +G F +  L    H     G I+     FL ++D  G  Q  A+ D+
Sbjct: 35  FRREDYADDLQAKLGEFDKPTLEEQAHTASIAGRIMAKRGPFLLLQDMSGQIQAYASKDT 94

Query: 57  ACFEIAKSVRSEW-------VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
                 K +++ +       ++ + G+V              G + ++  + E+L+ +  
Sbjct: 95  Q-----KDIKARFGSLDIGDIIGVKGVVHKSG---------KGDLYVNMDEYELLTKSLR 140

Query: 110 LPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
            PLP        +  +++ R++DL          + R++I+N +R  +   +F+E  TP+
Sbjct: 141 -PLPEKFHGLADQETKYRQRYVDLITSPETRATFLLRSKIVNGIRSFLADRDFMEVETPM 199

Query: 169 LTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           L    P GA  + F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   
Sbjct: 200 LQVI-PGGATAKPFVTHHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLS 257

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN------------- 273
           +   P EF  ++   ++ + +D+++  E++L+ + +       V N              
Sbjct: 258 TRHNP-EFTMIEFYQAYADYNDLMDLTEDMLKHLAQNVLGTTIVKNTVKNADGEVVETKE 316

Query: 274 ------FLRICYDDAIRRY 286
                 F R+   DAI +Y
Sbjct: 317 YDFGQPFQRLSMGDAILKY 335



 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 11/91 (12%)

Query: 484 LVCNGFEIASGG--IRNHMSEVMLQAFSNVGISKEVVENRFGG---------LYRAFQCG 532
            + + FE   GG  + N  SE+           K+V E   G             A + G
Sbjct: 415 FITDRFEFFVGGRELANGFSELNDSEDQAARFKKQVEEKDAGDDEAMHFDEDYITALEYG 474

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP  G   GIDR+VML   +  +++V LFP
Sbjct: 475 MPPTAGEGIGIDRLVMLFSDSPTIKDVILFP 505


>gi|331651951|ref|ZP_08352970.1| asparagine--tRNA ligase [Escherichia coli M718]
 gi|331050229|gb|EGI22287.1| asparagine--tRNA ligase [Escherichia coli M718]
          Length = 481

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 54/280 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 31  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 78

Query: 76  LVMSRSAETINANIITG----------QIELSAQKIEILSVAEEL-PLPVFGEREYPESI 124
            V+  +  T  + I+TG          Q E+ A K+E+    E+    P+  +R    SI
Sbjct: 79  DVLRLT--TGCSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRH---SI 133

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +   
Sbjct: 134 EYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF- 192

Query: 183 PSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRD 222
             RV+      LP+  Q                    Q      A    + +   P FR 
Sbjct: 193 --RVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRA 250

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E+  + R   EF+ L+ E++F   +DI    E +L+ VF+
Sbjct: 251 ENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFK 290



 Score = 37.0 bits (84), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+ +    +G++KE         YR  +  G  PH G  
Sbjct: 396 DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 450

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 451 LGFERLIAYVTGVQNVRDVIPFPRT 475


>gi|317486635|ref|ZP_07945452.1| lysyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316922018|gb|EFV43287.1| lysyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 527

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/314 (20%), Positives = 125/314 (39%), Gaps = 39/314 (12%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           R    +C    + ++      +G +   R  G + F  + D  G  Q  A+ D    E  
Sbjct: 73  RAEYEACSATELEELNESFTCAGRIISHRSFGKVAFFHLMDRSGRIQCYASKDLMGEEAY 132

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYP 121
           K  +   +                 +I+    +L   K + L++A +++ L     R  P
Sbjct: 133 KHFKKFDI----------------GDIVGVHGKLFRTKTDELTLACDQVTLLTKSFRSLP 176

Query: 122 ES--------IRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TA 171
           E         IR++ R++DL  +   ++I  KR++II + R  +    F+E  TP+L   
Sbjct: 177 EKHKGLTNVEIRYRQRYVDLITNPKVRDIFRKRSKIIRTFRAFLEERGFVEVETPMLHPV 236

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F+          Y +  AP+ Y + L+  GF++ F++   FR+E   S R  
Sbjct: 237 AGGAAARPFITHHNALDMELY-MRIAPELYLKRLLVGGFEKVFELNRNFRNEGI-SIRHN 294

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS----------NNFLRICYDD 281
            EF   +   ++    D+++  E +   +  E      ++            + R+ + +
Sbjct: 295 PEFTMCEFYWAYATFYDLMDLTEELFSTIATEVCGSPIITYQGTELDLTPGKWQRLTFHE 354

Query: 282 AIRRYGTDKPDLRN 295
           ++ + G   P+  N
Sbjct: 355 SLEKIGGHSPEFYN 368



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL  + ++REV  FP+
Sbjct: 485 RALEYGMPPAAGEGIGIDRLVMLLTDSPSIREVIFFPL 522


>gi|317057283|ref|YP_004105750.1| asparaginyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315449552|gb|ADU23116.1| asparaginyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 457

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/308 (21%), Positives = 119/308 (38%), Gaps = 55/308 (17%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV-RSEWVLCIDG 75
           +G  V + GWV   R    + F+++ D   +  +    D A     K + R    L + G
Sbjct: 16  IGQQVTVCGWVRTSRNSKNVAFVELNDGTSLKNIQIVIDKADDPDYKDIPRVGCSLKVTG 75

Query: 76  -LVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRFLDL 133
            LV  R+A  IN         ++   I +L    ++ PL   G      ++ F      L
Sbjct: 76  ALVEGRNAAEIN---------VTPADITLLGDCPQDYPLQKKGH-----TLEFLRTMPHL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T   N V R R + +       +  NF+  +TP++T S  EGA +    + +   + 
Sbjct: 122 RGRTNTFNAVMRIRSVLAQAIHQYYQERNFVYVNTPLITGSDCEGAGEMFRVTTIGYSTE 181

Query: 192 Y---------------ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           Y               A      Q +  + A+   + +   P FR E+  + +   EF+ 
Sbjct: 182 YKTEDDYDAADFFGRRAGLSVSGQLEGEMAATAMGKIYTFGPSFRAENSNTPKHLAEFWH 241

Query: 237 LDMEMSFVEQDDILNTMENVLRGVF---------------EEFSNG------NTVSNNFL 275
           ++ E++F E +D++   E++++ V                  F  G        +S+ F 
Sbjct: 242 VEPEIAFAELEDVIEVAEDMVKHVIGTVLEKCPDEIAFFDAHFEKGLKARLEELISHEFG 301

Query: 276 RICYDDAI 283
           R+ Y +AI
Sbjct: 302 RVTYTEAI 309



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 14/34 (41%), Positives = 23/34 (67%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G  PHGG   G +R++M + G +N+R+V +FP +
Sbjct: 419 GTVPHGGFGLGFERLIMYVTGVQNIRDVIMFPRT 452


>gi|255037757|ref|YP_003088378.1| lysyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254950513|gb|ACT95213.1| lysyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 571

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/295 (22%), Positives = 123/295 (41%), Gaps = 42/295 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---------VL 71
           V ++G +   R  G   F + +D  G  Q+    D  C    K++ +           ++
Sbjct: 53  VTMAGRLMGFRIMGSAAFAEFQDSTGRVQLYFRRDDLCPGEDKTLYNTVFKKLLDIGDMI 112

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---------PE 122
            + G V +           TG+I +  Q+ +IL+ +   PLPV    E          PE
Sbjct: 113 AVTGFVFTTQ---------TGEISVHVQEFKILNKSLR-PLPVVKRDEDGNVHDGFTDPE 162

Query: 123 SIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
            +R++ R++DL  +   + I +KR RII +MR    +  ++E  TP+L +      AR F
Sbjct: 163 -LRYRQRYVDLIVNPEVREIFIKRARIITTMRSHFDSNGWLEVETPVLQSIHGGAAARPF 221

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                      Y L  A + + + L+  GF+  ++    FR+E       P EF  +++ 
Sbjct: 222 TTHHNALDLGLY-LRIATELHLKRLIVGGFEGVYEFGKLFRNEGMDRTHNP-EFTTVELY 279

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           +++ +   ++   E VL  V    +     + N         + R+   DAI+++
Sbjct: 280 VAYKDYLWMMKMTEEVLEKVALAVNGTTKATFNGVELDFAGPYPRLSITDAIKQF 334



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           R+ + GMPP  GI  GIDR+ MLL    +++EV  FP
Sbjct: 459 RSLEYGMPPTAGIGIGIDRLTMLLTDNVSIQEVIFFP 495


>gi|170769276|ref|ZP_02903729.1| asparagine tRNA synthetase [Escherichia albertii TW07627]
 gi|170121928|gb|EDS90859.1| asparagine tRNA synthetase [Escherichia albertii TW07627]
          Length = 466

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 110/277 (39%), Gaps = 48/277 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 63

Query: 76  LVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFK 127
            V+  +  T  + I+TG++  S    Q+ EI + + E+   V     YP      SI + 
Sbjct: 64  DVLRLT--TGCSVIVTGKVVASPGQGQQFEIQASSVEVAGWVEDPDTYPMAAKRHSIEYL 121

Query: 128 YRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
                LR  T     V R R  +  ++      + F   STP++TAS  EGA +     R
Sbjct: 122 REVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF---R 178

Query: 186 VNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDP 225
           V+      LP+  Q                    Q      A    + +   P FR E+ 
Sbjct: 179 VSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENS 238

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            + R   EF+ L+ E++F   +DI    E +L+ VF+
Sbjct: 239 NTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFK 275


>gi|328950741|ref|YP_004368076.1| Asparaginyl-tRNA synthetase [Marinithermus hydrothermalis DSM
           14884]
 gi|328451065|gb|AEB11966.1| Asparaginyl-tRNA synthetase [Marinithermus hydrothermalis DSM
           14884]
          Length = 439

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 116/305 (38%), Gaps = 47/305 (15%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74
           G  V L  W+   R  G I FL +RD  G  Q        D   FE A  +  E  L + 
Sbjct: 14  GQEVLLRAWLVNRRSKGKIHFLILRDGTGFLQATVFKGEVDEETFERADHLPQETALEVR 73

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----ESIRFKYR 129
           GLV + +          G  E++ + + ++    E         EYP       I F   
Sbjct: 74  GLVKADAR-------APGGYEIAVRGLRVIHTPTE---------EYPITPKEHGIEFLMD 117

Query: 130 FLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
              L         V R R  I  ++   +    FI    PILT ++ EG  D L    + 
Sbjct: 118 RRHLWLRHRRPWAVLRIRDEIERAIHDFLHERGFIRFDAPILTPNAVEGTTD-LFEVELF 176

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
            G    L Q+ Q Y +   A  F R +   P FR E  ++ R   EF+ ++ E++F+  +
Sbjct: 177 DGDKAYLSQSGQLYAEA-GALAFGRVYTFGPTFRAERSKTRRHLLEFWMVEPEVAFMTHE 235

Query: 248 DILNTMENV---------------LRGVFEEFSNGNTVSN-NFLRICYDDAIR---RYGT 288
           + +   E++               L  +  + S     +N N+ RI Y +A++       
Sbjct: 236 ENMQLQEDLVSYLVGRVLENRRTELEVLGRDVSRLEPAANGNYPRITYTEAVQLLEEVAK 295

Query: 289 DKPDL 293
           + PDL
Sbjct: 296 EDPDL 300


>gi|225549289|ref|ZP_03770262.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370147|gb|EEG99587.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 462

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/262 (20%), Positives = 106/262 (40%), Gaps = 28/262 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF--EIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F  +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----- 187
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKLN 185

Query: 188 --------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NTLSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLR 258
           ++ EM+F + +D +   E++L+
Sbjct: 246 IEPEMAFYKLNDNIALAEDLLK 267


>gi|145506673|ref|XP_001439297.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406481|emb|CAK71900.1| unnamed protein product [Paramecium tetraurelia]
          Length = 470

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 114/253 (45%), Gaps = 27/253 (10%)

Query: 20  FVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-----DSACFEIAKSV--RSEWVL 71
           FV ++G V  +R  G  ++F D++      QV+AN          FE   S+  R + + 
Sbjct: 119 FVSVAGRVVTIRSLGAKLMFYDLQGEGTQIQVMANEANHKDQELNFEKIHSLIKRGDIIG 178

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
                 ++++ E    +I  G I+L +  + +L      P   FG +++ +  R++ R+L
Sbjct: 179 VKGNPCLTKAGE---LSIAPGFIQLLSPTLHML------PTTHFGFKDHEQ--RYRMRYL 227

Query: 132 DLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL  +   ++I + R+ +I  +R     + FIE  TP L             P +    S
Sbjct: 228 DLIMNKKVRDIFLARSSVIKQLREYFDGKGFIEVETPSLNVIQGGATAK---PFKTFHNS 284

Query: 191 FYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
            +    +  AP+ Y ++L+  G DR ++I   FR+E       P EF  ++   ++ + +
Sbjct: 285 LHRDLFMRVAPELYLKMLIVGGLDRVYEIGKNFRNEGIDQTHNP-EFTAMEFYWAYCDYN 343

Query: 248 DILNTMENVLRGV 260
           D++   E VL  +
Sbjct: 344 DLMTVTEEVLSQI 356


>gi|121705394|ref|XP_001270960.1| asparaginyl-tRNA synthetase Slm5, putative [Aspergillus clavatus
           NRRL 1]
 gi|119399106|gb|EAW09534.1| asparaginyl-tRNA synthetase Slm5, putative [Aspergillus clavatus
           NRRL 1]
          Length = 540

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 108/263 (41%), Gaps = 43/263 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE----WVLCID 74
           ++++G++  VR      F +I D   I   Q +  P  AC E+A     E    W  C  
Sbjct: 50  IKVNGFIRSVRKQKRFAFAEISDGTTIEPLQAILKPAQAC-ELATGTAVEISGLWKACPP 108

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G   S               EL   +++++  A+    P+  +   PE +R   +   LR
Sbjct: 109 GKEQSH--------------ELQTTEVKVVGRADPETYPIQKKYHSPEFLR---QIPHLR 151

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAEN-----FIECSTPILTASSPEGARDF--LVPSRVN 187
             T   +++ R R     +   +  N     F++   P++T+S  EGA +   +VP    
Sbjct: 152 LRTPFNSLLSRFRSECLYQLGNVFRNAPHGGFVQVQPPLITSSDCEGAGETFTVVPREAA 211

Query: 188 QGS--------FYALPQAPQQYKQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
            GS        F+  P+      QL +   A+     + I P FR E   + R   EFY 
Sbjct: 212 TGSASDNEGEHFFRAPKYLTVSSQLHLEAYAAELGNVWTITPAFRAEKSDTPRHLSEFYM 271

Query: 237 LDMEMSFVEQDDIL-NTMENVLR 258
           L+ EM+F++    L +++E  LR
Sbjct: 272 LEAEMNFMDDLGALTDSVEYTLR 294


>gi|301090301|ref|XP_002895371.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262099042|gb|EEY57094.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 181

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 4/80 (5%)

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D++  G E+ SG  R H+ ++ ++    +G+ +E + N       +F+ G  PHGG   G
Sbjct: 97  DMMIRGEEMVSGAQRVHIPKLQMERMDILGVLQESMRNYI----YSFRLGALPHGGGGIG 152

Query: 543 IDRIVMLLLGAKNVREVSLF 562
           ++R+VML LG  N+ + S+F
Sbjct: 153 LERVVMLYLGLGNISKSSMF 172


>gi|171056979|ref|YP_001789328.1| lysyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|170774424|gb|ACB32563.1| lysyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 514

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/235 (22%), Positives = 110/235 (46%), Gaps = 15/235 (6%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           +G++ +    + +L+ +   P+P        +  +++ R++DL   D+  +    R++ +
Sbjct: 143 SGELSIKVTGLRLLTKSLR-PMPDKHHGMTDQEQKYRQRYVDLMTDDSARERFRARSKAV 201

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP-SRVNQGSFYALPQAPQQYKQLLM 206
            S+R  M+   F+E  TP+L    P GA  + F+   + ++Q  F  +  AP+ Y + L+
Sbjct: 202 ASIRGFMLEHQFLEVETPMLH-PIPGGANAKPFVTHHNALDQEMFLRI--APELYLKRLV 258

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
             GF+R F+I   FR+E       P EF  ++   ++    D+++  E +LR    + + 
Sbjct: 259 VGGFERVFEINRNFRNEGISVRHNP-EFTMMEFYAAYWNHHDLMDFTEQLLRHAATQATG 317

Query: 267 GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH-NVTEHFVHSEFRVFSKILSV 320
              VS     +  D+   R       +R+ +++H  +TE        + +K+ S+
Sbjct: 318 SARVSYAGKPVHLDEPFARLS-----VRDSLVVHAGLTEAEADDAAVIHAKLTSL 367



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR++MLL  + ++R+V LFP
Sbjct: 472 RALEYGMPPTGGCGIGIDRLMMLLTDSVSIRDVVLFP 508


>gi|256274455|gb|EEU09357.1| Msk1p [Saccharomyces cerevisiae JAY291]
          Length = 576

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 10/167 (5%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKY-RFLDLRRDTLHKNIVKRTRIINSM 152
           + L   K+ I+    +LPLP        + I+ K  R +D + +     +V R RII  +
Sbjct: 183 LSLICNKLPIVLSVSQLPLP----SRLNDEIKIKSNRVVDYQLNGTQTLLV-RARIIKLL 237

Query: 153 RCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
           R  +   NF+E  TPIL++ S    A+ F+  S+        L  AP+ + + L+ SG  
Sbjct: 238 RKFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDHLELRIAPELWLKRLIISGLQ 295

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + ++I   FR+E   S     EF  L+   +++  DDI+   E++ +
Sbjct: 296 KVYEIGKVFRNEGIDSTH-NAEFSTLEFYETYMSMDDIVARTEDLFK 341


>gi|225871967|ref|YP_002753421.1| lysine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225792518|gb|ACO32608.1| lysine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 558

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 5/152 (3%)

Query: 123 SIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
            +R++ R++DL  +   + + VKR +++ + R    +  ++E  TP++   +    AR F
Sbjct: 156 ELRYRQRYVDLFMNPEVREVFVKRAKVLAATRKFFDSRGYVEVETPMMQPIAGGAAARPF 215

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  G DR ++I   FR+E   +   P EF  L+  
Sbjct: 216 ITHHNALDIDLY-LRIAPELYLKRLVVGGLDRVYEINRNFRNEGISTQHNP-EFTMLEFY 273

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN 272
            ++    D++   E  +  V +E  NG TV+ 
Sbjct: 274 QAYANYHDLMKLTEEFITFVAQEV-NGTTVTE 304



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA   G+PP GG   GIDR+ M+L G++++R+V LFP+
Sbjct: 507 RALGYGLPPTGGEGIGIDRLTMVLTGSRSIRDVILFPL 544


>gi|228474093|ref|ZP_04058834.1| lysine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228274607|gb|EEK13448.1| lysine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 561

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 126/290 (43%), Gaps = 26/290 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-G 75
           G  V ++G +   R  G   F  ++D  G  Q+    D  C    K++ +E +   +D G
Sbjct: 44  GKDVVVAGRLMSFRIQGKASFATLQDSSGRVQLYFKRDDLCPGEDKTLYNEVFKKLLDLG 103

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-----EYPE-SIRFKYR 129
             +         N+    IE+   K+ +      LPLP    +     E+ +   R++ R
Sbjct: 104 DFIGVEGTLFTTNMGEKSIEVKQFKV-LCKTLRPLPLPKVDAQGKVHDEFNDVEQRYRMR 162

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRV 186
           ++DL  +   K + +KR R+ N+MR       +IE  TPIL A  P G  AR F+     
Sbjct: 163 YVDLVVNPQVKEVFLKRNRLFNAMREYFNNHGYIEVETPILQA-IPGGASARPFITHHNA 221

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  A + Y + L+  GFD  ++ A  FR+E       P EF  +++ +++ + 
Sbjct: 222 LDIPLY-MRIANELYLKRLIVGGFDGVYEFAKNFRNEGMDRTHNP-EFTGMEIYVAYKDY 279

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSN----------NFLRICYDDAIRRY 286
           + ++   EN+L    +   NG T +            + R+   +AI+R+
Sbjct: 280 NWMMEFTENLLEYCAKAV-NGTTKTTFGKHEVDFKAPYPRVTMTEAIKRF 328



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L   + ++EV  FP
Sbjct: 453 RALEYGMPPTSGLGIGMDRLIMFLTNNETIQEVLFFP 489


>gi|212543017|ref|XP_002151663.1| aspartyl-tRNA synthetase Dps1, putative [Penicillium marneffei ATCC
           18224]
 gi|210066570|gb|EEA20663.1| aspartyl-tRNA synthetase Dps1, putative [Penicillium marneffei ATCC
           18224]
          Length = 567

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R +  + + ++    G+  +     F     AF+ G PPH G   
Sbjct: 480 YDFFMRGEEIMSGAQRINDVKELEESMIKKGVDPKT--EGFEDYLNAFRQGCPPHAGGGL 537

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIVM  LG  NVR  +LFP
Sbjct: 538 GLNRIVMFFLGLPNVRLATLFP 559



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 94/239 (39%), Gaps = 42/239 (17%)

Query: 47  ITQVVANPDSACFEIAKSVRSEWVLCIDGLVM-SRSAETINANI------------ITGQ 93
           I QV          IA +  +E  L I  + M + +A+ +   +            I G+
Sbjct: 161 IVQVTGVAKKPAVPIASATLTELELQITKIYMIAEAAQVLPMQVKDAERPPPLTDGIEGE 220

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
            EL A+   I+++                  R   R LDL+ +T      +    I+S  
Sbjct: 221 PELDAEGTPIVTL----------------KTRLDNRVLDLQTET-----SQAITWISSGV 259

Query: 154 CRMIAENFIECS-----TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            ++  E  ++       +  L+ SS EG  +       N+  + A  Q+PQ  KQ+ +A 
Sbjct: 260 AQLFTEFMLKSGARWIFSSKLSGSSTEGGSEVFEVKYFNKKGYLA--QSPQLMKQMAIAG 317

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
             +  F++ P FR E+  + R   EF  LD E +F     ++L+  E +L  +  E   
Sbjct: 318 DMESVFEVGPVFRAENSNTHRHLTEFTGLDFEKTFRHHYHEVLDFAEELLVFILTELKE 376


>gi|206896287|ref|YP_002247421.1| lysyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206738904|gb|ACI17982.1| lysyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 491

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 115/272 (42%), Gaps = 26/272 (9%)

Query: 27  VHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---IAKSVRSEWVLCIDGLVMSRSAE 83
           V  +R HG + F D++D  G  Q+    D    +     K +    V+ + G V      
Sbjct: 50  VTSIRQHGKLTFADLKDFTGRLQISFRKDVLGDKYDFFKKFIDVGDVIYVRGSVYHTG-- 107

Query: 84  TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNI 142
                   G++ L  +   + S     PLP          +R++ R+LDL   D   +  
Sbjct: 108 -------RGELTLDVEDFRLQSKCLR-PLPEKWHGVKDPEVRYRQRYLDLIIDDDSRERF 159

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
            KR  II ++R  + ++ F+E  TPIL    S   A+ F+          Y L  AP+ Y
Sbjct: 160 RKRADIIKAIRELLWSKGFVEVETPILQPIPSGASAKPFVTHHNALDIDLY-LRIAPELY 218

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV----- 256
            + L+  G  + F++   FR+E    +  P EF  L++  +  + +D++   E++     
Sbjct: 219 LKRLVVGGVHKVFELGKNFRNEGIDQNHNP-EFTMLELYQTPGDYEDMMRITEDIFSAAA 277

Query: 257 -LRGVFEEFS-NGNTV--SNNFLRICYDDAIR 284
            + G  E  S  G TV  S  F R+ + +A +
Sbjct: 278 QVSGAAECVSFKGMTVNLSRPFKRLTFKEAFK 309



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL  A+N+++V  FP
Sbjct: 438 ALEYGLPPTGGLGVGIDRLVMLLTEAENIKDVIWFP 473


>gi|218249572|ref|YP_002374629.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226321988|ref|ZP_03797513.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|218164760|gb|ACK74821.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226232578|gb|EEH31332.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 462

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 106/265 (40%), Gaps = 34/265 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF--EIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F  +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +T       R +I   +        F   +TPI+T++  EGA +     RV+   F 
Sbjct: 126 IRTNTFGAIARIRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMF---RVSTLKFN 182

Query: 193 ALPQA-------------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            L  A                     Q      A    + +   P FR E+  + R   E
Sbjct: 183 KLNNALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASE 242

Query: 234 FYQLDMEMSFVEQDDILNTMENVLR 258
           F+ ++ EM+F + +D +   E++L+
Sbjct: 243 FWMIEPEMAFYKLNDNIALAEDLLK 267


>gi|283778438|ref|YP_003369193.1| lysyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283436891|gb|ADB15333.1| lysyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 528

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 3/89 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV--GISKEVVENRFG-GLYRAFQCGMPP 535
           A +++L   G E+A+     +  ++  Q F     G+++E    +      RA + GMPP
Sbjct: 434 AERFELFVYGMEVANAYTELNDPDLQDQLFRTQLDGMAEEDSMAKMDHDFIRALKHGMPP 493

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GG+  GIDR+VMLL    ++REV LFP+
Sbjct: 494 AGGLGIGIDRLVMLLTNTASIREVILFPL 522



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 112/245 (45%), Gaps = 17/245 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL--CID- 74
           G  VR +G +   R  G + F+DI+D  G  Q+           A+   ++W +  C D 
Sbjct: 94  GPKVRAAGRIVLSRDTGKLRFVDIQDWTGRIQLFIGR-------AQVGENDWAISECFDL 146

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++    E     +  G++ + A+K+  L+ +   P         PE +R + R++DL+
Sbjct: 147 GDLIGVDGELRYTKM--GELTIFAEKLHFLTKSIAPPPDKHKGLTDPE-LRHRMRYVDLQ 203

Query: 135 -RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
             D + +  + RT+I+ S+R  +  + F E   P L A +    AR F           +
Sbjct: 204 TTDGVLQRFLDRTKIVRSIRSTLTEQGFCEIEGPTLHAIAGGAAARPFTTHHNALNIDLF 263

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + + + L+  G +R F++   +R+E   S R   EF  L++  ++ +   +++ 
Sbjct: 264 -LRIALELHLKRLLVGGMERVFELGRVYRNEG-LSPRHNPEFTMLEVYQAYGDYRSMMDL 321

Query: 253 MENVL 257
            E+++
Sbjct: 322 TESII 326


>gi|158318146|ref|YP_001510654.1| lysyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158113551|gb|ABW15748.1| lysyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 496

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 33/286 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI----AKSVR-SEWVLC 72
           G+ VR++G V   R  GG++F  I+D  G  QV  + D    E     A++V+  ++V  
Sbjct: 29  GTAVRIAGRVVLWRRMGGLVFGHIQDRAGRVQVSLSRDELGVETFQEWARAVKIGDFVGV 88

Query: 73  IDGLVMSRSAE-TINAN---IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
              L  +R  E T+ A+   ++   +     K + LS  E      + +       R ++
Sbjct: 89  TGTLYTTRRGERTVGASELVVLNRTVRALPDKWQGLSNVEARLRRRYLDLLVNNDSRERF 148

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVN 187
           R               R R I+ +R  +   +F+E  TP+L  A+S   AR F+      
Sbjct: 149 R--------------TRARTISRIRRFLDDNDFLEVETPMLQEAASGAAARPFITHHNAL 194

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
              FY L  +P+ + + ++    DR +++   FR+E      L  EF  L+   ++ +  
Sbjct: 195 GEDFY-LRISPETFLKRVVVGSLDRVYELGRNFRNEGMDPSHLQ-EFTMLEWYAAYWDYR 252

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           D +  +  ++  V ++     TV+       YD     +G D P+L
Sbjct: 253 DNMRFVREMILAVLDDVFGSRTVT-------YDGVKLDFGADWPEL 291



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 27/40 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP  G+  GIDR++ LL  A  +REV LFP+ ++
Sbjct: 427 AMEYGMPPMSGLGIGIDRLIALLTDAPTLREVVLFPLMRD 466


>gi|322378400|ref|ZP_08052854.1| lysyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322380081|ref|ZP_08054337.1| lysyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147488|gb|EFX42132.1| lysyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321149156|gb|EFX43602.1| lysyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 504

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 19/270 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            D  S   L G +  +R  G   F+ I D   + QV  + +    ++ K     +  C++
Sbjct: 59  KDPSSICALVGRLRFIRLMGKACFIKIEDQSALLQVYLSQN----DLGKESFDLFKKCVE 114

Query: 75  -GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +++           TG++ L A   +IL+ +  +PLP          +R++ R+LDL
Sbjct: 115 VGDILNVVGYPFVTK--TGELSLHATSYKILTKSI-VPLPEKFHGLSDIELRYRQRYLDL 171

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +   K + K R+ I+ ++R     + F+E  TP++   +    AR F+      +   
Sbjct: 172 VVNPTVKEVFKTRSVIVATIRRFFEEKGFLEVETPMMHPIAGGANARPFITYHNALEVER 231

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  L+   ++   +D++ 
Sbjct: 232 Y-LRIAPELYLKRLVVGGFEAVFEINRNFRNEGMDHSHNP-EFTMLEFYWAYKTYEDLIT 289

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
             + +   + +       V N  L+I Y D
Sbjct: 290 LTQELFHKLLQ-------VLNLPLKIPYQD 312



 Score = 44.7 bits (104), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL  +K +++V LFP
Sbjct: 459 ALGLGMPPTAGEGIGIDRLVMLLTNSKTIKDVILFP 494


>gi|313672325|ref|YP_004050436.1| lysyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939081|gb|ADR18273.1| lysyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 490

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 108/243 (44%), Gaps = 19/243 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCIDGLV 77
           V ++G +  +R  G   F  I+D  G  Q+    D        S  +  V   + I G +
Sbjct: 52  VTVAGRILSMRHFGKATFATIKDRTGSIQIYIKRDDLTDVEKISFDNTDVGDFIGISGFL 111

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
                        TG++ + A+  +IL+ A  +LP    G ++    IR + R++DL  +
Sbjct: 112 FKTK---------TGELTIYAETFKILTKALRDLPEKWHGLKDI--EIRQRQRYVDLIVN 160

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
              K + K R+ II  +R     ++F+E  TP++   +    A+ F+          Y L
Sbjct: 161 PEVKEVFKKRSLIIKHIRDFFYNKDFLEVETPMMHPIAGGATAKPFITHHNTLDMKLY-L 219

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   ++ +  D++   E
Sbjct: 220 RIAPELYLKRLVVGGFERVFEINRNFRNEGISTKHNP-EFTMIEWYQAYADYFDLMKMTE 278

Query: 255 NVL 257
            ++
Sbjct: 279 ELI 281



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   G+DR+VMLL   K++REV LFP
Sbjct: 445 RALEYGLPPTAGEGLGVDRLVMLLTDTKSIREVILFP 481


>gi|312148011|gb|ADQ30670.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 462

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 107/262 (40%), Gaps = 28/262 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF--EIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F  +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS--RVNQ-- 188
           +R +T       R +I   +        F   +TPI+T++  EGA +    S  R N+  
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEIFRVSTLRFNKLN 185

Query: 189 ---------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLR 258
           ++ EM+F + +D +   E++L+
Sbjct: 246 IEPEMAFYKLNDNIALAEDLLK 267


>gi|255349179|ref|ZP_05381186.1| lysyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503716|ref|ZP_05382106.1| lysyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255507397|ref|ZP_05383036.1| lysyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525825|emb|CBJ15306.1| lysyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435405|gb|ADH17583.1| lysyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296439122|gb|ADH21275.1| lysyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 526

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 4/150 (2%)

Query: 122 ESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           + IR++ R+ DL   + + K  + R+RI+  +R  M  ++F+E  TPIL T      A  
Sbjct: 171 KEIRYRKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQTIYGGAEATP 230

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+   +      +         K+LL+  G  R ++I   FR+E       P EF  ++ 
Sbjct: 231 FVTTLQALHAEMFLRISLEIALKKLLVG-GMSRVYEIGKVFRNEGIDRTHNP-EFTMIEA 288

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
             ++ + +D++  +EN++  +    +NG T
Sbjct: 289 YAAYWDYNDVMKCVENLVEYIVRALNNGET 318



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 24/33 (72%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP GG   GIDR+VM+L  A ++R+V  FP+
Sbjct: 485 GMPPAGGFGIGIDRLVMMLTDAASIRDVLFFPV 517


>gi|229829267|ref|ZP_04455336.1| hypothetical protein GCWU000342_01354 [Shuttleworthia satelles DSM
           14600]
 gi|229792430|gb|EEP28544.1| hypothetical protein GCWU000342_01354 [Shuttleworthia satelles DSM
           14600]
          Length = 474

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 118/304 (38%), Gaps = 50/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDS-ACFEIAKSVRSEWVLCIDGLV 77
           V + GWV  +R      F+ + D    T  QVV + D  A +E          + + GLV
Sbjct: 31  VTVGGWVRSIRNSKNFSFMVLNDGSFFTPVQVVFSADKLANYEEISHQNVGAAVWVTGLV 90

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                 T+   +     E+ A +IE+   +     P+  +R   E +R     L  R +T
Sbjct: 91  ------TLTPEM-KQPFEIQATEIEVEGPSTP-DYPLQKKRHTLEYLR-TLPHLRARTNT 141

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-----------RDFLVPSRV 186
                  R+    ++       +F+   TPILT+S  EGA           +D  V  + 
Sbjct: 142 FEAAFRVRSVAAYAIHKFFQERDFVYTHTPILTSSDAEGAGEMFQATTLDLKDVPVDEKG 201

Query: 187 N---QGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           N      FY  P       Q +    A  F + +   P FR E+  + R   EF+ ++ E
Sbjct: 202 NVDFTQDFYGKPVNLTVSGQLQGETFAQAFKKIYTFGPTFRAENSNTTRHAAEFWMIEPE 261

Query: 241 MSFVEQDDILNTMENVLRGVF--------EEFSNGNT-------------VSNNFLRICY 279
           ++F + +D +   E +L+ V         EE +  N+             V ++F RI Y
Sbjct: 262 IAFADLEDAMELAEAMLKYVIAYVMEHCPEEIAFFNSFVDKGLIDRLNHVVRSDFGRISY 321

Query: 280 DDAI 283
            DA+
Sbjct: 322 TDAV 325



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + +L      G+     E+ +G      + G   H G   G +R+VM 
Sbjct: 397 EIIGGSQREDDYDKLLSRIRENGMD----ESTYGYYLDLRKYGSTRHAGFGLGFERLVMY 452

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP +   C+L
Sbjct: 453 LTGIANIRDVLPFPRTVGNCEL 474


>gi|223982711|ref|ZP_03632941.1| hypothetical protein HOLDEFILI_00215 [Holdemania filiformis DSM
           12042]
 gi|223965307|gb|EEF69589.1| hypothetical protein HOLDEFILI_00215 [Holdemania filiformis DSM
           12042]
          Length = 496

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GGI  GIDR VMLL G +++REV LFP  +N
Sbjct: 454 ALEYGLPPTGGIGIGIDRFVMLLTGQESIREVLLFPHMKN 493


>gi|325278150|ref|ZP_08143659.1| lysyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324096725|gb|EGB95062.1| lysyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 500

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 13/224 (5%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E   +V++ W L   G ++S  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLPEETLAAVKT-WDL---GDIIS--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCR 155
              + +L+ +   PLP           R++ R++DL    +T H   V R+++I+ +R  
Sbjct: 135 MTNVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRV-RSQVISHIRKF 192

Query: 156 MIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           +I  +F+E  TP+L T      A+ F         + + L  AP+ Y + L+  GF++ F
Sbjct: 193 LIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMF-LRIAPELYLKRLVVGGFEKVF 251

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +I   FR+E   +   P EF  L+   ++ +  D ++  E + R
Sbjct: 252 EINRNFRNEGVSTRHNP-EFTMLEFYQAYADYRDNMDLTEELFR 294



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 458 RALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFP 494


>gi|322495036|emb|CBZ30339.1| putative asparaginyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 884

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 117/309 (37%), Gaps = 54/309 (17%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS------ACFEIAK 63
           G+L     G+ V + GW HRVR    + F+ +RD  G  Q V +  +      +C  I  
Sbjct: 445 GELPSHKEGACVYVVGWAHRVRHQSRMSFVVLRDGTGFIQCVFDGSTEPFHRESCVAIRG 504

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R E        +       +N   + G    S   IE +  AE     ++ +R     
Sbjct: 505 TLRHE--PKAKSELQPPMELHVNEYAVVGD---SDGTIETVITAESSVDKLYDQRHI--- 556

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                    + R TL  +++K R  ++   R    +  + E + P L  +  EG      
Sbjct: 557 ---------VVRGTLASSVLKVRHELLRVFREHFWSRQYYEVTPPTLVQTQVEGGSTLF- 606

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
              +  G    L Q+ Q Y + + AS     +   P +R E  ++ R   EF  L++E  
Sbjct: 607 -EVLYYGEKAYLTQSSQLYLESVTAS-LGNVYCCMPSYRAERSKTKRHLSEFTHLEVEYD 664

Query: 243 FVEQDDILNTMEN----VLRGVFEEFS--------------NGN---------TVSNNFL 275
               +D+LN +E+    V+R V E                 NGN         T    F 
Sbjct: 665 VCSFEDLLNRLEDMLCTVIRTVIEHVGDLVAMLNPSQLIDPNGNVRDPANYKFTPKRPFR 724

Query: 276 RICYDDAIR 284
           R+ Y DAI+
Sbjct: 725 RLRYADAIQ 733



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 15/93 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVV-----ENRFGGLYRAFQCGMPPH 536
           D++  G  E+  G +R +  + +L A+   G+          + R+GG          PH
Sbjct: 799 DVLAPGIGEVLGGSMRMYKFDELLDAYKREGLDASTYYWYTDQRRYGGA---------PH 849

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           GG   G++R+++ +L   +V++  L+P     C
Sbjct: 850 GGFGLGVERLLVWMLNLDSVKDACLYPRYMGRC 882


>gi|302347902|ref|YP_003815540.1| lysyl-tRNA synthetase (LysS) [Acidilobus saccharovorans 345-15]
 gi|302328314|gb|ADL18509.1| lysyl-tRNA synthetase (LysS) [Acidilobus saccharovorans 345-15]
          Length = 498

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 13/242 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +  +G V  +R HG   F+DI D     Q+    +    E+    +        G ++  
Sbjct: 56  ISTAGRVANIRRHGKASFVDIFDEGERLQLYLRVN----ELGDRYKEFLYYVGRGDIIGV 111

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139
             +      + G++ L  +  ++L  A+ L  P    +  PE  R+ +R++D L  D   
Sbjct: 112 RGDLFYT--MKGELSLLVKDYQLL--AKALIEPPDWTKLSPE-FRYAHRYVDFLYNDQAR 166

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
           + +  R   I  +R  + ++ F+E  TP+L        A+ F+         +Y L  + 
Sbjct: 167 RAMEVRFNTIKEIRQYLYSKGFVEVETPVLQPVYGGALAKPFMTHVNALDEDWY-LRISL 225

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y +  +  GFD+ F+I   FR+ED      P EF  +++  ++ + +DI++  E+++R
Sbjct: 226 ELYLKRFIVGGFDKVFEIGKVFRNEDIDVTHNP-EFTMMELYWAYADYNDIMDLTEDMIR 284

Query: 259 GV 260
            V
Sbjct: 285 TV 286



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA   GMPP GG+  GIDR+VM+  G  +++EV  FPM
Sbjct: 452 RALSYGMPPTGGLGVGIDRLVMMFTGVSSIKEVLPFPM 489


>gi|254821219|ref|ZP_05226220.1| lysyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 1089

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 98/227 (43%), Gaps = 23/227 (10%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D    + +SG + R+R +GG++F  +RD  G  QV+   D++  +  ++ 
Sbjct: 632 SHTVAAALDTDDRETITVSGRILRIRDYGGVLFAHLRDWSGEMQVLL--DNSQLQRGRTA 689

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-------LPLPVFGER 118
                + +  LV            ++G +  S +    L V +         PLP   + 
Sbjct: 690 DFTAAIDLGDLVE-----------VSGHMGFSKKGTRSLIVGDWRMIGKCLRPLPNKWKG 738

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                 R + R++DL  +   + ++  R+ ++ S+R  +  + FIE  TPIL        
Sbjct: 739 LTDPEARVRTRYVDLAVNPESRELITARSEVLRSVRQTLFDKGFIEVETPILQQIHGGAT 798

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           AR F+          + L  AP+ Y + L   G +R F++   FR+E
Sbjct: 799 ARPFVTHINTYDMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNE 844



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+A+           R  + E  L A      + E+ E+      +A +
Sbjct: 997  AERWDLVAWGVELATAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDED----FLQAME 1052

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  G+DR+VML+ G +++RE   FP+++
Sbjct: 1053 YAMPPTGGLGMGVDRLVMLITG-RSIRETLPFPLAK 1087


>gi|71733658|ref|YP_276011.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|123747561|sp|Q48F26|SYK_PSE14 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71554211|gb|AAZ33422.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 500

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 20/263 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E    V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLAEETLAEVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTTVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L T      A+ F           + L  AP+ Y + L+  GF++ F+
Sbjct: 194 MKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRYGTD 289
           V      F+R+   D+I +Y  D
Sbjct: 312 VFHFGEPFVRLSVFDSILKYNPD 334



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 408 RFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTDSPSIRDVILFP 494


>gi|299143963|ref|ZP_07037043.1| asparagine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518448|gb|EFI42187.1| asparagine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 484

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 125/320 (39%), Gaps = 55/320 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V++ GW+   R      F+++ D   +G  Q+V +     F E+ K   S  +L    +V
Sbjct: 42  VKIEGWIKTSRSSKNFGFIELTDGSCFGSLQIVYDDKLQNFSEVEKYPISSSLLVEGKIV 101

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            S  A+          IEL A KIE    ++    P+  +R   E +R       LR  +
Sbjct: 102 ESPGAKQ--------PIELHAVKIEAYCESDR-DYPLQKKRHTMEYLR---TIAHLRGRS 149

Query: 138 LHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
              N V R R I +         + F+  +TP++TAS  EGA +    + ++        
Sbjct: 150 NTFNAVFRVRSILAFAIHKFFQEKGFVYVNTPLITASDAEGAGEMFQVTTLDLKNIPLTE 209

Query: 188 ------QGSFYALPQAPQQYKQLLMAS---GFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          QL   S    F   +   P FR E+  + R   EF+ ++
Sbjct: 210 DGKVDFSNDFFGKSTNLTVSGQLEAESFALAFGNVYTFGPTFRAENSNTARHAAEFWMIE 269

Query: 239 MEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLRI 277
            E++F + ++ +   E +L+ + +          EF N            N V+++F RI
Sbjct: 270 PELAFADLEENMRISEEMLKYIIKYVLDNAKDEMEFFNSFIDKGLFERLNNVVNSDFGRI 329

Query: 278 CYDDAIRRYGTDKPDLRNPI 297
            Y +AI        + + P+
Sbjct: 330 TYTEAIEVLKKSGREFKYPV 349


>gi|256822768|ref|YP_003146731.1| asparaginyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796307|gb|ACV26963.1| asparaginyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 465

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/310 (21%), Positives = 120/310 (38%), Gaps = 53/310 (17%)

Query: 18  GSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCID 74
           G  V + GWV   R    G+ F++I D   +   Q V + + A +E      SE +    
Sbjct: 16  GEQVTVQGWVRTRRDSKAGLSFVNIHDGSCFNPIQAVVDNNVANYE------SEVIKVTA 69

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G  +  + + + +       E+ A ++E+L  V +    P+   +  P S+ F      L
Sbjct: 70  GCSIRVTGKLVESQGKGQSYEIQASEVEVLGWVDDPDTYPI---QPKPHSVEFLRDNAHL 126

Query: 134 RRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T     V R R  +  ++   M  + +    TPI+TAS  EGA +    S ++  + 
Sbjct: 127 RPRTNLIGAVTRVRNCLAQAVHRFMHEQGYFWIHTPIITASDAEGAGEMFRVSTLDMTNL 186

Query: 192 YALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEF 234
               +    Y +        L  SG            + +   P FR E+  + R   EF
Sbjct: 187 PKTDKGDIDYSKDFFGKESFLTVSGQLNVESYCMAMSKVYTFGPTFRAENSNTSRHLAEF 246

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNN 273
           + ++ E++F    D  +  E +++ +F+   +                      N +++N
Sbjct: 247 WMVEPEIAFANLSDNADLAEAMMKYIFKAVLDECADDMAFFQQRVDKDCINRLENVINHN 306

Query: 274 FLRICYDDAI 283
           F R+ Y D I
Sbjct: 307 FERMDYTDVI 316


>gi|229496852|ref|ZP_04390561.1| lysyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316263|gb|EEN82187.1| lysyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 581

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 20/256 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCID-GLVM 78
           VRL+G +   R  G   F+++ D  G  Q+    DS A  E        +  C+D G  +
Sbjct: 60  VRLAGRIMGRRIMGKASFVELADSTGRIQIYITRDSIADGENTDLYNVVFKKCLDIGDFI 119

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFKYRF 130
                       TG++ + A  + +LS +   PLP+  E++         PE  R++ R+
Sbjct: 120 GVEGYVFKTQ--TGEVSVHALSLTVLSKSLR-PLPIVKEKDGKVFDGFTDPEQ-RYRRRY 175

Query: 131 LDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVN 187
           +DL   D +    +KR +I  SMR       ++E  TPIL  S P G  AR F+      
Sbjct: 176 VDLLVNDGVRDIFLKRNKIFTSMRNFFNEHGYLEVETPIL-QSIPGGAAARPFITHHNAL 234

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A + Y + L+  GF+  ++ +  FR+E       P EF  +++ +++ + +
Sbjct: 235 DIPLY-LRIANELYLKRLIVGGFEGVYEFSRNFRNEGMDRTHNP-EFTCMEIYVAYKDYN 292

Query: 248 DILNTMENVLRGVFEE 263
            +++  E++L  + +E
Sbjct: 293 WLMDFTESMLSRIAQE 308



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR+VMLL G ++++EV  FP
Sbjct: 465 RALEYGMPPTAGLGIGMDRLVMLLTGQESIQEVLFFP 501


>gi|319942341|ref|ZP_08016656.1| lysyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804214|gb|EFW01114.1| lysyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 509

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 139/324 (42%), Gaps = 46/324 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD-----HYGITQVVANPDS-ACFEIAKSVRSEWVLCID 74
           V  SG +   R  G   F  +RD      Y + Q    PD+ A F   K+     ++   
Sbjct: 71  VACSGRIMLKRIMGKASFCTVRDFTGTMQYFVQQNEVGPDAYAAF---KTFDLGDIVAAK 127

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G++    A         G + +  ++I +++ +   PLP   +      + ++ R++DL 
Sbjct: 128 GVLFRTHA---------GDLAIRVKEIRLMTKSIR-PLPDKHKGLQDTELCYRQRYVDLI 177

Query: 135 RDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSF 191
            +   +N  + R++ I ++R  M+   F+E  TP+L    P GA  + F+          
Sbjct: 178 MNEESRNRFLTRSKAIAAIRAFMLNHRFLEVETPMLH-PIPGGANAKPFITHHNALDMDM 236

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D ++
Sbjct: 237 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEG-VSVRHNPEFTMMEFYATYWTYRDQMD 294

Query: 252 TMENVLRGVFEEFSNGNTV----------SNNFLRICYDDAIRRYGTDKPD--LRNPIIM 299
             E +LR V +E + G+ V          S  F R+    AI+++  +  D  L NP   
Sbjct: 295 FTEELLRTVAKE-ATGSMVLQYQGHEIDLSKPFHRLTPLAAIKKFAPNYTDEELNNP--- 350

Query: 300 HNVTEHFVHSEFRVFSKILSVNPG 323
                 F+ +E +     + V+ G
Sbjct: 351 -----DFIRAELKRLGGEIPVDAG 369



 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR +MLL  A  +R+V LFP
Sbjct: 465 RALEYGLPPTAGCGIGIDRFMMLLTDAPTIRDVLLFP 501


>gi|226293463|gb|EEH48883.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 541

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 6/84 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI--SKEVVENRFGGLYRAFQCGMPPHGGI 539
           YD    G EI SG  R + ++ +  A  + G+  + E  E+  G    AF+ G PPH G 
Sbjct: 454 YDFFMRGEEIMSGAQRINDAKELEAAMVSKGLDPNDEGFEDYIG----AFRQGCPPHAGG 509

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             G++RIVM  LG  N+R  +LFP
Sbjct: 510 GLGLNRIVMFFLGLPNIRLATLFP 533


>gi|328954383|ref|YP_004371717.1| Lysyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328454707|gb|AEB10536.1| Lysyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 493

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 6/149 (4%)

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFL 181
           R++ R+LDL  +   K + + R+RII  +R  M    F+E  TP++    P GA  R F 
Sbjct: 155 RYRQRYLDLFVNPEVKGVFRARSRIIRLVRDFMEQREFLEVETPMMQ-PIPGGATARPFQ 213

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
               V     Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   
Sbjct: 214 TYHNVLAMPLY-LRIAPELYLKRLLVGGFERVFEINRSFRNEGVSTQHNP-EFTMMEFYQ 271

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTV 270
           ++   +D++   E +   +  + + G  +
Sbjct: 272 AYATYEDLMMLTEEMFGQIATQITGGRQI 300



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 451 RALEYGMPPAAGEGIGIDRLVMLLTDSASIRDVILFP 487


>gi|326384378|ref|ZP_08206059.1| lysyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326196976|gb|EGD54169.1| lysyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 1131

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 20/225 (8%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIA 62
           TH+      ++ G  VR++G + R R  G + F D+ D  G  QV+    +      + A
Sbjct: 677 THTVAQAAAAEAGETVRIAGRLTRKRDFGKVTFADLHDQSGEIQVLVESQAIVAQPLDFA 736

Query: 63  KSVRSEWVLCIDGLV-MSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREY 120
            ++    ++ + G V  SRS E    +++     L+ + +         PLP  +     
Sbjct: 737 STIDLGDLVEVTGTVGTSRSGEL---SVLATDWRLNGKCLH--------PLPDKWSGLTD 785

Query: 121 PESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           PE+ R + R++DL      +  ++ R+ ++ ++R  + A+ F+E  TPIL      GA  
Sbjct: 786 PEA-RVRQRYVDLAVSARSRELLITRSAVVRALRDHLAAQGFLEVETPILQQIH-GGANA 843

Query: 180 FLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
               + +N  +    L  AP+ Y + L   G ++ F++   FR+E
Sbjct: 844 TPFRTHINAYNLDLYLRIAPELYLKRLCVGGIEKVFEMGRNFRNE 888



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 13/105 (12%)

Query: 470  KGNDLLSIKAFQYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENR 521
            +G+  +   A ++DLV  G E+ +           R  ++E  + A      + E+ E+ 
Sbjct: 1029 RGHRSIEGVAERWDLVAWGVELGTAYTELTDPVEQRKRLTEQSILAAGGDSEAMEIDED- 1087

Query: 522  FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                  A +  MPP GG+  G+DRIVML+ G +++RE   FP+++
Sbjct: 1088 ---FLTALEYAMPPTGGLGLGVDRIVMLITG-QSIRESLAFPLAK 1128


>gi|317485967|ref|ZP_07944822.1| asparaginyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316922740|gb|EFV43971.1| asparaginyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 460

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/253 (19%), Positives = 102/253 (40%), Gaps = 25/253 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           +R+ GWV   R   G  FL++ D    G  Q + +  +A ++  + V +       G  +
Sbjct: 19  IRIGGWVRTRRDAKGFSFLELNDGSCLGNIQCIVDEGTAAWDKLEGVNT-------GACV 71

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           + + E + +     + E+ A+ + +  +A+    P+  +R   E +R     L  R +  
Sbjct: 72  AVTGELVESPGKGQKWEVRAKDMTVFGLADPETFPLQKKRHSDEFLR-TIAHLRSRTNKY 130

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                 R    +++        F    TPILT S  EGA +    + +   +     + P
Sbjct: 131 GAAFRIRAEAAHAVHDFFYQNGFYYVHTPILTGSDCEGAGEMFRVTTLPLNTPVKPGENP 190

Query: 199 Q---------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                           Q +   +A G  + +   P FR E+  + R   EF+ ++ E++F
Sbjct: 191 YAQDFFGKECSLTVSGQLEAEALALGLGKVYTFGPTFRAENSNTPRHAAEFWMIEPEVAF 250

Query: 244 VEQDDILNTMENV 256
            + +D ++  E++
Sbjct: 251 TDINDNMDLAESL 263


>gi|149196138|ref|ZP_01873194.1| asparaginyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149140985|gb|EDM29382.1| asparaginyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 459

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 31/273 (11%)

Query: 11  DLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRS 67
           +L  S VG  + L+GW+   R   GG  FL+I D   +   QV+A+ +   ++  KS+ +
Sbjct: 6   ELDKSKVGESISLAGWLRTKRDSKGGFSFLEINDGSSFKGIQVIADQNLDNYDDVKSLHT 65

Query: 68  EWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              L + G ++    +        GQ  EL A+ I I    ++  L   G   + E++R 
Sbjct: 66  GASLKLTGKLVESPGK--------GQSFELQAESILIYGNTDQSYLLQKGRINF-ETLR- 115

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           +   L  R +++   +  R ++  +        +F+   TPI+TAS  EGA      + +
Sbjct: 116 ESAHLRCRTNSIGAVMRVRNQLSKATHDFFQNRHFLNLHTPIITASDCEGAGQMFQVTTL 175

Query: 187 N--------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDR 229
           +              +  F+          QL     A G  R +   P FR E+  + R
Sbjct: 176 DMDKPPKNDLNKVDYKKDFFGKKTHLTVSGQLNGETYACGLGRIYTFGPTFRAENSNTSR 235

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
              EF+ ++ E +F E ++  +   + L+  F+
Sbjct: 236 HLSEFWMVEPEAAFFELEENADLARDYLKYCFK 268


>gi|110801719|ref|YP_699756.1| asparaginyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|122956479|sp|Q0SQ51|SYN_CLOPS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|110682220|gb|ABG85590.1| asparaginyl-tRNA synthetase [Clostridium perfringens SM101]
          Length = 465

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 121/325 (37%), Gaps = 64/325 (19%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V++SGW+  +R      F+++ D      V    DSA     K         I  L +S 
Sbjct: 22  VKISGWIRTLRASNAFGFIEVNDGSFFKNVQVVFDSAKISNYKE--------ISKLPISS 73

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-ESIRFKYRFLDLRRDTLH 139
           S   I   + T     S Q  EI   AEE+ +    + +YP +  R  + +L   R   H
Sbjct: 74  SISVIGTLVETPD---SKQPFEIQ--AEEIIVEGMSDSDYPLQKKRHTFEYL---RTIAH 125

Query: 140 ----KNIVKRTRIINSMRCRMIA-----ENFIECSTPILTASSPEGA--------RDFLV 182
                N    T  + S+    I      + F+   TPILT S  EGA         D + 
Sbjct: 126 LRPRSNAFSATFRVRSVAAYAIHKFFQDQGFVYTHTPILTGSDCEGAGEMFRVTTLDMMA 185

Query: 183 PSRVNQG------SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           P    +G       F+          QL     A  F   +   P FR E+  + +   E
Sbjct: 186 PPISEEGGIDFSQDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSNTVKHAAE 245

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSN 272
           F+ ++ EM+F +  D +   EN+L+ V              F +F +        + V++
Sbjct: 246 FWMIEPEMAFADLIDDMEVAENMLKYVIKYVMDECPEEIAFFNQFVDKGLLERLNHVVNS 305

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPI 297
            F ++ Y +A++       +   P+
Sbjct: 306 EFGKVTYTEAVKLLQESGKEFEYPV 330


>gi|21242368|ref|NP_641950.1| asparaginyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|24212402|sp|Q8PM16|SYN_XANAC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|21107804|gb|AAM36486.1| asparaginyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 464

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 107/270 (39%), Gaps = 40/270 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D   +   QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           +++    +        GQ  E+ A  ++++   E+ L  P+  +   PE +R       L
Sbjct: 77  VLVKSQGK--------GQSFEIQASGVDVVGWVEDPLTYPIQPKPMTPEFLR---EVAHL 125

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R R  L   + +    +     R   +N F   STPI+T S  EGA       RV+    
Sbjct: 126 RPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMF---RVSTLDM 182

Query: 192 YALPQAPQQY----------KQLLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
             LP+               +  L  SG            + +   P FR E+  + R  
Sbjct: 183 VNLPRDASGAVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHL 242

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            EF+ ++ E++F +  +     E  L+ +F
Sbjct: 243 AEFWMIEPEIAFADLAEDARLAEQFLKYLF 272


>gi|320329577|gb|EFW85566.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
 gi|330878327|gb|EGH12476.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
          Length = 500

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 20/263 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E    V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLAEETLAEVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTTVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L T      A+ F           + L  AP+ Y + L+  GF++ F+
Sbjct: 194 MKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRYGTD 289
           V      F+R+   D+I +Y  D
Sbjct: 312 VFHFGEPFVRLSVFDSILKYNPD 334



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 408 RFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTDSPSIRDVILFP 494


>gi|209694860|ref|YP_002262788.1| asparaginyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|208008811|emb|CAQ79014.1| asparaginyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 466

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 126/318 (39%), Gaps = 65/318 (20%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV-------RSE 68
           V S V + GW+   R    GI FL I D             +CF+  ++V        +E
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNDLNNYNE 63

Query: 69  WVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
            VL +          TI A+   GQ  EL+A  ++++ + E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGTIVASPAKGQDFELAATAVKVVGLVEDPDTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + ++  S P++T+S  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYLWMSAPLITSSDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     +    Y +        L  SG            + +   P FR E+  +
Sbjct: 181 TLDHANVPLDDKGNVDYDKDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSHT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT-------- 269
            R   EF+ ++ E++F + DD+    E++L+ VFE          EF             
Sbjct: 241 SRHLAEFWMVEPEVAFADLDDVAKLAEDMLKYVFEAVLAERRDDLEFFASRIDKEAITRL 300

Query: 270 ---VSNNFLRICYDDAIR 284
              VS++F ++ Y DAI+
Sbjct: 301 EQFVSSDFAQVDYTDAIQ 318


>gi|15605514|ref|NP_220300.1| lysyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76789523|ref|YP_328609.1| lysyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237803211|ref|YP_002888405.1| lysyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|237805132|ref|YP_002889286.1| lysyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|6226185|sp|O84786|SYK_CHLTR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123606590|sp|Q3KKR1|SYK_CHLTA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|3329245|gb|AAC68376.1| Lysyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76168053|gb|AAX51061.1| lysyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273432|emb|CAX10347.1| lysyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274445|emb|CAX11240.1| lysyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 526

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 4/150 (2%)

Query: 122 ESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           + IR++ R+ DL   + + K  + R+RI+  +R  M  ++F+E  TPIL T      A  
Sbjct: 171 KEIRYRKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQTIYGGAEATP 230

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+   +      +         K+LL+  G  R ++I   FR+E       P EF  ++ 
Sbjct: 231 FVTTLQALHAEMFLRISLEIALKKLLVG-GMSRVYEIGKVFRNEGIDRTHNP-EFTMIEA 288

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
             ++ + +D++  +EN++  +    +NG T
Sbjct: 289 YAAYWDYNDVMKCVENLVEYIVRALNNGET 318



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 24/33 (72%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP GG   GIDR+VM+L  A ++R+V  FP+
Sbjct: 485 GMPPAGGFGIGIDRLVMMLTDAASIRDVLFFPV 517


>gi|307721320|ref|YP_003892460.1| lysyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306979413|gb|ADN09448.1| lysyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 506

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 113/262 (43%), Gaps = 11/262 (4%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           +SG +  +R  G   F+ I D  G+ Q+  + D+       ++  + +   D +      
Sbjct: 61  VSGRIKFLRIMGKASFVKIEDESGMLQIYVSRDNLPEGFYNTIFKKNIEVGDII------ 114

Query: 83  ETINANIITGQIELS--AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LH 139
           E      +TGQ ELS  A   ++L+ A   PLP        + IR++ R+LDL  ++ + 
Sbjct: 115 EVGGFPFVTGQGELSLHADSFKLLTKAI-APLPEKFHGITDKEIRYRKRYLDLIMNSEVR 173

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           K    R+R+I+  R     + F+E  TP++   +        V      G    L  AP+
Sbjct: 174 KTFQIRSRVISLTRRFFEDKGFLEVETPMMHPIAGGANAKPFVTHHNALGVDRYLRIAPE 233

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E   +   P EF  ++   ++    D++   +   + 
Sbjct: 234 LYLKRLIVGGFEAVFEINRNFRNEGMDATHNP-EFTSIEFYWAYKTYKDLIEITKEYFQY 292

Query: 260 VFEEFSNGNTVSNNFLRICYDD 281
           +FE       +    L + +D+
Sbjct: 293 LFEHLDLPTLLPYGDLEVNFDN 314



 Score = 40.4 bits (93), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GM P  G   GIDR+VMLL    ++R+V LFP
Sbjct: 454 ALSYGMAPTAGQGIGIDRLVMLLTNEHSIRDVLLFP 489


>gi|104780460|ref|YP_606958.1| lysyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|123079246|sp|Q1IDW1|SYK_PSEE4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|95109447|emb|CAK14148.1| lysyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 500

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 120/261 (45%), Gaps = 22/261 (8%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   +   +V++ W L   G ++S  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLSEDTLAAVKT-WDL---GDIIS--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCR 155
              + +L+ +   PLP           R++ R++DL    +T H   V R+++I+ +R  
Sbjct: 135 MTNVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRV-RSQVISHIRKF 192

Query: 156 MIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           +I  +F+E  TP+L T      A+ F         + + L  AP+ Y + L+  GF++ F
Sbjct: 193 LIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMF-LRIAPELYLKRLVVGGFEKVF 251

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGN 268
           +I   FR+E   +   P EF  L+   ++ +  D ++  E + R + +      +   G+
Sbjct: 252 EINRNFRNEGVSTRHNP-EFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGSTDVPYGD 310

Query: 269 TV---SNNFLRICYDDAIRRY 286
            V      F+R+   D+I +Y
Sbjct: 311 KVFHFGEPFVRLSVFDSILKY 331



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 458 RALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFP 494


>gi|148827002|ref|YP_001291755.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166231667|sp|A5UF16|SYN_HAEIG RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148718244|gb|ABQ99371.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 467

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 111/275 (40%), Gaps = 38/275 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE 
Sbjct: 13  GKVAIGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYE------SEI 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           +    G  +  + + + +      +EL A+K+E+    E+    P+  +R    SI +  
Sbjct: 67  LRLTTGCSVIVTGKVVESPAEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLR 123

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV
Sbjct: 124 EVAHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RV 180

Query: 187 NQGSFYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPR 226
           +      LP++        Q +   +  L  SG            + +   P FR E+  
Sbjct: 181 STLDLENLPRSENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 240

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ ++ E++F    D     E++L+ VF
Sbjct: 241 TTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVF 275


>gi|29349281|ref|NP_812784.1| asparaginyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253570373|ref|ZP_04847782.1| asparaginyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298384819|ref|ZP_06994378.1| asparagine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|38258349|sp|Q8A0Z8|SYN_BACTN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|29341189|gb|AAO78978.1| asparaginyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251840754|gb|EES68836.1| asparaginyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298261963|gb|EFI04828.1| asparagine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 467

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 115/277 (41%), Gaps = 36/277 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L   D+G+ V + GWV   R    + F+ + D   I  V    D A F  E+ 
Sbjct: 6   RTKIVDLLKREDIGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLANFDEEML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREY 120
           K + +   + ++G+++         ++ +GQ +E+ A++IE+L   +   PL   G    
Sbjct: 66  KLITTGACISVNGVMVE--------SVGSGQKVEVQAKEIEVLGTCDNTYPLQKKGH--- 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGAR 178
             S+ F      LR  T     V R R  +  ++      + F    TPI+T S  EGA 
Sbjct: 115 --SMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITGSDCEGAG 172

Query: 179 DFLVPSRVN--------QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221
                + +N        +GS      F+    +     QL   L A+     +   P FR
Sbjct: 173 QMFQVTTMNLYDLKKDERGSISYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            E+  + R   EF+ ++ E++F +  D ++  E  ++
Sbjct: 233 AENSNTPRHLAEFWMIEPEVAFNDIADNMDLAEEFIK 269


>gi|320323151|gb|EFW79240.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. B076]
          Length = 500

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 20/263 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E    V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLAEETLAEVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTTVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L T      A+ F           + L  AP+ Y + L+  GF++ F+
Sbjct: 194 MKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRYGTD 289
           V      F+R+   D+I +Y  D
Sbjct: 312 VFHFGEPFVRLSVFDSILKYNPD 334



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 458 RALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFP 494


>gi|297748909|gb|ADI51455.1| Lysyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749789|gb|ADI52467.1| Lysyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 527

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 4/150 (2%)

Query: 122 ESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           + IR++ R+ DL   + + K  + R+RI+  +R  M  ++F+E  TPIL T      A  
Sbjct: 172 KEIRYRKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQTIYGGAEATP 231

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+   +      +         K+LL+  G  R ++I   FR+E       P EF  ++ 
Sbjct: 232 FVTTLQALHAEMFLRISLEIALKKLLVG-GMSRVYEIGKVFRNEGIDRTHNP-EFTMIEA 289

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
             ++ + +D++  +EN++  +    +NG T
Sbjct: 290 YAAYWDYNDVMKCVENLVEYIVRALNNGET 319



 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 24/33 (72%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP GG   GIDR+VM+L  A ++R+V  FP+
Sbjct: 486 GMPPAGGFGIGIDRLVMMLTDAASIRDVLFFPV 518


>gi|238757642|ref|ZP_04618826.1| Asparaginyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238704147|gb|EEP96680.1| Asparaginyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 466

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 118/302 (39%), Gaps = 43/302 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV------- 65
           G + V S V + GWV R R          RD       VA  D +CF+  ++V       
Sbjct: 12  GRAAVDSEVTVRGWV-RTR----------RDSKAGISFVAVYDGSCFDPLQAVVNNSLPN 60

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILS-VAEELPLPVFGEREYPES 123
             + VL +          T+ A+   GQ  E+ A  I+++  V +    P+  +R    S
Sbjct: 61  YQDEVLHLTTGCSVEVTGTVVASPGEGQSFEIQATAIKVVGWVDDPDTYPMAAKRH---S 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181
           I +      LR  T     V R R  +     R   EN +   STP++TAS  EGA +  
Sbjct: 118 IEYLREVAHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMF 177

Query: 182 VPS--------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             S        R + G+      F+   A      Q      AS   + +   P FR E+
Sbjct: 178 RVSTLDLENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYASALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD-DAI 283
             + R   EF+ ++ E++F   DD+    E +L+ VF+   N       F     D DA+
Sbjct: 238 SNTSRHLAEFWMVEPEVAFASLDDVAALAEKMLKYVFQAVLNERADDMKFFAERVDKDAV 297

Query: 284 RR 285
            R
Sbjct: 298 DR 299



 Score = 37.4 bits (85), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLISYVTGVQNVRDVIPFPRT 460


>gi|301614211|ref|XP_002936592.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           [Xenopus (Silurana) tropicalis]
          Length = 454

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 23/187 (12%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGL 76
           + V+L GWV  VR    ++FL I D   +   Q+VA PD     +  SV     + + G+
Sbjct: 45  AVVKLQGWVRSVRAQKEVLFLHINDGSSMENLQIVAEPD-----LKNSVSFGSSVEVQGM 99

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFKYRFLDLRR 135
           ++    +  N       +EL A+ I I+   + +  P    ER  PE +R ++  L  R 
Sbjct: 100 LVKSLHKKQN-------VELKAEGIRIIGPCDSVDFPFKLKERHSPEYVR-QFPHLRCRT 151

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL-------VPSRVNQ 188
            T    +  R+    +++       +    TPI+T++  EGA +          P+   +
Sbjct: 152 PTFSSLLRIRSEATAAIQEFFKTNGYTHIHTPIITSNDCEGAGELFKVEAANKSPAAGEE 211

Query: 189 GSFYALP 195
            SF+ +P
Sbjct: 212 SSFFGVP 218



 Score = 40.4 bits (93), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 6/90 (6%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  E+  G +R    +++ Q    +G+     ++ +       Q G  PHGG   
Sbjct: 370 DLLVPGIGELFGGSLREERPQLLQQRLDRLGL-----KDTYQWYLDLRQFGSVPHGGFGM 424

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R +  +LG +N+++V  FP   + C L
Sbjct: 425 GFERYLQCILGVENIKDVIPFPRFSHSCLL 454


>gi|207743625|ref|YP_002260017.1| lysyl-trna synthetase (partial sequence) protein [Ralstonia
           solanacearum IPO1609]
 gi|206595024|emb|CAQ61951.1| probable lysyl-trna synthetase (partial sequence) protein
           [Ralstonia solanacearum IPO1609]
          Length = 234

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E   + F      K+  +     +   Y RA + GMPP 
Sbjct: 142 RFELFITGREIANGFSELNDPEDQAERFRKQVEQKDAGDEEAMYYDADYIRALEYGMPPT 201

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + N+R+V LFP
Sbjct: 202 GGCGIGIDRLVMLLTDSPNIRDVILFP 228


>gi|296436331|gb|ADH18505.1| lysyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296438190|gb|ADH20351.1| lysyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140691|gb|ADH97449.1| lysyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 526

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 4/150 (2%)

Query: 122 ESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           + IR++ R+ DL   + + K  + R+RI+  +R  M  ++F+E  TPIL T      A  
Sbjct: 171 KEIRYRKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQTIYGGAEATP 230

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+   +      +         K+LL+  G  R ++I   FR+E       P EF  ++ 
Sbjct: 231 FVTTLQALHAEMFLRISLEIALKKLLVG-GMSRVYEIGKVFRNEGIDRTHNP-EFTMIEA 288

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
             ++ + +D++  +EN++  +    +NG T
Sbjct: 289 YAAYWDYNDVMKCVENLVEYIVRALNNGET 318



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 24/33 (72%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP GG   GIDR+VM+L  A ++R+V  FP+
Sbjct: 485 GMPPAGGFGIGIDRLVMMLTDAASIRDVLFFPV 517


>gi|331214131|ref|XP_003319747.1| asparaginyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309298737|gb|EFP75328.1| asparaginyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 577

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/323 (22%), Positives = 127/323 (39%), Gaps = 80/323 (24%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGIT----QVVANP-DSACFEIAKSVRSEWVLCID 74
            V   GW+  +R    + F+++ D  G T    QVV  P DS   E   ++R        
Sbjct: 131 LVTACGWIKTIRKQKNVSFVELID--GSTPHHLQVVVGPKDSEELETGCAIR-----VTG 183

Query: 75  GLVMSRSAETINANIITGQI-ELSAQKIEILS--VAEELPLPVFGEREYPESIRFKYRFL 131
            LV+SR           GQ  EL A+ + ++   +A E PL     ++      F  R  
Sbjct: 184 NLVLSRG---------NGQSKELKARSVNLVGPCLALEYPL-----QKKTHGAAFLRRIP 229

Query: 132 DLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV------- 182
            LR  T   + + R R  +I      + A++F    TPI+T +  EGA +          
Sbjct: 230 HLRVRTHETSALMRIRSTMIQEASSFLHAQHFFRSETPIITFNDCEGAGEVFSVRPDSQS 289

Query: 183 ------PSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPC 219
                 P  +++    + P++   ++         L  SG            R +   P 
Sbjct: 290 KSSLQPPITISEKVPNSAPESAASHESRFFGREAFLTVSGQLHLEALSASLGRVYSFGPA 349

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNG----------- 267
           FR E  +++R   EF+ L+ E+SF+E  + ++  +EN+++ + +                
Sbjct: 350 FRAERSQTNRHLAEFWMLEAELSFIEDLESLIVLLENLIKSIIQNLHQSDSLSSLDLQSL 409

Query: 268 -------NTVSNNFLRICYDDAI 283
                  N+ S ++ RI Y +A+
Sbjct: 410 RAPKEPYNSTSKSWPRITYTEAV 432


>gi|170596103|ref|XP_001902642.1| Asparaginyl-tRNA synthetase [Brugia malayi]
 gi|158589572|gb|EDP28510.1| Asparaginyl-tRNA synthetase, putative [Brugia malayi]
          Length = 444

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 115/298 (38%), Gaps = 54/298 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEI----AKSVRSEWVLCID 74
           +R+ GW  RV   G  +FL + D   +   Q V   D  C ++    A  +  +WV+   
Sbjct: 28  IRIQGWARRVETRGKFLFLHVSDGCSLKTIQAVVQRD-ICPKVPVGSAVDIVGDWVM--- 83

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
                       +N     +EL A   E++ + ++    +  E    +  R KY  L ++
Sbjct: 84  ------------SNGKQQGMELFATNCEVVGLQQKSFSELPTEESCADVTRRKYH-LRMK 130

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF--- 191
                  +  R+R+    R     E F    TP+LT +  EGA D  +     Q  F   
Sbjct: 131 SIPFMCLLRLRSRLDQLSRSFFQKELFFHVDTPLLTHNDCEGAGDIFIVQADKQNYFGDQ 190

Query: 192 -YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ---- 246
              LP + Q + +  + S   + + IAP  R +  ++ +   EF  L+ E +F +     
Sbjct: 191 AVYLPVSSQLHLESFVGS-LSKVYTIAPALRADHSQTRQHLAEFRMLEAEYAFADDLEQL 249

Query: 247 ------------DDILNTMENVLRGVFEEFSNGNTVSNN----------FLRICYDDA 282
                       D +L+     ++ + + F +GN    +          FLRI YD+A
Sbjct: 250 CDLVERYVNYVIDGMLSYDVKEIKSMMQVFCSGNAEVQSLLWTNGSRKPFLRIQYDEA 307


>gi|156060031|ref|XP_001595938.1| hypothetical protein SS1G_02152 [Sclerotinia sclerotiorum 1980]
 gi|154699562|gb|EDN99300.1| hypothetical protein SS1G_02152 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 610

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/270 (21%), Positives = 125/270 (46%), Gaps = 16/270 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV-----ANPDSACFEIA-KSV 65
           G  D    +R+   ++  R  G  ++F D++      QV+     +   +  FE   + +
Sbjct: 118 GEHDKNVEIRVGARIYNKRASGNKLVFYDVKTRDTKIQVMCQLQESREGALAFEKQHEPL 177

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESI 124
           R   V+ I G     + ++       G++ + A +I +L+   ++LP   +G +++ +  
Sbjct: 178 RRGDVIGIVGYPGRTAPKSKIEKGEEGELSIFATEIILLTPCVQQLPDEYYGFKDHEK-- 235

Query: 125 RFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182
           R + R+LDL   D+  K +  R++++  +R      +F E  TP++ + +    A+ F  
Sbjct: 236 RHRQRYLDLIMNDSSRKVLKTRSKMVRYIRNYFDDRDFDEVETPMMNSIAGGATAKPFKT 295

Query: 183 P-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
             + +N   F  +  AP+ Y ++L+  G DR +++   FR+E       P EF   +  M
Sbjct: 296 HHNDLNMDMFMRI--APELYLKMLVVGGMDRVYEMGRQFRNEGIDLTHNP-EFTTCEFYM 352

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           ++ +  D ++  E ++ G+ +  + G T  
Sbjct: 353 AYADVYDTMDMTEELVSGLVKHITGGTTTK 382



 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 25/41 (60%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           RA + G+PP  G   GIDR+VM L    +++EV  FP  ++
Sbjct: 543 RALEFGLPPTAGWGMGIDRLVMFLTDNYSIKEVLTFPFMKD 583


>gi|139438543|ref|ZP_01772059.1| Hypothetical protein COLAER_01057 [Collinsella aerofaciens ATCC
           25986]
 gi|133776082|gb|EBA39902.1| Hypothetical protein COLAER_01057 [Collinsella aerofaciens ATCC
           25986]
          Length = 471

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 108/269 (40%), Gaps = 35/269 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSA--CFEIAKSVRSEWVLCI 73
           G  V ++GW+  VR      F+ + D   +   QVV N ++     EIA    S  ++C 
Sbjct: 22  GQTVTVAGWIKSVRDMKNFGFVTLNDGSCFRDLQVVMNREALDNYDEIAHQNVSAALICT 81

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             + ++  A            ELSA  IE+  V+     P+  +R   E +R +     L
Sbjct: 82  GTVKLTPDAPQ--------PFELSATSIEVEGVSAP-DYPLQKKRATVEFLRTQQH---L 129

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV--------P 183
           R R  L + + +   +  +   R   E  F+  +TPI+T S  EGA +           P
Sbjct: 130 RPRTNLFRAVFRIRSVAAAAIHRFFQEQGFVYVNTPIITTSDCEGAGEMFRVTTLDPKNP 189

Query: 184 SRVNQGSF---------YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                G           +A      Q      A  F   +   P FR E+  + R   EF
Sbjct: 190 PLTESGEVDWSQDFFGKHASLTVSGQLNAENFAMAFGDVYTFGPTFRAENSNTTRHAAEF 249

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           + ++ EM+F + +D ++  E +L+ V ++
Sbjct: 250 WMIEPEMAFADLNDYMDNAEAMLKYVLKD 278


>gi|295676933|ref|YP_003605457.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295436776|gb|ADG15946.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 518

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 129/306 (42%), Gaps = 28/306 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  +RD  G  Q    P     E   + + +W +    +V +R
Sbjct: 78  VAIAGRMMLKRVMGKASFATVRDGSGQIQFFITPADVGQETYDAFK-KWDMG--DIVAAR 134

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-RRDTL 138
                     T + ELS +  E+  +++ L PLP        + ++++ R++DL      
Sbjct: 135 GV-----LFRTNKGELSVRCTELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVTPET 189

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA-LPQA 197
            +  V RT+ I+S+R  M   NF+E  TP+L    P GA      +  N       L  A
Sbjct: 190 RRTFVARTKAISSIRKYMADANFMEVETPMLH-PIPGGAAAKPFSTHHNALDMQMFLRIA 248

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E ++
Sbjct: 249 PELYLKRLVVGGFERVFEINRNFRNEG-VSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLI 307

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           R    +     T+         S  F R+    AI++Y    P   N  +       F+ 
Sbjct: 308 RQAAIDALGTATITYQGRELDLSKPFHRLTITQAIQKYA---PQYTNEQLADTT---FLR 361

Query: 309 SEFRVF 314
           +E + F
Sbjct: 362 AELKKF 367



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     +   Y RA + GMPP 
Sbjct: 426 RFELFITGREIANGFSELNDPEDQAARFKKQVDQKDAGDEEAMFYDADYIRALEYGMPPA 485

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VM+L  + ++R+V LFP
Sbjct: 486 GGCGIGIDRLVMMLTDSPSIRDVILFP 512


>gi|262037915|ref|ZP_06011340.1| asparagine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261748058|gb|EEY35472.1| asparagine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 462

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 107/264 (40%), Gaps = 38/264 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD---HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           + L+GW+ ++R      F+++ D     GI  V+ +      EI+K   S  +     LV
Sbjct: 20  IELNGWIKKIRSQKNFGFIELNDGTFFNGIQIVIDDTLPNFEEISKLTISSSIKVYGKLV 79

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            S            GQ  E+ A K+E+   ++    P+  +R   E +R     L  R +
Sbjct: 80  KSEGK---------GQDYEIKADKVEVYDKSDS-DYPLQNKRHTFEFLR-TIAHLRPRTN 128

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T       R+ +  ++      +NF+   TPI+T S  EGA +     R+       LP+
Sbjct: 129 TFFAVFRVRSILAYAIHKFFQEKNFVYVQTPIITGSDAEGAGEMF---RLTTLDLEKLPR 185

Query: 197 APQ---QYKQLLMA-----------------SGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +    +KQ                     + F   +   P FR E+  + +   EF+ 
Sbjct: 186 TEKGDIDFKQDFFGKESNLTVSGQLNVETFCTAFKNTYTFGPTFRAENSNTPKHAAEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGV 260
           ++ E++F + D  ++ +E +++ +
Sbjct: 246 MEPEIAFADLDVNMDVIEEMIKYI 269



 Score = 43.9 bits (102), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G  R    +V+L   + +G++    E  +       + G  PH G   
Sbjct: 377 DLLAPGIGEIVGGSQREDNYDVLLDKINQMGLN----EQDYWWYLDLRKYGSVPHSGFGL 432

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G DRI+M + G  N+R+V  FP +
Sbjct: 433 GFDRILMYITGMTNIRDVIPFPRT 456


>gi|238897703|ref|YP_002923382.1| putative lysyl-tRNA synthetase with Class II aaRS and biotin
           synthetase domains [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259511523|sp|C4K3U1|SYK3_HAMD5 RecName: Full=Uncharacterized protein YjeA
 gi|229465460|gb|ACQ67234.1| putative lysyl-tRNA synthetase with Class II aaRS and biotin
           synthetase domains [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 325

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 12/115 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------V 511
           F   Q  + S+   D    + F+  +   G E+A+G      S    Q F         +
Sbjct: 215 FPASQAALASISTEDYRVAERFE--VYFKGIELANGFYELTDSAEQQQRFEQDNRQRAAL 272

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+ K  ++ RF     A + G+PP  G+A GIDR+VML + A+N+ EV  FP+ +
Sbjct: 273 GLPKRSIDERFIA---ALKHGLPPCSGVALGIDRLVMLSVNAENLSEVMAFPVER 324



 Score = 37.7 bits (86), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 7/90 (7%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR------DFLVPSRVNQGSFYAL 194
           N++KR  +I  +R        +E  TP ++ ++            FL P+     S Y +
Sbjct: 15  NLLKRADMIKKIRQFFTDRGVLEVDTPCMSQATVTDVHLSTFETRFLAPTMAKSLSLY-M 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             +P+ + + L+A+G    +Q+  CFR+E+
Sbjct: 74  TTSPEYHMKRLLAAGSGPIYQMGRCFRNEE 103


>gi|238792377|ref|ZP_04636011.1| Asparaginyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238728303|gb|EEQ19823.1| Asparaginyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 466

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 118/302 (39%), Gaps = 43/302 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV------- 65
           G + V S V + GWV R R          RD       VA  D +CF+  ++V       
Sbjct: 12  GRAAVDSEVTVRGWV-RTR----------RDSKAGISFVAVYDGSCFDPLQAVVNNTLPN 60

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILS-VAEELPLPVFGEREYPES 123
             + VL +          T+ A+   GQ  E+ A  I+++  V +    P+  +R    S
Sbjct: 61  YQDEVLHLTTGCSVEVTGTVVASPGEGQSFEIQATAIKVVGWVDDPDTYPMAAKRH---S 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181
           I +      LR  T     V R R  +     R   EN +   STP++TAS  EGA +  
Sbjct: 118 IEYLREVAHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMF 177

Query: 182 VPS--------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             S        R + G+      F+   A      Q      AS   + +   P FR E+
Sbjct: 178 RVSTLDLENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYASALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD-DAI 283
             + R   EF+ ++ E++F   DD+    E +L+ VF+   N       F     D DA+
Sbjct: 238 SNTSRHLAEFWMVEPEVAFASLDDVAALAEKMLKYVFQAVLNERADDMKFFAERVDKDAV 297

Query: 284 RR 285
            R
Sbjct: 298 DR 299



 Score = 37.4 bits (85), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLISYVTGVQNVRDVIPFPRT 460


>gi|119476450|ref|ZP_01616801.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119450314|gb|EAW31549.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 503

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 30/245 (12%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIIN 150
           G + +    +E+L+ +   PLP        + +R++ R++DL      +++ K R+++I+
Sbjct: 122 GDLYVYMDSVELLTKSLR-PLPDKFHGLQDQEMRYRQRYVDLIVSDESRDVFKLRSKMIS 180

Query: 151 SMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            MR  +   +F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  
Sbjct: 181 FMRRYLDNADFMEVETPMMQVI-PGGATARPFVTHHNSLDMDMY-LRVAPELYLKRLVVG 238

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG- 267
           GF+R ++I   FR+E   S R   EF  L+   S+ +  ++++  E++LR + +      
Sbjct: 239 GFERVYEINRNFRNEG-LSTRHNPEFTMLEFYQSYADYKELMDLTEDMLREMAKALLGTT 297

Query: 268 ---NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
              NTV N    I  +   + Y     DL  P            +   VF  IL  NP  
Sbjct: 298 ILLNTVKNEDGEIVQE---KHY-----DLSQPF-----------TRISVFDSILHFNPDI 338

Query: 325 EVWAI 329
              A+
Sbjct: 339 SAEAL 343



 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   + ++R+V LFP
Sbjct: 462 ALEYGLPPTAGEGIGIDRLVMLFSDSPSIRDVLLFP 497


>gi|293376909|ref|ZP_06623126.1| lysine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325838530|ref|ZP_08166552.1| lysine--tRNA ligase [Turicibacter sp. HGF1]
 gi|292644455|gb|EFF62548.1| lysine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325490825|gb|EGC93127.1| lysine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 495

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/283 (22%), Positives = 116/283 (40%), Gaps = 31/283 (10%)

Query: 5   RTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RTH    L V + G F           V ++G +   R  G   F  I+D  G  Q+   
Sbjct: 34  RTHLSSQL-VEEFGEFSKEELEEKNIEVAIAGRIRTKRGKGKAGFAHIQDIKGQVQIYVR 92

Query: 54  PDSA---CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EE 109
            D+     +          ++ + G+V              G++ +  ++   L+ A   
Sbjct: 93  QDAVGEEAYAFFDKADLGDIVGVRGVVFKTKV---------GELSIKVKEYTPLTKALRP 143

Query: 110 LPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
           LP    G  +  E  R++ R++DL   +   +  + RTRII +MR  +    ++E  TPI
Sbjct: 144 LPEKYHGLTDVEE--RYRRRYVDLIMNEESKQTFITRTRIITAMRRYLDNLGYLEVETPI 201

Query: 169 L-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L T      AR F           Y L  A + + + L+  G ++ ++I   FR+E    
Sbjct: 202 LHTTLGGAAARPFETHHNALDMPLY-LRIATELHLKRLLVGGLEKVYEIGRIFRNEGISV 260

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
              P EF  +++  ++ + + +++  EN++  + +E     TV
Sbjct: 261 RHNP-EFTSIELYEAYGDMETMMDLTENMIASIAQEVLGTTTV 302



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 455 ALEYGMPPAGGLGIGIDRLVMLLTNSPSIRDVLLFP 490


>gi|255571572|ref|XP_002526732.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223533921|gb|EEF35646.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 78

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 1/44 (2%)

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           P +  Q LM SGFD+Y+QIA CFRD+D R+D  P E   LDM +
Sbjct: 30  PGEGVQTLMVSGFDKYYQIARCFRDQDLRADTQP-ELTWLDMNL 72


>gi|146421671|ref|XP_001486780.1| hypothetical protein PGUG_00157 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 544

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 114/255 (44%), Gaps = 13/255 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK-SVRSEWVLCIDGLVMS 79
           ++ G +  VR  G GI FLD+       Q++A+       +        ++   D +V  
Sbjct: 85  KIEGRISLVRRSGRGIYFLDLVQDDEKVQLMAHHKLMELSVDDFDQHHSFLRSGDYVVAV 144

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTL 138
               T N   +T ++      IE++S    L L    E+    S+  K R LD +    L
Sbjct: 145 GFPSTTNVGELTLKLNCP---IELVSPC--LNLTTIPEKLSDRSLINKNRVLDYIVSPEL 199

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPIL----TASSPEGARDFLVPSRVNQGSFYAL 194
            +++V R+ +I ++R   +   F+E  TP+L    T ++ +  +  L    + +    +L
Sbjct: 200 REHMVIRSLVIQAIRSFFLQRQFLEVQTPLLAGNGTGANAQPFKTALRALGLLEEESLSL 259

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ + + L+ SGFD+ F+I P FR+E   +   P EFY  +    F+  ++++   +
Sbjct: 260 RVAPELWLKRLVISGFDKVFEIGPSFRNEGVDATHNP-EFYTCEFYQLFLSLEELMEITQ 318

Query: 255 NVLRGVFEEFSNGNT 269
           ++   +    S   T
Sbjct: 319 DLFAHIHSSLSTHRT 333



 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           R  + G+PP GG   GIDR+VML  GA  + +V  F
Sbjct: 500 RVMEYGLPPTGGWGCGIDRLVMLFSGASRISQVLPF 535


>gi|82596159|ref|XP_726146.1| lysyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23481432|gb|EAA17711.1| lysyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 644

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 31/222 (13%)

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR--FLD-LRRDTLHKNIVKRT 146
           + G++ L  + I IL+ A  LPLP   + +  + I +KYR  +LD L  +   + I+ R 
Sbjct: 234 LRGELTLHTKNIYILTKAL-LPLP--DKHKGMKDIEYKYRKRYLDFLTNNEQKEKIITRF 290

Query: 147 RIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
            II  +R  ++ + ++E  TP+L   +    A+ F    +      Y L  AP+ + + L
Sbjct: 291 NIIQEVRRFLLKKKYLEVDTPMLQLVAGGASAKPFETHLKSLDLVLY-LRIAPELFLKKL 349

Query: 206 MASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           + SG  ++ F+++ CFR+E   +   P EF  L++  S+     ++   + +++ V ++F
Sbjct: 350 IISGISEKIFELSKCFRNEGLSTIHNP-EFTMLEIYKSYANYKYMMKFTKKLIKNVAKKF 408

Query: 265 SNGNTVSN---------------------NFLRICYDDAIRR 285
           S  +  S+                     NFL++ +D A  +
Sbjct: 409 SISSPYSSILQNKWEKKSFIKIIKEYTSINFLKLSFDQAYEK 450



 Score = 40.4 bits (93), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 24/37 (64%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A   G+PP GG+  GIDR+ MLL  + +++ +  FP+
Sbjct: 604 ALAHGLPPTGGLGIGIDRLCMLLTNSSSIKNILPFPI 640


>gi|322692331|gb|EFY84252.1| aspartate-tRNA ligase [Metarhizium acridum CQMa 102]
          Length = 480

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 29/221 (13%)

Query: 57  ACFEIAKSVRSEWVLCIDGLV--MSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           A +  A+ +  E ++ + G V  +  ++ET      T  + ++   ++++++A    LP 
Sbjct: 69  AVWHKAQKLTPESIVRVSGHVQLVHGNSETGGNKAYTTTVHVT--NLDVIALASP-DLPT 125

Query: 115 FGEREYPE---SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-----NFIECST 166
              +E P      R  +R LD+RR +    I K    ++S  C++I E      F    T
Sbjct: 126 VRGKELPGVGLEDRLDHRILDVRR-SASGAIFK----LHSSMCQLIVEFLCSNGFHWIHT 180

Query: 167 P-ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE-- 223
           P I+TA+ P     F +P     G    L Q+ Q +KQ+ ++    R F+I P FR E  
Sbjct: 181 PRIITATIPGDNEYFHLPYF---GKDAWLAQSSQHHKQMALSMDMQRVFEIGPVFRAEVK 237

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDD---ILNTMENVLRGVF 261
             +S R   EF  LD+ M+F  QDD   ++  +E++L  VF
Sbjct: 238 STKSTRHMTEFTVLDIAMAF--QDDYHEVVELIESMLVFVF 276



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 6/90 (6%)

Query: 482 YDLVCNGFEIASGGIR----NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +D +  G EI SG  R    + + E M        +  E    ++     AF+ GMP HG
Sbjct: 389 WDTIVGGREICSGSQRINSYDELCEAMRAGVCGPPLDPEA--EKWQPYLAAFKSGMPRHG 446

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G   G++R++   LG  +VREV+LFP   N
Sbjct: 447 GCGLGVNRLLQGFLGLDDVREVTLFPRDVN 476


>gi|225435776|ref|XP_002285737.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297746486|emb|CBI16542.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/267 (20%), Positives = 117/267 (43%), Gaps = 8/267 (2%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           +V ++G +   R  G + F  +RD  G  Q+    +    E  + +++  V   D L +S
Sbjct: 125 YVSIAGRIVARRAFGKLAFFTLRDDSGTIQLYCEKERLLNEQFEQLKT-LVDIGDILGVS 183

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
            S +        G++ +      +L+ +  LPLP           R++ R++D+  +   
Sbjct: 184 GSIKRTE----KGELSVYVNSFAVLTKSL-LPLPDKYHGLTDVDKRYRQRYVDMIANPEV 238

Query: 140 KNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
            +I  KR +I++++R  + +  F+E  TP+L  ++        V    + G    L  A 
Sbjct: 239 ADIFRKRAKIVSAIRRTVESSGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 298

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + ++  GF++ +++   FR+E   +   P EF  ++M  ++ + + ++N  E ++ 
Sbjct: 299 ELHLKRMLVGGFEKVYEMGRIFRNEGISTRHNP-EFTTIEMYEAYSDYESMMNMAEEIVT 357

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRR 285
                     T+      IC +   RR
Sbjct: 358 QCALAVCGKLTIDYQGTEICLERPWRR 384



 Score = 43.9 bits (102), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  G+DR+VMLL  + ++R+V  FP+
Sbjct: 551 ALEYGMPPASGMGLGVDRLVMLLTNSASIRDVIAFPV 587


>gi|327403364|ref|YP_004344202.1| Lysyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327318872|gb|AEA43364.1| Lysyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 566

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 116/254 (45%), Gaps = 21/254 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE----WVLCI 73
           G  V L+G +   R  G   F +I+D  G  QV  N D  C    K + ++    W+   
Sbjct: 48  GKQVCLAGRLMSQRVMGKASFGEIQDSEGRIQVYFNRDEICPGEDKMLYNDLFKKWLDL- 106

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP-------VFGEREYPESIR 125
            G  +    E     +  G++ ++ ++  +LS + + LP P       V      PE +R
Sbjct: 107 -GDFIGVKGEVFKTQV--GEVSVNVKEFTLLSKSLKPLPTPRTDADGKVHDAFTNPE-LR 162

Query: 126 FKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
           ++ R++DL  +   + + VKRT++ ++MR       ++E  TPIL A      AR F+  
Sbjct: 163 YRQRYVDLVVNPQVREVFVKRTKLFSAMRNFFNDAGYMEVETPILQAIPGGAAARPFITH 222

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +S+
Sbjct: 223 HNALDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVSY 280

Query: 244 VEQDDILNTMENVL 257
            + + +++  E +L
Sbjct: 281 KDYNWMMDFTERLL 294



 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L    +++EV  FP
Sbjct: 458 RALEYGMPPTSGLGIGMDRLIMYLTNNPSIQEVLFFP 494


>gi|160900680|ref|YP_001566262.1| lysyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|160366264|gb|ABX37877.1| lysyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 519

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 124/288 (43%), Gaps = 37/288 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD-----HYGITQVVANPDSACFEIAKSVRSEW----VL 71
           V L G +   R  G   F  I+D      +G  Q+    D+   E+  + +  W    +L
Sbjct: 76  VSLGGRMMLKRVMGKASFATIQDGSLGPTHGRIQLYITRDTVGEEVYAAFKR-WDLGDIL 134

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRF 130
             +G +M            TG++ +  Q + +L+ +   +P    G  +  + +R   R+
Sbjct: 135 GAEGTLMKTK---------TGELSVKVQTLRLLTKSLRPMPDKFHGMADLEQKVR--QRY 183

Query: 131 LDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVN 187
           +DL  D    +  + R++ ++ +R  M+   F+E  TP+L    P GA  + F+      
Sbjct: 184 VDLMMDEQARRRFIARSKAVSGIREFMVEHGFLEVETPMLH-PIPGGANAKPFVTHHNAL 242

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    
Sbjct: 243 DQEMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYR 300

Query: 248 DILNTMENVLR-------GVFEEFSNGNTV--SNNFLRICYDDAIRRY 286
           D+++  E ++R       G  +    G  V  S  F R+   +AI ++
Sbjct: 301 DLMDYTEALVRDAAQKAVGTLQLTYGGKPVDLSQPFQRLTIPEAIVKF 348



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR++MLL  + ++R+V LFP
Sbjct: 477 RALEYGMPPTGGCGIGIDRLMMLLTDSASIRDVILFP 513


>gi|239814417|ref|YP_002943327.1| lysyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|259511538|sp|C5CSG3|SYK_VARPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|239800994|gb|ACS18061.1| lysyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 520

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 121/286 (42%), Gaps = 38/286 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D     Q+    D A  E A +    W L   G ++  
Sbjct: 82  VSVAGRMMLKRVMGKASFATVQDATSRIQLYVTRD-AIGEEAYAEFKRWDL---GDIVG- 136

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLH 139
            AE       TG++ +   K+ +L+ +   PLP        +  +++ R++DL  D T  
Sbjct: 137 -AEGTLMKTKTGELSVKVTKLRLLTKSLR-PLPDKFHGMADQEQKYRQRYVDLITDETAR 194

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY----ALP 195
                R++ ++++R  M+   F+E  TP+L            +P   N   F     AL 
Sbjct: 195 VRFTARSKAVSALREFMVGHGFLEVETPMLHP----------IPGGANAKPFKTHHNALD 244

Query: 196 Q------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           Q      AP+ Y + L+  GF+R F+I   +R+E   S R   EF  ++   ++    D+
Sbjct: 245 QEMFLRIAPELYLKRLIVGGFERVFEINRSYRNEGI-SVRHNPEFTMMEFYAAYWNYRDL 303

Query: 250 LNTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRRY 286
           ++  E ++R + ++               ++  F R+   +AI +Y
Sbjct: 304 MDFTETLIRTIADKAVGTQQLTYQGKPVDLTQPFERLTIREAILKY 349



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR++MLL  + ++R+V LFP
Sbjct: 478 RALEYGMPPTGGCGIGIDRLMMLLTDSPSIRDVILFP 514


>gi|317026036|ref|XP_001388795.2| lysyl-tRNA synthetase [Aspergillus niger CBS 513.88]
          Length = 568

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 3/127 (2%)

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
           N+++ R+ ++  +R   +   F+E +TPI+ A +    AR F   +        +L  AP
Sbjct: 212 NVIRARSAVVQYLRQFFVDRAFMEVNTPIIEAVAGGAIARPFHTTATEFPDRQLSLRIAP 271

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+  GFDR F+I P FR+E       P EF   +   ++   +D++ T E +L 
Sbjct: 272 ELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP-EFTTCEFYHAYANLEDLMTTTEQLLS 330

Query: 259 GVFEEFS 265
           G+ E  +
Sbjct: 331 GLAEHLT 337


>gi|261821337|ref|YP_003259443.1| asparaginyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261605350|gb|ACX87836.1| asparaginyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 466

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 122/334 (36%), Gaps = 71/334 (21%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV----RSEWVLC 72
           V S V + GWV R R          RD       +A  D +CF   ++V     S +   
Sbjct: 16  VDSEVTVRGWV-RTR----------RDSKAGISFIAVYDGSCFNPLQAVVNNNLSNYQDD 64

Query: 73  IDGLVMSRSAETINANIIT----GQ-IELSAQKIEILS-VAEELPLPVFGEREYPESIRF 126
           +  L    S E I  N++     GQ  EL A  + ++  V +    P+  +R    SI +
Sbjct: 65  VLRLTTGCSVE-ITGNVVASPGEGQSFELQATHVNVVGWVDDPDTYPMAAKRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +     R   EN +   STP++TAS  EGA +     
Sbjct: 121 LREVAHLRPRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLITASDTEGAGEMF--- 177

Query: 185 RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDED 224
           RV+      LP+  Q                    Q      A      +   P FR E+
Sbjct: 178 RVSTLDLENLPRTEQGKVDFSEDFFGKEAFLTVSGQLNGETYACALSNVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT--------------- 269
             + R   EF+ ++ E++F   DD+    EN+L+ VF+   N                  
Sbjct: 238 SNTSRHLAEFWMIEPEVAFASLDDVAGLAENLLKYVFQAVLNERADDMAFFAERVDKEAV 297

Query: 270 ------VSNNFLRICYDDAIRRYGTDKPDLRNPI 297
                 VS++F ++ Y DA+           NP+
Sbjct: 298 TRLEKFVSSDFAQVDYTDAVEILLNCGQQFENPV 331


>gi|168058919|ref|XP_001781453.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667090|gb|EDQ53728.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 589

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/269 (21%), Positives = 116/269 (43%), Gaps = 27/269 (10%)

Query: 5   RTHSCGDLG-----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-- 51
           RTH+  +L             ++    V ++G +   R  G + FL +RD  G  Q+   
Sbjct: 96  RTHTAAELQKQYVDLPSATEANEEKDHVAVAGRIIARRVFGKLAFLTMRDDSGDIQLYCE 155

Query: 52  -ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
            A      F+  K++            M R+ E    +++ G++ +  + +        L
Sbjct: 156 KAKLTDEAFDQLKTLMDIGDFIGAKGTMKRT-EKGELSVLVGELSILTKSL--------L 206

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           PLP           R++ R++D+  +     + + R +II+ +R  M +  ++E  TP+L
Sbjct: 207 PLPDKWHGLTDVEKRYRQRYVDMIMNPDVATVFRDRAKIISEIRRHMESLGYLEIETPVL 266

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + ++  GF+R ++I   FR+E   + 
Sbjct: 267 QGEAGGADARPFVTHHNALGQDMY-LRIATELHLKRMVVGGFERVYEIGRIFRNEGISTR 325

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVL 257
             P EF  +++  ++ + DD++N  E ++
Sbjct: 326 HNP-EFTSIELYQAYADYDDMMNLAEEIV 353



 Score = 44.7 bits (104), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 28/40 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP  G+  GIDR+VMLL  + ++R+V  FP+ ++
Sbjct: 549 ALEYGMPPTAGMGIGIDRLVMLLTDSASIRDVIAFPVMKS 588


>gi|256827724|ref|YP_003151683.1| lysyl-tRNA synthetase (class II) [Cryptobacterium curtum DSM 15641]
 gi|256583867|gb|ACU95001.1| lysyl-tRNA synthetase (class II) [Cryptobacterium curtum DSM 15641]
          Length = 771

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 94/210 (44%), Gaps = 20/210 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKSVRSEWVLCIDGL 76
           V ++G +  +R  G I+F+ +R+  G  Q+        D A   +      +W+     +
Sbjct: 67  VAMAGRIMAIRNQGKIMFMVLREREGDIQLFCRVNELGDEAFSRMTNFDLGDWIAVTGTI 126

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           + ++  E    ++     EL ++ I         PLP        +  R++ R++DL  +
Sbjct: 127 LRTKRGEL---SVAVTSFELMSKSIR--------PLPEKFHGLTDKETRYRQRYVDLVVN 175

Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYA 193
              K + + R++II++ R  M  E + E  TPIL        A+ F+   + +NQ  +  
Sbjct: 176 PQVKQVFINRSKIISACRTYMAQEGYYEAETPILQEIMGGANAKPFITHFNALNQECYLR 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           +  A + + + L+  G DR ++I   FR+E
Sbjct: 236 I--ATELHLKRLLVGGMDRVYEIGRIFRNE 263



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GGI  GIDR+VMLL  + ++R+V LFP
Sbjct: 460 RALEYGMPPAGGIGIGIDRLVMLLTDSVSIRDVLLFP 496


>gi|332653647|ref|ZP_08419391.1| asparagine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332516733|gb|EGJ46338.1| asparagine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 469

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/318 (20%), Positives = 121/318 (38%), Gaps = 70/318 (22%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V + GW   +R      F+++ D             +CF+  + V       +D  V
Sbjct: 23  GQTVTVCGWARTIRDMKTFGFIELND------------GSCFKNLQIV-------MDANV 63

Query: 78  MSRSAETINAN-----IITGQIELS---AQKIEIL--SVAEELP-LPVFGEREYPESIRF 126
           +    E    N     I+TG + L+    Q +E+   ++A E P  P +  ++   S+ F
Sbjct: 64  LDNYKEIAGQNVGAALIVTGTVVLTPGAKQPLEVKADTIAVEGPSAPDYPLQKKRHSVEF 123

Query: 127 KYRFLDLR-RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR R  L     + R+   +++ C    + F+   TPI+TAS  EGA +    +
Sbjct: 124 LRTIQHLRPRTNLFSAAFRVRSATAHAIHCFFQDQGFVYVHTPIITASDCEGAGEMFQVT 183

Query: 185 RVNQGSFYALPQAPQQYKQLL-----------------MASGFDRYFQIAPCFRDEDPRS 227
            ++  +          Y +                    A  F   +   P FR E   +
Sbjct: 184 TLDLENVPKNEDGTVDYSKDFFGKRANLTVSGQLNCENFAMAFGNVYTFGPTFRAEKSNT 243

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSNG------ 267
            R   EF+ ++ EM+F + +D ++  E +++ V              F  F +       
Sbjct: 244 QRHAAEFWMIEPEMAFADLNDYMDNAEAMIKYVIRYVLDKCPDEINFFNSFVDKGLKERL 303

Query: 268 -NTVSNNFLRICYDDAIR 284
            +  S++F R+ Y DA++
Sbjct: 304 EHVASSDFARVSYTDAVK 321


>gi|163786312|ref|ZP_02180760.1| lysyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159878172|gb|EDP72228.1| lysyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 562

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 18/252 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-G 75
           G  V ++G +  +   G   F  ++D  G  QV  N D  C    KS+ ++ +   ID G
Sbjct: 46  GKQVIVAGRLMAINVQGKASFAQLQDSEGRIQVYFNRDEICTGEDKSLYNDVFKKLIDLG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRFK 127
             +    E     +  G+  +  ++ ++LS A + PLP+  +++         PE  R++
Sbjct: 106 DFVGIEGELFTTKV--GEKTIMVREFKLLSKALK-PLPIPKQKDGVTYDAFTDPEQ-RYR 161

Query: 128 YRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R+ DL  +   K + +KRT++ N+MR       + E  TPIL        AR F+    
Sbjct: 162 QRYADLAVNPHVKEVFIKRTKLFNAMRQFFNDAGYFEVETPILQPIPGGAAARPFITHHN 221

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +S+ +
Sbjct: 222 SLDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVSYKD 279

Query: 246 QDDILNTMENVL 257
            + +++  E +L
Sbjct: 280 YNWMMDFCEQLL 291



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 455 RALEYGMPPTSGMGIGMDRLIMFLTNNQSIQEVLFFP 491


>gi|217034008|ref|ZP_03439430.1| hypothetical protein HP9810_891g12 [Helicobacter pylori 98-10]
 gi|216943516|gb|EEC22967.1| hypothetical protein HP9810_891g12 [Helicobacter pylori 98-10]
          Length = 501

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + D    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESAILQAYVSQDELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFETEGFLEVETPMMHPI-PGGANARPFITYHNALEIERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|195151145|ref|XP_002016508.1| GL10450 [Drosophila persimilis]
 gi|194110355|gb|EDW32398.1| GL10450 [Drosophila persimilis]
          Length = 460

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 130/324 (40%), Gaps = 58/324 (17%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  + + GW+  +R      FLDI D            S+ F++      E      G V
Sbjct: 24  GDSLGIRGWIKNIRRLKNNTFLDIDD---------GSSSSRFQVVVPRNPETQNLTPGSV 74

Query: 78  MSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGEREYPESIRFKYRFLDLR 134
           +S   E   A    G  EL A ++E L+   + +  P     ++  PE +R ++  L  R
Sbjct: 75  ISAVGEIQVAP--NGNFELHADRVESLAEGHLQDGYPF-TPKQKHAPEYVR-EHLHLRSR 130

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            D +   +  R +   ++   M   +F++ +TP++T +  EGA +     RV   S   L
Sbjct: 131 VDYVAAQMRIRHKAQKAIHDYMDELDFVQINTPLMTTNDCEGAGEVF---RVQPDSEELL 187

Query: 195 PQ-------APQQY---KQLL----------MASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            Q       A Q Y   K  L          M  G    + +AP FR E+ +S     EF
Sbjct: 188 KQMARPNVPAEQSYFDSKVFLSVSGQLHLEAMTYGLGNTYCLAPAFRAENSKSPLHLAEF 247

Query: 235 YQLDMEMSFVEQ--------DDILNTMEN-VLRGVFEEFS----NGNTVSN------NFL 275
           Y  + E++ +++        + +L ++ N VL    E+      N N  S+       + 
Sbjct: 248 YMFEAELAHLDELEKLAKFIEQMLKSITNRVLETSSEDLHFCQRNANASSDLPWLTVPWT 307

Query: 276 RICYDDAIRRYGTDKPDLRNPIIM 299
            + YDDA+     +K  L+ PI +
Sbjct: 308 IMSYDDALHVLLANKESLKTPISL 331


>gi|260581351|ref|ZP_05849167.1| asparaginyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1574761|gb|AAC22949.1| asparaginyl-tRNA synthetase (asnS) [Haemophilus influenzae Rd KW20]
 gi|260092018|gb|EEW75965.1| asparaginyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 477

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 111/275 (40%), Gaps = 38/275 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE 
Sbjct: 23  GKVAIGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYE------SEI 76

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           +    G  +  + + + +      +EL A+K+E+    E+    P+  +R    SI +  
Sbjct: 77  LRLTTGCSVIVTGKVVESPAEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLR 133

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV
Sbjct: 134 EVAHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RV 190

Query: 187 NQGSFYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPR 226
           +      LP++        Q +   +  L  SG            + +   P FR E+  
Sbjct: 191 STLDLENLPRSENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 250

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ ++ E++F    D     E++L+ VF
Sbjct: 251 TTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVF 285


>gi|34556537|ref|NP_906352.1| lysyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|39932014|sp|Q7MAR1|SYK_WOLSU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|34482251|emb|CAE09252.1| LYSYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 507

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 20/276 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +  +R  G   F  I D  GI Q+  + +    E+ +  +    L   G +++ S 
Sbjct: 63  IAGRIKFLRHMGKAAFAKIEDESGILQIYFSQN----ELGEDFKMLKKLAEVGDIVAVSG 118

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
                   TG++ L A +++IL+ A  +PLP          +R++ R+LDL  +   K  
Sbjct: 119 FPFVTK--TGELSLHALEMKILTKAI-VPLPEKYHGLVDVELRYRQRYLDLIMNPEVKET 175

Query: 143 VK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-GSFYALPQAPQQ 200
            K R+++++S+R       F+E  TP++    P GA      +  N  G    L  AP+ 
Sbjct: 176 FKLRSQVVSSVRRFFEERGFLEVETPMMH-PIPGGANAKPFITHHNALGVDRYLRIAPEL 234

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF+  F+I   FR+E       P EF  ++   ++    ++++  E +   +
Sbjct: 235 YLKRLVVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYKTYHELMSLTEELFGYL 293

Query: 261 FEEFS------NGNTV---SNNFLRICYDDAIRRYG 287
           FE         +G  +   S  F RI Y  A+   G
Sbjct: 294 FERLGLPKILPHGEEMIDFSLPFRRIPYKKALHEIG 329



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   G+PP  G   GIDR+VMLL   +++++V LFP
Sbjct: 455 ALGHGLPPTAGEGIGIDRLVMLLTNNRSIKDVILFP 490


>gi|148826050|ref|YP_001290803.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|166231666|sp|A5UCB9|SYN_HAEIE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148716210|gb|ABQ98420.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 467

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 111/275 (40%), Gaps = 38/275 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE 
Sbjct: 13  GKVAIGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYE------SEI 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           +    G  +  + + + +      +EL A+K+E+    E+    P+  +R    SI +  
Sbjct: 67  LRLTTGCSVIVTGKVVESPSEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLR 123

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV
Sbjct: 124 EVAHLRPRTNIIGAVSRVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RV 180

Query: 187 NQGSFYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPR 226
           +      LP++        Q +   +  L  SG            + +   P FR E+  
Sbjct: 181 STLDLENLPRSENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 240

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ ++ E++F    D     E++L+ VF
Sbjct: 241 TTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVF 275


>gi|145629371|ref|ZP_01785169.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145638871|ref|ZP_01794479.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|144978214|gb|EDJ87978.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145271843|gb|EDK11752.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309750848|gb|ADO80832.1| Asparaginyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 467

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 38/275 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE 
Sbjct: 13  GKVAIGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYE------SEI 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           +    G  +  + + + +      +EL A+K+E+    E+    P+  +R    SI +  
Sbjct: 67  LRLTTGCSVIVTGKVVESPAEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLR 123

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV
Sbjct: 124 EVAHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RV 180

Query: 187 NQGSFYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPR 226
           +      LP+         Q +   +  L  SG            + +   P FR E+  
Sbjct: 181 STLDLENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 240

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ ++ E++F    D     E++L+ VF
Sbjct: 241 TTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVF 275


>gi|294626361|ref|ZP_06704963.1| asparaginyl-tRNA synthetase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292599362|gb|EFF43497.1| asparaginyl-tRNA synthetase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 464

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 112/276 (40%), Gaps = 44/276 (15%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D   +   QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
           +++    +        GQ  E+ A  ++I+   E+ L  P+  +   PE +R       L
Sbjct: 77  VLVKSQGK--------GQSFEIQASGVDIVGWVEDPLTYPIQPKPMTPEFLR---EVAHL 125

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R R  L   + +    +     R   +N F   STPI+T S  EGA       RV+    
Sbjct: 126 RPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMF---RVSTLDM 182

Query: 192 YALPQAPQQ----------YKQLLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
             LP+               +  L  SG            + +   P FR E+  + R  
Sbjct: 183 VNLPRDASGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHL 242

Query: 232 GEFYQLDMEMSFVE--QDDIL--NTMENVLRGVFEE 263
            EF+ ++ E++F +  +D +L    ++ + R V +E
Sbjct: 243 AEFWMIEPEIAFADLAEDALLAEQFLKYLFRAVLDE 278


>gi|134054891|emb|CAK36903.1| unnamed protein product [Aspergillus niger]
          Length = 585

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 3/127 (2%)

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
           N+++ R+ ++  +R   +   F+E +TPI+ A +    AR F   +        +L  AP
Sbjct: 229 NVIRARSAVVQYLRQFFVDRAFMEVNTPIIEAVAGGAIARPFHTTATEFPDRQLSLRIAP 288

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+  GFDR F+I P FR+E       P EF   +   ++   +D++ T E +L 
Sbjct: 289 ELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP-EFTTCEFYHAYANLEDLMTTTEQLLS 347

Query: 259 GVFEEFS 265
           G+ E  +
Sbjct: 348 GLAEHLT 354


>gi|283850394|ref|ZP_06367683.1| asparaginyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283574420|gb|EFC22391.1| asparaginyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 466

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/320 (20%), Positives = 120/320 (37%), Gaps = 52/320 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           +R+ GWV   R   G  FL+I D   ++  QV+     A  ++ K + +   + + G ++
Sbjct: 21  IRVMGWVRTRRDAKGFSFLEINDGSCLSNLQVLVEEGIAGADLVKDLGTGAAVDVAGALV 80

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +   +        GQ  E+ A  + +L  A+    P+  +R   E +R     L  R + 
Sbjct: 81  ASPGK--------GQRFEVKATALTLLGGADTEAYPLQKKRHSDEFLR-TIAHLRPRTNK 131

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF----------------L 181
               +  R  +  ++        F    TPI+T S  EGA +                 L
Sbjct: 132 YGAMLRLRAALGQAVHAFFAERGFYWVHTPIITGSDCEGAGEMFRVTALSAAEAAAEAVL 191

Query: 182 VPSRVNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            P+      F+   A      Q     +A    R +   P FR E   + R   EF+ ++
Sbjct: 192 PPAERGSRDFFGKDAYLTVSGQLTAEPLACALGRVYAFGPTFRAEHSDTSRHAAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLR--------------GVFEEFSN-------GNTVSNNFLRI 277
            EM+F + +D +   E +L+              G+F ++ +          +   F+R+
Sbjct: 252 PEMAFADLEDNMELGEGLLKHMVRVAMEDCAEDFGLFAKYVDPKLPETLATLLDAPFVRL 311

Query: 278 CYDDAIRRYGTDKPDLRNPI 297
            Y +A++     K     P+
Sbjct: 312 PYAEAVKILLAAKKTFEYPV 331


>gi|83589024|ref|YP_429033.1| lysyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|123739358|sp|Q2RM49|SYK_MOOTA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|83571938|gb|ABC18490.1| lysyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 489

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 128/288 (44%), Gaps = 29/288 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCID 74
           G  V L+G +  +R HG   F D++D  G  Q+    D+     +E+ + +    ++ + 
Sbjct: 50  GQEVALAGRLLAIRSHGKASFADLQDREGRLQLYIRLDNVGPGIYELFQKLDIGDIVGVR 109

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V              G+I +  +++ +L  +   PLP          +R++ R+LDL 
Sbjct: 110 GKVFRTH---------RGEISVEVRQLTLLCKSLR-PLPEKWHGLKDVDLRYRQRYLDLI 159

Query: 135 RDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
            +   K + + R RII ++R  +    F+E  TP +   +    AR F+          Y
Sbjct: 160 VNPEVKQVFITRARIIRAIRSFLDNRGFLEVETPTMHPIAGGAAARPFITHHNALDIDLY 219

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + + + L+  G ++ +++   FR+E   +   P EF  L++  ++ +   +++ 
Sbjct: 220 -LRIALELHLKRLLVGGLEKVYEMGRIFRNEGISTKHNP-EFTMLELYQAYADYYVMMDL 277

Query: 253 MENVLRGVFEEFSNGNTV----------SNNFLRICYDDAIRR-YGTD 289
           +E ++  V  E + G TV          +  + R+   +AI++ YG D
Sbjct: 278 LEEMVAYVARE-ALGTTVVTYQGDRLDLTPPWPRLTMLEAIKKYYGVD 324



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + GMPP GG+  GIDR+VM+L  + ++R+V LFP
Sbjct: 446 QALEYGMPPAGGMGIGIDRLVMVLTDSPSIRDVILFP 482


>gi|30995440|ref|NP_439453.2| asparaginyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|20141639|sp|P43829|SYN_HAEIN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
          Length = 467

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 111/275 (40%), Gaps = 38/275 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE 
Sbjct: 13  GKVAIGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYE------SEI 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           +    G  +  + + + +      +EL A+K+E+    E+    P+  +R    SI +  
Sbjct: 67  LRLTTGCSVIVTGKVVESPAEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLR 123

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV
Sbjct: 124 EVAHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RV 180

Query: 187 NQGSFYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPR 226
           +      LP++        Q +   +  L  SG            + +   P FR E+  
Sbjct: 181 STLDLENLPRSENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 240

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ ++ E++F    D     E++L+ VF
Sbjct: 241 TTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVF 275


>gi|311087773|gb|ADP67852.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 466

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 133/342 (38%), Gaps = 59/342 (17%)

Query: 6   THSCGDLGVSD--VGSFVRLSGWV-HRVRPHGGIIFLDIRDH--YGITQVVANPDSACF- 59
           T S  D+   D  V S + + GWV +R     G  F+ I D   +   QV+AN     + 
Sbjct: 3   TVSISDIYKDDIIVNSVITVCGWVRNRRSSKSGFSFITIYDGSCFNSIQVIANNTLPNYY 62

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGE 117
            EI        V+    L++S   +         + E+  +KI++L   E     P+  +
Sbjct: 63  KEILHLTTGCSVMLSGKLILSIGDKQ--------KYEIQLKKIKVLGWVENPETYPISSK 114

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPE 175
           +   E +R       LR  T     + R R  I++S+      E +    TPI+T+ + E
Sbjct: 115 KHSTEYLR---EVAHLRSRTNLIGAIARIRNYILHSLHHFFYKEKYYWVPTPIITSLNTE 171

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAP 218
           GA +    S ++  +      +   +K+        L  SG            + +   P
Sbjct: 172 GAGEMFRVSTLDMENIPKNLDSSVDFKKDFFGKESFLTVSGQLNLETYACSLSKVYTFGP 231

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV--------------FEEF 264
            FR E+  + R   EF+ L++E +F + +DI +  E +L+ V               E +
Sbjct: 232 TFRAENSNTGRHLAEFWMLEVESAFTDLNDISDFAECMLKYVCKSLLKKCITDINFLENY 291

Query: 265 SNGNTVSN-------NFLRICYDDAIRRYGTDKPDLRNPIIM 299
           +N N V         +F+RI Y + I      K    N + +
Sbjct: 292 TNSNIVDRLEKFLLVDFVRIDYVEVINILLDSKIKFNNSVFL 333


>gi|254416475|ref|ZP_05030227.1| lysyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196176679|gb|EDX71691.1| lysyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 516

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 76/349 (21%), Positives = 145/349 (41%), Gaps = 28/349 (8%)

Query: 10  GDLGVSDVGSF-VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSV 65
            DLG  +   F V ++G +   R  G + F +++D  G  Q+  +     +   ++    
Sbjct: 54  ADLGNGEEVDFEVAIAGRILARRVFGKLAFFNLQDETGTIQLYLDKKRITATMTDLPNPF 113

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                L   G ++         +   G++ +   +  IL+ +  LPLP           R
Sbjct: 114 TPLKQLTDIGDILGVKGTIKRTD--KGELSVYVSEYAILTKSL-LPLPDKWHGLTDTEKR 170

Query: 126 FKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP 183
           ++ R++DL  + T+ +   +R +I  ++R  +    FIE  TP+  T +    AR F+  
Sbjct: 171 YRQRYVDLMVNPTVRETFRRRAKITAAIRRYLEDRGFIEIETPVFSTEAGGAEARPFITY 230

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               +   Y L  A + + + L+  GF++ F++   FR+E   +   P EF  +++  ++
Sbjct: 231 HNTLEMELY-LRIATELHLKRLIVGGFEKVFELGRIFRNEGISTRHNP-EFTSIEVYQAY 288

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            + +D++   EN++  V +E       S   L I Y      +    P  R  + MH + 
Sbjct: 289 ADYNDMMTLTENLITTVTQE-------SLTTLEITYQGETIDF---TPPWRR-VTMHELV 337

Query: 304 EHFVHSEFRVF-----SKILSVNPGYE-VWAIPAKGGGGNRAFCDRMNE 346
           +     +F  F     +KI +   G E V   P+ G   N  F  +  E
Sbjct: 338 QEVTGLDFNQFKTFDEAKIAAKKVGIEGVEDCPSLGKLLNECFEQKCEE 386



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 468 ALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPL 504


>gi|159040202|ref|YP_001539455.1| lysyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157919037|gb|ABW00465.1| lysyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 502

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 14/237 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEWVLCID- 74
            G  V ++G V  +R  G + F  +RD  G   Q + + D     +      +W   +D 
Sbjct: 63  TGDRVSVTGRVIFIRNTGKLCFATLRDGDGTELQAMLSLD----RVGAQRLEDWKRLVDL 118

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G ++  + E I +    G++ + A++  + + A   PLPV   +   E  R + R++DL 
Sbjct: 119 GDLVGVTGEVITSR--RGELSVLAEEWAVTAKALR-PLPV-AHKPLSEEARVRQRYVDLI 174

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            R    + +  R   + S+R  +    F+E  TP+L        AR F+  S       Y
Sbjct: 175 VRPQARQMVRTRATAVRSLRESLHERGFLEVETPMLQLLHGGATARPFVTHSNALSSDLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            L  AP+ + +  +  G D  F+I   FR+E   S   P EF  L+   ++ + D I
Sbjct: 235 -LRIAPELFLKRALVGGIDHIFEINRNFRNEGVDSSHSP-EFAMLEAYQAYGDYDTI 289



 Score = 44.7 bits (104), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL------YRAFQCGMP 534
           ++DL   GFE+ +G   + + + ++Q    V  ++         +       RA + GMP
Sbjct: 412 KWDLYVLGFELGTG--YSELVDPVIQRERLVAQAQLAARGNDEAMRLDEDFLRAMEYGMP 469

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR++M L G   +RE  LFP+
Sbjct: 470 PSGGMGMGIDRLLMALTGL-GIRETILFPL 498


>gi|157369974|ref|YP_001477963.1| asparaginyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166980090|sp|A8GCJ5|SYN_SERP5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|157321738|gb|ABV40835.1| asparaginyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 466

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 118/299 (39%), Gaps = 37/299 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G + V S V + GWV   R    GI FL + D      + A  +++       V      
Sbjct: 12  GRAAVDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPLQAVVNNSLPNYQDEVLHLTTG 71

Query: 72  C---IDGLVMSRSAETINANIITGQ-IELSAQKIEILS-VAEELPLPVFGEREYPESIRF 126
           C   + G+V++   E        GQ  EL A  I+++  V +    P+  +R    SI +
Sbjct: 72  CSIEVTGVVVASPGE--------GQSFELQATAIKVVGWVDDPDTYPMAAKRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +     R   EN F   STP++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNLIGAVARVRHTLAQAIHRFYHENGFFWVSTPLITASDTEGAGEMFRVS 180

Query: 185 --------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
                   R ++G+      F+   A      Q      A    + +   P FR E+  +
Sbjct: 181 TLDLENLPRTDKGAVDFSQDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD-DAIRR 285
            R   EF+ ++ E++F + +DI    E +L+ VF+   N       F     D DAI R
Sbjct: 241 SRHLAEFWMIEPEVAFADLEDIAELAEKMLKYVFQAVLNERMDDMQFFAERVDKDAIDR 299



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+ Q    +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGAQREERLDVLDQRLEAMGLNKEDY-----WWYRDLRRYGTVPHAGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|115400689|ref|XP_001215933.1| asparaginyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114191599|gb|EAU33299.1| asparaginyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 574

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 120/290 (41%), Gaps = 37/290 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV------ANPDSACFEIAKS--VRSEW 69
           G+ VR+ G +HR+R    +IF+ + D YG  Q +         D+    IA S  +  E 
Sbjct: 149 GTRVRVLGRIHRLRAQKDVIFITLADGYGYMQCILTGNLTKTYDAMTLTIATSMAIHGEM 208

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKY 128
                G     + E ++A+  T     +  K  I + VA +           P+++ +  
Sbjct: 209 RAVPPGQHAPNNRE-LHADFFTVIGRAAGDKEAITNRVAHDAD---------PQTL-YDN 257

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R L LR +T    +  R   + + R        +E + P +  +  EG           +
Sbjct: 258 RHLVLRGETASAVMKVRAATLRAFRQTFEEHRMLEVTPPAMVQTQVEGGSTLFKFDYYGE 317

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            ++  L Q+ Q Y +  + S  D  F + P FR E   + R   E+  ++ E+ F+  +D
Sbjct: 318 NAY--LTQSSQLYLETCLPSMGD-VFCVCPSFRAEKSLTRRHLSEYTHIEAELDFITFND 374

Query: 249 ILNTMENVL-------------RGVFEEFS-NGNTVSNNFLRICYDDAIR 284
           +L+ +E+V+               + ++ + +  T S  F R+ Y DAI+
Sbjct: 375 LLDHLESVICRVIDLTLADPATAALLKQLNPDFKTPSRPFRRMKYSDAIQ 424


>gi|88854781|ref|ZP_01129447.1| lysyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88815942|gb|EAR25798.1| lysyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 499

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 24/281 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAKSVRSEWVLCID- 74
            G  V L+G +  +R  G + F  ++   G   QV+ +      E+ +   + W   +D 
Sbjct: 63  TGDVVGLAGRIVHLRNTGKLCFASLQSGDGERIQVMVS----LGEVGEDSLALWKEVVDL 118

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G  +  S E I++    G++ +  +  +I S A  LPLP    ++  +  R + R+LDL 
Sbjct: 119 GDHLFVSGEIISSR--RGELSVMVKDWKIASKAV-LPLPNL-HKDLSDEQRVRSRYLDLI 174

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
            R+     +  R ++  S+R    A +++E  TP+L T      AR F+  S       Y
Sbjct: 175 VREQARFTVRARAKVNASLRATFAAHDYLEVETPMLQTMHGGASARPFVTHSNAFDIELY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM--------EMSFV 244
            L  AP+ + +  +  G +R F+I   FR+E   S   P EF  ++         +M+ +
Sbjct: 235 -LRIAPELFLKRAVVGGIERAFEINRNFRNEGADSTHSP-EFAMVEAYQAYGDYNQMADL 292

Query: 245 EQDDILNTMENVLRGVFEEFSNGNT--VSNNFLRICYDDAI 283
            Q+ + N+   V   +    ++G    +  ++ RI   D++
Sbjct: 293 TQELVQNSALAVAGSMLVTLTDGTEYDLGGDWARISMYDSL 333



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 13/92 (14%)

Query: 481 QYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           ++DL   GFE+A+G          R    E  L A S   +    ++  F    RA + G
Sbjct: 411 KWDLYVRGFELATGYSELVDPVIQRERFVEQALLA-SQGDVEAMRLDEDF---IRALEHG 466

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           MPP GGI  G+DR++M + G   +RE  LFP+
Sbjct: 467 MPPTGGIGVGVDRLLMAITGL-GIRETILFPL 497


>gi|320540482|ref|ZP_08040132.1| asparaginyl tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320029413|gb|EFW11442.1| asparaginyl tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 466

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 121/327 (37%), Gaps = 49/327 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G + V S V + GWV   R    GI FL + D      + A  D +      + + E + 
Sbjct: 12  GRAAVDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFNPLQAVVDHSL----PNYQDEVLH 67

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRF 130
              G  +  + + + +       EL    I ++  V +    P+  +R    SI +    
Sbjct: 68  LTTGCSVEVTGKVVASPGEGQSFELQVTAINVVGWVDDPDTYPMAAKRH---SIEYLREV 124

Query: 131 LDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPS---- 184
             LR  T     V R R  +     R   EN F   STP++TAS  EGA +    S    
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRYYHENGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 185 ----RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
               R +QG+      F+   A      Q      A    + +   P FR E+  + R  
Sbjct: 185 ENLPRTDQGAIDFSEDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHL 244

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT---------------------V 270
            EF+ ++ E++F   DD+    E +L+ VF+   N                        V
Sbjct: 245 AEFWMIEPEVAFATLDDVAALAEKMLKYVFQAVLNERIDDMKFFAERVDKDAIDRLQRFV 304

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           S++F ++ Y +A+           NP+
Sbjct: 305 SSDFAQVSYTEAVEILLASGQTFENPV 331



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+ Q  + +G++KE       G YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDQRLAEMGLNKEDY-----GWYRDLRRYGTVPHAGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|253688172|ref|YP_003017362.1| asparaginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251754750|gb|ACT12826.1| asparaginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 466

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 122/334 (36%), Gaps = 71/334 (21%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV----RSEWVLC 72
           V S V + GWV R R          RD       +A  D +CF   ++V     S +   
Sbjct: 16  VDSEVTVRGWV-RTR----------RDSKAGISFIAVYDGSCFNPLQAVVNNNLSNYQDD 64

Query: 73  IDGLVMSRSAETINANIIT----GQ-IELSAQKIEILS-VAEELPLPVFGEREYPESIRF 126
           +  L    S E I  N++     GQ  EL A  + ++  V +    P+  +R    SI +
Sbjct: 65  VLRLTTGCSVE-ITGNVVASPGEGQSFELQATNVNVVGWVDDPDTYPMAAKRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +     R   EN +   STP++TAS  EGA +     
Sbjct: 121 LREVAHLRPRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLITASDTEGAGEMF--- 177

Query: 185 RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDED 224
           RV+      LP+  Q                    Q      A      +   P FR E+
Sbjct: 178 RVSTLDLENLPRTEQGKVDFSEDFFGKEAFLTVSGQLNGETYACALSNVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT--------------- 269
             + R   EF+ ++ E++F   DD+    EN+L+ VF+   N                  
Sbjct: 238 SNTSRHLAEFWMIEPEVAFATLDDVAGLAENLLKYVFQAVLNERADDMAFFAERVDKEAI 297

Query: 270 ------VSNNFLRICYDDAIRRYGTDKPDLRNPI 297
                 VS++F ++ Y DA+           NP+
Sbjct: 298 TRLEKFVSSDFAQVDYTDAVEILLNCGKQFENPV 331


>gi|218281530|ref|ZP_03487959.1| hypothetical protein EUBIFOR_00524 [Eubacterium biforme DSM 3989]
 gi|218217319|gb|EEC90857.1| hypothetical protein EUBIFOR_00524 [Eubacterium biforme DSM 3989]
          Length = 637

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 28/43 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + G+PP GG+  GIDR VMLL   + +REV LFP  +N  D
Sbjct: 453 ALEYGLPPTGGVGLGIDRFVMLLTDQRTIREVLLFPHMKNLGD 495


>gi|187735195|ref|YP_001877307.1| asparaginyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187425247|gb|ACD04526.1| asparaginyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 456

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 113/288 (39%), Gaps = 44/288 (15%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GWV   R      FL++ D   +   QVVA+     +E              G + 
Sbjct: 20  VLIQGWVRTRRDSKAFSFLEVNDGSSVASLQVVADEGIPGYERI------------GEMA 67

Query: 79  SRSAETINANIITGQ----IELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRFLDL 133
           + SA +I   ++ GQ     EL A  +E++ +V +  PL   G    PE +R     L  
Sbjct: 68  TGSAVSIRGALVAGQGRQRWELRAASLELVGAVPDSYPLQKKGHT--PEFLR-SIAHLRP 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPS 184
           R +        R+R+  ++       +F   STPI+TAS  EGA +             S
Sbjct: 125 RTNLFGAVFRMRSRLAFAIHRFFQERDFSWVSTPIITASDCEGAGEMFRVTTLDVGDATS 184

Query: 185 RVNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           R     F+   A      Q +    A      +   P FR E+  + R   EF+ ++ EM
Sbjct: 185 RDASRDFFGKAAYLTVSGQLEGEAFACALSNIYTFGPTFRAENSNTTRHAAEFWMVEPEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-----FLRICYDDAIR 284
           +F +    ++  E  +R     F  G+ ++N+     FL    D  +R
Sbjct: 245 AFCDLYGDMDMAEEFVR-----FLVGDALANSAEEVEFLTRFVDKGLR 287



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    +++ +   ++G++ E    R+    R +  G  PH G  AG +R++M 
Sbjct: 379 EIVGGSQREERLDILEENMRSMGMNAEAY--RWYADLRRY--GTVPHAGFGAGFERLLMF 434

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G  N+R+V  F  +   C+ 
Sbjct: 435 VTGVTNIRDVLPFARTPRNCEF 456


>gi|56418609|ref|YP_145927.1| lysyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|261417575|ref|YP_003251257.1| lysyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|297528449|ref|YP_003669724.1| lysyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|319765233|ref|YP_004130734.1| lysyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|56378451|dbj|BAD74359.1| lysyl-tRNA synthetase (lysine--tRNA ligase) [Geobacillus
           kaustophilus HTA426]
 gi|261374032|gb|ACX76775.1| lysyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|297251701|gb|ADI25147.1| lysyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|317110099|gb|ADU92591.1| lysyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 494

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 129/311 (41%), Gaps = 39/311 (12%)

Query: 5   RTHSC-------GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH         GDL   ++      V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 34  RTHKAQELFELYGDLSKEELEEKQIEVAVAGRIMTKRGKGKAGFAHIQDVTGQIQIYVRQ 93

Query: 55  DSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EEL 110
           D      +E+ K      ++ + G +              G++ +     E L+ A   L
Sbjct: 94  DDVGEQQYELFKISDLGDIVGVRGTMFKTKV---------GELSIKVSSYEFLTKALRPL 144

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           P    G ++  +  R++ R+LDL  +    K  + R+ II SMR  + +  ++E  TP++
Sbjct: 145 PEKYHGLKDIEQ--RYRQRYLDLIMNPESKKTFITRSLIIQSMRRYLDSRGYLEVETPMM 202

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            A +    AR F+        + Y +  A + + + L+  G ++ ++I   FR+E   + 
Sbjct: 203 HAVAGGAAARPFITHHNALDMTLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTR 261

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICY 279
             P EF  L++  ++ +  DI+   EN++  +  E      +         +  + R+  
Sbjct: 262 HNP-EFTMLELYEAYADFRDIMELTENLIAHIATEVLGTTKIQYGEHVVDLTPEWRRLHM 320

Query: 280 DDAIRRY-GTD 289
            DAI+ Y G D
Sbjct: 321 VDAIKEYVGVD 331



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 454 ALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFP 489


>gi|322502605|emb|CBZ37688.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 890

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 115/309 (37%), Gaps = 54/309 (17%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS------ACFEIAK 63
           G+L     G+ V + GW HRVR    + F+ +RD  G  Q V +  +      +C  I  
Sbjct: 451 GELPSHKEGACVYVVGWAHRVRHQSRMSFVVLRDGTGFIQCVFDGSTEPFHRESCVAIRG 510

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R E        +       +N   + G    S   IE +  AE     ++ +R     
Sbjct: 511 TLRHE--PKAKSELQPPMELHVNEYAVVGD---SDGTIETVITAESSVDKLYDQRHV--- 562

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                    + R TL  +++K R  ++   R    +  + E + P L  +  EG      
Sbjct: 563 ---------VVRGTLASSVLKVRHELLRVFREHFWSHQYYEVTPPTLVQTQVEGGSTLF- 612

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
              +  G    L Q+ Q Y + + AS     +   P +R E  ++ R   EF  L+ E  
Sbjct: 613 -EVLYYGEKAYLTQSSQLYLESVTAS-LGNVYCCMPSYRAERSKTKRHLSEFTHLEAEYD 670

Query: 243 FVEQDDILNTME----NVLRGVFEEFS--------------NGN---------TVSNNFL 275
               +D+LN +E     V+R V E                 NGN         T    F 
Sbjct: 671 VCSFEDLLNHLEGMFCTVIRTVIERVGDLVAMLNPSQLIDPNGNVRDPANYKFTPKRPFR 730

Query: 276 RICYDDAIR 284
           R+ Y DAI+
Sbjct: 731 RLRYADAIQ 739



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 15/93 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVV-----ENRFGGLYRAFQCGMPPH 536
           D++  G  E+  G +R +  + +L A+   G+          + R+GG          PH
Sbjct: 805 DVLAPGIGEVLGGSMRMYKYDELLDAYKREGLDASTYYWYTDQRRYGGA---------PH 855

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           GG   G++R+++ +L   +V++  L+P     C
Sbjct: 856 GGFGLGVERLLVWMLNLDSVKDACLYPRYMGRC 888


>gi|270261214|ref|ZP_06189487.1| asparaginyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270044698|gb|EFA17789.1| asparaginyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 466

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 117/303 (38%), Gaps = 45/303 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV------ 65
           G + V S V + GWV   R    GI FL + D             +CF+  ++V      
Sbjct: 12  GRAAVDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPLQAVVNNSLP 59

Query: 66  --RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122
             + E +    G  +  + + + +       EL    I+++  V +    P+  +R    
Sbjct: 60  NYQDEVLHLTTGCSIEVTGKVVASPGEGQSFELQTTAIKVVGWVDDPDTYPMAAKRH--- 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDF 180
           SI +      LR  T     V R R  +     R   EN F   STP++TAS  EGA + 
Sbjct: 117 SIEYLREVAHLRPRTNLIGAVARVRHTLAQAIHRFYHENGFFWVSTPLITASDTEGAGEM 176

Query: 181 LVPS--------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
              S        R ++G+      F+   A      Q      A    + +   P FR E
Sbjct: 177 FRVSTLDLENLPRTDKGAVDFSQDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAE 236

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD-DA 282
           +  + R   EF+ ++ E++F + +DI    E +L+ VF+   N       F     D DA
Sbjct: 237 NSNTSRHLAEFWMIEPEVAFADLEDIAELAEKMLKYVFQAVLNERMDDMQFFAERVDKDA 296

Query: 283 IRR 285
           I R
Sbjct: 297 IER 299



 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+ Q    +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGAQREERLDVLDQRLDAMGLNKEDY-----WWYRDLRRYGTVPHAGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|161761265|ref|YP_249074.2| asparaginyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 467

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 111/275 (40%), Gaps = 38/275 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE 
Sbjct: 13  GKVAIGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYE------SEI 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           +    G  +  + + + +      +EL A+K+E+    E+    P+  +R    SI +  
Sbjct: 67  LRLTTGCSVIVTGKVVESPSEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLR 123

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV
Sbjct: 124 EVAHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RV 180

Query: 187 NQGSFYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPR 226
           +      LP++        Q +   +  L  SG            + +   P FR E+  
Sbjct: 181 STLDLENLPRSENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 240

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ ++ E++F    D     E++L+ VF
Sbjct: 241 TTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVF 275


>gi|10639776|emb|CAC11748.1| asparagine--tRNA ligase related protein [Thermoplasma acidophilum]
          Length = 329

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 17/157 (10%)

Query: 149 INSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I S+    + E  FIE    I++  +         P+    G  Y+L ++   +K LL  
Sbjct: 47  IRSITSEFLKERGFIEVPPVIISVLTDPLNHPVFDPTIDYYGYKYSLTKSMIFHKHLL-T 105

Query: 208 SGFDRYFQIAPCFRDEDP---RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
             FDR F  +P  R E+    ++ R   EF QLD+EM    +D++++  E+++  +F++ 
Sbjct: 106 KHFDRIFTFSPNIRLEEEDKVKTGRHLAEFTQLDLEMKGASRDEVMSLGEDMIIDLFKKI 165

Query: 265 SNGNT------------VSNNFLRICYDDAIRRYGTD 289
              N              S  F RI Y DA ++YG D
Sbjct: 166 KRSNEEDLKFFGRDLRIPSKPFKRIAYLDAYKQYGED 202


>gi|34496515|ref|NP_900730.1| lysyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|39932059|sp|Q7NZ62|SYK_CHRVO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|34102369|gb|AAQ58735.1| lysyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 502

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 83/171 (48%), Gaps = 7/171 (4%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           TG++ + A ++ +LS     PLP        +  +++ R+ DL   +   +  +KR++I+
Sbjct: 131 TGELTVQATEVRMLS-KNIRPLPEKFHGIADQETKYRQRYADLIMSEESRETFIKRSKIV 189

Query: 150 NSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
             +R  M+ E ++E  TP++    P G  A+ F+          Y L  AP+ Y + L+ 
Sbjct: 190 QKVRDVMVGEGYLEVETPMMH-PIPGGASAKPFVTHHNALDMPLY-LRIAPELYLKRLVV 247

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            G +R F+I   FR+E   S R   EF  ++   ++ +   ++   E ++R
Sbjct: 248 GGLERVFEINRNFRNEG-MSTRHNPEFTMIEFYEAYSDYQRMMEMTETIIR 297



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  A ++R+V LFP
Sbjct: 461 RAMEYGLPPTGGCGIGIDRLVMLLTDAPSIRDVILFP 497


>gi|146311106|ref|YP_001176180.1| asparaginyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166980087|sp|A4W8U9|SYN_ENT38 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|145317982|gb|ABP60129.1| asparaginyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 466

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 107/273 (39%), Gaps = 48/273 (17%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V + GWV   R    GI FL + D             +CF+  ++V +  +   +  V+ 
Sbjct: 20  VTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNDDVLH 67

Query: 80  RSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFKYRFL 131
            +  T  + I+TG +  S    Q  E+ + A E+   V     YP      SI +     
Sbjct: 68  LT--TGCSVIVTGVVVASPGQGQSFELQATAIEVTGWVEDPDTYPMAAKRHSIEYLREVA 125

Query: 132 DLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            LR  T     V R R  +  ++      + +   STP++TAS  EGA +     RV+  
Sbjct: 126 HLRPRTNMIGAVARVRHTLAQALHRFFDEQGYFWVSTPLITASDTEGAGEMF---RVSTL 182

Query: 190 SFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
               LP+ P+                    Q      A    + +   P FR E+  + R
Sbjct: 183 DLENLPRTPEGKVDFDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSR 242

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
              EF+ L+ E++F   +D+    E +L+ VF+
Sbjct: 243 HLAEFWMLEPEVAFANLNDVAGLAEAMLKYVFK 275


>gi|20139921|sp|Q9CN06|SYN_PASMU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
          Length = 467

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 122/316 (38%), Gaps = 63/316 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEI-AKSVRSEWVLC 72
           +G  V + GW+   R    G+ FL I D   +   Q + N D   +E     + +   + 
Sbjct: 17  IGETVTVRGWIRTRRDSKAGLSFLAIYDGSCFDPIQAIVNNDIENYETEVLRLTTGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRF 130
           + G V+   AE        GQ +EL A+K+E+    E+    P+  +R    SI +    
Sbjct: 77  VTGTVVESPAE--------GQAVELQAEKVEVAGWVEDPETYPMAAKRH---SIEYLREV 125

Query: 131 LDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV+ 
Sbjct: 126 AHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RVST 182

Query: 189 GSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                LP+  +                    Q      A    + +   P FR E+  + 
Sbjct: 183 LDLENLPRDDKGAVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTT 242

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVL----RGVFEEFSNG----------------- 267
           R   EF+ ++ E++F    D     E++L    R V EE  +                  
Sbjct: 243 RHLAEFWMVEPEIAFATLADNAKLAEDMLKYVFRAVLEERKDDLKFFEKHVDNDVISRLE 302

Query: 268 NTVSNNFLRICYDDAI 283
           N ++++F +I Y DAI
Sbjct: 303 NFINSDFAQIDYTDAI 318


>gi|324506723|gb|ADY42863.1| Lysyl-tRNA synthetase [Ascaris suum]
          Length = 603

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 111/249 (44%), Gaps = 28/249 (11%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPD-----SACFEIAKSVRSEWVLCID 74
           V ++G +   R  GG +IF D+       Q++AN        A  ++ + ++   ++ + 
Sbjct: 136 VNVAGRIFSKRESGGKLIFYDLHGEGTRVQILANARFHKGREAFGDVHERIKRGDIIGVR 195

Query: 75  G-LVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRF 130
           G    S+S E            LS   IE++ +      LP   FG +   +  R++ R+
Sbjct: 196 GHPAKSKSGE------------LSVIPIEVVQLTPCLHMLPHTHFGLKN--QETRYRMRY 241

Query: 131 LDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           LDL    ++    V R ++I  +R  +    F+E  TP++   +    A+ F+       
Sbjct: 242 LDLIMNPSVKDKFVIRAKMITFLRRYLDNLGFLEVETPMMNQIAGGATAKPFITHHNELD 301

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              + L  AP+ Y ++L+  G DR +++   FR+E       P EF   +  M++ + +D
Sbjct: 302 MDLF-LRVAPELYHKMLVVGGIDRVYEVGRLFRNEGIDQTHNP-EFTTCEFYMAYADYED 359

Query: 249 ILNTMENVL 257
           ++   E++L
Sbjct: 360 LIKLTEDLL 368



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M+   + N++EV  FP
Sbjct: 547 ALEYGLPPTAGWGMGIDRLTMVFTDSNNIKEVLFFP 582


>gi|300857330|ref|YP_003782314.1| asparaginyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300437445|gb|ADK17212.1| asparaginyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 463

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/315 (22%), Positives = 126/315 (40%), Gaps = 73/315 (23%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDG-LV 77
           +++SGW+  +R      F+++ D   +   Q+V +     F+    +     L I+G LV
Sbjct: 21  IKISGWIRTLRDSKSFGFIELNDGSFFKNIQIVFDEKLPNFKELTKLAISSSLSIEGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           ++ +A+               Q  EI   A+E+ L      +YP  ++ K   L+  R  
Sbjct: 81  LTPNAK---------------QPFEIQ--AKEITLEGNSSSDYP--LQKKRHTLEYLRTI 121

Query: 138 LHKNIVKRTRIINSM-RCRMIA----------ENFIECSTPILTASSPEGARDFL----- 181
            H  +  R+   +++ R R IA            F+  +TP++T S  EGA +       
Sbjct: 122 AH--LRSRSNTFSAVFRVRSIAAYAVHKFFQERGFVYANTPLITGSDCEGAGEMFKVTSM 179

Query: 182 ----VPSRVNQGSFYALP--------QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
               +P + +    Y+              Q     MA  F   +   P FR ED  + R
Sbjct: 180 DLNNIPKKEDGSVDYSKDFFGKETNLTVSGQLSAETMALAFRNVYTFGPTFRAEDSNTAR 239

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVF--------EE------------FSNGNT 269
              EF+ ++ EM+F E  D ++  E +++ V         EE            FS  + 
Sbjct: 240 HAAEFWMIEPEMAFAELKDYMDVAEELVKYVINYVLENAPEEMAFFNSFIDKTLFSRLDN 299

Query: 270 VSNN-FLRICYDDAI 283
           V+N+ F RI Y +A+
Sbjct: 300 VANSEFGRITYTEAV 314


>gi|227329500|ref|ZP_03833524.1| asparaginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 466

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 122/334 (36%), Gaps = 71/334 (21%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV----RSEWVLC 72
           V S V + GWV R R          RD       +A  D +CF   ++V     S +   
Sbjct: 16  VDSEVTVRGWV-RTR----------RDSKAGISFIAVYDGSCFNPLQAVVNNNLSNYQDD 64

Query: 73  IDGLVMSRSAETINANIIT----GQ-IELSAQKIEILS-VAEELPLPVFGEREYPESIRF 126
           +  L    S E I  N++     GQ  EL A  + ++  V +    P+  +R    SI +
Sbjct: 65  VLRLTTGCSVE-ITGNVVASPGEGQSFELQATNVNVVGWVDDPDTYPMAAKRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +     R   EN +   STP++TAS  EGA +     
Sbjct: 121 LREVAHLRPRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLITASDTEGAGEMF--- 177

Query: 185 RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDED 224
           RV+      LP+  Q                    Q      A      +   P FR E+
Sbjct: 178 RVSTLDLENLPRTEQGKVDFSEDFFGKEAFLTVSGQLNGETYACALSNVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT--------------- 269
             + R   EF+ ++ E++F   DD+    EN+L+ VF+   N                  
Sbjct: 238 SNTSRHLAEFWMIEPEVAFATLDDVAGLAENLLKYVFQAVLNERADDMAFFAERVDKEAI 297

Query: 270 ------VSNNFLRICYDDAIRRYGTDKPDLRNPI 297
                 VS++F ++ Y DA+           NP+
Sbjct: 298 TRLEKFVSSDFAQVDYTDAVEILLNCGKQFENPV 331


>gi|210632437|ref|ZP_03297365.1| hypothetical protein COLSTE_01262 [Collinsella stercoris DSM 13279]
 gi|210159532|gb|EEA90503.1| hypothetical protein COLSTE_01262 [Collinsella stercoris DSM 13279]
          Length = 661

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GGI  GIDR+VMLL  + ++R+V LFP
Sbjct: 459 RALEYGMPPAGGIGIGIDRVVMLLTNSTSIRDVLLFP 495



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 103/209 (49%), Gaps = 18/209 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEIAKSVRSEWVLCIDGLV 77
           V + G V   R  G I+FL +RD     Q+   V + +   +   K +    ++   G+V
Sbjct: 66  VTVGGRVVAKRGQGKIMFLVLRDPSADIQLFCRVNDVEEESWATLKKLDLGDIIQATGVV 125

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRD 136
            +R+          G++ ++ +++++LS A   PLP        +  R++ R++DL   +
Sbjct: 126 -TRTKR--------GELSVAPRELKLLSKAVR-PLPEKFHGLSDKETRYRQRYVDLIVNE 175

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194
            + +   KR+ II++ R  M  + ++E  TPIL +      A+ F+   + +NQ ++  +
Sbjct: 176 DVRETFRKRSAIISTFRRYMEDDGYMEVETPILQSIQGGATAKPFITHFNALNQENYLRI 235

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             A + + + L+  G++R F+I   FR+E
Sbjct: 236 --ATELHLKRLLVGGYERVFEIGRIFRNE 262


>gi|151944461|gb|EDN62739.1| mitochondrial lysyl-tRNA synthetase [Saccharomyces cerevisiae
           YJM789]
          Length = 576

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
           + L   K+ I+    +LPLP    R   E+     R +D + +     +V R RII  +R
Sbjct: 183 LSLICNKLPIVLSVSQLPLP---SRLNDETKIKSNRVVDYQLNGTQTLLV-RARIIKLLR 238

Query: 154 CRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
             +   NF+E  TPIL++ S    A+ F+  S+        L  AP+ + + L+ SG  +
Sbjct: 239 KFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDHLELRIAPELWLKRLIISGLQK 296

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            ++I   FR+E   S     EF  L+   +++  DDI+   E++ +
Sbjct: 297 VYEIGKVFRNEGIDSTH-NAEFSTLEFYETYMSMDDIVVRTEDLFK 341


>gi|149241914|ref|XP_001526379.1| lysyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146450502|gb|EDK44758.1| lysyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 597

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 121/259 (46%), Gaps = 15/259 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPDSACFEIAKSVRSEWVLCIDGL--- 76
           V+++G +   R  G  +   +    G+  Q++A    A  E A+    E  L   G    
Sbjct: 127 VQVTGRIMTKREAGAKLRFYVLKGDGVEVQIMAQAQDA--ESAEIYEKEHDLLKRGDIIG 184

Query: 77  VMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           V+     T  A    G++ + A K+++L+     LP   +G ++  +  R++ R+LDL  
Sbjct: 185 VVGYPGRTAPAKGGDGELSVFATKVQLLTPCLHMLPTEHYGFKD--QEARYRKRYLDLIM 242

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFY 192
           +   ++I K R++II  +R  +   +F+E  TPIL   +    A+ F+   + +N   F 
Sbjct: 243 NDRSRDIFKVRSQIIKYIRKFLDDRDFVEVETPILNVIAGGATAKPFVTHHNDLNMEMFM 302

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ + + L+  G +R ++I   FR+E       P EF   +   ++ +  D+++T
Sbjct: 303 RI--APELFLKELVVGGMNRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDT 359

Query: 253 MENVLRGVFEEFSNGNTVS 271
            E +   + +E + G  V 
Sbjct: 360 TEMMFSEMVKEITGGYVVK 378



 Score = 42.0 bits (97), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 26/48 (54%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
           A + G+PP  G   GIDR+ M L  +  +REV LFP  +    +L G 
Sbjct: 541 ALEYGLPPTAGWGCGIDRLAMFLTDSNTIREVLLFPTLKPDALVLKGE 588


>gi|14520464|ref|NP_125939.1| asparagine synthetase A [Pyrococcus abyssi GE5]
 gi|5457679|emb|CAB49170.1| asnS-like asparaginyl-tRNA synthetase related protein [Pyrococcus
           abyssi GE5]
          Length = 294

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 14/187 (7%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECS----TPILTASSPEGARDFLVPSRVN-QGSFY 192
           ++K I  +T+I++ M        F        +PI     P+ A + + P+ V+  G   
Sbjct: 11  IYKAIDIQTKILDYMTKFFTDRGFKWLLPIMLSPITDPLWPDPAGEGIRPAEVDVYGVRM 70

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDMEMSFVEQDDIL 250
            L  +   +KQL +A G ++ F ++P  R E  R D  R   EF QLD E+   +  D++
Sbjct: 71  RLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKMKDVM 130

Query: 251 NTMENVLRGVF---EEFSNGN-TVSNNFLRICYDDAIRRYGTDKP---DLRNPIIMHNVT 303
             +E ++ G+F   EE++      + +F    Y D +  +G+D+    ++  P  + N+ 
Sbjct: 131 RLIEELIYGLFRKAEEWTGREFPRARHFKVYDYKDILEEFGSDEKASMEMEEPFWIVNIP 190

Query: 304 EHFVHSE 310
             F   E
Sbjct: 191 REFYDRE 197



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 7/85 (8%)

Query: 482 YDLVCN-GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG-MPPHGG 538
           YDL+   G+ E++SGG R    E ++      G+     E+ F       + G + P  G
Sbjct: 205 YDLILPYGYGEVSSGGEREWEYEKIVAKIRAAGLK----EDSFRPYLEIARAGKLKPSAG 260

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
              G++R+V  ++GAK++ EV  FP
Sbjct: 261 AGIGVERLVRFIVGAKHIAEVQPFP 285


>gi|224534853|ref|ZP_03675422.1| asparagine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224513793|gb|EEF84118.1| asparagine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 462

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/258 (20%), Positives = 104/258 (40%), Gaps = 28/258 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA--KSVRSEWVLCIDGL 76
           V ++GW+   R +G I F+++ D   +   Q V N +   F+    K + +   + + GL
Sbjct: 18  VTINGWIRTKRSNGKIGFIEVNDGSTLKGIQAVINEEENQFDEKDLKKLTTGASISLTGL 77

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++   A+  N        E+      ++  A+    P+  +R   E +R +   L +R +
Sbjct: 78  LVESPAKGQN-------YEIKTYSFNVIGEADPKTYPLQKKRHTFEFLR-EIAHLRIRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--------- 187
           T       R +I   +        F   +TPI+T++  EGA +    S +          
Sbjct: 130 TFGAVARIRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKLNNSLS 189

Query: 188 ----QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
               +  F+   A      Q      A    + +   P FR E+  + R   EF+ ++ E
Sbjct: 190 NIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWMIEPE 249

Query: 241 MSFVEQDDILNTMENVLR 258
           M+F +  D +   E++L+
Sbjct: 250 MAFYKLSDNIVLAEDLLK 267


>gi|332830421|gb|EGK03049.1| asparaginyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 465

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 33/263 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           GS V + GWV  +R +  + F+ + D   I   Q+VA+      +  K V +   + + G
Sbjct: 19  GSVVDVKGWVRTIRGNKYVNFIHLNDGSTIHNLQIVADVQKFGDDFFKPVTTGACIHVTG 78

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++    +  +A       E+ A  IE+   A+    P+  +    E +R +  +L  R 
Sbjct: 79  TLVESQGKGQSA-------EIQADTIEVYGTADPETYPLQKKGHSLEFLR-EIAYLRPRT 130

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +T       R  +  ++      + F    TPI+TAS  EGA       +V    F  +P
Sbjct: 131 NTFGAIFRIRHHMSYAIHKYFNDKGFFYFHTPIVTASDAEGAGSMF---QVTTLDFNNVP 187

Query: 196 QA--------------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           +A                      Q +  L A      +   P FR E+  + R   EF+
Sbjct: 188 RAEGGQVDYTEDFFGRQTNLTVSGQLEGELGAMALGAIYTFGPTFRAENSNTPRHLAEFW 247

Query: 236 QLDMEMSFVEQDDILNTMENVLR 258
            ++ E++F +  D ++  E+ L+
Sbjct: 248 MIEPEVAFYDIHDNMDLAEDFLK 270


>gi|317120994|ref|YP_004100997.1| lysyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315590974|gb|ADU50270.1| lysyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 552

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 25/277 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKSVRSEWVLCI 73
           G  VR++G V  +R HG   F D++D  G  Q++A     P+       +  R +W+   
Sbjct: 114 GQVVRVAGRVMGLRRHGRAAFADLQDVSGRLQLLARVGPLPEDEYRAFLELDRGDWIGAE 173

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             ++ +R  E   +  +TG + L             LP    G R+    +R++ R++DL
Sbjct: 174 GTVIRTRRGEI--SVEVTGFVLLGKSLY-------PLPEKWHGLRDV--DLRYRQRYVDL 222

Query: 134 RRDTLHKNIVK----RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQ 188
               ++  +++    R+++I  +R  +    F E  TP+L        AR F+       
Sbjct: 223 ---VVNPQVLETFKIRSKVIREIRAFLDRRGFYEVETPVLHLIYGGAAARPFITHHNALD 279

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  A + + + L+  G +R ++I   FR+E   +   P EF  L++  +F + + 
Sbjct: 280 LDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGISTRHNP-EFTMLELYQAFSDYEG 337

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           ++   E ++  V +       V      I +    RR
Sbjct: 338 MMELTEQLVSHVAQAVHGTPVVRYQGQEIDFTPPWRR 374



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G+P  GG+  GIDR+VML+  + ++R+V LFP+
Sbjct: 511 ALEIGLPATGGLGIGIDRLVMLMTDSPSIRDVILFPL 547


>gi|15602508|ref|NP_245580.1| asparaginyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720918|gb|AAK02727.1| AsnS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 471

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 122/316 (38%), Gaps = 63/316 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEI-AKSVRSEWVLC 72
           +G  V + GW+   R    G+ FL I D   +   Q + N D   +E     + +   + 
Sbjct: 21  IGETVTVRGWIRTRRDSKAGLSFLAIYDGSCFDPIQAIVNNDIENYETEVLRLTTGCSVI 80

Query: 73  IDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRF 130
           + G V+   AE        GQ +EL A+K+E+    E+    P+  +R    SI +    
Sbjct: 81  VTGTVVESPAE--------GQAVELQAEKVEVAGWVEDPETYPMAAKRH---SIEYLREV 129

Query: 131 LDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV+ 
Sbjct: 130 AHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RVST 186

Query: 189 GSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                LP+  +                    Q      A    + +   P FR E+  + 
Sbjct: 187 LDLENLPRDDKGAVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTT 246

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVL----RGVFEEFSNG----------------- 267
           R   EF+ ++ E++F    D     E++L    R V EE  +                  
Sbjct: 247 RHLAEFWMVEPEIAFATLADNAKLAEDMLKYVFRAVLEERKDDLKFFEKHVDNDVISRLE 306

Query: 268 NTVSNNFLRICYDDAI 283
           N ++++F +I Y DAI
Sbjct: 307 NFINSDFAQIDYTDAI 322


>gi|296131772|ref|YP_003639019.1| lysyl-tRNA synthetase [Thermincola sp. JR]
 gi|296030350|gb|ADG81118.1| lysyl-tRNA synthetase [Thermincola potens JR]
          Length = 489

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 27/256 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V L+G +   R  G   F +I+D  G  Q+    D    E  K      +  I G  
Sbjct: 51  GQEVTLAGRLMAKRGQGKAGFSNIQDLTGRIQLYTRLDDLGEEEFKRFSHLDIGDIIG-- 108

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES--------IRFKYR 129
                       +TG++    QK EI    +   L     R  PE         +R++ R
Sbjct: 109 ------------VTGKV-FKTQKGEISIWVKSYKLLCKSLRPLPEKWHGLKDVELRYRQR 155

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187
           ++DL  +   K + V R++II ++R  +    F+E  TP++   +    AR F+      
Sbjct: 156 YIDLIVNPEVKEVFVTRSKIIRAIRNYLDKLGFLEVETPMMHPIAGGATARPFITHHNAL 215

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  G ++ ++I   FR+E   +   P EF  L++  ++ + +
Sbjct: 216 DMDLY-LRIAPELYLKRLIVGGLEKVYEINRNFRNEGISTKHNP-EFTMLELYEAYADYE 273

Query: 248 DILNTMENVLRGVFEE 263
           D++   EN++  V +E
Sbjct: 274 DMMVLTENLVSTVAKE 289



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 28/37 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A Q G+PP GG+  GIDR+VMLL  + ++R+V LFP+
Sbjct: 448 ALQIGLPPTGGLGIGIDRLVMLLTDSASIRDVLLFPL 484


>gi|225868226|ref|YP_002744174.1| lysyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|225701502|emb|CAW98673.1| lysyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 497

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 109/242 (45%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    DS     ++I K       + ++G +M 
Sbjct: 65  IAGRLMTKRGKGKVGFAHLQDRQGQIQIYVRKDSVGDDNYDIFKKADLGDFIGVEGDIMR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A K+  LS +   PLP  F      E+I ++ R LDL   R 
Sbjct: 125 TD---------MGELSIKATKLTHLSKSLR-PLPEKFHGLTDIETI-YRKRHLDLISNRS 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +L +  V R+++I+ +R  +    F+E  TP+L   +   A    +     Q     L  
Sbjct: 174 SLER-FVTRSKMISEIRRYLDGLGFLEVETPVLHNEAGGAAARPFITHHNAQDIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  D++   E +
Sbjct: 233 APELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYEAYADYLDMMTLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFKAQAAAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|15800791|ref|NP_286805.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15830267|ref|NP_309040.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168751196|ref|ZP_02776218.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168757025|ref|ZP_02782032.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168762930|ref|ZP_02787937.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|168769928|ref|ZP_02794935.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168776214|ref|ZP_02801221.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168783976|ref|ZP_02808983.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168787362|ref|ZP_02812369.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|195939655|ref|ZP_03085037.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208815310|ref|ZP_03256489.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208822648|ref|ZP_03262967.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209397026|ref|YP_002269602.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217325811|ref|ZP_03441895.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254792130|ref|YP_003076967.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261227434|ref|ZP_05941715.1| asparaginyl tRNA synthetase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261256143|ref|ZP_05948676.1| asparaginyl tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291281931|ref|YP_003498749.1| Asparaginyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|20139877|sp|P58694|SYN_ECO57 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|12514105|gb|AAG55415.1|AE005283_2 asparagine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13360472|dbj|BAB34436.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187768340|gb|EDU32184.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188014709|gb|EDU52831.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188998770|gb|EDU67756.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189355907|gb|EDU74326.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189361160|gb|EDU79579.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189366782|gb|EDU85198.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|189372735|gb|EDU91151.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|208731958|gb|EDZ80646.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208738133|gb|EDZ85816.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209158426|gb|ACI35859.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209774698|gb|ACI85661.1| asparagine tRNA synthetase [Escherichia coli]
 gi|209774700|gb|ACI85662.1| asparagine tRNA synthetase [Escherichia coli]
 gi|209774702|gb|ACI85663.1| asparagine tRNA synthetase [Escherichia coli]
 gi|209774704|gb|ACI85664.1| asparagine tRNA synthetase [Escherichia coli]
 gi|209774706|gb|ACI85665.1| asparagine tRNA synthetase [Escherichia coli]
 gi|217322032|gb|EEC30456.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254591530|gb|ACT70891.1| asparaginyl tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290761804|gb|ADD55765.1| Asparaginyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320192584|gb|EFW67225.1| Asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320637799|gb|EFX07591.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320642924|gb|EFX12125.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320648381|gb|EFX17036.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320653697|gb|EFX21771.1| asparaginyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320659842|gb|EFX27398.1| asparaginyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320664311|gb|EFX31462.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|326338175|gb|EGD62004.1| Asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|326346152|gb|EGD69890.1| Asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
          Length = 466

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 109/277 (39%), Gaps = 48/277 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 63

Query: 76  LVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFK 127
            V+  +  T  + I+TG++  S    Q+ EI +   E+   V     YP      SI + 
Sbjct: 64  DVLRLT--TGCSVIVTGKVVASPGQGQQFEIQTSKVEVAGWVEDPDTYPMAAKRHSIEYL 121

Query: 128 YRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
                LR  T     V R R  +  ++      + F   STP++TAS  EGA +     R
Sbjct: 122 REVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF---R 178

Query: 186 VNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDP 225
           V+      LP+  Q                    Q      A    + +   P FR E+ 
Sbjct: 179 VSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENS 238

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            + R   EF+ L+ E++F   +DI    E +L+ VF+
Sbjct: 239 NTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFK 275



 Score = 37.0 bits (84), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+ +    +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|325496868|gb|EGC94727.1| asparaginyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 466

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 109/277 (39%), Gaps = 48/277 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 63

Query: 76  LVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFK 127
            V+  +  T  + I+TG++  S    Q+ EI +   E+   V     YP      SI + 
Sbjct: 64  DVLRLT--TGCSVIVTGKVVASPGQGQQFEIQASMVEVAGWVEDPDTYPMAAKRHSIEYL 121

Query: 128 YRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
                LR  T     V R R  +  ++      + F   STP++TAS  EGA +     R
Sbjct: 122 REVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF---R 178

Query: 186 VNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDP 225
           V+      LP+  Q                    Q      A    + +   P FR E+ 
Sbjct: 179 VSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENS 238

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            + R   EF+ L+ E++F   +DI    E +L+ VF+
Sbjct: 239 NTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFK 275


>gi|298712823|emb|CBJ48788.1| Asparaginyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 478

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 36/268 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
           +G  V + GWV   R      F++I D   +   QVV   D   +   + + +   + + 
Sbjct: 58  LGKTVAVKGWVRTKRDQKAFSFVEINDGSCMKGVQVVIPQDVPTYSAVERLTTGASVSVT 117

Query: 75  GLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPL--PVFGEREYPESIRFKYRFL 131
           G+V+    +        GQ  E+ AQ++ ++    E P   P+  +R   E +R     L
Sbjct: 118 GVVVESPGK--------GQRFEVKAQEVHVVG---ECPTEYPLQKKRHTLEFLR-GIAHL 165

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA----RDFLVPSRVN 187
             R +T+      R+ +  +       E F+   +PI+TAS  EGA    R   +PS V+
Sbjct: 166 RPRTNTIAAVARVRSALAQATHDFFREEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVS 225

Query: 188 Q------GS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           +      GS      F+  P       QL     A      +   P FR E+ ++ R   
Sbjct: 226 KVPTLEDGSTDYSQDFFGKPAFLTVSGQLSGETHACALGDVYTFGPTFRAENSQTTRHLA 285

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGV 260
           EF+ ++ EMSF +  D ++  E  ++ V
Sbjct: 286 EFWMIEPEMSFADLRDDMDNAEAFVKHV 313


>gi|239608737|gb|EEQ85724.1| asparaginyl-tRNA synthetase Slm5 [Ajellomyces dermatitidis ER-3]
          Length = 557

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 37/255 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC---FEIAKSVRSEWVLCIDG 75
           +R+ G++  VR      F +I D   I   Q +  P  A       A  +   W  C  G
Sbjct: 58  IRVQGFIRSVRKQKRFAFAEISDGSTIKSVQAILTPAQAARLSTGSAIDISGVWQPCPAG 117

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDL 133
              S               EL A +++I   A  E+   P F  R+ P  +R +  F  L
Sbjct: 118 KKQSH--------------ELHATEVKITGEADPEKYHSPDF-LRQIPH-LRLRTPFNSL 161

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ----- 188
                 + I +  ++ +S     +  NF++   P++T+S  EGA +    +  ++     
Sbjct: 162 LSRFRSECIFQLGQVFHSR----LGSNFVQVQPPLITSSDCEGAGEVFTVAPGDKVGDGE 217

Query: 189 -GSFYALPQAPQQYKQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
            G F+  P+      QL +   A+     + ++P FR E   + R   EFY L++EM+FV
Sbjct: 218 KGEFFRSPKYLTVSSQLHLEAYAAELGNVWTLSPTFRAEKSDTPRHLSEFYMLEVEMNFV 277

Query: 245 EQ-DDILNTMENVLR 258
              D + +T+E+++R
Sbjct: 278 HSLDSLTDTVESLIR 292


>gi|225549689|ref|ZP_03770654.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|225369649|gb|EEG99097.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 462

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 106/265 (40%), Gaps = 34/265 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF--EIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F  +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPEIYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +T       R +I   +        F   +TPI+T++  EGA +     RV+   F 
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMF---RVSTLKFN 182

Query: 193 ALPQA-------------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            L  A                     Q      A    + +   P FR E+  + R   E
Sbjct: 183 KLNNALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASE 242

Query: 234 FYQLDMEMSFVEQDDILNTMENVLR 258
           F+ ++ EM+F + +D +   E++L+
Sbjct: 243 FWMIEPEMAFYKLNDNIALAEDLLK 267


>gi|309792629|ref|ZP_07687090.1| lysyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308225351|gb|EFO79118.1| lysyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 489

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 2/147 (1%)

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           R + R+LDL  ++  ++I + R R I++MR  + A  F+E  TP+L       A      
Sbjct: 151 RHRQRYLDLIVNSERRDIFRARARTISTMRSVLDARGFVEVETPVLQPIYGGAAARPFTT 210

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                G    L  A + Y + L+  GF   ++I+  FR+E       P EF  ++   +F
Sbjct: 211 YHNQLGQNLYLRIATELYLKRLIVGGFPGVYEISKNFRNEGVDRSHNP-EFTMMECYQAF 269

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTV 270
            +  D+++ +E +LR +    + G  V
Sbjct: 270 ADYRDVMDLVEVMLREIALAVTGGTLV 296



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP GG+  GIDR+VM+L     +REV LFP
Sbjct: 448 ALMYGMPPTGGLGIGIDRLVMVLTDQPTIREVILFP 483


>gi|68058161|gb|AAX88414.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 502

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 111/275 (40%), Gaps = 38/275 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE 
Sbjct: 48  GKVAIGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYE------SEI 101

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           +    G  +  + + + +      +EL A+K+E+    E+    P+  +R    SI +  
Sbjct: 102 LRLTTGCSVIVTGKVVESPSEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLR 158

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV
Sbjct: 159 EVAHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RV 215

Query: 187 NQGSFYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPR 226
           +      LP++        Q +   +  L  SG            + +   P FR E+  
Sbjct: 216 STLDLENLPRSENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 275

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ ++ E++F    D     E++L+ VF
Sbjct: 276 TTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVF 310


>gi|315186436|gb|EFU20196.1| Lysine--tRNA ligase [Spirochaeta thermophila DSM 6578]
          Length = 324

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 11/150 (7%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYALPQA------ 197
           R R+++ +R    A + +E  TP L     PE     + P        +  P+A      
Sbjct: 10  RARLLSELRAFFRAHDHLEVDTPHLAPYLIPEA---HIRPFTTTHHPLHDTPRALSLLPS 66

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ + + L+A G+   FQI+  FRD +P S R   EF  L+   +    DD ++  E + 
Sbjct: 67  PELWMKHLLAQGYGDIFQISHVFRDAEPPSPRHSPEFTMLEWYTTGSTADDQISLTEELF 126

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
             +     +   +S  F R+  ++A  RY 
Sbjct: 127 ATLAHSL-DAPHLSPPFHRLTMEEAFTRYA 155



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 531 CGMPPH--GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
           C   PH   G+A G+DR++M L G K++R V  FP+S    +++
Sbjct: 280 CARIPHPTSGVALGVDRLLMYLTGEKDIRGVIFFPLSDTIEEIV 323


>gi|296231612|ref|XP_002761206.1| PREDICTED: lysyl-tRNA synthetase isoform 2 [Callithrix jacchus]
          Length = 424

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 6/163 (3%)

Query: 122 ESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--R 178
           +  R++ R+LDL   D + +  + R++II  +R  M    F+E  TP++    P GA  +
Sbjct: 93  KETRYRQRYLDLILNDFVRQKFITRSKIITYIRSFMDELGFLEIETPMMNII-PGGAVAK 151

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +
Sbjct: 152 PFITYHNELDMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCE 209

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
             M++ +  D++   E ++  +  +    N       R   DD
Sbjct: 210 FYMAYADYHDLMEITEKMVSALGMKLPETNLFETEETRKILDD 252



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 363 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 398


>gi|146099196|ref|XP_001468582.1| asparaginyl-trna synthetase [Leishmania infantum]
 gi|134072950|emb|CAM71669.1| putative asparaginyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 890

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 115/309 (37%), Gaps = 54/309 (17%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS------ACFEIAK 63
           G+L     G+ V + GW HRVR    + F+ +RD  G  Q V +  +      +C  I  
Sbjct: 451 GELPSHKEGACVYVVGWAHRVRHQSRMSFVVLRDGTGFIQCVFDGSTEPFHRESCVAIRG 510

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R E        +       +N   + G    S   IE +  AE     ++ +R     
Sbjct: 511 TLRHE--PKAKSELQPPMELHVNEYAVVGD---SDGTIETVITAESSVDKLYDQRHV--- 562

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                    + R TL  +++K R  ++   R    +  + E + P L  +  EG      
Sbjct: 563 ---------VVRGTLASSVLKVRHELLRVFREHFWSHQYYEVTPPTLVQTQVEGGSTLF- 612

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
              +  G    L Q+ Q Y + + AS     +   P +R E  ++ R   EF  L+ E  
Sbjct: 613 -EVLYYGEKAYLTQSSQLYLESVTAS-LGNVYCCMPSYRAERSKTKRHLSEFTHLEAEYD 670

Query: 243 FVEQDDILNTME----NVLRGVFEEFS--------------NGN---------TVSNNFL 275
               +D+LN +E     V+R V E                 NGN         T    F 
Sbjct: 671 VCSFEDLLNHLEGMFCTVIRTVIERVGDLVAMLNPSQLIDPNGNVRDPANYKFTPKRPFR 730

Query: 276 RICYDDAIR 284
           R+ Y DAI+
Sbjct: 731 RLRYADAIQ 739



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 15/93 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVV-----ENRFGGLYRAFQCGMPPH 536
           D++  G  E+  G +R +  + +L A+   G+          + R+GG          PH
Sbjct: 805 DVLAPGIGEVLGGSMRMYKYDELLDAYKREGLDASTYYWYTDQRRYGGA---------PH 855

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           GG   G++R+++ +L   +V++  L+P     C
Sbjct: 856 GGFGLGVERLLVWMLNLDSVKDACLYPRYMGRC 888


>gi|242785470|ref|XP_002480601.1| aspartyl-tRNA synthetase Dps1, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218720748|gb|EED20167.1| aspartyl-tRNA synthetase Dps1, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 554

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R +  + + ++    G+  +     F     AF+ G PPH G   
Sbjct: 467 YDFFMRGEEIMSGAQRINDVKELEESMIKKGVDPK--SEGFEDYLNAFRQGCPPHAGGGL 524

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIVM  LG  NVR  +LFP
Sbjct: 525 GLNRIVMFFLGLPNVRLATLFP 546



 Score = 41.2 bits (95), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 92/237 (38%), Gaps = 50/237 (21%)

Query: 47  ITQVVANPDSACFEIAKSVRSEWVLCIDGLVM-SRSAETINANI------------ITGQ 93
           I QV          IA +  +E  L I  + M + +A+ +   +            I G+
Sbjct: 160 IVQVTGIAKKPAVPIASATLTELELQIKKIYMIAEAAQVLPMQVKDAERPPPLTDGIEGE 219

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
            EL A+ + ++++                  R   R LDL+ +T             S  
Sbjct: 220 PELDAEGVPVVTL----------------KTRLDNRVLDLQTET-------------SQA 250

Query: 154 CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA---LPQAPQQYKQLLMASGF 210
              I+    +  T  +  S   GAR ++  S+++  S      L Q+PQ  KQ+ +A   
Sbjct: 251 ITWISSGVAQLFTEFMLKS---GAR-WIFSSKLSGSSTKEEGYLAQSPQLMKQMAIAGDM 306

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
           +  F++ P FR E+  + R   EF  LD E +F     ++L+  E +L  +  E   
Sbjct: 307 ESVFEVGPVFRAENSNTHRHLTEFTGLDFEKTFRHHYHEVLDFAEELLVFILTELKE 363


>gi|302878949|ref|YP_003847513.1| lysyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302581738|gb|ADL55749.1| lysyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 507

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 14/207 (6%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRII 149
           TG++ +   ++ +L+ +   PLP        +  +++ R+LDL  +   +++ V RT+II
Sbjct: 136 TGELSVRVSQVRLLTKSLR-PLPEKFHGLADQEQKYRQRYLDLITNPDARHVFVTRTKII 194

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA-LPQAPQQYKQLLMAS 208
            ++R   I   ++E  TP++  S P GA      +  N       L  AP+ Y + L+  
Sbjct: 195 QAIREFFIHHGYLEVETPMM-HSIPGGASAKPFETHHNALDMQMFLRIAPELYLKRLVVG 253

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GF++ F+I   FR+E   +   P EF  L+   ++ + + ++   E +LR V  +     
Sbjct: 254 GFEKVFEINRNFRNEGLSTRHNP-EFTMLEFYEAYRDYNYLMGFTEKLLREVARKVLGTT 312

Query: 269 TVSNN---------FLRICYDDAIRRY 286
            VS           F R+    AI++Y
Sbjct: 313 IVSYQGRELDLGKPFHRLTMVQAIQKY 339



 Score = 45.4 bits (106), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPH 536
           +++L   G E+A+G    + +E     F    I+KE  +     +     RA + G+PP 
Sbjct: 416 RFELFVLGRELANGFSELNDAEDQEARFDAQVIAKEAGDEEAMFKDNDYIRALEYGLPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR++M+L  + ++R+V LFP
Sbjct: 476 AGEGIGIDRLIMMLTDSSSIRDVILFP 502


>gi|168009856|ref|XP_001757621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691315|gb|EDQ77678.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 501

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 134/341 (39%), Gaps = 64/341 (18%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEI--AKSVR 66
           D G+  VG  + + GWV   R      F+++ D   ++  Q V   D   ++   A  V 
Sbjct: 35  DGGLGRVGETMVVRGWVRTCRIQKTFSFIEVNDGSAVSNLQTVVLSDVEGYDKIEAGQVN 94

Query: 67  SEWVLCIDG-LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           +   + ++G LV S+ A+         ++EL A K+ ++   +    P+  ++   E +R
Sbjct: 95  TGASVAVEGVLVESKGAKQ--------KVELKATKLTLIGGTDPASFPIQKKKLTREYLR 146

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-----F 180
                L  R +T       RT +  +       + F+  ++PI+TAS  EGA +      
Sbjct: 147 -SVAHLRPRTNTFGAVARVRTALAYATHQFFREQGFVWVASPIITASDCEGAGEQFCVTT 205

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLL-----------------------MASGFDRYFQIA 217
           L+PS  ++ +   + Q P     L+                        A+     +   
Sbjct: 206 LIPSS-HEDTKTPVSQVPTTKDGLIDWSQDFFGKPAFLTVSGQLNGETYATALCDIYTFG 264

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDI---LNTMENVLRGVFE------EFSN- 266
           P FR E+  + R   EF+ ++ E++F + +DD+      ++ V+R V +      EF N 
Sbjct: 265 PTFRAENSNTTRHLAEFWMIEPELAFADLKDDMACATAYLQYVVRYVLDNCMEDLEFFNQ 324

Query: 267 ----------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
                      N V   F+ + Y +A+      K     P+
Sbjct: 325 WVEKGIITRLTNVVEKPFVHVTYTEAVELLQKSKKKFEFPV 365



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G  R    EV+ +    +G+SKE     +       + G  PH G   G +R+V  
Sbjct: 424 ELIGGSQREERLEVLERRIEELGLSKE----SYWWYLDLRRYGSVPHAGFGLGFERLVQF 479

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
             G +N+R+V  FP + N  + 
Sbjct: 480 STGIENIRDVIPFPRTPNSAEF 501


>gi|119025394|ref|YP_909239.1| lysyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|118764978|dbj|BAF39157.1| lysyl-tRNA synthetase 1 [Bifidobacterium adolescentis ATCC 15703]
          Length = 587

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 108/264 (40%), Gaps = 33/264 (12%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I + A + PLP    +E  E  R +  ++ +  D   +N+V+ R++ +
Sbjct: 210 TGELSVFATEWAIAAKALQ-PLPAL-HKELNEDTRTRKPYIGMIADEKIRNMVRNRSKAV 267

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R      +F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 268 ASLRKTFADHDFLEVETPMLQTVHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 326

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           G DR F+I   FR+E   +   P        E + VE               ++ + N +
Sbjct: 327 GIDRVFEINRDFRNEGVDATHAP--------EFTMVE--------------AYQAYGNYD 364

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           T+     ++  D A+  +G+ K      + + + TE+    E++  S   S++       
Sbjct: 365 TIGALVKQLVQDTAMDVFGSHK------VTLLDGTEYDFGGEWKTISMYDSLSEALGEEI 418

Query: 329 IPAKGGGGNRAFCDRMNEWARSQG 352
           +P  G        + + E A   G
Sbjct: 419 VPNGGPDNPGTSVEHLGEIADKLG 442



 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 496 KWDLYVRGFELATG--YSELNDPVVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 553

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 554 PAGGMGMGIDRLLIALTGA-TIRETITFPL 582


>gi|145641686|ref|ZP_01797263.1| asparaginyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145273733|gb|EDK13602.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 345

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 38/275 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE 
Sbjct: 13  GKVAIGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYE------SEI 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           +    G  +  + + + +      +EL A+K+E+    E+    P+  +R    SI +  
Sbjct: 67  LRLTTGCSVIVTGKVVESPAEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLR 123

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV
Sbjct: 124 EVAHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RV 180

Query: 187 NQGSFYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPR 226
           +      LP+         Q +   +  L  SG            + +   P FR E+  
Sbjct: 181 STLDLENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 240

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ ++ E++F    D     E++L+ VF
Sbjct: 241 TTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVF 275


>gi|229815844|ref|ZP_04446168.1| hypothetical protein COLINT_02897 [Collinsella intestinalis DSM
           13280]
 gi|229808539|gb|EEP44317.1| hypothetical protein COLINT_02897 [Collinsella intestinalis DSM
           13280]
          Length = 661

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GGI  GIDR+VMLL  + ++R+V LFP
Sbjct: 459 RALEYGMPPAGGIGIGIDRVVMLLTNSTSIRDVLLFP 495



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 101/209 (48%), Gaps = 18/209 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEIAKSVRSEWVLCIDGLV 77
           V + G V   R  G I+F+ +RD     Q+   V + +   +E+ K +    ++   G  
Sbjct: 66  VTIGGRVVAKRGQGKIMFIVVRDPSADIQLFCRVNDVEEESWEVLKELDLGDIVQATGQ- 124

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRD 136
           M+R+          G++ ++ +  ++LS A   PLP        +  R++ R++DL   +
Sbjct: 125 MTRTKR--------GELSIAPRTAQLLSKAVR-PLPEKFHGLSDKETRYRQRYVDLIVNE 175

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYAL 194
            + +   KR+ I+++ R  M    ++E  TPIL +      A+ F+   + +NQ ++  +
Sbjct: 176 DVRETFRKRSAIVSAFRRYMEDNGYMEVETPILQSIQGGATAKPFITHFNALNQENYLRI 235

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             A + + + L+  G++R F+I   FR+E
Sbjct: 236 --ATELHLKRLLVGGYERVFEIGRIFRNE 262


>gi|332024809|gb|EGI64997.1| Putative asparaginyl-tRNA synthetase, mitochondrial [Acromyrmex
           echinatior]
          Length = 470

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/327 (21%), Positives = 126/327 (38%), Gaps = 70/327 (21%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHY--GITQVVA----NPDSACFEIAKSVRSEWV 70
           +G   ++ GWV  +R     +F+DI D     + QVV      PD   +  + SV  E  
Sbjct: 36  IGKPAKVQGWVRALRKMKDTVFVDISDGSTCKMLQVVVPKVIKPDDLRYGSSISVEGELF 95

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP--LPVFGEREY-PESIRFK 127
           L  +G                 + EL A ++ ++     L    P    + Y PE IR  
Sbjct: 96  LAPNG-----------------KTELRATEVHVIGACNVLEDGYPFAPRKTYDPEYIR-- 136

Query: 128 YRFLDLRRDT------LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            ++L LR  T      L    +  T I + +R R     F+   TP+LT++  EGA +  
Sbjct: 137 -QYLHLRPRTRGFSSLLRLRDLATTMITDHLRDR----GFLSVHTPMLTSNDCEGAGEVF 191

Query: 182 VPSRVNQGSFYALPQAPQQYKQLL-----------------MASGFDRYFQIAPCFRDED 224
           +    ++    ++ +  Q   ++                  +A    + +   P FR E+
Sbjct: 192 LVKPQSKEILKSMKKEGQSENEIYFDTIAFLAVSGQLHLEAVARALTKVYTFGPTFRAEN 251

Query: 225 PRSDRLPGEFYQLDMEMSFVEQ---------DDILNTMENVLRGVFEEFSNGNT-----V 270
            +S     EFY L++E++F+ +           +   +E ++     +  + N      +
Sbjct: 252 SKSRLHLSEFYMLEVEIAFITRIEELMEEVELLVKRVIERMIEKGASDLHSINAPELQWL 311

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +  F+R+ Y+DA          L+ PI
Sbjct: 312 NKTFVRLTYEDAFNVLNNHANRLQQPI 338


>gi|284007569|emb|CBA73110.1| asparaginyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 466

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 125/328 (38%), Gaps = 59/328 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLC- 72
           VG  V + GWV   R    G  FL I D   +   Q + N +   +E    V      C 
Sbjct: 16  VGEEVTVRGWVRTRRDSKAGFSFLAIYDGSCFNPLQAIVNKELDNYE--NDVLHLTTGCS 73

Query: 73  --IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYR 129
             + G+V     +         Q ELSA ++ ++ + E     P+  +R   E +R    
Sbjct: 74  VEVTGIVKPSEGQG-------QQFELSATQVVVVGIVENPDSYPMAAKRHSVEYLR---E 123

Query: 130 FLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS--- 184
              LR  T     + R R  +  ++      E ++  STPI+TAS  EGA +    S   
Sbjct: 124 VAHLRPRTNLIGAIARVRNTLAQAIHRFFHEEGYLWVSTPIITASDTEGAGEMFRVSTLD 183

Query: 185 -----RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                R  +G       F+   A      Q      A    + +   P FR E+  + R 
Sbjct: 184 LQNIPRTEKGDINFDKDFFGREAFLTVSGQLNGEAYACALSKIYTFGPTFRAENSNTSRH 243

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFE--------------EFSNGNTVS----- 271
             EF+ ++ E++F + +DI +  E +L+ VF+              E  +   +S     
Sbjct: 244 LAEFWMVEPEVAFADLNDIASLAEKMLKYVFKSVLQERHDDLTFFAERIDKEVISRLEKF 303

Query: 272 --NNFLRICYDDAIRRYGTDKPDLRNPI 297
             ++F +I Y DAI+          NP+
Sbjct: 304 IVSDFAQIDYTDAIKVLEQSGKTFENPV 331


>gi|167470510|ref|ZP_02335214.1| lysyl-tRNA synthetase [Yersinia pestis FV-1]
          Length = 276

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 11/206 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+  + D     +      +W L   G ++  
Sbjct: 68  VTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYNEEFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 RGKLFKTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  K R+++++ +R  M+ + F+E  TP++    P GA  R F+          Y L  A
Sbjct: 182 HTFKVRSQVMSGIRSFMVEKGFMEVETPMMQVI-PGGASARPFVTHHNALDIDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDE 223
           P+ Y + L+  GF+R F+I   FR+E
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNE 265


>gi|317491485|ref|ZP_07949921.1| asparaginyl-tRNA synthetase [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316921032|gb|EFV42355.1| asparaginyl-tRNA synthetase [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 466

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 110/273 (40%), Gaps = 32/273 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G + V + V + GWV   R    GI FL + D   +   Q V N     +E      S+ 
Sbjct: 12  GRAAVDTEVTVRGWVRTRRDSKAGISFLAVYDGSCFNPLQAVVNNSLPNYE------SDV 65

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           +    G  +  + + + +       EL A +++++   E+    P+  +R    SI +  
Sbjct: 66  LRLTTGCSLEVTGKVVPSPGEGQSFELQATEVKVVGWVEDPDTYPMAAKRH---SIEYLR 122

Query: 129 RFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPS-- 184
               LR  T     V R R  +     R   EN +   STP++TAS  EGA +    S  
Sbjct: 123 EVAHLRPRTNLIGAVARVRHTLAQAIHRYFHENGYFWVSTPLITASDTEGAGEMFRVSTL 182

Query: 185 ------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                 R ++G       F+   A      Q      A    + +   P FR E+  + R
Sbjct: 183 DMENLPRTDEGKVDFGEDFFGREAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSR 242

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
              EF+ ++ E++F + +DI    E +L+ VF+
Sbjct: 243 HLAEFWMVEPEVAFADLNDIAGVAEGMLKYVFQ 275


>gi|15616965|ref|NP_240178.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134959|sp|P57441|SYN_BUCAI RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|25293055|pir||H84971 asparagine-tRNA ligase (EC 6.1.1.22) [imported] - Buchnera sp.
           (strain APS)
 gi|10039030|dbj|BAB13064.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 466

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/329 (22%), Positives = 128/329 (38%), Gaps = 57/329 (17%)

Query: 17  VGSFVRLSGWV-HRVRPHGGIIFLDIRDH--YGITQVVANPDSACF--EIAKSVRSEWVL 71
           V S + + GWV +R     G  F+ I D   +   QV+AN     +  EI        V+
Sbjct: 16  VNSLITVCGWVRNRRSSKSGFSFITIYDGSCFNSIQVIANNTLPNYYKEILHLTTGCSVM 75

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRF 130
               L++S   +         + E+  +KI++L   E     P+  ++   E +R     
Sbjct: 76  LSGKLILSIGDKQ--------KYEIQLKKIKVLGWVENPETYPISSKKHSTEYLR---EV 124

Query: 131 LDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             LR  T     + R R  I++S+      E +    TPI+T+ + EGA +    S ++ 
Sbjct: 125 AHLRSRTNLIGAIARIRNYILHSLHHFFYKEKYYWVPTPIITSLNTEGAGEMFRVSTLDM 184

Query: 189 GSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
            +      +   +K+        L  SG            + +   P FR E+  + R  
Sbjct: 185 ENIPKNLDSSVDFKKDFFGKESFLTVSGQLNLETYACSLSKVYTFGPTFRAENSNTGRHL 244

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSNGNTVSN----- 272
            EF+ L++E +F + +DI +  E +L+ V               E ++N N V       
Sbjct: 245 AEFWMLEVESAFTDLNDISDFAECMLKYVCKSLLKKCITDINFLENYTNSNIVDRLEKFL 304

Query: 273 --NFLRICYDDAIRRYGTDKPDLRNPIIM 299
             +F+RI Y + I      K    N + +
Sbjct: 305 LVDFVRIDYVEVINILLDSKIKFNNSVFL 333


>gi|294055084|ref|YP_003548742.1| lysyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293614417|gb|ADE54572.1| lysyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 505

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 6/99 (6%)

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF-SNVGISKEVVENRFGG 524
           +  +  +D  +I  F+  L  NG EIA      +   +  + F   VG   E V++    
Sbjct: 394 LAKITQDDETTIDVFE--LCINGQEIAPAYSEQNDPIIQKKMFLEQVG---EEVQDMDTD 448

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              A + GMPP GG+  GIDR+++LL GA+++R+  LFP
Sbjct: 449 FITALEHGMPPAGGMGLGIDRLIILLTGAESIRDTILFP 487



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 12/248 (4%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLV 77
           + V+++G +   R  G   F+ I+D  G  Q     D    E+ +   + +   +D G +
Sbjct: 60  ALVKIAGRITVFRVMGKASFIKIQDREGPIQCYVTRD----ELPEGEYNTYFKKLDLGDI 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +            TG+I + A K  ++S +   PLP        +   ++ R+LDL  + 
Sbjct: 116 IGIEGRLFKTK--TGEITVRASKYTLVSKSLR-PLPEKWSGLKDDDKIYRQRYLDLIVNQ 172

Query: 138 LHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
             +N  K R  II  MR  +   +F E  TP+L   +    AR F+         FY + 
Sbjct: 173 ESRNRFKQRADIIKEMRKYLWERDFQEVETPVLQGVAGGAAARPFMTHFNALDCRFY-MR 231

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + Y + ++  G DR F+I   FR+E   S R   EF  L++  ++ +   ++   + 
Sbjct: 232 IALELYLKRMLVGGEDRVFEIGRVFRNEG-LSRRHNPEFTMLELYQAYTDFRGMMELTQG 290

Query: 256 VLRGVFEE 263
           +++ V E+
Sbjct: 291 LIQHVAEK 298


>gi|149193730|ref|ZP_01870828.1| lysyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135683|gb|EDM24161.1| lysyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 498

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 115/263 (43%), Gaps = 15/263 (5%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G V  +R  G   F  I D  GI QV  + +         +  ++ L    L +    
Sbjct: 60  VAGRVKFLRLMGKAAFFKIEDESGILQVYMSKND--------LGDKFNLLKKTLEVGDIV 111

Query: 83  ETINANIIT--GQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
           E I    +T  G++ + A  + IL+ A   LP    G ++     R +Y  + + +DT  
Sbjct: 112 EVIGYPFVTKTGELSIHADDVRILTKAIHPLPEKFHGLQDVETKYRQRYLDMIMNKDTRD 171

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  + R++I++ +R   + + F+E  TP+L T      AR F+            L  AP
Sbjct: 172 RFKL-RSQIVSLVREFFLKKGFLEVETPMLHTVVGGANARPFMTHHNALDIDM-NLRIAP 229

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+  GF+  F++   FR+E       P EF  ++   ++   +D++   + +  
Sbjct: 230 ELFLKRLIVGGFEAVFELNRNFRNEGIDHTHNP-EFTMIEFYWAYHTMEDLMKLTKELFD 288

Query: 259 GVFEEFSNGNTVSNNFLRICYDD 281
            +FE+ +    +    + I +DD
Sbjct: 289 FLFEKLNLPKKLEYGDMVIDFDD 311



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A Q GMPP  G   GIDR+VMLL  + ++++V LFP
Sbjct: 451 KALQYGMPPTAGEGIGIDRLVMLLTNSHSIKDVILFP 487


>gi|34533120|dbj|BAC86604.1| unnamed protein product [Homo sapiens]
          Length = 423

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 7/163 (4%)

Query: 122 ESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--R 178
           +  R++ R+LDL   D + +  + R++II  +R  +    F+E  TP++    PEGA  +
Sbjct: 93  KETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PEGAVAK 151

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +
Sbjct: 152 PFITYHNELDMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCE 209

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
             M++ +  D++   E ++ G+  +    N       R   DD
Sbjct: 210 FYMAYADYHDLMEITEKMVSGMV-KLPETNLFETEETRKILDD 251



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 362 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 397


>gi|256848392|ref|ZP_05553835.1| lysyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256714990|gb|EEU29968.1| lysyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 499

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VML+  AK++R+V LFP
Sbjct: 456 ALEYGMPPTGGLGVGIDRLVMLMTDAKSIRDVLLFP 491



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 28/281 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F D+ D  G  Q     D    E  +  +   +    G+    
Sbjct: 62  VTIAGRMIAKRGSGKASFADLLDRGGKIQFYVRQDVVGEETYQLFKDSDIGDFWGI---- 117

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--RRDT 137
           + + I   +  G++ + A+K+  L+ A   LP    G ++ PE + ++ R+LDL   RD+
Sbjct: 118 TGDVIKTRM--GELTIRARKMTFLTKALRPLPDKYHGLQD-PELV-YRQRYLDLITNRDS 173

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
             +     T+II ++R  M + +F E  TPIL   +S   AR F+          Y    
Sbjct: 174 FER-FQTWTKIIKAIRNYMDSNDFTEVETPILENVASGAEARPFITHHNALDIDMYMRIA 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
              + K+L++  G +R +++   FR+E  DP  +    EF  ++   ++ + +D++   E
Sbjct: 233 TELRLKRLIVG-GMERVYELGRIFRNEGMDPHHN---PEFDTMETYAAYFDFNDVMQETE 288

Query: 255 NVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286
            + +   +  S+   V         S  F R+   DAI+++
Sbjct: 289 GIFKTAAKVVSDDLKVNYQGTELDFSKPFERMHMVDAIKKF 329


>gi|261204059|ref|XP_002629243.1| asparaginyl-tRNA synthetase Slm5 [Ajellomyces dermatitidis
           SLH14081]
 gi|239587028|gb|EEQ69671.1| asparaginyl-tRNA synthetase Slm5 [Ajellomyces dermatitidis
           SLH14081]
          Length = 557

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 37/255 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC---FEIAKSVRSEWVLCIDG 75
           +R+ G++  VR      F +I D   I   Q +  P  A       A  +   W  C  G
Sbjct: 58  IRVQGFIRSVRKQKRFAFAEISDGSTIKSVQAILTPAQAARLSTGSAIDISGVWQPCPAG 117

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDL 133
              S               EL A +++I   A  E+   P F  R+ P  +R +  F  L
Sbjct: 118 KKQSH--------------ELHATEVKITGEADPEKYHSPDF-LRQIPH-LRLRTPFNSL 161

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ----- 188
                 + I +  ++ +S     +  NF++   P++T+S  EGA +    +  ++     
Sbjct: 162 LSRFRSECIFQLGQVFHSR----LGSNFVQVQPPLITSSDCEGAGEVFTVAPGDKVGDGE 217

Query: 189 -GSFYALPQAPQQYKQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
            G F+  P+      QL +   A+     + ++P FR E   + R   EFY L++EM+FV
Sbjct: 218 KGEFFRSPKYLTVSSQLHLEAYAAELGNVWTLSPTFRAEKSDTPRHLSEFYMLEVEMNFV 277

Query: 245 EQ-DDILNTMENVLR 258
              D + +T+E+++R
Sbjct: 278 HSLDSLTDTVESLIR 292


>gi|297566644|ref|YP_003685616.1| lysyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296851093|gb|ADH64108.1| lysyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 503

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/298 (20%), Positives = 125/298 (41%), Gaps = 27/298 (9%)

Query: 2   HRY-RTHSCGDL---------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           +RY +THS   +         G    G  VR++G +   R  G   F  ++D  G  Q+ 
Sbjct: 28  YRYDKTHSAAQILAAHPEPQPGQEFPGEKVRMAGRLMTFRHMGKASFAHLQDESGRIQIY 87

Query: 52  ANPD-SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQK-IEILSVAEE 109
              D +  +++ K +    ++ ++G V             TG++ +  ++ + ++     
Sbjct: 88  LARDLTERYDLLKKLDIGDIVGVEGTVFVTK---------TGEVTIKVERWLPLVKSLHP 138

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPI 168
           LP    G ++     R++ R+LDL ++   + + + R+R+   +R  +    F+E   P 
Sbjct: 139 LPDKWHGIKDL--ETRYRQRYLDLIQNPEVREVFRIRSRVTRYIRDYLTDRGFLEVEGPT 196

Query: 169 L-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L   +    AR F          FY L  A + + + L+  GF++ F+I   +R+E    
Sbjct: 197 LQVVAGGTEARPFKTYHNALNHEFY-LRIALELHLKRLLVGGFEKVFEIGRNYRNEGISH 255

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
              P EF  L+   ++ +  D++  +E++L G+         +      I +    RR
Sbjct: 256 KHNP-EFTMLEAYWAYADYTDMMALVEDMLSGMVASIHGTTKIRYGEHEIDFATPFRR 312



 Score = 44.7 bits (104), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 25/37 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  GIDR+ MLL    ++R+V LFP+
Sbjct: 449 ALEYGMPPAAGMGLGIDRLTMLLTDQHSIRDVILFPL 485


>gi|226309769|ref|YP_002769663.1| lysyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226092717|dbj|BAH41159.1| lysyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 506

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 113/253 (44%), Gaps = 27/253 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCIDGLV 77
           V ++G +   R  G   F  + D  G  Q+    D+   E++K      +   + + G+V
Sbjct: 71  VTIAGRLMAKRGMGKASFAQLLDRSGQIQIYVRQDTVGEELSKVFDLADIGDMIGVTGVV 130

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL--- 133
                        TG++ + A+++  L+ +   LP    G ++     R++ R++DL   
Sbjct: 131 FKTK---------TGELSVKAKELSYLTKSLRPLPEKYHGLKDI--ETRYRKRYVDLIVN 179

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
              RDT     + R+RI+ SMR  +    ++E  TP L A +    AR F+         
Sbjct: 180 PEVRDTF----ITRSRILTSMRRYLDNLGYLEVETPTLHAIAGGASARPFITHHNALDMQ 235

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + + + L+  G ++ ++I   +R+E   +   P EF  +++  ++ +  DI+
Sbjct: 236 LY-MRIAIELHLKRLIVGGLEKVYEIGRVYRNEGISTRHNP-EFTMIELYEAYADYQDIM 293

Query: 251 NTMENVLRGVFEE 263
           +  E ++  + +E
Sbjct: 294 SLTEEMVAHIAQE 306



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP  +N
Sbjct: 465 ALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPHMRN 504


>gi|28377434|ref|NP_784326.1| lysyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254555617|ref|YP_003062034.1| lysyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300768967|ref|ZP_07078858.1| lysine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308179647|ref|YP_003923775.1| lysyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|38258343|sp|Q88Z28|SYK_LACPL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|28270266|emb|CAD63167.1| lysine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254044544|gb|ACT61337.1| lysyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300493488|gb|EFK28665.1| lysine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308045138|gb|ADN97681.1| lysyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 499

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 118/270 (43%), Gaps = 21/270 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F DI D  G  Q+    D      + I K       L I G V  
Sbjct: 64  IAGRMLAKRGKGKVGFADIWDRSGKMQLYIRKDVVGEDTYHIFKRSDIGDFLGITGQVFK 123

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ +    +  LS A   PLP  F   +  E I ++ R+LDL   RD
Sbjct: 124 TD---------FGELTIKVTGLTFLSKALR-PLPDKFHGLQNVEQI-YRQRYLDLISNRD 172

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
           +  +  +KRT+II+++R  +  + F E  TP+L   +    AR F+          Y L 
Sbjct: 173 SFDR-FLKRTKIISAIRHHLDDQGFTEVETPMLHNQAGGAAARPFVTHHNALNIDLY-LR 230

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + + + L+  G ++ ++I   FR+E    +  P EF  ++  +++ +  D++   E 
Sbjct: 231 IALELHLKRLIVGGMEKVYEIGRVFRNEGMDREHNP-EFTMMETYVAYFDFHDVMAETEG 289

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           + +   +  ++   V+ +  ++ ++   ++
Sbjct: 290 IFKAAAQAVTDDGIVTYHDQKVDFNQPFKQ 319



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VML+  A ++R+V LFP
Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLMTDADSIRDVLLFP 491


>gi|308160927|gb|EFO63393.1| Asparaginyl-tRNA synthetase [Giardia lamblia P15]
          Length = 548

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 103/251 (41%), Gaps = 27/251 (10%)

Query: 25  GWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKS-VRSEWVLCIDG-LVMSRS 81
           GW HRVR     + F+ +RD  G  Q+V N        A++ +R+E  +   G LV  + 
Sbjct: 124 GWCHRVRISSPKLAFVVLRDGTGYCQLVLNEACMATRTAQTMLRTEAAVQAVGILVADKR 183

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYPES---IRFKYRFLDLRR 135
           A+        G  E+     +I+        P  GE   R  PES    R + R L  R 
Sbjct: 184 AQ--------GGYEIQCLYFDIIG-------PSSGEFETRITPESGPDARARERHLIHRG 228

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +     +  R RI+ + R     + + E + P +  +  EG           + ++  L 
Sbjct: 229 EHGSAILKARGRILRAFRNHFYFKGWTEVTPPTIVNTECEGGSSLFRVDFYGEDAY--LT 286

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+ Q Y + ++ +  D Y  I P FR E   + R   EF  L+ E  F+    +L  +E+
Sbjct: 287 QSSQLYLESVLPALGDVYC-ILPSFRAEKSNTRRHLSEFTHLETEHPFITFSALLGIIED 345

Query: 256 VLRGVFEEFSN 266
            +  V  E  N
Sbjct: 346 FVISVVTELKN 356



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G +R    E   +AF + G+  E    R+     + + G  PHGG+  G+
Sbjct: 465 LVPTVGEIVGGSMRKWTYEDTYKAFVDAGMPIE----RYYWYLDSRKFGGCPHGGMGLGL 520

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R +  LLG   VR+  L+P +
Sbjct: 521 ERFICWLLGIYTVRDTVLYPRA 542


>gi|303328113|ref|ZP_07358552.1| lysine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302861939|gb|EFL84874.1| lysine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 527

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/291 (19%), Positives = 121/291 (41%), Gaps = 33/291 (11%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCIDGLVMS 79
           ++G +  +R  G + F  + D  G  Q  A+    D   ++I K +    ++ + G +  
Sbjct: 93  IAGRIVSLRSFGKVAFFHLMDQSGRIQCYASREHLDEETYKIVKKLDVGDIVGVSGHLFR 152

Query: 80  RSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                      TG++ ++ + +++++ +   LP    G ++     R++ R++DL     
Sbjct: 153 TK---------TGELTIACRSLKLITRSMRPLPEKYHGLKDM--ETRYRQRYVDLIVTPR 201

Query: 139 HKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF---YAL 194
            + I  KR+ I+   R  M    F+E  TPI+    P        P + +  +      L
Sbjct: 202 AREIFAKRSLIVREFRRFMEEHGFMEVETPIM---QPLAGGATAKPFKTHHNALDLDLFL 258

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF++ F++   FR+E   +   P EF   +   ++   +D++N  E
Sbjct: 259 RIAPELYLKRLLVGGFEKVFELNRSFRNEGIDTRHNP-EFTMCEFYWAYATFEDLMNFTE 317

Query: 255 NVLRGVFEEFSNGNTVS----------NNFLRICYDDAIRRYGTDKPDLRN 295
            +   +         V+           ++ R+ + D++   G   PD  N
Sbjct: 318 KLFAHLAMAACGTTVVTYQGQEIDLTPGHWKRLSFYDSLTEIGGHSPDFYN 368



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL  + ++REV LFP+
Sbjct: 485 RALEYGMPPAAGQGVGIDRLVMLLTDSASIREVILFPL 522


>gi|307718950|ref|YP_003874482.1| lysyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306532675|gb|ADN02209.1| lysyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 350

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 5/147 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASS-PEGA-RDFLVPSRVNQGS--FYALPQAPQQ 200
           R R+++ +R    A + +E  TP L     PE   R F        G+    +L  +P+ 
Sbjct: 36  RARLLSELRAFFRAHDHLEVDTPHLAPYLIPEAHIRPFTTTHHPLHGTPRTLSLLPSPEL 95

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           + + L+A G+   FQI+  FRD +P S R   EF  L+   +    DD ++  E +   +
Sbjct: 96  WMKHLLAQGYGDIFQISHVFRDAEPPSPRHSPEFTMLEWYTTDSTADDQISLTEELFATL 155

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYG 287
                +   +S  F R+  ++A  RY 
Sbjct: 156 AHSL-DAPHLSPPFHRLTMEEAFTRYA 181



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 15/33 (45%), Positives = 23/33 (69%)

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           P  G+A G+DR++M + G K++R V  FP+S N
Sbjct: 312 PTSGVALGVDRLLMYITGEKDIRGVIFFPLSDN 344


>gi|268679216|ref|YP_003303647.1| lysyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617247|gb|ACZ11612.1| lysyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 506

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 104/238 (43%), Gaps = 16/238 (6%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKS-VRSEWVLCIDGLVMSR 80
           G +  +R  G   F  I D +GI Q+  + +S   A F+ AK  +    ++ + G     
Sbjct: 63  GRIKFLRHMGKAAFAKIEDEHGILQIYFSRESIGEAWFDEAKKLIEVGDIITVSGFPFVT 122

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LH 139
                     TG++ L  + ++I +    +PLP        + +R++ R+LD+  ++ + 
Sbjct: 123 K---------TGELSLHVKALDI-ATKSIIPLPEKFHGLQDKELRYRKRYLDMIMNSDVR 172

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           K    R++I++ +R      +F+E  TP++   +        V      G    L  AP+
Sbjct: 173 KTFKIRSKIVSEIRHFFEERDFLEVETPMMHPIAGGANAKPFVTHHNALGVDRYLRIAPE 232

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Y + L+  GF+  F+I   FR+E       P EF  ++   ++    D+++  E + 
Sbjct: 233 LYLKRLVVGGFEAVFEINRNFRNEGMDQTHNP-EFTMIEFYWAYHNYHDLMHLSEEMF 289


>gi|254497935|ref|ZP_05110699.1| asparaginyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254352829|gb|EET11600.1| asparaginyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 467

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 111/275 (40%), Gaps = 44/275 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACF--EIAKSVRS 67
           G  +V   V + GWV   R    G+ F+ + D   +   Q+VA    A +  EI K    
Sbjct: 13  GAINVDEHVTVRGWVKTRRDSKAGLSFISVHDGSCFAPIQIVATDGLANYHDEITKLNAG 72

Query: 68  EWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIR 125
             ++    LV S+           GQ  E+ A++I+++   E     P+  +R    S+ 
Sbjct: 73  CSLIASGKLVASQGK---------GQSFEIQAEQIQVVGWVENPDTYPIQAKRH---SLE 120

Query: 126 FKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           F      LR  T   + V R R  +  ++      + +    TPI+TAS  EGA +    
Sbjct: 121 FLRDVAHLRPRTNTFSAVTRVRHCLSQAIHRFFHEQGYFWIHTPIITASDCEGAGEMF-- 178

Query: 184 SRVNQGSFYALPQAPQQY----------KQLLMASG----------FDRYFQIAPCFRDE 223
            RV+      +P+ PQ            +  L  SG            + +   P FR E
Sbjct: 179 -RVSTLDLLNIPKNPQGQIDFSKDFFGKETFLTVSGQLNLEAYCMAMSKVYTFGPTFRAE 237

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +  + R   EF+ ++ E++F    DI +  +N+LR
Sbjct: 238 NSNTSRHLAEFWMIEPEVAFATLSDICDLSQNMLR 272


>gi|213405907|ref|XP_002173725.1| cytoplasmic asparagine-tRNA ligase Nrs1 [Schizosaccharomyces
           japonicus yFS275]
 gi|212001772|gb|EEB07432.1| cytoplasmic asparagine-tRNA ligase Nrs1 [Schizosaccharomyces
           japonicus yFS275]
          Length = 570

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 115/288 (39%), Gaps = 37/288 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----------SACFEIAKSVRSEWV 70
           V++ GWVHR+R   GIIF+ +RD  G  Q V   D          +A  E A  +R    
Sbjct: 146 VKVYGWVHRLRNQKGIIFIVLRDGTGYLQAVLTGDVYEKANYEFLTAGPESAIELRGTLK 205

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
              +G    +SA   +  ++     + A  I   +   +L        E   S+    R 
Sbjct: 206 PVPEG----KSAPGGHELVVDYYTIVHAAPIGEEAFTNQL------NAEADPSVLLDQRH 255

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L +R +T    +  R R + ++R    A +  E + P +  +  EG           Q +
Sbjct: 256 LVIRGETASAVLKVRARALRAVRDTYEALHLTEVTPPCMVQTQVEGGSTLFKLDYYGQPA 315

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +  + +  D  F I   FR E   + R   E+  ++ E+ F++ +  L
Sbjct: 316 Y--LTQSSQLYLEASLPALGD-VFCIQESFRAEKSLTRRHLSEYTHVEAELVFLDFETYL 372

Query: 251 NTMEN-------------VLRGVFEEFSNGNTVSNN-FLRICYDDAIR 284
             +E              V   + ++ + G  +    F+R+ Y DAI+
Sbjct: 373 QHLEEFICQTVERLLADPVAAPLIKQLNPGFKMPERPFMRLKYADAIK 420


>gi|188534251|ref|YP_001908048.1| asparaginyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|188029293|emb|CAO97170.1| Asparaginyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 466

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 112/283 (39%), Gaps = 52/283 (18%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G   V S V + GWV R R          RD       +A  D +CF   ++V +  +  
Sbjct: 12  GRVTVDSEVTVRGWV-RTR----------RDSKAGISFIAVYDGSCFNPVQAVVNNSLNN 60

Query: 73  IDGLVMSRSAETINANIITGQI----------ELSAQKIEILS-VAEELPLPVFGEREYP 121
               V+  +  T  + +ITG++          E+ A  +E++  V +    P+  +R   
Sbjct: 61  YQDEVLRLT--TGCSVVITGKVVESPGEGQSFEIQATHVEVIGWVDDPDTYPMAAKRH-- 116

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARD 179
            SI +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +
Sbjct: 117 -SIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGE 175

Query: 180 FLVPSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPC 219
                RV+      LP+ P+                    Q      AS   + +   P 
Sbjct: 176 MF---RVSTLDMENLPRTPEGKVNYDEDFFGKEAFLTVSGQLNGETYASAISKIYTFGPT 232

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           FR E+  + R   EF+ L+ E++F + +D     E +L+ VF+
Sbjct: 233 FRAENSHTSRHLAEFWMLEPEIAFADLEDNAALAEAMLKYVFK 275



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    EV+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLEVLDARLAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIAFPRT 460


>gi|295669995|ref|XP_002795545.1| asparaginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226284630|gb|EEH40196.1| asparaginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 580

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 101/242 (41%), Gaps = 9/242 (3%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VH +R    +IF+ + D YG+ Q +   D        ++  E  + I G +
Sbjct: 155 GTRVRVVGRVHHLRSQKDMIFVTLSDGYGLLQCIFTGDLVKTYDMMTLTLETSIAIHGEM 214

Query: 78  MSRSAETINANIITGQIELSAQKIEIL--SVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            +   +    N      EL A    I+  +  ++  +     R+      +  R L LR 
Sbjct: 215 RAVPPK----NHAYDDRELHADFFTIIGRAAGDKEAITTRVARDSDPHTLYDNRHLVLRG 270

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +T    +  R   + + R     +  +E + P +  +  EG           + +F  L 
Sbjct: 271 ETSSSVMKVRAATLRAFRKAFEEKGMLEVTPPAMVQTQVEGGSTLFEFDYYGEKAF--LT 328

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+ Q Y +  + S  D  F + P FR E   + R   E+  ++ E+ F+   D+L+ +E+
Sbjct: 329 QSSQLYLETCLPSLGD-VFCVCPSFRAEKSLTRRHLSEYTHVEAELDFISFTDLLDYLED 387

Query: 256 VL 257
           ++
Sbjct: 388 MI 389


>gi|72163280|ref|YP_290937.1| lysyl-tRNA synthetase [Thermobifida fusca YX]
 gi|71917012|gb|AAZ56914.1| lysyl-tRNA synthetase, class-2 [Thermobifida fusca YX]
          Length = 496

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 112/258 (43%), Gaps = 17/258 (6%)

Query: 10  GDLGVSDV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           GDL   DV  G  V L+G V   R  G + F  IRD  G  QV+ + D    E   + +S
Sbjct: 48  GDLA-PDVYTGERVALTGRVMLYRTGGKLCFATIRDASGDIQVMLSLDRVGAERLAAWKS 106

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           +  L   G  +    E I +    G++ + A    + S     PLP   +       R +
Sbjct: 107 DVDL---GDHIGVEGEVITSR--RGELSILADTWTLTSKCLR-PLPDKHKGLTDPEARVR 160

Query: 128 YRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSR 185
            R++DL  +   + +V +R R + ++R  +    +IE  TP+L        AR F+    
Sbjct: 161 QRYVDLIVNPESREMVMRRARTVRALRDGLHNRGYIEVETPMLQQVHGGATARPFVTHIN 220

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ Y + ++  G ++ F+I   FR+E   S   P EF  L+   ++ +
Sbjct: 221 AYDLDLY-LRIAPELYLKRMVVGGVEKVFEINRNFRNEGADSTHNP-EFTMLEFYQAYAD 278

Query: 246 QDDILNTMENVLRGVFEE 263
                N M ++ R + +E
Sbjct: 279 ----YNVMADITRELIQE 292



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 13/92 (14%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           ++DL+  G E+ +G          R  ++E  L A      + ++ E+      RA +  
Sbjct: 404 KWDLIGFGMELGTGYSELIDPVEQRRRLTEQSLLAAGGDPEAMQLDED----FLRALEYA 459

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           MPP GG+  G+DR++M   G KN+RE  LFP+
Sbjct: 460 MPPTGGVGVGVDRLLMAFTG-KNIRETILFPL 490


>gi|255523993|ref|ZP_05390955.1| asparaginyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296186852|ref|ZP_06855253.1| asparaginyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255512280|gb|EET88558.1| asparaginyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048566|gb|EFG87999.1| asparaginyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 463

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/345 (21%), Positives = 130/345 (37%), Gaps = 55/345 (15%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V++SGWV  VR      F++I D   +   QVV +     F+    +     L ++G ++
Sbjct: 21  VKISGWVRTVRDSKSFGFIEINDGSFFKNIQVVFDDSLENFKDVTKLAISSSLSVEGTIV 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                           E+ A KI +   +     P+  +R   E +R       LR  + 
Sbjct: 81  LTPGSK-------QPFEMKATKITVEGKSSS-DYPLQKKRHSLEYLR---TIAHLRPRSN 129

Query: 139 HKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGARDFL---------VPSRVN 187
             + V R R + +         + F+  +TP++T S  EGA +           VP   N
Sbjct: 130 TFSAVFRVRSVAAFAVHKFFQEKGFVYANTPLITGSDCEGAGEMFRLTTLDLENVPKDEN 189

Query: 188 QGSFYALP--------QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               Y+              Q      A  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 190 GKVDYSKDFFGKETNLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHAAEFWMIEP 249

Query: 240 EMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLRIC 278
           EM+F E  D ++  E++++ + +          EF N            N  +++F RI 
Sbjct: 250 EMAFAELKDYMDIAEDLVKYIIKYVLANAPEEMEFFNSFIDKGLFDRLDNVANSDFGRIS 309

Query: 279 YDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVN 321
           Y +A+        + + P+   +   TEH  +   +VF K + V 
Sbjct: 310 YTEAVDILKKSGHEFQYPVEWGIDLQTEHERYLTEKVFKKPIFVT 354



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G  R    +++ +    +G+SKE     +       + G   H G   
Sbjct: 378 DLLVPGVGEIVGGSQREERLDILEKRIDEMGLSKE----DYWWYLELRKYGETKHSGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +RI+M + G  N+R+V  FP +
Sbjct: 434 GFERILMYITGMSNIRDVIPFPRT 457


>gi|77918200|ref|YP_356015.1| asparaginyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|77544283|gb|ABA87845.1| asparaginyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 468

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 98/252 (38%), Gaps = 27/252 (10%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           GWV  VR    + F+ + D   +   QVV  P+   F            C  G  M    
Sbjct: 31  GWVRSVRRGKEVTFIALNDGSCMANLQVVLTPEVDGFATVSR-------CGTGAAMQVEG 83

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
           E I +     + EL A++++IL   +    P+  +R   E +R     L  R +T     
Sbjct: 84  ELIASPAAGQEWELHARQVKILGDTDS-DYPLQKKRHSFEFLR-SIAHLRPRANTFGAVF 141

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------------RDFLVPSRVN-QG 189
             R+ +  ++        F+   TPI+TA+  EGA            R  L   +++ + 
Sbjct: 142 RMRSALSFAIHRFFRERGFLYVHTPIITANDCEGAGEMFRVSTLPADRPPLTEGKIDWRQ 201

Query: 190 SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+          QL   L A+ F   +   P FR E+  + R   EF+ ++ E++F + 
Sbjct: 202 DFFGEKTGLTVSGQLQGELFATAFSDIYTFGPTFRAENSHTSRHAAEFWMIEPEIAFADL 261

Query: 247 DDILNTMENVLR 258
            D     E  LR
Sbjct: 262 ADDCALAEEFLR 273



 Score = 37.7 bits (86), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    +V++   ++VGI  + ++          + G  PH G   G +R++M 
Sbjct: 391 EIIGGSQREERLDVLMGKMNSVGIEAQHLD----WYLDTRRWGSCPHAGFGLGFERLLMY 446

Query: 550 LLGAKNVREVSLFPMS 565
           + G +N+R+V  FP +
Sbjct: 447 VTGMENIRDVIPFPRT 462


>gi|315453704|ref|YP_004073974.1| lysyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132756|emb|CBY83384.1| lysyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 496

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 16/255 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G  D  S   L G V  +R  G   FL I D   + QV  + +    ++ K     +  C
Sbjct: 48  GQKDPASSHALVGRVRFIRLMGKACFLKIEDQSALVQVYLSQN----DLGKEAFDSFKKC 103

Query: 73  ID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
           ++ G +++   E       T ++ L A   +IL+ A  +PLP          +R++ R++
Sbjct: 104 VEVGDIVN--VEGYPFVTKTNELSLHATSYKILTKAI-VPLPEKFHGLSDIELRYRQRYV 160

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +   K + K R++I+  +R     + F+E  TP++   +    AR F+      + 
Sbjct: 161 DLIANPEVKEVFKTRSQIVAIIRRFFEQKGFLEVETPMMHPIAGGANARPFITYHNALEV 220

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  L+   ++   +D+
Sbjct: 221 ERY-LRIAPELYLKRLVVGGFEAVFEINRNFRNEGMDHSHNP-EFTMLEFYWAYKTYEDL 278

Query: 250 LNTMENVLRGVFEEF 264
           +     + + +FEE 
Sbjct: 279 I----ALTKELFEEL 289



 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL  +K +++V LFP
Sbjct: 450 ALGHGMPPTAGEGIGIDRLVMLLTNSKTIKDVILFP 485


>gi|302338751|ref|YP_003803957.1| asparaginyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301635936|gb|ADK81363.1| asparaginyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 462

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 122/337 (36%), Gaps = 56/337 (16%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH    +     G  V + GWV   R    + FL++ D      +    D A       
Sbjct: 3   RTHRIVTILSMAPGERVTVYGWVRTKRDSKNVCFLELSDGSSFRNLQVIVDKA------- 55

Query: 65  VRSEWVLCIDGLVMSRSAE---TINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREY 120
              E    ID +    S E   T+ A+    Q IEL A  ++++  A     P+  +R  
Sbjct: 56  -EEEKSPVIDSITTGASVEVTGTLAASPGKNQSIELQADSLKLIGEAPAESYPLQKKRHS 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +   L  R +T       R ++  ++      + FI   TP+++ S  EGA + 
Sbjct: 115 FEFLR-EIAHLRPRTNTFGAVTRVRNQLSWAVHRFFQEQGFIYVHTPLISTSDCEGAGEM 173

Query: 181 L---------VPSRVNQGSFY-------ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
                     VP +  +  +        A      Q +  + AS F   +   P FR E+
Sbjct: 174 FQVTTLPLEKVPLKEGKIDYSQDFFGKRASLTVSGQLEAEIYASAFSDVYTFGPTFRAEN 233

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTME-------NVLRGVFEEFSNG---------- 267
             + R   EF+ ++ EM+F    D+   ME       N+L  V E  S            
Sbjct: 234 SNTTRHLAEFWMIEPEMAFC---DLAGNMELAEAFLKNILSSVLEHCSEDMKFFNQWVEK 290

Query: 268 -------NTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
                    +   F  + Y +A++   T K +   P+
Sbjct: 291 GIIDSLEKVIDTPFTHMSYTEAVQALKTGKTNFEFPV 327


>gi|159041752|ref|YP_001541004.1| lysyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157920587|gb|ABW02014.1| lysyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 493

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 23/247 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEIAKSVRSEWVLCIDGLV 77
           +R  G V  VR HG   F+DI D     Q+   V        E  + V    V+ ++G +
Sbjct: 56  IRTVGRVANVRRHGKASFVDIFDEGERLQLYLRVNELGDRFEEFHRYVDRGDVIGVEGDL 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                       + G++ L      +L+ A   P P + +  Y    R+ +R+LD   ++
Sbjct: 116 FY---------TLKGELTLLVHDYALLAKALLEP-PDWSK--YTTEWRYTHRYLDFLYNS 163

Query: 138 LHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF---YA 193
             + I++ R RII ++R  + +  F+E  TPIL    P        P + +  +    + 
Sbjct: 164 EARRIIQTRFRIIQAIREFLNSMGFMEVETPIL---QPVYGGALAKPFKTHVNALDEDWY 220

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  + + Y +  +  GF++ ++I   FR+ED      P EF  L++  ++ + +DI+   
Sbjct: 221 LRISLELYLKRFIIGGFNKVYEIGKVFRNEDIDVYHNP-EFTMLELYWAYADYNDIMRLT 279

Query: 254 ENVLRGV 260
           E+++  V
Sbjct: 280 EDLIHQV 286



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 28/40 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A   GMPP GG+  GIDR+VM+L G  +++EV  FPM ++
Sbjct: 452 ALSYGMPPTGGLGIGIDRLVMVLTGQYSIKEVIPFPMVKH 491


>gi|319900038|ref|YP_004159766.1| asparaginyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319415069|gb|ADV42180.1| asparaginyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 467

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 111/273 (40%), Gaps = 39/273 (14%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L   D G+ V + GWV   R    + F+ + D   I   Q+V + DS    + 
Sbjct: 6   RTKIIDLLKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLDSFEENML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREY 120
           K + +   L ++G+        +  ++ +GQ  E+ A+ IE+L   +   PL   G    
Sbjct: 66  KDITTGACLSVNGV--------LTESVGSGQKAEVHARAIEVLGACDNAYPLQKKGH--- 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGA- 177
             S+ F      LR  T     V R R   +M          F    TPI+TAS  EGA 
Sbjct: 115 --SMEFLREIAHLRPRTNTFGAVFRIRHNMAMAIHHFFHERGFFYFHTPIITASDCEGAG 172

Query: 178 RDFLVPSR-------------VNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221
           + F V ++             +    F+    +     QL   L A+     +   P FR
Sbjct: 173 QMFQVTTKNLYDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            E+  + R   EF+ ++ E++F   +DI++ M+
Sbjct: 233 AENSNTPRHLAEFWMIEPEVAF---NDIVDNMD 262


>gi|145636232|ref|ZP_01791902.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145270754|gb|EDK10687.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 467

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 38/275 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE 
Sbjct: 13  GKVAIGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYE------SEI 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           +    G  +  + + + +      +EL A+K+E+    E+    P+  +R    SI +  
Sbjct: 67  LRLTTGCSVIVTGKVVESPSEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLR 123

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV
Sbjct: 124 EVAHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RV 180

Query: 187 NQGSFYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPR 226
           +      LP+         Q +   +  L  SG            + +   P FR E+  
Sbjct: 181 STLDLENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 240

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ ++ E++F    D     E++L+ VF
Sbjct: 241 TTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVF 275


>gi|190575044|ref|YP_001972889.1| asparaginyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|190012966|emb|CAQ46598.1| putative 2 asparaginyl-tRNA synthetase [Stenotrophomonas
           maltophilia K279a]
          Length = 464

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 106/275 (38%), Gaps = 40/275 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  VR    + F+++ D   +   QVVA    A F+  K + S   +   G
Sbjct: 17  GGEVTVRGWVRTVRGSANLAFVNVSDGSCFAPIQVVAGDSLANFDEIKRLTSGCSVIATG 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL 133
            ++    +        GQ  E+ A  +E++   E+ L  P+   +  P S  F      L
Sbjct: 77  TLVKSQGK--------GQSFEIQASAVEVVGWVEDPLTYPI---QPKPMSPEFLREVAHL 125

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R R  L   + +    +     R   EN F   STPI+T S  EGA       RV+    
Sbjct: 126 RPRTNLFGAVTRIRNCLAQAVHRFFHENGFNWISTPIITTSDAEGAGQMF---RVSTLDM 182

Query: 192 YALPQAPQQY----------KQLLMASG----------FDRYFQIAPCFRDEDPRSDRLP 231
             LP+  +            +  L  SG            + +   P FR E+  + R  
Sbjct: 183 VNLPRDEKGAIDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHL 242

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
            EF+ ++ E++F +  +     E  L+ +F    N
Sbjct: 243 AEFWMIEPEIAFADLAEDARLAEEFLKYLFRAVLN 277


>gi|145630812|ref|ZP_01786590.1| asparaginyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983694|gb|EDJ91154.1| asparaginyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 467

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 38/275 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE 
Sbjct: 13  GKVAIGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYE------SEI 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           +    G  +  + + + +      +EL A+K+E+    E+    P+  +R    SI +  
Sbjct: 67  LRLTTGCSVIVTGKVVESPSEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLR 123

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV
Sbjct: 124 EVAHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RV 180

Query: 187 NQGSFYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPR 226
           +      LP+         Q +   +  L  SG            + +   P FR E+  
Sbjct: 181 STLDLENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 240

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ ++ E++F    D     E++L+ VF
Sbjct: 241 TTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVF 275


>gi|11387152|sp|Q9RHV9|SYK_BACST RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|6681368|dbj|BAA88691.1| lysyl-tRNA synthetase [Geobacillus stearothermophilus]
          Length = 494

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 129/311 (41%), Gaps = 39/311 (12%)

Query: 5   RTHSC-------GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH         GDL   ++      V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 34  RTHKAEELFELYGDLSKEELEEQQIEVAVAGRIMTKRGMGKAGFAHIQDVTGQIQIYVRQ 93

Query: 55  DSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EEL 110
           D      +E+ K      ++ + G +              G++ +     E L+ A   L
Sbjct: 94  DDVGEQQYELFKISDLGDIVGVRGTMFKTKV---------GELSIKVSSYEFLTKALRPL 144

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           P    G ++  +  R++ R+LDL  +    K  + R+ II SMR  + +  ++E  TP++
Sbjct: 145 PEKYHGLKDIEQ--RYRQRYLDLIMNPESKKTFITRSLIIQSMRRYLDSHGYLEVETPMM 202

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            A +    AR F+        + Y +  A + + + L+  G ++ ++I   FR+E   + 
Sbjct: 203 HAVAGGAAARPFITHHNALDMTLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTR 261

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICY 279
             P EF  L++  ++ +  DI+   EN++  +  E      +         +  + R+  
Sbjct: 262 HNP-EFTMLELYEAYADFRDIMKLTENLIAHIATEVLGTTKIQYGEHLVDLTPEWRRLHM 320

Query: 280 DDAIRRY-GTD 289
            DAI+ Y G D
Sbjct: 321 VDAIKEYVGVD 331



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 454 ALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFP 489


>gi|33152476|ref|NP_873829.1| asparaginyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|59798581|sp|Q7VLL7|SYN_HAEDU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|33148699|gb|AAP96218.1| asparaginyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 467

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 107/269 (39%), Gaps = 32/269 (11%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           VG  V + GWV   R    G+ FL + D   +   QV+ N D A ++      +E +   
Sbjct: 17  VGEKVTVRGWVRTRRDSKAGLSFLTVYDGSCFEPIQVIINNDLANYQ------TEILRLT 70

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132
            G  +  +   + +      +EL A ++E++  V +    P+  +R    SI +      
Sbjct: 71  AGCSVIVTGNIVESPASGQAVELQALEVEVVGWVDDPDTYPMAAKRH---SIEYLREVAH 127

Query: 133 LRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T     V R R  +  ++      + F   +TP++TAS  EGA +    S ++  +
Sbjct: 128 LRPRTNLIGAVARVRHCLAQAIHRFFNGQGFYWVATPLITASDTEGAGEMFRVSTLDLEN 187

Query: 191 FYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGE 233
                     Y Q        L  SG            + +   P FR E+  + R   E
Sbjct: 188 LPRTEHGKIDYSQDFFGKEAFLTVSGQLNGESYACALSKVYTFGPTFRAENSNTTRHLAE 247

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           F+ ++ E +F    D     E++L+ VF+
Sbjct: 248 FWMVEPEFAFATLADNAKLAEDMLKYVFK 276


>gi|325103136|ref|YP_004272790.1| asparaginyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324971984|gb|ADY50968.1| asparaginyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 482

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 76/337 (22%), Positives = 131/337 (38%), Gaps = 66/337 (19%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69
           L  ++ G  V + GWV   R +    F+ + D   ++  QVV + ++   +I K + +  
Sbjct: 11  LKSTEFGKEVIVMGWVKTFRNNQ---FIALNDGSTLSNLQVVVDFENTSGDILKKITTGA 67

Query: 70  VLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            +   G        T+  ++  GQ +E+ A  +EIL  ++    P+  ++   E +R K 
Sbjct: 68  AVKAIG--------TLVESVGKGQTVEVKANTVEILGESDAEKYPLQPKKHSLEFLREKA 119

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV------ 182
             L  R  T +     R  +  ++        F    TPI+TAS  EGA +         
Sbjct: 120 H-LRFRTTTFNAVFKVRHALAFAIHKFFNERGFTYLHTPIITASDAEGAGEMFRVTTLEL 178

Query: 183 --PSRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLP 231
             P R  QG+      F+          QL   L A      +   P FR E+  + R  
Sbjct: 179 GNPPRDEQGNINFKEDFFGRSTNLTVSGQLEGELGAMALGEIYTFGPTFRAENSNTTRHL 238

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVF--------EEFSNGNT-------------- 269
            EF+ ++ E++F + +D ++  E++L+ V         EE    NT              
Sbjct: 239 AEFWMIEPEVAFADLEDNMDLAEDMLKYVIKYALDNCAEEIEFLNTRLLDEEKNKAQKDR 298

Query: 270 ------------VSNNFLRICYDDAIRRYGTDKPDLR 294
                       + N+F RI Y +AI      KP+ +
Sbjct: 299 SELSLIEKLNFCLDNDFERITYTEAIEILKRSKPNQK 335


>gi|301609856|ref|XP_002934488.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic [Xenopus
           (Silurana) tropicalis]
          Length = 555

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 103/252 (40%), Gaps = 33/252 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---VLCID 74
           G  V++ GWVHR+R     +                   + FEI ++++  +     C +
Sbjct: 135 GQRVKVFGWVHRLRRQVPALL------------------SFFEIVRNIQVVFDGTCQCYN 176

Query: 75  GLVMSRSAE-----TIN----ANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           GLV+S  +      T+N         G  EL+    EI+ +A           E    ++
Sbjct: 177 GLVLSTESTVAVYGTLNLVPDGKQAPGGHELACDYWEIVGLAPAGGADNLLNEESDVDVQ 236

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R + +R + + K    R+ +I+  R       + E + P L  +  EG         
Sbjct: 237 LNNRHMMIRGENMSKIFKVRSTVIHCFRNHFFDRGYYEITPPTLVQTQVEGGSTLFKLDY 296

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             + ++  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+ 
Sbjct: 297 FGEEAY--LTQSSQLYLETCIPAMGDT-FCIAQSYRAEQSRTRRHLAEYTHIEAECPFMT 353

Query: 246 QDDILNTMENVL 257
            +D+LN +E+++
Sbjct: 354 FEDLLNRLEDLV 365



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 472 LMPNVGEIVGGSMRIWDSEELLEGYKREGIDA----TPYYWYTDQRKYGTCPHGGYGLGL 527

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  +L   ++R+V L+P     C
Sbjct: 528 ERFLTWILNRHHIRDVCLYPRFVQRC 553


>gi|227513894|ref|ZP_03943943.1| possible lysine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087742|gb|EEI23054.1| possible lysine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 248

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + GMPP GG+  GIDR+VML+  AK++R+V LFP
Sbjct: 206 EALEYGMPPTGGLGVGIDRMVMLMTDAKSIRDVLLFP 242


>gi|313888504|ref|ZP_07822171.1| asparagine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845533|gb|EFR32927.1| asparagine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 462

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/303 (22%), Positives = 113/303 (37%), Gaps = 49/303 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + LSGWV   R      F+++ D   +   QVV   +   F+  +       L I G ++
Sbjct: 20  IVLSGWVKTSRASKNFGFIELTDGTVFKPIQVVYGKELENFDEVEKFPISSSLEISGKIV 79

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               +           EL A KIE +  + +   P+  +R   E +R     L  R +T 
Sbjct: 80  KSPGKN-------QSFELQANKIEAI-CSSDPSYPLQKKRHTMEYLR-TIAHLRPRANTF 130

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV-------------PSR 185
           +     R+ I  ++      + F+    PI+T S  EGA +                P+ 
Sbjct: 131 NAVFRVRSLIAYAIHKFFQEKGFVYVHAPIITTSDAEGAGEMFQVTTLDIDKIAKSEPTE 190

Query: 186 VNQGSFYALPQA----PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           V+    +   +       Q +    A  F   +   P FR E+  + R   EF+ ++ EM
Sbjct: 191 VDYSKDFFNKKTHLTVSGQLEAEAFAEAFRDIYTFGPTFRAENSNTQRHAAEFWMIEPEM 250

Query: 242 SFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLRICYD 280
           +F + +  ++  E +L+ +            EF N            N V N F RI Y 
Sbjct: 251 AFADLNVNMDVSEEMLKYIISYVLENAPQEMEFFNNFIDKGLLERLHNVVENEFARITYT 310

Query: 281 DAI 283
           +AI
Sbjct: 311 EAI 313



 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G  R H  +V+ +   N+G+  +   N +  L R    G   H G   
Sbjct: 377 DLLVPGVGEIIGGSQREHRFDVLEEKMKNIGMDMDNY-NWYLDLRR---YGSVVHSGFGL 432

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +R VM + G KN+R+V  FP +
Sbjct: 433 GFERAVMYITGMKNIRDVIPFPRT 456


>gi|307153161|ref|YP_003888545.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306983389|gb|ADN15270.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 573

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/310 (21%), Positives = 131/310 (42%), Gaps = 41/310 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYG----------ITQVVANPDSACFEIAKSVRSEWV 70
           V ++G +   R  G + F +++D  G          I Q +A+  +A   + K   +  +
Sbjct: 68  VAVAGRIIARRVFGKLAFFNLQDESGTIQLYLDKKRIGQTMADVPNAFNTVMKLTDTGDI 127

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L   G +              G++ +   +  IL+ +  LPLP           R++ R+
Sbjct: 128 LGAKGTIKRTEK---------GELSIYVNEYAILTKSL-LPLPDKFHGLTDIEKRYRQRY 177

Query: 131 LDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQ 188
           +DL  +  + +   +R +I  S+R  +  E F+E  TP+L + +    AR F+      +
Sbjct: 178 VDLIINPEVRETFRRRAQITASIRRYLEGEGFLEIETPVLQSEAGGADARPFITYHNTLE 237

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  A + + + L+  GF++ F++   FR+E   +   P EF  +++  ++ +  D
Sbjct: 238 MDLY-LRIATELHLKRLIVGGFEKVFEMGRIFRNEGVSTRHNP-EFTSIEIYQAYADYHD 295

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEH 305
           ++   EN++       +N    +   L++ Y D        + DL  P   + MH + E 
Sbjct: 296 MMVLTENII-------TNAAKDALGTLKVTYQD-------QEIDLTPPWRRLTMHQLVEE 341

Query: 306 FVHSEFRVFS 315
               +F  F 
Sbjct: 342 KTGIDFNQFQ 351



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 31/47 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+ ++    L G
Sbjct: 470 ALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLKSQSAALKG 516


>gi|298207686|ref|YP_003715865.1| lysyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83850323|gb|EAP88191.1| lysyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 563

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 113/252 (44%), Gaps = 17/252 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV-RSEWVLCID-G 75
           G  V ++G + +    G   F  ++D  G  QV  N D  C    K++  + +   +D G
Sbjct: 46  GKKVVIAGRLLQKNIQGKASFGQLQDSAGRIQVYFNRDEICEGEDKTLYNTVFKKLLDLG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP-------VFGEREYPESIRFK 127
             +    E     +  G+  +  +   ILS +   LPLP       V+ E   PE +R++
Sbjct: 106 DFIGIEGELFTTQV--GEKTVMVKNFSILSKSLRPLPLPKKDKDGNVYDEFNDPE-LRYR 162

Query: 128 YRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R++DL  +   K + VKRT++ N+MR       + E  TPIL        A+ F+    
Sbjct: 163 QRYVDLVVNPKVKEVFVKRTKLFNAMRNFFNDAGYFEVETPILQPIPGGAAAKPFISHHN 222

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ +
Sbjct: 223 ALDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKD 280

Query: 246 QDDILNTMENVL 257
            + ++   EN+L
Sbjct: 281 YNWMMEFTENLL 292



 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 8/56 (14%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           RA + GMPP  G+  G+DR++M L   ++++EV  FP         M    T+SVE
Sbjct: 455 RALEYGMPPTSGLGIGMDRLIMFLTNNQSIQEVLFFPQ--------MKPEKTISVE 502


>gi|319897125|ref|YP_004135320.1| asparaginyl tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432629|emb|CBY80990.1| asparaginyl tRNA synthetase [Haemophilus influenzae F3031]
          Length = 467

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 125/318 (39%), Gaps = 59/318 (18%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE 
Sbjct: 13  GKVAIGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYE------SEI 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           +    G  +  + + + +      +EL A+K+E+    E+    P+  +R    SI +  
Sbjct: 67  LRLTTGCSVIVTGKVVESPSEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLR 123

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV
Sbjct: 124 EVAHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RV 180

Query: 187 NQGSFYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPR 226
           +      LP+         Q +   +  L  SG            + +   P FR E+  
Sbjct: 181 STLDLENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 240

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG--------- 267
           + R   EF+ ++ E++F    D     E++L+ VF           +F            
Sbjct: 241 TTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITR 300

Query: 268 --NTVSNNFLRICYDDAI 283
             N V+++F++I Y DAI
Sbjct: 301 LENFVNSDFVQIDYTDAI 318


>gi|91218337|ref|ZP_01255281.1| lysyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91183475|gb|EAS69874.1| lysyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 563

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 19/253 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-G 75
           G  V ++G +   R  G   F +++D  G  QV  N D  C    K++ +E +   +D G
Sbjct: 46  GKKVVVAGRLMSRRIQGKASFAELQDGEGRVQVYFNRDEICTGEDKTLYNEVYKKLLDIG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE-------SIRFK 127
             +    E      + G+  +     ++LS + + LPLP   +RE  E         R++
Sbjct: 106 DFIGIEGELFTT--MVGEKTIKVLDFKLLSKSLKPLPLPK-KDREGHEYDGFQDAEQRYR 162

Query: 128 YRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPS 184
            R++DL  +   K+I K R+ +  +MR     + ++E  TPIL  S P GA  R F+   
Sbjct: 163 QRYVDLVVNPGVKDIFKKRSALFTAMRNFFNEKGYMEVETPIL-QSIPGGAAARPFITHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +S+ 
Sbjct: 222 NALDIPLY-LRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVSYK 279

Query: 245 EQDDILNTMENVL 257
           + + ++   EN+L
Sbjct: 280 DYNWMMEFTENLL 292



 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L    +++EV  FP
Sbjct: 456 RALEYGMPPTSGLGIGMDRLIMFLTNNPSIQEVLFFP 492


>gi|73540772|ref|YP_295292.1| lysyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|123760232|sp|Q473I5|SYK_RALEJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|72118185|gb|AAZ60448.1| Lysyl-tRNA synthetase, class-2 [Ralstonia eutropha JMP134]
          Length = 516

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 110/242 (45%), Gaps = 15/242 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q     D    ++  + +  W L   G ++S 
Sbjct: 76  VAIAGRMMLKRVMGKASFATVQDGSGQIQFYITRDKVGEDVYAAFK-HWDL---GDIISA 131

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N   G++ +  Q++ +LS +   PLP        + ++++ R++DL      +
Sbjct: 132 RGVLFRTN--KGELSVQVQELRLLSKSLR-PLPDKFHGLADQEMKYRQRYVDLIVSPETR 188

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  + RT+ ++S+R  M    F+E  TP+L        A+ F+          + +  AP
Sbjct: 189 NTFRARTKAMSSLRRHMSDAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMF-MRIAP 247

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Y + L+  GF+R F+I   FR+E   PR +    EF  ++   ++ +   +++  EN+
Sbjct: 248 ELYLKRLIVGGFERVFEINRNFRNEGVSPRHN---PEFTMMEFYAAYTDYRWLMDFTENL 304

Query: 257 LR 258
           +R
Sbjct: 305 IR 306



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    + +E     F      K+  +     +   Y RA + GMPP 
Sbjct: 424 RFELFITGREIANGFSELNDAEDQADRFRKQVEQKDAGDEEAMYYDADYIRALEYGMPPT 483

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + N+R+V LFP
Sbjct: 484 GGCGIGIDRLVMLLTDSPNIRDVILFP 510


>gi|312137569|ref|YP_004004905.1| lysyl-tRNA ligase lyss [Rhodococcus equi 103S]
 gi|311886908|emb|CBH46216.1| lysyl-tRNA ligase LysS [Rhodococcus equi 103S]
          Length = 1100

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 12/221 (5%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      S  G+ VR++G + R+R +GG+ F  +RD  G  QV+    +    +    
Sbjct: 646 THTVAAATSSPEGTRVRIAGRLLRIRTYGGVAFAVLRDWSGDIQVLIERTTVGDRL---- 701

Query: 66  RSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
             E+    D G +M  S     +    G++ L A +  +       PLP   +       
Sbjct: 702 -DEFSTDFDLGDLMEVSGTIGRSR--KGELSLLATEWRMNGKCLH-PLPDKWKGLTDAET 757

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLV 182
           R + R++DL  +   + ++  RT I+ S+R  +   +++E  TPIL        A  F+ 
Sbjct: 758 RVRQRYVDLAINPESRRLLAARTAIVKSLRDTLAGRDYLEVETPILQRIHGGANAAPFVT 817

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
                    Y L  AP+ + + L  +G ++ F+I   FR+E
Sbjct: 818 HINAYDLDLY-LRIAPELFLKRLCVAGMEKVFEIGRVFRNE 857



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           R  ++E  L A      + E+ E+      +A +
Sbjct: 1007 AAKWDLVAWGVELGTAYSELTDPIDQRRRLTEQSLLAAGGDAEAMELDED----FLQALE 1062

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  G+DRIVML+ G  ++RE   FP ++
Sbjct: 1063 HAMPPTGGLGMGVDRIVMLITGG-SIRESLAFPFAK 1097


>gi|229847451|ref|ZP_04467548.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229809592|gb|EEP45319.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|309973185|gb|ADO96386.1| Asparaginyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 467

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 38/275 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE 
Sbjct: 13  GKVAIGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYE------SEI 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           +    G  +  + + + +      +EL A+K+E+    E+    P+  +R    SI +  
Sbjct: 67  LRLTTGCSVIVTGKVVESPSEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLR 123

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV
Sbjct: 124 EVAHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RV 180

Query: 187 NQGSFYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPR 226
           +      LP+         Q +   +  L  SG            + +   P FR E+  
Sbjct: 181 STLDLENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 240

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ ++ E++F    D     E++L+ VF
Sbjct: 241 TTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVF 275


>gi|296103067|ref|YP_003613213.1| asparaginyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295057526|gb|ADF62264.1| asparaginyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 441

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 35/251 (13%)

Query: 42  RDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS---A 98
           RD       +A  D +CF+  ++V +  +   +  V+  +  T  + I+TG +  S    
Sbjct: 5   RDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNDDVLHLT--TGCSVIVTGVVVASPGQG 62

Query: 99  QKIEILSVAEELPLPVFGEREYP-----ESIRFKYRFLDLRRDTLHKNIVKRTR--IINS 151
           Q  EI + A E+   V     YP      SI +      LR  T     V R R  +  +
Sbjct: 63  QSFEIQATAVEVTGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQA 122

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ------------ 199
           +      + +   STP++TAS  EGA +     RV+      LP+ P+            
Sbjct: 123 LHRFFDEQGYFWVSTPLITASDTEGAGEMF---RVSTLDLENLPRTPEGKVDFDKDFFGK 179

Query: 200 --------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
                   Q      A    + +   P FR E+  + R   EF+ L+ E++F + +D+  
Sbjct: 180 EAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFADLNDVAG 239

Query: 252 TMENVLRGVFE 262
             E +L+ VF+
Sbjct: 240 LAEAMLKYVFK 250


>gi|319776245|ref|YP_004138733.1| asparaginyl tRNA synthetase [Haemophilus influenzae F3047]
 gi|329123384|ref|ZP_08251948.1| asparagine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317450836|emb|CBY87060.1| asparaginyl tRNA synthetase [Haemophilus influenzae F3047]
 gi|327470966|gb|EGF16421.1| asparagine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 467

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 125/318 (39%), Gaps = 59/318 (18%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE 
Sbjct: 13  GKVAIGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYE------SEI 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           +    G  +  + + + +      +EL A+K+E+    E+    P+  +R    SI +  
Sbjct: 67  LRLTTGCSVIVTGKVVESPSEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLR 123

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV
Sbjct: 124 EVAHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RV 180

Query: 187 NQGSFYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPR 226
           +      LP+         Q +   +  L  SG            + +   P FR E+  
Sbjct: 181 STLDLENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 240

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG--------- 267
           + R   EF+ ++ E++F    D     E++L+ VF           +F            
Sbjct: 241 TTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITR 300

Query: 268 --NTVSNNFLRICYDDAI 283
             N V+++F++I Y DAI
Sbjct: 301 LENFVNSDFVQIDYTDAI 318


>gi|322828174|gb|EFZ32092.1| lysyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 580

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 89/175 (50%), Gaps = 11/175 (6%)

Query: 91  TGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLD--LRRDTLHKNIVKRTR 147
           TG+  ++A +I +LS     LP   +G     +  RF+ R+LD  + R+ + +  V R++
Sbjct: 175 TGEFSMNAFEITLLSTCYHMLPDGWYGLSSIEQ--RFRQRYLDFIVNRENI-QTFVTRSK 231

Query: 148 IINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLL 205
           +I  +R      +F+E  TP+L   +    AR F+   + +NQ  +  +  AP+ Y + L
Sbjct: 232 VIRYIRNFFEDLDFLEVETPVLNQIAGGAAARPFITHHNELNQRMYLRI--APELYLKEL 289

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +  G DR +++   FR+E       P EF  ++   ++ + +D + T E++  G+
Sbjct: 290 VVGGMDRVYELGKQFRNEGIDLTHNP-EFTSVEAYWAYADYNDWMRTTEDLFYGL 343



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTV 579
           G  +A +  +PP GG   GIDR+VM L    N++EV LFP M       L   P T+
Sbjct: 515 GFVQALEHALPPTGGWGLGIDRLVMFLTSQANIKEVLLFPAMKPETSSSLTYPPGTL 571


>gi|184154700|ref|YP_001843040.1| lysyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|260663748|ref|ZP_05864636.1| lysyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|238692942|sp|B2GA78|SYK_LACF3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|183226044|dbj|BAG26560.1| lysyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|260551799|gb|EEX24915.1| lysyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|299782822|gb|ADJ40820.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Lactobacillus
           fermentum CECT 5716]
          Length = 497

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VML+  AK++R+V LFP
Sbjct: 456 ALEYGMPPTGGLGVGIDRMVMLMTDAKSIRDVLLFP 491



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 21/247 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F D+ D  G  Q     D    E  K  +   +    G+    
Sbjct: 62  VTIAGRMIGKRGSGKASFADLLDRGGKIQFYVRQDMVGEEAYKLFKESDLGDFWGI---- 117

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRDT 137
           + + I   +  G++ + A+KI  LS A   PLP  +   + PE + ++ R+LDL   R++
Sbjct: 118 TGDVIKTRM--GELTVRAEKITFLSKALR-PLPDKYHGLQDPELV-YRQRYLDLITNRES 173

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILT--ASSPEGARDFLVPSRVNQGSFYALP 195
             +    RT+II ++R  M    F+E  TPIL   AS  E AR F+          Y   
Sbjct: 174 FER-FQTRTKIIKAVRRYMDDNGFLEVETPILENIASGAE-ARPFVTHHNALNIDMYMRI 231

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
               + K+L++  G +R +++   FR+E  DP  +    EF  ++   ++ + +D++   
Sbjct: 232 ATELRLKRLIVG-GMERVYELGRIFRNEGMDPYHN---PEFDTMETYAAYFDFNDVMKET 287

Query: 254 ENVLRGV 260
           E + +  
Sbjct: 288 EGIFKAA 294


>gi|254443736|ref|ZP_05057212.1| lysyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198258044|gb|EDY82352.1| lysyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 521

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           ++L   G EIA      +  +V  + F     + E  ++         + GMPP GG+  
Sbjct: 438 FELCIGGMEIAPAYSEQNDPDVQREMFEKQ--AGEETQDMDEDFLETLEYGMPPAGGLGM 495

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           GIDRIV+LL  A+N+R+V L+P
Sbjct: 496 GIDRIVILLTEAENIRDVILYP 517



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/253 (20%), Positives = 110/253 (43%), Gaps = 11/253 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +  +R  G   F+ I+D  GI Q+    D     I     +++     G ++  
Sbjct: 93  VSVAGRLVVIRKMGKAQFVKIQDQAGIIQLYVRLDG----IGADEYADFKKLDLGDIIGV 148

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG+I + A +  ++S +   PLP           +++ R LDL  +   +
Sbjct: 149 EGQLFQTK--TGEISIRASRYALVSKSLR-PLPEKFHGLTDAEQKYRQRHLDLIMNKESR 205

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAP 198
                R+RI++ +R  +    F+E  TP+    +    A+ F+         F+ +  + 
Sbjct: 206 ERFFNRSRIVSGIRRYLEDRKFLEVETPVFQNIAGGAAAKPFVTHHNTLDRDFF-MRISL 264

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  G+DR F+I   FR+E   S R   EF  L++  ++ +   ++  ++ ++R
Sbjct: 265 ELYLKRLLVGGYDRVFEIGRNFRNEGI-SRRHNPEFTMLEVYQAYSDYRGMMELIQGLIR 323

Query: 259 GVFEEFSNGNTVS 271
            +  +   G  + 
Sbjct: 324 HLVTDILGGKEIK 336


>gi|145634910|ref|ZP_01790617.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|229845116|ref|ZP_04465251.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|145267776|gb|EDK07773.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|229811952|gb|EEP47646.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 467

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 111/275 (40%), Gaps = 38/275 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      +E 
Sbjct: 13  GKVAIGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYE------NEI 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           +    G  +  + + + +      +EL A+K+E+    E+    P+  +R    SI +  
Sbjct: 67  LRLTTGCSVIVTGKIVESPAEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLR 123

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV
Sbjct: 124 EVAHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RV 180

Query: 187 NQGSFYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPR 226
           +      LP+         Q +   +  L  SG            + +   P FR E+  
Sbjct: 181 STLDLENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 240

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ ++ E++F   +D     E++L+ VF
Sbjct: 241 TTRHLAEFWMVEPEVAFATLEDNAKLAEDMLKYVF 275


>gi|331000231|ref|ZP_08323915.1| lysine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329572397|gb|EGG54050.1| lysine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 511

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 18/210 (8%)

Query: 91  TGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRI 148
           TG++ +  +   +L+     PLP  F     PE+ R++ R++DL   ++  +  + R++ 
Sbjct: 139 TGELSVRVKNFRLLT-KNIRPLPDKFHGLSDPET-RYRQRYVDLIMNESTRRTFMIRSKA 196

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
           I   R  M+  +F+E  TP+L    P GA  + F+          Y L  AP+ Y + L+
Sbjct: 197 IAETRKFMMEHHFMEVETPML-HPIPGGANAKPFITHHNALDMDMY-LRIAPELYLKRLV 254

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF-- 264
             GF+R F++   FR+E       P EF  ++   ++ E   +++  E +LR V E+   
Sbjct: 255 VGGFERVFELNRSFRNEGVDVRHNP-EFTMMEFYAAYKEYHWLMDYTEKLLRTVAEKTIG 313

Query: 265 -----SNGNTV--SNNFLRICYDDAIRRYG 287
                  G+T+  +  F R+   +A+ +Y 
Sbjct: 314 TAVIQYQGHTIDLTKPFDRLTAKEAVLKYA 343



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   G+DR VMLL  + ++R+V LFP
Sbjct: 469 RALEYGLPPTGGCGVGLDRFVMLLTDSPSIRDVLLFP 505


>gi|227111938|ref|ZP_03825594.1| asparaginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 466

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 122/334 (36%), Gaps = 71/334 (21%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV----RSEWVLC 72
           V S V + GWV R R          RD       +A  D +CF   ++V     S +   
Sbjct: 16  VDSEVTVRGWV-RTR----------RDSKAGISFIAVYDGSCFNPLQAVVNNNLSNYQDD 64

Query: 73  IDGLVMSRSAETINANIIT----GQ-IELSAQKIEILS-VAEELPLPVFGEREYPESIRF 126
           +  L    S E I  N++     GQ  EL A  + ++  V +    P+  +R    SI +
Sbjct: 65  VLRLTTGCSVE-ITGNVVASPGEGQSFELQATNVNVVGWVDDPDTYPMAAKRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +     R   EN +   STP++TAS  EGA +     
Sbjct: 121 LREVAHLRPRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLITASDTEGAGEMF--- 177

Query: 185 RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDED 224
           RV+      LP+  Q                    Q      A      +   P FR E+
Sbjct: 178 RVSTLDLENLPRTEQGKVDFSEDFFGKEAFLTVSGQLNGETYACALSNVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT--------------- 269
             + R   EF+ ++ E++F   DD+    EN+L+ VF+   N                  
Sbjct: 238 SNTSRHLAEFWMIEPEVAFASLDDVAALAENLLKYVFQAVLNERADDMAFFAERVDKEAI 297

Query: 270 ------VSNNFLRICYDDAIRRYGTDKPDLRNPI 297
                 VS++F ++ Y DA+           NP+
Sbjct: 298 TRLEKFVSSDFAQVDYTDAVEILLNCGQQFENPV 331


>gi|225684069|gb|EEH22353.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 541

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 6/84 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI--SKEVVENRFGGLYRAFQCGMPPHGGI 539
           YD    G EI SG  R + ++ +  A    G+  + E  E+  G    AF+ G PPH G 
Sbjct: 454 YDFFMRGEEIMSGAQRINDAKELEAAMVAKGLDPNDEGFEDYIG----AFRQGCPPHAGG 509

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             G++RIVM  LG  N+R  +LFP
Sbjct: 510 GLGLNRIVMFFLGLPNIRLATLFP 533


>gi|16082537|ref|NP_394082.1| asparagine synthetase A [Thermoplasma acidophilum DSM 1728]
          Length = 314

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 17/157 (10%)

Query: 149 INSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I S+    + E  FIE    I++  +         P+    G  Y+L ++   +K LL  
Sbjct: 32  IRSITSEFLKERGFIEVPPVIISVLTDPLNHPVFDPTIDYYGYKYSLTKSMIFHKHLL-T 90

Query: 208 SGFDRYFQIAPCFRDEDP---RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
             FDR F  +P  R E+    ++ R   EF QLD+EM    +D++++  E+++  +F++ 
Sbjct: 91  KHFDRIFTFSPNIRLEEEDKVKTGRHLAEFTQLDLEMKGASRDEVMSLGEDMIIDLFKKI 150

Query: 265 SNGNT------------VSNNFLRICYDDAIRRYGTD 289
              N              S  F RI Y DA ++YG D
Sbjct: 151 KRSNEEDLKFFGRDLRIPSKPFKRIAYLDAYKQYGED 187


>gi|260582483|ref|ZP_05850274.1| asparaginyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094463|gb|EEW78360.1| asparaginyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 477

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 38/275 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE 
Sbjct: 23  GKVAIGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYE------SEI 76

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           +    G  +  + + + +      +EL A+K+E+    E+    P+  +R    SI +  
Sbjct: 77  LRLTTGCSVIVTGKVVESPSEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLR 133

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV
Sbjct: 134 EVAHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RV 190

Query: 187 NQGSFYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPR 226
           +      LP+         Q +   +  L  SG            + +   P FR E+  
Sbjct: 191 STLDLENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 250

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ ++ E++F    D     E++L+ VF
Sbjct: 251 TTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVF 285


>gi|254220959|pdb|3E9H|A Chain A, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysylsulfamoyl Adenosine
 gi|254220960|pdb|3E9H|B Chain B, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysylsulfamoyl Adenosine
 gi|254220961|pdb|3E9H|C Chain C, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysylsulfamoyl Adenosine
 gi|254220962|pdb|3E9H|D Chain D, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysylsulfamoyl Adenosine
 gi|254220963|pdb|3E9I|A Chain A, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysine Hydroxamate-Amp
 gi|254220964|pdb|3E9I|B Chain B, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysine Hydroxamate-Amp
 gi|254220965|pdb|3E9I|C Chain C, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysine Hydroxamate-Amp
 gi|254220966|pdb|3E9I|D Chain D, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysine Hydroxamate-Amp
 gi|307568117|pdb|3A74|A Chain A, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With Diadenosine Tetraphosphate (Ap4a)
 gi|307568118|pdb|3A74|B Chain B, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With Diadenosine Tetraphosphate (Ap4a)
 gi|307568119|pdb|3A74|C Chain C, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With Diadenosine Tetraphosphate (Ap4a)
 gi|307568120|pdb|3A74|D Chain D, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With Diadenosine Tetraphosphate (Ap4a)
          Length = 493

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 129/311 (41%), Gaps = 39/311 (12%)

Query: 5   RTHSC-------GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH         GDL   ++      V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 33  RTHKAEELFELYGDLSKEELEEQQIEVAVAGRIMTKRGMGKAGFAHIQDVTGQIQIYVRQ 92

Query: 55  DSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EEL 110
           D      +E+ K      ++ + G +              G++ +     E L+ A   L
Sbjct: 93  DDVGEQQYELFKISDLGDIVGVRGTMFKTKV---------GELSIKVSSYEFLTKALRPL 143

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           P    G ++  +  R++ R+LDL  +    K  + R+ II SMR  + +  ++E  TP++
Sbjct: 144 PEKYHGLKDIEQ--RYRQRYLDLIMNPESKKTFITRSLIIQSMRRYLDSHGYLEVETPMM 201

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            A +    AR F+        + Y +  A + + + L+  G ++ ++I   FR+E   + 
Sbjct: 202 HAVAGGAAARPFITHHNALDMTLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTR 260

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICY 279
             P EF  L++  ++ +  DI+   EN++  +  E      +         +  + R+  
Sbjct: 261 HNP-EFTMLELYEAYADFRDIMKLTENLIAHIATEVLGTTKIQYGEHLVDLTPEWRRLHM 319

Query: 280 DDAIRRY-GTD 289
            DAI+ Y G D
Sbjct: 320 VDAIKEYVGVD 330



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 453 ALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLFP 488


>gi|226293889|gb|EEH49309.1| asparaginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 597

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/240 (20%), Positives = 100/240 (41%), Gaps = 5/240 (2%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VH +R    +IF+ + D YG+ Q +   D        ++  E  + I G +
Sbjct: 109 GTRVRVVGRVHHLRSQKDMIFVTLSDGYGLLQCIFTGDLVKTYDMMTLTLETSIAIHGEM 168

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
             R+   +N      ++      I   +  ++  +     R+      +  R L LR +T
Sbjct: 169 --RAVPPMNHAYDDRELHADFFTIIGRAAGDKEAITTRVARDSDPHTLYDNRHLVLRGET 226

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R   + + R     +  +E + P +  +  EG           + ++  L Q+
Sbjct: 227 SSSVMKVRAATLRAFRKAFEEKGMLEVTPPAMVQTQVEGGSTLFEFDYYGEKAY--LTQS 284

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  + S  D  F + P FR E   + R   E+  ++ E+ F+   D+L+ +E+++
Sbjct: 285 SQLYLETCLPSLGD-VFCVCPSFRAEKSLTRRHLSEYTHVEAELDFISFTDLLDHLEDMI 343


>gi|86739134|ref|YP_479534.1| lysyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86565996|gb|ABD09805.1| lysyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 483

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 131/313 (41%), Gaps = 53/313 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VRL+G V   R  GG+IF  ++D  G  QV  +      E+ K    EW         SR
Sbjct: 36  VRLAGRVVLWRRMGGLIFGHLQDRSGRVQVSLSKTDLGAEVVK----EW---------SR 82

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--REYPES--------IRFKYRF 130
           + +  +   I G +  + +    ++++E   + V     R  P+          R++ R+
Sbjct: 83  AVKIGDFVGIAGSLYTTRRGERTVAISE---MTVLNRTVRALPDKWQGLSNVEARYRRRY 139

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILT-ASSPEGARDFLVPSRVNQ 188
           LDL  +   +   +    I     R++ +N F+E  TPIL  A+S   AR F+       
Sbjct: 140 LDLLVNAESRERFQTRANIIRRIRRLLDDNDFLEVETPILQEAASGAAARPFITRHNALG 199

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM--------- 239
             FY L  +P+ Y + ++   +DR +++   FR+E   S  L  EF  L+          
Sbjct: 200 EDFY-LRISPETYLKRIVVGAYDRVYELGRNFRNEGMDSSHLQ-EFTMLEWYAAYWDYRD 257

Query: 240 EMSFVEQ------DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI-RRYGTDKPD 292
            M+FV +      DD+L T      GV  +F        ++  I Y   + RR G D   
Sbjct: 258 NMAFVRELILTVLDDVLGTRAVTYEGVKLDF------GADWPEIDYRAEVERRTGIDLTV 311

Query: 293 LRN-PIIMHNVTE 304
           +R+ P +   V E
Sbjct: 312 VRDLPTLRARVAE 324



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G+  GIDR V LL GA  +R+V LFP
Sbjct: 431 AMEYGMPPMSGLGLGIDRFVALLTGAPTLRDVVLFP 466


>gi|85084624|ref|XP_957348.1| asparaginyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|28918438|gb|EAA28112.1| asparaginyl-tRNA synthetase [Neurospora crassa OR74A]
          Length = 580

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 121/305 (39%), Gaps = 37/305 (12%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-------ANPDSACFEIAKSVRS 67
           S  G+ V++ G +HR+R      FL ++D YG  Q V        N D+  F        
Sbjct: 148 SKKGTRVKVFGRIHRLRVQKHATFLTLKDGYGFLQCVLPAGDLTKNYDALLFA------Q 201

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA----EELPLPVFGEREYPES 123
           E  L + G +    A    A    G+ EL     ++L  A    + +   V  +++  ++
Sbjct: 202 ETALVLYGELKKLPA---GATAPDGR-ELQVDYYKVLGHAPSDLDAITNKVSRDQDAWDA 257

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
                R L LR +     +  R  +  +         F + S P +  +  EG       
Sbjct: 258 AMLDNRHLVLRGENASALMKLREFVELAFVDTYRELEFRKVSPPAMVQTQVEGGSTLFKY 317

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++  L Q+ Q Y + ++AS   + + I   FR E   + R   E+  ++ E+ F
Sbjct: 318 DYYGEEAY--LTQSSQLYLETVLAS-MGQVYCIEKSFRAEKSLTRRHLSEYTHVEAELDF 374

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS-------------NNFLRICYDDAIRRYGTDK 290
           +E +D+L+ +E ++  V +   N  T +               FLR+ Y+DAI       
Sbjct: 375 IEFNDLLDHLEEIISKVVDRVLNNETAAGYLKVLNPDFKKPEKFLRMKYEDAIEWLNKQD 434

Query: 291 PDLRN 295
           P + N
Sbjct: 435 PPILN 439


>gi|90579564|ref|ZP_01235373.1| asparaginyl-tRNA synthetase [Vibrio angustum S14]
 gi|90439138|gb|EAS64320.1| asparaginyl-tRNA synthetase [Vibrio angustum S14]
          Length = 466

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 108/278 (38%), Gaps = 50/278 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV-------RSE 68
           V S V + GW+   R    GI FL I D             +CF+  ++V         E
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNELNNYQE 63

Query: 69  WVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
            VL +          TI A+   GQ  EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGTIVASPAKGQDFELAATNVKVVGWVEDADSYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + FI  S P++TAS  EGA +     
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGFIWMSAPLITASDCEGAGEMF--- 177

Query: 185 RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDED 224
           RV+      +P   +                    Q      A    + +   P FR E+
Sbjct: 178 RVSTLDLANVPMTVEGNVDFDKDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             + R   EF+ ++ E++F E DD+    E++L+ VF+
Sbjct: 238 SNTSRHLAEFWMVEPEVAFAELDDVAKLAEDMLKYVFK 275


>gi|324507490|gb|ADY43176.1| Lysyl-tRNA synthetase [Ascaris suum]
          Length = 578

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 111/249 (44%), Gaps = 28/249 (11%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPD-----SACFEIAKSVRSEWVLCID 74
           V ++G +   R  GG +IF D+       Q++AN        A  ++ + ++   ++ + 
Sbjct: 111 VNVAGRIFSKRESGGKLIFYDLHGEGTRVQILANARFHKGREAFGDVHERIKRGDIIGVR 170

Query: 75  GL-VMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRF 130
           G    S+S E            LS   IE++ +      LP   FG +   +  R++ R+
Sbjct: 171 GHPAKSKSGE------------LSVIPIEVVQLTPCLHMLPHTHFGLKN--QETRYRMRY 216

Query: 131 LDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           LDL    ++    V R ++I  +R  +    F+E  TP++   +    A+ F+       
Sbjct: 217 LDLIMNPSVKDKFVIRAKMITFLRRYLDNLGFLEVETPMMNQIAGGATAKPFITHHNELD 276

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              + L  AP+ Y ++L+  G DR +++   FR+E       P EF   +  M++ + +D
Sbjct: 277 MDLF-LRVAPELYHKMLVVGGIDRVYEVGRLFRNEGIDQTHNP-EFTTCEFYMAYADYED 334

Query: 249 ILNTMENVL 257
           ++   E++L
Sbjct: 335 LIKLTEDLL 343



 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M+   + N++EV  FP
Sbjct: 522 ALEYGLPPTAGWGMGIDRLTMVFTDSNNIKEVLFFP 557


>gi|289620070|emb|CBI53514.1| unnamed protein product [Sordaria macrospora]
          Length = 580

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 120/305 (39%), Gaps = 37/305 (12%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-------ANPDSACFEIAKSVRS 67
           S  G+ V++ G +HR+R      FL ++D YG  Q V        N D+  F        
Sbjct: 148 SKKGTRVKVYGRIHRLRAQKHATFLTLKDGYGFLQCVLPAGDLTKNYDALLFA------Q 201

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL----SVAEELPLPVFGEREYPES 123
           E  L + G +    A    A    G+ EL     ++L    S  E +   V  +++  ++
Sbjct: 202 ETALVLYGELKKLPA---GATAPDGR-ELQVDYFKVLGHAPSDTEAITNKVSRDQDAWDA 257

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
                R L LR +     +  R  +  +         F + S P +  +  EG       
Sbjct: 258 AMLDNRHLVLRGENASALMKLREFVELAFVDTYRELEFRKVSPPAMVQTQVEGGSTLFKY 317

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++  L Q+ Q Y + ++AS   + + I   FR E   + R   E+  ++ E+ F
Sbjct: 318 DYYGEEAY--LTQSSQLYLETVLAS-MGQVYCIEKSFRAEKSLTRRHLSEYTHVEAEIDF 374

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS-------------NNFLRICYDDAIRRYGTDK 290
           +E  D+L+ +E ++  V +   N  T +               FLR+ Y++AI       
Sbjct: 375 IEFSDLLDHLEEIISKVVDRVLNDETAAGYLKVLNPEFKKPEKFLRMKYEEAIEWLNKQD 434

Query: 291 PDLRN 295
           P + N
Sbjct: 435 PPILN 439


>gi|163754082|ref|ZP_02161205.1| lysyl-tRNA synthetase [Kordia algicida OT-1]
 gi|161326296|gb|EDP97622.1| lysyl-tRNA synthetase [Kordia algicida OT-1]
          Length = 561

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 16/251 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS-VRSEWVLCID-G 75
           G  V ++G +   R  G   F +++D  G  QV  N D  C    KS   + +   +D G
Sbjct: 46  GKQVIIAGRLMSRRIQGSASFAELQDADGKIQVYFNRDEICPGEDKSHYNNVYKKLLDIG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP------VFGEREYPESIRFKY 128
             +    E     +  G+  +  +   +LS A + LPLP      V+ + + PE  R++ 
Sbjct: 106 DFIGIEGELFTTKV--GEKTVMVKNFTLLSKALKPLPLPKEKDGVVYDKFDDPEQ-RYRQ 162

Query: 129 RFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R+ DL  +   K + VKRT++ N+MR       + E  TPIL        AR F+     
Sbjct: 163 RYADLVVNPEVKEVFVKRTKLFNAMRNFFNDAGYFEVETPILQPIPGGAAARPFVTHHNS 222

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ + 
Sbjct: 223 LNIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKDY 280

Query: 247 DDILNTMENVL 257
           + ++   E++L
Sbjct: 281 NWMMEFTESLL 291



 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L    +++EV  FP
Sbjct: 454 RALEYGMPPTSGLGIGMDRLIMYLTNNASIQEVLFFP 490


>gi|145633224|ref|ZP_01788955.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144986070|gb|EDJ92660.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 383

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 109/271 (40%), Gaps = 38/271 (14%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE +   
Sbjct: 17  IGESVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYE------SEILRLT 70

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLD 132
            G  +  + + + +      +EL A+K+E+    E+    P+  +R    SI +      
Sbjct: 71  TGCSVIVTGKVVESPAEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLREVAH 127

Query: 133 LRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV+   
Sbjct: 128 LRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RVSTLD 184

Query: 191 FYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPRSDRL 230
              LP+         Q +   +  L  SG            + +   P FR E+  + R 
Sbjct: 185 LENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRH 244

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
             EF+ ++ E++F    D     E++L+ VF
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVF 275


>gi|301170040|emb|CBW29644.1| asparaginyl tRNA synthetase [Haemophilus influenzae 10810]
          Length = 467

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 111/275 (40%), Gaps = 38/275 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      +E 
Sbjct: 13  GKVAIGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYE------NEI 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
           +    G  +  + + + +      +EL A+K+E+    E+    P+  +R    SI +  
Sbjct: 67  LRLTTGCSVIVTGKIVESPAEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLR 123

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV
Sbjct: 124 EVAHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RV 180

Query: 187 NQGSFYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPR 226
           +      LP+         Q +   +  L  SG            + +   P FR E+  
Sbjct: 181 STLDLENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 240

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ ++ E++F   +D     E++L+ VF
Sbjct: 241 TTRHLAEFWMVEPEVAFATLEDNAKLAEDMLKYVF 275


>gi|170717449|ref|YP_001784547.1| asparaginyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189083273|sp|B0UTU8|SYN_HAES2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|168825578|gb|ACA30949.1| asparaginyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 467

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 108/277 (38%), Gaps = 32/277 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   VG  V + GW+   R    G+ FL I D   +   Q + N D   +E      +E 
Sbjct: 13  GKITVGETVTVRGWIRTRRDSKAGLSFLAIYDGSCFDPIQAIVNNDIENYE------TEI 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKY 128
           +    G  +  + + + +      +EL A KIE+   V +    P+  +R    SI +  
Sbjct: 67  LRLTTGCSVVVTGKIVESPAEGQAVELQADKIEVSGWVDDPETYPMSAKRH---SIEYLR 123

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   +TP++TAS  EGA +    S +
Sbjct: 124 EVAHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTL 183

Query: 187 NQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDR 229
           +  +     +    + Q        L  SG            + +   P FR E+  + R
Sbjct: 184 DLENLPRTDKGAVDFSQDFFGKESFLTVSGQLNGESYACALSKIYTFGPTFRAENSNTTR 243

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
              EF+ ++ E++F    D     E++L+ VF    N
Sbjct: 244 HLAEFWMVEPEIAFATLADNAKLAEDMLKYVFRAVLN 280


>gi|171741192|ref|ZP_02916999.1| hypothetical protein BIFDEN_00264 [Bifidobacterium dentium ATCC
           27678]
 gi|283455445|ref|YP_003360009.1| lysyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|306823487|ref|ZP_07456862.1| lysine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309802618|ref|ZP_07696722.1| lysine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|171276806|gb|EDT44467.1| hypothetical protein BIFDEN_00264 [Bifidobacterium dentium ATCC
           27678]
 gi|283102079|gb|ADB09185.1| lysS Lysyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|304553194|gb|EFM41106.1| lysine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308220682|gb|EFO76990.1| lysine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 558

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 33/264 (12%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I + A + PLP    ++  E  R +  ++ +  D   +N+V+ R++ +
Sbjct: 181 TGELSVFATEWAIAAKALQ-PLPAL-HKDLNEDTRTRKPYIGMIADEKIRNMVRNRSKAV 238

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R      +FIE  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 239 ASLRKTFADHDFIEVETPMLQTVHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 297

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           G DR F+I   FR+E   +   P        E + VE               ++ + N +
Sbjct: 298 GIDRVFEINRDFRNEGADATHAP--------EFTMVE--------------AYQAYGNYD 335

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           T+     ++  D A+  +G+ K      + + + TE+ +  E++  S   S++       
Sbjct: 336 TIGALVKQLVQDTAMDVFGSHK------VTLLDGTEYDLGGEWKTISMYDSLSEALGEEI 389

Query: 329 IPAKGGGGNRAFCDRMNEWARSQG 352
           +P  G        + + E A   G
Sbjct: 390 VPNGGPDNPGTSVEHLGEIADRLG 413



 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K  +               A   GMP
Sbjct: 467 KWDLYVRGFELATG--YSELNDPVVQRERFVAQAKAALAGDEEACDIDEDFLEALGVGMP 524

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 525 PAGGMGMGIDRLLIALTGA-TIRETITFPL 553


>gi|218245720|ref|YP_002371091.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|218166198|gb|ACK64935.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 573

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 69/340 (20%), Positives = 139/340 (40%), Gaps = 33/340 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G + F  ++D  G  Q+  +    D++  E+  +  +   L   G +
Sbjct: 68  VAIAGRIIARRVFGKLAFFSLQDETGTIQLYLDKQQIDTSMTEVTDAFNTLKKLTDTGDI 127

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
           +             G++ +  Q   IL+ +  LPLP           R++ R++DL  + 
Sbjct: 128 LGVVGTIKRTE--KGELSVKVQTYTILTKSL-LPLPDKWHGLTDTEKRYRQRYVDLIVNP 184

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALP 195
            + +   +R +I  S+R  +    FIE  TP+L + +    AR F+          Y L 
Sbjct: 185 QVRQTFRRRAQITASIRRYLDENGFIEIETPVLQSEAGGAEARPFITYHNTLDMELY-LR 243

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + + + L+  GF++ F++   FR+E   +   P EF  +++  ++ +  D++   E 
Sbjct: 244 IATELHLKRLIIGGFEKVFELGRIFRNEGVSTKHNP-EFTSIEVYQAYADYFDMMELTEA 302

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEHFVHSEFR 312
           ++       +N        L++ Y +        + DL  P   + M ++ +     +F 
Sbjct: 303 LI-------TNAAQTVLGTLKLTYQET-------EIDLSTPWRRVTMTDIVKEKTGLDFD 348

Query: 313 VFSKILSVNPGYEVWAI------PAKGGGGNRAFCDRMNE 346
            F+   S     +   I      P+ G   N AF  ++ E
Sbjct: 349 SFTDFESAKEAAKKAGIDVPDDCPSLGKLMNEAFEQKVEE 388



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 470 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPL 506


>gi|283833779|ref|ZP_06353520.1| asparagine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291070442|gb|EFE08551.1| asparagine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 466

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 107/277 (38%), Gaps = 48/277 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNQ 63

Query: 76  LVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFK 127
            V+  +  T  + I+TG++  S    Q  EI +   E+   V     YP      SI + 
Sbjct: 64  DVLRLT--TGCSVIVTGKVVASPGQGQSFEIQATEVEVTGWVEDPDTYPMAAKRHSIEYL 121

Query: 128 YRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
                +R  T     V R R  +  ++      + F   STP++TAS  EGA +     R
Sbjct: 122 REVAHMRPRTNMIGAVARVRHTLAQALHRFFHEQGFFWVSTPLITASDTEGAGEMF---R 178

Query: 186 VNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDP 225
           V+      LP+  Q                    Q      A    + +   P FR E+ 
Sbjct: 179 VSTLDLENLPRNDQGKVDFDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENS 238

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            + R   EF+ L+ E++F   DD+    E +L+  F+
Sbjct: 239 NTSRHLAEFWMLEPEVAFANLDDVAGLAEAMLKYAFK 275


>gi|119194865|ref|XP_001248036.1| aspartyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
          Length = 565

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 6/84 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI--SKEVVENRFGGLYRAFQCGMPPHGGI 539
           YD    G EI SG  R +++E +  A    G+    E  E+  G    AF+ G  PH G 
Sbjct: 478 YDFFMRGEEIMSGAQRINVAEELEAAMIARGVDPKAEGFEDYLG----AFRQGCAPHAGG 533

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             G++RIVM  LG  N+R  +LFP
Sbjct: 534 GLGLNRIVMFFLGLPNIRLATLFP 557



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 32/198 (16%)

Query: 94  IELSAQKIEILS-VAEELPLPVF-GEREYPES-----------------IRFKYRFLDLR 134
           +EL   KI +++  A++LP+ V   ER  PES                  R   R LDL+
Sbjct: 184 MELHITKIYMIAQAAQQLPMQVKDAERPPPESNEEGQVDSEGTPIVTLKTRLDNRILDLQ 243

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECS-----TPILTASSPEGARDFLVPSRVNQG 189
            +T      +    I+S   ++ AE  ++       T  L+ ++ EG  D        + 
Sbjct: 244 TET-----SQAITWISSGVAQLFAEFMLKSGARWIFTSKLSGAATEGGADVFELGYFKRK 298

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
           ++  L Q+PQ  KQ+ +A      F+I P FR E+  + R   EF  LD E +F     +
Sbjct: 299 AY--LSQSPQLGKQMCIAGDMMNVFEIGPVFRAEESNTHRHLTEFIGLDFERTFHRHYHE 356

Query: 249 ILNTMENVLRGVFEEFSN 266
           +L+  E +L  +  E   
Sbjct: 357 VLSFAEELLVFILSELKT 374


>gi|15834783|ref|NP_296542.1| lysyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270284950|ref|ZP_06194344.1| lysyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270288976|ref|ZP_06195278.1| lysyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336348|ref|ZP_07224550.1| lysyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|11387148|sp|Q9PLE1|SYK_CHLMU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|7190200|gb|AAF39039.1| lysyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 524

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 4/150 (2%)

Query: 122 ESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           + IR++ R+ DL   + + K  + R+RI+  +R  M  ++F+E  TP+L T      A  
Sbjct: 171 KEIRYRKRWADLISSEEVRKTFLARSRILKLIREYMDQQDFLEVETPVLQTIYGGAEATP 230

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+   +      +         K++L+  G  R ++I   FR+E       P EF  ++ 
Sbjct: 231 FVTTLKALHTEMFLRISLEIALKKILVG-GMSRVYEIGKVFRNEGIDRTHNP-EFTMIEA 288

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
             ++ + +D++  +EN++  V    +NG T
Sbjct: 289 YAAYWDYNDVMKCVENLVEYVVRALNNGET 318



 Score = 44.3 bits (103), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 24/33 (72%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP GG   GIDR+VM+L  A ++R+V  FP+
Sbjct: 485 GMPPAGGFGIGIDRLVMMLTDAASIRDVLYFPV 517


>gi|325677462|ref|ZP_08157126.1| lysine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325551709|gb|EGD21407.1| lysine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 1121

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 12/221 (5%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      S  G+ VR++G + R+R +GG+ F  +RD  G  QV+    +    +    
Sbjct: 667 THTVAAATSSPEGTRVRIAGRLLRIRTYGGVAFAVLRDWSGDIQVLIERTTVGDRL---- 722

Query: 66  RSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
             E+    D G +M  S     +    G++ L A +  +       PLP   +       
Sbjct: 723 -DEFSTDFDLGDLMEVSGTIGRSR--KGELSLLATEWRMNGKCLH-PLPDKWKGLTDAET 778

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLV 182
           R + R++DL  +   + ++  RT I+ S+R  +   +++E  TPIL        A  F+ 
Sbjct: 779 RVRQRYVDLAINPESRRLLAARTAIVKSLRDTLAGRDYLEVETPILQRIHGGANAAPFVT 838

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
                    Y L  AP+ + + L  +G ++ F+I   FR+E
Sbjct: 839 HINAYDLDLY-LRIAPELFLKRLCVAGMEKVFEIGRVFRNE 878



 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           R  ++E  L A      + E+ E+      +A +
Sbjct: 1028 AAKWDLVAWGVELGTAYSELTDPIDQRRRLTEQSLLAAGGDAEAMELDED----FLQALE 1083

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  G+DRIVML+ G  ++RE   FP ++
Sbjct: 1084 HAMPPTGGLGMGVDRIVMLITGG-SIRESLAFPFAK 1118


>gi|224367788|ref|YP_002601951.1| asparaginyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2]
 gi|223690504|gb|ACN13787.1| AsnS [Desulfobacterium autotrophicum HRM2]
          Length = 460

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 30/268 (11%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69
           LG       V + GWV   R      F+++ D   +   Q++A  D A +   + + +  
Sbjct: 11  LGSKTAMDSVVVKGWVRTKRNAKDFSFMEVNDGSCLKNIQIIAGADLANYPEVERITTGS 70

Query: 70  VLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            + + G +++   +        GQ  E+ A+++EI+S++ E   P+  +R   E +R   
Sbjct: 71  AISVTGPLVASPGK--------GQSWEVQAREVEIISLSPE-DYPLQKKRHTDEFLR-TI 120

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF-----LVP 183
             L  R +        R+ +I ++        F   S P++T S  EGA D      L P
Sbjct: 121 AHLRPRTNKFGAIFRIRSEVIQAIHMFYRDRGFYCLSAPVITGSDCEGAGDMFRVTSLDP 180

Query: 184 SRVNQ-----------GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + V +           G+   L  + Q   ++   S  D Y    P FR E+  + R   
Sbjct: 181 AEVARQGRMNFNEDFFGTQANLTVSGQLSAEMFALSLGDVY-TFGPTFRAENSNTSRHVA 239

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGV 260
           EF+ L+ EM+F + D  ++  E +++ +
Sbjct: 240 EFWMLEPEMAFCDLDGNMDHGEELVKAL 267


>gi|195998728|ref|XP_002109232.1| hypothetical protein TRIADDRAFT_53048 [Trichoplax adhaerens]
 gi|190587356|gb|EDV27398.1| hypothetical protein TRIADDRAFT_53048 [Trichoplax adhaerens]
          Length = 490

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 117/284 (41%), Gaps = 50/284 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           + + GWV   R    +IFL++ D    +++ V  P SAC +   ++ S    C  G ++ 
Sbjct: 52  ITIKGWVRLCRSQKNVIFLNVSDGSCASKLQVVLPASACTK-PPTIGSSVEAC--GELVE 108

Query: 80  RSAETINANIITGQI-ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
            S +        GQ+ EL A  I +L    +   P    R Y  S+ +  +F  LR  T 
Sbjct: 109 SSHK--------GQLYELQADTITVLGDMLDSNFPFVPGRRY--SLEYLRKFPHLRART- 157

Query: 139 HKNIVKRTRIINSMRCRMIAENFIE-----CSTPILTASSPEGARDFLVPSRVNQ----- 188
             N+ +    I S  C  + + F +       +PI+T+S  EGA D    +  N+     
Sbjct: 158 --NVFQALLRIRSQACMQLHKYFQDYYYTFIHSPIITSSDCEGAGDLFTVTPKNKENTDR 215

Query: 189 ------GSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                   F+  P     + Q + + LM+S     +   P FR E   +     EFY ++
Sbjct: 216 TDDQRINDFFNSPSFLTVSGQLHAEALMSS-LSHVYTFGPAFRAEKSHTRHHLAEFYMIE 274

Query: 239 MEMSFVEQDDIL-NTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
            E +  +  +IL ++ E+ ++   ++           L IC DD
Sbjct: 275 AESTRFDNMEILISSTEHFVKETIKK----------LLVICQDD 308



 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 5/102 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
           K +D  ++ AF + LV    E+  G +R    +++L       IS+E     +       
Sbjct: 394 KNDDDKTVAAFDF-LVPTIGELIGGSLREERFDLLLNNMKTFNISQE----SYSWYIDLR 448

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G   HGG   G +R +  +LG  N+R+V  FP     C L
Sbjct: 449 RYGTIRHGGFGMGFERFLQFILGLANIRDVMPFPRYSGSCKL 490


>gi|303257505|ref|ZP_07343517.1| lysine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302859475|gb|EFL82554.1| lysine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 511

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 18/210 (8%)

Query: 91  TGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRI 148
           TG++ +  +   +L+     PLP  F     PE+ R++ R++DL   ++  +  + R++ 
Sbjct: 139 TGELSVRVKNFRLLT-KNIRPLPDKFHGLSDPET-RYRQRYVDLIMNESTRRTFMIRSKA 196

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
           I   R  M+  +F+E  TP+L    P GA  + F+          Y L  AP+ Y + L+
Sbjct: 197 IAETRKFMMEHHFMEVETPML-HPIPGGANAKPFITHHNALDMDMY-LRIAPELYLKRLV 254

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF-- 264
             GF+R F++   FR+E       P EF  ++   ++ E   +++  E +LR V E+   
Sbjct: 255 VGGFERVFELNRSFRNEGVDVRHNP-EFTMMEFYAAYKEYHWLMDYTEKLLRTVAEKTIG 313

Query: 265 -----SNGNTV--SNNFLRICYDDAIRRYG 287
                  G+T+  +  F R+   +A+ +Y 
Sbjct: 314 TAVIQYQGHTIDLTKPFDRLTAKEAVLKYA 343



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   G+DR VMLL  + ++R+V LFP
Sbjct: 469 RALEYGLPPTGGCGVGLDRFVMLLTDSPSIRDVLLFP 505


>gi|260591365|ref|ZP_05856823.1| lysine--tRNA ligase [Prevotella veroralis F0319]
 gi|260536731|gb|EEX19348.1| lysine--tRNA ligase [Prevotella veroralis F0319]
          Length = 577

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G + ++EV LFP
Sbjct: 461 RALQYGMPPTSGIGIGIDRLVMLMTGKEYIQEVMLFP 497



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 33/223 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F +I+D  G  QV    D  C     E+   V  + +     +
Sbjct: 54  VTIAGRMMGRRIMGKASFAEIQDSKGRIQVYITRDDICPGEDKELYNKVFKKLLDIGDFI 113

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            + G V              G+I + A++I +LS + + PLP+        + + E PE 
Sbjct: 114 GVKGYVFKTQ---------MGEISIHAKEITLLSKSLK-PLPIVKYKDGEAYDKFEDPEQ 163

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDF 180
            R++ R++DL   D +    +KR  ++ +MR       + E  TP L  S P GA  R F
Sbjct: 164 -RYRQRYVDLVVNDGVKDTFLKRATVLRTMRQFFDEAGYTEVETPTLQ-SIPGGASARPF 221

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           +          Y +  A + Y + L+  GF+  ++I   FR+E
Sbjct: 222 ITHFNALNIDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNE 263


>gi|42522288|ref|NP_967668.1| lysyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|39574819|emb|CAE78661.1| lysyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
          Length = 405

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 4/80 (5%)

Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +CN F E+    ++   S+  LQ  S +      +++ F   ++  + G+PP GGIA G+
Sbjct: 326 LCNAFHELNDPTVQRLRSQEDLQKKSEMHKEPVSLDDEF---FQCLEAGLPPSGGIALGV 382

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           +R+ M LLG +N+ ++ LFP
Sbjct: 383 ERLFMALLGLQNISDLRLFP 402



 Score = 37.4 bits (85), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 7/108 (6%)

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA---LPQAPQQYKQLL 205
           + S+R   +++ F+E  TP L           +  + +  GS      LP +P+ + +  
Sbjct: 103 LQSLREFFVSKGFVELKTPSLVVCPGTEPSLDVFSTNLKIGSRQQKLFLPTSPELHLKKA 162

Query: 206 MASGFDRYFQIAPCFRD----EDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +A G ++ F++APCFR+    E  + + L  E+Y+    +  +++D +
Sbjct: 163 LALGAEKIFELAPCFRNGEVTERHQPEFLMLEWYRAYASLKLIKEDTV 210


>gi|297838599|ref|XP_002887181.1| hypothetical protein ARALYDRAFT_894608 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333022|gb|EFH63440.1| hypothetical protein ARALYDRAFT_894608 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 497

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 110/269 (40%), Gaps = 38/269 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G    G  V++SGWV + R  G     FL++ D      +    D++  +++K V +   
Sbjct: 48  GAGLAGQKVQISGWVKKGREQGKGTFAFLEVNDGSCAANLQVKVDASASDLSKLVTTGTS 107

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQK-IEILSVAE--ELPLPVFGEREYPESIRFK 127
           L ID  +               +IELSA+K I++ +V +  + P P+   +   E +R  
Sbjct: 108 LTIDSCLKIPP----QGKATKQKIELSAEKVIDVGTVDQHGKTPYPIPKTKLTLEYLRDH 163

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC--STPILTASSPEGARD-FLVPS 184
             F   R  T     V R R    +   +  +    C   TPI+T S  EGA + F V +
Sbjct: 164 TNF---RARTTTMAAVTRIRHKICLAAHVFCDKHDICYIHTPIITTSDCEGAGEMFQVTT 220

Query: 185 RVNQGS------------------FYA----LPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
            +NQ                    F+A    L  + Q + +    S  D Y    P F+ 
Sbjct: 221 LINQSDKLETGLPRKHGKIDYSQDFFARQAYLTVSGQLHAETYACSMGDVY-TFGPTFQA 279

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           E   + R   EF+ +++E++F   ++ +N
Sbjct: 280 EKSHTSRHLAEFWMVEVELAFAGVEEAMN 308


>gi|255720376|ref|XP_002556468.1| KLTH0H14080p [Lachancea thermotolerans]
 gi|238942434|emb|CAR30606.1| KLTH0H14080p [Lachancea thermotolerans]
          Length = 468

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 113/254 (44%), Gaps = 22/254 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGIT----QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           L GW+  VR    + F+D++D  G T    ++V        ++ K +R+   L +   + 
Sbjct: 25  LCGWIKSVRLLKKLAFIDLQD--GTTPNPLKLVVRRSEDGSDMLKQLRTGQSLMVKDALW 82

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF--KYRFLDLRRD 136
             +   +       ++E  A   E L V  ++P     ++++  S+ F      L  R +
Sbjct: 83  KATPSRLQP----FELETDASP-ECLQVLGQVPASYPLQKKH-HSLAFLRSNPTLKHRSN 136

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR----VNQGSFY 192
            L   +  R+ + +S+     +++F + S P+LT+   EGA +            + S++
Sbjct: 137 YLGSLLRFRSCVESSLTQFFDSQDFTKVSPPVLTSGDCEGAGELFRAESNAHIARKTSYF 196

Query: 193 ALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
             P       QL   ++A   +R + + PCFR E+  ++R   EF+ L+ E+ +V+    
Sbjct: 197 GRPTYLTVSTQLHLEVLAMALNRVWTLTPCFRAEESDTNRHLAEFWMLETELCYVQNVKG 256

Query: 249 ILNTMENVLRGVFE 262
           +    E++L+ V E
Sbjct: 257 LTKVAEHMLKHVVE 270



 Score = 40.4 bits (93), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 7/83 (8%)

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC-GMPPHGGI 539
           +DL+     EI  G IR    + ++Q     G+  E ++      Y + +  G  PHGG 
Sbjct: 381 FDLIVPQMGEIIGGSIREDNYDTLIQEMDRRGMKSEDLD-----WYTSLRLNGGAPHGGF 435

Query: 540 AAGIDRIVMLLLGAKNVREVSLF 562
             G++R V  L GA+N+R+   F
Sbjct: 436 GLGLERFVSWLFGAQNIRDAIPF 458


>gi|171686828|ref|XP_001908355.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943375|emb|CAP69028.1| unnamed protein product [Podospora anserina S mat+]
          Length = 573

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 117/292 (40%), Gaps = 38/292 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-------VVANPDSACFEIAKSVRSEW 69
           +G  V++ G +HR+R      FL+I+D YG  Q       +  N D+  F        E 
Sbjct: 142 IGKRVKVFGRIHRIRVQKAATFLEIKDGYGKLQCILPAGDLTRNHDALLFA------QET 195

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA----EELPLPVFGEREYPESIR 125
            L + GL + R  E   A    G+ EL     E++  A    E     V  +++  E+  
Sbjct: 196 ALAVYGL-LKRVPE--GAEAPDGR-ELHVDYFEVVGGAPSDLEAFSNKVSKDQDPWEASM 251

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR D     +  R  I  +         F + S P +  +  EG         
Sbjct: 252 LDNRHLVLRGDNASAVMKLREAIELAFVDSYREMEFTKVSPPAMVQTQVEGGSTLFGFPY 311

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             + ++  L Q+ Q Y + ++ S     + I   FR E   + R   E+  ++ EM F+E
Sbjct: 312 YGEEAY--LTQSSQLYLETVIQS-LGNVYCIEKSFRAEKSLTRRHLSEYTHVEAEMDFIE 368

Query: 246 QDDILNTMENVL-RGVFEEFSNGNTV-------------SNNFLRICYDDAI 283
            DD+L  +E ++ R V +  +N  +              S  F+R+ Y DAI
Sbjct: 369 FDDLLEHIEELICRVVDKVLANPTSAAYLKLLNPGFQKPSRPFMRMRYADAI 420


>gi|220934634|ref|YP_002513533.1| lysyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|259511536|sp|B8GRJ2|SYK_THISH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|219995944|gb|ACL72546.1| lysyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 499

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 108/243 (44%), Gaps = 13/243 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  I D  G  Q+    DS    +     S++     G ++  
Sbjct: 63  VSVAGRMMAKRIMGKASFTQILDMSGRIQLFIQRDS----LPDGAYSDFKTWDVGDILG- 117

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
            AE       TG++ ++   + +L+ +   PLP           R++ R++DL   + + 
Sbjct: 118 -AEGTLFKTKTGELTVNVDSLRLLTKSLR-PLPEKFHGLSDTETRYRQRYVDLIMNEPVR 175

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +    RTR+I  +R  +    F+E  TP++ A  P GA  R F           + L  A
Sbjct: 176 ETFRTRTRVIQFIRQFLDQRGFLEVETPMMQAI-PGGATARPFATHHHALDMQLF-LRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R ++I   FR+E   +   P EF  ++   ++    D+++  E++L
Sbjct: 234 PELYLKRLVVGGFERVYEINRNFRNEGLSTRHNP-EFTMVEFYEAYANYHDLMDLTEDLL 292

Query: 258 RGV 260
           R +
Sbjct: 293 RDL 295



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EIA+G    +  E   + F      KE  ++    F   Y RA + GMPP 
Sbjct: 407 RFEFFVGGREIANGFSELNDYEDQAERFRKQVQEKEAGDDEAMHFDADYLRALEHGMPPT 466

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 467 AGEGIGIDRLVMLLTDSPSIRDVLLFP 493


>gi|33601276|ref|NP_888836.1| lysyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|39932139|sp|Q7WK46|SYK_BORBR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33575711|emb|CAE32789.1| lysyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 506

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 130/310 (41%), Gaps = 40/310 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V+++G +   R  G   F  ++D  G  Q+         E A +   +W    ++ I+G 
Sbjct: 66  VKVAGRMMLKRVMGKASFATLQDGSGRIQIYLE-RGTLGEEAYAAFKQWDIGDIIAIEGP 124

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           V   +          G++ + A    +LS +   PLP        + +R++ R++DL   
Sbjct: 125 VFKTN---------KGELSVHANSARLLSKSLR-PLPDKFHGVADQELRYRQRYVDLIMT 174

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           D   +    R++ +  +R  M+   F+E  TP+L    P GA  + F+          + 
Sbjct: 175 DATRRTFEARSKAVGGIRQTMLNAGFLEVETPMLH-PIPGGAAAKPFVTHHNALDMQMF- 232

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  
Sbjct: 233 LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYADYRWLMDFT 291

Query: 254 ENVLR---------GVFEEFSNGNTVSNNFLRICYDDAIRRY--GTDKPDLRNPIIMHNV 302
           E+++R          V         +S  F R+   +AI +Y  G  +  L +P      
Sbjct: 292 EDLIRQAAIAATGSAVLSYQDRELDLSQPFDRLTICEAILKYAEGYTQAQLDDPA----- 346

Query: 303 TEHFVHSEFR 312
              FV +E R
Sbjct: 347 ---FVRAELR 353



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E   + F     +K+  +     F   Y RA + GMPP 
Sbjct: 414 RFELFITGREIANGFSELNDPEDQAERFRAQVEAKDAGDEEAMYFDADYIRALEYGMPPT 473

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 474 GGCGIGIDRLVMLLTDSPSIRDVILFP 500


>gi|324998062|ref|ZP_08119174.1| lysyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 504

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 114/260 (43%), Gaps = 12/260 (4%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEWVLCIDG 75
            G  V ++G V  VR  G + F  +R+  G   Q + + D    E  +  R + V+ +  
Sbjct: 64  TGEKVAVAGRVIFVRNTGKLCFATLREGDGTELQAMLSLDRVGAE--ELARWKSVVDLGD 121

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-R 134
            V+ R  E I +    G++ + A +  I S +   PLP    +E  E  R + R++DL  
Sbjct: 122 FVLVR-GEVITSR--RGELSVQADEWSIASKSVR-PLPT-AHKELSEENRVRQRYVDLIL 176

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           R    + +  R+ ++ ++R  +   +F+E  TP+L        AR F+  +       Y 
Sbjct: 177 RPQARETVRARSTVLRTVREALTDLDFVEVETPMLQLLHGGATARPFVTHANALGSDLY- 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ + +  +  G +R F++   FR+E   S   P EF  L+   ++   DD+    
Sbjct: 236 LRIAPELFLKRCVVGGIERVFELNRVFRNEGIDSTHSP-EFAMLEAYQAYATYDDMAVLT 294

Query: 254 ENVLRGVFEEFSNGNTVSNN 273
            ++++          TV + 
Sbjct: 295 RDLIQSAARSLFGSTTVRHQ 314



 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP GG+  G+DR++M L G   +RE  LFP+
Sbjct: 463 RAMEYGMPPTGGMGMGVDRLLMTLTGL-GIRETILFPL 499


>gi|189461542|ref|ZP_03010327.1| hypothetical protein BACCOP_02201 [Bacteroides coprocola DSM 17136]
 gi|189431748|gb|EDV00733.1| hypothetical protein BACCOP_02201 [Bacteroides coprocola DSM 17136]
          Length = 467

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 110/277 (39%), Gaps = 36/277 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F  E+ 
Sbjct: 6   RTKIVDLLKCRDFGTMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQVVVDLANFDEELL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEE-LPLPVFGEREY 120
           K + +   + ++G ++         ++ +GQ  E+ A++IE+L   +   PL   G    
Sbjct: 66  KQITTGACISVNGELVE--------SVGSGQAAEIQAREIEVLGTCDNTYPLQKKGH--- 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGAR 178
             S+ F      LR  T     V R R  +  ++        F    TP++TAS  EGA 
Sbjct: 115 --SMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPLITASDCEGAG 172

Query: 179 DFLVPSRVN--------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221
                + +N                 F+    +     QL   L A+     +   P FR
Sbjct: 173 QMFQVTTMNLYDLKKDENGSIIYDNDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            E+  + R   EF+ ++ E++F + +D ++  E  ++
Sbjct: 233 AENSNTPRHLAEFWMIEPEVAFNDINDNMDLAEEFIK 269


>gi|119475157|ref|ZP_01615510.1| asparaginyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119451360|gb|EAW32593.1| asparaginyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 465

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 117/317 (36%), Gaps = 67/317 (21%)

Query: 19  SFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RSEW 69
           S V + GWV   R    GI F+ I D             +CF   ++V        +SE 
Sbjct: 18  SVVTVQGWVRSRRDSKAGISFMAIHD------------GSCFAAIQAVIPTTLDNYQSEV 65

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKY 128
           +    G  +  S   + +       E+ A  +E++  V +    PV  +R   E +R   
Sbjct: 66  LQAGAGCSVRVSGMLVTSEGKGQNFEIQATAVEVVGWVDDPETYPVAKKRHSFEYLR-TI 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +T       R  + NS+       +F   +TPI+TAS  EGA +     RV+ 
Sbjct: 125 AHLRPRTNTFGAVTRVRNVLANSIHNYFFDRDFQWVNTPIITASDCEGAGELF---RVSS 181

Query: 189 GSFYALPQAPQ----------QYKQLLMASG----------FDRYFQIAPCFRDEDPRSD 228
                LP+               +  L  SG            + +   P FR E+  + 
Sbjct: 182 LDLTNLPRGVDGGVDFTKDFFSDESFLTVSGQLNVEAFCMAMSKVYTFGPTFRAENSNTS 241

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN--GNTV---------------- 270
           R   EF+ ++ E++F + +D     E+ L+ +F    N  G+ +                
Sbjct: 242 RHLAEFWMVEPEIAFADLNDDATLAEDFLKYLFNAVLNKCGDDIEFFTQFVDKTCHERLE 301

Query: 271 ---SNNFLRICYDDAIR 284
                NF RI Y +AIR
Sbjct: 302 KVSQQNFERIDYSEAIR 318


>gi|33592239|ref|NP_879883.1| lysyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|39932123|sp|Q7VZ37|SYK_BORPE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33571884|emb|CAE41400.1| lysyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332381656|gb|AEE66503.1| lysyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 506

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 130/310 (41%), Gaps = 40/310 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V+++G +   R  G   F  ++D  G  Q+         E A +   +W    ++ I+G 
Sbjct: 66  VKVAGRMMLKRVMGKASFATLQDGSGRIQIYLE-RGTLGEEAYAAFKQWDIGDIIAIEGP 124

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           V   +          G++ + A    +LS +   PLP        + +R++ R++DL   
Sbjct: 125 VFKTN---------KGELSVHANSARLLSKSLR-PLPDKFHGVADQELRYRQRYVDLIMT 174

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           D   +    R++ +  +R  M+   F+E  TP+L    P GA  + F+          + 
Sbjct: 175 DATRRTFEARSKAVGGIRQAMLNAGFLEVETPMLH-PIPGGAAAKPFVTHHNALDMQMF- 232

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  
Sbjct: 233 LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYADYRWLMDFT 291

Query: 254 ENVLR---------GVFEEFSNGNTVSNNFLRICYDDAIRRY--GTDKPDLRNPIIMHNV 302
           E+++R          V         +S  F R+   +AI +Y  G  +  L +P      
Sbjct: 292 EDLIRQAAIAATGSAVLSYQDRELDLSQPFDRLTICEAILKYAEGYTQAQLDDPA----- 346

Query: 303 TEHFVHSEFR 312
              FV +E R
Sbjct: 347 ---FVRAELR 353



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E   + F     +K+  +     F   Y RA + GMPP 
Sbjct: 414 RFELFITGREIANGFSELNDPEDQAERFRAQVEAKDAGDEEAMYFDADYIRALEYGMPPT 473

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 474 GGCGIGIDRLVMLLTDSPSIRDVILFP 500


>gi|301156337|emb|CBW15808.1| asparaginyl tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 467

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 108/271 (39%), Gaps = 38/271 (14%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE +   
Sbjct: 17  IGEKVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIVNNDIENYE------SEVLRLT 70

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLD 132
            G  +  +   + +      +EL A+K+E+    E+    P+  +R    SI +      
Sbjct: 71  TGCSVIVTGTIVESPAEGQAVELQAEKVEVTGFVEDPDTYPMAAKRH---SIEYLREVAH 127

Query: 133 LRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV+   
Sbjct: 128 LRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RVSTLD 184

Query: 191 FYALPQA-------PQQY---KQLLMASG----------FDRYFQIAPCFRDEDPRSDRL 230
              LP+         Q +   +  L  SG            + +   P FR E+  + R 
Sbjct: 185 LENLPRGEDGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRH 244

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
             EF+ ++ E++F    D     E++L+ VF
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVF 275


>gi|269138594|ref|YP_003295294.1| asparaginyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267984254|gb|ACY84083.1| asparaginyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304558602|gb|ADM41266.1| Asparaginyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 466

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 122/325 (37%), Gaps = 53/325 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           V + V + GWV   R    GI FL + D   +   Q V N     +E       E +   
Sbjct: 16  VDTEVTVRGWVRTRRDSKAGISFLAVYDGSCFNPLQAVVNNSLPNYE------DEVLRLT 69

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132
            G  +  S   + +       EL A  I+++  V +    P+  +R    SI +      
Sbjct: 70  TGCSVEVSGRVVASPGEGQSFELQATAIKVVGWVDDPDTYPMAAKRH---SIEYLREVAH 126

Query: 133 LRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T     V R R  +     R   EN +   STP++TAS  EGA +    S ++  +
Sbjct: 127 LRPRTNLIGAVARVRHTLAQAIHRYFNENGYFWVSTPLITASDTEGAGEMFRVSTLDMEN 186

Query: 191 FYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGE 233
                     Y +        L  SG            + +   P FR E+  + R   E
Sbjct: 187 LPRTDAGKVDYSEDFFGREAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHLAE 246

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVF----EEFSNGNT-----------------VSN 272
           F+ ++ E++F + +DI    E +L+ VF    EE ++                    VS+
Sbjct: 247 FWMVEPEVAFADLNDIAGVAEGMLKYVFNAVLEERADDMAFFAQRVDKDAIDRLQRFVSS 306

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPI 297
           +F ++ Y DAI    T      NP+
Sbjct: 307 DFAQVDYTDAITILETCGKQFENPV 331


>gi|258574089|ref|XP_002541226.1| asparaginyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237901492|gb|EEP75893.1| asparaginyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 734

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 108/249 (43%), Gaps = 13/249 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G +H +R    IIF+ + D YG+ Q V   +      A ++  E  L I G +
Sbjct: 309 GTRVRVLGRIHHLRVQKDIIFVTLYDGYGLLQCVFTGNLIKSYDAMTLTLETSLAIHGEM 368

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLDL 133
            +   +    +      EL A   +++  A    E +   V  + + P+++ +  R L L
Sbjct: 369 RAVPPKQHAPD----NRELHADFFQVIGKAAGDKEAISTRVAPDAD-PQTL-YDNRHLVL 422

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +T    +  R  ++ + R        +E + P +  +  EG           + ++  
Sbjct: 423 RGETASSVMKVRAAVLRAFRAVFEKSRMLEVTPPAMVQTQVEGGATLFSFDYYGEPAY-- 480

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  + S  D  F + P FR E   + R   E+  ++ E+ F+   D+L+ +
Sbjct: 481 LTQSSQLYLETCLPSLGD-VFCVCPSFRAEKSLTRRHLSEYTHIEAELDFITFTDLLDHI 539

Query: 254 ENVLRGVFE 262
           E ++  V +
Sbjct: 540 EAIVCQVID 548


>gi|224093120|ref|XP_002309798.1| predicted protein [Populus trichocarpa]
 gi|222852701|gb|EEE90248.1| predicted protein [Populus trichocarpa]
          Length = 578

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 72/344 (20%), Positives = 132/344 (38%), Gaps = 71/344 (20%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE 68
           D G+  VG  + + GWV  +R    + F+++ D   ++  Q V   ++  ++  +S    
Sbjct: 113 DEGLDRVGKTIVVMGWVRTLRVQSSVTFIEVNDGSCLSNMQCVMGLEAEGYDQVES---- 168

Query: 69  WVLCIDGLVMSRSAETINANIITGQ-----IELSAQKIEILSVAEELPLPVFGEREYPES 123
                 GL+ + ++  +   ++  Q     +EL   KI +L    +   P+  +R   E 
Sbjct: 169 ------GLITTGASILVQGTVVESQGSKQKVELKVNKI-VLVGKSDPSYPIQKKRVSREF 221

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181
           +R K     LR  T     V R R  +     +   EN F+  S+PI+TAS  EGA +  
Sbjct: 222 LRTKAH---LRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCEGAGEQF 278

Query: 182 VPSRVNQGS------------------------FYALPQAPQQYKQL---LMASGFDRYF 214
             + +  GS                        F+  P       QL     A+     +
Sbjct: 279 CVTTLIPGSQEVANSPVDRIPKTKDGLIDWSQDFFGKPAFLTVSGQLNAETYATALSDVY 338

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT----MENVLRGVFE------EF 264
              P FR E+  + R   EF+ ++ E++F +  D +      ++ V++ + E      EF
Sbjct: 339 TFGPTFRAENSNTSRHLAEFWMIEPELAFADLTDDMACATAYLQYVVKHILENCKEDMEF 398

Query: 265 SN-----------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
            N            +    +F+++ Y DA+      K     P+
Sbjct: 399 FNTWIEKGIIDRLTDVAEKDFVQLTYTDAVELLLKAKKKFEFPV 442


>gi|253582830|ref|ZP_04860050.1| asparagine-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251835406|gb|EES63947.1| asparagine-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 463

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 119/308 (38%), Gaps = 59/308 (19%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDG-LV 77
           V +SGW+ ++R      F++I D   +   Q+V +     F+    +     + ++G LV
Sbjct: 21  VEISGWIKKIRVQKNFGFIEINDGSFFKGIQIVFDAKLNNFDEISRLSIISSIRVNGKLV 80

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            S+ A         GQ IE+ A  IEI   A+ L  P+  +R   E +R K   L  R +
Sbjct: 81  KSQGA---------GQDIEIVADSIEIYQKAD-LDYPLQNKRHTFEYLRTKAH-LRPRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T       R+ I  ++        F+   TPI+T S  EGA +     RV       LP+
Sbjct: 130 TFSAVFRVRSVIAYAIHKFFQENGFVYVHTPIITGSDAEGAGEMF---RVTTLDLNDLPK 186

Query: 197 APQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                                  Q       + F   +   P FR E   + R   EF+ 
Sbjct: 187 GEDGKVDSSKDFFGKETNLTVSGQLSGETYCAAFRNIYTFGPTFRAEYSNTARHASEFWM 246

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFL 275
           ++ E++F + +  +   E +++ + +          EF N            N +++ F 
Sbjct: 247 IEPEIAFADLEANMELAEAMVKYIIKYVLEQCPEEMEFFNQFIEKGLFDKLNNVLNSEFG 306

Query: 276 RICYDDAI 283
           R+ Y +AI
Sbjct: 307 RLTYTEAI 314



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G  R    E++    + +G++ E     +G      + G  PH G   
Sbjct: 378 DLLAPGIGEIIGGSQREDNLEILEGRINELGMNIE----DYGFYLDLRKYGSFPHSGYGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +RI+M + G  N+R+V  FP + N
Sbjct: 434 GFERIIMYITGMTNIRDVIPFPRTPN 459


>gi|303310901|ref|XP_003065462.1| Aspartyl-tRNA synthetase, cytoplasmic , putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240105124|gb|EER23317.1| Aspartyl-tRNA synthetase, cytoplasmic , putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320034649|gb|EFW16592.1| aspartyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 562

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 6/84 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI--SKEVVENRFGGLYRAFQCGMPPHGGI 539
           YD    G EI SG  R +++E +  A    G+    E  E+  G    AF+ G  PH G 
Sbjct: 475 YDFFMRGEEIMSGAQRINVAEELEAAMIARGVDPKAEGFEDYLG----AFRQGCAPHAGG 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             G++RIVM  LG  N+R  +LFP
Sbjct: 531 GLGLNRIVMFFLGLPNIRLATLFP 554



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 32/198 (16%)

Query: 94  IELSAQKIEILS-VAEELPLPVF-GEREYPES-----------------IRFKYRFLDLR 134
           +EL   KI +++  A++LP+ V   ER  PES                  R   R LDL+
Sbjct: 181 MELHITKIYMIAQAAQQLPMQVKDAERPPPESNEEGQVDSEGTPIVTLKTRLDNRILDLQ 240

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECS-----TPILTASSPEGARDFLVPSRVNQG 189
            +T      +    I+S   ++ AE  ++       T  L+ ++ EG  D        + 
Sbjct: 241 TET-----SQAITWISSGVAQLFAEFMLKSGARWIFTSKLSGAATEGGADVFELGYFKRK 295

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
           ++  L Q+PQ  KQ+ +A      F+I P FR E+  + R   EF  LD E +F     +
Sbjct: 296 AY--LSQSPQLGKQMCIAGDMMNVFEIGPVFRAEESNTHRHLTEFIGLDFERTFHRHYHE 353

Query: 249 ILNTMENVLRGVFEEFSN 266
           +L+  E +L  +  E   
Sbjct: 354 VLSFAEELLVFILSELKT 371


>gi|166365564|ref|YP_001657837.1| lysyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166087937|dbj|BAG02645.1| lysyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 573

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/249 (21%), Positives = 116/249 (46%), Gaps = 14/249 (5%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           ++ + V ++G +   R  G + F +++D  G  Q+  +      E   +V + +   I  
Sbjct: 63  EISAEVAIAGRIIARRILGKLAFFNLQDETGTIQLYLDKKRIS-ETMAAVPNAFNTVIK- 120

Query: 76  LVMSRSAETINAN-----IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             ++ + + + A         G++ +   + EIL+ +  LPLP           R++ R+
Sbjct: 121 --LTDTGDILGAKGTIKRTERGELSIYVNEYEILTKSL-LPLPDKWHGLTDVEKRYRQRY 177

Query: 131 LDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQ 188
           +DL  +  + +   +R +I  ++R  +  E FIE  TP+L + +    AR F+      +
Sbjct: 178 VDLIVNPEVRQTFRRRAQITAAIRRYLDQEGFIEIETPVLQSEAGGADARPFITYHNTLE 237

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  A + + + L+  GF++ F++   FR+E   +   P EF  +++  ++ +  D
Sbjct: 238 MELY-LRIATELHLKRLIVGGFEKVFELGRIFRNEGVSTKHNP-EFTSIEIYQAYADYYD 295

Query: 249 ILNTMENVL 257
           ++   EN++
Sbjct: 296 MMELTENII 304



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR++MLL  + ++R+V  FP+
Sbjct: 470 ALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIAFPL 506


>gi|119488467|ref|ZP_01621640.1| lysyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119455278|gb|EAW36418.1| lysyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 524

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 9/181 (4%)

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLP--VFGEREYPESIRFKYRFLDLRRDTL 138
           SAE I      G++ +  Q++++LS A  +P P   +G  + PE  R ++R L L     
Sbjct: 124 SAEGIGCRTNRGELSVQVQRLDVLSKAT-IPFPDSYYGVND-PEICR-RHRELGLVSSPE 180

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
                K R+RII SMR  +    F E  TP+L A      AR F+          Y L  
Sbjct: 181 SFATFKLRSRIIKSMRTYLWNAEFDEIETPVLQAIYGGAAARPFITHHNALDIDLY-LRI 239

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + +  +  GF+R F+I   FR+E   S   P EF  ++   ++ +  D++  +E++
Sbjct: 240 ATELFLKRAVCGGFERVFEIGRVFRNEGIDSTHNP-EFTSVEAYQAYADYFDLMTLVEDL 298

Query: 257 L 257
           +
Sbjct: 299 I 299



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A   GMP  GG+  G+DR++MLL   +++R+V +FP
Sbjct: 479 QALSLGMPTCGGMGIGVDRVIMLLTNTQSIRDVIMFP 515


>gi|260906425|ref|ZP_05914747.1| lysyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 519

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 5/155 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP     E  E  R + R+LDL  R+   K ++ R  +++S+R     ++F+E  TP+L
Sbjct: 157 PLPGL-HTELAEDTRVRQRYLDLITREEARKTMLTRAEVMSSLRRTFAGQDFVEIETPML 215

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   AR F           Y L  AP+ + +  +  G +  F+I   FR+E   S 
Sbjct: 216 QFMHGGAAARPFKTHMNAYDIDMY-LRIAPELFLKRAIVGGIENVFEINRNFRNEGADST 274

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
             P EF  L+   S+ +   I +  + +++   +E
Sbjct: 275 HSP-EFAMLEAYQSYGDYHSIADLTKTLVQNAAQE 308



 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF----QCGMPPH 536
           ++DL   GFE+A+G        +  + F          +    GL   F    + GMPP 
Sbjct: 418 KWDLYVRGFELATGYSELVDPVIQRERFEAQAADAAKGDEEAMGLDEEFLTAMEHGMPPT 477

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           GG+  G+DR++M L G   +RE  LFP ++
Sbjct: 478 GGMGMGLDRLLMALTGL-GIRETILFPFTK 506


>gi|312959347|ref|ZP_07773864.1| lysyl-tRNA synthetase, class II [Pseudomonas fluorescens WH6]
 gi|311286064|gb|EFQ64628.1| lysyl-tRNA synthetase, class II [Pseudomonas fluorescens WH6]
          Length = 500

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 20/260 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E   SV++ W +   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLSEETLASVKT-WDM---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTSVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L T      A+ F           + L  AP+ Y + L+  GF++ F+
Sbjct: 194 MQRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRY 286
           V      F+R+   D+I +Y
Sbjct: 312 VFHFGEPFVRLSVFDSILKY 331



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 458 RALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFP 494


>gi|225017738|ref|ZP_03706930.1| hypothetical protein CLOSTMETH_01667 [Clostridium methylpentosum
           DSM 5476]
 gi|224949531|gb|EEG30740.1| hypothetical protein CLOSTMETH_01667 [Clostridium methylpentosum
           DSM 5476]
          Length = 464

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 107/269 (39%), Gaps = 39/269 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ V + GWV  +R    + F+++ D             +CF+  + V  E  L     V
Sbjct: 18  GTSVTVCGWVKTIRDSKALGFIELND------------GSCFKGVQIVFEESNLSNFKEV 65

Query: 78  MSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYP-----ESIRFKYRFL 131
              +  +  A I+TG++ ++    +   + A+E+ L      +YP      S+ F     
Sbjct: 66  TKYNVGS--ALIVTGKLIVTPNARQPFEIHADEIVLEGASTSDYPLQKKRHSLEFLRTIA 123

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGARDFL-------- 181
            LR  T   + V R R   +           F+   TPI+T+S  EGA +          
Sbjct: 124 HLRPRTNTFSAVFRVRSAAAFAIHKFFNERGFVYSHTPIITSSDAEGAGEMFRVTTLDPK 183

Query: 182 VPSRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPG 232
            P     G+      F+  P +     QL    MA  F + +   P FR E   + R   
Sbjct: 184 APPLNEDGTVDFTQDFFEKPTSLTVSGQLEAECMAMAFGKTYTFGPTFRAEKSNTPRHAA 243

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           EF+ ++ E++F +  D ++   ++++ V 
Sbjct: 244 EFWMIEPEIAFADLQDDMDLARDMIKSVL 272


>gi|167765417|ref|ZP_02437530.1| hypothetical protein BACSTE_03805 [Bacteroides stercoris ATCC
           43183]
 gi|167697045|gb|EDS13624.1| hypothetical protein BACSTE_03805 [Bacteroides stercoris ATCC
           43183]
          Length = 467

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 36/277 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F  ++ 
Sbjct: 6   RTKIVDLLKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLANFDEQML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEE-LPLPVFGEREY 120
           K + +   L ++G+        +  ++ +GQ  E+ A++IE+L   +   PL   G    
Sbjct: 66  KEITTGACLSVNGV--------LTESVGSGQTAEIQAREIEVLGTCDNTYPLQKKGH--- 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGAR 178
             S+ F      LR  T     V R R  +  ++      + F    TPI+TAS  EGA 
Sbjct: 115 --SMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHEFFHKKGFFYFHTPIITASDCEGAG 172

Query: 179 DFLVPSRVN--------QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221
                + +N         GS      F+    +     QL   L A+     +   P FR
Sbjct: 173 QMFQVTTMNLYDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            E+  + R   EF+ ++ E++F +  D ++  E  ++
Sbjct: 233 AENSNTPRHLAEFWMVEPEVAFNDITDNMDLAEEFIK 269


>gi|78485071|ref|YP_390996.1| lysyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|78363357|gb|ABB41322.1| lysyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 504

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 109/238 (45%), Gaps = 20/238 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  ++D +G  Q+    D        +   +W L   G ++  
Sbjct: 67  VKVAGRMLLRRIMGKASFATLQDTHGRIQIYVTRDELPEGFYNTQFKKWDL---GDIVGA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----RR 135
                  N  TG++ +  + IE+++ +   PLP        + I+++ R++DL      R
Sbjct: 124 EGYLFKTN--TGELSVHVEHIELITKSLR-PLPDKFHGLQDQEIKYRQRYVDLIVNEESR 180

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           DT     + R++I+  +R  +I + F+E  TP++    P GA  + F           Y 
Sbjct: 181 DTF----MIRSKIVQHVRNFLINKGFMEVETPMMHVI-PGGATAKPFHTHHNALDMPLY- 234

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           L  AP+ Y + L+  GF++ F+I   FR+E   S R   EF  ++   ++ + + +++
Sbjct: 235 LRIAPELYLKRLVVGGFEKVFEINRSFRNEG-LSTRHNPEFTMVEFYSAYTDYNQLMD 291



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G   GIDR+VML      +R+V LFP
Sbjct: 463 ALEHGMPPTAGEGIGIDRLVMLFTDKPTIRDVLLFP 498


>gi|145352203|ref|XP_001420444.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580678|gb|ABO98737.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 607

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 21/262 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           R H   + GV   GS   + G V   R  G + FL + D  G  Q+  +           
Sbjct: 127 REHEGLENGVEIEGSSEAVCGRVMAKRSFGKLAFLSLVDERGSVQLFCDKKRLDETSPGA 186

Query: 59  FE-IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           FE I + V    ++ + G V  RS +        G++ +   K+++L+ A  LPLP    
Sbjct: 187 FEMITELVDVGDIIGVHGSV-KRSDK--------GELSIVPAKVQMLTKAL-LPLPDKWH 236

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPE 175
                  R++ R++DL      +N  K R+ II+++R  +  + F+E  TP+L T +   
Sbjct: 237 GLQDVEKRYRQRYVDLIVSPEVRNTFKARSNIISTIRRMLDDDGFLEMETPVLHTQAGGA 296

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            A+ F        G    L  A + + + L+  GF+R +++   FR+E   +   P EF 
Sbjct: 297 DAKPFNTFHNA-LGMQLTLRIATELHLKRLVVGGFERVYELGRVFRNEGLSTRHNP-EFT 354

Query: 236 QLDMEMSFVEQDDILNTMENVL 257
            +++  ++ +  D+L   E ++
Sbjct: 355 SIEVYQAYADVTDMLELTEEMI 376



 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  G+DR+VMLL  + ++R+V  FP+
Sbjct: 565 ALEYGMPPTAGMGLGVDRLVMLLTNSPSIRDVIAFPL 601


>gi|170723282|ref|YP_001750970.1| lysyl-tRNA synthetase [Pseudomonas putida W619]
 gi|229559861|sp|B1JD39|SYK_PSEPW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|169761285|gb|ACA74601.1| lysyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 500

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 120/261 (45%), Gaps = 22/261 (8%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E   +V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLPEETLAAVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCR 155
              + +L+ +   PLP           R++ R++DL    +T H   V R+++I+ +R  
Sbjct: 135 MTNVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRV-RSQVISHIRKF 192

Query: 156 MIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           +I  +F+E  TP+L T      A+ F         + + L  AP+ Y + L+  GF++ F
Sbjct: 193 LIDRDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMF-LRIAPELYLKRLVVGGFEKVF 251

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGN 268
           +I   FR+E   +   P EF  L+   ++ +  D ++  E + R + +      +   G+
Sbjct: 252 EINRNFRNEGVSTRHNP-EFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGSTDVPYGD 310

Query: 269 TV---SNNFLRICYDDAIRRY 286
            V      F+R+   D+I +Y
Sbjct: 311 KVFHFGEPFVRLSVFDSILKY 331



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 458 RALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFP 494


>gi|289626067|ref|ZP_06459021.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289646234|ref|ZP_06477577.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330867550|gb|EGH02259.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330894560|gb|EGH27221.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
 gi|330985077|gb|EGH83180.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 500

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 20/263 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E    V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLPEETLAEVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTTVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L T      A+ F           + L  AP+ Y + L+  GF++ F+
Sbjct: 194 MKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRYGTD 289
           V      F+R+   D+I +Y  D
Sbjct: 312 VFHFGEPFVRLSVFDSILKYNPD 334



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 408 RFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTDSPSIRDVILFP 494


>gi|328860106|gb|EGG09213.1| hypothetical protein MELLADRAFT_104502 [Melampsora larici-populina
           98AG31]
          Length = 613

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 114/260 (43%), Gaps = 15/260 (5%)

Query: 21  VRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANP----DSACFEIAKSV-RSEWVLCID 74
           + ++G +H +R  G  + F D+       Q++A+     D A FE    + R   ++ + 
Sbjct: 140 ISVAGRIHNMRQAGAKLRFYDLHADGHKIQIMASANDAEDPATFEAVHDIFRRGDIVGVT 199

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----ESIRFKYR 129
           G  M      ++  I   ++ L +  +  L  AE   +   G  E       +  R + R
Sbjct: 200 GFPMRTKKGELS--IGPRKMILLSPNLHQLPRAETSVVTESGTTETKFGFKDQEQRHRKR 257

Query: 130 FLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           +LDL  +   +++ V R RIIN +R  +    F+E  TP++   +        +    + 
Sbjct: 258 YLDLIMNKDVRDVFVTRARIINYVRRFLDDLGFLEVETPMMNMIAGGATAKPFITHHNSL 317

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G    L  AP+ Y + L+  G DR ++I   FR+E       P EF   +  M++ +  D
Sbjct: 318 GLDLFLRIAPELYLKELVVGGLDRVYEIGRVFRNESIDLTHNP-EFSICEFYMAYADMYD 376

Query: 249 ILNTMENVLRGVFEEFSNGN 268
           +++  E ++ G+  + + G+
Sbjct: 377 LMDLTETLISGLVYKITGGS 396



 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 26/39 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + G+PP GG   GIDR+VMLL    +++EV  FP ++
Sbjct: 566 ALEHGLPPTGGWGLGIDRLVMLLTDNNSIKEVLCFPANK 604


>gi|282880920|ref|ZP_06289611.1| lysine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281305143|gb|EFA97212.1| lysine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 578

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 115/253 (45%), Gaps = 20/253 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLV 77
           V ++G +   R  G   F++++D  G  QV    D  C +  K + +   + ++ I   V
Sbjct: 55  VVIAGRMMTRRIMGKASFMELQDSKGRIQVYITRDDICPDDNKDLYNVVFKRLMDIGDFV 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYR 129
                +       TG+I + AQ + +LS A + PLP+        + + E PE +R++ R
Sbjct: 115 ---GIKGFVFKTQTGEISVHAQSLTLLSKALK-PLPIVKYKDGVAYDKFEDPE-LRYRQR 169

Query: 130 FLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL   D +    ++R  ++ +MR  +    + E  TP L + +    AR F       
Sbjct: 170 YVDLVVNDGVKNTFLQRATVLRTMRKVLDDAGYTEVETPTLQSIAGGASARPFTTHFNAL 229

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y +  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ + + + +
Sbjct: 230 NIDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRNHNP-EFTCMELYVQYKDYN 287

Query: 248 DILNTMENVLRGV 260
            ++   E +L  V
Sbjct: 288 WMMEFTEKLLETV 300



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP
Sbjct: 460 RALQYGMPPTSGIGIGIDRLVMLMTGKTFIQEVLLFP 496


>gi|256545395|ref|ZP_05472758.1| asparagine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398956|gb|EEU12570.1| asparagine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 462

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/325 (20%), Positives = 121/325 (37%), Gaps = 51/325 (15%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + GW+ + R    + F+++ D   +   Q+V   +   FE  +       L I G++   
Sbjct: 20  VEGWIRQARFTKNVGFIELNDGTIFKNLQIVVGKELENFEDLQKEHLSASLKIKGIL--- 76

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
               +  N      EL A+ +E+L  ++E   P+  +++  E +R     L  R +T   
Sbjct: 77  ----VKTNNAKQAYELQAKSVEVLGHSDE-KFPIQKQKQSLEYMR-TIPHLRARTNTYRA 130

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
               R+++  ++        FI  + P++TAS  EGA +    +  N             
Sbjct: 131 VFRLRSKLAYALHKFFQERGFIYLNAPLITASDTEGAGEMFQVTTQNLDKLDLNKDGKVD 190

Query: 201 Y-------KQLLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           Y       K  L  SG              +   P FR E+  + R   EF+ ++ E++F
Sbjct: 191 YSKDFFGKKSYLTVSGQLEAEDYALALSNIYTFGPTFRAEESNTPRHAAEFWMIEPEIAF 250

Query: 244 VEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRICYDDA 282
            + +  ++  E++++ +            EF N                  F RI Y +A
Sbjct: 251 ADYNVCMDVAEDMMKYMISFVLENCKDEIEFFNERVDDTLIERLTKVKDAKFARITYTEA 310

Query: 283 IRRYGTDKPDLRNPII--MHNVTEH 305
           I +      D   P+   M   TEH
Sbjct: 311 IEKLQEADVDFEYPVKWGMDLQTEH 335


>gi|68534368|gb|AAH99099.1| Asparaginyl-tRNA synthetase [Rattus norvegicus]
          Length = 404

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 107/281 (38%), Gaps = 41/281 (14%)

Query: 37  IFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAE---------TINA 87
           +FL +RD  G  Q V + D                C +G+V+S  +          T   
Sbjct: 1   MFLVLRDGTGYLQCVLSDD-------------LCQCYNGVVLSTESSVAVYGTLNLTPKG 47

Query: 88  NIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR 147
               G  ELS    E++ +A           E    ++   R + +R + + K +  R+ 
Sbjct: 48  KQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLNNRHMMIRGENMSKILKARSM 107

Query: 148 IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I    R       + E +TP L  +  EG           + +F  L Q+ Q Y +  + 
Sbjct: 108 ITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFGEEAF--LTQSSQLYLETCLP 165

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN--------VLRG 259
           +  D  F IA  +R E  R+ R   EF  ++ E  F+  +D+L+ +E+        VL+ 
Sbjct: 166 ALGD-VFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLSRLEDLVCDVVDRVLKS 224

Query: 260 -----VFEEFSNGNTVSNNFLRICYDDAI---RRYGTDKPD 292
                V++   N       F R+ Y DAI   R +   K D
Sbjct: 225 PVASIVYDLNPNFKAPKRPFRRMNYSDAIEWLREHDVKKED 265



 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 321 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 376

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           +R +  +L   ++R+V L+P
Sbjct: 377 ERFLSWILNRYHIRDVCLYP 396


>gi|300790538|ref|YP_003770829.1| lysyl-tRNA synthetase, class II [Amycolatopsis mediterranei U32]
 gi|299800052|gb|ADJ50427.1| lysyl-tRNA synthetase, class II [Amycolatopsis mediterranei U32]
          Length = 503

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 13/93 (13%)

Query: 479 AFQYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           A ++DL   GFE+A+G          R  ++E  L A      +  + E+      RA +
Sbjct: 411 AEKWDLYVRGFELATGYSELVDPVVERERLTEQSLLAAQGDSEAMRLDED----FLRALE 466

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP GG+  GIDR++M L G   +RE  LFP
Sbjct: 467 YGMPPSGGVGMGIDRLLMALTGL-GIRETILFP 498



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 111/254 (43%), Gaps = 20/254 (7%)

Query: 5   RTHSCG-------DLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS         DL V +  G  V ++G V  +R  G + F  +R+  G T++ A    
Sbjct: 44  RTHSLAEVRAAHADLPVDTATGEQVGVTGRVMFLRNTGKLCFASLREGDG-TELQAMISL 102

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           A  ++ +   + W   +D G  +    E I +    G++ + A    I S A   PLP  
Sbjct: 103 A--KVGEDALAAWKSDVDLGDHVFVQGEVITSK--RGELSVMADAWRITSKALR-PLP-N 156

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASS 173
             +E  E  R + R++DL      +++V+ R  ++ S+R       F E  TP+L T   
Sbjct: 157 AHKELAEETRIRQRYVDLIMRPRARDVVRTRAGVVRSLRESFHRRGFTEVETPMLQTLHG 216

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       + L  AP+ Y +  +  G ++ F+I   FR+E   S   P E
Sbjct: 217 GATARPFVTHSNAFDMELF-LRIAPELYLKRCVVGGIEKVFEINRNFRNEGSDSTHSP-E 274

Query: 234 FYQLDMEMSFVEQD 247
           F  L+   ++   D
Sbjct: 275 FAMLEYYEAYATYD 288


>gi|183598382|ref|ZP_02959875.1| hypothetical protein PROSTU_01775 [Providencia stuartii ATCC 25827]
 gi|188020559|gb|EDU58599.1| hypothetical protein PROSTU_01775 [Providencia stuartii ATCC 25827]
          Length = 466

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 122/327 (37%), Gaps = 57/327 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VGS V + GWV   R  + G  FL + D         NP  A         ++ VL +  
Sbjct: 16  VGSEVTVQGWVRTRRDSNAGFSFLAVYDGSCF-----NPLQAVINNNLPNYNDEVLHLTT 70

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL 133
                    +  +   GQ  EL A  + ++   E+    P+  +R   E +R       L
Sbjct: 71  GCSVEVTGIVKESPGQGQSFELEATAVNVVGWVEDPDTYPMAAKRHSVEYLR---EVAHL 127

Query: 134 RRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T     V R R  +  ++      + +   STPI+TAS  EGA +     RV+   +
Sbjct: 128 RPRTNLIGAVARVRHTLAQALHRFFDEQGYFWVSTPIITASDTEGAGEMF---RVSTLDY 184

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             LP+  +                    Q      A+   + +   P FR E+  + R  
Sbjct: 185 NNLPRNDKGEVDFSEDFFGRESFLTVSGQLNGEAYATALSKVYTFGPTFRAENSNTSRHL 244

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT-----------V 270
            EF+ ++ E++F   DD+    E +L+ VF+          EF                V
Sbjct: 245 AEFWMVEPEVAFASLDDVAGLAEQMLKFVFKAALDERRDDLEFFAQRVDKEVINRLESFV 304

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F ++ Y DAI+   T      NP+
Sbjct: 305 NSDFAQVDYTDAIKILETCGKKFENPV 331


>gi|161524327|ref|YP_001579339.1| lysyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189350917|ref|YP_001946545.1| lysyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|238687033|sp|A9AGV1|SYK_BURM1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|160341756|gb|ABX14842.1| lysyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189334939|dbj|BAG44009.1| class II lysyl-tRNA synthetase [Burkholderia multivorans ATCC
           17616]
          Length = 508

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 123/290 (42%), Gaps = 34/290 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q    P+    E   + + +W L   G +++ 
Sbjct: 68  VAVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPNDVGAETYDAFK-KWDL---GDIVAA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----RR 135
                  N   G++ +   ++ +LS A   PLP        + +R++ R++DL      R
Sbjct: 124 RGVLFRTN--KGELSVKCTELRLLSKALR-PLPDKFHGLSDQEMRYRQRYVDLIVTPETR 180

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           DT       RT+ I S+R  M    F+E  TP+L    P GA  + F+          + 
Sbjct: 181 DTFRA----RTKTIASIRKFMSDAEFMEVETPMLH-PIPGGAAAKPFVTHHNALDMQMF- 234

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           L  AP+ Y + L+  GF+R F+I   FR+E   PR +    EF  ++   ++ +   +++
Sbjct: 235 LRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHN---PEFTMMEFYAAYTDYRWLMD 291

Query: 252 TMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
             E ++R    +     T+         +  F R+    AI++Y     D
Sbjct: 292 FTEQLIRQAAIDALGTATIQYQGRELDLAKPFHRLTITQAIQKYAPQYTD 341



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFITGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMYFDADYIRALEYGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|157129935|ref|XP_001661824.1| aspartyl-tRNA synthetase [Aedes aegypti]
 gi|108872015|gb|EAT36240.1| aspartyl-tRNA synthetase [Aedes aegypti]
          Length = 480

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 119/294 (40%), Gaps = 51/294 (17%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  + + GWV  VR      FL+I D                    S      L +D   
Sbjct: 42  GDQLNVKGWVKSVRKLKEHAFLEIND-------------------GSCNKNLQLVVDKAQ 82

Query: 78  MSRSA--ETINANIITG-----QIELSAQKIEILSVAEELPL----PVFGEREYPESIRF 126
           ++ +A   +++A+   G     Q+EL   K+E L    + PL    P + ++ YP     
Sbjct: 83  LNGAAYGSSVDASGTLGVTPKNQLEL---KVERLQEFGKCPLSEGYPFYPKKSYPPDYVR 139

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLV-PS 184
            +  L  +  +L   +  R          +  E F +  TPI+T++  EGA + FLV P+
Sbjct: 140 NHLHLRPQVSSLASTLRVRHHATKCFNDYLDREGFFQIHTPIITSNDCEGAGEAFLVRPA 199

Query: 185 RVNQGSFYALPQAP--------QQYKQL-------LMASGFDRYFQIAPCFRDEDPRSDR 229
             +     A    P        Q Y  +        M+ G  + +   P FR E+ +S  
Sbjct: 200 SADLLKQMAKKDVPLDRAYFDRQAYLTVSGQLHLEAMSHGLGKVYTFGPTFRAENSKSPI 259

Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
              EFY L++E +F+E  +D+ N +E++++ V +   +  +     +R   DD+
Sbjct: 260 HLSEFYMLELEEAFMETLEDLTNRIESMIKHVTKSLLDVASEDLAAVRKLTDDS 313


>gi|116751160|ref|YP_847847.1| lysyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116700224|gb|ABK19412.1| lysyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 496

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 120/278 (43%), Gaps = 34/278 (12%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +  +R  G  IF+ + D  G  Q+    +    E     +    L I  LV     
Sbjct: 60  VAGRILSLRSFGKSIFMHVLDAGGRVQLYVQQNQVGKETYALTKK---LDIGDLVR---- 112

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES--------IRFKYRFLDL- 133
                  +TG +    +  E+  +  EL L     R  PE         IR++ R++DL 
Sbjct: 113 -------VTGTL-FRTRTNELTLLVRELRLLTKNLRPLPEKYHGLKDVEIRYRQRYVDLI 164

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLV-PSRVNQGS 190
             + + +   KR  I+ ++R  +   +F+E  TP++ A  P GA  + F    + +N   
Sbjct: 165 VNEPVREAFRKRATIVQTVRRFLSERDFLEVETPMMQAV-PGGATAKPFKTFHNALNMEL 223

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  +  AP+ Y + L+  GF+R F++   FR+E   +   P EF  L+   ++   +D++
Sbjct: 224 FLRI--APELYLKRLLVGGFERVFELNRNFRNEGVSTQHNP-EFTMLEFYQAYATYEDLM 280

Query: 251 NTMENVLRGVFEEFSNGNT--VSNNFLRICYDDAIRRY 286
              E +  GV  +  NG +  V+   + I      RRY
Sbjct: 281 QLTEELF-GVLCDAVNGGSRLVTYQDMTIDLKPPWRRY 317



 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VML   + ++R+V LFP
Sbjct: 452 RALEYGMPPAAGEGIGIDRVVMLFTDSPSIRDVILFP 488


>gi|281358632|ref|ZP_06245110.1| lysyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281314862|gb|EFA98897.1| lysyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 505

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 29/36 (80%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VM+L GA+++R+V LFP
Sbjct: 464 ALEHGMPPAGGMGVGIDRLVMILTGAESIRDVILFP 499



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 19/251 (7%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLC 72
           + G  V ++G +   R  G  IF D++D  G  Q+           F I K +    ++ 
Sbjct: 64  EFGPEVVVAGRLMAKRGMGKSIFADLKDSTGKIQLFVGKSEIGEEAFAIFKKLDIGDIVG 123

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFL 131
           I G              +T   EL+ +  E   +++ L PLP           R++ R+L
Sbjct: 124 IKG-----------PTFVTRMGELTIRVHECTLLSKSLRPLPEKYHGLVDIEQRYRQRYL 172

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +     ++K R+RI+  +R  M    F+E  TP+L A +    A  F         
Sbjct: 173 DLITNEESFRVLKLRSRILAEIRNFMNGRGFMEVETPMLQALAGGASANPFTTYYEALSS 232

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           + Y +  AP+ Y + L+  GF++ +++   FR+E       P EF  +++  ++ +   +
Sbjct: 233 TMY-MRIAPELYLKRLLVGGFEKVYELGRNFRNEGMDRRHNP-EFTMMEIYQAYGDCRTM 290

Query: 250 LNTMENVLRGV 260
           +  +E+++  V
Sbjct: 291 MELIESLITTV 301


>gi|171679499|ref|XP_001904696.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939375|emb|CAP64603.1| unnamed protein product [Podospora anserina S mat+]
          Length = 542

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 8/95 (8%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAF----QCGMPP 535
           LV    EIA G +R H  E +L   +  GI    S+   E+  G   + +    + G PP
Sbjct: 447 LVPELCEIAGGSMREHQLEPLLDIMTRQGIIKSPSETASEDDSGNGLQWYADLRRWGCPP 506

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           HGG   G DR++  L G + VR++  FP     CD
Sbjct: 507 HGGFGLGFDRLLSYLSGVQTVRDIVSFPRWYGRCD 541



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 26/208 (12%)

Query: 95  ELSAQKIEILSVAEE----LPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVK-RTRI 148
           EL  +++++L  ++        P+  + + PE +R       LR R  L+  +++ R+  
Sbjct: 137 ELQVREVKVLGSSDAKFALQTFPIQKKYQTPEYLR---TLPHLRPRTPLNALLLRLRSEA 193

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------------QGSFYALP 195
           + S+      ++F++   PI+T+S  EGA +    +  N             Q SF+   
Sbjct: 194 VTSLTQFFARQDFVQTHPPIITSSDCEGAGEVFTLNPANDTAGQPGKESADSQDSFFRSK 253

Query: 196 QAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILN 251
           +      QL    +A      + ++P FR E   + R   EFY L+ EMSFV+  + +++
Sbjct: 254 KYLTVSTQLHLEALAQSVGNVWTLSPVFRAEQSDTSRHLSEFYMLEAEMSFVDDMNSVMD 313

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICY 279
             E+++R +  +    +TV +   R  +
Sbjct: 314 LAEDMMRQLGTDLYQSDTVKSLLTRTPH 341


>gi|56751700|ref|YP_172401.1| lysyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81301224|ref|YP_401432.1| lysyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81561805|sp|Q5N1D9|SYK_SYNP6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123769185|sp|Q31KH4|SYK_SYNE7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|56686659|dbj|BAD79881.1| lysyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81170105|gb|ABB58445.1| lysyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 504

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 117/261 (44%), Gaps = 25/261 (9%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           +V   V ++G +   R  G + F  ++D  G  Q+          + K   SE +  ID 
Sbjct: 48  EVAVEVAIAGRIMARRVFGKLAFFTLQDESGQIQLY---------LEKQRLSESMAAIDA 98

Query: 76  LVMSR-SAETINANII----------TGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
              S   A T   +I+           G++ ++  +  IL+ + + PLP           
Sbjct: 99  EAFSHLKALTDVGDILGVKGSVRRTEKGELSIAVDQYAILTKSLQ-PLPDKWHGLTDVEK 157

Query: 125 RFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLV 182
           R++ R++DL  +  + +   +R +I  ++R  +  + FIE  TP+L A +    AR F+ 
Sbjct: 158 RYRQRYVDLIVNPEVRETFRRRAKITAAIRRHLEDQGFIEIETPVLQAEAGGAEARPFIT 217

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                +   Y L  A + + + L+  GF++ F++   FR+E   +   P EF  +++  +
Sbjct: 218 YHNTLELDLY-LRIATELHLKRLIVGGFEKVFELGRIFRNEGISTRHNP-EFTSIEVYQA 275

Query: 243 FVEQDDILNTMENVLRGVFEE 263
           + + +D++   E ++  V E+
Sbjct: 276 YADYEDMMRLTETLIAQVAEQ 296



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 456 ALEHGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPL 492


>gi|160916179|ref|ZP_02078386.1| hypothetical protein EUBDOL_02206 [Eubacterium dolichum DSM 3991]
 gi|158431903|gb|EDP10192.1| hypothetical protein EUBDOL_02206 [Eubacterium dolichum DSM 3991]
          Length = 495

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 27/40 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG+  GIDR VMLL G   +REV LFP  +N
Sbjct: 453 ALEYGLPPTGGVGIGIDRFVMLLTGQDTIREVLLFPHMKN 492



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 19/264 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACF 59
           R    +C    ++D    V+++G +   R  G   F+ I+D  G  Q+    D      +
Sbjct: 40  RAEYENCSKEELADKAVNVKIAGRIMTKRRQGKAGFMHIQDLDGKIQIYVRKDEIGEEQY 99

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER 118
           EI K      ++ I+G VM             G++ + A+    LS +   LP    G +
Sbjct: 100 EIFKKSDIGDIVGIEGQVMKTDH---------GELSVRAKVYTHLSKSLRPLPEKFHGLQ 150

Query: 119 EYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
           +  E  R++ R++DL  +   K I + R RII +++  +  +  +E  TP+L        
Sbjct: 151 DVEE--RYRRRYVDLIMNPEAKRIALMRPRIIRAIQRYLDGKGLVEVETPVLQPILGGAN 208

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+         FY         K+L++  G +  ++I   FR+E    +  P EF  
Sbjct: 209 ARPFVTHHNTLDMDFYMRIATELPLKRLIVG-GLEGVYEIGRLFRNEGMDKNHNP-EFTT 266

Query: 237 LDMEMSFVEQDDILNTMENVLRGV 260
           ++  +++ + + ++   E ++  V
Sbjct: 267 VEAYVAYSDMEGMMELTEGLMENV 290


>gi|315113190|pdb|2XGT|A Chain A, Asparaginyl-Trna Synthetase From Brugia Malayi Complexed
           With The Sulphamoyl Analogue Of Asparaginyl-Adenylate
 gi|315113191|pdb|2XGT|B Chain B, Asparaginyl-Trna Synthetase From Brugia Malayi Complexed
           With The Sulphamoyl Analogue Of Asparaginyl-Adenylate
          Length = 435

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 107/281 (38%), Gaps = 26/281 (9%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV-- 77
           V + GW+HR+R  G  ++F  +RD  G  QV+          A +V +E  + I G +  
Sbjct: 14  VCIKGWIHRMRRQGKSLMFFILRDGTGFLQVLLMDKLCQTYDALTVNTECTVEIYGAIKE 73

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    E  N +      EL A   +I+  A    +      E         R L +R + 
Sbjct: 74  VPEGKEAPNGH------ELIADFWKIIGNAPPGGIDNVLNEEASVDKMLDNRHLVIRGEN 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R     +MR       ++E + P L  +  EG           + SF  L Q+
Sbjct: 128 AAALLRLRAAATRAMREHFYNAGYVEVAPPTLVQTQVEGGSTLFNLDYFGEQSF--LTQS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  DD++  +E ++
Sbjct: 186 SQLYLETCIPTLGD-VFCIAQSYRAEKSRTRRHLAEYAHVEAECPFITLDDLMEKIEELV 244

Query: 258 RGVFEEFSNGNTVSN--------------NFLRICYDDAIR 284
               +                         FLR+ Y DAI+
Sbjct: 245 CDTVDRLLADEEAKKLLEHINPKFQPPERPFLRMEYKDAIK 285



 Score = 37.0 bits (84), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 13/86 (15%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHG 537
           DL+  G  EI  G +R    + + +AF NV I  +     ++ R   LY     G  PHG
Sbjct: 350 DLLMPGVGEIVGGSMRIWKFDELSKAFKNVEIDPKPYYWYLDQR---LY-----GTCPHG 401

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G++R +  L    ++R+V L+P
Sbjct: 402 GYGLGLERFICWLTNTNHIRDVCLYP 427


>gi|260886922|ref|ZP_05898185.1| lysine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260863351|gb|EEX77851.1| lysine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 308

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 114/267 (42%), Gaps = 22/267 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSF---------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           HRY      D  +++  S          V ++G +  +R HG   F  + D  G  Q+  
Sbjct: 39  HRYEVTRHADELLAEFASLGEEAESETEVSIAGRLMAIRGHGKASFAVLMDLSGKIQIYF 98

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELP 111
             D    E  K  +   +L I  ++  R    +      G++ +      +LS +   LP
Sbjct: 99  KLDVLGEEKYKEFK---LLDIGDIIGVRG---VVFRTRRGELTVRVDDFTLLSKSLRPLP 152

Query: 112 LPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL- 169
               G ++    +R++ R++DL  +  +    + RT+II S+R  +    F+E  TP++ 
Sbjct: 153 EKFHGLKDV--EMRYRQRYVDLIMNPEVKDTFIARTKIIQSIRRYLDERGFLEVETPVMS 210

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
           T +    AR F+          Y L  A +   + L+  G +R ++I   FR+E      
Sbjct: 211 TIAGGAAARPFVTYHNALDMKLY-LRIATELNLKRLIVGGLERVYEIGRIFRNEGIDVRH 269

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENV 256
            P EF  +++  ++ + +D+++  E +
Sbjct: 270 NP-EFTSIEIYQAYADYNDLMDVTEGI 295


>gi|307566317|ref|ZP_07628756.1| lysine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307344894|gb|EFN90292.1| lysine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 577

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G + ++EV LFP
Sbjct: 461 RALQYGMPPTSGIGIGIDRLVMLMTGKEYIQEVLLFP 497



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 132/310 (42%), Gaps = 49/310 (15%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F++++D  G  QV    D  C     E+   V  + +     +
Sbjct: 54  VVIAGRMMGRRIMGKASFIELQDSKGRIQVYITRDDLCPGEDKELYNKVFKKLLDIGDFI 113

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I G V              G+I + A+++ +LS + + PLP+        + + + PE 
Sbjct: 114 GIKGFVFKTQ---------MGEISVHARELSLLSKSLK-PLPIVKYKDGEAYDKFDDPEQ 163

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
            R++ R++DL   D +    +KR  ++ +MR       + E  TP L T +    AR F+
Sbjct: 164 -RYRQRYVDLVVNDNVKDTFLKRATVLRTMRQFFDNAGYTEVETPTLQTIAGGASARPFI 222

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDME 240
                     Y +  A + Y + L+  GF+  ++I   FR+E    DR    EF  +++ 
Sbjct: 223 THFNALNTDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEG--MDRFHNPEFTCMELY 279

Query: 241 MSFVEQDDILNTMENVLRGV------FEEFSNGNTVSN---NFLRICYDDAIRR------ 285
           + + + + ++   E +L  +        E   GN   N    F R+   DAI+       
Sbjct: 280 VQYKDYNWMMTFTEQLLEKICIAVNGKPEVQIGNKTINFKAPFKRLPILDAIKEKTGFDL 339

Query: 286 YGTDKPDLRN 295
           YG ++ ++R+
Sbjct: 340 YGKNEDEIRH 349


>gi|282859169|ref|ZP_06268291.1| lysine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587988|gb|EFB93171.1| lysine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 575

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G + ++EV LFP
Sbjct: 461 RALQYGMPPTSGIGIGIDRLVMLMTGKEYIQEVLLFP 497



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 49/310 (15%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---------L 71
           V ++G +   R  G   F +++D  G  QV    D  C    K + +++          +
Sbjct: 54  VVIAGRMMGRRVMGKASFAELQDSKGRIQVYITRDDICPGEDKDLYNKFFKKLLDIGDFI 113

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPES 123
            I G V              G+I + A++I +LS + + PLPV  +++         PE 
Sbjct: 114 GIKGFVFRTQ---------MGEISVHAKEITLLSKSLK-PLPVVKQKDGETFDSFDDPEQ 163

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
            R++ R++DL   D +    +KR  ++ +MR       + E  TP L T +    AR F+
Sbjct: 164 -RYRQRYVDLVVNDGVKDTFLKRATVLRTMRNFFDEAGYTEVETPTLQTIAGGASARPFI 222

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDME 240
                     Y +  A + Y + L+  GF+  ++I   FR+E    DR    EF  +++ 
Sbjct: 223 THFNALNNDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEG--MDRFHNPEFTCMELY 279

Query: 241 MSFVEQDDILNTMENVLRGV------FEEFSNGNTV---SNNFLRICYDDAIRR------ 285
           + + + + +++  E +L  +        E   G+ V      F R+   DAI+       
Sbjct: 280 VQYKDYNWMMSFTEQLLEKICVAVNGKPEVQMGDKVISFKAPFRRLPILDAIKEKTGFDL 339

Query: 286 YGTDKPDLRN 295
           YG  + ++RN
Sbjct: 340 YGKSEDEIRN 349


>gi|221198423|ref|ZP_03571469.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221208900|ref|ZP_03581897.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221214769|ref|ZP_03587738.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221165308|gb|EED97785.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221171183|gb|EEE03633.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221182355|gb|EEE14756.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 508

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 123/290 (42%), Gaps = 34/290 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q    P+    E   + + +W L   G +++ 
Sbjct: 68  VAVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPNDVGAETYDAFK-KWDL---GDIVAA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----RR 135
                  N   G++ +   ++ +LS A   PLP        + +R++ R++DL      R
Sbjct: 124 RGVLFRTN--KGELSVKCTELRLLSKALR-PLPDKFHGLSDQEMRYRQRYVDLIVTPETR 180

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           DT       RT+ I S+R  M    F+E  TP+L    P GA  + F+          + 
Sbjct: 181 DTFRA----RTKTIASIRKFMSDAEFMEVETPMLH-PIPGGAAAKPFVTHHNALDMQMF- 234

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           L  AP+ Y + L+  GF+R F+I   FR+E   PR +    EF  ++   ++ +   +++
Sbjct: 235 LRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHN---PEFTMMEFYAAYTDYRWLMD 291

Query: 252 TMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
             E ++R    +     T+         +  F R+    AI++Y     D
Sbjct: 292 FTEQLIRQAAIDALGTATIQYQGRELDLAKPFHRLTITQAIQKYAPQYTD 341



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFITGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMYFDADYIRALEYGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|75909357|ref|YP_323653.1| lysyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|123731434|sp|Q3M8C8|SYK_ANAVT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|75703082|gb|ABA22758.1| Lysyl-tRNA synthetase, class-2 [Anabaena variabilis ATCC 29413]
          Length = 561

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/330 (19%), Positives = 138/330 (41%), Gaps = 40/330 (12%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV----------VANPDSACFEIAKSV 65
           +V + V ++G +   R  G + F  + D  G  Q+          +A  D+  F   K +
Sbjct: 50  EVDTEVAIAGRIMARRVFGKLAFFTLEDETGTIQLYLEKNRIQESMAETDADAFNHLKQL 109

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                +      + R+ +        G++ +  ++  IL+ +  LPLP         + R
Sbjct: 110 TDVGDILGAKGTIKRTEK--------GELSIYVKEYTILTKSL-LPLPDKWHGLTDVAKR 160

Query: 126 FKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
           ++ R++DL  +  + +   +R +I   +R  +   +F+E  TP+L + +    AR F+  
Sbjct: 161 YRQRYVDLIVNPEVRQTFRRRAQITAGIRRYLEQRDFLEIETPVLQSETGGADARPFITY 220

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               +   Y L  A + + + L+  GF++ F++   FR+E   +   P EF  +++  ++
Sbjct: 221 HNTLEMELY-LRIATELHLKRLIVGGFEKVFELGRVFRNEGISTRHNP-EFTSIEIYQAY 278

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMH 300
            + +D++   E ++  V ++           L+I Y         +  DL  P   + MH
Sbjct: 279 ADYNDMMALTEGIITTVAQDVLGT-------LQITYQG-------ETVDLTPPWRRVTMH 324

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           ++ + +   +F  F  +       +   IP
Sbjct: 325 DLVKEYTGLDFHSFQTLEEAKSASKNAGIP 354



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 458 ALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPL 494


>gi|218296573|ref|ZP_03497301.1| lysyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243115|gb|EED09647.1| lysyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 492

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 109/243 (44%), Gaps = 15/243 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAKSVRSEWVLCIDGLVMS 79
           V L+G V  +R  G + F  + D  G  Q+    D +  +E+ K +    +L + G + +
Sbjct: 53  VALAGRVVAIRRMGKVTFAHLLDESGRIQLYFQKDLTPRYELLKKLDVGDILGVKGPLFT 112

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                +   +++           ++     LP    G ++  + +R++ R+LDL  +   
Sbjct: 113 TKTGEVTVKVLSW--------TPLVKSLHPLPDKWHGLKD--KEVRYRQRYLDLIVNPEV 162

Query: 140 KNIVKR-TRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQA 197
           + + +R + ++  +R       F+E  TPIL A++    AR F          F+ L  +
Sbjct: 163 REVFRRRSEMVRYIRRFFEDRGFLEVETPILQATTGGAEARPFKTYHNALDHEFF-LRIS 221

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + Y + L+  G+++ F+I   FR+E    +  P EF  L+   ++ +  D+   +E +L
Sbjct: 222 LELYLKRLLVGGYEKVFEIGRVFRNEGIDHNHNP-EFTMLEAYWAYADYQDMALLVEELL 280

Query: 258 RGV 260
            G+
Sbjct: 281 SGL 283



 Score = 43.9 bits (102), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 26/39 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + GMPP  G+  GIDR+ MLL    ++R+V LFP+ +
Sbjct: 443 ALEYGMPPAAGLGLGIDRLAMLLTDQASLRDVLLFPLMK 481


>gi|89257628|gb|ABD65116.1| asparaginyl-tRNA synthetase, putative [Brassica oleracea]
          Length = 705

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 127/327 (38%), Gaps = 69/327 (21%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRS 67
            D G+  VG  + + GWV  +R    + F++I D   ++  Q V NPD+  ++  ++   
Sbjct: 92  ADEGLGRVGQSLSVMGWVRTLRSQSSVTFIEINDGSCLSNLQCVMNPDAEGYDQVEA--- 148

Query: 68  EWVLCIDGLVMSRSAETINANIITGQ-----IELSAQKIEILSVAEELPLPVFGEREYPE 122
                  G V++ ++ ++   I+  Q     +EL   KI IL    +   P+  +R   E
Sbjct: 149 -------GSVLTGASVSVQGTIVASQGTKQKVELKVHKI-ILVGKCDSSYPIQKKRVSRE 200

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARD- 179
            +R K     LR  T     V R R  +     +   E+ F+  ++PI+TAS  EGA + 
Sbjct: 201 FLRTKAH---LRPRTNSFGAVARVRNTLAYATHKFFQESGFVWVASPIITASDCEGAGEQ 257

Query: 180 ----FLVPS-------------RVNQG------SFYALPQAPQQYKQL---LMASGFDRY 213
                L+PS             +   G       F+  P       QL     A+     
Sbjct: 258 FCVTILIPSSHETTDSPIDAIPKTKGGLVDWSQDFFGKPAFLTVSGQLNGETYATALSDI 317

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-------------DDILNTME----NV 256
           +   P FR E+  + R   EF+ L +    +               D+    ME     +
Sbjct: 318 YTFGPTFRAENSNTSRHLAEFWNLLLPTWMMTWPVPPPTSPVKYVLDNCKEDMEFFDTWI 377

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAI 283
            +G+    S  + V   FL++ Y DAI
Sbjct: 378 EKGITHRLS--DVVEKEFLQLSYTDAI 402


>gi|261880136|ref|ZP_06006563.1| lysine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270333191|gb|EFA43977.1| lysine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 320

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G  N++EV  FP
Sbjct: 203 RALQYGMPPTSGIGIGIDRLVMLMTGQPNIQEVMPFP 239


>gi|108761851|ref|YP_630519.1| asparaginyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|123374663|sp|Q1DA04|SYN_MYXXD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|108465731|gb|ABF90916.1| asparaginyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 466

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 113/271 (41%), Gaps = 30/271 (11%)

Query: 18  GSFVRLSGWVHRVR-PHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           G+ V + GWV   R    GI F+++ D   +   QVVA      +E  K +      C  
Sbjct: 17  GTKVEVRGWVRTRRDSKAGISFVNVSDGSTFDPIQVVAPNSLPNYE--KEILHLTAGCS- 73

Query: 75  GLVMSRSAETINANIITGQI-ELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLD 132
             V+SR   T+  +   GQ  E+ A ++++L   ++    P+  ++   E +R     L 
Sbjct: 74  --VISRG--TLVKSQGKGQAYEVQADEVQVLGFVDDPDTYPIQPKQHTLEFLR-DVAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVPS 184
           +R +T       R R   ++      E F   +TPI+TAS  EGA         D + P 
Sbjct: 129 VRTNTFSAVTRVRHRAAQAVHRFFDEEGFFWVNTPIITASDAEGAGQMFRVSTLDAVNPP 188

Query: 185 RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           R + G       F+   A      Q      A    + +   P FR E+  + R   EF+
Sbjct: 189 RTSDGKIDWHKDFFGKEAYLTVSGQLNAEAYALAMSKVYTFGPTFRAENSNTTRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
            ++ E++F + ++  N  E  L+ VF+   N
Sbjct: 249 MIEPEVAFADLNEDANLAERFLKHVFKAVLN 279


>gi|66511652|ref|XP_623490.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like [Apis
           mellifera]
          Length = 556

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 10/250 (4%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-AKSVRSEWVLCIDGLVM 78
           +++ GWVHR+R  G  ++F+ +RD  G  Q V   D+ C    A ++ +E  + + G  +
Sbjct: 136 IKVLGWVHRLRRQGRALMFITLRDGTGFLQCVFT-DTLCQTYDALTLSTEASIEVFG-TL 193

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               E  NA       EL      ++  +           E    ++   R + +R +  
Sbjct: 194 KIVPEGKNA---PDGHELHIDFWRLIGTSPPGGADSILNEEALPDVQLDNRHIMIRGENT 250

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
            + +  R+ +  + R         E + P L  +  EG           + +F  L Q+ 
Sbjct: 251 SRILRLRSVLTQAFRDHFHERGCYEVTPPTLVQTQVEGGSTLFKLDYFGEEAF--LTQSS 308

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           Q Y +  + +  D Y  IA  +R E  R+ R   E+  ++ E +F+  +D+LN +E+++ 
Sbjct: 309 QLYLETCLPAMGDVYC-IAQSYRAEQSRTRRHLAEYTHVEAEYAFITFEDLLNRLEDMVC 367

Query: 259 GVFEEFSNGN 268
            V +   N N
Sbjct: 368 DVVDRVLNSN 377



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R    + +L+ +SN  I  +     +       + G  PHGG   G+
Sbjct: 473 LLPNVGEIIGGSMRIWNYDELLEGYSNANIDPKP----YYWYTDQRKYGTCPHGGFGLGL 528

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           +R +  LL   ++REV L+P
Sbjct: 529 ERFLCWLLNRYHIREVCLYP 548


>gi|237800111|ref|ZP_04588572.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022967|gb|EGI03024.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 500

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 119/263 (45%), Gaps = 20/263 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E    V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLPEETLAEVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTSVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA-LPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L  + P GA      +  N       L  AP+ Y + L+  GF++ F+
Sbjct: 194 MKRDFLEVETPMLQ-TIPGGAAAKPFETHHNALDLEMFLRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRYGTD 289
           V      F+R+   D+I +Y  D
Sbjct: 312 VFHFGEPFVRLSVFDSILKYNPD 334



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 408 RFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTDSPSIRDVILFP 494


>gi|15829242|ref|NP_326602.1| asparaginyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|20139911|sp|Q98PF2|SYN_MYCPU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|14090186|emb|CAC13944.1| ASPARAGINYL-TRNA SYNTHETASE (ASPARAGINE--TRNA LIGASE) (ASNRS)
           [Mycoplasma pulmonis]
          Length = 450

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/259 (20%), Positives = 111/259 (42%), Gaps = 31/259 (11%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           S +++ GWV   R +  I F+++ D            S+   +   ++SE +   D  + 
Sbjct: 18  SKIKIKGWVVTSRGNKKIQFIELND-----------GSSVLHLQLVLKSEKMDLND--IH 64

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
            ++  +I A  I      + Q +E+  + +++ L    + ++P  I+ K   L+  R   
Sbjct: 65  FKTGSSIKAEGILNYTPKAEQSVEL--IVDKISLLAQSDEDFP--IQTKKTTLEFLRTIP 120

Query: 139 H----KNIVKRTRIINSMRCRMIAENFIE-----CSTPILTASSPEGARDFLVPSRVNQG 189
           H     N +K   ++ S     I E F +      + PI+T++  EGA +  +    ++ 
Sbjct: 121 HLRHRSNTIKAVMLVRSSISFFIHEYFQKNDFSLVAAPIITSNDGEGAGETFIVDSEDKE 180

Query: 190 SFY-----ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
            F+     A      Q      A G  + +  AP FR E+  + +   EF+ ++ E++F 
Sbjct: 181 PFFGNNVKATLGVTGQLHAEAYALGLQKVYTFAPTFRAENSNTKKHAAEFWMVEPEVAFF 240

Query: 245 EQDDILNTMENVLRGVFEE 263
              +++   E +L+ V ++
Sbjct: 241 TLKELIQMSEEMLKYVIKK 259


>gi|227873284|ref|ZP_03991549.1| possible lysine--tRNA ligase [Oribacterium sinus F0268]
 gi|227840851|gb|EEJ51216.1| possible lysine--tRNA ligase [Oribacterium sinus F0268]
          Length = 651

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 29/41 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GGI  GIDR+VMLL  A ++R+V LFP  ++ 
Sbjct: 457 AMEIGMPPTGGIGYGIDRLVMLLTDAASIRDVLLFPTMKSL 497



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 128/285 (44%), Gaps = 34/285 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  QV  + +S   E  K  +    L +  +V  R
Sbjct: 63  VVIAGRILSKRVMGKASFMHLQDRDGRIQVYVSRESLGEEEYKKFKK---LDLGDIVEVR 119

Query: 81  SA--ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               ET       G+I +  +KI +LS +   PLP           R++ R++DL  +  
Sbjct: 120 GYVFETQ-----MGEISVHGEKITLLSKSL-YPLPEKFHGLTDTDTRYRQRYVDLIMNED 173

Query: 139 HKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ- 196
            + + +KR++I+  +R  +   +F+E  TP+L  ++   A      +R  +  + AL + 
Sbjct: 174 SRTVFMKRSQILREIRNFLAGRDFLEVETPMLVENAGGAA------ARPFETHYNALNED 227

Query: 197 -----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
                + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++ 
Sbjct: 228 VKLRISLELYLKRLIIGGMERVYEIGRVFRNEGIDTRHNP-EFTLMELYQAYTDYEGMME 286

Query: 252 TMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYG 287
             E++ R + E+      +S         + F R+   +AI+ Y 
Sbjct: 287 LTESMFRYLAEKVCGTLHISYQGTPIDLESPFRRLTMTEAIKEYA 331


>gi|159030332|emb|CAO91227.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 454

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 118/298 (39%), Gaps = 45/298 (15%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVLCIDGLV 77
           V + GWV   R      FL++ D   +   QV+       +E + K++ +   + + G +
Sbjct: 18  VTVQGWVRTKRELKEFTFLEVNDGSSLANLQVILESTLPDYENVLKTISTGTAIAVSGNL 77

Query: 78  MSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +    +  N       IEL A +I +      E PL    +R   E +R     L  R +
Sbjct: 78  VPSPGKGQN-------IELKAAEITLYGDCPPEYPLQ--KKRHSFEFLR-TIAHLRARTN 127

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------QG 189
           TL   +  R     ++      + FI   TPI+TA+  EGA +    + ++         
Sbjct: 128 TLGAVMRVRNACATAIHSFFQEKGFIWVHTPIITANDCEGAGELFTVTSLDLKKTANFAE 187

Query: 190 SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+   A      Q +  +MA      +   P FR E+  + R   EF+ ++ EM+F + 
Sbjct: 188 DFFGKRAYLTVSGQLQAEVMAMALSNVYTFGPTFRAENSNTSRHLAEFWMVEPEMAFCDL 247

Query: 247 DDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRICYDDAI 283
           +   +  E  L+ +F+          +F N            N V++ F RI Y +AI
Sbjct: 248 EGDQDLAEAFLKYIFKFVLENCPEDLQFFNERIDKTVLSTAENIVNSEFGRITYSEAI 305


>gi|125972594|ref|YP_001036504.1| asparaginyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256005156|ref|ZP_05430125.1| asparaginyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281416785|ref|ZP_06247805.1| asparaginyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|166231663|sp|A3DBI2|SYN_CLOTH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|125712819|gb|ABN51311.1| asparaginyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255990903|gb|EEU01016.1| asparaginyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281408187|gb|EFB38445.1| asparaginyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316941168|gb|ADU75202.1| asparaginyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 464

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 130/344 (37%), Gaps = 54/344 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSA--CFEIAKSVRSEWVLC 72
           VG  + ++GWV  VR      F+++ D   +   Q+V    +     EIAK      ++ 
Sbjct: 17  VGKEIVVAGWVRTVRDSKAFGFIELNDGSFFKNLQIVFEEKNLPNFKEIAKLSVGSAIIA 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
              LV +  A+           EL A KIEI   A     P+  +R   E +R     L 
Sbjct: 77  HGELVETPGAKQ--------PFELKATKIEIEG-ASTPDYPLQKKRHSFEYLR-TIAHLR 126

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVPS 184
            R +T       R+ +  ++        F+   TPI+T S  EGA         D   P 
Sbjct: 127 PRTNTFSAVFRVRSLLAYAIHKFFQERGFVYVHTPIITGSDAEGAGQMFKVTTLDINNPP 186

Query: 185 RVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           R   G+      F+          QL     +  F   +   P FR E+  + R   EF+
Sbjct: 187 RKEDGTVDFSKDFFDRETNLTVSGQLEGETYSMAFRNIYTFGPTFRAENSNTARHAAEFW 246

Query: 236 QLDMEMSFVEQDDILNTMENVLRGV-----------FEEFSN----------GNTVSNNF 274
            ++ E++F + +D +   E++L+ +            E F+N           N VS++F
Sbjct: 247 MVEPEIAFADLEDDMELAEDMLKYIINYCLENAPEEMEFFNNFIDNTLLDRLNNIVSSDF 306

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHN--VTEHFVHSEFRVFSK 316
             + Y +AI            P+   N   TEH  +   +VF K
Sbjct: 307 AHVTYTEAIDILSKADQKFEYPVKWGNDLQTEHERYLTEKVFKK 350


>gi|315113222|pdb|2XTI|A Chain A, Asparaginyl-Trna Synthetase From Brugia Malayi Complexed
           With Atp:mg And L-Asp-Beta-Noh Adenylate:ppi:mg
 gi|315113223|pdb|2XTI|B Chain B, Asparaginyl-Trna Synthetase From Brugia Malayi Complexed
           With Atp:mg And L-Asp-Beta-Noh Adenylate:ppi:mg
          Length = 437

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 107/281 (38%), Gaps = 26/281 (9%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV-- 77
           V + GW+HR+R  G  ++F  +RD  G  QV+          A +V +E  + I G +  
Sbjct: 16  VCIKGWIHRMRRQGKSLMFFILRDGTGFLQVLLMDKLCQTYDALTVNTECTVEIYGAIKE 75

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    E  N +      EL A   +I+  A    +      E         R L +R + 
Sbjct: 76  VPEGKEAPNGH------ELIADFWKIIGNAPPGGIDNVLNEEASVDKMLDNRHLVIRGEN 129

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R     +MR       ++E + P L  +  EG           + SF  L Q+
Sbjct: 130 AAALLRLRAAATRAMREHFYNAGYVEVAPPTLVQTQVEGGSTLFNLDYFGEQSF--LTQS 187

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  DD++  +E ++
Sbjct: 188 SQLYLETCIPTLGD-VFCIAQSYRAEKSRTRRHLAEYAHVEAECPFITLDDLMEKIEELV 246

Query: 258 RGVFEEFSNGNTVSN--------------NFLRICYDDAIR 284
               +                         FLR+ Y DAI+
Sbjct: 247 CDTVDRLLADEEAKKLLEHINPKFQPPERPFLRMEYKDAIK 287


>gi|157875933|ref|XP_001686332.1| asparaginyl-trna synthetase [Leishmania major strain Friedlin]
 gi|68129406|emb|CAJ07947.1| putative asparaginyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 890

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 106/266 (39%), Gaps = 27/266 (10%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G+L     G+ V + GW HRVR    + F+ +RD  G  Q V +  +  F     V    
Sbjct: 451 GELLSHKEGACVYVVGWAHRVRHQSRMSFVVLRDGTGFIQCVFDGSTEPFHRESCVAIRG 510

Query: 70  VLCIDGLVMSRSAETINANI----ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            L  +    S     +  ++    + G    S   IE +  AE     ++ +R       
Sbjct: 511 TLRHEPKAKSELQPPMELHVDEYAVVGD---SDGTIETVITAESSVDKLYDQRHV----- 562

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                  + R TL  +++K R  ++   R    + ++ E + P L  +  EG        
Sbjct: 563 -------VVRGTLASSVLKVRHELLRVFREHFWSRHYYEVTPPTLVQTQVEGGSTLF--E 613

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
            +  G    L Q+ Q Y + + AS  + Y  + P +R E  ++ R   EF  L+ E    
Sbjct: 614 VLYYGETAYLTQSSQLYLESVTASLGNVYCCV-PSYRAERSKTKRHLSEFTHLEAEYDVC 672

Query: 245 EQDDILNTMEN----VLRGVFEEFSN 266
             +D+LN +E+    V+R V E   +
Sbjct: 673 SFEDLLNHLEDMFCTVIRTVIERVGD 698



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 15/93 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVV-----ENRFGGLYRAFQCGMPPH 536
           D++  G  E+  G +R +  + +L A+   G+          + R+GG          PH
Sbjct: 805 DVLAPGIGEVLGGSMRMYKYDELLDAYKREGLDASTYYWYTDQRRYGGA---------PH 855

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           GG   G++R+++ +L   +V++  L+P     C
Sbjct: 856 GGFGLGVERLLVWMLNLDSVKDACLYPRYMGRC 888


>gi|238919270|ref|YP_002932785.1| asparaginyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|238868839|gb|ACR68550.1| asparaginyl-tRNA synthetase, putative [Edwardsiella ictaluri
           93-146]
          Length = 466

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 123/325 (37%), Gaps = 53/325 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           V + V + GWV   R    GI FL + D   +   Q V N     +E      SE +   
Sbjct: 16  VDTEVTVRGWVRTRRDSKAGISFLAVYDGSCFNPLQAVVNNSLPNYE------SEVLRLT 69

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132
            G  +  S   + +       EL A  I+++  V +    P+  +R    SI +      
Sbjct: 70  TGCSLEVSGRVVASPGEGQSFELQATAIKVVGWVDDPDTYPMAAKRH---SIEYLREVAH 126

Query: 133 LRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T     V R R  +     R   EN +   STP++TAS  EGA +    S ++  +
Sbjct: 127 LRPRTNLIGAVARVRHTLAQAIHRYFNENGYFWVSTPLITASDTEGAGEMFRVSTLDMEN 186

Query: 191 FYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGE 233
                     Y +        L  SG            + +   P FR E+  + R   E
Sbjct: 187 LPRNDAGKVDYSEDFFGREAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHLAE 246

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVF----EEFSNGNT-----------------VSN 272
           F+ ++ E++F + +DI    E +L+ VF    EE ++                    VS+
Sbjct: 247 FWMVEPEVAFADLNDIAGVAEGMLKYVFNAVLEERADDMAFFAQRVDKDAIDRLQRFVSS 306

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPI 297
           +F ++ Y DAI    +      NP+
Sbjct: 307 DFAQVDYTDAITILESCGKQFENPV 331


>gi|206889994|ref|YP_002249051.1| lysyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741932|gb|ACI20989.1| lysyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 494

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/281 (22%), Positives = 120/281 (42%), Gaps = 25/281 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVM 78
           + ++G V  +R  G   F  ++D  G  Q+    D     F + K++    ++ ++G + 
Sbjct: 60  ISVAGRVILLRDFGKAAFAHVQDSKGKIQIYLRKDILGEKFSLIKNLDIGDIVGVEGRLF 119

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-T 137
                       T ++ +       LS +   PLP           R++ R++DL  + +
Sbjct: 120 RTK---------TNELTIEVHNFVFLSKSLR-PLPEKWHGLKDIEARYRQRYVDLIVNPS 169

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
           + +  VKR  II  +R  +  E F+E  TP++ T +    A+ F           Y L  
Sbjct: 170 VKETFVKRQLIIKYLREFLENEGFLEVETPMMHTIAGGARAKPFKTYHEALDMELY-LRI 228

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++  +++ + + +++  E +
Sbjct: 229 APELYLKRLLVGGFERVFEIGKNFRNEGISTKHNP-EFTMIEFYVAYKDYNWLMDFTEKL 287

Query: 257 LRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGT 288
           L  + ++      V         +  F RI   DA++  G 
Sbjct: 288 LSYITQKVCGSLQVKYGDYIIDFTPPFKRITMFDALKNKGV 328



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VM+L   +++R+V LFP+
Sbjct: 451 RALEIGMPPAAGEGIGIDRLVMILTNNQSIRDVILFPL 488


>gi|261344270|ref|ZP_05971914.1| asparagine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282567872|gb|EFB73407.1| asparagine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 466

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/330 (21%), Positives = 124/330 (37%), Gaps = 63/330 (19%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG+ V + GWV R R          RD       +A  D +CF   +++ +  +   +  
Sbjct: 16  VGTEVTVQGWV-RTR----------RDSKAGFSFLAVYDGSCFNPLQAIINNNLPNYNDE 64

Query: 77  VMSRSAE-TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----ESIRFKYRF 130
           V+  +   ++    +  + +   Q  E+ + A ++   V     YP      S+ F    
Sbjct: 65  VLHLTTGCSVEVTGVVAESQGQGQSFELQATAIKVVGWVEDPDTYPMAPKRHSVEFLREA 124

Query: 131 LDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             LR  T     V R R  +  ++      + F   STP++TAS  EGA +     RV+ 
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF---RVST 181

Query: 189 GSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
             +  LP+  +                    Q      A+   + +   P FR E+  + 
Sbjct: 182 LDYNNLPRTDKGEVDFSQDFFGREAFLTVSGQLNGEAYATALSKVYTFGPTFRAENSNTS 241

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT--------- 269
           R   EF+ L+ E++F   DDI    E +L+  F+          EF              
Sbjct: 242 RHLAEFWMLEPEVAFANLDDIAGLAEKMLKYAFKAALTERRDDLEFFAERVDKDVIDRLE 301

Query: 270 --VSNNFLRICYDDAIRRYGTDKPDLRNPI 297
             V+++F ++ Y DA++   T      NP+
Sbjct: 302 RFVNSDFAQVDYTDAVKILETCGQKFENPV 331


>gi|254251974|ref|ZP_04945292.1| Lysyl-tRNA synthetase (class II) [Burkholderia dolosa AUO158]
 gi|124894583|gb|EAY68463.1| Lysyl-tRNA synthetase (class II) [Burkholderia dolosa AUO158]
          Length = 508

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 132/316 (41%), Gaps = 46/316 (14%)

Query: 6   THSCGDLGV----SDVGSF------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL      SD  +       V ++G +   R  G   F  ++D  G  Q    P+
Sbjct: 43  THHAADLQAKFAESDKAALEADPVEVAVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPN 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPV 114
               +   + + +W L    +V +R          T + ELS Q  E+  +++ L PLP 
Sbjct: 103 DVGADTYDAFK-KWDLG--DIVAAR-----GVLFRTNKGELSVQCKELRLLSKSLRPLPD 154

Query: 115 FGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                  + +R++ R++DL      RDT       RT+ I S+R  M   +F+E  TP+L
Sbjct: 155 KFHGLADQEMRYRQRYVDLIVTPETRDTFRA----RTKTIASIRKFMSDADFMEVETPML 210

Query: 170 TASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DP 225
               P GA  + F+          + L  AP+ Y + L+  GF+R F+I   FR+E   P
Sbjct: 211 H-PIPGGAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGVSP 268

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLR 276
           R +    EF  ++   ++ +   +++  E ++R    +     T+         +  F R
Sbjct: 269 RHN---PEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAQPFHR 325

Query: 277 ICYDDAIRRYGTDKPD 292
           +    AI++Y     D
Sbjct: 326 LTITQAIQKYAPQYTD 341



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFITGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|313902254|ref|ZP_07835660.1| lysyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467484|gb|EFR62992.1| lysyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 552

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 31/280 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-------NPDSACFEIAKSVRSEWV 70
           G  VR++G +  +R HG   F D++D  G  Q++A       +  SA  E+    R +WV
Sbjct: 114 GHPVRVAGRLMALRRHGRAAFADLQDASGRIQLLARVGPLAEDTYSAFLELD---RGDWV 170

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
                ++ +R  E   +  +TG + L              PLP          +R++ R+
Sbjct: 171 GAEGTVIRTRRGEI--SVEVTGFVLLGKSL---------YPLPEKWHGLQNVDLRYRQRY 219

Query: 131 LDLRRDTLHKNIVK----RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSR 185
           +DL    ++  +++    R+RII  +R  +    F E  TP+L        AR F+    
Sbjct: 220 VDL---IVNPQVLETFRLRSRIIREIRAFLDQRGFYEVETPVLHLIYGGAAARPFVTHHN 276

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  A + + + L+  G +R ++I   FR+E   +   P EF  L++  +F +
Sbjct: 277 ALDLDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGISTRHNP-EFTMLELYQAFSD 334

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            + ++   E ++  V +       V      I +    RR
Sbjct: 335 YEGMMELTEQLVSHVAQAVHGSPVVHYQGQAIDFTPPWRR 374



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G+P  GG+  GIDR+VMLL    ++R+V LFP+
Sbjct: 511 ALEIGLPATGGLGIGIDRLVMLLTDNPSIRDVILFPL 547


>gi|46198987|ref|YP_004654.1| lysyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55981010|ref|YP_144307.1| lysyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|730872|sp|P41255|SYK_THETH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81364188|sp|Q5SJG7|SYK_THET8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81405966|sp|Q72JT9|SYK_THET2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1072959|pir||A55589 lysine-tRNA ligase (EC 6.1.1.6) - Thermus aquaticus
 gi|486665|emb|CAA50039.1| lysine--tRNA ligase [Thermus thermophilus]
 gi|46196611|gb|AAS81027.1| lysyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55772423|dbj|BAD70864.1| lysyl-tRNA synthetase (lysine--tRNA ligase) (LysRS) [Thermus
           thermophilus HB8]
          Length = 492

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 118/276 (42%), Gaps = 24/276 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G +  +R  G + F  + D  G  Q+    D +  +E+ K +    +L + G   +
Sbjct: 54  VAVAGRLVALRRMGKVTFAHLLDETGRIQLYFQRDLTPKYELLKKLDVGDILGVRGHPFT 113

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                +   ++            ++     LP    G R+  + +R++ R+LDL  +   
Sbjct: 114 TKTGEVTVKVLDW--------TPLVKSLHPLPDKWHGLRD--KEVRYRQRYLDLIVNPEV 163

Query: 140 KNIVKR-TRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQA 197
           + + +R + I+  +R    A+ F+E  TPIL  ++    AR F          FY L  +
Sbjct: 164 REVFRRRSEIVRYIRRFFEAKGFLEVETPILQPTTGGAEARPFKTYHNALDHEFY-LRIS 222

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + Y + L+  G+++ F+I   FR+E    +  P EF  L+   ++ +  D+   +E +L
Sbjct: 223 LELYLKRLLVGGYEKVFEIGRNFRNEGIDHNHNP-EFTMLEAYWAYADYQDMAGLVEELL 281

Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
            G+       + V            F RI + +A++
Sbjct: 282 SGLVLHLFGSHEVPYQGRVLNFKPPFRRISFVEALK 317



 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 25/37 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  GIDR+ MLL    ++R+V LFP+
Sbjct: 444 ALEYGMPPAAGLGLGIDRLAMLLTDQPSLRDVLLFPL 480


>gi|330964103|gb|EGH64363.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 500

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 118/260 (45%), Gaps = 20/260 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E    V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLPEETLAEVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+R+I  +R  +
Sbjct: 135 MTSVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSRVIAHIRSFL 193

Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA-LPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L  + P GA      +  N       L  AP+ Y + L+  GF++ F+
Sbjct: 194 MQRDFLEVETPMLQ-TIPGGAAAKPFETHHNALDLEMFLRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRY 286
           V      F+R+   D+I +Y
Sbjct: 312 VFHFGEPFVRLSVFDSILKY 331



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 408 RFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTDSPSIRDVILFP 494


>gi|224370199|ref|YP_002604363.1| LysS2 [Desulfobacterium autotrophicum HRM2]
 gi|223692916|gb|ACN16199.1| LysS2 [Desulfobacterium autotrophicum HRM2]
          Length = 299

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 23/159 (14%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
            +  R RI+ +MR     ++F+E  TPI + A +PE   D    S  + G F  L  +P+
Sbjct: 5   RLAGRARIVQAMRSYFYDQDFLEVETPIRIPAPAPEAHID----SFESDGWF--LQSSPE 58

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN---- 255
              + L+A G +R FQI  CFR    R +R P    +L M   + +    L  M+     
Sbjct: 59  LAMKRLLARGHNRIFQICKCFR----RDERGPRHLTELTMLEWYTKGYTYLELMDQCTAL 114

Query: 256 -----VLRGVFEEFS-NGNTV--SNNFLRICYDDAIRRY 286
                V  G  +  S NG T+  ++ +  I  D A RRY
Sbjct: 115 VRHIAVQTGCKDRLSYNGQTIDLASPWEVITVDTAFRRY 153


>gi|156843229|ref|XP_001644683.1| hypothetical protein Kpol_1056p26 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115331|gb|EDO16825.1| hypothetical protein Kpol_1056p26 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 483

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 107/256 (41%), Gaps = 39/256 (15%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           ++GW+  VR    + F+DI+D   + ++ +  P    F+   ++ SE    +  L   +S
Sbjct: 32  INGWIKSVRLLKKVAFIDIQDGTILKELKIVVP----FDSQSNLSSEVATFLKSLRTGQS 87

Query: 82  AETINANIITGQIELSAQKIE------------ILSVAEELPLPVFGEREYPESIRFKYR 129
               +A ++  + E   Q+ E            I +V+E  PL    +++Y  S+ +   
Sbjct: 88  IAIKDAKLV--ETEGREQRFELNITDPIDNISIIGNVSESYPL----QKKY-HSLPYLRT 140

Query: 130 FLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
              L+  T +   + R R  +  +M        F + S PILT S  EGA +     RV 
Sbjct: 141 LPTLKHRTSYLGSLLRFRSELEYNMATFFKLNQFTKASPPILTGSDCEGAGELF---RVE 197

Query: 188 QGSFYALPQ----------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
              +    Q             Q +  ++A  F R + ++PCFR E+  ++R   EF+ +
Sbjct: 198 ANGYVEKKQHYFGKPTYLTVSLQLQLEILAMAFSRAWSLSPCFRAEESDTNRHLSEFWMM 257

Query: 238 DMEMSFVEQDDILNTM 253
           + E  F +    L T 
Sbjct: 258 EAEWCFTKDTKELTTF 273


>gi|32267165|ref|NP_861197.1| lysyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|39932098|sp|Q7VFL0|SYK_HELHP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|32263218|gb|AAP78263.1| lysyl-tRNA synthetases [Helicobacter hepaticus ATCC 51449]
          Length = 518

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 118/261 (45%), Gaps = 19/261 (7%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---IAKSVRSEWVLCIDGLVMSRS 81
           G V  +R  G   F+ I+D  GI Q   + +    +   I K +    ++ + G      
Sbjct: 67  GRVRFIRLMGKACFIKIQDESGILQAYVSKNDIGEDFLLIKKVLEVGDIINVSGYAFVTK 126

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                    TG++ +    ++IL+ +  +PLP          +R++ R++DL  +   K 
Sbjct: 127 ---------TGELSIHTLTLQILTKSI-VPLPEKFHGLNDIELRYRQRYVDLIVNNKVKE 176

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
             K R++I++ +R     + F+E  TP+L  S P GA  R F+          Y L  AP
Sbjct: 177 TFKLRSQIVSCIRQFFEQKGFLEVETPML-HSIPGGANARPFITHHNALDVDRY-LRIAP 234

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+  F++   FR+E       P EF  ++   ++   +D++   + +  
Sbjct: 235 ELYLKRLIVGGFEAIFELNRNFRNEGMDHSHNP-EFSMIEFYWAYKTYEDLITLTQELFA 293

Query: 259 GVFEEFSNGNTVSNNFLRICY 279
            +F++ +  +++ ++ L I +
Sbjct: 294 FLFKKLNLPHSLIHDELEIDF 314



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 5/63 (7%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF----PMSQNFCDLLMGSPSTVSVEQ 583
           A   GMPP  G   GIDR+VMLL  AK +++V LF    P   NF D+++   +  + + 
Sbjct: 456 ALAHGMPPTAGEGIGIDRLVMLLSNAKTIKDVILFPALKPTKSNF-DIILSQDALSNAQI 514

Query: 584 LRE 586
           ++E
Sbjct: 515 IKE 517


>gi|229818183|ref|ZP_04448465.1| hypothetical protein BIFANG_03478 [Bifidobacterium angulatum DSM
           20098]
 gi|229784434|gb|EEP20548.1| hypothetical protein BIFANG_03478 [Bifidobacterium angulatum DSM
           20098]
          Length = 557

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 108/264 (40%), Gaps = 33/264 (12%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I + A + PLP    +E  E  R +  ++ +  D   +N+V+ R++ +
Sbjct: 180 TGELSVFATEWAIAAKALQ-PLPAL-HKELNEDTRTRKPYIGMIADEKIRNMVRNRSKAV 237

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R      +F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 238 ASLRKTFADHDFLEVETPMLQTVHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 296

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           G DR F+I   FR+E   +   P        E + VE               ++ + N +
Sbjct: 297 GIDRVFEINRDFRNEGVDATHAP--------EFTMVE--------------AYQAYGNYD 334

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           T+     ++  D A+  +G+ K      + + + TE+    E++  S   S++       
Sbjct: 335 TIGALVKQLVQDTAMDVFGSHK------VTLLDGTEYDFGGEWKTISMYDSLSEALGEEI 388

Query: 329 IPAKGGGGNRAFCDRMNEWARSQG 352
           +P  G        + + E A   G
Sbjct: 389 VPNGGPDSPGTSVEHLGEIADKLG 412



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 466 KWDLYVRGFELATG--YSELNDPVVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 523

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 524 PAGGMGMGIDRLLIALTGA-TIRETITFPL 552


>gi|145596786|ref|YP_001161083.1| lysyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145306123|gb|ABP56705.1| lysyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 502

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 102/237 (43%), Gaps = 14/237 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEWVLCID- 74
            G  V ++G V  +R  G + F  +RD  G   Q + + D     +      +W   +D 
Sbjct: 63  TGDQVSVTGRVIFMRNTGKLCFATLRDGDGTELQAMLSLD----RVGAQRLEDWKRLVDL 118

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G ++  + E I +    G++ + AQ   + + A   PLPV   +   E  R + R++DL 
Sbjct: 119 GDLVGVTGEVITSR--RGELSVLAQGWAVTAKALR-PLPV-AHKPLSEEARVRQRYVDLI 174

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            R    + +  R   + S+R  +    F+E  TP+L        AR F+  S       Y
Sbjct: 175 VRPQARQMVRTRATAVRSLRESLHERGFLEVETPMLQLLHGGATARPFVTHSNALSTDLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            L  AP+ + +  +  G D  F+I   FR+E   S   P EF  L+   ++ + D I
Sbjct: 235 -LRIAPELFLKRALVGGVDHVFEINRNFRNEGVDSSHSP-EFAMLEAYQAYGDYDTI 289



 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL------YRAFQCGMP 534
           ++DL   GFE+ +G   + + + ++Q    V  ++         +       RA + GMP
Sbjct: 412 KWDLYVLGFELGTG--YSELVDPVVQRERLVAQARLAARGDDEAMRLDEDFLRALEYGMP 469

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR++M L G   +RE  LFP+
Sbjct: 470 PSGGMGMGIDRLLMALTGL-GIRETILFPL 498


>gi|315426530|dbj|BAJ48161.1| aspartyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 108

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL+    E+ASGG R    +V+ +     G++  + E+      + F  GMP H G   
Sbjct: 23  FDLMYQWLELASGGTRVSDHDVLERKLREKGLNPAMFEDHL----KVFSYGMPVHAGWGL 78

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R +M+L    N+RE  LFP
Sbjct: 79  GFERFLMVLTRRTNIRETVLFP 100


>gi|303238055|ref|ZP_07324596.1| lysine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302481751|gb|EFL44805.1| lysine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 576

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G + ++EV LFP
Sbjct: 461 RALQYGMPPTSGIGIGIDRLVMLMTGQEYIQEVLLFP 497



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 19/216 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +I+D  G  QV    D  C    K +   + +    L+   
Sbjct: 54  VVIAGRLMGRRVMGKASFAEIQDSKGRIQVYITRDDLCPGENKDI---YNVLFKKLLDIG 110

Query: 81  SAETINANIIT---GQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYR 129
               I   +     G+I + AQ++ +LS + + PLP+        + + + PE +R++ R
Sbjct: 111 DFVGIKGYVFKTQMGEISVHAQELTLLSKSLK-PLPIVKYKDGVAYDKFDDPE-LRYRQR 168

Query: 130 FLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187
           ++DL   + + +   KR  ++ +MR       + E  TP L T +    AR F+      
Sbjct: 169 YVDLVVNEGVKETFQKRATVLRTMRNFFDEAGYTEVETPTLQTIAGGASARPFITHFNAL 228

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
               Y +  A + Y + L+  GF+  ++I   FR+E
Sbjct: 229 NTEMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNE 263


>gi|288554692|ref|YP_003426627.1| lysyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288545852|gb|ADC49735.1| lysyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 499

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 116/266 (43%), Gaps = 23/266 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + + G  V L+G +   R  G   F  I+D  G  Q+    D+   E     + +    I
Sbjct: 54  LEEQGHEVTLAGRIMTKRGKGKAGFAHIQDLSGQVQIYVRKDAVGEE-----QYDLFTSI 108

Query: 74  D-GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFL 131
           D G ++  +       +  G++ +     +ILS +   LP    G ++  +  R++ R++
Sbjct: 109 DIGDIVGVTGTAFKTKV--GELSVKVTDFQILSKSLRPLPDKFHGLKDIEQ--RYRQRYV 164

Query: 132 DL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSR 185
           DL      RDT     V R++I+ SMR  +    F+E  TP + + +    AR F+    
Sbjct: 165 DLIMNPEVRDTF----VLRSKILQSMRRYLDNRGFLEVETPTMHSIAGGASARPFVTHHN 220

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 221 ALDMTLY-MRIAIELHLKRLIVGGMEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYAD 278

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS 271
             DI+   E ++  +  E      V+
Sbjct: 279 YQDIMELTEELVAHIAREVLGTTKVT 304



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + + GMPP GG+  GIDR+VMLL  + ++R+V LFP  +N
Sbjct: 455 SLEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPQMRN 494


>gi|262373049|ref|ZP_06066328.1| lysyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262313074|gb|EEY94159.1| lysyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 523

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 110/241 (45%), Gaps = 17/241 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           +V+++G V   R      F+ I+D  G  Q+  +      +I ++++S   L +  ++  
Sbjct: 89  YVKVAGRVMLNRGS----FMVIQDMTGRIQLYVDRKGLAADILETIKS---LDLGDII-- 139

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138
            +AE        G + +  +  E+L+ +   PLP           +++ R+LDL   +  
Sbjct: 140 -AAEGYIGRSGKGDLYVHLEGFELLTKSLR-PLPDKFHGLTDTEAKYRKRYLDLIVNEET 197

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQ 196
            K    R +++  +R  +  E F+E  TP++    P GA  + F+          Y L  
Sbjct: 198 RKTFEIRAKVVAGIRAFLTNERFMEVETPMMHVI-PGGASAKPFVTHHNALDMELY-LRI 255

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   ++ +  D++   EN+
Sbjct: 256 APELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEFYQAYADYKDLMALTENM 314

Query: 257 L 257
           L
Sbjct: 315 L 315



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 482 ALEYGLPPTAGEGIGIDRLVMLFANAPSIRDVLLFP 517


>gi|50121465|ref|YP_050632.1| asparaginyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|59798526|sp|Q6D453|SYN_ERWCT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|49611991|emb|CAG75440.1| asparaginyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 466

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 122/334 (36%), Gaps = 71/334 (21%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV----RSEWVLC 72
           V S V + GWV R R          RD       +A  D +CF   ++V     S +   
Sbjct: 16  VDSEVTVRGWV-RTR----------RDSKAGISFIAVYDGSCFNPLQAVVNNNLSNYQDD 64

Query: 73  IDGLVMSRSAETINANIIT----GQ-IELSAQKIEILS-VAEELPLPVFGEREYPESIRF 126
           +  L    S E I  N++     GQ  EL A  + ++  V +    P+  +R    SI +
Sbjct: 65  VLRLTTGCSVE-ITGNVVASPGEGQSFELQATNVNVVGWVDDPDTYPMAAKRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +     R   EN +   STP++TAS  EGA +     
Sbjct: 121 LREVAHLRPRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLITASDTEGAGEMF--- 177

Query: 185 RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDED 224
           RV+      LP+  Q                    Q      A      +   P FR E+
Sbjct: 178 RVSTLDMENLPRTEQGKVDFSKDFFGKEAFLTVSGQLNGETYACALSNVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT--------------- 269
             + R   EF+ ++ E++F   DD+    EN+L+ VF+   N                  
Sbjct: 238 SNTARHLAEFWMIEPEVAFASLDDVAALAENLLKYVFQAVLNERADDMAFFAERVDKEAV 297

Query: 270 ------VSNNFLRICYDDAIRRYGTDKPDLRNPI 297
                 VS++F ++ Y DA+           NP+
Sbjct: 298 TRLEKFVSSDFAQVDYTDAVEILLNCGQQFENPV 331


>gi|119774820|ref|YP_927560.1| asparaginyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166231672|sp|A1S684|SYN_SHEAM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|119767320|gb|ABL99890.1| asparaginyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 466

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 126/319 (39%), Gaps = 71/319 (22%)

Query: 18  GSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G+ + + GWV   R    GI FL + D             +CF+  + V    +   +  
Sbjct: 17  GTEITVRGWVRTRRDSKAGISFLAVYD------------GSCFDAIQGVVPNALSNYNDE 64

Query: 77  VMSRSAE---TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           V+  +A     +  N++  +   S Q  E+ + A ++   V     YP +   K   ++ 
Sbjct: 65  VLKLTAGCSVEMTGNLV--ESPGSGQAFELQATAVKVTGWVDDPDTYPMAA--KRHSIEH 120

Query: 134 RRDTLHKNIVKRTRIINSM----RC------RMIAEN-FIECSTPILTASSPEGARDFLV 182
            RD  H  +  RT II ++     C      R   EN FI  STPI+TAS  EGA +   
Sbjct: 121 LRDVAH--LRPRTNIIGAVARVRNCLSQAIHRFYHENGFIWVSTPIITASDCEGAGEMFR 178

Query: 183 PSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDP 225
            S ++  +          Y Q        L  SG            + +   P FR E+ 
Sbjct: 179 VSTLDMENLPRTDAGKVDYDQDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENS 238

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR--------------GVFEEFSNGNT-- 269
            + R   EF+ ++ E++F + +DI    E++L+                F E  +G+   
Sbjct: 239 NTSRHLAEFWMVEPEVAFADLNDIAGLAESMLKYCFNAVLQERMDDMKFFAERVDGSVID 298

Query: 270 -----VSNNFLRICYDDAI 283
                VS++F ++ Y DA+
Sbjct: 299 RLQSFVSSDFAQVDYTDAV 317


>gi|327313938|ref|YP_004329375.1| lysine--tRNA ligase [Prevotella denticola F0289]
 gi|326946154|gb|AEA22039.1| lysine--tRNA ligase [Prevotella denticola F0289]
          Length = 578

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G + ++EV LFP
Sbjct: 461 RALQYGMPPTSGIGIGIDRLVMLMTGKEYIQEVLLFP 497



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 120/286 (41%), Gaps = 36/286 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---------L 71
           V ++G +   R  G   F +I+D  G  QV    D  C    K + ++           +
Sbjct: 54  VVIAGRMMGRRVMGKASFAEIQDSKGRIQVYITRDDICPGEDKDLYNKVFKKLLDIGDFI 113

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I G V              G+I + A++I +LS + + PLPV        + + E PE 
Sbjct: 114 GIKGFVFKTQ---------MGEISVHAKEITLLSKSLK-PLPVVKYKDGEAYDKFEDPEQ 163

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDF 180
            R++ R++DL   D +    +KR  ++ +MR       + E  TP L  S P GA  R F
Sbjct: 164 -RYRQRYVDLVVNDGVKDTFLKRATVLRTMRRFFDEAGYTEVETPTLQ-SIPGGASARPF 221

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDM 239
           +          Y +  A + Y + L+  GF+  ++I   FR+E    DR    EF  +++
Sbjct: 222 ITHFNALNIDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEG--MDRFHNPEFTCMEL 278

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            + + + + +++  E +L  +  E +    V      I +    RR
Sbjct: 279 YVQYKDYNWMMSFTEQLLEKICTEVNGKPEVQMGDKTISFKAPFRR 324


>gi|209519986|ref|ZP_03268765.1| lysyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209499583|gb|EDZ99659.1| lysyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 518

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 130/306 (42%), Gaps = 28/306 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  +RD  G  Q    P     E   + + +W +    +V +R
Sbjct: 78  VAIAGRMMLKRVMGKASFATVRDGSGQIQFFITPADVGQETYDAFK-KWDMG--DIVAAR 134

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-RRDTL 138
                     T + ELS +  E+  +++ L PLP        + ++++ R++DL      
Sbjct: 135 -----GVLFRTNKGELSVRCTELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVTPET 189

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA-LPQA 197
            +  + RT+ I+S+R  M   NF+E  TP+L    P GA      +  N       L  A
Sbjct: 190 RRTFLARTKAISSIRKYMADANFMEVETPMLH-PIPGGAAAKPFSTHHNALDMQMFLRIA 248

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E ++
Sbjct: 249 PELYLKRLVVGGFERVFEINRNFRNEG-VSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLI 307

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           R    +     T+         S  F R+    AI++Y    P   N  +  +    F+ 
Sbjct: 308 RQAAIDALGTATITYQGRELDLSKPFHRLTITQAIQKYA---PQYTNEQLADSA---FLR 361

Query: 309 SEFRVF 314
           +E + F
Sbjct: 362 AELKKF 367



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     +   Y RA + GMPP 
Sbjct: 426 RFELFITGREIANGFSELNDPEDQAARFKKQVDQKDAGDEEAMFYDADYIRALEYGMPPA 485

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VM+L  + ++R+V LFP
Sbjct: 486 GGCGIGIDRLVMMLTDSPSIRDVILFP 512


>gi|325853895|ref|ZP_08171411.1| lysine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325484232|gb|EGC87162.1| lysine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 578

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G + ++EV LFP
Sbjct: 461 RALQYGMPPTSGIGIGIDRLVMLMTGKEYIQEVLLFP 497



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 120/286 (41%), Gaps = 36/286 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---------L 71
           V ++G +   R  G   F +I+D  G  QV    D  C    K + ++           +
Sbjct: 54  VVIAGRMMGRRVMGKASFAEIQDSKGRIQVYITRDDICPGEDKDLYNKVFKKLLDIGDFI 113

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I G V              G+I + A++I +LS + + PLPV        + + E PE 
Sbjct: 114 GIKGFVFKTQ---------MGEISVHAKEITLLSKSLK-PLPVVKYKDGEAYDKFEDPEQ 163

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDF 180
            R++ R++DL   D +    +KR  ++ +MR       + E  TP L  S P GA  R F
Sbjct: 164 -RYRQRYVDLVVNDGVKDTFLKRATVLRTMRRFFDEAGYTEVETPTLQ-SIPGGASARPF 221

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDM 239
           +          Y +  A + Y + L+  GF+  ++I   FR+E    DR    EF  +++
Sbjct: 222 ITHFNALNIDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEG--MDRFHNPEFTCMEL 278

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            + + + + +++  E +L  +  E +    V      I +    RR
Sbjct: 279 YVQYKDYNWMMSFTEQLLEKICTEVNGKPEVQMGDKTISFKAPFRR 324


>gi|325270796|ref|ZP_08137387.1| lysine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324986912|gb|EGC18904.1| lysine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 578

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G + ++EV LFP
Sbjct: 461 RALQYGMPPTSGIGIGIDRLVMLMTGKEYIQEVLLFP 497



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 18/277 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +I+D  G  QV    D  C    K + ++    +  +    
Sbjct: 54  VVIAGRMMGRRVMGKASFAEIQDSKGRIQVYITRDDICPGEDKDLYNKVFKKLLDIGDFI 113

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             +        G+I + A++I +LS + + PLPV        + + E PE  R++ R++D
Sbjct: 114 GVKGFVFKTQMGEISVHAKEITLLSKSLK-PLPVVKYKDGEAYDKFEDPEQ-RYRQRYVD 171

Query: 133 LR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQG 189
           L   D +    +KR  ++ +MR       + E  TP L  S P GA  R F+        
Sbjct: 172 LVVNDGVKDTFLKRATVLRTMRRFFDEAGYTEVETPTLQ-SIPGGASARPFITHFNALNI 230

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDMEMSFVEQDD 248
             Y +  A + Y + L+  GF+  ++I   FR+E    DR    EF  +++ + + + + 
Sbjct: 231 DMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEG--MDRFHNPEFTCMELYVQYKDYNW 287

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +++  E +L  +  E +    V      I +    RR
Sbjct: 288 MMSFTEQLLEKICTEVNGKPEVQMGDKTISFKAPFRR 324


>gi|293396749|ref|ZP_06641025.1| asparagine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291421013|gb|EFE94266.1| asparagine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 466

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 44/279 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV------ 65
           G + V S V + GWV   R    GI FL + D             +CF+  ++V      
Sbjct: 12  GRAAVDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPLQAVVNNSLP 59

Query: 66  --RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122
             + E +    G  +  + + + +       EL A  I+++  V +    P+  +R    
Sbjct: 60  NYQDEVLHLTTGCSVEVTGKVVASPGEGQSFELQATAIKVVGWVDDPDTYPMAAKRH--- 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDF 180
           SI +      LR  T     V R R  +     R + EN +   STP++TAS  EGA + 
Sbjct: 117 SIEYLREVAHLRPRTNLIGAVARVRHTLAQAIHRFLHENGYFWVSTPLITASDTEGAGEM 176

Query: 181 LVPS--------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
              S        R ++G+      F+   A      Q      A    + +   P FR E
Sbjct: 177 FRVSTLDLENLPRDDKGAVDFSQDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAE 236

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           +  + R   EF+ ++ E++F   DD+    E++L+ VF+
Sbjct: 237 NSNTSRHLAEFWMVEPEVAFASLDDVAGLAESMLKYVFQ 275



 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+ Q    +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDQRLEEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|70728520|ref|YP_258269.1| lysyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|123734892|sp|Q4KHL4|SYK_PSEF5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|68342819|gb|AAY90425.1| lysyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 500

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 11/223 (4%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E   SV++ W +   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLSEETLASVKT-WDM---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTNVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEEVRQTFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L T      A+ F           + L  AP+ Y + L+  GF++ F+
Sbjct: 194 MKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFR 294



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 458 RALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFP 494


>gi|330839287|ref|YP_004413867.1| Lysyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329747051|gb|AEC00408.1| Lysyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 511

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 114/267 (42%), Gaps = 22/267 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSF---------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           HRY      D  +++  S          V ++G +  +R HG   F  + D  G  Q+  
Sbjct: 39  HRYEVTRHADELLAEFASLGEEAESETEVSIAGRLMAIRGHGKASFAVLMDLSGKIQIYF 98

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELP 111
             D    E  K  +   +L I  ++  R    +      G++ +      +LS +   LP
Sbjct: 99  KLDVLGEEKYKEFK---LLDIGDIIGVRG---VVFRTRRGELTVRVDDFTLLSKSLRPLP 152

Query: 112 LPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL- 169
               G ++    +R++ R++DL  +  +    + RT+II S+R  +    F+E  TP++ 
Sbjct: 153 EKFHGLKDV--EMRYRQRYVDLIMNPEVKDTFIARTKIIQSIRRYLDERGFLEVETPVMS 210

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
           T +    AR F+          Y L  A +   + L+  G +R ++I   FR+E      
Sbjct: 211 TIAGGAAARPFVTYHNALDMKLY-LRIATELNLKRLIVGGLERVYEIGRIFRNEGIDVRH 269

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENV 256
            P EF  +++  ++ + +D+++  E +
Sbjct: 270 NP-EFTSIEIYQAYADYNDLMDVTEGI 295



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL  + ++R+V  FP
Sbjct: 460 AMEYGLPPTGGLGIGIDRLVMLLTDSSSIRDVLFFP 495


>gi|310799281|gb|EFQ34174.1| asparaginyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 523

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLYRAF----QCGMPPH 536
           LV +  EIA G +R H  E +L+     G+    V+ R    GG    +    + G  PH
Sbjct: 429 LVPDLCEIAGGSMREHRLEPLLETMQARGMGSPSVDGRGSHSGGDLDWYVDLRRWGSNPH 488

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           GG   G DR++  L+G  NVR+V  FP     CD
Sbjct: 489 GGFGLGFDRLLSYLVGVPNVRDVVAFPRWFGRCD 522



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 26/139 (18%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS-------------- 190
           R+  I  +     + +F++   PI+T+S  EGA +      V  GS              
Sbjct: 154 RSEAIAVLTQFFASRSFVQTHPPIITSSDCEGAGEVF---NVTTGSAETSTTPMSSGKDK 210

Query: 191 -----FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                F+  P+      QL    +A      + ++P FR E   + R   EFY L+ EMS
Sbjct: 211 AAGNLFFRSPKYLTVSSQLHLEALAQSLGDVWTLSPTFRAERSDTSRHMSEFYMLEAEMS 270

Query: 243 FVEQ-DDILNTMENVLRGV 260
           F++  D +++ +E++LR +
Sbjct: 271 FIDSMDHVMDLVEDMLRSL 289


>gi|307729219|ref|YP_003906443.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307583754|gb|ADN57152.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 508

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 118/283 (41%), Gaps = 20/283 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  +RD  G  Q    P     E   + + +W +   G +++ 
Sbjct: 68  VAIAGRMMLKRVMGKASFATVRDGSGQIQFFITPADVGQETYDAFK-KWDM---GDIVAA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                  N   G++ +   ++ +LS +   PLP        + ++++ R++DL       
Sbjct: 124 RGVLFRTN--KGELSVRCTQLRLLSKSLR-PLPDKFHGLSDQEMKYRQRYVDLIVTPETR 180

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           K  V RT+ I+S+R  M    F+E  TP+L        A+ F           + L  AP
Sbjct: 181 KTFVARTKAISSIRKFMADAGFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMF-LRIAP 239

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E ++R
Sbjct: 240 ELYLKRLVVGGFERVFEINRNFRNEG-VSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLIR 298

Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
               +     T+         S  F R+    AI++Y     D
Sbjct: 299 QAAIDALGTATITYQGRELDLSKPFHRLTITQAIQKYAPQYTD 341



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     +   Y RA + GMPP 
Sbjct: 416 RFELFITGREIANGFSELNDPEDQAARFKKQVDQKDAGDEEAMFYDADYIRALEYGMPPA 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VM+L  + ++R+V LFP
Sbjct: 476 GGCGIGIDRLVMMLTDSPSIRDVILFP 502


>gi|206579329|ref|YP_002239422.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|206568387|gb|ACI10163.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 466

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 108/277 (38%), Gaps = 48/277 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    G  FL + D             +CF+  ++V +  +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGFSFLAVYD------------GSCFDPVQAVINNSLPNYNQ 63

Query: 76  LVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFK 127
            V+  +  T  + I+TG++  S    Q  EI + + E+   V     YP      SI + 
Sbjct: 64  EVLRLT--TGCSVIVTGKVVASQGQGQSFEIQATSVEVTGWVEDPDTYPMAAKRHSIEYL 121

Query: 128 YRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
                LR  T     V R R  +  ++      + F   STP++TAS  EGA +     R
Sbjct: 122 REVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF---R 178

Query: 186 VNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDP 225
           V+      LP+  Q                    Q      A    + +   P FR E+ 
Sbjct: 179 VSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENS 238

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            + R   EF+ L+ E++F   +D+    E +L+ VF+
Sbjct: 239 NTSRHLAEFWMLEPEVAFASLNDVAGLAEAMLKYVFK 275



 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|149699380|ref|XP_001501660.1| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 3 [Equus caballus]
          Length = 423

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 14/206 (6%)

Query: 122 ESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--R 178
           +  R++ R+LDL   D + +  + R++II  +R  +    F+E  TP++    P GA  +
Sbjct: 91  KETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGGAVAK 149

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +
Sbjct: 150 PFITYHNELDMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCE 207

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
             M++ +  D++   E ++ G+  +    N       R   DD     G + P  R    
Sbjct: 208 FYMAYADYHDLMEITEKMISGMV-KLPETNLFETEETRKILDDICVAKGVECPPPR---- 262

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGY 324
               T   +      F ++  +NP +
Sbjct: 263 ---TTARLLDKLVGEFLEVTCINPTF 285



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 360 ALEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFP 395


>gi|146304908|ref|YP_001192224.1| lysyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|145703158|gb|ABP96300.1| lysyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 496

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 15/241 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR +G V  +R HG   F+DI D     Q+    +    E+       + +   G ++  
Sbjct: 57  VRTAGRVANLRRHGKASFVDIFDDGEKLQLYLRVN----ELGDKYEYFFKVVDRGDIIGI 112

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139
             +       T + EL+    +   +A+ L  P       PE  R+ +R++D L  D   
Sbjct: 113 QGDLF----FTAKGELTLLVKDFAMLAKSLIEPPDWSTMSPE-FRYSHRYVDFLYNDNAR 167

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQ-GSFYALPQA 197
           + +  R +II  +R  +  E FIE  TPIL        AR F   S VN     + L  +
Sbjct: 168 RFMETRFKIIREIRNILGEEGFIEVETPILQPVYGGALARPF--KSHVNYLNEDWYLRIS 225

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + Y +  +  GF++ F+I   FR+ED      P EF  +++  ++ + +DI++  E + 
Sbjct: 226 LELYLKRFIVGGFNKVFEIGKVFRNEDIDVTHNP-EFTLMELYWAYADYNDIMDLTERLF 284

Query: 258 R 258
           +
Sbjct: 285 K 285



 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A   GMPP GG+  GIDR+VML    ++++EV  FPM
Sbjct: 452 ALSYGMPPTGGLGIGIDRLVMLFTNNQSIKEVIPFPM 488


>gi|51245481|ref|YP_065365.1| lysyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|50876518|emb|CAG36358.1| probable lysyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 503

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 109/249 (43%), Gaps = 14/249 (5%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G V  +R  G   F  + D  G  Q+    D    EI    + +W +   G ++    
Sbjct: 60  VAGRVMAMRKFGKAAFFQVMDKTGRVQIYIKKDVIGEEIFAQFK-KWDI---GDIVGIKG 115

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
                 +  G++ ++A  ++++S +   PLP           R++ R++DL      + +
Sbjct: 116 HLFKTKV--GELSIAASSVQMISKSLR-PLPDKWHGLSDVETRYRQRYVDLIVTPESREV 172

Query: 143 V-KRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQ 199
             KR  II  +R  +    F+E  TP++ A  P GA  + F           Y L  AP+
Sbjct: 173 FRKRGEIIRHIRDFLSDRGFMEVETPMMQAV-PGGATAKPFKTHHNALDMDLY-LRVAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G +R F+I   FR+E   +   P EF  L+   ++   +D+++  E ++  
Sbjct: 231 LYLKRLLVGGLERVFEINRNFRNEGLSTRHNP-EFTMLEFYQAYATYEDMMDITEEMVST 289

Query: 260 VFEEFSNGN 268
             E+  NG+
Sbjct: 290 ACEKV-NGS 297



 Score = 40.4 bits (93), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 23/37 (62%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMP   G   GIDR+ MLL  + ++R+V  FP
Sbjct: 451 RALEYGMPSAAGEGIGIDRLTMLLTDSPSIRDVIFFP 487


>gi|322832253|ref|YP_004212280.1| asparaginyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321167454|gb|ADW73153.1| asparaginyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 466

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 110/278 (39%), Gaps = 42/278 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G + V S V + GWV   R    GI F+ + D      + A  +++     + V      
Sbjct: 12  GRAAVDSEVTVRGWVRTRRDSKAGISFVAVYDGSCFNPLQAVINNSLPNYQEDVLRLTTG 71

Query: 72  C---IDGLVMSRSAETINANIITGQ-IELSAQKIEILS-VAEELPLPVFGEREYPESIRF 126
           C   + G+V++   E        GQ  EL A  + ++  V +    P+  +R    SI +
Sbjct: 72  CSVEVTGIVVASPGE--------GQSFELQATTVNVVGWVDDPDTYPMAAKRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  ++    R   EN +   STP++TAS  EGA +     
Sbjct: 121 LREVAHLRPRTNLIGAVARVRNTLSQAIHRFYHENGYFWVSTPLITASDTEGAGEMF--- 177

Query: 185 RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDED 224
           RV+      LP+  +                    Q      A    + +   P FR E+
Sbjct: 178 RVSTLDLQNLPRTDKGEIDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             + R   EF+ ++ E++F   DDI    EN+L+ VF+
Sbjct: 238 SNTSRHLAEFWMVEPEVAFATLDDIAALAENMLKYVFK 275



 Score = 38.1 bits (87), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R+V  + G +NVR+V  FP +
Sbjct: 436 LGFERLVAYVTGVQNVRDVIPFPRT 460


>gi|313884406|ref|ZP_07818167.1| lysine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620190|gb|EFR31618.1| lysine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 504

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GGI  G+DR+ MLL  A+++R+V LFP  +N
Sbjct: 464 ALEYGMPPTGGIGIGVDRLAMLLTDAQSIRDVLLFPTLRN 503



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 14/253 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G +   R  G   F  I+D  G  Q+    D+   +     R  W    D G ++ 
Sbjct: 69  VAIAGRLVSKRGKGKAGFAHIQDMAGRIQIYVRKDAIGED-----RYLWFKQADLGDIVG 123

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138
                   N  TG++ + A++   L+ A   PLP           R++ R+LDL   D  
Sbjct: 124 VKGYVFKTN--TGELSVHAEEFYPLTKALR-PLPDKFHGLTNVEQRYRQRYLDLISNDDS 180

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
            +  + R+ II  +R  +    ++E  TP+L   +    A+ F+          Y L  A
Sbjct: 181 RQRFINRSMIIRQIRRYLDDLGYLEVETPVLHNIAGGATAKPFITHHNALDMELY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  GF++ +++   FR+E   +   P EF  +++  ++    D ++ +EN++
Sbjct: 240 TELHLKRLVVGGFEKVYELGRVFRNEGIDTTHNP-EFTTIEIYTAYSVYTDCMDLVENLI 298

Query: 258 RGVFEEFSNGNTV 270
           R V +E + G TV
Sbjct: 299 RTVAKE-AIGQTV 310


>gi|218262600|ref|ZP_03476997.1| hypothetical protein PRABACTJOHN_02676 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223276|gb|EEC95926.1| hypothetical protein PRABACTJOHN_02676 [Parabacteroides johnsonii
           DSM 18315]
          Length = 208

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP
Sbjct: 92  RALQFGMPPTSGIGIGIDRLVMLMTGQTTIQEVLLFP 128


>gi|304390680|ref|ZP_07372633.1| lysine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304326436|gb|EFL93681.1| lysine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 521

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 21/235 (8%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEWVLC-- 72
           +   FV L+G V  +R  G + F  +++  G T Q++ +      E   + ++E  L   
Sbjct: 74  ETAEFVGLAGRVRLMRSSGKLAFATLQEGNGSTIQIMISEREVGPESMSAYKAEVDLGDH 133

Query: 73  --IDGLVMSRSAETINANIITGQIELSA----QKIEILSVAEELPLPVFGEREYPESIRF 126
             + G V+S     ++  + + Q+   A     K  I    EE+ L         E +R 
Sbjct: 134 LFVHGRVISSKRGELSIFVDSWQLTCKALRPLPKSYINEAGEEVSLS--------EDMRV 185

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R LD+      +++V+ R+R++ ++R  +   ++IE  TP+L T      AR F+   
Sbjct: 186 RRRDLDMIMRPAARDMVRNRSRVVQTLRRYLDEHDYIEVETPMLQTLHGGAAARPFVTHM 245

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  Y L  AP+ + +  +  G D+ F+I   FR+E   S   P EF  L++
Sbjct: 246 NAYDTELY-LRIAPELFLKRCLIGGIDKVFEINRNFRNEGADSSHSP-EFTMLEV 298



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 13/92 (14%)

Query: 481 QYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           ++DL+  GFE+A+G          R    +  L A +    + EV E+       + + G
Sbjct: 431 KWDLIIRGFEVATGYSELNDPVVQRARFEQQALDAANGDPEAMEVDED----FLISMEQG 486

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           MPP GG+  G+DR++M L G+  +RE   FP+
Sbjct: 487 MPPAGGMGMGLDRLLMTLTGS-GIRETITFPL 517


>gi|298488302|ref|ZP_07006334.1| Lysyl-tRNA synthetase (class II) [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298157124|gb|EFH98212.1| Lysyl-tRNA synthetase (class II) [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 500

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 20/263 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E    V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLPEETLAEVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTTVRLLTKSLR-PLPDKHNGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L T      A+ F           + L  AP+ Y + L+  GF++ F+
Sbjct: 194 MKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRYGTD 289
           V      F+R+   D+I +Y  D
Sbjct: 312 VFHFGEPFVRLSVFDSILKYNPD 334



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 408 RFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTDSPSIRDVILFP 494


>gi|300722558|ref|YP_003711848.1| asparagine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297629065|emb|CBJ89650.1| asparagine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 466

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/328 (21%), Positives = 124/328 (37%), Gaps = 59/328 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           V S V + GW+   R    GI FL + D   +   Q V N +   ++       E +   
Sbjct: 16  VDSEVTVRGWIRTRRDSKAGISFLAVHDGSCFNPLQAVVNNNLPNYQ------DEVLHLT 69

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLD 132
            G  +  +   + +       EL A K+ ++ + ++    P+  +R    SI +      
Sbjct: 70  TGCSVEITGTVVESQGTGQSFELQATKVVVVGMVDDPDTYPMAAKRH---SIEYLREVAH 126

Query: 133 LRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T     V R R  +  ++      + F   STP++TAS  EGA +     RV+   
Sbjct: 127 LRPRTNLIGAVARVRHTLAQALHRFFHEKGFFWVSTPLITASDTEGAGEMF---RVSTLD 183

Query: 191 FYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
              LP+  +                    Q      A      +   P FR E+  + R 
Sbjct: 184 LQNLPRTDKGEVDFSQDFFGREAFLTVSGQLNGEAYACALSNVYTFGPTFRAENSNTSRH 243

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVF----EEFSNG-----------------NT 269
             EF+ ++ E++F + +DI    E++L+ VF    EE ++                    
Sbjct: 244 LAEFWMVEPEVAFADLNDIAKLSEDMLKYVFKAALEERADDLAFFAERVDKDVITRLEKF 303

Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           V ++F+++ Y DAI+          NP+
Sbjct: 304 VDSDFIQLDYTDAIKILENCGQKFENPV 331


>gi|303232413|ref|ZP_07319105.1| lysine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481497|gb|EFL44565.1| lysine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 527

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 20/227 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            RY T + GD   +D  S   ++G +  +R  G + F+ + D  G  Q+          I
Sbjct: 59  ERYATLADGD-SATDTYS---VAGRIRAIRKQGKVCFIVLEDKTGTIQLF-------LRI 107

Query: 62  AKSVRSEWVLC--ID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
                  W L   +D G ++      +      GQ+ ++     +LS +   PLP     
Sbjct: 108 NNVSEENWNLLGYLDLGDILQAEGSVVRTR--RGQLSIAVTAFVLLSKSTR-PLPEKFHG 164

Query: 119 EYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
              + IR++ R++DL  +   +++ VKR+RI++ +R  M  ++++E  TP++ A      
Sbjct: 165 LADKEIRYRQRYVDLIMNPDVRDVFVKRSRIVSLIRRFMEEQHYLEVETPMMHAILGGAN 224

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           A+ F          FY L  A +   + L+  G DR F+I   FR+E
Sbjct: 225 AKPFTTHFNALDCDFY-LRIATELPLKRLIVGGMDRVFEIGRQFRNE 270



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GGI  GIDR++ML     ++R+V LFP
Sbjct: 471 RALEYGMPPCGGIGYGIDRMIMLFCNQASIRDVLLFP 507


>gi|296158327|ref|ZP_06841158.1| lysyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295891271|gb|EFG71058.1| lysyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 527

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 129/306 (42%), Gaps = 28/306 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  +RD  G  Q    P     E   + + +W +    +V +R
Sbjct: 87  VAIAGRMMLKRVMGKASFATVRDGSGQIQFFITPADVGQETYDAFK-KWDMG--DIVAAR 143

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-RRDTL 138
                     T + ELS +  E+  +++ L PLP        + ++++ R++DL      
Sbjct: 144 -----GVLFRTNKGELSVRCTELRLLSKSLRPLPDKFHGLSDQEMKYRQRYVDLIVTPET 198

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            K  V RTR I+S+R  M   +F+E  TP+L        A+ F           + L  A
Sbjct: 199 RKTFVARTRAISSIRKFMADADFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMF-LRIA 257

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E ++
Sbjct: 258 PELYLKRLVVGGFERVFEINRNFRNEG-VSVRHNPEFTMIEFYAAYTDYRWLMDFTEQLI 316

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           R    +     T++           F R+    AI++Y    P   N  +  +    F+ 
Sbjct: 317 RQAAIDALGTATITYQGRELDLAKPFHRLTITQAIQKYA---PQYTNEQLADSA---FLR 370

Query: 309 SEFRVF 314
           +E + F
Sbjct: 371 TELKKF 376



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     +   Y RA + GMPP 
Sbjct: 435 RFELFITGREIANGFSELNDPEDQAARFRKQVDQKDAGDEEAMFYDADYIRALEYGMPPA 494

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 495 GGCGIGIDRLVMLLTDSPSIRDVILFP 521


>gi|284931085|gb|ADC31023.1| lysyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 492

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 15/260 (5%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   S   L    +   + +SG V  +R      F+ I+D Y   Q+  N +    ++ 
Sbjct: 44  KYDQFSKEQLAEMQMDKPITVSGRVILIRR----TFILIQDFYSELQLYINKNKQP-DLF 98

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K       L   G V+  + + +  N  T ++ L  + ++I+S +  +P   F      E
Sbjct: 99  KYFNDYLDL---GDVVCATGKPMKTN--TNELSLDLESLKIISKSLRVPPEKFHGIA-DE 152

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDF 180
            IR + R+LDL  +   K   V R++II +MR       F+E  TP L A      A+ F
Sbjct: 153 EIRSRKRYLDLVYNKESKERFVYRSKIIAAMRQYFNENGFLEVETPFLHAQIGGAAAKPF 212

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +         +Y L  AP+   + L+   F++ ++I  CFR+E   S   P EF  ++  
Sbjct: 213 ITRYNALDRDYY-LRIAPELPLKKLIVGSFEKIYEIGKCFRNEGMDSTHNP-EFTSVETY 270

Query: 241 MSFVEQDDILNTMENVLRGV 260
           +++V+   ++   E +++ +
Sbjct: 271 VAYVDYIYMMELTEALIKYI 290



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR+VM+L G  ++R++  FP
Sbjct: 452 ALENGLPPTGGLGIGVDRLVMMLTGTTSIRDILFFP 487


>gi|288936272|ref|YP_003440331.1| asparaginyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|290510672|ref|ZP_06550042.1| asparaginyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|288890981|gb|ADC59299.1| asparaginyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|289777388|gb|EFD85386.1| asparaginyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 466

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 108/277 (38%), Gaps = 48/277 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    G  FL + D             +CF+  ++V +  +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGFSFLAVYD------------GSCFDPVQAVINNSLPNYNQ 63

Query: 76  LVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFK 127
            V+  +  T  + I+TG++  S    Q  EI + + E+   V     YP      SI + 
Sbjct: 64  EVLRLT--TGCSVIVTGKVVASQGQGQSFEIQATSVEVTGWVEDPDTYPMAAKRHSIEYL 121

Query: 128 YRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
                LR  T     V R R  +  ++      + F   STP++TAS  EGA +     R
Sbjct: 122 REVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF---R 178

Query: 186 VNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDP 225
           V+      LP+  Q                    Q      A    + +   P FR E+ 
Sbjct: 179 VSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENS 238

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            + R   EF+ L+ E++F   +D+    E +L+ VF+
Sbjct: 239 NTSRHLAEFWMLEPEVAFANLNDVAGLAEAMLKYVFK 275



 Score = 37.4 bits (85), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|113461419|ref|YP_719488.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|170718955|ref|YP_001784121.1| lysyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|123132224|sp|Q0I4V7|SYK3_HAES1 RecName: Full=Uncharacterized protein YjeA
 gi|189082340|sp|B0USM2|SYK3_HAES2 RecName: Full=Uncharacterized protein YjeA
 gi|112823462|gb|ABI25551.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|168827084|gb|ACA32455.1| lysyl-tRNA synthetase-related protein GenX [Haemophilus somnus
           2336]
          Length = 323

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 18/124 (14%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
           + K I   H P T  Q  +  +   D    + F++     G E+A+G   N +++   Q 
Sbjct: 204 QNKPIAVYHFPAT--QAALAQISSEDHRVAERFEF--YYKGIELANGF--NELTDAQEQE 257

Query: 508 F---------SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
                       +G+ +  +++RF G   A Q G+P   G+A G+DR++ML LGA+N+ E
Sbjct: 258 HRFNQDNRLREQLGLPQHEIDHRFLG---ALQAGLPNTAGVALGVDRLIMLALGAENISE 314

Query: 559 VSLF 562
           V  F
Sbjct: 315 VISF 318


>gi|298345631|ref|YP_003718318.1| lysine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|298235692|gb|ADI66824.1| lysine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
          Length = 521

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 21/235 (8%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEWVLC-- 72
           +   FV L+G V  +R  G + F  +++  G T Q++ +      E   + ++E  L   
Sbjct: 74  ETAEFVGLAGRVRLMRSSGKLAFATLQEGNGSTIQIMISEREVGPESMSAYKAEVDLGDH 133

Query: 73  --IDGLVMSRSAETINANIITGQIELSA----QKIEILSVAEELPLPVFGEREYPESIRF 126
             + G V+S     ++  + + Q+   A     K  I    EE+ L         E +R 
Sbjct: 134 LFVHGRVISSKRGELSIFVDSWQLTCKALRPLPKSYINEAGEEVSLS--------EDMRV 185

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R LD+      +++V+ R+R++ ++R  +   ++IE  TP+L T      AR F+   
Sbjct: 186 RRRDLDMIMRPAARDMVRNRSRVVQTLRRYLDEHDYIEVETPMLQTLHGGAAARPFVTHM 245

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  Y L  AP+ + +  +  G D+ F+I   FR+E   S   P EF  L++
Sbjct: 246 NAYDTELY-LRIAPELFLKRCLIGGIDKVFEINRNFRNEGADSSHSP-EFTMLEV 298



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 13/92 (14%)

Query: 481 QYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           ++DL+  GFE+A+G          R    +  L A +    + EV E+       + + G
Sbjct: 431 KWDLIIRGFEVATGYSELNDPVVQRARFEQQALDAANGDPEAMEVDED----FLISMEQG 486

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           MPP GG+  G+DR++M L G+  +RE   FP+
Sbjct: 487 MPPAGGMGMGLDRLLMTLTGS-GIRETITFPL 517


>gi|152969518|ref|YP_001334627.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238893987|ref|YP_002918721.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|262040970|ref|ZP_06014192.1| asparagine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330013883|ref|ZP_08307823.1| asparagine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|166231668|sp|A6T726|SYN_KLEP7 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|150954367|gb|ABR76397.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238546303|dbj|BAH62654.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259041664|gb|EEW42713.1| asparagine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328533315|gb|EGF60063.1| asparagine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 466

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 108/277 (38%), Gaps = 48/277 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    G  FL + D             +CF+  ++V +  +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGFSFLAVYD------------GSCFDPVQAVINNSLPNYNQ 63

Query: 76  LVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFK 127
            V+  +  T  + I+TG++  S    Q  EI + + E+   V     YP      SI + 
Sbjct: 64  EVLRLT--TGCSVIVTGKVVASQGQGQSFEIQATSVEVTGWVEDPDTYPMAAKRHSIEYL 121

Query: 128 YRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
                LR  T     V R R  +  ++      + F   STP++TAS  EGA +     R
Sbjct: 122 REVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF---R 178

Query: 186 VNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDP 225
           V+      LP+  Q                    Q      A    + +   P FR E+ 
Sbjct: 179 VSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENS 238

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            + R   EF+ L+ E++F   +D+    E +L+ VF+
Sbjct: 239 NTSRHLAEFWMLEPEVAFANLNDVAGLAEAMLKYVFK 275



 Score = 37.4 bits (85), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|167624184|ref|YP_001674478.1| asparaginyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189083479|sp|B0TUU1|SYN_SHEHH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|167354206|gb|ABZ76819.1| asparaginyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 466

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 131/351 (37%), Gaps = 75/351 (21%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           +GS + + GWV   R    GI FL + D             +CF+  + V         +
Sbjct: 16  IGSQITVRGWVRSRRDSKAGISFLAVYD------------GSCFDPIQGVVPNNLENYTN 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + E + +       E+   K+E++   E+    P+  +R    SI +
Sbjct: 64  EVLKLTAGCSVVMTGEVVESPGKGQAFEMQVTKLEVVGFVEDPDTYPMAAKRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +I  STP++TAS  EGA +     
Sbjct: 121 LRELAHLRPRTNIIGAVARVRNCLSQAIHRFYNEQGYIWVSTPLITASDTEGAGEMF--- 177

Query: 185 RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDED 224
           RV+      LP+  +                    Q      A    + +   P FR E+
Sbjct: 178 RVSTLDLENLPRTDKGTVDYSEDFFGKESFLTVSGQLNAETYACALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT----- 269
             + R   EF+ ++ E++F   DD     E++L+  F+          EF          
Sbjct: 238 SNTSRHLAEFWMVEPEVAFANLDDAAKLAEDMLKYCFKAVLEERRDDLEFFAQRVEKTAI 297

Query: 270 ------VSNNFLRICYDDAIR-RYGTDKP---DLRNPIIMHNVTEHFVHSE 310
                 VS++F +I Y DAI      DK    D+   I +H+  E ++  E
Sbjct: 298 ERLEAFVSSDFAQIDYTDAIEILKACDKDFEYDVEWGIDLHSEHERYLAEE 348


>gi|77457287|ref|YP_346792.1| lysyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|123605817|sp|Q3KHF3|SYK_PSEPF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|77381290|gb|ABA72803.1| lysyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 499

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 118/260 (45%), Gaps = 20/260 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E   +V++ W +   G +++  AE   A    G + + 
Sbjct: 80  FMVIQDMTGRIQVYVNRKTLSEETLAAVKT-WDM---GDIIA--AEGTLARSGKGDLYVE 133

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 134 MTSVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFL 192

Query: 157 IAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L T      A+ F           + L  AP+ Y + L+  GF++ F+
Sbjct: 193 MKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFE 251

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 252 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDK 310

Query: 270 V---SNNFLRICYDDAIRRY 286
           V      F+R+   D+I +Y
Sbjct: 311 VFHFGEPFVRLSVFDSILKY 330



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 457 RALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFP 493


>gi|311743345|ref|ZP_07717152.1| lysine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313413|gb|EFQ83323.1| lysine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 502

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 13/93 (13%)

Query: 482 YDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           +DL+ NG E+A            R  + E    A +    + +V E+      RA + GM
Sbjct: 413 WDLIINGVELAPAYSELNDPVVQRERLEEQARLAAAGDPEANDVDED----FLRALEFGM 468

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG+  G+DR+VMLLLG   +RE  LFP  +
Sbjct: 469 PPAGGLGLGVDRLVMLLLGI-GIREAILFPTQR 500


>gi|78356412|ref|YP_387861.1| lysyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218817|gb|ABB38166.1| lysyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 532

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/289 (20%), Positives = 120/289 (41%), Gaps = 31/289 (10%)

Query: 24  SGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWVLCIDGLVMSR 80
           +G +   R  G + F  + D  G  Q  A+ DS     + + K      ++ + G +   
Sbjct: 99  AGRIVSQRSFGKVTFFHLLDKSGKMQCYASRDSLGADAYSVFKKFDIGDIVGVCGTLFRT 158

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                     TG++ +    +++L+ +   LP    G ++     R++ R++DL      
Sbjct: 159 K---------TGELTIQCSSVQLLTKSIRPLPEKYHGLKDV--ETRYRQRYVDLIVTPRT 207

Query: 140 KNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQ 196
           + I  KR +I+   R  M    F+E  TP++    P GA  + F+          Y +  
Sbjct: 208 REIFRKRGQIVREFRNFMEERGFMEVETPMMQPI-PGGATAKPFVTHHNALDMQLY-MRI 265

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF++ F+I   FR+E   +   P EF   +   ++   +D+++  E +
Sbjct: 266 APELYLKRLLVGGFEKVFEINRNFRNEGISTQHNP-EFTMCEFYWAYARFEDLMDLTEQL 324

Query: 257 LRGVFEEFSNGNTVS----------NNFLRICYDDAIRRYGTDKPDLRN 295
              + ++      ++            + R+ + D++ + G   P+  N
Sbjct: 325 FSRLAQKVCGSTVITYQGQEVDLTPGKWQRMTFHDSLEKVGGHAPEFYN 373



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL  + ++REV LFP+
Sbjct: 490 RALEYGMPPAAGQGVGIDRLVMLLTDSASIREVILFPL 527


>gi|325525096|gb|EGD02989.1| lysyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 508

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 21/245 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q    P+    E   + + +W L   G +++ 
Sbjct: 68  VAIAGRMMLKRVMGKASFATVQDGSGQIQFFVTPNDVGAETYDAFK-KWDL---GDIVAA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----RR 135
                  N   G++ +   ++ +LS A   PLP        + +R++ R++DL      R
Sbjct: 124 RGVLFRTN--KGELSVKCTELRLLSKALR-PLPDKFHGLADQEMRYRQRYVDLIVTPETR 180

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           DT       RT+ I S+R  M   +F+E  TP+L    P GA  + F+          + 
Sbjct: 181 DTFRA----RTKAIASIRKFMGDADFMEVETPMLH-PIPGGAAAKPFVTHHNALDMQMF- 234

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  
Sbjct: 235 LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDFT 293

Query: 254 ENVLR 258
           E ++R
Sbjct: 294 EQLIR 298



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFMTGREIANGFSELNDPEDQAARFRKQVEQKDAGDEEAMFFDADYIRALEYGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|308183983|ref|YP_003928116.1| lysyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308059903|gb|ADO01799.1| lysyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 501

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 19/232 (8%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---IAKSVRSEWVLCIDGLVMSRS 81
           G V  +R  G   F+ + D   I Q   + +    E   + K +    ++ ++G   +  
Sbjct: 62  GRVKLLRLMGKACFIKVEDESAILQAYVSQNELNDEFKSLKKHLEVGDIVLVEGFPFATK 121

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                    TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K+
Sbjct: 122 ---------TGELSIHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPSVKD 171

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAP 198
           + K R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP
Sbjct: 172 VFKKRSLIVSSVRKFFEMEGFLEVETPMMHPI-PGGANARPFITYHNALEVERY-LRIAP 229

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           + Y + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 230 ELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|284929667|ref|YP_003422189.1| lysyl-tRNA synthetase (class II) [cyanobacterium UCYN-A]
 gi|284810111|gb|ADB95808.1| lysyl-tRNA synthetase (class II) [cyanobacterium UCYN-A]
          Length = 514

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/288 (19%), Positives = 124/288 (43%), Gaps = 25/288 (8%)

Query: 11  DLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV----------VANPDSACF 59
           DLG   ++   V L+G +   R  G + F  ++D  G  Q+          ++N ++   
Sbjct: 57  DLGEGEELDKEVSLAGRIMARRVFGKLAFFTLQDETGNIQLYLDKKIIQDNMSNIENPFN 116

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
            + K + +  ++ + G +              G++ +  +  EIL+ +  LPLP      
Sbjct: 117 HLKKLIDTGDIIGVTGSIKKTEK---------GELSIKVKTYEILTKSL-LPLPDKWHGL 166

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASS-PEGA 177
                R++ R++DL  +   +   + R+++I+S+R  +    F+E  TP+L + +    A
Sbjct: 167 TDREKRYRQRYIDLIVNPSTRETFRCRSKVISSIRKFLEERGFLEIETPVLQSEAGGADA 226

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R F+          Y L  A + + + L+  GF++ F+I   FR+E   +   P EF  +
Sbjct: 227 RPFITHHNTLNMDLY-LRIATELHLKRLIVGGFEKVFEIGRIFRNEGISTKHNP-EFTSI 284

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           ++  ++ +   ++   E ++  +  +      +     +I +    R+
Sbjct: 285 EIYEAYSDYYGMMELTEKIITRIIHDIGQDTIIECQGQKINFSQPWRK 332



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GG+  GIDR++MLL  + ++R+V  FP+ +N
Sbjct: 470 ALEYGMPPTGGLGIGIDRLIMLLTNSASIRDVIAFPLLKN 509


>gi|75764905|ref|ZP_00744256.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74487607|gb|EAO51472.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 430

 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/293 (21%), Positives = 126/293 (43%), Gaps = 38/293 (12%)

Query: 31  RPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINA 87
           R  G   F  I+D +G  Q+    D+     +E+  +     ++ I+G V   +      
Sbjct: 4   RGKGKTGFAHIQDLHGQVQMYVRKDTVGDEEYELFTTADLGDLVGIEGKVFKTNV----- 58

Query: 88  NIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-----RRDTLHKN 141
               G++ + A    +L+ +   LP    G ++  +  R++ R+LDL      R+T    
Sbjct: 59  ----GELSVKATGFTLLTKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITSMESRETF--- 109

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
            V R++II  MR  +    ++E  TP++ A +    AR F           Y +  A + 
Sbjct: 110 -VTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELY-MRIAIEL 167

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + +DI+   EN++  +
Sbjct: 168 HLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYNDIMKLTENMVAHI 226

Query: 261 FEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++     T+            + R+   DAI+++     D  NP+ +    E
Sbjct: 227 AKKVLGTTTILYGDYEINLEPEWTRLHMVDAIKQHSG--ADFWNPMSVEEARE 277



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 388 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 430


>gi|85057408|ref|YP_456324.1| lysyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|123725349|sp|Q2NJZ8|SYK_AYWBP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|84789513|gb|ABC65245.1| lysyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 496

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 27/40 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A   GMPP GG+  GIDR+VMLL    N+R+V LFP  +N
Sbjct: 452 ALNYGMPPTGGLGMGIDRLVMLLTDTANIRDVILFPHCKN 491


>gi|294660221|ref|NP_852857.2| lysyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|298286866|sp|Q7NC34|SYK_MYCGA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|284811876|gb|AAP56425.2| lysyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930318|gb|ADC30257.1| lysyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 492

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 3/171 (1%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRII 149
           T ++ L  + ++I+S +  +P   F      E IR + R+LDL  +   K   V R++II
Sbjct: 122 TNELSLDLESLKIISKSLRVPPEKFHGIA-DEEIRSRKRYLDLVYNKESKERFVYRSKII 180

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
            +MR       F+E  TP L A     A    V         Y L  AP+   + L+   
Sbjct: 181 AAMRQYFNENGFLEVETPFLHAQIGGAAAKPFVTRYNALDRDYYLRIAPELPLKKLIVGS 240

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           F++ ++I  CFR+E   S   P EF  ++  +++V+   ++   E +++ +
Sbjct: 241 FEKIYEIGKCFRNEGMDSTHNP-EFTSVETYVAYVDYIYMMELTEAIIKYI 290



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR+VM+L G  ++R++  FP
Sbjct: 452 ALENGLPPTGGLGIGVDRLVMMLTGTTSIRDILFFP 487


>gi|262038760|ref|ZP_06012117.1| lysine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261747218|gb|EEY34700.1| lysine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 493

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VML+  + ++R+V LFP
Sbjct: 448 RALEYGMPPAGGLGIGIDRLVMLMTNSASIRDVILFP 484



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 104/241 (43%), Gaps = 17/241 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVM 78
           + +G +   R  G   F  I+D  G  Q     D      +EI K +     + I+G + 
Sbjct: 54  KTAGRIVAFRRMGKNGFGHIQDPTGKLQYYVKKDEVGEEQYEIYKKLGLGDFIGIEGTLF 113

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT- 137
                       TG++ L A+  E+LS     PLP           R++ R++DL  ++ 
Sbjct: 114 RTQ---------TGELTLRAKSFEVLS-KNIRPLPEKFHGLTNVETRYRQRYVDLVMNSE 163

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
           +   + KR +I+   R  +  + F E  TP++   +    AR F           + L  
Sbjct: 164 VMDTMKKRFQIVRFFRKYLEEKGFTEVETPMMHPIAGGATARPFTTHHNALDMELF-LRV 222

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF++ F+I   FR+E       P EF  +++  ++ +  D++N  E++
Sbjct: 223 APELYLKRLLVGGFEKVFEINRSFRNEGISIKHNP-EFTMMELYQAYADYVDMMNITEDL 281

Query: 257 L 257
           +
Sbjct: 282 I 282


>gi|147798996|emb|CAN72569.1| hypothetical protein VITISV_036995 [Vitis vinifera]
          Length = 601

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/267 (20%), Positives = 116/267 (43%), Gaps = 8/267 (2%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           +V ++G +   R  G + F  +RD  G  Q+    +    E  + +++  V   D L +S
Sbjct: 134 YVSIAGRIVARRAFGKLAFFTLRDDSGTIQLYCEKERLLNEQFEQLKT-LVDIGDILGVS 192

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
            S +        G++ +       L+ +  LPLP           R++ R++D+  +   
Sbjct: 193 GSIKRTE----KGELSVYVNSFAXLTKSL-LPLPDKYHGLTDVDKRYRQRYVDMIANPEV 247

Query: 140 KNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
            +I  KR +I++++R  + +  F+E  TP+L  ++        V    + G    L  A 
Sbjct: 248 ADIFRKRAKIVSAIRRTVESSGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIAT 307

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + ++  GF++ +++   FR+E   +   P EF  ++M  ++ + + ++N  E ++ 
Sbjct: 308 ELHLKRMLVGGFEKVYEMGRIFRNEGISTRHNP-EFTTIEMYEAYSDYESMMNMAEEIVT 366

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRR 285
                     T+      IC +   RR
Sbjct: 367 QCALAVCGKLTIDYQGTEICLERPWRR 393



 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  G+DR+VMLL  + ++R+V  FP+
Sbjct: 560 ALEYGMPPASGMGLGVDRLVMLLTNSASIRDVIAFPV 596


>gi|115388583|ref|XP_001211797.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114195881|gb|EAU37581.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 419

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 8/142 (5%)

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-AR 178
           YP  ++F      L   T    I  R+ II  +R   +  +F+E +TPI+ + +    AR
Sbjct: 72  YPRHVQF------LADQTTADIIRARSAIIQYLRQFFLDRSFMEVNTPIVASIAGGAIAR 125

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F   +        +L  AP+ + + L+  GFDR F+I P FR+E       P EF   +
Sbjct: 126 PFYTAATEFPERQLSLRIAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP-EFTTCE 184

Query: 239 MEMSFVEQDDILNTMENVLRGV 260
              ++   +D+++  E +L G+
Sbjct: 185 FYHAYANLEDLMSITETLLSGM 206


>gi|229815818|ref|ZP_04446142.1| hypothetical protein COLINT_02867 [Collinsella intestinalis DSM
           13280]
 gi|229808513|gb|EEP44291.1| hypothetical protein COLINT_02867 [Collinsella intestinalis DSM
           13280]
          Length = 467

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 124/311 (39%), Gaps = 56/311 (18%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACF--EIAKSVRSEWVLCI 73
           G  V ++GWV  VR      F+ + D   +   QVV N ++     EIA    S  ++C 
Sbjct: 18  GQQVTVAGWVKSVRDMKNFGFVTLNDGSCFKDLQVVMNREALANYDEIAHQNVSAALICT 77

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             L ++  A            EL+A +I +  V+     P+  +R   E +R +     L
Sbjct: 78  GELKLTPDAPQ--------PFELAATEIAVEGVSAP-DYPLQKKRATVEFLRTQQH---L 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGS- 190
           R  T     V R R + +       ++  F+  +TPI+TAS  EGA +    + ++  + 
Sbjct: 126 RPRTNLFRAVFRVRSVAAAAIHRFFQDRGFVYVNTPIITASDCEGAGEMFHVTTIDPANP 185

Query: 191 -------------FYALPQAPQQYKQLL---MASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+    +     QL     A  F   +   P FR E+  + R   EF
Sbjct: 186 PLDDKGNVDFSQDFFGTTASLTVSGQLNAENFAMAFGDVYTFGPTFRAENSNTTRHAAEF 245

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNN 273
           + ++ E++F +  D ++  E++L+ V  +  +                      +  +++
Sbjct: 246 WMIEPEIAFADLADDMDLAEDMLKYVIRDVMDRCPDELAMLNKFVDKGLIERLTHVANSD 305

Query: 274 FLRICYDDAIR 284
           F R+ Y DA++
Sbjct: 306 FARVTYTDAVK 316



 Score = 38.1 bits (87), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    EV+ +  + +G+  E  +  +  L R   C    H G   G +R+VM 
Sbjct: 390 EIIGGSQREERLEVLERRIAELGMDPEQYK-YYLDLRRYGTC---KHAGFGLGFERLVMY 445

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V   P +   CD 
Sbjct: 446 LTGVGNIRDVLPHPRTVGSCDF 467


>gi|170694747|ref|ZP_02885898.1| lysyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170140378|gb|EDT08555.1| lysyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 508

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 128/306 (41%), Gaps = 28/306 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  +RD  G  Q    P     E   + + +W +    +V +R
Sbjct: 68  VAIAGRMMLKRVMGKASFATVRDGSGQIQFFITPADVGQETYDAFK-KWDMG--DIVAAR 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-RRDTL 138
                     T + ELS +  E+  +++ L PLP        + ++++ R++DL      
Sbjct: 125 -----GVLFRTNKGELSVRCTELRLLSKSLRPLPDKFHGLSDQEMKYRQRYVDLIVTPET 179

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            K  V RTR I+S+R  M    F+E  TP+L        A+ F           + L  A
Sbjct: 180 RKTFVARTRAISSIRKFMADAGFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMF-LRIA 238

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +   +++  E ++
Sbjct: 239 PELYLKRLVVGGFERVFEVNRNFRNEGV-SVRHNPEFTMIEFYAAYTDYKWVMDFTEQLI 297

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           R    +     T++           F R+    AI++Y    P   N  +  +    F+ 
Sbjct: 298 RQAAIDALGTATITYQGRELDLAKPFHRLTITQAIQKYA---PQYTNEQLADSA---FLR 351

Query: 309 SEFRVF 314
           +E + F
Sbjct: 352 TELKKF 357



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR+VM+L  + ++R+V LFP
Sbjct: 466 RALEYGMPPAGGCGIGIDRLVMMLTDSPSIRDVILFP 502


>gi|127512828|ref|YP_001094025.1| asparaginyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166231675|sp|A3QE68|SYN_SHELP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|126638123|gb|ABO23766.1| asparaginyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 466

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 105/282 (37%), Gaps = 50/282 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           VGS V + GWV   R    GI FL + D             +CF+  + V          
Sbjct: 16  VGSQVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPIQGVVPNSLDNYND 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + E + +       E+   K+E+    E+    P+  +R   E +R 
Sbjct: 64  EILRLTAGCSVVMTGELVESPGKGQAFEMQVTKVEVTGWVEDPDTYPMAAKRHSIEHLR- 122

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  + +++      E FI  STP++TAS  EGA +     
Sbjct: 123 --ELAHLRPRTNIIGAVARVRNCLSHAIHNFYNEEGFIWVSTPLITASDCEGAGEMF--- 177

Query: 185 RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDED 224
           RV+      LP+                       Q      A    + +   P FR E+
Sbjct: 178 RVSTLDLENLPRTDDGKVDFSEDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
             + R   EF+ ++ E++F + +D+    E +L+  F    N
Sbjct: 238 SNTSRHLAEFWMVEPEVAFADLNDVAGLAERMLKYCFRAVLN 279



 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 9/83 (10%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIAAGIDRIVM 548
           EI  G  R    +V+      +G+SKE         YR  +  G  PH G   G +R+V 
Sbjct: 389 EIIGGAQREERLDVLDTRLDEMGLSKEDY-----WWYRDLRRYGTVPHSGFGLGFERLVS 443

Query: 549 LLLGAKNVREVSLF---PMSQNF 568
            + G  N+R+V  F   P S NF
Sbjct: 444 YVTGVSNIRDVIPFPRAPKSANF 466


>gi|149235766|ref|XP_001523761.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452740|gb|EDK46996.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 470

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 120/306 (39%), Gaps = 51/306 (16%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-----VVANPDSACFEIAKSVR 66
           L  S+ G  +   G+V  VR    I FLD+ D  G T      V    +     + ++V 
Sbjct: 32  LAKSEPGELIEARGFVKSVRKSKNIGFLDLAD--GTTSEDLKVVFQTKEQPKLRVGQTV- 88

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                 ++G       +     +     E       I  V E+ PL     ++   S++F
Sbjct: 89  -----AVNGEWAESKGKGQTRELRCNPQEPQHSYRIIGDVEEDYPL-----QKKSTSMQF 138

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMI----AENFIECSTPILTASSPEGA-RDFL 181
                 L+  T    I    R+ + +  +MI      +F + + PI+T+S  EGA   F 
Sbjct: 139 LRTLPALKHRT--STIASFYRLRSFLETQMIDFFNINDFTKVTPPIITSSDCEGAGETFK 196

Query: 182 VPSRVN--QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +    N  + + Y         + L MA   +R + + PCFR E+  + R   EF+ L+ 
Sbjct: 197 IAESANFFEKTTYLTVSTQLHIEALAMA--LNRVWTLTPCFRAENSNTTRHLCEFWMLEA 254

Query: 240 EMSFVEQ-DDILNTMENV---------------LRGVF--EEFSNGN----TVSNNFLRI 277
           E+S VE  + +LN  E++               LRGV+  EE         T    + R+
Sbjct: 255 EISHVEDLEQLLNFTEDMIKYSTRKLIDLKKEYLRGVYLEEELVQSRWAAITKQEKWPRM 314

Query: 278 CYDDAI 283
            Y DAI
Sbjct: 315 TYTDAI 320



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 5/89 (5%)

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           YDL+   F E+A G +R H  E ++++    G+  +V E  +    R  + G  PHGG  
Sbjct: 384 YDLLFPDFGELAGGSLREHNYEELVESMGKHGM--DVEEMDWYTTLR--KNGTIPHGGFG 439

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G +R V  L G  NV++V  FP +   C
Sbjct: 440 MGWERFVTYLSGHDNVKDVIPFPRAPGLC 468


>gi|315657872|ref|ZP_07910752.1| lysine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315491669|gb|EFU81280.1| lysine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 521

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 21/235 (8%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEWVLC-- 72
           +   FV L+G V  +R  G + F  +++  G T Q++ +      E   + ++E  L   
Sbjct: 74  ETAEFVGLAGRVRLMRSSGKLAFATLQEGNGSTIQIMISEREVGPESMSAYKAEVDLGDH 133

Query: 73  --IDGLVMSRSAETINANIITGQIELSA----QKIEILSVAEELPLPVFGEREYPESIRF 126
             + G V+S     ++  + + Q+   A     K  I    EE+ L         E +R 
Sbjct: 134 LFVHGRVISSKRGELSIFVDSWQLTCKALRPLPKSYINEAGEEVSLS--------EDMRV 185

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R LD+      +++V+ R+R++ ++R  +   ++IE  TP+L T      AR F+   
Sbjct: 186 RRRDLDMIMRPAARDMVRNRSRVVQTLRRYLDEHDYIEVETPMLQTLHGGAAARPFVTHM 245

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  Y L  AP+ + +  +  G D+ F+I   FR+E   S   P EF  L++
Sbjct: 246 NAYDTELY-LRIAPELFLKRCLIGGIDKVFEINRNFRNEGADSSHSP-EFTMLEV 298



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 13/92 (14%)

Query: 481 QYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           ++DL+  GFE+A+G          R    +  L A +    + EV E+       + + G
Sbjct: 431 KWDLIIRGFEVATGYSELNDPVVQRARFEQQALDAANGDPEAMEVDED----FLISMEQG 486

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           MPP GG+  G+DR++M L G+  +RE   FP+
Sbjct: 487 MPPAGGMGMGLDRLLMTLTGS-GIRETITFPL 517


>gi|71022075|ref|XP_761268.1| hypothetical protein UM05121.1 [Ustilago maydis 521]
 gi|46097762|gb|EAK82995.1| hypothetical protein UM05121.1 [Ustilago maydis 521]
          Length = 947

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 112/248 (45%), Gaps = 13/248 (5%)

Query: 21  VRLSGWVHRVRPHGGII-FLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLCIDG 75
           V ++G +H +R  G  + F D+       QV A    + D   F I + +R   V+ + G
Sbjct: 473 VSIAGRLHNMRSSGQKLRFYDLHGEGVKVQVTAQLQDHTDGDFFAIHELLRRGDVVGVTG 532

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +        ++  I    I+L +  +++L  A +     F + E     R + R+LDL  
Sbjct: 533 VPGKTKKGELS--IFPSSIKLLSPSLKMLPKASQGDKGGFTDTEQ----RHRKRYLDLIM 586

Query: 136 DTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           +   ++I VKR +IIN +R  +    F+E  TP++   +        V    +      +
Sbjct: 587 NNHVRDIFVKRAKIINYVRRFLDNLGFLEVETPMMNQIAGGATAKPFVTYHNDLKLDLFM 646

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ + + L+  G DR ++I   FR+E       P EF   +  M++ +  D+++  E
Sbjct: 647 RIAPELFLKELVVGGLDRVYEIGRVFRNESIDQTHNP-EFSICEFYMAYADMYDLMDITE 705

Query: 255 NVLRGVFE 262
           +++ G+ +
Sbjct: 706 SMISGLVK 713



 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + G+PP GG   GIDR+VM L  + +++EV  FP ++
Sbjct: 889 ALEHGLPPTGGWGLGIDRLVMFLTDSNSIKEVLAFPANK 927


>gi|315654229|ref|ZP_07907137.1| lysine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315491264|gb|EFU80881.1| lysine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 521

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 21/235 (8%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEWVLC-- 72
           +   FV L+G V  +R  G + F  +++  G T Q++ +      E   + ++E  L   
Sbjct: 74  ETAEFVGLAGRVRLMRSSGKLAFATLQEGNGSTIQIMISEREVGPESMSAYKAEVDLGDH 133

Query: 73  --IDGLVMSRSAETINANIITGQIELSA----QKIEILSVAEELPLPVFGEREYPESIRF 126
             + G V+S     ++  + + Q+   A     K  I    EE+ L         E +R 
Sbjct: 134 LFVHGRVISSKRGELSIFVDSWQLTCKALRPLPKSYINEAGEEVSLS--------EDMRV 185

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R LD+      +++V+ R+R++ ++R  +   ++IE  TP+L T      AR F+   
Sbjct: 186 RRRDLDMIMRPAARDMVRNRSRVVQTLRRYLDEHDYIEVETPMLQTLHGGAAARPFVTHM 245

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  Y L  AP+ + +  +  G D+ F+I   FR+E   S   P EF  L++
Sbjct: 246 NAYDTELY-LRIAPELFLKRCLIGGIDKVFEINRNFRNEGADSSHSP-EFTMLEV 298



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 13/92 (14%)

Query: 481 QYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           ++DL+  GFE+A+G          R    +  L A +    + EV E+       + + G
Sbjct: 431 KWDLIIRGFEVATGYSELNDPVVQRARFEQQALDAANGDPEAMEVDED----FLISMEQG 486

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           MPP GG+  G+DR++M L GA  +RE   FP+
Sbjct: 487 MPPAGGMGMGLDRLLMTLTGA-GIRETITFPL 517


>gi|253743723|gb|EET00046.1| Lysyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 576

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 2/136 (1%)

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFL 181
           + RF+ R+LD   +   + IV+R+ IIN +R  MI +  ++E  TP+L       A    
Sbjct: 214 NTRFRQRYLDFIINNTGQKIVQRSGIINFIRRFMIDQRKYLEVETPMLQTIHGGAAAQPF 273

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           V    + G    L  AP+ + + L+  G +R F+I   FR+E       P EF  ++   
Sbjct: 274 VCKSNDLGHDVYLRIAPELFLKRLVVGGLNRVFEINKNFRNESSDQTHSP-EFTMMEAYS 332

Query: 242 SFVEQDDILNTMENVL 257
           ++ + +D+ + +E+++
Sbjct: 333 AYDDLEDMCDLIEDLV 348



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +    G+PP GGI  GIDR+VMLL  +  +REV  FP+
Sbjct: 533 KCLDYGLPPTGGIGVGIDRLVMLLTNSSTIREVIAFPL 570


>gi|218888077|ref|YP_002437398.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218759031|gb|ACL09930.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 501

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 19/219 (8%)

Query: 91  TGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRI 148
           TG++ LS  +  +L+ +   LP    G ++     R++ R++DL      + I  KRT I
Sbjct: 129 TGELTLSCDQCILLTKSIRPLPEKYHGLKDV--ETRYRQRYVDLIVTPRTREIFRKRTLI 186

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGAR--DFLVPSRVNQGSFYALPQAPQQYKQLLM 206
           +   R  +  + F+E  TP++    P GA    F+          Y +  AP+ Y + L+
Sbjct: 187 VREFRRFLEDKGFMEVETPMM-QPIPGGATAMPFITHHNALDMQLY-MRIAPELYLKRLL 244

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
             GF++ F+I   FR+E   +   P EF   +   ++   +D+++  E +   V E+   
Sbjct: 245 VGGFEKVFEINRNFRNEGISTRHNP-EFTMCEFYWAYATFEDLMDLTEQLFAHVAEKVCG 303

Query: 267 GNTVS----------NNFLRICYDDAIRRYGTDKPDLRN 295
              V+            + R+ + D++ + G  KP+  N
Sbjct: 304 SYVVTYQGQEVDLTPGRWTRLSFHDSLEKIGGHKPEFYN 342



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G   GIDR+VMLL  + ++REV LFP+
Sbjct: 459 RALEYGMPPAAGEGVGIDRLVMLLTDSPSIREVILFPL 496


>gi|29840596|ref|NP_829702.1| lysyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301684|sp|Q821U6|SYK_CHLCV RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|29834946|gb|AAP05580.1| lysyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 525

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 19/198 (9%)

Query: 122 ESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           + IR++ R+LDL   D + +   KR+RII  +R  M A+ F+E  TPIL        A  
Sbjct: 170 KEIRYRKRWLDLISSDEVRQTFFKRSRIIKLIRQYMDAQGFMEVETPILQNIYGGAEATP 229

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          +         K++L+  G  R ++I   FR+E       P EF  ++ 
Sbjct: 230 FVTTLNALHSEVFLRISLEIALKKILVG-GTSRVYEIGKVFRNEGIDRTHNP-EFTMIEA 287

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------------SNNFLRICYDDAIR 284
             + V+   ++  +EN++  +    ++G+TV                  ++R+   D+I+
Sbjct: 288 YAANVDYHSVMTYVENLVEYLVCALNDGSTVLTYSHLKQGPQTVDFKAPWIRMTMKDSIK 347

Query: 285 RYGTDKPDLRNPIIMHNV 302
            YG    DL     + N+
Sbjct: 348 TYGDVDVDLHADHELRNI 365



 Score = 43.9 bits (102), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 23/32 (71%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP GG   GIDR+VM+L  A ++R+V  FP
Sbjct: 484 GMPPAGGFGIGIDRLVMILTDAASIRDVLYFP 515


>gi|310791083|gb|EFQ26612.1| aspartyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 584

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 5/124 (4%)

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
           A+ F++   P L  ++ EG  +       ++ +   L Q+PQ YKQ  +A G  R + I 
Sbjct: 286 AQGFVQFEPPCLIGAASEGGANVFQLPYFDKSA--CLAQSPQFYKQFEIAGGRKRVYCIG 343

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQD--DILNTMENVLRGVFEEFSNGNTVSNNFL 275
           P FR E+  + R   EF  LD+EM  +E D  ++ + +E VL  +F         + + +
Sbjct: 344 PVFRAENSNTPRHMTEFTGLDLEME-IEDDYHEVQDMLEKVLLHIFRGLKERCADAIDTV 402

Query: 276 RICY 279
           R  Y
Sbjct: 403 RAVY 406



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 13/90 (14%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS------KEVVENRFGGLYRAFQCGMPP 535
           YD    G EI SGG R H+  V+       GI       KE V+     ++R+   G+PP
Sbjct: 496 YDFFMRGQEILSGGQRIHIPSVLEARLRKKGIDPNSQGIKEYVD-----VFRS--AGVPP 548

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           HGG   G+DR+V   L   +V   S +P +
Sbjct: 549 HGGGGIGLDRVVAWFLNLPSVHLASYYPRT 578


>gi|15644811|ref|NP_206981.1| lysyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2501017|sp|P56126|SYK_HELPY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|2313270|gb|AAD07251.1| lysyl-tRNA synthetase (lysS) [Helicobacter pylori 26695]
          Length = 501

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ + D   I QV  + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKVEDESTILQVYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSIHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFEMEGFLEVETPMMHPI-PGGANARPFITYHNALEVERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|237737416|ref|ZP_04567897.1| asparaginyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421278|gb|EEO36325.1| asparaginyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 463

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 124/305 (40%), Gaps = 53/305 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDG-LV 77
           V ++GWV ++R      F+++ D   +   QVV +   + FE    +     + + G LV
Sbjct: 21  VIINGWVKKIRDQKNFGFIEVNDGSFFKGVQVVFDTRLSNFEEISRLSIISSIEVKGKLV 80

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            S+ A         GQ  E+ A++I +   A+ L  P+  +R   E +R K   L  R +
Sbjct: 81  KSQGA---------GQAFEIMAEEINVFQKAD-LEYPLQNKRHTFEYLRTKAH-LRPRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRV- 186
           T       R+ +  ++        F+   TPI+T S  EGA +           +P +  
Sbjct: 130 TFSAVFRVRSVVAYAIHKFFQENGFVYVHTPIITGSDCEGAGEMFRVTTLDLNNLPKKED 189

Query: 187 ----NQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               N   F+          QL      S F   +   P FR E+  + R   EF+ ++ 
Sbjct: 190 GTVDNSKDFFGKETNLTVSGQLSGETFCSAFRNIYTFGPTFRAENSNTARHASEFWMIEP 249

Query: 240 EMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRIC 278
           E++F + +  +   E++++ + +          EF N            N ++++F R+ 
Sbjct: 250 EIAFADLEANMELAESMVKYIIKFVMDECPEEMEFFNNFIEKGLFDKLNNVLNSDFGRLT 309

Query: 279 YDDAI 283
           Y +AI
Sbjct: 310 YTEAI 314



 Score = 42.0 bits (97), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 15/91 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  EI  G  R    E++    + +G+  E  E      RFG           PH
Sbjct: 378 DLLAPGIGEIIGGSQREDSLEILENRITELGMKPEDYEFYLDLRRFGSF---------PH 428

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +RI+M + G  N+R+V  FP + N
Sbjct: 429 SGYGLGFERIIMYITGMTNIRDVIPFPRTPN 459


>gi|226355353|ref|YP_002785093.1| lysyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226317343|gb|ACO45339.1| putative lysine--tRNA ligase (lysyl-tRNA synthetase) [Deinococcus
           deserti VCD115]
          Length = 514

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 112/266 (42%), Gaps = 15/266 (5%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           L+G V  +R  G   F D++D +G  Q+  +  D+  F+  K +    ++ + G      
Sbjct: 75  LAGRVTLMRHMGKAAFADLQDEHGSLQLHFSRQDTENFDPTKKIDLGDIIGVRGFPFVTK 134

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                    TGQ+ L     + L V    P+P        E +R + R+LDL  +   + 
Sbjct: 135 ---------TGQLTLRVTSWQPL-VKSLHPMPSKFHGLQDEELRARRRYLDLMINPERRE 184

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             + R+R I  +R  + +  F+E   P L   +    A+ F          F +L  + +
Sbjct: 185 AFRTRSRAIRYIRNFLDSREFMEVEGPTLQVVAGGTEAKPFTTHHNALSHDF-SLRISLE 243

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R ++I   +R+E       P EF  L+   ++ + +D++  +E +L G
Sbjct: 244 LYLKRLLVGGFERVYEIGRNYRNEGIDRTHNP-EFTMLEAYFAYGDYNDMMQLVEEMLHG 302

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRR 285
           +  E      +S     + +    RR
Sbjct: 303 LVTEVKGEPKLSYQGQTVDFSLPFRR 328



 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  G+DR+ MLL  + ++R+V LFP+
Sbjct: 463 ALEYGMPPAAGMGMGMDRLAMLLTDSDSIRDVLLFPL 499


>gi|218128465|ref|ZP_03457269.1| hypothetical protein BACEGG_00035 [Bacteroides eggerthii DSM 20697]
 gi|317475709|ref|ZP_07934969.1| asparaginyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|217989356|gb|EEC55669.1| hypothetical protein BACEGG_00035 [Bacteroides eggerthii DSM 20697]
 gi|316908165|gb|EFV29859.1| asparaginyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 467

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 111/277 (40%), Gaps = 36/277 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F  E+ 
Sbjct: 6   RTKIVDLLKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLANFDEEML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREY 120
           K + +   L ++G+        +  ++ +GQ  E+ A++IE+L   +   PL   G    
Sbjct: 66  KDITTGACLSVNGV--------LTESVGSGQKAEIQAREIEVLGTCDNTYPLQKKGH--- 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGAR 178
             S+ F      LR  T     V R R  +  ++      + F    TPI+T S  EGA 
Sbjct: 115 --SMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHEFFHKKGFFYFHTPIITGSDCEGAG 172

Query: 179 DFLVPSRVN--------QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221
                + +N         GS      F+    +     QL   L A+     +   P FR
Sbjct: 173 QMFQVTTMNLYDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            E+  + R   EF+ ++ E++F +  D ++  E  ++
Sbjct: 233 AENSNTPRHLAEFWMVEPEVAFNDITDNMDLAEEFIK 269


>gi|219110245|ref|XP_002176874.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411409|gb|EEC51337.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 485

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 118/269 (43%), Gaps = 19/269 (7%)

Query: 6   THSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH+  DL          G  D  + V ++G +   R  G + F  ++D  G+ Q+  +  
Sbjct: 16  THTSADLNKLYEHKLENGEEDESANVSVAGRIMTRRVFGKLAFFTMQDEMGMIQLQFD-K 74

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               +  K+++ +W    DG  +     TI      G++ + A + ++L+ +  LPLP  
Sbjct: 75  GRLGDTFKNLK-DWT---DGSDIIGVRGTIR-RTDKGELTVFATEWKMLTKSI-LPLPDK 128

Query: 116 GEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                  + R++ R LD+  +  + +   KR  I + +R  +  + F+E  TP L   S 
Sbjct: 129 YHGLQDVTKRYRSRHLDMISNPGVRETFRKRALITSKLRRMLDDKGFLEIETPTLHTQSG 188

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                       +      L  A + + + L+  GFDR +++   FR+E   +   P EF
Sbjct: 189 GAEAKPFETYHNSMDMQLTLRIATELHLKRLIVGGFDRVYEVGRIFRNEGISTRHNP-EF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEE 263
             +++  ++ + DD++N  E ++  + EE
Sbjct: 248 TSVELYQAYADYDDMMNLTEELVCTIAEE 276



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 441 QALEQGMPPTGGLGIGIDRLVMLLTNSPSIRDVIAFPL 478


>gi|145357295|ref|XP_001422855.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144583099|gb|ABP01214.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 448

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 123/320 (38%), Gaps = 66/320 (20%)

Query: 36  IIFLDIRDHYGIT--QVVANPDSACFEI--AKSVRSEWVLCIDGLVMSRSAETINANIIT 91
           + F+D+ D   I+  Q V N  SA ++   A  V +   L + G +++       A    
Sbjct: 1   MAFIDLNDGSAISGMQAVVNEGSAAWDALDAGGVSTGAALRVKGKLVASPGGKQAA---- 56

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
              EL+ ++I+++  A+    P+  +R   E +R     L  R +T+      R ++  +
Sbjct: 57  ---ELAVEEIDVIGTADPETYPLQKKRHTLEYLR-SIAHLRPRTNTIGAVARVRNQLAYA 112

Query: 152 MRCRMIAENFIECSTPILTASSPEGA-RDFLVPSRVN----------------------Q 188
                    F+  +TPI+TAS  EGA   F V + +N                       
Sbjct: 113 THTFFQEHGFLYANTPIITASDCEGAGEQFQVTTLLNGFGAGEWTTPASVVDEQEAMNKD 172

Query: 189 GS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           GS      F+  P       QL   +MA   +  +   P FR E+  + R   EF+ ++ 
Sbjct: 173 GSIDYSQDFFGKPSYLTVSGQLNGEIMACAVNDIYTFGPTFRAENSNTSRHLAEFWMVEP 232

Query: 240 EMSFVEQDDILNTMENVLR----GVFE------EFSNGNTVSNN------------FLRI 277
           E++F + +D ++  E  L+     V E      EF   N   +N            F RI
Sbjct: 233 ELAFADLNDDMDCAEAYLKYCLNHVLEHCDEDLEFFEKNISKDNLRERLRNVASQEFARI 292

Query: 278 CYDDAIRRYGTDKPDLRNPI 297
            Y +A+      K     PI
Sbjct: 293 TYTEAVEHVLNAKKKFEFPI 312


>gi|317051523|ref|YP_004112639.1| lysyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946607|gb|ADU66083.1| lysyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 498

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 108/254 (42%), Gaps = 17/254 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPD--SACFEIAKSVRSEWVLCIDGLVMS 79
           ++G +  +R  G   F+ +RD  G  Q  VA  D  S  F   K +    ++ + G    
Sbjct: 65  IAGRIMALRSFGKAAFVKLRDRTGSVQAYVARDDIGSDAFGQFKKIEVGDIIEVCGFPFR 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTL 138
              + ++ +  T ++ + A +          PLP            ++ R++DL   +  
Sbjct: 125 TKTDELSLHATTCRLLVKAVR----------PLPEKWHGLKDRETCYRQRYVDLMVNEES 174

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQA 197
            +  + R RI+  +R    A +++E  TP++        A+ F+          Y L  A
Sbjct: 175 RERFLMRGRIVKFIRDYFTARDYLEVETPMMHPLLGGAAAKPFVTHHNTLDMDLY-LRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GFDR F+I   FR+E       P EF  ++   ++    D+++  E++L
Sbjct: 234 PELYLKRLVVGGFDRVFEINRNFRNEGISPKHNP-EFTMIEWYQAYATYHDLMDLTEDML 292

Query: 258 RGVFEEFSNGNTVS 271
             +  +    +T++
Sbjct: 293 CTMARQLLGSDTIT 306



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           +CNGF   +  +  +  E  L+         E   +      RA + G+PP  G   GID
Sbjct: 415 LCNGFTELNDPVDQY--ERFLKQVEAKQSGDEEATDMDLDYIRALEYGLPPTAGEGMGID 472

Query: 545 RIVMLLLGAKNVREVSLFP 563
           R+VML+  A+ +R+V LFP
Sbjct: 473 RLVMLMTNAQTIRDVILFP 491


>gi|158523174|ref|YP_001531044.1| tRNA synthetase class II (D K and N) [Desulfococcus oleovorans
           Hxd3]
 gi|158512000|gb|ABW68967.1| tRNA synthetase class II (D K and N) [Desulfococcus oleovorans
           Hxd3]
          Length = 301

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 8/135 (5%)

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALP 195
           + H ++  R  +IN++R   +  +++E  TP+ L +  PE   D +          + L 
Sbjct: 2   SFHHHLKTRALVINAVRRFFLDRDYLEVDTPVRLPSLLPEAHIDPVA------SETWFLQ 55

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+Q  + L+++G  R FQI   FR  +     LP EF  L+   +  +  D++   E 
Sbjct: 56  TSPEQCMKRLLSAGHQRIFQICKTFRKAERGKKHLP-EFSMLEWYRAGADYFDLMAETEA 114

Query: 256 VLRGVFEEFSNGNTV 270
           ++R V E+   GN++
Sbjct: 115 LVRFVAEQLGTGNSL 129


>gi|54022067|ref|YP_116309.1| lysyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|54013575|dbj|BAD54945.1| putative lysyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 1061

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 103/221 (46%), Gaps = 11/221 (4%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      S  G+ VR+ G + R+R +GG++F  +RD     Q+V + +     +  + 
Sbjct: 607 THTVAAARRSPRGTTVRVCGRLLRIRDYGGVVFALLRDWSDDIQLVIDRE----RVGAAR 662

Query: 66  RSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
            +E+    D G ++  S +   +   +G++ L A    +L      PLP   +       
Sbjct: 663 SAEFGEYFDLGDLIEVSGQIGRSR--SGELSLLAADWRMLGKCLH-PLPDKWKGLADPEA 719

Query: 125 RFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           R + R++D+  +   ++++ KR+ ++ S+R  + +  ++E  TPIL      GA      
Sbjct: 720 RVRQRYVDMAINPETRDVLAKRSAVVRSLRESLNSWGYLEVETPILQQVH-GGANATPFT 778

Query: 184 SRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           + +N       L  AP+ Y + L   G ++ F++   FR+E
Sbjct: 779 THINAYDLDLYLRIAPELYLKRLCVGGMEKVFELGRTFRNE 819



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 13/92 (14%)

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  ++E  + A +    + E+ E+      +A +  
Sbjct: 971  RWDLVAWGVELGTAYSELTDPVEQRRRLTEQSVLAANGDPEAMELDED----FLQALEHA 1026

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            MPP GG+  G+DRIVML+ G +++RE   FP+
Sbjct: 1027 MPPTGGLGMGVDRIVMLITG-RSIRETLPFPL 1057


>gi|187924548|ref|YP_001896190.1| lysyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|238689470|sp|B2SXV7|SYK_BURPP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|187715742|gb|ACD16966.1| lysyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 518

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 129/306 (42%), Gaps = 28/306 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  +RD  G  Q    P     E   + + +W +    +V +R
Sbjct: 78  VAIAGRMMLKRVMGKASFATVRDGSGQIQFFITPTDVGQETYDAFK-KWDMG--DIVAAR 134

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-RRDTL 138
                     T + ELS +  E+  +++ L PLP        + ++++ R++DL      
Sbjct: 135 -----GVLFRTNKGELSVRCTELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVTPET 189

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            K  V RT+ I+S+R  M   +F+E  TP+L        A+ F           + L  A
Sbjct: 190 RKTFVARTKAISSIRKFMAEADFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMF-LRIA 248

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E ++
Sbjct: 249 PELYLKRLVVGGFERVFEINRNFRNEG-VSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLI 307

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           R    +     T++           F R+    AI++Y    P   N  +  +    F+ 
Sbjct: 308 RQAAIDALGTATITYQGRELDLAKPFHRLTITQAIQKYA---PQYTNEQLADSA---FLR 361

Query: 309 SEFRVF 314
           +E + F
Sbjct: 362 TELKKF 367



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      KE  +     +   Y RA + GMPP 
Sbjct: 426 RFELFITGREIANGFSELNDPEDQAARFKKQVDQKEAGDEEAMFYDADYIRALEYGMPPA 485

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VM+L  + ++R+V LFP
Sbjct: 486 GGCGIGIDRLVMMLTDSPSIRDVILFP 512


>gi|302845072|ref|XP_002954075.1| hypothetical protein VOLCADRAFT_76143 [Volvox carteri f.
           nagariensis]
 gi|300260574|gb|EFJ44792.1| hypothetical protein VOLCADRAFT_76143 [Volvox carteri f.
           nagariensis]
          Length = 641

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 115/251 (45%), Gaps = 15/251 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSA--CFEIAKSVRSEW 69
           G  +  + V ++G +   R  G  ++F D++      Q++A+  ++    E   +V +E 
Sbjct: 175 GQQEPETTVSVAGRIFSKRASGSKLLFYDLKADGVKIQIMADARNSDLSLEAFTAVHNE- 233

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFKY 128
             C  G ++    E        G++ +  +K  +LS    +P    FG ++  +  R++ 
Sbjct: 234 --CKRGDIVG--VEGFPGKSKKGELSIFPRKFVLLSPCLHMPPSAHFGLKD--QETRYRQ 287

Query: 129 RFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R+LDL  +T  +NI   R+RII  +R  +    F+E  TP++        AR F+     
Sbjct: 288 RYLDLIVNTDVRNIFYTRSRIIQFVRRFLDTRGFLEVETPMMNMIPGGAAARPFITHHND 347

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  AP+ + ++L+  G +R ++I   FR+E       P EF   +   ++ + 
Sbjct: 348 LDMKLY-MRIAPELFLKMLVIGGLERVYEIGRQFRNEGIDLTHNP-EFTTCEFYQAYADY 405

Query: 247 DDILNTMENVL 257
            D+L   E+++
Sbjct: 406 KDLLGMTESLI 416



 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ MLL    N++EV LFP
Sbjct: 592 ALEYGLPPTGGWGLGIDRMTMLLTDTCNIKEVLLFP 627


>gi|73945457|ref|XP_857814.1| PREDICTED: similar to Asparaginyl-tRNA synthetase, cytoplasmic
           (Asparagine--tRNA ligase) (AsnRS) isoform 2 [Canis
           familiaris]
          Length = 563

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 114/293 (38%), Gaps = 43/293 (14%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D  C             C +G+
Sbjct: 136 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLS-DDLC------------QCYNGV 182

Query: 77  VMSRSAE---------TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V++  +          T       G  ELS    E++ +A           E    ++  
Sbjct: 183 VLATESSVTVYGTLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLN 242

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST-PILTA---SSPEGARDFLVP 183
            R + +R + + K +  R+ +    R       + E S  P   A   +  EG       
Sbjct: 243 NRHMMIRGENMSKILKARSVVTRCFRDHFFDRGYYEVSVYPSSFANVQTQVEGGATLFKL 302

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + +F  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F
Sbjct: 303 DYFGEEAF--LTQSSQLYLETCIPALGD-VFCIAQSYRAEQSRTRRHLAEYTHVEAECPF 359

Query: 244 VEQDDILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAI 283
           +  +++LN +E+++  V +                N       F R+ Y DAI
Sbjct: 360 LTFEELLNRLEDLVCDVVDRVLKSPAGSIVRDLNPNFKPPKRPFKRMNYSDAI 412


>gi|71065613|ref|YP_264340.1| lysyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|123761770|sp|Q4FSV2|SYK_PSYA2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71038598|gb|AAZ18906.1| lysyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 514

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 15/175 (8%)

Query: 125 RFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFL 181
           R++ R LDL   +T     + R+++I+ +R  M+ E F+E  TP++    P GA  R F+
Sbjct: 172 RYRNRHLDLMTNETTRDTFMVRSQVISGIRKFMLNERFMEVETPMM-HPIPGGAVARPFV 230

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  ++   
Sbjct: 231 THHNALDMPLY-LRIAPELYLKRLVVGGFEKVFEINRSFRNEGVSTRHNP-EFTMIEFYQ 288

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           ++ +  D+++  E +   +  +      ++           F R+   +AI +Y 
Sbjct: 289 AYADYHDLMDLTERLFNELATDILGTTEITYQEEDISLKAPFERLSMSNAIAKYA 343



 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   G+PP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 471 ALSYGLPPTAGEGIGIDRLVMLLTDSASIRDVILFP 506


>gi|256026724|ref|ZP_05440558.1| lysyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289764720|ref|ZP_06524098.1| lysyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289716275|gb|EFD80287.1| lysyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 258

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLCIDGLV 77
           + +G +  +R  G   F  I D  G  Q+    D    E    I K +    ++ I+G +
Sbjct: 40  KTAGRIMSLRGKGKAYFAHIEDQSGKIQIYMKKDELGEEQFDHIVKMLNVGDIVGIEGEL 99

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                E +   + +  I L A+ +        LP    G  +    IR++ R++DL  + 
Sbjct: 100 FITHTEELTLRVKS--ISLLAKNVR------SLPEKYHGLTDV--EIRYRKRYIDLIMNP 149

Query: 138 LHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
             ++I +KRT II  +R  +    F+E  TP++        AR F+          Y L 
Sbjct: 150 EVRDIFIKRTEIIKEIRKYLDERGFLEVETPMMHQILGGAAARPFITHHNALNLDLY-LR 208

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            A + Y + L+  GFD+ +++   FR+E
Sbjct: 209 IAVELYLKRLIVGGFDKVYEMGKDFRNE 236


>gi|33519875|ref|NP_878707.1| asparaginyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|59798582|sp|Q7VR09|SYN_BLOFL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|33504220|emb|CAD83483.1| asparaginyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 470

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 110/272 (40%), Gaps = 44/272 (16%)

Query: 21  VRLSGWVHRVRPHGG--IIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGL 76
           + L GW+ R R H    I FL++ D   +   Q+V   +   +E             D L
Sbjct: 21  ITLYGWI-RTRRHSKTKITFLNLYDGSCLESLQIVVKNNLHNYET------------DIL 67

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----ESIRFKYRFL 131
            ++     I    IT  +  + Q+IE+++   ++   +     YP      S+ +     
Sbjct: 68  KLTTGCSIIAKGYITNSLG-TKQRIELIATYIQVLGWIDNPSTYPITTKKHSMEYLRNVA 126

Query: 132 DLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQ 188
            LR  T     + R R  +  S+   M  + FI   TPI+TAS  EG ++ F V   +N 
Sbjct: 127 HLRPRTHIFGAISRIRHVLFQSIHNLMNTKGFIWVPTPIITASDTEGNSKMFYVSELLNN 186

Query: 189 G--------SFYALPQAPQQYKQLLMASG----------FDRYFQIAPCFRDEDPRSDRL 230
                    S   +P+     +  L  SG            + +   P FR E   ++R 
Sbjct: 187 SKKSQNICNSHQKIPELFFGKEAFLTVSGQLNVESYACALTKVYTFGPTFRAEHSNTNRH 246

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             EF+ L+ EM+F + + I+   +++L+ + +
Sbjct: 247 LAEFWMLEPEMAFTDLNIIIKIADSLLKDIVQ 278


>gi|223041478|ref|ZP_03611681.1| asparaginyl-tRNA synthetase [Actinobacillus minor 202]
 gi|223017736|gb|EEF16143.1| asparaginyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 467

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 134/333 (40%), Gaps = 65/333 (19%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D   +   Q + N D A
Sbjct: 1   MSKFPTISEILSGKVAVGEEVSVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDLA 60

Query: 58  CF--EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLP 113
            +  E+ + + +   + + G+++   AE        GQ +EL A+ +E++   E+    P
Sbjct: 61  NYQDEVLR-LTAGCSVIVTGVIVESPAE--------GQAVELQAKSVEVVGWVEDPDTYP 111

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTA 171
           +  +R    SI +      LR  T     V R R  +  ++      + F   +TP++TA
Sbjct: 112 MAAKRH---SIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITA 168

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQA-------PQQY---KQLLMASG----------FD 211
           S  EGA +     RV+      LP+         Q +   +  L  SG            
Sbjct: 169 SDTEGAGEMF---RVSTLDLENLPRGEDGKVDFSQDFFGKESFLTVSGQLNGETYACALS 225

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL----RGVFEEFSNG 267
           + +   P FR E+  + R   EF+ ++ E +F    D     E++L    R V EE  + 
Sbjct: 226 KVYTFGPTFRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFRAVLEERKDD 285

Query: 268 -----------------NTVSNNFLRICYDDAI 283
                            N ++++F +I Y DAI
Sbjct: 286 LKFFEKHVDNTVISRLENFINSDFAQIDYTDAI 318


>gi|2501025|sp|Q43776|SYK_SOLLC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1147585|emb|CAA64223.1| Lysyl-tRNA synthetase [Solanum lycopersicum]
          Length = 588

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 73/145 (50%), Gaps = 2/145 (1%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           +  R++ R+LDL  +   + + + R RII+ +R  +    F+E  TP +  ++   +   
Sbjct: 237 QETRYRQRYLDLMMNPEVRALFRTRARIISYIRSFLDNLEFLEVETPSMNLTAGGASARP 296

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +       +   +  +P+ Y + L+  GFDR +++   FR+E       P EF   ++ 
Sbjct: 297 FITHHNELDTELLIRVSPELYLKKLVVGGFDRVYELGKHFRNEGMDLTHSP-EFTMCELY 355

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS 265
           M++ + +D+++  E +L G+ ++ +
Sbjct: 356 MAYADYNDLMDLTEQLLSGMVKDLT 380



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+ MLL  ++NV+EV LFP
Sbjct: 548 ALEYGLPPTGGLGMGIDRLTMLLTDSQNVKEVILFP 583


>gi|237747767|ref|ZP_04578247.1| lysyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229379129|gb|EEO29220.1| lysyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 511

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR+VMLL  + N+R+V LFP
Sbjct: 469 RALEYGMPPAGGCGIGIDRLVMLLTDSPNIRDVILFP 505



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 5/170 (2%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           TG++ +   ++ +++ +   PLP        + ++++ R++DL   +   K    RT  I
Sbjct: 139 TGELSVRVSEVRLITKSVR-PLPDKFHGLSDQELKYRQRYVDLIMSEETRKTFKARTAAI 197

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R  M    F+E  TP+L A      A+ F+          + +  AP+ Y + L+  
Sbjct: 198 ASIRRFMGDNGFMEVETPMLHAIPGGAAAKPFITYHNALDMQMF-MRIAPELYLKRLLVG 256

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           GF+R F++   FR+E   S R   EF  ++   ++V+   +++  E V+R
Sbjct: 257 GFERVFELNRNFRNEGV-SPRHNPEFTMMEFYAAYVDYKWLMDFTETVIR 305


>gi|260597330|ref|YP_003209901.1| asparaginyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260216507|emb|CBA29684.1| Asparaginyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 467

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 111/280 (39%), Gaps = 54/280 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 17  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPIQAVINNSLPNYNE 64

Query: 76  LVMSRSAETINANIITGQI----------ELSAQKIEILS-VAEELPLPVFGEREYPESI 124
            V+  +  T  + I+TG++          EL A ++E+   V +    P+  +R    SI
Sbjct: 65  EVLHLT--TGCSVIVTGKVVESPGEGQSFELQATQVEVTGWVDDPDTYPMAAKRH---SI 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +      LR  T     V R R  +  ++      + F   STP++TAS  EGA +   
Sbjct: 120 EYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFHEQGFFWVSTPLITASDTEGAGEMF- 178

Query: 183 PSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRD 222
             RV+      LP+  Q                    Q      A    + +   P FR 
Sbjct: 179 --RVSTLDLENLPRDDQGKIDFDKDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRA 236

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E+  + R   EF+ L+ E++F   +D+    E +L+ VF+
Sbjct: 237 ENSNTSRHLAEFWMLEPEVAFANLNDVAGLAEAMLKYVFK 276


>gi|126658229|ref|ZP_01729379.1| lysyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126620378|gb|EAZ91097.1| lysyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 573

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 60/309 (19%), Positives = 129/309 (41%), Gaps = 27/309 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCIDGLV 77
           + ++G +   R  G + F +++D  G  Q+  +     S   E+  +      L   G +
Sbjct: 68  IAIAGRIIARRVFGKLAFFNLQDETGTIQLYLDKKEIQSHMSELENAFNHLKKLTDTGDI 127

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
           +             G++ +  ++ +IL+ +  LPLP           R++ R++DL  + 
Sbjct: 128 IGVKGSIKRTE--KGELSVKVKQYQILTKSL-LPLPDKWHGLTDTEKRYRQRYVDLIVNP 184

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALP 195
            + +    R +I  S+R  +  + FIE  TP+L + +    AR F+      +   Y L 
Sbjct: 185 QVRQTFRHRAQITASIRRYLDNQGFIEIETPVLQSEAGGAEARPFITYHNTLEMDLY-LR 243

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + + + L+  GF++ F++   FR+E   +   P EF  +++  ++ + +D++   E 
Sbjct: 244 IATELHLKRLIVGGFEKVFEMGRIFRNEGVSTKHNP-EFTSIEIYQAYADYNDMMELTEA 302

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEHFVHSEFR 312
           ++    +E    + ++              Y  +K D+  P   + MH + +     +F 
Sbjct: 303 IITTAAQEVLGDSKIT--------------YQGEKIDISTPWRRVTMHEIVKEKSGLDFE 348

Query: 313 VFSKILSVN 321
            F    S  
Sbjct: 349 KFKDFESAK 357



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR++MLL  + ++R+V  FP+
Sbjct: 470 ALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIAFPL 506


>gi|326336335|ref|ZP_08202506.1| lysine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325691509|gb|EGD33477.1| lysine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 560

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 123/289 (42%), Gaps = 24/289 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F  ++D  G  Q+    D  C    K++ +E    +  L 
Sbjct: 44  GKEVTVAGRIMSFRIQGKASFATLQDSSGRVQLYFKRDELCPGEDKTLYNEVFKKLLDLG 103

Query: 78  MSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGER-----EYPE-SIRFKYRF 130
                +        G+  +  +  ++L      LPLP    +     E+ +   R++ R+
Sbjct: 104 DFIGVKGTLFTTQMGEKSIDVKHFKVLCKTLRPLPLPKVDAQGKVHDEFNDVEQRYRMRY 163

Query: 131 LDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVN 187
           +DL  +   K + +KR R+ N+MR       +IE  TPIL A  P G  AR F+      
Sbjct: 164 VDLVVNPQVKEVFLKRNRLFNAMREYFNNHGYIEVETPILQA-IPGGASARPFITHHNAL 222

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y +  A + Y + L+  GFD  ++ A  FR+E       P EF  +++ +++ + +
Sbjct: 223 DIPLY-MRIANELYLKRLIVGGFDGVYEFAKNFRNEGMDRTHNP-EFTGMEIYVAYKDYN 280

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN----------NFLRICYDDAIRRY 286
            ++   EN+L    +   NG T +            + R+   +AI+R+
Sbjct: 281 WMMEFTENLLEYCAKAV-NGTTKATFGKHEVDFKAPYPRVTMTEAIKRF 328



 Score = 45.1 bits (105), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQLR 585
           RA + GMPP  G+  G+DR++M L   + ++EV  FP M     ++ +        E L+
Sbjct: 453 RALEYGMPPTSGLGIGMDRLIMFLTNNETIQEVLFFPQMRPERKEVELSDDEKQIFEILK 512

Query: 586 ELGLRIVENPK 596
           + G  ++EN K
Sbjct: 513 KEGKSLLENLK 523


>gi|320582939|gb|EFW97156.1| Mitochondrial lysine-tRNA synthetase [Pichia angusta DL-1]
          Length = 531

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 18/265 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           +L V D   F+ L+G +  +R  G G +FLD+       QVVAN       +     ++W
Sbjct: 70  ELRVIDDAKFI-LNGKIASIRRAGKGSMFLDLVQDGQKVQVVAN--HKMMGLTNGEFADW 126

Query: 70  VLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
                 G  +S +      N  TG++ L A   E L +A     PV      P  + +  
Sbjct: 127 HGQFKPGDYVSCTGHPGTTN--TGELSLKAS--ERLRLAAPALHPVPPAFRDPGKV-YSN 181

Query: 129 RFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA------SSPEGARDFL 181
           R +D   +   + + V R R+++++R  +    F+E +TPIL +      ++P       
Sbjct: 182 RVIDYLANGRSREVMVARARLVSTLRRFLEDHGFMEFATPILGSGNSGANATPFTTTSVH 241

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           V +  ++    ++  AP+ + + L+ SGFD+ ++I P FR+E   +   P EF   +   
Sbjct: 242 VKNNRDEPVQLSMRVAPELWLKKLVISGFDKVYEIGPVFRNEGVDATHNP-EFTSCEFYA 300

Query: 242 SFVEQDDILNTMENVLRGVFEEFSN 266
           +F      +   E + + +  E S 
Sbjct: 301 TFTSLAQTMEFTEKLFQRLIAELST 325


>gi|238789294|ref|ZP_04633081.1| Asparaginyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238722626|gb|EEQ14279.1| Asparaginyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 466

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 117/302 (38%), Gaps = 43/302 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV------- 65
           G + V S V + GWV R R          RD       VA  D +CF+  ++V       
Sbjct: 12  GRAAVDSEVTVRGWV-RTR----------RDSKAGISFVAVYDGSCFDPLQAVVNNTLPN 60

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILS-VAEELPLPVFGEREYPES 123
             + VL +          T+ A+   GQ  E+ A  I+++  V +    P+  +R    S
Sbjct: 61  YQDEVLHLTTGCSVEVTGTVVASPGEGQSFEIQATAIKVVGWVDDPDTYPMAAKRH---S 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181
           I +      LR  T     V R R  +     R   EN +   STP++TAS  EGA +  
Sbjct: 118 IEYLREVAHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMF 177

Query: 182 VPS--------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             S        R + G+      F+   A      Q      A    + +   P FR E+
Sbjct: 178 RVSTLDLENLPRTDTGAIDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD-DAI 283
             + R   EF+ ++ E++F   DD+    E +L+ VF+   N       F     D DA+
Sbjct: 238 SNTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERVDKDAV 297

Query: 284 RR 285
            R
Sbjct: 298 DR 299



 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLISYVTGVQNVRDVIPFPRT 460


>gi|293977881|ref|YP_003543311.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN]
 gi|292667812|gb|ADE35447.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN]
          Length = 453

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 105/270 (38%), Gaps = 30/270 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM-S 79
           + + GWV   R +  II   I D   I  +    D   +     +     L + G+V+ S
Sbjct: 23  ISIKGWVKHFRSNCFII---ISDGSTIKNIQIYVDKHNYSFLNKINIGVSLEVIGVVVFS 79

Query: 80  RSAETINANIITGQIELSAQKIEILSV--AEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +  + I        IE+ A KI+I      E+L   +   +E+      +  +L  R   
Sbjct: 80  KGKKQI--------IEIYANKIKIYGSFNPEDLQNTILQPKEHSFKKLREQAYLRFRTTI 131

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS------F 191
               +  R  I  S+      + F   +TPI+T    EGA D    +   + +       
Sbjct: 132 FSSIMRIRHNISFSIHKFFYKKKFYYINTPIITTYDTEGAGDMFRVTNFKKNNNLDFFGA 191

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y       Q +    ASG  + +   P FR E   + R   EF+ ++ E+SF E ++I++
Sbjct: 192 YTYLTVSGQLQGEAAASGLGKIYTFGPTFRAEKSNTFRHLSEFWMIEPEISFYELNNIMS 251

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
             E  L+ + +            ++ CY+D
Sbjct: 252 LAEEFLKFIIKY----------VIKHCYED 271


>gi|261880137|ref|ZP_06006564.1| lysine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270333107|gb|EFA43893.1| lysine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 267

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 31/222 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---------L 71
           V ++G +   R  G   F++++D  G  QV    D  C    K + ++           +
Sbjct: 54  VVIAGRMMSRRVMGKASFMELQDSKGRIQVYVTRDDICPGEDKDLYNKVFKKLLDIGDFI 113

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            I G V             TG+I + A++I++LS + + PLP+        + + + PE 
Sbjct: 114 GIKGFVFRTQ---------TGEISVHAKEIKLLSKSLK-PLPIVKYKDGVAYDKFDDPE- 162

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           +R + R++DL   D + +  +KR  ++ +MR       + E  TPIL + +    AR F+
Sbjct: 163 LRARQRYVDLVVNDGVKETFLKRATVLRTMRKFFDEAGYTEVETPILQSIAGGASARPFI 222

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
                     Y +  A + Y + L+  GF+  ++I   FR+E
Sbjct: 223 THFNALNIDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNE 263


>gi|212716371|ref|ZP_03324499.1| hypothetical protein BIFCAT_01290 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660624|gb|EEB21199.1| hypothetical protein BIFCAT_01290 [Bifidobacterium catenulatum DSM
           16992]
          Length = 558

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 33/245 (13%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I + A + PLP    ++  E  R +  ++ +  D   +N+V+ R++ +
Sbjct: 181 TGELSVFATEWAIAAKALQ-PLPAL-HKDLNEDTRTRKPYIGMIADEKIRNMVRNRSKAV 238

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R      +F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 239 ASLRKTFADHDFLEVETPMLQTVHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 297

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           G DR F+I   FR+E   +   P        E + VE               ++ + N +
Sbjct: 298 GIDRVFEINRDFRNEGVDATHAP--------EFTMVE--------------AYQAYGNYD 335

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           T+     ++  D A+  +GT K      + + + TE+    E++  S   S++       
Sbjct: 336 TIGALVKQLVQDTAMDVFGTHK------VTLLDGTEYDFGGEWKTISMYDSLSEALGEEI 389

Query: 329 IPAKG 333
           +P  G
Sbjct: 390 VPNGG 394



 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 467 KWDLYVRGFELATG--YSELNDPVVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 524

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 525 PAGGMGMGIDRLLIALTGA-TIRETITFPL 553


>gi|157363382|ref|YP_001470149.1| lysyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166980071|sp|A8F4K1|SYK_THELT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157313986|gb|ABV33085.1| lysyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 498

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 1/50 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM-SQNFCDLLMGS 575
           RA + G+PP GG+  GIDR++MLL  + ++R+V  FP+ SQ   D L GS
Sbjct: 446 RALEYGLPPTGGLGIGIDRLIMLLTNSPSIRDVIAFPLVSQTEEDDLEGS 495



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/243 (21%), Positives = 103/243 (42%), Gaps = 18/243 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLCIDGL 76
           +  +G V  VR HG   F  I+D YG  Q     +    E      K +    ++ I G 
Sbjct: 55  ISTAGRVMTVRLHGKSCFFTIKDFYGRIQAYIRQNEISEEKYNLFKKYIAPGDIIGITGF 114

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
                         TG++ +  +  ++LS +   PLP        + + ++ R++D+   
Sbjct: 115 PFKSR---------TGELTVYVKNFQLLSKSRR-PLPEKWHGLKDKEVAYRQRYVDMIAN 164

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYAL 194
           D+  +    R   I  +R  +   +F+E  TP+L      G A+ F+          Y L
Sbjct: 165 DSTLERFRIRYEAIRFIRDFLNRLDFVEVETPVLNFIPGGGAAKPFITRLEALDCEMY-L 223

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ + +  +  GF++ ++I   FR+E       P EF  +++  ++ + +D++   E
Sbjct: 224 RIAPELHLKRYIVGGFEKVYEIGKNFRNEGISYKHSP-EFTSIEIYQAYADYNDMMELTE 282

Query: 255 NVL 257
           +++
Sbjct: 283 SLI 285


>gi|154174894|ref|YP_001407789.1| lysyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|153793144|gb|EAT99544.2| lysyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 503

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 64/292 (21%), Positives = 119/292 (40%), Gaps = 29/292 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID--- 74
           G +V L+G +  +R  G  IF +I D  G  Q+  +         K++ SEW   +    
Sbjct: 56  GQYVSLAGRIKLIRDAGKAIFANIEDENGNLQIYFS--------NKTLDSEWFKVVKKNI 107

Query: 75  ---GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
               ++  R    +     TG+  +   ++ + S A   PLP           R++ R+L
Sbjct: 108 EVGDIIYVRGYAFVTR---TGEFSMHVSELNLASKAIS-PLPEKFHGLVDIETRYRQRYL 163

Query: 132 DLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL  +  +  +  KR+ II+++R  +  + F+E  TP++   +        V      G 
Sbjct: 164 DLIMNPEVRSDFKKRSIIISTIRRFIEEKGFLEVETPMMHPIAGGANAKPFVTFHNALGV 223

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  AP+ Y + L+  GF+  + +   FR+E       P EF  ++   ++    D++
Sbjct: 224 NRYLRIAPELYLKRLIVGGFEAVYDMNRNFRNEGMDLTHNP-EFTSIEFYWAYHTYHDLM 282

Query: 251 NTMENVLRGVFEEFS-------NGNTV--SNNFLRICYDDAIRRYGTDKPDL 293
              E +   + ++         +G  V  S  F R+ Y  A+   G   P +
Sbjct: 283 GLTEELFNVLIDKLDLPKVIEFDGMQVDFSKPFARLNYKKALVEVGGLDPQI 334



 Score = 45.4 bits (106), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA    MPP  G   GIDR+VMLL   K++R+V LFP
Sbjct: 453 RALGYAMPPTAGEGIGIDRLVMLLTNKKSIRDVVLFP 489


>gi|169769410|ref|XP_001819175.1| asparaginyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
 gi|83767033|dbj|BAE57173.1| unnamed protein product [Aspergillus oryzae]
          Length = 571

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 115/285 (40%), Gaps = 27/285 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VHR+R    ++F+ + D YG  Q +   D        ++     + I G +
Sbjct: 146 GTRVRVLGRVHRLRSQKDVVFITLTDGYGYLQCILTGDMVKAYDIMTLTLGTSMSIHGEM 205

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLDL 133
            +   +    N      EL A    I+  A    E +   V  + + P+++ +  R L L
Sbjct: 206 RAVPPKQHAPN----NRELHADFFTIIGRAAGDKEAITTRVAPDSD-PQTL-YDNRHLVL 259

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +T    +  R   + + R        +E + P +  +  EG           + ++  
Sbjct: 260 RGETASAVMKVRAATLRAFRKVFEENRMLEVTPPAMVQTQVEGGSTLFKFDYYGENAY-- 317

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  + S  D  F + P FR E   + R   E+  ++ E+ F+   D+L+ +
Sbjct: 318 LTQSSQLYLETCLPSLGD-VFCVCPSFRAEKSLTRRHLSEYTHIEAELDFITFTDLLDHL 376

Query: 254 ENVLRGVFE---------EFSNG-----NTVSNNFLRICYDDAIR 284
           E V+  V E          F N         S  F R+ Y DAI+
Sbjct: 377 EAVICRVIELILAEPETAAFINQLNPDFKPPSRPFRRMKYSDAIQ 421


>gi|330445747|ref|ZP_08309399.1| asparaginyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489938|dbj|GAA03896.1| asparaginyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 466

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 109/275 (39%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV-------RSE 68
           V S V + GWV   R    GI FL I D             +CF+  ++V         +
Sbjct: 16  VDSEVTVRGWVRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNELNNYQD 63

Query: 69  WVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
            VL +          TI A+   GQ  EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGTIVASPAKGQDFELAATNVKVVGWVEDADSYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + F   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGFFWMSAPLITASDCEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     +    + +        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMANLPMTDKGEVDFDKDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F E DD+    E++L+ VF+
Sbjct: 241 SRHLAEFWMVEPEVAFAELDDVAKLAEDMLKYVFK 275


>gi|255564836|ref|XP_002523412.1| lysyl-tRNA synthetase, putative [Ricinus communis]
 gi|223537362|gb|EEF38991.1| lysyl-tRNA synthetase, putative [Ricinus communis]
          Length = 585

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/267 (20%), Positives = 117/267 (43%), Gaps = 10/267 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + FL +RD  G  Q+    +    +  + +++   L   G ++  
Sbjct: 120 VSIAGRIVARRAFGKLAFLTLRDDSGTIQLYCEKERLLNDEFEKLKT---LVDIGDILGA 176

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           S          G++ +      IL+ +  LPLP           R++ R++D+  +    
Sbjct: 177 SGSMKRTE--KGELSICVNSFTILTKSL-LPLPDKYHGLTDVDKRYRQRYVDMIANPEVA 233

Query: 141 NIV-KRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAP 198
           ++  KR +I++ +R  + +  F+E  TP+L  A+    AR F V    + G    L  A 
Sbjct: 234 DVFRKRAKIVSEIRKTVESSGFLEVETPVLQGAAGGAEARPF-VTYHNSLGRDLYLRIAT 292

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + ++  GF++ ++I   FR+E   +   P EF  ++M  ++ +   ++N  E ++ 
Sbjct: 293 ELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNP-EFTTIEMYEAYSDYQSMMNMAEEIVT 351

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRR 285
                     T+    + +C +   RR
Sbjct: 352 RCALAVHGKLTIDYQGVDVCLERPWRR 378



 Score = 44.7 bits (104), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 544 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPV 580


>gi|238749748|ref|ZP_04611253.1| Asparaginyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238712403|gb|EEQ04616.1| Asparaginyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 463

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 117/302 (38%), Gaps = 43/302 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV------- 65
           G + V S V + GWV R R          RD       VA  D +CF+  ++V       
Sbjct: 9   GRAAVDSEVTVRGWV-RTR----------RDSKAGISFVAVYDGSCFDPLQAVVNNTLPN 57

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILS-VAEELPLPVFGEREYPES 123
             + VL +          T+ A+   GQ  E+ A  I+++  V +    P+  +R    S
Sbjct: 58  YQDEVLHLTTGCSVEVTGTVVASPGEGQSFEIQATAIKVVGWVDDPDTYPMAAKRH---S 114

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181
           I +      LR  T     V R R  +     R   EN +   STP++TAS  EGA +  
Sbjct: 115 IEYLREVAHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMF 174

Query: 182 VPS--------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             S        R + G+      F+   A      Q      A    + +   P FR E+
Sbjct: 175 RVSTLDLENIPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAEN 234

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD-DAI 283
             + R   EF+ ++ E++F   DD+    E +L+ VF+   N       F     D DA+
Sbjct: 235 SNTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERVDKDAV 294

Query: 284 RR 285
            R
Sbjct: 295 DR 296



 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 378 DVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 432

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 433 LGFERLISYVTGVQNVRDVIPFPRT 457


>gi|332519717|ref|ZP_08396181.1| lysyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332044276|gb|EGI80470.1| lysyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 544

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 19/253 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ V ++G +   R  G   F +++D  G  QV  N D  C   A   +S++      L+
Sbjct: 27  GTQVVIAGRLMSRRIQGNASFAELQDSEGRIQVYFNRDEIC---AGDDKSKYNNVYKKLL 83

Query: 78  MSRSAETINANIIT---GQIELSAQKIEILSVA-EELPLPVF---GEREY----PESIRF 126
                  I   + T   G+  +  +   +LS A + LPLP     G +      PE +R+
Sbjct: 84  DIGDFIGIEGELFTTKVGEKTVLVKDFTLLSKALKPLPLPKVDADGNQHDAFVDPE-MRY 142

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+ DL  +   K + VKRT++ N+MR       + E  TPIL        AR F+   
Sbjct: 143 RQRYADLAVNPHVKEVFVKRTKLFNAMRSFFNDAGYFEVETPILQPIPGGAAARPFITHH 202

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ 
Sbjct: 203 NSLDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYK 260

Query: 245 EQDDILNTMENVL 257
           + + +++  E +L
Sbjct: 261 DYNWMMDFCEKLL 273



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 437 RALEYGMPPTSGMGIGMDRLIMFLTNNQSIQEVLFFP 473


>gi|255011768|ref|ZP_05283894.1| asparaginyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313149606|ref|ZP_07811799.1| asparaginyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313138373|gb|EFR55733.1| asparaginyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 467

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 111/277 (40%), Gaps = 36/277 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     +   D G+ V + GWV   R    + F+ + D   I  V    D A F  E+ 
Sbjct: 6   RTKIVDLIKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQVVVDLANFNEEML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREY 120
           K + +   L ++G+        +  ++ +GQ  E+ A++IE+L   +   PL   G    
Sbjct: 66  KQITTGACLSVNGV--------LTESVGSGQKAEVQAREIEVLGACDNTYPLQKKGH--- 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGAR 178
             S+ F      LR  T     V R R  +  ++      + F    TPI+T S  EGA 
Sbjct: 115 --SMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITGSDCEGAG 172

Query: 179 DFLVPSRVN--------QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221
                + +N         GS      F+    +     QL   L A+     +   P FR
Sbjct: 173 QMFQVTTMNLYDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            E+  + R   EF+ ++ E++F E  + ++  E  ++
Sbjct: 233 AENSNTPRHLAEFWMIEPEVAFNEIQENMDLAEEFIK 269


>gi|288799729|ref|ZP_06405188.1| lysine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332977|gb|EFC71456.1| lysine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 577

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP
Sbjct: 459 RALQYGMPPTSGIGIGIDRMVMLMTGQTAIQEVLLFP 495



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 127/284 (44%), Gaps = 29/284 (10%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLVMS 79
           ++G +   R  G   F +++D  G  QV    D  C +  K + +   + +L I   +  
Sbjct: 56  IAGRMMTRRIMGKASFAELQDSKGRIQVYITRDDICPDENKDLYNTIFKRLLDIGDFI-- 113

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFL 131
              +       TG+I + A+++ +LS + + PLP+        + + + PE +R++ R++
Sbjct: 114 -GVKGFVFRTQTGEISVHAKELVLLSKSLK-PLPIVKYKDDVAYDKFDDPE-LRYRQRYV 170

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL   D +    +KR   I ++R  + A  + E  TP L   +    AR F+        
Sbjct: 171 DLVVNDGIKDTFLKRATAIKTLRDVLDAAGYTEVETPTLQQIAGGASARPFITHFNALNT 230

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + +
Sbjct: 231 EMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP-EFTCMELYVQYKDYNWM 288

Query: 250 LNTMENVLR-------GVFEEFSNGNTVSNN--FLRICYDDAIR 284
           ++  E +L        G  E   +G T+S    + R+   DAI+
Sbjct: 289 MDFTEKLLETICIAVNGSAETVVDGKTISFKAPYRRLPILDAIK 332


>gi|229148486|ref|ZP_04276743.1| Lysyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228635028|gb|EEK91600.1| Lysyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 499

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|195164590|ref|XP_002023129.1| GL21125 [Drosophila persimilis]
 gi|194105214|gb|EDW27257.1| GL21125 [Drosophila persimilis]
          Length = 557

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 63/288 (21%), Positives = 115/288 (39%), Gaps = 25/288 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEW 69
           G  + GS V++ GWVHR+R  G G         + +   V N D  C  +E         
Sbjct: 129 GTENRGSRVKVYGWVHRLRRQGKGPDIHHAEGWHWVPACVLN-DQLCQTYEALTLSTEST 187

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           V+    L +    +T       G  EL+    E++ +A           E    ++   R
Sbjct: 188 VVLFGTLKLIPEGKT-----APGGHELNVDYWELIGLAPPGGADAILNEEAQPDVQLDNR 242

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            + +R +   K +  R+ ++ + R   +A  + E + P L  +  EG          ++ 
Sbjct: 243 HIMIRGENTSKVLKMRSVVMQAFRAHYLARGYNEVTPPTLVQTQVEGGSTLFKLQYFSEE 302

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV----- 244
           ++  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+     
Sbjct: 303 AY--LTQSSQLYLETCLPALGD-VFTIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFDDL 359

Query: 245 ---EQDDILNTMENVLRG-----VFEEFSNGNTVSNNFLRICYDDAIR 284
               +D + + ++ VL+      V E   +    +  F R+ Y DAI+
Sbjct: 360 LDRLEDLVCDVVDRVLKSPWGNLVKELNPDFKPPTKPFRRMNYSDAIK 407



 Score = 40.4 bits (93), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 12/90 (13%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGI 539
           L+ N  EI  G +R   SE +L+ +   GI  +      + R  G          PHGG 
Sbjct: 474 LLPNVGEIVGGSMRIFDSEELLKGYQREGIDPKPYYWYTDQRIYGTL--------PHGGY 525

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G++R +  LL   ++REV L+P   + C
Sbjct: 526 GLGLERFLCWLLNRYHIREVCLYPRFLDRC 555


>gi|256028802|ref|ZP_05442636.1| lysyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 242

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + GMPP GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 200 EALEYGMPPTGGMGIGIDRLVMLLTGSPSIRDVILFP 236


>gi|160890593|ref|ZP_02071596.1| hypothetical protein BACUNI_03038 [Bacteroides uniformis ATCC 8492]
 gi|270295728|ref|ZP_06201928.1| asparaginyl-tRNA synthetase [Bacteroides sp. D20]
 gi|317479867|ref|ZP_07938985.1| asparaginyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|156859592|gb|EDO53023.1| hypothetical protein BACUNI_03038 [Bacteroides uniformis ATCC 8492]
 gi|270273132|gb|EFA18994.1| asparaginyl-tRNA synthetase [Bacteroides sp. D20]
 gi|316903976|gb|EFV25812.1| asparaginyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 467

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 112/277 (40%), Gaps = 36/277 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L   D G+ V + GWV   R    + F+ + D   I  V    D   F  E+ 
Sbjct: 6   RTKIVDLLKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLGNFDEEML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREY 120
           K + +   L ++G+        +  ++ +GQ  E+ A++IE+L   +   PL   G    
Sbjct: 66  KEITTGACLSVNGV--------LTESVGSGQKAEVQAREIEVLGTCDNTYPLQKKGH--- 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGA- 177
             S+ F      LR  T     V R R   ++       +  F    TPI+TAS  EGA 
Sbjct: 115 --SMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHDRGFFYFHTPIITASDCEGAG 172

Query: 178 RDFLVPSR-------------VNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221
           + F V ++             +    F+    +     QL   L A+     +   P FR
Sbjct: 173 QMFQVTTKNLYDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            E+  + R   EF+ ++ E++F +  D ++  E+ ++
Sbjct: 233 AENSNTPRHLAEFWMIEPEVAFNDITDNMDLAEDFIK 269


>gi|308175903|ref|YP_003915309.1| lysine-tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307743366|emb|CBT74338.1| lysine-tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 504

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 12/186 (6%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIIN 150
           G++ + A   E+ S A   PLPV    +  E  R + R+ DL  R+   + + KR  II 
Sbjct: 136 GELSIMADAWEMASKALR-PLPVL-HADLNEETRVRQRYADLIVRNEAREMVYKRAAIIR 193

Query: 151 SMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF---YALPQAPQQYKQLLM 206
           ++R  +   +++E  TP+L        AR F    + +  +F     +  A + Y +  +
Sbjct: 194 AVRNTLEGHDYVEVETPMLQLVHGGASARPF----KTHLNAFDQEMTMRIALELYLKRAV 249

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
             G DR F+I   FR+E   S   P EF  L+   ++ +Q  +   M+ ++    +    
Sbjct: 250 VGGVDRVFEIGRIFRNEGVDSTHSP-EFTMLECYEAYADQYVMAQRMQQMILNAADAIGA 308

Query: 267 GNTVSN 272
           G T+  
Sbjct: 309 GRTIET 314



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + G PP GGI  GIDR+VML   A  +RE  LFP+
Sbjct: 463 RALEYGAPPMGGIGLGIDRLVMLFSNA-GIRETILFPL 499


>gi|325981413|ref|YP_004293815.1| lysyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325530932|gb|ADZ25653.1| lysyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 501

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 131/291 (45%), Gaps = 24/291 (8%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           C    + +  + V+++G +   R  G   F  I+D  G  Q+  + D    E A +    
Sbjct: 53  CSKEELEEQSAVVKIAGRMVLKRVMGKASFATIQDMTGRIQLYISNDHTG-ETAHAAFKH 111

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
           + L   G ++   A+ I     TG++ +   ++++L+ +   PLP        +  +++ 
Sbjct: 112 YDL---GDILG--AQGILFKTKTGELSIRVTELQLLTKSLR-PLPEKFHGLADQEQKYRQ 165

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSR 185
           R+LDL  +   + +   R+R+I ++R   +  N++E  TP++    P GA  + F     
Sbjct: 166 RYLDLITNEETRRVFTIRSRVIQAIREFFVERNYLEVETPMM-HPIPGGASAKPFSTHHN 224

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG----EFYQLDME- 240
               + + L  AP+ Y + L+  G ++ F+I   FR+E   +   P     EFY+   + 
Sbjct: 225 ALDMALF-LRIAPELYLKRLVVGGMEKVFEINRNFRNEGISTRHNPEFTMLEFYEAYQDH 283

Query: 241 ---MSFVEQDDILNTMENVLRGVFEEFSNGNT--VSNNFLRICYDDAIRRY 286
              M F EQ  +  T + VL G       G T  +S  F+R+    AI+++
Sbjct: 284 TYLMDFTEQ-MLAYTAQKVL-GTTHLTYQGKTMDLSRPFMRLTIIQAIQKF 332



 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F     +K+  ++    +   Y RA + G+PP 
Sbjct: 409 RFELYIAGREIANGFSELNDPEDQAARFLEQAKAKDAGDSEAMHYDADYIRALEYGLPPT 468

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 469 AGEGIGIDRLVMLLTDSPSIRDVILFP 495


>gi|154322360|ref|XP_001560495.1| hypothetical protein BC1G_01327 [Botryotinia fuckeliana B05.10]
 gi|150850574|gb|EDN25767.1| hypothetical protein BC1G_01327 [Botryotinia fuckeliana B05.10]
          Length = 454

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 3/123 (2%)

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
           +  F +   P L  ++ EG  +       ++ ++ A  Q+PQ YKQ  +A G  R + + 
Sbjct: 156 SHRFKKFHPPCLIGAASEGGANVFRMPYFDKEAYLA--QSPQFYKQFEIAGGRKRVYCVG 213

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           P FR E+  + R   EF  LD+EM   E   ++L+ +E VL  +F   +         +R
Sbjct: 214 PVFRAENSNTPRHMTEFIGLDLEMEIDEHYHEVLHMLEGVLLFIFRNLAENYREEIELVR 273

Query: 277 ICY 279
             Y
Sbjct: 274 SIY 276


>gi|123441875|ref|YP_001005858.1| asparaginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332162184|ref|YP_004298761.1| asparaginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|166232743|sp|A1JMN8|SYN_YERE8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|122088836|emb|CAL11642.1| asparaginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318606238|emb|CBY27736.1| asparaginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325666414|gb|ADZ43058.1| asparaginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330860164|emb|CBX70485.1| asparaginyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 466

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 117/302 (38%), Gaps = 43/302 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV------- 65
           G + V S V + GWV R R          RD       VA  D +CF+  ++V       
Sbjct: 12  GRAAVDSEVTVRGWV-RTR----------RDSKAGISFVAVYDGSCFDPLQAVVNNTLPN 60

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILS-VAEELPLPVFGEREYPES 123
             + VL +          T+ A+   GQ  E+ A  I+++  V +    P+  +R    S
Sbjct: 61  YQDEVLHLTTGCSVEVTGTVVASPGEGQSFEIQATAIKVVGWVDDPDTYPMAAKRH---S 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181
           I +      LR  T     V R R  +     R   EN +   STP++TAS  EGA +  
Sbjct: 118 IEYLREVAHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMF 177

Query: 182 VPS--------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             S        R + G+      F+   A      Q      A    + +   P FR E+
Sbjct: 178 RVSTLDLENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD-DAI 283
             + R   EF+ ++ E++F   DD+    E +L+ VF+   N       F     D DA+
Sbjct: 238 SNTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERVDKDAV 297

Query: 284 RR 285
            R
Sbjct: 298 DR 299



 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLISYVTGVQNVRDVIPFPRT 460


>gi|56460435|ref|YP_155716.1| asparaginyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81363174|sp|Q5QZ13|SYN_IDILO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|56179445|gb|AAV82167.1| Asparaginyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 466

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 121/315 (38%), Gaps = 53/315 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   V   V + GWV   R    GI F+++ D      + A   +     +  V+     
Sbjct: 12  GKVAVDETVTVRGWVRTRRDSKAGISFINLHDGSCFDAIQAVVPAELPNYSNEVQKLTTG 71

Query: 72  C---IDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           C   I G+V+    +        GQ  EL A K+ +    E+    P+  +R   E +R 
Sbjct: 72  CSVAITGVVVPSQGK--------GQSFELQATKVHVYGWVEDPDTYPMAPKRHSMEYLR- 122

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           +Y  L  R +     +  R  +  ++      E ++  STPI+T S  EGA +    S +
Sbjct: 123 EYAHLRPRTNITGAVMRVRNALSQAIHRFFHEEGYLWVSTPIITTSDCEGAGEMFRVSTL 182

Query: 187 NQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDR 229
           +  +     +    Y +        L  SG            + +   P FR E+  + R
Sbjct: 183 DMLNIPKTDKGEVDYSEDFFGKEAFLTVSGQLNVESYACSLSKVYTFGPTFRAENSNTSR 242

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE--------------EFSNGNTVS---- 271
              EF+ ++ E++F   DD+    E +L+ VF+              E  N + +S    
Sbjct: 243 HLSEFWMVEPELAFATLDDVAGLAEAMLKYVFKAVLEERPDDMAFFAERINSDAISRLEA 302

Query: 272 ---NNFLRICYDDAI 283
              N+F+ + Y DAI
Sbjct: 303 IVNNDFVHMDYTDAI 317



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +++ Q    + + KE       G YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSAREERLDILDQRIDEMNLPKEEY-----GFYRDLRRYGTVPHAGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            G +R+V  + G +N+R+V  FP
Sbjct: 436 LGFERLVAYVTGVQNIRDVIPFP 458


>gi|320107678|ref|YP_004183268.1| lysyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319926199|gb|ADV83274.1| lysyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 561

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 21/199 (10%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT------------- 137
           T ++ +   ++  LS A  LPLP          +R++ R++DL  DT             
Sbjct: 150 TNELSVHVTELTFLSKAM-LPLPDKFHGLEDVELRYRQRYVDLFSDTGDFEGEGEEAKQT 208

Query: 138 ---LHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYA 193
                   VKR  ++ ++R       +IE  TP++   +    AR F           + 
Sbjct: 209 RLPARDVFVKRAAVLRALRKFFDDRGYIEVETPMMQPVAGGAAARPFTTHHNALDLDLF- 267

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  G DR ++I   FR+E   +   P EF  L+   ++    D++   
Sbjct: 268 LRIAPELYLKRLVVGGMDRVYEINRNFRNEGVSTRHNP-EFTMLEFYQAYANYHDLMQIT 326

Query: 254 ENVLRGVFEEFSNGNTVSN 272
           E+++  V +E  NG T++N
Sbjct: 327 EDLVSFVAKEV-NGTTITN 344



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA   G+PP GG   GIDR+ M+L GAK++R+V LFP+
Sbjct: 504 RALSYGLPPTGGEGIGIDRLTMVLTGAKSIRDVILFPL 541


>gi|315122583|ref|YP_004063072.1| lysyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495985|gb|ADR52584.1| lysyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 496

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 120/260 (46%), Gaps = 21/260 (8%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H   D    D+   V ++G V+  R  G  +F+D+ D  G  Q+  + ++   +     
Sbjct: 51  SHLQDDEKSEDI---VTIAGRVYSSRNSG--MFMDLHDASGKIQIFTHKNTTDQD----- 100

Query: 66  RSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123
               +  ID G ++  + +        G++ +++Q I +L+ A   +P   +G  +    
Sbjct: 101 SQNLLPMIDLGDIIGVTGQVRRTK--RGELTVNSQTITMLTKALNSIPETYYGLSDI--E 156

Query: 124 IRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FL 181
            R++ R+LD+  +   K    +R+RII+ +R  M    F+E  TPIL         D F+
Sbjct: 157 TRYRKRYLDIISNPDSKLRFQQRSRIISQIRHFMENNGFMEVETPILQPIYGGATADPFI 216

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
               + +   Y L  AP+ Y + ++ SG  D+ F++   FR+E   S   P EF  ++  
Sbjct: 217 THHNILKADMY-LRIAPELYLKRVLVSGLTDQVFELNRNFRNEGISSRHNP-EFTMIEAY 274

Query: 241 MSFVEQDDILNTMENVLRGV 260
            ++ +  D++  +E++   +
Sbjct: 275 WAYTDYRDMMKLVEDLFHNL 294



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 13/94 (13%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG--------LYRAFQCG 532
           +++  CNG+EI      N  SE+       + + K++ ++   G           A   G
Sbjct: 405 RFETYCNGWEIC-----NAFSELNDPIEQRIRMEKQLKQSHKRGEKIILDEDFLDAMTYG 459

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP  G+  GIDR++MLL  A ++R+V LFP+ +
Sbjct: 460 MPPASGLGLGIDRLIMLLTNAPSIRDVILFPVQR 493


>gi|331213317|ref|XP_003319340.1| lysyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309298330|gb|EFP74921.1| lysyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 563

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 2/145 (1%)

Query: 125 RFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           R + R+LDL  +   +++ + R R+IN +R  +    F+E  TP++   +        + 
Sbjct: 248 RHRKRYLDLIMNKEVRDVFITRARVINHVRRFLDDLGFLEVETPMMNMIAGGATAKPFIT 307

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              + G    L  AP+ Y + L+  G DR ++I   FR+E       P EF   +  M++
Sbjct: 308 HHNSLGLDLFLRIAPELYLKELVVGGLDRVYEIGRVFRNESIDLTHNP-EFSICEFYMAY 366

Query: 244 VEQDDILNTMENVLRGVFEEFSNGN 268
            +  D++   E +L G+  + +NG+
Sbjct: 367 ADMYDLMQLTEAMLSGLVHKLNNGS 391



 Score = 43.5 bits (101), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 27/39 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + G+PP GG   GIDR+VMLL  + +++EV  FP ++
Sbjct: 518 ALEHGLPPTGGWGLGIDRLVMLLTDSNSIKEVLCFPANK 556


>gi|251792588|ref|YP_003007314.1| asparaginyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247533981|gb|ACS97227.1| asparaginyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 467

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 104/271 (38%), Gaps = 38/271 (14%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE +   
Sbjct: 17  IGEKVTVRGWVRTRRDSKAGLSFLAVYDGSCFAPIQAIVNNDITNYE------SEVLRLT 70

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLD 132
            G  +  +   + +      +EL A+ +E+    E+    P+  +R    SI +      
Sbjct: 71  AGCSVIVAGTVVESPAEGQAVELQAENVEVAGWVEDPETYPMAAKRH---SIEYLREVAH 127

Query: 133 LRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV+   
Sbjct: 128 LRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RVSTLD 184

Query: 191 FYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
              LP+  +                    Q      A    + +   P FR E+  + R 
Sbjct: 185 LENLPRTDKGTVDFSEDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRH 244

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
             EF+ ++ E++F    D     E++L+ VF
Sbjct: 245 LAEFWMIEPEVAFATLADNAKLAEDMLKYVF 275


>gi|237745577|ref|ZP_04576057.1| lysyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229376928|gb|EEO27019.1| lysyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 511

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR+VMLL  + N+R+V LFP
Sbjct: 469 RALEYGMPPAGGCGIGIDRLVMLLTDSPNIRDVILFP 505



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 5/170 (2%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           TG++ +    + +++ +   PLP        + IR++ R++DL   +   +    RT  I
Sbjct: 139 TGELTIRVTALRLITKSVR-PLPDKFHGLSDQEIRYRQRYVDLIMNEETRRTFRARTAAI 197

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R  M    F+E  TP+L A      A+ F+          + +  AP+ Y + L+  
Sbjct: 198 ASIRRFMGENGFMEVETPMLHAIPGGAAAKPFITYHNALDMQMF-MRIAPELYLKRLLVG 256

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           GFDR F++   FR+E   S R   EF  ++   ++V+   +++  E V+R
Sbjct: 257 GFDRVFELNRNFRNEGV-SPRHNPEFTMMEFYAAYVDYRWLMDFTETVIR 305


>gi|59711766|ref|YP_204542.1| asparaginyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|75354119|sp|Q5E5P2|SYN_VIBF1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|59479867|gb|AAW85654.1| asparaginyl tRNA synthetase [Vibrio fischeri ES114]
          Length = 466

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 124/318 (38%), Gaps = 65/318 (20%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV-------RSE 68
           V S V + GW+   R    GI FL + D             +CF+  ++V        ++
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAVYD------------GSCFDPIQAVVPNDLNNYND 63

Query: 69  WVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
            VL +          TI A+   GQ  EL+A +++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGTIVASPAKGQDFELAATEVKVVGWVEDAETYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWMSAPLITASDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     +    Y +        L  SG            + +   P FR E+  +
Sbjct: 181 TLDHANLPLDDKGNVDYDKDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSHT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT-------- 269
            R   EF+ ++ E++F   DD+    E++L+ VFE          EF             
Sbjct: 241 SRHLAEFWMVEPEVAFATLDDVAKLAEDMLKYVFEAVLAERRDDLEFFASRIDKQAITRL 300

Query: 270 ---VSNNFLRICYDDAIR 284
              VS++F ++ Y DAI+
Sbjct: 301 EQFVSSDFAQVDYTDAIQ 318


>gi|30018348|ref|NP_829979.1| lysyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206972583|ref|ZP_03233526.1| lysyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218232500|ref|YP_002364927.1| lysyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228919027|ref|ZP_04082407.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228950625|ref|ZP_04112760.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228956518|ref|ZP_04118315.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229039982|ref|ZP_04189746.1| Lysyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229107763|ref|ZP_04237400.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229125594|ref|ZP_04254627.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229142883|ref|ZP_04271325.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229176677|ref|ZP_04304082.1| Lysyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|229188362|ref|ZP_04315411.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|296500912|ref|YP_003662612.1| lysyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|39932142|sp|Q81J70|SYK_BACCR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226737091|sp|B7HJ16|SYK_BACC4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|29893888|gb|AAP07180.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206732485|gb|EDZ49664.1| lysyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218160457|gb|ACK60449.1| lysine--tRNA ligase [Bacillus cereus B4264]
 gi|228595161|gb|EEK52931.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228606844|gb|EEK64260.1| Lysyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228640595|gb|EEK96983.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228657911|gb|EEL13716.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228675736|gb|EEL30943.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228727390|gb|EEL78583.1| Lysyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228803208|gb|EEM50029.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228809100|gb|EEM55584.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228840676|gb|EEM85937.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|296321964|gb|ADH04892.1| lysyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 499

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|329957323|ref|ZP_08297843.1| asparagine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328523036|gb|EGF50139.1| asparagine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 467

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 111/277 (40%), Gaps = 36/277 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F  E+ 
Sbjct: 6   RTKIVDLLKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLANFDEEML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREY 120
           K + +   L ++G+        +  ++ +GQ  E+ A++IE+L   +   PL   G    
Sbjct: 66  KDITTGACLSVNGV--------LTESVGSGQKAEIQAREIEVLGTCDNTYPLQKKGH--- 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGAR 178
             S+ F      LR  T     V R R  +  ++      + F    TPI+T S  EGA 
Sbjct: 115 --SMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHEFFHKKGFFYFHTPIITGSDCEGAG 172

Query: 179 DFLVPSRVN--------QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221
                + +N         GS      F+    +     QL   L A+     +   P FR
Sbjct: 173 QMFQVTTMNLYDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            E+  + R   EF+ ++ E++F +  D ++  E  ++
Sbjct: 233 AENSNTPRHLAEFWMVEPEVAFNDIADNMDLAEEFIK 269


>gi|301051815|ref|YP_003790026.1| lysyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300373984|gb|ADK02888.1| lysyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 499

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|229067841|ref|ZP_04201159.1| Lysyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228715325|gb|EEL67183.1| Lysyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 499

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|160944973|ref|ZP_02092199.1| hypothetical protein FAEPRAM212_02488 [Faecalibacterium prausnitzii
           M21/2]
 gi|158442704|gb|EDP19709.1| hypothetical protein FAEPRAM212_02488 [Faecalibacterium prausnitzii
           M21/2]
          Length = 462

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 73/331 (22%), Positives = 129/331 (38%), Gaps = 69/331 (20%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC-IDGL 76
           G+ + + GW   +R    I F            +A  D  CF+  + V     L   D +
Sbjct: 17  GTEITVCGWAKNIRDSKNIGF------------IALSDGGCFKTLQVVLEAGKLANYDEV 64

Query: 77  VMSRSAETINAN---IITGQ----IELSAQKIEILS--VAEELPLPVFGEREYPESIRFK 127
           + +    ++      ++T Q     EL+A+ +EIL    A+E PL     ++   S+ + 
Sbjct: 65  IHTGLYSSLRIKGKLVLTPQAKQPFELNAESVEILGDCPADEYPL-----QKKKMSMEYL 119

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRC-RMIAEN-FIECSTPILTASSPEGARDFL---- 181
                LR  T   N   R R + +    +   EN F+   +P++TAS  EGA +      
Sbjct: 120 RTMPTLRPRTNTFNAAFRVRSVAAYAIHKFFQENGFVYAHSPLITASDCEGAGEMFRVTT 179

Query: 182 -----VPSRVNQGS------FYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
                VP +   G+      F+  P       Q +   MA  F + +   P FR E   +
Sbjct: 180 LDLDNVP-KTEDGAVDYSKDFFEKPVNLTVSGQLEAEAMAMAFGKVYTFGPTFRAEKSFT 238

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSNGNTV--- 270
            R   EF+ ++ EM+F + +  ++  E +++ V              F +F +   V   
Sbjct: 239 TRHAAEFWMIEPEMAFCDLNGYMDNAEAMIKYVIRYVLDNCPDEMAFFNQFIDKGLVERL 298

Query: 271 ----SNNFLRICYDDAIRRYGTDKPDLRNPI 297
               ++ F RI Y +AI     +    + P+
Sbjct: 299 ELVANSEFARISYTEAIEILKKNNKKFQYPV 329


>gi|317009859|gb|ADU80439.1| lysyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 501

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFETEGFLEVETPMMHPI-PGGANARPFITYHNALEVERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|156387361|ref|XP_001634172.1| predicted protein [Nematostella vectensis]
 gi|156221252|gb|EDO42109.1| predicted protein [Nematostella vectensis]
          Length = 564

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 10/219 (4%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRS-EWVLCIDGLVM 78
           V++ GWVHR+R  G  ++F+ +RD  G  Q V   D  C      V S E  +C+ G+V 
Sbjct: 146 VKIFGWVHRLRRQGKNLMFVVLRDGTGFLQCVLT-DILCHTYEALVLSTEATVCLYGVVK 204

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           +            G  E++    E++  +    +      E     +   R + LR +TL
Sbjct: 205 A----VPEGKSAPGGHEMAVDYWELVGESPAGGVDNLVNEESAIDTQLDNRHIMLRGETL 260

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
            K +  R+ + +  R       ++E + P +  +  EG       +   + +F  L Q+ 
Sbjct: 261 AKILRMRSVVTHCFREHYFDRGYVELTPPCMVQTQVEGGSTLFKFNYFGEDAF--LTQSS 318

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           Q Y +  + +  D  F IA  +R E  R+ R   E + L
Sbjct: 319 QLYLETAIPALGD-VFCIAESYRAEQSRTRRHLAETFDL 356


>gi|145609922|ref|XP_001409909.1| hypothetical protein MGG_12574 [Magnaporthe oryzae 70-15]
 gi|145017307|gb|EDK01670.1| hypothetical protein MGG_12574 [Magnaporthe oryzae 70-15]
          Length = 599

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 3/115 (2%)

Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
           R  +    F E  +P +  ++ EG  +       ++  F A  Q+PQ YKQ  +A G  R
Sbjct: 281 RSYLKERGFHEFESPCIIEAASEGGANVFSADYFDKKVFLA--QSPQFYKQYEIAGGRQR 338

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSN 266
            F I P FR E+  + R   EF  LDMEM       ++ + +E V   +F E   
Sbjct: 339 VFCIGPVFRAENSNTPRHMTEFTGLDMEMVIKWHYHEVRDMLEGVFLHIFRELKK 393



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF-QCGMPPHGGIA 540
           YD    G EI SGG R H  E +       G+          G    F Q G+PPHGG  
Sbjct: 496 YDFFMRGQEIMSGGQRIHKPEEIEARMRRKGLDPN--SKGLKGYVNTFRQAGVPPHGGGG 553

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G+DR+V   L    V+  + +P + N
Sbjct: 554 IGLDRVVQFFLNLSTVQYAAFYPRTPN 580


>gi|225684263|gb|EEH22547.1| asparaginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 580

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/240 (20%), Positives = 100/240 (41%), Gaps = 5/240 (2%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VH +R    +IF+ + D YG+ Q +   D        ++  E  + I G +
Sbjct: 155 GTRVRVVGRVHHLRSQKDMIFVTLSDGYGLLQCIFTGDLVKTYDMMTLTLETSIAIHGEM 214

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
             R+   +N      ++      I   +  ++  +     R+      +  R L LR +T
Sbjct: 215 --RAVPPMNHAYDDRELHADFFTIIGRAAGDKEAITTRVARDSDPHTLYDNRHLVLRGET 272

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R   + + R     +  +E + P +  +  EG           + ++  L Q+
Sbjct: 273 SSSVMKVRAATLRAFRKAFEEKGMLEVTPPAMVQTQVEGGSTLFEFDYYGEKAY--LTQS 330

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  + S  D  F + P FR E   + R   E+  ++ E+ F+   D+L+ +E+++
Sbjct: 331 SQLYLETCLPSLGD-VFCVCPSFRAEKSLTRRHLSEYTHVEAELDFISFTDLLDHLEDMI 389


>gi|315634321|ref|ZP_07889608.1| asparagine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476911|gb|EFU67656.1| asparagine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 467

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 105/268 (39%), Gaps = 32/268 (11%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE +   
Sbjct: 17  IGEKVTVRGWVRTRRDSKAGLSFLAVYDGSCFAPIQAIVNNDIVNYE------SEVLRLT 70

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLD 132
            G  +  +   + +      +EL A+ +E+    E+    P+  +R    SI +      
Sbjct: 71  AGCSVIVTGTVVESPAEGQAVELQAESVEVTGWVEDPETYPMAAKRH---SIEYLREVAH 127

Query: 133 LRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T     V R R  +  ++      + F   +TP++TAS  EGA +    S ++  +
Sbjct: 128 LRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLEN 187

Query: 191 FYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGE 233
                +    + Q        L  SG            + +   P FR E+  + R   E
Sbjct: 188 LPRTDKGAVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAE 247

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVF 261
           F+ ++ E++F    D     E++L+ VF
Sbjct: 248 FWMIEPEVAFATLADNAKLAEDMLKYVF 275


>gi|289766705|ref|ZP_06526083.1| lysyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289718260|gb|EFD82272.1| lysyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 229

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 28/37 (75%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + GMPP GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 187 EALEYGMPPTGGMGIGIDRLVMLLTGSPSIRDVILFP 223


>gi|229077367|ref|ZP_04210034.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228705946|gb|EEL58265.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 499

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 29/43 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP   +  D
Sbjct: 457 ALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMHHKQD 499


>gi|197335346|ref|YP_002155960.1| asparaginyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|197316836|gb|ACH66283.1| asparaginyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 466

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 124/318 (38%), Gaps = 65/318 (20%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV-------RSE 68
           V S V + GW+   R    GI FL + D             +CF+  ++V        ++
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAVYD------------GSCFDPIQAVVPNDLNNYND 63

Query: 69  WVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
            VL +          TI A+   GQ  EL+A +++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGTIVASPAKGQDFELAATEVKVVGWVEDADTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWMSAPLITASDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     +    Y +        L  SG            + +   P FR E+  +
Sbjct: 181 TLDHANLPLDDKGNVDYDKDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSHT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT-------- 269
            R   EF+ ++ E++F   DD+    E++L+ VFE          EF             
Sbjct: 241 SRHLAEFWMVEPEVAFATLDDVAKLAEDMLKYVFEAVLAERRDDLEFFASRIDKQAITRL 300

Query: 270 ---VSNNFLRICYDDAIR 284
              VS++F ++ Y DAI+
Sbjct: 301 EQFVSSDFAQVDYTDAIQ 318


>gi|254421242|ref|ZP_05034960.1| lysyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196188731|gb|EDX83695.1| lysyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 524

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 127/306 (41%), Gaps = 36/306 (11%)

Query: 6   THSCG-------DLGVSDVGSF-VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS- 56
           THS         DL       F V ++G +   R  G + F  ++D  G  Q+     + 
Sbjct: 49  THSAAQLQAKFADLATGAEADFEVSVAGRIMARRVFGKLAFFTLQDQTGTIQLYLEKKTI 108

Query: 57  --ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
             A  E  +   +      D   +  +  TI      G++ +  +   +L+ +  LPLP 
Sbjct: 109 QAAMGEADEQAFNHLKQLTDAGDILGARGTIK-RTDKGELSVKVKHYAMLTKSL-LPLPD 166

Query: 115 FGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                   + R++ R++DL      RDT  K    R +I  ++R  +    ++E  TP+L
Sbjct: 167 KFHGLTDVAKRYRQRYVDLIVNPEVRDTFRK----RAKITAAIRRHLDQLGYLEVETPVL 222

Query: 170 TASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
             S P GA  R F+          Y L  A + + + ++  GF++ F++   FR+E   +
Sbjct: 223 Q-SEPGGAEARPFVTYHNTLDMELY-LRIATELHLKRMVVGGFEKVFELGRVFRNEGIST 280

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRIC 278
              P EF  ++M  ++ + +D+++  E ++  +  E +    V+           + RI 
Sbjct: 281 RHNP-EFTTIEMYQAYGDYEDMMSLTETMIEQIVVEVTGSKGVTYQGEEISFARPWQRIT 339

Query: 279 YDDAIR 284
             DA+R
Sbjct: 340 MHDAVR 345



 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  GIDR+VM+L  A ++R+   FP+
Sbjct: 475 ALEYGMPPTVGMGIGIDRLVMVLTDAASIRDAIAFPL 511


>gi|313898712|ref|ZP_07832247.1| asparagine--tRNA ligase [Clostridium sp. HGF2]
 gi|312956596|gb|EFR38229.1| asparagine--tRNA ligase [Clostridium sp. HGF2]
          Length = 460

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 67/305 (21%), Positives = 117/305 (38%), Gaps = 51/305 (16%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            D   +V+L GWV   R  G + F+++ D               F  A+ V   ++  + 
Sbjct: 22  QDSMEYVQLQGWVRTNRCSGKLGFIELND------------GTYFRNAQLV---YLQELK 66

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYP-ESIRFKYRFL- 131
                    T  A  +TG+  L+ Q  +   +   E  L    +R+YP +  R  + +L 
Sbjct: 67  NFAEVEKYPTGAAITVTGKFVLTPQGKQPFEIQVTEASLEGDCDRDYPLQKKRHSFEYLR 126

Query: 132 ---DLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRV 186
               LR        + R R + SM      ++  F+   TPI+T +  EGA +    +  
Sbjct: 127 EIAHLRPRANSFYAIFRLRSVLSMAIHEFFQDQGFVYVHTPIITGNDGEGAGEMFKATTR 186

Query: 187 NQGSFY-------ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +   +        A      Q      A  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 187 DDADYEQDFFGKEAFLTVTGQLHVEAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMIEP 246

Query: 240 EMSFVEQDDILNTMEN--------VLRGVFEEFSNGNTV-------------SNNFLRIC 278
           E++F + +D +N +E+        VL    EE    NT+             +++F R+ 
Sbjct: 247 EIAFADLEDDMNLIEDMVKYCIDYVLENAPEEMKFFNTMIDKSCIERITKVRNSDFKRMT 306

Query: 279 YDDAI 283
           Y +AI
Sbjct: 307 YTEAI 311



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 15/89 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  G  R    +V+     ++G++ + ++      R+GG      C    H
Sbjct: 375 DLLVPGVGELVGGSQREERYDVLEARMKDMGMTTDSLQWYMDLRRYGG------C---KH 425

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G   G DR++M L G +N+R+V  FP +
Sbjct: 426 AGFGLGFDRLLMYLTGMQNIRDVEPFPRT 454


>gi|76156709|gb|AAX27860.2| SJCHGC04622 protein [Schistosoma japonicum]
          Length = 180

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI  G  R H    + +  ++  +  E ++        AF+ G PPH G   
Sbjct: 95  YDFFMRGKEIMFGAQRIHDPVFLAERATHHKVDLEKIK----AYIDAFRYGCPPHAGGGI 150

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+ ML LG  N+R+ S+FP
Sbjct: 151 GLERVTMLFLGLDNIRKTSMFP 172


>gi|47208665|emb|CAF88672.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 533

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 100/249 (40%), Gaps = 34/249 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++F+ +RD  G  Q V + D  C             C + L
Sbjct: 103 GQRVKVFGWVHRLRRQGKNLMFIVLRDGTGFLQCVLS-DKLC------------QCYNAL 149

Query: 77  VMSRSAETINANIIT---------GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           V+S  +       +T         G  EL     E++ +A           +    ++  
Sbjct: 150 VLSTESTVALYGTVTPVPEGKQAPGGHELHCDFWELIGLAPAGGADNLLNEDSDVDVQLN 209

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R + +R + + K +  R+ +    R    +  + E + P L  +  EG       +   
Sbjct: 210 NRHMLIRGENVSKILRVRSTVTQCFRDHFFSRGYYEIAPPTLVQTQVEGGSTLFSLNYFG 269

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + ++  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   EF       SFV Q 
Sbjct: 270 EQAY--LTQSSQLYLETCIPALGDT-FCIAQSYRAEQSRTRRHLSEF------RSFVLQV 320

Query: 248 DILNTMENV 256
           D+L  M NV
Sbjct: 321 DVL--MPNV 327


>gi|254228139|ref|ZP_04921568.1| asparaginyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262393921|ref|YP_003285775.1| asparaginyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151939212|gb|EDN58041.1| asparaginyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262337515|gb|ACY51310.1| asparaginyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 472

 Score = 50.8 bits (120), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 70/318 (22%), Positives = 121/318 (38%), Gaps = 65/318 (20%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V          
Sbjct: 22  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYED 69

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 70  EVLKLTTGCSVEVTGKIVESPAKGQDFELAATGVKVVGWVEDAETYPMAKTRH---SIEY 126

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 127 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 186

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y +        L  SG            + +   P FR E+  +
Sbjct: 187 TLDMENLPRTDAGKVDYNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNT 246

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF-----------EEFSN---------- 266
            R   EF+ ++ E++F E DD+    E++L+ VF           E F+           
Sbjct: 247 SRHLAEFWMVEPEVAFAELDDVAKLAEDMLKYVFKAVLEERRDDLEFFAQRIDKEAVSRL 306

Query: 267 GNTVSNNFLRICYDDAIR 284
            N VS++F ++ Y DAI+
Sbjct: 307 ENFVSSDFAQVDYTDAIQ 324


>gi|317181491|dbj|BAJ59275.1| lysyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 501

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFETEGFLEVETPMMHPI-PGGANARPFITYHNALEIERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|124506207|ref|XP_001351701.1| asparagine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23504629|emb|CAD51508.1| asparagine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 1128

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ- 246
           +G    L Q+PQ +KQ+L+ S FD+ ++I  C+R+E   S R   EF  LD+E    +  
Sbjct: 608 EGQNIVLSQSPQLFKQMLINSDFDKVYEINYCYRNEKFHSSRHLNEFMSLDIEKVIYDNY 667

Query: 247 DDILNTMENVLRGV 260
            +I+  M N+L+ +
Sbjct: 668 YEIIIYMYNILKDM 681



 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 28/106 (26%)

Query: 482  YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV-----------------------V 518
            YD +  G EI SG  R H   ++L  F  +  +K++                       +
Sbjct: 1023 YDFIYKGMEIISGSQRIHNLPILL--FKTLKENKQISLSTYLHKKDNFTILNYLDNFQKL 1080

Query: 519  ENRFGGLYR---AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
             N+   +Y+   +FQ    PHGG+A G++R ++ LL   NV+ V+ 
Sbjct: 1081 INKKSTIYKYFNSFQYASKPHGGLALGMERYLITLLNLNNVKNVTF 1126


>gi|296450337|ref|ZP_06892096.1| asparagine--tRNA ligase [Clostridium difficile NAP08]
 gi|296878749|ref|ZP_06902752.1| asparagine--tRNA ligase [Clostridium difficile NAP07]
 gi|296260830|gb|EFH07666.1| asparagine--tRNA ligase [Clostridium difficile NAP08]
 gi|296430256|gb|EFH16100.1| asparagine--tRNA ligase [Clostridium difficile NAP07]
          Length = 465

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 68/325 (20%), Positives = 122/325 (37%), Gaps = 57/325 (17%)

Query: 17  VGSFVRLSGWVH--RVRPHGGIIFLDIRDHYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
           +G  V+++GW+   RV  + G I L+    +   Q+V +     F E+ K   S  +L  
Sbjct: 19  IGKTVKVAGWIRTSRVSKNFGFIELNDGSFFKNMQIVFDEKVENFKEVGKLAISSSILVE 78

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             LV +  A+          +E+ A+ I ++    +   P+  +R   E +R     L  
Sbjct: 79  GELVSTEGAKQ--------PVEIHAKSI-VVEGESDSSYPLQKKRHTLEYLR-TIAHLRP 128

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +T       R+    ++       NF+   +PI+T S  EGA +     R+       
Sbjct: 129 RSNTFSAVFRVRSIAAYAIHKFFQERNFVYAHSPIITGSDCEGAGEMF---RITTMDLND 185

Query: 194 LPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           +P+                       Q    +MA  F   +   P FR E+  + R   E
Sbjct: 186 IPKTEDGKIDYTQDFFGKEANLTVSGQLNAEIMALSFRNVYTFGPTFRAENSYTGRHASE 245

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSN 272
           F+ ++ E+ F + +D +   E++++ V            EF N              V++
Sbjct: 246 FWMIEPEIVFADLEDNMELAEDMIKYVISYVLENAPEEMEFFNSFIDKGLLERLNKIVNS 305

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPI 297
            F+RI Y  A+        D   P+
Sbjct: 306 EFVRITYTKAVELLIESGHDFEYPV 330



 Score = 40.4 bits (93), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G  R    +V+L   + +G+ +E     +       + G   H G   
Sbjct: 380 DLLVPGVGEIVGGSQREEREDVLLDRINEMGLREE----DYWWYLELRKFGTATHSGFGL 435

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +RI+M + G  N+R+V  FP +
Sbjct: 436 GFERIIMYMTGMSNIRDVIPFPRT 459


>gi|297563902|ref|YP_003682875.1| lysyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848351|gb|ADH70369.1| lysyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 500

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 13/98 (13%)

Query: 481 QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           ++DL+  G E+ +G          R  ++   L A      + ++ E+      RA + G
Sbjct: 408 KWDLIGFGMEMGTGYSELVDPVEQRERLTRQSLMAAEGDPEAMQLDED----FLRALEYG 463

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  GIDR++M   G KN+RE  LFP+ +   D
Sbjct: 464 MPPTGGVGVGIDRLLMAFTG-KNIRETVLFPLVKPSGD 500



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 117/264 (44%), Gaps = 27/264 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC---- 72
            G+ V ++G V   R  G + F  +RD  G  Q++ + D    E   + +++  L     
Sbjct: 60  TGAEVSVAGRVMLYRTGGKLCFATLRDETGDIQIMLSLDQVGRERLDAWKADVDLGDHVG 119

Query: 73  IDG-LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
           ++G ++ SR  E    +I+     L+A+ +         PLP   +       R + R++
Sbjct: 120 VEGEVITSRRGEL---SILVTSWTLTAKCLR--------PLPEKHKGLTDPEARVRQRYV 168

Query: 132 DLRRDTLHKNIVKR-TRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQG 189
           DL  +   + +V+R +  I ++R  + + +F+E  TP+L        AR F         
Sbjct: 169 DLIVNPESQQMVRRRSAAIRAIREGLASRDFVEVETPMLMRVHGGATARPFTTHINAYDM 228

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+   + L+  G ++ F++   FR+E   S   P EF  L+   ++ +    
Sbjct: 229 DLY-LRIAPELSLKRLVVGGLEKVFEVNRNFRNEGADSTHNP-EFTMLEFYQAYAD---- 282

Query: 250 LNTMENVLRGVFEEFSN---GNTV 270
            N M ++ R + +E +    G+TV
Sbjct: 283 YNVMADLTRELIQEAARAVFGSTV 306


>gi|78777471|ref|YP_393786.1| lysyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78498011|gb|ABB44551.1| Lysyl-tRNA synthetase, class-2 [Sulfurimonas denitrificans DSM
           1251]
          Length = 504

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 11/246 (4%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           LSG +   R  G   F+ I D   + QV    D    E       + +   D + +S   
Sbjct: 61  LSGRIKLFRIMGKASFIQIEDESNVLQVYVARDHIGEEFYNETFKKNIETGDIVEVS--- 117

Query: 83  ETINANIITGQIELS--AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LH 139
                  +TGQ ELS  A  +++L+ A   PLP        +  R++ R+LDL  +  + 
Sbjct: 118 ---GYPFVTGQGELSLHADNLKLLTKAIS-PLPEKFHGITDKETRYRKRYLDLIMNADVR 173

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           K    R+++I+  R     + F+E  TP++   +        V      G    L  AP+
Sbjct: 174 KTFKVRSKVISLTRRFFEDKGFLEVETPMMHPIAGGANAKPFVTHHNALGIDRYLRIAPE 233

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E   +   P EF  ++   ++    D++   +   R 
Sbjct: 234 LYLKRLIVGGFEAVFEINRNFRNEGMDATHNP-EFTSIEFYWAYKTYKDLIEITKEYFRY 292

Query: 260 VFEEFS 265
           +F+  +
Sbjct: 293 LFDHLN 298



 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GM P  G   GIDR+VMLL    ++R+V LFP
Sbjct: 454 ALSYGMAPTAGQGIGIDRLVMLLTNEHSIRDVLLFP 489


>gi|52425097|ref|YP_088234.1| asparaginyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|59798508|sp|Q65TR1|SYN_MANSM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|52307149|gb|AAU37649.1| AsnS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 467

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 111/276 (40%), Gaps = 40/276 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G + +G  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE 
Sbjct: 13  GRTAIGEKVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIVNYE------SEV 66

Query: 70  VLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRFK 127
           +    G  +  +  T++ +   GQ +EL A+ +E++   E+    P+  +R    SI + 
Sbjct: 67  LRLTTGCSVIVTG-TVSKSPAEGQAVELQAETVEVVGWVEDPDTYPMAAKRH---SIEYL 122

Query: 128 YRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
                LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     R
Sbjct: 123 REVAHLRPRTNIIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEGAGEMF---R 179

Query: 186 VNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDP 225
           V+      LP+  +                    Q      A    + +   P FR E+ 
Sbjct: 180 VSTLDLENLPRDDKGAVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGPTFRAENS 239

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + R   EF+ ++ E++F    D     E++L+ VF
Sbjct: 240 NTTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVF 275


>gi|330807739|ref|YP_004352201.1| lysyl-tRNA synthetase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375847|gb|AEA67197.1| lysyl-tRNA synthetase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 500

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 20/260 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E   +V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRLQVYVNRKTLPEETLAAVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTSVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L T      A+ F           + L  AP+ Y + L+  GF++ F+
Sbjct: 194 MKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRY 286
           V      F+R+   D+I +Y
Sbjct: 312 VFHFGEPFVRLSVFDSILKY 331



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 458 RALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFP 494


>gi|291277327|ref|YP_003517099.1| lysyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964521|emb|CBG40374.1| lysyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 502

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 127/294 (43%), Gaps = 34/294 (11%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G V  +R  G   F+DI D     QV  + +         ++ +++L    L +    
Sbjct: 60  ITGRVKLLRMMGKACFIDIEDESANVQVYVSQND--------LQEQFLLLKKTLEVGDFI 111

Query: 83  ETINANIIT--GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  +T  G++ L A K ++L+ +  +PLP          +R++ R+LDL  +   K
Sbjct: 112 SVYGYPFVTKTGELSLHAIKYQLLTKSI-IPLPEKFHGITDIELRYRQRYLDLIMNKEVK 170

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVP-SRVNQGSFYALPQ 196
              K R++I++++R    ++ F+E  TP+L    P GA  R F+   + +N   F  +  
Sbjct: 171 ETFKLRSKIVSAVRRFFESKGFLEVETPML-HPIPGGANARPFITHHNALNVDRFLRI-- 227

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+  F++   FR+E       P EF  ++   ++    D++   +  
Sbjct: 228 APELYLKRLIVGGFEAVFEMNRNFRNEGMDHSHNP-EFTMIEFYWAYKTYKDLIVLTKEF 286

Query: 257 LRGVFEEFSNGNTVSNN--------FLRICYDDAIRRYGT-------DKPDLRN 295
              + +       +  N        F  I Y DA+ + G        DK  LR+
Sbjct: 287 FTYLLDTLGLPTKIHYNDQEIDFSDFKVIGYKDALEKIGNLPRAVLEDKHSLRD 340



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR++ML  GAK +++V LFP
Sbjct: 451 ALGYGMPPTAGQGIGIDRLIMLFTGAKTIKDVILFP 486


>gi|242239076|ref|YP_002987257.1| asparaginyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242131133|gb|ACS85435.1| asparaginyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 466

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 104/277 (37%), Gaps = 48/277 (17%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RSE 68
           V S V + GWV R R          RD       +A  D +CF   ++V        +SE
Sbjct: 16  VDSEVTVRGWV-RTR----------RDSKAGISFIAVYDGSCFNPLQAVVNNHLDNYQSE 64

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFK 127
            +    G  +  +   + +       EL A  + ++  V +    P+  +R    SI + 
Sbjct: 65  ILRLTTGCSVEVTGNVVESPGEGQSFELQATHVAVVGWVDDPDTYPMAAKRH---SIEYL 121

Query: 128 YRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSR 185
                LR  T     V R R  +     R   +N F   STP++TAS  EGA +     R
Sbjct: 122 REVAHLRPRTNLIGAVARVRHTLAQAIHRFFHQNGFYWVSTPLITASDTEGAGEMF---R 178

Query: 186 VNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDP 225
           V+      LP+                       Q      A    + +   P FR E+ 
Sbjct: 179 VSTLDLENLPRTENGKVDFGEDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENS 238

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            + R   EF+ ++ E++F   DDI    EN+L+ VF+
Sbjct: 239 NTSRHLAEFWMIEPEVAFASLDDIAALAENMLKFVFK 275


>gi|332673025|gb|AEE69842.1| lysine--tRNA ligase [Helicobacter pylori 83]
          Length = 501

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFETEGFLEVETPMMHPI-PGGANARPFITYHNALEIERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|270602102|ref|ZP_06221568.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270318244|gb|EFA29437.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 142

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 5/121 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
           +  + R++++  +R   I++ F+E  TP+L    P GA  R F+          Y L  A
Sbjct: 8   RTFIIRSKVVAGIREYFISKGFMEVETPMLQVI-PGGASARPFVTHHNALDVDMY-LRIA 65

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ +  D+++  E +L
Sbjct: 66  PELYLKRLVVGGFERVFELNRNFRNEGVSVRHNP-EFTMLEYYQAYADYHDLMDNTEELL 124

Query: 258 R 258
           R
Sbjct: 125 R 125


>gi|237730893|ref|ZP_04561374.1| asparaginyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226906432|gb|EEH92350.1| asparaginyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 478

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 108/277 (38%), Gaps = 48/277 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 28  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNQ 75

Query: 76  LVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFK 127
            V+  +  T  + I+TG++  S    Q  EI +   E+   V     YP      SI + 
Sbjct: 76  DVLRLT--TGCSVIVTGKVVASPGQGQSFEIQATEVEVTGWVEDPDTYPMAAKRHSIEYL 133

Query: 128 YRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
                +R  T     V R R  +  ++      + F   STP++TAS  EGA +     R
Sbjct: 134 REVAHMRPRTNMIGAVARVRHTLAQALHRFFHEQGFFWVSTPLITASDTEGAGEMF---R 190

Query: 186 VNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDP 225
           V+      LP+  Q                    Q      A    + +   P FR E+ 
Sbjct: 191 VSTLDLENLPRNDQGKVDFDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENS 250

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            + R   EF+ L+ E++F + +D+    E +L+  F+
Sbjct: 251 NTSRHLAEFWMLEPEVAFADLNDVAGLAEAMLKYAFK 287


>gi|153938311|ref|YP_001389961.1| asparaginyl-tRNA synthetase [Clostridium botulinum F str.
           Langeland]
 gi|166231661|sp|A7GB01|SYN_CLOBL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|152934207|gb|ABS39705.1| asparagine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295318046|gb|ADF98423.1| asparagine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 463

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 121/306 (39%), Gaps = 55/306 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V+++GWV  VR      F+++ D   +   QV+       F+    +     + ++G++ 
Sbjct: 21  VKINGWVRTVRDSKNFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTSVEVEGIIQ 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                T NA       E+ A ++ I   +     P+  +R   E +R       LR  + 
Sbjct: 81  P----TPNAK---QPFEIKATRVSIEGKSS-TDYPLQKKRHTFEYLR---TIAHLRPRSN 129

Query: 139 HKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSRVN 187
             + V R R + +       +   F+  +TPI+T S  EGA +           +P +  
Sbjct: 130 AFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDLNNIP-KTE 188

Query: 188 QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +G       F+  P       QL     A  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 EGKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHASEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNFLRI 277
            EM+F E  D L+  EN+++ V              F  F +        N V+++F RI
Sbjct: 249 PEMAFAELTDYLDNAENMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDNVVNSDFKRI 308

Query: 278 CYDDAI 283
            Y +A+
Sbjct: 309 TYTEAV 314


>gi|296439732|sp|Q5Z3P6|LYSX_NOCFA RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
          Length = 1128

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 103/221 (46%), Gaps = 11/221 (4%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      S  G+ VR+ G + R+R +GG++F  +RD     Q+V + +     +  + 
Sbjct: 674 THTVAAARRSPRGTTVRVCGRLLRIRDYGGVVFALLRDWSDDIQLVIDRE----RVGAAR 729

Query: 66  RSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
            +E+    D G ++  S +   +   +G++ L A    +L      PLP   +       
Sbjct: 730 SAEFGEYFDLGDLIEVSGQIGRSR--SGELSLLAADWRMLGKCLH-PLPDKWKGLADPEA 786

Query: 125 RFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           R + R++D+  +   ++++ KR+ ++ S+R  + +  ++E  TPIL      GA      
Sbjct: 787 RVRQRYVDMAINPETRDVLAKRSAVVRSLRESLNSWGYLEVETPILQQVH-GGANATPFT 845

Query: 184 SRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           + +N       L  AP+ Y + L   G ++ F++   FR+E
Sbjct: 846 THINAYDLDLYLRIAPELYLKRLCVGGMEKVFELGRTFRNE 886



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 13/92 (14%)

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G E+ +           R  ++E  + A +    + E+ E+      +A +  
Sbjct: 1038 RWDLVAWGVELGTAYSELTDPVEQRRRLTEQSVLAANGDPEAMELDED----FLQALEHA 1093

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            MPP GG+  G+DRIVML+ G +++RE   FP+
Sbjct: 1094 MPPTGGLGMGVDRIVMLITG-RSIRETLPFPL 1124


>gi|302530771|ref|ZP_07283113.1| lysyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302439666|gb|EFL11482.1| lysyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 504

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 13/94 (13%)

Query: 479 AFQYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           A ++DL   GFE+A+G          R  ++E    A +    +  + E+      RA +
Sbjct: 412 AEKWDLYVRGFELATGYSELVDPVVERQRLTEQARLAAAGDSEAMRLDED----FLRALE 467

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GMPP GG+  GIDR++M L G   +RE  LFP+
Sbjct: 468 YGMPPSGGVGMGIDRLLMALTGL-GIRETILFPL 500



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 115/268 (42%), Gaps = 20/268 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           + + R    G    +  G  V ++G V  +R  G + F  +R+  G T++ A    A  +
Sbjct: 49  LAQIRAEHSGLEADTSTGQSVGVTGRVMFLRNTGKLCFATLREGDG-TELQAMLSLA--Q 105

Query: 61  IAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +     + W   +D G  +    E I +    G++ + A   +I + A   PLPV   +E
Sbjct: 106 VGPESLAAWKSDVDLGDHVFVHGEVITSK--RGELSVLADSWQIAAKALR-PLPV-AFKE 161

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGA 177
             E  R + R++DL      +++V+ R+ ++ S+R       F E  TP+L T      A
Sbjct: 162 LAEETRIRQRYVDLIMRPRARDVVRTRSGVMRSLRESFHRRGFTEVETPMLQTLHGGAAA 221

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R F+  S       + L  AP+ Y +  +  G ++ F+I   FR+E   S   P EF  L
Sbjct: 222 RPFVTHSNAFDLELF-LRIAPELYLKRCVVGGIEKVFEINRNFRNEGSDSSHSP-EFAML 279

Query: 238 DMEMSFVEQDD--------ILNTMENVL 257
           +   ++   D         I    ENVL
Sbjct: 280 EYYEAYATYDTNAVMTRELIQEAAENVL 307


>gi|269102882|ref|ZP_06155579.1| asparaginyl-tRNA synthetase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268162780|gb|EEZ41276.1| asparaginyl-tRNA synthetase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 466

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 72/321 (22%), Positives = 120/321 (37%), Gaps = 71/321 (22%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF   ++V        +S
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFNPIQAVVPNELNNYQS 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKIVESPAQGQDFELAATDVKVVGWVEDADTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + F   S P++TAS  EGA +     
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGFFWMSAPLITASDCEGAGEMF--- 177

Query: 185 RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDED 224
           RV+      LP   +                    Q      A    + +   P FR E+
Sbjct: 178 RVSTLDLANLPMTDKGDVDFDKDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT----- 269
             + R   EF+ ++ E++F E DD+    E++L+ VF+          EF          
Sbjct: 238 SNTSRHLAEFWMVEPEVAFAELDDVAKLAEDMLKFVFKAVLEERRDDLEFFAQRIDKDAI 297

Query: 270 ------VSNNFLRICYDDAIR 284
                 VS++F ++ Y DAI+
Sbjct: 298 TRLEQFVSSDFAQVDYTDAIK 318


>gi|194476928|ref|YP_002049107.1| lysyl-tRNA synthetase [Paulinella chromatophora]
 gi|171191935|gb|ACB42897.1| lysyl-tRNA synthetase [Paulinella chromatophora]
          Length = 519

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 132/307 (42%), Gaps = 35/307 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V   R  G + F  + D  G+ Q+    + A   I+ S  S     +  LV + 
Sbjct: 53  VAIAGRVMAKRVMGKLAFFTLADETGLIQLYI--EKATLAISMSGDSLAFSHLTSLVDTG 110

Query: 81  SAETINANIIT---GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---- 133
               I   +     G++ +  +K  +L+ +   PLP           R++ R+LDL    
Sbjct: 111 DLIGIYGTLRRTERGELSVRVKKWHMLTKSLH-PLPDKWHGLADVEKRYRQRYLDLIVSP 169

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSF 191
             R+TL +    R ++++ +R  +    F+E  TP+L   +    AR F+          
Sbjct: 170 QTRETLRR----RAQVVSGIRRWLDEREFLEIETPVLHVEAGGAEARPFITQHNTLDLPL 225

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  GF+R +++   FR+E   S   P EF  +++  ++ +  D+++
Sbjct: 226 Y-LRIATELHLKRLVVGGFERVYELGRIFRNEGVSSRHNP-EFTSVEIYQAYADYTDMMD 283

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEHFVH 308
             E ++          +T++N   ++C    I  Y  +  DL  P     MH + +    
Sbjct: 284 LTEQLI----------DTIAN---QVCGTSKI-EYQEEIIDLTPPWRRATMHELVKEATG 329

Query: 309 SEFRVFS 315
            +F +FS
Sbjct: 330 LDFTLFS 336



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 6/57 (10%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM------SQNFCDLLMGSPS 577
           +A + GMPP GG+  GIDR+ MLL  + ++R+V  FP+      +Q      +G+P+
Sbjct: 456 QALEVGMPPTGGLGIGIDRLTMLLTNSPSIRDVIAFPLLKPESQTQTEIRSQLGTPT 512


>gi|161671290|gb|ABX75497.1| asparaginyl-tRNA synthetase [Lycosa singoriensis]
          Length = 249

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 3/139 (2%)

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           ++   R L LR + L K +  R+ ++   R      ++IE + P L  S  EG       
Sbjct: 61  VQLDNRRLMLRGENLSKIVAIRSFLMQCFRSHYFENHYIEVTPPTLVQSQVEGGSTLFKL 120

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               Q ++  L Q+ Q Y + ++ S  D  F IA  +R E  R+ R   E+  ++ E  F
Sbjct: 121 DFFGQEAY--LTQSSQLYLETVIPSLGD-VFCIAMSYRAEQSRTRRHVAEYTHIEAECPF 177

Query: 244 VEQDDILNTMENVLRGVFE 262
           +  +D+L+ +E+++  V +
Sbjct: 178 ITFNDLLDRLEDLICDVVD 196


>gi|269957752|ref|YP_003327541.1| lysyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269306433|gb|ACZ31983.1| lysyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 504

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 6/162 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           PLPV   ++  E  R + R++DL      +++V+ R  ++ S+R      +FIE  TP+L
Sbjct: 152 PLPVL-HKDLSEESRVRQRYVDLIARPAARDMVRLRADVVRSLRENFHRRDFIEVETPML 210

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T +S   AR F           + +  AP+ + +  +  G +R F+I   FR+E   S 
Sbjct: 211 QTIASGATARPFTTHMNAYDMELF-MRIAPELFLKRAVVGGVERVFEINRNFRNEGADST 269

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
             P EF  L+   ++ + + I    +N+++   +E   G TV
Sbjct: 270 HSP-EFAMLEAYEAYGDYNTIGALTQNLVQTAAQEVL-GTTV 309



 Score = 40.4 bits (93), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 13/92 (14%)

Query: 481 QYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           ++DL   GFE+A+G          R       L A +    +  + E+       A +  
Sbjct: 413 KWDLYVRGFELATGYSELVDPVIQRERFEAQALLAAAGDDEAMRIDED----FLVAMEHA 468

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           MPP GG+  G+DR++M L G   +RE  LFP+
Sbjct: 469 MPPTGGMGMGLDRLLMALTGL-GIRETILFPL 499


>gi|189424973|ref|YP_001952150.1| tRNA synthetase class II (D K and N) [Geobacter lovleyi SZ]
 gi|189421232|gb|ACD95630.1| tRNA synthetase class II (D K and N) [Geobacter lovleyi SZ]
          Length = 302

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 145 RTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
           R +++ ++R       F+E  TP  + A++PE   +F+ P  V   + + L  +P+   +
Sbjct: 10  RAQVLQTIRRFFTERGFLEVETPFRIPANAPE---EFIDP--VPALASWQLQTSPEICMK 64

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            L+  G+D+ FQI  C+R  D R  R   EF  L+   S  +  D++     +LR V + 
Sbjct: 65  RLLCRGYDKIFQICRCWR-ADERGSRHLTEFTMLEWYRSNADYRDLMQDCVGLLRQVADT 123

Query: 264 FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS--VN 321
            S G     N L+I  +     +   +  LR         +  V ++  +F ++L+  + 
Sbjct: 124 CSEGACFKRNDLKIDPNQTWLHFSVQEAFLR-----FAKDDALVSAQNGLFEELLTDRIE 178

Query: 322 PGYEVWAIP 330
           P  E + +P
Sbjct: 179 PALEKFEVP 187


>gi|308182356|ref|YP_003926483.1| lysyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308064541|gb|ADO06433.1| lysyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 501

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFEMEGFLEVETPMMHPI-PGGANARPFITYHNALEVERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|197294580|ref|YP_001799121.1| Lysyl-tRNA synthetase (class II) [Candidatus Phytoplasma
           australiense]
 gi|226736752|sp|B1VA97|SYK_PHYAS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|171853907|emb|CAM11870.1| Lysyl-tRNA synthetase (class II) [Candidatus Phytoplasma
           australiense]
          Length = 497

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP GG+  GIDRIVMLL    N+R+V LFP
Sbjct: 451 ALSYGMPPTGGLGMGIDRIVMLLTDTPNIRDVILFP 486



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 116/282 (41%), Gaps = 34/282 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVM 78
           V+++G +   R  G   FL ++D     QV    D     F + ++     ++ I G + 
Sbjct: 59  VKIAGRIILKRGQGKAGFLHLQDFNFKIQVYLRSDLLGDAFLLYQNCDLGDIVGIKGFLF 118

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEEL-PLP-VFGEREYPESIRFKYRFLDLRRD 136
                       T   EL+ + ++ + + + L PLP  F   +  E +R K R+LDL  +
Sbjct: 119 K-----------TKTKELTIKALDFIHLTKSLKPLPDKFHGLQNREEMR-KKRYLDLMVN 166

Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYAL 194
              + + + R+ II S+R     E F+E  TPIL  S     A+ F+         FY  
Sbjct: 167 EKSRQVFLTRSLIIKSIRNFFDNEGFLEVETPILQPSLGGASAKPFITSHNALNSDFYLR 226

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
                  K+L++  G  + ++I   FR+E   +   P EF  ++   ++    DI   ME
Sbjct: 227 IATELPLKKLIVG-GMPKVYEIGRIFRNEGMDATHNP-EFSTIEAYQAY---SDIQGMME 281

Query: 255 -----------NVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
                       VL+ +   + N       F +I   DAI++
Sbjct: 282 LTQKCLQYICQTVLKSLEINYQNKKISFQTFQKISMTDAIKK 323


>gi|331703087|ref|YP_004399774.1| asparagine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|256384162|gb|ACU78732.1| asparagine--tRNA ligase [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|256384994|gb|ACU79563.1| asparagine--tRNA ligase [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|296455315|gb|ADH21550.1| asparagine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
 gi|328801642|emb|CBW53795.1| Asparagine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 454

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 110/252 (43%), Gaps = 24/252 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + G V   R    + F+ + D    T  QVV    +  +E A   R   ++ + G V+
Sbjct: 18  VEILGRVRSNRQGKFVSFMILNDGTTFTDLQVVYKTKTKGYEQALQARVSSIVKVIGRVV 77

Query: 79  SRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
               +         + EL A +IE++  A E+ PL     ++   +  +      LR  T
Sbjct: 78  LTPEKQ-------QKFELQADEIELIDQAIEDYPL-----QKKEHTTEYLREIAHLRAKT 125

Query: 138 LHKNIVKRTRIINSMRC-RMIAE-NFIECSTPILTASSPEGARD-FLVPSRVN---QGSF 191
              N + + R   +    R   E NF+   +PI+T++  EGA + FLV +R +   +  F
Sbjct: 126 KTFNAIFKIRSAAAYAIHRFFNERNFVYIHSPIITSNDAEGAGEAFLVTTREDADYEKDF 185

Query: 192 YALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           +    +     QL     A  F + +   P FR E+  + +   EF+ ++ E++F +  D
Sbjct: 186 FGKKASLTVSGQLHAEAFAQAFKKVYTFGPTFRAENSNTAKHAAEFWMIEPEVAFADLKD 245

Query: 249 ILNTMENVLRGV 260
            +  ++++++ +
Sbjct: 246 NIQLIQDMVKYI 257


>gi|170587862|ref|XP_001898693.1| Asparaginyl-tRNA synthetase, cytoplasmic [Brugia malayi]
 gi|158593963|gb|EDP32557.1| Asparaginyl-tRNA synthetase, cytoplasmic, putative [Brugia malayi]
          Length = 548

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 107/281 (38%), Gaps = 26/281 (9%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV-- 77
           V + GW+HR+R  G  ++F  +RD  G  QV+          A +V +E  + I G +  
Sbjct: 127 VCIKGWIHRMRRQGKSLMFFILRDGTGFLQVLLMDKLCQTYDALTVNTECTVEIYGAIKE 186

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    E  N +      EL A   +I+  A    +      E         R L +R + 
Sbjct: 187 VPEGKEAPNGH------ELIADFWKIIGNAPPGGIDNVLNEEASVDKMLDNRHLVIRGEN 240

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R     +MR       ++E + P L  +  EG           + SF  L Q+
Sbjct: 241 AAALLRLRAAATRAMREHFYNAGYLEVAPPTLVQTQVEGGSTLFNLDYFGEQSF--LTQS 298

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+  DD++  +E ++
Sbjct: 299 SQLYLETCIPTLGD-VFCIAQSYRAEKSRTRRHLAEYAHVEAECPFITLDDLMEKIEELV 357

Query: 258 RGVFEEFSNGNTVSN--------------NFLRICYDDAIR 284
               +                         FLR+ Y DAI+
Sbjct: 358 CDTVDRLLADEEAKKLLEHINPKFQPPERPFLRMEYKDAIK 398


>gi|322804910|emb|CBZ02469.1| asparaginyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 463

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 121/306 (39%), Gaps = 55/306 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V+++GWV  VR      F+++ D   +   QV+       F+    +     + ++G++ 
Sbjct: 21  VKINGWVRTVRDSKNFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTSVEVEGIIQ 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                T NA       E+ A ++ I   +     P+  +R   E +R       LR  + 
Sbjct: 81  P----TPNAK---QPFEIKATRVSIEGKSS-TDYPLQKKRHTFEYLR---TIAHLRPRSN 129

Query: 139 HKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSRVN 187
             + V R R + +       +   F+  +TPI+T S  EGA +           +P +  
Sbjct: 130 AFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDLNNIP-KTE 188

Query: 188 QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +G       F+  P       QL     A  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 EGKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHASEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNFLRI 277
            EM+F E  D L+  E++++ V              F  F +        N V++NF RI
Sbjct: 249 PEMAFAELTDYLDNAEDMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDNVVNSNFKRI 308

Query: 278 CYDDAI 283
            Y +A+
Sbjct: 309 TYTEAV 314


>gi|261839046|gb|ACX98811.1| lysyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 501

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFETEGFLEVETPMMHPI-PGGANARPFITYHNALEIERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|257064642|ref|YP_003144314.1| lysyl-tRNA synthetase (class II) [Slackia heliotrinireducens DSM
           20476]
 gi|256792295|gb|ACV22965.1| lysyl-tRNA synthetase (class II) [Slackia heliotrinireducens DSM
           20476]
          Length = 499

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VMLL  +  +R+V LFP
Sbjct: 457 RALEYGMPPAGGVGLGIDRLVMLLTDSATIRDVLLFP 493



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 20/213 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS----EWVLCIDGL 76
           V+++G +  +R  G I F+ +RD     Q+    +    E  + V++    +WV     +
Sbjct: 64  VKVAGRIMAIRNQGKIAFVVVRDATADIQLFCRINVLGEEAYEEVKNLDVGDWVGAEGTV 123

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           + +R           GQ+ +S  ++ +LS +   PLP        +  R++ R++DL  +
Sbjct: 124 IRTRR----------GQLSVSPTEVRLLSKSIR-PLPEKFHGLADKETRYRQRYVDLVMN 172

Query: 137 -TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
             + +   KR +I+ ++R  M  + F    TP+L +      A+ F+         FY  
Sbjct: 173 PDVRETFEKRFKILAAIRRYMEGQGFYAVETPMLHSIMGGANAKPFVTHHNALDIDFYLR 232

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDE--DP 225
                  K+LL+  GF+R +++   FR+E  DP
Sbjct: 233 IATELPLKRLLVG-GFERVYEMGRIFRNEGMDP 264


>gi|126662967|ref|ZP_01733965.1| asparagine--tRNA ligase [Flavobacteria bacterium BAL38]
 gi|126624625|gb|EAZ95315.1| asparagine--tRNA ligase [Flavobacteria bacterium BAL38]
          Length = 481

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 108/262 (41%), Gaps = 36/262 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG-LVMS 79
           V   GWV   R +  I   D    + I Q V + ++   E  K + +   +C+ G L  S
Sbjct: 19  VTTKGWVRTFRNNQFIALNDGSTIHNI-QCVVDFENTPEETLKRITTGAAICVTGTLAES 77

Query: 80  RSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           R A         GQ +E+   K+E+L  ++    P+  ++   E +R +   L +R +T 
Sbjct: 78  RGA---------GQNVEIQVTKLEVLGDSDAEKFPMQPKKHSLEFLR-ENAHLRVRTNTF 127

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
              +  R+ +  ++      + F+  +TPI+T S  EGA +     +V    F   P+  
Sbjct: 128 GAIMRVRSVLSFAVHQYFQEKGFVYVNTPIITGSDAEGAGEMF---KVTALPFDGTPRTE 184

Query: 199 Q--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +                    Q +    A    + +   P FR E+  + R   EF+ ++
Sbjct: 185 EGKVNFKEDFFGKETNLTVSGQLEAETYAMALGQVYTFGPTFRAENSNTSRHLAEFWMIE 244

Query: 239 MEMSFVEQDDILNTMENVLRGV 260
            E++F +  D ++  E+ ++ V
Sbjct: 245 PEVAFNDLADNMDLAEDFIKYV 266


>gi|317405232|gb|EFV85570.1| lysyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 507

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 111/245 (45%), Gaps = 21/245 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V+++G +   R  G   F  ++D  G  Q+  +  +   E + +   +W    ++ ++G 
Sbjct: 67  VKVAGRMMLKRVMGKASFATLQDSTGRIQIYLDRGT-LGEDSYAAFKQWDIGDIIAVEGS 125

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           V   +          G++ + A    +LS +   PLP        + +R++ R++DL   
Sbjct: 126 VFKTN---------KGELSVHAATARLLSKSLR-PLPDKFHGVADQELRYRQRYVDLIMT 175

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           D   +    R++ + S+R  M+   F+E  TP+L    P GA  + F+          + 
Sbjct: 176 DATRRTFEARSKAMGSIRQFMLNAGFLEVETPMLH-PIPGGAAAKPFVTHHNALDMEMF- 233

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   +F +   +++  
Sbjct: 234 LRIAPELYLKRLIVGGFERVFEVNRNFRNEGV-SPRHNPEFTMMEFYAAFADYRWLMDFT 292

Query: 254 ENVLR 258
           E ++R
Sbjct: 293 EELIR 297



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E   + F +   +K+  +     +   Y RA + GMPP 
Sbjct: 415 RFELFMTGREIANGFSELNDPEDQAERFRSQVEAKDAGDEEAMYYDADYIRALEYGMPPT 474

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 475 GGCGIGIDRLVMLLTDSPSIRDVILFP 501


>gi|162448223|ref|YP_001621355.1| lysyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|161986330|gb|ABX81979.1| lysyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 495

 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 27/39 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + GMPP GGI  GIDR +MLL    N+R+V LFP ++
Sbjct: 453 ALEYGMPPTGGIGIGIDRFIMLLTNTPNIRDVILFPHAR 491



 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 123/304 (40%), Gaps = 28/304 (9%)

Query: 2   HRY-RTHSCGDLGVSDVGSFVR-----------LSGWVHRVRPHGGIIFLDIRDHYGITQ 49
           HR+ RTH   ++  +  GS  R           ++G +   R  G   F+ ++D  G  Q
Sbjct: 30  HRFDRTHLSNEIHTT-YGSLTREELEAKEVHVIIAGRIVLRRTQGKAGFIQLQDKEGRIQ 88

Query: 50  VVANPDSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV 106
           V    D+     FE+ K      ++ I G++     + +           +++ + +   
Sbjct: 89  VYVRLDAVGEFQFELFKHSDLGDIVGIKGVLFRTKTDELTVK--------ASEFVHLTKA 140

Query: 107 AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
              LP    G ++  E+ R +Y  L +  D++ +    R RII + +    +  FIE  T
Sbjct: 141 ITPLPDKFHGLQDKEEARRRRYVDLIVNEDSM-RVARTRPRIIRAFQHYFDSNGFIEVET 199

Query: 167 PILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           P+L        AR F+         FY L  A +   + L+  G +R ++I   FR+E  
Sbjct: 200 PVLHPILGGAAARPFVTHHNTLDMDFY-LRIATELPLKRLIVGGMERVYEIGRLFRNEGI 258

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            +   P EF  ++   +F +  D++  +E+ L  V  E +    V  N   I   D  R 
Sbjct: 259 SAKHNP-EFTTVEAYQAFGDVTDMMKLVEDCLSSVAFEVNGSYDVVFNDQTIHLKDFKRA 317

Query: 286 YGTD 289
           +  D
Sbjct: 318 HMVD 321


>gi|209877783|ref|XP_002140333.1| lysyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
 gi|209555939|gb|EEA05984.1| lysyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
          Length = 557

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 7/175 (4%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           G++ L  + I +LS     LP  + G ++  + IR++ R+LDL  +   + + K R+R +
Sbjct: 158 GELSLFIKSILLLSPCYHMLPTAISGLKD--QEIRYRQRYLDLILNEDSRRVFKLRSRAL 215

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R        +E  TP++    S   AR F+          Y +  AP+ Y + L+  
Sbjct: 216 KFIRNFFDNLGCLEVETPMMNLIYSGASARPFITYHNELNTQLY-MRIAPEIYLKQLVIG 274

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           GFDR ++I   FR+E       P EF  +++ +++ +  D+++  E ++ G+  E
Sbjct: 275 GFDRVYEIGKNFRNEGIDLTHNP-EFTAVEVYIAYADYYDLMDMTEELISGLIME 328



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           A + G+PP GG   G+DR++MLL    N++EV LFP  +       G    +SVE
Sbjct: 498 ALEHGLPPTGGWGLGVDRLIMLLANKNNIKEVVLFPAMKPIKQNNQGHHDDLSVE 552


>gi|169350983|ref|ZP_02867921.1| hypothetical protein CLOSPI_01760 [Clostridium spiroforme DSM 1552]
 gi|169292045|gb|EDS74178.1| hypothetical protein CLOSPI_01760 [Clostridium spiroforme DSM 1552]
          Length = 461

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 21/251 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPD--SACFEIAKSVRSEWVLCID 74
            +V L GWV   R  G + F+ + D  ++   Q+V          EI K      +  + 
Sbjct: 26  EYVELEGWVRTNRNSGKLGFIALNDGTYFKNLQIVYTEQGIDNYAEIDKLSTGSAIRVVG 85

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            L ++   +           E+ A +IEI    +E   P+  +R   E +R +   L  R
Sbjct: 86  KLKLTPEGKQ--------PFEVEATEIEIEGRCDE-DFPLQKKRHSFEYMR-EIPHLRPR 135

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY-- 192
            +T +     R+ +  ++     ++ F+   TPI+T++  EGA +    + ++  +F   
Sbjct: 136 ANTFYAIFRLRSVLSMAIHEFFQSQGFVYVHTPIITSNDGEGAGEMFRATTIDGTNFEDD 195

Query: 193 -----ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
                A      Q      A  F   +   P FR E+  + R   EF+ ++ E++F + +
Sbjct: 196 FFEKEAFLTVTGQLHVEAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMIEPEIAFADLE 255

Query: 248 DILNTMENVLR 258
           D ++ +E++++
Sbjct: 256 DDMDLIEDMVK 266


>gi|240949702|ref|ZP_04754037.1| asparaginyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240295960|gb|EER46636.1| asparaginyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 467

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 135/333 (40%), Gaps = 65/333 (19%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSA 57
           M ++ T S    G   VG  + + GWV   R    G+ FL + D   +   Q + N D A
Sbjct: 1   MSKFPTISEVLSGKVAVGEEISVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDLA 60

Query: 58  CF--EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLP 113
            +  E+ + + +   + + G+++   AE        GQ +EL A+ +E++   E+    P
Sbjct: 61  NYQDEVLR-LTAGCSVIVTGVIVESPAE--------GQAVELQAKSVEVVGWVEDPDTYP 111

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTA 171
           +  +R    SI +      LR  T     V R R  +  ++      + F   +TP++TA
Sbjct: 112 MAAKRH---SIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITA 168

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQA-------PQQY---KQLLMASG----------FD 211
           S  EGA +     RV+      LP+         Q +   +  L  SG            
Sbjct: 169 SDTEGAGEMF---RVSTLDLENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACALS 225

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF----EEFSNG 267
           + +   P FR E+  + R   EF+ ++ E +F    D     E++L+ VF    EE  + 
Sbjct: 226 KVYTFGPTFRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFHAVLEERKDD 285

Query: 268 -----------------NTVSNNFLRICYDDAI 283
                            N ++++F +I Y DAI
Sbjct: 286 LKFFEKHVDNTVISRLENFINSDFAQIDYTDAI 318


>gi|284928615|ref|YP_003421137.1| asparaginyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809074|gb|ADB94779.1| asparaginyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 463

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 112/287 (39%), Gaps = 50/287 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + + GWV   R      F+++ D   +   QV+ +   + +E         +L   G  +
Sbjct: 19  ILIQGWVRTKRELKDFTFIEVNDGSSLKNLQVILDKTISNYE------ETLMLLNTGSSL 72

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
             S   + +      +EL A  +++   +     P+  +R   E +R     L  R +TL
Sbjct: 73  EVSGILVTSPGKNQSLELKANTVKVYGNSNPETYPLQKKRHSFEFLR-TIGHLRHRTNTL 131

Query: 139 HKNIVKRTRIINSMRCRMIAENFIE------CSTPILTASSPEGARDFL---------VP 183
              I    RI NS  C M   NF +       +TPI+T +  EGA D           +P
Sbjct: 132 GAVI----RIRNS--CTMAIHNFFQEKGFLLINTPIITVNDCEGAGDLFKITNFDLCNIP 185

Query: 184 S------RVNQGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                    NQ  F+  P       Q +  +MA  F   +   P FR E+  + R   EF
Sbjct: 186 KDKRGNVEYNQ-DFFGKPAYLTVSGQLEAEVMAMTFQNVYTFGPTFRAENSNTSRHLAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
           + ++ EM+F + +   +  E  L+ VF+          N L+ C +D
Sbjct: 245 WMVEPEMAFCDLEGNQDVAEEFLKYVFK----------NVLKNCPED 281


>gi|169624345|ref|XP_001805578.1| hypothetical protein SNOG_15430 [Phaeosphaeria nodorum SN15]
 gi|111055975|gb|EAT77095.1| hypothetical protein SNOG_15430 [Phaeosphaeria nodorum SN15]
          Length = 489

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 2/84 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSN--VGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +D +  G EI SG  R +    + +A S    G   +    ++     AF+ GMP HGG 
Sbjct: 398 WDTIVRGREICSGSQRINSFNELCEAMSAGVCGPPLDPKAEKWQSYLTAFRTGMPRHGGC 457

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             G++R++   LG  +VRE +LFP
Sbjct: 458 GLGVNRLLQGFLGLDDVREATLFP 481



 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 26/218 (11%)

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLV--MSRSAETINA--NIITGQIELSAQKIEILSV 106
           V +  S+ ++ AK +  E ++C+ G      R    +++  + +T   EL    I ++++
Sbjct: 70  VTSVKSSEWKDAKEITRESLICVTGRFEPTKRHGHYMDSQDDTLTLSRELYVTGINVIAL 129

Query: 107 AE-ELPLPVFGEREYPE-SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE----- 159
           A  ++ LP   +  +P    +   R +D+R       ++ +   ++S  C++I E     
Sbjct: 130 ASPDILLP--QQDRFPSLEEQLNNRIIDVRHAA--SGVIFK---LHSGMCQLIVEFLCSN 182

Query: 160 NFIECSTP-ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
            F    TP I+TA+ P     F +P     G    L Q+ Q +KQ+ ++    R F+I P
Sbjct: 183 GFYWIHTPRIITATIPGDNEYFHLPYF---GRDAWLSQSSQHHKQMALSMDMQRVFEIGP 239

Query: 219 CFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            FR E     S R   EF  LD+ M F  Q+D    ME
Sbjct: 240 VFRAEVKSCESSRHLTEFTVLDVGMVF--QNDYHEVME 275


>gi|94676681|ref|YP_588851.1| asparaginyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|122988112|sp|Q1LT63|SYN_BAUCH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|94219831|gb|ABF13990.1| asparaginyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 467

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 75/335 (22%), Positives = 127/335 (37%), Gaps = 66/335 (19%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V + GWV   R    GI FL I D   +   QV+ N D   +      +S+ +    G  
Sbjct: 21  VIVQGWVRTRRDSKAGISFLSIYDGSCLDSLQVIINHDLPNY------KSDVLHLTTGCS 74

Query: 78  MSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +  +   + +  +    E+ A+ I++L  V      P+  ++    S+ F      LR  
Sbjct: 75  VVITGSIVTSIGVGQHFEIQAKNIKVLGWVKNPETYPITAKKH---SLEFLREVAHLRPR 131

Query: 137 TLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           T     V R R  +  ++   M  E F   STP++T  + EGA +    S ++  +    
Sbjct: 132 TNIIGAVTRVRHTLAQAIHRFMHIEGFFWVSTPLITTFNCEGAGEMFRVSTLDLENLPYT 191

Query: 195 PQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +    Y++        L  SG            + +   P FR E+  + R   EF+ +
Sbjct: 192 SKGKINYEKDFFGKEAFLTVSGQLNGESYACALSKIYTFGPTFRAENSNTSRHLAEFWMV 251

Query: 238 DMEMSFVEQDDILNTMENVLRGVFE--------------EFSNGNT-------VSNNFLR 276
           + E++F    DI    E +L+ +F               E  N N        +S+NF +
Sbjct: 252 EPEVAFANLTDIAILAEKMLKYIFNAILIERVDDINFFAEQINKNIIKRLEQFISSNFAQ 311

Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
           I Y +AI              I+ N  + F H+ F
Sbjct: 312 IDYTEAID-------------ILQNCKQKFDHTVF 333


>gi|71028924|ref|XP_764105.1| lysyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68351059|gb|EAN31822.1| lysyl-tRNA synthetase, putative [Theileria parva]
          Length = 708

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 14/208 (6%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIIN 150
           G+I +  ++I+ LS    +P P           R++ R LDL  + L +  ++KR +II 
Sbjct: 323 GEISIIPKRIKFLSKCL-IPPPSKQHGLKDIETRYRLRHLDLLTNELSRYQVLKRFQIIA 381

Query: 151 SMRCRMIAENFIECSTPILTA-SSPEGARDF-LVPSRVNQGSFYALPQAPQ-QYKQLLMA 207
            +R  +    F+E  TPIL   +S + A  F     R+N+     L  AP+   K++ M 
Sbjct: 382 KIRRFLCERGFVEVDTPILNHYTSGDLAEPFETYYKRLNEK--VKLRIAPEFSIKKIFMG 439

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
               + F+I  CFR+E   S R   EF  +++     + + ++  +E+++  +     N 
Sbjct: 440 LPLTKVFEIGKCFRNEGS-SLRHSPEFTMIEIYQKMADYNTMIKLLEDLINSLLSYGFND 498

Query: 268 NTVSNNFL-----RICYDDAIRRY-GTD 289
           + V +N       R  + D I+ Y G D
Sbjct: 499 DAVCDNVFEVKWRRAKFSDLIKEYTGVD 526



 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 8/74 (10%)

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
           CN  +++   + + +SEV         + KE +   F        CGM P  G+  G+DR
Sbjct: 634 CNPLKLSKSVLDSEISEVKDNNLKGKEVDKEFLNAAF--------CGMEPMAGLGIGVDR 685

Query: 546 IVMLLLGAKNVREV 559
           ++M +  AKN++E+
Sbjct: 686 LIMYITKAKNIKEI 699


>gi|126174140|ref|YP_001050289.1| asparaginyl-tRNA synthetase [Shewanella baltica OS155]
 gi|304411318|ref|ZP_07392932.1| asparaginyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307305360|ref|ZP_07585108.1| asparaginyl-tRNA synthetase [Shewanella baltica BA175]
 gi|166231673|sp|A3D3V7|SYN_SHEB5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|125997345|gb|ABN61420.1| asparaginyl-tRNA synthetase [Shewanella baltica OS155]
 gi|304350173|gb|EFM14577.1| asparaginyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306911663|gb|EFN42088.1| asparaginyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 466

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 106/280 (37%), Gaps = 48/280 (17%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    GI FL + D             +CF   + V    + 
Sbjct: 12  GEHAVGSKVTVRGWVRTRRDSKAGISFLAVYD------------GSCFNPIQGVVPNSLD 59

Query: 72  CIDGLVMSRSAETINANIITGQI----------ELSAQKIEILS-VAEELPLPVFGEREY 120
             D  V+  +A    + ++TG +          EL    IE+   V +    P+  +R  
Sbjct: 60  NYDNEVLKLTAGC--SVVMTGDVVESPGAGQAFELQVTDIEVAGWVDDPDTYPMAAKRHS 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGAR 178
            E +R       LR  T     V R R  +  ++      E FI  STP++TAS  EGA 
Sbjct: 118 IEHLR---ELAHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAG 174

Query: 179 DFLVPS--------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           +    S        R + G       F+   A      Q      A    + +   P FR
Sbjct: 175 EMFRVSTLDMENLPRTDAGKVDYDKDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFR 234

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            E+  + R   EF+ ++ E++F   +DI    E +L+  F
Sbjct: 235 AENSNTSRHLAEFWMVEPEVAFANLNDIAGLAEAMLKYAF 274


>gi|91784240|ref|YP_559446.1| lysyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|122970323|sp|Q13WZ5|SYK_BURXL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|91688194|gb|ABE31394.1| Lysyl-tRNA synthetase, class-2 [Burkholderia xenovorans LB400]
          Length = 513

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 129/306 (42%), Gaps = 28/306 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  +RD  G  Q    P     E   + + +W +    +V +R
Sbjct: 73  VAIAGRMMLKRVMGKASFATVRDGSGQIQFFITPADVGQETYDAFK-KWDMG--DIVAAR 129

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-RRDTL 138
                     T + ELS +  E+  +++ L PLP        + ++++ R++DL      
Sbjct: 130 -----GVLFRTNKGELSVRCTELRLLSKSLRPLPDKFHGLSDQEMKYRQRYVDLIVTPET 184

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            K  V RT+ I+S+R  M   +F+E  TP+L        A+ F           + L  A
Sbjct: 185 RKTFVARTKAISSIRKFMADADFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMF-LRIA 243

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E ++
Sbjct: 244 PELYLKRLVVGGFERVFEINRNFRNEG-VSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLI 302

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           R    +     T++           F R+    AI++Y    P   N  +  +    F+ 
Sbjct: 303 RQAAIDALGTATITYQGRELDLAKPFHRLTITQAIQKYA---PQYTNEQLADSA---FLR 356

Query: 309 SEFRVF 314
           +E + F
Sbjct: 357 TELKKF 362



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     +   Y RA + GMPP 
Sbjct: 421 RFELFITGREIANGFSELNDPEDQAARFRKQVDQKDAGDEEAMFYDADYIRALEYGMPPA 480

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 481 GGCGIGIDRLVMLLTDSPSIRDVILFP 507


>gi|113460899|ref|YP_718966.1| asparaginyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123031243|sp|Q0I2M9|SYN_HAES1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|112822942|gb|ABI25031.1| asparaginyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 467

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 109/279 (39%), Gaps = 36/279 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIA-KSVRSE 68
           G   VG  V + GW+   R    G+ FL I D   +   Q + N D   +E     + + 
Sbjct: 13  GKITVGETVTVRGWIRTRRDSKAGLSFLAIYDGSCFDPIQAIVNNDIENYETEILRLTTG 72

Query: 69  WVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILS-VAEELPLPVFGEREYPESIRF 126
             + + G +    AE        GQ +EL A KIE+   V +    P+  +R    SI +
Sbjct: 73  CSVVVTGKIAESPAE--------GQAVELQANKIEVSGWVDDPETYPMSAKRH---SIEY 121

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + F   +TP++TAS  EGA +    S
Sbjct: 122 LREVAHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVS 181

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     +    + Q        L  SG            + +   P FR E+  +
Sbjct: 182 TLDLENLPRTDKGAVDFSQDFFGKESFLTVSGQLNGESYACALSKIYTFGPTFRAENSNT 241

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
            R   EF+ ++ E++F    D     E++L+ VF    N
Sbjct: 242 TRHLAEFWMVEPEIAFATLADNAKLAEDMLKYVFRAVLN 280


>gi|302384563|ref|YP_003820385.1| asparaginyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302195191|gb|ADL02762.1| asparaginyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 463

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 109/266 (40%), Gaps = 30/266 (11%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVL 71
           S + S V + GWV  +R      F+ + D  ++   Q+V +     F EI+K      ++
Sbjct: 15  SLLNSQVTVGGWVRSLRDSKAFGFIVLNDGTYFETLQIVYHNTMDNFSEISKLNVGAAII 74

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
               LV +  A+           E+ A+KI +   A     P+  +R   E +R     L
Sbjct: 75  VTGTLVATPDAKQ--------PFEIQAEKITVEG-ASAPDYPLQKKRHSFEYLR-TISHL 124

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPS------ 184
             R +T       R+ I  ++       +F+   TPI+T S  EGA + F V +      
Sbjct: 125 RPRTNTFQAVFRVRSLIAYAIHQFFQERDFVYVHTPIITGSDCEGAGEMFQVTTLDLTNI 184

Query: 185 -RVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            +  +G+      F+  P       QL     A  F   +   P FR E+  + R   EF
Sbjct: 185 PKTEEGAVDFTQDFFGKPTNLTVSGQLNGETYAMAFRNIYTFGPTFRAENSNTTRHAAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGV 260
           + ++ EM+F +  D +   E++L+ V
Sbjct: 245 WMIEPEMAFADLSDNMELAESMLKYV 270



 Score = 40.4 bits (93), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + ++     +G+ KE  +  F    R F  G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDYDKLVARMDELGLRKE--DYDFYLDLRKF--GSTRHAGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMSNIRDVVPFPRTVNNCEL 463


>gi|220905534|ref|YP_002480846.1| asparaginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869833|gb|ACL50168.1| asparaginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 454

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 100/255 (39%), Gaps = 27/255 (10%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           L GW+   R      F++I D   +  +    D+                  G  +  + 
Sbjct: 21  LCGWIRTRRDAKDFSFVEINDGSCLANMQCIVDAGT-----PAHQGLGDAATGAAVRVTG 75

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
           E +++     Q E+ A  +++  +A+    P+  +R   E +R       LR  T     
Sbjct: 76  ELVSSPGKGQQWEVRAHDVQVYGLADPENFPLQKKRHSDEFLR---TIAHLRPRTNKYGA 132

Query: 143 VKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS------ 190
           V R R      + +  R R     F    TP+LT +  EGA +    + +  G+      
Sbjct: 133 VFRIRSEAGFAVHDFFRSR----RFAWVHTPVLTGADCEGAGEMFRVTTLEPGAKNLDQD 188

Query: 191 FYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           F++         Q +   +A+G  R +   P FR E+  + R   EF+ ++ EM+F + +
Sbjct: 189 FFSRQCNLTVSGQLEAEALATGLGRVYSFGPTFRAENSNTPRHAAEFWMIEPEMAFADLE 248

Query: 248 DILNTMENVLRGVFE 262
           D++   E + R V +
Sbjct: 249 DLMELGEGLTRHVVD 263


>gi|269219313|ref|ZP_06163167.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211460|gb|EEZ77800.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 1167

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 13/93 (13%)

Query: 479  AFQYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           R  ++E  L+A +    + EV E        A +
Sbjct: 1070 AERWDLVAFGMELGTAYTELTDPVDQRQRLTEQSLRAAAGDPEAMEVDEE----FLSALE 1125

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             GMPP GG+  GIDRI M LLGA ++RE   FP
Sbjct: 1126 FGMPPTGGLGLGIDRIAMFLLGA-SIRETLAFP 1157



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 15/230 (6%)

Query: 33  HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITG 92
           HGG++F D+R+     QV+   D     +A      W   +D   + R A T      +G
Sbjct: 740 HGGVLFADLREGGVELQVMFTADRPEAGLAL-----WRETVDPGDLVRVAGTA-CRSRSG 793

Query: 93  QIELSAQKIEILSVAEELPLPVFGEREYPES-IRFKYRFLDLR-RDTLHKNIVKRTRIIN 150
           ++ + A+   +   A+ L  P    R   ++ +R + R +DL       + ++ R+  + 
Sbjct: 794 ELSVHAESWSM--AAKCLTPPPDKHRGLRDAEVRVRQRHMDLALGGEARRRLLARSAAVR 851

Query: 151 SMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMAS 208
           ++R R+    F+E  TP+L        AR F   + +N       L  AP+ Y + L   
Sbjct: 852 AIRGRLAEHGFVEVETPMLNRIHGGANARPF--STHINAYDLDLTLRIAPELYLKQLCVG 909

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           GF++ F+I   FR+E   S   P EF  L+   +  +   +    E+++R
Sbjct: 910 GFEKIFEIGKNFRNEGADSTHNP-EFTALEAYEAHGDYTTMRRLAEDLIR 958


>gi|109946976|ref|YP_664204.1| lysyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123066312|sp|Q17YS1|SYK_HELAH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|109714197|emb|CAJ99205.1| lysyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
          Length = 501

 Score = 50.4 bits (119), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSIHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFEMEGFLEVETPMMHPI-PGGANARPFITYHNALEIERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|154336461|ref|XP_001564466.1| asparaginyl-trna synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134061501|emb|CAM38530.1| putative asparaginyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 895

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 103/253 (40%), Gaps = 23/253 (9%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G+L      + V + GW HRVR    + F+ +RD  G  Q V +  +  F     +    
Sbjct: 456 GELPSQKESACVYVVGWAHRVRHQSRMSFVVLRDGSGFIQCVFDGSTEPFHRESCIAIRG 515

Query: 70  VLCIDGLVMSRSAETINANI----ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            L  +    S     +  ++    I G    S   IE +  AE     ++ +R       
Sbjct: 516 TLRYEPKAKSELQPPMELHVHEYAIVGN---SDGTIETIITAESSVDKLYDQRHI----- 567

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                  + R T+  +++K R  ++ + R    +  + E + P L  +  EG        
Sbjct: 568 -------VARGTVASSVLKVRHELLRAFREYFWSRRYYEVTPPTLVQTQVEGGSTLFDVL 620

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              + ++  L Q+ Q Y + + AS  + Y  + P +R E  ++ R   EF  L++E    
Sbjct: 621 YYGENAY--LTQSSQLYLETVTASLGNVYCCL-PSYRAEKSKTKRHLSEFTHLEIEYDVC 677

Query: 245 EQDDILNTMENVL 257
             +D+LN +E+++
Sbjct: 678 SFEDLLNHLEDMI 690



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 33/218 (15%)

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           ++ +GN+  M      LN   T+ I    D++D  +  F    P +   +A DA      
Sbjct: 698 IERAGNMVAM------LN--PTQLINPNGDVRDSTNYKFTPKRPFRRLRYA-DA-IQFCN 747

Query: 423 ELGIINCNC---FEFCW-IMDFPFYEWNEEEKKIDF-AHNPFTMPQGGMESLKGNDLLSI 477
           E GI+N      FEF   I D P      +  +  F  H P  M    M+    +  L+ 
Sbjct: 748 ENGILNTETGKPFEFGDDITDQPERAMVAQMGEFVFMTHFPAQMKSFYMQRDPADTTLTE 807

Query: 478 KAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVV-----ENRFGGLYRAFQC 531
                D++  G  E+  G +R +  + +L A+   G+          + R+GG       
Sbjct: 808 SV---DVLVPGIGEVVGGSMRMYKYDELLDAYKREGLDASTYYWYTDQRRYGGA------ 858

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
              PHGG   G++R+++ +L   NV++  ++P     C
Sbjct: 859 ---PHGGFGLGVERLLVWMLNLDNVKDACMYPRYMGRC 893


>gi|13508016|ref|NP_109965.1| lysyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501019|sp|P75500|SYK_MYCPN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1674257|gb|AAB96206.1| lysyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 489

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 86/172 (50%), Gaps = 5/172 (2%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRII 149
           TG + L+ ++++I++   + P   +     PE+ R + R+LDL  +     + +KRT+II
Sbjct: 118 TGVLTLNVERLQIVAKCLQTPPEKWHGLTDPEA-RARKRYLDLTYNRAQVEVFLKRTQII 176

Query: 150 NSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            ++R  +    F+E  TPIL A      A+ F       +G FY L  A +   + L+  
Sbjct: 177 TAIRTFLNEAGFLEVETPILQAVLGGANAKPFKTHYNALKGDFY-LRIANEIALKKLIVG 235

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           G  + +++   FR+E   +   P EF  ++M  +  +   +++  EN+++ V
Sbjct: 236 GLPKVYEMGRMFRNEGVDTTHNP-EFTSIEMYQANADYAVMMDLTENLIKFV 286



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   G+PP GG+  G+DR+VMLL    ++R+V  FP
Sbjct: 448 ALSFGLPPTGGLGIGVDRLVMLLCECSSIRDVVFFP 483


>gi|302415325|ref|XP_003005494.1| asparaginyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261354910|gb|EEY17338.1| asparaginyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 506

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 45/262 (17%)

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G V  RSA T+ A++     + S +K       + L  P+  + + PE +R     
Sbjct: 62  VVVNGYV--RSARTMKADVFVHIGDGSTRK-----PLQALTYPIQKKYQTPEYLRT---I 111

Query: 131 LDLR-RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL------- 181
             LR R  L+  I++ R+  +N++     + +F +   PI+T+S  EG  +         
Sbjct: 112 PHLRSRIPLNAAILRLRSDAVNALTRFFSSRDFTQTHPPIVTSSDCEGGGEVFNVSVQTR 171

Query: 182 ------VP-----SRVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRS 227
                  P     ++    +F+  P+      QL    +A      + ++P FR E   +
Sbjct: 172 ESMADDTPEKKRGTKNTTDTFFRGPRYLTVSTQLHLEALAQSVGNVWTLSPTFRAERSDT 231

Query: 228 DRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNT--------VSNNFLRIC 278
            R   EFY L+ EM FV E DD+L  +E++LR V  +              VS+N  R  
Sbjct: 232 SRHMSEFYMLEAEMPFVDEMDDVLELVEDMLREVTTDMYRDRAATELRERRVSSNASRTA 291

Query: 279 YDDAIRRYGTDKPDLRNPIIMH 300
            DD +     D+ + R   +MH
Sbjct: 292 EDDLV---SADEVERRWAGMMH 310



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 3/90 (3%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF---QCGMPPHGGIA 540
           LV +  EIA G +R H    + +A    G+        F GL       + G  PHGG  
Sbjct: 416 LVPDLCEIAGGSMREHRLADLQEAMQARGMVSSSGTPGFNGLDWYLDLRRWGSCPHGGFG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G DR++  L G  N+R+V  FP     CD
Sbjct: 476 LGFDRLLSYLAGVPNIRDVVAFPRWHGRCD 505


>gi|317176998|dbj|BAJ54787.1| lysyl-tRNA synthetase [Helicobacter pylori F16]
 gi|317179421|dbj|BAJ57209.1| lysyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 501

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFETEGFLEVETPMMHPI-PGGANARPFITYHNALEIERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|208434136|ref|YP_002265802.1| lysyl-tRNA synthetase [Helicobacter pylori G27]
 gi|226710889|sp|B5Z9V6|SYK_HELPG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|208432065|gb|ACI26936.1| lysyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 501

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFEMEGFLEVETPMMHPI-PGGANARPFITYHNALEVERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|301321281|gb|ADK69924.1| asparagine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC
           str. Gladysdale]
          Length = 454

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 105/251 (41%), Gaps = 22/251 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + G V   R    + F+ + D    T  QVV    +  +E A   R   ++ + G V+
Sbjct: 18  VEILGRVRSNRQGKFVSFMILNDGTTFTDLQVVYKTKTKGYEQALQARVSSIVKVVGRVV 77

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               +     +   +IEL  Q IE          P+  +    E +R       LR  T 
Sbjct: 78  LTPEKQQKFEVQADEIELIDQAIE--------DYPLQKKEHTTEYLR---EIAHLRAKTK 126

Query: 139 HKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGARD-FLVPSRVN---QGSFY 192
             N + + R   +         +NF+   +PI+T++  EGA + FLV +R +   +  F+
Sbjct: 127 TFNAIFKIRSAAAYAIHRFFNEKNFVYIHSPIITSNDAEGAGEAFLVTTREDADYEKDFF 186

Query: 193 ALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               +     QL     A  F + +   P FR E+  + +   EF+ ++ E++F +  D 
Sbjct: 187 GKKASLTVSGQLHAEAFAQAFKKVYTFGPTFRAENSNTAKHAAEFWMIEPEVAFADLKDN 246

Query: 250 LNTMENVLRGV 260
           +  ++++++ +
Sbjct: 247 IQLIQDMVKYI 257


>gi|167629422|ref|YP_001679921.1| lysyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592162|gb|ABZ83910.1| lysyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 230

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 31/44 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP  ++  DL
Sbjct: 187 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVILFPTMRHRDDL 230


>gi|302185553|ref|ZP_07262226.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 416

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 118/260 (45%), Gaps = 20/260 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E    V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLPEETLAEVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTSVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA-LPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L  + P GA      +  N       L  AP+ Y + L+  GF++ F+
Sbjct: 194 MKRDFLEVETPMLQ-TIPGGAAAKPFETHHNALDLEMFLRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRY 286
           V      F+R+   D+I +Y
Sbjct: 312 VFHFGEPFVRLSVFDSILKY 331


>gi|68071695|ref|XP_677761.1| lysine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56498000|emb|CAH95108.1| lysine--tRNA ligase, putative [Plasmodium berghei]
          Length = 598

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 92/181 (50%), Gaps = 10/181 (5%)

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR--FLDLRRDTLHK-NIVKRT 146
           + G++ L  + I IL+ A  LPLP   + +  + I +KYR  +LD   ++  K  I+ R 
Sbjct: 188 LRGELTLHTKNIYILTKAL-LPLP--DKHKGMKDIEYKYRKRYLDFLTNSEQKEKIITRF 244

Query: 147 RIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
            II  +R  ++ + ++E  TP+L   +    A+ F    +      Y L  AP+ + + L
Sbjct: 245 NIIQEIRRFLLKKKYLEVDTPMLQLVAGGASAKPFETHLKSLDLVLY-LRIAPELFLKKL 303

Query: 206 MASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           + SG  ++ F+++ CFR+E   +   P EF  L++  S+     ++   + +++ V ++ 
Sbjct: 304 IISGISEKIFELSKCFRNEGLSTIHNP-EFTMLEIYKSYANYKYMMKFTKKLIKNVAKKI 362

Query: 265 S 265
           S
Sbjct: 363 S 363



 Score = 40.8 bits (94), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 24/37 (64%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A   G+PP GG+  GIDR+ MLL  + +++ +  FP+
Sbjct: 558 ALAHGLPPTGGLGIGIDRLCMLLTNSSSIKNILPFPI 594


>gi|315586182|gb|ADU40563.1| lysine--tRNA ligase [Helicobacter pylori 35A]
          Length = 501

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFETEGFLEVETPMMHPI-PGGANARPFITYHNALEIERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|294155984|ref|YP_003560368.1| lysine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291599887|gb|ADE19383.1| lysine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 491

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 112/258 (43%), Gaps = 24/258 (9%)

Query: 38  FLDIRDHYGITQVVANP--DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           F+ I+D++G  QV  N   D    ++  S     ++ + G+VM            T +I 
Sbjct: 75  FILIKDYHGKIQVYFNKKEDEKLAKLVDSFDLGDIISVSGIVMKTH---------TNEIA 125

Query: 96  LSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRC 154
           + +QKIE+L+ + + LP    G  +  E  R +Y  L +  D+  K    RT++++ +R 
Sbjct: 126 IRSQKIELLTKSLKPLPDKYHGLTDIEEKYRRRYVDLIVNEDS-KKVFWTRTKVVSEIRK 184

Query: 155 RMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
                 ++E  TP L    S   AR F          F  L  A +   + L+  G DR 
Sbjct: 185 YFDELEYMEVETPFLHDYISGAAARPFKTHHNALDQEF-VLRIATEIPLKKLLVGGVDRV 243

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR------GVFEEFSNG 267
           +++   FR+E   +   P EF  ++   ++   + ++   E V +      G ++  +NG
Sbjct: 244 YEMGRIFRNEGIDTTHNP-EFTTIEFYEAYSNLEGMMKRTEEVFKRIAKRLGKYKYINNG 302

Query: 268 NTV--SNNFLRICYDDAI 283
             +  S  F R+   DA+
Sbjct: 303 VEIDLSKPFKRLDMVDAV 320



 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG   GIDR+VML    +++R+V LFP
Sbjct: 448 ALEYGMPPAGGCGIGIDRLVMLFSEKESIRDVLLFP 483


>gi|255319145|ref|ZP_05360363.1| lysyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262379277|ref|ZP_06072433.1| lysyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255303791|gb|EET82990.1| lysyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262298734|gb|EEY86647.1| lysyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 509

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 6/138 (4%)

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RD 179
            ++++ R+LDL   +   K    R +++  +R  + +E F+E  TP++    P GA  R 
Sbjct: 166 EVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRSYLNSERFMEVETPMMHVI-PGGASARP 224

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++ 
Sbjct: 225 FETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEF 282

Query: 240 EMSFVEQDDILNTMENVL 257
             ++ +  D++   EN+L
Sbjct: 283 YQAYADYKDLMQLTENML 300



 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VM+   A ++R+V LFP
Sbjct: 467 ALEYGLPPTAGEGIGIDRLVMIFADAPSIRDVILFP 502


>gi|291286674|ref|YP_003503490.1| asparaginyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290883834|gb|ADD67534.1| asparaginyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 453

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 113/301 (37%), Gaps = 46/301 (15%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGL 76
           S + + GWV   R      FL++ D   +   Q +A+ D   +++ K + +   + I G 
Sbjct: 16  SDITVHGWVRSKRDSKNFTFLELNDGSCLKNLQAIADEDIGTYDVLKDINTGASVEIKGD 75

Query: 77  VMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           ++    +        GQ  EL A+ + ++  A++   P+  +R   E +R   +   LR 
Sbjct: 76  LIESPGK--------GQKWELKAKAVALVGGADQETYPLQKKRHSDEFLR---QIAHLRP 124

Query: 136 DTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGA---------RDFLVPS 184
            T     + R R   S           F    TPI+T S  EGA          D   P 
Sbjct: 125 RTNKYGAIFRIRSEASFAVHQFFRERGFHYVHTPIITGSDCEGAGQMFRVTTLEDTKKPV 184

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             +     A      Q      A      +   P FR E+  + R   EF+ ++ EM+F 
Sbjct: 185 AEDFFGKAAYLTVSGQLDAESYACALGSVYTFGPTFRAENSNTPRHAAEFWMIEPEMAFA 244

Query: 245 EQDDILNTMENVLRGV-----------FEEFSN----------GNTVSNNFLRICYDDAI 283
           +  D +   E  ++ +            E F N           N ++N+F R+ Y +A+
Sbjct: 245 DIHDNMTLAEEFVKYLIWFLMENCKEDLELFFNFVDKELEAKLTNMLTNDFERVEYREAV 304

Query: 284 R 284
           +
Sbjct: 305 K 305



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 4/79 (5%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV +  E+  G  R    +V+  A   +G+S E     +G      + G  PH G   G 
Sbjct: 370 LVPSVGELIGGSQREERLDVLDSAIEKMGLSME----EYGWYAELRKYGTVPHAGFGLGF 425

Query: 544 DRIVMLLLGAKNVREVSLF 562
           +R++M + G  N+R+V  F
Sbjct: 426 ERLLMFVTGVTNIRDVIPF 444


>gi|291326404|ref|ZP_06124357.2| asparagine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291314408|gb|EFE54861.1| asparagine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 472

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 123/327 (37%), Gaps = 57/327 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VG+ V + GWV   R  + G  FL + D         NP  A         ++ VL +  
Sbjct: 22  VGTEVTVQGWVRTRRDSNAGFSFLAVYDGSCF-----NPLQAIINNNLPNYNDEVLHLTT 76

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL 133
                   T+  +   GQ  EL A  ++++   E+    P+  +R    S+ F      L
Sbjct: 77  GCSVEVTGTVKESPGQGQSFELEATAVKVVGWVEDPDTYPMAAKRH---SVEFLREAAHL 133

Query: 134 RRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T     V R R  +  ++      + +   STP++TAS  EGA +     RV+   +
Sbjct: 134 RPRTNLIGAVARVRHTLAQAIHRFFDEQGYFWVSTPVITASDTEGAGEMF---RVSTLDY 190

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             LP+  +                    Q      A+   + +   P FR E+  + R  
Sbjct: 191 NNLPRDDKGEVDFSEDFFGREAFLTVSGQLNGEAYATAISKVYTFGPTFRAENSNTSRHL 250

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT-----------V 270
            EF+ ++ E++F   DD+    E +L+  F+          EF                V
Sbjct: 251 AEFWMVEPEVAFASLDDVAGLAEKMLKFAFKAALEERRDDLEFFAQRVDKDVINRLESFV 310

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +++F ++ Y DAI+   T      NP+
Sbjct: 311 NSDFAQVDYTDAIKILETCGQKFENPV 337


>gi|167855563|ref|ZP_02478324.1| asparaginyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853309|gb|EDS24562.1| asparaginyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 467

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 137/347 (39%), Gaps = 65/347 (18%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D   +   Q + N D +
Sbjct: 1   MSKFPTISEILSGKVAVGEEVAVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDLS 60

Query: 58  CF--EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLP 113
            +  E+ + + +   + + G+++   AE        GQ +EL A+ +E++   E+    P
Sbjct: 61  NYQDEVLR-LTAGCSVIVTGVIVESPAE--------GQAVELQAKSVEVVGWVEDPDTYP 111

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTA 171
           +  +R    SI +      LR  T     V R R  +  ++      + F   +TP++TA
Sbjct: 112 MAAKRH---SIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITA 168

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQA-------PQQY---KQLLMASG----------FD 211
           S  EGA +     RV+      LP+         Q +   +  L  SG            
Sbjct: 169 SDTEGAGEMF---RVSTLDLENLPRGEDGKVDFSQDFFGRESFLTVSGQLNGETYACALS 225

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL----RGVFEEFSNG 267
           + +   P FR E+  + R   EF+ ++ E +F    D     E++L    R V EE  + 
Sbjct: 226 KVYTFGPTFRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFRAVLEERKDD 285

Query: 268 -----------------NTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
                            N ++++F +I Y DAI        D   P+
Sbjct: 286 LKFFEKHVDNTVISRLENFINSDFAQIDYTDAIEVLLKSGKDFEFPV 332


>gi|255087702|ref|XP_002505774.1| predicted protein [Micromonas sp. RCC299]
 gi|226521044|gb|ACO67032.1| predicted protein [Micromonas sp. RCC299]
          Length = 667

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 74/142 (52%), Gaps = 6/142 (4%)

Query: 122 ESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--R 178
           +  R++ R+LDL  +   ++I + R+ +I S+R  +  ++F+E  TP++    P GA  +
Sbjct: 218 QETRYRKRYLDLIMNPEVRDIFITRSNVIRSIRKYLDDKDFVEVETPMMNMI-PGGATAK 276

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+        + Y +  AP+ Y + L+  G DR ++I   FR+E       P EF   +
Sbjct: 277 PFITHHNDLDMTLY-MRIAPELYLKELVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTCE 334

Query: 239 MEMSFVEQDDILNTMENVLRGV 260
             M++ + +D++   E ++ G+
Sbjct: 335 FYMAYADYEDLMKMTEELISGM 356



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   G+DR+ M+L    N++EV LFP
Sbjct: 529 SLEYGLPPTGGWGIGVDRLTMMLTDTANIKEVLLFP 564


>gi|212540142|ref|XP_002150226.1| lysyl-tRNA synthetase, putative [Penicillium marneffei ATCC 18224]
 gi|210067525|gb|EEA21617.1| lysyl-tRNA synthetase, putative [Penicillium marneffei ATCC 18224]
          Length = 521

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 21/180 (11%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQ 203
           R+ II  +R   +   F+E +TPI+ + +    AR F+  +         L  AP+ + +
Sbjct: 198 RSAIIQYIRQFFVERAFMEVNTPIMASEAGGATARPFVTTANEFPDKSLYLRIAPELWLK 257

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE- 262
            L+  GFD+ F+I   FR+E       P EF   +  M++   +D+++  E++  G+ E 
Sbjct: 258 RLVIGGFDKVFEIGASFRNEGIDKSHNP-EFTTCEFYMAYANLEDVMSMTESLFSGLAEH 316

Query: 263 ----------EFSNGNT-VSNNFLRICY----DDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
                     E    NT  S  F RI +    + AI R     PDL +P    +V + F 
Sbjct: 317 VTQHKERMNSEIPTPNTNFSAPFRRIDFIPGIEQAINR---PLPDLSSPTAEEDVKQLFA 373


>gi|288803723|ref|ZP_06409152.1| lysine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288333812|gb|EFC72258.1| lysine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 578

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           R+ Q GMPP  GI  GIDR+VML+ G + ++EV LFP
Sbjct: 461 RSLQYGMPPTSGIGIGIDRLVMLMTGKEYIQEVLLFP 497



 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 133/303 (43%), Gaps = 35/303 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-GLVM 78
           V ++G +   R  G   F +++D  G  QV    D  C    K   ++ +   +D G  +
Sbjct: 54  VVIAGRMMGRRVMGKASFAELQDSKGRIQVYITRDDICPGEDKEFYNKVFKKLLDIGDFI 113

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRF 130
               E     +  G+I + A++I +LS + + PLPV        + + E PE  R++ R+
Sbjct: 114 GVKGEVFKTQM--GEISVHAKEITVLSKSLK-PLPVVKYKDGEAYDKFEDPEQ-RYRQRY 169

Query: 131 LDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           +DL   + +    +KR  ++ +MR       + E  TP L + +    AR F+       
Sbjct: 170 VDLVVNEGVKDTFLKRAIVLRTMRKFFDEAGYTEVETPTLQSIAGGASARPFITHFNALN 229

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDMEMSFVEQD 247
              Y +  A + Y + L+  GF+  ++I   FR+E    DR    EF  +++ + + + +
Sbjct: 230 VDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEG--MDRFHNPEFTCMELYVQYKDYN 286

Query: 248 DILNTMENVLRGVFEEFSN------GNTV---SNNFLRICYDDAIRR------YGTDKPD 292
            +++  E +L  +  E +       G+ V      F R+   DAI+       YG  + +
Sbjct: 287 WMMSFTEKLLEKICIEVNGKPEVQVGDKVISFKAPFRRLPILDAIKEKTGFDLYGKTEEE 346

Query: 293 LRN 295
           +RN
Sbjct: 347 IRN 349


>gi|257068467|ref|YP_003154722.1| lysyl-tRNA synthetase (class II) [Brachybacterium faecium DSM 4810]
 gi|256559285|gb|ACU85132.1| lysyl-tRNA synthetase (class II) [Brachybacterium faecium DSM 4810]
          Length = 502

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 9/164 (5%)

Query: 111 PLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLPV    +  E  R ++R++DL  R      + +R  +++S+R       ++E  TP+L
Sbjct: 150 PLPVL-HADLSEESRVRHRYVDLIVRQEARDTVRQRAEVMHSLRTSFHDREYVEIETPML 208

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
               S   AR F+          Y L  AP+ Y +     G ++ F+I   FR+E   S 
Sbjct: 209 QVIPSGAAARPFVTHMHAFDLDLY-LRIAPELYLKRAAVGGLEKVFEINRNFRNEGADST 267

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN 272
             P EF  L+   ++ +     NT+ ++ R + +E +   T S 
Sbjct: 268 HSP-EFAMLEAYQAYGD----YNTIGDLTRTLVQEAAERATGSQ 306


>gi|225011199|ref|ZP_03701659.1| asparaginyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225004660|gb|EEG42622.1| asparaginyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 477

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 111/269 (41%), Gaps = 30/269 (11%)

Query: 14  VSDVGSFVRLS--GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           + DV     L+  GWV   R +  I   D      + Q V + DS   EI K +     L
Sbjct: 10  LQDVAPLTTLTVQGWVRSFRSNRFIALNDGSCMENL-QCVIDFDSLPEEILKKITVGAAL 68

Query: 72  CIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            I G +     +        GQ +E+ A ++EIL V++    P+  ++   E +R +   
Sbjct: 69  KITGTLQESEGK--------GQRVEIQATEVEILGVSDPETYPIQPKKHSLEFLR-QNAH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--- 187
           L +R +T    +  R+ +  ++     +++F    TPI+T S  EGA +    S ++   
Sbjct: 120 LRVRTNTFSAIMRVRSTLSFAVHQYFRSQDFNYVHTPIVTGSDAEGAGEMFRVSTLDPKN 179

Query: 188 -----------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                      +  F+          QL     A    + +   P FR E+  + R   E
Sbjct: 180 PPLDSNGAIDYREDFFGKETNLTVSGQLEAETYAMALGKVYTFGPTFRAENSNTSRHLAE 239

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           F+ ++ EM+F + D  ++  E+ ++ V +
Sbjct: 240 FWMIEPEMAFYDLDANMDLAEDFIQNVIK 268


>gi|330975435|gb|EGH75501.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 500

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 20/260 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E    V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGPIQVYVNRKTLPEETLAEVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTSVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L T      A+ F           + L  AP+ Y + L+  GF++ F+
Sbjct: 194 MKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRY 286
           V      F+R+   D+I +Y
Sbjct: 312 VFHFGEPFVRLSVFDSILKY 331



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 408 RFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTASPSIRDVILFP 494


>gi|329896806|ref|ZP_08271722.1| Lysyl-tRNA synthetase (class II) [gamma proteobacterium IMCC3088]
 gi|328921561|gb|EGG28941.1| Lysyl-tRNA synthetase (class II) [gamma proteobacterium IMCC3088]
          Length = 494

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 6/163 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP        + +R++ R++DL   D +      R++I+  +R  M A  F+E  TP++
Sbjct: 142 PLPDKYHGLADQELRYRQRYVDLIVNDDVRARFKLRSKIVAYIRDFMEARGFMEVETPMM 201

Query: 170 TASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
               P GA  + F+          Y L  AP+ Y + L   GF+R F+I   FR+E   +
Sbjct: 202 QVI-PGGATAKPFVTHHNALDLDMY-LRIAPELYLKRLTVGGFERVFEINRNFRNEGLST 259

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
              P EF  L+   ++ +  D +   E +L+G+  +     T+
Sbjct: 260 RHNP-EFTMLEYYWAYADYRDAMLLTEQMLQGLVGDVLGATTI 301



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G E+A+G    + +E   + F      K+  +     F   Y RA + GMPP 
Sbjct: 403 RFEFFVAGRELANGFSELNDAEDQAERFKAQVAEKDAGDEEAMHFDADYIRALEYGMPPT 462

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 463 AGEGIGIDRLVMLLTDSPSIRDVLLFP 489


>gi|254468124|ref|ZP_05081530.1| lysyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207086934|gb|EDZ64217.1| lysyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 503

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+G    +  E   + F      KE  ++          RA + GMPP 
Sbjct: 412 RFELFIAGREIANGFSELNDPEEQSERFKKQVEQKEAGDDEAMYYDADFIRALEYGMPPT 471

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR++ML+    ++R+V LFP
Sbjct: 472 GGCGIGIDRLIMLITNKPSIRDVILFP 498



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 11/243 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  I+D  G  Q+    D    E    + S +     G ++  
Sbjct: 64  VVVAGRMMLKRVMGKASFATIQDRTGRIQLYVARDLINNEDNPELYSSFKKWDMGDIIGA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRDTLH 139
             +    N      EL+ +  EI  + + L P+P        + ++++ R++DL  +   
Sbjct: 124 KGKLFKTNTD----ELTIEVTEICLLTKSLRPMPEKFHGLQDQEMKYRQRYVDLMVNQET 179

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQ 196
           K+  + R++ I S+R  M++  F+E  TP+L    P GA  + F+          + +  
Sbjct: 180 KDTFLTRSKAIQSIREFMVSNKFLEVETPML-HPIPGGASAKPFVTHHNALDMEMF-MRI 237

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++   ++ +   ++   E+ 
Sbjct: 238 APELYLKRLVVGGFDRVFEINRNFRNEG-LSVRHNPEFTMMEFYAAYADYQWLMTFTEDC 296

Query: 257 LRG 259
           +R 
Sbjct: 297 IRS 299


>gi|56961899|ref|YP_173621.1| lysyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81367474|sp|Q5WLU5|SYK_BACSK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|56908133|dbj|BAD62660.1| lysyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 502

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP  +N
Sbjct: 458 ALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVILFPQMRN 497



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 11/183 (6%)

Query: 95  ELSAQKIEILSVAEEL-PLP--VFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150
           E+S +  E++ + + L PLP    G ++  +  R++ R+LDL      +   + R++II 
Sbjct: 130 EMSVKVTELVILGKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITSPESRTAFITRSKIIQ 187

Query: 151 SMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            MR  +  + F+E  TP++  S P G  AR F+          Y +  A + + + L+  
Sbjct: 188 VMRRYLDEKGFLEVETPMM-HSIPGGASARPFVTHHNTLDMELY-MRIAIELHLKRLIVG 245

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           G ++ ++I   FR+E   +   P EF  +++  ++ +  DI+   E V+  + +E     
Sbjct: 246 GLEKVYEIGRVFRNEGISTRHNP-EFTMIELYEAYADYHDIMELTEGVIAHIAKEVLGTT 304

Query: 269 TVS 271
           TV 
Sbjct: 305 TVQ 307


>gi|54295128|ref|YP_127543.1| asparaginyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|81368151|sp|Q5WUG0|SYN_LEGPL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|53754960|emb|CAH16448.1| asparagine tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 467

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 120/303 (39%), Gaps = 45/303 (14%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACF- 59
           +    C D  +S +   V + GWV   R    G+ F+ + D   +   Q+VA    + + 
Sbjct: 5   FTIKQCLDGEIS-IDETVTVRGWVKTRRDSKAGLSFISLHDGSCFSPIQIVATDQLSNYQ 63

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEEL-PLPVFG 116
            E+ K      ++    LV S+           GQ  E+ A+ IE++   E     P+  
Sbjct: 64  KEVTKLTAGCSMIATGKLVASQGK---------GQFFEIQAESIEVVGWVENPDTYPIQA 114

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           +R   E +R +   L  R +T+      R  +  ++      + F    TPI+TAS  EG
Sbjct: 115 KRHTLEFLR-EVAHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEG 173

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQY----------KQLLMASG----------FDRYFQI 216
           A +     RV+      +P+  +            +  L  SG            + +  
Sbjct: 174 AGEMF---RVSTLDLLNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMSKVYTF 230

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR----GVFEEFSNGNTVSN 272
            P FR E+  + R   EF+ ++ E++F   +DI    +N+LR     V EE S+     N
Sbjct: 231 GPTFRAENSNTSRHLAEFWMIEPEIAFANLEDICKLSQNMLRYLCKTVLEERSDDMDFFN 290

Query: 273 NFL 275
            F+
Sbjct: 291 QFV 293


>gi|33519727|ref|NP_878559.1| lysyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|39932112|sp|Q7VRF5|SYK_BLOFL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33504072|emb|CAD83333.1| lysyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 485

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/294 (22%), Positives = 132/294 (44%), Gaps = 39/294 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-----ANPDSACFEIAKSVRSEWVLCIDG 75
           V ++G +   R  G   F+ +RD  G  Q+          +  F++ K+     ++ + G
Sbjct: 43  VSVAGRIMTRRIMGKSSFMTLRDGGGCIQLYFTIHDMKSQTMYFKVIKTWDIGDLIGVKG 102

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL- 133
           ++             TG++ +  +++ +L+ +   LP    G R      +++ R+LDL 
Sbjct: 103 VLFKTR---------TGELSIHCKEMVLLTKSLRSLPDKFHGLRNI--ETKYRQRYLDLI 151

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLV-PSRVNQGS 190
             +   K    R+ II+ +R  M   +FIE  TP++    P GA  R F+   +++N   
Sbjct: 152 VNEESMKTFKIRSLIISEIRRFMHQHHFIEVETPMM-HHIPGGALARPFVTYHNKLNMNM 210

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  +  AP+ Y + L+  GF++ F+I   FR+E       P EF  +++  ++V+ ++++
Sbjct: 211 YLRI--APELYLKKLIIGGFEKIFEINRNFRNESISPYHNP-EFTMMEIYEAYVDYNNMI 267

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             ++ + R          T++   LR     ++  YG    D   P I  ++ E
Sbjct: 268 IFVQELFR----------TLTERILR----KSVIEYGDYSLDFEKPFIKMSIKE 307



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VMLL    N+R+V LFP
Sbjct: 445 ALEYGLPPTAGVGIGIDRLVMLLTNKHNIRDVILFP 480


>gi|153000465|ref|YP_001366146.1| asparaginyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217973546|ref|YP_002358297.1| asparaginyl-tRNA synthetase [Shewanella baltica OS223]
 gi|166231674|sp|A6WMP4|SYN_SHEB8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|151365083|gb|ABS08083.1| asparaginyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217498681|gb|ACK46874.1| asparaginyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 466

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 106/280 (37%), Gaps = 48/280 (17%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    GI FL + D             +CF   + V    + 
Sbjct: 12  GEHAVGSKVTVRGWVRTRRDSKAGISFLAVYD------------GSCFNPIQGVVPNSLD 59

Query: 72  CIDGLVMSRSAETINANIITGQI----------ELSAQKIEILS-VAEELPLPVFGEREY 120
             D  V+  +A    + ++TG +          EL    IE+   V +    P+  +R  
Sbjct: 60  NYDNEVLKLTAGC--SVVMTGDVVESPGAGQAFELQVTDIEVAGWVDDPDTYPMAAKRHS 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGAR 178
            E +R       LR  T     V R R  +  ++      E FI  STP++TAS  EGA 
Sbjct: 118 IEHLR---ELAHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAG 174

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFR 221
           +    S ++  +          Y +        L  SG            + +   P FR
Sbjct: 175 EMFRVSTLDMENLPRTEAGKVDYDKDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFR 234

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            E+  + R   EF+ ++ E++F   +DI    E +L+  F
Sbjct: 235 AENSNTSRHLAEFWMVEPEVAFANLNDIAGLAEAMLKYAF 274


>gi|33596660|ref|NP_884303.1| lysyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|39932130|sp|Q7W8T6|SYK_BORPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33573361|emb|CAE37345.1| lysyl-tRNA synthetase [Bordetella parapertussis]
          Length = 506

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 108/245 (44%), Gaps = 21/245 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----VLCIDGL 76
           V+++G +   R  G   F  ++D  G  Q+         E A +   +W    ++ I+G 
Sbjct: 66  VKVAGRMMLKRVMGKASFATLQDGSGRIQIYLE-RGTLGEEAYAAFKQWDIGDIIAIEGP 124

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RR 135
           V   +          G++ + A    +LS +   PLP        + +R++ R++DL   
Sbjct: 125 VFKTN---------KGELSVHANSARLLSKSLR-PLPDKFHGVADQELRYRQRYVDLIMT 174

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA 193
           D   +    R++ +  +R  M+   F E  TP+L    P GA  + F+          + 
Sbjct: 175 DATRRTFEARSKAVGGIRQAMLNAGFFEVETPMLH-PIPGGAAAKPFVTHHNALDMQMF- 232

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  
Sbjct: 233 LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYADYRWLMDFT 291

Query: 254 ENVLR 258
           E+++R
Sbjct: 292 EDLIR 296



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E   + F     +K+  +     F   Y RA + GMPP 
Sbjct: 414 RFELFITGREIANGFSELNDPEDQAERFRAQVEAKDAGDEEAMYFDADYIRALEYGMPPT 473

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 474 GGCGIGIDRLVMLLTDSPSIRDVILFP 500


>gi|120599027|ref|YP_963601.1| asparaginyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|146292902|ref|YP_001183326.1| asparaginyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166231676|sp|A4Y6E4|SYN_SHEPC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166232737|sp|A1RK52|SYN_SHESW RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|120559120|gb|ABM25047.1| asparaginyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|145564592|gb|ABP75527.1| asparaginyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 466

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 107/280 (38%), Gaps = 48/280 (17%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    GI FL + D             +CF   + V    + 
Sbjct: 12  GEHAVGSKVTVRGWVRTRRDSKAGISFLAVYD------------GSCFNPIQGVVPNSLE 59

Query: 72  CIDGLVMSRSAETINANIITGQI----------ELSAQKIEILS-VAEELPLPVFGEREY 120
             D  V+  +A    + ++TG +          EL   ++E+   V +    P+  +R  
Sbjct: 60  NYDNEVLKLTAGC--SVVMTGDVVESPGAGQAFELQVTELEVTGWVDDPDTYPMAAKRHS 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGAR 178
            E +R       LR  T     V R R  +  ++      E FI  STP++TAS  EGA 
Sbjct: 118 IEHLR---ELAHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAG 174

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFR 221
           +    S ++  +     +    Y +        L  SG            + +   P FR
Sbjct: 175 EMFRVSTLDMENLPRTSEGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFR 234

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            E+  + R   EF+ ++ E++F    DI    E +L+  F
Sbjct: 235 AENSNTSRHLAEFWMVEPEVAFATLSDIAGLAEAMLKYAF 274


>gi|294877918|ref|XP_002768192.1| asparaginyl-tRNA synthetase, putative [Perkinsus marinus ATCC
           50983]
 gi|239870389|gb|EER00910.1| asparaginyl-tRNA synthetase, putative [Perkinsus marinus ATCC
           50983]
          Length = 745

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/329 (22%), Positives = 132/329 (40%), Gaps = 64/329 (19%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC--FE--IAKSV 65
           D G   +G  V + GWV   R  G G  F++I D   +  +    DS+C  FE  I +  
Sbjct: 271 DGGAGLIGKTVSVCGWVRTKRSQGSGFAFVEISDGSCLQGLQLVLDSSCPDFEGAIGQIA 330

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQ---KIEILSVAEELPLPVFGEREYP 121
               +  I  LV S +          GQ +ELS +   KI+++   +    P+  ++   
Sbjct: 331 TGASIQAIGSLVASPA---------KGQAVELSVRESGKIKVIGGVDSAAYPLAKKQHSR 381

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-F 180
           E +R +   L  R + +      R+ +  ++    ++ +F    TP++T++  EGA + F
Sbjct: 382 EFLR-EIAHLRPRTNLIGAVARVRSSLSGAVHAFFMSRDFKYVHTPLITSADCEGAGEMF 440

Query: 181 LVPSRVN--QGSFYALPQAPQ----QYKQ-------LLMASG----------FDRYFQIA 217
            V S +   +G+   +   P+     YKQ        L  SG              +   
Sbjct: 441 QVTSLLQKAEGAHQDVKVDPKTGRFDYKQDFFGRPTYLTVSGQLNVENYACALSDVYTFG 500

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR--------------GVFEE 263
           PCFR E+  + R   EF+ ++ E+ F +  D +   E  ++                F++
Sbjct: 501 PCFRAENSHTSRHLAEFWMIEPELCFADIHDNMKCAEEFIQHCARHVLAHCREDIAFFDK 560

Query: 264 FSNG-------NTVSNNFLRICYDDAIRR 285
           F          N ++  F R+ Y +AI +
Sbjct: 561 FIEKGLIKRLENLIAEPFARVSYTEAIEK 589



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIAAGIDRIVM 548
           E+  G +R    +V+ +  S++ +    +E+ +   YR  +  G  PH G   G +R++M
Sbjct: 668 EVCGGSVREERLDVLDKKLSDLNMD---IEDYW--WYRDLRRFGSVPHAGFGIGFERLIM 722

Query: 549 LLLGAKNVREVSLFPMSQNFCDL 571
           ++ G +N+R+V  +P     C+ 
Sbjct: 723 MMTGVENIRDVIPYPRYPGRCEF 745


>gi|167837159|ref|ZP_02464042.1| lysyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 508

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFITGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 121/286 (42%), Gaps = 26/286 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q    P     E   + + +W L   G +++ 
Sbjct: 68  VAIAGRMMLKRVMGKASFATVQDGSGQIQFFVTPADVGAETYDAFK-KWDL---GDIVAA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N   G++ +   ++ +L+ A   PLP        +  R++ R++DL      +
Sbjct: 124 RGVLFRTN--KGELSVKCTELRLLTKALR-PLPDKFHGLADQETRYRQRYVDLIVTPETR 180

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
              + RT+ I S+R  M    F+E  TP+L    P GA  + F+          + L  A
Sbjct: 181 ATFRARTKAIASIRKFMSDAEFMEVETPMLH-PIPGGAAAKPFVTHHNALDMQMF-LRIA 238

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           P+ Y + L+  GF+R F+I   FR+E   PR +    EF  ++   ++ +   +++  E 
Sbjct: 239 PELYLKRLIVGGFERVFEINRNFRNEGVSPRHN---PEFTMMEFYAAYTDYRWLMDFTER 295

Query: 256 VLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
           ++R    +     T+         +  F R+    AIR+Y  +  D
Sbjct: 296 LIRQAAVDALGTATIQYQGRELDLAKPFHRLTITQAIRKYAPNYTD 341


>gi|39939075|ref|NP_950841.1| lysyl-tRNA synthetase class II [Onion yellows phytoplasma OY-M]
 gi|81402297|sp|Q6YPY6|SYK_ONYPE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|39722184|dbj|BAD04674.1| lysyl-tRNA synthetase class II [Onion yellows phytoplasma OY-M]
          Length = 511

 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 27/40 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A   GMPP GG+  G+DR+VMLL    N+R+V LFP  +N
Sbjct: 452 ALNYGMPPTGGLGMGLDRLVMLLTDTANIRDVILFPHCKN 491


>gi|295104508|emb|CBL02052.1| asparaginyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 462

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/333 (21%), Positives = 126/333 (37%), Gaps = 73/333 (21%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC-IDGL 76
           G+ + + GW   +R    I F            +A  D  CF+  + V     L   D +
Sbjct: 17  GTEITVCGWAKNIRDSKNIGF------------IALSDGGCFKTLQIVLEAGKLANYDEV 64

Query: 77  VMSRSAETINAN---IITGQ----IELSAQKIEILS--VAEELPLPVFGEREYPESIRFK 127
           + +    ++      ++T Q     EL+A+ +EIL    A+E PL     ++   S+ + 
Sbjct: 65  IHTGLYSSLRIKGKLVLTPQAKQPFELNAESVEILGDCPADEYPL-----QKKKMSMEYL 119

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRC-RMIAEN-FIECSTPILTASSPEGARDFLVPSR 185
                LR  T   N   R R + +    +   EN F+   +P++TAS  EGA +     R
Sbjct: 120 RTMPTLRPRTNTFNAAFRVRSVAAYAIHKFFQENGFVYAHSPLITASDCEGAGEMF---R 176

Query: 186 VNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDP 225
           V       LP+                       Q +   MA  F + +   P FR E  
Sbjct: 177 VTTLDLDNLPKTEDGAVDYSKDFFEKPVNLTVSGQLEAEAMAMAFGKVYTFGPTFRAEKS 236

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSNGNTV- 270
            + R   EF+ ++ EM+F + +  ++  E +++ V              F +F +   V 
Sbjct: 237 FTTRHAAEFWMIEPEMAFCDLNGYMDNAEAMIKYVIRYVLDNCPDEMAFFNQFIDKGLVE 296

Query: 271 ------SNNFLRICYDDAIRRYGTDKPDLRNPI 297
                 ++ F RI Y +AI     +    + P+
Sbjct: 297 RLELVANSEFARISYTEAIEILKKNNKKFQYPV 329


>gi|258614516|ref|ZP_05712286.1| lysyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 56

 Score = 50.1 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP
Sbjct: 18  ALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 53


>gi|302345761|ref|YP_003814114.1| lysine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302149924|gb|ADK96186.1| lysine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 578

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           R+ Q GMPP  GI  GIDR+VML+ G + ++EV LFP
Sbjct: 461 RSLQYGMPPTSGIGIGIDRLVMLMTGKEYIQEVLLFP 497



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 133/303 (43%), Gaps = 35/303 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCID-GLVM 78
           V ++G +   R  G   F +++D  G  QV    D  C    K   ++ +   +D G  +
Sbjct: 54  VVIAGRMMGRRVMGKASFAELQDSKGRIQVYITRDDICPGEDKEFYNKVFKKLLDIGDFI 113

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRF 130
               E     +  G+I + A++I +LS + + PLPV        + + E PE  R++ R+
Sbjct: 114 GVKGEVFKTQM--GEISVHAKEITVLSKSLK-PLPVVKYKDGEAYDKFEDPEQ-RYRQRY 169

Query: 131 LDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           +DL   + +    +KR  ++ +MR       + E  TP L + +    AR F+       
Sbjct: 170 VDLVVNEGVKDTFLKRAIVLRTMRKFFDEAGYTEVETPTLQSIAGGASARPFITHFNALN 229

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG-EFYQLDMEMSFVEQD 247
              Y +  A + Y + L+  GF+  ++I   FR+E    DR    EF  +++ + + + +
Sbjct: 230 VDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEG--MDRFHNPEFTCMELYVQYKDYN 286

Query: 248 DILNTMENVLRGVFEEFSN------GNTV---SNNFLRICYDDAIRR------YGTDKPD 292
            +++  E +L  +  E +       G+ V      F R+   DAI+       YG  + +
Sbjct: 287 WMMSFTEKLLEKICIEVNGKPEVQVGDKVISFKAPFRRLPILDAIKEKTGFDLYGKTEEE 346

Query: 293 LRN 295
           +RN
Sbjct: 347 IRN 349


>gi|328955952|ref|YP_004373285.1| asparaginyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456276|gb|AEB07470.1| asparaginyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 467

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 35/269 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSA--CFEIAKSVRSEWVLCI 73
           G  V ++GWV  +R      F+ I D   +   Q+V N D      EIA    S  ++  
Sbjct: 18  GELVTVAGWVRSIRDMKNFGFITINDGSSFRDLQIVMNRDQLDNYDEIAHQNVSAALVAT 77

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             + ++  A            EL+A+ I +   A     P+  +R   E +R +     L
Sbjct: 78  GVVKLTPDAPQ--------PFELTAETIRVEG-ASAPDYPLQKKRATVEYLRTQQH---L 125

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFLVPSRVN---- 187
           R R  L + + +   +  +   R   E  F+  +TPI+TA+  EGA +    + ++    
Sbjct: 126 RPRTNLFRAVFRIRSVTAAAIHRFFQERGFVYVNTPIITANDAEGAGEMFHVTTIDPMNP 185

Query: 188 ----------QGSFYALPQAPQQYKQLL---MASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+ +P +     QL     A  F   +   P FR E+  + R   EF
Sbjct: 186 PLSPNGEIDWSKDFFGVPASLTVSGQLNAENFAMAFGDVYTFGPTFRAENSNTARHAAEF 245

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           + ++ EM+F +  D ++  E +L+ +  E
Sbjct: 246 WMVEPEMAFADLADDMDLAEQMLKFLISE 274


>gi|15611240|ref|NP_222891.1| lysyl-tRNA synthetase [Helicobacter pylori J99]
 gi|11135067|sp|Q9ZMP8|SYK_HELPJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|4154685|gb|AAD05751.1| LYSYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 501

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSIHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFEMEGFLEVETPMMHPI-PGGANARPFITYHNALEIERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A    MP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHEMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|254778896|ref|YP_003057001.1| lysyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254000807|emb|CAX28731.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Helicobacter
           pylori B38]
          Length = 501

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESAILQAYVSQNELNNEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFEMEGFLEVETPMMHPI-PGGANARPFITYHNALEVERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|291295875|ref|YP_003507273.1| lysyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470834|gb|ADD28253.1| lysyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 502

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/280 (21%), Positives = 120/280 (42%), Gaps = 26/280 (9%)

Query: 5   RTHSCGDLGVSDVGSF---------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           +TH    +  +  G+          VR++G +   R  G   F  ++D  G  Q+    D
Sbjct: 32  KTHDAAQILAAHAGAAPQQEWPEEEVRVAGRLMTFRHMGKASFAHLQDQSGRIQLYLARD 91

Query: 56  -SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQK-IEILSVAEELPLP 113
            +  +++ K +    +L ++G V +           TG+I +  +K + ++     LP  
Sbjct: 92  ITEHYDLIKKLDIGDILGVEGTVFTTK---------TGEITIKVRKFVPLVKSLHPLPDK 142

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA- 171
             G R+     R++ R+LDL ++   + + + R+R++  +R       F+E   P L A 
Sbjct: 143 WHGIRDV--ETRYRQRYLDLIQNPEVREVFRIRSRMVRYIRDFFDQRGFLEVEGPTLQAI 200

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    A+ F          F  L  A + + + L+  GF++ F+I   +R+E       P
Sbjct: 201 AGGTEAKPFKTFHNALDHEF-NLRIALELHLKRLLVGGFEKVFEIGRNYRNEGISVKHNP 259

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
            EF  L+   ++ +  D++  +E++L G+ +       V 
Sbjct: 260 -EFTMLEAYWAYADYHDMMALVEDLLSGLVQHLFGSTQVQ 298



 Score = 43.9 bits (102), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  GIDR+ M+L   +++R+V LFP+
Sbjct: 449 ALEYGMPPAAGMGLGIDRLAMVLTNQESIRDVILFPL 485


>gi|317010462|gb|ADU84209.1| lysyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 501

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ + D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKVEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSIHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFEMEGFLEVETPMMHPI-PGGANARPFITYHNALEIERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL GAK++++V LFP
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|225350977|ref|ZP_03742000.1| hypothetical protein BIFPSEUDO_02556 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158433|gb|EEG71675.1| hypothetical protein BIFPSEUDO_02556 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 558

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 103/245 (42%), Gaps = 33/245 (13%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I + A + PLP    ++  E  R +  ++ +  D   +N+V+ R++ +
Sbjct: 181 TGELSVFATEWAIAAKALQ-PLPAL-HKDLNEDTRTRKPYIGMIADEKMRNMVRNRSKAV 238

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R      +F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 239 ASLRKTFADHDFLEVETPMLQTVHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 297

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           G DR F+I   FR+E   +   P        E + VE               ++ + N +
Sbjct: 298 GIDRVFEINRDFRNEGVDATHAP--------EFTMVE--------------AYQAYGNYD 335

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           T+     ++  D A+  +GT K      + + + +E+    E++  S   S++       
Sbjct: 336 TIGALVKQLVQDTAMDVFGTHK------VTLLDGSEYDFGGEWKTISMYDSLSEALGEEI 389

Query: 329 IPAKG 333
           +P  G
Sbjct: 390 VPNGG 394



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 467 KWDLYVRGFELATG--YSELNDPVVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 524

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 525 PAGGMGMGIDRLLIALTGA-TIRETITFPL 553


>gi|188526988|ref|YP_001909675.1| lysyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|238691889|sp|B2US13|SYK_HELPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|188143228|gb|ACD47645.1| lysyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|308061473|gb|ADO03361.1| lysyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 501

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFETEGFLEVETPMMHPI-PGGANARPFITYHNALEIERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|72080735|ref|YP_287793.1| asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|123747980|sp|Q4A7W9|SYN_MYCH7 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|71913859|gb|AAZ53770.1| asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 449

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 18/272 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GW+  +R +  IIF+++ D   +   Q V   +   F+  +++     + I G+  
Sbjct: 20  VLIQGWITNIRGNLKIIFVELNDGSSFKNLQCVLKKEFIDFDKIENLALGVAVEISGIFS 79

Query: 79  SRSAETINANIITGQIELSAQK--IEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +         ++   +E+             +E+ L V   R+ P    F++R       
Sbjct: 80  NTPERQQFGEVLVETLEIKGNNYNTNFPIQNQEISLEVL--RQMP---HFRHR------S 128

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
            L + I+K R+ +   +      + FI  S PILT++  EGA +  +    N+  F    
Sbjct: 129 RLFRAIMKLRSALFFEIHKFFRRQGFINFSAPILTSNDGEGAGEVFIVDDENKDFFNKKT 188

Query: 196 Q--APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                 Q      A GF + +  AP FR E   + R   EF+ ++ E++F   + I+   
Sbjct: 189 TLGVTGQLHAEAYALGFKKVYTFAPTFRAERSNTRRHAAEFWMIEPEVAFFTLEQIIELA 248

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             +L+ V +     N     FL    D  +R+
Sbjct: 249 VKLLQKVIKSVIIRNKDEFIFLEKAGDKNLRK 280


>gi|330968991|gb|EGH69057.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 500

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 20/260 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E    V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLPEETLAEVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTSVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L T      A+ F           + L  AP+ Y + L+  GF++ F+
Sbjct: 194 MKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRY 286
           V      F+R+   D+I +Y
Sbjct: 312 VFHFGEPFVRLSVFDSILKY 331



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 408 RFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   G+DR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGVDRLVMLLTDSPSIRDVILFP 494


>gi|323143524|ref|ZP_08078204.1| lysine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322416718|gb|EFY07372.1| lysine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 508

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 112/252 (44%), Gaps = 21/252 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEW 69
            +D  +F  ++G +   R  G   F  ++D  G  Q+     A P+    E+ K +    
Sbjct: 60  AADPKTFT-VAGRMMTRRIMGKASFATLQDMGGKIQIYVTRDALPEGQYQELFKKLDLGD 118

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           ++ + G               TG++ L    + +L V    PLP   +    +  R + R
Sbjct: 119 IIGVTGYAFKTK---------TGELTLHVTALRLL-VKALRPLPEKYKGLTDQEARCRQR 168

Query: 130 FLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186
           +LDL  +   +   + RT+I++ +R  M +  F+E  TP++    P GA  + F+     
Sbjct: 169 YLDLIANEESRRTFEIRTKIVSFIRSYMDSHRFMEVETPMMHVI-PGGANAKPFITHHNA 227

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  AP+ + + L+  GF+R ++I   FR+E       P EF  ++  M++ + 
Sbjct: 228 LDIDMY-LRIAPELFLKRLVVGGFERVYEINRNFRNEGIDVRHNP-EFTMMEFYMAYHDY 285

Query: 247 DDILNTMENVLR 258
            D+++  E++ R
Sbjct: 286 HDLIDFTEDLFR 297



 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 21/36 (58%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A Q G+PP  G   GIDR VML      +R+V LFP
Sbjct: 467 ALQHGLPPTAGEGIGIDRTVMLFTNCHTIRDVILFP 502


>gi|303284285|ref|XP_003061433.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456763|gb|EEH54063.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 521

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 121/284 (42%), Gaps = 13/284 (4%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H+  + GV   G    + G V   R  G + FL I D  G  Q+  +      +   + +
Sbjct: 41  HASVENGVEVEGVTDAVCGRVKARRVFGKLAFLSIEDDGGAIQLYLDVKRVDAKNPGTFK 100

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               LC  G ++   A         G++ +   + E+L+ +  LPLP   +       R+
Sbjct: 101 RIVDLCDMGDIVG--ARGTVKRTEKGELSIVVDEFEMLTKSL-LPLPDKFKGLTDVETRY 157

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL      +++ + R  I++ +R  +    F+E  TP+L + +  G  D    S 
Sbjct: 158 RQRYLDLIASPEVRDVFRTRAGIVSGIRRFLDDRAFMEMETPVLESRA--GGADAKPFST 215

Query: 186 VNQ--GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            +   G    L  A + + + L+  GF+R +++   FR+E   +   P EF  +++  ++
Sbjct: 216 FHNALGMDLTLRIATELHLKRLVVGGFERVYEMGRIFRNEGISTRHNP-EFTSVEVYQAY 274

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
            +  D+L   E+++    E    G    N  L I Y D I   G
Sbjct: 275 ADVSDMLELTEDMICAAAERACPG----NENLSIPYGDEIIHLG 314



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 4/60 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           L+AF +     E+ E+       A + GMPP GG+  G+DR+VMLL  + ++R+V  FP+
Sbjct: 461 LRAFEDDDYPIELDED----FVTALEYGMPPTGGMGLGVDRLVMLLTNSASIRDVIAFPL 516


>gi|212529550|ref|XP_002144932.1| lysyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210074330|gb|EEA28417.1| lysyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 602

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 117/259 (45%), Gaps = 22/259 (8%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIA-----KSVRSEWVLC 72
           + V+++G +   R  G  + F D+R      Q++     A  ++      + +R   ++ 
Sbjct: 124 TVVQVAGRIENKRSAGTKLFFYDLRAEGIKLQILCQAQYATGDVPFADQHEQLRRGDIIG 183

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFL 131
           I G     + +T +     G++ + A ++++L+     LP  +          RF+ R+L
Sbjct: 184 ITGFPGRSNPKTRDE----GELSIFATQVKLLAPCLHALPRGL-----QDSETRFRQRYL 234

Query: 132 DL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQ 188
           DL   ++  K    R +I+  +R    + +F E  TP++ A +    A+ F+   +  N 
Sbjct: 235 DLIMNESSRKVFTTRAKIVRYVRNFFDSRDFTEVETPMMNAIAGGATAKPFITHHNEYNT 294

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             F  +  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D
Sbjct: 295 NLFMRV--APELYLKMLIVGGLERVYELGRQFRNEGADLTHNP-EFTTCEFYWAYADVYD 351

Query: 249 ILNTMENVLRGVFEEFSNG 267
           ++N  E ++ G+ +  + G
Sbjct: 352 VMNLTEELVSGLVKHVTGG 370



 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + + G+PP GG   GIDR+VM L     +REV  FP  ++
Sbjct: 536 SLEYGLPPTGGWGMGIDRLVMFLTNNHTIREVLTFPFMKD 575


>gi|257470486|ref|ZP_05634577.1| asparaginyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317064694|ref|ZP_07929179.1| asparaginyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313690370|gb|EFS27205.1| asparaginyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 463

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 120/308 (38%), Gaps = 59/308 (19%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDG-LV 77
           + +SGW+ ++R      F++I D   +   Q+V +     F+    +     + ++G LV
Sbjct: 21  IEISGWIKKIRVQKNFGFIEINDGSFFKGIQIVFDTKLNNFDEISRLSIISSIRVNGKLV 80

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            S+ A         GQ IE+ A  +EI   A+ L  P+  +R   E +R K   L  R +
Sbjct: 81  RSQGA---------GQDIEIIANGVEIYQKAD-LDYPLQNKRHTFEYLRTKAH-LRPRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T       R+ I  ++        F+   TPI+T S  EGA +     RV       LP+
Sbjct: 130 TFSAVFRVRSVIAYAIHKFFQENGFVYVHTPIITGSDAEGAGEMF---RVTTLDLNDLPK 186

Query: 197 APQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                                  Q       + F   +   P FR E   + R   EF+ 
Sbjct: 187 GEDGKVDSSKDFFGKETNLTVSGQLSGETYCAAFRNIYTFGPTFRAEYSNTARHASEFWM 246

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFL 275
           ++ E++F + +  +   E +++ + +          EF N            N ++++F 
Sbjct: 247 IEPEIAFADLEANMELAEAMVKYIIKYVLEQCPEEMEFFNQFIEKGLFDKLNNVLNSDFG 306

Query: 276 RICYDDAI 283
           R+ Y +AI
Sbjct: 307 RLTYTEAI 314



 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G  R    E++    + +G++ E     +G      + G  PH G   
Sbjct: 378 DLLAPGIGEIIGGSQREDNLEILEGRINELGMNTE----DYGFYLDLRKYGSFPHSGYGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R++M + G  N+R+V  FP + N
Sbjct: 434 GFERMIMYVTGMTNIRDVIPFPRTPN 459


>gi|311896806|dbj|BAJ29214.1| putative lysyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 530

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 7/91 (7%)

Query: 479 AFQYDLVCNGFEIASGGIR-----NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           A ++DLV  G EI +            + +  Q+    G   E ++     L RA +  M
Sbjct: 414 AEKWDLVIFGTEIGTAYSELIDPVEQRARLTAQSLLAAGGDVEAMQLDEDFL-RALEYAM 472

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP GG+  G+DR++MLL G KN+RE  LFP+
Sbjct: 473 PPTGGLGLGVDRLIMLLTG-KNIRETVLFPL 502


>gi|229588762|ref|YP_002870881.1| lysyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|229360628|emb|CAY47486.1| lysyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 500

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 119/260 (45%), Gaps = 20/260 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   +   SV++ W +   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLSEDTLASVKT-WDM---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTSVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA-LPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L  + P GA      +  N       L  AP+ Y + L+  GF++ F+
Sbjct: 194 MQRDFLEVETPMLQ-TIPGGAAAKPFETHHNALDLEMFLRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRY 286
           V      F+R+   D+I +Y
Sbjct: 312 VFHFGEPFVRLSVFDSILKY 331



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 458 RALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFP 494


>gi|54013883|dbj|BAD55253.1| putative lysyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 488

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 5/163 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLPV   +E  E  R + R++DL  R    +    R  ++ ++R  +    F+E  TP+L
Sbjct: 134 PLPV-AHKEMNEESRVRQRYVDLIVRPEARQMARTRVAVVRALRNALERRGFLEVETPML 192

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T      AR F+  S       Y L  AP+ + +  +  G ++ F+I   FR+E   S 
Sbjct: 193 QTLHGGAAARPFVTHSNALDMDLY-LRIAPELFLKRCVVGGLEKVFEINRNFRNEGADST 251

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
             P EF  L+   ++   DD    +  +++ V +E      V+
Sbjct: 252 HSP-EFAMLETYEAYGTYDDSATMIRELIQEVAQEALGTQVVT 293



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL------YRAFQCGMP 534
           ++DL   GFE+A+G   + + + ++Q    V  ++   +     +        A + GMP
Sbjct: 396 KWDLYVRGFELATG--YSELVDPVIQRERFVDQARLAAQGDDEAMVLDEDFLAAMEHGMP 453

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P  G   GIDR++M L G   +RE  LFP+
Sbjct: 454 PTTGTGMGIDRLLMALTGL-GIRETILFPI 482


>gi|89073955|ref|ZP_01160461.1| asparaginyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89050283|gb|EAR55787.1| asparaginyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 466

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 109/275 (39%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV-------RSE 68
           V S V + GW+   R    GI FL I D             +CF+  ++V         E
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNELNNYQE 63

Query: 69  WVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
            VL +          TI A+   GQ  EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGTIVASPAKGQDFELAATNVKVVGWVEDADSYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + FI  S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNSLSQAIHRFYHEQGFIWMSAPLITASDCEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     +    + +        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMANLPMTDKGEVDFDKDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + DD     E++L+ VF+
Sbjct: 241 SRHLAEFWMVEPEVAFADLDDAAKLAEDMLKYVFK 275


>gi|226951466|ref|ZP_03821930.1| lysyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226837759|gb|EEH70142.1| lysyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 508

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)

Query: 125 RFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFL 181
           +++ R+LDL   +   K    R +++  +R  +  E F+E  TP++    P GA  + F+
Sbjct: 168 KYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHVI-PGGASAKPFV 226

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   
Sbjct: 227 THHNALDMELY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEFYQ 284

Query: 242 SFVEQDDILNTMENVL 257
           ++ +  D++   EN+L
Sbjct: 285 AYADYKDLMELTENML 300



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 467 ALEYGLPPTAGEGIGIDRLVMLFANAPSIRDVLLFP 502


>gi|222874194|gb|EEF11325.1| predicted protein [Populus trichocarpa]
          Length = 178

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 18/124 (14%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
           + K I   H P T  Q  +  +   D    + F++     G E+A+G   N +++   Q 
Sbjct: 59  QNKPIAVYHFPAT--QAALAQISSEDHRVAERFEF--YYKGIELANG--FNELTDAQEQE 112

Query: 508 F---------SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
                       +G+ +  +++RF G   A Q G+P   G+A G+DR++ML LGA+N+ E
Sbjct: 113 HRFNQDNRLREQLGLPQHEIDHRFLG---ALQAGLPNTAGVALGVDRLIMLALGAENISE 169

Query: 559 VSLF 562
           V  F
Sbjct: 170 VISF 173


>gi|238595914|ref|XP_002393908.1| hypothetical protein MPER_06285 [Moniliophthora perniciosa FA553]
 gi|215462078|gb|EEB94838.1| hypothetical protein MPER_06285 [Moniliophthora perniciosa FA553]
          Length = 155

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 5/78 (6%)

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNT 252
           L Q+PQ  KQ+ +A+ F+R ++I P FR ED  + R   EF  LD+EM+  E   +++  
Sbjct: 8   LAQSPQLAKQMCIAADFERVYEIGPVFRAEDSNTHRHLTEFMGLDLEMAIEEHYHEVMEL 67

Query: 253 ME----NVLRGVFEEFSN 266
           ++    ++ RG+ E++  
Sbjct: 68  LDGLFISIFRGLREKYKK 85


>gi|145356687|ref|XP_001422558.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582801|gb|ABP00875.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 582

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 14/175 (8%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-----RDTLHKNIVKRT 146
           G++ L     EIL+   ++ LP F   +  E+ RF+ RFLDL      RDT +     R+
Sbjct: 189 GELSLFPSNFEILTPCLKM-LPGFSGLKDVET-RFRMRFLDLMMNNEVRDTFYI----RS 242

Query: 147 RIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
            II  +R  +   +F+E  TP++   +    AR F+        + Y +  AP+ Y + L
Sbjct: 243 NIIRYIRKYLDDRDFLEVETPMMNMIAGGATARPFITHHNDLNMTLY-MRIAPELYLKQL 301

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +  G +R ++I   FR+E       P EF   +   ++ + DD++   E ++ G+
Sbjct: 302 VVGGIERVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADYDDLMQMTEEMISGM 355



 Score = 44.3 bits (103), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           ++ + G+PP GG   G+DR+ MLL    N++EV LFP
Sbjct: 528 QSLEYGLPPTGGWGLGVDRLTMLLADKNNIKEVLLFP 564


>gi|323344925|ref|ZP_08085149.1| lysine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323094195|gb|EFZ36772.1| lysine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 578

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP
Sbjct: 460 RALQYGMPPTSGIGIGIDRLVMLMTGKTTIQEVLFFP 496



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 123/293 (41%), Gaps = 43/293 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKSVRSEWV-----L 71
           V ++G +   R  G   F +++D  G  QV    D  C     E+  +V    +     +
Sbjct: 54  VVIAGRMMTRRVMGKASFAELQDSKGRIQVYITRDDICPGDNKELYNTVFKRLLDIGDFI 113

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPES 123
            + G V             TG+I + A+ + +LS + + PLP+        +   + PE 
Sbjct: 114 GVKGFVFKTQ---------TGEISVHAKSLTVLSKSLK-PLPIVKYKDGVAYDRFDDPE- 162

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
           +R++ R++DL   D + +  +KR  I+ +MR  +    + E  TP L   +    AR F+
Sbjct: 163 LRYRQRYVDLVVNDGVKETFLKRAVILRTMRRILDDAGYTEVETPTLQNIAGGASARPFI 222

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG--------E 233
                     Y +  A + Y + L+  GF+  ++I   FR+E       P         +
Sbjct: 223 THFNALNVDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNPEFTCIELYVQ 281

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIR 284
           +   +  M F E+  +L T+   + G  E+  +G  VS    + R+   DAI+
Sbjct: 282 YKDYNWMMEFTEK--MLETICIAVNGKPEQMIDGQLVSFKAPYRRLPILDAIK 332


>gi|18978323|ref|NP_579680.1| asparagine synthetase A [Pyrococcus furiosus DSM 3638]
 gi|42543102|pdb|1NNH|A Chain A, Hypothetical Protein From Pyrococcus Furiosus Pfu-1801964
 gi|18894151|gb|AAL82075.1| partial asparaginyl-tRNA synthetase matches COOH terminus
           [Pyrococcus furiosus DSM 3638]
          Length = 294

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 14/180 (7%)

Query: 145 RTRIINSMRCRMIAENFIECS----TPILTASSPEGARDFLVPSRVN-QGSFYALPQAPQ 199
           +T+I+  M    + E F        +PI     P+ A + + P+ V   G    L  +  
Sbjct: 18  QTKILEYMTDFFVKEGFKWLLPVIISPITDPLWPDPAGEGMEPAEVEIYGVKMRLTHSMI 77

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            +KQL +A G  + F ++P  R E  + D  R   EF QLD E+   + +DI+  +E ++
Sbjct: 78  LHKQLAIAMGLKKIFVLSPNIRLESRQKDDGRHAYEFTQLDFEVERAKMEDIMRLIERLV 137

Query: 258 RGVF---EEFSNGN-TVSNNFLRICYDDAIRRYGTDKP---DLRNPIIMHNVTEHFVHSE 310
            G+F   EE++      +  F    Y + +  +G+D+    ++  P  + N+   F   E
Sbjct: 138 YGLFRKAEEWTGREFPKTKRFEVFEYSEVLEEFGSDEKASQEMEEPFWIINIPREFYDRE 197



 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 7/85 (8%)

Query: 482 YDLVCN-GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG-MPPHGG 538
           YDL+   G+ E+ASGG R    E ++      G++    E+ F       + G + P  G
Sbjct: 205 YDLILPYGYGEVASGGEREWEYEKIVAKIRKAGLN----EDSFRPYLEIAKAGKLKPSAG 260

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
              G++R+V  ++GAK++ EV  FP
Sbjct: 261 AGIGVERLVRFIVGAKHIAEVQPFP 285


>gi|261837632|gb|ACX97398.1| lysyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 501

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFEMEGFLEVETPMMHPI-PGGANARPFITYHNALEIERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|319426567|gb|ADV54641.1| asparaginyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 466

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 107/280 (38%), Gaps = 48/280 (17%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    GI FL + D             +CF   + V    + 
Sbjct: 12  GEHAVGSKVTVRGWVRTRRDSKAGISFLAVYD------------GSCFNPIQGVVPNSLE 59

Query: 72  CIDGLVMSRSAETINANIITGQI----------ELSAQKIEILS-VAEELPLPVFGEREY 120
             D  V+  +A    + ++TG +          EL   ++E+   V +    P+  +R  
Sbjct: 60  NYDNEVLKLTAGC--SVVMTGDVVESPGAGQAFELQVTELEVAGWVDDPDTYPMAAKRHS 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGAR 178
            E +R       LR  T     V R R  +  ++      E FI  STP++TAS  EGA 
Sbjct: 118 IEHLR---ELAHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAG 174

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFR 221
           +    S ++  +     +    Y +        L  SG            + +   P FR
Sbjct: 175 EMFRVSTLDMENLPRTSEGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFR 234

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            E+  + R   EF+ ++ E++F    DI    E +L+  F
Sbjct: 235 AENSNTSRHLAEFWMVEPEVAFATLSDIAGLAEAMLKYAF 274


>gi|299472298|emb|CBN79710.1| Lysyl-tRNA ligase [Ectocarpus siliculosus]
          Length = 849

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 76/145 (52%), Gaps = 6/145 (4%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARD 179
           +  R++ R+LDL  +   + + + R++++N +R  +    F+E  TP++   +    A+ 
Sbjct: 210 QETRYRQRYLDLMTNDETRRVFQVRSKVVNYIRSFLDERGFLEVETPMMNMVAGGATAKP 269

Query: 180 FLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           F+   + +N   F  +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +
Sbjct: 270 FVTHHNDLNLDLFMRV--APELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCE 326

Query: 239 MEMSFVEQDDILNTMENVLRGVFEE 263
              ++ + +D+++  E ++ G+ ++
Sbjct: 327 FYQAYADYEDLMSMTEQMISGMVKK 351



 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   G+DR+ M L    N++EV LFP
Sbjct: 519 AMEYGLPPTAGWGVGVDRLTMFLSDKNNIKEVLLFP 554


>gi|298372906|ref|ZP_06982896.1| asparagine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275810|gb|EFI17361.1| asparagine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 465

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 104/264 (39%), Gaps = 31/264 (11%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D G+ + + GWV   R +  + F+ + D   +  +         ++ K    +  L   G
Sbjct: 14  DFGNEINVKGWVRTRRGNKNVSFVALNDGSTVNNI-----QIVVDVTKFPEEQLKLITTG 68

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVA--EELPLPVFGER-EYPESIRFKYRFL 131
             +S     +  ++  GQ +E+ A++I +   A  EE PL   G   EY   I      L
Sbjct: 69  AALSVCG-VLTESLGQGQSVEIQAREIVVYGTANPEEYPLQKKGHTLEYLRDIAH----L 123

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---- 187
             R +T       R ++  ++        F+   TPI+TAS  EGA      +  N    
Sbjct: 124 RPRTNTFGAIFRMRHQMAMAIHTFFHTRGFVYFHTPIITASDCEGAGQMFQVTTQNLYNL 183

Query: 188 ----------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+  P A     QL   L A      +   P FR E+  + R   EF
Sbjct: 184 KKDESGQIDYSSDFFGQPTALTVSGQLEGELGAMALGAIYTFGPTFRAENSNTPRHLAEF 243

Query: 235 YQLDMEMSFVEQDDILNTMENVLR 258
           + ++ E++F+E ++ +   ++ ++
Sbjct: 244 WMIEPEVAFIEIEENMQLAQDFVQ 267


>gi|242056371|ref|XP_002457331.1| hypothetical protein SORBIDRAFT_03g005713 [Sorghum bicolor]
 gi|241929306|gb|EES02451.1| hypothetical protein SORBIDRAFT_03g005713 [Sorghum bicolor]
          Length = 132

 Score = 50.1 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/45 (48%), Positives = 26/45 (57%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ 49
           R   CG+LG  D G  VRL GWV   R H G+ FL +RD  G+ Q
Sbjct: 86  RDALCGELGAGDAGRRVRLCGWVALRRAHAGLTFLTLRDRSGMVQ 130


>gi|289675204|ref|ZP_06496094.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 500

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 20/260 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E    V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLPEETLAEVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTSVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L T      A+ F           + L  AP+ Y + L+  GF++ F+
Sbjct: 194 MKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRY 286
           V      F+R+   D+I +Y
Sbjct: 312 VFHFGEPFVRLSVFDSILKY 331



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 408 RFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTDSPSIRDVILFP 494


>gi|294650990|ref|ZP_06728330.1| lysine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292823091|gb|EFF81954.1| lysine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 508

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)

Query: 125 RFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFL 181
           +++ R+LDL   +   K    R +++  +R  +  E F+E  TP++    P GA  + F+
Sbjct: 168 KYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHVI-PGGASAKPFV 226

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   
Sbjct: 227 THHNALDMELY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEFYQ 284

Query: 242 SFVEQDDILNTMENVL 257
           ++ +  D++   EN+L
Sbjct: 285 AYADYKDLMELTENML 300



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 467 ALEYGLPPTAGEGIGIDRLVMLFANAPSIRDVLLFP 502


>gi|154486811|ref|ZP_02028218.1| hypothetical protein BIFADO_00639 [Bifidobacterium adolescentis
           L2-32]
 gi|154084674|gb|EDN83719.1| hypothetical protein BIFADO_00639 [Bifidobacterium adolescentis
           L2-32]
          Length = 559

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/264 (21%), Positives = 108/264 (40%), Gaps = 33/264 (12%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I + A + PLP    ++  E  R +  ++ +  D   +N+V+ R++ +
Sbjct: 182 TGELSVFATEWAIAAKALQ-PLPAL-HKDLNEDTRTRKPYIGMIADEKIRNMVRNRSKAV 239

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R      +F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 240 ASLRKTFADHDFLEVETPMLQTVHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 298

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           G DR F+I   FR+E   +   P        E + VE               ++ + N +
Sbjct: 299 GIDRVFEINRDFRNEGVDATHAP--------EFTMVE--------------AYQAYGNYD 336

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           T+     ++  D A+  +G+ K      + + + TE+    E++  S   S++       
Sbjct: 337 TIGALVKQLVQDTAMDVFGSHK------VTLLDGTEYDFGGEWKTISMYDSLSEALGEEI 390

Query: 329 IPAKGGGGNRAFCDRMNEWARSQG 352
           +P  G        + + E A   G
Sbjct: 391 VPNGGPDNPGTSVEHLGEIADKLG 414



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 468 KWDLYVRGFELATG--YSELNDPVVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 526 PAGGMGMGIDRLLIALTGA-TIRETITFPL 554


>gi|83719490|ref|YP_442413.1| lysyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167581336|ref|ZP_02374210.1| lysyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
 gi|167619418|ref|ZP_02388049.1| lysyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257138615|ref|ZP_05586877.1| lysyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|123767660|sp|Q2SXD6|SYK_BURTA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|83653315|gb|ABC37378.1| lysyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 508

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFITGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 22/284 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q    P     E   + + +W L   G +++ 
Sbjct: 68  VAIAGRMMLKRVMGKASFATVQDGSGQIQFFVTPADVGAETYDAFK-KWDL---GDIVAA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N   G++ +   ++ +L+ A   PLP        +  R++ R++DL      +
Sbjct: 124 RGVLFRTN--KGELSVKCTQLRLLAKALR-PLPDKFHGLADQETRYRQRYVDLIVTPETR 180

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQA 197
              + RT+ I S+R  M   +F+E  TP+L    P GA  + F+          + L  A
Sbjct: 181 TTFRARTKAIASIRKFMGDADFMEVETPMLH-PIPGGAAAKPFVTHHNALDMEMF-LRIA 238

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E ++
Sbjct: 239 PELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDFTERLI 297

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
           R    +     T+         +  F R+    AI++Y     D
Sbjct: 298 RQAAVDALGTATIQYQGRELDLAQPFHRLTITQAIQKYAPSYTD 341


>gi|86146279|ref|ZP_01064604.1| asparaginyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85835990|gb|EAQ54123.1| asparaginyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 466

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 105/277 (37%), Gaps = 50/277 (18%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V          
Sbjct: 16  VDSEVTIRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYED 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKIVESPAKGQDFELAATDVKVVGWVEDADTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + F   S P++TAS  EGA +     
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGFFWTSAPLITASDAEGAGEMF--- 177

Query: 185 RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDED 224
           RV+      LP+  +                    Q      A    + +   P FR E+
Sbjct: 178 RVSTLDMENLPRTDEGKVDFNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
             + R   EF+ ++ E++F + DD+    E++L+ VF
Sbjct: 238 SNTSRHLAEFWMVEPEVAFADLDDVAKLAEDMLKYVF 274


>gi|66044559|ref|YP_234400.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75503030|sp|Q4ZWW0|SYK_PSEU2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|63255266|gb|AAY36362.1| Lysyl-tRNA synthetase, class-2 [Pseudomonas syringae pv. syringae
           B728a]
          Length = 500

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 20/260 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E    V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLPEETLAEVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTSVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L T      A+ F           + L  AP+ Y + L+  GF++ F+
Sbjct: 194 MKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRY 286
           V      F+R+   D+I +Y
Sbjct: 312 VFHFGEPFVRLSVFDSILKY 331



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 408 RFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTDSPSIRDVILFP 494


>gi|148264203|ref|YP_001230909.1| tRNA synthetase, class II (D, K and N) [Geobacter uraniireducens
           Rf4]
 gi|146397703|gb|ABQ26336.1| tRNA synthetase, class II (D, K and N) [Geobacter uraniireducens
           Rf4]
          Length = 307

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 12/141 (8%)

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQG 189
           L  R++TL      R+ II  +R   I E ++E  TP+ + A +PE   + +   R    
Sbjct: 7   LTRRKETLRG----RSTIIQEIRRFFIKEGYLEVDTPLRIPAPAPESYIEAIPSGR---- 58

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             + L  +P+   + ++A+G++R FQI  C+RD +     LP EF  L+      +  D+
Sbjct: 59  --WFLHTSPELCMKRMLAAGYERIFQICRCWRDGERGIRHLP-EFTMLEWYRIDADYRDL 115

Query: 250 LNTMENVLRGVFEEFSNGNTV 270
           ++  E ++R V     +G ++
Sbjct: 116 MSECEALIRSVIHVLGHGGSI 136


>gi|317013602|gb|ADU81038.1| lysyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 501

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFEMEGFLEVETPMMHPI-PGGANARPFITYHNALEIERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|224025132|ref|ZP_03643498.1| hypothetical protein BACCOPRO_01866 [Bacteroides coprophilus DSM
           18228]
 gi|224018368|gb|EEF76366.1| hypothetical protein BACCOPRO_01866 [Bacteroides coprophilus DSM
           18228]
          Length = 467

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 110/277 (39%), Gaps = 36/277 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L   D G  V + GWV   R    + F+ + D   I  V    D A F  E+ 
Sbjct: 6   RTKIVDLLKRRDFGVMVNVKGWVRTRRGSKQVSFIALNDGSTINNVQVVVDLANFDEEML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEE-LPLPVFGEREY 120
           K + +   + ++G ++    E++ A    GQ  E+ A++IE+L   +   PL   G    
Sbjct: 66  KQITTGACISVNGELV----ESVGA----GQACEIQAREIEVLGTCDNTYPLQKKGH--- 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGAR 178
             S+ F      LR  T     V R R  +  ++        F    TP++TAS  EGA 
Sbjct: 115 --SMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPLITASDCEGAG 172

Query: 179 DFLVPSRVN--------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221
                + +N                 F+    +     QL   L A+     +   P FR
Sbjct: 173 QMFQVTTMNLYDLKKDENGSIIYDNDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            E+  + R   EF+ ++ E++F + +D ++  E  ++
Sbjct: 233 AENSNTPRHLAEFWMIEPEVAFNDINDNMDLAEEFIK 269


>gi|198277517|ref|ZP_03210048.1| hypothetical protein BACPLE_03739 [Bacteroides plebeius DSM 17135]
 gi|198270015|gb|EDY94285.1| hypothetical protein BACPLE_03739 [Bacteroides plebeius DSM 17135]
          Length = 467

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 107/275 (38%), Gaps = 32/275 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F+    
Sbjct: 6   RTKIVDLLKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLANFD---- 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEE-LPLPVFGEREYPE 122
                 L   G  +S + E + + + +GQ  E+ A++IE+L   +   PL   G      
Sbjct: 62  -EDLLKLITTGACLSVNGELVKS-VGSGQAAEIQAREIEVLGTCDNTYPLQKKGH----- 114

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           S+ F      LR  T     V R R  +  ++        F    TP++TAS  EGA   
Sbjct: 115 SMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPLITASDCEGAGQM 174

Query: 181 LVPSRVN--------------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDE 223
              + +N                 F+    +     QL   L A+     +   P FR E
Sbjct: 175 FQVTTMNLYDLKKDENGSIIYDNDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRAE 234

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +  + R   EF+ ++ E++F + +D ++  E  ++
Sbjct: 235 NSNTPRHLAEFWMIEPEVAFNDINDNMDLAEEFIK 269


>gi|254582717|ref|XP_002499090.1| ZYRO0E03476p [Zygosaccharomyces rouxii]
 gi|186703793|emb|CAQ43483.1| Zr_YCR024C [Zygosaccharomyces rouxii]
 gi|238942664|emb|CAR30835.1| ZYRO0E03476p [Zygosaccharomyces rouxii]
          Length = 463

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 118/277 (42%), Gaps = 24/277 (8%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANP--DSACFEIAK 63
           H+   L  S    FV ++GW+  +R    I F+D+RD      + +A P  D +  E  K
Sbjct: 6   HTIRALYDSGPQKFVDVNGWIQSIRQLKRIAFIDLRDGTSTKSLKIAVPLCDQSLIESVK 65

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSA----QKIEIL-SVAEELPLPVFGER 118
           ++++   + I        A+ +         EL      + I+IL +V  + PL    ++
Sbjct: 66  NLKTGQCVSIS------QAQWVPTPQREQPFELKVGDALKDIQILGNVTSQYPLQ---KK 116

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
            +  S       L  R + L   +  R+ + N+         F + + P++T+S  EG  
Sbjct: 117 SHSLSFLRTLPHLKHRSNYLGSLLRFRSHVENTFIQFFAQNEFTKVTPPLITSSDCEGGG 176

Query: 179 DFLVPSRVNQ---GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           +       N     S Y    A    + L +A   +R + ++P FR E   ++R   EF+
Sbjct: 177 ELFKVDGSNDYFGRSAYLTVSAQLHLEALSLA--LNRCYTLSPSFRAEKSDTNRHLCEFW 234

Query: 236 QLDMEMSFVEQ-DDILNTMENVLRGVFEE-FSNGNTV 270
            L+ E  FV   +++ +  +N+L+ V +  + N N +
Sbjct: 235 MLEAEWCFVRDVNELTHFTQNLLKSVIKSCYDNRNEL 271


>gi|50364845|ref|YP_053270.1| lysyl tRNA synthetase [Mesoplasma florum L1]
 gi|50363401|gb|AAT75386.1| lysyl tRNA synthetase [Mesoplasma florum L1]
          Length = 499

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 122/283 (43%), Gaps = 34/283 (12%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGL 76
           + ++G +   R  G    FL+I D     QV    D    A F   + +    ++   G+
Sbjct: 62  ISIAGRIKLYREAGNKAAFLNIEDQDSDIQVYVRQDEIGDAAFANFRELDLGDIVGFKGI 121

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRR 135
           +M  +          G++ L A++  +LS A   LP    G ++  E  +++ R++DL  
Sbjct: 122 MMKTNH---------GELSLRAKEYTLLSKALRPLPDKHAGIQDIEE--KYRRRYVDLIT 170

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193
           +   K + + RT+II +M+  +    ++E  TPIL +      A+ F+          Y 
Sbjct: 171 NPESKRVFQARTKIIRTMQQILDERGYMEVETPILHSVKGGAAAKPFITHYNALDVDVY- 229

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  A + + + L+  GFD  ++I   FR+E   +   P EF  L++ +++ +   +++  
Sbjct: 230 LRIATELHLKRLIVGGFDGVYEIGRIFRNEGMSTRHNP-EFTSLELYVAYEDMFFLMDLT 288

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           E + R         N   N       + ++  YG  K DL  P
Sbjct: 289 EEIFRKC-------NAAVN-------ESSVIEYGGHKLDLSKP 317



 Score = 45.1 bits (105), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A +  MPP  GI  GIDR+VMLL  ++++++V LFP
Sbjct: 458 ALEHAMPPTAGIGFGIDRLVMLLTNSESIKDVLLFP 493


>gi|308273517|emb|CBX30119.1| hypothetical protein N47_D29280 [uncultured Desulfobacterium sp.]
          Length = 313

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 8/106 (7%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFY 192
           R+  + KN+  R+ II  +R     +N++E  TP  ++A +PE   + +      +   Y
Sbjct: 13  RQTHIKKNLQLRSEIIQLIRLFFSEQNYLEVETPCRISAPAPEAYIEAI------ESENY 66

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            L  +P+ Y + L++SG+ + FQI  CFR  +  +  +P EF  L+
Sbjct: 67  FLQTSPELYMKRLISSGYPKIFQICRCFRQNERGAKHIP-EFTMLE 111


>gi|197284659|ref|YP_002150531.1| asparaginyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227356864|ref|ZP_03841243.1| asparaginyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|194682146|emb|CAR41761.1| asparaginyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227162934|gb|EEI47879.1| asparaginyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 466

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 107/268 (39%), Gaps = 32/268 (11%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           VG  V + GWV   R    GI FL + D   +   Q + N +   ++       E +   
Sbjct: 16  VGEDVTVRGWVRTRRDSKAGISFLTVYDGSCFNPVQAIINNNLPNYQ------DEVLHLT 69

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLD 132
            G  +  + + + +       E+ A K+ ++ + ++    P+  +R   E +R       
Sbjct: 70  TGCSVEVTGKIVESPGQGQNFEIHATKVVVVGMVDDPETYPMAAKRHSVEYLR---EVAH 126

Query: 133 LRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS------ 184
           LR  T     V R R  +  ++      + F   STP++TA+  EGA +    S      
Sbjct: 127 LRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITAADTEGAGEMFRVSTLDMNN 186

Query: 185 --RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
             R ++G       F+   A      Q      AS   + +   P FR E+  + R   E
Sbjct: 187 LPRTDKGEVDFSEDFFGREAFLTVSGQLNGETYASALSKVYTFGPTFRAENSNTSRHLAE 246

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVF 261
           F+ ++ E++F + +DI    E +L+  F
Sbjct: 247 FWMVEPEVAFADLNDIAGLAEKMLKYAF 274



 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 7/91 (7%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    E+  +  + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLEMFDKRLAEMGMNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G +R+V  + G  N+REV  FP +    D 
Sbjct: 436 LGFERLVAYVTGVTNIREVIPFPRTPRNVDF 466


>gi|269115179|ref|YP_003302942.1| Lysyl-tRNA synthetase [Mycoplasma hominis]
 gi|290457660|sp|P46191|SYK_MYCHP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|268322804|emb|CAX37539.1| Lysyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 488

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 133/293 (45%), Gaps = 27/293 (9%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y+  S  DL   ++  FV  +G +  +R      F+ ++D+ G  Q+ AN  +     
Sbjct: 42  EKYKNLSREDLDKQNL-EFV-FNGRIMTIRGP----FIVLQDNCGQMQIYANKKTLNESS 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREY 120
           AK+    + L   G ++S        N  T  + + AQ I +L+ + + PLP  F     
Sbjct: 96  AKT----FSLMDFGDILSVRGTLSKTN--TDALVIKAQDIVLLTKSLK-PLPDKFHGLVD 148

Query: 121 PESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGAR 178
           PE  R + R++DL  +   +N  V RT+II  +R    + N+IE  TPIL        A+
Sbjct: 149 PEERR-RQRYVDLIMNEKTRNTFVMRTQIIKGIREYFDSLNYIEVDTPILNPILGGAAAK 207

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+        +FY L  A +   + L+  G DR ++I   FR+E   +   P EF  ++
Sbjct: 208 PFITFYNALNRNFY-LRIATELPLKKLIVGGLDRVYEIGRIFRNEGVDTTHNP-EFTSIE 265

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFS------NGNTVSNN--FLRICYDDAI 283
              ++ +   ++   E V + +  +F+      NG  ++ N  F R+   DAI
Sbjct: 266 FYEAYSDLWGMMERTEGVFKHLINKFNIKEVKFNGFDITFNFPFKRVNMIDAI 318



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 27/41 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP GG   GIDR++MLL    ++R+V LFP  ++ 
Sbjct: 447 ALEYGMPPTGGSGIGIDRLIMLLTQNDSIRDVVLFPQLKDL 487


>gi|330959167|gb|EGH59427.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 500

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 20/260 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E    V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLPEETLAEVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTSVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L T      A+ F           + L  AP+ Y + L+  GF++ F+
Sbjct: 194 MKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRY 286
           V      F+R+   D+I +Y
Sbjct: 312 VFHFGEPFVRLSVFDSILKY 331



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 408 RFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTNSPSIRDVILFP 494


>gi|317012028|gb|ADU82636.1| lysyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 501

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ + D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKVEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSIHALEFHILSKTI-VPLPEKFHGLSDIELRYRRRYLDLIVNPSVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFEMEGFLEVETPMMHPI-PGGANARPFITYHNALEVERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|262368776|ref|ZP_06062105.1| lysyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262316454|gb|EEY97492.1| lysyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 508

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 19/226 (8%)

Query: 38  FLDIRDHYGITQV-VANPDSA--CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI 94
           F+ I+D  G  Q+ VA  + A    E  KS+    ++ + G +  RS +        G +
Sbjct: 88  FIVIQDMTGRIQLYVARKELAPETLETIKSLDLGDIIAVKGYI-GRSGK--------GDL 138

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMR 153
            +  +  E+L+ +   PLP          ++++ R+LDL   +   K    R ++++ +R
Sbjct: 139 YVHIEHFELLTKSLR-PLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVSGIR 197

Query: 154 CRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
             +  + F+E  TP++    P GA  R F           + L  AP+ Y + L+  GF+
Sbjct: 198 AFLTEQRFMEVETPMMHVI-PGGASARPFETHHNALDMPLF-LRIAPELYLKRLVVGGFE 255

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           R F+I   FR+E   +   P EF  ++   ++ +  D++   EN+L
Sbjct: 256 RVFEINRNFRNEGVSTRHNP-EFTMIEFYQAYADYKDLMELTENML 300



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 467 ALEYGLPPTAGEGIGIDRLVMLFANAASIRDVILFP 502


>gi|50311751|ref|XP_455904.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49645040|emb|CAG98612.1| KLLA0F18392p [Kluyveromyces lactis]
          Length = 588

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 89/177 (50%), Gaps = 7/177 (3%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRII 149
           G+I +   +I++L+     LP   FG ++  + +R++ R+LDL  +   +N  + R++II
Sbjct: 199 GEISVFVSRIQLLTPCLHMLPTDHFGFKD--QELRYRKRYLDLIMNKDARNRFITRSKII 256

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           + +R  +   NFIE  TP++   +    A+ F+          Y +  AP+ + + L+  
Sbjct: 257 SYVRKFLDTRNFIEVETPMMNVIAGGATAKPFVTHHNDLDMDMY-MRIAPELFLKELVVG 315

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           G DR ++I   FR+E       P EF   +   ++ +  D+++  E ++  + +E +
Sbjct: 316 GMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTEIMISEMVKEIT 371



 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  +  +REV LFP
Sbjct: 541 ALEYGLPPTGGWGCGIDRLAMFLADSNTIREVLLFP 576


>gi|152978960|ref|YP_001344589.1| asparaginyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704331|sp|A6VNV7|SYN_ACTSZ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|150840683|gb|ABR74654.1| asparaginyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 467

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 103/268 (38%), Gaps = 32/268 (11%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           VG  V + GWV   R    G+ FL + D   +   Q + N D   +E      SE +   
Sbjct: 17  VGEKVTVRGWVRTRRDSKAGLSFLTVYDGSCFNPIQAIINNDIVNYE------SEVLRLT 70

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLD 132
            G  +  +   + +      +EL  + +E++   E+    P+  +R    SI +      
Sbjct: 71  AGCSVIVTGTVVESPAQGQAVELQTETVEVVGWVEDPDTYPMAAKRH---SIEYLREVAH 127

Query: 133 LRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV---- 186
           LR  T     V R R  +  ++      + F   +TP++TAS  EGA +    S +    
Sbjct: 128 LRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLEN 187

Query: 187 -----------NQGSF--YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                      NQ  F   A      Q      A    + +   P FR E+  + R   E
Sbjct: 188 LPRTQAGTVDFNQDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAE 247

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVF 261
           F+ ++ E++F    D     E++L+ VF
Sbjct: 248 FWMVEPEIAFATLADNAKLAEDMLKYVF 275


>gi|149210307|ref|XP_001522528.1| hypothetical protein MGCH7_ch7g631 [Magnaporthe oryzae 70-15]
 gi|86196586|gb|EAQ71224.1| hypothetical protein MGCH7_ch7g631 [Magnaporthe oryzae 70-15]
          Length = 1454

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF-QCGMPPHGGIA 540
           YD    G EI SGG R H  E +       G+          G    F Q G+PPHGG  
Sbjct: 474 YDFFMRGQEIMSGGQRIHKPEEIEARMRRKGLDPN--SKGLKGYVNTFRQAGVPPHGGGG 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G+DR+V   L    V+  + +P + N
Sbjct: 532 IGLDRVVQFFLNLSTVQYAAFYPRTPN 558



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 3/113 (2%)

Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
           R  +    F E  +P +  ++ EG  +       ++  F A  Q+PQ YKQ  +A G  R
Sbjct: 259 RSYLKERGFHEFESPCIIEAASEGGANVFSADYFDKKVFLA--QSPQFYKQYEIAGGRQR 316

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEF 264
            F I P FR E+  + R   EF  LDMEM       ++ + +E V   +F E 
Sbjct: 317 VFCIGPVFRAENSNTPRHMTEFTGLDMEMVIKWHYHEVRDMLEGVFLHIFREL 369


>gi|294790611|ref|ZP_06755769.1| lysine--tRNA ligase [Scardovia inopinata F0304]
 gi|294458508|gb|EFG26861.1| lysine--tRNA ligase [Scardovia inopinata F0304]
          Length = 542

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 26/251 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYG------ITQVVANPDSACFEIAKSVRSEWVLCID 74
           V L+G V  +R  GG+ F+ +    G      I++ V  PDS   +  + V     L I 
Sbjct: 101 VGLAGRVLFLRNGGGLCFVQLSSGDGARIQGMISRKVVGPDS-LKQYKQLVDLGDHLYIH 159

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V+S +         TG++ +     +I S A + PLP    +E  E  R +  +L + 
Sbjct: 160 GKVISSN---------TGELSVMVDSWQIASKALQ-PLPAL-HKELSEEQRTRKPYLGMI 208

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
            D+  +++V+ R ++++S+R       ++E  TP+L T      AR F         + +
Sbjct: 209 VDSKARDMVRNRAKVVSSLRRNFDERGYLEAETPMLQTNHGGATARPFETHMNAFDINLF 268

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ + + L+  G D+ F+I   FR+E       P EF  ++   ++   D    T
Sbjct: 269 -MRIAPELFLKRLLVGGIDKVFEINRDFRNEGADGTHAP-EFTMVEAYEAYGTYD----T 322

Query: 253 MENVLRGVFEE 263
           M  + R + ++
Sbjct: 323 MAELTRSLVQQ 333



 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAF---SNVGISKEV----VENRFGGLYRAFQCGM 533
           ++DL   GFE+A+     +   V  Q F   + + ++ +     ++  F     A   GM
Sbjct: 449 KWDLYVRGFELATAYSELNDPVVQRQRFVDQARMALAGDAEAMDIDEDF---LEALGVGM 505

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 506 PPAGGMGMGIDRLLIALTGA-TIRETITFPL 535


>gi|254184374|ref|ZP_04890964.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|184214905|gb|EDU11948.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1655]
          Length = 508

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFVTGREIANGFSELNDPEDQAARFRKQVEQKDAGDEEAMFFDADYIRALEYGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 122/285 (42%), Gaps = 24/285 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q    P     E   + + +W L    +V +R
Sbjct: 68  VAVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPADVGAETYDAFK-KWDLG--DIVAAR 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                     T + ELS +  E+  +A+ L PLP        +  R++ R++DL      
Sbjct: 125 -----GVLFRTNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPET 179

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQ 196
           +   + RT+ I S+R  M   +F+E  TP+L    P GA  + F+          + L  
Sbjct: 180 RATFRARTKAIASIRKFMSDADFMEVETPMLH-PIPGGAAAKPFVTHHNALDMQMF-LRI 237

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E +
Sbjct: 238 APELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDFTERL 296

Query: 257 LRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
           +R    +     T+         +  F R+    AI++Y  +  D
Sbjct: 297 IRQAAVDALGTATIRYQGRELDLAKPFHRLTITQAIQKYAPNYTD 341


>gi|330950713|gb|EGH50973.1| lysyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 500

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 20/260 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E    V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLPEETLAEVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTSVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L T      A+ F           + L  AP+ Y + L+  GF++ F+
Sbjct: 194 MKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRY 286
           V      F+R+   D+I +Y
Sbjct: 312 VFHFGEPFVRLSVFDSILKY 331



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 408 RFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTDSPSIRDVILFP 494


>gi|297379407|gb|ADI34294.1| lysyl-tRNA synthetase [Helicobacter pylori v225d]
 gi|308063046|gb|ADO04933.1| lysyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 501

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFEMEGFLEVETPMMHPI-PGGANARPFITYHNALEIERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|260890988|ref|ZP_05902251.1| lysine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260859015|gb|EEX73515.1| lysine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 494

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 105/242 (43%), Gaps = 19/242 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVM 78
           + +G +   R  G   F  I+D  G  Q     D      +EI K +     + ++G + 
Sbjct: 55  KTAGRIVAFRRMGKNGFGQIQDPTGKIQYYVKKDEVGEEQYEIYKKMGLGDFIGLEGKLF 114

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRD 136
             +         TG++ L     E+LS     PLP           R++ R++DL   R+
Sbjct: 115 RTN---------TGELTLRVDSFEVLS-KNVRPLPEKFHGLTNIETRYRQRYVDLVMNRE 164

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
            +   + KR +II   R  +  + F E  TP++   +    AR F+          + L 
Sbjct: 165 VMD-TMKKRFQIIRFFRSYLEKQGFTEVETPMMHPVAGGATARPFVTHHNALDMELF-LR 222

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF++ F+I   FR+E       P EF  +++  ++ + +D+++  E+
Sbjct: 223 IAPELYLKRLLVGGFEKVFEINRSFRNEGISIKHNP-EFTMMELYQAYADFNDMMDLTED 281

Query: 256 VL 257
           ++
Sbjct: 282 LI 283



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VML   + ++R+V LFP
Sbjct: 449 RALEYGMPPAGGLGIGIDRLVMLQTNSASIRDVILFP 485


>gi|225870836|ref|YP_002746783.1| lysyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225700240|emb|CAW94458.1| lysyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 497

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    DS     ++I K       + ++G +M 
Sbjct: 65  IAGRLMTKRGKGKVGFAHLQDRQGQIQIYVRKDSVGDDNYDIFKKADLGDFIGVEGDIMC 124

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A K+  LS +   PLP  F      E+I ++ R LDL   R 
Sbjct: 125 TD---------MGELSIKATKLTHLSKSLR-PLPEKFHGLTDIETI-YRKRHLDLISNRS 173

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  + R+++I+ +R  +    F+E  TP+L   +   A    +     Q     L  
Sbjct: 174 SFER-FITRSKMISEIRRYLDGLGFLEVETPVLHNEAGGAAARPFITHHNAQDIDMVLRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  D++   E +
Sbjct: 233 APELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYEAYADYLDMMTLTEGI 291

Query: 257 LR 258
           ++
Sbjct: 292 IQ 293



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 431 LSRFKAQAAAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVL 490

Query: 561 LFP 563
           LFP
Sbjct: 491 LFP 493


>gi|238501880|ref|XP_002382174.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Aspergillus
           flavus NRRL3357]
 gi|220692411|gb|EED48758.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Aspergillus
           flavus NRRL3357]
          Length = 612

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 115/285 (40%), Gaps = 27/285 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VHR+R    ++F+ + D YG  Q +   D        ++     + I G +
Sbjct: 138 GTRVRVLGRVHRLRSQKDVVFITLTDGYGYLQCILTGDMVKAYDIMTLTLGTSMSIHGEM 197

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLDL 133
            +   +    N      EL A    I+  A    E +   V  + + P+++ +  R L L
Sbjct: 198 RAVPPKQHAPN----NRELHADFFTIIGRAAGDKEAITTRVAPDSD-PQTL-YDNRHLVL 251

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +T    +  R   + + R        +E + P +  +  EG           + ++  
Sbjct: 252 RGETASAVMKVRAATLRAFRKVFEENRMLEVTPPAMVQTQVEGGSTLFKFDYYGENAY-- 309

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  + S  D  F + P FR E   + R   E+  ++ E+ F+   D+L+ +
Sbjct: 310 LTQSSQLYLETCLPSLGD-VFCVCPSFRAEKSLTRRHLSEYTHIEAELDFITFTDLLDHL 368

Query: 254 ENVLRGVFE---------EFSNG-----NTVSNNFLRICYDDAIR 284
           E V+  V E          F N         S  F R+ Y DAI+
Sbjct: 369 EAVICRVIELILAEPETAAFINQLNPDFKPPSRPFRRMKYSDAIQ 413


>gi|53723795|ref|YP_103320.1| lysyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67642992|ref|ZP_00441742.1| lysine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|121601586|ref|YP_993519.1| lysyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124385926|ref|YP_001029052.1| lysyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126449902|ref|YP_001081027.1| lysyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126453655|ref|YP_001066898.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|134277392|ref|ZP_01764107.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167000660|ref|ZP_02266471.1| lysine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167846463|ref|ZP_02471971.1| lysyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|217420502|ref|ZP_03452007.1| lysine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|226195488|ref|ZP_03791076.1| lysine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|242314267|ref|ZP_04813283.1| lysine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254178151|ref|ZP_04884806.1| lysyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254191407|ref|ZP_04897911.1| lysyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254195944|ref|ZP_04902370.1| lysyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254200277|ref|ZP_04906643.1| lysyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254209353|ref|ZP_04915699.1| lysyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254357975|ref|ZP_04974248.1| lysyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81604733|sp|Q62IZ9|SYK_BURMA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229796|sp|A3ML91|SYK_BURM7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229797|sp|A2SAT3|SYK_BURM9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229798|sp|A1V5L6|SYK_BURMS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229799|sp|A3NX27|SYK_BURP0 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|52427218|gb|AAU47811.1| lysyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121230396|gb|ABM52914.1| lysyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124293946|gb|ABN03215.1| lysine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126227297|gb|ABN90837.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126242772|gb|ABO05865.1| lysine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|134251042|gb|EBA51121.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|147749873|gb|EDK56947.1| lysyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147750126|gb|EDK57197.1| lysyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148027102|gb|EDK85123.1| lysyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|157939079|gb|EDO94749.1| lysyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|160699190|gb|EDP89160.1| lysyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|169652689|gb|EDS85382.1| lysyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|217395914|gb|EEC35931.1| lysine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|225932448|gb|EEH28447.1| lysine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|238524227|gb|EEP87661.1| lysine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242137506|gb|EES23908.1| lysine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243063467|gb|EES45653.1| lysine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 508

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFVTGREIANGFSELNDPEDQAARFRKQVEQKDAGDEEAMFFDADYIRALEYGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 122/285 (42%), Gaps = 24/285 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q    P     E   + + +W L    +V +R
Sbjct: 68  VAVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPADVGAETYDAFK-KWDLG--DIVAAR 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                     T + ELS +  E+  +A+ L PLP        +  R++ R++DL      
Sbjct: 125 -----GVLFRTNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPET 179

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQ 196
           +   + RT+ I S+R  M   +F+E  TP+L    P GA  + F+          + L  
Sbjct: 180 RATFRARTKAIASIRKFMSDADFMEVETPMLH-PIPGGAAAKPFVTHHNALDMQMF-LRI 237

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E +
Sbjct: 238 APELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDFTERL 296

Query: 257 LRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
           +R    +     T+         +  F R+    AI++Y  +  D
Sbjct: 297 IRQAAVDALGTATIRYQGRELDLAKPFHRLTITQAIQKYAPNYTD 341


>gi|237813010|ref|YP_002897461.1| lysine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|237504206|gb|ACQ96524.1| lysine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 508

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFVTGREIANGFSELNDPEDQAARFRKQVEQKDAGDEEAMFFDADYIRALEYGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 122/285 (42%), Gaps = 24/285 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q    P     E   + + +W L    +V +R
Sbjct: 68  VAIAGRMMLKRVMGKASFATVQDGSGQIQFFVTPADVGAETYDAFK-KWDLG--DIVAAR 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                     T + ELS +  E+  +A+ L PLP        +  R++ R++DL      
Sbjct: 125 -----GVLFRTNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPET 179

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQ 196
           +   + RT+ I S+R  M   +F+E  TP+L    P GA  + F+          + L  
Sbjct: 180 RATFRARTKAIASIRKFMSDADFMEVETPMLH-PIPGGAAAKPFVTHHNALDMQMF-LRI 237

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E +
Sbjct: 238 APELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDFTERL 296

Query: 257 LRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
           +R    +     T+         +  F R+    AI++Y  +  D
Sbjct: 297 IRQAAVDALGTATIRYQGRELDLAKPFHRLTITQAIQKYAPNYTD 341


>gi|160875062|ref|YP_001554378.1| asparaginyl-tRNA synthetase [Shewanella baltica OS195]
 gi|189083414|sp|A9KZ30|SYN_SHEB9 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|160860584|gb|ABX49118.1| asparaginyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315267294|gb|ADT94147.1| asparaginyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 466

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 107/280 (38%), Gaps = 48/280 (17%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    GI FL + D             +CF   + V    + 
Sbjct: 12  GEHAVGSKVTVRGWVRTRRDSKAGISFLAVYD------------GSCFNPIQGVVPNSLD 59

Query: 72  CIDGLVMSRSAETINANIITGQI----------ELSAQKIEILS-VAEELPLPVFGEREY 120
             D  V+  +A    + ++TG +          EL   ++E+   V +    P+  +R  
Sbjct: 60  NYDNEVLKLTAGC--SVVMTGDVVESPGAGQAFELQVTELEVAGWVDDPDTYPMAAKRHS 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGAR 178
            E +R       LR  T     V R R  +  ++      E FI  STP++TAS  EGA 
Sbjct: 118 IEHLR---ELAHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAG 174

Query: 179 DFLVPS--------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           +    S        R + G       F+   A      Q      A    + +   P FR
Sbjct: 175 EMFRVSTLDMENLPRTDAGKVDYDKDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFR 234

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            E+  + R   EF+ ++ E++F   +DI    E +L+  F
Sbjct: 235 AENSNTSRHLAEFWMVEPEVAFANLNDIAGLAEAMLKYAF 274


>gi|126441810|ref|YP_001059617.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|166229800|sp|A3NB96|SYK_BURP6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|126221303|gb|ABN84809.1| lysine--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 508

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFVTGREIANGFSELNDPEDQAARFRKQVEQKDAGDEEAMFFDADYIRALEYGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 122/285 (42%), Gaps = 24/285 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q    P     E   + + +W L    +V +R
Sbjct: 68  VAVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPADVGAETYDAFK-KWDLG--DIVAAR 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                     T + ELS +  E+  +A+ L PLP        +  R++ R++DL      
Sbjct: 125 -----GVLFRTNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPET 179

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQ 196
           +   + RT+ I S+R  M   +F+E  TP+L    P GA  + F+          + L  
Sbjct: 180 RATFRARTKAIASIRKFMSDADFMEVETPMLH-PIPGGAAAKPFVTHHNALDMQMF-LRI 237

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E +
Sbjct: 238 APELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDFTERL 296

Query: 257 LRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
           +R    +     T+         +  F R+    AI++Y  +  D
Sbjct: 297 IRQAAVDALGTATIRYQGRELDLAKPFHRLTITQAIQKYAPNYTD 341


>gi|161503869|ref|YP_001570981.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160865216|gb|ABX21839.1| hypothetical protein SARI_01958 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 492

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 109/276 (39%), Gaps = 54/276 (19%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V + GWV   R    GI FL + D             +CF+  ++V +  +   +  V+ 
Sbjct: 46  VTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNEEVLH 93

Query: 80  RSAETINANIITGQI----------ELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
            +A    + ++TG++          E+ A K+E+    E+    P+  +R    SI +  
Sbjct: 94  LTAGC--SVVVTGKVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRH---SIEYLR 148

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   STP++TAS  EGA +     RV
Sbjct: 149 EVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF---RV 205

Query: 187 NQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +      LP+  Q                    Q      A    + +   P FR E+  
Sbjct: 206 STLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 265

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + R   EF+ L+ E++F + +D     E +L+ VF+
Sbjct: 266 TSRHLAEFWMLEPEVAFADLEDNARLAEAMLKYVFK 301



 Score = 37.4 bits (85), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 407 DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 461

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 462 LGFERLIAYVTGVQNVRDVIPFPRT 486


>gi|76811249|ref|YP_334110.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|167895042|ref|ZP_02482444.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167919677|ref|ZP_02506768.1| lysyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|254260252|ref|ZP_04951306.1| lysine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254297039|ref|ZP_04964492.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|123598607|sp|Q3JQP3|SYK_BURP1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|76580702|gb|ABA50177.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|157807694|gb|EDO84864.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|254218941|gb|EET08325.1| lysine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 508

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFVTGREIANGFSELNDPEDQAARFRKQVEQKDAGDEEAMFFDADYIRALEYGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 122/285 (42%), Gaps = 24/285 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q    P     E   + + +W L    +V +R
Sbjct: 68  VAVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPADVGAETYDAFK-KWDLG--DIVAAR 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                     T + ELS +  E+  +A+ L PLP        +  R++ R++DL      
Sbjct: 125 -----GVLFRTNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPET 179

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQ 196
           +   + RT+ I S+R  M   +F+E  TP+L    P GA  + F+          + L  
Sbjct: 180 RATFRARTKAIASIRKFMSDADFMEVETPMLH-PIPGGAAAKPFVTHHNALDMQMF-LRI 237

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E +
Sbjct: 238 APELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDFTERL 296

Query: 257 LRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
           +R    +     T+         +  F R+    AI++Y  +  D
Sbjct: 297 IRQAAVDALGTATIRYQGRELDLAKPFRRLTITQAIQKYAPNYTD 341


>gi|71892195|ref|YP_277928.1| asparaginyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|123747818|sp|Q492P3|SYN_BLOPB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|71796301|gb|AAZ41052.1| asparaginyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 470

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/330 (21%), Positives = 130/330 (39%), Gaps = 53/330 (16%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           + + GW+   R     I FLD+ D   I   Q++A      ++   + ++E +    G  
Sbjct: 20  ITIQGWIRTRRDSKAKISFLDLYDGSCINSLQIIA------YDKLHNYKNEILRLTSGCS 73

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136
           +      + +  I   +E+ A+ I+IL   E+    P+  ++   E +R +   L  R +
Sbjct: 74  VIIVGIIVKSIGIKQHVEVIAKNIKILGWIEDPSTYPITAKKHTMEYLR-EVSHLRPRTN 132

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T+      R  +  ++   +  + FI   TPI+TA   EG+      S          P 
Sbjct: 133 TIGAVARIRDTLSQAIHNFLHKQGFIWIPTPIITACDTEGSSKMFCVSTSETQKILNNPN 192

Query: 197 APQQY-----------KQLLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEFY 235
               +           K  L  SG            + +   P FR E   ++R   EF+
Sbjct: 193 EKLHHTHDTTYDFFSKKAFLTVSGQLNAEAYACALSKVYTFGPTFRAEYSNTNRHLAEFW 252

Query: 236 QLDMEMSFVEQDDIL----NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            ++ E +F+  DDI+    + ++N++R + E+ S              DD   +Y  DK 
Sbjct: 253 MIEPEAAFMTLDDIIILAESLLKNIIRILLEKRS--------------DDI--KYLVDKI 296

Query: 292 DLRNPIIMHNVTE-HFVHSEFRVFSKILSV 320
           +     I+ N +E  F H E+    K+L +
Sbjct: 297 NKNIITILENFSEIKFNHIEYTEAIKLLEI 326


>gi|325973201|ref|YP_004250265.1| lysyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|325989644|ref|YP_004249343.1| Lysyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574729|emb|CBZ40385.1| Lysyl-tRNA synthetase [Mycoplasma suis]
 gi|323651803|gb|ADX97885.1| lysyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 481

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 8/89 (8%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL-YRAFQC---GMP 534
           A +++L  +G E+A+G    +  E  L  F  +  S+E  +   GG+ Y    C   G+P
Sbjct: 393 ARRFELYMDGVELANGFSEQNDPEEQLNQFK-LQASRETSQ---GGVDYDYISCLEYGLP 448

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG+  G+DR++M LL  ++++E+  FP
Sbjct: 449 PTGGVGIGLDRLIMFLLNRQSIKEIIAFP 477



 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 3/114 (2%)

Query: 145 RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
           R++II  +R  + +  ++E  TPIL   +    A+ F       +   + L  A + + +
Sbjct: 169 RSKIIFELRNYLNSLGYLEFETPILHKIAGGAVAKPFKTFHNSLKEELF-LRIATELHLK 227

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            L+ SGF + F+I   FR+E   S   P EF  +++  ++++ +  ++  EN++
Sbjct: 228 RLIVSGFTKVFEIGKSFRNEGIDSTHNP-EFTSIEIYTTYLDMELTMDLTENII 280


>gi|292558064|gb|ADE31065.1| Asparaginyl-tRNA synthetase [Streptococcus suis GZ1]
          Length = 367

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 24/206 (11%)

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRC 154
           EL    +E++  +++ P+     +E+        R L LR          R  II +   
Sbjct: 16  ELDVTDLEVIGESQDYPIT---PKEHGTDFLMDNRHLWLRSRKQVAIQQIRNAIIYATYE 72

Query: 155 RMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL-LMASGFDRY 213
                 FI+  +PIL+ ++ E + +        Q ++  L Q+ Q Y +   MA G  R 
Sbjct: 73  FFEKNGFIKFDSPILSGNAAEDSTELFETDYFGQLAY--LSQSGQLYLEAGAMALG--RV 128

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME----NVLRGVFEEFSNG-- 267
           F   P FR E  ++ R   EF+ +D E SF+  ++ L+  E     +++GV +       
Sbjct: 129 FDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLSHEESLDLQEAYVKALIQGVIDRAPQALE 188

Query: 268 ----------NTVSNNFLRICYDDAI 283
                       ++  F R+ YDDAI
Sbjct: 189 TLERDVDALKRYIAEPFKRVAYDDAI 214



 Score = 41.2 bits (95), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ K   E  F    R +  G  PHGG   G
Sbjct: 283 LAPEGYGEIIGGSMREDNYDALVAKMDELGMDKS--EYEFYLDLRKY--GSVPHGGFGIG 338

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V  + G K++RE   FP
Sbjct: 339 IERMVTFVAGTKHIREAIPFP 359


>gi|84393011|ref|ZP_00991778.1| asparaginyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84376365|gb|EAP93246.1| asparaginyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 466

 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 105/277 (37%), Gaps = 50/277 (18%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V          
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYED 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKIVESPAKGQDFELAATDVKVVGWVEDADTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + F   S P++TAS  EGA +     
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGFFWTSAPLITASDAEGAGEMF--- 177

Query: 185 RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDED 224
           RV+      LP+  +                    Q      A    + +   P FR E+
Sbjct: 178 RVSTLDMENLPRTDEGKVDFNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
             + R   EF+ ++ E++F + DD+    E++L+ VF
Sbjct: 238 SNTSRHLAEFWMVEPEVAFADLDDVAKLAEDMLKYVF 274


>gi|13357925|ref|NP_078199.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762151|ref|YP_001752448.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920120|ref|ZP_02931531.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508768|ref|ZP_02958236.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701862|ref|ZP_02971522.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|20139951|sp|Q9PQC6|SYN_UREPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|189083485|sp|B1AJ04|SYN_UREP2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|11271289|pir||A82901 asparaginyl-tRNA synthetase UU365 [imported] - Ureaplasma
           urealyticum
 gi|6899346|gb|AAF30774.1|AE002133_7 asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827728|gb|ACA32990.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902485|gb|EDT48774.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675705|gb|EDT87610.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701165|gb|EDU19447.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 454

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/296 (20%), Positives = 114/296 (38%), Gaps = 40/296 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSA-CFEIAKSVRSEWVLCID 74
           G  +++  WV   R    I FL + D   +T  Q V   D    +E   + R    + I+
Sbjct: 18  GQKIQIKAWVRSNRDSKKIGFLVLNDGSSLTNLQAVYRVDKIDNYEEIAAARMWAAVVIE 77

Query: 75  GLV--MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           G++     + + +   ++  QI L     + L    +L L         E++R     L 
Sbjct: 78  GVIKLTPTAKQPLELEVLNAQI-LKQSDEDFLLSNNDLNL---------ETLRLNAH-LR 126

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R +  H  +  R  +  ++   M    +   + P+ T +  EGA +     + +   F+
Sbjct: 127 PRTNLFHAIMKVRATLAFAVHEFMNQNEYSWLAAPLFTGNDAEGAGETFSIQKFDNEEFF 186

Query: 193 ALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE---- 245
                     Q +    A  F   +   P FR E   ++R   EF+ ++ EM+FV+    
Sbjct: 187 GKQTHLSVTGQLQAEAYAQAFGNVYTFGPTFRAEKSHTNRHLAEFWMIEPEMAFVDLKGM 246

Query: 246 QDDILNTMENVLRGVFEEFSN-----------------GNTVSNNFLRICYDDAIR 284
           QD + + +++V++ V E+                       V + F RI Y DA++
Sbjct: 247 QDIVEDLVKHVIKAVLEKNQQELEFLAQRNDENLIKKLQKVVESKFERIEYKDAVK 302


>gi|325283162|ref|YP_004255703.1| Asparaginyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314971|gb|ADY26086.1| Asparaginyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 443

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 118/297 (39%), Gaps = 43/297 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           +G  V L+ W+      G I FL +RD  G  Q      +     FE AK +  E  L +
Sbjct: 10  IGETVTLTVWLQDKSGKGKIQFLKLRDGSGFVQGTVFKGDVSEEVFEAAKRLSQEQSLTL 69

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132
            G V  R+ E   +      +E+S + +  LS V  E P+     +E+       +R L 
Sbjct: 70  TGEV--RADERAPSG-----VEISVRDLSPLSEVVGEYPI---TPKEHGIDFLLDHRHLW 119

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMI----AENFIECSTPILTASSPEGARDFLVPSRVNQ 188
            R    H+      R+ + ++  ++     E F     P  T ++ EG  +        +
Sbjct: 120 FR----HRRPWAVMRVRDCVQSGIVEFFRQEGFTRFDAPFFTPNAAEGTTELFEIDLFGE 175

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L Q  Q + +   A  F + +   P FR E  ++ R   EF+ ++ E++     D
Sbjct: 176 DKAY-LSQTGQLHAE-AGALAFGKVYTFGPTFRAEKSKTRRHLLEFWMVEPEVAPATHQD 233

Query: 249 ILNTMEN----VLRGVFEEFSN-----GNTVSN-------NFLRICYDDA---IRRY 286
            ++  E     ++R V +E        G  VS        N+ RI Y +A   IRR+
Sbjct: 234 NMDLQERFVSFLVRRVLDECRQELELLGRDVSKLAGAAEGNYPRITYTEALDIIRRH 290


>gi|295099925|emb|CBK89014.1| Lysyl-tRNA synthetase (class II) [Eubacterium cylindroides T2-87]
          Length = 649

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR VMLL   + +REV LFP
Sbjct: 453 ALEYGMPPTGGVGLGIDRFVMLLTDQRTIREVLLFP 488


>gi|168177968|ref|ZP_02612632.1| asparaginyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670812|gb|EDT82786.1| asparaginyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 463

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 121/306 (39%), Gaps = 55/306 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V+++GWV  VR      F+++ D   +   QV+       F+    +     + ++G++ 
Sbjct: 21  VKINGWVRTVRDSKNFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTSVEVEGIIQ 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                T NA       E+ A K+ I   +     P+  +R   E +R       LR  + 
Sbjct: 81  P----TPNAK---QPFEIKATKVSIEGKSS-TDYPLQKKRHTFEYLR---TIAHLRPRSN 129

Query: 139 HKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSRVN 187
             + V R R + +       +   F+  +TPI+T S  EGA +           +P +  
Sbjct: 130 AFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDLNNIP-KTE 188

Query: 188 QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +G       F+  P       QL     A  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 EGKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHASEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNFLRI 277
            EM+F E  D L+  E++++ V              F  F +        N V+++F RI
Sbjct: 249 PEMAFAELTDYLDNAEDMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDNVVNSDFKRI 308

Query: 278 CYDDAI 283
            Y +A+
Sbjct: 309 TYTEAV 314


>gi|126699862|ref|YP_001088759.1| asparaginyl-tRNA synthetase [Clostridium difficile 630]
 gi|254975837|ref|ZP_05272309.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255093224|ref|ZP_05322702.1| asparaginyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255101388|ref|ZP_05330365.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255307262|ref|ZP_05351433.1| asparaginyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|255314966|ref|ZP_05356549.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255517641|ref|ZP_05385317.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255650751|ref|ZP_05397653.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260683837|ref|YP_003215122.1| asparaginyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260687497|ref|YP_003218631.1| asparaginyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306520662|ref|ZP_07407009.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|115251299|emb|CAJ69130.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS)
           [Clostridium difficile]
 gi|260210000|emb|CBA64029.1| asparaginyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260213514|emb|CBE05234.1| asparaginyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 465

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 119/311 (38%), Gaps = 57/311 (18%)

Query: 17  VGSFVRLSGWVH--RVRPHGGIIFLDIRDHYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
           +G  V+++GW+   RV  + G I L+    +   Q+V +     F E+ K   S  +L  
Sbjct: 19  IGKTVKVAGWIRTSRVSKNFGFIELNDGSFFKNMQIVFDEKVENFKEVGKLAISSSILVE 78

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             LV +  A+          +E+ A+ I ++    +   P+  +R   E +R     L  
Sbjct: 79  GELVSTEGAKQ--------PVEIHAKSI-VVEGESDSSYPLQKKRHTLEYLR-TIAHLRP 128

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +T       R+    ++       NF+   +PI+T S  EGA +     R+       
Sbjct: 129 RSNTFSAVFRVRSIAAYAIHKFFQERNFVYAHSPIITGSDCEGAGEMF---RITTMDLND 185

Query: 194 LPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           +P+                       Q    +MA  F   +   P FR E+  + R   E
Sbjct: 186 IPKTEDGKIDYTQDFFGKEANLTVSGQLNAEIMALSFRNVYTFGPTFRAENSYTGRHASE 245

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSN 272
           F+ ++ E+ F + +D +   E++++ V            EF N              V++
Sbjct: 246 FWMIEPEIVFADLEDNMELAEDMIKYVISYVLENAPEEMEFFNSFIDKGLLERLNKIVNS 305

Query: 273 NFLRICYDDAI 283
            F+RI Y  A+
Sbjct: 306 EFIRITYTKAV 316



 Score = 40.8 bits (94), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 41/193 (21%)

Query: 380 NIVNTEAIR------VRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQELGIINCNCF 432
            IVN+E IR      V L ++ G    +    P+++ C    +   +I ++  I NC  F
Sbjct: 301 KIVNSEFIRITYTKAVELLIESGHEFEY----PVEWGCDLQTEHERYITEQ--IYNCPVF 354

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
               + D+P           D       M + G ++++  DLL         V    EI 
Sbjct: 355 ----VTDYP----------KDIKAFYMRMNEDG-KTVRAMDLL---------VPGVGEIV 390

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+L   + +G+ +E     +       + G   H G   G +RI+M + G
Sbjct: 391 GGSQREEREDVLLDRINEMGLREE----DYWWYLELRKFGTATHSGFGLGFERIIMYMTG 446

Query: 553 AKNVREVSLFPMS 565
             N+R+V  FP +
Sbjct: 447 MSNIRDVIPFPRT 459


>gi|57641485|ref|YP_183963.1| asparagine synthetase A [Thermococcus kodakarensis KOD1]
 gi|57159809|dbj|BAD85739.1| asparaginyl-tRNA synthetase-related protein (N-truncation)
           [Thermococcus kodakarensis KOD1]
          Length = 299

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 14/124 (11%)

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +KQ  +A G ++ F ++P  R E+  SD  R   EF QLD E+S    DD++  +E ++ 
Sbjct: 79  HKQFAVAMGLEKIFVLSPNIRLEERESDDGRHAYEFTQLDFEISHASMDDVMRLVEELIV 138

Query: 259 GVFEEFSNG---------NTVSNNFLRICYDDAIRRYGTDKPDLR---NPIIMHNVTEHF 306
           G+F E               V   F R   ++ I  +G+++   R    P  + ++   F
Sbjct: 139 GLFRELRGPVWETFERELPRVKRPFKRFTLEEVIEEFGSEEKASREMGEPFWITDIPREF 198

Query: 307 VHSE 310
              E
Sbjct: 199 YDRE 202



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 7/85 (8%)

Query: 482 YDL-VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM-PPHGG 538
           YDL +  G+ E++SGG R    E + +     G+S+E     F       + GM  P  G
Sbjct: 210 YDLYLPEGYGEVSSGGEREWEYEKIQRKIREAGLSEEA----FRPYLEVAKAGMLKPSAG 265

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
              GI+R+V  ++GAK++ EV  FP
Sbjct: 266 AGIGIERLVRYIVGAKHIAEVQPFP 290


>gi|297582413|ref|YP_003698193.1| lysyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297140870|gb|ADH97627.1| lysyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 503

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 112/255 (43%), Gaps = 29/255 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEWV 70
           ++D    V L G +   R  G   F  ++D  G  Q+    D      +E+        +
Sbjct: 54  LADKDIKVTLGGRIMTKRGKGKAGFAHVQDLTGQIQIYVRKDQVGDEAYELFTKTDIGDI 113

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYR 129
           + + G++              G++ +     E+L+ +   LP    G ++  +  R++ R
Sbjct: 114 VGVSGVLFKTKV---------GELSIKVSSFEMLTKSLRPLPDKYHGLKDVEQ--RYRQR 162

Query: 130 FLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLV 182
           +LDL      RDT     V R++I+ SMR  +    ++E  TP++ A  P G  A+ F+ 
Sbjct: 163 YLDLIVNPEVRDTF----VLRSKILQSMRRYLDDHGYLEVETPMMHA-IPGGASAKPFIT 217

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  +
Sbjct: 218 HHNALDMTLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEA 275

Query: 243 FVEQDDILNTMENVL 257
           + +  D++   EN++
Sbjct: 276 YADYHDVMALTENLI 290



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + + G+PP GG+  GIDR+VMLL  + ++R+V LFP  +N
Sbjct: 455 SLEYGLPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPQMRN 494


>gi|238883346|gb|EEQ46984.1| hypothetical protein CAWG_05538 [Candida albicans WO-1]
          Length = 535

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 11/141 (7%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           I+ ++++I ++R  ++  +F+E  TPIL+   +   A  F+   +   G    L  AP+ 
Sbjct: 217 IIVKSKVIQAIRNFLLDRDFLEVQTPILSGQGTGANATPFVTKFK---GEPVHLRVAPEL 273

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL--- 257
           + + L+  GFD+ F+I   FR+E       P EF   +   ++   D+++   E++    
Sbjct: 274 WLKKLVIGGFDKVFEIGSNFRNEGIDMTHNP-EFATCEFYQAYTSLDELMKMTEDMFGYV 332

Query: 258 ---RGVFEEFSNGNTVSNNFL 275
               GV ++F  GN   + FL
Sbjct: 333 FDKLGVTDKFPTGNFPKHEFL 353



 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           RA + G+PP GG   GIDR+ ML+ GA  + +V  F
Sbjct: 491 RAMEYGLPPTGGWGCGIDRLAMLIAGANRIEDVLTF 526


>gi|167767583|ref|ZP_02439636.1| hypothetical protein CLOSS21_02102 [Clostridium sp. SS2/1]
 gi|167710875|gb|EDS21454.1| hypothetical protein CLOSS21_02102 [Clostridium sp. SS2/1]
 gi|291558461|emb|CBL37261.1| asparaginyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 461

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/304 (21%), Positives = 121/304 (39%), Gaps = 51/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GWV   R      FL I D   +   QVV + +   F+    +     + ++G V+
Sbjct: 21  VEICGWVKSNRGSKKFGFLVINDGTFFEPIQVVYDQEMGNFDTVSKLNVGTAVIVNGTVI 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELP--LPVFGEREYPESIRFKYRFLDLRRD 136
                T +A       E+ A+ +E   V  E P   P+  +R   E +R     L  R +
Sbjct: 81  V----TPDAK---QPFEIHAKSVE---VEGECPSDYPLQKKRHTLEYLR-SISHLRPRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--------- 187
           T       R++I  ++       +F+   TP++T    EGA +    + ++         
Sbjct: 130 TFQAVFRVRSQIAYAIHKFFQERDFVYVHTPLITGQDCEGAGEMFQVTTMDLNKIAEEGK 189

Query: 188 ---QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
              +  F+  P +     QL     A  F   +   P FR ED  + R   EF+ ++ E+
Sbjct: 190 VDYEQDFFKKPVSLTVSGQLAGETFAQAFRNIYTFGPTFRAEDSNTTRHAAEFWMIEPEI 249

Query: 242 SFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNFLRICYD 280
           +F + +D +   E +++ +              F +F +        + VS++F R+ Y 
Sbjct: 250 AFADLEDNMILAEQMIKYIINYVMEHAQEELQFFNKFVDKGLLERLNHVVSSDFGRVTYT 309

Query: 281 DAIR 284
           +A++
Sbjct: 310 EAVK 313


>gi|156083889|ref|XP_001609428.1| lysyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796679|gb|EDO05860.1| lysyl-tRNA synthetase [Babesia bovis]
          Length = 548

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 20/258 (7%)

Query: 21  VRLSGWVHRVRPHGGII-FLDIRDHYGITQVVAN-----PDSACF-EIAKSVRSEWVLCI 73
           VR++G + R+      + F D+R +    QV  N       S  F EI  S++   V+ I
Sbjct: 61  VRIAGRITRMASSSSKLRFYDVRSNGVRLQVFVNYEYHNASSGDFMEIHNSLKRGDVVGI 120

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G    RS          G++ +  +++ +L+    + LP     + P++ RF+ R+LD+
Sbjct: 121 VGFP-GRSKR--------GELSIFLREVRLLTPCLHM-LPDKSGLKDPDT-RFRQRYLDM 169

Query: 134 RRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +    N++  R+RI++  R       F+E  TP L       +    +    +     
Sbjct: 170 IMNEDAMNVMFTRSRIVSYTRNFFSQRGFMEVETPTLNVQCGGASARPFISHHNDLDIDL 229

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+   ++++  GF++ F+I  CFR+E       P EF   +   ++ + +D++  
Sbjct: 230 FLRVAPELPLKMIVVGGFEKVFEIGKCFRNEGIDMTHNP-EFTSCEFYWAYADYNDLIQL 288

Query: 253 MENVLRGVFEEFSNGNTV 270
            E  L  +  E   G T+
Sbjct: 289 TEEYLSSLVLELHGGYTL 306


>gi|152980207|ref|YP_001352950.1| lysyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166229808|sp|A6SXF3|SYK_JANMA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|151280284|gb|ABR88694.1| lysyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 511

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 7/172 (4%)

Query: 91  TGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTR 147
           T   EL+ +  E+  + + L PLP        +  +++ R++DL    DT  +    RT 
Sbjct: 137 TKTDELTIKVTELRLLTKSLRPLPDKFHGLADQETKYRQRYVDLIMNEDT-RRTFKARTA 195

Query: 148 IINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
            I+S+R  M   +F+E  TP+L T      A+ F+          + L  AP+ Y + L+
Sbjct: 196 AISSIRRFMAENDFMEVETPMLHTIPGGAAAKPFVTHHNALDMEMF-LRIAPELYLKRLV 254

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             GFDR F+I   FR+E   S R   EF  ++   ++ +   +++  E V+R
Sbjct: 255 VGGFDRVFEINRNFRNEGV-SIRHNPEFTMMEFYAAYTDYKWLMDFTEAVIR 305



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY 526
           + +D ++    +++L   G EIA+G    + +E     F     +K+  +     +   Y
Sbjct: 408 RASDTVAGITERFELFMVGREIANGFSELNDAEDQAARFQAQVAAKDAGDEEAMYYDADY 467

Query: 527 -RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GMPP GG   GIDR++M++  + N+R+V LFP
Sbjct: 468 IRALEYGMPPTGGCGIGIDRLMMIITDSPNIRDVLLFP 505


>gi|163846800|ref|YP_001634844.1| lysyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222524619|ref|YP_002569090.1| lysyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|189082954|sp|A9WK04|SYK_CHLAA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|163668089|gb|ABY34455.1| lysyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222448498|gb|ACM52764.1| lysyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 491

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 28/43 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A + GMPP GG+  GIDR+VM+L    N+REV LFP  +   D
Sbjct: 448 ALRYGMPPTGGLGVGIDRLVMVLTDQSNIREVILFPHLRERSD 490



 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 5/169 (2%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG+  L  +++ IL+ A   P   +   +  E  R + R+LDL  +   + I + R R+I
Sbjct: 118 TGERSLFVRELAILAKAINPPPEKWAGLQDVEE-RHRQRYLDLIVNRDRREIFRARARVI 176

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++MR  +    F+E  TP+L        AR F+        + Y L  A + Y + L+  
Sbjct: 177 STMRRVLDERGFLEVETPVLQPLYGGAAARPFITYHNALGQNLY-LRIATELYLKRLIVG 235

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           GF   ++I   FR+E       P EF  ++   ++ +   ++  +E +L
Sbjct: 236 GFPGVYEIGKNFRNEGVDRSHNP-EFTMMECYQAYADYHAMMTLVEEML 283


>gi|307611125|emb|CBX00769.1| asparagine tRNA synthetase [Legionella pneumophila 130b]
          Length = 467

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 119/298 (39%), Gaps = 45/298 (15%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACF--EIAK 63
           C D  +S +   V + GWV   R    G+ F+ + D   +   Q+VA    + +  E+ K
Sbjct: 10  CLDGEIS-IDETVTVRGWVKTRRDSKAGLSFISLHDGSCFSPIQIVATDQLSNYHKEVTK 68

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEEL-PLPVFGEREYP 121
                 ++    LV S+           GQ  E+ A+ IE++   E     P+  +R   
Sbjct: 69  LTAGCSMIATGKLVASQG---------RGQFFEIQAESIEVVGWVENPDTYPIQAKRHTL 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +   L  R +T+      R  +  ++      + F    TPI+TAS  EGA +  
Sbjct: 120 EFLR-EVAHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEGAGEMF 178

Query: 182 VPSRVNQGSFYALPQAPQQY----------KQLLMASG----------FDRYFQIAPCFR 221
              RV+      +P+  +            +  L  SG            + +   P FR
Sbjct: 179 ---RVSTLDLLNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMSKVYTFGPTFR 235

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR----GVFEEFSNGNTVSNNFL 275
            E+  + R   EF+ ++ E++F   +DI    +N+LR     V EE S+     N F+
Sbjct: 236 AENSNTSRHLAEFWMIEPEIAFANLEDICKLSQNMLRYLCKTVLEERSDDMDFFNQFV 293


>gi|238581429|ref|XP_002389606.1| hypothetical protein MPER_11243 [Moniliophthora perniciosa FA553]
 gi|215452056|gb|EEB90536.1| hypothetical protein MPER_11243 [Moniliophthora perniciosa FA553]
          Length = 358

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 27/240 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR+SGWVHR+R    I FL +RD  G  QVV +        A ++  E  + + G +   
Sbjct: 131 VRVSGWVHRLRQQKDITFLTLRDGTGFLQVVLSGRVNQTYQAVTLTLESTVELVGTLQV- 189

Query: 81  SAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                      G  EL     +++  A   E+       E+  P SI    R L LR +T
Sbjct: 190 ---VPEGKTAPGGHELIVDYWQLVGAAPGAEDAFTNRLNEKSDP-SILADLRHLVLRGET 245

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R  ++ + R      N +E +TP L  +  EG           + ++Y  P  
Sbjct: 246 SSSVFRLRAALLAAFRQAFAKLNCLEVTTPCLVQTMVEGGATLF------ELNYYGQPAL 299

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
              Y            FQ    FR E+  + R   E+   + E+ F+  D +++ +E+V+
Sbjct: 300 GDVY-----------CFQ--ESFRAENSHTRRHLAEYTHTEAEVGFITFDQLMDHIESVI 346


>gi|145608522|ref|XP_370051.2| hypothetical protein MGG_06566 [Magnaporthe oryzae 70-15]
 gi|145015992|gb|EDK00482.1| hypothetical protein MGG_06566 [Magnaporthe oryzae 70-15]
          Length = 515

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 50/211 (23%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPSRVNQGSFYALPQAPQQY- 201
           +T  +     +++  +  +   P++T+S  EGA +   ++P+   Q S   + ++ Q + 
Sbjct: 124 QTHELRVQEVQVVGPSDAKTHPPVVTSSDCEGAGEVFEVLPASDGQISTEGVQKSTQPFF 183

Query: 202 ---------KQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
                     QL    +A      + ++P FR E   + R   EFY ++ EMSFVE  D 
Sbjct: 184 DSQKYLTVSAQLHLEALAQSVGNVWTLSPTFRAEKSDTPRHLSEFYMMEAEMSFVESMDT 243

Query: 249 ILNTMENVLRGVFEEFSN----------------------------GNTVSNNFLRICYD 280
           +++ +E++LR   +E S+                               +++++ RI Y 
Sbjct: 244 VMDLVEDLLRFATKELSSTKLFEDLQHRSKEGADDLTTPEEVRSRWNGLMADSWPRITYS 303

Query: 281 DAIR---RYGTDKPDLRN--PIIMHNV-TEH 305
           DAIR       D+PD+ N  PI  H +  EH
Sbjct: 304 DAIRLLESESQDRPDMFNFKPIWGHGLQAEH 334



 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 26/113 (23%)

Query: 484 LVCNGFEIASGGIRNH---------MSEVMLQAFSNVGISK-------------EVVENR 521
           LV +  EIA G +R H          S  M+   S+VG S                 + +
Sbjct: 402 LVPDLCEIAGGSMREHRLQPLLGVMQSRGMVPQVSDVGSSSLASRGDGDSDPVSNTTDAQ 461

Query: 522 FGGLYRAF----QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             G    +    + G PPHGG   G DR++  L G +++R++  FP     CD
Sbjct: 462 HAGALDWYVDLRRWGCPPHGGFGIGFDRLLCYLSGVQSIRDIVAFPRWYGRCD 514


>gi|257439881|ref|ZP_05615636.1| aspartyl-tRNA synthetase [Faecalibacterium prausnitzii A2-165]
 gi|257197694|gb|EEU95978.1| aspartyl-tRNA synthetase [Faecalibacterium prausnitzii A2-165]
          Length = 179

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 25/168 (14%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            ++G+ V++ G++  +R    + F+ ++D  G  Q+          + K    + V  ID
Sbjct: 11  KEIGNTVKVQGFIENLRNSKYMAFIVLKDITGKLQIT---------VEKEDHPDLVGTID 61

Query: 75  GL----VMSRSAETI-NANIITGQIELSAQKIEILSVAEELPLPVFG----------ERE 119
            L    V++ + + + N  +  G IE+  + IE+ S+A+ LP+              ER 
Sbjct: 62  QLTPDSVITVTGKVVENDYVKMGGIEMIPEAIEVESIADALPIARKAIAATKKKKAVERS 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
             +  R  YR++DLR D        ++ ++N+MR  ++ +NFIE  TP
Sbjct: 122 SIDQ-RIDYRWVDLRTDENQLMFKAQSCMVNAMRKFLLDQNFIEIHTP 168


>gi|210134383|ref|YP_002300822.1| lysyl-tRNA synthetase [Helicobacter pylori P12]
 gi|226710888|sp|B6JPT1|SYK_HELP2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|210132351|gb|ACJ07342.1| lysyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 501

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ + D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKVEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFEMEGFLEVETPMMHPI-PGGANARPFITYHNALEVERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|39940548|ref|XP_359811.1| hypothetical protein MGG_04966 [Magnaporthe oryzae 70-15]
 gi|145010799|gb|EDJ95455.1| hypothetical protein MGG_04966 [Magnaporthe oryzae 70-15]
          Length = 615

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 74/145 (51%), Gaps = 4/145 (2%)

Query: 125 RFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           RF+ R+LD   +   + ++ +R+RI+  +R       FIE  TP++T+ +  GA      
Sbjct: 243 RFRMRYLDFMFNDKSREVLWQRSRIVKYIRDFFHDRRFIEVETPMMTSIAG-GATALPFV 301

Query: 184 SRVNQGSFYALPQ-APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           +  N+       + AP+ Y ++L+  G+++ F+I   FR+E       P EF  ++   +
Sbjct: 302 THHNEYDLDMFMRIAPELYLKMLVVGGYNKVFEIGKNFRNEGCDLTHNP-EFTTIEAYAA 360

Query: 243 FVEQDDILNTMENVLRGVFEEFSNG 267
           + +  D+++  E ++ G+ +  + G
Sbjct: 361 YYDMYDVMDYTEELVSGLVKHLTGG 385


>gi|317498655|ref|ZP_07956948.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894142|gb|EFV16331.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 461

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/304 (21%), Positives = 121/304 (39%), Gaps = 51/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GWV   R      FL I D   +   QVV + +   F+    +     + ++G V+
Sbjct: 21  VEICGWVKSNRGSKKFGFLVINDGTFFEPIQVVYDQEMGNFDTVSKLNVGTAVIVNGTVI 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELP--LPVFGEREYPESIRFKYRFLDLRRD 136
                T +A       E+ A+ +E   V  E P   P+  +R   E +R     L  R +
Sbjct: 81  V----TPDAK---QPFEIHAKSVE---VEGECPSDYPLQKKRHTLEYLR-SISHLRPRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--------- 187
           T       R++I  ++       +F+   TP++T    EGA +    + ++         
Sbjct: 130 TFQAVFRVRSQIAYAIHKFFQERDFVYVHTPLITGQDCEGAGEMFQVTTMDLNKIAEEGK 189

Query: 188 ---QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
              +  F+  P +     QL     A  F   +   P FR ED  + R   EF+ ++ E+
Sbjct: 190 VDYEQDFFKKPVSLTVSGQLAGETFAQAFRNIYTFGPTFRAEDSNTTRHAAEFWMIEPEI 249

Query: 242 SFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNFLRICYD 280
           +F + +D +   E +++ +              F +F +        + VS++F R+ Y 
Sbjct: 250 AFADLEDNMILAEQMIKYIINYVMEHAQEELQFFNKFVDKGLLERLNHVVSSDFGRVTYT 309

Query: 281 DAIR 284
           +A++
Sbjct: 310 EAVK 313


>gi|218709797|ref|YP_002417418.1| asparaginyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|218322816|emb|CAV18993.1| Asparaginyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 466

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 105/277 (37%), Gaps = 50/277 (18%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V          
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYED 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKIVESPAKGQDFELAATDVKVVGWVEDADTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + F   S P++TAS  EGA +     
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGFFWTSAPLITASDAEGAGEMF--- 177

Query: 185 RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDED 224
           RV+      LP+  +                    Q      A    + +   P FR E+
Sbjct: 178 RVSTLDMENLPRTDEGKVDFNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
             + R   EF+ ++ E++F + DD+    E++L+ VF
Sbjct: 238 SNTSRHLAEFWMVEPEVAFADLDDVAKLAEDMLKYVF 274


>gi|148378598|ref|YP_001253139.1| asparaginyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           3502]
 gi|153932838|ref|YP_001382985.1| asparaginyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           19397]
 gi|153935177|ref|YP_001386531.1| asparaginyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|166231659|sp|A7FRK8|SYN_CLOB1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166231660|sp|A5HZE1|SYN_CLOBH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148288082|emb|CAL82150.1| asparaginyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           3502]
 gi|152928882|gb|ABS34382.1| asparaginyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           19397]
 gi|152931091|gb|ABS36590.1| asparagine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 463

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 121/306 (39%), Gaps = 55/306 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V+++GWV  VR      F+++ D   +   QV+       F+    +     + ++G+V 
Sbjct: 21  VKINGWVRTVRDSKNFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTSVEVEGIVQ 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                T NA       E+ A +I I   +     P+  +R   E +R       LR  + 
Sbjct: 81  P----TPNAK---QPFEIKATRISIEGKSS-TDYPLQKKRHTFEYLR---TIAHLRPRSN 129

Query: 139 HKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSRVN 187
             + V R R + +       +   F+  +TPI+T S  EGA +           +P +  
Sbjct: 130 AFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDLNNIP-KTE 188

Query: 188 QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +G       F+  P       QL     A  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 EGKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHASEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNFLRI 277
            EM+F E  D L+  E++++ V              F  F +        N V+++F RI
Sbjct: 249 PEMAFAELTDYLDNAEDMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDNVVNSDFKRI 308

Query: 278 CYDDAI 283
            Y +A+
Sbjct: 309 TYTEAV 314


>gi|327354398|gb|EGE83255.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 582

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 14/185 (7%)

Query: 91  TGQIELSAQKIE----ILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-R 145
           TG+ ELS    E    I     ++PL +  +   P      +R + L       +I++ R
Sbjct: 194 TGRGELSVTASELPKLITPCLHDIPLRIKEQESSP-----YHRHVQLLSSPTAADILRAR 248

Query: 146 TRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQ 203
           + II  +R   + ++F+E  TPIL AS   GA  R F   +        +L  AP+ + +
Sbjct: 249 SSIIQYIRTFFLDKSFMEVETPIL-ASVAGGAVARPFETSATEFPDRPLSLRIAPELWLK 307

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            L+  GFD+ F+I   FR+E       P EF   +   +F + + +++  E++  G+ + 
Sbjct: 308 RLVVGGFDKVFEIGQSFRNEGLDKTHNP-EFTTCEFYHAFADLETLISLTESIFTGLSQH 366

Query: 264 FSNGN 268
             N N
Sbjct: 367 VHNLN 371



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +A Q G+PP GG   G+DR+VML  GA  + +V  F
Sbjct: 537 QALQWGLPPTGGWGCGVDRLVMLFTGAGRIGDVLSF 572


>gi|301061193|ref|ZP_07201982.1| lysine--tRNA ligase-like protein GenX [delta proteobacterium
           NaphS2]
 gi|300444735|gb|EFK08711.1| lysine--tRNA ligase-like protein GenX [delta proteobacterium
           NaphS2]
          Length = 317

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 8/130 (6%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           ++ R +I+ S+R   I  +++E  TP ++TA +PE   +      ++ G  Y L  +P+ 
Sbjct: 24  LLSRAKIVQSIREFFITRDYLEVETPQLITAPAPEAHIE-----SISVGDRY-LQTSPEL 77

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
             + L+  GF R FQI+ CFR E+     LP EF  L+   + ++  D++   EN+   +
Sbjct: 78  CMKRLLTRGFPRIFQISRCFRGEERGDLHLP-EFSLLEWYRTRIDYRDLMVECENLFLFL 136

Query: 261 FEEFSNGNTV 270
             + + G  +
Sbjct: 137 ARQLNLGTVL 146


>gi|68061405|ref|XP_672702.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56489988|emb|CAI01907.1| hypothetical protein PB300444.00.0 [Plasmodium berghei]
          Length = 426

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 92/181 (50%), Gaps = 10/181 (5%)

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR--FLDLRRDTLHK-NIVKRT 146
           + G++ L  + I IL+ A  LPLP   + +  + I +KYR  +LD   ++  K  I+ R 
Sbjct: 109 LRGELTLHTKNIYILTKAL-LPLP--DKHKGMKDIEYKYRKRYLDFLTNSEQKEKIITRF 165

Query: 147 RIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
            II  +R  ++ + ++E  TP+L   +    A+ F    +      Y L  AP+ + + L
Sbjct: 166 NIIQEIRRFLLKKKYLEVDTPMLQLVAGGASAKPFETHLKSLDLVLY-LRIAPELFLKKL 224

Query: 206 MASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           + SG  ++ F+++ CFR+E   +   P EF  L++  S+     ++   + +++ V ++ 
Sbjct: 225 IISGISEKIFELSKCFRNEGLSTIHNP-EFTMLEIYKSYANYKYMMKFTKKLIKNVAKKI 283

Query: 265 S 265
           S
Sbjct: 284 S 284


>gi|325579193|ref|ZP_08149149.1| lysine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159428|gb|EGC71562.1| lysine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 333

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 8/109 (7%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDL----VCNGF-EIASGGIRNHMSEVMLQAFSNVGI 513
           F   Q  +  L   D    + F++      + NGF E+     + H  E   +  +  G+
Sbjct: 223 FPSSQAALAQLSPEDSRVAERFEFYYKGLELANGFHELTDAREQQHRFEQDNRLRARAGL 282

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +  +++RF     A Q G+P   G+A G+DR++M+ LGAK+++EV  F
Sbjct: 283 PQREIDHRFLA---ALQAGIPNTSGVALGVDRLIMIALGAKSIKEVISF 328



 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 14/132 (10%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD---------FLVPSRVNQGS 190
           KN++ R +II  +R        +E  TP+L   S  G  D         F+ P      +
Sbjct: 24  KNLLARAKIIADIRQFFTERGLLEVETPVL---SEFGVTDLHLSTFNTEFVAPFDELSKT 80

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L  +P+ + + L+A+G    FQI   FR+E+   +R   EF  L+      +   ++
Sbjct: 81  LW-LSTSPEYHMKRLLAAGSGPIFQIGKVFRNEEA-GNRHNPEFTMLEWYRPHFDMYRLM 138

Query: 251 NTMENVLRGVFE 262
           N ++++L+ + +
Sbjct: 139 NEVDDLLQQILD 150


>gi|322436022|ref|YP_004218234.1| lysyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321163749|gb|ADW69454.1| lysyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 624

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA Q G+PP GG   GIDR+ M+L G +++R+V LFP+
Sbjct: 568 RALQYGLPPTGGEGIGIDRLTMILTGQRSIRDVILFPL 605



 Score = 44.7 bits (104), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 3/119 (2%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           VKR  I+ ++R    +  ++E  TP++ + +    AR F           Y L  AP+ Y
Sbjct: 244 VKRALILRALRTFFDSRGYLEVETPMMHSIAGGAAARPFTTRHNALDMELY-LRIAPELY 302

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            + L+  G DR ++I   FR+E   +   P EF  L+   ++    D+++  E +++ V
Sbjct: 303 LKRLVVGGMDRVYEINRNFRNEGVSTKHNP-EFTMLEFYQAYANYHDLMDLTEELIKFV 360


>gi|262275965|ref|ZP_06053774.1| asparaginyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262219773|gb|EEY71089.1| asparaginyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 469

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 109/279 (39%), Gaps = 44/279 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV------ 65
           G + V + V + GW+   R    GI FL I D             +CF+  ++V      
Sbjct: 15  GKAAVDTEVTVRGWIRTRRDSKAGISFLAIYD------------GSCFDPIQAVVPNELN 62

Query: 66  --RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPE 122
             + E +    G  +  + + + +       EL A  ++++   E+    P+   R    
Sbjct: 63  NYQEEVLRLTTGCSVEVTGKVVESPGQGQAYELQATDVKVVGWVEDAETYPMAKTRH--- 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDF 180
           SI +      LR  T     V R R  +     R   EN +   S P++TAS  EGA + 
Sbjct: 120 SIEYLREVAHLRPRTNVIGAVARVRNCLAQAIHRFYHENGYYWVSAPLITASDAEGAGEM 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDE 223
              S ++  +     +    Y +        L  SG            + +   P FR E
Sbjct: 180 FRVSTLDMENLPRTEKGDVDYSEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAE 239

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           +  + R   EF+ ++ E++F E DD+    E++L+ VF+
Sbjct: 240 NSNTSRHLAEFWMVEPEVAFAELDDVAKLAEDMLKYVFK 278


>gi|254565879|ref|XP_002490050.1| Mitochondrial asparaginyl-tRNA synthetase [Pichia pastoris GS115]
 gi|238029846|emb|CAY67769.1| Mitochondrial asparaginyl-tRNA synthetase [Pichia pastoris GS115]
 gi|328350454|emb|CCA36854.1| asparaginyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 478

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 38/248 (15%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQV--VANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           ++GWV  VR    I F+DI D      +  V  PD A     K +R+       G+ +  
Sbjct: 40  VNGWVKGVRVQKRIAFIDISDGTSFQNLMCVVPPDQA-----KELRT-------GVSVQV 87

Query: 81  SAETINANIITGQIELSA---QKIEILS-VAEELPL-PVFGEREYPESI---RFKYRFLD 132
           + E   +N  +  IEL       +++L  V +  PL   F   ++  +I   R+K +FL 
Sbjct: 88  TGEIKESNGKSQSIELKTTDPDSVKVLGPVLDSYPLQKKFHSPQFLRTIPHLRWKTQFLS 147

Query: 133 LRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---VPSRVN- 187
                   +I++ R+ +   +      E F     P++T+S  EGA +       SR + 
Sbjct: 148 --------SILRFRSHVEMKLMEFFTQEQFTRTHPPLITSSDCEGAGELFKIESASRADI 199

Query: 188 QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           +  F+          QL   ++     R + + PCFR E+  + R   EF+ L+ E++F+
Sbjct: 200 ENKFFGKDSYLTVSTQLHLEVLCMALSRVWTLTPCFRAEESDTHRHLSEFWMLEAEIAFI 259

Query: 245 EQDDILNT 252
                L T
Sbjct: 260 SDVRQLTT 267


>gi|254459446|ref|ZP_05072865.1| lysyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207083856|gb|EDZ61149.1| lysyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 505

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 11/246 (4%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           +SG +  +R  G   FL I D  G  Q+    D+        +  + +   D +      
Sbjct: 61  VSGRIKLLRIMGKASFLQIEDESGTLQIYLARDNLPEGFYNDIFKKLIEVGDII------ 114

Query: 83  ETINANIITGQIELS--AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LH 139
           E      +TGQ ELS  A   ++L+ A   PLP        + IR++ R+LDL  +  + 
Sbjct: 115 EVGGYPFVTGQGELSLHADDFKLLTKAIS-PLPEKFHGVTDKEIRYRKRYLDLIMNADVR 173

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           K    R+++I+  R     + F+E  TP++   +        V      G    L  AP+
Sbjct: 174 KTFKTRSKVISLTRRFFEDKGFLEVETPMMHPIAGGANAKPFVTHHNALGIDRFLRIAPE 233

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E   +   P EF  ++   ++    D++   +     
Sbjct: 234 LYLKRLIVGGFEAVFEINRNFRNEGMDATHNP-EFTSIEFYWAYKTYKDLIRITKEYFEY 292

Query: 260 VFEEFS 265
           +F+  +
Sbjct: 293 LFDHLN 298



 Score = 41.2 bits (95), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 4/56 (7%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
           A   GM P  G   GIDR+VMLL    ++R+V LFP  +     +     TV VE+
Sbjct: 454 ALSYGMAPTAGQGIGIDRLVMLLTNEHSIRDVLLFPAMKP----IHNEEKTVEVEE 505


>gi|148654264|ref|YP_001274469.1| lysyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|172048100|sp|A5UPG6|SYK_ROSS1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|148566374|gb|ABQ88519.1| lysyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 489

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 4/148 (2%)

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182
           R + R+LDL  +   +++ + R +I+++MR  +    F+E  TP L        AR F+ 
Sbjct: 151 RHRQRYLDLIVNPEVRDVFRTRAKIVSTMRRFLDERGFLEVETPTLQPIYGGASARPFIT 210

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                +   Y L  A + Y + L+  GF+R ++I+  FR+E       P EF  ++   +
Sbjct: 211 HHNQLKQDLY-LRIAVELYLKRLIVGGFERVYEISKVFRNEGVDRTHNP-EFTMMECYQA 268

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTV 270
           + + +D++  +E++ R +  E +   T+
Sbjct: 269 YADYNDMMRLVEDLYRTLALEVAGSTTI 296



 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP GG+  GIDR VML     ++REV LFP
Sbjct: 448 ALMYGMPPTGGLGIGIDRTVMLFTDQPSIREVILFP 483


>gi|108562604|ref|YP_626920.1| lysyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123373851|sp|Q1CUX6|SYK_HELPH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|107836377|gb|ABF84246.1| lysyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 501

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ + D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKVEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFEMEGFLEVETPMMHPI-PGGANARPFITYHNALEVERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280


>gi|329962609|ref|ZP_08300557.1| asparagine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328529640|gb|EGF56538.1| asparagine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 467

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 111/277 (40%), Gaps = 36/277 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L   D G+ V + GWV   R    + F+ + D   I  V    D   F  E+ 
Sbjct: 6   RTKIVDLLKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQVVVDLGNFDEEML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREY 120
           K + +   L ++G+        +  ++ +GQ  E+ A++IE+L   +   PL   G    
Sbjct: 66  KDITTGACLSVNGI--------LTESVGSGQKAEVQAREIEVLGTCDNTYPLQKKGH--- 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGA- 177
             S+ F      LR  T     V R R   ++       +  F    TPI+T S  EGA 
Sbjct: 115 --SMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHDRGFFYFHTPIITGSDCEGAG 172

Query: 178 RDFLVPSR-------------VNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221
           + F V ++             +    F+    +     QL   L A+     +   P FR
Sbjct: 173 QMFQVTTKNLYDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            E+  + R   EF+ ++ E++F +  D ++  E+ ++
Sbjct: 233 AENSNTPRHLAEFWMVEPEVAFNDITDNMDLAEDFIK 269


>gi|269961689|ref|ZP_06176050.1| asparaginyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269833554|gb|EEZ87652.1| asparaginyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 472

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 109/275 (39%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D             +CF+  ++V    +   D 
Sbjct: 22  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYDN 69

Query: 76  LVMSRSAE-------TINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
            V+  +          I A+   GQ  EL+A  ++++   E+    P+   R    SI +
Sbjct: 70  EVLKLTTGCSVEVTGKIVASPAKGQDFELAATDVKVVGWVEDADTYPMAKTRH---SIEY 126

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 127 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 186

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     +    Y +        L  SG            + +   P FR E+  +
Sbjct: 187 TLDMENLPRTEEGKVDYNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNT 246

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F E DD+    E++L+ VF+
Sbjct: 247 SRHLAEFWMVEPEVAFAELDDVAKLAEDMLKFVFK 281


>gi|195978451|ref|YP_002123695.1| lysyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975156|gb|ACG62682.1| Lysyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 501

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 19/242 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G +   R  G + F  ++D  G  Q+    DS     ++I K       + ++G +M 
Sbjct: 69  IAGRLMTKRGKGKVGFAHLQDRQGQIQIYVRKDSVGDENYDIFKKADLGDFIGVEGDIMR 128

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRD 136
                       G++ + A K+  LS +   PLP  F      E+I ++ R LDL   R 
Sbjct: 129 TD---------MGELSIKATKLTHLSKSLR-PLPEKFHGLTDIETI-YRKRHLDLISNRS 177

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  +  V R+++I+ +R  +    F+E  TP+L   +   A    +     Q     L  
Sbjct: 178 SFER-FVTRSKMISEIRRYLDGLGFLEVETPVLHNEAGGAAARPFITHHNAQDIDMVLRI 236

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  D++N  E +
Sbjct: 237 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYEAYADYLDMMNLTEGI 295

Query: 257 LR 258
           ++
Sbjct: 296 IQ 297



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 435 LSRFKAQAAAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVL 494

Query: 561 LFP 563
           LFP
Sbjct: 495 LFP 497


>gi|70954415|ref|XP_746255.1| lysine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56526803|emb|CAH78087.1| lysine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 516

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 18/214 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +S  G  +R+S    ++R      F D+       QV+AN     F      +S +V C 
Sbjct: 66  LSVTGRIMRISSSGQKLR------FFDLVGDGKRIQVLAN-----FSFHDKEKSNFVECY 114

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP-LPV-FGEREYPESIRFKYRFL 131
           D +        I     + + ELS    E + ++  L  LP+ +G ++    IR++ R+L
Sbjct: 115 DKIRRGDIVGIIGFPGKSKKGELSIFPRETILLSPCLHMLPMKYGLKD--TEIRYRQRYL 172

Query: 132 DLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQG 189
           DL  +   +NI + RT+IIN +R  +  + FIE  TP +   +    AR F+        
Sbjct: 173 DLIVNESTRNIFITRTKIINFLRSFLNDQGFIEVETPSMNLVAGGASARPFITHHNDLDI 232

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             Y L  A +   ++L+  G DR ++I   FR+E
Sbjct: 233 DLY-LRIATELPLKMLIVGGLDRVYEIGKVFRNE 265



 Score = 40.4 bits (93), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A +  +PP GG+  GIDRI M L     +++V LFP
Sbjct: 475 ALEYALPPTGGLGLGIDRITMFLTNKNCIKDVILFP 510


>gi|53719891|ref|YP_108877.1| lysyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|81379446|sp|Q63SN9|SYK_BURPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|52210305|emb|CAH36284.1| lysyl-tRNA synthetase [Burkholderia pseudomallei K96243]
          Length = 508

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     F   Y RA + GMPP 
Sbjct: 416 RFELFVTGREIANGFSELNDPEDQAARFRKQVEQKDAGDEEAMFFDADYIRALEYGMPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 GGCGIGIDRLVMLLTDSPTIRDVLLFP 502



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 122/285 (42%), Gaps = 24/285 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q    P     E   + + +W L    +V +R
Sbjct: 68  VAVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPADVGAETYDAFK-KWDLG--DIVAAR 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                     T + ELS +  E+  +A+ L PLP        +  R++ R++DL      
Sbjct: 125 -----GVLFRTNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPET 179

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQ 196
           +   + RT+ I S+R  M   +F+E  TP+L    P GA  + F+          + L  
Sbjct: 180 RATFRARTKAIASIRKFMSDADFMEVETPMLH-PIPGGAAAKPFVTHHNALDMQMF-LRI 237

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E +
Sbjct: 238 APELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDFTERL 296

Query: 257 LRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
           +R    +     T+         +  F R+    AI++Y  +  D
Sbjct: 297 IRQAAVDALGTATIRYQGRELDLAKPFHRLTITQAIQKYAPNYTD 341


>gi|309359933|emb|CAP32090.2| CBR-NARS-2 protein [Caenorhabditis briggsae AF16]
          Length = 426

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 120/307 (39%), Gaps = 71/307 (23%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           S  RL GW   V+  G  +F+ + D     + Q+VA+      EIA  V+    +     
Sbjct: 13  STKRLDGWAKSVQKSGKSVFVKVDDGRTNSLIQLVASK-----EIANKVKVGSAI----- 62

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
              R+  ++  ++ + Q        E   VA EL   V G+ E         R+ DL  D
Sbjct: 63  ---RAVGSLEKSLGSQQ--------ETEFVASELR--VVGQDE-------NARYDDLSAD 102

Query: 137 TLHKNIVKRTRIINS---MRCR----------MIAENFIECSTPILTASSPEGAR---DF 180
            L K    R R +     +R R           ++ +FI   TP LT +  EG     D 
Sbjct: 103 NLRKKTHLRARNVQFAAFLRLRSTIFRETHEFFMSRDFIHIDTPKLTRNDCEGGGEVFDV 162

Query: 181 LVPSRVNQGSFYALPQAP------QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           +  S         + + P       Q     + S   R + + P FR E  +S     EF
Sbjct: 163 VTTSSEALNGSEGVKEDPIYLSVSSQLHLEALVSRLQRVYTLGPAFRAEKQQSHAHLSEF 222

Query: 235 YQLDMEMSFVEQ-DDILNTMENVLRGVF----------------EEFSNGNTVSNNFLRI 277
           + L+ E++FVE  D++   +E+ ++ +F                 E ++    ++ F RI
Sbjct: 223 HMLEAEVAFVETIDEMCELVESYVQHMFSLLDSPKFQTELKIVGSEPTSPVPTNSKFSRI 282

Query: 278 CYDDAIR 284
            YDDA++
Sbjct: 283 TYDDAVK 289


>gi|317179988|dbj|BAJ57774.1| lysyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 501

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESTILQAYISQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFEMEGFLEVETPMMHPI-PGGANARPFITYHNALEIERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280


>gi|256078425|ref|XP_002575496.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238660736|emb|CAZ31729.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 512

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 115/285 (40%), Gaps = 23/285 (8%)

Query: 25  GWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAE 83
           GWVHR+R     ++F+ +RD  G  Q V + +    + A ++  E  + + G+V     +
Sbjct: 128 GWVHRIRRQSKTLMFIILRDGTGFLQCVFSNNLCLTQDAITLSPESTVEVYGVV----KQ 183

Query: 84  TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV 143
             +     G IEL A    I+  A    +      E     +   R L +R +   K + 
Sbjct: 184 LPSGKSAPGGIELVADGWAIIGKAPAGGIDSVLTVESDIDTQLDNRHLVIRGENTAKVLR 243

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
             +  + + R   +   ++E   P    +  EG+      +   + +F  + Q+ Q Y +
Sbjct: 244 LVSVALEAFRAHFVDRGYVEVLPPTFVQTQVEGSATLFSLNYFGETAF--MSQSSQLYLE 301

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
             + +  D  F I   +R E  R+ R   E+  ++ E  F++ + +L  +E+++  V + 
Sbjct: 302 TCIPAVGD-CFCITRSYRAEKSRTRRHLSEYNHVEAECPFIDLNGLLERIEDLVVDVCDR 360

Query: 264 FSNGN------------TVSNNFLRICYDDAI---RRYGTDKPDL 293
               +            T    F R+ Y+DAI      G  K DL
Sbjct: 361 IMKRSGDLLLDVNPQFKTPKRPFKRLKYEDAIVCLNNLGITKEDL 405


>gi|116332661|ref|YP_802378.1| tRNA synthetase class II (D, K and N) [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|116127528|gb|ABJ77620.1| tRNA synthetase class II (D, K and N) [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
          Length = 315

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 10/170 (5%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD-FLV--PSRVNQGSFYALPQA 197
           ++KR + ++ +R     +N++E  TP L A  S E   D FLV  PSR  +G    L  +
Sbjct: 9   LIKRAQFLSVLRKFFEKKNYLEMDTPCLKAVPSMEPYLDPFLVRSPSRKEKG---YLITS 65

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+   + +++ G ++ ++I   FR  +  S     EF  L+     +  +D++N    +L
Sbjct: 66  PEYSLKEILSKGLEKIYEITHTFRSGEEGSPFHSAEFLMLEFYTVGISLEDLMNFCTELL 125

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRY---GTDKPDLRNPIIMHNVTE 304
             +  EF       N   +I  ++++R+Y   G  K +L   I+   ++E
Sbjct: 126 EVLDCEFQAFGFDRNKVRKISVEESLRKYAHCGISKSELDRVILERRLSE 175



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 27/37 (72%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           GL RA + G+P   GI+ G+DR+++ +LG  ++RE+S
Sbjct: 273 GLERALREGIPDSCGISIGLDRLLLCILGGSSLREIS 309


>gi|327308538|ref|XP_003238960.1| asparaginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326459216|gb|EGD84669.1| asparaginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 550

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 23/208 (11%)

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR------I 148
           EL A K++I+  A+    P+  +   P+ +R   +   LR  T    ++ R R      +
Sbjct: 133 ELQATKVDIVGEADPATYPIQKKFHTPDFLR---QLPHLRLRTPFNALLSRLRSEFIYQV 189

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVPSRVNQGSFYALPQAPQQ 200
               R      NF++   P++T+S  EGA        RDF V        F+  P+    
Sbjct: 190 TEEFRSHRHL-NFVQVQPPLITSSDCEGAGEVFSIKPRDF-VTEEGKAIEFFKSPKYLTV 247

Query: 201 YKQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT-MENV 256
             QL +   A+     + ++P FR E   + R   EFY L++EMS+++  + L   +E +
Sbjct: 248 SSQLHLEAYAAELGNVWTLSPTFRAEKSDTPRHLSEFYMLEVEMSYMDSLEPLTAFVETL 307

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           LR   +   N       F     DD  +
Sbjct: 308 LRNTTQRVYNSPVARELFSFKVADDLTK 335


>gi|312883614|ref|ZP_07743339.1| asparaginyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368837|gb|EFP96364.1| asparaginyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 466

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 126/322 (39%), Gaps = 67/322 (20%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV------ 65
           G  +V S V + GW+   R    GI FL I D             +CF+  ++V      
Sbjct: 12  GRLEVDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLN 59

Query: 66  --RSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYP 121
              SE +    G  +  +  T+ A+   GQ  EL+A  ++++   E+    P+   R   
Sbjct: 60  NYESEVLKLTTGCSVEVTG-TVVASPAKGQDFELTATDVKVVGWVEDAETYPMAKTRH-- 116

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARD 179
            SI +      LR  T     V R R  +  ++      + +   S P++TAS  EGA +
Sbjct: 117 -SIEYLREVAHLRPRTNVIGAVSRVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGE 175

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRD 222
               S ++  +          Y +        L  SG            + +   P FR 
Sbjct: 176 MFRVSTLDMENLPRTESGNVDYNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRA 235

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF-----------EEFSN----- 266
           E+  + R   EF+ ++ E++F + +DI    E++L+ VF           E F+      
Sbjct: 236 ENSNTSRHLAEFWMVEPEVAFADLNDIAKLSEDMLKYVFKAVLAECRDDLEFFAQRIDKE 295

Query: 267 -----GNTVSNNFLRICYDDAI 283
                 N VS++F ++ Y DAI
Sbjct: 296 AITRLENFVSSDFAQVDYTDAI 317


>gi|71893765|ref|YP_279211.1| asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|123734333|sp|Q4A9S1|SYN_MYCHJ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|71851892|gb|AAZ44500.1| asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 449

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 18/272 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GW+  +R +  IIF+++ D   +   Q V   +   F+  +++     + I G+  
Sbjct: 20  VLIQGWITNIRGNLKIIFVELNDGSSFKNLQCVLKKEFIDFDKIENLALGVAVEISGIFS 79

Query: 79  SRSAETINANIITGQIELSAQK--IEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +         ++   +E+             +E+ L V   R+ P    F++R       
Sbjct: 80  NTPERQQFGEVLVETLEIKGNNYNTNFPIQNQEISLEVL--RQMP---HFRHR------S 128

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
            L + I+K R+ +   +      + FI  S PILT++  EGA +  +    N+  F    
Sbjct: 129 RLFRVIMKLRSALFFEIHKFFRRQGFINFSAPILTSNDGEGAGEVFIVDDENKDFFNKKT 188

Query: 196 Q--APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                 Q      A GF + +  AP FR E   + R   EF+ ++ E++F   + I+   
Sbjct: 189 TLGVTGQLHAEAYALGFKKVYTFAPTFRAERSNTRRHAAEFWMIEPEVAFFTLEQIIELA 248

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             +L+ V +     N     FL    D  +R+
Sbjct: 249 VKLLQKVIKSVIIRNKDEFIFLEKAGDKNLRK 280


>gi|315180018|gb|ADT86932.1| asparaginyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 466

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 106/275 (38%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V          
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYND 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKVVESPASGQAFELAATDVKVVGWVEDADTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y +        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMENLPRTDAGKVDYNEDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F E DD+    E++L+ VF+
Sbjct: 241 SRHLAEFWMVEPEVAFAELDDVAKLAEDMLKYVFK 275


>gi|294506912|ref|YP_003570970.1| Lysyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294343240|emb|CBH24018.1| Lysyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 514

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G+  GIDR+ M+L G +++R+V LFP+
Sbjct: 472 RALEYGMPPAAGLGVGIDRLTMILTGQESIRDVILFPL 509



 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 115/271 (42%), Gaps = 26/271 (9%)

Query: 16  DVGSF-VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----- 69
           +VG + V ++G +  +R  GG  F D+RD  G  QV         +    V +E      
Sbjct: 58  EVGGYKVSVAGRITGLRVMGGSAFFDLRDETGTIQVYVRSQDLGDDFYDEVFTELFDIGD 117

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY-------PE 122
           ++ ++G V       +           +A + ++L+ A   PLPV  E E         +
Sbjct: 118 IVGVEGFVFRTGMGEVTVR--------AADEFQLLAKALR-PLPVVKETEEETYYEVTDK 168

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDF 180
             R++ R++DL  +   + + + R+ +I++MR  +  +  +E  TP+L        A  F
Sbjct: 169 EFRYRQRYVDLAVNEDVRGVFRQRSELISTMRRFLDEQGCLEVETPVLQPVYGGASAAPF 228

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                      Y L  A + Y + L+  GF+  ++I   FR+E       P EF  ++  
Sbjct: 229 ETHHNALDMPLY-LRIADELYLKRLLVGGFEGVYEIGKDFRNEGLSRFHNP-EFTMMECY 286

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           +++ +   +++  E+ LR       +  TV+
Sbjct: 287 VAYKDYRWMMDLTEDFLRTAATALHDTPTVA 317


>gi|184201797|ref|YP_001856004.1| lysyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183582027|dbj|BAG30498.1| putative lysyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 1099

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 111/260 (42%), Gaps = 24/260 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           + V   V L G V  +R  GG++F  I +H    QV+   DSA   ++  + S W   +D
Sbjct: 651 ATVAEPVSLGGRVRELRDFGGVVFAVIEEHDVRLQVILE-DSA---VSPELLSLWRRAVD 706

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGER---EYPESIRFKYR 129
                   + I+A    G+       +   S  +A +   PV  +      PE+ R + R
Sbjct: 707 ------VGDHISATGTLGRSRRGEPSLLATSWAMASKSLRPVPSDHTGFTNPEA-RVRQR 759

Query: 130 FLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +     +++ R+R I +MR   +   ++E  TP+L A      AR F       
Sbjct: 760 YLDLIVNKDSARLLRARSRGIAAMRQSFMERGYMEVETPMLQAVHGGASARPFRTHINAY 819

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L   G D+ F++   FR+E   +   P EF  ++   ++    
Sbjct: 820 NADLY-LRIAPELYLKHLCVGGMDKIFELNRNFRNEGADATHNP-EFTSVE---AYAAHG 874

Query: 248 DILNTMENVLRGVFEEFSNG 267
           D  NTM  + R +  E +  
Sbjct: 875 D-YNTMRVLTRDLIIEVATA 893



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 13/94 (13%)

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G EI +           RN ++E   +A +    + EV EN       A +  
Sbjct: 1006 RWDLVAFGAEIGTAYSELVDPVDQRNRLTEQSYKAAAGDPEAMEVDEN----FLTALEYA 1061

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            MPP GG+  G+DR++M+L G  N+R    FP ++
Sbjct: 1062 MPPTGGLGIGVDRMIMMLTG-TNIRATLAFPFTR 1094


>gi|325989609|ref|YP_004249308.1| asparaginyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574694|emb|CBZ40350.1| Asparaginyl-tRNA synthetase [Mycoplasma suis]
          Length = 439

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/243 (20%), Positives = 94/243 (38%), Gaps = 24/243 (9%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM-SRS 81
           + GWV  ++    + FL + D   ++ + A  D      +K +     + + G++  S+ 
Sbjct: 25  IQGWVKTIQTFSSVEFLKVVDGTSLSGIQAVLDGKNLS-SKDISLGDAIEVKGVLTPSKG 83

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY----RFLDLRRDT 137
            +           EL A  I+ LS   + PL        P+ +   Y    + +  R D 
Sbjct: 84  GKQ--------SFELKATGIKSLSKTTDFPL-------IPKELTLDYLRSQQLVRHRTDL 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF---YAL 194
                  R  ++ +M       +F     P+LT++S EG  +     +     F     L
Sbjct: 129 FSAVYQIRREVVKAMNDFFYENHFYPSFAPVLTSNSCEGGAELFKLDKEYNDFFRKEQVL 188

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
                Q+   ++++G  + F   P FR E   S     EF+ +++E SF   + I+ T  
Sbjct: 189 LSVSGQFYCEIISAGLGKSFSFGPTFRSEKSNSHAHLAEFWMIEVEESFSNLEKIIQTTY 248

Query: 255 NVL 257
           N+ 
Sbjct: 249 NLF 251



 Score = 37.4 bits (85), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 5/88 (5%)

Query: 479 AFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            F +D++  G  E+A G  R    + +  + S + +  +V E  +    R +  G     
Sbjct: 350 TFSFDMIVEGVGELAGGSEREGKIDELNSSISEMNL--DVKELEWYLQLRKY--GYFSSA 405

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G   G +R++M L G KN++++S+FP S
Sbjct: 406 GFGMGFERLLMFLTGLKNIKDLSVFPRS 433


>gi|309774843|ref|ZP_07669864.1| asparagine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308917401|gb|EFP63120.1| asparagine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 460

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 121/305 (39%), Gaps = 51/305 (16%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            D   +V+L GW+   R  G + F+++ D               F  A+ V   ++  + 
Sbjct: 22  QDSMEYVQLQGWIRTNRCSGKLGFIELND------------GTYFRNAQLV---YMKELK 66

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYP-ESIRFKYRFL- 131
                    T  A  +TG+  L+ Q  +   +   E  L    +R+YP +  R  + +L 
Sbjct: 67  NFAEVEKYPTGAAITVTGKFVLTPQGKQPFEIQVTEATLEGDCDRDYPLQKKRHSFEYLR 126

Query: 132 ---DLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARD-FLVPSR 185
               LR        + R R + SM      ++  F+   TPI+T +  EGA + F   +R
Sbjct: 127 EIAHLRPRANSFYAIFRLRSVLSMAIHEFFQDQGFVYVHTPIITGNDGEGAGEMFKATTR 186

Query: 186 VN---QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
            +   +  F+   A      Q      A  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 187 EDADYEQDFFGKEAFLTVTGQLHVEAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMIEP 246

Query: 240 EMSFVEQDDILNTMEN--------VLRGVFEEFSNGNTV-------------SNNFLRIC 278
           E++F + +D +N +E+        VL    EE    NT+             +++F R+ 
Sbjct: 247 EIAFADLEDDMNLIEDMVKYCIDYVLENAPEEMKFFNTMIDKSCIERITKVRNSDFKRMT 306

Query: 279 YDDAI 283
           Y +AI
Sbjct: 307 YTEAI 311



 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 15/89 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  G  R    +V+ Q    +G++ + ++      R+GG      C    H
Sbjct: 375 DLLVPGVGELVGGSQREERYDVLEQRMKEMGMTTDSLQWYMDLRRYGG------C---KH 425

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G   G DR++M L G +N+R+V  FP +
Sbjct: 426 AGFGLGFDRLLMYLTGMQNIRDVEPFPRT 454


>gi|148241213|ref|YP_001226370.1| lysyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|166230597|sp|A5GQ58|SYK_SYNR3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|147849523|emb|CAK27017.1| Lysyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 502

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 93/187 (49%), Gaps = 14/187 (7%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRT 146
           G++ + A + ++LS + + PLP           R++ R+LDL      RDT  +    R 
Sbjct: 118 GELSVKAAQWQMLSKSLQ-PLPDKWHGLADVEKRYRQRYLDLIVSPDTRDTFRR----RA 172

Query: 147 RIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF-YALPQAPQQYKQLL 205
           ++++ +R  +   +F+E  TP+L  S P GA      +  N       L  A + + + L
Sbjct: 173 QLVSGIRRWLDERDFLEIETPVLQ-SEPGGADARPFETHHNALDLPLTLRIATELHLKRL 231

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           +  GF+R +++   FR+E   +   P EF  +++  +F + +D+++  E ++  V ++  
Sbjct: 232 VVGGFERVYELGRIFRNEGVSTRHNP-EFTSVEIYQAFADYNDMMDLTEELISSVTQQVC 290

Query: 266 NGNTVSN 272
            G+T+ N
Sbjct: 291 -GSTLIN 296



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 448 ALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPL 484


>gi|322704418|gb|EFY96013.1| aspartate-tRNA ligase [Metarhizium anisopliae ARSEF 23]
          Length = 453

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 21/148 (14%)

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-----NFIECSTP-ILTASSPEGAR 178
           R  +R LD+RR      I K    ++S  C++I E      F    TP I+TA+ P G  
Sbjct: 136 RLDHRILDVRR-AASGAIFK----LHSGMCQLIVEFLCSNGFHWIHTPRIITATIP-GDN 189

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQ 236
           +F       Q ++ A  Q+ Q +KQ+ ++    R F+I P FR E    +S R   EF  
Sbjct: 190 EFFHLPYFGQDAWLA--QSSQHHKQMALSMDMQRVFEIGPVFRAEVKSSKSTRHMTEFTV 247

Query: 237 LDMEMSFVEQDD---ILNTMENVLRGVF 261
           LD+ M+F  QDD   +   +E++L  VF
Sbjct: 248 LDIAMAF--QDDYHEVAELIESMLVFVF 273


>gi|118120219|ref|XP_001233569.1| PREDICTED: hypothetical protein, partial [Gallus gallus]
          Length = 73

 Score = 49.7 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 39/63 (61%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIIN 150
           TG IE+ A+  E+L+  ++LP  +    +  E++R +YR+LDLR   L  N+  R++++ 
Sbjct: 4   TGDIEVKAETAEVLNFCKKLPFEIKDFIKKSEALRMQYRYLDLRSSQLQYNLRLRSQVVM 63

Query: 151 SMR 153
            MR
Sbjct: 64  RMR 66


>gi|307636873|gb|ADN79323.1| lysyl t-rna synthetase:classII [Helicobacter pylori 908]
 gi|325995462|gb|ADZ50867.1| Lysyl-tRNA synthetase (class II) [Helicobacter pylori 2018]
 gi|325997060|gb|ADZ49268.1| Lysyl-tRNA synthetase class II [Helicobacter pylori 2017]
          Length = 501

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHAIEFYILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     E F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFEMEGFLEVETPMMHPI-PGGANARPFITYHNALEIERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280


>gi|207092494|ref|ZP_03240281.1| lysyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 374

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 271 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 330

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 331 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 359



 Score = 44.7 bits (104), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 6/131 (4%)

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RD 179
            +R++ R+LDL  +   K++ K R+ I++S+R     E F+E  TP++    P GA  R 
Sbjct: 26  ELRYRQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM-HPIPGGANARP 84

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+      +   Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++ 
Sbjct: 85  FITYHNALEVERY-LRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEF 142

Query: 240 EMSFVEQDDIL 250
             ++   +D++
Sbjct: 143 YWAYHTYEDLI 153


>gi|83816690|ref|YP_445039.1| lysyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83758084|gb|ABC46197.1| lysyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 514

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G+  GIDR+ M+L G +++R+V LFP+
Sbjct: 472 RALEYGMPPAAGLGVGIDRLTMILTGQESIRDVILFPL 509



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 117/271 (43%), Gaps = 26/271 (9%)

Query: 16  DVGSF-VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW----- 69
           +VG + V ++G +  +R  GG  F D+RD  G  QV         +    V +E      
Sbjct: 58  EVGGYKVSVAGRITGLRVMGGSAFFDLRDETGTIQVYVRSQDLGDDFYDEVFTELFDIGD 117

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY-------PE 122
           ++ ++G V       +           +A + ++L+ A   PLPV  E E         +
Sbjct: 118 IVGVEGFVFRTGMGEVTVR--------AADEFQLLAKALR-PLPVVKETEEETYYEVTDK 168

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDF 180
             R++ R++DL  +   + + + R+++I++MR  +  +  +E  TP+L        A  F
Sbjct: 169 EFRYRQRYVDLAVNEDVRGVFRQRSKLISTMRGFLDEQGCLEVETPVLQPVYGGASAAPF 228

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                      Y L  A + Y + L+  GF+  ++I   FR+E       P EF  ++  
Sbjct: 229 ETHHNALDMPLY-LRIADELYLKRLLVGGFEGVYEIGKDFRNEGLSRFHNP-EFTMMECY 286

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           +++ +   +++  E++LR       +  TV+
Sbjct: 287 VAYKDYRWMMDLTEDLLRTAATALHDTPTVA 317


>gi|313665716|ref|YP_004047587.1| asparagine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312950012|gb|ADR24608.1| asparagine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 454

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 24/252 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + G V   R    + F+ + D    T  QVV    +  +E A   R   ++ + G V+
Sbjct: 18  VEIIGRVRSNRQGKFVSFMILNDGTTFTDLQVVYKTKTKGYEQALQARVSSIVKVVGRVV 77

Query: 79  SRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
               +         + EL A  IE++  A E+ PL     ++   +  +      LR  T
Sbjct: 78  LTPEKQ-------QKFELQADVIELIDQAIEDYPL-----QKKEHTTEYLREIAHLRAKT 125

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARD-FLVPSRVN---QGSF 191
              N + + R   +        N  F+   +PI+T++  EGA + FLV +R +   +  F
Sbjct: 126 KTFNAIFKIRSAAAYAIHKFFNNKGFVYIHSPIITSNDAEGAGEAFLVTTREDADYEKDF 185

Query: 192 YALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           +A   +     QL     A  F + +   P FR E+  + +   EF+ ++ E++F +  D
Sbjct: 186 FAKKASLTVSGQLHAEAFAQAFKKVYTFGPTFRAENSNTVKHAAEFWMIEPEVAFADLKD 245

Query: 249 ILNTMENVLRGV 260
            +  ++++++ +
Sbjct: 246 NIQLIQDMVKYI 257


>gi|217031943|ref|ZP_03437445.1| hypothetical protein HPB128_3g62 [Helicobacter pylori B128]
 gi|298736875|ref|YP_003729405.1| lysyl-tRNA synthetase, class II [Helicobacter pylori B8]
 gi|216946412|gb|EEC25017.1| hypothetical protein HPB128_3g62 [Helicobacter pylori B128]
 gi|298356069|emb|CBI66941.1| lysyl-tRNA synthetase, class II [Helicobacter pylori B8]
          Length = 501

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
           A +++L   G EIA+G    +     L+ F N    KE  +     +      A   GMP
Sbjct: 398 ADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL GAK++++V LFP
Sbjct: 458 PTAGQGIGIDRLVMLLTGAKSIKDVILFP 486



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 13/229 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+ +    
Sbjct: 62  GRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEF-KSLKKH--LEVGDIVLVKGFPF 118

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
                 TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K++ K
Sbjct: 119 ATK---TGELSVHALEFHILSKTI-VPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFK 174

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R+ I++S+R     + F+E  TP++    P GA  R F+      +   Y L  AP+ Y
Sbjct: 175 KRSLIVSSVRKFFEMKGFLEVETPMMHPI-PGGANARPFITYHNALEVERY-LRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++
Sbjct: 233 LKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLI 280


>gi|71279363|ref|YP_271407.1| hypothetical protein CPS_4763 [Colwellia psychrerythraea 34H]
 gi|71145103|gb|AAZ25576.1| conserved hypothetical protein TIGR00462 [Colwellia psychrerythraea
           34H]
          Length = 325

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 21/168 (12%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR--------DFLVPSRVNQGSF 191
           +N  KR +I+  +R      N +E  TP L+  +             DFL  S V   + 
Sbjct: 10  QNAQKRAKILQQIRQFFAERNVVEVETPSLSQGTVTDVYLNALSCKYDFLADSPVGHSTE 69

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  +P+ + + L+ASG+   FQIA  FR E+   +  P EF  L+      +Q D+++
Sbjct: 70  LFLQTSPEFHMKRLLASGYGCIFQIAKAFRHEESGKNHNP-EFTMLEWYRIGFDQFDLMS 128

Query: 252 TMENVL-------RGVFEEFSN--GNTVSNNFLRICYD---DAIRRYG 287
            + ++L       + +F  + +    TVS + L   +D   + + +YG
Sbjct: 129 EVADLLQVVLGGDKAIFTSYQDIFLKTVSVDPLTATFDELTEVLNKYG 176


>gi|28868707|ref|NP_791326.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213969084|ref|ZP_03397223.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301384022|ref|ZP_07232440.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302058728|ref|ZP_07250269.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302131690|ref|ZP_07257680.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|38258314|sp|Q886S6|SYK_PSESM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|28851946|gb|AAO55021.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213926082|gb|EEB59638.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|331016329|gb|EGH96385.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 500

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 118/260 (45%), Gaps = 20/260 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E    V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLPEETLAEVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTSVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA-LPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L  + P GA      +  N       L  AP+ Y + L+  GF++ F+
Sbjct: 194 MQRDFLEVETPMLQ-TIPGGAAAKPFETHHNALDLEMFLRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRY 286
           V      F+R+   D+I +Y
Sbjct: 312 VFHFGEPFVRLSVFDSILKY 331



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 408 RFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTDSPSIRDVILFP 494


>gi|261253209|ref|ZP_05945782.1| asparaginyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260936600|gb|EEX92589.1| asparaginyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 466

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 107/275 (38%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V          
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYED 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKIVESPAKGQDFELAATDVKVVGWVEDAETYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + F   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGFFWVSAPLITASDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     +    Y +        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMENLPRTDKGEVDYNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + DD+    E++L+ VF+
Sbjct: 241 SRHLAEFWMVEPEVAFADLDDVAKLSEDMLKFVFK 275


>gi|165976090|ref|YP_001651683.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|303252406|ref|ZP_07338572.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247646|ref|ZP_07529687.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|259511565|sp|B0BNV4|SYN_ACTPJ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|165876191|gb|ABY69239.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|302648865|gb|EFL79055.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306855814|gb|EFM87976.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 467

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 117/288 (40%), Gaps = 38/288 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D   +   Q + N D A
Sbjct: 1   MSKFPTVSEILSGKVAVGEEVAVRGWVRTRRDSKAGLSFLAVYDGSCFDPLQSIINNDLA 60

Query: 58  CF--EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLP 113
            +  E+ + + +   + + G V+   AE        GQ +EL A  +E++   E+    P
Sbjct: 61  NYNDEVLR-LTAGCSVIVTGKVVESPAE--------GQAVELHATHVEVVGWVEDPDTYP 111

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTA 171
           +  +R    SI +      LR  T     V R R  +  ++      + F   +TP++TA
Sbjct: 112 MAAKRH---SIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITA 168

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYF 214
           S  EGA +    S ++  S     +    + Q        L  SG            + +
Sbjct: 169 SDTEGAGEMFRVSTLDLESLPRTDEGKVDFSQDFFGKESFLTVSGQLNGETYACALSKVY 228

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
              P FR E+  + R   EF+ ++ E +F    D     E++L+ VF+
Sbjct: 229 TFGPTFRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFK 276


>gi|268315876|ref|YP_003289595.1| lysyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262333410|gb|ACY47207.1| lysyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 523

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 24/264 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKSVRSEWVLCIDGL 76
           V ++G +   R  G   F D++D  G  QV       P+    ++ K +     L I  +
Sbjct: 63  VSIAGRIMTRRIMGKAAFFDLQDETGRIQVYVRRQDLPEGFYDQVFKKL-----LDIGDI 117

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE---YPE----SIRFKYR 129
           V     E        G+I + A+++E+L+ A   PLPV  E++   Y E      R++ R
Sbjct: 118 V---GVEGFVFRTRMGEITVHARRLELLAKALR-PLPVVKEQDGKVYNEVTDKEFRYRQR 173

Query: 130 FLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           + DL  +   + +  KR R+I ++R  +    ++E  TPIL        AR F+      
Sbjct: 174 YADLIINPEVREVFRKRARMITTIRRFLDERGYLEVETPILQPMYGGASARPFITYHNAL 233

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A + Y + L+  G++  ++I   FR+E       P EF  L++ +++ +  
Sbjct: 234 DMQLY-LRIADELYLKRLIVGGYEGVYEIGKDFRNEGLSRFHNP-EFTMLELYVAYKDYY 291

Query: 248 DILNTMENVLRGVFEEFSNGNTVS 271
            +++ +E +L  V  E +    V 
Sbjct: 292 WMMDFVEELLEHVATEVTGSPEVQ 315



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 26/38 (68%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP  G+  GIDR+ M+L    ++R+V LFP+
Sbjct: 464 RALEYGMPPTAGLGIGIDRLAMILTNQPSIRDVILFPL 501


>gi|14590195|ref|NP_142260.1| asparagine synthetase A [Pyrococcus horikoshii OT3]
 gi|3256659|dbj|BAA29342.1| 294aa long hypothetical asparaginyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 294

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 15/192 (7%)

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECS----TPILTASSPEGARDFLVPSRVN- 187
           + RD ++K I  +TRI++ M    + + F        +PI     P+ A + + P  V  
Sbjct: 7   ISRD-IYKVIDIQTRILDYMTKYFLGKGFKWLLPVMLSPITDPLWPDPAEEGVKPLEVEV 65

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDMEMSFVE 245
            G    L  +   +KQL +A G  + F ++P  R E    D  +   EF Q D E+   +
Sbjct: 66  YGKKMRLTHSMILHKQLAIAMGLKKIFVLSPNIRIETRERDDGKHAYEFTQFDFEVEGAK 125

Query: 246 QDDILNTMENVLRGVF---EEFSNGNTVSNNFLRIC-YDDAIRRYGTDKPD---LRNPII 298
             DI++ +E ++ G+F   EE++  +       ++  Y D +  +G+D+     +  P  
Sbjct: 126 MKDIISLVEELMHGLFRKAEEWTGRDFPKARHFKVYEYKDILDEFGSDEKASQVMEEPFW 185

Query: 299 MHNVTEHFVHSE 310
           + N+   F   E
Sbjct: 186 VINIPREFYDRE 197


>gi|69250886|ref|ZP_00605184.1| tRNA synthetase, class II (D, K and N) [Enterococcus faecium DO]
 gi|68193906|gb|EAN08486.1| tRNA synthetase, class II (D, K and N) [Enterococcus faecium DO]
          Length = 114

 Score = 49.7 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP
Sbjct: 76  ALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFP 111


>gi|329913867|ref|ZP_08276000.1| Lysyl-tRNA synthetase (class II) [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327545273|gb|EGF30527.1| Lysyl-tRNA synthetase (class II) [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 510

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR+VML+  + N+R+V LFP
Sbjct: 468 RALEYGMPPAGGCGIGIDRLVMLITDSPNIRDVILFP 504



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 5/179 (2%)

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHK 140
           AE +     TG++ +    + +++ +   PLP        + ++++ R++DL   +   +
Sbjct: 129 AEGLLFKTKTGELSIKVTALRLITKSLR-PLPDKFHGLADQEMKYRQRYVDLIMSEETRR 187

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
               RT  ++S+R  M    F+E  TP+L T      A+ F+          + L  AP+
Sbjct: 188 TFKARTATMSSIRRFMNEHEFMEVETPMLHTIPGGAAAKPFITHHNALDMQMF-LRIAPE 246

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            Y + L+  GF+R F++   FR+E   S R   EF  ++   ++V+   +++  E V+R
Sbjct: 247 LYLKRLVVGGFERVFEVNRNFRNEGV-SPRHNPEFTMMEFYAAYVDYHWLMDFTEAVIR 304


>gi|325973166|ref|YP_004250230.1| asparaginyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651768|gb|ADX97850.1| asparaginyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 439

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/243 (20%), Positives = 94/243 (38%), Gaps = 24/243 (9%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM-SRS 81
           + GWV  ++    + FL + D   ++ + A  D      +K +     + + G++  S+ 
Sbjct: 25  IQGWVKTIQTFSSVEFLKVVDGTSLSGIQAVLDGKNLS-SKDISLGDAIEVKGVLTPSKG 83

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY----RFLDLRRDT 137
            +           EL A  I+ LS   + PL        P+ +   Y    + +  R D 
Sbjct: 84  GKQ--------SFELKATGIKSLSKTTDFPL-------IPKELTLDYLRSQQLVRHRTDL 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF---YAL 194
                  R  ++ +M       +F     P+LT++S EG  +     +     F     L
Sbjct: 129 FSAVYQIRREVVKAMNDFFYENHFYPSFAPVLTSNSCEGGAELFKLDKEYNDFFKKEQVL 188

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
                Q+   ++++G  + F   P FR E   S     EF+ +++E SF   + I+ T  
Sbjct: 189 LSVSGQFYCEVISAGLGKSFSFGPTFRSEKSNSHAHLAEFWMIEVEESFSNLEKIIQTTY 248

Query: 255 NVL 257
           N+ 
Sbjct: 249 NLF 251



 Score = 37.4 bits (85), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 5/88 (5%)

Query: 479 AFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            F +D++  G  E+A G  R    + +  + S + +  +V E  +    R +  G     
Sbjct: 350 TFSFDMIVEGVGELAGGSEREGKIDKLNSSISEMNL--DVKELEWYLQLRKY--GYFSSA 405

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G   G +R++M L G KN++++S+FP S
Sbjct: 406 GFGMGFERLLMFLTGLKNIKDLSVFPRS 433


>gi|54020192|ref|YP_115926.1| asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|59798498|sp|Q600N9|SYN_MYCH2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|53987365|gb|AAV27566.1| asparagine--tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 449

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 18/272 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GW+  +R +  IIF+++ D   +   Q V   +   F+  +++     + I G+  
Sbjct: 20  VLIQGWITNIRGNLKIIFVELNDGSSFKNLQCVLKKEFIDFDKIENLALGVAVEISGIFS 79

Query: 79  SRSAETINANIITGQIELSAQK--IEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +         ++   +E+             +E+ L V   R+ P    F++R       
Sbjct: 80  NTPERQQFGEVLVETLEIKGNNYNTNFPIQNQEISLEVL--RQMP---HFRHR------S 128

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
            L + I+K R+ +   +      + FI  S PILT++  EGA +  +    N+  F    
Sbjct: 129 RLFRVIMKLRSALFFEIHKFFRRQGFINFSAPILTSNDGEGAGEVFIVDDENKDFFNKKT 188

Query: 196 Q--APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                 Q      A GF + +  AP FR E   + R   EF+ ++ E++F   + I+   
Sbjct: 189 TLGVTGQLHAEAYALGFKKVYTFAPTFRAERSNTRRHAAEFWMIEPEVAFFTLEQIIELA 248

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             +L+ V +     N     FL    D  +R+
Sbjct: 249 VKLLQKVIKSVIIRNKDEFIFLEKAGDKNLRK 280


>gi|330872775|gb|EGH06924.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 500

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 118/260 (45%), Gaps = 20/260 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E    V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLPEETLAEVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTSVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA-LPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L  + P GA      +  N       L  AP+ Y + L+  GF++ F+
Sbjct: 194 MQRDFLEVETPMLQ-TIPGGAAAKPFETHHNALDLEMFLRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRY 286
           V      F+R+   D+I +Y
Sbjct: 312 VFHFGEPFVRLSVFDSILKY 331



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 408 RFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTDSPSIRDVILFP 494


>gi|212690764|ref|ZP_03298892.1| hypothetical protein BACDOR_00251 [Bacteroides dorei DSM 17855]
 gi|237708148|ref|ZP_04538629.1| asparaginyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|237723683|ref|ZP_04554164.1| asparaginyl-tRNA synthetase [Bacteroides sp. D4]
 gi|265756804|ref|ZP_06090792.1| asparaginyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212666641|gb|EEB27213.1| hypothetical protein BACDOR_00251 [Bacteroides dorei DSM 17855]
 gi|229437894|gb|EEO47971.1| asparaginyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|229457701|gb|EEO63422.1| asparaginyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263233590|gb|EEZ19210.1| asparaginyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 467

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 111/277 (40%), Gaps = 36/277 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F  E+ 
Sbjct: 6   RTKIVDLLKCRDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLANFDEEML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEE-LPLPVFGEREY 120
           K + +   + ++G         +  +I +GQ  E+ A+ IE+L   +   PL   G    
Sbjct: 66  KQITTGACISVNG--------ELTESIGSGQAAEVQARGIEVLGTCDNTYPLQKKGH--- 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGA- 177
             ++ F      LR  T     V R R  +  ++        F    TPI+TAS  EGA 
Sbjct: 115 --TMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPIITASDCEGAG 172

Query: 178 RDFLVPSR-------------VNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221
           + F V ++             +    F+    +     QL   L A+     +   P FR
Sbjct: 173 QMFQVTTKNLYDLKKDENGAIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            E+  + R   EF+ ++ E++F +  D ++  E+ ++
Sbjct: 233 AENSNTPRHLAEFWMIEPEVAFNDITDNMDLAEDFIK 269


>gi|281357071|ref|ZP_06243561.1| tRNA synthetase class II (D K and N) [Victivallis vadensis ATCC
           BAA-548]
 gi|281316629|gb|EFB00653.1| tRNA synthetase class II (D K and N) [Victivallis vadensis ATCC
           BAA-548]
          Length = 296

 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 11/105 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           N+ +R+ +  ++R      +FIE  TP+ + A +PE   +F+   R  +G F  L  +P+
Sbjct: 6   NLTRRSALFRAIREYFYDRDFIEVETPVKIHAPAPE---EFIESVRA-EGDF--LRTSPE 59

Query: 200 QYKQLLMASGFDRYFQIAPCFR-DEDPRSDRLPG---EFYQLDME 240
              ++++A GF+R FQI  CFR DE  R  R      EFY   ME
Sbjct: 60  LAMKVMLADGFERIFQIGSCFRADEHGRRHREEFTMLEFYARGME 104


>gi|307245528|ref|ZP_07527615.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307254484|ref|ZP_07536320.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258942|ref|ZP_07540673.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306853587|gb|EFM85805.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306862534|gb|EFM94492.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306866966|gb|EFM98823.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 467

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 116/291 (39%), Gaps = 44/291 (15%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D   +   Q + N D A
Sbjct: 1   MSKFPTVSEILSGKVAVGEEVAVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDLA 60

Query: 58  CF--EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLP 113
            +  E+ + + +   + + G V+   AE        GQ +EL A  +E++   E+    P
Sbjct: 61  NYNDEVLR-LTAGCSVIVTGKVVESPAE--------GQAVELHATHVEVVGWVEDPDTYP 111

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTA 171
           +  +R    SI +      LR  T     V R R  +  ++      + F   +TP++TA
Sbjct: 112 MAAKRH---SIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITA 168

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFD 211
           S  EGA +     RV+      LP+  +                    Q      A    
Sbjct: 169 SDTEGAGEMF---RVSTLDLENLPRTEEGKVDFSQDFFGKESFLTVSGQLNGETYACALS 225

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + +   P FR E+  + R   EF+ ++ E +F    D     E++L+ VF+
Sbjct: 226 KVYTFGPTFRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFK 276


>gi|290473854|ref|YP_003466728.1| asparagine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289173161|emb|CBJ79934.1| asparagine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 466

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 106/272 (38%), Gaps = 38/272 (13%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           V S V + GWV   R    GI FL + D   +   Q V N +   ++       E +   
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFNPVQAVVNSNLPNYQ------DEVLYLT 69

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLD 132
            G  +  +   + +       EL A  + ++ + ++    P+  +R    SI +      
Sbjct: 70  TGCSVEITGTVVASQGKGQNFELQATNVVVVGMIDDPDTYPMAAKRH---SIEYLREVAH 126

Query: 133 LRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T     V R R  ++    R   E  F   S+P++TAS  EGA +     RV+   
Sbjct: 127 LRPRTNLIGAVARVRHTLSQALHRFFHEKGFFWVSSPLITASDTEGAGEMF---RVSTLD 183

Query: 191 FYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
              LP+  +                    Q      A    + +   P FR E+  + R 
Sbjct: 184 LQNLPRTDKGDVDFSKDFFGREAFLTVSGQLNGEAYACALSKIYTFGPTFRAENSNTSRH 243

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             EF+ L+ E++F + +DI +  E +L+ VF+
Sbjct: 244 LAEFWMLEPEVAFADLNDIASLAEEMLKYVFK 275


>gi|301102291|ref|XP_002900233.1| asparaginyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262102385|gb|EEY60437.1| asparaginyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 495

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 77/337 (22%), Positives = 133/337 (39%), Gaps = 69/337 (20%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRD---HYGITQVVANPDS 56
           +R R       G+   G  V + GW   +R  G     FL++ D     G+  V+   ++
Sbjct: 20  NRIRVKELLGSGLEHEGKTVTVKGWAKTLREAGAGAFAFLELNDGSCFAGVQCVINKEET 79

Query: 57  ACFEIAKSVRSEWV---LCIDGLVMSRSAETINANIITGQ-IELSAQKIEILS-VAEELP 111
             F  A ++ S  V     ++G+V+   A+        GQ +E+ A K+ +   + +   
Sbjct: 80  EGF--ADAIASGGVGASFSVEGVVVKSPAK--------GQEVEIKASKVTVYGGIPDSAT 129

Query: 112 LPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
            P+  +R   E +R       LR R  +H   ++ R  +  +         F+   TPI+
Sbjct: 130 YPMSKKRHTLEHLR---AHAHLRPRSNIHGAAMRVRNAMAFATHEFFNQRGFLYIHTPII 186

Query: 170 TASSPEGARD-FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR---------------- 212
           T S  EGA + F V + ++Q     LP   ++ K       FDR                
Sbjct: 187 TESDCEGAGEMFSVSTLLSQHPDGKLPLT-KENKVDYTKDFFDRPSYLSVSGQLNVETHC 245

Query: 213 -----YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----- 262
                 +   P FR E+  + R   EF+ ++ E++F +  D ++  E+ L+   +     
Sbjct: 246 CALSDVYTFGPTFRAENSNTSRHLAEFWMIEPEIAFADLKDDIDLAEDYLKFCVQYALDH 305

Query: 263 -----EFSNGN-----------TVSNNFLRICYDDAI 283
                EF N N           TV + F+RI Y DA+
Sbjct: 306 CTEDLEFFNKNVEKGLLERLAATVESPFVRISYTDAV 342


>gi|313682289|ref|YP_004060027.1| lysyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313155149|gb|ADR33827.1| lysyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 505

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 110/261 (42%), Gaps = 11/261 (4%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G   F+ I D  G+ Q+    D+        V  + +   D + +S   
Sbjct: 61  VAGRIKLYRLMGKASFVKIEDESGMLQIYVARDNLPENFYNDVFKKLIEVGDIIEVS--- 117

Query: 83  ETINANIIT--GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LH 139
                  IT  G++ L A K+ +L+ A   PLP        + +R++ R+LDL  ++ + 
Sbjct: 118 ---GYPFITQHGELSLHADKLTLLTKAIS-PLPEKFHGIQDKEMRYRQRYLDLIMNSEVR 173

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           K    R+++I+  R     + F+E  TP++   +        V      G    L  AP+
Sbjct: 174 KTFHIRSKVISLTRRFFEDKGFLEVETPMMHPIAGGANAKPFVTHHNALGIDRYLRIAPE 233

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E   +   P EF  ++   +F    D+++  +     
Sbjct: 234 LYLKRLIVGGFEAVFEINRNFRNEGMDATHNP-EFTSIEFYWAFKTYKDLISITKEYFEY 292

Query: 260 VFEEFSNGNTVSNNFLRICYD 280
           +F+       +    L + +D
Sbjct: 293 LFDHLDLPKRLPYGELEVDFD 313



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GM P  G   GIDR+VM+L    ++R+V LFP
Sbjct: 454 ALSYGMAPTAGQGIGIDRLVMMLTNQHSIRDVLLFP 489


>gi|219870610|ref|YP_002474985.1| asparaginyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|259511568|sp|B8F3Y5|SYN_HAEPS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|219690814|gb|ACL32037.1| asparaginyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 467

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 134/333 (40%), Gaps = 65/333 (19%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D   +   Q + N D +
Sbjct: 1   MSKFPTISEILSGKVAVGEEVAVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDLS 60

Query: 58  CF--EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLP 113
            +  E+ + + +   + + G+++   AE        GQ +EL A+ +E++   E+    P
Sbjct: 61  NYQDEVLR-LTAGCSVIVTGVIVESPAE--------GQAVELQAKSVEVVGWVEDPDTYP 111

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTA 171
           +  +R    SI +      LR  T     V R R  +  ++      + F   +TP++TA
Sbjct: 112 MAAKRH---SIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITA 168

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQA-------PQQY---KQLLMASG----------FD 211
           S  EGA +     RV+      LP+         Q +   +  L  SG            
Sbjct: 169 SDTEGAGEMF---RVSTLDLENLPRGEDGKVDFSQDFFGRESFLTVSGQLNGETYACALS 225

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL----RGVFEEFSNG 267
           + +   P FR E+  + R   EF+ ++ E +F    D     E++L    R V EE  + 
Sbjct: 226 KVYTFGPTFRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFRAVLEERKDD 285

Query: 268 -----------------NTVSNNFLRICYDDAI 283
                            N ++++F +I Y DAI
Sbjct: 286 LKFFEKHIDNTVISRLENFINSDFAQIDYTDAI 318


>gi|156842373|ref|XP_001644554.1| hypothetical protein Kpol_1003p1 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115200|gb|EDO16696.1| hypothetical protein Kpol_1003p1 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 571

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 10/127 (7%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------QGSFYAL 194
           ++ R+ II  +R  +  +NFIE  TPIL+  S  GA      ++++       Q + + L
Sbjct: 219 LILRSFIIKQIRSFLDIQNFIEVETPILSNKS-NGAHATPFETKLSSMKHDPLQSNLF-L 276

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+ SG DR ++I   FR+E       P EF  L+   S+   +D++N  +
Sbjct: 277 RISPELWLKRLIVSGLDRVYEIGKVFRNEGIDQTHNP-EFTTLEFYQSYASLEDLINQSQ 335

Query: 255 NVLRGVF 261
           ++ + + 
Sbjct: 336 DLFKFIL 342



 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 23/35 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           A + GMPP GG+  GIDR+ MLLL  + + EV  F
Sbjct: 528 AMKWGMPPIGGLGLGIDRLCMLLLNKQRIDEVLSF 562


>gi|330896020|gb|EGH28243.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 500

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 118/260 (45%), Gaps = 20/260 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  N  +   E    V++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVNRKTLPEETLAEVKT-WDL---GDIIA--AEGTLARSGKGDLYVE 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL   + + +    R+++I  +R  +
Sbjct: 135 MTSVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFL 193

Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA-LPQAPQQYKQLLMASGFDRYFQ 215
           +  +F+E  TP+L  + P GA      +  N       L  AP+ Y + L+  GF++ F+
Sbjct: 194 MKRDFLEVETPMLQ-TIPGGAAAKPFETHHNPLDMEMFLRIAPELYLKRLVVGGFEKVFE 252

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------EFSNGNT 269
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +      +   G+ 
Sbjct: 253 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDK 311

Query: 270 V---SNNFLRICYDDAIRRY 286
           V      F+R+   D+I +Y
Sbjct: 312 VFHFGEPFVRLSVFDSILKY 331



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 408 RFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTDSPSIRDVILFP 494


>gi|269968459|ref|ZP_06182473.1| asparaginyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269826933|gb|EEZ81253.1| asparaginyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 472

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 106/275 (38%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V          
Sbjct: 22  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYED 69

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 70  EVLKLTTGCSVEVTGKIVESPAKGQDFELAATDVKVVGWVEDAETYPMAKTRH---SIEY 126

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 127 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 186

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y +        L  SG            + +   P FR E+  +
Sbjct: 187 TLDMENLPRTDAGKVDYNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNT 246

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F E DD+    E++L+ VF+
Sbjct: 247 SRHLAEFWMVEPEVAFAELDDVAKLAEDMLKYVFK 281


>gi|161598447|ref|YP_116617.2| lysyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 522

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 5/163 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLPV   +E  E  R + R++DL  R    +    R  ++ ++R  +    F+E  TP+L
Sbjct: 168 PLPV-AHKEMNEESRVRQRYVDLIVRPEARQMARTRVAVVRALRNALERRGFLEVETPML 226

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T      AR F+  S       Y L  AP+ + +  +  G ++ F+I   FR+E   S 
Sbjct: 227 QTLHGGAAARPFVTHSNALDMDLY-LRIAPELFLKRCVVGGLEKVFEINRNFRNEGADST 285

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
             P EF  L+   ++   DD    +  +++ V +E      V+
Sbjct: 286 HSP-EFAMLETYEAYGTYDDSATMIRELIQEVAQEALGTQVVT 327



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL------YRAFQCGMP 534
           ++DL   GFE+A+G   + + + ++Q    V  ++   +     +        A + GMP
Sbjct: 430 KWDLYVRGFELATG--YSELVDPVIQRERFVDQARLAAQGDDEAMVLDEDFLAAMEHGMP 487

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P  G   GIDR++M L G   +RE  LFP+
Sbjct: 488 PTTGTGMGIDRLLMALTGL-GIRETILFPI 516


>gi|156740037|ref|YP_001430166.1| lysyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|189082965|sp|A7NFC6|SYK_ROSCS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|156231365|gb|ABU56148.1| lysyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 489

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 4/163 (2%)

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182
           R + R+LDL  +   +++ + R  I+ +MR  +    F+E  TP L        AR F+ 
Sbjct: 151 RHRQRYLDLIVNPEVRDVFRTRATIVRTMRRFLDERGFLEVETPTLQPIYGGASARPFIT 210

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                +   Y L  A + Y + L+  GF+R ++I+  FR+E       P EF  ++   +
Sbjct: 211 HHNQLKQDLY-LRIAVELYLKRLIVGGFERVYEISKVFRNEGVDRTHNP-EFTMMECYQA 268

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           + +  D++  +E++ R +  E +   T+      I +  A RR
Sbjct: 269 YADYHDMMRLVEDLYRALALEVTGSTTIVFQGQTIDFGPAWRR 311



 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP GG+  GIDR VML     ++REV LFP
Sbjct: 448 ALMYGMPPTGGLGIGIDRTVMLFTDQPSIREVILFP 483


>gi|88812698|ref|ZP_01127945.1| Lysyl-tRNA synthetase-related protein [Nitrococcus mobilis Nb-231]
 gi|88790114|gb|EAR21234.1| Lysyl-tRNA synthetase-related protein [Nitrococcus mobilis Nb-231]
          Length = 323

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 67/125 (53%), Gaps = 17/125 (13%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ---- 506
           ++ F ++ F   Q  +  L+ +D     A +++L  NG E+A+G   + +++ + Q    
Sbjct: 206 RLTFVYD-FPASQAALARLRPDD--PRVAERFELFSNGVELANG--YHELTDAVEQRLRF 260

Query: 507 -----AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
                A + +G+    V+ R   L  A + G+PP  G+A G+DR++M + GA+++ EV  
Sbjct: 261 ERERAARARLGLPLPDVDAR---LLAAMEAGLPPCAGVALGLDRLIMHVCGARHIDEVIA 317

Query: 562 FPMSQ 566
           FP+ +
Sbjct: 318 FPIER 322


>gi|46107986|ref|XP_381051.1| hypothetical protein FG00875.1 [Gibberella zeae PH-1]
          Length = 581

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 110/237 (46%), Gaps = 19/237 (8%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW-----VLCIDGLVMSRSAETIN---A 87
           +IF+DI + +   QV+ N  S C    +  R ++     ++ +   + + S   I     
Sbjct: 75  LIFIDIVNEFTRLQVMVN-RSKCMVDQEDRRLKFGMFRSLIEVGDHIYAYSLAAITGIPT 133

Query: 88  NIITGQIELSAQKI-EILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK- 144
               G++ + A+ + E+LS   E++P     E+      R + R +D+  +    ++++ 
Sbjct: 134 RTKAGELTIEAKALPELLSPTMEQIP-----EKLTDPKTRMQERHVDMLVNREAIDVLRL 188

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQ 203
           R  I   MR    ++ F+E  TPIL  ++    AR F+  +   +    AL  AP+ + +
Sbjct: 189 RAEITKYMRDYFHSKRFLEFQTPILAQNAGGAVARPFVTRATEFKDKDLALRIAPELWLK 248

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            L+  G D+ F+I P FR+E   +   P EF   +   ++   +D++   E +L G+
Sbjct: 249 RLVIGGVDKVFEIGPSFRNEGVDATHNP-EFTMCEFYSAYTNLEDLIKETEEILCGL 304


>gi|317047577|ref|YP_004115225.1| asparaginyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316949194|gb|ADU68669.1| asparaginyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 466

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 112/276 (40%), Gaps = 46/276 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V S V + GWV R R          RD       +A  D +CF   ++V +  +      
Sbjct: 16  VDSEVTVRGWV-RTR----------RDSKAGLSFIAVYDGSCFNPVQAVVNNSLNNYQDE 64

Query: 77  VMSRSAETINANIITGQI----------ELSAQKIEILS-VAEELPLPVFGEREYPESIR 125
           V+  +  T  + I+TG++          EL A ++E++  V +    P+  +R    SI 
Sbjct: 65  VLRLT--TGCSVIVTGKVVESPGEGQAFELQATQVEVVGWVDDPDTYPMAAKRH---SIE 119

Query: 126 FKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVP 183
           +      LR  T     V RTR  +     R   EN +   STP++TAS  EGA +    
Sbjct: 120 YLREVAHLRPRTNLIGAVARTRHTLAQALHRFFHENGYFWVSTPLITASDTEGAGEMFRV 179

Query: 184 SRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPR 226
           S ++  +    PQ    Y +        L  SG            + +   P FR E+  
Sbjct: 180 STLDMENLPRDPQGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 239

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + R   EF+ L+ E++F   DD     E +L+ VF+
Sbjct: 240 TSRHLAEFWMLEPEVAFATLDDAAALAEAMLKYVFK 275



 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|15487831|gb|AAL00964.1|AF401676_1 L-lysyl tRNA synthetase [Lactobacillus sakei]
          Length = 141

 Score = 49.3 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 8/52 (15%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GI ++ VE        A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 86  GIDEDYVE--------ALEYGMPPTGGLGIGIDRLVMLLTDAASIRDVLLFP 129


>gi|32491012|ref|NP_871266.1| asparaginyl-tRNA synthetase [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|31340439|sp|Q8D2U1|SYN_WIGBR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|25166218|dbj|BAC24409.1| asnS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 466

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 118/279 (42%), Gaps = 50/279 (17%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            V ++GWV   R    GI F+D+ D   +   QV+A  D + +      +S+ +    G 
Sbjct: 19  LVEINGWVRTKRNSKLGISFVDVYDGSCLQHIQVIAKKDLSNY------KSDILRLTSGC 72

Query: 77  ------VMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYR 129
                 V+ +S +  N+ I     EL A  I++L  + +    P+  +   P ++ +   
Sbjct: 73  SVKIFGVLKKSLK--NSKIY----ELHATCIKVLGWIKDPGKYPISSK---PHTLEYLRS 123

Query: 130 FLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           F  LR  T     V R R  I   +   +  + FI   +PI+T+ + EG+ +     +V+
Sbjct: 124 FSHLRPRTNIIGSVSRIRNIIFQEVHNFLNKKGFIWVPSPIITSLNTEGSGEMF---KVS 180

Query: 188 QGSFYALPQAPQQY----------KQLLMASG----------FDRYFQIAPCFRDEDPRS 227
              F  +P    +           +  L  SG            + +   P FR E+  +
Sbjct: 181 TFDFKKIPLNKNKLINYRKDFFGKRTFLTVSGQLHIESYACSLSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
            R   EF+ +++E++F + +DI+    N+L  +F++  N
Sbjct: 241 SRHLAEFWMVEIEIAFAKLNDIILLAYNLLSNIFKKVLN 279



 Score = 37.0 bits (84), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + G  PH G   GI+R++  + G KN+R+V  FP S 
Sbjct: 425 KYGTVPHSGFGLGIERLISYVTGLKNIRDVIPFPRSS 461


>gi|310659670|ref|YP_003937391.1| asparaginyl tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308826448|emb|CBH22486.1| asparaginyl tRNA synthetase [Clostridium sticklandii]
          Length = 464

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/345 (21%), Positives = 133/345 (38%), Gaps = 57/345 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
           +G  + + GW+  +R      F+++ D   +   Q+V +     F ++AK   +  +   
Sbjct: 18  MGKEIVIQGWIRTLRDSKNFGFIEVNDGSFFKNLQIVFDETLDNFKDVAKLPIATAIKVT 77

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             LV +  A+           E+ A+ I ++        P+  +R   E +R       L
Sbjct: 78  GDLVKTEGAKQ--------PFEIKAKSI-VVEAPSSSDFPLQKKRHTFEYLR---TIAHL 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGA--------RDFLVP 183
           R  +   + V R R + +       ++  F+   TPI+T S  EGA         D   P
Sbjct: 126 RPRSNAFSAVFRVRSVAAYAIHKFFQDRGFVYVHTPIITGSDAEGAGEMFRVTTLDLKNP 185

Query: 184 SRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            +   GS      F+          QL   + A  +   +   P FR E+  + R   EF
Sbjct: 186 PKNADGSIDNTQDFFGKETNLTVSGQLEGEIFALAYKDIYTFGPTFRAENSNTSRHAAEF 245

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNN 273
           + ++ E++F E +D +   E++++ +            EF              N VSN+
Sbjct: 246 WMIEPEIAFAELEDNMELAEDMIKYIISYVLENAPEEMEFFGSIVDKDLLPRLQNVVSND 305

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK 316
           F R+ Y +AI+       +   P+   M   TEH  +   ++F K
Sbjct: 306 FGRVTYTEAIKLLQESGHNFEYPVSWGMDLQTEHERYITEQIFKK 350


>gi|307546433|ref|YP_003898912.1| lysyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307218457|emb|CBV43727.1| lysyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 517

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 6/149 (4%)

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFL 181
           R++ R++DL  +   + + + R  +I++MR       F+E  TP+L    P GA  R F+
Sbjct: 167 RYRQRYVDLIMNPDSRRVFETRAGVISAMRRFFEDHGFMEVETPMLQ-PIPGGATARPFI 225

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  ++   
Sbjct: 226 THHNALDIDMY-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNP-EFTMVEYYQ 283

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTV 270
           ++ +  D+++  E +LR V  E     TV
Sbjct: 284 AYADYQDLMDFTEAMLRTVTREVLGDTTV 312



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G E+A+G    + +E   + F+     K+  +     +   Y RA + G+PP 
Sbjct: 424 RFEFFVGGRELANGFSELNDAEDQAERFAAQAAEKDAGDQEAMYYDADYVRALEYGLPPT 483

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G   GIDR+VMLL  + ++R+V LFP  +   D
Sbjct: 484 AGEGIGIDRLVMLLTDSASIRDVLLFPAMRPSAD 517


>gi|241890039|ref|ZP_04777337.1| lysyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863661|gb|EER68045.1| lysyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 499

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 459 ALEYGMPPTGGLGIGIDRLVMLLTNSASIRDVLLFP 494


>gi|161723246|ref|YP_096294.2| asparaginyl-tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 467

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 120/303 (39%), Gaps = 45/303 (14%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACF- 59
           +    C D  +S +   V + GWV   R    G+ F+ + D   +   Q+VA    + + 
Sbjct: 5   FTIKQCLDGEIS-IDETVTVRGWVKTRRDSKAGLSFISLHDGSCFSPIQIVATDQLSNYH 63

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEEL-PLPVFG 116
            E+ K      ++    LV S+           GQ  E+ A+ IE++   E     P+  
Sbjct: 64  KEVTKLTAGCSMIATGKLVASQGK---------GQFFEIQAESIEVVGWVENPDTYPIQA 114

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           +R   E +R +   L  R +T+      R  +  ++      + F    TPI+TAS  EG
Sbjct: 115 KRHTLEFLR-EVAHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEG 173

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQY----------KQLLMASG----------FDRYFQI 216
           A +     RV+      +P+  +            +  L  SG            + +  
Sbjct: 174 AGEMF---RVSTLDLLNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMSKVYTF 230

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR----GVFEEFSNGNTVSN 272
            P FR E+  + R   EF+ ++ E++F   +DI    +N+LR     V EE ++     N
Sbjct: 231 GPTFRAENSNTSRHLAEFWMIEPEIAFANLEDICKLSQNMLRYLCKTVLEERADDMDFFN 290

Query: 273 NFL 275
            F+
Sbjct: 291 QFV 293


>gi|300312097|ref|YP_003776189.1| lysyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300074882|gb|ADJ64281.1| lysyl-tRNA synthetase (Class II) protein [Herbaspirillum
           seropedicae SmR1]
          Length = 513

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY 526
           + +D ++    +++L   G EIA+G    + +E     F     +K+  +     +   Y
Sbjct: 410 RASDTVAGITERFELFITGREIANGFSELNDAEDQAARFHAQVAAKDAGDEEAMYYDADY 469

Query: 527 -RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GMPP GG   GIDR++ML+  + N+R+V LFP
Sbjct: 470 IRALEYGMPPAGGCGIGIDRLMMLITDSPNIRDVILFP 507



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 84/171 (49%), Gaps = 7/171 (4%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           TG++ +   K+++++ +   PLP        + ++++ R++DL   +   +    RT  +
Sbjct: 137 TGELSVKVTKLKLITKSLR-PLPDKFHGLADQEMKYRQRYVDLIMSEETRRTFKARTAAM 195

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           +S+R  M    F+E  TP+L    P GA  + F+          + +  AP+ Y + L+ 
Sbjct: 196 SSIRRFMETHGFMEVETPMLH-PIPGGAAAKPFITHHNALDMQMF-MRIAPELYLKRLVV 253

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            GF+R F+I   FR+E   S R   EF  ++   ++V+   ++   E V+R
Sbjct: 254 GGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYVDYQWLMGFTEQVIR 303


>gi|329767267|ref|ZP_08258794.1| lysyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836934|gb|EGF86581.1| lysyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 499

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 459 ALEYGMPPTGGLGIGIDRLVMLLTNSASIRDVLLFP 494


>gi|312601373|gb|ADQ90628.1| Asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 449

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 18/272 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GW+  +R +  IIF+++ D   +   Q V   +   F+  +++     + I G+  
Sbjct: 20  VLIQGWITNIRGNLKIIFVELNDGSSFKNLQCVLKKEFIDFDKIENLALGVAVEISGIFS 79

Query: 79  SRSAETINANIITGQIELSAQK--IEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +         ++   +E+             +E+ L V   R+ P    F++R       
Sbjct: 80  NTPERQQFGEVLVETLEIKGNNYNTNFPIQNQEISLEVL--RQMP---HFRHR------S 128

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
            L + I+K R+ +   +      + FI  S PILT++  EGA +  +    N+  F    
Sbjct: 129 RLFRVIMKLRSALFFEIHKFFRRQGFINFSAPILTSNDGEGAGEVFIVDDENKDFFNKKT 188

Query: 196 Q--APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                 Q      A GF + +  AP FR E   + R   EF+ ++ E++F   + I+   
Sbjct: 189 TLGVTGQLHAEAYALGFKKVYTFAPTFRAERSNTRRHAAEFWMIEPEVAFFTLEQIIELA 248

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             +L+ V +     N     FL    D  +R+
Sbjct: 249 VKLLQKVIKSVIIRNKDEFIFLEKAGDKNLRK 280


>gi|257784989|ref|YP_003180206.1| lysyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473496|gb|ACV51615.1| lysyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 533

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 115/262 (43%), Gaps = 22/262 (8%)

Query: 10  GDLGVSDVGSFV-RLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEIAKSV 65
            DL     G  V  ++G V  +R  G I F+ + D+ G  Q+   + N D   +E+   +
Sbjct: 81  ADLEDGQTGEEVYSVAGRVRAIRNQGKIAFVVVEDYTGQIQLFCRINNLDEKNWELLGLL 140

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
               ++   G +M             GQ+ L+   +E+LS +   PLP          +R
Sbjct: 141 DLGDIIGATGAIMRTR---------RGQLSLAVTSLEVLSKSLR-PLPEKFHGLTDREVR 190

Query: 126 FKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
           ++ R++DL  +   +++  KR++II+ +R  M A+ ++E  TP+L        A+ F+  
Sbjct: 191 YRQRYVDLIMNPEVRDVFRKRSQIISIIRQFMEADGYMEVETPVLQEILGGANAKPFITH 250

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y         K+LL+  G +R +++   FR+E       P EF  ++   ++
Sbjct: 251 YNALNTEDYLRIATELPLKRLLVG-GLERVYELGRQFRNEGTDLTHNP-EFTSMEAYAAY 308

Query: 244 VEQDDILNTMENVLRGVFEEFS 265
            +    L  M  + + +F+E +
Sbjct: 309 SD----LAGMRELSQNLFQEIA 326



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GGI  GIDR++ML     ++R+V LFP
Sbjct: 490 RALEYGMPPAGGIGYGIDRMMMLFCDQPSIRDVLLFP 526


>gi|300769986|ref|ZP_07079865.1| asparagine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762462|gb|EFK59279.1| asparagine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 481

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 38/274 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-----NPDSACFEIAKSVR 66
           L  ++ G  V + GWV   R +    F+ I D   I  + A     N D A     K + 
Sbjct: 10  LNATEFGQEVIVKGWVRTFRNNQ---FIAINDGSSINNIQAVVDFENTDDALL---KRIT 63

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           +   + + G        T+  ++  GQ +E+   +++++  ++    P+  ++   E +R
Sbjct: 64  TGAAVRVKG--------TLIESLGKGQKVEVKVTELDVIGDSDPEKFPLQPKKHSLEFLR 115

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-------- 177
            +   L  R  T +     R  +  ++       +F+   TPI+T S  EGA        
Sbjct: 116 -EIAHLRFRTGTFNAIFKVRNALSFAVHRFFNERDFVYMHTPIITGSDAEGAGEMFRVTT 174

Query: 178 RDFLVPSRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSD 228
            D   P R   G       F+          QL   L A  F   +   P FR E+  + 
Sbjct: 175 LDLNNPPRTENGDIDFKEDFFGKSTNLTVSGQLEGELAALAFGNIYTFGPTFRAENSNTT 234

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           R   EF+ ++ EM+F E +D ++  E +L+ V +
Sbjct: 235 RHLAEFWMIEPEMAFYELEDNMDLAEALLKYVIQ 268



 Score = 40.4 bits (93), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 20/113 (17%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEV 517
           F M Q   ++L  N + ++     D++  G  E+  G  R    + +L   + VGI  E 
Sbjct: 377 FYMKQNEPDALGRNTVRAM-----DILFPGIGEMVGGSQREENLDKLLARMAEVGIPAEE 431

Query: 518 VE-----NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           +E      RFG +         PH G   G +R+V+ + G  N+R+V  FP +
Sbjct: 432 MEWFLDTRRFGSV---------PHSGFGVGFERLVLFVTGMTNIRDVIPFPRT 475


>gi|226947851|ref|YP_002802942.1| asparagine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226843596|gb|ACO86262.1| asparagine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 463

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 121/306 (39%), Gaps = 55/306 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V+++GWV  VR      F+++ D   +   QV+       F+    +     + ++G+V 
Sbjct: 21  VKINGWVRTVRDSKNFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTSVEVEGIVQ 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                T NA       E+ A ++ I   +     P+  +R   E +R       LR  + 
Sbjct: 81  P----TPNAK---QPFEIKATRVSIEGKSS-TDYPLQKKRHTFEYLR---TIAHLRPRSN 129

Query: 139 HKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSRVN 187
             + V R R + +       +   F+  +TPI+T S  EGA +           +P +  
Sbjct: 130 AFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDLNNIP-KTE 188

Query: 188 QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +G       F+  P       QL     A  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 EGKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHASEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNFLRI 277
            EM+F E  D L+  E++++ V              F  F +        N V+++F RI
Sbjct: 249 PEMAFAELTDYLDNAEDMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDNVVNSDFKRI 308

Query: 278 CYDDAI 283
            Y +A+
Sbjct: 309 TYTEAV 314


>gi|329769858|ref|ZP_08261257.1| lysyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328837912|gb|EGF87536.1| lysyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 500

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 460 ALEYGMPPTGGLGIGIDRLVMLLTNSASIRDVLLFP 495


>gi|297570864|ref|YP_003696638.1| lysyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931211|gb|ADH92019.1| lysyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 529

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 111/258 (43%), Gaps = 27/258 (10%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
            V ++G V  +RP G I F+ ++D  G   QV+       F +A +V  E +  +   V 
Sbjct: 85  MVGIAGRVMFMRPSGKIAFVVLQDGAGTRIQVI-------FSLA-NVGKEALDALKADVD 136

Query: 79  SRSAETINANIIT---GQIELSAQKIEILSVAEELPLPVF------GEREYPESIRFKYR 129
                 +N ++ T   G++ + A   E+ S A   PLP         E    E  R + R
Sbjct: 137 LGDFIFVNGHVGTSKRGELSVFAHVWEMASKAIR-PLPKTFTTADGQEMALSEESRVRAR 195

Query: 130 FLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
            LDL      +++++ R +++ S+R    AE FIE  TPIL        AR F       
Sbjct: 196 HLDLITRQGARDMIRIRAKVMRSLRDTFDAERFIELETPILQVLHGGAAARPFTTHINAY 255

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A + Y +  +  G +R ++I   FR+E   S   P EF  L+   ++   D
Sbjct: 256 DQDLY-LRIATELYLKRAVVGGVERVYEIGKNFRNEGADSSHSP-EFTALEAYEAYGTYD 313

Query: 248 DIL----NTMENVLRGVF 261
            +     + ++N  R VF
Sbjct: 314 SMARLTRDLVQNAARDVF 331


>gi|168183293|ref|ZP_02617957.1| asparagine--tRNA ligase [Clostridium botulinum Bf]
 gi|237793933|ref|YP_002861485.1| asparaginyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182673549|gb|EDT85510.1| asparagine--tRNA ligase [Clostridium botulinum Bf]
 gi|229263698|gb|ACQ54731.1| asparagine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 463

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 121/306 (39%), Gaps = 55/306 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V+++GWV  VR      F+++ D   +   QV+       F+    +     + ++G+V 
Sbjct: 21  VKINGWVRTVRDSKNFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTSVEVEGIVQ 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                T NA       E+ A ++ I   +     P+  +R   E +R       LR  + 
Sbjct: 81  P----TPNAK---QPFEIKATRVSIEGKSS-TDYPLQKKRHTFEYLR---TIAHLRPRSN 129

Query: 139 HKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSRVN 187
             + V R R + +       +   F+  +TPI+T S  EGA +           +P +  
Sbjct: 130 AFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDLNNIP-KTE 188

Query: 188 QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +G       F+  P       QL     A  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 EGKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHASEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNFLRI 277
            EM+F E  D L+  E++++ V              F  F +        N V+++F RI
Sbjct: 249 PEMAFAELTDYLDNAEDMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDNVVNSDFKRI 308

Query: 278 CYDDAI 283
            Y +A+
Sbjct: 309 TYTEAV 314


>gi|116329779|ref|YP_799498.1| tRNA synthetase class II (D, K and N) [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116122672|gb|ABJ80565.1| tRNA synthetase class II (D, K and N) [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
          Length = 315

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 10/170 (5%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD-FLV--PSRVNQGSFYALPQA 197
           ++KR + ++ +R     +N++E  TP L A  S E   D FLV  PSR  +G    L  +
Sbjct: 9   LIKRAQFLSVLRKFFEKKNYLEMDTPCLKAVPSMEPYLDPFLVRSPSRKEKG---YLITS 65

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+   + +++ G ++ ++I   FR  +  S     EF  L+     +  +D++N    +L
Sbjct: 66  PEYSLKEILSKGLEKIYEITHTFRSGEEGSLFHSAEFLMLEFYTVGISLEDLMNFCTELL 125

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRY---GTDKPDLRNPIIMHNVTE 304
             +  EF       N   +I  ++++R+Y   G  K +L   I+   ++E
Sbjct: 126 EVLDCEFQAFGFDRNKVRKISVEESLRKYAHCGISKSELDRVILERRLSE 175



 Score = 39.7 bits (91), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 27/37 (72%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           GL RA + G+P   GI+ G+DR+++ +LG  ++RE+S
Sbjct: 273 GLERALREGIPDSCGISIGLDRLLLCILGGSSLREIS 309


>gi|195429240|ref|XP_002062671.1| GK19574 [Drosophila willistoni]
 gi|194158756|gb|EDW73657.1| GK19574 [Drosophila willistoni]
          Length = 459

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 108/266 (40%), Gaps = 30/266 (11%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           +G +  G    + GW+  +R     IFLDI D  G T       S  F+I     S    
Sbjct: 17  VGKAQTGDSFSVKGWIKNIRRLKNNIFLDIND--GST-------SGRFQIVLPRDSHTQK 67

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130
              G V+S   +   A    G  EL A  +E L+  + +   P   ++++P     ++  
Sbjct: 68  LTSGTVVSAQGKIQVAP--NGHYELHADAVESLADGQLQDGFPFSPKQKHPPEYVREHLH 125

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPSRVNQ 188
           L  R D     +  R +    +   M    F++ +TP+LT +  EGA +   + P   + 
Sbjct: 126 LRSRIDYFAAQMRLRHKAQKIIHDYMDELEFVQINTPLLTTNDCEGAGEVFRVQPDSEDL 185

Query: 189 GSFYALPQAP--QQY---KQLL----------MASGFDRYFQIAPCFRDEDPRSDRLPGE 233
               + P  P  Q Y   K  L          M+ G    + +AP FR E+ +S     E
Sbjct: 186 LKQMSRPNVPLDQSYFDHKVFLTVSGQLHLEAMSYGLGNTYTMAPAFRAENSKSPLHLAE 245

Query: 234 FYQLDMEMSFVEQ-DDILNTMENVLR 258
           FY  + E+  ++  +++   +E +L+
Sbjct: 246 FYMFEAELVHLKHLEELSGFIEKMLK 271


>gi|22297756|ref|NP_681003.1| lysyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|34222748|sp|Q8DMA9|SYK_THEEB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|22293933|dbj|BAC07765.1| lysyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 506

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/247 (21%), Positives = 110/247 (44%), Gaps = 14/247 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V ++G +   R  G + F  ++D  G  Q+  +  +    + ++  ++     D  
Sbjct: 56  VGDRVSVAGRIMARRIFGKLAFFTLQDDSGTIQLYLDKQTISQTMGEAAFADLKHLTDVG 115

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--- 133
            +  +  T+      G++ +  +   +L+ +  LPLP           R++ R++DL   
Sbjct: 116 DILGAVGTLK-RTEKGELSVVVESYTMLTKSL-LPLPDKWHGLTDVEKRYRQRYVDLIVN 173

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
              RDT  K    R  I  ++R  +  + FIE  TP+L   +    AR F+      +  
Sbjct: 174 PQVRDTFRK----RALITAAIRRYLNEQGFIEIETPVLQVEAGGAEARPFITYHNTLEMQ 229

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + + + L+  GF++ +++   FR+E   +   P EF  +++  ++ + +D++
Sbjct: 230 LY-LRIATELHLKRLIVGGFEKVYELGRIFRNEGISTKHNP-EFTSIEVYQAYADYNDMM 287

Query: 251 NTMENVL 257
              E ++
Sbjct: 288 TLTEAII 294



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 460 ALEHGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPL 496


>gi|257124941|ref|YP_003163055.1| lysyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257048880|gb|ACV38064.1| lysyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 494

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VML   + ++R+V LFP
Sbjct: 449 RALEYGMPPAGGLGIGIDRLVMLQTNSASIRDVILFP 485



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 7/170 (4%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRI 148
           TG++ L     E+LS     PLP           R++ R++DL   R+ + + + KR +I
Sbjct: 118 TGELTLRVDSFEVLS-KNVRPLPEKFHGLTNIETRYRQRYVDLVMNREVM-ETMKKRFQI 175

Query: 149 INSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I   R  +    F E  TP++   +    AR F+          + L  AP+ Y + L+ 
Sbjct: 176 IRFFRSYLEKHGFTEVETPMMHPVAGGATARPFVTHHNALDMELF-LRIAPELYLKRLLV 234

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            GF++ F+I   FR+E       P EF  +++  ++ + +D+++  E+++
Sbjct: 235 GGFEKVFEINRSFRNEGISIKHNP-EFTMMELYQAYADFNDMMDLTEDLI 283


>gi|52629606|gb|AAU28347.1| asparaginyl tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 478

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 120/303 (39%), Gaps = 45/303 (14%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACF- 59
           +    C D  +S +   V + GWV   R    G+ F+ + D   +   Q+VA    + + 
Sbjct: 16  FTIKQCLDGEIS-IDETVTVRGWVKTRRDSKAGLSFISLHDGSCFSPIQIVATDQLSNYH 74

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEEL-PLPVFG 116
            E+ K      ++    LV S+           GQ  E+ A+ IE++   E     P+  
Sbjct: 75  KEVTKLTAGCSMIATGKLVASQGK---------GQFFEIQAESIEVVGWVENPDTYPIQA 125

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           +R   E +R +   L  R +T+      R  +  ++      + F    TPI+TAS  EG
Sbjct: 126 KRHTLEFLR-EVAHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEG 184

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQY----------KQLLMASG----------FDRYFQI 216
           A +     RV+      +P+  +            +  L  SG            + +  
Sbjct: 185 AGEMF---RVSTLDLLNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMSKVYTF 241

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR----GVFEEFSNGNTVSN 272
            P FR E+  + R   EF+ ++ E++F   +DI    +N+LR     V EE ++     N
Sbjct: 242 GPTFRAENSNTSRHLAEFWMIEPEIAFANLEDICKLSQNMLRYLCKTVLEERADDMDFFN 301

Query: 273 NFL 275
            F+
Sbjct: 302 QFV 304


>gi|260768310|ref|ZP_05877244.1| asparaginyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260616340|gb|EEX41525.1| asparaginyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 466

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 107/275 (38%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V         +
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYDN 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKIVESPASGQAFELAATDVKVVGWVEDADTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y +        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMENLPRTDAGKVDYNEDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F E DD+    E++L+ VF+
Sbjct: 241 SRHLAEFWMVEPEVAFAELDDVAKLAEDMLKYVFK 275


>gi|118475508|ref|YP_892300.1| lysyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|118414734|gb|ABK83154.1| lysyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 504

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 4/135 (2%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRII 149
           TG+  + A KI + S A   PLP          +R++ R+LD+  D  +  + VKR+ II
Sbjct: 125 TGEFSIHASKIVLASKAIS-PLPEKFHGLTDIEMRYRQRYLDMIMDKDVRADFVKRSLII 183

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           +++R     + F+E  TP++   +    A+ F+          Y L  AP+ Y + L+  
Sbjct: 184 STIRRFFEDKGFLEVETPMMHPIAGGANAKPFITHHNALDVDRY-LKIAPELYLKRLIVG 242

Query: 209 GFDRYFQIAPCFRDE 223
           G +  F++  CFR+E
Sbjct: 243 GMEAVFEMNRCFRNE 257



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A   GM P  G   G+DR+VMLLL  K++R+V LFP
Sbjct: 454 QALGYGMSPTVGWGLGVDRLVMLLLNKKSIRDVILFP 490


>gi|330796288|ref|XP_003286200.1| hypothetical protein DICPUDRAFT_150147 [Dictyostelium purpureum]
 gi|325083870|gb|EGC37312.1| hypothetical protein DICPUDRAFT_150147 [Dictyostelium purpureum]
          Length = 584

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 87/173 (50%), Gaps = 12/173 (6%)

Query: 92  GQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRII 149
           G++ +  + I IL+     P+P+   ++E    IR++ R LD L      +    R+++I
Sbjct: 201 GELSVIPKDINILTPCNR-PIPLKINDKE----IRYRNRPLDFLVNPENQRAFFIRSKVI 255

Query: 150 NSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSR-VNQGSFYALPQAPQQYKQLLMA 207
           N +R  ++   F+E  TPIL+ +     A+ F+  S  +N   F  +  +P+ + + L+ 
Sbjct: 256 NYVRSFLVERGFLEVDTPILSTNVGGANAKPFITRSNSLNLDLFLRI--SPELFLKQLVV 313

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +GFD+ F++   FR+E       P EF   +   ++ + + I+   E +L G+
Sbjct: 314 AGFDKVFELGKQFRNEGIDLTHNP-EFTTCEFYQAYADYETIVKLTEEMLSGM 365


>gi|229496474|ref|ZP_04390189.1| asparaginyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316614|gb|EEN82532.1| asparaginyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 465

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 105/259 (40%), Gaps = 31/259 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG-LV 77
           + + GWV   R +  + F+ + D   I   Q+VA+      E+ + + +   L + G LV
Sbjct: 19  ITVMGWVRTRRGNKAVSFIALNDGSCIHNLQIVADLARFSPEVMQQITTGASLAVRGTLV 78

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            S+ A         GQ +EL A++I I    +    P+  +    E +R    +L  R +
Sbjct: 79  ASQGA---------GQSVELQAEEITIFGTCDPNSYPLQKKGHSLEFLR-DIAYLRPRTN 128

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--------- 187
           T    +  R  +  ++      + +    TPI+T+S  EGA      + +N         
Sbjct: 129 TFGAILRIRHNMAIAIHEFFHKKGYYYVHTPIITSSDAEGAGQMFRVTTLNLDKLPLNKA 188

Query: 188 -----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                +  F+  P A     QL   L A      +   P FR E+  + R   EF+ ++ 
Sbjct: 189 GEVDYKKDFFGKPTALTVSGQLEGELAALALGGIYTFGPTFRAENSNTPRHLAEFWMIEP 248

Query: 240 EMSFVEQDDILNTMENVLR 258
           E++F +  D ++  E   +
Sbjct: 249 EIAFFDVHDNMDLAEEFTK 267


>gi|213647141|ref|ZP_03377194.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 284

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 109/276 (39%), Gaps = 54/276 (19%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V + GWV   R    GI FL + D             +CF+  ++V +  +   +  V+ 
Sbjct: 20  VTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNEEVLH 67

Query: 80  RSAETINANIITGQI----------ELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
            +  T  + ++TG++          E+ A K+E+    E+    P+  +R    SI +  
Sbjct: 68  LT--TGCSVVVTGKVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRH---SIEYLR 122

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   STP++TAS  EGA +     RV
Sbjct: 123 EVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF---RV 179

Query: 187 NQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +      LP+  Q                    Q      A    + +   P FR E+  
Sbjct: 180 STLDLENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 239

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + R   EF+ L+ E++F + +D     E +L+ VF+
Sbjct: 240 TSRHLAEFWMLEPEVAFADLEDNARLAEAMLKYVFK 275


>gi|126641048|ref|YP_001084032.1| lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 428

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 4/137 (2%)

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
            ++++ R+LDL   +   K    R +++  +R  +  E F+E  TP++        AR F
Sbjct: 85  EVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHVIPGGASARPF 144

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                      + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++  
Sbjct: 145 ETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEFY 202

Query: 241 MSFVEQDDILNTMENVL 257
            ++ +  D++   EN+L
Sbjct: 203 QAYADYKDLMALTENML 219



 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 386 ALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFP 421


>gi|332879103|ref|ZP_08446804.1| asparagine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332682903|gb|EGJ55799.1| asparagine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 476

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/262 (20%), Positives = 106/262 (40%), Gaps = 32/262 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV   R +    F+ + D   I   QVV + ++   E+ K + +   + + G V+
Sbjct: 18  ITLKGWVRTFRSNR---FIALNDGSTIENVQVVVDFENTDPELLKRITTGAAIEVKGQVV 74

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
               +        GQ +E+ A  I IL  +     P+  ++   E +R +   L +R +T
Sbjct: 75  ESQGK--------GQAVEVQATTISILGDSNPEEYPIQPKKHSLEFLR-ENAHLRVRSNT 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R+ +  ++        F   +TPI+T S  EGA +    + ++  +       
Sbjct: 126 FSAVMRVRSTLAYAIHKYFQDNGFFYVNTPIITGSDAEGAGEMFRVTTLDAKNPPLTEDG 185

Query: 198 PQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              YK+                    A    + +   P FR E+  + R   EF+ ++ E
Sbjct: 186 KVDYKKDFFGRETNLTVSGQLEGETFAMALGKIYTFGPTFRAENSNTSRHLAEFWMIEPE 245

Query: 241 MSFVEQDDILNTMENVLRGVFE 262
           M+F +  D +N  E+ ++ V +
Sbjct: 246 MAFFDLIDNMNLAEDFIKYVLK 267


>gi|169836741|ref|ZP_02869929.1| lysyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 494

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+VML   + ++R+V LFP
Sbjct: 449 RALEYGMPPAGGLGIGIDRLVMLQTNSASIRDVILFP 485



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 7/170 (4%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRI 148
           TG++ L     E+LS     PLP           R++ R++DL   R+ + + + KR ++
Sbjct: 118 TGELTLRVDSFEVLS-KNVRPLPEKFHGLTNVETRYRQRYVDLVMNREVM-ETMKKRFQV 175

Query: 149 INSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I   R  +  + F E  TP++   +    AR F+          + L  AP+ Y + L+ 
Sbjct: 176 IRFFRSYLEKKGFTEVETPMMHPIAGGATARPFVTHHNALDMELF-LRIAPELYLKRLLV 234

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            GF++ F+I   FR+E       P EF  +++  ++ + +D+++  E+++
Sbjct: 235 GGFEKVFEINRSFRNEGISVKHNP-EFTMMELYQAYADFNDMMDLTEDLI 283


>gi|221194541|ref|ZP_03567598.1| lysyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185445|gb|EEE17835.1| lysyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 522

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 16/206 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           ++G V  +R  G I F+ I D+ G  Q+   + N D A +++   +    ++   G VM 
Sbjct: 77  VAGRVRAIRNQGKIAFVVIEDYTGQLQLFCRINNLDEASWDLLGMLDLGDIIGATGAVMR 136

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                       GQ+ ++  ++ +LS +   PLP          +R++ R++DL  +   
Sbjct: 137 TR---------RGQLSIAPTRLVLLSKSLR-PLPEKFHGLTDREVRYRQRYVDLIMNPEV 186

Query: 140 KNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
           +++  KR++II+ +R  M  + ++E  TP+L        A+ F+          Y L  A
Sbjct: 187 RDVFRKRSQIISIIRQHMEDDGYMEVETPVLQEILGGANAKPFITHYNALNTENY-LRIA 245

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDE 223
            +   + L+  G +R F+I   FR+E
Sbjct: 246 TELPLKRLIVGGLERVFEIGRQFRNE 271



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GGI  GIDR++ML     ++R+V LFP
Sbjct: 472 RALEYGMPPAGGIGYGIDRMIMLFCDQPSIRDVLLFP 508


>gi|311280156|ref|YP_003942387.1| asparaginyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308749351|gb|ADO49103.1| asparaginyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 466

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 108/277 (38%), Gaps = 48/277 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    G  FL I D             +CF+  ++V +  +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGFSFLAIYD------------GSCFDPVQAVINNSLPNYNQ 63

Query: 76  LVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFK 127
            V+  +  T  + I+TG+I  S    Q  E+ + + E+   V     YP      SI + 
Sbjct: 64  EVLRLT--TGCSVIVTGKIVASQGQGQAYELQATSVEVTGWVDDPDTYPMAAKRHSIEYL 121

Query: 128 YRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
                LR  T     V R R  +  ++      + F   STP++TAS  EGA +     R
Sbjct: 122 REVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF---R 178

Query: 186 VNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDP 225
           V+      LP+  Q                    Q      A    + +   P FR E+ 
Sbjct: 179 VSTLDLENLPRNDQGKVDFDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENS 238

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            + R   EF+ L+ E++F + +D     E +L+ VF+
Sbjct: 239 NTSRHLAEFWMLEPEVAFADLEDNARLAEAMLKYVFK 275



 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDY-----AWYRDLRRYGTVPHAGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|257063195|ref|YP_003142867.1| asparaginyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256790848|gb|ACV21518.1| asparaginyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 467

 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/313 (21%), Positives = 119/313 (38%), Gaps = 68/313 (21%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++GWV  +R      F+ + D             +CF+  + V     L    ++ ++
Sbjct: 21  VTVAGWVRSIRDMKNFGFVTLND------------GSCFKDLQVVMDRESLPEYDVIAAQ 68

Query: 81  SAETINANIITGQI----------ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
                 A I+TG +          EL A  I++   + E   P+  +R   E +R     
Sbjct: 69  GVSA--ALIVTGTVVLTPDAKQPFELKAANIQVEGESRE-DYPLQKKRHTNEFLR---TI 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQ 188
             LR  T     V R R + +       +   F+  +TPI+TAS  EGA +    + ++ 
Sbjct: 123 QHLRPRTNLFRAVFRVRSVAAYALHEFFQERGFVYVNTPIITASDAEGAGEMFRVTTIDP 182

Query: 189 GSFYALPQAPQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLP 231
            +     +    Y Q                    A  F   +   P FR ED  + R  
Sbjct: 183 ANPPLDDKGNVDYSQDFFGKATNLTVSGQLQAESFAMAFGDVYTFGPTFRAEDSNTARHA 242

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSNGNTV------- 270
            EF+ ++ E++F + DD +N  E++L+ V              F  F +   +       
Sbjct: 243 AEFWMVEPEIAFADLDDDMNLAEDMLKHVINTVLEKCPDEMNMFNSFVDKGLIERLQHVA 302

Query: 271 SNNFLRICYDDAI 283
           +++F+R+ Y +A+
Sbjct: 303 NSDFIRVTYTEAV 315


>gi|330723807|gb|AEC46177.1| Lysyl-tRNA synthetase 1 [Mycoplasma hyorhinis MCLD]
          Length = 492

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 7/181 (3%)

Query: 91  TGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRI 148
           T ++ L   K+++L+ A + LP    G  +  E  +++ R+LDL  +   K +   RT+I
Sbjct: 121 TNELSLKVNKLQLLTKALKPLPDKFHGINDVDE--KYRKRYLDLISNPETKQVFFTRTKI 178

Query: 149 INSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I+ +R  +   N++E +TPIL +  +   AR F         +FY         K+LL+ 
Sbjct: 179 ISLIRQFLDNLNYMEVTTPILQSLLTGASARPFTTFYNSLHANFYLRIATELPLKKLLVG 238

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            G DR ++I   FR+E   +   P EF  ++   ++   + ++   E + + + ++ +  
Sbjct: 239 -GLDRVYEIGKIFRNEGVDTTHNP-EFTSIEFYEAYANLETMMERTEAIFKFLVDKLNIK 296

Query: 268 N 268
           N
Sbjct: 297 N 297



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + GMPP GG   GIDR+VMLL    ++REV LFP
Sbjct: 451 SLKYGMPPAGGCGIGIDRLVMLLTSKTSIREVILFP 486


>gi|207111352|ref|ZP_03245514.1| aspartyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 42

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 28/39 (71%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRD 43
          R+H C ++   DVG  ++++GW +  R HGG++F+D+RD
Sbjct: 2  RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRD 40


>gi|310794842|gb|EFQ30303.1| lysyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 620

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 12/264 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPD-----SACFEIAK-SV 65
           G  D    VR+   ++  R  G  + F DIR      QV+A        S  FE     +
Sbjct: 128 GEHDKEKVVRVGARIYNKRASGNKLFFYDIRAEGVKVQVMAQAQEVREGSPSFEDQHIHL 187

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESI 124
           R   ++ I G     + ++       G++ + A +  +L+     LP   +G +++ E  
Sbjct: 188 RRGDIVGIIGYPGRTAPKSKIEKGEEGELSIFATEFVLLTPCLHTLPDEYYGFKDHEE-- 245

Query: 125 RFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           R + R+LDL   D   + ++ R+++I  +R      +FIE  TP++   +        V 
Sbjct: 246 RHRKRYLDLIMNDKSRQILITRSKMITYIRRFFDNRDFIEVETPMMGPIAGGATAAPFVT 305

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              +      +  AP+ Y + L+  G  R ++I   FR+E       P EF   +   +F
Sbjct: 306 HHNDLDMTMFMRIAPELYLKELVVGGLHRVYEIGRQFRNEGIDLTHNP-EFTTCEFYQAF 364

Query: 244 VEQDDILNTMENVLRGVFEEFSNG 267
            +  DI++  E ++ G+ +  + G
Sbjct: 365 ADVYDIMDLTEELVSGLVKHLTGG 388



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    ++REV  FP
Sbjct: 554 SLEYGLPPTGGWGMGIDRMVMFLTDNYSIREVLAFP 589


>gi|227538436|ref|ZP_03968485.1| asparagine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241718|gb|EEI91733.1| asparagine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 481

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 109/272 (40%), Gaps = 38/272 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-----NPDSACFEIAKSVR 66
           L  ++ G  V + GWV   R +    F+ I D   I  + A     N D A     K + 
Sbjct: 10  LNATEFGQEVIVKGWVRTFRNNQ---FIAINDGSSINNIQAVVDFENTDDALL---KRIT 63

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           +   + + G        T+  ++  GQ +E+   +++++  ++    P+  ++   E +R
Sbjct: 64  TGAAVRVKG--------TLIESLGKGQKVEVKVTELDVIGDSDPEKFPLQPKKHSLEFLR 115

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-------- 177
            +   L  R  T +     R  +  ++       +F+   TPI+T S  EGA        
Sbjct: 116 -EIAHLRFRTGTFNAIFKVRNALSFAVHRFFNERDFVYMHTPIITGSDAEGAGEMFRVTT 174

Query: 178 RDFLVPSRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSD 228
            D   P R   G       F+          QL   L A  F   +   P FR E+  + 
Sbjct: 175 LDLNNPPRTENGEIDFKEDFFGKSTNLTVSGQLEGELAALAFGNIYTFGPTFRAENSNTT 234

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           R   EF+ ++ EM+F E +D ++  E +L+ V
Sbjct: 235 RHLAEFWMIEPEMAFYELEDNMDLAEALLKYV 266



 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 20/113 (17%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEV 517
           F M Q   ++L  N + ++     D++  G  E+  G  R    + +L   + VGI  E 
Sbjct: 377 FYMKQNEPDTLGRNTVRAM-----DILFPGIGEMVGGSQREENLDKLLARMAEVGIPAEE 431

Query: 518 VE-----NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           +E      RFG +         PH G   G +R+V+ + G  N+R+V  FP +
Sbjct: 432 MEWFLDTRRFGSV---------PHSGFGVGFERLVLFVTGMTNIRDVIPFPRT 475


>gi|294674370|ref|YP_003574986.1| lysine--tRNA ligase [Prevotella ruminicola 23]
 gi|294474187|gb|ADE83576.1| lysine--tRNA ligase [Prevotella ruminicola 23]
          Length = 575

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 109/236 (46%), Gaps = 20/236 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--LCIDGLVM 78
           V ++G +   R  G   F +++D  G  QV    D  C    K + +     L   G  +
Sbjct: 54  VVIAGRMMSRRVMGKASFAELQDSKGRIQVYITRDDICPGENKDLYNNVFKRLLDIGDFI 113

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRF 130
               +       TG+I + A ++ +LS + + PLP+        + + + PE +R++ R+
Sbjct: 114 GVKGKVFRTQ--TGEISVHASELTLLSKSLK-PLPIVKYKDGVAYDKFDDPE-LRYRQRY 169

Query: 131 LDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVN 187
           +DL   + +    +KR  II +MR  +    + E  TPIL + +    AR F+   + +N
Sbjct: 170 VDLVVNEGVKDTFLKRATIIRTMRSILDNAGYTEVDTPILQSIAGGASARPFITHFNALN 229

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           Q  +  +  A + Y + L+  GF+  +++   FR+E       P EF  +++ +S+
Sbjct: 230 QDMYMRI--ATELYLKRLIVGGFEGVYEMGKNFRNEGMDKTHNP-EFTCMELYVSY 282



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   + EV LFP
Sbjct: 459 RALQYGMPPTFGIGIGIDRLVMLMTGKFAIGEVMLFP 495


>gi|212635434|ref|YP_002311959.1| asparaginyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|212556918|gb|ACJ29372.1| Asparaginyl-tRNA synthetase, class IIb [Shewanella piezotolerans
           WP3]
          Length = 466

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 109/280 (38%), Gaps = 54/280 (19%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           +GS + + GWV   R    GI FL I D             +CF+  + V    +   D 
Sbjct: 16  IGSQITVRGWVRSRRDSKAGISFLAIYD------------GSCFDPIQGVVPNNLENYDN 63

Query: 76  LVMSRSAETINANIITGQI----------ELSAQKIEILSVAEEL-PLPVFGEREYPESI 124
            V+  +A    + I+TG++          E+    +E+    E+    P+  +R   E +
Sbjct: 64  EVLKLTAGC--SVIMTGEVVESPGKGQAFEMQVTNVEVAGWVEDPDTYPMAAKRHSIEHL 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           R       LR  T     V R R  +  ++      + +I  STP++TAS  EGA +   
Sbjct: 122 R---ELAHLRPRTNIIGAVARVRNCLSQAIHRFYNEQGYIWVSTPLITASDTEGAGEMF- 177

Query: 183 PSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRD 222
             RV+      LP+  +                    Q      A    + +   P FR 
Sbjct: 178 --RVSTLDLENLPRDDKGAVDYSEDFFGKESFLTVSGQLNAETYACALSKVYTFGPTFRA 235

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           E+  + R   EF+ ++ E+++ + DD     E++L+  F+
Sbjct: 236 ENSNTSRHLAEFWMVEPEVAYADLDDAAKLAEDMLKYCFK 275


>gi|16330075|ref|NP_440803.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501021|sp|P73443|SYK_SYNY3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1652562|dbj|BAA17483.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 510

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+ +N
Sbjct: 464 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLKN 503



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 117/266 (43%), Gaps = 28/266 (10%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-------- 55
           YR  S G+    +V   V ++G +   R  G + F  ++D  G  Q+             
Sbjct: 49  YRDLSNGE----EVDLKVAIAGRILARRVMGKLAFFTLQDESGTIQLYLEKQRLTEHMPE 104

Query: 56  -SACFEIAKSVRSEW-VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
               F + K +     +L + G  + R+ +        G++ +  Q   +L+ +  LPLP
Sbjct: 105 LENAFNLLKKITDVGDILGVTG-TLKRTEK--------GELSVYVQTYAVLTKSL-LPLP 154

Query: 114 VFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                      R++ R++DL  + T+ +   +R +I  ++R  +  + FIE  TP+L   
Sbjct: 155 DKWHGLTDTEKRYRQRYVDLIVNPTVRQTFRRRAQITAAIRRYLDKQGFIEIETPVLQGE 214

Query: 173 SPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           S    AR F+          Y L  A + + + L+  GF++ F++   FR+E   +   P
Sbjct: 215 SGGAEARPFITHHNTLGMPLY-LRIATELHLKRLVVGGFEKVFELGRIFRNEGVSTRHNP 273

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVL 257
            EF  +++  ++V+ ++++   E ++
Sbjct: 274 -EFTSIEVYQAYVDYNEMMALTEALV 298


>gi|328478117|gb|EGF47979.1| lysyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 114

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 75  ALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 110


>gi|238754326|ref|ZP_04615682.1| Asparaginyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238707359|gb|EEP99720.1| Asparaginyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 466

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 109/278 (39%), Gaps = 42/278 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV------- 65
           G + V S V + GWV R R          RD       VA  D +CF+  ++V       
Sbjct: 12  GRAAVDSEVTVRGWV-RTR----------RDSKAGISFVAVYDGSCFDPLQAVINNTLPN 60

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILS-VAEELPLPVFGEREYPES 123
             + VL +          T+ A+   GQ  E+ A ++ ++  V +    P+  +R    S
Sbjct: 61  YQDEVLHLTTGCSVEITGTVVASPGEGQSFEIQATRVNVVGWVDDPDTYPMAAKRH---S 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181
           I +      LR  T     V R R  +     R   EN +   STP++TAS  EGA +  
Sbjct: 118 IEYLREVAHLRPRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLITASDTEGAGEMF 177

Query: 182 VPS--------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             S        R + G       F+   A      Q      A    + +   P FR E+
Sbjct: 178 RVSTLDLENLPRTDAGKIDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             + R   EF+ ++ E++F   DD+    E +L+ VF+
Sbjct: 238 SNTSRHLAEFWMIEPEVAFASLDDVAALAEKMLKYVFQ 275



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+ Q  + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDQRLAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|82915420|ref|XP_729064.1| lysyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23485895|gb|EAA20629.1| lysyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 579

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 13/210 (6%)

Query: 19  SFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           + + ++G + RV   G  + F D+       QV+AN     +      +S +V C D + 
Sbjct: 127 TILNMTGRIMRVSSSGQKLRFFDLVGDGKRIQVLAN-----YSFHDKEKSNFVECYDKIK 181

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELP-LPV-FGEREYPESIRFKYRFLDLRR 135
                  I     + + ELS    E + ++  L  LP+ +G ++    IR++ R+LDL  
Sbjct: 182 RGDIVGIIGFPGKSKKGELSIFPKETIVLSPCLHMLPMKYGLKD--TEIRYRQRYLDLLI 239

Query: 136 DTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYA 193
           +   +N+ + RT+IIN +R  +  + FIE  TP +   +    AR F+          Y 
Sbjct: 240 NESTRNVFITRTKIINFLRNFLNNQGFIEVETPSMNLMAGGASARPFITHHNDLDLDLY- 298

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           L  A +   ++L+  G DR ++I   FR+E
Sbjct: 299 LRIATELPLKMLIVGGLDRVYEIGKVFRNE 328



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG+  GIDRI M L    ++++V LFP
Sbjct: 538 SLEYGLPPTGGLGLGIDRITMFLTNKNSIKDVILFP 573


>gi|325297359|ref|YP_004257276.1| Lysyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324316912|gb|ADY34803.1| Lysyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 576

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 118/269 (43%), Gaps = 23/269 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV    D  C +  K + +     +  L    
Sbjct: 56  VSVAGRMMSRRVMGKASFIELQDSKGRIQVYITRDDICPDENKDLYNVAFKRLLDLGDFI 115

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYRFLD 132
             E        G+I + AQK+ +L+ +   PLP+        + + E PE +R++ R++D
Sbjct: 116 GIEGFVFRTQMGEISIHAQKLTVLAKSLR-PLPIVKYKDGVAYDKFEDPE-LRYRQRYVD 173

Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGS 190
           L  +   K+I ++R  +I ++R  +    + E  TP L   +    A+ F+         
Sbjct: 174 LIVNDGVKDIFLQRATVIRTIRRVLDEAGYTEVETPTLQNIAGGASAKPFITHFNALDTD 233

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG--------EFYQLDMEMS 242
            Y L  A + Y + L+  GF+  ++I   FR+E    +  P         ++   +  M+
Sbjct: 234 MY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRNHNPEFTCMELYVQYKDYNWMMA 292

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           F E+  +L T+   + G  E   +GN +S
Sbjct: 293 FTEK--LLETVCIAVNGKPEREIDGNIIS 319



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP
Sbjct: 461 RALQYGMPPTSGIGIGIDRLVMLMTGKTFIQEVLFFP 497


>gi|302656134|ref|XP_003019823.1| hypothetical protein TRV_06111 [Trichophyton verrucosum HKI 0517]
 gi|291183595|gb|EFE39199.1| hypothetical protein TRV_06111 [Trichophyton verrucosum HKI 0517]
          Length = 563

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R + ++ + +A    G+  E  +  F     AF+ G  PH G   
Sbjct: 476 YDFFMRGEEIMSGAQRINDAKELEEAMVARGV--EPNQEGFEDYINAFRQGCAPHAGGGL 533

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV   LG  N+R  +LFP
Sbjct: 534 GLNRIVQFFLGLPNIRLATLFP 555



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 32/196 (16%)

Query: 94  IELSAQKIEILSVA-EELPLPVF-GEREYPESI-----------------RFKYRFLDLR 134
           +EL   KI ++S A   LP+ V   ER  PES                  R   R LDL+
Sbjct: 182 MELHITKIYMISEAIPMLPMQVKDAERPPPESTEEGLVDTDGTPLVTLKTRLDNRILDLQ 241

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECS-----TPILTASSPEGARDFLVPSRVNQG 189
            +T    +      I+S   ++ +E  ++       T  +T ++ EG       S   + 
Sbjct: 242 TETSQAIMA-----ISSGVAQLFSEYMLKSGSRWIFTSKITGAATEGGSGVFEISYFKRK 296

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
           ++  L Q+PQ  KQ+ +A      F+I P FR ED  + R   EF  LD E +F +   +
Sbjct: 297 AY--LSQSPQLGKQMCIAGDMMSVFEIGPVFRAEDSNTHRHLTEFIGLDFERTFQKHYHE 354

Query: 249 ILNTMENVLRGVFEEF 264
           +L+  EN+L  +  E 
Sbjct: 355 VLDFAENLLVFILSEL 370


>gi|242003295|ref|XP_002422684.1| asparaginyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212505506|gb|EEB09946.1| asparaginyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 469

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 108/268 (40%), Gaps = 57/268 (21%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCID 74
           VG +  + GW+  VR   G +F+D+ D   +   QVV   +S   ++       W   I+
Sbjct: 38  VGVYKIIKGWIKSVRKLKGFLFIDVTDGSCFDKIQVVIPKNSNPKKVG------WGASIN 91

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            L        IN    +G +EL A+ I +  +  +       E  YP S   K  F D  
Sbjct: 92  AL----GKLQINP---SGNLELMAESISVEGICNK-------ESNYPFSSSQKQPF-DHY 136

Query: 135 RDTLHKNIVKRTRIINSM-RCRMIA----------ENFIECSTPILTASSPEGARDFLVP 183
           R  ++  +  + R  NS+ R R  A            FI   TPI+T++  EG  +    
Sbjct: 137 RQYIY--LRPQLRYFNSLFRLRHSATLGFHQYFDKNGFIGIHTPIITSNDCEGGGEVFSA 194

Query: 184 SRVNQGSFYALPQAPQQYKQ------------LLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                 +FY   ++P + K             LL  SG      +    R E+ RS    
Sbjct: 195 E-----TFYKNNESPMKEKSETNNQFFFDTPALLTVSG---QLHLEAVTRAENSRSRLHL 246

Query: 232 GEFYQLDMEMSFVEQ-DDILNTMENVLR 258
            EFY ++ E +FV+  + IL  MEN ++
Sbjct: 247 SEFYMIEAEEAFVKDINVILERMENCIK 274


>gi|327308714|ref|XP_003239048.1| aspartyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326459304|gb|EGD84757.1| aspartyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 563

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R + ++ + +A    G+  E  +  F     AF+ G  PH G   
Sbjct: 476 YDFFMRGEEIMSGAQRINDAKELEEAMVARGV--EPNQEGFEDYINAFRQGCAPHAGGGL 533

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV   LG  N+R  +LFP
Sbjct: 534 GLNRIVQFFLGLPNIRLATLFP 555



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 32/196 (16%)

Query: 94  IELSAQKIEILSVA-EELPLPVF-GEREYPESI-----------------RFKYRFLDLR 134
           +EL   KI ++S A   LP+ V   ER  PES                  R   R LDL+
Sbjct: 182 MELHITKIYMISEAIPMLPMQVKDAERPPPESTEEGLVDTDGTPIVTLKTRLDNRILDLQ 241

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECS-----TPILTASSPEGARDFLVPSRVNQG 189
            +T    +      I+S   ++ +E  ++       T  +T ++ EG       S   + 
Sbjct: 242 TETSQAIMA-----ISSGVAQLFSEYMLKSGSRWIFTSKITGAATEGGSGVFEISYFKRK 296

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
           ++  L Q+PQ  KQ+ +A      F+I P FR ED  + R   EF  LD E +F +   +
Sbjct: 297 AY--LSQSPQLGKQMCIAGDMMSVFEIGPVFRAEDSNTHRHLTEFIGLDFERTFQKHYHE 354

Query: 249 ILNTMENVLRGVFEEF 264
           +L+  EN+L  +  E 
Sbjct: 355 VLDFAENLLVFILSEL 370


>gi|259485979|tpe|CBF83457.1| TPA: asparaginyl-tRNA synthetase Slm5, putative (AFU_orthologue;
           AFUA_3G09630) [Aspergillus nidulans FGSC A4]
          Length = 537

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 106/266 (39%), Gaps = 49/266 (18%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE----WVLCID 74
           +RL G+V  VR      F +I D   +   Q +  P  A  E++     E    W  C  
Sbjct: 49  IRLHGFVRSVRKQKRFAFAEISDGTAVEGIQAILKPAQAA-ELSTGTAIEISGIWKACPP 107

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G   S               EL A  + I+  AE    P+  +   PE +R       LR
Sbjct: 108 GKEQSH--------------ELQATSVNIVGAAEPETYPIQKKYHSPEFLR---HIPHLR 150

Query: 135 RDTLHKNIVKRTR------IINSMRCRMIAEN--FIECSTPILTASSPEGA--------R 178
             T    ++ R R      + N  R    A N  F++   P++T+S  EGA        R
Sbjct: 151 FRTPLNALLARFRSECLYQLGNVFRG---APNGGFVQVHPPVITSSDCEGAGETFAVIPR 207

Query: 179 DFLVPS--RVNQGSFYALPQAPQQYKQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           + L+    +     F+  P+      QL +   A+     + ++P FR E   + R   E
Sbjct: 208 ETLIKGLPKEEHDHFFRAPKYLNVSSQLHLEAYAAELGNVWTLSPMFRAEKSDTPRHLSE 267

Query: 234 FYQLDMEMSFVEQDDIL-NTMENVLR 258
           FY L+ E++F+   D L +T+E +LR
Sbjct: 268 FYMLEAEVNFLSDLDALTDTVEYLLR 293


>gi|28898667|ref|NP_798272.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839735|ref|ZP_01992402.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|260364898|ref|ZP_05777469.1| asparagine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260879702|ref|ZP_05892057.1| asparagine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260898825|ref|ZP_05907266.1| asparagine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260900795|ref|ZP_05909190.1| asparagine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|31340435|sp|Q87NH5|SYN_VIBPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|28806885|dbj|BAC60156.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746747|gb|EDM57735.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|308086657|gb|EFO36352.1| asparagine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308093426|gb|EFO43121.1| asparagine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308106846|gb|EFO44386.1| asparagine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308111577|gb|EFO49117.1| asparagine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328474766|gb|EGF45571.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 466

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 107/275 (38%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V         +
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYDN 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKIVESPAQGQDFELAATDVKVVGWVEDAETYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y +        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMENLPRTDAGKVDYNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F E DD+    E++L+ VF+
Sbjct: 241 SRHLAEFWMVEPEVAFAELDDVAKLAEDMLKYVFK 275


>gi|218437352|ref|YP_002375681.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218170080|gb|ACK68813.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 573

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 111/249 (44%), Gaps = 24/249 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYG----------ITQVVANPDSACFEIAKSVRSEWV 70
           V ++G +   R  G + F +++D  G          I+Q +A+  +A   + K   +  +
Sbjct: 68  VSIAGRIIARRVFGKLAFFNLQDETGTIQLYLEKKRISQTMADVANAFNTVLKLTDTGDI 127

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L   G +              G++ +   +  IL+    LPLP           R++ R+
Sbjct: 128 LGAKGTIKRTEK---------GELSIYVTEYAILTKTL-LPLPDKFHGLTDIEKRYRQRY 177

Query: 131 LDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQ 188
           +DL  +  + +   +R +I  S+R  +  E F+E  TP+L + +    AR F+      +
Sbjct: 178 VDLIINPEVRETFRRRAQITASIRRYLEQEGFLEIETPVLQSEAGGADARPFITYHNTLE 237

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  A + + + L+  GF++ F++   FR+E   +   P EF  +++  ++ +  D
Sbjct: 238 MDLY-LRIATELHLKRLIVGGFEKVFEMGRIFRNEGVSTRHNP-EFTSIEIYQAYADYHD 295

Query: 249 ILNTMENVL 257
           ++   EN++
Sbjct: 296 MMVLTENII 304



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 31/47 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
           A + GMPP GG+  GIDR++MLL  + ++R+V  FP+ ++    L G
Sbjct: 470 ALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVIAFPLLKSQSAALKG 516


>gi|291561911|emb|CBL40716.1| asparaginyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 463

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 101/260 (38%), Gaps = 30/260 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           +++ GW+  +R      F+ + D   +   Q+V +   A F E++K      ++    LV
Sbjct: 21  IQVGGWIRSIRDSKAFGFIVLNDGTSFDTLQIVYHDTMANFAEVSKLNVGASIIVKGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A ++ +   A     P+  +R   E +R     L  R +T
Sbjct: 81  ATPEAKQ--------PFEIQATEVTVEG-ASSADYPLQKKRHTFEYLR-TIPHLRARTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVNQ 188
                  R+ I  ++      + F+   TP++T+S  EGA +           VP   + 
Sbjct: 131 FQAVFRVRSLIAYAIHQYFQEQGFVYVHTPLITSSDCEGAGEMFQVTTLDLDNVPKTEDG 190

Query: 189 GSFYALP--------QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              Y+              Q      A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 191 AVDYSKDFFGKHTSLTVSGQLNAETYAMAFRNVYTFGPTFRAENSNTTRHAAEFWMIEPE 250

Query: 241 MSFVEQDDILNTMENVLRGV 260
           M+F + DD +   E +L+ V
Sbjct: 251 MAFADLDDNMAVAEGMLKYV 270



 Score = 41.2 bits (95), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E +L   + +G+  E     +G      + G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDYEKLLARMNELGLKPE----DYGFYLDLRKYGSVRHSGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMGNIRDVVPFPRTVNNCEL 463


>gi|296814996|ref|XP_002847835.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238840860|gb|EEQ30522.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 560

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R + ++ + +A    G+  E  +  F     AF+ G  PH G   
Sbjct: 473 YDFFMRGEEIMSGAQRINDAKELEEAMVARGV--EPNQEGFEDYINAFRQGCSPHAGGGL 530

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV   LG  N+R  +LFP
Sbjct: 531 GLNRIVQFFLGLPNIRLATLFP 552



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 31/195 (15%)

Query: 94  IELSAQKIEILSVA-EELPLPVF-GEREYPESI----------------RFKYRFLDLRR 135
           +EL   K+ ++S A   LP+ V   ER  PES                 R   R LDL+ 
Sbjct: 180 MELHITKVYMISEAIPMLPMQVKDAERPPPESTEEGLVDTDGTLCQFETRLDNRILDLQT 239

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECS-----TPILTASSPEGARDFLVPSRVNQGS 190
           +T    +      I+S   ++ +E  ++       T  +T ++ EG       S   + +
Sbjct: 240 ETSQAIMA-----ISSGVAQLFSEYMLKSGSRWIFTSKITGAATEGGSGVFEISYFKRKA 294

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDI 249
           +  L Q+PQ  KQ+ +A      F+I P FR ED  + R   EF  LD E +F +   ++
Sbjct: 295 Y--LSQSPQLGKQMCIAGDMMSVFEIGPVFRAEDSNTHRHLTEFIGLDFERTFQKHYHEV 352

Query: 250 LNTMENVLRGVFEEF 264
           L+  EN+L  +  E 
Sbjct: 353 LDFAENLLVFILSEL 367


>gi|323450275|gb|EGB06157.1| hypothetical protein AURANDRAFT_1254 [Aureococcus anophagefferens]
          Length = 567

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 10/247 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G   R    G +IF D+       QV+++P S  F   +     W    D L    
Sbjct: 110 VSVAGRAMRKAGQGKLIFYDLHGSGVKIQVMSDPRS--FGAGEEA---WEAINDRLRRGD 164

Query: 81  SAETINANIITGQIELS--AQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
               + +   + + ELS   +++ +LS     LP             RF+ R+LDL  + 
Sbjct: 165 VVGVVGSPGKSKRGELSIFPKELALLSPCLHMLPKGQGASVLKDPDTRFRKRYLDLMVNE 224

Query: 138 LHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
              ++   R+RI++S+R  +    F+E  TP++   +        V      G    +  
Sbjct: 225 GAADVFAIRSRIVSSVRKYLDDRGFLEVETPMMNMVAGGATAKPFVTYFNELGINVFMRV 284

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y +  +  G DR ++I   FR+E       P EF   +  M++ +  D+++  E++
Sbjct: 285 APELYLKTCVVGGLDRVYEIGRQFRNEGMDLTHNP-EFTTCEFYMAYADYHDLMDMTEDM 343

Query: 257 LRGVFEE 263
           +  + ++
Sbjct: 344 ISSLVKD 350



 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L    ++REV LFP
Sbjct: 527 ALEHGLPPTGGWGCGIDRLTMFLSNKNSIREVLLFP 562


>gi|312796707|ref|YP_004029629.1| lysyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312168482|emb|CBW75485.1| Lysyl-tRNA synthetase (EC 6.1.1.6) [Burkholderia rhizoxinica HKI
           454]
          Length = 510

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     +   Y RA + GMPP 
Sbjct: 418 RFELFMTGREIANGFSELNDPEDQAARFRQQVAQKDAGDEEAMYYDADYIRALEYGMPPT 477

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 478 GGCGIGIDRLVMLLTDSPSIRDVILFP 504



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 116/284 (40%), Gaps = 22/284 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q    P     +   + + +W L   G +++ 
Sbjct: 70  VSIAGRMMLKRIMGKASFATVQDGTGQIQFFITPADVGADTYDAFK-KWDL---GDIIAA 125

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLH 139
                  N   G++ +    + +LS A   PLP        +  R++ R++DL       
Sbjct: 126 HGVLFRTN--KGELSVRCTGLRLLSKAIR-PLPDKFHGLSDQETRYRQRYVDLIVTPEAR 182

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +    RTR I S+R  M   +F+E  TP+L        A+ F+          + L  AP
Sbjct: 183 QTFQARTRTIASIRHFMTNADFMEVETPMLHPIPGGAAAKPFITHHNALDMQMF-LRIAP 241

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  G +R F+I   FR+E   S R   EF  ++   ++ +   +++  E ++R
Sbjct: 242 ELYLKRLIVGGLNRVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIR 300

Query: 259 GVFEEFSNGNT----------VSNNFLRICYDDAIRRYGTDKPD 292
               + + G T          +   F R+    AI++Y     D
Sbjct: 301 QAALD-ARGTTAVHYQGRELDLGKPFHRLTITGAIQKYAPQYSD 343


>gi|228476210|ref|ZP_04060913.1| lysine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228269695|gb|EEK11194.1| lysine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 496

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 491


>gi|304373317|ref|YP_003856526.1| Lysyl-tRNA synthetase 1 [Mycoplasma hyorhinis HUB-1]
 gi|304309508|gb|ADM21988.1| Lysyl-tRNA synthetase 1 [Mycoplasma hyorhinis HUB-1]
          Length = 492

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 7/181 (3%)

Query: 91  TGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRI 148
           T ++ L   K+++L+ A + LP    G  +  E  +++ R+LDL  +   K +   RT+I
Sbjct: 121 TNELSLKVNKLQLLTKALKPLPDKFHGINDVDE--KYRKRYLDLISNPETKQVFFTRTKI 178

Query: 149 INSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I+ +R  +   N++E +TPIL +  +   AR F         +FY         K+LL+ 
Sbjct: 179 ISLIRQFLDNLNYMEVTTPILQSLLTGASARPFTTFYNSLHANFYLRIATELPLKKLLVG 238

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            G DR ++I   FR+E   +   P EF  ++   ++   + ++   E + + + ++ +  
Sbjct: 239 -GLDRVYEIGKIFRNEGVDTTHNP-EFTSIEFYEAYANLETMMERTEAIFKFLVDKLNIK 296

Query: 268 N 268
           N
Sbjct: 297 N 297



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + GMPP GG   GIDR+VMLL    ++REV LFP
Sbjct: 451 SLKYGMPPAGGCGIGIDRLVMLLTSKTSIREVILFP 486


>gi|126134111|ref|XP_001383580.1| mitochondrial lysine-tRNA synthetase [Scheffersomyces stipitis CBS
           6054]
 gi|126095729|gb|ABN65551.1| mitochondrial lysine-tRNA synthetase [Scheffersomyces stipitis CBS
           6054]
          Length = 531

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 7/129 (5%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFL-----VPSRVNQGSFYALP 195
           I+ ++ II ++R  ++  NF+E +TPIL+ A +   A+ F      + +   + +   L 
Sbjct: 187 ILVKSYIIQAIRSFLLQNNFLEVNTPILSGAGTGANAKPFATVAHSISTTDAKEAAVQLR 246

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ + + L+  GF++ F+I   FR+E   S   P EF   +   SF    +++   EN
Sbjct: 247 VAPELWLKKLVIGGFEKIFEIGSNFRNEGIDSTHNP-EFTSCEFYQSFTSLPELMQMTEN 305

Query: 256 VLRGVFEEF 264
           + + + E+ 
Sbjct: 306 MFKYIHEDL 314


>gi|295673082|ref|XP_002797087.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226282459|gb|EEH38025.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 521

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 110/250 (44%), Gaps = 23/250 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLV 77
           V + G +   R  G  +IFLD+  +    Q++ N     A     +  +  + L   G V
Sbjct: 103 VVICGRIQSARSAGSKLIFLDLVQNGRKVQILCNQRHMDAMGVTPEKFKQFYHLLRRGDV 162

Query: 78  MSRSAETINANIITGQIELSAQKIE----ILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           +S     I     TG+ ELS    E    I     ++PL V  +   P       R + L
Sbjct: 163 LS----VIGNPHRTGRGELSVTVSELPKLITPCLHDIPLRVKEQETSPYD-----RHVQL 213

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
                  +I++ R+ II  +R      +F+E  TPIL AS   GA  R F   +      
Sbjct: 214 LSSPTAVDILRTRSAIIQYIRNFFFNRSFMEVETPIL-ASVAGGAVARPFQTCATEFPER 272

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
             AL  AP+ + + L+  GFD+ F+I P FR+ED   +    EF   +   ++ + + ++
Sbjct: 273 PLALRIAPELWLKRLVVGGFDKVFEIGPSFRNEDNTHN---PEFTTCEFYHAYADLETLI 329

Query: 251 NTMENVLRGV 260
           +T E++L G+
Sbjct: 330 STSESLLTGL 339


>gi|213852475|ref|ZP_03382007.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 466

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 106/273 (38%), Gaps = 48/273 (17%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V + GWV   R    GI FL + D             +CF+  ++V +  +   +  V+ 
Sbjct: 20  VTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNEEVLH 67

Query: 80  RSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFKYRFL 131
            +  T  + ++TG++  S    Q  EI +   E+   V     YP      SI +     
Sbjct: 68  LT--TGCSVVVTGKVVASPGQGQSFEIQATKVEVAGWVENPDTYPMAAKRHSIEYLREVA 125

Query: 132 DLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            LR  T     V R R  +  ++      + F   STP++TAS  EGA +     RV+  
Sbjct: 126 HLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF---RVSTL 182

Query: 190 SFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
               LP+  Q                    Q      A    + +   P FR E+  + R
Sbjct: 183 DLENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSR 242

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
              EF+ L+ E++F + +D     E +L+ VF+
Sbjct: 243 HLAEFWMLEPEVAFADLEDNARLAEAMLKYVFK 275



 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|170761787|ref|YP_001785939.1| asparaginyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169408776|gb|ACA57187.1| asparagine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 463

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 120/306 (39%), Gaps = 55/306 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V+++GWV  VR      F+++ D   +   QV+       F+    +     + ++G+V 
Sbjct: 21  VKINGWVRTVRDSKNFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTSVEVEGIVQ 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                T NA       E+ A ++ I   +     P+  +R   E +R       LR  + 
Sbjct: 81  P----TPNAK---QPFEIKATRVSIEGKSS-TDYPLQKKRHTFEYLR---TIAHLRPRSN 129

Query: 139 HKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGARDFL---------VPSRVN 187
             + V R R + +         + F+  +TPI+T S  EGA +           +P +  
Sbjct: 130 AFSAVFRVRSLAAYAVHKFFQEKGFVYTNTPIITGSDCEGAGEMFQLTTMDLNNIP-KTE 188

Query: 188 QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +G       F+  P       QL     A  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 EGKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHASEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNFLRI 277
            EM+F E  D L+  E +++ V              F  F +        N V+++F RI
Sbjct: 249 PEMAFAELTDYLDNAEEMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDNVVNSDFKRI 308

Query: 278 CYDDAI 283
            Y +A+
Sbjct: 309 TYTEAV 314


>gi|68469168|ref|XP_721371.1| hypothetical protein CaO19.6533 [Candida albicans SC5314]
 gi|68470193|ref|XP_720858.1| hypothetical protein CaO19.13886 [Candida albicans SC5314]
 gi|77022726|ref|XP_888807.1| hypothetical protein CaO19_6533 [Candida albicans SC5314]
 gi|46442748|gb|EAL02035.1| hypothetical protein CaO19.13886 [Candida albicans SC5314]
 gi|46443286|gb|EAL02569.1| hypothetical protein CaO19.6533 [Candida albicans SC5314]
 gi|76573620|dbj|BAE44704.1| hypothetical protein [Candida albicans]
          Length = 535

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 11/141 (7%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           I+ ++++I ++R  ++  +F+E  TPIL+   +   A  F+   +   G    L  AP+ 
Sbjct: 217 IIVKSKVIQAIRNFLLDRDFLEVQTPILSGQGTGANATPFVTKFK---GEPVHLRVAPEL 273

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL--- 257
           + + L+  GFD+ F+I   FR+E       P EF   +   ++   D+++   E++    
Sbjct: 274 WLKKLVIGGFDKVFEIGSNFRNEGIDMTHNP-EFATCEFYQAYTSLDELMKMTEDMFGYV 332

Query: 258 ---RGVFEEFSNGNTVSNNFL 275
               GV ++F  GN     FL
Sbjct: 333 FDKLGVTDKFPTGNFPKYEFL 353



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           A + G+PP GG   GIDR+ ML+ GA  + +V  F
Sbjct: 492 AMEYGLPPTGGWGCGIDRLAMLIAGANRIEDVLTF 526


>gi|204929826|ref|ZP_03220847.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204320820|gb|EDZ06021.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 494

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 108/275 (39%), Gaps = 54/275 (19%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V + GWV   R    GI FL + D             +CF+  ++V +  +   +  V+ 
Sbjct: 48  VTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNEEVLH 95

Query: 80  RSAETINANIITGQI----------ELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
            +  T  + ++TG++          E+ A K+E+    E+    P+  +R    SI +  
Sbjct: 96  LT--TGCSVVVTGKVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRH---SIEYLR 150

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   STP++TAS  EGA +     RV
Sbjct: 151 EVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF---RV 207

Query: 187 NQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +      LP+  Q                    Q      A    + +   P FR E+  
Sbjct: 208 STLDLENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 267

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ L+ E++F + +D     E +L+ VF
Sbjct: 268 TSRHLAEFWMLEPEVAFADLEDNARLAEAMLKYVF 302



 Score = 37.4 bits (85), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 409 DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 463

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 464 LGFERLIAYVTGVQNVRDVIPFPRT 488


>gi|239502972|ref|ZP_04662282.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 509

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RD 179
            ++++ R+LDL   +   K    R +++  +R  +  E F+E  TP++    P GA  R 
Sbjct: 166 EVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHVI-PGGASARP 224

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++ 
Sbjct: 225 FETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEF 282

Query: 240 EMSFVEQDDILNTMENVL 257
             ++ +  D++   EN+L
Sbjct: 283 YQAYADYKDLMALTENML 300



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 467 ALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFP 502


>gi|303250422|ref|ZP_07336620.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307252225|ref|ZP_07534122.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307256694|ref|ZP_07538473.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|302650748|gb|EFL80906.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860147|gb|EFM92163.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306864742|gb|EFM96646.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 467

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 116/291 (39%), Gaps = 44/291 (15%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D   +   Q + N D A
Sbjct: 1   MSKFPTVSEILSGKVAVGEEVAVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQSIINNDLA 60

Query: 58  CF--EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLP 113
            +  E+ + + +   + + G V+   AE        GQ +EL A  +E++   E+    P
Sbjct: 61  NYNDEVLR-LTAGCSVIVTGKVVESPAE--------GQAVELHATHVEVVGWVEDPDTYP 111

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTA 171
           +  +R    SI +      LR  T     V R R  +  ++      + F   +TP++TA
Sbjct: 112 MAAKRH---SIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITA 168

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFD 211
           S  EGA +     RV+      LP+  +                    Q      A    
Sbjct: 169 SDTEGAGEMF---RVSTLDLENLPRTEEGKVDFSQDFFGKESFLTVSGQLNGETYACALS 225

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + +   P FR E+  + R   EF+ ++ E +F    D     E++L+ VF+
Sbjct: 226 KVYTFGPTFRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFK 276


>gi|213156802|ref|YP_002318463.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|332853679|ref|ZP_08434909.1| lysine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332870858|ref|ZP_08439503.1| lysine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|213055962|gb|ACJ40864.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|332728503|gb|EGJ59877.1| lysine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332731959|gb|EGJ63237.1| lysine--tRNA ligase [Acinetobacter baumannii 6013113]
          Length = 520

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RD 179
            ++++ R+LDL   +   K    R +++  +R  +  E F+E  TP++    P GA  R 
Sbjct: 177 EVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHVI-PGGASARP 235

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++ 
Sbjct: 236 FETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEF 293

Query: 240 EMSFVEQDDILNTMENVL 257
             ++ +  D++   EN+L
Sbjct: 294 YQAYADYKDLMALTENML 311



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 478 ALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFP 513


>gi|94985238|ref|YP_604602.1| asparaginyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|123079901|sp|Q1IZA1|SYN_DEIGD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|94555519|gb|ABF45433.1| asparaginyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 449

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 120/296 (40%), Gaps = 41/296 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCI 73
           VG  VR++ W+      G + FL +RD  G  Q      +     FE A+ +  E  + +
Sbjct: 16  VGETVRVNAWLTDKSGKGKLQFLKLRDGSGFVQATVFKGDVPEEVFEAARRLSQEQAVRV 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V  R+ E        G +EL+ + + +   A +   P+   +E+       +R L L
Sbjct: 76  TGEV--RADER-----APGGVELAVRDL-VPFAANQAEYPI-TPKEHGIEFLLDHRHLWL 126

Query: 134 RRDTLHKNIVKRTRIINSMRCRMI----AENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           R    H+      R+ + +   ++     E FI    P  T ++ EG  +        + 
Sbjct: 127 R----HRRPWAILRVRDCVERAIVEFFHQEGFIRFDAPFFTPNAAEGTTELFEIDLFGED 182

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L Q  Q + +   A  F + +   P FR E  ++ R   EF+ ++ E++     D 
Sbjct: 183 KAY-LSQTGQLHAE-AGALAFGKVYTFGPTFRAEKSKTRRHLLEFWMVEPEVAPATHQDN 240

Query: 250 LNTMEN----VLRGVFEEFSN-----GNTVSN-------NFLRICYDDA---IRRY 286
           ++  E     ++R V EE +      G  V+        N+ R+ Y +A   IRR+
Sbjct: 241 MDLQERLVSFLVRRVLEECAAELAVLGRDVAKLQPAAEGNYPRVTYTEALDIIRRH 296


>gi|302419457|ref|XP_003007559.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261353210|gb|EEY15638.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 569

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 124/297 (41%), Gaps = 56/297 (18%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRD--HYGITQVVA-NPDSACFE 60
           R H   D+    +G  V++ GW+   R  G  + F+++R+  ++ +  V+A +P+     
Sbjct: 92  RVH-LKDITEEHIGKSVKVRGWIQNSRMQGAKMCFIELREERNWAVQGVLAASPE----- 145

Query: 61  IAKSVRSEWVLCIDGL----------VMSRSAETINANIITGQIELSAQKIEILSVAEE- 109
             K V  + V  + GL          V+ +  + + +  ++   EL   K  IL+   E 
Sbjct: 146 -GKPVSRQMVKWMGGLALESFILVEAVIQKPLDPVKSCKVSN-FELHITKCYILAPGPEA 203

Query: 110 --LPLPVFG------EREYPESIRFKYRF--------LDLRRDTLHKNIVKRTRI--INS 151
             + LPV        E E P     K             L    +HK    +  I  +  
Sbjct: 204 LGMSLPVANRAVSSFEDEDPSVTAAKAEAEKSVEAHGTHLSNPAMHKRAPVQQAIADVRM 263

Query: 152 MRCRMIAE-----NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
            R  + AE     NF++   P L  ++ EG  +        + ++ A  Q+PQ YKQ+ +
Sbjct: 264 ARASVFAEYLDTQNFVQFEPPCLIGAASEGGANVFSMPYFEKTAYLA--QSPQFYKQIEI 321

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD--DILNTMENVLRGVF 261
           A G  R + I P     +  + R   EF  LD+EM  +E+D  +++  +E VL  +F
Sbjct: 322 AGGRKRVYCIGP-----NSNTPRHMTEFTGLDLEME-IEEDYHEVMEMLEKVLLHIF 372


>gi|260555931|ref|ZP_05828151.1| lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260410842|gb|EEX04140.1| lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 520

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RD 179
            ++++ R+LDL   +   K    R +++  +R  +  E F+E  TP++    P GA  R 
Sbjct: 177 EVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHVI-PGGASARP 235

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++ 
Sbjct: 236 FETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEF 293

Query: 240 EMSFVEQDDILNTMENVL 257
             ++ +  D++   EN+L
Sbjct: 294 YQAYADYKDLMALTENML 311



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 478 ALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFP 513


>gi|238685500|sp|A3M3D6|SYK_ACIBT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|193076724|gb|ABO11430.2| lysyl-tRNA-synthase [Acinetobacter baumannii ATCC 17978]
          Length = 509

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RD 179
            ++++ R+LDL   +   K    R +++  +R  +  E F+E  TP++    P GA  R 
Sbjct: 166 EVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHVI-PGGASARP 224

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++ 
Sbjct: 225 FETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEF 282

Query: 240 EMSFVEQDDILNTMENVL 257
             ++ +  D++   EN+L
Sbjct: 283 YQAYADYKDLMALTENML 300



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 467 ALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFP 502


>gi|158338556|ref|YP_001519733.1| lysyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158308797|gb|ABW30414.1| lysyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 517

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/231 (21%), Positives = 106/231 (45%), Gaps = 22/231 (9%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIIN 150
           G++ +  Q   +L+ +  LPLP         + R++ R++DL  + ++ +   +R +I  
Sbjct: 141 GELSVYVQTYTVLTKSL-LPLPDKWHGLTDIAKRYRQRYVDLIVNPSVRETFRRRAQITA 199

Query: 151 SMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
           S+R  +  + FIE  TP+L + +    AR F+      +   Y L  A + + + L+  G
Sbjct: 200 SIRRYLDEQGFIEIETPVLNSEAGGAEARPFITYHNTMEMDLY-LRIATELHLKRLIVGG 258

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
           F++ F++   FR+E   +   P EF  +++  ++ + +D+++  E ++    E       
Sbjct: 259 FEKVFELGRVFRNEGISTRHNP-EFTTIEVYQAYADYNDMMDLTEALICTAAER------ 311

Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEHFVHSEFRVFSKI 317
            S   L++ Y         +  DL +P   + MH+  +     +F  F  +
Sbjct: 312 -SVGSLKVPYQG-------ETIDLTSPWRRVTMHDAVQEKTGLDFTTFETV 354



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+ MLL  A ++R+V  FP+
Sbjct: 471 ALEYGMPPTGGLGIGIDRLAMLLSDAASIRDVIAFPL 507


>gi|314937276|ref|ZP_07844618.1| lysine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654572|gb|EFS18322.1| lysine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 496

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 456 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 491


>gi|281210408|gb|EFA84574.1| leucyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 594

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 120/275 (43%), Gaps = 35/275 (12%)

Query: 2   HRYRTHSCGDL---------GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVV 51
            R  TH+  D          G       V ++G +  VR     + F+DI       Q++
Sbjct: 115 ERQLTHTVADFRKQFESIATGSKQTDINVTVAGRIKSVRISSSKLAFIDIISDGHSLQIM 174

Query: 52  AN------PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105
           A+      P      I  ++R   ++ I+G         I A    G++ +  ++I +L+
Sbjct: 175 ADLKQYEDPTKYSTTIT-TIRKGDIIEING---------IPAKTKVGELSIVPREIVLLT 224

Query: 106 VAEELPLPVFGEREYPESIRFKYRFLD--LRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
                P+P+   R   + +R++ R LD  +    +    + R+R+I+ +R  ++   F+E
Sbjct: 225 PCLR-PIPL---RLMNKEVRYRKRHLDFLVNGSQIRNAFIIRSRMISFLRNYLVERGFLE 280

Query: 164 CSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
             TPIL+ +     A+ F   S       + L  +P+ Y + L+ SGFD+ F+I   FR+
Sbjct: 281 VDTPILSTNVGGANAKPFQTYSNSLDLDMF-LRISPELYLKQLVISGFDKVFEIGKQFRN 339

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           E       P EF   ++  ++ + + ++   E++L
Sbjct: 340 EGIDLTHNP-EFTTCELYQAYGDYNTMIRLTEDLL 373



 Score = 40.4 bits (93), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 26/40 (65%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   A + G+PP GG   GIDR+VML+    ++++V +FP
Sbjct: 541 GYCNAMEYGLPPTGGWGLGIDRLVMLVSNNVSIKDVIMFP 580


>gi|256375052|ref|YP_003098712.1| lysyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255919355|gb|ACU34866.1| lysyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 1094

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 22/251 (8%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS-----EW 69
           S  G  V ++G V  +R  GG+ F  +RD  G  QV+   D+A  E     +S     + 
Sbjct: 651 SRFGQVVAITGRVVALRELGGLCFARVRDWTGEVQVML--DAATTEDLHLWKSGVDLGDH 708

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           V     +V SR  E    +++     ++A+ +         PLP           R + R
Sbjct: 709 VGARGEVVRSRRGEL---SVLVADWAITAKCLH--------PLPDRRAGLADPEARVRKR 757

Query: 130 FLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187
           +LDL  +     +++ R+ ++ ++R  +    ++E  TP+L T      AR F+      
Sbjct: 758 YLDLAVNPDSAAMLRTRSAVVRAVRDFLHDRGYLEVETPMLQTVHGGANARPFVTHINAY 817

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L  +G DR F++   FR+E   +   P EF  L+   ++ +  
Sbjct: 818 DTRMY-LRIAPELYLKRLCVAGVDRVFELNRNFRNEGADATHNP-EFTMLEAYQAYADYR 875

Query: 248 DILNTMENVLR 258
            +L+ +  +++
Sbjct: 876 VMLDLVRELVQ 886



 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 13/93 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           R  +    L+A S    + E+ E+       A +
Sbjct: 999  AERWDLVAFGAEVGTAYSELTDPVEQRRRLEAQSLKAASGDVEAMELDED----FLAALE 1054

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             GM P GG+  G+DR++M+L GA ++R+  LFP
Sbjct: 1055 HGMAPTGGLGLGVDRLLMMLTGA-SIRQTVLFP 1086


>gi|169633913|ref|YP_001707649.1| lysyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|169796805|ref|YP_001714598.1| lysyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|215484283|ref|YP_002326510.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|301345962|ref|ZP_07226703.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301512378|ref|ZP_07237615.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301595787|ref|ZP_07240795.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|226737088|sp|B7GXW0|SYK_ACIB3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238688078|sp|B0V9L5|SYK_ACIBY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238688250|sp|B0VSE0|SYK_ACIBS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|169149732|emb|CAM87623.1| lysyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|169152705|emb|CAP01708.1| lysyl-tRNA synthetase [Acinetobacter baumannii]
 gi|213987992|gb|ACJ58291.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
          Length = 509

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RD 179
            ++++ R+LDL   +   K    R +++  +R  +  E F+E  TP++    P GA  R 
Sbjct: 166 EVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHVI-PGGASARP 224

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++ 
Sbjct: 225 FETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEF 282

Query: 240 EMSFVEQDDILNTMENVL 257
             ++ +  D++   EN+L
Sbjct: 283 YQAYADYKDLMALTENML 300



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 467 ALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFP 502


>gi|326473036|gb|EGD97045.1| asparaginyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326477878|gb|EGE01888.1| asparaginyl-tRNA synthetase Slm5 [Trichophyton equinum CBS 127.97]
          Length = 552

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 21/207 (10%)

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR------I 148
           EL A K+ I+  A+    P+  +   P+ +R   +   LR  T    ++ R +      +
Sbjct: 133 ELQATKVAIVGEADPATYPIQKKFHTPDFLR---QLPHLRLRTPFNALLSRLKSEFIYQV 189

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSR---VNQGS---FYALPQAPQQY 201
               R      NF++   P++T+S  EGA + F +  R     +G    F+  P+     
Sbjct: 190 TEEFRSHRHL-NFVQVQPPLITSSDCEGAGEVFSIKPRDVVTEEGKAIEFFKSPKYLTVS 248

Query: 202 KQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT-MENVL 257
            QL +   A+     + ++P FR E   + R   EFY L++EMS+V+  + L   +E +L
Sbjct: 249 SQLHLEAYAAELGNVWTLSPTFRAEKSDTPRHLSEFYMLEVEMSYVDSLEPLTAFVETLL 308

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIR 284
           R + +   N       F     DD  +
Sbjct: 309 RNMTQRVYNSPVAQELFSLKAADDLTK 335


>gi|184157279|ref|YP_001845618.1| lysyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|332872864|ref|ZP_08440828.1| lysine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|183208873|gb|ACC56271.1| Lysyl-tRNA synthetase (class II) [Acinetobacter baumannii ACICU]
 gi|322507164|gb|ADX02618.1| Lysyl-tRNA synthetase [Acinetobacter baumannii 1656-2]
 gi|323517143|gb|ADX91524.1| lysyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332738875|gb|EGJ69738.1| lysine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 520

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RD 179
            ++++ R+LDL   +   K    R +++  +R  +  E F+E  TP++    P GA  R 
Sbjct: 177 EVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHVI-PGGASARP 235

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++ 
Sbjct: 236 FETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEF 293

Query: 240 EMSFVEQDDILNTMENVL 257
             ++ +  D++   EN+L
Sbjct: 294 YQAYADYKDLMALTENML 311



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 478 ALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFP 513


>gi|260550687|ref|ZP_05824895.1| lysyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260406193|gb|EEW99677.1| lysyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 520

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RD 179
            ++++ R+LDL   +   K    R +++  +R  +  E F+E  TP++    P GA  R 
Sbjct: 177 EVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHVI-PGGASARP 235

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++ 
Sbjct: 236 FETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEF 293

Query: 240 EMSFVEQDDILNTMENVL 257
             ++ +  D++   EN+L
Sbjct: 294 YQAYADYKDLMALTENML 311



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 478 ALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFP 513


>gi|32033728|ref|ZP_00134023.1| COG0017: Aspartyl/asparaginyl-tRNA synthetases [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208155|ref|YP_001053380.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|190149984|ref|YP_001968509.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307263312|ref|ZP_07544930.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|166231655|sp|A3N039|SYN_ACTP2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|259511564|sp|B3H198|SYN_ACTP7 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|126096947|gb|ABN73775.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|189915115|gb|ACE61367.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306871374|gb|EFN03100.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 467

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 116/291 (39%), Gaps = 44/291 (15%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D   +   Q + N D A
Sbjct: 1   MSKFPTVSEILSGKVAVGEEVAVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQSIINNDLA 60

Query: 58  CF--EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLP 113
            +  E+ + + +   + + G V+   AE        GQ +EL A  +E++   E+    P
Sbjct: 61  NYNDEVLR-LTAGCSVIVTGKVVESPAE--------GQAVELHATHVEVVGWVEDPDTYP 111

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTA 171
           +  +R    SI +      LR  T     V R R  +  ++      + F   +TP++TA
Sbjct: 112 MAAKRH---SIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITA 168

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFD 211
           S  EGA +     RV+      LP+  +                    Q      A    
Sbjct: 169 SDTEGAGEMF---RVSTLDLENLPRTEEGKVDFSQDFFGKESFLTVSGQLNGETYACALS 225

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + +   P FR E+  + R   EF+ ++ E +F    D     E++L+ VF+
Sbjct: 226 KVYTFGPTFRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFK 276


>gi|299138524|ref|ZP_07031703.1| lysyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298599770|gb|EFI55929.1| lysyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 596

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA   G+PP GG   GIDR+ MLL G++++R+V LFP+
Sbjct: 537 RALGYGLPPTGGEGIGIDRLTMLLTGSRSIRDVILFPL 574



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 10/134 (7%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF---YALPQAP 198
           VKR  I+ ++R       ++E  TP+L T +    AR F    + +  +     ++  AP
Sbjct: 228 VKRAAILRALRNFFDTRGYLEVETPMLHTIAGGAAARPF----KTHHNALDIPLSMRIAP 283

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GFDR ++I   FR+E   +   P EF  L+   ++    D+++  + ++ 
Sbjct: 284 ELYLKRLVVGGFDRVYEINRNFRNEGVSTQHNP-EFTMLEFYQAYANYHDLMDLTQELIT 342

Query: 259 GVFEEFSNGNTVSN 272
            V +   NG T++N
Sbjct: 343 TVAKGV-NGTTITN 355


>gi|297519739|ref|ZP_06938125.1| lysyl-tRNA synthetase [Escherichia coli OP50]
          Length = 173

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +N  K R++I+
Sbjct: 46  TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQIL 104

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           + +R  M+   F+E  TP++        AR F+          Y L  AP+ Y + L+  
Sbjct: 105 SGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVG 163

Query: 209 GFDRYFQI 216
           GF+R F+I
Sbjct: 164 GFERVFEI 171


>gi|220911109|ref|YP_002486418.1| lysyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219857987|gb|ACL38329.1| lysyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 512

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 118/292 (40%), Gaps = 26/292 (8%)

Query: 5   RTHSCGDL--------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  ++             G  V ++G V  VR  G + F  +++  G T        
Sbjct: 48  RTHSLAEVREKYAHLEADETTGDVVGVTGRVVFVRNTGKLCFATLQE--GGTDGKGTRLQ 105

Query: 57  ACFEIA---KSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           A   +A   +   ++W   +D G  +    E I++    G++ + A+   + S A   PL
Sbjct: 106 AMLSLANVGEEALADWKALVDLGDHVFIKGEVISSR--RGELSVMAESWGMASKALR-PL 162

Query: 113 PVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
           PV    E  E  R + R++DL  RD   + +  R  I  S+R  +    ++E  TPIL  
Sbjct: 163 PVL-HAELNEETRVRQRYVDLMVRDEAREMVYTRAAITRSIRETLFRHRYVEVETPILQL 221

Query: 172 SSPEGARDFLVPSRVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
               GA     P   +  +F     L  A + Y +  +  G DR + +   FR+E   S 
Sbjct: 222 VHG-GA--LARPFETHMNAFDQKMTLRIATELYLKRAVVGGIDRVYDMGRVFRNEGVDST 278

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
             P EF  L+   ++ +Q  +   ++ ++    +    G TV      I  D
Sbjct: 279 HSP-EFTTLECYEAWADQFVMAERIKEIILDAADAVGAGRTVQTEAGEINLD 329



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + G PP GGI  GIDR+VML  GA  +RE  LFP+
Sbjct: 470 RALEYGAPPMGGIGLGIDRLVMLFTGA-GIRETILFPL 506


>gi|323526608|ref|YP_004228761.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323383610|gb|ADX55701.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 508

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 128/306 (41%), Gaps = 28/306 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  +RD  G  Q    P     +   + + +W +    +V +R
Sbjct: 68  VAIAGRMMLKRVMGKASFATVRDGSGQIQFFITPADVGQDTYDAFK-KWDMG--DIVAAR 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL-RRDTL 138
                     T + ELS +  E+  +++ L PLP        + ++++ R++DL      
Sbjct: 125 -----GVLFRTNKGELSVRCTELRLLSKSLRPLPDKFHGLSDQEMKYRQRYVDLIVTPET 179

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            K  V RT+ I+S+R  M    F+E  TP+L        A+ F           + L  A
Sbjct: 180 RKTFVARTKAISSIRKFMADAGFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMF-LRIA 238

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E ++
Sbjct: 239 PELYLKRLVVGGFERVFEINRNFRNEG-VSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLI 297

Query: 258 RGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           R    +     T++           F R+    AI++Y    P   N  +  +    F+ 
Sbjct: 298 RQAAIDALGTATITYQGRELDLAKPFHRLTITQAIQKYA---PQYTNEQLADSA---FLR 351

Query: 309 SEFRVF 314
           +E + F
Sbjct: 352 TELKKF 357



 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G EIA+G    +  E     F      K+  +     +   Y RA + GMPP 
Sbjct: 416 RFELFITGREIANGFSELNDPEDQAARFKKQVDQKDAGDEEAMFYDADYIRALEYGMPPA 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VM+L  + ++R+V LFP
Sbjct: 476 GGCGIGIDRLVMMLTDSPSIRDVILFP 502


>gi|254884797|ref|ZP_05257507.1| asparaginyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|319644141|ref|ZP_07998666.1| asparaginyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|254837590|gb|EET17899.1| asparaginyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|317384263|gb|EFV65234.1| asparaginyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 467

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 111/277 (40%), Gaps = 36/277 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F  E+ 
Sbjct: 6   RTKIVDLLKRRDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLANFDEEML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEE-LPLPVFGEREY 120
           K + +   + ++G         +  +I +GQ  E+ A+ IE+L   +   PL   G    
Sbjct: 66  KQITTGACISVNG--------ELTESIGSGQAAEVQARGIEVLGTCDNTYPLQKKGH--- 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGA- 177
             ++ F      LR  T     V R R  +  ++        F    TPI+TAS  EGA 
Sbjct: 115 --TMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPIITASDCEGAG 172

Query: 178 RDFLVPSR-------------VNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221
           + F V ++             +    F+    +     QL   L A+     +   P FR
Sbjct: 173 QMFQVTTKNLYDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            E+  + R   EF+ ++ E++F +  D ++  E+ ++
Sbjct: 233 AENSNTPRHLAEFWMIEPEVAFNDITDNMDLAEDFIK 269


>gi|256819219|ref|YP_003140498.1| asparaginyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256580802|gb|ACU91937.1| asparaginyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 476

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 105/261 (40%), Gaps = 30/261 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV   R +    F+ + D   I   QVV + ++   E+ K + +   + + G ++
Sbjct: 18  ITLKGWVRTFRSNR---FIALNDGSTIDNLQVVVDFENTDPELLKRITTGAAIEVKGRLV 74

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               +  N       +EL A  I IL  +     P+  ++   E +R +   L +R  T 
Sbjct: 75  ESQGKGQN-------VELQASNISILGDSNPEEYPIQPKKHSLEFLR-ENAHLRVRSSTF 126

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----------- 187
              +  R+ +  ++        F   +TPI+T S  EGA +    + ++           
Sbjct: 127 SAVMRVRSTLAFAIHKYFQDNGFFYVNTPIITGSDAEGAGEMFRVTTLDAKNPPLNENGE 186

Query: 188 ---QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
              +  F+          QL     A    + +   P FR E+  + R   EF+ ++ EM
Sbjct: 187 VDYKKDFFGRETNLTVSGQLEGETFAMALGKIYTFGPTFRAENSNTSRHLAEFWMIEPEM 246

Query: 242 SFVEQDDILNTMENVLRGVFE 262
           +F +  D +N  E+ ++ V +
Sbjct: 247 AFYDLIDNMNLAEDFIKYVLQ 267


>gi|91793313|ref|YP_562964.1| asparaginyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123166104|sp|Q12MT5|SYN_SHEDO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|91715315|gb|ABE55241.1| asparaginyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 466

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 105/278 (37%), Gaps = 42/278 (15%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VGS V + GWV   R    GI FL + D             +CF+  + V    +   D 
Sbjct: 16  VGSQVTVRGWVRTRRDSKAGISFLALYD------------GSCFDPIQGVIPNNLPNYDD 63

Query: 76  LVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFK 127
            V+  +A    + ++TG +  S    Q  E+   A E+   V     YP      SI   
Sbjct: 64  EVLKLTAGC--SLVMTGDVVESPGAGQAFELQVTAVEVTGWVDDPDTYPMAAKRHSIEHL 121

Query: 128 YRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
                LR  T     V R R  +  ++      + FI  STP++TAS  EGA +    S 
Sbjct: 122 RELAHLRPRTNIIGAVARVRNCLSQAIHRFYHEQGFIWVSTPLITASDCEGAGEMFRVST 181

Query: 186 VNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSD 228
           ++  +          Y +        L  SG            + +   P FR E+  + 
Sbjct: 182 LDMENLPRTDAGKVDYDKDFFGKESFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTT 241

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           R   EF+ ++ E++F   DD     E++L+  F    N
Sbjct: 242 RHLAEFWMVEPEVAFATLDDAAKLAEDMLKYAFNAVLN 279


>gi|150004187|ref|YP_001298931.1| asparaginyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|294775217|ref|ZP_06740741.1| asparagine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|166231658|sp|A6L0U5|SYN_BACV8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|149932611|gb|ABR39309.1| asparaginyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|294450922|gb|EFG19398.1| asparagine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 467

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 111/277 (40%), Gaps = 36/277 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F  E+ 
Sbjct: 6   RTKIVDLLKRRDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLANFDEEML 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEE-LPLPVFGEREY 120
           K + +   + ++G         +  +I +GQ  E+ A+ IE+L   +   PL   G    
Sbjct: 66  KQITTGACISVNG--------ELTESIGSGQAAEVQARGIEVLGTCDNTYPLQKKGH--- 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGA- 177
             ++ F      LR  T     V R R  +  ++        F    TPI+TAS  EGA 
Sbjct: 115 --TMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPIITASDCEGAG 172

Query: 178 RDFLVPSR-------------VNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFR 221
           + F V ++             +    F+    +     QL   L A+     +   P FR
Sbjct: 173 QMFQVTTKNLYDLKKDENGAIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            E+  + R   EF+ ++ E++F +  D ++  E+ ++
Sbjct: 233 AENSNTPRHLAEFWMIEPEVAFNDITDNMDLAEDFIK 269


>gi|116515154|ref|YP_802783.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116257008|gb|ABJ90690.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 461

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 104/258 (40%), Gaps = 31/258 (12%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGIT--QVVANPDSACF--EIAKSVRSEWVLCIDG 75
           + ++GW+   R    GI FL I D   I   QV+A      +  EI K      V+    
Sbjct: 20  ITINGWIRSKRTSKIGISFLTITDGSSINTIQVIAKKSLYNYVTEIIKLTTGCSVIISGV 79

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLR 134
           LV+S     I         E+ + KI+++  +      P+  ++   E +R   +F  LR
Sbjct: 80  LVLSPGNLQI--------YEIQSNKIKVIGWIKNPEKYPISAKKHTIEHLR---KFCHLR 128

Query: 135 RDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             T   + + R R  +  S+   +  + ++  STPI+T+   EG+      S ++  + Y
Sbjct: 129 PRTNLISAISRIRNIVFQSLNLFLFNKQYLWVSTPIITSLDTEGSSSMFKVSMLDNNNQY 188

Query: 193 ------------ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                              Q      A    + + + P FR E+  + +   EF+ L++E
Sbjct: 189 TNNNNKKFFKKDVFLTVSGQLTLEAYACALSKVYSLGPIFRAENSNTKKHLTEFWMLEVE 248

Query: 241 MSFVEQDDILNTMENVLR 258
            +F   +DI    E +L+
Sbjct: 249 KAFSNINDISKFAEKLLK 266



 Score = 37.0 bits (84), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G  PH G   G++R+++ + G KN+RE   FP +    D 
Sbjct: 420 KYGTIPHSGFGLGLERLIIFITGIKNIRESIPFPRTIRHADF 461


>gi|325971584|ref|YP_004247775.1| asparaginyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324026822|gb|ADY13581.1| Asparaginyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 462

 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 105/265 (39%), Gaps = 34/265 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE--IAKSVRSEWVLCIDGL 76
           V   GWV   R    + FL++ D   +   QVV + D+   +  ++       V+C   +
Sbjct: 18  VTAEGWVRTKRDSKNVCFLEVNDGSCLKGLQVVIDKDTLADQNILSAITTGCSVICKGPI 77

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V S   +          +E+++  I ++    E P+  +  ++   +I +      LR  
Sbjct: 78  VESAGGDQ--------AVEMASSDITLVG---ECPVDTYPLQKKRHTIEYLREISHLRAR 126

Query: 137 TLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGA-RDFLVPS-------RV 186
           T     V R R   S       +   F   +TPI++AS  EGA   FLV +       + 
Sbjct: 127 TNMFGAVARVRNTLSYAVHQFFQERGFAYVNTPIISASDAEGAGEQFLVTTLDLHNIPKT 186

Query: 187 NQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +G       F+   A      Q +    A      +   P FR E+  + R   EF+ +
Sbjct: 187 EEGKIDYSKDFFGREAFLTVSGQLEGETYAMALKNIYTFGPTFRAENSNTKRHLAEFWMV 246

Query: 238 DMEMSFVEQDDILNTMENVLRGVFE 262
           + EM+F E D  +   E+ L+ +F+
Sbjct: 247 EPEMAFCELDGNMEVAESFLKYLFK 271


>gi|332883057|gb|EGK03341.1| asparaginyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 494

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 29/264 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLC 72
            + G+ V + GWV  +R +  + F+ + D   I   Q+VA+ +       K V +   + 
Sbjct: 45  KEFGATVAVKGWVRTIRGNKYVNFIHLNDGSTIHNLQIVADVEKFGETFFKPVSTGACIH 104

Query: 73  IDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
           + G ++    +        GQ +E+ A  +EI   A+    P+  +    E +R +  +L
Sbjct: 105 VIGKLVESQGK--------GQTMEIQADSVEIYGTADPETYPLQKKGHSLEFLR-EIAYL 155

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVP 183
             R +T       R  +  ++        F    TPI+TAS  EGA         DF   
Sbjct: 156 RPRTNTFGAIFRIRHHMAYAIHKYFNDNGFFYFHTPIVTASDAEGAGSMFQVTTLDFNNV 215

Query: 184 SRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            R ++G       F+          QL   L A      +   P FR E+  + R   EF
Sbjct: 216 PRNDKGQVDYVEDFFGRQTNLTVSGQLEGELGAMALGAIYTFGPTFRAENSNTPRHLAEF 275

Query: 235 YQLDMEMSFVEQDDILNTMENVLR 258
           + ++ E++F +  D ++  E+ L+
Sbjct: 276 WMIEPEVAFYDIHDNMDLAEDFLK 299


>gi|270264987|ref|ZP_06193250.1| lysyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270040921|gb|EFA14022.1| lysyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 325

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 10/93 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAF-------SNVGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G      S    Q F       +  G+ +  ++N    L  A Q 
Sbjct: 233 AERFEVYFKGIELANGFRELTDSREQRQRFDQDNRKRAERGLPQHPIDN---NLLDALQH 289

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMP   G+A G+DR+VML LGA+++ EV  FP+
Sbjct: 290 GMPESSGVALGVDRLVMLALGAESLSEVLAFPV 322


>gi|68071131|ref|XP_677479.1| lysine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56497613|emb|CAH98977.1| lysine--tRNA ligase, putative [Plasmodium berghei]
          Length = 516

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 14/242 (5%)

Query: 19  SFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           + + ++G + RV   G  + F D+       QV+AN     +      +S +V C D + 
Sbjct: 64  TILNITGRIMRVSSSGQKLRFFDLVGDGKRIQVLAN-----YSFHDKEKSNFVECYDKIK 118

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELP-LPV-FGEREYPESIRFKYRFLDLRR 135
                  I     + + ELS    E + ++  L  LP+ +G ++    IR++ R+LDL  
Sbjct: 119 RGDIVGIIGFPGKSKKGELSIFPKETILLSPCLHMLPMKYGLKD--TEIRYRQRYLDLLI 176

Query: 136 DTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYA 193
           +   +N+ + RT+IIN +R  +  + F+E  TP +   +    AR F+          Y 
Sbjct: 177 NESTRNVFITRTKIINFLRNFLNDQGFMEVETPSMNLMAGGASARPFITHHNDLDLDLY- 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  A +   ++L+  G D+ ++I   FR+E   +   P EF   +   ++ +  D++   
Sbjct: 236 LRIATELPLKMLIVGGLDKVYEIGKVFRNEGIDNTHNP-EFTSCEFYWAYADYYDLIKWS 294

Query: 254 EN 255
           EN
Sbjct: 295 EN 296



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG+  GIDRI M L    ++++V LFP
Sbjct: 475 SLEYGLPPTGGLGLGIDRITMFLTNKNSIKDVILFP 510


>gi|331002360|ref|ZP_08325878.1| asparaginyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330410176|gb|EGG89610.1| asparaginyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 463

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 113/304 (37%), Gaps = 51/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDG-LV 77
           + + GWV   R      FL I D  ++   QVV N     F     V     L I G LV
Sbjct: 21  ITIGGWVRSNRDSKTFGFLVISDGSYFEQIQVVYNDTLPDFNKLTKVNVGAALIIKGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A  I+I   +     P+  +R   E +R     L  R +T
Sbjct: 81  ATPDAKQ--------PFEIQATHIDIEGESGS-DYPLQKKRHTLEYLR-TISHLRPRTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV--------PSRVNQG 189
                  R+ I  ++       +F+   TPI+T S  EGA +           P   + G
Sbjct: 131 FQAVFRVRSLIAYAIHKFFQERDFVYVHTPIITGSDAEGAGEMFRVTTFDPANPVLNDDG 190

Query: 190 S------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           S      F+          QL     A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 191 SVDFSKDFFGKETNLTVSGQLNGETFAMAFRNIYTFGPTFRAENSNTTRHAAEFWMIEPE 250

Query: 241 MSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRICY 279
            +F + DD ++  E++L+ +            EF N            N V ++F RI Y
Sbjct: 251 FAFGDLDDNMDLAESMLKYIINYVLENASLEIEFFNQFVDKGLLDRLKNVVESDFGRITY 310

Query: 280 DDAI 283
            +AI
Sbjct: 311 TEAI 314


>gi|291457273|ref|ZP_06596663.1| lysine--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291381108|gb|EFE88626.1| lysine--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 560

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 6/161 (3%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I S A + PLP    ++  E  R +  ++ +  D   +N+V+ R++ +
Sbjct: 182 TGELSVFATEWAIASKALQ-PLPAL-HKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAV 239

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R    A +F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 240 ASLRRTFDAHDFLEVETPMLQTLHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 298

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           G DR F+I   FR+E   +   P EF  ++   ++   D I
Sbjct: 299 GIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYGTYDSI 338



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 468 KWDLYVRGFELATG--YSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 526 PAGGMGMGIDRLLIALTGA-TIRETITFPL 554


>gi|187777691|ref|ZP_02994164.1| hypothetical protein CLOSPO_01283 [Clostridium sporogenes ATCC
           15579]
 gi|187774619|gb|EDU38421.1| hypothetical protein CLOSPO_01283 [Clostridium sporogenes ATCC
           15579]
          Length = 463

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 121/306 (39%), Gaps = 55/306 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V+++GWV  VR      F+++ D   +   QV+       F+    +     + ++G+V 
Sbjct: 21  VKINGWVRTVRDSKNFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTSVEVEGIVQ 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                T NA       E+ A ++ I   +     P+  +R   E +R       LR  + 
Sbjct: 81  P----TPNAK---QPFEIKATRVSIEGKSS-TDYPLQKKRHTFEYLR---TIAHLRPRSN 129

Query: 139 HKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSRVN 187
             + V R R + +       +   F+  +TPI+T S  EGA +           +P +  
Sbjct: 130 AFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDLNNIP-KTE 188

Query: 188 QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +G       F+  P       QL     A  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 EGKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHASEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNFLRI 277
            EM+F E  D L+  E++++ V              F  F +        N ++++F RI
Sbjct: 249 PEMAFAELTDYLDNAEDMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDNVINSDFKRI 308

Query: 278 CYDDAI 283
            Y +A+
Sbjct: 309 TYTEAV 314


>gi|197263554|ref|ZP_03163628.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197241809|gb|EDY24429.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
          Length = 466

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 108/275 (39%), Gaps = 54/275 (19%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V + GWV   R    GI FL + D             +CF+  ++V +  +   +  V+ 
Sbjct: 20  VTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNEEVLH 67

Query: 80  RSAETINANIITGQI----------ELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
            +  T  + ++TG++          E+ A K+E+    E+    P+  +R    SI +  
Sbjct: 68  LT--TGCSVVVTGKVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRH---SIEYLR 122

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   STP++TAS  EGA +     RV
Sbjct: 123 EVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF---RV 179

Query: 187 NQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +      LP+  Q                    Q      A    + +   P FR E+  
Sbjct: 180 STLDLENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 239

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ L+ E++F + +D     E +L+ VF
Sbjct: 240 TSRHLAEFWMLEPEVAFADLEDNARLAEAMLKYVF 274



 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|16759869|ref|NP_455486.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142358|ref|NP_805700.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56413951|ref|YP_151026.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|168233422|ref|ZP_02658480.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168237106|ref|ZP_02662164.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168466597|ref|ZP_02700459.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168822065|ref|ZP_02834065.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194470581|ref|ZP_03076565.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194734630|ref|YP_002114055.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197362874|ref|YP_002142511.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198243330|ref|YP_002214926.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205352207|ref|YP_002226008.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856391|ref|YP_002243042.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213162084|ref|ZP_03347794.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213424614|ref|ZP_03357397.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213581037|ref|ZP_03362863.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213612501|ref|ZP_03370327.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|238913227|ref|ZP_04657064.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289823917|ref|ZP_06543517.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|17433736|sp|Q56112|SYN_SALTI RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|81360282|sp|Q5PGF0|SYN_SALPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|25293063|pir||AF0616 asparagine-tRNA ligase (EC 6.1.1.22) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16502162|emb|CAD05400.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137988|gb|AAO69549.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56128208|gb|AAV77714.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|194456945|gb|EDX45784.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194710132|gb|ACF89353.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195631055|gb|EDX49641.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197094351|emb|CAR59863.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197289886|gb|EDY29247.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197937846|gb|ACH75179.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205271988|emb|CAR36832.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205332405|gb|EDZ19169.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205341479|gb|EDZ28243.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|206708194|emb|CAR32487.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|320085243|emb|CBY95028.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|322616430|gb|EFY13339.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322619680|gb|EFY16555.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322622624|gb|EFY19469.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322629773|gb|EFY26548.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632505|gb|EFY29251.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322637000|gb|EFY33703.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641461|gb|EFY38099.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322646073|gb|EFY42589.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649625|gb|EFY46056.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322654074|gb|EFY50397.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322658606|gb|EFY54868.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322663463|gb|EFY59665.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322670199|gb|EFY66339.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322671435|gb|EFY67557.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322676791|gb|EFY72858.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322682715|gb|EFY78734.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686395|gb|EFY82377.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195918|gb|EFZ81085.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323199794|gb|EFZ84883.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202787|gb|EFZ87823.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323209058|gb|EFZ93995.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323209973|gb|EFZ94880.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217982|gb|EGA02697.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323222013|gb|EGA06400.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323226587|gb|EGA10792.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323229783|gb|EGA13906.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233008|gb|EGA17104.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240743|gb|EGA24785.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323243059|gb|EGA27080.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323249778|gb|EGA33680.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252749|gb|EGA36587.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323259163|gb|EGA42807.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323259986|gb|EGA43614.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323268013|gb|EGA51492.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269861|gb|EGA53310.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326622679|gb|EGE29024.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326627252|gb|EGE33595.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 466

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 109/276 (39%), Gaps = 54/276 (19%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V + GWV   R    GI FL + D             +CF+  ++V +  +   +  V+ 
Sbjct: 20  VTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNEEVLH 67

Query: 80  RSAETINANIITGQI----------ELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
            +  T  + ++TG++          E+ A K+E+    E+    P+  +R    SI +  
Sbjct: 68  LT--TGCSVVVTGKVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRH---SIEYLR 122

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   STP++TAS  EGA +     RV
Sbjct: 123 EVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF---RV 179

Query: 187 NQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +      LP+  Q                    Q      A    + +   P FR E+  
Sbjct: 180 STLDLENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 239

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + R   EF+ L+ E++F + +D     E +L+ VF+
Sbjct: 240 TSRHLAEFWMLEPEVAFADLEDNARLAEAMLKYVFK 275



 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|62179527|ref|YP_215944.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224582810|ref|YP_002636608.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|75484225|sp|Q57QZ8|SYN_SALCH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|62127160|gb|AAX64863.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224467337|gb|ACN45167.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322713995|gb|EFZ05566.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 466

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 108/275 (39%), Gaps = 54/275 (19%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V + GWV   R    GI FL + D             +CF+  ++V +  +   +  V+ 
Sbjct: 20  VTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNEEVLH 67

Query: 80  RSAETINANIITGQI----------ELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
            +  T  + ++TG++          E+ A K+E+    E+    P+  +R    SI +  
Sbjct: 68  LT--TGCSVVVTGKVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRH---SIEYLR 122

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   STP++TAS  EGA +     RV
Sbjct: 123 EVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF---RV 179

Query: 187 NQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +      LP+  Q                    Q      A    + +   P FR E+  
Sbjct: 180 STLDLENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 239

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ L+ E++F + +D     E +L+ VF
Sbjct: 240 TSRHLAEFWMLEPEVAFADLEDNARLAEAMLKYVF 274



 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|307261136|ref|ZP_07542813.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306869166|gb|EFN00966.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 467

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 116/291 (39%), Gaps = 44/291 (15%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D   +   Q + N D A
Sbjct: 1   MSKFPTVSEILSGKVAVGEEVAVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQSIINNDLA 60

Query: 58  CF--EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLP 113
            +  E+ + + +   + + G V+   AE        GQ +EL A  +E++   E+    P
Sbjct: 61  NYNDEVLR-LTAGCSVIVTGKVVESPAE--------GQAVELHATHVEVVGWVEDPDTYP 111

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTA 171
           +  +R    SI +      LR  T     V R R  +  ++      + F   +TP++TA
Sbjct: 112 MAAKRH---SIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITA 168

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFD 211
           S  EGA +     RV+      LP+  +                    Q      A    
Sbjct: 169 SDTEGAGEMF---RVSTLDLENLPRTDEGKVDFSQDFFGKESFLTVSGQLNGETYACALS 225

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + +   P FR E+  + R   EF+ ++ E +F    D     E++L+ VF+
Sbjct: 226 KVYTFGPTFRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFK 276


>gi|297625163|ref|YP_003706597.1| lysyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297166343|gb|ADI16054.1| lysyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 494

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+ MLL  A ++R+V LFP+
Sbjct: 454 ALEVGMPPTGGLGLGIDRLAMLLADAPSIRDVILFPL 490



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 19/255 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVR-SEWVLCIDGLVM 78
           V ++G V  +R  G   F  ++D  G  Q     D    +   K +   +W+     L +
Sbjct: 59  VTVAGRVMLLRGMGKATFATLQDASGQIQAYFQKDHLEHYNALKKIDLGDWLEVTGTLFV 118

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDT 137
           ++          TG++ + AQ+   L V    PLP        + +R++ R LDL     
Sbjct: 119 TK----------TGELTVQAQRFRPL-VKSLRPLPDKFHGLADKEVRYRQRHLDLLVSPE 167

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALP 195
           + +  V R+R ++ +R  +    F+E  TP+L  S P GA  R F          F+ L 
Sbjct: 168 VKRAFVLRSRAVSFIRRYLDDLGFLEVETPVLQ-SVPGGAEARPFTTHHNALSHDFH-LR 225

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            + + Y + L+  GFD  ++I   FR+E       P E+  L++  +  + +DIL  +E+
Sbjct: 226 ISLELYLKRLIIGGFDAVYEIGRNFRNEGLSPKHNP-EYTMLELYWAGRDYEDILALVED 284

Query: 256 VLRGVFEEFSNGNTV 270
           +   + E  +    +
Sbjct: 285 MYSRLVETLTGSTKL 299


>gi|307249880|ref|ZP_07531854.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858069|gb|EFM90151.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 467

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 116/291 (39%), Gaps = 44/291 (15%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D   +   Q + N D A
Sbjct: 1   MSKFPTVSEILSGKVAVGEEVAVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQSIINNDLA 60

Query: 58  CF--EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLP 113
            +  E+ + + +   + + G V+   AE        GQ +EL A  +E++   E+    P
Sbjct: 61  NYNDEVLR-LTAGCSVIVTGKVVESPAE--------GQAVELHATHVEVVGWVEDPDTYP 111

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTA 171
           +  +R    SI +      LR  T     V R R  +  ++      + F   +TP++TA
Sbjct: 112 MAAKRH---SIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITA 168

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFD 211
           S  EGA +     RV+      LP+  +                    Q      A    
Sbjct: 169 SDTEGAGEMF---RVSTLDLENLPRTDEGKVDFSQDFFGKESFLTVSGQLNGETYACALS 225

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + +   P FR E+  + R   EF+ ++ E +F    D     E++L+ VF+
Sbjct: 226 KVYTFGPTFRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFK 276


>gi|226330674|ref|ZP_03806192.1| hypothetical protein PROPEN_04594 [Proteus penneri ATCC 35198]
 gi|225201469|gb|EEG83823.1| hypothetical protein PROPEN_04594 [Proteus penneri ATCC 35198]
          Length = 466

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/325 (21%), Positives = 125/325 (38%), Gaps = 53/325 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           VG  V + GWV   R    GI FL + D   +   Q + N +   ++       E +   
Sbjct: 16  VGEDVTVRGWVRTRRDSKAGISFLTVYDGSCFNPVQAIINNNLPNYQ------DEVLHLT 69

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLD 132
            G  +  + + + +       E+ A ++ ++ + ++    P+  +R    SI +      
Sbjct: 70  TGCSVEVTGKIVESPGQGQNFEIHATQVVVVGMVDDPETYPMAAKRH---SIEYLREVAH 126

Query: 133 LRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS------ 184
           LR  T     V R R  +  ++      + F   STP++TA+  EGA +    S      
Sbjct: 127 LRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITAADTEGAGEMFRVSTLDMNN 186

Query: 185 --RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
             R ++G       F+   A      Q      AS   + +   P FR E+  + R   E
Sbjct: 187 LPRTDKGDVDFSEDFFGREAFLTVSGQLNGETYASALSKVYTFGPTFRAENSNTSRHLAE 246

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVF-----------EEFSN----------GNTVSN 272
           F+ ++ E++F + +DI    E +L+  F           E F+            N +++
Sbjct: 247 FWMVEPEVAFADLNDIAALAEKMLKYTFAAVLAERKDDMEFFAQRVDKDAITRLENFITS 306

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPI 297
           +F +I Y DA+           NP+
Sbjct: 307 DFAQIDYTDAVTVLENCGEKFENPV 331



 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 7/91 (7%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    ++  +    +G+SKE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDMFDKRLDEMGMSKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G +R+V  + G  NVREV  FP +    D 
Sbjct: 436 LGFERLVAYVTGVANVREVIPFPRTPRNADF 466


>gi|116747527|ref|YP_844214.1| tRNA synthetase, class II (D, K and N) [Syntrophobacter
           fumaroxidans MPOB]
 gi|116696591|gb|ABK15779.1| tRNA synthetase, class II (D, K and N) [Syntrophobacter
           fumaroxidans MPOB]
          Length = 308

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 10/92 (10%)

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQG 189
           L  +RD L      R+R+I  +R       F+E  TP+LT A +PE     L    V  G
Sbjct: 7   LSAKRDALEL----RSRVIERIRSHFRRAGFLEVQTPLLTPAPAPE-----LNIEAVPAG 57

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
             + L  +P+ Y + L+A+G+ + FQ+ P FR
Sbjct: 58  DGFFLATSPELYMKRLLAAGYGKLFQLTPVFR 89


>gi|218708311|ref|YP_002415932.1| lysyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782467|sp|B7VHR8|SYK3_VIBSL RecName: Full=Uncharacterized protein YjeA
 gi|218321330|emb|CAV17280.1| putative lysyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 323

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 12/116 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------V 511
           F   Q  +  +  ND  S  A ++++   G E+A+G       +  L+ F +       +
Sbjct: 213 FPASQAALAKINPND--SRVADRFEVYFKGIELANGFHELDKPQEQLKRFEDDNTKRIEM 270

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+S + +++    L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP  ++
Sbjct: 271 GLSPQPIDHH---LIEALKAGLPDCAGVALGIDRLIMLALGYDHIDDVTAFPFPRS 323


>gi|255940966|ref|XP_002561252.1| Pc16g09340 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585875|emb|CAP93604.1| Pc16g09340 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 531

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 26/226 (11%)

Query: 112 LPVFGERE----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
           +PV G       YP  ++F      L        I  R+ ++  +R   +  +F+E STP
Sbjct: 169 VPVHGTEHETSPYPRHVQF------LANPATADIIRARSALVQYLRQFFVDRSFMEVSTP 222

Query: 168 IL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR----D 222
           I+ + +    AR F   +        +L  AP+ + + L+  GF++ F+I P FR    D
Sbjct: 223 IVGSVAGGAIARPFYTSATEFPDRQLSLRIAPELWLKRLVVGGFEKIFEIGPSFRNEGLD 282

Query: 223 EDPRSDRLPGEFYQ--LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---NFLRI 277
           +   ++    EFYQ   ++E      +D+L+ M   +R +    +   T +N    F R+
Sbjct: 283 KTHNAEFTTCEFYQAYANLENLMAMTEDLLSGMAAHIRALNTTGTLNPTTANFTAPFRRV 342

Query: 278 CYDDAIRR-YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNP 322
            +   I    G   P+L +P  +       VH+ F   S  L  NP
Sbjct: 343 DFLTGIEEATGHKLPNLESPDALDK-----VHAIFTELSLPLPTNP 383


>gi|315224653|ref|ZP_07866476.1| asparagine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314945281|gb|EFS97307.1| asparagine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 476

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 105/261 (40%), Gaps = 30/261 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV   R +    F+ + D   I   QVV + ++   E+ K + +   + + G ++
Sbjct: 18  ITLKGWVRTFRSNR---FIALNDGSTIDNLQVVVDFENTDPELLKRITTGAAIEVKGRLV 74

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               +  N       +EL A  I IL  +     P+  ++   E +R +   L +R  T 
Sbjct: 75  ESQGKGQN-------VELQASNISILGDSNPEEYPIQPKKHSLEFLR-ENAHLRVRSSTF 126

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----------- 187
              +  R+ +  ++        F   +TPI+T S  EGA +    + ++           
Sbjct: 127 SAVMRVRSTLAFAIHKYFQDNGFFYVNTPIITGSDAEGAGEMFRVTTLDAKNPPLNENGE 186

Query: 188 ---QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
              +  F+          QL     A    + +   P FR E+  + R   EF+ ++ EM
Sbjct: 187 VDYKKDFFGRETNLTVSGQLEGETFAMALGKIYTFGPTFRAENSNTSRHLAEFWMIEPEM 246

Query: 242 SFVEQDDILNTMENVLRGVFE 262
           +F +  D +N  E+ ++ V +
Sbjct: 247 AFYDLIDNMNLAEDFIKYVLQ 267


>gi|288919244|ref|ZP_06413580.1| lysyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288349339|gb|EFC83580.1| lysyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 511

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 122/280 (43%), Gaps = 13/280 (4%)

Query: 4   YRTHSCGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           YRT S      + + G  VRL+G V   R  GG++F  I+D  G  QV  + D    E+ 
Sbjct: 14  YRTDSVTAAAGAAEDGEVVRLAGRVVLWRRMGGLVFGHIQDRAGRVQVSLSRD----ELG 69

Query: 63  KSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREY 120
                EW   +  G  +  + +        G+  + A ++ +L+     LP    G    
Sbjct: 70  VDTFQEWARAVKIGDFVGVTGKLYTTR--RGERTVGASELVVLNRTVRALPDKWLGLSNV 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARD 179
              +R +Y  L +  D+  +  + R R I+ +R  +   +F+E  TP+L  A+S   AR 
Sbjct: 128 EARLRRRYLDLLVNNDSRERFRI-RARTISRIRRFLDDNDFLEVETPMLQEAASGAAARP 186

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+         FY L  +P+ + + ++    DR +++   FR+E      L  EF  L+ 
Sbjct: 187 FITHHNALGEDFY-LRISPETFLKRVVVGSLDRVYELGRNFRNEGMDPSHLQ-EFTMLEW 244

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
             ++ +  D +  +  ++  V ++     TV+   +++ +
Sbjct: 245 YAAYWDYRDNMRFVREMILAVLDDVFGSRTVTYGGVKLDF 284



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 27/40 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP  G+  GIDR++ LL  A  +REV LFP+ ++
Sbjct: 427 AMEYGMPPMSGLGIGIDRLIALLTDAPTLREVVLFPLMRD 466


>gi|17556372|ref|NP_499478.1| hypothetical protein Y66D12A.23 [Caenorhabditis elegans]
 gi|15795206|emb|CAC70140.1| C. elegans protein Y66D12A.23, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 448

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 117/286 (40%), Gaps = 43/286 (15%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYG--ITQVVANPDSACFEIAKSVR-SEWVLCIDGLVMS 79
           L GW   V+  G  +F+ I         Q+VAN      EI + +R    +     L  S
Sbjct: 15  LDGWAKSVQKSGKNVFVKIDKGRAGEPIQLVANK-----EIGQEIRVGSAIRATGSLEHS 69

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
           R A+         ++E  A++++++   E    P + +   P+++R K   L  R     
Sbjct: 70  RGAQQ--------EMEFVAEQLKVVGNDEN---PRYDDLS-PDNLR-KKTHLRARNSKFA 116

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPSRVNQGSFYALPQA 197
             +  R+ I        ++ +FI   TP LT +  EG  +   +V +   +     L + 
Sbjct: 117 ALLRARSAIFRETHEFFMSRDFIHIDTPKLTRNDCEGGGEVFDVVTTTSTEAGDGGLKEE 176

Query: 198 P------QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDIL 250
           P       Q     M S   R + + P FR E  +S     EF+ L+ E++FVE  D++ 
Sbjct: 177 PMFLSVSSQLHLEAMVSRLQRVYILGPSFRAERQQSHAHLSEFHMLEAEVAFVETIDEMC 236

Query: 251 NTMENVLRGVFEEFSNGNT------------VSN-NFLRICYDDAI 283
             +E+ ++ +    ++               +SN  F RI YD+A+
Sbjct: 237 TLVESYIQHMISYLNSSKLEPETAIIGSKIPISNIKFPRIRYDEAV 282


>gi|284989232|ref|YP_003407786.1| lysyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284062477|gb|ADB73415.1| lysyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 528

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 27/239 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC---- 72
            G    ++G V  VR  G + F  +R+     QV+ + D    E   + +++  L     
Sbjct: 88  TGERAGVTGRVIFVRNTGKLCFATLREGDAELQVMLSLDRVGEESLAAWKADVDLGDHVF 147

Query: 73  IDGLV-MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
           ++G V  SR  E    ++     +L+A+ +         PLPV   +   E +R + R++
Sbjct: 148 VEGEVGTSRRGEL---SVFADSWQLTAKALR--------PLPV-AHKPMSEELRVRRRYV 195

Query: 132 DL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQG 189
           DL  RD   + + +R  ++ ++R  +    ++E  TP+L T      AR F    R +  
Sbjct: 196 DLIVRDEARRTVRQRATVMATLRRELATRGYLEVETPMLQTVHGGAAARPF----RTHMN 251

Query: 190 SF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           +F     L  AP+ + +  +  G +R F+I   FR+E   S   P EF  L+   ++ +
Sbjct: 252 AFDLDLYLRIAPELFLKRCIVGGLERVFEINRNFRNEGVDSTHSP-EFAMLEAYQAYAD 309



 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  G+DR++M L G   +RE  LFP+
Sbjct: 487 ALEYGMPPTGGMGMGMDRLMMTLTGL-GIRETILFPL 522


>gi|257058766|ref|YP_003136654.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256588932|gb|ACU99818.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 573

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/340 (20%), Positives = 138/340 (40%), Gaps = 33/340 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCIDGLV 77
           V ++G +   R  G + F  ++D     Q+  +    D++  E+  +  +   L   G +
Sbjct: 68  VAIAGRIIARRVFGKLAFFSLQDETATIQLYLDKQQIDTSMTEVTDAFNTLKKLTDTGDI 127

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
           +             G++ +  Q   IL+ +  LPLP           R++ R++DL  + 
Sbjct: 128 LGVVGTIKRTE--KGELSVKVQTYTILTKSL-LPLPDKWHGLTDTEKRYRQRYVDLIVNP 184

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALP 195
            + +   +R +I  S+R  +    FIE  TP+L + +    AR F+          Y L 
Sbjct: 185 QVRQTFRRRAQITASIRRYLDENGFIEIETPVLQSEAGGAEARPFITYHNTLDMELY-LR 243

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + + + L+  GF++ F++   FR+E   +   P EF  +++  ++ +  D++   E 
Sbjct: 244 IATELHLKRLIIGGFEKVFELGRIFRNEGVSTKHNP-EFTSIEVYQAYADYFDMMELTEA 302

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEHFVHSEFR 312
           ++       +N        L++ Y +        + DL  P   + M ++ +     +F 
Sbjct: 303 LI-------TNAAQAVLGTLKLTYQEI-------EIDLSTPWRRVTMTDIVKEKTGLDFD 348

Query: 313 VFSKILSVNPGYEVWAI------PAKGGGGNRAFCDRMNE 346
            F+   S     +   I      P+ G   N AF  ++ E
Sbjct: 349 SFTDFESAKEAAKKAGIDVPNDCPSLGKLMNEAFEQKVEE 388



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 470 ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPL 506


>gi|12044988|ref|NP_072798.1| lysyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|255660156|ref|ZP_05405565.1| lysyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351162|sp|P47382|SYK_MYCGE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|3844726|gb|AAC71353.1| lysyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078779|gb|ABY79397.1| lysyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 490

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 4/151 (2%)

Query: 125 RFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLV 182
           R + RFLDL  +   +++ +KRT+II S+R  +    FIE  TP L A      A+ F  
Sbjct: 152 RARKRFLDLTYNLAMRDVFLKRTKIIKSIRSFLDQNGFIEVETPTLQAVLGGANAKPFKT 211

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                +  FY         K+L++  GF++ +++   FR+E   +   P EF  +++  +
Sbjct: 212 HYNALKADFYLRIANEIALKKLIIG-GFNKVYEMGKMFRNEGVDTTHNP-EFTSIEIYQA 269

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           + + + +L  +E +++ + E  +  +   NN
Sbjct: 270 YADFEVMLVLVEKLIQSLCESLNQFSFNWNN 300


>gi|320101031|ref|YP_004176623.1| tRNA synthetase class II (D K and N) [Desulfurococcus mucosus DSM
           2162]
 gi|319753383|gb|ADV65141.1| tRNA synthetase class II (D K and N) [Desulfurococcus mucosus DSM
           2162]
          Length = 364

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 22/176 (12%)

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R   + + +   + ++ +MR  +    F E  +PI+   S  G R  +  S    G  Y
Sbjct: 50  VRHPRVLRAVKTYSMVLKAMRSILDEHGFTELPSPIIGYVSDPGLRGAVKASIKMYGKVY 109

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDE---DPRSDRLPGEFYQLDMEMSFVEQDDI 249
            +  +   YKQL  AS   + +  A   R E   +  + R   EF QLD+E S    DD+
Sbjct: 110 EVQSSVIMYKQL-YASLLGKIYYAARNLRVEPVENASTGRHLAEFTQLDVEASLTTADDV 168

Query: 250 LNTMENVLRGVF---------------EEFSNGNTVSNNFLRICYDDAI---RRYG 287
           +   E  L G                 E F     +   + RI YD A+   RR G
Sbjct: 169 MMLAEETLYGAVKHLLNYHSGLLTREEERFLEETIIKPPYPRIDYDSAVELLRRKG 224


>gi|16764360|ref|NP_459975.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167552996|ref|ZP_02346746.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167993358|ref|ZP_02574452.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168243771|ref|ZP_02668703.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168264670|ref|ZP_02686643.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|194443471|ref|YP_002040200.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194450065|ref|YP_002044994.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197249609|ref|YP_002145920.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|200390273|ref|ZP_03216884.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|20139879|sp|P58696|SYN_SALTY RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|16419513|gb|AAL19934.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|194402134|gb|ACF62356.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194408369|gb|ACF68588.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197213312|gb|ACH50709.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|199602718|gb|EDZ01264.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205322466|gb|EDZ10305.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205328543|gb|EDZ15307.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205337229|gb|EDZ23993.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205346905|gb|EDZ33536.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|261246216|emb|CBG24020.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992741|gb|ACY87626.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157543|emb|CBW17033.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911986|dbj|BAJ35960.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|323129266|gb|ADX16696.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332987891|gb|AEF06874.1| DNA-binding transcriptional regulator AsnC [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 466

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 108/275 (39%), Gaps = 54/275 (19%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V + GWV   R    GI FL + D             +CF+  ++V +  +   +  V+ 
Sbjct: 20  VTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNEEVLH 67

Query: 80  RSAETINANIITGQI----------ELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKY 128
            +  T  + ++TG++          E+ A K+E+    E+    P+  +R    SI +  
Sbjct: 68  LT--TGCSVVVTGKVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRH---SIEYLR 122

Query: 129 RFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +  ++      + F   STP++TAS  EGA +     RV
Sbjct: 123 EVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF---RV 179

Query: 187 NQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +      LP+  Q                    Q      A    + +   P FR E+  
Sbjct: 180 STLDLENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSN 239

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ L+ E++F + +D     E +L+ VF
Sbjct: 240 TSRHLAEFWMLEPEVAFADLEDNARLAEAMLKYVF 274



 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|288575820|ref|ZP_06393990.1| lysine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288566802|gb|EFC88362.1| lysine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 306

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  E   + F +    K+  ++    +   Y RA + G+PP 
Sbjct: 215 RFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 274

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 275 GGCGIGIDRLVMLLTDSQTIRDVILFP 301



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 14/139 (10%)

Query: 159 ENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216
           E+++E  TP++    P GA  + F+          Y L  AP+ Y + L+  G +R F+I
Sbjct: 3   EHYLEVETPMM-HPIPGGATAKPFVTHHNALDIPLY-LRIAPELYLKRLVVGGLERVFEI 60

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--- 273
              FR+E   S R   EF  ++   +F + + ++   E+++R      +    +S N   
Sbjct: 61  NRSFRNEG-MSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAKISYNGKE 119

Query: 274 ------FLRICYDDAIRRY 286
                 F R+   DAI++Y
Sbjct: 120 VDLESPFERLTIIDAIKKY 138


>gi|328865342|gb|EGG13728.1| asparagine-tRNA ligase [Dictyostelium fasciculatum]
          Length = 648

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/279 (20%), Positives = 106/279 (37%), Gaps = 20/279 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V + GW+H  R    + F+ +RD  G  Q V   D     +   +  E  + + G +
Sbjct: 224 GQRVHIKGWLHEARIQKSVGFIKLRDGTGFLQCVLTGDLVHPSLHDVLIREATVSLYGTL 283

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                           +EL     +++  +      +     + + + F  R + LR   
Sbjct: 284 TVPPP----GKKAPQDVELQVDYWQLIGESNVDLEGIINTESHVDQM-FDQRHIVLRGTR 338

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R+  + + R       + E + P L  +  EG  +         GS   L Q+
Sbjct: 339 ASAIMKMRSLAMKAFRDHFYDNGYFEVTPPTLVNTFCEGGSELFTLDFF--GSPAYLTQS 396

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y + ++    D  F IA  +R E  ++ R   EF  +++E  F++ DD+L+ +E ++
Sbjct: 397 SQLYLETMIPVVGDA-FCIAQSYRAEASKTRRHLAEFTHIEVESPFIKFDDLLDRIEFLV 455

Query: 258 RGVFEEFS------------NGNTVSNNFLRICYDDAIR 284
             V E               N       F+R+ Y++ I+
Sbjct: 456 CDVAERLFKLDKDLLLTVNPNAKIPERPFMRMNYEEGIK 494



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 8/121 (6%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAF 508
           K I F   P  M    M     +D L+      DL+  G  EI  G +R    + ++ A+
Sbjct: 533 KPIFFCRFPHEMKAFYMARCPEDDRLTEST---DLLMPGVGEIVGGSMRIANYQQLMDAY 589

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
              G+      +++       + G  PHGG   G +R +   LG +++R V L+P  ++ 
Sbjct: 590 KKEGLDP----SQYYWFTDQRKYGTCPHGGYGLGFERFLTWFLGEEHIRNVCLYPRMRDR 645

Query: 569 C 569
           C
Sbjct: 646 C 646


>gi|262401135|gb|ACY66470.1| aspartyl-tRNA synthetase [Scylla paramamosain]
          Length = 132

 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRG 259
           YKQ+ +A  F + F I P FR E+  + R   EF  LD+EM+F     + LNT+ N+   
Sbjct: 1   YKQMAIAGDFGKVFTIGPVFRAENSNTHRHLTEFVGLDLEMAFTHHYHEALNTIGNMFTE 60

Query: 260 VF 261
           +F
Sbjct: 61  IF 62


>gi|50292609|ref|XP_448737.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528049|emb|CAG61700.1| unnamed protein product [Candida glabrata]
          Length = 591

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 8/182 (4%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRI 148
           G+I +  ++IE+L+     LP   FG ++  +  R++ R+LDL   +D+  K  + R++I
Sbjct: 198 GEISVFVKRIELLTPCLHMLPADHFGFKD--QETRYRKRYLDLIMNKDS-RKRFITRSKI 254

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           I  +R  +   +FIE  TP++   +        V    +      +  AP+ + + L+  
Sbjct: 255 IKYIRKFLDNRDFIEVETPMMNVIAGGATAKPFVTHHNDLDMDMFMRIAPELFLKELVVG 314

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           G DR ++I   FR+E       P EF   +   ++ +  D+++  E +   + +E  NG+
Sbjct: 315 GMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTELLFSEMVKEI-NGS 372

Query: 269 TV 270
            V
Sbjct: 373 YV 374



 Score = 43.9 bits (102), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  +  +REV LFP
Sbjct: 540 ALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLFP 575


>gi|326803025|ref|YP_004320843.1| lysine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651480|gb|AEA01663.1| lysine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 500

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 28/40 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GG+  GIDR+VM+   + ++R++ LFP  +N
Sbjct: 460 ALETGMPPTGGLGIGIDRLVMIFTNSDSIRDILLFPTMRN 499


>gi|323497630|ref|ZP_08102647.1| asparaginyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323317379|gb|EGA70373.1| asparaginyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 466

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 108/275 (39%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V         +
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYEN 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKIVESPAKGQDFELAATDVKVVGWVEDAETYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + F   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGFFWVSAPLITASDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     +    Y +        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMENLPRTDKGDVDYNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + +DI    E++L+ VF+
Sbjct: 241 SRHLAEFWMVEPEVAFADLNDIAKLSEDMLKFVFK 275


>gi|226226985|ref|YP_002761091.1| lysyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226090176|dbj|BAH38621.1| lysyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 523

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG+  GIDR+ M L   +N+R+V LFP
Sbjct: 482 RAMEYGMPPTGGVGIGIDRLFMYLTDTQNIRDVILFP 518



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 115/273 (42%), Gaps = 32/273 (11%)

Query: 5   RTHSC----GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---A 57
           R+HS       LG +  G  V ++G +   R  G   F  + D  G  Q+    D    A
Sbjct: 60  RSHSSVAAIAALGDAQEGPEVSVAGRLVSWRGQGKTAFAHLVDMDGRLQLYFRRDDMGDA 119

Query: 58  CF-EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE------- 109
            F ++A+    +WV     ++ +R+ E   A +    +EL ++ +  L + +E       
Sbjct: 120 VFAQLAEYDLGDWVGVRGTMIRTRTGE---ATVKVTHVELLSKSLRPLPLGKEQMVDGQL 176

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK----RTRIINSMRCRMIAENFIECS 165
           +    F + E     R + R+ DL    +H  +      R+ +  ++R  +    ++E  
Sbjct: 177 VRYSAFSDTEQ----RARQRYADL---AVHPEVRALFRARSVLTRAVRSHLDGLGYLEVE 229

Query: 166 TPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
           TP+L        AR F+          Y L  A + Y + L+  GF+R ++I   FR+E 
Sbjct: 230 TPVLQPLYGGAAARPFVTHHNALDMPLY-LRIADELYLKRLIVGGFERVYEIGHDFRNEG 288

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
                 P EF  L+   +F +   +++ +E+++
Sbjct: 289 IDRTHNP-EFTMLEFYEAFADYTTMMSRVESLI 320


>gi|320581604|gb|EFW95824.1| Lysyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 590

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 90/177 (50%), Gaps = 7/177 (3%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRII 149
           G++ + A K+++L+     LP   +G ++  +  R++ R+LDL  +   K+  V R++II
Sbjct: 195 GELSVFATKVKLLTPCLHMLPTEHYGFKD--QEARYRKRYLDLIMNKSTKDTFVTRSKII 252

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           + +R  + + NFIE  TP++   +    A+ F+          Y +  AP+ + + L+  
Sbjct: 253 SYIRKFLDSRNFIEVETPMMNVIAGGATAKPFITHHNDLDMDMY-MRIAPELFLKELVVG 311

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           G +R ++I   FR+E       P EF   +   ++ +  D+++T E +   + +E +
Sbjct: 312 GLERVYEIGRQFRNEGIDMTHNP-EFTTCEFYEAYADVYDLMDTTELLFSEMVKEIT 367



 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  +  +REV LFP
Sbjct: 536 ALEYGLPPTAGWGCGIDRLAMFLTDSNTIREVLLFP 571


>gi|88859211|ref|ZP_01133851.1| asparaginyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88818228|gb|EAR28043.1| asparaginyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 465

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 106/280 (37%), Gaps = 49/280 (17%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV------ 65
           G   V S V + GW+   R    GI FL + D             +CF+  ++V      
Sbjct: 12  GAVAVDSQVTVKGWIRTRRDSKAGISFLAVHD------------GSCFDPIQAVVPNSLN 59

Query: 66  -RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPES 123
             ++      G  +  + + + +       E+ A ++ I+ + E     P+  +R    S
Sbjct: 60  NYNDVTTLTAGCSVEVTGKLVRSEGQGQSFEIQADEVNIVGMVENPDTYPMAAKRH---S 116

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           I +      LR  T     V R R  +  ++        F+  STPI+TAS  EGA +  
Sbjct: 117 IEYLREHAHLRPRTNMIGAVTRVRNCLAQAIHRFYHERGFLWISTPIITASDCEGAGEMF 176

Query: 182 VPSRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFR 221
              RV+      LP+  +                    Q       S     +   P FR
Sbjct: 177 ---RVSTLDMQNLPRDDKGNVDYSEDFFGKEAFLTVSGQLNGETYCSAMSNIYTFGPTFR 233

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            E+  + R   EF+ ++ E++F + +DI    E++L+ VF
Sbjct: 234 AENSNTSRHLAEFWMVEPEVAFADLNDIAKLAEDMLKYVF 273



 Score = 37.4 bits (85), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 7/86 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF-QCGMPPHGGIA 540
           D+V  G  EI  G  R    +++      +G++K+         YR   + G  PH G  
Sbjct: 380 DVVAPGIGEIIGGSQREERLDILDARLEEMGLNKDDY-----SWYRDLRKYGTVPHSGFG 434

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G +R+V  + G  NVR+V  FP ++
Sbjct: 435 LGFERLVAYVTGMGNVRDVIAFPRTK 460


>gi|261367898|ref|ZP_05980781.1| lysine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282570710|gb|EFB76245.1| lysine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 501

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/287 (21%), Positives = 127/287 (44%), Gaps = 29/287 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           ++ G  V L+G +   R  G   F  +RD  G  Q+    D    E   + +    L I 
Sbjct: 59  AETGKIVTLAGRMMSKRVMGKASFAHLRDQKGDIQIFVKRDLLGDEAYAAFKK---LDIG 115

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF---GEREYPESIRFKYRFL 131
            ++  R  E     +  G+I +   ++ +LS +       F    +RE     R++ R++
Sbjct: 116 DIIGCR-GEVFRTKM--GEISVRVNELTLLSKSLLPLPEKFHGLTDRE----ARYRQRYV 168

Query: 132 DLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +  + +  +KR+ I+  +R  +  + F+E  TPILT       AR FL        
Sbjct: 169 DLIVNPDVKQTFIKRSAILRELRSFLDGKGFLEVETPILTPFEIGASARPFLTHHNTLDM 228

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQD 247
               L    + Y + L+  G DR +++   FR+E  DP+ +    EF  +++  ++ +  
Sbjct: 229 DM-VLRIETELYLKRLIVGGMDRVYEVGRIFRNEGMDPKHN---PEFTTIELYQAYTDYH 284

Query: 248 DILNTMENVLRGVFEEFSNGNTVS--------NNFLRICYDDAIRRY 286
            +++ +E +++ V ++      ++        +++ R+   +A+++Y
Sbjct: 285 GMMDLVEEMMKTVAQKVCGSLQITYQGKDIDLSHWERMTMTEAVKKY 331



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 459 ALEYGLPPTGGLGFGVDRLVMLLTDSASIRDVLLFP 494


>gi|17231563|ref|NP_488111.1| lysyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|39932230|sp|Q8YPW9|SYK_ANASP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|17133206|dbj|BAB75770.1| lysyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 561

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/331 (19%), Positives = 138/331 (41%), Gaps = 40/331 (12%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV----------VANPDSACFEIAKSV 65
           +V + V ++G +   R  G + F  + D  G  Q+          +A  D+  F   K +
Sbjct: 50  EVETEVAIAGRIMARRVFGKLAFFTLEDETGTIQLYLEKNRIQESMAEIDANAFNHLKQL 109

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                +      + R+ +        G++ +  ++  IL+ +  LPLP         + R
Sbjct: 110 TDVGDILGAKGTIKRTEK--------GELSVYVKEYTILTKSL-LPLPDKWHGLTDVAKR 160

Query: 126 FKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
           ++ R++DL  +  + +   +R +I   +R  +   +F+E  TP+L + +    AR F+  
Sbjct: 161 YRQRYVDLIVNPEVRQTFRRRAQITAGIRRYLEQRDFLEIETPVLQSEAGGADARPFVTY 220

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               +   Y L  A + + + L+  GF++ F++   FR+E   +   P EF  +++  ++
Sbjct: 221 HNTLEMELY-LRIATELHLKRLIVGGFEKVFELGRIFRNEGISTRHNP-EFTSIEVYQAY 278

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMH 300
            + +D++   E ++  V ++           L+I Y         +  DL  P   + MH
Sbjct: 279 ADYNDMMALTEGIITTVAQDVLGT-------LQITYQG-------ETVDLTPPWRRVTMH 324

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           ++ + +   +F  F  +       +   IP 
Sbjct: 325 DLVKEYTGLDFHSFQTLEEAKSAGKNAGIPG 355



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 3/57 (5%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ---NFCDLLMGSPSTVSV 581
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+ +   +F       P+T ++
Sbjct: 458 ALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLKPEGSFIKAYRYEPTTQTL 514


>gi|229824567|ref|ZP_04450636.1| hypothetical protein GCWU000282_01911 [Catonella morbi ATCC 51271]
 gi|229785938|gb|EEP22052.1| hypothetical protein GCWU000282_01911 [Catonella morbi ATCC 51271]
          Length = 502

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG   GIDR+VML  GA  +R+V LFP
Sbjct: 461 ALEYGMPPTGGWGLGIDRLVMLFTGATAIRDVLLFP 496


>gi|315229828|ref|YP_004070264.1| asparagine--tRNA ligase-like protein [Thermococcus barophilus MP]
 gi|315182856|gb|ADT83041.1| asparagine--tRNA ligase-like protein [Thermococcus barophilus MP]
          Length = 304

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 10/128 (7%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTAS-------SPEGARDFLVPSRVNQGSFYALPQA 197
           +T+II  M    + + F +   P++ +S        P  +     P     G    L  +
Sbjct: 18  QTKIIEYMTRFFVGKGF-KWLLPVMLSSITDPLWPDPAASEALKPPEIEAYGGKLRLMHS 76

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDMEMSFVEQDDILNTMEN 255
              +KQL +A G D+ F ++P  R E   +D  R   EF QLD E+++   DD+++ +E 
Sbjct: 77  MILHKQLAVAMGIDKLFILSPNIRLEGREADDGRHAYEFTQLDFEIAYATMDDVMSLIEE 136

Query: 256 VLRGVFEE 263
            + G+F+E
Sbjct: 137 AISGLFKE 144



 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 7/85 (8%)

Query: 482 YDLVCN-GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM-PPHGG 538
           YDL    G+ E++SGG R    +++++     GIS E     F       + G+  P  G
Sbjct: 215 YDLYLPWGYGEVSSGGEREWEYDIIVRKMKKAGISLEA----FKPYLEVAKAGLLKPTAG 270

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
              G++R+V  ++GAK++ EV  FP
Sbjct: 271 AGIGMERLVRFIVGAKHIAEVQPFP 295


>gi|86147217|ref|ZP_01065532.1| lysyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85834932|gb|EAQ53075.1| lysyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 323

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 12/116 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------V 511
           F   Q  +  +  ND  S  A ++++   G E+A+G       +  L+ F +       +
Sbjct: 213 FPASQAALAKINPND--SRVADRFEVYFKGIELANGFHELDKPQEQLKRFEDDNAKRIEM 270

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+S + +++    L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP  ++
Sbjct: 271 GLSPQPIDHH---LIEALKAGLPDCAGVALGIDRLIMLALGYDHIDDVTAFPFPRS 323


>gi|296272467|ref|YP_003655098.1| lysyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096641|gb|ADG92591.1| lysyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 504

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 11/243 (4%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           +SG +   R  G   FL I D  G+ Q+    D+       +V  + +   D +      
Sbjct: 60  VSGRIKFFRLMGKASFLKIEDESGMLQLYLARDNLPEGFYNNVFKKNIEVGDII------ 113

Query: 83  ETINANIITGQIELS--AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LH 139
           E      +TGQ ELS     ++IL+ A   PLP        + +R++ R+LDL  ++ + 
Sbjct: 114 EVGGFPFVTGQGELSLHVDSVQILTKAIS-PLPEKYHGIQDKELRYRQRYLDLIMNSEVR 172

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           K    R+++I+  R    ++ F+E  TP++   +               G    L  AP+
Sbjct: 173 KTFHVRSKVISLTRRFFESKGFLEVETPMMHPIAGGANAKPFTTHHNALGVDRFLRIAPE 232

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E   +   P EF  ++   ++    D++   +     
Sbjct: 233 LYLKRLIVGGFEAVFEINRNFRNEGMDATHNP-EFTSIEFYWAYKTYKDLIALTKEYFEY 291

Query: 260 VFE 262
           +FE
Sbjct: 292 LFE 294



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GM P  G   GIDR+VM+L    ++R+V LFP
Sbjct: 453 ALSYGMAPTAGQGIGIDRLVMMLTNQHSIRDVLLFP 488


>gi|119505212|ref|ZP_01627287.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase [marine
           gamma proteobacterium HTCC2080]
 gi|119458903|gb|EAW40003.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase [marine
           gamma proteobacterium HTCC2080]
          Length = 503

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EIA+G    +  E   + F      K+  +     F   Y RA + GMPP 
Sbjct: 411 RFEFFVGGREIANGFSELNDPEDQAERFRAQAAEKDSGDEEAMHFDHDYVRALEYGMPPT 470

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  A ++R+V LFP
Sbjct: 471 AGEGIGIDRLVMLLTDAASIRDVLLFP 497



 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 13/179 (7%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           + +R++ R++DL  +   + + + R+  ++ +R  +    F+E  TP+L        A+ 
Sbjct: 161 QEMRYRQRYVDLIVNPDSRAVFRMRSAAVSFIRRFLDDRGFMEVETPMLHPIPGGAAAKP 220

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           Y L  AP+ Y + L   GF++ ++I   FR+E   S R   EF  L+ 
Sbjct: 221 FETHHNALDMPMY-LRIAPELYLKRLTVGGFEKVYEINRNFRNEG-LSTRHNPEFTMLEF 278

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTD 289
             ++ + +D ++  E +LR + +      TV         S  F R+   DAI +Y  D
Sbjct: 279 YWAYADYNDAMDLTEALLRELTQNLLGTMTVPYGELQLDFSQPFARLSVLDAIYKYNPD 337


>gi|70999878|ref|XP_754656.1| asparaginyl-tRNA synthetase Slm5 [Aspergillus fumigatus Af293]
 gi|66852293|gb|EAL92618.1| asparaginyl-tRNA synthetase Slm5, putative [Aspergillus fumigatus
           Af293]
 gi|159127670|gb|EDP52785.1| asparaginyl-tRNA synthetase Slm5, putative [Aspergillus fumigatus
           A1163]
          Length = 572

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 114/274 (41%), Gaps = 44/274 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCID---- 74
           ++++G+V  VR      F +I D   I   Q    P  A   + +   + W+L ++    
Sbjct: 50  IKINGFVRSVRKQKRFAFAEITDGSTIEPLQAFLKPAQAAGYVERVAMTVWILRLELSAD 109

Query: 75  -GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES--IRFKYRFL 131
            G  +S    T  A  I+G  +      E     +   + + G+ E PE+  I+ KY   
Sbjct: 110 GGCRLS----TGTAVEISGLWKACPPGKEQTHELQTTEVKIVGQAE-PETYPIQKKYHSP 164

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAE---------------NFIECSTPILTASSPEG 176
           D  R   H  +  RT   NS+  R  +E                +++   P++T+S  EG
Sbjct: 165 DFLRSIPHLRL--RT-PFNSVLSRFRSECLYQLGNVFRDAPNGGYVQVQPPLITSSDCEG 221

Query: 177 A--------RDFLVPSRVNQGSFYALPQAPQQYKQLLM---ASGFDRYFQIAPCFRDEDP 225
           A        R+ ++  +     F+  P+      QL +   A+     + I+P FR E  
Sbjct: 222 AGETFTVLPRETIMDPKSEGNHFFRAPKYLTVSSQLHLEAYAAELGNVWAISPTFRAEKS 281

Query: 226 RSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLR 258
            + R   EFY L+ EM+F++  D + + +E V+R
Sbjct: 282 DTPRHLSEFYMLEAEMNFMDDLDSLTDAVEYVVR 315


>gi|307243900|ref|ZP_07526025.1| asparagine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492722|gb|EFM64750.1| asparagine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 466

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/305 (21%), Positives = 121/305 (39%), Gaps = 52/305 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSA--CFEIAKSVRSEWVLCIDGL 76
           V+++GW+   R      F+++ D   +   QVV +  +     +++K   S  +L    L
Sbjct: 23  VKIAGWIRTSRISKSFGFMEVNDGSFFKNLQVVIDEKALDNFAQVSKLAISSSILVEGKL 82

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V   +A+          IE+ A KI I+    +   P+  ++   E +R     L  R +
Sbjct: 83  VAVDNAK--------NPIEIHASKI-IVEGDSDSSYPLQKKKHTFEYLR-TIAHLRPRSN 132

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVPSRVNQ 188
           T       R+ +  ++       NF+   TP++T S  EGA         D   P     
Sbjct: 133 TFSAVFRVRSVVAFALHKFFNERNFVYAHTPLITGSDTEGAGEMFRVTTLDMENPPLTKD 192

Query: 189 GS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           G       F+          QL   +MA  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 193 GKVDYSKDFFGKEANLTVSGQLNGEIMALAFRNIYTFGPTFRAENSYTGRHASEFWMVEP 252

Query: 240 EMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNFLRIC 278
           E+ F + +D ++  E++++ V              F  F +        N +++NF RI 
Sbjct: 253 EIVFADLEDNMDLAEDMIKYVINYVLEHCPEEMAFFNSFIDKGLLERLDNILNSNFKRIT 312

Query: 279 YDDAI 283
           Y +A+
Sbjct: 313 YTEAV 317



 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G  R    +V++     +G+++E     +       + G   H G   
Sbjct: 381 DLLVPGVGEIIGGSQREERYDVLMNRIQELGLNEE----EYWWYLELRKFGTATHSGFGL 436

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +RI+M L G  N+R+V  FP +
Sbjct: 437 GFERIIMYLTGMSNIRDVIPFPRT 460


>gi|281420624|ref|ZP_06251623.1| lysine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281405397|gb|EFB36077.1| lysine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 576

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP
Sbjct: 460 RALQYGMPPTSGIGIGIDRLVMLMTGKTFIQEVLFFP 496



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 130/293 (44%), Gaps = 43/293 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCIDGLV 77
           V ++G +   R  G   F +++D  G  QV    D  C +  K + +   + +L I   +
Sbjct: 55  VVIAGRMMGRRVMGKASFAELQDSKGRIQVYIARDEICPDENKDLYNTVFKKLLDIGDFI 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGEREYPESIRFKYR 129
                +       TG+I + A+++ +LS + + PLP+        + + + PE +R++ R
Sbjct: 115 ---GVKGFVFRTQTGEISVHAKELCLLSKSLK-PLPIVKYKDGVAYDKFDDPE-LRYRQR 169

Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL   D +    ++R  ++ ++R  +    + E  TP L + +    AR F+      
Sbjct: 170 YVDLIVNDGVKDTFLQRATVLRTLRSVLDNAGYTEVETPTLQSIAGGASARPFIT----- 224

Query: 188 QGSFYALPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG--------E 233
              F AL Q      A + Y + L+  GF+  ++I   FR+E    +  P         +
Sbjct: 225 --HFNALDQDMYMRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRNHNPEFTCMELYVQ 282

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIR 284
           +   +  M+F E+  +L T+   + G  E   +GN +S    + R+   DAI+
Sbjct: 283 YKDYNWMMAFTEK--LLETICIAVNGKPEREIDGNIISFKAPYRRLPILDAIK 333


>gi|208809240|ref|ZP_03251577.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208729041|gb|EDZ78642.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
          Length = 464

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 113/276 (40%), Gaps = 47/276 (17%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D             +CF+  ++V +  +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNE 63

Query: 76  LVMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFK 127
            V+  +  T  + I+TG++  S    Q+ EI +   E+   V     YP      SI + 
Sbjct: 64  DVLRLT--TGCSVIVTGKVVASPGQGQQFEIQTSKVEVAGWVEDPDTYPMAAKRHSIEYL 121

Query: 128 YRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
                LR  T     V R R  +  ++      + F   STP++TAS  EGA +     R
Sbjct: 122 REVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMF---R 178

Query: 186 VNQGSFYALPQAPQQY----------KQLLMASGF---DRY------FQIAPCFRDEDPR 226
           V+      LP+  Q            +  L  SG    + Y      F  +P FR E+  
Sbjct: 179 VSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKFIPSPTFRAENSN 238

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + R   EF+ L+ E++F   +DI    E +L+ VF+
Sbjct: 239 TSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFK 274


>gi|226945981|ref|YP_002801054.1| lysyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|226720908|gb|ACO80079.1| lysyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 500

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 19/227 (8%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ I+D  G  QV  +      E  ++V+  W L   G +++  AE   A    G + + 
Sbjct: 81  FMVIQDMTGRIQVYVDRKGLPAETLEAVK-HWDL---GDIIA--AEGTLARSGKGDLYVH 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCR 155
              + +L+ +   PLP           R++ R++DL    +T H   V R++II  +R  
Sbjct: 135 MSTVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRV-RSQIIAHIRRF 192

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ----APQQYKQLLMASGFD 211
           +   +F+E  TP+L    P GA     P + +  +   LP     AP+ Y + L+  GF+
Sbjct: 193 LAERDFLEVETPMLQVI-PGGAA--AKPFQTHHNAL-DLPMFLRIAPELYLKRLVVGGFE 248

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           R F+I   FR+E   +   P EF  L+   ++ + +D ++  E + R
Sbjct: 249 RVFEINRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEQLFR 294



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 408 RFELFIGGREIANAYSELNDAEDQAERFMQQVRDKDAGDDEAMHFDADFVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTDSPSIRDVILFP 494


>gi|114563340|ref|YP_750853.1| asparaginyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122299607|sp|Q081Q0|SYN_SHEFN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|114334633|gb|ABI72015.1| asparaginyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 466

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 123/323 (38%), Gaps = 69/323 (21%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    GI FL + D             +CF+  + V    + 
Sbjct: 12  GEHAVGSQVTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPIQGVLPNSLA 59

Query: 72  CIDGLVMSRSAETINANIITGQI----------ELSAQKIEILSVAEEL-PLPVFGEREY 120
             +  V+  +A    + ++TG++          EL   +I +    ++    P+  +R  
Sbjct: 60  NYNDDVLKLTAGC--SVVMTGEVVASPGAGQAFELQVTEIVVTGFVDDPDTYPMSAKRHS 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGAR 178
            E +R       LR  T     V R R  +  ++      E FI  STP++TAS  EGA 
Sbjct: 118 IEHLR---ELAHLRPRTNIIGAVARVRNCLSQAIHRFYHQEGFIWVSTPLITASDCEGAG 174

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFR 221
           +    S ++  +     +    Y +        L  SG            + +   P FR
Sbjct: 175 EMFRVSTLDMENLPRTAEGKVDYDKDFFGKESFLTVSGQLNAETYACALSKVYTFGPTFR 234

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR----GVFEE------FSNGNT-- 269
            E+  + R   EF+ ++ E++F   DD     E +L+     V EE      F N     
Sbjct: 235 AENSNTTRHLAEFWMVEPEVAFATLDDAAELAEKMLKFAFSAVLEERMDDLNFFNERVDK 294

Query: 270 ---------VSNNFLRICYDDAI 283
                    VS++F ++ Y DA+
Sbjct: 295 TVIERLQAFVSSDFAQVDYTDAV 317


>gi|258568136|ref|XP_002584812.1| aspartyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237906258|gb|EEP80659.1| aspartyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 561

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 6/84 (7%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI--SKEVVENRFGGLYRAFQCGMPPHGGI 539
           YD    G EI SG  R +  E +  A    G+    E  E+  G    AF+    PH G 
Sbjct: 474 YDFFMRGEEIMSGAQRINEVEELEAAMRARGVDPKSEGFEDYLG----AFRQACSPHAGG 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             G++RIVM  LG  N+R  +LFP
Sbjct: 530 GLGLNRIVMFFLGLPNIRLATLFP 553



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 34/238 (14%)

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF-GEREYPESI--- 124
           ++ + G+V        +A   T  +EL  +KI +++  A++LP+ V   ER  PES    
Sbjct: 158 IVQVTGIVKKPEIPVNSATYST--MELHIRKIYMIAQAAQQLPMQVKDAERPPPESTEEG 215

Query: 125 --------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS----- 165
                         R   R LDL+ +T      +    I+S   ++ AE  ++       
Sbjct: 216 QVDAEGAPIVTLKTRLDNRILDLQTET-----SQAITWISSGVAQLFAEFMLKSGARWIF 270

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           T  L+ ++ EG  D        + ++  L Q+PQ  KQ+ +A      F+I P FR E+ 
Sbjct: 271 TSKLSGTATEGGSDVFELGYFKRKAY--LSQSPQLGKQMCIAGDMMNVFEIGPVFRAEES 328

Query: 226 RSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
            + R   EF  LD E +F     ++L+  E +L  +  E         + ++  Y  A
Sbjct: 329 NTHRHLTEFIGLDFERTFQRHYHEVLSFAEELLVFILSELKTRYKDQIDIIQKSYPKA 386


>gi|226356057|ref|YP_002785797.1| asparaginyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|259511567|sp|C1CV26|SYN_DEIDV RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|226318047|gb|ACO46043.1| putative asparagine--tRNA ligase (asparagine translase)
           [Deinococcus deserti VCD115]
          Length = 445

 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 24/234 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73
           VG  V L  W+      G I FL +RD  G  Q      + +   FE AK +  E  L +
Sbjct: 12  VGETVTLQAWLTDKSGKGKIQFLKLRDGSGFVQATVFKNDVEEEVFESAKRLTQEQALTL 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLD 132
            G V  R+ E        G +ELS +++  +S    E P+     +E+        R L 
Sbjct: 72  TGEV--RADER-----APGGVELSVRRLSPISENHAEYPI---TPKEHGIEFLMDQRHLW 121

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMI----AENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           LR    H+      RI + ++  ++    +E F+    P  T ++ EG  +        +
Sbjct: 122 LR----HRRPWAIMRIRDCVQRAIVDFFHSEGFVRFDAPFFTPNAAEGTTELFEIDLFGE 177

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
              Y L Q  Q + +   A  F + +   P FR E  ++ R   EF+ ++ E++
Sbjct: 178 DKAY-LSQTGQLHAE-AGAFAFGKVYTFGPTFRAEKSKTRRHLLEFWMVEPEVA 229


>gi|153854771|ref|ZP_01996005.1| hypothetical protein DORLON_02003 [Dorea longicatena DSM 13814]
 gi|149752678|gb|EDM62609.1| hypothetical protein DORLON_02003 [Dorea longicatena DSM 13814]
          Length = 463

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 113/306 (36%), Gaps = 55/306 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V + GWV  +R      F+ + D   +   QVV +     F EI+K      V+    LV
Sbjct: 21  VTIGGWVRSIRGSKAFGFIVVNDGTFFEPLQVVYHDKMDNFAEISKLNVGAAVIVTGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A  +E+    E    P +  ++   S  +      LR  T
Sbjct: 81  ATPQAKQ--------PFEIQADTVEV----EGASAPDYPLQKKRHSFEYLRTIAHLRPRT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSRV 186
                V R R + +       +   F+   TP++T S  EGA +           VP   
Sbjct: 129 NTFQAVFRVRSLTAYAIHKFFQERGFVYVHTPLITGSDCEGAGEMFQVTTMDLNNVPKNE 188

Query: 187 N-----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +        F+    +     QL     A  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 DGSVDYSKDFFGKETSLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVLRGV--------------FEEFSNG-------NTVSNNFLRI 277
            EM+F + DD +   E +L+ V              F  F +        N VS++F R+
Sbjct: 249 PEMAFADLDDDMFVAEAMLKYVINYVLENAPEEMNFFNSFVDKGLLERLHNVVSSDFARV 308

Query: 278 CYDDAI 283
            Y +A+
Sbjct: 309 TYTEAV 314



 Score = 38.1 bits (87), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + +      +G+ +E  + +F    R +  G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDYDKLKARMDELGLKEE--DYKFYMDLRKY--GSTRHAGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMGNIRDVIPFPRTVNNCEL 463


>gi|239609302|gb|EEQ86289.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 577

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 14/185 (7%)

Query: 91  TGQIELSAQKIE----ILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-R 145
           TG+ ELS    E    I     ++PL +  +   P       R + L       +I++ R
Sbjct: 189 TGRGELSVTASELPKLITPCLHDIPLRIKEQESSPYD-----RHVQLLSSPTAADILRAR 243

Query: 146 TRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQ 203
           + II  +R   + ++F+E  TPIL AS   GA  R F   +        +L  AP+ + +
Sbjct: 244 SSIIQYIRTFFLDKSFMEVETPIL-ASVAGGAVARPFETSATEFPDRPLSLRIAPELWLK 302

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            L+  GFD+ F+I   FR+E       P EF   +   +F + + +++  E++  G+ + 
Sbjct: 303 RLVVGGFDKVFEIGQSFRNEGLDKTHNP-EFTTCEFYHAFADLETLISLTESIFTGLSQH 361

Query: 264 FSNGN 268
             N N
Sbjct: 362 VHNLN 366



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +A Q G+PP GG   G+DR+VML  GA  + +V  F
Sbjct: 532 QALQWGLPPTGGWGCGVDRLVMLFTGAGRIGDVLSF 567


>gi|301111548|ref|XP_002904853.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262095183|gb|EEY53235.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 215

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 31/157 (19%)

Query: 125 RFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           R   R LDL   T     +KR +  +    R  +I  +F+E  TP L             
Sbjct: 64  RLNSRPLDLH--TPANQCIKRIQAAVGQLFRAFLIQRDFVETHTPKLDV----------- 110

Query: 183 PSRVNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                      L Q+PQ+YKQ+   A+G +R F+I P F  E+  + R   EF  LD+EM
Sbjct: 111 ----------ILAQSPQKYKQMACAAAGLERVFEIGPVFCAENSSTHRHMCEFVGLDLEM 160

Query: 242 SFVEQ-DDILNTMEN----VLRGVFEEFSNGNTVSNN 273
           +  E   ++L    +    +  G+ E ++N     NN
Sbjct: 161 TIKEHYHEVLEVFSDLYIYIFDGLKERYANELATINN 197


>gi|262041444|ref|ZP_06014647.1| lysine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259041238|gb|EEW42306.1| lysine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 312

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 16/157 (10%)

Query: 152 MRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
           MR  M+A  F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  G
Sbjct: 1   MRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGG 58

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------E 263
           F+R F+I   FR+E       P EF  +++ M++ +  D++   E++ R + +      E
Sbjct: 59  FERVFEINRNFRNEGISVRHNP-EFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKTE 117

Query: 264 FSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295
              G+ V      F ++   +AI+++   T+  DL N
Sbjct: 118 VPYGDQVFDFGKQFEKLTMREAIKKHRPETNMADLDN 154



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 271 ALEYGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 306


>gi|255024380|ref|ZP_05296366.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 230

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 29/41 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            A + G+PP GG+  GIDR+VMLL  A ++R++ LFP  ++
Sbjct: 188 EALEYGLPPTGGLGIGIDRLVMLLTNAPSIRDILLFPTMKH 228


>gi|241957335|ref|XP_002421387.1| lysine--tRNA ligase, putative; mitochondrial lysyl-tRNA synthetase,
           putative [Candida dubliniensis CD36]
 gi|223644731|emb|CAX40722.1| lysine--tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 535

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           I+ ++++I ++R  ++  +F+E  TPIL+   +   A  F+   +   G    L  AP+ 
Sbjct: 217 IIVKSKVIQAIRNFLLDRDFLEVQTPILSGQGTGANATPFVTKFK---GDPVHLRVAPEL 273

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           + + L+  GFDR F+I   FR+E       P EF   +   ++   D+++   E++   V
Sbjct: 274 WLKKLVIGGFDRVFEIGSNFRNEGIDMTHNP-EFSTCEFYQAYTSLDELMKMTEDMFGYV 332

Query: 261 FEEFSNGNTVSNNF 274
           F +      V+N F
Sbjct: 333 FAKLG----VTNKF 342



 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           RA + G+PP GG   GIDR+ ML+ GA  + +V  F
Sbjct: 491 RAMEYGLPPTGGWGCGIDRLAMLIAGANRIEDVLTF 526


>gi|170755098|ref|YP_001780236.1| asparaginyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169120310|gb|ACA44146.1| asparaginyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 463

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 121/306 (39%), Gaps = 55/306 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V+++GWV  VR      F+++ D   +   QV+       F+    +     + ++G++ 
Sbjct: 21  VKINGWVRTVRDSKNFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTSVEVEGIIQ 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                T NA       E+ A ++ I   +     P+  +R   E +R       LR  + 
Sbjct: 81  P----TPNAK---QPFEIKATRVSIEGKSS-TDYPLQKKRHTFEYLR---TIAHLRPRSN 129

Query: 139 HKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSRVN 187
             + V R R + +       +   F+  +TPI+T S  EGA +           +P +  
Sbjct: 130 AFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDLKNIP-KTE 188

Query: 188 QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +G       F+  P       QL     A  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 EGKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHASEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNFLRI 277
            EM+F E  D L+  E++++ V              F  F +        N V+++F RI
Sbjct: 249 PEMAFAELTDYLDNAEDMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDNVVNSDFKRI 308

Query: 278 CYDDAI 283
            Y +A+
Sbjct: 309 TYTEAV 314


>gi|299771104|ref|YP_003733130.1| lysyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298701192|gb|ADI91757.1| lysyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 509

 Score = 48.5 bits (114), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RD 179
            ++++ R+LDL   +   K    R +++  +R  +  E F+E  TP++    P GA  R 
Sbjct: 166 EVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLNNERFMEVETPMMHVI-PGGASARP 224

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++ 
Sbjct: 225 FETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEF 282

Query: 240 EMSFVEQDDILNTMENVL 257
             ++ +  D++   EN+L
Sbjct: 283 YQAYADYKDLMQLTENML 300



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 467 ALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFP 502


>gi|260776072|ref|ZP_05884967.1| asparaginyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260607295|gb|EEX33560.1| asparaginyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 492

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 109/275 (39%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV-------RSE 68
           V S V + GW+   R    GI FL I D             +CF+  ++V        +E
Sbjct: 42  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYNE 89

Query: 69  WVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
            VL +          TI  +   GQ  EL+A  ++++   E+    P+   R    SI +
Sbjct: 90  EVLKLTTGCSVEVTGTIVESPAKGQDFELAATDVKVVGWVEDADTYPMAKTRH---SIEY 146

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 147 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 206

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     +    Y +        L  SG            + +   P FR E+  +
Sbjct: 207 TLDMENLPRTEEGKVDYNEDFFGKETFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNT 266

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + +DI    E++L+ VF+
Sbjct: 267 SRHLAEFWMVEPEVAFADLEDIAKLSEDMLKYVFK 301


>gi|21672623|ref|NP_660690.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25009351|sp|Q8K9I7|SYN_BUCAP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|21623256|gb|AAM67901.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 466

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 65/312 (20%), Positives = 119/312 (38%), Gaps = 55/312 (17%)

Query: 17  VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC--- 72
           V + + + GWV   R    G  F+ + D   +  V    D       K +    + C   
Sbjct: 16  VNTPITIFGWVRSRRSSKSGFSFITVYDGSCLNSVQVVADKTLSNYYKDILHLTIGCSVT 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFL 131
           I G+++    +         + E+ A K ++L  +      P+  ++   E +R      
Sbjct: 76  ITGILILSIGDK-------QKYEIKATKFQVLGWIKNPDTYPISAKKHSLEYLR---EVA 125

Query: 132 DLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFL-------- 181
            LR  T    ++ R R  I  S+   +  + +    TPI+T  + EG  +          
Sbjct: 126 HLRSRTNLIGVIVRIRHHIFQSLHKFLNKQGYYWIPTPIITGLNTEGTGEMFRVSTMDMR 185

Query: 182 -VPSRVN-----QGSFYALPQAPQQYKQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPG 232
            +P ++N     +  F+          QL +   A    + +   P FR E+  + R   
Sbjct: 186 NIPKKINGSVDFKKDFFGKESFLTVSGQLNLEAYACSLSKVYTFGPTFRAENSNTSRHLA 245

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSNGNTV-------S 271
           EF+ L++E SF   D+IL   E++L+ +               + + + + +       S
Sbjct: 246 EFWMLEIESSFCNLDEILIFSEDMLKYICKSLLKYCINDIKFLKNYIDNDIINRLKKFLS 305

Query: 272 NNFLRICYDDAI 283
            NF+RI Y DAI
Sbjct: 306 VNFIRINYKDAI 317


>gi|326334559|ref|ZP_08200770.1| asparagine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325693328|gb|EGD35256.1| asparagine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 474

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 106/261 (40%), Gaps = 32/261 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV   R +    F+ + D   I   QVV + +    ++ K + +   + ++G V+
Sbjct: 16  ITLKGWVRTFRSNR---FIALNDGSTIENIQVVVDFEHTDEQLLKRITTGAAIEVNGKVV 72

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
               +        GQ IE+ A +I IL        P+  +R   E +R +   L +R + 
Sbjct: 73  ESQGK--------GQTIEVQASQITILGDCNPDEYPIQPKRHSLEFLR-ENAHLRVRTNV 123

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R+ +  ++   +    F   +TPI+T S  EGA +    + ++  +     + 
Sbjct: 124 FGAIMRVRSTLAYAIHRYLQDHGFFYVNTPIITGSDAEGAGEMFRVTTLDAKNPPLTTEG 183

Query: 198 PQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              YK+                    A    + +   P FR E+  + R   EF+ ++ E
Sbjct: 184 EVDYKKDFFGRETNLTVSGQLEGETFAMSLGKIYTFGPTFRAENSNTSRHLAEFWMIEPE 243

Query: 241 MSFVEQDDILNTMENVLRGVF 261
           M+F +  D +N  E+ ++ V 
Sbjct: 244 MAFYDLIDNMNLAEDFIKEVL 264


>gi|225076424|ref|ZP_03719623.1| hypothetical protein NEIFLAOT_01469 [Neisseria flavescens
           NRL30031/H210]
 gi|224952272|gb|EEG33481.1| hypothetical protein NEIFLAOT_01469 [Neisseria flavescens
           NRL30031/H210]
          Length = 228

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  E   + F      K+  ++    +   Y RA + G+PP 
Sbjct: 137 RFELFVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 196

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 197 GGCGIGIDRLVMLLTDSQTIRDVILFP 223


>gi|323441222|gb|EGA98900.1| lysyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 51

 Score = 48.1 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 11  ALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 46


>gi|295136357|ref|YP_003587033.1| asparaginyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294984372|gb|ADF54837.1| asparaginyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 480

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 104/260 (40%), Gaps = 31/260 (11%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSEWVLCIDGLVMS 79
           ++SGWV   R +    F+ + D   I  +    D   F  E  K +     + + G++  
Sbjct: 20  KVSGWVRSFRSNR---FVALNDGSTINNIQCVIDFEKFNPETLKRITVGAAISVKGILKE 76

Query: 80  RSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              +         ++E+  + + IL  A  EE+ L +   + +      +   L +R +T
Sbjct: 77  SEGKQ-------QRVEIDVKAVSILGDANPEEVKLTILSPKRHSLEKLREQAHLRVRTNT 129

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR--------DFLVPSRVNQG 189
               +  R+++  ++       NF   +TPI+T S  EGA         D   P +   G
Sbjct: 130 FGAIMRVRSKLSFAVHSYFQQNNFYYVNTPIITGSDAEGAGEMFKVTNFDLKNPPKNEDG 189

Query: 190 S------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           S      F+          QL     A G  + +   P FR E+  + R   EF+ ++ E
Sbjct: 190 SIDYKKDFFGKETNLTVSGQLEGETYALGLGQIYTFGPTFRAENSNTSRHLAEFWMIEPE 249

Query: 241 MSFVEQDDILNTMENVLRGV 260
           ++F + D  ++  E+ ++ V
Sbjct: 250 IAFCDLDGNMDLAEDFIKYV 269


>gi|254572159|ref|XP_002493189.1| Lysyl-tRNA synthetase [Pichia pastoris GS115]
 gi|238032987|emb|CAY71010.1| Lysyl-tRNA synthetase [Pichia pastoris GS115]
 gi|328352796|emb|CCA39194.1| lysyl-tRNA synthetase, class II [Pichia pastoris CBS 7435]
          Length = 588

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 115/252 (45%), Gaps = 15/252 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPDSACFEIAKS---VRSEWVLCIDGL 76
           V ++G +H  R  G  +   +    G+  Q++A    A  +  K    +R   ++ + G 
Sbjct: 125 VSVAGRIHAKRESGSKLKFYVLHGEGVQVQIMAQAQDADGDYEKMHELLRRGDIIGVTGY 184

Query: 77  VMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRR 135
                  T  A    G+I + A+K+++L+     LP   FG ++  +  R++ R+LDL  
Sbjct: 185 ----PGRTSPAKGGEGEISVFARKVKLLTPCLHMLPTDHFGFKD--QEARYRKRYLDLIM 238

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           +   ++  K R++II+ +R      +FIE  TP++   +    A+ F+          Y 
Sbjct: 239 NDATRDRFKIRSKIISYIRRFFDERDFIEVETPMMNVIAGGATAKPFITHHNDLNIDMY- 297

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  AP+ + + L+  G DR ++I   FR+E       P EF   +   ++ +  D++ T 
Sbjct: 298 MRVAPELFLKELVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMETT 356

Query: 254 ENVLRGVFEEFS 265
           E +   + +E +
Sbjct: 357 ELLFSEMVKEIT 368



 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  +  +REV LFP
Sbjct: 537 ALEYGLPPTAGWGCGIDRLAMFLTNSNTIREVLLFP 572


>gi|320590914|gb|EFX03355.1| asparaginyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 573

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 22/152 (14%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV-----------------PSRVN 187
           R+ +I+S+     + +F++   P++T+S  EGA +                    PS+  
Sbjct: 206 RSNVISSLDRFFTSRDFVQTHPPLITSSDCEGAGEVFTVSAASSASSSSSSSSNSPSKSG 265

Query: 188 QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              F+  P+      QL    +A      + ++P FR E+  + R   EFY L+ E+ FV
Sbjct: 266 DAHFFRSPKYLTVSTQLHLEALAQAVGSVWTLSPTFRAEESDTPRHLSEFYMLEAEVCFV 325

Query: 245 EQ-DDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           ++ D +++ +E++LR V  +   GN V++  L
Sbjct: 326 DRLDGVMDLVEDMLRAVAADV-QGNRVADELL 356



 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 15/102 (14%)

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVEN------------RFGGLYRA 528
           +DL+   F EIA G +R H    ++ A  + G+  +V E+                    
Sbjct: 473 FDLLVPEFCEIAGGSMREHRLPELVAAMRSRGM--QVAEDGAPSGQDGSSSSDLDWYVDL 530

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            + G PPHGG   G DR++  L G + +R+   FP     CD
Sbjct: 531 RRWGCPPHGGFGVGFDRLLCYLSGVQTIRDTVAFPRWFGRCD 572


>gi|284799900|ref|ZP_06390412.1| lysine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284796561|gb|EFC51908.1| lysine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 214

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++L   G E+A+G    +  E   + F      K+  ++    +   Y RA + G+PP 
Sbjct: 123 RFELFVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPT 182

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 183 GGCGIGIDRLVMLLTDSQTIRDVILFP 209


>gi|170076670|ref|YP_001733308.1| lysyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|169884339|gb|ACA98052.1| lysyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 538

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/269 (20%), Positives = 117/269 (43%), Gaps = 28/269 (10%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-------- 53
            +Y+    G+    +V   V ++G +   R  G + F  ++D  G  Q+  +        
Sbjct: 46  EKYKDIEAGE----EVEDTVSIAGRILARRVFGKLAFFSLQDETGTIQLYLDKKLINGGM 101

Query: 54  PD--SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
           PD   A   + K      ++ + G++  +  E    +I   Q  +  + +        LP
Sbjct: 102 PDLEGAFNHLKKLTDVGDIIGVKGII--KRTEKGELSIKVSQFAMLTKSL--------LP 151

Query: 112 LPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP           R++ R++DL  +  + +   +R +I  ++R  +   +F+E  TP+L 
Sbjct: 152 LPDKWHGLTDIEKRYRQRYVDLIINPQVKETFRRRAKITAAIRRYLEDRDFLEIETPVLQ 211

Query: 171 ASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
           A +    AR F+          Y L  A + + + L+  GF+R F++   FR+E   +  
Sbjct: 212 AEAGGAEARPFITHHNTLDMPLY-LRIATELHLKRLVVGGFERVFELGRIFRNEGVSTKH 270

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            P EF  +++  ++ +  D+++  E+++R
Sbjct: 271 NP-EFTSIEVYQAYGDYFDMMDLTEDLIR 298



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP  G+  GIDR+VMLL  A+++R+V  FP+ ++
Sbjct: 463 ALEYGMPPTVGLGIGIDRLVMLLTNAESIRDVIAFPLLKD 502


>gi|161614759|ref|YP_001588724.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|161364123|gb|ABX67891.1| hypothetical protein SPAB_02511 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 445

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 108/274 (39%), Gaps = 54/274 (19%)

Query: 23  LSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + GWV   R    GI FL + D             +CF+  ++V +  +   +  V+  +
Sbjct: 1   MRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNEEVLHLT 48

Query: 82  AETINANIITGQI----------ELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRF 130
             T  + ++TG++          E+ A K+E+    E+    P+  +R    SI +    
Sbjct: 49  --TGCSVVVTGKVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRH---SIEYLREV 103

Query: 131 LDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             LR  T     V R R  +  ++      + F   STP++TAS  EGA +     RV+ 
Sbjct: 104 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF---RVST 160

Query: 189 GSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                LP+  Q                    Q      A    + +   P FR E+  + 
Sbjct: 161 LDLENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTS 220

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           R   EF+ L+ E++F + +D     E +L+ VF+
Sbjct: 221 RHLAEFWMLEPEVAFADLEDNARLAEAMLKYVFK 254



 Score = 37.7 bits (86), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 360 DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 414

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 415 LGFERLIAYVTGVQNVRDVIPFPRT 439


>gi|332663266|ref|YP_004446054.1| Lysyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332332080|gb|AEE49181.1| Lysyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 510

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 127/305 (41%), Gaps = 49/305 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKSVRSEWV-----L 71
           V L+G +  VR  G + F +++D  G  Q+  +     D   F++   V    +     +
Sbjct: 54  VALAGRMMVVREKGKVTFAELQDSSGRIQLYISRSDIADGENFDLYDVVLKRLLDFGDYI 113

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF--------GEREY--- 120
            + G V              G+I L  + + +LS +   PLP+         GE E    
Sbjct: 114 GVKGFVFRTR---------MGEITLHVKSLTLLSKSLR-PLPMVKTRVIEATGETEVYDA 163

Query: 121 ---PESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
              PE  R + R++DL  +   K   + R+RII++MR     + ++E  TPIL       
Sbjct: 164 FTDPEQ-RHRMRYVDLTVNPQFKAAFITRSRIISAMRRFFDDKGWLEVETPILQPIHGGA 222

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F           Y +  A + Y + L+A GFD  ++I   FR+E       P EF 
Sbjct: 223 AARPFQTHHNTLDMPLY-MRIANELYLKRLIAGGFDGVYEIGKMFRNEGMDRTHNP-EFT 280

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV----------SNNFLRICYDDAIRR 285
            +++ +++ +   ++  +E  L  +    ++ N +          +  + R+   D+I+ 
Sbjct: 281 AMEIYVAYKDYYWMMEMVEQCLEHIARAINDNNPLIKFDQHEINYAGPYRRLTMYDSIKE 340

Query: 286 Y-GTD 289
           Y G D
Sbjct: 341 YTGAD 345



 Score = 41.6 bits (96), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 22/37 (59%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  GIDR+ M +     ++EV  FP
Sbjct: 466 RALEYGMPPTSGLGIGIDRLTMFMTNNHTIQEVLFFP 502


>gi|302497507|ref|XP_003010754.1| hypothetical protein ARB_03456 [Arthroderma benhamiae CBS 112371]
 gi|291174297|gb|EFE30114.1| hypothetical protein ARB_03456 [Arthroderma benhamiae CBS 112371]
          Length = 575

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 32/196 (16%)

Query: 94  IELSAQKIEILSVA-EELPLPVF-GEREYPESI-----------------RFKYRFLDLR 134
           +EL   KI ++S A   LP+ V   ER  PES                  R   R LDL+
Sbjct: 182 MELHITKIYMISEAIPMLPMQVKDAERPPPESTEEGLVDTDGTPIVTLKTRLDNRILDLQ 241

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECS-----TPILTASSPEGARDFLVPSRVNQG 189
            +T    +      I+S   ++ +E  ++       T  +T ++ EG       S   + 
Sbjct: 242 TETSQAIMA-----ISSGVAQLFSEYMLKSGSRWIFTSKITGAATEGGSGVFEISYFKRK 296

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
           ++  L Q+PQ  KQ+ +A      F+I P FR ED  + R   EF  LD E +F +   +
Sbjct: 297 AY--LSQSPQLGKQMCIAGDMMSVFEIGPVFRAEDSNTHRHLTEFIGLDFERTFQKHYHE 354

Query: 249 ILNTMENVLRGVFEEF 264
           +L+  EN+L  +  E 
Sbjct: 355 VLDFAENLLVFILSEL 370


>gi|119492003|ref|XP_001263496.1| asparaginyl-tRNA synthetase Slm5, putative [Neosartorya fischeri
           NRRL 181]
 gi|119411656|gb|EAW21599.1| asparaginyl-tRNA synthetase Slm5, putative [Neosartorya fischeri
           NRRL 181]
          Length = 549

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 106/262 (40%), Gaps = 43/262 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE----WVLCID 74
           ++++G+V  VR      F +I D   I   Q    P  A  E++     E    W  C  
Sbjct: 50  IKINGFVRSVRKQKRFAFAEITDGSTIEPLQAFLKPAQAA-ELSTGTAVEISGLWKACPP 108

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G   S               EL   +++++  AE    P+  +   P+ +R       LR
Sbjct: 109 GKEQSH--------------ELQTTEVKVVGQAEPETYPIQKKYHSPDFLR---SIPHLR 151

Query: 135 RDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGA--------RDF 180
             T   +++ R R      + N  R       +++   P++T+S  EGA        R+ 
Sbjct: 152 LRTPFNSVLSRFRSECLYQLGNVFRDAPTG-GYVQVQPPLITSSDCEGAGETFTVLPRET 210

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           ++  +     F+  P+      QL +   A+     + I+P FR E   + R   EFY L
Sbjct: 211 IMDPKSEGNHFFRAPKYLTVSSQLHLEAYAAELGNVWAISPTFRAEKSDTPRHLSEFYML 270

Query: 238 DMEMSFVEQ-DDILNTMENVLR 258
           + EM+F++  D + + +E V+R
Sbjct: 271 EAEMNFMDDLDSLTDAVEYVVR 292


>gi|321223326|gb|EFX48395.1| Asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
          Length = 445

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 107/273 (39%), Gaps = 54/273 (19%)

Query: 23  LSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + GWV   R    GI FL + D             +CF+  ++V +  +   +  V+  +
Sbjct: 1   MRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNEEVLHLT 48

Query: 82  AETINANIITGQI----------ELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRF 130
             T  + ++TG++          E+ A K+E+    E+    P+  +R    SI +    
Sbjct: 49  --TGCSVVVTGKVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRH---SIEYLREV 103

Query: 131 LDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             LR  T     V R R  +  ++      + F   STP++TAS  EGA +     RV+ 
Sbjct: 104 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMF---RVST 160

Query: 189 GSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                LP+  Q                    Q      A    + +   P FR E+  + 
Sbjct: 161 LDLENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTS 220

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           R   EF+ L+ E++F + +D     E +L+ VF
Sbjct: 221 RHLAEFWMLEPEVAFADLEDNARLAEAMLKYVF 253



 Score = 37.7 bits (86), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 360 DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 414

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 415 LGFERLIAYVTGVQNVRDVIPFPRT 439


>gi|145530345|ref|XP_001450950.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418583|emb|CAK83553.1| unnamed protein product [Paramecium tetraurelia]
          Length = 469

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 101/277 (36%), Gaps = 45/277 (16%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEI 61
           YR     + G   +G  V ++GW   VR    + F+++ D   +G  Q+V     A FE 
Sbjct: 6   YRIQELLNAGEGYIGQTVTVAGWARTVRDQKNLCFIELNDGTSFGGLQIVVEDKIANFEQ 65

Query: 62  AKSVRSEWVLCIDGLVMSRSAETI---NANIITGQIELSAQKIEILSVAEELPLPVFGER 118
               +       D      S + I   NA +I GQ +            EE P+    ++
Sbjct: 66  VAKTKYRIFTQSDRKHCKESCQRIIDRNAFVIIGQAD-----------PEEYPMAKGVQK 114

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEG 176
             PE++R K     LR      + V R R   +    +  +N   +   TPI+T S  EG
Sbjct: 115 --PETLRQKAH---LRPRGNFFSAVTRIRNNLAYATHVFFQNNGCLYIHTPIITGSDCEG 169

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQL---------LMASG----------FDRYFQIA 217
           A +    S +       +PQ   +             L  SG              +   
Sbjct: 170 AGEMFRISTIFDNDVSKIPQIKGKVDTTQDFFKKEVNLTVSGQLQVEHFCISMSNVYTFG 229

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           P FR E   + R   EF+ ++ E +F    D+ + ME
Sbjct: 230 PTFRAEKAHTHRHLAEFWMIEPEFAFA---DLFDNME 263



 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G  R    +V+ Q     G+  E     +G      + G  PH G   G +R+VM+
Sbjct: 392 ELIGGSQREERYDVLAQRIKECGLKLE----DYGPYMDLRKYGTVPHCGFGLGFERLVMM 447

Query: 550 LLGAKNVREVSLFP 563
           + G +N+R+V  FP
Sbjct: 448 VTGVENIRDVIPFP 461


>gi|254520508|ref|ZP_05132564.1| asparaginyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226914257|gb|EEH99458.1| asparaginyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 464

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 110/267 (41%), Gaps = 40/267 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           +++SGW+  +R      F+++ D   +   QVV +     F +++K   S  +  I  LV
Sbjct: 22  IKISGWIRTLRASNAFGFIEVNDGTFFKNVQVVFDNKLDNFKDVSKLPISSSITVIGTLV 81

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A++I I  +++    P+  +R   E +R       LR  +
Sbjct: 82  ATPEAKQ--------PFEIQAKEIVIEGLSQS-DYPLQKKRHTFEYLR---TIAHLRPRS 129

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
              + V R R + +       +   F+   TP++T S  EGA +     RV     + +P
Sbjct: 130 NAFSAVFRVRSVAAYAIHKFFQERGFVYTHTPLITGSDCEGAGEMF---RVTTLDLHNVP 186

Query: 196 QAPQ---QYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           +  +    +KQ                    A  F   +   P FR E+  + R   EF+
Sbjct: 187 KTEEGAIDFKQDFFGKESNLTVSGQLNAECYALAFRNVYTFGPTFRAENSNTARHAAEFW 246

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFE 262
            ++ E++F +  D +   E++L+ V E
Sbjct: 247 MIEPEIAFADLQDDMELAEDMLKYVLE 273


>gi|78223046|ref|YP_384793.1| tRNA synthetase, class II (D, K and N) [Geobacter metallireducens
           GS-15]
 gi|78194301|gb|ABB32068.1| tRNA synthetase, class II (D, K and N) [Geobacter metallireducens
           GS-15]
          Length = 307

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 17/159 (10%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQA 197
           H  +  R RII  +R   I   ++E  TP+ + A +PE   D  VP+    G F  L  +
Sbjct: 11  HGALRARARIIQEIRRFFIEGGYLEVETPLRIPACAPESHID-PVPA---DGWF--LQTS 64

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+   + ++A+G++R FQI+ C+R  +     +P EF  L+   +  +   +++  E ++
Sbjct: 65  PEICMKRMLAAGYERLFQISHCWRAGERGRMHVP-EFTMLEWYRAGTDYRGVMDETELLI 123

Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           R V E    G  +S           + RI   DA  RYG
Sbjct: 124 RFVAEGAGFGGPLSFRGKEIDITAVWERITVRDAFVRYG 162


>gi|308272072|emb|CBX28680.1| Asparaginyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 460

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 104/260 (40%), Gaps = 35/260 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVA-NPDSACFEIAKSVRSEWVLCIDGLV 77
           + ++GWV   R   G  F+++ D   +   Q++A N      +I K      V     L 
Sbjct: 19  IVVNGWVRTKRDSSGFSFIEVNDGSCLKNIQIIAENKLGNYIDIKKLSTGSAVTVYGDLA 78

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            S+          +GQ  E+ A KI+I+S+A +   P+  +R   E +R       LR  
Sbjct: 79  ESKG---------SGQKWEVLATKIDIISIASD-SYPLQKKRHTDEYLR---TIAHLRPR 125

Query: 137 TLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGARDFLVPSRVNQ------ 188
           T     V R R   S         + F    TPI+T S  EGA +    + ++Q      
Sbjct: 126 TNKYGAVFRIRSELSFAIHKFFRDKGFKYIHTPIITGSDCEGAGEMFKVTVMDQEKAINK 185

Query: 189 -------GSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+  P +     QL   ++A      +   P FR E+  + R   EF+ ++
Sbjct: 186 NGQADDLQDFFGKPASLTVSGQLSAEMLALALGDVYTFGPTFRAENSNTRRHAAEFWMIE 245

Query: 239 MEMSFVEQDDILNTMENVLR 258
            EM F + +D ++  E  ++
Sbjct: 246 PEMVFCDINDDMDLGEQTIK 265



 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G  R    +V+       G+ KE     +     + + G  PH G   G +R++ML
Sbjct: 383 ELIGGSQREERLDVLELRMEECGLLKE----NYWWYLDSRRFGTVPHSGFGLGFERLLML 438

Query: 550 LLGAKNVREVSLFPMS 565
           + G KN+R+V  FP +
Sbjct: 439 VTGIKNIRDVIPFPRT 454


>gi|239629035|ref|ZP_04672066.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519181|gb|EEQ59047.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 463

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/304 (20%), Positives = 114/304 (37%), Gaps = 51/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V + GWV  +R      F+ + D  ++   QVV +   + F EI+K      ++    LV
Sbjct: 21  VSIGGWVRSLRDSKAFGFIVVSDGSYFETLQVVYHDSLSNFAEISKMNVGTAIIVKGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A ++ +   A     P+  +R   E +R     L  R +T
Sbjct: 81  ATPQAKQ--------PFEIQATEVTVEG-ASASDYPLQKKRHSFEYLR-TISHLRPRTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+ I  ++       +F+   TP++T S  EGA +    + ++  +       
Sbjct: 131 FQAVFRVRSLIAYAIHQYFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDLNNIPKTEDG 190

Query: 198 PQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              + Q                    A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 191 KVDFSQDFFNKATNLTVSGQLNAETYAMAFRNVYTFGPTFRAENSNTARHAAEFWMIEPE 250

Query: 241 MSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNFLRICY 279
           M+F + DD +   E +L+ +              F +F +        N +++ F  I Y
Sbjct: 251 MAFADLDDDMRLAEGMLKYIIRFVLEHAPEEMNFFNQFVDKGLLERLNNVLNSEFGHITY 310

Query: 280 DDAI 283
            DA+
Sbjct: 311 TDAV 314



 Score = 38.9 bits (89), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + ++     +G+ KE  +  F    R +  G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDNLDKLVARMDELGLRKE--DYDFYLDLRKY--GSTRHAGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMGNIRDVVPFPRTVNNCEL 463


>gi|193217041|ref|YP_002000283.1| lysyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|226737094|sp|B3PNH7|SYK_MYCA5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|193002364|gb|ACF07579.1| lysyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 490

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 99/207 (47%), Gaps = 7/207 (3%)

Query: 63  KSVRSEWVLCIDGLVMSR--SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           K++  E ++ +  L +    SA  + +   TG++ + A  I++L+ +  +PLP       
Sbjct: 89  KALNEETLIILKQLDLGDIISATGLVSKTHTGELMIKASDIKLLTKSL-IPLPDKFHGLV 147

Query: 121 PESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGAR 178
               R+++R++D +  + + K  + R++II  +R      NF+E  TP+L        A+
Sbjct: 148 DREDRYRHRYVDTIVNEDVKKTFILRSKIIKLIREYFDNLNFLEVDTPVLQPILGGAAAK 207

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+        +FY L  A +   + L+  GF+R ++I   FR+E   +   P EF  ++
Sbjct: 208 PFITYYNALNCNFY-LRIATELPLKKLIVGGFERVYEIGRIFRNEGIDTTHNP-EFTSIE 265

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFS 265
              ++ +   ++   E V R + E+ +
Sbjct: 266 FYEAYSDMWGMMERTEGVFRYIAEKLN 292



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + GMPP GG   GI+R++M      ++REV LFP
Sbjct: 446 KALEYGMPPTGGCGIGIERLIMFFTENDSIREVLLFP 482


>gi|323342365|ref|ZP_08082597.1| lysine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463477|gb|EFY08671.1| lysine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 494

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GGI  G+DR++MLL  + ++R+V LFP
Sbjct: 454 ALEYGMPPTGGIGIGLDRLIMLLTDSASIRDVLLFP 489


>gi|332373956|gb|AEE62119.1| unknown [Dendroctonus ponderosae]
          Length = 461

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 101/251 (40%), Gaps = 32/251 (12%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L    +G  V + GW+  +R    + FLDI D        + P S   +I  S ++   +
Sbjct: 26  LNDDKLGQHVFIQGWIKALRKQKEVTFLDINDG-------STPKS--LQIVSSKKNVPKV 76

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY-PESIRFKYR 129
            +   V   SA  +      GQ E+SA  ++++   + E   P    + Y P+ +R +Y 
Sbjct: 77  TVGASV---SASGLLKQTAKGQNEVSATSVKMIGECDLEKGYPFAPRKRYEPQYVR-EYL 132

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--LVPSRVN 187
            L  R  T    +  R     ++   +   ++I   TPI+TA+  EGA +   +VP    
Sbjct: 133 HLRPRTKTFASVLRLRHAAYLAIHNYLHQNHYINIHTPIITANDCEGAGETFKVVPDNEQ 192

Query: 188 QGSFYALPQAP--QQY---KQLLMASG----------FDRYFQIAPCFRDEDPRSDRLPG 232
                A    P    Y   K  L  SG           ++ +   P FR E+  S     
Sbjct: 193 LLKNMAKKDVPFDNAYFDTKAYLTVSGQLHLEAAAHALNKVYCFGPTFRAENSISRFHLS 252

Query: 233 EFYQLDMEMSF 243
           EFY L++E +F
Sbjct: 253 EFYMLELEQAF 263


>gi|318042860|ref|ZP_07974816.1| lysyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 502

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 4/68 (5%)

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R  +   M +  +    ++EV E+      +A + GMPP GG+  GIDR+VMLL  + ++
Sbjct: 428 RQRLEAQMARKAAGDDEAQEVDED----FIQALEVGMPPTGGLGIGIDRLVMLLTDSASI 483

Query: 557 REVSLFPM 564
           R+V  FP+
Sbjct: 484 RDVIAFPL 491



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 88/196 (44%), Gaps = 23/196 (11%)

Query: 125 RFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           R++ R+LDL    DT  +   +R   ++++R  +    F+E  TP+L  S P GA     
Sbjct: 157 RYRQRYLDLIVSPDT-RETFRRRALAVSAIRRWLDERGFLEIETPVLQ-SVPGGADARPF 214

Query: 183 PSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
            +  N       L  A + + + L+  GF+R +++   FR+E   +   P EF  +++  
Sbjct: 215 ETHHNALDLPLTLRIATELHLKRLVVGGFERVYELGRIFRNEGISTRHNP-EFTSIEVYQ 273

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---II 298
           ++ + +D+++  E ++  V ++     T+              RY  ++ DL  P   + 
Sbjct: 274 AYADYNDMMDLTEQLIAHVCQQVCGSTTI--------------RYQGNEIDLTPPWRRVT 319

Query: 299 MHNVTEHFVHSEFRVF 314
           MH + +     +F  F
Sbjct: 320 MHELVQEATGLDFGAF 335


>gi|317495481|ref|ZP_07953849.1| lysyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914295|gb|EFV35773.1| lysyl-tRNA synthetase [Gemella moribillum M424]
          Length = 499

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 459 SLEYGMPPTGGLGIGIDRLVMLLTNSASIRDVLLFP 494


>gi|237751829|ref|ZP_04582309.1| lysyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229373195|gb|EEO23586.1| lysyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 506

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 18/215 (8%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI-AKSVRSEWVL 71
            D  S + + G V  +R  G   F+ I D Y I Q+    N     F+I  K++    ++
Sbjct: 54  KDEDSKLWVKGRVKFLRLMGKASFIKIEDEYAILQIYFSQNELGDLFKILKKNLEVGDIV 113

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G               TG++ L A + +IL+ A  +PLP          +R++ R+L
Sbjct: 114 NVYGFPFVTK---------TGELSLHALEFKILTKAI-VPLPEKFHGLSDIELRYRQRYL 163

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQ 188
           DL  +   K   + R+ I++ +R     + F+E  TP+L    P GA  R F+       
Sbjct: 164 DLIVNREVKETFRMRSAIVSCVRKFFENKGFLEVETPML-HPIPGGANARPFITHHNALD 222

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
              Y L  AP+ Y + L+  GF+  F+I   FR+E
Sbjct: 223 VERY-LRIAPELYLKRLVVGGFEAVFEINRNFRNE 256



 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 4/45 (8%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF----PMSQNF 568
           A   GMPP  G   GIDR+VMLL   K++++V LF    P+S+N+
Sbjct: 453 ALGHGMPPTAGEGIGIDRLVMLLTNNKSIKDVLLFPAMKPVSENY 497


>gi|220905826|ref|YP_002481137.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|219862437|gb|ACL42776.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 509

 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  A ++R+V  FP+
Sbjct: 468 ALEHGMPPTGGLGIGIDRLVMLLTNAASIRDVIAFPV 504



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 52/242 (21%), Positives = 110/242 (45%), Gaps = 12/242 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L+G +   R  G + F  ++D  G  Q+          +A  + +E    +D L+ + 
Sbjct: 68  VGLAGRIMARRFMGKLAFATLQDETGTIQLYLEKQ----RLADHMDAEAFKRLDKLMDTG 123

Query: 81  SAETINANII---TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
               +   +     G++ ++  +  IL+ +  LPLP           R++ R++DL  + 
Sbjct: 124 DIVGVRGTVKRTEKGELSIAVSEYAILTKSL-LPLPDKWHGLTDVEKRYRQRYVDLIVNP 182

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALP 195
            + +   +R  I  ++R  +  ++FIE  TP+L   +    AR F+      +   Y L 
Sbjct: 183 EVRETFRRRALITAAIRRYLDQQDFIEIETPVLQLEAGGAEARPFITYHNTLEMQMY-LR 241

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + + + L+  GF++ F++   FR+E   +   P EF  +++  ++ +  D++   EN
Sbjct: 242 IATELHLKRLIVGGFEKVFELGRVFRNEGISTRHNP-EFTTIEIYQAYADYQDMMALTEN 300

Query: 256 VL 257
           ++
Sbjct: 301 LI 302


>gi|297284497|ref|XP_002802605.1| PREDICTED: lysyl-tRNA synthetase isoform 2 [Macaca mulatta]
          Length = 424

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 75/163 (46%), Gaps = 6/163 (3%)

Query: 122 ESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--R 178
           +  R++ R+LDL   D + +  + R++++  +R  +    F+E  TP++    P GA  +
Sbjct: 93  KETRYRQRYLDLILNDFVRQKFIIRSKMVTYIRSFLDELGFLEIETPMMNII-PGGAVAK 151

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +
Sbjct: 152 PFITYHNELDMNLY-MRIAPELYHKILVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCE 209

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
             M++ +  D++   E ++  +  +    N       R   DD
Sbjct: 210 FYMAYADYHDVMEITEKMVSALGMKLPETNLFETEETRKILDD 252



 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   G+DR+ M L  + N++EV LFP
Sbjct: 363 ALEYGLPPTGGFGMGLDRVAMFLTDSNNIKEVLLFP 398


>gi|156934577|ref|YP_001438493.1| asparaginyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|156532831|gb|ABU77657.1| hypothetical protein ESA_02411 [Cronobacter sakazakii ATCC BAA-894]
          Length = 441

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 102/254 (40%), Gaps = 41/254 (16%)

Query: 42  RDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI------- 94
           RD       +A  D +CF+  ++V +  +   +  V+  +  T  + I+TG++       
Sbjct: 5   RDSKAGISFLAVYDGSCFDPIQAVINNSLPNYNEEVLHLT--TGCSVIVTGKVVESPGEG 62

Query: 95  ---ELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR--I 148
              EL A ++E+   V +    P+  +R    SI +      LR  T     V R R  +
Sbjct: 63  QSFELQATQVEVTGWVDDPDTYPMAAKRH---SIEYLREVAHLRPRTNLIGAVARVRHTL 119

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ--------- 199
             ++      + F   STP++TAS  EGA +     RV+      LP+  Q         
Sbjct: 120 AQALHRFFHEQGFFWVSTPLITASDTEGAGEMF---RVSTLDLENLPRDAQGKIDFDKDF 176

Query: 200 -----------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
                      Q      A    + +   P FR E+  + R   EF+ L+ E++F   +D
Sbjct: 177 FGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLND 236

Query: 249 ILNTMENVLRGVFE 262
           +    E +L+ VF+
Sbjct: 237 VAGLAEAMLKYVFK 250


>gi|15828873|ref|NP_326233.1| lysyl-tRNA synthetase (lysine--tRNA ligase) (LysRS) [Mycoplasma
           pulmonis UAB CTIP]
 gi|39932449|sp|Q98QG4|SYK2_MYCPU RecName: Full=Lysyl-tRNA synthetase 2; AltName: Full=Lysine--tRNA
           ligase 2; Short=LysRS 2
 gi|14089816|emb|CAC13575.1| LYSYL-TRNA SYNTHETASE (LYSINE--TRNA LIGASE) (LYSRS) [Mycoplasma
           pulmonis]
          Length = 491

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+VMLL   +++REV LFP
Sbjct: 449 ALEYGLPPAGGCGIGIDRLVMLLTQKESIREVILFP 484



 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 4/142 (2%)

Query: 125 RFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV 182
           R++ R+LDL  +   K I   RT+II+ +R     +NF+E  TP+L +      AR F  
Sbjct: 155 RYRKRYLDLISNPNIKEIFWTRTKIISKIREFFDKQNFMEVETPMLHSILGGASARPFKT 214

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  SF          K+LL+  G DR ++I   FR+E   +   P EF  ++   +
Sbjct: 215 YHNSLSSSFNLRIATELPLKKLLVG-GIDRVYEIGRIFRNEGIDTTHNP-EFTSIEFYQA 272

Query: 243 FVEQDDILNTMENVLRGVFEEF 264
           +   + ++   EN+++ + +E 
Sbjct: 273 YSNLEIMMEQTENLIKFIAKEL 294


>gi|322514441|ref|ZP_08067483.1| asparagine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322119648|gb|EFX91710.1| asparagine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 467

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 117/288 (40%), Gaps = 38/288 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D   +   Q + N D  
Sbjct: 1   MSKFPTVSEILSGKVAVGEEVAVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINKDLV 60

Query: 58  CF--EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLP 113
            +  E+ + + +   + + G V+   AE        GQ +EL A ++E++   E+    P
Sbjct: 61  NYNDEVLR-LTAGCSVIVTGKVVESPAE--------GQAVELHATQVEVVGWVEDPDTYP 111

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTA 171
           +  +R    SI +      LR  T     V R R  +  ++      + F   +TP++TA
Sbjct: 112 MAAKRH---SIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITA 168

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYF 214
           S  EGA +    S ++  +     +    + Q        L  SG            + +
Sbjct: 169 SDTEGAGEMFRVSTLDLENLLRTDEGKVDFSQDFFGKESFLTVSGQLNGETYACALSKVY 228

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
              P FR E+  + R   EF+ ++ E +F    D     +++L+ VF+
Sbjct: 229 TFGPTFRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAKDMLKYVFK 276


>gi|304397090|ref|ZP_07378969.1| asparaginyl-tRNA synthetase [Pantoea sp. aB]
 gi|304355239|gb|EFM19607.1| asparaginyl-tRNA synthetase [Pantoea sp. aB]
          Length = 466

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 107/275 (38%), Gaps = 46/275 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V S V + GWV R R          RD       +A  D +CF   ++V +  +      
Sbjct: 16  VDSEVTVRGWV-RTR----------RDSKAGLSFIAVYDGSCFNPVQAVVNNSLNNYQDE 64

Query: 77  VMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFKY 128
           V+  +  T  + I+TG++  S    Q  EI + + E+   V     YP      SI +  
Sbjct: 65  VLRLT--TGCSVIVTGKVVASPGQGQAFEIQATSLEVVGWVEDPDSYPMAAKRHSIEYLR 122

Query: 129 RFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +     R   EN +   STP++TAS  EGA +     RV
Sbjct: 123 EVAHLRPRTNLIGAVARVRHTLAQALHRFFHENGYFWVSTPLITASDTEGAGEMF---RV 179

Query: 187 NQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +      LP+  Q                    Q      AS   + +   P FR E+  
Sbjct: 180 STLDMENLPRNDQGKVDFSEDFFGKEAFLTVSGQLNGETYASALSKIYTFGPTFRAENSN 239

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ L+ E++F   DD     E++L+ VF
Sbjct: 240 TSRHLAEFWMLEPEIAFATLDDAAALAESMLKYVF 274


>gi|260578976|ref|ZP_05846879.1| lysine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258602950|gb|EEW16224.1| lysine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 1050

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 13/93 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           R+ +    L+A      + EV E       RA +
Sbjct: 957  AERWDLVAWGVELGTAYSELTDPLEQRDRLEAQSLKAAGGDPEAMEVDE----AFLRALE 1012

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             GMPP GG+  G+DR++MLL G +++REV  FP
Sbjct: 1013 DGMPPTGGLGLGVDRLIMLLTG-RSIREVLSFP 1044



 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 29/205 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +R+SG +   R  G + F+D+RD  G  QV+   ++   E+A  +R+  +  +  +V +R
Sbjct: 634 LRISGRIVAKREFGAVSFIDLRDASGKCQVLV--EAPGEELAARMRALDLGDLIAVVGTR 691

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  +  TG+  L A+ IE L   +  PL   G      + R + R           
Sbjct: 692 ------GHSRTGEPSLLAEAIE-LEAKDLHPLTRRGAGIGEVNARLRAR----------- 733

Query: 141 NIVKRTRIINSMRCRMIAE-NFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAP 198
                  ++N+   R + +  F+E  TPIL        AR F   S       Y L  AP
Sbjct: 734 ------SVVNAAIRRTLGDLGFMEVETPILQRVHGGANARPFRTRSNAANQDLY-LRIAP 786

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDE 223
           + Y + L+  G ++ +++   FR+E
Sbjct: 787 ELYLKRLLTQGAEKVYELGRVFRNE 811


>gi|269128677|ref|YP_003302047.1| lysyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268313635|gb|ACZ00010.1| lysyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 499

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 73/179 (40%), Gaps = 46/179 (25%)

Query: 406 PLKFCSFAADARN----------HIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKID 453
           PL+     ADAR            + QEL   ++     +  ++MD+P            
Sbjct: 343 PLEQVRKLADARQIAWDPKWGQGRLVQELFEELVEHTLIQPTFVMDYPL----------- 391

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG--------GIRNHMSEVML 505
              +P T         +   LL+ K   +DL+  G E+ +           R  ++E  L
Sbjct: 392 -ETSPLTRQH------RSEPLLTEK---WDLIGFGTELGTAYSELIDPIEQRRRLTEQSL 441

Query: 506 QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A      + ++ E+      RA + GMPP GG+  GIDR++M   G K +RE  LFP+
Sbjct: 442 LAAGGDPEAMQLDED----FLRALEYGMPPTGGVGVGIDRMIMAFTG-KGIRETILFPL 495



 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 12/238 (5%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           ++ G  V ++G V  +R  G + F  IRD  G  QV+     +   + +   + W   +D
Sbjct: 58  TETGDKVGVAGRVMLLRNTGKLCFATIRDGTGQIQVML----SQARVGEEALASWKRDVD 113

Query: 75  -GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +    E + +    G++ + A +  I S     PLP           R + R++DL
Sbjct: 114 LGDHIGVEGEVVTSR--RGELSVMADRYAITSKCLR-PLPEKHAGLTDPEARVRLRYVDL 170

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              D   +    R+  + ++R     E ++E  TP+L        AR F+          
Sbjct: 171 IVNDEARRMAYLRSDTVRAVRDFWHEEGYLEVETPMLQPIHGGAAARPFVTHINAYDMDL 230

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           Y L  A + Y + L+  G D+ F+I   FR+E   S   P EF  L+   ++++ +D+
Sbjct: 231 Y-LRIAIELYLKRLVVGGIDKVFEINRNFRNEGADSTHNP-EFTMLEAYGTYLDYNDM 286


>gi|298242602|ref|ZP_06966409.1| lysyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297555656|gb|EFH89520.1| lysyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 504

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 13/257 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G F  + G V  +R  G   F  I D  G  QV    +    E   S R   +L +   +
Sbjct: 56  GDFA-IVGRVRLLREMGKAAFAKIEDGTGALQVYFRINDLGEE---SYRVLKLLDLGDFI 111

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +R    +     TG+  L  +   ++    + PLP        + +R + R+LDL  + 
Sbjct: 112 EARGFLFVTR---TGERTLHVKGWRVIGKGLQ-PLPEKYHGLEDKELRQRKRYLDLIANG 167

Query: 138 LHKNIV--KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
                V   R+R+I++MR  +  + ++E  TPIL        AR F+          Y L
Sbjct: 168 EEVKTVFETRSRVISAMRRFLEGQGYLEFETPILQPLYGGATARPFITHHNTLDRDLY-L 226

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + Y + L+  GF+R ++I   FR+E       P EF  ++   ++ + +D++  +E
Sbjct: 227 RIAIELYLKRLIVGGFERVYEIGRNFRNEGIDRSHNP-EFTMMECYQAYADYNDMMKLVE 285

Query: 255 NVLRGVFEEFSNGNTVS 271
            ++  + +E      V+
Sbjct: 286 EMIAYIAQEVKGTTRVT 302



 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLM 573
           A + GMPP GG+  G+DR+ M +   +++R+V LFP  +   +  M
Sbjct: 456 ALEIGMPPTGGVGIGVDRLAMFMADQESIRDVILFPTMRKTAEEQM 501


>gi|325478591|gb|EGC81703.1| asparagine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 462

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 106/263 (40%), Gaps = 40/263 (15%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT----QVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V + GW+   R    + F+++ D  G T    Q+V   D   +             +D  
Sbjct: 18  VTVYGWIRNQRFGKNVGFIELND--GTTFKNLQIVVASDIENY-----------ADLDKQ 64

Query: 77  VMSRSAETINANIITGQ----IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            +S S E     + TG      E+ A+++++L  + E   P+  +R+  E +R     L 
Sbjct: 65  FLSTSLEVTGTLVKTGNSKNPYEIQAKEVKVLGESSE-KFPIQKQRQTLEYMR-TIPHLR 122

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL--------VPS 184
            R +T       R+ +  ++        F+  + PI+TAS  EGA +           P 
Sbjct: 123 ARTNTYRAVFRVRSVLAYALHNFFQERGFVYINPPIVTASDAEGAGEMFNITTIDANDPP 182

Query: 185 RVNQGS------FYALPQAPQQYKQLL---MASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           R   GS      F++         QL     A  F   +   P FR E+  + R   EF+
Sbjct: 183 RKEDGSVDYSKDFFSKKSYLTVSGQLEAEDYALAFGDVYTFGPTFRAEESNTPRHAAEFW 242

Query: 236 QLDMEMSFVEQDDILNTMENVLR 258
            L+ EM+F + +  ++  E++++
Sbjct: 243 MLEPEMAFTDYNLAMDVAEDMIK 265



 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 7/95 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           + +D  ++ AF  D++  G  E+  G  R    E + Q+    G+  E  +N      R 
Sbjct: 364 RNDDGKTVAAF--DMLVPGVGELIGGSQREERYEELYQSMEENGLKPEEYQNYLD--LRR 419

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           F  G   H G   G +R VM + G KN+R+V  +P
Sbjct: 420 F--GTVVHSGFGLGFERAVMYVTGMKNIRDVLAYP 452


>gi|297242836|ref|ZP_06926774.1| lysyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296889047|gb|EFH27781.1| lysyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 565

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 110/252 (43%), Gaps = 17/252 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G V  +R  GG+ F+ +    G T Q + +      E  KS +    L     V  
Sbjct: 129 VGIAGRVLFLRNAGGLCFVKLSAGDGTTIQAMVSKKEIGEESIKSFKQMVDLGDHLYVRG 188

Query: 80  R--SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           R  S++T   ++   +  ++A+ ++        PLP    +E  +  R +  ++ +  D 
Sbjct: 189 RVISSKTGELSVFATEWAIAAKALQ--------PLPAL-HKELSDDTRTRKPYIGMIADE 239

Query: 138 LHKNIVKR-TRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
             +++V+R +R + S+R    + +F+E  TP+L T      AR F           Y L 
Sbjct: 240 KIRDMVRRRSRAVASLRRTFDSHDFLEVETPMLQTVHGGAAARPFTTHMNAFDIDLY-LR 298

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN-TME 254
            AP+ + +  +  G +R F+I   FR+E   +   P EF  L+   ++   D I   T E
Sbjct: 299 IAPELFLKRCLVGGIERVFEINRDFRNEGVDATHAP-EFTMLEAYQAYGTYDTIAALTKE 357

Query: 255 NVLRGVFEEFSN 266
            + +   + F +
Sbjct: 358 LIQKAALDAFGS 369



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL------YRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +      +        A   GMP
Sbjct: 474 KWDLYVRGFELATG--YSELNDPVVQRERFVAQAKDALAGDVEAMDIDEDFIEALGVGMP 531

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 532 PAGGMGMGIDRLLIALTGA-TIRETITFPL 560


>gi|224437803|ref|ZP_03658750.1| lysyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144250|ref|ZP_07806443.1| lysyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129281|gb|EFR46898.1| lysyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 526

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 112/258 (43%), Gaps = 13/258 (5%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G V  +R  G   F+ I+D  G+ Q   + +    + A   +   +L +  ++       
Sbjct: 70  GRVRFIRLMGKACFVKIQDESGVLQAYISKNDVGEDFAYIKK---ILEVGDIINVSGYAF 126

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
           +     TG++ +     +ILS +  +PLP          +R++ R++DL  +   K   K
Sbjct: 127 VTK---TGELSIHTLSFKILSKSI-VPLPEKFHGLSDIELRYRQRYVDLIVNENVKETFK 182

Query: 145 -RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQY 201
            R++II+ +R     + F+E  TP+L    P GA  R F+          Y L  AP+ Y
Sbjct: 183 LRSKIISCVRQFFEKKGFLEVETPMLHPI-PGGANARPFITHHNALDVERY-LRIAPELY 240

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+  GF+  F++   FR+E       P EF  ++   ++   +D++   + +   + 
Sbjct: 241 LKRLIVGGFEAIFELNRNFRNEGMDHSHNP-EFSMIEFYWAYKTYEDLITLTQELFTYLL 299

Query: 262 EEFSNGNTVSNNFLRICY 279
           EE      + +N   I +
Sbjct: 300 EELKLPKILKHNDTEIDF 317



 Score = 45.4 bits (106), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL  AK++++V LFP
Sbjct: 459 ALAHGMPPTAGEGIGIDRLVMLLSDAKSIKDVILFP 494


>gi|296242010|ref|YP_003649497.1| tRNA synthetase class [Thermosphaera aggregans DSM 11486]
 gi|296094594|gb|ADG90545.1| tRNA synthetase class II (D K and N) [Thermosphaera aggregans DSM
           11486]
          Length = 450

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 8/143 (5%)

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
           +R  +I E F E   PIL   S  G R          GS Y L  +   YKQ+  AS F+
Sbjct: 155 IRNALIFEGFTELQPPILGWKSDPGLRGASKVKVSLYGSEYELHSSLIMYKQI-YASIFE 213

Query: 212 RYFQIAPCFRDEDPRSDRLPG----EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
           + F  A   R E P  +   G    EF Q+D+E +F    + ++  E++L+ V +EF N 
Sbjct: 214 KIFYFARNIRVE-PAENFYTGRHLVEFTQVDVEEAFTSMQESISLAESILKKVVKEFLNN 272

Query: 268 NTVSNNFLRICYDDAIRRYGTDK 290
           +    +  RI + D  R + T+K
Sbjct: 273 HADLLDSSRIEWLD--RTFLTEK 293


>gi|325955632|ref|YP_004239292.1| asparaginyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323438250|gb|ADX68714.1| Asparaginyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 482

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/281 (20%), Positives = 107/281 (38%), Gaps = 27/281 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M  Y   +  + G       V + GWV   R +   I L+        QVV + D    E
Sbjct: 1   MQSYSIKTLLEKGKEVALQEVSIHGWVRSFRSNR-FIALNDGSCLKTIQVVVDFDKFDEE 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGER 118
           + + + +   L + G       E + +     +IE+ A+ I++L VA  EE+   +   +
Sbjct: 60  LIQQITTAASLQVVG-------EVVESQGKGQEIEIVAKDIKVLGVAASEEVQGTILQPK 112

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
            +      +   L  R +     +  R  ++ ++       +F+  +TPI+T S  EGA 
Sbjct: 113 AHSLEKLREQAHLRFRTNLFGAVMRVRNALMFAIHQYFNELDFVYINTPIITGSDAEGAG 172

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLM-----------------ASGFDRYFQIAPCFR 221
           +    +  +  +          Y Q                    A G  + +   P FR
Sbjct: 173 EMFHVTNFDLDNLPRTEDGKVDYSQDFFGKATNLTVSGQLEGEAAAMGLGKIYTFGPTFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            E+  + R   EF+ ++ EM+F   D  ++  E+ L+ V +
Sbjct: 233 AENSNTSRHLAEFWMIEPEMAFYNLDQNMDLAEDFLKYVIQ 273



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 6/79 (7%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR-AFQCGMPPHGGIAAGIDRIVM 548
           EI  G  R    +V+ +     GI +E +       YR   + G  PH G   G++R+V+
Sbjct: 405 EIIGGSQREERLDVLDERIKQFGIDQEEI-----WWYRDTRRFGTVPHSGFGLGLERLVL 459

Query: 549 LLLGAKNVREVSLFPMSQN 567
            + G  N+R+V  FP + N
Sbjct: 460 FVTGMGNIRDVIPFPRTPN 478


>gi|157736905|ref|YP_001489588.1| lysyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166980066|sp|A8ESJ5|SYK_ARCB4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157698759|gb|ABV66919.1| lysyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 504

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 11/243 (4%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G   FL I D  G+ Q+    D+        V  + +   D + +S   
Sbjct: 60  VAGRIKFFRLMGKASFLKIEDESGMLQIYVARDNLPENFYNEVFKKNIEVGDIIEIS--- 116

Query: 83  ETINANIITGQIELS--AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LH 139
                  +TG  ELS  A  ++IL+ A   PLP        + +R++ R+LDL  ++ + 
Sbjct: 117 ---GYPFVTGHGELSLHADSLKILTKAIS-PLPEKFHGIQDKELRYRQRYLDLIMNSEVR 172

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           K    R+++I+  R     + F+E  TP++   +        V      G    L  AP+
Sbjct: 173 KTFHIRSKVISLTRRFFENKGFLEVETPMMHPIAGGANAKPFVTHFNALGVDRFLRIAPE 232

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E   +   P EF  ++   ++    D++   +     
Sbjct: 233 LYLKRLIVGGFEAVFEINRNFRNEGMDATHNP-EFTSIEFYWAYKTYKDLIVLTKEYFEY 291

Query: 260 VFE 262
           +FE
Sbjct: 292 LFE 294



 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 9/82 (10%)

Query: 491 IASGGIRNHMSEV-----MLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAA 541
           IA   I N  SE+      LQ F     +KE  ++    +      A   GM P  G   
Sbjct: 407 IAGKEIANAFSELNDPIDQLQRFEGQIAAKEAGDDEAHEMDEDFVNALSYGMAPTAGQGI 466

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           GIDR+VM+L    ++R+V LFP
Sbjct: 467 GIDRLVMMLTNEHSIRDVLLFP 488


>gi|134095413|ref|YP_001100488.1| lysyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166229807|sp|A4G778|SYK_HERAR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|133739316|emb|CAL62365.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Herminiimonas
           arsenicoxydans]
          Length = 511

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 7/172 (4%)

Query: 91  TGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTR 147
           T   EL+ +  E+  + + L PLP        +  +++ R++DL    DT  +    RT 
Sbjct: 137 TKTDELTIKVSELRLITKSLRPLPDKFHGLADQETKYRQRYVDLIMNEDT-RRTFKARTA 195

Query: 148 IINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
            I+S+R  M   +F+E  TP+L T      A+ F           + L  AP+ Y + L+
Sbjct: 196 AISSIRRFMERNDFMEVETPMLHTIPGGAAAKPFTTHHNALDMEMF-LRIAPELYLKRLV 254

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             GFDR F+I   FR+E   S R   EF  ++   ++ +   +++  E V+R
Sbjct: 255 VGGFDRVFEINRNFRNEGV-SIRHNPEFTMMEFYAAYTDYKWLMDFTEAVIR 305



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY 526
           + +D ++    +++L   G EIA+G    + +E     F     +K+  +     +   Y
Sbjct: 408 RASDTVAGITERFELFMVGREIANGFSELNDAEDQAARFQAQVAAKDAGDEEAMYYDADY 467

Query: 527 -RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GMPP GG   GIDR++M++  + N+R+V LFP
Sbjct: 468 IRALEYGMPPTGGCGIGIDRLMMIITDSPNIRDVLLFP 505


>gi|283782888|ref|YP_003373642.1| lysine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441095|gb|ADB13561.1| lysine--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 565

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 110/252 (43%), Gaps = 17/252 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G V  +R  GG+ F+ +    G T Q + +      E  KS +    L     V  
Sbjct: 129 VGIAGRVLFLRNAGGLCFVKLSAGDGTTIQAMVSKKEIGEESIKSFKQMVDLGDHLYVRG 188

Query: 80  R--SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           R  S++T   ++   +  ++A+ ++        PLP    +E  +  R +  ++ +  D 
Sbjct: 189 RVISSKTGELSVFATEWAIAAKALQ--------PLPAL-HKELSDDTRTRKPYIGMIADE 239

Query: 138 LHKNIVKR-TRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
             +++V+R +R + S+R    + +F+E  TP+L T      AR F           Y L 
Sbjct: 240 KIRDMVRRRSRAVASLRRTFDSHDFLEVETPMLQTVHGGAAARPFTTHMNAFDIDLY-LR 298

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN-TME 254
            AP+ + +  +  G +R F+I   FR+E   +   P EF  L+   ++   D I   T E
Sbjct: 299 IAPELFLKRCLVGGIERVFEINRDFRNEGVDATHAP-EFTMLEAYQAYGTYDTIAALTKE 357

Query: 255 NVLRGVFEEFSN 266
            + +   + F +
Sbjct: 358 LIQKAALDAFGS 369



 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL------YRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +      +        A   GMP
Sbjct: 474 KWDLYVRGFELATG--YSELNDPVVQRERFVAQAKDALAGDVEAMDIDEDFIEALGVGMP 531

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 532 PAGGMGMGIDRLLIALTGA-TIRETITFPL 560


>gi|308234248|ref|ZP_07664985.1| lysyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943530|ref|ZP_08240995.1| lysine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491499|gb|EGF23273.1| lysine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 518

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GGI  GIDR++ML     ++R+V LFP
Sbjct: 463 RALEYGMPPTGGIGYGIDRMIMLFCDQPSIRDVLLFP 499



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 16/206 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID---GLVMS 79
           ++G +   R  G + F+ + D  G  Q+          I      +W L +    G ++ 
Sbjct: 68  VAGRIRAYRRQGKVCFIVLEDKTGTIQLF-------LRINNMSEQDWNLLLQLDLGDIIQ 120

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
            +   +      GQ+ +S  K+ +LS +   PLP          IR++ R++DL  +   
Sbjct: 121 ATGVIVRTR--RGQLSVSVTKLVLLSKSVR-PLPEKFHGLSDREIRYRQRYVDLIMNPEV 177

Query: 140 KNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           +++  KR+ II+ +R  M  + ++E  TP++        AR F          FY L  A
Sbjct: 178 RDVFRKRSHIISLIRRFMENQGYLEVETPMMHQILGGANARPFTTHFNALDCDFY-LRIA 236

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDE 223
            +   + L+  G DR F+I   FR+E
Sbjct: 237 TELPLKRLIVGGMDRVFEIGRQFRNE 262


>gi|159898199|ref|YP_001544446.1| lysyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|238687095|sp|A9B5T5|SYK_HERA2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|159891238|gb|ABX04318.1| lysyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 492

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 4/152 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R + R++DL  +   + I + R R+I +MR  +    F+E  TP+L        AR 
Sbjct: 149 QEARQRQRYVDLSANPEVREIFRIRARLITAMRRYLDERGFLEVETPVLQGIYGGAAARP 208

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           Y L  A + Y + L+  GFD  ++I   FR+E       P EF  +++
Sbjct: 209 FTTHHNQLHQDLY-LRIATELYLKRLIVGGFDGVYEIGKNFRNEGVDRTHNP-EFTMIEV 266

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
             ++ + + I+   E ++R   E+  N  ++ 
Sbjct: 267 YQAYGDYESIMQLTEGMIRFAAEQIFNSTSIE 298



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+ +L      +REV  FP
Sbjct: 449 ALKVGMPPTGGLGIGIDRLCLLFTNQTTIREVIFFP 484


>gi|207108159|ref|ZP_03242321.1| lysyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 82

 Score = 48.1 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/36 (58%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL GAK++++V LFP
Sbjct: 32  ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFP 67


>gi|146299679|ref|YP_001194270.1| lysyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|146154097|gb|ABQ04951.1| lysyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 567

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/253 (22%), Positives = 110/253 (43%), Gaps = 19/253 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +  VR  G   F +++D  G  Q+  N D  C    K++ ++    +  L 
Sbjct: 46  GKKVIVAGRLMSVRDQGKACFAELQDSEGRIQLYVNRDVLCEGDDKTLYNQVFKKLTDL- 104

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEE----LPLPVFGEREY------PESIRFK 127
                  I   + T Q+     ++   +   +    LPLP   E            +R++
Sbjct: 105 --GDFIGIEGELFTTQVGAKCIRVTGFTFLSKTLRPLPLPKVDEDGNVHDAFNDAELRYR 162

Query: 128 YRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPS 184
            R++DL  +  + +  +KRT++  +MR       ++E  TP+L  S P G  AR F+   
Sbjct: 163 MRYVDLTVNPQVKETFIKRTKLFTAMRGYFNDAGYLEVDTPVL-QSIPGGASARPFITHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + Y + L+  GF+  ++ +  FR+E       P EF  +++ +++ 
Sbjct: 222 NSLDIPLY-MRIANELYLKRLIVGGFEGVYEFSRNFRNEGMDRTHNP-EFTAMEIYVAYK 279

Query: 245 EQDDILNTMENVL 257
           + + ++   E +L
Sbjct: 280 DYNWMMEFAEGLL 292



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L    +++EV LFP
Sbjct: 456 RALEYGMPPTSGMGIGMDRLIMYLTNNASIQEVLLFP 492


>gi|169767506|ref|XP_001818224.1| asparaginyl-tRNA synthetase Slm5 [Aspergillus oryzae RIB40]
 gi|83766079|dbj|BAE56222.1| unnamed protein product [Aspergillus oryzae]
          Length = 542

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 46/263 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSE----WVLCID 74
           ++L+G++  VR      F +I D   I  + A   P  A  E++     E    W  C  
Sbjct: 50  IKLNGFIRSVRKQKRFAFAEISDGSTIEPIQAFLRPAQAA-ELSTGTAVEISGVWKACPP 108

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G   +   +T + N+              L  A+    P+  +   P+ +R   +   LR
Sbjct: 109 GKEQTHELQTTDVNV--------------LGKADPETYPIQKKYHSPDFLR---QIPHLR 151

Query: 135 RDTLHKNIVKRTR------IINSMRCRMIAEN--FIECSTPILTASSPEGARD-FLVPSR 185
             T   +++ R R      + N  R    A N  +++   P++T+S  EGA + F V  R
Sbjct: 152 MRTPFSSLLSRFRSECLYQLGNVFR---FAPNGGYVQVHPPLITSSDCEGAGETFTVLPR 208

Query: 186 VNQGS------FYALPQAPQQYKQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
              G+      F+  P+      QL +   A+     + I+P FR E   + R   EFY 
Sbjct: 209 EAMGAQSEGEHFFRAPKYLTVSSQLHLEAYAAELGNVWTISPMFRAEKSDTPRHLSEFYM 268

Query: 237 LDMEMSFVEQ-DDILNTMENVLR 258
           L+ EM+++   D + +++E +LR
Sbjct: 269 LEAEMNYMHDLDSLTDSVEYILR 291


>gi|15828861|ref|NP_326221.1| lysyl-tRNA synthetase (lysine--tRNA ligase) (LysRS) [Mycoplasma
           pulmonis UAB CTIP]
 gi|14089804|emb|CAC13563.1| LYSYL-TRNA SYNTHETASE (LYSINE--TRNA LIGASE) (LYSRS) [Mycoplasma
           pulmonis]
          Length = 510

 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+VMLL   +++REV LFP
Sbjct: 468 ALEYGLPPAGGCGIGIDRLVMLLTEKESIREVILFP 503



 Score = 45.1 bits (105), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 4/142 (2%)

Query: 125 RFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV 182
           R++ R+LDL  +   K I   RT++I+ +R     +NF+E  TP+L +      AR F  
Sbjct: 174 RYRKRYLDLISNPNIKEIFWTRTKVISKIRKFFDEQNFMEVETPMLHSILGGANARPFKT 233

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  SF          K+LL+  G DR ++I   FR+E   +   P EF  ++   +
Sbjct: 234 YHNSLSSSFNLRIATELPLKKLLVG-GIDRVYEIGRIFRNEGIDTTHNP-EFTSIEFYQA 291

Query: 243 FVEQDDILNTMENVLRGVFEEF 264
           +   + ++   EN+++ + +E 
Sbjct: 292 YSNLEIMMEQTENLIKFIAKEL 313


>gi|271964174|ref|YP_003338370.1| lysyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
 gi|270507349|gb|ACZ85627.1| Lysyl-tRNA synthetase (class II)-like protein [Streptosporangium
           roseum DSM 43021]
          Length = 1098

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 100/246 (40%), Gaps = 18/246 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR-SEWVLCIDG 75
            G  V ++G V  VR HGG++F  + D  G  Q++    +       +V   + V C+  
Sbjct: 663 TGERVAVAGRVMLVRDHGGLLFATVADWTGTLQLMITKAAGLERWRDTVDLGDHVGCVGE 722

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-ESIRFKYRFLDLR 134
           +V +R+             ELS    E  + A+ L  P    R  P +  R   R     
Sbjct: 723 VVTTRTG------------ELSVLAEEWATTAKCLRPPPGRRRGAPGQETRAGRRHPGPV 770

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            D   +  ++ R  +++ +R  ++   F+E  TPIL        AR F+          Y
Sbjct: 771 TDPEARETLRIRGAVLHGLRDSLVRRGFLEVETPILQPVHGGACARPFVTHMNAYDMRLY 830

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ + + L   G +R F++   FR+E       P EF  L+   ++ +   +L  
Sbjct: 831 -LRIAPELHLKRLCVGGAERVFELGRTFRNEGVSYKHNP-EFTMLEAYQAYADYRTMLEL 888

Query: 253 MENVLR 258
              +++
Sbjct: 889 ARELVQ 894



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           R  ++E  L A +    + E+ E+      R  +
Sbjct: 1005 AERWDLVAYGVELGTAYSELVDPVEQRRRLTEQSLLAAAGDPEAMELDED----FLRTLE 1060

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  G+DR++MLL G K++R+   FP+++
Sbjct: 1061 YAMPPTGGLGIGVDRLIMLLTG-KSIRQTLSFPLAR 1095


>gi|113955017|ref|YP_729353.1| lysyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123132786|sp|Q0IDW9|SYK_SYNS3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|113882368|gb|ABI47326.1| lysyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 489

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/274 (20%), Positives = 122/274 (44%), Gaps = 25/274 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCIDGLV 77
           V ++G V   R  G + F  + D  G  Q+    A    +  +++  V +  ++ + G +
Sbjct: 53  VSVAGRVMTRRVMGKLAFFTLADETGTIQLFLEKATLGDSFAQLSSLVDAGDLIGVHG-I 111

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---- 133
           + R+          G++ +   K E+L+ + + PLP           R++ R+LDL    
Sbjct: 112 LRRTDR--------GELSVKVSKWEMLTKSLQ-PLPDKWHGLADVEKRYRQRYLDLIVTP 162

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSF 191
             R+T  +    R   ++++R  +   +F+E  TP+L + +    AR F+          
Sbjct: 163 QSRETFRR----RAMAVSAIRRWLDERDFLEIETPVLQSEAGGAEARPFITHHNTLDLPL 218

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  GF+R +++   FR+E   +   P EF  +++  ++ + +D++ 
Sbjct: 219 Y-LRIATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP-EFTSVEVYQAYADYNDMMT 276

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             E ++  V E+      +S   + +    + RR
Sbjct: 277 LTEQLIASVCEQVCGTTRISYQGVEVDLTPSWRR 310



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 447 QALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPL 484


>gi|54309502|ref|YP_130522.1| asparaginyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|59798540|sp|Q6LPQ6|SYN_PHOPR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|46913938|emb|CAG20720.1| putative asparaginyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 466

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 108/275 (39%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V        + 
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNELNNYQE 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A +++++ + E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKIVESPAKGQDFELAATEVKVVGLVEDPDTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + F   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNIIGAVARVRNCLSQAIHRFYHEQGFFWMSAPLITASDCEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y +        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMANVPMTDAGEVDYDKDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + DD     E++L+ VF+
Sbjct: 241 SRHLAEFWMVEPEVAFADLDDAAKLAEDMLKYVFK 275


>gi|50084268|ref|YP_045778.1| lysyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|2501016|sp|Q43990|SYK_ACIAD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1359473|emb|CAA86924.1| lysyl-tRNA-synthase [Acinetobacter sp. ADP1]
 gi|49530244|emb|CAG67956.1| lysyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 509

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 110/245 (44%), Gaps = 23/245 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDG 75
           ++V+++G V   R      F+ I+D  G  Q+  +     +   E  KS+    ++  +G
Sbjct: 73  TYVKVAGRVMLNRGS----FMVIQDMTGRIQLYVDRKGLPADTLETIKSLDLGDIIAAEG 128

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-R 134
            +  RS +        G + +  +  E+L+ +   PLP           +++ R+LDL  
Sbjct: 129 YI-GRSGK--------GDLYVHLEGFELLTKSLR-PLPDKFHGLTDTEAKYRKRYLDLIV 178

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFY 192
            +   K    R +++  +R  +  + F+E  TP++    P GA  + F+          Y
Sbjct: 179 NEETRKTFEIRAQVVAGIRAFLTNQRFMEVETPMMHVI-PGGASAQPFVTHHNALDMELY 237

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   ++ +  D++  
Sbjct: 238 -LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEFYQAYADYKDLMQL 295

Query: 253 MENVL 257
            EN+L
Sbjct: 296 TENML 300



 Score = 42.4 bits (98), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VM+   A ++R+V LFP
Sbjct: 467 ALEYGLPPTAGQGIGIDRLVMIFANAPSIRDVLLFP 502


>gi|87123221|ref|ZP_01079072.1| Lysyl-tRNA synthetase, class-2:tRNA synthetases, class II
           [Synechococcus sp. RS9917]
 gi|86168941|gb|EAQ70197.1| Lysyl-tRNA synthetase, class-2:tRNA synthetases, class II
           [Synechococcus sp. RS9917]
          Length = 501

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 452 QALEVGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPL 489



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 29/200 (14%)

Query: 125 RFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-AR 178
           R++ R+LDL      R+T  +    R  +++++R  +   +F+E  TP+L A +    AR
Sbjct: 150 RYRQRYLDLIVSPQSRETFRR----RALMVSAIRRWLDDRDFLEIETPVLQAEAGGAEAR 205

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+          Y L  A + + + L+  GF+R +++   FR+E   +   P EF  ++
Sbjct: 206 PFITHHNTLDLPLY-LRIATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP-EFTSVE 263

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP-- 296
           +  ++ +  D++N  E ++  V E+             IC    I   GT   DL  P  
Sbjct: 264 VYQAYADYVDMMNLTEQLIASVTEQ-------------ICGTTRITYQGT-AVDLTPPWR 309

Query: 297 -IIMHNVTEHFVHSEFRVFS 315
              MH + +     +F  F+
Sbjct: 310 RATMHELVQEATGLDFTAFT 329


>gi|95930303|ref|ZP_01313040.1| asparaginyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133555|gb|EAT15217.1| asparaginyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 457

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 100/256 (39%), Gaps = 27/256 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GWV  +R    + F+++ D   +   Q+VA+     F       +E      G  +
Sbjct: 16  VEVRGWVRTLRASKEVCFIELNDGSCFASLQLVADRTVDNF-------AELAHIGTGACI 68

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
             S   +++     + EL   ++ ++  A+    P+  +R   E +R     L  R +T 
Sbjct: 69  KASGNLVDSPAKGQRWELHVSELTVIGNADP-SYPLQKKRHTFEYLR-SIAHLRPRSNTF 126

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV--------PSRVN--- 187
                 R  +  ++       +F+   TPI+TAS  EGA +           P + N   
Sbjct: 127 GAVFRLRNALSYAVHQFFQQRDFLYVHTPIITASDCEGAGELFRVTTLDPANPPKNNGRI 186

Query: 188 --QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             Q  F+          QL   L A+ F   +   P FR E+  + R   EF+ ++ E++
Sbjct: 187 DWQKDFFGARTGLTVSGQLQGELFATAFSDIYTFGPTFRAENSNTSRHASEFWMIEPEIA 246

Query: 243 FVEQDDILNTMENVLR 258
           F    D     E+ LR
Sbjct: 247 FANLADDCQLAEDFLR 262


>gi|269794500|ref|YP_003313955.1| lysyl-tRNA synthetase (class II) [Sanguibacter keddieii DSM 10542]
 gi|269096685|gb|ACZ21121.1| lysyl-tRNA synthetase (class II) [Sanguibacter keddieii DSM 10542]
          Length = 1147

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 18/228 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V + G V R+R  GG++F  +R+     Q +   D +  ++A      W   +D G  + 
Sbjct: 711 VEVVGRVVRLRDLGGVLFAVLREGTDQVQAMLTADGSA-DVAL-----WRRAVDLGDQVG 764

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--PESIRFKYRFLDLRRDT 137
            S     +      +++++ ++     A+ L  P    R    PE+ R + R +DL  D 
Sbjct: 765 VSGTVTRSRSGEPTVQVTSWRM----AAKALTPPPDKHRGLVDPET-RLRLRHMDLALDD 819

Query: 138 LHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
             + +++ R+  + SMR  ++  +F+E  TPIL        AR F           Y L 
Sbjct: 820 RAQQLLRARSAAVWSMRSTLVGRDFLEVETPILQRIHGGANARPFTTHINAYDMDLY-LR 878

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            AP+ Y + LM  G  R F++   FR+E   S   P EF  ++   +F
Sbjct: 879 IAPELYLKQLMVGGAGRVFELGRNFRNEGVDSTHNP-EFTSVEAYEAF 925



 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 13/93 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           R  +++  + A +    + EV E    G   A +
Sbjct: 1052 AERWDLVAFGAELGTAYSELVDPVEQRARLTQQSILAAAGDPEAMEVDE----GFLSALE 1107

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              MPP GG+  G+DR+VM+L+GA ++R+   FP
Sbjct: 1108 FAMPPTGGLGIGVDRVVMMLVGA-SIRDTLTFP 1139


>gi|226468248|emb|CAX69801.1| asparaginyl-tRNA synthetase [Schistosoma japonicum]
          Length = 495

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/272 (21%), Positives = 111/272 (40%), Gaps = 20/272 (7%)

Query: 25  GWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAE 83
           GWVHR+R     ++F+ +RD  G  Q +   +    + A ++  E  + + G+V    A 
Sbjct: 80  GWVHRIRRQSKTLMFIILRDGTGFLQCIFANNLCLTQEAITLSPESTVKVYGVVKQLPA- 138

Query: 84  TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV 143
                   G IEL A    ++  A    +      E     +   R L +R +   K + 
Sbjct: 139 ---GKSAPGGIELVADYWMVIGNAPAGGVDSVLTVESDIDTQLDNRHLVIRGENTAKVLR 195

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
             +  + + R   I   ++E   P    +  EG       +   + +F  + Q+ Q Y +
Sbjct: 196 LISIALAAFRGHYIDRGYVEVLPPTFVQTQVEGGSTLFSLNYFGETAF--MSQSSQLYLE 253

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
             + +  D  F I   +R E  R+ R   E+  ++ E  F++ + +LN +E+++  V + 
Sbjct: 254 TCIPAIGD-CFCITRSYRAEKSRTRRHLSEYNHVEAECPFIDFNGLLNRIEDLVVDVCDR 312

Query: 264 F--SNGNTV----------SNNFLRICYDDAI 283
               +G+ +             F R+ Y+DAI
Sbjct: 313 IVKQSGDLLLDVNPQFKPPKGPFKRLKYEDAI 344


>gi|39932450|sp|Q98QH1|SYK1_MYCPU RecName: Full=Lysyl-tRNA synthetase 1; AltName: Full=Lysine--tRNA
           ligase 1; Short=LysRS 1
          Length = 491

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+VMLL   +++REV LFP
Sbjct: 449 ALEYGLPPAGGCGIGIDRLVMLLTEKESIREVILFP 484



 Score = 45.1 bits (105), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 4/142 (2%)

Query: 125 RFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV 182
           R++ R+LDL  +   K I   RT++I+ +R     +NF+E  TP+L +      AR F  
Sbjct: 155 RYRKRYLDLISNPNIKEIFWTRTKVISKIRKFFDEQNFMEVETPMLHSILGGANARPFKT 214

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  SF          K+LL+  G DR ++I   FR+E   +   P EF  ++   +
Sbjct: 215 YHNSLSSSFNLRIATELPLKKLLVG-GIDRVYEIGRIFRNEGIDTTHNP-EFTSIEFYQA 272

Query: 243 FVEQDDILNTMENVLRGVFEEF 264
           +   + ++   EN+++ + +E 
Sbjct: 273 YSNLEIMMEQTENLIKFIAKEL 294


>gi|306820427|ref|ZP_07454063.1| asparagine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551502|gb|EFM39457.1| asparagine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 464

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/316 (20%), Positives = 120/316 (37%), Gaps = 66/316 (20%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSA--CFEIAKSVRSEWVLC 72
           +G  V + GWV  +R      F+++ D   +   Q+V   ++     E+ K      +  
Sbjct: 17  LGKEVTVQGWVKTIRDSKKFAFIELNDGTFFNNLQIVLEVENLENFKEVVKYPIYTAIKV 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
              LV +  A+           E+ A +I +L+ ++    P+  +R   E +R       
Sbjct: 77  RGDLVKTEGAKQ--------DFEVKANEITLLATSDS-DYPLQKKRHTFEYLR---TIAH 124

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR      + V R R I +         +NF+   TPI+TAS  EGA +    + ++  +
Sbjct: 125 LRPRANAFSAVFRVRSIAAYAVHKFFQEKNFVYAHTPIITASDAEGAGEMFQVTTLDMNN 184

Query: 191 FYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
              LP+  +                    Q +  + A  F   +   P FR E+  + R 
Sbjct: 185 ---LPKNQEGKIDFKEDFFDKETHLTVSGQLEAEIFAMAFKNVYTFGPTFRAENSNTARH 241

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVL-----------------------RGVFEEFSNG 267
             EF+ ++ E++F    + ++  E ++                       +G+FE  +  
Sbjct: 242 AAEFWMIEPEIAFATLQENMDVAEEMVKFIIRYCLENAKEEMEFFNSFVDKGLFERLN-- 299

Query: 268 NTVSNNFLRICYDDAI 283
           N + N F RI Y  A+
Sbjct: 300 NILENKFERITYTKAV 315


>gi|182420037|ref|ZP_02951271.1| asparaginyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669571|ref|ZP_04529551.1| asparagine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376074|gb|EDT73661.1| asparaginyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655015|gb|EEP52575.1| asparagine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 464

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 117/304 (38%), Gaps = 51/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V +SGW+  +R      F++I D   +   Q+V +     F EI+K   S  +     LV
Sbjct: 22  VTISGWIRTLRASNAFGFIEINDGSFFKNIQIVFDEKLDNFKEISKLPISSSLTITGTLV 81

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A++I I+        P+  +R   E +R     L  R + 
Sbjct: 82  ATPDAKQ--------PFEVQAKEI-IIEGMSNSDYPLQKKRHTFEYLR-SIAHLRPRSNA 131

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL--------VPSRVNQG 189
                  R+    ++      +NF+   TPI+T S  EGA +           P    +G
Sbjct: 132 FSATFRVRSVAAYAIHKFFQEQNFVYTHTPIITGSDCEGAGEMFRVTTLDPKTPELTKEG 191

Query: 190 S------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +      F+          QL     A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 192 NVDYTKDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSNTTRHAAEFWMIEPE 251

Query: 241 MSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLRICY 279
           ++F +  D +   E +L+ V +          +F N            + VS++F R+ Y
Sbjct: 252 IAFADLQDDMELAEAMLKYVIQYVIDECPEEMQFFNSFVDKGLLERLNHVVSSDFARVTY 311

Query: 280 DDAI 283
            +A+
Sbjct: 312 TEAV 315



 Score = 38.1 bits (87), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G  R    +V+    + +G++KE     +       + G   H G   
Sbjct: 379 DLLVPGIGEIIGGSQREERLDVLEARMAELGLAKE----DYWWYLELRKYGETKHAGFGL 434

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +R++M + G  N+R+V  FP +
Sbjct: 435 GFERLIMYITGMTNIRDVIPFPRT 458


>gi|42560639|ref|NP_975090.1| asparaginyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|59798545|sp|Q6MUF2|SYN_MYCMS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|42492135|emb|CAE76732.1| asparagine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
          Length = 452

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/249 (20%), Positives = 103/249 (41%), Gaps = 20/249 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + G V   R    + F+ + D    T +     +  +E A   R   ++ + G V+  
Sbjct: 18  VEILGRVRSNRQGKFVSFMILNDGTTFTDLQVVYKTKGYEQALQARVSSIVKVVGRVVLT 77

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +     +   +IEL  Q IE          P+  +    E +R       LR  T   
Sbjct: 78  PEKQQKFEVQADEIELIDQAIE--------DYPLQKKEHTTEYLR---EIAHLRAKTKTF 126

Query: 141 NIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGARD-FLVPSRVN---QGSFYAL 194
           N + + R   +         +NF+   +PI+T++  EGA + FLV +R +   +  F+  
Sbjct: 127 NAIFKIRSAAAYAIHRFFNEKNFVYIHSPIITSNDAEGAGEAFLVTTREDADYEKDFFGK 186

Query: 195 PQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +     QL     A  F + +   P FR E+  + +   EF+ ++ E++F +  D + 
Sbjct: 187 KASLTVSGQLHAEAFAQAFKKVYTFGPTFRAENSNTAKHAAEFWMIEPEVAFADLKDNIQ 246

Query: 252 TMENVLRGV 260
            ++++++ +
Sbjct: 247 LIQDMVKYI 255


>gi|450763|emb|CAA40634.1| lysine--tRNA ligase [Saccharomyces cerevisiae]
          Length = 576

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 11/158 (6%)

Query: 103 ILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFI 162
           +LSV++  PLP    R   E+     R +D + +      V R RII ++R      NF+
Sbjct: 193 VLSVSQ-TPLP---SRTNDETKIKSNRVVDYQLNGTQTTTV-RARIIKTLRKFTDDRNFV 247

Query: 163 ECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
           E  TP +T+S   G  A+ F+  S+        L  AP+ + +  M SG  + +++   F
Sbjct: 248 EVETP-MTSSKSNGAMAKPFMTSSK--DFDHLELRIAPELWTKRTMISGLQKVYEMGKVF 304

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           R+E   S     EF  L+   +++  DD++   E++ +
Sbjct: 305 RNEGIDSTH-NAEFSTLEFYETYMSMDDMVTRTEDLFK 341


>gi|315305583|ref|ZP_07875288.1| lysyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313626048|gb|EFR95475.1| lysyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 216

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 29/41 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            A + G+PP GG+  GIDR+VMLL  A ++R++ LFP  ++
Sbjct: 174 EALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKH 214


>gi|254172931|ref|ZP_04879605.1| asparagine synthetase A [Thermococcus sp. AM4]
 gi|214033087|gb|EEB73915.1| asparagine synthetase A [Thermococcus sp. AM4]
          Length = 300

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +KQ+ +A G D+ F ++P  R E   +D  R   EF QLDME++    DD++  +E ++ 
Sbjct: 80  HKQMAVAMGIDKLFVLSPNIRLEGKEADDGRHAYEFTQLDMEIAHASMDDVMGLIEELIV 139

Query: 259 GVFEEF 264
           G+F E 
Sbjct: 140 GLFREL 145



 Score = 41.6 bits (96), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 13/88 (14%)

Query: 482 YDL-VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPP 535
           YDL +  G+ E++SGG R    E +L    + G+S+E     +E    GL R       P
Sbjct: 211 YDLYLPEGYGEVSSGGEREWEYEKILAKIRSAGLSEEAFRPYLEVAKAGLLR-------P 263

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             G   GI+R++  ++GA+++ EV  FP
Sbjct: 264 SAGAGIGIERLIRYIVGAEHIAEVQPFP 291


>gi|325663723|ref|ZP_08152127.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325470216|gb|EGC73449.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 463

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 125/342 (36%), Gaps = 59/342 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V + GWV  +R      F+ + D   +   QVV +     F EI+K      ++    LV
Sbjct: 21  VTVGGWVRSIRDSKTFGFIVVNDGSFFETLQVVYHDSMDNFAEISKLNVGAAIIVKGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A+++ I+  A     P+  +R   E +R     L  R +T
Sbjct: 81  ATPQAKQ--------PFEIQAEEV-IIEGASAPDYPLQKKRHSFEYLR-TISHLRPRTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+ I  ++        F+   TP++T S  EGA +     RV       LP+ 
Sbjct: 131 FQAVFRVRSLIAYAIHQFFQERGFVYVHTPLITGSDCEGAGEMF---RVTTLDMENLPKN 187

Query: 198 PQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                                 Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 ADGSVDYTKDFFNKETSLTVSGQLNAETYAQAFRNVYTFGPTFRAENSNTTRHAAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGV--------------FEEFSNG-------NTVSNNFLR 276
           + E++F + DD +   E +L+ +              F  F +        N VS+ F R
Sbjct: 248 EPEIAFADLDDDMILAEAMLKHIINYVLENAPEEMNFFNSFVDKGLLDRLHNVVSSEFAR 307

Query: 277 ICYDDAIR--RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           + Y +AI       DK D +    +   TEH  +    VF +
Sbjct: 308 VTYTEAIEILEKNNDKFDFKVSWGVDLQTEHERYLTEEVFKR 349



 Score = 38.5 bits (88), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G   H G   G +R VM L G  N+R+V  FP + N C+L
Sbjct: 422 KYGSTRHAGFGLGFERCVMYLTGMSNIRDVIPFPRTVNNCEL 463


>gi|313631232|gb|EFR98695.1| lysyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 42

 Score = 47.8 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL  A ++R++ LFP
Sbjct: 1   ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFP 36


>gi|269128167|ref|YP_003301537.1| lysyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268313125|gb|ACY99499.1| lysyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 1113

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 22/257 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--------PDSACFEIAKSVRSE 68
            G  VR++G V   R HG ++F+ +RD  G  QV+ +        PD A   +  S+R+ 
Sbjct: 666 TGEQVRIAGRVMLAREHGRLVFVTLRDETGDIQVMLSADRLEPDGPDGA--PVPGSLRA- 722

Query: 69  WVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           W   ID G  +  + E + +     + ELS         A+ L PLP           R 
Sbjct: 723 WKRLIDLGDQVGIAGEVVTSK----RGELSVLATSWTLTAKCLRPLPNKRSGLADPEARV 778

Query: 127 KYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+++ +  D   + +  R   + ++R R+    ++E  TP+L        AR F    
Sbjct: 779 RQRYVEFIVNDEARRMLRMRGDAVAAIRDRLRELGYLEVETPMLQPIHGGAAARPFTTRI 838

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G  + F+I   FR+E       P EF  L+    + 
Sbjct: 839 NAYNMQLY-LRIAPELYLKRLLVGGVGKVFEINRNFRNEGVSPKHNP-EFTMLEAYEPYG 896

Query: 245 EQDDILN-TMENVLRGV 260
           + D +   T + VLR  
Sbjct: 897 DYDTMAALTRDLVLRAA 913



 Score = 44.3 bits (103), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 13/96 (13%)

Query: 479  AFQYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DL+  G E+ +           R  ++E  L A      + E+ E+      RA +
Sbjct: 1021 AEKWDLIVFGLELGTAYSELIDPILQRQRLTEQSLLAAGGDPEAMELDED----FLRALE 1076

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              MPP GG+  GIDR+++ L G K++RE   FP+++
Sbjct: 1077 YAMPPAGGMGMGIDRLLITLTG-KSIRETIPFPLAR 1111


>gi|68536277|ref|YP_250982.1| lysyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|68263876|emb|CAI37364.1| lysyl-tRNA synthetase [Corynebacterium jeikeium K411]
          Length = 1082

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 13/93 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G E+ +           R+ +    L+A      + EV E       RA +
Sbjct: 989  AERWDLVAWGVELGTAYSELTDPLEQRDRLEAQSLKAAGGDPEAMEVDE----AFLRALE 1044

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             GMPP GG+  G+DR++MLL G +++REV  FP
Sbjct: 1045 DGMPPTGGLGLGVDRLIMLLTG-RSIREVLSFP 1076



 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 37/209 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +R+SG +   R  G + F+D+RD  G  QV+   ++   E+A  +R+  +  +  +V +R
Sbjct: 666 LRVSGRIVAKREFGAVSFIDLRDASGKCQVLV--EAPKEELASRLRALDLGDLIAVVGTR 723

Query: 81  S-AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
             + T   +++   IEL A+ +  L+                            RR    
Sbjct: 724 GHSRTGEPSLLAEAIELEAKDLHPLT----------------------------RRGAGI 755

Query: 140 KNIVKRTR---IINSMRCRMIAE-NFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYAL 194
             +  R R   ++N+   R + +  F+E  TPIL        AR F   S       Y L
Sbjct: 756 GEVNARLRARSVVNAAIRRTLGDLGFMEVETPILQRVHGGANARPFKTRSNAANQDLY-L 814

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AP+ Y + L+  G ++ +++   FR+E
Sbjct: 815 RIAPELYLKRLLTQGAEKVYELGRVFRNE 843


>gi|255656228|ref|ZP_05401637.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-23m63]
          Length = 287

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 109/269 (40%), Gaps = 40/269 (14%)

Query: 17  VGSFVRLSGWVH--RVRPHGGIIFLDIRDHYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
           +G  V+++GW+   RV  + G I L+    +   Q+V +     F E+ K   S  +L  
Sbjct: 19  IGKTVKVAGWIRTSRVSKNFGFIELNDGSFFKNMQIVFDEKVENFKEVGKLAISSSILVE 78

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             LV +  A+          +E+ A+ I ++    +   P+  +R   E +R     L  
Sbjct: 79  GELVSTEGAKQ--------PVEIHAKSI-VVEGESDSSYPLQKKRHTLEYLR-TIAHLRP 128

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R +T   + V R R I +       +  NF+   +PI+T S  EGA +     R+     
Sbjct: 129 RSNTF--SAVFRVRSIAAYAIHKFFQERNFVYAHSPIITGSDCEGAGEMF---RITTMDL 183

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             +P+                       Q    +MA  F   +   P FR E+  + R  
Sbjct: 184 NDIPKTEDGKIDYTQDFFGKEANLTVSGQLNAEIMALSFRNVYTFGPTFRAENSYTGRHA 243

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            EF+ ++ E+ F + +D +   E++++ V
Sbjct: 244 SEFWMIEPEIVFADLEDNMELAEDMIKYV 272


>gi|90414515|ref|ZP_01222490.1| asparaginyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90324423|gb|EAS40985.1| asparaginyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 466

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 107/275 (38%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V        + 
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNELNNYQE 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++ + E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKIVESPAKGQDFELAATDVKVVGLVEDPDTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + F   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNMIGAVARVRNCLSQAIHRFYHEQGFFWMSAPLITASDCEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y +        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMANVPMTDAGEVDYDKDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + DD     E++L+ VF+
Sbjct: 241 SRHLAEFWMVEPEVAFADLDDAAKLAEDMLKYVFK 275



 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 7/83 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    E++ +  + +GI    +E      YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLELLDKRIAEMGIDASHIE-----WYRDLRRYGTVPHSGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            G +R+V  + G +N+R+V  FP
Sbjct: 436 LGFERLVTYVTGMQNIRDVIPFP 458


>gi|33241228|ref|NP_876170.1| lysyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|39932090|sp|Q7V9Q0|SYK_PROMA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33238758|gb|AAQ00823.1| Lysyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 502

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 458 ALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPL 494



 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 73/149 (48%), Gaps = 4/149 (2%)

Query: 125 RFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV 182
           R++ R+LDL  +    K   +R   ++++R  +   +F+E  TP+L +A+    AR F+ 
Sbjct: 159 RYRQRYLDLVVNPDSRKTFRRRALTVSAIRRWLDERSFLEIETPVLQSAAGGADARPFIT 218

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    + L  A + + + L+  GF+R +++   FR+E   +   P EF  +++  +
Sbjct: 219 HHNTFDIPLF-LRIATELHLKRLVVGGFERVYELGRIFRNEGISTRHNP-EFTSVEIYQA 276

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           F + + +++  E ++  V  E      +S
Sbjct: 277 FADYNQMMDLTEELISSVCIEICGSTKIS 305


>gi|210075817|ref|XP_503198.2| YALI0D23639p [Yarrowia lipolytica]
 gi|199425847|emb|CAG81398.2| YALI0D23639p [Yarrowia lipolytica]
          Length = 542

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 15/134 (11%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPS----RVNQGSF----- 191
           I  R  +I  +R       F+E  TPIL+  +    AR F   S    R  + S      
Sbjct: 203 IYARATVIAYVRRFFSDRGFLEVETPILSDVAGGASARPFTTESNHLTRTKKKSKSDCKE 262

Query: 192 ----YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
                AL  AP+ + + L+ SGFD+ F++ P FR+E   S   P EF   +    + E  
Sbjct: 263 ITTQIALRVAPELWLKRLVISGFDKVFEVGPSFRNESIDSTHNP-EFTTCEFYWGYAELK 321

Query: 248 DILNTMENVLRGVF 261
           D+ +T+E    G+ 
Sbjct: 322 DLTDTLEEFFIGLL 335



 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 5/87 (5%)

Query: 481 QYDLVCNGFEIASGGIRN-----HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           +++L   G E A+G          M + + Q  S    + +    +  G     + G+PP
Sbjct: 449 RFELFIGGMEYANGYEEENSPFAQMDKFVSQQQSRDEHADDEAHVQDSGYVTDMEWGLPP 508

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLF 562
             G   GIDR+VM + GAK++++V  F
Sbjct: 509 TAGCGIGIDRLVMFITGAKSIQQVIPF 535


>gi|149190811|ref|ZP_01869076.1| asparaginyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148835373|gb|EDL52345.1| asparaginyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 466

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 106/275 (38%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V         +
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYEN 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  +   + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGTIVESPAKGQDFELAATDVKVVGWVEDADTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWMSAPLITASDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     Q    + +        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMANLPLTEQGDVDFNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + DD     E++L+ VF+
Sbjct: 241 SRHLAEFWMVEPEVAFADLDDAAKLAEDMLKYVFK 275


>gi|309811638|ref|ZP_07705417.1| lysine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308434439|gb|EFP58292.1| lysine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 1108

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 13/94 (13%)

Query: 481  QYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++DLV  G EI +           RN ++E   +A +    + EV EN       A +  
Sbjct: 1015 RWDLVAFGAEIGTAYSELVDPVDQRNRLTEQSFKAAAGDPEAMEVDEN----FLAALEYA 1070

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            MPP GG+  G+DR++M+L G  N+R    FP ++
Sbjct: 1071 MPPTGGLGIGVDRLIMMLTG-NNIRATLAFPFTR 1103



 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 106/254 (41%), Gaps = 24/254 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR-----SEWVLCIDG 75
           V LSG V  +R  GG++F  I +H    QVV    +   ++ +  R      + V     
Sbjct: 666 VSLSGRVRALRDLGGVVFAFIEEHDVRLQVVLEAGAVDPQLMRLWRRTVDVGDHVSVTGT 725

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           L  SR  E    +++     ++++ +         P+P           R + R+LDL  
Sbjct: 726 LGHSRRGEP---SLLASSWCMASKSLR--------PIPSDHTGFTNPEARVRQRYLDLIV 774

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           +    N+++ R+R ++++R       ++E  TP+L A      AR F           Y 
Sbjct: 775 NKDSANLLRARSRGVSALRRAFEERGYMEVETPMLQAVHGGASARPFRTHINAYNADLY- 833

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ + + L   G DR F++   FR+E   +   P EF  ++   ++    D  NTM
Sbjct: 834 LRIAPELFLKELAVGGMDRIFELNRNFRNEGADATHNP-EFTSVE---AYAAHGD-YNTM 888

Query: 254 ENVLRGVFEEFSNG 267
             + R +  E +  
Sbjct: 889 RVLTRELVLEVATA 902


>gi|238484395|ref|XP_002373436.1| asparaginyl-tRNA synthetase Slm5, putative [Aspergillus flavus
           NRRL3357]
 gi|220701486|gb|EED57824.1| asparaginyl-tRNA synthetase Slm5, putative [Aspergillus flavus
           NRRL3357]
          Length = 542

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 46/263 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSE----WVLCID 74
           ++L+G++  VR      F +I D   I  + A   P  A  E++     E    W  C  
Sbjct: 50  IKLNGFIRSVRKQKRFAFAEISDGSTIEPIQAFLRPAQAA-ELSTGTAVEISGVWKACPP 108

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G   +   +T + N+              L  A+    P+  +   P+ +R   +   LR
Sbjct: 109 GKEQTHELQTTDVNV--------------LGKADPETYPIQKKYHSPDFLR---QIPHLR 151

Query: 135 RDTLHKNIVKRTR------IINSMRCRMIAEN--FIECSTPILTASSPEGARD-FLVPSR 185
             T   +++ R R      + N  R    A N  +++   P++T+S  EGA + F V  R
Sbjct: 152 MRTPFSSLLSRFRSECLYQLGNVFR---FAPNGGYVQVHPPLITSSDCEGAGETFTVLPR 208

Query: 186 VNQGS------FYALPQAPQQYKQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
              G+      F+  P+      QL +   A+     + I+P FR E   + R   EFY 
Sbjct: 209 EAMGAQSEGEHFFRAPKYLTVSSQLHLEAYAAELGNVWTISPMFRAEKSDTPRHLSEFYM 268

Query: 237 LDMEMSFVEQ-DDILNTMENVLR 258
           L+ EM+++   D + +++E +LR
Sbjct: 269 LEAEMNYMHDLDSLTDSVEYILR 291


>gi|167948503|ref|ZP_02535577.1| Lysyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 274

 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EIA+G    + +E   + F      K+  ++    F   Y RA + GMPP 
Sbjct: 182 RFEFFVGGREIANGFSELNDAEDQAERFRKQVEEKDAGDDEAMHFDEDYVRALEHGMPPT 241

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 242 AGEGIGIDRLVMLLTDSPSIRDVLLFP 268



 Score = 37.0 bits (84), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R ++I   FR+E   +   P EF  L+   ++ +   +++  E++
Sbjct: 8   APELYLKRLVVGGFERVYEINRNFRNEGLSTRHNP-EFTMLEFYEAYTDYHGLMDLTEDM 66

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           LR + EE     +V+       +D   RR
Sbjct: 67  LRHLCEEVLGSTSVTYQGESYDFDSPFRR 95


>gi|326474809|gb|EGD98818.1| aspartyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326477798|gb|EGE01808.1| aspartyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 563

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 32/196 (16%)

Query: 94  IELSAQKIEILSVA-EELPLPVF-GEREYPESI-----------------RFKYRFLDLR 134
           +EL   KI ++S A   LP+ V   ER  PES                  R   R LDL+
Sbjct: 182 MELHITKIYMISEAIPMLPMQVKDAERPPPESTEEGLVDTDGTPIVTLKTRLDNRILDLQ 241

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECS-----TPILTASSPEGARDFLVPSRVNQG 189
            +T    +      I+S   ++ +E  ++       T  +T ++ EG       S   + 
Sbjct: 242 TETSQAIMA-----ISSGVAQLFSEYMLKSGSRWIFTSKITGAATEGGSGVFEISYFKRK 296

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
           ++  L Q+PQ  KQ+ +A      F+I P FR ED  + R   EF  LD E +F +   +
Sbjct: 297 AY--LSQSPQLGKQMCIAGDMMSVFEIGPVFRAEDSNTHRHLTEFIGLDFEKTFQKHYHE 354

Query: 249 ILNTMENVLRGVFEEF 264
           +L+  EN+L  +  E 
Sbjct: 355 VLDFAENLLVFILSEL 370



 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R + ++ + +A    G+  E  +  F      F+ G  PH G   
Sbjct: 476 YDFFMRGEEIMSGAQRINDAKELEEAMVARGV--EPNQEGFEDYINGFRQGCAPHAGGGL 533

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV   LG  N+R  +LFP
Sbjct: 534 GLNRIVQFFLGLPNIRLATLFP 555


>gi|255078574|ref|XP_002502867.1| predicted protein [Micromonas sp. RCC299]
 gi|226518133|gb|ACO64125.1| predicted protein [Micromonas sp. RCC299]
          Length = 631

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 13/182 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE--IAKSVR 66
           D G S VG  V+L GWV  VR    + F+++ D   ++  Q V N D    E   A  + 
Sbjct: 96  DQGKSRVGDTVQLRGWVRTVRAQKDLSFIEVNDGSSLSGIQAVVNGDVPGREHLDAGDIT 155

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +   + I G+V+               +E++ + I+++  A+    P+  +R   E +R 
Sbjct: 156 TGAAVVIKGIVVESPGGK-------QAVEVAVESIKLIGGADASTFPLQKKRHTLEYLR- 207

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-RDFLVPSR 185
               L  R +T+      R ++  +         F   +TPI+TAS  EGA   F V + 
Sbjct: 208 SIAHLRPRTNTIGAVTRVRNQLAYATHTFFQQHGFQYVNTPIVTASDCEGAGEQFQVTTL 267

Query: 186 VN 187
           +N
Sbjct: 268 IN 269


>gi|293608892|ref|ZP_06691195.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829465|gb|EFF87827.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 509

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RD 179
            ++++ R+LDL   +   K    R +++  +R  +  E F+E  TP++    P GA  R 
Sbjct: 166 EVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLNNERFMEVETPMMHVI-PGGASARP 224

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++ 
Sbjct: 225 FETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEF 282

Query: 240 EMSFVEQDDILNTMENVL 257
             ++ +  D++   EN+L
Sbjct: 283 YQAYADYKDLMALTENML 300



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 467 ALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFP 502


>gi|226482506|emb|CAX73852.1| asparaginyl-tRNA synthetase [Schistosoma japonicum]
          Length = 546

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 58/272 (21%), Positives = 111/272 (40%), Gaps = 20/272 (7%)

Query: 25  GWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAE 83
           GWVHR+R     ++F+ +RD  G  Q +   +    + A ++  E  + + G+V    A 
Sbjct: 131 GWVHRIRRQSKTLMFIILRDGTGFLQCIFANNLCLTQEAITLSPESTVKVYGVVKQLPA- 189

Query: 84  TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV 143
                   G IEL A    ++  A    +      E     +   R L +R +   K + 
Sbjct: 190 ---GKSAPGGIELVADYWMVIGNAPAGGVDSVLTVESDIDTQLDNRHLVIRGENTAKVLR 246

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
             +  + + R   I   ++E   P    +  EG       +   + +F  + Q+ Q Y +
Sbjct: 247 LISIALAAFRGHYIDRGYVEVLPPTFVQTQVEGGSTLFSLNYFGETAF--MSQSSQLYLE 304

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
             + +  D  F I   +R E  R+ R   E+  ++ E  F++ + +LN +E+++  V + 
Sbjct: 305 TCIPAIGD-CFCITRSYRAEKSRTRRHLSEYNHVEAECPFIDFNGLLNRIEDLVVDVCDR 363

Query: 264 F--SNGNTV----------SNNFLRICYDDAI 283
               +G+ +             F R+ Y+DAI
Sbjct: 364 IVKQSGDLLLDVNPQFKPPKGPFKRLKYEDAI 395


>gi|254507050|ref|ZP_05119188.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219550045|gb|EED27032.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 466

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 107/275 (38%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V          
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYDD 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKIVESPAKGQDFELAATDVKVVGWVEDADTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + F   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGFFWVSAPLITASDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     +    Y +        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMENLPRTDKGDVDYNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + +DI    E++L+ VF+
Sbjct: 241 SRHLAEFWMVEPEVAFADLNDIAKLSEDMLKFVFK 275



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF-QCGMPPHGGIA 540
           D++  G  EI  G  R    E++ +    VGI  E +       YR   + G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLEILDERMREVGIDPEHM-----NWYRDLRKYGTVPHAGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R+V  + G  NVR+V  FP +
Sbjct: 436 LGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|581319|emb|CAA52877.1| putative lysyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 488

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 17/232 (7%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ ++D+ G  Q+ AN  +     AK+    + L   G ++S        N  T  + + 
Sbjct: 72  FIVLQDNCGQMQIYANKKTLNESSAKT----FSLMDFGDILSVRGTLSKTN--TDALVMK 125

Query: 98  AQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCR 155
           AQ +  L+ + + PLP  F     PE  R + R++DL  +   +N  V RT+II  +R  
Sbjct: 126 AQDMVTLTKSLK-PLPDKFHGLVDPEERR-RQRYVDLMMNEKTRNTFVMRTQIIKGIREY 183

Query: 156 MIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
             + N+IE  TPIL        A+ F+        +FY         K+L++  G DR +
Sbjct: 184 FDSLNYIEVDTPILNPMLGGAAAKPFITFYNATNRNFYLRIATELPLKKLIVG-GLDRVY 242

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           +I   FR+E   +   P EF  ++   ++    D+   ME    GVF+   N
Sbjct: 243 EIGRMFRNEGVDTTHNP-EFTSIEFYEAY---SDLWGMMERT-EGVFKHLMN 289



 Score = 43.9 bits (102), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG   GIDR +M L    ++R+V LFP
Sbjct: 447 ALEYGMPPTGGSGMGIDRTIMTLTQNDSIRDVVLFP 482


>gi|291571166|dbj|BAI93438.1| lysyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 522

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 113/260 (43%), Gaps = 25/260 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ-------VVANPDSACFEIAKSVRSEWVLCI 73
           +R+ G +   R  G I F+ + D     Q       V  +P     +I K      +L I
Sbjct: 65  LRVCGRITFKRDSGSIGFIGLTDASATIQLKIEKKLVTGDPGLTFNQIKK------LLDI 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--VFGEREYPESIRFKYRFL 131
              +     E I      G++ +   +++++S A  +P P   +G  + PE  R ++R +
Sbjct: 119 GDFI---GVEGIGCRTNRGELSIQVSRLDVISKAT-IPFPDSYYGIND-PELCR-RHREI 172

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQG 189
           DL  ++      K R+RII S+R  +    F E  TP+L T      AR F+        
Sbjct: 173 DLVSNSTSLQRFKLRSRIIRSIRTYLWNAGFDEIETPVLQTIYGGAAARPFITHHNTLDI 232

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A + + +  +  G ++ F+I   FR+E   S   P EF  +++  ++ +   I
Sbjct: 233 DLY-LRIATELFLKRAVCGGMEKVFEIGRVFRNEGIDSTHNP-EFTSIEVYQAYADYFQI 290

Query: 250 LNTMENVLRGVFEEFSNGNT 269
           +  +E+++  V  E   G+T
Sbjct: 291 MALVEDLICAVATEVLGGST 310



 Score = 44.3 bits (103), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 28/44 (63%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +A   GMP  GG+  G+DR+VM L   +++R+  LFP  ++F D
Sbjct: 478 QALSLGMPNCGGMGIGVDRLVMFLTDTQSIRDAILFPTMRSFKD 521


>gi|86134315|ref|ZP_01052897.1| lysyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821178|gb|EAQ42325.1| lysyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 565

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 13/247 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +++D  G  QV  N D  C    K++ ++    +  +    
Sbjct: 49  VVIAGRLMSRRIQGKASFAELQDGEGRIQVYFNRDEICTGEDKTLYNDVYKKLLDIGDFI 108

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLP-------VFGEREYPESIRFKYRFLD 132
             E        G+  +  +  ++LS A + LPLP        +     PE +R++ R+ D
Sbjct: 109 GIEGTLFTTKVGEKTVMVKDFKLLSKALKPLPLPKVDAEGNTYDAFNDPE-MRYRQRYAD 167

Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   K + +KRT++ N+MR       + E  TP+L        AR F+         
Sbjct: 168 LVVNPNVKEVFIKRTKLFNAMRSFFNDAGYFEVETPVLQPIPGGAAARPFITHHNSLDIP 227

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + Y + ++  GFD  ++ +  FR+E       P EF  +++ +S+ + + ++
Sbjct: 228 LY-MRIANELYLKRIIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVSYKDYNWMM 285

Query: 251 NTMENVL 257
           +  E +L
Sbjct: 286 DFCEQLL 292



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 456 RALEYGMPPTSGMGIGMDRLIMFLTNNQSIQEVLFFP 492


>gi|328480067|gb|EGF49063.1| aspartyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 84

 Score = 47.8 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 36/65 (55%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D+P +E++E  ++   AH+P TMP      L   D  +  A  YD+V NG+E+  G IR 
Sbjct: 8   DWPLFEYDEGIQRWVPAHHPLTMPNEEDVHLLDTDPHAAHAQSYDIVLNGYELGGGSIRI 67

Query: 499 HMSEV 503
           H  ++
Sbjct: 68  HNRDI 72


>gi|255068595|ref|ZP_05320450.1| lysine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255047153|gb|EET42617.1| lysine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 306

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP GG   GIDR+VMLL  ++ +R+V LFP
Sbjct: 265 RAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFP 301



 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 14/139 (10%)

Query: 159 ENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216
           E+++E  TP++    P GA  + F+          Y L  AP+ Y + L+  G +R F+I
Sbjct: 3   EHYLEVETPMM-HPIPGGATAKPFVTHHNALDIPLY-LRIAPELYLKRLVVGGLERVFEI 60

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--- 273
              FR+E   S R   EF  ++   +F + + ++   E+++R      +    +S N   
Sbjct: 61  NRSFRNEG-MSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASHTVNGTAKISYNGKE 119

Query: 274 ------FLRICYDDAIRRY 286
                 F R+   +AI++Y
Sbjct: 120 VDLESPFERLTILEAIKKY 138


>gi|89889413|ref|ZP_01200924.1| asparaginyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89517686|gb|EAS20342.1| asparaginyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 501

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/260 (20%), Positives = 102/260 (39%), Gaps = 29/260 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + + GWV   R    I   D    + + Q V  PD+   ++   +     + + G ++  
Sbjct: 36  ITVKGWVRSFRNQRFIALNDGSTIHNL-QCVIEPDNHDEDLLDQINVAAAVAVTGTLVES 94

Query: 81  SAETINANIITGQ-IELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +         +GQ +EL A  I+IL  A  EE+   +   + +      +   L +R +T
Sbjct: 95  AG--------SGQRVELQATTIKILGTADREEVAKTILSPKRHKLETLREQAHLRVRTNT 146

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  +  ++        F +  TPI+T S  EGA +    S ++  +     + 
Sbjct: 147 FGAVMRVRAALSFAVHKYFQENGFYQAHTPIITGSDAEGAGEMFRLSTLDPKNPPLDEEG 206

Query: 198 PQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              YKQ                    A G  + +   P FR E+  + R   EF+ ++ E
Sbjct: 207 NIDYKQDFFEKESNLTVSGQLEAETYAMGLGQVYTFGPTFRAENSNTSRHLAEFWMIEPE 266

Query: 241 MSFVEQDDILNTMENVLRGV 260
           ++F + D  ++  E+ ++ V
Sbjct: 267 VAFNDLDANMDLSEDFIKSV 286


>gi|303238742|ref|ZP_07325274.1| asparaginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302593621|gb|EFL63337.1| asparaginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 464

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 71/328 (21%), Positives = 121/328 (36%), Gaps = 70/328 (21%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD---HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           + ++GWV  +R      F+++ D      +  V    + + F+    +     + + G++
Sbjct: 21  ITVAGWVKTIRDSKTFGFIEVNDGSFFKNLQIVFEEQNISNFKEITKIPVGSSIIVQGVL 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-ESIRFKYRFL----D 132
           +    ET NA       EL A KIEI    E +  P     EYP +  R  + +L     
Sbjct: 81  V----ETPNAK---QPFELKASKIEI----EGMSAP-----EYPLQKKRHTFEYLRTIAH 124

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T   + V R R + +       +   F+   TPI+T S  EGA       RV    
Sbjct: 125 LRPRTNTYSAVFRIRSLAAYAIHKFFQERGFVYVHTPIITGSDAEGAGQMF---RVTTLD 181

Query: 191 FYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
              LP+  +                    Q +       F   +   P FR E+  + R 
Sbjct: 182 MNNLPKTKEGSIDFNEDFFGKETNLTVSGQLEGETYCMAFRNIYTFGPTFRAENSNTARH 241

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NT 269
             EF+ ++ E++F +  D +   E++L+ +            EF N            N 
Sbjct: 242 AAEFWMVEPEIAFSDLSDDMELAEDMLKFIINYCMENAPEEMEFFNSFVDNTLFERLNNI 301

Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           V++ F  + Y +AI     +K     P+
Sbjct: 302 VNSKFGHVTYTEAIELLKKEKDKFEYPV 329


>gi|154148211|ref|YP_001407169.1| lysyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|166229802|sp|A7I3S8|SYK_CAMHC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|153804220|gb|ABS51227.1| lysyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 499

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 60/287 (20%), Positives = 119/287 (41%), Gaps = 29/287 (10%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA----CFEIAKSVRSEWVLCIDGLVM 78
           +SG +   R  G   F +I D  G  Q+  + DS       +  K++    ++ + G   
Sbjct: 59  ISGRIKLKRVAGRSTFANIEDESGNVQIYYSKDSIGEENYLKFKKNIEVGDIILVKGYAF 118

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELP-LPVFGEREYPESIRFKYRFLDLRRD- 136
                      +TG  E S    +++  ++ +  LP        + +R++ R+LD+  D 
Sbjct: 119 -----------LTGTGEFSIHVSDLILASKAISILPEKFHGLADKELRYRQRYLDMIMDP 167

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
           ++  +  KR+ I+ ++R       F+E  TP++   +    A+ F+          Y L 
Sbjct: 168 SVRVDFEKRSLIVRTIRRFFEDRGFLEVETPMMHQIAGGANAKPFITHHNALDIDRY-LK 226

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G +  F++  CFR+E       P EF  ++   ++    + ++  E 
Sbjct: 227 IAPELYLKRLVVGGMNSVFEMNRCFRNEGMDLTHNP-EFTSIEFYWAWHNYFEAMDLTEE 285

Query: 256 VLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293
           +   + +  + G  +         S  F RI Y DA+   G   P++
Sbjct: 286 LFNELLKTLNLGEILDYGNLKIDFSKKFQRIKYLDALVLIGEISPEI 332



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA    MPP  G   G+DR+VM+LL   ++R+V LFP
Sbjct: 451 RALSYAMPPTVGWGLGVDRLVMILLNKASIRDVILFP 487


>gi|284931588|gb|ADC31526.1| Asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 456

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 17/248 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSA--CFEIAKSVRSEWVLCI 73
           G  V L G    +R  G I F+   D   +   Q+V   ++     EI+K   S  +L +
Sbjct: 18  GEQVVLVGSFKSIRSSGAIGFIAFSDSTALEPVQIVFKKENTPNFDEISKLPISSMIL-V 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V +   +           E+ A KI +L  A+    P+  +    E +R +   L +
Sbjct: 77  KGVVRNTPGKK-------QPFEIQASKIVVLKEADP-SYPLQKKAHGSEFLR-ENAHLRV 127

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-RDFLVPSRVNQGSF- 191
           R +  +  +  R+ + N+        +F+    P++T++  EGA   F V S  +Q  F 
Sbjct: 128 RTNKFYVIMKIRSELANAFFEFFKNNDFLYVHAPLITSNDSEGAGESFEVISPNDQNYFG 187

Query: 192 -YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
             A      Q+     A GF R F   P FR E   + +   EF+ ++ E+S ++ D + 
Sbjct: 188 KKASLTVSGQFAAEAYAQGFKRVFTFGPTFRAEKSHTSKHLSEFWMIEPEVSLMDLDKLT 247

Query: 251 NTMENVLR 258
             +E  ++
Sbjct: 248 ILIEQCVK 255


>gi|88808214|ref|ZP_01123725.1| lysyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88788253|gb|EAR19409.1| lysyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 497

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 455 QALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPL 492



 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 65/303 (21%), Positives = 121/303 (39%), Gaps = 34/303 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V   R  G + F  + D  G  Q+          + K+   E    I  LV + 
Sbjct: 61  VAVAGRVMTRRVMGKLAFFTLADETGTIQLF---------LEKAALGEAFAQITSLVDAG 111

Query: 81  SAETINANII-TGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL----- 133
               +   +  T + ELS +  E   + + L PLP           R++ R+LDL     
Sbjct: 112 DLIGVRGTLRRTDRGELSVKVAEWTMLTKSLQPLPDKWHGLADVEKRYRQRYLDLIVTPQ 171

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            R+T  +    R   ++++R  +    F+E  TP+L A +    AR F+          Y
Sbjct: 172 SRETFRR----RALTVSAIRRWLDEREFLEIETPVLQAEAGGADARPFITHHNTLDLPLY 227

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + + + L+  GF+R +++   FR+E   S R   EF  +++  ++ +   +++ 
Sbjct: 228 -LRIATELHLKRLVVGGFERVYELGRIFRNEG-MSTRHNPEFTSVEVYQAYTDYLGMIDL 285

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            E+++  + ++      ++     I      RR             MH + E     +F 
Sbjct: 286 TESMIASICQQVCGSTRLAYQGTEIDLTPPWRR-----------ATMHELVEEATGLDFT 334

Query: 313 VFS 315
            FS
Sbjct: 335 TFS 337


>gi|159904285|ref|YP_001551629.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|238687128|sp|A9BD62|SYK_PROM4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|159889461|gb|ABX09675.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 503

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 459 ALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPL 495



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 74/148 (50%), Gaps = 4/148 (2%)

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLV 182
           R++ R++DL  +   +   + R  +++++R  +   +F+E  TP+L + +    AR F+ 
Sbjct: 160 RYRQRYVDLIVNPQSRKTFRSRALMVSAIRRWLDERDFLEIETPVLQSEAGGAEARPFIT 219

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  S Y L  A + + + L+  GF+R +++   FR+E   +   P EF  +++  +
Sbjct: 220 HHNTLDLSLY-LRIATELHLKRLVVGGFERVYELGRIFRNEGISTRHNP-EFTTVEIYQA 277

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTV 270
           F +  D+++  E ++  V  +     T+
Sbjct: 278 FADYTDMMDLTEEMISFVCSQICGSTTI 305


>gi|332669095|ref|YP_004452103.1| lysyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332338133|gb|AEE44716.1| lysyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 511

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 11/167 (6%)

Query: 111 PLP-VFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPI 168
           PLP V+   E  E  R + R++DL  +   +++V+ R  ++ S+R  +    F+E  TP+
Sbjct: 157 PLPNVYEGAELSEEARVRQRYVDLIVNQRSRDMVRTRAAVLRSVRDNLHRRGFLEVETPM 216

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDED 224
           L    PEGA      + +N    + +P     AP+ + +     G +R F+I   FR+E 
Sbjct: 217 LQV-RPEGAAARQFETHMNA---FDIPLFLRIAPELFLKRAAVGGVERVFEINRNFRNEG 272

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
             +   P EF  L+   ++ + D I    +++++    +     TV+
Sbjct: 273 VDATHSP-EFAMLEAYEAYGDYDTIAELTQDLVQTAARDAFGSTTVT 318



 Score = 38.1 bits (87), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A +  MPP GG+  GIDR+++ L G   +RE  LFP+
Sbjct: 471 AMEFAMPPSGGMGMGIDRLLIALTGL-GIRETILFPL 506


>gi|320162390|ref|YP_004175615.1| lysyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319996244|dbj|BAJ65015.1| lysyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 511

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA   GMPP GG   GIDR+VMLL     +REV LFP
Sbjct: 461 RAMSYGMPPCGGFGMGIDRLVMLLADRHTIREVILFP 497



 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 110/265 (41%), Gaps = 23/265 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + G +  +R  G + F  I D +G  Q+    +       +  R ++ L   G  +  
Sbjct: 56  VSVGGRLRAIRTMGKVTFAHIEDGWGRLQLFFRVNELGEAEMERFRDDFDL---GDFIQA 112

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGER------------EYPESIRFKY 128
           S         +G+I L     ++LS A   PLP   +               PE+ R++ 
Sbjct: 113 SGVMFRTR--SGEITLHVHAFKMLSKAI-TPLPAAKDEVVDGKVIRHAALTDPET-RYRQ 168

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R+ DL  +   + + + R R + ++R  +    F+E  TPIL        AR F+     
Sbjct: 169 RYADLAVNPEVREVFRIRARAVKALRDYLDNMGFLEVETPILQPIYGGAAARPFVTYHNQ 228

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            + + Y L  + + Y + L+    DR ++I   FR+E       P EF QL+  M++ + 
Sbjct: 229 LKQNLY-LRISFELYLKRLLVGMLDRVYEIGRDFRNEGVSYKHNP-EFTQLEFYMAYADY 286

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS 271
             ++   E ++  V ++     T++
Sbjct: 287 LQVMEITEQMVAYVAQQVLGTTTIT 311


>gi|321309588|ref|YP_004191917.1| lysyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801432|emb|CBY92078.1| lysyl-tRNA synthetase (class II) [Mycoplasma haemofelis str.
           Langford 1]
          Length = 480

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 16/95 (16%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF--------- 529
             +Y+L   G E ++G    +  +  L+ F      K+ VE R  G   AF         
Sbjct: 388 TLRYELYIGGKEFSNGFAELNDPDDQLERF------KKQVEERDLGNEEAFDVDYEYIEA 441

Query: 530 -QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            + G+PP GGI  GIDR+VML    K++++V  FP
Sbjct: 442 MKYGLPPTGGIGIGIDRLVMLFTEKKSIKDVIFFP 476


>gi|300786628|ref|YP_003766919.1| asparaginyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299796142|gb|ADJ46517.1| asparaginyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 336

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 6/137 (4%)

Query: 147 RIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
           R++ ++R  + A  F E   PI+   +  GAR          G  Y L  +   YKQ  +
Sbjct: 36  RMLTAVREFLSARGFTELLLPIIGPVTDPGARGAKQVDIDFYGHRYKLMTSAILYKQAAL 95

Query: 207 ASGFDRYFQIAPCFR---DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            + FD+ F IAP  R    E   +DR   EF+Q+D+E++   +D I   +E ++R V  +
Sbjct: 96  TT-FDKIFCIAPNVRLEPVETASTDRHLVEFHQIDVEVADASRDQITRLVEELVRTVIRD 154

Query: 264 FSNGNTVSNNFLRICYD 280
            +    + ++F R+  D
Sbjct: 155 VTAA--LPDDFDRLGRD 169



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 10/86 (11%)

Query: 482 YDLVC-NGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVEN--RFGGLYRAFQCGMPPHG 537
           +DL+   G+ E+ SG  R H    ++      G      EN  ++    R  + G+PP  
Sbjct: 249 FDLIAPEGYGELCSGSEREHDYATIVTRMRETG------ENPAKYAWYLRMVRDGIPPSA 302

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G++R+   L G  +VRE S FP
Sbjct: 303 GFGIGLERLTRYLAGLASVREASAFP 328


>gi|209523130|ref|ZP_03271686.1| lysyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209496281|gb|EDZ96580.1| lysyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 522

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 113/260 (43%), Gaps = 25/260 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ-------VVANPDSACFEIAKSVRSEWVLCI 73
           +R+ G +   R  G I F+ + D     Q       V  +P     +I K      +L I
Sbjct: 65  LRVCGRITFKRDSGSIGFIGLTDASATIQLKIEKKLVTGDPGLTFNQIKK------LLDI 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--VFGEREYPESIRFKYRFL 131
              +     E I      G++ +   +++++S A  +P P   +G  + PE  R ++R +
Sbjct: 119 GDFI---GVEGIGCRTNRGELSIQVSRLDVISKAT-IPFPDSYYGIND-PELCR-RHREI 172

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQG 189
           DL  ++      K R+RII S+R  +    F E  TP+L T      AR F+        
Sbjct: 173 DLVSNSTSLQRFKLRSRIIRSIRTYLWNAGFDEIETPVLQTIYGGAAARPFITHHNALDI 232

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A + + +  +  G ++ F+I   FR+E   S   P EF  +++  ++ +   I
Sbjct: 233 DLY-LRIATELFLKRAVCGGMEKVFEIGRVFRNEGIDSTHNP-EFTSIEVYQAYADYFQI 290

Query: 250 LNTMENVLRGVFEEFSNGNT 269
           +  +E+++  V  E   G+T
Sbjct: 291 MALVEDLICAVATEVLGGST 310



 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 28/44 (63%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +A   GMP  GG+  G+DR+VM L   +++R+  LFP  ++F D
Sbjct: 478 QALSLGMPNCGGMGIGVDRLVMFLTDTQSIRDAILFPTMRSFKD 521


>gi|242762857|ref|XP_002340463.1| lysyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218723659|gb|EED23076.1| lysyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 602

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/256 (20%), Positives = 115/256 (44%), Gaps = 20/256 (7%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIA-----KSVRSEWVLCID 74
           V+++G +   R  G  + F D+R      Q++     A  E+      + +R   ++ I 
Sbjct: 126 VQVAGRIENKRSAGTKLFFYDLRAEGIKLQILCQAQYATGEVPFAEQHEQLRRGDIIGIT 185

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL- 133
           G     + +T +     G++ + A ++++L+      L            RF+ R+LDL 
Sbjct: 186 GFPGRSNPKTRDE----GELSIFATEVKLLAPC----LHALPRGLQDSETRFRQRYLDLI 237

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSF 191
             ++  K    R +I+  +R    + +F E  TP++ A +    A+ F+   + +N   F
Sbjct: 238 MNESSRKVFTTRAKIVRYVRNFFDSRDFTEVETPMMNAIAGGATAKPFITHHNDLNLNLF 297

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D+++
Sbjct: 298 MRV--APELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMD 354

Query: 252 TMENVLRGVFEEFSNG 267
             E ++ G+ +  + G
Sbjct: 355 LTEELVSGLVKHVTGG 370



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 25/40 (62%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + + G+PP GG   GIDR+VM L    +++EV  FP  ++
Sbjct: 536 SLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLTFPFMKD 575


>gi|154311528|ref|XP_001555093.1| hypothetical protein BC1G_06223 [Botryotinia fuckeliana B05.10]
 gi|150850734|gb|EDN25927.1| hypothetical protein BC1G_06223 [Botryotinia fuckeliana B05.10]
          Length = 607

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 119/262 (45%), Gaps = 16/262 (6%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV-----ANPDSACFEIA-KSVRSEWVLCI 73
           +RL   ++  R  G  ++F D++      QV+     +   +  FE   + +R   V+ I
Sbjct: 126 IRLGARIYNKRASGNKLVFYDVKSEDTKIQVMCQLQESREGAPAFESQHEPLRRGDVIGI 185

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLD 132
            G     + +        G++ + A +I +L+   ++LP   +G ++     R + R+LD
Sbjct: 186 VGYPGRTAPKNKIEKGEEGELSIFATEIILLTPCVQQLPDEYYGFKD--NEKRHRQRYLD 243

Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQG 189
           L   D   K ++ R+ +   +R    + +F E  TP++ + +    A+ F    + +N  
Sbjct: 244 LIMNDASRKVLMTRSDMTAYIRNYFNSRDFKEVETPMMNSIAGGATAKPFKTHHNDLNMD 303

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            F  +  AP+ Y ++L+  G +R +++   FR+E       P EF   +  M++ +  D 
Sbjct: 304 MFMRI--APELYLKMLVVGGMNRVYEMGRQFRNEGIDLTHNP-EFTTCEFYMAYADVYDT 360

Query: 250 LNTMENVLRGVFEEFSNGNTVS 271
           ++  E ++ G+ +  + G T  
Sbjct: 361 MDMTEELVSGLVKHITGGTTTK 382



 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 23/37 (62%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VM L    +++EV  FP
Sbjct: 543 RALEFGLPPTAGWGMGIDRLVMFLTDNYSIKEVLTFP 579


>gi|291534318|emb|CBL07430.1| asparaginyl-tRNA synthetase [Roseburia intestinalis M50/1]
          Length = 463

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 106/274 (38%), Gaps = 50/274 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V   V + GWV  +R      F           +V N D   FE  + V S  +   D +
Sbjct: 17  VDQTVTIGGWVRSIRNSKNFGF-----------IVVN-DGTFFEPVQVVYSNVLENFDDV 64

Query: 77  VMSRSAETIN---ANIITGQI----------ELSAQKIEILSVAEELPLPVFGEREYPES 123
                 E +N   A I+TG++          E+ A+KIEI  V+     P+  ++   E 
Sbjct: 65  ------EKLNVGAAIIVTGKLVATPGTKQPFEIQAEKIEIEGVSTP-DYPLQKKKHSFEY 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R     L  R +T       R+ I  ++       +F+   TP++T S  EGA +    
Sbjct: 118 LR-TISHLRPRTNTFEAVFRVRSLIAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQV 176

Query: 184 SRVNQGSFYALPQAPQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPR 226
           + ++  +    P     Y +                    A  F   +   P FR E+  
Sbjct: 177 TTLDMNNLPKNPDGTVDYSKDFFNKPTNLTVSGQLNGETYAMAFKNIYTFGPTFRAENSN 236

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           + R   EF+ ++ E++F + +D +   E++L+ +
Sbjct: 237 TTRHAAEFWMIEPEIAFADLEDDMILAESMLKYI 270



 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + +L   + +G+ +E  + +F    R +  G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDYDKLLARINELGLKEE--DYQFYLDLRKY--GSARHAGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMSNIRDVIPFPRTVNNCEL 463


>gi|260947822|ref|XP_002618208.1| hypothetical protein CLUG_01667 [Clavispora lusitaniae ATCC 42720]
 gi|238848080|gb|EEQ37544.1| hypothetical protein CLUG_01667 [Clavispora lusitaniae ATCC 42720]
          Length = 499

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 11/116 (9%)

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGIS 514
             PF MP     S  G D        +DL+   F E+  G +R H  + + Q     G++
Sbjct: 391 QKPFYMPL----SKYGLDKERPTVACFDLIVPEFGELVGGSLREHRHDELHQEIIRRGMN 446

Query: 515 KEVVENRFGGLYRAF-QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            E ++      Y +  Q G  PHGG   G +R++  L   +N++++S FP +   C
Sbjct: 447 AESMQ-----WYLSLRQNGTVPHGGFGMGFERLIAYLAAIENIKDISAFPRAPQIC 497



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R  TL   +  R+R+            F + + P++T+S  EGA +        +  
Sbjct: 153 LRHRTATLASILRFRSRVEQHAMNFFAKNGFTKVAPPLITSSDCEGAGEMFSIEPFTKAD 212

Query: 190 ---SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               F+   A      Q    ++A   +R + + PCFR E   ++R   EF+ L+ E+ +
Sbjct: 213 SKEKFFGQDAFLTVSTQLHLEVLAPSLNRVWTLTPCFRAEQSNTNRHLSEFWMLEAEVCY 272

Query: 244 VEQ-DDILNTMENVLRGVFEEF 264
           VE    + + +E+ +R + ++ 
Sbjct: 273 VENISQLTDLVEDSIRSIAKDL 294


>gi|295664859|ref|XP_002792981.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226278502|gb|EEH34068.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 410

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 6/84 (7%)

Query: 482 YDLVCNGFEIASGGIR-NHMSEVMLQAFSN-VGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           YD    G EI SG  R N   E+    F+  +  + E  E+  G    AF+ G P H G 
Sbjct: 323 YDFFMRGEEIMSGAQRINDAKELEAAMFAKGLNPNDEGFEDYIG----AFRQGCPLHAGG 378

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             G++RIVM  LG  N+R  +LFP
Sbjct: 379 GLGLNRIVMFFLGLPNIRLATLFP 402


>gi|148238513|ref|YP_001223900.1| lysyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|166230596|sp|A5GI38|SYK_SYNPW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|147847052|emb|CAK22603.1| Lysyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 489

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 447 QALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPL 484



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 110/259 (42%), Gaps = 23/259 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V   R  G + F  + D  G  Q+          + K+   E    I  LV + 
Sbjct: 53  VAVAGRVMTRRVMGKLAFFTLADETGTIQLF---------LEKAALGEAFAQITSLVDAG 103

Query: 81  SAETINANII-TGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL----- 133
               +   +  T + ELS +  E   + + L PLP           R++ R+LDL     
Sbjct: 104 DLIGVRGTLRRTDRGELSVKVAEWTMLTKSLQPLPDKWHGLADVEKRYRQRYLDLIVTPQ 163

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            R+T  +    R   ++++R  +    F+E  TP+L + +    AR F+          Y
Sbjct: 164 SRETFRR----RALTVSAIRRWLDEREFLEIETPVLQSEAGGADARPFITHHNTLDLPLY 219

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + + + L+  GF+R +++   FR+E   +   P EF  +++  ++ +   ++  
Sbjct: 220 -LRIATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP-EFTSVEVYQAYADYLGMIEL 277

Query: 253 MENVLRGVFEEFSNGNTVS 271
            E+++  V E+   G  ++
Sbjct: 278 TESMIASVCEQVCGGTRLT 296


>gi|330916413|ref|XP_003297410.1| hypothetical protein PTT_07805 [Pyrenophora teres f. teres 0-1]
 gi|311329920|gb|EFQ94492.1| hypothetical protein PTT_07805 [Pyrenophora teres f. teres 0-1]
          Length = 799

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 40/250 (16%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  + ++G+V  VR    I F  I D   +   Q V  P     ++A+ + +   + + G
Sbjct: 69  GETLTINGYVRTVRKQKRIAFAAIGDGSTLQTVQAVLAP-----QLAEGLSTGVAVTVTG 123

Query: 76  LVMSRSAETINANIITGQI-ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
             +    +        GQ  EL   K+ IL   +    P+  +++Y ++  F      LR
Sbjct: 124 KWIPSPGQ--------GQSHELQVNKVRILGENDAAAYPI--QKKY-QTAEFLRTLPHLR 172

Query: 135 RDTLHKNIVKRTR-IINSMRCRMIAE-NFIECSTPILTASSPEGARDFL--------VP- 183
                 +++ R R ++ +   R  A+ +F++C  PI+T+S  EGA +          +P 
Sbjct: 173 SRLPFNSLILRLRSLVTAEVTRYFAKHDFVQCHPPIITSSDCEGAGEVFTVAPGAPAIPD 232

Query: 184 -------SRVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                  ++ +   F+  P+      QL    +A   ++ + ++P FR E   + R   E
Sbjct: 233 TQLSNHQAKQHDDQFFGSPKYLTVSSQLHLEALAQSVNKVWALSPTFRAEKSDTARHLSE 292

Query: 234 FYQLDMEMSF 243
           FY L+ E++F
Sbjct: 293 FYMLEAELAF 302


>gi|291523160|emb|CBK81453.1| asparaginyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 464

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 104/264 (39%), Gaps = 30/264 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +G  V + GWV  +R      FL + D  ++   QVV +   A F     +     + + 
Sbjct: 18  LGQTVEIGGWVRNIRDSKTFGFLVVNDGTYFEPLQVVFHDAMANFSDICHLNVGAAVIVK 77

Query: 75  G-LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           G LV +  A+           E+ A+ +EI   A     P+  +R   E +R     L  
Sbjct: 78  GQLVATPKAKQ--------PFEIQAETVEIEG-ASTPDYPLQPKRHTFEYLR-TLTHLRA 127

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS--- 190
           R +T       R+ I  ++       +F+   TP++T S  EGA +    + ++  +   
Sbjct: 128 RTNTFEAVFRVRSLIAYAIHQFFQERDFVYVHTPLITGSDCEGAGEMFQVTTMDLNNVPK 187

Query: 191 -----------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+  P       QL     A  F   +   P FR E+  + R   EF+ 
Sbjct: 188 NEEGKVDFSEDFFGKPTNLTVSGQLNGETFAMAFRNIYTFGPTFRAENSNTTRHAAEFWM 247

Query: 237 LDMEMSFVEQDDILNTMENVLRGV 260
           ++ E++F +  D +   E++++ V
Sbjct: 248 IEPEIAFADLQDDMELAESMMKYV 271



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D++  G  EI  G  R +  + +L     +G+ +E  +  F    R +  G   H G   
Sbjct: 379 DMLVPGIGEIIGGSERENDYDKLLTRMKELGLKEE--DYSFYLDLRKY--GSTRHAGFGL 434

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R VM L G  N+R+V  FP + N C+L
Sbjct: 435 GFERCVMYLTGMGNIRDVIPFPRTVNNCEL 464


>gi|254431514|ref|ZP_05045217.1| lysyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197625967|gb|EDY38526.1| lysyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 522

 Score = 47.8 bits (112), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 28/38 (73%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 456 QALEVGMPPTGGLGIGIDRLVMLLTDSTSIRDVIAFPL 493



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 12/153 (7%)

Query: 125 RFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           R++ R+LDL      R+T  +    R   +++MR  +    F+E  TP+L  S P GA  
Sbjct: 159 RYRQRYLDLIVSPHTRETFRR----RALAVSAMRRWLDERGFLEIETPVLQ-SQPGGADA 213

Query: 180 FLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
               +  N       L  A + + + L+  GF+R +++   FR+E   +   P EF  ++
Sbjct: 214 RPFETHHNALDLPLTLRIATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP-EFTSVE 272

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           +  ++ +  D++   E +L  V ++      ++
Sbjct: 273 IYQAYADYTDMMELTEQLLAHVCQQVCGTTAIT 305


>gi|325121342|gb|ADY80865.1| lysyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 520

 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RD 179
            ++++ R+LDL   +   K    R +++  +R  +  E F+E  TP++    P GA  R 
Sbjct: 177 EVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLNNERFMEVETPMMHVI-PGGASARP 235

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++ 
Sbjct: 236 FETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEF 293

Query: 240 EMSFVEQDDILNTMENVL 257
             ++ +  D++   EN+L
Sbjct: 294 YQAYADYKDLMALTENML 311



 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 478 ALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFP 513


>gi|330008638|ref|ZP_08306291.1| putative lysine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328535090|gb|EGF61607.1| putative lysine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 312

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 16/157 (10%)

Query: 152 MRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
           MR  M+A  F+E  TP++    P GA  R F+          Y L  AP+ Y + L+  G
Sbjct: 1   MRQFMVARGFMEVETPMMQVI-PGGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGG 58

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE------E 263
           F+R F+I   FR+E       P EF  +++ M++ +  D++   E++ R + +      E
Sbjct: 59  FERVFEINRNFRNEGISVRHNP-EFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKTE 117

Query: 264 FSNGNTV---SNNFLRICYDDAIRRY--GTDKPDLRN 295
              G+ V      F ++   +AI+++   T+  DL N
Sbjct: 118 VPYGDQVFDFGKPFEKLTMREAIKKHRPETNMADLDN 154



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 271 ALEYGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 306


>gi|298253472|ref|ZP_06977264.1| lysyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297532867|gb|EFH71753.1| lysyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 565

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL------YRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +      +        A   GMP
Sbjct: 474 KWDLYVRGFELATG--YSELNDPVVQRERFVAQAKDALAGDVEAMDIDEDFIEALGVGMP 531

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 532 PAGGMGMGIDRLLIALTGA-TIRETITFPL 560



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 110/252 (43%), Gaps = 17/252 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G V  +R  GG+ F+ +    G T Q + +      E  KS +    L     V  
Sbjct: 129 VGIAGRVLFLRNAGGLCFVKLSAGDGTTIQAMVSKKEIGEESIKSFKQMVDLGDHLYVRG 188

Query: 80  R--SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           R  S++T   ++   +  ++A+ ++        PLP    +E  +  R +  ++ +  D 
Sbjct: 189 RVISSKTGELSVFATEWAIAAKALQ--------PLPAL-HKELSDDTRTRKPYIGMIADE 239

Query: 138 LHKNIVKR-TRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
             +++V+R +R + S+R    + +F+E  TP+L T      AR F           Y L 
Sbjct: 240 KIRDMVRRRSRAVASLRRTFDSHDFLEVETPMLQTVHGGAAARPFTTHMNAFDIDLY-LR 298

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN-TME 254
            AP+ + +  +  G +R F+I   FR+E   +   P EF  L+   ++   D I   T E
Sbjct: 299 IAPELFLKRCLVGGIERVFEINRDFRNEGVDATHAP-EFTMLEAYQAYGTYDTIAALTKE 357

Query: 255 NVLRGVFEEFSN 266
            + +   + F +
Sbjct: 358 LIQKAAVDAFGS 369


>gi|297284499|ref|XP_002802606.1| PREDICTED: lysyl-tRNA synthetase isoform 3 [Macaca mulatta]
          Length = 423

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 122 ESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--R 178
           +  R++ R+LDL   D + +  + R++++  +R  +    F+E  TP++    P GA  +
Sbjct: 93  KETRYRQRYLDLILNDFVRQKFIIRSKMVTYIRSFLDELGFLEIETPMMNII-PGGAVAK 151

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +
Sbjct: 152 PFITYHNELDMNLY-MRIAPELYHKILVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCE 209

Query: 239 MEMSFVEQDDILNTMENVLRGV 260
             M++ +  D++   E ++ G+
Sbjct: 210 FYMAYADYHDVMEITEKMVSGM 231



 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   G+DR+ M L  + N++EV LFP
Sbjct: 362 ALEYGLPPTGGFGMGLDRVAMFLTDSNNIKEVLLFP 397


>gi|259047581|ref|ZP_05737982.1| lysine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259035772|gb|EEW37027.1| lysine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 501

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 29/42 (69%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           +A + G+ P GG+  GIDR+VMLL  ++++R V LFP  +N 
Sbjct: 459 QALEYGLSPTGGVGIGIDRLVMLLTNSQSIRNVLLFPTMKNL 500


>gi|257784175|ref|YP_003179392.1| asparaginyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472682|gb|ACV50801.1| asparaginyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 467

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 107/268 (39%), Gaps = 39/268 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDS-ACFEIAKSVRSEWVLCID 74
           G  V  +GWV  VR      F+ + D   +   QVV N ++ + +E   S      L I+
Sbjct: 18  GQKVTAAGWVRSVRDMKNFGFVTLNDGSCFKDLQVVMNRENLSNYEEVASCGVGAALIIE 77

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V+  + +          IEL AQ I ++        P+  +R+  E +R +     LR
Sbjct: 78  G-VLELTPDRPQP------IELQAQTI-VIEGPSSPDYPMQKKRQSLEYLRTQQH---LR 126

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             T     V R R + +       ++  F+  +TPI+TAS  EGA +     RV      
Sbjct: 127 PRTNMFRAVFRIRSVAAFAIHQFFQDRGFVYVNTPIITASDAEGAGEMF---RVTTLDLN 183

Query: 193 ALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
            +P+  +                    Q +    A  F   +   P FR E+  + R   
Sbjct: 184 NVPRTEKGDVDYSKDFFGQSSHLTVSGQLQAENFAMAFGDVYTFGPTFRAENSNTRRHAA 243

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGV 260
           EF+ ++ EM+F +    ++  E +LR V
Sbjct: 244 EFWMIEPEMAFCDLAQDMDVAEEMLRYV 271


>gi|331087243|ref|ZP_08336313.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330408929|gb|EGG88390.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 463

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 75/339 (22%), Positives = 124/339 (36%), Gaps = 53/339 (15%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V + GWV  +R      F+ + D   +   QVV +     F EI+K      ++    LV
Sbjct: 21  VTVGGWVRSIRDSKTFGFIVVNDGSFFETLQVVYHDSMDNFAEISKLNVGAAIIVKGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A+++ I+  A     P+  +R   E +R     L  R +T
Sbjct: 81  ATPQAKQ--------PFEIQAEEV-IIEGASAPDYPLQKKRHSFEYLR-TISHLRPRTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVNQ 188
                  R+ I  ++        F+   TP++T S  EGA +           VP   + 
Sbjct: 131 FQAVFRVRSLIAYAIHQFFQERGFVYVHTPLITGSDCEGAGEMFRVTTLDMENVPKNADG 190

Query: 189 GSFYALP--------QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              Y               Q      A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 191 SVDYTKDFFNKETSLTVSGQLNAETYAQAFRNVYTFGPTFRAENSNTTRHAAEFWMVEPE 250

Query: 241 MSFVEQDDILNTMENVLRGV--------------FEEFSNG-------NTVSNNFLRICY 279
           ++F + DD +   E +L+ +              F  F +        N VS+ F R+ Y
Sbjct: 251 IAFADLDDNMILAEAMLKHIINYVLENAPEEMNFFNSFVDKGLLDRLHNVVSSEFARVTY 310

Query: 280 DDAIR--RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
            +AI       DK D +    +   TEH  +    VF +
Sbjct: 311 TEAIEILEKNNDKFDFKVSWGVDLQTEHERYLTEEVFKR 349



 Score = 38.5 bits (88), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G   H G   G +R VM L G  N+R+V  FP + N C+L
Sbjct: 422 KYGSTRHAGFGLGFERCVMYLTGMSNIRDVIPFPRTVNNCEL 463


>gi|298713460|emb|CBJ27015.1| Lysyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 710

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  GIDR++MLL GA ++R+V  FP+
Sbjct: 655 ALERGMPPTAGLGIGIDRLIMLLAGATSIRDVIAFPL 691



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 58/279 (20%), Positives = 120/279 (43%), Gaps = 20/279 (7%)

Query: 6   THSCGDL---------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           THS  +L         G  D  + V ++G +   R  G + F +++D  G  Q+  +   
Sbjct: 225 THSSSELQKQWEGLEAGTEDEEAEVSVAGRIMARRVFGKLAFFNMQDSEGSFQLYIDKGR 284

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E  K +++ W    D +     A+        G++ +  +   +LS +  LPLP   
Sbjct: 285 LGDEF-KDLKT-WTDAGDIV----GAKGTVKRTDKGELSVYVKSWAMLSKSV-LPLPDKF 337

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
                   R++ R +D+  +   +++ + R ++ + +R  +  ++F+E  TP+L + +  
Sbjct: 338 HGLKDTEKRYRQRHVDMMVNPAVRDVFRMRAKVTSFIRRSLDDDDFLEIETPVLQSIAGG 397

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             A+ F     V       L  A + + + L+  GFDR +++   FR+E   +   P EF
Sbjct: 398 AAAKPFATHHNVLDMPL-TLRIATELHLKRLVVGGFDRVYELGRIFRNEGISTRHNP-EF 455

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
             +++  ++ +  D++   E ++ G   E      VS  
Sbjct: 456 TSVEVYQAYADYHDMMELTERLVAGAASEVLGTTAVSGG 494


>gi|77920084|ref|YP_357899.1| hypothetical protein Pcar_2490 [Pelobacter carbinolicus DSM 2380]
 gi|77546167|gb|ABA89729.1| truncated, possibly inactive, lysyl-tRNA synthetase(class II),
           putative [Pelobacter carbinolicus DSM 2380]
          Length = 304

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 13/154 (8%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
            + +R RI+ ++R   +  +F+E  TP  +  ++PE   D +      Q   + L  +P+
Sbjct: 14  RLEQRARIVQTIRSFFVGRDFLEVETPHRIPGNAPEAHIDAV------QSDDWFLHTSPE 67

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+A+G+ + FQ+  C+R  +  S  LP EF  L+   +  +   ++   E++L  
Sbjct: 68  LCMKRLLAAGYPQLFQLCRCWRAAERGSRHLP-EFTMLEWYAAGCDYHTLMEQCESLLAT 126

Query: 260 VFEEFS---NGNTV--SNNFLRICYDDAIRRYGT 288
           +    +    G T+  +  + R+  D+A  RYG+
Sbjct: 127 LLPGGNLTYRGQTIDLTPPWERLTVDEAFDRYGS 160


>gi|304415263|ref|ZP_07395960.1| asparaginyl tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304282889|gb|EFL91355.1| asparaginyl tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 446

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 64/313 (20%), Positives = 114/313 (36%), Gaps = 67/313 (21%)

Query: 23  LSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           + GWV   R    G+ F+ + D   +   QVV N   A +E       E +    G  + 
Sbjct: 2   IRGWVRTRRDSKAGLSFIAVDDGSCFASLQVVVNNSLANYE------KEILRLTPGCSVE 55

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-----ESIRFKYRFLDLR 134
            S + + +       E+ A ++ +    ++        + YP      SI +      LR
Sbjct: 56  ISGQIVASPAKGQAFEMQATEVVVKGCVDD-------PKTYPMAAKCHSIEYLREVAHLR 108

Query: 135 RDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             T   + V R R  +  ++      + +   STP++TAS  EGA +     RV+     
Sbjct: 109 PRTHLISAVARVRHTLAQAIHRFFHEKGYFWLSTPLITASDTEGAGEMF---RVSTLDLE 165

Query: 193 ALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
            LP+                       Q      A    + +   P FR E+  + R   
Sbjct: 166 NLPRTENGKIDFDKDFFGKEAFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLA 225

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT---------------------VS 271
           EF+ ++ E++F + DD+    E +L+ +F+   N                        +S
Sbjct: 226 EFWMVEPEVAFADLDDVAGLAEEMLKYLFKAVLNERADDLAFFAERIDKTVITRLQDFIS 285

Query: 272 NNFLRICYDDAIR 284
            +F ++ Y DAI+
Sbjct: 286 KDFAQVDYTDAIK 298


>gi|84996825|ref|XP_953134.1| lysyl t-RNA synthetase [Theileria annulata strain Ankara]
 gi|65304130|emb|CAI76509.1| lysyl t-RNA synthetase, putative [Theileria annulata]
          Length = 679

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 19/207 (9%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIIN 150
           G+I +  +KI+ LS    +P P           R++ R LDL  + L +  ++KR ++I+
Sbjct: 292 GEISIIPKKIKFLSKCL-IPPPSKQHGLKDVETRYRLRHLDLLTNELTRYQVLKRFQVIS 350

Query: 151 SMRCRMIAENFIECSTPILTASSPEGARDFLVP-----SRVNQGSFYALPQAPQ-QYKQL 204
            +R  +    F+E  TPIL         D   P      R+N+     L  AP+   K++
Sbjct: 351 KIRKFLTEREFVEVDTPILQHY---ACGDLAEPFETYYKRLNEK--VKLRIAPEFSIKKI 405

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
            M     + F+I  CFR+E   S R   EF  +++     + + ++  +E+++  +    
Sbjct: 406 FMGLPLTKVFEIGKCFRNEGS-SLRHSPEFTMIEIYQKMADYNTMIKLLEDLINYLLSYG 464

Query: 265 SNGNTVSNNFLRIC-----YDDAIRRY 286
            + ++V  N   I      + D I+ Y
Sbjct: 465 FDEDSVCKNVFEIKWRSSRFSDLIKEY 491


>gi|71021047|ref|XP_760754.1| hypothetical protein UM04607.1 [Ustilago maydis 521]
 gi|46100184|gb|EAK85417.1| hypothetical protein UM04607.1 [Ustilago maydis 521]
          Length = 1047

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 107/275 (38%), Gaps = 47/275 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD-----HYGITQVV-ANPDSACFEIAKSVRSEWVLCID 74
           V + GW+   R    I FL++ D        +  VV ++ DS   ++    R   +    
Sbjct: 588 VDVKGWLRSTRKQKSITFLELSDGSLSGSRSLQAVVRSSKDSPTSDMD---RLAGLTVGT 644

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLP------------------VF 115
            L ++          I  +IEL A  +++LS  +   PL                     
Sbjct: 645 ALRLTGHLRPGRGTKIGQEIELDASSVQVLSNCDLTYPLAAVQMQHNSTAIEQGGYSATL 704

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
            ER  P  +    R+  + R         R+R+ ++M   + + +F++ + P+LT+S  E
Sbjct: 705 AERRNPHLLGRLPRYAAVAR--------TRSRLEHAMGEFLASHDFVKVACPVLTSSDCE 756

Query: 176 GA-------RDFLVPSRVNQGSFYALPQA----PQQYKQLLMASGFDRYFQIAPCFRDED 224
           GA        D    S+ +  +F++   A      Q        G  R +   P FR E 
Sbjct: 757 GAGEVFQVVADSDARSKHDPAAFWSGSHAYLSVSSQLHLEAAGLGLGRVWTCNPAFRAEG 816

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
             ++R   EF+ L+ EM F +   IL+  E +++ 
Sbjct: 817 SATNRHLAEFWMLEAEMYFTDLAGILHVTEQMIKA 851


>gi|317968463|ref|ZP_07969853.1| lysyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 499

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 448 ALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPL 484



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 114/267 (42%), Gaps = 11/267 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V   R  G + F  + D  G  Q+    + A  E A    +  V   D + +  
Sbjct: 53  VSVAGRVMTRRVMGKLAFFTLADETGPIQLFI--EKATLEEAFGHLTSLVDAGDLIGVKG 110

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           S    +     G++ +  +  ++LS + + PLP           R++ R+LDL      +
Sbjct: 111 SLRRTD----RGELSVKVKSWQMLSKSLQ-PLPDKWHGLADVEKRYRQRYLDLIVSPDTR 165

Query: 141 NIVKRTRI-INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF-YALPQAP 198
              +R  I ++S+R  +    F+E  TP+L  S P GA      +  N       L  A 
Sbjct: 166 ETFRRRAIAVSSIRRWLDERGFLEIETPVLQ-SVPGGADARPFETHHNALDLPLTLRIAT 224

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+  GF+R +++   FR+E   +   P EF  +++  ++ + +D+++  E ++ 
Sbjct: 225 ELHLKRLVVGGFERVYELGRIFRNEGISTRHNP-EFTSIEVYQAYADYNDMMDLTEQLIA 283

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRR 285
            V ++      +S     I      RR
Sbjct: 284 HVCQQVCGTTRISYQGTEIDLTPPWRR 310


>gi|7007427|dbj|BAA90843.1| LysS [Bacillus halodurans]
          Length = 310

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 264 SLEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFP 299


>gi|260434775|ref|ZP_05788745.1| lysyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260412649|gb|EEX05945.1| lysyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 502

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 452 ALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPL 488



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 66/304 (21%), Positives = 124/304 (40%), Gaps = 32/304 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V   R  G + F  + D  G  Q+    + A  E   + ++ W   I  LV S 
Sbjct: 53  VSVAGRVMTRRVMGKLAFFTLADETGSIQLFL--EKAGLE---AQQAGWFKQITSLVDSG 107

Query: 81  SAETINANIIT---GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---- 133
               ++  +     G++ +      +L+ A + PLP           R++ R+LDL    
Sbjct: 108 DWLGVSGTLRRTDRGELSVKVSDWRMLTKALQ-PLPDKWHGLADVEKRYRQRYLDLVVSP 166

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF- 191
             R+T  +    R R+++ +R  +   +F+E  TP+L  S P GA      +  N     
Sbjct: 167 DSRETFRR----RARLVSGIRRWLDQRDFLEIETPVL-QSEPGGADARPFETHHNALDLP 221

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  A + + + L+  GF+R +++   FR+E   +   P EF  +++  ++ +   ++ 
Sbjct: 222 LTLRIATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP-EFTSVEIYQAYSDYIGMME 280

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E ++  V +E     T++     I      RR             MH + +     +F
Sbjct: 281 LTEQMVSAVCQEVCGTTTITYQGTEIDLAPPWRR-----------ATMHELVQDATGLDF 329

Query: 312 RVFS 315
             FS
Sbjct: 330 NSFS 333


>gi|84386961|ref|ZP_00989985.1| lysyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84378251|gb|EAP95110.1| lysyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 323

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 12/116 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS-------NV 511
           F   Q  +  +  ND     A ++++   G E+A+G       +  LQ F         +
Sbjct: 213 FPASQAALAKINPND--PRVADRFEVYFKGIELANGFHELDKPQEQLQRFEGDNAKRIEM 270

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+S + +++    L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP  ++
Sbjct: 271 GLSPQPIDHH---LIEALKAGLPDCAGVALGIDRLIMLALGYDHIDDVTAFPFPRS 323


>gi|260914055|ref|ZP_05920528.1| asparagine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631688|gb|EEX49866.1| asparagine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 467

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 109/274 (39%), Gaps = 44/274 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACF--EIAKSVRSEWVL 71
           +G  V + GW+   R    G+ FL I D   +   Q + N D   +  E+ + + +   +
Sbjct: 17  IGEKVTIRGWIRTRRDSKAGLSFLAIYDGSCFDPIQAIVNNDIENYASEVLR-LTTGCSV 75

Query: 72  CIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYR 129
            + G V+   AE        GQ +EL A+ +E+    E+    P+  +R    SI +   
Sbjct: 76  IVTGTVVESPAE--------GQAVELQAENVEVTGWVEDPETYPMAAKRH---SIEYLRE 124

Query: 130 FLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
              LR  T     V R R  +  ++      + F   +TP++TAS  EGA +     RV+
Sbjct: 125 VAHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMF---RVS 181

Query: 188 QGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRS 227
                 LP+  +                    Q      A    + +   P FR E+  +
Sbjct: 182 TLDLENLPRDDKGAVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNT 241

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            R   EF+ ++ E++F    D     E++L+ VF
Sbjct: 242 TRHLAEFWMIEPEVAFATLADNAKLAEDMLKYVF 275


>gi|308235835|ref|ZP_07666572.1| lysyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311114421|ref|YP_003985642.1| lysyl-tRNA synthetase [Gardnerella vaginalis ATCC 14019]
 gi|310945915|gb|ADP38619.1| lysyl-tRNA synthetase [Gardnerella vaginalis ATCC 14019]
          Length = 557

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL------YRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +      +        A   GMP
Sbjct: 466 KWDLYVRGFELATG--YSELNDPVVQRERFVAQAKDALAGDVEAMDIDEDFIEALGVGMP 523

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 524 PAGGMGMGIDRLLIALTGA-TIRETITFPL 552



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 20/236 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFEIAKSVRSEWVLC----IDG 75
           V ++G V  +R  GG+ F+ +    G T Q + +      E  KS +    L     + G
Sbjct: 121 VGIAGRVLFLRNAGGLCFVKLAAGDGTTIQAMVSKKEIGEESIKSFKQMVDLGDHLYVRG 180

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V+S           TG++ + A +  I + A + PLP    +E  +  R +  ++ +  
Sbjct: 181 RVISSK---------TGELSVFATEWAIAAKALQ-PLPAL-HKELSDDTRTRKPYIGMIA 229

Query: 136 DTLHKNIVKR-TRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193
           D   +++V+R +  + S+R    + +F+E  TP+L T      AR F           Y 
Sbjct: 230 DEKIRDMVRRRSHAVASLRRTFDSHDFLEVETPMLQTVHGGAAARPFTTHMNAFDIDLY- 288

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           L  AP+ + +  +  G DR F+I   FR+E   +   P EF  L+   ++   D I
Sbjct: 289 LRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAP-EFTMLEAYQAYGTYDTI 343


>gi|164686176|ref|ZP_02210206.1| hypothetical protein CLOBAR_02614 [Clostridium bartlettii DSM
           16795]
 gi|164601778|gb|EDQ95243.1| hypothetical protein CLOBAR_02614 [Clostridium bartlettii DSM
           16795]
          Length = 465

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 63/304 (20%), Positives = 117/304 (38%), Gaps = 51/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V+++GW+   R      F+++ D   +   Q+V +     F EI K   S  +L    LV
Sbjct: 23  VKVAGWIRTSRMSKNFGFIELNDGSFFKNMQIVIDEKLENFKEIGKLPISTSLLIEGTLV 82

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +++A+          +E+ A KI ++    +   P+  +R   E +R     L  R + 
Sbjct: 83  ATQNAKQ--------PVEIQATKI-VVEGESDNSYPLQKKRHTVEYLR-TIAHLRPRSNL 132

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+    ++       NF+   +PI+T S  EGA +    + ++          
Sbjct: 133 FSAAFRVRSVAAYAIHKFFQDRNFVYAHSPIITGSDCEGAGEMFRLTTLDLNDVPKTEDG 192

Query: 198 PQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              Y Q                  +MA  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 193 KVDYSQDFFGKEANLTVSGQLNAEIMALAFRNVYTFGPTFRAENSYTGRHASEFWMIEPE 252

Query: 241 MSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLRICY 279
           ++F + +D +   E++++ +            EF N              V++ F+RI Y
Sbjct: 253 IAFADLEDNMELAEDMIKYIINYVLENCPEEMEFFNSFVDKGLLERLHKIVNSEFIRITY 312

Query: 280 DDAI 283
             AI
Sbjct: 313 TKAI 316



 Score = 38.1 bits (87), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G  R    ++++      G+++E     +       + G   H G   
Sbjct: 380 DLLVPGVGEIIGGSQREERYDLLMDRIKECGLNEE----DYWWYLELRKYGTATHSGFGL 435

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +RI+M L G  N+R+V  FP +
Sbjct: 436 GFERIIMYLTGISNIRDVIPFPRT 459


>gi|302336409|ref|YP_003801616.1| lysyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301320249|gb|ADK68736.1| lysyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 697

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 9/58 (15%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           RA + GMPP GGI  GIDR+VML      +R+V LFP  +         P  V+ EQ+
Sbjct: 461 RALEYGMPPAGGIGFGIDRMVMLFCDQPAIRDVLLFPQMK---------PEAVTREQI 509



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 11/177 (6%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRII 149
           GQ+ +S   + +LS +   PLP          +R++ R++DL   RD +      R+ I+
Sbjct: 129 GQLSVSPTSVTLLSKSVR-PLPEKFHGLTDRELRYRQRYVDLIMNRD-VRDTFRMRSAIV 186

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           + +R  M ++ +IE  TP++ A      AR F+        +FY L  A +   + L+  
Sbjct: 187 SQIRRYMESDGYIEVETPMMHAILGGANARPFVTHFNALDRNFY-LRIATELPLKRLIVG 245

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           G +R F+I   FR+E       P EF  ++   ++ +    L  M+++  G+F+  +
Sbjct: 246 GMERVFEIGRQFRNEGMDLTHNP-EFTSMEAYCAYSD----LQGMKDLTMGLFKAIA 297


>gi|169806401|ref|XP_001827945.1| asparaginyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|263511651|sp|A9CTP8|SYNC_ENTBH RecName: Full=Probable asparaginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|161779013|gb|EDQ31040.1| asparaginyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 458

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 18/155 (11%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           +  ++ ++R      N+ E + P L  +  EG       +  +Q ++  L Q+ Q Y + 
Sbjct: 158 QNELLKALRKFYWNNNYTEITPPTLVQTQVEGGATLFKLNYYDQPAY--LTQSSQLYLET 215

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           + A    + F I P +R E  ++ R   EF  ++ E+  ++ D++++ +E ++R    EF
Sbjct: 216 V-APVVGKAFCIMPSYRAEKSKTSRHLSEFTHVEAELVDIQFDELMDQIEQLIRSTINEF 274

Query: 265 SNG-----NTVSNNFL----------RICYDDAIR 284
                     + N+F           +I Y+DAI 
Sbjct: 275 YKNILPEIKKIDNDFQPVVLSDKQFKKITYEDAIH 309


>gi|325286737|ref|YP_004262527.1| Asparaginyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324322191|gb|ADY29656.1| Asparaginyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 477

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 105/261 (40%), Gaps = 32/261 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V +SGWV   R +    F+ + D   I   Q V + +     + K V +   + + G ++
Sbjct: 19  VTVSGWVKTFRSNR---FIALNDGSTIQNIQCVVDFEKLDESLLKQVSTGAAIKVKGTLV 75

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
               +        GQ +E+    +EI   A+    P+  ++   E +R K   L +R +T
Sbjct: 76  ESQGK--------GQSVEIQVASLEIHGGADPETYPIQPKKHTLEFLREKAH-LRVRTNT 126

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--------G 189
               +  R+ +  ++        F    TPI+T S  EGA +    S ++         G
Sbjct: 127 FSAVMRMRSALSFAVHQYFQQNGFYHVHTPIITGSDAEGAGEIFKVSTLDSKKPPLKEDG 186

Query: 190 S------FYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           S      F+          Q +    A G  + +   P FR E+  + R   EF+ ++ E
Sbjct: 187 SVDYSEDFFGKETNLTVSGQLEAETYAMGLGKVYTFGPTFRAENSNTSRHLAEFWMIEPE 246

Query: 241 MSFVEQDDILNTMENVLRGVF 261
           M+F + D  ++  E+ ++ V 
Sbjct: 247 MAFYDLDANMDLAEDFIKSVL 267


>gi|239916712|ref|YP_002956270.1| lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
           [Micrococcus luteus NCTC 2665]
 gi|281414830|ref|ZP_06246572.1| lysyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|239837919|gb|ACS29716.1| lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
           [Micrococcus luteus NCTC 2665]
          Length = 504

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 21/214 (9%)

Query: 67  SEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           +EW   +D G  +S + E I +    G++ + A   E+ S A   PLPV    +  E  R
Sbjct: 112 AEWKKVVDLGDFLSVTGEVIVSR--RGELSIMASAWEMASKALR-PLPVL-HADLNEETR 167

Query: 126 FKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
            + R+ DL  R+   + +  R ++ +++R  +    ++E  TP+L      GA     P 
Sbjct: 168 VRQRYADLIVREEARRMVYTRAKVTSAVRRTLEGHGYVEVETPMLQLVHG-GA--LARPF 224

Query: 185 RVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
             +  +F     L  A + Y +  +  G DR F+I   FR+E   S   P EF  L+   
Sbjct: 225 ETHLNAFDQPMTLRIATELYLKRAVVGGIDRVFEIGRVFRNEGVDSTHSP-EFTTLESYE 283

Query: 242 SFVE--------QDDILNTMENVLRGVFEEFSNG 267
           ++ +        Q+ ILN  + V  G   E + G
Sbjct: 284 AWADMHVMAERMQEIILNAADAVGAGRRLETAKG 317



 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + G PP GGI  GIDR+VML   A  +RE  LFP+
Sbjct: 463 RALEYGAPPMGGIGLGIDRLVMLFTDA-GIRETILFPL 499


>gi|116074402|ref|ZP_01471664.1| lysyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116069707|gb|EAU75459.1| lysyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 497

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 452 ALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPL 488



 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 128/303 (42%), Gaps = 30/303 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V   R  G + F  + D  G  Q+    + A  E   + +  W   I  LV S 
Sbjct: 53  VAVAGRVMTRRVMGKLAFFTLADETGTIQLFL--EKAGLE---AQQEGWFKQITSLVDSG 107

Query: 81  SAETINANII-TGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL--RRD 136
               ++  +  T + ELS +  +   +++ L PLP           R++ R+LDL    D
Sbjct: 108 DWLGVSGTLRRTDRGELSVKVSDWRMLSKSLQPLPDKWHGLADVEKRYRQRYLDLVVSPD 167

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF-YALP 195
           T  +   +R R+++ +R  +   +F+E  TP+L  S P GA      +  N       L 
Sbjct: 168 T-RETFRRRARLVSGIRRWLDERDFLEIETPVLQ-SEPGGADARPFETHHNALDLPLTLR 225

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + + + L+  GF+R +++   FR+E   +   P EF  +++  ++ +   ++   E 
Sbjct: 226 IATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP-EFTSVEIYQAYSDYIGMMELTEQ 284

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEHFVHSEFR 312
           ++  V +E             +C    I   GT+  DL  P     MH + E     +F 
Sbjct: 285 MVAAVCQE-------------VCGSTKITYQGTEV-DLTPPWRRATMHELVEDATGLDFN 330

Query: 313 VFS 315
            FS
Sbjct: 331 GFS 333


>gi|71899836|ref|ZP_00681986.1| Asparaginyl-tRNA synthetase, class IIb [Xylella fastidiosa Ann-1]
 gi|71730427|gb|EAO32508.1| Asparaginyl-tRNA synthetase, class IIb [Xylella fastidiosa Ann-1]
          Length = 466

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 121/320 (37%), Gaps = 61/320 (19%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVV--ANPDSACFEIAKSVRS 67
           G   VGS V + GWV   R    G+ F+ + D   +   QVV  A+  +   E+ K    
Sbjct: 12  GKIQVGSEVTVRGWVRTRRDSKAGLSFVSVSDGSCFAAIQVVTPAHLPNYETEVRKLTTG 71

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             V+ I  L +S             Q E+ AQ IE++   E+        +++  S+ F 
Sbjct: 72  CAVIVIGTLALSLGQGQ--------QFEIQAQSIEVVGWVEDPETYPIQPKQH--SLEFL 121

Query: 128 YRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSR 185
                LR R  L   + +    ++    R   EN +   +TPI+T S  EGA       R
Sbjct: 122 REVAHLRPRTNLFGAVARIRHCLSQAVHRFFHENGYYWITTPIITTSDAEGAGQMF---R 178

Query: 186 VNQGSFYALPQAPQQ----------YKQLLMASG----------FDRYFQIAPCFRDEDP 225
           V+      LP+               +  L  SG            + +  +P FR E+ 
Sbjct: 179 VSTLDLVNLPRTETGGIDFSHDFFGKETFLTVSGQLNVEAYALALSKVYTFSPTFRAENS 238

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE--------------EFSNGNTVS 271
            + R   EF+ ++ E++F +  +     E  L+ +F+              E     T+S
Sbjct: 239 HTPRHLAEFWMIEPEIAFADLAEDARVAEQFLKFLFKTVLEERDDDLAFITERVEKTTIS 298

Query: 272 -------NNFLRICYDDAIR 284
                  + F RI Y DAI+
Sbjct: 299 KLEGFINSPFERIEYTDAIK 318


>gi|66807931|ref|XP_637688.1| leucyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|60466120|gb|EAL64185.1| leucyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 615

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 72/142 (50%), Gaps = 6/142 (4%)

Query: 122 ESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARD 179
           + IR++ R LD L   T  K    R+++I  +R  ++ + ++E  TPIL+ +     A+ 
Sbjct: 247 KEIRYRNRPLDFLVNPTTQKPFYIRSKMITYLRKFLVEKGYLEVDTPILSTNVGGANAKP 306

Query: 180 FLVPSR-VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           F   S  +N   F  +  +P+ + + L+ SGFD+ F+I   FR+E       P EF   +
Sbjct: 307 FKTHSNSLNLDLFLRI--SPELFLKQLIISGFDKVFEIGKQFRNEGIDLTHNP-EFTTCE 363

Query: 239 MEMSFVEQDDILNTMENVLRGV 260
              ++ + + ++   E +L G+
Sbjct: 364 FYQAYADYETMMTMTEELLSGM 385


>gi|313835252|gb|EFS72966.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314928489|gb|EFS92320.1| lysyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314970100|gb|EFT14198.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
          Length = 494

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 8/170 (4%)

Query: 95  ELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSM 152
           ELS    E    A+ L PLP    +E  E  R + R++DL  R+   + +  R  I  ++
Sbjct: 128 ELSIMAAEWRMAAKALRPLPTL-HKELSEETRVRRRYVDLVVREESRQMVRTRAAITRAV 186

Query: 153 RCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGF 210
           R  +    F+E  TPIL        AR F   + +N      +L  A + Y +  M  G 
Sbjct: 187 RRALDERGFLEIETPILQLVHGGAAARPF--NTHLNAFDLDMSLRIALELYLKRAMVGGT 244

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           DR +++   FR+E   S     EF  L+  MS+  Q  I   +++++  V
Sbjct: 245 DRVYEMGRVFRNEGIDSSH-SAEFSMLEAYMSWGNQFTIAEVIKDIIMAV 293



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 15/92 (16%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---------YRAFQCG 532
           +DL+  G E  +G      SE++        ++K+ +    G L           A + G
Sbjct: 404 WDLIIGGMERGTG-----FSELVDPVIQREVLTKQSLAAAAGDLEAMQLDEDFLEALEFG 458

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            PP GG+  G+DR+VML   A  +RE  LFP+
Sbjct: 459 CPPMGGLGLGVDRLVMLFTNA-GIRETILFPL 489


>gi|50556164|ref|XP_505490.1| YALI0F16291p [Yarrowia lipolytica]
 gi|49651360|emb|CAG78299.1| YALI0F16291p [Yarrowia lipolytica]
          Length = 582

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 2/150 (1%)

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             RF+ R+LDL   D+  +  + R++II  +R  +  ++FIE  TP++   +        
Sbjct: 220 ETRFRQRYLDLIMNDSTRERFIVRSKIIQYIRKFLDNKDFIEVETPMMNIIAGGATAKPF 279

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           V    +      +  AP+ Y + L+  G +R ++I   FR+E       P EF   +   
Sbjct: 280 VTHHNDLNLDMYMRIAPELYLKQLVVGGMERVYEIGRQFRNEGIDQTHNP-EFTTCEFYE 338

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           ++ +  D++ T E +   + +E + G  + 
Sbjct: 339 AYADVYDLMETTELLFSEMVKEITGGYKIE 368



 Score = 40.4 bits (93), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   G+DR+ M L  +  ++EV LFP
Sbjct: 532 ALEYGLPPTAGWGCGVDRLTMFLTNSNTIKEVLLFP 567


>gi|255718281|ref|XP_002555421.1| KLTH0G08954p [Lachancea thermotolerans]
 gi|238936805|emb|CAR24984.1| KLTH0G08954p [Lachancea thermotolerans]
          Length = 524

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 1/124 (0%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
           H  +  R  +++++R  + A  F+E  TP+L+  +   A +          +   L  AP
Sbjct: 191 HDALRVRHSVLSALREFLDARGFLEAETPVLSPKANGAAAEPFTTRTNATNAALQLRVAP 250

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+ +G DR +++   FR+E   +   P EF  L+   ++   +D++   E +L 
Sbjct: 251 ELWLKRLVVAGVDRVYELGRVFRNEGVDASHNP-EFTTLEFYQTYASMEDLIALAEQLLL 309

Query: 259 GVFE 262
            V E
Sbjct: 310 HVLE 313



 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 10/101 (9%)

Query: 470 KGN---DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG--- 523
           KGN   D+L+ K F+  +   G E  +     +  +  LQ F     ++E   +R     
Sbjct: 417 KGNPDDDMLTTKRFE--VFIGGKEYINAYEEENCPQAQLQKFEAQQQAQEAYGDRESLAI 474

Query: 524 --GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                 A + GMPP GG   GIDR+ MLL G   +  V  F
Sbjct: 475 DHAYVDAMKWGMPPIGGFGVGIDRLCMLLTGDTRIERVLSF 515


>gi|167629421|ref|YP_001679920.1| lysyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592161|gb|ABZ83909.1| lysyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 264

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 100/231 (43%), Gaps = 21/231 (9%)

Query: 5   RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---C 58
           RTH   D+     +     VRL+G +   R  G   F +++D  G  Q+    D      
Sbjct: 38  RTHHAEDIKAGFDALENQTVRLAGRMMARRHQGKAGFGNLQDITGQIQIYVRRDDVGHEV 97

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE 117
           FE+        +  ++G V              G+I +  ++  +L+ +   LP    G 
Sbjct: 98  FELFAKADIGDIYGVEGHVFKTQ---------KGEISIWVKQFVLLTKSLRPLPEKFHGL 148

Query: 118 REYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
           ++    +R++ R+LDL  +  + +  V R++II ++R  +    ++E  TP+L   +   
Sbjct: 149 KDV--ELRYRQRYLDLIMNPEVKRTFVLRSKIIRAVREFLDERGYLEVETPVLHPIAGGA 206

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
            AR F+          Y +  A + + + L+  GF+R +++   FR+E  R
Sbjct: 207 TARPFITHHNALDMKLY-MRIALELHLKRLIVGGFERVYELGRIFRNEGSR 256


>gi|153835339|ref|ZP_01988006.1| asparaginyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148868153|gb|EDL67310.1| asparaginyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 472

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 107/275 (38%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V          
Sbjct: 22  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYDD 69

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 70  EVLKLTTGCSVEVTGKIVESPAKGQDFELAATNVKVVGWVEDADTYPMAKTRH---SIEY 126

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 127 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 186

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     +    Y +        L  SG            + +   P FR E+  +
Sbjct: 187 TLDMENLPRTEEGKVDYNEDFFGKETFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNT 246

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + +DI    E++L+ VF+
Sbjct: 247 SRHLAEFWMVEPEVAFADLNDIAKLSEDMLKYVFK 281



 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D++  G  EI  G  R    +++ +    +GI  E + N +  L R    G  PH G   
Sbjct: 387 DVLAPGIGEIIGGSQREERLDILDERMREIGIDPEHM-NWYRDLRR---YGTVPHAGFGL 442

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +R+V  + G  NVR+V  FP +
Sbjct: 443 GFERLVSYVTGMGNVRDVIPFPRT 466


>gi|78183738|ref|YP_376172.1| lysyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|123729968|sp|Q3B0J9|SYK_SYNS9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78168032|gb|ABB25129.1| Lysyl-tRNA synthetase, class-2 [Synechococcus sp. CC9902]
          Length = 502

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 452 ALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPL 488



 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 127/306 (41%), Gaps = 36/306 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V   R  G + F  + D  G  Q+    + A  E   + +  W   I  LV + 
Sbjct: 53  VAVAGRVMTRRVMGKLAFFTLADETGTIQLFL--EKAGLE---AQQEGWFKQITSLVDAG 107

Query: 81  SAETINANII-TGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL----- 133
               ++  +  T + ELS +  +   +++ L PLP           R++ R+LDL     
Sbjct: 108 DWLGVSGTLRRTDRGELSVKVRDWRMLSKSLQPLPDKWHGLADVEKRYRQRYLDLIVSPQ 167

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            R+T  +    R  +++ +R  +    F+E  TP+L + +    AR F+          Y
Sbjct: 168 SRETFRR----RALLVSGIRRWLDERQFLEIETPVLQSEAGGADARPFITHHNTLDLPLY 223

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + + + L+  GF+R +++   FR+E   S R   EF  +++  ++ +   ++  
Sbjct: 224 -LRIATELHLKRLVVGGFERVYELGRIFRNEG-MSTRHNPEFTSVEVYQAYSDYIGMMEL 281

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEHFVHS 309
            E ++  V ++   G        RI Y       GTD  DL  P     MH + E     
Sbjct: 282 TEAMIAEVCQQVCGGT-------RIHYQ------GTDI-DLTPPWRRATMHELVEEATGL 327

Query: 310 EFRVFS 315
            F  F+
Sbjct: 328 NFEAFT 333


>gi|54298179|ref|YP_124548.1| asparaginyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|81370098|sp|Q5X300|SYN_LEGPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|53751964|emb|CAH13388.1| asparagine tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 467

 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 120/303 (39%), Gaps = 45/303 (14%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACF- 59
           +    C D  +S +   V + GWV   R    G+ F+ + D   +   Q+VA    + + 
Sbjct: 5   FTIKQCLDGEIS-IDETVTVRGWVKTRRDSKAGLSFISLHDGSCFSPIQIVATDQLSNYH 63

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEEL-PLPVFG 116
            E+ K      ++    LV S+           GQ  E+ A+ IE++   E     P+  
Sbjct: 64  KEVTKLTAGCSMIATGKLVASQGK---------GQFFEIQAESIEVVGWVENPDTYPIQA 114

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           +R   E +R +   L  R +T+      R  +  ++      + F    TPI+TAS  EG
Sbjct: 115 KRHTLEFLR-EVAHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEG 173

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQY----------KQLLMASG----------FDRYFQI 216
           A +     RV+      +P+  +            +  L  SG            + +  
Sbjct: 174 AGEMF---RVSTLDLLNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMSKVYTF 230

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR----GVFEEFSNGNTVSN 272
            P FR E+  + R   EF+ ++ E++F   +DI    +++LR     V EE ++     N
Sbjct: 231 GPTFRAENSNTSRHLAEFWMIEPEIAFANLEDICKLSQSMLRYLCKTVLEERADDMDFFN 290

Query: 273 NFL 275
            F+
Sbjct: 291 QFV 293



 Score = 37.0 bits (84), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 6/82 (7%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIAAGIDRIVM 548
           EI  G  R    E++ +      ++KE  +      YR  +  G  PH G   G +R++ 
Sbjct: 390 EIIGGSQREERLEILDRRMDECNLNKEHYQ-----WYRDLRRYGTVPHAGFGLGFERLIS 444

Query: 549 LLLGAKNVREVSLFPMSQNFCD 570
            + G  NVR+V  FP +    D
Sbjct: 445 YVTGVSNVRDVIPFPRTPGHAD 466


>gi|225571192|ref|ZP_03780190.1| hypothetical protein CLOHYLEM_07280 [Clostridium hylemonae DSM
           15053]
 gi|225160023|gb|EEG72642.1| hypothetical protein CLOHYLEM_07280 [Clostridium hylemonae DSM
           15053]
          Length = 478

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 111/309 (35%), Gaps = 61/309 (19%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + + GWV  +R      F           +V N D   FE  + V    +   D +    
Sbjct: 36  ITVGGWVRSIRDSKAFGF-----------IVVN-DGTFFEPLQVVYHNTMDNFDEISRLN 83

Query: 81  SAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYP-ESIRFKYRFL----DLR 134
               I   I+TG +  + Q  +   + A+E+ +      +YP +  R  + +L     LR
Sbjct: 84  VGAAI---IVTGTLVATPQAKQPFEIQAKEITVEGASAPDYPLQKKRHSFEYLRTIAHLR 140

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             T     V R R + +       +   F+   TPI+T S  EGA +    + ++  S  
Sbjct: 141 PRTNTFQAVFRVRSLTAYALHKFFQERGFVYVHTPIITGSDCEGAGEMFRVTTLDMQSIP 200

Query: 193 ALPQAPQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                   Y Q                    A  F   +   P FR E+  + R   EF+
Sbjct: 201 KDDSGKVDYSQDFFGKETSLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAEFW 260

Query: 236 QLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNF 274
            ++ EM+F + DD +   E +L+ V              F  F +        N VS+ F
Sbjct: 261 MIEPEMAFADLDDDMMLAEAMLKYVISYVLEQAPEEINFFNSFVDKGLLERLNNVVSSEF 320

Query: 275 LRICYDDAI 283
            R+ Y +A+
Sbjct: 321 ARVTYTEAV 329



 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G   H G   G +R +M L G  N+R+V  FP + N C+L
Sbjct: 437 KYGSTRHSGFGLGFERCIMYLTGMGNIRDVVPFPRTVNNCEL 478


>gi|326491469|dbj|BAJ94212.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326502506|dbj|BAJ95316.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 220

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF----QCGMPPH 536
           +++L  N  E+ +     +   V  Q F +   S++  ++    L  AF    +  +PP 
Sbjct: 126 RFELFINKHEVCNAYTELNDPLVQRQRFEDQLRSRQSGDDEAMALDEAFCTALEYALPPT 185

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDRI MLL  ++N++EV LFP
Sbjct: 186 GGWGMGIDRIAMLLTDSQNIKEVLLFP 212


>gi|315636083|ref|ZP_07891339.1| lysine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479603|gb|EFU70280.1| lysine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 502

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 11/243 (4%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +   R  G   FL I D  G+ Q+    D+        +  + +   D + +S   
Sbjct: 60  VAGRIKFFRLMGKASFLKIEDESGMLQIYVARDNLPENFYNEIFKKNIEVGDIIEVS--- 116

Query: 83  ETINANIITGQIELS--AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LH 139
                  +TG  ELS  A  ++IL+ A   PLP        + +R++ R+LDL  ++ + 
Sbjct: 117 ---GYPFVTGHGELSLHADSLKILTKAIS-PLPEKFHGIQDKELRYRQRYLDLIMNSEVR 172

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           K    R+++I+  R     + F+E  TP++   +        V      G    L  AP+
Sbjct: 173 KTFHIRSKVISLTRRFFENKGFLEVETPMMHPIAGGANAKPFVTHFNALGVDRFLRIAPE 232

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E   +   P EF  ++   ++    D++   +     
Sbjct: 233 LYLKRLIVGGFEAVFEINRNFRNEGMDATHNP-EFTSIEFYWAYKTYKDLIVLTKEYFEY 291

Query: 260 VFE 262
           +FE
Sbjct: 292 LFE 294



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 9/82 (10%)

Query: 491 IASGGIRNHMSEV-----MLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAA 541
           IA   I N  SE+      LQ F     +KE  ++    +      A   GM P  G   
Sbjct: 407 IAGKEIANAFSELNDPIDQLQRFEGQIAAKEAGDDEAHEMDEDFVNALSYGMAPTAGQGI 466

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           GIDR+VM+L    ++R+V LFP
Sbjct: 467 GIDRLVMMLTNEHSIRDVLLFP 488


>gi|289705689|ref|ZP_06502073.1| lysine--tRNA ligase [Micrococcus luteus SK58]
 gi|289557529|gb|EFD50836.1| lysine--tRNA ligase [Micrococcus luteus SK58]
          Length = 504

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 21/214 (9%)

Query: 67  SEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           +EW   +D G  +S + E I +    G++ + A   E+ S A   PLPV    +  E  R
Sbjct: 112 AEWKKVVDLGDFLSVTGEVIVSR--RGELSIMASAWEMASKALR-PLPVL-HADLNEETR 167

Query: 126 FKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
            + R+ DL  R+   + +  R ++ +++R  +    ++E  TP+L      GA     P 
Sbjct: 168 VRQRYADLIVREEARRMVYTRAKVTSAVRRTLEGHGYVEVETPMLQLVHG-GA--LARPF 224

Query: 185 RVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
             +  +F     L  A + Y +  +  G DR F+I   FR+E   S   P EF  L+   
Sbjct: 225 ETHLNAFDQPMTLRIATELYLKRAVVGGIDRVFEIGRVFRNEGVDSTHSP-EFTTLESYE 283

Query: 242 SFVE--------QDDILNTMENVLRGVFEEFSNG 267
           ++ +        Q+ ILN  + V  G   E + G
Sbjct: 284 AWADMHVMAERMQEIILNAADAVGAGRRLETAKG 317



 Score = 43.9 bits (102), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + G PP GGI  GIDR+VML   A  +RE  LFP+
Sbjct: 463 RALEYGAPPMGGIGLGIDRLVMLFTDA-GIRETILFPL 499


>gi|256397477|ref|YP_003119041.1| lysyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256363703|gb|ACU77200.1| lysyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 506

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 479 AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           A ++DLV  G EI +G          R   +E  L A      + ++ E+      RA +
Sbjct: 414 AERWDLVGWGAEIGTGYSELIDPVDQRERFTEQSLLAAGGDPDAMQLDED----FLRALE 469

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             MPP GGI  GIDRI+M L G + +RE  LFP
Sbjct: 470 YAMPPAGGIGVGIDRILMALTG-RLIRETILFP 501


>gi|302501169|ref|XP_003012577.1| hypothetical protein ARB_01190 [Arthroderma benhamiae CBS 112371]
 gi|291176136|gb|EFE31937.1| hypothetical protein ARB_01190 [Arthroderma benhamiae CBS 112371]
          Length = 556

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 27/213 (12%)

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMR 153
           EL A K++I  V E  P      + YP  I+ K+   D  R   H  +      +++ +R
Sbjct: 133 ELQATKVDI--VGEADPAASSSTQTYP--IQKKFHTPDFLRQLPHLRLRTPFNALLSRLR 188

Query: 154 CRMIAE-----------NFIECSTPILTASSPEGARD-FLVPSR---VNQGS---FYALP 195
              I +           NF++   P++T+S  EGA + F +  R   + +G    F+  P
Sbjct: 189 SEFIYQVTEEFRSHRDLNFVQVQPPLITSSDCEGAGEVFSIRPRDVVIEEGKAVEFFKSP 248

Query: 196 QAPQQYKQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           +      QL +   A+     + ++P FR E   + R   EFY L++EMS+++  + L  
Sbjct: 249 KYLTVSSQLHLEAYAAELGNVWTLSPTFRAEKSDTPRHLSEFYMLEVEMSYMDSLEPLTA 308

Query: 253 -MENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            +E +LR + +           F     DD  +
Sbjct: 309 FVETLLRNMTQRVYKSPVAQEIFSFKATDDLTK 341


>gi|227499836|ref|ZP_03929929.1| asparagine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227217945|gb|EEI83218.1| asparagine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 470

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 109/265 (41%), Gaps = 36/265 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCID 74
           V + V++ GW+   R    + F+++ D   +   Q+V   D + +             +D
Sbjct: 22  VDTEVKVYGWIRNQRFGKNVGFIELNDGTCFKNLQIVVGSDISNYN-----------ELD 70

Query: 75  GLVMSRSAETINANIITGQ----IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
              +S S E     + TG      E+ A++I++L  + +   P+  +R+  E +R     
Sbjct: 71  KQFLSTSLEVRGVLVKTGNSKNPYEIQAKEIKVLGESSD-KYPIQKQRQTLEYMR-TIPH 128

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV-------- 182
           L  R +T       R+ +  ++        F+  + PI+T+S  EGA +           
Sbjct: 129 LRARTNTYRAVFRVRSILAYALHNFFQQRGFVYINPPIVTSSDAEGAGEMFNITTIDPNN 188

Query: 183 PSRVNQGS------FYALPQAPQQYKQLL---MASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           P R   GS      F++         QL     A  F   +   P FR E+  + R   E
Sbjct: 189 PPRKEDGSVDFSKDFFSKKSYLTVSGQLEAEDYALAFGDVYTFGPTFRAEESNTPRHAAE 248

Query: 234 FYQLDMEMSFVEQDDILNTMENVLR 258
           F+ L+ EM+F + +  ++  E++++
Sbjct: 249 FWMLEPEMAFTDYNLAMDVAEDMIK 273


>gi|254284100|ref|ZP_04959068.1| lysyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219680303|gb|EED36652.1| lysyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 496

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G EIA+G    + +E   + F      KE  +     +   Y RA + GMPP 
Sbjct: 405 RFEFFVGGREIANGFSELNDAEDQAERFRAQVAEKEAGDEEAMHYDHDYVRALEYGMPPT 464

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 465 AGEGIGIDRLVMLLTDSPSIRDVLLFP 491



 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 82/189 (43%), Gaps = 18/189 (9%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           + +R++ R++DL  +   ++I + R+  IN +R  +    F+E  TP++        A+ 
Sbjct: 155 QELRYRQRYVDLIANPEVRDIFRVRSETINFIRRFLNDRGFMEVETPMMHPIPGGAAAKP 214

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L   GF++ +++   FR+E   +   P EF  L+ 
Sbjct: 215 FVTHHNALDMDMY-LRIAPELYLKRLTVGGFEKVYEVNRNFRNEGLSTRHNP-EFTMLEY 272

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  D ++  E +LR + +       V+              YG ++ D   P   
Sbjct: 273 YWAYADYRDAMDMTEQLLRELTQSVLGDTCVT--------------YGEEQFDFGKPFAR 318

Query: 300 HNVTEHFVH 308
             V E  +H
Sbjct: 319 MTVVEAILH 327


>gi|315054079|ref|XP_003176414.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311338260|gb|EFQ97462.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 563

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R + ++ + +A    G+  E  +  F      F+ G  PH G   
Sbjct: 476 YDFFMRGEEIMSGAQRINDAKELEEAMVARGV--EPNQEGFEDYINGFRQGCAPHAGGGL 533

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++RIV   LG  N+R  +LFP
Sbjct: 534 GLNRIVQFFLGLPNIRLATLFP 555



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 32/196 (16%)

Query: 94  IELSAQKIEILSVA-EELPLPVF-GEREYPESI-----------------RFKYRFLDLR 134
           +EL   KI ++S A   LP+ V   ER  PES                  R   R LDL+
Sbjct: 182 MELHITKIYMVSEAIPMLPMQVKDAERPPPESTEEGLVDTDGTPIVTLKTRLDNRILDLQ 241

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECS-----TPILTASSPEGARDFLVPSRVNQG 189
            +T    +      I+S   ++ +E  ++       T  +T ++ EG       S   + 
Sbjct: 242 TETSQAIMA-----ISSGVAQLFSEYMLKSGSRWIFTSKITGAATEGGSGVFEISYFKRK 296

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
           ++  L Q+PQ  KQ+ +A      F+I P FR ED  + R   EF  LD E +F +   +
Sbjct: 297 AY--LSQSPQLGKQMCIAGDMMSVFEIGPVFRAEDSNTHRHLTEFIGLDFERTFQKHYHE 354

Query: 249 ILNTMENVLRGVFEEF 264
           +L+  E++L  +  E 
Sbjct: 355 VLDFAEDLLVFILSEL 370


>gi|116071683|ref|ZP_01468951.1| lysyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116065306|gb|EAU71064.1| lysyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 502

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 452 ALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPL 488



 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 127/306 (41%), Gaps = 36/306 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V   R  G + F  + D  G  Q+    + A  E   + +  W   I  LV + 
Sbjct: 53  VAVAGRVMTRRVMGKLAFFTLADETGTIQLFL--EKAGLE---AQQEGWFKQITSLVDAG 107

Query: 81  SAETINANII-TGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL----- 133
               ++  +  T + ELS +  +   +++ L PLP           R++ R+LDL     
Sbjct: 108 DWLGVSGTLRRTDRGELSVKVRDWRMLSKSLQPLPDKWHGLADVEKRYRQRYLDLIVSPQ 167

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            R+T  +    R  +++ +R  +    F+E  TP+L + +    AR F+          Y
Sbjct: 168 SRETFRR----RALLVSGIRRWLDERQFLEIETPVLQSEAGGADARPFITHHNTLDLPLY 223

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + + + L+  GF+R +++   FR+E   S R   EF  +++  ++ +   ++  
Sbjct: 224 -LRIATELHLKRLVVGGFERVYELGRIFRNEG-MSTRHNPEFTSVEVYQAYSDYIGMMEL 281

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEHFVHS 309
            E+++  V ++             +C    I   GTD  DL  P     MH + E     
Sbjct: 282 TESMIAEVCQQ-------------VCGGTHIHYQGTDI-DLTPPWRRATMHELVEEATGL 327

Query: 310 EFRVFS 315
            F  F+
Sbjct: 328 NFEAFT 333


>gi|325961761|ref|YP_004239667.1| lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323467848|gb|ADX71533.1| lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 521

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 108/258 (41%), Gaps = 26/258 (10%)

Query: 5   RTHSCGDL--------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  ++             G  V ++G V  +R  G + F  +++  G T        
Sbjct: 57  RTHSLAEIREKYAHLQADDTTGDIVGVTGRVVFIRNTGKLCFATLQE--GGTDGKGTRLQ 114

Query: 57  ACFEIA---KSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           A   +A   +   ++W   +D G  +    E I++    G++ + A+   + S A   PL
Sbjct: 115 AMLSLANVGEEALADWKALVDLGDHVFIKGEVISSR--RGELSVMAESWSMASKALR-PL 171

Query: 113 PVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
           PV    +  E  R + R++DL  RD   + +  R  I  S+R  +   N++E  TPIL  
Sbjct: 172 PVL-HADLNEETRVRQRYVDLMVRDEAREMVYTRAAITRSIRETLFRHNYVEVETPILNL 230

Query: 172 SSPEGARDFLVPSRVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
               GA     P   +  +F     L  A + Y +  +  G DR + +   FR+E   S 
Sbjct: 231 VHG-GA--LARPFETHMNAFDQKMTLRIATELYLKRAVVGGIDRVYDMGRVFRNEGVDST 287

Query: 229 RLPGEFYQLDMEMSFVEQ 246
             P EF  L+   ++ +Q
Sbjct: 288 HSP-EFTTLECYEAWADQ 304



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + G PP GGI  GIDR+VML  GA  +RE  LFP+
Sbjct: 479 RALEYGAPPMGGIGLGIDRLVMLFTGA-GIRETILFPL 515


>gi|294635625|ref|ZP_06714101.1| asparagine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291091008|gb|EFE23569.1| asparagine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 466

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 102/269 (37%), Gaps = 32/269 (11%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           V + V + GWV   R    GI FL + D   +   Q V N     +E       E +   
Sbjct: 16  VDTEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPLQAVVNNSLPNYE------DEVLRLT 69

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLD 132
            G  +  S   + +       EL A  I ++   E+    P+  +R    SI +      
Sbjct: 70  TGCSVEVSGRVVASPGEGQSFELQATGIRVVGWVEDPDTYPMAAKRH---SIEYLREVAH 126

Query: 133 LRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T     V R R  +     R   EN +   STP++TAS  EGA +    S ++  +
Sbjct: 127 LRPRTNLIGAVARVRHTLAQAIHRYFHENGYFWVSTPLITASDTEGAGEMFRVSTLDMEN 186

Query: 191 FYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGE 233
                     Y +        L  SG            + +   P FR E+  + R   E
Sbjct: 187 LPRDAAGKVDYNEDFFGREAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHLAE 246

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           F+ ++ E++F + D I    E +L+ VF+
Sbjct: 247 FWMVEPEVAFADLDAIAGVAEGMLKYVFK 275


>gi|33864663|ref|NP_896222.1| lysyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|39932070|sp|Q7U9X5|SYK_SYNPX RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33632186|emb|CAE06642.1| lysyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 502

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 452 ALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPL 488



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 66/304 (21%), Positives = 122/304 (40%), Gaps = 32/304 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V   R  G + F  + D  G  Q+    + A  E   + +  W   I GLV   
Sbjct: 53  VSVAGRVMTRRVMGKLAFFTLADETGTIQLFL--EKAGLE---AQQEGWFKQITGLVDGG 107

Query: 81  SAETINANIIT---GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---- 133
               ++  +     G++ +      +L+ A + PLP           R++ R+LDL    
Sbjct: 108 DWLGVSGTLRRTDRGELSVKVSDWRMLTKALQ-PLPDKWHGLADVEKRYRQRYLDLIVSP 166

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF- 191
             R+T  +    R R+++ +R  +   +F+E  TP+L  S P GA      +  N     
Sbjct: 167 DSRETFRR----RARLVSGIRRWLDQRDFLEIETPVLQ-SEPGGADARPFETHHNALDLP 221

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  A + + + L+  GF+R +++   FR+E   +   P EF  +++  ++ +   ++ 
Sbjct: 222 LTLRIATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP-EFTSVEIYQAYSDYIGMME 280

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E ++  V +E      ++     I      RR             MH + E     +F
Sbjct: 281 LTEQMVSAVCQEVCGSCQITYQDTEIDLSPPWRR-----------ATMHELVEEATGLDF 329

Query: 312 RVFS 315
             FS
Sbjct: 330 NSFS 333


>gi|262375839|ref|ZP_06069071.1| lysyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262309442|gb|EEY90573.1| lysyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 509

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RD 179
            ++++ R+LDL   +   K    R +++  +R  +  + ++E  TP++    P GA  R 
Sbjct: 166 EVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTEKRYMEVETPMMHVI-PGGASARP 224

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F         S + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++ 
Sbjct: 225 FETHHNALDMSLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEF 282

Query: 240 EMSFVEQDDILNTMENVL 257
             ++ +  D++   E +L
Sbjct: 283 YQAYADYKDLMELTEQML 300



 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VM+   A ++R+V LFP
Sbjct: 467 ALEYGLPPTAGEGIGIDRLVMIFANAASIRDVILFP 502


>gi|260914411|ref|ZP_05920880.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260631512|gb|EEX49694.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 323

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 72/328 (21%), Positives = 132/328 (40%), Gaps = 41/328 (12%)

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKP--DLRNPII---------MHNVTEHFVHSE 310
           E +    +++N   R      IRR+ TD+   ++  P++         +   +  FV S 
Sbjct: 5   ENWRPSASINNLLTRAKIMAEIRRFFTDRGLLEVETPVLSEFGVTDVHLSTFSTQFV-SP 63

Query: 311 FRVFSKIL--SVNPGYEVWAIPAKGGGGNRAFCDRM-NEWARSQGQPGLAYIFWRLDESG 367
           F   SK L  S +P Y +  + A G G     C    NE +  +  P    + W      
Sbjct: 64  FGEQSKTLWLSTSPEYHMKRLLAAGSGPIFQLCHVFRNEESGHRHNPEFTMLEWYRPHFD 123

Query: 368 NVAGMGPVAKHLNIV----NTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
               +  V   L  +      E++  +   Q+     ++  DPL        A+   A++
Sbjct: 124 MYRLINEVDDLLQQILECPPAESLSYQFVFQE-----YVGLDPLSADKSELAAK---AKQ 175

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEE----EKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
             +++ +  +   ++ F F    E     E  +   H P T  Q  +  +   D    + 
Sbjct: 176 YHLLSADEEDRDTLLQFLFSTVVEPKIGLENPVAVYHFPAT--QAALAQISSEDHRVAER 233

Query: 480 FQYDL----VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           F++      + NGF E+     + H  E   +    +G+ +  ++ R  G   A Q G+P
Sbjct: 234 FEFYYKGLELANGFHELTDANEQYHRFEQDNRLREKMGLPQRDIDKRLLG---ALQAGVP 290

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              G+A G+DR++M+ LGA+N++EV  F
Sbjct: 291 NCSGVALGVDRLLMIALGAQNIQEVISF 318


>gi|163800697|ref|ZP_02194597.1| asparaginyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159175046|gb|EDP59843.1| asparaginyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 466

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 107/275 (38%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V          
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYDD 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKIVESPAKGQDFELAATDVKVVGWVEDADTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     +    Y +        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMENLPRTEEGKVDYNEDFFGKETFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + +DI    E++L+ VF+
Sbjct: 241 SRHLAEFWMVEPEVAFADLEDIAKLSEDMLKFVFK 275



 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D++  G  EI  G  R    +V+ +    VGI  E + N +  L R    G  PH G   
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLDERMREVGIDPEHM-NWYRDLRR---YGTVPHAGFGL 436

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +R+V  + G  NVR+V  FP +
Sbjct: 437 GFERLVSYVTGMGNVRDVIPFPRT 460


>gi|148359826|ref|YP_001251033.1| asparaginyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|296107873|ref|YP_003619574.1| asparaginyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|259511569|sp|A5IE87|SYN_LEGPC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148281599|gb|ABQ55687.1| asparaginyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|295649775|gb|ADG25622.1| asparaginyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 467

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 120/303 (39%), Gaps = 45/303 (14%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACF- 59
           +    C D  +S +   V + GWV   R    G+ F+ + D   +   Q+VA    + + 
Sbjct: 5   FTIKQCLDGEIS-IDETVTVRGWVKTRRDSKAGLSFISLHDGSCFSPIQIVATDQLSNYH 63

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEEL-PLPVFG 116
            E+ K      ++    LV S+           GQ  E+ A+ IE++   E     P+  
Sbjct: 64  KEVTKLTAGCSMVATGKLVASQGK---------GQFFEIQAESIEVVGWVENPDTYPIQA 114

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           +R   E +R +   L  R +T+      R  +  ++      + F    TPI+TAS  EG
Sbjct: 115 KRHTLEFLR-EVAHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEG 173

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQY----------KQLLMASG----------FDRYFQI 216
           A +     RV+      +P+  +            +  L  SG            + +  
Sbjct: 174 AGEMF---RVSTLDLLNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMSKVYTF 230

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR----GVFEEFSNGNTVSN 272
            P FR E+  + R   EF+ ++ E++F   +DI    +++LR     V EE ++     N
Sbjct: 231 GPTFRAENSNTSRHLAEFWMIEPEIAFANLEDICKLSQSMLRYLCKTVLEERADDMDFFN 290

Query: 273 NFL 275
            F+
Sbjct: 291 QFV 293


>gi|331083267|ref|ZP_08332380.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330404348|gb|EGG83893.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 463

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 30/260 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDG-LV 77
           V + GWV  VR      F+ + D   +   Q+V +     F+    +     + + G LV
Sbjct: 21  VTVGGWVRSVRDSKTFGFIVLHDGSFFETLQIVYHDTMENFQTISKLNVGAAIVVKGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+         +I+ +   +E  S A+    P+  +R   E +R     L  R +T
Sbjct: 81  ATPQAKQ------PFEIQATEIMVEGDSAAD---YPLQKKRHSMEYLR-TISHLRPRTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPS-------RVNQG 189
                  R+ I  ++      + F+   TP++T S  EGA + F V +       +  +G
Sbjct: 131 FQAVFKVRSLIAYAIHQFFQEQGFVYVHTPLITGSDCEGAGEMFQVTTMDLNDIPKTEEG 190

Query: 190 S------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+  P       QL     A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 191 KVDFSQDFFKKPTNLTVSGQLNGETFAQAFRNIYTFGPTFRAENSNTTRHAAEFWMIEPE 250

Query: 241 MSFVEQDDILNTMENVLRGV 260
           M+F + DD +   E++L+ V
Sbjct: 251 MAFSDLDDNMALAESMLKYV 270



 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E + Q    + +++E     +G      + G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDSYEKLSQRMKEMNLNEE----DYGFYLDLRKYGSTRHSGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G +N+R+V  FP + N C+L
Sbjct: 442 LTGMQNIRDVIPFPRTVNNCEL 463


>gi|310824351|ref|YP_003956709.1| asparaginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309397423|gb|ADO74882.1| Asparaginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 466

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 114/279 (40%), Gaps = 56/279 (20%)

Query: 19  SFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSAC---FEIAKSVRSEWVLC 72
           S V + GWV   R    G+ F+++ D   +   QVVA P+S      E+        V+C
Sbjct: 18  SKVEVRGWVRTRRDSKAGVSFINVSDGSCFDPIQVVA-PNSLPNYEKEVLHLTAGCSVIC 76

Query: 73  IDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              LV S+           GQ  E+ A++++++   E+          YP  I+ K   L
Sbjct: 77  RGTLVRSQG---------KGQAYEIQAEEVQVVGFVED-------PDTYP--IQPKQHTL 118

Query: 132 DLRRDTLHKNIVKRTRIINSM-RCRMIA----------ENFIECSTPILTASSPEGA--- 177
           +  R+  H  +  RT    ++ R R  A          E F   +TPI+TAS  EGA   
Sbjct: 119 EFLREVAH--LRSRTNTFGAISRVRHSAAQAIHRFFSEEGFFWVNTPIITASDTEGAGQL 176

Query: 178 -----RDFLVPSRVNQGS------FYALPQAPQQYKQLLMAS---GFDRYFQIAPCFRDE 223
                 D + P R + G       F+          QL + +      + +   P FR E
Sbjct: 177 FRVSTLDAVNPPRTDAGKIDWSKDFFGKESYLTVSGQLNVETYCCALSKVYTFGPTFRAE 236

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           +  + R   EF+ ++ E++F + +D     E  L+ VF+
Sbjct: 237 NSNTTRHLAEFWMIEPEVAFADLNDNATLAERFLKYVFK 275


>gi|297569276|ref|YP_003690620.1| lysyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925191|gb|ADH86001.1| lysyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 492

 Score = 47.4 bits (111), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 93/227 (40%), Gaps = 28/227 (12%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMS 79
           ++G V  +R  G   FL I+D  G  Q+    D      F + K +    ++   G +  
Sbjct: 57  VAGRVMALRKFGKAAFLHIQDESGRIQIHIKRDEVGDEPFAVFKKIDIGDIVAFTGPLFR 116

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR----- 134
                      TG++ + A  + +L+ +   PLP           R++ R++DL      
Sbjct: 117 TK---------TGEVTIQALSLRLLTKSLR-PLPEKFHGLTDIETRYRQRYVDLMVNPEV 166

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           RDT  K    R  II  +R  +    F+E  TP++ A +    A+ F           Y 
Sbjct: 167 RDTFRK----RVEIIRLIRDFLSNRGFMEVETPMMQAIAGGATAKPFKTHHNALGLDLY- 221

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG----EFYQ 236
           L  AP+ Y + L+  G +R F+I   FR+E   +   P     EFYQ
Sbjct: 222 LRIAPELYLKRLLVGGLERVFEINRNFRNEGLSTRHNPEFTMLEFYQ 268



 Score = 44.7 bits (104), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+ MLL  + ++R+V LFP
Sbjct: 448 RALEYGMPPAAGEGIGIDRLTMLLTDSPSIRDVILFP 484


>gi|331009251|gb|EGH89307.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 287

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 195 RFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPT 254

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 255 AGEGIGIDRLVMLLTDSPSIRDVILFP 281


>gi|313635100|gb|EFS01445.1| lysyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 166

 Score = 47.0 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL  A ++R++ LFP
Sbjct: 125 ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFP 160


>gi|115373136|ref|ZP_01460438.1| asparaginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115369892|gb|EAU68825.1| asparaginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 469

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 114/279 (40%), Gaps = 56/279 (20%)

Query: 19  SFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSAC---FEIAKSVRSEWVLC 72
           S V + GWV   R    G+ F+++ D   +   QVVA P+S      E+        V+C
Sbjct: 21  SKVEVRGWVRTRRDSKAGVSFINVSDGSCFDPIQVVA-PNSLPNYEKEVLHLTAGCSVIC 79

Query: 73  IDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              LV S+           GQ  E+ A++++++   E+          YP  I+ K   L
Sbjct: 80  RGTLVRSQG---------KGQAYEIQAEEVQVVGFVED-------PDTYP--IQPKQHTL 121

Query: 132 DLRRDTLHKNIVKRTRIINSM-RCRMIA----------ENFIECSTPILTASSPEGA--- 177
           +  R+  H  +  RT    ++ R R  A          E F   +TPI+TAS  EGA   
Sbjct: 122 EFLREVAH--LRSRTNTFGAISRVRHSAAQAIHRFFSEEGFFWVNTPIITASDTEGAGQL 179

Query: 178 -----RDFLVPSRVNQGS------FYALPQAPQQYKQLLMAS---GFDRYFQIAPCFRDE 223
                 D + P R + G       F+          QL + +      + +   P FR E
Sbjct: 180 FRVSTLDAVNPPRTDAGKIDWSKDFFGKESYLTVSGQLNVETYCCALSKVYTFGPTFRAE 239

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           +  + R   EF+ ++ E++F + +D     E  L+ VF+
Sbjct: 240 NSNTTRHLAEFWMIEPEVAFADLNDNATLAERFLKYVFK 278


>gi|332685897|ref|YP_004455671.1| asparaginyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332369906|dbj|BAK20862.1| asparaginyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 464

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 69/310 (22%), Positives = 119/310 (38%), Gaps = 62/310 (20%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF----EIAKSVRSEWVLCIDGL 76
           V ++GW+  VR      F+++ D   +  V    D +      E+ K   S  +  + G+
Sbjct: 21  VEINGWIRTVRGSKKFGFIELNDGSFLKNVQIVLDRSVIGNYDEVVKLPISSTIKIV-GI 79

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-R 135
           V+S    T +A       E+ AQ++ IL        P+  ++   E +R       LR R
Sbjct: 80  VVS----TPDAK---QAFEIQAQRV-ILEGTSNSEYPLQKKKHSYEYLR---TIAHLRPR 128

Query: 136 DTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            + + ++ +   +++    R   E +F+   TP++T+S  EGA +     RV       L
Sbjct: 129 TSTYYSVFRIRSLVSYAIHRFFQERDFVYVHTPLITSSDSEGAGEMF---RVTTLDLNNL 185

Query: 195 PQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           P+                       Q      A  F   +   P FR E+  + R   EF
Sbjct: 186 PKTETGEVDNSEDFFRRQTNLTVSGQLPAEAFALAFGNTYTFGPTFRAENSHTARHASEF 245

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGN-----------TVSNN 273
           + ++ EM+F +  D ++  E +L  V E          EF   N           T   +
Sbjct: 246 WMIEPEMAFADLTDSMDIAEALLHYVIEYVLEKAPEELEFLTQNIDQGLLTRLRETAKTS 305

Query: 274 FLRICYDDAI 283
           F R+ Y +AI
Sbjct: 306 FARVTYSEAI 315


>gi|260589025|ref|ZP_05854938.1| asparagine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540804|gb|EEX21373.1| asparagine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 463

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 105/260 (40%), Gaps = 30/260 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDG-LV 77
           V + GWV  VR      F+ + D   +   QVV +     F+    +     + + G LV
Sbjct: 21  VTVGGWVRSVRDSKTFGFIVLHDGSFFETLQVVYHDTMENFQAISKLNVGAAIVVKGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+         +I+ +   +E  S A+    P+  +R   E +R     L  R +T
Sbjct: 81  ATPQAKQ------PFEIQATEIMVEGDSAAD---YPLQKKRHSMEYLR-TISHLRPRTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPS-------RVNQG 189
                  R+ I  ++      + F+   TP++T S  EGA + F V +       +  +G
Sbjct: 131 FQAVFRVRSLIAYAIHQFFQEQGFVYVHTPLITGSDCEGAGEMFQVTTMDLNDIPKTEEG 190

Query: 190 S------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+  P       QL     A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 191 KVDFSQDFFKKPTNLTVSGQLNGETFAQAFRNIYTFGPTFRAENSNTTRHAAEFWMIEPE 250

Query: 241 MSFVEQDDILNTMENVLRGV 260
           M+F + DD +   E++L+ V
Sbjct: 251 MAFSDLDDNMALAESMLKYV 270



 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E + Q    + +++E     +G      + G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDSYEKLSQRMKEMNLNEE----DYGFYLDLRKYGSTRHSGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G +N+R+V  FP + N C+L
Sbjct: 442 LTGMQNIRDVIPFPRTVNNCEL 463


>gi|296271373|ref|YP_003654005.1| lysyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296094160|gb|ADG90112.1| lysyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 499

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 1/37 (2%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR++M   G KN+RE  LFP+
Sbjct: 459 ALEYGMPPTGGVGVGIDRMIMAFTG-KNIRETILFPL 494


>gi|188588043|ref|YP_001919588.1| asparaginyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|226695285|sp|B2UXS0|SYN_CLOBA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|188498324|gb|ACD51460.1| asparaginyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 464

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 67/311 (21%), Positives = 122/311 (39%), Gaps = 65/311 (20%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V +SGW+  +R      F++I D   +   QVV +     F EI+K   S  +  +  LV
Sbjct: 22  VMISGWIRTLRASNAFGFIEINDGSFFKNIQVVFDDKLGNFKEISKLPISSSISVVGTLV 81

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A++I I  ++     P+  +R   E +R     L  R + 
Sbjct: 82  ATPDAKQ--------PFEIQAKEIVIEGMSNS-DYPLQKKRHTFEYLR-SIAHLRPRSNA 131

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+    ++      + F+   TPI+T S  EGA +    + ++       P+A
Sbjct: 132 FSATFRVRSVAAFAIHKFFQEQGFVYTHTPIITGSDCEGAGEMFRVTTLD-------PKA 184

Query: 198 PQQYKQ--------------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGE 233
           P+  K+               L  SG          F   +   P FR E+  + R   E
Sbjct: 185 PELTKEGNIDYTKDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSNTTRHAAE 244

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSN 272
           F+ ++ E++F +  D +   E +L+ V +          +F N            + VS+
Sbjct: 245 FWMIEPEIAFADLQDDMELAEAMLKYVIKYVMDECPEELQFFNSFVDKGLLERLNHVVSS 304

Query: 273 NFLRICYDDAI 283
           +F ++ Y +A+
Sbjct: 305 DFAKVTYTEAV 315


>gi|187933881|ref|YP_001884396.1| asparaginyl-tRNA synthetase [Clostridium botulinum B str. Eklund
           17B]
 gi|226695286|sp|B2TI01|SYN_CLOBB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|187722034|gb|ACD23255.1| asparagine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 464

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 67/311 (21%), Positives = 122/311 (39%), Gaps = 65/311 (20%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V +SGW+  +R      F++I D   +   QVV +     F EI+K   S  +  +  LV
Sbjct: 22  VMISGWIRTLRASNAFGFIEINDGSFFKNIQVVFDDKLGNFKEISKLPISSSISVVGTLV 81

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A++I I  ++     P+  +R   E +R     L  R + 
Sbjct: 82  ATPDAKQ--------PFEIQAKEIVIEGMSNS-DYPLQKKRHTFEYLR-SIAHLRPRSNA 131

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+    ++      + F+   TPI+T S  EGA +    + ++       P+A
Sbjct: 132 FSATFRVRSVAAFAIHKFFQEQGFVYTHTPIITGSDCEGAGEMFRVTTLD-------PKA 184

Query: 198 PQQYKQ--------------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGE 233
           P+  K+               L  SG          F   +   P FR E+  + R   E
Sbjct: 185 PELTKEGDIDYTKDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSNTTRHAAE 244

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSN 272
           F+ ++ E++F +  D +   E +L+ V +          +F N            + VS+
Sbjct: 245 FWMIEPEIAFADLQDDMELAEAMLKYVIKYVMDECPEELQFFNSFVDKGLLERLNHVVSS 304

Query: 273 NFLRICYDDAI 283
           +F ++ Y +A+
Sbjct: 305 DFAKVTYTEAV 315


>gi|289741901|gb|ADD19698.1| mitochondrial asparaginyl-tRNA synthetase [Glossina morsitans
           morsitans]
          Length = 461

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 108/289 (37%), Gaps = 46/289 (15%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  + + GW+  VR     +F DI D   + +         F++    ++E +  +    
Sbjct: 24  GDTLEVRGWIKSVRRLKNNVFFDISDGSTMQK---------FQVVVP-KNEQLTAVSAGN 73

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--PESIRFKYRFLDLRR 135
           + R    +      G  EL A  +E ++         F  ++   PE +R    +L LR 
Sbjct: 74  LVRVLGQLQV-APQGHYELHANSLETIAEGNLNSGYPFSPKQQHDPEYVR---EYLHLRS 129

Query: 136 DTLHKNIVKRTRIINSMRCR--MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            T     + R R    M     M   +FI  +TPILT +  EGA +       +      
Sbjct: 130 RTSRTAAIMRLRHKTQMALHKFMDKHDFIHINTPILTTNDCEGAGEVFTVQPDSDELLKQ 189

Query: 194 LPQAPQQYKQLL-----------------MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           + + P    Q                   M+ G    + I+P FR E+ +S     EFY 
Sbjct: 190 MSRPPVPLSQSYFDSKVYLTVSGQLHLESMSYGLGNTYTISPAFRAENCKSPLHLSEFYM 249

Query: 237 LDMEMSFVEQ-DDILNTMENVLRGV------FEE----FSNGNTVSNNF 274
            + E+ F+E  +++   +E +++ V      F E    +    TV  NF
Sbjct: 250 FEAELVFIENLEELCRFIEKMIKSVTNDILKFSEADIQYCQNQTVGENF 298



 Score = 37.7 bits (86), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 9/51 (17%)

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +FGGL         P GG   G +R + LL G KN+R+V  FP   + C +
Sbjct: 420 KFGGL---------PTGGFGMGFERFLQLLTGVKNIRDVIPFPRYPHSCKM 461


>gi|315054251|ref|XP_003176500.1| asparaginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311338346|gb|EFQ97548.1| asparaginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 550

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 21/207 (10%)

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR------I 148
           EL A K++I+  A+    P+  +   P+ +R   +   LR  T    ++ R R      +
Sbjct: 133 ELQATKVDIVGEADPTTYPIQKKFHTPDFLR---QLPHLRLRTPFNALLSRLRSEFIYQV 189

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSR---VNQGS---FYALPQAPQQY 201
               R      NF++   P++T+S  EGA + F +  R     +G    F+  P+     
Sbjct: 190 TEEFRSHYHL-NFVQVQPPLITSSDCEGAGEVFTINPRDVVTEEGKVTEFFRSPKYLTVS 248

Query: 202 KQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT-MENVL 257
            QL +   A+     + ++P FR E   + R   EFY L++EMS+++  + L   +E +L
Sbjct: 249 SQLHLEAYAAELGNVWTLSPTFRAEKSDTPRHLSEFYMLEVEMSYIDSLEPLTAFVETLL 308

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIR 284
           R + +           F     DD  +
Sbjct: 309 RNITQRVYKSPVAQELFSLKETDDLTK 335


>gi|313678766|ref|YP_004056506.1| lysine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950672|gb|ADR25267.1| lysine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 489

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG   GIDR++MLL    ++R+V LFP
Sbjct: 446 ALEYGMPPTGGCGIGIDRLIMLLTETSSIRDVLLFP 481


>gi|148377884|ref|YP_001256760.1| lysyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291930|emb|CAL59321.1| Lysyl tRNA synthetase [Mycoplasma agalactiae PG2]
          Length = 489

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG   GIDR++MLL    ++R+V LFP
Sbjct: 446 ALEYGMPPTGGCGIGIDRLIMLLTETSSIRDVLLFP 481


>gi|257487124|ref|ZP_05641165.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 288

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 196 RFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPT 255

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 256 AGEGIGIDRLVMLLTDSPSIRDVILFP 282


>gi|251778075|ref|ZP_04820995.1| asparagine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082390|gb|EES48280.1| asparagine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 464

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 67/311 (21%), Positives = 122/311 (39%), Gaps = 65/311 (20%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V +SGW+  +R      F++I D   +   QVV +     F EI+K   S  +  +  LV
Sbjct: 22  VMISGWIRTLRASNAFGFIEINDGSFFKNIQVVFDDKLGNFKEISKLPISSSISVVGTLV 81

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A++I I  ++     P+  +R   E +R     L  R + 
Sbjct: 82  ATPDAKQ--------PFEIQAKEIVIEGMSNS-DYPLQKKRHTFEYLR-SIAHLRPRSNA 131

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+    ++      + F+   TPI+T S  EGA +    + ++       P+A
Sbjct: 132 FSATFRVRSVAAFAIHKFFQEQGFVYTHTPIITGSDCEGAGEMFRVTTLD-------PKA 184

Query: 198 PQQYKQ--------------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGE 233
           P+  K+               L  SG          F   +   P FR E+  + R   E
Sbjct: 185 PELTKEGDIDYTKDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSNTTRHAAE 244

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSN 272
           F+ ++ E++F +  D +   E +L+ V +          +F N            + VS+
Sbjct: 245 FWMIEPEIAFADLQDDMELAEAMLKYVIKYVMDECPEELQFFNSFVDKGLLERLNHVVSS 304

Query: 273 NFLRICYDDAI 283
           +F ++ Y +A+
Sbjct: 305 DFAKVTYTEAV 315


>gi|319953566|ref|YP_004164833.1| asparaginyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319422226|gb|ADV49335.1| Asparaginyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 477

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 114/277 (41%), Gaps = 33/277 (11%)

Query: 5   RTHSCGDLGVSDVG-SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA- 62
           ++HS  +L  S++    V ++GWV   R +    F+ + D   I  +    D   F+ A 
Sbjct: 2   KSHSIKELLSSNLSLQEVTINGWVKTFRSNR---FIALNDGSTINNIQCVVDFENFDEAL 58

Query: 63  -KSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREY 120
            K V +   + I G ++             GQ +E+  +++ +L V++    P+  ++  
Sbjct: 59  LKKVSTGAAVKISGTLVESQGR--------GQSVEIQVKELVVLGVSDPDTYPIQPKKHS 110

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R K   L +R +T    +  R+ +  ++        F    TPI+T S  EGA + 
Sbjct: 111 LEFLREKAH-LRVRTNTFAAVMRVRSTLSFAVHRYFQNNGFYNVHTPIITGSDAEGAGEM 169

Query: 181 LVPSRVNQGS--------------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDE 223
              S ++Q                F+          QL     A    + +   P FR E
Sbjct: 170 FRVSTLDQKKPPLNDAGEIDFKQDFFGKETNLTVSGQLEAETYAMALGKVYTFGPTFRAE 229

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +  + R   EF+ ++ E++F + D  ++  E+ ++ V
Sbjct: 230 NSNTSRHLAEFWMIEPEVAFNDLDANMDLAEDFIKDV 266


>gi|157368667|ref|YP_001476656.1| lysyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166980064|sp|A8G8T8|SYK3_SERP5 RecName: Full=Uncharacterized protein YjeA
 gi|157320431|gb|ABV39528.1| lysyl-tRNA synthetase-related protein GenX [Serratia proteamaculans
           568]
          Length = 325

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 10/95 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------VGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G      S    Q F+         G+ +  ++N    L  A Q 
Sbjct: 233 AERFEVYFKGIELANGFRELTDSREQGQRFAQDNRKRAERGLPQHPIDN---NLLDALQH 289

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           GMP   G+A G+DR+VML LGA+++ EV  FP+ +
Sbjct: 290 GMPECSGVALGVDRLVMLALGAESLSEVLAFPVDR 324


>gi|168334959|ref|ZP_02693077.1| asparaginyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 461

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 127/313 (40%), Gaps = 57/313 (18%)

Query: 16  DVGSF--VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWV 70
           D+ +F  V ++GW+  VR      F+D+ D   +   QVV +     F EIAK      +
Sbjct: 12  DISNFKEVEVAGWIRSVRDSKTFGFIDLNDGTFFKGVQVVFDDTMPNFKEIAKLGVGASI 71

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP--LPVFGEREYPESIRFKY 128
           +    +V++   +           E+ A  I   ++  E P   P+  +R   E +R + 
Sbjct: 72  IVKGSVVLTPDQKQ--------PFEIKASAI---TIEGECPPDYPLQKKRHSFEFLR-EI 119

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL------- 181
            +L  R +T       R+ +  ++       +F+   TPI+TA+  EGA +         
Sbjct: 120 AYLRPRTNTFAAVFRVRSLVAYAIHKFFQDRHFVYVHTPIITANDCEGAGEMFRVTTLSA 179

Query: 182 -VPSRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLP 231
             P  +  G       F+    +     QL     A  F   +   P FR E+  + R  
Sbjct: 180 TEPKLLKNGEVDFSEDFFGKMASLTVSGQLSAETFALAFRDVYTFGPTFRAENSNTPRHA 239

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVF--------EEFSNGNT-------------V 270
            EF+ ++ E++F + +D ++  E++L+ V         EE +  N+             +
Sbjct: 240 AEFWMIEPEIAFADLEDNMHLAEDMLKFVIQYVLDNAPEEMAFFNSFVDKGIKDRLISIL 299

Query: 271 SNNFLRICYDDAI 283
            +NF ++ Y DAI
Sbjct: 300 KSNFGQVTYTDAI 312


>gi|146283093|ref|YP_001173246.1| lysyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|145571298|gb|ABP80404.1| lysyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 426

 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 4/136 (2%)

Query: 125 RFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV 182
           R++ R++DL   + + +    R+++I  +R  +   +F+E  TP+L T      A+ F  
Sbjct: 87  RYRQRYVDLMVNEEVRETFRVRSKVIAHIRKFLAERDFLEVETPMLQTIPGGAAAKPFET 146

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  L+   +
Sbjct: 147 HHNALDMPMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMLEFYQA 204

Query: 243 FVEQDDILNTMENVLR 258
           + + +D ++  E + R
Sbjct: 205 YADYEDNMDLTEELFR 220



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 334 RFELFIGGREIANAYSELNDAEDQAERFHAQVADKDAGDDEAMHFDADFVRALEYGMPPT 393

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 394 AGEGIGIDRLVMLLTNSPSIRDVILFP 420


>gi|119963343|ref|YP_945986.1| lysyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119950202|gb|ABM09113.1| lysyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 509

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + G PP GGI  GIDR+VML  GA  +RE  LFP+
Sbjct: 467 RALEYGAPPMGGIGLGIDRLVMLFTGA-GIRETILFPL 503



 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 11/155 (7%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLPV    E  E  R + R++DL  RD   + + +R  I  S+R  +    ++E  TPIL
Sbjct: 159 PLPVL-HAELNEETRVRQRYVDLMVRDEAREMVYRRAAITRSVRDTLDRHGYVEVETPIL 217

Query: 170 T-ASSPEGARDFLVPSRVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
                   AR F      +  +F     L  A + + +  +  G DR + +   FR+E  
Sbjct: 218 QLVHGGATARPF----ETHMNAFDQKMTLRIATELFLKRAVVGGIDRVYDMGRVFRNEGV 273

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            S   P EF  L+   ++ +Q  +   M+ ++  V
Sbjct: 274 DSTHSP-EFTTLECYEAWADQFVMAERMKEIILNV 307


>gi|291320609|ref|YP_003515874.1| Lysyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752945|emb|CBH40920.1| Lysyl tRNA synthetase [Mycoplasma agalactiae]
          Length = 489

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG   GIDR++MLL    ++R+V LFP
Sbjct: 446 ALEYGMPPTGGCGIGIDRLIMLLTETSSIRDVLLFP 481


>gi|119189761|ref|XP_001245487.1| hypothetical protein CIMG_04928 [Coccidioides immitis RS]
          Length = 535

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 12/163 (7%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGA-RDFLVPSRVNQGSFYALPQAPQQYKQ 203
           R+ I+  +R   +   FIE +TPI+ A++     R F   +  +     AL  AP+ + +
Sbjct: 214 RSSIVQHIRNFFLERRFIEVNTPIIAAAAGGAIARPFHTTASESVEQLLALRIAPELWLK 273

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPG----EFYQ--LDMEMSFVEQDDILNTMENVL 257
            L+  GFDR F+I P FR+E       P     EFYQ   D+E      + +L+ +   +
Sbjct: 274 RLIVGGFDRIFEIGPSFRNEGLDKTHNPEFTTCEFYQAFADLECLMQMTETLLSGLSQNI 333

Query: 258 RGVFEEFSNGNTV----SNNFLRICYDDAIRR-YGTDKPDLRN 295
           R + E+    + +    S  F RI +  A+    G   PDL++
Sbjct: 334 RELNEKLGTLHPIYVDFSTPFRRIDFVPALESAMGHTLPDLKS 376



 Score = 38.5 bits (88), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +A + G+PP GG   GIDR+ ML  GA+ + +V  F
Sbjct: 480 QALEWGLPPTGGWGCGIDRLCMLFTGARRIGDVLSF 515


>gi|213693014|ref|YP_002323600.1| lysyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213524475|gb|ACJ53222.1| lysyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 509

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 6/161 (3%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I S A + PLP    ++  E  R +  ++ +  D   +N+V+ R++ +
Sbjct: 132 TGELSVFATEWAIASKALQ-PLPAL-HKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAV 189

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R      +F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 190 ASLRRTFDDHDFLEVETPMLQTLHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 248

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           G DR F+I   FR+E   +   P EF  ++   ++   D I
Sbjct: 249 GIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYGTYDSI 288



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 418 KWDLYVRGFELATG--YSELNDPVVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 475

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 476 PAGGMGMGIDRLLIALTGA-TIRETITFPL 504


>gi|184201564|ref|YP_001855771.1| lysyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183581794|dbj|BAG30265.1| lysyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 510

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 110/245 (44%), Gaps = 20/245 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPDSACFEIAKSVRSEWVLCID-GLVM 78
           V ++G V  VR  G + F  +++  G   QV+ +  +    +     ++W   +D G  +
Sbjct: 77  VTVAGRVVHVRNTGKLCFGTLQEGDGTRLQVMLSKAN----VGDEALAQWKALVDLGDFV 132

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
           + +   I++    G++ + A    + S A   PLP    +E  E  R + R+LDL  R  
Sbjct: 133 AVTGRVISSR--RGELSVMADSWTMASKALR-PLPTM-HKELNEETRVRQRYLDLIVRQE 188

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF---YA 193
               ++ R+ I  ++R  M  + ++E  TP+L        AR F      +  +F     
Sbjct: 189 ARDVVLTRSLITRTVRRVMEQQGYVEIETPMLQLVHGGAAARPF----ETHLNAFDQDMT 244

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  A + Y +  +  G D+ F+I   FR+E   S   P EF  L+   ++ +Q D+ + +
Sbjct: 245 LRIATELYLKRAVVGGIDKVFEIGRVFRNEGVDSSHSP-EFTTLEAYEAYADQFDMADRI 303

Query: 254 ENVLR 258
             +++
Sbjct: 304 REIIQ 308



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + G PP GG+  G+DR++ML      +RE  LFP+
Sbjct: 470 RALEHGAPPMGGMGLGLDRLIMLFTNL-GIRETILFPL 506


>gi|70927070|ref|XP_735975.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56510118|emb|CAH87400.1| hypothetical protein PC302445.00.0 [Plasmodium chabaudi chabaudi]
          Length = 267

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 3/103 (2%)

Query: 123 SIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDF 180
            IR++ R+LDL  +   +NI + RT+IIN +R  +  + FIE  TP +   +    AR F
Sbjct: 11  EIRYRQRYLDLIVNESTRNIFITRTKIINFLRSFLNDQGFIEVETPSMNLVAGGASARPF 70

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           +          Y L  A +   ++L+  G DR ++I   FR+E
Sbjct: 71  ITHHNDLDIDLY-LRIATELPLKMLIVGGLDRVYEIGKVFRNE 112


>gi|116668733|ref|YP_829666.1| lysyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116608842|gb|ABK01566.1| lysyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 510

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + G PP GGI  GIDR+VML  GA  +RE  LFP+
Sbjct: 468 RALEYGAPPMGGIGLGIDRLVMLFTGA-GIRETILFPL 504



 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 73/174 (41%), Gaps = 9/174 (5%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLPV       E  R + R++DL  RD   + +  R  I  S+R  +   N++E  TP+L
Sbjct: 159 PLPVL-HAGLNEETRVRQRYVDLMVRDEAREMVYTRAAITRSIRESLHRRNYVEVETPML 217

Query: 170 TASSPEGARDFLVPSRVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
                 GA     P   +  +F     L  A + Y +  +  G DR + +   FR+E   
Sbjct: 218 QLVHG-GA--LARPFETHMNAFDQKMTLRIATELYLKRAVVGGIDRVYDMGRVFRNEGVD 274

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
           S   P EF  L+   ++ +Q  + + ++ ++    +    G T+      I  D
Sbjct: 275 STHSP-EFTTLECYEAWADQFVMADRIKEIILDAADAAGVGRTIQTEAGEINLD 327


>gi|301091450|ref|XP_002895910.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262096098|gb|EEY54150.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 255

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD++  G E+       H  +++++    +G+ +E + N    L    +    PHGG  
Sbjct: 169 SYDMMIRGEEMVLCAQHVHDPKLLMERMDELGVPQESMRNYIYSL----RLDSLPHGGGG 224

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            G++R+VML LG  N+ + S+FP
Sbjct: 225 IGLERVVMLYLGLGNISKSSMFP 247


>gi|313114650|ref|ZP_07800156.1| asparaginyl-tRNA synthetase [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310623014|gb|EFQ06463.1| asparaginyl-tRNA synthetase [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 462

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 106/272 (38%), Gaps = 46/272 (16%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC-IDGL 76
           G+ + + GW   +R    I F            +A  D  CF+  + V     L   D +
Sbjct: 17  GTEITVCGWAKNIRDSKNIGF------------IALSDGGCFKTLQVVLEAGKLANYDEV 64

Query: 77  VMSRSAETINAN---IITGQ----IELSAQKIEILS--VAEELPLPVFGEREYPESIRFK 127
           + +    ++      ++T Q     EL+A  +EIL    A+E PL     ++   S+ + 
Sbjct: 65  IHTGLYSSLRVKGKLVLTPQAKQPFELNADSVEILGDCPADEYPL-----QKKKMSMEYL 119

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRC-RMIAEN-FIECSTPILTASSPEGARDFL---- 181
                LR  T   N   R R   +    +   EN F+   +P+LT+S  EGA +      
Sbjct: 120 RTMPTLRPRTNTFNAAFRVRSAAAYAIHKFFQENGFVYSHSPLLTSSDCEGAGEMFRVTT 179

Query: 182 -----VPSRVN-----QGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                VP   +        F+  P       Q +   MA  F + +   P FR E   + 
Sbjct: 180 LDLENVPKNEDGTVDYTQDFFEKPVNLTVSGQLEAEAMAMAFGKVYTFGPTFRAEKSFTT 239

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           R   EF+ ++ EM+F +    ++T E + + V
Sbjct: 240 RHAAEFWMIEPEMAFCDLSGYMDTAEAMTKYV 271


>gi|309800497|ref|ZP_07694650.1| lysyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308115877|gb|EFO53400.1| lysyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 269

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           L  F     +KE+ ++   G+      A + GMPP GG+  GIDR+ MLL     +R+V 
Sbjct: 204 LSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVL 263

Query: 561 LFP 563
           LFP
Sbjct: 264 LFP 266


>gi|301155597|emb|CBW15065.1| predicted lysyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 327

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 8/109 (7%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDL----VCNGF-EIASGGIRNHMSEVMLQAFSNVGI 513
           F   Q  +  L   D    + F++      + NGF E+     + H  E   +     G+
Sbjct: 217 FPSSQAALAQLSPEDSRVAERFEFYYKGLELANGFHELTDAREQQHRFEQDNRLREKAGL 276

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +  +++R   L  A Q G+P   G+A G+DR++M+ LGA++++EV  F
Sbjct: 277 PQREIDHR---LLAALQAGIPNTSGVALGVDRLIMIALGAESIKEVISF 322


>gi|284034303|ref|YP_003384234.1| lysyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283813596|gb|ADB35435.1| lysyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 506

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 1/38 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           RA + GMPP GG+  G+DR+VML  GA  +RE  LFP+
Sbjct: 466 RAMEFGMPPAGGMGMGLDRLVMLFTGA-GIRETILFPL 502



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 32/272 (11%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG--ITQVVA 52
           RTH   DL            +  G  V ++G V  +R  G + F+ +R+  G  +  +++
Sbjct: 46  RTHLLKDLRARYDGQDLAPDTRTGEQVAVAGRVIFLRNTGKLCFVRLREGDGTELQVMLS 105

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEEL- 110
             D    E+A   R + ++ I  L+      +++  ++T +  ELS Q       A+ L 
Sbjct: 106 LADVGEEELA---RFKALVDIGDLI------SVHGEVVTSRRGELSVQAAGWQMAAKTLR 156

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           PLP        E  R + R++DL      +++V+ +  ++ S+R    A  F+E  TP L
Sbjct: 157 PLP-NEHNPLSEEARVRMRYVDLIVRPEARDMVRTKAAVLKSLRATFDAHTFVEVETPTL 215

Query: 170 TASSPEGARDFLVPSRVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
             ++   A     P R +  +F     L  A +   +  M  G DR ++I   FR+E   
Sbjct: 216 QLTNGGAAAR---PFRTHLNAFDQEMLLRIALELDLKRAMIGGVDRVYEIGRTFRNEGLD 272

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           S     EF  ++   ++ + D +   +E ++R
Sbjct: 273 STH-AAEFSMIEAYQAYGDYDSMAVLIEELIR 303


>gi|85858716|ref|YP_460918.1| truncated lysyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85721807|gb|ABC76750.1| truncated lysyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 332

 Score = 47.0 bits (110), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 19/163 (11%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
           +R+TL      R  I++S+R      +++E  TPIL  A +PE   D +         F 
Sbjct: 35  KRETLRL----RAEILHSIRRFFRERDYLEVDTPILIPAPAPESHIDAVA------CGFQ 84

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG----EFYQLDMEMSFV--EQ 246
            L  +P+   + L+A+G+ R FQI  CFR+ +  +  LP     E+Y    +  F+  E 
Sbjct: 85  YLQTSPELCMKRLLAAGYPRLFQICSCFREAERGTRHLPEFTLLEWYAQGKDYMFLMEEC 144

Query: 247 DDILNTMENVLRGVFEEFSNGNTV--SNNFLRICYDDAIRRYG 287
           + +L  +   L G  E    G+ +  S  + R+  ++A  RYG
Sbjct: 145 EALLRFLAVTLYGKEEITFQGSRIDLSAPWERLSVNEAFLRYG 187


>gi|313625399|gb|EFR95176.1| lysyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 117

 Score = 47.0 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL  A ++R++ LFP
Sbjct: 76  ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFP 111


>gi|295395579|ref|ZP_06805773.1| lysine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971598|gb|EFG47479.1| lysine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 500

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 6/182 (3%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIIN 150
           G++ + A + E+ + A   PLP     E  +  R + R+LDL  R+   K +  R+ ++ 
Sbjct: 129 GELSIFASRWEMAAKAIR-PLPP-QHTELGDEGRMRQRYLDLIMREDARKTVHIRSDVMK 186

Query: 151 SMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
           S+R       F+E  TP+L T  S   AR F           Y L  AP+ + +  +  G
Sbjct: 187 SLRKTFDERGFLEIETPMLQTIPSGAAARPFSTHMNAYDMELY-LRIAPELFLKRAVVGG 245

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
            ++ F+I   FR+E   S   P EF  L+   ++ +   I    + +++   EE +    
Sbjct: 246 LEKVFEINRNFRNEGADSTHSP-EFAMLEAYEAYGDYSTIGELTKKLIQNAAEEATGSLH 304

Query: 270 VS 271
           V+
Sbjct: 305 VT 306



 Score = 44.3 bits (103), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFS----NVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++DL   GFE+A+G        V  + F     N     +           A + GMPP 
Sbjct: 408 KWDLYVRGFELATGYSELVDPVVQRERFEAQTRNAAKGDDEAMPLDEDFLTAMEFGMPPS 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GG+  GIDR++M L G   +RE  LFP+
Sbjct: 468 GGMGMGIDRLLMALTGL-GIRETILFPL 494


>gi|291616925|ref|YP_003519667.1| AsnS [Pantoea ananatis LMG 20103]
 gi|291151955|gb|ADD76539.1| AsnS [Pantoea ananatis LMG 20103]
          Length = 466

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 110/279 (39%), Gaps = 52/279 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V S V + GWV R R          RD       +A  D +CF   ++V +  +      
Sbjct: 16  VDSEVTVRGWV-RTR----------RDSKAGLSFIAVYDGSCFNPVQAVVNNSLNNYQDE 64

Query: 77  VMSRSAETINANIITGQI----------ELSAQKIEILSVAEEL-PLPVFGEREYPESIR 125
           V+  +  T  + I+TG++          E+ A K+E++   E+    P+  +R    SI 
Sbjct: 65  VLHLT--TGCSVIVTGKVVASPGQGQAFEIQATKLEVVGWVEDPDSYPMAAKRH---SIE 119

Query: 126 FKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVP 183
           +      LR  T     V R R  +     R   EN +   STP++TAS  EGA +    
Sbjct: 120 YLREVAHLRPRTNLIGAVARVRHTLAQALHRFFHENGYFWVSTPLITASDTEGAGEMF-- 177

Query: 184 SRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDE 223
            RV+      LP+  Q                    Q      AS   + +   P FR E
Sbjct: 178 -RVSTLDMENLPRNDQGKVDYSEDFFGKEAFLTVSGQLNGETYASALSKIYTFGPTFRAE 236

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           +  + R   EF+ L+ E++F   DD     E +L+ VF+
Sbjct: 237 NSNTSRHLAEFWMLEPEIAFASLDDAAALAEAMLKYVFK 275


>gi|183601998|ref|ZP_02963367.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|241190485|ref|YP_002967879.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241195891|ref|YP_002969446.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|183218883|gb|EDT89525.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|240248877|gb|ACS45817.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250445|gb|ACS47384.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|295793472|gb|ADG33007.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9]
          Length = 538

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 33/256 (12%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I + A + PLP    +E  E  R +  ++ +  D   +N+V+ R+R +
Sbjct: 167 TGELSIFADEWAIAAKALQ-PLPTL-HKELNEDTRTRKPYIGMIADEKIRNMVRNRSRAV 224

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R       F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 225 ASLRRTFDEHGFLEVETPMLQTIHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 283

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           G ++ F+I   FR+E   +   P        E + VE               +E + N +
Sbjct: 284 GIEKVFEINRDFRNEGVDATHAP--------EFTMVE--------------AYEAYGNYD 321

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           T++     +    AI  +G+ K      + + + TE+    E++  S   S++       
Sbjct: 322 TIAKLVKELIQKTAIDVFGSTK------VTLLDGTEYDFGGEWKTMSMYDSLSEALGQQI 375

Query: 329 IPAKGGGGNRAFCDRM 344
            P        A  DR+
Sbjct: 376 TPETSVEELGAIADRL 391



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 446 KWDLYVRGFELATG--YSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 503

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 504 PAGGMGMGIDRLLIALTGA-TIRETITFPL 532


>gi|23336627|ref|ZP_00121835.1| COG1190: Lysyl-tRNA synthetase (class II) [Bifidobacterium longum
           DJO10A]
          Length = 414

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 6/161 (3%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I S A + PLP    ++  E  R +  ++ +  D   +N+V+ R++ +
Sbjct: 36  TGELSVFATEWAIASKALQ-PLPAL-HKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAV 93

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R      +F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 94  ASLRRTFDDHDFLEVETPMLQTLHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 152

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           G DR F+I   FR+E   +   P EF  ++   ++   D I
Sbjct: 153 GIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYGTYDSI 192



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 322 KWDLYVRGFELATG--YSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 379

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 380 PAGGMGMGIDRLLIALTGA-TIRETITFPL 408


>gi|330830401|ref|YP_004393353.1| asparaginyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328805537|gb|AEB50736.1| Asparaginyl-tRNA synthetase, putative [Aeromonas veronii B565]
          Length = 466

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 124/321 (38%), Gaps = 65/321 (20%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VG+   + GW+   R    GI FL I             D +CF   ++V    + 
Sbjct: 12  GKYPVGTTQTVKGWIRTRRDSKAGISFLAI------------SDGSCFHPVQAVVPNTLA 59

Query: 72  CIDGLVMSRSAE-------TINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPE 122
             +  V+  +          + A+  +GQ  EL A +++++   E+    P+  +R   E
Sbjct: 60  NYENEVLRLTTACSVEVTGVVAASQGSGQAFELQATEVKVVGWVEDPDTYPMAAKRHSIE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            +R +     LR  T     V R R  +  ++      E F+  +TP++TAS  EGA + 
Sbjct: 120 YLREQAH---LRPRTNIVGAVTRVRHCLAQAIHRFFHEEGFLWVATPLITASDTEGAGEM 176

Query: 181 LVPS--------RVNQGS------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
              S        R + G       F+   A      Q      A    + +   P FR E
Sbjct: 177 FRVSTLDMENLPRTDAGKVDYNEDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFRAE 236

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT---- 269
           +  + R   EF+ ++ E++F + +D     E +L+ VF           EF   +     
Sbjct: 237 NSNTSRHLAEFWMVEPEVAFNDLEDNAALAEAMLKYVFNAVLTERRDDLEFFAQHVDKDA 296

Query: 270 -------VSNNFLRICYDDAI 283
                  VS++F +I Y DAI
Sbjct: 297 IGRLERFVSSDFAQIDYTDAI 317


>gi|271970322|ref|YP_003344518.1| lysyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
 gi|270513497|gb|ACZ91775.1| lysyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
          Length = 500

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 104/245 (42%), Gaps = 12/245 (4%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-G 75
            G  V ++G V   R  G + F  IRD     QV+ + D    ++ +   + W   +D G
Sbjct: 60  TGDRVGVTGRVMLSRTGGKLCFATIRDGSADLQVMISLD----KVGEESLAAWKRDVDLG 115

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-R 134
             +    E I +    G++ + A +  I S     PLP           R + R+LDL  
Sbjct: 116 DHVGIEGEVITSR--RGELSILADRWAITSKCLR-PLPEKHAGLTDPEARVRQRYLDLIV 172

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
            D   K    R+ ++ +MR     E ++E  TP+L        AR F           Y 
Sbjct: 173 NDEARKMAYTRSAVVRAMRDFWHGEGYLEVETPMLQPIHGGATARPFKTHINAYSMELY- 231

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  A + Y + L+  G ++ F+I   FR+E   +   P EF  L+   ++++ +D+ +  
Sbjct: 232 LRIAIELYLKRLVVGGIEKVFEINRNFRNEGADATHNP-EFTMLEAYGTYLDYNDMADLT 290

Query: 254 ENVLR 258
           + +++
Sbjct: 291 QRMIQ 295



 Score = 45.1 bits (105), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 46/179 (25%)

Query: 406 PLKFCSFAADA----------RNHIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKID 453
           PL+     ADA          +  + QE+   ++     +  ++MD+P            
Sbjct: 343 PLEHVRKHADAHEIHWDPKWGQGKLVQEIFEALVEHTLIQPTFVMDYPL----------- 391

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG--------GIRNHMSEVML 505
              +P T         + N LL+ K   +DL+  G E+ +           R  ++E  L
Sbjct: 392 -ETSPLTRQH------RDNPLLTEK---WDLIGFGTELGTAYSELVDPVEQRRRLTEQSL 441

Query: 506 QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A      + ++ E+       A +  MPP GG+  G+DR+VM   G KN+RE  LFP+
Sbjct: 442 LAAGGDPEAMQLDED----FLTALEYAMPPTGGMGLGVDRLVMAFTG-KNIRETILFPL 495


>gi|260946261|ref|XP_002617428.1| hypothetical protein CLUG_02872 [Clavispora lusitaniae ATCC 42720]
 gi|238849282|gb|EEQ38746.1| hypothetical protein CLUG_02872 [Clavispora lusitaniae ATCC 42720]
          Length = 545

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 3/130 (2%)

Query: 148 IINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
           I  ++R  +  + F+E  TPIL  + +   A  F   S+       +L  AP+ + + L+
Sbjct: 212 ITKAIRDFLHNDGFLEVQTPILAGNGTGANAEPFQTKSKAISDEKLSLRVAPELWLKKLV 271

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
             GFD+ F+I   FR+E   S   P EF   +   SF    +++   E++   +  +  N
Sbjct: 272 IGGFDKVFEIGSNFRNEGIDSTHNP-EFLTCEFYRSFTSLPELMKMTEDMFSFIHSQLLN 330

Query: 267 GNTVSNNFLR 276
             T S+ FLR
Sbjct: 331 HET-SSTFLR 339


>gi|288572810|ref|ZP_06391167.1| lysyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288568551|gb|EFC90108.1| lysyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 503

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 117/268 (43%), Gaps = 18/268 (6%)

Query: 11  DLGVSDVGSFVRLS--GWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSV 65
           D+ V +    V LS  G +  VR  G   F +++D  G  Q+    DS    C+   K  
Sbjct: 55  DISVDESREDVSLSVAGRLMTVRKQGKASFANMQDETGSMQLYFRLDSMGEECYRFFK-- 112

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             +W+   D +      E        G++ ++  +  +LS A   PLP          +R
Sbjct: 113 --KWIDAGDII----GVEGHPFRTRRGELTIAVTRCVLLSKALR-PLPEKWHGLTDTEVR 165

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVP 183
           ++ R++DL  +   +++ + R RII+S+R  +     +E  TP+L+  +    AR F+  
Sbjct: 166 YRKRYVDLMVNPEVRDVFRQRARIISSVRKTLEDHGTLEVETPMLSYLAGGANARPFVTH 225

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  A + + + L+     R +++   FR+E   +   P EF  +++   +
Sbjct: 226 HNALDLDMY-LRIATELHLKRLVVGMMGRVYEMGKNFRNEGMDAMHNP-EFTAMEVYWPY 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS 271
            +  D+++  E ++R    + +   TV+
Sbjct: 284 CDYVDMMDLTEEIVRKAALDATGSTTVT 311



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR++M L  ++++R+V LFP
Sbjct: 462 ALEQGLPPTGGLGIGIDRLIMFLTDSRSIRDVILFP 497


>gi|328906696|gb|EGG26468.1| lysine--tRNA ligase [Propionibacterium sp. P08]
          Length = 510

 Score = 47.0 bits (110), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 8/170 (4%)

Query: 95  ELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSM 152
           ELS    E    A+ L PLP    +E  E  R + R++DL  R+   + +  R  I  ++
Sbjct: 144 ELSIMAAEWRMAAKALRPLPTL-HKELSEETRVRRRYVDLVVREESRQMVRTRAAITRAV 202

Query: 153 RCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGF 210
           R  +    F+E  TPIL        AR F   + +N      +L  A + Y +  M  G 
Sbjct: 203 RRALDERGFLEIETPILQLVHGGAAARPF--NTHLNAFDLDMSLRIALELYLKRAMVGGT 260

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           DR +++   FR+E   S     EF  L+  MS+  Q  I   +++++  V
Sbjct: 261 DRVYEMGRVFRNEGIDSSH-SAEFSMLEAYMSWGNQFTIAEVIKDIIMAV 309



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 15/92 (16%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---------YRAFQCG 532
           +DL+  G E  +G      SE++        ++K+ +    G L           A + G
Sbjct: 420 WDLIIGGMERGTG-----FSELVDPVIQREVLTKQSLAAAAGDLEAMQLDEDFLEALEFG 474

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            PP GG+  G+DR+VML   A  +RE  LFP+
Sbjct: 475 CPPMGGLGLGVDRLVMLFTNA-GIRETILFPL 505


>gi|319760547|ref|YP_004124485.1| asparaginyl-tRNA synthetase [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039261|gb|ADV33811.1| asparaginyl-tRNA synthetase [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 468

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 107/272 (39%), Gaps = 38/272 (13%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           + + GW+  +R     I FLD+ D   +   Q+V        E   + +SE +    G  
Sbjct: 20  ITVHGWIRTLRHSKAKISFLDLYDGSCLKTLQIVIG------ENLHNYKSEILHLTSGCS 73

Query: 78  MSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++   + + +      IEL A  + IL  + +    P+  ++   E +R       LR  
Sbjct: 74  VTICGKIVKSIGNKQDIELVATNVTILGWIDQPNTYPITPKKHSLEYLR---NVAHLRSR 130

Query: 137 TLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS---------- 184
           T     + R R  +  SM   M  +  +   TPI+TA+  EG       S          
Sbjct: 131 THIFGAISRIRHILFQSMHNFMHKKGLLWIPTPIITAADTEGNSKMFYLSENFNNKNISN 190

Query: 185 -----RVNQGSFY----ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                +VN   F+    A      Q      A    + +   P FR E   ++R   EF+
Sbjct: 191 NISTNQVNGEQFFFGKKAFLTVSGQLNLETYACALSKVYTFGPTFRAEHSDTNRHLSEFW 250

Query: 236 QLDMEMSFVEQDDILNT----MENVLRGVFEE 263
            L++E++F + +DI+      + N+++ V E+
Sbjct: 251 MLEVEIAFSKLNDIIELAKAFLTNMIQIVLEQ 282


>gi|146308389|ref|YP_001188854.1| lysyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166229818|sp|A4XXQ6|SYK_PSEMY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|145576590|gb|ABP86122.1| lysyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 505

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 413 RFELFIGGREIANAYSELNDAEDQAERFHAQVAEKDAGDDEAMHFDADFVRALEYGMPPT 472

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 473 AGEGIGIDRLVMLLTNSPSIRDVILFP 499



 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 117/264 (44%), Gaps = 22/264 (8%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ ++D  G  QV  +      E  +++++ W L   G +++  AE   A    G + ++
Sbjct: 86  FMVLQDTSGRLQVYVDRKGLPAETLEAIKT-WDL---GDIIA--AEGTLARSGKGDLYVN 139

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCR 155
              + +L+ +   PLP           R++ R++DL    +T H   V R+++I  +R  
Sbjct: 140 MTSVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEETRHTFRV-RSQVIAHIRRF 197

Query: 156 MIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           +    F+E  TP+L T      A+ F           + L  AP+ Y + L+  GF++ F
Sbjct: 198 LNERGFLEVETPMLQTIPGGAAAKPFETHHNALDMQMF-LRIAPELYLKRLVVGGFEKVF 256

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV------FEEFSNGN 268
           +I   FR+E   +   P EF  L+   ++ +  D ++  E + R +        +   G+
Sbjct: 257 EINRNFRNEGVSTRHNP-EFTMLEFYQAYADYRDNMDLTEELFRELALAVLGTTDVPYGD 315

Query: 269 TV---SNNFLRICYDDAIRRYGTD 289
            V      F+R+   D+I +Y  D
Sbjct: 316 KVFHFGEPFVRLSVYDSILKYNPD 339


>gi|325510971|gb|ADZ22607.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 65

 Score = 46.6 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/41 (46%), Positives = 26/41 (63%)

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           F      F+ GMPPHGG+A G++RI + LL   N+RE + F
Sbjct: 16  FKSYLDVFKFGMPPHGGLAIGLERITIKLLNLDNIREAAFF 56


>gi|295096370|emb|CBK85460.1| asparaginyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 466

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 108/270 (40%), Gaps = 42/270 (15%)

Query: 21  VRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V + GWV   R    GI FL + D             +CF+  ++V +  +   +  V+ 
Sbjct: 20  VTVRGWVRTRRDSKAGISFLAVYD------------GSCFDPVQAVINNSLPNYNDDVLH 67

Query: 80  RSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFKYRFL 131
            +  T  + I+TG +  S    Q  EI + + E+   V     YP      SI +     
Sbjct: 68  LT--TGCSVIVTGVVVASPGQGQSYEIQATSVEVTGWVEDPDTYPMAAKRHSIEYLREVA 125

Query: 132 DLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            LR  T     V R R  +  ++      + +   STP++TAS  EGA +    S ++  
Sbjct: 126 HLRPRTNLIGAVARVRHTLAQALHRFFDEQGYFWVSTPLITASDTEGAGEMFRVSTLDME 185

Query: 190 SFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPG 232
           +    P+    Y +        L  SG            + +   P FR E+  + R   
Sbjct: 186 NLPRTPEGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLA 245

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           EF+ L+ E++F + +D     E +L+ VF+
Sbjct: 246 EFWMLEPEVAFADLNDAAALAEAMLKYVFK 275


>gi|117927425|ref|YP_871976.1| lysyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117647888|gb|ABK51990.1| lysyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 501

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 13/94 (13%)

Query: 479 AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           A  +DL+ NG E+A            R  ++E  ++A      + ++ E+      +A +
Sbjct: 409 AEAWDLIINGIELAPAYSELVDPVEQRRRLTEQSVRAAGGDPEAMQLDED----FLQALE 464

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            G PP GG+  G+DR++MLL G+  +R+V LFP+
Sbjct: 465 YGAPPMGGLGLGVDRLLMLLTGS-GIRDVILFPL 497



 Score = 37.7 bits (86), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 107/248 (43%), Gaps = 22/248 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-G 75
            G    ++G +   R  G + F  +RD  G  Q++ +      ++     + W   +D G
Sbjct: 63  TGQHASIAGRLMLSRIGGKLCFGVLRDGSGDLQIMLS----AQKVGDRALALWKSLVDLG 118

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +    E I +   +G++ + A      S A   PLP   +       R + R++DL  
Sbjct: 119 DHIGVHGEIITSR--SGELSILADSWSFTSKALR-PLPEKHKGLTDPEARIRRRYVDLIV 175

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF-- 191
           ++  +++V  R  ++ S+R  +    ++E  TP+L        AR F    R +  +F  
Sbjct: 176 NSRARSMVHIRAAVLRSLRDTLSRRGYLEVETPVLQLVHGGAAARPF----RTHLNAFDL 231

Query: 192 -YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  A +   + L+  G +R ++I   FR+E   S   P EF +L+   ++ + D   
Sbjct: 232 PLYLRIALELPLKRLVVGGLERVYEIGRVFRNEGVDSSHSP-EFTELEAYEAYGDYD--- 287

Query: 251 NTMENVLR 258
            TM +++R
Sbjct: 288 -TMADLVR 294


>gi|327393352|dbj|BAK10774.1| asparaginyl-tRNA synthetase AsnS [Pantoea ananatis AJ13355]
          Length = 466

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 110/279 (39%), Gaps = 52/279 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V S V + GWV R R          RD       +A  D +CF   ++V +  +      
Sbjct: 16  VDSEVTVRGWV-RTR----------RDSKAGLSFIAVYDGSCFNPVQAVVNNSLNNYQDE 64

Query: 77  VMSRSAETINANIITGQI----------ELSAQKIEILSVAEEL-PLPVFGEREYPESIR 125
           V+  +  T  + I+TG++          E+ A K+E++   E+    P+  +R    SI 
Sbjct: 65  VLHLT--TGCSVIVTGKVVASPGQGQAFEIQATKLEVVGWVEDPDSYPMAAKRH---SIE 119

Query: 126 FKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVP 183
           +      LR  T     V R R  +     R   EN +   STP++TAS  EGA +    
Sbjct: 120 YLREVAHLRPRTNLIGAVARVRHTLAQALHRFFHENGYFWVSTPLITASDTEGAGEMF-- 177

Query: 184 SRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDE 223
            RV+      LP+  Q                    Q      AS   + +   P FR E
Sbjct: 178 -RVSTLDMENLPRNDQGKVDYSEDFFGKEAFLTVSGQLNGETYASALSKIYTFGPTFRAE 236

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           +  + R   EF+ L+ E++F   DD     E +L+ VF+
Sbjct: 237 NSNTSRHLAEFWMLEPEIAFASLDDAAALAEAMLKYVFK 275


>gi|228933514|ref|ZP_04096366.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228826148|gb|EEM71929.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 65

 Score = 46.6 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%)

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           ++L +F   G+  +    +F      F+ G PPHGG   G++RI+  LL   NVRE S F
Sbjct: 1   MLLASFKEKGLHPD----KFQSYLNTFRYGCPPHGGFGIGLERILYKLLELSNVREASAF 56

Query: 563 P 563
           P
Sbjct: 57  P 57


>gi|219849235|ref|YP_002463668.1| lysyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219543494|gb|ACL25232.1| lysyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 496

 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VM+L    ++REV LFP
Sbjct: 451 ALRYGMPPTGGLGIGIDRLVMVLTDQASIREVILFP 486



 Score = 40.8 bits (94), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 113/271 (41%), Gaps = 20/271 (7%)

Query: 31  RPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANII 90
           R  G I F  I D  G  Q+  +      E  +  R +    ID   + ++  T+     
Sbjct: 66  RVMGKIAFAHIEDGTGEIQLWLSRADLGDEWFERFRDQ----IDTFDIVQATGTLR-RTK 120

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG+  L  +++ +L+ A   P   +   +  E  R + R+LDL  +   ++I + R +++
Sbjct: 121 TGERSLFVREMAVLAKAINPPPEKWAGLQDVEE-RHRQRYLDLIVNRERRDIFRARAQVM 179

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           ++MR  +    F+E  TP+L        AR F+        + Y L  A + Y + L+  
Sbjct: 180 STMRRVLDDRGFLEVETPVLQPIYGGAAARPFVTYHNALGQNLY-LRIATELYLKRLIVG 238

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GF   ++I   FR+E       P EF  ++   ++ +   ++  +E +L  +        
Sbjct: 239 GFPGVYEIGKNFRNEGVDRSHNP-EFTMMECYQAYADYHAMMTLVEEMLGEICLAVHGTT 297

Query: 269 TVSNN---------FLRICYDDAI-RRYGTD 289
           T+S           + RI   DAI  R G D
Sbjct: 298 TISYQGRELDLRPPWPRIAMADAIVERTGID 328


>gi|327481445|gb|AEA84755.1| lysyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 500

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G EIA+     + +E   + F      K+  ++          RA + GMPP 
Sbjct: 408 RFELFIGGREIANAYSELNDAEDQAERFHAQVADKDAGDDEAMHFDADFVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++R+V LFP
Sbjct: 468 AGEGIGIDRLVMLLTNSPSIRDVILFP 494



 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 4/136 (2%)

Query: 125 RFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV 182
           R++ R++DL   + + +    R+++I  +R  +   +F+E  TP+L T      A+ F  
Sbjct: 161 RYRQRYVDLMVNEEVRETFRVRSKVIAHIRKFLAERDFLEVETPMLQTIPGGAAAKPFET 220

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  L+   +
Sbjct: 221 HHNALDMPMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMLEFYQA 278

Query: 243 FVEQDDILNTMENVLR 258
           + + +D ++  E + R
Sbjct: 279 YADYEDNMDLTEELFR 294


>gi|328869079|gb|EGG17457.1| leucyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 587

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 70/135 (51%), Gaps = 8/135 (5%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD--LRRDTLHKNIVKRTRII 149
           G++ +  ++I +L+   + P+P+   R   +  R++ R LD  +    +    + R+R+I
Sbjct: 206 GELSIIPKEITLLTPCLK-PIPL---RLINKDTRYRKRHLDFLVNGHKIRDAFIVRSRMI 261

Query: 150 NSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           + +R  ++   F+E  TP+L+ +     A+ F   S       + L  +P+ Y + L+ S
Sbjct: 262 SFLRNYLVERGFLEVDTPVLSTNVGGAMAKPFRTHSNALDLDLF-LRISPELYLKQLVIS 320

Query: 209 GFDRYFQIAPCFRDE 223
           GFDR F+I   FR+E
Sbjct: 321 GFDRVFEIGKQFRNE 335



 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 24/40 (60%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   A   G+PP GG   GIDR+VMLL    ++R+V  FP
Sbjct: 536 GYCNALDYGLPPTGGWGLGIDRLVMLLTNNVSIRDVIFFP 575


>gi|219682909|ref|YP_002469292.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|219620559|gb|ACL28716.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
          Length = 554

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 33/256 (12%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I + A + PLP    +E  E  R +  ++ +  D   +N+V+ R+R +
Sbjct: 183 TGELSIFADEWAIAAKALQ-PLPTL-HKELNEDTRTRKPYIGMIADEKIRNMVRNRSRAV 240

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R       F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 241 ASLRRTFDEHGFLEVETPMLQTIHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 299

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           G ++ F+I   FR+E   +   P        E + VE               +E + N +
Sbjct: 300 GIEKVFEINRDFRNEGVDATHAP--------EFTMVE--------------AYEAYGNYD 337

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           T++     +    AI  +G+ K      + + + TE+    E++  S   S++       
Sbjct: 338 TIAKLVKELIQKTAIDVFGSTK------VTLLDGTEYDFGGEWKTMSMYDSLSEALGQQI 391

Query: 329 IPAKGGGGNRAFCDRM 344
            P        A  DR+
Sbjct: 392 TPETSVEELGAIADRL 407



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 462 KWDLYVRGFELATG--YSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 519

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 520 PAGGMGMGIDRLLIALTGA-TIRETITFPL 548


>gi|148979117|ref|ZP_01815325.1| asparaginyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145961983|gb|EDK27272.1| asparaginyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 466

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 107/275 (38%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V         +
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYEN 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A   +++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKIVESPAKGQDFELAATDFKVVGWVEDAETYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     +    Y +        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMENLPRTEKGDVDYNEDFFGKETFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + +DI    E++L+ VF+
Sbjct: 241 SRHLAEFWMVEPEVAFADLEDIAKLSEDMLKFVFK 275


>gi|27904819|ref|NP_777945.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29839434|sp|P59517|SYN_BUCBP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|27904217|gb|AAO27050.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 466

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 68/310 (21%), Positives = 128/310 (41%), Gaps = 46/310 (14%)

Query: 5   RTHSCGDLGVSDV--GSFVRLSGWV-HRVRPHGGIIFLDIRD-------HYGITQVVANP 54
           +T S  D+ ++ +   S + + GWV +R R   G++F+D+ D          +  +++N 
Sbjct: 2   KTVSIFDIYLNKIKLNSKINIQGWVRNRRRSKLGLLFIDLYDGSCLYTMQVVVKDILSNY 61

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PL 112
           DS   EI+K +     + + G+++S        +I T Q  E+ A+ ++++ +       
Sbjct: 62  DS---EISK-LSVGCSINVFGVLIS--------SIGTKQKYEIQAKVVKVIGIINNPGSY 109

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILT 170
           P+  +    + +R       LR  T     V R R  + N++   +    +    +PI+T
Sbjct: 110 PISSKYHTMKHLR---NVPHLRSRTNFFGAVSRVRNYLFNALHEFLFKNGYYWIPSPIIT 166

Query: 171 ASSPEGARDFL---------VPSRVN-----QGSFY---ALPQAPQQYKQLLMASGFDRY 213
             + EGA D           +P   N     +  F+   A      Q      A    + 
Sbjct: 167 GLNSEGAGDMFKVSILDLNNIPKNKNGKINFKKDFFGKEAFLTVSGQLTLETYACSLSKV 226

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +   P FR E+  + R   EF+ L++E +F    DI+   EN+L+       +   +  N
Sbjct: 227 YSFGPIFRAENSNTRRHLSEFWMLEVETAFSNLCDIIKFSENMLKYAIGIILDKCVIDIN 286

Query: 274 FLRICYDDAI 283
           F R   D+ I
Sbjct: 287 FFRENVDEKI 296



 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 6/83 (7%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF-QCGMPPHGGIAAGIDRIVM 548
           EI  G  R     V+ + F  + ++KE         YR   + G  PH G   G +R++ 
Sbjct: 389 EIIGGSEREERLNVLDRRFFELNLNKEDY-----WWYRDLRKYGTIPHSGFGLGFERLLS 443

Query: 549 LLLGAKNVREVSLFPMSQNFCDL 571
            +LG KN+R+V  FP +    D 
Sbjct: 444 YILGIKNIRDVCPFPRTAYKADF 466


>gi|117619714|ref|YP_856024.1| asparaginyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|166231656|sp|A0KIC3|SYN_AERHH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|117561121|gb|ABK38069.1| asparaginyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 466

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 60/278 (21%), Positives = 110/278 (39%), Gaps = 44/278 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRD-------HYGITQVVANPDSACFEIAKS 64
           G   VG+   + GW+   R    GI FL I D          +   +AN ++    +  +
Sbjct: 12  GKYAVGTTQTVKGWIRTRRDSKAGISFLAISDGSCFHPVQAVVPNTLANYENEVLRLTTA 71

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPE 122
              E    + G+V +           +GQ  EL A +++++   E+    P+  +R   E
Sbjct: 72  CSVE----VTGVVAASQG--------SGQAFELQATEVKVVGWVEDPDTYPMAAKRHSIE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            +R +     LR  T     V R R  +  ++      + ++  + P++TAS  EGA + 
Sbjct: 120 YLREQGH---LRARTNMVGAVTRVRNCLSQAIHRFFHEQGYLWIAAPLITASDTEGAGEM 176

Query: 181 LVPSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDE 223
              S ++  +    P     Y +        L  SG            + +   P FR E
Sbjct: 177 FRVSTLDMENLPRTPAGKVDYDKDFFGKETFLTVSGQLNVETYACALSKVYTFGPTFRAE 236

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           +  + R   EF+ ++ E++F + +D     E +L+ VF
Sbjct: 237 NSNTSRHLAEFWMVEPEVAFADLEDNAALAEAMLKYVF 274


>gi|289178212|gb|ADC85458.1| Lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 605

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 33/256 (12%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I + A + PLP    +E  E  R +  ++ +  D   +N+V+ R+R +
Sbjct: 234 TGELSIFADEWAIAAKALQ-PLPTL-HKELNEDTRTRKPYIGMIADEKIRNMVRNRSRAV 291

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R       F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 292 ASLRRTFDEHGFLEVETPMLQTIHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 350

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           G ++ F+I   FR+E   +   P        E + VE               +E + N +
Sbjct: 351 GIEKVFEINRDFRNEGVDATHAP--------EFTMVE--------------AYEAYGNYD 388

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           T++     +    AI  +G+ K      + + + TE+    E++  S   S++       
Sbjct: 389 TIAKLVKELIQKTAIDVFGSTK------VTLLDGTEYDFGGEWKTMSMYDSLSEALGQQI 442

Query: 329 IPAKGGGGNRAFCDRM 344
            P        A  DR+
Sbjct: 443 TPETSVEELGAIADRL 458



 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 513 KWDLYVRGFELATG--YSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 570

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 571 PAGGMGMGIDRLLIALTGA-TIRETITFPL 599


>gi|159478809|ref|XP_001697493.1| lysyl-trna synthetase, LysRS [Chlamydomonas reinhardtii]
 gi|158274372|gb|EDP00155.1| lysyl-trna synthetase, LysRS [Chlamydomonas reinhardtii]
          Length = 591

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 53/255 (20%), Positives = 113/255 (44%), Gaps = 11/255 (4%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G ++  R  G  ++F D++      Q++A+  ++  + A+        C  G ++ 
Sbjct: 133 VSVAGRIYSKRSSGSKLVFYDLKGDGSKIQIMADARNSDLD-AEGYAQVHNECKRGDIVG 191

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFKYRFLDLRRDTL 138
              E        G++ +  +K  +LS    +P    FG ++  +  R++ R+LDL  ++ 
Sbjct: 192 --VEGFPGKSKKGELSIFPKKFAVLSPCLHMPPSAHFGLKD--QETRYRQRYLDLIANSD 247

Query: 139 HKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
            ++I   R +II  +R  +    F+E  TP++        AR F+          Y +  
Sbjct: 248 VRSIFFTRAKIIQFVRRFLDTRGFLEVETPMMNMIPGGAAARPFVTHHNDLNMQLY-MRI 306

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + + L+  G +R ++I   FR+E       P EF   +   ++ +  D+L+  E +
Sbjct: 307 APELFLKQLVIGGLERVYEIGRQFRNEGIDLTHNP-EFTTCEFYQAYADYKDLLDLTEQM 365

Query: 257 LRGVFEEFSNGNTVS 271
           +  +  E      ++
Sbjct: 366 ISQMVYEIKGSYKIA 380



 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   G+DR+ MLL    N++EV LFP
Sbjct: 542 ALEYGLPPTGGWGLGVDRMTMLLTDTNNIKEVLLFP 577


>gi|148976860|ref|ZP_01813515.1| lysyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145963734|gb|EDK28994.1| lysyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 323

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 12/116 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------V 511
           F   Q  +  +  ND     A ++++   G E+A+G       +  L+ F +       +
Sbjct: 213 FPASQAALAKINPND--PRVADRFEVYFKGIELANGFHELDKPQEQLKRFEDDNAKRNEM 270

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+S + +++    L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP  ++
Sbjct: 271 GLSPQPIDHH---LIEALKAGLPDCAGVALGIDRLIMLALGYDHIDDVTAFPFPRS 323


>gi|156974183|ref|YP_001445090.1| asparaginyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156525777|gb|ABU70863.1| hypothetical protein VIBHAR_01897 [Vibrio harveyi ATCC BAA-1116]
          Length = 472

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 109/275 (39%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D             +CF+  ++V    +   D 
Sbjct: 22  VDSEVTVRGWLRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYDN 69

Query: 76  LVMSRSAE-------TINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
            V+  +          I A+   GQ  EL+A  ++++   E+    P+   R    SI +
Sbjct: 70  EVLKLTTGCSVEVTGKIVASPAKGQDFELAATNVKVVGWVEDADTYPMAKTRH---SIEY 126

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 127 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 186

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     +    Y +        L  SG            + +   P FR E+  +
Sbjct: 187 TLDMENLPRTEEGKVDYNEDFFGKETFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNT 246

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + +DI    E++L+ VF+
Sbjct: 247 SRHLAEFWMVEPEVAFADLNDIAKLSEDMLKYVFK 281


>gi|313611206|gb|EFR86012.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 106

 Score = 46.6 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR+VMLL  A ++R++ LFP
Sbjct: 65  ALEYGLPPTGGLGIGVDRLVMLLTNAPSIRDILLFP 100


>gi|256828075|ref|YP_003156803.1| asparaginyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256577251|gb|ACU88387.1| asparaginyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 460

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 68/314 (21%), Positives = 118/314 (37%), Gaps = 55/314 (17%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69
           L  ++V S V + GWV   R     +FL+I D   +   Q + +  +  FE    + +  
Sbjct: 11  LSEAEVESLV-VQGWVRTKRESKEFVFLEINDGSCLKNLQAIVDAGAVGFEHMDRIGTGA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            + + G ++    +        GQ  EL A+++++L  A+    P+  +R   E +R   
Sbjct: 70  AVSLTGTLVESPGQ--------GQKWELKARELKVLGEADA-TYPLQKKRHTDEYLR--- 117

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGARDFL----- 181
               LR  T     + R R   S         + F     PI+T S  EGA +       
Sbjct: 118 TIAHLRPRTNKFGALNRIRAELSYGVHQFFREQGFFNVHAPIITGSDCEGAGEMFQVTTL 177

Query: 182 ----VPSRVNQGSF-------YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
               VP +  +  F        A      Q     +A    R +   P FR E+  + + 
Sbjct: 178 DLSNVPKKNGKADFDQDFFGKEASLTVSGQLAAENLACALGRVYTFGPTFRAENSNTPKH 237

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVL-----------RGVFEEFSN----------GNT 269
             EF+ ++ EM+F    D ++  E+ +           R   E F N           N 
Sbjct: 238 AAEFWMIEPEMAFAGLSDNMDLGESCIKWLITHLMDHCRDDLELFGNFVDKGLFATLDNI 297

Query: 270 VSNNFLRICYDDAI 283
           ++  F+R+ Y +A+
Sbjct: 298 LAKPFIRLPYAEAV 311



 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 14/81 (17%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKE-----VVENRFGGLYRAFQCGMPPHGGIAAGID 544
           E+  G  R    +V+ +    +G+ KE     +   RFG +         PH G   G +
Sbjct: 383 ELIGGSAREERLDVLERRIEELGLPKEDYWWYLDLRRFGSV---------PHAGFGMGFE 433

Query: 545 RIVMLLLGAKNVREVSLFPMS 565
           R++ML+ G  N+R+V  FP +
Sbjct: 434 RLLMLVTGIANIRDVIPFPRT 454


>gi|163785086|ref|ZP_02179800.1| lysyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879644|gb|EDP73434.1| lysyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 238

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 62/152 (40%), Gaps = 16/152 (10%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEK-----KIDFAHNPFTMPQGGMESLKGNDLL 475
           A+E+GI   +      I+D  F  + EE+       IDF   P  +           DL+
Sbjct: 88  AKEVGIQKADELTHSKILDKLFEHFIEEDLIQPTFVIDF---PKILSPLAKTHRNDPDLV 144

Query: 476 SIKAFQYDLVCNGFEIASGGIR----NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
                +++L+ N  EIA+            E  LQ         +           A + 
Sbjct: 145 E----RFELIVNKKEIANAYTELNDPEDQKERFLQQLKEKAQGDDEAMEIDENFLMALEY 200

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP  G   GIDR+VM+L+   ++REV LFP
Sbjct: 201 GLPPTAGEGIGIDRLVMMLVDTPSIREVILFP 232


>gi|256420050|ref|YP_003120703.1| asparaginyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256034958|gb|ACU58502.1| asparaginyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 479

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 104/260 (40%), Gaps = 29/260 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + GW+   R +  I   D   +  I QVV + +S   E+ K + +   + + G V+  
Sbjct: 20  VVVKGWIRSFRNNQFIALNDGSTNNNI-QVVIDQESVTPELLKRLTTGAAISVSGQVIPS 78

Query: 81  SAETINANIITGQ-IELSAQKIEILSVAEELPLPV-FGEREYPESIRFKYRFLDLRRDTL 138
             +        GQ +E+ A ++EIL   +    P+    R   E +R +   L  R +T 
Sbjct: 79  MGK--------GQRVEIKAIELEILGDCDPEKYPLQLKNRPSLEYLR-EIAHLRFRTNTF 129

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR--------DFLVPSRVNQGS 190
                 R  +  ++      + F+   TPI+TAS  EGA         D   P     G 
Sbjct: 130 GAIFRLRHALAFAVHKFFNEKGFVYLHTPIITASDAEGAGEMFHVTSFDLKNPPLTESGE 189

Query: 191 ------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 F+          QL   L A  F   +   P FR E+  + R   EF+ ++ EM
Sbjct: 190 INYKEDFFGRATNLTVSGQLEGELGAMAFGDIYTFGPTFRAENSNTARHLAEFWMIEPEM 249

Query: 242 SFVEQDDILNTMENVLRGVF 261
           +F + ++ +N  E  ++ V 
Sbjct: 250 AFYDLEENMNLAEAFIKYVL 269


>gi|289615277|emb|CBI58044.1| unnamed protein product [Sordaria macrospora]
          Length = 588

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 20/193 (10%)

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVK-RTRIINSM 152
           E+    ++IL  ++    P+  + + PE +R       LR R  ++  ++K R+  + ++
Sbjct: 183 EMQVTHVDILGPSDAKTFPIQKKYQTPEYLR---TIPHLRPRTPINAALLKMRSEAVAAL 239

Query: 153 RCRMIAENFIECSTPILTASSPEGARD-FLVPSRVNQGSFYALPQAPQQY---KQLL--- 205
                  +F +   PILT+S  EGA + F V    N           + +   K+ L   
Sbjct: 240 TRFFADHDFTQTHPPILTSSDCEGAGEVFTVAPASNIAELTDEDNKSKMFFRNKKYLTVS 299

Query: 206 -------MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVL 257
                  +A      + ++P FR E   + R   EFY L+ EMSFV + D++++  E+++
Sbjct: 300 TQLHLEALAQSVGNVWTLSPVFRAEKSDTARHLSEFYMLEAEMSFVNDLDEVMDLAEDMI 359

Query: 258 RGVFEEFSNGNTV 270
           R +       +TV
Sbjct: 360 RNMCITMYESHTV 372



 Score = 40.4 bits (93), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 14/101 (13%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGI-SKEVVENRFG----GLYRA---------F 529
           LV +  EIA G +R H  E +L+A     I + E   +  G    G  +A          
Sbjct: 487 LVPDLCEIAGGSMREHRLEPLLEAMKRHNIVAGEFTSSMDGDAPTGGAKAGPLDWYVDLR 546

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           + G  PHGG   G DR++  L G + +R++  FP     CD
Sbjct: 547 RWGCAPHGGFGIGFDRLLCYLTGVQTIRDMVSFPRWVGRCD 587


>gi|262279901|ref|ZP_06057686.1| lysyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262260252|gb|EEY78985.1| lysyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 509

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RD 179
            ++++ R+LDL   +   K    R +++  +R  +  E F+E  TP++    P GA  R 
Sbjct: 166 EVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLNNERFMEVETPMMHVI-PGGASARP 224

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++ 
Sbjct: 225 FETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMIEF 282

Query: 240 EMSFVEQDDILNTMENVL 257
             ++ +  D++   EN++
Sbjct: 283 YQAYADYKDLMALTENMI 300



 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   A ++R+V LFP
Sbjct: 467 ALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFP 502


>gi|8928399|sp|Q9ZIY0|SYK3_HAEGA RecName: Full=Uncharacterized protein YjeA
 gi|4101633|gb|AAD01242.1| lysyl-tRNA synthetase homolog [Avibacterium paragallinarum]
          Length = 322

 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 108/261 (41%), Gaps = 27/261 (10%)

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRM-NEWARSQGQPGLAYIFWR---LDESGNVAGMG 373
           LS +P Y +  + + G G     C    NE A  +  P    + W     D    +  + 
Sbjct: 72  LSTSPEYPMKRLLSAGSGAIFQLCKVFRNEEAGKKHSPEFTMLEWYRPYFDMYRLINEVD 131

Query: 374 PVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
            + ++ L+    E++  +   Q+     ++  DPL   S + D     A+E  + N    
Sbjct: 132 DLLQYILDCEPAESMSYQFAFQE-----YVGIDPL---SASQDKLIEKAKEYCLENAERE 183

Query: 433 EFCWIMDFPFYEWNE----EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL---- 484
           +   ++ F F    E    ++K +   H P T  Q  +  +   D    + F++      
Sbjct: 184 DRDTLLQFLFNVAVESQIGKDKPVAIYHFPAT--QAALAQISSEDHRVAERFEFYYKGLE 241

Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           + NGF E+     + H  E   +    +G+    ++ RF     A + G+P   G+A G+
Sbjct: 242 LANGFCELTDANEQRHRFEQDNKQRERLGLPIHQIDERFLA---ALKAGVPNCSGVALGV 298

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           DR++M+ LG +N+ EV  F +
Sbjct: 299 DRLIMIALGLENINEVIAFSI 319


>gi|330504611|ref|YP_004381480.1| lysyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328918897|gb|AEB59728.1| lysyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 500

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 458 RALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFP 494



 Score = 45.1 bits (105), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 117/264 (44%), Gaps = 22/264 (8%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ ++D  G  QV  +      E  +++++ W L   G +++  AE   A    G + + 
Sbjct: 81  FMVLQDTSGRLQVYVDRKGLPAETLEAIKT-WDL---GDIIA--AEGTLARSGKGDLYVH 134

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCR 155
              + +L+ +   PLP           R++ R++DL    +T H   V R+++I  +R  
Sbjct: 135 MTNVRLLTKSLR-PLPDKHHGLTDTEQRYRQRYVDLIVNEETRHTFRV-RSQVIAHIRRF 192

Query: 156 MIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           +    F+E  TP+L T      A+ F         + + L  AP+ Y + L+  GF++ F
Sbjct: 193 LNDRGFLEVETPMLQTIPGGAAAKPFETHHNALDMAMF-LRIAPELYLKRLVVGGFEKVF 251

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV------FEEFSNGN 268
           +I   FR+E   +   P EF  L+   ++ +  D ++  E + R +        +   G+
Sbjct: 252 EINRNFRNEGVSTRHNP-EFTMLEFYQAYADYRDNMDLTEELFRELALAVLGTTDVPYGD 310

Query: 269 TV---SNNFLRICYDDAIRRYGTD 289
            V      F+R+   D+I +Y  D
Sbjct: 311 KVFHFGEPFVRLSVYDSILKYNPD 334


>gi|293364012|ref|ZP_06610748.1| lysine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552502|gb|EFF41276.1| lysine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 492

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG   GIDR++MLL   +++R+V LFP
Sbjct: 449 ALEYGMPPAGGCGIGIDRLIMLLSEKESIRDVLLFP 484



 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 21/208 (10%)

Query: 38  FLDIRDHYGITQVVANP--DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           F+ I+D++G  QV  N   +    +I ++     ++ + G  M            T ++ 
Sbjct: 76  FILIKDYHGKIQVYFNKKENENLAKIVETFDLGDIISVQGFAMKTH---------TNEVS 126

Query: 96  LSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMR 153
           + +  IE+L+ A + LP    G  +  E  R++ R++DL  +   KN    RT++I+ +R
Sbjct: 127 IRSVNIELLTKALKPLPDKYHGLSDVEE--RYRRRYVDLIVNEETKNTFWTRTKVISEIR 184

Query: 154 CRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
               +  ++E  TP L    S   A+ F          F  L  A +   + L+  G DR
Sbjct: 185 RYFDSLEYMEVETPFLHDYISGAAAKPFKTHHNALDQEF-VLRIATEIPLKKLLVGGIDR 243

Query: 213 YFQIAPCFRDEDPRSDRLPG----EFYQ 236
            ++I   FR+E   +   P     EFY+
Sbjct: 244 VYEIGRIFRNEGIDTTHNPEFTSIEFYE 271


>gi|238005676|gb|ACR33873.1| unknown [Zea mays]
          Length = 109

 Score = 46.6 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ MLL  ++N++EV LFP
Sbjct: 68  ALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFP 103


>gi|223040265|ref|ZP_03610543.1| lysyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878518|gb|EEF13621.1| lysyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 502

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 59/280 (21%), Positives = 113/280 (40%), Gaps = 17/280 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V L+G V  +R  G  IF +I D  G  Q+  +  +   +  K V+    + +  ++
Sbjct: 56  GQLVSLAGRVKLIRDAGKAIFANIEDEDGNLQIYFSNKTLDPDWFKVVKKN--IEVGDII 113

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
             R    +     TG+  +   ++ + S A   PLP           R++ R+LD+  + 
Sbjct: 114 YVRGYAFVTR---TGEFSMHVSELTLASKAVS-PLPEKFHGLTDIETRYRQRYLDMIMNP 169

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +  +  +R+ I++++R     + F+E  TP++            V      G    L  
Sbjct: 170 EVRADFKRRSVIVSTIRRFFEDKGFLEVETPMMHPIPGGANAKPFVTFHNALGVERFLRI 229

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GFD  +++   FR+E       P EF  ++   ++    D++   E +
Sbjct: 230 APELYLKRLIVGGFDAVYEMNRNFRNEGMDLTHNP-EFTSIEFYWAWHTYHDLMGLTEEL 288

Query: 257 LRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
              + ++      +         S  F RI Y  A+   G
Sbjct: 289 FNVLLDKLDMPKVIEFDGMQIDFSKPFKRITYKKALVEIG 328



 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA    MPP  G   GIDR+VMLL   K++R+V LFP
Sbjct: 453 RALGYAMPPTAGQGIGIDRLVMLLTNKKSIRDVVLFP 489


>gi|86608981|ref|YP_477743.1| lysyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557523|gb|ABD02480.1| lysyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 511

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G+PP GG+  GIDR+VMLL  A ++R+V  FP+
Sbjct: 463 ALEYGLPPTGGLGVGIDRLVMLLCDAPSIRDVIAFPL 499



 Score = 44.3 bits (103), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 12/242 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F  ++D  G  Q+  +      ++ +         ID +    
Sbjct: 62  VAVAGRIRARRVMGKLAFFTLQDRSGTIQLYLDKKRLTEQMGELAFKNLDKLID-VGDWL 120

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPV--FGEREYPESIRFKYRFLDL-RRDT 137
            A+        G++ +   + ++L+ A  LPLP    G R+  +  R++ R++DL     
Sbjct: 121 GAKGCLKRTEKGELSVRVDEYQVLTKAL-LPLPDKWHGLRDVEK--RYRQRYVDLIVNPE 177

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALP 195
           + + ++ R +II S+R  +    F+E  TP+L    P G  AR F+          Y L 
Sbjct: 178 VKQTLLDRAQIIRSLRQTLEERGFVEIETPVLQV-IPGGAEARPFVTHHNALDLDLY-LR 235

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + + + L+  G +R ++I   FR+E   +   P EF  L+   +F +   ++   E 
Sbjct: 236 IATELHLKRLVVGGIERVYEIGRVFRNEGISTRHNP-EFTSLEAYQAFADYHTMMELTET 294

Query: 256 VL 257
           ++
Sbjct: 295 LV 296


>gi|302661817|ref|XP_003022571.1| hypothetical protein TRV_03310 [Trichophyton verrucosum HKI 0517]
 gi|291186524|gb|EFE41953.1| hypothetical protein TRV_03310 [Trichophyton verrucosum HKI 0517]
          Length = 549

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 27/213 (12%)

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMR 153
           EL A K++I  V E  P      + YP  I+ K+   D  R   H  +      +++ +R
Sbjct: 126 ELQATKVDI--VGEADPAASSSTQTYP--IQKKFHTPDFLRQLPHLRLRTPFNALLSRLR 181

Query: 154 CRMIAE-----------NFIECSTPILTASSPEGARD-FLVPSR---VNQGS---FYALP 195
              I +           NF++   P++T+S  EGA + F +  R   + +G    F+  P
Sbjct: 182 SEFIYQVTEEFRSHRHLNFVQVQPPLITSSDCEGAGEVFSIRPRDVVIEEGKAVEFFKSP 241

Query: 196 QAPQQYKQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           +      QL +   A+     + ++P FR E   + R   EFY L+ EMS+++  + L  
Sbjct: 242 KYLTVSSQLHLEAYAAELGNVWTLSPTFRAEKSDTPRHLSEFYMLEAEMSYMDSLEPLTA 301

Query: 253 -MENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            +E +LR + +           F     DD  +
Sbjct: 302 FVETLLRNMTQRVYKSPVAQELFSFKATDDLTK 334


>gi|10798642|emb|CAC12821.1| lysyl-tRNA synthetase [Nicotiana tabacum]
          Length = 169

 Score = 46.6 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ MLL  ++N++EV LFP
Sbjct: 84  ALEYGLPPTGGWGLGIDRLAMLLTDSQNIKEVLLFP 119


>gi|258627615|ref|ZP_05722392.1| asparaginyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258580197|gb|EEW05169.1| asparaginyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 477

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 120/317 (37%), Gaps = 65/317 (20%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL I D             +CF   ++V    +   D 
Sbjct: 27  VDSEVTVRGWVRTRRDSKAGISFLAIYD------------GSCFNPIQAVVPNNLNNYDN 74

Query: 76  LVMSRSAE-------TINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
            V+  +         TI  +  +GQ  EL+A  ++++   E+    P+   R    SI +
Sbjct: 75  EVLKLTTGCSVEVTGTIVESPASGQAFELAATAVKVVGWVEDADTYPMAKTRH---SIEY 131

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 132 LREVAHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 191

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y Q        L  SG            + +   P FR E+  +
Sbjct: 192 TLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNT 251

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT-------- 269
            R   EF+ ++ E++F + + +    E++L+ VF+          EF N           
Sbjct: 252 SRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARL 311

Query: 270 ---VSNNFLRICYDDAI 283
              V ++F ++ Y DAI
Sbjct: 312 EKFVDSDFAQVDYTDAI 328


>gi|297689832|ref|XP_002822341.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           [Pongo abelii]
          Length = 333

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 17/168 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANP--DSACFEIAKSVRSEWVLCI 73
           G  +++ GW+  VR    ++FL + D   +   QVVA+   DS       SV       +
Sbjct: 41  GERIKVQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGLDSRELTFGSSVE------V 94

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++   ++  N       +EL A+KI+++   +    P+  +  +P     +Y     
Sbjct: 95  QGQLIKSPSKGQN-------VELKAEKIKVIGNCDAKDFPIKYKERHPLEYLRQYPHFRC 147

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           R + L   +  R+    ++        F+   TPI+T++  EGA +  
Sbjct: 148 RTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELF 195



 Score = 37.4 bits (85), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  GG+R      + +  +  G++ EV +      RFG +         PH
Sbjct: 249 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 298

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG   G +R +  +LG  N+++V  FP   + C L
Sbjct: 299 GGFGMGFERYLQCILGVDNIKDVIPFPRFPHSCLL 333


>gi|78211662|ref|YP_380441.1| lysyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|123770824|sp|Q3ANE6|SYK_SYNSC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78196121|gb|ABB33886.1| lysyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 502

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+VMLL    ++R+V  FP+
Sbjct: 452 ALEVGMPPTGGLGIGIDRLVMLLTDCPSIRDVIAFPL 488



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 123/304 (40%), Gaps = 32/304 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V   R  G + F  + D  G  Q+    + A  E   + +  W   I  LV S 
Sbjct: 53  VSVAGRVMTRRVMGKLAFFTLADETGSIQLFL--EKAGLE---AQQEGWFKQITSLVDSG 107

Query: 81  SAETINANIIT---GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL---- 133
               ++  +     G++ +      +L+ A + PLP           R++ R+LDL    
Sbjct: 108 DWLGVSGTLRRTDRGELSVKVSDWRMLTKALQ-PLPDKWHGLADVEKRYRQRYLDLVVSP 166

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF- 191
             R+T  +    R R+++ +R  +   +F+E  TP+L  S P GA      +  N     
Sbjct: 167 DSRETFRR----RARLVSGIRRWLDQRDFLEIETPVL-QSEPGGADARPFETHHNALDLP 221

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  A + + + L+  GF+R +++   FR+E   +   P EF  +++  ++ +   ++ 
Sbjct: 222 LTLRIATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP-EFTSVEIYQAYSDYVGMME 280

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E ++  V EE     T++     I      RR             MH + +     +F
Sbjct: 281 LTEQMVSAVCEEVCGTTTITYQGTEIDLAPPWRR-----------ATMHELVQDATGLDF 329

Query: 312 RVFS 315
             FS
Sbjct: 330 NGFS 333


>gi|119718566|ref|YP_925531.1| lysyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|119539227|gb|ABL83844.1| lysyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 516

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 13/91 (14%)

Query: 482 YDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           +DL+  G E+A            R  ++E  L A      + ++ E+      RA + G 
Sbjct: 424 WDLIIGGMELAPSYSELVDPVIQRERLTEQSLLAAGGDAEAMQLDED----FLRALEYGA 479

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP GG   G+DR+VMLL G   +RE  LFP+
Sbjct: 480 PPMGGTGIGVDRLVMLLTGV-GIRETILFPL 509



 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 109/255 (42%), Gaps = 24/255 (9%)

Query: 5   RTHSCGDL--------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPD 55
           RTH+  D+           +    V ++G V  VR  G + F  +++  G   QV+ +  
Sbjct: 51  RTHTLADVREAWGHLEAAEETQDVVGVAGRVVFVRNTGKLCFATLQEGIGTRLQVMLS-- 108

Query: 56  SACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
               E+ +    +W   +D G  +      I++    G++ + A    + S A   PLPV
Sbjct: 109 --LAEVGEEALDDWKHTVDLGDHVFVEGRVISSK--RGELSVMASSWSMASKALR-PLPV 163

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-AS 172
              +E  E  R + R+ DL      +++V+ R  ++ S+R  +    F+E  TPIL    
Sbjct: 164 L-HKELSEESRVRQRYADLIVRQEARDMVRTRAAVLRSIRSTLDDAGFVEVETPILQMMH 222

Query: 173 SPEGARDFLVPSRVNQ-GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
               AR F   + +N       L  A + + +  +  G DR +++   FR+E   S   P
Sbjct: 223 GGAAARPF--GTHLNAFDQDMTLRIALELFLKRAVVGGVDRVYELGRIFRNEGVDSTHSP 280

Query: 232 GEFYQLDMEMSFVEQ 246
            EF  L+   ++ +Q
Sbjct: 281 -EFTMLEFYEAYGDQ 294


>gi|226292377|gb|EEH47797.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 559

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 14/177 (7%)

Query: 91  TGQIELSAQKIE----ILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-R 145
           TG+ ELS    E    I     ++PL V  +   P       R + L       +I++ R
Sbjct: 163 TGRGELSVTVSELPKLITPCLHDIPLRVKEQETSPYD-----RHVQLLSSPTASDILRTR 217

Query: 146 TRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQ 203
           + II  +R      +F+E  TPIL AS   GA  R F   +        AL  AP+ + +
Sbjct: 218 SAIIQYIRNFFFNRSFMEVETPIL-ASVAGGAVARPFQTCATEFPDRPLALRIAPELWLK 276

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            L+  GFD+ F+I P FR+E   +   P EF   +   ++ + + +++  E++L G+
Sbjct: 277 RLVVGGFDKVFEIGPSFRNEGLDNTHNP-EFTTCEFYHAYADLETLISITESLLTGL 332



 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           RA Q G+PP GG   G+DR+ ML  GA+ + +V  F
Sbjct: 514 RALQWGLPPTGGWGCGVDRLCMLFTGARRIGDVLSF 549


>gi|241953821|ref|XP_002419632.1| lysine-tRNA ligase, putative; lysyl-tRNA synthetase, cytoplasmic,
           putative [Candida dubliniensis CD36]
 gi|223642972|emb|CAX43228.1| lysine-tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 594

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 122/274 (44%), Gaps = 26/274 (9%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVAN----PDS 56
           H  R  +  D+ VS       +SG +   R  G  +   +    G+  QV+A     P  
Sbjct: 114 HLQRGETLKDVTVS-------VSGRIMTKRESGSKLKFYVLKGDGVEVQVMAQAQDAPSV 166

Query: 57  ACFE-IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV 114
             FE + + +R   ++ + G       +T  A    G++ + A K+++L+     LP   
Sbjct: 167 EAFESMHEILRRGDIIGVTGY----PGKTAPAKGGDGELSVFATKVQLLTPCLHMLPTEH 222

Query: 115 FGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
           +G ++  +  R++ R+LDL   D+       R++II  +R  +   +F+E  TPIL   +
Sbjct: 223 YGFKD--QEARYRKRYLDLIMNDSSRDRFKVRSKIIQYIRKFLDNRDFVEVETPILNVIA 280

Query: 173 SPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
               A+ F    + +N   F  +  AP+ + + L+  G DR ++I   FR+E       P
Sbjct: 281 GGATAKPFTTHHNDLNMEMFMRI--APELFLKELVVGGMDRVYEIGRQFRNEGIDMTHNP 338

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
            EF   +   ++ +  D+++  E +   + +E +
Sbjct: 339 -EFTTCEFYQAYADVYDLMDMTELMFSEMVKEIT 371



 Score = 42.0 bits (97), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  +  +REV LFP
Sbjct: 540 ALEYGLPPTAGWGCGIDRLAMFLTDSNTIREVLLFP 575


>gi|301089372|ref|XP_002894992.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262104063|gb|EEY62115.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 283

 Score = 46.6 bits (109), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD++  G E+       H  +++++    +G+ +E + N    L    +    PHGG  
Sbjct: 197 SYDIMIRGEEMVLYAQHVHDPKLLMERMDELGVPQESMRNYIYSL----RLDSLPHGGGG 252

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            G++R+VML LG  N+ + S+FP
Sbjct: 253 IGLERVVMLYLGLGNISKSSMFP 275



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 5/120 (4%)

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM-ASGFDRYFQI 216
           + +++E  TP L   +     ++      +Q +   L Q+PQ YK +    +  +R F+I
Sbjct: 59  SSDYVEIHTPKLVGGASGSGANYFTLKYFDQDA--TLAQSPQTYKHMACDVASLERVFEI 116

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVL-RGVFEEFSNGNTVSNNF 274
            P FR E   + R   E   LD+EM+       +L   E  L R + E++     + + F
Sbjct: 117 GPGFRAETSSTQRHMCELVGLDLEMTIKAHYHKVLTEKEKWLGRLIKEKYDTDFYILDKF 176


>gi|258620161|ref|ZP_05715200.1| asparaginyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|262171670|ref|ZP_06039348.1| asparaginyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|258587519|gb|EEW12229.1| asparaginyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|261892746|gb|EEY38732.1| asparaginyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 466

 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 120/317 (37%), Gaps = 65/317 (20%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL I D             +CF   ++V    +   D 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAIYD------------GSCFNPIQAVVPNNLNNYDN 63

Query: 76  LVMSRSAE-------TINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
            V+  +         TI  +  +GQ  EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGTIVESPASGQAFELAATAVKVVGWVEDADTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y Q        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT-------- 269
            R   EF+ ++ E++F + + +    E++L+ VF+          EF N           
Sbjct: 241 SRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIGRL 300

Query: 270 ---VSNNFLRICYDDAI 283
              V ++F ++ Y DAI
Sbjct: 301 EKFVDSDFAQVDYTDAI 317


>gi|86211231|gb|ABC87291.1| putative lysyl-tRNA synthetase [Ceratopteris richardii]
          Length = 194

 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF----QCGMPPH 536
           +++L  N  E+ +     +   V  Q F +   SK++ ++    +  +F    + G+PP 
Sbjct: 88  RFELFVNRHEVCNAYTELNDPVVQRQCFLDQMKSKQLGDDEAMPIDESFCTALEYGLPPT 147

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR  MLL  ++N++EV LFP
Sbjct: 148 GGWGMGIDRFTMLLTDSQNIKEVLLFP 174


>gi|220927852|ref|YP_002504761.1| lysyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219998180|gb|ACL74781.1| lysyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 499

 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+V+LL  + ++R++ LFP
Sbjct: 458 ALEYGMPPTGGLGIGVDRLVILLTDSASIRDILLFP 493



 Score = 46.2 bits (108), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 123 SIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
            +R++ R++DL  +   KN  + R++II S+R  +    F+E  TP+L T      AR F
Sbjct: 159 DLRYRQRYVDLIVNPEVKNTFILRSKIIKSIRKFLDDRGFLEVDTPLLNTIPGGAAARPF 218

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  G ++ +++   FR+E       P EF  +++ 
Sbjct: 219 ITHHNTLDIDMY-LRIAPELYLKRLIVGGMEKVYEMGRMFRNEGMSVKHNP-EFTMMEVY 276

Query: 241 MSFVEQDDILNTMENVLRGV 260
            ++ +   ++   EN++  V
Sbjct: 277 EAYNDYKGMMELTENLVSTV 296


>gi|83319692|ref|YP_424771.1| asparaginyl-tRNA synthetase [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|123753712|sp|Q2SR42|SYN_MYCCT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|83283578|gb|ABC01510.1| asparaginyl-tRNA synthetase [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 454

 Score = 46.6 bits (109), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 51/235 (21%), Positives = 97/235 (41%), Gaps = 27/235 (11%)

Query: 35  GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI 94
           G  F D+       QVV    +  +E A   R   ++ + G V+    +     +    I
Sbjct: 41  GTTFTDL-------QVVYKTKTKGYEQALQARVSSIVKVIGRVVLTPEKQQKFEVQADAI 93

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRC 154
           EL  Q IE          P+  +    E +R       LR  T   N + + R   +   
Sbjct: 94  ELIDQAIE--------DYPLQKKEHTTEYLR---EIAHLRAKTKTFNAIFKIRSAAAYAI 142

Query: 155 RMIAEN--FIECSTPILTASSPEGARD-FLVPSRVN---QGSFYALPQAPQQYKQL---L 205
                +  F+   +PI+T++  EGA + FLV +R +   +  F+A   +     QL    
Sbjct: 143 HKFFNDRGFVYIHSPIITSNDAEGAGEAFLVTTREDADYEKDFFAKKASLTVSGQLHAEA 202

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            A  F + +   P FR E+  + +   EF+ ++ E++F +  D +  ++++++ +
Sbjct: 203 FAQAFKKVYTFGPTFRAENSNTAKHAAEFWMIEPEVAFADLKDNIQLIQDMVKYI 257


>gi|260772904|ref|ZP_05881820.1| asparaginyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260612043|gb|EEX37246.1| asparaginyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 466

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 105/277 (37%), Gaps = 50/277 (18%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL + D             +CF+  ++V        + 
Sbjct: 16  VNSEVTVRGWIRTRRDSKAGISFLALYD------------GSCFDPIQAVVPNSLNNYQD 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  +   + +       EL+A +++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEITGTVVESPASGQDFELAATELKVVGWVEDAETYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +     
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMF--- 177

Query: 185 RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDED 224
           RV+   F  LP+                       Q      A    + +   P FR E+
Sbjct: 178 RVSTLDFANLPRQENGEIDFNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
             + R   EF+ ++ E++F +  D+    E++L+ VF
Sbjct: 238 SNTSRHLAEFWMVEPEVAFADLHDVAQLAEDMLKYVF 274


>gi|227494387|ref|ZP_03924703.1| lysine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226832121|gb|EEH64504.1| lysine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 521

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 11/93 (11%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+A+         ++    E    A +N      V++  F     A + GM
Sbjct: 431 KWDLYVRGFELATAYSELVDPVVQRERFEAQALAAANGDPEAMVLDEDF---LEAMEQGM 487

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG+  G+DR++M L G + +RE   FP+++
Sbjct: 488 PPTGGMGMGLDRLLMALTG-QGIRETITFPLTK 519


>gi|239621546|ref|ZP_04664577.1| lysyl-tRNA synthetase 1 [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|312133944|ref|YP_004001283.1| lysu [Bifidobacterium longum subsp. longum BBMN68]
 gi|239515421|gb|EEQ55288.1| lysyl-tRNA synthetase 1 [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|311773240|gb|ADQ02728.1| LysU [Bifidobacterium longum subsp. longum BBMN68]
          Length = 560

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 6/161 (3%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I S A + PLP    ++  E  R +  ++ +  D   +N+V+ R++ +
Sbjct: 182 TGELSVFATEWAIASKALQ-PLPAL-HKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAV 239

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R      +F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 240 ASLRRTFDDHDFLEVETPMLQTLHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 298

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           G DR F+I   FR+E   +   P EF  ++   ++   D I
Sbjct: 299 GIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYGTYDSI 338



 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 468 KWDLYVRGFELATG--YSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 526 PAGGMGMGIDRLLIALTGA-TIRETITFPL 554


>gi|94676569|ref|YP_589016.1| lysyl-tRNA synthetase-like GenX [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|166229782|sp|Q1LSP8|SYK3_BAUCH RecName: Full=Uncharacterized protein YjeA
 gi|94219719|gb|ABF13878.1| lysyl-tRNA synthetase-like GenX [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 327

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 6/92 (6%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG-----GLYRAFQCGM 533
           A ++++  +G E+A+G      +++  + F     +K+V  NR        L  A +CG+
Sbjct: 235 AERFEVYFHGIELANGSRELTDADLQRERFMQEN-NKQVAMNRPPRLIDEQLLAALECGL 293

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           P   G+A GIDR++ML L AK++ EV  F ++
Sbjct: 294 PSCSGVALGIDRLLMLTLKAKHISEVMAFSVT 325


>gi|156547524|ref|XP_001606841.1| PREDICTED: similar to BcDNA.GH06451 [Nasonia vitripennis]
          Length = 555

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 47/226 (20%), Positives = 95/226 (42%), Gaps = 10/226 (4%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V++ GWVHR+R  G  ++F+ +RD  G  Q + N        A  + +E  + I G +  
Sbjct: 135 VQIFGWVHRLRRQGKAMMFITLRDGTGFLQCILNDKLCQTYDAVVLNTEASVHIFGTLKP 194

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDLRRDTL 138
                       G +EL     +++  +       +  E  +P+ ++   R + +R +  
Sbjct: 195 ----VPEGKTAPGGLELLVDYWKLIGNSPPGGADGILNEEAHPD-VQLDNRHIMIRGENT 249

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
            + ++ R+ +  + R       + E + P L  +  EG       +   + ++  L Q+ 
Sbjct: 250 SRILIMRSVLTQAFRDHYKDRGYCEVTPPTLVQTQVEGGSTLFKLNYFGEEAY--LTQSS 307

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           Q Y +  + +  D Y  IA  +R E  R+ R   E+  ++ E  F+
Sbjct: 308 QLYLETCIPAMGDVYC-IAQSYRAEQSRTRRHLAEYTHIEAECPFI 352



 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R    + +L+ + +VGI        +       + G  PHGG   G+
Sbjct: 472 LLPNVGEIVGGSMRIWDHDALLEGYKSVGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 527

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           +R +  LL   ++REV L+P
Sbjct: 528 ERFICWLLNRYHIREVCLYP 547


>gi|326491949|dbj|BAJ98199.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 571

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 76/153 (49%), Gaps = 8/153 (5%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--R 178
           +  R+  R+LDL  +   ++I + R++II+ +R  +   N +E  TP++    P GA  +
Sbjct: 217 QETRYPQRYLDLMVNHQVRHIFRTRSKIISFIRKFLDERNLLEVETPMMNLI-PGGASAK 275

Query: 179 DFLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            F+   + +N   +  +  AP+ + + L+  G DR ++I   FR+E       P EF   
Sbjct: 276 PFVTHHNELNMDQYMRI--APELHLKELVVGGLDRVYEIGKEFRNEGFDLTHSP-EFTGC 332

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
           +  M++ + +D++   E +L  +  E +    +
Sbjct: 333 EFYMAYADYNDLMELTEIILSSMVMELTGSTKI 365



 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF----QCGMPPH 536
           +++L  N  E+ +     +   V  Q F +   S++  ++    L  AF    +  +PP 
Sbjct: 477 RFELFINKHEVCNAYTELNDPLVQRQRFEDQLRSRQSGDDEAMALDEAFCTALEYALPPT 536

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDRI MLL  ++N++EV LFP
Sbjct: 537 GGWGMGIDRIAMLLTDSQNIKEVLLFP 563


>gi|261867508|ref|YP_003255430.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|293391385|ref|ZP_06635719.1| putative lysyl-tRNA synthetase-like protein GenX [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|261412840|gb|ACX82211.1| putative lysyl-tRNA synthetase-like protein GenX [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|290951919|gb|EFE02038.1| putative lysyl-tRNA synthetase-like protein GenX [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 323

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 12/111 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------V 511
           F   Q  +  +   DL   + F++     G E+A+G      +   L+ F         +
Sbjct: 213 FPASQAALAQISSEDLRVAERFEF--YYKGLELANGFHELSDAREQLRRFEQDNHQREKM 270

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+  + ++ R   L  A Q G+P   G+A G+DR++M+ +GA++++EV  F
Sbjct: 271 GLPPQTIDTR---LLSALQAGIPNCSGVALGVDRLLMIAMGAESIKEVISF 318


>gi|19075887|ref|NP_588387.1| mitochondrial lysine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|74582575|sp|O74858|SYKM_SCHPO RecName: Full=Lysyl-tRNA synthetase, mitochondrial; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS; Flags: Precursor
 gi|3766370|emb|CAA21422.1| mitochondrial lysine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe]
          Length = 531

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 3/135 (2%)

Query: 125 RFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           RF+ RF+D+  +T    ++ KR RII S+R       F+E  TPIL+           + 
Sbjct: 186 RFEKRFVDMMSNTKSLELLEKRYRIIESIRKFFSERGFLEVETPILSHHFGGATARPFIT 245

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           S +++     L  AP+ + + L+  G +R F++   FR+E   +   P EF   +   ++
Sbjct: 246 SDIHKLPL-TLRCAPELWLKQLVIGGMNRVFELGKNFRNEGIDATHNP-EFTSCEAYCAY 303

Query: 244 VEQDDILNTMENVLR 258
           +  + +    E ++R
Sbjct: 304 LNLEGMKKLTEELIR 318



 Score = 37.7 bits (86), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 1/78 (1%)

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           +CN +E  +  +  +  +   Q +  + +  +           A + G+PP  G   G+D
Sbjct: 449 ICNAYEEENDPVAQY-HKFQAQKYDRLQLGDDETPAPDSDFVHALEYGLPPTAGWGMGVD 507

Query: 545 RIVMLLLGAKNVREVSLF 562
           R+VML+ G   + E+  F
Sbjct: 508 RLVMLMTGQSKISEILPF 525


>gi|117924256|ref|YP_864873.1| tRNA synthetase, class II (D, K and N) [Magnetococcus sp. MC-1]
 gi|117608012|gb|ABK43467.1| tRNA synthetase, class II (D, K and N) [Magnetococcus sp. MC-1]
          Length = 317

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 14/97 (14%)

Query: 479 AFQYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           A ++++  NG E+A+G +        R+ + +V  Q     G+S   V+ RF     A Q
Sbjct: 225 AQRFEVYVNGVELANGYLELTDGAEQRHRLEQVNAQRLVQ-GLSPIAVDQRF---LAALQ 280

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G+P   G+A G+DR++ML  GA ++ EV   P SQ 
Sbjct: 281 AGLPAVSGVALGVDRLLMLQCGATSLDEV--MPFSQQ 315


>gi|325264319|ref|ZP_08131050.1| asparagine--tRNA ligase [Clostridium sp. D5]
 gi|324030390|gb|EGB91674.1| asparagine--tRNA ligase [Clostridium sp. D5]
          Length = 463

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 102/261 (39%), Gaps = 32/261 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFE-IAKSVRSEWVLCIDGLV 77
           V + GW+  +R      F+ + D  ++   Q+V +     FE ++K      ++    LV
Sbjct: 21  VTVGGWIRSIRDSKTFGFIVVNDGSYFEPLQIVYHDSMENFEEVSKQNVGAAIIVTGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            +  A+           E+ A ++ I  + A + PL    +R   E +R     L  R +
Sbjct: 81  ATPQAKQ--------PFEIQADEVTIEGTSAPDYPLQ--KKRHSFEYLR-TISHLRPRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T       R+ I  ++        F+   TP++T S  EGA +    + ++  +    P 
Sbjct: 130 TFQAVFRVRSMIAFAIHQFFQDRGFVYVHTPLITGSDCEGAGEMFRVTTLDMDNVPKNPD 189

Query: 197 APQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               Y Q                    A  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 190 GTIDYSQDFFGKETNLTVSGQLNGETFAQAFRSIYTFGPTFRAENSNTTRHAAEFWMIEP 249

Query: 240 EMSFVEQDDILNTMENVLRGV 260
           E++F + DD ++  E +L+ V
Sbjct: 250 EIAFADLDDNMDLAEAMLKYV 270



 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + ++Q    + + +E  + +F    R +  G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDYDKLVQRMKEMNLGEE--DYKFYLDLRRY--GSTRHAGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMSNIRDVVPFPRTVNNCEL 463


>gi|124021897|ref|YP_001016204.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|166229815|sp|A2C629|SYK_PROM3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123962183|gb|ABM76939.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 508

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 116/276 (42%), Gaps = 20/276 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V   R  G + F  + D  G  Q+    D A  + A S        +    +  
Sbjct: 61  VSVAGRVMARRVMGKLAFYTLADETGTIQLYL--DKATIDAAASNELASGTFVQLTTLVD 118

Query: 81  SAETINANIIT-----GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-- 133
           + + I    +      G++ +  Q+ +ILS + + PLP           R++ R+LDL  
Sbjct: 119 AGDWIGVTGVLRRTDRGELSVKVQQWQILSKSLQ-PLPDKWHGLADVEKRYRQRYLDLIV 177

Query: 134 ---RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQG 189
               R+T  +    R  +++++R  +    F+E  TP+L A +    AR F+        
Sbjct: 178 SPQSRETFRR----RALMVSAIRRWLDDRAFLEIETPVLQAEAGGAEARPFITHHNTLDL 233

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A + + + L+  GF+R +++   FR+E   +   P EF  +++  ++ +  D+
Sbjct: 234 PLY-LRIATELHLKRLVVGGFERVYELGRIFRNEGMSTRHNP-EFTSVEVYQAYADYIDM 291

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +   E ++  V  +      ++   + I      RR
Sbjct: 292 MVLTEQLISSVCTQICGSTRITYQGIEIDLTPPWRR 327



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A + GMPP GG+  GIDR+VML   + ++R+V  FP+
Sbjct: 464 QALEVGMPPTGGLGIGIDRLVMLFTDSPSIRDVIAFPL 501


>gi|15839152|ref|NP_299840.1| asparaginyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|20139947|sp|Q9PAF5|SYN_XYLFA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|9107777|gb|AAF85360.1|AE004064_2 asparaginyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 466

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 117/318 (36%), Gaps = 57/318 (17%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   VGS V + GWV   R    G+ F+ + D   +   QVV       +E    VR   
Sbjct: 12  GKIQVGSEVTVRGWVRTRRDSKAGLSFVSVSDGSCFAAIQVVTPAHLPNYET--EVRKLT 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
             C   +V+   A ++       Q E+ AQ IE++   E+        +++  S+ F   
Sbjct: 70  TGCAV-IVIGTLAPSLGQG---QQFEIQAQSIEVVGWVEDPETYPIQPKQH--SLEFLRE 123

Query: 130 FLDLR-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVN 187
              LR R  L   + +    ++    R   EN +   +TPI+T S  EGA       RV+
Sbjct: 124 VAHLRPRTNLFGAVARIRHCLSQAVHRFFHENGYYWITTPIITTSDAEGAGQMF---RVS 180

Query: 188 QGSFYALPQAPQQ----------YKQLLMASG----------FDRYFQIAPCFRDEDPRS 227
                 LP+               +  L  SG            + +   P FR E+  +
Sbjct: 181 TLDLVNLPRTETGGIDFSHDFFGKETFLTVSGQLNVEAYALALSKVYTFGPTFRAENSHT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT------------------ 269
            R   EF+ ++ E++F +  +     E  L+ +F+      T                  
Sbjct: 241 PRHLAEFWMIEPEIAFADLAEDARVAEQFLKFLFKTVLEERTDDLAFITERVEKTTISKL 300

Query: 270 ---VSNNFLRICYDDAIR 284
              + + F RI Y DAI+
Sbjct: 301 EGFIKSPFERIEYTDAIK 318


>gi|227537220|ref|ZP_03967269.1| lysine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242935|gb|EEI92950.1| lysine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 572

 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 125/292 (42%), Gaps = 37/292 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---------VL 71
           V ++G +   R  G   F++++D  G  Q     D  C    K++ +           ++
Sbjct: 55  VSIAGRMMTRRVMGNASFIELQDSTGRIQAYFKRDDICPGEDKTLYNTVFKKLLDIGDII 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G V +   + I  ++   Q  + A+ ++ L V +      F     PE  R++ R++
Sbjct: 115 GIKGYVFTTQTDAICIHV--EQFVVLAKSLKPLPVVKSADGKTFDAVTDPE-FRYRQRYV 171

Query: 132 DLR-----RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPS 184
           DL      RDT     VK +++  ++R  +  +  +E  TP+L  S P GA  R F+   
Sbjct: 172 DLVVNPQVRDTF----VKVSKVKTAIRDFLNEQGALEVDTPVL-QSIPGGAAARPFITHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  L+  +++ 
Sbjct: 227 NALDIPLY-LRIANELYLKRLIVGGFDWVYEFSRNFRNEGMDRTHNP-EFTVLEFYVAYK 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNT---VSNN-------FLRICYDDAIRRY 286
           +   ++ T E +L  V    +NG T   V  N       + RI   D+I+ Y
Sbjct: 285 DYVWMMETTEKLLEKV-ALATNGTTSVQVGENQINFAPPYKRISIYDSIKEY 335



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           R+ + GMPP  GI  GIDR+ ML+    ++++V  FP
Sbjct: 460 RSLEYGMPPTAGIGIGIDRLAMLMTNQASIQDVLFFP 496


>gi|123447017|ref|XP_001312254.1| lysyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
 gi|121894094|gb|EAX99324.1| lysyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
          Length = 605

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 52/256 (20%), Positives = 115/256 (44%), Gaps = 13/256 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++  + ++R HG + F ++ +     Q++    S  ++ AK         +  +V   
Sbjct: 140 VSVASRIAQLRAHGNLYFFEMYESTFKLQLMCRSQSY-YDGAKFKEEVSSFHLGDIV--- 195

Query: 81  SAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
            AE   A   TG++ +   K+ +L+    ++P     + E    +R++ RF DL  +  +
Sbjct: 196 GAEGFPARSKTGELSVVVTKLVLLAPCLFQMPKHKLEDLE----VRYRQRFFDLIVNREN 251

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           + I + R +++  +R  +   +F E  TPI+   +    A+ F+          + L  A
Sbjct: 252 RQIFETRCKVVKMIRGFLDDLDFTEVETPIMWKTAGGATAKPFITHHNALDIDLW-LRVA 310

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ + ++L+  G +R +++   FR+E       P EF   +  M++ + +D+++  E + 
Sbjct: 311 PELFLKMLVVGGMNRVYELGKQFRNEGIDLTHNP-EFTSCEFYMAYADYNDLMDLTEKLY 369

Query: 258 RGVFEEFSNGNTVSNN 273
           + +  E       S N
Sbjct: 370 QKIVMEVKGTLKFSIN 385



 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A +  +PP  G   G+DR+VMLL    ++REV LFP+
Sbjct: 547 ALEYALPPTAGWGCGVDRLVMLLTNQVSIREVLLFPL 583


>gi|296454791|ref|YP_003661935.1| lysyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301]
 gi|296184223|gb|ADH01105.1| lysyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301]
          Length = 560

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 6/161 (3%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I S A + PLP    ++  E  R +  ++ +  D   +N+V+ R++ +
Sbjct: 182 TGELSVFATEWAIASKALQ-PLPAL-HKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAV 239

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R      +F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 240 ASLRRTFDDHDFLEVETPMLQTLHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 298

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           G DR F+I   FR+E   +   P EF  ++   ++   D I
Sbjct: 299 GIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYGTYDSI 338



 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 468 KWDLYVRGFELATG--YSELNDPVVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 526 PAGGMGMGIDRLLIALTGA-TIRETITFPL 554


>gi|290978180|ref|XP_002671814.1| aspartyl-tRNA synthetase [Naegleria gruberi]
 gi|284085386|gb|EFC39070.1| aspartyl-tRNA synthetase [Naegleria gruberi]
          Length = 461

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 105/261 (40%), Gaps = 25/261 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  +RL     RV   G + F+ +R +       ++   ACF        E V  I G+ 
Sbjct: 39  GETIRLIARASRVVKKGKLCFVRLRRN-------SHSIQACFLAKNDQEREMVKYIGGIP 91

Query: 78  MSRSAETI--------NANIITGQIELSAQKIEILSVAEEL--PLPVFGEREYPESIRFK 127
                E +         +N    ++EL  ++I  LS A++L   L    +     S+  K
Sbjct: 92  HESIVEVVGIIVMRKSKSNETVSELELEMKEIYCLSRAQKLDYELDELEDMRQSRSLHTK 151

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCR-MIAENFIECSTP-ILTASSPEGARDFLVPSR 185
            R++ LR   +H +I K   +I    C  M +++F E  TP I+   S      F     
Sbjct: 152 -RYVSLRHSFMH-HIFKLQSLIGRKFCEYMYSKDFTEIHTPHIVKNQSDNNISSFTFDYF 209

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L  +   ++QL +  G DR F+I+  F      +     E   L+  M+   
Sbjct: 210 ---GNSVELTTSSHLHQQLAIHGGLDRVFEISCAFEKHHGCTHVHLNEKTTLNFGMTIAS 266

Query: 246 Q-DDILNTMENVLRGVFEEFS 265
              ++++ ++ +L  + +E S
Sbjct: 267 HYHEVISVVKELLNYIIDEIS 287


>gi|255326539|ref|ZP_05367620.1| lysine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255296415|gb|EET75751.1| lysine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 1085

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 479  AFQYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV NG E+             R  ++E  L+A S    + EV E+       A +
Sbjct: 991  AERWDLVINGMEMGCAYSELADPLVQRERLTEQSLKAASGDLEAMEVDED----FLYALE 1046

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             GMPP GG+  G+DR+VM LL    +R V  FP
Sbjct: 1047 TGMPPTGGLGLGVDRLVM-LLAQTQIRGVLSFP 1078



 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 30/247 (12%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           +SG +  +R HGG++F  + +     QV+         + + +  E  L +     SR+ 
Sbjct: 647 VSGRIRALRNHGGVLFATLIEGDETLQVI---------MERGLVGELPLSL----ASRNL 693

Query: 83  ETINANIITGQIELSAQKIEIL------SVAEEL-PLPVFGEREYPESIRFKYRFLDL-- 133
           +T +   + G   +S    + L        ++ L P+P F     PE+ R + R  DL  
Sbjct: 694 DTGDIITVQGTYGVSRNGTQSLIATSWHMASKSLHPIP-FDSFTDPEA-RLRRRSTDLLV 751

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQ-GSF 191
             D + +N+  RT +I ++R R+ AE F+E  TPIL T      AR F   + +N  G  
Sbjct: 752 HPDQM-QNLRLRTAVIKALRARLDAEGFLEVETPILHTVHGGASARPFR--TYINAYGED 808

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  AP+ Y + L+  G    +++   FR+E   +   P EF  L+    + +   +  
Sbjct: 809 LTLRIAPELYLKRLVVGGSGPVYELGRDFRNEGADATHNP-EFTVLEAYRPYADYVQMRE 867

Query: 252 TMENVLR 258
             E +++
Sbjct: 868 LTERLIK 874


>gi|28199814|ref|NP_780128.1| asparaginyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182682566|ref|YP_001830726.1| asparaginyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130160|sp|Q87A82|SYN_XYLFT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|28057935|gb|AAO29777.1| asparaginyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182632676|gb|ACB93452.1| asparaginyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307578846|gb|ADN62815.1| asparaginyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 466

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 119/318 (37%), Gaps = 57/318 (17%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   VGS V + GWV   R    G+ F+ + D   +   QVV       +E    VR   
Sbjct: 12  GKIQVGSEVTVRGWVRTRRDSKAGLSFVSVSDGSCFAAIQVVTPAHLPNYE--TEVRKLT 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
             C   +V+   A ++       Q E+ AQ IE++   E+        +++  S+ F   
Sbjct: 70  TGCAV-IVIGTLAPSLGQG---QQFEIQAQSIEVVGWVEDPETYPIQPKQH--SLEFLRE 123

Query: 130 FLDLR-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVN 187
              LR R  L   + +    ++    R   EN +   +TPI+T S  EGA       RV+
Sbjct: 124 VAHLRPRTNLFGAVARIRHCLSQAVHRFFHENGYYWITTPIITTSDAEGAGQMF---RVS 180

Query: 188 QGSFYALPQAPQQ----------YKQLLMASG----------FDRYFQIAPCFRDEDPRS 227
                 LP+               +  L  SG            + +   P FR E+  +
Sbjct: 181 TLDLVNLPRTETGGIDFSHDFFGKETFLTVSGQLNVEAYALALSKVYTFGPTFRAENSHT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE--------------EFSNGNTVS-- 271
            R   EF+ ++ E++F +  +     E  L+ +F+              E     T+S  
Sbjct: 241 PRHLAEFWMIEPEIAFADLAEDARVAEQFLKFLFKTVLEERDDDLAFITERVEKTTISKL 300

Query: 272 -----NNFLRICYDDAIR 284
                + F RI Y DAI+
Sbjct: 301 EGFINSPFERIEYTDAIK 318


>gi|150014968|ref|YP_001307222.1| asparaginyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|226695284|sp|A6LPI6|SYN_CLOB8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|149901433|gb|ABR32266.1| asparaginyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 464

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 118/304 (38%), Gaps = 51/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           + +SGW+  +R      F+++ D   +   QVV +     F EI+K   S  +  I  LV
Sbjct: 22  ITISGWIRTLRSSNAFGFIEVNDGSFFKNIQVVFDDKLNNFKEISKLPISSSISVIGILV 81

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A+ I I  ++     P+  +R   E +R     L  R + 
Sbjct: 82  ATPEAKQ--------PFEIQAKNIIIEGMSNS-DYPLQKKRHTFEYLR-TIAHLRPRSNA 131

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL--------VPSRVNQG 189
                  R+    ++      +NF+   TPI+T S  EGA +           P     G
Sbjct: 132 FAATFRVRSVAAYAIHKFFQDQNFVYTHTPIITGSDCEGAGEMFRVTTLDPKTPELSKDG 191

Query: 190 S------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           S      F+          QL     A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 192 SVDFSKDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSNTTRHAAEFWMIEPE 251

Query: 241 MSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRICY 279
           ++F +  D +   EN+L+ V +          EF N            + VS++F ++ Y
Sbjct: 252 IAFADLQDDMELAENMLKYVIKYVMDECPEELEFFNQFVDKGLLERLNHVVSSDFAKVTY 311

Query: 280 DDAI 283
            +A+
Sbjct: 312 TEAV 315


>gi|291516409|emb|CBK70025.1| Lysyl-tRNA synthetase (class II) [Bifidobacterium longum subsp.
           longum F8]
          Length = 560

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 6/161 (3%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I S A + PLP    ++  E  R +  ++ +  D   +N+V+ R++ +
Sbjct: 182 TGELSVFATEWAIASKALQ-PLPAL-HKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAV 239

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R      +F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 240 ASLRRTFDDHDFLEVETPMLQTLHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 298

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           G DR F+I   FR+E   +   P EF  ++   ++   D I
Sbjct: 299 GIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYGTYDSI 338



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 468 KWDLYVRGFELATG--YSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 526 PAGGMGMGIDRLLIALTGA-TIRETITFPL 554


>gi|303322843|ref|XP_003071413.1| lysyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240111115|gb|EER29268.1| lysyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320032821|gb|EFW14771.1| lysyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 574

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 12/163 (7%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGA-RDFLVPSRVNQGSFYALPQAPQQYKQ 203
           R+ I+  +R   +   FIE +TPI+ A++     R F   +  +     AL  AP+ + +
Sbjct: 237 RSSIVQHIRNFFLERRFIEVNTPIIAAAAGGAIARPFHTTASESIEQLLALRIAPELWLK 296

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPG----EFYQ--LDMEMSFVEQDDILNTMENVL 257
            L+  GFDR F+I P FR+E       P     EFYQ   D+E      + +L+ +   +
Sbjct: 297 RLIVGGFDRIFEIGPSFRNEGLDKTHNPEFTTCEFYQAFADLECLMQMTETLLSGLSQNI 356

Query: 258 RGVFEEFSNGNTV----SNNFLRICYDDAIRR-YGTDKPDLRN 295
           R + E+    + +    S  F RI +  A+    G   PDL++
Sbjct: 357 RELNEKLGTLHPIYVDFSTPFRRIDFVPALESAMGHTLPDLKS 399


>gi|323492435|ref|ZP_08097583.1| asparaginyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323313222|gb|EGA66338.1| asparaginyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 466

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 107/275 (38%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V          
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYED 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKIVESPAKGQDFELAATDVKVVGWVEDADTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     +    Y +        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMENLPRTDKGDVDYNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + +D+    E++L+ VF+
Sbjct: 241 SRHLAEFWMVEPEVAFADLNDVAKLSEDMLKYVFK 275


>gi|326203393|ref|ZP_08193258.1| lysyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325986651|gb|EGD47482.1| lysyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 499

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 27/36 (75%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  G+DR+++LL  + ++R++ LFP
Sbjct: 458 ALEYGMPPTGGLGIGVDRLIILLTDSASIRDIMLFP 493



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 110/246 (44%), Gaps = 13/246 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G    ++G +   R  G   F D++D  G  Q+    D    E+ +  +   +    G +
Sbjct: 61  GQTASIAGRLMSKRGMGKAGFCDLQDRDGKIQLYVRKDEVGDEVYEMFKKYDI----GDI 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-GEREYPESIRFKYRFLDLRRD 136
           +    E    +   G+I +  ++I +LS +       + G ++    +R++ R++DL  +
Sbjct: 117 VGVKGEIFKTH--KGEISIKVKEITLLSKSLLPLPEKWHGLKD--TDLRYRQRYVDLIVN 172

Query: 137 TLHKNI-VKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
              KN  + R++II S+R  +    F+E  TP+L T      AR F+          Y L
Sbjct: 173 PEVKNTFILRSKIIKSIRKFLDNRGFLEVDTPLLNTIPGGATARPFVTHHNTLDIDMY-L 231

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  G ++ +++   FR+E       P EF  +++  ++ +   ++   E
Sbjct: 232 RIAPELYLKRLIVGGMEKVYEMGRMFRNEGMSVKHNP-EFTMMEVYEAYNDYKGMMELTE 290

Query: 255 NVLRGV 260
           N++  V
Sbjct: 291 NLISTV 296


>gi|258405839|ref|YP_003198581.1| asparaginyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257798066|gb|ACV69003.1| asparaginyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 463

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 67/313 (21%), Positives = 117/313 (37%), Gaps = 53/313 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           +++ GWV   R      FL++ D   +   QV+ + D   +   + + +   + + G ++
Sbjct: 19  IQIMGWVRTKRDSKQFTFLEVNDGSCLKNIQVIVDSDVPSYSELEGINTGASVRLRGKLV 78

Query: 79  SRSAETINANIITGQI-ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
               +        GQ  E+ A +I ++  A+    P+  +R   E +R       LR  T
Sbjct: 79  ESPGK--------GQKWEVQATEIALIGAADPEGYPLQKKRHSDEFLR---TIAQLRPRT 127

Query: 138 LHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVPSRVN 187
                + R R  +  ++        F    TPI+T S  EGA         D   P R N
Sbjct: 128 NKYGALYRIRAELAQAIHRFFHERGFYYVHTPIITGSDCEGAGEMFQVTSLDMNTPPRAN 187

Query: 188 -----QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+   A+     Q    ++A      +   P FR E+  + R   EF+ ++ 
Sbjct: 188 GQVDHSQDFFGQSAMLTVSGQLSAEVLACSLGNVYTFGPTFRAENSNTPRHAAEFWMVEP 247

Query: 240 EMSFVEQDDILNTMENVL-------------------RGVFEEFSN--GNTVSNNFLRIC 278
           EM+F +  D ++  E  L                   R V +E S    N   N F+R+ 
Sbjct: 248 EMAFADLKDDIDLAEAFLQYLVTHIREHCSEDLDLFTRFVDKELSATLDNIAENAFVRLP 307

Query: 279 YDDAIRRYGTDKP 291
           Y +A+      +P
Sbjct: 308 YREAVEILQKARP 320



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    EV+    +++G+ +E  E  +  L R    G  PH G   G 
Sbjct: 380 LVPRVGEIIGGSQREERLEVLEGRIADMGLPREEYE-WYLDLRR---YGTVPHAGFGMGF 435

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R++M L G  N+R+   FP +
Sbjct: 436 ERVLMFLTGVGNIRDAVPFPRT 457


>gi|23466201|ref|NP_696804.1| lysyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|189440639|ref|YP_001955720.1| lysyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|227546547|ref|ZP_03976596.1| lysyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|322691799|ref|YP_004221369.1| lysyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217]
 gi|23326943|gb|AAN25440.1| lysyl-tRNA synthetase 1 [Bifidobacterium longum NCC2705]
 gi|189429074|gb|ACD99222.1| Lysyl-tRNA synthetase class II [Bifidobacterium longum DJO10A]
 gi|227212864|gb|EEI80743.1| lysyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|320456655|dbj|BAJ67277.1| lysyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217]
          Length = 560

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 6/161 (3%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I S A + PLP    ++  E  R +  ++ +  D   +N+V+ R++ +
Sbjct: 182 TGELSVFATEWAIASKALQ-PLPAL-HKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAV 239

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R      +F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 240 ASLRRTFDDHDFLEVETPMLQTLHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 298

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           G DR F+I   FR+E   +   P EF  ++   ++   D I
Sbjct: 299 GIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYGTYDSI 338



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 468 KWDLYVRGFELATG--YSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 526 PAGGMGMGIDRLLIALTGA-TIRETITFPL 554


>gi|320459194|dbj|BAJ69815.1| lysyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 559

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 6/161 (3%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I S A + PLP    ++  E  R +  ++ +  D   +N+V+ R++ +
Sbjct: 182 TGELSVFATEWAIASKALQ-PLPAL-HKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAV 239

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R      +F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 240 ASLRRTFDDHDFLEVETPMLQTLHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 298

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           G DR F+I   FR+E   +   P EF  ++   ++   D I
Sbjct: 299 GIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYGTYDSI 338



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 468 KWDLYVRGFELATG--YSELNDPVVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 526 PAGGMGMGIDRLLIALTGA-TIRETITFPL 554


>gi|317473689|ref|ZP_07932976.1| asparaginyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316898810|gb|EFV20837.1| asparaginyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 461

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 120/303 (39%), Gaps = 51/303 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV   R      FL I D   +   Q+V   + + F   K +     + + G++ 
Sbjct: 21  LSLCGWVRSNRDSRDFGFLVINDGTFFEPIQIVYGKELSNFTEVKKLSVGTAVIVKGIL- 79

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELP--LPVFGEREYPESIRFKYRFLDLRRD 136
               ET +A       E+ A+ +E   V  E P   P+  +R   E +R     L  R +
Sbjct: 80  ---TETPDAR---QPFEIQAESVE---VEGESPSDYPLQKKRHSFEYLR-TIAHLRPRAN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPS----RVNQGS- 190
           T       R+ I  ++    +  +F+   TPI++    EGA + F V +     ++QG  
Sbjct: 130 TFQAVYRVRSLIAYAIHKFFMERDFVYVHTPIISGQDCEGAGEMFQVTTLDLEELSQGKK 189

Query: 191 ------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 F+    +     QL     A  F   +   P FR E+  + R   EF+ ++ EM
Sbjct: 190 LDYREDFFERETSLTVSGQLNGEAFAQAFRNIYTFGPTFRAEESNTTRHAAEFWMIEPEM 249

Query: 242 SFVEQDDILNTMENVLR--------------GVFEEFSNG-------NTVSNNFLRICYD 280
           +F + +D +   E++++              G F EF +        +   + F RI Y 
Sbjct: 250 AFADLEDNMLLAEHMIKYIIQYVLEQAPEEMGFFNEFVDKGLLDRLHHVAESEFARITYT 309

Query: 281 DAI 283
           +AI
Sbjct: 310 EAI 312


>gi|240947998|ref|ZP_04752416.1| lysyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240297668|gb|EER48142.1| lysyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 327

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 106/268 (39%), Gaps = 45/268 (16%)

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRM-NEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
           L  +P Y +  + A G G     C    NE A  +  P    + W            P  
Sbjct: 77  LMTSPEYHMKRLLAAGSGAIYQLCKVFRNEEAGKRHNPEFTMLEW----------YRPYF 126

Query: 377 KHLNIVNT--EAIRVRLDMQDGDSC-------FFIAGDPLKFCS--FAADARNHIAQELG 425
               ++N   + ++  LD +  +S         ++  DPL          AR H  Q   
Sbjct: 127 DMYRLINEVDDLLQQILDCEPAESYSYQFVFQTYVGLDPLSATKSQLVEKARKHGLQCDD 186

Query: 426 IINCNCFEFCWIMDFPFYEWNE----EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             N +      ++ F F E  E    +E+     H P T  Q  +  +   D    + F+
Sbjct: 187 DENRDT-----LLQFLFSEIVEANIGKERPTAVYHFPST--QAALAQVSSEDHRVSERFE 239

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFS-------NVGISKEVVENRFGGLYRAFQCGMP 534
           +     G E+A+G      ++  ++ F+        +G+  + ++ RF     A + GMP
Sbjct: 240 F--YYKGLELANGFHELDDAQEQIRRFNADNVEREKMGLPPQALDVRFLA---ALEAGMP 294

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              G+A G+DR++ML LGA++++EV  F
Sbjct: 295 NCSGVALGVDRLIMLALGAEHIKEVISF 322



 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 28/129 (21%), Positives = 61/129 (47%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           ++++KR +I+  +R        +E  TP+L+  S         +  FL P        Y 
Sbjct: 18  EHLLKRAKIMKEIRQFFSDRGVLEVETPVLSEFSVTDVHLSTFSTQFLSPFEREAKPLY- 76

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+    + +   ++N +
Sbjct: 77  LMTSPEYHMKRLLAAGSGAIYQLCKVFRNEEAGKRHNP-EFTMLEWYRPYFDMYRLINEV 135

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 136 DDLLQQILD 144


>gi|33862420|ref|NP_893980.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|39932063|sp|Q7U3A4|SYK_PROMM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33640533|emb|CAE20322.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
          Length = 508

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 27/38 (71%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A + GMPP GG+  GIDR+VML   + ++R+V  FP+
Sbjct: 464 QALEVGMPPTGGLGIGIDRLVMLFTDSPSIRDVIAFPL 501



 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 119/282 (42%), Gaps = 32/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACF-EIAKSVRSEWVLCIDGL 76
           V ++G V   R  G + F  + D  G  Q+    A  D+A   E+A     +    +D  
Sbjct: 61  VSVAGRVMTRRVMGKLAFYTLADETGTIQLYLEKATIDAAASNELASGTFVQLTTLVDAG 120

Query: 77  -------VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
                  V+ R+          G++ +  Q+ +ILS + + PLP           R++ R
Sbjct: 121 DWIGVTGVLRRTDR--------GELSVKVQQWQILSKSLQ-PLPDKWHGLADVEKRYRQR 171

Query: 130 FLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
           +LDL      R+T  +    R  +++++R  +    F+E  TP+L A +    AR F+  
Sbjct: 172 YLDLIVSPQSRETFRR----RALMVSAIRRWLDDRAFLEIETPVLQAEAGGAEARPFITH 227

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  A + + + L+  GF+R +++   FR+E   S R   EF  +++  ++
Sbjct: 228 HNTLDLPLY-LRIATELHLKRLVVGGFERVYELGRIFRNEG-MSTRHNPEFTSVEVYQAY 285

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            +  D++   E ++  V  +      ++   + I      RR
Sbjct: 286 ADYIDMMVLTEQLISSVCTQICGSTRITYQGIEIDLTPPWRR 327


>gi|68472101|ref|XP_719846.1| hypothetical protein CaO19.6749 [Candida albicans SC5314]
 gi|68472336|ref|XP_719729.1| hypothetical protein CaO19.14041 [Candida albicans SC5314]
 gi|46441560|gb|EAL00856.1| hypothetical protein CaO19.14041 [Candida albicans SC5314]
 gi|46441686|gb|EAL00981.1| hypothetical protein CaO19.6749 [Candida albicans SC5314]
 gi|238881122|gb|EEQ44760.1| lysyl-tRNA synthetase [Candida albicans WO-1]
          Length = 594

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 123/274 (44%), Gaps = 26/274 (9%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVAN----PDS 56
           H  R  +  D+ VS       +SG +   R  G  +   +    G+  Q++A     P  
Sbjct: 114 HLQRGETLKDVTVS-------VSGRIMTKRESGSKLKFYVLKGDGVEVQIMAQAQDAPSV 166

Query: 57  ACFE-IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPV 114
             FE + + +R   ++ + G       +T  A    G++ + A K+++L+     LP   
Sbjct: 167 EAFESMHEILRRGDIIGVTGY----PGKTAPAKGGEGELSVFATKVQLLTPCLHMLPTEH 222

Query: 115 FGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
           +G ++  +  R++ R+LDL   D+  +    R++II  +R  +   +F+E  TPIL   +
Sbjct: 223 YGFKD--QEARYRKRYLDLIMNDSSRERFRVRSKIIQYIRKFLDNRDFVEVETPILNVIA 280

Query: 173 SPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
               A+ F    + +N   F  +  AP+ + + L+  G DR ++I   FR+E       P
Sbjct: 281 GGATAKPFTTHHNDLNMEMFMRI--APELFLKELVVGGMDRVYEIGRQFRNEGIDMTHNP 338

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
            EF   +   ++ +  D+++  E +   + +E +
Sbjct: 339 -EFTTCEFYQAYADVYDLMDMTELMFSEMVKEIT 371



 Score = 42.0 bits (97), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  +  +REV LFP
Sbjct: 540 ALEYGLPPTAGWGCGIDRLAMFLTDSNTIREVLLFP 575


>gi|330443849|ref|YP_004376835.1| lysyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328806959|gb|AEB41132.1| lysyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 521

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 4/151 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           + +R++ R+LDL       N+ V+R+RII  +R  M ++ ++E  TPIL +      AR 
Sbjct: 170 KEVRYRKRWLDLICSQEVSNVFVQRSRIIKLIREYMDSQGYLEVETPILQSIYGGAEARP 229

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           +         K++L+  G  + ++I   FR+E       P EF  ++ 
Sbjct: 230 FTTELEALHTEMFLRISLEIALKKILVG-GAPKIYEIGKVFRNEGIDRTHNP-EFTMIEA 287

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
             ++++   ++  +EN++  V    ++G+TV
Sbjct: 288 YTAYMDYHGVMEFVENLVEYVVRSLNHGSTV 318



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 17/33 (51%), Positives = 24/33 (72%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP GG   GIDR+VM+L  + ++R+V  FP+
Sbjct: 484 GMPPSGGFGIGIDRLVMILTDSASIRDVLYFPV 516


>gi|322689860|ref|YP_004209594.1| lysyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
 gi|320461196|dbj|BAJ71816.1| lysyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
          Length = 560

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 6/161 (3%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I S A + PLP    ++  E  R +  ++ +  D   +N+V+ R++ +
Sbjct: 182 TGELSVFATEWAIASKALQ-PLPAL-HKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAV 239

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R      +F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 240 ASLRRTFDDHDFLEVETPMLQTLHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 298

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           G DR F+I   FR+E   +   P EF  ++   ++   D I
Sbjct: 299 GIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYGTYDSI 338



 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 468 KWDLYVRGFELATG--YSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 526 PAGGMGMGIDRLLIALTGA-TIRETITFPL 554


>gi|326202576|ref|ZP_08192444.1| asparaginyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325987160|gb|EGD47988.1| asparaginyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 464

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 74/330 (22%), Positives = 119/330 (36%), Gaps = 66/330 (20%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVAN-------PDSACFEIAKSVRS 67
           +G  + + GWV  VR      F+++ D   +   Q+V          + A   +  S+  
Sbjct: 17  IGKTITVPGWVKTVRDSKTFGFIELNDGTFFRNLQIVFEEGKLENFKEVAKLSVGSSIEV 76

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           E +L           ET NA       EL A +I I    E L    +  ++   S  F 
Sbjct: 77  EGILV----------ETPNAK---QPFELKANRISI----ENLCPADYQLQKKRHSFEFL 119

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGA-------- 177
                LR  T   + V R R + +       +   F+   TP++T S  EGA        
Sbjct: 120 RTISHLRPRTNTFSAVFRVRSLAAFAIHKFFQERGFVYVHTPLITGSDCEGAGQMFRVTT 179

Query: 178 RDFLVPSRVNQGS------FYALPQAPQQYKQLL---MASGFDRYFQIAPCFRDEDPRSD 228
            D   P R   G       F+    +     QL     A  F   +   P FR E+  + 
Sbjct: 180 LDMKNPPRTENGDIDYSQDFFEKETSLTVSGQLTGEAYAMAFKNIYTFGPTFRAENSNTA 239

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG----------- 267
           R   EF+ ++ E++F +  D +   E++L+ V            +F N            
Sbjct: 240 RHAAEFWMIEPEIAFSDLKDDMMLAEDMLKYVINYVVENAPEEMQFFNSFVDKGLLERLD 299

Query: 268 NTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           N V+++F  I Y +AI     +K     P+
Sbjct: 300 NVVNSDFAHITYTEAIEILKKNKDKFEYPV 329



 Score = 38.5 bits (88), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 15/95 (15%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  EI  G  R    +++ +   ++G+SKE  +      ++GG           H
Sbjct: 379 DLLVPGVGEIIGGSQREERLDILEKKMDDMGLSKEDYQWYLDLRKYGG---------TKH 429

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G   G +R +M L G  N+R+V  F  +   C+ 
Sbjct: 430 AGFGLGFERAIMYLTGITNIRDVIPFARTTGSCEF 464


>gi|226737250|sp|Q4A5F3|SYK_MYCS5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|144575195|gb|AAZ44018.2| lysyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 491

 Score = 46.2 bits (108), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 26/40 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GG   GIDR+VML    +++R+V  FP  +N
Sbjct: 447 ALKYGMPPAGGCGIGIDRLVMLFTEKESIRDVLFFPTLKN 486



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 55/279 (19%), Positives = 117/279 (41%), Gaps = 41/279 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-----SACFEIAKSVRSE 68
            S  G F+ +  +  +++     ++ + ++H  + ++V+N D      A  +++K+   E
Sbjct: 68  TSQRGPFIVIKDYFDKIQ-----LYFNKKEHLDLAELVSNLDLGDIIHAHGKLSKTNTGE 122

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ I  L            ++T  ++    K   LS  EE+               +++
Sbjct: 123 LVVKIKTL-----------KLLTKVLKPLPDKFHGLSDIEEI---------------YRH 156

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRV 186
           R+LDL  +     + K R++II+ +R    +  ++E  TP L+   S   A+ F      
Sbjct: 157 RYLDLISNEHSMEVFKKRSKIISLIRKYFDSNMYLEVETPFLSNYISGAAAKPFKTFHNA 216

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
               F          K+LL+  G DR +++   FR+E   +   P EF  ++   ++   
Sbjct: 217 LSQEFTLRIATEIPLKKLLIG-GIDRVYEMGRIFRNEGIDTTHNP-EFTTIEFYEAYSNL 274

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           + ++   E + + + +E  N  T+ N    I  ++  +R
Sbjct: 275 EKMMQRTEELFKLIAKEL-NLKTLQNKGEEINLEEPFKR 312


>gi|288870132|ref|ZP_06113061.2| asparagine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288868250|gb|EFD00549.1| asparagine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 497

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 30/260 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDG-LV 77
           + + GWV  +R      F+ + D  ++   QVV +     F     +     L I G LV
Sbjct: 55  ISVGGWVRSLRDSKAFGFIVLSDGTYFETLQVVYHDTMDNFSEISRLSVGTALIIKGTLV 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A +I ++  A     P+  +R   E +R     L  R +T
Sbjct: 115 ATPEAKQ--------PFEIQATEI-VIEGASSPDYPLQKKRHSFEYLR-TISHLRPRTNT 164

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPS-------RVNQG 189
                  R+ I  ++       +F+   TP++T S  EGA + F V +       + ++G
Sbjct: 165 FQAVFRVRSLIAYAIHQFFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDLNDIPKTDEG 224

Query: 190 S------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+  P       QL     A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 225 KVDFSQDFFCKPTNLTVSGQLNAETYAMAFRNVYTFGPTFRAENSNTTRHAAEFWMIEPE 284

Query: 241 MSFVEQDDILNTMENVLRGV 260
           M+F + +D +   E++L+ V
Sbjct: 285 MAFADLNDDMELAESMLKYV 304



 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + +      +G+ KE  + +F    R +  G   H G   G +R VM 
Sbjct: 420 EIIGGSQREDDYDKLTARMDELGLKKE--DYQFYLDLRKY--GSTRHAGFGLGFERCVMY 475

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 476 LTGMSNIRDVVPFPRTVNNCEL 497


>gi|240144533|ref|ZP_04743134.1| asparagine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257203443|gb|EEV01728.1| asparagine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291538061|emb|CBL11172.1| asparaginyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 463

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 106/274 (38%), Gaps = 50/274 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V   V + GWV  +R      F           +V N D   FE  + V S  +   D +
Sbjct: 17  VDQTVTIGGWVRSIRNSKNFGF-----------IVVN-DGTFFEPVQVVYSNVLENFDDV 64

Query: 77  VMSRSAETIN---ANIITGQI----------ELSAQKIEILSVAEELPLPVFGEREYPES 123
                 E +N   A I+TG++          E+ A++IEI  V+     P+  ++   E 
Sbjct: 65  ------EKLNVGAAIIVTGKLVATPGTKQPFEIQAEQIEIEGVSTP-DYPLQKKKHSFEY 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R     L  R +T       R+ I  ++       +F+   TP++T S  EGA +    
Sbjct: 118 LR-TISHLRPRTNTFEAVFRVRSLIAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQV 176

Query: 184 SRVNQGSFYALPQAPQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPR 226
           + ++  +    P     Y +                    A  F   +   P FR E+  
Sbjct: 177 TTLDMNNLPKNPDGTVDYSKDFFNKPTNLTVSGQLNGETYAMAFKNIYTFGPTFRAENSN 236

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           + R   EF+ ++ E++F + +D +   E++L+ +
Sbjct: 237 TTRHAAEFWMIEPEIAFADLEDDMILAESMLKYI 270



 Score = 40.4 bits (93), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + +L   + +G+ +E  + +F    R +  G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDYDKLLARINELGLKEE--DYQFYLDLRKY--GSARHAGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMSNIRDVIPFPRTVNNCEL 463


>gi|283458954|ref|YP_003363602.1| lysyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283135017|dbj|BAI65782.1| lysyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 1116

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 479  AFQYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV NG E+             R  ++E  L+A S    + EV E+       A +
Sbjct: 1022 AERWDLVINGMEMGCAYSELADPLVQRERLTEQSLKAASGDLEAMEVDED----FLYALE 1077

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             GMPP GG+  G+DR+VM LL    +R V  FP
Sbjct: 1078 TGMPPTGGLGLGVDRLVM-LLAQTQIRGVLSFP 1109



 Score = 46.2 bits (108), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 106/249 (42%), Gaps = 34/249 (13%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           +SG V  +R H G++F+ + +     QVV         + +S+  E +L +    +    
Sbjct: 678 VSGRVRALRKHSGVLFITLVEGTKTLQVV---------MERSLVGERLLNLAAHALD--- 725

Query: 83  ETINANIITGQIELSAQKIEILSVAEEL---------PLPVFGEREYPESIRFKYRFLDL 133
                +IIT Q    A +    S+             P+P F     PE+ R + R  DL
Sbjct: 726 ---TGDIITVQGTYGASRNGTESLIASTWHMASKSLHPIP-FDSFTDPEA-RLRRRSTDL 780

Query: 134 --RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQ-G 189
               D + +N+  RT +I ++R R+  E F+E  TPIL T      AR F   + +N  G
Sbjct: 781 LVHPDQM-QNLRLRTAVIKALRARLDTEGFLEVETPILHTVHGGASARPFR--TYINAYG 837

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  AP+ Y + L+  G    +++   FR+E   +   P EF  L+    + +   +
Sbjct: 838 EDLTLRIAPELYLKRLVVGGSGPVYELGRDFRNEGADATHNP-EFTVLEAYRPYADYVQM 896

Query: 250 LNTMENVLR 258
               E +L+
Sbjct: 897 RELTECLLK 905


>gi|39996852|ref|NP_952803.1| lysyl-tRNA synthetase-related protein [Geobacter sulfurreducens
           PCA]
 gi|39983740|gb|AAR35130.1| lysyl-tRNA synthetase-related protein [Geobacter sulfurreducens
           PCA]
 gi|298505866|gb|ADI84589.1| lysine adenylyltransferase [Geobacter sulfurreducens KN400]
          Length = 307

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 8/128 (6%)

Query: 145 RTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
           R RI+  +R   +   ++E  TP+ + A +PE   D  VPS    G ++ L  +P+   +
Sbjct: 17  RARILAEIRRFFVEGGYLEVETPLRIPAPAPESHID-PVPS----GPWF-LQTSPELCMK 70

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            L+A+G++R FQI+ C+RD +  +  LP EF  L+   +  +   ++N  E ++  V   
Sbjct: 71  RLVAAGYERVFQISRCWRDGERGNMHLP-EFTMLEWYRAGTDYRGLMNECEELVGAVAAA 129

Query: 264 FSNGNTVS 271
              G  ++
Sbjct: 130 LGMGEVLN 137


>gi|325675034|ref|ZP_08154721.1| lysine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325554620|gb|EGD24295.1| lysine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 506

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 115/268 (42%), Gaps = 22/268 (8%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  ++          S  G  V + G V  VR  G + F  +++  G TQ+ A    
Sbjct: 43  RTHSLAEIRAKYPDLEPDSSTGEQVGVVGRVIFVRNTGKLCFATLQEGDG-TQLQAMLSL 101

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPV 114
           A   + +   + W   +D G  +    E I++    G++ + A   ++   A+ L P+PV
Sbjct: 102 A--NVGEDALAAWKSDVDLGDFVFVHGEVISSR--RGELSVMADTWQM--AAKSLRPMPV 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
              +E  E  R + R+ DL  R        KR  ++  +R  +    F+E  TP+L T  
Sbjct: 156 -AHKEMSEESRVRQRYADLIIRPEARDMARKRVAVVRELRNALERRGFLEVETPMLQTLH 214

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+  S       Y L  AP+ + +  +  G ++ F+I   FR+E   S   P 
Sbjct: 215 GGAAARPFVTHSNALDIDLY-LRIAPELFLKRCVVGGIEKVFEINRNFRNEGVDSTHSP- 272

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGV 260
           EF  L+   ++   DD    +  +++ V
Sbjct: 273 EFAMLETYEAYGTYDDSAKMIRELVQEV 300



 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 13/92 (14%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQA--------FSNVGISKEVVENRFGGLYRAFQCG 532
           ++DL   GFE+A+G   + + + ++Q          ++ G  + +V +       A + G
Sbjct: 414 KWDLYVRGFELATG--YSELVDPIIQRERFMDQARLASAGDDEAMVLDE--EFLAAMEQG 469

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           MPP  G   GIDR++M L G   +RE  LFP+
Sbjct: 470 MPPTTGTGMGIDRLLMALTGL-GIRETILFPI 500


>gi|71894621|ref|YP_278729.1| lysyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 493

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 26/40 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GG   GIDR+VML    +++R+V  FP  +N
Sbjct: 449 ALKYGMPPAGGCGIGIDRLVMLFTEKESIRDVLFFPTLKN 488



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 55/279 (19%), Positives = 117/279 (41%), Gaps = 41/279 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-----SACFEIAKSVRSE 68
            S  G F+ +  +  +++     ++ + ++H  + ++V+N D      A  +++K+   E
Sbjct: 70  TSQRGPFIVIKDYFDKIQ-----LYFNKKEHLDLAELVSNLDLGDIIHAHGKLSKTNTGE 124

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ I  L            ++T  ++    K   LS  EE+               +++
Sbjct: 125 LVVKIKTL-----------KLLTKVLKPLPDKFHGLSDIEEI---------------YRH 158

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRV 186
           R+LDL  +     + K R++II+ +R    +  ++E  TP L+   S   A+ F      
Sbjct: 159 RYLDLISNEHSMEVFKKRSKIISLIRKYFDSNMYLEVETPFLSNYISGAAAKPFKTFHNA 218

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
               F          K+LL+  G DR +++   FR+E   +   P EF  ++   ++   
Sbjct: 219 LSQEFTLRIATEIPLKKLLIG-GIDRVYEMGRIFRNEGIDTTHNP-EFTTIEFYEAYSNL 276

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           + ++   E + + + +E  N  T+ N    I  ++  +R
Sbjct: 277 EKMMQRTEELFKLIAKEL-NLKTLQNKGEEINLEEPFKR 314


>gi|189200501|ref|XP_001936587.1| asparaginyl-tRNA synthetase [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187983686|gb|EDU49174.1| asparaginyl-tRNA synthetase [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 601

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 114/276 (41%), Gaps = 47/276 (17%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-----IAKSVRSEWVLC 72
           G  + ++G+V  VR    I F  I D   +  V A  D +  E     +A +V  +W   
Sbjct: 60  GETLTINGYVRTVRKQKRIAFAAIGDGSTLQTVQAVLDPSLAEGLSTGVAVTVTGKWTPS 119

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G   S   +  N  I+      +A+K +       LP            +R +  F  
Sbjct: 120 -PGQGQSHELQVNNVRILGDND--AAKKYQTAEFLRTLP-----------HLRSRLPFNS 165

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFL--------VP 183
           L        I++   ++ +   +  A+ +F++C  PI+T+S  EGA +          VP
Sbjct: 166 L--------ILRLRSLVTAEVTKYFAKHDFVQCHPPIITSSDCEGAGEVFTVAPGAPAVP 217

Query: 184 -------SRVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                  ++ ++  F+  P+      QL    +A   ++ + ++P FR E   + R   E
Sbjct: 218 DKQLSNQAKQHEDQFFGSPKYLTVSSQLHLEALAQSVNKVWALSPTFRAEKSDTARHLSE 277

Query: 234 FYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGN 268
           FY L+ E++F    + +++ +E++LR V  E    +
Sbjct: 278 FYMLEAELAFVNNVNVVMDVVEDMLRSVASELQTSS 313


>gi|261210976|ref|ZP_05925266.1| asparaginyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260839951|gb|EEX66551.1| asparaginyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 466

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 120/317 (37%), Gaps = 65/317 (20%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL I D             +CF   ++V    +   D 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAIYD------------GSCFNPIQAVVPNNLNNYDN 63

Query: 76  LVMSRSAE-------TINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
            V+  +         TI  +  +GQ  EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGTIVESPASGQAFELAATAVKVVGWVEDADTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y Q        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT-------- 269
            R   EF+ ++ E++F + + +    E++L+ VF+          EF N           
Sbjct: 241 SRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARL 300

Query: 270 ---VSNNFLRICYDDAI 283
              V ++F ++ Y DAI
Sbjct: 301 EQFVDSDFAQVDYTDAI 317


>gi|156305178|ref|XP_001617534.1| hypothetical protein NEMVEDRAFT_v1g226003 [Nematostella vectensis]
 gi|156194390|gb|EDO25434.1| predicted protein [Nematostella vectensis]
          Length = 267

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 9/133 (6%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           PLP   +      +R++ R++DL  +   + + + R +I+  +R  +    F+E  TP+L
Sbjct: 136 PLPDKHKGLQDTEMRYRQRYVDLITNEQSRKVFEARVKIVAGIRKYLADRRFMEVETPML 195

Query: 170 TASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
               P GA  R F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   +
Sbjct: 196 QVI-PGGASARPFITHHNALDRDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLST 253

Query: 228 DRLPG----EFYQ 236
              P     EFYQ
Sbjct: 254 RHNPEFTMIEFYQ 266


>gi|302799647|ref|XP_002981582.1| hypothetical protein SELMODRAFT_154531 [Selaginella moellendorffii]
 gi|300150748|gb|EFJ17397.1| hypothetical protein SELMODRAFT_154531 [Selaginella moellendorffii]
          Length = 507

 Score = 46.2 bits (108), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 117/266 (43%), Gaps = 23/266 (8%)

Query: 5   RTHSCGDL----------GVSDVGS-FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RTH    L          GV+D     V ++G +   R  G + FL IRD     Q+   
Sbjct: 15  RTHKATQLQEKYADLPAGGVADSDEDRVSVAGRIFARRAFGKLAFLGIRDDSASIQLYC- 73

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D A  E    ++S   + I  +V    A         G++ +    + IL+ +  LPLP
Sbjct: 74  -DKAKLESFTQLKS--TVDIGDIV---GATGTLKRTEKGELSVYVDNLVILTKSI-LPLP 126

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-A 171
                      R++ R+LD+  +     + + R ++++++R  +    F+E  TPIL  A
Sbjct: 127 EKWHGLTDIEKRYRQRYLDMIMNPEVAGVFRARAKVVSAIRRFVEDLGFLEIETPILQGA 186

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F+      +   + L  A + + + ++  GF+R +++   FR+E   +   P
Sbjct: 187 AGGADARPFITHHNSLERDLF-LRIATELHLKRMLVGGFERVYELGRIFRNEGISTRHNP 245

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVL 257
            EF  +++  ++ + +D++   E ++
Sbjct: 246 -EFTSIEIYQAYADYNDMMALAEELV 270



 Score = 43.9 bits (102), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 466 ALEYGMPPTAGMGIGIDRLVMLLTDSPSIRDVIAFPV 502


>gi|261367260|ref|ZP_05980143.1| asparagine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282570862|gb|EFB76397.1| asparagine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 461

 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 131/359 (36%), Gaps = 76/359 (21%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSAC--FEIAKSVRSEWVLCI 73
           G+ V + GW   VR    I F+ + D   Y   Q+V   D      EIAK          
Sbjct: 17  GTKVTVCGWAKTVRDSKNIGFISLSDGSCYKPVQIVFQADKLANYAEIAKCGLYTSFEVT 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             LV++ +A+           E++A  I +L              EYP  ++ K   +D 
Sbjct: 77  GTLVLTPNAKQ--------PFEINADAITVLGPCGP---------EYP--LQKKKMGMDY 117

Query: 134 RRDTLHKNIVKRTRIINS-MRCRMIA----------ENFIECSTPILTASSPEGARD-FL 181
            R   H  +  RT   N+  R R  A            F    TPI T S  EGA + F 
Sbjct: 118 LRTMTH--LRPRTNTFNAAFRVRGQAAFAIHQFFHERGFTYVHTPIFTGSDCEGAGEMFQ 175

Query: 182 VPS-------RVNQGS------FYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           V +       R   G+      F+  P       Q +   MA      +   P FR E  
Sbjct: 176 VTTMDLNDIPRTEDGAVDYTKDFFKRPVNLTVSGQLEAEAMAMALGNVYTFGPTFRAEKS 235

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSNGNTV- 270
              R   EF+ ++ EM+F + +  ++T E + + V              F +F +   + 
Sbjct: 236 YDTRHAAEFWMIEPEMAFADLNTYMDTAEAMTKYVIRYLLDNCPDELAFFNQFFDKGLIE 295

Query: 271 ------SNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVN 321
                 +++F R+ Y DAI     +  + +  +   M   TEH  +   ++F K + V 
Sbjct: 296 RLELVANSDFARVSYTDAIELLKQNDANFQYKVSWGMDLQTEHERYLTEQIFKKPVFVT 354


>gi|330721813|gb|EGG99790.1| Lysyl-tRNA synthetase-related protein [gamma proteobacterium
           IMCC2047]
          Length = 103

 Score = 46.2 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 14/94 (14%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---------AF 529
           A +++L   G E+A+G      ++  LQ F       ++ E +  GL           A 
Sbjct: 11  AQRFELYVEGVELANGYYELTDADEQLQRFM-----ADLDERKRRGLVTLPADQKLLAAL 65

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           Q GMP   G+A G+DR++ML+ GA ++R+V  FP
Sbjct: 66  QSGMPDCAGVALGLDRLLMLMAGADSIRDVITFP 99


>gi|255322433|ref|ZP_05363578.1| lysyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300341|gb|EET79613.1| lysyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 501

 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 112/283 (39%), Gaps = 23/283 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSVRSEWVLCID 74
           G  V L+G V  +R  G  IF +I D  G  Q+       D   F++ K       + + 
Sbjct: 56  GQLVSLAGRVKLIRDAGKAIFANIEDEDGNLQIYFSNKTLDPNWFKVVKKN-----IEVG 110

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            ++  R    +     TG+  +   ++ + S A   PLP           R++ R+LD+ 
Sbjct: 111 DIIYVRGYAFVTR---TGEFSMHVSELTLASKAIS-PLPEKFHGLTDIETRYRQRYLDMI 166

Query: 135 RD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +  +  +  +R+ I++++R     + F+E  TP++            V      G    
Sbjct: 167 MNPEVRADFKRRSVIVSTIRRFFEDKGFLEVETPMMHPIPGGANAKPFVTFHNALGVERF 226

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GFD  +++   FR+E       P EF  ++   ++    D++   
Sbjct: 227 LRIAPELYLKRLIVGGFDAVYEMNRNFRNEGMDLTHNP-EFTSIEFYWAWHTYHDLMGLT 285

Query: 254 ENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
           E +   + ++      +         S  F RI Y  A+   G
Sbjct: 286 EELFNVLLDKLDMPKIIEFDGMQIDFSKPFKRISYKKALVEIG 328



 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA    MPP  G   GIDR+VMLL   K++R+V LFP
Sbjct: 453 RALGYAMPPTAGQGIGIDRLVMLLTNKKSIRDVVLFP 489


>gi|302187869|ref|ZP_07264542.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 87

 Score = 46.2 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 45  RALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFP 81


>gi|266631457|emb|CBA11568.1| asparaginyl-tRNA synthetase-like [Streptomyces lydicus]
          Length = 326

 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 4/119 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           + +I+++ R  + A  F+E   P++  ++  G R          G  Y L  +   YKQ 
Sbjct: 24  QQQIVSAARDHLRALGFVELLPPVIGPATDPGGRGAKQVDVDYYGHRYKLMTSAIMYKQA 83

Query: 205 LMASGFDRYFQIAPCFRDEDPRS---DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            + S FD+ F +AP  R E P +    R   EF+Q D+E++     D +   E+++R  
Sbjct: 84  ALLS-FDKIFCVAPNVRLEPPETCSTQRHLAEFHQFDVEIAGAGAQDAMGVAEDLVRAA 141


>gi|225387011|ref|ZP_03756775.1| hypothetical protein CLOSTASPAR_00761 [Clostridium asparagiforme
           DSM 15981]
 gi|225047023|gb|EEG57269.1| hypothetical protein CLOSTASPAR_00761 [Clostridium asparagiforme
           DSM 15981]
          Length = 463

 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 65/305 (21%), Positives = 115/305 (37%), Gaps = 51/305 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           + + GW+  +R      F+ + D  ++   QVV + +   F EI K      V+    LV
Sbjct: 21  ITIGGWIRSLRDSKAFGFIVVSDGSYFEPLQVVYHDNLTNFAEINKLNVGTAVIVTGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+         +I+ +   +E  S  +    P+  +R   E +R     L  R +T
Sbjct: 81  ATPQAKQ------PFEIQATGVVVEGTSAPD---YPLQKKRHSFEYLR-TISHLRPRTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---------- 187
                  R+ I  ++        F+   TP++T S  EGA +    + ++          
Sbjct: 131 FQAVFRVRSLIAYAIHQYFQDRGFVYVHTPLITGSDCEGAGEMFQVTTMDLNDIPKTEDG 190

Query: 188 ----QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+  P       QL     A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 191 KVDFSQDFFGKPTNLTVSGQLNVETYAMAFRNVYTFGPTFRAENSNTPRHAAEFWMIEPE 250

Query: 241 MSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNFLRICY 279
           M+F + DD +   E +L+ V              F +F +        N + + F  I Y
Sbjct: 251 MAFADLDDNMCLAEGLLKYVIRYVLENAPAEMNFFNQFVDKGLLDRLKNVLESEFGHITY 310

Query: 280 DDAIR 284
            DA++
Sbjct: 311 TDAVK 315



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + ++     +G+ KE  +  F    R +  G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDYDTLVARMDELGLKKE--DYDFYLDLRKY--GSNRHAGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMTNIRDVIPFPRTVNNCEL 463


>gi|305665273|ref|YP_003861560.1| asparaginyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88710028|gb|EAR02260.1| asparaginyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 477

 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 53/260 (20%), Positives = 106/260 (40%), Gaps = 32/260 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V ++GWV   R +    F+ + D   I   Q V + ++   E+ K + +   L I G+++
Sbjct: 19  VVVNGWVKTFRSNR---FIALNDGSTINNIQCVVDFENLEEEVLKQINTGAALKISGILV 75

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                        GQ +E+    I++   A+    P+  ++   E +R K   L +R +T
Sbjct: 76  ESQGR--------GQSVEIQVNDIQVHGGADPEAYPIQPKKHSLEFLREKAH-LRVRTNT 126

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R+ +  ++       +F     PI+T S  EGA +    + ++  +     + 
Sbjct: 127 FAAVMRVRSALAFAIHQYFRQNDFYYFHAPIVTGSDAEGAGEMFRVTTLDSKNPPLNEEG 186

Query: 198 PQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              YK+                    A G  + +   P FR E+  + R   EF+ ++ E
Sbjct: 187 EVNYKEDFFGKETNLTVSGQLEAEAYAMGLGKVYTFGPTFRAENSNTSRHLAEFWMVEPE 246

Query: 241 MSFVEQDDILNTMENVLRGV 260
           M+F + D  ++  E+ ++ V
Sbjct: 247 MAFYDLDANMDLAEDFIKNV 266


>gi|302308332|ref|NP_985218.2| AER362Wp [Ashbya gossypii ATCC 10895]
 gi|299789404|gb|AAS53042.2| AER362Wp [Ashbya gossypii ATCC 10895]
          Length = 525

 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 52/246 (21%), Positives = 105/246 (42%), Gaps = 18/246 (7%)

Query: 23  LSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           ++G +  +R  G  + F+D++      Q++ N       + ++   +     D +   R 
Sbjct: 81  INGQIRGIRVVGRSMCFVDLQQQGSALQLIVN-----HSLVRAQVGDKAAFQDAIAGLRP 135

Query: 82  AETINANIITG------QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            + + A    G       + L  +++  +  A ++ +P   +R      R + R LD   
Sbjct: 136 GDHVQATGFPGLSKTERTLSLKCREVPRMLAAAQIAIP---QRLTDRVKRQQNRTLDYLV 192

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
           + L K +  R + + ++R  +    F+E  TP+L+A SS   A  F+   R        L
Sbjct: 193 NGL-KVLEFRHKALTALRAYLNRRGFLEVETPMLSAKSSGANATPFVTHLRGQDKQALEL 251

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ + + L   G  R ++I   FR+E   +   P EF  L++   +   D++L   +
Sbjct: 252 RIAPELWLKRLCVGGAQRVYEIGKVFRNEGIDATHNP-EFTTLELYQCYAPLDELLELAQ 310

Query: 255 NVLRGV 260
            +LR +
Sbjct: 311 VLLRDI 316



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 22/35 (62%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           A + GMPP GG+  GIDR+ MLLL    + EV  F
Sbjct: 482 AMKYGMPPIGGLGLGIDRLCMLLLAKARIEEVLPF 516


>gi|303283380|ref|XP_003060981.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457332|gb|EEH54631.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 645

 Score = 46.2 bits (108), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE 68
           D GVS +G  V L GWV  VR    + F+++ D   ++  Q V   D+   E        
Sbjct: 101 DGGVSRIGDAVELRGWVRTVRAQKDLSFVEVNDGSSLSGIQAVVTADATGAE-------- 152

Query: 69  WVLCIDGLVMSRSAETINANIITG-----QIELSAQKIEILSVAEELPLPVFGEREYPES 123
             L  DG + + +A  ++  ++        +E+ A  +E++  A+    P+  +R   E 
Sbjct: 153 --LLADGAITTGAAVVVHGVVVESPGGKQAVEVKATAVELVGGADASTFPLQKKRHTLEF 210

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           +R     L  R +T+      R ++  +      +  F   +TPI+TAS  EGA
Sbjct: 211 LR-GIAHLRPRTNTIGAVTRVRNQLAYATHTFFQSHGFQYVNTPIITASDCEGA 263


>gi|327299364|ref|XP_003234375.1| asparaginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326463269|gb|EGD88722.1| asparaginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 580

 Score = 46.2 bits (108), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 100/231 (43%), Gaps = 13/231 (5%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           +IFL + D YG+ Q V   D      A ++  E  + I G + +   +    +      E
Sbjct: 173 MIFLTLTDGYGLLQCVFTGDLTKTYDAMTLTLETSMAIHGEMRAVPVKQHAPD----NRE 228

Query: 96  LSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
           L A   +++  A    E +   V  + + P+++    R L LR +T    +  R  ++ +
Sbjct: 229 LHADFFQVIGRAAGDKEAITTRVAADAD-PQTL-LDNRHLVLRGETSSSVLKVRAAVVRA 286

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
            R     +  +E + P +  +  EG           + ++  L Q+ Q Y +  +AS  D
Sbjct: 287 FRKTFEQKQMLEVTPPAMVQTQVEGGSTLFEFDYYGEKAY--LTQSSQLYLETCLASLGD 344

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             F I P FR E   + R   E+  ++ E+ F+  +D+L+ +E ++  V +
Sbjct: 345 -VFCICPSFRAEKSLTRRHLSEYTHIESELDFITFNDLLDHIEEIICSVID 394


>gi|312138065|ref|YP_004005401.1| lysyl-tRNA ligase lyss [Rhodococcus equi 103S]
 gi|311887404|emb|CBH46716.1| lysyl-tRNA ligase LysS [Rhodococcus equi 103S]
          Length = 503

 Score = 46.2 bits (108), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 115/268 (42%), Gaps = 22/268 (8%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  ++          S  G  V + G V  VR  G + F  +++  G TQ+ A    
Sbjct: 40  RTHSLAEIRAKYPDLEPDSSTGEQVGVVGRVIFVRNTGKLCFATLQEGDG-TQLQAMLSL 98

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPV 114
           A   + +   + W   +D G  +    E I++    G++ + A   ++   A+ L P+PV
Sbjct: 99  A--NVGEDALAAWKSDVDLGDFVFVHGEVISSR--RGELSVMADTWQM--AAKSLRPMPV 152

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
              +E  E  R + R+ DL  R        KR  ++  +R  +    F+E  TP+L T  
Sbjct: 153 -AHKEMSEESRVRQRYADLIIRPEARDMARKRVAVVRELRNALERRGFLEVETPMLQTLH 211

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+  S       Y L  AP+ + +  +  G ++ F+I   FR+E   S   P 
Sbjct: 212 GGAAARPFVTHSNALDIDLY-LRIAPELFLKRCVVGGIEKVFEINRNFRNEGVDSTHSP- 269

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGV 260
           EF  L+   ++   DD    +  +++ V
Sbjct: 270 EFAMLETYEAYGTYDDSAKMIRELVQEV 297



 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 13/92 (14%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQA--------FSNVGISKEVVENRFGGLYRAFQCG 532
           ++DL   GFE+A+G   + + + ++Q          ++ G  + +V +       A + G
Sbjct: 411 KWDLYVRGFELATG--YSELVDPIIQRERFMDQARLASAGDDEAMVLDE--EFLAAMEQG 466

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           MPP  G   GIDR++M L G   +RE  LFP+
Sbjct: 467 MPPTTGTGMGIDRLLMALTGL-GIRETILFPI 497


>gi|164424687|ref|XP_958075.2| hypothetical protein NCU06866 [Neurospora crassa OR74A]
 gi|157070619|gb|EAA28839.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 489

 Score = 46.2 bits (108), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 21/184 (11%)

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMR 153
           E+   +++IL  ++    P+  + + PE +R       LR R  ++  +++      +  
Sbjct: 84  EMQVTQVDILGPSDAKTFPIQKKYQTPEYLR---TIPHLRPRTPINAALLRMRSEAVAAL 140

Query: 154 CRMIAEN-FIECSTPILTASSPEGARD-FLVPSRVNQGSFYALPQAPQQY----KQLL-- 205
            R  AEN F +   PILT+S  EGA + F V    N     +      +     K+ L  
Sbjct: 141 TRFFAENHFTQTHPPILTSSDCEGAGEVFTVAPASNVTELSSTEDNKSKMFFRNKKYLTV 200

Query: 206 --------MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENV 256
                   +A      + ++P FR E   + R   EFY L+ EM+FV + D++++  E++
Sbjct: 201 STQLHLEALAQSVGNVWTLSPVFRAEKSDTARHLSEFYMLEAEMNFVNDLDEVMDLAEDM 260

Query: 257 LRGV 260
           +R +
Sbjct: 261 IRNM 264



 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 13/100 (13%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA-------------FQ 530
           LV +  EIA G +R H  E +L+A     I      +   G   A              +
Sbjct: 389 LVPDLCEIAGGSMREHRLEPLLEAMKRHNIVAGEFTSSMDGNAPAGAKTGPLDWYVDLRR 448

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G  PHGG   G DR++  L G + +R++  FP     CD
Sbjct: 449 WGCAPHGGYGIGFDRLLCYLTGVQTIRDMVSFPRWFGRCD 488


>gi|163841924|ref|YP_001626329.1| lysyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162955400|gb|ABY24915.1| lysyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 501

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 13/91 (14%)

Query: 482 YDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           +DL+  G E  +           R  ++E  L+A S    + ++ E+      RA + G 
Sbjct: 408 WDLIIGGMERGTAFSELIDPVIQRERLTEQSLRAASGDPEAMQLDED----FLRALEYGA 463

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP GGI  GIDR+VML  G   +RE  LFP+
Sbjct: 464 PPMGGIGLGIDRLVMLFTGV-GIRESILFPL 493



 Score = 41.2 bits (95), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 14/244 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GL 76
           G  V +SG V  +R  G + F+ +++  G T++      A   + +   ++W   +D G 
Sbjct: 61  GEIVGVSGRVVFIRNTGKLCFVTLQEGSG-TRLQGMLSLA--NVGEQSLADWKALVDLGD 117

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-R 135
            +    E I++    G++ + A   +++S A   PLPV    +  E  R + R++DL  R
Sbjct: 118 HVFLHGEVISSK--RGELSVFADSWQMVSKALR-PLPVL-HADLNEENRVRQRYVDLMVR 173

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ-GSFYA 193
           D   + +  R  I  S+R  + + +++E   P+L        AR F   + +N       
Sbjct: 174 DEARQMVRTRAAITRSVRETLNSLDYVEVEGPVLQLIHGGASARPF--ETHINAFDQKMT 231

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  A + Y +  +  G DR +++   FR+E   S   P EF  L+   ++ +Q  +   M
Sbjct: 232 LRIALELYLKRAVVGGIDRVYEMGRIFRNEGVDSTHSP-EFTMLECYEAYADQFVMAERM 290

Query: 254 ENVL 257
             ++
Sbjct: 291 RQII 294


>gi|296815388|ref|XP_002848031.1| asparaginyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238841056|gb|EEQ30718.1| asparaginyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 580

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 101/231 (43%), Gaps = 13/231 (5%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           +IFL + D YG+ Q V   D      A ++  E  + I G + +   +    +      E
Sbjct: 173 MIFLTLSDGYGLLQCVFTGDLTRTYDAMTLTLETSMAIHGEMRAVPVKQHAPD----NRE 228

Query: 96  LSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
           L A   +++  A    E +   V  + + P+++    R L LR +T    +  R  ++ +
Sbjct: 229 LHADFFQVIGRAAGDKEAITTRVAADAD-PQTL-LDNRHLVLRGETSSSVLKVRAAVVRA 286

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
            R     +  +E + P +  +  EG       +   + ++  L Q+ Q Y +  +AS  D
Sbjct: 287 FRKTFEQKQMLEVTPPAMVQTQVEGGSTLFEFNYYGEKAY--LTQSSQLYLETCLASLGD 344

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             F I P FR E   + R   E+  ++ E+ F+  +D+L+ +E ++  V +
Sbjct: 345 -VFCICPSFRAEKSLTRRHLSEYTHIESELDFITFNDLLDHIEEIICSVID 394


>gi|260944282|ref|XP_002616439.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238850088|gb|EEQ39552.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 590

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 91/184 (49%), Gaps = 9/184 (4%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           G++ + A  +++L+     LP   +G ++  +  R++ R+LDL   D++      R+ II
Sbjct: 198 GEVSVFATAVQLLTPCLHMLPTEHYGFKD--QEARYRKRYLDLIVNDSVRDRFKVRSAII 255

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLLMA 207
           + +R  + + +FIE  TPIL   +    A+ F+   + +N   F  +  AP+ + + L+ 
Sbjct: 256 SYIRKFLDSRDFIEVETPILNVIAGGATAKPFVTHHNDLNMEMFMRI--APELFLKELVV 313

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            G DR ++I   FR+E       P EF   +   ++ +  D+++  E +   + +E +  
Sbjct: 314 GGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTELMFSEMVKEITGD 372

Query: 268 NTVS 271
             V+
Sbjct: 373 YKVT 376



 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  +  +REV LFP
Sbjct: 539 ALEYGLPPTAGWGCGIDRLAMFLTNSNTIREVLLFP 574


>gi|315633844|ref|ZP_07889133.1| lysine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315477094|gb|EFU67837.1| lysine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 323

 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 8/109 (7%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDL----VCNGF-EIASGGIRNHMSEVMLQAFSNVGI 513
           F   Q  +  +   DL   + F++      + NGF E+A    + H  E+  +     G+
Sbjct: 213 FPASQAALAQISSEDLRVAERFEFYYKGLELANGFHELADVREQLHRFELDNRQREKAGL 272

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               ++ R  G   A Q G+P   G+A G+DR++M+ +GA++++EV  F
Sbjct: 273 PVRDIDKRLLG---ALQAGIPDCSGVALGVDRLLMIAMGAESIKEVISF 318



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 61/129 (47%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           KN++ R ++I  +R        +E  TP+L+            + +F+ P      + + 
Sbjct: 14  KNLLDRAKLIAEIRRFFTDRGLLEVETPVLSEFGVTDLHLATFSTEFVSPFGEQSKTLW- 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI   FR+E+  +   P EF  L+      +   ++N +
Sbjct: 73  LSTSPEYHMKRLLAAGSGPIFQIGKVFRNEEAGNRHNP-EFTMLEWYRPHFDMYRLINEV 131

Query: 254 ENVLRGVFE 262
           +++L+ + E
Sbjct: 132 DDLLQQILE 140


>gi|261338209|ref|ZP_05966093.1| lysine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270276855|gb|EFA22709.1| lysine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 574

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 6/170 (3%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I + A + PLP    +E  E  R +  ++ +  D   +N+V+ R++ +
Sbjct: 203 TGELSIFATEWAIAAKALQ-PLPAL-HKELNEDTRTRKPYIGMIADENIRNMVRNRSKAV 260

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           +S+R       F+E  TP+L T      AR F           Y +  AP+ + +  +  
Sbjct: 261 SSLRHTFEEHGFLEVETPMLQTIHGGAAARPFTTHMNAFDLDLY-MRIAPELFLKRCLVG 319

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           G DR F+I   FR+E   +   P EF  ++   ++   D I    + +++
Sbjct: 320 GIDRVFEINRDFRNEGVDATHAP-EFTMVEAYEAYGNYDTIAKLTKELIQ 368



 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K  +               A   GMP
Sbjct: 482 KWDLYVRGFELATG--YSELNDPIVQRERFVEQAKAALAGDEEACDIDEDFLEALGVGMP 539

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 540 PAGGMGMGIDRLLIALTGA-TIRETITFPL 568


>gi|56970503|gb|AAH88466.1| Nars2 protein [Rattus norvegicus]
          Length = 277

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 25/125 (20%)

Query: 185 RVNQGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           +V + +F+ +P       QL   +M+  F + F   P FR E+ +S R   EFY ++ E+
Sbjct: 4   KVPEENFFDVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEV 63

Query: 242 SFVEQ-DDILNTMENVLRGVFEE---------------FSNG------NTVSNNFLRICY 279
           SFVE   D++  ME + +   E                 ++G      + + NNFL I Y
Sbjct: 64  SFVESLQDLMQVMEGLFKATTEMVLSHCPEDVELCHQFIASGQKDRLEHMLKNNFLIISY 123

Query: 280 DDAIR 284
            +AI 
Sbjct: 124 AEAIE 128



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  E+  G +R     V+ Q  +  G++K      +       + G  PHGG   
Sbjct: 193 DLLVPGVGELFGGSLREERYHVLEQRLARSGLTKA-----YQWYLDLRKFGSVPHGGFGM 247

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R +  +LG  N+++V  FP   + C L
Sbjct: 248 GFERYLQCILGVDNIKDVIPFPRFTHSCLL 277


>gi|326474010|gb|EGD98019.1| asparaginyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326478207|gb|EGE02217.1| asparaginyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 580

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 100/231 (43%), Gaps = 13/231 (5%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           +IFL + D YG+ Q V   D      A ++  E  + I G + +   +    +      E
Sbjct: 173 MIFLTLTDGYGLLQCVFTGDLTKTYDAMTLTLETSMAIHGEMRAVPVKQHAPD----NRE 228

Query: 96  LSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
           L A   +++  A    E +   V  + + P+++    R L LR +T    +  R  ++ +
Sbjct: 229 LHADFFQVIGRAAGDKEAITTRVAADAD-PQTL-LDNRHLVLRGETSSSVLKVRAAVVRA 286

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
            R     +  +E + P +  +  EG           + ++  L Q+ Q Y +  +AS  D
Sbjct: 287 FRKTFEQKQMLEVTPPAMVQTQVEGGSTLFEFDYYGEKAY--LTQSSQLYLETCLASLGD 344

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             F I P FR E   + R   E+  ++ E+ F+  +D+L+ +E ++  V +
Sbjct: 345 -VFCICPSFRAEKSLTRRHLSEYTHIESELDFITFNDLLDHIEEIICSVID 394


>gi|311064831|ref|YP_003971557.1| lysyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|310867151|gb|ADP36520.1| LysS Lysyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 533

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 6/161 (3%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I S A + PLP    ++  +  R +  ++ +  D   +N+V+ R++ +
Sbjct: 154 TGELSVFATEWAIASKALQ-PLPAL-HKDLNDDTRTRKPYIGMIADEKVRNMVRNRSKAV 211

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R      +F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 212 ASLRRTFDDHDFLEVETPMLQTIHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 270

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           G DR F+I   FR+E   +   P EF  ++   ++   D I
Sbjct: 271 GIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYGTYDTI 310



 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 9/95 (9%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 440 KWDLYVRGFELATG--YSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 497

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           P GG+  GIDR+++ L GA  +RE   FP+ +   
Sbjct: 498 PAGGMGMGIDRLLIALTGA-TIRETITFPLVKPLA 531


>gi|297808573|ref|XP_002872170.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297318007|gb|EFH48429.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 428

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 12/192 (6%)

Query: 20  FVRLSGWVH--RVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
            V +SGWV   R +  G   FL++ D      +    D+   +++K V +   L +DG +
Sbjct: 32  LVEISGWVKTGREQGKGSFAFLEVNDGSCAANLQVKVDACVSDVSKLVATGTCLTVDGCL 91

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                          +IELSA+K+  +   +    P+   +   E +R    + + R  T
Sbjct: 92  KIPP----EGKATKQKIELSAEKVIDVGTVDPATYPIPKTKLTLEHLR---DYTNFRART 144

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIEC--STPILTASSPEGARD-FLVPSRVNQGSFYAL 194
                V R R   ++   +  +    C   TPI+T S  EGA + F V + +NQ    + 
Sbjct: 145 TTMAAVTRIRRKITLEAHLFCDEHDICHIHTPIITTSDCEGAGEMFQVTTLINQSDDKSP 204

Query: 195 PQAPQQYKQLLM 206
            +A  +  +L++
Sbjct: 205 TEADIEAAKLIV 216


>gi|227486700|ref|ZP_03917016.1| asparagine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235288|gb|EEI85303.1| asparagine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 462

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 101/257 (39%), Gaps = 28/257 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GW+   R    + F+++ D   +   QVV   +   ++          LC++G  +
Sbjct: 18  VTIEGWIRNSRFSKNVGFIELNDGSTFKNLQVVVGKEIENYDELDKQNLSASLCVEGKFV 77

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           +      N N      E+ A K+ +L  + E   P+  +R+  E +R     L  R +T 
Sbjct: 78  ATGN---NKN----PYEIQATKVIVLGESSE-KFPIQKQRQTFEFMR-TIPHLRPRTNTY 128

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV--------PSRVNQG- 189
                 R+ +   +       +F+  + PI+TAS  EGA +           P R   G 
Sbjct: 129 RAVFRLRSILAFGLHKFFQERDFVYVNPPIITASDAEGAGEMFNVTTIDPNDPPRREDGK 188

Query: 190 --------SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                   S  A      Q +    A  F   +   P FR E   + R   EF+ L+ EM
Sbjct: 189 VDYNKDFFSKKAYMTVSGQLEAEDYALAFGNVYTFGPTFRAEVSNTPRHAAEFWMLEPEM 248

Query: 242 SFVEQDDILNTMENVLR 258
           +F + +  ++T E +++
Sbjct: 249 AFADYNVCMDTAEAMIK 265


>gi|262402352|ref|ZP_06078913.1| asparaginyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262351134|gb|EEZ00267.1| asparaginyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 466

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 120/317 (37%), Gaps = 65/317 (20%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL I D             +CF   ++V    +   D 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAIYD------------GSCFNPIQAVVPNNLNNYDN 63

Query: 76  LVMSRSAE-------TINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
            V+  +         TI  +  +GQ  EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGTIVDSPASGQAFELAATAVKVVGWVEDADTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y Q        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT-------- 269
            R   EF+ ++ E++F + + +    E++L+ VF+          EF N           
Sbjct: 241 SRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARL 300

Query: 270 ---VSNNFLRICYDDAI 283
              V ++F ++ Y DAI
Sbjct: 301 EQFVDSDFAQVDYTDAI 317


>gi|294660329|ref|NP_853021.2| asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|298286867|sp|Q7NBM9|SYN_MYCGA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|284811986|gb|AAP56589.2| Asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930499|gb|ADC30438.1| Asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 456

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 104/248 (41%), Gaps = 17/248 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSA--CFEIAKSVRSEWVLCI 73
           G  V L G    +R  G I F+   D   +   Q+V   ++     EI+K   S  +L +
Sbjct: 18  GEQVVLVGSFKSIRSSGAIGFIAFSDSTALEPVQIVFKKENTPNFDEISKLPISSMIL-V 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V +   +           E+ A KI +L  A+    P+  +    E +R +   L +
Sbjct: 77  KGVVRNTPEKK-------QPFEIQASKIVVLKEADP-SYPLQKKAHGSEFLR-ENAHLRV 127

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD---FLVPSRVNQGS 190
           R +  +  +  R+ + N+        +F+    P++T++  EGA +    + P+  N   
Sbjct: 128 RTNKFYVIMKIRSELANAFFEFFKNNDFLYVHAPLITSNDSEGAGESFEVISPNDPNYFG 187

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
             A      Q+     A GF R F   P FR E   + +   EF+ ++ E+S ++ D + 
Sbjct: 188 KKASLTVSGQFAAEAYAQGFKRVFTFGPTFRAEKSHTSKHLSEFWMIEPEVSLMDLDKLT 247

Query: 251 NTMENVLR 258
             +E  ++
Sbjct: 248 ILIEQCVK 255


>gi|227547110|ref|ZP_03977159.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|227212411|gb|EEI80301.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 55813]
          Length = 41

 Score = 45.8 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 18/32 (56%), Positives = 25/32 (78%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GM P GG+  G+DR+VMLL G+ ++R+V LFP
Sbjct: 4   GMAPTGGLGIGVDRLVMLLTGSSSIRDVLLFP 35


>gi|326799815|ref|YP_004317634.1| lysyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326550579|gb|ADZ78964.1| Lysyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 572

 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 13/86 (15%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM--------SQNFCDLLMGSPST 578
           RA + GMPP  GI  GIDR+ ML+    ++++V  FP         + +  D        
Sbjct: 460 RALEYGMPPTSGIGIGIDRLAMLMTNQASIQDVLFFPQMRPEKVIKTASVTDYEAQGIPA 519

Query: 579 VSVEQLRELGLRIVE-----NPKKIL 599
           V V  L+++GL  +E     NP K+ 
Sbjct: 520 VWVPALQKMGLITIESLKAANPNKVF 545


>gi|317482148|ref|ZP_07941171.1| lysyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916382|gb|EFV37781.1| lysyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 560

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 468 KWDLYVRGFELATG--YSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           P GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 526 PAGGMGMGIDRLLIALTGA-TIRETITFPL 554



 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 6/161 (3%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I S A + PLP    ++  E  R +  ++ +  D   +N+ + R++ +
Sbjct: 182 TGELSVFATEWAIASKALQ-PLPAL-HKDLNEDTRTRKPYIGMIADENIRNMARNRSKAV 239

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R      +F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 240 ASLRRTFDDHDFLEVETPMLQTLHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 298

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           G DR F+I   FR+E   +   P EF  ++   ++   D I
Sbjct: 299 GIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYGTYDSI 338


>gi|224283778|ref|ZP_03647100.1| lysyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|310287955|ref|YP_003939214.1| Lysyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|313140932|ref|ZP_07803125.1| lysyl-tRNA synthetase 1 [Bifidobacterium bifidum NCIMB 41171]
 gi|309251892|gb|ADO53640.1| Lysyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|313133442|gb|EFR51059.1| lysyl-tRNA synthetase 1 [Bifidobacterium bifidum NCIMB 41171]
          Length = 563

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 9/95 (9%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG------LYRAFQCGMP 534
           ++DL   GFE+A+G   + +++ ++Q    V  +K+ +               A   GMP
Sbjct: 470 KWDLYVRGFELATG--YSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMP 527

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           P GG+  GIDR+++ L GA  +RE   FP+ +   
Sbjct: 528 PAGGMGMGIDRLLIALTGA-TIRETITFPLVKPLA 561



 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 6/161 (3%)

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           TG++ + A +  I S A + PLP    ++  +  R +  ++ +  D   +N+V+ R++ +
Sbjct: 184 TGELSVFATEWAIASKALQ-PLPAL-HKDLNDDTRTRKPYIGMIADEKVRNMVRNRSKAV 241

Query: 150 NSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            S+R      +F+E  TP+L T      AR F           Y L  AP+ + +  +  
Sbjct: 242 ASLRRTFDDHDFLEVETPMLQTIHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVG 300

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           G DR F+I   FR+E   +   P EF  ++   ++   D I
Sbjct: 301 GIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYGTYDTI 340


>gi|134083170|emb|CAK48622.1| unnamed protein product [Aspergillus niger]
          Length = 509

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 106/262 (40%), Gaps = 43/262 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE----WVLCID 74
           ++L+G++  VR      F +I D   +   Q + NP  A  E++     E    W  C  
Sbjct: 49  IQLNGFIRSVRKQKRFAFAEISDGSTVKPLQAILNPSQAA-ELSTGTAVEISGVWKACPP 107

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G   +               EL A  + I+   +    P+  +   PE +R   +   LR
Sbjct: 108 GKEQTH--------------ELQATSVNIVGKTDPETYPIQKKYHSPEFLR---QIPHLR 150

Query: 135 RDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVN 187
             T   +++ R R      + N  R       F++   P++T+S  EGA + F V  R  
Sbjct: 151 IRTPFNSLLSRFRSECLYQLGNVFR-HAPNGGFVQVHPPLITSSDCEGAGETFTVLPREA 209

Query: 188 QGS-------FYALPQAPQQYKQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            G+       F+  P+      QL +   A+     + ++P FR E   + R   EFY L
Sbjct: 210 VGTTPADGDHFFRAPKYLTVSSQLHLEAYAAELGNVWTMSPMFRAEKSDTPRHLSEFYML 269

Query: 238 DMEMSFVEQDDILNTM-ENVLR 258
           + E +F++  D L  + E +LR
Sbjct: 270 EAEANFMDNLDTLTDLVEYLLR 291


>gi|282890720|ref|ZP_06299240.1| hypothetical protein pah_c026o040 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499313|gb|EFB41612.1| hypothetical protein pah_c026o040 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 521

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP GGI  GIDR+VMLL    ++R+V  FP
Sbjct: 481 AIHQGMPPTGGIGIGIDRLVMLLTNEHSIRDVLYFP 516



 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 7/169 (4%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIIN 150
           G++ + A+++ +L     LPLP        +  R++ R+LDL  +   KN  + RT+I+ 
Sbjct: 144 GELTIFAKRVTLL-CKTLLPLPDKHAGLSDKEQRYRKRWLDLIANEHVKNTFLLRTQILR 202

Query: 151 SMRCRMIAENFIECSTPIL-TASSPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLLMAS 208
            +R  +   +F E  TPIL +      AR FL   + ++Q  F  +   P   K  L+  
Sbjct: 203 FVRKFLDDAHFTEVETPILQSVYGGAEARPFLTKLNALDQEMFMRISLEPSLKK--LIVG 260

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           G DR ++I   FR+E       P EF  ++   S+ +  D++   EN+ 
Sbjct: 261 GIDRVYEIGKVFRNEGIDRSHNP-EFTLMEAYASYWDYKDMMVFCENLF 308


>gi|163751754|ref|ZP_02158972.1| asparaginyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161328406|gb|EDP99565.1| asparaginyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 329

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 21/126 (16%)

Query: 159 ENFIECSTPILTASSPEGARDFLVPS--------RVNQGS------FY---ALPQAPQQY 201
           E FI  STP++TAS  EGA +    S        R ++G       F+   A      Q 
Sbjct: 18  EGFIWVSTPLITASDCEGAGEMFQVSTLDMENLPRTDEGKVDYSEDFFGKEAFLTVSGQL 77

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL---- 257
                A    + +   P FR E+  + R   EF+ ++ E++F + DDI    E +L    
Sbjct: 78  NAETYACALSKVYTFGPTFRAENSNTSRHLAEFWMVEPEVAFADLDDIAALAEQMLKFCF 137

Query: 258 RGVFEE 263
           R V EE
Sbjct: 138 RAVLEE 143


>gi|332704184|ref|ZP_08424272.1| Asparaginyl-tRNA synthetase [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332554333|gb|EGJ51377.1| Asparaginyl-tRNA synthetase [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 460

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 51/260 (19%), Positives = 102/260 (39%), Gaps = 27/260 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV   R   G  FL++ D   +   QV+ +   A     K + +   + + G+++
Sbjct: 19  ITLMGWVRTRRDAKGFSFLELNDGSCLANIQVIVDEGVADAATLKMLNTGSAVKVQGMLV 78

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
               +        GQ  E+ A+ I +   A+    P+  +R   E +R     L  R + 
Sbjct: 79  ESPGK--------GQKWEVKAKAISVFGDADPESFPLQKKRHSDEFLR-TIAHLRPRTNK 129

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---------- 187
                  R+    ++        +    TPI+T +  EGA +    + ++          
Sbjct: 130 FGALFRIRSEAAFAVHDYFRRNGYFYVQTPIITGADCEGAGEMFRVTTLDPSTGKPAAEN 189

Query: 188 --QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +G F+   A      Q    + A    + +   P FR E+  + R   EF+ ++ E++
Sbjct: 190 PFEGDFFGRGAHLTVSGQLSAEVFACSLGKVYTFGPTFRAENSNTPRHAAEFWMIEPEVA 249

Query: 243 FVEQDDILNTMENVLRGVFE 262
           F +  D ++  E+ L+ + +
Sbjct: 250 FADLGDNMDLAEDFLKSLID 269


>gi|317036109|ref|XP_001397625.2| asparaginyl-tRNA synthetase Slm5 [Aspergillus niger CBS 513.88]
          Length = 543

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 106/261 (40%), Gaps = 41/261 (15%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE----WVLCID 74
           ++L+G++  VR      F +I D   +   Q + NP  A  E++     E    W  C  
Sbjct: 49  IQLNGFIRSVRKQKRFAFAEISDGSTVKPLQAILNPSQAA-ELSTGTAVEISGVWKACPP 107

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G   +               EL A  + I+   +    P+  +   PE +R   +   LR
Sbjct: 108 GKEQTH--------------ELQATSVNIVGKTDPETYPIQKKYHSPEFLR---QIPHLR 150

Query: 135 RDTLHKNIVKRTRI-----INSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVNQ 188
             T   +++ R R      + ++        F++   P++T+S  EGA + F V  R   
Sbjct: 151 IRTPFNSLLSRFRSECLYQLGNVFRHAPNGGFVQVHPPLITSSDCEGAGETFTVLPREAV 210

Query: 189 GS-------FYALPQAPQQYKQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           G+       F+  P+      QL +   A+     + ++P FR E   + R   EFY L+
Sbjct: 211 GTTPADGDHFFRAPKYLTVSSQLHLEAYAAELGNVWTMSPMFRAEKSDTPRHLSEFYMLE 270

Query: 239 MEMSFVEQDDILNTM-ENVLR 258
            E +F++  D L  + E +LR
Sbjct: 271 AEANFMDNLDTLTDLVEYLLR 291


>gi|42560629|ref|NP_975080.1| lysyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|81400864|sp|Q6MUG2|SYK_MYCMS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|42492125|emb|CAE76722.1| Lysine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301321327|gb|ADK69970.1| lysine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 500

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 128/289 (44%), Gaps = 19/289 (6%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDS---AC 58
           +Y+ +S  DL ++     V ++G +   R  G    F++I D     Q+    D      
Sbjct: 46  KYKDYSKEDL-LNLNQELVVVAGRIKLYREAGKKAAFVNIDDQDSSIQLYVRLDEIGDQS 104

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE 117
           FE  ++     ++ + G++M             G++ +  +++ +LS A   LP    G 
Sbjct: 105 FEDFRNFDLGDIIGVKGIMMRTDH---------GELSIRCKEVVLLSKALRPLPDKHAGI 155

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
           ++  E  R +Y  L +  D + K    RT+II +++  +  + ++E  TPIL +      
Sbjct: 156 QDIEEKYRRRYVDLIVNHD-VRKTFQARTKIIRTLQNFLDNKGYMEVETPILHSLKGGAS 214

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F+    V     Y L  A + + + L+  GF+  ++I   FR+E   S R   EF  
Sbjct: 215 AKPFITHYNVLNTDVY-LRIATELHLKRLIVGGFEGVYEIGRIFRNEG-MSTRHNPEFTS 272

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +++ +++ +   ++N  E + R      ++ + +  N ++I      +R
Sbjct: 273 IELYVAYEDMFFLMNLTEEIFRVCNAAVNSNSIIEYNNVKIDLSKPFKR 321



 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A +  MPP  GI  GIDR+VMLL  ++++++V LFP
Sbjct: 459 ALEHAMPPTAGIGIGIDRLVMLLTNSESIKDVLLFP 494


>gi|323451918|gb|EGB07794.1| hypothetical protein AURANDRAFT_59065 [Aureococcus anophagefferens]
          Length = 485

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G+PP GG+  GIDR+VMLL  A ++R+V  FP+
Sbjct: 444 AVEHGLPPTGGLGIGIDRLVMLLTNAPSIRDVIAFPL 480



 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 15/177 (8%)

Query: 125 RFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           R++ R LDL     + +    R +I + +R  +    F+E  TP L  S P GA      
Sbjct: 146 RYRRRELDLIANPDVRRTFELRAKITSGIRRFLDDRGFLEIETPTL-HSQPGGAEAKPFE 204

Query: 184 SRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           ++ N       L  A + + + L+  GFDR +++   FR+E   +   P EF  +++  +
Sbjct: 205 TKHNALDLDLTLRIATELHLKRLVVGGFDRVYELGRIFRNEGVSTRHNP-EFTSVELYQA 263

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNT----------VSNNFLRICYDDAIRRYGTD 289
           + + DD++   E ++  + E    G T          VS  + R+   + +R  G D
Sbjct: 264 YADYDDMMVLTETLVESLAENLV-GTTQLPYADETIDVSAPWRRVTMSEVVRDAGVD 319


>gi|146419551|ref|XP_001485737.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 587

 Score = 45.8 bits (107), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 84/167 (50%), Gaps = 9/167 (5%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           G++ + A  +++L+     LP   FG ++  +  R++ R+LDL   D++      R++II
Sbjct: 201 GELSVFATSVQLLTPCLHMLPTEHFGFKD--QEARYRKRYLDLIMNDSVRDRFKVRSKII 258

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLLMA 207
             +R  + + +FIE  TP++   +    A+ F+   + +N   F  +  AP+ + + L+ 
Sbjct: 259 GFIRDFLDSRDFIEVETPMMNVIAGGATAKPFITHHNDLNMDMFMRV--APELFLKELVV 316

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            G DR ++I   FR+E       P EF   +   ++ +  D+++  E
Sbjct: 317 GGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTE 362



 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  +  +REV LFP
Sbjct: 542 ALEYGLPPTAGWGCGIDRLAMFLTDSNTIREVLLFP 577


>gi|300087982|ref|YP_003758504.1| class II tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527715|gb|ADJ26183.1| tRNA synthetase class II (D K and N) [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 300

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 8/93 (8%)

Query: 131 LDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQ 188
           +D+ R T   +++ +R  II ++R   +  +++E  TP+LTA   PE   D +   R   
Sbjct: 1   MDIERLTKKGRSLRRRAEIIKAIRDFFLHRDYLEVETPLLTAVPIPETHIDAIATDR--- 57

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
             F  L  +P+ Y + L+A+G+DR FQI   FR
Sbjct: 58  -GF--LVSSPEIYMKPLLAAGYDRIFQICHSFR 87


>gi|195171943|ref|XP_002026761.1| GL27002 [Drosophila persimilis]
 gi|194111700|gb|EDW33743.1| GL27002 [Drosophila persimilis]
          Length = 518

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  + N++EV LFP
Sbjct: 456 ALEYGLPPTGGFGMGIDRLTMFLTDSNNIKEVLLFP 491


>gi|147792043|emb|CAN72992.1| hypothetical protein VITISV_022939 [Vitis vinifera]
          Length = 160

 Score = 45.8 bits (107), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M+L  ++N++EV LFP
Sbjct: 93  ALEYGLPPTGGWGLGIDRLTMMLTDSQNIKEVLLFP 128


>gi|302335189|ref|YP_003800396.1| asparaginyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319029|gb|ADK67516.1| asparaginyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 467

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 126/320 (39%), Gaps = 76/320 (23%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS-EWVLCIDGL 76
           GS V ++GWV             IRD      VV N D +CF+  + V + E V   D +
Sbjct: 18  GSEVTVAGWVR-----------SIRDMKNFGFVVLN-DGSCFKDVQVVMNREKVANYDQV 65

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYR-FLDLR 134
               +    +A ++TG + L+  + +   + A E+ +      +YP   + + R FL   
Sbjct: 66  T---TLTVGSALVVTGTLALTPDRPQPFELQAAEVVIEGAARPDYPMQKKRQSREFL--- 119

Query: 135 RDTLHKNIVKRTRIINSM-RCRMIA----------ENFIECSTPILTASSPEGARDFLVP 183
                +++  RT +  ++ R R +A            F+  +TPI+TAS  EGA +    
Sbjct: 120 --RTQQHLRSRTNLFRAVFRVRSVAAFAIHQFFQGRGFVYVNTPIITASDAEGAGEMFRV 177

Query: 184 SRVNQGS--------------FYALPQAPQQYKQLL---MASGFDRYFQIAPCFRDEDPR 226
           + ++  +              F+          QL     A  F   +   P FR E+  
Sbjct: 178 TTIDPANPPLTEDGKVDYSRDFFGKATNLTVSGQLQGENFAMSFGDVYTFGPTFRAENSN 237

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVL-----------------------RGVFEE 263
           + R   EF+ ++ EM+F +    ++  E +L                       +G+ E 
Sbjct: 238 TRRHAAEFWMVEPEMAFCDLAGEMDVSEEMLKYVITYVMDRCPDEIDMLNSFVDKGLRER 297

Query: 264 FSNGNTVSNNFLRICYDDAI 283
            S  +  S++F R+ Y DA+
Sbjct: 298 LS--HVASSDFARVSYTDAV 315


>gi|15836464|ref|NP_300988.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|8979305|dbj|BAA99139.1| lysyl tRNA synthetase [Chlamydophila pneumoniae J138]
          Length = 527

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           GMPP GG   G+DR+VM+L  A ++R+V  FP+ + F
Sbjct: 485 GMPPAGGFGIGVDRLVMILTNAASIRDVLYFPVMRRF 521



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 70/321 (21%), Positives = 126/321 (39%), Gaps = 42/321 (13%)

Query: 5   RTHSCGDLGVSDVG-----SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           +T +  +LG S+         VR +G +   R  G   F  I DH    QV+ N +    
Sbjct: 46  KTFASQELGNSEAAMSRSTPRVRFAGRLVLFRAMGKNAFGQILDHNQTIQVMFNREFTSV 105

Query: 60  E-------------IAKSVRSEWVLCIDG-LVMSRSAETINANIITGQIELSAQKIEILS 105
                         I K +    +L IDG L  + S E     ++   + L  + +    
Sbjct: 106 HGLSEDAEITPIKFIEKKLDLGDILGIDGYLFFTHSGEL---TVLVETVTLLCKSL---- 158

Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
               L LP        + +R++ R+LDL     +    VKR+ II  +R  M A  F+E 
Sbjct: 159 ----LSLPDKHAGLSDKEVRYRKRWLDLISSREVSDTFVKRSYIIKLIRNYMDAHGFLEV 214

Query: 165 STPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TPIL        A+ F           +         K++L+  G  R +++   FR+E
Sbjct: 215 ETPILQNIYGGAEAKPFTTTMEALHSETFLRISLEIALKKILVG-GAPRIYELGKVFRNE 273

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
                  P EF  ++   ++++  +++  +EN++  +    ++ NT       + Y  + 
Sbjct: 274 GIDRTHNP-EFTMIEAYAAYMDYKEVMVFVENLVEHLVRAVNHDNT------SLVY--SY 324

Query: 284 RRYGTDKPDLRNPIIMHNVTE 304
            ++G  + D + P I   + E
Sbjct: 325 WKHGPQEVDFKAPWIRMTMKE 345


>gi|313665724|ref|YP_004047595.1| lysine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949826|gb|ADR24422.1| lysine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 500

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 127/289 (43%), Gaps = 19/289 (6%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPD---SAC 58
           +Y+ +S  +L ++     V ++G +   R  G    F++I D     Q+    D      
Sbjct: 46  KYKDYSKEEL-LNLTQELVIVAGRIKLYREAGKKAAFVNIDDQDSSIQLYVRLDEIGQEA 104

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE 117
           FE  + +    ++ + G++M             G++ +  +++ +LS A   LP    G 
Sbjct: 105 FEDFRDLDLGDIIGVKGIMMRTDH---------GELSIRCKEVVLLSKALRPLPDKHAGI 155

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
           ++  E  R +Y  L +  D + K    RT+II +M+  +    ++E  TPIL +      
Sbjct: 156 QDIEEKYRRRYVDLIMNHD-VRKTFQARTKIIRTMQNFLDNRGYMEVETPILHSLKGGAS 214

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F+    V     Y L  A + + + L+  GF+  ++I   FR+E   S R   EF  
Sbjct: 215 AKPFVTHYNVLNTDVY-LRIATELHLKRLIVGGFEGVYEIGRIFRNE-GMSTRHNPEFTS 272

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +++ +++ +   +++  E + R      ++ + +  N ++I      +R
Sbjct: 273 IELYVAYEDMFFLMDLTEEIFRVCNSAVNSSSVIEYNNVKIDLSKPFKR 321



 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A +  MPP  GI  GIDR+VMLL  + ++++V LFP
Sbjct: 459 ALEHAMPPTAGIGIGIDRLVMLLTNSDSIKDVLLFP 494


>gi|160878256|ref|YP_001557224.1| asparaginyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160426922|gb|ABX40485.1| asparaginyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 472

 Score = 45.8 bits (107), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 30/264 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
           +G  + + GWV  VR      F+ + D   +   Q+V     + F EI+K      V+  
Sbjct: 26  LGKKITVGGWVRSVRDTKTFGFIVMSDGTFFETLQIVYTDKLSNFAEISKFNVGSAVVVT 85

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             LV +  A+           E+ A+++ +L  A     P+  +R   E +R     L  
Sbjct: 86  GTLVATPDAKQ--------PFEIQAEEV-LLEGASTSDYPLQKKRHSLEFLR-AMTHLRP 135

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPS-------R 185
           R +T       R+ +  ++       +F+   TP++T S  EGA + F V +       +
Sbjct: 136 RTNTFQAVFRVRSLVAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDLNNIPK 195

Query: 186 VNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +G       F+  P       QL     A  F   +   P FR E+  + R   EF+ 
Sbjct: 196 TKEGQVDFDQDFFNKPTNLTVSGQLNGETYAMAFKNIYTFGPTFRAENSNTTRHAAEFWM 255

Query: 237 LDMEMSFVEQDDILNTMENVLRGV 260
           ++ E++F +  D +   E++L+ V
Sbjct: 256 IEPEIAFADLKDDMILAESMLKYV 279



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G   H G   G +R VM L G  N+R+V  FP + N CDL
Sbjct: 431 KYGSARHAGFGLGFERCVMYLTGMGNIRDVIPFPRTVNNCDL 472


>gi|329298731|ref|ZP_08256067.1| asparaginyl-tRNA synthetase [Plautia stali symbiont]
          Length = 466

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 108/279 (38%), Gaps = 52/279 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V S V + GWV R R          RD       +A  D +CF   ++V +  +      
Sbjct: 16  VDSEVTVRGWV-RTR----------RDSKAGLSFIAVYDGSCFNPVQAVVNNSLNNYQDE 64

Query: 77  VMSRSAETINANIITGQI----------ELSAQKIEILS-VAEELPLPVFGEREYPESIR 125
           V+  +  T  + I+TG++          EL A ++E+   V +    P+  +R    SI 
Sbjct: 65  VLRLT--TGCSVIVTGKVVESPGEGQAFELQATQVEVTGWVDDPDTYPMAAKRH---SIE 119

Query: 126 FKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVP 183
           +      LR  T     V R R  +     R   EN +   STP++TAS  EGA +    
Sbjct: 120 YLREVAHLRPRTNIVGAVARVRHTLAQALHRFFHENGYFWVSTPLITASDTEGAGEMF-- 177

Query: 184 SRVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDE 223
            RV+      LP+ PQ                    Q      A    + +   P FR E
Sbjct: 178 -RVSTLDLENLPRDPQGNVDFDKDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFRAE 236

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           +  + R   EF+ L+ E++F   DD     E +L  VF+
Sbjct: 237 NSNTSRHLAEFWMLEPEVAFATLDDAAALAEAMLNYVFK 275



 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDVLNARLAEMGLNKEDY-----WWYRDLRRYGTVPHAGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 436 LGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|15618840|ref|NP_225126.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|16752102|ref|NP_445469.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33242296|ref|NP_877237.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|11387161|sp|Q9Z6X5|SYK_CHLPN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|4377254|gb|AAD19069.1| Lysyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189844|gb|AAF38715.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33236807|gb|AAP98894.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 527

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           GMPP GG   G+DR+VM+L  A ++R+V  FP+ + F
Sbjct: 485 GMPPAGGFGIGVDRLVMILTNAASIRDVLYFPVMRRF 521



 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 70/321 (21%), Positives = 126/321 (39%), Gaps = 42/321 (13%)

Query: 5   RTHSCGDLGVSDVG-----SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           +T +  +LG S+         VR +G +   R  G   F  I DH    QV+ N +    
Sbjct: 46  KTFASQELGNSEAAMSRSTPRVRFAGRLVLFRAMGKNAFGQILDHNQTIQVMFNREFTSV 105

Query: 60  E-------------IAKSVRSEWVLCIDG-LVMSRSAETINANIITGQIELSAQKIEILS 105
                         I K +    +L IDG L  + S E     ++   + L  + +    
Sbjct: 106 HGLSEDAEITPIKFIEKKLDLGDILGIDGYLFFTHSGEL---TVLVETVTLLCKSL---- 158

Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
               L LP        + +R++ R+LDL     +    VKR+ II  +R  M A  F+E 
Sbjct: 159 ----LSLPDKHAGLSDKEVRYRKRWLDLISSREVSDTFVKRSYIIKLIRNYMDAHGFLEV 214

Query: 165 STPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TPIL        A+ F           +         K++L+  G  R +++   FR+E
Sbjct: 215 ETPILQNIYGGAEAKPFTTTMEALHSEMFLRISLEIALKKILVG-GAPRIYELGKVFRNE 273

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
                  P EF  ++   ++++  +++  +EN++  +    ++ NT       + Y  + 
Sbjct: 274 GIDRTHNP-EFTMIEAYAAYMDYKEVMVFVENLVEHLVRAVNHDNT------SLVY--SY 324

Query: 284 RRYGTDKPDLRNPIIMHNVTE 304
            ++G  + D + P I   + E
Sbjct: 325 WKHGPQEVDFKAPWIRMTMKE 345


>gi|321257875|ref|XP_003193737.1| asparagine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317460207|gb|ADV21950.1| asparagine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 513

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 51/123 (41%), Gaps = 8/123 (6%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           +E+K       P TM     E+ +G    +++ F   L  +  EIA G +R H    +  
Sbjct: 397 KEQKPFYMLPTPSTMKNEKTEASRGP---TVECFDL-LFPHWGEIAGGSLREHRLAELTH 452

Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
               +G+ KE     +G      + G  PHGG   G DR V    G  NVR+V  F   +
Sbjct: 453 VIEEMGMKKE----EYGWYLDLRKYGSVPHGGWGMGWDRWVGWATGMGNVRDVVPFARWK 508

Query: 567 NFC 569
             C
Sbjct: 509 GHC 511



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 103/262 (39%), Gaps = 29/262 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++GW+  VR H  + FL++ D      V A        +    R+E      GL +  
Sbjct: 45  VEVNGWIKSVRAHKNVAFLEVSDGSTGENVQAV-------LKGKNRAE------GLSIGT 91

Query: 81  SAE---TINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           S +    +  +   GQ +EL  +  ++L   +    P+  ++  P S+      L  R  
Sbjct: 92  STKLKGRLEQSRGRGQDVELVVEDAQVLGTCDAEAYPI-QKKSLPASVLRDNAHLRFRTS 150

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV-------PSRVNQG 189
                +  R  +         + +F+   TPILT S  EGA +           S  +  
Sbjct: 151 QTAAVMRIRDALARDWHDWFESNDFVHVHTPILTGSDCEGAGEVFTIVDHPPPSSPTSPQ 210

Query: 190 SFYALPQAPQQYKQLLMAS---GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+          QL + +      R + ++P FR E   + R   EF+ L+ E+++ + 
Sbjct: 211 PFFPHSVHLTVSGQLHLEAPTHALSRTYTLSPAFRAEPSLTSRHLSEFHMLEAEVAWQDD 270

Query: 247 -DDILNTMENVLRGVFEEFSNG 267
            D +L+ +E  ++ V     NG
Sbjct: 271 LDGLLSIVEEGMKNVVGNILNG 292


>gi|190345427|gb|EDK37310.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 587

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 84/167 (50%), Gaps = 9/167 (5%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           G++ + A  +++L+     LP   FG ++  +  R++ R+LDL   D++      R++II
Sbjct: 201 GELSVFATSVQLLTPCLHMLPTEHFGFKD--QEARYRKRYLDLIMNDSVRDRFKVRSKII 258

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLLMA 207
             +R  + + +FIE  TP++   +    A+ F+   + +N   F  +  AP+ + + L+ 
Sbjct: 259 GFIRDFLDSRDFIEVETPMMNVIAGGATAKPFITHHNDLNMDMFMRV--APELFLKELVV 316

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            G DR ++I   FR+E       P EF   +   ++ +  D+++  E
Sbjct: 317 GGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTE 362



 Score = 41.6 bits (96), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  +  +REV LFP
Sbjct: 542 ALEYGLPPTAGWGCGIDRLAMFLTDSNTIREVLLFP 577


>gi|332158426|ref|YP_004423705.1| asparagine synthetase A [Pyrococcus sp. NA2]
 gi|331033889|gb|AEC51701.1| asparagine synthetase A [Pyrococcus sp. NA2]
          Length = 294

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 18/189 (9%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECS----TPILTASSPEGARDFLVPSRVN-QGSFY 192
           ++K I  +T+ ++ M    +   F        +PI     P+ A + + P  V   G+  
Sbjct: 11  IYKAIELQTKTLDYMTKFFVERGFKWLLPVMLSPITDPLWPDPAGEGVKPLEVEVYGTRM 70

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG----EFYQLDMEMSFVEQDD 248
            L  +   +KQL +A G  + F ++P  R E    DR  G    EF QLD E+      D
Sbjct: 71  RLTHSMILHKQLAIAMGLKKIFVLSPNIRIES--RDRDDGKHAYEFTQLDFEIEGASMKD 128

Query: 249 ILNTMENVLRGVF---EEFSNGNTVSNNFLRIC-YDDAIRRYGTDKP---DLRNPIIMHN 301
           ++  +E ++ G+F   EE++          ++  Y D +  +G+D+    ++  P  + N
Sbjct: 129 VMKLIEELIYGLFRKAEEWTGREFPKARHFKVYEYQDILDEFGSDEKASEEMDEPFWIVN 188

Query: 302 VTEHFVHSE 310
           +   F   E
Sbjct: 189 IPREFYDRE 197



 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 7/85 (8%)

Query: 482 YDLVCN-GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG-MPPHGG 538
           YDL+   G+ E++SGG R    E +L+     G+++E     F       + G + P  G
Sbjct: 205 YDLILPYGYGEVSSGGEREWEYEKILRKIRASGLNEE----SFRPYLEIAKAGKLKPSAG 260

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
              G++R+V  ++G K++ EV  FP
Sbjct: 261 AGIGVERLVRFIVGVKHIAEVQPFP 285


>gi|297578880|ref|ZP_06940808.1| asparaginyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297536474|gb|EFH75307.1| asparaginyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 481

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 67/317 (21%), Positives = 118/317 (37%), Gaps = 65/317 (20%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF   ++V         +
Sbjct: 31  VDSEVTVRGWIRTRRDSKAGISFLAIYD------------GSCFNPIQAVVPNNLNNYDN 78

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 79  EVLKLTTGCSVEVTGKIVESPASGQAFELAASDVKVVGWVEDADTYPMAKTRH---SIEY 135

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 136 LREVAHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 195

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y Q        L  SG            + +   P FR E+  +
Sbjct: 196 TLDMENLPCTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNT 255

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT-------- 269
            R   EF+ ++ E++F + + +    E++L+ VF+          EF N           
Sbjct: 256 SRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARL 315

Query: 270 ---VSNNFLRICYDDAI 283
              V ++F ++ Y DAI
Sbjct: 316 EQFVESDFAQVDYTDAI 332


>gi|254576865|ref|XP_002494419.1| ZYRO0A01034p [Zygosaccharomyces rouxii]
 gi|238937308|emb|CAR25486.1| ZYRO0A01034p [Zygosaccharomyces rouxii]
          Length = 501

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 94/201 (46%), Gaps = 27/201 (13%)

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP------ESIRFK 127
           DGL +++     +  +++G+  L+ ++   LS+  E P  V    + P      +  + K
Sbjct: 94  DGLNLAQRYRAGDYVLVSGRPGLT-ERQRTLSIRAEKPPTVLAAAQQPLPPSLEDRAKLK 152

Query: 128 Y-RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSR 185
             R LD +   +   +V R ++  ++R  +   +F+E  TPIL+  ++   A  F+  S 
Sbjct: 153 QNRVLDYQLSGVEM-LVTRHKVTRAVREFLDGRDFVEVETPILSNKANGASAEAFVTYSN 211

Query: 186 VNQGSFYALPQ---------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                  ALP+         AP+ + + L+  G +R +++   FR+E   +   P EF  
Sbjct: 212 -------ALPENEKRLELRVAPELWLKRLIIGGLERVYELGKVFRNEGIDATHNP-EFTT 263

Query: 237 LDMEMSFVEQDDILNTMENVL 257
           L+   ++V  +D++  + ++L
Sbjct: 264 LEFYQAYVTMEDLIENVRDML 284



 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 24/35 (68%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           A + GMPP GG+  GIDR+V LLLG+  + EV  F
Sbjct: 458 AMKWGMPPTGGVGLGIDRLVALLLGSTRIEEVLAF 492


>gi|87301696|ref|ZP_01084536.1| lysyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87283913|gb|EAQ75867.1| lysyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 506

 Score = 45.8 bits (107), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP GG+  GIDR+ MLL  + ++R+V  FP+
Sbjct: 460 ALEVGMPPTGGLGIGIDRLAMLLTDSPSIRDVIAFPL 496



 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 33/202 (16%)

Query: 125 RFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           R++ R+LDL      R+T  +    R  +++ +R  +    F+E  TP+L A +  G  D
Sbjct: 162 RYRQRYLDLVVSPQTRETFRR----RALLVSGIRRWLDERQFLEIETPVLNAEA--GGAD 215

Query: 180 FLVPSRVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
              P   +  +      L  A + + + L+  GF+R +++   FR+E   +   P EF  
Sbjct: 216 -ARPFTTHHNTLDLPLVLRIATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP-EFTT 273

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +++  ++ +  D++   E ++  V ++             +C   AI   GT   DL  P
Sbjct: 274 VEIYQAYADYTDMMVLTEELIASVCQQ-------------VCGTTAIEYQGT-AIDLTPP 319

Query: 297 ---IIMHNVTEHFVHSEFRVFS 315
                MH + E     +F  FS
Sbjct: 320 WRRATMHELVEQATGLDFNGFS 341


>gi|323487320|ref|ZP_08092620.1| hypothetical protein HMPREF9474_04371 [Clostridium symbiosum
           WAL-14163]
 gi|323694241|ref|ZP_08108417.1| asparagine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323399365|gb|EGA91763.1| hypothetical protein HMPREF9474_04371 [Clostridium symbiosum
           WAL-14163]
 gi|323501714|gb|EGB17600.1| asparagine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 463

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 54/260 (20%), Positives = 104/260 (40%), Gaps = 30/260 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           +++ GWV  VR      F+ + D  ++   Q+V +     F +I+K      ++    LV
Sbjct: 21  IQIGGWVRSVRGSKAFGFVVVSDGSYFETLQIVYHDTLENFSDISKLNVGAAIIVKGKLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+         +I+ S   IE  S ++    P+  +R   E +R     L  R +T
Sbjct: 81  ATPEAKQ------PFEIQASEILIEGPSASD---YPLQKKRHTLEYLR-TISHLRPRTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+    ++       +F+   TP++T S  EGA +    + ++  +    P+ 
Sbjct: 131 FQAVFRVRSLAAYAIHQYFQEHDFVYVHTPLITGSDCEGAGEMFQVTTLDLNNVPKTPEG 190

Query: 198 PQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              + Q                    A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 191 AVDFAQDFFNKPTNLTVSGQLNAETYAMAFRNVYTFGPTFRAENSNTTRHAAEFWMIEPE 250

Query: 241 MSFVEQDDILNTMENVLRGV 260
           M+F + +D +   E++L+ V
Sbjct: 251 MAFADLNDNMALAESMLKYV 270



 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + ++     +G+ KE     +G      + G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDYDKLVARMDELGLRKE----DYGFYLDLRKYGSTRHSGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R++  FP + N C+L
Sbjct: 442 LTGVSNIRDIIPFPRTVNNCEL 463


>gi|220931658|ref|YP_002508566.1| asparaginyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992968|gb|ACL69571.1| asparaginyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 463

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 109/270 (40%), Gaps = 56/270 (20%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           GWV   R    I FL+I D   +     V+  PD    +   S+ +   + I G +    
Sbjct: 27  GWVRTKRVSKNIAFLEINDGSTLKNLQIVILQPDKFPLD---SINTGASVKIKGYL---- 79

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-ESIRFKYRFLDLRRDTLHK 140
            E +        IE+ A++I ++  A     PV    +YP +  R  + FL   R+  H 
Sbjct: 80  -EEVKGR--EQSIEMKAEEITLIGEA-----PV----DYPMQKKRHTFEFL---REIAH- 123

Query: 141 NIVKRTR---IINSMRCRMIA--------ENFIECSTPILTASSPEGARDFLVPSR---- 185
            +  RT    ++N  R +M            F    +PI+T    EGA +    +     
Sbjct: 124 -LRPRTNTFGVVNRFRSKMAYAIHKFFQDRGFHYIHSPIITTGDAEGAGEVFTVTTFDLQ 182

Query: 186 ---VNQGSFYALPQ----------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
              +++G      Q             Q +  LMA+     +   P FR E+  + R   
Sbjct: 183 NPPLSEGGEIDFSQDFFGEEAGLTVSGQLEAELMATALGDVYTFGPTFRAENSNTSRHAS 242

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           EF+ ++ EM+F + +++++ +E  ++ +F+
Sbjct: 243 EFWMIEPEMAFCDLEEMMDIIEEFIKFLFK 272



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    +V+L+    + ++ E    ++       + G  PH G   G 
Sbjct: 380 LVPQVGEIIGGSQREERYDVLLKRMKELDMNIE----KYQWFLDIRKYGTVPHSGFGLGF 435

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R++M + G KN+R+V  FP +
Sbjct: 436 ERLLMYISGMKNIRDVIPFPRT 457


>gi|330720194|gb|EGG98579.1| Aspartyl-tRNA synthetase @ Aspartyl-tRNA(Asn) synthetase [gamma
           proteobacterium IMCC2047]
          Length = 55

 Score = 45.8 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/45 (44%), Positives = 32/45 (71%)

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +ML+ GA ++R+V  FP +Q+   ++  +PS VS EQLREL +R+
Sbjct: 1   MMLMTGAASIRDVIAFPKTQSAACVMTDAPSEVSQEQLRELSIRV 45


>gi|269121090|ref|YP_003309267.1| asparaginyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268614968|gb|ACZ09336.1| asparaginyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 462

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 107/261 (40%), Gaps = 32/261 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           + L+GW+ + R      FL++ D   +   QVV +   + F EI++   S  V     LV
Sbjct: 20  LELNGWIRKRRDQKNFGFLEVNDGTFFNGIQVVFDDSLSNFDEISRLSISSSVHVKGVLV 79

Query: 78  MSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            S            GQ  E+ A++I I + A+ L  P+  +R   E +R     L  R +
Sbjct: 80  QSEGK---------GQTFEIKAKEITIYNKAD-LDYPLQNKRHTLEYLR-TIAHLRPRTN 128

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T       R+ +  ++        F+   TPI+T S  EGA +    + ++        +
Sbjct: 129 TFMAVFRVRSLMSYAIHKFFNERGFVYVHTPIITGSDTEGAGEMFQLTTLDLKDIPKNDK 188

Query: 197 APQQYKQL-------LMASG----------FDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
              +YK         L  SG          F   +   P FR E   + +   EF+ ++ 
Sbjct: 189 GEVEYKDDFFGKQANLTVSGQLNVETFCMAFKNTYTFGPTFRAEKSNTPKHVSEFWMMEP 248

Query: 240 EMSFVEQDDILNTMENVLRGV 260
           E++F + D  ++  E++++ +
Sbjct: 249 EIAFADLDVNMDIAEDMMKYI 269


>gi|293393226|ref|ZP_06637541.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291424372|gb|EFE97586.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 364

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 4/83 (4%)

Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           + NGF E+  G  +    E   +  +  G+ ++ +++    L  A + GMP   G+A G+
Sbjct: 284 LANGFRELTDGNEQRQRFEQDNRKRAARGLPEQPIDH---NLLDALRHGMPDCAGVALGV 340

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR+VML LGA+++ EV  FP+++
Sbjct: 341 DRLVMLALGAESLSEVIAFPVTR 363


>gi|260581653|ref|ZP_05849450.1| lysyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260095246|gb|EEW79137.1| lysyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|309973672|gb|ADO96873.1| Putative lysyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 333

 Score = 45.8 bits (107), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           KN++KR +II  +R        +E  TP+L+            + +FL P   NQ     
Sbjct: 24  KNLLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFD-NQSKTLW 82

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI+  FR+E+   +R   EF  L+          ++N +
Sbjct: 83  LSTSPEYHMKRLLAAGSGPIFQISKVFRNEEA-GNRHNPEFTMLEWYRPHFHMHRLINEV 141

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 142 DDLLQQILD 150



 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 10/120 (8%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL----VCNGF-EIASGGIRNHMSE 502
           +E+ I   H P T  Q  +  +   D    + F++      + NGF E+A    + H  E
Sbjct: 214 KERPIAVYHFPST--QAALAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFE 271

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  F
Sbjct: 272 LDNQQRQKCELPTREIDERFLA---ALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 328


>gi|269302722|gb|ACZ32822.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 527

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           GMPP GG   G+DR+VM+L  A ++R+V  FP+ + F
Sbjct: 485 GMPPAGGFGIGVDRLVMILTNAASIRDVLYFPVMRRF 521



 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 105/265 (39%), Gaps = 29/265 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-------------IAKSVRS 67
           VR +G +   R  G   F  I DH    QV+ N +                  I K +  
Sbjct: 67  VRFAGRLVLFRAMGKNAFGQILDHNQTIQVMFNSEFTSVHGLSKDAGVVPIKFIEKKLDL 126

Query: 68  EWVLCIDG-LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
             +L IDG L  + S E     ++   + L  + +        L LP        + +R+
Sbjct: 127 GDILGIDGYLFFTHSGEL---TVLVETVTLLCKSL--------LSLPDKHAGLSDKEVRY 175

Query: 127 KYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL     +    VKR+ II  +R  M A  F+E  TPIL        A+ F    
Sbjct: 176 RKRWLDLISSREVSDTFVKRSYIIKLIRNYMDAHGFLEVETPILQNIYGGAEAKPFTTKM 235

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  +         K++L+  G  R +++   FR+E       P EF  ++   +++
Sbjct: 236 EALHSEMFLRISLEIALKKILVG-GAPRIYELGKVFRNEGIDRTHNP-EFTMIEAYAAYM 293

Query: 245 EQDDILNTMENVLRGVFEEFSNGNT 269
           +  +++  +EN++  +    ++ NT
Sbjct: 294 DYQEVMVFVENLVEHLVRAVNHDNT 318


>gi|240279869|gb|EER43374.1| lysyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 541

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 4/118 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYK 202
           R+ II  +R   +  +F+E  TPIL AS   GA  R F   +        +L  AP+ + 
Sbjct: 235 RSSIIQYIRSFFLDRSFMEVETPIL-ASVAGGAVARPFQTSATEFPDRPLSLRIAPELWL 293

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           + L+  GFD+ F+I P FR+E       P EF   +   +F + + ++   E+   G+
Sbjct: 294 KRLVVGGFDKVFEIGPSFRNEGLDKTHNP-EFTTCEFYHAFADLETLITLTESFFTGL 350


>gi|46446862|ref|YP_008227.1| lysyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25]
 gi|46400503|emb|CAF23952.1| probable lysyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 529

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           VCN + E+    I+ H+ E+              ++  F     A   GMPP GGI  GI
Sbjct: 448 VCNSYSELNDPEIQRHLLELQSDRREAGDEEASPLDEEF---IEAICQGMPPTGGIGIGI 504

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           DR+VM+L  + ++R+V  FP
Sbjct: 505 DRLVMILTNSHSIRDVLYFP 524



 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 49/233 (21%), Positives = 100/233 (42%), Gaps = 30/233 (12%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK----RTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
           + +R++ R+LDL     H ++ K    R+ I+  +R       F+E  TPIL +      
Sbjct: 177 KELRYRKRWLDL---ISHLDVAKVFRIRSHILKEIRSYFDQYQFLEVETPILQSIYGGAE 233

Query: 177 ARDFLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           AR F+   + ++Q  F  +       K  L+  G  + +++A  FR+E    +  P EF 
Sbjct: 234 ARPFITKLNALDQEMFLRISLEIPLKK--LIVGGMHKVYEMARVFRNEGIDRNHNP-EFT 290

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------------FLRICYD 280
            L+   S+ +  D++N +EN+   +  +      V                  ++R+   
Sbjct: 291 LLEAYASYWDYFDMMNFVENLFEKLALDLYGTTKVPYTAHEGAETIYIDMKAPWIRLTMK 350

Query: 281 DAIRRYGTDKPDLRNPIIMHNVTEHFVH---SEFRVFSKILSVNPGYEVWAIP 330
           ++I++Y    P++ +   M ++     H    + +  S+ L +   +EV+  P
Sbjct: 351 ESIKKYANLDPNVLSDEEMRHLLLESAHCDPKKIKGLSRGLLIAALFEVFVEP 403


>gi|7437594|pir||B71442 probable asparagine-tRNA ligase - Arabidopsis thaliana
 gi|2245089|emb|CAB10511.1| asparagine--tRNA ligase like protein [Arabidopsis thaliana]
 gi|7268482|emb|CAB78733.1| asparagine--tRNA ligase like protein [Arabidopsis thaliana]
          Length = 432

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 19/175 (10%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRS 67
            D G+S VG  + + GWV  +R    + F++I D   ++  Q V   D+  ++  +S   
Sbjct: 101 ADEGLSRVGQSLNIMGWVRTLRSQSSVTFIEINDGSCLSNLQCVMTSDAEGYDQVES--- 157

Query: 68  EWVLCIDGLVMSRSAETINANIITGQ-----IELSAQKIEILSVAEELPLPVFGEREYPE 122
                  G +++ ++ ++   I+  Q     +EL  +KI ++   +    P+  +R   E
Sbjct: 158 -------GSILTGASVSVQGTIVASQGTKQKVELKVEKIIVVGECDS-SYPIQKKRVSRE 209

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +R K   L  R +T       R  +  +         F+  ++PI+TAS  EGA
Sbjct: 210 FLRTKAH-LRPRTNTFGAVARVRNTLAYATHKFFQESGFVWVASPIITASDCEGA 263


>gi|228472298|ref|ZP_04057064.1| asparagine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276501|gb|EEK15225.1| asparagine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 474

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 54/262 (20%), Positives = 105/262 (40%), Gaps = 32/262 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V L GWV   R +    F+ + D   ++  QVV + +    E  K + +   + + G V+
Sbjct: 16  VTLRGWVRTFRSNR---FIALNDGSTLSNLQVVVDFEHTPEETLKRITTGAAIEVKGKVV 72

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
               +        GQ IE+ A ++ IL        P+  ++   E +R +   L +R + 
Sbjct: 73  ESQGK--------GQSIEVQATEVTILGDCNPDEYPIQPKKHSLEFLR-EQAHLRVRTNA 123

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R+ +  ++      + F   +TPI+T S  EGA +    + ++  +       
Sbjct: 124 FGAIMRVRSTLAYAIHKYFQEKGFFYVNTPIITGSDAEGAGEMFRVTTLDAKNPPLTETG 183

Query: 198 PQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              YK+                    A    + +   P FR E+  + R   EF+ ++ E
Sbjct: 184 EVDYKKDFFGRETNLTVSGQLEGETFAMSLGKIYTFGPTFRAENSNTSRHLAEFWMIEPE 243

Query: 241 MSFVEQDDILNTMENVLRGVFE 262
           M+F +  D +N  E+ ++ V +
Sbjct: 244 MAFYDLIDNMNLAEDFIKNVLK 265


>gi|71275198|ref|ZP_00651485.1| Asparaginyl-tRNA synthetase, class IIb [Xylella fastidiosa Dixon]
 gi|71898278|ref|ZP_00680452.1| Asparaginyl-tRNA synthetase, class IIb [Xylella fastidiosa Ann-1]
 gi|170731189|ref|YP_001776622.1| asparaginyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|71164007|gb|EAO13722.1| Asparaginyl-tRNA synthetase, class IIb [Xylella fastidiosa Dixon]
 gi|71732017|gb|EAO34074.1| Asparaginyl-tRNA synthetase, class IIb [Xylella fastidiosa Ann-1]
 gi|167965982|gb|ACA12992.1| asparaginyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 466

 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 119/318 (37%), Gaps = 57/318 (17%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G   VGS V + GWV   R    G+ F+ + D   +   QVV       +E    VR   
Sbjct: 12  GKIQVGSEVTVRGWVRTRRDSKAGLSFVSVSDGSCFAAIQVVTPAHLPNYET--EVRKLT 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
             C   +V+   A ++       Q E+ AQ IE++   E+        +++  S+ F   
Sbjct: 70  TGCAV-IVIGTLAPSLGQG---QQFEIQAQSIEVVGWVEDPETYPIQPKQH--SLEFLRE 123

Query: 130 FLDLR-RDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVN 187
              LR R  L   + +    ++    R   EN +   +TPI+T S  EGA       RV+
Sbjct: 124 VAHLRPRTNLFGAVARIRHCLSQAVHRFFHENGYYWITTPIITTSDAEGAGQMF---RVS 180

Query: 188 QGSFYALPQAPQQ----------YKQLLMASG----------FDRYFQIAPCFRDEDPRS 227
                 LP+               +  L  SG            + +   P FR E+  +
Sbjct: 181 TLDLVNLPRTETGGIDFSHDFFGKETFLTVSGQLNVEAYALALSKVYTFGPTFRAENSHT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE--------------EFSNGNTVS-- 271
            R   EF+ ++ E++F +  +     E  L+ +F+              E     T+S  
Sbjct: 241 PRHLAEFWMIEPEIAFADLVEDARVAEQFLKFLFKTVLEERADDLAFITERVEKTTISKL 300

Query: 272 -----NNFLRICYDDAIR 284
                + F RI Y DAI+
Sbjct: 301 EGFIKSPFERIEYTDAIK 318


>gi|256384301|gb|ACU78871.1| lysine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385134|gb|ACU79703.1| lysine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296456023|gb|ADH22258.1| lysine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 500

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A +  MPP  GI  GIDR+VMLL  ++++++V LFP
Sbjct: 459 ALEHAMPPTAGIGIGIDRLVMLLTNSESIKDVLLFP 494



 Score = 44.7 bits (104), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 128/289 (44%), Gaps = 19/289 (6%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDS---AC 58
           +Y+ +S  DL ++     V ++G +   R  G    F++I D     Q+    D      
Sbjct: 46  KYKDYSKEDL-LNLNQELVVVAGRIKLYREAGKKAAFVNIDDQDSSIQLYVRLDEIGDQS 104

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE 117
           FE  ++     ++ + G++M             G++ +  +++ +LS A   LP    G 
Sbjct: 105 FEDFRNFDLGDIIGVKGIMMRTDH---------GELSIRCKEVVLLSKALRPLPDKHAGI 155

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
           ++  E  R +Y  L +  D + K    RT+II +++  +  + ++E  TPIL +      
Sbjct: 156 QDIEEKYRRRYVDLIMNHD-VRKTFQARTKIIRTLQNFLDNKGYMEVETPILHSLKGGAS 214

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F+    V     Y L  A + + + L+  GF+  ++I   FR+E   S R   EF  
Sbjct: 215 AKPFITHYNVLNTDVY-LRIATELHLKRLIVGGFEGVYEIGRIFRNEG-MSTRHNPEFTS 272

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +++ +++ +   +++  E + R      ++ + +  N ++I      +R
Sbjct: 273 IELYVAYEDMFFLMDLTEEIFRVCNAAVNSSSIIEYNNVKIDLSKPFKR 321


>gi|313207030|ref|YP_004046207.1| asparaginyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312446346|gb|ADQ82701.1| asparaginyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315022576|gb|EFT35603.1| asparaginyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325335533|gb|ADZ11807.1| Aspartyl/asparaginyl-tRNA synthetase [Riemerella anatipestifer
           RA-GD]
          Length = 482

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 107/265 (40%), Gaps = 35/265 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + + GWV   R +    F+ + D   +   Q+V + +    EI K++ +   L + G V+
Sbjct: 21  ITIEGWVRAFRSNR---FIALNDGSTLNNLQIVVDFEKFDDEIIKNIHTASSLKVTGEVV 77

Query: 79  SRSAETINANIITGQ-IELSAQKIEIL--SVAEELPLPVFG-EREYPESIRFKYRFLDLR 134
                        GQ +E+ A+KIE+L  +++EEL   +   +R   E +R +   L  R
Sbjct: 78  ESQG--------AGQSVEIIAKKIELLGENLSEELQSTILQPKRHTLEKLR-EQAHLRFR 128

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +        R+ +  ++        F   +TPI+T +  EGA +    S  +       
Sbjct: 129 TNLFGAVFRVRSAVSFAIHQFFNQNQFFYINTPIITGADAEGAGEMFGVSNFDLNKVPKN 188

Query: 195 PQAPQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                 Y Q                    A G  R +   P FR E+  + R   EF+ +
Sbjct: 189 EDGEVDYTQDFFGKKTNLTVSGQLEAETAAMGLGRVYTFGPTFRAENSNTTRHLAEFWMV 248

Query: 238 DMEMSFVEQDDILNTMENVLRGVFE 262
           + E++F   +D ++  E+ L+ V +
Sbjct: 249 EPEVAFNNLEDNIDLAESFLKYVIQ 273



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    EV+ Q  +++ +     E+         + G  PH G   G++R+V+ 
Sbjct: 405 EIIGGSQREERLEVLKQKMADMNVD----EHELWWYLDTRKFGSVPHAGFGLGLERLVLF 460

Query: 550 LLGAKNVREVSLFPMS 565
           + G  N+R+V  FP +
Sbjct: 461 VTGMTNIRDVIPFPRT 476


>gi|255263772|ref|ZP_05343114.1| lysyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255106107|gb|EET48781.1| lysyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 486

 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 10/97 (10%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAF-------SNVGISKEVVENRFGGLYRAFQCGM 533
           +++   NG+EIA+     +  E  L  F       ++ G ++  V+  +     A    M
Sbjct: 392 RFESFANGWEIANAFSELNDPEKQLAIFEGQVAQDASRGETEREVDYEY---VAALDFAM 448

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+ MLL  A +++EV LFP  +   D
Sbjct: 449 PPTGGLGLGIDRLAMLLTDATHIKEVILFPTLRRRSD 485



 Score = 43.9 bits (102), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 25/233 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIAKSVRSEWVLCIDGLVM 78
           V ++G +H +R  G  +F+D+RD  G  QV ++        E+   ++      ++G+V 
Sbjct: 51  VTVAGRIHAIRNSG--MFVDLRDATGRIQVYSDVKGGGPIAEMLALMKVGDFASVEGVVR 108

Query: 79  SRSAETINANIITGQIELSAQKIEIL---SVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
                       TG+ EL+    ++    ++  E+P    G  +  E+I ++ R++DL  
Sbjct: 109 R-----------TGRGELTVNSTDVKLQSAMIGEMPDKHHGMSDV-EAI-YRARYIDLVS 155

Query: 136 DTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           +   K+  + R++I+ ++R      +++E  TP+L   S    AR F          FY 
Sbjct: 156 NQDSKDRFLARSKIVRAIRRTFEGMDYVEVETPMLHPISGGAAARPFTTHYNALDSQFY- 214

Query: 194 LPQAPQQYKQLLMASGFDR-YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           L  AP+ Y + L+  G     F+I   FR+E       P EF  L+   +F +
Sbjct: 215 LRIAPELYLKRLIVGGLAPGVFEINRNFRNEGVSKKHNP-EFTMLEAYEAFAD 266


>gi|169842655|ref|ZP_02875760.1| lysyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 60

 Score = 45.4 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 515 KEVVENRFGGLY-RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           KE V+   G  Y RA + GMPP GG+  GIDR+VML   + ++R+V L
Sbjct: 9   KEAVKEATGFDYIRALEYGMPPAGGLGIGIDRLVMLQTNSASIRDVML 56


>gi|221195832|ref|ZP_03568885.1| asparaginyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221184306|gb|EEE16700.1| asparaginyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 467

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 72/316 (22%), Positives = 125/316 (39%), Gaps = 68/316 (21%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ V ++GWV  VR      F+ + D             +CF+  + V +  +      V
Sbjct: 18  GTEVTVAGWVRSVRDMKNFGFVTLND------------GSCFKDLQVVMNREICANYDAV 65

Query: 78  MSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            S       A II G +EL+ ++ + + + A  + +      EYP  ++ K + L+  R 
Sbjct: 66  ASCGVGA--ALIIHGVLELTLERPQPIELQAHTIAIEGASSPEYP--MQKKRQSLEYLRT 121

Query: 137 TLHKNIVKRTRIINSM-RCRMIA----------ENFIECSTPILTASSPEGARDFLVPSR 185
             H  +  RT +  ++ R R +A          + F+  +TPI+T S  EGA +    + 
Sbjct: 122 QQH--LRPRTNLFRAVFRVRSVAAYAIHKFFQDQGFVYVNTPIITTSDAEGAGEMFQVTT 179

Query: 186 VNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSD 228
           ++  +          Y Q        L  SG          F   +   P FR E+  + 
Sbjct: 180 LDLENIPRTDAGKVDYTQDFFDTSAHLTVSGQLQAENFAMAFGDVYTFGPTFRAENSNTR 239

Query: 229 RLPGEFYQLDMEMSFVE--QD-DILNTM-ENVLRGVFEEFSN-----------------G 267
           R   EF+ ++ EM+F +  QD DI   M + V+  V E  ++                  
Sbjct: 240 RHAAEFWMIEPEMAFCDLAQDMDIAEAMLQYVISYVLEHCADELEMLNKFVDKGLLERLH 299

Query: 268 NTVSNNFLRICYDDAI 283
           +  ++ F R+ Y DAI
Sbjct: 300 HVATSEFARVSYTDAI 315


>gi|325093000|gb|EGC46310.1| lysyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 567

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 4/118 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYK 202
           R+ II  +R   +  +F+E  TPIL AS   GA  R F   +        +L  AP+ + 
Sbjct: 235 RSSIIQYIRSFFLDRSFMEVETPIL-ASVAGGAVARPFQTSATEFPDRPLSLRIAPELWL 293

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           + L+  GFD+ F+I P FR+E       P EF   +   +F + + ++   E+   G+
Sbjct: 294 KRLVVGGFDKVFEIGPSFRNEGLDKTHNP-EFTTCEFYHAFADLETLITLTESFFTGL 350



 Score = 40.4 bits (93), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +A Q G+PP GG   G+DR+ ML  GAK + +V  F
Sbjct: 522 QALQWGLPPTGGWGCGVDRLCMLFTGAKRIGDVLSF 557


>gi|315186351|gb|EFU20112.1| asparaginyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 482

 Score = 45.4 bits (106), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 102/271 (37%), Gaps = 48/271 (17%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V + GWV  VR    + FL + D         +  +    +    R E   C++ L 
Sbjct: 43  GQKVEVLGWVRSVRESKQVAFLHLSD--------GSTTAPLQVVVDKTREELASCLETLR 94

Query: 78  MSRSAE---TINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYP-ESIRFKYRFLD 132
              S     T+  +  T Q +E+ A+ + +L  A E         +YP +  R  + FL 
Sbjct: 95  TGASVRVVGTLRPSPGTKQPVEIHAEALTVLGPAPE---------DYPLQKKRHSFEFL- 144

Query: 133 LRRDTLHKNIVKRTRIINS-MRCR----------MIAENFIECSTPILTASSPEGA---- 177
             R+  H  +  RT  I + MR R               F+   TPI+T    EGA    
Sbjct: 145 --REIAH--LRPRTNTIGAVMRVRNTLAWEIHRFFQERGFLYVHTPIITTGDAEGAGALF 200

Query: 178 RDFLVPSRVN---QGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           R   +P          F+  P       Q +    A  F   +   P FR E+  + R  
Sbjct: 201 RVTTLPPDAPYDPTEDFFGAPAFLTVSGQLEAEAYALAFVNVYTFGPTFRAENSHTPRHL 260

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            EF+ ++ EM+F + +  ++  E  +  + E
Sbjct: 261 AEFWMVEPEMAFCDLEGDMHLAEEFITHLLE 291



 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 14/87 (16%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPHGG 538
           LV    EI  G  R    E +L     +G+  E  +      R+GG          PH G
Sbjct: 399 LVPRLGEIIGGSQREDDYERLLARMQELGMRIEAYQWYLDLRRYGGA---------PHAG 449

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMS 565
              G DR+V  + G +N+R+V  FP +
Sbjct: 450 FGLGFDRLVQYVTGMQNIRDVIPFPRT 476


>gi|260886923|ref|ZP_05898186.1| lysine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260863352|gb|EEX77852.1| lysine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 216

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+VMLL  + ++R+V  FP
Sbjct: 165 AMEYGLPPTGGLGIGIDRLVMLLTDSSSIRDVLFFP 200


>gi|160935859|ref|ZP_02083233.1| hypothetical protein CLOBOL_00752 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441101|gb|EDP18818.1| hypothetical protein CLOBOL_00752 [Clostridium bolteae ATCC
           BAA-613]
          Length = 463

 Score = 45.4 bits (106), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 57/305 (18%), Positives = 115/305 (37%), Gaps = 51/305 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           + + GWV  +R      F+ + D   +   Q+V +     F E++K      +L    LV
Sbjct: 21  INVGGWVRSLRDSKAFGFIVVSDGSFFETLQIVYHDTLPNFAEVSKLSVGTAILVKGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A ++ +   +     P+  +R   E +R     L  R +T
Sbjct: 81  STPQAKQ--------PFEIQAAEVTVEGTSSP-DYPLQKKRHSLEYLR-TISHLRARTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+ +  ++       +F+   TP++T S  EGA +    + ++  +     + 
Sbjct: 131 FQAVFRVRSLVAYAIHQYFQERDFVYVHTPLITGSDCEGAGEMFQVTTMDLNNIPKTEEG 190

Query: 198 PQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              + Q                    A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 191 KVDFSQDFFGKATNLTVSGQLNAETYAMAFRNVYTFGPTFRAENSNTTRHAAEFWMIEPE 250

Query: 241 MSFVEQDDILNTMENVLRGV--------------FEEFSNG-------NTVSNNFLRICY 279
           M+F + DD +   E +L+ +              F +F +        N +++ F R+ Y
Sbjct: 251 MAFADLDDDMCLAEGMLKYIIRFVLEHAPEEMNFFNQFVDKGLLDRLHNVLNSEFGRVTY 310

Query: 280 DDAIR 284
            +A++
Sbjct: 311 TEAVK 315



 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G   H G   G +R VM L G  N+R+V  FP + N C+L
Sbjct: 422 KYGSTRHAGFGLGFERCVMYLTGMSNIRDVIPFPRTVNNCEL 463


>gi|290473609|ref|YP_003466479.1| putative lysyl-tRNA synthetase with Class II aaRS and biotin
           synthetase domains [Xenorhabdus bovienii SS-2004]
 gi|289172912|emb|CBJ79683.1| putative lysyl-tRNA synthetase with Class II aaRS and biotin
           synthetase domains [Xenorhabdus bovienii SS-2004]
          Length = 325

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 27/39 (69%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L +A + GMP   G+A G+DR++ML LGA+ + EV  FP
Sbjct: 283 LLKALEHGMPECAGVALGVDRLIMLALGAERISEVIAFP 321


>gi|156842328|ref|XP_001644532.1| hypothetical protein Kpol_1052p21 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115177|gb|EDO16674.1| hypothetical protein Kpol_1052p21 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 591

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 88/178 (49%), Gaps = 9/178 (5%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRI 148
           G+I +  ++IE+L+     LP   FG ++  +  R++ R+LDL   +D   +  + R++I
Sbjct: 198 GEISVFVERIELLTPCLHMLPADHFGFKD--QETRYRKRYLDLIMNKDARGR-FITRSKI 254

Query: 149 INSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I+ +R  +   +FIE  TP++   +    A+ F+          Y +  AP+ + + L+ 
Sbjct: 255 ISYIRKFLDERSFIEVETPMMNVIAGGATAKPFVTHHNDLDMDMY-MRIAPELFLKELVV 313

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
            G DR ++I   FR+E       P EF   +   ++ +  D+++  E +   + +E +
Sbjct: 314 GGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTELLFSEMVKEIT 370



 Score = 44.3 bits (103), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  +  +REV LFP
Sbjct: 540 ALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLFP 575


>gi|225028942|ref|ZP_03718134.1| hypothetical protein EUBHAL_03232 [Eubacterium hallii DSM 3353]
 gi|224953717|gb|EEG34926.1| hypothetical protein EUBHAL_03232 [Eubacterium hallii DSM 3353]
          Length = 460

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 104/284 (36%), Gaps = 30/284 (10%)

Query: 21  VRLSGWVHRVR--PHGGIIFLDIRDHYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V+L GW+  +R   H G + L     +   QVV       F EI+K      V+    LV
Sbjct: 18  VKLGGWIRSIRGSKHFGFLVLHDGTFFKPIQVVYEEKLENFQEISKMNVGAAVIVEGTLV 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A  +  L  A     P+  +R   E +R     L  R +T
Sbjct: 78  PTPQAKQ--------PFEIQAATV-TLEGASAPDYPLQKKRHSLEYLR-TISHLRPRTNT 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS------- 190
                  R+    ++        F+   TP++TAS  EGA +    + ++  +       
Sbjct: 128 FQAVFRIRSMAAYAIHQFFQERGFVYVHTPLITASDCEGAGEMFQVTTLDLNNIPKDKEG 187

Query: 191 -------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+  P       QL     A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 188 NVDFAQDFFNKPTNLTVSGQLNAETFAQAFRNTYTFGPTFRAENSNTARHAAEFWMIEPE 247

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           M+F +  D +   E +L+ V            +FL    D  ++
Sbjct: 248 MAFADLKDDMEVAEAMLKYVISYVMENAPEEMDFLNQFVDKGLK 291



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E++ +    VG+ +E    ++       + G   H G   G +R VM 
Sbjct: 383 EIIGGSQREDDYEMLKKRMEEVGLDEE----KYQFYLDLRKYGSTHHSGFGLGFERCVMY 438

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+   FP + N C+L
Sbjct: 439 LTGISNIRDAIPFPRTVNNCEL 460


>gi|160933834|ref|ZP_02081222.1| hypothetical protein CLOLEP_02696 [Clostridium leptum DSM 753]
 gi|156867711|gb|EDO61083.1| hypothetical protein CLOLEP_02696 [Clostridium leptum DSM 753]
          Length = 470

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 102/265 (38%), Gaps = 33/265 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRD---HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
           G  V + GWV  +R    + F+++ D     G+  V  +     F EIAK       L +
Sbjct: 24  GKKVTVCGWVRTIRDSKALGFMELNDGSCFKGVQVVFEDKKIDNFKEIAK-------LNV 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP-LPVFGEREYPESIRFKYRFLD 132
            G  ++ + E +         EL A   EIL      P  P+  +R   E +R     L 
Sbjct: 77  -GAAVTVNGEFVETPQAKQSFELHA--CEILVEGPSSPEYPLQKKRHSLEYLR-TIAHLR 132

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV--------PS 184
            R +T       R+     +        FI   TPILT S  EGA +           P 
Sbjct: 133 PRANTFSAAFRVRSAAAFGIHKFFQERGFIYAHTPILTGSDCEGAGEMFTATTLDLEDPP 192

Query: 185 RVNQG------SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           R   G       F+    +     QL    MA  F + +   P FR E   + R   EF+
Sbjct: 193 RGEDGRIDFSQDFFEKHTSLTVSGQLEAECMAMAFGKVYTFGPTFRAEKSYTQRHAAEFW 252

Query: 236 QLDMEMSFVEQDDILNTMENVLRGV 260
            ++ E++F + +D ++   ++++ V
Sbjct: 253 MIEPEIAFADLNDDMDLARDMMKYV 277


>gi|71281666|ref|YP_269306.1| asparaginyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|123761018|sp|Q481G3|SYN_COLP3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|71147406|gb|AAZ27879.1| asparaginyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 466

 Score = 45.4 bits (106), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 56/275 (20%), Positives = 107/275 (38%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V   + + GW+   R    GI FL + D             +CF+  +++         S
Sbjct: 16  VNESITIHGWIRTRRDSKAGISFLALHD------------GSCFDAIQAIVPNELDNYES 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           + +    G  +  +   + +       E+ A ++E+L   E+    P+  +R    SI F
Sbjct: 64  DVLKLTTGCSVKVTGILVESPGKGQAFEIQATEVEVLGFVEDPDTYPMAAKRH---SIEF 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++   + ++ +   STP++T S  EGA +    S
Sbjct: 121 LREQAHLRPRTNIGGAVTRVRNCLAQAVHRFLHSKGYFWISTPLITGSDCEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +     +    Y +        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMENLPRNDEGKVDYNKDFFGKETFLTVSGQLNVETYCNALSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F +  D  +  E +L+ VF+
Sbjct: 241 TRHLAEFWMVEPEIAFADLSDAADLAEEMLKYVFK 275


>gi|320104601|ref|YP_004180192.1| asparaginyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319751883|gb|ADV63643.1| asparaginyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 471

 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 126/328 (38%), Gaps = 61/328 (18%)

Query: 6   THSCGDL--GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVA--NPDSAC 58
           +HS  DL  G     S V + GW+   R    G+ FL + D   +   QVVA  N  +  
Sbjct: 4   SHSIHDLLAGRVPFESSVTVQGWIRTRRDSKAGLSFLHVSDGSCFAPIQVVAPANLPNYT 63

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEEL-PLPVFG 116
            E+ +      V+    LV S+           GQ  E+ A +IE++   E+    PV  
Sbjct: 64  TEVVRLTTGCAVIAHGKLVPSQG---------KGQTHEIQADRIEVVGWVEDPDTYPVSA 114

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRC-RMIAE-NFIECSTPILTASSP 174
           +    E +R       LR  T     V R R   SM   R   E  F    TPI+T+S  
Sbjct: 115 KHHTFEYLR---TVAHLRPRTNTFGAVARVRHCLSMAVHRFFHERGFFWVHTPIITSSDC 171

Query: 175 EGA--------RDFLVPSRVNQGS------FYALPQAPQQYKQLLMAS---GFDRYFQIA 217
           EGA         D   P R  QG       F+  P       QL + +      + +   
Sbjct: 172 EGAGEMFKVSTLDLNNPPRDAQGQIDHSQDFFGKPAHLTVSGQLNVEAYCLALSKVYTFG 231

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL----RGVFEEFSNG------ 267
           P FR E+  + R   EF+ ++ E++F +     +  E  L    R V EE ++       
Sbjct: 232 PTFRAENSNTTRHLAEFWMIEPEVAFADLATNADLAEEFLKYLFRAVLEERADDLAFFAD 291

Query: 268 ----------NTVSN-NFLRICYDDAIR 284
                      T++N  F R+ Y +AIR
Sbjct: 292 RIDKQCVNRLETLTNAQFERMDYAEAIR 319


>gi|308186276|ref|YP_003930407.1| asparaginyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308056786|gb|ADO08958.1| asparaginyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 466

 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 106/275 (38%), Gaps = 46/275 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V S V + GWV R R          RD       +A  D +CF   ++V +  +      
Sbjct: 16  VDSEVTVRGWV-RTR----------RDSKAGLSFIAVYDGSCFNPVQAVVNNSLNNYQDE 64

Query: 77  VMSRSAETINANIITGQIELS---AQKIEILSVAEELPLPVFGEREYP-----ESIRFKY 128
           V+  +  T  + I+TG++  S    Q  EI + + E+   V     YP      SI +  
Sbjct: 65  VLRLT--TGCSVIVTGKVVASPGQGQAFEIQATSLEVVGWVEDPDSYPMAAKRHSIEYLR 122

Query: 129 RFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRV 186
               LR  T     V R R  +     R   EN +   STP++TAS  EGA +     RV
Sbjct: 123 EVAHLRPRTNLIGAVARVRHTLAQALHRFFHENGYFWVSTPLITASDTEGAGEMF---RV 179

Query: 187 NQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +      LP+  Q                    Q      AS   + +   P FR E+  
Sbjct: 180 STLDMENLPRNDQGKVDFSEDFFGKEAFLTVSGQLNGETYASALSKIYTFGPTFRAENSN 239

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + R   EF+ L+ E++F   DD     E +L+ VF
Sbjct: 240 TSRHLAEFWMLEPEIAFASLDDAAALAEAMLKYVF 274


>gi|152984795|ref|YP_001346822.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|166229817|sp|A6V187|SYK_PSEA7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|150959953|gb|ABR81978.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 501

 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 15/174 (8%)

Query: 125 RFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
           R++ R++DL    +T H   V R+++I  +R  +    F+E  TP+L T      A+ F 
Sbjct: 162 RYRQRYVDLMVNEETRHTFRV-RSQVIAHIRRFLSERGFLEVETPMLQTIPGGAAAKPFE 220

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                   + + L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  L+   
Sbjct: 221 THHNALDMAMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP-EFTMLEFYQ 278

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286
           ++ + +D ++  E + R + +       V            F+R+   D+I +Y
Sbjct: 279 AYADYEDNMDLTEELFRELAQAVLGSTDVPYGDKVFHFGEPFVRLSVYDSILKY 332



 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 460 ALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFP 495


>gi|145634751|ref|ZP_01790459.1| lysyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|229844704|ref|ZP_04464843.1| lysyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|145267917|gb|EDK07913.1| lysyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|229812418|gb|EEP48108.1| lysyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 323

 Score = 45.4 bits (106), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           KN++KR +II  +R        +E  TP+L+            + +FL P   NQ     
Sbjct: 14  KNLLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFD-NQSKTLW 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI+  FR+E+   +R   EF  L+          ++N +
Sbjct: 73  LSTSPEYHMKRLLAAGSGPIFQISKVFRNEEA-GNRHNPEFTMLEWYRPHFHMHRLINEV 131

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 132 DDLLQQILD 140



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 10/122 (8%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL----VCNGF-EIASGGIRNHMSE 502
           +E+ I   H P T  Q  +  +   D    + F++      + NGF E+A    + H  E
Sbjct: 204 KERPIAVYHFPST--QAALAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFE 261

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  F
Sbjct: 262 LDNQQRQKCELPTREIDERFLA---ALEEGMPDTSGVALGIDRLMMIALDCEKINDVISF 318

Query: 563 PM 564
            M
Sbjct: 319 AM 320


>gi|291613966|ref|YP_003524123.1| lysyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291584078|gb|ADE11736.1| lysyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 500

 Score = 45.4 bits (106), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 459 RALEYGLPPTAGEGIGIDRLVMLLTDSASIRDVILFP 495



 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 12/154 (7%)

Query: 91  TGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRI 148
           +G++ +   ++ +L+ A   LP    G  +  +  +++ R+LDL   +   K  + RT+I
Sbjct: 129 SGELSVRVTQVRLLTKALRPLPEKFHGLTDMEQ--KYRQRYLDLITNEQSRKVFIARTQI 186

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
           I ++R   +   ++E  TP++    P GA  + F+          Y L  AP+ Y + L+
Sbjct: 187 IQAIREFFVRHGYLEVETPMMH-PIPGGASAKPFVTHHNALDLQMY-LRIAPELYLKRLV 244

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPG----EFYQ 236
             GF++ F++   FR+E   +   P     EFY+
Sbjct: 245 VGGFEKVFEVNRNFRNEGVSTRHNPEFTMIEFYE 278


>gi|213389871|gb|ACJ45998.1| putative asparaginyl tRNA synthetase [Palm lethal yellowing
           phytoplasma]
          Length = 471

 Score = 45.4 bits (106), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 109/271 (40%), Gaps = 52/271 (19%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSA----CFEIAKSVRSEWVLCIDGL 76
           ++GW+   R    I F+D+ D   I   QVV   +S       +I ++++    +C++G+
Sbjct: 26  VNGWIKNCRFQKEIFFIDLNDGSFIEDLQVVYKNNSKNNIDLKKIKENLQIGAAVCVEGI 85

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER---EYP-----ESIRFKY 128
           ++           I    EL + KI            +F E+   +YP      S  F  
Sbjct: 86  LVPNFK-------IKSNFELLSSKI------------IFLEKNVNDYPIQPKNHSKIFLR 126

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGARD-FLVPS- 184
           +   LR  T     V R R   S         E F+   TPI+T S  EGA + F V S 
Sbjct: 127 QIAHLRLRTKLFGAVFRIRNSVSFFIHEFFQKEGFLYAHTPIITTSDGEGAGELFKVTSL 186

Query: 185 ---RVN---------QGSFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDR 229
              ++N         +  F+A P       QL     A  F + +   P FR E+  + R
Sbjct: 187 DLAKINLNEEKKIDYKKDFFAQPTFLTVTGQLEGEAFAMAFSKIYTFGPTFRAENSNTPR 246

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
              EF+ ++ EM+F +    +   +N+++ V
Sbjct: 247 HISEFWMIEPEMAFCDLQQNIIVAQNLIQYV 277


>gi|20987993|gb|AAH30041.1| Nars2 protein [Mus musculus]
          Length = 250

 Score = 45.4 bits (106), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 22/100 (22%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE-- 262
           M+  F + F   P FR E+ +S R   EFY ++ E+SFVE   D++  ME + +   E  
Sbjct: 1   MSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEISFVESLQDLMQVMEELFKATTEMV 60

Query: 263 ------------EFSNG-------NTVSNNFLRICYDDAI 283
                       +F          + + NNFL I Y +AI
Sbjct: 61  LSHCPEDVELCHQFIAAGQKGRLEHMLKNNFLIISYTEAI 100



 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 6/90 (6%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  E+  G +R     V+ Q  +  G++K     ++    R F  G  PHGG   
Sbjct: 166 DLLVPGVGELFGGSLREERYHVLEQRLARSGLTKAY---QWYLDLRKF--GSVPHGGFGM 220

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R +  +LG  N+++V  FP   + C L
Sbjct: 221 GFERYLQCILGVDNIKDVIPFPRFTHSCLL 250


>gi|213964227|ref|ZP_03392460.1| asparaginyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213953117|gb|EEB64466.1| asparaginyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 476

 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 53/262 (20%), Positives = 107/262 (40%), Gaps = 32/262 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV   R +    F+ + D   I   QVV + ++   +I K + +   + + G ++
Sbjct: 18  ITLKGWVRTFRSNR---FIALNDGSTIDNLQVVVDFENTNPDILKRITTGAAIEVKGKLV 74

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
               +        GQ +EL A ++ IL  +     P+  ++   E +R +   L +R +T
Sbjct: 75  ESQGK--------GQSVELQATEVVILGDSNPEEYPIQPKKHSLEFLR-ENAHLRVRSNT 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R+ +  ++        F   +TPI+T S  EGA +    + ++  +       
Sbjct: 126 FSAVMRVRSTLAFAIHKYFQDNGFFYVNTPIITGSDAEGAGEMFRVTTLDAKNPPLTENG 185

Query: 198 PQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              YK+                    A    + +   P FR E+  + R   EF+ ++ E
Sbjct: 186 EVDYKKDFFGRETNLTVSGQLEGETFAMALGKIYTFGPTFRAENSNTSRHLAEFWMIEPE 245

Query: 241 MSFVEQDDILNTMENVLRGVFE 262
           M+F +  D ++  E+ ++ V +
Sbjct: 246 MAFYDLIDNMDLAEDFIKYVLK 267


>gi|116051697|ref|YP_789464.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296387793|ref|ZP_06877268.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
 gi|313109106|ref|ZP_07795078.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|122260840|sp|Q02RH2|SYK_PSEAB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|115586918|gb|ABJ12933.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310881580|gb|EFQ40174.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 501

 Score = 45.4 bits (106), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 15/174 (8%)

Query: 125 RFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
           R++ R++DL    +T H   V R+++I  +R  +    F+E  TP+L T      A+ F 
Sbjct: 162 RYRQRYVDLMVNEETRHTFRV-RSQVIAHIRRFLSERGFLEVETPMLQTIPGGAAAKPFE 220

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                   + + L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  L+   
Sbjct: 221 THHNALDMAMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP-EFTMLEFYQ 278

Query: 242 SFVEQDDILNTMENVLRGVFE------EFSNGNTV---SNNFLRICYDDAIRRY 286
           ++ + +D ++  E + R + +      +   G+ V      F+R+   D+I +Y
Sbjct: 279 AYADYEDNMDLTEELFRELAQAVLGTTDVPYGDKVFHFGEPFVRLSVFDSILKY 332



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 460 ALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFP 495


>gi|145632195|ref|ZP_01787930.1| lysyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144987102|gb|EDJ93632.1| lysyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 323

 Score = 45.1 bits (105), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           KN++KR +II  +R        +E  TP+L+            + +FL P   NQ     
Sbjct: 14  KNLLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFD-NQSKTLW 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI+  FR+E+   +R   EF  L+          ++N +
Sbjct: 73  LSTSPEYHMKRLLAAGSGPIFQISKVFRNEEA-GNRHNPEFTMLEWYRPHFHMHRLINEV 131

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 132 DDLLQQILD 140



 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 10/122 (8%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL----VCNGF-EIASGGIRNHMSE 502
           +E+ I   H P T  Q  +  +   D    + F++      + NGF E+A    + H  E
Sbjct: 204 KERPIAVYHFPST--QAALAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFE 261

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +  Q      +  + ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  F
Sbjct: 262 LDNQQRQKCELPTQEIDERFLA---ALEEGMPDTSGVALGIDRLMMIALDCEKINDVISF 318

Query: 563 PM 564
            M
Sbjct: 319 AM 320


>gi|86135226|ref|ZP_01053808.1| asparaginyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85822089|gb|EAQ43236.1| asparaginyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 477

 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 55/281 (19%), Positives = 106/281 (37%), Gaps = 42/281 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GWV   R +    F+ + D   I   Q V + ++   E  K + +   + I G ++
Sbjct: 19  VHVKGWVRTFRSNR---FIALNDGSTIKNIQCVIDFENTAEETLKRITTGAAIAIKGTIV 75

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                        GQ +E+    IEIL  +     P+  ++   E +R +   L +R +T
Sbjct: 76  ESQGR--------GQRVEIQVADIEILGDSNPDEYPIQPKKHSFEFLR-ENAHLRMRTNT 126

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R+++  ++        F   +TPI+T S  EGA +    +             
Sbjct: 127 FSAVMRVRSKLSFAVHKYFQENGFNYVNTPIITGSDAEGAGEMFRVTNFEDNKAPVTEDG 186

Query: 198 PQQYKQLL-----------------MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              Y +                    A    + +   P FR E+  + R   EF+ ++ E
Sbjct: 187 KIDYSKDFFGKETNLTVSGQLEAETFAMSLGKAYTFGPTFRAENSNTTRHLAEFWMIEPE 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
           ++F++ D  ++  E+ ++ V +          + L  C DD
Sbjct: 247 VAFMDLDGNMDLAEDFIKSVLK----------DVLETCKDD 277


>gi|15598896|ref|NP_252390.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|38258401|sp|Q9HXU0|SYK_PSEAE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|9949865|gb|AAG07088.1|AE004789_8 lysyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
          Length = 501

 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 15/174 (8%)

Query: 125 RFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
           R++ R++DL    +T H   V R+++I  +R  +    F+E  TP+L T      A+ F 
Sbjct: 162 RYRQRYVDLMVNEETRHTFRV-RSQVIAHIRRFLSERGFLEVETPMLQTIPGGAAAKPFE 220

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                   + + L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  L+   
Sbjct: 221 THHNALDMAMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP-EFTMLEFYQ 278

Query: 242 SFVEQDDILNTMENVLRGVFE------EFSNGNTV---SNNFLRICYDDAIRRY 286
           ++ + +D ++  E + R + +      +   G+ V      F+R+   D+I +Y
Sbjct: 279 AYADYEDNMDLTEELFRELAQSVLGTTDVPYGDKVFHFGEPFVRLSVFDSILKY 332



 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 460 ALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFP 495


>gi|57234352|ref|YP_181595.1| lysyl-tRNA synthetase-related protein [Dehalococcoides ethenogenes
           195]
 gi|57224800|gb|AAW39857.1| lysyl-tRNA synthetase-related protein [Dehalococcoides ethenogenes
           195]
          Length = 309

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 7/90 (7%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFY 192
           R   L  N+ +R +I+  +R     + F+E  TP+   A +PE    ++ P     G   
Sbjct: 8   RLGKLEDNLKRRMQILGWIRSFFNEQGFLEVETPVFVPAVAPER---YIKPVECQSGY-- 62

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
            L  +P+ Y + ++A+G+ + +QI+ CFRD
Sbjct: 63  -LSTSPELYMKRMLAAGYAKIYQISRCFRD 91


>gi|154505525|ref|ZP_02042263.1| hypothetical protein RUMGNA_03062 [Ruminococcus gnavus ATCC 29149]
 gi|153794183|gb|EDN76603.1| hypothetical protein RUMGNA_03062 [Ruminococcus gnavus ATCC 29149]
          Length = 463

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 62/309 (20%), Positives = 115/309 (37%), Gaps = 61/309 (19%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + GW+  +R      F           +V N D + FE  + V  + +   D +    
Sbjct: 21  VTVGGWIRSIRDSKTFGF-----------IVVN-DGSYFEPLQVVYHDKMENFDEISRQN 68

Query: 81  SAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYP-ESIRFKYRFLDL----- 133
               I   I+TG +  + Q  +   + A+E+ +      +YP +  R  + +L       
Sbjct: 69  VGAAI---IVTGTLVATPQAKQPFEIQADEVTVEGASAPDYPLQKKRHSFEYLRTISHLR 125

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VP 183
            R +T       R+ I  ++        F+   TP++T S  EGA +           VP
Sbjct: 126 PRTNTFQAVFRVRSMIAYAIHQFFQERGFVYVHTPLITGSDCEGAGEMFQVTTLDLKDVP 185

Query: 184 SRVNQGSFYALP--------QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
              +    Y+              Q      A  F   +   P FR E+  + R   EF+
Sbjct: 186 KSADGSIDYSKDFFGKETNLTVSGQLNGETFAQAFRSIYTFGPTFRAENSNTTRHAAEFW 245

Query: 236 QLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNF 274
            ++ E++F + +D ++  E++L+ V              F  F +        N V+++F
Sbjct: 246 MIEPEIAFADLEDNMDLAESMLKYVISYVLENAPEEMNFFNSFVDKGLLDRLNNVVNSDF 305

Query: 275 LRICYDDAI 283
            R+ Y +A+
Sbjct: 306 ARVTYTEAV 314



 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G   H G   G +R VM L G  N+R+V  FP + N CDL
Sbjct: 422 KYGSTRHAGFGLGFERCVMYLTGMSNIRDVIPFPRTVNNCDL 463


>gi|107103214|ref|ZP_01367132.1| hypothetical protein PaerPA_01004283 [Pseudomonas aeruginosa PACS2]
 gi|218890023|ref|YP_002438887.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|254236610|ref|ZP_04929933.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|254242395|ref|ZP_04935717.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|226736753|sp|B7V0Z5|SYK_PSEA8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|126168541|gb|EAZ54052.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|126195773|gb|EAZ59836.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|218770246|emb|CAW26011.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 501

 Score = 45.1 bits (105), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 15/174 (8%)

Query: 125 RFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
           R++ R++DL    +T H   V R+++I  +R  +    F+E  TP+L T      A+ F 
Sbjct: 162 RYRQRYVDLMVNEETRHTFRV-RSQVIAHIRRFLSERGFLEVETPMLQTIPGGAAAKPFE 220

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                   + + L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  L+   
Sbjct: 221 THHNALDMAMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP-EFTMLEFYQ 278

Query: 242 SFVEQDDILNTMENVLRGVFE------EFSNGNTV---SNNFLRICYDDAIRRY 286
           ++ + +D ++  E + R + +      +   G+ V      F+R+   D+I +Y
Sbjct: 279 AYADYEDNMDLTEELFRELAQAVLGTTDVPYGDKVFHFGEPFVRLSVFDSILKY 332



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 460 ALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFP 495


>gi|260655067|ref|ZP_05860555.1| lysine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260630178|gb|EEX48372.1| lysine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 507

 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF------GGLYRAFQCGMP 534
           +++L C G E+A+G   + +++ + Q    +   K+  E              A + G+P
Sbjct: 409 RFELFCCGKELANG--YSELNDPVDQKARFIDQMKKKSEGEDETHPYDADFVEALEQGLP 466

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG+  G+DR++M L  +K++R+V  FP
Sbjct: 467 PTGGLGIGMDRVIMFLTNSKSIRDVIFFP 495


>gi|120434466|ref|YP_860168.1| asparaginyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117576616|emb|CAL65085.1| asparaginyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 480

 Score = 45.1 bits (105), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 53/260 (20%), Positives = 106/260 (40%), Gaps = 31/260 (11%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + GWV   R +    F+ I D   I   Q V + ++   ++ K +     + + G +   
Sbjct: 21  VKGWVRSFRSNR---FIAINDGSTIKNLQCVIDFENTDEDLIKRINVGAAISVKGTLKES 77

Query: 81  SAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                       ++E+   +++IL  A  EE+ L +   +++      +   L +R +T 
Sbjct: 78  QGSQ-------QRVEVDVTELKILGDANPEEVKLTILSPKKHSLEKLREQAHLRVRTNTF 130

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVPSRVNQGS 190
              +  R+++  ++      +NF   +TPI+T S  EGA         D   P +   GS
Sbjct: 131 GAVMRVRSKLSFAVHKYFQEKNFYYVNTPIITGSDAEGAGEMFRVSALDMKNPPKNEDGS 190

Query: 191 ------FYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 F+          Q +    A G  + +   P FR E+  + R   EF+ ++ E+
Sbjct: 191 INYKEDFFGKETNLTVSGQLEAETFALGLGQVYTFGPTFRAENSNTSRHLAEFWMIEPEV 250

Query: 242 SFVEQDDILNTMENVLRGVF 261
           +F + D  ++  E+ ++ V 
Sbjct: 251 AFCDLDQNMDLAEDFIKYVL 270


>gi|225563051|gb|EEH11330.1| lysyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 545

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 4/118 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYK 202
           R+ II  +R   +  +F+E  TPIL AS   GA  R F   +        +L  AP+ + 
Sbjct: 213 RSSIIQYIRIFFLDRSFMEVETPIL-ASVAGGAVARPFQTSATEFPDRPLSLRIAPELWL 271

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           + L+  GFD+ F+I P FR+E       P EF   +   +F + + ++   E+   G+
Sbjct: 272 KRLVVGGFDKVFEIGPSFRNEGLDKTHNP-EFTTCEFYHAFADLETLITLTESFFTGL 328



 Score = 40.4 bits (93), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +A Q G+PP GG   G+DR+ ML  GAK + +V  F
Sbjct: 500 QALQWGLPPTGGWGCGVDRLCMLFTGAKRIGDVLSF 535


>gi|94500573|ref|ZP_01307104.1| lysyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94427363|gb|EAT12342.1| lysyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 311

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 5/91 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS-NVGISKEVVENRFGGLY--RAFQCGMPP 535
           A +++L  NG E+A+G   + + +V  Q    +V   K   E R    Y  +A   G+P 
Sbjct: 222 AKRFELYVNGLELANG--YDELVDVQEQKSRFDVEAKKREHEQRVDDEYFLQALASGLPD 279

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             G+A G+DRI+ML LG  N+ +V  F  S+
Sbjct: 280 CSGVAIGLDRILMLKLGLSNISDVLSFDFSR 310


>gi|171682338|ref|XP_001906112.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941128|emb|CAP66778.1| unnamed protein product [Podospora anserina S mat+]
          Length = 619

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 120/274 (43%), Gaps = 26/274 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIR---DHYGI---------TQVVANPDSACF 59
           G  D  + +R++  ++  R  G  +IF D+R   D   I          Q+VA    +  
Sbjct: 121 GEDDKNTEIRIAARIYNKRASGSKLIFYDVRTSADTKSIGTQIQIVCQAQLVAEGAPSFE 180

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----F 115
           +  +++R   V+ I G     + +   A    G++ + A +I++LS    + LP     F
Sbjct: 181 QQHENIRRGDVIGIIGYAGRTNPKNRLAEGKEGELSIFATEIKLLSPCLHM-LPSVRFPF 239

Query: 116 GEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
            + E     R + R+LD L  D   + + +R+R++  +R       FIE  TP++ A + 
Sbjct: 240 ADAEQ----RARMRYLDMLWNDRSRETLWQRSRMVRYIRDFFHERRFIEVETPMMHAIAG 295

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A  F+          Y +  AP+ + + ++   F + F++   FR+E       P E
Sbjct: 296 GATALPFITHHNDLDIDMY-MRVAPELFLKKMIVGQFGKVFEMGKNFRNEGVDLTHNP-E 353

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
           F  ++   ++ +  D++N  E ++  + +  + G
Sbjct: 354 FTSIEFYWAYADMYDLMNITEELVSSLVKHLTGG 387



 Score = 40.4 bits (93), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L    ++REV  FP
Sbjct: 553 ALEYGLPPTGGWGLGIDRLAMFLTNNYSIREVLAFP 588


>gi|86605053|ref|YP_473816.1| lysyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|86553595|gb|ABC98553.1| lysyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 508

 Score = 45.1 bits (105), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 89/191 (46%), Gaps = 18/191 (9%)

Query: 92  GQIELSAQKIEILSVAEELPLP--VFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRI 148
           G++ +   + ++L+ A  LPLP    G R+  +  R++ R++DL     + + ++ R +I
Sbjct: 132 GELSVRVDEYQVLTKAL-LPLPDKWHGLRDVEK--RYRQRYVDLIVNPEVKQTLLDRAKI 188

Query: 149 INSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
           + S+R  +    F+E  TP+L    P G  AR F+          Y L  A + + + L+
Sbjct: 189 VRSLRQTLEERGFVEIETPVLQV-IPGGAEARPFITHHNALDLDLY-LRIATELHLKRLV 246

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV-------LRG 259
             G +R ++I   FR+E   +   P EF  L+   +F +   ++   E +       +RG
Sbjct: 247 VGGIERVYEIGRVFRNEGISTRHNP-EFTSLEAYQAFADYHTMMELTEALVCNAALAVRG 305

Query: 260 VFEEFSNGNTV 270
             +    G T+
Sbjct: 306 SLQITYQGETI 316



 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G+PP GG+  GIDR+ MLL  A ++R+V  FP+
Sbjct: 463 ALEYGLPPTGGLGIGIDRLAMLLCDAASIRDVIAFPL 499


>gi|15617172|ref|NP_240385.1| lysyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|11135234|sp|P57642|SYK3_BUCAI RecName: Full=Uncharacterized protein YjeA
 gi|25528943|pir||G84997 lysine-tRNA ligase (EC 6.1.1.6) [imported] - Buchnera sp.  (strain
           APS)
 gi|10039237|dbj|BAB13271.1| hypothetical lysyl-tRNA synthetase homolog [Buchnera aphidicola
           str. APS (Acyrthosiphon pisum)]
          Length = 324

 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   G+PP  G+A G+DR++ML+L  K++ EV  FP+ +
Sbjct: 285 ALSYGLPPCSGVAIGLDRLIMLILNKKSIHEVIAFPVDR 323



 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 21/182 (11%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR------DFLVPSRVNQGSFYA 193
           ++++KR+ II+++R     +N +E  TPIL+ S+           +++    +++   + 
Sbjct: 13  EDLIKRSNIISNIRLFFSKKNILEVETPILSRSTVTDVHLTSFETNYISSDNIDELKLW- 71

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+AS     +QI   FR+++      P EF  L+    F      +  +
Sbjct: 72  LTTSPEYHMKRLLASESGSIYQICHSFRNKEIGRYHNP-EFTMLEWYQPFCSMKKFIKEI 130

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT-----EHFVH 308
           +  L+ + +         N   ++ Y D    +    P   N + +H ++     +H  H
Sbjct: 131 DIFLQIILK--------CNKSDKVSYQDLFIDFLKIDPLCTNLLELHQISKKLKLDHLTH 182

Query: 309 SE 310
           SE
Sbjct: 183 SE 184


>gi|331703080|ref|YP_004399767.1| Lysine tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010]
 gi|328801635|emb|CBW53788.1| Lysine tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010]
          Length = 500

 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 128/289 (44%), Gaps = 19/289 (6%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDS---AC 58
           +Y+ +S  DL ++     V ++G +   R  G    F++I D     Q+    D      
Sbjct: 46  KYKDYSKEDL-LNLNQELVVVAGRIKLYREAGKKAAFVNIDDQDSSIQLYVRLDEIGDQS 104

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGE 117
           FE  ++     ++ + G++M             G++ +  +++ +LS A   LP    G 
Sbjct: 105 FEYFRNFDLGDIIGVKGIMMRTDH---------GELSIRCKEVVLLSKALRPLPDKHAGI 155

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
           ++  E  R +Y  L +  D + K    RT+II +++  +  + ++E  TPIL +      
Sbjct: 156 QDIEEKYRRRYVDLIMNHD-VRKTFQARTKIIRTLQNFLDNKGYMEVETPILHSLKGGAS 214

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F+    V     Y L  A + + + L+  GF+  ++I   FR+E   S R   EF  
Sbjct: 215 AKPFITHYNVLNTDVY-LRIATELHLKRLIVGGFEGVYEIGRIFRNEG-MSTRHNPEFTS 272

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +++ +++ +   +++  E + R      ++ + +  N ++I      +R
Sbjct: 273 IELYVAYEDMFFLMDLTEEIFRVCNAAVNSSSIIEYNNVKIDLSKPFKR 321



 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A +  MPP  GI  GIDR+VM L  ++++++V LFP
Sbjct: 459 ALEHAMPPTAGIGIGIDRLVMFLTNSESIKDVLLFP 494


>gi|311087468|gb|ADP67548.1| lysyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon
           pisum)]
          Length = 350

 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   G+PP  G+A G+DR++ML+L  K++ EV  FP+ +
Sbjct: 311 ALSYGLPPCSGVAIGLDRLIMLILNKKSIHEVIAFPVDR 349



 Score = 40.8 bits (94), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 21/182 (11%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR------DFLVPSRVNQGSFYA 193
           ++++KR+ II+++R     +N +E  TPIL+ S+           +++    +++   + 
Sbjct: 39  EDLIKRSNIISNIRLFFSKKNILEVETPILSRSTVTDVHLTSFETNYISSDNIDELKLW- 97

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+AS     +QI   FR+++      P EF  L+    F      +  +
Sbjct: 98  LTTSPEYHMKRLLASESGSIYQICHSFRNKELGRYHNP-EFTMLEWYQPFCSMKKFIKEI 156

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT-----EHFVH 308
           +  L+ + +         N   ++ Y D    +    P   N + +H ++     +H  H
Sbjct: 157 DIFLQIILK--------CNKSDKVSYQDLFIDFLKIDPLCANLLELHQISKKLKLDHLTH 208

Query: 309 SE 310
           SE
Sbjct: 209 SE 210


>gi|229529622|ref|ZP_04419012.1| asparaginyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229333396|gb|EEN98882.1| asparaginyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|327483982|gb|AEA78389.1| Asparaginyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 466

 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 67/317 (21%), Positives = 118/317 (37%), Gaps = 65/317 (20%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF   ++V         +
Sbjct: 16  VDSEVTVRGWIRTRRDSKAGISFLAIYD------------GSCFNPIQAVVPNNLNNYDN 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKIVESPASGQAFELAASDVKVVGWVEDADTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y Q        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT-------- 269
            R   EF+ ++ E++F + + +    E++L+ VF+          EF N           
Sbjct: 241 SRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARL 300

Query: 270 ---VSNNFLRICYDDAI 283
              V ++F ++ Y DAI
Sbjct: 301 EQFVDSDFAQVDYTDAI 317


>gi|161582007|ref|NP_230942.2| asparaginyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|229505118|ref|ZP_04394628.1| asparaginyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229511212|ref|ZP_04400691.1| asparaginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229518330|ref|ZP_04407774.1| asparaginyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229521407|ref|ZP_04410826.1| asparaginyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229608136|ref|YP_002878784.1| asparaginyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|255745693|ref|ZP_05419641.1| asparaginyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262159032|ref|ZP_06030144.1| asparaginyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|262169389|ref|ZP_06037081.1| asparaginyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|20139940|sp|Q9KSF9|SYN_VIBCH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|229341505|gb|EEO06508.1| asparaginyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229345045|gb|EEO10019.1| asparaginyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229351177|gb|EEO16118.1| asparaginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357341|gb|EEO22258.1| asparaginyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229370791|gb|ACQ61214.1| asparaginyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|255736768|gb|EET92165.1| asparaginyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262022202|gb|EEY40911.1| asparaginyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262029217|gb|EEY47869.1| asparaginyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 466

 Score = 45.1 bits (105), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 67/317 (21%), Positives = 118/317 (37%), Gaps = 65/317 (20%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF   ++V         +
Sbjct: 16  VDSEVTVRGWIRTRRDSKAGISFLAIYD------------GSCFNPIQAVVPNNLNNYDN 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKIVESPASGQAFELAASDVKVVGWVEDADTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y Q        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT-------- 269
            R   EF+ ++ E++F + + +    E++L+ VF+          EF N           
Sbjct: 241 SRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARL 300

Query: 270 ---VSNNFLRICYDDAI 283
              V ++F ++ Y DAI
Sbjct: 301 EQFVESDFAQVDYTDAI 317


>gi|257471632|ref|ZP_05635631.1| lysyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon
           pisum)]
          Length = 350

 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   G+PP  G+A G+DR++ML+L  K++ EV  FP+ +
Sbjct: 311 ALSYGLPPCSGVAIGLDRLIMLILNKKSIHEVIAFPVDR 349



 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 21/182 (11%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR------DFLVPSRVNQGSFYA 193
           ++++KR+ II+++R     +N +E  TPIL+ S+           +++    +++   + 
Sbjct: 39  EDLIKRSNIISNIRLFFSKKNILEVETPILSRSTVTDVHLTSFETNYISSDNIDELKLW- 97

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+AS     +QI   FR+++      P EF  L+    F      +  +
Sbjct: 98  LTTSPEYHMKRLLASESGSIYQICHSFRNKELGRYHNP-EFTMLEWYQPFCSMKKFIKEI 156

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT-----EHFVH 308
           +  L+ + +         N   ++ Y D    +    P   N + +H ++     +H  H
Sbjct: 157 DIFLQIILK--------CNKSDKVSYQDLFIDFLKIDPLCANLLELHQISKKLKLDHLTH 208

Query: 309 SE 310
           SE
Sbjct: 209 SE 210


>gi|219681923|ref|YP_002468309.1| lysyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|219682478|ref|YP_002468862.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|254782461|sp|B8D8E5|SYK3_BUCA5 RecName: Full=Uncharacterized protein YjeA
 gi|254782462|sp|B8D8A2|SYK3_BUCAT RecName: Full=Uncharacterized protein YjeA
 gi|219622211|gb|ACL30367.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|219624766|gb|ACL30921.1| lysyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|311086304|gb|ADP66386.1| lysyl-tRNA synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon
           pisum)]
 gi|311087952|gb|ADP68031.1| lysyl-tRNA synthetase [Buchnera aphidicola str. JF98 (Acyrthosiphon
           pisum)]
          Length = 324

 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   G+PP  G+A G+DR++ML+L  K++ EV  FP+ +
Sbjct: 285 ALSYGLPPCSGVAIGLDRLIMLILNKKSIHEVIAFPVDR 323



 Score = 41.2 bits (95), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 21/182 (11%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR------DFLVPSRVNQGSFYA 193
           ++++KR+ II+++R     +N +E  TPIL+ S+           +++    +++   + 
Sbjct: 13  EDLIKRSNIISNIRLFFSKKNILEVETPILSRSTVTDVHLTSFETNYISSDNIDELKLW- 71

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+AS     +QI   FR+++      P EF  L+    F      +  +
Sbjct: 72  LTTSPEYHMKRLLASESGSIYQICHSFRNKELGRYHNP-EFTMLEWYQPFCSMKKFIKEI 130

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT-----EHFVH 308
           +  L+ + +         N   ++ Y D    +    P   N + +H ++     +H  H
Sbjct: 131 DIFLQIILK--------CNKSDKVSYQDLFIDFLKIDPLCANLLELHQISKKLKLDHLTH 182

Query: 309 SE 310
           SE
Sbjct: 183 SE 184


>gi|121586541|ref|ZP_01676327.1| asparaginyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121730129|ref|ZP_01682527.1| asparaginyl-tRNA synthetase [Vibrio cholerae V52]
 gi|147673141|ref|YP_001216861.1| asparaginyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153820100|ref|ZP_01972767.1| asparaginyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153823531|ref|ZP_01976198.1| asparaginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|153830039|ref|ZP_01982706.1| asparaginyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|227081468|ref|YP_002810019.1| asparaginyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|254286606|ref|ZP_04961562.1| asparaginyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|254848419|ref|ZP_05237769.1| asparaginyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|298498613|ref|ZP_07008420.1| asparaginyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|9655785|gb|AAF94456.1| asparaginyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121549220|gb|EAX59252.1| asparaginyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121628120|gb|EAX60655.1| asparaginyl-tRNA synthetase [Vibrio cholerae V52]
 gi|126509352|gb|EAZ71946.1| asparaginyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126518955|gb|EAZ76178.1| asparaginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|146315024|gb|ABQ19563.1| asparaginyl-tRNA synthetase [Vibrio cholerae O395]
 gi|148874479|gb|EDL72614.1| asparaginyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|150423364|gb|EDN15309.1| asparaginyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|227009356|gb|ACP05568.1| asparaginyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227013214|gb|ACP09424.1| asparaginyl-tRNA synthetase [Vibrio cholerae O395]
 gi|254844124|gb|EET22538.1| asparaginyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297542946|gb|EFH78996.1| asparaginyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 481

 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 67/317 (21%), Positives = 118/317 (37%), Gaps = 65/317 (20%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF   ++V         +
Sbjct: 31  VDSEVTVRGWIRTRRDSKAGISFLAIYD------------GSCFNPIQAVVPNNLNNYDN 78

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 79  EVLKLTTGCSVEVTGKIVESPASGQAFELAASDVKVVGWVEDADTYPMAKTRH---SIEY 135

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 136 LREVAHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 195

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y Q        L  SG            + +   P FR E+  +
Sbjct: 196 TLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNT 255

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT-------- 269
            R   EF+ ++ E++F + + +    E++L+ VF+          EF N           
Sbjct: 256 SRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARL 315

Query: 270 ---VSNNFLRICYDDAI 283
              V ++F ++ Y DAI
Sbjct: 316 EQFVESDFAQVDYTDAI 332


>gi|289807098|ref|ZP_06537727.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 49

 Score = 45.1 bits (105), Expect = 0.038,   Method: Composition-based stats.
 Identities = 20/45 (44%), Positives = 29/45 (64%)

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           F  +GI+++    +FG L  A + G PPH G+A G+DR+ MLL G
Sbjct: 4   FGILGINEQEQREKFGFLLDALKYGTPPHVGLAFGLDRLTMLLTG 48


>gi|108758409|ref|YP_633718.1| putative lysyl-tRNA synthetase-related protein GenX [Myxococcus
           xanthus DK 1622]
 gi|108462289|gb|ABF87474.1| putative lysyl-tRNA synthetase-related protein GenX [Myxococcus
           xanthus DK 1622]
          Length = 346

 Score = 45.1 bits (105), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 19/34 (55%), Positives = 25/34 (73%)

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP  GIA G+DRI+MLLLG + + +V LFP  +
Sbjct: 311 MPPSAGIAVGLDRILMLLLGVQRISDVLLFPAHE 344


>gi|70925537|ref|XP_735446.1| lysine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56509114|emb|CAH78729.1| lysine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 214

 Score = 45.1 bits (105), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 92/181 (50%), Gaps = 12/181 (6%)

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR--FLD-LRRDTLHKNIVKRT 146
           + G++ L  + I IL+ A  LPLP   + +  + I +KYR  +LD L  +   + I+ R 
Sbjct: 40  LRGELTLHTKNIYILTKAL-LPLP--DKYKGMKDIEYKYRKRYLDFLTNNEQKEKIITRF 96

Query: 147 RIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQL 204
            I   +R  ++ + ++E  TP+L    P GA  + F    +      Y L  AP+ + + 
Sbjct: 97  NITQEIRRFLLKKKYLEVDTPMLQLL-PGGALAKPFETYLKSLDLVLY-LRIAPELFLKK 154

Query: 205 LMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           L+ SG  ++ F+++ CFR+E   +   P EF  L++  ++     ++   + +++ V ++
Sbjct: 155 LIISGISEKIFELSKCFRNEGLSTIHNP-EFTILEIYKAYANYKYMMKFTKTLIKNVTKK 213

Query: 264 F 264
           F
Sbjct: 214 F 214


>gi|323345803|gb|EGA80172.1| Krs1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 376

 Score = 45.1 bits (105), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 85/183 (46%), Gaps = 7/183 (3%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRII 149
           G++ +   ++++L+     LP   FG ++  +  R++ R+LDL  +   +N  + R+ II
Sbjct: 19  GEVSVFVSRVQLLTPCLHMLPADHFGFKD--QETRYRKRYLDLIMNKDARNRFITRSEII 76

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R  +    FIE  TP++   +    A+ F+          Y +  AP+ + + L+  
Sbjct: 77  RYIRRFLDQRKFIEVETPMMNVIAGGATAKPFITHHNDLDMDMY-MRIAPELFLKQLVVG 135

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           G DR ++I   FR+E       P EF   +   ++ +  D+++  E +   + +E +   
Sbjct: 136 GLDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTELMFSEMVKEITGSY 194

Query: 269 TVS 271
            + 
Sbjct: 195 IIK 197


>gi|153212269|ref|ZP_01948057.1| asparaginyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124116647|gb|EAY35467.1| asparaginyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 481

 Score = 45.1 bits (105), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 67/317 (21%), Positives = 118/317 (37%), Gaps = 65/317 (20%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF   ++V         +
Sbjct: 31  VDSEVTVRGWIRTRRDSKAGISFLAIYD------------GSCFNPIQAVVPNNLNNYDN 78

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 79  EVLKLTTGCSVEVTGKIVESPASGQAFELAASDVKVVGWVEDADTYPMAKTRH---SIEY 135

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 136 LREVAHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 195

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y Q        L  SG            + +   P FR E+  +
Sbjct: 196 TLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNT 255

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT-------- 269
            R   EF+ ++ E++F + + +    E++L+ VF+          EF N           
Sbjct: 256 SRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARL 315

Query: 270 ---VSNNFLRICYDDAI 283
              V ++F ++ Y DAI
Sbjct: 316 EQFVDSDFAQVDYTDAI 332


>gi|302759575|ref|XP_002963210.1| hypothetical protein SELMODRAFT_79851 [Selaginella moellendorffii]
 gi|300168478|gb|EFJ35081.1| hypothetical protein SELMODRAFT_79851 [Selaginella moellendorffii]
          Length = 485

 Score = 45.1 bits (105), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 23/266 (8%)

Query: 5   RTHSCGDL----------GVSDVGS-FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RTH    L          GV+D     V ++G +   R  G + FL IRD     Q+   
Sbjct: 15  RTHKATQLQEKYADLPAGGVADSDEDRVSVAGRIFARRAFGKLAFLGIRDDSASIQLYC- 73

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D A  E    ++S   + I  +V    A         G++ +    + IL+ +  LPLP
Sbjct: 74  -DKAKLESFTQLKS--TVDIGDIV---GATGTLKRTEKGELSVYVDNLVILTKSI-LPLP 126

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-A 171
                      R++ R+LD+  +     + + R ++++ +R  +    F+E  TPIL  A
Sbjct: 127 EKWHGLTDIEKRYRQRYLDMIMNPEVAGVFRARAKVVSVIRRFVEDLGFLEIETPILQGA 186

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F+      +   + L  A + + + ++  GF+R +++   FR+E   +   P
Sbjct: 187 AGGADARPFITHHNSLERDLF-LRIATELHLKRMLVGGFERVYELGRIFRNEGISTRHNP 245

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVL 257
            EF  +++  ++ + +D++   E ++
Sbjct: 246 -EFTSIEIYQAYADYNDMMALAEELV 270



 Score = 43.9 bits (102), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 444 ALEYGMPPTAGMGIGIDRLVMLLTDSPSIRDVIAFPV 480


>gi|226322404|ref|ZP_03797922.1| hypothetical protein COPCOM_00172 [Coprococcus comes ATCC 27758]
 gi|225209204|gb|EEG91558.1| hypothetical protein COPCOM_00172 [Coprococcus comes ATCC 27758]
          Length = 463

 Score = 45.1 bits (105), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 66/306 (21%), Positives = 113/306 (36%), Gaps = 55/306 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V + GWV  +R      F+ + D   +   QVV + +   F EI+K      ++    LV
Sbjct: 21  VTIGGWVRSIRDSKTFGFIVVNDGSFFENLQVVYHDNMENFGEISKLNVGAAIIVKGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A ++    V E    P +  ++   S  +      LR  T
Sbjct: 81  ATPQAKQ--------PFEIQATEV----VVEGTSAPDYPLQKKRHSFEYLRSIAHLRPRT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFL---------VPSRV 186
                V R R + +       +   F+   TP++T S  EGA +           VP   
Sbjct: 129 NTFQAVFRVRSLTAYAIHKFFQERGFVYVHTPLITGSDCEGAGEMFQVTTLDMNNVPKNA 188

Query: 187 NQGSFYALP--------QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +    Y+              Q      A  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 DGTVDYSKDFFGKETNLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNFLRI 277
            E++F + +D +   EN+L+ V              F  F +        N V+++F R+
Sbjct: 249 PEIAFADLEDDMILAENMLKYVIRYVMENAPEEMNFFNSFVDKGLIDRLNNVVNSDFARV 308

Query: 278 CYDDAI 283
            Y +AI
Sbjct: 309 TYTEAI 314



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + ++     +G+ +E     +G      + G   H G   G +R +M 
Sbjct: 386 EIIGGSQREDDYDKLVARMKELGLKEE----DYGFYLDLRKYGSTRHAGFGLGFERCIMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMSNIRDVIPFPRTVNNCEL 463


>gi|207344766|gb|EDZ71796.1| YHR019Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 238

 Score = 45.1 bits (105), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 4/93 (4%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           S VG  V++SGW+HR+R +  +IF+ +RD  G  Q V + D A  +    +  E  + + 
Sbjct: 126 SKVGQRVKVSGWIHRLRSNKKVIFVVLRDGSGFIQCVLSGDLALAQQTLDLTLESTVTLY 185

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVA 107
           G ++    +        G +EL+    E++ +A
Sbjct: 186 GTIV----KLPEGKTAPGGVELNVDYYEVVGLA 214


>gi|153878039|ref|ZP_02004462.1| Lysyl-tRNA synthetase [Beggiatoa sp. PS]
 gi|152065497|gb|EDN65538.1| Lysyl-tRNA synthetase [Beggiatoa sp. PS]
          Length = 185

 Score = 45.1 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 29/40 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A   G+P   G+A G+DR++ML++GA ++REV  FP+ ++
Sbjct: 146 ALTAGLPDCAGVALGLDRLLMLIIGASHIREVLAFPIDKS 185


>gi|153826594|ref|ZP_01979261.1| asparaginyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149739606|gb|EDM53826.1| asparaginyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 481

 Score = 45.1 bits (105), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 67/317 (21%), Positives = 118/317 (37%), Gaps = 65/317 (20%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF   ++V         +
Sbjct: 31  VDSEVTVRGWIRTRRDSKAGISFLAIYD------------GSCFNPIQAVVPNNLNNYDN 78

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 79  EVLKLTTGCSVEVTGKIVESPASGQAFELAASDVKVVGWVEDADTYPMAKTRH---SIEY 135

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 136 LREVAHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 195

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y Q        L  SG            + +   P FR E+  +
Sbjct: 196 TLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNT 255

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT-------- 269
            R   EF+ ++ E++F + + +    E++L+ VF+          EF N           
Sbjct: 256 SRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARL 315

Query: 270 ---VSNNFLRICYDDAI 283
              V ++F ++ Y DAI
Sbjct: 316 EQFVDSDFAQVDYTDAI 332


>gi|149192250|ref|ZP_01870464.1| lysyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148833923|gb|EDL50946.1| lysyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 290

 Score = 45.1 bits (105), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 27/39 (69%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LGAK++ EV  FP
Sbjct: 248 LIDALKSGIPACAGVALGIDRLIMLALGAKHIDEVVAFP 286


>gi|1169858|sp|P43151|GPA_LEIDO RecName: Full=Putative guanine nucleotide-binding protein subunit
           alpha
 gi|556256|gb|AAA50285.1| G protein alpha subunit [Leishmania donovani]
          Length = 464

 Score = 45.1 bits (105), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 24/40 (60%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   A +  +PP GG   GIDR+VM L    N++EV LFP
Sbjct: 283 GFVAALEHALPPTGGWGLGIDRLVMFLTSQSNIKEVLLFP 322


>gi|152979437|ref|YP_001345066.1| lysyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704334|sp|A6VQ84|SYK3_ACTSZ RecName: Full=Uncharacterized protein YjeA
 gi|150841160|gb|ABR75131.1| lysyl-tRNA synthetase-related protein GenX [Actinobacillus
           succinogenes 130Z]
          Length = 323

 Score = 45.1 bits (105), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 132/333 (39%), Gaps = 45/333 (13%)

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKP--DLRNPII---------MHNVTEHFVHSE 310
           E++     V   F R    + IRR+ TD+   ++  PI+         +   +  FV  +
Sbjct: 5   EQWQPTANVETLFARAKIINNIRRFFTDRGVLEVETPILSEFGVTDVHLSTFSTEFVAPQ 64

Query: 311 F-RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-NEWARSQGQPGLAYIFW---RLDE 365
             R  +  L+ +P Y +  + A G G     C    NE A S+  P    + W     D 
Sbjct: 65  AERSKTLWLNTSPEYHMKRLLAAGTGAIFQLCHVFRNEEAGSRHNPEFTMLEWYRPHFDM 124

Query: 366 SGNVAGMGPVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
              +  +  + +  L+    E++  +   Q+     F+  DPL        A   I  EL
Sbjct: 125 YRLINEVDDLLQQILDCEPAESMSYQFAFQE-----FVGVDPLS-------AERPILVEL 172

Query: 425 GI---INCNCFE-FCWIMDFPFYEWNE----EEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
                  C+  E    ++ F F    E    +E+ +   H P T  Q  +  +   D   
Sbjct: 173 ARKYNFMCDLDEDRDTLLQFLFSTVVEPKIGQERPVAVYHFPAT--QAALAQISSEDHRV 230

Query: 477 IKAFQYDLVCNGFEIASG--GIRNHMSEVMLQAFSNVGISKEVVENRF--GGLYRAFQCG 532
            + F++     G E+A+G   + +H  ++      NV  +K  +  R     L  A Q G
Sbjct: 231 AERFEF--YYKGLELANGFHELTDHREQLHRFEQDNVQRAKLALPQREIDRRLLGALQAG 288

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           +P   G+A G+DR+VM+ L  K + EV  F ++
Sbjct: 289 VPNTSGVALGVDRLVMIALDKKRIEEVMAFAIN 321



 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 61/129 (47%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILT------ASSPEGARDFLVPSRVNQGSFYA 193
           + +  R +IIN++R        +E  TPIL+            + +F+ P      + + 
Sbjct: 14  ETLFARAKIINNIRRFFTDRGVLEVETPILSEFGVTDVHLSTFSTEFVAPQAERSKTLW- 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQ+   FR+E+  S   P EF  L+      +   ++N +
Sbjct: 73  LNTSPEYHMKRLLAAGTGAIFQLCHVFRNEEAGSRHNP-EFTMLEWYRPHFDMYRLINEV 131

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 132 DDLLQQILD 140


>gi|300772950|ref|ZP_07082819.1| lysine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300759121|gb|EFK55948.1| lysine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 572

 Score = 45.1 bits (105), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 37/292 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---------VL 71
           V ++G +   R  G   F++++D  G  Q     D  C    K++ +           ++
Sbjct: 55  VSIAGRMMTRRVMGNASFIELQDSTGRIQAYFKRDDICPGEDKTLYNTVFKKLLDIGDII 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G V +   + I  ++   +  + A+ ++ L V +      F     PE  R++ R++
Sbjct: 115 GIKGYVFTTQTDAICIHV--EEFVVLAKSLKPLPVVKSADGKTFDAVTDPE-FRYRQRYV 171

Query: 132 DLR-----RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPS 184
           DL      RDT     VK +++  ++R  +  +  +E  TP+L  S P GA  R F+   
Sbjct: 172 DLVVNPQVRDTF----VKVSKVKTAIRDFLNEQGALEVDTPVL-QSIPGGAAARPFITHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  L+  +++ 
Sbjct: 227 NALDIPLY-LRIANELYLKRLIVGGFDWVYEFSRNFRNEGMDRTHNP-EFTVLEFYVAYK 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNT---VSNN-------FLRICYDDAIRRY 286
           +   ++ T E +L  V    +NG T   V  N       + RI   D+I+ Y
Sbjct: 285 DYVWMMETTEKLLEKV-ALATNGTTSVQVGENQINFAPPYKRISIYDSIKEY 335



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           R+ + GMPP  GI  GIDR+ ML+    ++++V  FP
Sbjct: 460 RSLEYGMPPTAGIGIGIDRLAMLMTNQASIQDVLFFP 496


>gi|147669430|ref|YP_001214248.1| tRNA synthetase, class II (D, K and N) [Dehalococcoides sp. BAV1]
 gi|146270378|gb|ABQ17370.1| tRNA synthetase, class II (D, K and N) [Dehalococcoides sp. BAV1]
          Length = 309

 Score = 45.1 bits (105), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 8/121 (6%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQ 196
           L  N+  R +I+  +R     + F+E  TP+   S +PE    ++ P     G    L  
Sbjct: 12  LEDNLKSRMQILGLIRSFFNEQGFLEVETPVFVPSVAPER---YIKPVECQNG---YLST 65

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+ Y + ++ASG+   +QI+ CFRD +      P EF  L+      +   ++N  EN+
Sbjct: 66  SPELYMKRMLASGYTNIYQISRCFRDGEKGRHHNP-EFSMLEWYRVGADYLQMINDTENL 124

Query: 257 L 257
            
Sbjct: 125 F 125


>gi|301123771|ref|XP_002909612.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262100374|gb|EEY58426.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 217

 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD++  G E+       H  +++++    +G+ +E + N    L+        PHGG   
Sbjct: 132 YDMMIRGEEMVLCAQHVHDPKLLMERMDELGVPQESMRNYIYSLH----LDSLPHGGGGI 187

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML LG  N+ + S+ P
Sbjct: 188 GLERVVMLYLGLGNISKSSMLP 209


>gi|255731784|ref|XP_002550816.1| hypothetical protein CTRG_05114 [Candida tropicalis MYA-3404]
 gi|240131825|gb|EER31384.1| hypothetical protein CTRG_05114 [Candida tropicalis MYA-3404]
          Length = 400

 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 5/121 (4%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           I+ ++++I ++R  ++   F+E STPIL+   +   A  F+   +  Q     L  AP+ 
Sbjct: 193 IIIKSKVIQAIRKFLMDREFLEVSTPILSGKGTGANATPFITTFKSQQ---VHLRVAPEL 249

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           + +  +  GFD+ F+I   FR+E       P EF   +   ++   +++++  E + + V
Sbjct: 250 WLKKFVIGGFDKVFEIGSNFRNEGIDMTHNP-EFSTCEFYQAYTSLEELMDLTEELFKYV 308

Query: 261 F 261
           F
Sbjct: 309 F 309


>gi|310823466|ref|YP_003955824.1| lysyl-tRNA synthetase-like protein genx [Stigmatella aurantiaca
           DW4/3-1]
 gi|309396538|gb|ADO73997.1| lysyl-tRNA synthetase-like protein GenX [Stigmatella aurantiaca
           DW4/3-1]
          Length = 345

 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 19/34 (55%), Positives = 26/34 (76%)

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP  GIA G+DRI+MLL+GA ++ +V LFP  +
Sbjct: 310 MPPAAGIAVGLDRILMLLMGAGSITDVLLFPAHE 343


>gi|238756164|ref|ZP_04617484.1| lysyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238705638|gb|EEP98035.1| lysyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 325

 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 28/42 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A Q GMP   G+A G+DR+VML LGA+ + EV  FP+ +
Sbjct: 283 LIDALQHGMPDCSGVALGVDRLVMLALGAERLSEVIAFPVDR 324


>gi|229525887|ref|ZP_04415292.1| asparaginyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229339468|gb|EEO04485.1| asparaginyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 466

 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 105/275 (38%), Gaps = 44/275 (16%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF   ++V         +
Sbjct: 16  VDSEVTVRGWIRTRRDSKAGISFLAIYD------------GSCFNPIQAVVPNNLNNYDN 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKIVESPASGQAFELAASDVKVVGWVEDADTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 180

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y Q        L  SG            + +   P FR E+  +
Sbjct: 181 TLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            R   EF+ ++ E++F + + +    E++L+ VF+
Sbjct: 241 SRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFK 275


>gi|254226645|ref|ZP_04920224.1| asparaginyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125620814|gb|EAZ49169.1| asparaginyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 418

 Score = 44.7 bits (104), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 67/317 (21%), Positives = 118/317 (37%), Gaps = 65/317 (20%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF   ++V         +
Sbjct: 31  VDSEVTVRGWIRTRRDSKAGISFLAIYD------------GSCFNPIQAVVPNNLNNYDN 78

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 79  EVLKLTTGCSVEVTGKIVESPASGQAFELAASDVKVVGWVEDADTYPMAKTRH---SIEY 135

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +    S
Sbjct: 136 LREVAHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVS 195

Query: 185 RVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          Y Q        L  SG            + +   P FR E+  +
Sbjct: 196 TLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNT 255

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT-------- 269
            R   EF+ ++ E++F + + +    E++L+ VF+          EF N           
Sbjct: 256 SRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARL 315

Query: 270 ---VSNNFLRICYDDAI 283
              V ++F ++ Y DAI
Sbjct: 316 EQFVESDFAQVDYTDAI 332


>gi|169612822|ref|XP_001799828.1| hypothetical protein SNOG_09538 [Phaeosphaeria nodorum SN15]
 gi|160702592|gb|EAT82803.2| hypothetical protein SNOG_09538 [Phaeosphaeria nodorum SN15]
          Length = 609

 Score = 44.7 bits (104), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 89/178 (50%), Gaps = 9/178 (5%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           G++ + A+++ +L+     LP   FG ++  +  R + R+LDL   D+     + R++I+
Sbjct: 199 GELSIFAREVILLTPCLRMLPTEHFGYKD--QEQRHRNRYLDLIMNDSTRNTFITRSKIV 256

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLV-PSRVNQGSFYALPQAPQQYKQLLMA 207
             +R  +   +F+E  TP++   +    A+ F    + ++   F  +  AP+ Y + L+ 
Sbjct: 257 KYVRKYLDERDFLEVQTPMMNKIAGGATAKPFKTYHNELDMELFLRI--APELYLKELVV 314

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
            G +R +++   FR+E       P EF   +  M++ +  D+++  E ++  + +E +
Sbjct: 315 GGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYMAYADYKDVMDMTEEMVSELVKEVT 371



 Score = 40.4 bits (93), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 27/44 (61%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           ++ + G+PP GG   GIDR+VM L    +++EV  FP  ++  +
Sbjct: 538 QSLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEVLTFPFMKDVVE 581


>gi|227876368|ref|ZP_03994480.1| lysine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269975932|ref|ZP_06182936.1| lysyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|307700459|ref|ZP_07637498.1| lysine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|227842909|gb|EEJ53106.1| lysine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269935760|gb|EEZ92290.1| lysyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|307614444|gb|EFN93674.1| lysine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 518

 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 4/154 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           E  R + R+LD+      +++V+ R R++ S+R  +    +IE  TP+L        AR 
Sbjct: 178 EDTRIRQRYLDMITRPAARDMVRNRARVVQSLRRYLDECGYIEVETPMLQVIHGGAAARP 237

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           Y L  AP+ + +  +  G DR F+I   FR+E   S   P EF  ++ 
Sbjct: 238 FETHMNAYDMQLY-LRIAPELFLKRCLIGGIDRVFEINRNFRNEGADSSHSP-EFTMMEA 295

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
             ++ +   I +    +++    E      V+ N
Sbjct: 296 YCAYGDYHQIADLTREMIQRCAREVYGTEVVTLN 329



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 9/109 (8%)

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P+     +KG+     +  ++DL+  GFE+A+G   + +++ ++Q       S +  +  
Sbjct: 409 PEDTSPLVKGHPEKPGQVQKWDLIIRGFEVATG--YSELNDPVIQRARFEAQSLDAAKGD 466

Query: 522 FGGLYR------AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              +        A + GMPP GG+  G+DR++M L G   +RE   FP+
Sbjct: 467 PEAMQLDEDFLVAMEHGMPPAGGMGMGLDRLLMTLTGL-GIRETITFPL 514


>gi|307127751|ref|YP_003879782.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306484813|gb|ADM91682.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 227

 Score = 44.7 bits (104), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 49/225 (21%), Positives = 83/225 (36%), Gaps = 30/225 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA----------CFEIAKSV 65
           VG  V +  WV      G I FL +RD     Q VA  P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKFG-------YELDITDIEVIGESQDYPIT---PKEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELF---- 179

Query: 186 VNQGSFYALPQAPQQYKQLLMASG---FDRYFQIAPCFRDEDPRS 227
             +  ++  P    Q  QL + +G     R F   P FR E  ++
Sbjct: 180 --ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKT 222


>gi|226329418|ref|ZP_03804936.1| hypothetical protein PROPEN_03323 [Proteus penneri ATCC 35198]
 gi|225202604|gb|EEG84958.1| hypothetical protein PROPEN_03323 [Proteus penneri ATCC 35198]
          Length = 325

 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           + NGF E+     + H  E   +    +G+ ++ ++ RF     A + G+P   G+A G+
Sbjct: 245 LANGFRELTDAQEQRHRFERDNRQRVAMGLPEQPIDERFLA---ALEAGLPECSGVALGV 301

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           DR++ML LG +++ +V  FP+
Sbjct: 302 DRLIMLALGVEHLSDVIAFPV 322



 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 10/161 (6%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF-----LVPSRVNQGSFYALP 195
           N++K+ +II+++R        +E  TP+++ ++      +      V    +QG    L 
Sbjct: 15  NLLKKAKIISNIRRFFTDRGVLEVETPMMSQATVTDVHLYPFETQFVGPGASQGLKLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+     +Q+  CFR+E+      P EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAANSGPIYQMGRCFRNEEAGRYHNP-EFTMLEWYRPCFDMYRLMNEVDD 133

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           +L+ V + E S   +    FLR    D +     DK  LR 
Sbjct: 134 LLQEVLDCEASESLSYQQAFLRYLDIDPL---SVDKEKLRE 171


>gi|15231261|ref|NP_187958.1| OVA5 (OVULE ABORTION 5); ATP binding / aminoacyl-tRNA ligase/
           lysine-tRNA ligase/ nucleic acid binding / nucleotide
           binding [Arabidopsis thaliana]
 gi|9280301|dbj|BAB01756.1| lysyl-tRNA synthetase [Arabidopsis thaliana]
 gi|26983796|gb|AAN86150.1| putative lysyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332641843|gb|AEE75364.1| Lysyl-tRNA synthetase, class II [Arabidopsis thaliana]
          Length = 602

 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 52/266 (19%), Positives = 116/266 (43%), Gaps = 8/266 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V   R  G + FL +RD  G  Q+    +    +  + ++ +++   D L  S 
Sbjct: 136 VSIAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLSDDQFEQLK-QFIDIGDILGASG 194

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           S +        G++ +      IL+ +  LPLP           R++ R++D+  +    
Sbjct: 195 SMKRTEK----GELSICVNSFSILTKSL-LPLPDKYHGLTDIDKRYRQRYVDMIANPEVA 249

Query: 141 NIVKR-TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           ++ +R  +I++ +R  + +  ++E  TP+L  ++        V    + G    L  A +
Sbjct: 250 DVFRRRAKIVSEIRKTVESFGYLEVETPVLQGAAGGAEARPFVTFHNSLGRDLYLRIATE 309

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + ++  GF++ ++I   FR+E   +   P EF  ++M  ++ +   +++  E ++  
Sbjct: 310 LHLKRMLVGGFEKVYEIGRIFRNEGISTRHNP-EFTTIEMYEAYSDYHSMMDMAELIVTQ 368

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRR 285
                +   T+      IC +   RR
Sbjct: 369 CSMAVNGKLTIDYQGTEICLERPWRR 394



 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 561 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPV 597


>gi|315052496|ref|XP_003175622.1| asparaginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311340937|gb|EFR00140.1| asparaginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 580

 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 100/231 (43%), Gaps = 13/231 (5%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           +IFL + D YG+ Q V   D      A ++  E  + I G + +   +    +      E
Sbjct: 173 MIFLTLSDGYGLLQCVFTGDLTKTYDAMTLTLETSIAIHGEMRAVPVKQHAPD----NRE 228

Query: 96  LSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
           L A   +++  A    E +   V  + + P+++    R L LR +T    +  R  ++ +
Sbjct: 229 LHADFFQVIGRAAGDKEAITTRVAADAD-PQTL-LDNRHLVLRGETSSSVLKVRAAVVRA 286

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
            R     +  +E + P +  +  EG           + ++  L Q+ Q Y +  +AS  D
Sbjct: 287 FRKTFEQKQMLEVTPPAMVQTQVEGGSTLFEFDYYGEKAY--LTQSSQLYLETCIASLGD 344

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             F + P FR E   + R   E+  ++ E+ F+  +D+L+ +E ++  V +
Sbjct: 345 -VFCVCPSFRAEKSLTRRHLSEYTHIESELDFITFNDLLDHIEEIICSVID 394


>gi|331092530|ref|ZP_08341352.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330400751|gb|EGG80354.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 463

 Score = 44.7 bits (104), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 63/304 (20%), Positives = 112/304 (36%), Gaps = 51/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           + + GWV  +R      F+ + D   +   QVV +     F EI+K      ++    LV
Sbjct: 21  ISVGGWVRSIRDSKTFGFIVVNDGSFFETLQVVYHDTMENFAEISKLNVGAAIIVKGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+ +         E+ A ++ I+  A     P+  +R   E +R     L  R +T
Sbjct: 81  ATPQAKQL--------FEIQATEV-IVEGASAPDYPLQKKRHSFEYLR-TIAHLRPRTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+ I  ++        F+   TPI+T S  EGA +    + ++  +       
Sbjct: 131 FQAVFRVRSLIAYAIHQFFQERGFVYVHTPIITGSDCEGAGEMFRVTTLDMENLPKNEDG 190

Query: 198 PQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              Y Q                    A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 191 TVDYSQDFFNKETSLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAEFWMVEPE 250

Query: 241 MSFVEQDDILNTMENVLRGV--------------FEEFSNG-------NTVSNNFLRICY 279
           ++F + DD +   E +L+ +              F  F +        N  ++ F R+ Y
Sbjct: 251 IAFADLDDNMMLAEAMLKYIINYVLENAPEEMNFFNSFVDKGLLDRLHNVANSEFARVTY 310

Query: 280 DDAI 283
            +AI
Sbjct: 311 TEAI 314



 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E +L   + +G+  E  E +F    R +  G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDYEKLLARMNEMGLKPE--EYQFYLDLRKY--GSTRHAGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMSNIRDVLPFPRTVNNCEL 463


>gi|254582983|ref|XP_002499223.1| ZYRO0E06908p [Zygosaccharomyces rouxii]
 gi|238942797|emb|CAR30968.1| ZYRO0E06908p [Zygosaccharomyces rouxii]
          Length = 594

 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 89/177 (50%), Gaps = 7/177 (3%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRII 149
           G++ +   +I++L+     LP   FG ++  +  R++ R+LDL  +   ++  + R++II
Sbjct: 197 GEVSVFVSRIQLLTPCLHMLPADHFGFKD--QETRYRKRYLDLIMNKGSRDRFITRSKII 254

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           + +R  + ++NFIE  TP++   +    A+ F+          Y +  AP+ + + L+  
Sbjct: 255 SFIRRFLDSKNFIEVETPMMNVIAGGATAKPFVTHHNDLDMDMY-MRIAPELFLKELVVG 313

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           G +R ++I   FR+E       P EF   +   +F +  D+++  E +   + +E +
Sbjct: 314 GMERVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAFADVYDLMDMTELLFSEMVKEIT 369



 Score = 43.9 bits (102), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  +  +REV LFP
Sbjct: 539 ALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLFP 574


>gi|289432697|ref|YP_003462570.1| tRNA synthetase class II (D K and N) [Dehalococcoides sp. GT]
 gi|288946417|gb|ADC74114.1| tRNA synthetase class II (D K and N) [Dehalococcoides sp. GT]
          Length = 309

 Score = 44.7 bits (104), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 8/121 (6%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQ 196
           L  N+  R +I+  +R     + F+E  TP+   S +PE    ++ P     G    L  
Sbjct: 12  LEDNLKSRMQILGLIRSFFNEQGFLEVETPVFVPSVAPER---YIKPVECQNG---YLST 65

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+ Y + ++ASG+   +QI+ CFRD +      P EF  L+      +   ++N  EN+
Sbjct: 66  SPELYMKRMLASGYTNIYQISRCFRDGEKGRHHNP-EFSMLEWYRVGADYLQMINDTENL 124

Query: 257 L 257
            
Sbjct: 125 F 125


>gi|224542002|ref|ZP_03682541.1| hypothetical protein CATMIT_01175 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525059|gb|EEF94164.1| hypothetical protein CATMIT_01175 [Catenibacterium mitsuokai DSM
           15897]
          Length = 46

 Score = 44.7 bits (104), Expect = 0.048,   Method: Composition-based stats.
 Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+P  GG+  GIDR+VMLL G + +REV LFP  +N
Sbjct: 8   ALEYGLPSTGGM--GIDRLVMLLTGQETIREVILFPHMKN 45


>gi|27365578|ref|NP_761106.1| asparaginyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|37680274|ref|NP_934883.1| asparaginyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|320155974|ref|YP_004188353.1| asparaginyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|31340441|sp|Q8DAF0|SYN_VIBVU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|59798575|sp|Q7MJS0|SYN_VIBVY RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|27361726|gb|AAO10633.1| asparaginyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|37199021|dbj|BAC94854.1| asparaginyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|319931286|gb|ADV86150.1| asparaginyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 466

 Score = 44.7 bits (104), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 104/277 (37%), Gaps = 50/277 (18%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV--------RS 67
           V S V + GW+   R    GI FL I D             +CF+  ++V          
Sbjct: 16  VDSEVTVRGWIRTRRDSKAGISFLAIYD------------GSCFDPIQAVVPNNLNNYND 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRF 126
           E +    G  +  + + + +       EL+A  ++++   E+    P+   R    SI +
Sbjct: 64  EVLKLTTGCSVEVTGKIVASPAAGQAFELAATDVKVVGWVEDADTYPMAKTRH---SIEY 120

Query: 127 KYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
                 LR  T     V R R  +  ++      + +   S P++TAS  EGA +     
Sbjct: 121 LREVAHLRPRTNVIGAVARVRHSLSQAIHRFYHEQGYYWLSAPLITASDCEGAGEMF--- 177

Query: 185 RVNQGSFYALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDED 224
           RV+      LP+                       Q      A    + +   P FR E+
Sbjct: 178 RVSTLDLANLPRTESGDVDFNEDFFGKETFLTVSGQLNGEAYACALSKIYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
             + R   EF+ ++ E++F + +DI    E++L+ VF
Sbjct: 238 SNTSRHLAEFWMVEPEVAFADLNDIAKLAEDMLKYVF 274


>gi|167748001|ref|ZP_02420128.1| hypothetical protein ANACAC_02738 [Anaerostipes caccae DSM 14662]
 gi|167652578|gb|EDR96707.1| hypothetical protein ANACAC_02738 [Anaerostipes caccae DSM 14662]
          Length = 461

 Score = 44.7 bits (104), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 120/303 (39%), Gaps = 51/303 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV   R      FL I D   +   Q+V   + + F   K +     + + G++ 
Sbjct: 21  LSLCGWVRSNRDSRDFGFLVINDGTFFEPIQIVYGKELSNFTEVKKLSVGTAVIVKGIL- 79

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELP--LPVFGEREYPESIRFKYRFLDLRRD 136
               ET +A       E+ A+ +E   V  E P   P+  +R   E +R     L  R +
Sbjct: 80  ---TETPDAR---QPFEIQAESVE---VEGESPSDYPLQKKRHSFEYLR-TIAHLRPRAN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPS----RVNQGS- 190
           T       R+ I  ++    +  +F+   TPI++    EGA + F V +     ++QG  
Sbjct: 130 TFQAVYRVRSLIAYAIHKFFMERDFVYVHTPIISGQDCEGAGEMFQVTTLDLEELSQGKK 189

Query: 191 ------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 F+    +     QL     A  F   +   P FR E+  + R   EF+ ++ EM
Sbjct: 190 LDYREDFFERETSLTVSGQLNGEAFAQAFRNIYTFGPTFRAEESNTTRHAAEFWMIEPEM 249

Query: 242 SFVEQDDILNTMENVLR--------------GVFEEFSNG-------NTVSNNFLRICYD 280
           +F + +D +   E++++              G F +F +        +   + F RI Y 
Sbjct: 250 AFADLEDNMLLAEHMIKYIIQYVLEQAPEEMGFFNKFVDKGLLDRLHHVAESEFARITYT 309

Query: 281 DAI 283
           +AI
Sbjct: 310 EAI 312


>gi|308811402|ref|XP_003083009.1| lysyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116054887|emb|CAL56964.1| lysyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 593

 Score = 44.7 bits (104), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 14/143 (9%)

Query: 125 RFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGAR 178
           RF+ RFLDL      RDT +     R+ II  +R  +   +F+E  TP++   +    AR
Sbjct: 231 RFRKRFLDLIMNNEVRDTFYI----RSNIIRYVRKYLDDRDFLEVETPMMNMIAGGATAR 286

Query: 179 DFLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            F+   + +N   F  +  AP+ Y + L+  G +R ++I   FR+E       P EF   
Sbjct: 287 PFVTHHNDLNMTLFMRI--APELYLKQLVVGGIERVYEIGRQFRNEGIDMTHNP-EFTTC 343

Query: 238 DMEMSFVEQDDILNTMENVLRGV 260
           +   ++ + +D++   E ++ G+
Sbjct: 344 EFYQAYADYNDLMTMTEEMISGM 366



 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   G+DR+ MLL    N++EV LFP
Sbjct: 540 SLEIGLPPTGGWGLGVDRLTMLLADKNNIKEVLLFP 575


>gi|164662915|ref|XP_001732579.1| hypothetical protein MGL_0354 [Malassezia globosa CBS 7966]
 gi|159106482|gb|EDP45365.1| hypothetical protein MGL_0354 [Malassezia globosa CBS 7966]
          Length = 534

 Score = 44.7 bits (104), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 30/169 (17%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGA-------RDFLVPSRVNQ--------- 188
           R R+ ++M   M A +F +   PI+T+S  EG         D  VP    +         
Sbjct: 190 RARMEHAMGAWMAANDFCKVHPPIITSSDCEGGGEIFQVVADADVPQNSQETMSLTSSRN 249

Query: 189 GSFYALPQAPQQY----KQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           GS  A       Y     QL +   A G  R + + P FR E   ++R   EF+ L+ E+
Sbjct: 250 GSLAAFWSGQPAYLTVSAQLHLEAYALGLSRVWSLCPVFRAEGSATNRHLAEFWMLEAEL 309

Query: 242 SFVEQDD-----ILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAI 283
            ++   +     +L+  E+VL+   +   +      +  FL   YD A+
Sbjct: 310 CWLPDGEQALRMVLDVTESVLKSALQAAWHDERAKEDMAFLGATYDAAL 358


>gi|153815221|ref|ZP_01967889.1| hypothetical protein RUMTOR_01455 [Ruminococcus torques ATCC 27756]
 gi|317502320|ref|ZP_07960489.1| asparagine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331089924|ref|ZP_08338816.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145847480|gb|EDK24398.1| hypothetical protein RUMTOR_01455 [Ruminococcus torques ATCC 27756]
 gi|316896276|gb|EFV18378.1| asparagine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330403156|gb|EGG82717.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 463

 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 63/310 (20%), Positives = 120/310 (38%), Gaps = 51/310 (16%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVL 71
           S +G  V + GWV  +R      F+ + D  ++   Q+V + +   F E++K      ++
Sbjct: 15  SYLGKKVTIGGWVRSLRDSKTFGFIVVNDGSYFEPLQIVYHDEMENFAEVSKLNVGAAII 74

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
               LV +  A+           E+ A +++I   A     P+  +R   E +R     L
Sbjct: 75  VKGTLVATPQAKQ--------PFEIQADEVQIEG-ASASDYPLQKKRHTFEYLR-TISHL 124

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS- 190
             R +T       R+    ++        F+   TP++T S  EGA +    + ++    
Sbjct: 125 RPRTNTFQAVFRVRSLAAYAIHKFFQERGFVYVHTPLITGSDCEGAGEMFRVTTLDMDQI 184

Query: 191 -------------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+    +     QL     A  F   +   P FR E+  + R   EF
Sbjct: 185 PKNEDGTVDYTKDFFGKETSLTVSGQLNGETYAQAFRSIYTFGPTFRAENSNTTRHAAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNN 273
           + ++ E++F + +D ++  E++L+ V              F  F +        N  +++
Sbjct: 245 WMIEPEIAFADLEDDMDLAESMLKYVINYVLENAPEEMNFFNSFVDKGLLERLNNVANSD 304

Query: 274 FLRICYDDAI 283
           F R+ Y +AI
Sbjct: 305 FARVTYTEAI 314



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E +L   + +G+     E  +G      + G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDYEKLLARMNELGLD----EKDYGFYLDLRKYGSTRHAGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMSNIRDVIPFPRTVNNCEL 463


>gi|258651099|ref|YP_003200255.1| lysyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258554324|gb|ACV77266.1| lysyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 504

 Score = 44.7 bits (104), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 21/95 (22%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL------------YRA 528
           ++DL   G EIA+G        +  Q F          + RF GL             RA
Sbjct: 413 KWDLYIRGTEIATGYSELVDPVIQRQRFQE--------QARFAGLGDDEAMVLDEEFLRA 464

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  MPP GG+  GIDR++M L G   +RE  LFP
Sbjct: 465 MEYAMPPSGGMGMGIDRLMMALTGL-GIRETILFP 498



 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 5/152 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLPV   +   E  R + R++DL  R    + +  R  +  S+R  +    F+E  TP+L
Sbjct: 153 PLPV-AHKPLSEEARVRQRYVDLIVRPQARRTVELRAAVNRSLRATLHDRGFLEVETPML 211

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   AR F           + L  AP+ Y +     G +R F+I   FR+E   S 
Sbjct: 212 QVLHGGAAARPFSTHMNALDMQVF-LRIAPELYLKRAAVGGIERVFEINRNFRNEGVDSS 270

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
             P EF  L+   ++ + + I      +++ V
Sbjct: 271 HSP-EFAMLEAYQAYSDYNGIAELTRTLIQNV 301


>gi|156086936|ref|XP_001610875.1| asparaginyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154798128|gb|EDO07307.1| asparaginyl-tRNA synthetase, putative [Babesia bovis]
          Length = 557

 Score = 44.7 bits (104), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 17/124 (13%)

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
           +FI  +TP+LT  + EG  D     R    +F ++     Q +   + SGF R +++ P 
Sbjct: 245 SFINVTTPLLTTVNCEGMGDIFEIDR----TFLSVSG---QLELEALCSGFSRVWKLGPA 297

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           FR +   + R   EF+ L+ EM   +  D++N +  ++ G      +  T+ +N    C 
Sbjct: 298 FRADRSDTPRHLCEFWMLEAEMVGPDLKDLINVIHQIIIG------SARTILDN----CR 347

Query: 280 DDAI 283
           DD +
Sbjct: 348 DDIL 351



 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D+   G  EIA G IR    EV             V    + G     + G  PHGG   
Sbjct: 471 DIFAEGVGEIAGGSIR----EVNYPELEKSMQEHGVYGKDYAGYLELRKFGNVPHGGFGI 526

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G +R++M LLG +N+++V  FP
Sbjct: 527 GFERMIMFLLGIQNIKDVIHFP 548


>gi|150951370|ref|XP_001387684.2| lysyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149388537|gb|EAZ63661.2| lysyl-tRNA synthetase [Pichia stipitis CBS 6054]
          Length = 593

 Score = 44.7 bits (104), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 85/182 (46%), Gaps = 5/182 (2%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           G++ + A  +++L+     LP   FG ++  +  R++ R+LDL  +   ++  K R++II
Sbjct: 201 GEVSVFATSVQLLTPCLHMLPTEHFGFKD--QEARYRKRYLDLIMNDATRDRFKVRSKII 258

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
             +R  +   +F+E  TPIL   +        +    +      +  AP+ + + L+  G
Sbjct: 259 GYIRKFLDNRDFVEVETPILNVIAGGATAKPFITHHNDLSMDMFMRIAPELFLKELVVGG 318

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
            DR ++I   FR+E       P EF   +   ++ +  D+++  E +   + +E +    
Sbjct: 319 MDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTELMFSEMVKEITGDYK 377

Query: 270 VS 271
           V+
Sbjct: 378 VT 379



 Score = 42.0 bits (97), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  +  +REV LFP
Sbjct: 542 ALEYGLPPTAGWGCGIDRLAMFLTDSNTIREVLLFP 577


>gi|297834174|ref|XP_002884969.1| hypothetical protein ARALYDRAFT_478735 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330809|gb|EFH61228.1| hypothetical protein ARALYDRAFT_478735 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 603

 Score = 44.7 bits (104), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 562 ALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPV 598



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 56/267 (20%), Positives = 118/267 (44%), Gaps = 10/267 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V   R  G + FL +RD  G  Q+         +  + ++ +++   D L  S 
Sbjct: 137 VSIAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKGRLSDDQFEQLK-QFIDIGDILGASG 195

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           S +        G++ +      IL+ +  LPLP           R++ R++D+  +    
Sbjct: 196 SMKRTEK----GELSICVNSFSILTKSL-LPLPDKYHGLTDIDKRYRQRYVDMIANPEVA 250

Query: 141 NIVKR-TRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAP 198
           ++ +R  +I++ +R  + +  ++E  TP+L  A+    AR F V    + G    L  A 
Sbjct: 251 DVFRRRAKIVSEIRKTVESFGYLEVETPVLQGAAGGAEARPF-VTFHNSLGRDLYLRIAT 309

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + ++  GF++ ++I   FR+E   +   P EF  ++M  ++ +   +++  E ++ 
Sbjct: 310 ELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNP-EFTTIEMYEAYSDYQSMMDMAELIVT 368

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRR 285
                 +   T+      IC +   RR
Sbjct: 369 QCSMAVNGKLTIDYQGTEICLERPWRR 395


>gi|321476711|gb|EFX87671.1| hypothetical protein DAPPUDRAFT_306578 [Daphnia pulex]
          Length = 560

 Score = 44.7 bits (104), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 10/229 (4%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-AKSVRSEWVLCIDG 75
           G  V++ GWVHR+R  G  ++F+ +RD  G+ Q V + D  C    A ++ +E  + + G
Sbjct: 137 GQRVKVFGWVHRLRRQGKALMFITLRDGTGLLQCVLS-DQLCQTYDAVTLSTESSVQLFG 195

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +    E  +A    G  EL+    +++  A           +    ++   R + +R 
Sbjct: 196 -TLKLVPEGKSA---PGGHELNVDYWKLIGSAPPGGAEALLNEDAHPDVQLDQRHMMIRG 251

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +   K +  R+ I  + R    +  + E + P    +  EG       +   + ++  L 
Sbjct: 252 ENTSKVLRLRSVITQAFRDHYSSRGYNEVAPPTFVQTQVEGGSTLFELNYFGEKAY--LT 309

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           Q+ Q Y +  + +  D Y  IA  +R E  R+ R   E+  ++ E  F+
Sbjct: 310 QSSQLYLETAIPALGDVYC-IAQSYRAEQSRTRRHLSEYSHVEAECPFI 357


>gi|289522352|ref|ZP_06439206.1| lysine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289504188|gb|EFD25352.1| lysine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 503

 Score = 44.7 bits (104), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  GIDR+ M L  + ++R+V LFP
Sbjct: 462 ALEHGLPPTGGLGIGIDRLTMFLTNSSSIRDVILFP 497


>gi|257465041|ref|ZP_05629412.1| lysyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257450701|gb|EEV24744.1| lysyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 327

 Score = 44.7 bits (104), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 106/268 (39%), Gaps = 45/268 (16%)

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRM-NEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
           L  +P Y +  + A G G     C    NE A  +  P    + W            P  
Sbjct: 77  LMTSPEYHMKRLLAAGSGAIYQLCKVFRNEEAGKRHNPEFTMLEW----------YRPYF 126

Query: 377 KHLNIVNT--EAIRVRLDMQDGDSC-------FFIAGDPLKFCS--FAADARNHIAQELG 425
               ++N   + ++  LD +  +S         ++  DPL          AR H  Q   
Sbjct: 127 DMYRLINEVDDLLQQILDCEPAESYSYQFVFQTYVGLDPLSATKSQLVEKARKHGLQCDD 186

Query: 426 IINCNCFEFCWIMDFPFYEWNE----EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             N +      ++ F F E  E    +E+     H P T  Q  +  +   D    + F+
Sbjct: 187 DENRDT-----LLQFLFSEIVEANIGKERPTAVYHFPST--QAALAQVSSEDHRVSERFE 239

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFS-------NVGISKEVVENRFGGLYRAFQCGMP 534
           +     G E+A+G      ++  ++ F+        +G+  + ++ RF     A + G+P
Sbjct: 240 F--YYKGLELANGFHELDDAQEQIRRFNADNVEREKMGLPPQALDVRFLA---ALEAGIP 294

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              G+A G+DR++ML LGA++++EV  F
Sbjct: 295 NCSGVALGVDRLIMLALGAEHIKEVISF 322



 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 28/129 (21%), Positives = 61/129 (47%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           ++++KR +I+  +R        +E  TP+L+  S         +  FL P        Y 
Sbjct: 18  EHLLKRAKIMKEIRQFFSDRGVLEVETPVLSEFSVTDVHLSTFSTQFLSPFEREAKPLY- 76

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+    + +   ++N +
Sbjct: 77  LMTSPEYHMKRLLAAGSGAIYQLCKVFRNEEAGKRHNP-EFTMLEWYRPYFDMYRLINEV 135

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 136 DDLLQQILD 144


>gi|83319783|ref|YP_424778.1| lysyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
 gi|123767562|sp|Q2SR35|SYK_MYCCT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|83283669|gb|ABC01601.1| lysyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 500

 Score = 44.7 bits (104), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 5/196 (2%)

Query: 92  GQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIIN 150
           G++ +  +++ +LS A   LP    G ++  E  R +Y  L +  D + K    RT+II 
Sbjct: 129 GELSIRCKEVVLLSKALRPLPDKHAGIQDIEEKYRRRYVDLIMNHD-VRKTFQARTKIIR 187

Query: 151 SMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
           +M+  +    ++E  TPIL +      A+ F+    V     Y L  A + + + L+  G
Sbjct: 188 TMQNFLDNRGYMEVETPILHSLKGGASAKPFVTHYNVLNTDVY-LRIATELHLKRLIVGG 246

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
           F+  ++I   FR+E   S R   EF  +++ +++ +   +++  E + R      ++ + 
Sbjct: 247 FEGVYEIGRIFRNE-GMSTRHNPEFTSIELYVAYEDMFFLMDLTEEIFRVCNSAVNSSSV 305

Query: 270 VSNNFLRICYDDAIRR 285
           +  N ++I      +R
Sbjct: 306 IEYNNVKIDLSKPFKR 321



 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A +  MPP  GI  GIDR+VMLL    ++++V LFP
Sbjct: 459 ALEHAMPPTAGIGIGIDRLVMLLTNCDSIKDVLLFP 494


>gi|213421202|ref|ZP_03354268.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 252

 Score = 44.7 bits (104), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 11/193 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 124

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 125 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQGSFYALPQA 197
           N  K R++I+  +R  M+A  F+E  TP++    P G  AR F+          Y L  A
Sbjct: 182 NTFKTRSKILAGIRQFMVARGFMEVETPMMQV-IPGGASARPFITHHNALDLDMY-LRIA 239

Query: 198 PQQYKQLLMASGF 210
           P+ Y + L+  GF
Sbjct: 240 PELYLKRLVVGGF 252


>gi|195867868|ref|ZP_03079867.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|195660445|gb|EDX53703.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
          Length = 454

 Score = 44.7 bits (104), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 61/296 (20%), Positives = 114/296 (38%), Gaps = 40/296 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDS-ACFEIAKSVRSEWVLCID 74
           G  V++  WV   R    I FL + D   +T  Q V   D  + +E   + R    + I+
Sbjct: 18  GQKVQIKAWVRSNRDSKKIGFLVLNDGSSLTNLQAVYRVDKISNYEEIAAARMWAAVAIE 77

Query: 75  GLV--MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           G++     + + +   ++  QI L     + L    +L L         E++R     L 
Sbjct: 78  GVIKLTPTAKQPLELEVLNAQI-LKQSDEDFLLSNNDLSL---------ETLRLNAH-LR 126

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R +  H  +  R  +  ++   M    +   + P+ T +  EGA +     + +   F+
Sbjct: 127 PRTNLFHAIMKVRATLAFAVHEFMNQNEYSWLAAPLFTGNDAEGAGETFSIQKFDNEEFF 186

Query: 193 ALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE---- 245
                     Q +    A  F   +   P FR E   ++R   EF+ ++ EM+F++    
Sbjct: 187 GKQTHLSVTGQLQAEAYAQAFGNVYTFGPTFRAEKSHTNRHLAEFWMIEPEMAFMDLKGM 246

Query: 246 QDDILNTMENVLRGVFEEFSN-----------------GNTVSNNFLRICYDDAIR 284
           QD +   +++V++ V E+                       V + F RI Y DA++
Sbjct: 247 QDIVEILIKHVIKAVLEKNQQELEFLAQRNDENLIKKLQKVVDSKFERIEYKDAVK 302


>gi|67525231|ref|XP_660677.1| hypothetical protein AN3073.2 [Aspergillus nidulans FGSC A4]
 gi|40744468|gb|EAA63644.1| hypothetical protein AN3073.2 [Aspergillus nidulans FGSC A4]
          Length = 530

 Score = 44.7 bits (104), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 95/254 (37%), Gaps = 28/254 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE----WVLCID 74
           +RL G+V  VR      F +I D   +   Q +  P  A  E++     E    W  C  
Sbjct: 49  IRLHGFVRSVRKQKRFAFAEISDGTAVEGIQAILKPAQAA-ELSTGTAIEISGIWKACPP 107

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEEL----PLPVFGEREYPESIRFKYRF 130
           G   S   +  + N IT  I+      E L     L    PL     R   E +   Y+ 
Sbjct: 108 GKEQSHELQATSVN-ITYPIQKKYHSPEFLRHIPHLRFRTPLNALLARFRSECL---YQL 163

Query: 131 LDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARD--FLVPSRVN 187
            ++ R   +   V+    +I S  C    E F       L    P+   D  F  P  +N
Sbjct: 164 GNVFRGAPNGGFVQVHPPVITSSDCEGAGETFAVIPRETLIKGLPKEEHDHFFRAPKYLN 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
             S         Q      A+     + ++P FR E   + R   EFY L+ E++F+   
Sbjct: 224 VSS---------QLHLEAYAAELGNVWTLSPMFRAEKSDTPRHLSEFYMLEAEVNFLSDL 274

Query: 248 DIL-NTMENVLRGV 260
           D L +T+E +LR +
Sbjct: 275 DALTDTVEYLLRDL 288


>gi|251793016|ref|YP_003007742.1| lysyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534409|gb|ACS97655.1| putative lysyl-tRNA synthetase-like protein GenX [Aggregatibacter
           aphrophilus NJ8700]
          Length = 323

 Score = 44.7 bits (104), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 12/113 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE-- 516
           F   Q  +  +   DL   + F++     G E+A+G      +   L+ F    + +E  
Sbjct: 213 FPASQAALAQISSEDLRVAERFEF--YYKGLELANGFHELSDAREQLRRFQQDNLQREKM 270

Query: 517 -----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 ++ R   L  A Q G+P   G+A G+DR++M+ +G +++REV  F +
Sbjct: 271 GLPVRAIDTR---LLAALQAGIPNCSGVALGVDRLLMIAMGTESIREVISFAI 320



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 28/129 (21%), Positives = 61/129 (47%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILT------ASSPEGARDFLVPSRVNQGSFYA 193
           KN++ R +++  +R        +E  TP+L+            + +F+ P      + + 
Sbjct: 14  KNLLTRAKLLAEIRRFFTDRGLLEVETPVLSEFGVTDVHLATFSTEFISPFGEQSKTLW- 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI   FR+E+  +   P EF  L+      +   ++N +
Sbjct: 73  LSTSPEYHMKRLLAAGSGPIFQIGKVFRNEEAGNRHNP-EFTMLEWYRPHFDMYRLINEV 131

Query: 254 ENVLRGVFE 262
           +++L+ + E
Sbjct: 132 DDLLQQILE 140


>gi|319935563|ref|ZP_08009997.1| asparaginyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319809440|gb|EFW05861.1| asparaginyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 461

 Score = 44.7 bits (104), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 48/250 (19%), Positives = 107/250 (42%), Gaps = 19/250 (7%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDS-ACFEIAKSVRSEWVLCIDG 75
            +V L GWV   R +G + FL + D  ++   Q+V   ++   ++  K + +   + + G
Sbjct: 26  EYVELDGWVRTNRDNGKVGFLALNDGTYFRNCQIVYLKETLEDYDTIKHISTGSAIRVLG 85

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
                + E+          E+ A +I +    ++   P+  +R   E +R +   L  R 
Sbjct: 86  -KFKLTPESKQP------FEIEATQIVVEGACDD-DFPLQKKRHSFEYMR-EIPHLRPRA 136

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF---- 191
           +T +     R+ +  ++     ++ F+   TP++T +  EGA +    + ++   F    
Sbjct: 137 NTFYAIFRLRSVLSMAIHEFFQSQGFVYVHTPLITGNDGEGAGEMFRATTIDNTDFDKDF 196

Query: 192 ---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
               A      Q         F   +   P FR E+  + R   EF+ ++ E++F + +D
Sbjct: 197 FGKEAFLTVTGQLHVEAFCMAFRDVYTFGPAFRAENSNTSRHASEFWMIEPEIAFADLED 256

Query: 249 ILNTMENVLR 258
            ++ +E++++
Sbjct: 257 DMDLIEDMVK 266



 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 15/89 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  G  R    +V+ +     G++K+ ++      R+GG           H
Sbjct: 376 DLLVPGIGELVGGSQREERYDVLERIMEEKGMAKDGLQWYMDLRRYGGC---------KH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G   G DR +M L G +N+R+V  FP +
Sbjct: 427 AGFGLGFDRFLMYLTGMQNIRDVEPFPRT 455


>gi|308233555|ref|ZP_07664292.1| asparaginyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943357|ref|ZP_08240822.1| asparagine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491326|gb|EGF23100.1| asparagine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 466

 Score = 44.3 bits (103), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 124/322 (38%), Gaps = 73/322 (22%)

Query: 16  DVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           D+ SF    V ++GW+  VR      F+ I D             +CF   + V     L
Sbjct: 12  DMDSFDKTEVVVAGWLRSVRDMKNFGFVTIND------------GSCFRDLQVVMQRETL 59

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYP-ESIRFKYR 129
                + +++     A I+TG +EL+  + +   + A+ + +    + +YP +  R    
Sbjct: 60  QNYAEIAAQNMGA--ALIVTGTLELTPSRPQPFELQAKTIMVEGTSDPDYPMQKKRASRE 117

Query: 130 FLDLRRDTLHKNIVKRTRIINSM-RCRMIA----------ENFIECSTPILTASSPEGAR 178
           FL        +++  RT +  ++ R R  A            F+   TPI+T+S  EGA 
Sbjct: 118 FL-----RTQQHLRARTNLFRAVFRVRSTAAFAIHKFFQERGFVYVHTPIITSSDAEGAG 172

Query: 179 DFL---------VPSRVN----QGSFYALPQAPQQYKQLL---MASGFDRYFQIAPCFRD 222
           +           VP +         F+  P +     QL     A  F   +   P FR 
Sbjct: 173 EMFKVTTFDLAHVPMKDGAVDYSQDFFGAPTSLTVSGQLEAENFAMSFGDVYTFGPTFRA 232

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSNG- 267
           E+  + R   EF+ ++ EM+F +    ++  E +L+ V              F +F +  
Sbjct: 233 ENSNTRRHAAEFWMVEPEMAFCDLKGYMDCAEAMLKYVISYVMDACPYEMELFNKFVDKG 292

Query: 268 ------NTVSNNFLRICYDDAI 283
                 +   ++F R+ Y DAI
Sbjct: 293 LQARLEHVAHSDFARVSYTDAI 314


>gi|197302035|ref|ZP_03167096.1| hypothetical protein RUMLAC_00763 [Ruminococcus lactaris ATCC
           29176]
 gi|197298844|gb|EDY33383.1| hypothetical protein RUMLAC_00763 [Ruminococcus lactaris ATCC
           29176]
          Length = 463

 Score = 44.3 bits (103), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 114/307 (37%), Gaps = 57/307 (18%)

Query: 21  VRLSGWVHRVRPHG--GIIFLDIRDHYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V + GW+  +R     G I L+   ++   QVV +     F EI+K      V+    LV
Sbjct: 21  VTVGGWIRSIRDSKTFGFIVLNDGSYFETLQVVYHDKMENFAEISKLNVGAAVVVKGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A ++ ++  A     P+  +R   E +R     L  R +T
Sbjct: 81  ATPQAKQ--------PFEIQADEV-VVEGASAPDYPLQKKRHSFEYLR-TISHLRPRTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+    ++        F+   TP++T S  EGA +     RV       LP+ 
Sbjct: 131 FQAVFRVRSLAAYAIHKFFQERGFVYVHTPLITGSDCEGAGEMF---RVTTMDMENLPKN 187

Query: 198 PQ---QYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                 Y Q                    A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGTVDYTQDFFGKETSLTVSGQLNGETYAQAFRSIYTFGPTFRAENSNTTRHAAEFWMI 247

Query: 238 DMEMSFVEQDDILNTMENVLRGV--------------FEEFSNG-------NTVSNNFLR 276
           + E++F + +D +   E +L+ V              F  F +        N V+++F R
Sbjct: 248 EPEIAFADLEDDMELAEAMLKYVINYVLENAPEEMNFFNSFVDKGLLDRLHNVVNSDFAR 307

Query: 277 ICYDDAI 283
           + Y +AI
Sbjct: 308 VTYTEAI 314



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E +L     +G+ +E     +G      + G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDYEKLLARMQELGLKEE----DYGFYLDLRKYGSTRHAGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMSNIRDVIPFPRTVNNCEL 463


>gi|124513716|ref|XP_001350214.1| lysine-tRNA ligase [Plasmodium falciparum 3D7]
 gi|23615631|emb|CAD52623.1| lysine-tRNA ligase [Plasmodium falciparum 3D7]
          Length = 583

 Score = 44.3 bits (103), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 4/134 (2%)

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFL 181
           IR++ R+LDL   ++     V RT+IIN +R  +    F E  TP++   +    AR F+
Sbjct: 232 IRYRQRYLDLLINESSRHTFVTRTKIINFLRNFLNERGFFEVETPMMNLIAGGANARPFI 291

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  A +   ++L+  G D+ ++I   FR+E   +   P EF   +   
Sbjct: 292 THHNDLDLDLY-LRIATELPLKMLIVGGIDKVYEIGKVFRNEGIDNTHNP-EFTSCEFYW 349

Query: 242 SFVEQDDILNTMEN 255
           ++ + +D++   E+
Sbjct: 350 AYADYNDLIKWSED 363



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG+  GIDRI M L    ++++V LFP
Sbjct: 542 SLEYGLPPTGGLGLGIDRITMFLTNKNSIKDVILFP 577


>gi|301118242|ref|XP_002906849.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262108198|gb|EEY66250.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 284

 Score = 44.3 bits (103), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 3/87 (3%)

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM-ASGFDRYFQI 216
           + +++E  TP L   +     ++      +Q +   L Q+PQ YK +    +  +R F+I
Sbjct: 87  SSDYVEIHTPKLVGGASGSGANYFTLKYFDQDA--TLAQSPQTYKHMACDVASLERVFEI 144

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSF 243
            P FR E   ++R   E   LD+E++ 
Sbjct: 145 GPGFRAETSNTNRHMRELVGLDLELTI 171


>gi|28209914|ref|NP_780858.1| asparaginyl-tRNA synthetase [Clostridium tetani E88]
 gi|38258347|sp|Q899M9|SYN_CLOTE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|28202349|gb|AAO34795.1| asparaginyl-tRNA synthetase [Clostridium tetani E88]
          Length = 463

 Score = 44.3 bits (103), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 62/310 (20%), Positives = 119/310 (38%), Gaps = 63/310 (20%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDG-LV 77
           + ++GW+   R      F+++ D   +   Q++ + +   F+    +     + ++G LV
Sbjct: 21  IVVAGWIRTERTSKNFGFIELNDGSFFKNLQIIIDTNLDNFDKVSKLPISSSIVVEGKLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
            + SA+           E+ A K+ +   + ++ PL     ++   S  F      LR  
Sbjct: 81  ATPSAKQ--------PFEVQASKVTVEGTSLQDYPL-----QKKRHSFEFLRSIAHLRPR 127

Query: 137 TLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           +   + V R R + +         +NF+   TPI+TAS  EGA +     RV       +
Sbjct: 128 SNTFSAVFRIRSLAAYAVHKFFQEKNFVYVHTPIITASDCEGAGEMF---RVTTLDLNNI 184

Query: 195 PQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           P+  +                    Q      A  F   +   P FR E+  + R   EF
Sbjct: 185 PKNDEGKIDFSQDFFDKDAKLTVSGQLSAESYALAFGNVYTFGPTFRAENSNTARHASEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNN 273
           + ++ EM+F +  D ++  E +++ +              F  F +        N V++ 
Sbjct: 245 WMIEPEMAFADLTDYMDVAEEMVKYIINYVLENAPEEMNFFNSFIDKDLFKRLDNVVNSE 304

Query: 274 FLRICYDDAI 283
           F RI Y +A+
Sbjct: 305 FKRITYTEAV 314


>gi|224543536|ref|ZP_03684075.1| hypothetical protein CATMIT_02745 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523538|gb|EEF92643.1| hypothetical protein CATMIT_02745 [Catenibacterium mitsuokai DSM
           15897]
          Length = 461

 Score = 44.3 bits (103), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 106/261 (40%), Gaps = 33/261 (12%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLC 72
           +D   +V L GWV   R  G + F+ + D  ++   QVV                E +  
Sbjct: 22  TDNVEYVELEGWVRTNRDSGKLGFIALNDGSYFRNCQVV-------------YLEEKLKN 68

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYP-ESIRFKYRF 130
            D +    +   I+   + G+++L+    +   V A E+ L    + +YP +  R  + F
Sbjct: 69  FDEVSHIATGSAIH---VLGKLKLTPDAKQPFEVEATEIILEGDCDSDYPLQKKRHSFEF 125

Query: 131 L----DLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPS 184
           +     LR        + R R + SM      ++  F+   TPI+T++  EGA +    +
Sbjct: 126 MREIPHLRPRANSFYAIFRLRSVLSMAIHEFFQDQGFVYVHTPIITSNDGEGAGEMFRVT 185

Query: 185 RVNQGSFY-------ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            ++   F        A      Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 186 TIDDTDFSKDFFEKEAYLTVTGQLHVEAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMV 245

Query: 238 DMEMSFVEQDDILNTMENVLR 258
           + E++F + +D +  +E +++
Sbjct: 246 EPEIAFADLEDDMCLIEEMVK 266



 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 15/89 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  G  R    +V+ +     G++KE ++      RFGG           H
Sbjct: 376 DLLVPGIGELVGGSQREERYDVLEKLMDEKGMNKETLQWYMDLRRFGGC---------KH 426

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G   G DR +M L G  N+R+V  FP +
Sbjct: 427 AGFGLGFDRFLMYLTGMANIRDVEPFPRT 455


>gi|268572787|ref|XP_002641412.1| Hypothetical protein CBG13278 [Caenorhabditis briggsae]
          Length = 397

 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 78/195 (40%), Gaps = 39/195 (20%)

Query: 129 RFLDLRRDTLHKNIVKRTRIINS---MRCR----------MIAENFIECSTPILTASSPE 175
           R+ DL  D L K    R R +     +R R           ++ +FI   TP LT +  E
Sbjct: 66  RYDDLSADNLRKKTHLRARNVQFAAFLRLRSTIFRETHEFFMSRDFIHIDTPKLTRNDCE 125

Query: 176 GAR---DFLVPSRVNQGSFYALPQAP------QQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           G     D +  S         + + P       Q     + S   R + + P FR E  +
Sbjct: 126 GGGEVFDVVTTSSEALNGSEGVKEDPIYLSVSSQLHLEALVSRLQRVYTLGPAFRAEKQQ 185

Query: 227 SDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVF----------------EEFSNGNT 269
           S     EF+ L+ E++FVE  D++   +E+ ++ +F                 E ++   
Sbjct: 186 SHAHLSEFHMLEAEVAFVETIDEMCELVESYVQHMFSLLDSPKFQTELKIVGSEPTSPVP 245

Query: 270 VSNNFLRICYDDAIR 284
            ++ F RI YDDA++
Sbjct: 246 TNSKFSRITYDDAVK 260


>gi|306817260|ref|ZP_07451006.1| lysine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|304649940|gb|EFM47219.1| lysine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
          Length = 518

 Score = 44.3 bits (103), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 4/154 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           E  R + R+LD+      +++V+ R R++ S+R  +    +IE  TP+L        AR 
Sbjct: 178 EDTRIRQRYLDMITRPAARDMVRNRARVVQSLRRYLDECGYIEVETPMLQVIHGGAAARP 237

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           Y L  AP+ + +  +  G DR F+I   FR+E   S   P EF  ++ 
Sbjct: 238 FETHMNAYDMQLY-LRIAPELFLKRCLIGGIDRVFEINRNFRNEGADSSHSP-EFTMMEA 295

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
             ++ +   I +    +++    E      V+ N
Sbjct: 296 YCAYGDYHQIADLTREMIQRSAREVYGTEVVTLN 329



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 9/109 (8%)

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P+     +KG+     +  ++DL+  GFE+A+G   + +++ ++Q       S +  +  
Sbjct: 409 PEDTSPLVKGHPEKPGQVQKWDLIIRGFEVATG--YSELNDPVIQRARFEAQSLDAAKGD 466

Query: 522 FGGLYR------AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              +        A + GMPP GG+  G+DR++M L G   +RE   FP+
Sbjct: 467 PEAMQLDEDFLVAMEHGMPPAGGMGMGLDRLLMTLTGL-GIRETITFPL 514


>gi|1333771|emb|CAA83727.1| Lys-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 58

 Score = 44.3 bits (103), Expect = 0.059,   Method: Composition-based stats.
 Identities = 19/39 (48%), Positives = 25/39 (64%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A +  MPP  GI  GIDR+VMLL    ++++V LFP
Sbjct: 14  LVEALEHAMPPTAGIGIGIDRLVMLLTNCDSIKDVLLFP 52


>gi|154495948|ref|ZP_02034644.1| hypothetical protein BACCAP_00229 [Bacteroides capillosus ATCC
           29799]
 gi|150274831|gb|EDN01887.1| hypothetical protein BACCAP_00229 [Bacteroides capillosus ATCC
           29799]
          Length = 475

 Score = 44.3 bits (103), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 72/357 (20%), Positives = 134/357 (37%), Gaps = 72/357 (20%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V + GW   +R      F+++ D             +CF   + V    VL   G  
Sbjct: 29  GQTVTVCGWARTIRDMKTFGFIELND------------GSCFRNLQIVMDANVL---GNY 73

Query: 78  MSRSAETINAN-IITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDLRR 135
              + + + A  I+TG + L+ +  + L V A+ + +      +YP  ++ K   ++  R
Sbjct: 74  KEIAGQNVGAALIVTGTVVLTPEAKQPLEVKADTIVVEGPSTPDYP--LQKKRHSVEYLR 131

Query: 136 DTLHKNIVKRTRIINS-MRCRMIAEN----------FIECSTPILTASSPEGARDFLVPS 184
              H  +  RT + ++  R R +A +          F+   TPI+TAS  EGA +    +
Sbjct: 132 TIAH--LRPRTNLFSAAFRVRSVAAHAIHTFFQDRGFVYVHTPIITASDCEGAGEMFRVT 189

Query: 185 RVNQGSFYALPQAPQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRS 227
            ++  +          Y Q                    A  F   +   P FR E   +
Sbjct: 190 TLDMENLPKKDDGTVDYSQDFFGKSANLTVSGQLNAENFAMAFGNVYTFGPTFRAEKSNT 249

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSNG------ 267
            R   EF+ ++ EM+F +    ++  E +++ +              F  F +       
Sbjct: 250 TRHAAEFWMIEPEMAFCDLAGDMDVAEAMIKHIINTVMEKCPDEMNFFNSFVDKGLKERL 309

Query: 268 -NTVSNNFLRICYDDAIR--RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
            +  S++F R+ Y +A+   +   DK D +        TEH  +   ++F K + V 
Sbjct: 310 EHVASSDFGRVTYTEAVELLKQNNDKFDYKVEWGCDLQTEHERYLTEQIFKKPVFVT 366


>gi|313904374|ref|ZP_07837751.1| asparaginyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313470710|gb|EFR66035.1| asparaginyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 464

 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 63/310 (20%), Positives = 124/310 (40%), Gaps = 61/310 (19%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDG-LV 77
           +++ GWV   R      FL + D   +   Q+V   +   F    S+     + ++G LV
Sbjct: 22  IKVGGWVRNNRASKNFGFLVLHDGTFFDTLQIVYGAELDNFSGLSSLNIGTAVIVEGTLV 81

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A+ +    V E    P +  ++   ++ F      LR  T
Sbjct: 82  PTPEAKQ--------PFEIQAESV----VVEGESTPDYPLQKKRHTVEFLRTIQHLRPRT 129

Query: 138 LHKNIVKRTRIINSMRCRMIAE-----NFIECSTPILTASSPEGARDFLVPSRVN----- 187
              N+ + T  + S+    I +     +F+   TP++T+S  EGA +    + ++     
Sbjct: 130 ---NLFQATYRVRSLCAYAIHKFFQENDFVYVHTPLITSSDAEGAGEMFQVTTLDLNNIP 186

Query: 188 ---QGS------FYALPQAPQQYKQLL---MASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
               GS      F+  P       QL     A  F + +   P FR E+  + R   EF+
Sbjct: 187 KNEDGSVDFSQDFFKKPTNLTVSGQLYGETYAQAFRKIYTFGPTFRAENSNTTRHAAEFW 246

Query: 236 QLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNF 274
            ++ E++F +  D ++  E +L+ +              F +F +        + ++++F
Sbjct: 247 MIEPEIAFADLQDDMDCAEAMLKYIIRYVLENAPEEMNFFNQFVDKGLLDRLNHVMNSDF 306

Query: 275 LRICYDDAIR 284
            R+ Y +AI+
Sbjct: 307 GRVTYTEAIK 316



 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + + Q    +G+  ++ +  F    R F  G   H G   G +R VM 
Sbjct: 387 EIIGGSQREEDYDKLKQRMEELGM--DMSQYDFYLDLRKF--GTTRHAGFGLGFERCVMY 442

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N CDL
Sbjct: 443 LTGVSNIRDVLPFPRTVNHCDL 464


>gi|302655131|ref|XP_003019360.1| hypothetical protein TRV_06641 [Trichophyton verrucosum HKI 0517]
 gi|291183076|gb|EFE38715.1| hypothetical protein TRV_06641 [Trichophyton verrucosum HKI 0517]
          Length = 539

 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 100/231 (43%), Gaps = 13/231 (5%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           +IFL + D YG+ Q V   D      A ++  E  + I G + +   +    +      E
Sbjct: 173 MIFLTLTDGYGLLQCVFTGDLTKTYDAMTLTLETSMAIHGEMRAVPVKQHAPD----NRE 228

Query: 96  LSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
           L A   +++  A    E +   V  + + P+++    R L LR +T    +  R  ++ +
Sbjct: 229 LHADFFQVIGRAAGDKEAITTRVAADAD-PQTL-LDNRHLVLRGETSSSVLKVRAAVVRA 286

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
            R     +  +E + P +  +  EG           + ++  L Q+ Q Y +  +AS  D
Sbjct: 287 FRKTFEQKQMLEVTPPAMVQTQVEGGSTLFEFDYYGEKAY--LTQSSQLYLETCLASLGD 344

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             F I P FR E   + R   E+  ++ E+ F+  +D+L+ +E ++  V +
Sbjct: 345 -VFCICPSFRAEKSLTRRHLSEYTHIESELDFITFNDLLDHIEEIICSVID 394


>gi|308809193|ref|XP_003081906.1| putative lysyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116060373|emb|CAL55709.1| putative lysyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 349

 Score = 44.3 bits (103), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 307 ALEYGMPPTAGMGLGIDRLVMLLTNSPSIRDVIAFPL 343


>gi|311086878|gb|ADP66959.1| lysyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 245

 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   G+PP  G+A G+DR++ML+L  K++ EV  FP+ +
Sbjct: 206 ALSYGLPPCSGVAIGLDRLIMLILNKKSIHEVIAFPVDR 244


>gi|284052903|ref|ZP_06383113.1| lysyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 228

 Score = 44.3 bits (103), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 28/44 (63%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +A   GMP  GG+  G+DR+VM L   +++R+  LFP  ++F D
Sbjct: 184 QALSLGMPNCGGMGIGVDRLVMFLTDTQSIRDAILFPTMRSFKD 227


>gi|314922522|gb|EFS86353.1| lysyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
 gi|314965597|gb|EFT09696.1| lysyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
 gi|314982761|gb|EFT26853.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315091413|gb|EFT63389.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315094348|gb|EFT66324.1| lysyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315105074|gb|EFT77050.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|327329142|gb|EGE70902.1| lysine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 494

 Score = 44.3 bits (103), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 7/153 (4%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP    +E  E  R + R+ DL  R+   + +  R  I  ++R  +    F+E  TPIL
Sbjct: 145 PLPTL-HKELSEETRVRRRYADLVVREESRQMVRTRALITRAVRRALDERGFLEIETPIL 203

Query: 170 T-ASSPEGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
                   AR F   + +N      +L  A + Y +  M  G DR +++   FR+E   S
Sbjct: 204 QLVHGGAAARPF--NTHLNAFDIDMSLRIALELYLKRAMVGGTDRVYEMGRVFRNEGIDS 261

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
                EF  L+  MS+  Q  I   +++++  V
Sbjct: 262 SH-SAEFSMLEAYMSWGNQFTIAEVIKDIIMAV 293



 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 15/92 (16%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG---------LYRAFQCG 532
           +DL+  G E  +G      SE++        ++K+ +    G             A + G
Sbjct: 404 WDLIIGGMERGTG-----FSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFLEALEFG 458

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            PP GG+  G+DR+VML   A  +RE  LFP+
Sbjct: 459 CPPMGGLGLGVDRLVMLFTNA-GIRETILFPL 489


>gi|312083484|ref|XP_003143881.1| 63kd antigen [Loa loa]
 gi|307760954|gb|EFO20188.1| 63kd antigen [Loa loa]
          Length = 528

 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 63/281 (22%), Positives = 107/281 (38%), Gaps = 25/281 (8%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV-- 77
           V + GWVHR+R  G  ++F  +RD  G  QVV          A SV +E  + I G+V  
Sbjct: 106 VCVKGWVHRIRRQGKSLMFFVLRDGTGFLQVVLMDKLCQTYEALSVNTESTVEIYGVVKE 165

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    E  N +      EL A   +++  A    +      E         R L +R + 
Sbjct: 166 VPECKEAPNGH------ELIADFWKVIGNAPSGGIDNVLNEEAGVDKMLDNRHLVIRGEN 219

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R     +MR       ++E + P L  +  EG           + S+  L Q+
Sbjct: 220 AAALLRLRAATTRAMREHFYNAGYVEVAPPTLVQTQVEGGSTLFKFDYFGEPSY--LTQS 277

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  +      +  ++     E  R+ R   E+  ++ E  F+  DD++  +E ++
Sbjct: 278 SQLYLETCIPPLAMSFALLSLTGVAEKSRTRRHLAEYAHVEAECPFITLDDLMMKIEELV 337

Query: 258 -------------RGVFEEFSNG-NTVSNNFLRICYDDAIR 284
                        R + E  +         FLR+ Y DAI+
Sbjct: 338 CDTVDRLLADEEARKLLEHVNPKFEPPKRPFLRMQYKDAIK 378


>gi|84497266|ref|ZP_00996088.1| lysyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84382154|gb|EAP98036.1| lysyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 509

 Score = 44.3 bits (103), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 81/351 (23%), Positives = 146/351 (41%), Gaps = 45/351 (12%)

Query: 5   RTHSCGDL----GVSDVGS----FVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPD 55
           RTHS  ++    G  + G      V ++G V  +R  G + F  +++  GI  Q++ +  
Sbjct: 51  RTHSLAEVRSQWGHLETGQETDDVVSVAGRVVFIRNTGKLAFATLQEGEGIRLQIMLS-- 108

Query: 56  SACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
               E+ +   + W   +D G  +S +   I++    G++ + A    + S A   P+PV
Sbjct: 109 --LAEVGEDALAAWKSDVDLGDHVSVTGRVISSR--RGELSVMATSWTMASKALR-PMPV 163

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-AS 172
              +E  E  R + R+ DL      +++V+ + +I ++MR  +  + ++E  TPIL    
Sbjct: 164 L-HKELSEESRVRQRYADLIVRQEARDMVRTKAKIYSAMRHELERQGYLEVETPILQLIH 222

Query: 173 SPEGARDFLVPSRVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
               AR F    + +  +F     L  A +   +  +  G DR +++   FR+E   +  
Sbjct: 223 GGAAARPF----KTHLNAFDQEMTLRIALELNLKKAVVGGVDRVYEMGRIFRNEGVDATH 278

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE-------EFSNGNTVSNNFLRI--CYD 280
            P EF  L+   ++ +Q  I   +++V     +       E   G    +   R    YD
Sbjct: 279 SP-EFTMLEAYQAWGDQTTIAQLLKDVYLAAADAIGSRQIETDKGTIDLDGEWRWLPVYD 337

Query: 281 DAIRRYG------TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS--VNPG 323
                 G      TD   LR     H VT      + +VF ++L   V PG
Sbjct: 338 AVSEAVGETVNVDTDLETLRAHAAKHEVTIDPAWDKDKVFLELLGELVEPG 388



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G PP GGI  G+DR+VML     N+RE  LFP
Sbjct: 468 RALEYGAPPMGGIGFGVDRLVMLFTDV-NIRETILFP 503


>gi|309810941|ref|ZP_07704741.1| lysine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308435095|gb|EFP58927.1| lysine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 1055

 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 18/258 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-G 75
            G  V ++G V  +R  GG+ F+ + +     Q +A  D    E  +     W   ID G
Sbjct: 611 TGERVSVTGRVRALRDFGGVSFVVLDEDGARLQAMATRDVTPAEKYE----HWRHWIDLG 666

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL- 133
            ++S + E + +       ELS    +    A+ L P+P           R + R LDL 
Sbjct: 667 DIVSVTGEIVTSK----HAELSVHVSDWQMAAKCLSPIPDLHSPFCDPDARIRNRSLDLI 722

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ-GS 190
             RD++   +++R+R + + R    A  + E  TP+L A      AR F   + +N  G 
Sbjct: 723 VNRDSM-DTLLRRSRGVRAFRDAFDALGYTEVETPMLQAVHGGASARPF--KTHINAYGM 779

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              +  AP+ Y + L   G  + F++   FR+E   +   P EF  L+   ++ +   + 
Sbjct: 780 ELFMRIAPELYLKRLAVGGMQKVFELNRNFRNEGADATHNP-EFTSLEAYDAYGDYLTMR 838

Query: 251 NTMENVLRGVFEEFSNGN 268
           +    VL  V    + G 
Sbjct: 839 DLTREVLLAVARAVNGGE 856


>gi|161833768|ref|YP_001597964.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri GWSS]
 gi|152206258|gb|ABS30568.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri GWSS]
          Length = 460

 Score = 44.3 bits (103), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 104/275 (37%), Gaps = 33/275 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM-S 79
           + + GWV   R +  II  D      I Q+  +  +  +     +     L + G+V+ S
Sbjct: 23  ISIKGWVKHFRSNCFIIISDGSTIKNI-QIYVDKHNCFYSFLNKINIGVSLEVIGVVVFS 81

Query: 80  RSAETINANIITGQIELSAQKIEILSV--AEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +  + I        IE+ A KI I      E+L   +   +E+      +  +L  R   
Sbjct: 82  KGKKQI--------IEIYANKINIYGSFNPEDLQNTILQPKEHSFKKLREQAYLRFRTTI 133

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-------- 189
               +  R  I  S+      + F   +TPI+T    EGA D    +             
Sbjct: 134 FSSIMRIRHNISFSIHKFFYKKKFYYINTPIITTYDTEGAGDMFRVTNFKNNNNNNNNNL 193

Query: 190 SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+          QL     ASG  + +   P FR E   + R   EF+ ++ E+SF E 
Sbjct: 194 DFFGASTYLTVSGQLQGEAAASGLGKIYTFGPTFRAEKSNTFRHLSEFWMIEPEISFYEL 253

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
           ++I++  E  L+ + +            ++ CY+D
Sbjct: 254 NNIMSLAEEFLKFIIKY----------VIKHCYED 278


>gi|307202947|gb|EFN82167.1| Asparaginyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 516

 Score = 44.3 bits (103), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 61/279 (21%), Positives = 104/279 (37%), Gaps = 25/279 (8%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V+L GW+HR+R  G  ++F+ +RD  G  Q V   D  C           +L  +  V  
Sbjct: 96  VKLYGWIHRLRRQGKALMFITLRDGTGFLQCVLT-DKLC-----QTYDALILATEAAVQL 149

Query: 80  RSAETI--NANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                I        G  EL     +++  +           E    ++   R + +R + 
Sbjct: 150 FGTLKIVPEGKSAPGGHELCVDYWKLIGSSPPGGADSILNEEALPDVQLDNRHIMIRGEN 209

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
             + ++ R+ +  + R       + E + P L  +  EG           + +F  L Q+
Sbjct: 210 TSRILIMRSILTQAFRDHYKDRGYYEVTPPTLVQTQVEGGSTLFKLDYFGENAF--LTQS 267

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV----EQDDILNTM 253
            Q Y +  + +  D Y  IA  +R E  R+ R   EF  ++ E  F+      D + + +
Sbjct: 268 SQLYLETCIPAMGDVYC-IAQSYRAEQSRTRRHLAEFTHIEAECPFITFDDLLDRLEDLI 326

Query: 254 ENVLRGVF---------EEFSNGNTVSNNFLRICYDDAI 283
            NV+  V          E   N       F R+ Y DAI
Sbjct: 327 CNVVERVLQSPLGSLVKELNPNFQVPKKPFKRMNYSDAI 365


>gi|221057065|ref|XP_002259670.1| asparagine--tRNA ligase [Plasmodium knowlesi strain H]
 gi|193809742|emb|CAQ40444.1| asparagine--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 978

 Score = 44.3 bits (103), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 8/84 (9%)

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS----- 242
           +G    L Q+PQ YKQ+L+ S F+R F++   +R+E   + R   EF  LD+E       
Sbjct: 508 EGEEVILAQSPQFYKQMLINSDFERIFEMNYSYRNEKFNTSRHLNEFLSLDIEKVIYHNY 567

Query: 243 ---FVEQDDILNTMENVLRGVFEE 263
               +   ++LN +   ++  FEE
Sbjct: 568 YEIIIPMYNMLNRINKYIQETFEE 591


>gi|67471183|ref|XP_651543.1| asparaginyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56468293|gb|EAL46156.1| asparaginyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 451

 Score = 44.3 bits (103), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 8/116 (6%)

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGIS 514
           H P  M    M  + G+  L+      DL+  G  EI  G +R    + ++ A+   G++
Sbjct: 342 HFPSKMKAFYMSKVPGHPDLTESV---DLLMPGVGEIVGGSMRIWNYDELMGAYKANGLN 398

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                + +    +  + G  PHGG   G++R+VM LLG  ++R+V L+P     C+
Sbjct: 399 P----DPYYWYTQQRKYGSCPHGGYGLGVERLVMWLLGEDHIRKVCLYPRYLERCE 450


>gi|256272104|gb|EEU07106.1| Krs1p [Saccharomyces cerevisiae JAY291]
          Length = 527

 Score = 44.3 bits (103), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 84/177 (47%), Gaps = 7/177 (3%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRII 149
           G++ +   ++++L+     LP   FG ++  +  R++ R+LDL  +   +N  + R+ II
Sbjct: 133 GEVSVFVSRVQLLTPCLHMLPADHFGFKD--QETRYRKRYLDLIMNKDARNRFITRSEII 190

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R  +    FIE  TP++   +    A+ F+          Y +  AP+ + + L+  
Sbjct: 191 RYIRRFLDQRKFIEVETPMMNVIAGGATAKPFITHHNDLDMDMY-MRIAPELFLKQLVVG 249

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           G DR ++I   FR+E       P EF   +   ++ +  D+++  E +   + +E +
Sbjct: 250 GLDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTELMFSEMVKEIT 305



 Score = 43.9 bits (102), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  +  +REV LFP
Sbjct: 475 ALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLFP 510


>gi|145299800|ref|YP_001142641.1| asparaginyl-tRNA synthetase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142852572|gb|ABO90893.1| asparaginyl-tRNA synthetase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 481

 Score = 44.3 bits (103), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 70/321 (21%), Positives = 121/321 (37%), Gaps = 65/321 (20%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRD-------HYGITQVVANPDSACFEIAKS 64
           G   VG+   + GW+   R    GI FL + D          +   +AN ++    +  +
Sbjct: 27  GKYAVGTTQTVKGWIRTRRDSKAGISFLAVSDGSCFHPVQAVVPNTLANYENEVLRLTTA 86

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPE 122
              E    + G+V +           +GQ  EL A  ++++   E+    P+  +R   E
Sbjct: 87  CSVE----VSGVVAASQG--------SGQAFELQATDVKVVGWVEDPDTYPMAAKRHSIE 134

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            +R +     LR  T     V R R  +  ++      E ++  + P++TAS  EGA + 
Sbjct: 135 YLREQAH---LRPRTNIVGAVTRVRNCLAQAIHRFFHEEGYLWIAAPLITASDTEGAGEM 191

Query: 181 LVPSRVNQGSFYALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDE 223
              S ++  +          Y +        L  SG            + +   P FR E
Sbjct: 192 FRVSTLDLENLPRTDAGKVDYDKDFFGKETFLTVSGQLNVETYACALSKVYTFGPTFRAE 251

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNT---- 269
           +  + R   EF+ ++ E++F   DD     E +L+ VF           EF   +     
Sbjct: 252 NSNTSRHLAEFWMVEPEIAFANLDDNAALAEAMLKYVFNAVLAERRDDLEFFAQHVDKDA 311

Query: 270 -------VSNNFLRICYDDAI 283
                  VS++F +I Y DAI
Sbjct: 312 IGRLERFVSSDFAQIDYTDAI 332



 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    EV+ Q  + +G++KE         YR  +  G  PH G  
Sbjct: 396 DVLAPGIGEIIGGAQREERLEVLDQRMAEMGLNKEDY-----WWYRDLRRFGTVPHAGFG 450

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R+V+ + G  NVR+V  FP +
Sbjct: 451 LGFERLVVYVTGMGNVRDVIPFPRT 475


>gi|145520227|ref|XP_001445971.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413444|emb|CAK78574.1| unnamed protein product [Paramecium tetraurelia]
          Length = 366

 Score = 44.3 bits (103), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 25/40 (62%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G  ++ +  +PP  G   GIDR VMLL   +N++EV LFP
Sbjct: 289 GFIKSLEHALPPTAGWGLGIDRFVMLLTDTQNIQEVLLFP 328


>gi|255934216|ref|XP_002558389.1| Pc12g15910 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583008|emb|CAP81218.1| Pc12g15910 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 534

 Score = 44.3 bits (103), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 103/278 (37%), Gaps = 60/278 (21%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSAC---FEIAKSVRSEWVLCIDG 75
           V+++G++  VR      F +I D   +   Q +  P  A       A  +   W  C  G
Sbjct: 49  VKVNGFIRSVRKQKRFAFAEISDGSTVEPLQAILKPAQAADLSTGTAIEISGIWKACPPG 108

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
              +   +T +  ++              S AE  P            I+ KY   D  R
Sbjct: 109 KEQTHELQTSDVKVVGA------------SDAETFP------------IQKKYHSPDFLR 144

Query: 136 DTLHKNIVKRTRIINSMRCRMIAE---------------NFIECSTPILTASSPEGA--- 177
              H  I  RT   NS+  R  +E                F +   P++T+S  EGA   
Sbjct: 145 QIPHLRI--RT-PFNSLLSRFRSECMFQLGNVFHSHPDGAFTQVQPPLITSSDCEGAGET 201

Query: 178 -----RDFLVPSRVNQGSFYALPQAPQQYKQLLM---ASGFDRYFQIAPCFRDEDPRSDR 229
                R    P+  N+  F+  P+      QL +   A+     + + P FR E   + R
Sbjct: 202 FTLTPRGAATPTTENE-HFFRAPKYLTVSSQLHLEAYAAELGNVWTLTPVFRAEKSDTPR 260

Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
              EFY L+ E++F+   D + + +E++LR +     N
Sbjct: 261 HLSEFYMLEAEVNFMSDLDSLTDLVEHLLRDLTRRLYN 298


>gi|325110859|ref|YP_004271927.1| hypothetical protein Plabr_4332 [Planctomyces brasiliensis DSM
           5305]
 gi|324971127|gb|ADY61905.1| Uncharacterized protein YjeA [Planctomyces brasiliensis DSM 5305]
          Length = 343

 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 9/118 (7%)

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDL----VCNGF-EIASGGIRNHMSEVMLQAF 508
           F H+ + + Q  +     +D    + F+  L    +CNG+ E+         +    +  
Sbjct: 229 FLHD-YPVSQAALAQANPSDARVAERFELYLQGVEICNGYHELTDAAELRRRNRRQNELR 287

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +  G+ +    +R   L  A + GMP   G A G+DR++ML LG K +++V  FP+ +
Sbjct: 288 AEAGLPRLPENSR---LLEAMEAGMPASSGTAVGLDRLLMLALGCKRLQDVLAFPVDR 342


>gi|115372716|ref|ZP_01460022.1| truncated lysyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115370197|gb|EAU69126.1| truncated lysyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 846

 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 19/34 (55%), Positives = 26/34 (76%)

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP  GIA G+DRI+MLL+GA ++ +V LFP  +
Sbjct: 811 MPPAAGIAVGLDRILMLLMGAGSITDVLLFPAHE 844


>gi|291463763|pdb|3M4P|A Chain A, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
           In Complex With Asparaginyl-Adenylate
 gi|291463764|pdb|3M4P|B Chain B, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
           In Complex With Asparaginyl-Adenylate
 gi|291463765|pdb|3M4P|C Chain C, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
           In Complex With Asparaginyl-Adenylate
 gi|291463766|pdb|3M4P|D Chain D, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
           In Complex With Asparaginyl-Adenylate
 gi|291463767|pdb|3M4Q|A Chain A, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
 gi|291463768|pdb|3M4Q|B Chain B, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
          Length = 456

 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 8/116 (6%)

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGIS 514
           H P  M    M  + G+  L+      DL+  G  EI  G +R    + ++ A+   G++
Sbjct: 347 HFPSKMKAFYMSKVPGHPDLTESV---DLLMPGVGEIVGGSMRIWNYDELMGAYKANGLN 403

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                + +    +  + G  PHGG   G++R+VM LLG  ++R+V L+P     C+
Sbjct: 404 P----DPYYWYTQQRKYGSCPHGGYGLGVERLVMWLLGEDHIRKVCLYPRYLERCE 455


>gi|242399490|ref|YP_002994915.1| Asparaginyl-tRNA synthetase-related protein [Thermococcus sibiricus
           MM 739]
 gi|242265884|gb|ACS90566.1| Asparaginyl-tRNA synthetase-related protein [Thermococcus sibiricus
           MM 739]
          Length = 305

 Score = 43.9 bits (102), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 40/192 (20%), Positives = 85/192 (44%), Gaps = 20/192 (10%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-----SPEGARDFLVPSRVNQ-GSF 191
           + K I  +T++I+ +    + + F +   P++ +S      P+ A   +    ++  G+ 
Sbjct: 15  IEKTIRVQTKLIDYLTDFFVKKGF-KWLLPVMLSSITDPLWPDPASSKMRAPEIDAYGTR 73

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDMEMSFVEQDDI 249
             L  +   +KQ  +A G ++ F ++P  R E+   D  R   EF Q+D E+++   DD+
Sbjct: 74  LKLMHSMILHKQFAIAMGLEKIFVLSPNIRLEERDRDDGRHAYEFTQIDFEIAYATMDDV 133

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN--------FLRICYDDAIRRYGTDKPDLR---NPII 298
           ++ +E ++ G+F+E      +           F R    +    +G D+   R    P  
Sbjct: 134 MSLIEELIVGLFKEARTWEELGERDLPKVKVPFKRFTMAEIEEEFGDDEEASRAMEEPFW 193

Query: 299 MHNVTEHFVHSE 310
           + +++  F   E
Sbjct: 194 ITDISREFYDRE 205



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)

Query: 482 YDLVC-NGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG-MPPHGG 538
           YDL+   G+ E++SGG R    E +L+     G+S       F       + G + P  G
Sbjct: 216 YDLILPEGYGEVSSGGEREWEYEAILRKLKESGLSLRA----FRPYLEVAKAGKLKPSAG 271

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
              GI+R+V  ++GAK++ EV  FP
Sbjct: 272 AGIGIERLVRYIVGAKHIAEVQPFP 296


>gi|310790050|gb|EFQ25583.1| lysyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 531

 Score = 43.9 bits (102), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 123/271 (45%), Gaps = 31/271 (11%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIA 62
           ++     D G ++V   V L G V  +R HG  ++F+ I + +   Q + N         
Sbjct: 38  WKNAKLDDPGNTEV---VTLYGRVQSIRLHGNRLVFVTIVNEFEKIQGMVN--------Y 86

Query: 63  KSVRSEWVLCIDGL-VMSRSAETINANIITGQI------ELSAQKI---EILSVA-EELP 111
           +++ +   + +D   + +R  E  +   ITG+       EL+ Q +   E+LS A E++P
Sbjct: 87  RNLDNLPDMTLDSFKLFARLIEKGDHISITGKPTRTSTGELTIQAVVLPELLSPAMEQIP 146

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT 170
             +      PE+ + + R +D+  +    +I++ R+ I   MR     ++F+E  TPIL 
Sbjct: 147 QTLTD----PET-KSRKRHVDMIVNPEVADILRLRSHITKYMRDYFHEQSFLEFQTPILA 201

Query: 171 ASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
            ++    AR F   +        +L  AP+ + + L+  G  + F+I P FR+E      
Sbjct: 202 ENAGGAVARSFTTQATEFPSKELSLRIAPELWLKRLVVGGVHKVFEIGPAFRNEGIDGTH 261

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            P EF   +   ++    +++   E +L G+
Sbjct: 262 NP-EFTMCEFYSAYTNLPELIARTEELLAGL 291



 Score = 38.5 bits (88), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 25/45 (55%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           RA + G+PP GG   G++R+VML  GA  + +   F   +N   L
Sbjct: 477 RALEAGLPPTGGWGCGVERLVMLFSGANRISDCLSFGTLKNVVGL 521


>gi|297793179|ref|XP_002864474.1| EMB2755 [Arabidopsis lyrata subsp. lyrata]
 gi|297310309|gb|EFH40733.1| EMB2755 [Arabidopsis lyrata subsp. lyrata]
          Length = 572

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 27/179 (15%)

Query: 11  DLGVSDVGSFVRLSGWVH--RVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           D G    G  +R+ GWV   R +  G   FL++ D      +    DS+ ++++K V + 
Sbjct: 43  DGGAKLAGQKIRIGGWVKTGREQGKGAFAFLEVNDGSCPANLQVMVDSSLYDLSKLVATG 102

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-ESIRFK 127
             + +DG++            +  + + + Q+IE LSV + + + +    +YP    +  
Sbjct: 103 TCVTVDGVLK-----------VPPEGKGTKQRIE-LSVVKVIDVGIVDATKYPLPKTKLT 150

Query: 128 YRFLDLRRDTLH-----KNIVKRTRIINSMRCRMIA----ENFIECSTPILTASSPEGA 177
             FL   RD LH      +I    RI N++     +     +F+   TPI+T S  EGA
Sbjct: 151 LEFL---RDVLHLRSRTNSISAVARIRNALAFATHSFFQEHSFLYIHTPIITTSDCEGA 206


>gi|297526478|ref|YP_003668502.1| tRNA synthetase class II (D K and N) [Staphylothermus hellenicus
           DSM 12710]
 gi|297255394|gb|ADI31603.1| tRNA synthetase class II (D K and N) [Staphylothermus hellenicus
           DSM 12710]
          Length = 478

 Score = 43.9 bits (102), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 10/136 (7%)

Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
           R  + ++ FIE   P+++ +S  G R          G  Y L  +   +KQ   A+ +++
Sbjct: 184 RGILYSKGFIELLPPMISVASDPGLRGAGKLKTKYYGETYELTSSVIMFKQA-SAAVYEK 242

Query: 213 YFQIAPCFRDEDPR---SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
            F  A   R+E P    + R   EF QLD+E +    +D++   E +L  V        T
Sbjct: 243 VFFTARNIREEPPENIWTGRHLSEFTQLDIEWAMSGLEDVMRLAEELLYNV------SKT 296

Query: 270 VSNNFLRICYDDAIRR 285
           +++ ++ + YD   R+
Sbjct: 297 IADKYMDLIYDIGERK 312


>gi|297171257|gb|ADI22264.1| lysyl-tRNA synthetase (class II) [uncultured Gemmatimonadales
           bacterium HF0200_36I24]
          Length = 514

 Score = 43.9 bits (102), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           RA + GMPP GG+  GIDR+ M+L    ++R+V LF
Sbjct: 473 RALEYGMPPTGGLGMGIDRLTMILTDQVSIRDVILF 508


>gi|45655826|ref|YP_003635.1| lysyl-tRNA synthetase-like protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45602797|gb|AAS72272.1| lysyl-tRNA synthetase homolog [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 338

 Score = 43.9 bits (102), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 80/170 (47%), Gaps = 10/170 (5%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARD-FLV--PSRVNQGSFYALPQA 197
           +++R + ++ +R      N++E  TP L    S E   D FLV  PS+  +G    L  +
Sbjct: 23  LIQRAKFLSVLRKFFEKRNYLEMDTPCLKPVPSMEPYLDPFLVRSPSKKEKG---YLITS 79

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+   + +++ G ++ ++I   FR  +  S     EF  L+     +  + +++   ++L
Sbjct: 80  PEYSLKEILSKGLEKIYEITHTFRSGEEGSPFHSAEFLMLEFYTVGITLEGLMDFCTDLL 139

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRY---GTDKPDLRNPIIMHNVTE 304
             + +EF +         R+  +++++RY   G  K +L   I  H ++E
Sbjct: 140 EVLDQEFYSYGFNREQVQRMSVEESLKRYAFCGISKSELDRVITEHTLSE 189



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
            GL RA + G+P   GI+ G+DR+++ +LG  ++REVS  P    F +  +GS
Sbjct: 286 SGLERALKEGIPDSCGISIGLDRLLLCILGGSSLREVS--PYYGKFLNFQIGS 336


>gi|257066687|ref|YP_003152943.1| asparaginyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798567|gb|ACV29222.1| asparaginyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 462

 Score = 43.9 bits (102), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 102/259 (39%), Gaps = 40/259 (15%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGIT----QVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           GW+   R    + F+++ D  G T    QVV   D   ++            +D   +S 
Sbjct: 22  GWMRNQRFGKNVGFIELND--GTTFKNLQVVVGSDIENYD-----------ELDKQYLST 68

Query: 81  SAETINANIITGQ----IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           S E     + TG      E+ A+++ +L  + E   P+  +R+  E +R     L  R +
Sbjct: 69  SLEVKGVLVKTGNSKNPYEIQAKEVNVLGESSE-KFPIQKQRQTLEFMR-TIPHLRARTN 126

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T       R+ +  S+        F+  + PI+T+S  EGA +    + ++         
Sbjct: 127 TYRAVFRVRSILAYSLHKFFQERGFLYVNPPIVTSSDAEGAGEMFNITTIDPEDAPRNKD 186

Query: 197 APQQY-------KQLLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               Y       K  L  SG          F   +   P FR E+  + R   EF+ L+ 
Sbjct: 187 GSVDYSKDFFSKKSYLTVSGQLEAEDYALAFGDVYTFGPTFRAEESNTPRHAAEFWMLEP 246

Query: 240 EMSFVEQDDILNTMENVLR 258
           EM+F + +  ++  E++++
Sbjct: 247 EMAFTDYNLAMDVAEDMIK 265



 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 7/95 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           + +D  ++ AF  D++  G  E+  G  R    + + ++    G++ E  EN      R 
Sbjct: 364 RNDDGKTVAAF--DMLVPGVGELIGGSQREERYDELYKSMEENGLNPEEYENYLD--LRR 419

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           F  G   H G   G +R VM + G KN+R+V  +P
Sbjct: 420 F--GTVVHSGFGLGFERAVMYVTGMKNIRDVLAYP 452


>gi|255086717|ref|XP_002509325.1| predicted protein [Micromonas sp. RCC299]
 gi|226524603|gb|ACO70583.1| predicted protein [Micromonas sp. RCC299]
          Length = 566

 Score = 43.9 bits (102), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  G+DR+VMLL  + ++R+V  FP+
Sbjct: 525 ALEYGMPPTAGMGLGVDRLVMLLTNSASIRDVIAFPL 561



 Score = 41.6 bits (96), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 125/310 (40%), Gaps = 35/310 (11%)

Query: 5   RTHSCGDL---------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           RTH+   L         G    G+   + G V   R  G + FL + D  G  Q+  +  
Sbjct: 83  RTHTATQLQSIHKDLADGAEVEGTVEAVCGRVKARRVFGKLAFLSLEDDGGSIQLYCDKK 142

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSR--SAETINANIITGQIELSAQKIEILSVAEELPLP 113
                I       +   +D + M     A         G++ ++    E+L+ +  LPLP
Sbjct: 143 ----RIDAVTPGAFKRIVDLVDMGDIVGARGTVKRTEKGELSIAVDSFEMLTKSL-LPLP 197

Query: 114 VFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
              +      +R++ R++DL      RDT       R  I++ +R  +    F+E  TP+
Sbjct: 198 DKFKGLTDVEMRYRQRYVDLIANPEVRDTFRA----RAGIVSGIRRFLDDRAFMEMETPV 253

Query: 169 L-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L T +    A+ F        G    L  A + + + L+  GF+R +++   FR+E   +
Sbjct: 254 LETRAGGADAKPFNTFHNA-LGMNLTLRIATELHLKRLVVGGFERVYEMGRIFRNEGIST 312

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
              P EF  +++  ++ +  D+L   E ++    E  + G       L+I Y D +   G
Sbjct: 313 RHNP-EFTSVEVYQAYADVSDMLELTEEMICYCCERANGGA------LKIQYGDELIDLG 365

Query: 288 TDKPDLRNPI 297
             +P  R P+
Sbjct: 366 -QRPWRRAPM 374


>gi|258614293|ref|ZP_05712063.1| lysyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 209

 Score = 43.9 bits (102), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 28/181 (15%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L           ++++G    ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSEELHELFDPRTKEELAEMGLTASVAGRMMTRRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSA---CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EEL 110
           D      +E+ K         + G +M            TG++ + A +I ILS A   L
Sbjct: 100 DQVGDEAYEVFKHADLGDFFGVTGQIMKTD---------TGEVSIKASEITILSKALRPL 150

Query: 111 PLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
           P    G     +  R++ R+LDL   R++  +  +KR++II+ +R  +    +IE  TP+
Sbjct: 151 PDKYHGLTNIEQ--RYRQRYLDLISNRESFDR-FMKRSQIISEIRRYLDGNGYIEVETPV 207

Query: 169 L 169
           L
Sbjct: 208 L 208


>gi|297171359|gb|ADI22363.1| lysyl-tRNA synthetase (class II) [uncultured nuHF2 cluster
           bacterium HF0500_02A10]
          Length = 236

 Score = 43.9 bits (102), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           RA + GMPP GG+  GIDR+ M+L    ++R+V LF
Sbjct: 195 RALEYGMPPTGGLGMGIDRLTMILTDQVSIRDVILF 230


>gi|302495859|ref|XP_003009943.1| hypothetical protein ARB_03869 [Arthroderma benhamiae CBS 112371]
 gi|291173465|gb|EFE29298.1| hypothetical protein ARB_03869 [Arthroderma benhamiae CBS 112371]
          Length = 539

 Score = 43.9 bits (102), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 100/231 (43%), Gaps = 13/231 (5%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           +IFL + D YG+ Q V   D      A ++  E  + I G + +   +    +      E
Sbjct: 173 MIFLTLTDGYGLLQCVFTGDLTKTYDAMTLTLETSMAIHGEMRAVPVKQHAPD----NRE 228

Query: 96  LSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
           L A   +++  A    E +   V  + + P+++    R L LR +T    +  R  ++ +
Sbjct: 229 LHADFFQVIGRAAGDKEAITTRVAADAD-PQTL-LDNRHLVLRGETSSSVLKVRAAVVRA 286

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
            R     +  +E + P +  +  EG           + ++  L Q+ Q Y +  +AS  D
Sbjct: 287 FRKMFEQKQMLEVTPPAMVQTQVEGGSTLFEFDYYGEKAY--LTQSSQLYLETCLASLGD 344

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             F I P FR E   + R   E+  ++ E+ F+  +D+L+ +E ++  V +
Sbjct: 345 -VFCICPSFRAEKSLTRRHLSEYTHIESELDFITFNDLLDHIEEIICSVID 394


>gi|303310747|ref|XP_003065385.1| asparaginyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240105047|gb|EER23240.1| asparaginyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320034745|gb|EFW16688.1| asparaginyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 529

 Score = 43.9 bits (102), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 20/188 (10%)

Query: 95  ELSAQKIEILSVAEELPLPV---FGEREYPESI---RFKYRFLDLRRDTLHKNIVKRTRI 148
           EL A  ++++  A+    P+   +  +++  +I   RF+  F  L      + I + T +
Sbjct: 113 ELKATDVKLVGEADPQTYPIQKKYHSQDFLRTIPHLRFRTPFNSLLSRFRSECIYQATNV 172

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVNQGS-----FYALPQAPQQYK 202
            +S        NFI+   P++T+S  EGA + F V  R          ++  P+      
Sbjct: 173 FHSR----PGLNFIQVQPPLITSSDCEGAGEVFRVSPREAAAEGEDEEYFRAPKYLTVSS 228

Query: 203 QLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLR 258
           QL +   A+     + ++P FR E   + R   EFY L+ E++FV + D++   +E+ +R
Sbjct: 229 QLHLEAYAADLGNVWTLSPTFRAEKSDTPRHLSEFYMLEAELNFVNDLDELTKFVESFIR 288

Query: 259 GVFEEFSN 266
            + E+  N
Sbjct: 289 ELTEKLYN 296


>gi|118111615|ref|XP_001234617.1| PREDICTED: hypothetical protein, partial [Gallus gallus]
          Length = 96

 Score = 43.9 bits (102), Expect = 0.082,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
           +D+EMSFV+Q  I   +E +L+  + E      +   F  + YD+A+  YGTDKPD R
Sbjct: 1   IDIEMSFVDQAGIQRLIEGLLQYSWPE--ERGPIMTPFPTMTYDEALADYGTDKPDTR 56


>gi|302821725|ref|XP_002992524.1| hypothetical protein SELMODRAFT_448794 [Selaginella moellendorffii]
 gi|300139726|gb|EFJ06462.1| hypothetical protein SELMODRAFT_448794 [Selaginella moellendorffii]
          Length = 487

 Score = 43.9 bits (102), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)

Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           ++  F+      E  EN    L+   + G+PP  G A GIDR+VMLL  + +++EV L+P
Sbjct: 422 LVSGFTQCRDPAEAQEN--SELHTLLEYGLPPCSGWACGIDRLVMLLTDSVDIKEVVLYP 479

Query: 564 MSQNFCDL 571
             +   DL
Sbjct: 480 ALKPAEDL 487


>gi|332290050|ref|YP_004420902.1| lysyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330432946|gb|AEC18005.1| lysyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 325

 Score = 43.9 bits (102), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 9/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR------DFLVPSRVNQGSFYA 193
           +N++KR +II  +R   +    +E  TPIL+  S           +F  P   +Q     
Sbjct: 17  QNLLKRAKIIADIRQFFVDRGLLEVETPILSEFSVTDVHLSTFQTEFTPP--FDQKKTLH 74

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A G    FQI   FR+E+      P EF  L+    F +   ++N +
Sbjct: 75  LITSPEYHMKRLLAEGSGPIFQICKVFRNEEAGKRHNP-EFTMLEWYRPFFDMYRLINEV 133

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 134 DDLLQQILD 142



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 104/259 (40%), Gaps = 27/259 (10%)

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRM-NEWARSQGQPGLAYIFWR---LDESGNVAGMG 373
           L  +P Y +  + A+G G     C    NE A  +  P    + W     D    +  + 
Sbjct: 75  LITSPEYHMKRLLAEGSGPIFQICKVFRNEEAGKRHNPEFTMLEWYRPFFDMYRLINEVD 134

Query: 374 PVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
            + +  L+    E++  +   Q+     ++  DPL   S A       AQ  G++N +  
Sbjct: 135 DLLQQILDCPPAESLSYQFVFQE-----YVGVDPLS-ASKAELVEKAKAQ--GLVNADME 186

Query: 433 EFCWIMDFPFYEWNE----EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL---- 484
               ++ + F E  E    +E+ I   H  F   Q  +  +   D    + F++      
Sbjct: 187 GRDTLLQYLFSEVVEKNIGQERPIAVYH--FPSAQAALAQISSEDHRVAERFEFYYKGLE 244

Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           + NGF E+     + H  E        + +  + +++RF     A + GMP   G+A G+
Sbjct: 245 LANGFHELTDANEQMHRFEQDNLLREKLHLPPQQMDSRFLA---ALKSGMPSCSGVALGV 301

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR++M+ L   N+ +V  F
Sbjct: 302 DRLLMIALSTDNIEDVISF 320


>gi|145640943|ref|ZP_01796525.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145274457|gb|EDK14321.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 323

 Score = 43.9 bits (102), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 10/122 (8%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL----VCNGF-EIASGGIRNHMSE 502
           +E+ I   H P T  Q  +  +   D    + F++      + NGF E+A    + H  E
Sbjct: 204 KERPIAVYHFPST--QAALAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFE 261

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  F
Sbjct: 262 LDNQQRQKCELPTREIDERFLA---ALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 318

Query: 563 PM 564
            M
Sbjct: 319 AM 320



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           KN++KR +II  +R        +E  TP+L+            + +FL P      + + 
Sbjct: 14  KNLLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFGEQSKTLW- 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI+  FR+E+   +R   EF  L+          ++N +
Sbjct: 73  LSTSPEYHMKRLLAAGSGPIFQISKVFRNEEA-GNRHNPEFTMLEWYRPHFHMHRLINEV 131

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 132 DDLLQQILD 140


>gi|323309512|gb|EGA62723.1| Krs1p [Saccharomyces cerevisiae FostersO]
          Length = 591

 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  +  +REV LFP
Sbjct: 539 ALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLFP 574



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 84/177 (47%), Gaps = 7/177 (3%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRII 149
           G++ +   ++++L+     LP   FG ++  +  R++ R+LDL  +   +N  + R+ II
Sbjct: 197 GEVSVFVSRVQLLTPCLHMLPADHFGFKD--QETRYRKRYLDLIMNKDARNRFITRSEII 254

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R  +    FIE  TP++   +    A+ F+          Y +  AP+ + + L+  
Sbjct: 255 RYIRRFLDQRKFIEVETPMMNVIAGGATAKPFITHHNDLDMDMY-MRIAPELFLKQLVVG 313

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           G DR ++I   FR+E       P EF   +   ++ +  D+++  E +   + +E +
Sbjct: 314 GLDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTELMFSEMVKEIT 369


>gi|323305592|gb|EGA59333.1| Krs1p [Saccharomyces cerevisiae FostersB]
          Length = 437

 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 84/177 (47%), Gaps = 7/177 (3%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRII 149
           G++ +   ++++L+     LP   FG ++  +  R++ R+LDL  +   +N  + R+ II
Sbjct: 43  GEVSVFVSRVQLLTPCLHMLPADHFGFKD--QETRYRKRYLDLIMNKDARNRFITRSEII 100

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R  +    FIE  TP++   +    A+ F+          Y +  AP+ + + L+  
Sbjct: 101 RYIRRFLDQRKFIEVETPMMNVIAGGATAKPFITHHNDLDMDMY-MRIAPELFLKQLVVG 159

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           G DR ++I   FR+E       P EF   +   ++ +  D+++  E +   + +E +
Sbjct: 160 GLDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTELMFSEMVKEIT 215



 Score = 43.9 bits (102), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  +  +REV LFP
Sbjct: 385 ALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLFP 420


>gi|302799643|ref|XP_002981580.1| hypothetical protein SELMODRAFT_114752 [Selaginella moellendorffii]
 gi|300150746|gb|EFJ17395.1| hypothetical protein SELMODRAFT_114752 [Selaginella moellendorffii]
          Length = 294

 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  GIDR+VMLL  + ++R+V  FP+
Sbjct: 253 ALEYGMPPTAGMGIGIDRLVMLLTDSPSIRDVIAFPV 289


>gi|6320242|ref|NP_010322.1| Krs1p [Saccharomyces cerevisiae S288c]
 gi|135139|sp|P15180|SYKC_YEAST RecName: Full=Lysyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|171799|gb|AAA66916.1| lysyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|1122359|emb|CAA92376.1| Krs1p [Saccharomyces cerevisiae]
 gi|1431484|emb|CAA98863.1| KRS1 [Saccharomyces cerevisiae]
 gi|190404990|gb|EDV08257.1| lysine-tRNA ligase [Saccharomyces cerevisiae RM11-1a]
 gi|207346823|gb|EDZ73202.1| YDR037Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|259145284|emb|CAY78548.1| Krs1p [Saccharomyces cerevisiae EC1118]
 gi|285811061|tpg|DAA11885.1| TPA: Krs1p [Saccharomyces cerevisiae S288c]
          Length = 591

 Score = 43.9 bits (102), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  +  +REV LFP
Sbjct: 539 ALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLFP 574



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 84/177 (47%), Gaps = 7/177 (3%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRII 149
           G++ +   ++++L+     LP   FG ++  +  R++ R+LDL  +   +N  + R+ II
Sbjct: 197 GEVSVFVSRVQLLTPCLHMLPADHFGFKD--QETRYRKRYLDLIMNKDARNRFITRSEII 254

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R  +    FIE  TP++   +    A+ F+          Y +  AP+ + + L+  
Sbjct: 255 RYIRRFLDQRKFIEVETPMMNVIAGGATAKPFITHHNDLDMDMY-MRIAPELFLKQLVVG 313

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           G DR ++I   FR+E       P EF   +   ++ +  D+++  E +   + +E +
Sbjct: 314 GLDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTELMFSEMVKEIT 369


>gi|209527681|ref|ZP_03276179.1| tRNA synthetase class II (D K and N) [Arthrospira maxima CS-328]
 gi|209491909|gb|EDZ92266.1| tRNA synthetase class II (D K and N) [Arthrospira maxima CS-328]
          Length = 325

 Score = 43.9 bits (102), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 25/251 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ-------VVANPDSACFEIAKSVRSEWVLCI 73
           +R+ G +   R  G I F+ + D     Q       V  +P     +I K      +L I
Sbjct: 65  LRVCGRITFKRDSGSIGFIGLTDASATIQLKIEKKLVTGDPGLTFNQIKK------LLDI 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--VFGEREYPESIRFKYRFL 131
              +     E I      G++ +   +++++S A  +P P   +G  + PE  R ++R +
Sbjct: 119 GDFI---GVEGIGCRTNRGELSIQVSRLDVISKAT-IPFPDSYYGIND-PELCR-RHREI 172

Query: 132 DLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQG 189
           DL  + T  +    R+RII S+R  +    F E  TP+L T      AR F+        
Sbjct: 173 DLVSNPTSLQRFKLRSRIIRSIRTYLWNAGFDEIETPVLQTIYGGAAARPFITHHNALDI 232

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A + + +  +  G ++ F+I   FR+E   S   P EF  +++  ++ +   I
Sbjct: 233 DLY-LRIATELFLKRAVCGGMEKVFEIGRVFRNEGIDSTHNP-EFTSIEVYQAYADYFQI 290

Query: 250 LNTMENVLRGV 260
           +  +E+++  V
Sbjct: 291 MALVEDLICAV 301


>gi|320120337|gb|EFE28440.2| asparagine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 469

 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 76/352 (21%), Positives = 129/352 (36%), Gaps = 61/352 (17%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFE-IAKSVRSEWVLCI 73
           VG  + + GW+   R      F+++ D   +   QVV   +   F+ I+K       LCI
Sbjct: 23  VGKEIVVEGWIRTNRSSKSFGFIELNDGTFFKNLQVVYEENLTDFKKISK-------LCI 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP-LPVFGEREYPESIRFKYRFLD 132
               +S     +         E+ A   EI+  AE  P  P+  +R   E +R     L 
Sbjct: 76  -ATAISVKGTLVETPGAKQPFEIKAS--EIIVEAESSPEFPLQKKRHTFEYLR-TISHLR 131

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R +T       R+    ++       NF+  +TPI+T S  EGA +      V    F 
Sbjct: 132 PRGNTYAAVFRVRSIAAYAIHKFFQERNFVYVNTPIITGSDAEGAGEMF---HVTTFDFN 188

Query: 193 ALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
            +P+                       Q +    A  +   +   P FR E+  + R   
Sbjct: 189 NIPKNSDNSIDYTKDFFKKSTNLTVSGQLEGECYALAYKNIYTFGPTFRSENSNTARHAA 248

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVS 271
           EF+ ++ E++F + +  ++  E +++ + +          EF N            +  S
Sbjct: 249 EFWMIEPEIAFSDLNGYMDLAEEMIKFIIDYVLEHAPEEMEFFNSFIDKGLLDRLNHVAS 308

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHN--VTEHFVHSEFRVFSKILSVN 321
           ++F RI Y +A+            PI   +   TEH  +    VF K L V 
Sbjct: 309 SDFKRITYTEAVELLQKSDKKFEYPIEWGSDLQTEHERYLTEEVFKKPLFVT 360


>gi|295107912|emb|CBL21865.1| asparaginyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 463

 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 100/260 (38%), Gaps = 30/260 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V + GWV  VR      F+ + D   +   QVV + +   F EI+K      ++    LV
Sbjct: 21  VSVGGWVRSVRGSKAFGFIVLHDGTFFETLQVVYHDNMPNFAEISKLNVGAAIIVKGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A+++++   A     P+  +R   E +R     L  R +T
Sbjct: 81  PTPEAKQ--------PFEIQAEEVQVEG-ASAPDYPLQKKRHTLEYLR-TMTHLRPRTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+    ++      + F+   TP++T S  EGA +    + ++  +       
Sbjct: 131 FQAVFRVRSLCAYAIHKFFQEKGFVYVHTPLITGSDCEGAGEMFQVTTLDMKNPPMNEDG 190

Query: 198 PQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              Y Q                    A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 191 TVDYSQDFFGKETNLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAEFWMIEPE 250

Query: 241 MSFVEQDDILNTMENVLRGV 260
            +F + DD ++  E +L+ V
Sbjct: 251 CAFADLDDNMDLAEEMLKYV 270



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + +      +G+  E  E +F    R +  G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDYDKLKARMDEMGLKAE--EYQFYMDLRKY--GSTRHSGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N CDL
Sbjct: 442 LTGMGNIRDVIPFPRTVNNCDL 463


>gi|151942029|gb|EDN60385.1| lysyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
          Length = 591

 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  +  +REV LFP
Sbjct: 539 ALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLFP 574



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 84/177 (47%), Gaps = 7/177 (3%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRII 149
           G++ +   ++++L+     LP   FG ++  +  R++ R+LDL  +   +N  + R+ II
Sbjct: 197 GEVSVFVSRVQLLTPCLHMLPADHFGFKD--QETRYRKRYLDLIMNKDARNRFITRSEII 254

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R  +    FIE  TP++   +    A+ F+          Y +  AP+ + + L+  
Sbjct: 255 RYIRKFLDQRKFIEVETPMMNVIAGGATAKPFITHHNDLDMDMY-MRIAPELFLKQLVVG 313

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           G DR ++I   FR+E       P EF   +   ++ +  D+++  E +   + +E +
Sbjct: 314 GLDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTELMFSEMVKEIT 369


>gi|119195055|ref|XP_001248131.1| hypothetical protein CIMG_01902 [Coccidioides immitis RS]
          Length = 529

 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 20/188 (10%)

Query: 95  ELSAQKIEILSVAEELPLPV---FGEREYPESI---RFKYRFLDLRRDTLHKNIVKRTRI 148
           EL A  ++++  A+    P+   +  +++  +I   RF+  F  L      + I + T +
Sbjct: 113 ELKATDVKLVGEADPQTYPIQKKYHSQDFLRTIPHLRFRTPFNSLLSRFRSECIYQATNV 172

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVNQGS-----FYALPQAPQQYK 202
            +S        NFI+   P++T+S  EGA + F V  R          ++  P+      
Sbjct: 173 FHSR----PGLNFIQVQPPLITSSDCEGAGEVFRVSPREAAAEGEDEEYFRAPKYLTVSS 228

Query: 203 QLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLR 258
           QL +   A+     + ++P FR E   + R   EFY L+ E++FV + D++   +E+ +R
Sbjct: 229 QLHLEAYAADLGNVWTLSPTFRAEKSDTPRHLSEFYMLEAELNFVNDLDELTKFVESFIR 288

Query: 259 GVFEEFSN 266
            + E+  N
Sbjct: 289 ELTEKLYN 296


>gi|3864|emb|CAA39699.1| lysine--tRNA ligase [Saccharomyces cerevisiae]
          Length = 591

 Score = 43.9 bits (102), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  +  +REV LFP
Sbjct: 539 ALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLFP 574



 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 84/177 (47%), Gaps = 7/177 (3%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRII 149
           G++ +   ++++L+     LP   FG ++  +  R++ R+LDL  +   +N  + R+ II
Sbjct: 197 GEVSVFVSRVQLLTPCLHMLPADHFGFKD--QETRYRKRYLDLIMNKDARNRFITRSEII 254

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R  +    FIE  TP++   +    A+ F+          Y +  AP+ + + L+  
Sbjct: 255 RYIRKFLDQRKFIEVETPMMNVIAGGATAKPFITHHNDLDMDMY-MRIAPELFLKQLVVG 313

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           G DR ++I   FR+E       P EF   +   ++ +  D+++  E +   + +E +
Sbjct: 314 GLDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTELMFSEMVKEIT 369


>gi|323355807|gb|EGA87621.1| Krs1p [Saccharomyces cerevisiae VL3]
          Length = 437

 Score = 43.9 bits (102), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  +  +REV LFP
Sbjct: 385 ALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLFP 420



 Score = 43.9 bits (102), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 84/177 (47%), Gaps = 7/177 (3%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRII 149
           G++ +   ++++L+     LP   FG ++  +  R++ R+LDL  +   +N  + R+ II
Sbjct: 43  GEVSVFVSRVQLLTPCLHMLPADHFGFKD--QETRYRKRYLDLIMNKDARNRFITRSEII 100

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             +R  +    FIE  TP++   +    A+ F+          Y +  AP+ + + L+  
Sbjct: 101 RYIRRFLDQRKFIEVETPMMNVIAGGATAKPFITHHNDLDMDMY-MRIAPELFLKQLVVG 159

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           G DR ++I   FR+E       P EF   +   ++ +  D+++  E +   + +E +
Sbjct: 160 GLDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTELMFSEMVKEIT 215


>gi|148826519|ref|YP_001291272.1| lysyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229845887|ref|ZP_04465999.1| lysyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|166229784|sp|A5UDN8|SYK3_HAEIE RecName: Full=Uncharacterized protein YjeA
 gi|148716679|gb|ABQ98889.1| lysyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229810891|gb|EEP46608.1| lysyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|301169555|emb|CBW29156.1| predicted lysyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 323

 Score = 43.9 bits (102), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 10/122 (8%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL----VCNGF-EIASGGIRNHMSE 502
           +E+ I   H P T  Q  +  +   D    + F++      + NGF E+A    + H  E
Sbjct: 204 KERPIAVYHFPST--QAALAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFE 261

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  F
Sbjct: 262 LDNQQRQKCELPTREIDERFLA---ALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 318

Query: 563 PM 564
            M
Sbjct: 319 AM 320



 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           KN++KR +II  +R        +E  TP+L+            + +FL P      + + 
Sbjct: 14  KNLLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFGEQSKTLW- 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI+  FR+E+   +R   EF  L+          ++N +
Sbjct: 73  LSTSPEYHMKRLLAAGSGPIFQISKVFRNEEA-GNRHNPEFTMLEWYRPHFHMHRLINEV 131

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 132 DDLLQQILD 140


>gi|45201132|ref|NP_986702.1| AGR037Cp [Ashbya gossypii ATCC 10895]
 gi|44985915|gb|AAS54526.1| AGR037Cp [Ashbya gossypii ATCC 10895]
          Length = 589

 Score = 43.9 bits (102), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 83/177 (46%), Gaps = 7/177 (3%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRI 148
           G+I +   +I++L+     LP   FG ++  +  R++ R+LDL   +D   +  + R++I
Sbjct: 197 GEISVFVSRIQLLTPCLHMLPADHFGFKD--QETRYRKRYLDLIMNKDARGR-FITRSKI 253

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           I  +R  +   +FIE  TP++   +        V    +      +  AP+ + + L+  
Sbjct: 254 ITYIRKFLDNRDFIEVETPMMNVIAGGATAKPFVTHHNDLDMQMYMRIAPELFLKQLVVG 313

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           G DR ++I   FR+E       P EF   +   ++ +  D+++  E +   + +E +
Sbjct: 314 GMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTELLFSEMVKEIT 369



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   G+DR+ M L  +  +REV LFP
Sbjct: 539 ALEYGLPPTGGWGCGVDRLAMFLTDSNTIREVLLFP 574


>gi|270157788|ref|ZP_06186445.1| asparaginyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289163943|ref|YP_003454081.1| asparagine tRNA synthetase [Legionella longbeachae NSW150]
 gi|269989813|gb|EEZ96067.1| asparaginyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288857116|emb|CBJ10931.1| asparagine tRNA synthetase [Legionella longbeachae NSW150]
          Length = 467

 Score = 43.9 bits (102), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 122/308 (39%), Gaps = 55/308 (17%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +    C D  +S V  +V + GWV   R    G+ F+ + D             +CF   
Sbjct: 5   FTIRQCLDGEIS-VDEYVTVRGWVKTRRDSKAGLSFISMHD------------GSCFSPI 51

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + V ++ +      V   +A    + I++G++  S  K +   +  E  + V G  E P+
Sbjct: 52  QIVATDKLTNYHDDVAKLTAGC--SLIVSGKLVASQGKGQTFEIQAEQVI-VVGWVENPD 108

Query: 123 S--IRFKYRFLDLRRDTLH-----KNIVKRTRI---INSMRCRMIAEN-FIECSTPILTA 171
           +  I+ K   L+  R+  H       I   TRI   ++    R   E  F    TPI+T+
Sbjct: 109 TYPIQAKRHTLEFLREVAHLRPRTNTISAVTRIRHCLSQAIHRFFHEQGFFWIHTPIITS 168

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQY----------KQLLMASG----------FD 211
           S  EGA +     RV+      +P+  Q            +  L  SG            
Sbjct: 169 SDCEGAGEMF---RVSTLDLLNVPKGEQGQIDFSKDFFGRETFLTVSGQLNVEAYCLAMS 225

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG----VFEEFSNG 267
           + +   P FR E+  + R   EF+ ++ E++F    D+ +  +++LR     V EE ++ 
Sbjct: 226 KVYTFGPTFRAENSNTSRHLAEFWMVEPEIAFAGLSDLCDLSQSMLRYLCKVVLEERADD 285

Query: 268 NTVSNNFL 275
               N F+
Sbjct: 286 MDFFNQFV 293


>gi|255732768|ref|XP_002551307.1| lysyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240131048|gb|EER30609.1| lysyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 595

 Score = 43.9 bits (102), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 89/178 (50%), Gaps = 9/178 (5%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRII 149
           G++ + A+ +++L+     LP   +G ++  +  R++ R+LDL   D+  +    R++II
Sbjct: 199 GELSVYARTVQLLTPCLHMLPTEHYGFKD--QEARYRKRYLDLIMNDSSRERFRVRSKII 256

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLLMA 207
             +R  +   +F+E  TPIL   +    A+ F+   + +N   F  +  AP+ + + L+ 
Sbjct: 257 QYIRKFLDNRDFVEVETPILNVIAGGATAKPFITHHNDLNMEMFMRI--APELFLKELVV 314

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
            G +R ++I   FR+E       P EF   +   ++ +  D+++  E +   + +E +
Sbjct: 315 GGMERVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTELMFSEMVKEIT 371



 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  +  +REV LFP
Sbjct: 540 ALEYGLPPTAGWGCGIDRLAMFLTDSNTIREVLLFP 575


>gi|197294192|ref|YP_001798733.1| asparaginyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|226695300|sp|B1V8X4|SYN_PHYAS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|171853519|emb|CAM11361.1| Asparaginyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 457

 Score = 43.9 bits (102), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 106/275 (38%), Gaps = 53/275 (19%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           +G  + ++GW+   R    +IF+++ D   +     V  N D    +I   ++    L +
Sbjct: 16  LGKKIIVNGWIRNCRFQKKLIFIELNDGTFLENFQIVYKNVDLE--KIKDILQIGTSLKV 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           +G +     +  N       +E+ AQ I +L           G  ++   I+ K      
Sbjct: 74  EGFLKKNEKQEKN-------LEILAQNITLL-----------GSSDFSYPIQPKKHSKSF 115

Query: 134 RRDTLHKNIVKRTRIINSM-RCRMIA----------ENFIECSTPILTASSPEGARDFL- 181
            R   H  +  RT++  ++ R R  A          + F   +TPI+T +  EGA +   
Sbjct: 116 LRTIPH--LRTRTKLFGAVFRIRSTAFFALHHFFHKKGFFHINTPIITPNDGEGAGELFQ 173

Query: 182 ------------VPSRVN-QGSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
                        PS +N Q  F+          Q +   MA   ++ +   P FR E  
Sbjct: 174 LTSLNLERLSQEKPSTINYQKDFFGKKVFLTVTGQLEAEAMALALNKVYTFGPTFRAEKS 233

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            + R   EF+ L+ EM+F +    L   + +L+ V
Sbjct: 234 NTPRHAAEFWMLEPEMAFCDLKQNLKVAQEMLQEV 268


>gi|282853230|ref|ZP_06262567.1| lysine--tRNA ligase [Propionibacterium acnes J139]
 gi|282582683|gb|EFB88063.1| lysine--tRNA ligase [Propionibacterium acnes J139]
          Length = 510

 Score = 43.9 bits (102), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 7/153 (4%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP    +E  E  R + R+ DL  R+   + +  R  I  ++R  +    F+E  TPIL
Sbjct: 161 PLPTL-HKELSEETRVRRRYADLVVREESRQMVRTRALITRAVRRALDERGFLEIETPIL 219

Query: 170 T-ASSPEGARDFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
                   AR F   + +N      +L  A + Y +  M  G DR +++   FR+E   S
Sbjct: 220 QLVHGGAAARPF--NTHLNAFDIDMSLRIALELYLKRAMVGGTDRVYEMGRVFRNEGIDS 277

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
                EF  L+  MS+  Q  I   +++++  V
Sbjct: 278 SH-SAEFSMLEAYMSWGNQFTIAEVIKDIIMAV 309



 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 15/92 (16%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG---------LYRAFQCG 532
           +DL+  G E  +G      SE++        ++K+ +    G             A + G
Sbjct: 420 WDLIIGGMERGTG-----FSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFLEALEFG 474

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            PP GG+  G+DR+VML   A  +RE  LFP+
Sbjct: 475 CPPMGGLGLGVDRLVMLFTNA-GIRETILFPL 505


>gi|282856149|ref|ZP_06265432.1| lysine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282585908|gb|EFB91193.1| lysine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 518

 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 25/36 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG+  G+DR+VM L   +++R+V  FP
Sbjct: 459 ALEQGLPPTGGLGIGMDRVVMFLTNCRSIRDVIFFP 494


>gi|255712337|ref|XP_002552451.1| KLTH0C05192p [Lachancea thermotolerans]
 gi|238933830|emb|CAR22013.1| KLTH0C05192p [Lachancea thermotolerans]
          Length = 591

 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L  +  +REV LFP
Sbjct: 540 ALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLFP 575



 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 89/179 (49%), Gaps = 11/179 (6%)

Query: 92  GQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDL--RRDTLHKNIVKRTRI 148
           G+I +   +I++L+     LP   FG ++  +  R++ R+LDL   +D      + R++I
Sbjct: 198 GEISVFVSRIQLLTPCLHILPADHFGFKD--QETRYRKRYLDLIMNKDA-RPRFITRSKI 254

Query: 149 INSMRCRMIAENFIECSTPILTA-SSPEGARDFLV-PSRVNQGSFYALPQAPQQYKQLLM 206
           I+ +R  +   NFIE  TP++   +    A+ F+   + +N   F  +  AP+ + + L+
Sbjct: 255 ISFIRRFLDERNFIEVETPMMNVIAGGATAKPFVTHHNDLNMDMFMRI--APELFLKELV 312

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
             G +R ++I   FR+E       P EF   +   ++ +  D+++  E +   + +E +
Sbjct: 313 VGGMERVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTEMLFSEMVKEIT 370


>gi|24217390|ref|NP_714873.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24202472|gb|AAN51888.1|AE011619_5 lysyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 338

 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 80/170 (47%), Gaps = 10/170 (5%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARD-FLV--PSRVNQGSFYALPQA 197
           +++R + ++ +R      N++E  TP L    S E   D FLV  PS+  +G    L  +
Sbjct: 23  LIQRAKFLSVLRKFFEKRNYLEMDTPCLKPVPSMEPYLDPFLVRSPSKKEKG---YLITS 79

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+   + +++ G ++ ++I   FR  +  S     EF  L+     +  + +++   ++L
Sbjct: 80  PEYSLKEILSKGLEKIYEITHTFRSGEEGSPFHSAEFLMLEFYTVGITLEGLMDFCTDLL 139

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRY---GTDKPDLRNPIIMHNVTE 304
             + +EF +         R+  +++++RY   G  K +L   I  H ++E
Sbjct: 140 EVLDQEFYSYGFNREQVQRMSVEESLKRYAFCGISKSELDRVITEHTLSE 189



 Score = 40.4 bits (93), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 27/38 (71%)

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            GL RA + G+P   GI+ G+DR+++ +LG  ++REVS
Sbjct: 286 SGLERALKEGIPDSCGISIGLDRLLLCILGGSSLREVS 323


>gi|73748671|ref|YP_307910.1| lysyl-tRNA synthetase-related protein [Dehalococcoides sp. CBDB1]
 gi|73660387|emb|CAI82994.1| lysyl-tRNA synthetase-related protein [Dehalococcoides sp. CBDB1]
          Length = 309

 Score = 43.5 bits (101), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 8/121 (6%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYALPQ 196
           L  N+  R +I+  +R     + F+E  TP+   S  PE    ++ P     G    L  
Sbjct: 12  LEDNLKSRMQILGLIRSFFNEQGFLEVETPVFVPSVVPER---YIKPVECQNG---YLST 65

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+ Y + ++ASG+   +QI+ CFRD +      P EF  L+      +   ++N  EN+
Sbjct: 66  SPELYMKRMLASGYTNIYQISRCFRDGEKGRHHNP-EFSMLEWYRVGADYLQMINDTENL 124

Query: 257 L 257
            
Sbjct: 125 F 125


>gi|322831143|ref|YP_004211170.1| lysyl-tRNA synthetase-related protein GenX [Rahnella sp. Y9602]
 gi|321166344|gb|ADW72043.1| lysyl-tRNA synthetase-related protein GenX [Rahnella sp. Y9602]
          Length = 325

 Score = 43.5 bits (101), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 10/95 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------VGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G      S    Q F          G+ +  V+N    L  A + 
Sbjct: 233 AERFEVYYKGIELANGFRELTDSREQRQRFEQDNRKRAARGLPQHPVDN---NLLDALEH 289

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           GMP   G+A G+DR++M+ LGA ++ +V  FP+++
Sbjct: 290 GMPECSGVALGVDRLIMIALGAASLSDVLAFPVTR 324


>gi|59712940|ref|YP_205716.1| lysyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|59481041|gb|AAW86828.1| predicted lysyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 328

 Score = 43.5 bits (101), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 10/92 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAF-------SNVGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G      ++  L  F        ++G++++ ++     L  A + 
Sbjct: 236 AERFEVYFKGIELANGFHELDNAKEQLMRFEEDNAKRKSMGLTEQPIDYH---LIAALEA 292

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+P   G+A GIDR++ML +G K++ +V+ FP
Sbjct: 293 GLPNCSGVALGIDRLIMLAMGEKHIDQVTAFP 324


>gi|260579928|ref|ZP_05847758.1| lysyl-tRNA synthetase analog [Haemophilus influenzae RdAW]
 gi|260093212|gb|EEW77145.1| lysyl-tRNA synthetase analog [Haemophilus influenzae RdAW]
          Length = 333

 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           KN++KR +II  +R        +E  TP+L+            + +FL P      + + 
Sbjct: 24  KNLLKRAKIIAKIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFGEQSKTLW- 82

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI+  FR+E+   +R   EF  L+          ++N +
Sbjct: 83  LSTSPEYHMKRLLAAGSGPIFQISKVFRNEEA-GNRHNPEFTMLEWYRPHFHMHRLINEV 141

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 142 DDLLQQILD 150



 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 10/120 (8%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL----VCNGF-EIASGGIRNHMSE 502
           +E+ I   H P T  Q  +  +   D    + F++      + NGF E+A    + H  E
Sbjct: 214 KERPIAVYHFPST--QAALAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFE 271

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  F
Sbjct: 272 LDNQQRQKCELPTREIDERFLA---ALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 328


>gi|329122843|ref|ZP_08251415.1| lysine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327472107|gb|EGF17545.1| lysine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 333

 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           KN++KR +II  +R        +E  TP+L+            + +FL P      + + 
Sbjct: 24  KNLLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFGEQSKTLW- 82

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI+  FR+E+   +R   EF  L+          ++N +
Sbjct: 83  LSTSPEYHMKRLLAAGSGPIFQISKVFRNEEA-GNRHNPEFTMLEWYRPHFHMHRLINEV 141

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 142 DDLLQQILD 150



 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 10/122 (8%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL----VCNGF-EIASGGIRNHMSE 502
           +E+ I   H P T  Q  +  +   D    + F++      + NGF E+A    + H  E
Sbjct: 214 KERPIAVYHFPST--QAALAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFE 271

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  F
Sbjct: 272 LDNQQRQKCELPTREIDERFLA---ALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 328

Query: 563 PM 564
            M
Sbjct: 329 AM 330


>gi|283834777|ref|ZP_06354518.1| lysyl-tRNA synthetase [Citrobacter youngae ATCC 29220]
 gi|291069023|gb|EFE07132.1| lysyl-tRNA synthetase [Citrobacter youngae ATCC 29220]
          Length = 325

 Score = 43.5 bits (101), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 3/51 (5%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+ ++ ++N    L  A + GMP   G+A G+DR+VML LGA+++ EV  F
Sbjct: 273 GLPQQPIDN---NLLEALKVGMPDCSGVALGVDRLVMLALGAESLAEVIAF 320


>gi|289750187|ref|ZP_06509565.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|289690774|gb|EFD58203.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T92]
          Length = 274

 Score = 43.5 bits (101), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 6/106 (5%)

Query: 121 PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGAR 178
           PE+ R + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR
Sbjct: 3   PEA-RVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATAR 61

Query: 179 DFLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            F+  + +N  S    L  AP+ Y + L   G +R F++   FR+E
Sbjct: 62  PFV--THINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 105


>gi|68057630|gb|AAX87883.1| putative lysyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|309751502|gb|ADO81486.1| Putative lysyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 333

 Score = 43.5 bits (101), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           KN++KR +II  +R        +E  TP+L+            + +FL P      + + 
Sbjct: 24  KNLLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFGEQSKTLW- 82

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI+  FR+E+   +R   EF  L+          ++N +
Sbjct: 83  LSTSPEYHMKRLLAAGSGPIFQISKVFRNEEA-GNRHNPEFTMLEWYRPHFHMHRLINEV 141

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 142 DDLLQQILD 150



 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 10/120 (8%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL----VCNGF-EIASGGIRNHMSE 502
           +E+ I   H P T  Q  +  +   D    + F++      + NGF E+A    + H  E
Sbjct: 214 KERPIAVYHFPST--QAALAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFE 271

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  F
Sbjct: 272 LDNQQRQKCELPTREIDERFLA---ALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 328


>gi|262340904|ref|YP_003283759.1| asparagine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272241|gb|ACY40149.1| asparagine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 468

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 4/78 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G  R    E++LQ   +    K    N+        + G  PH G   G DR+V  
Sbjct: 391 EVIGGSQREERYEILLQRIKDTNTDK----NKLWWYLDTRRFGSVPHSGFGLGFDRLVQF 446

Query: 550 LLGAKNVREVSLFPMSQN 567
           + G  N+R+V  FP + N
Sbjct: 447 ITGMNNIRDVIPFPRTPN 464


>gi|157147871|ref|YP_001455190.1| lysyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|166229783|sp|A8AMP1|SYK3_CITK8 RecName: Full=Uncharacterized protein YjeA
 gi|157085076|gb|ABV14754.1| hypothetical protein CKO_03677 [Citrobacter koseri ATCC BAA-895]
          Length = 325

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 3/51 (5%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+ ++ ++N    L  A + GMP   G+A G+DR+VML LGA+++ EV  F
Sbjct: 273 GLPQQPIDN---NLLEALKVGMPDCSGVALGVDRLVMLALGAESLAEVIAF 320


>gi|293374948|ref|ZP_06621244.1| asparagine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325844314|ref|ZP_08168090.1| asparagine--tRNA ligase [Turicibacter sp. HGF1]
 gi|292646425|gb|EFF64439.1| asparagine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325489181|gb|EGC91563.1| asparagine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 463

 Score = 43.5 bits (101), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 95/260 (36%), Gaps = 30/260 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V ++GWV   R      FL I D   +   Q V   +   F+  +  R    + + GLV 
Sbjct: 21  VEINGWVRNNRAQKAFGFLMINDGSFFETIQAVYEENLENFKEVQKFRVGSAVTVRGLVY 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFGEREYPESIRFKYRFLDLRRDT 137
                     I   ++ L           E  P+ P    RE+   +      L  R + 
Sbjct: 81  PTPGSKQPFEIKVQEVILEG------DCPENYPIQPKQHTREFLREVAH----LRPRTNL 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVPSRVNQG 189
                  R+ +  ++      +NF+   TPI+T S  EGA         DF    R  +G
Sbjct: 131 FSAVFRVRSLVAYAIHSYFQEKNFVYVHTPIITGSDAEGAGEMFQVTTLDFNNVPRTEEG 190

Query: 190 S------FYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +      F+A         Q +    A      +   P FR E+  + R   EF+ ++ E
Sbjct: 191 AVDFKQDFFAKSTNLTVSGQLEAETFALALRDVYTFGPTFRAENSNTQRHAAEFWMIEPE 250

Query: 241 MSFVEQDDILNTMENVLRGV 260
           ++F +  D ++  E +++ +
Sbjct: 251 IAFADLQDDMDLAEGMIKYI 270



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 15/89 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  G  R    E++ Q    +G+ KE ++      R+GG+          H
Sbjct: 378 DLLVPGVGELIGGSQREERLEILEQRMDEIGVPKEELDWYLDLRRYGGV---------KH 428

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G   G +R++M + G +N+R+V  FP +
Sbjct: 429 AGFGLGFERMIMYITGVENIRDVVPFPRT 457


>gi|291551155|emb|CBL27417.1| asparaginyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 463

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 61/306 (19%), Positives = 116/306 (37%), Gaps = 55/306 (17%)

Query: 21  VRLSGWVHRVRPHG--GIIFLDIRDHYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V + GW+  +R     G I L+   ++   Q+V +     F E++K      ++    LV
Sbjct: 21  VTVGGWIRSIRDSKTFGFIVLNDGSYFDTLQIVYHDKMENFAEVSKLNVGAAIIVKGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A+++ ++  A     P+  +R   E +R       LR  T
Sbjct: 81  ATPQAKQ--------PFEIQAEEV-VIEGASAPDYPLQKKRHSFEYLR---TISHLRPRT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
                V R R + +       ++  F+   TP++T S  EGA +    + ++  +     
Sbjct: 129 NTFQAVFRVRSLAAYAIHQFFQDRGFVYVHTPLITGSDCEGAGEMFRVTTLDMDNVPKNE 188

Query: 196 QAPQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                Y Q                    A  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 DGTVDYTQDFFGKETSLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVLRGV--------------FEEFSNG-------NTVSNNFLRI 277
            E++F + +D +   E +L+ V              F  F +        N V+++F R+
Sbjct: 249 PEIAFADLEDDMELAEAMLKYVINYVLENAAEEMNFFNSFVDKGLLDRLHNVVNSDFARV 308

Query: 278 CYDDAI 283
            Y +A+
Sbjct: 309 TYTEAV 314



 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + +L     +G+ +E     +G      + G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDYDKLLGRMKELGLKEE----DYGFYLDLRKYGSTRHAGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMSNIRDVIPFPRTVNNCEL 463


>gi|261254134|ref|ZP_05946707.1| lysyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260937525|gb|EEX93514.1| lysyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 323

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 12/112 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------V 511
           F   Q  +  +   D  S  A ++++   G E+A+G       +  L  F +       +
Sbjct: 213 FPASQAALAKINPQD--SRVADRFEVYFKGIELANGFHELDNPQEQLNRFESDNAKRIEM 270

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G++ + +++    L  A Q G+P   G+A GIDR++ML +G  ++ +V+ FP
Sbjct: 271 GLAPQPIDHH---LIAALQSGLPECAGVALGIDRLIMLAIGCDHIDQVTAFP 319


>gi|326331872|ref|ZP_08198159.1| lysine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325950369|gb|EGD42422.1| lysine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 505

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 13/101 (12%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGI--------RNHMSEVMLQAFSNVGISKEVVENRFG 523
           ND    K   +DL+  G E  +G          R  ++   L A      + ++ E+   
Sbjct: 405 NDEEPGKVLAWDLIIGGVERGTGFTELIDPVVQREVLTAQSLLAAGGDPEAMQLDED--- 461

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              RA + G PP GG+  G+DR +ML  GA  +RE  LFP+
Sbjct: 462 -FLRALEYGAPPMGGLGLGLDRAIMLFTGA-GIRETILFPL 500


>gi|240104072|ref|YP_002960381.1| asparagine synthetase A [Thermococcus gammatolerans EJ3]
 gi|239911626|gb|ACS34517.1| Asparaginyl-tRNA synthetase related protein (asnS) [Thermococcus
           gammatolerans EJ3]
          Length = 300

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +KQ+ +A G D+ F ++P  R E   +D  R   EF QLD E++    DD++  +E ++ 
Sbjct: 80  HKQMAVAMGIDKLFVLSPNVRLESRLADDGRHAYEFTQLDFEIARASMDDVMGLIEELIV 139

Query: 259 GVFEEF 264
           G+F E 
Sbjct: 140 GLFREL 145



 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 13/88 (14%)

Query: 482 YDL-VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPP 535
           YDL +  G+ E++SGG R    E +L    + G+S+E     +E    GL R       P
Sbjct: 211 YDLYLPEGYGEVSSGGEREWEYEKILAKIRSAGLSEEAFRPYLEVAKAGLLR-------P 263

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             G   G++R++  ++GAK++ EV  FP
Sbjct: 264 SAGAGIGVERLIRYIVGAKHIAEVQPFP 291


>gi|332994504|gb|AEF04559.1| lysyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 322

 Score = 43.5 bits (101), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 12/115 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV------- 511
           F   Q  +  +   D  S  A ++++   G E+A+G    + +    Q F          
Sbjct: 212 FPASQASLARINAQD--SRTADRFEVYFKGAELANGFHELNEASEQKQRFEQDNEKRRKN 269

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G   + ++ RF     A + G+P   G+A GIDR++ML +GA +++EV  FP+S+
Sbjct: 270 GQPVKPIDTRF---LSALENGLPHCAGVALGIDRLLMLKIGASHIQEVLNFPVSR 321


>gi|145628264|ref|ZP_01784065.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145630585|ref|ZP_01786365.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145636603|ref|ZP_01792270.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145638361|ref|ZP_01793971.1| lysyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|148828021|ref|YP_001292774.1| lysyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|161761274|ref|YP_248543.2| lysyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|166229785|sp|A5UHY5|SYK3_HAEIG RecName: Full=Uncharacterized protein YjeA
 gi|144980039|gb|EDJ89698.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144983975|gb|EDJ91417.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145270129|gb|EDK10065.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145272690|gb|EDK12597.1| lysyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|148719263|gb|ABR00391.1| lysyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 323

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           KN++KR +II  +R        +E  TP+L+            + +FL P      + + 
Sbjct: 14  KNLLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFGEQSKTLW- 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI+  FR+E+   +R   EF  L+          ++N +
Sbjct: 73  LSTSPEYHMKRLLAAGSGPIFQISKVFRNEEA-GNRHNPEFTMLEWYRPHFHMHRLINEV 131

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 132 DDLLQQILD 140



 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 10/120 (8%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL----VCNGF-EIASGGIRNHMSE 502
           +E+ I   H P T  Q  +  +   D    + F++      + NGF E+A    + H  E
Sbjct: 204 KERPIAVYHFPST--QAALAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFE 261

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  F
Sbjct: 262 LDNQQRQKCELPTREIDERFLA---ALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 318


>gi|145519962|ref|XP_001445842.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413308|emb|CAK78445.1| unnamed protein product [Paramecium tetraurelia]
          Length = 557

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 12/85 (14%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF----QCGMPPHGGIAAGIDR 545
           E+  G  R    +V+ Q  +  G+  EV        YR +    + G  PH G   G +R
Sbjct: 480 ELIGGSQREERYDVLAQRITECGLKLEV--------YRPYLDLRRYGTVPHSGFGLGFER 531

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCD 570
           +VM++ G +N+R+V  FP      D
Sbjct: 532 LVMMITGVENIRDVIPFPRYHGSAD 556



 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 106/274 (38%), Gaps = 33/274 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIA 62
           R     + G S +G  V ++GW   VR    + F+++ D   +   Q+V +     F   
Sbjct: 87  RIQELLNAGDSYIGQTVTIAGWAKTVRAQKNLCFVELNDGTSFAGLQIVISEKIKNFADI 146

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQ-KIEILSVAEELPLPVFGEREYP 121
                 + L + G V+   A+     +I   ++ + + ++ I+  A+    P+    + P
Sbjct: 147 IKTNVGFSLKMTGSVVQSPAK---GQLIEMLVDDNLKHEVIIVGCADPQEYPMAKGTQKP 203

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARD 179
           E++R K     LR  +     V R R   +    +  +N   +   TP++T S  EGA D
Sbjct: 204 ETLRQKAH---LRPRSNFFGAVTRIRNNLAYATHVFFQNNGCLYIHTPVITGSDCEGAGD 260

Query: 180 FLVPSRVNQGSFYALPQ------APQQY---KQLLMASG----------FDRYFQIAPCF 220
               + +       +PQ        Q +   +  L  SG              +   P F
Sbjct: 261 MFKVTTIFDNDLQKVPQLNGKVDVTQDFFKKETKLTVSGQLQVENFCVSMSNVYTFGPTF 320

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           R E   + R   EF+ ++ E +F    D+ + ME
Sbjct: 321 RAEKAHTHRHLAEFWMIEPEFAFA---DLFDNME 351


>gi|225377738|ref|ZP_03754959.1| hypothetical protein ROSEINA2194_03389 [Roseburia inulinivorans DSM
           16841]
 gi|225210415|gb|EEG92769.1| hypothetical protein ROSEINA2194_03389 [Roseburia inulinivorans DSM
           16841]
          Length = 471

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E +L   + +G+ +E     +G      + G   H G   G +R VM 
Sbjct: 394 EIIGGSQREDDYEKLLARINELGLKEE----DYGFYLDLRKYGSARHAGFGLGFERCVMY 449

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 450 LTGMSNIRDVIPFPRTVNNCEL 471



 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 55/266 (20%), Positives = 104/266 (39%), Gaps = 34/266 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           V   + + GWV  +R      F+ + D   +   QVV +     FE  + +     + + 
Sbjct: 25  VDQTIAIGGWVRNIRNSKNFGFIVVNDGTFFEPVQVVYSDVLENFEEVEKLNVGAAIIVT 84

Query: 75  GLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           G +++           T Q  E+ A+K+E+    E    P +  ++   S  +      L
Sbjct: 85  GKLVATPG--------TKQPFEIQAEKVEV----EGPSTPDYPLQKKKHSFEYLRTISHL 132

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVPSRVNQGS- 190
           R  T     V R R + +       +  +F+   TP++T S  EGA +    + ++  + 
Sbjct: 133 RPRTNTFEAVFRVRSLCAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDMNNL 192

Query: 191 -------------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+  P       QL     A  F   +   P FR E+  + R   EF
Sbjct: 193 PMTEDGKVDYSKDFFNKPTNLTVSGQLNGETYAMAFKNIYTFGPTFRAENSNTTRHAAEF 252

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGV 260
           + ++ E++F + +D +   E++L+ V
Sbjct: 253 WMIEPEIAFADLEDDMILAESMLKYV 278


>gi|294654499|ref|XP_456557.2| DEHA2A05412p [Debaryomyces hansenii CBS767]
 gi|199428932|emb|CAG84512.2| DEHA2A05412p [Debaryomyces hansenii]
          Length = 553

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 10/142 (7%)

Query: 129 RFLD--LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL----TASSPEGARDF-- 180
           R LD  +  D+  + ++K   +I ++R   +  +F+E  TPIL    T ++ E  +    
Sbjct: 198 RVLDYLVNADSKQRLMIKSI-VIQAIRQFFVKRDFMEVQTPILGGYGTGANAEPFKTISN 256

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            + S  +   +  L  AP+ + + L+ SGFD+ F+I   FR+E   S   P EF   +  
Sbjct: 257 ALKSTGDGSKYLQLRVAPELWLKKLVISGFDKIFEIGQNFRNEGIDSTHNP-EFTTCEFY 315

Query: 241 MSFVEQDDILNTMENVLRGVFE 262
            SF   ++++   E +   +F+
Sbjct: 316 QSFTNLNELMILTEELFVEIFD 337


>gi|159466544|ref|XP_001691469.1| tRNA synthetase, class II [Chlamydomonas reinhardtii]
 gi|158279441|gb|EDP05202.1| tRNA synthetase, class II [Chlamydomonas reinhardtii]
          Length = 551

 Score = 43.5 bits (101), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 27/37 (72%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G+PP GG+  G+DR+VM+L  + ++R+V  FP+
Sbjct: 513 ALEHGLPPTGGLGIGVDRLVMMLTDSPSIRDVIAFPL 549


>gi|221134000|ref|ZP_03560305.1| lysyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 328

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 12/111 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------V 511
           F   Q  +  LK ++     A ++++   G E+A+G       +   Q F+        +
Sbjct: 218 FPASQAALARLKADE--PGYAHRFEVYYKGLELANGYWELTDPKEQAQRFAKDNRYRNKL 275

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+    ++ R   L  A   G+P   G+A G+DR++ML LG K++ +V  F
Sbjct: 276 GLPNTTIDTR---LMAALNAGLPDCAGVALGVDRLIMLALGKKHINDVLSF 323


>gi|114319846|ref|YP_741529.1| tRNA synthetase, class II (D, K and N) [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226240|gb|ABI56039.1| tRNA synthetase, class II (D, K and N) [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 314

 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  L+  D     A +++L   G EIA+G           + F     +++  
Sbjct: 205 FPASQAALARLRPGD--PPVAERFELFMEGMEIANGYHELADPAEQRRRFRAEQQARDAR 262

Query: 519 ENRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             R      L  A + G+PP  G+A G+DR+VM+ LGA+ +  V  FP
Sbjct: 263 GERLPVDQRLLAALEAGLPPCAGVALGVDRLVMVALGAECIDAVWAFP 310


>gi|307186072|gb|EFN71804.1| Probable asparaginyl-tRNA synthetase, mitochondrial [Camponotus
           floridanus]
          Length = 419

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 80/194 (41%), Gaps = 37/194 (19%)

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           S SAE   A   +G+ EL A  I ++            E +YP + R KY   D  R  L
Sbjct: 36  SISAEGELALAPSGKTELRATNIHVIGTCN------VTEDQYPFAPRKKYD-QDYVRQYL 88

Query: 139 HKNIVKRTRIINSM-RCRMIA----------ENFIECSTPILTASSPEGA---------- 177
           H  +  RTR  +S+ R R +A            FI   TPILT++  EGA          
Sbjct: 89  H--LRPRTRRFSSLLRLRDLATMVINDHLRDRGFISVHTPILTSNDCEGAGEVFTVRPHS 146

Query: 178 RDFLVPSRV---NQGSFY----ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           ++ L   R    ++   Y    A      Q    ++A    + +   P FR E+ +S   
Sbjct: 147 KEILKDMRKEGQSEDEIYFNTSAFLTVSGQLHLEVVARALTKVYTFGPTFRAENSKSRLH 206

Query: 231 PGEFYQLDMEMSFV 244
             EFY L+ E++F+
Sbjct: 207 LSEFYMLEGEIAFI 220


>gi|302816976|ref|XP_002990165.1| hypothetical protein SELMODRAFT_428663 [Selaginella moellendorffii]
 gi|300142020|gb|EFJ08725.1| hypothetical protein SELMODRAFT_428663 [Selaginella moellendorffii]
          Length = 480

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           L+   + G+PP  G A GIDR+VMLL  + +++EV L+P  +   DL
Sbjct: 434 LHTLLEYGLPPCSGWACGIDRLVMLLTDSVDIKEVVLYPALKPAEDL 480


>gi|85713399|ref|ZP_01044402.1| asparaginyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85692778|gb|EAQ30773.1| asparaginyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 349

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 23/122 (18%)

Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ---QYKQ-------LLMASG- 209
           ++  STPI+T S  EGA +     RV+      +P+  Q    + Q        L  SG 
Sbjct: 40  YLWVSTPIITTSDCEGAGEMF---RVSTLDLMNVPKTEQGNVDFSQDFFGKEAFLTVSGQ 96

Query: 210 ---------FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
                      + +   P FR E+  + R   EF+ ++ E++F + DD+ +  E++L+ V
Sbjct: 97  LNVESYACSLSKVYTFGPTFRAENSNTSRHLSEFWMVEPEVAFADLDDVAHLAEDMLKYV 156

Query: 261 FE 262
           F+
Sbjct: 157 FK 158



 Score = 38.5 bits (88), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+ Q  + + +  E  E      YR  +  G  PH G  
Sbjct: 264 DVLAPGIGEIIGGSAREERLDVLDQRIAEMDLPAEEYE-----FYRDLRRYGTVPHAGFG 318

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            G +R+V  + G +N+R+V  FP
Sbjct: 319 LGFERLVSYVTGMQNIRDVIPFP 341


>gi|238750058|ref|ZP_04611561.1| lysyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238711602|gb|EEQ03817.1| lysyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 332

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN---VGISKEVVENRFG-GLYRAFQCGMP 534
           A ++++   G E+A+G       +  LQ F     V   + + +N     L  A + G+P
Sbjct: 240 AERFEVYFKGLELANGFHELTDGDEQLQRFEQDNRVRAKRGLPQNPIDMNLIAALKQGLP 299

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
              G+A G+DR+VML LGA+ + EV  FP++
Sbjct: 300 DCSGVALGVDRLVMLALGAERLSEVIAFPVN 330


>gi|150866377|ref|XP_001385955.2| asparaginyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149387633|gb|ABN67926.2| asparaginyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 511

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 10/116 (8%)

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGI 513
           A  PF MP+      K  D        YDL+     E+  G +R H    +++   N  +
Sbjct: 403 AEKPFYMPKS-----KNFDPQRPTVACYDLILPEIGELVGGSMREHNYNNLVEEMKNRNM 457

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           + + ++          + G  PHGG   G +R++  L G +NV+EV  FP     C
Sbjct: 458 NLDEMQ----WYLSTRENGTVPHGGFGMGFERLIAYLSGMENVKEVIPFPRVPQSC 509



 Score = 41.6 bits (96), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 63/294 (21%), Positives = 126/294 (42%), Gaps = 54/294 (18%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRD---HYGITQVVANP----DSACFEIAKS--VRSEW 69
           S +   G +  +R      F+D+ D   H  +  +V NP         ++ +S  V+ +W
Sbjct: 46  STILAQGHIKSIRQGKSAGFIDLSDGSAHLSLNVIVKNPLEVLSKLQLKVGQSIQVQGKW 105

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF--K 127
           V          S  T +  I+    +++     +  V+E+ P+     ++   S +F   
Sbjct: 106 V---------ESQGTQDYEIVYNFEDVAHSLRVVGDVSEQYPI-----QKKSSSYQFLRN 151

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-RDFLVPS-- 184
           +  L  R  TL   +  R+ + +S+       +F +   P++T+S  EGA   F V S  
Sbjct: 152 HPTLRHRTSTLASLLRFRSFVESSLFEFFNGNSFTKVVPPLITSSDCEGAGEQFSVESLS 211

Query: 185 RVNQ--------------GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           ++N+              G    L  + Q + ++L A   +R + + PCFR ED  ++R 
Sbjct: 212 KLNESRNKTTLSSEDHFFGKSTYLTVSTQLHLEVL-ALSLNRVWTLTPCFRAEDSNTNRH 270

Query: 231 PGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
             EF+ L+ E+ ++ + + + +  E+++R           V+N+  + C D +I
Sbjct: 271 LSEFWMLEAEICYLGDLNQLTSFTEDMIRH----------VANSLKQSCNDSSI 314


>gi|326791659|ref|YP_004309480.1| asparaginyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326542423|gb|ADZ84282.1| asparaginyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 463

 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 34/260 (13%)

Query: 23  LSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLVMS 79
           ++GWV  VR      F+++ D   +   Q+V       F E+AK      ++    LVM+
Sbjct: 23  VAGWVRTVRDSKTFGFIEVNDGTFFKSLQIVFEDTLENFKEVAKLGVGAAIIVTGDLVMT 82

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELP--LPVFGEREYPESIRFKYRFLDLRRDT 137
            + +           EL A +I I     E P   P+  +R   E +R +  +L  R +T
Sbjct: 83  PNQKQ--------PFELKATQIVIEG---ECPPEYPLQKKRHSFEYLR-QIAYLRPRTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVPSRVNQG 189
                  R+    ++       +F+   TP++TAS  EGA         D + P +   G
Sbjct: 131 FGAVFRVRSLAAYAIHKFFQERSFVYAHTPLITASDCEGAGEMFRVTTLDPVHPPKTENG 190

Query: 190 S------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+    +     QL     A  F   +   P FR E   + R   EF+ ++ E
Sbjct: 191 EVDFKEDFFGKMASLTVSGQLSAETFAMAFRDVYTFGPTFRAEKSNTPRHAAEFWMIEPE 250

Query: 241 MSFVEQDDILNTMENVLRGV 260
           ++F + +D +   E++++ V
Sbjct: 251 IAFADLEDDMRLAEDMVKFV 270



 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 15/89 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE-----VVENRFGGLYRAFQCGMPPH 536
           DL+  G  E+  G  R    EV+L+  + +G+ +E     +   RFGG           H
Sbjct: 378 DLLVPGIGELIGGSQREERLEVLLERMAELGLKEEDYWWYLDLRRFGGTR---------H 428

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G   G +R++M L G  N+R+V  FP +
Sbjct: 429 AGFGLGFERLIMYLTGMTNIRDVIPFPRT 457


>gi|283457248|ref|YP_003361818.1| lysyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283133233|dbj|BAI63998.1| lysyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 527

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 11/153 (7%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           P+PV   ++  E  R + R+LDL  RD   + + KR  I  ++R  +    +IE  TP+L
Sbjct: 165 PMPVL-HKDLNEETRVRQRYLDLMVRDEARELVKKRALITRTVRRVLEDHGYIEVETPVL 223

Query: 170 T-ASSPEGARDFLVPSRVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
                   AR F    R +  +F     +  A +   +  +  G DR ++I   FR+E  
Sbjct: 224 QLVHGGATARPF----RTHLNAFDQPMTMRIATELPLKRAVVGGIDRVYEIGRVFRNEGV 279

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            S   P EF  L+   ++ +Q  +   M+ +++
Sbjct: 280 DSTHSP-EFTTLECYETYADQFVMAERMKEIIQ 311



 Score = 41.6 bits (96), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 12/50 (24%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKN------------VREVSLFPM 564
           RA + G PP GG+  GIDR++MLL G ++            +RE  LFP+
Sbjct: 473 RALEHGAPPMGGLGLGIDRLIMLLAGDQDPERPGTVVRQPGIRETILFPL 522


>gi|323176020|gb|EFZ61612.1| lysyl-tRNA synthetase domain protein [Escherichia coli 1180]
          Length = 228

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 187 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 222


>gi|146331864|gb|ABQ22438.1| lysyl-tRNA synthetase-like protein [Callithrix jacchus]
          Length = 180

 Score = 43.1 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 119 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 154


>gi|308808187|ref|XP_003081404.1| pleckstrin homology (ISS) [Ostreococcus tauri]
 gi|116059866|emb|CAL55573.1| pleckstrin homology (ISS) [Ostreococcus tauri]
          Length = 458

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 23/165 (13%)

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIIT-GQIELSAQKIEILSVAEELP----LPV 114
           E+ K+ R  W +  DG ++      ++A  +T GQI LS   I+ +S+A E        +
Sbjct: 214 EMLKTWRKRWFVLKDGYLVWYKTNIVDARAVTRGQIPLST--IDNVSIASEAAAGRRFAI 271

Query: 115 FGEREYPESIRFKYRFLDLRR------DTLHKNIVKRTRII---NSMRCRMIAENFIECS 165
             +   P  +  +Y   D  R      + L K + +R+ ++   +S    ++ + + + +
Sbjct: 272 LVDGALPAKLGTRYLVADSERERTQWIEALQKGMRERSTVLSTGSSPAAELLRQGYAQVT 331

Query: 166 TPILT----ASSPEGARDFLVPSRVN---QGSFYALPQAPQQYKQ 203
           TP       A  P  A+ F  PS +    QG   A P AP+   Q
Sbjct: 332 TPTPAHHSPAPVPTPAQQFAEPSNIQIEFQGYASATPAAPKAQSQ 376


>gi|15602067|ref|NP_245139.1| lysyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|13431891|sp|P57824|SYK3_PASMU RecName: Full=Uncharacterized protein YjeA
 gi|12720425|gb|AAK02286.1| LysU [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 323

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 109/265 (41%), Gaps = 39/265 (14%)

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRM-NEWARSQGQPGLAYIFW---RLDESGNVAGMG 373
           LS +P Y +  + A G G     C    NE A  +  P    + W     D    +  + 
Sbjct: 73  LSTSPEYHMKRLLAAGSGPIFQLCHVFRNEEAGQRHNPEFTMLEWYRPHFDMYRLINEVD 132

Query: 374 PVAKH-LNIVNTEAIRVRLDMQDGDSCFFIAGDPL--KFCSFAADARNHIAQELGIINCN 430
            + +  L+   TE++  +   Q+     ++  DPL  +     A A+ +  Q+    + +
Sbjct: 133 DLLQQILDCKPTESLSYQFVFQE-----YVGLDPLSAEKAELVAKAKQYHLQQAEQEDRD 187

Query: 431 CFEFCWIMDFPFYEWNE----EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
                 ++ F F    E    +E  +   H P T  Q  +  +   D    + F++    
Sbjct: 188 T-----LLQFLFSTVVEPNIGKENPVAVYHFPAT--QAALAQISSEDHRVAERFEF--YY 238

Query: 487 NGFEIASGGIRNHMSEV--MLQAFSN-------VGISKEVVENRFGGLYRAFQCGMPPHG 537
            G E+A+G   + +++V   L  F         +G+ +  ++ R  G   A Q G+P   
Sbjct: 239 KGLELANGF--HELTDVNEQLHRFEQDNVQRQKMGLPQRQIDKRLLG---ALQAGVPNCS 293

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLF 562
           GIA G+DR++M+ LGA  + EV  F
Sbjct: 294 GIALGVDRLLMIALGANAIHEVMAF 318



 Score = 37.0 bits (84), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 61/132 (46%), Gaps = 14/132 (10%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD---------FLVPSRVNQGS 190
           +N++ R +II  +R        +E  TP+L   S  G  D         F+ P+     +
Sbjct: 14  ENLLARAKIIAEIRRFFTDRGLLEVETPVL---SEFGVTDVHLSTFNTTFISPTAEKSKA 70

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L  +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++
Sbjct: 71  LW-LSTSPEYHMKRLLAAGSGPIFQLCHVFRNEEAGQRHNP-EFTMLEWYRPHFDMYRLI 128

Query: 251 NTMENVLRGVFE 262
           N ++++L+ + +
Sbjct: 129 NEVDDLLQQILD 140


>gi|254482632|ref|ZP_05095870.1| tRNA synthetase class II (D, K and N) subfamily protein [marine
           gamma proteobacterium HTCC2148]
 gi|214036991|gb|EEB77660.1| tRNA synthetase class II (D, K and N) subfamily protein [marine
           gamma proteobacterium HTCC2148]
          Length = 317

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 10/89 (11%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFS-------NVGISKEVVENRFGGLYRAFQCGM 533
           +++L  +G E+A+G           + F        + G  ++ V+ R   L  A + GM
Sbjct: 227 RFELYVDGLELANGYSELTDPAEQRRRFQADNTRRRDTGFDEKPVDER---LLAALEAGM 283

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           P   G+A G DR++MLL G++++R+V  F
Sbjct: 284 PQCSGVALGFDRLLMLLTGSEDIRQVLAF 312


>gi|163802726|ref|ZP_02196616.1| lysyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173433|gb|EDP58255.1| lysyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 323

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 3/54 (5%)

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            VG+  + ++   G L  A + G+P   G+A G+DR++ML LG +++ +V+ FP
Sbjct: 269 EVGLQPQPID---GHLIGALEAGLPDCAGVALGVDRLIMLALGCEHIDQVTAFP 319


>gi|15223302|ref|NP_177254.1| SYNC3; ATP binding / aminoacyl-tRNA ligase/ asparagine-tRNA ligase/
           aspartate-tRNA ligase/ nucleic acid binding / nucleotide
           binding [Arabidopsis thaliana]
 gi|20140327|sp|Q9SSK1|SYNC3_ARATH RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic 3; AltName:
           Full=Asparagine--tRNA ligase 3; Short=AsnRS 3
 gi|5902407|gb|AAD55509.1|AC008148_19 Similar to asparaginyl-tRNA synthetases [Arabidopsis thaliana]
 gi|332197025|gb|AEE35146.1| asparaginyl-tRNA synthetase, cytoplasmic 3 [Arabidopsis thaliana]
          Length = 571

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 12/181 (6%)

Query: 13  GVSDVGSFVRLSGWVH--RVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G    G  VR+ GWV   R +  G   FL++ D      +    DS+ +++++ V +   
Sbjct: 42  GAKLAGQKVRIGGWVKTGRQQGKGTFAFLEVNDGSCPANLQVMVDSSLYDLSRLVATGTC 101

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + +DG++            +   IELS + +  +   +    P+   +  PE +R     
Sbjct: 102 VTVDGVLKIPP----EGKGLKQSIELSVETVIAVGTVDPTTYPLPKTKLTPEFLR---DV 154

Query: 131 LDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVN 187
           L LR  T   + V R R  +  +        +F+   TPI+T S  EGA + F V + +N
Sbjct: 155 LHLRSRTNLISAVARIRNALAFATHSFFQEHSFLYIHTPIITTSDCEGAGEMFQVTTLIN 214

Query: 188 Q 188
            
Sbjct: 215 H 215


>gi|307718187|ref|YP_003873719.1| asparaginyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306531912|gb|ADN01446.1| asparaginyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 457

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 111/277 (40%), Gaps = 56/277 (20%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVAN---PDSACFEIAKSVRSEWVLC 72
           G  + + GW+  VR    + FL + D       QVV +   PD A   + K +R+   + 
Sbjct: 18  GQRLEVYGWIRSVRESKQVAFLHLSDGSTTAPLQVVVDTQRPDLAS--VLKELRTGAAVK 75

Query: 73  IDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYP-ESIRFKYRF 130
           ++G        T+  +  T Q +E+ A+ + +L  A E         +YP +  R  + F
Sbjct: 76  VEG--------TLRPSPGTKQPVEVHAEALTVLGPAPE---------DYPLQKKRHSFEF 118

Query: 131 LDLRRDTLHKNIVKRTRIINS-MRCR----------MIAENFIECSTPILTASSPEGA-- 177
           L   R+  H  +  RT  I + MR R               F+   TPI+T    EGA  
Sbjct: 119 L---REIAH--LRPRTNTIGAVMRVRNTLAWEIHRFFQERGFLYVHTPIITTGDAEGAGA 173

Query: 178 --RDFLVPSRVN---QGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             R   +P          F+  P       Q +    A  F   +   P FR E+  + R
Sbjct: 174 LFRVTTLPPDAPYDPTEDFFGAPAFLTVSGQLEAEAYALAFVNVYTFGPTFRAENSHTPR 233

Query: 230 LPGEFYQLDMEMSFVEQDDILNTME----NVLRGVFE 262
              EF+ ++ EM+F + +  ++  +    ++L+ V E
Sbjct: 234 HLAEFWMVEPEMAFCDLEGDMHLAQEFITHLLKAVLE 270



 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 14/87 (16%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPHGG 538
           LV    EI  G  R    E +L     +G+  E  +      R+GG          PH G
Sbjct: 374 LVPRLGEIIGGSQREDDYERLLARMQELGMRIEAYQWYLDLRRYGGA---------PHAG 424

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMS 565
              G DR+V  + G +N+R+V  FP +
Sbjct: 425 FGLGFDRLVQYVSGMQNIRDVIPFPRT 451


>gi|162451080|ref|YP_001613447.1| lysine--tRNA ligase [Sorangium cellulosum 'So ce 56']
 gi|161161662|emb|CAN92967.1| Lysine--tRNA ligase [Sorangium cellulosum 'So ce 56']
          Length = 439

 Score = 43.1 bits (100), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 10/111 (9%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDL----VCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
           F  P   +  LK +D    + F+  +    +CNGF   +  +      +  QA +     
Sbjct: 329 FPAPFASLARLKPSDPRVCERFELYVAGVELCNGFGELTDPVEQRARLLADQA-ARAAQG 387

Query: 515 KEV--VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           K V  ++ RF     A + GMPP  G A G+DR+V L LGA ++ +V  FP
Sbjct: 388 KPVYPIDERF---LDALEEGMPPAAGNALGVDRLVALCLGAPSIGDVLAFP 435



 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 12/144 (8%)

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
           +R       F+E  TP +  S   G    L    V       L  +P+   + L++ G  
Sbjct: 146 VRALFAERGFLEVETPSMVPSP--GLDLHLDAFAVQAARPTFLITSPEYQMKRLLSGGVP 203

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           R FQ+A CFR  +   DR   EF  L+   +F   D+++   E ++R V        T+S
Sbjct: 204 RCFQLARCFRRGE-LGDRHNPEFTMLEWYRAFAGVDEVMADTEAIVRRVAGALGAEGTIS 262

Query: 272 NN---------FLRICYDDAIRRY 286
            +         F RI   +A  R+
Sbjct: 263 TSGKQVRLERPFPRISIGEAFARW 286


>gi|294786597|ref|ZP_06751851.1| lysine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315226184|ref|ZP_07867972.1| lysine--tRNA ligase [Parascardovia denticolens DSM 10105]
 gi|294485430|gb|EFG33064.1| lysine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315120316|gb|EFT83448.1| lysine--tRNA ligase [Parascardovia denticolens DSM 10105]
          Length = 572

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSN------VGISKEV-VENRFGGLYRAFQCGM 533
           ++DL   GFE+A+     +   V  Q F +       G S+ + ++  F     A   GM
Sbjct: 480 KWDLYVRGFELATAYSELNDPVVQRQRFVDQAKMALAGDSEAMDIDEDF---LEALGVGM 536

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP GG+  GIDR+++ L GA  +RE   FP+
Sbjct: 537 PPAGGMGMGIDRLLIALTGA-TIRETITFPL 566



 Score = 40.8 bits (94), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 52/251 (20%), Positives = 111/251 (44%), Gaps = 20/251 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           ++   FV L+G V  +R  GG+ F+ +   D   I  +V+  +     +   +  + V  
Sbjct: 126 AETDDFVGLAGRVLFLRNGGGLCFVQLAAGDGTHIQGMVSKREVGADSL--KLYKQLVDL 183

Query: 73  IDGLVMSR---SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            D L +     +++T   +I+  Q  ++++ +         PLP    +E  E  R +  
Sbjct: 184 GDHLFLHGRVIASKTGELSIMVDQWRIASKSLR--------PLPAL-HKELNEEQRTRKP 234

Query: 130 FLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187
           +L +  D   +++V+ R +++ S+R       F+E  TP+L T      AR F       
Sbjct: 235 YLGMIVDQKSRDMVRNRAKVVASLRRNFDQRGFLEAETPMLQTNHGGATARPFETHMNAF 294

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
             + + +  AP+ + + ++  G D+ F+I   FR+E       P EF  ++   ++   D
Sbjct: 295 DINLF-MRIAPELFLKRMLVGGIDKVFEINRDFRNEGADGTHAP-EFTMVEAYEAYGTYD 352

Query: 248 DILNTMENVLR 258
            +    +++++
Sbjct: 353 TMAKLTQSLVQ 363


>gi|218283447|ref|ZP_03489447.1| hypothetical protein EUBIFOR_02037 [Eubacterium biforme DSM 3989]
 gi|218215829|gb|EEC89367.1| hypothetical protein EUBIFOR_02037 [Eubacterium biforme DSM 3989]
          Length = 451

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 50/251 (19%), Positives = 104/251 (41%), Gaps = 20/251 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V L GWV   R    + F+ + D   +   QVV   +   F+    + +       G
Sbjct: 15  GQSVTLQGWVRTNRNSKAVGFIALNDGTTFSNVQVVYGENLENFDEVSKITT-------G 67

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             M  + + +         E+ A+ + +L + +    P+  +R   E +R +   +  R 
Sbjct: 68  SAMEVTGKLVCTPDAKQPFEIQAENVCVLGLCDH-DYPLQKKRHSFEFMR-EIPHVRPRA 125

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVNQ------ 188
           +T +     R+ +  ++        F+  +TP +T +  EGA + F V +R +       
Sbjct: 126 NTYYAMFRLRSVLSMAIHTFFQDRGFVYVNTPEITGNDAEGAGECFTVTTREDAKYDKDF 185

Query: 189 -GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
            G    L  + Q + +   A  +   +   P FR E+  + R   EF+ ++ E++F +  
Sbjct: 186 FGKHAQLTVSGQLHVEPF-ALAYRNVYTFGPTFRAENSNTTRHASEFWMIEPELAFADLA 244

Query: 248 DILNTMENVLR 258
           D ++ +E +++
Sbjct: 245 DNMDCIEEMIK 255



 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 14/81 (17%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPHGGIAAGID 544
           E+  G  R    +V++     +G+ +E ++      RFGG           H G   G D
Sbjct: 374 ELVGGSQREERYDVLVNRMKEMGMEQETLQWYLDLRRFGGC---------KHSGFGLGFD 424

Query: 545 RIVMLLLGAKNVREVSLFPMS 565
           R++M L G  N+R+V  +P +
Sbjct: 425 RMLMYLSGVANIRDVQPYPRT 445


>gi|86140788|ref|ZP_01059347.1| asparaginyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85832730|gb|EAQ51179.1| asparaginyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 479

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 24/206 (11%)

Query: 81  SAETINANIITGQ-----IELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDL 133
           +A  +  N+I  Q     +E+ A++I+IL  A  EE+   +   + +      +   L +
Sbjct: 65  AAIAVTGNLIESQGGGQAVEVEAKEIKILGDADPEEVKKTILSPKRHTLEKLREQAHLRV 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVPSR 185
           R +T    +  R+++  ++      E F   +TPI+T S  EGA         D   P +
Sbjct: 125 RTNTFGAVMRLRSQLSFAVHQYFQKEGFYYVNTPIVTGSDAEGAGEMFKVTALDMKNPPK 184

Query: 186 VNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
              G+      F+          QL     A G  + +   P FR E+  + R   EF+ 
Sbjct: 185 DEDGNIDYKKDFFGKETNLTVSGQLEGETYALGLGQIYTFGPTFRAENSNTSRHLAEFWM 244

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFE 262
           ++ E++F + D  ++  E+ ++ V +
Sbjct: 245 IEPEVAFCDLDMNMDLAEDFIKYVIQ 270


>gi|197287392|ref|YP_002153264.1| lysyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227358368|ref|ZP_03842708.1| lysyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|238693187|sp|B4EWY8|SYK3_PROMH RecName: Full=Uncharacterized protein YjeA
 gi|194684879|emb|CAR47023.1| putative lysyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227161404|gb|EEI46448.1| lysyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 325

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 3/54 (5%)

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +G+ ++ ++ RF     A + G+P   G+A G+DR++ML LG + + +V  FP+
Sbjct: 272 MGLPEQPIDERFLA---ALEAGLPECSGVALGVDRLIMLALGVERISDVIAFPV 322



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 12/162 (7%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR------DFLVPSRVNQGSFYAL 194
           N++K+ +I++++R        +E  TP+++ ++            F+ P   +QG    L
Sbjct: 15  NLLKKAKIVSNIRRFFADRGVLEVETPMMSQATVTDIHLCPFETQFVGPG-ASQGLKLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+     +Q+  CFR+E+      P EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAANSGPIYQMGRCFRNEEAGRYHNP-EFTMLEWYRPCFDMYRLMNEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           ++L+ V + E S   +    FLR    D +     DK  LR 
Sbjct: 133 DLLQEVLDCEASESLSYQQAFLRYLDIDPL---SADKEKLRE 171


>gi|90409171|ref|ZP_01217286.1| Lysyl-tRNA synthetase class II [Psychromonas sp. CNPT3]
 gi|90309716|gb|EAS37886.1| Lysyl-tRNA synthetase class II [Psychromonas sp. CNPT3]
          Length = 253

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 10/159 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  I+D  G  QV    D+   +   +   +W L   G ++  
Sbjct: 67  VSIAGRMMTRRIMGKASFATIQDMGGRIQVYVVRDNLAVDFYNTEFKKWDL---GDIIGA 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL-RRDTL 138
                     T ++ +   +I IL+ A   PLP  F      ES R++ R+LDL   D  
Sbjct: 124 QGRLFKTK--TNELSIKVSEIRILTKALR-PLPDKFHGLTDIES-RYRQRYLDLIANDNS 179

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +  + R +I+NS+R  +   +F+E  TP+L A  P GA
Sbjct: 180 RRTFILRNKIVNSIRQYLNDRDFMEVETPMLQA-IPGGA 217


>gi|285018513|ref|YP_003376224.1| asparaginyl-tRNA synthetase (asnrs) protein [Xanthomonas
           albilineans GPE PC73]
 gi|283473731|emb|CBA16234.1| probable asparaginyl-trna synthetase (asnrs) protein [Xanthomonas
           albilineans]
          Length = 466

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 56/280 (20%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFE--IAKSVRSEWVL 71
           VG  V + GWV   R    G+ F+++ D   +   QVVA      +E  + +      V+
Sbjct: 16  VGGEVTVRGWVRTRRDSKAGLSFVNVSDGSCFAPIQVVAPAALPNYEPEVKRLTAGCAVI 75

Query: 72  CIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               LV S+           GQ  E+ A+ IE+L   E+          YP  I+ K   
Sbjct: 76  ARGHLVASQG---------QGQSFEIQAESIEVLGWVED-------PETYP--IQPKAHS 117

Query: 131 LDLRRDTLH----KNIVKR-TRIINSMR---CRMIAEN-FIECSTPILTASSPEGARDFL 181
           L+  RD  H     N+    TRI N +     R   +N +   STPI+T S  EGA    
Sbjct: 118 LEFLRDVAHLRPRTNLFGAVTRIRNCLAQAVHRYFHQNGYHWISTPIITTSDAEGAGQMF 177

Query: 182 VPSRVNQGSFYALPQAPQQY----------KQLLMASG----------FDRYFQIAPCFR 221
              RV+      LP+  +            +  L  SG            + +   P FR
Sbjct: 178 ---RVSTLDLTNLPRDGKGQVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFR 234

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            E+  + R   EF+ ++ E++F +  +     E+ L+ +F
Sbjct: 235 AENSHTTRHLAEFWMIEPEIAFADLAEDARVAEDFLKSLF 274


>gi|167376054|ref|XP_001733836.1| asparaginyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165904855|gb|EDR29988.1| asparaginyl-tRNA synthetase, cytoplasmic, putative [Entamoeba
           dispar SAW760]
          Length = 451

 Score = 43.1 bits (100), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 8/116 (6%)

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGIS 514
           H P  M    M  + G+  L+      DL+  G  EI  G +R      ++ A+   G++
Sbjct: 342 HFPSKMKAFYMSKVPGHPDLTESV---DLLMPGVGEIVGGSMRIWDYNELMGAYKANGLN 398

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                + +    +  + G  PHGG   G++R+VM LLG  ++R+V L+P     C+
Sbjct: 399 P----DPYYWYTQQRKYGSCPHGGYGLGVERLVMWLLGEDHIRKVCLYPRYLERCE 450


>gi|73956990|ref|XP_861414.1| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 4 [Canis familiaris]
          Length = 557

 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 496 ALEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFP 531


>gi|325107799|ref|YP_004268867.1| asparaginyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324968067|gb|ADY58845.1| Asparaginyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 461

 Score = 43.1 bits (100), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 121/340 (35%), Gaps = 57/340 (16%)

Query: 18  GSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACF--EIAKSVRSEWVLC 72
           G  + +SGWV   R    G  F+++ D    G  Q+V + +   +   I K         
Sbjct: 14  GETLTISGWVRTRRDSKNGFSFVELNDGSCMGNLQIVVDGEVPGYADNIGK--------V 65

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +  + E   +     ++EL A +  +L +A+    P+   ++   S  F      
Sbjct: 66  TTGASVRFTGELKESPGKGQRVELVASEFSVLGLADPQSFPL---QKKGHSFEFLREIAH 122

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQG- 189
           LR  T     + R R   S       ++  F+   TPI+T S  EGA      + ++   
Sbjct: 123 LRPRTNTFGAIARVRNAASAAVHNFFQDRGFLYVHTPIITTSDCEGAGQMFHVTTLDLAR 182

Query: 190 ------------SFYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+A P +     QL   + A+     +   P FR E+  + R   EF
Sbjct: 183 LASLQTEIDYAQDFFAKPASLTVSGQLEAEIFATSLGPCYTFGPTFRAENSNTTRHLAEF 242

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
           + ++ EM F +    +   E  ++ V           N+ L  C DD          D  
Sbjct: 243 WMIEPEMPFFDLQANMQLAEEFIKSVI----------NHVLTSCGDDI---------DFF 283

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           N  I   V E   H     F+++    P  E   I  K G
Sbjct: 284 NKRIDKTVLETLEHIRDESFAQV----PYTEAIEILEKSG 319


>gi|262200161|ref|YP_003271369.1| lysyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|296439659|sp|D0LB45|LYSX_GORB4 RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|262083508|gb|ACY19476.1| lysyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 1138

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +  MPP GG+  G+DR+VML+ G +++RE   FPM
Sbjct: 1097 ALEYAMPPTGGLGVGVDRVVMLITG-QSIRESLAFPM 1132


>gi|194432221|ref|ZP_03064509.1| lysyl-tRNA synthetase, heat inducible [Shigella dysenteriae 1012]
 gi|194419424|gb|EDX35505.1| lysyl-tRNA synthetase, heat inducible [Shigella dysenteriae 1012]
          Length = 258

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 217 ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 252


>gi|83317631|ref|XP_731245.1| asparaginyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23491220|gb|EAA22810.1| asparaginyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 618

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 12/83 (14%)

Query: 490 EIASGGIR----NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
           EIA G  R    N + E M++   N+ +    +E R        + G  PH G   GIDR
Sbjct: 541 EIAGGSERETNLNILKEQMIKNKLNIDLYNPYLELR--------KYGNIPHSGFGLGIDR 592

Query: 546 IVMLLLGAKNVREVSLFPMSQNF 568
           ++M +L   N+R++  FP   N+
Sbjct: 593 LIMYILSMSNIRDIVPFPRYPNY 615


>gi|153862539|gb|ABS52743.1| putative lysyl-tRNA synthetase [Theileria uilenbergi]
          Length = 68

 Score = 42.7 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/50 (40%), Positives = 26/50 (52%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
           A + G+PP GG   GIDR+ M L    N++EV  FP  +   D    S S
Sbjct: 19  ALEYGLPPTGGWGMGIDRLTMFLSDKNNIKEVIFFPTMRPIADPTQKSQS 68


>gi|118566854|gb|ABL01746.1| unknown [Salmonella enterica subsp. enterica serovar Typhi]
          Length = 136

 Score = 42.7 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 12/110 (10%)

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R F+I   FR+E       P EF  +++ M++ +  D++   E++
Sbjct: 7   APELYLKRLVVGGFERVFEINRNFRNEGISVRHNP-EFTMMELYMAYADYKDLIELTESL 65

Query: 257 LRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY--GTDKPDLRN 295
            R + ++      V            F ++   +AI++Y   TD  DL N
Sbjct: 66  FRTLAQDVLGTTQVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDN 115


>gi|156042712|ref|XP_001587913.1| hypothetical protein SS1G_11155 [Sclerotinia sclerotiorum 1980]
 gi|154695540|gb|EDN95278.1| hypothetical protein SS1G_11155 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 279

 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNH-MSEVMLQAFSNVGISKEVVENRFGGL--YRAFQ-CGMPPHGGI 539
           LV    EI  G +R + + E++    +N  +  +  E  FG L  Y   +  G  PHGG 
Sbjct: 142 LVPEVCEIVGGSMREYRLPELISAMRANGMVRGDAGEEDFGSLKWYTELRRWGSVPHGGF 201

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             G DR++  L G +N+RE+  FP
Sbjct: 202 GLGFDRLLGYLAGVQNIREIVTFP 225


>gi|297520290|ref|ZP_06938676.1| lysyl-tRNA synthetase [Escherichia coli OP50]
          Length = 57

 Score = 42.7 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 16  ALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 51


>gi|115384700|ref|XP_001208897.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114196589|gb|EAU38289.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 527

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 109/264 (41%), Gaps = 52/264 (19%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE----WVLCID 74
           ++L+G+V  VR      F +I D   +   Q    P  A  E++     E    W  C  
Sbjct: 50  IKLNGFVRSVRKQKRFAFAEISDGSTVEPLQAFLKPAQAA-ELSTGTAVEISGIWKACPP 108

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G   +               EL A +++I+  A+        E++Y  S  F  +   LR
Sbjct: 109 GKEQTH--------------ELQATEVKIVGEADP-------EKKY-HSPEFLRQIPHLR 146

Query: 135 RDTLHKNIVKRTR------IINSMRCRMIAEN--FIECSTPILTASSPEGARD-FLVPSR 185
             T   +++ R R      + N  R    A N  F++   P++T+S  EGA + F V  R
Sbjct: 147 IRTPFNSLLSRFRSECLYQLGNVFRS---APNGGFVQVHPPLITSSDCEGAGETFTVVPR 203

Query: 186 VNQGS-------FYALPQAPQQYKQLLM---ASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
              GS       F+  P+      QL +   A+     + ++P FR E   + R   EFY
Sbjct: 204 EAMGSQQPDGEHFFRAPKYLTVSSQLHLEAYAAELGNVWTMSPMFRAEKSDTPRHLSEFY 263

Query: 236 QLDMEMSFVEQDDILNTM-ENVLR 258
            L+ E++F+   D L  + E++LR
Sbjct: 264 MLEAEVNFIYDLDALTGLVEHLLR 287


>gi|46202036|ref|ZP_00053901.2| COG2269: Truncated, possibly inactive, lysyl-tRNA synthetase (class
           II) [Magnetospirillum magnetotacticum MS-1]
          Length = 338

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 26/39 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   GMP   GIA G DR+VMLL GA+++ E+   P++Q
Sbjct: 300 ALDLGMPDSAGIALGFDRLVMLLAGAQSIDEILWAPVAQ 338



 Score = 37.4 bits (85), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 10/125 (8%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ---- 196
           N+  R+R +N+ R    A  F E  TP L  S   G    L          Y  P     
Sbjct: 8   NLDLRSRAVNATRAFFAARGFAEVETPCLQVSP--GLEPHLKAFATALTDPYGGPDRPLY 65

Query: 197 ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
              +P+   + L+ +G  R +Q+A  FR+ +  +   P EF  L+   +    DD+++  
Sbjct: 66  LHTSPEFAMKKLLVAGMPRLYQLAKVFRNAERSATHHP-EFTMLEWYRAGASLDDLMDDT 124

Query: 254 ENVLR 258
           E +++
Sbjct: 125 EALVQ 129


>gi|255284236|ref|ZP_05348791.1| asparagine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255265189|gb|EET58394.1| asparagine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 463

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 12/85 (14%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF----QCGMPPHGGIAAGIDR 545
           EI  G  R    E +LQ    +G+ +E         YRA+    + G   H G   G +R
Sbjct: 386 EIIGGSQREDSYEKLLQRMHELGLKEED--------YRAYLDLRKYGSTRHAGFGLGFER 437

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCD 570
            VM L G  N+R+V  FP +   C+
Sbjct: 438 CVMYLTGVSNIRDVIPFPRTVGNCE 462



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 40/265 (15%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           + + GWV  VR      FL + D   +   Q+V +     F EI K      V+    LV
Sbjct: 21  ITVGGWVRSVRDSKTFGFLVLHDGTFFETLQIVFHDKMDNFQEICKLNVGAAVIVKGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A ++ +    E    P +  ++   S+ F      LR  T
Sbjct: 81  ATPQAKQ--------PFEIQADEVTV----EGGSAPDYPLQKKRHSVEFLRTISHLRPRT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAE-----NFIECSTPILTASSPEGA--------RDFLVPS 184
              N+ + T  + S+    I +     +F+   TP++T S  EGA         D   P 
Sbjct: 129 ---NMFQATFRVRSLTAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDLENPP 185

Query: 185 RVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           +   G       F+          QL   + A  F   +   P FR E+  + R   EF+
Sbjct: 186 KTADGKVDYTKDFFGKQTNLTVSGQLNGEMYAQAFRNIYTFGPTFRAENSNTTRHAAEFW 245

Query: 236 QLDMEMSFVEQDDILNTMENVLRGV 260
            ++ E++F +  D +   E++L+ V
Sbjct: 246 MIEPEIAFADLKDDMILAEDMLKYV 270


>gi|150026281|ref|YP_001297107.1| asparaginyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149772822|emb|CAL44306.1| Asparagine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 478

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 110/277 (39%), Gaps = 61/277 (22%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG-LVMS 79
           V + GWV   R +  I   D    + I Q V + ++   E  K + +   + + G LV S
Sbjct: 19  VNVKGWVRTFRNNQFIALNDGSTIHNI-QCVVDFENTADETLKRITTGAAVSVTGALVES 77

Query: 80  RSAETINANIITGQ-IELSAQKIEIL--SVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           + A         GQ  E+   K+EIL  S AE+ P+     +  P         LD  R+
Sbjct: 78  QGA---------GQKYEVQVVKLEILGDSDAEKFPIQ---PKNKPS--------LDFLRE 117

Query: 137 TLHKNIVKRTRIINS-MRCRMI----------AENFIECSTPILTASSPEGARDFLVPSR 185
             H  +  RT +  + MR R +           + F+  +TPI+T S  EGA +     +
Sbjct: 118 NAHLRV--RTNMFGAIMRVRSVLSYAVHSYFQEKGFVYVNTPIITGSDAEGAGEMF---K 172

Query: 186 VNQGSFYALPQAPQ---QYKQLLM-----------------ASGFDRYFQIAPCFRDEDP 225
           V    F   P+       YK+                    A    + +   P FR E+ 
Sbjct: 173 VTALPFDNTPRTEDGNVNYKEDFFGKETNLTVSGQLEGETFAMALGQIYTFGPTFRAENS 232

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            + R   EF+ ++ E++F +  D ++  E+ ++ V +
Sbjct: 233 NTSRHLAEFWMIEPEVAFNDLTDNMDLAEDFIQYVIK 269


>gi|27904999|ref|NP_778125.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|46396878|sp|Q89A27|SYK3_BUCBP RecName: Full=Uncharacterized protein YjeA
 gi|27904397|gb|AAO27230.1| putative lysyl-tRNA synthetase [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 322

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 13/130 (10%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG--GIRNHMS 501
           E N   KK+ F ++ +   Q  + ++  ND  S  + ++++   G E+ +G   + +   
Sbjct: 198 EPNLNNKKLIFVYH-YPADQAILAAINDND--SRVSDRFEVFFKGVELGNGFYELTDQAE 254

Query: 502 EVMLQAFSNV-----GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
            +     +N+     GI    V+  F    ++   G+PP  GIA G+DR++ML L  K +
Sbjct: 255 HIRRFKLNNIQRRHKGICSVEVDQFF---LKSLSRGLPPCSGIAIGLDRLIMLSLNLKTI 311

Query: 557 REVSLFPMSQ 566
            EV  FP+ +
Sbjct: 312 NEVIAFPIER 321


>gi|119616029|gb|EAW95623.1| lysyl-tRNA synthetase, isoform CRA_e [Homo sapiens]
          Length = 583

 Score = 42.7 bits (99), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  + N++EV LFP
Sbjct: 522 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFP 557



 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E +
Sbjct: 285 APELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKM 343

Query: 257 LRGVFEEFSNGNTVS 271
           + G+ +  +    V+
Sbjct: 344 VSGMVKHITGSYKVT 358


>gi|210617003|ref|ZP_03291338.1| hypothetical protein CLONEX_03560 [Clostridium nexile DSM 1787]
 gi|210149526|gb|EEA80535.1| hypothetical protein CLONEX_03560 [Clostridium nexile DSM 1787]
          Length = 463

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 61/304 (20%), Positives = 112/304 (36%), Gaps = 51/304 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           + + GW+  +R      F+ + D   +   QVV +     F +I+K      ++    LV
Sbjct: 21  ITVGGWIRSIRDSKTFGFIVVNDGTFFETLQVVYHDTMENFADISKLNVGAAIIVKGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A ++ ++  A     P+  +R   E +R     L  R +T
Sbjct: 81  ATPQAKQ--------PFEIQATEV-VVEGASAPDYPLQKKRHSFEYLR-TISHLRPRTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+ I  ++        F+   TPI+T S  EGA +    + ++  +       
Sbjct: 131 FQAVFRVRSLIAYAIHQFFQERGFVYVHTPIITGSDCEGAGEMFRVTTLDMENIPKNEDG 190

Query: 198 PQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              Y Q                    A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 191 TVDYSQDFFNKETSLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAEFWMVEPE 250

Query: 241 MSFVEQDDILNTMENVLRGV--------------FEEFSNG-------NTVSNNFLRICY 279
           ++F + DD +   E +L+ +              F  F +        N  S++F R+ Y
Sbjct: 251 IAFADLDDNMMLAEAMLKYIINYVLENAPEEMNFFNSFVDKGLLDRLHNVASSDFARVTY 310

Query: 280 DDAI 283
            +AI
Sbjct: 311 TEAI 314



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E +L   + +G+  E  E +F    R +  G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDNYEKLLARMNEMGLKPE--EYQFYLDLRKY--GSTRHAGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMSNIRDVLPFPRTVNNCEL 463


>gi|197335731|ref|YP_002157129.1| putative lysyl-tRNA synthetase family protein GenX [Vibrio fischeri
           MJ11]
 gi|197317221|gb|ACH66668.1| putative lysyl-tRNA synthetase family protein GenX [Vibrio fischeri
           MJ11]
          Length = 318

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML +G K++ +V+ FP
Sbjct: 276 LIAALEAGLPNCSGVALGIDRLIMLAMGEKHIDQVTAFP 314


>gi|15807637|ref|NP_294994.1| asparaginyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 452

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 120/302 (39%), Gaps = 45/302 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSA--CFEIAKSVRSEWVLCI 73
           +G  V +  W+      G I FL +RD  G  Q  V   D A   FE AK +  E  + +
Sbjct: 19  IGQSVEVLAWLQDKSGKGKIQFLKLRDGSGFVQGTVFKGDVAEDVFEAAKRLTQEQAVRV 78

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGEREYPESIRFKYRFL 131
            G V  R+ E        G +ELS + + ++S  V E    P    +E+       +R L
Sbjct: 79  TGEV--RADER-----APGGVELSVRDLSVISENVGEYPITP----KEHGIEFLMDHRHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMI----AENFIECSTPILTASSPEGARDFLVPSRVN 187
            LR    H+      R+ + ++  ++     E F+    P  T ++ EG  +        
Sbjct: 128 WLR----HRRPWAIMRVRDCVQRGIVEFFHGEGFVRFDAPFFTPNAAEGTTELFEIDLFG 183

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           +   Y L Q  Q + +   A    +     P FR E  ++ R   EF+ ++ E++     
Sbjct: 184 EDKAY-LSQTGQLHAE-AGAFALRQGLHFGPTFRAEKSKTRRHLLEFWMVEPEVAPSSHA 241

Query: 248 DILNTMENVL----RGVFEEFSN-----GNTVSN-------NFLRICYDDA---IRRYGT 288
           + +   E ++    R V  E +      G  VS        N+ R+ Y +A   IR++  
Sbjct: 242 ENMALQERMVSHLARKVLSECAAELEMLGRDVSKLXGAAEGNYPRVTYTEALEIIRQHIE 301

Query: 289 DK 290
           DK
Sbjct: 302 DK 303


>gi|297625418|ref|YP_003687181.1| Lysyl-tRNA synthetase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296921183|emb|CBL55732.1| Lysyl-tRNA synthetase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 535

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G PP GG+  G+DR+VML  GA  +RE  LFP+
Sbjct: 495 ALEQGCPPMGGLGLGVDRLVMLFTGA-GIRETILFPL 530


>gi|28975406|gb|AAO61799.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus]
          Length = 76

 Score = 42.7 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 35  ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 70


>gi|153822283|ref|ZP_01974950.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae B33]
 gi|12655821|gb|AAK00611.1| lysyl-tRNA synthetase-like protein [Vibrio cholerae]
 gi|126520179|gb|EAZ77402.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae B33]
          Length = 51

 Score = 42.7 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 10  ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 45


>gi|301112569|ref|XP_002998055.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262112349|gb|EEY70401.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 270

 Score = 42.7 bits (99), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 5/117 (4%)

Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM-ASGFDRYFQIAPC 219
           ++E  TP L   +     ++      +Q +   L Q PQ YK +    +  +R F+I P 
Sbjct: 64  YVEIHTPKLVGGASVSGANYFTLKYFDQDA--TLAQCPQTYKHMACDVASLERVFEIGPG 121

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVL-RGVFEEFSNGNTVSNNF 274
           FR E   + R   E   LD+EM+       +L   E  L R + E++     + + F
Sbjct: 122 FRAETSNTHRHMCELVGLDLEMTIKAHYHKVLTEKEKWLGRLIKEKYDTDFYILDKF 178


>gi|319775232|ref|YP_004137720.1| putative lysyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|319897670|ref|YP_004135867.1| lysyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317433176|emb|CBY81550.1| putative lysyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317449823|emb|CBY86031.1| putative lysyl-tRNA synthetase [Haemophilus influenzae F3047]
          Length = 323

 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           KN++KR +II  +R        +E  TP+L+            + +FL P      + + 
Sbjct: 14  KNLLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFGEQSKTLW- 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI+  FR+E+  +   P EF  L+          ++N +
Sbjct: 73  LSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNCHNP-EFTMLEWYRPHFHMHRLINEV 131

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 132 DDLLQQILD 140



 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 10/120 (8%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL----VCNGF-EIASGGIRNHMSE 502
           +E+ I   H P T  Q  +  +   D    + F++      + NGF E+A    + H  E
Sbjct: 204 KERPIAVYHFPST--QAALAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFE 261

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  F
Sbjct: 262 LDNQQRQKCELPTREIDERFLA---ALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 318


>gi|289803678|ref|ZP_06534307.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 128

 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 87  ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 122


>gi|90581260|ref|ZP_01237057.1| lysyl-tRNA synthetase [Vibrio angustum S14]
 gi|90437499|gb|EAS62693.1| lysyl-tRNA synthetase [Vibrio angustum S14]
          Length = 322

 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)

Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           + NGF E+A+G  +    E   Q    +G+  + ++     L  A + G P   G+A GI
Sbjct: 242 LANGFHELANGDEQLQRFEQDNQKRLEMGLKPQPIDMN---LVNALRAGFPDCAGVALGI 298

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR++ML LG  ++ +V+ FP+ +
Sbjct: 299 DRLIMLALGLDHIEKVTAFPIDR 321


>gi|269103619|ref|ZP_06156316.1| lysyl-tRNA synthetase-related protein [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163517|gb|EEZ42013.1| lysyl-tRNA synthetase-related protein [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 323

 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 27/40 (67%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           L  A + G P   G+A GIDR++ML LG K++ +V+ FP+
Sbjct: 281 LVNALRAGFPDCAGVALGIDRLIMLALGLKHIDQVTAFPV 320


>gi|86160144|ref|YP_466929.1| tRNA synthetase, class II (D, K and N) [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85776655|gb|ABC83492.1| tRNA synthetase, class II (D, K and N) [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 340

 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MP  GG+A G DR++MLL GA ++ EV LFP +  F D
Sbjct: 304 MPEAGGVAVGFDRLLMLLTGAASIEEVLLFP-AHGFWD 340


>gi|256823215|ref|YP_003147178.1| lysyl-tRNA synthetase-like protein GenX [Kangiella koreensis DSM
           16069]
 gi|256796754|gb|ACV27410.1| lysyl-tRNA synthetase-related protein GenX [Kangiella koreensis DSM
           16069]
          Length = 316

 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 10/92 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAF-------SNVGISKEVVENRFGGLYRAFQC 531
           A +++L   G E+A+G      S   L  F        N G+++  ++  F     A + 
Sbjct: 224 AHRFELYIEGIELANGFYELADSSQQLARFEADNSWRKNNGLAEIAIDQHFIA---ALEY 280

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+P   G+A G+DR++M+ L  K +++V  FP
Sbjct: 281 GLPDCSGVALGLDRLLMIKLDTKEIQDVIAFP 312


>gi|152973029|ref|YP_001338175.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238892642|ref|YP_002917376.1| lysyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|262045412|ref|ZP_06018435.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330003261|ref|ZP_08304572.1| lysine--tRNA ligase-like protein GenX [Klebsiella sp. MS 92-3]
 gi|166229786|sp|A6TH74|SYK3_KLEP7 RecName: Full=Uncharacterized protein YjeA
 gi|150957878|gb|ABR79908.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238544958|dbj|BAH61309.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259037241|gb|EEW38489.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328537031|gb|EGF63317.1| lysine--tRNA ligase-like protein GenX [Klebsiella sp. MS 92-3]
          Length = 325

 Score = 42.7 bits (99), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 3/51 (5%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+ ++ ++N    L  A + G+P   G+A G+DR+VML LGA+++ EV  F
Sbjct: 273 GLPQQPIDN---NLLAALEAGLPDCSGVALGVDRVVMLALGAESIGEVIAF 320


>gi|206580741|ref|YP_002240886.1| lysyl-tRNA synthetase homolog GenX [Klebsiella pneumoniae 342]
 gi|288937542|ref|YP_003441601.1| lysyl-tRNA synthetase-related protein GenX [Klebsiella variicola
           At-22]
 gi|290512281|ref|ZP_06551648.1| lysyl-tRNA synthetase GenX [Klebsiella sp. 1_1_55]
 gi|238064861|sp|B5Y345|SYK3_KLEP3 RecName: Full=Uncharacterized protein YjeA
 gi|206569799|gb|ACI11575.1| lysyl-tRNA synthetase homolog GenX [Klebsiella pneumoniae 342]
 gi|288892251|gb|ADC60569.1| lysyl-tRNA synthetase-related protein GenX [Klebsiella variicola
           At-22]
 gi|289775276|gb|EFD83277.1| lysyl-tRNA synthetase GenX [Klebsiella sp. 1_1_55]
          Length = 325

 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 3/51 (5%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+ ++ ++N    L  A + G+P   G+A G+DR+VML LGA+++ EV  F
Sbjct: 273 GLPQQPIDN---NLLAALEAGLPDCSGVALGVDRVVMLALGAESIGEVIAF 320


>gi|197118436|ref|YP_002138863.1| lysine adenylyltransferase [Geobacter bemidjiensis Bem]
 gi|197087796|gb|ACH39067.1| lysine adenylyltransferase [Geobacter bemidjiensis Bem]
          Length = 302

 Score = 42.7 bits (99), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 19/158 (12%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQA 197
            + +V+R  I + +R     + ++E  TP  + A +PE   D  +P+     S + L  +
Sbjct: 10  RQALVERGAIFSRIREFFQEKGYLEVETPFRIPAPAPEAQID-AIPA-----SGWFLQTS 63

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+   + ++A+G+ R FQI  C+RD + R  R   EF  L+    +  + D L  ME   
Sbjct: 64  PELCMKRMLAAGYQRIFQICRCWRDGE-RGARHLSEFTMLEW---YRSEADYLVLMEETE 119

Query: 258 RGVFEEFSNGNT--------VSNNFLRICYDDAIRRYG 287
             V    + G+         +S  + RI   +A  RY 
Sbjct: 120 ALVQHAAATGSISYRGQQIELSGKWERITVANAFLRYA 157


>gi|213422536|ref|ZP_03355602.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 133

 Score = 42.4 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 92  ALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 127


>gi|169852011|ref|XP_001832693.1| asparaginyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|116506218|gb|EAU89113.1| asparaginyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 581

 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 8/69 (11%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD--------DILNTMENVL 257
           +A+G  R + ++PCFR E   + R   EF+ L+ E +F++Q         ++ + +E +L
Sbjct: 297 IATGLSRVYTLSPCFRAEPSLTGRHLAEFWMLEAEWAFIQQQHQNGGGVHEVCDVVEAML 356

Query: 258 RGVFEEFSN 266
           RG      N
Sbjct: 357 RGTVGPLVN 365



 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 13/112 (11%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISK 515
            PF M +  +   +G++     A  +DL+  G  E+  G +R    E++ +     G++ 
Sbjct: 470 KPFYMRENELREGEGDEGRGTVAC-FDLLVPGVGELVGGSVREERPEILSRKMREAGLAD 528

Query: 516 EVVENRFGGLYRAFQ----CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                  GG Y+ ++     G  PH G   G +R+V  + G +N+RE   FP
Sbjct: 529 -------GGAYKWYEDIRKYGGAPHAGFGMGFERLVSWVGGVENIRECIPFP 573


>gi|307104224|gb|EFN52479.1| hypothetical protein CHLNCDRAFT_138835 [Chlorella variabilis]
          Length = 624

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR  M+L    N++EV LFP
Sbjct: 419 ALEYGLPPTGGWGLGIDRFTMMLTDKNNIKEVLLFP 454


>gi|154278289|ref|XP_001539960.1| hypothetical protein HCAG_05427 [Ajellomyces capsulatus NAm1]
 gi|150413545|gb|EDN08928.1| hypothetical protein HCAG_05427 [Ajellomyces capsulatus NAm1]
          Length = 523

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 10/108 (9%)

Query: 161 FIECSTPILTASSPEGARDF--LVPSRVNQGS----FYALPQAPQQYKQLLM---ASGFD 211
           F++   P++T+S  EGA +   +VP     G+    F+  P+      QL +   A+   
Sbjct: 151 FVQVQPPLITSSDCEGAGEVFTVVPGDKVGGAEVEEFFRSPKYLTVSSQLHLEAYAAELG 210

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLR 258
             + ++P FR E   + R   EFY L++EM+FV+  D + + +E+++R
Sbjct: 211 NVWALSPTFRAEKSDTPRHLSEFYMLEVEMNFVQSVDSLTDIVESLIR 258


>gi|154484484|ref|ZP_02026932.1| hypothetical protein EUBVEN_02198 [Eubacterium ventriosum ATCC
           27560]
 gi|149734332|gb|EDM50249.1| hypothetical protein EUBVEN_02198 [Eubacterium ventriosum ATCC
           27560]
          Length = 463

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    EV+ +    +G++++  + +F    R +  G   H G   G +R++M 
Sbjct: 386 EIIGGSQREENYEVLTKRMEELGLNEK--DYQFYLDLRKY--GTARHAGFGLGFERMIMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMGNIRDVIPFPRTVNNCEL 463



 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 63/307 (20%), Positives = 116/307 (37%), Gaps = 55/307 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           + + GWV  +R      F+ + D   +   QVV +     F E++K+     ++    LV
Sbjct: 21  IEVGGWVRSIRDSKTFGFIVLNDGTCFKPLQVVYSDKLDNFGEVSKTNIGAALIVKGKLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELP-LPVFGEREYPESIRFKYRFLDLRRD 136
            + +A+               Q  E+    E  P  P+  +R   E +R     L  R +
Sbjct: 81  ATPNAKQ----------PFEIQADEVYVEGESTPDYPLQKKRHSFEYLR-TISHLRPRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------VPSRVN 187
           T       R+    ++      + F+   TP++T S  EGA +           VP +  
Sbjct: 130 TFQAVFRVRSLCAYAIHKFFQEQGFVYVHTPLITGSDCEGAGEMFQVTTMDLNNVP-KTE 188

Query: 188 QGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +G       F+  P       QL     A  F + +   P FR E+  + R   EF+ ++
Sbjct: 189 EGKVDYTEDFFGKPTNLTVSGQLNGETYAMAFKKIYTFGPTFRAENSNTTRHAAEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNNFLRI 277
            E++F +  D +   E +++ V              F  F +        + +++ F R+
Sbjct: 249 PEIAFADLADDMELAEAMIKYVIKYVLENAPEEMNFFNSFVDKGLLDRLNHVINSEFGRV 308

Query: 278 CYDDAIR 284
            Y +AI+
Sbjct: 309 TYTEAIK 315


>gi|304413224|ref|ZP_07394697.1| putative lysyl-tRNA synthetase [Candidatus Regiella insecticola
           LSR1]
 gi|304284067|gb|EFL92460.1| putative lysyl-tRNA synthetase [Candidatus Regiella insecticola
           LSR1]
          Length = 330

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 10/91 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------VGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G      S    Q F N       +G++   ++     L  A Q 
Sbjct: 238 AERFEVYYKGIELANGFDELTDSAEQRQRFENENNQRVNLGLAPASIDE---NLIAALQH 294

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+P   G+A G+DR++ML L AK + EV  F
Sbjct: 295 GLPACSGVALGVDRLIMLALNAKKISEVMAF 325


>gi|262197352|ref|YP_003268561.1| tRNA synthetase class II (D K and N) [Haliangium ochraceum DSM
           14365]
 gi|262080699|gb|ACY16668.1| tRNA synthetase class II (D K and N) [Haliangium ochraceum DSM
           14365]
          Length = 416

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 26/39 (66%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            L RA   G+P   GIA GIDR++ML+ GA ++REV  F
Sbjct: 373 ALLRALDEGLPACAGIALGIDRLLMLVTGASHIREVLTF 411



 Score = 37.7 bits (86), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 13/99 (13%)

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
           +F+E  TP+L  S   G    L P    +G +  L  +P+   + L+A+G +R + +  C
Sbjct: 117 DFLEVETPLLVGSP--GLEVHLDPVPAGRGQW--LITSPEFQMKRLLAAGLERVYTVCKC 172

Query: 220 FRDEDPRSDRLPG----EFYQLDMEMSFVEQDDILNTME 254
           F     R+D L      EF  ++   ++   DDIL   E
Sbjct: 173 F-----RADELGAQHNVEFTMIEWYRAWAGWDDILGDTE 206


>gi|27364671|ref|NP_760199.1| poxB regulator PoxA [Vibrio vulnificus CMCP6]
 gi|37681279|ref|NP_935888.1| lysyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|320155067|ref|YP_004187446.1| lysyl-tRNA synthetase-related protein [Vibrio vulnificus MO6-24/O]
 gi|33301726|sp|Q8DCX0|SYK3_VIBVU RecName: Full=Uncharacterized protein YjeA
 gi|39932253|sp|Q7MGX9|SYK3_VIBVY RecName: Full=Uncharacterized protein YjeA
 gi|27360816|gb|AAO09726.1| Lysyl-tRNA synthetase (class II) [Vibrio vulnificus CMCP6]
 gi|37200030|dbj|BAC95859.1| lysyl-tRNA synthetase-related protein [Vibrio vulnificus YJ016]
 gi|319930379|gb|ADV85243.1| lysyl-tRNA synthetase-related protein [Vibrio vulnificus MO6-24/O]
          Length = 323

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 12/112 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS-------NV 511
           F   Q  +  +  ND     A ++++   G E+A+G       +  L  F        ++
Sbjct: 213 FPASQAALAKINPND--PRVADRFEVYFKGIELANGFHELDNPQEQLTRFEQDNAKRIDM 270

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G++ + ++     L  A + G+P   G+A G+DR++ML LG  ++ E++ FP
Sbjct: 271 GLTPQPIDYH---LIAALESGLPACAGVALGVDRLIMLSLGCTHIDEITAFP 319


>gi|332291340|ref|YP_004429949.1| asparaginyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169426|gb|AEE18681.1| asparaginyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 480

 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 61/281 (21%), Positives = 107/281 (38%), Gaps = 43/281 (15%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + GWV   R   G  F+ + D   I   Q V + ++    + K + +   + I G     
Sbjct: 21  VKGWVRSFR---GNQFIALNDGSTINNLQCVVDFENTDEALLKRITTGAAVAIKG----- 72

Query: 81  SAETINANIITGQ-IELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              T+  +   GQ IE+  + I+I   A  +EL   +   + +      +   L +R +T
Sbjct: 73  ---TLEESQGGGQRIEIKVKDIQIEGDADPQELKNTILSPKRHTLEKLREQAHLRVRTNT 129

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV--------PSRVNQG 189
               +  R+++  ++        +    TPI+T S  EGA +           P R   G
Sbjct: 130 FGAVMRLRSKLSFAIHEYFNKNGYFHAHTPIITGSDAEGAGEMFRVSALDPENPPRTEDG 189

Query: 190 S------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+          QL     A G  + +   P FR E+  + R   EF+ ++ E
Sbjct: 190 KIDYSKDFFGKETNLTVSGQLEGETYALGLGKIYTFGPTFRAENSNTSRHLAEFWMVEPE 249

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
           M+F + D  ++  E+ ++ V           N  L  C DD
Sbjct: 250 MAFCDLDGNMDLAEDFIKYVI----------NYALENCQDD 280


>gi|329948250|ref|ZP_08295094.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328522774|gb|EGF49882.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 556

 Score = 42.4 bits (98), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 14/173 (8%)

Query: 111 PLPVFGEREYPESI------RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIE 163
           PLP     E  E++      R + R LDL      +++V+ R  ++ S+R      +++E
Sbjct: 195 PLPKTWTNEAGEAVTLSEEQRVRRRELDLLTRPAARDMVRTRAAVVRSIRENFFRRDYLE 254

Query: 164 CSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
             TP+L        AR F+          Y L  A + Y +  +  G DR F+I   FR+
Sbjct: 255 LETPMLQVVHGGAAARPFITHMNAFDMDLY-LRIATEIYLKRAVVGGVDRVFEINRNFRN 313

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDIL----NTMENVLRGVFEEFSNGNTVS 271
           E   S   P EF  L+   ++ + D +     N ++   R  F+    G  V+
Sbjct: 314 EGADSSHSP-EFTALEAYEAYSDYDGMAELTRNLVQQAARDAFDLPEGGEVVT 365



 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE A+         ++    E    A +       V++  F     A + G 
Sbjct: 466 KWDLYVRGFETATAYSELADPVVQRERFEAQALAAAKGDPEAMVLDEDF---LVAMEQGF 522

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP GG+  GIDR++M+L G + +RE   FP+
Sbjct: 523 PPSGGMGMGIDRLLMVLTG-QGIRETITFPL 552


>gi|120555692|ref|YP_960043.1| lysyl-tRNA synthetase-related protein GenX [Marinobacter aquaeolei
           VT8]
 gi|120325541|gb|ABM19856.1| lysyl-tRNA synthetase-related protein GenX [Marinobacter aquaeolei
           VT8]
          Length = 322

 Score = 42.4 bits (98), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 29/39 (74%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + G+P   G+A G+DR++ML LG++N+++V  FP+ +
Sbjct: 283 ALETGLPECAGVAMGLDRLLMLKLGSRNIQDVIAFPIER 321


>gi|253700783|ref|YP_003021972.1| tRNA synthetase class II (D K and N) [Geobacter sp. M21]
 gi|251775633|gb|ACT18214.1| tRNA synthetase class II (D K and N) [Geobacter sp. M21]
          Length = 305

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 16/158 (10%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQA 197
            + +V+R  I + +R     + ++E  TP  + A +PE   D  +P+     S + L  +
Sbjct: 10  RQALVERGAIFSRIREFFQEKGYLEVETPFRIPAPAPEAQID-AIPA-----SGWFLQTS 63

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+   + ++++G+ R FQI  C+RD + R  R   EF  L+   S  +   ++   E ++
Sbjct: 64  PELCMKRMLSAGYPRIFQICRCWRDGE-RGARHLSEFTMLEWYRSEADYLVLMEETEALV 122

Query: 258 RGVFEEFSNGN--------TVSNNFLRICYDDAIRRYG 287
           +      + G+         +S  + RI   DA  RY 
Sbjct: 123 QHAAATAATGSIGYRGYRIELSGKWERITVADAFLRYA 160


>gi|307297608|ref|ZP_07577414.1| tRNA synthetase class II (D K and N) [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916868|gb|EFN47250.1| tRNA synthetase class II (D K and N) [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 312

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 20/186 (10%)

Query: 122 ESI-RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           ESI R   R L+   D + K+ VK ++ I+      +  +NF+E    I++  +     +
Sbjct: 2   ESIGRLSSRVLEHLSDPVVKSAVKVKSAILGEASSFLRGKNFVELLPTIVSPITDPLNHE 61

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR---DEDPRSDRLPGEFYQ 236
                       Y L Q+   +KQL   S F+R F ++P  R    E   S R   EF Q
Sbjct: 62  VHTTRFTYYDQEYRLTQSMIFHKQLACKS-FERIFIVSPNVRLETSEKALSGRHLFEFSQ 120

Query: 237 LDME---------MSFVEQDDILNTMENVLRGVFEEF----SNGNTVSNNFLRICYDDAI 283
           +D+E         MS +E D I+  M +V R   EE     S+ +  S  F  + + DA 
Sbjct: 121 IDLEIRNAKREQIMSLIE-DLIITVMLSVKRNCSEEMDFLSSDPSIPSKPFATVKFMDAY 179

Query: 284 RRYGTD 289
            +YG D
Sbjct: 180 EQYGKD 185


>gi|222055870|ref|YP_002538232.1| tRNA synthetase class II (D K and N) [Geobacter sp. FRC-32]
 gi|221565159|gb|ACM21131.1| tRNA synthetase class II (D K and N) [Geobacter sp. FRC-32]
          Length = 307

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 8/115 (6%)

Query: 145 RTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
           R+ II  +R       ++E  TP+ + A +PE   D  VPS    G+++ L  +P+   +
Sbjct: 17  RSLIIQKIRQFFNEGGYLEVDTPLRIPAPAPESHID-AVPS----GNWF-LQTSPELCMK 70

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            ++A+G++R FQI  C+RD +     LP EF  L+      +  D+++  E ++R
Sbjct: 71  RMLAAGYERIFQICRCWRDGERGKRHLP-EFTMLEWYRLESDYRDLMDDCEALVR 124


>gi|260779586|ref|ZP_05888476.1| lysyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260604395|gb|EEX30699.1| lysyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 323

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 12/112 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------V 511
           F   Q  +  +   D  S  A ++++   G E+A+G      +   L+ F +       +
Sbjct: 213 FPASQAALARINRQD--SRVADRFEVYFKGIELANGFHELDNATEQLKRFESDNAKREQM 270

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G++ + ++N    L +A + G+P   G+A GIDR+VML     ++ +++ FP
Sbjct: 271 GLNTQPIDNH---LIKALEAGLPKCAGVALGIDRLVMLATSNDHIDKITAFP 319


>gi|58266942|ref|XP_570627.1| asparagine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57226860|gb|AAW43320.1| asparagine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 532

 Score = 42.4 bits (98), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 56/266 (21%), Positives = 103/266 (38%), Gaps = 37/266 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT----QVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V ++GW+  VR H  + F+++ D  G T    Q V    S                 +GL
Sbjct: 64  VEVNGWIKSVRAHKNVAFVEVSD--GSTGENIQAVLKGKSKA---------------EGL 106

Query: 77  VMSRSAET---INANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            +  SA+    +  +   GQ +EL  +  ++L   +    P+  ++  P S+      L 
Sbjct: 107 SIGASAKLKGRLEQSRGRGQDVELVVEDAQVLGTCDAEAYPI-QKKSLPASVLRDNAHLR 165

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVNQGSF 191
            R       +  R  +         + +F+   TPILT S  EGA + F +       S 
Sbjct: 166 FRTSQTAAVMRIRDALARDWHDWFESHDFVHVHTPILTGSDCEGAGEVFTIVDHPPPSSS 225

Query: 192 YALPQAPQQYKQLLMAS---------GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            +          L +++            R + ++P FR E   + R   EF+ L+ E++
Sbjct: 226 SSPQPFFPHPVHLTVSAQLHLEAPTHALSRTYTLSPSFRAEPSLTSRHLSEFHMLEAEVA 285

Query: 243 FV-EQDDILNTMENVLRGVFEEFSNG 267
           +  + D +L+ +E  ++       NG
Sbjct: 286 WENDLDGLLSVVEEGVKSTVGNILNG 311



 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 4/80 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+A G +R H    +  A   +G+ KE     +       + G  PHGG   G DR V  
Sbjct: 455 EMAGGSLREHRLTELTHAIEEMGMKKE----EYNWYLDLRKYGSAPHGGWGMGWDRWVGW 510

Query: 550 LLGAKNVREVSLFPMSQNFC 569
           + G  NVR+V  +   +  C
Sbjct: 511 VTGLGNVRDVVPYARWKGHC 530


>gi|256833305|ref|YP_003162032.1| lysyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686836|gb|ACV09729.1| lysyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 515

 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 119/289 (41%), Gaps = 37/289 (12%)

Query: 5   RTHSCG---------DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG------ITQ 49
           RTH+ G         +LG  +    V ++G V  +R  G + F+ I+D  G      ++Q
Sbjct: 46  RTHTIGQIRAGYAHLELG-EETEDVVGVAGRVVFLRNTGKLCFVAIQDGDGQRLQVMLSQ 104

Query: 50  VVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
                 S     A     + +     ++ SR  E    ++   Q  L+A+ +        
Sbjct: 105 GEVGAQSLADFKATVDLGDHLFAKGRVISSRRGEL---SVFASQWSLAAKSLR------- 154

Query: 110 LPLPVFGERE------YPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFI 162
            PLP    RE        E  R + R++DL  R         R++++ S+R    A +F+
Sbjct: 155 -PLPNLYAREDGTTAELSEEARVRQRYVDLIARPAARDAARLRSQVVRSLRDNFHARDFM 213

Query: 163 ECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           E  TP+L T      AR F+          Y L  AP+ + +  +  G +R F+I   FR
Sbjct: 214 EIETPMLQTIHGGAAARPFVTHMNAFDMDLY-LRIAPELFLKRAVVGGLERVFEINRNFR 272

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
           +E   S   P EF  L+   ++ + + +    +++++    +  +G T+
Sbjct: 273 NEGVDSSHSP-EFAMLEAYEAYGDYNTMAVLTQDLVQTAARDAFDGETL 320



 Score = 40.4 bits (93), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPH 536
           ++DL   GFE+A+         +  Q F    +     ++    L      A +  MPP 
Sbjct: 424 KWDLYVRGFELATAYSELVDPVIQRQRFEAQAVLAAAGDDEAMVLDEDFLTAMEYAMPPS 483

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GG+  G+DR++M L G   +RE  LFP+
Sbjct: 484 GGMGMGLDRLLMALTGL-GIRETILFPL 510


>gi|225467491|ref|XP_002266717.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
          Length = 314

 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 61/151 (40%), Gaps = 22/151 (14%)

Query: 155 RMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
           +   EN F+  S+PI+TAS  EGA +    + ++     A      Q      A+     
Sbjct: 14  KFFQENGFVWISSPIITASDCEGAGEQFCVTTLDFFGKPAFLTVSGQLNAETYATALSDV 73

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------E 263
           +   P FR E+  + R   EF+ ++ E++F + +D +      L+ V            E
Sbjct: 74  YTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYVVTYILENCKEDME 133

Query: 264 FSN-----------GNTVSNNFLRICYDDAI 283
           F N            +    NF+++ Y DA+
Sbjct: 134 FFNTWIEKGIINRLSDVAEKNFVQLTYTDAV 164


>gi|291528414|emb|CBK94000.1| asparaginyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 463

 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 64/162 (39%), Gaps = 38/162 (23%)

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVN--------------QGSFYALPQAPQQYKQL- 204
           +F+   TP++T S  EGA +    + ++                 F+  P       QL 
Sbjct: 153 DFVYVHTPLITGSDCEGAGEMFQVTTLDLNNLPMTEEGKVDFSKDFFNKPTNLTVSGQLN 212

Query: 205 --LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV-- 260
               A  F   +   P FR E+  + R   EF+ ++ E++F + +D +   E++L+ V  
Sbjct: 213 GETYAMAFKNIYTFGPTFRAENSNTTRHAAEFWMIEPEIAFADLEDDMMLAESMLKYVIN 272

Query: 261 ------------FEEFSNG-------NTVSNNFLRICYDDAI 283
                       F  F +        N V N+F R+ Y +AI
Sbjct: 273 YVLENAPEEMAFFNNFVDKGLLDRLRNVVENDFARVTYTEAI 314



 Score = 40.8 bits (94), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + +L   + +G+S++  + +F    R +  G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDYDKLLARINELGLSED--DYKFYLDLRKY--GSARHAGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMGNIRDVIPFPRTVNNCEL 463


>gi|148287356|emb|CAJ32470.1| Lysyl-tRNA synthetase [Morganella morganii]
          Length = 119

 Score = 42.4 bits (98), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 78  ALEHGLPPTAGLGIGIDRMVMLFTDSHTIRDVILFP 113


>gi|254781066|ref|YP_003065479.1| putative lysyl-tRNA synthetase protein [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040743|gb|ACT57539.1| putative lysyl-tRNA synthetase protein [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 355

 Score = 42.4 bits (98), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 23/35 (65%)

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           MP   GIA G DR+VML+ GA N+ EV   P SQ+
Sbjct: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350


>gi|291525477|emb|CBK91064.1| asparaginyl-tRNA synthetase [Eubacterium rectale DSM 17629]
          Length = 463

 Score = 42.4 bits (98), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 64/162 (39%), Gaps = 38/162 (23%)

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVN--------------QGSFYALPQAPQQYKQL- 204
           +F+   TP++T S  EGA +    + ++                 F+  P       QL 
Sbjct: 153 DFVYVHTPLITGSDCEGAGEMFQVTTLDLNNLPMTEDGKVDFSKDFFNKPTNLTVSGQLN 212

Query: 205 --LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV-- 260
               A  F   +   P FR E+  + R   EF+ ++ E++F + +D +   E++L+ V  
Sbjct: 213 GETYAMAFKNIYTFGPTFRAENSNTTRHAAEFWMIEPEIAFADLEDDMMLAESMLKYVIS 272

Query: 261 ------------FEEFSNG-------NTVSNNFLRICYDDAI 283
                       F  F +        N V N+F R+ Y +AI
Sbjct: 273 YVLENAPEEMAFFNNFVDKGLLDRLRNVVENDFARVTYTEAI 314



 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + +L   + +G+S++  + +F    R +  G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDYDKLLARINELGLSED--DYKFYLDLRKY--GSARHAGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMGNIRDVIPFPRTVNNCEL 463


>gi|238923388|ref|YP_002936904.1| asparaginyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238875063|gb|ACR74770.1| asparaginyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 463

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 64/162 (39%), Gaps = 38/162 (23%)

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVN--------------QGSFYALPQAPQQYKQL- 204
           +F+   TP++T S  EGA +    + ++                 F+  P       QL 
Sbjct: 153 DFVYVHTPLITGSDCEGAGEMFQVTTLDLNNLPMTEEGKVDFSKDFFNKPTNLTVSGQLN 212

Query: 205 --LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV-- 260
               A  F   +   P FR E+  + R   EF+ ++ E++F + +D +   E++L+ V  
Sbjct: 213 GETYAMAFKNIYTFGPTFRAENSNTTRHAAEFWMIEPEIAFADLEDDMMLAESMLKYVIS 272

Query: 261 ------------FEEFSNG-------NTVSNNFLRICYDDAI 283
                       F  F +        N V N+F R+ Y +AI
Sbjct: 273 YVLENAPEEMAFFNNFVDKGLLDRLRNVVENDFARVTYTEAI 314



 Score = 40.8 bits (94), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + +L   + +G+S++  + +F    R +  G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDYDKLLARINELGLSED--DYKFYLDLRKY--GSARHAGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP + N C+L
Sbjct: 442 LTGMGNIRDVIPFPRTVNNCEL 463


>gi|75761058|ref|ZP_00741057.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74491442|gb|EAO54659.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 267

 Score = 42.0 bits (97), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 55/250 (22%), Positives = 94/250 (37%), Gaps = 40/250 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
            G  V++SGW+  +R      F+++ D   +   Q+V + +   F EIAK   S  V   
Sbjct: 29  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSSVKVE 88

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             ++ +  A+           E+ A+KI+I  +++    P+  +R   E +R       L
Sbjct: 89  GKVIATPGAKQ--------PFEIKAEKIDIEGLSDS-DYPLQKKRHTFEYLR---TIAHL 136

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           R  T   +   R R I +       +   F+   TPI+T S  EGA +     RV     
Sbjct: 137 RPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMF---RVTTQDL 193

Query: 192 YALPQAPQ--------------------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
             +P+                       Q      A  F   +   P FR E+  + R  
Sbjct: 194 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 253

Query: 232 GEFYQLDMEM 241
            EF+ + + +
Sbjct: 254 AEFWMVSLRL 263


>gi|262190219|ref|ZP_06048494.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae CT 5369-93]
 gi|262033888|gb|EEY52353.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae CT 5369-93]
          Length = 155

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 114 ALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 149


>gi|145234338|ref|XP_001400540.1| asparaginyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS
           513.88]
 gi|134057486|emb|CAK48840.1| unnamed protein product [Aspergillus niger]
          Length = 574

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 13/226 (5%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           +IFL + D YG  Q V   +      A ++  E  + I G + +   +    N      E
Sbjct: 167 VIFLTLTDGYGYLQCVLTGNLCKTYDAMTLTLETSIAIHGEMRAVPPKQHAPN----NRE 222

Query: 96  LSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
           L A    I+  A    E +   V  + + P+++ +  R L LR +T    +  R   + +
Sbjct: 223 LHADFYTIIGRAAGDKEAITTRVAPDAD-PQTL-YDNRHLVLRGETASSVMKVRAATLRA 280

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
            R        +E + P +  +  EG           + ++  L Q+ Q Y +  + S  D
Sbjct: 281 FRKTFEENRMLEVTPPAMVQTQVEGGSTLFGFDYYGENAY--LTQSSQLYLETCLPSLGD 338

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
             F + P FR E   + R   E+  ++ E+ F+  +D+L+ +ENV+
Sbjct: 339 -VFCVCPSFRAEKSLTRRHLSEYTHIEAELDFITFNDLLDHLENVI 383


>gi|261188258|ref|XP_002620545.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239593292|gb|EEQ75873.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 615

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 13/140 (9%)

Query: 91  TGQIELSAQKIE----ILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-R 145
           TG+ ELS    E    I     ++PL +  +   P      +R + L       +I++ R
Sbjct: 194 TGRGELSVTASELPKLITPCLHDIPLRIKEQESSP-----YHRHVQLLSSPTAADILRAR 248

Query: 146 TRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQ 203
           + II  +R   + ++F+E  TPIL AS   GA  R F   +        +L  AP+ + +
Sbjct: 249 SSIIQYIRTFFLDKSFMEVETPIL-ASVAGGAVARPFETSATEFPDRPLSLRIAPELWLK 307

Query: 204 LLMASGFDRYFQIAPCFRDE 223
            L+  GFD+ F+I   FR+E
Sbjct: 308 RLVVGGFDKVFEIGQSFRNE 327



 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +A Q G+PP GG   G+DR+VML  GA  + +V  F
Sbjct: 570 QALQWGLPPTGGWGCGVDRLVMLFTGAGRIGDVLSF 605


>gi|89075323|ref|ZP_01161745.1| lysyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89048872|gb|EAR54441.1| lysyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 322

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)

Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           + NGF E+A+G  +    E   Q    +G+  + ++     L  A + G P   G+A GI
Sbjct: 242 LANGFHELANGDEQLQRFEQDNQKRLEMGLKLQPIDMN---LVNALRAGFPDCAGVALGI 298

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR++ML LG  ++ +V+ FP+ +
Sbjct: 299 DRLIMLALGLDHIEKVTAFPIDR 321


>gi|325067937|ref|ZP_08126610.1| lysyl-tRNA synthetase [Actinomyces oris K20]
          Length = 557

 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 14/173 (8%)

Query: 111 PLPVFGEREYPESI------RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIE 163
           PLP     E  E++      R + R LDL      +++V+ R  ++ S+R      +++E
Sbjct: 196 PLPKTWTNEAGEAVTLSEEQRVRRRELDLLTRPAARDMVRTRAAVVRSIRENFFRRDYLE 255

Query: 164 CSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
             TP+L        AR F+          Y L  A + Y +  +  G DR F+I   FR+
Sbjct: 256 LETPMLQVIHGGAAARPFITHMNAFDMDLY-LRIATEIYLKRAVVGGVDRVFEINRNFRN 314

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDIL----NTMENVLRGVFEEFSNGNTVS 271
           E   S   P EF  L+   ++ + D +     N ++   R  F+    G  V+
Sbjct: 315 EGADSSHSP-EFTALEAYEAYSDYDGMAELTRNLVQQAARDAFDLPEGGEVVT 366



 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE A+         ++    E    A +       +++  F     A + G 
Sbjct: 467 KWDLYVRGFETATAYSELADPVVQRERFEAQALAAAKGDPEAMILDEDF---LVAMEQGF 523

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP GG+  GIDR++M+L G + +RE   FP+
Sbjct: 524 PPSGGMGMGIDRLLMVLTG-QGIRETITFPL 553


>gi|126465244|ref|YP_001040353.1| aspartate-ammonia ligase [Staphylothermus marinus F1]
 gi|126014067|gb|ABN69445.1| aspartate-ammonia ligase [Staphylothermus marinus F1]
          Length = 417

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 10/156 (6%)

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R   +   I   + +    R  + ++ FIE   P+++ +S  G R          G  Y
Sbjct: 103 FRNSIISSTIKLLSYVTRYSRENLYSKGFIELLPPMISLASDPGLRGAKKLKTKYYGETY 162

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR---SDRLPGEFYQLDMEMSFVEQDDI 249
            L  +   +KQ  +A  +++ F  A   R+E P    + R   EF QLD+E +  + +D+
Sbjct: 163 ELTSSVIMFKQASVAV-YEKVFFTARNIREEPPENIWTGRHLSEFTQLDIEWAMSDLEDV 221

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +   E +L      ++    +++  + + YD   R+
Sbjct: 222 IRLAEELL------YTVSKIIADKHIDLIYDIGERK 251


>gi|161350024|ref|NP_438996.2| lysyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|1174524|sp|P43826|YJEA_HAEIN RecName: Full=Uncharacterized protein YjeA
          Length = 323

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 10/120 (8%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL----VCNGF-EIASGGIRNHMSE 502
           +E+ I   H P T  Q  +  +   D    + F++      + NGF E+A    + H  E
Sbjct: 204 KERPIAVYHFPST--QAALAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFE 261

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  F
Sbjct: 262 LDNQQRQKCELPTREIDERFLA---ALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 318



 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           KN +KR +II  +R        +E  TP+L+            + +FL P      + + 
Sbjct: 14  KNHLKRAKIIAKIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFGEQSKTLW- 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI+  FR+E+   +R   EF  L+          ++N +
Sbjct: 73  LSTSPEYHMKRLLAAGSGPIFQISKVFRNEEA-GNRHNPEFTMLEWYRPHFHMHRLINEV 131

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 132 DDLLQQILD 140


>gi|134110734|ref|XP_775831.1| hypothetical protein CNBD2410 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258497|gb|EAL21184.1| hypothetical protein CNBD2410 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 513

 Score = 42.0 bits (97), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 56/266 (21%), Positives = 103/266 (38%), Gaps = 37/266 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT----QVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V ++GW+  VR H  + F+++ D  G T    Q V    S                 +GL
Sbjct: 45  VEVNGWIKSVRAHKNVAFVEVSD--GSTGENIQAVLKGKSKA---------------EGL 87

Query: 77  VMSRSAE---TINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            +  SA+    +  +   GQ +EL  +  ++L   +    P+  ++  P S+      L 
Sbjct: 88  SIGASAKLKGRLEQSRGRGQDVELVVEDAQVLGTCDAEAYPI-QKKSLPASVLRDNAHLR 146

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVNQGSF 191
            R       +  R  +         + +F+   TPILT S  EGA + F +       S 
Sbjct: 147 FRTSQTAAVMRIRDALARDWHDWFESHDFVHVHTPILTGSDCEGAGEVFTIVDHPPPSSS 206

Query: 192 YALPQAPQQYKQLLMAS---------GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            +          L +++            R + ++P FR E   + R   EF+ L+ E++
Sbjct: 207 SSPQPFFPHPVHLTVSAQLHLEAPTHALSRTYTLSPSFRAEPSLTSRHLSEFHMLEAEVA 266

Query: 243 FV-EQDDILNTMENVLRGVFEEFSNG 267
           +  + D +L+ +E  ++       NG
Sbjct: 267 WENDLDGLLSVVEEGVKSTVGNILNG 292



 Score = 41.2 bits (95), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 4/80 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+A G +R H    +  A   +G+ KE     +       + G  PHGG   G DR V  
Sbjct: 436 EMAGGSLREHRLTELTHAIEEMGMKKE----EYNWYLDLRKYGSVPHGGWGMGWDRWVGW 491

Query: 550 LLGAKNVREVSLFPMSQNFC 569
           + G  NVR+V  +   +  C
Sbjct: 492 VTGLGNVRDVVPYARWKGHC 511


>gi|320533484|ref|ZP_08034159.1| lysyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320134309|gb|EFW26582.1| lysyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 566

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 14/173 (8%)

Query: 111 PLPVFGEREYPESI------RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIE 163
           PLP     E  E++      R + R LDL      +++V+ R  ++ S+R      +++E
Sbjct: 205 PLPKTWTNEAGEAVTLSEEQRVRRRELDLLTRPAARDMVRTRAAVVRSIRENFFRRDYLE 264

Query: 164 CSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
             TP+L        AR F+          Y L  A + Y +  +  G DR F+I   FR+
Sbjct: 265 LETPMLQVIHGGAAARPFITHMNAFDMDLY-LRIATEIYLKRAVVGGVDRVFEINRNFRN 323

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDIL----NTMENVLRGVFEEFSNGNTVS 271
           E   S   P EF  L+   ++ + D +     N ++   R  F+    G  V+
Sbjct: 324 EGADSSHSP-EFTALEAYEAYSDYDGMAELTRNLVQQAARDAFDLPEGGEVVT 375



 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE A+         ++    E    A +       +++  F     A + G 
Sbjct: 476 KWDLYVRGFETATAYSELADPVVQRERFEAQALAAAKGDPEAMILDEDF---LVAMEQGF 532

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP GG+  GIDR++M+L G + +RE   FP+
Sbjct: 533 PPSGGMGMGIDRLLMVLTG-QGIRETITFPL 562


>gi|8928398|sp|Q9Z614|SYK3_BUCAP RecName: Full=Putative uncharacterized protein YjeA
 gi|4378708|gb|AAD19636.1| lysyl-tRNA synthetase homolog [Buchnera aphidicola]
          Length = 324

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 16/115 (13%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF-LVPSRVNQGSF------- 191
           K+++KR++II  +R   + +N +E  TPIL+ S   G  D  L+P   N  SF       
Sbjct: 12  KDLMKRSKIIADIRSFFLKKNIMEVETPILSQS---GVTDVNLMPFITNYFSFNDNIKKK 68

Query: 192 -YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG----EFYQLDMEM 241
              L  +P+ + + L+++G    +QI   FR+++      P     E+YQL   M
Sbjct: 69  NLWLITSPEYHMKRLLSAGSGSIYQICRSFRNQEFGQYHNPEFTMLEWYQLSCSM 123


>gi|269966843|ref|ZP_06180916.1| Lysyl-tRNA synthetase-related protein [Vibrio alginolyticus 40B]
 gi|269828510|gb|EEZ82771.1| Lysyl-tRNA synthetase-related protein [Vibrio alginolyticus 40B]
          Length = 323

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 281 LISALEAGLPDCAGVALGIDRLIMLALGCDHIDQVTAFP 319


>gi|255086573|ref|XP_002509253.1| predicted protein [Micromonas sp. RCC299]
 gi|226524531|gb|ACO70511.1| predicted protein [Micromonas sp. RCC299]
          Length = 624

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 13/175 (7%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVH--RVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           H+C   G S +GS V + GWV   RV   G ++FL++ D  G    QVV   +    +  
Sbjct: 96  HACPGDGASLIGSTVVVGGWVKTGRVADKGALVFLEVNDGTGPKNLQVVVKAEVHAIDEL 155

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           KS  +   + ++G + +           T  +E+ A KI  +   +    P+  ++   E
Sbjct: 156 KSTGT--CVVVEGELKAPPEGA------TQVVEMHATKILHVGPCDAAKYPIAKKKISLE 207

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +R K   L  R +T+      R+ +  +         F+   TP++T S  EGA
Sbjct: 208 FLREKIH-LRTRTNTIAAIARIRSALSYATHSFFNKNGFLYVHTPLITQSDCEGA 261


>gi|90409366|ref|ZP_01217451.1| lysyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90309532|gb|EAS37732.1| lysyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 215

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLY-RAFQCGMPPH 536
           +++    G E+A+G    + ++   Q F +    K+  ++    +   Y  A + G+PP 
Sbjct: 122 RFEFFVGGRELANGFSELNDAQDQAQRFRDQVAQKDAGDDEAMFYDADYIVALEHGLPPT 181

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VML   +  +R+V LFP
Sbjct: 182 AGEGIGIDRLVMLFTDSHTIRDVLLFP 208


>gi|91228401|ref|ZP_01262327.1| lysyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91188042|gb|EAS74348.1| lysyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 323

 Score = 42.0 bits (97), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 281 LISALEAGLPDCAGVALGIDRLIMLALGCDHIDQVTAFP 319


>gi|28899612|ref|NP_799217.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153838013|ref|ZP_01990680.1| putative lysyl-tRNA synthetase homolog GenX [Vibrio
           parahaemolyticus AQ3810]
 gi|260361270|ref|ZP_05774378.1| lysine--tRNA ligase-like protein GenX [Vibrio parahaemolyticus
           K5030]
 gi|260876646|ref|ZP_05889001.1| lysyl-tRNA synthetase-like protein GenX [Vibrio parahaemolyticus
           AN-5034]
 gi|260898086|ref|ZP_05906582.1| lysine--tRNA ligase family protein GenX [Vibrio parahaemolyticus
           Peru-466]
 gi|260902325|ref|ZP_05910720.1| lysine--tRNA ligase-like protein GenX [Vibrio parahaemolyticus
           AQ4037]
 gi|33301719|sp|Q87KY6|SYK3_VIBPA RecName: Full=Uncharacterized protein YjeA
 gi|28807864|dbj|BAC61101.1| lysyl-tRNA synthetase-related protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149748621|gb|EDM59480.1| putative lysyl-tRNA synthetase homolog GenX [Vibrio
           parahaemolyticus AQ3810]
 gi|308085815|gb|EFO35510.1| lysine--tRNA ligase family protein GenX [Vibrio parahaemolyticus
           Peru-466]
 gi|308094021|gb|EFO43716.1| lysyl-tRNA synthetase-like protein GenX [Vibrio parahaemolyticus
           AN-5034]
 gi|308110944|gb|EFO48484.1| lysine--tRNA ligase-like protein GenX [Vibrio parahaemolyticus
           AQ4037]
 gi|308114249|gb|EFO51789.1| lysine--tRNA ligase-like protein GenX [Vibrio parahaemolyticus
           K5030]
 gi|328472261|gb|EGF43131.1| poxB regulator PoxA [Vibrio parahaemolyticus 10329]
          Length = 323

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 281 LISALEAGLPDCAGVALGIDRLIMLALGCDHIDQVTAFP 319


>gi|123436445|ref|XP_001309183.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121890898|gb|EAX96253.1| hypothetical protein TVAG_205400 [Trichomonas vaginalis G3]
          Length = 253

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 4/88 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           ++++  NG E A+     +   V  + F +   +K   ++           A +  +PP 
Sbjct: 144 RFEVFINGLEYANAYTELNCPMVQRELFLDQLKAKAAKDDEAMPYDDTFCTALEYALPPT 203

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            G   G+DR+VMLL    ++REV LFP+
Sbjct: 204 AGWGCGVDRLVMLLTNQVSIREVLLFPL 231


>gi|283780177|ref|YP_003370932.1| tRNA synthetase class II (D K and N) [Pirellula staleyi DSM 6068]
 gi|283438630|gb|ADB17072.1| tRNA synthetase class II (D K and N) [Pirellula staleyi DSM 6068]
          Length = 338

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG-----LYRAFQC-G 532
           A +++L  +G E+A+G      +EV LQ  + +  S+   E ++       L RA Q   
Sbjct: 245 AERFELYVDGIELANGYHELLDAEV-LQKRNAIAQSQRKSEGKYAPPMESELLRAMQASA 303

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +P   G A G+DR++M++  A+++ EV  FP+ +
Sbjct: 304 LPACSGTAVGVDRLLMVISQARSIDEVITFPIDR 337


>gi|225680694|gb|EEH18978.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 594

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 20/213 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLV 77
           V + G +   R  G  +IFLD+  +    Q++ N     A     +  +  + L   G V
Sbjct: 96  VVICGRIQSARSAGSKLIFLDLVQNGRKVQILCNQRHMDAMGVTPEKFKQFYHLLRRGDV 155

Query: 78  MSRSAETINANIITGQIELSAQKIE----ILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           +S     I     TG+ ELS    E    I     ++PL V  +   P       R + L
Sbjct: 156 LS----VIGNPHRTGRGELSVTVSELPKLITPCLHDIPLRVKEQETSPYD-----RHVQL 206

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS 190
                  +I++ R+ II  +R      +F+E  TPIL AS   GA  R F   +      
Sbjct: 207 LSSPTASDILRTRSAIIQYIRNFFFNRSFMEVETPIL-ASVAGGAVARPFQTCATEFPDR 265

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             AL  AP+ + + L+  GFD+ F+I P FR+E
Sbjct: 266 PLALRIAPELWLKRLVVGGFDKVFEIGPSFRNE 298



 Score = 40.8 bits (94), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           RA Q G+PP GG   G+DR+ ML  GA+ + +V  F
Sbjct: 549 RALQWGLPPTGGWGCGVDRLCMLFTGARRIGDVLSF 584


>gi|254230269|ref|ZP_04923659.1| putative lysyl-tRNA synthetase homolog GenX [Vibrio sp. Ex25]
 gi|262393012|ref|YP_003284866.1| lysyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937206|gb|EDN56074.1| putative lysyl-tRNA synthetase homolog GenX [Vibrio sp. Ex25]
 gi|262336606|gb|ACY50401.1| lysyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 323

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 281 LISALEAGLPDCAGVALGIDRLIMLALGCDHIDQVTAFP 319


>gi|291518461|emb|CBK73682.1| asparaginyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 466

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    +V+L+     G+ +E  + +F    R +  G   H G   G +R VM 
Sbjct: 389 EIIGGSQREDDYDVLLKRMQECGLKEE--DYQFYLDLRKY--GSSRHAGFGLGFERCVMY 444

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP +   CDL
Sbjct: 445 LTGMGNIRDVIPFPRTVGNCDL 466



 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 61/305 (20%), Positives = 115/305 (37%), Gaps = 52/305 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLV 77
           + ++GWV  +R      FL + D   +   QVV N D    F+    +     + + G+V
Sbjct: 23  ITVAGWVRNMRDSKTFGFLVLADGTFFNPVQVVFNQDKIDNFDEVCHLNVGAAVYVTGIV 82

Query: 78  -MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            ++  A+           E+ A K+ ++        P+  +R   E +R +   L  R +
Sbjct: 83  TLTPEAKQ--------PFEIQATKV-VVEGKSTPDYPIQPKRHTMEYLRTQTH-LRPRTN 132

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T       R+    ++       +F+   TP++T S  EGA +    + ++  +      
Sbjct: 133 TFQAVFRVRSLCAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQVTTMDLNNIPKTDD 192

Query: 197 APQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               + Q                    A  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 193 GKVDFSQDFFGHATNLTVSGQLNGETYAQAFKNIYTFGPTFRAENSNTTRHAAEFWMIEP 252

Query: 240 EMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLRIC 278
           E+SF + +D +   E++L+ V            +F N            +  +++F RI 
Sbjct: 253 EISFADLEDDMILAEDMLKYVINYVLEHAPEEMQFFNSFVDKGLLERLQHVANSDFGRIT 312

Query: 279 YDDAI 283
           Y DAI
Sbjct: 313 YTDAI 317


>gi|262165551|ref|ZP_06033288.1| asparaginyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262025267|gb|EEY43935.1| asparaginyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 414

 Score = 42.0 bits (97), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 95/242 (39%), Gaps = 45/242 (18%)

Query: 84  TINANIITGQ-IELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
           TI  +  +GQ  EL+A  ++++   E+    P+   R    SI +      LR  T    
Sbjct: 27  TIVESPASGQAFELAATAVKVVGWVEDADTYPMAKTRH---SIEYLREVAHLRPRTNVIG 83

Query: 142 IVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
            V R R  +  ++      + +   S P++TAS  EGA +    S ++  +         
Sbjct: 84  AVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTDAGKV 143

Query: 200 QYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            Y Q        L  SG            + +   P FR E+  + R   EF+ ++ E++
Sbjct: 144 DYNQDFFGKETFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVEPEVA 203

Query: 243 FVEQDDILNTMENVLRGVFE----------EFSNGNT-----------VSNNFLRICYDD 281
           F + + +    E++L+ VF+          EF N              V ++F ++ Y D
Sbjct: 204 FADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARLEKFVDSDFAQVDYTD 263

Query: 282 AI 283
           AI
Sbjct: 264 AI 265


>gi|50424139|ref|XP_460656.1| DEHA2F06820p [Debaryomyces hansenii CBS767]
 gi|49656325|emb|CAG88988.1| DEHA2F06820p [Debaryomyces hansenii]
          Length = 593

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ M L  +  +REV LFP
Sbjct: 542 ALEYGLPPTAGWGCGIDRLAMFLTDSNTIREVLLFP 577



 Score = 41.2 bits (95), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 84/167 (50%), Gaps = 9/167 (5%)

Query: 92  GQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           G++ + A  +++L+     LP   +G ++  +  R++ R+LDL  +   ++  K R++II
Sbjct: 201 GEVSVFATSVQLLTPCLHMLPTEHYGFKD--QEARYRKRYLDLIMNESTRDRFKVRSQII 258

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLLMA 207
           + +R  +   +F E  TP++   +    A+ F+   + +N   F  +  AP+ + + L+ 
Sbjct: 259 SFIRKFLDTRDFTEVETPMMNVIAGGATAKPFVTHHNDLNMDMFMRI--APELFLKELVV 316

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            G DR ++I   FR+E       P EF   +   ++ +  D+++  E
Sbjct: 317 GGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTE 362


>gi|1573850|gb|AAC22494.1| lysyl-tRNA synthetase analog (genX) [Haemophilus influenzae Rd
           KW20]
          Length = 333

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 10/120 (8%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL----VCNGF-EIASGGIRNHMSE 502
           +E+ I   H P T  Q  +  +   D    + F++      + NGF E+A    + H  E
Sbjct: 214 KERPIAVYHFPST--QAALAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFE 271

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  F
Sbjct: 272 LDNQQRQKCELPTREIDERFLA---ALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 328



 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           KN +KR +II  +R        +E  TP+L+            + +FL P      + + 
Sbjct: 24  KNHLKRAKIIAKIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFGEQSKTLW- 82

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI+  FR+E+   +R   EF  L+          ++N +
Sbjct: 83  LSTSPEYHMKRLLAAGSGPIFQISKVFRNEEA-GNRHNPEFTMLEWYRPHFHMHRLINEV 141

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 142 DDLLQQILD 150


>gi|330722514|gb|EGH00336.1| Lysyl-tRNA synthetase (class II) [gamma proteobacterium IMCC2047]
          Length = 251

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   + ++R+V LFP
Sbjct: 210 ALEYGLPPTAGEGIGIDRLVMLFTDSPSIRDVLLFP 245


>gi|325970662|ref|YP_004246853.1| lysine--tRNA ligase [Spirochaeta sp. Buddy]
 gi|324025900|gb|ADY12659.1| Lysine--tRNA ligase [Spirochaeta sp. Buddy]
          Length = 330

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 24/35 (68%)

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             MPP  G+A G+DR+ MLL+G  ++  V LFP+S
Sbjct: 285 SAMPPCSGVAMGLDRLQMLLMGKSDLEGVILFPLS 319


>gi|182415533|ref|YP_001820599.1| asparaginyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177842747|gb|ACB76999.1| asparaginyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 462

 Score = 42.0 bits (97), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 52/263 (19%), Positives = 103/263 (39%), Gaps = 30/263 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + + GWV   R      FL++ D   +   QV+A    A +   + + +   + + G ++
Sbjct: 20  ILVHGWVRTRRDAKTFSFLELNDGSCLKNLQVIAPATLANYTDVQHLTTGASVTVRGKLV 79

Query: 79  SRSAETINANIITGQI-ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
               +        GQ  E++A+ + ++  A+    P+  +   PE +R +   L  R + 
Sbjct: 80  PSQGQ--------GQKWEVTAEDVTVIGTADAT-YPLQKKGHTPEFLR-EIAHLRPRSNL 129

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVPSRVNQG 189
                  R+R+  ++        F+   TPI+T S  EGA         D   P +   G
Sbjct: 130 FGAVFRTRSRLAFAIHRFFQERGFVYVHTPIITGSDCEGAGELFRVTTHDLANPPKREDG 189

Query: 190 ------SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+A         Q +    A    + +   P FR E+  + R   EF+ ++ E
Sbjct: 190 LIDDAKDFFARRTYLTVSGQLEAEAFACALGKVYTFGPTFRAENSNTSRHANEFWMIEPE 249

Query: 241 MSFVEQDDILNTMENVLRGVFEE 263
           ++F +    ++  E  ++ +  E
Sbjct: 250 VAFCDLQGNMDLAEEFVKALIRE 272


>gi|237729093|ref|ZP_04559574.1| lysyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226908822|gb|EEH94740.1| lysyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 325

 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 26/38 (68%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LGA+++ EV  F
Sbjct: 283 LLEALKVGMPDCSGVALGVDRLVMLALGAESLAEVIAF 320


>gi|326773885|ref|ZP_08233167.1| lysine--tRNA ligase [Actinomyces viscosus C505]
 gi|326636024|gb|EGE36928.1| lysine--tRNA ligase [Actinomyces viscosus C505]
          Length = 562

 Score = 42.0 bits (97), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 14/173 (8%)

Query: 111 PLPVFGEREYPESI------RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIE 163
           PLP     E  E++      R + R LDL      +++V+ R  ++ S+R      +++E
Sbjct: 201 PLPKTWTNEAGEAVTLSEEQRVRRRELDLLTRPAARDMVRTRAAVVRSIRENFFRRDYLE 260

Query: 164 CSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
             TP+L        AR F+          Y L  A + Y +  +  G DR F+I   FR+
Sbjct: 261 LETPMLQVIHGGAAARPFITHMNAFDMDLY-LRIATEIYLKRAVVGGVDRVFEINRNFRN 319

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDIL----NTMENVLRGVFEEFSNGNTVS 271
           E   S   P EF  L+   ++ + D +     N ++   R  F+    G  V+
Sbjct: 320 EGADSSHSP-EFTALEAYEAYSDYDGMAELTRNLVQQAARDAFDLPEGGEVVT 371



 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE A+         ++    E    A +       +++  F     A + G 
Sbjct: 472 KWDLYVRGFETATAYSELADPVVQRERFEAQALAAAKGDPEAMILDEDF---LVAMEQGF 528

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP GG+  GIDR++M+L G + +RE   FP+
Sbjct: 529 PPSGGMGMGIDRLLMVLTG-QGIRETITFPL 558


>gi|302691556|ref|XP_003035457.1| hypothetical protein SCHCODRAFT_14619 [Schizophyllum commune H4-8]
 gi|300109153|gb|EFJ00555.1| hypothetical protein SCHCODRAFT_14619 [Schizophyllum commune H4-8]
          Length = 490

 Score = 42.0 bits (97), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 108/273 (39%), Gaps = 60/273 (21%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD---HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V L+GW+  +R    + F  I D     GI  V  N                 L +  L 
Sbjct: 34  VSLNGWIKSIRKQKRVSFAVIYDGSSAKGIQAVFPN----------------TLNVKDLT 77

Query: 78  MSRSAETINANII----TGQI-ELSAQKIEILSVAEELPLPVFGE---REY-PESIRFKY 128
              S   +  N++    +GQ  EL  + +++L    +   P+  +    EY  E++  + 
Sbjct: 78  NGSSVR-LTGNLVPSPGSGQAKELQVKAVDVLGACPQETYPIQKKDLTNEYLRENVHLRA 136

Query: 129 RFLDLR-----RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF--L 181
           R   +      RD LH++I             + +++F+    PILTA+  EGA +   +
Sbjct: 137 RTTAIAAMLRLRDCLHRSI----------HDYLKSQSFVHVHAPILTANDAEGAGETFRI 186

Query: 182 VPSRVNQGSFYALPQAPQQY----------KQLLM---ASGFDRYFQIAPCFRDEDPRSD 228
            P   +  +     Q+P ++           QL M    +   R +   P FR E  ++ 
Sbjct: 187 APVAAHPDAQSTETQSPTEFFGAPAHLTVSSQLHMEAFQAALSRVYTANPAFRAERSQTS 246

Query: 229 RLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGV 260
           R   EF+ ++ E +  E   ++ +  E++LR +
Sbjct: 247 RHLAEFWMVEPEWTLTEGITEVCDVTEDLLRDI 279


>gi|294881737|ref|XP_002769472.1| Lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239872931|gb|EER02190.1| Lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 388

 Score = 42.0 bits (97), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   A + G+PP GG   G+DR+ M L    N++EV L+P
Sbjct: 332 GFVTALEYGLPPTGGWGLGVDRLCMFLTDNINIKEVILYP 371


>gi|296128502|ref|YP_003635752.1| lysyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296020317|gb|ADG73553.1| lysyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 495

 Score = 42.0 bits (97), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 7/152 (4%)

Query: 111 PLP-VFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPI 168
           PLP ++   E  E  R + R++DL      +++V+ R+ ++ S+R       ++E  TP+
Sbjct: 141 PLPNLYEGTEMSEEARVRQRYVDLIVRPGARDMVRLRSAVVRSVRENFWRRGYLELETPM 200

Query: 169 LTASSPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           L    PEGA  R F           Y L  AP+ + +     G ++ F+I   FR+E   
Sbjct: 201 LQVR-PEGAAARQFETHMNAFDIDLY-LRIAPELFLKRAAVGGVEKVFEINRNFRNEGVD 258

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           S   P EF  L+   ++ + D +    +++++
Sbjct: 259 STHSP-EFAMLEAYEAYGDYDTMAALTQDLVQ 289


>gi|260060698|ref|YP_003193778.1| asparaginyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88784828|gb|EAR15997.1| asparaginyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 475

 Score = 42.0 bits (97), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 103/264 (39%), Gaps = 36/264 (13%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           S V +SGWV   R +    F+ + D   +  +    D   F+ A   R          + 
Sbjct: 15  SEVSVSGWVRTFRSNR---FIALNDGSTLENLQCVVDFENFDEATLRR----------IN 61

Query: 79  SRSAETINANIITGQ-----IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           + +A T+   ++  Q     +E+   ++EI   A+    P+  ++   E +R +   L +
Sbjct: 62  TGAALTVRGTLVESQGRGQKVEVQVSQLEIHGDADPESYPIQPKKHSMEFLR-EQAHLRI 120

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVPSR 185
           R +T    +  R+ +   +        F     PI+T S  EGA         D L P R
Sbjct: 121 RTNTFAAVMRVRSALAFGVHEYFTRNGFYYFHAPIITGSDAEGAGEMFRVSTLDPLTPPR 180

Query: 186 VNQGS------FYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
              G+      F+          Q +    A    + +   P FR E+  + R   EF+ 
Sbjct: 181 DESGNVDFGEDFFGKETNLTVSGQLEAEAYAMALGKVYTFGPTFRAENSNTSRHLAEFWM 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGV 260
           ++ EM+F + D  ++  E+ ++ V
Sbjct: 241 IEPEMAFYDLDANMDLAEDFIQEV 264


>gi|330444991|ref|ZP_08308645.1| regulator of pyruvate oxidase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328493109|dbj|GAA03142.1| regulator of pyruvate oxidase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 322

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 4/83 (4%)

Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           + NGF E+A+G  +    E   Q    +G+  + ++     L  A + G P   G+A GI
Sbjct: 242 LANGFHELANGDEQLQRFEQDNQKRIEMGLQPQPIDMN---LVNALRAGFPDCAGVALGI 298

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR++ML +G  ++ +V+ FP+ +
Sbjct: 299 DRLIMLAMGLDHIEKVTAFPIDR 321


>gi|254508180|ref|ZP_05120305.1| lysyl-tRNA synthetase family protein [Vibrio parahaemolyticus 16]
 gi|219548902|gb|EED25902.1| lysyl-tRNA synthetase family protein [Vibrio parahaemolyticus 16]
          Length = 323

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 10/92 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------VGISKEVVENRFGGLYRAFQC 531
           A +++L   G E+A+G       +  L+ F         +G+  + +++    L  A + 
Sbjct: 231 ADRFELYFKGIELANGFHELDNPKEQLKRFEQDNAKRVEMGLEPQPIDH---NLIAALES 287

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+P   G+A G+DR++ML +G  ++ +V+ FP
Sbjct: 288 GLPECAGVALGVDRLIMLAIGCDHIDQVTAFP 319


>gi|283786838|ref|YP_003366703.1| lysyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282950292|emb|CBG89939.1| putative lysyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 325

 Score = 41.6 bits (96), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 26/38 (68%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LGA+++ EV  F
Sbjct: 283 LLEALKVGMPDCSGVALGVDRLVMLALGAESLAEVIAF 320


>gi|238898063|ref|YP_002923744.1| asparagine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229465822|gb|ACQ67596.1| asparagine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 466

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 79/338 (23%), Positives = 123/338 (36%), Gaps = 99/338 (29%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G  D+G  + + GWV R R          RD       VA  D +CF+  +         
Sbjct: 12  GHIDLGHTIIVRGWV-RTR----------RDSKSGISFVALYDGSCFDTLQ--------- 51

Query: 73  IDGLVMSRSAETINANII---TG-QIELSA---------QKIEILSVAEELPLPVFGERE 119
              +V+  S E  + +I+   TG  IE+S          QK EI +      L V G  E
Sbjct: 52  ---IVIEDSLENYHDDILHLTTGCSIEVSGTVVASQGKGQKFEIRANH----LKVIGWVE 104

Query: 120 YPESIRF--KYRFLDLRRDTLH----KNIVKRTRIINSMRCRMIAENFIE-----CSTPI 168
            PE+     K   ++  R+  H     N++     I     + I   F E      +TPI
Sbjct: 105 DPETYPMSPKRHSVEYLREVAHLRPRTNLIGAVTRIRHHLAQAIHRFFHEKGYFWIATPI 164

Query: 169 LTASSPEGARDFLVPSRVNQGS--------------FY---ALPQAPQQYKQLLMASGFD 211
           +T S  EGA +    S ++  +              F+   A      Q      A    
Sbjct: 165 ITTSDTEGAGEMFRVSTLDLANISKTADQKIDFSEDFFGKEAFLTVSGQLNAETYACALS 224

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF---------- 261
           + +   P FR E+  + R   EF+ ++ E++F   +D+    E +L+ VF          
Sbjct: 225 KVYTFGPTFRAENSHTSRHLAEFWMVEPEVAFATLEDVALLAEEMLKYVFSAILKEREDD 284

Query: 262 ----------------EEFSNGNTVSNNFLRICYDDAI 283
                           EEF     +S++F RI Y +AI
Sbjct: 285 LDFFTERVDKKAKKRLEEF-----ISSDFARIDYTEAI 317



 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    + + Q  + +G+++E         YR  +  G  PH G  
Sbjct: 381 DVLAPGIGEIIGGSQREERLDNLDQRLTEMGLNREDY-----AWYRDLRRYGSVPHAGFG 435

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R+V  + G +NVRE   FP +
Sbjct: 436 LGFERLVAYVTGVENVREAIAFPRT 460


>gi|47215828|emb|CAF96791.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3152

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 5/140 (3%)

Query: 124  IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            ++   R + +R + + K +  R+ +    R    +  + E + P L  +  E        
Sbjct: 2537 VQLNNRHMLIRGENVSKILRVRSTVTQCFRDHFFSRGYYEITPPTLVQTQVEDGYTLF-- 2594

Query: 184  SRVNQ-GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             ++N  G    L Q  Q Y +  + +  D  F IA  +R E  R+ R   EF  ++ E  
Sbjct: 2595 -KLNYFGEQVYLTQCSQLYLETCIPALGDT-FCIAQSYRAEQSRTRRHLSEFTHVEAECP 2652

Query: 243  FVEQDDILNTMENVLRGVFE 262
            F+  DD+LN +E+++  V +
Sbjct: 2653 FISFDDLLNGLEDLICDVVD 2672


>gi|167947573|ref|ZP_02534647.1| lysyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 94

 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 27/42 (64%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A Q G+P   G+A GIDR++M + GA+ +R+V  FP  +
Sbjct: 52  LLAALQAGLPDCAGVALGIDRLLMQVSGAEQIRQVLAFPFER 93


>gi|256826236|ref|YP_003150196.1| lysyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256689629|gb|ACV07431.1| lysyl-tRNA synthetase (class II) [Kytococcus sedentarius DSM 20547]
          Length = 520

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           RA + G PP GG+  G+DR+VML  G   +RE  LFP ++
Sbjct: 479 RALEYGAPPMGGMGFGLDRMVMLFTGV-GIRETILFPHTK 517



 Score = 38.1 bits (87), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 11/201 (5%)

Query: 60  EIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           E+ +    EW   ID G ++S +   I +    G++ + A   ++ S A   PLP    +
Sbjct: 116 EVGQEALDEWKSLIDLGDIVSVTGRVICSR--RGELSVMATDWQLASKALR-PLPTL-HK 171

Query: 119 EYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG- 176
           +  E  R + R+ DL  RD   + ++ R+ I +++R  +    ++E  TP+L        
Sbjct: 172 DLSEEQRVRQRYADLIVRDEARRMVLTRSLITSTVRRFLEERGYVEIETPVLQLIHGGAL 231

Query: 177 ARDFLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           AR F    +  NQ     L  A +   +  +  G ++ F+I   FR+E   S   P EF 
Sbjct: 232 ARPFTTHLNAFNQD--MTLRIALELNLKKAVVGGVEKVFEIGRIFRNEGVDSTHSP-EFT 288

Query: 236 QLDMEMSFVEQDDILNTMENV 256
            L+   ++ +Q  +   M+ +
Sbjct: 289 MLEAYEAWGDQTTMAELMQEM 309


>gi|270308173|ref|YP_003330231.1| lysyl-tRNA synthetase, truncated [Dehalococcoides sp. VS]
 gi|270154065|gb|ACZ61903.1| lysyl-tRNA synthetase, truncated [Dehalococcoides sp. VS]
          Length = 309

 Score = 41.6 bits (96), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFY 192
           R   L  N+ +R +I+  +R     + F+E  TP+   S +PE    ++ P     G   
Sbjct: 8   RLKRLKDNLKRRMQILGLIRSFFNEQGFLEVETPVFIPSVAPER---YIKPIECQNGY-- 62

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            L  +P+ Y + ++ +G+   +QI+ CFR E+
Sbjct: 63  -LSTSPELYMKRMLVAGYTTIYQISRCFRAEE 93


>gi|34496073|ref|NP_900288.1| imidazole glycerol phosphate synthase subunit HisF [Chromobacterium
           violaceum ATCC 12472]
 gi|48474797|sp|Q7P0E9|HIS6_CHRVO RecName: Full=Imidazole glycerol phosphate synthase subunit hisF;
           AltName: Full=IGP synthase cyclase subunit; AltName:
           Full=IGP synthase subunit hisF; AltName: Full=ImGP
           synthase subunit hisF; Short=IGPS subunit hisF
 gi|34101927|gb|AAQ58294.1| imidazoleglycerol phosphate synthase [Chromobacterium violaceum
           ATCC 12472]
          Length = 254

 Score = 41.6 bits (96), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 60/148 (40%), Gaps = 18/148 (12%)

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY---GTD 289
           E   LD+  S  ++D IL+ +E V   VF   + G  V     R   D  IRR    G D
Sbjct: 46  ELTFLDITASSDQRDIILHVIEAVADQVFIPLTVGGGV-----RSIAD--IRRLLNAGAD 98

Query: 290 KPDLRNPIIMH-----NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           K  +    + H       +EHF +    V     +V P  + W I    GG NR   D +
Sbjct: 99  KVSINTAAVTHPEFVQQASEHFGNQCIVVALDAKAVTPENDRWEIFTH-GGRNRTGLDAV 157

Query: 345 NEWARSQGQPGLAYIFW-RLDESGNVAG 371
            EWAR   Q G   I    +D  G  AG
Sbjct: 158 -EWARKMQQLGAGEILLTSMDRDGTKAG 184


>gi|117626504|ref|YP_859827.1| lysyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|237703824|ref|ZP_04534305.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|331644905|ref|ZP_08346022.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli H736]
 gi|331655988|ref|ZP_08356976.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli M718]
 gi|331665824|ref|ZP_08366718.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA143]
 gi|331671065|ref|ZP_08371898.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA271]
 gi|331680290|ref|ZP_08380949.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli H591]
 gi|331681177|ref|ZP_08381814.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli H299]
 gi|332280941|ref|ZP_08393354.1| lysyl-tRNA synthetase [Shigella sp. D9]
 gi|25391867|pir||H91270 probable lysyl-tRNA synthetase [imported] - Escherichia coli
           (strain O157:H7, substrain RIMD 0509952)
 gi|25501226|pir||H86111 probable lysyl-tRNA synthetase yjeA [imported] - Escherichia coli
           (strain O157:H7, substrain EDL933)
 gi|12519142|gb|AAG59356.1|AE005649_1 putative lysyl-tRNA synthetase [Escherichia coli O157:H7 str.
           EDL933]
 gi|536999|gb|AAA97054.1| lysyl-tRNA synthetase analog [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13364613|dbj|BAB38559.1| putative lysyl-tRNA synthetase [Escherichia coli O157:H7 str.
           Sakai]
 gi|73858122|gb|AAZ90829.1| putative lysyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|81243576|gb|ABB64286.1| putative lysyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|115515628|gb|ABJ03703.1| lysyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|209750398|gb|ACI73506.1| putative lysyl-tRNA synthetase [Escherichia coli]
 gi|209750400|gb|ACI73507.1| putative lysyl-tRNA synthetase [Escherichia coli]
 gi|209750402|gb|ACI73508.1| putative lysyl-tRNA synthetase [Escherichia coli]
 gi|209750404|gb|ACI73509.1| putative lysyl-tRNA synthetase [Escherichia coli]
 gi|209750406|gb|ACI73510.1| putative lysyl-tRNA synthetase [Escherichia coli]
 gi|226901736|gb|EEH87995.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|331035880|gb|EGI08118.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli H736]
 gi|331046342|gb|EGI18432.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli M718]
 gi|331056875|gb|EGI28869.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA143]
 gi|331061654|gb|EGI33580.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA271]
 gi|331071753|gb|EGI43089.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli H591]
 gi|331081398|gb|EGI52559.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli H299]
 gi|332103293|gb|EGJ06639.1| lysyl-tRNA synthetase [Shigella sp. D9]
          Length = 335

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LGA+ + EV  F
Sbjct: 293 LIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAF 330


>gi|302793741|ref|XP_002978635.1| hypothetical protein SELMODRAFT_418417 [Selaginella moellendorffii]
 gi|300153444|gb|EFJ20082.1| hypothetical protein SELMODRAFT_418417 [Selaginella moellendorffii]
          Length = 531

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 18/172 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE 68
           D G +  G  + + GW+   R H G++FL + D    +  QV+ +P+    +  +     
Sbjct: 20  DGGAALAGQTLCVGGWIKSRRTHRGVVFLALSDGSCASSLQVIVDPEKE-LDTEQLHTGS 78

Query: 69  WVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
            VL    LV+S            GQ +EL A++    + A+    P+   +  PE +R  
Sbjct: 79  CVLVKGELVLSPG---------KGQAVELHAREFLHAAPADASKYPIAKTKLPPEFLR-- 127

Query: 128 YRFLDLR-RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
              L LR R  L  ++ + R+ ++ +       + FI   TPI+T S  EGA
Sbjct: 128 -TVLHLRPRTDLISSVARIRSALVLATHTFFQQQGFIHVHTPIITTSDCEGA 178


>gi|81248010|gb|ABB68718.1| putative lysyl-tRNA synthetase [Shigella boydii Sb227]
          Length = 335

 Score = 41.6 bits (96), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LGA+ + EV  F
Sbjct: 293 LIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAF 330


>gi|315178905|gb|ADT85819.1| lysyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 324

 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 282 LIAALEAGLPACAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|161984787|ref|YP_410546.2| lysyl-tRNA synthetase [Shigella boydii Sb227]
 gi|332087166|gb|EGI92300.1| tRNA synthetases class II family protein [Shigella boydii 3594-74]
          Length = 325

 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LGA+ + EV  F
Sbjct: 283 LIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAF 320


>gi|331650284|ref|ZP_08351356.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli M605]
 gi|26111483|gb|AAN83665.1|AE016771_176 Putative lysyl-tRNA synthetase [Escherichia coli CFT073]
 gi|331040678|gb|EGI12836.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli M605]
          Length = 352

 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LGA+ + EV  F
Sbjct: 310 LIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAF 347


>gi|307197734|gb|EFN78883.1| Probable asparaginyl-tRNA synthetase, mitochondrial [Harpegnathos
           saltator]
          Length = 419

 Score = 41.6 bits (96), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 39/195 (20%)

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY------RFLD 132
           S SAE   +    G+ EL A  + ++     L      E +YP + R  Y      ++L 
Sbjct: 36  SISAEGELSLTPNGKTELYAVNVHVIGKCNVL------EDQYPFAPRKTYDQEYIRKYLH 89

Query: 133 LRRDTLHKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           LR  T +   V R R      I + +R R     FI   TPILT++  EGA +  +    
Sbjct: 90  LRPRTRNFASVLRLRDLATTVIGDHLRNR----GFISIHTPILTSNDCEGAGEVFLVKPQ 145

Query: 187 NQGSFYALPQAPQQYKQLL-----------------MASGFDRYFQIAPCFRDEDPRSDR 229
           ++    ++ +  Q   ++                  MA    + +   P FR E+ +S  
Sbjct: 146 SKEILKSMKKEGQSEDEIYFNTTTYLTVSGQMHLETMARALTKVYTFGPTFRAENSKSRL 205

Query: 230 LPGEFYQLDMEMSFV 244
              EFY L+ E++F+
Sbjct: 206 HLSEFYMLEAEVAFI 220


>gi|331671309|ref|ZP_08372107.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA280]
 gi|331071154|gb|EGI42511.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA280]
          Length = 335

 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LGA+ + EV  F
Sbjct: 293 LIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAF 330


>gi|320334441|ref|YP_004171152.1| Asparaginyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755730|gb|ADV67487.1| Asparaginyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 444

 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 66/303 (21%), Positives = 116/303 (38%), Gaps = 43/303 (14%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVL 71
           + +G  V L  W+      G I FL +RD  G  Q     +      FE AK +  E  +
Sbjct: 9   AHIGQTVTLDAWLTDKSGKGKIQFLKLRDGSGFVQATVFKNDVTEDVFESAKRLTQESSV 68

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRF 130
              G V  R+ E        G +EL+ + +  + V+  E P+     +E+       +R 
Sbjct: 69  RFTGEV--RADER-----APGGVELAVRDLSPVQVSLGEYPI---TPKEHGIEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMI----AENFIECSTPILTASSPEGARDFLVPSRV 186
           L  R    H+      R+ + ++  ++     E FI    P  T ++ EG  +       
Sbjct: 119 LWAR----HRRPWAILRVRDCVQRAVVDFFHGEGFIRFDAPFFTPNAAEGTTELFEIDLF 174

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            +   Y L Q  Q + +   A  F + +   P FR E  ++ R   EF+ ++ E++    
Sbjct: 175 GEDKAY-LSQTGQLHAE-AGALAFGKVYTFGPTFRAEKSKTRRHLLEFWMIEPEVAPSNH 232

Query: 247 DDILNTMEN----VLRGVFEEFSNG------------NTVSNNFLRICYD---DAIRRYG 287
            + +N  E     ++R   EE +                   N+ R+ Y    D IR++ 
Sbjct: 233 TENMNLQERFVSFLVRRALEECTEELQLLGRDLDKLRPAAEGNYPRVTYTQALDIIRQHI 292

Query: 288 TDK 290
            D+
Sbjct: 293 EDR 295


>gi|86131438|ref|ZP_01050036.1| asparagine-tRNA ligase [Dokdonia donghaensis MED134]
 gi|85817883|gb|EAQ39051.1| asparagine-tRNA ligase [Dokdonia donghaensis MED134]
          Length = 480

 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 40/187 (21%), Positives = 77/187 (41%), Gaps = 19/187 (10%)

Query: 93  QIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIIN 150
           ++E+  +++EI   A  EEL   +   + +      +   L +R +T    +  R+++  
Sbjct: 83  RVEIKVKEVEIEGDADPEELKKTILSPKRHTLEKLREQAHLRVRTNTFGAIMRLRSKLSF 142

Query: 151 SMRCRMIAENFIECSTPILTASSPEGARDFLV--------PSRVNQGS------FYALPQ 196
           ++        +    TPI+T S  EGA +           P R   G+      F+    
Sbjct: 143 AIHEYFNKNGYYHAHTPIITGSDAEGAGEMFRVSALDPENPPRKEDGTIDYSKDFFGKET 202

Query: 197 APQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                 QL     A G  + +   P FR E+  + R   EF+ ++ EM+F + D  ++  
Sbjct: 203 NLTVSGQLEGETYALGLGKIYTFGPTFRAENSNTSRHLAEFWMVEPEMAFCDLDGNMDLA 262

Query: 254 ENVLRGV 260
           E+ ++ V
Sbjct: 263 EDFIKYV 269


>gi|323965545|gb|EGB60999.1| tRNA synthetase class II [Escherichia coli M863]
 gi|323975501|gb|EGB70602.1| tRNA synthetase class II [Escherichia coli TW10509]
 gi|327250099|gb|EGE61818.1| tRNA synthetases class II family protein [Escherichia coli STEC_7v]
          Length = 325

 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LGA+ + EV  F
Sbjct: 283 LIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAF 320


>gi|24115514|ref|NP_710024.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30065532|ref|NP_839703.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|38704236|ref|NP_313163.2| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|89110878|ref|AP_004658.1| predicted lysyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           W3110]
 gi|90111694|ref|NP_418579.2| EF-P-lysine34-lysine ligase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|91213707|ref|YP_543693.1| lysyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110644516|ref|YP_672246.1| lysyl-tRNA synthetase [Escherichia coli 536]
 gi|110808079|ref|YP_691599.1| lysyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|157155551|ref|YP_001465657.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
 gi|157163623|ref|YP_001460941.1| lysyl-tRNA synthetase [Escherichia coli HS]
 gi|161367459|ref|NP_290790.2| lysyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|161486016|ref|NP_757091.2| lysyl-tRNA synthetase [Escherichia coli CFT073]
 gi|161949986|ref|YP_405777.2| lysyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|161986385|ref|YP_313064.2| lysyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|168747981|ref|ZP_02773003.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4113]
 gi|168755345|ref|ZP_02780352.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4401]
 gi|168761025|ref|ZP_02786032.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4501]
 gi|168766435|ref|ZP_02791442.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4486]
 gi|168774534|ref|ZP_02799541.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4196]
 gi|168780588|ref|ZP_02805595.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4076]
 gi|168784793|ref|ZP_02809800.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC869]
 gi|168802334|ref|ZP_02827341.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC508]
 gi|170083604|ref|YP_001732924.1| lysyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170684036|ref|YP_001746553.1| lysyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187731526|ref|YP_001882849.1| lysyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|188493357|ref|ZP_03000627.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli 53638]
 gi|191165617|ref|ZP_03027457.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli B7A]
 gi|191173345|ref|ZP_03034874.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli F11]
 gi|193065740|ref|ZP_03046804.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli E22]
 gi|193067922|ref|ZP_03048888.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli E110019]
 gi|194428929|ref|ZP_03061462.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli B171]
 gi|194437213|ref|ZP_03069311.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli 101-1]
 gi|195935949|ref|ZP_03081331.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208805970|ref|ZP_03248307.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4206]
 gi|208812731|ref|ZP_03254060.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4045]
 gi|208821484|ref|ZP_03261804.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4042]
 gi|209395929|ref|YP_002273702.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4115]
 gi|209921648|ref|YP_002295732.1| lysyl-tRNA synthetase [Escherichia coli SE11]
 gi|215489504|ref|YP_002331935.1| lysyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|217325978|ref|ZP_03442062.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           TW14588]
 gi|218556712|ref|YP_002389626.1| lysyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218561317|ref|YP_002394230.1| lysyl-tRNA synthetase [Escherichia coli S88]
 gi|218692494|ref|YP_002400706.1| lysyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218697907|ref|YP_002405574.1| lysyl-tRNA synthetase [Escherichia coli 55989]
 gi|218702857|ref|YP_002410486.1| lysyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218707771|ref|YP_002415290.1| lysyl-tRNA synthetase [Escherichia coli UMN026]
 gi|227886799|ref|ZP_04004604.1| lysine--tRNA ligase [Escherichia coli 83972]
 gi|238903265|ref|YP_002929061.1| putative lysyl-tRNA synthetase [Escherichia coli BW2952]
 gi|253775215|ref|YP_003038046.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254164089|ref|YP_003047197.1| lysyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|254796179|ref|YP_003081016.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|256019803|ref|ZP_05433668.1| lysyl-tRNA synthetase [Shigella sp. D9]
 gi|256025093|ref|ZP_05438958.1| lysyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|260846990|ref|YP_003224768.1| putative lysyl-tRNA synthetase [Escherichia coli O103:H2 str.
           12009]
 gi|260858311|ref|YP_003232202.1| putative lysyl-tRNA synthetase [Escherichia coli O26:H11 str.
           11368]
 gi|260870934|ref|YP_003237336.1| putative lysyl-tRNA synthetase [Escherichia coli O111:H- str.
           11128]
 gi|261225280|ref|ZP_05939561.1| predicted lysyl-tRNA synthetase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255468|ref|ZP_05948001.1| putative lysyl-tRNA synthetase [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291285572|ref|YP_003502390.1| putative lysyl-tRNA synthetase [Escherichia coli O55:H7 str.
           CB9615]
 gi|293402787|ref|ZP_06646884.1| lysyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293407884|ref|ZP_06651724.1| lysyl-tRNA synthetase GenX [Escherichia coli B354]
 gi|293417663|ref|ZP_06660285.1| lysyl-tRNA synthetase GenX [Escherichia coli B185]
 gi|293476470|ref|ZP_06664878.1| lysyl-tRNA synthetase GenX [Escherichia coli B088]
 gi|297518947|ref|ZP_06937333.1| lysyl-tRNA synthetase [Escherichia coli OP50]
 gi|298378317|ref|ZP_06988201.1| lysyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300816542|ref|ZP_07096763.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 107-1]
 gi|300821251|ref|ZP_07101399.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 119-7]
 gi|300899695|ref|ZP_07117922.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 198-1]
 gi|300922435|ref|ZP_07138555.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 182-1]
 gi|300929267|ref|ZP_07144743.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 187-1]
 gi|300940646|ref|ZP_07155207.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 21-1]
 gi|300974952|ref|ZP_07172791.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 45-1]
 gi|300975245|ref|ZP_07172909.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 200-1]
 gi|301023451|ref|ZP_07187232.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 69-1]
 gi|301027978|ref|ZP_07191262.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 196-1]
 gi|301047617|ref|ZP_07194683.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 185-1]
 gi|301325922|ref|ZP_07219343.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 78-1]
 gi|301646602|ref|ZP_07246468.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 146-1]
 gi|306815625|ref|ZP_07449774.1| lysyl-tRNA synthetase [Escherichia coli NC101]
 gi|307140852|ref|ZP_07500208.1| lysyl-tRNA synthetase [Escherichia coli H736]
 gi|309787696|ref|ZP_07682307.1| tRNA synthetase class II family protein [Shigella dysenteriae 1617]
 gi|309796970|ref|ZP_07691370.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 145-7]
 gi|312974035|ref|ZP_07788206.1| tRNA synthetase class II family protein [Escherichia coli 1827-70]
 gi|67473146|sp|P0A8N7|SYK3_ECOLI RecName: Full=Uncharacterized protein YjeA; AltName: Full=GX
 gi|67473147|sp|P0A8N8|SYK3_ECOL6 RecName: Full=Uncharacterized protein YjeA
 gi|67473148|sp|P0A8N9|SYK3_ECO57 RecName: Full=Uncharacterized protein YjeA
 gi|67473149|sp|P0A8P0|SYK3_SHIFL RecName: Full=Uncharacterized protein YjeA
 gi|122421482|sp|Q1R3A2|SYK3_ECOUT RecName: Full=Uncharacterized protein YjeA
 gi|123146416|sp|Q0SXC1|SYK3_SHIF8 RecName: Full=Uncharacterized protein YjeA
 gi|123147396|sp|Q0T9N4|SYK3_ECOL5 RecName: Full=Uncharacterized protein YjeA
 gi|166980061|sp|A7ZV28|SYK3_ECO24 RecName: Full=Uncharacterized protein YjeA
 gi|166980062|sp|A8A7Q4|SYK3_ECOHS RecName: Full=Uncharacterized protein YjeA
 gi|226737082|sp|B7MKW2|SYK3_ECO45 RecName: Full=Uncharacterized protein YjeA
 gi|226737083|sp|B7NTL6|SYK3_ECO7I RecName: Full=Uncharacterized protein YjeA
 gi|226737084|sp|B7M8S0|SYK3_ECO8A RecName: Full=Uncharacterized protein YjeA
 gi|226737085|sp|B7NG94|SYK3_ECOLU RecName: Full=Uncharacterized protein YjeA
 gi|226737086|sp|B1LQH8|SYK3_ECOSM RecName: Full=Uncharacterized protein YjeA
 gi|229470733|sp|B1XDQ9|SYK3_ECODH RecName: Full=Uncharacterized protein YjeA
 gi|238064859|sp|B5Z2G6|SYK3_ECO5E RecName: Full=Uncharacterized protein YjeA
 gi|238064860|sp|B6I264|SYK3_ECOSE RecName: Full=Uncharacterized protein YjeA
 gi|238691725|sp|B2TY33|SYK3_SHIB3 RecName: Full=Uncharacterized protein YjeA
 gi|254782463|sp|B7UPX7|SYK3_ECO27 RecName: Full=Uncharacterized protein YjeA
 gi|254782464|sp|B7LC16|SYK3_ECO55 RecName: Full=Uncharacterized protein YjeA
 gi|254782465|sp|B7MSX2|SYK3_ECO81 RecName: Full=Uncharacterized protein YjeA
 gi|259511521|sp|C5A1E9|SYK3_ECOBW RecName: Full=Uncharacterized protein YjeA
 gi|41552|emb|CAA42604.1| genX [Escherichia coli]
 gi|24054839|gb|AAN45731.1| putative lysyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30043796|gb|AAP19515.1| putative lysyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|85676909|dbj|BAE78159.1| predicted lysyl-tRNA synthetase [Escherichia coli str. K12 substr.
           W3110]
 gi|87082379|gb|AAC77115.2| EF-P-lysine34-lysine ligase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|91075281|gb|ABE10162.1| putative lysyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110346108|gb|ABG72345.1| putative lysyl-tRNA synthetase [Escherichia coli 536]
 gi|110617627|gb|ABF06294.1| putative lysyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|157069303|gb|ABV08558.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli HS]
 gi|157077581|gb|ABV17289.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli E24377A]
 gi|169891439|gb|ACB05146.1| predicted lysyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170521754|gb|ACB19932.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli SMS-3-5]
 gi|187428518|gb|ACD07792.1| lysyl-tRNA synthetase homolog GenX [Shigella boydii CDC 3083-94]
 gi|187769950|gb|EDU33794.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4196]
 gi|188017485|gb|EDU55607.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4113]
 gi|188488556|gb|EDU63659.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli 53638]
 gi|189001774|gb|EDU70760.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4076]
 gi|189357394|gb|EDU75813.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364222|gb|EDU82641.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4486]
 gi|189368582|gb|EDU86998.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374902|gb|EDU93318.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC869]
 gi|189375660|gb|EDU94076.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC508]
 gi|190904312|gb|EDV64021.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli B7A]
 gi|190906321|gb|EDV65931.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli F11]
 gi|192926609|gb|EDV81239.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli E22]
 gi|192958897|gb|EDV89334.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli E110019]
 gi|194412982|gb|EDX29271.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli B171]
 gi|194423769|gb|EDX39758.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli 101-1]
 gi|208725771|gb|EDZ75372.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4206]
 gi|208734008|gb|EDZ82695.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4045]
 gi|208741607|gb|EDZ89289.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4042]
 gi|209157329|gb|ACI34762.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4115]
 gi|209914907|dbj|BAG79981.1| putative lysyl-tRNA synthase [Escherichia coli SE11]
 gi|215267576|emb|CAS12031.1| predicted lysyl-tRNA synthetase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217322199|gb|EEC30623.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           TW14588]
 gi|218354639|emb|CAV01619.1| lysyl-tRNA synthetase [Escherichia coli 55989]
 gi|218363481|emb|CAR01135.1| lysyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218368086|emb|CAR05893.1| lysyl-tRNA synthetase [Escherichia coli S88]
 gi|218372843|emb|CAR20722.1| lysyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218430058|emb|CAR11047.2| lysyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218434868|emb|CAR15806.1| lysyl-tRNA synthetase [Escherichia coli UMN026]
 gi|222035930|emb|CAP78675.1| lysyl-tRNA synthetase [Escherichia coli LF82]
 gi|227836141|gb|EEJ46607.1| lysine--tRNA ligase [Escherichia coli 83972]
 gi|238862640|gb|ACR64638.1| predicted lysyl-tRNA synthetase [Escherichia coli BW2952]
 gi|242379683|emb|CAQ34506.1| predicted regulator of pyruvate oxidase [Escherichia coli
           BL21(DE3)]
 gi|253326259|gb|ACT30861.1| lysyl-tRNA synthetase-related protein GenX [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975990|gb|ACT41661.1| lysyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253980146|gb|ACT45816.1| lysyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|254595579|gb|ACT74940.1| predicted lysyl-tRNA synthetase [Escherichia coli O157:H7 str.
           TW14359]
 gi|257756960|dbj|BAI28462.1| predicted lysyl-tRNA synthetase [Escherichia coli O26:H11 str.
           11368]
 gi|257762137|dbj|BAI33634.1| predicted lysyl-tRNA synthetase [Escherichia coli O103:H2 str.
           12009]
 gi|257767290|dbj|BAI38785.1| predicted lysyl-tRNA synthetase [Escherichia coli O111:H- str.
           11128]
 gi|260451015|gb|ACX41437.1| lysyl-tRNA synthetase-related protein GenX [Escherichia coli DH1]
 gi|281181255|dbj|BAI57585.1| putative lysyl-tRNA synthetase [Escherichia coli SE15]
 gi|281603622|gb|ADA76606.1| putative lysyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|284924341|emb|CBG37457.1| putative lysyl-tRNA synthetase [Escherichia coli 042]
 gi|290765445|gb|ADD59406.1| Putative lysyl-tRNA synthetase [Escherichia coli O55:H7 str.
           CB9615]
 gi|291320923|gb|EFE60365.1| lysyl-tRNA synthetase GenX [Escherichia coli B088]
 gi|291429702|gb|EFF02716.1| lysyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291430381|gb|EFF03379.1| lysyl-tRNA synthetase GenX [Escherichia coli B185]
 gi|291472135|gb|EFF14617.1| lysyl-tRNA synthetase GenX [Escherichia coli B354]
 gi|294490729|gb|ADE89485.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli IHE3034]
 gi|298280651|gb|EFI22152.1| lysyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|299878888|gb|EFI87099.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 196-1]
 gi|300300496|gb|EFJ56881.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 185-1]
 gi|300308744|gb|EFJ63264.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 200-1]
 gi|300356738|gb|EFJ72608.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 198-1]
 gi|300397003|gb|EFJ80541.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 69-1]
 gi|300410440|gb|EFJ93978.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 45-1]
 gi|300421254|gb|EFK04565.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 182-1]
 gi|300454534|gb|EFK18027.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 21-1]
 gi|300462760|gb|EFK26253.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 187-1]
 gi|300526140|gb|EFK47209.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 119-7]
 gi|300530772|gb|EFK51834.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 107-1]
 gi|300847275|gb|EFK75035.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 78-1]
 gi|301075149|gb|EFK89955.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 146-1]
 gi|305851287|gb|EFM51742.1| lysyl-tRNA synthetase [Escherichia coli NC101]
 gi|307556327|gb|ADN49102.1| putative lysyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|307629229|gb|ADN73533.1| lysyl-tRNA synthetase [Escherichia coli UM146]
 gi|308119383|gb|EFO56645.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 145-7]
 gi|308924446|gb|EFP69942.1| tRNA synthetase class II family protein [Shigella dysenteriae 1617]
 gi|309704663|emb|CBJ04013.1| putative lysyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310331569|gb|EFP98825.1| tRNA synthetase class II family protein [Escherichia coli 1827-70]
 gi|312948809|gb|ADR29636.1| lysyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|313646371|gb|EFS10833.1| tRNA synthetase class II family protein [Shigella flexneri 2a str.
           2457T]
 gi|315138712|dbj|BAJ45871.1| putative lysyl-tRNA synthetase [Escherichia coli DH1]
 gi|315288504|gb|EFU47902.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 110-3]
 gi|315294064|gb|EFU53416.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 153-1]
 gi|320187543|gb|EFW62227.1| lysyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320190708|gb|EFW65358.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320193538|gb|EFW68175.1| lysyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|320200710|gb|EFW75296.1| lysyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|320638918|gb|EFX08564.1| poxB regulator PoxA [Escherichia coli O157:H7 str. G5101]
 gi|320644287|gb|EFX13352.1| poxB regulator PoxA [Escherichia coli O157:H- str. 493-89]
 gi|320649605|gb|EFX18129.1| poxB regulator PoxA [Escherichia coli O157:H- str. H 2687]
 gi|320655001|gb|EFX22962.1| poxB regulator PoxA [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320660508|gb|EFX27969.1| poxB regulator PoxA [Escherichia coli O55:H7 str. USDA 5905]
 gi|320665777|gb|EFX32814.1| poxB regulator PoxA [Escherichia coli O157:H7 str. LSU-61]
 gi|323156025|gb|EFZ42187.1| tRNA synthetases class II family protein [Escherichia coli EPECa14]
 gi|323162079|gb|EFZ47950.1| tRNA synthetases class II family protein [Escherichia coli E128010]
 gi|323166767|gb|EFZ52524.1| tRNA synthetases class II family protein [Shigella sonnei 53G]
 gi|323171591|gb|EFZ57237.1| tRNA synthetases class II family protein [Escherichia coli LT-68]
 gi|323176084|gb|EFZ61676.1| tRNA synthetases class II family protein [Escherichia coli 1180]
 gi|323182264|gb|EFZ67674.1| tRNA synthetases class II family protein [Escherichia coli 1357]
 gi|323189961|gb|EFZ75239.1| tRNA synthetases class II family protein [Escherichia coli RN587/1]
 gi|323380449|gb|ADX52717.1| lysyl-tRNA synthetase-related protein GenX [Escherichia coli KO11]
 gi|323935473|gb|EGB31811.1| tRNA synthetase class II [Escherichia coli E1520]
 gi|323946096|gb|EGB42132.1| tRNA synthetase class II [Escherichia coli H120]
 gi|323950773|gb|EGB46651.1| tRNA synthetase class II [Escherichia coli H252]
 gi|323955588|gb|EGB51351.1| tRNA synthetase class II [Escherichia coli H263]
 gi|323960346|gb|EGB55985.1| tRNA synthetase class II [Escherichia coli H489]
 gi|323970585|gb|EGB65844.1| tRNA synthetase class II [Escherichia coli TA007]
 gi|324008600|gb|EGB77819.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 57-2]
 gi|324015048|gb|EGB84267.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 60-1]
 gi|324019337|gb|EGB88556.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 117-3]
 gi|324118725|gb|EGC12617.1| tRNA synthetase class II [Escherichia coli E1167]
 gi|326341790|gb|EGD65573.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|326346635|gb|EGD70369.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|330908501|gb|EGH37020.1| lysyl-tRNA synthetase [Escherichia coli AA86]
 gi|332749032|gb|EGJ79455.1| tRNA synthetases class II family protein [Shigella flexneri K-671]
 gi|332749300|gb|EGJ79721.1| tRNA synthetases class II family protein [Shigella flexneri
           4343-70]
 gi|332761930|gb|EGJ92204.1| tRNA synthetases class II family protein [Shigella flexneri
           2747-71]
 gi|332763203|gb|EGJ93446.1| regulator of pyruvate oxidase [Shigella flexneri 2930-71]
 gi|333009090|gb|EGK28546.1| tRNA synthetases class II family protein [Shigella flexneri K-218]
 gi|333010307|gb|EGK29740.1| tRNA synthetases class II family protein [Shigella flexneri VA-6]
 gi|333011141|gb|EGK30555.1| tRNA synthetases class II family protein [Shigella flexneri K-272]
 gi|333012003|gb|EGK31388.1| tRNA synthetases class II family protein [Shigella flexneri K-304]
 gi|333012665|gb|EGK32045.1| tRNA synthetases class II family protein [Shigella flexneri K-227]
          Length = 325

 Score = 41.6 bits (96), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LGA+ + EV  F
Sbjct: 283 LIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAF 320


>gi|149199813|ref|ZP_01876843.1| lysyl-tRNA synthetase-related protein [Lentisphaera araneosa
           HTCC2155]
 gi|149137101|gb|EDM25524.1| lysyl-tRNA synthetase-related protein [Lentisphaera araneosa
           HTCC2155]
          Length = 292

 Score = 41.6 bits (96), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 12/96 (12%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAF--------SNVGISKEVVENRFGGLYRAFQ 530
           A ++++  +G E+A+       ++   Q F        S   I+ ++ EN      +A +
Sbjct: 201 AERFEVYVDGLELANAYSELTDAQEQRQRFVECQDLRTSQKRITYDLDEN----FLQALE 256

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GMP  GGIA G+DR+ M+L G K++  V  F   Q
Sbjct: 257 KGMPEAGGIALGVDRLAMVLFGHKDISSVLAFGDEQ 292



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 9/165 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           ++ +R+ ++ ++R      +FIE  TPI   +      D++     N G F  L  +P+ 
Sbjct: 6   SLKQRSDLLQALRRFFWQRDFIEVETPIRLLTP--ALEDYIDAIPAN-GKF--LRTSPEL 60

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           + + L+  G ++ FQI  CFR E    +R   EF  L+   +  +   I + ++ + +  
Sbjct: 61  HMKRLLCEGAEKIFQIGACFR-EHEHGERHREEFTMLEWYEAHCDYRKIADDLQALFKFC 119

Query: 261 FEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +E +   +  S  F  +  +DA   Y   K  L   I  +N  E
Sbjct: 120 SKELACREDYFSQTFEVLSLEDAFGSYA--KISLDESIAQNNFEE 162


>gi|331660735|ref|ZP_08361667.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA206]
 gi|315297600|gb|EFU56877.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 16-3]
 gi|331051777|gb|EGI23816.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA206]
          Length = 325

 Score = 41.6 bits (96), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LGA+ + EV  F
Sbjct: 283 LIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAF 320


>gi|304445709|pdb|3A5Z|A Chain A, Crystal Structure Of Escherichia Coli Genx In Complex With
           Elongation Factor P
 gi|304445711|pdb|3A5Z|C Chain C, Crystal Structure Of Escherichia Coli Genx In Complex With
           Elongation Factor P
 gi|304445713|pdb|3A5Z|E Chain E, Crystal Structure Of Escherichia Coli Genx In Complex With
           Elongation Factor P
 gi|304445715|pdb|3A5Z|G Chain G, Crystal Structure Of Escherichia Coli Genx In Complex With
           Elongation Factor P
          Length = 328

 Score = 41.6 bits (96), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LGA+ + EV  F
Sbjct: 286 LIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAF 323


>gi|255326114|ref|ZP_05367201.1| lysine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255296825|gb|EET76155.1| lysine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 527

 Score = 41.6 bits (96), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 12/50 (24%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKN------------VREVSLFPM 564
           RA + G PP GG+  GIDR++MLL G ++            +RE  LFP+
Sbjct: 473 RALEHGAPPMGGLGLGIDRLIMLLAGDQDPERPGTVVRQPGIRETILFPL 522



 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGER 118
           E+ +   SEW   +D   +          I++ + ELS    +    ++ L P+PV   +
Sbjct: 116 EVGEESLSEWKSLVD---LGDHVFVTGRVIVSRRGELSIMVTDWKMASKALRPMPVL-HK 171

Query: 119 EYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEG 176
           +  E  R + R+LDL  R+   + + KR  I  ++R  +    +IE  TP+L        
Sbjct: 172 DLNEETRVRQRYLDLMVREEARELVKKRALITRTVRRVLEDHGYIEVETPVLQLVHGGAT 231

Query: 177 ARDFLVPSRVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           AR F    R +  +F     +  A +   +  +  G +R ++I   FR+E   S   P E
Sbjct: 232 ARPF----RTHLNAFDQPMTMRIATELPLKRAVVGGIERVYEIGRVFRNEGVDSTHSP-E 286

Query: 234 FYQLDMEMSFVEQDDILNTMENVLR 258
           F  L+   ++ +Q  +   M+ +++
Sbjct: 287 FTTLECYETYADQFVMAERMKEIIQ 311


>gi|239618190|ref|YP_002941512.1| tRNA synthetase class II (D K and N) [Kosmotoga olearia TBF 19.5.1]
 gi|239507021|gb|ACR80508.1| tRNA synthetase class II (D K and N) [Kosmotoga olearia TBF 19.5.1]
          Length = 314

 Score = 41.6 bits (96), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 76/167 (45%), Gaps = 16/167 (9%)

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +T    ++ ++ ++  +R  + A+ F+E    IL+  +     +    S    G  YA+ 
Sbjct: 19  ETYRDALLVQSELLKGLRETLDAKGFVEILPVILSPITDPLNHEVFDASVEYYGQNYAVT 78

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDE---DPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           ++   +KQ+ +    ++ + ++P  R E      S R   EF QLDME++   +D+I++ 
Sbjct: 79  KSMILHKQISVLV-HEKIYSVSPNVRLETADKADSGRHLFEFVQLDMEVAGASRDEIMDV 137

Query: 253 MEN----VLRGVFEEF--------SNGNTVSNNFLRICYDDAIRRYG 287
           ME+     +R V  ++              +  F RI   +A+ +YG
Sbjct: 138 MEDAIIYAIRNVLSKYPWVKEKYHPTLKVPAKPFKRITVKEAVEKYG 184


>gi|220929973|ref|YP_002506882.1| asparaginyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|220000301|gb|ACL76902.1| asparaginyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 464

 Score = 41.6 bits (96), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 70/324 (21%), Positives = 116/324 (35%), Gaps = 54/324 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +G  + + GWV  VR      F+++ D   +   QVV       FE  K    + +  + 
Sbjct: 17  IGKTITVPGWVRTVRDSKTFGFIELNDGTFFKNLQVV-------FEDGKLDNFKEITKLS 69

Query: 75  -GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +    E +         EL A++I    + E      +  ++   S  F      L
Sbjct: 70  VGSSIEVEGELVETPNAKQPFELKAKRI----LVESFCPADYQLQKKRHSFEFLRTISHL 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSPEGA--------RDFLVP 183
           R  T   + V R R + +           F+   TP++T S  EGA         D   P
Sbjct: 126 RPRTNTFSAVFRVRSLAAFAIHKFFNERGFVYVHTPLITGSDCEGAGQMFRVTTLDMKNP 185

Query: 184 SRVNQGS------FYALPQAPQQYKQLL---MASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            R  +G       F+    +     QL     A  F   +   P FR E+  + R   EF
Sbjct: 186 PRQKEGDIDYSKDFFEKETSLTVSGQLTGEAYALAFKNIYTFGPTFRAENSNTARHAAEF 245

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSN-------GNTVSNN 273
           + ++ E++F +  D +   E +L+ V              F  F +        N V+++
Sbjct: 246 WMIEPEIAFADLKDDMILAEEMLKYVINYVLENAPEEMQFFNSFVDKGLLERLANVVNSD 305

Query: 274 FLRICYDDAIRRYGTDKPDLRNPI 297
           F  I Y +AI     +K     P+
Sbjct: 306 FAHITYTEAIEILEKNKDKFEYPV 329



 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 15/95 (15%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  EI  G  R    + + +    +G++KE  +      ++GG           H
Sbjct: 379 DLLVPGVGEIIGGSQREERLDTLEKRMDEMGLNKEDYQWYIDLRKYGGT---------KH 429

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G   G +R +M L G  N+R+V  FP +   C+ 
Sbjct: 430 AGFGLGFERAIMYLTGITNIRDVIPFPRTTGSCEF 464


>gi|308483892|ref|XP_003104147.1| CRE-NARS-2 protein [Caenorhabditis remanei]
 gi|308258455|gb|EFP02408.1| CRE-NARS-2 protein [Caenorhabditis remanei]
          Length = 444

 Score = 41.6 bits (96), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 101/254 (39%), Gaps = 63/254 (24%)

Query: 23  LSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           L GW   V+  G  +F+ + +    G+ Q+VAN      +IA+ V+              
Sbjct: 14  LDGWAKSVQKSGKNVFVKVDNGRSRGLIQLVANK-----QIAQEVK-------------- 54

Query: 81  SAETINANIITGQIELS-AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                NA    G  E S   + E   VA++L   + G  E P       R+ DL  D L 
Sbjct: 55  ---VGNAIRAIGSFEKSPGSQQETEFVADQLN--IIGRDENP-------RYEDLSADNLR 102

Query: 140 KNIVKRTR---IINSMRCR----------MIAENFIECSTPILTASSPEGAR---DFLVP 183
           K    R R     + +R R           ++ +FI   TP LT +  EG     D +  
Sbjct: 103 KKTHLRARNSQFASFLRARSALFRETHEFFMSRDFIHIDTPKLTRNDCEGGGEVFDVVTT 162

Query: 184 SR--------VNQGSFYALPQAPQQYKQLL----MASGFDRYFQIAPCFRDEDPRSDRLP 231
           S         + + + Y L  + Q + + +    + +   R + + P FR E  +S    
Sbjct: 163 SAESLNGSEGIKEDAMY-LSVSSQLHLEAMVRYELINRLQRVYTLGPAFRAEKQQSHAHL 221

Query: 232 GEFYQLDMEMSFVE 245
            EFY L++E++FV+
Sbjct: 222 SEFYMLEVEVAFVD 235



 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 12/93 (12%)

Query: 478 KAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           K   +DL+  G  E+A G +R   +E + +     GI +  +E R        + G PP 
Sbjct: 361 KTLSFDLLVPGVGELAGGSVREPDAEKLKE--RGCGI-EWYLETR--------KRGQPPT 409

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G   G +R++  LLG +N+++   FP     C
Sbjct: 410 AGFGIGFERLLQYLLGIQNIKDTLAFPRWHRHC 442


>gi|254491745|ref|ZP_05104924.1| tRNA synthetase class II (D, K and N) subfamily [Methylophaga
           thiooxidans DMS010]
 gi|224463223|gb|EEF79493.1| tRNA synthetase class II (D, K and N) subfamily [Methylophaga
           thiooxydans DMS010]
          Length = 323

 Score = 41.6 bits (96), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR-DFLVPSRVNQGSFYALPQAPQQ 200
           + +R +++  +R      N +E  TP+L+ ++P     D         G  Y L  +P+ 
Sbjct: 15  LKRRAQLLADVRLFFAERNVMEVQTPVLSQAAPTATYLDSFSTDYAPTGQHYYLQTSPEF 74

Query: 201 YKQLLMASGFDRYFQIAPCFRD 222
             + L+A+G    +QIAP FR+
Sbjct: 75  AMKRLLAAGSGDIYQIAPVFRN 96


>gi|323940077|gb|EGB36271.1| tRNA synthetase class II [Escherichia coli E482]
          Length = 303

 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LGA+ + EV  F
Sbjct: 261 LIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAF 298


>gi|319958782|gb|ADV90561.1| lysyl-tRNA synthetase [Entamoeba nuttalli]
          Length = 463

 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A +   PP GG   GIDR+ MLL    N++EV LFP
Sbjct: 216 AIEHAFPPTGGWGLGIDRLAMLLADVDNIKEVILFP 251


>gi|3248957|gb|AAD09938.1| lysyl-tRNA synthetase [Coxiella burnetii]
          Length = 209

 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G+PP  G   GIDR+VML     ++R+V LFP+
Sbjct: 169 ALEYGLPPTAGEGIGIDRLVMLFTDNASIRDVILFPL 205


>gi|315605849|ref|ZP_07880881.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315312547|gb|EFU60632.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 539

 Score = 41.2 bits (95), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 11/95 (11%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE A+         ++    E    A +N      V++  F     A + G 
Sbjct: 448 KWDLYVRGFETATAYSELADPVVQRERFEAQALAAANGDPEAMVMDEDF---LIAMEQGF 504

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PP GG+  GIDR++M+L G + +RE   FP+ +  
Sbjct: 505 PPCGGMGMGIDRLLMVLTG-QGIRETIPFPLVKRL 538


>gi|223999631|ref|XP_002289488.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220974696|gb|EED93025.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 343

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 5/95 (5%)

Query: 476 SIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           S +   +DL+C    E+  G +R    + + +     G+    ++  F  L ++  C   
Sbjct: 251 SGECLSFDLLCPRVGELFGGSMREWRFDKLDEEIKRRGMDVSPIQ-WFLDLRKSGSC--- 306

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           PHGG   G DR+ ML+ G ++VR+V  FP+    C
Sbjct: 307 PHGGWGMGFDRLCMLVCGVQSVRDVVPFPVYYGHC 341


>gi|238757508|ref|ZP_04618693.1| lysyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238704270|gb|EEP96802.1| lysyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 332

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 28/41 (68%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           L  A + G+P   G+A GIDR+VML LGA+ + +V  FP++
Sbjct: 290 LIAALKQGLPDCSGVALGIDRLVMLALGAERLSDVIAFPVN 330


>gi|161505152|ref|YP_001572264.1| lysyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|189082341|sp|A9MFQ6|SYK3_SALAR RecName: Full=Uncharacterized protein YjeA
 gi|160866499|gb|ABX23122.1| hypothetical protein SARI_03289 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 325

 Score = 41.2 bits (95), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+ ++ ++N    L  A + GMP   G+A G+DR+VML LGA+ + +V  F
Sbjct: 273 GLPQQPIDNH---LLDALKAGMPDCSGVALGVDRLVMLALGAERLADVIAF 320


>gi|15642650|ref|NP_232283.1| lysyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587927|ref|ZP_01677682.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 2740-80]
 gi|121727606|ref|ZP_01680714.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae V52]
 gi|147673524|ref|YP_001218145.1| lysyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153819799|ref|ZP_01972466.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae NCTC 8457]
 gi|153821548|ref|ZP_01974215.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae B33]
 gi|227082771|ref|YP_002811322.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae M66-2]
 gi|254851191|ref|ZP_05240541.1| lysyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|298500526|ref|ZP_07010330.1| lysyl-tRNA synthetase GenX [Vibrio cholerae MAK 757]
 gi|9657247|gb|AAF95796.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121547832|gb|EAX57918.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 2740-80]
 gi|121630097|gb|EAX62502.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae V52]
 gi|126509660|gb|EAZ72254.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae NCTC 8457]
 gi|126520933|gb|EAZ78156.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae B33]
 gi|146315407|gb|ABQ19946.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae O395]
 gi|227010659|gb|ACP06871.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae M66-2]
 gi|227014543|gb|ACP10753.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae O395]
 gi|254846896|gb|EET25310.1| lysyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297540695|gb|EFH76752.1| lysyl-tRNA synthetase GenX [Vibrio cholerae MAK 757]
          Length = 349

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 307 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 345


>gi|229524631|ref|ZP_04414036.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae bv. albensis
           VL426]
 gi|229338212|gb|EEO03229.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae bv. albensis
           VL426]
          Length = 324

 Score = 41.2 bits (95), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 282 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|260770862|ref|ZP_05879791.1| lysyl-tRNA synthetase-related protein [Vibrio furnissii CIP 102972]
 gi|260614099|gb|EEX39289.1| lysyl-tRNA synthetase-related protein [Vibrio furnissii CIP 102972]
          Length = 318

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 276 LIAALEAGLPACAGVALGIDRLIMLALGEDHIDKVTAFP 314


>gi|88798860|ref|ZP_01114442.1| lysyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88778340|gb|EAR09533.1| lysyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 316

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 10/96 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-------GISKEVVENRFGGLYRAFQC 531
           A +++L   G E+A+G      ++   + F          G +   ++ RF     A   
Sbjct: 224 ARRFELFWGGMELANGYYELTDAQEQAKRFEQDCQDRLANGQAIPKLDERF---LAALSQ 280

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           GMP   G+A G+DR++M LLG  ++ EV  FP++ N
Sbjct: 281 GMPECSGVALGLDRLIMKLLGKAHIDEVVAFPLAFN 316


>gi|284054711|ref|ZP_06384921.1| lysyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 296

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 25/251 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQ-------VVANPDSACFEIAKSVRSEWVLCI 73
           +R+ G +   R  G I F+ + D     Q       V  +P     +I K      +L I
Sbjct: 60  LRVCGRITFKRDSGSIGFIGLTDASATIQLKIEKKLVTGDPGLTFNQIKK------LLDI 113

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--VFGEREYPESIRFKYRFL 131
              +     E I      G++ +   +++++S A  +P P   +G  + PE  R ++R +
Sbjct: 114 GDFI---GVEGIGCRTNRGELSIQVSRLDVISKAT-IPFPDSYYGIND-PELCR-RHREI 167

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  ++      K R+RII S+R  +    F E  TP+L +       R F+        
Sbjct: 168 DLVSNSTSLQRFKLRSRIIRSIRTYLWNAGFDEIETPVLQSIYGGVATRPFITHHNTLDI 227

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A + + +  +  G ++ F+I   FR+E   S   P EF  +++  ++ +   I
Sbjct: 228 DLY-LRIATELFLKRAVCGGMEKVFEIGRVFRNEGIDSTHNP-EFTSIEVYQAYADYFQI 285

Query: 250 LNTMENVLRGV 260
           +  +E+++  V
Sbjct: 286 MALVEDLICAV 296


>gi|183179669|ref|ZP_02957880.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae MZO-3]
 gi|183013080|gb|EDT88380.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae MZO-3]
          Length = 349

 Score = 41.2 bits (95), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 307 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 345


>gi|255018292|ref|ZP_05290418.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 232

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 11/165 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G + F  I+D +   Q+    D+    I +   + + L   G ++  
Sbjct: 63  VSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDA----IGEDAYAVFKLADLGDIIGI 118

Query: 81  SAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                  N  TG++ + A +  +LS +   LP    G ++  +  R++ R+LDL  +   
Sbjct: 119 KGTIFRTN--TGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQ--RYRQRYLDLITNEES 174

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV 182
           +N  V R++I+   R  M  + F+E  TP+L T +    A+ F+ 
Sbjct: 175 QNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFIT 219


>gi|304445705|pdb|3A5Y|A Chain A, Crystal Structure Of Genx From Escherichia Coli In Complex
           With Lysyladenylate Analog
 gi|304445706|pdb|3A5Y|B Chain B, Crystal Structure Of Genx From Escherichia Coli In Complex
           With Lysyladenylate Analog
 gi|304445707|pdb|3A5Y|C Chain C, Crystal Structure Of Genx From Escherichia Coli In Complex
           With Lysyladenylate Analog
 gi|304445708|pdb|3A5Y|D Chain D, Crystal Structure Of Genx From Escherichia Coli In Complex
           With Lysyladenylate Analog
          Length = 345

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LGA+ + EV  F
Sbjct: 303 LIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAF 340


>gi|262166668|ref|ZP_06034405.1| lysyl-tRNA synthetase-related protein [Vibrio mimicus VM223]
 gi|262026384|gb|EEY45052.1| lysyl-tRNA synthetase-related protein [Vibrio mimicus VM223]
          Length = 324

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 282 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|229507296|ref|ZP_04396801.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae BX 330286]
 gi|229509780|ref|ZP_04399261.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae B33]
 gi|229516905|ref|ZP_04406351.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae RC9]
 gi|229606802|ref|YP_002877450.1| lysyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|255744383|ref|ZP_05418335.1| lysyl-tRNA synthetase-related protein [Vibrio cholera CIRS 101]
 gi|262158507|ref|ZP_06029622.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae INDRE 91/1]
 gi|262170099|ref|ZP_06037788.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae RC27]
 gi|25009412|sp|Q9KNS6|SYK3_VIBCH RecName: Full=Uncharacterized protein YjeA
 gi|229345968|gb|EEO10940.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae RC9]
 gi|229353254|gb|EEO18193.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae B33]
 gi|229354801|gb|EEO19722.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae BX 330286]
 gi|229369457|gb|ACQ59880.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae MJ-1236]
 gi|255737908|gb|EET93301.1| lysyl-tRNA synthetase-related protein [Vibrio cholera CIRS 101]
 gi|262021507|gb|EEY40219.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae RC27]
 gi|262029668|gb|EEY48317.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae INDRE 91/1]
          Length = 324

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 282 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|153829478|ref|ZP_01982145.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 623-39]
 gi|254285847|ref|ZP_04960809.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae AM-19226]
 gi|148875061|gb|EDL73196.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 623-39]
 gi|150424029|gb|EDN15968.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae AM-19226]
          Length = 349

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 307 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 345


>gi|254225395|ref|ZP_04919006.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae V51]
 gi|125622029|gb|EAZ50352.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae V51]
          Length = 349

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 307 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 345


>gi|153213968|ref|ZP_01949161.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 1587]
 gi|124115538|gb|EAY34358.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 1587]
          Length = 349

 Score = 41.2 bits (95), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 307 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 345


>gi|264658074|emb|CBH31241.1| putative aspartyl-tRNA synthetase [Wolbachia endosymbiont of
           Simulium squamosum]
          Length = 93

 Score = 41.2 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)

Query: 338 RAFCDRMNEWARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
           R+F D+  E A+ + G  GL YI    DE+G+  G  P+AK L+      IR   +++ G
Sbjct: 9   RSFFDKKIEHAQKEFGAKGLGYI--TFDENGDAKG--PIAKFLDDNRLNQIREITNIKPG 64

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELG 425
           DS FF +    +  + A      +  ELG
Sbjct: 65  DSVFFASDKENEAATIAGKVHTLLGSELG 93


>gi|262170412|ref|ZP_06038090.1| lysyl-tRNA synthetase-related protein [Vibrio mimicus MB-451]
 gi|261891488|gb|EEY37474.1| lysyl-tRNA synthetase-related protein [Vibrio mimicus MB-451]
          Length = 318

 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 276 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 314


>gi|153825094|ref|ZP_01977761.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae MZO-2]
 gi|149741240|gb|EDM55282.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae MZO-2]
          Length = 349

 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 307 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 345


>gi|323498097|ref|ZP_08103101.1| poxB regulator PoxA [Vibrio sinaloensis DSM 21326]
 gi|323316808|gb|EGA69815.1| poxB regulator PoxA [Vibrio sinaloensis DSM 21326]
          Length = 323

 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 10/92 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------VGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G      +   L+ F         +G+  + +++    L  A + 
Sbjct: 231 ADRFEVYFKGIELANGFHELDDANEQLKRFQQDNSKRIEMGLDPQPIDHH---LIAALES 287

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+P   G+A GIDR++ML +G  ++ +V+ FP
Sbjct: 288 GLPECAGVALGIDRLIMLAIGCDHIDQVTAFP 319


>gi|258575071|ref|XP_002541717.1| lysyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237901983|gb|EEP76384.1| lysyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 502

 Score = 41.2 bits (95), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 100/204 (49%), Gaps = 19/204 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW-----VLCID 74
           ++++G +   R  G  +IF DIR      QV      +  ++    + E      ++ I 
Sbjct: 134 IQIAGRIFTKRSSGAKLIFYDIRAEGVKVQVACQAQESTGDVPFEAQHEHLRRGDIIGII 193

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDL 133
           G     S +T +     G++ + AQ++ +L+    ++P   +G ++  +  R++ R+LDL
Sbjct: 194 GFPGRTSPKTRD----DGELSIFAQQVILLTPCLHQIPSEHYGFKD--QEQRYRQRYLDL 247

Query: 134 RRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV-PSRVNQGS 190
             +   +N+ V R+++I+ +R      +F+E  TP++ A +    A+ F+   + ++   
Sbjct: 248 IMNDKSRNVFVTRSKMISYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHHNELDMNL 307

Query: 191 FYALPQAPQQY-KQLLMASGFDRY 213
           F  +  AP+ Y K L++ SG  ++
Sbjct: 308 FMRI--APELYLKMLIVVSGLVKH 329



 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 25/40 (62%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + + G+PP GG   GIDR+VM L    +++EV  FP  ++
Sbjct: 435 SLEYGLPPTGGWGLGIDRLVMFLTDNYSIKEVLAFPFMKD 474


>gi|229527420|ref|ZP_04416812.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 12129(1)]
 gi|229335052|gb|EEO00537.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 12129(1)]
          Length = 324

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 282 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|297581491|ref|ZP_06943414.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534329|gb|EFH73167.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 349

 Score = 41.2 bits (95), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 307 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 345


>gi|258620473|ref|ZP_05715511.1| Lysyl-tRNA synthetase-related protein [Vibrio mimicus VM573]
 gi|258587352|gb|EEW12063.1| Lysyl-tRNA synthetase-related protein [Vibrio mimicus VM573]
          Length = 324

 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 282 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|239995587|ref|ZP_04716111.1| lysyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 96

 Score = 41.2 bits (95), Expect = 0.54,   Method: Composition-based stats.
 Identities = 18/39 (46%), Positives = 27/39 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   G+PP  G+A GIDR++ML   AK+++EV  F +S+
Sbjct: 57  ALDAGLPPCAGVALGIDRLLMLKTNAKHIQEVINFTVSR 95


>gi|297581493|ref|ZP_06943416.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534331|gb|EFH73169.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 324

 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 282 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|229513575|ref|ZP_04403039.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae TMA 21]
 gi|229349452|gb|EEO14408.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae TMA 21]
 gi|327485129|gb|AEA79536.1| Lysyl-tRNA synthetase-like protein [Vibrio cholerae LMA3894-4]
          Length = 324

 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 282 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|258625686|ref|ZP_05720565.1| Lysyl-tRNA synthetase-related protein [Vibrio mimicus VM603]
 gi|258581924|gb|EEW06794.1| Lysyl-tRNA synthetase-related protein [Vibrio mimicus VM603]
          Length = 324

 Score = 41.2 bits (95), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 282 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|302672135|ref|YP_003832095.1| asparaginyl-tRNA synthetase AsnS [Butyrivibrio proteoclasticus
           B316]
 gi|302396608|gb|ADL35513.1| asparaginyl-tRNA synthetase AsnS [Butyrivibrio proteoclasticus
           B316]
          Length = 461

 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 14/93 (15%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPHGG 538
           LV    E+  G  R    + +++    +G+ KE ++      R+GG           H G
Sbjct: 378 LVPQAGELMGGSQREENLDKLIERMDEMGVDKEGIDWYLDTRRYGGCI---------HSG 428

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
              G +R++M L G +N+R+V  +P +   C+ 
Sbjct: 429 FGMGFERLIMYLTGVENIRDVIPYPRTPKNCEF 461


>gi|262401943|ref|ZP_06078508.1| lysyl-tRNA synthetase-related protein [Vibrio sp. RC586]
 gi|262351915|gb|EEZ01046.1| lysyl-tRNA synthetase-related protein [Vibrio sp. RC586]
          Length = 318

 Score = 41.2 bits (95), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 276 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 314


>gi|229521718|ref|ZP_04411136.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae TM 11079-80]
 gi|229341312|gb|EEO06316.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae TM 11079-80]
          Length = 324

 Score = 41.2 bits (95), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 282 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|221058405|ref|XP_002259848.1| lysine--tRNA ligase [Plasmodium knowlesi strain H]
 gi|193809921|emb|CAQ41115.1| lysine--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 585

 Score = 41.2 bits (95), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG+  GIDRI M L     +++V LFP
Sbjct: 544 SLEYGLPPTGGLGLGIDRITMFLTNKNCIKDVILFP 579



 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 21/215 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            + + ++G + RV   G  + F D+       QV+AN     F      +S +    D +
Sbjct: 132 NTVLNVTGRIMRVSASGQKLRFFDLVGDGAKIQVLAN-----FAFHDHTKSNFAEAYDKI 186

Query: 77  VMSRSAETIN-----ANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFKYRF 130
              R  + +           G++ +  ++  ILS    + LP+ +G ++    IR + R+
Sbjct: 187 ---RRGDIVGIVGFPGKSKKGELSIFPKETIILSPCLHM-LPMKYGLKD--TEIRSRQRY 240

Query: 131 LDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQ 188
           LDL   ++     + RT+IIN +R  +    FIE  TP +   +    A+ F+       
Sbjct: 241 LDLMINESTRSTFITRTKIINYLRNFLNDRGFIEVETPTMNLVAGGANAKPFITHHNDLD 300

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
              Y L  A +   ++L+  G D+ ++I   FR+E
Sbjct: 301 LDLY-LRIATELPLKMLIVGGIDKVYEIGKVFRNE 334


>gi|189067875|dbj|BAG37813.1| unnamed protein product [Homo sapiens]
          Length = 250

 Score = 41.2 bits (95), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGV 260
           M+  F + F   P FR E+ +S R   EFY ++ E+SFV+   D++  +E + R  
Sbjct: 1   MSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVDSLQDLMQVIEELFRAT 56



 Score = 37.7 bits (86), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  GG+R      + +  +  G++ EV +      RFG +         PH
Sbjct: 166 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 215

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG   G +R +  +LG  N+++V  FP   + C L
Sbjct: 216 GGFGMGFERYLQCILGVDNIKDVIPFPRFPHSCLL 250


>gi|260772051|ref|ZP_05880968.1| lysyl-tRNA synthetase-related protein [Vibrio metschnikovii CIP
           69.14]
 gi|260612918|gb|EEX38120.1| lysyl-tRNA synthetase-related protein [Vibrio metschnikovii CIP
           69.14]
          Length = 324

 Score = 41.2 bits (95), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 25/39 (64%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A   G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 282 LLAALTAGLPTCAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|70945745|ref|XP_742659.1| asparagine--t RNA ligase [Plasmodium chabaudi chabaudi]
 gi|56521765|emb|CAH79657.1| asparagine--t RNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 631

 Score = 41.2 bits (95), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 12/83 (14%)

Query: 490 EIASGGIR----NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
           EIA G  R    N + E M +   N+ +    +E R        + G  PH G   GIDR
Sbjct: 554 EIAGGSERETNLNILKEQMKKNKLNIDLYNPYLELR--------KYGNIPHSGFGLGIDR 605

Query: 546 IVMLLLGAKNVREVSLFPMSQNF 568
           ++M +L   N+R++  FP   N+
Sbjct: 606 LIMYILSISNIRDIVPFPRYPNY 628


>gi|209696193|ref|YP_002264123.1| lysyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|208010146|emb|CAQ80471.1| putative lysyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 328

 Score = 41.2 bits (95), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 26/42 (61%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A + G P   G+A GIDR++ML +G K++ +V  FP  +
Sbjct: 286 LIAALEAGFPDCAGVALGIDRLIMLAMGEKHIDQVMAFPFDR 327


>gi|170766763|ref|ZP_02901216.1| lysyl-tRNA synthetase homolog GenX [Escherichia albertii TW07627]
 gi|170124201|gb|EDS93132.1| lysyl-tRNA synthetase homolog GenX [Escherichia albertii TW07627]
          Length = 325

 Score = 41.2 bits (95), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LGA+ + EV  F
Sbjct: 283 LIDALEVGMPDCSGVALGVDRLVMLALGAETLAEVIAF 320


>gi|70914528|ref|XP_731869.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56502186|emb|CAH84569.1| hypothetical protein PC301116.00.0 [Plasmodium chabaudi chabaudi]
          Length = 112

 Score = 41.2 bits (95), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 12/84 (14%)

Query: 490 EIASGGIR----NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
           EIA G  R    N + E M +   N+ +    +E R        + G  PH G   GIDR
Sbjct: 35  EIAGGSERETNLNILKEQMKKNKLNIDLYNPYLELR--------KYGNIPHSGFGLGIDR 86

Query: 546 IVMLLLGAKNVREVSLFPMSQNFC 569
           ++M +L   N+R++  FP   N+ 
Sbjct: 87  LIMYILSISNIRDIVPFPRYPNYL 110


>gi|315617570|gb|EFU98176.1| tRNA synthetase class II family protein [Escherichia coli 3431]
          Length = 325

 Score = 41.2 bits (95), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LGA+ + EV  F
Sbjct: 283 LIDALEVGMPDCSGVALGVDRLVMLALGAETLAEVIAF 320


>gi|311112376|ref|YP_003983598.1| lysine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310943870|gb|ADP40164.1| lysine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 527

 Score = 41.2 bits (95), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 12/50 (24%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKN------------VREVSLFPM 564
           RA + G PP GG+  G+DR++MLL G ++            +RE  LFP+
Sbjct: 473 RALEHGAPPMGGLGLGVDRLIMLLAGEQDPERPGTVVRQPGIRETILFPL 522



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 11/159 (6%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPIL 169
           P+PV   ++  E  R + R+LDL      +++VK+  +I     R++ ++ +IE  TP+L
Sbjct: 165 PMPVL-HKDLNEETRVRRRYLDLMVRPEARDLVKKRALITRTVRRVLEDHGYIELETPVL 223

Query: 170 T-ASSPEGARDFLVPSRVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
                   AR F    R +  +F     +  A +   +  +  G +R ++I   FR+E  
Sbjct: 224 QLVHGGATARPF----RTHLNAFDQPMTMRIATELPLKRAVVGGIERVYEIGRVFRNEGV 279

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
            S   P EF  L+   ++ +Q  +   M+ ++    +E 
Sbjct: 280 DSTHSP-EFTTLECYEAYADQYVMAERMQEIIVACAQEL 317


>gi|77166083|ref|YP_344608.1| lysyl-tRNA synthetase-related protein [Nitrosococcus oceani ATCC
           19707]
 gi|76884397|gb|ABA59078.1| Lysyl-tRNA synthetase-related protein [Nitrosococcus oceani ATCC
           19707]
          Length = 356

 Score = 41.2 bits (95), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 3/53 (5%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G+S EV  ++F  L  A + G+P   G+A G+DR++MLLL +  + EV  FP+
Sbjct: 304 GLS-EVPMDKF--LLAALEQGLPACAGVALGVDRLLMLLLNSARIEEVLAFPL 353


>gi|238793397|ref|ZP_04637023.1| lysyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238727366|gb|EEQ18894.1| lysyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 340

 Score = 40.8 bits (94), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN---VGISKEVVENRFG-GLYRAFQCGMP 534
           A ++++   G E+A+G       +  LQ F     +   + + +N     L  A + G+P
Sbjct: 248 AERFEVYFKGIELANGFHELTDGDEQLQRFEQDNRIRAKRGLPQNPIDMNLIAALKQGLP 307

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              G+A G+DR+VML LGA+ + +V  FP+ +
Sbjct: 308 DCSGVALGVDRLVMLALGAERLDDVIAFPVGR 339


>gi|269796472|ref|YP_003315927.1| lysyl-tRNA synthetase (class II) [Sanguibacter keddieii DSM 10542]
 gi|269098657|gb|ACZ23093.1| lysyl-tRNA synthetase (class II) [Sanguibacter keddieii DSM 10542]
          Length = 510

 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPH 536
           ++DL   GFE+A+         V  Q F    +     ++    L      A +  MPP 
Sbjct: 419 KWDLYVRGFELATAYSELVDPVVQRQRFEAQAVLAAAGDDEAMVLDEDFLTAMEYAMPPS 478

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GG+  G+DR++M L G   +RE  LFP+
Sbjct: 479 GGMGMGLDRLLMALTGL-GIRETILFPL 505



 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 5/150 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLPV   RE  E  R + R++DL  R    +    R  ++ S+R       ++E  TP+L
Sbjct: 158 PLPVL-HRELSEEARVRQRYVDLIARPAAREAARLRAGVVRSLRENFHDRGYMEIETPML 216

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T      AR F           + L  AP+ + +  +  G +R F+I   FR+E   S 
Sbjct: 217 QTIHGGAAARPFTTHMNAFDIDLF-LRIAPELFLKRAVVGGIERVFEINRNFRNEGADST 275

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             P EF  L+   ++ + + +    +N+++
Sbjct: 276 HSP-EFAMLEAYEAYGDYNSMAVLTKNLVQ 304


>gi|254435727|ref|ZP_05049234.1| lysyl-tRNA synthetase family protein [Nitrosococcus oceani AFC27]
 gi|207088838|gb|EDZ66110.1| lysyl-tRNA synthetase family protein [Nitrosococcus oceani AFC27]
          Length = 332

 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 3/53 (5%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G+S EV  ++F  L  A + G+P   G+A G+DR++MLLL +  + EV  FP+
Sbjct: 280 GLS-EVPMDKF--LLAALEQGLPACAGVALGVDRLLMLLLNSARIEEVLAFPL 329


>gi|56758450|gb|AAW27365.1| SJCHGC03318 protein [Schistosoma japonicum]
          Length = 185

 Score = 40.8 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 17/36 (47%), Positives = 21/36 (58%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   G+PP  G   GIDR+ M L    N++EV LFP
Sbjct: 47  ALGYGLPPTAGWGLGIDRLTMFLTNTNNIKEVILFP 82


>gi|300742480|ref|ZP_07072501.1| lysine--tRNA ligase [Rothia dentocariosa M567]
 gi|300381665|gb|EFJ78227.1| lysine--tRNA ligase [Rothia dentocariosa M567]
          Length = 510

 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 12/50 (24%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKN------------VREVSLFPM 564
           RA + G PP GG+  G+DR++MLL G ++            +RE  LFP+
Sbjct: 456 RALEHGAPPMGGLGLGVDRLIMLLAGEQDPEHPGTVVRQPGIRETILFPL 505



 Score = 40.4 bits (93), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 11/159 (6%)

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPIL 169
           P+PV   ++  E  R + R+LDL      +++VK+  +I     R++ ++ +IE  TP+L
Sbjct: 148 PMPVL-HKDLNEETRVRRRYLDLMVRPEARDLVKKRALITRTVRRVLEDHGYIELETPVL 206

Query: 170 T-ASSPEGARDFLVPSRVNQGSF---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
                   AR F    R +  +F     +  A +   +  +  G +R ++I   FR+E  
Sbjct: 207 QLVHGGATARPF----RTHLNAFDQPMTMRIATELPLKRAVVGGIERVYEIGRVFRNEGV 262

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
            S   P EF  L+   ++ +Q  +   M+ ++    +E 
Sbjct: 263 DSTHSP-EFTTLECYEAYADQYVMAERMQEIIVACAQEL 300


>gi|50841670|ref|YP_054897.1| lysyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289424611|ref|ZP_06426394.1| lysine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289428873|ref|ZP_06430553.1| lysine--tRNA ligase [Propionibacterium acnes J165]
 gi|295129747|ref|YP_003580410.1| lysine--tRNA ligase [Propionibacterium acnes SK137]
 gi|50839272|gb|AAT81939.1| lysyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289155308|gb|EFD03990.1| lysine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289157874|gb|EFD06097.1| lysine--tRNA ligase [Propionibacterium acnes J165]
 gi|291375112|gb|ADD98966.1| lysine--tRNA ligase [Propionibacterium acnes SK137]
 gi|332674584|gb|AEE71400.1| lysine--tRNA ligase [Propionibacterium acnes 266]
          Length = 510

 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 15/92 (16%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG---------LYRAFQCG 532
           +DL+  G E  +G      SE++        ++K+ +    G             A + G
Sbjct: 420 WDLIIGGMERGTG-----FSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFLEALEFG 474

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            PP GG+  G+DR+VML   A  +RE  LFP+
Sbjct: 475 CPPMGGLGLGVDRLVMLFTNA-GIRETILFPL 505


>gi|284034397|ref|YP_003384328.1| lysyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283813690|gb|ADB35529.1| lysyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 1117

 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 123/310 (39%), Gaps = 30/310 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-G 75
            G  V ++G V R+R HG + F  ++D     QV+    +   E  ++    W   +D G
Sbjct: 676 TGHHVSVTGRVMRLRDHGNLAFAQLQDGLDQLQVMLAAGTCPAEDLRN----WDRFVDIG 731

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLR 134
             +S + E + +     + ELS         A+ L PLP   +       R + R LDL 
Sbjct: 732 DHVSVTGEVVTSR----RGELSVAVTGWTMAAKCLHPLPDKRKGFTDPEARVRQRHLDLV 787

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +     +++ R+  + ++R    A  F+E  TP+L A      AR F+          +
Sbjct: 788 TNPDALRMLRHRSTAVRALRHGFEARGFVEVETPMLQAVHGGANARPFVTHINAYDTDLF 847

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE------- 245
            L  AP+ + + L   G  + F++   FR+E   +   P EF  ++    + +       
Sbjct: 848 -LRIAPELFLKRLGVGGLGKVFELNRNFRNEGADATHNP-EFTSVEAYQPYADYHVMREL 905

Query: 246 -QDDILNTMENVL-RGVFEEFSNGNTVSNNFLRICYDDAIRRY-------GTDKPDLRNP 296
            ++ +L T   V  + V +       +S ++  +   DA+ R        GT    LR  
Sbjct: 906 TRELLLETAVAVFGKAVVQRDGAELDISGDWPVVTVHDAVSRAAGVTIDPGTPVSRLREI 965

Query: 297 IIMHNVTEHF 306
              H V   F
Sbjct: 966 CAQHGVRAGF 975



 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 479  AFQYDLVCNGFEIASG--------GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            A ++DLV  G EI +           R  ++E  L+A +    +  + E+       A +
Sbjct: 1022 AERWDLVAFGAEIGTAYSELVDPVEQRRRLTEQSLKAAAGDPEAMSLDED----FLAALE 1077

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              +PP GG+  G+DRI+M+L G +N+R    FP
Sbjct: 1078 YALPPTGGLGLGVDRILMMLTG-QNIRATLAFP 1109


>gi|327396213|dbj|BAK13635.1| putative lysyl-tRNA synthetase PoxA [Pantoea ananatis AJ13355]
          Length = 325

 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 28/42 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A + GMP   G+A G+DR++ML L A+++ EV  FP+ +
Sbjct: 283 LLAALEHGMPACSGVALGVDRLIMLALKAESLSEVIAFPVDR 324


>gi|261415457|ref|YP_003249140.1| tRNA synthetase class II (D K and N) [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261371913|gb|ACX74658.1| tRNA synthetase class II (D K and N) [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302325424|gb|ADL24625.1| tRNA synthetase, class II (D, K and N) [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 323

 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMP   G+A G+DR+ ML LG + + +V LFP
Sbjct: 284 ALESGMPACSGVALGLDRLFMLALGKEEIADVILFP 319


>gi|66356638|ref|XP_625497.1| asparaginyl-tRNA synthetase (NOB+tRNA synthase) [Cryptosporidium
           parvum Iowa II]
 gi|46226491|gb|EAK87485.1| asparaginyl-tRNA synthetase (NOB+tRNA synthase) [Cryptosporidium
           parvum Iowa II]
 gi|323509245|dbj|BAJ77515.1| cgd8_350 [Cryptosporidium parvum]
          Length = 499

 Score = 40.8 bits (94), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 24/40 (60%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G  PH G   G +R++M++ G +NVR+V  FP   N C+ 
Sbjct: 460 GSVPHSGFGLGFERLIMMVTGVENVRDVIPFPRYPNHCEF 499


>gi|302805645|ref|XP_002984573.1| hypothetical protein SELMODRAFT_423731 [Selaginella moellendorffii]
 gi|300147555|gb|EFJ14218.1| hypothetical protein SELMODRAFT_423731 [Selaginella moellendorffii]
          Length = 531

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 20/173 (11%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE 68
           D G +  G  + + GW+   R H G++FL + D    +  QV+ +P+       + + + 
Sbjct: 20  DGGAALAGQTLCVGGWIKSRRTHRGVVFLALSDGSCASSLQVIVDPEKEL--DTEQLHTG 77

Query: 69  WVLCIDG-LVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
             L + G LV+S            GQ +EL A++    + A+    P+   +  PE +R 
Sbjct: 78  SCLLVKGELVLSPG---------KGQAVELHAREFLHAAPADASKYPIAKTKLPPEFLR- 127

Query: 127 KYRFLDLR-RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               L LR R  L  ++ + R+ ++ +       + FI   TPI+T S  EGA
Sbjct: 128 --TVLHLRPRTDLISSVARIRSALVLATHTFFQQQGFIHVHTPIITTSDCEGA 178


>gi|254037171|ref|ZP_04871248.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|226840277|gb|EEH72279.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
          Length = 335

 Score = 40.8 bits (94), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LGA+ + EV  F
Sbjct: 293 LIDALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAF 330


>gi|37498984|gb|AAQ91582.1| aspartyl-tRNA synthetase [Helicobacter mustelae]
          Length = 29

 Score = 40.8 bits (94), Expect = 0.65,   Method: Composition-based stats.
 Identities = 15/29 (51%), Positives = 21/29 (72%)

Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYG 46
          G  VRL+GW +  R HGG++F+D+RD  G
Sbjct: 1  GEEVRLAGWCNTYRDHGGVVFIDLRDKSG 29


>gi|313828964|gb|EFS66678.1| lysyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|315109927|gb|EFT81903.1| lysyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
          Length = 494

 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 15/92 (16%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG---------LYRAFQCG 532
           +DL+  G E  +G      SE++        ++K+ +    G             A + G
Sbjct: 404 WDLIIGGMERGTG-----FSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFLEALEFG 458

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            PP GG+  G+DR+VML   A  +RE  LFP+
Sbjct: 459 CPPMGGLGLGVDRLVMLFTNA-GIRETILFPL 489


>gi|313814026|gb|EFS51740.1| lysyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
          Length = 494

 Score = 40.8 bits (94), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 15/92 (16%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG---------LYRAFQCG 532
           +DL+  G E  +G      SE++        ++K+ +    G             A + G
Sbjct: 404 WDLIIGGMERGTG-----FSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFLEALEFG 458

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            PP GG+  G+DR+VML   A  +RE  LFP+
Sbjct: 459 CPPMGGLGLGVDRLVMLFTNA-GIRETILFPL 489


>gi|255656227|ref|ZP_05401636.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-23m63]
          Length = 171

 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 78/193 (40%), Gaps = 41/193 (21%)

Query: 380 NIVNTEAIR------VRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQELGIINCNCF 432
            IVN+E +R      V L ++ G    +    P+++ C    +   +I ++  I NC  F
Sbjct: 7   KIVNSEFVRITYTKAVELLIESGHDFEY----PVEWGCDLQTEHERYITEQ--IYNCPVF 60

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
               + D+P           D       M + G ++++  DLL         V    EI 
Sbjct: 61  ----VTDYP----------KDIKAFYMRMNEDG-KTVRAMDLL---------VPGVGEIV 96

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+L   + +G+ +E     +       + G   H G   G +RI+M + G
Sbjct: 97  GGSQREEREDVLLDRINEMGLREE----DYWWYLELRKFGTATHSGFGLGFERIIMYMTG 152

Query: 553 AKNVREVSLFPMS 565
             N+R+V  FP +
Sbjct: 153 MSNIRDVIPFPRT 165


>gi|170021832|ref|YP_001726786.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|194434730|ref|ZP_03066982.1| lysyl-tRNA synthetase homolog GenX [Shigella dysenteriae 1012]
 gi|300905988|ref|ZP_07123712.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 84-1]
 gi|300920820|ref|ZP_07137220.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 115-1]
 gi|300949115|ref|ZP_07163158.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 116-1]
 gi|300957815|ref|ZP_07169994.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 175-1]
 gi|301302575|ref|ZP_07208705.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 124-1]
 gi|307312006|ref|ZP_07591643.1| lysyl-tRNA synthetase-related protein GenX [Escherichia coli W]
 gi|312965833|ref|ZP_07780059.1| tRNA synthetase class II family protein [Escherichia coli 2362-75]
 gi|189082339|sp|B1ITP1|SYK3_ECOLC RecName: Full=Uncharacterized protein YjeA
 gi|169756760|gb|ACA79459.1| lysyl-tRNA synthetase-related protein GenX [Escherichia coli ATCC
           8739]
 gi|194417011|gb|EDX33128.1| lysyl-tRNA synthetase homolog GenX [Shigella dysenteriae 1012]
 gi|300315475|gb|EFJ65259.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 175-1]
 gi|300402155|gb|EFJ85693.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 84-1]
 gi|300412212|gb|EFJ95522.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 115-1]
 gi|300451425|gb|EFK15045.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 116-1]
 gi|300842100|gb|EFK69860.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 124-1]
 gi|306907813|gb|EFN38314.1| lysyl-tRNA synthetase-related protein GenX [Escherichia coli W]
 gi|312289076|gb|EFR16970.1| tRNA synthetase class II family protein [Escherichia coli 2362-75]
 gi|315063474|gb|ADT77801.1| predicted lysyl-tRNA synthetase [Escherichia coli W]
 gi|315255502|gb|EFU35470.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 85-1]
 gi|320180673|gb|EFW55600.1| lysyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|332083157|gb|EGI88388.1| tRNA synthetases class II family protein [Shigella boydii 5216-82]
 gi|332083621|gb|EGI88839.1| tRNA synthetases class II family protein [Shigella dysenteriae
           155-74]
 gi|332346236|gb|AEE59570.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 325

 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LGA+ + EV  F
Sbjct: 283 LIDALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAF 320


>gi|67611498|ref|XP_667160.1| asparaginyl-tRNA synthetase [Cryptosporidium hominis TU502]
 gi|54658269|gb|EAL36932.1| asparaginyl-tRNA synthetase [Cryptosporidium hominis]
          Length = 499

 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 24/40 (60%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G  PH G   G +R++M++ G +NVR+V  FP   N C+ 
Sbjct: 460 GSVPHSGFGLGFERLIMMVTGVENVRDVIPFPRYPNHCEF 499


>gi|251788031|ref|YP_003002752.1| lysyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247536652|gb|ACT05273.1| lysyl-tRNA synthetase-related protein GenX [Dickeya zeae Ech1591]
          Length = 325

 Score = 40.8 bits (94), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A   G+PP  G+A G+DR+VML L A+++ EV  F
Sbjct: 283 LLAALAAGIPPCSGVAVGVDRLVMLALNAESIGEVMAF 320



 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR-----VNQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R     V  G    L 
Sbjct: 15  NLLKRASIMKEIRRFFSDRGVLEVETPAMSQATVTDVHLFPFQTRFVGPGVADGMALYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +   ++N M++
Sbjct: 75  TSPEYHMKRLLAAGSGPIYQLCRSFRNEESGRYHNP-EFTMLEWYRPHYDMYRLMNEMDD 133

Query: 256 VLRGVFE 262
           +L+ V E
Sbjct: 134 LLQQVLE 140


>gi|149173839|ref|ZP_01852468.1| lysyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148847369|gb|EDL61703.1| lysyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 347

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 27/42 (64%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L +A + G+P   G A G+DR+ ML LG + ++EV  FP+ +
Sbjct: 305 LLQAMEAGLPACAGTALGLDRLFMLALGKQTLQEVIAFPVER 346



 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 74/170 (43%), Gaps = 30/170 (17%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------------- 186
           + + +R++++ ++R    +  + E  TP+L+       RD +V + +             
Sbjct: 15  ETLQQRSQLLRAIRTFFESRGYWEVETPLLS-------RDTVVDAYIDPFLTHWHAAEGT 67

Query: 187 --NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             N G    L  +P+   + L+A+G D+ +QI   FR  + R +R   EF  L+      
Sbjct: 68  TDNPGEPRYLQTSPEFAMKRLLAAGADQIYQITHAFRQAE-RGERHNPEFAMLEWYRRGE 126

Query: 245 EQDDILNTMENVLRGVFEE---FSNGNTVS----NNFLRICYDDAIRRYG 287
              D +  +E ++R V+ E    ++ N  S      F R  Y+DA  ++ 
Sbjct: 127 THHDQMTFVEALVRDVYAEAATVTDSNRHSELPDQPFTRYAYEDAFLQFA 176


>gi|300715029|ref|YP_003739832.1| lysyl-tRNA synthetase (Lysine-tRNA ligase) [Erwinia billingiae
           Eb661]
 gi|299060865|emb|CAX57972.1| lysyl-tRNA synthetase (Lysine-tRNA ligase) [Erwinia billingiae
           Eb661]
          Length = 325

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------VGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G      S    Q F          G+ ++ ++     L  A   
Sbjct: 233 AERFEVYFKGIELANGFRELTDSREQKQRFDQDNRKRAASGLPQQPIDT---NLLDALAH 289

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           GMP   G+A G+DRIVML L A ++ EV  FP+ +
Sbjct: 290 GMPDCSGVALGVDRIVMLALKADSLSEVIAFPVDR 324


>gi|291615961|ref|YP_003518703.1| PoxA [Pantoea ananatis LMG 20103]
 gi|291150991|gb|ADD75575.1| PoxA [Pantoea ananatis LMG 20103]
          Length = 349

 Score = 40.8 bits (94), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 28/42 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A + GMP   G+A G+DR++ML L A+++ EV  FP+ +
Sbjct: 307 LLAALEHGMPACSGVALGVDRLIMLALKAESLSEVIAFPVDR 348


>gi|313764813|gb|EFS36177.1| lysyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313772713|gb|EFS38679.1| lysyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313803367|gb|EFS44549.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313807056|gb|EFS45554.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313811194|gb|EFS48908.1| lysyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313815623|gb|EFS53337.1| lysyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|313817841|gb|EFS55555.1| lysyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313821333|gb|EFS59047.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313824726|gb|EFS62440.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313826390|gb|EFS64104.1| lysyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|313832195|gb|EFS69909.1| lysyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834312|gb|EFS72026.1| lysyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|313839468|gb|EFS77182.1| lysyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314916420|gb|EFS80251.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314921636|gb|EFS85467.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314926368|gb|EFS90199.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314930718|gb|EFS94549.1| lysyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314955165|gb|EFS99570.1| lysyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314959359|gb|EFT03461.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314961533|gb|EFT05634.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314964076|gb|EFT08176.1| lysyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314969185|gb|EFT13283.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|314974409|gb|EFT18504.1| lysyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976959|gb|EFT21054.1| lysyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314980053|gb|EFT24147.1| lysyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314985404|gb|EFT29496.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|314986908|gb|EFT31000.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314990599|gb|EFT34690.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315081802|gb|EFT53778.1| lysyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315086497|gb|EFT58473.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315088210|gb|EFT60186.1| lysyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315097241|gb|EFT69217.1| lysyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|315099567|gb|EFT71543.1| lysyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315102202|gb|EFT74178.1| lysyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315107524|gb|EFT79500.1| lysyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|327331244|gb|EGE72983.1| lysine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327333873|gb|EGE75590.1| lysine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327444660|gb|EGE91314.1| lysyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|327447380|gb|EGE94034.1| lysyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|327450434|gb|EGE97088.1| lysyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327454452|gb|EGF01107.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327456519|gb|EGF03174.1| lysyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328756216|gb|EGF69832.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328758164|gb|EGF71780.1| lysyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328758595|gb|EGF72211.1| lysyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
 gi|328759561|gb|EGF73167.1| lysine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 494

 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 15/92 (16%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG---------LYRAFQCG 532
           +DL+  G E  +G      SE++        ++K+ +    G             A + G
Sbjct: 404 WDLIIGGMERGTG-----FSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFLEALEFG 458

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            PP GG+  G+DR+VML   A  +RE  LFP+
Sbjct: 459 CPPMGGLGLGVDRLVMLFTNA-GIRETILFPL 489


>gi|156096490|ref|XP_001614279.1| lysine-tRNA ligase [Plasmodium vivax SaI-1]
 gi|148803153|gb|EDL44552.1| lysine-tRNA ligase, putative [Plasmodium vivax]
          Length = 585

 Score = 40.8 bits (94), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG+  GIDRI M L     +++V LFP
Sbjct: 544 SLEYGLPPTGGLGLGIDRIAMFLTNKNCIKDVILFP 579



 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 26/221 (11%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           D  ++  G  +R+S    ++R      F D+       QV+AN     F      +S + 
Sbjct: 132 DTPLNVTGRIMRVSASGQKLR------FFDLVGDGAKIQVLAN-----FAFHDHTKSNFA 180

Query: 71  LCIDGLVMSRSAETIN-----ANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESI 124
              D +   R  + +           G++ +  ++  ILS    + LP+ +G ++    I
Sbjct: 181 ESYDKI---RRGDIVGIVGFPGKSKKGELSIFPKETIILSPCLHM-LPMKYGLKD--TEI 234

Query: 125 RFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLV 182
           R + R+LDL   +      + RT+IIN +R  +  + FIE  TP +   +    AR F+ 
Sbjct: 235 RCRQRYLDLMINENTRSTFITRTKIINYLRNFLNDKGFIEVETPTMNLVAGGASARPFIT 294

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
                    + L  A +   ++L+  G D+ ++I   FR+E
Sbjct: 295 HHNDLDLDLF-LRIATELPLKMLIVGGIDKVYEIGKVFRNE 334


>gi|327334755|gb|EGE76466.1| lysine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 494

 Score = 40.8 bits (94), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 15/92 (16%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG---------LYRAFQCG 532
           +DL+  G E  +G      SE++        ++K+ +    G             A + G
Sbjct: 404 WDLIIGGMERGTG-----FSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFLEALEFG 458

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            PP GG+  G+DR+VML   A  +RE  LFP+
Sbjct: 459 CPPMGGLGLGVDRLVMLFTNA-GIRETILFPL 489


>gi|156972498|ref|YP_001443405.1| lysyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166229787|sp|A7MX66|SYK3_VIBHB RecName: Full=Uncharacterized protein YjeA
 gi|156524092|gb|ABU69178.1| hypothetical protein VIBHAR_00130 [Vibrio harveyi ATCC BAA-1116]
          Length = 323

 Score = 40.8 bits (94), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 3/54 (5%)

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           ++G+  + ++    G   A + G+P   G+A G+DR++ML LG  ++ +V+ FP
Sbjct: 269 DMGLKPQPIDYHLIG---ALEAGLPDCAGVALGVDRLIMLALGCDHIDQVTAFP 319


>gi|330862354|emb|CBX72513.1| hypothetical protein YEW_HJ32730 [Yersinia enterocolitica W22703]
          Length = 102

 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 28/42 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A + G+P   G+A G+DR+VML LGA+ + +V  FP+ +
Sbjct: 60  LIDALKHGLPDCSGVALGVDRLVMLALGAEKLSDVIAFPVGR 101


>gi|302816978|ref|XP_002990166.1| hypothetical protein SELMODRAFT_272117 [Selaginella moellendorffii]
 gi|300142021|gb|EFJ08726.1| hypothetical protein SELMODRAFT_272117 [Selaginella moellendorffii]
          Length = 536

 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + G+PP  G   GIDR+VMLL  + N++EV L P
Sbjct: 481 KAMEYGLPPCAGWGMGIDRLVMLLTDSLNIKEVLLCP 517


>gi|302821721|ref|XP_002992522.1| hypothetical protein SELMODRAFT_186810 [Selaginella moellendorffii]
 gi|302821723|ref|XP_002992523.1| hypothetical protein SELMODRAFT_186810 [Selaginella moellendorffii]
 gi|300139724|gb|EFJ06460.1| hypothetical protein SELMODRAFT_186810 [Selaginella moellendorffii]
 gi|300139725|gb|EFJ06461.1| hypothetical protein SELMODRAFT_186810 [Selaginella moellendorffii]
          Length = 536

 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 25/37 (67%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + G+PP  G   GIDR+VMLL  + N++EV L P
Sbjct: 481 KAMEYGLPPCAGWGMGIDRLVMLLTDSLNIKEVLLCP 517


>gi|238787527|ref|ZP_04631325.1| lysyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238724314|gb|EEQ15956.1| lysyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 325

 Score = 40.8 bits (94), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 27/40 (67%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           L  A + G+P   G+A G+DR+VML LGA+ + +V  FP+
Sbjct: 283 LIAALKHGLPDCSGVALGVDRLVMLALGAEKLSDVIAFPV 322


>gi|315082875|gb|EFT54851.1| lysyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
          Length = 494

 Score = 40.8 bits (94), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 15/92 (16%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG---------LYRAFQCG 532
           +DL+  G E  +G      SE++        ++K+ +    G             A + G
Sbjct: 404 WDLIIGGMERGTG-----FSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFLEALEFG 458

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            PP GG+  G+DR+VML   A  +RE  LFP+
Sbjct: 459 CPPMGGLGLGVDRLVMLFTNA-GIRETILFPL 489


>gi|284008646|emb|CBA75269.1| lysyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 326

 Score = 40.8 bits (94), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 16/157 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR------DFLVPSRVNQGSFYAL 194
           N++KR +II  +R   I    +E  TPIL+  +            F+ P   +    Y +
Sbjct: 15  NLLKRAKIIAEIRRFFIDRGVVEVETPILSKFTVTDIHLSPFETQFIAPVIADSTKLYMI 74

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +QI   FR+E+      P EF  L+      +   +++ ++
Sbjct: 75  -TSPEYHMKRLLAAGSGPIYQIIKAFRNEEEGRYHNP-EFTMLEWYRPHYDMYRLIDEVD 132

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           ++L+ + +             RI Y  A +RY    P
Sbjct: 133 DLLQQILD--------CQPTERISYQQAFQRYLNIDP 161


>gi|238764674|ref|ZP_04625618.1| lysyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238697070|gb|EEP89843.1| lysyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 332

 Score = 40.8 bits (94), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 28/42 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A + G+P   G+A G+DR+VML LGA+ + +V  FP+ +
Sbjct: 290 LIAALKHGLPDCSGVALGVDRLVMLALGAERLSDVIAFPVDR 331


>gi|308810651|ref|XP_003082634.1| SYNO_ARATH Asparaginyl-tRNA synthetase, chloroplast/mitochondrial
           precursor (ISS) [Ostreococcus tauri]
 gi|116061103|emb|CAL56491.1| SYNO_ARATH Asparaginyl-tRNA synthetase, chloroplast/mitochondrial
           precursor (ISS) [Ostreococcus tauri]
          Length = 557

 Score = 40.8 bits (94), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 63/167 (37%), Gaps = 20/167 (11%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           D G S +G  + L      VR   GI F+D+ D   +T + A        +       W 
Sbjct: 55  DGGASRIGETLELRRLARSVRTPKGIAFIDLNDGSAMTGIQA--------VVSEGSGAWA 106

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L   G    + A            EL+  ++EI+  A+    P+  +R   E +R     
Sbjct: 107 LANSGAPGGKQA-----------AELAVDELEIIGGADPETYPLQKKRHTLEYLR-SIAH 154

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           L  R +T+      R  +  +         F+   TPI+TAS  EGA
Sbjct: 155 LRPRTNTIGAVARVRNELAYATHNFFQQNGFLYVHTPIITASDCEGA 201


>gi|332160011|ref|YP_004296588.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325664241|gb|ADZ40885.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 325

 Score = 40.8 bits (94), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 28/42 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A + G+P   G+A G+DR+VML LGA+ + +V  FP+ +
Sbjct: 283 LIDALKHGLPDCSGVALGVDRLVMLALGAEKLSDVIAFPVGR 324


>gi|313792704|gb|EFS40785.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|315078816|gb|EFT50838.1| lysyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|327457213|gb|EGF03868.1| lysyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
          Length = 494

 Score = 40.8 bits (94), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 15/92 (16%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG---------LYRAFQCG 532
           +DL+  G E  +G      SE++        ++K+ +    G             A + G
Sbjct: 404 WDLIIGGMERGTG-----FSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFLEALEFG 458

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            PP GG+  G+DR+VML   A  +RE  LFP+
Sbjct: 459 CPPMGGLGLGVDRLVMLFTNA-GIRETILFPL 489


>gi|153834942|ref|ZP_01987609.1| putative lysyl-tRNA synthetase homolog GenX [Vibrio harveyi HY01]
 gi|148868622|gb|EDL67708.1| putative lysyl-tRNA synthetase homolog GenX [Vibrio harveyi HY01]
          Length = 323

 Score = 40.8 bits (94), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A G+DR++ML LG  ++ +V+ FP
Sbjct: 281 LIGALEAGLPDCAGVALGVDRLIMLALGCDHIDQVTAFP 319


>gi|311695403|gb|ADP98276.1| tRNA synthetase, class II (D, K and N) [marine bacterium HP15]
          Length = 322

 Score = 40.8 bits (94), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   G+P   G+A G+DR++ML LG +++REV  FP  +
Sbjct: 283 ALDQGLPECSGVALGLDRLLMLKLGVQDIREVLAFPFER 321


>gi|269962499|ref|ZP_06176848.1| Lysyl-tRNA synthetase-related protein [Vibrio harveyi 1DA3]
 gi|269832795|gb|EEZ86905.1| Lysyl-tRNA synthetase-related protein [Vibrio harveyi 1DA3]
          Length = 323

 Score = 40.8 bits (94), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A G+DR++ML LG  ++ +V+ FP
Sbjct: 281 LIGALEAGLPDCAGVALGVDRLIMLALGCDHIDQVTAFP 319


>gi|323494462|ref|ZP_08099568.1| poxB regulator PoxA [Vibrio brasiliensis LMG 20546]
 gi|323311285|gb|EGA64443.1| poxB regulator PoxA [Vibrio brasiliensis LMG 20546]
          Length = 323

 Score = 40.8 bits (94), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 26/39 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML +G  ++ +V+ FP
Sbjct: 281 LIAALESGLPECAGVALGIDRLIMLAIGCDHIDQVTAFP 319


>gi|227497075|ref|ZP_03927324.1| lysine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226833440|gb|EEH65823.1| lysine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 558

 Score = 40.8 bits (94), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 481 QYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE+ +         ++    E    A +N      V++  F     A + G 
Sbjct: 468 KWDLYVRGFELGTAYSELADPVVQRERFEAQALAAANGDPEAMVLDEDF---LVAMEQGF 524

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           PP GG+  GIDR++M L G + +RE   FP+
Sbjct: 525 PPCGGMGMGIDRLLMALTG-QGIRETITFPL 554



 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 4/139 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           E  R + R LDL      +++V+ R  ++ S+R      +++E  TP+L        AR 
Sbjct: 214 EDNRVRRRELDLLTRPAARDMVRTRAAVVRSLRENFHRRDYLELETPMLQVIHGGAAARP 273

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y +  +  G DR F+I   FR+E   S   P EF  L+ 
Sbjct: 274 FVTHMNAFDMDLY-LRIATEIYLKRAVVGGVDRVFEINRNFRNEGADSSHSP-EFAALEA 331

Query: 240 EMSFVEQDDILNTMENVLR 258
             ++ + + +     N+++
Sbjct: 332 YEAYSDYNGMAELTRNLVQ 350


>gi|318607432|emb|CBY28930.1| lysyl-tRNA synthetase-related protein [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 325

 Score = 40.8 bits (94), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 28/42 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A + G+P   G+A G+DR+VML LGA+ + +V  FP+ +
Sbjct: 283 LIDALKHGLPDCSGVALGVDRLVMLALGAEKLSDVIAFPVGR 324


>gi|123440749|ref|YP_001004741.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166229788|sp|A1JIQ4|SYK3_YERE8 RecName: Full=Uncharacterized protein YjeA
 gi|122087710|emb|CAL10495.1| putative lysyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 325

 Score = 40.8 bits (94), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 28/42 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A + G+P   G+A G+DR+VML LGA+ + +V  FP+ +
Sbjct: 283 LIDALKHGLPDCSGVALGVDRLVMLALGAEKLSDVIAFPVGR 324


>gi|317046678|ref|YP_004114326.1| lysyl-tRNA synthetase-like protein GenX [Pantoea sp. At-9b]
 gi|316948295|gb|ADU67770.1| lysyl-tRNA synthetase-related protein GenX [Pantoea sp. At-9b]
          Length = 325

 Score = 40.8 bits (94), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 28/43 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           L  A + GMP   G+A G+DR++ML L A ++ EV  FP+ ++
Sbjct: 283 LLDALKHGMPACSGVALGVDRLIMLALKASSLSEVIAFPVDRS 325


>gi|153811292|ref|ZP_01963960.1| hypothetical protein RUMOBE_01684 [Ruminococcus obeum ATCC 29174]
 gi|149832790|gb|EDM87874.1| hypothetical protein RUMOBE_01684 [Ruminococcus obeum ATCC 29174]
          Length = 463

 Score = 40.8 bits (94), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 54/260 (20%), Positives = 99/260 (38%), Gaps = 30/260 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V + GWV  VR      F+ + D   +   QVV + +   F EI+K      ++    LV
Sbjct: 21  VTVGGWVRSVRGSKAFGFIVLHDGTFFETLQVVYHDNMPNFAEISKLNVGAAIIVRGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A ++++   A     P+  +R   E +R     L  R +T
Sbjct: 81  PTPEAKQ--------PFEIQADEVQVEG-ASAPDYPLQKKRHTLEYLR-TMTHLRPRTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+    ++        F+   TP++T S  EGA +    + ++  +       
Sbjct: 131 FQAVFRVRSLCAYAIHKFFQERGFVYVHTPLITGSDCEGAGEMFQVTTLDMKNPPLNEDG 190

Query: 198 PQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              Y Q                    A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 191 TVDYSQDFFGKETNLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAEFWMIEPE 250

Query: 241 MSFVEQDDILNTMENVLRGV 260
            +F + +D ++  E++L+ V
Sbjct: 251 CAFADLNDNMDLAEDMLKYV 270



 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G   H G   G +R VM L G  N+R+V  FP + N CDL
Sbjct: 422 KYGSTRHSGFGLGFERCVMYLTGMGNIRDVIPFPRTVNNCDL 463


>gi|197124172|ref|YP_002136123.1| tRNA synthetase class II (D K and N) [Anaeromyxobacter sp. K]
 gi|196174021|gb|ACG74994.1| tRNA synthetase class II (D K and N) [Anaeromyxobacter sp. K]
          Length = 339

 Score = 40.4 bits (93), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MP  GG+A G DR++MLL GA ++ +V LFP
Sbjct: 303 MPEAGGVAVGFDRVLMLLTGAASIEDVLLFP 333


>gi|308048215|ref|YP_003911781.1| lysyl-tRNA synthetase-related protein GenX [Ferrimonas balearica
           DSM 9799]
 gi|307630405|gb|ADN74707.1| lysyl-tRNA synthetase-related protein GenX [Ferrimonas balearica
           DSM 9799]
          Length = 323

 Score = 40.4 bits (93), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 26/40 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           L  A   G+P   G+A GIDR+VML L AK +++V  FP+
Sbjct: 281 LIAALAAGLPDCAGVALGIDRLVMLALDAKAIKDVIPFPV 320


>gi|270645372|ref|ZP_06222181.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270317246|gb|EFA28823.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 183

 Score = 40.4 bits (93), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR------AFQCGMP 534
           +++L   G EI +G    + +E   + F     +KE  ++    +++      A + G+P
Sbjct: 92  RFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDE--AMFKDEDFVVALEHGLP 149

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+ ML   A ++R+V LFP
Sbjct: 150 PTAGEGLGIDRLAMLYANAPSIRDVILFP 178


>gi|11691631|emb|CAC18673.1| putative Lysyl-tRNA synthetase [Erwinia chrysanthemi]
          Length = 137

 Score = 40.4 bits (93), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 28/42 (66%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A + G+PP  G+A G+DR+VM+ L A+++ EV  F + +
Sbjct: 95  LLAALEAGIPPCSGVALGVDRLVMMALNAESIGEVMAFTVDR 136


>gi|293190377|ref|ZP_06608809.1| lysine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292820961|gb|EFF79916.1| lysine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 539

 Score = 40.4 bits (93), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 11/95 (11%)

Query: 481 QYDLVCNGFE-------IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE       +A   ++    E    A +N      V++  F     A + G 
Sbjct: 448 KWDLYVRGFETGTAYSELADPVVQRERFEAQALAAANGDPEAMVMDEDF---LIAMEQGF 504

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PP GG+  GIDR++M+L G + +RE   FP+ +  
Sbjct: 505 PPCGGMGMGIDRLLMVLTG-QGIRETIPFPLVKRL 538


>gi|51244698|ref|YP_064582.1| lysyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|50875735|emb|CAG35575.1| probable lysyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 300

 Score = 40.4 bits (93), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 13/81 (16%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR----VNQGSFYALPQAPQQ 200
           R   + ++R     + F+E  TP+    SP      L+P      ++ G F+ L  +P+ 
Sbjct: 10  RAAFLQAIRAFFYEQGFLEVDTPV---RSP-----VLIPESTIEPISCGDFF-LQTSPEL 60

Query: 201 YKQLLMASGFDRYFQIAPCFR 221
           Y + ++A+G ++ FQI PCFR
Sbjct: 61  YMKRILAAGNEKIFQICPCFR 81


>gi|300113203|ref|YP_003759778.1| lysyl-tRNA synthetase-like protein GenX [Nitrosococcus watsonii
           C-113]
 gi|299539140|gb|ADJ27457.1| lysyl-tRNA synthetase-related protein GenX [Nitrosococcus watsonii
           C-113]
          Length = 332

 Score = 40.4 bits (93), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 13/130 (10%)

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
           C+I D+P  E      +      P  + +     LKG +L    A  Y  +C+  E    
Sbjct: 213 CFIYDYPASEAQLARIRPPSESCPRPLAERFEVYLKGMEL----ANGYHELCDAVE---- 264

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
             +    E  L      G+S EV  + F  L  A + G+P   G+A G+DR++ML L + 
Sbjct: 265 --QRQRFEADLIQRRRRGLS-EVPLDEF--LLAALEQGLPECAGVALGVDRLLMLQLNSA 319

Query: 555 NVREVSLFPM 564
            + EV  FP+
Sbjct: 320 RIEEVLAFPL 329


>gi|154507904|ref|ZP_02043546.1| hypothetical protein ACTODO_00389 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797538|gb|EDN79958.1| hypothetical protein ACTODO_00389 [Actinomyces odontolyticus ATCC
           17982]
          Length = 539

 Score = 40.4 bits (93), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 11/95 (11%)

Query: 481 QYDLVCNGFE-------IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE       +A   ++    E    A +N      V++  F     A + G 
Sbjct: 448 KWDLYVRGFETGTAYSELADPVVQRERFEAQALAAANGDPEAMVMDEDF---LIAMEQGF 504

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PP GG+  GIDR++M+L G + +RE   FP+ +  
Sbjct: 505 PPCGGMGMGIDRLLMVLTG-QGIRETIPFPLVKRL 538


>gi|320094628|ref|ZP_08026390.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319978437|gb|EFW10018.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 531

 Score = 40.4 bits (93), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 11/95 (11%)

Query: 481 QYDLVCNGFE-------IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           ++DL   GFE       +A   ++    E    A +N      V++  F     A + G 
Sbjct: 440 KWDLYVRGFETGTAYSELADPVVQRERFEAQALAAANGDPEAMVMDEDF---LVAMEQGF 496

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PP GG+  GIDR++M+L G + +RE   FP+ +  
Sbjct: 497 PPCGGMGMGIDRLLMVLTG-QGIRETIPFPLVKRL 530


>gi|223933850|ref|ZP_03625816.1| asparaginyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897468|gb|EEF63863.1| asparaginyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 101

 Score = 40.4 bits (93), Expect = 0.86,   Method: Composition-based stats.
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 4/74 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ K   E  F    R +  G  PHGG   GI+R+V  
Sbjct: 24  EIIGGSMREDNYDALVAKMDELGMDKS--EYEFYLDLRKY--GSVPHGGFGIGIERMVTF 79

Query: 550 LLGAKNVREVSLFP 563
           + G K++RE   FP
Sbjct: 80  VAGTKHIREAIPFP 93


>gi|307132775|ref|YP_003884791.1| putative lysyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306530304|gb|ADN00235.1| predicted lysyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 345

 Score = 40.4 bits (93), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 26/38 (68%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + G+PP  G+A G+DR+VM+ L A+++ EV  F
Sbjct: 303 LLAALEAGIPPCSGVALGVDRLVMMALNAESIGEVMAF 340


>gi|37527966|ref|NP_931311.1| lysyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|39932262|sp|Q7MZY6|SYK3_PHOLL RecName: Full=Uncharacterized protein YjeA
 gi|36787402|emb|CAE16493.1| Putative lysyl-tRNA synthetase (Lysine--tRNA ligase) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 325

 Score = 40.4 bits (93), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + GMP   G+A G+DR+VML LGA+ + +V  F +++
Sbjct: 286 ALKQGMPECAGVALGVDRLVMLALGAEKLSDVMAFSITK 324


>gi|291569064|dbj|BAI91336.1| lysyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 325

 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 9/173 (5%)

Query: 92  GQIELSAQKIEILSVAEELPLP--VFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRI 148
           G++ +   +++++S A  +P P   +G  + PE  R ++R +DL  ++      K R+RI
Sbjct: 134 GELSIQVSRLDVISKAT-IPFPDSYYGIND-PELCR-RHREIDLVSNSTSLQRFKLRSRI 190

Query: 149 INSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I S+R  +    F E  TP+L +       R F+          Y L  A + + +  + 
Sbjct: 191 IRSIRTYLWNAGFDEIETPVLQSIYGGVATRPFITHHNALDIDLY-LRIATELFLKRAVC 249

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            G ++ F+I   FR+E   S   P EF  +++  ++ +   I+  +E+++  V
Sbjct: 250 GGMEKVFEIGRVFRNEGIDSTHNP-EFTSIEVYQAYADYFQIMALVEDLICAV 301


>gi|271502186|ref|YP_003335212.1| lysyl-tRNA synthetase-like protein GenX [Dickeya dadantii Ech586]
 gi|270345741|gb|ACZ78506.1| lysyl-tRNA synthetase-related protein GenX [Dickeya dadantii
           Ech586]
          Length = 325

 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A   G+PP  G+A G+DR+VML L A+++ EV  F
Sbjct: 283 LLAALAAGIPPCSGVALGVDRLVMLALNAESIGEVMAF 320


>gi|212543239|ref|XP_002151774.1| asparaginyl-tRNA synthetase Slm5, putative [Penicillium marneffei
           ATCC 18224]
 gi|210066681|gb|EEA20774.1| asparaginyl-tRNA synthetase Slm5, putative [Penicillium marneffei
           ATCC 18224]
          Length = 560

 Score = 40.4 bits (93), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 56/267 (20%), Positives = 103/267 (38%), Gaps = 46/267 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSAC---FEIAKSVRSEWVLCIDG 75
           + L G++  VR      F +I D   +   Q +  P+ A       A  +   W  C  G
Sbjct: 58  ITLKGFIRSVRKQKRFAFAEISDGSTVKSLQAILTPEQAADLSTGTAIEISGIWKACPAG 117

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
              +               EL   +I I+  A+    P+  +++Y  S  F  +   LR 
Sbjct: 118 KEQTH--------------ELQTSEIRIVGDADAETYPI--QKKY-HSSDFLRQIPHLRL 160

Query: 136 DTLHKNIVKRTRIINSMRCRMIAEN-----FIECSTPILTASSPEGARDFLVPSRVNQGS 190
            T   +++ R R     +   +  +     FI+   P++T+S  EGA +    S  + G 
Sbjct: 161 RTPFSSLLARFRSETIYQLGQVFRSVPQGGFIQVQPPLITSSDCEGAGETFTLSPQSSGL 220

Query: 191 FYALPQAPQQYKQL------------------LMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               P+  ++ + L                    A+     + ++P FR E  ++ R   
Sbjct: 221 PLDSPKGSEELEYLHFFRNPKYLTVSSQLHLEAYAAELGNVWTLSPTFRAEKSKTPRHLS 280

Query: 233 EFYQLDMEMSFV-EQDDILNTMENVLR 258
           EFY L+ E++F  E   +L+ +E ++R
Sbjct: 281 EFYMLEAEVNFTNELPALLDLVEYLIR 307


>gi|297789439|ref|XP_002862686.1| hypothetical protein ARALYDRAFT_497343 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297308355|gb|EFH38944.1| hypothetical protein ARALYDRAFT_497343 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 446

 Score = 40.4 bits (93), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 12/181 (6%)

Query: 13  GVSDVGSFVRLSGWVH--RVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G    G  VR+ GWV   R +  G   FL++ D      +    DS+ +++++ V +   
Sbjct: 19  GAKLAGQKVRIGGWVKTGRQQGKGKFAFLEVNDGSCPANLQVMVDSSLYDLSRLVATGTC 78

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + +DG++            +   IEL+ + +  +   +    P+   +  PE +R     
Sbjct: 79  VTVDGVLKIPP----EGKGLKQSIELNVESVIDVGTVDPTKYPLPKTKLTPEFLR---DL 131

Query: 131 LDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVN 187
           L LR  T   + V R R  +  +         F+   TPI+T S  EGA + F V + +N
Sbjct: 132 LHLRSRTNLISAVARIRNALAFATHSFFQEHGFLYIHTPIITTSDCEGAGEMFQVTTLIN 191

Query: 188 Q 188
            
Sbjct: 192 H 192


>gi|297720131|ref|NP_001172427.1| Os01g0571700 [Oryza sativa Japonica Group]
 gi|255673379|dbj|BAH91157.1| Os01g0571700 [Oryza sativa Japonica Group]
          Length = 104

 Score = 40.4 bits (93), Expect = 0.92,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 21/38 (55%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIR 42
          R   C +LG  D G  VRL GWV   R H G+ FL +R
Sbjct: 56 RDELCDELGAGDAGRCVRLCGWVALHRAHAGLTFLILR 93


>gi|253580427|ref|ZP_04857692.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848157|gb|EES76122.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 463

 Score = 40.4 bits (93), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 54/261 (20%), Positives = 95/261 (36%), Gaps = 32/261 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           V + GWV  VR      F+ + D   +   QVV +     F EI+K      ++    LV
Sbjct: 21  VTVGGWVRSVRDSKTFGFIVLHDGSFFETLQVVYHDTMENFAEISKLNVGAAIIVKGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELP-LPVFGEREYPESIRFKYRFLDLRRD 136
            +  A+               Q  E+       P  P+  +R   E +R     L  R +
Sbjct: 81  ATPQAKQ----------PFEIQAAEVTVEGNSAPDYPLQKKRHSLEYLR-TITHLRPRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T       R+    ++      + F+   TP++T S  EGA +    + ++  +     +
Sbjct: 130 TFQAVFRVRSLCAYAIHRFFQEQGFVYVHTPLITGSDCEGAGEMFQVTTLDMNNVPTDDK 189

Query: 197 APQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               Y Q                    A  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 190 GAVDYSQDFFGKETNLTVSGQLNCETFAQAFRNVYTFGPTFRAENSNTTRHAAEFWMIEP 249

Query: 240 EMSFVEQDDILNTMENVLRGV 260
           E +F + +D ++  E +L+ V
Sbjct: 250 ECAFADLNDNMDLAEAMLKYV 270



 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E + +    +G+ KE  +  F    R +  G   H G   G +R VM 
Sbjct: 386 EIIGGSQREDDIEKLEKRMDELGLKKE--DYDFYLDLRKY--GSTRHSGFGLGFERCVMY 441

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G  N+R+V  FP +   CDL
Sbjct: 442 LTGMGNIRDVIPFPRTVKNCDL 463


>gi|300721668|ref|YP_003710943.1| putative lysyl-tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297628160|emb|CBJ88713.1| putative lysyl-tRNA synthetase with Class II aaRS and biotin
           synthetase domains [Xenorhabdus nematophila ATCC 19061]
          Length = 325

 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 25/40 (62%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           L  A   GMP   G+A G+DR++ML LGA  + +V  FP+
Sbjct: 283 LLAALAHGMPECAGVALGVDRLIMLALGADRMSDVIAFPV 322



 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 68/144 (47%), Gaps = 11/144 (7%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASS-------PEGARDFLVPSRVNQGSFYA 193
           N++KR +I+  +R        +E  TP ++ ++       P   R F+ P   +  + Y 
Sbjct: 15  NLLKRAKILAEIRRFFADRGVLEVETPAMSQATVTDIHLVPFQTR-FVGPGAADGLTLY- 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    +QI   FR+E+      P EF  L+      +   ++N +
Sbjct: 73  LMTSPEYHMKRLLAAGSGSIYQIGKSFRNEEAGRQHNP-EFTMLEWYRPHYDMYRLMNEV 131

Query: 254 ENVLRGVFE-EFSNGNTVSNNFLR 276
           +++L+ + E E +   +    F+R
Sbjct: 132 DDLLQQILECESAESLSYQQAFIR 155


>gi|269218271|ref|ZP_06162125.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269212399|gb|EEZ78739.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 515

 Score = 40.4 bits (93), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 4/139 (2%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           E  R + R LDL      +++V+ R  +  S+R       ++E  TP+L T      AR 
Sbjct: 173 EESRVRMRHLDLIMRPAARDMVRLRAGVTKSLRANFDDRGYLELETPMLQTIHGGAAARP 232

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y +  +  G D+ F+I   FR+E   S   P EF  ++ 
Sbjct: 233 FITHINAYNQDLY-LRIATELYLKRAVVGGVDKVFEINRNFRNEGADSSHSP-EFTAIEA 290

Query: 240 EMSFVEQDDILNTMENVLR 258
             ++   D +    +++++
Sbjct: 291 YEAYATYDTMAELTQSLVQ 309


>gi|146329769|ref|YP_001209514.1| lysyl-RNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|146233239|gb|ABQ14217.1| lysyl-RNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 303

 Score = 40.4 bits (93), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 4/78 (5%)

Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +CNGF E+A+   + H  E+  Q     G+    ++  F     A + G+P   G+A G+
Sbjct: 229 LCNGFWELANAKEQRHRFELDNQERLAAGLKPMPIDEAF---LSALERGLPDCAGVALGV 285

Query: 544 DRIVMLLLGAKNVREVSL 561
           DR+ ML  G  ++ EV L
Sbjct: 286 DRLFMLAQGKNHIAEVIL 303


>gi|320176648|gb|EFW51689.1| lysyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 325

 Score = 40.4 bits (93), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LG++ + EV  F
Sbjct: 283 LIEALKVGMPDCSGVALGVDRLVMLALGSETLAEVIAF 320


>gi|308189053|ref|YP_003933184.1| lysyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308059563|gb|ADO11735.1| putative lysyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 325

 Score = 40.4 bits (93), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 27/42 (64%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A   GMP   G+A GIDR++ML L A+++ EV  FP+ +
Sbjct: 283 LLDALAHGMPACSGVALGIDRLIMLALKAESLSEVIAFPVDR 324


>gi|307127750|ref|YP_003879781.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306484812|gb|ADM91681.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 217

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L   G+ EI  G +R    + ++     +G+ +   E  F    R +  G  PHGG   G
Sbjct: 133 LAPEGYGEIIGGSMREEDYDALVAKMDELGMDR--TEYEFYLDLRKY--GTVPHGGFGIG 188

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           I+R+V    G K++RE   FP
Sbjct: 189 IERMVTFAAGTKHIREAIPFP 209


>gi|156053|gb|AAA27849.1| 63kd antigen [Brugia malayi]
          Length = 548

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 59/281 (20%), Positives = 103/281 (36%), Gaps = 26/281 (9%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV-- 77
           V + GW+HR+R  G  ++F  +RD  G  QV+          A +V +E  + I G +  
Sbjct: 127 VCIKGWIHRMRRQGKSLMFFILRDGTGFLQVLLMDKLCQTYDALTVNTECTVEIYGAIKE 186

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    E  N +      EL A   +I+  A    +      E         R L +R + 
Sbjct: 187 VPEGKEAPNGH------ELIADFWKIIGNAPSGGIDNVLNEEASVDKMLDNRHLVIRGEN 240

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R     +MR       ++E + P L  +  EG           + SF  L Q+
Sbjct: 241 AAALLRLRAAATRAMREHFYNAGYVEVAPPTLVQTQVEGGSTLFNLDYFGEQSF--LTQS 298

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  + +  D +   +     +   S  L  E+  ++ E  F+  DD++  +E ++
Sbjct: 299 SQLYLETCIPTLGDVFLHCSVLQGGKISHSSTL-AEYAHVEAECPFITLDDLMEKIEELV 357

Query: 258 RGVFEEFSNGNTVSN--------------NFLRICYDDAIR 284
               +                         FLR+ Y DAI+
Sbjct: 358 CDTVDRLLADEEAKKLLEHINPKFQPPERPFLRMEYKDAIK 398


>gi|213025126|ref|ZP_03339573.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 189

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 8/158 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 17  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 73

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 74  KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 130

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           N  K R++I+  +R  M+A  F+E  TP++    P GA
Sbjct: 131 NTFKTRSKILAGIRQFMVARGFMEVETPMMQV-IPGGA 167


>gi|298207133|ref|YP_003715312.1| asparaginyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849767|gb|EAP87635.1| asparaginyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 480

 Score = 40.4 bits (93), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 55/262 (20%), Positives = 107/262 (40%), Gaps = 33/262 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + ++GWV   R +    FL + D   I   Q V + ++   +I K +     + I G++ 
Sbjct: 19  IAVNGWVKAFRSNR---FLALNDGSTINNLQCVIDFENLPEDILKEINIGAAVRIKGILE 75

Query: 79  SRSAETINANIITGQ-IELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRR 135
                        GQ +E+  + I+I  VA  E++ L +   + +      +   L +R 
Sbjct: 76  ESEG--------AGQRVEIQVKDIKIEGVANPEDVKLTILSPKRHSLEKLREQAHLRVRT 127

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVPSRVN 187
           +T    +  R+++  ++        F   +TPI+T S  EGA         D   P++  
Sbjct: 128 NTGAAVMRLRSKLSFAVHKYFQDNGFYYVNTPIITGSDAEGAGEMFKVTAMDLKNPAKNE 187

Query: 188 QGS------FYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            GS      F+          Q +    A G  + +   P FR E+  + R   EF+ ++
Sbjct: 188 DGSINYKEDFFGKETNLTVSGQLEAETFALGLGQVYTFGPTFRAENSNTSRHLAEFWMIE 247

Query: 239 MEMSFVEQDDILNTMENVLRGV 260
            E++F +    ++  E+ ++ V
Sbjct: 248 PEVAFCDLAGNMDLAEDFIKYV 269


>gi|302759579|ref|XP_002963212.1| hypothetical protein SELMODRAFT_79569 [Selaginella moellendorffii]
 gi|300168480|gb|EFJ35083.1| hypothetical protein SELMODRAFT_79569 [Selaginella moellendorffii]
          Length = 287

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + GMPP  G+  GIDR+VMLL  + ++ +V  FP+
Sbjct: 246 ALEYGMPPTAGMGIGIDRLVMLLTDSPSIGDVIAFPV 282


>gi|261493892|ref|ZP_05990404.1| lysyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495158|ref|ZP_05991622.1| lysyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261309228|gb|EEY10467.1| lysyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310494|gb|EEY11685.1| lysyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 327

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 14/135 (10%)

Query: 437 IMDFPFYEWNE----EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL----VCNG 488
           ++ F F E  E    +E+     H P T  Q  +  +   D    + F++      +CNG
Sbjct: 193 LLQFLFSEVVEANIGQERPTAVYHFPST--QAALAQISSEDHRVAERFEFYYKGLELCNG 250

Query: 489 F-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           F E+     + H  E        +G+  + ++ RF     A + G P   G+A G+DR++
Sbjct: 251 FHELDDADEQIHRFEQDNLQREKMGLEPQQLDVRFLA---ALKAGFPNCSGVALGVDRLL 307

Query: 548 MLLLGAKNVREVSLF 562
           ML + A+ + EV  F
Sbjct: 308 MLAMDAEKIEEVISF 322


>gi|146310009|ref|YP_001175083.1| lysyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166980063|sp|A4W5Q2|SYK3_ENT38 RecName: Full=Uncharacterized protein YjeA
 gi|145316885|gb|ABP59032.1| lysyl-tRNA synthetase-related protein GenX [Enterobacter sp. 638]
          Length = 325

 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + G+P   G+A G+DR+VML LGA+ + +V  F
Sbjct: 283 LLEALKAGLPDSSGVALGVDRLVMLALGAEQLADVIAF 320


>gi|312889925|ref|ZP_07749469.1| asparaginyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311297457|gb|EFQ74582.1| asparaginyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 479

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 106/275 (38%), Gaps = 29/275 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L     G  V + GWV   R +  I   D   +  I Q+V + ++    + K 
Sbjct: 4   RTKIKALLTGEQTGMEVTVMGWVRAFRQNRFIALNDGSTNNNI-QIVVDFENTDPALLKR 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPV-FGEREYPE 122
           +     + + G+        ++ ++  GQ +E+ A  IE+L   +    P+    R   E
Sbjct: 63  ITVGAAISVSGI--------LSESLGQGQKVEIPASVIEVLGDCDPEKYPLQLKNRPSLE 114

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +   L  R +T       R  +  ++        F+   TP++TAS  EGA +   
Sbjct: 115 YLR-EIAHLRFRTNTFGSVFRLRNALSFAVHRFFQERGFVYLHTPVITASDAEGAGETFR 173

Query: 183 PSRVNQGSFYALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDP 225
            + ++             +KQ                  L A      +   P FR E+ 
Sbjct: 174 VTTLDPAKPPLTESGEIDFKQDFFGKATNLTVSGQLEGELGAMALSDIYTFGPTFRAENS 233

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            + R   EF+ ++ EM+F +  + ++T E +L+ V
Sbjct: 234 NTTRHLAEFWMIEPEMAFCDLAENMDTAEALLKYV 268


>gi|229819217|ref|YP_002880743.1| lysyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229565130|gb|ACQ78981.1| lysyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 503

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 5/163 (3%)

Query: 111 PLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP        E  R + R+LDL  R      +  R  ++ ++R      +F+E  TP+L
Sbjct: 150 PLPTL-HAGTSEETRVRRRYLDLIARPAARDVVRVRAEVVRALRAAFHERDFVEVETPML 208

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T      AR F+          Y L  AP+ + +  +  G DR F+I   FR+E   S 
Sbjct: 209 QTQPGGAAARPFVTHMNAYDIDLY-LRIAPELFLKQAVVGGIDRVFEINRNFRNEGADSS 267

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
             P EF  L+   ++ + D +    + +++          TV+
Sbjct: 268 HSP-EFAMLEAYEAYSDYDGMARLTQELVQSSARAALGSTTVT 309


>gi|270619647|ref|ZP_06221826.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270317821|gb|EFA29180.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 82

 Score = 40.0 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+ ML   A ++R+V LFP
Sbjct: 42  ALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFP 77


>gi|289812204|ref|ZP_06542833.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 309

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 23/119 (19%)

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ--------------------QYKQ 203
            STP++TAS  EGA +     RV+      LP+  Q                    Q   
Sbjct: 3   VSTPLITASDTEGAGEMF---RVSTLDLENLPRNDQGRVDFDKDFFGKESFLTVSGQLNG 59

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
              A    + +   P FR E+  + R   EF+ L+ E++F + +D     E +L+ VF+
Sbjct: 60  ETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFADLEDNARLAEAMLKYVFK 118



 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 224 DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 278

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 279 LGFERLIAYVTGVQNVRDVIPFPRT 303


>gi|159470225|ref|XP_001693260.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158277518|gb|EDP03286.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 535

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 17/171 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRP--HGGIIFLDIRD--HYGITQVVANPDSACFEIAKSVRSE 68
           GVS VG  +R+ GWV   R    G   FL++ D   +   QV+ + +    +    V + 
Sbjct: 10  GVSQVGQTLRVGGWVKTGREAGAGAFCFLEVNDGSMFDSLQVMVSKEVGGLKTL--VPTG 67

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + ++G + +    T  A      +EL A KI  +  ++    P+  ++   E +R K 
Sbjct: 68  TSVLVEGHLEATPEGTKQA------VELKATKIVHVGPSDAATYPIAKKKTTYEFLREK- 120

Query: 129 RFLDLRRDTLHKNIVKRTR-IINSMRCRMIAEN-FIECSTPILTASSPEGA 177
             + LR  +   + V R R  +     R   EN F+   TPI+TAS  EGA
Sbjct: 121 --MHLRPRSNTISAVARIRNALAFATHRFFQENGFLYVHTPIITASDCEGA 169


>gi|85086144|ref|XP_957635.1| lysyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|28918729|gb|EAA28399.1| lysyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|29150133|emb|CAD79693.1| probable lysine-tRNA ligase [Neurospora crassa]
          Length = 618

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L    ++REV  FP
Sbjct: 552 ALEYGLPPTGGWGLGIDRLAMFLTDNYSIREVLAFP 587



 Score = 38.5 bits (88), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 51/262 (19%), Positives = 111/262 (42%), Gaps = 23/262 (8%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSAC-FEIAKS-----------VRS 67
           +R++G ++ +R  G  +IF DIR       +       C  ++AK            +R 
Sbjct: 129 LRIAGRIYNIRTAGSKLIFYDIRTSADTKSIGTRMQVVCQAQLAKEGGVPFEKQHAHLRR 188

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP---ESI 124
             ++ I G     + + +      G++ + A ++++LS      L +     YP      
Sbjct: 189 GDIIGIVGFPGRTNPKNLKEGE-QGELSVFATEVQLLSPC----LHMLPSVRYPFADAEQ 243

Query: 125 RFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           R + R+LD L  D   + + +R+R++  +R       FIE  TP++ A +        V 
Sbjct: 244 RARMRYLDMLWNDRSRETLWQRSRMVRYIRDFFHERRFIEVETPMMHAIAGGATALPFVT 303

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              +      +  AP+ + + ++   F + F++   FR+E       P EF  ++   ++
Sbjct: 304 HHNDLDMDMFMRVAPELFLKKMIVGQFGKVFEMGKNFRNEGIDLTHNP-EFTSIEFYWAY 362

Query: 244 VEQDDILNTMENVLRGVFEEFS 265
            +  D+++  E ++  + +E +
Sbjct: 363 ADVYDLMSITEELVSSLVKELT 384


>gi|291546668|emb|CBL19776.1| asparaginyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 463

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 57/279 (20%), Positives = 101/279 (36%), Gaps = 34/279 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRD--HYGITQVVANPDSACF-EIAKSVRSEWVLCIDGLV 77
           + + GWV  VR      F+ + D   +   Q+V + +   F E++K      ++    LV
Sbjct: 21  ITVGGWVRSVRDSKAFGFIVLHDGSFFETLQIVYHDNMENFAEVSKLNVGAAIIVKGTLV 80

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A+           E+ A +I +   A     P+  +R   E +R     L  R +T
Sbjct: 81  ATPQAKQ--------PFEIQATEISVEG-ASAPDYPLQKKRHSLEYLR-TMTHLRPRTNT 130

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R+    ++        F+   TP++T S  EGA +    + ++  +       
Sbjct: 131 FQAVFRVRSLCAYAIHKFFQERGFVYVHTPLITGSDCEGAGEMFQVTTLDPKNIPLTEDG 190

Query: 198 PQQYKQLLM-----------------ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              Y Q                    A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 191 SVDYSQDFFGKETNLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAEFWMIEPE 250

Query: 241 MSFVEQDDILNTMEN----VLRGVFEEFSNGNTVSNNFL 275
            +F +  D +   E     V+R VFE         N+F+
Sbjct: 251 CAFADLQDAMELAEAMLKYVIRYVFENAPEEMNFFNSFI 289


>gi|302409622|ref|XP_003002645.1| lysyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261358678|gb|EEY21106.1| lysyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 384

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 27/55 (49%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
           +A + G+PP GG   G+DR+VML  GA  + +   F   +N   L    P   + 
Sbjct: 316 KAMEAGLPPTGGWGCGVDRLVMLFSGANRISDCLTFGTLRNVVGLSAEGPGQAAA 370


>gi|300176814|emb|CBK25383.2| unnamed protein product [Blastocystis hominis]
          Length = 511

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 14/79 (17%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPHGGIAAGID 544
           E+  G  R    +V+ +    +G++KE +E      R+G +         PH G   G +
Sbjct: 434 ELIGGSQREENLDVLEKRIEELGMAKEGLEWYLDLRRYGSV---------PHSGFGLGFE 484

Query: 545 RIVMLLLGAKNVREVSLFP 563
           R+VM + G +N+R+V  FP
Sbjct: 485 RLVMFVTGMENIRDVIPFP 503


>gi|50310555|ref|XP_455297.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644433|emb|CAG98005.1| KLLA0F04796p [Kluyveromyces lactis]
          Length = 517

 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 58/115 (50%), Gaps = 3/115 (2%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP-SRVNQGSFYALPQAPQQYK 202
           R  +   +R  +  + FIE  TPI+++ S+   A+ F+   + +++   + L  AP+ + 
Sbjct: 190 RHLVTKRIREWLYKQEFIEVETPIISSKSNGANAKPFITHCTAIDKEQPFELRIAPELWL 249

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           + L   G ++ F+I   FR+E   S   P EF  L+    ++  + ++   E++L
Sbjct: 250 KRLCIGGMNKIFEIGKVFRNEGIDSTHNP-EFTTLEFYQCYINMEQLIEMSESLL 303



 Score = 38.9 bits (89), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +A + GMPP GG   GIDR+ MLL   + + EV  F
Sbjct: 473 QAMKYGMPPIGGFGLGIDRLCMLLADTQRIEEVLSF 508


>gi|328948871|ref|YP_004366208.1| asparaginyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328449195|gb|AEB14911.1| Asparaginyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 486

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 25/109 (22%)

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR- 258
           Q +   MA+   R +   P FR E+  + R   EF+ ++ EM+F + DD ++  E+ ++ 
Sbjct: 230 QLEAETMATALSRVYTFGPTFRAENSNTPRHLAEFWMIEPEMAFFDLDDDMDIQEDFVKY 289

Query: 259 ----------------------GVFEEFSNGNTVSNNFLRICYDDAIRR 285
                                 G+ E           F+RI Y DAI +
Sbjct: 290 LLNWALTKCRSDLEFFDKRIQPGLIESLE--KVAKAKFVRISYTDAIAK 336


>gi|220918952|ref|YP_002494256.1| tRNA synthetase class II (D K and N) [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956806|gb|ACL67190.1| tRNA synthetase class II (D K and N) [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 339

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MP  GG+A G DR++MLL G  ++ +V LFP +  F D
Sbjct: 303 MPEAGGVAVGFDRVLMLLTGGASIEDVLLFP-AHGFWD 339


>gi|12851415|dbj|BAB29032.1| unnamed protein product [Mus musculus]
          Length = 251

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 168 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 223

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  +L   ++R+V L+P     C
Sbjct: 224 ERFLSWILNRYHIRDVCLYPRFLQRC 249


>gi|314917261|gb|EFS81092.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
          Length = 494

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A + G PP GG+  G+DR+VML   A  +RE  LFP+
Sbjct: 454 ALEFGCPPMGGLGLGVDRLVMLFTNA-GIRETILFPL 489


>gi|153801330|ref|ZP_01955916.1| asparaginyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124123155|gb|EAY41898.1| asparaginyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 368

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 64/163 (39%), Gaps = 38/163 (23%)

Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ-------LLMASG-- 209
           + +   S P++TAS  EGA +    S ++  +          Y Q        L  SG  
Sbjct: 57  QGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQL 116

Query: 210 --------FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
                     + +   P FR E+  + R   EF+ ++ E++F + + +    E++L+ VF
Sbjct: 117 NAEAYACAISKVYTFGPTFRAENSNTSRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVF 176

Query: 262 E----------EFSNGNT-----------VSNNFLRICYDDAI 283
           +          EF N              V ++F ++ Y DAI
Sbjct: 177 KAVLAERRDDLEFFNDRINNEVIARLEQFVESDFAQVDYTDAI 219


>gi|289619755|emb|CBI54038.1| unnamed protein product [Sordaria macrospora]
          Length = 618

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M L    ++REV  FP
Sbjct: 552 ALEYGLPPTGGWGLGIDRLAMFLTDNYSIREVLAFP 587



 Score = 37.7 bits (86), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 51/262 (19%), Positives = 111/262 (42%), Gaps = 23/262 (8%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSAC-FEIAKS-----------VRS 67
           +R++G ++ +R  G  +IF DIR       +       C  ++AK            +R 
Sbjct: 129 LRIAGRIYNIRTAGAKLIFYDIRTSADTKSIGTRMQVVCQAQLAKEGGVPFEKQHAHLRR 188

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP---ESI 124
             ++ I G     + + +      G++ + A ++++LS      L +     YP      
Sbjct: 189 GDIIGIVGYPGRTNPKNLKEGE-QGELSVFATEVQLLSPC----LHMLPSVRYPFADAEQ 243

Query: 125 RFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           R + R+LD L  D   + + +R+R++  +R       FIE  TP++ A +        V 
Sbjct: 244 RARMRYLDMLWNDRSRETLWQRSRMVRYIRDFFHERRFIEVETPMMHAIAGGATALPFVT 303

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              +      +  AP+ + + ++   F + F++   FR+E       P EF  ++   ++
Sbjct: 304 HHNDLDMDMFMRVAPELFLKKMIVGQFGKVFEMGKNFRNEGIDLTHNP-EFTSIEFYWAY 362

Query: 244 VEQDDILNTMENVLRGVFEEFS 265
            +  D+++  E ++  + +E +
Sbjct: 363 ADVYDLMSITEELVSSLVKELT 384


>gi|68076563|ref|XP_680201.1| asparagine--t RNA ligase [Plasmodium berghei strain ANKA]
 gi|56501100|emb|CAH97288.1| asparagine--t RNA ligase, putative [Plasmodium berghei]
          Length = 646

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 12/83 (14%)

Query: 490 EIASGGIR----NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
           EIA G  R    N + + M +   N+ +    +E R        + G  PH G   GIDR
Sbjct: 569 EIAGGSERETNLNILKDQMKKNKLNIDLYNPYLELR--------KYGNIPHSGFGLGIDR 620

Query: 546 IVMLLLGAKNVREVSLFPMSQNF 568
           ++M +L   N+R++  FP   N+
Sbjct: 621 LIMYILSMSNIRDIVPFPRYPNY 643


>gi|10440131|dbj|BAB15655.1| unnamed protein product [Homo sapiens]
          Length = 250

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGV 260
           M+  F + F   P FR E+ +S R   EFY ++ E+SFV+   D++  +E + +  
Sbjct: 1   MSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVDSLQDLMQVIEELFKAT 56



 Score = 37.4 bits (85), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  GG+R      + +  +  G++ EV +      RFG +         PH
Sbjct: 166 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 215

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG   G +R +  +LG  N+++V  FP   + C L
Sbjct: 216 GGFGIGFERYLQCILGVDNIKDVIPFPRFPHSCLL 250


>gi|218551427|ref|YP_002385219.1| lysyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226737087|sp|B7LLT9|SYK3_ESCF3 RecName: Full=Uncharacterized protein YjeA
 gi|218358969|emb|CAQ91629.1| lysyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|324112245|gb|EGC06223.1| tRNA synthetase class II [Escherichia fergusonii B253]
 gi|325499693|gb|EGC97552.1| lysyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 325

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR+VML LGA+ + +V  F
Sbjct: 283 LIEALKVGMPDCSGVALGVDRLVMLALGAERLSDVIAF 320


>gi|332211191|ref|XP_003254703.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           isoform 2 [Nomascus leucogenys]
          Length = 250

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGV 260
           M+  F + F   P FR E+ +S R   EFY ++ E+SFV+   D++  +E + +  
Sbjct: 1   MSGAFTQVFAFGPTFRAENSQSRRHLAEFYMIEAEISFVDSLQDLMQVIEKLFKAT 56



 Score = 37.4 bits (85), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 16/95 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  GG+R      + +  +  G++ EV +      RFG +         PH
Sbjct: 166 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 215

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG   G +R +  +LG  N+++V  FP     C L
Sbjct: 216 GGFGMGFERYLQCILGVDNIKDVIPFPRFPRSCVL 250


>gi|212711000|ref|ZP_03319128.1| hypothetical protein PROVALCAL_02069 [Providencia alcalifaciens DSM
           30120]
 gi|212686168|gb|EEB45696.1| hypothetical protein PROVALCAL_02069 [Providencia alcalifaciens DSM
           30120]
          Length = 325

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 27/41 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           L  A + G+P   G+A G+DR++ML L A+ + +V  FP++
Sbjct: 283 LLAALEHGLPACSGVAVGVDRLIMLALNAERISDVIAFPVT 323


>gi|119595467|gb|EAW75061.1| asparaginyl-tRNA synthetase 2 (mitochondrial)(putative), isoform
           CRA_a [Homo sapiens]
          Length = 250

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGV 260
           M+  F + F   P FR E+ +S R   EFY ++ E+SFV+   D++  +E + +  
Sbjct: 1   MSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVDSLQDLMQVIEELFKAT 56



 Score = 37.7 bits (86), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  GG+R      + +  +  G++ EV +      RFG +         PH
Sbjct: 166 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 215

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG   G +R +  +LG  N+++V  FP   + C L
Sbjct: 216 GGFGMGFERYLQCILGVDNIKDVIPFPRFPHSCLL 250


>gi|332837318|ref|XP_003313275.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           isoform 1 [Pan troglodytes]
          Length = 250

 Score = 40.0 bits (92), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGV 260
           M+  F + F   P FR E+ +S R   EFY ++ E+SFV+   D++  +E + +  
Sbjct: 1   MSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVDSLQDLMQVIEELFKAT 56



 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  E+  GG+R      + +  +  G++ EV +      RFG +         PH
Sbjct: 166 DLLVPGVGELFGGGLREERYHFLEERLARSGLT-EVYQWYLDLRRFGSV---------PH 215

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG   G +R +  +LG  N+++V  FP   + C L
Sbjct: 216 GGFGMGFERYLQCVLGVDNIKDVIPFPRFPHSCLL 250


>gi|94265194|ref|ZP_01288956.1| tRNA synthetase, class II (G, H, P and S):tRNA synthetase, class II
           (D, K and N) [delta proteobacterium MLMS-1]
 gi|93454335|gb|EAT04642.1| tRNA synthetase, class II (G, H, P and S):tRNA synthetase, class II
           (D, K and N) [delta proteobacterium MLMS-1]
          Length = 355

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 8/116 (6%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           N+  R  +I ++R      +++E  TP+L  A +PE     L+P R  +   + L  +P+
Sbjct: 3   NLWLRAAMIRAIRRFFEQRHYLEVETPLLIPAPAPE---PHLLPQRAGK---WFLQTSPE 56

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
              + L+A G  R +QI  CFR ++     LP EF  L+   +  +  D++   E 
Sbjct: 57  ICMKRLLARGIPRIYQICKCFRRQERGRRHLP-EFTMLEWYRAGADYYDLMAECEE 111


>gi|126666940|ref|ZP_01737916.1| lysyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126628656|gb|EAZ99277.1| lysyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 322

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   G+P   G+A G+DR++ML LGA ++ EV  FP ++
Sbjct: 283 AMDSGLPDCAGVALGLDRLLMLKLGASSIDEVLAFPFAR 321


>gi|307824008|ref|ZP_07654235.1| tRNA synthetase class II (D K and N) [Methylobacter tundripaludum
           SV96]
 gi|307734792|gb|EFO05642.1| tRNA synthetase class II (D K and N) [Methylobacter tundripaludum
           SV96]
          Length = 306

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 14/102 (13%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGI---------RNHMSEVMLQAFSNVGISKEVVENRF 522
           N+  S+   + +L  NG E+ +G           +    E++++    + +S  V + R 
Sbjct: 207 NEQCSLITDRVELFINGIELGNGYYELVDADEQSKRFNKELVIRQQQKLAVS--VKDKR- 263

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             L  A + G+P   G+A G+DR++MLL G++++ +V  FP+
Sbjct: 264 --LVSALESGLPECSGVAIGLDRLLMLLSGSESIEDVLSFPI 303


>gi|227514340|ref|ZP_03944389.1| possible lysine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087312|gb|EEI22624.1| possible lysine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 248

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 15/167 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F D+ D  G  Q     D    E  K  +   +    G+    
Sbjct: 62  VTIAGRMIGKRGSGKASFADLLDRGGKIQFYVRQDMVGEEAYKLFKESDLGDFWGI---- 117

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDL--RRDT 137
           + + I   +  G++ + A+KI  LS A   PLP  +   + PE + ++ R+LDL   R++
Sbjct: 118 TGDVIKTRM--GELTVRAEKITFLSKALR-PLPDKYHGLQDPELV-YRQRYLDLITNRES 173

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILT--ASSPEGARDFLV 182
             +    RT+II ++R  M    F+E  TPIL   AS  E AR F+ 
Sbjct: 174 FER-FQTRTKIIKAVRRYMDDNGFLEVETPILENIASGAE-ARPFVT 218


>gi|313829496|gb|EFS67210.1| conserved domain protein [Propionibacterium acnes HL063PA2]
          Length = 83

 Score = 40.0 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           A +  MPP GG+  G+DR+VM+L  A ++RE   FP+
Sbjct: 42  ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFPL 77


>gi|229515672|ref|ZP_04405131.1| asparaginyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229347441|gb|EEO12401.1| asparaginyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 356

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 64/163 (39%), Gaps = 38/163 (23%)

Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ-------LLMASG-- 209
           + +   S P++TAS  EGA +    S ++  +          Y Q        L  SG  
Sbjct: 45  QGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQL 104

Query: 210 --------FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
                     + +   P FR E+  + R   EF+ ++ E++F + + +    E++L+ VF
Sbjct: 105 NAEAYACAISKVYTFGPTFRAENSNTSRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVF 164

Query: 262 E----------EFSNGNT-----------VSNNFLRICYDDAI 283
           +          EF N              V ++F ++ Y DAI
Sbjct: 165 KAVLAERRDDLEFFNDRINNEVIARLEQFVESDFAQVDYTDAI 207


>gi|226507460|ref|NP_001147875.1| LOC100281485 [Zea mays]
 gi|195614288|gb|ACG28974.1| asparaginyl-tRNA synthetase, cytoplasmic 3 [Zea mays]
          Length = 565

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 14/97 (14%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPHGG 538
           LV    E+  G  R    +V+ Q   + G+  E  E      RFG +          H G
Sbjct: 478 LVPKVGELIGGSQREERLDVLKQRILDAGLPLEPYEWYLDLRRFGSV---------KHSG 528

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
              G +R+++   G +N+R+V  FP S+ F   +MG 
Sbjct: 529 FGLGFERMILFATGMENIRDVIPFPSSKKFYAQIMGK 565


>gi|156932390|ref|YP_001436306.1| lysyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|156530644|gb|ABU75470.1| hypothetical protein ESA_00166 [Cronobacter sakazakii ATCC BAA-894]
          Length = 355

 Score = 40.0 bits (92), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 26/38 (68%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + G+P   G+A G+DR++ML LGA+++ EV  F
Sbjct: 313 LLEALKVGLPDCSGVALGVDRLIMLALGAESLAEVIAF 350


>gi|302340139|ref|YP_003805345.1| tRNA synthetase class II (D K and N) [Spirochaeta smaragdinae DSM
           11293]
 gi|301637324|gb|ADK82751.1| tRNA synthetase class II (D K and N) [Spirochaeta smaragdinae DSM
           11293]
          Length = 324

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 7/152 (4%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFL----VPSRVNQGSFYALPQ 196
           I+ R+R+  ++R    ++ F+E  TP L+ +  PE   +         R  +   Y LP 
Sbjct: 6   ILFRSRLNRAVRNFFESKGFLEVETPQLSPTVIPEAHIELFSTRFFSDRFGERELYLLP- 64

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+ + + L+A G    FQI   FR+++  S     EF  L+        ++ + T E +
Sbjct: 65  SPEIHMKQLIAEGSGSIFQICKSFRNDEQMSHYHNPEFSMLEWYAVQGSSEENIATTEEL 124

Query: 257 LRGVFEEFS-NGNTVSNNFLRICYDDAIRRYG 287
              + E    +G  +S  F R+   +A  R+ 
Sbjct: 125 FSCLAETLHRDGEYLSPPFRRMTMAEAFDRFA 156


>gi|332084295|gb|EGI89498.1| lysyl-tRNA synthetase domain protein [Shigella dysenteriae 155-74]
          Length = 37

 Score = 39.7 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/31 (48%), Positives = 21/31 (67%)

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP  G+  GIDR++ML   +  +R+V LFP
Sbjct: 1   MPPTAGLGIGIDRMIMLFTNSHTIRDVILFP 31


>gi|218781608|ref|YP_002432926.1| tRNA synthetase class II (D K and N) [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762992|gb|ACL05458.1| tRNA synthetase class II (D K and N) [Desulfatibacillum
           alkenivorans AK-01]
          Length = 299

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 10/88 (11%)

Query: 485 VCNGFEIASGGIR--NHMSEVMLQAFSNVGISKEVVENRFGGLY-----RAFQCG---MP 534
           +   FE+  GG+   N  SE++           E  E    G         F C    MP
Sbjct: 207 LAERFELYIGGMEMANAFSELVDPVVQAERFKMEEEERVLAGKKPYPSNEKFLCALETMP 266

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           P  GIA G+DR+ ML  GA ++ ++S F
Sbjct: 267 PSAGIALGVDRLAMLFAGAADIAQISAF 294



 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 17/158 (10%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQAP 198
           K +  R  ++  +R    ++ F++  TPI + A  PE   D  VPS       + L  +P
Sbjct: 5   KQLQIRADLLFHIRRFFRSQGFLDVETPIRIPAPIPEAHID-AVPSLD-----WYLHTSP 58

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L++ G+++ FQI   FR E+  +  LP EF  L+   +  + + ++   EN+L 
Sbjct: 59  ESCMKRLLSQGYEKIFQICRVFRAEELGARHLP-EFTMLEWYRTDADYNQLMTDCENLLA 117

Query: 259 GVFEEFSNGNTV---------SNNFLRICYDDAIRRYG 287
              E   +   +         S ++ R    DA R+Y 
Sbjct: 118 FCLESMPDRAPLVYQGKRIDASPSWRRESVSDAFRKYA 155


>gi|70953346|ref|XP_745780.1| asparagine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56526209|emb|CAH77791.1| asparagine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 605

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 29/47 (61%)

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           L Q+PQ YKQ+++   +++ F+I   +R+E   S +   EF  LD+E
Sbjct: 106 LAQSPQFYKQMIINYDYEKIFEINYSYRNEKFHSTKHLNEFLSLDIE 152


>gi|326482806|gb|EGE06816.1| lysyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 515

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 23/39 (58%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G  +  + G+PP GG   GIDR+ ML  GA+ + +V  F
Sbjct: 459 GYLQTLEWGLPPTGGWGCGIDRVCMLFTGARRISDVLSF 497


>gi|261749579|ref|YP_003257265.1| asparaginyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497672|gb|ACX84122.1| asparaginyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 474

 Score = 39.7 bits (91), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    +++L+   +    K + + +        + G  PH G   G DR+V  
Sbjct: 397 EIIGGSQREERYDILLKRIKD----KNIDDRKLWWYLDTRRFGSVPHSGFGLGFDRLVQF 452

Query: 550 LLGAKNVREVSLFPMS 565
           + G KN+R+V  FP +
Sbjct: 453 ITGMKNIRDVIPFPRT 468


>gi|289812475|ref|ZP_06543104.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 216

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 7/150 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L   G ++  
Sbjct: 63  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGA 119

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   +
Sbjct: 120 KGKLFKTK--TGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESR 176

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           N  K R++I+  +R  M+A  F+E  TP++
Sbjct: 177 NTFKTRSKILAGIRQFMVARGFMEVETPMM 206


>gi|221130529|ref|XP_002161050.1| PREDICTED: similar to Asparaginyl-tRNA synthetase CG10687-PA,
           partial [Hydra magnipapillata]
          Length = 512

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 9/152 (5%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVR--SEWVLCIDGLV 77
           V++ GWVHR+R  G  ++F+ +RD  G  Q V N D  C +   +VR  +E  + + G +
Sbjct: 127 VKIYGWVHRLRQQGKNLMFIVLRDGTGFLQCVLN-DQLC-QTYNAVRLSTESSVLLYGTI 184

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                E        G  E+     E++  +    L      +     +   R L LR + 
Sbjct: 185 Q----ELPEGKSAPGGHEMIVDYWEVVGFSPAGGLENVVTEQSSIDTQLDNRHLTLRGEH 240

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           L K +  R+ + +  R    A  ++E + P L
Sbjct: 241 LSKILRIRSTVTHCFREHYFARGYVEITPPTL 272


>gi|112832|sp|P10723|SYNC_BRUMA RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS; AltName:
           Full=Potentially protective 63 kDa antigen
 gi|156057|gb|AAA27852.1| 63 kd antigen [Brugia malayi]
          Length = 548

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 59/281 (20%), Positives = 103/281 (36%), Gaps = 26/281 (9%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV-- 77
           V + GW+HR+R  G  ++F  +RD  G  QV+          A +V +E  + I G +  
Sbjct: 127 VCIKGWIHRMRRQGKSLMFFILRDGTGFLQVLLMDKLCQTYDALTVNTECTVEIYGAIKE 186

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    E  N +      EL A   +I+  A    +      E         R L +R + 
Sbjct: 187 VPEGKEAPNGH------ELIADFWKIIGNAPPGGIDNVLNEEASVDKMLDNRHLVIRGEN 240

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R     +MR       ++E + P L  +  EG           + SF  L Q+
Sbjct: 241 AAALLRLRAAATRAMREHFYNAGYLEVAPPTLVQTQVEGGSTLFNLDYFGEQSF--LTQS 298

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  + +  D +   +     +   S  L  E+  ++ E  F+  DD++  +E ++
Sbjct: 299 SQLYLETCIPTLGDVFLHCSVLQGGKISHSSTL-AEYAHVEAECPFITLDDLMEKIEELV 357

Query: 258 RGVFEEFSNGNTVSN--------------NFLRICYDDAIR 284
               +                         FLR+ Y DAI+
Sbjct: 358 CDTVDRLLADEEAKKLLEHINPKFQPPERPFLRMEYKDAIK 398


>gi|47208664|emb|CAF88671.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 460

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 377 LMPNVGEIVGGSMRIWDSEELLEGYRREGIDP----TPYYWYTDQRKYGTCPHGGYGLGL 432

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           +R +  LL   ++R+V L+P
Sbjct: 433 ERFLTWLLNRHHIRDVCLYP 452


>gi|167948502|ref|ZP_02535576.1| Lysyl-tRNA synthetase class II [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 279

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 81/188 (43%), Gaps = 17/188 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +G  VR++G +   R  G   F  ++D  G  Q+    D+       +   +W +  
Sbjct: 55  LESMGLRVRIAGRLMSRRVMGKASFAHVQDMTGRMQLFVQRDALEEGFYNTQFKKWDI-- 112

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++   AE +     TG++ +  + I +L+ +   PLP        + +R++ R++DL
Sbjct: 113 -GDIIG--AEGVLFKTKTGELSVKVESIRLLTKSLR-PLPEKFHGITDQELRYRQRYVDL 168

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   +   + RT+++  +R  +    F+E  TP++           ++P R +    +
Sbjct: 169 IMNEDSRRTFRIRTQVVQFIRNYLNGRGFMEVETPMMQ----------VIPGRCHGTPLH 218

Query: 193 ALPQAPQQ 200
              Q PQ 
Sbjct: 219 HPAQCPQH 226


>gi|162448262|ref|YP_001621394.1| asparaginyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|189083267|sp|A9NE58|SYN_ACHLI RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|161986369|gb|ABX82018.1| asparaginyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 463

 Score = 39.7 bits (91), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 126/318 (39%), Gaps = 70/318 (22%)

Query: 17  VGSFVRLSGWV--HRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            G  V L GW+  HR +   G I L+    +   QVV       +E A +   +    + 
Sbjct: 16  AGQEVILKGWIRNHRDQKEFGFINLNDGSFFENIQVV-------YERATTKDFD---AVT 65

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            L +  S E I   ++T      +Q  EI ++  E+ L       YP  I+ K    +  
Sbjct: 66  RLSVGASIEVIGTLVLTPD---RSQPFEIKAL--EVRLIGDSGENYP--IQPKRHTREFL 118

Query: 135 RDTLHKNIVKRTRIINSM-RCRMIA----------ENFIECSTPILTASSPEGA------ 177
           R+  H  +  RT + +++ R R IA          ++F+   TPILTA+  EGA      
Sbjct: 119 REVAH--LRPRTNLFSAVFRVRSIAAYAIHKFFQEQDFVYVHTPILTANDGEGAGAMFKV 176

Query: 178 --RDFLVPSRVNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPR 226
              D   P R    S      F+          QL     A  F   +   P FR E+  
Sbjct: 177 TTLDMNKPPRNEDSSIDYSKDFFGREANLTVTGQLEGEAYAHAFRNIYTFGPTFRAENSN 236

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSN------ 266
           +     EF+ ++ E++F + +D +  +E +++ V              F++F        
Sbjct: 237 TTTHASEFWMIEPEIAFADLNDNMELIERMVKYVTSYVLEHAKEEMAFFDKFVEKGLLTK 296

Query: 267 -GNTVSNNFLRICYDDAI 283
             N + ++F RI +++AI
Sbjct: 297 LDNLLKSSFKRITHEEAI 314


>gi|301115242|ref|XP_002905350.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262110139|gb|EEY68191.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 231

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD++  G E+       H  +++++    +G+ +E + N    L    +    PHGG   
Sbjct: 140 YDMMIRGKEMVLCAQHVHDPKLLMERMDELGVPQESMRNYIYSL----RLDSLPHGGGGI 195

Query: 542 GIDRIVMLLLGAKNV 556
           G++R+VML LG  N+
Sbjct: 196 GLERVVMLYLGLGNI 210


>gi|307544318|ref|YP_003896797.1| lysyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307216342|emb|CBV41612.1| lysyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 324

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 14/93 (15%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQ---------AFSNVGISKEVVENRFGGLYRAF 529
           A ++++ C G E+A+G   + +++   Q         A  + G+ +   + R   L  A 
Sbjct: 232 ASRFEVYCRGLELANG--YDELTDAEEQRARFEADQAARRSAGLPEVDSDAR---LVAAL 286

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             GMP   G+A G+DR++ L LG  +V EV  F
Sbjct: 287 ASGMPEGSGVALGLDRLIQLALGKTSVAEVMAF 319


>gi|52425688|ref|YP_088825.1| lysyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81386826|sp|Q65S20|SYK3_MANSM RecName: Full=Uncharacterized protein YjeA
 gi|52307740|gb|AAU38240.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 323

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR------DFLVPSRVNQGSFYA 193
           K +  R +II  +R        +E  TP+L+              +F+ P   N  + + 
Sbjct: 14  KTLFTRAKIIREIRKFFTERGLLEVETPVLSEFGVTDVHLSTFNTEFIAPIGENSKTLW- 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI   FR+E+  S   P EF  L+      +   ++N +
Sbjct: 73  LMTSPEYHMKRLLAAGSGAIFQICRVFRNEEAGSRHNP-EFTMLEWYRPHFDMYRLINEV 131

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 132 DDLLQQILD 140



 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 16/113 (14%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF---------S 509
           F   Q  +  +   D    + F++     G E+A+G   N +++   Q            
Sbjct: 213 FPASQAALAQISSEDHRVAERFEF--YFKGLELANGF--NELTDANEQLIRFERDNRQRE 268

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +G+ +  ++ R   L  A + GMP   G+A G+DR++M  L A  + EV  F
Sbjct: 269 KMGLPQRAIDKR---LLAALEAGMPNCAGVALGVDRLLMAALNANRIEEVMAF 318


>gi|116202689|ref|XP_001227156.1| hypothetical protein CHGG_09229 [Chaetomium globosum CBS 148.51]
 gi|88177747|gb|EAQ85215.1| hypothetical protein CHGG_09229 [Chaetomium globosum CBS 148.51]
          Length = 618

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP GG   GIDR+ M +    ++REV  FP
Sbjct: 553 ALEYGLPPTGGWGLGIDRLTMFITNNYSIREVLAFP 588



 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 112/265 (42%), Gaps = 26/265 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQV-----------VANPDSACFEIAK---SV 65
           +R++G ++  R  G  +IF D+R       +           +   DS      K   ++
Sbjct: 127 IRIAGRIYNKRASGSKLIFYDLRTSADTVSIGTQLQVVCQAQLVKEDSGAPSFEKQHENI 186

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES-- 123
           R   V+ I G     + +   A    G++ + A +I +LS      L +     +P S  
Sbjct: 187 RRGDVIGIVGYAGRTNPKNRLAEGKEGELSIFATEIVLLSPC----LHMLPSVRFPFSDG 242

Query: 124 -IRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             R + R+LD L  D   + + +R+R +  +R  +    FIE  TP++ A +  GA    
Sbjct: 243 EQRARMRYLDMLWNDKSREVLWQRSRAVRYIREYLHERRFIEVETPMMHAIAG-GATALP 301

Query: 182 VPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
             +  N       +  AP+ + + ++   F + F+I   FR+E       P EF   +  
Sbjct: 302 FTTHHNDLDIDMYMRVAPELFLKKMIVGQFGKVFEIGKNFRNEGIDLTHNP-EFTTCEFY 360

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS 265
            ++ +  D++   E+++ G+ ++ +
Sbjct: 361 WAYADMYDLMELTEDLVSGLVKQLT 385


>gi|311281287|ref|YP_003943518.1| lysyl-tRNA synthetase-related protein GenX [Enterobacter cloacae
           SCF1]
 gi|308750482|gb|ADO50234.1| lysyl-tRNA synthetase-related protein GenX [Enterobacter cloacae
           SCF1]
          Length = 325

 Score = 39.7 bits (91), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A Q G+P   G+A G+DR+VML LGA+ + +V  F
Sbjct: 283 LLGALQAGLPDCSGVALGVDRLVMLALGAEQLADVIAF 320



 Score = 37.0 bits (84), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 17/175 (9%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASS-------PEGARDFLVPSRVNQGSFYA 193
           N++KR  I+  +R        +E  TP ++ ++       P   R F+ P   +QG    
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETR-FVGPGH-SQGMNLY 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N +
Sbjct: 73  LMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNP-EFTMLEWYRPHYDMYRLINEV 131

Query: 254 ENVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTE 304
           +++L+ V E + +   +    F R    D +     DKP LR     + + NV E
Sbjct: 132 DDLLQQVLECQPAESLSYQQAFQRHLEIDPL---SADKPQLREAAAKLDLSNVAE 183


>gi|110589282|gb|ABG77150.1| lysyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 283

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 81/188 (43%), Gaps = 17/188 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +G  VR++G +   R  G   F  ++D  G  Q+    D+       +   +W +  
Sbjct: 59  LESMGLRVRIAGRLMSRRVMGKASFAHVQDMTGRMQLFVQRDALEEGFYNTQFKKWDI-- 116

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++   AE +     TG++ +  + I +L+ +   PLP        + +R++ R++DL
Sbjct: 117 -GDIIG--AEGVLFKTKTGELSVKVESIRLLTKSLR-PLPEKFHGITDQELRYRQRYVDL 172

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   +   + RT+++  +R  +    F+E  TP++           ++P R +    +
Sbjct: 173 IMNEDSRRTFRIRTQVVQFIRNYLNGRGFMEVETPMMQ----------VIPGRCHGTPLH 222

Query: 193 ALPQAPQQ 200
              Q PQ 
Sbjct: 223 HPAQCPQH 230


>gi|289807116|ref|ZP_06537745.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 106

 Score = 39.7 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R F+I   FR+E       P EF  +++ M++ +  D++   E++
Sbjct: 15  APELYLKRLVVGGFERVFEINRNFRNEGISVRHNP-EFTMMELYMAYADYKDLIELTESL 73

Query: 257 LRGVFEE 263
            R + ++
Sbjct: 74  FRTLAQD 80


>gi|119475087|ref|ZP_01615440.1| lysyl-tRNA synthetase-related protein [marine gamma proteobacterium
           HTCC2143]
 gi|119451290|gb|EAW32523.1| lysyl-tRNA synthetase-related protein [marine gamma proteobacterium
           HTCC2143]
          Length = 322

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 24/39 (61%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A   G+P   G+A G+DR+VML L  KN+ +V  FP
Sbjct: 280 LLAAMNEGLPSCAGVALGVDRLVMLALQIKNIADVMAFP 318


>gi|18313428|ref|NP_560095.1| asparagine synthetase A [Pyrobaculum aerophilum str. IM2]
 gi|18160962|gb|AAL64277.1| asparaginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 348

 Score = 39.7 bits (91), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 4/116 (3%)

Query: 148 IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I+ ++R  + ++ F+E  +PI+   +  G R     S    G+ Y +  +   YKQ  MA
Sbjct: 50  ILRALREFLDSKGFVEVLSPIIGPVTDPGIRGAKQASIDFYGAEYKVMSSAILYKQY-MA 108

Query: 208 SGFDRYFQIAPCFRDEDPRS---DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
               + + ++P  R E P S    R   EFYQLD+EM      + ++  E+++  V
Sbjct: 109 RVLGKIYFVSPNIRLEPPDSIFTGRHLVEFYQLDLEMYKATYHEAMDLAEDLITYV 164


>gi|327403764|ref|YP_004344602.1| asparaginyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327319272|gb|AEA43764.1| Asparaginyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 483

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 14/81 (17%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVV-----ENRFGGLYRAFQCGMPPHGGIAAGID 544
           E+  G  R    EV+ +  ++ GI +E +       RFG +         PH G   G +
Sbjct: 406 EMVGGSQREERLEVLQKKCADFGIHEEDLWWYLDTRRFGSV---------PHAGFGLGFE 456

Query: 545 RIVMLLLGAKNVREVSLFPMS 565
           R+VM + G  N+R+V  FP +
Sbjct: 457 RMVMFVTGMTNIRDVIPFPRT 477


>gi|262273028|ref|ZP_06050847.1| lysyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262222938|gb|EEY74244.1| lysyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 323

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/128 (21%), Positives = 58/128 (45%), Gaps = 8/128 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR------DFLVPSRVNQGSFYA 193
           + +  R R++N +RC     +  E  TP ++ ++           DF+ P        Y 
Sbjct: 12  ETLKARARLVNDIRCFFAERDVWEVDTPAMSQATVTDVHLHTFKTDFVGPGFAKGIPLYM 71

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  +P+ + + L+A+G    +QI   FR+E+   +  P EF  L+      +   +++ M
Sbjct: 72  M-TSPEFHMKRLLAAGSGAIYQINKAFRNEEAGRNHNP-EFTMLEWYRPGFDHHALMDEM 129

Query: 254 ENVLRGVF 261
           + +L+ V 
Sbjct: 130 DALLQRVL 137


>gi|325474986|gb|EGC78172.1| tRNA synthetase [Treponema denticola F0402]
          Length = 311

 Score = 39.3 bits (90), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 63/160 (39%), Gaps = 17/160 (10%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASS-PEG-----ARDFLVPS---RVNQGSFYALP 195
           R   I + R   I +N++E  TP L+    PE        ++L PS     +QG    L 
Sbjct: 9   RALSIQAAREFFIKKNYLELDTPALSGELIPETCLEVFKTEYLSPSLSKDTHQGKALFLV 68

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ Y + ++A      FQI+ C+R+ +   +    EF  L+         D +   E 
Sbjct: 69  PSPEVYIKPIIAQTSRSVFQISKCYRNAESIGNIHSPEFTMLEYYTVNANYKDSVKISEE 128

Query: 256 VLRGVFEEFSNGNTVSNNFLRI--------CYDDAIRRYG 287
            L  V +       V    L+I          D+A R+Y 
Sbjct: 129 FLTHVSDRVKENPLVDGEVLKILSKGFDCLTMDEAFRKYA 168


>gi|310765345|gb|ADP10295.1| lysyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 325

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 10/91 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------VGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G      S    Q F          G+ ++ ++N    L  A   
Sbjct: 233 AERFEVYFKGIELANGFRELTDSREQRQRFEQDNRKRAAAGLPQQPIDNY---LLEALAG 289

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           GMP   G+A G+DR+VML L A+ + +V  F
Sbjct: 290 GMPDSSGVALGVDRLVMLALKAERLSDVIAF 320


>gi|238918356|ref|YP_002931870.1| lysyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259511522|sp|C5BDL9|SYK3_EDWI9 RecName: Full=Uncharacterized protein YjeA
 gi|238867924|gb|ACR67635.1| putative lysyl-tRNA synthetase-like protein GenX [Edwardsiella
           ictaluri 93-146]
          Length = 325

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 4/79 (5%)

Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           + NGF E+     +    E   +  +  G+ ++ ++     L  A + GMP   G+A G+
Sbjct: 245 LANGFHELTDAAEQRQRFEQDNRKRAAAGLPQQPIDEH---LLAALEHGMPDSSGVALGV 301

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR++ML L A+ + EV  F
Sbjct: 302 DRLIMLALSAERLSEVIAF 320



 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 14/163 (8%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR-------VNQGSFYA 193
           N++KR  I++++R        +E  TP ++ ++       LVP +       V QG    
Sbjct: 15  NLLKRASILSTIRRFFSDRGVLEVDTPSMSQATVTDVH--LVPFQTHFVGPGVAQGMMLY 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +   ++N +
Sbjct: 73  LMTSPEYHMKRLLAAGSGPIYQLCRSFRNEESGRYHNP-EFTMLEWYRPHYDMYRLMNEV 131

Query: 254 ENVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           +++L+ V E E +   +    F+R    D +     DK  LR 
Sbjct: 132 DDLLQQVLECESAETLSYQQAFIRHLDVDPL---SADKTQLRE 171


>gi|270158829|ref|ZP_06187486.1| lysyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289166378|ref|YP_003456516.1| lysyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269990854|gb|EEZ97108.1| lysyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288859551|emb|CBJ13516.1| lysyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 313

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 7/141 (4%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS--RVNQGSFYALPQAPQQY 201
           +R  ++  +R       + E  TPI+      G  D  + +   + +G  Y L  +P+ +
Sbjct: 13  QRAELLKKIRYFFTERGYWEVETPIMARY---GTTDVYLSNIEALFRGETYYLQTSPEYH 69

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+A+G    FQIA  FRD++      P EF  L+     ++   ++  M+  L+ + 
Sbjct: 70  MKRLLAAGSGPIFQIARVFRDDELGRWHNP-EFTLLEWYQLGIDHHTLIGEMDLFLQMIL 128

Query: 262 EEFSN-GNTVSNNFLRICYDD 281
           E       T  + FL  C+ D
Sbjct: 129 ESRPMLKKTYQHAFLEACHID 149


>gi|215447936|ref|ZP_03434688.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289759756|ref|ZP_06519134.1| lysyl-tRNA synthetase 1 lyss [Mycobacterium tuberculosis T85]
 gi|289715320|gb|EFD79332.1| lysyl-tRNA synthetase 1 lyss [Mycobacterium tuberculosis T85]
          Length = 249

 Score = 39.3 bits (90), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 15/93 (16%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQ---------AFSNVGISKEVVENRFGGLYRAFQC 531
           ++DL   G E+A+G   + +S+ ++Q         A +       V++  F     A + 
Sbjct: 157 KWDLYLRGIELATG--YSELSDPVVQRERFADQARAAAAGDDETMVLDEDF---LAALEY 211

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP  G   GIDR++M L G  ++RE  LFP+
Sbjct: 212 GMPPCTGTGMGIDRLLMSLTGL-SIRETVLFPI 243


>gi|154281359|ref|XP_001541492.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150411671|gb|EDN07059.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 569

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +A Q G+PP GG   G+DR+ ML  GA+ + +V  F
Sbjct: 524 QALQWGLPPTGGWGCGVDRLCMLFTGARRIGDVLSF 559


>gi|259907165|ref|YP_002647521.1| lysyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224962787|emb|CAX54242.1| Putative lysyl-tRNA synthetase (Lysine-tRNA ligase) [Erwinia
           pyrifoliae Ep1/96]
 gi|283476972|emb|CAY72856.1| putative lysyl-tRNA synthetase [Erwinia pyrifoliae DSM 12163]
          Length = 325

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 10/91 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------VGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G      S    Q F          G+ ++ ++N    L  A   
Sbjct: 233 AERFEVYFKGIELANGFHELTDSREQRQRFEQDNRKRAAAGLPQQPIDNY---LLEALAG 289

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           GMP   G+A G+DR+VML L A+ + +V  F
Sbjct: 290 GMPDSSGVALGVDRLVMLALKAERLSDVIAF 320


>gi|242007517|ref|XP_002424586.1| hypothetical protein Phum_PHUM137280 [Pediculus humanus corporis]
 gi|212508029|gb|EEB11848.1| hypothetical protein Phum_PHUM137280 [Pediculus humanus corporis]
          Length = 209

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 14/100 (14%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+CG+L    +G  + L GW+   +  G  I   ++D YG  ++V             
Sbjct: 104 RSHTCGELNKYLIGKNITLCGWISSNKFPGRAI---LKDGYGFVEIVP-----------E 149

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL 104
           ++ E +L + G+V S+     N       IE+  Q + ++
Sbjct: 150 LKLENILVVHGVVSSQKENNPNTKNKNENIEVLVQSLTVV 189


>gi|45190553|ref|NP_984807.1| AEL054Cp [Ashbya gossypii ATCC 10895]
 gi|44983495|gb|AAS52631.1| AEL054Cp [Ashbya gossypii ATCC 10895]
          Length = 477

 Score = 39.3 bits (90), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 7/108 (6%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPS---RVNQGSFY---ALPQA 197
           R+ I  ++   +  E   +   P++T+   EGA + F V +   R +Q  ++   A    
Sbjct: 154 RSHIEATLTQILTQEGIYKVPPPVVTSGDCEGAGELFHVEANSLRASQRKYFGTNAYLTV 213

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q    ++A    R + + PCFR E+  + R   EF+ L+ E+ FV+
Sbjct: 214 SAQMHLEVIALALGRVWALTPCFRAEESDTSRHLSEFWMLEAELCFVQ 261


>gi|7437576|pir||S70779 asparagine-tRNA ligase (EC 6.1.1.22) - Xenorhabdus nematophilus
           (fragment)
          Length = 192

 Score = 39.3 bits (90), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 7/93 (7%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +++ +    +G++KE         YR  +  G  PH G  
Sbjct: 100 DVLAPGIGEIIGGSQREERLDMLDKRLEEMGLNKEDY-----WWYRDLRRYGTVPHAGFG 154

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLM 573
            G +R+V  + G  NVR+V  FP +      LM
Sbjct: 155 LGFERLVAYVTGVANVRDVIPFPRTPRNATFLM 187


>gi|302773353|ref|XP_002970094.1| hypothetical protein SELMODRAFT_92995 [Selaginella moellendorffii]
 gi|300162605|gb|EFJ29218.1| hypothetical protein SELMODRAFT_92995 [Selaginella moellendorffii]
          Length = 563

 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 12/171 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPH--GGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           D G   +G  VR+ GWV   R H  G + FL++ D      +    +      A+ + + 
Sbjct: 31  DGGAGLLGHNVRVGGWVKTGRSHEKGRLTFLELNDGSCPANLQVIVEDTVTPDAQLIYTG 90

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             L ++G  +++  ET        ++EL AQK+  +   +    P+   R   E +R   
Sbjct: 91  TCLVVEG-ELTQPPETAKKQ----KVELRAQKVLEVGPVDASKYPIAKGRHTLEFLR--- 142

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGA 177
             + LR  T   + V R R   +       +   F+   TPI+T S  EGA
Sbjct: 143 NLMHLRSRTNTISSVARIRNALAFATHTFFQQNRFVYVHTPIITTSDCEGA 193


>gi|253991217|ref|YP_003042573.1| lysyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253782667|emb|CAQ85831.1| putative lysyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 342

 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 68/143 (47%), Gaps = 9/143 (6%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR------DFLVPSRVNQGSFYAL 194
           N++KR  I+  +R        +E  TP ++ S+           +F+ P   +  + Y L
Sbjct: 32  NLLKRATILAEIRRFFADRGVLEVETPAMSQSTVTDIHLFPFQTEFVGPGASDGMTLY-L 90

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q++ CFR+E+      P EF  L+      +   ++N ++
Sbjct: 91  MTSPEYHMKRLLAAGSGSIYQLSRCFRNEEAGRYHNP-EFTMLEWYRPHYDMYRLINEVD 149

Query: 255 NVLRGVFE-EFSNGNTVSNNFLR 276
           ++L+ + + E +   +    FLR
Sbjct: 150 DLLQQILDCESAELLSYQQAFLR 172



 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 4/52 (7%)

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + V EN  G L    + GMP   G+A G+DR+VML L A+ + +V  F +++
Sbjct: 294 RPVDENLIGAL----KQGMPECAGVALGVDRLVMLALAAEKLSDVIAFSVNK 341


>gi|302807108|ref|XP_002985285.1| hypothetical protein SELMODRAFT_121831 [Selaginella moellendorffii]
 gi|300147113|gb|EFJ13779.1| hypothetical protein SELMODRAFT_121831 [Selaginella moellendorffii]
          Length = 563

 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 12/171 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPH--GGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           D G   +G  VR+ GWV   R H  G + FL++ D      +    +      A+ + + 
Sbjct: 31  DGGAGLLGHNVRVGGWVKTGRSHEKGRLTFLELNDGSCPANLQVIVEDTVTPDAQLIYTG 90

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             L ++G  +++  ET        ++EL AQK+  +   +    P+   R   E +R   
Sbjct: 91  TCLVVEG-ELTQPPETAKKQ----KVELRAQKVLEVGPVDASKYPIAKGRHTLEFLR--- 142

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGA 177
             + LR  T   + V R R   +       +   F+   TPI+T S  EGA
Sbjct: 143 NLMHLRSRTNTISSVARIRNALAFATHTFFQQNRFVYVHTPIITTSDCEGA 193


>gi|195161004|ref|XP_002021360.1| GL24844 [Drosophila persimilis]
 gi|194118473|gb|EDW40516.1| GL24844 [Drosophila persimilis]
          Length = 507

 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 12/90 (13%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGI 539
           L+ N  EI  G +R   SE +L  +   GI         + R  G          PHGG 
Sbjct: 424 LLPNVGEIVGGSMRIWDSEELLNGYKREGIDPTPYYWYTDQRIYGTI--------PHGGY 475

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G++R +  LL   ++REV L+P   + C
Sbjct: 476 GLGLERFLCWLLNRYHIREVCLYPRFLDRC 505


>gi|156095556|ref|XP_001613813.1| asparagine-tRNA ligase [Plasmodium vivax SaI-1]
 gi|148802687|gb|EDL44086.1| asparagine-tRNA ligase, putative [Plasmodium vivax]
          Length = 1047

 Score = 39.3 bits (90), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 32/53 (60%)

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +G    L Q+PQ YKQ+L+ + F+R +++   +R+E   + R   EF  LD+E
Sbjct: 558 EGEKLILAQSPQFYKQMLINADFERVYEMNYSYRNERFHTSRHLNEFLSLDIE 610


>gi|297568252|ref|YP_003689596.1| tRNA synthetase class II (D K and N) [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924167|gb|ADH84977.1| tRNA synthetase class II (D K and N) [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 294

 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 32/166 (19%)

Query: 160 NFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
           +F+E  TP++  A +PE     L+P    +   + L  +P+   + L+A G  + FQI  
Sbjct: 22  DFLEVETPLMIPAPAPE---PHLLPQPAGR---WFLQTSPELCMKRLLARGHAKIFQICK 75

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS----NGN------ 268
           CFR ++ R  R   EF  L+   +  +   +++  E +L  V  E +    NG+      
Sbjct: 76  CFRRQE-RGRRHVPEFTMLEWYRAGADYLALMDDCEQLLTAVAAELALPGENGHQVSLVL 134

Query: 269 -----TVSNNFLRIC---YDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
                TV+  F R      D+A+RR      DL + +++  +  H 
Sbjct: 135 PWERLTVAEAFCRYAAMEVDEALRR------DLFDQLLVEKIEPHL 174



 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 23/32 (71%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            MP   GIA G+DR+VM++LG +N+ +V  FP
Sbjct: 259 AMPQAAGIALGLDRLVMIMLGKENIDQVLAFP 290


>gi|317493558|ref|ZP_07951979.1| tRNA synthetase class II [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918501|gb|EFV39839.1| tRNA synthetase class II [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 325

 Score = 39.3 bits (90), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 27/42 (64%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A + G+P   G+A G+DR++ML L A+ + EV  FP+ +
Sbjct: 283 LLAALEHGLPDCSGVALGVDRLIMLALKAERLSEVIAFPVDR 324


>gi|320540950|ref|ZP_08040431.1| putative predicted lysyl-tRNA synthetase [Serratia symbiotica str.
           Tucson]
 gi|320028987|gb|EFW11185.1| putative predicted lysyl-tRNA synthetase [Serratia symbiotica str.
           Tucson]
          Length = 301

 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           + NGF E+  G  +    E   +  +  G+ +  ++N    L  A Q G+P   G+A G+
Sbjct: 235 LANGFRELTDGSEQRQRFEQDNRKRAQRGLPQHPIDN---NLLDALQHGIPACSGVALGV 291

Query: 544 DRIVMLLLGA 553
           DR+VML LGA
Sbjct: 292 DRLVMLALGA 301


>gi|119946883|ref|YP_944563.1| lysyl-tRNA synthetase-related protein GenX [Psychromonas ingrahamii
           37]
 gi|119865487|gb|ABM04964.1| lysyl-tRNA synthetase-related protein GenX [Psychromonas ingrahamii
           37]
          Length = 326

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 13/156 (8%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----------NQ 188
           K + +R +I+ ++R   I    +E  TPIL+ +       F   +              Q
Sbjct: 10  KELKQRAKILQAIRHFFITRGLLEVETPILSQAGVTDIHLFCFQTHFMGPQISSSKPEAQ 69

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G+   L  +P+ + + L+++G    FQI+  FR+E+      P EF  L+      +   
Sbjct: 70  GTPLYLQTSPEFHMKRLLSAGSGCIFQISKVFRNEESGRFHNP-EFTLLEWYRVGFDHFR 128

Query: 249 ILNTMENVLRGVFE-EFSNGNTVSNNFLRICYDDAI 283
           +++ M+ +L+ + + E +   T  N FL +   D +
Sbjct: 129 LMDEMDQLLQFILKSETARRCTYQNAFLEVLAVDPL 164


>gi|258545301|ref|ZP_05705535.1| lysyl-tRNA synthetase family protein GenX [Cardiobacterium hominis
           ATCC 15826]
 gi|258519404|gb|EEV88263.1| lysyl-tRNA synthetase family protein GenX [Cardiobacterium hominis
           ATCC 15826]
          Length = 303

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 10/91 (10%)

Query: 478 KAFQYDLVCNGFEIASG-----GIRNHMSEVML--QAFSNVGISKEVVENRFGGLYRAFQ 530
           KA +++L  NG E+ +G       R   +  +      + +G+ +  ++  F     A +
Sbjct: 214 KAARFELYINGLELCNGFWELSDAREQRARFLADNSERAQLGLPEMPLDEAF---LAALE 270

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
            G+P   G+A G+DR++ML  GA ++ EV L
Sbjct: 271 RGLPDSAGVALGVDRLLMLACGAAHIDEVML 301


>gi|118580184|ref|YP_901434.1| tRNA synthetase, class II (D, K and N) [Pelobacter propionicus DSM
           2379]
 gi|118502894|gb|ABK99376.1| tRNA synthetase, class II (D, K and N) [Pelobacter propionicus DSM
           2379]
          Length = 301

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           N+  R  I+ ++R    +  F+E  TP ++ A++PE   +++ P     G  Y L  +P+
Sbjct: 7   NLYLRADIVAAIRSFFASRRFLEVDTPHLIPANAPE---EYIDPH--GSGDRY-LHTSPE 60

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+  G +R FQI  C+R ++  S  LP EF  L+      +   ++   + +LR 
Sbjct: 61  ICMKRLLCRGHERIFQICRCWRRDERGSRHLP-EFAMLEWYRRDSDYRQLMEDCQELLRW 119

Query: 260 V 260
           V
Sbjct: 120 V 120


>gi|300776373|ref|ZP_07086231.1| asparagine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300501883|gb|EFK33023.1| asparagine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 482

 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 108/265 (40%), Gaps = 35/265 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + + GWV   R +    F+ + D   I   Q+V + ++    I K++ +   L + G V+
Sbjct: 21  ITVYGWVRSFRANR---FIALNDGSTINNLQIVVDFENFDEAIIKNISTASSLKVVGEVV 77

Query: 79  SRSAETINANIITGQ-IELSAQKIEIL--SVAEELPLPVFGEREYP-ESIRFKYRFLDLR 134
                        GQ +E+ A+KI IL  +  EEL   +   +++  E +R +   L  R
Sbjct: 78  ESQG--------AGQSVEIIAKKIIILGDNFTEELQSTILQPKKHSLEKLR-EQAHLRFR 128

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS--------RV 186
            +        R  +  ++        F   +TP++T +  EGA +    +        R 
Sbjct: 129 TNLFGAVFRVRHAVSFAVHSFFNQNQFFYINTPVITGADAEGAGEMFGVTNFDLNNMPRT 188

Query: 187 NQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +G       F+          QL     A G  R +   P FR E+  + R   EF+ +
Sbjct: 189 EEGEIDFAQDFFGRKTNLTVSGQLEGETAAMGLGRIYTFGPTFRAENSNTTRHLAEFWMI 248

Query: 238 DMEMSFVEQDDILNTMENVLRGVFE 262
           + E++F   +D ++  E+ L+ V +
Sbjct: 249 EPEVAFNNLEDNIDLAEDFLKYVIQ 273


>gi|325115894|emb|CBZ51448.1| Lysyl-tRNA synthetase, related [Neospora caninum Liverpool]
          Length = 2547

 Score = 38.9 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/40 (40%), Positives = 25/40 (62%)

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            A   G+PP  G+  G+DR+VMLL  A  +R+V   P+ ++
Sbjct: 2506 ALMLGLPPTAGLGIGLDRLVMLLTDAPLIRDVVHMPLRKS 2545


>gi|242786063|ref|XP_002480728.1| asparaginyl-tRNA synthetase Slm5, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218720875|gb|EED20294.1| asparaginyl-tRNA synthetase Slm5, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 565

 Score = 38.9 bits (89), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 107/281 (38%), Gaps = 70/281 (24%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSAC---FEIAKSVRSEWVLCIDG 75
           V L G+V  VR      F +I D   +   Q +  P+ A       A  +   W  C  G
Sbjct: 59  VTLKGFVRSVRKQKRFAFAEISDGSTVKSLQAILTPEQAADLSTGTAIEISGRWKACPAG 118

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES--IRFKYRFLDL 133
              +               EL   K++I+  A+            PE+  I+ KY   D 
Sbjct: 119 KEQTH--------------ELQTSKVKIVGYAD------------PETYLIQKKYHSPDF 152

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN---------------FIECSTPILTASSPEGAR 178
            R   H  +  RT   NS+  R  +E                F++   P++T+S  EGA 
Sbjct: 153 LRQIPHLRL--RT-PFNSLLSRFRSETIYQLGQVFRSVPQGGFVQVQPPLITSSDCEGAG 209

Query: 179 DFLV--------PSRVNQGS-------FYALPQAPQQYKQLLM---ASGFDRYFQIAPCF 220
           +           P   ++GS       F+  P+      QL +   A+     + ++P F
Sbjct: 210 ETFTLSPQSSAPPPSGSKGSEDEEHLHFFRSPKYLTVSSQLHLEAYAAELGNVWALSPTF 269

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGV 260
           R E  ++ R   EFY L+ E++F +    +L+ +E ++R +
Sbjct: 270 RAEKSKTPRHLSEFYMLEAEVNFTDDLPALLDLVEYLIRDL 310


>gi|261344987|ref|ZP_05972631.1| lysyl-tRNA synthetase [Providencia rustigianii DSM 4541]
 gi|282567132|gb|EFB72667.1| lysyl-tRNA synthetase [Providencia rustigianii DSM 4541]
          Length = 325

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 27/41 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           L  A + G+P   G+A G+DR++ML L A+ + +V  FP++
Sbjct: 283 LLAALEHGLPDCSGVAVGVDRLMMLALNAERISDVIAFPVT 323


>gi|90413347|ref|ZP_01221340.1| lysyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90325589|gb|EAS42058.1| lysyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 323

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 28/129 (21%), Positives = 61/129 (47%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR------DFLVPSRVNQGSFYA 193
           K + +R  +++S+R     +  IE  TP ++ ++           +F+ P      + Y 
Sbjct: 12  KQLKQRAAVLSSIRNFFAGKGVIEVDTPAMSQATVTDVHLHTFQTEFVGPGFAGGQTLYM 71

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  +P+ + + L+++G    +QI   FR+E+      P EF  L+      +  D++N M
Sbjct: 72  M-TSPEFHMKRLLSAGSGPIYQICKSFRNEESGRYHNP-EFTMLEWYRPDFDHHDLMNEM 129

Query: 254 ENVLRGVFE 262
           + +L+ V +
Sbjct: 130 DELLQLVLQ 138



 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 25/40 (62%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           L  A + G P   G+A GIDR++ML L   ++ +V+ FP+
Sbjct: 281 LIEALRAGFPDCAGVALGIDRLIMLALKLDHIDQVTAFPI 320


>gi|295098318|emb|CBK87408.1| lysyl-tRNA synthetase-related protein GenX [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 325

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 26/38 (68%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + G+P   G+A G+DR+VML LGA+++ +V  F
Sbjct: 283 LLEALKAGLPDCSGVALGVDRLVMLALGAEHLGDVIAF 320


>gi|42527784|ref|NP_972882.1| tRNA synthetase, class II family protein [Treponema denticola ATCC
           35405]
 gi|41818612|gb|AAS12801.1| tRNA synthetase, class II family protein [Treponema denticola ATCC
           35405]
          Length = 345

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 17/160 (10%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASS-PEG-----ARDFLVPSRVNQ---GSFYALP 195
           R   I + R   I +N++E  TP L+    PE        ++L PS + +   G    L 
Sbjct: 9   RALSIQAAREFFIKKNYLELDTPALSGELIPETCLEVFKTEYLSPSLLKKSPTGKALFLV 68

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ Y + ++A      FQI+ C+R+ +   +    EF  L+         D +   E 
Sbjct: 69  PSPEVYIKPIIAQTSRSVFQISKCYRNAESIGNIHSPEFTMLEYYTVNANYKDSVKISEE 128

Query: 256 VLRGVFEEFSNG--------NTVSNNFLRICYDDAIRRYG 287
            L  V +              T+S  F  +  D+A R+Y 
Sbjct: 129 FLSHVSDRVKENPLVDREVLKTLSKGFECLTMDEAFRKYA 168


>gi|290475153|ref|YP_003468039.1| putative Lysine--tRNA ligase [Xenorhabdus bovienii SS-2004]
 gi|289174472|emb|CBJ81266.1| putative Lysine--tRNA ligase [Xenorhabdus bovienii SS-2004]
          Length = 295

 Score = 38.9 bits (89), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 17/134 (12%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR---VNQGSFYAL 194
           L+  I+ +  +I  +R  + ++ FIE  TP++   S + +R  L       + + S +AL
Sbjct: 2   LNSPILYKAAMIRRIRTFLDSQKFIEIMTPVMRRYSGDDSRPRLSLHNGGWLRESSAFAL 61

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
               Q Y         DR ++I P FR +      LP EF  LD+     ++D  L+ M 
Sbjct: 62  RYNLQFY---------DRIYEIGPSFRPDTVDDTHLP-EFTMLDL----YKKDSTLDEML 107

Query: 255 NVLRGVFEEFSNGN 268
            + + + E F  G 
Sbjct: 108 QLAQSIIEIFYQGK 121


>gi|269137698|ref|YP_003294398.1| lysyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267983358|gb|ACY83187.1| lysyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304557753|gb|ADM40417.1| lysyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 325

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 24/38 (63%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + GMP   G+A G+DR++ML L A+ + EV  F
Sbjct: 283 LLAALEHGMPDSSGVALGVDRLIMLALSAERLSEVIAF 320



 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 17/169 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR-------VNQGSFYA 193
           N++KR  I++++R        +E  TP ++ ++       LVP +       V QG    
Sbjct: 15  NLLKRASILSTIRRFFSDRGVLEVDTPSMSQATVTDVH--LVPFQTHFVGPGVAQGMTLY 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +   ++N +
Sbjct: 73  LMTSPEYHMKRLLAAGSGPIYQLCRSFRNEESGRYHNP-EFTMLEWYRPHYDMYRLMNEV 131

Query: 254 ENVLRGVFE-EFSNGNTVSNNFLR------ICYDDAIRRYGTDKPDLRN 295
           +++L+ V E E +   +    F+R      +  D    R    K DL N
Sbjct: 132 DDLLQQVLECESAETLSYQQAFIRHLDVDPLSADKTQLREAAAKLDLSN 180


>gi|126460216|ref|YP_001056494.1| asparagine synthetase A [Pyrobaculum calidifontis JCM 11548]
 gi|126249937|gb|ABO09028.1| aspartate-ammonia ligase [Pyrobaculum calidifontis JCM 11548]
          Length = 369

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 25/193 (12%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           E +R+ +R+    RD  ++ + K +  I+  +R  + +  F+E   P++   +  G R  
Sbjct: 48  EFLRYSWRWA---RDEKYQTVFKIQAGILRGIREFLDSRGFVEVLAPVIGPVTDPGIRGA 104

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS---DRLPGEFYQL 237
              S    G  Y +  +   YKQ  MAS   + + ++P  R E   S    R   EFYQ+
Sbjct: 105 RQASIDFYGVEYKVMSSAILYKQY-MASALGKIYFVSPNVRLEPVESIYTGRHLVEFYQV 163

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EM      D +   E+++  V             ++R  Y   +   G + P+ + P 
Sbjct: 164 DIEMYKATYYDAMALAEDLVYHV-----------AKYVREEYWRELEALGRELPEFKRPF 212

Query: 298 IMHNVTEHFVHSE 310
                 + + H+E
Sbjct: 213 ------KRYAHAE 219


>gi|327399624|ref|YP_004340493.1| Lysine--tRNA ligase [Hippea maritima DSM 10411]
 gi|327182253|gb|AEA34434.1| Lysine--tRNA ligase [Hippea maritima DSM 10411]
          Length = 339

 Score = 38.9 bits (89), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 10/74 (13%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A +++L   G E+A+     + S  + + F    IS             A + G+PP  G
Sbjct: 271 AKRFELYIAGIELANCYDEENNSNEIRKRFKKNDIS----------FIEALEFGIPPSSG 320

Query: 539 IAAGIDRIVMLLLG 552
           IA GIDR++M+LL 
Sbjct: 321 IAVGIDRLIMILLN 334


>gi|329296400|ref|ZP_08253736.1| poxB regulator PoxA [Plautia stali symbiont]
          Length = 325

 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 26/43 (60%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           L  A   GMP   G+A G+DR++ML L A  + EV  FP+ ++
Sbjct: 283 LLDALAHGMPACSGVALGVDRLIMLALKADALSEVIAFPVDRS 325



 Score = 38.5 bits (88), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 14/163 (8%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASS-------PEGARDFLVPSRVNQGSFYA 193
           N++KR  I+  +R        +E  TP ++ ++       P   R F+ P   +    + 
Sbjct: 15  NLLKRAAILAEIRRFFADRGVLEVDTPAMSQATITDIHLVPFQTR-FVGPGAADGRDLW- 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    +Q+  CFR+E+      P EF  L+      +   ++N +
Sbjct: 73  LMTSPEYHMKRLLAAGSGPIYQMGRCFRNEEAGRHHNP-EFTMLEWYRPHYDMYRLMNEV 131

Query: 254 ENVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           +++L+ V E + +   +    F+R    D +     DK  LR 
Sbjct: 132 DDLLQQVLECDSAESLSYQQAFIRHLEIDPL---SADKAQLRE 171


>gi|146298346|ref|YP_001192937.1| asparaginyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|146152764|gb|ABQ03618.1| asparaginyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 481

 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 10/79 (12%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC---GMPPHGGIAAGIDRI 546
           EI  G  R    +V+++    +GI KE        LY        G   H G   G +R+
Sbjct: 404 EIVGGSEREERYDVLVEKMEKLGIDKE-------ELYWYLDTRRFGSATHAGFGLGFERL 456

Query: 547 VMLLLGAKNVREVSLFPMS 565
           V+ + G  N+R+V  FP +
Sbjct: 457 VLFVTGMTNIRDVIPFPRT 475


>gi|213861682|ref|ZP_03386152.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
          Length = 85

 Score = 38.9 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R F+I   FR+E       P EF  +++ M++ +  D++   E++
Sbjct: 23  APELYLKRLVVGGFERVFEINRNFRNEGISVRHNP-EFTMMELYMAYADYKDLIELTESL 81

Query: 257 LR 258
            R
Sbjct: 82  FR 83


>gi|85057951|ref|YP_456867.1| asparaginyl-tRNA synthetase [Aster yellows witches'-broom
           phytoplasma AYWB]
 gi|123766348|sp|Q2NIF5|SYN_AYWBP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|84790056|gb|ABC65788.1| aspartyl/asparaginyl-tRNA synthetase [Aster yellows witches'-broom
           phytoplasma AYWB]
          Length = 503

 Score = 38.9 bits (89), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 73/370 (19%), Positives = 123/370 (33%), Gaps = 96/370 (25%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS------------- 67
           + L+GWV   R    +IF+D+ D       + N    C EI K++ +             
Sbjct: 20  ILLNGWVRNCRYQKKLIFIDLND----GTFLENLQIVCKEI-KNIETADINEFQENQKFN 74

Query: 68  -----------EWVLCIDGLVMSRSAETI--NANIITGQIELSAQKIEILSVAEELPLPV 114
                      E +  I  +  S   E I    N +    E+SAQ I +L  ++    P+
Sbjct: 75  NNNKSSNNINLEKLKEILQIGASLQVEGILKATNNLKTPFEISAQNISLLGTSD-FSYPL 133

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
             ++     +R +   L +R          R     ++      + F   +TPI+T +  
Sbjct: 134 QPKKHSKVFLR-QISHLRVRTKLFGAVFRIRNTAFFALHSFFQKKGFFHINTPIITPNDG 192

Query: 175 EGARDFLVPSRVNQGSFYALPQA---PQQYKQL--------------------------- 204
           EG  +    + +N      LPQ    P  +K +                           
Sbjct: 193 EGVGELFQITTLN---LEVLPQTKNIPNAFKPVNENTSKKGIDYKKDFFGKKVFLTVTGQ 249

Query: 205 ----LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR-- 258
                MA G ++ +   P FR E   + R   EF+ L+ EM+F +    L   + +L+  
Sbjct: 250 LEAEAMALGLNKVYTFGPTFRSEKSNTTRHAAEFWMLEPEMAFCDLSQNLKVAQEMLQFV 309

Query: 259 ---------------------GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
                                G+ EE  N       FL + Y+ A+           NP+
Sbjct: 310 ISKCLEQNYQDIEFLDKTEKNGLIEELQNI-AEEKEFLTVKYEQALEILQKSNTKFENPL 368

Query: 298 I--MHNVTEH 305
              +   TEH
Sbjct: 369 FYGVDLATEH 378


>gi|260599492|ref|YP_003212063.1| poxB regulator PoxA [Cronobacter turicensis z3032]
 gi|260218669|emb|CBA34009.1| Putative lysyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 325

 Score = 38.9 bits (89), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 26/38 (68%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + G+P   G+A G+DR++ML LGA+++ +V  F
Sbjct: 283 LLEALKAGLPDCSGVALGVDRLIMLALGAESLADVIAF 320


>gi|301096918|ref|XP_002897555.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262107015|gb|EEY65067.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 388

 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD++  G E+       H  +++++    +G  +E + N    L    +    PHGG   
Sbjct: 303 YDMMIRGEEMVLCAQHVHDPKLLMERMDELGAPQESIRNYIYYL----RLDSLPHGGGGI 358

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G++R+VML     N+ + S+FP
Sbjct: 359 GLERVVMLYFCLGNICKSSMFP 380


>gi|332664342|ref|YP_004447130.1| asparaginyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332333156|gb|AEE50257.1| Asparaginyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 477

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 106/270 (39%), Gaps = 47/270 (17%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG-LVMS 79
           + + GWV   R +  I   D    + + Q+V + +     I K ++    L I G LV S
Sbjct: 19  ITVMGWVRAFRGNRFIALNDGSTPHTL-QIVLDAEKIDETIIKKIKFHACLSITGQLVAS 77

Query: 80  RSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYP-----ESIRFKYRFLDL 133
           + A         GQ +E+ A+ IE+L        P  G    P     E +R    F  +
Sbjct: 78  QGA---------GQAVEILAESIEVLGECN----PEDGYMMQPKVQTMEFLRTNAHF-RM 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL--------VPSR 185
           R +T       R  I  ++        F    TPI+T S  EGA +           P R
Sbjct: 124 RTNTFSSVFRLRHAIAFAVHKFYNDRGFFYIHTPIITGSDAEGAGEMFHVTTLDTNSPPR 183

Query: 186 VNQGS------FYALPQAPQQYKQL---LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           +  GS      F+          QL   + A    + +   P FR E+  + R   EF+ 
Sbjct: 184 LEDGSVDYTQDFFGKATNLTVSGQLQGEIAALALGKIYTFGPTFRAENSNTPRHLAEFWM 243

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           ++ E++F   +DI++ M+     + EEF+ 
Sbjct: 244 IEPEVAF---NDIVDNMD-----LAEEFTK 265



 Score = 38.5 bits (88), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 14/81 (17%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKE-----VVENRFGGLYRAFQCGMPPHGGIAAGID 544
           E+  G  R    +++++    +GI++E     +   +FGG          PH G   G +
Sbjct: 400 EVIGGSQREDRHDLLVERIKAIGIAEEELWWYLQLRKFGG---------APHAGFGLGFE 450

Query: 545 RIVMLLLGAKNVREVSLFPMS 565
           R+V  + G  N+R+V  FP +
Sbjct: 451 RMVQFITGMSNIRDVIAFPRT 471


>gi|326427598|gb|EGD73168.1| asparaginyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 506

 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 100/277 (36%), Gaps = 74/277 (26%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGIT----QVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           GW+  +R    + F  + D  G T    QVV +P     E A+ +     + + G     
Sbjct: 32  GWLKSLRRQKRVAFAALTD--GTTARPLQVVLSP-----ETAEHLNVGSAVEVSG----- 79

Query: 81  SAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
              T+  +   GQ +EL A  + ++   +    PV G     E +R     + +R  TL 
Sbjct: 80  ---TLAESPGKGQALELQAANVSVIGDCDTASYPVQGRDASAEFLR-TIPHMRMRTSTLA 135

Query: 140 KNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFLV---------------P 183
             +  R+  +  +  R+ AE +F    TPILT++  EG  D                  P
Sbjct: 136 AALRVRS-CLTQLTHRIFAEWDFASVHTPILTSNDCEGGGDVFSVTAPHHHHRHSESSQP 194

Query: 184 S-------------RVNQGSF-----------------------YALPQAPQQYKQLLMA 207
           S             R N+ S                        + L  + Q + + +  
Sbjct: 195 SDGTSDSTGTGGRLRSNRNSGNSGNGSEADDAAAVTTAGLFSRPFHLTVSGQLHAEAIAC 254

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             + R +   P FR E+  + R   EFY L+ EM+F 
Sbjct: 255 GAYPRVYTFGPTFRAENSHTPRHLAEFYMLEAEMAFA 291



 Score = 37.0 bits (84), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 10/117 (8%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNH-MSEVMLQAFSNVGIS 514
            PF M Q      +G  + +      DL+  G  E+  G  R H +  +       +G +
Sbjct: 398 KPFYMLQDDSPPSQGATVAAA-----DLIVPGIGELTGGSAREHRLDHLHANITEQLGAA 452

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
                  +  L R    G  PH G   G +R+++ + G KNVR+V  FP     C L
Sbjct: 453 AAADLEWYLDLRR---FGSVPHAGFGLGFERLLLAVTGLKNVRDVIPFPRHPGVCYL 506


>gi|322419667|ref|YP_004198890.1| lysyl-tRNA synthetase-like protein GenX [Geobacter sp. M18]
 gi|320126054|gb|ADW13614.1| lysyl-tRNA synthetase-related protein GenX [Geobacter sp. M18]
          Length = 303

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 8/100 (8%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQAP 198
           + + +R  I N +R     + ++E  TP  + A +PE   D  +PS    G F  +  +P
Sbjct: 12  QALAQRGAIFNRVRAFFQEKGYLEVETPFRIPAPAPEAQID-AIPS---DGWF--MQTSP 65

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +   + L+A+G+ R FQI  C+R+ + R  R   EF  L+
Sbjct: 66  ELCMKRLLAAGYPRIFQICRCWRNGE-RGSRHLSEFTMLE 104



 Score = 37.4 bits (85), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 23/32 (71%)

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            GMP   GIA G+DR+VM+LL A+++ +V  F
Sbjct: 267 AGMPEAAGIALGLDRLVMVLLDAESIDDVVAF 298


>gi|242237924|ref|YP_002986105.1| lysyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242129981|gb|ACS84283.1| lysyl-tRNA synthetase-related protein GenX [Dickeya dadantii
           Ech703]
          Length = 325

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A   G+PP  G+A G+DR++ML L A+++ +V  F
Sbjct: 283 LLSALSAGIPPCSGVALGVDRLIMLALNAESIGDVIAF 320


>gi|227326231|ref|ZP_03830255.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 325

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 14/163 (8%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASS-------PEGARDFLVPSRVNQGSFYA 193
           N++KR  II ++R        +E  TP ++ ++       P   R F+ P   +  + Y 
Sbjct: 15  NLLKRASIIAAVRRFFTDRGVLEVETPAMSQATVTDVFLYPFQTR-FVGPGAADGMTLY- 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N +
Sbjct: 73  LMTSPEYHMKRLLAAGSGPIFQLCRSFRNEESGRHHNP-EFTMLEWYRPHYDMYRLMNEV 131

Query: 254 ENVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           +++L+ V + E +   +    FLR    D +     DK  LR 
Sbjct: 132 DDLLQQVLDCESAEMLSYQQAFLRHLEIDPL---SVDKAQLRE 171


>gi|227113808|ref|ZP_03827464.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 325

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 14/163 (8%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASS-------PEGARDFLVPSRVNQGSFYA 193
           N++KR  II ++R        +E  TP ++ ++       P   R F+ P   +  + Y 
Sbjct: 15  NLLKRASIIAAVRRFFTDRGVLEVETPAMSQATVTDIFLYPFQTR-FVGPGAADGMTLY- 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N +
Sbjct: 73  LMTSPEYHMKRLLAAGSGPIFQLCRSFRNEESGRHHNP-EFTMLEWYRPHYDMYRLMNEV 131

Query: 254 ENVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           +++L+ V + E +   +    FLR    D +     DK  LR 
Sbjct: 132 DDLLQQVLDCESAEMLSYQQAFLRHLEIDPL---SVDKAQLRE 171


>gi|261342821|ref|ZP_05970679.1| lysyl-tRNA synthetase [Enterobacter cancerogenus ATCC 35316]
 gi|288314863|gb|EFC53801.1| lysyl-tRNA synthetase [Enterobacter cancerogenus ATCC 35316]
          Length = 325

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + G+P   G+A G+DR+VML LGA+ + +V  F
Sbjct: 283 LLEALKAGLPDCSGVALGVDRLVMLALGAEQLGDVIAF 320


>gi|261211221|ref|ZP_05925510.1| lysyl-tRNA synthetase-related protein [Vibrio sp. RC341]
 gi|260839722|gb|EEX66333.1| lysyl-tRNA synthetase-related protein [Vibrio sp. RC341]
          Length = 349

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 25/39 (64%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L  A + G+P   G+A GIDR++ML L   ++ +V+ FP
Sbjct: 307 LIAALEAGLPECAGVALGIDRLIMLALDEDHIDKVTAFP 345


>gi|238784785|ref|ZP_04628787.1| lysyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238714298|gb|EEQ06308.1| lysyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 340

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 4/91 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE---VVENRFG-GLYRAFQCGMP 534
           A ++++   G E+A+G       +  LQ F     S+    + +N     L  A + G+P
Sbjct: 248 AERFEVYFKGIELANGFHELTDGDEQLQRFEQDNRSRAKRGLPQNPIDMNLIAALKHGLP 307

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
              G+A G+DR+VML L A+ + +V  FP++
Sbjct: 308 DCSGVALGVDRLVMLALNAERLSDVIAFPVN 338


>gi|183598051|ref|ZP_02959544.1| hypothetical protein PROSTU_01407 [Providencia stuartii ATCC 25827]
 gi|188022830|gb|EDU60870.1| hypothetical protein PROSTU_01407 [Providencia stuartii ATCC 25827]
          Length = 325

 Score = 38.5 bits (88), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 11/173 (6%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASS-------PEGARDFLVPSRVNQGSFYA 193
           N+++R +II  +R        +E  TP ++ ++       P   R F+ P    QG    
Sbjct: 15  NLLQRAKIIAEIRRFFTERCVLEVETPAMSQATITDIHLVPFNTR-FVGPG-AAQGIDLY 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +   ++N +
Sbjct: 73  LMTSPEYHMKRLLAAGSGPIYQLCRSFRNEEAGRHHNP-EFTMLEWYRPHYDMYRLINEV 131

Query: 254 ENVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           +++L+ V + E +   +    FLR    D +    ++  ++   + + NV EH
Sbjct: 132 DDLLQQVLDCESAELLSYQQAFLRHLDIDPLSAEKSELKEVAARLDLSNVAEH 184



 Score = 37.4 bits (85), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           L  A   G+P   G+A G+DR++M+ L A+ + +V  FP++
Sbjct: 283 LLAALTHGLPECSGVALGVDRLIMIALKAEKISDVIAFPVT 323


>gi|220921876|ref|YP_002497177.1| tRNA synthetase class II (D K and N) [Methylobacterium nodulans ORS
           2060]
 gi|219946482|gb|ACL56874.1| tRNA synthetase class II (D K and N) [Methylobacterium nodulans ORS
           2060]
          Length = 350

 Score = 38.5 bits (88), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 3/91 (3%)

Query: 479 AFQYDLVCNGFEIASG-GIRNHMSEVMLQAFSNVGISKEVVENRF--GGLYRAFQCGMPP 535
           A +++L C G E+A+  G      E   +  + +   + +   R+     + A    MP 
Sbjct: 257 AERFELYCCGVELANAFGELTDADEQRRRFMAEMDEKERIYGERYPLDEDFLAALARMPE 316

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             GIA G DR+VML  GA+ + EV   P+++
Sbjct: 317 ASGIALGFDRLVMLATGARRIEEVIWTPVAE 347


>gi|54310444|ref|YP_131464.1| lysyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81614829|sp|Q6LM16|SYK3_PHOPR RecName: Full=Uncharacterized protein YjeA
 gi|46914885|emb|CAG21662.1| putative lysyl-tRNA synthetase-related protein [Photobacterium
           profundum SS9]
          Length = 323

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 28/129 (21%), Positives = 61/129 (47%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR------DFLVPSRVNQGSFYA 193
           K + +R  +++S+R     +  IE  TP ++ ++           +F+ P      + Y 
Sbjct: 12  KQLKQRAAVLSSIRDFFAGKEVIEVDTPAMSQATVTDVHLHTFQTEFVGPGYAGGQTLYM 71

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  +P+ + + L+++G    +QI   FR+E+      P EF  L+      +  D++N M
Sbjct: 72  M-TSPEFHMKRLLSAGSGPIYQICKSFRNEESGRYHNP-EFTMLEWYRPDFDHHDLMNEM 129

Query: 254 ENVLRGVFE 262
           + +L+ V +
Sbjct: 130 DELLQLVLQ 138



 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 25/40 (62%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           L  A + G P   G+A GIDR++ML L   ++ +V+ FP+
Sbjct: 281 LIEALRAGFPDCAGVALGIDRLIMLALKLDHIDQVTAFPI 320


>gi|163786586|ref|ZP_02181034.1| asparagine--tRNA ligase [Flavobacteriales bacterium ALC-1]
 gi|159878446|gb|EDP72502.1| asparagine--tRNA ligase [Flavobacteriales bacterium ALC-1]
          Length = 477

 Score = 38.5 bits (88), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 57/288 (19%), Positives = 109/288 (37%), Gaps = 27/288 (9%)

Query: 6   THSCGDLGVSDVG-SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           T S  +L   DV    V + GWV   R +    F+ + D   I  +    D   F+ A  
Sbjct: 3   TKSVAELLSKDVTLQDVTVKGWVRTFRANR---FIALNDGSTINNIQCVVDFENFDEALL 59

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
            R        G  +  + E + +      +E+  + +++L  ++    P+  ++   E +
Sbjct: 60  KR-----ITTGSAIHVTGELVESQGKGQSVEIQVKALDVLGDSDPETYPIQPKKHTFEFL 114

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +   L  R +T    +  R+ +  ++        F    TPI+T S  EGA +    +
Sbjct: 115 R-ENAHLRTRTNTFSAVMRLRSSLSFAIHKYFNENGFYYIHTPIVTGSDAEGAGEMFRVT 173

Query: 185 RVNQGSFYALPQAPQQYKQL-------LMASG----------FDRYFQIAPCFRDEDPRS 227
            ++  +          YKQ        L  SG            + +   P FR E+  +
Sbjct: 174 GLDAKNPPLNDDGSVDYKQDFFGKETNLTVSGQLEAETYAMSLGKVYTFGPAFRAENSNT 233

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            R   EF+ ++ E++F++    ++  E+ ++ V       N     FL
Sbjct: 234 TRHLAEFWMVEPEVAFMDLAGNMDLAEDFMKSVLSYALENNKEDLEFL 281


>gi|303253392|ref|ZP_07339535.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307246448|ref|ZP_07528521.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307248573|ref|ZP_07530588.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307255431|ref|ZP_07537238.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307259883|ref|ZP_07541597.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|302647737|gb|EFL77950.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306852652|gb|EFM84884.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306854923|gb|EFM87111.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306861615|gb|EFM93602.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306866053|gb|EFM97927.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
          Length = 327

 Score = 38.5 bits (88), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 10/91 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAF-------SNVGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G      ++  ++ F       + +G+  + +++RF     A + 
Sbjct: 235 AERFEVYYQGLELANGFHELSDTKEQMRRFEQDNVQRAQMGLPAQQLDSRFLA---ALKA 291

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+P   G+A G+DR++M+ + A+ + EV  F
Sbjct: 292 GIPNCSGVALGVDRLMMIAMNAEKIDEVMAF 322


>gi|198242311|ref|YP_002218231.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|238690364|sp|B5FRL4|SYK3_SALDC RecName: Full=Uncharacterized protein YjeA
 gi|197936827|gb|ACH74160.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|326626035|gb|EGE32380.1| Uncharacterized protein YjeA [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 325

 Score = 38.5 bits (88), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A   G+P   G+A GIDR+VML LGA+++ +V  F
Sbjct: 283 LLDALAAGLPDCSGVALGIDRLVMLALGAESLADVIAF 320


>gi|169838303|ref|ZP_02871491.1| hypothetical protein cdivTM_14586 [candidate division TM7
           single-cell isolate TM7a]
          Length = 52

 Score = 38.5 bits (88), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 24/38 (63%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            Y   + GMPP GG+  GIDR++++L  + ++ EV  F
Sbjct: 5   FYHTLRVGMPPAGGVGFGIDRLLIILTDSSDIIEVIPF 42


>gi|253690118|ref|YP_003019308.1| lysyl-tRNA synthetase-related protein GenX [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|259511524|sp|C6DFN3|SYK3_PECCP RecName: Full=Uncharacterized protein YjeA
 gi|251756696|gb|ACT14772.1| lysyl-tRNA synthetase-related protein GenX [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 325

 Score = 38.5 bits (88), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 14/163 (8%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASS-------PEGARDFLVPSRVNQGSFYA 193
           N++KR  II ++R        +E  TP ++ ++       P   R F+ P   +  + Y 
Sbjct: 15  NLLKRASIIAAIRRFFTDRGVLEVETPAMSQATVTDIFLYPFQTR-FVGPGAADGMTMY- 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N +
Sbjct: 73  LMTSPEYHMKRLLAAGSGPIFQLCRSFRNEESGRHHNP-EFTMLEWYRPHYDMYRLMNEV 131

Query: 254 ENVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           +++L+ V + E +   +    FLR    D +     DK  LR 
Sbjct: 132 DDLLQQVLDCESAEMLSYQQAFLRHLELDPL---SVDKAQLRE 171


>gi|268590816|ref|ZP_06125037.1| lysyl-tRNA synthetase GenX [Providencia rettgeri DSM 1131]
 gi|291313596|gb|EFE54049.1| lysyl-tRNA synthetase GenX [Providencia rettgeri DSM 1131]
          Length = 325

 Score = 38.5 bits (88), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           L  A + G+P   G+A G+DR++M+ L A  + +V  FP++
Sbjct: 283 LLAALEHGLPDCSGVAVGVDRLIMIALNADKISDVIAFPVT 323


>gi|304396301|ref|ZP_07378182.1| lysyl-tRNA synthetase-related protein GenX [Pantoea sp. aB]
 gi|304355810|gb|EFM20176.1| lysyl-tRNA synthetase-related protein GenX [Pantoea sp. aB]
          Length = 325

 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 27/42 (64%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A   GMP   G+A G+DR++ML L A+++ +V  FP+ +
Sbjct: 283 LLDALAHGMPACSGVALGVDRLIMLALKAESLSDVIAFPVDR 324


>gi|119469130|ref|ZP_01612114.1| putative fold recognizing lysyl-tRNA [Alteromonadales bacterium
           TW-7]
 gi|119447382|gb|EAW28650.1| putative fold recognizing lysyl-tRNA [Alteromonadales bacterium
           TW-7]
          Length = 324

 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 16/152 (10%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR------DFLVPSRVNQGSFYA 193
           K + +R  I+ ++R      + +E  TP L+A+S            F+ P        Y 
Sbjct: 13  KTLKQRAEILRTIREFFYVRDVMEVETPSLSAASVTDVHLASFNTSFMGPRHAGGLPLY- 71

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+   + L+A+G    FQ+   FR+E+  S   P EF  L+      ++  +++ M
Sbjct: 72  LQTSPEFAMKRLLAAGSGSIFQLCKAFRNEEAGSHHNP-EFTMLEWYRPGFDEFALMDEM 130

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           + +++ V     N    +    RI Y DA ++
Sbjct: 131 DELMQCVL----NVEPAT----RITYQDAFKQ 154


>gi|94267110|ref|ZP_01290746.1| tRNA synthetase, class II (G, H, P and S):tRNA synthetase, class II
           (D, K and N) [delta proteobacterium MLMS-1]
 gi|93452181|gb|EAT02845.1| tRNA synthetase, class II (G, H, P and S):tRNA synthetase, class II
           (D, K and N) [delta proteobacterium MLMS-1]
          Length = 310

 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 8/116 (6%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           N+  R  +I ++R      +++E  TP+L  A +PE     L+P R  +   + L  +P+
Sbjct: 3   NLWLRAAMIRAIRRFFEQRHYLEVETPLLIPAPAPE---PHLLPQRAGK---WFLQTSPE 56

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
              + L+A G  R +QI  CFR  +     LP EF  L+   +  +  D++   E 
Sbjct: 57  ICMKRLLARGIPRIYQICKCFRRRERGRRHLP-EFTMLEWYRAGADYHDLMAECEE 111


>gi|90020730|ref|YP_526557.1| serine/threonine protein kinase [Saccharophagus degradans 2-40]
 gi|89950330|gb|ABD80345.1| serine/threonine protein kinase [Saccharophagus degradans 2-40]
          Length = 325

 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 10/91 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAF-------SNVGISKEVVENRFGGLYRAFQC 531
           A ++++  NG E+A+G      +    + F       + +G+S   ++  F     A + 
Sbjct: 234 ARRFEVYINGVELANGYWELTDAAEQRKRFNADHARRAELGLSLPQIDEAFMA---AIEA 290

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+P   G+A G+DR++M LLGA  + +V  F
Sbjct: 291 GLPECAGVALGVDRLLMALLGADKLSDVLPF 321


>gi|312882763|ref|ZP_07742497.1| lysyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369547|gb|EFP97065.1| lysyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 323

 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 4/92 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMP 534
           A ++++   G E+A+G          LQ F    + +    E  +     L  A + G+P
Sbjct: 231 AERFEVYFKGIELANGFHELEDPREQLQRFERDNLKRVARGEESQPIDRHLIAALESGLP 290

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              G+A G+DR+VML   + ++ ++  FP S+
Sbjct: 291 SCSGVALGVDRLVMLATASDHIDQILAFPFSR 322


>gi|170090366|ref|XP_001876405.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647898|gb|EDR12141.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 464

 Score = 38.5 bits (88), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 15/88 (17%)

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPP 535
           +DL+  G  E+  G +R   ++V+ +     G+ +E  +      R+GG          P
Sbjct: 384 FDLLVPGVGELVGGSVREDRADVLKRKMEEAGLGREAYKWYEELRRYGG---------AP 434

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           H G   G +R+V  + G  NVRE    P
Sbjct: 435 HAGFGMGFERLVGWVGGVDNVRECIPMP 462


>gi|289763777|ref|ZP_06523155.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis GM 1503]
 gi|289711283|gb|EFD75299.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis GM 1503]
          Length = 308

 Score = 38.5 bits (88), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 15/93 (16%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQ---------AFSNVGISKEVVENRFGGLYRAFQC 531
           ++DL   G E+A+G   + +S+ ++Q         A +       V++  F     A + 
Sbjct: 216 KWDLYLRGIELATG--YSELSDPVVQRERFADQARAAAAGDDEAMVLDEDF---LAALEY 270

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP  G   GIDR++M L G  ++RE  LFP+
Sbjct: 271 GMPPCTGTGMGIDRLLMSLTGL-SIRETVLFPI 302


>gi|21957329|gb|AAM84206.1|AE013664_1 putative lysyl-tRNA synthetase [Yersinia pestis KIM 10]
          Length = 332

 Score = 38.5 bits (88), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 27/41 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           L  A + G+P   G+A G+DR+VML L A+ + +V  FP++
Sbjct: 290 LIAALKQGLPDCSGVALGVDRLVMLALNAERLSDVIAFPVN 330


>gi|213428687|ref|ZP_03361437.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
          Length = 212

 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A   G+P   G+A G+DR+VML LGA+++ +V  F
Sbjct: 170 LLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAF 207


>gi|32034933|ref|ZP_00135024.1| COG2269: Truncated, possibly inactive, lysyl-tRNA synthetase (class
           II) [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|126208994|ref|YP_001054219.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|126097786|gb|ABN74614.1| putative lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 327

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 10/91 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAF-------SNVGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G      ++  ++ F       + +G+  + +++RF     A + 
Sbjct: 235 AERFEVYYQGLELANGFHELSDAKEQMRRFEQDNVQRAQMGLPAQQLDSRFLA---ALKA 291

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+P   G+A G+DR++M+ + A+ + EV  F
Sbjct: 292 GIPNCSGVALGVDRLMMIAMNAEKIDEVMAF 322


>gi|188535095|ref|YP_001908892.1| lysyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238689686|sp|B2VCV6|SYK3_ERWT9 RecName: Full=Uncharacterized protein YjeA
 gi|188030137|emb|CAO98023.1| Putative lysyl-tRNA synthetase (Lysine-tRNA ligase) [Erwinia
           tasmaniensis Et1/99]
          Length = 325

 Score = 38.1 bits (87), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------VGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G      S    Q F          G+ ++ ++     L  A   
Sbjct: 233 AERFEVYFKGIELANGFRELTDSREQRQRFEQDNRKRAAAGLPQQPIDTY---LLDALSA 289

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           GMP   G+A G+DR+VML L A+ + +V  F
Sbjct: 290 GMPESSGVALGVDRLVMLALKAEQLSDVIAF 320


>gi|296100928|ref|YP_003611074.1| lysyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295055387|gb|ADF60125.1| lysyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 325

 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A + G+P   G+A G+DR+VML LGA+ + +V  F
Sbjct: 283 LLAALKAGLPDCSGVALGVDRLVMLALGAEQLGDVIAF 320


>gi|91215097|ref|ZP_01252069.1| asparaginyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91186702|gb|EAS73073.1| asparaginyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 480

 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 54/264 (20%), Positives = 109/264 (41%), Gaps = 35/264 (13%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           +++GWV   R +    F+ + D   +   Q V +  +   ++ + V +   + + G    
Sbjct: 20  KVNGWVRAFRSNR---FIALNDGSCLENLQCVVDFKNTDDQVLRKVTTGAAISVSG---- 72

Query: 80  RSAETINANIITGQ-IELSAQKIEILSVA--EELPLPVFGEREYP-ESIRFKYRFLDLRR 135
               T+  +   GQ +EL  + I IL  A  EE+   +   +++  E +R +   L +R 
Sbjct: 73  ----TLKESEGKGQSVELEVKSINILGEAHPEEVKKTILQPKKHSFEKLR-EQAHLRVRT 127

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--------RDFLVPSRVN 187
           +T    +  R+++  ++        F   +TPI+T S  EGA         D   P +  
Sbjct: 128 NTFGAIMRVRSKLSFAVHQYFNDNGFFYVNTPIVTGSDAEGAGEMFKVTNLDLKDPPKTK 187

Query: 188 QGS------FYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            G       F+          Q +    A G  + +   P FR E+  + R   EF+ ++
Sbjct: 188 DGEIDYSQDFFGKETNLTVSGQLEAETYAMGLGKVYTFGPTFRAENSNTTRHLAEFWMIE 247

Query: 239 MEMSFVEQDDILNTMENVLRGVFE 262
            E++F +    ++  E+ ++ V +
Sbjct: 248 PEVAFCDLKGNIDLAEDFIQQVLK 271



 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EIA G  R    +V+L     +GI     E          + G   H G   G +R+V+ 
Sbjct: 403 EIAGGSQREERYDVLLSKMREIGID----EKELWWYLDTRKFGTCVHSGFGLGFERLVLF 458

Query: 550 LLGAKNVREVSLFPMS 565
             G  N+R+V  +P S
Sbjct: 459 ATGMSNIRDVIPYPRS 474


>gi|307257600|ref|ZP_07539360.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306863903|gb|EFM95826.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
          Length = 327

 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 10/91 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAF-------SNVGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G      ++  ++ F       + +G+  + +++RF     A + 
Sbjct: 235 AERFEVYYQGLELANGFHELSDAKEQMRRFEQDNVQRAQMGLPAQQLDSRFLA---ALKA 291

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+P   G+A G+DR++M+ + A+ + EV  F
Sbjct: 292 GIPNCSGVALGVDRLMMIAMNAEKIDEVMAF 322


>gi|330837283|ref|YP_004411924.1| Lysine--tRNA ligase [Spirochaeta coccoides DSM 17374]
 gi|329749186|gb|AEC02542.1| Lysine--tRNA ligase [Spirochaeta coccoides DSM 17374]
          Length = 356

 Score = 38.1 bits (87), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 6/122 (4%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQ--GS--FYALPQAP 198
           +R+R++ +MR    +  ++E  TP+L+    PE        +  ++  GS  FY +P +P
Sbjct: 35  QRSRLLKAMRSWFDSHGYLEVDTPLLSPDLIPEPTIHTFATTFSHEFLGSREFYLVP-SP 93

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+A+G    +Q + CFR+ +        EF  L+      ++ D +   E +L 
Sbjct: 94  EVFMKKLLAAGSGSIYQFSHCFRNNEQIGSHHNPEFTMLEYYTLDADEQDSMALTEELLA 153

Query: 259 GV 260
             
Sbjct: 154 AT 155


>gi|303250999|ref|ZP_07337187.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307250806|ref|ZP_07532735.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307253185|ref|ZP_07535061.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|302650156|gb|EFL80324.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306857165|gb|EFM89292.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306859329|gb|EFM91366.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 327

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 10/91 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAF-------SNVGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G      ++  ++ F       + +G+  + +++RF     A + 
Sbjct: 235 AERFEVYYQGLELANGFHELSDAKEQMRRFEQDNVQRAQMGLPAQQLDSRFLA---ALKA 291

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+P   G+A G+DR++M+ + A+ + EV  F
Sbjct: 292 GIPNCSGVALGVDRLMMIAMNAEKIDEVMAF 322



 Score = 37.4 bits (85), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 61/129 (47%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           +N++KR++I+  +R        +E  TP L+  S         +  FL P      + + 
Sbjct: 18  QNLIKRSKIMAEIRQFFKDRGVLEVETPALSEFSVTDVHLSTFSTQFLSPFSSEAKTLH- 76

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N +
Sbjct: 77  LMTSPEYHMKRLLAAGSGAIFQLCRVFRNEEAGKHHNP-EFTMLEWYRPHFDMYRLINEV 135

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 136 DDLLQQILD 144


>gi|190150860|ref|YP_001969385.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307262013|ref|ZP_07543668.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|307264210|ref|ZP_07545801.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|189915991|gb|ACE62243.1| putative lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306868296|gb|EFN00118.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|306870456|gb|EFN02209.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 327

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 10/91 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAF-------SNVGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G      ++  ++ F       + +G+  + +++RF     A + 
Sbjct: 235 AERFEVYYQGLELANGFHELSDAKEQMRRFEQDNVQRAQMGLPAQQLDSRFLA---ALKA 291

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+P   G+A G+DR++M+ + A+ + EV  F
Sbjct: 292 GIPNCSGVALGVDRLMMIAMNAEKIDEVMAF 322


>gi|165976960|ref|YP_001652553.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|165877061|gb|ABY70109.1| lysine--tRNA ligase [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
          Length = 327

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 10/91 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAF-------SNVGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G      ++  ++ F       + +G+  + +++RF     A + 
Sbjct: 235 AERFEVYYQGLELANGFHELSDAKEQMRRFEQDNVQRAQMGLPAQQLDSRFLA---ALKA 291

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+P   G+A G+DR++M+ + A+ + EV  F
Sbjct: 292 GIPNCSGVALGVDRLMMIAMNAEKIDEVMAF 322


>gi|33151303|ref|NP_872656.1| lysyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|38605186|sp|Q7VPM9|SYK3_HAEDU RecName: Full=Uncharacterized protein YjeA
 gi|33147523|gb|AAP95045.1| lysine--tRNA ligase [Haemophilus ducreyi 35000HP]
          Length = 327

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 10/91 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS-------NVGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G    + ++  ++ F         + +  + ++ RF     A + 
Sbjct: 235 AERFEIYYKGLELANGFHELNDAKEQIRRFERDNQLREQMNLPPQPLDMRFLA---ALKA 291

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+P   G+A G+DR++ML L A +++EV  F
Sbjct: 292 GIPNCSGVALGVDRLIMLALNANHIQEVMAF 322



 Score = 37.4 bits (85), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           + ++KR++I+  +R        +E  TP L+  S         + +FL P    Q     
Sbjct: 18  QTLLKRSKIMAEIRQFFTDRGVLEVETPALSEYSVTDVHLSTFSTEFLSPF-AKQAKTLH 76

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N +
Sbjct: 77  LITSPEYHMKRLLAAGSSSIFQLCRVFRNEESGKRHNP-EFTMLEWYRPHFDMYRLINEV 135

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 136 DDLLQQILD 144


>gi|225558470|gb|EEH06754.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 581

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 13/231 (5%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           ++F+ + D YG+ Q +   D      A ++  E  + I G + +   +    N      E
Sbjct: 174 MMFVTLSDGYGLLQCIFTGDLVKSYDAMTLTLETSIAIHGEMRAVPPK----NHAYDDRE 229

Query: 96  LSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
           L A    I+  A    E +   V  + + P ++ +  R L LR +T    +  R   + +
Sbjct: 230 LHADFFTIIGRAAGDKEAITTRVAPDSD-PHTL-YDNRHLVLRGETSSSVMKVRAATLRA 287

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
            R     +  +E + P +  +  EG           + ++  L Q+ Q Y +  + S  D
Sbjct: 288 FRKVFEEKGILEVTPPSMVQTQVEGGSTLFEFDYYGEKAY--LTQSSQLYLETCLPSLGD 345

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             F I P FR E   + R   E+  ++ E+ F+   D+L+ +E+++  V E
Sbjct: 346 -VFCICPSFRAEKSLTRRHLSEYTHVEAELDFISFTDLLDHLEDMICRVIE 395


>gi|238796044|ref|ZP_04639555.1| lysyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238719989|gb|EEQ11794.1| lysyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 340

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 10/93 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAF-------SNVGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G       +  LQ F       +  G+ +  ++     L  A + 
Sbjct: 248 AERFEVYFKGIELANGFHELTDGDEQLQRFEQDNRSRAKRGLPQHPIDM---NLIAALKH 304

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G+P   G+A G+DR+VML L A+ + +V  FP+
Sbjct: 305 GLPDCSGVALGVDRLVMLALNAERLSDVIAFPV 337


>gi|45440371|ref|NP_991910.1| lysyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|51594766|ref|YP_068957.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108809912|ref|YP_653828.1| lysyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108813469|ref|YP_649236.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145600860|ref|YP_001164936.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|150260594|ref|ZP_01917322.1| putative lysyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153949624|ref|YP_001402619.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|161484883|ref|NP_667955.2| lysyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|162421074|ref|YP_001605290.1| lysyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165926674|ref|ZP_02222506.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165936482|ref|ZP_02225050.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166011859|ref|ZP_02232757.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166213985|ref|ZP_02240020.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167400570|ref|ZP_02306079.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167419045|ref|ZP_02310798.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423148|ref|ZP_02314901.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167469169|ref|ZP_02333873.1| hypothetical protein YpesF_15064 [Yersinia pestis FV-1]
 gi|170026026|ref|YP_001722531.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186893773|ref|YP_001870885.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218927565|ref|YP_002345440.1| lysyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229836621|ref|ZP_04456787.1| predicted lysyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229840233|ref|ZP_04460392.1| predicted lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229842311|ref|ZP_04462466.1| predicted lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229903950|ref|ZP_04519063.1| predicted lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270489062|ref|ZP_06206136.1| lysyl-tRNA synthetase-like protein GenX [Yersinia pestis KIM D27]
 gi|294502471|ref|YP_003566533.1| lysyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|25009411|sp|Q8ZIX3|SYK3_YERPE RecName: Full=Uncharacterized protein YjeA
 gi|81640579|sp|Q66FC6|SYK3_YERPS RecName: Full=Uncharacterized protein YjeA
 gi|123072499|sp|Q1C0Y9|SYK3_YERPA RecName: Full=Uncharacterized protein YjeA
 gi|123246211|sp|Q1CEE4|SYK3_YERPN RecName: Full=Uncharacterized protein YjeA
 gi|166229789|sp|A4TRQ1|SYK3_YERPP RecName: Full=Uncharacterized protein YjeA
 gi|166980065|sp|A7FMZ1|SYK3_YERP3 RecName: Full=Uncharacterized protein YjeA
 gi|238687245|sp|A9QYP2|SYK3_YERPG RecName: Full=Uncharacterized protein YjeA
 gi|238688466|sp|B1JMQ1|SYK3_YERPY RecName: Full=Uncharacterized protein YjeA
 gi|238691357|sp|B2K1Z3|SYK3_YERPB RecName: Full=Uncharacterized protein YjeA
 gi|45435227|gb|AAS60787.1| putative lysyl-tRNA synthetase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51588048|emb|CAH19654.1| putative lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP
           32953]
 gi|108777117|gb|ABG19636.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108781825|gb|ABG15883.1| putative lysyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115346176|emb|CAL19044.1| putative lysyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145212556|gb|ABP41963.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149290002|gb|EDM40079.1| putative lysyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152961119|gb|ABS48580.1| lysyl-tRNA synthetase-like protein [Yersinia pseudotuberculosis IP
           31758]
 gi|162353889|gb|ABX87837.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis Angola]
 gi|165915598|gb|EDR34207.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165921297|gb|EDR38521.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165989218|gb|EDR41519.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166204780|gb|EDR49260.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166963039|gb|EDR59060.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049938|gb|EDR61346.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167057318|gb|EDR67064.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169752560|gb|ACA70078.1| lysyl-tRNA synthetase-related protein GenX [Yersinia
           pseudotuberculosis YPIII]
 gi|186696799|gb|ACC87428.1| lysyl-tRNA synthetase-related protein GenX [Yersinia
           pseudotuberculosis PB1/+]
 gi|229679720|gb|EEO75823.1| predicted lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229690621|gb|EEO82675.1| predicted lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229696599|gb|EEO86646.1| predicted lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229706305|gb|EEO92313.1| predicted lysyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262360501|gb|ACY57222.1| lysyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262364448|gb|ACY61005.1| lysyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270337566|gb|EFA48343.1| lysyl-tRNA synthetase-like protein GenX [Yersinia pestis KIM D27]
 gi|294352930|gb|ADE63271.1| lysyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320013773|gb|ADV97344.1| putative lysyl-tRNA synthetase [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 325

 Score = 38.1 bits (87), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 27/41 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           L  A + G+P   G+A G+DR+VML L A+ + +V  FP++
Sbjct: 283 LIAALKQGLPDCSGVALGVDRLVMLALNAERLSDVIAFPVN 323


>gi|325969342|ref|YP_004245534.1| tRNA synthetase class II (D K and N) [Vulcanisaeta moutnovskia
           768-28]
 gi|323708545|gb|ADY02032.1| tRNA synthetase class II (D K and N) [Vulcanisaeta moutnovskia
           768-28]
          Length = 357

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 7/128 (5%)

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R+  +K + K +  II+++R  + +  F E   PI+   +  G R     +    G  Y 
Sbjct: 45  REDKYKLVFKVQAEIIDALRDFLNSRGFTEVLAPIIGPVTDPGIRGAKQATVDFYGMEYK 104

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG----EFYQLDMEMSFVEQDDI 249
           +  +   YKQ + AS    YF ++P  R E P      G    EFYQLD+E+     D +
Sbjct: 105 VMSSAILYKQYMAASLGKIYF-LSPNIRFE-PNDSVFTGRHLVEFYQLDLEVYGATYDQV 162

Query: 250 LNTMENVL 257
           ++  E+++
Sbjct: 163 IDLAEDMI 170


>gi|332140131|ref|YP_004425869.1| lysyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550153|gb|AEA96871.1| lysyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 322

 Score = 38.1 bits (87), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 4/54 (7%)

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           ++K + EN       A + G+P   G+A G+DR++ML  GA ++ EV  F +S+
Sbjct: 272 VTKPIDEN----FLNALEVGLPLCAGVALGVDRLLMLKTGANHINEVINFTVSR 321


>gi|320089973|gb|ADW08470.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae]
          Length = 202

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 117 DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 171

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 172 LGFERLIAYVTGVQNVRDVIPFPRT 196


>gi|213648692|ref|ZP_03378745.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 184

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 99  DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 153

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 154 LGFERLIAYVTGVQNVRDVIPFPRT 178


>gi|195160946|ref|XP_002021332.1| GL25269 [Drosophila persimilis]
 gi|194118445|gb|EDW40488.1| GL25269 [Drosophila persimilis]
          Length = 397

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 12/90 (13%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGI 539
           ++ N  EI  G +R   SE +L  +   GI         + R  G          PHGG 
Sbjct: 314 MLPNVGEIVGGSMRIWDSEELLNGYKREGIDPTPYYWYTDQRIYGTI--------PHGGC 365

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G++R +  LL   ++REV L+P   + C
Sbjct: 366 GLGLERFLFWLLNRYHIREVCLYPRFLDRC 395


>gi|240277935|gb|EER41442.1| lysyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 209

 Score = 38.1 bits (87), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + + G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 141 SLEFGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 176


>gi|307595113|ref|YP_003901430.1| tRNA synthetase class II (D K and N) [Vulcanisaeta distributa DSM
           14429]
 gi|307550314|gb|ADN50379.1| tRNA synthetase class II (D K and N) [Vulcanisaeta distributa DSM
           14429]
          Length = 357

 Score = 38.1 bits (87), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 7/128 (5%)

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R+  +K + K +  II+++R  + +  F E   PI+   +  G R     +    G  Y 
Sbjct: 45  REDKYKLVFKVQAEIIDALRDFLNSRGFTEVLAPIIGPVTDPGIRGAKQATVDFYGMEYK 104

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG----EFYQLDMEMSFVEQDDI 249
           +  +   YKQ + AS    YF ++P  R E P      G    EFYQLD+E+     D +
Sbjct: 105 VMSSAILYKQYMAASLGKIYF-LSPNIRFE-PNDSVFTGRHLVEFYQLDLEVYGATYDQV 162

Query: 250 LNTMENVL 257
           ++  E+++
Sbjct: 163 IDLAEDMI 170


>gi|169335764|ref|ZP_02862957.1| hypothetical protein ANASTE_02189 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258502|gb|EDS72468.1| hypothetical protein ANASTE_02189 [Anaerofustis stercorihominis DSM
           17244]
          Length = 463

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 15/91 (16%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPH 536
           DL+  G  EI  G  R    +V++     +G++   ++      ++GG+          H
Sbjct: 378 DLLVPGVGEIIGGSQREERYDVLVSRMEELGMNSGSMDWYLDLRKYGGV---------KH 428

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R++M L G KN+R+V  FP + N
Sbjct: 429 AGFGLGFERLIMYLSGMKNIRDVIPFPRTVN 459


>gi|261823167|ref|YP_003261273.1| lysyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261607180|gb|ACX89666.1| lysyl-tRNA synthetase-related protein GenX [Pectobacterium wasabiae
           WPP163]
          Length = 325

 Score = 38.1 bits (87), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 14/163 (8%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASS-------PEGARDFLVPSRVNQGSFYA 193
           N++KR  I+ ++R        +E  TP ++ ++       P   R F+ P   +  + Y 
Sbjct: 15  NLLKRASIVAAVRRFFTDRGVLEVETPAMSQATVTDVFLYPFQTR-FVGPGAADGMTLY- 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N +
Sbjct: 73  LMTSPEYHMKRLLAAGSGPIFQLCRSFRNEESGRHHNP-EFTMLEWYRPHYDMYRLMNEV 131

Query: 254 ENVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           +++L+ V + E +   +    FLR    D +     DK  LR 
Sbjct: 132 DDLLQQVLDCESAEMLSYQQAFLRHLEIDPL---SVDKAQLRE 171


>gi|213027424|ref|ZP_03341871.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 179

 Score = 38.1 bits (87), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 94  DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 148

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 149 LGFERLIAYVTGVQNVRDVIPFPRT 173


>gi|319784265|ref|YP_004143741.1| lysyl-tRNA synthetase-related protein GenX [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317170153|gb|ADV13691.1| lysyl-tRNA synthetase-related protein GenX [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 346

 Score = 38.1 bits (87), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 5/91 (5%)

Query: 479 AFQYDLVCNGFEIASG-GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG---MP 534
           A +++L C G E+A+G G      E   +  + +   + +   R+  L   F      MP
Sbjct: 257 AERFELYCCGVELANGFGELTDADEQRRRFVTEMDEKQRIYGERYP-LDEDFLSALAIMP 315

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           P  GIA G DR+ ML  GA+ + +V   P++
Sbjct: 316 PASGIALGFDRLAMLATGAQKIEDVIWTPVA 346


>gi|319789471|ref|YP_004151104.1| tRNA synthetase class II (D K and N) [Thermovibrio ammonificans
           HB-1]
 gi|317113973|gb|ADU96463.1| tRNA synthetase class II (D K and N) [Thermovibrio ammonificans
           HB-1]
          Length = 304

 Score = 38.1 bits (87), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 5/84 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A ++++   G EIA+G           + FS  G +++     +G L    +  +PP  G
Sbjct: 213 ARRFEVYLKGVEIANGYTELTTYSEYKRVFSKKGGAED-----YGLLKLLEERPLPPCEG 267

Query: 539 IAAGIDRIVMLLLGAKNVREVSLF 562
           +A G DR+VM+L G+  ++EV  F
Sbjct: 268 VALGFDRLVMVLTGSSCLKEVMPF 291


>gi|83310382|ref|YP_420646.1| hypothetical protein amb1283 [Magnetospirillum magneticum AMB-1]
 gi|82945223|dbj|BAE50087.1| Truncated possibly inactive lysyl-tRNA synthetase [Magnetospirillum
           magneticum AMB-1]
          Length = 348

 Score = 38.1 bits (87), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           A   GMP   GIA G DR+VMLL G + + +V   P++
Sbjct: 310 ALDAGMPDSAGIALGFDRLVMLLAGTETIDDVLWAPVA 347


>gi|322513263|ref|ZP_08066387.1| lysine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322120970|gb|EFX92817.1| lysine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 331

 Score = 38.1 bits (87), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 10/91 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAF-------SNVGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G      ++  ++ F       + +G+  + ++ RF     A + 
Sbjct: 239 AERFEVYYKGLELANGFDELSDAKEQMRRFEQDNVQRAQMGLPAQQLDTRFLA---ALKA 295

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+P   G+A G+DR++M+ + A+ + EV  F
Sbjct: 296 GIPNCSGVALGVDRLMMIAMNAEKIDEVMAF 326


>gi|289804400|ref|ZP_06535029.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 167

 Score = 38.1 bits (87), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 27/42 (64%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A   G+P   G+A G+DR+VML LGA+++ +V  F + +
Sbjct: 125 LLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDR 166


>gi|213579940|ref|ZP_03361766.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. E98-0664]
          Length = 35

 Score = 38.1 bits (87), Expect = 4.9,   Method: Composition-based stats.
 Identities = 18/34 (52%), Positives = 21/34 (61%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIF 38
          RT  CG L +S VG  V L GWV+R R  G +IF
Sbjct: 2  RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIF 35


>gi|213420287|ref|ZP_03353353.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 193

 Score = 38.1 bits (87), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 27/42 (64%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A   G+P   G+A G+DR+VML LGA+++ +V  F + +
Sbjct: 151 LLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDR 192


>gi|213026923|ref|ZP_03341370.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 153

 Score = 38.1 bits (87), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 27/42 (64%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A   G+P   G+A G+DR+VML LGA+++ +V  F + +
Sbjct: 111 LLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDR 152


>gi|320536685|ref|ZP_08036697.1| asparaginyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320146467|gb|EFW38071.1| asparaginyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 473

 Score = 38.1 bits (87), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R      + +  + +G++KE     +       + G  PH G   G DR+++ 
Sbjct: 396 EIIGGSEREDNYAALEKRINELGLAKE----NYWWYLDLRKYGTVPHSGFGLGFDRLLLY 451

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G  N+R+V  FP +    D 
Sbjct: 452 VTGMGNIRDVIPFPRAAKLADF 473


>gi|50122888|ref|YP_052055.1| lysyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81643796|sp|Q6D033|SYK3_ERWCT RecName: Full=Uncharacterized protein YjeA
 gi|49613414|emb|CAG76865.1| putative lysyl-tRNA synthetase [Pectobacterium atrosepticum
           SCRI1043]
          Length = 325

 Score = 38.1 bits (87), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 14/163 (8%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASS-------PEGARDFLVPSRVNQGSFYA 193
           N++KR  I+ ++R        +E  TP ++ ++       P   R F+ P   +  + Y 
Sbjct: 15  NLLKRASIVAAVRRFFTDRGVLEVETPAMSQATVTDVFLYPFQTR-FVGPGAADGMTLY- 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N +
Sbjct: 73  LMTSPEYHMKRLLAAGSGPIFQLCRSFRNEESGRHHNP-EFTMLEWYRPHYDMYRLMNEV 131

Query: 254 ENVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           +++L+ V + E +   +    FLR    D +     DK  LR 
Sbjct: 132 DDLLQQVLDCESAEMLSYQQAFLRHLEIDPL---SVDKAQLRE 171



 Score = 37.0 bits (84), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 128/326 (39%), Gaps = 41/326 (12%)

Query: 269 TVSNNFLRICYDDAIRRYGTDKP--DLRNPIIMH-NVTEHFVHSEFRVF---------SK 316
           +V+N   R     A+RR+ TD+   ++  P +    VT+ F++     F         + 
Sbjct: 12  SVANLLKRASIVAAVRRFFTDRGVLEVETPAMSQATVTDVFLYPFQTRFVGPGAADGMTL 71

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRM-NEWARSQGQPGLAYIFWRLDESGNVAGMGPV 375
            L  +P Y +  + A G G     C    NE +     P    + W          M  V
Sbjct: 72  YLMTSPEYHMKRLLAAGSGPIFQLCRSFRNEESGRHHNPEFTMLEWYRPHYDMYRLMNEV 131

Query: 376 AKHLN-IVNTEAIRVRLDMQDGDSCFF--IAGDPLKFCSFAADARNHIAQELGIINCNCF 432
              L  +++ E+     +M      F   +  DPL   S         A++LG+ +  C 
Sbjct: 132 DDLLQQVLDCESA----EMLSYQQAFLRHLEIDPL---SVDKAQLREAAEKLGLGDIACR 184

Query: 433 E----FCWIMDFPF-YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
           E        M F F  E N    K  F ++ F   Q  +  +   D     A ++++   
Sbjct: 185 EDDRDSLVQMLFTFGVEPNIGRDKPAFVYH-FPATQASLAEISSED--HRVAERFEVYFK 241

Query: 488 GFEIASGGIRNHMSEVMLQAFSN-------VGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           G E+A+G      ++   Q F          G+S++ ++     L  A + G+P   G+A
Sbjct: 242 GIELANGFRELTDADEQRQRFEQDNRKRAARGLSQQPIDE---NLLAALKNGLPECSGVA 298

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+DR++ML L A+ + +V  F + +
Sbjct: 299 LGVDRLIMLALKAEKLSDVIAFSVER 324


>gi|213417368|ref|ZP_03350510.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 264

 Score = 37.7 bits (86), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 179 DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 233

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 234 LGFERLIAYVTGVQNVRDVIPFPRT 258


>gi|16763166|ref|NP_458783.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|29144645|ref|NP_807987.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|213052294|ref|ZP_03345172.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
 gi|213581491|ref|ZP_03363317.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
 gi|213855778|ref|ZP_03384018.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
 gi|289829994|ref|ZP_06547445.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
 gi|25009410|sp|Q8Z197|SYK3_SALTI RecName: Full=Uncharacterized protein YjeA
 gi|25529111|pir||AC1047 lysine-tRNA ligase (EC 6.1.1.6) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16505474|emb|CAD06824.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29140284|gb|AAO71847.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
          Length = 325

 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A   G+P   G+A G+DR+VML LGA+++ +V  F
Sbjct: 283 LLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAF 320


>gi|325094255|gb|EGC47565.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 581

 Score = 37.7 bits (86), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 13/231 (5%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           ++F+ + D YG+ Q +   D      A ++  E  + I G + +   +    N      E
Sbjct: 174 MMFVTLSDGYGLLQCIFTGDLVKSYDAMTLTLETSIAIHGEMRAVPPK----NHAYDDRE 229

Query: 96  LSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
           L A    I+  A    E +   V  + + P ++ +  R L LR +T    +  R   + +
Sbjct: 230 LHADFFTIIGRAAGDKEAITTRVAPDSD-PHTL-YDNRHLVLRGETSSSVMKVRAATLRA 287

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
            R     +  +E + P +  +  EG           + ++  L Q+ Q Y +  + S  D
Sbjct: 288 FRKVFEEKGILEVTPPSMVQTQVEGGSTLFEFDYYGEKAY--LTQSSQLYLETCLPSLGD 345

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             F I P FR E   + R   E+  ++ E+ F+   D+L+ +E+++  V E
Sbjct: 346 -VFCICPSFRAEKSLTRRHLSEYTHVEAELDFISFTDLLDHLEDMICRVIE 395


>gi|296446349|ref|ZP_06888294.1| tRNA synthetase class II (D K and N) [Methylosinus trichosporium
           OB3b]
 gi|296256122|gb|EFH03204.1| tRNA synthetase class II (D K and N) [Methylosinus trichosporium
           OB3b]
          Length = 374

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 15/34 (44%), Positives = 23/34 (67%)

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP  G+A G DR+VML  GA+ + +V   P+++
Sbjct: 333 MPPASGVALGFDRLVMLATGAERIEQVLWTPVAE 366


>gi|296815160|ref|XP_002847917.1| asparaginyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238840942|gb|EEQ30604.1| asparaginyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 540

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 36/259 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           VR+ G +  +R      F  I D   +   Q V  P+ A      ++     + I G+  
Sbjct: 68  VRVQGHIRFLRKQKRFAFAQISDGTSLQPIQAVLTPEQAT-----NLTQGAAVEISGIWQ 122

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                 + ++      EL   K++IL  A+    P+  +   P+ +R   +   LR  T 
Sbjct: 123 PTPPGKLQSH------ELQTTKVKILGEADPATYPIQKKFHTPDFLR---QLPHLRLRTP 173

Query: 139 HKNIVKRTR------IINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSR---VNQ 188
             +++ R R      +    R     +NF++   P++T+S  EGA + F +  R     +
Sbjct: 174 FNSLLSRLRSEFIYQLTEEFRSHR-NQNFVQVQPPLITSSDCEGAGEVFSLKPRDAITEE 232

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G      ++P +Y  +      + Y +     + + PR      EFY L++EMS+++  +
Sbjct: 233 GKVIEFFRSP-KYLTVSSQLHLEAYARGVGAEKSDTPRHL---SEFYMLEVEMSYLDSLE 288

Query: 249 ILNT-----MENVLRGVFE 262
            L +     + N+ R V++
Sbjct: 289 PLTSFVETLIRNITRRVYQ 307


>gi|205355106|ref|YP_002228907.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|238690493|sp|B5R9A5|SYK3_SALG2 RecName: Full=Uncharacterized protein YjeA
 gi|205274887|emb|CAR39953.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|326630263|gb|EGE36606.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
          Length = 325

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A   G+P   G+A G+DR+VML LGA+++ +V  F
Sbjct: 283 LLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAF 320


>gi|16767593|ref|NP_463208.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167994774|ref|ZP_02575865.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168244876|ref|ZP_02669808.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168263302|ref|ZP_02685275.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168822526|ref|ZP_02834526.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194447527|ref|YP_002048390.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|197250660|ref|YP_002149261.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197265733|ref|ZP_03165807.1| putative lysyl-tRNA synthetase homolog GenX [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|200388288|ref|ZP_03214900.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|207859493|ref|YP_002246144.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|20141820|sp|Q9ZJ12|SYK3_SALTY RecName: Full=Uncharacterized protein YjeA
 gi|238690032|sp|B5F2M2|SYK3_SALA4 RecName: Full=Uncharacterized protein YjeA
 gi|238690433|sp|B5R019|SYK3_SALEP RecName: Full=Uncharacterized protein YjeA
 gi|238690632|sp|B4TF92|SYK3_SALHS RecName: Full=Uncharacterized protein YjeA
 gi|16422907|gb|AAL23167.1| putative pyruvate oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|194405831|gb|ACF66050.1| putative lysyl-tRNA synthetase homolog GenX [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|197214363|gb|ACH51760.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197243988|gb|EDY26608.1| putative lysyl-tRNA synthetase homolog GenX [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|199605386|gb|EDZ03931.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205327413|gb|EDZ14177.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205336324|gb|EDZ23088.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205341109|gb|EDZ27873.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205347912|gb|EDZ34543.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206711296|emb|CAR35674.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|261249439|emb|CBG27303.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267996677|gb|ACY91562.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301160836|emb|CBW20367.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312915445|dbj|BAJ39419.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|320088774|emb|CBY98532.1| putative lysyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|323132685|gb|ADX20115.1| superoxide dismutase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|332991158|gb|AEF10141.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 325

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A   G+P   G+A G+DR+VML LGA+++ +V  F
Sbjct: 283 LLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAF 320


>gi|321223219|gb|EFX48289.1| Lysyl-tRNA synthetase-related protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
          Length = 325

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A   G+P   G+A G+DR+VML LGA+++ +V  F
Sbjct: 283 LLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAF 320



 Score = 37.0 bits (84), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R      +QGS   L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGSNLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNP-EFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 134 LLQQVLD 140


>gi|169616432|ref|XP_001801631.1| hypothetical protein SNOG_11387 [Phaeosphaeria nodorum SN15]
 gi|160703180|gb|EAT81095.2| hypothetical protein SNOG_11387 [Phaeosphaeria nodorum SN15]
          Length = 506

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           A + GMPP GG   G+DR+VML    K + +V  F   +N   +
Sbjct: 459 ALEWGMPPTGGWGCGLDRLVMLFASKKRIADVLPFGTLRNVVSI 502


>gi|56416139|ref|YP_153214.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197365065|ref|YP_002144702.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|81361574|sp|Q5PLH2|SYK3_SALPA RecName: Full=Uncharacterized protein YjeA
 gi|238690785|sp|B5BKG8|SYK3_SALPK RecName: Full=Uncharacterized protein YjeA
 gi|56130396|gb|AAV79902.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197096542|emb|CAR62151.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 325

 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A   G+P   G+A G+DR+VML LGA+++ +V  F
Sbjct: 283 LLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAF 320


>gi|62182793|ref|YP_219210.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161617615|ref|YP_001591580.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167553566|ref|ZP_02347315.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168231380|ref|ZP_02656438.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168237075|ref|ZP_02662133.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168467060|ref|ZP_02700908.1| lysyl-tRNA synthetase homolog GenX [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|194446410|ref|YP_002043602.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194470854|ref|ZP_03076838.1| lysyl-tRNA synthetase homolog GenX [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194738327|ref|YP_002117289.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|204927009|ref|ZP_03218211.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|224586188|ref|YP_002639987.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|75478917|sp|Q57GN3|SYK3_SALCH RecName: Full=Uncharacterized protein YjeA
 gi|189082342|sp|A9N413|YJEA_SALPB RecName: Full=Uncharacterized protein YjeA
 gi|238693595|sp|B4T2Q3|SYK3_SALNS RecName: Full=Uncharacterized protein YjeA
 gi|238693673|sp|B4TSD9|SYK3_SALSV RecName: Full=Uncharacterized protein YjeA
 gi|254782466|sp|C0Q6B6|SYK3_SALPC RecName: Full=Uncharacterized protein YjeA
 gi|62130426|gb|AAX68129.1| putative pyruvate oxidase (lysyl-tRNA synthetase) [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161366979|gb|ABX70747.1| hypothetical protein SPAB_05475 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194405073|gb|ACF65295.1| putative lysyl-tRNA synthetase homolog GenX [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194457218|gb|EDX46057.1| lysyl-tRNA synthetase homolog GenX [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194713829|gb|ACF93050.1| lysyl-tRNA synthetase homolog GenX [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195630612|gb|EDX49224.1| lysyl-tRNA synthetase homolog GenX [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197290011|gb|EDY29370.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|204323674|gb|EDZ08869.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205322019|gb|EDZ09858.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205334355|gb|EDZ21119.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|224470716|gb|ACN48546.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|322615510|gb|EFY12430.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322618570|gb|EFY15459.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322622017|gb|EFY18867.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322627089|gb|EFY23881.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322631048|gb|EFY27812.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322637733|gb|EFY34434.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322642397|gb|EFY39001.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322645658|gb|EFY42183.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322650502|gb|EFY46910.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322653454|gb|EFY49784.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322659719|gb|EFY55962.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322662070|gb|EFY58286.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322666181|gb|EFY62359.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322672601|gb|EFY68712.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322676031|gb|EFY72102.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322680515|gb|EFY76553.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322684591|gb|EFY80595.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|322717294|gb|EFZ08865.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323192906|gb|EFZ78132.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323197218|gb|EFZ82358.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323201665|gb|EFZ86729.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323206179|gb|EFZ91141.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323213188|gb|EFZ97990.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323215561|gb|EGA00305.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323219546|gb|EGA04031.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323227849|gb|EGA12003.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323229019|gb|EGA13148.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323236369|gb|EGA20445.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323237511|gb|EGA21572.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323241823|gb|EGA25852.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323248028|gb|EGA31965.1| poxB regulator PoxA [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323254641|gb|EGA38452.1| poxB regulator PoxA [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323258300|gb|EGA41977.1| poxB regulator PoxA [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323259577|gb|EGA43211.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323265850|gb|EGA49346.1| poxB regulator PoxA [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323270294|gb|EGA53742.1| poxB regulator PoxA [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 325

 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A   G+P   G+A G+DR+VML LGA+++ +V  F
Sbjct: 283 LLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAF 320


>gi|229895865|ref|ZP_04511035.1| Asparaginyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229700788|gb|EEO88817.1| Asparaginyl-tRNA synthetase [Yersinia pestis Pestoides A]
          Length = 223

 Score = 37.7 bits (86), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           D++  G  EI  G  R    +V+    + +G++KE         YR  +  G  PH G  
Sbjct: 138 DVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDY-----WWYRDLRRYGTVPHSGFG 192

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++  + G +NVR+V  FP +
Sbjct: 193 LGFERLISYVTGVQNVRDVIPFPRT 217


>gi|224983651|pdb|3G1Z|A Chain A, Structure Of Idp01693YJEA, A POTENTIAL T-Rna Synthetase
           From Salmonella Typhimurium
 gi|224983652|pdb|3G1Z|B Chain B, Structure Of Idp01693YJEA, A POTENTIAL T-Rna Synthetase
           From Salmonella Typhimurium
          Length = 326

 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A   G+P   G+A G+DR+VML LGA+++ +V  F
Sbjct: 284 LLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAF 321


>gi|242003767|ref|XP_002422854.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212505724|gb|EEB10116.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 441

 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 5/71 (7%)

Query: 99  QKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-----RDTLHKNIVKRTRIINSMR 153
           +K+E      + P  V   ++  E++R KY + D R      DT+ +N VK T I N  +
Sbjct: 286 RKLEESVKRADSPATVTSSQQQMEAMRSKYDYSDTRTKYQNSDTIQENTVKYTTITNDAQ 345

Query: 154 CRMIAENFIEC 164
            R   E FI C
Sbjct: 346 RRQYKEEFISC 356


>gi|3947886|gb|AAC82540.1| pyruvate oxidase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 325

 Score = 37.7 bits (86), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A   G+P   G+A G+DR+VML LGA+++ +V  F
Sbjct: 283 LLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAF 320


>gi|330468940|ref|YP_004406683.1| asparagine synthetase A [Verrucosispora maris AB-18-032]
 gi|328811911|gb|AEB46083.1| asparagine synthetase A [Verrucosispora maris AB-18-032]
          Length = 338

 Score = 37.7 bits (86), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           + + R  +  + F E   P++   +  GAR          G  Y +  +   YKQ  +  
Sbjct: 40  LYAAREFLRGQGFTELLPPLIGPVTDPGARGAKALDVDFYGHTYKIMTSAILYKQASL-R 98

Query: 209 GFDRYFQIAPCFRDEDPRS---DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           GF + F IAP  R E P +    R   EF+Q+D+E++   ++D ++T   +L  V
Sbjct: 99  GFPKLFYIAPNIRVEPPETVDTGRHLVEFHQIDVEIAGGTREDAMDTAAGLLTHV 153


>gi|213646512|ref|ZP_03376565.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
          Length = 96

 Score = 37.7 bits (86), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 27/42 (64%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A   G+P   G+A G+DR+VML LGA+++ +V  F + +
Sbjct: 54  LLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDR 95


>gi|209876658|ref|XP_002139771.1| asparaginyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
 gi|209555377|gb|EEA05422.1| asparaginyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
          Length = 518

 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G  PH G   G +R+VM++ G  NVR+V  FP     C
Sbjct: 479 GSVPHAGFGLGFERLVMMVTGIDNVRDVIPFPRYPGHC 516


>gi|325958379|ref|YP_004289845.1| ATP phosphoribosyltransferase regulatory subunit [Methanobacterium
           sp. AL-21]
 gi|325329811|gb|ADZ08873.1| ATP phosphoribosyltransferase regulatory subunit [Methanobacterium
           sp. AL-21]
          Length = 429

 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 13/119 (10%)

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL------TASSPEGARDFLVPSRVNQ 188
           RD L + + +R  + N+M+    +  + E  TPI       T  S EG +D +   +   
Sbjct: 10  RDFLFEEMKERKNVENTMKRIFESYGYGEIKTPIFEELSLFTTKSGEGIKDQIYHFQDKS 69

Query: 189 GSFYAL------PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           G   AL      P A    K+L  A    + +    CFR E P++ R   +F+QL  E+
Sbjct: 70  GRDLALRPELTAPVARMYIKELQKAPKPVKMYYFGSCFRYERPQAGRFR-QFWQLGCEL 127


>gi|294634441|ref|ZP_06712977.1| lysyl-tRNA synthetase GenX [Edwardsiella tarda ATCC 23685]
 gi|291092151|gb|EFE24712.1| lysyl-tRNA synthetase GenX [Edwardsiella tarda ATCC 23685]
          Length = 325

 Score = 37.7 bits (86), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A   GMP   G+A G+DR++ML L A+ + EV  F
Sbjct: 283 LLAALAHGMPDSSGVALGVDRLIMLALSAERLSEVIAF 320


>gi|319787278|ref|YP_004146753.1| asparaginyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465790|gb|ADV27522.1| asparaginyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 466

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 93/254 (36%), Gaps = 36/254 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEW 69
           G    G  V + GWV   R    G+ F+++ D   +   QVVA      +E      SE 
Sbjct: 12  GKVAAGGEVTVRGWVRTRRDSKAGLSFVNVSDGSCFAPIQVVAPASLGNYE------SEV 65

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
                G  +  +   + +       E+ A +IE++   E+ PL  +  +    S+ +   
Sbjct: 66  KHLTTGCSVIATGTLVPSQGQGQSFEIQASRIEVVGWVED-PL-TYPMQPKQHSLEYLRE 123

Query: 130 FLDLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           F  LR  T     V R R  +  ++        F   STPI+T S  EGA       RV+
Sbjct: 124 FAHLRPRTNLFGAVTRIRHCLAQAVHRFFHERGFYWISTPIITTSDAEGAGQMF---RVS 180

Query: 188 QGSFYALPQAPQQ----------YKQLLMASG----------FDRYFQIAPCFRDEDPRS 227
                 LP+               +  L  SG            + +   P FR E+  +
Sbjct: 181 TLDLANLPRTKDGEVDFSRDFFGKETFLTVSGQLNVEAYALALSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEM 241
            R   EF+ ++ E+
Sbjct: 241 TRHLAEFWMIEPEI 254


>gi|213608045|ref|ZP_03368871.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
          Length = 267

 Score = 37.7 bits (86), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A   G+P   G+A G+DR+VML LGA+++ +V  F
Sbjct: 225 LLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAF 262


>gi|325068677|ref|ZP_08127350.1| DNA polymerase III, alpha subunit [Actinomyces oris K20]
          Length = 1135

 Score = 37.7 bits (86), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 3/47 (6%)

Query: 8    SCGDLGVSDVGSFVRLSGWV-HRVRPH--GGIIFLDIRDHYGITQVV 51
            S  DL   + GS VR++G V HR RPH   G+IFL++ D  G+  VV
Sbjct: 1035 SAADLADQEHGSRVRVAGVVTHRQRPHTASGMIFLNLEDETGLLNVV 1081


>gi|167856675|ref|ZP_02479363.1| putative lysyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167852197|gb|EDS23523.1| putative lysyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 323

 Score = 37.7 bits (86), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 18/137 (13%)

Query: 437 IMDFPFYEWNE----EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           ++ F F E  E    +E+     H P T  Q  +  +   D    + F++     G E+A
Sbjct: 189 LLQFLFSEVVEANIGKERPTAVYHFPAT--QAALAQISTEDHRVAERFEF--YYKGLELA 244

Query: 493 SGGIRNHMSEVMLQAFSN-------VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
           +G      ++  ++ F         +G+  + ++ RF     A + GMP   G+A G+DR
Sbjct: 245 NGFHELSDAKEQIRRFEQDNVLREAMGLPPQQLDRRF---LEALKAGMPNCSGVALGVDR 301

Query: 546 IVMLLLGAKNVREVSLF 562
           ++M+ + A ++ +V  F
Sbjct: 302 LMMIAMNADSIDQVMAF 318


>gi|238910504|ref|ZP_04654341.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
          Length = 268

 Score = 37.7 bits (86), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A   G+P   G+A G+DR+VML LGA+++ +V  F
Sbjct: 226 LLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAF 263


>gi|109896771|ref|YP_660026.1| lysyl-tRNA synthetase-related protein GenX [Pseudoalteromonas
           atlantica T6c]
 gi|109699052|gb|ABG38972.1| lysyl-tRNA synthetase-related protein GenX [Pseudoalteromonas
           atlantica T6c]
          Length = 327

 Score = 37.7 bits (86), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           + NGF E+A+   +    E   Q   + G+S   ++  F     A   G+P   G+A G+
Sbjct: 247 LANGFHELANAPEQRQRFERDNQQRKSAGLSTVPIDELF---LDALDAGLPDCSGVAVGV 303

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR+VML L   +++ V  F
Sbjct: 304 DRLVMLALEKSDIQHVLAF 322


>gi|77359440|ref|YP_339015.1| fold recognizing lysyl-tRNA [Pseudoalteromonas haloplanktis TAC125]
 gi|123587784|sp|Q3IFP4|SYK3_PSEHT RecName: Full=Uncharacterized protein YjeA
 gi|76874351|emb|CAI85572.1| putative fold recognizing lysyl-tRNA [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 324

 Score = 37.7 bits (86), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 26/42 (61%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A + G+ P  G+A GIDR+VML     N++EV  F +++
Sbjct: 282 LIAALEHGLAPCAGVALGIDRLVMLATQKSNIKEVIAFDVTR 323


>gi|332304893|ref|YP_004432744.1| lysyl-tRNA synthetase-related protein GenX [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172222|gb|AEE21476.1| lysyl-tRNA synthetase-related protein GenX [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 335

 Score = 37.7 bits (86), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 10/91 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS-------NVGISKEVVENRFGGLYRAFQC 531
           A +++L   G E+A+G       E   Q F+       N  +    ++  F     A + 
Sbjct: 243 AERFELYFKGIELANGFHELAHVEEQRQRFNADNSLRKNNDLPSVAIDELF---LSALEV 299

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+P   G+A GIDR+VML L   N+ +V  F
Sbjct: 300 GLPDCAGVAVGIDRLVMLALDKPNISQVLAF 330


>gi|330936056|ref|XP_003305230.1| hypothetical protein PTT_18017 [Pyrenophora teres f. teres 0-1]
 gi|311317841|gb|EFQ86681.1| hypothetical protein PTT_18017 [Pyrenophora teres f. teres 0-1]
          Length = 555

 Score = 37.7 bits (86), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           A + GMPP GG   G+DR+VML    K + +V  F   +N   +
Sbjct: 508 ALEWGMPPTGGWGCGLDRLVMLFASKKRIADVLPFGTLRNVVSI 551


>gi|297154360|gb|ADI04072.1| asparagine synthetase A [Streptomyces bingchenggensis BCW-1]
          Length = 339

 Score = 37.7 bits (86), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           L   T    ++ ++ ++   R  +  E F+E   P++   +  G R          G  Y
Sbjct: 24  LTSATTRNMLLIQSALLQGAREYLCDEGFVELLPPVVGPVTDPGCRGAKQVDIDYYGRRY 83

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDE---DPRSDRLPGEFYQLDMEMSFVEQDDI 249
            L  +   YKQ  + +   + F IAPC R E      + R   EF+Q+D+E +   ++++
Sbjct: 84  KLMTSVIFYKQAALLA-HPKIFYIAPCVRLEPFTTSSTLRHLTEFHQIDVEAADTSREEM 142

Query: 250 LNTMENVLRGVFE 262
           L   + V+RG  +
Sbjct: 143 LEICQGVVRGALQ 155


>gi|312217676|emb|CBX97623.1| similar to lysyl-trna synthetase [Leptosphaeria maculans]
          Length = 556

 Score = 37.4 bits (85), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           A + GMPP GG   G+DR+VML    K + +V  F   +N   +
Sbjct: 509 ALEWGMPPTGGWGCGLDRLVMLFASKKRIADVLPFGTLRNVVSI 552


>gi|219871220|ref|YP_002475595.1| lysyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219691424|gb|ACL32647.1| lysyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 301

 Score = 37.4 bits (85), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 18/137 (13%)

Query: 437 IMDFPFYEWNE----EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           ++ F F E  E    +E+     H P T  Q  +  +   D    + F++     G E+A
Sbjct: 167 LLQFLFSEVVEANIGKERPTAVYHFPAT--QAALAQISTEDHRVAERFEF--YYKGLELA 222

Query: 493 SGGIRNHMSEVMLQAFSN-------VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
           +G      ++  ++ F         +G+  + ++ RF     A + GMP   G+A G+DR
Sbjct: 223 NGFHELSDAKEQIRRFEQDNVLREAMGLPPQQLDRRF---LEALKAGMPNCSGVALGVDR 279

Query: 546 IVMLLLGAKNVREVSLF 562
           ++M+ + A ++ +V  F
Sbjct: 280 LMMIAMNADSIDQVMAF 296


>gi|189197277|ref|XP_001934976.1| lysyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187980924|gb|EDU47550.1| lysyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 615

 Score = 37.4 bits (85), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           A + GMPP GG   G+DR+VML    K + +V  F   +N   +
Sbjct: 568 ALEWGMPPTGGWGCGLDRLVMLFASKKRIADVLPFGTLRNVVSI 611


>gi|171185377|ref|YP_001794296.1| asparagine synthetase A [Thermoproteus neutrophilus V24Sta]
 gi|170934589|gb|ACB39850.1| tRNA synthetase class II (D K and N) [Thermoproteus neutrophilus
           V24Sta]
          Length = 353

 Score = 37.4 bits (85), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 10/152 (6%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R+ +R+    +  L   +  +  I+ ++R  +    F+E   PI+   +  G R   
Sbjct: 31  EWLRYSWRWAQTDKYKLVFKV--QAAIVKAIREYLDGRGFVEVLPPIVGPVTDPGIRGAK 88

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS---DRLPGEFYQLD 238
             S    G  Y +  +   YKQ + AS    YF ++P  R E P S    R   EF+Q+D
Sbjct: 89  QASIDFYGHEYKVMSSAILYKQYMAASLGKIYF-VSPNLRLEPPDSLYTGRHLVEFFQVD 147

Query: 239 MEMSFVEQDDILNTME----NVLRGVFEEFSN 266
           +EM   +    +   E    +V++ V EE+  
Sbjct: 148 IEMYGADYGQAMEVAEGLVTHVVKRVREEYGR 179


>gi|260589066|ref|ZP_05854979.1| DNA protecting protein DprA [Blautia hansenii DSM 20583]
 gi|260540486|gb|EEX21055.1| DNA protecting protein DprA [Blautia hansenii DSM 20583]
          Length = 291

 Score = 37.4 bits (85), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 17/156 (10%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           I+   +  HYG  Q         +  AK +  + V  I GL     A+ I+AN   G ++
Sbjct: 45  IVGARVCSHYGAYQ--------AYRFAKELAQQGVQIISGL-----AKGIDANAHKGALD 91

Query: 96  LSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL--HKNIVKRTRIINSMR 153
           +      +L    ++  P   +R Y E I+      +    TL    N  +R RII+ + 
Sbjct: 92  VGGNTYAVLGCGVDICYPKQNQRLYEEIIKKGGVLSEFENQTLPFAGNFPRRNRIISGLA 151

Query: 154 CRMIAENFIECSTPILTASSP--EGARDFLVPSRVN 187
             ++     + S  ++TA+    +G   F VP RV+
Sbjct: 152 DLVLVVEAKKKSGSLITANYALEQGKTVFAVPGRVD 187


>gi|167527404|ref|XP_001748034.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773452|gb|EDQ87091.1| predicted protein [Monosiga brevicollis MX1]
          Length = 555

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 4/80 (5%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    E+  G  R    EV+ Q   + G+  E     +       + G  PH G   G 
Sbjct: 473 LVPKVGELVGGSQREERLEVLEQRIKDSGLDTE----SYSWYLDLRRYGTVPHAGFGLGF 528

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           +R+V+   G +N+R+V  FP
Sbjct: 529 ERLVLFTTGIENIRDVIPFP 548


>gi|332534313|ref|ZP_08410156.1| lysyl-tRNA synthetase-like protein [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332036223|gb|EGI72696.1| lysyl-tRNA synthetase-like protein [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 324

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 26/42 (61%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L +A + G+P   G+A GIDR+VML    + +++V  F M +
Sbjct: 282 LIKALEHGLPQCAGVALGIDRLVMLATNKEKIKDVIAFDMQR 323


>gi|76802032|ref|YP_327040.1| hypothetical protein NP2780A [Natronomonas pharaonis DSM 2160]
 gi|76557897|emb|CAI49481.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160]
          Length = 498

 Score = 37.4 bits (85), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%)

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
            L+  + F+Y+L  +  ++ASG I     E+ +Q   NV IS+ V++  FG
Sbjct: 54  QLIYYQRFEYELTADTLDMASGVISRRRREIPIQRVQNVDISRNVLQRAFG 104


>gi|326432096|gb|EGD77666.1| asparaginyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 608

 Score = 37.4 bits (85), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 14/79 (17%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVE-----NRFGGLYRAFQCGMPPHGGIAAGID 544
           E+  G  R    +V+ +     G+ +   E      RFG +         PH G   G +
Sbjct: 532 ELVGGSQREERLDVLRRRLQEAGLDESDYEWYLDLRRFGTV---------PHSGFGLGFE 582

Query: 545 RIVMLLLGAKNVREVSLFP 563
           R++ML+ G +N+R+V  +P
Sbjct: 583 RLIMLVTGMENIRDVIPYP 601


>gi|301167077|emb|CBW26656.1| asparaginyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 470

 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G  PH G   G +R +M + G  N+R+V  FP +   CD 
Sbjct: 429 KYGSVPHAGFGLGFERAIMYITGMSNIRDVIPFPRNPGNCDF 470


>gi|154286286|ref|XP_001543938.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150407579|gb|EDN03120.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 581

 Score = 37.4 bits (85), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 13/231 (5%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           ++F+ + D YG+ Q +   D      A ++  E  + I G + +   +    N      E
Sbjct: 174 MMFVTLSDGYGLLQCIFTGDLVKSYGAMTLTLETSIAIHGEMRAVPPK----NHAYDDRE 229

Query: 96  LSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
           L A    I+  A    E +   V  + + P ++ +  R L LR +T    +  R   + +
Sbjct: 230 LHADFFTIIGRAAGDKEAITTRVAPDSD-PHTL-YDNRHLVLRGETSSSVMKVRAATLRA 287

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
            R     +  +E + P +  +  EG           + ++  L Q+ Q Y +  + S  D
Sbjct: 288 FRKVFEEKGILEVTPPSMVQTQVEGGSTLFEFDYYGEKAY--LTQSSQLYLETCLPSLGD 345

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             F I P FR E   + R   E+  ++ E+ F+   D+L+ +E+++  V E
Sbjct: 346 -VFCICPSFRAEKSLTRRHLSEYTHVEAELDFISFTDLLDHLEDMICRVIE 395


>gi|225575661|ref|ZP_03784271.1| hypothetical protein RUMHYD_03754 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037118|gb|EEG47364.1| hypothetical protein RUMHYD_03754 [Blautia hydrogenotrophica DSM
           10507]
          Length = 484

 Score = 37.4 bits (85), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G   H G   G +R VM L G  N+R+V  FP +   CDL
Sbjct: 443 KYGSTRHSGYGLGFERCVMYLTGMSNIRDVIPFPRTVKNCDL 484


>gi|92114648|ref|YP_574576.1| tRNA synthetase, class II (D, K and N) [Chromohalobacter salexigens
           DSM 3043]
 gi|91797738|gb|ABE59877.1| tRNA synthetase, class II (D, K and N) [Chromohalobacter salexigens
           DSM 3043]
          Length = 324

 Score = 37.4 bits (85), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           L  A   GMP   G+A G+DR++ L LG ++V EV  F
Sbjct: 282 LLAALTAGMPSGSGVALGMDRLIQLALGKESVAEVMAF 319


>gi|170587864|ref|XP_001898694.1| Asparaginyl-tRNA synthetase, cytoplasmic [Brugia malayi]
 gi|158593964|gb|EDP32558.1| Asparaginyl-tRNA synthetase, cytoplasmic, putative [Brugia malayi]
          Length = 516

 Score = 37.0 bits (84), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 13/86 (15%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHG 537
           DL+  G  EI  G +R    + + +AF NV I  +     ++ R   LY     G  PHG
Sbjct: 431 DLLMPGVGEIVGGSMRIWKFDELSKAFKNVEIDPKPYYWYLDQR---LY-----GTCPHG 482

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFP 563
           G   G++R +  L    ++R+V L+P
Sbjct: 483 GYGLGLERFICWLTNTNHIRDVCLYP 508


>gi|255535963|ref|YP_003096334.1| asparaginyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255342159|gb|ACU08272.1| Asparaginyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 498

 Score = 37.0 bits (84), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 23/38 (60%)

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + G  PH G   G++R+V+ + G  N+R+V  FP + N
Sbjct: 457 KFGSVPHAGFGLGLERLVLFVTGMTNIRDVIPFPRTPN 494


Searching..................................................done


Results from round 2




>gi|254780419|ref|YP_003064832.1| aspartyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040096|gb|ACT56892.1| aspartyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 622

 Score =  821 bits (2120), Expect = 0.0,   Method: Composition-based stats.
 Identities = 622/622 (100%), Positives = 622/622 (100%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE
Sbjct: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY
Sbjct: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF
Sbjct: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME
Sbjct: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH
Sbjct: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF
Sbjct: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI
Sbjct: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF
Sbjct: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA
Sbjct: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK
Sbjct: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600

Query: 601 ISVTTILRNVYGLKIIHSITLL 622
           ISVTTILRNVYGLKIIHSITLL
Sbjct: 601 ISVTTILRNVYGLKIIHSITLL 622


>gi|315122137|ref|YP_004062626.1| aspartyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495539|gb|ADR52138.1| aspartyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 598

 Score =  731 bits (1887), Expect = 0.0,   Method: Composition-based stats.
 Identities = 508/596 (85%), Positives = 555/596 (93%), Gaps = 1/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTHSCGDL VSDVGSFVRLSGW+HRVRPHGGIIFLDIRDHYG+TQ+VANP+S+CF+
Sbjct: 1   MHRYRTHSCGDLRVSDVGSFVRLSGWIHRVRPHGGIIFLDIRDHYGLTQIVANPESSCFD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IAKSVRSEWV+CIDGLVMSR+AETIN+NI TG+IEL AQ IE+LSVAEELPLPVFGEREY
Sbjct: 61  IAKSVRSEWVVCIDGLVMSRTAETINSNIETGEIELYAQGIEVLSVAEELPLPVFGEREY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE+IRFKYRFLDLRRDTLHKNIVKR  II+SMR RMIAENFIE STPILTASSPEGARDF
Sbjct: 121 PENIRFKYRFLDLRRDTLHKNIVKRANIISSMRHRMIAENFIEYSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+LNTMENVLRG+FEEF+ G  VS NF RICYDDAIR+YGTDKPDLRNPIIM+
Sbjct: 241 MSFVEQEDVLNTMENVLRGLFEEFAEGYPVSQNFPRICYDDAIRKYGTDKPDLRNPIIMN 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NVTEHF  SEFRVFSK+LS NP YEVWAIPAK GG  RAFCDRMN WA+SQGQ GLAYIF
Sbjct: 301 NVTEHFACSEFRVFSKMLSSNPEYEVWAIPAKKGG-TRAFCDRMNAWAQSQGQVGLAYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WRLDE GNV G GPVAKHLNI +TE+IR  LDMQDGD+CFFIAG PLKFC+FAA+ARN+I
Sbjct: 360 WRLDEKGNVTGAGPVAKHLNIESTESIRAMLDMQDGDACFFIAGHPLKFCAFAANARNYI 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           AQELG+I+ N FE CWI+DFPFYEWNEEEKKI+FAHNPF+MPQGGM+SLKG++LLS+KAF
Sbjct: 420 AQELGMIDSNRFELCWIVDFPFYEWNEEEKKIEFAHNPFSMPQGGMKSLKGDNLLSVKAF 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASGGIRN+MS++M+QAFSNVGISKE VE+RFGGLYRAFQ GMPPHGG+A
Sbjct: 480 QYDLVCNGFEIASGGIRNYMSDIMIQAFSNVGISKEAVESRFGGLYRAFQYGMPPHGGMA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDRIVMLLL AK+VREVSLFPM+QNFCDLLMG+PS     QLRELGLRIVE PK
Sbjct: 540 AGIDRIVMLLLRAKSVREVSLFPMNQNFCDLLMGAPSPAISSQLRELGLRIVEKPK 595


>gi|307317752|ref|ZP_07597190.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306896514|gb|EFN27262.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti AK83]
          Length = 595

 Score =  700 bits (1807), Expect = 0.0,   Method: Composition-based stats.
 Identities = 391/596 (65%), Positives = 487/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VRLSGWVHRVR HGG++F+D+RDHYG+TQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDVGSTVRLSGWVHRVRDHGGVLFIDLRDHYGMTQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VR EWV+ +DG V +R+ +T+N N+ TG++EL A++IE+LS A+ELPLPVFGE +Y
Sbjct: 61  TAETVRGEWVIRVDGAVKARTDDTVNKNMPTGEVELYAREIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLHKNIV+RT II +MR RM    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHKNIVRRTEIIAAMRRRMGDIGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGNFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+ + ME ++R +F +F+ G  V++ F RI YD AIR+YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVWDAMEPMIRAIFSDFAGGKPVTDKFPRIPYDTAIRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  E+WAIPAK GG +RAFCDRMN WA+SQGQPGL YIF
Sbjct: 301 EVTEHFAGSGFKVFANMIASNPKVEIWAIPAKTGG-SRAFCDRMNAWAQSQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    T+AIR +L ++DGD+CFF+AG+P KF  FA +AR   
Sbjct: 360 WR-KEGEKLEGAGPLAKNIGEERTDAIRTQLGLEDGDACFFVAGEPAKFYKFAGEARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + +E CWI+DFPFYEWNEEEK++DFAHNPF+MPQGG+ +L  +DLLSIKAF
Sbjct: 419 GEELNLVDRDRYELCWIVDFPFYEWNEEEKRVDFAHNPFSMPQGGLSALSSDDLLSIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASG IRN   E+M++AF NVG+S+  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDMVCNGFEIASGSIRNQSPELMVKAFENVGLSQADVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIDRIVMLL+GAKN+RE+SLFPM+Q   DLLMG+PS  +  QLREL +R +   K
Sbjct: 539 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPSQATPAQLRELSIRPIPQKK 594


>gi|222085492|ref|YP_002544022.1| aspartyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|254781708|sp|B9JCV9|SYD_AGRRK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|221722940|gb|ACM26096.1| aspartyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 596

 Score =  700 bits (1807), Expect = 0.0,   Method: Composition-based stats.
 Identities = 396/597 (66%), Positives = 482/597 (80%), Gaps = 2/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +R+ +T+N  + TG+IEL AQ+IE+LS A+ELPLP+FGE +Y
Sbjct: 61  LAETVRGEWVIRIDGLVKARTEDTVNKTMPTGEIELYAQEIEVLSAAKELPLPIFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRRDTLHKNIVKRT++I+SMR  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRDTLHKNIVKRTQVISSMRRHMGEVGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ NTM  ++  +FEEF+ G  V+  + RI YD AIR+YG+DKPDLRNPI+M 
Sbjct: 241 MSFVTQEDVWNTMAPLMTSIFEEFAEGKPVTKEWPRIPYDVAIRKYGSDKPDLRNPIVME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  EVWAIPAK GG +RAFCDRMN WA+SQGQPGL YIF
Sbjct: 301 AVTEHFAGSGFKVFANMIASNPKVEVWAIPAKTGG-SRAFCDRMNAWAQSQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    T+AIR +L + DGD+CFF+AGDP KF  FA +AR   
Sbjct: 360 WR-KEGEKLEGAGPLAKNIGEERTDAIRTQLGLDDGDACFFVAGDPAKFYKFAGEARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             EL +I+ + FE CWI+DFPF+EW+EEEKK+DFAHNPF+MPQGG+E+L+  D L+IKA+
Sbjct: 419 GDELNLIDRDRFELCWIVDFPFFEWSEEEKKVDFAHNPFSMPQGGLEALQNQDPLTIKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD VCNGFEIASG IRN   E M+ AF  VG+S+  VE RFGGLYRAFQ G PPHGG A
Sbjct: 479 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQADVEERFGGLYRAFQYGAPPHGGAA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRIVMLL+GAKN+RE+SLFPM+Q   DLLMG+PS  +  QLREL +R V   KK
Sbjct: 539 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPSVATPTQLRELAIRPVPPVKK 595


>gi|15964947|ref|NP_385300.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307301018|ref|ZP_07580787.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|24212413|sp|Q92QV4|SYD_RHIME RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|15074126|emb|CAC45773.1| Probable aspartyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306903973|gb|EFN34559.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 595

 Score =  700 bits (1807), Expect = 0.0,   Method: Composition-based stats.
 Identities = 391/596 (65%), Positives = 487/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VRLSGWVHRVR HGG++F+D+RDHYG+TQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDVGSTVRLSGWVHRVRDHGGVLFIDLRDHYGMTQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VR EWV+ +DG V +R+ +T+N N+ TG++EL A++IE+LS A+ELPLPVFGE +Y
Sbjct: 61  TAETVRGEWVIRVDGAVKARTDDTVNKNMPTGEVELYAREIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLHKNIV+RT II +MR RM    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHKNIVRRTEIIAAMRRRMGDIGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGNFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+ + ME ++R +F +F+ G  V++ F RI YD AIR+YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVWDAMEPMIRAIFSDFAGGKPVTDKFPRIPYDTAIRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  E+WAIPAK GG +RAFCDRMN WA+SQGQPGL YIF
Sbjct: 301 EVTEHFAGSGFKVFANMIASNPKVEIWAIPAKTGG-SRAFCDRMNAWAQSQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    T+AIR +L ++DGD+CFF+AG+P KF  FA +AR   
Sbjct: 360 WR-KEGEKLEGAGPLAKNIGEERTDAIRTQLGLEDGDACFFVAGEPAKFYKFAGEARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + +E CWI+DFPFYEWNEEEK++DFAHNPF+MPQGG+ +L  +DLLSIKAF
Sbjct: 419 GEELNLVDRDRYELCWIVDFPFYEWNEEEKRVDFAHNPFSMPQGGLTALSSDDLLSIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASG IRN   E+M++AF NVG+S+  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDMVCNGFEIASGSIRNQSPELMVKAFENVGLSQADVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIDRIVMLL+GAKN+RE+SLFPM+Q   DLLMG+PS  +  QLREL +R +   K
Sbjct: 539 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPSQATPAQLRELSIRPIPQKK 594


>gi|15888491|ref|NP_354172.1| aspartyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|27923862|sp|Q8UG87|SYD_AGRT5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|15156191|gb|AAK86957.1| aspartyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 595

 Score =  699 bits (1805), Expect = 0.0,   Method: Composition-based stats.
 Identities = 400/596 (67%), Positives = 489/596 (82%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVG  VRLSGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDVGETVRLSGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +RS +TIN  + TG+IEL AQ+IE+L VA+ELPLPVFGE EY
Sbjct: 61  VAETVRGEWVIRIDGLVKARSEDTINKGMATGEIELYAQEIEVLGVAKELPLPVFGEPEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLH+NIVKRT+II+SMR  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHRNIVKRTQIISSMRKGMGDLGFAEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+++G F+ALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHEGQFFALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+  TME ++  VFE+F+ G  V+  + RI YD++IR+YG+DKPDLRNPI+M 
Sbjct: 241 MSFVTQEDVWTTMEPMMTAVFEQFAEGKPVTKQWPRIPYDESIRKYGSDKPDLRNPIVME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  +VWAIPAK GG +RAFCDRMN WA+SQGQPGL YIF
Sbjct: 301 AVTEHFDGSGFKVFANMIASNPKVQVWAIPAKTGG-SRAFCDRMNAWAQSQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W+ +E G VAG GP+AK++    TEA+R +L ++ GD+CFF+AGDP KF  FA +AR   
Sbjct: 360 WK-EEEGKVAGSGPLAKNIGEERTEALRQQLGLEAGDACFFVAGDPAKFYKFAGEARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ + FE CWI+DFPF+E+NEEEKKIDFAHNPF+MPQGGME+L+G D LSIKAF
Sbjct: 419 ADELNLIDRDRFEMCWIVDFPFFEYNEEEKKIDFAHNPFSMPQGGMEALEGQDPLSIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD VCNGFEIASG IRN   E+M++AF  VG+S+  VE RFGGLYRAFQ G PPHGG A
Sbjct: 479 QYDAVCNGFEIASGSIRNQSPELMVKAFEKVGLSQSDVEERFGGLYRAFQYGAPPHGGCA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIDR+VMLL+GAKN+RE++LFPM+Q   DLLM +PS  +  QLREL LR+V + K
Sbjct: 539 FGIDRVVMLLVGAKNLREITLFPMNQQAQDLLMNAPSPATPTQLRELALRVVPSKK 594


>gi|150396026|ref|YP_001326493.1| aspartyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166225432|sp|A6U7M8|SYD_SINMW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150027541|gb|ABR59658.1| aspartyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 595

 Score =  699 bits (1803), Expect = 0.0,   Method: Composition-based stats.
 Identities = 393/596 (65%), Positives = 484/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VRLSGWVHRVR HGG++F+D+RDHYG+TQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDVGSTVRLSGWVHRVRDHGGVLFIDLRDHYGMTQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VR EWV+ +DG V +R+ ET+N N+ TG++EL A++IE+LS A+ELPLPVFGE +Y
Sbjct: 61  AAETVRGEWVIRVDGAVKARTDETVNRNMPTGEVELYAREIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLHKNIV+RT II +MR RM    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHKNIVRRTEIIAAMRRRMSDIGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGNFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+ + ME ++R +F +F+ G  V++ F RI YD AIR+YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVWDAMEPMIRAIFADFAGGKPVTDKFPRIPYDAAIRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  E+WAIPAK GG +RAFCDRMN WA+SQGQPGL YIF
Sbjct: 301 EVTEHFAGSGFKVFANMIASNPKVEIWAIPAKTGG-SRAFCDRMNAWAQSQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    T+AIR +L + DGD+CFF+AG+P KF  FA +AR   
Sbjct: 360 WR-KEGEKLEGAGPLAKNIGEERTDAIRTQLGLGDGDACFFVAGEPAKFYKFAGEARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++   +E CWI+DFPFYEWNEEEK++DFAHNPF+MPQGG+ +L  +DLLSIKAF
Sbjct: 419 GEELNLVDRERYELCWIVDFPFYEWNEEEKRVDFAHNPFSMPQGGLTALSSDDLLSIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASG IRN   E+M++AF NVG+S+  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDMVCNGFEIASGSIRNQSPELMVKAFENVGLSQADVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIDRIVMLL+GAKN+RE+SLFPM+Q   DLLMG+PS     QLREL +R V   K
Sbjct: 539 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPSPAEPAQLRELAIRPVPQKK 594


>gi|327194285|gb|EGE61148.1| aspartyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 596

 Score =  698 bits (1802), Expect = 0.0,   Method: Composition-based stats.
 Identities = 390/597 (65%), Positives = 488/597 (81%), Gaps = 2/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +R+ +T+N  + TG+IEL AQ+IE+LS A+ELPLPVFGE +Y
Sbjct: 61  LAETVRGEWVIRIDGLVKARTEDTVNKTMATGEIELYAQEIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLH+NIVKRT++I++MR  M A  F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHRNIVKRTQVISAMRREMGAVGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ NTM  ++  VFEEF++G  V+  + RI YD+AIR+YG+DKPDLRNPI+M 
Sbjct: 241 MSFVTQEDVWNTMGPLMTSVFEEFADGKPVTKEWPRIPYDEAIRKYGSDKPDLRNPIVME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  ++WAIPAK GG +RAFCDRMN WA+SQGQPGL YIF
Sbjct: 301 AVTEHFAGSGFKVFAGMIASNPKVQIWAIPAKTGG-SRAFCDRMNAWAQSQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E+  + G GP+AK++    TEAIR +L + DGD+CFF+AG+P KF  FA +AR   
Sbjct: 360 WR-SENDKLEGAGPLAKNIGEERTEAIRTQLGLGDGDACFFVAGEPEKFYKFAGEARTKA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE CWI+DFPF+EWN+EEKK+DFAHNPF+MPQGG+ +L+  D L+IKAF
Sbjct: 419 GEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQGGLAALQNQDPLTIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD VCNGFEIASG IRN   E M+ AF  VG+S++ VE+RFGGLYRAFQ G PPHGG A
Sbjct: 479 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGLYRAFQYGAPPHGGAA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRIVMLL+GAKN+RE+SLFPM+Q   DLLMG+P+  +  QLREL +R +   KK
Sbjct: 539 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPTPATPTQLRELSIRPIPPVKK 595


>gi|13476902|ref|NP_108471.1| aspartyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|24212416|sp|Q983E9|SYD_RHILO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|14027663|dbj|BAB53932.1| aspartate-tRNA ligase [Mesorhizobium loti MAFF303099]
          Length = 596

 Score =  698 bits (1802), Expect = 0.0,   Method: Composition-based stats.
 Identities = 404/598 (67%), Positives = 487/598 (81%), Gaps = 2/598 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VRLSGWVHRVR HGG++F+D+RDHYG+TQ+VA+PDS  F+
Sbjct: 1   MHRYRSHTCAQLRKSDVGSSVRLSGWVHRVRDHGGLLFIDLRDHYGLTQIVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R +ET+NAN+ TG+IE+ A++IE+LS A+ELPLPVFGE +Y
Sbjct: 61  VAETVRGEWVIRVDGEVKARLSETVNANLPTGEIEIFAREIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRRDTLHKNIV RT+II  MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRDTLHKNIVARTKIIAEMRKRMGDVGFTEFSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLIMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD+LNTME VLRGVFE F+NG  V+  F RI YD A+R+YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQDDVLNTMEPVLRGVFETFANGKPVTQKFQRIPYDVAMRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F+VF+ IL+ +P  EVW IPAK GG +RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 AVSDHFRDSGFKVFANILANDPKAEVWGIPAKTGG-SRAFCDRMNSWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    + G GP+AK++    TEAIR +L + DGD+ FF+AGDP KF SFA  AR   
Sbjct: 360 WRKEGD-KLEGAGPLAKNIGEERTEAIRQQLGLADGDAAFFVAGDPKKFVSFAGAARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++   FE CWI+DFPF+EWNEEEKKIDFAHNPF+MPQGG+++L G DLL IKAF
Sbjct: 419 GEELNLVDRERFELCWIVDFPFFEWNEEEKKIDFAHNPFSMPQGGIDALNGEDLLGIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASGGIRNH+ E M++AF  VG+ +  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDMVCNGFEIASGGIRNHLPETMVKAFETVGLDRATVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           AGIDR+VMLL+GAKN+REV++FPM+Q   DLLM +PS  S +QLREL LR+    K  
Sbjct: 539 AGIDRVVMLLVGAKNLREVTMFPMNQQAYDLLMNAPSEASPQQLRELALRVAPTKKDA 596


>gi|241203986|ref|YP_002975082.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857876|gb|ACS55543.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 596

 Score =  698 bits (1801), Expect = 0.0,   Method: Composition-based stats.
 Identities = 389/597 (65%), Positives = 485/597 (81%), Gaps = 2/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +R+ +T+N  + TG+IEL AQ+IE+LS A+ELPLP+FGE +Y
Sbjct: 61  MAETVRGEWVIRIDGLVKARTEDTVNKTMATGEIELYAQEIEVLSAAKELPLPIFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLHKNIVKRT++I++MR  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHKNIVKRTQVISAMRREMGNVGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ +TM  ++ G+FEEF+ G  V+  + RI YD AIR+YG+DKPDLRNPI+M 
Sbjct: 241 MSFVTQEDVWDTMGPLMTGIFEEFAEGKPVTKEWPRIPYDVAIRKYGSDKPDLRNPIVME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  E+WAIPAK GG +RAFCDRMN WA+S GQPGL YIF
Sbjct: 301 AVTEHFAGSGFKVFAGMIASNPKVEIWAIPAKTGG-SRAFCDRMNAWAQSTGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    + G GP+AK++    T+AIR +L + DGD+CFF+AGDP KF  FA +AR   
Sbjct: 360 WRKEGD-KLEGAGPLAKNIGEERTDAIRTQLGLDDGDACFFVAGDPAKFYKFAGEARTKA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE CWI+DFPF+EW+EEEKK+DFAHNPF+MPQGG+E+L+  D L+IKAF
Sbjct: 419 GEELNLVDRDRFELCWIVDFPFFEWSEEEKKVDFAHNPFSMPQGGLEALQSQDPLTIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD VCNGFEIASG IRN   E M+ AF  VG+S++ VE+RFGGLYRAFQ G PPHGG A
Sbjct: 479 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGLYRAFQYGAPPHGGAA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRI+MLL+GAKN+RE+SLFPM+Q   DLLMG+PS  +  QLREL +R +   KK
Sbjct: 539 FGIDRIIMLLVGAKNLREISLFPMNQQAQDLLMGAPSPATPTQLRELSIRPIPPVKK 595


>gi|325292528|ref|YP_004278392.1| Aspartyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060381|gb|ADY64072.1| Aspartyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 627

 Score =  697 bits (1800), Expect = 0.0,   Method: Composition-based stats.
 Identities = 400/596 (67%), Positives = 489/596 (82%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVG  VRLSGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 33  MHRYRSHTCAALRKSDVGETVRLSGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 92

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +RS +TIN  + TG+IEL AQ+IE+L VA+ELPLPVFGE EY
Sbjct: 93  VAETVRGEWVIRIDGLVKARSEDTINKGMATGEIELYAQEIEVLGVAKELPLPVFGEPEY 152

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLHKNIVKRT+II+SMR  M    F E +TPILTASSPEGARDF
Sbjct: 153 PEDVRLKYRFLDLRRETLHKNIVKRTQIISSMRKGMGDLGFAEYTTPILTASSPEGARDF 212

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+++G F+ALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 213 LVPSRIHEGQFFALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 272

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+  TME ++  VFE+F+ G  V+  + RI YD++IR+YG+DKPDLRNPI+M 
Sbjct: 273 MSFVTQEDVWTTMEPMMTAVFEQFAEGKPVTKEWPRIPYDESIRKYGSDKPDLRNPIVME 332

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  +VWAIPAK GG +RAFCDRMN WA+SQGQPGL YIF
Sbjct: 333 AVTEHFDGSGFKVFANMIASNPKVQVWAIPAKTGG-SRAFCDRMNAWAQSQGQPGLGYIF 391

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W+ +E G VAG GP+AK++    TEA+R +L ++ GD+CFF+AGDP KF  FA +AR   
Sbjct: 392 WK-EEEGKVAGSGPLAKNIGEERTEALRQQLGLEAGDACFFVAGDPAKFYKFAGEARTRA 450

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ + FE CWI+DFPF+E+N+EEKKIDFAHNPF+MPQGGME+L+G D LSIKAF
Sbjct: 451 ADELNLIDRDRFEMCWIVDFPFFEYNDEEKKIDFAHNPFSMPQGGMEALEGQDPLSIKAF 510

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD VCNGFEIASG IRN   E+M++AF  VG+S+  VE RFGGLYRAFQ G PPHGG A
Sbjct: 511 QYDAVCNGFEIASGSIRNQSPELMVKAFEKVGLSQSDVEERFGGLYRAFQYGAPPHGGCA 570

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIDR+VMLL+GAKN+RE++LFPM+Q   DLLM +PS  +  QLREL LR+V + K
Sbjct: 571 FGIDRVVMLLVGAKNLREITLFPMNQQAQDLLMNAPSPATPTQLRELALRVVPSKK 626


>gi|190891179|ref|YP_001977721.1| aspartyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|190696458|gb|ACE90543.1| aspartyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 602

 Score =  697 bits (1800), Expect = 0.0,   Method: Composition-based stats.
 Identities = 390/597 (65%), Positives = 488/597 (81%), Gaps = 2/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 7   MHRYRSHTCAALRKTDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 66

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +R+ +T+N  + TG+IEL AQ+IE+LS A+ELPLPVFGE +Y
Sbjct: 67  LAETVRGEWVIRIDGLVKARTEDTVNKTMATGEIELYAQEIEVLSAAKELPLPVFGEPDY 126

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLH+NIVKRT++I++MR  M A  F E +TPILTASSPEGARDF
Sbjct: 127 PEDVRLKYRFLDLRRETLHRNIVKRTQVISAMRREMGAVGFTEYTTPILTASSPEGARDF 186

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 187 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ NTM  ++  VFEEF++G  V+  + RI YD+AIR+YG+DKPDLRNPI+M 
Sbjct: 247 MSFVTQEDVWNTMGPLMTSVFEEFADGKPVTKEWPRIPYDEAIRKYGSDKPDLRNPIVME 306

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  ++WAIPAK GG +RAFCDRMN WA+SQGQPGL YIF
Sbjct: 307 AVTEHFAGSGFKVFAGMIASNPKVQIWAIPAKTGG-SRAFCDRMNAWAQSQGQPGLGYIF 365

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E+  + G GP+AK++    TEAIR +L + DGD+CFF+AG+P KF  FA +AR   
Sbjct: 366 WR-SENDKLEGAGPLAKNIGEERTEAIRTQLGLGDGDACFFVAGEPEKFYKFAGEARTKA 424

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE CWI+DFPF+EWN+EEKK+DFAHNPF+MPQGG+++L   D L+IKAF
Sbjct: 425 GEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQGGLDALTNQDPLTIKAF 484

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD VCNGFEIASG IRN   E M+ AF  VG+S++ VE+RFGGLYRAFQ G PPHGG A
Sbjct: 485 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGLYRAFQYGAPPHGGAA 544

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRIVMLL+GAKN+RE+SLFPM+Q   DLLMG+P+  +  QLREL +R +   KK
Sbjct: 545 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPTPATPTQLRELSIRPIPPVKK 601


>gi|116251371|ref|YP_767209.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|123081980|sp|Q1MIW0|SYD_RHIL3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|115256019|emb|CAK07100.1| putative aspartyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 596

 Score =  696 bits (1797), Expect = 0.0,   Method: Composition-based stats.
 Identities = 388/597 (64%), Positives = 485/597 (81%), Gaps = 2/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +R+ +T+N  + TG+IEL AQ+IE+LS A+ELPLPVFGE +Y
Sbjct: 61  MAETVRGEWVIRIDGLVKARTEDTVNKTMATGEIELYAQEIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLH+NIVKRT++I++MR  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHRNIVKRTQVISAMRREMGNVGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ NTM  ++  +FEEF+ G  V+  + RI YD+AIR+YG+DKPDLRNPI+M 
Sbjct: 241 MSFVTQEDVWNTMGPLMTSIFEEFAEGKPVTKEWPRIPYDEAIRKYGSDKPDLRNPIVMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  E+WAIPAK GG +RAFCDRMN WA+S GQPGL YIF
Sbjct: 301 AVTEHFAGSGFKVFAGMIASNPKVEIWAIPAKTGG-SRAFCDRMNAWAQSTGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    + G GP+AK++    T+AIR +L + DGD+CFF+AGDP KF  FA +AR   
Sbjct: 360 WRKEGD-KLEGAGPLAKNIGEERTDAIRTQLGLDDGDACFFVAGDPAKFYKFAGEARTKA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE CWI+DFPF+EW+EE+KK+DFAHNPF+MPQGG+++L+  D L+IKAF
Sbjct: 419 GEELNLVDRDRFELCWIVDFPFFEWSEEDKKVDFAHNPFSMPQGGLDALQNQDPLTIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD VCNGFEIASG IRN   E M+ AF  VG+S++ VE+RFGGLYRAFQ G PPHGG A
Sbjct: 479 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGLYRAFQYGAPPHGGAA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRIVMLL+GAKN+RE+SLFPM+Q   DLLMG+PS  +  QLREL +R +   KK
Sbjct: 539 FGIDRIVMLLVGAKNLREISLFPMNQQAQDLLMGAPSPAAPTQLRELSIRPIPPVKK 595


>gi|227821517|ref|YP_002825487.1| aspartyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|254781746|sp|C3M9G8|SYD_RHISN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|227340516|gb|ACP24734.1| aspartyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 595

 Score =  696 bits (1795), Expect = 0.0,   Method: Composition-based stats.
 Identities = 390/596 (65%), Positives = 492/596 (82%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VRLSGWVHRVR HGG++F+D+RDHYG+TQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDVGSTVRLSGWVHRVRDHGGVLFIDLRDHYGMTQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDG V +R+ +T+N N+ TG+IEL A++IE+LS A+ELPLPVFGE +Y
Sbjct: 61  MAETVRGEWVIRIDGTVKARTDDTVNKNMPTGEIELYAREIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLH+NIVKRT +I++MR  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHRNIVKRTEVISAMRRGMSDIGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+ +TME ++R +F +F++G  V++ F RI YD AIR+YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVWDTMEPMIRAIFADFADGKPVTDKFPRIPYDTAIRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VT+HF  S F+VF+ +++ NP  E+WAIPAK GG +RAFCDRMN WA+SQGQPGL YIF
Sbjct: 301 EVTQHFAGSGFKVFANMIATNPKVEIWAIPAKTGG-SRAFCDRMNAWAQSQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GP+AK++    T+AIR +L ++DGD+CFF+AG+P KF  FA +AR   
Sbjct: 360 WR-KEGEKLEGAGPLAKNIGEERTDAIRTQLGLEDGDACFFVAGEPAKFYKFAGEARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE CWI+DFPFYEWNE+EK++DFAHNPF+MPQGG+++L G+DLLSIKAF
Sbjct: 419 GEELNLVDRDRFELCWIVDFPFYEWNEDEKRVDFAHNPFSMPQGGLKALSGDDLLSIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASG IRN   E+M++AF NVG+S+  VE +FGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDMVCNGFEIASGSIRNQSPELMVKAFENVGLSQADVEEQFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIDRIVML++GAKN+RE+SLFPM+Q   DLLMG+PS  +  QLREL +R +   K
Sbjct: 539 FGIDRIVMLIVGAKNLREISLFPMNQQAVDLLMGAPSPATPAQLRELAIRPIPQKK 594


>gi|319407180|emb|CBI80819.1| Aspartyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 596

 Score =  695 bits (1794), Expect = 0.0,   Method: Composition-based stats.
 Identities = 394/596 (66%), Positives = 486/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L   D+G  VRLSGW+HRVR HGGI+F+D+RDH+GITQ+V +P+S  F 
Sbjct: 1   MHRYRSHNCAALRKCDMGRQVRLSGWIHRVRDHGGILFIDLRDHFGITQIVVDPNSPAFT 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + VRSEWV+ +DG V +R+ E IN  + TG+IE+ A+++EILS A+ELPLPVFGE +Y
Sbjct: 61  IIEKVRSEWVIRVDGEVRARADEVINTALPTGEIEIFAKEVEILSKADELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+T+HKNI++RT II S+R  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTEIIASIRRHMQDCAFTEFTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DIL TME ++R +FEEF++G +V+ NF RI YD+A+++YG+DKPDLRNPIIM 
Sbjct: 241 MSFVEQEDILVTMEPIIRSIFEEFADGKSVTQNFPRISYDEAMQKYGSDKPDLRNPIIME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF  S F+VFS+IL+ +    +WAIPAK GG +RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 DVSQHFRDSGFKVFSQILASDQNACIWAIPAKNGG-SRAFCDRMNAWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E+GN  G GP+AK++    +EAIRV+L ++ GD+CFF+AGDP KF SF+  AR  I
Sbjct: 360 WR-EENGNFEGAGPIAKNIGEQRSEAIRVQLGLESGDACFFVAGDPKKFASFSGAARTRI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+  CF F WI+DFPF+EWNE+EKK+DFAHNPF+MPQGG  +L   D LS+KAF
Sbjct: 419 GEELGLIDRECFSFAWIIDFPFFEWNEDEKKLDFAHNPFSMPQGGKNALDSQDPLSLKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG+EIASGGIRNH  E+ML+ F+  G+S+EVVE RFGGLYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKVFNLAGLSQEVVEERFGGLYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDRIVMLL G KN+REVSLFPM+Q   DLLM +PS VS  QL +LG+RI    K
Sbjct: 539 AGIDRIVMLLQGVKNLREVSLFPMNQQALDLLMSAPSDVSAVQLSDLGIRITPTVK 594


>gi|319404162|emb|CBI77755.1| Aspartyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 596

 Score =  695 bits (1793), Expect = 0.0,   Method: Composition-based stats.
 Identities = 395/596 (66%), Positives = 487/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L   D+G  VRLSGWVHRVR HGGI+F+D+RDH+GITQ+V +P+S  F 
Sbjct: 1   MHRYRSHNCAALRKCDMGRQVRLSGWVHRVRDHGGILFIDLRDHFGITQIVVDPNSPAFT 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + VRSEWV+ +DG V +R+ E INA + TG+IE+ A+++EILS A+ELPLPVFGE +Y
Sbjct: 61  IIEKVRSEWVIRVDGEVRARADEVINAALPTGEIEIFAKEVEILSKADELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+T+HKNI++RT II S+R  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTEIIASIRRHMQDCAFTEFTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DIL TME ++R +FEEF++G +V+ NF RI YD+A+++YG+DKPDLRNPIIM 
Sbjct: 241 MSFVEQEDILVTMEPIIRSIFEEFADGKSVTQNFPRISYDEAMQKYGSDKPDLRNPIIME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF  S F+VFS+IL+ +    +WAIPAK GG +RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 DVSQHFRDSGFKVFSQILASDQNACIWAIPAKNGG-SRAFCDRMNAWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E+GN  G GP+AK++    +EAIRV+L ++ GD+CFF+AGDP KF SF+  AR  I
Sbjct: 360 WR-EENGNFEGAGPIAKNIGEQRSEAIRVQLGLESGDACFFVAGDPKKFASFSGAARTRI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+  CF F WI+DFPF+EWNE+EKK+DFAHNPF+MPQGG  +L   D LS+KAF
Sbjct: 419 GEELGLIDRECFSFAWIIDFPFFEWNEDEKKLDFAHNPFSMPQGGKNALDSQDPLSLKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG+EIASGGIRNH  E+ML+ F+  G+S+EVVE RFGGLYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKVFNLAGLSQEVVEERFGGLYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AG+DRIVMLL G KN+REVSLFPM+Q   DLLM +PS VS  QL +LG+RI    K
Sbjct: 539 AGVDRIVMLLQGVKNLREVSLFPMNQQALDLLMSAPSDVSAVQLSDLGIRITPTVK 594


>gi|209548707|ref|YP_002280624.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|238064671|sp|B5ZX21|SYD_RHILW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|209534463|gb|ACI54398.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 596

 Score =  694 bits (1791), Expect = 0.0,   Method: Composition-based stats.
 Identities = 387/597 (64%), Positives = 487/597 (81%), Gaps = 2/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +R+ +T+N  + TG+IEL AQ+IE+LS A+ELPLPVFGE +Y
Sbjct: 61  MAETVRGEWVIRIDGLVKARTEDTVNKAMATGEIELYAQEIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLHKNIVKRT++I++MR  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHKNIVKRTQVISAMRREMGNVGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ +TM  ++  VFEEF+ G  V+  + RI YD+AIR+YG+DKPDLRNPI+M 
Sbjct: 241 MSFVTQEDVWDTMGPLMTSVFEEFAEGKPVTKEWPRIPYDEAIRKYGSDKPDLRNPIVME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  ++WAIPAK GG +RAFCDRMN WA+SQGQPGL YIF
Sbjct: 301 AVTEHFAGSGFKVFAGMIASNPKVQIWAIPAKTGG-SRAFCDRMNAWAQSQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E+  + G GP+AK++    T+AIR +L + DGD+CFF+AG+P KF  FA +AR   
Sbjct: 360 WR-SENDKLEGAGPLAKNIGEERTDAIRTQLGLGDGDACFFVAGEPEKFYKFAGEARTKA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE CWI+DFPF+EW+EE+KK+DFAHNPF+MPQGG+++L+  D L+IKAF
Sbjct: 419 GEELNLVDRDRFELCWIVDFPFFEWSEEDKKVDFAHNPFSMPQGGLDALQNQDPLTIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD VCNGFEIASG IRN   E M+ AF  VG+S++ VE+RFGGLYRAFQ G PPHGG A
Sbjct: 479 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGLYRAFQYGAPPHGGAA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRIVMLL+GAKN+RE+S+FPM+Q   DLLMG+PS  +  QLREL +R +   KK
Sbjct: 539 FGIDRIVMLLVGAKNLREISVFPMNQQAQDLLMGAPSPATPTQLRELSIRPIPPVKK 595


>gi|260466879|ref|ZP_05813063.1| aspartyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259029381|gb|EEW30673.1| aspartyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 598

 Score =  694 bits (1790), Expect = 0.0,   Method: Composition-based stats.
 Identities = 400/598 (66%), Positives = 486/598 (81%), Gaps = 2/598 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VRLSGWVHRVR HGG++F+D+RDHYG+TQ+VA+PDS  F+
Sbjct: 3   MHRYRSHTCAQLRKSDVGSTVRLSGWVHRVRDHGGLLFIDLRDHYGLTQIVADPDSPAFK 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R  ET NAN+ TG+IE+ A++IE+LS A+ELPLPVFGE +Y
Sbjct: 63  VAETVRGEWVIRVDGEVKARLPETTNANLPTGEIEIFAREIEVLSAAKELPLPVFGEPDY 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRRDTLHKNIV RT+II  MR RM    F E STPILTASSPEGARDF
Sbjct: 123 PEDIRLKYRFLDLRRDTLHKNIVARTKIIAEMRKRMTDVGFTEFSTPILTASSPEGARDF 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 183 LVPSRIHPGTFYALPQAPQQYKQLIMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 242

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD+L+TME V+RGVFE F+NG  V+  F RI YD A+R+YG+DKPDLRNPI M 
Sbjct: 243 MSFVEQDDVLSTMEPVMRGVFETFANGKPVTQTFQRIPYDVAMRKYGSDKPDLRNPIEMQ 302

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F+VF+ IL+ +P  EVW IPAK GG +RAFCDRMN WA+ +GQPGL YIF
Sbjct: 303 AVSDHFRDSGFKVFANILANDPKAEVWGIPAKTGG-SRAFCDRMNSWAQGEGQPGLGYIF 361

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    + G GP+AK++    TEAIR++L + DGD+ FF+AGDP KF SFA  AR   
Sbjct: 362 WRKEGD-KLEGAGPLAKNIGEERTEAIRLQLGLADGDAAFFVAGDPKKFVSFAGAARTRA 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++   FE CWI+DFPF+EWNEEEKKIDFAHNPF+MPQGG+++L G DLL IKAF
Sbjct: 421 GEELNLVDRERFELCWIVDFPFFEWNEEEKKIDFAHNPFSMPQGGIDALNGEDLLGIKAF 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASGGIRNH+ E M++AF  VG+ +  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 481 QYDMVCNGFEIASGGIRNHLPETMVKAFETVGLDRATVEERFGGLYRAFQYGAPPHGGMA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           AG+DR+VMLL+GAKN+RE+++FPM+Q   DLLM +PS  S +QLREL LR+    K  
Sbjct: 541 AGVDRVVMLLVGAKNLREITMFPMNQQAYDLLMNAPSEASPQQLRELALRVAPTKKDA 598


>gi|319898852|ref|YP_004158945.1| Aspartyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402816|emb|CBI76367.1| Aspartyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 596

 Score =  693 bits (1789), Expect = 0.0,   Method: Composition-based stats.
 Identities = 394/596 (66%), Positives = 484/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L   D+G  VRLSGWVHRVR HGGI+F+D+RDH+GITQ+V +P+S  F 
Sbjct: 1   MHRYRSHNCAALRKCDIGRQVRLSGWVHRVRDHGGILFIDLRDHFGITQIVVDPNSPAFT 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + VRSEWV+C+DG V  R+ E IN  + TG+IE+ A+++EILS ++ELPLPVFGE +Y
Sbjct: 61  IIEKVRSEWVICVDGEVRVRADEVINTTLSTGEIEIFAKEVEILSRSDELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+T+HKNI++RT II S+R  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTEIIASIRRHMQDCAFTEFTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI  TME ++R +FEEF++G +V+ NF RI YD+A+++YG+DKPDLRNPIIM 
Sbjct: 241 MSFVEQEDIFATMEPIMRSIFEEFADGKSVTQNFPRISYDEAMQKYGSDKPDLRNPIIME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF  S+F+VFS+IL+ +    VWAIPAK GG +RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 DVSQHFRDSDFKVFSQILTNDKDACVWAIPAKTGG-SRAFCDRMNAWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E GN  G GP+AK++    TEAIRV+L +++GD+CFF AG+P KF SFA   R  I
Sbjct: 360 WR-EEDGNFEGAGPIAKNIGEQRTEAIRVQLGLENGDACFFTAGNPKKFASFAGAVRTRI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+  CF F WI+DFPF+EWNE+EKK+DFAHNPF+MPQGG ++L   D LS+KAF
Sbjct: 419 GEELDLIDRGCFSFAWIVDFPFFEWNEDEKKLDFAHNPFSMPQGGKDALDSEDPLSLKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG+EIASGGIRNH  E+ML+ F+  G+SKEVVE RFGGLYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKIFNIAGLSKEVVEERFGGLYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AG+DRIVMLL G KN+REVSLFPM+Q   DLLM +PS VS  QL +LG+RI    K
Sbjct: 539 AGVDRIVMLLQGVKNLREVSLFPMNQQALDLLMSAPSDVSAVQLCDLGIRIAPTVK 594


>gi|121602128|ref|YP_989155.1| aspartyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|166225321|sp|A1UT52|SYD_BARBK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|120614305|gb|ABM44906.1| aspartyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 596

 Score =  692 bits (1786), Expect = 0.0,   Method: Composition-based stats.
 Identities = 396/594 (66%), Positives = 486/594 (81%), Gaps = 2/594 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L   DVG+ VRLSGWVHRVR HGGI+F+D+RDH+GITQ+V NPDS+ F+
Sbjct: 1   MHRYRSHNCAALRKCDVGTQVRLSGWVHRVRDHGGILFVDLRDHFGITQIVVNPDSSAFQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + VRSEWV+C+DG V +RS E IN  + TG+IE+ A +IEILS ++ELPLPVFGE +Y
Sbjct: 61  IMEKVRSEWVICVDGKVCARSDEVINTTLPTGEIEIFADEIEILSKSDELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR T+HKNI++RT II+S+R  M    F E +TP+LTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRVTMHKNIMRRTEIISSIRRHMQDSGFTEFTTPLLTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+L TME ++R VFEEFS+G  V+ +F RI YD+A+R+YG+DKPDLRNPII+ 
Sbjct: 241 MSFVEQEDVLATMEPIIRSVFEEFSDGKLVTQSFPRISYDEAMRKYGSDKPDLRNPIIIE 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF  S+F+VF++IL+ N   +VWAIPAK GG NRAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 DVSQHFYDSDFKVFAQILANNENAQVWAIPAKTGG-NRAFCDRMNGWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E  N  G GP+AK++    TEAIR +L +++GD+CFF+AGDP KF SFA  +R  I
Sbjct: 360 WR-KEGENFEGAGPIAKNIGEQRTEAIRTQLGLKEGDACFFVAGDPKKFASFAGASRTRI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+  CF F WI+DFPF+EWNE+EKKIDFAHNPF+MPQGGM ++   D L+IKAF
Sbjct: 419 GEELDLIDSKCFSFAWIVDFPFFEWNEDEKKIDFAHNPFSMPQGGMNAVDSQDPLTIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG+EIASGGIRNH  E+ML+ F+  G+S+E+VE RFGGLYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKVFNLAGLSREIVEERFGGLYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           AG+DRIVMLL G KN+RE+SLFPM+Q   DLLM +PS VS  QL +LG+RI   
Sbjct: 539 AGVDRIVMLLQGVKNLREISLFPMNQQALDLLMSAPSDVSATQLNDLGIRIFPK 592


>gi|240850738|ref|YP_002972138.1| aspartyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267861|gb|ACS51449.1| aspartyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 597

 Score =  691 bits (1784), Expect = 0.0,   Method: Composition-based stats.
 Identities = 391/596 (65%), Positives = 488/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H C  L   DVG  VRLSGWVHRVR HGGI+F+D+RDH+GITQ+VA+P S  F+
Sbjct: 1   MHRYRSHHCAALRRCDVGEQVRLSGWVHRVRDHGGILFVDLRDHFGITQIVADPASPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + VRSEWV+ +DG V +RS E INA + TG+IE+ AQ++EILS ++ELPLPVFGE +Y
Sbjct: 61  VIEKVRSEWVIRVDGEVCARSDEVINATLPTGEIEIVAQEVEILSKSDELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+T+HKNI++RT II +MR  M    F E +TP+LTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTEIIAAMRRAMQNNGFTEFTTPLLTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRVHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+L TME ++R +FEEF++G TV+ +F RI YD+A+++YG+DKPDLRNPIIM 
Sbjct: 241 MSFVEQEDVLATMEPIMRSIFEEFADGKTVTQSFPRISYDEAMQKYGSDKPDLRNPIIME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF +S F+VFS+IL+ +   +VWAIPAK GG +RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 DVSQHFYNSGFKVFSQILANDENAQVWAIPAKTGG-SRAFCDRMNVWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E GN  G GP+AK++     EA+R++L ++ GD+CFF+AGDP KF SFA  AR  +
Sbjct: 360 WR-EEKGNFEGAGPIAKNIGQQRAEALRIQLGLESGDACFFVAGDPKKFASFAGAARTRV 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++   F   WI+DFPF+EWNE+EKKIDFAHNPF+MPQGG  +L+  D L++KAF
Sbjct: 419 GEELDLLDRESFSLAWIVDFPFFEWNEDEKKIDFAHNPFSMPQGGENALETQDPLTLKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG+EIASGGIRNH+ E+ML+ F  VG+SKEVV++RFGGLYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGYEIASGGIRNHLPEMMLKVFELVGLSKEVVKDRFGGLYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDRI+MLL G KN+REV+LFPM+Q   DLLM +PS VS  QLR+LG+R+    K
Sbjct: 539 AGIDRIIMLLQGVKNLREVALFPMNQQALDLLMSAPSDVSPTQLRDLGIRMAPTHK 594


>gi|86357135|ref|YP_469027.1| aspartyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86281237|gb|ABC90300.1| aspartyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 602

 Score =  691 bits (1783), Expect = 0.0,   Method: Composition-based stats.
 Identities = 389/597 (65%), Positives = 488/597 (81%), Gaps = 2/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VR++GWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 7   MHRYRSHTCAALRKTDVGSTVRIAGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 66

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +R+ +T+N  + TG+IEL AQ+IE+LS A+ELPLPVFGE EY
Sbjct: 67  MAETVRGEWVIRIDGLVKARTEDTVNKTMATGEIELYAQEIEVLSAAKELPLPVFGEPEY 126

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLHKNIVKRT++I++MR  M +  F E +TPILTASSPEGARDF
Sbjct: 127 PEDVRLKYRFLDLRRETLHKNIVKRTQVISAMRREMGSAGFTEYTTPILTASSPEGARDF 186

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 187 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ NTM  ++  VFEEF+ G  V+  + RI YD+AIR+YG+DKPDLRNPI+M 
Sbjct: 247 MSFVTQEDVWNTMGPLMTKVFEEFAEGKPVTKEWPRIPYDEAIRKYGSDKPDLRNPIVME 306

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  +VWAIPAK GG +RAFCDRMN WA+SQGQPGL YIF
Sbjct: 307 AVTEHFAGSGFKVFAGMIASNPKVQVWAIPAKTGG-SRAFCDRMNAWAQSQGQPGLGYIF 365

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    + G GP+AK++    T+AIR +L + DGD+CFF+AG+P KF  FA +AR   
Sbjct: 366 WRKEGD-KLEGAGPLAKNIGEERTDAIRTQLGLDDGDACFFVAGEPEKFYKFAGEARTKA 424

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE CWI+DFPF+EWN+EEKK+DFAHNPF+MPQGG+++L+  D L+IKAF
Sbjct: 425 GEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQGGLDALQNQDPLTIKAF 484

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD VCNGFEIASG IRN   E M+ AF  VG+S++ VE+RFGGLYRAFQ G PPHGG A
Sbjct: 485 QYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGLYRAFQYGAPPHGGAA 544

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRI+MLL+GAKN+RE+SLFPM+Q   DLLMG+PS  ++ QLREL +R +   KK
Sbjct: 545 FGIDRIIMLLVGAKNLREISLFPMNQQAQDLLMGAPSPATLTQLRELAIRPIPPVKK 601


>gi|319405614|emb|CBI79237.1| Aspartyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 596

 Score =  691 bits (1783), Expect = 0.0,   Method: Composition-based stats.
 Identities = 394/596 (66%), Positives = 482/596 (80%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L   D+G  VRLSGWVHRVR HGGI+F+D+RDH+GITQ+V +P+S  F 
Sbjct: 1   MHRYRSHNCAALRKCDMGRQVRLSGWVHRVRDHGGILFIDLRDHFGITQIVVDPNSPAFR 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + VRSEWV+ +DG V +R+ E +N  + TG+IE+ A+++EILS A+ELPLPVFGE +Y
Sbjct: 61  IIEKVRSEWVIRVDGEVRARADEVVNTALPTGEIEIFAKEVEILSKADELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+T+HKNI++RT II S+R  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTAIIASIRRHMQNCAFTEFTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHQGQFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI  T+E ++R +FEEF++G +V+ NF RI YD+A+++YG+DKPDLRNPIIM 
Sbjct: 241 MSFVEQEDIFVTIEPIIRSIFEEFADGKSVTQNFPRISYDEAMQKYGSDKPDLRNPIIME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF  S F+VFS+IL+ +    VWAIPAK GG +RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 DVSKHFQDSGFKVFSQILASDQNACVWAIPAKNGG-SRAFCDRMNVWAQCEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E+G   G GP+AK++    TEAIR++L ++ GD+CFF+AGDP KF SF+  AR  I
Sbjct: 360 WR-EENGIFEGAGPIAKNIGEQRTEAIRMQLGLESGDACFFVAGDPKKFASFSGAARTRI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ +CF F WI+DFPF+EWNEEEKK+DFAHNPF+MPQGG  +L   D LS+KAF
Sbjct: 419 GEELGLIDRDCFSFAWIVDFPFFEWNEEEKKLDFAHNPFSMPQGGENALDLQDPLSLKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG EIASGGIRNH  E+ML+ F  VG SKEVVE RFG LYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGCEIASGGIRNHSPEMMLKVFKLVGFSKEVVEERFGALYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDRIVMLL G KN+REVSLFPM+Q   DLLM +PS VS  QL +LG+RI    K
Sbjct: 539 AGIDRIVMLLQGVKNLREVSLFPMNQQALDLLMSAPSNVSAMQLCDLGIRIAPVVK 594


>gi|163868506|ref|YP_001609715.1| aspartyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|189082086|sp|A9IVI2|SYD_BART1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|161018162|emb|CAK01720.1| Aspartyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 597

 Score =  691 bits (1782), Expect = 0.0,   Method: Composition-based stats.
 Identities = 392/596 (65%), Positives = 488/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H C  L   DVG+ VRLSGWVHRVR HGGI+F+D+RDH+GITQ+VA+P S  F+
Sbjct: 1   MHRYRSHHCAALRKCDVGTKVRLSGWVHRVRDHGGILFVDLRDHFGITQIVADPASPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + VRSEWV+ +DG V +RS E INA + TG+IE+  Q++EILS +EELPLPVFGE +Y
Sbjct: 61  VIEKVRSEWVIRVDGEVCARSDEVINATLPTGEIEIFVQEVEILSKSEELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+T+HKNI++RT II +MR  M    F E STP+LTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTEIIAAMRRAMQNNGFTEFSTPLLTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRVHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+L TME ++R +FEEF+NG TV+ NF RI YD+AI++YG+DKPDLRNPIIM 
Sbjct: 241 MSFVEQEDVLATMEPIMRSIFEEFANGKTVTQNFPRISYDEAIQKYGSDKPDLRNPIIME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF +S F+VF++IL+ +   +VWAIPAK GG +RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 DVSQHFYNSGFKVFAQILADDENAQVWAIPAKTGG-SRAFCDRMNVWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E     G GP+AK++    TEA+R++L +++GD+CFF+AGDP KF SFA  AR  +
Sbjct: 360 WRKEEE-KFEGAGPIAKNIGEQRTEALRIQLGLENGDACFFVAGDPKKFASFAGAARTRV 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++  CF   WI+DFPF+EWNE+EKKIDFAHNPF+MPQGG  +L+  D L++KAF
Sbjct: 419 GEELDLVDRECFSLAWIVDFPFFEWNEDEKKIDFAHNPFSMPQGGENALECQDPLTLKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG+EIASGGIRNH+ E+ML+ F  VG+SK+VV++RFG LYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGYEIASGGIRNHLPEMMLKVFELVGLSKKVVKDRFGALYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDRI+MLL G KN+REV+LFPM+Q   DLLM +PS VS  QLR+LG+R+    K
Sbjct: 539 AGIDRIIMLLQGVKNLREVALFPMNQQALDLLMNAPSDVSSTQLRDLGIRMAPTQK 594


>gi|319784194|ref|YP_004143670.1| aspartyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170082|gb|ADV13620.1| aspartyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 598

 Score =  691 bits (1782), Expect = 0.0,   Method: Composition-based stats.
 Identities = 398/598 (66%), Positives = 487/598 (81%), Gaps = 2/598 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVGS VRLSGWVHRVR HGG++F+D+RD+YG+TQ+VA+PDS  F+
Sbjct: 3   MHRYRSHTCAQLRKSDVGSTVRLSGWVHRVRDHGGLLFIDLRDNYGLTQIVADPDSPAFK 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R  ET NAN+ TG+IE+ A++IE+LS A+ELPLPVFGE +Y
Sbjct: 63  VAETVRGEWVIRVDGEVKARLPETTNANLPTGEIEIFAREIEVLSAAKELPLPVFGEPDY 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II  MR RM    F E STPILTASSPEGARDF
Sbjct: 123 PEDIRLKYRFLDLRRETLHKNIIARTKIIAEMRKRMGEVGFTEFSTPILTASSPEGARDF 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 183 LVPSRIHPGTFYALPQAPQQYKQLIMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 242

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD+L+TME V+RGVFE F+NG  V+ NF RI YD A+R+YG+DKPDLRNPI M 
Sbjct: 243 MSFVEQDDVLSTMEPVMRGVFETFANGKPVTQNFQRIPYDVAMRKYGSDKPDLRNPIEMQ 302

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F+VF+ IL+ +P  EVW IPAK GG +RAFCDRMN WA+ +GQPGL YIF
Sbjct: 303 AVSDHFRDSGFKVFANILANDPKAEVWGIPAKTGG-SRAFCDRMNSWAQGEGQPGLGYIF 361

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    + G GP+AK++    TEAIR++L + DGD+ FF+AGDP KF SFA  AR   
Sbjct: 362 WRKEGD-KLEGAGPLAKNIGEERTEAIRLQLGLADGDAAFFVAGDPKKFVSFAGAARTRA 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++   FE CWI+DFPF+EWNEEEKKIDFAHNPF+MPQGG+++L G DLL IKAF
Sbjct: 421 GEELNLVDRERFELCWIVDFPFFEWNEEEKKIDFAHNPFSMPQGGIDALNGEDLLGIKAF 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASGGIRNH+ E M++AF  VG+ +  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 481 QYDMVCNGFEIASGGIRNHLPETMVKAFETVGLDRATVEERFGGLYRAFQYGAPPHGGMA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           AG+DR+VMLLLGAKN+RE+++FPM+Q   DLLM +PS  S +QLR+L LR+    K  
Sbjct: 541 AGVDRVVMLLLGAKNLREITMFPMNQQAYDLLMNAPSEASPQQLRDLALRVAVPRKDA 598


>gi|153009868|ref|YP_001371083.1| aspartyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|166225369|sp|A6X200|SYD_OCHA4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|151561756|gb|ABS15254.1| aspartyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 595

 Score =  690 bits (1781), Expect = 0.0,   Method: Composition-based stats.
 Identities = 386/596 (64%), Positives = 485/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+L+ A+ELPLPVFGE +Y
Sbjct: 61  VAETVRGEWVIRVDGEVKARAGDAVNTNLPTGEVEIFATEIEVLAAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM    F E +TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+++G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHEGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+++  TME V+RG+FEEF+ G  V+  F RI YDDAIR YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTQQFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ +P  EVWAIPAK GG +RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 AVTEHFAGSGFKVFANMIANDPKVEVWAIPAKTGG-SRAFCDRMNSWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    + G GP+AK++    TEAIR ++ ++DGD+CFF+AG P KF  FA DAR   
Sbjct: 360 WRKEGD-KLEGAGPIAKNIGEERTEAIRTQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+ KK+DFAHNPF+MPQGGM++L+  D L+IKA+
Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKLDFAHNPFSMPQGGMDALENQDPLAIKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN + +VM++AF  VG+S++ VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGSIRNQLPDVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDR++MLL+GAKN+RE+SLFPM+Q   DLLM +PS VS  QLR+L +R+    K
Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMNAPSDVSPAQLRDLHIRLAPVQK 594


>gi|222148190|ref|YP_002549147.1| aspartyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|254781709|sp|B9JV61|SYD_AGRVS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|221735178|gb|ACM36141.1| aspartyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 601

 Score =  690 bits (1780), Expect = 0.0,   Method: Composition-based stats.
 Identities = 391/601 (65%), Positives = 482/601 (80%), Gaps = 5/601 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SDVG+ VRLSGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDVGATVRLSGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDG+V +R+ ET+N  + TG+IEL AQ+IEIL+VA+ELPLPVFGE +Y
Sbjct: 61  LAETVRGEWVIRIDGVVKARADETVNKAMQTGEIELYAQEIEILAVAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRF+DLRR+TLHKNIVKRT+II+SMR  M    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFIDLRRETLHKNIVKRTQIISSMRNGMSELGFAEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+++G F+ALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHEGQFFALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+  TME ++  VFE+F+ G  V+  + RI YD+AIR+YG+DKPDLRNPI+M 
Sbjct: 241 MSFVTQEDVWTTMEPMMTKVFEQFAEGKPVTKQWPRIPYDEAIRKYGSDKPDLRNPIVMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG----GGGNRAFCDRMNEWARSQGQPGL 356
            VTEHF  S F++F+ +++ NP  EVWAIP K     G   RA CDRMN WA+S GQPGL
Sbjct: 301 AVTEHFADSGFKIFASMIAANPKVEVWAIPVKHTEATGAIGRAVCDRMNAWAQSTGQPGL 360

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            YIFW+ +E G VAG GP+AK++    T AI  +L +  GD+CFF+AGDP KF  FA +A
Sbjct: 361 GYIFWK-EEDGKVAGSGPLAKNIGEERTAAIAAQLGLGAGDACFFVAGDPAKFYKFAGEA 419

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R    +EL +I+ + FE CWI+DFPFYEW+EEEKKIDFAHNPF+MPQGG+E+    D L+
Sbjct: 420 RTRAGEELNLIDRDRFEMCWIVDFPFYEWSEEEKKIDFAHNPFSMPQGGLEAFDSQDPLT 479

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +KA+QYD VCNGFEIASG IRN   E+M++AF  VG+S+  VE RFGGLYRAFQ G PPH
Sbjct: 480 LKAYQYDAVCNGFEIASGSIRNQSPELMVKAFEKVGLSQTDVEERFGGLYRAFQYGAPPH 539

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG A GIDR+VMLL+GAKN+RE+SLFPM+Q   DLLMG+P+  +  QLREL LR+V  PK
Sbjct: 540 GGCAFGIDRVVMLLVGAKNLREISLFPMNQQAQDLLMGAPAPATPTQLRELALRVVPTPK 599

Query: 597 K 597
           K
Sbjct: 600 K 600


>gi|319408645|emb|CBI82300.1| Aspartyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 596

 Score =  688 bits (1776), Expect = 0.0,   Method: Composition-based stats.
 Identities = 385/596 (64%), Positives = 479/596 (80%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L   DVG  VRLSGWV+RVR HGGI+F+D+RDH+GITQ+V +P S  F+
Sbjct: 1   MHRYRSHNCAALRKCDVGIQVRLSGWVYRVRDHGGILFIDLRDHFGITQIVVDPHSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR+E V+ +DG V +R+ E INA + TG++E+ A ++EILS ++ELPLPVFGE +Y
Sbjct: 61  TVEKVRAESVIRVDGEVRARADEVINATLPTGEVEVFASEVEILSKSDELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR T+HKNI++RT II S+R  M    F E +TP+LTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRTTMHKNIMRRTEIIASIRKHMQNCAFTEFTTPLLTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+L TME ++R VFEEF++G  V+ +F RI YD+AI++YG+DKPDLRNPIIM 
Sbjct: 241 MSFVEQEDVLATMEPIIRSVFEEFADGKCVTQSFPRISYDEAIQKYGSDKPDLRNPIIME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF  S F+VF++IL+ +   +VWAIPAK GG +R+FCDRMN WA+ +GQPGL YIF
Sbjct: 301 SVSQHFYDSGFKVFAQILANDKHAQVWAIPAKTGG-SRSFCDRMNAWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E+G   G GP+AK++    TEAIR +L ++ GD+CFF+AG+P KF SFA  AR  +
Sbjct: 360 WRQ-ENGVFEGAGPIAKNIGEQRTEAIRAQLGLESGDACFFVAGNPKKFASFAGAARTRV 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+  CF   WI+DFPF+EWNE+EKK+DFAHNPF+MPQGG E++   D L+IKAF
Sbjct: 419 GEELDLIDHKCFSLAWIVDFPFFEWNEDEKKLDFAHNPFSMPQGGKEAIDCQDPLTIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG+EIASGGIRNH  E+ML+ F   G+S+EVVE RFGGLYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKIFKLAGLSEEVVEERFGGLYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDRIVMLL G KN+RE+SLFPM+Q   DLLM +PS VS  QL +LG+RIV   K
Sbjct: 539 AGIDRIVMLLQGVKNLREISLFPMNQQALDLLMSAPSEVSALQLSDLGIRIVRTAK 594


>gi|239831579|ref|ZP_04679908.1| aspartyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239823846|gb|EEQ95414.1| aspartyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 648

 Score =  688 bits (1776), Expect = 0.0,   Method: Composition-based stats.
 Identities = 385/596 (64%), Positives = 483/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS  F+
Sbjct: 54  MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 113

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R+ + +NAN+ TG++E+ A +IE+L+ A+ELPLPVFGE +Y
Sbjct: 114 VAETVRGEWVIRVDGEVKARADDAVNANLPTGEVEIFATEIEVLAAAKELPLPVFGEPDY 173

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM    F E +TPILTASSPEGARDF
Sbjct: 174 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFTTPILTASSPEGARDF 233

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 234 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 293

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+++  TME V+RG+FEEF+ G  V+  F RI YDDAIR YG+DKPDLRNPI M 
Sbjct: 294 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTQKFRRIAYDDAIRTYGSDKPDLRNPIEMQ 353

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ +P  EVWAIPAK GG +RAFCDRMN WA+ +GQPGL YIF
Sbjct: 354 AVTEHFAGSGFKVFANMIANDPKVEVWAIPAKTGG-SRAFCDRMNSWAQGEGQPGLGYIF 412

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    + G GP+AK++    TEA+R +L + DGD+CFF+AG P KF  FA DAR   
Sbjct: 413 WRKEGD-KLEGAGPIAKNIGEERTEALRNQLGLGDGDACFFVAGLPSKFYKFAGDARTRA 471

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+ KK+DFAHNPF+MPQGGM++L+  D L+IKA+
Sbjct: 472 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKLDFAHNPFSMPQGGMDALENQDPLAIKAY 531

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN + +VM++AF  VG+S++ VE RFGGLYRAFQ G PPHGG+A
Sbjct: 532 QYDLVCNGFEIASGSIRNQLPDVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 591

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDR++MLL+GAKN+RE+SLFPM+Q   DLLM +PS V+  QLR+L +R+    K
Sbjct: 592 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMNAPSDVTPAQLRDLHIRLAPVQK 647


>gi|49474342|ref|YP_032384.1| aspartyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|62287556|sp|Q6FZI4|SYD_BARQU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|49239846|emb|CAF26239.1| Aspartyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 597

 Score =  687 bits (1774), Expect = 0.0,   Method: Composition-based stats.
 Identities = 385/596 (64%), Positives = 483/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L   DVG  VRLSGWVHRVR HGGI+F+D+RDH+GITQ+VANP S  FE
Sbjct: 1   MHRYRSHNCAALRKHDVGKHVRLSGWVHRVRDHGGILFVDLRDHFGITQIVANPASPAFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + VRSEWV+ +DG V +RS E IN  + TG+IE+  +++EILS ++ELPLPVFGE +Y
Sbjct: 61  IIEKVRSEWVIRVDGEVCARSDEVINTVLPTGEIEIFVKEVEILSKSDELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+T+HKNI++RT II ++R  M    F E +TP+LTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETMHKNIMRRTEIITAIRRSMQNNGFTEFTTPLLTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+  TME ++R +FEEF+NG  V+ NF RI YD+AI++YG+DKPDLRNPIIM 
Sbjct: 241 MSFVEQEDVFVTMEPIMRSIFEEFANGKPVTQNFPRISYDEAIKKYGSDKPDLRNPIIMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF  S F++F++IL+ +   +VWAIPAK GG +RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 DVSQHFYDSCFKIFAQILTNDENAQVWAIPAKTGG-SRAFCDRMNLWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E G   G GP+AK++    TEA+R++L ++ GD+CFFIAG+P KF +FA   R  I
Sbjct: 360 WR-EEEGKFEGAGPIAKNIGEQRTEALRIQLGLESGDACFFIAGNPKKFSTFAGAVRTRI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+  CF   WI+DFPF+EWNE+EKK+DFAHNPF+MPQGG  +L+  D L++KAF
Sbjct: 419 GEELDLIDRECFSLAWIVDFPFFEWNEDEKKLDFAHNPFSMPQGGKNALECQDPLTLKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG+EIASGGIRNH  E+ML+ F+  G+S+EVVE+RFG LYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKVFNLAGLSREVVEDRFGALYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AG+DRI+MLL G KN+RE++LFPM+Q   DLLM +PS VS  QLR+LG+R+    K
Sbjct: 539 AGVDRIIMLLQGVKNLREIALFPMNQQALDLLMSAPSDVSSAQLRDLGIRVAPAAK 594


>gi|254718870|ref|ZP_05180681.1| aspartyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265983855|ref|ZP_06096590.1| aspartyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306837627|ref|ZP_07470497.1| aspartyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|306842000|ref|ZP_07474674.1| aspartyl-tRNA synthetase [Brucella sp. BO2]
 gi|264662447|gb|EEZ32708.1| aspartyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306287928|gb|EFM59345.1| aspartyl-tRNA synthetase [Brucella sp. BO2]
 gi|306407276|gb|EFM63485.1| aspartyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 595

 Score =  687 bits (1773), Expect = 0.0,   Method: Composition-based stats.
 Identities = 389/596 (65%), Positives = 484/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y
Sbjct: 61  VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+++  TME V+RG+FEEF+ G  V+  F RI YDDAIR YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VT+HF  S F+VF+ +++ +P  EVWAIPAK GG +RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 AVTDHFAGSGFKVFANMIANDPKVEVWAIPAKTGG-SRAFCDRMNSWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    + G GP+AK++    TEAIR ++ ++DGD+CFF+AG P KF  FA DAR   
Sbjct: 360 WRKEGD-KLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+ KK+DFAHNPF+MPQGGM++L+  D L IKA+
Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKLDFAHNPFSMPQGGMDALENMDPLEIKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN + EVM++AF  VG+S++ VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDR++MLL+GAKN+RE+SLFPM+Q   DLLMG+PS VS  QLR+L +R+    K
Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSDVSPAQLRDLHVRLAPVQK 594


>gi|300024344|ref|YP_003756955.1| aspartyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526165|gb|ADJ24634.1| aspartyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 603

 Score =  687 bits (1772), Expect = 0.0,   Method: Composition-based stats.
 Identities = 382/602 (63%), Positives = 469/602 (77%), Gaps = 8/602 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +HRYR+H+CG L  ++VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQVVA+PDSA F+
Sbjct: 6   LHRYRSHTCGALRKANVGETVRLSGWVHRVRDHGGVLFIDLRDHYGVTQVVADPDSAAFK 65

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VRSEWV+ +DG V  R   T+N  + TG+IEL A +IE+LS A+ELP+PVFGE +Y
Sbjct: 66  AAEAVRSEWVIRVDGKVRDRPDGTVNGELPTGEIELYATEIEVLSAAKELPVPVFGEPDY 125

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+TLH  I+KR  I  ++R RM    F E  TPILTASSPEGARDF
Sbjct: 126 PEDLRLQYRFLDLRRETLHAIIMKRLEITRAIRKRMHDAGFNEFPTPILTASSPEGARDF 185

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+++G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 186 LVPSRIHEGKFYALPQAPQQYKQLLMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 245

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+ +TME VL G+FEEF+NG  V+NN+ RI YD AI +YG+DKPDLRNPI M 
Sbjct: 246 MSFVEQEDVFSTMEPVLTGLFEEFANGKPVTNNWPRIPYDTAIAKYGSDKPDLRNPIEMQ 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VTEHF  S F+VF+ ++  +P   VWAIPA  GG +RAFCDRMN WA+ +GQPGL YIF
Sbjct: 306 DVTEHFRGSGFKVFAGMIEKDPKVRVWAIPAPTGG-SRAFCDRMNSWAQGEGQPGLGYIF 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G     GP+AK++      AI+ +L ++DGD+ FF AG+P  F  FA  AR+  
Sbjct: 365 WRDGEDGG---AGPIAKNIGPERAGAIKAQLSLKDGDAVFFTAGNPANFYKFAGAARDRA 421

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDLLS 476
            QEL ++  + +   WI+DFPFYEWNEEEKKIDF+HNPF+MPQGG E+L       D L 
Sbjct: 422 GQELKLVKEDQYALAWIVDFPFYEWNEEEKKIDFSHNPFSMPQGGGEALDAATTNEDRLK 481

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +KA+QYD+VCNG+EIASGGIRNH  EVM++AF   G+  EVVE RFGGL+RAFQ G PPH
Sbjct: 482 LKAYQYDIVCNGYEIASGGIRNHKPEVMIKAFGIAGLGPEVVEQRFGGLFRAFQYGAPPH 541

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+AAGI+RIVMLL G K VREV+LFPM+Q   DLLMG+PS V+ +QLREL LR+V   K
Sbjct: 542 GGMAAGIERIVMLLTGGKTVREVALFPMNQQANDLLMGAPSDVTPKQLRELSLRVVAPEK 601

Query: 597 KI 598
           K 
Sbjct: 602 KA 603


>gi|197105320|ref|YP_002130697.1| aspartyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|238690158|sp|B4RCT1|SYD_PHEZH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|196478740|gb|ACG78268.1| aspartyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 592

 Score =  686 bits (1771), Expect = 0.0,   Method: Composition-based stats.
 Identities = 345/597 (57%), Positives = 437/597 (73%), Gaps = 7/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  SD GS VRLSGWVHR R HGG+IF+D+RDHYG+TQ+V +P +  F+
Sbjct: 1   MHLYRTHTCGQLRASDTGSKVRLSGWVHRKRDHGGLIFIDLRDHYGLTQLVVSPSTPGFD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + VR+E V+ +DG V++RSAET+N N+ TG+IE+  +++E+LS A ELPLPVFGE EY
Sbjct: 61  LVEHVRAESVIRVDGEVVARSAETVNPNLPTGEIEVVVRQVEVLSEAAELPLPVFGEPEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYR+LDLRR+TLH+NIV R+++I S+R RMI + F+E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRYLDLRRETLHRNIVLRSQVIQSIRRRMIDQGFLEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++   FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRLHPTKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADRSL-EFYQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV QDD+   +E V+ GVF EF          F RI Y +AI +YG+DKPDLRNPI M
Sbjct: 240 MSFVTQDDVFAAIEPVMHGVFTEFGEGKPVTPYPFPRIPYREAIAKYGSDKPDLRNPIEM 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V+EHF    F +F++IL  +    VWAIP   GG +RAFCDRMN WA+ +GQPGL YI
Sbjct: 300 QDVSEHFRGGGFGLFARILE-DAKNAVWAIPGPKGG-SRAFCDRMNSWAQGEGQPGLGYI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FW  D+ G     GP+AK+L    T+ +   L +  GD+ FF+AGDP  F  FA  AR  
Sbjct: 358 FWSDDQGG---WGGPIAKNLGPEKTDGLMKALGLGQGDAAFFVAGDPKVFYKFAGAARTK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +L +I+   FEFCWI+DFP +EW++EEKK DF+HNPF+MPQG +++L   +   I A
Sbjct: 415 VGTDLKLIDEGRFEFCWIVDFPMFEWSDEEKKYDFSHNPFSMPQGELDALLNKEPGEIVA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E+ SG IRNH  +VML+AF   G   EVVE +FGG+  AF+ G PPHGG+
Sbjct: 475 YQYDIVCNGHELCSGAIRNHRPDVMLKAFEIAGYGPEVVEEQFGGMLNAFRHGAPPHGGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A GIDRIVMLL G   +REV  FP++Q   DLLM +PS VS +QL+EL +R+    K
Sbjct: 535 APGIDRIVMLLAGETAIREVIAFPLNQQGQDLLMNAPSEVSEKQLKELHIRLAPPIK 591


>gi|17987485|ref|NP_540119.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|23501638|ref|NP_697765.1| aspartyl-tRNA synthetase [Brucella suis 1330]
 gi|148560265|ref|YP_001258732.1| aspartyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|161618720|ref|YP_001592607.1| aspartyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|163843023|ref|YP_001627427.1| aspartyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|225627252|ref|ZP_03785289.1| aspartyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|225852268|ref|YP_002732501.1| aspartyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|254704077|ref|ZP_05165905.1| aspartyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|254707022|ref|ZP_05168850.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254709869|ref|ZP_05171680.1| aspartyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254713870|ref|ZP_05175681.1| aspartyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254717073|ref|ZP_05178884.1| aspartyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|256031361|ref|ZP_05444975.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256044441|ref|ZP_05447345.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256060871|ref|ZP_05451031.1| aspartyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|256113285|ref|ZP_05454153.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|256159483|ref|ZP_05457251.1| aspartyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256254769|ref|ZP_05460305.1| aspartyl-tRNA synthetase [Brucella ceti B1/94]
 gi|256264224|ref|ZP_05466756.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|260168495|ref|ZP_05755306.1| aspartyl-tRNA synthetase [Brucella sp. F5/99]
 gi|260563792|ref|ZP_05834278.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260566675|ref|ZP_05837145.1| aspartyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261218884|ref|ZP_05933165.1| aspartyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261221948|ref|ZP_05936229.1| aspartyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261314490|ref|ZP_05953687.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317410|ref|ZP_05956607.1| aspartyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261321617|ref|ZP_05960814.1| aspartyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261324868|ref|ZP_05964065.1| aspartyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261754735|ref|ZP_05998444.1| aspartyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261757963|ref|ZP_06001672.1| aspartyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988447|ref|ZP_06101004.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265990861|ref|ZP_06103418.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994697|ref|ZP_06107254.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265997911|ref|ZP_06110468.1| aspartyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|294852116|ref|ZP_06792789.1| aspartyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|54039650|sp|P67013|SYD_BRUSU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|54042025|sp|P67012|SYD_BRUME RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225324|sp|A5VPT5|SYD_BRUO2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189082087|sp|A9MAD3|SYD_BRUC2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189082088|sp|B0CL77|SYD_BRUSI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781720|sp|C0RI89|SYD_BRUMB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|17983182|gb|AAL52383.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|23347556|gb|AAN29680.1| aspartyl-tRNA synthetase [Brucella suis 1330]
 gi|148371522|gb|ABQ61501.1| aspartyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|161335531|gb|ABX61836.1| aspartyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|163673746|gb|ABY37857.1| aspartyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|225617257|gb|EEH14302.1| aspartyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|225640633|gb|ACO00547.1| aspartyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|260153808|gb|EEW88900.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260156193|gb|EEW91273.1| aspartyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|260920532|gb|EEX87185.1| aspartyl-tRNA synthetase [Brucella ceti B1/94]
 gi|260923973|gb|EEX90541.1| aspartyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294307|gb|EEX97803.1| aspartyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261296633|gb|EEY00130.1| aspartyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261300848|gb|EEY04345.1| aspartyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261303516|gb|EEY07013.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261737947|gb|EEY25943.1| aspartyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261744488|gb|EEY32414.1| aspartyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|262552379|gb|EEZ08369.1| aspartyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|262765810|gb|EEZ11599.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263001645|gb|EEZ14220.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094470|gb|EEZ18292.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|264660644|gb|EEZ30905.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|294820705|gb|EFG37704.1| aspartyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|326408774|gb|ADZ65839.1| aspartyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538492|gb|ADZ86707.1| aspartyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 595

 Score =  686 bits (1770), Expect = 0.0,   Method: Composition-based stats.
 Identities = 389/596 (65%), Positives = 483/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y
Sbjct: 61  VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+++  TME V+RG+FEEF+ G  V+  F RI YDDAIR YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VT+HF  S F+VF+ +++ +   EVWAIPAK GG +RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 AVTDHFAGSGFKVFANMIANDAKVEVWAIPAKTGG-SRAFCDRMNSWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    + G GP+AK++    TEAIR ++ ++DGD+CFF+AG P KF  FA DAR   
Sbjct: 360 WRKEGD-KLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+ KKIDFAHNPF+MPQGGM++L+  D L IKA+
Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSMPQGGMDALENMDPLEIKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN + EVM++AF  VG+S++ VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDR++MLL+GAKN+RE+SLFPM+Q   DLLMG+PS VS  QLR+L +R+    K
Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSEVSPAQLRDLHVRLAPVQK 594


>gi|110633475|ref|YP_673683.1| aspartyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|123162516|sp|Q11JA7|SYD_MESSB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110284459|gb|ABG62518.1| aspartyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 594

 Score =  686 bits (1769), Expect = 0.0,   Method: Composition-based stats.
 Identities = 387/594 (65%), Positives = 481/594 (80%), Gaps = 2/594 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C +L  SDVG  VRLSGWVHRVR HGG++F+D+RDHYGITQ+VA+PDS  F 
Sbjct: 1   MHRYRSHTCEELRPSDVGGTVRLSGWVHRVRDHGGLLFIDLRDHYGITQIVADPDSPSFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSEWV+ +DG V +R+ ET+N N+ TG +E+ A++IE+LS A+ELPLPVFGE +Y
Sbjct: 61  TAEKLRSEWVIRVDGEVKARTPETVNPNLATGGVEVFAREIEVLSQAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLH+NI+ RT+II  MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHRNILARTKIIAEMRKRMAESGFTEFSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQAPQ YKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRLHQGKFYALPQAPQIYKQLIMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ +TME V+RG+FE F+ G  V+    RI YD+A+R+YG+DKPDLRNPI+M 
Sbjct: 241 MSFVTQEDVFSTMEPVMRGIFEAFAEGKPVTQKLPRIPYDEAMRKYGSDKPDLRNPIVME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F+VF+ IL+ +P  EVWAIPAK GG +RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 EVSEHFRGSGFKVFANILANDPKAEVWAIPAKTGG-SRAFCDRMNSWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    + G GP+AK++    T+AIR +L + DGD+CFF+AGDP KF +FA  AR   
Sbjct: 360 WRKEGD-TLEGAGPIAKNIGPERTDAIRTQLGLGDGDACFFVAGDPKKFVAFAGAARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEWNE+EK+I+F HNPF+MPQGGME+L+  + LSIKAF
Sbjct: 419 GEELNLVDRDRFELAWIVDFPFYEWNEDEKRIEFGHNPFSMPQGGMEALENQEPLSIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASGGIRNHM E+M++AF   G  +++VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGGIRNHMPELMVKAFEVAGFDRQMVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           AGIDRIVMLL GAKN+RE+++FPM+Q   DLLMG+PS  + +QLREL +R+   
Sbjct: 539 AGIDRIVMLLRGAKNLREITMFPMNQQAMDLLMGAPSEATPQQLRELHIRLAPK 592


>gi|254701528|ref|ZP_05163356.1| aspartyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261752076|ref|ZP_05995785.1| aspartyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261741829|gb|EEY29755.1| aspartyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 595

 Score =  686 bits (1769), Expect = 0.0,   Method: Composition-based stats.
 Identities = 389/596 (65%), Positives = 483/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y
Sbjct: 61  VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+++  TME V+RG+FEEF+ G  V+  F RI YDDAIR YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VT+HF  S F+VF+ +++ +   EVWAIPAK GG +RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 AVTDHFAGSGFKVFANMIANDAKVEVWAIPAKTGG-SRAFCDRMNSWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    + G GP+AK++    TEAIR ++ ++DGD+CFF+AG P KF  FA DAR   
Sbjct: 360 WRKEGD-KLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+ KKIDFAHNPF+MPQGGM++L+  D L IKA+
Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSMPQGGMDALENMDPLEIKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN + EVM++AF  VG+S++ VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDR++MLL+GAKN+RE+SLFPM+Q   DLLMG+PS VS  QLR+L +R+    K
Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSEVSPAQLRDLHVRLASVQK 594


>gi|256369184|ref|YP_003106692.1| aspartyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|255999344|gb|ACU47743.1| aspartyl-tRNA synthetase [Brucella microti CCM 4915]
          Length = 595

 Score =  684 bits (1766), Expect = 0.0,   Method: Composition-based stats.
 Identities = 389/596 (65%), Positives = 483/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y
Sbjct: 61  VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+++  TME V+RG+FEEF+ G  V+  F RI YDDAIR YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VT+HF  S F+VF+ +++ +   EVWAIPAK GG +RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 AVTDHFARSGFKVFANMIANDAKVEVWAIPAKTGG-SRAFCDRMNSWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    + G GP+AK++    TEAIR ++ ++DGD+CFF+AG P KF  FA DAR   
Sbjct: 360 WRKEGD-KLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+ KKIDFAHNPF+MPQGGM++L+  D L IKA+
Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSMPQGGMDALENMDPLEIKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN + EVM++AF  VG+S++ VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDR++MLL+GAKN+RE+SLFPM+Q   DLLMG+PS VS  QLR+L +R+    K
Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSEVSPAQLRDLHVRLAPVQK 594


>gi|62289704|ref|YP_221497.1| aspartyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699634|ref|YP_414208.1| aspartyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189023954|ref|YP_001934722.1| aspartyl-tRNA synthetase [Brucella abortus S19]
 gi|237815193|ref|ZP_04594191.1| aspartyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|254689016|ref|ZP_05152270.1| aspartyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254697151|ref|ZP_05158979.1| aspartyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730047|ref|ZP_05188625.1| aspartyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256257266|ref|ZP_05462802.1| aspartyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260545540|ref|ZP_05821281.1| aspartyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260754509|ref|ZP_05866857.1| aspartyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260757730|ref|ZP_05870078.1| aspartyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260761555|ref|ZP_05873898.1| aspartyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883538|ref|ZP_05895152.1| aspartyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297248111|ref|ZP_06931829.1| aspartyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|81309434|sp|Q57DZ8|SYD_BRUAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|97196557|sp|Q2YNA7|SYD_BRUA2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238689357|sp|B2S501|SYD_BRUA1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62195836|gb|AAX74136.1| AspS, aspartyl-tRNA synthase [Brucella abortus bv. 1 str. 9-941]
 gi|82615735|emb|CAJ10731.1| Aspartyl-tRNA synthetase, class IIb:GAD domain:tRNA synthetase,
           class II (D, K and N):OB-fold nucleic acid binding
           domain:Asp [Brucella melitensis biovar Abortus 2308]
 gi|189019526|gb|ACD72248.1| aspartyl-tRNA synthetase [Brucella abortus S19]
 gi|237790030|gb|EEP64240.1| aspartyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260096947|gb|EEW80822.1| aspartyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260668048|gb|EEX54988.1| aspartyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260671987|gb|EEX58808.1| aspartyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674617|gb|EEX61438.1| aspartyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260873066|gb|EEX80135.1| aspartyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297175280|gb|EFH34627.1| aspartyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 595

 Score =  684 bits (1766), Expect = 0.0,   Method: Composition-based stats.
 Identities = 388/596 (65%), Positives = 483/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y
Sbjct: 61  VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+++  TME V+RG+FEEF+ G  V+  F RI YDDAIR YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VT+HF  S F+VF+ +++ +   EVWAIPAK GG +RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 AVTDHFAGSGFKVFANMIANDAKVEVWAIPAKTGG-SRAFCDRMNSWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    + G GP+AK++    TEAIR ++ ++DGD+CFF+AG P KF  FA DAR   
Sbjct: 360 WRKEGD-KLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+ KKIDFAHNPF++PQGGM++L+  D L IKA+
Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSLPQGGMDALENMDPLEIKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN + EVM++AF  VG+S++ VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDR++MLL+GAKN+RE+SLFPM+Q   DLLMG+PS VS  QLR+L +R+    K
Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSEVSPAQLRDLHVRLAPVQK 594


>gi|306843697|ref|ZP_07476297.1| aspartyl-tRNA synthetase [Brucella sp. BO1]
 gi|306276007|gb|EFM57716.1| aspartyl-tRNA synthetase [Brucella sp. BO1]
          Length = 595

 Score =  684 bits (1766), Expect = 0.0,   Method: Composition-based stats.
 Identities = 387/596 (64%), Positives = 482/596 (80%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y
Sbjct: 61  VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+++  TME V+ G+FEEF+ G  V+  F RI YDDAIR YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEEVWETMEPVMHGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VT+HF  S F+VF+ +++ +   EVWAIPAK GG +RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 AVTDHFAGSGFKVFANMIANDAKVEVWAIPAKTGG-SRAFCDRMNSWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    + G GP+AK++    TEAIR ++ ++DGD+CFF+AG P KF  FA DAR   
Sbjct: 360 WRKEGD-KLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+ KK+DFAHNPF+MPQGGM++L+  D L IKA+
Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKLDFAHNPFSMPQGGMDALENMDPLEIKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN + EVM++AF  VG+S++ VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDR++MLL+GAKN+RE+SLFPM+Q   DLLMG+PS VS  QLR+L +R+    K
Sbjct: 539 AGIDRVIMLLVGAKNLREISLFPMNQQALDLLMGAPSEVSPAQLRDLHVRLAPVQK 594


>gi|49475729|ref|YP_033770.1| aspartyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|62287557|sp|Q6G330|SYD_BARHE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|49238536|emb|CAF27772.1| Aspartyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 596

 Score =  684 bits (1765), Expect = 0.0,   Method: Composition-based stats.
 Identities = 384/596 (64%), Positives = 487/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H C  L   DVG   RLSGWVHRVR HGGI+F+D+RDH+GITQ+VA+P S  F+
Sbjct: 1   MHRYRSHHCAALRKCDVGIKARLSGWVHRVRDHGGILFVDLRDHFGITQIVADPASPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + VRSEWV+ +DG V +RS E IN ++ TG+IE+ A+++EILS ++ELPLPVFGE +Y
Sbjct: 61  IIEKVRSEWVIRVDGEVRARSDEVINTSLPTGEIEIFAKEVEILSKSDELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+T+H+NI++RT II ++R  M    F E +TP+LTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETMHRNIMRRTEIIAAIRRSMQENGFTEFTTPLLTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHQGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+L TME ++R +FEEF++G  V+ +F R+ Y++A+R+YG+DKPDLRNPIIM 
Sbjct: 241 MSFVEQEDVLVTMEPIMRSLFEEFADGKPVTQSFPRLSYEEAMRKYGSDKPDLRNPIIME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF  S F+VF++IL+ +    VWAIPAK GG +RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 DVSQHFYDSGFKVFAQILANDENARVWAIPAKTGG-SRAFCDRMNGWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E G   G GP+AK++    TEA+R++L +++GD+CFF+AGDP KF  FA  AR  +
Sbjct: 360 WR-EEQGKFEGAGPIAKNIGEQRTEALRMQLGLENGDACFFVAGDPKKFLPFAGAARTRV 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ +CF   WI+DFPF+EWNEEEKK+DFAHNPF+MPQGG ++L+  D L++KAF
Sbjct: 419 GEELDLVDRDCFSLAWIVDFPFFEWNEEEKKLDFAHNPFSMPQGGKDALECQDPLTLKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG+EIASGGIRNH  E+ML+ F+  G+SKEVVE+RFGGLYRAF  G PPHGG+A
Sbjct: 479 QYDLVCNGYEIASGGIRNHSPEMMLKVFNLAGLSKEVVEDRFGGLYRAFHYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AG+DRI+MLL G KN+REV+LFPM+Q   DLLM +PS VS  QLR+LG+RI    K
Sbjct: 539 AGVDRIIMLLQGVKNLREVALFPMNQQALDLLMSAPSDVSPVQLRDLGIRIAPAAK 594


>gi|163759181|ref|ZP_02166267.1| aspartyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162283585|gb|EDQ33870.1| aspartyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 595

 Score =  684 bits (1764), Expect = 0.0,   Method: Composition-based stats.
 Identities = 391/595 (65%), Positives = 484/595 (81%), Gaps = 2/595 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  SD G+ VRLSGWVHRVR HGG++F+D+RDHYG+TQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKSDTGANVRLSGWVHRVRDHGGVLFIDLRDHYGLTQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA++VR EWV+ IDG+V  R A+TIN N+ TG+IE+ AQ+IE+LS A+ELPLPVFGE +Y
Sbjct: 61  IAETVRGEWVIRIDGVVKERMADTINPNLGTGEIEVFAQEIEVLSSAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLHKNIV RT++I  MR RM    F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHKNIVTRTKVIADMRKRMTDIGFAEYATPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGQFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ +TME V+RGVFEEF+ G  V+  F RI YD+A+R+YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEDVWDTMEPVMRGVFEEFAEGKPVTQEFRRIPYDEAVRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ NP  EVWAIPAK GG +RAFCDRMN WA+ QGQPGL YIF
Sbjct: 301 AVTEHFAGSGFKVFAGMIANNPKVEVWAIPAKTGG-SRAFCDRMNSWAQGQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    + G GP+AK++    TEAIR+++ ++DGD+CFF AGDP KF  FA DAR   
Sbjct: 360 WRKEGD-TLEGAGPIAKNIGPERTEAIRLQMGLEDGDACFFAAGDPAKFARFAGDARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ N FE CWI+DFPFYEW+E+ KK++FAHNPF+MPQGGME+L+  D L++KA+
Sbjct: 419 GEELNLVDENRFELCWIVDFPFYEWDEDAKKVEFAHNPFSMPQGGMEALETQDPLTLKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN   E+M++AF  VG+S+  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGSIRNQSPELMVKAFEKVGLSQADVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           AG+DR++ML++GAKN+REV+LFPM+Q   DLLMG+PS  +  Q+REL LR +   
Sbjct: 539 AGVDRVIMLIVGAKNLREVALFPMNQQAQDLLMGAPSPAAPAQMRELSLRAIPPK 593


>gi|254693499|ref|ZP_05155327.1| aspartyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261213757|ref|ZP_05928038.1| aspartyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260915364|gb|EEX82225.1| aspartyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
          Length = 595

 Score =  683 bits (1762), Expect = 0.0,   Method: Composition-based stats.
 Identities = 387/596 (64%), Positives = 483/596 (81%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VRLSGWVHRVR HGGI+F+D+RDHYGITQ+VA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSNVRLSGWVHRVRDHGGILFIDLRDHYGITQIVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ +DG V +R+ + +N N+ TG++E+ A +IE+LS A+ELPLPVFGE +Y
Sbjct: 61  VAETVRGEWVIRVDGEVKARADDAVNTNLPTGEVEIFATEIEVLSPAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI+ RT+II +MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+++  TME V+RG+FEEF+ G  V+  F RI YDDAIR YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIRTYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VT+HF  S F+VF+ +++ +   EVWAIPAK GG +RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 AVTDHFAGSGFKVFANMIANDAKVEVWAIPAKTGG-SRAFCDRMNSWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    + G GP+AK++    TEAIR ++ ++DGD+CFF+AG P KF  FA DAR   
Sbjct: 360 WRKEGD-KLEGAGPIAKNIGEERTEAIRKQMGLEDGDACFFVAGLPSKFYKFAGDARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+ KKIDFAHNPF++PQGGM++L+  D L IKA+
Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSLPQGGMDALENMDPLEIKAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN + EVM++AF  VG+S++ VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDLVCNGFEIASGSIRNQLPEVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDR++MLL+GAKN+RE+S+FPM+Q   DLLMG+PS VS  QLR+L +R+    K
Sbjct: 539 AGIDRVIMLLVGAKNLREISVFPMNQQALDLLMGAPSEVSPAQLRDLHVRLAPVQK 594


>gi|304391963|ref|ZP_07373905.1| aspartyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303296192|gb|EFL90550.1| aspartyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 594

 Score =  681 bits (1757), Expect = 0.0,   Method: Composition-based stats.
 Identities = 379/591 (64%), Positives = 472/591 (79%), Gaps = 2/591 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C DL  S+VG  VRLSGWVHRVR HGG++F+D+RDHYGITQVV +PDS  F+
Sbjct: 1   MHRYRSHTCADLRASNVGDTVRLSGWVHRVRDHGGVLFIDLRDHYGITQVVIDPDSNGFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ VRSEWV+C++G V +R+ ET+N+++ TG IE+ A++IE+LS A ELP+PVFGE+EY
Sbjct: 61  TAEDVRSEWVICLEGNVKARTEETVNSDLPTGDIEIYAREIEVLSQAAELPMPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLH NI+KR  +I+ MR RM    F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHANIMKRQAVISDMRSRMETAGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGNFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+L TME V+  VFE+F++G TV+ N+ RI Y +AIR+YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVLTTMEPVITEVFEQFADGKTVTKNWPRIPYREAIRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+EHF  S F+VF+ IL  +   EVWAIP KG G +R  CDRMN WA+ +GQPG+ YIF
Sbjct: 301 NVSEHFRGSGFKVFAGILDADDNNEVWAIPVKGAG-SRKHCDRMNSWAQGEGQPGMGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G     GP+AK++    TEA+R +L ++ GD+ FF AG+P KF SFA DAR   
Sbjct: 360 WRELE-GKFDAAGPIAKNIGPERTEAMREQLGLELGDAVFFAAGNPAKFASFAGDARTKA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+E G+IN N FE CWI+DFPFYEW+EE KK++F HNPF+MP+GG+++L   D L I A 
Sbjct: 419 AEEAGLINENAFELCWIVDFPFYEWDEENKKVEFGHNPFSMPKGGIDALNNEDPLKIDAM 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASGGIRNH+ E M++AF   G+S+  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDMVCNGFEIASGGIRNHLPETMVKAFGITGLSQADVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVML+ G KN+RE+++FPM+Q   DLLMG+PS V   QL++L L++
Sbjct: 539 AGVDRIVMLICGTKNLREITMFPMNQQAKDLLMGAPSAVDKPQLKDLHLKL 589


>gi|254473442|ref|ZP_05086839.1| aspartyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211957558|gb|EEA92761.1| aspartyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 594

 Score =  681 bits (1756), Expect = 0.0,   Method: Composition-based stats.
 Identities = 377/591 (63%), Positives = 469/591 (79%), Gaps = 2/591 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  ++VG   RLSGWVHRVR HGG++F+D+RDHYGITQ V +PDSA F+
Sbjct: 1   MHRYRSHTCGELRANNVGETTRLSGWVHRVRDHGGLLFIDLRDHYGITQCVVDPDSAAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VRSEW + IDG V  RS ETIN N+ TG+IE+  + +E+L  ++ELPLPVFGE EY
Sbjct: 61  LAETVRSEWCIRIDGDVKKRSDETINENLGTGEIEIFIRDMEVLGDSQELPLPVFGELEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRRDTLH N++KRT+IINSMR RM    F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRDTLHANLMKRTKIINSMRKRMNDAEFNEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQFKQLLMMSGFDKYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+L TME V+RGVFEEFS G  V+  F RI Y +AIR+YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEDVLQTMEPVIRGVFEEFSEGKPVTKEFPRIPYAEAIRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF++++  +P  +VWAIPA  GG +RAFCDRMN WA+S+GQPGL YIF
Sbjct: 301 EVTEHFAGSGFKVFARMIESDPKVQVWAIPAPKGG-SRAFCDRMNSWAQSEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +R +E   +AG GP+AK++    TEA+R +L + +GD+ FF AGDP KF  FA  AR   
Sbjct: 360 FRKEED-TIAGAGPIAKNIGAERTEAVRTQLGLDEGDAVFFAAGDPKKFADFAGKARTRA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I+ + F  CWI+DFP YEW+EE KK+DF HNPF+MP+GGM+ L   + L + A+
Sbjct: 419 AEELNLIDEDQFALCWIVDFPMYEWDEENKKVDFCHNPFSMPEGGMDGLTNVEPLELNAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG+EI SG IRNH  EVM +AF   G  + ++E +FGG+YRAFQ G PPHGG+A
Sbjct: 479 QYDVVCNGYEIGSGAIRNHQVEVMKKAFEIAGYDESLLEEKFGGMYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL+GAKN+REV+LFPM+Q   DL+MG+PS V   QLR+L +R+
Sbjct: 539 AGVDRIVMLLVGAKNLREVTLFPMNQQAQDLMMGAPSDVFPAQLRDLHIRL 589


>gi|312113634|ref|YP_004011230.1| aspartyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218763|gb|ADP70131.1| aspartyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 637

 Score =  677 bits (1747), Expect = 0.0,   Method: Composition-based stats.
 Identities = 371/598 (62%), Positives = 465/598 (77%), Gaps = 2/598 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +H YR+ +CG L  +D G  VRLSGWVHRVR HGG++F+D+RDHYG+TQ V +P +  F+
Sbjct: 42  LHAYRSTTCGALRRADAGKTVRLSGWVHRVRDHGGLLFIDLRDHYGLTQCVVDPSAPAFK 101

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VR+EWV+ IDG V+ R  +T+N N+ TG++E+    +++LS AEELPLPVFGE EY
Sbjct: 102 SAEAVRAEWVIRIDGDVVIREGDTVNPNLPTGEVEVRIGTLDVLSKAEELPLPVFGEPEY 161

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+TLH+NI++RT+II  MR RM+   F E STPILTASSPEGARDF
Sbjct: 162 PEDVRLRYRFLDLRRETLHRNIIQRTKIIADMRKRMVDAGFTEFSTPILTASSPEGARDF 221

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 222 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 281

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ +TME V+R VF+ F+ G  V++ F RI YDDAI +YGTDKPDLRNPI M 
Sbjct: 282 MSFVTQEDVWDTMEPVIRAVFDGFAGGKPVTDVFPRIAYDDAITKYGTDKPDLRNPIEMQ 341

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+ +L  +    VWAIP K GG +RAFCDRMN WA+ QGQPGL YIF
Sbjct: 342 DVSEHFRGSGFKVFAGMLEKDKKARVWAIPGKTGG-SRAFCDRMNSWAQQQGQPGLGYIF 400

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    + G GPVAK++    T AI  +L + DGD+ FF+ GDP KF  FA +AR  +
Sbjct: 401 WRKEGDA-LEGAGPVAKNIGPERTAAIAAQLGVGDGDAVFFVGGDPAKFYKFAGEARTRV 459

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEWNE+EKK+DFAHNPF+MPQGG+E+L+  D L +KA+
Sbjct: 460 GEELNLVDRDRFELAWIVDFPFYEWNEDEKKVDFAHNPFSMPQGGLEALETRDPLELKAY 519

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNGFEIASG IRN   E M+ AF  VG++K  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 520 QYDLVCNGFEIASGSIRNQSPETMVTAFEKVGLTKADVEERFGGLYRAFQFGAPPHGGMA 579

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
            GIDRIVML+ GAKN+RE+SLFPM+Q   DLLMG+PS    +QLR+L +R+    K+ 
Sbjct: 580 FGIDRIVMLITGAKNLREISLFPMNQQAEDLLMGAPSEAGAKQLRDLHIRLNLPKKEA 637


>gi|328543994|ref|YP_004304103.1| Aspartyl-tRNA synthetase [polymorphum gilvum SL003B-26A1]
 gi|326413738|gb|ADZ70801.1| Aspartyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
          Length = 593

 Score =  675 bits (1742), Expect = 0.0,   Method: Composition-based stats.
 Identities = 372/591 (62%), Positives = 460/591 (77%), Gaps = 3/591 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CGDL  S  G   RLSGWVHRVR HGG++F+D+RDHYGITQ V +PDSA F+
Sbjct: 1   MHRYRSHTCGDLRASHAGETARLSGWVHRVRDHGGLLFIDLRDHYGITQCVVDPDSAAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VRSEW + IDG V  RSAET+N N+ TG+IEL  + +E+L  A ELPLPVFGE EY
Sbjct: 61  AAETVRSEWCIRIDGEVKRRSAETVNPNLPTGEIELFIRDLEVLGPARELPLPVFGEPEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R  YRFLDLRR+TLH+NI+ RT++I  +R RM    F E  TPILTASSPEGARDF
Sbjct: 121 PEDVRLTYRFLDLRRETLHRNIMTRTKVIADIRRRMGEIGFAEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV QDD+  TME V+RG+FE FS G  V+  F RI Y +AI +YGTDKPDLRNPI+M 
Sbjct: 241 MSFVTQDDLFATMEPVIRGLFETFSEGKPVTQAFPRIPYAEAIAKYGTDKPDLRNPIVMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+  F  S F++F+++L  +P   VWAIPA  GG +RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 DVSAQFADSGFKIFARMLE-DPKNRVWAIPAPKGG-SRAFCDRMNSWAQGEGQPGLGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E   + G GPVAK++    +EAIR +L + +GD+ FF AGDP KF  FA  AR  +
Sbjct: 359 WR-REGDVLEGAGPVAKNIGHERSEAIRAQLGLDEGDAVFFTAGDPKKFADFAGKARTRV 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ N FE  WI+DFP YEW+E+EKK++F+HNPF+MPQGG+E L+  D L + A+
Sbjct: 418 GEELDLIDQNRFELAWIVDFPMYEWDEDEKKVEFSHNPFSMPQGGLEGLETTDPLELNAY 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG+EIASG IRNH  E+M +AF+  G  + V+E RFGG+YRAFQ G PPHGG+A
Sbjct: 478 QYDMVCNGYEIASGAIRNHNPEIMKKAFAIAGYDETVLEERFGGMYRAFQYGAPPHGGMA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GIDRIVML +GAKN+REV+LFPM+Q   DLLMG+PS  + +QLREL +R+
Sbjct: 538 FGIDRIVMLFVGAKNLREVTLFPMNQQANDLLMGAPSEPTTKQLRELHIRL 588


>gi|85717197|ref|ZP_01048154.1| aspartyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85695977|gb|EAQ33878.1| aspartyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 594

 Score =  674 bits (1740), Expect = 0.0,   Method: Composition-based stats.
 Identities = 364/591 (61%), Positives = 460/591 (77%), Gaps = 2/591 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  S +   VRLSGW HR+R HGG++F+D+RDHYG+TQ VA+PDS  F 
Sbjct: 1   MHRYRSHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVADPDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSEWV+ IDG    R A T N  + TG +EL   +IE+L  A ELPLPVFGE+EY
Sbjct: 61  LAEKLRSEWVVRIDGKARRRPAGTENPELPTGNVELYVTEIEVLGPAAELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR++LH+NI+ R  I++SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRESLHQNIMTRGAIVDSMRRRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD+   +E V+ GVFEEF+ G  V+ N+ RI + DA+R+YGTDKPDLRNP++M 
Sbjct: 241 MSFVEQDDVFAAVEPVITGVFEEFAKGKPVTRNWPRIPFADAVRKYGTDKPDLRNPLLMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L  +   +VWAIP  GGG +RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLE-DSKNQVWAIPGPGGG-SRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E  +++G GP+A ++    TEA+RV+L ++ GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WREEEDKSISGAGPLANNIGPERTEAVRVQLGLKVGDAAFFVAGDPAKFWKFAGLARTRL 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + FE  WI+DFP YE+NEE+KK+DF+HNPF+MPQGG+++L   D L+I AF
Sbjct: 419 GEELNLIDKDRFELAWIVDFPMYEYNEEDKKVDFSHNPFSMPQGGLDALNTQDPLTINAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  +  V  RFGG+YRAFQ G PPHGG+A
Sbjct: 479 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGETEVVERFGGMYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLM +PS V+ +QLREL +R+
Sbjct: 539 AGVDRIVMLLCGTTNLREISLFPMNQQAEDLLMSAPSDVTPKQLRELHIRL 589


>gi|39936106|ref|NP_948382.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|62287570|sp|Q6N5D6|SYD_RHOPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|39649960|emb|CAE28484.1| aspartate-tRNA ligase [Rhodopseudomonas palustris CGA009]
          Length = 591

 Score =  674 bits (1739), Expect = 0.0,   Method: Composition-based stats.
 Identities = 363/597 (60%), Positives = 453/597 (75%), Gaps = 6/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  S +   VRLSGW HR+R HGG++F+D+RDHYG+TQ VA+PDS  F+
Sbjct: 1   MHRYRTHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R+EWV+ IDG V  R   T N ++ TG +E+   +IE+L  A ELPLPVFGE+EY
Sbjct: 61  DAEKLRAEWVVRIDGKVRRRPEGTDNPDLPTGAVEVFVTEIEVLGPAGELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ LH+NI+ R  I++SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDVRLRYRFLDLRREKLHQNIMTRGAIVDSMRRRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV QDDI   ME V+ GVFEEF+ G  V+  + RI + D++R+YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQDDIFAAMEPVITGVFEEFAKGKRVTKGWPRIAFADSMRKYGTDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L      +VWAIP  GGG +RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLEEQ-RNQVWAIPGPGGG-SRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G     GP+A ++    TEAIR  L ++ GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WREGGEG----AGPLANNIGPERTEAIRAALGLKAGDAAFFVAGDPSKFVKFAGLARTKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F   W++DFP YE+NE++KK+DF+HNPF+MPQGGME+L   D L+IKAF
Sbjct: 415 GEELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMEALTSQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS VS +QLREL +R+     K
Sbjct: 535 AGVDRIVMLLCGTTNLREISLFPMNQRAEDLLMGAPSEVSPKQLRELHIRLNLPDTK 591


>gi|192291824|ref|YP_001992429.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|238692580|sp|B3Q9Q1|SYD_RHOPT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|192285573|gb|ACF01954.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 591

 Score =  674 bits (1738), Expect = 0.0,   Method: Composition-based stats.
 Identities = 363/597 (60%), Positives = 453/597 (75%), Gaps = 6/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  S +   VRLSGW HR+R HGG++F+D+RDHYG+TQ VA+PDS  F+
Sbjct: 1   MHRYRTHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R+EWV+ IDG V  R   T N ++ TG +E+   +IE+L  A ELPLPVFGE+EY
Sbjct: 61  DAEKLRAEWVVRIDGKVRRRPEGTDNPDLPTGAVEVFVTEIEVLGPAGELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ LH+NI+ R  I++SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDVRLRYRFLDLRREKLHQNIMTRGAIVDSMRRRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV QDDI   ME V+ GVFEEF+ G  V+  + RI + D++R+YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQDDIFAAMEPVITGVFEEFAKGKRVTKGWPRIAFADSMRKYGTDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L      +VWAIP  GGG +RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLEEQ-RNQVWAIPGPGGG-SRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G     GP+A ++    TEAIR  L ++ GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WREGGEG----AGPLANNIGPERTEAIRTALGLKAGDAAFFVAGDPSKFVKFAGLARTKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F   W++DFP YE+NE++KK+DF+HNPF+MPQGGME+L   D L+IKAF
Sbjct: 415 GEELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMEALTSQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS VS +QLREL +R+     K
Sbjct: 535 AGVDRIVMLLCGTTNLREISLFPMNQRAEDLLMGAPSEVSPKQLRELHIRLNLPDTK 591


>gi|315499999|ref|YP_004088802.1| aspartyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315418011|gb|ADU14651.1| aspartyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 593

 Score =  673 bits (1737), Expect = 0.0,   Method: Composition-based stats.
 Identities = 344/597 (57%), Positives = 437/597 (73%), Gaps = 7/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  +D G+ VR+SGW+HR R HGG++F+D+RDHYG+TQ+V NPDSA F 
Sbjct: 1   MHSYRTHTCGALRATDAGAEVRVSGWIHRKRDHGGLLFIDLRDHYGLTQLVFNPDSAGFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +RSE V+ +DG V++R   T+N N+ TG IE+    IE+LS A ELPLPVFGE EY
Sbjct: 61  KVERLRSESVIRVDGKVVARDEATVNPNLPTGAIEVVVSDIEVLSEAAELPLPVFGEPEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR K RFLDLRR+TLHKNIV R+R+I S+R RM+A+ F+E  TPILTASSPEGARDF
Sbjct: 121 PEEIRLKNRFLDLRRETLHKNIVLRSRVIQSIRNRMVAQGFLEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRLHAGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADRSL-EFYQLDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+   +E V+ G+F EF       S  F RI Y ++I +YG+DKPDLRNPI M
Sbjct: 240 MSFVTQEDVFAAIEPVMHGLFTEFGEGKRVSSYPFQRIPYKESIAKYGSDKPDLRNPIEM 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V+EHF    F +F++IL  N    VWAIPA  GG +RAFCDRMN WA+ +GQPGL YI
Sbjct: 300 QDVSEHFRGGGFGLFARILE-NSANAVWAIPAPKGG-SRAFCDRMNSWAQGEGQPGLGYI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FW  D+    A  GP+AK+L    T A+   L +  GD+ FF+AGDP  F  FA  AR  
Sbjct: 358 FWSEDQG---AWGGPIAKNLGNEATTALMTALGLGQGDAAFFVAGDPKIFYKFAGLARTK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +L +++ + F FCWI+DFP +E+NE+EKK+DF+HNPF+MPQG ME+L   D L I A
Sbjct: 415 VGTDLNLVDEDQFRFCWIVDFPMFEYNEDEKKVDFSHNPFSMPQGEMEALLTKDPLDILA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG+E+ SG IRNH  E+ML+AF   G   +VVE++FGG+  AF+ G PPHGG+
Sbjct: 475 YQYDIVCNGYELCSGAIRNHKQEIMLKAFEIAGYGADVVESQFGGMLNAFKYGAPPHGGL 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A GIDRIVMLL G   +REV  FP++Q   D++M +PS V+ +QL+EL +R     K
Sbjct: 535 APGIDRIVMLLAGQTAIREVIAFPLNQQGQDVMMSAPSEVTEKQLKELHIRTQLPIK 591


>gi|316933726|ref|YP_004108708.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315601440|gb|ADU43975.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 591

 Score =  672 bits (1735), Expect = 0.0,   Method: Composition-based stats.
 Identities = 360/597 (60%), Positives = 453/597 (75%), Gaps = 6/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  S +   VRLSGW HR+R HGG++F+D+RDHYGITQ VA+PDS  F+
Sbjct: 1   MHRYRTHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGITQCVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R+EWV+ +DG V  R   T N ++ TG +E+   +IE+L  A ELPLPVFGE+EY
Sbjct: 61  DAEKLRAEWVVRMDGRVRRRPEGTENPDLPTGAVEVFVTEIEVLGPAGELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ LH+NI+ R  I++SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDVRLRYRFLDLRREKLHQNIMTRGAIVDSMRRRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+ Q+D+   ME V+ GVFEEF+ G  V+  + RI + D++R+YGTDKPDLRNPI M 
Sbjct: 241 MSFITQEDVFAAMEPVITGVFEEFAKGKRVTKGWPRIAFADSMRKYGTDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L      +VWAIP  GGG +RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLE-EERNQVWAIPGPGGG-SRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G     GP+A ++    TEAIR  L ++ GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WREGGEG----AGPLANNIGPERTEAIRAALGLKAGDAAFFVAGDPSKFVKFAGLARTKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F   W++DFP YE+NE++KK+DF+HNPF+MPQGGME+L   D L+IKAF
Sbjct: 415 GEELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMEALTSQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGEQEVIDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS VS +QLREL +R+     K
Sbjct: 535 AGVDRIVMLLCGTTNLREISLFPMNQRAEDLLMGAPSEVSPKQLRELHIRLNLPDAK 591


>gi|16126135|ref|NP_420699.1| aspartyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|24212419|sp|Q9A734|SYD_CAUCR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|13423341|gb|AAK23867.1| aspartyl-tRNA synthetase [Caulobacter crescentus CB15]
          Length = 609

 Score =  672 bits (1734), Expect = 0.0,   Method: Composition-based stats.
 Identities = 344/614 (56%), Positives = 442/614 (71%), Gaps = 24/614 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  SD G+ VRLSGW+HR R HGG++F+D+RDHYG+TQ+V +P++  F 
Sbjct: 1   MHAYRTHNCGALRASDTGAAVRLSGWIHRKRDHGGLVFIDLRDHYGLTQLVLHPETPGFN 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + +R+E V+ +DG V++R A  +N N+ TG+IE+    +E+LS A ELPLPVFGE +Y
Sbjct: 61  VVERLRAESVIRVDGEVIARDASVVNPNLPTGEIEIRVSAVEVLSEAAELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR K+R+LDLRR+TLHKNIV R+R+I S+R RM A+ F E  TPILTASSPEGARDF
Sbjct: 121 PEEIRLKHRYLDLRRETLHKNIVLRSRVIQSIRNRMFAQGFNEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++   FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRLHPEKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADRSL-EFYQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN------------------TVSNNFLRICYDDA 282
           MSFV Q+D+   +E V+ GVFEEFSNG                        F R+ Y  +
Sbjct: 240 MSFVTQEDVFAAIEPVMHGVFEEFSNGKPVSPINGTHTFTNDFGQSFEHKGFERLTYAQS 299

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +  YG+DKPDLRNPI M NV+EHF    F +F+KIL  +   +VWAIPA  GG +RAFCD
Sbjct: 300 MAWYGSDKPDLRNPIKMANVSEHFRDGGFGLFAKILGADAKNQVWAIPAPTGG-SRAFCD 358

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
           RMN WA+ +GQPGL Y+FW  D+ G     GP+AK+L    T+A+   L +  GD+ FF+
Sbjct: 359 RMNSWAQGEGQPGLGYVFWSEDQGG---WGGPIAKNLG-EPTQALMESLGLGAGDAAFFV 414

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           AGDP  F  FA  AR  +  EL +++ N F+FCWI+DFP +EWNEEEKK+DF+HNPF+MP
Sbjct: 415 AGDPAVFAKFAGLARTRVGTELKLVDENQFKFCWIVDFPMFEWNEEEKKVDFSHNPFSMP 474

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           QGG+E+L+  D L+I+A+QYD+VCNG+E+ SG IRNH  E+ML+AF+  G   EVVE +F
Sbjct: 475 QGGLEALETQDPLTIRAYQYDIVCNGYELCSGAIRNHKPEIMLKAFATAGYGPEVVEEQF 534

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           GG+  AF+ G PPHGG+A GIDRIVMLL     +REV  FP++Q   DLLM +P+ V  +
Sbjct: 535 GGMLNAFRYGAPPHGGLAPGIDRIVMLLADQVAIREVIAFPLNQQGQDLLMNAPANVLDK 594

Query: 583 QLRELGLRIVENPK 596
           QL+EL +R     K
Sbjct: 595 QLKELHIRTAPPIK 608


>gi|221234906|ref|YP_002517342.1| aspartyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|220964078|gb|ACL95434.1| aspartyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 612

 Score =  672 bits (1734), Expect = 0.0,   Method: Composition-based stats.
 Identities = 344/614 (56%), Positives = 442/614 (71%), Gaps = 24/614 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  SD G+ VRLSGW+HR R HGG++F+D+RDHYG+TQ+V +P++  F 
Sbjct: 4   MHAYRTHNCGALRASDTGAAVRLSGWIHRKRDHGGLVFIDLRDHYGLTQLVLHPETPGFN 63

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + +R+E V+ +DG V++R A  +N N+ TG+IE+    +E+LS A ELPLPVFGE +Y
Sbjct: 64  VVERLRAESVIRVDGEVIARDASVVNPNLPTGEIEIRVSAVEVLSEAAELPLPVFGEPDY 123

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR K+R+LDLRR+TLHKNIV R+R+I S+R RM A+ F E  TPILTASSPEGARDF
Sbjct: 124 PEEIRLKHRYLDLRRETLHKNIVLRSRVIQSIRNRMFAQGFNEFQTPILTASSPEGARDF 183

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++   FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 184 LVPSRLHPEKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADRSL-EFYQLDVE 242

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN------------------TVSNNFLRICYDDA 282
           MSFV Q+D+   +E V+ GVFEEFSNG                        F R+ Y  +
Sbjct: 243 MSFVTQEDVFAAIEPVMHGVFEEFSNGKPVSPINGTHTFTNDFGQSFEHKGFERLTYAQS 302

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +  YG+DKPDLRNPI M NV+EHF    F +F+KIL  +   +VWAIPA  GG +RAFCD
Sbjct: 303 MAWYGSDKPDLRNPIKMANVSEHFRDGGFGLFAKILGADAKNQVWAIPAPTGG-SRAFCD 361

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
           RMN WA+ +GQPGL Y+FW  D+ G     GP+AK+L    T+A+   L +  GD+ FF+
Sbjct: 362 RMNSWAQGEGQPGLGYVFWSEDQGG---WGGPIAKNLG-EPTQALMESLGLGAGDAAFFV 417

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           AGDP  F  FA  AR  +  EL +++ N F+FCWI+DFP +EWNEEEKK+DF+HNPF+MP
Sbjct: 418 AGDPAVFAKFAGLARTRVGTELKLVDENQFKFCWIVDFPMFEWNEEEKKVDFSHNPFSMP 477

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           QGG+E+L+  D L+I+A+QYD+VCNG+E+ SG IRNH  E+ML+AF+  G   EVVE +F
Sbjct: 478 QGGLEALETQDPLTIRAYQYDIVCNGYELCSGAIRNHKPEIMLKAFATAGYGPEVVEEQF 537

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           GG+  AF+ G PPHGG+A GIDRIVMLL     +REV  FP++Q   DLLM +P+ V  +
Sbjct: 538 GGMLNAFRYGAPPHGGLAPGIDRIVMLLADQVAIREVIAFPLNQQGQDLLMNAPANVLDK 597

Query: 583 QLRELGLRIVENPK 596
           QL+EL +R     K
Sbjct: 598 QLKELHIRTAPPIK 611


>gi|90419528|ref|ZP_01227438.1| aspartyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336465|gb|EAS50206.1| aspartyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 595

 Score =  671 bits (1731), Expect = 0.0,   Method: Composition-based stats.
 Identities = 389/596 (65%), Positives = 482/596 (80%), Gaps = 2/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+HSC  L   DVG+ VRLSGW HR+R HGG++F+D+RDHYG+TQVV +PDS  F 
Sbjct: 1   MHRYRSHSCAALRKEDVGNTVRLSGWAHRIRDHGGLLFIDLRDHYGLTQVVVDPDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA++VR EWV+ +DG V +RSAET+N  + TG IE+ A++IE+LS A+ELPLPVFGE +Y
Sbjct: 61  IAETVRGEWVIRVDGEVKARSAETVNPKLPTGAIEVFAKEIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKN+++RT+I++ MR  M    F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNMMRRTQIVSKMRTLMGDAGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DR  GEFYQLD+E
Sbjct: 181 LVPSRLHNGMFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDEDPRADRFYGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DIL+TME V+R VFE F++G  VS +F RI Y +++R+YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDILSTMEPVIRDVFEAFADGKPVSQSFRRIPYAESMRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ +P  EVWAIPAK GG +RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 AVTEHFAGSGFKVFANMIAGDPAVEVWAIPAKTGG-SRAFCDRMNSWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +E+G V+G GP+AK++    TEA+R +L ++ GD+CFF+AG P  F +FA  AR  +
Sbjct: 360 WR-EEAGAVSGAGPLAKNIGEERTEAVRTQLGLEAGDACFFVAGRPEAFTAFAGAARTRV 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW EEEKKIDFAHNPF+MPQGGME+L+G + L +KAF
Sbjct: 419 GEELNLVDRDRFELAWIIDFPFYEWQEEEKKIDFAHNPFSMPQGGMEALEGEEPLKLKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASGGIRNH+ E M++AF   G SKE VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDIVCNGFEIASGGIRNHLPETMVKAFEIAGYSKETVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AG+DRIVMLL GAKN+RE+++FPM+Q   DLLMG+P+  S  QLR+LGLRI    K
Sbjct: 539 AGVDRIVMLLCGAKNLREIAMFPMNQQAHDLLMGAPNEASPAQLRDLGLRIAPQTK 594


>gi|91977416|ref|YP_570075.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|123721770|sp|Q135R5|SYD_RHOPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91683872|gb|ABE40174.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 590

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 363/591 (61%), Positives = 455/591 (76%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  SD+   VRLSGW HR+R HGG++F+D+RDHYG+TQ VA+PDS  F+
Sbjct: 1   MHRYRTHTCGALRDSDIDQTVRLSGWCHRIRDHGGLLFIDLRDHYGLTQCVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R+EWV+ IDG V  R   T N ++ TG+IEL   +IE+L  A ELPLPVFGE+EY
Sbjct: 61  DAEKLRAEWVVRIDGRVRRRPEGTDNDDLPTGKIELFITEIEVLGPAGELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ LH+NI+ R  I+++MR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDVRLRYRFLDLRREKLHQNIMTRGAIVDAMRARMKQQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV QDD+   ME V+ GVFE+F+ G  V+  + RI Y D++R+YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQDDVFAAMEPVITGVFEDFAKGKRVTKGWPRIPYADSMRKYGTDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L      +VWAIP  GGG +RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLE-EERNQVWAIPGPGGG-SRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G     GP+A ++    TEAIR  L ++ GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WREGGEG----AGPLANNIGPERTEAIRAALGLKAGDAAFFVAGDPSKFVKFAGLARTKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F   W++DFP YE+NE++KK+DF+HNPF+MPQGGM++L G D L+IKAF
Sbjct: 415 GEELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMDALLGQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNGFEIASGGIRNH  E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGFEIASGGIRNHRPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS V+ +QLREL +R+
Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSQVTPKQLRELHIRL 585


>gi|295689568|ref|YP_003593261.1| aspartyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295431471|gb|ADG10643.1| aspartyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 612

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 341/614 (55%), Positives = 438/614 (71%), Gaps = 24/614 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  SD G+ VRLSGW+HR R HGG++F+D+RDHYG+TQ+V +P++  F 
Sbjct: 4   MHAYRTHNCGALRASDTGAAVRLSGWIHRKRDHGGLVFIDLRDHYGLTQLVLHPETPGFS 63

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + +R+E V+ +DG V++R A  +N N+ TG+IE+    +E+LS A ELPLPVFGE +Y
Sbjct: 64  IVERLRAESVIRVDGEVIARDASVVNPNLPTGEIEIRVSAVEVLSEAAELPLPVFGEPDY 123

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR K+R+LDLRR+TLHKNIV R+R+I S+R  M A+ F E  TPILTASSPEGARDF
Sbjct: 124 PEEIRLKHRYLDLRRETLHKNIVLRSRVIQSIRNHMFAQGFNEFQTPILTASSPEGARDF 183

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++   FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 184 LVPSRLHPEKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADRSL-EFYQLDVE 242

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSN------------------GNTVSNNFLRICYDDA 282
           MSFV Q+D+   +E V+ GVFEEF N                         F R+ Y  +
Sbjct: 243 MSFVTQEDVFAAIEPVMHGVFEEFGNGRRVSPISETHTFVNDFGATFEHKGFERLTYAQS 302

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +  YG+DKPDLRNPI M NV+EHF    F +F+KIL  +   +VWAIPA  GG +RAFCD
Sbjct: 303 MAWYGSDKPDLRNPIKMANVSEHFRDGGFGLFAKILGADAKNQVWAIPAPTGG-SRAFCD 361

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
           RMN WA+ +GQPGL Y+FW  D+ G     GP+AK+L    T+A+   L +  GD+ FF+
Sbjct: 362 RMNSWAQGEGQPGLGYVFWSEDQGG---WGGPIAKNLG-EPTQALMESLGLGAGDAAFFV 417

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           AGDP  F  FA  AR  +  EL +++ N F+FCWI+DFP +EWNE+EKK+DF+HNPF+MP
Sbjct: 418 AGDPAVFAKFAGLARTRVGTELKLVDENQFKFCWIVDFPMFEWNEDEKKVDFSHNPFSMP 477

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           QGG+E+L+  D L+I+A+QYD+VCNG+E+ SG IRNH  E+ML+AF   G   EVVE +F
Sbjct: 478 QGGLEALETQDPLTIRAYQYDIVCNGYELCSGAIRNHKPEIMLKAFEIAGYGPEVVEEQF 537

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           GG+  AF+ G PPHGG+A GIDRIVMLL     +REV  FP++Q   DLLM +P+ V  +
Sbjct: 538 GGMLNAFRYGAPPHGGLAPGIDRIVMLLADQVAIREVIAFPLNQQGQDLLMNAPANVLDK 597

Query: 583 QLRELGLRIVENPK 596
           QL+EL +R     K
Sbjct: 598 QLKELHIRTAPPIK 611


>gi|298291120|ref|YP_003693059.1| aspartyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296927631|gb|ADH88440.1| aspartyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 590

 Score =  669 bits (1727), Expect = 0.0,   Method: Composition-based stats.
 Identities = 362/596 (60%), Positives = 457/596 (76%), Gaps = 6/596 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  SDVG+  RLSGW HR+R HGG++F+D+RDHYG+ QVV +PDS  F+
Sbjct: 1   MHRYRSHTCGALRASDVGTTARLSGWCHRIRDHGGVLFIDLRDHYGLMQVVVDPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR+EWV+ +DG V  R A T N  + TGQ+E+ A +IE+L  A ELPLPVFG+ EY
Sbjct: 61  LAETVRAEWVIRVDGRVRLRPAGTENPELPTGQVEVYATEIEVLGAAAELPLPVFGDVEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YRFLDLRR+ LHKNI+ R  II++MR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEETRLRYRFLDLRREKLHKNIMTRGAIIDAMRRRMKGQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E V+ GVFEEF++G  V+ N+ RI Y  ++++YGTDKPDLRNPI M 
Sbjct: 241 MSFVEQEDVFAAVEPVITGVFEEFADGKPVTKNWPRIPYAVSMQKYGTDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L       VWAIP   GG +RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARLLEAE-QNRVWAIPGPTGG-SRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G     GP+A ++    T AIR +L +++GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WREGGEG----AGPIANNIGPERTAAIRDQLGLKEGDAAFFVAGDPAKFVKFAGAARTKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE  WI+DFPFYEW+E+EKKIDF+HNPF+MPQGG+++L G D L+IKAF
Sbjct: 415 GEELNLVDHDRFELAWIVDFPFYEWSEDEKKIDFSHNPFSMPQGGLDALNGQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  ++ V  RFGGLYRAFQ G PPHGG+A
Sbjct: 475 QYDIACNGYEIASGGIRNHRPEAMVKAFELAGYDEQEVVERFGGLYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AG+DRIVMLL G  N+RE+S+FPM+Q   DLLMG+P+  S +QLREL +R     K
Sbjct: 535 AGVDRIVMLLCGTTNLREISIFPMNQQALDLLMGAPNEASPKQLRELHIRTNIQEK 590


>gi|115525278|ref|YP_782189.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|122295642|sp|Q07LH5|SYD_RHOP5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|115519225|gb|ABJ07209.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 590

 Score =  669 bits (1726), Expect = 0.0,   Method: Composition-based stats.
 Identities = 360/596 (60%), Positives = 457/596 (76%), Gaps = 6/596 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  S +   VR+SGW HR+R HGG++F+D+RDHYG+TQ VA+PDS  F+
Sbjct: 1   MHRYRSHTCGALRESHIDQTVRVSGWCHRIRDHGGLLFIDLRDHYGLTQCVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R+EWV+ IDG V  R   T NA++ TGQ+E+   +IE+L  A ELPLPVFGE+EY
Sbjct: 61  DAEKLRAEWVVKIDGKVRRRPEGTDNADLPTGQVEIFITEIEVLGPAGELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+ LH+NI+ R  I++SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRREKLHQNIMTRGAIVDSMRKRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGRFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+ Q+D+   ME V+ GVFEEF+ G  V++ + RI + +A+++YG+DKPDLRNPI M 
Sbjct: 241 MSFITQEDVFAAMEPVITGVFEEFAKGKRVNSVWPRIPFAEAMQKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L   P  +VWAIP KGGG +RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLE-EPRNQVWAIPGKGGG-SRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G     GP+A ++    TEAIR+ L +  GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WREGNEG----AGPLANNIGPERTEAIRIALGLGAGDAAFFVAGDPAKFVRFAGLARTRV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++   F   W++DFP YE+NE++KK+DF+HNPF+MPQGGME+L   D L+IKAF
Sbjct: 415 GEELNLVDKEQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMEALVTQDPLNIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNGFEIASGGIRNH  E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGFEIASGGIRNHRPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS V+ +QLREL +R+    +
Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSEVTPKQLRELHIRLNLQEE 590


>gi|302383320|ref|YP_003819143.1| aspartyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193948|gb|ADL01520.1| aspartyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 593

 Score =  667 bits (1722), Expect = 0.0,   Method: Composition-based stats.
 Identities = 342/597 (57%), Positives = 438/597 (73%), Gaps = 6/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CG L  SD GS VRLSGWVHR R HGG++F+D+RDHYG+TQ+V +P++  FE
Sbjct: 1   MHAYRSHTCGALRSSDAGSNVRLSGWVHRKRDHGGLLFIDLRDHYGLTQLVFHPETPGFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R+E V+ +DG V+ R A  +NAN+ TG++EL    +E+LS A ELPLPVFGE EY
Sbjct: 61  AVERLRAESVIRVDGEVVVRDASVVNANLPTGEVELRVTGVEVLSEAAELPLPVFGEPEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R K+R+LDLRR+TLHKNIV R+R+I+S+R RM+ + F+E  TPILTASSPEGARDF
Sbjct: 121 PEELRLKHRYLDLRRETLHKNIVLRSRVISSIRQRMVGQGFLEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADRSL-EFYQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN-TVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+   +E V+ GVFEEF++G       F RI Y D+I  YGTDKPD RNPI M
Sbjct: 240 MSFVTQEDVFAAIEPVMHGVFEEFADGKSVTPYPFPRIPYRDSIAWYGTDKPDTRNPIKM 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V++ F    F +F+KIL  +    VWAIPA GGG +RAFCDRMN WA+ +GQPGL YI
Sbjct: 300 ADVSDRFRDGGFGLFAKILGADAKNAVWAIPAPGGG-SRAFCDRMNSWAQGEGQPGLGYI 358

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FW  D   N A  GP+AK+L    T+A+  +L +  GD+ FF+AGDP  F  FA  AR  
Sbjct: 359 FWSDD---NDAWGGPIAKNLGGEATDALMNQLGLGKGDAAFFVAGDPKVFYKFAGSARTR 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  EL +I+   FEFCWI+DFP +EW++EEKK+DF+HNPF+MPQG +E+L   D L I A
Sbjct: 416 LGTELKLIDEGRFEFCWIVDFPMFEWSDEEKKVDFSHNPFSMPQGELEALTTKDPLDILA 475

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG+E+ SG IRNH +E+ML+AF   G    VVE++FGG+  AF+ G PPHGG+
Sbjct: 476 YQYDIVCNGYELCSGAIRNHKAEIMLKAFEIAGYDASVVEDQFGGMLNAFRYGAPPHGGL 535

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A GIDRIVMLL     +REV  FP++Q   DLLM +P+     QL+++ +R     K
Sbjct: 536 APGIDRIVMLLANQVAIREVIAFPLNQQGEDLLMNAPTEAGERQLKDVHIRTAMPLK 592


>gi|114704848|ref|ZP_01437756.1| aspartyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114539633|gb|EAU42753.1| aspartyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 595

 Score =  667 bits (1720), Expect = 0.0,   Method: Composition-based stats.
 Identities = 381/597 (63%), Positives = 475/597 (79%), Gaps = 2/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+HSC DL  + VG  VRLSGW HR+R HGG++F+D+RDHYG+TQVV +PDS  F 
Sbjct: 1   MHRYRSHSCADLRSAHVGDTVRLSGWAHRIRDHGGLLFIDLRDHYGLTQVVVDPDSPAFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VR EWV+ IDG V +RSAET+N  + TG IE+ A++IE+LS A+ELPLPVFGE EY
Sbjct: 61  TAEAVRGEWVIRIDGEVKARSAETVNPKLPTGDIEIFAREIEVLSPAKELPLPVFGEPEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+TLHKNI++RT+II+ +R  M    F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRETLHKNIMRRTKIISKIRELMQGAAFTEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DR  GEFYQLD+E
Sbjct: 181 LVPSRLHNGMFYALPQAPQQYKQLLMISGFDRYFQIAPCFRDEDPRADRFYGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI  TME V+R VF+ F++G  V++ F RI Y +++R+YGTDKPDLRNPI M 
Sbjct: 241 MSFVEQEDIFQTMEPVIRDVFKTFADGKPVTDTFRRIPYAESMRKYGTDKPDLRNPIEMS 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VTEHF  S F+VF+ +++ +   EVWAIPAK GG +RAFCDRMN WA+ +GQPGL YIF
Sbjct: 301 AVTEHFAGSGFKVFANMIANDEKVEVWAIPAKTGG-SRAFCDRMNSWAQGEGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR +    ++G GP+AK++    TEA+R +L ++ GD+CFF+AG P KF +FA  AR  +
Sbjct: 360 WRAEGD-EISGAGPLAKNIGPERTEAVRTQLGLESGDACFFVAGRPEKFMAFAGSARTRV 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + +E  WI+DFPFYE++E+EKKIDFAHNPF+MPQGGM++L+  + LSIKAF
Sbjct: 419 GEELNLVDRDRYELAWIVDFPFYEYDEDEKKIDFAHNPFSMPQGGMDALQNEEPLSIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNGFEIASGGIRN + E M++AF   G  +  VE RFGGLYRAFQ G PPHGG+A
Sbjct: 479 QYDVVCNGFEIASGGIRNSVPETMVKAFELAGYDQATVEERFGGLYRAFQYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           AGIDRIVMLL GA+N+RE++LFPM+Q   DLLMG+P+  S  QLRELGLR+    K+
Sbjct: 539 AGIDRIVMLLCGARNLREIALFPMNQQAFDLLMGAPAEASPAQLRELGLRMAPKAKE 595


>gi|86749616|ref|YP_486112.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|123292659|sp|Q2IX59|SYD_RHOP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|86572644|gb|ABD07201.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 590

 Score =  667 bits (1720), Expect = 0.0,   Method: Composition-based stats.
 Identities = 356/591 (60%), Positives = 456/591 (77%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  SD+   VR+SGW HR+R HGG++F+D+RDHYG+TQ VA+PDS  F+
Sbjct: 1   MHRYRTHTCGALRDSDIDQTVRVSGWCHRIRDHGGLLFIDLRDHYGLTQCVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R+EWV+ IDG V  R   T N ++ TG++E+   +IE+L  A ELPLPVFGE++Y
Sbjct: 61  DAEKLRAEWVVRIDGRVRRRPEGTDNDDLPTGKVEIFITEIEVLGPAGELPLPVFGEQDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ LH+NI+ R  I+++MR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDVRLRYRFLDLRREKLHQNIMTRGAIVDAMRKRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV QDD+   ME V+ GVFE+F+ G  V+ ++ RI Y +++R+YGTDKPDLRNP+ M 
Sbjct: 241 MSFVTQDDVFAAMEPVITGVFEDFAKGKPVTKSWPRIPYFESLRKYGTDKPDLRNPLEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L      +VWAIP  GGG +RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLE-EERNQVWAIPGPGGG-SRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G     GP+A ++    TEAIRV L ++ GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WREGNEG----AGPLANNIGPERTEAIRVALGLKAGDAAFFVAGDPAKFVKFAGLARTKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F   W++DFP YE+NE++KK+DF+HNPF+MPQGGM++L   D L+IKAF
Sbjct: 415 GEELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMDALTSQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGEQEVIDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS V+ +QLREL +R+
Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSQVAPKQLRELHIRL 585


>gi|75675780|ref|YP_318201.1| aspartyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|97196752|sp|Q3SS92|SYD_NITWN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|74420650|gb|ABA04849.1| aspartyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 590

 Score =  667 bits (1720), Expect = 0.0,   Method: Composition-based stats.
 Identities = 363/591 (61%), Positives = 456/591 (77%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  S +   VRLSGW HR+R HGG++F+D+RDHYG+TQ VA+PDS  F 
Sbjct: 1   MHRYRSHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVADPDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSEWV+ IDG    R A T N  + TG +E+   +IE+L  A ELPLPVFGE+EY
Sbjct: 61  LAEKLRSEWVVRIDGKARRRPAGTENPELPTGDVEIYVTEIEVLGPAAELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+ LH+NI+ R  I++SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRENLHQNIMTRGAIVDSMRKRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD+   +E V+ GVFEEF+ G  V+ N+ RI + +++R+YGTDKPDLRNP++M 
Sbjct: 241 MSFVEQDDVFAAVEPVITGVFEEFAKGKPVTRNWPRIPFAESLRKYGTDKPDLRNPLLMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L  +   +VWAIP  GGG +RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLE-DSKNQVWAIPGPGGG-SRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G     GP+A ++    TEAIRV+L ++ GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WREGGEG----AGPLANNIGPERTEAIRVQLGLKAGDAAFFVAGDPAKFWKFAGLARTRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + FE  WI+DFP YE+NEE+KK+DF+HNPF+MPQGG+++L   D L+IKAF
Sbjct: 415 GEELNLIDKDRFELAWIVDFPMYEYNEEDKKVDFSHNPFSMPQGGLDALNTQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  +  V  RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGENDVVERFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS V+ +QLREL +R+
Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSEVAPKQLRELHIRL 585


>gi|310814751|ref|YP_003962715.1| aspartyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308753486|gb|ADO41415.1| aspartyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 593

 Score =  667 bits (1720), Expect = 0.0,   Method: Composition-based stats.
 Identities = 327/595 (54%), Positives = 424/595 (71%), Gaps = 3/595 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C  L  ++VG  VRLSGWVHRVR HGGI+F+D+RDHYGITQV+ +PDS  F 
Sbjct: 1   MHAYRSHTCAALNAANVGQNVRLSGWVHRVRDHGGILFIDLRDHYGITQVLVDPDSPAFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR+EW + IDGLV +R A  +N  + TG+IE+  Q IE+L  A ELPL VFGE+EY
Sbjct: 61  AVEKVRAEWCIRIDGLVKARDASLVNPKLATGEIEVFVQDIEVLGAAAELPLQVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + + +  R+ ++ S+R RM  + F E  TPI+T+SSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREDMQRKMTLRSDVVASIRQRMWGKGFREYQTPIITSSSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           L+PSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LIPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T++ VL G+FEEF  G  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQKDVFDTIQPVLSGLFEEFGGGRKVDTEWPQISYKDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F VF+K+L  +   ++ AIPA  GG +R FCDRMN WA+ +G PG+ YIF
Sbjct: 301 VVSEHFAGSGFAVFAKLLEQDGT-QIRAIPAPTGG-SRKFCDRMNVWAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  ++G +   GP+AK++    TEAIR++L +  GD+ FF+ G P  F   A  ARN I
Sbjct: 359 WRTGDNGEMEAAGPLAKNIGPERTEAIRLQLGLGLGDAAFFLGGKPAVFEKIAGKARNEI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             ELG+   + F F WI+DFP Y+ + E    +F HNPF+MPQGG+E+L G D L+++ +
Sbjct: 419 GNELGLTEKDRFAFAWIVDFPLYQQDAETGAYEFEHNPFSMPQGGLEALNG-DPLAVRGY 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G   + V  RFGG+  AF  G PPHGG A
Sbjct: 478 QYDLACNGYELVSGAIRNHQPEIMFKAFEIAGYGPDEVRRRFGGMVNAFTYGAPPHGGCA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           AGIDRIVMLL   +N+REV LFPM+Q   D++MG+P+  + EQLREL LR++   
Sbjct: 538 AGIDRIVMLLADEQNIREVILFPMNQRAEDVMMGAPNEPTNEQLRELRLRVLPPE 592


>gi|146340332|ref|YP_001205380.1| aspartyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|166225323|sp|A4YTC4|SYD_BRASO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146193138|emb|CAL77150.1| Aspartyl-tRNA synthetase / asparaginyl-tRNA synthetase
           (Aspartate-/asparagine-tRNA ligase) (AspRS)
           [Bradyrhizobium sp. ORS278]
          Length = 590

 Score =  667 bits (1720), Expect = 0.0,   Method: Composition-based stats.
 Identities = 362/590 (61%), Positives = 454/590 (76%), Gaps = 6/590 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  S++G  VRLSGW HR+R HGG++F+D+RDHYGITQ V +PDS  F 
Sbjct: 1   MHRYRTHTCGALRDSNIGETVRLSGWCHRIRDHGGVLFVDLRDHYGITQCVVDPDSKAFG 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSEWV+ ++G V  R   T N  + TGQ+EL    IE+L  A ELPLPVFGE++Y
Sbjct: 61  LAEKLRSEWVVRMEGKVRHRPEGTENPELPTGQVELYVADIEVLGPAAELPLPVFGEQDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRRD LH+NI+ R  II+SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRRDRLHQNIMTRGAIIDSMRRRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   ME V+ GVFE+F+ G  V+  + RI + +A+R+YGTDKPDLRNP+ M 
Sbjct: 241 MSFVEQEDVFAAMEPVITGVFEDFAKGKPVTKGWPRIPFAEALRKYGTDKPDLRNPLEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L  +P  +VWAIPA GGG +RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLE-DPKNQVWAIPAPGGG-SRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G     GP+A ++    T AIR +L  ++GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WREGGEG----AGPLANNIGPERTAAIRSQLGTKEGDAAFFVAGDPDKFWKFAGLARTKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F   WI+DFP YE+NE++KK+DF+HNPF+MPQGG+E+L   D L+IKAF
Sbjct: 415 GEELNLIDKDRFALAWIVDFPMYEYNEDDKKVDFSHNPFSMPQGGLEALTTKDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDIACNGYEIASGGIRNHKPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS  + +QLREL ++
Sbjct: 535 AGVDRIVMLLCGTTNLREISLFPMNQQAMDLLMGAPSEATTKQLRELHIK 584


>gi|205374220|ref|ZP_03227019.1| aspartyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 591

 Score =  666 bits (1719), Expect = 0.0,   Method: Composition-based stats.
 Identities = 236/595 (39%), Positives = 358/595 (60%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           R+H CG++    VG  V L GWV + R  GG+IF+D+RD  GI Q V NP+++    +IA
Sbjct: 4   RSHYCGEVTEVQVGEKVVLKGWVQKRRDLGGLIFIDLRDRSGIVQTVFNPETSMEALQIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  R+E++L + G V+ R  + IN +I TG+IE+S +++ I++ A+  P  +    +  E
Sbjct: 64  EKARNEYILQVSGSVLKRDEKAINPSIPTGKIEISVEEVTIINEAKNPPFMIENNTDVSE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + +    R ++  S+R  +  + F +  TP+LT S+PEGARD+LV
Sbjct: 124 DLRLKYRYLDLRRPEMIETFKMRHQVTTSIRNYLNDQGFYDVETPMLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+DMEMS
Sbjct: 184 PSRVHEGHFYALPQSPQIFKQLLMVSGFDRYYQIVRCFRDEDLRADRQP-EFTQIDMEMS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++I+  ME++++ + +E    +  +  F R+ YD+A+ RYG+DKPD R  + + +V
Sbjct: 243 FMSQEEIVALMEDMMKQLMKEVKGVDLPAE-FPRMTYDEAMSRYGSDKPDTRFAMELIDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            E    S+F+VFS  ++     ++  +       +R   D + E+    G  GLA++   
Sbjct: 302 AEIVKDSDFKVFSGTIASGGHVKLLNVKGAAERYSRKDIDALTEFVSVYGAKGLAWVKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E       GP+AK L+    + I+     + GD   F+A  P          R  +A+
Sbjct: 362 ESE-----VKGPIAKFLSEEVQQGIKATAGAEVGDLLLFVADKPSVVADSLGALRLKLAK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP         +D  +++A  Y
Sbjct: 417 ELGLIDSSKFNFLWVTDWPLFEYDEEEGRYYAAHHPFTMPAAADVDKLTSDPRNVRAEAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  ++  + F  +G SKE  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYQRDIQEKMFEVLGFSKEEAKEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +P+TVS EQL EL L +     K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPNTVSDEQLNELHLSLCVKESK 591


>gi|148552972|ref|YP_001260554.1| aspartyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|148498162|gb|ABQ66416.1| aspartyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 593

 Score =  666 bits (1719), Expect = 0.0,   Method: Composition-based stats.
 Identities = 330/598 (55%), Positives = 420/598 (70%), Gaps = 7/598 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L   DVGS VRLSGWVHR R HG ++F+D+RDHYG+TQ+V + +S  F 
Sbjct: 2   MHAYRTHNCGQLRAQDVGSQVRLSGWVHRKRDHGNLLFVDLRDHYGLTQIVTDIESEAFR 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R E V+ I G V++R+ E +N N+ TG+IE+ A+++ + S A+ELPLPV GE +Y
Sbjct: 62  QLERLRVESVVTITGDVVARAGEAVNPNLATGEIEIRAREVSVQSTAQELPLPVAGEADY 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YRFLDLRRD +H NIV R+ +I S+R RMI + F E  TPILTASSPEGARDF
Sbjct: 122 PEDIRLRYRFLDLRRDRIHANIVLRSNVIASIRRRMIDQGFTEYQTPILTASSPEGARDF 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQ +KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 182 LVPSRIHPGKFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN-TVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+   +E VL GVFEEF+NG       F RI Y DA+ RYG+DKPDLRNP+ +
Sbjct: 242 MSFVTQEDVFAAIEPVLHGVFEEFANGRAVTPAPFPRIAYRDAMLRYGSDKPDLRNPLEI 301

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTEHF  S F +F++I+           P  G   +R F D MN+WAR+QG  GL YI
Sbjct: 302 TDVTEHFQGSGFGLFARIVEGGGVVRAIPAPGAGAK-SRKFFDDMNDWARAQGHAGLGYI 360

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +  E+G     GP+AK+     T  +   L +   D  FF AG  L     A  AR  
Sbjct: 361 NIKGGEAG-----GPIAKNHGEEATAKLIAALGLGPDDGVFFAAGKELATAKLAGAARTR 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +ELG+I    F+FCW++DFP +E++E+ KKIDF+HNPF+MPQG ME+L+  D L I A
Sbjct: 416 VGEELGLIEQGVFKFCWVVDFPMFEYDEDAKKIDFSHNPFSMPQGEMEALETMDPLDILA 475

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+M +AF   G S+E VE  F G+  AF+ G PPHGG 
Sbjct: 476 YQYDIVCNGVELSSGAIRNHRPEIMYKAFEIAGYSQEQVEENFSGMLNAFKFGAPPHGGS 535

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A GIDRIVMLL    N+REV LFPM+Q   DL+MG+PS VS++QLREL +R+VE  K+
Sbjct: 536 APGIDRIVMLLADEPNIREVVLFPMNQKAEDLMMGAPSQVSLKQLRELNIRVVEQSKQ 593


>gi|92117639|ref|YP_577368.1| aspartyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|123083659|sp|Q1QLI9|SYD_NITHX RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91800533|gb|ABE62908.1| aspartyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 590

 Score =  666 bits (1717), Expect = 0.0,   Method: Composition-based stats.
 Identities = 362/591 (61%), Positives = 456/591 (77%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  S +   VRLSGW HR+R HGG++F+D+RDHYG+TQ VA+PDS  F 
Sbjct: 1   MHRYRSHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVADPDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSEWV+ IDG    R A T N  + TGQIE+   +IE+L  A+ELPLPVFGE+EY
Sbjct: 61  QAEKLRSEWVVRIDGKARLRPAGTENPELPTGQIEIYINEIEVLGPADELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+ LH+NI+ R  I++SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRREKLHQNIMTRGAIVDSMRKRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD+   +E V+ GVFEEF+ G  V+ N+ RI + +++R+YGTDKPDLRNP++M 
Sbjct: 241 MSFVEQDDVFAAVEPVVTGVFEEFAKGKPVTKNWPRIPFAESLRKYGTDKPDLRNPLLMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++HF  S F+VF+++L  +   +VWAIP  GGG +RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSQHFRGSGFKVFARMLE-DSKNQVWAIPGPGGG-SRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G     GP+A ++    TEAIR +L ++ GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WREGGEG----AGPLANNIGPERTEAIRQQLGLKAGDAAFFVAGDPAKFWKFAGLARTKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + FE  WI+DFP YE+NE+EKK+DF+HNPF+MPQGG+++L   D L+IKAF
Sbjct: 415 GEELNVIDKDRFELAWIVDFPMYEYNEDEKKVDFSHNPFSMPQGGLDALNNQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  +  V  RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGYEIASGGIRNHRPEAMVKAFEIAGYGENDVVERFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DR+VMLL G  N+RE+SLFPM+Q   DLLMG+PS V+ +QLREL +R+
Sbjct: 535 AGVDRVVMLLCGTTNLREISLFPMNQRAEDLLMGAPSDVTPKQLRELHIRL 585


>gi|27379254|ref|NP_770783.1| aspartyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|46577252|sp|Q89MP9|SYD_BRAJA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|27352405|dbj|BAC49408.1| aspartyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 590

 Score =  666 bits (1717), Expect = 0.0,   Method: Composition-based stats.
 Identities = 363/596 (60%), Positives = 462/596 (77%), Gaps = 6/596 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  S++G  +RLSGWVHRVR HGG++F+D+RDHYG+TQ V +PDS  F 
Sbjct: 1   MHRYRSHTCGALRESNIGETIRLSGWVHRVRDHGGVLFIDLRDHYGLTQCVVDPDSPAFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSE+V+ +DG V  R   T N ++ TG+IE+   +IE+L  A +LPLPVFG++EY
Sbjct: 61  LAEKLRSEFVIKMDGKVRRRPEGTDNDDLPTGKIEIYVSEIEVLGPAGDLPLPVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+ LH+NI+ R  II SMR RM  + F E +TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRREKLHQNIMTRVEIIKSMRRRMEGQGFFEFNTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   ME V+ GVFEEF+ G  VS N+ RI + +A+R+YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQEDVFAAMEPVITGVFEEFAKGKPVSKNWRRIPFAEALRKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F+VF+++L  +P  +VWAIPA GGG +RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 EVSEHFRGSGFKVFARMLE-DPKNQVWAIPAPGGG-SRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G     GP+A ++    T AIR ++ +++GD+ FF+AGDP KF  F+  ARN +
Sbjct: 359 WREGGEG----AGPLANNIGPERTAAIRAQIGVKEGDAAFFVAGDPDKFWKFSGLARNKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL + +   FE  WI+DFP YE+NE++KK+DF+HNPF+MPQGG+E+LKG D L+IKAF
Sbjct: 415 GEELNLTDKERFELAWIVDFPMYEYNEDDKKVDFSHNPFSMPQGGLEALKGQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH+ E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGYEIASGGIRNHVPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS  + +QLREL +R+    K
Sbjct: 535 AGVDRIVMLLCGTTNLREISLFPMNQQAMDLLMGAPSEATTKQLRELHVRVNLPQK 590


>gi|148255261|ref|YP_001239846.1| aspartyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|166225322|sp|A5EIE6|SYD_BRASB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146407434|gb|ABQ35940.1| aspartyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 590

 Score =  665 bits (1715), Expect = 0.0,   Method: Composition-based stats.
 Identities = 365/596 (61%), Positives = 455/596 (76%), Gaps = 6/596 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  S++G  VRLSGW HR+R HGG++F+D+RDHYGITQ V +PDS  F 
Sbjct: 1   MHRYRTHTCGALRDSNIGETVRLSGWCHRIRDHGGVLFVDLRDHYGITQCVVDPDSKAFG 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSEWV+ ++G V  R   T NA + TGQ+EL    IE+L  A ELPLPVFGE+EY
Sbjct: 61  LAEKLRSEWVVRMEGKVRRRPEGTDNAELPTGQVELYVADIEVLGPAAELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+ LH+NI+ R  II+SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRREKLHQNIMTRGAIIDSMRRRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   ME V+ GVFE+F+ G  V+  + RI + +A+R+YGTDKPDLRNPI M 
Sbjct: 241 MSFVEQEDVFAAMEPVITGVFEDFAKGKPVTKGWPRIPFAEALRKYGTDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L      +VWAIPA GGG +RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLEDTKN-QVWAIPAPGGG-SRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G     GP+A ++    T AIR +L  ++GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WREGGEG----AGPLANNIGPERTAAIRTQLGTKEGDAAFFVAGDPEKFWKFAGLARTKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F   WI+DFP YE+NE++KK+DF+HNPF+MPQGG+E+L+  D L+IKAF
Sbjct: 415 GEELNLIDKDRFALAWIVDFPMYEYNEDDKKVDFSHNPFSMPQGGLEALQTKDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDIACNGYEIASGGIRNHKPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS  + +QLREL +R     K
Sbjct: 535 AGVDRIVMLLCGTTNLREISLFPMNQQAMDLLMGAPSEATTKQLRELHIRTNLPNK 590


>gi|329850487|ref|ZP_08265332.1| aspartyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328840802|gb|EGF90373.1| aspartyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 598

 Score =  665 bits (1715), Expect = 0.0,   Method: Composition-based stats.
 Identities = 336/599 (56%), Positives = 437/599 (72%), Gaps = 6/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CG L +SD GS  RLSGWVHR R  GG++F+D+RDHYGITQ+V NP S  F 
Sbjct: 1   MHIYRSHTCGALRLSDAGSQARLSGWVHRKRDFGGLLFIDLRDHYGITQLVFNPSSPGFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R+E V+ +DG V++R  ET N N+ TG++E+    +E+LS + ELPLPVFGE +Y
Sbjct: 61  KVERLRAESVIRVDGNVVARDPETFNPNLDTGEVEVRVTDVEVLSESAELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R K RFLDLRR+TLHKNIV R+++I S+R RM+ + F+E  TPILTASSPEGARDF
Sbjct: 121 PEEVRLKNRFLDLRRETLHKNIVLRSKVIQSIRNRMVGQGFLEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADRSL-EFYQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT-VSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+   +E V+ G+F EF +G    S  F RI Y ++I +YG+DKPDLRNPI M
Sbjct: 240 MSFVTQEDVFAAIEPVIHGLFTEFGDGKRVSSYPFQRIPYKESIAKYGSDKPDLRNPIEM 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V+ HF  S F+VF+ IL  +     WAIPAK GG +RAFCD+MN WA+ +GQ GL YI
Sbjct: 300 QDVSVHFAGSGFKVFASILEQDGTAV-WAIPAKTGG-SRAFCDKMNSWAQGEGQKGLGYI 357

Query: 360 FWRLDE--SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           FWR  E  +  +   GP+AK++    TEA+R +L + +GD+ FF+AG   +F  FA  AR
Sbjct: 358 FWRTPEGAAEGLEAAGPIAKNIGEERTEALRQQLGLDNGDAAFFVAGKVDEFVKFAGSAR 417

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+++ + F FCWI+DFP +EWN+EEKKIDF+HNPF+MPQG ME+L   D   I
Sbjct: 418 TKVGTDLGLVDEDQFRFCWIVDFPMFEWNDEEKKIDFSHNPFSMPQGEMEALLTKDPREI 477

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+QYD+VCNG+E+ SG IRNH  E+ML+AF   G   +VVE++FGG+  AF+ G PPHG
Sbjct: 478 LAYQYDIVCNGYELCSGAIRNHKQEIMLKAFEIAGYGHDVVESQFGGMLNAFKYGAPPHG 537

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+A GIDRIVMLL G   +REV  FP++Q   D++M +PS    +QL+EL +R     K
Sbjct: 538 GLAPGIDRIVMLLAGQTAIREVIAFPLNQQGQDVMMSAPSDALDKQLKELHIRTALPIK 596


>gi|149915882|ref|ZP_01904406.1| aspartyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149810205|gb|EDM70051.1| aspartyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 592

 Score =  664 bits (1713), Expect = 0.0,   Method: Composition-based stats.
 Identities = 333/594 (56%), Positives = 436/594 (73%), Gaps = 4/594 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  S+VG  VRLSGWVHR+R HGG++F+D+RDHYGITQV+ +PDS  F+
Sbjct: 1   MHAYRSHTCAELDTSNVGQTVRLSGWVHRIRDHGGVLFIDLRDHYGITQVLCDPDSPVFD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R A  INA I TG+IE+  + +E+L  A+ELPL VFG++EY
Sbjct: 61  QVERVRSEWCIRIDGDVKARDASLINAKIPTGEIEVFIRDMEVLGSAKELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R ++R+LDLRR+ + +N+  R+ ++ S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRHRYLDLRREEMQRNMTLRSDVVASIRRRMWDKGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQ +KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGRFYALPQAPQLFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ VL  VFEEF  G+ V  ++  I Y DA   YGTDKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVLESVFEEFGPGHKVDKHWPHISYRDAALWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F +F+K+L  +   ++ AIPA  GG +R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 DVSEHFRGSGFAIFAKLLEQDGT-QIRAIPAPTGG-SRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E+G +   GP+AK++    TEAIR++L +  GD+ FF+ G P  F S A  AR  I
Sbjct: 359 WRDGENG-MEAAGPLAKNIGPERTEAIRLQLGLGKGDAAFFLGGKPQSFESVAGRARTVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+ + + F FCW++DFP YE ++E  KIDF+HNPF+MPQGG+++L G D L +  F
Sbjct: 418 GEELGLTDKDRFAFCWVVDFPMYEKDDETGKIDFSHNPFSMPQGGLDALSG-DPLEVLGF 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  ++M++AF   G  +  V  RFGGL  AFQ G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHKLDIMIKAFELAGYDEAEVHKRFGGLVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           AGIDRIVMLL   +N+REV +FPM+Q   DL+M +PS  S EQL ELGLR++E 
Sbjct: 537 AGIDRIVMLLANEQNIREVIMFPMNQRAEDLMMNAPSEASSEQLMELGLRVIEQ 590


>gi|90423838|ref|YP_532208.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|123395033|sp|Q215P7|SYD_RHOPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|90105852|gb|ABD87889.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 590

 Score =  664 bits (1712), Expect = 0.0,   Method: Composition-based stats.
 Identities = 361/591 (61%), Positives = 455/591 (76%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  SD+   VR+SGW HR+R HGG++F+D+RDHYG+TQ VA+PDS  F+
Sbjct: 1   MHRYRSHTCGALRESDIDQTVRVSGWCHRIRDHGGLLFIDLRDHYGLTQCVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R+EWV+ IDG V  R   T N ++ TGQ+E+   +IE+L  A ELPLPVFGE+EY
Sbjct: 61  DAEKLRAEWVVRIDGKVRRRPEGTDNNDLPTGQVEIFITEIEVLGPAGELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+ LH+NI+ R  I++SMR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRREKLHQNIMTRGAIVDSMRKRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGRFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+ QDD+   ME V+ GVFE+F+ G  V+ ++ RI Y D++++YGTDKPDLRNPI M 
Sbjct: 241 MSFITQDDVFAAMEPVITGVFEDFAKGKPVTKSWPRIAYADSLKKYGTDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+EHF  S F+VF+++L      +VWAIP  GGG +RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 NVSEHFRGSGFKVFARMLE-EERNQVWAIPGPGGG-SRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G     GP+A ++    T AIR +L ++ GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WREGGEG----AGPLANNIGPERTAAIREQLGLKAGDAAFFVAGDPSKFVRFAGLARTRL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++   FE  WI+DFP YE+NE++KK+DF+HNPF+MPQGGM++L   D L+IKAF
Sbjct: 415 GEELNLVDKERFELAWIVDFPMYEYNEDDKKVDFSHNPFSMPQGGMDALLNQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNGFEIASGGIRNH  E M++AF   G  ++ V +RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDITCNGFEIASGGIRNHRPEAMVKAFEIAGYGEQEVVDRFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS V+ +QLREL +R+
Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSDVTPKQLRELHIRL 585


>gi|146276417|ref|YP_001166576.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|166225381|sp|A4WPF7|SYD_RHOS5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145554658|gb|ABP69271.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 591

 Score =  661 bits (1706), Expect = 0.0,   Method: Composition-based stats.
 Identities = 339/594 (57%), Positives = 433/594 (72%), Gaps = 4/594 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L    VG  VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+ DS  F 
Sbjct: 1   MHAYRSHTCAELNAGHVGQEVRLSGWVHRVRDHGGVLFIDLRDHYGITQVIADADSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             ++VR+EWV+ I+G V  R A  +N  + TG+IE+ A  + +L  A+ELP+PVFGE +Y
Sbjct: 61  ELETVRAEWVIRIEGRVKGRDAALVNPKLATGEIEVYATGLTVLGAADELPMPVFGEVDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R  YRFLDLRR+ LH N++ R+ ++ S+R RM    F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLTYRFLDLRREKLHANMMLRSNVVRSLRNRMWDAGFNEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   ++ V+RG+FEEF  G  V  ++ RI Y DA+  YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVFRAVQPVIRGIFEEFGGGRRVDADWPRIAYRDAMLWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L      E+ AIPA  GG +R FCDRMN +A+SQG PG+ YIF
Sbjct: 301 VVSEHFRGSGFAIFAKLLENEGT-EIRAIPAPTGG-SRKFCDRMNAFAQSQGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  + G +   GP+AK++    TEAIR +L + +GD+ FF+ G P  F + A  ARN I
Sbjct: 359 WRKGDDGAMEAAGPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPETFEAVAGRARNEI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+   NCF F WI+DFP YE + +E K+DF+HNPF+MPQGGM +L+G D L + A+
Sbjct: 419 GRELGLTEENCFRFAWIVDFPMYEKD-DEGKVDFSHNPFSMPQGGMAALEG-DPLKVLAY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SGGIRNH  E+M +AF   G     VE RFGG+ +AF+ G PPHGG A
Sbjct: 477 QYDLACNGYELISGGIRNHKPEIMFKAFELAGYPASEVEKRFGGMVKAFRYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           AGIDRIVMLL    N+REV +FPM+Q   DLLMG+PS  + EQLREL LR+V  
Sbjct: 537 AGIDRIVMLLADEANIREVIMFPMNQRAEDLLMGAPSEPTNEQLRELRLRVVPK 590


>gi|163742945|ref|ZP_02150329.1| aspartyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161383909|gb|EDQ08294.1| aspartyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 592

 Score =  661 bits (1706), Expect = 0.0,   Method: Composition-based stats.
 Identities = 331/596 (55%), Positives = 428/596 (71%), Gaps = 4/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  S+VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS  F 
Sbjct: 1   MHDYRSHTCAELNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R    +N  I TG+IE+  + IE+L  +EELPL VFGE+EY
Sbjct: 61  EIEKVRSEWCIRIDGNVKARDESLVNDKIPTGEIEVFIRDIEVLGKSEELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + KN++ R+ +I S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQKNMLLRSNMIQSIRRRMWDKGFNEYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T++ V++GVFEEF  G  V + + +I Y DA + YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQQDVFDTIQPVMQGVFEEFGKGRKVDSEWPQISYKDAAKWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           + +EHF  S F +F+ +L             KGG  +R FCDRMN++A+ +G PG+ YIF
Sbjct: 301 DCSEHFRGSGFAIFANLLENEGTEIRAIPAPKGG--SRKFCDRMNKFAQGEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F S A  AR  I
Sbjct: 359 WRDQGEG-MEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKTFESVAGRARTVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+ + + F FCWI+DFP YE +EE  KIDF HNPF+MPQGGM++L  +D L++K +
Sbjct: 418 GEELGLTDKDRFAFCWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALL-SDPLAVKGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G  KE VE RFGG+  AFQ G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDR+VMLL    N+REV +FPM+Q   DL+M +PS    +QL ELGLR++   +
Sbjct: 537 AGIDRMVMLLADEANIREVIMFPMNQRAEDLMMAAPSEPMSDQLMELGLRVIPQDQ 592


>gi|158425283|ref|YP_001526575.1| aspartyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|172048012|sp|A8IFX1|SYD_AZOC5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|158332172|dbj|BAF89657.1| aspartyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 590

 Score =  661 bits (1705), Expect = 0.0,   Method: Composition-based stats.
 Identities = 363/596 (60%), Positives = 458/596 (76%), Gaps = 6/596 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  + VG  VR+SGW HR+R HGG++F+D+RDHYG+TQVV +PDSA F 
Sbjct: 1   MHRYRTHTCGALTEAQVGDTVRVSGWCHRIRDHGGVLFVDLRDHYGLTQVVFDPDSAAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ VR+EWV+ +DG V  R   T N+ + TG++E+ A  +E+L  A ELPLPVFG+++Y
Sbjct: 61  AAEKVRAEWVIRVDGRVRLRPEGTENSELATGKVEIYATDLEVLGPAAELPLPVFGDQDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YRFLDLRR+ +H NI+KR +II+S+R RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLRYRFLDLRRERIHGNIMKRGQIIDSLRQRMKGQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV QDD+   +E V+RGVFEEF  G  V+ N+ RI Y +A+R+YG+DKPDLRNP++M 
Sbjct: 241 MSFVTQDDVFAAVEPVIRGVFEEFGGGKPVTQNWPRIPYAEALRKYGSDKPDLRNPLVMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+EHF  S F+VF+++L  +P  EVWAIP   GG +RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 NVSEHFRGSNFKVFARLLE-DPKNEVWAIPGPTGG-SRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G     GP+A ++    T AIR +L ++DGD+ FF+AG+P KF  FA  AR  +
Sbjct: 359 WREGGEG----AGPLANNIGPERTAAIREQLGLKDGDAAFFVAGNPEKFYKFAGLARTKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+   FE  WI+DFPFYEW++EEKKIDF+HNPF+MPQGG+E+L G D L+IKAF
Sbjct: 415 GEELKLIDTERFELAWIVDFPFYEWSDEEKKIDFSHNPFSMPQGGLEALNGQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH  E M++AF   G  +  V  RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDIACNGYEIASGGIRNHRPEAMVKAFELAGYDEATVIERFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDRIVMLL G  N+RE+SLFPM+Q   DLLMG+P+  + +Q++EL +R     K
Sbjct: 535 AGIDRIVMLLCGVSNLREISLFPMNQQALDLLMGAPNEATPKQMKELHIRPALPAK 590


>gi|163737749|ref|ZP_02145166.1| aspartyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161389275|gb|EDQ13627.1| aspartyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 592

 Score =  661 bits (1705), Expect = 0.0,   Method: Composition-based stats.
 Identities = 330/596 (55%), Positives = 428/596 (71%), Gaps = 4/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  S+VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS  F 
Sbjct: 1   MHDYRSHTCAELNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R    +N  I TG+IE+  + IE+L  +EELPL VFGE+EY
Sbjct: 61  EIEKVRSEWCIRIDGNVKARDESLVNDKIPTGEIEVFIRDIEVLGKSEELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + KN++ R+ +I S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQKNMLLRSNMIQSIRRRMWDKGFNEYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T++ V++GVFEEF  G  V + + ++ Y DA + YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQQDVFDTIQPVMQGVFEEFGKGRKVDSEWPQVSYKDAAKWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           + +EHF  S F +F+ +L             KGG  +R FCDRMN++A+ +G PG+ YIF
Sbjct: 301 DCSEHFRGSGFAIFANLLENEGTEIRAIPAPKGG--SRKFCDRMNKFAQGEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F S A  AR  I
Sbjct: 359 WRDQGEG-MEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKTFESVAGRARTVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+ + + F FCWI+DFP YE +EE  KIDF HNPF+MPQGGM++L  +D L++K +
Sbjct: 418 GEELGLTDKDRFAFCWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALL-SDPLAVKGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G  KE VE RFGG+  AFQ G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDR+VMLL    N+REV +FPM+Q   DL+M +PS    +QL ELGLR++   +
Sbjct: 537 AGIDRMVMLLADEANIREVIMFPMNQRAEDLMMSAPSEPMSDQLMELGLRVIPQDQ 592


>gi|260432891|ref|ZP_05786862.1| aspartyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416719|gb|EEX09978.1| aspartyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 591

 Score =  660 bits (1704), Expect = 0.0,   Method: Composition-based stats.
 Identities = 334/594 (56%), Positives = 433/594 (72%), Gaps = 4/594 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL  ++VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+ + DSA F 
Sbjct: 1   MHAYRSHTCADLTAANVGETVRLSGWVHRVRDHGGVLFIDLRDHYGVTQVLCDADSAAFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R  E +N  + TG+IE+  +++E+L  AEELPL VFG++EY
Sbjct: 61  ALEKVRSEWCIRIDGTVKARDPELVNPKLPTGEIEVYVRELEVLGAAEELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N+  R+ +I SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREAMQRNMALRSDVIASMRRRMWDQGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T++ VL G+FEEF  G  V   + +I Y DA   YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQQDVFDTIQPVLTGIFEEFGGGRKVDKVWPQISYKDAALWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F +F+K+L      E+ AIPA GGG +R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSDHFRGSGFAIFAKLLEQEGT-EIRAIPAPGGG-SRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E+G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  AR+ I
Sbjct: 359 WREGENG-MEAAGPLAKNIGPERTEAIRQQLGLGKGDAAFFLGGKPKAFEKVAGKARDVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+ + + F F WI+DFP YE +EE  +IDF HNPF+MPQGGME+L+G D L +K +
Sbjct: 418 GEELGLTDKDRFAFAWIVDFPIYEKDEETGEIDFEHNPFSMPQGGMEALQG-DPLEVKGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+ML+AF   G  ++ V++RFG L+ AF  G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHKPEIMLKAFELAGYGEDEVKSRFGALFNAFHYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           AGIDRIVMLL    N+REV +FPM+Q   DL+M +PS  + +QL ELGLRI+  
Sbjct: 537 AGIDRIVMLLADEANIREVMMFPMNQRAEDLMMRAPSDPTSDQLMELGLRIIPQ 590


>gi|83952777|ref|ZP_00961507.1| aspartyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83835912|gb|EAP75211.1| aspartyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 594

 Score =  659 bits (1701), Expect = 0.0,   Method: Composition-based stats.
 Identities = 326/598 (54%), Positives = 434/598 (72%), Gaps = 6/598 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL    VG  VRL+GWVHR+R HGG++F+D+RDHYGITQV+ +PDS  F 
Sbjct: 1   MHAYRSHTCADLNKDHVGQTVRLAGWVHRIRDHGGVLFVDLRDHYGITQVLCDPDSPVFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +RSEW + IDG V +R+   IN  + TG+IE+  + +E+L  A+ELPL VFG++EY
Sbjct: 61  QVEELRSEWCVRIDGEVKARAESLINPKLPTGEIEVYIRDVEVLGRAQELPLLVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N+  R+ ++ S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREAMQRNMTLRSDVVASIRRRMWDQKFREFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN--TVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFVEQ D+ +T+  V+ GVFEEF  G       ++ +I Y  A+ +YGTDKPDLRNPI 
Sbjct: 241 MSFVEQQDVFDTVAPVIAGVFEEFGGGRKVDAPGDWPQIPYASAMLKYGTDKPDLRNPIE 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M +V+EHF  S F +F+K+L  +   E+ AIPA  GG +R FCDRMN +A+ +G PG+ Y
Sbjct: 301 MQDVSEHFRGSGFAIFAKLLEQDGT-EIRAIPAPTGG-SRKFCDRMNAFAQKEGLPGMGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IFWR  E+G +   GP+AK++    TEAIR +L + +GD+ FF+ G P  F   A  AR+
Sbjct: 359 IFWRAGENG-MEAAGPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPDAFQRVAGKARD 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I +ELG+ + + F F WI+DFP YE +EE  +IDF HNPF+MPQGGM +L G D L++K
Sbjct: 418 VIGEELGLTDQDRFAFAWIVDFPIYEKDEETGEIDFEHNPFSMPQGGMAALDG-DPLAVK 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            +QYDL CNG+E+ SG IRNH  E+ML+AF   G  ++ V++RFG L+ AF  G PPHGG
Sbjct: 477 GWQYDLACNGYELVSGAIRNHKPEIMLKAFELAGYGEDEVKSRFGALFNAFHYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            AAGIDRIVMLL   +N+REV +FPM+Q   DL+M +PS  + +QL ELGLR++   +
Sbjct: 537 CAAGIDRIVMLLANQENIREVIMFPMNQRAEDLMMNAPSEPTSDQLMELGLRVMPREE 594


>gi|154253740|ref|YP_001414564.1| aspartyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|171769685|sp|A7HYC4|SYD_PARL1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|154157690|gb|ABS64907.1| aspartyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 607

 Score =  659 bits (1700), Expect = 0.0,   Method: Composition-based stats.
 Identities = 349/608 (57%), Positives = 454/608 (74%), Gaps = 10/608 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACF 59
           M  +R+H+ G+L  S VG  VRL+GWVHR R HGG++F+D+RD+YG+TQ+V +PD    F
Sbjct: 1   MSSFRSHTSGELRKSHVGETVRLAGWVHRKRDHGGLLFIDLRDNYGLTQLVFDPDRAEAF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
            +A+ +R+E+V+ I+G V++RSAETINAN+ TG IE++   +E+LS A++LPLPVFGE +
Sbjct: 61  ALAEKLRAEYVVAIEGKVVARSAETINANLPTGDIEIAVSSMEVLSEAQDLPLPVFGEPD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           YPE IR  YRFLDLRR+TLH+NI+ R++II  +R RM    F E  TPILTASSPEGARD
Sbjct: 121 YPEDIRLTYRFLDLRRETLHRNILLRSKIIADIRRRMTEVGFNEFQTPILTASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRMHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           EMSFV QDD+   +E VL G+FE+F+      S  F RI Y +AIR+YG+DKPDLRNPI+
Sbjct: 241 EMSFVTQDDVFAAIEPVLHGLFEKFAEGKKVSSYPFTRIPYAEAIRKYGSDKPDLRNPIV 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M +VT+HF  S F+VF+ ++  +   EVWAIPA GGG NRAFCDRMN WA+ +GQPGL Y
Sbjct: 301 MESVTDHFRGSGFKVFAGLIEKDSKVEVWAIPAPGGG-NRAFCDRMNSWAQGEGQPGLGY 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IF+R +E G + G GPVAK++    TEAIR +L ++ GD+ FF+AG P K  SFA  AR 
Sbjct: 360 IFFR-EEGGALEGAGPVAKNIGPERTEAIRTQLGLKAGDAVFFVAGVPAKTASFAGLART 418

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  ELG+I  + F+FCWI+DFP +EWNE+EKKIDF+HNPF+MP   ++     D  +  
Sbjct: 419 RVGTELGLIEEDIFKFCWIVDFPMFEWNEDEKKIDFSHNPFSMPNYPLDKFLKLDKDNAD 478

Query: 479 ------AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                 AFQYD+VCNG E++SG IRNH  +VM +AF   G  K VVE +FGG+  AF+ G
Sbjct: 479 EILGMTAFQYDIVCNGVELSSGAIRNHKPDVMYKAFEIAGYDKSVVETKFGGMLNAFKYG 538

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG+A GIDR+VMLL G +N+REV++FPM+Q   DLLM +PS V  +QL+EL +R+V
Sbjct: 539 APPHGGLAPGIDRMVMLLAGVENLREVTMFPMNQQAQDLLMQAPSEVEPKQLKELHIRVV 598

Query: 593 ENPKKILK 600
              +K  +
Sbjct: 599 PPLEKKKE 606


>gi|220903296|ref|YP_002478608.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219867595|gb|ACL47930.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 627

 Score =  659 bits (1700), Expect = 0.0,   Method: Composition-based stats.
 Identities = 244/607 (40%), Positives = 357/607 (58%), Gaps = 14/607 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           +R+ +CG+L +++ G  V L GWV   R HGG+IF+D+RD  G+TQVV +PD      + 
Sbjct: 30  HRSQTCGELTLANNGQEVCLMGWVQYRRDHGGLIFVDLRDRSGLTQVVFSPDAAPEAHKN 89

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+VL I GLV  R    +N N++TG+IE+   + ++L+ ++  P  +    +  
Sbjct: 90  AHILRSEYVLAIKGLVRPRPEGMVNPNMVTGEIEVVVTEWKLLNTSKTPPFTIENRCDAG 149

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R  +R+LDLRR  +  N+  R ++   +R  +  + F+E  TP+LT S+PEGARDFL
Sbjct: 150 ENLRLAWRYLDLRRPRMQDNLRLRHKVAQCIRRHLDEDGFVEVETPVLTKSTPEGARDFL 209

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM +G DRYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 210 VPSRLNTGEFYALPQSPQLFKQLLMVAGMDRYFQIVRCFRDEDLRADRQP-EFTQVDIEM 268

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF +++ ++   E ++  VF +      +S  F R+ +D+A+ RYG DKPD R  + + +
Sbjct: 269 SFADEETVMGMAEKLMARVFRDVMGKE-LSLPFPRMPWDEAMARYGVDKPDTRFGLELVD 327

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE    S F++F+    V            G    R   D   E+ +  G  GLA+I  
Sbjct: 328 ITEIVRGSGFKLFATAPLVKGM-----RVPGGESMTRKEIDAFTEFVKIYGAQGLAWIKI 382

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE        P+AK L+    + I   LD+Q GD  FF AG+P    +   + R H+A
Sbjct: 383 KADE-----WQSPIAKFLSDEERKGIAAALDLQVGDIVFFQAGEPGMVNAALGNLRVHLA 437

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             + +I  N F F W+ DFP YE++EEEK+    H+PFT P  G   L  +D    +A  
Sbjct: 438 DHMNLIPENTFNFLWVTDFPLYEYDEEEKRYVACHHPFTSPAPGHMELMTSDPARARARA 497

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  EV  + F  +G + E  E++FG L +A + G PPHGG+A 
Sbjct: 498 YDMVLNGSEVGGGSIRIHSGEVQRRMFEALGFTPEQAESQFGFLIQALEHGAPPHGGLAF 557

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKI 601
           G+DR++MLL GA ++R+V  FP +Q    L+  +PS V+ +QLRELGLR+ E P +  K 
Sbjct: 558 GLDRLIMLLAGASSIRDVIAFPKTQKATCLMTDAPSPVAAKQLRELGLRLREQPGEKGKT 617

Query: 602 SVTTILR 608
                  
Sbjct: 618 DKPGEAE 624


>gi|297717790|gb|ADI50038.1| aspartyl-tRNA synthetase [Candidatus Odyssella thessalonicensis
           L13]
          Length = 596

 Score =  659 bits (1699), Expect = 0.0,   Method: Composition-based stats.
 Identities = 329/599 (54%), Positives = 421/599 (70%), Gaps = 7/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CG L   D G  VRLSGWVHR R HG ++F+DIRDHYGITQ V + D+  F+
Sbjct: 1   MHSYRSHTCGQLRKKDAGQTVRLSGWVHRKRDHGNLLFIDIRDHYGITQCVVSTDTPSFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA+SVR+E V+ +DG+V+ R+ +T+N  + TG+IE+    IEILS AE LPL V  + ++
Sbjct: 61  IAESVRNESVIRLDGIVVERAVDTVNPRMDTGEIEIQVSDIEILSTAETLPLQVNSDSDF 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YRFLDLR++ LH+NI+ R+++I S+R RMI + F+E  TPILTASSPEGARDF
Sbjct: 121 PEETRLRYRFLDLRKEKLHQNIILRSQVITSLRRRMIEQGFLEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N GSFYALPQAPQ +KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 181 LVPSRLNPGSFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN-TVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+   +E VL GVFEEF+ G       F RI Y++++ +YG DKPDLRNPI +
Sbjct: 241 MSFVTQEDVFAAIEPVLYGVFEEFAGGKSVTPYPFPRISYEESMLKYGNDKPDLRNPIEI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V+E F+ S+F VFS I+S          P       R+F +++N+WAR  G PGL YI
Sbjct: 301 VDVSEIFLGSDFAVFSNIVSEGGVVRAIPAP-NSAAQPRSFFEKLNDWARGMGLPGLGYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +    +      GP+AK L     E +R   ++++GDS FF++  P      A  AR  
Sbjct: 360 TFTEGTAK-----GPIAKFLTEERLEKLRAVANLKEGDSVFFVSDKPKIAAKVAGLARTR 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           I Q+L II  N F+FCWI+DFP YE +EE  KIDF+HNPF+MPQGGME+L   D L+IKA
Sbjct: 415 IGQDLKIIENNAFKFCWIVDFPMYEQDEETGKIDFSHNPFSMPQGGMEALLTQDPLTIKA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           FQYD+VCNG E++SG IRNH+ EVM +AF  VG +KE VE RFGGL  AF+ G PPHGG 
Sbjct: 475 FQYDIVCNGIELSSGAIRNHLPEVMYKAFEIVGYTKEDVEKRFGGLLSAFKFGAPPHGGS 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           A G+DRIVM+L    N+REV  FPM+Q   DL+MG+PS V  E+L+EL L +    K  
Sbjct: 535 APGVDRIVMVLADEPNIREVIAFPMNQQAQDLMMGAPSIVDKERLKELCLEVRLPFKPA 593


>gi|167646519|ref|YP_001684182.1| aspartyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189082089|sp|B0SWQ6|SYD_CAUSK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167348949|gb|ABZ71684.1| aspartyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 609

 Score =  659 bits (1699), Expect = 0.0,   Method: Composition-based stats.
 Identities = 336/614 (54%), Positives = 435/614 (70%), Gaps = 24/614 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  SD G+ VR+SGW+HR R HGG++F+D+RDHYG+TQ+V +P++  F+
Sbjct: 1   MHAYRTHTCGALRASDTGASVRVSGWIHRKRDHGGLVFIDLRDHYGLTQLVLHPETPGFD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + +R+E V+ IDG V++R A  +N N+ TG+IE+    +E+LS A ELPLPVFGE +Y
Sbjct: 61  VVERLRAESVIKIDGEVVARDAAAVNPNLPTGEIEIRVSAVEVLSEAAELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR K+R+LDLRR+TLHKNIV R+R+I S+R RM A+ F E  TPILTASSPEGARDF
Sbjct: 121 PEEIRLKHRYLDLRRETLHKNIVLRSRVIQSIRSRMFAQGFNEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADRSL-EFYQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS------------------NGNTVSNNFLRICYDDA 282
           MSFV Q+D+   +E V+ GVFEEFS                          F R+ Y  +
Sbjct: 240 MSFVTQEDVFAAIEPVMHGVFEEFSAGKPVSPIDGVHTFTNDFGATLEHRGFERLTYAQS 299

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +  YG+DKPDLRNPI M +V+EHF    F +F+KIL  +P   VWAIPA  GG +RAFCD
Sbjct: 300 MAWYGSDKPDLRNPIKMQDVSEHFRDGGFGLFAKILGADPKNRVWAIPAPTGG-SRAFCD 358

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
           RMN WA+ +GQPGL Y F+  D++G     GP+AK+L     + I  +L +   D+ FF+
Sbjct: 359 RMNSWAQGEGQPGLGYAFFSKDQNG---WGGPIAKNLG-EGFQPIADQLGLTHDDAVFFV 414

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           AGDP  F  FA  AR  +  EL +++   F+FCWI+DFP +EWNE+EKK+DF+HNPF+MP
Sbjct: 415 AGDPAVFAKFAGLARTRVGTELKLVDEEQFKFCWIVDFPMFEWNEDEKKVDFSHNPFSMP 474

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           QGG+E+L+  D L+I+A+QYD+VCNG+E+ SG IRNH  E+ML+AF   G   EVVE +F
Sbjct: 475 QGGLEALETQDPLTIRAYQYDIVCNGYELCSGAIRNHKPEIMLKAFEVAGYGAEVVEEQF 534

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           GG+  AF+ G PPHGG+A GIDRIVMLL     +REV  FP++Q   DLLM +P+     
Sbjct: 535 GGMLNAFRYGAPPHGGLAPGIDRIVMLLAEQVAIREVIAFPLNQQGQDLLMNAPAEAQDR 594

Query: 583 QLRELGLRIVENPK 596
           Q +EL +R     K
Sbjct: 595 QYKELYIRSAPPIK 608


>gi|85705180|ref|ZP_01036280.1| aspartyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85670502|gb|EAQ25363.1| aspartyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 591

 Score =  659 bits (1699), Expect = 0.0,   Method: Composition-based stats.
 Identities = 321/595 (53%), Positives = 427/595 (71%), Gaps = 4/595 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+HSC DL  SDVG  VRL+GWVHR+R HGG++F+D+RDHYG+TQ++ +PDS  F 
Sbjct: 1   MHAYRSHSCADLTKSDVGGDVRLAGWVHRIRDHGGVLFIDLRDHYGVTQLICDPDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +RSE+ + IDG+V +R+   INA I TG+IE+  +++E+L  + ELPL VFG++EY
Sbjct: 61  RVEKLRSEFCIRIDGVVKARAEGLINAKIPTGEIEVFVRELEVLGASNELPLQVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R ++R+LDLRR+ + +N+V R+ ++ +MR RM    F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRFRYLDLRREAMQRNMVLRSDVVAAMRRRMWDRGFREFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ V++G+FEEF  G  V  ++ +I Y D+   YGTDKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVIQGIFEEFGAGAVVDTDWPQISYADSALWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F +F+K+L  +          KGG  +R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 DVSEHFRGSGFAIFAKLLEQDGTEIRAIPAPKGG--SRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  AR  I
Sbjct: 359 WRET-DGVMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPQAFERVAGKARTVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             ELG+ + N F F WI+DFP YE +E   K+DF+HNPF+MPQGG+E+L G D L +  +
Sbjct: 418 GDELGLTDQNRFAFAWIVDFPMYEADENTGKVDFSHNPFSMPQGGIEALNG-DPLKVLGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  ++M++AF   G  ++ V  RFGG+  AFQ G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHKLDIMIKAFELAGYGEDEVRKRFGGMVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           AGIDRIVMLL G  N+REV +FPM+Q   DL+M +PS  + +QL ELGLR++   
Sbjct: 537 AGIDRIVMLLAGTSNIREVIMFPMNQRAEDLMMNAPSDPTSDQLMELGLRVIPQE 591


>gi|78043789|ref|YP_361017.1| aspartyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|97196601|sp|Q3AA17|SYD_CARHZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|77995904|gb|ABB14803.1| aspartyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 592

 Score =  659 bits (1699), Expect = 0.0,   Method: Composition-based stats.
 Identities = 241/596 (40%), Positives = 354/596 (59%), Gaps = 10/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            R+H CG+L     G  V L+GWV R R HGG+IF+D+RD  GI QVV +PD     F +
Sbjct: 3   KRSHYCGELRKEHAGQKVILNGWVQRRRDHGGLIFVDLRDRSGIVQVVFSPDVDLEAFRV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A++VR+E+VL I+G V  R   T N N++TG++E+ A K+E+L+ A+  P  +    +  
Sbjct: 63  AEAVRNEYVLAIEGTVRLRPEGTENPNLLTGEVEVYASKVEVLNKAKTPPFYIEDGIDVD 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +YR+LDLRR  + + +  R +   ++R  +    F E  TP+LT S+PEGARDFL
Sbjct: 123 EQVRLRYRYLDLRRPEMQRALELRHKAAKAVRDFLDRHGFWEIETPMLTKSTPEGARDFL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQ+LM +G +RYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 183 VPSRLNPGKFYALPQSPQIFKQILMVAGMERYFQIVRCFRDEDLRADRQP-EFTQIDIEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++++DI++ ME ++  VF+E      V   F RI Y +A+ +YGTDKPDLR  + + +
Sbjct: 242 SFIDREDIMSLMEEMIAYVFKEAIGVE-VKTPFKRISYQEAMLKYGTDKPDLRFGLEITD 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VTE     EF+VF  +                G  +R   D + ++  + G  GLAY+  
Sbjct: 301 VTELVKDVEFKVFQTVAHAGGVIRGLNAKGCAG-FSRKDLDDLTKFVGNFGAKGLAYLIL 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                       P+AK        A+   L  + GD  FF+A  P        + R H+A
Sbjct: 360 T-----PEEVKSPIAKFFKEEELRALINALQGEPGDILFFVADKPEVAAQALGNLRLHLA 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG+I  N F F W++DFP  E++ EEK+    H+PFT P      L   + L ++A  
Sbjct: 415 ERLGLIPENEFNFLWVIDFPLLEYDNEEKRFVAMHHPFTAPMDEDLPLMDENPLLVRAKA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  ++  + F  +G+S+E  + +FG +  AF+ G PPHGGIA 
Sbjct: 475 YDMVLNGVEIGGGSIRIHRRDIQEKMFKLIGLSEEEAKEKFGFMLEAFEYGTPPHGGIAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G DR+VML+ G +++R+V  FP +Q+  DL++G+P+ V   QL+EL +++    K+
Sbjct: 535 GFDRLVMLMAGRESIRDVIAFPKTQSATDLMVGAPNVVERRQLKELHIKVDLPVKE 590


>gi|299133732|ref|ZP_07026926.1| aspartyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298591568|gb|EFI51769.1| aspartyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 590

 Score =  658 bits (1698), Expect = 0.0,   Method: Composition-based stats.
 Identities = 369/591 (62%), Positives = 457/591 (77%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  SD+ S VRLSGW HR+R HGG++F+D+RDHYG+TQ V +PDS  F+
Sbjct: 1   MHRYRSHTCGALRESDIDSNVRLSGWCHRIRDHGGLLFIDLRDHYGMTQCVIDPDSKAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSEWV+ IDG V  R   T N ++ TG +E+    IE+L  A ELPLPVFG+ EY
Sbjct: 61  LAEKLRSEWVVKIDGKVRRRPEGTDNPDLPTGAVEVFIADIEVLGEAAELPLPVFGDLEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+ LH+NI+ R +II+SMR RM  E F E  TPILTASSPEGARDF
Sbjct: 121 PEEVRLKYRFLDLRREKLHQNIMTRGQIIDSMRARMKKEGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHAGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV QDD+   ME V+ GVFE+F+NG  V+ N+ RI + +++R+YGTDKPDLRNP+IM 
Sbjct: 241 MSFVTQDDVFAAMEPVITGVFEDFANGKPVTKNWPRIPFAESLRKYGTDKPDLRNPLIMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+EHF  S F+VF+++L      EVWAIP  GGG +RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 NVSEHFRGSGFKVFARMLEQAGN-EVWAIPGPGGG-SRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G     GP+A ++    T AIR +L ++DGD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WREGGEG----AGPLANNIGPERTAAIRTQLGLKDGDAAFFVAGDPQKFWKFAGLARTKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + FE  WI+DFP YE+NEEEKK+DF+HNPF+MPQGG+E+L+  D L+IKAF
Sbjct: 415 GEELNLIDKDRFELAWIVDFPMYEYNEEEKKVDFSHNPFSMPQGGLEALQTQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH    M++AF   G  +E V  RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDIACNGYEIASGGIRNHKPAAMVKAFEIAGYGEETVVERFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS VS +QLREL +R+
Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSDVSTKQLRELHIRL 585


>gi|110678506|ref|YP_681513.1| aspartyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|122972984|sp|Q16B16|SYD_ROSDO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|109454622|gb|ABG30827.1| aspartyl-tRNA synthetase, putative [Roseobacter denitrificans OCh
           114]
          Length = 591

 Score =  658 bits (1698), Expect = 0.0,   Method: Composition-based stats.
 Identities = 335/594 (56%), Positives = 426/594 (71%), Gaps = 4/594 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL   DVG  VRLSGWVHRVR HGG++F+D+RDHYGITQV+ +PDS  FE
Sbjct: 1   MHMYRSHTCADLSAQDVGKTVRLSGWVHRVRDHGGVLFIDLRDHYGITQVLCDPDSPVFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR+EW + +DG+V +R A  IN  I TG+IEL  + +E+L  +EELPL VFG++EY
Sbjct: 61  QMEQVRAEWCIRVDGVVKARDASLINPKISTGEIELFVKDLEVLGASEELPLQVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYR+LDLRR  +  N+  R+ ++ S+R +M   +F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLKYRYLDLRRANMQANMKLRSDVVASLRQQMWKADFREFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGRFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ + ++ VL  VFE+F NG  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQQDVFDVIQPVLTQVFEQFGNGKAVDQEWPQISYKDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F +F+ +L      E+ AIPA GGG +R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 SVSEHFAGSGFAIFANLLEQEGT-EIRAIPAPGGG-SRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR   +G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F + A  ARNHI
Sbjct: 359 WRDQGAG-MEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKAFETVAGKARNHI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             ELG+ + N F F WI+DFP YE + E  +IDF HNPF+MPQGG+E+L+G D LS+  +
Sbjct: 418 GMELGLTDQNRFAFAWIVDFPIYEKDSETGRIDFEHNPFSMPQGGLEALQG-DPLSVVGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G  ++ V  RFGG+  AFQ G PPHGG A
Sbjct: 477 QYDLSCNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVRKRFGGMVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           AGIDRIVMLL    N+REV LFPM+Q   DL+M +PS    EQL ELGLR++  
Sbjct: 537 AGIDRIVMLLAEEANIREVILFPMNQRAEDLMMSAPSEPESEQLMELGLRVIPK 590


>gi|212638575|ref|YP_002315095.1| aspartyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|226735098|sp|B7GFR1|SYD_ANOFW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|212560055|gb|ACJ33110.1| Aspartyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 592

 Score =  658 bits (1698), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/594 (39%), Positives = 348/594 (58%), Gaps = 9/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG++    +G  VRL GWV + R  GG+IF+D+RD  GI Q+V +PD      ++A
Sbjct: 4   RTHYCGEVTDMAIGQTVRLKGWVQKRRDLGGLIFIDLRDRTGIVQIVFSPDVSKEALQVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    +N N+ TG IE+ A  + ILS A+  P  +  + +  E
Sbjct: 64  ETIRSEYVLDVEGTVVQREEGQVNPNLPTGTIEVHAMHVTILSEAKTPPFLISDKTDVSE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + +    R ++  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFQTFKMRHQVTKAIRDFLDEEGFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GF+RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHPGEFYALPQSPQIFKQLLMVAGFERYYQIARCFRDEDLRADRQP-EFTQVDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QDDIL  +E ++  V +  + G  +S  F R+ YD+AI RYG+DKPD R  + + ++
Sbjct: 243 FMSQDDILAMIERMMARVMK-VAKGVDISIPFPRMSYDEAIARYGSDKPDTRFGLELVDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +   +       +R   D + E+    G  GLA++   
Sbjct: 302 SEQVKDCGFKVFASAVQNGGQVKAINVKGAADKYSRKDIDALTEYVARYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK       + +   L+ + GD   F+A             R  + +
Sbjct: 362 AD-----GLKGPIAKFFTEDEQKQMMQTLEAETGDLLLFVADKKSVVADALGALRLKLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +I+ + F F WI D+P +E++EEE +   AH+PFTMP          D  S++A  Y
Sbjct: 417 DLQLIDESAFHFLWITDWPLFEYDEEEGRYYAAHHPFTMPVREDVPKFETDPASVRAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R    ++  + F  +G ++E    +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIFERDIQEKMFKTLGFTEEQAREQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR+VMLL G  N+R+   FP + +   LL  +PS VS EQL EL LRI +  K
Sbjct: 537 LDRLVMLLAGRSNLRDTIAFPKTASASCLLTEAPSAVSEEQLEELHLRIKDVQK 590


>gi|94497625|ref|ZP_01304193.1| aspartyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94422842|gb|EAT07875.1| aspartyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 594

 Score =  658 bits (1697), Expect = 0.0,   Method: Composition-based stats.
 Identities = 343/601 (57%), Positives = 443/601 (73%), Gaps = 10/601 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L ++D G+ VR+SGWVHR R HG ++F+D+RDHYG+ Q+V   D   F+
Sbjct: 1   MHAYRTHTCGALTIADAGNEVRVSGWVHRKRDHGDLVFIDLRDHYGMVQIVTEVDGPVFQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + +R+E V+ + G V++R+ E +N N+ TG+IE+ A    +LS A +LPLPV GE++Y
Sbjct: 61  VIEGLRAESVVTVTGKVVARATEAVNPNLPTGEIEIRALDAAVLSAAADLPLPVAGEQDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YRFLDLRR+TLH NIVKRT+II+ MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLRYRFLDLRRETLHANIVKRTKIISDMRRRMEGAGFTEYSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT--VSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+D+ NTME V+  VFE FS+G     + +F RI + +A+ +YG+DKPDLRNPII
Sbjct: 241 MSFVTQEDVWNTMEPVIAQVFEAFSDGKPVTPAGSFPRIPHAEAMLKYGSDKPDLRNPII 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357
           + +VT+HF+ S F +F+ +  V+ G  + AIPA G G G+R F D MN WAR +G  GL 
Sbjct: 301 IQDVTDHFIGSGFGIFASL--VDGGARIRAIPAPGAGAGSRKFFDDMNVWARGEGYSGLG 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI  +    G     GP+AK+     T  +   L +   D  FF AG   +    A  AR
Sbjct: 359 YINIKDGVPG-----GPIAKNHGPEATAKLIEALGLGPNDGVFFAAGKEAQAAKLAGLAR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + ++L +I+ + FE CWI+DFPFYE++E+ K IDFAHNPF+MPQGG+++L+  D L+I
Sbjct: 414 IRVGEQLDLIDKDRFELCWIVDFPFYEYDEDTKSIDFAHNPFSMPQGGLDALENQDPLTI 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            AFQYD+VCNG+EIASG IRN   ++M++AF  VG+SK  VE RFGGLYRAFQ G PPHG
Sbjct: 474 NAFQYDMVCNGYEIASGSIRNQSPDLMVKAFELVGLSKADVEERFGGLYRAFQYGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+AAG+DRIVMLL GA+N+RE++LFPM+Q   DLLMG+PS V  +QLREL +R+VE   K
Sbjct: 534 GMAAGVDRIVMLLCGAQNLREITLFPMNQRAEDLLMGAPSAVEFKQLRELHVRVVEPQAK 593

Query: 598 I 598
            
Sbjct: 594 A 594


>gi|89071136|ref|ZP_01158334.1| aspartyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89043321|gb|EAR49544.1| aspartyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 592

 Score =  658 bits (1697), Expect = 0.0,   Method: Composition-based stats.
 Identities = 335/596 (56%), Positives = 428/596 (71%), Gaps = 4/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH +RTH+C DL   DVG  VRLSGWVHRVR HGG++F+D+RDHYGITQV+ +PDS  F 
Sbjct: 1   MHAFRTHTCADLTRDDVGETVRLSGWVHRVRDHGGVLFIDLRDHYGITQVLCDPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG+V +R+AE +N  I TG+IE+  + IE+L  ++ELPL VFG++EY
Sbjct: 61  EVEKVRSEWCVRIDGVVKARAAELVNPKIPTGEIEVYIRDIEVLGASKELPLIVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + KN+  R+ ++ +MR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREAMQKNMTLRSDVVAAMRRRMWDKGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ V+ GVFEEF  G  V   + +I Y D+   YGTDKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVMTGVFEEFGGGRKVDEVWPQISYKDSALWYGTDKPDLRNPIKME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L  +   E+ AIPA GGG +R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSEHFAGSGFAIFAKLLEQDGT-EIRAIPAPGGG-SRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E+G V   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  ARN I
Sbjct: 359 WRDGENG-VEAAGPLAKNIGPERTEAIRTQLGLGKGDAAFFLGGKPSSFERVAGLARNVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL + +   F F WI+DFP YE +EE   +DF+HNPF+MPQGG  +L G D L +  +
Sbjct: 418 GEELNLTDKERFAFAWIVDFPMYERDEETGAVDFSHNPFSMPQGGRGALDG-DPLEVLGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G  ++ V  RFGG+  AFQ G PPHGG A
Sbjct: 477 QYDLACNGYELISGAIRNHKPEIMFKAFELAGYGEDEVRKRFGGMVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIDR+VMLL    N+REV LFPM+Q   DL+M +PS  + EQLREL LR++   +
Sbjct: 537 VGIDRVVMLLADETNIREVILFPMNQRAEDLMMDAPSEPTNEQLRELRLRVLPPEE 592


>gi|221640277|ref|YP_002526539.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254781748|sp|B9KME7|SYD_RHOSK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|221161058|gb|ACM02038.1| Aspartyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 591

 Score =  657 bits (1696), Expect = 0.0,   Method: Composition-based stats.
 Identities = 343/594 (57%), Positives = 440/594 (74%), Gaps = 4/594 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  + VG  VRLSGWVHRVR HGG++FLD+RDHYGITQV+A+ DS  F 
Sbjct: 1   MHAYRSHTCTELNAAHVGQEVRLSGWVHRVRDHGGVLFLDLRDHYGITQVIADADSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             ++VR+EWV+ I+G V +R A  +N  + TG+IE+ A  + +L  A+ELPLPVFGE +Y
Sbjct: 61  ELETVRAEWVIRIEGRVKARDASLVNPKLATGEIEVYATGMSVLGAADELPLPVFGETDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R  YRFLDLRR+ LH+N++ R+ ++ S+R RM    F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLTYRFLDLRREKLHQNMMLRSNVVRSLRNRMWGAGFNEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   ++ V++G+FEEF +G  V  ++ RI Y DA+  YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVFAAVQPVIQGLFEEFGHGKRVEADWPRIAYRDAMLWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L      E+ AIPA  GG +R FCDRMN +A+SQG PG+ YIF
Sbjct: 301 VVSEHFAGSGFAIFAKLLENEGT-EIRAIPAPTGG-SRKFCDRMNAFAQSQGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  + G +   GP+AK++    TEAIR +L + +GD+ FF+ G P  F + A  AR  I
Sbjct: 359 WRKGDDGAMEAAGPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPETFEAVAGRARTEI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+   NCF+F WI+DFP YE + +E KIDF+HNPF+MPQGGME+L+G D L + A+
Sbjct: 419 GRELGLTEENCFKFAWIVDFPMYEKD-DEGKIDFSHNPFSMPQGGMEALEG-DPLKVHAY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SGGIRNH  E+M +AF   G  KE VE RFGG+ +AF+ G PPHGG A
Sbjct: 477 QYDLACNGYELISGGIRNHKPEIMFKAFELAGYPKEEVEKRFGGMVKAFRYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           AGIDRIVMLL    N+REV +FPM+Q   DLLMG+PS  + EQLREL LR+V  
Sbjct: 537 AGIDRIVMLLADEANIREVIMFPMNQRAEDLLMGAPSEPTNEQLRELRLRVVPK 590


>gi|77464390|ref|YP_353894.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|126463232|ref|YP_001044346.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|97196839|sp|Q3IZP1|SYD_RHOS4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225380|sp|A3PMK8|SYD_RHOS1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|77388808|gb|ABA79993.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|126104896|gb|ABN77574.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 591

 Score =  657 bits (1696), Expect = 0.0,   Method: Composition-based stats.
 Identities = 343/594 (57%), Positives = 440/594 (74%), Gaps = 4/594 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  + VG  VRLSGWVHRVR HGG++FLD+RDHYGITQV+A+ DS  F 
Sbjct: 1   MHAYRSHTCTELNAAHVGQEVRLSGWVHRVRDHGGVLFLDLRDHYGITQVIADADSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             ++VR+EWV+ I+G V +R A  +N  + TG+IE+ A  + +L  A+ELPLPVFGE +Y
Sbjct: 61  ELETVRAEWVIRIEGRVKARDASLVNPKLATGEIEVYATGMSVLGAADELPLPVFGETDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R  YRFLDLRR+ LH+N++ R+ ++ S+R RM    F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLTYRFLDLRREKLHQNMMLRSNVVRSLRNRMWGAGFNEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   ++ V++G+FEEF +G  V  ++ RI Y DA+  YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVFAAVQPVIQGLFEEFGHGKRVDADWPRIAYRDAMLWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L      E+ AIPA  GG +R FCDRMN +A+SQG PG+ YIF
Sbjct: 301 VVSEHFAGSGFAIFAKLLENEGT-EIRAIPAPTGG-SRKFCDRMNAFAQSQGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  + G +   GP+AK++    TEAIR +L + +GD+ FF+ G P  F + A  AR  I
Sbjct: 359 WRKGDDGAMEAAGPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPETFEAVAGRARTEI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+   NCF+F WI+DFP YE + +E KIDF+HNPF+MPQGGME+L+G D L + A+
Sbjct: 419 GRELGLTEENCFKFAWIVDFPMYEKD-DEGKIDFSHNPFSMPQGGMEALEG-DPLKVHAY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SGGIRNH  E+M +AF   G  KE VE RFGG+ +AF+ G PPHGG A
Sbjct: 477 QYDLACNGYELISGGIRNHKPEIMFKAFELAGYPKEEVEKRFGGMVKAFRYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           AGIDRIVMLL    N+REV +FPM+Q   DLLMG+PS  + EQLREL LR+V  
Sbjct: 537 AGIDRIVMLLADEANIREVIMFPMNQRAEDLLMGAPSEPTNEQLRELRLRVVPK 590


>gi|291533404|emb|CBL06517.1| aspartyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 600

 Score =  657 bits (1696), Expect = 0.0,   Method: Composition-based stats.
 Identities = 245/601 (40%), Positives = 357/601 (59%), Gaps = 11/601 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
             RTH CG+L  ++ G  V L GWV   R HGG+IF+D+RD  G+ Q+V   D      F
Sbjct: 7   MKRTHHCGELRATNEGQEVVLCGWVSHRRDHGGLIFIDLRDRSGLVQLVFAEDKIGADQF 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V  R  ETIN N+ TG+IE+ A+++ IL+ A   P  +    +
Sbjct: 67  PKAESLRSEFVVAVRGKVSLRDKETINPNMETGEIEIYAEELRILNKALTPPFYIQDGID 126

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E++R KYR+LDLRR  + KNI+ R R+   MR       F+E  TP+LT S+PEGARD
Sbjct: 127 VDENVRLKYRYLDLRRPEMQKNIMLRHRVTKLMRDYFDEHGFLEIETPMLTKSTPEGARD 186

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN G FYALPQ+PQ +KQLLM +G+++YFQI  CFRDED R+DR P EF QLD+
Sbjct: 187 YLVPSRVNPGKFYALPQSPQIFKQLLMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDI 245

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV+QD ILN ME ++ G+FE+      V   FLR+ +D+A+ RYG+DKPD+R  + +
Sbjct: 246 EMSFVDQDYILNLMEGLVSGLFEKTIG-EKVQTPFLRMTWDEAMERYGSDKPDIRFGMEL 304

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +++E+   S+F+VF  +L      +V  +        R   D + E+A+  G  GLA+I
Sbjct: 305 MDISEYVKGSDFKVFKSVLDNGGQVKVIKV-DGYANIPRRELDGLVEYAQRYGAKGLAWI 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +   E        P  K  +    + I+   + Q GD    +A  PL       + R  
Sbjct: 364 QYTETE-----IKSPFKKFYSEETFQKIKEATNAQTGDLLLVVADKPLVVAQALGELRLE 418

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +  G+IN N ++F W++DFP +E++EE K+    H+PFT P+         D   +KA
Sbjct: 419 MGRRRGLINENEYKFLWVVDFPMFEYDEENKRWKAMHHPFTAPRDEDVQYLTTDPGRVKA 478

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G +R + S+   + F  +G++ E    +FG +  AF+ G PPHGG+
Sbjct: 479 KAYDMVLNGVEIGGGSLRIYNSDTQEKVFEAIGLTPEQAHEKFGFMLDAFKYGTPPHGGL 538

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           A G+DR+VML+    ++R+V  FP +Q+   L+  +PS V  +QLREL +R    PKK  
Sbjct: 539 AFGLDRMVMLMAKRNSIRDVIPFPKTQSAGCLMTQAPSEVDAKQLRELSIRTAVAPKKKA 598

Query: 600 K 600
           +
Sbjct: 599 E 599


>gi|294013277|ref|YP_003546737.1| aspartyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292676607|dbj|BAI98125.1| aspartyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 594

 Score =  657 bits (1696), Expect = 0.0,   Method: Composition-based stats.
 Identities = 338/600 (56%), Positives = 437/600 (72%), Gaps = 8/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  ++VG+ VR+SGWVHR R HG ++F+D+RDHYG+ Q+V   D   F+
Sbjct: 1   MHAYRTHTCGALTTAEVGNEVRVSGWVHRKRDHGDLVFIDLRDHYGMVQIVTEVDGPVFQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + +S+R+E V+ + G V++R+ E +N N+ TG+IE+ A    +LS A +LPLPV GE+EY
Sbjct: 61  VIESLRAESVVTVTGKVVARAKEAVNPNLPTGEIEIRALDAVVLSAAADLPLPVAGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YRFLDLRR+TLH NIVKRT+II+ MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLRYRFLDLRRETLHANIVKRTKIISDMRRRMEGAGFTEYSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT--VSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+D+ NTME V+  VFE F++G     + +F RI + +A+ +YG+DKPDLRNPI+
Sbjct: 241 MSFVRQEDVWNTMEPVIAEVFEAFADGKPVTPAGSFPRIPHAEAMLKYGSDKPDLRNPIL 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +VTEHF  S F +F+ ++           P  G G +R F D MN WARS+G  GL Y
Sbjct: 301 ITDVTEHFHGSGFGIFASLVESGSVIRAIPAPGAGAG-SRKFFDDMNNWARSEGYSGLGY 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +    G     GP+AK+     T  +   L +   D  FF AG   +    A  AR 
Sbjct: 360 INIKDGVPG-----GPIAKNHGEERTAKLIEALGLGPNDGVFFAAGKEGQAAKLAGLARI 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++L +I+ + FE CWI+DFPFYE++E+ K IDFAHNPF+MPQGG+++L+  D LS+K
Sbjct: 415 RVGEQLDLIDRDRFELCWIVDFPFYEYDEDTKSIDFAHNPFSMPQGGLDALENQDPLSLK 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG+EIASG IRN   E+M++AF  VG+S+  VE RFGGLYRAFQ G PPHGG
Sbjct: 475 AYQYDMVCNGYEIASGSIRNQSPELMVKAFEKVGLSQADVEERFGGLYRAFQYGAPPHGG 534

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +AAG+DRIVMLL GA+N+RE++LFPM+Q   DLLMG+PS    +QLREL +R+VE   K 
Sbjct: 535 MAAGVDRIVMLLCGAQNLREITLFPMNQRAEDLLMGAPSPAEFKQLRELHIRVVEPQAKA 594


>gi|329890107|ref|ZP_08268450.1| aspartyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328845408|gb|EGF94972.1| aspartyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 610

 Score =  657 bits (1695), Expect = 0.0,   Method: Composition-based stats.
 Identities = 333/614 (54%), Positives = 439/614 (71%), Gaps = 23/614 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  +D G+ VRLSGW+HR R HGG++F+D+RDHYG+TQ+V +P++  FE
Sbjct: 1   MHAYRTHTCGALRSTDAGANVRLSGWIHRKRDHGGLLFIDLRDHYGLTQLVLHPETPGFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + +R+E V+ +DG V+ R   T+NAN+ TG++E+    +E+LS A ELP+PVFGE+EY
Sbjct: 61  VVERLRAESVIKVDGEVVLREGSTVNANLPTGEVEVRVLSVEVLSEAAELPMPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR   RFLDLRR+ LHKNIV R+R+I S+R RM+A+ F+E  TPILTASSPEGARDF
Sbjct: 121 PEEIRLSNRFLDLRRERLHKNIVLRSRVIQSIRTRMVAQGFLEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADRSL-EFYQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEF------------------SNGNTVSNNFLRICYDDA 282
           MSFV Q+D+   +E ++ G+F EF                           F R+ ++ +
Sbjct: 240 MSFVTQEDVFQAIEPLMHGLFTEFGEGKPVSPIDGTHVFTNDFGQTMEHKGFERLTFEQS 299

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           ++ YG+DKPDLRNPI M +V++HF    F +F+KIL  +    VWAIPA  GG +RAFCD
Sbjct: 300 MKWYGSDKPDLRNPIKMQDVSDHFRDGGFGLFAKILGADEKNAVWAIPAPTGG-SRAFCD 358

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
           RMN WA+ +GQPGL YIFW  D+    +  GP+AK+L    T+A+   L +  GD+ FF 
Sbjct: 359 RMNSWAQGEGQPGLGYIFWSDDQQ---SWGGPIAKNLGQEPTQALMTSLGLGKGDAAFFT 415

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           AG P  F  FA  AR  +  EL +++ + F+FCWI+DFP +EW+EEEKK+DF+HNPF+MP
Sbjct: 416 AGLPSVFAKFAGLARTRVGTELKLVDEDQFKFCWIVDFPMFEWSEEEKKVDFSHNPFSMP 475

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           QGGME+L+  D L+I+A+QYD+VCNG+E+ SG IRNH +E+ML+AF   G    VVE +F
Sbjct: 476 QGGMEALETQDPLTIRAYQYDIVCNGYELCSGAIRNHKAEIMLKAFEIAGYDASVVEEQF 535

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           GG+  AF+ G PPHGG+A GIDRIVMLL G + +REV  FP++Q   DLLM +P+ V   
Sbjct: 536 GGMLNAFRFGAPPHGGLAPGIDRIVMLLAGEQAIREVIAFPLNQQGQDLLMSAPAEVEER 595

Query: 583 QLRELGLRIVENPK 596
           QL+EL +R     K
Sbjct: 596 QLKELSIRTQLPIK 609


>gi|209885455|ref|YP_002289312.1| aspartyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|229470563|sp|B6JGJ7|SYD_OLICO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|209873651|gb|ACI93447.1| aspartyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 590

 Score =  657 bits (1695), Expect = 0.0,   Method: Composition-based stats.
 Identities = 363/591 (61%), Positives = 455/591 (76%), Gaps = 6/591 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  SD+ S VRLSGW HR+R HGG++F+D+RDHYGITQ V +PDS  F 
Sbjct: 1   MHRYRSHTCGALRESDIDSNVRLSGWCHRIRDHGGLLFIDLRDHYGITQCVVDPDSKAFR 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+++RSEWV+  DG V  R   T N  + TG +E+   +IE+L  A ELP+PVFG++EY
Sbjct: 61  LAETLRSEWVVKFDGRVRRRPDGTDNPELPTGAVEVFINEIEVLGEAAELPMPVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRRD LH+NI+ R +II+SMR RM    F E  TPILTASSPEGARDF
Sbjct: 121 PEEIRLKYRFLDLRRDRLHQNIMTRGKIIDSMRARMKEVGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   ME V+ GVFE+F++G  V+ N+ RI + +A+R+YGTDKPDLRNP+IM 
Sbjct: 241 MSFVTQEDVFAAMEPVITGVFEDFADGKPVTKNWPRIPFAEALRKYGTDKPDLRNPLIMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F+VF+++L      EVWAIP   GG +RAFCDRMN WA+ +GQPGL YI 
Sbjct: 301 DVSEHFRGSGFKVFARMLEQEGN-EVWAIPGPAGG-SRAFCDRMNSWAQGEGQPGLGYIM 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G     GP+A ++    T AIR +L +++GD+ FF+AGDP KF  FA  AR  +
Sbjct: 359 WREGGEG----AGPLANNIGPERTAAIRDQLGLKEGDAAFFVAGDPQKFWKFAGLARTKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + FE  WI+DFP YE+NE+EKK+DF+HNPF+MPQGG+E+L+  D L+IKAF
Sbjct: 415 GEELNLIDKDRFELAWIVDFPMYEYNEDEKKVDFSHNPFSMPQGGLEALQTQDPLTIKAF 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+ CNG+EIASGGIRNH    M++AF   G  +E V  RFGG+YRAFQ G PPHGG+A
Sbjct: 475 QYDIACNGYEIASGGIRNHKPAAMVKAFEIAGYGEETVIERFGGMYRAFQYGAPPHGGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AG+DRIVMLL G  N+RE+SLFPM+Q   DLLMG+PS V+ +QLREL +R+
Sbjct: 535 AGVDRIVMLLCGTNNLREISLFPMNQRAEDLLMGAPSDVTTQQLRELHIRL 585


>gi|114770404|ref|ZP_01447942.1| aspartyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114549241|gb|EAU52124.1| aspartyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 593

 Score =  657 bits (1694), Expect = 0.0,   Method: Composition-based stats.
 Identities = 334/595 (56%), Positives = 427/595 (71%), Gaps = 3/595 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M  +RTH+C DL  +DVG  VRLSGWVHRVR HGGI+F+D+RDHYGITQ++A+PDS  F+
Sbjct: 1   MQAFRTHTCSDLNANDVGQSVRLSGWVHRVRDHGGILFIDLRDHYGITQILADPDSPVFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG+V +R+ E +N  + TG++E+    +E+L  +EELPL +F E ++
Sbjct: 61  DLEKVRSEWCIRIDGVVKARAPELVNKKLPTGEVEIFISDMEVLGASEELPLQIFDEPDF 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYRFLDLRR+TLH NI+ R+ +I S+R RM ++ F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLKYRFLDLRRETLHNNIILRSNVIKSIRNRMDSQGFNEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQ++M +GFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQMIMVAGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ NT+E VL+G+FEEF  G ++S N+ +I Y D+   YGTDKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFNTIEPVLKGIFEEFGGGRSISKNWPQISYRDSALWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F +F+K+L             KGG  +R FCDRMN++A+ +G PG+ YIF
Sbjct: 301 IVSDHFKESGFAIFAKLLENEGTEVRAIPAPKGG--SRKFCDRMNKFAQQEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G +   GP+AK++    TEAIR +L +Q GD+ FF+AG P  F   A  AR  I
Sbjct: 359 WRDQGEG-LEAAGPLAKNIGPERTEAIRQQLGLQVGDAAFFLAGKPKAFEGVAGRARTVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL I N + FEF WI+DFP YE + E  KIDF+HNPF+MPQGGM +L   D  +I  +
Sbjct: 418 GEELKITNKDSFEFAWIVDFPMYEKDSETGKIDFSHNPFSMPQGGMAALDAEDPETILGY 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G   E V  RFGG+  AF  G PPHGG A
Sbjct: 478 QYDLACNGYELISGAIRNHNPEIMYKAFEIAGYPNEEVNKRFGGMVNAFTYGAPPHGGCA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           AGIDRIVMLL    N+R+V +FPM+Q   DL++G PS VS EQLREL LRI+   
Sbjct: 538 AGIDRIVMLLANEDNIRQVIMFPMNQRAEDLMLGGPSEVSNEQLRELNLRIMPQE 592


>gi|253574920|ref|ZP_04852260.1| aspartyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251845966|gb|EES73974.1| aspartyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 592

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 247/600 (41%), Positives = 353/600 (58%), Gaps = 10/600 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
             RTH CG L  +++G  V L+GWV   R  GG++F+D+RD  GI Q+V NP       +
Sbjct: 1   MKRTHHCGALSTANIGETVTLNGWVQTRRDLGGVLFIDLRDRSGIVQIVFNPAYSGEALK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA  VRSE+VL + G V++R  ET+N N+ TG IE+   +IE+L+ A+  P  +    E 
Sbjct: 61  IADRVRSEYVLAVTGKVVARDPETVNPNLPTGDIEVQITEIEVLNAAKTPPFFIEDGIEV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            ES+R KYR+LDLRR  + + +  R++     R  +  E FIE  TPILT SSPEGARD+
Sbjct: 121 DESLRLKYRYLDLRRPEMQQTLWLRSKAAKVFRDFLDGEGFIEVETPILTKSSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G F+ALPQ+PQ YKQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRVHPGEFFALPQSPQLYKQLLMVSGIERYYQIARCFRDEDLRADRQP-EFTQVDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ +D++L  ME ++  +F+E    +     F RI Y DA+ +YG+DKPDLR  + + 
Sbjct: 240 TSFLSRDELLEMMEKLIVRLFKETKGIDI-PTPFQRISYADAMDKYGSDKPDLRFGLELV 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV++   +S  +VFS ++      +V      G   +R   D +  +A   G  GLA+I 
Sbjct: 299 NVSDLVANSGVKVFSSVIEKGGEVKVLNAKGCGT-WSRKDIDDLGPYAARYGAKGLAWIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +  E       GP+ K       EAI+ R   ++GD   F A +           R  I
Sbjct: 358 VKEGE-----FRGPIVKFFTEQEIEAIKERTGAEEGDLLLFSADNKKVVADVLGALRLKI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++LG+I+ + ++F W++DFP   W+EE+K+    H+PFT P+     L   D   I A 
Sbjct: 413 GRDLGLIDDSVYKFAWVVDFPLLGWDEEQKRYVAEHHPFTRPRDEDLPLFDTDPGKILAQ 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  +V  + F  +G+S E  +++FG L  AF+ G PPHGGIA
Sbjct: 473 AYDLVLNGYEVGGGSMRIYKRDVQEKMFKAIGLSPEEAQDKFGYLMDAFEYGTPPHGGIA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G DR+VMLL G  N+RE   FP + +  DLLM SPS V   QL +L +++     ++ K
Sbjct: 533 FGFDRLVMLLAGRSNLRETIAFPKTASATDLLMNSPSEVDGSQLDQLHIKLAPKLAEVKK 592


>gi|332559281|ref|ZP_08413603.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332276993|gb|EGJ22308.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 591

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 343/594 (57%), Positives = 440/594 (74%), Gaps = 4/594 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  + VG  VRLSGWVHRVR HGG++FLD+RDHYGITQV+A+ DS  F 
Sbjct: 1   MHAYRSHTCTELNAAHVGQEVRLSGWVHRVRDHGGVLFLDLRDHYGITQVIADADSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             ++VR+EWV+ I+G V +R A  +N  + TG+IE+ A  + +L  A+ELPLPVFGE +Y
Sbjct: 61  ELETVRAEWVIRIEGRVKARDASLVNPKLATGEIEVYATGMSVLGAADELPLPVFGETDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R  YRFLDLRR+ LH+N++ R+ ++ S+R RM    F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLTYRFLDLRREKLHQNMMLRSNVVRSLRNRMWGAGFNEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   ++ V++G+FEEF +G  V  ++ RI Y DA+  YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVFAAVQPVMQGLFEEFGHGKRVDADWPRIAYRDAMLWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L      E+ AIPA  GG +R FCDRMN +A+SQG PG+ YIF
Sbjct: 301 VVSEHFAGSGFAIFAKLLENEGT-EIRAIPAPTGG-SRKFCDRMNAFAQSQGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  + G +   GP+AK++    TEAIR +L + +GD+ FF+ G P  F + A  AR  I
Sbjct: 359 WRKGDDGAMEAAGPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPETFEAVAGRARTEI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+   NCF+F WI+DFP YE + +E KIDF+HNPF+MPQGGME+L+G D L + A+
Sbjct: 419 GRELGLTEENCFKFAWIVDFPMYEKD-DEGKIDFSHNPFSMPQGGMEALEG-DPLKVHAY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SGGIRNH  E+M +AF   G  KE VE RFGG+ +AF+ G PPHGG A
Sbjct: 477 QYDLACNGYELISGGIRNHKPEIMFKAFELAGYPKEEVEKRFGGMVKAFRYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           AGIDRIVMLL    N+REV +FPM+Q   DLLMG+PS  + EQLREL LR+V  
Sbjct: 537 AGIDRIVMLLADEANIREVIMFPMNQRAEDLLMGAPSEPTNEQLRELRLRVVPK 590


>gi|114762107|ref|ZP_01441575.1| aspartyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114545131|gb|EAU48134.1| aspartyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 593

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 333/597 (55%), Positives = 429/597 (71%), Gaps = 6/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C  L   +VG  VRLSGWVHR+R HGGI+F+D+RDHYG+TQV+ +PDS  F 
Sbjct: 1   MHAYRTHTCAALTKENVGETVRLSGWVHRIRDHGGILFIDLRDHYGMTQVLCDPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR+EW + IDG+V +R AE +N  + TG+IE+  + IE+L  A+ELPL VFGE+EY
Sbjct: 61  EVEKVRAEWCIRIDGVVKARDAELVNPKLPTGEIEVFVRDIEVLGTAKELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + + +  R+ +++SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREEMQRAMTLRSDVVSSMRRRMWDKGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQ +KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQLFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q D+ +T+  V+ G+FEEF  G  V +   + +I Y +A  +YGTDKPDLRNPI 
Sbjct: 241 MSFVSQQDVFDTISPVIAGIFEEFGEGAKVDDPASWPQIPYHEAALKYGTDKPDLRNPIE 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M +V+EHF  S F +F+K+L  +   E+ AIPA  GG +R FCDRMN +A+ +G PG+ Y
Sbjct: 301 MQDVSEHFRGSGFAIFAKLLEQDGT-EIRAIPAPTGG-SRKFCDRMNAFAQKEGLPGMGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IFWR   +G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  AR+
Sbjct: 359 IFWRDQGNG-LEAAGPLAKNIGPERTEAIRQQLGLDVGDAAFFLGGKPSGFQRVAGKARD 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I +EL + + N F F WI+DFP YE +EE   IDF HNPF+MPQGG E+L G D L++K
Sbjct: 418 VIGEELNLTDKNRFAFAWIVDFPIYEKDEETGAIDFEHNPFSMPQGGAEALDG-DPLAVK 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            FQYDL CNG+E+ SG IRNH  EVML+AF   G  ++ V+ RF GLY AFQ G PPHGG
Sbjct: 477 GFQYDLACNGYELVSGAIRNHKPEVMLKAFEIAGYGEDEVKKRFAGLYTAFQYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            AAGIDRIVMLL G  N+REV +FPM+Q   DL+M +PS  S +QL EL LR++   
Sbjct: 537 CAAGIDRIVMLLAGTSNIREVIMFPMNQRAEDLMMQAPSEPSSDQLMELSLRVIPQE 593


>gi|163744719|ref|ZP_02152079.1| aspartyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161381537|gb|EDQ05946.1| aspartyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 591

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 332/595 (55%), Positives = 425/595 (71%), Gaps = 4/595 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL + + G  VRLSGWVHRVR HGG++FLD+RDHYGITQV+ +PDS  F 
Sbjct: 1   MHAYRSHTCADLSLENKGDNVRLSGWVHRVRDHGGVLFLDLRDHYGITQVICDPDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR+EW + IDG V +R    +N  + TG IE+ A++IE+L  A ELPL VFG++EY
Sbjct: 61  EMEKVRAEWCVRIDGTVKARDESLVNPKLPTGAIEVYAREIEVLGSAAELPLQVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + KN+  R+ ++ S+R RM  +NF E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQKNMTLRSDVVTSIRKRMWDQNFREFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T++ V+ G+FEEF  G  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQQDVFDTIQPVIAGIFEEFGGGKKVDETWEQISYKDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L  +   E+ AIPA  GG +R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSEHFRDSGFAIFAKLLEQDGT-EIRAIPAPTGG-SRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR   +G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F + A  ARN I
Sbjct: 359 WRDQGNG-MEAAGPLAKNIGPERTEAIRQQLGLNVGDAAFFLGGKPKSFEAVAGRARNVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL + + N F F WI+DFP YE +EE  KIDF HNPF+MPQGGM++L   D L +  +
Sbjct: 418 GEELNLTDKNRFAFAWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALLD-DPLKVLGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G  ++ V  RFGG+  AFQ G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVRKRFGGMVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           AGIDRIVMLL    N+REV LFPM+Q   DL+M +PS  + +QL ELGLR++   
Sbjct: 537 AGIDRIVMLLAEEANIREVILFPMNQRAEDLMMNAPSEPTSDQLMELGLRVIPQE 591


>gi|196250094|ref|ZP_03148788.1| aspartyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|196210278|gb|EDY05043.1| aspartyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 590

 Score =  656 bits (1692), Expect = 0.0,   Method: Composition-based stats.
 Identities = 241/595 (40%), Positives = 362/595 (60%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-- 62
           RT+ CG++  + VG  V L GWV + R  GG+IF+D+RD  GI QVVA+PD +   +A  
Sbjct: 3   RTYYCGEVPETAVGERVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVASPDVSVEALATA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VRSE+VL ++G V++R+ ET+N NI TG+IE+ A++I+I++ A+  P  +  + +  E
Sbjct: 63  ERVRSEYVLSVEGTVVARAPETVNPNIATGRIEVHAERIDIINEAKTPPFAIADDTDAAE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR T+ + +  R ++  ++R  +  E F+E  TP+LT S+PEGARD+LV
Sbjct: 123 DVRLKYRYLDLRRPTMFQTLELRHKVAKAVRNFLDGERFLEVETPMLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+QI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 183 PSRVHPGEFYALPQSPQIFKQLLMVGGFERYYQITRCFRDEDLRADRQP-EFTQIDIEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+Q+DI++  E ++  V +     +     F RI YD+A+ RYG+DKPD+R  + + +V
Sbjct: 242 FVDQEDIIDLTERMMAAVVKATKGIDI-PRPFPRITYDEAMSRYGSDKPDVRFGLELVDV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E    S F+VF++ +      +   +       +R   D + E+A   G  GLA++   
Sbjct: 301 SEAVRGSAFQVFARAVEQGGQVKAINVKGAASRYSRKDIDALAEFAGRYGAKGLAWLKV- 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G +   GP+AK        A+R  L  +DGD   F+A +     +     R  + +
Sbjct: 360 --EGGELK--GPIAKFFVDDEQTALRQLLAAEDGDLLLFVADEKAIVAAALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+     F W+ D+P  E++EEE +   AH+PFTMP      L   +  +++A  Y
Sbjct: 416 ELGLIDETKLAFLWVTDWPLLEYDEEEGRYYAAHHPFTMPVRDDIPLLETNPGAVRAQAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R    +V  + F  +G  +E    +FG L  AF+ G PPHGGIA G
Sbjct: 476 DLVLNGYELGGGSLRIFERDVQEKMFRALGFDQEEARRQFGFLLEAFEYGTPPHGGIALG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +P  VS +QL+EL L +V   ++
Sbjct: 536 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPGPVSEKQLKELHLAVVLPDQQ 590


>gi|254475910|ref|ZP_05089296.1| aspartyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214030153|gb|EEB70988.1| aspartyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 594

 Score =  655 bits (1691), Expect = 0.0,   Method: Composition-based stats.
 Identities = 336/598 (56%), Positives = 428/598 (71%), Gaps = 6/598 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  S VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS  F 
Sbjct: 1   MHAYRSHTCAELNKSHVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R    +N  I TG+IE+  + IE L  +EELPL VFGE+EY
Sbjct: 61  EIEKVRSEWCIRIDGTVKARDESLVNPKIPTGEIEVFIRDIEFLGQSEELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ +  N++ R+ +I S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQNNMLLRSNMIRSIRNRMWDQGFNEYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q D+ +T+  V+ GVFEEF  G  V   + + +I Y DA   YG+DKPDLRNPI 
Sbjct: 241 MSFVTQQDVFDTIAPVIAGVFEEFGKGRKVDAADEWPQISYKDAALWYGSDKPDLRNPIK 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M  V+EHF  S F +F+K+L      E+ AIPA  GG +R FCDRMN++A+ +G PG+ Y
Sbjct: 301 MQVVSEHFAGSGFAIFAKLLEQEGT-EIRAIPAPTGG-SRKFCDRMNKFAQGEGLPGMGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IFWR    G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F + A  ARN
Sbjct: 359 IFWREGADG-MEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKSFEAVAGRARN 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I +ELG+I+ + F F WI+DFP YE +EE  KIDF HNPF+MPQGGM++L   D L++K
Sbjct: 418 VIGEELGLIDKDRFAFAWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALLA-DPLAVK 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            +QYDL CNG+E+ SG IRNH  E+M +AF   G  KE VE RFGG+  AFQ G PPHGG
Sbjct: 477 GYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            AAGIDR+VMLL    N+REV +FPM+Q   DL+M +PS    +QL ELGLR++   +
Sbjct: 537 CAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMSAPSEPMNDQLMELGLRVIPQDQ 594


>gi|254464021|ref|ZP_05077432.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206684929|gb|EDZ45411.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 594

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 331/598 (55%), Positives = 429/598 (71%), Gaps = 6/598 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  S+VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS  F 
Sbjct: 1   MHAYRSHTCAELNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R    +N  I TG+IE+  + IE+L  +EELPL VFG++EY
Sbjct: 61  EIEKVRSEWCIRIDGEVKARDESLVNPKIPTGEIEVFIRDIEVLGKSEELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N+V R+ +I S+R RM    F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQRNMVLRSNMIRSIRNRMWDIGFNEYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPADFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN--TVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q D+ +T+  V+ GVFEEF  G     +N + +I Y D+   YGTDKPDLRNPI 
Sbjct: 241 MSFVTQQDVFDTIAPVMAGVFEEFGGGRKVDPANEWPQISYKDSALWYGTDKPDLRNPIK 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M  V++HF  S F +F+K+L  +   E+ AIPA  GG +R FCDRMN +A+ +G PG+ Y
Sbjct: 301 MQVVSDHFRGSGFAIFAKLLEQDGT-EIRAIPAPTGG-SRKFCDRMNAFAQKEGLPGMGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IFWR    G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  AR 
Sbjct: 359 IFWRDGAEG-MEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKTFEGVAGKART 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I +ELG+I+ + F F WI+DFP YE +EE  +IDF HNPF+MPQGGM++L  +D L++K
Sbjct: 418 VIGEELGLIDKDRFAFAWIVDFPIYEKDEETGRIDFEHNPFSMPQGGMDALL-SDPLAVK 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            +QYDL CNG+E+ SG IRNH  E+M +AF   G  ++ V+ RFGG+  AFQ G PPHGG
Sbjct: 477 GYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVKKRFGGMVNAFQYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            AAGIDR+VMLL    N+REV +FPM+Q   DL+M +PS    EQL ELGLR++   +
Sbjct: 537 CAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMAAPSEPMAEQLMELGLRVIPQDQ 594


>gi|152976820|ref|YP_001376337.1| aspartyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189082085|sp|A7GT84|SYD_BACCN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|152025572|gb|ABS23342.1| aspartyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 589

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 232/593 (39%), Positives = 342/593 (57%), Gaps = 9/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  +G  V+L GWV + R  GG+IF+D+RD  GI QVV +P+      E+A
Sbjct: 4   RTHACGRVTVEAIGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFSPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++R E+VL ++G V++R A  IN N+ TGQIE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRGEYVLHVEGTVVARGAGAINENMATGQIEVQATKVTVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMYNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++IL+ ME ++  V ++       S  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQEEILDMMERMMTKVMKDVKGVEI-SVPFPRMTYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTGAVENGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK  N      I   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFNEEEANVIMTTLEASAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ N F F W+ D+P  E++EE  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDENKFNFLWVTDWPLLEYDEEANRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G ++E    +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFTQEEAREQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTDAPSPVAGAQLEELHLKLNVKE 589


>gi|126732724|ref|ZP_01748520.1| aspartyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126706854|gb|EBA05924.1| aspartyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 593

 Score =  655 bits (1689), Expect = 0.0,   Method: Composition-based stats.
 Identities = 334/597 (55%), Positives = 431/597 (72%), Gaps = 6/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL   +VG  VRLSGWVHR+R HGGI+F+D+RDH+G TQV+ +PDS  F+
Sbjct: 1   MHAYRSHTCADLTKDNVGETVRLSGWVHRIRDHGGILFIDLRDHFGTTQVLCDPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R  E +N  + TG+IE+  +++E+L  A+ELPL VFGE+EY
Sbjct: 61  DVEKVRSEWCIRIDGNVKARDPELVNPKLPTGEIEVFVRELEVLGQAQELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYR+LDLRR+ + +N+  R+ ++ SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLKYRYLDLRRENMQRNMTLRSDVVASMRRRMWDKGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN--TVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFVEQ D+ +T+  V+ GVFEEF  G        + +I Y +A  +YGTDKPDLRNPI 
Sbjct: 241 MSFVEQQDVFDTISPVIAGVFEEFGGGKSVDAPETWPQIPYKEAALKYGTDKPDLRNPIE 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M +V+EHF  S F +F+K+L  +   E+ AIPA  GG +R FCDRMN WA+ +G PG+ Y
Sbjct: 301 MQDVSEHFRGSGFAIFAKLLEQDGT-EIRAIPAPTGG-SRKFCDRMNAWAQKEGLPGMGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IFWR    G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  AR+
Sbjct: 359 IFWRDQGDG-MEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPASFQKVAGRARD 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + Q+L +I+ N F F WI+DFP YE +EE  +IDF HNPF+MPQGGME+L+G D +++K
Sbjct: 418 VLGQDLKLIDENRFAFAWIVDFPIYEKDEETGEIDFEHNPFSMPQGGMEALQG-DPMAVK 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            +QYDL CNG+E+ SG IRNH  EVML+AF   G   + V+ RFG L+ AF  G PPHGG
Sbjct: 477 GYQYDLACNGYELVSGAIRNHKPEVMLKAFELAGYGADEVKARFGALFNAFHYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            AAGIDRIVMLL G  N+REV +FPM+Q   DL+M +PS  S +QL ELGLRI+   
Sbjct: 537 CAAGIDRIVMLLAGTSNIREVIMFPMNQRAEDLMMNAPSDPSSDQLMELGLRIMPRE 593


>gi|58040178|ref|YP_192142.1| aspartyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|62287513|sp|Q5FQ60|SYD_GLUOX RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|58002592|gb|AAW61486.1| Aspartyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 598

 Score =  655 bits (1689), Expect = 0.0,   Method: Composition-based stats.
 Identities = 312/600 (52%), Positives = 402/600 (67%), Gaps = 11/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH C  L   + G  VRLSGWVH  R HGG++F+D+RDHYG+TQ+V    +   E
Sbjct: 1   MHPYRTHDCSALREENAGQVVRLSGWVHSKRDHGGLLFIDLRDHYGVTQIVIPAGTDLLE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R E V+ + G V+ R     N N+ TG +E+ A  +E+ S AE LP  V G   Y
Sbjct: 61  KAERLRVESVITVTGKVVVRHGSQRNPNLPTGDVEVLADALEVRSSAEVLPFQVAGNENY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYR++DLRRD +H+NI+ R+++I S+R RMI + F E  TPILTASSPEGARDF
Sbjct: 121 PEDLRLKYRYIDLRRDKMHQNIMLRSKVITSLRQRMIEQGFTEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPARLHPGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEASRADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+D+   +E VL GVF EF+          F RI Y DA+R YG+DKPDLRNP+I
Sbjct: 241 MSFVTQEDVFTVLEPVLAGVFNEFTPEGWKITDGAFPRIPYADAMRDYGSDKPDLRNPLI 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLA 357
           + +VT+ F  S F +F+KI +        AIPA G G   R F D++N WAR  G  GL 
Sbjct: 301 IKDVTDAFRDSGFGLFAKIAASGGQIR--AIPAPGAGDRPRGFFDKLNSWARENGAGGLG 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI +     G   G GP+ K+L     E+IR    ++ GD+ FF AG   +   F+   R
Sbjct: 359 YIIF-----GEEGGKGPIVKNLEADRVESIREICGLKAGDAVFFAAGKGDEVAKFSGVVR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A EL +I  N F FCW++DFP YE NEE  K+DF+HNPF+MPQGG+E+L   D L+I
Sbjct: 414 TKVATELDLIEKNAFRFCWVVDFPMYELNEETGKVDFSHNPFSMPQGGLEALNTQDPLTI 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+QYD+VCNG E++SG IRNH+ +VML+AF   G   EVVE RFGG+  AF+ G PPHG
Sbjct: 474 NAYQYDIVCNGVELSSGAIRNHLPDVMLRAFEIAGYGPEVVEERFGGMLNAFRYGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPK 596
           G A G+DRIVMLL    N+REV LFP++Q+  DL+M +P+ V   +L+EL L + +  PK
Sbjct: 534 GAAPGVDRIVMLLADEPNIREVILFPLNQSGEDLMMEAPAPVEPARLKELHLALDLPKPK 593


>gi|212703761|ref|ZP_03311889.1| hypothetical protein DESPIG_01809 [Desulfovibrio piger ATCC 29098]
 gi|212672729|gb|EEB33212.1| hypothetical protein DESPIG_01809 [Desulfovibrio piger ATCC 29098]
          Length = 618

 Score =  654 bits (1688), Expect = 0.0,   Method: Composition-based stats.
 Identities = 249/600 (41%), Positives = 359/600 (59%), Gaps = 14/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H+CG L + + G  V L GWV   R HGG+IF+D+RD  G+TQVV +PD   A  E A
Sbjct: 26  RSHTCGQLTLDNDGQTVCLMGWVQYRRDHGGLIFVDLRDREGLTQVVFSPDIAPAAHENA 85

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+VL I G+V  R     N N++TG IE+   + ++L+ ++  P  +    +  E
Sbjct: 86  HILRSEYVLAIKGVVRPRPEGMTNPNLVTGAIEVVVHEWKLLNTSKTPPFAIEERCDAGE 145

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R  +R+LDLRR  +  N+  R ++  ++R ++  + F+E  TP+LT S+PEGARDFLV
Sbjct: 146 NLRLAWRYLDLRRPRMQANLRLRHKVAQAIRRQLDDDGFLEVETPVLTKSTPEGARDFLV 205

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM  GFDRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 206 PSRLNPGQFYALPQSPQLFKQLLMVGGFDRYFQIVRCFRDEDLRADRQP-EFTQVDIEMS 264

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ ++   EN++  VF +    +     F R+ Y++A+RRYG DKPD R  + + ++
Sbjct: 265 FVDEEKVMTMAENLMARVFHDVMGMDI-PRPFPRMKYEEAMRRYGVDKPDTRFGLELVDI 323

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+    S F++F++   V            G    R   D   E+ +  G  GLA+I  +
Sbjct: 324 TDIVRGSGFKLFAQAKLVK-----AMKVPGGEAMTRKEIDAYTEFVKIYGAMGLAWIKIK 378

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E        P+AK L+      IR  LD+Q GD  FF AG+P    +   + R H+  
Sbjct: 379 ENE-----WQSPIAKFLSEEERAGIREALDLQVGDIVFFQAGEPAMVNAALGNLRVHLGN 433

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+I  N F F W+ +FP +E++EEEK+    H+PFT P  G   +  +D     A  Y
Sbjct: 434 QLGLIPENTFNFLWVTEFPLFEYSEEEKRYVACHHPFTSPAPGHLEIMNSDPARALARAY 493

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H +EV    F  +G + E  E +FG L +A + G PPHGG+A G
Sbjct: 494 DMVLNGNEVGGGSIRIHSAEVQRHMFQALGFTPEQAEAQFGFLIQALEHGAPPHGGLAFG 553

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           +DR+VMLL GA ++R+V  FP +Q    L+  +PSTVS  QLRELGLR+ E  K+  K +
Sbjct: 554 LDRLVMLLSGASSIRDVIAFPKTQKATCLMTEAPSTVSARQLRELGLRLRETDKEAAKPA 613


>gi|269837250|ref|YP_003319478.1| aspartyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786513|gb|ACZ38656.1| aspartyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 609

 Score =  654 bits (1688), Expect = 0.0,   Method: Composition-based stats.
 Identities = 258/590 (43%), Positives = 366/590 (62%), Gaps = 4/590 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           R  +CG+L   DVG  V L GWV+R R HGG+IFLD+RD YGITQVVANP+      + A
Sbjct: 15  RYTTCGELRAGDVGRTVTLKGWVNRRRDHGGLIFLDLRDRYGITQVVANPEHSHEAHQTA 74

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VR+E+VL I G V +R A T N N+ TG IE+ A +IE+L+ A+  P  +  + E  E
Sbjct: 75  ETVRNEYVLSITGTVAARPAGTENPNMATGAIEVVADRIEVLNPAKTPPFYINEDVEVEE 134

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R ++R+LDLR+  + +N++ R R +  +R  + A +FIE  TP+L  S+PEGARD++V
Sbjct: 135 TLRLEFRYLDLRKPRMQRNLMLRHRAVKFIRDYLDARDFIEIETPVLVKSTPEGARDYVV 194

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQQ KQLLM +G DRY+QIA CFRDED R+DR P EF QLD+EMS
Sbjct: 195 PSRIYPGHFYALPQSPQQLKQLLMVAGMDRYYQIARCFRDEDQRADRQP-EFTQLDLEMS 253

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +D+L   E +   +FEE +    +   F R+ Y +AI RYGTDKPDLR  + + +V
Sbjct: 254 FVDVEDVLTLTEGLFTAMFEELATKPILQKPFPRLTYAEAILRYGTDKPDLRFGMEIADV 313

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+    SEF VFS            A+P + G  +R   D++ E A+S G  GL +I   
Sbjct: 314 TDLVADSEFGVFSNTARSGGVIRGIAVPGQAG-ISRGQIDQLTEQAQSFGAKGLVWIGLL 372

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             +  ++    P+AK L+      +  RL    GD    +A       +     R  +  
Sbjct: 373 ASDDRSLTPRSPIAKFLSEDEIRGMAERLGAGPGDLMLLVADQAPVAANVLGRLRVALGH 432

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG++N +   FCWI++ PF+EW+EE  + + AH+PFT P      +   D    +A  Y
Sbjct: 433 QLGLVNTDVHAFCWIVEMPFFEWDEENGRWEAAHHPFTSPMDEDLEILETDPGRARAKAY 492

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V +G+E+ SG IR H  +V  + F  +G  +E +E RFG L RAF+ G PPHGGIA G
Sbjct: 493 DIVLDGWELGSGSIRIHRRDVQNKIFELMGYDEEEIERRFGHLLRAFEYGAPPHGGIAPG 552

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IDR VM+L G +N+REV  FP +Q+  DL+MG+PS ++ EQL+EL + +V
Sbjct: 553 IDRTVMILAGEENIREVIAFPKNQSAQDLMMGAPSPINEEQLKELHINVV 602


>gi|182678379|ref|YP_001832525.1| aspartyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|238691242|sp|B2IKA4|SYD_BEII9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|182634262|gb|ACB95036.1| aspartyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 597

 Score =  654 bits (1688), Expect = 0.0,   Method: Composition-based stats.
 Identities = 340/598 (56%), Positives = 432/598 (72%), Gaps = 3/598 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CGDL  +      RLSGW HR+R HGG++F+D+RDHYGITQ V +PDS  F 
Sbjct: 1   MHRYRTHTCGDLREAQADETTRLSGWCHRIRDHGGVLFIDLRDHYGITQCVVDPDSKAFP 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSEWV+ IDGLV  R + T N  + TG IE+   +IE+L  A ELP+PVFG+ +Y
Sbjct: 61  LAEKLRSEWVVRIDGLVRKRPSGTENPEMPTGFIEIYVTEIEVLGAAAELPMPVFGDIDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+ LHKNI+ R ++I+S+R RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLKYRFLDLRREKLHKNIMLRGQVIDSLRRRMKEQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHAGKFYALPQAPQQYKQLLMMAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+ Q+D+   ME V+RG FEEF NG  V+  F RI Y +A+ +YG+DKPDLRNP+++ 
Sbjct: 241 MSFITQEDVFAAMEPVIRGAFEEFGNGQPVTQTFPRIPYAEAMLKYGSDKPDLRNPLVIA 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           +VT+ F   +    +    +  G  V AIPA G     R+F D++N+WA+S+G  GL Y+
Sbjct: 301 DVTDLFARDDVSFNAFKNVIKKGGVVRAIPATGAASQPRSFFDKLNDWAKSEGAAGLGYV 360

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +   +   V   GP+AK L      AI  R D++ GD+ FF      K    A  AR  
Sbjct: 361 IFEGSDEAPVG-KGPIAKFLPAEVQAAIVTRADLKAGDAVFFACDIEEKAAKLAGAARLR 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           I  ELG+     FE CWI+DFP YEWNE++K +DF+HNPF+MPQGG+E+L+  D L+IKA
Sbjct: 420 IGHELGLSKTGVFELCWIVDFPMYEWNEDDKTVDFSHNPFSMPQGGLEALQTQDPLTIKA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           FQYD+ CNG+EIASGGIRNH  E M++AF   G  +E V  RFGG+YRAFQ G PPHGG+
Sbjct: 480 FQYDIACNGYEIASGGIRNHRPEAMVKAFEIAGYGEETVVERFGGMYRAFQYGAPPHGGM 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPK 596
           AAG+DRI+MLL G +N+RE+SLFPM+Q   DLLMG+PS  + +QLREL +R+ +  PK
Sbjct: 540 AAGVDRIIMLLAGVQNLREISLFPMNQKAEDLLMGAPSEATTKQLRELHIRLNLPEPK 597


>gi|170746938|ref|YP_001753198.1| aspartyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170653460|gb|ACB22515.1| aspartyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 625

 Score =  654 bits (1688), Expect = 0.0,   Method: Composition-based stats.
 Identities = 333/617 (53%), Positives = 425/617 (68%), Gaps = 22/617 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  SDVG  VRLSGW HR+R HGG++F+D+RDHYG+TQ V + DS  F+
Sbjct: 12  MHRYRSHTCGALRPSDVGQSVRLSGWCHRIRDHGGVLFVDLRDHYGLTQCVIDSDSPAFK 71

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VRSEWV+ IDG V +R A T NA + TG +E+    +E+L  A ELPLPVFG+ EY
Sbjct: 72  AAETVRSEWVVRIDGRVRTRPAGTENAELPTGAVEVYIDDLEVLGPAGELPLPVFGDLEY 131

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YRFLDLRR+ LH NI+KR  II+S+R RM    F E  TPILTASSPEGARD+
Sbjct: 132 PEETRLRYRFLDLRREKLHANIMKRGAIIDSLRRRMREGGFFEFQTPILTASSPEGARDY 191

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 192 LVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 251

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   +E VLRGVFEEF+ G  V+  F RI Y D++ +YG DKPDLRNP+I+ 
Sbjct: 252 MSFVTQEDVFQAVEPVLRGVFEEFAEGKRVTKEFPRITYADSMLKYGVDKPDLRNPLIIA 311

Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           +VT+ F   +  F+ F  +++        AIPA G    +R+F D++N+WARS+G PGL 
Sbjct: 312 DVTDLFAREDVAFKAFKGVIASGGVVR--AIPATGAAAQSRSFFDKLNDWARSEGAPGLG 369

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+ +  +E+G + G GP+AK +       I  R   + GD+ FF AG   K    A  AR
Sbjct: 370 YVVF-EEENGQLTGKGPIAKFIPAEVQALIAERAGAKAGDAVFFSAGAEGKAAGLAGKAR 428

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS- 476
             I  ELG+ + + + FCWI DFP YEW+EEEK+IDF+HNPF+MP    E+    DL + 
Sbjct: 429 IRIGDELGLCDKDQYAFCWITDFPMYEWSEEEKRIDFSHNPFSMPNIDREAFLALDLDAL 488

Query: 477 ---------------IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
                          IKAFQYD+VCNG E++SG IRNH  +VM +AF+  G   EV+E +
Sbjct: 489 SSEDENGANTKRILDIKAFQYDIVCNGVELSSGAIRNHRPDVMEKAFAIAGYGHEVLEQK 548

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
           FGG+  A + G PPHGGIA G+DRIVMLL    N+REV LFPM+Q   DL+MG+PS  + 
Sbjct: 549 FGGMLNALRMGAPPHGGIAPGVDRIVMLLCNEPNIREVVLFPMNQRAEDLMMGAPSEATP 608

Query: 582 EQLRELGLRIVENPKKI 598
           +QLREL +R+    KK 
Sbjct: 609 KQLRELHIRLNLPEKKA 625


>gi|126739917|ref|ZP_01755608.1| aspartyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126719149|gb|EBA15860.1| aspartyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 617

 Score =  654 bits (1686), Expect = 0.0,   Method: Composition-based stats.
 Identities = 335/620 (54%), Positives = 434/620 (70%), Gaps = 27/620 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  S+VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS  F 
Sbjct: 1   MHAYRSHTCAELNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + I+G V++R    +N  I TG++E+  + +E+L  AEELPL VFGE+EY
Sbjct: 61  ELEKVRSEWCIKIEGNVLARDESLVNNAIPTGEVEVFIRDLEVLGKAEELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N+V R  +I S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQRNMVLRANMIQSIRKRMWDKGFNEYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T++ V++GVFEEF  G  V + + +I Y DA + YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQQDVFDTIQPVMQGVFEEFGKGRKVDSEWPQISYKDAAKWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           + +EHF  S F +F+ +L      EV AIPA  GG +R FCDRMN++A+ +G PG+ YIF
Sbjct: 301 DCSEHFRGSGFAIFASLLENEGT-EVRAIPAPTGG-SRKFCDRMNKFAQGEGLPGMGYIF 358

Query: 361 WRLDESGNV------------------------AGMGPVAKHLNIVNTEAIRVRLDMQDG 396
           WR   + ++                           GPVAK++    TEAIR +L +  G
Sbjct: 359 WRKQSADSIAQERGISVKEVNALIKSGEITLGDEAAGPVAKNIGPERTEAIRQQLGLDVG 418

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+ FF+ G P  F S A  AR  I +ELG+++ + F FCWI+DFP YE +EE  KIDF H
Sbjct: 419 DAVFFLGGKPKAFESVAGRARTVIGEELGLVDKDRFAFCWIVDFPIYEKDEETGKIDFEH 478

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           NPF+MPQGGM++L   D L++K +QYDL CNG+E+ SG IRNH  E+M +AF   G  KE
Sbjct: 479 NPFSMPQGGMDALL-TDPLAVKGYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKE 537

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
            VE RFGG+  AFQ G PPHGG AAGIDR+VMLL    N+REV +FPM+Q   DL+M +P
Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMSAP 597

Query: 577 STVSVEQLRELGLRIVENPK 596
           S    EQL ELGLR++   +
Sbjct: 598 SEPMSEQLMELGLRVIPQDQ 617


>gi|254492251|ref|ZP_05105425.1| aspartyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224462576|gb|EEF78851.1| aspartyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 595

 Score =  654 bits (1686), Expect = 0.0,   Method: Composition-based stats.
 Identities = 227/597 (38%), Positives = 354/597 (59%), Gaps = 4/597 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           R+H CG++  +  G  V + GW+HR R HGG+IF+D+RD  G+ QVV NP D+  F  A+
Sbjct: 2   RSHYCGEVNETLEGKSVTVVGWMHRRRDHGGVIFIDLRDRDGLVQVVCNPEDAESFTTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL I+G V  R A + N ++ +G+IE+ A+K+EIL+ AE  P P+    +  E 
Sbjct: 62  RVRSEYVLKIEGNVQLRPAGSDNPDLKSGKIEIIAKKLEILNSAETPPFPLNELLDVSED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR ++R++DLRR  + + +  R++I   +R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 IRLRHRYIDLRRPEMQQRLRFRSQITRQLRNYLDDHGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM SGFDRY+Q+  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHPGEFFALPQSPQLFKQLLMMSGFDRYYQVVRCFRDEDLRADRQP-EFTQVDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++++ ++ ME ++R +F        + N F R+ Y +A +RYG+DKPDLR P+ + +V+
Sbjct: 241 VDEEEFMSLMEEMIRSLFANVLEQ-PLPNPFPRMTYAEAQQRYGSDKPDLRIPLELVDVS 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G   +R   D   ++    G  GLAYI    
Sbjct: 300 DLMQAVDFKVFSGPANDERGRVAALRVPGGNSLSRKEIDDYTKYVGIYGAKGLAYIKVND 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K L     EAI  R+  + GD  FF A             R  + Q+
Sbjct: 360 LAAGRDGLQSPILKFLPDDVVEAIMQRVGAETGDLVFFGADKTSVVNESLGALRVKVGQD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++  + +   W+++FP +EW+++ ++    H+PFT P+     L   D     +  YD
Sbjct: 420 LDMV-EHGWRPLWVVEFPMFEWDDKSERWHALHHPFTAPRESDVGLLETDPEKCLSRAYD 478

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H +E+  +    +GI +E  +++FG L  A + G PPHGG+A G+
Sbjct: 479 MVLNGTELGGGSIRIHQTEIQKKVLELLGIGEEEAQDKFGFLLEALKYGCPPHGGLAFGL 538

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+VML+ G+ ++R+V  FP +Q+   LL  +PS ++ +QL+EL +R+ + P    +
Sbjct: 539 DRLVMLMTGSASIRDVMAFPKTQSASCLLTDAPSAIADQQLKELNIRLRKLPNAEAQ 595


>gi|209964841|ref|YP_002297756.1| aspartyl-tRNA synthetase AspS [Rhodospirillum centenum SW]
 gi|238064672|sp|B6IN46|SYD_RHOCS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|209958307|gb|ACI98943.1| aspartyl-tRNA synthetase AspS [Rhodospirillum centenum SW]
          Length = 601

 Score =  654 bits (1686), Expect = 0.0,   Method: Composition-based stats.
 Identities = 303/604 (50%), Positives = 410/604 (67%), Gaps = 14/604 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L   + G  VRLSGW+HR R HG ++F+D+RDHYG+TQ V +  +  F 
Sbjct: 1   MHAYRTHTCGQLREQNAGETVRLSGWIHRKRDHGNLLFIDLRDHYGLTQCVIDTSNPNFG 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R E V+ + G V++R+ ET+N  + TG+IE+  +++E+ S A+++PL V  E++ 
Sbjct: 61  TVEGLRVESVITVTGKVVARTTETVNDKLPTGRIEVQVKELEVQSAADQVPLQVNSEQDA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YRFLDLRR+ + +N+V R+ +I S+R RMI + F E  TPILTASSPEGARDF
Sbjct: 121 GEELRLRYRFLDLRREKMQRNMVLRSNVIASVRRRMIEQGFTEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R + G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 181 LVPARNHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN-----TVSNNFLRICYDDAIRRYGTDKPDLRN 295
           MSFV QDD+   +E V+ G+FEEFS             F+RI +D+A+ +YG+DKPDLRN
Sbjct: 241 MSFVTQDDVFAAIEPVIHGIFEEFSGFTGVKKSVSPYPFVRIPFDEAMLKYGSDKPDLRN 300

Query: 296 PIIMHNVTEHFV--HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
           P+++ +VT+ F     EF+ F  ++          +P       R+F D++N+WAR  G 
Sbjct: 301 PLVIVDVTDVFRRPDVEFKAFKGVIEKGGVVRTIRVPGVADR-PRSFYDKLNDWARGLGA 359

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
           PGL YI +           GP+AK +      A+R      DGD+ FF+   P      A
Sbjct: 360 PGLGYIVFEGGAGK-----GPIAKFVPEAAQAALRQATGAVDGDAVFFVCDQPGPAAKLA 414

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
             AR  IA +L +I  + FEFCWI+DFP YE++EE KKIDF+HNPF+MPQGG+E+L+  D
Sbjct: 415 GQARTEIATQLDLIAKDRFEFCWIVDFPMYEYDEERKKIDFSHNPFSMPQGGLEALETQD 474

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
            L+IKAFQYD+VCNG E++SG IRNH  E+M +AF   G + E +E +FGG+  AF+ G 
Sbjct: 475 PLTIKAFQYDIVCNGVELSSGAIRNHRPEIMYKAFEIAGYAAEDLEAKFGGMLSAFKLGA 534

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-V 592
           PPHGG A GIDR+VMLL    N+REV LFP++Q   DLLM +P+ V+ E+L+EL L++ +
Sbjct: 535 PPHGGSAPGIDRMVMLLADEPNIREVILFPLNQRAEDLLMQAPNGVAPERLKELHLKLDL 594

Query: 593 ENPK 596
             PK
Sbjct: 595 PKPK 598


>gi|239827843|ref|YP_002950467.1| aspartyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511862|sp|C5D509|SYD_GEOSW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|239808136|gb|ACS25201.1| aspartyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 594

 Score =  654 bits (1686), Expect = 0.0,   Method: Composition-based stats.
 Identities = 234/595 (39%), Positives = 351/595 (58%), Gaps = 10/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+ CG++    +G  V L GWV + R  GG+IF+D+RD  GI QVV +P+       +A
Sbjct: 4   RTYYCGEITEKAIGEKVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFSPEVSKEALNVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+VL ++G V++R   TIN N+ TG+IE+ A++I I++ A+  P  +  + +  E
Sbjct: 64  EKVRNEYVLSVEGTVVAREEGTINPNLPTGKIEIQAERITIINEAKTPPFVITDQTDVAE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + + +  R R+  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 EVRLKYRYLDLRRPVMFRTLQLRHRVTKAIRDFLDGEGFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GF+RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHPGEFYALPQSPQIFKQLLMVAGFERYYQIARCFRDEDLRADRQP-EFTQIDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++I+   E ++  V +  + G  +S  F R+ YD+AI RYG+DKPD R  + + +V
Sbjct: 243 FMSQEEIMQLTERMMAYVMK-MAKGIDISLPFPRMSYDEAISRYGSDKPDTRFGLELVDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E   +S F+VF+  ++     +   +       +R   D + E+    G  GLA++   
Sbjct: 302 SEIVKNSSFKVFAGAIANGGQVKAINVKGAADQYSRKDIDALAEFVARYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK         +   L+ + GD   F+A       +     R  + +
Sbjct: 362 ED-----GLKGPIAKFFTEEEQNGLIRTLEAEAGDLLLFVADHKTVVANALGALRVKLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +I+   F F WI D+P  E++EE+ +   AH+PFTMP          +   ++A  Y
Sbjct: 417 DLNLIDETKFNFLWITDWPLLEYDEEDGRYYAAHHPFTMPVREDLPQLETNPEKVRAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R    EV  + F  +G ++E    +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSMRIFEREVQEKMFRALGFTEEEARKQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS VS +QL EL L +V + KK
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVSEQQLEELHL-VVNSEKK 590


>gi|147677384|ref|YP_001211599.1| aspartyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|189082107|sp|A5D3E3|SYD_PELTS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146273481|dbj|BAF59230.1| aspartyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 603

 Score =  653 bits (1685), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/602 (39%), Positives = 348/602 (57%), Gaps = 10/602 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            R+H CG+L V   G  V L+GWV R R HGG+IF+D+RD  GI QVV +PD     F  
Sbjct: 9   KRSHYCGELRVEHAGLEVVLTGWVQRRRDHGGLIFIDLRDRTGIVQVVFSPDLHEEAFLK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A++VR+E+VL + G V  R   T N N+ TGQ+E+   ++ IL+ A+  P  +    +  
Sbjct: 69  AEAVRNEYVLAVRGTVRERPEGTANPNLATGQVEVLGCELRILNRAKTPPFYIEDGVDVD 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R +YR+LDLRR  + + ++ R R   S+R  +    F+E  TP+LT S+PEGARD+L
Sbjct: 129 ENLRLRYRYLDLRRPEMQEALIFRHRAAKSVRDFLDEHGFLEIETPMLTRSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ +KQ+LM +G DRYFQIA CFRDED R+DR P EF Q+D+EM
Sbjct: 189 VPSRVNPGRFYALPQSPQLFKQILMVAGMDRYFQIARCFRDEDLRADRQP-EFTQIDIEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+L   E ++  +  E +  +     F R+ Y +A+ R+G+DKPD R  + + +
Sbjct: 248 SFVDVDDVLELTEGMVARLCREVAGLDI-PRPFPRLSYREAMDRFGSDKPDTRFGMELKD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++      F+VF+  ++     +     A  G  +R   D +  +A      GLAY   
Sbjct: 307 ISDIASGCGFKVFASAVAGGGQVKGINA-AGCGSFSRKEIDDLTAFAAVYKAKGLAYFIV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                        ++K        AI  R+D + GD   F+A  P    +     R H+ 
Sbjct: 366 N-----EEGVKSAISKFFTEAELSAILERMDAKPGDLLLFVADKPEVVAASLGALRLHLG 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG+I    + F W++DFP  E+N+EE + +  H+PFT P+     L  +D   ++A  
Sbjct: 421 ERLGLIPEGTYHFLWVVDFPLLEYNQEEGRYEAMHHPFTSPRETDIPLLESDPGRVRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR H  +V  + F+ +GI +E    +FG L  AF+ G PPHGGIA 
Sbjct: 481 YDLVLNGTEVGGGSIRIHRRDVQEKVFTAIGIDREEASEKFGFLLEAFEYGTPPHGGIAL 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKI 601
           G DR+VMLL G   +R+V  FP +Q+  DL+  +P  V+ EQLREL +R V   ++  ++
Sbjct: 541 GFDRLVMLLAGKNTIRDVIAFPKTQSATDLMTMAPGPVAEEQLRELHIRTVLKIRERERL 600

Query: 602 SV 603
           + 
Sbjct: 601 TA 602


>gi|241761263|ref|ZP_04759351.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241374170|gb|EER63667.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 596

 Score =  653 bits (1685), Expect = 0.0,   Method: Composition-based stats.
 Identities = 319/598 (53%), Positives = 417/598 (69%), Gaps = 7/598 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C  L  ++VG  VRLSGWVHR R HGG++F+D+RDHYG+TQ+VA+ DSA FE
Sbjct: 1   MHAYRTHNCSALRRANVGEKVRLSGWVHRKRDHGGLLFVDLRDHYGLTQIVADSDSAVFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +R E V+ + G V+ R+ E +N N+ TG+IE+ A ++++ S A+ELPLPV GE +Y
Sbjct: 61  KLDQLRLESVITVTGEVVERAPEVVNPNLATGEIEIRASEVDVQSFAQELPLPVAGEADY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YR+LDLRRD LH+NIV R+ +I S+R RMI + F E  TPILTASSPEGARD+
Sbjct: 121 PEDIRLRYRYLDLRRDRLHRNIVLRSNVIASLRRRMIEQGFNEYQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQ +KQL+M +GFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 181 LVPSRVHPGKFYALPQAPQMFKQLMMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT-VSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+  T+E VL GVFEEF  G T     F RI Y DA+  YG+DKPDLRNP+ +
Sbjct: 241 MSFVTQEDVFATIEPVLAGVFEEFGGGKTVTPAPFPRIAYRDAMLYYGSDKPDLRNPLKI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTEHF  S F +F+ +++          P  G   +R F D MN WAR +G  GL YI
Sbjct: 301 SDVTEHFRDSGFGLFAGMVAKGGVVRAIPAPEAGKN-SRKFFDDMNNWAREEGFAGLGYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +  E+G     GP+A++L    T+ +   L + + D  FF AG   +    A  ARN 
Sbjct: 360 NIKNGEAG-----GPIARNLGEEATQKLLADLGLGENDGVFFAAGKEGEAARLAGLARNR 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + + L +I  + F FCW++DFP +E++EE K++ F+HNPF+MPQGGME+L+  D L I A
Sbjct: 415 VGELLDLIEKDSFRFCWVVDFPMFEYDEEAKQVIFSHNPFSMPQGGMEALETKDPLDILA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+M +AF   G  + +V+  F G+  AF+ G PPHGG 
Sbjct: 475 YQYDIVCNGIELSSGAIRNHRPEIMYKAFEIAGYDQAMVDENFAGMINAFKYGAPPHGGA 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VMLL G  N+REV LFPM+Q   DL+MG+P+ VS  QL+EL LRI   P +
Sbjct: 535 APGVDRMVMLLAGEPNIREVVLFPMNQKAEDLMMGAPAAVSERQLKELSLRIAVKPTQ 592


>gi|114330631|ref|YP_746853.1| aspartyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122314381|sp|Q0AIE4|SYD_NITEC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|114307645|gb|ABI58888.1| aspartyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 593

 Score =  653 bits (1685), Expect = 0.0,   Method: Composition-based stats.
 Identities = 244/590 (41%), Positives = 342/590 (57%), Gaps = 5/590 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  + L GWVHR R HGG+IF+D+RD  GI Q+V +PD+ A F IA+
Sbjct: 2   RTDYCGAINTRHLGRTITLCGWVHRRRDHGGVIFIDLRDREGIVQIVCDPDNVAAFPIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+VL I GLV  R   T+N  I +G+IE+    IEIL+ +   P  +  +    E+
Sbjct: 62  KIRNEFVLEITGLVRHRPEGTVNRGIPSGEIEVLVSTIEILNPSLTPPFQMDDDNLS-EA 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR +YR+LDLRR  +  NI  R ++  + R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 IRLEYRYLDLRRPAMQHNIRLRHKVTMATRVFLDQHGFIDVETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVNVGCFFALPQSPQLFKQLLMVSGFDRYYQITRCFRDEDLRADRQP-EFTQIDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++DI++ ME+++R +F +  N  ++ + F RI Y DA+ RYG+DKPDLR P+ +  +T
Sbjct: 240 LQENDIMDLMEDMIRRLFADVINV-SLPDPFPRISYADAMFRYGSDKPDLRVPLELTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +      F+VF        G         GG  +R   D    +    G  GLAYI    
Sbjct: 299 DLMQDVPFQVFRDAAQKPGGRVAALRVPGGGELSRKEIDEYTRFVGIYGAKGLAYIKIND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K L     +++  R   Q+GD  FF A             R  I  E
Sbjct: 359 LTKGMEGLQSPILKFLPEPVVQSMLERTQAQNGDLVFFGADKVKTVNDALGALRVKIGHE 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G+   N ++  W++DFP +EW+EEEK+    H+PFT P  G E     D     +  YD
Sbjct: 419 RGLAT-NLWQPLWVVDFPMFEWDEEEKRWQALHHPFTAPSQGHEDFLATDPGKALSRAYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR H  +V  + F  + I+ +  + +FG L  A Q G PPHGGIA G+
Sbjct: 478 MVLNGMEIGGGSIRIHRQDVQSKVFQALNIADDEAKLKFGFLLDALQYGAPPHGGIAFGL 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           DRIV ++ G  ++R+V  FP +Q    LL  +PSTV  +QLREL +R+ +
Sbjct: 538 DRIVAMMTGTDSIRDVIAFPKTQRAQCLLTQAPSTVEEKQLRELHIRLRK 587


>gi|307946773|ref|ZP_07662108.1| aspartyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307770437|gb|EFO29663.1| aspartyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 603

 Score =  653 bits (1685), Expect = 0.0,   Method: Composition-based stats.
 Identities = 339/591 (57%), Positives = 434/591 (73%), Gaps = 3/591 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+HSCGDL    VG  +RLSGWVHRVR HGG++F+D+RDHYG+TQ V +PDS  F 
Sbjct: 10  MHLYRSHSCGDLRADHVGETIRLSGWVHRVRDHGGVLFIDLRDHYGMTQCVVDPDSDAFG 69

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VRSEW + IDG V  R+ ETIN+ + TG+IE+  +++E+L  A+ELPLPVFGE +Y
Sbjct: 70  LAETVRSEWCIRIDGTVKKRTEETINSELPTGEIEVFIREMEVLGAAQELPLPVFGELDY 129

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYR+LDLRR+ LH NIV R+ ++  +R RM    F E  TPI+TASSPEGARDF
Sbjct: 130 PEEVRLKYRYLDLRREKLHNNIVLRSDVVKDLRERMWNLGFNEFQTPIITASSPEGARDF 189

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 190 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 249

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q +I +T+E V+ G FE F  G  V+ N+ +I Y DA   YG+DKPDLRNP+ M 
Sbjct: 250 MSFVTQQEIFDTIEPVIAGCFERFGKGRPVNRNWPQISYKDAALWYGSDKPDLRNPLKMQ 309

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+ +L   PG E+ AIPA  GG +R FCDRMN++A+ +G PG+ YIF
Sbjct: 310 IVSEHFKGSGFAIFANLLE-QPGTEIRAIPAPKGG-SRKFCDRMNKFAQGEGLPGMGYIF 367

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G++   GP+AK++    TEAIR +L ++ GD+ FF+ G P +F + A  ARN I
Sbjct: 368 WRKAEDGSMEAAGPLAKNIGPERTEAIRQQLGLEVGDAAFFLGGKPKQFEAVAGKARNII 427

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG  + + FEF WI+DFP YE +EE  +IDF HNPF+MPQGGME+L  +D L +  +
Sbjct: 428 GEELGHTDKDRFEFAWIVDFPIYERDEETGEIDFEHNPFSMPQGGMEAL-ESDPLEVLGY 486

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG E+ SG IRNH  E+M +AF   G  KE V+ RFGG+  AFQ G PPHGG A
Sbjct: 487 QYDLTCNGNELVSGAIRNHKPEIMYKAFEIAGYPKEEVDKRFGGMVTAFQYGAPPHGGCA 546

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           AGIDR+VMLL     +REV +FPM+Q   DL+MG+PS  +  QLR+L LR+
Sbjct: 547 AGIDRMVMLLADESTIREVVMFPMNQKAEDLMMGAPSEATPAQLRDLHLRL 597


>gi|253997486|ref|YP_003049550.1| aspartyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253984165|gb|ACT49023.1| aspartyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 595

 Score =  653 bits (1685), Expect = 0.0,   Method: Composition-based stats.
 Identities = 226/592 (38%), Positives = 356/592 (60%), Gaps = 5/592 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RTH CG L    +G  V L GW HR R HGG+IF+D+RD  G+ Q+V +PD+   FE+A+
Sbjct: 3   RTHYCGHLNREHIGQTVTLCGWAHRRRDHGGVIFIDLRDREGLAQIVIDPDTKGAFEVAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +VRSE+VL +   V +R   T+N N+ TG++E+ A +IE+L+ +   P  +  E    E+
Sbjct: 63  TVRSEFVLKVVCKVRARPEGTVNPNLPTGEVEMLATEIEVLNASLTPPFMLDDENLT-ET 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R ++R++DLRR  + KN++ R R+  ++R  +    FIE  TP+LT S+PEGARD+LVP
Sbjct: 122 VRLEHRYIDLRRPAMQKNMMLRYRVAKTLRDYLDVNGFIEVETPMLTRSTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRVHHGQFFALPQSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQP-EFTQVDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +E++DI++ +E ++R + +   N +  +  F R+ + +A+ RYG+DKPD+R  + +  ++
Sbjct: 241 MEENDIMDLVEEMIRQMLKNVQNVDLPAK-FPRMPFAEAMNRYGSDKPDMRVTLEITELS 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR- 362
           +     +F+VF+   ++  G         G   +R+  D   E+ +  G  GLAYI    
Sbjct: 300 DVMKDVDFKVFAGAANMAGGRVAALRVPNGAAISRSEIDAYTEFVKIYGAKGLAYIKIND 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + +        P+ K++++   +A+  R   Q+GD  FF A             R  +  
Sbjct: 360 ITKLNEEGLQSPIVKNIHVAALQAVIERTGAQNGDIVFFGADKAKVVNEALGALRLKVGH 419

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           + G ++   +   W++DFP +E +EE  +    H+PFT P+ G E L  ++  +  +  Y
Sbjct: 420 DKGHVDGRAWAPLWVVDFPMFEHDEENDRWVALHHPFTAPKDGHEDLLVSNPGACLSKAY 479

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  +V  + F  + IS+E  + +FG L  A Q G PPHGG+A G
Sbjct: 480 DMVLNGWEVGGGSVRIHKQDVQSKVFDALKISREEAQEKFGFLLDALQYGAPPHGGLAFG 539

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+V L+ GA+++R+V  FP +Q    L+  +P+ V  +QLREL +R+   
Sbjct: 540 LDRLVTLMAGAESIRDVIAFPKTQRAQCLMTNAPNEVDEKQLRELHIRVRSQ 591


>gi|254511105|ref|ZP_05123172.1| aspartyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221534816|gb|EEE37804.1| aspartyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 591

 Score =  653 bits (1684), Expect = 0.0,   Method: Composition-based stats.
 Identities = 327/595 (54%), Positives = 430/595 (72%), Gaps = 4/595 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C  L  ++VG  VRLSGWVHRVR HGG++F+D+RDH+G+TQV+ + DSA F 
Sbjct: 1   MHAYRSHTCAALTAANVGETVRLSGWVHRVRDHGGVLFIDLRDHFGVTQVLCDGDSAAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R  E +N  + TG+IE+  +++E+L  A+ELPL VFG++EY
Sbjct: 61  ELEKVRSEWCIRIDGTVKARDPELVNPKLPTGEIEIYVRELEVLGAADELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N+  R+ +++SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREAMQQNMTLRSDVVSSMRKRMWDQGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ VL GVFEEF  G  V  ++ +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVLTGVFEEFGGGRKVDQDWPQISYKDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F +F+K+L  +   E+ AIPA  GG +R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSDHFRGSGFAIFAKLLEQDGT-EIRAIPAPSGG-SRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  AR+ I
Sbjct: 359 WRDQGQG-MEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKAFEKVAGKARDVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +   + F F WI+DFP YE +EE   IDF HNPF+MPQGGME+L+G D L ++ +
Sbjct: 418 GEELNLTEKDRFAFAWIVDFPIYEQDEETGAIDFEHNPFSMPQGGMEALQG-DPLDVRGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+ML+AF   G  ++ V++RFG L+ AF  G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHKPEIMLKAFELAGYGEDEVKSRFGALFNAFHYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           AGIDRIVMLL    N+REV +FPM+Q   DL+M +PS  + +QL ELGLRI+   
Sbjct: 537 AGIDRIVMLLADEANIREVMMFPMNQRAEDLMMDAPSDPTSDQLMELGLRIIPQE 591


>gi|307295007|ref|ZP_07574849.1| aspartyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306879481|gb|EFN10699.1| aspartyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 594

 Score =  653 bits (1684), Expect = 0.0,   Method: Composition-based stats.
 Identities = 334/600 (55%), Positives = 436/600 (72%), Gaps = 8/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  ++VG+ VR+SGWVHR R HG ++F+D+RDHYG+ Q+V   D   F 
Sbjct: 1   MHAYRTHNCGALTTAEVGNEVRVSGWVHRKRDHGDLVFIDLRDHYGMVQIVTEVDGPVFR 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + +S+R+E V+ + G V++R+ E +N N+ TG+IE+ A    +LS A +LPLPV GE+EY
Sbjct: 61  VIESLRAESVVTVTGKVVARAKEAVNPNLPTGEIEIRALDAVVLSAAADLPLPVAGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YRFLDLRR+TLH NIVKRT+II+ MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLRYRFLDLRRETLHANIVKRTKIISDMRRRMEGAGFTEYSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT--VSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+D+ NTME V+  VFE+F++G     + +F RI + +A+ +YG+DKPDLRNPI+
Sbjct: 241 MSFVTQEDVWNTMEPVIAQVFEQFADGKPVTPAGSFPRIPHAEAMLKYGSDKPDLRNPIL 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +VT+HF  S F +F+ ++           P  G G +R F D MN WAR++G  GL Y
Sbjct: 301 ITDVTDHFHGSGFGIFASLVESGSVIRAIPAPGAGAG-SRKFFDDMNNWARTEGYSGLGY 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +    G     GP+AK+     T  +   L +   D  FF AG   +    A  AR 
Sbjct: 360 INIKDGVPG-----GPIAKNHGEERTAKLIEALGLGLNDGVFFAAGKESQAAKLAGLARI 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++L +I+ + FE CWI+DFPFYE++E+ K IDFAHNPF+MPQGG+++L   D L+I 
Sbjct: 415 RVGEQLDLIDKDRFELCWIVDFPFYEYDEDTKSIDFAHNPFSMPQGGLDALNDQDPLTIN 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG+EIASG IRN   E+M++AF  VG+S++ VE RFGGLYRAFQ G PPHGG
Sbjct: 475 AYQYDMVCNGYEIASGSIRNQSPELMVKAFEKVGLSQQDVEERFGGLYRAFQYGAPPHGG 534

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +AAG+DRIVMLL GA+N+RE++LFPM+Q   DLLMG+PS    +QLREL +R++E   K 
Sbjct: 535 MAAGVDRIVMLLCGAQNLREITLFPMNQRAEDLLMGAPSAAEFKQLRELNIRVMEPQTKA 594


>gi|119384915|ref|YP_915971.1| aspartyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|166225372|sp|A1B431|SYD_PARDP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119374682|gb|ABL70275.1| aspartyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 591

 Score =  653 bits (1684), Expect = 0.0,   Method: Composition-based stats.
 Identities = 329/595 (55%), Positives = 436/595 (73%), Gaps = 4/595 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M  YR+H+CG+L  +  GS +RLSGWVHRVR HGG++F+D+RDHYGITQV+A+ DS  F 
Sbjct: 1   MSAYRSHTCGELTAAAAGSEIRLSGWVHRVRDHGGVLFIDLRDHYGITQVIADSDSLAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R+E V+ IDG V  R    +N  + TG+IE+ A  +E+L  A++LPLPVFG+++Y
Sbjct: 61  ALEKLRAETVIRIDGRVKLRDPSLVNPKLPTGEIEVYATAMEVLGAADDLPLPVFGDQDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R  YRFLDLRR++LH NI+ R+R++  +R  M  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLTYRFLDLRRESLHNNIMLRSRVVKWLRDAMWDQGFTEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M +GFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   ++ V++G+FEEF  G  V  ++ RI Y +A+ +YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVFRAIQPVIQGLFEEFGGGRRVDTDWPRIPYAEAMLKYGSDKPDLRNPIEMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F +F+K+L  +   EV AIPA GGG +R F DRMN +A+ QG PG+ YIF
Sbjct: 301 VVSDHFRGSGFAIFAKLLEQDGT-EVRAIPAPGGG-SRKFADRMNAFAQGQGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G     GP+AK L    TEAIR +L + +GD+ FF+ G P  F + A  ARN I
Sbjct: 359 WRKAEDGTTEAAGPIAKALGPEKTEAIRTQLGLGEGDAAFFLGGKPETFEAVAGRARNEI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ N F+F WI+DFP YE  E+  +IDF+HNPF+MPQGG+++L+G D L++  +
Sbjct: 419 GRELGLIDENQFKFAWIVDFPMYEKGED-GRIDFSHNPFSMPQGGLDALEG-DPLAVMGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G  ++ VE RFGG+ +AF+ G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHRPEIMFRAFELAGYGRDEVEKRFGGMVKAFRYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           AGIDRIVMLL    N+REV +FPM+Q   DL+MG+PS  + EQLREL LR++   
Sbjct: 537 AGIDRIVMLLADEVNIREVIMFPMNQRAEDLMMGAPSEPTNEQLRELRLRVLPRE 591


>gi|291613441|ref|YP_003523598.1| aspartyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291583553|gb|ADE11211.1| aspartyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 598

 Score =  653 bits (1684), Expect = 0.0,   Method: Composition-based stats.
 Identities = 242/600 (40%), Positives = 352/600 (58%), Gaps = 10/600 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG L VS++G  V L GW HR R HGG+IF+D+RD  G+ QVV +PD    F IA+
Sbjct: 2   RTHYCGQLNVSNLGQTVTLCGWAHRRRDHGGVIFIDLRDREGLAQVVCDPDRADMFAIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+VL + G V  R   T N NI +G+IE+   +IE+L+V+   P  +  E    E+
Sbjct: 62  SVRNEFVLKVTGRVRRRPEGTDNKNIPSGEIEILCHEIEVLNVSVTPPFQLDDENLS-EN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R  +R +DLRR  +  N++ R +   + R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTHRVIDLRRPQMQHNMMLRYKTARAFRRFLDDKGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQ+LM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHAGEFFALPQSPQLFKQMLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++ I+  ME ++R VF+E  N   + N F R+ Y +A+ R+G+DKPD+R  + +  VT
Sbjct: 240 LTEEQIMVLMEEMIRTVFKEVLNV-ALPNPFPRMTYAEAMGRFGSDKPDMRVTLEITEVT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR- 362
           +      F+VF+ + + + G        KGG  +R   D   ++    G  GLAYI    
Sbjct: 299 DAVKDVAFKVFAGVANSDNGRVAALRVPKGGAFSRGEIDEYTKFVGIYGAKGLAYIKVND 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + +        P+ K+L+    + I  R   Q+GD  FF A             R+ I  
Sbjct: 359 ITKLNEEGLQSPIVKNLHEAALKTIVERTGAQNGDIIFFGADKAKIVNDALGALRSKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E G  N   +E  W++DFP +E+++E K+ +  H+PFT P+    +L  +D     A  Y
Sbjct: 419 EKGYTNGKAWEPLWVVDFPMFEYDDEAKRWNACHHPFTAPKDEHLALLESDPGKCLAKAY 478

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL  NG EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGG+A G
Sbjct: 479 DLALNGSEIGGGSVRIHKEEVQSKVFRALNIGAEEAQLKFGFLLDALQYGAPPHGGLAFG 538

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-----VENPKK 597
           +DRIV ++ G++++R+V  FP +Q    LL  +PS V  +QLREL +R+     VE PK+
Sbjct: 539 LDRIVTMMTGSESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRLRQPATVETPKE 598


>gi|310643535|ref|YP_003948293.1| aspartyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309248485|gb|ADO58052.1| Aspartyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 592

 Score =  653 bits (1684), Expect = 0.0,   Method: Composition-based stats.
 Identities = 240/595 (40%), Positives = 351/595 (58%), Gaps = 10/595 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
             R+H CG L  + +G  V L+GWV   R  GG++F+D+RD  GI Q+V NP       +
Sbjct: 1   MKRSHQCGALTHAHIGETVTLNGWVQTRRDLGGVLFIDLRDRSGIVQIVFNPAYSGDALQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA  VRSE+VL + G V+ R AETIN+N+ TG+IE+   +IE+L+ ++  P  +    E 
Sbjct: 61  IADRVRSEYVLEVTGTVVKRDAETINSNLPTGEIEVRVTEIEVLNASKTPPFFIEDGVEV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            ES+R KYR+LDLRR  +H+ +  R++     R  +  E+FIE  TPILT SSPEGARD+
Sbjct: 121 DESLRLKYRYLDLRRPEMHQTLKLRSKAAKVFRDFLDGEDFIEVETPILTKSSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++G F+ALPQ+PQ YKQLLM  G +RY+Q+A CFRDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRVHEGEFFALPQSPQLYKQLLMVGGLERYYQVARCFRDEDLRADRQP-EFTQIDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF++QDD+L  ME ++  +F+E      +   F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 240 TSFMQQDDLLPMMERLMVKLFKETVGVE-LETPFQRITHAEAMDKYGSDKPDLRFGLELV 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV +    S  +VF+ ++      +V      G   +R   D +  +A   G  GLA+I 
Sbjct: 299 NVNDIVATSGVKVFASVIEKGGEVKVLNAKGCGT-WSRKDIDDLGPFAARYGAKGLAWIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +  E       GP+ K       EA++ R   ++GD   F A +           R  I
Sbjct: 358 VKEGE-----FKGPIVKFFTPEEIEALKERTGAEEGDLLLFSADNKKVVADVLGALRLKI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + LG+I+   F+F W++DFP   ++EE+K+    H+PFT P+    +L   D   ++A 
Sbjct: 413 GRHLGLIDDKKFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKEEDLALLDTDPGQVRAQ 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R    E+  + F  + +  E V+++FG L  AF+ G PPHGGIA
Sbjct: 473 AYDIVLNGYEVGGGSMRIFKREIQEKMFKALNLPPEEVKDKFGYLLDAFEYGTPPHGGIA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G DR+VMLL G  N+RE   FP + +  DLLM +P+ V   QL +L +R+   P
Sbjct: 533 FGFDRLVMLLAGRTNLRETIAFPKTASATDLLMDAPAEVDQAQLDQLHIRLAPKP 587


>gi|254421112|ref|ZP_05034836.1| aspartyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196187289|gb|EDX82265.1| aspartyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 610

 Score =  653 bits (1684), Expect = 0.0,   Method: Composition-based stats.
 Identities = 335/614 (54%), Positives = 433/614 (70%), Gaps = 23/614 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CG L  SD GS VRLSGWVHR R HGG++F+D+RDHYG+TQ+V +P++  F 
Sbjct: 1   MHAYRSHTCGALRASDAGSAVRLSGWVHRKRDHGGLLFIDLRDHYGLTQLVLHPETPGFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R+E V+ IDG V++R A  +N N+ TG++E+  Q +E+LS A ELP+PVFG++EY
Sbjct: 61  AVERLRAESVIKIDGEVVAREAGVVNPNLPTGEVEVRVQGVEVLSEAAELPMPVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR   RFLDLRR+ LHKNIV R+R+I+S+R RM+ + F+E  TPILTASSPEGARDF
Sbjct: 121 PEDIRLANRFLDLRRERLHKNIVLRSRVISSIRQRMVGQGFLEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADRSL-EFYQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEF------------------SNGNTVSNNFLRICYDDA 282
           MSFV Q+D+   +E ++ GVFEEF                           F R+ Y  +
Sbjct: 240 MSFVTQEDVFAAIEPLMHGVFEEFGEGKPVSPIDGVHVFTNDFGETFEHKGFERLTYAQS 299

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +  YG+DKPDLRNPI M  V++HF    F +F+KIL  +    VWAIPA  GG +RAFCD
Sbjct: 300 MAWYGSDKPDLRNPIKMQVVSDHFRDGGFGLFAKILGADEKNAVWAIPAPTGG-SRAFCD 358

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
           RMN WA+ +GQPG+ YIFW  D+    A  GP+AK+L    TE +   L +  GD+ FF 
Sbjct: 359 RMNSWAQGEGQPGMGYIFWSEDQG---AWGGPIAKNLGQEPTETLMASLGLGKGDAAFFT 415

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           AG P  F  FA  AR  +  EL +I+ N F+FCWI+DFP +EW+EEEKK+DF+HNPF+MP
Sbjct: 416 AGLPSVFAKFAGLARTRVGTELKLIDENQFKFCWIVDFPMFEWSEEEKKVDFSHNPFSMP 475

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           QGG+E+L+  D L+I+AFQYD+VCNG+E+ SG IRNH +E+ML+AF   G    VVE +F
Sbjct: 476 QGGLEALETQDPLTIRAFQYDIVCNGYELCSGAIRNHKAEIMLKAFEIAGYDASVVEEQF 535

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           GG+  AF+ G PPHGG+A GIDRIVMLL G   +REV  FP++Q   DLLM +P+     
Sbjct: 536 GGMLNAFRYGAPPHGGLAPGIDRIVMLLAGETAIREVIAFPLNQQGEDLLMNAPTEAEER 595

Query: 583 QLRELGLRIVENPK 596
           QL+++ +R     K
Sbjct: 596 QLKDVHIRTAVPIK 609


>gi|56551611|ref|YP_162450.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|62287524|sp|Q5NPM1|SYD_ZYMMO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56543185|gb|AAV89339.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 596

 Score =  653 bits (1684), Expect = 0.0,   Method: Composition-based stats.
 Identities = 319/598 (53%), Positives = 417/598 (69%), Gaps = 7/598 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C  L  ++VG  VRLSGWVHR R HGG++F+D+RDHYG+TQ+VA+ DSA FE
Sbjct: 1   MHAYRTHNCSALRRANVGEKVRLSGWVHRKRDHGGLLFVDLRDHYGLTQIVADSDSAVFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +R E V+ + G V+ R+ E +N N+ TG+IE+ A ++++ S A+ELPLPV GE +Y
Sbjct: 61  KLDQLRLESVITVTGEVVERAPEVVNPNLATGEIEIRASEVDVQSFAQELPLPVAGEADY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YR+LDLRRD LH+NIV R+ +I S+R RMI + F E  TPILTASSPEGARD+
Sbjct: 121 PEDIRLRYRYLDLRRDRLHRNIVLRSNVIASLRRRMIEQGFNEYQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQ +KQL+M +GFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 181 LVPSRVHPGKFYALPQAPQMFKQLMMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT-VSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+  T+E VL GVFEEF  G T     F RI Y DA+  YG+DKPDLRNP+ +
Sbjct: 241 MSFVTQEDVFATIEPVLAGVFEEFGGGKTVTPAPFPRIAYRDAMLYYGSDKPDLRNPLKI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTEHF  S F +F+ +++          P  G   +R F D MN WAR +G  GL YI
Sbjct: 301 SDVTEHFRDSGFGLFAGMVAKGGVVRAIPAPEAGKN-SRKFFDDMNNWAREEGFAGLGYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +  E+G     GP+A++L    T+ +   L + + D  FF AG   +    A  ARN 
Sbjct: 360 NIKNGEAG-----GPIARNLGEDATQKLLADLGLGENDGVFFAAGKEGEAARLAGLARNR 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + + L +I  + F FCW++DFP +E++EE K++ F+HNPF+MPQGGME+L+  D L I A
Sbjct: 415 VGELLDLIEKDSFRFCWVVDFPMFEYDEEAKQVIFSHNPFSMPQGGMEALETKDPLDILA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+M +AF   G  + +V+  F G+  AF+ G PPHGG 
Sbjct: 475 YQYDIVCNGIELSSGAIRNHRPEIMYKAFEIAGYDQAMVDENFAGMINAFKYGAPPHGGA 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VMLL G  N+REV LFPM+Q   DL+MG+P+ VS  QL+EL LRI   P +
Sbjct: 535 APGVDRMVMLLAGEPNIREVVLFPMNQKAEDLMMGAPAAVSERQLKELSLRIAVKPTQ 592


>gi|163793772|ref|ZP_02187746.1| aspartyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159180883|gb|EDP65400.1| aspartyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 590

 Score =  652 bits (1683), Expect = 0.0,   Method: Composition-based stats.
 Identities = 314/596 (52%), Positives = 409/596 (68%), Gaps = 9/596 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  + VG  VR+SGW+HR R HG ++F+D+RDHYGITQ V + +   F+
Sbjct: 1   MHRYRSHTCSALRDTHVGETVRISGWIHRRRDHGQLVFIDLRDHYGITQCVTDVEDPAFQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR E V+C+ G V+ RS ET+N+ + TGQIE+     E+LS A+++PL V  E + 
Sbjct: 61  EVEKVRLESVVCVTGRVVKRSDETVNSKLPTGQIEVRIDSFEVLSAADQVPLQVNSEEDA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR +YR+LDLRR+ +HKNI+ R+ II S+R RM+ + F E  TPILTASSPEGARDF
Sbjct: 121 GEDIRLRYRYLDLRREKVHKNIMLRSAIIASIRRRMVEQGFTEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E VL GVF EFS    V   F RI Y +++ +YG+DKPDLR PI + 
Sbjct: 241 MSFVEQEDVFAAVEPVLAGVFNEFSQW-QVPGPFPRIPYRESMLKYGSDKPDLRIPIEIA 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E F  S+F +F+KI+           P  G   +RA CDRMN WA+ QG PGL Y+ 
Sbjct: 300 DVSELFRESDFAIFAKIVGGGGVVRAVPGPKCG---SRAICDRMNSWAQDQGAPGLGYMI 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E+      GP+A  L       I+    M DGD+ FF AG        A  AR  +
Sbjct: 357 FAEGEA-----RGPIASRLPAEKIAEIKAATGMGDGDAVFFSAGKEGDAAKLAGQARVKL 411

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +LG+I  + +  CWI+DFP YE +E+  KI+F+HNPF+MPQGGME+L+  D L I A+
Sbjct: 412 GNDLGLIEKDVYRLCWIVDFPMYELDEKTGKIEFSHNPFSMPQGGMEALESQDPLDILAY 471

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  E+M +AF   G   EVV+++F G+  AF+ G PPHGGIA
Sbjct: 472 QYDVVCNGIELSSGAIRNHRPEIMYKAFEIAGYGPEVVDDKFAGMINAFKFGAPPHGGIA 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIDRIVMLL   +N+REV LFPM+Q   DL+M +P+ V  EQLREL +++   PK
Sbjct: 532 PGIDRIVMLLADVQNLREVILFPMNQRAEDLMMNAPNEVRPEQLRELSIKLALPPK 587


>gi|259418879|ref|ZP_05742796.1| aspartyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259345101|gb|EEW56955.1| aspartyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 594

 Score =  652 bits (1683), Expect = 0.0,   Method: Composition-based stats.
 Identities = 337/596 (56%), Positives = 428/596 (71%), Gaps = 6/596 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH +R+H+C +L  S VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS  F 
Sbjct: 1   MHAFRSHTCAELNKSHVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R    +NA I TG+IE+  + IE+L  +EELPL VFGE+EY
Sbjct: 61  EIEKVRSEWCIRIDGEVKARDESLVNAKIPTGEIEVFIRDIEVLGKSEELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N+V R+ +I S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQRNMVLRSNMIRSIRNRMWDQGFNEYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q D+ +T+  V+ GVFEEF  G  V   N + +I Y DA   YG+DKPDLRNPI 
Sbjct: 241 MSFVTQQDVFDTIAPVIAGVFEEFGQGRKVDAANEWPQISYKDAALWYGSDKPDLRNPIK 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M  V+EHF  S F +F+K+L      E+ AIPA  GG +R FCDRMN +A+ +G PG+ Y
Sbjct: 301 MQVVSEHFAGSGFAIFAKLLEQEGT-EIRAIPAPTGG-SRKFCDRMNAFAQKEGLPGMGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IFWR ++ G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F + A  ARN
Sbjct: 359 IFWR-EKDGEMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKTFEAVAGRARN 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I +EL + + + F F WI+DFP YE +EE  KIDF HNPF+MPQGGM++L G D L ++
Sbjct: 418 VIGEELNLTDKDRFAFAWIVDFPIYEADEETGKIDFEHNPFSMPQGGMDALNG-DPLDVR 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
             QYDL CNG+E+ SG IRNH  E+M +AF   G  KE VE RFGG+  AFQ G PPHGG
Sbjct: 477 GNQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            AAGIDR+VMLL    N+REV +FPM+Q   DL+M +PS    EQL ELGLR++  
Sbjct: 537 CAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMAAPSEPMSEQLMELGLRVIPQ 592


>gi|254502618|ref|ZP_05114769.1| aspartyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222438689|gb|EEE45368.1| aspartyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 593

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 345/596 (57%), Positives = 439/596 (73%), Gaps = 3/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CGDL +SD G  +RLSGWVHRVR HGG++F+D+RDHYG+TQ V +PDSA F 
Sbjct: 1   MHPYRSHTCGDLRLSDEGQTIRLSGWVHRVRDHGGVLFIDLRDHYGMTQCVVDPDSAAFG 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VRSEW + ID  V  R+ ETIN ++ TG+IE+  + +E+L  A+ELPLPVFGE+EY
Sbjct: 61  LAETVRSEWCIRIDATVKKRTEETINPDLPTGEIEVFIRDMEVLGSAKELPLPVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+ LH N++ R+ ++  +R RM A  F E  TPI+TASSPEGARDF
Sbjct: 121 PEEVRLKYRFLDLRREKLHNNMILRSNVVRDIRDRMWAIGFNEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q ++ +T+E V+ GVFE+F N   V+ N+ +I Y D+   YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQQEVFDTIEPVIAGVFEKFGNDRPVNRNWPQISYKDSALWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+ +L   PG E+ AIPA  GG +R FCDRMN++A+ +G PG+ YIF
Sbjct: 301 IVSEHFAGSGFAIFANLLE-QPGTEIRAIPAPKGG-SRKFCDRMNKFAQGEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E G++   GP+AK++    TEAIR +L ++ GD+ FF+ G P +F + AA AR  I
Sbjct: 359 WRKAEDGSMEAAGPLAKNIGPERTEAIRQQLGLEVGDAAFFLGGKPKQFQAVAAKARVTI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG  + + FEF WI+DFP YE +EE  +IDF HNPF+MPQGGME+L+G D L +  +
Sbjct: 419 GEELGHTDKDRFEFAWIVDFPIYEKDEETGEIDFEHNPFSMPQGGMEALEG-DPLEVLGW 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG E+ SG IRNH  E+M +AF   G   E V  RFGG+  AFQ G PPHGG A
Sbjct: 478 QYDLSCNGHELVSGAIRNHKPEIMYKAFEIAGYPNEEVNKRFGGMVNAFQYGAPPHGGCA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDRIVMLL    N+REV LFPM+Q   DL+MG+P+     QLREL LR+    +
Sbjct: 538 AGIDRIVMLLADEANIREVMLFPMNQKAEDLMMGAPNEPDTAQLRELHLRLNLPEE 593


>gi|154247069|ref|YP_001418027.1| aspartyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|238686728|sp|A7IK27|SYD_XANP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|154161154|gb|ABS68370.1| aspartyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 623

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 367/626 (58%), Positives = 463/626 (73%), Gaps = 33/626 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  + VG  VRLSGW HR+R HGG++F+D+RDHYG+TQVV +PDSA F+
Sbjct: 1   MHRYRSHTCGALSTAQVGEIVRLSGWCHRIRDHGGVLFIDLRDHYGLTQVVVDPDSAAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ VR+EWV+ IDG V  R   T N ++ TG +E+ A ++E+L  + ELPLPVFG+ EY
Sbjct: 61  DAEKVRAEWVIRIDGKVRLRPEGTENPDLATGAVEVYATELEVLGPSAELPLPVFGDVEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YRFLDLRR+ LH+NI+ R  II++MR RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEETRLRYRFLDLRREKLHRNIMTRGAIIDAMRSRMKGQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQL+M SGFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI   +E V+ GVFE+F+ G  V+  + RI Y +++R+YGTDKPDLRNP++M 
Sbjct: 241 MSFVEQEDIFAAVEPVITGVFEQFAEGKPVTQKWPRIPYAESLRKYGTDKPDLRNPLVMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+EHF  S F+VF+++L V    EVWAIPA GGG +RAFCDRMN WA+S+GQPGL YI 
Sbjct: 301 NVSEHFRGSGFKVFARMLEVEKN-EVWAIPAPGGG-SRAFCDRMNSWAQSEGQPGLGYIM 358

Query: 361 WR------------------------------LDESGNVAGMGPVAKHLNIVNTEAIRVR 390
           WR                              + E G V   GP+A ++    TEAIR +
Sbjct: 359 WRDLSADAAAGGEKAVKDALEKSRGPGAGEGHVVEPGVVG-AGPLANNIGPERTEAIRAQ 417

Query: 391 LDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK 450
           LD++ GD+ FF+AGDP KF  FA  AR  + +EL +++ + FE  WI+DFPFYE++EEEK
Sbjct: 418 LDLKAGDAAFFVAGDPDKFVKFAGLARTRVGEELNLVDKDRFELAWIVDFPFYEYSEEEK 477

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K+DF+HNPF+MPQGG+++L   D LSIKAFQYD+ CNG+EIASGGIRNH  E M++AF  
Sbjct: 478 KVDFSHNPFSMPQGGLDALNTQDPLSIKAFQYDIACNGYEIASGGIRNHRPEAMVKAFEI 537

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G   + VE RFGG+YRAFQ G PPHGG+AAG+DRIVMLL G  N+RE+SLFPM+Q   D
Sbjct: 538 AGYDAQTVEERFGGMYRAFQYGAPPHGGMAAGVDRIVMLLCGVTNLREISLFPMNQQALD 597

Query: 571 LLMGSPSTVSVEQLRELGLRIVENPK 596
           LLMG+P+  + +QLREL +R     K
Sbjct: 598 LLMGAPAEAAPKQLRELHIRPAPQAK 623


>gi|99080476|ref|YP_612630.1| aspartyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|123379042|sp|Q1GIZ8|SYD_SILST RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|99036756|gb|ABF63368.1| aspartyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 594

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 336/596 (56%), Positives = 425/596 (71%), Gaps = 6/596 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH +R+H+C +L  S VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+A+PDS  F 
Sbjct: 1   MHAFRSHTCAELNKSHVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R    +NA I TG+IE+  + IE+L  +EELPL VFGE+EY
Sbjct: 61  EIEKVRSEWCIRIDGEVKARDESLVNAKIPTGEIEVFIRDIEVLGKSEELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N+V R+ +I S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQRNMVLRSNMIRSIRNRMWDQGFNEYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN--TVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q D+ +T+  V+ GVFEEF  G      N + +I Y DA   YG+DKPDLRNPI 
Sbjct: 241 MSFVTQQDVFDTIAPVIAGVFEEFGQGRKVDAPNEWPQISYKDAALWYGSDKPDLRNPIK 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M  V+EHF  S F +F+K+L      E+ AIPA  GG +R FCDRMN +A+ +G PG+ Y
Sbjct: 301 MQVVSEHFRGSGFAIFAKLLEQEGT-EIRAIPAPTGG-SRKFCDRMNAFAQKEGLPGMGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IFWR    G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F + A  ARN
Sbjct: 359 IFWREGADG-MEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKTFEAVAGRARN 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I +EL + + + F F WI+DFP YE +EE  KIDF HNPF+MPQGGM++L G D L ++
Sbjct: 418 VIGEELNLTDKDRFAFAWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALNG-DPLDVR 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
             QYDL CNG+E+ SG IRNH  E+M +AF   G  KE VE RFGG+  AFQ G PPHGG
Sbjct: 477 GNQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            AAGIDR+VMLL    N+REV +FPM+Q   DL+M +PS    EQL ELGLR++  
Sbjct: 537 CAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMAAPSEPMSEQLMELGLRVIPQ 592


>gi|260752796|ref|YP_003225689.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552159|gb|ACV75105.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 596

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 320/598 (53%), Positives = 417/598 (69%), Gaps = 7/598 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C  L  ++VG  VRLSGWVHR R HGG++F+D+RDHYG+TQ+VA+ DSA FE
Sbjct: 1   MHAYRTHNCSALRRANVGEKVRLSGWVHRKRDHGGLLFVDLRDHYGLTQIVADSDSAVFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +R E V+ + G V+ R+ E IN N+ TG+IE+ A ++++ S A+ELPLPV GE +Y
Sbjct: 61  KLDQLRLESVITVTGEVVERAPEVINPNLATGEIEIRASEVDVQSFAQELPLPVAGEADY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YR+LDLRRD LH+NIV R+ +I S+R RMI + F E  TPILTASSPEGARD+
Sbjct: 121 PEDIRLRYRYLDLRRDRLHRNIVLRSNVIASLRRRMIEQGFNEYQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQ +KQL+M +GFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 181 LVPSRVHPGKFYALPQAPQMFKQLMMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT-VSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+  T+E VL GVFEEF  G T     F RI Y DA+  YG+DKPDLRNP+ +
Sbjct: 241 MSFVTQEDVFATIEPVLAGVFEEFGGGKTVTPAPFPRIAYRDAMLYYGSDKPDLRNPLKI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTEHF  S F +F+ +++          P  G   +R F D MN WAR +G  GL YI
Sbjct: 301 SDVTEHFRDSGFGLFAGMVAKGGVVRAIPAPEAGKN-SRKFFDDMNNWAREEGFAGLGYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +  E+G     GP+A++L    T+ +   L + + D  FF AG   +    A  ARN 
Sbjct: 360 NIKNGEAG-----GPIARNLGEDATKKLLADLGLGENDGVFFAAGKEGEAARLAGLARNR 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + + L +I  + F FCW++DFP +E++EE K++ F+HNPF+MPQGGME+L+  D L I A
Sbjct: 415 VGELLDLIEKDSFRFCWVVDFPMFEYDEEAKQVIFSHNPFSMPQGGMEALETKDPLDILA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+M +AF   G  + +V+  F G+  AF+ G PPHGG 
Sbjct: 475 YQYDIVCNGIELSSGAIRNHRPEIMYKAFEIAGYDQAMVDENFAGMINAFKYGAPPHGGA 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VMLL G  N+REV LFPM+Q   DL+MG+P+ VS  QL+EL LRI   P +
Sbjct: 535 APGVDRMVMLLAGEPNIREVVLFPMNQKAEDLMMGAPAAVSERQLKELSLRIAVKPTQ 592


>gi|332185155|ref|ZP_08386904.1| aspartyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332014879|gb|EGI56935.1| aspartyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 604

 Score =  652 bits (1682), Expect = 0.0,   Method: Composition-based stats.
 Identities = 358/600 (59%), Positives = 442/600 (73%), Gaps = 10/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C  L    VG  VRLSGWVHR R HGG++F+D+RDHYGITQ+VA+ D+    
Sbjct: 1   MHAYRTHTCAALTAEAVGQTVRLSGWVHRKRDHGGVLFVDLRDHYGITQIVADSDTPALA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I ++VR E V+ IDG+V +RSA TIN N+ TG+IE+ A+   +LS AEELP+PV GE+EY
Sbjct: 61  ILEAVRVESVVTIDGVVKARSAGTINPNLATGEIEIFAKGATVLSAAEELPMPVAGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YRFLDLRR+TLH NIV+RT++I  MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLRYRFLDLRRETLHANIVRRTQVIADMRRRMETAGFTEYSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+++  TME V+ G+FE+F++G TV+    F RI Y +++ +YG DKPDLRNP+I
Sbjct: 241 MSFVTQEEVWETMEPVIGGIFEKFADGRTVTPIGQFPRIPYSESMLKYGNDKPDLRNPLI 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLA 357
           + +V+ HF  S F +F KI+         AIPA G    +R F D MNEWAR++G  GL 
Sbjct: 301 ITDVSAHFTTSGFGLFEKIVGSGGVVR--AIPAPGTAEKSRKFFDEMNEWARAEGHAGLG 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  +  E G     GP+AK+      EAI   L +   D  FF AG        A  AR
Sbjct: 359 YVTRKGGEFG-----GPIAKNHGTEGMEAIYAALGLGPDDGLFFAAGKVEAATKLAGLAR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A++LG+I    F  CWI+DFPFYEW+E+EKK++FAHNPF+MPQGGME+L   D LS+
Sbjct: 414 TRVAEQLGLIEEGAFRLCWIVDFPFYEWDEDEKKVEFAHNPFSMPQGGMEALTSADPLSL 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA+QYDLVCNGFEIASG IRN   E+M+ AF  VG+SK  VE RFGGLYRAFQ G PPHG
Sbjct: 474 KAYQYDLVCNGFEIASGSIRNQSPELMVAAFEKVGLSKADVEERFGGLYRAFQYGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+AAG+DRIVML+ GA+N+RE+SLFPM+Q   DLLMG+PS +S +Q+REL LR    PKK
Sbjct: 534 GMAAGVDRIVMLICGAQNLREISLFPMNQRAEDLLMGAPSLLSAKQMRELALRSTAEPKK 593


>gi|89055657|ref|YP_511108.1| aspartyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|122999376|sp|Q28MH9|SYD_JANSC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|88865206|gb|ABD56083.1| aspartyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 591

 Score =  652 bits (1681), Expect = 0.0,   Method: Composition-based stats.
 Identities = 330/594 (55%), Positives = 422/594 (71%), Gaps = 4/594 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+HSC  L  ++VG  +RLSGWVHR R HGG+IF+D+RDH+GITQ++ +PDS  F 
Sbjct: 1   MHAYRSHSCAALTAANVGETIRLSGWVHRRRDHGGVIFIDLRDHFGITQILCDPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R+E+ + IDG V +R+ E +N  + TG+IE+  + +E+L  A ELPL VFG++EY
Sbjct: 61  EVEKLRAEFCIRIDGEVKARAPELVNEKLPTGEIEVYIRDMEVLGAAGELPLQVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYR+LDLRR+ +  N++ R+ ++ S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLKYRYLDLRREKMQTNMMLRSDVVASIRKRMWDKQFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR + G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRQHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T+E VLRGVFEEF +G TV   +  I Y DA   YGTDKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIEPVLRGVFEEFGDGATVDQQWPLISYADAALWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L             KGG  +R FCDRMN++A+ QG PG+ YIF
Sbjct: 301 IVSEHFAGSGFAIFAKLLEQEGTQVRAIPAPKGG--SRKFCDRMNKFAQEQGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G +   GP+AK++    TEAIR +LD+  GD+ FF+AG P +F + A  AR+ I
Sbjct: 359 WRDQGEG-MEAAGPLAKNIGPERTEAIRQQLDLGVGDAAFFLAGKPSQFEAVAGRARSVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             ELG+   N F F WI+DFP +E +EE  KIDF+HNPF+MPQGG+ +L G D LS+  +
Sbjct: 418 GDELGLTEQNRFAFAWIVDFPMFEADEETGKIDFSHNPFSMPQGGLAALDG-DPLSVLGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G   + V  RFGG+  AFQ G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHQPEIMFKAFEVAGYGADEVRKRFGGMVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           AGIDRIVMLL    N+REV LFPM+Q   DL+M +PS    +QL ELGLR++  
Sbjct: 537 AGIDRIVMLLADTANIREVILFPMNQRAEDLMMNAPSEPMPDQLMELGLRVLPQ 590


>gi|30250184|ref|NP_842254.1| aspartyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|46577227|sp|Q82SQ5|SYD_NITEU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|30180979|emb|CAD86164.1| aspartyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 593

 Score =  652 bits (1681), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 340/593 (57%), Gaps = 5/593 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +   + L GWVHR R HGG+IF+D+RD  GI Q+V +PD+ A F+IA+
Sbjct: 2   RTDYCGAINTRHLDKTITLCGWVHRRRDHGGVIFIDLRDREGIVQIVCDPDNVAAFQIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+VL I G V  R   T+N  I++G+IE+    IEIL+ +   P  +  +    E+
Sbjct: 62  KIRSEFVLAITGTVRHRPEGTVNHGILSGEIEVLVNAIEILNPSLTPPFQMDDDNLS-EA 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR +YR+LDLRR  + +NI  R ++  ++R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 IRLEYRYLDLRRPVMQRNIRLRHQVTMAVRIFLDQHGFIDVETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVNAGHFFALPQSPQLFKQLLMVSGFDRYYQITRCFRDEDLRADRQP-EFTQIDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I+  ME+++R +F    +  ++ + F R+ Y DA+  YG+DKPDLR P+++  +T
Sbjct: 240 LPENEIMGMMEDMIRRLFASVLDI-SLPDPFPRLSYADAMFLYGSDKPDLRVPLVLTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +      F+VF        G         GG  +R   D   ++    G  GLAYI    
Sbjct: 299 DLMQDVPFQVFRDAAQKAGGRVAALRVPGGGELSRKEIDEYTQFVGIYGAKGLAYIKIND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K L     ++I  R   Q+GD  FF A             R  I  E
Sbjct: 359 LTKGIEGLQSPILKFLPESVVQSILERTQAQNGDLVFFGADKAKVVNDALGALRVKIGHE 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             +   + ++  W++DFP +EW+EEEK+    H+PFT P  G E    +D     +  YD
Sbjct: 419 RNLAT-DSWQPLWVVDFPMFEWDEEEKRWQALHHPFTSPSQGHEDFLTSDPGKALSRAYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR H  ++  + F  + IS +  + +FG L  A Q G PPHGGIA G+
Sbjct: 478 MVLNGMEIGGGSIRIHRQDIQSKVFQALNISDDEAKLKFGFLLDALQYGAPPHGGIAFGL 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DRIV ++ GA ++R+V  FP +Q    LL  +P  V  +QLREL +R+     
Sbjct: 538 DRIVAMMTGADSIRDVIAFPKTQRAQCLLTQAPGAVEEKQLRELHIRLRRTEN 590


>gi|295399337|ref|ZP_06809319.1| aspartyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294978803|gb|EFG54399.1| aspartyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 591

 Score =  652 bits (1681), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/595 (39%), Positives = 352/595 (59%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+ CG++    VG  V L GWV + R  GG+IF+D+RD  GI QVV +P+       +A
Sbjct: 4   RTYYCGEITEKAVGEKVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFSPEVSKEALHVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+VL ++G V++R   T+N NI TG+IE+ A+++ I++ A+  P  +  + +  E
Sbjct: 64  EKVRNEYVLSVEGTVVAREEGTVNPNIPTGKIEIQAERVTIINEAKTPPFTIADQTDVAE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + + +  R R+  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 EVRLKYRYLDLRRPVMFRTLQLRHRVTKAVRDFLDGEGFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GF+RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHPGEFYALPQSPQVFKQLLMVAGFERYYQIARCFRDEDLRADRQP-EFTQIDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q+DI+   E ++  V +  + G  VS  F R+ YD+A+ RYG+DKPD R  + + +V
Sbjct: 243 FMSQEDIMQLTERMMAHVMK-VAKGIEVSLPFPRMSYDEAMSRYGSDKPDTRFGLELVDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E   HS F+VF+  ++     +   +       +R   D + E+    G  GLA++   
Sbjct: 302 SEIVKHSSFKVFAGAVANGGQVKAINVKGAASTYSRKDIDALAEFVARYGAKGLAWLKV- 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G +   GP+AK         +   L  +DGD   F+A             R  + +
Sbjct: 361 --EEGGLK--GPIAKFFTEEERSGLIETLMAEDGDLLLFVAARKEVVADALGALRLKLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +I+   F F WI+D+P  E++EE+ +   AH+PFTMP              ++A  Y
Sbjct: 417 DLNLIDETKFNFLWIIDWPLLEYDEEDGRYYAAHHPFTMPVREDLPQLETSPEKVRAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R    +V  + F  +G ++E    +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSMRIFERDVQEKMFRALGFTEEEARKQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS VS +QL EL  R+V  P+K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVSEQQLAEL--RLVVQPEK 589


>gi|253699951|ref|YP_003021140.1| aspartyl-tRNA synthetase [Geobacter sp. M21]
 gi|259511861|sp|C6E3W7|SYD_GEOSM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|251774801|gb|ACT17382.1| aspartyl-tRNA synthetase [Geobacter sp. M21]
          Length = 593

 Score =  651 bits (1680), Expect = 0.0,   Method: Composition-based stats.
 Identities = 242/593 (40%), Positives = 347/593 (58%), Gaps = 10/593 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
            RT  CG+L    +G  V L GWV + R HGG+IF+D+RD  GI+Q+V +P+      AK
Sbjct: 9   KRTSYCGELRGGHIGQEVTLMGWVSKRRDHGGLIFVDLRDRDGISQIVFDPERCAEAHAK 68

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             SVR+E+VL I G V +R   T+N  + TG+IE+   + ++L+ ++ LP  + G  +  
Sbjct: 69  AESVRNEYVLAIKGTVAARPEGTVNPKMKTGEIEVLVTECKLLNPSKALPFTLDGFVDVN 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLR  TL +N++ R+++    R  +    FIE  TP LT S+PEGARDFL
Sbjct: 129 ENIRLKYRYLDLRTGTLQQNLILRSKVAQLTRSYLSDNGFIELETPFLTKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N+G FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 189 VPSRINKGEFYALPQSPQLFKQILMVSGFDRYFQIVRCFRDEDLRADRQP-EFTQIDCEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++++DI+  ME ++  +F E      V     R+ Y +AIRR+G D PDLR  + +  
Sbjct: 248 SFIDREDIITVMEGLMARIFTEAKGVK-VELPIERMTYQEAIRRFGVDNPDLRFGLELVE 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++   +S F+VF+ +++     +   +    G  +R   D + E+A+  G  GLAY+  
Sbjct: 307 LSDIVKNSGFKVFADVVNGGGIVKGMNVK-GAGAMSRKEIDDLTEFAKIYGAKGLAYVKM 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                       P+AK         +    D ++GD   F+A  P          RNH+A
Sbjct: 366 TA-----EGWQSPIAKFFTPEEIATMDKAFDAKEGDLLLFVADKPKVVNDSLGKLRNHLA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            ++G+ + N F F WI DFP  EW+EE K+    H+PFT P         +D    +A  
Sbjct: 421 AKMGLTDPNVFRFVWITDFPLLEWDEEAKRWAAVHHPFTAPMDEDLQYVESDPGRCRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  EV    F  +G+S+E   ++FG L  A + G PPHGGIA 
Sbjct: 481 YDLVLNGNEIGGGSIRIHQEEVQSLMFKMLGLSEENARSKFGFLLDALEYGTPPHGGIAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR++ML+ G+ ++R+V  FP +Q    L+  +PS V   QLRELG+R+   
Sbjct: 541 GLDRLMMLITGSDSIRDVIAFPKTQKGACLMSDAPSGVDALQLRELGIRLAAK 593


>gi|126668401|ref|ZP_01739358.1| aspartyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126627110|gb|EAZ97750.1| aspartyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 610

 Score =  651 bits (1680), Expect = 0.0,   Method: Composition-based stats.
 Identities = 230/595 (38%), Positives = 349/595 (58%), Gaps = 7/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG++  S +   V L GWVHR R HGG+IFLD+RD  GI+QVV +PD    F +A+
Sbjct: 2   RSHYCGEINESHIDQEVTLCGWVHRRRDHGGVIFLDLRDRDGISQVVVDPDVPESFALAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R A T N+N+ TGQ+EL  +++ IL+ A   P P+    +  E 
Sbjct: 62  KVRSEYVVKITGRVRRRPAGTENSNMATGQVELLGKEVIILNAAATPPFPLDEHVDVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YRF+DLRR  +   +  R+R+ + +R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLRYRFIDLRRPEMLNRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++GSF+ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHEGSFFALPQSPQLFKQMLMVSGVDRYYQIAKCFRDEDLRADRQP-EFTQVDVEASF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V ++D++   E+++R +F++          F R+ + +A+ RYG+DKPDLR P+ + +V 
Sbjct: 241 VNEEDLMTLNEDMIRALFKDVMQVELPE--FPRMSHSEAMDRYGSDKPDLRIPLELQSVD 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + +F+VF+   + + G         GG  +R   D   ++    G  GLAYI    
Sbjct: 299 DLVANVDFKVFAGPANDDEGRVAALRVPNGGALSRKQIDEYTKYVGIYGARGLAYIKINE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K L      +I  R+  QDGD  FF A             R  +  +
Sbjct: 359 LAKGVEGLQSPIVKFLGADVALSIIERVGGQDGDIVFFGADKTNVVNEALGALRIKVGHD 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++ C  +   W++DFP +E   +   +   H+PFT P    E L  N   +  +  YD
Sbjct: 419 LNLLTC-QWAPMWVVDFPMFEELPD-GGLTAIHHPFTAPSCSPEELAAN-PATALSRAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  ++  + F  +GI++E    +FG L  A + G PPHGG+A G+
Sbjct: 476 MVLNGTELGGGSIRIHDQQMQQEVFRILGITEEESRAKFGFLLDALKFGCPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           DR+VML+ G+ ++R+V  FP +Q+   L+  +P  V  +QLREL +R+ ++ K +
Sbjct: 536 DRLVMLMTGSSSIRDVIAFPKTQSATCLMTQAPGAVDEKQLRELHIRLRKSAKAV 590


>gi|323490014|ref|ZP_08095235.1| aspartyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396310|gb|EGA89135.1| aspartyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 590

 Score =  651 bits (1679), Expect = 0.0,   Method: Composition-based stats.
 Identities = 238/595 (40%), Positives = 346/595 (58%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG++  S +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+       I 
Sbjct: 3   RTHYCGEVNESVIGQRVTLKGWVQKRRDLGGLIFVDVRDRSGIVQVVFNPEISKEAAAIG 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +S+R+E+V+ IDGLV+ R+A  INA + TG+IE+      +++ A+  P  +    +  E
Sbjct: 63  ESLRNEFVVHIDGLVVERAAGQINATMKTGKIEVQVDHATVINAAKNPPFAIEDNTDVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +++    R+ +  S+R  +  E FIE  TPILT S+PEGARD+LV
Sbjct: 123 DLRLKYRYLDLRRPAMYETFKMRSDVTKSIRRFLDEEGFIEVETPILTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Q+DMEMS
Sbjct: 183 PSRVHDGEFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQIDMEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +DI+   E ++  + ++  N +     F R+ Y +A+ R+G+DKPD+R  + + +V
Sbjct: 242 FQSMEDIIGMNERLMVQMMKDVKNVDIEPT-FQRMSYTEAMDRFGSDKPDVRFGLELVDV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++    S F+VF+  +      ++  +  +    +R   D + E+A   G  GLA++   
Sbjct: 301 SDLVKDSAFKVFTGAIENGGQVKLINVKGQAANYSRKDIDALGEFAAVYGAKGLAWLKVE 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                     GP+AK        A+  R   + GD   F+A             R    +
Sbjct: 361 -----EEGVKGPIAKFFEGEAATALTERAQAEAGDLLLFVADKKSVVADALGALRLKFGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+ + ++F WI D+P  E++E++ +   AH+PFTMP          D  S++A  Y
Sbjct: 416 ELGLIDSSVYKFLWITDWPLLEYDEKDGRYYAAHHPFTMPFEEDLDKLATDPQSVRAQAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G  R +  E+  Q F  +G SKE    +FG L  AF+ G PPHGGIA G
Sbjct: 476 DLVLNGYELGGGSARIYRREIQEQMFEVLGFSKEEANEQFGFLMEAFEYGTPPHGGIAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +  DLL  +PSTVS  QL EL L +     K
Sbjct: 536 LDRLVMLLAGRTNLRDTIAFPKTASASDLLTDAPSTVSGAQLDELSLSLNIQNNK 590


>gi|297539708|ref|YP_003675477.1| aspartyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297259055|gb|ADI30900.1| aspartyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 594

 Score =  651 bits (1679), Expect = 0.0,   Method: Composition-based stats.
 Identities = 229/592 (38%), Positives = 351/592 (59%), Gaps = 5/592 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L    +G  V L GW HR R HGG+IF+D+RD  G+ Q+V NPD  A F IA+
Sbjct: 2   RTHYCGHLNREHIGQTVTLCGWAHRRRDHGGVIFIDLRDREGMAQIVINPDAKAAFAIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVRSE+VL +  +V +R     NAN+ TG++E+ A +IEIL+ +   P  +  E    E+
Sbjct: 62  SVRSEYVLKVTCVVQARPEGATNANLATGEVEMIATEIEILNASLTPPFQLDDENLT-ET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R ++R++DLRR  + KN++ R ++  ++R  +    FIE  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLQHRYIDLRRPAMQKNMMLRYKVSKNLRDYLDDNGFIEVETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHHGMFFALPQSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++ I++ +E ++R + ++  N + +   F R+ +  A+ RYG+DKPD+R  + +  ++
Sbjct: 240 MTENQIMDIVEEMIRQMLKKVQNVD-LPAAFPRMSFHKAMTRYGSDKPDMRVTLEITELS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR- 362
           +     +F+VF+   ++  G         G    R+  D   E+ +  G  GLAYI    
Sbjct: 299 DVMKDVDFKVFAGAANMVGGRVAALRVPGGAAIARSEIDAYTEFVKIYGAKGLAYIKIND 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + +        P+ K++++   +AI  R   Q+GD  FF A             R  +  
Sbjct: 359 VTKLNEEGLQSPIVKNIHVTALQAIIDRTGAQNGDIVFFGADKSKVVNEALGALRLKVGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           + G ++   +   W++DFP +E +EE  +    H+PFT P+ G E L   +  +  +  Y
Sbjct: 419 DKGHVDGRAWAPLWVVDFPMFEHDEENDRWAALHHPFTAPKDGHEDLLVTNPGAALSKAY 478

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  +V  + F  + ISKE  + +FG L  A Q G PPHGG+A G
Sbjct: 479 DMVLNGWEVGGGSVRIHKQDVQSKVFDALKISKEEAQEKFGFLLDALQYGAPPHGGLAFG 538

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+V L+ GA+++R+V  FP +Q    L+  +P+ V  +QLREL +R+   
Sbjct: 539 LDRLVTLMTGAESIRDVIAFPKTQRAQCLMTNAPNEVDEKQLRELHIRVRSQ 590


>gi|83953355|ref|ZP_00962077.1| aspartyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83842323|gb|EAP81491.1| aspartyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 616

 Score =  650 bits (1678), Expect = 0.0,   Method: Composition-based stats.
 Identities = 338/618 (54%), Positives = 427/618 (69%), Gaps = 27/618 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL   +VG  VRLSGWVHRVR HGGI+F+D+RDHYG+TQV+ +PDS  F 
Sbjct: 1   MHAYRSHTCADLSKENVGDKVRLSGWVHRVRDHGGILFIDLRDHYGMTQVLCDPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R A+ +N  I TG+IE+  + IE+L  A+ELPL VFG++EY
Sbjct: 61  EVEKVRSEWCIRIDGEVKARDADLVNTKIPTGEIEVFVRDIEVLGPAKELPLQVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ +  N+V R+ +++S+R RM  +NF E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQDNMVLRSDVVSSIRKRMWDQNFKEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ VL G+FEEF  G  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVLTGIFEEFGGGKAVDQEWPQISYKDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F +F+K+L      E+ AIPA  GG +R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSDHFRDSGFAIFAKLLEQEGT-EIRAIPAPTGG-SRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDE------------------------SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
           WR                            G +   GP+AK++    TEAIR +L +  G
Sbjct: 359 WREKTADSVAQELGITVKEAQAKLKAGEVEGGMEPAGPLAKNIGPERTEAIRQQLGLDVG 418

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+ FF+ G P  F   A  ARN I  ELG+ + N F F WI+DFP YE +EE  KIDF H
Sbjct: 419 DAAFFLGGKPKSFEGVAGRARNVIGAELGLTDENRFAFAWIVDFPIYEKDEETGKIDFEH 478

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           NPF+MPQGGM++L G D L +  +QYDL CNG+E+ SG IRNH  E+M +AF   G  K+
Sbjct: 479 NPFSMPQGGMDALMG-DPLEVLGYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKD 537

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
            VE RFGG+  AFQ G PPHGG AAGIDRIVMLL    N+REV LFPM+Q   DL+M +P
Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRIVMLLAEEANIREVILFPMNQRAEDLMMNAP 597

Query: 577 STVSVEQLRELGLRIVEN 594
           S    +QL ELGLR++  
Sbjct: 598 SEPQSDQLMELGLRVIPQ 615


>gi|312110103|ref|YP_003988419.1| aspartyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311215204|gb|ADP73808.1| aspartyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 591

 Score =  650 bits (1678), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/595 (39%), Positives = 352/595 (59%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+ CG++    VG  V L GWV + R  GG+IF+D+RD  GI QVV +P+       +A
Sbjct: 4   RTYYCGEITEKAVGEKVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFSPEVSKEALHVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+VL ++G V++R   T+N NI TG+IE+ A+++ I++ A+  P  +  + +  E
Sbjct: 64  EKVRNEYVLSVEGTVVAREEGTVNPNIPTGKIEIQAERVTIINEAKTPPFTIADQTDVAE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + + +  R R+  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 EVRLKYRYLDLRRPVMFRTLQLRHRVTKAVRDFLDGEGFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GF+RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHPGEFYALPQSPQVFKQLLMVAGFERYYQIARCFRDEDLRADRQP-EFTQIDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q+DI+   E ++  V +  + G  VS  F R+ YD+A+ RYG+DKPD R  + + +V
Sbjct: 243 FMSQEDIMQLTERMMAHVMK-VAKGIEVSLPFPRMSYDEAMSRYGSDKPDTRFGLELVDV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E   HS F+VF+  ++     +   +       +R   D + E+    G  GLA++   
Sbjct: 302 SEIVKHSSFKVFAGAVANGGQVKAINVKGAASTYSRKDIDALAEFVARYGAKGLAWLKV- 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G +   GP+AK         +   L  +DGD   F+A             R  + +
Sbjct: 361 --EEGGLK--GPIAKFFTEEERSGLIETLMAEDGDLLLFVADRKEVVADALGALRLKLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +I+   F F WI+D+P  E++EE+ +   AH+PFTMP              ++A  Y
Sbjct: 417 DLNLIDETKFNFLWIIDWPLLEYDEEDGRYYAAHHPFTMPVREDLPQLETSPEKVRAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R    +V  + F  +G ++E    +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSMRIFERDVQEKMFRALGFTEEEARKQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS VS +QL EL  R+V  P+K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVSEQQLAEL--RLVIQPEK 589


>gi|295706711|ref|YP_003599786.1| aspartyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804370|gb|ADF41436.1| aspartyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 593

 Score =  650 bits (1677), Expect = 0.0,   Method: Composition-based stats.
 Identities = 230/600 (38%), Positives = 346/600 (57%), Gaps = 9/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           M   R++ CGD+     G  V L GWV + R  GG+IF+D+RD  G+ QVV NP+ +   
Sbjct: 1   MMTKRSYYCGDVTEQATGETVLLKGWVQKRRDLGGLIFIDLRDRGGVVQVVFNPEKSAEA 60

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            +IA+ VR+E+VL + G V++R   T+N N+ TG+IE+ A++I +L+ A+  P  +  + 
Sbjct: 61  LKIAEDVRNEFVLEVQGTVVAREEGTVNPNLKTGKIEVHAEQITVLNKAKTPPFAIADQT 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  E +R KYR+LDLRR  +   +  R  I  ++R  +   +F++  TPILT S+PEGAR
Sbjct: 121 EVSEDVRLKYRYLDLRRSEMFNTLKMRNDITKTIRDFLDQNDFLDVETPILTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV++G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D
Sbjct: 181 DYLVPSRVHEGEFYALPQSPQIFKQLLMVSGVERYYQIARCFRDEDLRADRQP-EFTQID 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ Q+DI+   E ++  V +   + +  +  F R+ YD+A+ RYG+DKPD R  + 
Sbjct: 240 IETSFLSQEDIMTMTEEMMSKVMKRVKDLDI-TTPFPRMSYDEAMSRYGSDKPDTRFEME 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + N++E      F+VFS  +      +   +       +R   D + E+ +  G  GLA+
Sbjct: 299 LVNLSELVKDCGFKVFSAAVENGGEVKAINVKGASSSYSRKDIDALTEFVKIYGAKGLAW 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +    D        GP+AK  N    +     L  ++GD   F+A             R 
Sbjct: 359 LKVEAD-----GLKGPIAKFFNEDEQKQFAEALQTEEGDLLLFVADKKSVVADALGALRL 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+E GII+   F F W+ D+P  E +EE+ +   AH+PFTMP      +  +D   ++
Sbjct: 414 KLAKEQGIIDETKFNFLWVTDWPLLEHDEEDNRYYAAHHPFTMPVREDLPMLESDPGQVR 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+  G +R +  ++  + F  +G + E    +FG L  AF+ G PPHGG
Sbjct: 474 AQAYDLVLNGYELGGGSLRIYERDIQEKMFKTLGFTLEEAYEQFGFLLEAFEYGTPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           IA G+DR+VMLL G  N+R+   FP + +   LL  +P  VS  QL EL L++ +   + 
Sbjct: 534 IALGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTNAPGEVSEAQLDELHLQVKKQKTEA 593


>gi|229198529|ref|ZP_04325233.1| Aspartyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228585032|gb|EEK43146.1| Aspartyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 591

 Score =  650 bits (1677), Expect = 0.0,   Method: Composition-based stats.
 Identities = 231/595 (38%), Positives = 343/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++IL+ ME ++  V ++       S  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQEEILDMMERMMTKVMKDAKGVEI-SAPFPRMTYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLSLKEEK 591


>gi|83944314|ref|ZP_00956769.1| aspartyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83844858|gb|EAP82740.1| aspartyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 616

 Score =  650 bits (1677), Expect = 0.0,   Method: Composition-based stats.
 Identities = 339/618 (54%), Positives = 427/618 (69%), Gaps = 27/618 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL   +VG  VRLSGWVHRVR HGGI+F+D+RDHYG+TQV+ +PDS  F 
Sbjct: 1   MHAYRSHTCADLSKENVGDKVRLSGWVHRVRDHGGILFIDLRDHYGMTQVLCDPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R A+ +N  I TG+IE+  + IE+L  A+ELPL VFG++EY
Sbjct: 61  EVEKVRSEWCIRIDGEVKARDADLVNTKIPTGEIEVFVRDIEVLGPAKELPLQVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ +  N+V R+ +++S+R RM  +NF E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQDNMVLRSDVVSSIRKRMWDQNFKEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ VL G+FEEF  G  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVLTGIFEEFGGGKAVDQEWPQISYKDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F +F+K+L      E+ AIPA  GG +R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSDHFRDSGFAIFAKLLEQEGT-EIRAIPAPTGG-SRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDE------------------------SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
           WR                            G +   GP+AK++    TEAIR +L +  G
Sbjct: 359 WREKTADSVAQELGITVKEAQAKLKAGEVEGGMEAAGPLAKNIGPERTEAIRQQLGLDVG 418

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+ FF+ G P  F   A  ARN I  ELG+ + N F F WI+DFP YE +EE  KIDF H
Sbjct: 419 DAAFFLGGKPKSFEGVAGRARNVIGAELGLTDENRFAFAWIVDFPIYEKDEETGKIDFEH 478

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           NPF+MPQGGM++L G D L +  +QYDL CNG+E+ SG IRNH  E+M +AF   G  KE
Sbjct: 479 NPFSMPQGGMDALMG-DPLEVLGYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKE 537

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
            VE RFGG+  AFQ G PPHGG AAGIDRIVMLL    N+REV LFPM+Q   DL+M +P
Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRIVMLLAEEANIREVILFPMNQRAEDLMMNAP 597

Query: 577 STVSVEQLRELGLRIVEN 594
           S    +QL ELGLR++  
Sbjct: 598 SEPQSDQLMELGLRVIPQ 615


>gi|308070356|ref|YP_003871961.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase) [Paenibacillus
           polymyxa E681]
 gi|305859635|gb|ADM71423.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 592

 Score =  650 bits (1677), Expect = 0.0,   Method: Composition-based stats.
 Identities = 240/595 (40%), Positives = 350/595 (58%), Gaps = 10/595 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
             R+H CG L  + +G  V L+GWV   R  GG++F+D+RD  GI Q+V NP       +
Sbjct: 1   MKRSHECGALTHAHIGETVTLNGWVQTRRDLGGVLFIDLRDRSGIVQIVFNPAYSGNALQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA  VRSE+VL + G ++ R AETIN N+ TG+IE+   +IE+L+ ++  P  +    E 
Sbjct: 61  IADRVRSEYVLEVTGTIVKRDAETINPNLPTGEIEVRVTEIEVLNASKTPPFFIENGVEV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            ES+R KYR+LDLRR  +++ +  R++     R  +  E F+E  TPILT SSPEGARD+
Sbjct: 121 DESLRLKYRYLDLRRPEMYQTLKLRSKAAKIFRDFLDGEEFVEVETPILTKSSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++G F+ALPQ+PQ YKQLLM  G +RY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRVHEGEFFALPQSPQLYKQLLMVGGLERYYQIARCFRDEDLRADRQP-EFTQVDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF++QDD+L  ME ++  +F+E      +   F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 240 TSFMQQDDLLPMMERLMVKLFKETVGVE-LETPFQRITHAEAMDKYGSDKPDLRFGLELI 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV +    S  +VF+ ++      +V      G   +R   D +  +A   G  GLA+I 
Sbjct: 299 NVNDIVATSGVKVFASVIEKGGEVKVLNAKGCGT-WSRKDIDDLGPYAARYGAKGLAWIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +  E       GP+ K       EA++ R   ++GD   F A +           R  I
Sbjct: 358 VKEGE-----FKGPIVKFFTPEEIEALKERTGAEEGDLLLFSADNKKVVADVLGALRLKI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + LG+I+ N F+F W++DFP   ++EE+K+    H+PFT P+     L   D   ++A 
Sbjct: 413 GRHLGLIDDNKFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKDEDLGLLDTDPGQVRAQ 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  +V  + F  + ++ E V ++FG L  AF+ G PPHGGIA
Sbjct: 473 AYDIVLNGYEVGGGSMRIYKRDVQEKMFKALNLAPEEVTDKFGYLLDAFEYGTPPHGGIA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G DR+VMLL G  N+RE   FP + +  DLLM +P+ V   QL +L +RI   P
Sbjct: 533 FGFDRLVMLLAGRTNLRETIAFPKTASATDLLMDAPAEVDQAQLEQLHIRIAPKP 587


>gi|89094833|ref|ZP_01167766.1| aspartyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89080888|gb|EAR60127.1| aspartyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 586

 Score =  650 bits (1677), Expect = 0.0,   Method: Composition-based stats.
 Identities = 230/592 (38%), Positives = 348/592 (58%), Gaps = 8/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGDL    +G  + L GWVHR R HGG+IFLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDLRKEHIGEDITLCGWVHRRRDHGGVIFLDVRDREGLAQVVFDPDREESFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+V+ I G V +R   T+N  + TG+IE+  +++ IL+ AE  P  +   +   E 
Sbjct: 62  SCRNEFVVEIKGTVRNRPEGTVNPEMPTGEIEVLGKELVILNKAETPPFQLDEHQNVGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R ++R++DLRR  + + +  R+++ N++R  +    F++  TPIL  ++PEGARD+LVP
Sbjct: 122 VRLRHRYIDLRRPEMQEKMRFRSKVTNAIRNYLDDNGFLDIETPILNRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRVHEGQFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ I+   EN++R +F E  + +    +F R+ Y +A++RYG+DKPDLR P+ + +V 
Sbjct: 241 MDEEGIMALTENMIRKLFLEMKDVD--LGDFPRMPYSEAMQRYGSDKPDLRYPMELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF+   +             G    R   D   ++    G  GLA+I    
Sbjct: 299 DLMAEIEFKVFAGPANDPKSRVTALKVPGGAQLTRKNIDDYTKFVSIYGAKGLAWIKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E+G      P+ K L    T AI  RL  ++GD  FF A             R  + ++
Sbjct: 359 IENGVNGLQSPIIKFLGDDVTMAIMERLGAENGDIVFFGADKAKIVSEALGALRIKVGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +  C  +   W++DFP +E  E +  +   H+PFT P    + LK N  L   +  YD
Sbjct: 419 LNMAQCE-WAPLWVVDFPMFE--ETDAGLTALHHPFTAPSCTADELKAN-PLEALSRAYD 474

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  E+  +    +GIS E  E++FG L  A Q G PPHGG+A G+
Sbjct: 475 MVLNGCELGGGSVRIHDQEMQAKVLEILGISDEEAEDKFGFLLNALQFGAPPHGGLAFGL 534

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR++ML+ G +++REV  FP +Q+   ++  +P  VS  QLREL +++ + P
Sbjct: 535 DRLIMLMTGTESIREVIAFPKTQSASCMMTEAPGEVSAAQLRELNIKLRKTP 586


>gi|42783531|ref|NP_980778.1| aspartyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|62287576|sp|Q730D1|SYD_BACC1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|42739460|gb|AAS43386.1| aspartyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 591

 Score =  650 bits (1677), Expect = 0.0,   Method: Composition-based stats.
 Identities = 230/595 (38%), Positives = 343/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++IL+ ME ++  V ++       S  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQEEILDMMERMMTKVMKDAKGVEI-SAPFPRMTYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMTTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + + F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKYNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLSLKEEK 591


>gi|163735286|ref|ZP_02142721.1| aspartyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161391500|gb|EDQ15834.1| aspartyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 589

 Score =  650 bits (1677), Expect = 0.0,   Method: Composition-based stats.
 Identities = 331/592 (55%), Positives = 424/592 (71%), Gaps = 4/592 (0%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YR+H+C DL   DVG  VRLSGWVHRVR HGG++FLD+RDHYGITQ++ +PDS  F+  
Sbjct: 1   MYRSHTCADLSAQDVGETVRLSGWVHRVRDHGGVLFLDLRDHYGITQLLCDPDSPVFDQM 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+EW + +DGLV +R A  +N  I TG+IE+  + +E+L  +EELPL VFG++EYPE
Sbjct: 61  EKVRAEWCIRVDGLVKARDASLVNDKISTGEIEVFVKGLEVLGASEELPLQVFGDQEYPE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  +  N+  R+ ++ S+R +M   +F E  TPI+TASSPEGARDFLV
Sbjct: 121 ETRLKYRYLDLRRANMQANMKLRSDVVASLRQQMWKADFREFQTPIITASSPEGARDFLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+EMS
Sbjct: 181 PSRLHPGRFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDIEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV Q D+ + ++ VL G+FEEF NG  V   + +I Y DA   YG+DKPDLRNPI M +V
Sbjct: 241 FVTQQDVFDVIQPVLTGLFEEFGNGKAVDQEWPQISYKDAALWYGSDKPDLRNPIKMQSV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +EHF  S F +F+ +L      E+ AIPA GGG +R FCDRMN +A+ +G PG+ YIFWR
Sbjct: 301 SEHFAGSGFAIFANLLEQEGT-EIRAIPAPGGG-SRKFCDRMNAFAQKEGLPGMGYIFWR 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  ARNHI  
Sbjct: 359 DQGAG-MEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKAFEPVAGKARNHIGM 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+ + N F F WI+DFP YE + E  +IDF HNPF+MPQGG+E+L+G D L++  +QY
Sbjct: 418 ELGLTDQNRFAFAWIVDFPIYEKDSETGRIDFEHNPFSMPQGGLEALQG-DPLTVVGYQY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL CNG+E+ SG IRNH  E+M +AF   G  ++ V  RFGG+  AFQ G PPHGG AAG
Sbjct: 477 DLSCNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVRKRFGGMVNAFQYGAPPHGGCAAG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IDRIVMLL    N+REV LFPM+Q   DL+M +PS    EQL ELGLR++  
Sbjct: 537 IDRIVMLLAEEANIREVILFPMNQRAEDLMMSAPSEPESEQLMELGLRVIPK 588


>gi|86136523|ref|ZP_01055102.1| aspartyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85827397|gb|EAQ47593.1| aspartyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 617

 Score =  650 bits (1676), Expect = 0.0,   Method: Composition-based stats.
 Identities = 329/620 (53%), Positives = 428/620 (69%), Gaps = 27/620 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  S+VG  VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+PDS  F 
Sbjct: 1   MHAYRSHTCAELNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGITQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V++R    +N  + TG+IE+  + IE+L  AEELPL VFGE+EY
Sbjct: 61  EIEKVRSEWCIRIDGNVLARDESLVNDKLPTGEIEVFIRDIEVLGKAEELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N++ R+ ++ S+R RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQQNMLLRSNMVQSIRKRMWDKGFNEYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T++ V++GVFEEF  G  V + + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVTQQDVFDTIQPVMQGVFEEFGGGRKVDSEWPQISYRDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L             KGG  +R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSEHFAGSGFAIFAKLLEQEGTEVRAIPAPKGG--SRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLD--------------------ESGNV----AGMGPVAKHLNIVNTEAIRVRLDMQDG 396
           WR                      +SG +       GP+AK++    TEAIR +L +  G
Sbjct: 359 WRKQSPDSIAQERGITVKEVNALVKSGEITLGNEAAGPLAKNIGPERTEAIRQQLGLDVG 418

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+ FF+ G P  F   A  ARN I +ELG+ + + F F W++DFP YE +EE  KIDF H
Sbjct: 419 DAAFFLGGKPKAFEGVAGRARNVIGEELGLTDKDRFAFAWVVDFPIYEADEETGKIDFEH 478

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           NPF+MPQGGM++L+GN  L +  +QYDL CNG+E+ SG IRNH  E+M +AF   G  K+
Sbjct: 479 NPFSMPQGGMDALEGN-PLEVLGYQYDLACNGYELVSGAIRNHRPEIMFKAFEIAGYGKD 537

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
            VE RFGG+  AFQ G PPHGG AAGIDR+VMLL    N+REV +FPM+Q   DL+M +P
Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRMVMLLADEANIREVIMFPMNQRAEDLMMSAP 597

Query: 577 STVSVEQLRELGLRIVENPK 596
           S    +QL ELGLR++   +
Sbjct: 598 SEPMSDQLMELGLRVIPQDQ 617


>gi|254488012|ref|ZP_05101217.1| aspartyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214044881|gb|EEB85519.1| aspartyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 616

 Score =  650 bits (1676), Expect = 0.0,   Method: Composition-based stats.
 Identities = 335/618 (54%), Positives = 426/618 (68%), Gaps = 27/618 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL   +VG  VRLSGWVHRVR HGGI+F+D+RDHYGITQV+ +PDS  F 
Sbjct: 1   MHPYRSHTCADLSKENVGDKVRLSGWVHRVRDHGGILFIDLRDHYGITQVLCDPDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R+ + +NA I TG+IE+  + IE+L  ++ELPL VFG++EY
Sbjct: 61  DVEKVRSEWCIRIDGEVKARADDLVNAKIPTGEIEVFVRDIEVLGASKELPLQVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ +  N+V R+ +++S+R RM    F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREKMQANMVLRSDVVSSIRKRMWDRKFKEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ VL G+FEEF  G +V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVLTGIFEEFGGGKSVDQEWPQISYKDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L      ++ AIPA  GG +R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSEHFAGSGFAIFAKLLEQEGT-QIRAIPAPTGG-SRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDE------------------------SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
           WR                            G +   GP+AK++    TEAIR +L +  G
Sbjct: 359 WREKTADSVAQELGIPVKEAQAKLKSGEVEGGMEAAGPLAKNIGPERTEAIRQQLGLSVG 418

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+ FF+ G P  F   A  ARN I  ELG+ + N F F WI+DFP YE + E  KIDF H
Sbjct: 419 DAAFFLGGKPKAFEGVAGRARNVIGSELGLTDENRFAFAWIVDFPIYEKDAETGKIDFEH 478

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           NPF+MPQGGM++L G D L +  +QYDL CNG+E+ SG IRNH  E+M +AF   G  K+
Sbjct: 479 NPFSMPQGGMDALMG-DPLEVLGYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKD 537

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
            VE RFGG+  AFQ G PPHGG AAGIDRIVMLL    N+REV LFPM+Q   DL+M +P
Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRIVMLLAEEANIREVILFPMNQRAEDLMMNAP 597

Query: 577 STVSVEQLRELGLRIVEN 594
           +    +QL ELGLR++  
Sbjct: 598 NDPMPDQLMELGLRVIPQ 615


>gi|261418412|ref|YP_003252094.1| aspartyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767629|ref|YP_004133130.1| aspartyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374869|gb|ACX77612.1| aspartyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112495|gb|ADU94987.1| aspartyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 590

 Score =  650 bits (1676), Expect = 0.0,   Method: Composition-based stats.
 Identities = 240/595 (40%), Positives = 358/595 (60%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-- 62
           RT+ CG++  + VG  V L GWV + R  GG+IF+D+RD  GI QVVA+PD +   +A  
Sbjct: 3   RTYYCGEVPETAVGERVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVASPDVSAEALAAA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VRSE+VL ++G V++R+ ET+N NI TG+IE+ A++IEI++ A+  P  +  + +  E
Sbjct: 63  ERVRSEYVLSVEGTVVARAPETVNPNIATGRIEIQAERIEIINEAKTPPFSISDDTDAAE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + + +  R +I  ++R  + +E F+E  TP+LT S+PEGARD+LV
Sbjct: 123 DVRLKYRYLDLRRPVMFQTLALRHKITKTVRDFLDSERFLEIETPMLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  G +RY+QIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 183 PSRVHPGEFYALPQSPQIFKQLLMVGGVERYYQIARCFRDEDLRADRQP-EFTQIDIEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+EQ+DI++  E ++  V +     +     F RI YD+A+  YG+DKPD+R  + + +V
Sbjct: 242 FIEQEDIIDLTERMMAAVVKAAKGIDI-PRPFPRITYDEAMSCYGSDKPDIRFGLELVDV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E    S F+VF++ +      +           +R   D + E+A   G  GLA++   
Sbjct: 301 SEIVRDSAFQVFARAVKEGGQVKAINAKGAAPRYSRKDIDALGEFAGRYGAKGLAWLK-- 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +      GP+AK        A+R  L ++DGD   F+A +     +     R  + +
Sbjct: 359 ---AEGEELKGPIAKFFTDEEQAALRRALAVEDGDLLLFVADEKAIVAAALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+     F W+ D+P  E++EEE +   AH+PFTMP      L   +  +++A  Y
Sbjct: 416 ELGLIDEAKLAFLWVTDWPLLEYDEEEGRYYAAHHPFTMPVRDDIPLLETNPSAVRAQAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R    +V  + F  +G S+E    +FG L  AF+ G PPHGGIA G
Sbjct: 476 DLVLNGYELGGGSLRIFERDVQEKMFRALGFSEEEARRQFGFLLEAFEYGTPPHGGIALG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +P  VS +QL EL L +V    +
Sbjct: 536 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPGPVSDKQLEELHLAVVLPENE 590


>gi|206976035|ref|ZP_03236945.1| aspartyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217961892|ref|YP_002340462.1| aspartyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222097846|ref|YP_002531903.1| aspartyl-tRNA synthetase [Bacillus cereus Q1]
 gi|229141140|ref|ZP_04269681.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|226736377|sp|B7HQG0|SYD_BACC7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781716|sp|B9IYX5|SYD_BACCQ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|206745787|gb|EDZ57184.1| aspartyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217067278|gb|ACJ81528.1| aspartyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221241904|gb|ACM14614.1| aspartyl-tRNA synthetase [Bacillus cereus Q1]
 gi|228642303|gb|EEK98593.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 591

 Score =  650 bits (1676), Expect = 0.0,   Method: Composition-based stats.
 Identities = 231/595 (38%), Positives = 343/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++IL+ ME ++  V ++       S  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQEEILDMMERMMTKVMKDAKGVEI-SAPFPRMTYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLSLKEEK 591


>gi|56421107|ref|YP_148425.1| aspartyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|62287517|sp|Q5KWS9|SYD_GEOKA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56380949|dbj|BAD76857.1| aspartyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 590

 Score =  650 bits (1676), Expect = 0.0,   Method: Composition-based stats.
 Identities = 241/595 (40%), Positives = 358/595 (60%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-- 62
           RT+ CG++  + VG  V L GWV + R  GG+IF+D+RD  GI QVVA+PD +   +A  
Sbjct: 3   RTYYCGEVPETAVGERVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVASPDVSAEALAAA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VRSE+VL ++G V++R+ ET+N NI TG IE+ A++IEI++ A+  P  +  + +  E
Sbjct: 63  ERVRSEYVLSVEGTVVARAPETVNPNIATGSIEIQAERIEIINEAKTPPFSISDDTDAAE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + + +  R +I  ++R  + +E F+E  TP+LT S+PEGARD+LV
Sbjct: 123 DVRLKYRYLDLRRPVMFQTLALRHKITKTVRDFLDSERFLEIETPMLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  G +RY+QIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 183 PSRVHPGEFYALPQSPQIFKQLLMVGGVERYYQIARCFRDEDLRADRQP-EFTQIDIEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+EQ DI++  E ++  V +     +     F RI YD+A+ RYG+DKPD+R  + + +V
Sbjct: 242 FIEQKDIMDLTERMMAAVVKAAKGIDI-PRPFPRITYDEAMSRYGSDKPDIRFGLELVDV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E   +S F+VF++ +      +           +R   D + E+A   G  GLA++   
Sbjct: 301 SEIVRNSAFQVFARAVKEGGQVKAINAKGAAPRYSRKDIDALGEFAGRYGAKGLAWLK-- 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +      GP+AK        A+R  L ++DGD   F+A +     +     R  + +
Sbjct: 359 ---AEGEELKGPIAKFFTDEEQAALRRALAVEDGDLLLFVADEKAIVAAALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+     F W+ D+P  E++EEE +   AH+PFTMP      L   +  +++A  Y
Sbjct: 416 ELGLIDEAKLAFLWVTDWPLLEYDEEEGRYYAAHHPFTMPVRDDIPLLETNPSAVRAQAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R    +V  + F  +G S+E    +FG L  AF+ G PPHGGIA G
Sbjct: 476 DLVLNGYELGGGSLRIFERDVQEKMFRALGFSEEEARRQFGFLLEAFEYGTPPHGGIALG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +P  VS +QL EL L +V    +
Sbjct: 536 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPGPVSDKQLEELHLAVVLPENE 590


>gi|261405429|ref|YP_003241670.1| aspartyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261281892|gb|ACX63863.1| aspartyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 592

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 244/600 (40%), Positives = 356/600 (59%), Gaps = 10/600 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-- 60
             RTH CG L  +++G  V L+GWV   R  GG++F+D+RD  GI Q+V NPD +     
Sbjct: 1   MKRTHHCGHLTTANIGETVTLNGWVQTRRDLGGVLFIDLRDRSGIMQIVFNPDFSGEALA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  VRSE+V+ + G V+ R  ET N N+ TG+IE+    IE+L+ A+  P  +    E 
Sbjct: 61  VADKVRSEFVVAVSGKVVKRDPETFNPNLPTGEIEVQVTSIEVLNAAKTPPFFIEDGVEV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + K ++ R++     R  +  E F++  TPILT SSPEGARD+
Sbjct: 121 DEQLRLKYRYLDLRRPEMQKTLMLRSKASKVFRDFLDDEGFVDVETPILTKSSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G F+ALPQ+PQ YKQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRVHAGEFFALPQSPQIYKQLLMVSGLERYYQIARCFRDEDLRADRQP-EFTQVDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF++++D+LN ME ++  +F+E      ++  F RI Y DA+ +YG+DKPDLR  + + 
Sbjct: 240 TSFMDREDLLNMMEQLMVKLFKETIGVE-LATPFQRISYADAMGKYGSDKPDLRFGMELI 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + +    S  +VFS ++      +       G    R   D +  +A   G  GLA+I 
Sbjct: 299 EMNDIVASSGVKVFSSVIEKGGEVKCLNAKGCGT-WTRKEIDDLGPYAARYGAKGLAWIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +  E       GP+ K  +    EA+R R   +DGD   F A +           R  I
Sbjct: 358 VKEGE-----FKGPIVKFFSEQEIEAVRERTGAEDGDLLLFSADNKKVVADVLGALRLKI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++LG+IN N ++F W++DFP + ++EE K+    H+PFT P+     L   D L+++A 
Sbjct: 413 GRQLGLINDNEYKFAWVLDFPLFSYDEEAKRYVAEHHPFTRPKDEDLGLMDTDPLAVRAE 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  E+  + F+ +G+S EV  ++FG L  AF+ G PPHGGIA
Sbjct: 473 AYDIVLNGYEVGGGSMRIYKREIQEKMFAALGMSPEVAHDKFGYLMDAFEYGTPPHGGIA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DR+VMLL G  N+RE   FP + +  DLLM +PS V   QL +L +++ + P    K
Sbjct: 533 FGLDRLVMLLAGRTNLRETIAFPKTASATDLLMDAPSQVDGGQLEQLHIKLAKKPGDEKK 592


>gi|159045173|ref|YP_001533967.1| aspartyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|189082096|sp|A8LI32|SYD_DINSH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157912933|gb|ABV94366.1| aspartyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 590

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 332/595 (55%), Positives = 430/595 (72%), Gaps = 5/595 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH +RTH+C +L    VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+ +PDS  F 
Sbjct: 1   MHAFRTHTCAELTKDAVGQTVRLSGWVHRVRDHGGVLFIDLRDHYGMTQVLCDPDSPVFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R    IN  I TG+IE+  + +E+L  AEELPLPVFG++EY
Sbjct: 61  QVEKVRSEWCIRIDGTVKARDESLINPKIPTGEIEVFIRDMEVLGTAEELPLPVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYRFLDLRR++LH NI+ R++++ S+R RM   +F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLKYRFLDLRRESLHDNIMLRSKVVQSIRKRMWDIDFTEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M  GFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVGGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T++ V+ G+FEEF  G  V  ++  I Y D+   YGTDKPDLRNPI M 
Sbjct: 241 MSFVSQQDVFDTIQPVIAGIFEEFGGGRRVDTDWPLISYRDSALWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F +F+K+L      E+ AIPA GGG +R FCDRMN++A+ QG PG+ YIF
Sbjct: 301 IVSDHFAGSGFAIFAKLLEQEGT-EIRAIPAPGGG-SRKFCDRMNKFAQEQGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G +   GP+AK++    TEAIR +L +Q GD+ FF+ G P  F + A  AR  I
Sbjct: 359 WRDQGQG-MEAAGPLAKNIGPERTEAIRQQLGLQVGDAAFFLGGKPASFEAVAGRARTVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ + F F WI+DFP YE + +E +IDF+HNPF+MPQGGM +L+G D L +  +
Sbjct: 418 GEELGLIDQDRFAFAWIVDFPMYEKD-DEGRIDFSHNPFSMPQGGMAALEG-DPLEVLGY 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  ++M +AF   G   + VE RFGG+  AF+ G PPHGG A
Sbjct: 476 QYDLACNGYELVSGAIRNHKLDIMYKAFEIAGYGADEVEKRFGGMVNAFKYGPPPHGGCA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           AGIDRIVMLL    N+REV +FPM+Q   DL+M +PS  + EQLR+L LR++   
Sbjct: 536 AGIDRIVMLLADTANIREVIMFPMNQRAEDLMMNAPSEPTGEQLRDLSLRVIPQE 590


>gi|329926805|ref|ZP_08281213.1| aspartate--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328939005|gb|EGG35373.1| aspartate--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 592

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 244/600 (40%), Positives = 356/600 (59%), Gaps = 10/600 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-- 60
             RTH CG L  +++G  V L+GWV   R  GG++F+D+RD  GI Q+V NPD +     
Sbjct: 1   MKRTHHCGHLTTANIGETVTLNGWVQTRRDLGGVLFIDLRDRSGIMQIVFNPDFSGEALA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  VRSE+V+ + G V+ R  ET N N+ TG+IE+    IE+L+ A+  P  +    E 
Sbjct: 61  VADKVRSEFVVAVSGKVVKRDPETFNPNLPTGEIEVQVTSIEVLNAAKTPPFFIEDGVEV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + K ++ R++     R  +  E F++  TPILT SSPEGARD+
Sbjct: 121 DEQLRLKYRYLDLRRPEMQKTLMLRSKASKVFRDFLDDEGFVDVETPILTKSSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G F+ALPQ+PQ YKQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRVHAGEFFALPQSPQIYKQLLMVSGLERYYQIARCFRDEDLRADRQP-EFTQVDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF++++D+LN ME ++  +F+E      ++  F RI Y DA+ +YG+DKPDLR  + + 
Sbjct: 240 TSFMDREDLLNMMEQLMVKLFKETIGVE-LATPFQRISYADAMGKYGSDKPDLRFGMELI 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + +    S  +VFS ++      +       G    R   D +  +A   G  GLA+I 
Sbjct: 299 EMNDIVASSGVKVFSSVIEKGGEVKCLNAKGCGT-WTRKEIDDLGPYAARYGAKGLAWIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +  E       GP+ K  +    EA+R R   +DGD   F A +           R  I
Sbjct: 358 VKEGE-----FKGPIVKFFSEQEIEAVRERTGAEDGDLLLFSADNKKVVADVLGALRLKI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++LG+IN N ++F W++DFP + ++EE K+    H+PFT P+     L   D L+++A 
Sbjct: 413 GRQLGLINDNEYKFAWVLDFPLFSYDEEAKRYVAEHHPFTRPKDEDLELMDTDPLAVRAE 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  E+  + F+ +G+S EV  ++FG L  AF+ G PPHGGIA
Sbjct: 473 AYDIVLNGYEVGGGSMRIYKREIQEKMFAALGMSPEVAHDKFGYLMDAFEYGTPPHGGIA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DR+VMLL G  N+RE   FP + +  DLLM +PS V   QL +L +++ + P    K
Sbjct: 533 FGLDRLVMLLAGRTNLRETIAFPKTASATDLLMDAPSQVDGGQLEQLHIKLAKKPGDEKK 592


>gi|229543724|ref|ZP_04432784.1| aspartyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229328144|gb|EEN93819.1| aspartyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 590

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 236/597 (39%), Positives = 348/597 (58%), Gaps = 9/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSAC 58
           M   R++ CGD+    +G  V L GWV R R  GG+IF+D+RD  GI Q+V N       
Sbjct: 1   MMEGRSYYCGDVTEQQIGEKVVLKGWVQRRRDLGGLIFIDLRDRAGIVQIVFNTAVSEEA 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A+ VR+E+VL ++G V++RS  T+N N+ TG+IE+ A ++ I++ A+  P  +  E 
Sbjct: 61  FKLAEKVRNEYVLEVEGKVIARSENTVNPNLKTGKIEIQADRLAIINNAKTPPFMIENET 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R KYR+LDLRR  + + +  R  I  S+R  +  E FI+  TP+LT S+PEGAR
Sbjct: 121 GVAEDVRLKYRYLDLRRPVMFETMKMRHAITKSIRGFLDEEGFIDVETPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV+ G FYALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D
Sbjct: 181 DYLVPSRVHPGEFYALPQSPQLFKQLLMISGFDRYYQIARCFRDEDLRADRQP-EFTQID 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ Q+DIL   E +++ + +E  N +       R+ Y++A+ RYG+DKPD R  + 
Sbjct: 240 IETSFMSQEDILTMTEKMIKRLMKEVKNIDI-ETPLPRLTYEEAVNRYGSDKPDTRFGME 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V+E   ++ F+VF+  ++     +           +R   D + E+A   G  GLA+
Sbjct: 299 LVDVSEIVQNAGFKVFASAVTSGGQVKAINAKGAASKYSRKDIDALGEFAARYGAKGLAW 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +      + N    GP+AK         +    + + GD   F+A             RN
Sbjct: 359 LK-----AENEGLKGPIAKFFTEAEQSQLAAATNAETGDLLLFVADKKSVVADALGALRN 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +ELG+I+ + F F W+ D+P  E++E+  +   AH+PFTMP          D  S+K
Sbjct: 414 KLGKELGLIDESKFNFLWVTDWPLLEYDEDAGRYTAAHHPFTMPFEEDIEKLETDPASVK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  +V  + F  +G SKE  +++FG L  AF  G PPHGG
Sbjct: 474 AQAYDIVLNGYELGGGSLRIYKRDVQEKMFKALGFSKEQAQSQFGFLLDAFDYGTPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIVMLL G  N+R+   FP + +   LL  +P  VS  QL EL L++    
Sbjct: 534 IALGLDRIVMLLAGRSNLRDTIAFPKTASASCLLTNAPGAVSEAQLDELQLKLKAKK 590


>gi|149200875|ref|ZP_01877850.1| aspartyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149145208|gb|EDM33234.1| aspartyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 593

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/596 (55%), Positives = 429/596 (71%), Gaps = 6/596 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+HSC DL  +DVG+ VRL+GWVHR+R HGG++F+D+RDHYG+TQ++ +PDS  F 
Sbjct: 1   MHAYRSHSCADLTKTDVGADVRLAGWVHRIRDHGGVLFIDLRDHYGVTQLICDPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +RSE+ + IDG V +R A  INA I TG+IE+  + +EIL  A ELPL VFG++EY
Sbjct: 61  QVEKLRSEYCIRIDGAVKARDAGLINAKIPTGEIEVFIRDMEILGSAAELPLQVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N+V R+ ++ +MR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREAMQRNMVLRSDVVAAMRRRMWDKGFREFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIRRYGTDKPDLRNPII 298
           MSFVEQ D+ +T+  V+ GVF+EF    TV     + +I Y D+   YGTDKPDLRNPI 
Sbjct: 241 MSFVEQQDVFDTIAPVIAGVFQEFGGDKTVDAPEAWPQISYADSALWYGTDKPDLRNPIK 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M +V+EHF  S F +F+K+L  +   E+ AIPA  GG +R FCDRMN +A+ +G PG+ Y
Sbjct: 301 MQDVSEHFRGSGFAIFAKLLEQDGT-EIRAIPAPTGG-SRKFCDRMNAFAQKEGLPGMGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I WR +  G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  AR 
Sbjct: 359 ILWR-EADGAMEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPAAFERVAGKART 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I  ELG+ + N F F WI+DFP YE +E   K+DF+HNPF+MPQGG+++L G D L + 
Sbjct: 418 VIGDELGLTDQNRFAFAWIVDFPMYEADETTGKVDFSHNPFSMPQGGIDALSG-DPLKVL 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            +QYDL CNG+E+ SG IRNH  ++M++AF   G  +E V  RFGG+  AFQ G PPHGG
Sbjct: 477 GYQYDLACNGYELVSGAIRNHKLDIMIKAFELAGYGEEEVRKRFGGMVNAFQYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            AAGIDRIVMLL G  N+REV +FPM+Q   DL+M +PS  + +QL ELGLRI+  
Sbjct: 537 CAAGIDRIVMLLAGTSNIREVIMFPMNQRAEDLMMNAPSDPTSDQLMELGLRIIPQ 592


>gi|296133426|ref|YP_003640673.1| aspartyl-tRNA synthetase [Thermincola sp. JR]
 gi|296032004|gb|ADG82772.1| aspartyl-tRNA synthetase [Thermincola potens JR]
          Length = 595

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/590 (40%), Positives = 356/590 (60%), Gaps = 11/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTH CG+L  +++G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD     F  
Sbjct: 9   KRTHHCGELRKTNIGEEVVLMGWVQRRRDHGGLIFVDLRDRSGLVQVVFSPDVDKEAFAK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+VL + G V++R   T+N N+ TG+I+++  ++ IL+ A+  P  +  + +  
Sbjct: 69  AEIIRSEYVLAVRGQVVARPEGTVNENLPTGEIDVNCLEVRILNKAKTPPFYIEEDIDVD 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  + +N++ R +   ++R  +    F+E  TP+LT S+PEGARD+L
Sbjct: 129 ENLRLKYRYLDLRRPDMQRNMILRHKTTMAIREFLDKAGFLEIETPMLTKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ +KQ+LM +G ++YFQI  CFRDED R+DR P EF Q+DMEM
Sbjct: 189 VPSRVNPGKFYALPQSPQIFKQILMVAGMEKYFQIVRCFRDEDLRADRQP-EFTQVDMEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+L   E +L   F   + G  ++  F R+ Y +AI RYG+DKPDLR  + + +
Sbjct: 248 SFVDIDDVLALTEEMLAHAFR--AAGIEITTPFERLTYKEAIDRYGSDKPDLRFGLELKD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            T+    S+F+VF+ + +     +        G  +R   D + ++    G  GLAYI  
Sbjct: 306 FTDIVKDSDFKVFASVAAGGGQVKGINAKGCAG-FSRKEIDDLTQFVGIYGAKGLAYIVV 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D         P+ K       + I  R + + GD  FF+A  P          R  +A
Sbjct: 365 TED-----GLKSPILKFFKEEEIKVILERFEAEPGDLLFFVADKPSIVADALGHLRVELA 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L +I+   F+F WI++FP  E++EEE++    H+PFT P      L  +D L ++A  
Sbjct: 420 RRLNLIDDKVFKFVWIVEFPLLEYDEEERRYVAIHHPFTSPMDEDIPLLDSDPLVVRAKA 479

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  +V  + F+ +G+S E    +FG +  AF+ G PPHGGIA 
Sbjct: 480 YDVVLNGVELGGGSIRIHSRQVQEKMFTLLGLSPEEAIEKFGFMLEAFEYGTPPHGGIAF 539

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VML+ G  ++R+V  FP +Q+  DL+  +PS V+ +QLREL +++
Sbjct: 540 GLDRMVMLMAGRDSIRDVIAFPKTQSATDLMTQAPSEVTAKQLRELHIKL 589


>gi|196039236|ref|ZP_03106542.1| aspartate--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029863|gb|EDX68464.1| aspartate--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 591

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 236/595 (39%), Positives = 346/595 (58%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E+F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEDFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +        G  +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAAGKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK        A+   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEEANALMTTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLNVKEEK 591


>gi|229175077|ref|ZP_04302594.1| Aspartyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608373|gb|EEK65678.1| Aspartyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 591

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 236/595 (39%), Positives = 345/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      EIA
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPAMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E  V   F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAVGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK        A+   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEEANALMATLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLQLSLKEEK 591


>gi|87199359|ref|YP_496616.1| aspartyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
 gi|97196761|sp|Q2G8P1|SYD_NOVAD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|87135040|gb|ABD25782.1| aspartyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 593

 Score =  649 bits (1675), Expect = 0.0,   Method: Composition-based stats.
 Identities = 351/598 (58%), Positives = 444/598 (74%), Gaps = 8/598 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CG L   DVG  VRLSGWVHR R HGG++F+D+RDHYG+TQ+VA+ DS    
Sbjct: 1   MHLYRSHTCGALSRGDVGQTVRLSGWVHRKRDHGGVLFVDLRDHYGMTQIVADADSPALP 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I +++R E V+ IDG V +RS  T+NAN+ TG+IE+ A+   +LS AEELP+PV GE+EY
Sbjct: 61  ILEALRVESVVTIDGEVKARSEGTVNANLSTGEIEVFARVATVLSAAEELPMPVAGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YRFLDLRR+TLH NIVKRT++I+ MR RM    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLRYRFLDLRRETLHANIVKRTKVISDMRRRMEGAGFTEYSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS--NNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+++  TME V+ GVFE F++G  V+   +F RI Y +A+ +YG+DKPDLRNPII
Sbjct: 241 MSFVTQEEVWETMEPVIGGVFEAFADGRKVTPIGSFPRIPYAEAMLKYGSDKPDLRNPII 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V+E F  S F +F KI+       +   P      +R F D MN+WAR++G  GL Y
Sbjct: 301 ISDVSEEFAQSGFGLFEKIVGTGGVVRLIPAPNTADK-SRKFFDEMNDWARAEGHAGLGY 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  +  E G     GP+AK+       A+  RL +   D CFF AG   +    A  AR 
Sbjct: 360 VTRKQGEFG-----GPIAKNHGADKMAALFDRLGLGPDDGCFFAAGKAEQAAKLAGAART 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A +LG+I+ + FE CWI+DFPFYEW+EE KK++F+HNPF+MPQGG+++L   D L+I 
Sbjct: 415 RVADQLGLIDKDRFELCWIVDFPFYEWDEENKKVEFSHNPFSMPQGGLDALNTQDPLTIN 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           AFQYDLVCNGFEIASG IRN   E M++AF  VG+SK  VE RFGGLYRAFQ G PPHGG
Sbjct: 475 AFQYDLVCNGFEIASGSIRNQSPETMVKAFEIVGLSKADVEERFGGLYRAFQYGAPPHGG 534

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +AAG+DRIVML+ GA+N+RE++LFPM+Q   DLLMG+PS  +++QLREL +R+VE  K
Sbjct: 535 MAAGVDRIVMLICGAQNLREITLFPMNQRAEDLLMGAPSPAALKQLRELNIRVVEQTK 592


>gi|229032053|ref|ZP_04188035.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228729245|gb|EEL80240.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 591

 Score =  649 bits (1674), Expect = 0.0,   Method: Composition-based stats.
 Identities = 234/595 (39%), Positives = 345/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E+F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEDFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK        A+   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEEANALMATLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLSLKEEK 591


>gi|294501364|ref|YP_003565064.1| aspartyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351301|gb|ADE71630.1| aspartyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 592

 Score =  649 bits (1674), Expect = 0.0,   Method: Composition-based stats.
 Identities = 230/597 (38%), Positives = 346/597 (57%), Gaps = 9/597 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EI 61
            R++ CGD+     G  V L GWV + R  GG+IF+D+RD  G+ QVV NP+ +    +I
Sbjct: 3   KRSYYCGDVTEQATGETVLLKGWVQKRRDLGGLIFIDLRDRGGVVQVVFNPEKSAEALKI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VL + G V++R   T+N N+ TG+IE+ A++I +L+ A+  P  +  + E  
Sbjct: 63  AEDVRNEFVLEVQGTVVAREEGTVNPNLKTGKIEVHAEQITVLNKAKTPPFAIADQTEVS 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  +   +  R  I  ++R  +   +F++  TPILT S+PEGARD+L
Sbjct: 123 EDVRLKYRYLDLRRSEMFNTLKMRNDITKTIRDFLDQNDFLDVETPILTKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E 
Sbjct: 183 VPSRVHEGEFYALPQSPQIFKQLLMVSGVERYYQIARCFRDEDLRADRQP-EFTQIDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI+   E ++  V +   + + V+  F R+ YD+A+ RYG+DKPD R  + + N
Sbjct: 242 SFLSQEDIMTMTEEMMSKVMKRVKDLD-VTTPFPRMSYDEAMSRYGSDKPDTRFEMELVN 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E      F+VFS  +      +   +       +R   D + E+ +  G  GLA++  
Sbjct: 301 LSELVKDCGFKVFSAAVENGGEVKAINVKGAASSYSRKDIDALTEFVKIYGAKGLAWLKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK  N    +     L  ++GD   F+A             R  +A
Sbjct: 361 EAD-----GLKGPIAKFFNEDEQKQFAEALQTEEGDLLLFVADKKSVVADALGALRLKLA 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +E GII+   F F W+ D+P  E +EE+ +   AH+PFTMP      +  +D   ++A  
Sbjct: 416 KEQGIIDETKFNFLWVTDWPLLEHDEEDNRYYAAHHPFTMPVREDLPMLESDPGQVRAQA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+  G +R +  ++  + F  +G + E    +FG L  AF+ G PPHGGIA 
Sbjct: 476 YDLVLNGYELGGGSLRIYERDIQEKMFKTLGFTLEEAYEQFGFLLEAFEYGTPPHGGIAL 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           G+DR+VMLL G  N+R+   FP + +   LL  +P  VS  QL EL L++ +   + 
Sbjct: 536 GLDRLVMLLAGRTNLRDTIAFPKTASASCLLTNAPGEVSEAQLDELHLQVKKQKTEA 592


>gi|296536445|ref|ZP_06898542.1| aspartate--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296263224|gb|EFH09752.1| aspartate--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 600

 Score =  649 bits (1674), Expect = 0.0,   Method: Composition-based stats.
 Identities = 311/593 (52%), Positives = 407/593 (68%), Gaps = 9/593 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  SD G   RLSGWVHR R HGG++F+D+RDHYG+TQ V    S  F 
Sbjct: 1   MHAYRTHTCGALRASDAGQTARLSGWVHRKRDHGGLLFIDLRDHYGLTQCVIPAGSEVFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A ++R E V+ + G V++R A T+N  + TG IEL  + +E+ S AE LP+ V G++E+
Sbjct: 61  SADALRPESVITVTGEVVAREAGTVNDKLPTGAIELRVKALEVQSHAEVLPIQVAGDQEF 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+  H+N++ R  +I S+R RMI + F+E  TPILTASSPEGARDF
Sbjct: 121 PEDLRLRYRFLDLRREKQHRNMLLRAGVIASIRRRMIEQGFVEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR + G+FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPSRNHPGTFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEASRADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEF-SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+   +E V+ G+F EF          F RI YD A+  YG+DKPDLRNP+ +
Sbjct: 241 MSFVTQEDVFAAIEPVMEGIFVEFGGGRKVTPAPFPRIPYDTAMLDYGSDKPDLRNPLKI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +FSK+++        AIPA G     R F D++NEWAR++G  GL Y
Sbjct: 301 TDVTESFRESGFGLFSKVVAGGGIVR--AIPAPGAADRPRGFFDKLNEWARAEGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +           GP+AK+L     EAIR   ++Q GD+ FF AG   +   FA   R 
Sbjct: 359 IQFAA-----EGAKGPIAKNLEAERVEAIRAACNLQPGDAVFFAAGKKDETPKFAGKVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +ELG+I  + F FCWI+DFP YE NEE  ++DF+HNPF+MPQGG+E+L   + L IK
Sbjct: 414 KLGEELGLIAQDEFRFCWIVDFPMYELNEETGQVDFSHNPFSMPQGGLEALNSMNPLDIK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           AFQYD+VCNG E++SG IRNH  ++M++AF   G + + VE RFGG+  AF+ G PPHGG
Sbjct: 474 AFQYDIVCNGIELSSGAIRNHRPDIMIRAFEIAGYTAQTVEERFGGMLNAFRYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            A GIDR+VMLL    N+REV LFP++Q   DL+MG+P+ V   +L+EL +++
Sbjct: 534 SAPGIDRMVMLLADEPNIREVILFPLNQQGQDLMMGAPAAVEPARLKELSIKL 586


>gi|87118959|ref|ZP_01074857.1| aspartyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86165350|gb|EAQ66617.1| aspartyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 589

 Score =  649 bits (1673), Expect = 0.0,   Method: Composition-based stats.
 Identities = 228/591 (38%), Positives = 343/591 (58%), Gaps = 7/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG+L  S++   + L GWVHR R HGG+IFLD+RD  G+TQVV +PD    F +A 
Sbjct: 2   RSHYCGELNASNISQEITLCGWVHRRRDHGGVIFLDVRDREGLTQVVFDPDRADSFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+V+ + GLV +R   T+N N+ TG+IE+    +EIL+ A+  P  +   +   E 
Sbjct: 62  SVRNEYVVKLTGLVRARPEGTVNPNMATGEIEVLGTSLEILNAAQTPPFQLDEHQSVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR K RF+DLRR  +   +  R+++ + +R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 IRLKNRFVDLRRPEVQAKMRFRSKVTSVLRNYLDDNGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G+F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTQEGNFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I++  E+++ G+F++  N +     F  + Y  A+  YG+DKPDLR P+ +  V+
Sbjct: 241 MGEKEIMSMTEDMIVGLFKQLLNVD--LGTFPTMPYAQAMETYGSDKPDLRIPLKIVTVS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + +F+VFS       G         G    R   D   ++    G  GLAYI    
Sbjct: 299 DLMENVDFKVFSGPAVDPKGRVAALKVPGGNALTRKQIDAYTKYVSIYGAKGLAYIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +       P+ K L +   + +  RL  +DGD  FF +             R  + ++
Sbjct: 359 KSNLEEGLQSPIVKFLPVEVRQQLLERLGAEDGDLIFFGSDSEKVVNEALGALRCKLGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +  C  +   W++DFP +E   +   I   H+PFT P   +E LK N  L+  +  YD
Sbjct: 419 LELYTCE-WAPLWVVDFPMFEETSD-GGITAIHHPFTAPSCSVEELKAN-PLTALSQAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H S++    F  + I +   E +FG L  A + G PPHGG+A G+
Sbjct: 476 MVLNGTELGGGSIRIHQSDMQQTVFELLNIDEAEQEEKFGFLLDALKFGAPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR+VML+ G+ ++R+V  FP +Q+   LL  +P  VS +QL+EL +R+ + 
Sbjct: 536 DRLVMLMTGSASIRDVIAFPKTQSATCLLTQAPGEVSEKQLKELSIRVRKP 586


>gi|84685295|ref|ZP_01013193.1| aspartyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84666452|gb|EAQ12924.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 592

 Score =  648 bits (1672), Expect = 0.0,   Method: Composition-based stats.
 Identities = 327/596 (54%), Positives = 426/596 (71%), Gaps = 5/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL  ++VG  +RLSGWVHRVR HGG++F+D+RDHYG+TQ++A+ DS  F 
Sbjct: 1   MHAYRSHTCADLTKANVGDTIRLSGWVHRVRDHGGVLFIDLRDHYGVTQILADEDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +RSE+ + IDG V++R    +N  + TG+IE+  Q +E+L  A+ELPL VFG++EY
Sbjct: 61  EVEKLRSEYCIRIDGKVLARDDSLVNPKLPTGEIEVFIQDMEVLGAAQELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +NI  R+ +I SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREEMQRNITLRSDVIASMRKRMWDQGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQ +KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQLFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ DI +T++ V++GVFEEF  G  V   + +I Y D+   YGTDKPDLRNPI M 
Sbjct: 241 MSFVEQQDIFDTIQPVIQGVFEEFGGGRKVDTTWEQISYADSALWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L  +   E+ AIPA GGG +R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSEHFAGSGFAIFAKLLEQDGT-EIRAIPAPGGG-SRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  ++G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  AR  I
Sbjct: 359 WRDGDNG-MEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPESFERVAGKARTVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+ + + F F WI+DFP YE +EE   IDF+HNPF+MPQ   +     D L++  +
Sbjct: 418 GEELGLTDMDRFAFAWIVDFPMYENDEETGDIDFSHNPFSMPQNLDD--LDGDPLAVLGY 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  EVM + F   G  ++ V  RFGGL  AFQ G PPHGG A
Sbjct: 476 QYDLACNGYELISGAIRNHKREVMFRVFEKAGYGQDEVLKRFGGLATAFQYGAPPHGGCA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           AGIDRIVMLL    N+REV +FPM+Q   DL+M +PS  + EQLREL LR++E PK
Sbjct: 536 AGIDRIVMLLADEANIREVMMFPMNQRAEDLMMDAPSEPTNEQLRELSLRVIEQPK 591


>gi|91776734|ref|YP_546490.1| aspartyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|123253951|sp|Q1GYN8|SYD_METFK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91710721|gb|ABE50649.1| aspartyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 594

 Score =  648 bits (1672), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/592 (39%), Positives = 354/592 (59%), Gaps = 5/592 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L    +G  V L GW HR R HGG+IF+D+RD  G+ Q+V +PD+   F+IA+
Sbjct: 2   RTHYCGHLNREHIGQTVTLCGWAHRRRDHGGVIFIDLRDREGMAQIVIDPDTPEAFKIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+VL +   V +R   T+N NI TG++E+ A +IEIL+ +   P  +  +    E 
Sbjct: 62  SVRNEFVLKVVCKVRARPEGTVNLNIPTGEVEMLASEIEILNPSLTPPFMLDDDNLS-EM 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R ++R++DLRR  + KN++ R R+   +R ++ ++ FIE  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLEHRYIDLRRPAMQKNLMLRYRVAKVLRDQLDSQGFIEVETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHHGQFFALPQSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I+  +E ++R +F++  + + + N F RI + +A+ RYG+DKPD+R  + +  +T
Sbjct: 240 LNEEEIMTIVEGMIRTMFKQVQDID-LPNPFPRISFAEAMNRYGSDKPDMRVTLEITELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF+   +   G         G   +R+  D   E+ +  G  GLAYI    
Sbjct: 299 DVMKDVDFKVFAGAANSAGGRVAAIRVPNGAALSRSEIDAYTEFVKIYGAKGLAYIKVND 358

Query: 364 DES-GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                      P+ K+++    +AI  R   Q GD  FF A             R  I  
Sbjct: 359 ASKLNEEGLQSPIVKNIHEPALKAIIERTGAQSGDIVFFGADKAKIVNEALGALRTKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E G ++   +   W++DFP +E +EE  +    H+PFT P+ G E L  ++  +  +  Y
Sbjct: 419 EKGHVDGRAWAPLWVVDFPMFEHDEENDRWVALHHPFTSPKDGHEDLLASNPGAALSKAY 478

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  EV  + F  + ISKE  + +FG L  A Q G PPHGG+A G
Sbjct: 479 DMVLNGWEVGGGSVRIHKQEVQSKVFDALKISKEEAQEKFGFLLDALQYGAPPHGGLAFG 538

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+V L+ GA+++R+V  FP +Q    L+  +P+ V  +QLREL +R+ + 
Sbjct: 539 LDRLVTLMAGAESIRDVIAFPKTQRAQCLMTKAPNEVDEKQLRELHIRVRQQ 590


>gi|269926066|ref|YP_003322689.1| aspartyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789726|gb|ACZ41867.1| aspartyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 603

 Score =  648 bits (1672), Expect = 0.0,   Method: Composition-based stats.
 Identities = 248/601 (41%), Positives = 362/601 (60%), Gaps = 3/601 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           +T +CG+L    +G  V L GWV+  R HGG+IF+DIRD +GITQVV +PD+   F +A+
Sbjct: 3   KTWTCGELNTKHIGQEVTLYGWVNSRRDHGGVIFIDIRDRWGITQVVFSPDNQDAFRLAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +VRSEWV+ + G V  R   T N  + TG+IEL+A ++E+L+ +  LP  +  +    E+
Sbjct: 63  TVRSEWVISVTGTVRRRPPGTENPRMSTGEIELAASRLEVLNKSAPLPFDLDDDNLPDET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR+LDLRR  + +N+  R ++   +R  + A +FIE  TPIL  S+PEGARD+LVP
Sbjct: 123 VRLQYRYLDLRRPKMLRNLQLRHKVTKFIRDYLTARDFIEIETPILIKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+  G FYALPQ+PQQ KQLLM +G +RYFQIA CFRDED R+DR P EF QLD+EMSF
Sbjct: 183 SRLYPGHFYALPQSPQQLKQLLMVAGVERYFQIARCFRDEDLRADRQP-EFTQLDLEMSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V Q+DIL   E++   + EE ++   +   F RI Y+++  +YGTDKPD+R  + + +++
Sbjct: 242 VTQEDILQLTEDLFTSLTEELTDKKILYKPFKRISYEESWNKYGTDKPDIRYGMEISDIS 301

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   +++FRVF   L+       +A+P +     R   D +   ARS G  GL +     
Sbjct: 302 DIVANTDFRVFKDTLAAGGTVRGFAVP-EAASFTRRQLDDLTNLARSFGAKGLVWFAIDD 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PV K  +     AI  +L   +GD    +A   L+        R+H+A E
Sbjct: 361 LARGVEGVRSPVTKFFSDDQVVAIAHKLGANNGDLMLIVADKTLQALDVLGRLRSHMAHE 420

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+++ +   + +I+D P +EWNE+E + D  H+PFT P    E L  +D   ++A  YD
Sbjct: 421 LGLVDQDVIAYAFIVDPPLFEWNEDEGRWDPTHHPFTAPYPEDEPLLDSDPGKVRAMAYD 480

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +VCNG+E+ SG IR H  ++  + F  +  + E +E RFG L +AF+ G PPHGGIA GI
Sbjct: 481 IVCNGYELGSGSIRIHKRDLQAKIFEILNYTPEDIEQRFGPLLKAFEYGAPPHGGIAPGI 540

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISV 603
           DR+VM+L    N+REV  FP +Q   DL++ +PS V  EQLREL + +     +      
Sbjct: 541 DRLVMVLADEPNIREVIAFPKNQAGVDLMLNAPSPVDEEQLRELHIEVRLPEPESSTADS 600

Query: 604 T 604
            
Sbjct: 601 K 601


>gi|229081667|ref|ZP_04214162.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228701671|gb|EEL54162.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 591

 Score =  648 bits (1671), Expect = 0.0,   Method: Composition-based stats.
 Identities = 232/595 (38%), Positives = 345/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK  +  +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFSEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + + F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKYNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLSLKEEK 591


>gi|311694935|gb|ADP97808.1| aspartyl-tRNA synthetase [marine bacterium HP15]
          Length = 602

 Score =  648 bits (1671), Expect = 0.0,   Method: Composition-based stats.
 Identities = 230/595 (38%), Positives = 344/595 (57%), Gaps = 7/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  S +   V L GWVHR R HGG+IFLD+RD  G++QVV +PD+   F +A+
Sbjct: 2   RSHYCGGINESHIDQEVTLCGWVHRRRDHGGVIFLDLRDRDGMSQVVVDPDTPESFALAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V  R A T N N+ TGQ+EL  +++ IL+ A   P P+    +  E 
Sbjct: 62  KVRSEFVIKVTGRVRRRPAGTENNNMPTGQVELLGKELTILNAAATPPFPLDEHVDVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YRF+DLRR  +   +  R+R+ + +R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLRYRFVDLRRPEMINRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++GSF+ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQP-EFTQVDIEASF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ ++   E+++R +F++       S  F ++ Y +A++RYG+DKPDLR P+ + +V 
Sbjct: 241 IDEETLMKLNEDMIRALFKDVLEVELPS--FPQMPYAEAMQRYGSDKPDLRIPLELLDVN 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF+       G        KGG   R   D   ++    G  GLAYI    
Sbjct: 299 DLVEGVDFKVFAGPAKDPKGRVAALRVPKGGELTRKQIDDYTKFVGIYGAKGLAYIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K L      AI  R+  +DGD  FF A             R  I  +
Sbjct: 359 LSKGVEGLQSPIIKFLGDDVALAIMERVGAEDGDIVFFGADKTNVVNEALGALRIKIGHD 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++  + +   W++DFP +E   +   +   H+PFT P    E L   D  +  +  YD
Sbjct: 419 LDMLT-SEWAPLWVVDFPMFEETPD-GGLTAIHHPFTAPSCSPEDL-AADPANALSRAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  ++    F  +GI +E    +FG L  A + G PPHGG+A G+
Sbjct: 476 MVLNGTELGGGSIRIHDEKMQEAVFRILGIGEEEARAKFGFLLDALKFGCPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           DR+VML+ GA ++R+V  FP +Q+   L+  +P  V  +QLREL +R+ +  K +
Sbjct: 536 DRLVMLMTGASSIRDVIAFPKTQSATCLMTQAPGEVDEKQLRELHIRLRKPSKPV 590


>gi|206969547|ref|ZP_03230501.1| aspartyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|229180679|ref|ZP_04308019.1| Aspartyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|206735235|gb|EDZ52403.1| aspartyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228602824|gb|EEK60305.1| Aspartyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 591

 Score =  648 bits (1671), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 345/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R A  IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGAGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + + F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKYNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLSLKEEK 591


>gi|78355059|ref|YP_386508.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|97196665|sp|Q317R3|SYD_DESDG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78217464|gb|ABB36813.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 606

 Score =  648 bits (1671), Expect = 0.0,   Method: Composition-based stats.
 Identities = 246/594 (41%), Positives = 348/594 (58%), Gaps = 14/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT++CG+L  + +GS V L GWV   R HGG+IF+D+RD  G+TQVV +PD      E A
Sbjct: 24  RTNTCGELNANAIGSEVCLMGWVQFRRDHGGLIFIDLRDRSGLTQVVFSPDVSVDAHERA 83

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+VL + G V  R    +N N+ TG++E+   + ++L+ ++  P  V    E  E
Sbjct: 84  HVLRSEYVLAVRGTVRPRPEGMVNPNMKTGEVEVYVSEWKLLNTSKTPPFQVEDRVEASE 143

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YR+LDLRR  L +N   R R   ++R  +   NF+E  TP LT S+PEGARDFLV
Sbjct: 144 NLRLEYRYLDLRRPRLARNFQLRHRATQAIRNYLDQLNFLEVETPYLTKSTPEGARDFLV 203

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+NQG FYALPQ+PQ +KQLLM +G DRY+QI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 204 PSRMNQGEFYALPQSPQIFKQLLMVAGMDRYYQIVRCFRDEDLRADRQP-EFTQVDIEMS 262

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ + +  E ++  VF+E    + V+  F R+ YD AI  YG DKPD R  + + +V
Sbjct: 263 FVDEERVQSMAEGLMARVFKETLGID-VALPFPRMPYDQAIAEYGLDKPDTRFDLRLKDV 321

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+    S FR+F+K   V            G   +R   D   E+ +  G  GLA+I  +
Sbjct: 322 TDILRGSGFRLFAKAELVK-----AMRVPGGAVLSRKEIDDFTEFVKVYGAQGLAWIKIK 376

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            DE        P+AK L+     A+   L ++ GD  FF A  P    +     R  +A 
Sbjct: 377 EDE-----WQSPIAKFLSDDERAALTTELGLETGDIVFFQAASPDVVNNSLGYLRLKVAD 431

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
             G+I  N + F W+ DFP +E++ E+K+    H+PFT PQ G E L  +D    +A  Y
Sbjct: 432 RFGLIPENSYNFLWVTDFPLFEYSPEDKRYVACHHPFTAPQVGHEELMVSDPAKARARAY 491

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+  G IR H  E     F  +G   +  E +FG L +A + G PPHGGIA G
Sbjct: 492 DLVLNGNEVGGGSIRIHSREAQEHMFRALGFDPQEAEEQFGFLMQALELGAPPHGGIAFG 551

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR+VMLL G+ ++R+V  FP +Q    L+  +P  V+ +QLRELG+R+ E  +
Sbjct: 552 MDRLVMLLAGSASIRDVIAFPKTQKATCLMTHAPDQVAAKQLRELGIRLREKQE 605


>gi|254000153|ref|YP_003052216.1| aspartyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253986832|gb|ACT51689.1| aspartyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 594

 Score =  648 bits (1671), Expect = 0.0,   Method: Composition-based stats.
 Identities = 230/592 (38%), Positives = 358/592 (60%), Gaps = 5/592 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L    +G  V L GW HR R HGG+IF+D+RD  G+ Q+V +PD+   F++A+
Sbjct: 2   RTHYCGHLNREHIGQTVTLCGWAHRRRDHGGVIFIDLRDREGMAQIVIDPDTPEAFKLAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +VRSE+VL +   V +R   T+NANI TG++E+ A +IEIL+ +   P  +  +    E 
Sbjct: 62  TVRSEFVLKVVCKVRARPEGTVNANIPTGEVEMLATEIEILNPSLTPPFMLDDDNLS-EM 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R ++R++DLRR  + KN++ R R+  ++R  + +  FIE  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLEHRYIDLRRPAMQKNMMLRYRVAKTLRDHLDSNGFIEVETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHHGQFFALPQSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I+N +E+++R +F+   + + +   F R+ + +A+ +YG+DKPD+R  + +  +T
Sbjct: 240 LGEEEIMNIVEDMIRKMFKSVQDID-LPAQFPRMPFSEAMNKYGSDKPDMRVTLEITELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR- 362
           +     +F+VF+   ++  G         G   +R+  D   E+ +  G  GLAYI    
Sbjct: 299 DIMKDVDFKVFAGAANMVGGRVAAMRVPNGAAISRSEIDAYTEFVKIYGAKGLAYIKIND 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + +        P+ K++++   +AI  R   Q+GD  FF A             R  +  
Sbjct: 359 ITKLNEEGLQSPIVKNIHVNALQAIIDRTGAQNGDIVFFGADKAKVVNEALGALRTKVGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E G ++   +   W++DFP +E +EE  +    H+PFT P+ G E L   +  +  +  Y
Sbjct: 419 EKGHVDGRAWAPLWVVDFPMFEHDEEADRWVALHHPFTSPKDGHEDLLTTNPGAALSKAY 478

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  EV  + F  + ISKE  + +FG L  A Q G PPHGG+A G
Sbjct: 479 DMVLNGWEVGGGSVRIHKQEVQSKVFDALKISKEEAQEKFGFLLDALQYGAPPHGGLAFG 538

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+V L+ GA+++R+V  FP +Q    L+  +P+ V  +QLREL +R+ + 
Sbjct: 539 LDRLVTLMAGAESIRDVIAFPKTQRAQCLMTNAPNEVDEKQLRELHIRVRQQ 590


>gi|228960676|ref|ZP_04122320.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228798982|gb|EEM45955.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 591

 Score =  648 bits (1671), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 344/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAADCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 GD-----GLKGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDANRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAESQLEELNLKLSLKEEK 591


>gi|162148016|ref|YP_001602477.1| aspartyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786593|emb|CAP56175.1| Aspartyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 613

 Score =  648 bits (1671), Expect = 0.0,   Method: Composition-based stats.
 Identities = 317/605 (52%), Positives = 408/605 (67%), Gaps = 10/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTHSC  L  SD G   RLSGWVH  R HGG++F+D+RDH+G+TQ+V    S   E
Sbjct: 15  MHPYRTHSCAALRASDAGQTARLSGWVHSKRDHGGLLFIDLRDHFGMTQIVIPAGSPVLE 74

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR E VL I G V+ R A T N N+ TG+IEL AQ+++I S A+ LP  V G   Y
Sbjct: 75  AVERVRVESVLTITGEVVLRDAATKNPNLPTGEIELRAQQVDIQSSADVLPFQVAGHEHY 134

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R  YR++DLRRD +H+N++ R ++I S+R RM  + F+E  TPILTASSPEGARDF
Sbjct: 135 PEDLRLTYRYIDLRRDKVHRNMMLRAQVIASLRRRMTDQGFVEFQTPILTASSPEGARDF 194

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 195 LVPARMHPGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEAARADRSPGEFYQLDFE 254

Query: 241 MSFVEQDDILNTMENVLRGVFEEF-SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           M+F  Q+D+  T+E V+ GVF EF       +  F RI Y  A++ YG+DKPDLRNP+++
Sbjct: 255 MAFATQEDVFATLEPVMEGVFREFGGGRTVSAAPFERIPYATAMKLYGSDKPDLRNPLLL 314

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F +S F +F++I++        AIPA G G   RAF D++N WAR  G  GL Y
Sbjct: 315 SDVTESFANSGFGLFARIVADGGEVR--AIPAPGAGDRPRAFYDKLNAWAREAGAGGLGY 372

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  DE G     GP+AK+L      AIR    ++ GD+ FF AG   +   F+   R 
Sbjct: 373 IIF--DEEGG---KGPIAKNLEPARVAAIREATGLKAGDAVFFAAGKGDEVVKFSGLVRT 427

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA EL +I  + F FCWI DFP YE NEE  +IDF+HNPF+MPQGG+E+L G D L+I 
Sbjct: 428 RIATELDLIEQDSFRFCWITDFPMYERNEETGQIDFSHNPFSMPQGGLEALNGQDPLTIT 487

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH  +VM++AF   G     VE RFGG+  AF+ G PPHGG
Sbjct: 488 AYQYDIVCNGVELSSGAIRNHRPDVMIRAFELAGYPASEVEARFGGMLNAFRYGAPPHGG 547

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597
            A G+DRIVMLL    N+REV LFP++Q   DL+MG+P+ V  E+L+EL L + +  PK 
Sbjct: 548 SAPGVDRIVMLLADEPNIREVILFPLNQQGEDLMMGAPAPVPAERLKELSLALNLPRPKP 607

Query: 598 ILKIS 602
            +K  
Sbjct: 608 GVKAG 612


>gi|134298624|ref|YP_001112120.1| aspartyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|238685538|sp|A4J2J2|SYD_DESRM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|134051324|gb|ABO49295.1| aspartyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 600

 Score =  647 bits (1670), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/597 (39%), Positives = 342/597 (57%), Gaps = 11/597 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
           +RT  CG+L     G  V L GWV R R HGG+IF+D+RD  GI QVV +P  D   F+ 
Sbjct: 10  HRTLYCGELHKQHEGQEVTLMGWVQRRRDHGGLIFVDLRDRSGIVQVVFSPEVDQEAFKK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VL + G V  R   TIN N+ TG++E+ A  + +L+ A+  P  +    E  
Sbjct: 70  AEGVRNEYVLAVVGRVNGRPEGTINPNMATGEVEVYAHTLRLLNRAKTPPFYIEDNIEVD 129

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R +YR+LDLRR  +HK ++ R R   S+R  +    F+E  TP+LT S+PEGARD+L
Sbjct: 130 ENLRLRYRYLDLRRPEMHKAMMLRHRASKSIRDFLDQHGFLEIETPMLTKSTPEGARDYL 189

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ +KQ+LM +G +RYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 190 VPSRVNPGKFYALPQSPQLFKQILMLAGMERYFQIVRCFRDEDLRADRQP-EFTQIDLEM 248

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE +D++  ME ++  V  +       S    R+ Y +A+ R+G+DKPD R  + + +
Sbjct: 249 SFVEAEDVMGLMEQMIAEVCSDTIGVKI-STPIPRLSYQEAMDRFGSDKPDTRFGLELKD 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIF 360
           +T       F+VF+  ++     +   I AKG    +R   D +  +       GLAY  
Sbjct: 308 ITPIAAQCGFKVFNSTVAGGGQIK--GINAKGCASFSRKEIDDLTAFVAVYKAKGLAY-- 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           + ++E G+V     +AK        AI+ +++ Q GD   F+A  P    +     R H+
Sbjct: 364 FIINEDGSVK--SAIAKFFTEEEIAAIKDKMEAQPGDLLLFVADKPAVVAASLGALRVHL 421

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ L +I    + F W+ DFP  E++ E  +    H+PFT P      L  ++   ++A 
Sbjct: 422 AERLELIPQGMWNFLWVTDFPLLEYDSEAGRFFAMHHPFTSPAEEDLPLLESNPGKVRAR 481

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H  ++    F  +G+S+E  + +FG +  AF+ G PPHGG+A
Sbjct: 482 AYDMVLNGVEIGGGSIRIHRRDIQELMFKALGMSQEEAKEKFGFMLEAFEYGAPPHGGLA 541

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VMLL G  ++R+V  FP + +   L+  +P  V   QL EL +R     KK
Sbjct: 542 FGLDRLVMLLAGKDSIRDVIAFPKTASATCLMTQAPDVVDPAQLAELHIRSTAPVKK 598


>gi|229163351|ref|ZP_04291303.1| Aspartyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228620132|gb|EEK77006.1| Aspartyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 591

 Score =  647 bits (1670), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 344/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMTTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELSLKLSVKEEK 591


>gi|284048846|ref|YP_003399185.1| aspartyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283953067|gb|ADB47870.1| aspartyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 598

 Score =  647 bits (1670), Expect = 0.0,   Method: Composition-based stats.
 Identities = 232/593 (39%), Positives = 348/593 (58%), Gaps = 10/593 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M   R+H CGDL  +D G  V L GWV + R HGGIIF+D+RD +G+ QVV +P  D   
Sbjct: 1   MSMERSHHCGDLRKADAGKTVTLCGWVSKRRDHGGIIFIDLRDRHGLVQVVIDPAHDEKD 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F  A+ VRSE+VL + GLV  RSAET+N ++ TG++E+  + + +L+ ++  P  +    
Sbjct: 61  FHKAEGVRSEYVLQVRGLVRERSAETVNPHLPTGEVEVVVKDLNVLNPSKTPPFYIQDGI 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E++R +YR+LDLRR  + +N++ R ++  ++R  +  ++F+E  TP L  S+PEGAR
Sbjct: 121 DVDENVRLRYRYLDLRRPEMQQNLILRHQVTKAIRDFLDKQDFLEIETPDLIRSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G FYALPQ+PQ +KQLLM +G +RYFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DYLVPSRVNPGKFYALPQSPQLFKQLLMIAGMERYFQIARCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSFV+QDDI+   E ++  VF+E    +       R+ +D+A+ +YG+DKPDLR  + 
Sbjct: 240 MEMSFVDQDDIMALTEKLIAYVFKETLGVDVPVPM-ARMTWDEAMDKYGSDKPDLRFGMQ 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + N+      ++F+VF  I+      +   +        R   D + E+    G  GLA+
Sbjct: 299 LVNMNGALEGTQFKVFKDIIEKGGLVKAINVKGY-NKIPRRELDGLVEFVGIYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADAR 417
           I    D     +   P+AK  +    + I      + GD   F+    P    +     R
Sbjct: 358 IIVNDDG----SIKSPIAKFFSDEEMQRILEAGKAEKGDVLLFVADRKPQVVAAALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + + LG+I+ +   F W++ FP +E++EEE +    H+PFT P          D   +
Sbjct: 414 LEMGKRLGLIDPDKLCFTWVVKFPMFEYSEEEHRYVAMHHPFTAPCDEDVDKLLTDPGHV 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG EI  G  R H  ++  + F  +G++ E  + +FG L +AF+ G PPHG
Sbjct: 474 YAKAYDMVLNGVEIGGGSERIHREDIQKKVFEAIGLTDEQAQEKFGFLLKAFEFGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+A G+DR+VML+    ++R+V  FP SQ+  DL+  +P+ V  +QLREL +R
Sbjct: 534 GLAFGLDRLVMLMAKRPSIRDVIAFPKSQSAIDLMCQAPNVVDEKQLRELHIR 586


>gi|218234084|ref|YP_002369212.1| aspartyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228910238|ref|ZP_04074056.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228954687|ref|ZP_04116710.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229152606|ref|ZP_04280795.1| Aspartyl-tRNA synthetase [Bacillus cereus m1550]
 gi|301055911|ref|YP_003794122.1| aspartyl-tRNA synthetase [Bacillus anthracis CI]
 gi|226735101|sp|B7HE37|SYD_BACC4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218162041|gb|ACK62033.1| aspartate--tRNA ligase [Bacillus cereus B4264]
 gi|228630867|gb|EEK87507.1| Aspartyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228805014|gb|EEM51610.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228849402|gb|EEM94238.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|300378080|gb|ADK06984.1| aspartyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 591

 Score =  647 bits (1670), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 344/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLSLKEEK 591


>gi|229071911|ref|ZP_04205122.1| Aspartyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228711207|gb|EEL63171.1| Aspartyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 591

 Score =  647 bits (1670), Expect = 0.0,   Method: Composition-based stats.
 Identities = 232/595 (38%), Positives = 344/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + + F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKYNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLSLKEEK 591


>gi|251798351|ref|YP_003013082.1| aspartyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247545977|gb|ACT02996.1| aspartyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 600

 Score =  647 bits (1670), Expect = 0.0,   Method: Composition-based stats.
 Identities = 244/601 (40%), Positives = 353/601 (58%), Gaps = 10/601 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62
           +TH CG L  +++G  V L+GWV R R  GG++F+D+RD  GI Q V NPD +     IA
Sbjct: 4   KTHQCGTLTKANIGEEVTLNGWVQRRRDLGGVLFIDLRDRTGIVQTVFNPDFSGEALAIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              R+E+VL + G V+ R AET+N N+ TG+IE+   +IE+++ A+  P P+    E  E
Sbjct: 64  DRARNEFVLAVKGTVVERDAETVNKNLATGEIEIRVTEIEVINAAKTPPFPIEDGVEVDE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LDLRR  +HK ++ R++     R  +  E FI+  TPILT S+PEGARD+LV
Sbjct: 124 SLRLKYRYLDLRRPEMHKTLLLRSKAAKVFRDFLDGEGFIDVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G F+ALPQ+PQ +KQLLM  G +RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHEGEFFALPQSPQIFKQLLMVGGIERYYQIARCFRDEDLRADRQP-EFTQVDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD +L  ME ++  +F E      V     RI Y DA+ +YG+DKPDLR  + + ++
Sbjct: 243 FLTQDQLLGMMEQLIARLFRETIGVE-VELPIQRITYADAMNKYGSDKPDLRFGMEIEDI 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+    S+ +VF+ + +     + +     G   +R   D +  +A   G  GLA+I  +
Sbjct: 302 TDIVATSDVKVFASVAASGGVVKAFNAKGCG-HWSRKELDDLQPFAARYGGKGLAWITIK 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E       GP+ K L      A+  RL+++DGD   F A           + R  + +
Sbjct: 361 DGE-----WKGPIVKFLKPEEIAALTERLNVEDGDLLTFSADKAKVVADVLGNLRLKVGR 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+ + F+F W++DFP  EW+EE K+    H+PFT P+     L   D   I+A  Y
Sbjct: 416 ELGLIDDSKFKFVWVVDFPMLEWDEEAKRYVAVHHPFTRPKDEDLHLFDTDPGQIRAQAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R +  ++  + F  +G + E    +FG L  AF  G PPHGGIA G
Sbjct: 476 DIVLNGYEVGGGSMRIYKRDIQEKMFGALGFNMEEAHEKFGFLLDAFDYGTPPHGGIAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
            DR+VMLL G  N+RE   FP + +  DLL  +PS V + QL +L +R V  PK     +
Sbjct: 536 FDRLVMLLTGRTNLRETIAFPKTASATDLLCDAPSPVELSQLEQLHIRTVLKPKPEAAAA 595

Query: 603 V 603
            
Sbjct: 596 G 596


>gi|229192614|ref|ZP_04319575.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228590921|gb|EEK48779.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 591

 Score =  647 bits (1670), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 344/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRNLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLSLKEEK 591


>gi|47566591|ref|ZP_00237413.1| aspartyl-tRNA synthetase [Bacillus cereus G9241]
 gi|218899571|ref|YP_002447982.1| aspartyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228902930|ref|ZP_04067071.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228967478|ref|ZP_04128506.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|229158018|ref|ZP_04286089.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|226735100|sp|B7IIR4|SYD_BACC2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|47556621|gb|EAL14953.1| aspartyl-tRNA synthetase [Bacillus cereus G9241]
 gi|218544670|gb|ACK97064.1| aspartyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228625471|gb|EEK82227.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228792193|gb|EEM39767.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856714|gb|EEN01233.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 591

 Score =  647 bits (1670), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 344/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMTTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLSLKEEK 591


>gi|70732092|ref|YP_261848.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|97196806|sp|Q4K7D5|SYD_PSEF5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|68346391|gb|AAY93997.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 591

 Score =  647 bits (1669), Expect = 0.0,   Method: Composition-based stats.
 Identities = 239/593 (40%), Positives = 340/593 (57%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLEGQEVTLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRAETFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R A   NAN+ +G IE+   ++E+L+ AE  P P+    +  E 
Sbjct: 63  RVRSEYVVKITGKVRLRPAGAGNANMASGMIEVLGYELEVLNEAETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+R+  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRMTTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI+   E ++R +F+E          F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LDEKDIMGLTEGMIRNLFKEVLGLEFGE--FPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +             G    R   D   ++    G  GLAYI    
Sbjct: 300 DQLKEVEFKVFSGPANDPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K++   N   I  R+   DGD  FF A             R  +  +
Sbjct: 360 RAKGVEGLQSPIVKNIPEANLNVILDRVGAVDGDIVFFGADKAKIVSEALGALRIKLGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++ C  +   W++DFP +E N++       H+PFT P+   E L+ N   +  +  YD
Sbjct: 420 LNLLTCE-WAPMWVVDFPMFEENDD-GSFTALHHPFTAPKCSPEELEAN-PATALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GIS+   E +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGISEAEQEEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+   ++  +P  V  + LREL +R+ E PK
Sbjct: 537 DRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGLVDAKALRELHIRLREQPK 589


>gi|324328305|gb|ADY23565.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 591

 Score =  647 bits (1669), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 344/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMTTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLNVKEEK 591


>gi|229048112|ref|ZP_04193683.1| Aspartyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229129683|ref|ZP_04258651.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229146974|ref|ZP_04275336.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228636471|gb|EEK92939.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228653800|gb|EEL09670.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228723215|gb|EEL74589.1| Aspartyl-tRNA synthetase [Bacillus cereus AH676]
          Length = 591

 Score =  647 bits (1669), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 344/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAADCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLSLKEEK 591


>gi|71906274|ref|YP_283861.1| aspartyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|97196648|sp|Q47IE0|SYD_DECAR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71845895|gb|AAZ45391.1| aspartyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 599

 Score =  647 bits (1669), Expect = 0.0,   Method: Composition-based stats.
 Identities = 232/602 (38%), Positives = 342/602 (56%), Gaps = 6/602 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG L  +  G  V L GW HR R HGG+IF+D+RD  G+ QVV +PD    F+IA+
Sbjct: 2   RTHYCGQLNAALDGQIVTLCGWAHRRRDHGGVIFIDLRDREGLAQVVCDPDRADTFKIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+ L I G V  R A T NAN+ +G+IE+   +IE+L+ +   P     E    E+
Sbjct: 62  SVRNEFCLKITGKVRPRPAGTTNANLASGEIEILCHEIEVLNPSVTPPFQ-LDEDNLSEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R  +R +DLRR  +  N++ R +   + R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLLHRVIDLRRPQMQNNLMLRYKTSRAFRRFLDDNGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +G+DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGQFFALPQSPQLFKQLLMVAGYDRYYQIVKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I+   E ++R VF+E  + +     F R+ Y +A+ R+G+DKPDLR  + +  VT
Sbjct: 240 MSEAEIMALTEKLIRTVFKEAIDVDLPD--FPRMTYAEAMHRFGSDKPDLRVTLELTEVT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           + F    F+VF+ + +   G         G    R   D   ++    G  GLAYI    
Sbjct: 298 DAFKDVAFKVFAGVANSEGGRIAAMRIPGGATLTRGEIDAYTQFVGIYGAKGLAYIKVND 357

Query: 364 DESGNV-AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               N      P+ K+L+  + +A+  R   Q GD  FF A             R  I  
Sbjct: 358 ASQINETGLQSPIVKNLSEASLKAVIERTGAQSGDLIFFGADKAKIVNDALGALRIKIGH 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E G +    +   W++DFP +E+++E K+    H+PFT P+     L  +D     A  Y
Sbjct: 418 EKGFVTGAKWAPLWVIDFPMFEYDDESKRWTACHHPFTSPKDEHLDLLVSDPGKCLAKAY 477

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL  NG+E+  G +R H S+V  + FS + I  E  + +FG L  A + G PPHGG+A G
Sbjct: 478 DLALNGWELGGGSVRIHRSDVQEKVFSALNIGPEEQQAKFGFLLDALKYGAPPHGGLAFG 537

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           +DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+ +  +  +++ 
Sbjct: 538 LDRIVTMMTGAESIRDVIAFPKTQRAQCLLTDAPSGVDEKQLRELHIRLRQKVETQVEVG 597

Query: 603 VT 604
             
Sbjct: 598 QP 599


>gi|288940461|ref|YP_003442701.1| aspartyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288895833|gb|ADC61669.1| aspartyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 592

 Score =  647 bits (1669), Expect = 0.0,   Method: Composition-based stats.
 Identities = 241/591 (40%), Positives = 336/591 (56%), Gaps = 6/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CGDL     G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 2   RTQYCGDLNSQHTGQEVVLCGWVQRRRDHGGVIFIDLRDREGLVQVVFDPDRAEVFARAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
            VRSE+VL I G V  R   TIN ++ TG+IE+    +EIL+ AE  P+ +     +  E
Sbjct: 62  QVRSEYVLKITGRVRPRPEGTINPDLSTGEIEILGLDLEILNAAETPPIQLDSHAADASE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLRR  +   +  R+R+  +MR  +    F++  TPILT S+PEGARD+LV
Sbjct: 122 ELRLRYRYLDLRRPEMQARLRTRSRVTQAMRRFLDERGFLDIETPILTKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + G F+ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD+E+S
Sbjct: 182 PSRTHPGEFFALPQSPQLFKQLLMMSGLDRYYQIARCFRDEDLRADRQP-EFTQLDIEVS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +D+++  ME ++R +F E      + + F R+ Y +A+RR+G+D+PDLR P+ + +V
Sbjct: 241 FMSEDELMGLMEGMIRSLFSEVIGVE-LPDPFPRLTYAEAMRRFGSDRPDLRVPLELIDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     +F+VF+       G  V     KGG  +R   D   ++    G  GLAYI   
Sbjct: 300 ADLMDGVDFQVFAGPAKDPEGRVVALRLPKGGELSRKEIDGYTQFVGIYGAKGLAYIKVN 359

Query: 363 L-DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+ K L     E I  R    DGD  FF A             R  + 
Sbjct: 360 EWAAKGREGLQSPILKFLPDATVEGIMARTGAVDGDLIFFGADKARVVNESIGALRVKLG 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           Q+ G++    +   W++DFP +E +    +    H+PFT P+     L  +D  +  +  
Sbjct: 420 QDRGLL-EGEWRPLWVVDFPMFEHDPANGRWVALHHPFTAPKDEHLGLLESDPGACLSRA 478

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H   V  Q F  + IS E  E RFG L +A + G PPHGG+A 
Sbjct: 479 YDMVLNGTELGGGSIRIHRDAVQRQVFKLLNISDEQAEERFGFLLKALRFGCPPHGGLAF 538

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+VML+ GA ++R+V  FP +Q    LL  +PSTV   QL+EL LR+ 
Sbjct: 539 GLDRLVMLMTGAGSIRDVMAFPKTQTAACLLTDAPSTVDEAQLKELSLRLR 589


>gi|227817181|ref|YP_002817190.1| aspartyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|254781714|sp|C3L608|SYD_BACAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|227007021|gb|ACP16764.1| aspartate--tRNA ligase [Bacillus anthracis str. CDC 684]
          Length = 591

 Score =  647 bits (1669), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 345/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVSVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   ++  L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDASVLKNTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLNVKEEK 591


>gi|227824345|ref|ZP_03989177.1| aspartyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904844|gb|EEH90762.1| aspartyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 596

 Score =  647 bits (1668), Expect = 0.0,   Method: Composition-based stats.
 Identities = 230/602 (38%), Positives = 353/602 (58%), Gaps = 12/602 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M   R+H CG+L   D G  V L GWV + R HGGIIF+D+RD  G+ QVV +P  D   
Sbjct: 1   MSFERSHHCGELRKQDAGKEVTLCGWVSKRRDHGGIIFIDLRDRSGLVQVVIDPAHDDKD 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F  A++VRSE+VL + G+V +R+ ET+N N+ TG++E+  + + IL+ A+  P  +    
Sbjct: 61  FHKAETVRSEFVLQVKGMVRNRTEETVNPNLPTGEVEVVVEGLNILNPAKTPPFYIQDGV 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E++R +YR+LDLRR  + +N++ R ++   +R  M  + F+E  TP+L  S+PEGAR
Sbjct: 121 DVDENVRLRYRYLDLRRPEMQRNLILRHKVTKLVRDFMDNQGFLEIETPMLCKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G FYALPQ+PQ +KQ+LM +G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DYLVPSRVNPGKFYALPQSPQLFKQILMVAGMEKYFQIARCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+++DDI+   EN++  VF+       +   F R+ +DDA+ +YG+DKPDLR  + 
Sbjct: 240 MEMSFIDEDDIMTLTENLIAYVFKNALGKE-LQVPFGRMTWDDAMDQYGSDKPDLRFGMK 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + N+ +    ++F+VF  I+      +   +        R   D + ++    G  GLA+
Sbjct: 299 LVNMNQALEGTQFKVFKDIIEKGGLVKAINVKGY-SAIPRRELDGLVDFVGIYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADAR 417
           I    D     +   P+AK  +    + I      + GD   F+A   PL   +     R
Sbjct: 358 IIVNEDG----SIKSPIAKFFSEEEMKRILETGKAEKGDVLLFVADKNPLVVAAALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + + L +I+ +   F W++ FP +E++EEE +    H+PFT P          D   +
Sbjct: 414 LEMGKRLNLIDPDKLAFTWVVKFPMFEYSEEEHRYVAMHHPFTSPCDEDVDKLLTDPGHV 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG EI  G IR H   V  + F  +G++ E  + +FG L  AF+ G PPHG
Sbjct: 474 YAKAYDMVLNGVEIGGGSIRIHDRTVQNKVFEAIGLTDEQAQEKFGFLLNAFEFGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR--IVENP 595
           G+A G+DR++ML+    ++R+V  FP +Q+  D++  +P+ V  +Q+REL +R  +V+  
Sbjct: 534 GLAFGLDRLIMLMAKRPSIRDVIAFPKTQSAVDVMSQAPNIVDEKQMRELHIRSTVVKKE 593

Query: 596 KK 597
           K+
Sbjct: 594 KE 595


>gi|103487236|ref|YP_616797.1| aspartyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98977313|gb|ABF53464.1| aspartyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 619

 Score =  647 bits (1668), Expect = 0.0,   Method: Composition-based stats.
 Identities = 324/598 (54%), Positives = 417/598 (69%), Gaps = 8/598 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH CG L    VG  VRLSGWVHR R HGG++F+D+RDHYG+TQ+V +   A F 
Sbjct: 27  MHAYRTHHCGQLRAEHVGQTVRLSGWVHRKRDHGGLLFVDLRDHYGLTQIVVDSSDAAFA 86

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +R+E V+ I G V++RSAET+NAN+ TG IE+ A+++ + S A ELP+PV GE+EY
Sbjct: 87  TLDGLRAESVVTITGDVVARSAETVNANLPTGAIEVRAREVAVQSAAAELPMPVAGEQEY 146

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRFLDLRR+ LH NI+ R+ +I S+R RM+ + F E  TPILTASSPEGARD+
Sbjct: 147 PEDIRLKYRFLDLRRERLHANIMLRSNVIASLRRRMVEQGFTEYQTPILTASSPEGARDY 206

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQ +KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 207 LVPSRVHPGKFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 266

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN--TVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV QDD+ N +E VL GVFEEF+NG   T + +F RI Y +++ +YG DKPDLRNP+I
Sbjct: 267 MSFVTQDDVFNAIEPVLAGVFEEFANGKSVTPAGSFPRIPYRESMLKYGNDKPDLRNPLI 326

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V+ HF  S F  F+ I++          PA     +R F D MN WA+ +G  GL Y
Sbjct: 327 ISDVSAHFTGSGFGRFADIVAAGDVVRAIPAPATADK-SRKFFDDMNSWAQGEGFAGLGY 385

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
              +  E G     GP+AK+      +A+   L +   D  FF AG   +    A  AR 
Sbjct: 386 ATRKGGEWG-----GPIAKNHGAEKMDALAADLGLGPDDGLFFAAGREAQAAKLAGLART 440

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A++LG+I+ N FE CWI+DFP +E +EE  KIDF+HNPF+MPQG +E+L+  D L I 
Sbjct: 441 RVAEQLGLIDPNRFEMCWIVDFPMFERDEETGKIDFSHNPFSMPQGELEALETKDPLDIL 500

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH  ++M +AF   G S+  V+  F G+  AF+ G PPHGG
Sbjct: 501 AWQYDIVCNGVELSSGAIRNHRPDIMYKAFEIAGYSQAEVDANFAGMINAFKYGAPPHGG 560

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            A G+DRIVMLL    N+REV +FPM+Q   DL+MG+P+ VS +QLRELG+RIV+ PK
Sbjct: 561 SAPGVDRIVMLLADEPNIREVVVFPMNQKAEDLMMGAPAPVSEKQLRELGIRIVDGPK 618


>gi|254785044|ref|YP_003072472.1| aspartyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|259511871|sp|C5BPP4|SYD_TERTT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|237684225|gb|ACR11489.1| aspartate--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 600

 Score =  647 bits (1668), Expect = 0.0,   Method: Composition-based stats.
 Identities = 223/603 (36%), Positives = 342/603 (56%), Gaps = 7/603 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CG L  +++G  V L GWV R R HGG+IF+D+RD  GI QVV +PD    F +A 
Sbjct: 2   RSVYCGVLTAANIGEEVTLCGWVDRRRDHGGVIFVDLRDRDGIVQVVFDPDAEDNFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR E+VL + G V +RS  T+NAN+ TG++E+    + IL+ A+  P  +       E 
Sbjct: 62  KVRPEYVLQVTGKVRARSESTVNANMATGEVEIYGTGLTILNTADTPPFQLDSFTSVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR+LDLRR  +  N+  R+++ N++R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLRYRYLDLRRKEMQHNLRFRSKVTNAIRNYLDEHGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++  F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHESKFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ I++  E ++R +F +  + +    +F R+ Y +A+ +YG+DKPD+R P+ M  + 
Sbjct: 241 MDEEQIMSVTEGMIRKLFNDVLSID--LGDFPRMPYSEAMEKYGSDKPDMRIPLEMVEIK 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +            +GG   R   D   ++    G  GLAYI    
Sbjct: 299 DLMKDVEFKVFSAPANDPKSRVTAMRVPQGGEIPRKKIDAYTKFVSIYGAKGLAYIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            +        P+ K L     +AI  R+  ++GD  FF A             R  + ++
Sbjct: 359 KDDLENGLQSPIVKFLPAEVCKAILERVGAENGDLIFFGADTTKVVTEALGALRCKLGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +  C  +   W++DFP +E   +E  +   H+PFT P    E L+ N   +  +  YD
Sbjct: 419 LDLYTCE-WAPLWVVDFPMFE-ETDEGGLTALHHPFTAPSCSPEDLQAN-PATALSRAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  ++    F  +GIS E    +FG L  A + G PPHGG+A G+
Sbjct: 476 MVLNGTELGGGSVRIHNQDMQQAVFKILGISPEEQREKFGFLLDALKFGAPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISV 603
           DR++ML+ GA ++R+V  FP +Q+   L+  +P  V  +QL+EL +R+   P+     + 
Sbjct: 536 DRLIMLMTGADSIRDVIAFPKTQSAACLMTDAPGAVDAKQLQELHIRLRAKPQAAKDEAG 595

Query: 604 TTI 606
              
Sbjct: 596 KEE 598


>gi|229111875|ref|ZP_04241421.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|296504895|ref|YP_003666595.1| aspartyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|228671631|gb|EEL26929.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|296325947|gb|ADH08875.1| aspartyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 591

 Score =  647 bits (1668), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 344/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAADCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAESQLEELNLKLSLKEEK 591


>gi|228987654|ref|ZP_04147768.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228772114|gb|EEM20566.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 591

 Score =  647 bits (1668), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 344/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMTTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLSLKEEK 591


>gi|209542632|ref|YP_002274861.1| aspartyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530309|gb|ACI50246.1| aspartyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 599

 Score =  647 bits (1668), Expect = 0.0,   Method: Composition-based stats.
 Identities = 317/605 (52%), Positives = 408/605 (67%), Gaps = 10/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTHSC  L  SD G   RLSGWVH  R HGG++F+D+RDH+G+TQ+V    S   E
Sbjct: 1   MHPYRTHSCAALRASDAGQTARLSGWVHSKRDHGGLLFIDLRDHFGMTQIVIPAGSPVLE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR E VL I G V+ R A T N N+ TG+IEL AQ+++I S A+ LP  V G   Y
Sbjct: 61  AVERVRVESVLTITGEVVLRDAATKNPNLPTGEIELRAQQVDIQSSADVLPFQVAGHEHY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R  YR++DLRRD +H+N++ R ++I S+R RM  + F+E  TPILTASSPEGARDF
Sbjct: 121 PEDLRLTYRYIDLRRDKVHRNMMLRAQVIASLRRRMTDQGFVEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPARMHPGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEAARADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEF-SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           M+F  Q+D+  T+E V+ GVF EF       +  F RI Y  A++ YG+DKPDLRNP+++
Sbjct: 241 MAFATQEDVFATLEPVMEGVFREFGGGRTVSAAPFERIPYATAMKLYGSDKPDLRNPLLL 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F +S F +F++I++        AIPA G G   RAF D++N WAR  G  GL Y
Sbjct: 301 SDVTESFANSGFGLFARIVADGGEVR--AIPAPGAGDRPRAFYDKLNAWAREAGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  DE G     GP+AK+L      AIR    ++ GD+ FF AG   +   F+   R 
Sbjct: 359 IIF--DEEGG---KGPIAKNLEPARVAAIREATGLKAGDAVFFAAGKGDEVVKFSGLVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA EL +I  + F FCWI DFP YE NEE  +IDF+HNPF+MPQGG+E+L G D L+I 
Sbjct: 414 RIATELDLIEQDSFRFCWITDFPMYERNEETGQIDFSHNPFSMPQGGLEALNGQDPLTIT 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH  +VM++AF   G     VE RFGG+  AF+ G PPHGG
Sbjct: 474 AYQYDIVCNGVELSSGAIRNHRPDVMIRAFELAGYPASEVEARFGGMLNAFRYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597
            A G+DRIVMLL    N+REV LFP++Q   DL+MG+P+ V  E+L+EL L + +  PK 
Sbjct: 534 SAPGVDRIVMLLADEPNIREVILFPLNQQGEDLMMGAPAPVPAERLKELSLALNLPRPKP 593

Query: 598 ILKIS 602
            +K  
Sbjct: 594 GVKAG 598


>gi|49481703|ref|YP_038453.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|118479560|ref|YP_896711.1| aspartyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196034397|ref|ZP_03101806.1| aspartyl-tRNA synthetase [Bacillus cereus W]
 gi|196044917|ref|ZP_03112151.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218905597|ref|YP_002453431.1| aspartyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225866384|ref|YP_002751762.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|228948116|ref|ZP_04110400.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229123943|ref|ZP_04253135.1| Aspartyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229186642|ref|ZP_04313803.1| Aspartyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|62287558|sp|Q6HDC3|SYD_BACHK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225319|sp|A0RJ11|SYD_BACAH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226735099|sp|B7JPY8|SYD_BACC0 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781715|sp|C1ESU7|SYD_BACC3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|49333259|gb|AAT63905.1| aspartate--tRNA ligase (aspartyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|118418785|gb|ABK87204.1| aspartyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|195992939|gb|EDX56898.1| aspartyl-tRNA synthetase [Bacillus cereus W]
 gi|196024405|gb|EDX63078.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218535605|gb|ACK88003.1| aspartyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225786714|gb|ACO26931.1| aspartate--tRNA ligase [Bacillus cereus 03BB102]
 gi|228596901|gb|EEK54560.1| Aspartyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228659245|gb|EEL14893.1| Aspartyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228811474|gb|EEM57811.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 591

 Score =  647 bits (1668), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 344/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLNVKEEK 591


>gi|83858510|ref|ZP_00952032.1| aspartyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83853333|gb|EAP91185.1| aspartyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 605

 Score =  647 bits (1668), Expect = 0.0,   Method: Composition-based stats.
 Identities = 339/604 (56%), Positives = 440/604 (72%), Gaps = 9/604 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L  + +G   RLSGW+HR R HGG++F+D+RDHYG+TQ V  PD+  F 
Sbjct: 1   MHAYRTHTCGQLRKAQMGETARLSGWIHRKRDHGGLLFVDLRDHYGLTQCVLEPDNPNFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R+E V+ + G V++R+ +TIN N+ TG+IEL  + + + S AEELPLPVFGE ++
Sbjct: 61  TLERMRAESVVTVTGKVVARTEDTINPNLPTGEIELLVEDLVVQSAAEELPLPVFGEPDW 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R K+R++DLRR++LHK IV R++II+S+R RM+ E F E  TPILTASSPEGARDF
Sbjct: 121 SEEVRLKHRYIDLRRESLHKRIVLRSKIIDSLRRRMVDEGFTEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFDRYFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 181 LVPSRLHPGHFYALPQAPQQFKQLIMVSGFDRYFQIAPCFRDEDARADRAPGEFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSN-GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV QD++   +E VL GVF EF++        F RI Y +A+R+YG+DKPDLRNPI M
Sbjct: 241 MSFVTQDEVFGVIEPVLAGVFNEFADGREVPEGAFPRIPYAEAMRKYGSDKPDLRNPIEM 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             VTEHF  S F+VF+ ++  NP  EVWAIPA  GG +RAFCDRMN WA+ +GQPGL YI
Sbjct: 301 EAVTEHFAGSGFKVFAGMIEKNPKVEVWAIPAPKGG-SRAFCDRMNSWAQKEGQPGLGYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FWR +E+G + G GP+AK++    T+AIR +L ++ GD+ FF AG+P  F SFA  AR+ 
Sbjct: 360 FWR-EENGALEGAGPIAKNIGPERTDAIRTQLGLEAGDAVFFAAGEPSAFASFAGKARDV 418

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG------ND 473
           + +EL +   N F FCWI+DFP YEW++E KK++F+HNPF+MPQ   E+           
Sbjct: 419 VGRELDLFEKNVFRFCWIVDFPMYEWDDENKKVEFSHNPFSMPQMDPEAFMALSKDDHET 478

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           LL +KA+QYD+VCNG E++SG IRNH  +VML+AF   G   +VVE  FGG+  AF+ G 
Sbjct: 479 LLGLKAWQYDIVCNGIELSSGAIRNHRPDVMLKAFEFAGYGADVVEEAFGGMLNAFRYGA 538

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DRIVM+L   +N+REV +FP  Q   DL+M +P+   + QLREL LR V 
Sbjct: 539 PPHGGIAPGVDRIVMMLADQENLREVVMFPKDQQARDLMMNAPAPAEMRQLRELHLRTVV 598

Query: 594 NPKK 597
              K
Sbjct: 599 PEAK 602


>gi|52141106|ref|YP_085724.1| aspartyl-tRNA synthetase [Bacillus cereus E33L]
 gi|62287538|sp|Q634E3|SYD_BACCZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|51974575|gb|AAU16125.1| aspartate--tRNA ligase (aspartyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 591

 Score =  647 bits (1668), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 344/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEDAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLSLKEEK 591


>gi|114569808|ref|YP_756488.1| aspartyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|122316203|sp|Q0AQ87|SYD_MARMM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|114340270|gb|ABI65550.1| aspartyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 605

 Score =  647 bits (1668), Expect = 0.0,   Method: Composition-based stats.
 Identities = 334/606 (55%), Positives = 445/606 (73%), Gaps = 11/606 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  + VG   R+SGW+HR R HGG++F+D+RDHYG+TQVV  P+S  F 
Sbjct: 1   MHAYRSHTCAELRKAHVGQTARISGWIHRKRDHGGLLFIDLRDHYGLTQVVLEPESPHFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R E V+ + G V++RS ET+NAN+ TG+IE+   ++ I S AEELPLPVFGE ++
Sbjct: 61  TLERLRVESVITVTGEVIARSDETVNANLPTGEIEVRLAELAIQSEAEELPLPVFGEPDW 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R K+R++DLRR++LHK IV R++II+S+R RM+ ENF+E  TPILTASSPEGARDF
Sbjct: 121 SEEVRLKHRYIDLRRESLHKRIVLRSKIIDSLRRRMVDENFVEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQQ+KQL+M SGFDRYFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 181 LVPSRVHPGKFYALPQAPQQFKQLIMVSGFDRYFQIAPCFRDEDARADRAPGEFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSN-GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSF  Q D+ + +E V++G+F+EF++        F++I Y DA+  YG+DKPDLRNPI M
Sbjct: 241 MSFATQQDVFDVIEPVMKGLFDEFADGRTVPDEPFVQIAYKDAMSWYGSDKPDLRNPIKM 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            + +E F  S F+VF+ +L  NP  +VWAIPAK GG +RAFCDRMN WA+ +GQPG+ YI
Sbjct: 301 SDASETFRGSGFKVFAGMLERNPKVQVWAIPAKTGG-SRAFCDRMNSWAQKEGQPGMGYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FWR  E G +   GP+AK++    TEA+RV L ++ GD+CFF AGDP +F  FA  AR+ 
Sbjct: 360 FWREAEGG-LEAAGPIAKNIGEERTEALRVELGLEAGDACFFAAGDPREFAGFAGRARDV 418

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND------ 473
           +  EL +   + F FCWI+DFP YEW+E+ KKIDF+HNPF+MPQ   +     D      
Sbjct: 419 VGAELDLCEKDTFRFCWIVDFPMYEWDEDNKKIDFSHNPFSMPQIDPDDFLKLDADTDAD 478

Query: 474 -LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            LL++KA+QYD+VCNG E++SG +RNH  +VML+AF+  G     VE  FGG+  AF+ G
Sbjct: 479 TLLALKAYQYDIVCNGVELSSGAVRNHRPDVMLKAFAFAGYDAATVEEEFGGMLNAFRYG 538

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR-I 591
            PPH G+A G+DR++MLL G +N+REV +FP  Q   DL+M +P+ V ++QLREL +R +
Sbjct: 539 APPHAGVAPGVDRMIMLLAGVENLREVVMFPKDQQARDLMMNAPAEVELKQLRELHIRTV 598

Query: 592 VENPKK 597
           V + KK
Sbjct: 599 VPDAKK 604


>gi|228917036|ref|ZP_04080596.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228929447|ref|ZP_04092468.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229093473|ref|ZP_04224576.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228689944|gb|EEL43748.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228830235|gb|EEM75851.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842643|gb|EEM87731.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 591

 Score =  646 bits (1667), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 344/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDASVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLNVKEEK 591


>gi|229098874|ref|ZP_04229810.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229105037|ref|ZP_04235690.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|229117899|ref|ZP_04247261.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228665556|gb|EEL21036.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228678376|gb|EEL32600.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228684547|gb|EEL38489.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 591

 Score =  646 bits (1667), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 347/595 (58%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A ++ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATRVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E+F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEDFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAADCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     + +A+   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDAKALMSTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLSLKEEK 591


>gi|325982635|ref|YP_004295037.1| aspartyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325532154|gb|ADZ26875.1| aspartyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 595

 Score =  646 bits (1667), Expect = 0.0,   Method: Composition-based stats.
 Identities = 230/594 (38%), Positives = 342/594 (57%), Gaps = 5/594 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT+ CG +    +   V L GWVHR R HGG+IF+D+RD  G+ QVV +PD+   F+ A+
Sbjct: 2   RTNYCGAINTEYLDKTVTLFGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDNVETFQTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+VL I G V  R   TIN ++++G+IE+    IE+L+ +   P  +  +    E 
Sbjct: 62  KIRNEYVLKITGRVRRRPEGTINTSLVSGEIEILVAAIEVLNASLTPPFLMDDD-NISEV 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R ++R+LDLRR  +  N+  R ++  ++R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLEHRYLDLRRPAMQSNLRLRHKVAMAVRVFLDQHGFLDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVNAGHFFALPQSPQLFKQLLMVSGFDRYYQITRCFRDEDLRADRQP-EFTQIDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I++ ME ++RG+F+  SN + + N F R+ Y +A+ +YG+DKPDLR P+    +T
Sbjct: 240 LSENEIMSLMEEMIRGLFKNVSNVD-LPNPFPRLTYAEAMFKYGSDKPDLRIPLEFTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +      F+VF +      G         GG  +R   D    +    G  GLAYI    
Sbjct: 299 DIMKEVPFKVFREAAEKPDGRVAALRVPNGGELSRKEIDDYTAFVAIYGAKGLAYIKVNC 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K L     + +  R   +DGD  FF A             R  +   
Sbjct: 359 LSEGLEGLQSPILKFLPESTIQTVLARTRARDGDLIFFGADKAKIVNESLGALRIKVGHR 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G      ++  W++DFP +E +EEE +    H+PFT P  G E L   D     +  YD
Sbjct: 419 HGHAEAE-WKPLWVVDFPMFERDEEENRWQALHHPFTSPADGHEDLLETDPGQALSKAYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G +R H  +V  + F  + IS++  + +FG L +A Q G PPHGGIA G+
Sbjct: 478 MVLNGSEIGGGSVRIHRQDVQSKVFRALNISEQEAQEKFGFLLQALQYGAPPHGGIAFGL 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DRI+ ++ G++++R+V  FP +Q    LL  +PSTV  +QL+EL +R+ +   K
Sbjct: 538 DRILTMMTGSESIRDVIAFPKTQRAQCLLTHAPSTVDEKQLKELNIRLRQVDTK 591


>gi|229076031|ref|ZP_04209002.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228707065|gb|EEL59267.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 591

 Score =  646 bits (1667), Expect = 0.0,   Method: Composition-based stats.
 Identities = 234/595 (39%), Positives = 348/595 (58%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A ++ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATRVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E+F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEDFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E  V   F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAVDCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     + +A+   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDAKALMSTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLSLKEEK 591


>gi|197119275|ref|YP_002139702.1| aspartyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|238690895|sp|B5EIV1|SYD_GEOBB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|197088635|gb|ACH39906.1| aspartyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 593

 Score =  646 bits (1667), Expect = 0.0,   Method: Composition-based stats.
 Identities = 240/593 (40%), Positives = 346/593 (58%), Gaps = 10/593 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
            R+  CG+L    +G  V L GWV + R HGG+IF+D+RD  GI+Q+V +P+      AK
Sbjct: 9   KRSSYCGELRGGHIGQEVTLMGWVSKRRDHGGLIFVDLRDRDGISQIVFDPERCPEAHAK 68

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             S R+E+VL I G V +R   T+N  + TG+IE+   + ++L+ ++ LP  + G  +  
Sbjct: 69  AESARNEYVLAIRGTVAARPEGTVNPKMKTGEIEVLVTECKLLNPSKALPFTLDGFVDVN 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLR  TL +N++ R+++    R  +    FIE  TP LT S+PEGARDFL
Sbjct: 129 ENIRLKYRYLDLRTGTLQQNLMLRSKVAQLTRSYLSDNGFIELETPFLTKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N+G FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 189 VPSRINKGEFYALPQSPQLFKQILMVSGFDRYFQIVRCFRDEDLRADRQP-EFTQIDCEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++++DI+  ME ++  +F E      V     R+ Y +AIRR+G D PDLR  + +  
Sbjct: 248 SFIDREDIITVMEGLMARIFTEARGVK-VELPIERMTYQEAIRRFGVDNPDLRFGLELVE 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++   +S F+VF+ +++     +   +    G  +R   D + E+A+  G  GLAY+  
Sbjct: 307 LSDIVKNSGFKVFADVVNGGGIVKGMNVK-GAGAMSRKEIDDLTEFAKIYGAKGLAYVKM 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                       P+AK         +    D ++GD   F+A  P          RNH+A
Sbjct: 366 TA-----EGWQSPIAKFFTPEEIATMDKAFDAKEGDLLLFVADKPKVVNDSLGKLRNHLA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            ++G+ + N F F WI DFP  EW+EE K+    H+PFT P         +D    +A  
Sbjct: 421 AKMGLTDPNVFRFVWITDFPLLEWDEEAKRWAAVHHPFTAPMDEDLQYVESDPGRCRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  EV    F  +G+S+E   ++FG L  A + G PPHGGIA 
Sbjct: 481 YDLVLNGNEIGGGSIRIHQEEVQSLMFKMLGLSEENARSKFGFLLDALEYGTPPHGGIAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR++ML+ G+ ++R+V  FP +Q    L+  +PS V   QLRELG+R+   
Sbjct: 541 GLDRLMMLITGSDSIRDVIAFPKTQKGACLMSDAPSGVDALQLRELGIRLAAK 593


>gi|228941571|ref|ZP_04104119.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228974500|ref|ZP_04135067.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981094|ref|ZP_04141395.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228778635|gb|EEM26901.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785217|gb|EEM33229.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818078|gb|EEM64155.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942184|gb|AEA18080.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 591

 Score =  646 bits (1667), Expect = 0.0,   Method: Composition-based stats.
 Identities = 234/595 (39%), Positives = 343/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL I+G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHIEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL  ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILEMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLSLKEEK 591


>gi|152996209|ref|YP_001341044.1| aspartyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189082103|sp|A6VXD0|SYD_MARMS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150837133|gb|ABR71109.1| aspartyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 590

 Score =  646 bits (1667), Expect = 0.0,   Method: Composition-based stats.
 Identities = 235/591 (39%), Positives = 346/591 (58%), Gaps = 7/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG+L  S++   + L GWVHR R HGG+IFLD+RD  GITQVV +PD    F +A 
Sbjct: 2   RSHYCGELNASNISQEITLCGWVHRRRDHGGVIFLDVRDREGITQVVFDPDRAESFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+V+ + GLV +R   T+N N+ TG+IE+   ++EIL+ A+  P  +   +   E 
Sbjct: 62  SVRNEFVVKLKGLVRARPEGTVNPNMNTGEIEVLGTELEILNAAKTPPFQLDEHQSVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K RF+DLRR  + + +  R+++ + +R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKNRFIDLRRPEIQQKMRFRSKVTSVLRRYLDGNGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  QGSF+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTQQGSFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I+   E ++ G+F+E  + +     F R+ Y +A+  YG+DKPDLR P+ +  V+
Sbjct: 241 MSEQEIMAMTEEMIVGLFKELMDID--LGTFPRMPYSEAMETYGSDKPDLRIPLTIVTVS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D   ++    G  GLAYI    
Sbjct: 299 DLMAGVDFKVFSGPATDPKGRVAALKVPGGNALTRKQIDDYTKFVSIYGAKGLAYIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +       P+ K L +    A+  RL+ +DGD  FF A             R  +  +
Sbjct: 359 KSNLEEGLQSPIVKFLPVEVRAALLERLEAEDGDLIFFGADSAKIVNEALGALRCKLGDD 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +  C  +   W++DFP +E   +   I   H+PFT P    E+LK +  L+  +  YD
Sbjct: 419 LNLYTCK-WAPLWVVDFPMFEETSD-GGITAIHHPFTAPSCSPENLKAS-PLTALSQAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H S +    F  + I+KE  E +FG L  A + G PPHGG+A G+
Sbjct: 476 MVLNGTELGGGSIRIHQSSMQETVFELLNITKEEQEEKFGFLLDALKFGAPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR+VML+ G+ ++R+V  FP +Q+   LL  +P  VS +QL+EL +RI + 
Sbjct: 536 DRLVMLMTGSSSIRDVIAFPKTQSATCLLTQAPGEVSEKQLKELNIRIRKP 586


>gi|315645806|ref|ZP_07898927.1| aspartyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315278567|gb|EFU41881.1| aspartyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 591

 Score =  646 bits (1667), Expect = 0.0,   Method: Composition-based stats.
 Identities = 240/595 (40%), Positives = 350/595 (58%), Gaps = 10/595 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-- 60
             RTH CG L  + +G  V L+GWV   R  GG++F+D+RD  GI Q+V NPD +     
Sbjct: 1   MKRTHQCGHLTTAHIGENVTLNGWVQTRRDLGGVLFIDLRDRSGIMQIVFNPDFSGEALA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  VRSE+VL + G V+ R  ET N N+ TG+IE+    IE+L+ A+  P  +    E 
Sbjct: 61  VADKVRSEFVLAVSGKVVKRDPETFNPNLPTGEIEVQVTNIEVLNAAKTPPFFIEDGVEV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + K ++ R++     R  +  E F++  TPILT S+PEGARD+
Sbjct: 121 DEQLRLKYRYLDLRRPEMQKTLMLRSKASKIFRDFLDGEGFVDVETPILTKSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G F+ALPQ+PQ YKQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRVHPGEFFALPQSPQIYKQLLMVSGIERYYQIARCFRDEDLRADRQP-EFTQVDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+E+DD+L  ME ++  +F+E +    ++  F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 240 TSFLERDDLLTMMEQLMVKLFKETAGVE-LATPFQRISHAEAMSKYGSDKPDLRFGLELI 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + +    S  +VFS ++      +       G    R   D +  +A   G  GLA+I 
Sbjct: 299 EMNDIVTSSGVKVFSSVIEKGGEVKCLNAKGCGT-WTRKEIDDLGPYAARYGAKGLAWIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +  E       GP+ K  +    EA+R R   +DGD   F A +           R  I
Sbjct: 358 VKEGE-----FKGPIVKFFSEEEIEAVRERTGAEDGDLLLFSADNKKVVADVLGALRLKI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++LG+I+ N ++F W++DFP   ++E+ K+    H+PFT P+     L   D L+++A 
Sbjct: 413 GRQLGLIDDNEYKFAWVLDFPLLSYDEDAKRYVAEHHPFTRPKHEDLELLDTDPLAVRAE 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  EV  + F+ +G+S E    +FG L  AF+ G PPHGGIA
Sbjct: 473 AYDIVLNGYEVGGGSMRIYQREVQEKMFAALGLSPEEAHEKFGFLLDAFEYGTPPHGGIA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G DR+VMLL G  N+RE   FP + +  DLLM +PS V   QL +L +++ + P
Sbjct: 533 FGFDRLVMLLAGRTNLRETIAFPKTASATDLLMDAPSQVDGGQLEQLHIKLAKKP 587


>gi|30264472|ref|NP_846849.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529930|ref|YP_021279.1| aspartyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187293|ref|YP_030545.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65321769|ref|ZP_00394728.1| COG0173: Aspartyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165871956|ref|ZP_02216597.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|170709264|ref|ZP_02899684.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|228935723|ref|ZP_04098536.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229600038|ref|YP_002868689.1| aspartate--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254724671|ref|ZP_05186454.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254736505|ref|ZP_05194211.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254751358|ref|ZP_05203395.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757690|ref|ZP_05209717.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|46577220|sp|Q81LI7|SYD_BACAN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781713|sp|C3P990|SYD_BACAA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|30259130|gb|AAP28335.1| aspartate--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505078|gb|AAT33754.1| aspartyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181220|gb|AAT56596.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164712246|gb|EDR17782.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|170125840|gb|EDS94747.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|228823961|gb|EEM69780.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229264446|gb|ACQ46083.1| aspartate--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 591

 Score =  646 bits (1666), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 344/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVSVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDASVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLNVKEEK 591


>gi|326388938|ref|ZP_08210520.1| aspartyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326206538|gb|EGD57373.1| aspartyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 593

 Score =  646 bits (1666), Expect = 0.0,   Method: Composition-based stats.
 Identities = 356/599 (59%), Positives = 447/599 (74%), Gaps = 10/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CG L    VG  VRLSGWVHR R HGG++F+D+RDHYGITQ+VA+ DS    
Sbjct: 1   MHPYRSHTCGALSREHVGQNVRLSGWVHRKRDHGGVLFVDLRDHYGITQIVADTDSPALA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + +S+R E V+ I+G V +R+  T+NAN+ TG IE+ A+   +L+ AEELPLPV GE+EY
Sbjct: 61  LLESLRVESVVTIEGNVKARADATVNANLSTGAIEVYARGATVLAAAEELPLPVAGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR +YRFLDLRR+TLH NIVKRT+II++MR +M    F E STPILTASSPEGARDF
Sbjct: 121 PEDIRLRYRFLDLRRETLHANIVKRTKIISAMRRKMEGVGFTEYSTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHGGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN--TVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q++I  TME V+  +FE+F+ G   T   +F RI YD+A+ +YG+DKPDLRNP+I
Sbjct: 241 MSFVTQEEIWETMEPVIGSIFEDFAEGQAVTPIGSFPRIPYDEAMLKYGSDKPDLRNPLI 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLA 357
           + +V+ HF  S F +F KI  V  G  V AIPA G    +R F D MNEWAR++G  GL 
Sbjct: 301 ITDVSAHFTQSGFGLFEKI--VGGGGVVRAIPAPGTADKSRKFFDEMNEWARAEGYAGLG 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  +  E G     GP+AK+  +   E I   L +   D  FF AG   +    A  AR
Sbjct: 359 YVTRKGGEFG-----GPIAKNHGVEGMEKIYAELGLGADDGLFFAAGKVDQAAKLAGVAR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           N + ++LG+I    F  CWI+DFPFYEW+E+EKK++F+HNPF+MPQGG+++L   D L+I
Sbjct: 414 NRVGEQLGLIEQGAFRLCWIVDFPFYEWDEDEKKVEFSHNPFSMPQGGIDALNNADPLTI 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KAFQYDLVCNG+EIASG IRN   E M++AF  VG++K  VE RFGGLYRAFQ G PPHG
Sbjct: 474 KAFQYDLVCNGYEIASGSIRNQSPETMVRAFEIVGLTKADVEERFGGLYRAFQYGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+AAG+DRIVMLL GA+N+RE+SLFPM+Q   DLLMG+P+ VS++QLREL +R+VE  K
Sbjct: 534 GMAAGVDRIVMLLCGAQNLREISLFPMNQRAEDLLMGAPAPVSLKQLRELSIRVVEPAK 592


>gi|226311477|ref|YP_002771371.1| aspartyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226094425|dbj|BAH42867.1| aspartyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 596

 Score =  646 bits (1666), Expect = 0.0,   Method: Composition-based stats.
 Identities = 234/601 (38%), Positives = 360/601 (59%), Gaps = 10/601 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           +YRT   G++  + VG  V L+GWV + R  GG+IF+D RD  GI Q+V NP+     +E
Sbjct: 4   QYRTVHGGEVTTAHVGQEVVLNGWVQKRRDLGGVIFIDFRDRTGIVQIVFNPEYNKEAWE 63

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  VRSE+VL + G V++R+ E +N  + TG++E+   +IEIL+ A+  P  +  E + 
Sbjct: 64  AADKVRSEYVLVVKGKVVNRAPEAVNPKLKTGEVEVHISEIEILNDAKTPPFLIEDEIDV 123

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + ++++ R++   + R  +   NF+E  TPIL  S+PEGARD+
Sbjct: 124 DEQVRLKYRYLDLRRPEMQRSLLLRSKAAKAFRDYLDENNFMEIETPILQKSTPEGARDY 183

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 184 LVPSRVHPGEFYALPQSPQLFKQLLMVSGLERYYQIARCFRDEDLRADRQP-EFTQVDIE 242

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  ++IL  ME ++  VF++    + V   F R+ Y DA+ RYG+DKPD+R  + + 
Sbjct: 243 TSFLSMEEILPMMEKMVAHVFKQTVGVD-VPTPFPRLTYADAMARYGSDKPDVRFGMELT 301

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++    S+F+VF+  ++     +       G   +R   D + ++A   G  GLA+I 
Sbjct: 302 DVSDLVATSDFKVFAAAVAGGGQVKAINAKGCG-HYSRKEADDLGKFASRYGAKGLAWIG 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           ++  E       GP+AK         ++ RL +++GD   F+A  P          R+ +
Sbjct: 361 FKDGE-----VKGPIAKFFKEEELNEMKARLAVEEGDLLLFVADKPKVVADALGALRSKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             ELG+I+ + F F W++DFP  EW+E+ K+    H+PFT P+     L   D   ++A 
Sbjct: 416 GAELGLIDQSQFAFLWVVDFPLVEWDEDAKRYVALHHPFTRPKDEDLHLFDTDPGQMRAQ 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R    EV  + F+ +G + E    +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDMVLNGYELGGGSMRIFKREVQEKMFTTLGFTPEEARKQFGFLMDAFEYGTPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DR++MLL G  N+REV  FP + +  DL++ +P  V  +QL+EL +  +   ++ ++
Sbjct: 536 LGLDRLIMLLAGRTNLREVIAFPKTASASDLMVNAPDVVDGKQLKELSIATIVTEEEKVE 595

Query: 601 I 601
            
Sbjct: 596 A 596


>gi|297529264|ref|YP_003670539.1| aspartyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252516|gb|ADI25962.1| aspartyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 590

 Score =  646 bits (1666), Expect = 0.0,   Method: Composition-based stats.
 Identities = 241/590 (40%), Positives = 358/590 (60%), Gaps = 9/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-- 62
           RT+ CG++  + VG  V L GWV + R  GG+IF+D+RD  GI QVVA+PD +   +A  
Sbjct: 3   RTYYCGEVPETAVGERVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVASPDVSAEALAAA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VRSE+VL ++G V++R+ ET+N NI TG+IE+ A++IEI++ A+  P  +  + +  E
Sbjct: 63  ERVRSEYVLSVEGTVVARAPETVNPNIATGRIEIQAERIEIINEAKTPPFSISDDTDAAE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + + +  R +I  ++R  + +E F+E  TP+LT S+PEGARD+LV
Sbjct: 123 DVRLKYRYLDLRRPVMFQTLALRHKITKTVRDFLDSERFLEIETPMLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  G +RY+QIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 183 PSRVHPGEFYALPQSPQIFKQLLMVGGVERYYQIARCFRDEDLRADRQP-EFTQIDIEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+EQ+DI++  E ++  V +     +     F RI YD+A+ RYG+DKPD+R  + + +V
Sbjct: 242 FIEQEDIIDLTERMMAAVVKAAKGIDI-PRPFPRITYDEAMSRYGSDKPDIRFGLELVDV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E    S F+VF++ +      +           +R   D + E+A   G  GLA++   
Sbjct: 301 SEIVRDSAFQVFARAVKEGGQVKAINAKGAAPRYSRKDIDALGEFAGRYGAKGLAWLK-- 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +      GP+AK        A+R  L ++DGD   F+A +     +     R  + +
Sbjct: 359 ---AEGEELKGPIAKFFTDEEQAALRRALAVEDGDLLLFVADEKAIVAAALGALRLKLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+     F W+ D+P  E++EEE +   AH+PFTMP      L   +  +++A  Y
Sbjct: 416 ELGLIDEAKLAFLWVTDWPLLEYDEEEGRYYAAHHPFTMPVRDDIPLLETNPGAVRAQAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R    +V  + F  +G S+E    +FG L  AF+ G PPHGGIA G
Sbjct: 476 DLVLNGYELGGGSLRIFERDVQEKMFRALGFSEEEARRQFGFLLEAFEYGTPPHGGIALG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR+VMLL G  N+R+   FP + +   LL  +P  VS +QL EL L +V
Sbjct: 536 LDRLVMLLAGRMNLRDTIAFPKTASASCLLTEAPGPVSDKQLEELHLAVV 585


>gi|302389915|ref|YP_003825736.1| aspartyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200543|gb|ADL08113.1| aspartyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 591

 Score =  646 bits (1666), Expect = 0.0,   Method: Composition-based stats.
 Identities = 243/592 (41%), Positives = 350/592 (59%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTH CG L   + G  V L+GWV   R  GG+IF+D+RD  G+ QVV +P+     FE 
Sbjct: 6   KRTHHCGLLTSENTGQDVVLAGWVQTRRDLGGLIFVDLRDRSGVVQVVFSPEYNRQAFEK 65

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+V+ + G V  R  E +N  I TG+IE+  +++E+L+ A+  P P+  + +  
Sbjct: 66  ADELRSEFVIAVKGKVFKRPEENVNPKIPTGEIEVFVEELEVLNKAKTPPFPIEDDIKVD 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           ES+R KYR+LDLRR ++  N+  R ++  ++R  +    FIE  TP+LT S+PEGARDFL
Sbjct: 126 ESLRLKYRYLDLRRPSMLHNMTFRHKVNKAIRDFLDENGFIEVETPMLTRSTPEGARDFL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G+FYALPQ+PQ +KQ+LM +G +RY+QI  CFRDED R+DR P EF QLD+EM
Sbjct: 186 VPSRLNPGTFYALPQSPQLFKQILMVAGMERYYQITRCFRDEDLRADRQP-EFTQLDIEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +++ V E+ +    V   F RI Y DA+  YG+DKPD R  + M +
Sbjct: 245 SFVDVDDVISLNEKLVKYVVEKTTGRT-VEIPFRRITYRDAMEIYGSDKPDTRFGLEMVD 303

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VT+    +EF+VFS+        +   I       +R   D + E A+  G  GLA+I  
Sbjct: 304 VTDIAEKTEFKVFSEAAKSGGKVKGINIKNSAEQFSRRQIDELVEKAKEFGAKGLAWISL 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
                 +     P+AK       + +  R+  Q GD   F+A  D     +     R H+
Sbjct: 364 -----SSEGIKSPIAKFFAREVMDELLERMGAQPGDLLIFVADSDSKLVVTSLGQLRLHL 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L +I+ N   F W+++FP  EW+EEEK+    H+PFT P      L   D   ++A 
Sbjct: 419 GRQLNLIDKNKLNFLWVVEFPLLEWDEEEKRYVAMHHPFTSPMDEDLDLLEEDPGRVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H +E+  + F  +G +KE   N FG L RAF+ G PPHGGIA
Sbjct: 479 AYDLVLNGTELGGGSIRIHRTEIQERMFKVLGFTKERAWNNFGFLLRAFEYGTPPHGGIA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLLLG  ++R+   FP +QN   LL  +P+ V   QL+EL +++ 
Sbjct: 539 YGLDRMVMLLLGLNSIRDCIAFPKTQNASCLLTEAPAQVEPRQLKELYIQVT 590


>gi|296114975|ref|ZP_06833620.1| aspartyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978493|gb|EFG85226.1| aspartyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 641

 Score =  646 bits (1666), Expect = 0.0,   Method: Composition-based stats.
 Identities = 316/612 (51%), Positives = 413/612 (67%), Gaps = 10/612 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTHSC  L  SD G   RLSGWVH  R HGG++F+D+RDH+G+TQ+V    S   E
Sbjct: 37  MHPYRTHSCAALRASDAGQTARLSGWVHSKRDHGGLLFIDLRDHFGLTQIVIPAGSPVLE 96

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +R E VL I G V+ R A T N N+ TG IE+ AQ+I++ S A+ LP  V G+  Y
Sbjct: 97  LAEKIRVESVLTITGEVVLRDAATKNPNLPTGDIEVRAQQIDVQSAADVLPFQVAGQENY 156

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R  YR++DLRR+ +H+NI+ R ++I S+R RM    F+E  TPILTASSPEGARDF
Sbjct: 157 PEDLRLTYRYIDLRREKVHRNIMLRAQVIASLRRRMTDLGFVEFQTPILTASSPEGARDF 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 217 LVPARMHPGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEAARADRSPGEFYQLDFE 276

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIM 299
           M+F  Q+D+  T+E V+ GVF EF  G  VS   F RI Y  A+  YG+DKPDLRNP+ +
Sbjct: 277 MAFATQEDVFATLEPVMEGVFREFGGGRIVSKAPFERIPYATAMEVYGSDKPDLRNPLKI 336

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VT+ F  S F +F++I++        AIPA G G   RAF D++N WAR  G  GL Y
Sbjct: 337 SDVTDSFAESGFGLFARIVADGGQVR--AIPAPGAGEKPRAFFDKLNAWAREVGAGGLGY 394

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D      G GP+AK+L      AIR +  ++ GD+ FF AG   +   F+   R 
Sbjct: 395 IIFAED-----GGKGPIAKNLEPERIAAIRDKTGLKAGDAVFFAAGKGDEVARFSGLVRT 449

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA EL +I  N F FCWI DFP +E NE+  +IDF+HNPF+MPQGGME+L+  D L+IK
Sbjct: 450 RIATELDLIEENAFRFCWITDFPMFERNEDTGQIDFSHNPFSMPQGGMEALEKQDPLTIK 509

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH  +VM++AF   G  +  VE RFGG+  AF+ G PPHGG
Sbjct: 510 AYQYDIVCNGIELSSGAIRNHRPDVMIRAFEIAGYPESEVEARFGGMLNAFRYGAPPHGG 569

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597
            A G+DRIVMLL    N+REV LFP++Q   DL+MG+P+ V   +L+EL L + +  PK 
Sbjct: 570 SAPGVDRIVMLLADEPNIREVILFPLNQQGEDLMMGAPAPVESARLKELSLALDLPKPKP 629

Query: 598 ILKISVTTILRN 609
           ++  +  T  ++
Sbjct: 630 VVVKTSETPKKD 641


>gi|260576552|ref|ZP_05844541.1| aspartyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259021275|gb|EEW24582.1| aspartyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 592

 Score =  646 bits (1666), Expect = 0.0,   Method: Composition-based stats.
 Identities = 340/595 (57%), Positives = 434/595 (72%), Gaps = 5/595 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C  L  S VG  VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+ DSA F 
Sbjct: 1   MHAYRSHTCAGLNSSHVGQDVRLSGWVHRVRDHGGVLFIDLRDHYGITQVIADADSAAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              +VR+EWV+ IDG+V  R A  +N  + TG+IE+ A+   +L  A+ELP+PVFGE +Y
Sbjct: 61  GLNTVRAEWVIRIDGVVKGRDASLVNPKLPTGEIEVYAKAFTVLGAADELPMPVFGEVDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R  YRFLDLRRD LH N++ R+ ++ SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLTYRFLDLRRDKLHGNMMLRSNVVRSMRQRMWDQGFTEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+   ++ V++G+FEEF+   TV  ++  I Y D+++ YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQADVFAAVQPVVQGIFEEFAPDKTVYADWPLIAYRDSLKWYGSDKPDLRNPIRMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+EHF  S F +F+K+L  +   EV AIPA  GG +R FCDRMN +A+ +G PG+ YI 
Sbjct: 301 DVSEHFRGSGFAIFAKLLENDGT-EVRAIPAPTGG-SRKFCDRMNAFAQKEGLPGMGYIL 358

Query: 361 WRLDESGN-VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           WR  E G+ +   GP+AK++    TEAIR +L +  GD+ FF+ G P +F + A  ARN 
Sbjct: 359 WRNAEDGSGMEAAGPLAKNIGPERTEAIRQQLGLGLGDAAFFLGGKPEQFEAVAGRARNE 418

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           I +ELG+   NCF+F WI+DFP YE   +E KIDF+HNPF+MPQGG+E+L G D L + A
Sbjct: 419 IGRELGLTEENCFKFAWIVDFPMYEKT-DEGKIDFSHNPFSMPQGGLEALMG-DPLEVYA 476

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYDL CNG+E+ SGGIRNH  E+M +AF   G     VE RFGG+ +AF+ G PPHGG 
Sbjct: 477 YQYDLACNGYELISGGIRNHKPEIMFKAFELAGYPASEVEKRFGGMVKAFRYGAPPHGGC 536

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           AAGIDRIVMLL    N+REV +FPM+Q   DLLMG+PS     QLREL LR+V  
Sbjct: 537 AAGIDRIVMLLADEANIREVIMFPMNQRAEDLLMGAPSEPLSAQLRELSLRVVAK 591


>gi|323702181|ref|ZP_08113848.1| aspartyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532868|gb|EGB22740.1| aspartyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 601

 Score =  646 bits (1666), Expect = 0.0,   Method: Composition-based stats.
 Identities = 232/599 (38%), Positives = 339/599 (56%), Gaps = 10/599 (1%)

Query: 1   MH-RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SA 57
           MH   RTH CG+L    +G  V L GWV R R HGG+IF+D+RD  G+ Q+V +PD   A
Sbjct: 5   MHGLRRTHHCGELSKQHMGQEVVLMGWVQRRRDHGGLIFVDLRDRSGLVQIVFSPDVDEA 64

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F+ A++VR+E+VL I G V  R   T N N++TG+IE+ A  + +L+ A+  P  +   
Sbjct: 65  AFKKAEAVRNEYVLAIVGKVQERPEGTANPNMVTGEIEVYAHTLRVLNRAKTPPFYIEDH 124

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +  E++R +YR+LDLRR  + ++++ R R   S+R  +    F+E  TP+LT S+PEGA
Sbjct: 125 IDVDENLRLRYRYLDLRRPEMQQSLIMRHRAAKSVRDFLDNHGFLEIETPMLTKSTPEGA 184

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRVN G FYALPQ+PQ +KQLLM +G ++YFQI  CFRDED R+DR P EF Q+
Sbjct: 185 RDYLVPSRVNPGKFYALPQSPQIFKQLLMLAGMEKYFQIVRCFRDEDLRADRQP-EFTQI 243

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV+ DD+++ ME ++  V ++          F R+ Y +A+  YG+DKPD R  +
Sbjct: 244 DLEMSFVDADDVMSLMEQMIAKVCKDTIGLEI-KVPFPRLSYQEAMDLYGSDKPDTRFDM 302

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + ++T       F+VF+   +     +           +R   D +  +       GLA
Sbjct: 303 ELKDITPIAAKCGFKVFNSAAAAGGQVKGINAK-GCAAFSRKEIDDLTAFVAVYKAKGLA 361

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+    D     +   P+AK  N     AI+ +L+ Q GD   F+A  P    +     R
Sbjct: 362 YMMINEDG----SVKSPIAKFFNEDEIAAIKDKLEAQPGDLLLFVADKPAVVAAALGALR 417

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            H+AQ L +I  + + F W++DFP  E++ EE +    H+PFT P      L   D   +
Sbjct: 418 LHLAQRLNLIPEDRWNFLWVIDFPLLEYDAEEGRYFAMHHPFTSPVEEDIPLLQTDPGKV 477

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H  +V    F  +G+  E  + +FG +  AF+ G PPHG
Sbjct: 478 RARAYDMVLNGVEVGGGSIRIHRRDVQELMFKALGLGPEEAKEKFGFMLEAFEYGAPPHG 537

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GIA G DR+VMLL G  ++R+V  FP + +   L+  +P  V   QL EL +R     K
Sbjct: 538 GIAFGFDRLVMLLTGKDSIRDVIAFPKTASATCLMTQAPDVVDPAQLVELHIRSTAVVK 596


>gi|229592304|ref|YP_002874423.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|259511867|sp|C3JYT1|SYD_PSEFS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229364170|emb|CAY51826.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 591

 Score =  645 bits (1665), Expect = 0.0,   Method: Composition-based stats.
 Identities = 234/593 (39%), Positives = 344/593 (58%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  +  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNETLEGQEITLCGWVHRRRDHGGVIFLDIRDRDGLAQVVFDPDRAESFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R A  +N N+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKITGKVRLRPAGAVNKNMASGGIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRFLDLRR  + + +  R+R+  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFLDLRRPEMAEKLRLRSRMTTSIRRFLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ +I+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LDEKEIMGLTEQMIRNLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +             G    R   D   ++    G  GLAYI    
Sbjct: 300 DQLKDVDFKVFSGPANDPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K++ + N  AI  R+   DGD  FF A             R  +  +
Sbjct: 360 RANGVDGLQSPIVKNIPLDNLNAILDRVGAVDGDIVFFGADKAKIVSEALGALRIKLGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++ C  +   W++DFP +E N++       H+PFT P+     L+ N      +  YD
Sbjct: 420 LNLLTCE-WAPMWVVDFPMFEENDD-GSFSALHHPFTAPKCSPAELEAN-PAGALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI++   E +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGINEAEQEEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 537 DRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLRETPK 589


>gi|222055750|ref|YP_002538112.1| aspartyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|254781734|sp|B9M1C9|SYD_GEOSF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|221565039|gb|ACM21011.1| aspartyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 593

 Score =  645 bits (1665), Expect = 0.0,   Method: Composition-based stats.
 Identities = 238/593 (40%), Positives = 346/593 (58%), Gaps = 10/593 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EI 61
            RTH CG L   D G  V L GW HR R HGG+IF+D+RD  G+ Q+V +PD++      
Sbjct: 9   KRTHYCGTLTADDTGKEVVLMGWAHRRRDHGGLIFVDLRDREGLAQIVFDPDNSAEAHHK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++R+E+V+ + G V+ R   T+N N+ TG +E+     +ILS ++ LP  +    +  
Sbjct: 69  AEAIRNEYVVAVKGKVIPRPQGTVNTNLRTGAVEILVSACKILSRSKALPFTLDDYVDVA 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R K+R+LDLRR  L  N++ R+++    R  +    F+E  TP LT S+PEGARDFL
Sbjct: 129 ENLRLKHRYLDLRRPVLQDNLILRSKVAQVTRQYLTGNGFLELETPFLTKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N+G FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 189 VPSRINRGEFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQIDCEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++++DI+  ME ++  +F +  +  +VS    R+ Y ++I R+G D PDLR  + +  
Sbjct: 248 SFIDREDIITVMEGLIARIFADVKDM-SVSLPIKRMTYAESINRFGVDNPDLRFGLELVE 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    S F+VF+ +++     +       GG  +R   D + E+ +  G  GLAY+  
Sbjct: 307 LSDIVKGSGFKVFADVVAGGGIVKGLNAKGCGG-MSRKEIDDLTEFVKIYGAKGLAYVKV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D         P+ K        A+      + GD   F+A  P          RN +A
Sbjct: 366 TED-----GWQSPITKFFTGEEISAMTKTFAAEQGDLLLFVADKPKVVNDSLGKLRNQLA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG+++ N F F WI DFP  EW+EEEK+    H+PFT P         ND    +A  
Sbjct: 421 KILGLLDKNTFNFVWITDFPLLEWDEEEKRWAAVHHPFTAPMDEDLEYVENDPGRCRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  +V    F  +G+S+E  + +FG L  A + G PPHGGIA 
Sbjct: 481 YDLVLNGNEIGGGSIRIHQEKVQSLMFKMLGLSEEDAKAKFGFLLDALEYGTPPHGGIAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR++MLL G+ ++R+V  FP +Q    L+  +PS V ++QLRELGL+    
Sbjct: 541 GLDRLIMLLTGSDSIRDVIAFPKTQKGACLMSEAPSPVDLKQLRELGLKTTGK 593


>gi|330811396|ref|YP_004355858.1| Aspartate--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379504|gb|AEA70854.1| Aspartate--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 591

 Score =  645 bits (1665), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 342/593 (57%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLEGQEVTLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRADTFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R A   NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKITGKVRLRPAGAGNANMASGMIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+R+  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRMTTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI+   E ++R +F+E          F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LDEKDIMGLTEGMIRNLFKEVLGLEFGE--FPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +             G    R   D   ++    G  GLAYI    
Sbjct: 300 DQLKDVEFKVFSGPANDPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K++   N   I  R+   DGD  FF A             R  +  +
Sbjct: 360 RAAGVDGLQSPIVKNIPEANLNVILDRVGAVDGDIVFFGADKAKIVSEALGALRIKLGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++ C  +   W++DFP +E N++       H+PFT P+   + L+ N   +  +  YD
Sbjct: 420 LKLLTCE-WAPMWVVDFPMFEENDD-GSFSALHHPFTAPKCSPQELEAN-PATALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI++   E +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGINEAEQEEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 537 DRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|126733315|ref|ZP_01749062.1| aspartyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126716181|gb|EBA13045.1| aspartyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 617

 Score =  645 bits (1665), Expect = 0.0,   Method: Composition-based stats.
 Identities = 335/619 (54%), Positives = 423/619 (68%), Gaps = 27/619 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL  ++VG  VRLSGWV+RVR HGGI+F+D+RDHYGITQV+ +PDSA F 
Sbjct: 1   MHAYRSHTCADLTAANVGDTVRLSGWVNRVRDHGGILFIDLRDHYGITQVLCDPDSAAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R  E +N  + TG++E+  + IE+L  ++ELPL VFG++EY
Sbjct: 61  DVEKVRSEWCIRIDGEVKARDPELVNTKLPTGEVEVFVRAIEVLGASKELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYR+LDLRR+ +  N+  R+ ++ SMR RM    F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLKYRYLDLRREAMQDNMKLRSDVVASMRRRMWDSGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SG+D+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ V+ G+FEEF  G  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVITGIFEEFGGGRKVDQTWEQISYRDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L      EV AIPA  GG +R FCDRMN + + +G PG+ YIF
Sbjct: 301 VVSEHFAGSGFAIFAKLLEQEGT-EVRAIPAPTGG-SRKFCDRMNAFVQKEGLPGMGYIF 358

Query: 361 WRLDE------------------------SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
           WR                            G +   GP+AK++    TEAIR +L +  G
Sbjct: 359 WREKTADAVAQELGISVKEAQAKLKSGEVEGGMEAAGPLAKNIGPERTEAIRQQLGLGLG 418

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+ FF+ G P  F   A  ARN I  ELG+ + N F F WI+DFP YE +EE  KIDF H
Sbjct: 419 DAAFFLGGKPKAFEGVAGKARNVIGDELGLTDQNRFAFAWIVDFPIYEQDEETGKIDFEH 478

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           NPF+MPQGGM +L G D L +  +QYDL CNG+E+ SG IRNH  E+M +AF   G  K+
Sbjct: 479 NPFSMPQGGMAALDG-DPLKVLGYQYDLACNGYELVSGAIRNHRPEIMFKAFELAGYGKD 537

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
            VE RFGG+  AFQ G PPHGG AAGIDRIVMLL  A N+REV +FPM+Q   DL+M +P
Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRIVMLLADASNIREVIMFPMNQRAEDLMMDAP 597

Query: 577 STVSVEQLRELGLRIVENP 595
           S    EQLREL LR++   
Sbjct: 598 SEPQNEQLRELRLRVLPPE 616


>gi|30022478|ref|NP_834109.1| aspartyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|46577218|sp|Q817X8|SYD_BACCR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|29898036|gb|AAP11310.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 14579]
          Length = 591

 Score =  645 bits (1665), Expect = 0.0,   Method: Composition-based stats.
 Identities = 232/595 (38%), Positives = 343/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD    + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTCFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAADCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLSLKEEK 591


>gi|228993140|ref|ZP_04153062.1| Aspartyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228999190|ref|ZP_04158771.1| Aspartyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228760535|gb|EEM09500.1| Aspartyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228766599|gb|EEM15240.1| Aspartyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 591

 Score =  645 bits (1665), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 346/595 (58%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGQGAINENMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  ++R  + +E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMYNTFKMRHDVTKTIRNFLDSEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHEGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL  ME ++  V ++       +  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILEMMERMMTKVMKDAKGVEVRA-PFPRMKYADAMARYGSDKPDTRFAMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +        G  +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAADCGFKVFTSAVESGGQVKAINAKGAAGKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   LD   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMSTLDGAAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTDAPSPVAEAQLEELYLQLNVKEEK 591


>gi|312962762|ref|ZP_07777250.1| Aspartyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311282979|gb|EFQ61572.1| Aspartyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 591

 Score =  645 bits (1664), Expect = 0.0,   Method: Composition-based stats.
 Identities = 234/593 (39%), Positives = 344/593 (58%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  +  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNETLEGQEITLCGWVHRRRDHGGVIFLDIRDRDGLAQVVFDPDRAESFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R A  +N N+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKITGKVRLRPAGAVNKNMASGGIEVLGYELEVLNESEPPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRFLDLRR  + + +  R+R+  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFLDLRRPEMAEKLRLRSRMTTSIRRFLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ +I+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LDEKEIMGLTEQMIRNLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +             G    R   D   ++    G  GLAYI    
Sbjct: 300 DQLKEVDFKVFSGPANDPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K++ + N  AI  R+   DGD  FF A             R  +  +
Sbjct: 360 RANGVDGLQSPIVKNIPLDNLNAILDRVGAVDGDIVFFGADKAKIVSEALGALRIKLGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++ C  +   W++DFP +E N++       H+PFT P+     L+ N      +  YD
Sbjct: 420 LNLLTCE-WAPMWVVDFPMFEENDD-GSFSALHHPFTAPKCSPAELEAN-PAGALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI++   E +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGINEAEQEEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 537 DRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLRETPK 589


>gi|317484492|ref|ZP_07943402.1| aspartyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316924268|gb|EFV45444.1| aspartyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 607

 Score =  645 bits (1664), Expect = 0.0,   Method: Composition-based stats.
 Identities = 235/590 (39%), Positives = 355/590 (60%), Gaps = 14/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG+L  +D G+ V L GWV   R HGG+IF+D+RD +G+TQ+V +P+      E A
Sbjct: 20  RTHTCGELTGADNGAEVCLMGWVQYRRDHGGLIFVDLRDRFGLTQIVFSPEYAPEAHEQA 79

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++RSE+VL + G V  R    +N N+ TG++E+   + ++L+ ++  P  +    E  E
Sbjct: 80  GALRSEYVLAMKGKVRPRPEGMVNPNLKTGEVEVVVSEWKLLNTSKTPPFQIEDRVEAGE 139

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R ++R+LDLRR  + +N+  R+R   ++R  + ++ F+E  TPILT S+PEGARD+LV
Sbjct: 140 NLRLQWRYLDLRRPRMARNLALRSRTAMAIRNELASQGFLEVETPILTKSTPEGARDYLV 199

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQQ+KQ  M +G DRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 200 PSRLNHGQFYALPQSPQQFKQFCMIAGLDRYFQIARCFRDEDLRADRQP-EFTQVDIEMS 258

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F ++  +++  E ++  VF+E    +     F R+ +D+A+ RYG DKPD R  + + +V
Sbjct: 259 FADEKQVMDMAEGLMIRVFKEALGADI-PAPFPRMTWDEAMSRYGVDKPDTRFGLELQDV 317

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T    +S F++F+    V            G    R   D + E+ +  G  GLA+I  R
Sbjct: 318 TSIVSNSGFKLFASAKLVK-----AMRVPGGESLTRKEIDELTEFVKIYGAQGLAWIKIR 372

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E        P+AK L+      +   L +  GD  FF AG+P    +   + R H+ +
Sbjct: 373 ENE-----WQSPIAKFLSDEERAGLTEALGLSVGDIVFFQAGEPGMVNAALGNLRVHLGE 427

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+I  N + F W+ DFP YE++EEE +    H+PFT P+ G      ++  + KA  Y
Sbjct: 428 KLGLIPENAWNFLWVTDFPLYEYSEEENRYVACHHPFTAPKDGDLEKMVSEPAATKARAY 487

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H + V  + F  +G SKE  E++FG   +A + G PPHGGIA G
Sbjct: 488 DMVLNGNEVGGGSIRIHEAAVQRKMFEALGFSKESYESQFGYFIQALEHGAPPHGGIAFG 547

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR++ML+  + ++R+V  FP +Q    L+  +P  VS +QLRELGLR+ 
Sbjct: 548 LDRLIMLMSDSPSIRDVIAFPKTQKATCLMTNAPDIVSAKQLRELGLRLR 597


>gi|294676089|ref|YP_003576704.1| aspartyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294474909|gb|ADE84297.1| aspartyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 593

 Score =  645 bits (1664), Expect = 0.0,   Method: Composition-based stats.
 Identities = 338/595 (56%), Positives = 435/595 (73%), Gaps = 5/595 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C  L  ++ G  VRLSGWVHRVR HGG++F+D+RDHYGITQ++ + DS  F 
Sbjct: 1   MHAYRSHTCAALSAANAGEEVRLSGWVHRVRDHGGVLFIDLRDHYGITQILCDGDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGERE 119
             + VR+EWV+ IDG V  R A  INA I TG+IE+ A+++E+L   E +LP+ VFGE E
Sbjct: 61  ALEKVRAEWVIRIDGKVKLRDASLINAKIPTGEIEVYAREVEVLGPVEGDLPVQVFGEPE 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           YPE  R  YRFLDLRRD+LH+N++ R+ ++ S+R RM    F E  TPI+TASSPEGARD
Sbjct: 121 YPEETRLTYRFLDLRRDSLHQNMMLRSNVVRSLRNRMWDRGFTEFQTPIITASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQL+M +GFDRYFQIAPCFRDEDPR+DR P +FYQLD+
Sbjct: 181 FLVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV+Q+D+   ++ V++G+FEEF  G  V  N+  I Y DA++ YG+DKPDLRNPI M
Sbjct: 241 EMSFVKQEDVFAAVQPVIQGLFEEFGKGKKVDPNWPLIAYRDALKWYGSDKPDLRNPIKM 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V+EHF  S F +F+K+L      EV AIPA  GG +R FCDRMN +A++ G PG+ YI
Sbjct: 301 ADVSEHFKDSGFAIFAKLLENEGT-EVRAIPAPTGG-SRKFCDRMNAFAQANGLPGMGYI 358

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FWR  E G++   GP+AK L    TEAIR +L++ +GD+ FF+ G   +F S A  ARN 
Sbjct: 359 FWRSAEDGSMEAAGPIAKALGAERTEAIRTQLNLAEGDAVFFLGGKAEQFESVAGKARNE 418

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           I +ELG+   + F F WI+DFP YE   +E KIDF+HNPF+MPQGG+E+L G D L + A
Sbjct: 419 IGRELGLTETDTFRFAWIVDFPMYEKT-DEGKIDFSHNPFSMPQGGLEALMG-DPLKVYA 476

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYDL CNG+E+ SGGIRNH  ++M +AF   G  KE VE RFGG+ +AF+ G PPHGG 
Sbjct: 477 YQYDLACNGYELVSGGIRNHRPDIMFKAFELAGYPKEEVEKRFGGMVKAFRYGAPPHGGC 536

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           AAGIDRIVMLL    N+REV +FPM+Q   DL+MG+PS    EQLREL LR++  
Sbjct: 537 AAGIDRIVMLLADTANIREVIMFPMNQRAEDLMMGAPSEPMNEQLRELRLRVLPK 591


>gi|148261350|ref|YP_001235477.1| aspartyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|166225312|sp|A5G126|SYD_ACICJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146403031|gb|ABQ31558.1| aspartyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 595

 Score =  645 bits (1664), Expect = 0.0,   Method: Composition-based stats.
 Identities = 322/600 (53%), Positives = 414/600 (69%), Gaps = 9/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH CG L  +D G   RLSGWV+  R HGG++F+D+RDHYGITQ V    S  F 
Sbjct: 1   MHEYRTHDCGALRAADAGITARLSGWVNVKRDHGGLLFIDLRDHYGITQCVFPAGSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+++R+E V+ + G V+ R A+T+N  + TG+IEL A+ +E+ S A+ LP+ V GE ++
Sbjct: 61  AAEALRAESVITVTGRVVKRDADTVNPRLPTGEIELVAETVEVQSTADVLPIQVAGEAQF 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ LH+NI+ R  +I  +R  M A  F E +TPILTASSPEGARDF
Sbjct: 121 PEELRLRYRFLDLRREKLHRNIMLRANVIAWLRREMTARGFTEFTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPSRVHPGQFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEASRADRAPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+  T+E VL G+F EF  G  V+   F RI YD+A+ +YG+DKPDLRNP+++
Sbjct: 241 MSFVTQEDVFATIEPVLGGLFREFGGGRGVTQWPFPRIAYDEALLKYGSDKPDLRNPLLI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTE F  S F +F+KI++          P  GG   R+F D++N+WARS+G  GL YI
Sbjct: 301 TDVTEAFRDSGFGLFAKIVAGGGVVRAIPAPGTGGN-PRSFFDKLNDWARSEGAGGLGYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  D        GP+AK+L     EAIR       GD+ FF AG PL+   FA   R  
Sbjct: 360 IFAPD-----GAKGPIAKNLEPARAEAIREATGASVGDAVFFAAGKPLEAAKFAGTVRTK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+I+   FEFCWI+DFP YE +EE  +I F+HNPF+MPQGG+E+L G D L+IKA
Sbjct: 415 LGTDLGLIDGAKFEFCWIVDFPMYERDEETGQIVFSHNPFSMPQGGLEALNGQDPLTIKA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           FQYD+VCNG E++SG IRNH  ++ML+AF   G   E VE RFGG+  AF+ G PPHGG 
Sbjct: 475 FQYDIVCNGVELSSGAIRNHRPDIMLRAFEIAGYGAEEVEARFGGMLNAFRYGAPPHGGS 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV--ENPKK 597
           A G+DR+VMLL    N+REV  FP++Q   DLLMG+P+ V   +L+EL L I     PKK
Sbjct: 535 APGVDRMVMLLADEPNLREVIAFPLNQQGQDLLMGAPAPVPAARLKELSLAIALPPAPKK 594


>gi|149375108|ref|ZP_01892880.1| aspartyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149360472|gb|EDM48924.1| aspartyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 601

 Score =  645 bits (1664), Expect = 0.0,   Method: Composition-based stats.
 Identities = 230/603 (38%), Positives = 346/603 (57%), Gaps = 7/603 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  S +   V L GWVHR R HGG+IFLD+RD  GI+QVV +PD+   F +A+
Sbjct: 2   RSHYCGGINESHIDQEVTLCGWVHRRRDHGGVIFLDLRDRDGISQVVFDPDTPESFNLAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V  R A T NAN+ TGQ+EL  +++ IL+ A   P P+    +  E 
Sbjct: 62  KVRSEFVIQVTGRVRRRPAGTENANMPTGQVELLGKQLSILNAAATPPFPLDEHVDVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYRF+DLRR  +   +  R+R+ + +R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKYRFVDLRRPEMLNRLRFRSRVTSYIRNFLDSNGFMDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++GSF+ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQP-EFTQIDIEASF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ ++   EN++R +F++    +     F R+ Y +A++RYG+DKPDLR P+ + +V 
Sbjct: 241 IDEEALMTLNENMIRSLFKDVLEVDLPE--FPRMPYAEAMQRYGSDKPDLRIPLELVDVG 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF+   +   G        KGG   R   D   ++    G  GLAYI    
Sbjct: 299 DLVAGVDFKVFAGPANDPKGRVAALRVPKGGELTRKQIDDYTKYVGIYGAKGLAYIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K L     +A+  R   +DGD  FF A             R  +  +
Sbjct: 359 TSKGVEGLQSPIIKFLGDDVAQAVIERSGAEDGDIVFFGADKTNVVNEALGALRIKVGHD 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++  + +   W++DFP +E   +   +   H+PFT P    + L+ +   +  +  YD
Sbjct: 419 LNMLT-SEWAPLWVVDFPMFEETSD-GSLTAIHHPFTAPSCSGDELEAS-PATALSRAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  ++    F  +GI  E    +FG L  A + G PPHGG+A G+
Sbjct: 476 MVLNGTELGGGSIRIHDEKMQESVFRTLGIEHEEARAKFGFLLDALKYGCPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISV 603
           DR++ML+ GA ++R+V  FP +Q+   L+  +P  V  +QLREL +R  +   K  +   
Sbjct: 536 DRLIMLMTGASSIRDVIAFPKTQSATCLMTQAPGEVDDKQLRELHIRRRKPLAKAGESKE 595

Query: 604 TTI 606
            T 
Sbjct: 596 DTQ 598


>gi|167636507|ref|ZP_02394804.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|254684158|ref|ZP_05148018.1| aspartyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254741543|ref|ZP_05199230.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|167528100|gb|EDR90897.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0442]
          Length = 591

 Score =  645 bits (1664), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 343/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVSVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDASVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+      AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADCYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLNVKEEK 591


>gi|308187177|ref|YP_003931308.1| Aspartyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308057687|gb|ADO09859.1| Aspartyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 592

 Score =  645 bits (1663), Expect = 0.0,   Method: Composition-based stats.
 Identities = 225/597 (37%), Positives = 334/597 (55%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F++A 
Sbjct: 2   RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQDAFKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N+++ TG++E+ AQ + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARDEKNKNSDMATGEVEVFAQALTIINRSEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMVTRLKTRAKITSFVRRFMDDEGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    + + ME ++R ++++    +     F ++ + +A+ RYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVRDIMERLIRNLWQDVQGVDLGE--FPQMTFAEAMHRYGSDKPDLRNPMELVDVG 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G   +R   D   ++    G  GLA++   +
Sbjct: 297 DLLKSVEFQVFSGPANDEKGRVAALRVPTGAQLSRKQIDEYGKFVEIYGAKGLAWMKVNV 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    E I  R   QDGD  FF A             R  + +E
Sbjct: 357 RADGLEGVQSPVAKFLNAEIVEGILSRTGAQDGDIIFFGADRAKVVADALGALRLKVGRE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I +   +   W++DFP +E +EE   +   H+PFT P+         D     A  YD
Sbjct: 417 LNITDEKAWAPLWVIDFPMFEEDEE-GGLAAMHHPFTAPKEMSADELAADPTRAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    FS +GI +     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGKMQQTVFSILGIEEHEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+ MLL G  N+R+V  FP +     ++  +PS  +   L ELG+++V+  K   K
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACMMTEAPSEANPASLLELGIQVVKKEKLENK 592


>gi|323142309|ref|ZP_08077141.1| aspartate--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413193|gb|EFY04080.1| aspartate--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 598

 Score =  645 bits (1663), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/599 (39%), Positives = 358/599 (59%), Gaps = 9/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-- 58
           ++  R+H CG L     G  V L GWV + R HGG+IF+D+RD  GI QVVA+P+SA   
Sbjct: 2   INEKRSHHCGVLTKEQAGEQVVLCGWVAKRRDHGGLIFIDLRDRSGIVQVVADPESAGSS 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F+ A+ +R+E+V+ + G V  R  +TIN NI TG IE+ A  IE+L+ A+  P  +    
Sbjct: 62  FKTAEDIRNEYVIKVIGNVRLRDEDTINENIPTGTIEVLAHDIEVLNGAKTPPFYIKDGI 121

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E++R KYR+LDLRR  + +N++ R ++   MR  +   +F+E  TP+L  S+PEGAR
Sbjct: 122 DTDENLRLKYRYLDLRRPEMQRNLILRHKVAKLMRDYLDDNHFLEIETPMLCKSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G FYALPQ+PQ +KQLLM +G +RYFQIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGKFYALPQSPQIFKQLLMVAGMERYFQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+E D+IL  ME ++  +F+     +     F R+ +DDA+ R+G+DKPDLR  + 
Sbjct: 241 MEMSFMEVDEILELMEGLIHHIFKGALGKDI-QIPFQRLTWDDAMDRFGSDKPDLRFGME 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + NV+E      F+VF+ +++     +   +        R   D + ++    G  G+A+
Sbjct: 300 LKNVSEAVQGCTFQVFNNVIANGGQVKCINVKGY-ADIPRRQLDELVKFCGIYGAKGMAW 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           + +  +          +AK  +  N EAI+   +++ GD   F+A  P    +     R 
Sbjct: 359 LQFPAEG----GVKSSIAKFFSDENIEAIKKAAEVEAGDLLLFVADKPSVVAASLGALRI 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+  G+I+ +   F W++DFP +E+NEEEK+    H+PFT P+     L   +   + 
Sbjct: 415 EMAKRRGLIDPDKLAFTWVVDFPMFEYNEEEKRYVAMHHPFTAPRDEDLPLLLTNPGKVY 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG EI  G IR H  +V  + F  +G+S E  + +FG +  AF+ G PPHGG
Sbjct: 475 AKAYDMVLNGTEIGGGSIRIHRRDVQKKVFEAIGLSDEEAQEKFGFMMNAFEYGAPPHGG 534

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DR++M++    ++R+V  FP +Q+  DL+  +P+ V  +QLREL ++     KK
Sbjct: 535 LAFGLDRLIMIMAQRDSIRDVIAFPKTQSASDLMTQAPNDVDEKQLRELHIKTSLLMKK 593


>gi|304396239|ref|ZP_07378121.1| aspartyl-tRNA synthetase [Pantoea sp. aB]
 gi|304356608|gb|EFM20973.1| aspartyl-tRNA synthetase [Pantoea sp. aB]
          Length = 592

 Score =  645 bits (1663), Expect = 0.0,   Method: Composition-based stats.
 Identities = 224/597 (37%), Positives = 335/597 (56%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F++A 
Sbjct: 2   RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQDAFKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N+++ TG++E+ AQ + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARDEKNKNSDMATGEVEVFAQALTIINRSEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMVTRLKTRAKITSFVRRFMDDEGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++++    +     F ++ + +A+ RYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREIMERLIRNLWQDVQGVDLGE--FPQMTFAEAMHRYGSDKPDLRNPMELVDVG 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF+VFS   +   G         G   +R   D   ++    G  GLA++   +
Sbjct: 297 DLLKNVEFQVFSGPANDEKGRVAALRVPTGAQLSRKQIDEYGKFVEIYGAKGLAWMKVNV 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    E I  R   QDGD  FF A             R  + +E
Sbjct: 357 RADGLEGVQSPVAKFLNAEIVEGILSRTGAQDGDIIFFGADRAKVVADALGALRLKVGRE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I +   +   W++DFP +E +EE   +   H+PFT P+         D     A  YD
Sbjct: 417 LNITDEKAWAPLWVIDFPMFEEDEE-GGLAAMHHPFTAPKEMSAEELAADPTRAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    FS +GI +     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGKMQQTVFSILGIEEHEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+ MLL G  N+R+V  FP +     ++  +PS  +   L ELG+++++  K  +K
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACMMTEAPSEANPASLLELGIQVIKKEKPEIK 592


>gi|319644799|ref|ZP_07999032.1| aspartyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|317392608|gb|EFV73402.1| aspartyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 592

 Score =  645 bits (1663), Expect = 0.0,   Method: Composition-based stats.
 Identities = 241/596 (40%), Positives = 349/596 (58%), Gaps = 10/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+ CG++    +G  V L GWV + R  GG+IF+D+RD  GI QVV NPD      E A
Sbjct: 4   RTYYCGEITEKAIGETVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKDALETA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           +S+RSE+VL I G V++R   T+N N+ TG+IE+ A+ +++LS A+  P  +  +  E  
Sbjct: 64  ESIRSEYVLDITGKVVAREEATVNPNLKTGRIEIQAESVDVLSAAKTPPFAISDQAAEVS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR K+R+LDLRR  +  ++  R  +  ++R  +    F++  TP+LT S+PEGARD+L
Sbjct: 124 EDIRLKHRYLDLRRPEMFNSLKMRHNVTKAVRRFLDDNGFLDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQIFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI+   E ++  V  E       S    R+ Y+DA+ RYG+DKPD R  +++ +
Sbjct: 243 SFMSQEDIMKLSEEMMAHVMRETHGIEI-SLPLPRMSYEDAMNRYGSDKPDTRFGMLLTD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V+E    S+F+VF+  ++     +   +       +R   D + E+A + G  GLA++  
Sbjct: 302 VSEAVKDSDFKVFASAVANGGAVKAINVKGAAANYSRKDIDALGEFAANYGAKGLAWLKT 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK       EA+   LD  DGD   F+A             R  + 
Sbjct: 362 EAD-----GLKGPIAKFFAGEKQEALVQALDAADGDLLLFVADKLEVVNDALGALRLKLG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL +I+ + F F W++D+P  E++ EE +   AH+PFTMP      L   +   +KA  
Sbjct: 417 KELNLIDESLFNFLWVVDWPLLEYDAEEGRYYAAHHPFTMPVREDLKLIETNPQDMKAQA 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+  G IR    +V  + F  +G S+E  + +FG L  AF  G PPHGGIA 
Sbjct: 477 YDLVLNGYELGGGSIRIFEKDVQEKMFGLLGFSEEEAKEQFGFLLEAFDYGAPPHGGIAL 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VMLL G  N+R+   FP + +   L+  +PS V   QL EL L I    ++
Sbjct: 537 GLDRLVMLLSGRTNLRDTIAFPKTASASCLMTEAPSEVDNAQLDELHLEIKRKIRQ 592


>gi|77460632|ref|YP_350139.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|97196812|sp|Q3K7V6|SYD_PSEPF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|77384635|gb|ABA76148.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 591

 Score =  645 bits (1663), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 342/593 (57%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDRDGLAQVVFDPDRAESFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R A   NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKITGKVRLRPAGATNANMASGMIEVLGYELEVLNESETPPFPLNEFSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRFLDLRR  + + +  R+R+  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFLDLRRPEMAEKLRLRSRMTTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI+   E ++R +F+E  +       F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LDEKDIMGLTEGMIRNLFKEVLDLEFGE--FPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +             G    R   D   ++    G  GLAYI    
Sbjct: 300 DQLKEVDFKVFSGPANDPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K++   N   I  R+   DGD  FF A             R  +  +
Sbjct: 360 RAAGVEGLQSPIVKNIPEANLNVILDRVGAVDGDIVFFGADKAKIVSEALGALRIKLGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++ C  +   W++DFP +E N++       H+PFT P+   E L+ N      +  YD
Sbjct: 420 LKLLTCE-WAPMWVVDFPMFEENDD-GSFSALHHPFTAPKCSPEELEAN-PAGALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI++   E +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGINEAEQEEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 537 DRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLRETPK 589


>gi|83593407|ref|YP_427159.1| aspartyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|97196835|sp|Q2RSM3|SYD_RHORT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|83576321|gb|ABC22872.1| aspartyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 606

 Score =  644 bits (1662), Expect = 0.0,   Method: Composition-based stats.
 Identities = 331/604 (54%), Positives = 427/604 (70%), Gaps = 10/604 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+C  L   +VG  VRLSGWVHR R HG ++F+D+RDHYG+TQVV +  SA F+
Sbjct: 1   MHRYRTHTCEQLRPENVGETVRLSGWVHRKRDHGNLLFVDLRDHYGLTQVVCDVSSAVFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             ++VR+E V+ + G V++R+AET NA + TG IE+ AQ +E+LS +E LP+ V G++EY
Sbjct: 61  TLEAVRAESVVSVTGTVVARTAETANAKLPTGAIEVKAQTVEVLSQSEVLPMQVAGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R  YRFLDLRR+ +H N+V R+++I+S+R RM  + F+E  TPILTASSPEGARDF
Sbjct: 121 PEDMRLTYRFLDLRREDVHANMVLRSKVISSLRRRMTDQGFLEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQ+LM SGFDRYFQ+APCFRDED R+DR PGEFYQLD E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQFKQMLMVSGFDRYFQVAPCFRDEDSRADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN-TVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+   +E VL GVFEEF          F RI YD+A+ ++G+DKPDLRNP+  
Sbjct: 241 MSFVTQEDVFAAIEPVLVGVFEEFGGDRAVTPAPFPRIPYDEAMLKFGSDKPDLRNPLRN 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTEHF    F +FSK +++       AIPA G  G  R + D++NEWAR  G  GL Y
Sbjct: 301 ADVTEHFADGGFGLFSKQIALGSVVR--AIPAPGAAGRPRGWYDKLNEWARESGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           + +           GP+AK+L     EAIR  LD++ GDS FF    PLK   F+   R 
Sbjct: 359 VVFE-----EAGPKGPIAKNLEPERVEAIRQALDLKAGDSVFFACDKPLKAAKFSGLVRE 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I  +LG+     F FCW +DFP YE NEE  +I+F+HNPF+MPQG ME+L+  D L+IK
Sbjct: 414 RICDDLGLRETGVFRFCWTVDFPMYEMNEETGQIEFSHNPFSMPQGEMEALETMDPLAIK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH+ E+M +AF   G  KE VE RFGG+ RAF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIELSSGAIRNHLPEIMYKAFEIAGYPKEEVEARFGGMLRAFKFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
            A GIDRIVMLL    N+REV LFPM+    DLLM +P+TVS +QL+EL +++ + PKK 
Sbjct: 534 SAPGIDRIVMLLADEPNIREVILFPMNGQAQDLLMQAPNTVSDKQLKELHIKL-DLPKKA 592

Query: 599 LKIS 602
           LK+ 
Sbjct: 593 LKVD 596


>gi|162319786|ref|YP_422199.2| aspartyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 598

 Score =  644 bits (1662), Expect = 0.0,   Method: Composition-based stats.
 Identities = 314/603 (52%), Positives = 414/603 (68%), Gaps = 10/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CG L  +D G   RLSGWVHR R HG ++F+D+RDHYGITQ V +  S  F 
Sbjct: 1   MHVYRSHTCGQLKAADAGIQARLSGWVHRKRDHGNLLFVDLRDHYGITQCVIDVSSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                R E V+ + G V+ RSAETIN  + TG+IEL   ++EI S+A+ LP+ V G++EY
Sbjct: 61  ALDKARPESVITVTGKVVKRSAETINPRLPTGEIELQVAEVEIQSIADVLPIQVAGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ +H N++ R+R+I  +R  MI + F E  TPILTASSPEGARD+
Sbjct: 121 PEDMRLRYRFLDLRREDVHANMMLRSRVIAYLRQAMIGQGFTEFQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFD+YFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQFKQLLMVAGFDKYFQIAPCFRDEAGRADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEF-SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MS+V QDD+   +E VL GVF+EF          F RI Y D++ +YG+DKPDLRNPII+
Sbjct: 241 MSYVTQDDVFAAIEPVLEGVFKEFGKGRAVTPAPFPRITYADSMLKYGSDKPDLRNPIII 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F+K+  V+ G  V AIPA G  G  R++ D++N+WAR  G  GL Y
Sbjct: 301 ADVTEPFRGSGFGLFAKL--VDKGAVVRAIPAPGAAGQPRSWFDKLNDWARENGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D        GP+AK+L     EAI+   +++DGD+ FF     L    FA   R 
Sbjct: 359 IQFAAD-----GPKGPIAKNLEPARVEAIKAAANLKDGDAVFFACDKALPAAKFAGLVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I  EL ++  + F+FCW +DFP YE NEE   ++F+HNPF+MPQGGM++L   D L+I 
Sbjct: 414 KIGNELDLLEKDVFKFCWTVDFPMYEINEETGLVEFSHNPFSMPQGGMDALLNQDPLTIN 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH  ++M +AF   G S   VE  FGG+  AF+ G PPHGG
Sbjct: 474 AYQYDIVCNGVELSSGAIRNHRPDIMYKAFEIAGYSAAHVEEHFGGMLNAFKFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597
            A G+DRIVMLL    N+RE+ LFPM+Q   DLLM +P+ +++E+LREL +++ +  PKK
Sbjct: 534 SAPGVDRIVMLLADQPNIREIILFPMNQQAQDLLMQAPAEIAMERLRELHIKVDLPKPKK 593

Query: 598 ILK 600
            +K
Sbjct: 594 EVK 596


>gi|20807683|ref|NP_622854.1| aspartyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|24212404|sp|Q8RAI7|SYD_THETN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|20516231|gb|AAM24458.1| Aspartyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 592

 Score =  644 bits (1662), Expect = 0.0,   Method: Composition-based stats.
 Identities = 238/590 (40%), Positives = 353/590 (59%), Gaps = 10/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTH CG+LGV DVG  V + GWV+  R HGG++F+D+RD  GI Q+V +       FE 
Sbjct: 9   KRTHMCGELGVKDVGKSVVVMGWVNSRRDHGGLVFIDLRDRTGIVQIVFSEQVSKEVFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +SVRSE+VL ++G V+ R  E +N  I TG+IE+ A+ ++ILS +E  P P+       
Sbjct: 69  VQSVRSEYVLAVEGEVVKRLPENVNPKIPTGEIEIYAKNLKILSKSETPPFPIEDRSNVS 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR ++ +N++ R ++  ++R  +    FIE  TP+L  S+PEGARD+L
Sbjct: 129 EAVRLKYRYLDLRRPSMQRNLITRFKLTQAVREFLNDNGFIEIETPMLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM +GFDRY+QIA C RDED R+DR P EF Q+D+EM
Sbjct: 189 VPSRIYPGKFYALPQSPQIFKQLLMIAGFDRYYQIARCLRDEDLRADRQP-EFTQIDIEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE +D+L+  E +++ VF++  + + +   F R+ Y +A+ R+GTDKPDLR  + + +
Sbjct: 248 SFVEVEDVLDINERMIKHVFKKVLDVD-LDIPFRRLTYQEAMERFGTDKPDLRFGMELKD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    SEF VF   L          +        R   D + E+A++ G  GL ++  
Sbjct: 307 LSDILRESEFNVFKNALKNGGSIRGINVK-GAASMTRKQLDELVEFAKNFGAKGLLWMQV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E        P  K L       I  RL+ + GD    +A             R  +A
Sbjct: 366 LEGE-----VKSPATKFLTEGELNKILERLEAEVGDLLLIVADKDEVVFDTLGHLRVEMA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   +I+ + +EF W++DFP  E++EEEK+    H+PFT P+     L   + L ++A  
Sbjct: 421 KRFNLIDESKYEFVWVVDFPLLEYDEEEKRYVAKHHPFTSPKDEDIDLLEKEPLKVRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H +E+  + F  +G S+E    +FG L  AF+ G PPHGGIA 
Sbjct: 481 YDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEEAWKKFGFLMEAFKYGAPPHGGIAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+ M++ G+  +R+V  FP +QN   L+  +PS VS +QL+EL ++I
Sbjct: 541 GLDRLAMIMTGSDTIRDVIAFPKTQNAVCLMSDAPSEVSEKQLKELHIKI 590


>gi|144899163|emb|CAM76027.1| Aspartyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 595

 Score =  644 bits (1662), Expect = 0.0,   Method: Composition-based stats.
 Identities = 310/600 (51%), Positives = 412/600 (68%), Gaps = 10/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH+YRTH+CG L  SD G+  RLSGWVHR R HG ++F+D+RDHYG+TQ V +  SA F 
Sbjct: 1   MHQYRTHTCGQLRASDAGTIARLSGWVHRKRDHGNLLFVDLRDHYGLTQCVLDISSAVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             +  R E V+ + G V+SR+++TIN  + TG+IEL   +IEI S+A+ LP+ V G++EY
Sbjct: 61  TLEKARPESVITVTGKVVSRTSDTINPRLPTGEIELQVAEIEIQSIADVLPIQVAGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+ +H N++ R+ +I  +R  M+ + F E  TPILTASSPEGARD+
Sbjct: 121 PEDMRLKYRFLDLRREDVHANMMLRSEVIAYLRKAMLDQGFTEFQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQAPQQ+KQLLM +GFD+YFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPARLHPGKFYALPQAPQQFKQLLMVAGFDKYFQIAPCFRDEAGRADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEF-SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MS+V QDD+   +E VL GVF++F          F RI Y +++ +YG+DKPDLRNPI +
Sbjct: 241 MSYVTQDDVFAAIEPVLEGVFKQFGKGRKVTPAPFPRIPYAESMLKYGSDKPDLRNPIEI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F+K+  V+ G  V AIPA G     R++ D++NEWAR  G  GL Y
Sbjct: 301 ADVTEPFRGSGFGLFAKL--VDKGAVVRAIPAPGAANQPRSWFDKLNEWARENGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D        GP+AK+L      AI+    + DGD+ FF     L    FA   R 
Sbjct: 359 IQFAAD-----GAKGPIAKNLEPERINAIKEAAKLNDGDAVFFACDKELPAAKFAGLVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I  +L ++  + F+FCW +DFP YE NEE   IDF+HNPF+MPQGGM++L+  D L+I 
Sbjct: 414 KIGNDLDLLEKDVFKFCWTVDFPMYELNEETGLIDFSHNPFSMPQGGMDALENQDPLTIN 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH +++M++AF   G   EVVE +FGG+  AF+ G PPHGG
Sbjct: 474 AYQYDIVCNGVELSSGAIRNHRADIMIKAFGIAGYGPEVVEEKFGGMLNAFRYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597
            A G+DRIVMLL    N+REV LFPM+Q   DLLMG+P+ V   + +EL ++  +  PKK
Sbjct: 534 SAPGVDRIVMLLADQPNIREVILFPMNQQAQDLLMGAPAEVDAMRWKELHIKPDLPKPKK 593


>gi|221632859|ref|YP_002522081.1| aspartyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221157011|gb|ACM06138.1| aspartyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 612

 Score =  644 bits (1662), Expect = 0.0,   Method: Composition-based stats.
 Identities = 258/595 (43%), Positives = 375/595 (63%), Gaps = 5/595 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           R  +CG+L    +G  V L GWVHR R HG +IFLD+RD YGITQVVANP   SA  E+A
Sbjct: 15  RYTTCGELRRQHIGRTVTLKGWVHRRRDHGRLIFLDLRDRYGITQVVANPAHSSAAHEVA 74

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+VL + G V++R   TIN  + TG+IE+ A +IEIL+ A+  P P+  E +  E
Sbjct: 75  EHVRAEYVLAVTGQVVARPEGTINPALSTGEIEVLADQIEILNPAKTPPFPIAEETDVDE 134

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R +YR+LDLRR  L +N++ R +++  +R  +   +F+E  TP+L  S+PEGARD++V
Sbjct: 135 SLRLEYRYLDLRRARLQRNLLLRHQVVRFIRHYLEERDFVEIETPMLIKSTPEGARDYVV 194

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQQ KQLLM +GFDRY+QIA C RDED R+DR P EF Q+D+EMS
Sbjct: 195 PSRIFPGHFYALPQSPQQLKQLLMVAGFDRYYQIARCMRDEDLRADRQP-EFTQIDLEMS 253

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +D+L  +E +   +FE F++    +  F R+ Y++A+RRYG+DKPDLR  + + +V
Sbjct: 254 FVDVEDVLELIEGLYTEMFERFASKPLQAKPFPRLTYEEAMRRYGSDKPDLRFGLEIDDV 313

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +  F ++ F VF  +L+       +A+P       R+  D++ E ARS G  GL ++  +
Sbjct: 314 SSVFQNTSFGVFRSVLAEGGVIRGFAVPGFADA-PRSQLDQLTEIARSFGAKGLVWLALQ 372

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D SG +    P+AK LN      +  RL    GD    +A       +     R H+ +
Sbjct: 373 QD-SGRLIARSPIAKFLNEDEIATLAQRLQAGPGDLVLLVADAEDTAATILGRLRLHVGR 431

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E  +I+ +   FCW++D P +EWNEEE++ +  H+PFT P+     +  +D   ++A  Y
Sbjct: 432 ERKLIDESVHAFCWVIDPPLFEWNEEEQRWEAMHHPFTSPRDEDLPILDSDPSKVRAKAY 491

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV +GFE+ +G IR H  EV  + FS +G     +E RFG L RAF+ G PPHGG+A G
Sbjct: 492 DLVADGFELGTGSIRIHRREVQNKIFSIMGYDDTEIERRFGHLLRAFEYGAPPHGGMAPG 551

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR +M+L G  ++REV  FP +Q   DL++G+PS ++  QLREL LR+V    +
Sbjct: 552 LDRTIMILAGESSLREVIAFPKNQRAQDLMLGAPSPLAERQLRELHLRVVYPEDQ 606


>gi|222525749|ref|YP_002570220.1| aspartyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|254781724|sp|B9LJ78|SYD_CHLSY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|222449628|gb|ACM53894.1| aspartyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 589

 Score =  644 bits (1662), Expect = 0.0,   Method: Composition-based stats.
 Identities = 252/594 (42%), Positives = 358/594 (60%), Gaps = 6/594 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEI 61
            YR+H+CG+L  +  G  V L+GWVHR R HG +IF+D+RD YGITQVV N       E+
Sbjct: 1   MYRSHTCGELRPAHAGQEVTLAGWVHRRRDHGDLIFIDLRDRYGITQVVFNSAHPTAHEV 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A++VRSE+VL + G V  R  E +N ++ TG+IEL A + ++L+ A   P+ +  E    
Sbjct: 61  AETVRSEYVLQVRGKVRIRPPEAVNPDLATGEIELEASEAQVLNPARTPPIYIAKEGGED 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           ES+R KYR+LDLRR+ + +N++ R R++  +R  + AE F+E  TPIL  S+PEGARD+L
Sbjct: 121 ESVRLKYRYLDLRRERMQRNLILRHRVVKFIRDFLDAEGFLEIETPILIKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ G FYALPQ+PQQ KQLLM +G+D+YFQIA CFRDED R+DR P EF QLDMEM
Sbjct: 181 VPSRLHPGKFYALPQSPQQLKQLLMVAGYDKYFQIARCFRDEDQRADRQP-EFTQLDMEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD+L+ +E +   +         +   F R+ Y +A+ RYG+DKPDLR  + + N
Sbjct: 240 SFVDQDDVLDLIERMFTALCRTVVPHKHLPTPFRRLSYAEAMERYGSDKPDLRYGLELVN 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++  + + F+VF  +L+     +    P      +R   D + +  R+ G  GLA+   
Sbjct: 300 LSDLLIETPFQVFRNVLNSGGQVKGIRAP-GCAHFSRKQIDELTDVVRAGGAKGLAWAVL 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D           AK+L      AI  R+  + GD    +A  P    +     R ++A
Sbjct: 359 PTDGG---EVRSSFAKNLAPGEFAAIVERMQAEAGDLLLIVADQPAVVAASLDKLRRNLA 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L + + N   F WI+DFP  EWNE+E++ D  H+PFT P+     L   D   ++A  
Sbjct: 416 ERLQLADPNTLCFAWIVDFPLVEWNEDEQRWDAVHHPFTAPKDEDMHLLATDPGKVRAKA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+ NG+E   G IR H  +V  Q FS +GIS+E  + +FG +  AF+ G PPHGGIA 
Sbjct: 476 YDLILNGYEAGGGSIRIHRRDVQQQIFSLLGISEEQAQAQFGHMLEAFEYGAPPHGGIAP 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GIDR+VM+L     +REV  FP +Q   DL+  +PS V   QL+EL +RIV   
Sbjct: 536 GIDRLVMILADEPTIREVMAFPKTQQAVDLMTNAPSPVDERQLKELHIRIVMPE 589


>gi|148264250|ref|YP_001230956.1| aspartyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|189082100|sp|A5G3L5|SYD_GEOUR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146397750|gb|ABQ26383.1| aspartyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 593

 Score =  644 bits (1661), Expect = 0.0,   Method: Composition-based stats.
 Identities = 239/593 (40%), Positives = 354/593 (59%), Gaps = 10/593 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEI 61
            RTH CG L   D+G  V L GW HR R HGG+IF+D+RD  G+ QVV +PD++    + 
Sbjct: 9   KRTHYCGALTAGDIGKEVVLMGWAHRRRDHGGLIFVDLRDREGLAQVVFDPDNSPAAHKK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++R+E+V+ I G V+ R   T+NAN+ TG++E+   + ++L+ ++ LP  +    +  
Sbjct: 69  AEAIRNEYVVAIRGKVIPRPDGTVNANLKTGEVEVLVSECKMLNRSKALPFTLDDYVDVA 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R K+R+LDLRR  L +N++ R+++    R  +    F+E  TP LT S+PEGARDFL
Sbjct: 129 ENLRLKHRYLDLRRPVLQENLILRSKVAQITRQYLTGNGFLELETPFLTKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N+G FYALPQ+PQ +KQ+LM SGFDRYFQ+  CFRDED R+DR P EF Q+D EM
Sbjct: 189 VPSRINRGEFYALPQSPQLFKQILMVSGFDRYFQVVRCFRDEDLRADRQP-EFTQIDCEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++++DI+  ME ++  +F E      V+    R+ Y ++IRR+G D PDLR  + +  
Sbjct: 248 SFIDREDIITVMEGLIARIFTETKGAT-VNLPIPRMTYAESIRRFGVDNPDLRFGLELVE 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++   ++ F+VF+ +++     +       GG  +R   D + E+A+  G  GLAY+  
Sbjct: 307 LSDIVKNAGFKVFADVVAGGGIVKGLNAKGCGG-MSRKEIDDLTEFAKIYGAKGLAYVKM 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                       P+AK        A+    D ++GD   F+A  P          RNH+A
Sbjct: 366 TA-----EGWQSPIAKFFTAEEISAMDKAFDAKEGDLLLFVADKPKVVNDSLGKLRNHLA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG+++ + F F WI DFP  EW+EEEK+    H+PFT P         +D    +A  
Sbjct: 421 KSLGLLDKDTFNFVWITDFPLLEWDEEEKRWAAVHHPFTAPMDEDLEYVESDPGRCRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  ++    F  +G S+E    +FG L  A   G PPHGGIA 
Sbjct: 481 YDLVLNGNEIGGGSIRIHQEKIQSLMFKMLGHSEEDARTKFGFLLDAMDYGAPPHGGIAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR++MLL G+ ++R+V  FP +Q    L+  +PS V ++QLRELGL+ V  
Sbjct: 541 GLDRLIMLLTGSDSIRDVIAFPKTQKGACLMSEAPSAVDMKQLRELGLKTVVK 593


>gi|238926284|ref|ZP_04658044.1| aspartyl-tRNA synthetase [Selenomonas flueggei ATCC 43531]
 gi|238885964|gb|EEQ49602.1| aspartyl-tRNA synthetase [Selenomonas flueggei ATCC 43531]
          Length = 598

 Score =  644 bits (1661), Expect = 0.0,   Method: Composition-based stats.
 Identities = 236/599 (39%), Positives = 351/599 (58%), Gaps = 11/599 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
             RTH CG L    VG  V L GWV R R HGG+IF+D+RD  G  Q+V +  +     F
Sbjct: 7   MKRTHGCGILRKEQVGEEVTLCGWVSRRRDHGGLIFVDMRDRSGFVQIVFDEAAMAEGTF 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+++RSE+VLC+ G V +RSAET+N N+ TG+IE+   ++ IL+ A+  P  +    +
Sbjct: 67  HEAETLRSEFVLCVRGTVRARSAETVNPNMATGEIEIVVSELRILNKAKTPPFYIQDGVD 126

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR +YR+LDLRR  +  N++ R R+   MR       F+E  TP+L  S+PEGARD
Sbjct: 127 VDEMIRLRYRYLDLRRPEMQANMILRHRVTKIMRDFFDRSGFLEIETPMLCKSTPEGARD 186

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR+N G FYALPQ+PQ +KQLLM SGF++YFQI  CFRDED R+DR P EF QLD+
Sbjct: 187 FLVPSRLNPGEFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQP-EFTQLDI 245

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++QD IL  ME +++ +FE+          F R+ +D+A+ R+G+DKPDLR  + +
Sbjct: 246 EMSFMDQDSILTLMEGMVKELFEKSIGAKI-ETPFQRMSWDEAMDRFGSDKPDLRFGMEL 304

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T++   S+F+VF+ ++      +V  +        R   D +  + +  G  GLA+I
Sbjct: 305 QDITDYVGGSDFKVFNAVMEAGGRVKVINVEGY-ANIPRRELDGLVSYVQGYGAKGLAWI 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +            P  K  +    E I+  +  + GD    +A  PL       + R  
Sbjct: 364 QYT-----EEGVKSPFKKFYSDETFETIKNAVGAKTGDLLLVVADQPLVVAQALGELRLE 418

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +  G+I+ +   F W++DFP +E++ EEK+    H+PFT P+        +D   +KA
Sbjct: 419 MGRRRGLIDPDALRFLWVVDFPMFEYSAEEKRYKAMHHPFTAPRDEDVPFLKSDPGRVKA 478

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G +R + S++  Q F  +G + E    RFG +  AF+ G PPHGG+
Sbjct: 479 NAYDMVLNGVEIGGGSLRIYSSDLQEQVFEALGFTPEEARARFGFMMNAFEYGTPPHGGL 538

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           A G+DR+VML+   +++R+V  FP +Q+  D++  +P+TV  +QLREL +R     KK 
Sbjct: 539 AFGLDRLVMLMAKRRSIRDVIAFPKTQSASDVMSEAPATVDEKQLRELYIRTAVPKKKA 597


>gi|326404837|ref|YP_004284919.1| aspartyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325051699|dbj|BAJ82037.1| aspartyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 595

 Score =  644 bits (1661), Expect = 0.0,   Method: Composition-based stats.
 Identities = 322/600 (53%), Positives = 413/600 (68%), Gaps = 9/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH CG L  +D G   RLSGWV+  R HGG++F+D+RDHYGITQ V    S  F 
Sbjct: 1   MHEYRTHDCGALRAADAGITARLSGWVNVKRDHGGLLFIDLRDHYGITQCVFPAGSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R E V+ + G V+ R A+T+N  + TG+IEL A+ +E+ S A+ LP+ V GE ++
Sbjct: 61  AAEVLRVESVITVTGRVVKRDADTVNPRLPTGEIELVAETVEVQSTADVLPIQVAGEAQF 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ LH+NI+ R  +I  +R  M A  F E +TPILTASSPEGARDF
Sbjct: 121 PEELRLRYRFLDLRREKLHRNIMLRANVIAWLRREMTARGFTEFTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPSRVHPGQFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEASRADRAPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+  T+E VL G+F EF  G +V+   F RI YD+A+ +YG+DKPDLRNP+++
Sbjct: 241 MSFVTQEDVFATIEPVLGGLFREFGGGRSVTQWPFPRIAYDEALLKYGSDKPDLRNPLLI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTE F  S F +F+KI++          P  GG   R+F D++N+WARS+G  GL YI
Sbjct: 301 TDVTEAFRDSGFGLFAKIVAGGGVVRAIPAPGTGGN-PRSFFDKLNDWARSEGAGGLGYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  D        GP+AK+L     EAIR       GD+ FF AG PL+   FA   R  
Sbjct: 360 IFAPD-----GAKGPIAKNLEPARAEAIREATGASVGDAVFFAAGKPLEAAKFAGTVRTK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +LG+I+   FEFCWI+DFP YE +EE  +I F+HNPF+MPQGG+E+L G D L+IKA
Sbjct: 415 LGTDLGLIDGAKFEFCWIVDFPMYERDEETGQIVFSHNPFSMPQGGLEALNGQDPLTIKA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           FQYD+VCNG E++SG IRNH  ++ML+AF   G   E VE RFGG+  AF+ G PPHGG 
Sbjct: 475 FQYDIVCNGVELSSGAIRNHRPDIMLRAFEIAGYGAEEVEARFGGMLNAFRYGAPPHGGS 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV--ENPKK 597
           A G+DR+VMLL    N+REV  FP++Q   DLLMG+P+ V   +L+EL L I     PKK
Sbjct: 535 APGVDRMVMLLADEPNLREVIAFPLNQQGQDLLMGAPAPVPAARLKELSLAIALPPAPKK 594


>gi|114326876|ref|YP_744033.1| aspartyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114315050|gb|ABI61110.1| aspartyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 603

 Score =  644 bits (1661), Expect = 0.0,   Method: Composition-based stats.
 Identities = 307/597 (51%), Positives = 404/597 (67%), Gaps = 9/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H CG L  +D G+  RLSGW+H  R HGG++F+D+RDHYG+TQ V    +  F 
Sbjct: 9   MHAYRSHDCGALRAADTGTEARLSGWIHSKRDHGGLLFIDLRDHYGLTQCVFASGTDIFA 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R E V+ + G V++R   T+N  + TG+IEL    +++ S AE LPL V G   Y
Sbjct: 69  TVEKLRPESVITVTGQVVARETGTVNPKLPTGEIELRVTALDVQSSAEVLPLQVAGTESY 128

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           P+ +R KYR++DLRR+ +H+N++ R ++I S+R RMI + F E  TPILTASSPEGARDF
Sbjct: 129 PDELRLKYRYIDLRRERVHRNMMLRAQVIASLRRRMIEQGFTEFQTPILTASSPEGARDF 188

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 189 LVPARLHPGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEASRADRSPGEFYQLDFE 248

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSN-GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSF  Q+D+   +E V+  VFEEFSN        F RI Y+ A+  YG+DKPDLRNP+ +
Sbjct: 249 MSFATQEDVFAALEPVMAQVFEEFSNGREVTKPPFPRIPYETAMLEYGSDKPDLRNPLRI 308

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VT  F  S F +F+KI +        AIPA G  GN R+F D++N+WAR++G  GL Y
Sbjct: 309 TDVTAQFDGSGFGLFAKIAASGGIVR--AIPAPGAAGNPRSFFDKLNDWARAEGAGGLGY 366

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +           GP+A++L     EAIR    +Q GD+ FF AG  L+   FA   R 
Sbjct: 367 IIFDA-----EGPKGPIARNLEPERAEAIRQACGLQAGDAVFFAAGQKLEAAKFAGAVRT 421

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + QEL +I  N F FCWI+DFP YE NEE  +IDF+HNPF+MPQGG+++L   D L+IK
Sbjct: 422 RLGQELNLIAQNEFRFCWIIDFPMYELNEETGQIDFSHNPFSMPQGGLDALDNQDPLTIK 481

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH  ++M++AF   G     VE RFGG+  AF+ G PPHGG
Sbjct: 482 AYQYDIVCNGIELSSGAIRNHRPDLMIRAFEIAGYPASEVEARFGGMLNAFRYGAPPHGG 541

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            A GIDR+VMLL    N+REV LFP++Q   DL+MG+P+ V   +L+EL LRI + P
Sbjct: 542 AAPGIDRMVMLLADEPNIREVILFPLNQQGEDLMMGAPAEVEPARLKELSLRIEKPP 598


>gi|52081234|ref|YP_080025.1| aspartyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52786614|ref|YP_092443.1| aspartyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|62287542|sp|Q65GR4|SYD_BACLD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|52004445|gb|AAU24387.1| aspartyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52349116|gb|AAU41750.1| AspS [Bacillus licheniformis ATCC 14580]
          Length = 592

 Score =  644 bits (1661), Expect = 0.0,   Method: Composition-based stats.
 Identities = 241/596 (40%), Positives = 349/596 (58%), Gaps = 10/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+ CG++    +G  V L GWV + R  GG+IF+D+RD  GI QVV NPD      E A
Sbjct: 4   RTYYCGEITEKAIGETVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKDALETA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           +S+RSE+VL I G V++R   T+N N+ TG+IE+ A+ +++LS A+  P  +  +  E  
Sbjct: 64  ESIRSEYVLDITGKVVAREEATVNPNLKTGRIEIQAESVDVLSAAKTPPFAISDQAAEVS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR K+R+LDLRR  +  ++  R  +  ++R  +    F++  TP+LT S+PEGARD+L
Sbjct: 124 EDIRLKHRYLDLRRPEMFNSLKMRHNVTKAVRRFLDDNGFLDIETPVLTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQIFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI+   E ++  V  E       S    R+ Y+DA+ RYG+DKPD R  +++ +
Sbjct: 243 SFMSQEDIMKLSEEMMAHVMRETHGIEI-SLPLPRMSYEDAMNRYGSDKPDTRFGMLLTD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V+E    S+F+VF+  ++     +   +       +R   D + E+A + G  GLA++  
Sbjct: 302 VSEAVKDSDFKVFASAVANGGAVKAINVKGAAANYSRKDIDALGEFAANYGAKGLAWLKT 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK       EA+   LD  DGD   F+A             R  + 
Sbjct: 362 EAD-----GLKGPIAKFFAGEKQEALVQALDAADGDLLLFVADKLEVANDALGALRLKLG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL +I+ + F F W++D+P  E++ EE +   AH+PFTMP      L   +   +KA  
Sbjct: 417 KELNLIDESLFNFLWVVDWPLLEYDAEEGRYYAAHHPFTMPVREDLKLIETNPQDMKAQA 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+  G IR    +V  + F  +G S+E  + +FG L  AF  G PPHGGIA 
Sbjct: 477 YDLVLNGYELGGGSIRIFEKDVQEKMFGLLGFSEEEAKEQFGFLLEAFDYGAPPHGGIAL 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VMLL G  N+R+   FP + +   L+  +PS V   QL EL L I    ++
Sbjct: 537 GLDRLVMLLSGRTNLRDTIAFPKTASASCLMTEAPSEVDNAQLDELHLEIKRKIRQ 592


>gi|229086966|ref|ZP_04219123.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696342|gb|EEL49170.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 591

 Score =  644 bits (1661), Expect = 0.0,   Method: Composition-based stats.
 Identities = 231/595 (38%), Positives = 345/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+   K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGPGAINDNMATGRIEVHGAKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  ++R  + +E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMYNTFKMRHDVTKTIRNFLDSEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHEGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL  ME ++  V ++       +  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILEMMERMMTKVMKDAKGVEVHA-PFPRMKYADAMARYGSDKPDTRFAMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +        G  +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAAGKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMSTLEAAPGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTDAPSPVAEAQLEELYLQLNVKKEK 591


>gi|304407554|ref|ZP_07389206.1| aspartyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304343505|gb|EFM09347.1| aspartyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 602

 Score =  644 bits (1660), Expect = 0.0,   Method: Composition-based stats.
 Identities = 245/594 (41%), Positives = 356/594 (59%), Gaps = 12/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           +THSCG L  ++VG  V L+GWV R R  GG++F+D+RD  GI Q V NPD   A  EIA
Sbjct: 4   KTHSCGTLTKANVGETVTLNGWVQRRRDLGGVLFIDLRDRTGIVQTVFNPDFSGAALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              R+E+VL + G V+ R  ET NAN+ TG+IE+   +IEI++ A+  P P+    E  E
Sbjct: 64  DKARNEFVLALRGTVVERDQETYNANLATGEIEIRVTEIEIMNAAKTPPFPIEDGVEVDE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           SIR K+R+LDLRR  + + ++ R++     R  +  E F++  TPILT S+PEGARD+LV
Sbjct: 124 SIRLKHRYLDLRRPEMQRTMLLRSKASKVFRDFLDGEGFLDVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+   F+ALPQ+PQ +KQLLM  G +RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHAEEFFALPQSPQIFKQLLMVGGLERYYQIARCFRDEDLRADRQP-EFTQVDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD +L  ME ++  VF E          F RI Y +A+ +YG+DKPDLR  + + N+
Sbjct: 243 FLSQDQLLAMMEQLMARVFRETIGYEI-PLPFQRITYAEAMDKYGSDKPDLRFGLEIKNI 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFW 361
           T+   +S+ +VF+ + +     +  A+ AKG    +R   D +  +A   G  GLA+I  
Sbjct: 302 TDIVANSDVKVFASVAASGGEVK--ALNAKGCASWSRKELDDLQPFAARYGGKGLAWITV 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +  E       GP+ K L     +A+  RL++++GD   F A  P        + R  + 
Sbjct: 360 KDGE-----WRGPIVKFLKPEEIQALTARLEVEEGDLLTFSADKPKVVADVLGNLRLKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++LG+I+ + ++F W++DFP  EW+E+ K+    H+PFT P      L   D   ++A  
Sbjct: 415 RDLGLIDESQYKFLWVVDFPLLEWDEDAKRYVAMHHPFTRPNEEDLELLATDPGKVRAQA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  +V    F  +G S E    +FG L  AF+ G PPHGGIA 
Sbjct: 475 YDIVLNGYEVGGGSMRIYKRDVQELMFKTLGFSMEQAHEQFGFLLDAFEYGTPPHGGIAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR+VMLL G  N+RE   FP + +  DL++ +PS V + QL +L +R V  P
Sbjct: 535 GLDRLVMLLTGRTNLRETIAFPKTASATDLMVDAPSQVELSQLEQLHIRTVPKP 588


>gi|256004299|ref|ZP_05429281.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281418007|ref|ZP_06249027.1| aspartyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|255991733|gb|EEU01833.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281409409|gb|EFB39667.1| aspartyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316939957|gb|ADU73991.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 595

 Score =  644 bits (1660), Expect = 0.0,   Method: Composition-based stats.
 Identities = 238/590 (40%), Positives = 346/590 (58%), Gaps = 9/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEI 61
            RTH C +L V+DVG  V + GW H+ R  GG+IF+ +RD  GI QVV +   +S  F  
Sbjct: 9   KRTHMCAELTVNDVGKTVTVMGWCHKSRNLGGLIFVTLRDRTGIIQVVFDNTVNSELFAK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +R E+VL + G V+ RS E IN  + TG+IE+ A+++ ILS AE  P+ +  + +  
Sbjct: 69  AEGIRGEYVLAVVGEVVKRSPEAINPKLPTGEIEIIAKELRILSTAETPPIYIEEDSDVN 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R KYR+LDLRR  + +N++ R R+    R       FIE  TP+LT S+PEGARD+L
Sbjct: 129 EATRLKYRYLDLRRPDMQRNLMLRHRVAKIARDYFDEHGFIEIETPMLTKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G F+ALPQ+PQ +KQLLM +GFDRY QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 189 VPSRVHPGKFFALPQSPQLFKQLLMVAGFDRYMQIVKCFRDEDLRADRQP-EFTQIDLEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV  +D+L   E  ++ VF+E  N + +   F+R+ Y +A+ R+GTDKPD+R    + N
Sbjct: 248 SFVNVEDVLTINEGFIKRVFKEAINVD-LEIPFIRMPYKEAMERFGTDKPDIRFGFELVN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++   +  F+VFS  +              G   +R   D + E+ ++ G  G+A+I  
Sbjct: 307 LSDLVENCGFKVFSDAVKNGGSVRAINAKGCGNKFSRKEIDALGEFVKTYGAKGMAWIVV 366

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+ K       +A+  R+  + GD   FIA             R  IA
Sbjct: 367 -----GENEHKSPITKFFTEDEIKAVLTRMRAEPGDLICFIADKNEVVFDSLGQLRVEIA 421

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++LG+++   F+F W+ +FP  E++EEEK+    H+PFT P      L   D L ++A  
Sbjct: 422 RKLGLLDNKEFKFLWVTEFPLLEYDEEEKRYVAKHHPFTSPMDEDVELLDTDPLKVRAKA 481

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  E+  + F  +G S++   +RFG L  AF+ G PPHGG+A 
Sbjct: 482 YDIVLNGTEIGGGSIRIHSQELQSKMFKLLGFSEKDAWDRFGFLLEAFKYGTPPHGGMAF 541

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VML+ G  ++R+V  FP  QN   L+  +P  V  +QL EL +R+
Sbjct: 542 GLDRLVMLMAGRNSIRDVIAFPKVQNSSCLMTNAPDEVEPKQLEELKIRV 591


>gi|327439657|dbj|BAK16022.1| aspartyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 590

 Score =  644 bits (1660), Expect = 0.0,   Method: Composition-based stats.
 Identities = 228/594 (38%), Positives = 340/594 (57%), Gaps = 8/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACFEIAK 63
           RTH+CG +  ++ G  V L GWV + R  GG+IF+D+RD  GI QVV  +      E+A 
Sbjct: 4   RTHACGLVTAAEAGQEVVLKGWVQKRRDLGGLIFVDMRDREGIVQVVFGDQAKDALELAN 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+V+ + G V+ R A  IN N+ TG+IE+ A ++ I++ A+  P  +    E  E 
Sbjct: 64  KIRNEFVIEVKGTVVLRDASQINKNMKTGEIEVVASELTIINEAKNPPFAIDNNAEVSEE 123

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  ++     R+ +  ++R  +  E F+E  TPILT S+PEGARD+LVP
Sbjct: 124 LRLKYRYLDLRRPVMYDTFKMRSDVTRTIRNFLQNEGFLEVETPILTKSTPEGARDYLVP 183

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM  GF++YFQIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 184 SRVHDGEFYALPQSPQLFKQLLMVGGFEKYFQIARCFRDEDLRADRQP-EFTQVDIETSF 242

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D+I+   E +L  V ++    + V   F R+ Y +A+ R+G+DKPD+R  + +  ++
Sbjct: 243 LSMDEIIEMNERLLTQVMKDVKGID-VVTPFPRMSYKEAMDRFGSDKPDVRFGLELKQLS 301

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +    S F VF+  ++     +   +       +R   D + E+A   G  GLA++    
Sbjct: 302 DIVKESAFGVFANAVANGGEVKAINVKGAAANYSRKDIDALGEFAGRYGAKGLAWLKVT- 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
                    GP+AK       + I    + Q GD   F+A             R  + +E
Sbjct: 361 ----EEGLNGPIAKFFEGEAADTIIQATEAQAGDLLLFVADKSSVVADALGALRLKLGKE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+I+ + FEF WI+D+P +E++E E +   AH+PFT P      L   +   ++A  YD
Sbjct: 417 LGLIDESKFEFLWIVDWPLFEYDEAEGRYYAAHHPFTRPFDEDLELMNTNPKEVRAQAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R +  ++  + F  +G ++E    +FG L  AF  G+PPHGG+A G+
Sbjct: 477 IVLNGYELGGGSLRIYEPDLQAKMFELLGFTEEEARAQFGFLLEAFDYGVPPHGGLAMGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+VMLL G  N+R+   FP +     LL  +PS VS  QL EL LRI    KK
Sbjct: 537 DRLVMLLAGRTNLRDTIAFPKTATASCLLTDAPSQVSDAQLEELSLRIAATAKK 590


>gi|254449028|ref|ZP_05062482.1| aspartyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198261422|gb|EDY85713.1| aspartyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 592

 Score =  644 bits (1660), Expect = 0.0,   Method: Composition-based stats.
 Identities = 236/591 (39%), Positives = 350/591 (59%), Gaps = 5/591 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  S +   V + GWVHR R HGG+IF+D+RDH G+ QVV +PD+   F  A+
Sbjct: 3   RSHYCGQVTESLLDQEVEVCGWVHRRRDHGGVIFVDLRDHTGLLQVVFDPDNPEMFAQAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+VL I G V  R   T+N N+ TGQ+E+ A ++E+L+ A   P  +  E +  E 
Sbjct: 63  RIRNEFVLKIKGRVRRRPEGTVNDNLPTGQVEVFALELEVLNAAATPPFQIDDE-DINED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR++DLRR  + + +  R ++ + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 122 NRLRYRYIDLRRPQMQERLRLRAKVSHFLRNFLEHNEFLDLETPMLTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 182 SRVHPGEFFALPQSPQLFKQLLMMSGMDRYYQIVRCFRDEDLRADRQP-EFTQLDIEMSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++DI+  ME ++ G+F+E    + +  +F R+ Y +A+ R+G+DKPDLR  + + ++T
Sbjct: 241 IDEEDIMGLMEQMMVGLFKETMGVD-LPASFERMPYAEAMERFGSDKPDLRIDLELISIT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G        +G   +R   D   ++    G  GLAYI    
Sbjct: 300 DLMKDVEFKVFSGPANDPKGRIAALRVPQGASISRKEIDDYTKFVSRYGAKGLAYIKCNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K L      AI  R   QDGD  FF A             R  + ++
Sbjct: 360 VAAGREGLQSPILKFLPDEVVSAIIERTGAQDGDIVFFGADKAKVVNDALGALRVKLGED 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+I    + F W++DFP +E++++E +    H+PFT P     +   +D  +  +  YD
Sbjct: 420 LGLIQAG-WRFLWVVDFPMFEYDDKEGRYHALHHPFTAPLVDSPAALKDDAENALSRAYD 478

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG E+  G IR H  E+   A   +GI ++  E +FG L  A + G PPHGGIA G+
Sbjct: 479 LVLNGTELGGGSIRIHTPEMQQAALDALGIDEQEAEEKFGFLLSALKYGCPPHGGIAFGL 538

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR+VMLL GA ++R+V  FP +Q+   LL  +PS VS  QLREL +R+ + 
Sbjct: 539 DRMVMLLSGASSIRDVMAFPKTQSASCLLTEAPSAVSEAQLRELSIRLRKP 589


>gi|163847874|ref|YP_001635918.1| aspartyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|229470559|sp|A9WGJ7|SYD_CHLAA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|163669163|gb|ABY35529.1| aspartyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
          Length = 589

 Score =  644 bits (1660), Expect = 0.0,   Method: Composition-based stats.
 Identities = 252/594 (42%), Positives = 359/594 (60%), Gaps = 6/594 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEI 61
            YR+H+CG+L  +  G  V L+GWVHR R HG +IF+D+RD YGITQVV N       E+
Sbjct: 1   MYRSHTCGELRPAHAGQEVTLAGWVHRRRDHGDLIFIDLRDRYGITQVVFNSAHPTAHEV 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A++VRSE+VL + G V  R  E +N ++ TG+IEL A + ++L+ A   P+ +  E    
Sbjct: 61  AETVRSEYVLQVRGKVRIRPPEAVNPDLATGEIELEASEAQVLNPARTPPIYIAKEGGED 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           ES+R KYR+LDLRR+ + +N++ R R++  +R  + AE F+E  TPIL  S+PEGARD+L
Sbjct: 121 ESVRLKYRYLDLRRERMQRNLILRHRVVKFIRDFLDAEGFLEIETPILIKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ G FYALPQ+PQQ KQLLM +G+D+YFQIA CFRDED R+DR P EF QLDMEM
Sbjct: 181 VPSRLHPGKFYALPQSPQQLKQLLMVAGYDKYFQIARCFRDEDQRADRQP-EFTQLDMEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD+L+ +E +   +         +   F R+ Y +A+ RYG+DKPDLR  + + N
Sbjct: 240 SFVDQDDVLDLIERMFTALCRTVVPHKHLPTPFRRLSYAEAMERYGSDKPDLRYGLELVN 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++  + + F+VF  +L+     +    P      +R   D + +  R+ G  GLA+   
Sbjct: 300 LSDLLIETPFQVFRNVLNSGGQVKGIRAP-GCAHFSRKQIDELTDVVRAGGAKGLAWAVL 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D           AK+L      AI  R+  + GD    +A  P    +     R ++A
Sbjct: 359 PTDGG---EVRSSFAKNLAPGEFAAIVERMQAEAGDLLLIVADQPAVVAASLDKLRRNLA 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L + + N   F WI+DFP  EWNE+E++ D  H+PFT P+     L   D   ++A  
Sbjct: 416 ERLQLADPNTLCFAWIVDFPLVEWNEDEQRWDAVHHPFTAPKDEDMHLLATDPGKVRAKA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+ NG+E   G IR H  +V  Q FS +GIS+E+ + +FG +  AF+ G PPHGGIA 
Sbjct: 476 YDLILNGYEAGGGSIRIHRRDVQQQIFSLLGISEELAQAQFGHMLEAFEYGAPPHGGIAP 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GIDR+VM+L     +REV  FP +Q   DL+  +PS V   QL+EL +RIV   
Sbjct: 536 GIDRLVMILADEPTIREVMAFPKTQQAVDLMTNAPSPVDERQLKELHIRIVMPE 589


>gi|125973846|ref|YP_001037756.1| aspartyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|125714071|gb|ABN52563.1| aspartyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
          Length = 595

 Score =  644 bits (1660), Expect = 0.0,   Method: Composition-based stats.
 Identities = 238/590 (40%), Positives = 346/590 (58%), Gaps = 9/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEI 61
            RTH C +L V+DVG  V + GW H+ R  GG+IF+ +RD  GI QVV +   +S  F  
Sbjct: 9   KRTHMCAELTVNDVGKTVTVMGWCHKSRNLGGLIFVTLRDRTGIIQVVFDNTVNSELFAK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +R E+VL + G V+ RS E IN  + TG+IE+ A+++ ILS AE  P+ +  + +  
Sbjct: 69  AEGIRGEYVLAVVGEVVKRSPEAINPKLPTGEIEIIAKELRILSTAESPPIYIEEDSDVN 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R KYR+LDLRR  + +N++ R R+    R       FIE  TP+LT S+PEGARD+L
Sbjct: 129 EATRLKYRYLDLRRPDMQRNLMLRHRVAKIARDYFDEHGFIEIETPMLTKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G F+ALPQ+PQ +KQLLM +GFDRY QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 189 VPSRVHPGKFFALPQSPQLFKQLLMVAGFDRYMQIVKCFRDEDLRADRQP-EFTQIDLEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV  +D+L   E  ++ VF+E  N + +   F+R+ Y +A+ R+GTDKPD+R    + N
Sbjct: 248 SFVNVEDVLTINEGFIKRVFKEAINVD-LEIPFIRMPYKEAMERFGTDKPDIRFGFELVN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++   +  F+VFS  +              G   +R   D + E+ ++ G  G+A+I  
Sbjct: 307 LSDLVENCGFKVFSDAVKNGGSVRAINAKGCGNKFSRKEIDALGEFVKTYGAKGMAWIVV 366

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+ K       +A+  R+  + GD   FIA             R  IA
Sbjct: 367 -----GENEHKSPITKFFTEDEIKAVLTRMRAEPGDLICFIADKNEVVFDSLGQLRVEIA 421

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++LG+++   F+F W+ +FP  E++EEEK+    H+PFT P      L   D L ++A  
Sbjct: 422 RKLGLLDNKEFKFLWVTEFPLLEYDEEEKRYVAKHHPFTSPMDEDVELLDTDPLKVRAKA 481

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  E+  + F  +G S++   +RFG L  AF+ G PPHGG+A 
Sbjct: 482 YDIVLNGTEIGGGSIRIHSQELQSKMFKLLGFSEKDAWDRFGFLLEAFKYGTPPHGGMAF 541

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VML+ G  ++R+V  FP  QN   L+  +P  V  +QL EL +R+
Sbjct: 542 GLDRLVMLMAGRNSIRDVIAFPKVQNSSCLMTNAPDEVEPKQLEELKIRV 591


>gi|46581768|ref|YP_012576.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|62287574|sp|Q725Q7|SYD_DESVH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|46451191|gb|AAS97836.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311232327|gb|ADP85181.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 610

 Score =  643 bits (1659), Expect = 0.0,   Method: Composition-based stats.
 Identities = 242/595 (40%), Positives = 354/595 (59%), Gaps = 14/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTHSC +L  +DVG+ V + GWV   R HGG+IF+D+RD  G+TQVV +PD      + A
Sbjct: 24  RTHSCCELTAADVGNDVCIMGWVQYRRDHGGLIFVDLRDRKGLTQVVFSPDFAPEAHKDA 83

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VRSE+VL I G V  R     N  + TG+IE+   + ++L+ ++  P  +    E  E
Sbjct: 84  HIVRSEYVLAIRGRVRPRPEGMTNPGMKTGEIEVVVSEWKLLNTSKTPPFLIEDRTEASE 143

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R  +R+LDLRR  + +N + R R   S R  +   +F+E  TP LT ++PEGARDFLV
Sbjct: 144 NLRLAWRYLDLRRPRMARNFMLRHRAAQSARRYLDELDFLEIETPYLTKATPEGARDFLV 203

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR   EF Q+D+EMS
Sbjct: 204 PSRLNHGMFYALPQSPQIFKQLLMVSGMDRYYQIVRCFRDEDMRADRQL-EFTQIDIEMS 262

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ +++  E ++  V ++    + V+  F R+ YD A+  YG DKPD R  + + +V
Sbjct: 263 FVDEERVMSMAEGLMSRVMKDTLGVD-VTVPFPRMTYDQAMGEYGVDKPDTRFDLRLKDV 321

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+    SEF++F+K   V            G    R   D   E+ +  G  GLA+I  R
Sbjct: 322 TDAVRGSEFKLFAKAPLVK-----AMRVPGGETMTRKEIDEFTEFVKIYGAQGLAWIKIR 376

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E        P+AK L+     A+   L ++ GD  FF AG+P    +   + R  + Q
Sbjct: 377 EGE-----WQSPIAKFLSEAERAALVAALGLEVGDIVFFQAGEPGMVNAALGNLRVKLGQ 431

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            LG+I  + + F W+ DFP +E++EEEK+    H+PFT P+ G   L  +D  + +A  Y
Sbjct: 432 HLGLIPEDTYNFLWVTDFPLFEYDEEEKRYVACHHPFTSPKDGHFDLMTSDPAAARARAY 491

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H +EV  + F+ +G+  +  E +FG L +A + G PPHGGIA G
Sbjct: 492 DMVLNGYELGGGSIRIHSAEVQRRMFAALGLDPQEAEEKFGFLIQALEHGAPPHGGIAFG 551

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G+ ++R+V  FP +Q    L+  +P  VS  QLR+LG+R+ E P++
Sbjct: 552 MDRLVMLLTGSPSIRDVIAFPKTQKATCLMTQAPDAVSARQLRDLGIRLRETPQE 606


>gi|56695828|ref|YP_166179.1| aspartyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|62287519|sp|Q5LUX6|SYD_SILPO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56677565|gb|AAV94231.1| aspartyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 593

 Score =  643 bits (1659), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/594 (55%), Positives = 425/594 (71%), Gaps = 6/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C  L  ++VG  VRLSGWVHRVR HGG++F+D+RDHYG+TQV+ + DSA F 
Sbjct: 1   MHAYRSHTCAALTAANVGETVRLSGWVHRVRDHGGVLFIDLRDHYGVTQVLCDGDSAAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R A+ +N  + TG+IE+  +++E+L  AEELPL VFG++EY
Sbjct: 61  ALEKVRSEWCIRIDGTVKARDADLVNPKLPTGEIEVYVRELEVLGRAEELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ +  N+  R+ ++ SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREAMQANMTLRSDVVASMRRRMWDKGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGRFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN--TVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q D+ +T+  VL GVFEEF  G       ++ +I Y DA + YGTDKPDLRNPI 
Sbjct: 241 MSFVTQQDVFDTIAPVLAGVFEEFGGGRKVDAPQDWPQIAYADAAKWYGTDKPDLRNPIK 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M + +EHF  S F +F+K+L      E+ AIPA  GG +R FCDRMN +A+ +G PG+ Y
Sbjct: 301 MQDCSEHFRGSGFAIFAKLLEQEGT-EIRAIPAPTGG-SRKFCDRMNAFAQKEGLPGMGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           IFWR    G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F   A  AR+
Sbjct: 359 IFWRDQGEG-LEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPKSFEKVAGKARD 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I  ELG+   + F F WI+DFP YE +EE  +IDF HNPF+MPQGGME+L G D ++++
Sbjct: 418 VIGAELGLTETDRFAFAWIVDFPIYERDEETGEIDFEHNPFSMPQGGMEALNG-DPMAVR 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            +QYDL CNG+E+ SG IRNH  E+ML+AF   G   + V+ RFG L+ AF  G PPHGG
Sbjct: 477 GYQYDLACNGYELVSGAIRNHKPEIMLKAFELAGYGADEVKARFGALFNAFHYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            AAGIDRIVMLL    N+REV +FPM+Q   DL+M +PS  S +QL ELGLR++
Sbjct: 537 CAAGIDRIVMLLADEANIREVMMFPMNQRAEDLMMQAPSEPSSDQLMELGLRVI 590


>gi|307823991|ref|ZP_07654218.1| aspartyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307734775|gb|EFO05625.1| aspartyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 596

 Score =  643 bits (1659), Expect = 0.0,   Method: Composition-based stats.
 Identities = 225/594 (37%), Positives = 350/594 (58%), Gaps = 5/594 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG+L    +G  V + GWVHR R HGG+IF+D+RD  G+ QVV +PD +  F  A+
Sbjct: 2   RTHKCGELNTQQLGETVSICGWVHRRRDHGGVIFIDLRDRAGLVQVVIDPDMADTFATAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVRSE+VL I GLV  R   T+NAN+ +G IE+ A+ I +L+ +E  P PV  E E  E 
Sbjct: 62  SVRSEYVLQITGLVRHRPEGTVNANMHSGAIEILAKDIVVLNESETPPFPVESEIEVNEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR++DLRR  + + +  R  +   +R  +    F E  TP LT ++PEGARD++VP
Sbjct: 122 LRLRYRYIDLRRTVMQEKMKVRRDVTRVLRNFLDDNEFFEIETPYLTKATPEGARDYIVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++ SF+ALPQ+PQ YKQ+LM +G DRY+Q+  CFRDED R+DR P EF QLD+E SF
Sbjct: 182 SRTHENSFFALPQSPQLYKQMLMVAGMDRYYQVVRCFRDEDLRADRQP-EFTQLDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++++I++ ME ++R +F +    N     F R+ + +A+ RYG D+PDLR P+ + ++ 
Sbjct: 241 MDENEIMHIMEEMIRQLFIKVIGVNLGDK-FPRMTHQEAVSRYGVDRPDLRIPLELVDIA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E     +F+VFS   +   G  V       G  +R   D + ++    G  GLAYI    
Sbjct: 300 EDMKDVDFKVFSAPANDPKGRVVAMRVPNAGDLSRKDIDALTKYVSIYGARGLAYIKVND 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K       +++  +   Q+GD  FF A             R  +  +
Sbjct: 360 LAAGVDGLQSPIVKFAPAEVWDSVLAKTGAQNGDLIFFGADKAGIVNEAMGALRVKLGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++  + ++  W++DFP ++W+E+ ++ +  H+PFT P   +E L  N   +  +  YD
Sbjct: 420 LNLLQGD-WKPVWVIDFPMFDWDEKSQRWNAIHHPFTAPSCSVEELVAN-PGAALSRAYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG E+  G IR + + +       +GI ++    +FG L  A + G PPHGG+A G+
Sbjct: 478 LVLNGTEVGGGSIRINRTSMQQTVLEILGIGEDEAREKFGFLLDALKYGAPPHGGLAFGL 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+VML+ G+ ++R+V  FP +Q+    L+ +P+ V+ EQL+ELG+R+++   K
Sbjct: 538 DRLVMLMTGSTSIRDVIAFPKTQSAACPLVSAPAVVTDEQLKELGIRLIKPAGK 591


>gi|56477896|ref|YP_159485.1| aspartyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|62287525|sp|Q5P280|SYD_AZOSE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56313939|emb|CAI08584.1| Aspartyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 599

 Score =  643 bits (1659), Expect = 0.0,   Method: Composition-based stats.
 Identities = 225/600 (37%), Positives = 347/600 (57%), Gaps = 6/600 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG +  +D+   V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 2   RTHYCGQVTAADLDQTVTLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAETFHTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+V+ + G V  R A T N N+++G+IE+    +E+L+ +   P  +  +    E+
Sbjct: 62  SIRNEFVIELTGKVRRRPAGTENPNLVSGEIEVLCHTLEVLNASATPPFQLDDDNLS-EN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R  +R +DLRR  + KN++ R ++  + R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTHRVIDLRRPQMQKNLMLRYKVAMAFRRFLDAQGFIDVETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ +I   ME+++R VF E      + N F R+ + +A+RRYG+DKPDLR  + + +VT
Sbjct: 240 LDEAEITAIMEDMIRYVFREALAVE-LPNPFPRMTHAEAMRRYGSDKPDLRVTLELTDVT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR- 362
           +      F+VFS   +         +P  G    R   D   ++    G  GLAYI    
Sbjct: 299 DAVQDVAFKVFSGPATSGGRVAALRVP-GGASLTRGEIDEYTKFVGIYGARGLAYIKVND 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + +  +     P+ K+L+      I  R   + GD  FF A             R  +  
Sbjct: 358 VTKPNDEGLQSPIVKNLHEEALRTILERTGAESGDLIFFGADKTKVVNDALGALRTKLGH 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E G ++   +   W++DFP +E+++E K+    H+PFT P+     L  +      A  Y
Sbjct: 418 EKGYVSGAAWTPVWVVDFPMFEYDDESKRWVACHHPFTAPKDEHVELLESAPGECLAKAY 477

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL  NG+EI  G +R H +++  + F  + I  E  + +FG L  A + G PPHGG+A G
Sbjct: 478 DLALNGWEIGGGSVRIHRADMQSKVFRALNIGDEEAQLKFGFLLDALKYGAPPHGGLAFG 537

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           +DR+V L+ GA+++R+V  FP +Q    LL  +P  V  +QLREL +R+ +  +  ++++
Sbjct: 538 LDRVVTLMTGAESIRDVIAFPKTQRAQCLLTDAPGEVDDKQLRELHIRLRQKIETQVEVA 597


>gi|322420289|ref|YP_004199512.1| aspartyl-tRNA synthetase [Geobacter sp. M18]
 gi|320126676|gb|ADW14236.1| aspartyl-tRNA synthetase [Geobacter sp. M18]
          Length = 594

 Score =  643 bits (1659), Expect = 0.0,   Method: Composition-based stats.
 Identities = 236/593 (39%), Positives = 342/593 (57%), Gaps = 10/593 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
            RT  CG+L    +G  V L GWV + R HGG+IF+D+RD  GI QVV +P+      AK
Sbjct: 9   KRTSYCGELRGDHIGREVVLMGWVSKRRDHGGLIFVDLRDRDGIAQVVFDPERCAEAHAK 68

Query: 64  S--VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +   R+E+VL I G V++R   T+N  + TG++E+   + ++L+ ++ LP  + G  +  
Sbjct: 69  AEGARNEYVLAIKGTVIARPEGTVNPKMKTGEVEVLVNECKLLNPSKALPFTLDGFVDVN 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLR   L +N++ R+++    R  +    F+E  TP LT S+PEGARDFL
Sbjct: 129 ENIRLKYRYLDLRTGQLQQNMILRSKVAQLTRSYLTDNGFLELETPFLTKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N+G FYALPQ+PQ +KQ+LM SGFDRYFQ+  CFRDED R+DR P EF Q+D EM
Sbjct: 189 VPSRINKGEFYALPQSPQLFKQILMVSGFDRYFQVVRCFRDEDLRADRQP-EFTQIDCEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++++DI+  ME ++  +F E      V     R+ Y +AIRR+G D PDLR  + +  
Sbjct: 248 SFIDREDIITVMEGLMARIFSEARGVK-VELPIQRMTYQEAIRRFGVDNPDLRFGLELVE 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    S F+VF+ ++      +   +    G  +R   D + E+A+  G  GLAY+  
Sbjct: 307 LSDIVKDSGFKVFADVVKGGGIVKGMNVK-GAGAMSRKEIDDLTEFAKIYGAKGLAYVKM 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                       P+AK         +       +GD   F+A  P          RNH+A
Sbjct: 366 TA-----EGWQSPIAKFFTPEEIATMDQAFGAVEGDLLLFVADKPKVVNDSLGKLRNHLA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            ++G+ + N F F WI DFP  EW+EEEK+    H+PFT P         +D    +A  
Sbjct: 421 AKMGLTDPNEFRFVWITDFPLLEWDEEEKRWAAVHHPFTAPMDEDLQYVESDPGRCRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  EV    F  +G+S+E   ++FG L  A + G PPHGGIA 
Sbjct: 481 YDLVLNGNEIGGGSIRIHQEEVQSLMFKMLGLSEENARSKFGFLLDALEYGTPPHGGIAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR++ML+ G+ ++R+V  FP +Q    L+  +PS V   QLR+LG+R+   
Sbjct: 541 GLDRLMMLITGSDSIRDVIAFPKTQKGACLMSEAPSGVDPLQLRDLGIRLAAK 593


>gi|296284766|ref|ZP_06862764.1| aspartyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 606

 Score =  643 bits (1658), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/598 (54%), Positives = 419/598 (70%), Gaps = 9/598 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C  L  S+VG  VRLSGWVHR R HGG++F+D+RDHYGITQ+VA+ DS    
Sbjct: 1   MHAYRTHTCAQLRESNVGETVRLSGWVHRKRDHGGVLFIDLRDHYGITQIVADEDSEALS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +  S++SE V+ IDG+V +RS ET NAN+ TG IE+ A+   + S+AEELPLPV GE+EY
Sbjct: 61  LLDSLKSESVITIDGVVKARSQETRNANLPTGDIEVFAKSATVQSMAEELPLPVAGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR KYRF+DLRR+ +H NI+ R ++I S+R RMI + F E  TPIL ASSPEGARD+
Sbjct: 121 PEDIRLKYRFVDLRRERVHNNIMLRNKVITSLRRRMIDQGFSEFQTPILGASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQ +KQLLM +GFDRYFQIAPCFRDED R+DR P EFYQLD E
Sbjct: 181 LVPSRLHPGRFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDLRADRSP-EFYQLDFE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN--TVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+D+   +E VL GVFEEFS G   T +  F RI Y +A+ +YG+DKPDLRNPII
Sbjct: 240 MSFVTQEDVFQAIEPVLAGVFEEFSGGKSVTPAGEFPRIPYAEAMLKYGSDKPDLRNPII 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +VT HF  S F +F KI+           P      +R F D MN+WAR +G  GL Y
Sbjct: 300 ITDVTHHFEKSGFGIFEKIVGGGGIVRAIPAP-NTNEKSRKFFDEMNDWARREGYSGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  +  E G     GP+AK+        +   L + + D  FF AG P +    A  AR 
Sbjct: 359 VTRKGGEFG-----GPIAKNHGPEEMAKLYDELGLGENDGLFFAAGKPKEAEKLAGAART 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++L +I   CF+FCWI+DFP +E++E++K+IDF+HNPF+MPQG M++L+  D L IK
Sbjct: 414 RVGEQLELIEQGCFKFCWIVDFPMFEYDEDQKRIDFSHNPFSMPQGEMDALENQDPLEIK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG+E++SG IRNH  ++M +AF   G SKE V+  F G+  AF+ G PPHGG
Sbjct: 474 AWQYDIVCNGYELSSGAIRNHRPDIMYKAFEVAGYSKEDVDANFSGMIEAFKLGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            A GIDRIVMLL    N+REV  FPM+Q   DL+MG+PS VS +QLREL +R VE PK
Sbjct: 534 SAPGIDRIVMLLADEPNIREVIAFPMNQRAQDLMMGAPSIVSPKQLRELSIRTVEQPK 591


>gi|304437074|ref|ZP_07397037.1| aspartate--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304370025|gb|EFM23687.1| aspartate--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 602

 Score =  643 bits (1658), Expect = 0.0,   Method: Composition-based stats.
 Identities = 235/603 (38%), Positives = 352/603 (58%), Gaps = 11/603 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
             RTH CG L    VG  V L GWV R R HGG+IF+D+RD  G  Q+V +  +     F
Sbjct: 7   MKRTHGCGILRKEQVGEEVTLCGWVSRRRDHGGLIFVDMRDRSGFVQIVFDEAAMAEGTF 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+++RSE+VLC+ G V +RSAET+N N+ TG+IE+   ++ IL+ A+  P  +    +
Sbjct: 67  HEAETLRSEFVLCVRGTVRARSAETVNPNMATGEIEIVVSELRILNKAKTPPFYIQDGVD 126

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR +YR+LDLRR  +  N++ R R+   MR       F+E  TP+L  S+PEGARD
Sbjct: 127 VDEMIRLRYRYLDLRRPEMQANMILRHRVTKIMRDFFDRSGFLEIETPMLCKSTPEGARD 186

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR+N G FYALPQ+PQ +KQLLM SGF++YFQI  CFRDED R+DR P EF QLD+
Sbjct: 187 FLVPSRLNPGEFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQP-EFTQLDI 245

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++QD IL  ME +++ +FE+          F R+ +D+A+ R+G+DKPDLR  + +
Sbjct: 246 EMSFMDQDSILTLMEGMVKELFEKSIGAKI-ETPFQRMSWDEAMDRFGSDKPDLRFGMEL 304

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T++   S+F+VF+ ++      +V  +        R   D +  + +     GLA+I
Sbjct: 305 QDITDYVGGSDFKVFNAVMEAGGRVKVINVEGY-ANIPRRELDGLVSYVQGYSAKGLAWI 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +            P  K  +    E I+  +  + GD    +A  PL       + R  
Sbjct: 364 QYT-----EEGVKSPFKKFYSDETFETIKNAVGAKTGDLLLVVADQPLVVAQALGELRLE 418

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +  G+I+ +   F W++DFP +E++ EEK+    H+PFT P+        +D   +KA
Sbjct: 419 MGRRRGLIDPDALRFLWVVDFPMFEYSAEEKRYKAMHHPFTAPRDEDVPFLKSDPGRVKA 478

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G +R + S++  Q F  +G + E    RFG +  AF+ G PPHGG+
Sbjct: 479 NAYDMVLNGVEIGGGSLRIYSSDLQEQVFEALGFTPEEARARFGFMMNAFEYGTPPHGGL 538

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           A G+DR+VML+   +++R+V  FP +Q+  D++  +P+TV  +QLREL +R     KK  
Sbjct: 539 AFGLDRLVMLMAKRRSIRDVIAFPKTQSASDVMSEAPATVDEKQLRELYIRTAVPKKKAD 598

Query: 600 KIS 602
           + +
Sbjct: 599 EAA 601


>gi|256823083|ref|YP_003147046.1| aspartyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796622|gb|ACV27278.1| aspartyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 590

 Score =  643 bits (1658), Expect = 0.0,   Method: Composition-based stats.
 Identities = 230/595 (38%), Positives = 348/595 (58%), Gaps = 9/595 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEI 61
           + R+H CG+L  ++V   V LSGWVHR R  GG+IFL +RD  G+ QVV +PD    F  
Sbjct: 4   KMRSHYCGELSKNEVNQSVTLSGWVHRRRDLGGLIFLQVRDRSGLIQVVIDPDFKELFAT 63

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +R+E+V+ + G V +R  E +N N+ TG+IE+ AQ++ IL+ A+   +P+    E  
Sbjct: 64  AEQLRNEFVIQVKGQVRARPDEMVNKNMTTGEIEVLAQELTILNKAQPPAIPIDENLEAS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR  + +N++ R ++ ++MR  M    FI+  TPILT ++PEGARD+L
Sbjct: 124 EEQRLKYRYLDLRRPEMAQNMIFRHKVTSAMRRYMDEHGFIDVETPILTKATPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF QLD+E 
Sbjct: 184 VPSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQLDIET 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++Q++++  ME ++R +F+E       +  F R+ Y +A+ RYG+DKPDLR  + +  
Sbjct: 243 SFLDQEEVMQLMEGLIRHLFQELMAIELPA--FPRMSYAEAMERYGSDKPDLRTDMELVT 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V E     EF+VF+               + G   +R   D    +    G  GLA++  
Sbjct: 301 VDEIVKDVEFKVFAGPAKDEQSRVAALRVSGGAKLSRKQIDEYTNFVGIYGAKGLAWM-- 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +++  G      P+ K L      AI  ++  Q+GD  FF +             R  +A
Sbjct: 359 KVNGQGAENLQSPILKFLGDDKALAIVEKVGAQEGDIIFFGSDTKRVVADAMGALRLKVA 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L +I  + ++  W++DFP +E  E + +I   H+PFT P+    +    +     +  
Sbjct: 419 ADLELIR-DEWKPLWVVDFPMFE--EIDGEIHALHHPFTAPKDNDAAAVKANPTETLSKA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  ++    F  +GI +   + +FG L  A + G PPHGG+A 
Sbjct: 476 YDMVLNGSEVGGGSIRIHNQDMQETVFDILGIDETEQKEKFGFLLDALKFGCPPHGGLAF 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VML++GA ++R+V  FP +      L  +PS V  +QL ELG+++ +  K
Sbjct: 536 GLDRLVMLMVGADSIRDVIAFPKTTTASCPLTQAPSVVEEKQLDELGIQVKKKEK 590


>gi|39996563|ref|NP_952514.1| aspartyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|62287579|sp|Q74D56|SYD_GEOSL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|39983444|gb|AAR34837.1| aspartyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298505579|gb|ADI84302.1| aspartyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 594

 Score =  643 bits (1658), Expect = 0.0,   Method: Composition-based stats.
 Identities = 235/593 (39%), Positives = 345/593 (58%), Gaps = 10/593 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
            R+H CG L  +DVG  V L GWV R R HGG+IF+D+RD  G+ Q+V +P         
Sbjct: 9   KRSHLCGTLTKADVGKQVTLMGWVMRRRDHGGLIFIDLRDREGLAQIVFDPAKAPEAHRE 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A++VR+E+V+ I G V+ R   T+N N+ TG++E+   + ++L+ ++ LP  +    +  
Sbjct: 69  AEAVRNEYVVAIKGEVVPRPEGTVNPNMKTGEVEILVTQCKLLNRSKALPFTLDDYVDVA 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R K+R+LDLRR  L +N++ R+R+    R  +    F+E  TP LT S+PEGARDFL
Sbjct: 129 ENLRLKHRYLDLRRTPLQQNLILRSRVSQVTRQYLTENGFLEIETPFLTKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+NQG+FYALPQ+PQ +KQ+LM SGFDRYFQ+  CFRDED R+DR P EF Q+D E+
Sbjct: 189 VPSRINQGNFYALPQSPQIFKQILMISGFDRYFQVVRCFRDEDLRADRQP-EFTQIDCEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV++DD++  ME ++  +F+E +    V     R+ Y +AIRRYG D PD+R  + +  
Sbjct: 248 SFVDRDDVIAVMEGLIARIFKE-AKEIDVQLPIPRMTYAEAIRRYGVDNPDVRFGLELVE 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+    S F+VF+ + +     +           +R   D + E+ +  G  GLAY+  
Sbjct: 307 LTDIVKGSGFKVFADVAAGGGIIKGLNAK-GCARFSRKEIDDLTEFVKIYGAKGLAYVKI 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E        P+AK         +      ++GD   F+A  P          RN +A
Sbjct: 366 EGGE-----WHSPIAKFFTAQEIADMNRAFGAEEGDLLLFVADKPKVVNDSLGKLRNQLA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           Q LG+++   F+F WI DFP  EW+EEEK+    H+PFT P         +D  + +A  
Sbjct: 421 QILGLVDKGTFKFVWITDFPLLEWDEEEKRWAAVHHPFTAPMDEDLDKVESDPGACRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H   +    F  +G+S+E    +FG L  A + G PPHGGIA 
Sbjct: 481 YDLVLNGNEIGGGSIRIHQQHIQSLMFRMLGLSEEEARAKFGFLLDALEFGTPPHGGIAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR++MLL G+ ++R+V  FP +Q    L+  +PS V  +QLREL +++   
Sbjct: 541 GMDRLIMLLTGSDSIRDVIAFPKTQKGACLMSDAPSPVDSKQLRELAIKVTVK 593


>gi|332799389|ref|YP_004460888.1| aspartyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332697124|gb|AEE91581.1| aspartyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 590

 Score =  642 bits (1657), Expect = 0.0,   Method: Composition-based stats.
 Identities = 240/596 (40%), Positives = 352/596 (59%), Gaps = 11/596 (1%)

Query: 1   MHRY--RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SA 57
           M +   R + CGDL     G  V LSGWV   R  GG+IF+D+RD  GI QVV NP+   
Sbjct: 1   MKKKIKRNYYCGDLTKEHEGEEVCLSGWVQTRRDLGGLIFVDLRDRSGIVQVVFNPERKE 60

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F+ A  +RSE+V+ + G V  R AE +NA I TG IE+  ++++ILS A+  P P+   
Sbjct: 61  AFKKADEIRSEYVIAVKGKVCRRPAENVNAKISTGYIEVIGEELDILSKAKTPPFPIEDN 120

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +  E +R KYR+LDLRR ++  N++ R++I  ++R  +    F+E  TP+LT S+PEGA
Sbjct: 121 IKVDEIVRLKYRYLDLRRPSMQYNMIFRSKINKAIRDFLDENGFVEVETPVLTKSTPEGA 180

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSR+N G FYALPQ+PQ +KQ+LM +G DRY+QIA CFRDED R+DR P EF QL
Sbjct: 181 RDYLVPSRLNPGKFYALPQSPQLFKQILMVAGMDRYYQIARCFRDEDLRADRQP-EFTQL 239

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV+ DDI++  E +++ V E+ +    V   F R+ Y+ A+ +YG+DKPD R  +
Sbjct: 240 DIEMSFVDVDDIISLNEKLIKYVVEKVTGIK-VEIPFARMTYEQAMEKYGSDKPDTRFGM 298

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            M +++     S F+VFS ++      +   I   G   +R   D + E A+  G  GLA
Sbjct: 299 EMVDISNIVGSSSFKVFSDVVKDGGRVKGINIKNGGKAFSRRQIDELVEKAKEFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADA 416
           ++        +     P+ K  +    + I+ + D + GD   FIA    +   +     
Sbjct: 359 WMNVT-----SEGIKSPITKFFDEQTIKEIKDKFDCEVGDLIVFIADSNAELVMTSLGSL 413

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R ++A+ L +I+ N   F WI +FP  E+NEEEK+    H+PFT P      L   +   
Sbjct: 414 RIYLAKALNLIDKNKLNFLWITEFPLLEYNEEEKRFVAKHHPFTSPMEEDIPLLDKEPSR 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD+V NG E+  G IR H + +  + F  +G SKE   N FG L +AF+ G PPH
Sbjct: 474 VRAKAYDIVLNGTELGGGSIRIHDAALQEKMFETLGFSKERAWNNFGFLLKAFEYGTPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GGIA G+DR++MLLLG  ++R+   FP +QN    +  +PS V  +QL+EL +++ 
Sbjct: 534 GGIAYGLDRMIMLLLGLDSIRDCIAFPKTQNASCPMTDAPSEVDAKQLKELHIQVK 589


>gi|120601079|ref|YP_965479.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|120561308|gb|ABM27052.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 610

 Score =  642 bits (1657), Expect = 0.0,   Method: Composition-based stats.
 Identities = 242/595 (40%), Positives = 354/595 (59%), Gaps = 14/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTHSC +L  +DVG+ V + GWV   R HGG+IF+D+RD  G+TQVV +PD      + A
Sbjct: 24  RTHSCCELTAADVGNDVCIMGWVQYRRDHGGLIFVDLRDRKGLTQVVFSPDFAPEAHKDA 83

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VRSE+VL I G V  R     N  + TG+IE+   + ++L+ ++  P  +    E  E
Sbjct: 84  HIVRSEYVLAIRGRVRPRPEGMTNPGMKTGEIEVVVSEWKLLNTSKTPPFLIEDRTEASE 143

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R  +R+LDLRR  + +N + R R   S R  +   +F+E  TP LT ++PEGARDFLV
Sbjct: 144 NLRLAWRYLDLRRPRMARNFMLRHRAAQSARRYLDELDFLEIETPYLTKATPEGARDFLV 203

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR   EF Q+D+EMS
Sbjct: 204 PSRLNHGMFYALPQSPQIFKQLLMVSGMDRYYQIVRCFRDEDMRADRQL-EFTQIDIEMS 262

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ +++  E ++  V ++    + V+  F R+ YD A+  YG DKPD R  + + +V
Sbjct: 263 FVDEERVMSMAEGLMTRVMKDTLGVD-VTLPFPRMTYDQAMGEYGVDKPDTRFDLRLKDV 321

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+    SEF++F+K   V            G    R   D   E+ +  G  GLA+I  R
Sbjct: 322 TDAVRGSEFKLFAKAPLVK-----AMRVPGGETMTRKEIDEFTEFVKIYGAQGLAWIKIR 376

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E        P+AK L+     A+   L ++ GD  FF AG+P    +   + R  + Q
Sbjct: 377 EGE-----WQSPIAKFLSETERAALVAALGLEVGDIVFFQAGEPGMVNAALGNLRVKLGQ 431

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            LG+I  + + F W+ DFP +E++EEEK+    H+PFT P+ G   L  +D  + +A  Y
Sbjct: 432 HLGLIPEDTYNFLWVTDFPLFEYDEEEKRYVACHHPFTSPKDGHFDLMTSDPAAARARAY 491

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H +EV  + F+ +G+  +  E +FG L +A + G PPHGGIA G
Sbjct: 492 DMVLNGYELGGGSIRIHSAEVQRRMFAALGLDPQEAEEKFGFLIQALEHGAPPHGGIAFG 551

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G+ ++R+V  FP +Q    L+  +P  VS  QLR+LG+R+ E P++
Sbjct: 552 MDRLVMLLTGSPSIRDVIAFPKTQKATCLMTQAPDAVSARQLRDLGIRLRETPQE 606


>gi|97196714|sp|Q2W3D5|SYD_MAGMM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|82946776|dbj|BAE51640.1| Aspartyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 876

 Score =  642 bits (1657), Expect = 0.0,   Method: Composition-based stats.
 Identities = 314/603 (52%), Positives = 414/603 (68%), Gaps = 10/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CG L  +D G   RLSGWVHR R HG ++F+D+RDHYGITQ V +  S  F 
Sbjct: 279 MHVYRSHTCGQLKAADAGIQARLSGWVHRKRDHGNLLFVDLRDHYGITQCVIDVSSPVFA 338

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                R E V+ + G V+ RSAETIN  + TG+IEL   ++EI S+A+ LP+ V G++EY
Sbjct: 339 ALDKARPESVITVTGKVVKRSAETINPRLPTGEIELQVAEVEIQSIADVLPIQVAGDQEY 398

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ +H N++ R+R+I  +R  MI + F E  TPILTASSPEGARD+
Sbjct: 399 PEDMRLRYRFLDLRREDVHANMMLRSRVIAYLRQAMIGQGFTEFQTPILTASSPEGARDY 458

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFD+YFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 459 LVPSRIHPGKFYALPQAPQQFKQLLMVAGFDKYFQIAPCFRDEAGRADRSPGEFYQLDFE 518

Query: 241 MSFVEQDDILNTMENVLRGVFEEF-SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MS+V QDD+   +E VL GVF+EF          F RI Y D++ +YG+DKPDLRNPII+
Sbjct: 519 MSYVTQDDVFAAIEPVLEGVFKEFGKGRAVTPAPFPRITYADSMLKYGSDKPDLRNPIII 578

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F+K+  V+ G  V AIPA G  G  R++ D++N+WAR  G  GL Y
Sbjct: 579 ADVTEPFRGSGFGLFAKL--VDKGAVVRAIPAPGAAGQPRSWFDKLNDWARENGAGGLGY 636

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D        GP+AK+L     EAI+   +++DGD+ FF     L    FA   R 
Sbjct: 637 IQFAAD-----GPKGPIAKNLEPARVEAIKAAANLKDGDAVFFACDKALPAAKFAGLVRT 691

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I  EL ++  + F+FCW +DFP YE NEE   ++F+HNPF+MPQGGM++L   D L+I 
Sbjct: 692 KIGNELDLLEKDVFKFCWTVDFPMYEINEETGLVEFSHNPFSMPQGGMDALLNQDPLTIN 751

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH  ++M +AF   G S   VE  FGG+  AF+ G PPHGG
Sbjct: 752 AYQYDIVCNGVELSSGAIRNHRPDIMYKAFEIAGYSAAHVEEHFGGMLNAFKFGAPPHGG 811

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597
            A G+DRIVMLL    N+RE+ LFPM+Q   DLLM +P+ +++E+LREL +++ +  PKK
Sbjct: 812 SAPGVDRIVMLLADQPNIREIILFPMNQQAQDLLMQAPAEIAMERLRELHIKVDLPKPKK 871

Query: 598 ILK 600
            +K
Sbjct: 872 EVK 874


>gi|229006737|ref|ZP_04164371.1| Aspartyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228754598|gb|EEM04009.1| Aspartyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 591

 Score =  642 bits (1657), Expect = 0.0,   Method: Composition-based stats.
 Identities = 232/595 (38%), Positives = 346/595 (58%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPEISKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGQGAINENMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  ++     R  +  ++R  + +E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMYNTFKMRHDVTKTIRNFLDSEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQ+PQ +KQLLM  GF+ Y+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHEGEFYALPQSPQLFKQLLMVGGFECYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL  ME ++  V ++       +  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILEMMERMMTKVMKDAKGVEVRA-PFPRMKYADAMARYGSDKPDTRFAMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +  +   +        G  +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAADCGFKVFTSAVESSGQVKAINAKGAAGKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   LD   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMSTLDGAAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTDAPSPVAEAQLEELYLQLNVKEEK 591


>gi|89100800|ref|ZP_01173653.1| aspartyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084503|gb|EAR63651.1| aspartyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 591

 Score =  642 bits (1657), Expect = 0.0,   Method: Composition-based stats.
 Identities = 230/589 (39%), Positives = 350/589 (59%), Gaps = 9/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-- 62
           RT+ CG++    +G  V L GWV + R  GG+IF+D+RD  G+ QVV NP+++   +A  
Sbjct: 4   RTYFCGEVTEKSIGEKVTLKGWVQKRRDLGGLIFIDLRDRTGLVQVVFNPETSPEALAAA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +R+E+VL ++G V++R   TIN N+ TG+IE+SA+ + I++ A+  P  +  + +  E
Sbjct: 64  EKIRNEYVLSVEGKVVAREPGTINENLPTGKIEVSAEAVTIINEAKTPPFVIADQTDVSE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LD RR  + +    R ++  S+R  + +E F++  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDFRRPVMFETFKMRHQVTKSIRDYLDSEGFLDIETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  G +RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHPGEFYALPQSPQIFKQLLMVGGIERYYQIARCFRDEDLRADRQP-EFTQIDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q+DI++  E ++  V +E    +  +    R+ Y +A+ RYG+DKPD R  + + N+
Sbjct: 243 FMSQEDIISMTEQMMTKVMKEVKGIDI-TLPIQRMTYQEAMDRYGSDKPDTRFAMELVNL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E   +S F+VF+  +S     +   +       +R   D + E+A   G  GLA++   
Sbjct: 302 SETLSNSGFKVFAGAISSGGEVKAINVKDAASKYSRKDIDALTEFASRYGAKGLAWLK-- 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +      GP+AK +      AI+  L ++ GD   F+A             R  + +
Sbjct: 360 ---AEEEGLKGPIAKFVAEEEQAAIKELLGVETGDLLLFVADKKSVVADALGALRLKLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+ + F F W+ ++P  E++EEE +   AH+PFTMP          D   +KA  Y
Sbjct: 417 ELGLIDQSLFNFLWVTEWPLLEFDEEEGRYYAAHHPFTMPNREDLEYLDTDPSKVKAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R    E+  + FS +G SKE    +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIFEREIQEKMFSVLGFSKEEAREQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR+VMLL G+ N+R+   FP + +   LL  +P  VS  QL +L L++
Sbjct: 537 LDRLVMLLAGSSNLRDTIAFPKTASASCLLTNAPGEVSEAQLNDLHLQL 585


>gi|254459898|ref|ZP_05073314.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206676487|gb|EDZ40974.1| aspartyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 591

 Score =  642 bits (1657), Expect = 0.0,   Method: Composition-based stats.
 Identities = 339/594 (57%), Positives = 429/594 (72%), Gaps = 4/594 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL  S+VG  VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+PDS  F 
Sbjct: 1   MHAYRSHTCADLNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGITQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG VM+R    +N  I TG++E+  + IE+L  A ELPL VFGE+EY
Sbjct: 61  EIEKVRSEWCIRIDGNVMARDESLVNPKIPTGEVEVFIRDIEVLGSASELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYR+LDLRR+ L +N+  R+ ++ SMR RM  +NF E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLKYRYLDLRREKLQRNMTLRSDVVASMRKRMWDQNFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR + G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRQHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+ NT++ V+ G+FEEF  G  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQEDVFNTIQPVVGGIFEEFGGGRKVDQTWEQISYKDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L  +   E+ AIPA  GG +R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSEHFAGSGFAIFAKLLEQDGT-EIRAIPAPTGG-SRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F S A  ARN I
Sbjct: 359 WRDQGEG-MEAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGKPSAFESVAGRARNEI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            Q L +I+ + F F WI+DFP YE +EE  KIDF+HNPF+MPQGG+E+L G D L +  +
Sbjct: 418 GQALKLIDEDRFAFAWIVDFPMYEADEETGKIDFSHNPFSMPQGGLEALNG-DPLDVLGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  ++M +AF   G  K+ VE RFGG+  AFQ G PPHGG A
Sbjct: 477 QYDLACNGYELISGAIRNHQPDIMFKAFELAGYGKDEVEKRFGGMVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           AGIDRIVMLL    N+REV +FPM+Q   DL+M +PS    +Q+ ELGLR++  
Sbjct: 537 AGIDRIVMLLADEANIREVIMFPMNQRAEDLMMNAPSEPMSDQMMELGLRVIPQ 590


>gi|188585918|ref|YP_001917463.1| aspartyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|229470562|sp|B2A2G0|SYD_NATTJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|179350605|gb|ACB84875.1| aspartyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 585

 Score =  642 bits (1657), Expect = 0.0,   Method: Composition-based stats.
 Identities = 241/593 (40%), Positives = 358/593 (60%), Gaps = 10/593 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
             RTH CG+L    VG  V L GW    R HG +IF+D+RD+ G+ QVV + +S     E
Sbjct: 1   MKRTHYCGELTRELVGKKVVLKGWADNRRDHGKLIFIDMRDNSGLVQVVCDFESNPEALE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A SVRSE+VL I G V  RS E +N ++ TG+IE+  + I +L+ ++  P  +    + 
Sbjct: 61  VADSVRSEYVLEITGTVRERSPENVNPDLKTGEIEVDCEDINVLNTSKTPPFFINENVDV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR ++  NI  R +I   +R  +    FIE  TP+LT S+PEGARDF
Sbjct: 121 DENIRLKYRYLDLRRPSMQNNIYLRHKITKLVRDFLDENGFIEVETPMLTKSTPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+++GSFYALPQ+PQ +KQLLMASG ++YFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRLHEGSFYALPQSPQLFKQLLMASGVEKYFQIARCFRDEDLRADRQP-EFSQIDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF EQ++ +  MEN++  +F+E      ++  F RI Y +A+ RYG+D PDLR  + +H
Sbjct: 240 MSFFEQEEFMKLMENMVSKLFKEVLGIE-LTKPFPRITYQEAMDRYGSDSPDLRYGLELH 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++    +EF+VF + ++     +  A+P +G   +R   D + E+ +  G  GLA++ 
Sbjct: 299 DVSDLVKDAEFKVFRETVASEGQVKGIAVP-QGQEFSRKEIDDLTEFVKEFGAKGLAWMV 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              +E        P+AK  +    + I  R+    GD   F+A +P       +  R H+
Sbjct: 358 LEEEE-----IKSPIAKFFSDEELDGIIDRMGANTGDLLLFVADEPEIVADSLSKLREHL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A +L +I  N ++  W++DFP  E++++E +    H+PFT P         N+   I+A 
Sbjct: 413 ANKLDLIPSNEYQLTWVIDFPLMEYDKDEGRYKALHHPFTSPYEDDLEKYENEPEKIRAK 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG EI  G +R H  E+  + F  +GI  E  + +FG L+ AF+ G PPHGGIA
Sbjct: 473 AYDLVLNGVEIGGGSMRIHQKELQEKMFEFLGIPLEEAKQKFGFLFEAFEYGTPPHGGIA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR+VML  G++++R+V  FP + N   L+  +P+ V   QL+EL L+  +
Sbjct: 533 FGLDRLVMLFTGSQSIRDVIAFPKTANASCLMTEAPAKVDENQLKELHLKTTK 585


>gi|326795232|ref|YP_004313052.1| aspartyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326545996|gb|ADZ91216.1| aspartyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 589

 Score =  642 bits (1657), Expect = 0.0,   Method: Composition-based stats.
 Identities = 227/591 (38%), Positives = 342/591 (57%), Gaps = 7/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG+L   ++   + L GWVHR R HGG+IFLDIRD  GITQVV +PD    F +A 
Sbjct: 2   RSHYCGELTAKNISEEITLCGWVHRRRDHGGVIFLDIRDRDGITQVVFDPDRAESFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+V+ + GLV  R   T+N N+ TG+IE+  +++EIL+ +E  P  +   +   E 
Sbjct: 62  SVRNEYVVKVSGLVRPRPEGTVNPNMTTGEIEVLGKELEILNRSETPPFQLDEHQNVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR K RF+DLRR  + + +  R+++ + +R  +    F++  TPILT ++PEGARD++VP
Sbjct: 122 IRLKSRFVDLRRPEMQEKLRFRSKVTSVLRRHLDENGFLDIETPILTRATPEGARDYVVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR +QGSF+ALPQ+PQ +KQ+LM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHQGSFFALPQSPQLFKQMLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++ I+   E+++  +F+E  + +     F R+ Y +A+  YG+DKPDLR P+ +  V+
Sbjct: 241 MGEEAIMEMTESMIVSLFKELKDVDLGE--FPRMPYAEAMETYGSDKPDLRIPLTIQTVS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS       G         G    R   D   ++    G  GLAYI    
Sbjct: 299 DLMEGVDFKVFSGPAVDPKGRVAALKVPGGNSLTRKQIDAYTKFVGIYGAKGLAYIKVNN 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
                     P+ K L +   +A+  R D  DGD  FF A             R  + ++
Sbjct: 359 KADLEEGLQSPIVKFLPVEVRKALLERTDANDGDLIFFGADKATVVNEALGALRCKLGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +  C  +   W++DFP +E   +   +   H+PFT P    E LK N  ++  +  YD
Sbjct: 419 LNLYTCE-WAPLWVVDFPMFEELPD-GGVTAIHHPFTAPSCSPEELKAN-PVAALSQAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  E+    F  + I++E  + +FG L  A + G PPHGG+A G+
Sbjct: 476 MVLNGTELGGGSVRIHQPEMQQTVFELLNINEEEQQEKFGFLLDALKYGAPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR+VML+  + ++R+V  FP +Q+   LL  +P  VS +QL+EL +R+ + 
Sbjct: 536 DRLVMLMTDSASIRDVIAFPKTQSATCLLTQAPGDVSDKQLKELSIRVRKP 586


>gi|121999005|ref|YP_001003792.1| aspartyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|121590410|gb|ABM62990.1| aspartyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 617

 Score =  642 bits (1656), Expect = 0.0,   Method: Composition-based stats.
 Identities = 226/590 (38%), Positives = 337/590 (57%), Gaps = 5/590 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG++  S + + V L GWVHR R HGGIIF+D+RD  G+ QVV +PD    F  A 
Sbjct: 25  RSHYCGEICESHLDTEVTLCGWVHRRRDHGGIIFIDLRDRAGLVQVVVDPDTEEAFAAAD 84

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             R+E+VL I G V  R   T N ++ +G++E+  + +E+L+ A+  P  +    +  E 
Sbjct: 85  RARNEYVLRITGRVRHRPEGTENPDLHSGRVEVLGRAVEVLNTAKTPPFQLDEHEQVGED 144

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R ++R++DLRR  + + +  R R+ +++R  +  E F++  TP+LT ++PEGARD+LVP
Sbjct: 145 VRLRHRYVDLRRPEMQQRLQLRARVSSAIRRHLEDEGFLDIETPMLTRATPEGARDYLVP 204

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF QLDME +F
Sbjct: 205 SRTHPGRFFALPQSPQLFKQLLMMAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDMEAAF 263

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+++ ++   E +LR +F +      +S+ F R+ Y +A+ RYG+DKPDLR P+ +  V 
Sbjct: 264 VDEEAVMGVTERMLRQLFRQVLGVE-LSDPFPRMRYAEAMDRYGSDKPDLRIPLELVEVG 322

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS       G         GGG  R   D   ++    G  GLAYI    
Sbjct: 323 DLVREVDFKVFSAPAQDPRGRVAALRVPGGGGLTRKQIDDYTDFVGRYGAKGLAYIKVND 382

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K L       I  R   Q GD  FF A             R  I  +
Sbjct: 383 PAQGVEGLQSPIVKFLTEEAVRGILERTGAQAGDVVFFGADRASVVNDALGALRVRIGHD 442

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLKGNDLLSIKAFQY 482
           +G++  + +   W++DFP +E++E++ ++   H+PFT         L+  D  ++ +  Y
Sbjct: 443 MGLV-EDAWRPLWVVDFPMFEYDEKDGRLYSLHHPFTAPCVQDPAELQQQDAEALVSRAY 501

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D V NG E+  G IR H  ++    F  +GI +E   ++FG L  A Q G PPHGGIA G
Sbjct: 502 DCVLNGVELGGGSIRIHDPDMQQAVFGVLGIGEEEARSKFGFLLDALQYGCPPHGGIAFG 561

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR+VML+ GA ++REV  FP +Q    +L  +P+ V   QLRELG+R+ 
Sbjct: 562 MDRLVMLMAGADSIREVMAFPKTQTATCMLTEAPAEVGEAQLRELGIRLR 611


>gi|319651675|ref|ZP_08005802.1| aspartyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396742|gb|EFV77453.1| aspartyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 591

 Score =  642 bits (1656), Expect = 0.0,   Method: Composition-based stats.
 Identities = 234/589 (39%), Positives = 351/589 (59%), Gaps = 9/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-- 62
           RT+ CG++    +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+ +   +A  
Sbjct: 4   RTYFCGEVTEKAIGEKVSLKGWVQKRRDLGGLIFVDLRDRTGIVQVVFNPEVSPEALAAA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +R+E+VL I+G V++R   TIN N+ TG+IE+ A+K+ I++ A+  P  +  + +  E
Sbjct: 64  EKIRNEFVLDIEGEVIAREEGTINENLKTGRIEIKAEKVTIINEAKTPPFVIDDKADVSE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R ++  +MR  + +E F++  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPIMFDTFKMRHQVTKAMRDYLDSEGFLDVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+QIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 184 PSRVHPGEFYALPQSPQIFKQLLMVGGFERYYQIARCFRDEDLRADRQP-EFTQVDIEMS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++I+  MEN+++ + +E    + V   F R+ Y +A+ R+G+DKPD R  + + ++
Sbjct: 243 FMSQEEIIGLMENMMKKIMKEVKGLD-VQLPFPRMTYQEAMDRFGSDKPDTRFGMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E    S F+VF+  ++     +   +    G  +R   D + E+A   G  GLA++   
Sbjct: 302 SEIVKESSFKVFAGAVASGGQVKAINVKKGAGKYSRKDIDALTEFAAVYGAKGLAWLKAE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK +     +A    L ++ GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFVTEDEQKAFYAALSVEPGDLLLFVADKKNVVADALGALRLKLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++EEE +   AH+PFTMP      L   D   ++A  Y
Sbjct: 417 ELDLIDQSKFNFLWVTDWPLLEYDEEEGRYYAAHHPFTMPAREDLDLLDKDPAQVRAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R    +V  + FS +G SKE    +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIFERDVQEKMFSVLGFSKEEAVEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR+VMLL G  N+R+   FP + +   +L  +P  VS  QL +L L +
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCVLTEAPGEVSQSQLNDLHLAL 585


>gi|82701736|ref|YP_411302.1| aspartyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|97196742|sp|Q2YBG1|SYD_NITMU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|82409801|gb|ABB73910.1| aspartyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 588

 Score =  642 bits (1656), Expect = 0.0,   Method: Composition-based stats.
 Identities = 231/589 (39%), Positives = 338/589 (57%), Gaps = 5/589 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG + V  +   V L GWVHR R HGG+IF+D+RD  G+ QVV +PD+   F++A+
Sbjct: 2   RTNYCGLIDVQYLDQTVILYGWVHRRRDHGGVIFVDLRDREGLVQVVCDPDNPTAFQVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+V+ I G V  R   T+N N+I+G+IE+    I+IL+ +   P  +  E    E+
Sbjct: 62  KIRNEFVVRITGRVRHRPPGTVNPNLISGEIEVLVSSIDILNASLTPPFLMDDESLS-EA 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R ++R+LDLRR  + +N+  R ++  ++R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLEHRYLDLRRPQMQENLRLRYKVAMAVRLFLDQHGFIDVETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVNTGHFFALPQSPQLFKQLLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +  I+  ME ++  VF+   N + +   F R+ + +A+ +YG+DKPD+R  +++  +T
Sbjct: 240 LNESQIMQMMERMICTVFKSVRNID-LPTPFPRLTHGEAMSKYGSDKPDMRVSLVLTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF +      G         GG  +R   D    +    G  GLAYI    
Sbjct: 299 DVMQEVEFKVFREAALRTGGRVAALRVPGGGALSRKEIDDYTGFVAIYGAKGLAYIKVNA 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G      P+ K L     + +  R   +DGD  FF A             R  +  +
Sbjct: 359 LEKGMDGLQSPILKFLPENVIQIVLERTGAKDGDLIFFGADKAQVVNEALGALRAKVGHD 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G+   + ++  W++DFP +E +EEE +    H+PFT P  G E L   D     +  YD
Sbjct: 419 RGLA-ESGWKPLWVVDFPMFERDEEENRWKALHHPFTSPAEGHEDLLETDPEKALSKAYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G +R H  EV  + F  + I  +    +FG L  A Q G PPHGGIA G+
Sbjct: 478 MVLNGSEIGGGSVRIHRQEVQSKVFRALNIGADEANEKFGFLLEALQYGAPPHGGIAFGL 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           DRIV ++ GA+++REV  FP +Q    LL  +PSTV  +QLREL +++ 
Sbjct: 538 DRIVAMMAGAESIREVIAFPKTQRAQCLLTHAPSTVGEKQLRELHIKLR 586


>gi|293395804|ref|ZP_06640086.1| aspartate-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291421741|gb|EFE94988.1| aspartate-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 594

 Score =  642 bits (1655), Expect = 0.0,   Method: Composition-based stats.
 Identities = 226/592 (38%), Positives = 333/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    F+ A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQKTAFDKAF 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  +EI++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQIVGTVRARPDSQINKDMATGEVEVFAHGLEIINRSEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMADRLKARAKITSFVRRFMDQHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEQLVRELWQEVKGVD--LGDFPIMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDAKGRVAAIRVPGGAQLTRKQIDEYGAFVNIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    EA+  R + Q GD  FF A             R  + ++
Sbjct: 357 RAAGLEGVQSPIAKFLNAEVLEAVLARSEAQTGDILFFGADSHKIVTDAMGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   + +   W++DFP +E ++ E  +   H+PFT P+        ND  S  A  YD
Sbjct: 417 LQLTRLDAWAPLWVVDFPMFE-DDGEGGLAAMHHPFTAPRDMAPEALANDPTSAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H SE+    F  +GI++     +FG L  A + G PPH G+A G+
Sbjct: 476 MVVNGYEVGGGSVRIHRSEMQQTVFGILGINEHEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V+  
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPAALQELAISVVKKA 587


>gi|302879663|ref|YP_003848227.1| aspartyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582452|gb|ADL56463.1| aspartyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 598

 Score =  642 bits (1655), Expect = 0.0,   Method: Composition-based stats.
 Identities = 232/593 (39%), Positives = 344/593 (58%), Gaps = 5/593 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG L    +   V + GW HR R HGG+IF+D+RD  G+ QVV NPD    F++A+
Sbjct: 2   RTHYCGTLNTDQLDQTVSICGWAHRRRDHGGVIFIDLRDREGLAQVVCNPDQLEMFKVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+VL I G V  R     N+N+++G+IE+  Q+IE+L+ +   P  +  E    E+
Sbjct: 62  SVRNEYVLRITGTVRRRPEGASNSNLVSGEIEILCQEIEVLNASITPPFQLDDENLS-EN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R  +R +DLRR  + KN++ R ++  + R  + +  FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTHRVIDLRRPQMQKNLMLRYKVTRAFRNFLDSRGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +  I    E ++R VF+E    + + N F R+ Y +A+ R+G+DKPDLR  + +  VT
Sbjct: 240 LNETQITALTEELIRTVFKEALAVD-LPNPFPRMPYSEAMARFGSDKPDLRVTLELTEVT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR- 362
           +      F+VF+ + +   G         G    R   D   ++    G  GLAYI    
Sbjct: 299 DVMKDVAFKVFAGVANSANGRIAAMRVPGGAAFTRGEIDEYTKFVSIYGAKGLAYIKVND 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + +        P+ K+++    +++  R   Q+GD  FF A             R  I  
Sbjct: 359 ITQPNETGLQSPIVKNIHEAALKSVIERTGAQNGDLIFFGADKEKIVNDALGALRCKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E G +N N +E  W++DFP +E++EE K+ +  H+PFT P+    +L  +D     A  Y
Sbjct: 419 EKGHVNGNAWEPLWVVDFPMFEYDEEGKRWNACHHPFTAPKDEHLALLESDPGKCLAKAY 478

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL  NG E+  G +R H +EV  Q F  + I  E  + +FG L  A Q G PPHGG+A G
Sbjct: 479 DLALNGSELGGGSVRIHKAEVQSQVFRALNIGDEEAQLKFGFLLDALQYGAPPHGGLAFG 538

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           +DRIV ++ G++++R+V  FP +Q    LL  +PS V   QLR+L +R+ + P
Sbjct: 539 LDRIVTMMTGSESIRDVIAFPKTQRAQCLLTQAPSAVDERQLRDLHIRLRQQP 591


>gi|190566955|ref|ZP_03019871.1| aspartyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|190561946|gb|EDV15915.1| aspartyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
          Length = 592

 Score =  642 bits (1655), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 344/596 (57%), Gaps = 10/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVSVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDASVLMNTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLL-GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL  G  N+R+   FP + +   LL  +PS V+  QL EL L++    +K
Sbjct: 537 LDRLVMLLAGGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLEELNLKLNVKEEK 592


>gi|77918645|ref|YP_356460.1| aspartyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|97196766|sp|Q3A5R7|SYD_PELCD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|77544728|gb|ABA88290.1| aspartyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 596

 Score =  642 bits (1655), Expect = 0.0,   Method: Composition-based stats.
 Identities = 230/589 (39%), Positives = 336/589 (57%), Gaps = 9/589 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
            R+H CG +  +D G  V L GWV R R HGG+IF+D+RD  GI Q+  +PD      AK
Sbjct: 9   KRSHFCGSITAADTGKEVCLMGWVQRRRDHGGLIFIDLRDRQGIAQLALDPDRDPEAHAK 68

Query: 64  S--VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +  VR+E+V+ + G+V +R   T+N  + TG++E+  +++ +L+ AE  P  +    +  
Sbjct: 69  AERVRNEYVVAVRGIVSARPEGTVNPKMATGEVEVEVKELRMLNGAETPPFLIEDNVDVA 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR K+R+LDLRR  L  N+V R ++   +R  +    FIE  TP+LT S+PEGARD+L
Sbjct: 129 ENIRLKHRYLDLRRPALQSNLVLRHKVAQIVRNYLNDTGFIEVETPVLTKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D E+
Sbjct: 189 VPSRVNPGMFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDCEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV++ DI++ ME ++  VF++      +S    RI Y +++ R+G D PD+R  + +  
Sbjct: 248 SFVDRQDIMDIMEAMIATVFQQILGIE-LSLPMPRITYTESMARFGVDNPDMRFDLELVE 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++       F+VF+  +      ++     +    +R   D + ++ +  G  GLAY+  
Sbjct: 307 ISNIAKDCGFKVFADAVKKGGIVKLLNAK-QCASFSRKEIDDLTDFVKIYGAKGLAYVKI 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D     +   P+AK         I      + GD   F A             R H+ 
Sbjct: 366 QEDG----SWQSPIAKFFTEKEIALIDEAAGSEPGDLLLFAADTFKVANESLGRLRGHLG 421

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           Q+LG+   + F F W+ DFP  EW+ E ++    H+PFT P     +L   D  S +A  
Sbjct: 422 QKLGLARKDDFRFAWVTDFPLLEWDGEARRHVAVHHPFTAPLDEDIALLDGDPGSARAKA 481

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  E+  + FS +GI+ E  E +FG L  A   G PPHGGIA 
Sbjct: 482 YDLVLNGSEIGGGSIRIHNREIQNKMFSLMGITAEEAEEKFGFLLGALSYGAPPHGGIAF 541

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR++M+L G+ ++R+V  FP +Q    LL  +P  V  +QLREL +R
Sbjct: 542 GLDRLMMILTGSDSIRDVIAFPKTQKATCLLSEAPGAVDDKQLRELSIR 590


>gi|127513007|ref|YP_001094204.1| aspartyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166225428|sp|A3QEP7|SYD_SHELP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|126638302|gb|ABO23945.1| aspartyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 592

 Score =  641 bits (1654), Expect = 0.0,   Method: Composition-based stats.
 Identities = 218/594 (36%), Positives = 341/594 (57%), Gaps = 6/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F++A 
Sbjct: 2   RSHYCGDVNRSHVGEEVTLVGWVNRSRDLGGVVFLDLRDREGVIQVVYDPDLPEVFDVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+ + + GLV +R    IN  + TG+IE+  + + IL+ A  LP+ +   +   E 
Sbjct: 62  TLRSEFCVQVKGLVRARPDSQINDQMRTGEIEVLGKALTILNSAPALPINMDKNQHNTEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + I+ R+++ +++R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAERIIFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +++  E ++RG+F+E  N +     F ++ + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 241 MTSAQVMDKTEEMVRGLFKELLNVDLGE--FPKMTFAEAMRRYGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF +  + + G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DLVKDVDFKVFQEPANDSEGRVAVLCVPGGASLSRKQLDEYGKYVNIYGAKGLAWMKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E+G      PV K L+    + I  R    +GD   F A             R  + ++
Sbjct: 359 LENGLEGIQSPVLKFLSEEVVKGILERTGAANGDLILFGADKANIVAEAMGALRLKVGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++  + ++  W++DFP +E   +   +   H+PFT P G   +    D  +  +  YD
Sbjct: 419 FDLLQGD-WKPLWVVDFPMFERTSD-GGLHAMHHPFTAPSGITPAELEADPTAAISDAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R + +E+    F  +GI+ E  + +FG L  A + G PPH G+A G+
Sbjct: 477 MVLNGCELGGGSVRIYDAEMQSAVFRILGINDEEAQEKFGFLLEALKYGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+VML+ GA ++R+V  FP +      L  +P   +  QL ELG+ +VE  K+
Sbjct: 537 DRMVMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLEELGVSVVEAKKE 590


>gi|330959262|gb|EGH59522.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 590

 Score =  641 bits (1654), Expect = 0.0,   Method: Composition-based stats.
 Identities = 238/593 (40%), Positives = 344/593 (58%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 2   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 62  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +       F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 241 LNEEDIIGLTEKMVRQLFKEVLDLEFDE--FPHMTFEEAMRRYGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G              R+  D   ++    G  GLAYI    
Sbjct: 299 DQLTGVEFKVFSGPANDPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +   N   I  R+   DGD  FF A             R  I  +
Sbjct: 359 RAKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGADKFKIVSEALGALRIKIGND 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +  C  +   W++DFP +E NE+       H+PFT P+   E L+ N   +  +  YD
Sbjct: 419 LKLHTCE-WAPMWVVDFPMFEENED-GSFTALHHPFTAPKCTPEELEAN-PATALSRAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A G+
Sbjct: 476 MVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 536 DRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 588


>gi|330993298|ref|ZP_08317234.1| Aspartyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759700|gb|EGG76208.1| Aspartyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 598

 Score =  641 bits (1654), Expect = 0.0,   Method: Composition-based stats.
 Identities = 315/599 (52%), Positives = 403/599 (67%), Gaps = 10/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTHSC  L  +D G   RLSGWVH  R HGG++F+D+RDH+G+TQ+V    S   E
Sbjct: 1   MHPYRTHSCAALRAADAGQTARLSGWVHSKRDHGGLLFIDLRDHFGMTQIVIPAGSPVLE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ VR E VL + G V+ R   T N N+ TG+IEL A++I + S A+ LPL V G   Y
Sbjct: 61  TAERVRVESVLTVTGEVVLRDGATKNPNLPTGEIELRAREITVQSSADVLPLQVAGNEHY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R  YR++DLRR+ +H+NI+ R ++I S+R RM    F+E  TPILTASSPEGARDF
Sbjct: 121 PEDLRLTYRYIDLRREKVHRNIMLRAQVIASLRRRMTDLGFVEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPARMHPGRFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEAARADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT-VSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           M+F  Q+D+  T+E V+ GVF EF  G       F RI Y  A+  YG+DKPDLRNP+ +
Sbjct: 241 MAFATQEDVFATLEPVMEGVFREFGGGRIVSEGPFERIPYATAMAVYGSDKPDLRNPLRL 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F++I +        AIPA G G   RAF D++N WAR  G  GL Y
Sbjct: 301 SDVTEAFADSGFGLFARIAADGGQIR--AIPAPGAGDRPRAFFDKLNNWARESGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D      G GP+AK+L     EAIR +  ++ GD+ FF+AG   +   F+   R 
Sbjct: 359 IIFAED-----GGKGPIAKNLEADRIEAIRAKTGLKAGDAVFFVAGKGDEMVRFSGAVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A EL +I  N F FCWI DFP YE NEE  +IDF+HNPF+MPQGGM++L   D L+IK
Sbjct: 414 RVATELDLIEQNAFRFCWITDFPMYERNEETGQIDFSHNPFSMPQGGMDALLNQDPLTIK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           AFQYD+VCNG E++SG IRNH  +VM++AF   G     VE RFGG+  AF+ G PPHGG
Sbjct: 474 AFQYDIVCNGIELSSGAIRNHQPDVMIRAFEIAGYPASEVEARFGGMLNAFRYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPK 596
            A G+DRIVMLL    N+REV LFP++Q   DL+MG+P+ V  ++L+EL L + +  PK
Sbjct: 534 SAPGVDRIVMLLADEPNIREVILFPLNQQGEDLMMGAPAPVEPQRLKELSLALDLPRPK 592


>gi|188583675|ref|YP_001927120.1| aspartyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|238692885|sp|B1ZFX6|SYD_METPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|179347173|gb|ACB82585.1| aspartyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 604

 Score =  641 bits (1654), Expect = 0.0,   Method: Composition-based stats.
 Identities = 334/604 (55%), Positives = 423/604 (70%), Gaps = 8/604 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  SDVG  VRLSGW HR+R HGG++F+D+RDHYG+TQ V + DS  F+
Sbjct: 1   MHRYRTHTCGALRPSDVGQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVIDSDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++ RSEWV+ IDG V +R A T NA + TG +E+    +E+L  A ELPLPVFG++EY
Sbjct: 61  AAETARSEWVIRIDGRVRTRPAGTENAELPTGSVEVYIDDLEVLGPAGELPLPVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYRFLDLRR+ LH NI+KR  II+S+R RM    F E  TPILTASSPEGARD+
Sbjct: 121 PEETRLKYRFLDLRREKLHANIMKRGAIIDSLRRRMREGGFFEFQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   +E VLRGVFEEF+NG  V+  F RI Y DA+ +YG DKPDLRNP+I+ 
Sbjct: 241 MSFVTQEDVFQAVEPVLRGVFEEFANGKRVTKEFPRITYADAMLKYGVDKPDLRNPLIIA 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           +VT+ F        +    +  G  V AIPA G  G  R+F D++N+WARS+G PGL YI
Sbjct: 301 DVTDEFADDAVEFKAFKGVIKSGGVVRAIPATGAAGQPRSFFDKLNDWARSEGAPGLGYI 360

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  +E G + G GP+AK +       I  +   + GD+ FF AG   K  + A  AR  
Sbjct: 361 VF-EEEGGALTGKGPIAKFIPPEIQARIAQKAGAKAGDAVFFAAGTEAKAAALAGKARIR 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP---QGGMESLKGNDLLS 476
           I  EL + + + F FCW++DFP YEWNEE+KKIDF+HNPF+MP   +    +L   D   
Sbjct: 420 IGDELKLSDTDQFAFCWVVDFPMYEWNEEDKKIDFSHNPFSMPNYDRDAFLALGEEDAEK 479

Query: 477 ---IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              IKAFQYD+VCNG E++SG IRNH  +VM +AF+  G  ++V+E +FGG+  A + G 
Sbjct: 480 ILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRDVLEEKFGGMLNALRLGA 539

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DRIVMLL    N+REV LFPM+Q   DL+MG+P+  + +QLREL +R+  
Sbjct: 540 PPHGGIAPGVDRIVMLLCEEPNIREVVLFPMNQRAEDLMMGAPAEATPKQLRELHIRLNL 599

Query: 594 NPKK 597
             KK
Sbjct: 600 PEKK 603


>gi|218532262|ref|YP_002423078.1| aspartyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|254563332|ref|YP_003070427.1| aspartate tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254781740|sp|B7KN33|SYD_METC4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218524565|gb|ACK85150.1| aspartyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|254270610|emb|CAX26613.1| aspartate tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 604

 Score =  641 bits (1653), Expect = 0.0,   Method: Composition-based stats.
 Identities = 331/605 (54%), Positives = 421/605 (69%), Gaps = 8/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG +  SDVG  VRLSGW HR+R HGG++F+D+RDHYG+TQ V + DS  F+
Sbjct: 1   MHRYRTHTCGAIRPSDVGQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVIDSDSKAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++ RSEWV+ IDG V +R A T NA + TG +E+    +E+L  A ELPLPVFG++EY
Sbjct: 61  AAETARSEWVIRIDGRVRTRPAGTENAELPTGSVEVYIDDLEVLGPAGELPLPVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYRFLDLRR+ LH NI+KR  I++S+R RM    F E  TPILTASSPEGARD+
Sbjct: 121 PEETRLKYRFLDLRREKLHANIMKRGAIVDSLRRRMREGGFFEFQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   +E VLRGVFEEF+ G  V+  F RI Y DA+ +YG DKPDLRNP+I+ 
Sbjct: 241 MSFVTQEDVFQAVEPVLRGVFEEFAGGKRVTKEFPRITYADAMLKYGVDKPDLRNPLIIA 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           +VT+ F        +    +  G  V AIPA G  G  R+F D++N+WARS+G PGL YI
Sbjct: 301 DVTDEFADDAVEFKAFKGVIKSGGVVRAIPATGAAGQPRSFFDKLNDWARSEGAPGLGYI 360

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  +E G + G GP+AK +       I  +   + GD+ FF AG   K    A  AR  
Sbjct: 361 VF-EEEGGALTGKGPIAKFIPAAIQARIAEKAGAKAGDAVFFAAGTEAKAAGLAGKARIR 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP---QGGMESLKGNDLLS 476
           I  EL + + + F FCW++DFP YEWNEE+KKIDF+HNPF+MP   +    +L   D   
Sbjct: 420 IGDELKLSDTDQFAFCWVVDFPMYEWNEEDKKIDFSHNPFSMPNFDRDEFLALGEADSEK 479

Query: 477 ---IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              IKAFQYD+VCNG E++SG IRNH  +VM +AF+  G  ++V+E +FGG+  A + G 
Sbjct: 480 ILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRDVLEEKFGGMLNALRLGA 539

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DRIVMLL    N+REV LFPM+Q   DL+MG+P+  + +QLREL +R+  
Sbjct: 540 PPHGGIAPGVDRIVMLLCEEPNIREVVLFPMNQRAEDLMMGAPAEATPKQLRELHIRLNL 599

Query: 594 NPKKI 598
             KK 
Sbjct: 600 PEKKA 604


>gi|225175513|ref|ZP_03729507.1| aspartyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225168842|gb|EEG77642.1| aspartyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 590

 Score =  641 bits (1653), Expect = 0.0,   Method: Composition-based stats.
 Identities = 234/596 (39%), Positives = 346/596 (58%), Gaps = 10/596 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFE 60
           ++R   CG++    VG  V L+GWV R R HG +IFLD+RD  G+ QVV N   +   F 
Sbjct: 2   QFRDIYCGEVKKEMVGQTVTLNGWVQRRRDHGKLIFLDLRDRSGLVQVVFNFEQNEEMFA 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+VL + G V++RS ETIN  + TG+IE+ A+ +EIL+ A+  P  +    + 
Sbjct: 62  RAEEIRSEFVLTVRGQVVNRSEETINPKLPTGEIEVQAESLEILNKAKTPPFYIEDGVDV 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E++R KYR+LDLRR  + ++++ R ++    R  +  E F+E  TP+LT S+PEGARD+
Sbjct: 122 DENVRLKYRYLDLRRPEMQQSMIMRHKVSKLTRDFLDGEGFLEVETPMLTRSTPEGARDY 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRVN GSFYALPQ+PQ +KQL+M SG +RYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 182 LVPSRVNPGSFYALPQSPQLFKQLMMVSGAERYFQIARCFRDEDLRADRQP-EFTQIDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF +Q+ IL  ME ++  +FE   +   +   F R+ Y +A+ RYG+DKPD R  + + 
Sbjct: 241 LSFCDQEMILGMMEGLMAHLFEGVLD-EQIPTPFPRLSYREAMERYGSDKPDTRFGMELK 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+      +F+VF ++LS     +       GG  +R   D +  +    G  GLAY+F
Sbjct: 300 DVSGLVSDVDFKVFKQVLSSGGVVKGINATGCGG-FSRRELDELTAFVAQYGAKGLAYMF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                        P+AK  +      I   +D + GD   F+A             R H+
Sbjct: 359 VE-----EGGVRSPIAKFFSEDVLSEIVSAMDGKPGDLLLFVADKLDVAYHALGALRLHL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + LG+I+ +   F W++DFP   W+E+EK+    H+PFT P+         +  ++ A 
Sbjct: 414 GERLGLIDKSKRNFLWVVDFPLLFWDEDEKRYVANHHPFTAPRDEDLDKLETEAQNVLAK 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV +G EI  G +R +  E+  Q F  +G + E    +FG L  AF+ G PPHGGIA
Sbjct: 474 AYDLVLDGVEIGGGSLRIYRREIQEQMFKLLGFTPESAREQFGFLMDAFEYGTPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VML+ G  ++R+V  FP + +   L+  +PS V   QL+EL + +   PK
Sbjct: 534 FGLDRLVMLMAGKDSIRDVIAFPKTASASCLMTQAPSEVDARQLKELHIALDVPPK 589


>gi|320530173|ref|ZP_08031243.1| aspartyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320137606|gb|EFW29518.1| aspartyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 602

 Score =  641 bits (1653), Expect = 0.0,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 350/597 (58%), Gaps = 11/597 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
            RTH CG L    VG  V L GWV R R HGG+IF+D+RD  G+ Q+V +        F 
Sbjct: 8   KRTHGCGTLRKEHVGGKVSLCGWVSRRRDHGGLIFVDMRDRSGLVQIVFDEAVMAGGTFH 67

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+++RSE+V+ + G V +RSA+T+N N+ TG++E+   ++ IL+ A+  P  +    + 
Sbjct: 68  DAETLRSEFVIAVRGSVRARSADTVNPNMETGEVEIVVSELRILNKAKTPPFYIQDGIDV 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR +YR+LDLRR  +  NI+ R R+   MR       F+E  TP+L  S+PEGARDF
Sbjct: 128 DEMIRLRYRYLDLRRPEMQANIMLRHRVAKIMRDFFDRNGFLEIETPMLCKSTPEGARDF 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQ+PQ +KQLLM SGF++YFQI  CFRDED R+DR P EF QLD+E
Sbjct: 188 LVPSRLNAGEFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQP-EFTQLDIE 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF++Q+ IL+ ME +++ VFE+      +     R+ +D+A+ R+G+DKPDLR  + + 
Sbjct: 247 MSFMDQESILSLMEELVKEVFEKTLGA-HIETPLPRMSWDEAMERFGSDKPDLRFGMELQ 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T++   SEF+VF+ ++      +V  +        R   D +  + ++ G  GLA+I 
Sbjct: 306 DITDYVGGSEFKVFNAVMEAGGRVKVINVEGY-ANIPRRELDGLVTYVQNYGAKGLAWIQ 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +            P  K       + I+  +  + GD    +A  P        + R  +
Sbjct: 365 YT-----EEGVKSPFKKFYADETFDTIKNAVGAKTGDLLLVVADQPAVVAQALGELRLEM 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +  G+I+ +   F W++DFP +E++ EEK+    H+PFT P+     +   D   +KA 
Sbjct: 420 GRRRGLIDPDALSFLWVVDFPMFEYSAEEKRYKAMHHPFTAPRDEDIPMLATDPGKVKAN 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R + S++  Q F  +G+S E    +FG +  AF+ G PPHGG+A
Sbjct: 480 AYDMVLNGVEIGGGSLRIYRSDLQEQVFETLGLSPEEAREKFGFMMNAFEYGTPPHGGLA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QLREL +R     KK
Sbjct: 540 FGLDRLVMLMAKRRSIRDVIPFPKTQSASDVMCQAPSPVDEKQLRELYIRTAVPKKK 596


>gi|15613815|ref|NP_242118.1| aspartyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|20139936|sp|Q9KDG1|SYD_BACHD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|10173868|dbj|BAB04971.1| aspartyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 595

 Score =  641 bits (1653), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/597 (39%), Positives = 347/597 (58%), Gaps = 10/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG L    V   V+L GWV R R  G +IF+D+RD  G+ Q+V N D      E A
Sbjct: 4   RTHHCGQLSEEQVNERVQLKGWVQRRRDLGQVIFVDLRDRSGVVQLVFNSDISQEALETA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+VL ++G+V+ R   T+N  I TG IE+  +++ IL+ A+ LP  +    +  E
Sbjct: 64  EKVRNEYVLDVEGVVLKRDPSTVNDKIATGTIEVHVERLTILNKAKSLPFQIEANTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + + +  R +    +R  +  + F E  TP+LT S+PEGARD+LV
Sbjct: 124 DIRLKYRYLDLRRPDMQETMKLRHQTTKLIRDFLDGQEFFEIETPMLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SGF+RY+QI  CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHHGEFYALPQSPQIFKQLLMVSGFERYYQIVRCFRDEDLRADRQP-EFTQIDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++D+L   EN++  + +E    + V+  F R+ YDDA+ RYG+DKPD R  + +  +
Sbjct: 243 FMDKEDLLTMTENMMAKIMKEVKGLD-VALPFPRMTYDDAMNRYGSDKPDTRFEMELIEL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++    S+F+VFS  +      +   +    G  +R   D + E+ +  G  GLA++   
Sbjct: 302 SDIVKDSDFKVFSSAIKSGGIVKGLNLKGGAGSLSRKEIDGLAEFVKPYGAKGLAWLKV- 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G +   GP+AK         ++  +  +DGD  FF A             R  + +
Sbjct: 361 --EEGELK--GPIAKFFAGETGAELQQAMGAEDGDLLFFAADKKEVVFDSLGALRLKLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +  +I+ + F F W++DFP  E++EE K+    H+PFT P+    +    D  S++A  Y
Sbjct: 417 DFNLIDESKFNFLWVVDFPLVEYDEEAKRFVALHHPFTSPKQEDLTKLETDPASVRADAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G  R +   V  + F+ +G ++E  +  FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSQRIYQRPVQEKMFAALGFTEEAAQKEFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV-ENPKKI 598
           +DR+VMLL G  N+R+   FP + +   LL  +P  VS+EQL +L L I+   P K+
Sbjct: 537 LDRLVMLLAGRLNLRDTIAFPKTASASCLLTEAPGEVSLEQLLDLNLSIIGHKPDKV 593


>gi|238751587|ref|ZP_04613077.1| Aspartyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238710149|gb|EEQ02377.1| Aspartyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 598

 Score =  641 bits (1653), Expect = 0.0,   Method: Composition-based stats.
 Identities = 222/603 (36%), Positives = 332/603 (55%), Gaps = 9/603 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGID--LGDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   ++    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDAKGRVAALRVPGGAQLTRKIIDEYGQFVSIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    +AI  R   + GD  FF A             R  + ++
Sbjct: 357 RAAGMEGVQSPIAKFLSAEVLDAILTRTQAESGDILFFGADSYKIVTDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     +   W++DFP +E ++ E  +   H+PFT P+            +  A  YD
Sbjct: 417 LQLTQLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKDMSPEQLAAAPTTAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+  Q F  +GI++     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISV 603
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V   KK      
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV--AKKAATDGA 593

Query: 604 TTI 606
              
Sbjct: 594 EAE 596


>gi|239787493|emb|CAX83963.1| Aspartyl-tRNA synthetase [uncultured bacterium]
          Length = 600

 Score =  641 bits (1653), Expect = 0.0,   Method: Composition-based stats.
 Identities = 328/607 (54%), Positives = 432/607 (71%), Gaps = 10/607 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG+L     G+  RLSGWVHR R HG ++F+D+RDHYGITQ V +  S  F+
Sbjct: 1   MHRYRTHTCGELRAPHAGAAARLSGWVHRKRDHGNLLFVDLRDHYGITQAVMDISSPVFQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + +R E V+C+ G V  RSA+T+N  I TG IEL   + E+LSVA+ LP+ V GE+E+
Sbjct: 61  ILEGLRPESVVCLTGTVAERSADTVNPKIPTGAIELKVTEAEVLSVADVLPILVHGEQEF 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+T+H+N++ R+ +I S+R RM+ + FIE  TPILTASSPEGARD+
Sbjct: 121 PEDMRLRYRFLDLRRETVHRNMLLRSNVIASLRRRMLEQGFIEYQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 181 LVPSRIHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV QDD+ N +E VL GVFEEF+NG  VS   F RI YD+++ +YG+DKPDLRNP+++
Sbjct: 241 MSFVTQDDVFNAIEPVLAGVFEEFANGRQVSKAPFPRIPYDESMLKYGSDKPDLRNPLLI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F++  +++ G  V AIPA G  G  R++ D++NEWAR +G  GL Y
Sbjct: 301 SDVTEAFRASSFGIFAR--NIDKGSVVRAIPAPGAAGKPRSWFDKLNEWARGEGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +   E G     GP+AK+L      AIR    ++DGD+ FF    P    +FA   R 
Sbjct: 359 IIY---EGGQGK--GPIAKNLEPARINAIRAATGVKDGDAVFFACDKPDAAAAFAGQVRA 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  EL ++  N F+FCW +DFPFYE + E  KI F+HNPF+MPQGG+E+L   D LS+K
Sbjct: 414 RVCDELDLLEKNVFKFCWTVDFPFYERDPETGKIGFSHNPFSMPQGGLEALNTKDPLSLK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH+ E+M +AF   G  +  VE  FGG+  AF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIELSSGAIRNHLPEIMYRAFEIAGYERAHVETHFGGMLNAFRFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
            A G+DRIVMLL    N+REV LFP +Q   D+LM +P++VS EQLR+L +++ + PK  
Sbjct: 534 AAPGVDRIVMLLADEPNIREVILFPFNQQAQDILMQAPASVSPEQLRDLHIKL-DLPKAK 592

Query: 599 LKISVTT 605
           +K   + 
Sbjct: 593 IKSGESA 599


>gi|163853404|ref|YP_001641447.1| aspartyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163665009|gb|ABY32376.1| aspartyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 614

 Score =  641 bits (1653), Expect = 0.0,   Method: Composition-based stats.
 Identities = 331/605 (54%), Positives = 421/605 (69%), Gaps = 8/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG +  SDVG  VRLSGW HR+R HGG++F+D+RDHYG+TQ V + DS  F+
Sbjct: 11  MHRYRTHTCGAIRPSDVGQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVIDSDSKAFK 70

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++ RSEWV+ IDG V +R A T NA + TG +E+    +E+L  A ELPLPVFG++EY
Sbjct: 71  AAETARSEWVIRIDGRVRTRPAGTENAELPTGSVEVYIDDLEVLGPAGELPLPVFGDQEY 130

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYRFLDLRR+ LH NI+KR  I++S+R RM    F E  TPILTASSPEGARD+
Sbjct: 131 PEETRLKYRFLDLRREKLHANIMKRGAIVDSLRRRMREGGFFEFQTPILTASSPEGARDY 190

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 191 LVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 250

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   +E VLRGVFEEF+ G  V+  F RI Y DA+ +YG DKPDLRNP+I+ 
Sbjct: 251 MSFVTQEDVFQAVEPVLRGVFEEFAGGKRVTKEFPRITYADAMLKYGVDKPDLRNPLIIA 310

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           +VT+ F        +    +  G  V AIPA G  G  R+F D++N+WARS+G PGL YI
Sbjct: 311 DVTDEFADDAVEFKAFKGVIKSGGVVRAIPATGAAGQPRSFFDKLNDWARSEGAPGLGYI 370

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  +E G + G GP+AK +       I  +   + GD+ FF AG   K    A  AR  
Sbjct: 371 VF-EEEGGALTGKGPIAKFIPAAIQARIAEKAGAKAGDAVFFAAGTEAKAAGLAGKARIR 429

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP---QGGMESLKGNDLLS 476
           I  EL + + + F FCW++DFP YEWNEE+KKIDF+HNPF+MP   +    +L   D   
Sbjct: 430 IGDELKLSDTDQFAFCWVVDFPMYEWNEEDKKIDFSHNPFSMPNFDRDEFLALGEADSEK 489

Query: 477 ---IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              IKAFQYD+VCNG E++SG IRNH  +VM +AF+  G  ++V+E +FGG+  A + G 
Sbjct: 490 ILEIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRDVLEEKFGGMLNALRLGA 549

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DRIVMLL    N+REV LFPM+Q   DL+MG+P+  + +QLREL +R+  
Sbjct: 550 PPHGGIAPGVDRIVMLLCEEPNIREVVLFPMNQRAEDLMMGAPAEATPKQLRELHIRLNL 609

Query: 594 NPKKI 598
             KK 
Sbjct: 610 PEKKA 614


>gi|37526023|ref|NP_929367.1| aspartyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|46577166|sp|Q7MB41|SYD_PHOLL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|36785453|emb|CAE14400.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase) (asprs)
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 590

 Score =  641 bits (1653), Expect = 0.0,   Method: Composition-based stats.
 Identities = 220/593 (37%), Positives = 335/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L ++  G  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    F  A 
Sbjct: 2   RTDYCGQLNLTHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQQAAFSQAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG+IE+ A+ + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMATGEIEVFAESLNIINRSEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR++DLRR  +   +  R +I + +R  M  + F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYIDLRRPEMANRLKTRAKITSFVRRFMDNQGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++R ++ E    +    +F  + + + +RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREMMEKMIRELWFEIDGVD--LGHFPVMTFAEVMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF++  + + G         G   +R   D   ++    G  GLA+I    
Sbjct: 297 DLVKDVEFSVFAEPANDSKGRVAVIRVPGGAELSRKQIDEYGKFVGIYGAKGLAWIKVNA 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    E +  R D QDGD  FF AG            R  + ++
Sbjct: 357 RAAGLEGVQSPIAKFLNAEVIEGLLSRTDAQDGDILFFGAGSVKVVTDALGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   + +   W++DFP +E ++ E  +   H+PFT P     +    D +S  A  YD
Sbjct: 417 LNLTKLDSWRPLWVIDFPMFE-DDGEGGLTAMHHPFTSPCNMSAAELAQDPVSAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+++  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRNEMQQAVFRILGINEQEQQEKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V   +
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSYANPASLEELSISVVAKKE 588


>gi|283785604|ref|YP_003365469.1| aspartyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282949058|emb|CBG88661.1| aspartyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 590

 Score =  641 bits (1653), Expect = 0.0,   Method: Composition-based stats.
 Identities = 224/594 (37%), Positives = 330/594 (55%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L  S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN+ + TG+IE+ A  + I++ AE   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINSEMATGEIEVLASDLTIINRAES--LPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREVMEALVRNLWLEVKGVD--LGDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFSGPANDPKGRVAALRVPGGASLSRKQIDDYGNFIKIYGAKGLAYIKVTE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGIEGITSPVAKFLNAEIVEAILQRTGAQDGDMIFFGADNKKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E ++ E  +   H+PFT P+    +          A  YD
Sbjct: 417 LNLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKEMTAAELKAAPEEAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+ +V+  +K
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELGIEVVKKAEK 589


>gi|237800215|ref|ZP_04588676.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331023072|gb|EGI03129.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 591

 Score =  641 bits (1653), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 345/593 (58%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G              R+  D   ++    G  GLAYI    
Sbjct: 300 DQLTGVEFKVFSGPANDPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +   N   I  R+   DGD  FF A             R  I  +
Sbjct: 360 RAKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGADKFKVVSEALGALRIKIGND 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +  C  +   W++DFP +E N++       H+PFT P+   E L+ N   +  +  YD
Sbjct: 420 LKLHTCE-WAPMWVVDFPMFEENDD-GSFTALHHPFTAPKCTPEELEAN-PATALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 537 DRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|238762973|ref|ZP_04623940.1| Aspartyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238698731|gb|EEP91481.1| Aspartyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 598

 Score =  641 bits (1653), Expect = 0.0,   Method: Composition-based stats.
 Identities = 221/592 (37%), Positives = 330/592 (55%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANALNIINRSEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGVD--LGDFPVMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   ++    G  GLA++    
Sbjct: 297 DLVKEVEFKVFSGPANDAKGRVAALRVPGGAQVTRKQIDEYGQFVSIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    EAI  R   + GD  FF A             R  + ++
Sbjct: 357 RAAGVEGVQSPIAKFLSAEVLEAILARTQAESGDILFFGADSYKIVTDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     +   W++DFP +E ++ E  +   H+PFT P+            +  A  YD
Sbjct: 417 LALTKLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKDMSPEQLAAAPTTAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+  Q F  +GI++     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V   
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVVAKK 587


>gi|220922152|ref|YP_002497453.1| aspartyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|254781741|sp|B8IUT2|SYD_METNO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219946758|gb|ACL57150.1| aspartyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 604

 Score =  641 bits (1653), Expect = 0.0,   Method: Composition-based stats.
 Identities = 331/603 (54%), Positives = 423/603 (70%), Gaps = 8/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  SDVGS VRLSGW HRVR HGG++F+D+RDHYG+TQ V + DS  F 
Sbjct: 1   MHRYRSHTCGALRPSDVGSTVRLSGWCHRVRDHGGVLFIDLRDHYGLTQCVVDADSPAFR 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VRSEWV+ IDG V  R A T N ++ TG +E+    +E+L  A ELP+PVFG+ +Y
Sbjct: 61  AAEAVRSEWVIRIDGRVRQRPAGTENPDLPTGAVEVYIADLEVLGHAVELPMPVFGDLDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YRFLDLRR+ LH NI+KR  II+S+R RM    F E  TPILTASSPEGARDF
Sbjct: 121 PEETRLRYRFLDLRREKLHANIMKRGAIIDSLRRRMREGGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   +E VLRGVFEEF++G  V+ +F RI Y +A+ +YG DKPDLRNP+++ 
Sbjct: 241 MSFVTQEDVFQAVEPVLRGVFEEFADGWRVTQSFPRIPYAEAMLKYGVDKPDLRNPLLIV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           +VTE F        +    +  G  V AIPA G     R+F D++N+WARS+G PGL YI
Sbjct: 301 DVTEEFSAEAVTFNAFKNLIRAGGVVRAIPAPGAASQPRSFFDKLNDWARSEGAPGLGYI 360

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  +E G + G GP+AK +      AI  +  ++ GD+ FF AG   K    A  AR  
Sbjct: 361 VF-EEEGGQLIGRGPIAKFVPAEVQAAIAGKAGLKAGDAVFFSAGTEAKAAGLAGKARIR 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL----- 474
           I  +LG+ + + F FCWI DFP YEWNE+EK+IDF+HNPF+MP    ++    D      
Sbjct: 420 IGDDLGLSDKDQFAFCWITDFPMYEWNEDEKRIDFSHNPFSMPNYDHKAFLALDPADADT 479

Query: 475 -LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
            L IKAFQYD+VCNG E++SG IRNH  +VM +AF+  G  ++V+E +FGG+  A + G 
Sbjct: 480 ILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRDVLEQKFGGMLNALRMGA 539

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DRIVMLL    N+REV LFPM+Q   DL+MG+PS V+ +QLREL +R+  
Sbjct: 540 PPHGGIAPGVDRIVMLLCHEPNIREVVLFPMNQRAEDLMMGAPSEVTAKQLRELHIRLNL 599

Query: 594 NPK 596
             K
Sbjct: 600 PEK 602


>gi|331016436|gb|EGH96492.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 591

 Score =  641 bits (1653), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 345/593 (58%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDVEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G              R+  D   ++    G  GLAYI    
Sbjct: 300 DQLNAVEFKVFSGPANDPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +   N   I  R+   DGD  FF A             R  I  +
Sbjct: 360 RAKGPEGLQSPIVKFIPEENLNVILDRVGAADGDIVFFGADKFKVVSEALGALRIKIGND 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +  C  +   W++DFP +E N++       H+PFT P+   E L+ N   +  +  YD
Sbjct: 420 LKLHTCE-WAPMWVVDFPMFEENDD-GSFSALHHPFTAPKCSPEELEAN-PATALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 537 DRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|292669402|ref|ZP_06602828.1| aspartate-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648963|gb|EFF66935.1| aspartate-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 602

 Score =  640 bits (1652), Expect = 0.0,   Method: Composition-based stats.
 Identities = 234/602 (38%), Positives = 350/602 (58%), Gaps = 11/602 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
            RTH CG L    V   V L GWV R R HGG+IF+D+RD  G+ Q+V +  +     F 
Sbjct: 8   KRTHDCGTLRKEQVSEEVTLCGWVSRRRDHGGLIFVDMRDRSGLVQIVFDEAAMAEGTFH 67

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+++RSE+V+C+ G+V +RSA+T+N N+ TG +E+   ++ IL+ A+  P  +    + 
Sbjct: 68  EAETLRSEFVICVRGMVRARSADTVNPNMATGDVEIVVNELRILNKAKTPPFYIQDGIDV 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR +YR+LDLRR  +  N++ R R+   MR       F+E  TP+L  S+PEGARDF
Sbjct: 128 DEMIRLRYRYLDLRRPEMQANMILRHRVTKIMRDFFDRSGFLEIETPMLCKSTPEGARDF 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQ+PQ +KQLLM SGF++YFQI  CFRDED R+DR P EF QLD+E
Sbjct: 188 LVPSRLNAGEFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQP-EFTQLDIE 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF++QD IL  ME +++ +FE+          F R+ +D+A+ R+G+DKPDLR  + + 
Sbjct: 247 MSFMDQDSILTLMEEMVKELFEKSIGAKI-ETPFRRMAWDEAMERFGSDKPDLRFGMELQ 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T++   SEF+VF+ +L      +V  +        R   D +  + ++ G  GLA+I 
Sbjct: 306 DITDYVGGSEFKVFNSVLEAGGRVKVINVEGY-ANIPRRELDGLVSYVQNYGAKGLAWIQ 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +            P  K  +    E I+  +  + GD    +A  P        + R  +
Sbjct: 365 Y-----SEEGVKSPFKKFYSDETFETIKNAVGAKTGDLLLVVADQPAVVAQALGELRLEM 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +   +I+ N   F W++DFP +E++ EEK+    H+PFT P+     L   D   +KA 
Sbjct: 420 GRRRNLIDPNALSFLWVVDFPMFEYSAEEKRFKAMHHPFTAPRDEDIPLLATDPGRVKAN 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R + S++  Q F  +G + E    RFG +  AF+ G PPHGG+A
Sbjct: 480 AYDMVLNGVEIGGGSLRIYRSDLQEQVFETLGFTPEEARERFGFMMNAFEYGTPPHGGLA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QLREL +R     KK   
Sbjct: 540 FGLDRLVMLMAKRRSIRDVIPFPKTQSASDVMCEAPSPVDEKQLRELYIRTAVPKKKADS 599

Query: 601 IS 602
            +
Sbjct: 600 AT 601


>gi|53804174|ref|YP_114214.1| aspartyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|62287536|sp|Q607I4|SYD_METCA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|53757935|gb|AAU92226.1| aspartyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 599

 Score =  640 bits (1652), Expect = 0.0,   Method: Composition-based stats.
 Identities = 234/592 (39%), Positives = 345/592 (58%), Gaps = 5/592 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG++  S +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F +A+
Sbjct: 2   RSHRCGEVNESLLGQEVGLCGWVHRRRDHGGVIFVDLRDREGLVQVVFDPDHPEPFSLAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +VRSE+V+ + G V +R   T N N+ +G++E+ A  +EIL+ +E  P P+  + E  E 
Sbjct: 62  TVRSEYVIRVVGQVRARPEGTENPNLKSGRVEVLATSLEILNRSETPPFPIESDIEVNEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR++DLRR  + + +  R  I   +R  +    F E  TP LT ++PEGARD+LVP
Sbjct: 122 MRLRYRYIDLRRPVMQQRMRLRRDITRFLRNFLDHHGFYEIETPFLTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR +  SF+ALPQ+PQ YKQLLM SG DRY+Q+  CFRDED R+DR P EF QLD+E SF
Sbjct: 182 SRTHPHSFFALPQSPQLYKQLLMISGMDRYYQVVRCFRDEDLRADRQP-EFTQLDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D I+  ME ++R +F E  N   + + F R+ Y +A+RRY +DKPDLR P+ + ++ 
Sbjct: 241 MNEDQIMTLMEAMIRDLFRETLNEE-LPDPFPRMTYAEAMRRYASDKPDLRIPLELVDIA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF+   +   G  V      GG  +R   D +  +    G  GLAY+    
Sbjct: 300 DLMAGVEFKVFAGPAADPEGRVVALKLPGGGDLSRKDIDDLTRFVGIYGAKGLAYVKVND 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K +       I  R + Q GD  FF A             R  + Q+
Sbjct: 360 LGAGLEGLQSPILKFMPESTIRGILERTEAQTGDLIFFGADKARIVNESMGALRVKLGQD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G++    +   W+ DFP +EW+E+  +    H+PFT P+   E L+ N      +  YD
Sbjct: 420 RGLVEKG-WRPLWVTDFPMFEWDEKSGRWVALHHPFTAPKCSEEQLRQN-PGRALSRAYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G +R H +E+    F  +GI +E  + +FG L  A + G PPHGG+A G+
Sbjct: 478 MVLNGTEIGGGSVRIHRTEMQQTVFDLLGIGEEEAQQKFGFLLNALRYGCPPHGGLAFGL 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VML+ GA ++REV  FP +Q+    L+ +P+ V+  QL ELG+R+ +NP
Sbjct: 538 DRLVMLMSGASSIREVMAFPKTQSAWCPLIDAPAQVNDAQLHELGIRLRKNP 589


>gi|28871126|ref|NP_793745.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|37999385|sp|Q87Y31|SYD_PSESM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|28854376|gb|AAO57440.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 591

 Score =  640 bits (1652), Expect = 0.0,   Method: Composition-based stats.
 Identities = 238/593 (40%), Positives = 345/593 (58%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  N      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLNVEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G              R+  D   ++    G  GLAYI    
Sbjct: 300 DQLNAVEFKVFSGPANDPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +   N   I  R+   DGD  FF A             R  I  +
Sbjct: 360 RAKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGADKFKVVSEALGALRIKIGND 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +  C  +   W++DFP +E N++       H+PFT P+   E L+ N   +  +  YD
Sbjct: 420 LKLHTCE-WAPMWVVDFPMFEENDD-GSFSALHHPFTAPKCTPEELEAN-PATALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 537 DRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|154686896|ref|YP_001422057.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166225318|sp|A7Z750|SYD_BACA2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|154352747|gb|ABS74826.1| AspS [Bacillus amyloliquefaciens FZB42]
          Length = 592

 Score =  640 bits (1652), Expect = 0.0,   Method: Composition-based stats.
 Identities = 235/596 (39%), Positives = 346/596 (58%), Gaps = 10/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+ CG++    +G  V+L GWV + R  GG+IF+D+RD  GI QVV NPD        A
Sbjct: 4   RTYYCGEITEKAIGETVKLKGWVQKRRDLGGLIFIDLRDRSGIVQVVFNPDVSKEALAAA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           +++R+E+VL I+G V +R   T+N N+ TG+IE+ A+ + +LS A+  P P+  +  +  
Sbjct: 64  EAIRNEYVLDIEGTVSAREEGTVNPNLKTGKIEIKAEAVTVLSTAKTPPFPISDQAADVS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R K+R+LDLRR  + + +  R ++  S+R  +    F++  TPILT SSPEGARD+L
Sbjct: 124 EDVRLKHRYLDLRRPAMFQTLQMRHQVTKSIRHFLDENGFLDIETPILTKSSPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGF+RY+Q+A CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQIFKQLLMVSGFERYYQVARCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI+   E ++  V  E      V     R+ Y++A+  YG+DKPD R  +++ +
Sbjct: 243 SFMSQEDIMALAEEMMAKVMLETKGVE-VPLPLPRMTYEEAMNSYGSDKPDTRFGMLLTD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V++    +EF+VFS  ++     +   +    G  +R   D +  +A + G  GLA++  
Sbjct: 302 VSDIVKDTEFKVFSSAVANGGVVKAINVKGAAGDYSRKDIDALGVFAGNYGAKGLAWVKV 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK  +      +   L+  +GD   F A             R  + 
Sbjct: 362 EAD-----GVKGPIAKFFDEEKQAKLAEALEASEGDLLLFGADKFEVVAQSLGALRLKLG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +E G+I+ + F F W++D+P  E +EEE +   AH+PFTMP      L       +KA  
Sbjct: 417 KERGLIDESLFNFLWVVDWPLLEHDEEEGRFYAAHHPFTMPVREDLDLIETAPEDMKAQA 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+  G IR    +V  + F  +G +KE  E  FG L  AF+ G PPHGGIA 
Sbjct: 477 YDLVLNGYELGGGSIRIFEKDVQEKMFGLLGFTKEEAEEEFGYLLEAFEYGAPPHGGIAL 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VMLL G  N+R+   FP + +   LL  +P  VS  QL EL L +    K+
Sbjct: 537 GLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPGEVSDAQLEELHLSVKRKVKQ 592


>gi|330502216|ref|YP_004379085.1| aspartyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328916502|gb|AEB57333.1| aspartyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 590

 Score =  640 bits (1652), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/593 (39%), Positives = 340/593 (57%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 2   RSHYCGQLNESLDGQEITLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRAETFAKAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R     NAN+ +G IE+   ++E+L+ AE  P P+    +  E 
Sbjct: 62  RVRSEYVVKITGKVRLRPEGARNANMASGAIEVLGYELEVLNEAETPPFPLNEYTDVGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI +S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 TRLRYRFIDLRRPEMAEKLKLRSRITSSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI++  E ++R +F+E       +     +   +A+RR+G+DKPDLR P+ + +V 
Sbjct: 241 LDEKDIMDITETMVRNLFKEVLGVEFGAL--PHMTLAEAMRRFGSDKPDLRIPLELVDVE 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF+   +             G    R   D   ++    G  GLAYI    
Sbjct: 299 DQLKDVEFKVFAGPANDPKCRVTALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K++ + N   I  R+   DGD  FF A             R  +  +
Sbjct: 359 RAAGVEGLQSPIVKNIPLDNINVILDRVGAVDGDIVFFGADKAKIVSEALGALRIKLGHD 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++ C  +   W++DFP +E N++   +   H+PFT P    E L+ N   +  +  YD
Sbjct: 419 LNLLTCE-WAPLWVVDFPMFEENDD-GSLTAMHHPFTSPSCSPEELEAN-PAAALSRAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H   +    F  +GIS+E  + +FG L  A + G PPHGG+A G+
Sbjct: 476 MVLNGTELGGGSIRIHDKAMQQTVFRVLGISEEEQQEKFGFLLDALKYGAPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+   ++  +P  V  + LREL +R+ E PK
Sbjct: 536 DRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGVVDGKSLRELHIRLREQPK 588


>gi|120554627|ref|YP_958978.1| aspartyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|166225355|sp|A1U1C2|SYD_MARAV RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|120324476|gb|ABM18791.1| aspartyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 599

 Score =  640 bits (1652), Expect = 0.0,   Method: Composition-based stats.
 Identities = 227/603 (37%), Positives = 341/603 (56%), Gaps = 7/603 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  S +   V L GWVHR R HGG+IFLD+RD  G++QVV +PD+   F +A+
Sbjct: 2   RSHYCGGINESHIDQEVTLCGWVHRRRDHGGVIFLDLRDRDGMSQVVVDPDTPESFALAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V  R A T N N+ TGQ+EL  +++ IL+ A   P P+    +  E 
Sbjct: 62  KVRSEFVIKVTGRVRRRPAGTENNNMPTGQVELLGKELVILNAAATPPFPLDEHVDVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YRF+DLRR  +   +  R+R+ + +R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLRYRFVDLRRPEMINRLRFRSRVTSYIRNFLDSRGFMDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++GSF+ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQP-EFTQVDIEASF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ ++   E ++R +F++  +       F R+ Y +A++RYG+DKPDLR P+ + +V 
Sbjct: 241 IDEETLMGLNEEMIRSLFKDVLDVELPE--FPRMPYSEAMQRYGSDKPDLRIPLELQDVG 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF+       G        KG    R   D    +    G  GLAYI    
Sbjct: 299 DLVESVDFKVFAGPAKDPKGRVAALRVPKGAELTRKQIDDYTRFVGIYGAKGLAYIKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K L      AI  R+  +DGD  FF A             R  +  +
Sbjct: 359 LTKGAEGLQSPIVKFLGDDVALAIMERVGAEDGDIVFFGADKATVVNEALGALRIKVGHD 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++ C  +   W++DFP +E   +   +   H+PFT P    E L   D  +  +  YD
Sbjct: 419 LNMLTCE-WAPMWVVDFPMFEELPD-GNLTAIHHPFTAPSCSPEDL-AADPANALSRAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  ++    F  +GI +E    +FG L  A + G PPHGG+A G+
Sbjct: 476 MVLNGTELGGGSIRIHDEKMQEAVFRILGIGEEEARAKFGFLLDALKFGCPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISV 603
           DR+VML+ G+ ++R+V  FP +Q+   L+  +P  V  +QL+EL +R+  + K +     
Sbjct: 536 DRLVMLMTGSSSIRDVIAFPKTQSATCLMTQAPGEVDEKQLKELHIRLRRSAKAVEGNKA 595

Query: 604 TTI 606
              
Sbjct: 596 ENK 598


>gi|240140823|ref|YP_002965303.1| aspartate tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240010800|gb|ACS42026.1| aspartate tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 604

 Score =  640 bits (1652), Expect = 0.0,   Method: Composition-based stats.
 Identities = 331/605 (54%), Positives = 421/605 (69%), Gaps = 8/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG +  SDVG  VRLSGW HR+R HGG++F+D+RDHYG+TQ V + DS  F+
Sbjct: 1   MHRYRTHTCGAIRPSDVGQTVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVIDSDSKAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++ RSEWV+ IDG V +R A T NA + TG +E+    +E+L  A ELPLPVFG++EY
Sbjct: 61  AAETARSEWVIRIDGRVRTRPAGTENAELPTGSVEVYIDDLEVLGPAGELPLPVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYRFLDLRR+ LH NI+KR  I++S+R RM    F E  TPILTASSPEGARD+
Sbjct: 121 PEETRLKYRFLDLRREKLHANIMKRGAIVDSLRRRMREGGFFEFQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   +E VLRGVFEEF+ G  V+  F RI Y DA+ +YG DKPDLRNP+I+ 
Sbjct: 241 MSFVTQEDVFQAVEPVLRGVFEEFAGGKRVTKEFPRITYADAMLKYGVDKPDLRNPLIIA 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           +VT+ F        +    +  G  V AIPA G  G  R+F D++N+WARS+G PGL YI
Sbjct: 301 DVTDEFADDAVEFKAFKGVIKSGGVVRAIPATGAAGQPRSFFDKLNDWARSEGAPGLGYI 360

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  +E G + G GP+AK +       I  +   + GD+ FF AG   K    A  AR  
Sbjct: 361 VF-EEEGGALTGKGPIAKFIPAAIQARIAEKAGAKAGDAVFFAAGTEAKAAGLAGKARIR 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP---QGGMESLKGNDLLS 476
           I  EL + + + F FCW++DFP YEWNEE+KKIDF+HNPF+MP   +    +L   D   
Sbjct: 420 IGDELKLSDTDQFAFCWVVDFPMYEWNEEDKKIDFSHNPFSMPNFDRDEFLALGEADSER 479

Query: 477 ---IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              IKAFQYD+VCNG E++SG IRNH  +VM +AF+  G  ++V+E +FGG+  A + G 
Sbjct: 480 ILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRDVLEEKFGGMLNALRLGA 539

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DRIVMLL    N+REV LFPM+Q   DL+MG+P+  + +QLREL +R+  
Sbjct: 540 PPHGGIAPGVDRIVMLLCEEPNIREVVLFPMNQRAEDLMMGAPAEATPKQLRELHIRLNL 599

Query: 594 NPKKI 598
             KK 
Sbjct: 600 PEKKA 604


>gi|302391508|ref|YP_003827328.1| aspartyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203585|gb|ADL12263.1| aspartyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 596

 Score =  640 bits (1651), Expect = 0.0,   Method: Composition-based stats.
 Identities = 247/597 (41%), Positives = 368/597 (61%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           R + CG+L   ++   V L GWV R R HGG+IF+D+RD +G+ QVV +P      FE A
Sbjct: 9   RDYYCGELSSEEIDEEVTLMGWVQRRRDHGGLIFVDLRDRFGLVQVVFSPQEAKEAFEKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +R E+V+ + G V  R   TIN  + TG+IE++ ++IEILS A+  PL +  + E  E
Sbjct: 69  EDLRKEYVIAVTGKVARRPEGTINPELATGEIEVNVKEIEILSEADTPPLQIAEDSEVGE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + +NI+ R ++  ++R  +  E+F+E  TP+LT S+PEGARD+LV
Sbjct: 129 DLRLKYRYLDLRRPNMQENIILRHQVKKAVRNYLDEEDFLEIETPMLTKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQ+PQ +KQLLM SG +RY+QI  CFRDED R+DR P EF Q+DMEMS
Sbjct: 189 PSRVHRGKFYALPQSPQLFKQLLMVSGMERYYQITRCFRDEDLRADRQP-EFTQIDMEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++DD+++ +E +++ +F   + G     +F  + Y +A+ R+GTD+PDLR  + + +V
Sbjct: 248 FVDEDDVISLVEGMIQEIFA--TAGLEEPTDFAHMSYQEAMDRFGTDRPDLRFGLELVDV 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIFW 361
           +E    SEF VFS  ++     +   I AKG    +R   D + ++  + G  GLA+I  
Sbjct: 306 SEIVEDSEFNVFSGTIADGGEVK--GINAKGCADFSRKDLDDLTDYVGNYGAQGLAWIAL 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R D         P++K L+    E I+  ++ ++GD   F+A  P    +     R  +A
Sbjct: 364 RED-----GISSPISKFLSDEELEEIQNEMEAEEGDLLLFVADRPKVVAAALGHLRLKLA 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           Q L +I+ + F F WI DFP  E +E+E ++   H+PFT PQ     L  +    +KA  
Sbjct: 419 QRLDLIDQDEFNFVWITDFPLLERDEDEDRLVSLHHPFTAPQDEDIDLLDSKPTEVKAKA 478

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  ++  + F N+ ++ E ++N+FG L  AF  G PPHGGIA 
Sbjct: 479 YDLVLNGTEIGGGSIRIHDRDLQEKIFENLSLTDEEIDNKFGFLLEAFDYGTPPHGGIAF 538

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           G+DR+VMLL   + +R+V  FP +QN   LL  +PS V+ EQL EL L++ ++  ++
Sbjct: 539 GLDRLVMLLGKLETIRDVIAFPKTQNATCLLTEAPSRVAEEQLEELNLKVQDDEVEV 595


>gi|84514462|ref|ZP_01001826.1| aspartyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84511513|gb|EAQ07966.1| aspartyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 592

 Score =  640 bits (1651), Expect = 0.0,   Method: Composition-based stats.
 Identities = 333/595 (55%), Positives = 428/595 (71%), Gaps = 4/595 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL  +DVG  VRLSGWV+RVR HGGI+F+D+RDHYGITQV+ +PDSA F 
Sbjct: 1   MHAYRSHTCADLTAADVGKTVRLSGWVNRVRDHGGILFIDLRDHYGITQVLCDPDSAAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +RSE+ + IDG V +R A  +N  + TG+IE+  +++E+L  A+ELPL VFG++EY
Sbjct: 61  DVEKLRSEYCIRIDGEVKARDASLVNPKLPTGEIEVFIREVEVLGAAKELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYR+LDLRR+ +  N+  R+ ++ SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLKYRYLDLRREAMQSNMKLRSDVVASMRRRMWDKGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SG+D+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T++ V+ GVFEEF  G  V   + +I Y DA   YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQQDVFDTIQPVIGGVFEEFGGGRKVDQTWEQISYKDAALWYGTDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V++HF  S F +F+K+L  +   E+ AIPA  GG +R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSDHFRDSGFAIFAKLLEQDGT-EIRAIPAPTGG-SRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR    G +   GP+AK++    TEAIR +L +  GD+ FF+ G P  F + A  AR  I
Sbjct: 359 WRDQGEG-MEAAGPLAKNIGPERTEAIRQQLGLGLGDAAFFLGGKPKAFEAVAGRARTVI 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             ELG+ + + F F WI+DFP YE + E  KIDF HNPF+MPQGGME+L G D L+++ +
Sbjct: 418 GDELGLTDKDRFAFAWIVDFPIYEQDAETGKIDFEHNPFSMPQGGMEALSG-DPLAVRGY 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDL CNG+E+ SG IRNH  E+M +AF   G  ++ V  RFGG+  AFQ G PPHGG A
Sbjct: 477 QYDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVRKRFGGMVNAFQYGAPPHGGCA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           AGIDRIVMLL  A N+REV +FPM+Q   DL+MG+PS    EQLREL LR+V   
Sbjct: 537 AGIDRIVMLLADASNIREVIMFPMNQRAEDLMMGAPSEPMNEQLRELRLRVVPPE 591


>gi|213969182|ref|ZP_03397321.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|213926180|gb|EEB59736.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 590

 Score =  640 bits (1651), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 345/593 (58%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 2   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 62  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 241 LNEEDIIGLTEKMVRQLFKEVLDVEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G              R+  D   ++    G  GLAYI    
Sbjct: 299 DQLNAVEFKVFSGPANDPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +   N   I  R+   DGD  FF A             R  I  +
Sbjct: 359 RAKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGADKFKVVSEALGALRIKIGND 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +  C  +   W++DFP +E N++       H+PFT P+   E L+ N   +  +  YD
Sbjct: 419 LKLHTCE-WAPMWVVDFPMFEENDD-GSFSALHHPFTAPKCTPEELEAN-PATALSRAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A G+
Sbjct: 476 MVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 536 DRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 588


>gi|200390299|ref|ZP_03216910.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|199602744|gb|EDZ01290.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
          Length = 590

 Score =  640 bits (1650), Expect = 0.0,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 331/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADS--LPLDANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L     EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  YD
Sbjct: 417 LSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEGAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKKAE 588


>gi|74316460|ref|YP_314200.1| aspartyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|97196989|sp|Q3SLL2|SYD_THIDA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|74055955|gb|AAZ96395.1| aspartyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
          Length = 597

 Score =  640 bits (1650), Expect = 0.0,   Method: Composition-based stats.
 Identities = 232/592 (39%), Positives = 345/592 (58%), Gaps = 5/592 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RTH CG +  +DVG+ V L GW HR R HGG+IF+D+RD  G+ QVV +PD+   F++A+
Sbjct: 2   RTHYCGAVTAADVGNTVTLCGWAHRRRDHGGVIFIDLRDREGMVQVVVDPDTPAAFKLAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+VL I+G V  R A T N ++ TG +E+    +++L+ +   P  +  E    E+
Sbjct: 62  DVRAEFVLKIEGKVRPRPAGTENPHLPTGMVEVLTLDLDVLNPSLTPPFQIDDET-INEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR +YR+LDLRR+ + KN+  R R+   MR  +    F+E  TP+LT S+PEGARD+LVP
Sbjct: 121 IRLQYRYLDLRREPMQKNLKLRYRVSKIMRDYLDTHGFMEVETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SG DRYFQI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHDGMFYALPQSPQLFKQLLMVSGVDRYFQITKCFRDEDLRADRQP-EFTQVDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++ I+  +E ++R + ++      +   F R+ Y +A+ RYG+DKPDLR  + + +V 
Sbjct: 240 MGEEAIMGLVEGMIRDMMQKAQGIE-LPAAFPRMSYAEAMNRYGSDKPDLRVTLEIVDVG 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR- 362
           +      F+VF+   +   G         G   +R+  D   E+ +  G  GLAYI    
Sbjct: 299 DVMRDVAFKVFATPANDPKGRVAALRIPGGATLSRSEIDGYTEFVKIYGAKGLAYIKVND 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + +        P+ K+L+     A+  R   Q+GD  FF A             R  I  
Sbjct: 359 VGQLNEAGLQSPIVKNLSEAALHAVMERTGAQNGDLIFFGADRAKVVNDALGALRLKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E G ++   +   W++DFP +E+NE+E + D  H+PFT P+ G E     D     +  Y
Sbjct: 419 EKGHVDGRAWAPLWVVDFPMFEYNEDENRWDALHHPFTAPKDGHEDWLATDPGKCLSKAY 478

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H  +V  + F+ + I +E    +FG L  A Q G PPHGG+A G
Sbjct: 479 DMVLNGWEVGGGSVRIHREKVQEKVFAALNIGEEERREKFGFLLDALQYGAPPHGGLAFG 538

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+V L+ GA+++R+V  FP +Q    L+  +P+ V  +QLREL +R+   
Sbjct: 539 LDRLVTLMAGAESIRDVIAFPKTQRASCLMTNAPNVVDEKQLRELHIRLRNP 590


>gi|323139674|ref|ZP_08074715.1| aspartyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322395053|gb|EFX97613.1| aspartyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 592

 Score =  640 bits (1650), Expect = 0.0,   Method: Composition-based stats.
 Identities = 333/597 (55%), Positives = 430/597 (72%), Gaps = 7/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+   +  G  +RLSGW HR+R HGG++F+D+RDHYG+TQ V +PDS  F 
Sbjct: 1   MHRYRSHNCGEPTEALAGQKIRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVVDPDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSEWV+ +DG V  R A T N ++ TG +E+   +IE+L  A ELP+PVFG+++Y
Sbjct: 61  QAEKLRSEWVVRLDGEVRKRPAGTENPDMPTGHVEIYVAEIEVLGPAGELPMPVFGDQQY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYRFLDLRR+ LH NI+ R RII+S+R RM    F E  TPILTASSPEGARDF
Sbjct: 121 PEDTRLKYRFLDLRREKLHNNIMLRGRIIDSIRTRMKQGGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ ++ME VLRGVFEEF+NG  V+  F RI + +A+ +YG+DKPDLRNP+I+ 
Sbjct: 241 MSFVTQEDVFDSMEPVLRGVFEEFANGKAVTQKFPRIPFREAMLKYGSDKPDLRNPLIIV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           +++  F                G  V  IPA G     R+F D++N+WARS+G PGL YI
Sbjct: 301 DLSAEFEGEGVTF-----KAFRGKTVRGIPAPGAASQPRSFFDKLNDWARSEGAPGLGYI 355

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  DE G + G GP+AK +      AI  +  ++ GD+ FF AG+       A  AR  
Sbjct: 356 IF-EDEGGALVGKGPIAKFIPADAQAAIAAKAGVKAGDAVFFSAGEETAAAKLAGMARIR 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           I  ELG+   + FEFCWI+DFP YEWNE++KKIDF+HNPF+MPQGGME+L+  D L I A
Sbjct: 415 IGNELGLSKKDVFEFCWIVDFPMYEWNEDDKKIDFSHNPFSMPQGGMEALEEKDPLDILA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+M +AF   G  ++V+  +FGG+YRAFQ G PPHGGI
Sbjct: 475 YQYDIVCNGVELSSGAIRNHRPEIMKKAFEIAGYGEDVLIEKFGGMYRAFQYGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DRIVMLL   +N+REV+LFPM+Q   DLLMG+PS  +++QLREL +R+    K
Sbjct: 535 APGVDRIVMLLAEEENLREVTLFPMNQRAEDLLMGAPSDATMKQLRELHIRLNLPEK 591


>gi|308174456|ref|YP_003921161.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607320|emb|CBI43691.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554375|gb|AEB24867.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328912780|gb|AEB64376.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 592

 Score =  640 bits (1650), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/596 (39%), Positives = 347/596 (58%), Gaps = 10/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+ CG++    +G  V+L GWV + R  GG+IF+D+RD  GI QVV NPD        A
Sbjct: 4   RTYYCGEITEKAIGETVKLKGWVQKRRDLGGLIFIDLRDRSGIVQVVFNPDVSKEALAAA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           +++R+E+VL I+G V +R   T+N N+ TG+IE+ A+ + +LS A+  P P+  +  +  
Sbjct: 64  EAIRNEYVLDIEGTVSAREEGTVNPNLKTGKIEIKAEAVTVLSTAKTPPFPISDQAADVS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R K+R+LDLRR  + + +  R ++  S+R  +    F++  TPILT SSPEGARD+L
Sbjct: 124 EDVRLKHRYLDLRRPAMFQTLQMRHQVTKSIRHFLDENGFLDIETPILTKSSPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGF+RY+Q+A CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQIFKQLLMVSGFERYYQVARCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI+   E ++  V  E      VS    R+ Y++A+  YG+DKPD R  +++ +
Sbjct: 243 SFMSQEDIMALAEKMMAKVMLETKGVE-VSLPLPRMTYEEAMNSYGSDKPDTRFGMLLTD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V++    +EF+VFS  ++     +   +    G  +R   D +  +A + G  GLA++  
Sbjct: 302 VSDIVKDTEFKVFSSAVANGGVVKAINVKGAAGDYSRKDIDALGVFAGNYGAKGLAWVKV 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK  +      +   LD  +GD   F A             R  + 
Sbjct: 362 EAD-----GVKGPIAKFFDNEKQAKLAEALDASEGDLLLFGADKFEVVAQSLGALRLKLG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +E G+I+ + F F W++D+P  E +EEE +   AH+PFTMP      L       +KA  
Sbjct: 417 KERGLIDESLFNFLWVVDWPLLEHDEEEGRFYAAHHPFTMPVREDLDLIETAPEDMKAQA 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+  G IR    +V  + F  +G +KE  E  FG L  AF+ G PPHGGIA 
Sbjct: 477 YDLVLNGYELGGGSIRIFEKDVQEKMFGLLGFTKEEAEEEFGYLLEAFEYGAPPHGGIAL 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VMLL G  N+R+   FP + +   LL  +P  VS  QL EL L +    K+
Sbjct: 537 GLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPGEVSDAQLEELHLSVKRKVKQ 592


>gi|313894864|ref|ZP_07828424.1| aspartate--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312976545|gb|EFR42000.1| aspartate--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 602

 Score =  640 bits (1650), Expect = 0.0,   Method: Composition-based stats.
 Identities = 233/597 (39%), Positives = 350/597 (58%), Gaps = 11/597 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
            RTH CG L    VG  V L GWV R R HGG+IF+D+RD  G+ Q+V +        F 
Sbjct: 8   KRTHGCGTLRKEHVGGEVSLCGWVSRRRDHGGLIFVDMRDRSGLVQIVFDEAVMAGGTFH 67

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+++RSE+V+ + G V +RSA+T+N N+ TG++E+   ++ IL+ A+  P  +    + 
Sbjct: 68  DAEALRSEFVIAVRGNVRARSADTVNPNMETGEVEIVVSELRILNKAKTPPFYIQDGIDV 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR +YR+LDLRR  +  NI+ R R+   MR       F+E  TP+L  S+PEGARDF
Sbjct: 128 DEMIRLRYRYLDLRRPEMQANIMLRHRVAKIMRDFFDRSGFLEIETPMLCKSTPEGARDF 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQ+PQ +KQLLM SGF++YFQI  CFRDED R+DR P EF QLD+E
Sbjct: 188 LVPSRLNAGEFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQP-EFTQLDIE 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF++Q+ IL+ ME +++ VFE+      +     R+ +D+A+ R+G+DKPDLR  + + 
Sbjct: 247 MSFMDQESILSLMEELVKEVFEKTLGA-HIETPLPRMSWDEAMERFGSDKPDLRFGMELR 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++TE+   SEF+VF+ ++      +V  +        R   D +  + ++ G  GLA+I 
Sbjct: 306 DITEYVGGSEFKVFNAVMEAGGRVKVINVEGY-ANIPRRELDGLVTYVQNYGAKGLAWIQ 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +            P  K       E I+  +  + GD    +A  P        + R  +
Sbjct: 365 YT-----EEGVKSPFKKFYADETFETIKNAVGAKTGDLLLVVADQPAVVAQALGELRLEM 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +  G+I+ +   F W++DFP +E++ EEK+    H+PFT P+     +   D   +KA 
Sbjct: 420 GRRRGLIDPDALSFLWVVDFPMFEYSAEEKRYKAMHHPFTAPRDEDIPMLATDPGKVKAN 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R + S++  Q F  +G+S E    +FG +  AF+ G PPHGG+A
Sbjct: 480 AYDMVLNGVEIGGGSLRIYRSDLQEQVFETLGLSPEEAREKFGFMMNAFEYGTPPHGGLA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QLREL +R     KK
Sbjct: 540 FGLDRLVMLMAKRRSIRDVIPFPKTQSASDVMCQAPSPVDEKQLRELYIRTAVPKKK 596


>gi|296137210|ref|YP_003644452.1| aspartyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295797332|gb|ADG32122.1| aspartyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 599

 Score =  640 bits (1650), Expect = 0.0,   Method: Composition-based stats.
 Identities = 229/601 (38%), Positives = 345/601 (57%), Gaps = 11/601 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           R+  CG +  + +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RSQYCGQVTEAQLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAAMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + GLV  R A T N  + +G+IE+    I +L+ +   P  +  +    E+
Sbjct: 64  GLRNEFCVQVQGLVRPRPAGTENEGMTSGKIEVLCHDITVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+  ++R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLKLRYRVAMAVRRFLDGQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQ+LM +GFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGEFFALPQSPQLFKQMLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++RGVF++  N   ++N +  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LSEQEIRDLFETMIRGVFKDVLNIE-LANPYPVMTYAEAMARFGSDKPDLRVKMEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G  V      GG  +R+  D   E+ +  G  GLA+I    
Sbjct: 301 DVMADVDFKVFSGPATTPGGRVVALRVPGGGEMSRSEIDAYTEFVKIYGAKGLAWIKVND 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+L+     A+  R   Q+GD  FF A             R  I   
Sbjct: 361 VSKGRDGLQSPIVKNLHDAAIAAVLQRSGAQNGDLLFFGADKSKIVADAIGGLRVKIGHS 420

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +  G+ + N ++  W++DFP +E++E+ ++    H+PFT P+ G E L         
Sbjct: 421 EFGKSHGLFD-NVWKPLWVVDFPMFEFDEDNQRWAAVHHPFTAPKDGHEELMDTAPEKCI 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R H +EV  + FS + I  +    +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHRAEVQSKVFSALKIGPDEARAKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           IA G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QL+EL +R+  NP+ +
Sbjct: 540 IAFGLDRIVTMMTGAQSIRDVIAFPKTQRAQCLLTNAPSPVDEKQLKELHIRLR-NPQPV 598

Query: 599 L 599
            
Sbjct: 599 A 599


>gi|332701713|ref|ZP_08421801.1| aspartyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332551862|gb|EGJ48906.1| aspartyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 609

 Score =  640 bits (1650), Expect = 0.0,   Method: Composition-based stats.
 Identities = 235/599 (39%), Positives = 346/599 (57%), Gaps = 14/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG L  +DVG+ V L GWV   R HGG+IF+D+RD  G+TQVV +P         A
Sbjct: 23  RTHDCGALRATDVGAKVCLMGWVQFRRDHGGLIFIDLRDRAGLTQVVFDPQAAPTAHSRA 82

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+V+ I G V  R     N  + TG IE+    I++L+ A+  P  +    E  E
Sbjct: 83  HVLRSEYVVAIMGTVRERPEGMHNPKMGTGDIEILVSDIKLLNTAQTPPFEIEDRSEPTE 142

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++ KYR+LDLRR  + +N++ R +   ++R  +    F+E  TP+LT S+PEGARDFLV
Sbjct: 143 QLKLKYRYLDLRRPKMARNMILRHKTAQAVRTYLDRHGFLEIETPVLTKSTPEGARDFLV 202

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+NQG F+ALPQ+PQ +KQLLM +G +RY+QI  CFRDED R+DR P EF Q+DME++
Sbjct: 203 PSRLNQGEFFALPQSPQLFKQLLMVAGLERYYQIVRCFRDEDLRADRQP-EFTQIDMELT 261

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++  +++  E ++  VF++  +   + + F R+ + +A+R YG DKPD+R  + +  V
Sbjct: 262 FVDEAQVMDIAEGMIHTVFKQVLDVE-LPSPFPRMSHFEAMRDYGVDKPDIRFGLKLFEV 320

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+ F  S F+VF+    V            G   +R   D   E+ +  G  GLA+I  +
Sbjct: 321 TDIFKGSNFKVFASSELVK-----AVRVPGGESLSRKEIDDFTEFVKIYGSQGLAWIKIK 375

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            DE        P+ K  +     A+  RL +  GD  FF AG          + R  + +
Sbjct: 376 GDE-----WQSPIVKFFSPEEKSALAERLGIVSGDIVFFQAGPKAVVNPAIGNLRLKLGE 430

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            +G+I    F   W+ DFP  E++ +EK+    H+PFT PQ     L  +D   + +  Y
Sbjct: 431 RMGLIPAGTFAPLWVTDFPLLEYDADEKRWAAMHHPFTQPQLETLPLMDSDPGKVLSRAY 490

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+EI  G IR H  E+  + F  +GI  E  E +FG + +A + G PPHGGIA G
Sbjct: 491 DIVLNGYEIGGGSIRIHTREMQARMFQALGIGAEEAEAKFGFMLQAMEHGAPPHGGIAFG 550

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKI 601
           +DRI+ML+ GA ++R+V  FP +Q    ++ G+PSTV+ +QLRELG+++ E  K   K 
Sbjct: 551 LDRIIMLMTGAPSIRDVIAFPKTQKATCMMTGAPSTVAGKQLRELGIKLREAAKPEEKA 609


>gi|301384823|ref|ZP_07233241.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302063523|ref|ZP_07255064.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302130613|ref|ZP_07256603.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
          Length = 591

 Score =  640 bits (1650), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 345/593 (58%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDVEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G              R+  D   ++    G  GLAYI    
Sbjct: 300 DQLNAVEFKVFSGPANDPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +   N   I  R+   DGD  FF A             R  I  +
Sbjct: 360 RAKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGADKFKVVSEALGALRIKIGND 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +  C  +   W++DFP +E N++       H+PFT P+   E L+ N   +  +  YD
Sbjct: 420 LKLHTCE-WAPMWVVDFPMFEENDD-GSFSALHHPFTAPKCTPEELEAN-PATALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 537 DRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|123442639|ref|YP_001006616.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166225443|sp|A1JRL1|SYD_YERE8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|122089600|emb|CAL12449.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 598

 Score =  640 bits (1650), Expect = 0.0,   Method: Composition-based stats.
 Identities = 222/592 (37%), Positives = 332/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGVD--LGDFPVMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   ++    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDAKGRVAALRVPGGAQVTRKQIDEYGQFVGIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    EAI  R   + GD  FF A             R  + ++
Sbjct: 357 RAAGVEGVQSPIAKFLSAEVLEAILARTQAESGDILFFGADSFKVVTDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   + +   W++DFP +E ++ E  +   H+PFT P+            +  A  YD
Sbjct: 417 LALTKLDSWAPLWVVDFPMFE-DDSEGGLSAMHHPFTAPKDMSPEQLAAAPTTAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+  Q F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRTEMQQQVFGILGINEEEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V   
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVVAKK 587


>gi|320323055|gb|EFW79144.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320329673|gb|EFW85662.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330877982|gb|EGH12131.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 591

 Score =  640 bits (1650), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 345/593 (58%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGTIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G              R+  D   ++    G  GLAYI    
Sbjct: 300 DQLTGVEFKVFSGPANDPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +   N   I  R+   DGD  FF A             R  I  +
Sbjct: 360 RAKGPEGLQSPIVKFIPEDNLNVILDRVGAVDGDIVFFGADKFKIVSEALGALRIKIGND 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +  C  +   W++DFP +E N++       H+PFT P+   E L+ N   +  +  YD
Sbjct: 420 LKLHTCE-WAPMWVVDFPMFEENDD-GSFTALHHPFTAPKCTPEELEAN-PATALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 537 DRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|219849931|ref|YP_002464364.1| aspartyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|254781723|sp|B8G6W9|SYD_CHLAD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219544190|gb|ACL25928.1| aspartyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 588

 Score =  640 bits (1650), Expect = 0.0,   Method: Composition-based stats.
 Identities = 257/593 (43%), Positives = 366/593 (61%), Gaps = 6/593 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEI 61
            YR+H+CG+L  +  G  V L+GWVHR R HG +IF+D+RD YGITQVV N  ++A   +
Sbjct: 1   MYRSHTCGELRPAHAGQEVTLAGWVHRRRDHGDLIFIDLRDRYGITQVVFNSANAAAHAV 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A++VRSE+VL + G V  R AE +N +I TG+IE+ A + ++L+ A   P+ +  E    
Sbjct: 61  AETVRSEYVLQVRGKVRIRPAEAVNPDIATGEIEVDAFEAQVLNPARTPPIYIAKEAGED 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           ES+R KYR+LDLRR+ + +N++ R R++  +R  + AE FIE  TPIL  S+PEGARD+L
Sbjct: 121 ESVRLKYRYLDLRRERMQRNLILRHRVVKFIRDFLDAEGFIEIETPILIKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ G FYALPQ+PQQ KQLLM +G+D+YFQIA CFRDED R+DR P EF QLDMEM
Sbjct: 181 VPSRLHPGKFYALPQSPQQLKQLLMVAGYDKYFQIARCFRDEDQRADRQP-EFTQLDMEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++N +E +   +    +    +   F R+ Y +A+ RYG+DKPDLR  + + N
Sbjct: 240 SFVDQEDVINLIERLFTELCRTVTPHKRLLTPFRRLTYAEAMERYGSDKPDLRYDLELVN 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    + F+VF  +L+V    +   +P  G   +R   D + E ARS G  GLA+   
Sbjct: 300 LSDVLAETPFQVFRSVLAVGGQVKGIRVPGCG-HFSRKQIDELTEVARSGGAKGLAWAVV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D           AK+L     +A+  R+  Q GD    +A  P+   +     R  +A
Sbjct: 359 PTDGG---DVRSSFAKNLAPGEFDALAQRMGAQPGDLLLIVADRPVVVAASLDKLRRKLA 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             L + + +   F W++DFP  EWNEEE++ D  H+PFT P+     L   D   ++A  
Sbjct: 416 DLLQLADPDTLCFAWVVDFPLVEWNEEEQRWDAVHHPFTSPKDEDLHLLATDPGKVRAKA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDL+ NG+E   G IR H  +V  Q FS +GI +E  + +FG +  AF+ G PPHGGIA 
Sbjct: 476 YDLILNGYEAGGGSIRIHRRDVQQQVFSLLGIGEEKAQAQFGHMLEAFEYGAPPHGGIAP 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           GIDR+VM+L     +REV  FP +Q   DL+  +PS V   QL+EL +RIVE+
Sbjct: 536 GIDRLVMILADEPTIREVMAFPKTQQAVDLMTNAPSPVDERQLKELHIRIVED 588


>gi|161613543|ref|YP_001587508.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|167552463|ref|ZP_02346216.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168238531|ref|ZP_02663589.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168259824|ref|ZP_02681797.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|194442789|ref|YP_002041166.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194735477|ref|YP_002114936.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|238912039|ref|ZP_04655876.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|189082139|sp|A9MUB9|SYD_SALPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238689770|sp|B4TYS4|SYD_SALSV RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238693528|sp|B4SVF1|SYD_SALNS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|161362907|gb|ABX66675.1| hypothetical protein SPAB_01263 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401452|gb|ACF61674.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194710979|gb|ACF90200.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197288631|gb|EDY28006.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|205322921|gb|EDZ10760.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205351266|gb|EDZ37897.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|322616901|gb|EFY13809.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322618139|gb|EFY15031.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625810|gb|EFY22629.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626262|gb|EFY23072.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632676|gb|EFY29421.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322639020|gb|EFY35713.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322640460|gb|EFY37113.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322644225|gb|EFY40770.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649547|gb|EFY45979.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655455|gb|EFY51763.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660234|gb|EFY56472.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322662915|gb|EFY59122.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322668100|gb|EFY64259.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674140|gb|EFY70234.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675506|gb|EFY71580.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322683080|gb|EFY79096.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686774|gb|EFY82752.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195335|gb|EFZ80515.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323199227|gb|EFZ84322.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204048|gb|EFZ89063.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207483|gb|EFZ92431.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323217467|gb|EGA02186.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323221958|gb|EGA06348.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323224432|gb|EGA08720.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231489|gb|EGA15602.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235931|gb|EGA20010.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240501|gb|EGA24544.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245393|gb|EGA29393.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323247813|gb|EGA31751.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323253612|gb|EGA37440.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323255041|gb|EGA38829.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323260274|gb|EGA43895.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266865|gb|EGA50351.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269071|gb|EGA52527.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 590

 Score =  640 bits (1650), Expect = 0.0,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 331/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADS--LPLDANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L     EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  YD
Sbjct: 417 LSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKKAE 588


>gi|288555366|ref|YP_003427301.1| aspartyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288546526|gb|ADC50409.1| aspartyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 595

 Score =  640 bits (1650), Expect = 0.0,   Method: Composition-based stats.
 Identities = 230/599 (38%), Positives = 350/599 (58%), Gaps = 9/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L    VG  V+L GWV + R  G +IFLD+RD  GI QVV +P+      E A
Sbjct: 4   RTHHCGELRSEHVGETVQLKGWVQKRRDLGNVIFLDLRDRSGIVQVVFSPEVNKEALETA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+VL ++G V++R A T+N  I TG IE+   K+E+L+ ++ LP  +  + +  E
Sbjct: 64  ERVRNEYVLEVEGTVVARDARTVNDKIETGTIEIHVTKVEVLNASKSLPFQIEADTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLRR  + +    R +    +R  +  E F+E  TP+LT S+PEGARD+LV
Sbjct: 124 DVRLRYRYLDLRRPDMQETFKLRHKTTKLIRNFLDEEAFLEIETPMLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SGF+RY+Q+  CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHHGEFYALPQSPQIFKQLLMVSGFERYYQVVRCFRDEDLRADRQP-EFTQIDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++D+L+  E ++  V +E      VS    R+ YD+A+ RYG+DKPD R  + +  +
Sbjct: 243 FMDKEDLLSMTEKMMAKVLKETKGVE-VSLPMPRLTYDEAMNRYGSDKPDTRFEMELIEL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++    S F+VF+  ++     +   +       +R   D + E+ +  G  GLA++   
Sbjct: 302 SDVVRDSSFKVFTSAINGGGIVKGLNLKGGASKMSRKEIDALTEFVKPYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     + E +   ++ ++GD  FF A             R    +
Sbjct: 362 AD-----GLKGPIAKFFEGEHAENLLSAMNGEEGDLLFFAADKAQVVFDSLGALRLKFGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E  +I+ + F F W++DFP  E++E+ K+    H+PFT P+     L   D  S++A  Y
Sbjct: 417 EFDLIDKDAFNFLWVVDFPLVEYDEDAKRYVALHHPFTSPKKADRDLLATDPASVRAEAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G  R +  E+    F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSQRIYEREIQEHMFRALGFSEEEAKEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKI 601
           +DR++MLL G  N+R+   FP + +   LL  +PS VS++QL +L L I+ N    +++
Sbjct: 537 LDRLIMLLAGRTNLRDTIAFPKTASASCLLTNAPSEVSLDQLIDLNLSIIGNKTDKVEV 595


>gi|253989953|ref|YP_003041309.1| aspartyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211639066|emb|CAR67679.1| aspartyl-trna synthetase (ec 6.1.1.12) (aspartate--trna ligase
           (asprs) [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253781403|emb|CAQ84566.1| aspartyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 590

 Score =  639 bits (1649), Expect = 0.0,   Method: Composition-based stats.
 Identities = 219/593 (36%), Positives = 341/593 (57%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L ++  G  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    F +A 
Sbjct: 2   RTDYCGQLNLTHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQQAAFSLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG+IE+ A+ + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMATGEIEVFAESLNIINRSEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR++DLRR  +   +  R +I + +R  M +++F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYIDLRRPEMANRLKTRAKITSFVRRFMDSQDFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++R ++ E    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREIMEKMIRELWLEIKGVD--LGHFPVMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF VF++  + + G         G   +R   D   ++    G  GLA+I    
Sbjct: 297 DLVKNVEFSVFAEPANDSKGRVAVIRVPSGTELSRKQIDEYGKFVGIYGAKGLAWIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    + +  R   QDGD  FF AG            R  + ++
Sbjct: 357 RAAGLEGVQSPIAKFLNAEVIDGLLSRTGAQDGDILFFGAGSTKVVTDALGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   + ++  W++DFP +E + EE  +   H+PFT P+         + +S  A  YD
Sbjct: 417 LNLTKLDSWQPLWVIDFPMFE-DNEEGGLSAMHHPFTSPRNMSAEELVQEPVSAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F+ +GI+++  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRNEMQQAVFNILGINEQEQQEKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V   +
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSYANTAALEELSISVVAKKE 588


>gi|303326111|ref|ZP_07356554.1| aspartate--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302864027|gb|EFL86958.1| aspartate--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 619

 Score =  639 bits (1649), Expect = 0.0,   Method: Composition-based stats.
 Identities = 242/604 (40%), Positives = 358/604 (59%), Gaps = 14/604 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H+CG L ++D  + V L GWV   R HGG+IF+D+RD  G+TQVV +PD   +  E A
Sbjct: 24  RSHNCGQLTLADDQAEVCLMGWVQYRRDHGGLIFVDLRDRDGLTQVVFSPDIAPSAHENA 83

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+VL + G V  R    +N+ ++TG+IE+ A + ++L+ +   P P+    +  E
Sbjct: 84  HILRSEYVLAVKGKVRPRPVGMVNSTMVTGEIEVVAYEWKLLNTSRTPPFPIEDRCDAGE 143

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R  +R+LDLRR  +  N+  R ++  ++R  +    F+E  TP+LT S+PEGARDFLV
Sbjct: 144 NLRLAWRYLDLRRPRMQANLRLRHKVAQTIRRYLDEGGFVEVETPVLTKSTPEGARDFLV 203

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQ+LM SG DRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 204 PSRLNPGEFYALPQSPQLFKQMLMVSGLDRYFQIVRCFRDEDLRADRQP-EFTQVDIEMS 262

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ ++   E ++  VF++      +S  F R+ +D+A+ RYG DKPD R  + + ++
Sbjct: 263 FVDEEKVMTMAEGLMARVFKDVMGKE-LSLPFPRMRWDEAMSRYGVDKPDTRFGLELKDI 321

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T     S F++F++   V            G    R   D   E+ +  G  GLA+I  +
Sbjct: 322 TGIVRGSGFKLFAQAKLVK-----AMKVPGGESMTRKEIDAFTEFVKIYGAQGLAWIKIK 376

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E        P+AK L+    + I   LD+Q GD  FF AG+P    +   + R H+A 
Sbjct: 377 AGE-----WQSPIAKFLSDEERKGIAEALDLQVGDIVFFQAGEPDMVNAALGNLRVHLAG 431

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I  + F F W+ DFP YE+++EEK+    H+PFT P  G   L  +D    +A  Y
Sbjct: 432 HLKLIPEDSFNFLWVTDFPLYEYDQEEKRYVACHHPFTSPAPGHLELMTSDPAKARARAY 491

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  +V  + F  +G + E  E +FG L +A + G PPHGG+A G
Sbjct: 492 DMVLNGNEVGGGSIRIHSGDVQRKMFEALGFTPEQAETQFGFLIQALEQGAPPHGGLAFG 551

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           +DR++MLL GA ++R+V  FP +Q    LL  +P+ V+ +QLRELGLR+ E P K  +  
Sbjct: 552 LDRLIMLLAGAASIRDVIAFPKTQKATCLLTEAPAPVAGKQLRELGLRLREQPAKEGEAK 611

Query: 603 VTTI 606
            +  
Sbjct: 612 KSEE 615


>gi|170740696|ref|YP_001769351.1| aspartyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|238687997|sp|B0UI66|SYD_METS4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|168194970|gb|ACA16917.1| aspartyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 604

 Score =  639 bits (1649), Expect = 0.0,   Method: Composition-based stats.
 Identities = 335/598 (56%), Positives = 421/598 (70%), Gaps = 8/598 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  SDVG+ VRLSGW HRVR HGG++F+D+RDHYG+TQ V + DSA F 
Sbjct: 1   MHRYRTHTCGALRPSDVGATVRLSGWCHRVRDHGGVLFIDLRDHYGVTQCVVDADSAAFR 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A++VRSEWV+ +DG V  R   T NA++ TG +EL    +E+L  A ELP+PVFGE +Y
Sbjct: 61  AAEAVRSEWVIRVDGRVRRRPEGTENADLPTGAVELYITDLEVLGQAVELPMPVFGELDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YRFLDLRR+ LH NI+KR  II+S+R RM    F E  TPILTASSPEGARDF
Sbjct: 121 PEETRLRYRFLDLRREKLHANIMKRGAIIDSLRRRMREGGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   +E VLRGVFEEF+ G  V+  F RI Y +A+ +YG DKPDLRNP+I+ 
Sbjct: 241 MSFVTQEDVFQAVEPVLRGVFEEFAEGWRVTGTFPRIPYAEAMLKYGVDKPDLRNPLIIV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           +VT+ F        +    +  G  V AIPA G G   R+F DR+N WAR +G PGL YI
Sbjct: 301 DVTQEFSAEAVTFNAFKSVIRAGGVVRAIPAPGAGAQPRSFFDRLNNWARGEGAPGLGYI 360

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  +E G ++G GP+AK +      AI  +  ++ GD+ FF AG   K    A  AR  
Sbjct: 361 VF-EEEGGVLSGRGPIAKFVPPEVQAAIAAKAGLKAGDAVFFAAGVEAKAAGLAGKARIR 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL----- 474
           I  +LG+ + + F FCWI DFP YEWNE+EK+IDF+HNPF+MP    +   G D      
Sbjct: 420 IGDDLGLTDKDQFAFCWITDFPMYEWNEDEKRIDFSHNPFSMPNYDHDGFLGLDPADAET 479

Query: 475 -LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
            L IKAFQYD+VCNG E++SG IRNH  +VM +AF+  G  +EV+E +FGG+  A + G 
Sbjct: 480 ILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGREVLEQKFGGMLNALRMGA 539

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGGIA G+DRIVMLL    N+REV LFPM+Q   DL+MG+PS V+ +QLREL +R+
Sbjct: 540 PPHGGIAPGVDRIVMLLCHEPNIREVVLFPMNQRAEDLMMGAPSEVTPKQLRELHIRL 597


>gi|238788524|ref|ZP_04632317.1| Aspartyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238723437|gb|EEQ15084.1| Aspartyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 597

 Score =  639 bits (1649), Expect = 0.0,   Method: Composition-based stats.
 Identities = 227/603 (37%), Positives = 334/603 (55%), Gaps = 9/603 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFAHTLNIINRSEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E         +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGV--SLGDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   ++    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDAKGRVAALRVPGGAQVTRKQIDEYTQFVSIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L+    EAI VR   + GD  FF A             R  + ++
Sbjct: 357 RAAGIEGVQSPVAKFLSADVLEAILVRTQAESGDILFFGADSDKVVTDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     +   W++DFP +E ++ E  +   H+PFT P+            +  A  YD
Sbjct: 417 LQLTQLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKDMSPEQLAAAPTTAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+  Q F  +GI++     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISV 603
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V   KK    SV
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVV--AKKGATDSV 593

Query: 604 TTI 606
              
Sbjct: 594 EEE 596


>gi|312898874|ref|ZP_07758262.1| aspartyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620036|gb|EFQ03608.1| aspartyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 599

 Score =  639 bits (1649), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/592 (40%), Positives = 346/592 (58%), Gaps = 10/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H C  +   D G  V L GWV R R HGG+IF+D+RD  GI QVVA+PD     F+ A
Sbjct: 12  RSHYCAAVTEEDQGKEVVLCGWVERRRDHGGLIFIDLRDRTGIIQVVASPDYEKESFDKA 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+VL + G+V  R   TIN  + TG+IE+  +++ IL+ ++  P  +    +  E
Sbjct: 72  EQVRTEYVLVVRGIVRMRDEATINEKMKTGKIEIRCEELRILNTSKTPPFYIEDNIDVDE 131

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR +YR+LDLRR  +  N++ R ++ ++MR  +    FI+  TP L  S+PEGARD+LV
Sbjct: 132 KIRLQYRYLDLRRPEMQNNLIMRNKVKHAMRDFLNQHGFIDIETPELCKSTPEGARDYLV 191

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN+G FYALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLDMEMS
Sbjct: 192 PSRVNEGKFYALPQSPQIFKQLLMISGMDRYYQIARCFRDEDLRADRQP-EFTQLDMEMS 250

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q+DIL   E ++  VF++            R+ +D A+  YG+DKPDLR  +   ++
Sbjct: 251 FMSQEDILQLTEEMIGYVFKQALGYEI-PGPIQRMTWDYAMENYGSDKPDLRFDMKFKDI 309

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE    +EF+VF  ++      +   +    G   R   D + E+  + G  GLA+I + 
Sbjct: 310 TELVKDTEFKVFRNVVDAGGQVKAINVKGYAG-IPRRELDGLVEYVSTYGAKGLAWIAF- 367

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                       V K L     +AI      + GD    IA  P    +   + R  +A+
Sbjct: 368 ----AEEGMKSQVKKFLGEDTLKAIGEACGSETGDLVLMIADKPSVVAAALGELRKEMAR 423

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
             GII+ N F F W++DFP +E++EEEK+    H+PFT P+         D   + A  Y
Sbjct: 424 RTGIIDENAFAFTWVVDFPMFEYDEEEKRYTAMHHPFTAPRDEDLDKLETDQSKVYAKAY 483

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+  G +R +  ++  + F  +G++ E  + +FG L RAF+ G PPHGG+A G
Sbjct: 484 DLVLNGVELGGGSLRIYQPDIQQRVFKAIGLTDEEAKQKFGFLLRAFEYGAPPHGGLAFG 543

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR++ML+L  K++R+V  FP +QN  D +  +PS V+  QLREL + + ++
Sbjct: 544 LDRMIMLMLKRKSIRDVIAFPKTQNAIDPMSEAPSEVAPRQLRELHIEVAQD 595


>gi|330872656|gb|EGH06805.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 591

 Score =  639 bits (1649), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 345/593 (58%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G              R+  D   ++    G  GLAYI    
Sbjct: 300 DQLNAVEFKVFSGPANDPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +   N   I  R+   DGD  FF A             R  I  +
Sbjct: 360 RAKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGADKFKVVSEALGALRIKIGND 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +  C  +   W++DFP +E N++       H+PFT P+   E L+ N   +  +  YD
Sbjct: 420 LKLHTCE-WAPMWVVDFPMFEENDD-GSFSALHHPFTAPKCTPEELEAN-PATALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 537 DRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|66044654|ref|YP_234495.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|257487013|ref|ZP_05641054.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289626493|ref|ZP_06459447.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|298488212|ref|ZP_07006248.1| Aspartyl-tRNA synthetase; Aspartyl-tRNA(Asn) synthetase
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|302187160|ref|ZP_07263833.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
 gi|81308434|sp|Q4ZWL5|SYD_PSEU2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|63255361|gb|AAY36457.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Pseudomonas
           syringae pv. syringae B728a]
 gi|298157270|gb|EFH98354.1| Aspartyl-tRNA synthetase; Aspartyl-tRNA(Asn) synthetase
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|330868609|gb|EGH03318.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330950612|gb|EGH50872.1| aspartyl-tRNA synthetase [Pseudomonas syringae Cit 7]
 gi|330968894|gb|EGH68960.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
 gi|330988966|gb|EGH87069.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331009344|gb|EGH89400.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 591

 Score =  639 bits (1649), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 345/593 (58%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G              R+  D   ++    G  GLAYI    
Sbjct: 300 DQLTGVEFKVFSGPANDPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +   N   I  R+   DGD  FF A             R  I  +
Sbjct: 360 RAKGPEGLQSPIVKFIPEDNLNVILDRVGAVDGDIVFFGADKFKIVSEALGALRIKIGND 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +  C  +   W++DFP +E N++       H+PFT P+   E L+ N   +  +  YD
Sbjct: 420 LKLHTCE-WAPMWVVDFPMFEENDD-GSFTALHHPFTAPKCTPEELEAN-PATALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 537 DRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|78222569|ref|YP_384316.1| aspartyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|97196683|sp|Q39VY3|SYD_GEOMG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78193824|gb|ABB31591.1| aspartyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 594

 Score =  639 bits (1649), Expect = 0.0,   Method: Composition-based stats.
 Identities = 239/593 (40%), Positives = 349/593 (58%), Gaps = 10/593 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            R+H CG+L  +DVG  V L GW+ R R HGG+IF D+RD  G+ Q+V +P  ++     
Sbjct: 9   KRSHYCGNLTKADVGREVILMGWILRRRDHGGLIFADLRDREGLAQIVFDPAKNTDAHHK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++R+E+V+ + G V+ R   T+N+ + TG++E+   + +IL+ ++ LP  +    +  
Sbjct: 69  AEAIRNEYVVAVKGEVIPRPEGTVNSAMKTGEVEVLVTECKILNRSKALPFTLDDYVDVA 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  L +N++ R+ +    R  +    F+E  TP LT S+PEGARDFL
Sbjct: 129 ENIRLKYRYLDLRRPVLQQNLILRSMVAQITRQYLSENGFLEIETPFLTKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+NQG+FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 189 VPSRINQGNFYALPQSPQIFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQIDCEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++++DI++ ME ++  +F   + G  V     R+ Y +AIRR+G D PD+R  + +  
Sbjct: 248 SFIDREDIISVMEGLIAKIF-TVAKGVDVPLPMPRMTYAEAIRRFGVDNPDVRFGLELVE 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+    + F+VF+ + +     +           +R   D + E+A+  G  GLAY+  
Sbjct: 307 LTDIVKGAGFKVFADVAASGGIIKGLNAK-GCARFSRKEIDDLTEFAKIYGAKGLAYVKI 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E G      P+AK  +      +      +DGD   F+A  P          RNH+A
Sbjct: 366 ---EEGQ--WHSPIAKFFSAEEIATMNQAFGAEDGDLLLFVADKPKVVNDSLGKLRNHLA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             LG+ + N F F WI DFP  EW+E+EK+    H+PFT P         +D  S +A  
Sbjct: 421 GILGLADKNTFRFVWITDFPLLEWDEDEKRWAAVHHPFTAPMDEDLEKVESDPGSCRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H   V    FS +G+S +    +FG L  A +CG PPHGGIA 
Sbjct: 481 YDLVLNGNEIGGGSIRIHQQHVQSLMFSMLGLSDDETRAKFGFLLDALECGTPPHGGIAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR++MLL G+ ++R+V  FP +Q    L+  +PS V  +QLREL L++   
Sbjct: 541 GMDRLIMLLTGSDSIRDVIAFPKTQKGACLMSEAPSPVDAKQLRELALKVTVK 593


>gi|303229389|ref|ZP_07316179.1| aspartate--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515925|gb|EFL57877.1| aspartate--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 600

 Score =  639 bits (1649), Expect = 0.0,   Method: Composition-based stats.
 Identities = 232/596 (38%), Positives = 356/596 (59%), Gaps = 9/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61
           +RTH CG +  ++VG  V L GWV R R HGG+IFLD+RD  GI QVVA+PD     F  
Sbjct: 8   HRTHGCGTISEAEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGIVQVVASPDHNVESFHK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VLC+ G +  R  E IN N+ TG  E+  +++ +L+ A+  P  +    +  
Sbjct: 68  AEDVRNEYVLCVRGKITKRDEEAINPNLPTGAYEMYCEELRVLNSAKTPPFYIQDNIDVD 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + +N++ R ++  +MR    + +F+E  TP+LT S+PEGARD+L
Sbjct: 128 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 188 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDLEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++DI   +E ++  VF++            RI +D+A+ +YG+DKPDLR  +   +
Sbjct: 247 SFVDEEDIYALLEQMVAEVFKKTLGKEI-PLPMPRITWDEAMDKYGSDKPDLRFDMAFTD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VTE    +EF+VF  ++      +   +P    G  R   D +  +    G  GLA+  +
Sbjct: 306 VTELVKDTEFKVFRSVIDNGGIVKGIVVP-GDAGIPRRELDDLVAYVNRYGAKGLAWACF 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D     +    + K L       I  ++  + GD    IA  P        + R  +A
Sbjct: 365 NEDG----SIKSQIMKFLGEDTIRNIGEKMGAKGGDLVLMIADKPATVARALGELRLEMA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + + +I+ +   F W+ DFP +E+NE+EK+    H+PFTMP+        +D  S+KA  
Sbjct: 421 RRMNMIDEDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHEDLDKLQSDPGSVKAIA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R + S+V  + F  +G+S+E  +++FG +  AF+ G PPH G A 
Sbjct: 481 YDMVLNGVEIGGGSLRIYQSDVQEKVFKAIGLSEEEAKSKFGFMLDAFKYGAPPHAGCAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QL+EL ++     ++
Sbjct: 541 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIKPDVEEEE 596


>gi|304312893|ref|YP_003812491.1| Aspartyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301798626|emb|CBL46858.1| Aspartyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 588

 Score =  639 bits (1648), Expect = 0.0,   Method: Composition-based stats.
 Identities = 231/593 (38%), Positives = 339/593 (57%), Gaps = 10/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  + +   V L GWVHR R HGG+IF D+RD  G+ QVV +PD+   F  A+
Sbjct: 2   RSHYCGHLNSTHIDQQVTLCGWVHRRRDHGGVIFFDLRDREGVAQVVFDPDTVEAFATAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL I G V +R   T+NA + TG+IE+  + IEIL+ +E  P  +       E 
Sbjct: 62  RVRSEYVLKITGRVRARPEGTVNATMATGEIEVLGKSIEILNTSETPPFQLDEYGNVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR+LDLRR  +   ++ R ++ ++MR  +    FI+  TPILT ++PEGARD+LVP
Sbjct: 122 VRLRYRYLDLRRPEMQAKLLFRAKVTSTMRRYLDEHGFIDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR   GSF+ALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYPGSFFALPQSPQLFKQLLMVAGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + QD+I+  +E + R +F+E            R+ + +A+ R+G+DKPDLR P+ +  ++
Sbjct: 241 LTQDEIMGIVEGMFRNLFKEVLGVEIPPL--RRMPFSEAMARFGSDKPDLRIPLELVEIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361
           +     E R+F+   + +P   + A+   GG    +R   D   ++    G  GLAYI  
Sbjct: 299 DLMTSVESRIFAGP-ANDPKCRIAALRLPGGAARLSRKDIDNYTQFVGIYGAKGLAYIKV 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+ K L     E I  R+   DGD  FF A             R  + 
Sbjct: 358 NDLTQGREGLQSPILKFLPDDVVEGIMKRVHAADGDLVFFGADKAKIVSDALGALRVKLG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG++    +E  W++DFP +E   +       H+PFT P    ES+  N   +  +  
Sbjct: 418 HDLGLVQ-GEWEALWVVDFPMFE-ETDTGGWTALHHPFTSPSCSPESMLEN-PGAALSRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR H  ++    F+ +GIS E  + +FG L  A + G PPHGG+A 
Sbjct: 475 YDLVLNGVELGGGSIRIHQQDMQKAVFNLLGISTEDAQEKFGFLLDALKFGAPPHGGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR+VML+ G+  +R+V  FP +Q    ++  +P+ V  +QLRE+G+R+ E 
Sbjct: 535 GLDRLVMLMTGSPTIRDVIAFPKTQTAACVMTQAPAPVDAKQLREVGIRLREK 587


>gi|168234037|ref|ZP_02659095.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194469841|ref|ZP_03075825.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197249743|ref|YP_002146121.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|238690038|sp|B5F3I9|SYD_SALA4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|194456205|gb|EDX45044.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197213446|gb|ACH50843.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|205331971|gb|EDZ18735.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 590

 Score =  639 bits (1648), Expect = 0.0,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 331/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADS--LPLDANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDEHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L     +AI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLDGINSPVAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  YD
Sbjct: 417 LSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKKAE 588


>gi|289650939|ref|ZP_06482282.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 591

 Score =  639 bits (1648), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 345/593 (58%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G              R+  D   ++    G  GLAYI    
Sbjct: 300 DQLTGVEFKVFSGPANDPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +   N   I  R+   DGD  FF A             R  I  +
Sbjct: 360 RAKGPEGLQSPIVKFIPEDNLNVILDRVGAVDGDIVFFGADKFKIVSEALGALRIKIGND 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +  C  +   W++DFP +E N++       H+PFT P+   E L+ N   +  +  YD
Sbjct: 420 LKLHTCE-WAPMWVVDFPMFEENDD-GSFTALHHPFTAPKCTPEELEAN-PATALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 537 DRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|281358726|ref|ZP_06245203.1| aspartyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281314852|gb|EFA98888.1| aspartyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 599

 Score =  639 bits (1648), Expect = 0.0,   Method: Composition-based stats.
 Identities = 297/605 (49%), Positives = 402/605 (66%), Gaps = 7/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M++YRT++CG+L  ++VG  VRLSGW+H VR HGG+IF+D+RDHYGITQVV +P+ A ++
Sbjct: 1   MNKYRTNTCGELRKANVGETVRLSGWIHSVRDHGGVIFIDLRDHYGITQVVIDPECAFYQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             +  R E V+  DG V++RS  T+N  + TG+IE+ A  +EIL  AE +P  +  +   
Sbjct: 61  ALERWRVETVVRFDGEVIARSESTVNPKLATGEIEIKATDMEILGDAEVIPFLIAKDDGA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE++R KYRFLDLRRD LH+NI+ R+++I  MR  M    F E  TPILTASSPEGARD+
Sbjct: 121 PEAMRLKYRFLDLRRDELHRNIMLRSQVIAEMRRYMTTNGFNEFQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDDI   +E +L  VF +FS        F RI Y +A+RR+G+DKPDLRNP+ M 
Sbjct: 241 MSFVEQDDIFAVIEGLLEDVFGKFSTKEFTHAPFPRIPYREAMRRFGSDKPDLRNPLEMI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E F    F+ F+ +++          P K  G  R F D M ++A+  G  G+AYI 
Sbjct: 301 DVSEQFRDCGFKAFAGVVANGGVVRAIKAP-KVAGKPRKFFDDMIKFAQENGAKGMAYII 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W            P+ K L      A++    ++ GD+ FF+A                +
Sbjct: 360 W-----SEEGEKSPIVKFLTPEILAALKTAGGVETGDALFFLADAEKLVQKIGGAVIPEL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L +I+ N F+FCWI+DFP +E +EE     F+HNPF+MPQGGM++L   + L I A+
Sbjct: 415 GRQLELIDPNVFKFCWIVDFPMFEEDEETGATVFSHNPFSMPQGGMDALLNKNPLDILAY 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  EVM +AF   G  + VV+++FGG+  AF+ G PPHGGIA
Sbjct: 475 QYDIVCNGIELSSGAIRNHQPEVMYKAFEIAGYDRSVVDDKFGGMINAFKLGAPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DR+VMLL    N+REV  FP +Q   DL+M +P+ VS++QLREL + + + PKK  K
Sbjct: 535 PGVDRMVMLLADEPNIREVIAFPFNQQAQDLMMNAPAEVSIKQLRELHIEV-KLPKKQEK 593

Query: 601 ISVTT 605
            +   
Sbjct: 594 PAAEA 598


>gi|318605496|emb|CBY26994.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 598

 Score =  639 bits (1648), Expect = 0.0,   Method: Composition-based stats.
 Identities = 220/592 (37%), Positives = 331/592 (55%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGVD--LGDFPVMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     E +VFS   +   G         G    R   D   ++    G  GLA++    
Sbjct: 297 DLVKDVESKVFSGPANDAKGRVAALRVPGGAQVTRKQIDEYGQFVGIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    +AI  R   + GD  FF A             R  + ++
Sbjct: 357 RAAGVEGVQSPIAKFLSADVLDAILARTQAESGDILFFGADSFKVVTDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   + +   W++DFP +E ++ E  +   H+PFT P+            +  A  YD
Sbjct: 417 LALTKLDSWAPLWVVDFPMFE-DDSEGGLSAMHHPFTAPKDMSPEQLAAAPTTAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+  Q F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRTEMQQQVFGILGINEEEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V   
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVVAKK 587


>gi|224824723|ref|ZP_03697830.1| aspartyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603216|gb|EEG09392.1| aspartyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 600

 Score =  639 bits (1648), Expect = 0.0,   Method: Composition-based stats.
 Identities = 232/600 (38%), Positives = 348/600 (58%), Gaps = 12/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +  + +G  V + GWVHR R HGG+IF+D+RD  G+ QVV +PD+   F+ A 
Sbjct: 2   RTNYCGLIDKAYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGLVQVVIDPDTPEAFKTAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G+V  R A T NA++++G+IE+ A+ IEIL+ A   P  +  E    E+
Sbjct: 62  SARNEFVLSISGIVRERPAGTANAHLVSGEIEILAKDIEILNTAATPPFQIDDENLS-EN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R  +R +DLRR  + KN+  R R+   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTHRVIDLRRPAMQKNLRLRYRVAMGVRQYLDQQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++D I++  E++ R +F +  +      +F R+ Y DA+  YG+DKPDLR  +    +T
Sbjct: 240 LDEDQIMDITEDMARQIFRDVMDVE--LGDFPRMSYADAMHYYGSDKPDLRVSLQFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW-- 361
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADLPNGRVVALRVPGGAALSRKEIDDYTQFVGIYGAKGLAYIKVND 357

Query: 362 --RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++    N     P+ K L++     I  R    +GD  FF A             R  
Sbjct: 358 KSKISNDENSGLQSPIVKFLSVNALNEIMARTAADNGDIIFFGADKAKVVNEAIGALRIK 417

Query: 420 IAQELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           I  E G+        +   W++DFP +E++E++ +    H+PFT P+ G E L  ++  +
Sbjct: 418 IGHERGLAGGYFVKEWRPLWVVDFPMFEYDEDDDRWTACHHPFTSPKPGHEDLMDSNPGA 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G +R H +E+  + F+ + I+ E  +N+FG L    + G PPH
Sbjct: 478 CLARAYDMVLNGWEIGGGSVRIHRAEIQEKVFAALKITPEEQQNKFGFLLDNLKFGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P  V  +QLREL LR+ +  +
Sbjct: 538 GGLAFGLDRLVTLMAGAESIRDVIAFPKTQRAQCLLTNAPGAVDEKQLRELNLRLRQKAE 597


>gi|168241530|ref|ZP_02666462.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168462567|ref|ZP_02696498.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168820725|ref|ZP_02832725.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194448833|ref|YP_002045954.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|198243936|ref|YP_002215184.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204931081|ref|ZP_03221907.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205352393|ref|YP_002226194.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856578|ref|YP_002243229.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|238690368|sp|B5FSN0|SYD_SALDC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238690442|sp|B5R1V2|SYD_SALEP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238690485|sp|B5R8D6|SYD_SALG2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238693638|sp|B4T7Z9|SYD_SALHS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|194407137|gb|ACF67356.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|195633952|gb|EDX52304.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197938452|gb|ACH75785.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204320125|gb|EDZ05330.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205272174|emb|CAR37032.1| Aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205339452|gb|EDZ26216.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205342579|gb|EDZ29343.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|206708381|emb|CAR32685.1| Aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|320085481|emb|CBY95262.1| Aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|326627445|gb|EGE33788.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 590

 Score =  639 bits (1648), Expect = 0.0,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 331/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADS--LPLDANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L     +AI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLDGINSPVAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  YD
Sbjct: 417 LSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKKAE 588


>gi|321312283|ref|YP_004204570.1| aspartyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320018557|gb|ADV93543.1| aspartyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 592

 Score =  639 bits (1647), Expect = 0.0,   Method: Composition-based stats.
 Identities = 231/595 (38%), Positives = 342/595 (57%), Gaps = 10/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+ CGD+    +G  V L GWV + R  GG+IF+D+RD  GI QVV NPD       +A
Sbjct: 4   RTYYCGDITEKAIGESVTLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKEALAVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP 121
           + +R+E+VL + G V++R   T+N N+ TG IE+ A  + +LS A+  P  +  +  E  
Sbjct: 64  EGIRNEYVLDVQGKVVAREEGTVNPNLKTGAIEIHADGVTVLSAAKTPPFAISDQAEEVS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R K+R+LDLRR  + + +  R  +  ++R  +    F++  TPILT S+PEGARD+L
Sbjct: 124 EDVRLKHRYLDLRRPAMFQTMQMRHNVTKAVRSFLDENGFLDIETPILTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMVSGIERYYQIARCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI++  E+++  +  E            R+ YD+A+ +YG+DKPD R  +++ +
Sbjct: 243 SFMSQEDIMSLAEDMMAKIMRETKGVEI-KLPLPRMTYDEAMNKYGSDKPDTRFDMLLTD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V++    +EF+VFS  ++     +   +    G  +R   D +  +A + G  GLA++  
Sbjct: 302 VSDIVKDTEFKVFSSAVANGGVVKAINVKGGAGDYSRKDIDALGAFAANYGAKGLAWVKV 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK  +      +   LD  +GD   F A       +     R  + 
Sbjct: 362 EAD-----GVKGPIAKFFDEEKQSKLIEALDAAEGDLLLFGADQFEVVAASLGALRLKLG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +E G+I+ N F F W++D+P  E + EE +   AH+PFTMP      L       +KA  
Sbjct: 417 KERGLIDENLFNFLWVIDWPLLEHDPEEGRFYAAHHPFTMPVREDLELIETAPEDMKAQA 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+  G IR    ++  + F+ +G S E    +FG L  AF+ G PPHGGIA 
Sbjct: 477 YDLVLNGYELGGGSIRIFEKDIQEKMFALLGFSPEEAAEQFGFLLEAFEYGAPPHGGIAL 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VMLL G  N+R+   FP + +   L+  +P  VS  QL EL L I +  K
Sbjct: 537 GLDRLVMLLAGRTNLRDTIAFPKTASASCLMTEAPGEVSDAQLDELHLSIKKKVK 591


>gi|292493817|ref|YP_003529256.1| aspartyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291582412|gb|ADE16869.1| aspartyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 595

 Score =  639 bits (1647), Expect = 0.0,   Method: Composition-based stats.
 Identities = 230/592 (38%), Positives = 336/592 (56%), Gaps = 5/592 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           R+H CGDL  + +   V L GWV+R R HGG+IF+D+RD  G+ Q+V +P+     F  A
Sbjct: 2   RSHYCGDLSEAHIDQEVTLCGWVNRRRDHGGVIFIDLRDREGLIQLVFDPEDSLDNFRRA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VRSE+VL + G V  R   T N ++ TGQ+E+ AQ++ +L+ AE  P PV  + E  E
Sbjct: 62  EQVRSEYVLQVKGRVRPRPEGTENPDLATGQVEVLAQELVLLNAAETPPFPVDEKLEVSE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR +YR++DLRR    + +  R+ II  +R  +    F++  TP+LT S+PEGARDFLV
Sbjct: 122 EIRLRYRYIDLRRPESLQRLRFRSEIIRQLRKFLDERGFLDIDTPVLTKSTPEGARDFLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + G F+ALPQ+PQ +KQLLM +G DRY+Q+  CFRDED R+DR P EF QLD+E S
Sbjct: 182 PSRTHPGQFFALPQSPQLFKQLLMIAGVDRYYQMVRCFRDEDLRADRQP-EFTQLDIETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +D+ +  ME +++ +F        +   F+R+ Y +A+  +G DKPDLR P+ +  V
Sbjct: 241 FLHEDEFMGLMEEMIKELFATVLGV-PLHTPFIRMPYAEALACFGLDKPDLRIPLRLVEV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF++      G         GG  +R   D   ++    G  GLAYI   
Sbjct: 300 GDLMKTVEFKVFAEPAQDREGRVAALRLPGGGKLSRKEIDDYTKFVAIYGAKGLAYIKVV 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K L      AI  R   +DGD  FF A             R  +  
Sbjct: 360 ERSRGREGLQSPILKFLPDEVVGAIMDRTGAEDGDVIFFGADKASIVNEALGALRVKLGH 419

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           + G++  + +   W++DFP +EW+E   + +  H+PFT P+     L   +  + ++  Y
Sbjct: 420 DHGLV-EHGWRPLWVIDFPMFEWDESSNRWNALHHPFTSPKEEDLPLLEQNPGACRSRAY 478

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+  G +R   S V  Q F  +GI  E  + +FG L  A + G PPHGGIA G
Sbjct: 479 DLVLNGTEVGGGSMRIFRSPVQSQVFRLLGIGDEEAKEKFGFLLDALKYGCPPHGGIAFG 538

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+VML+ G+ ++REV  FP +Q     L G+P  V+  QLRELG+R+ ++
Sbjct: 539 LDRLVMLMTGSASIREVIAFPKTQTAACPLTGAPGLVAEAQLRELGIRVRKS 590


>gi|161502985|ref|YP_001570097.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189082138|sp|A9MND2|SYD_SALAR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|160864332|gb|ABX20955.1| hypothetical protein SARI_01047 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 590

 Score =  639 bits (1647), Expect = 0.0,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 334/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADS--LPLDANHINTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E  + +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKDVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L+    EAI  R   Q+GD  FF A +           R  + ++
Sbjct: 357 RAKGLDGITSPVAKFLSTEIVEAILARTGAQNGDMIFFGADNKKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E ++ E  +   H+PFT P+    S       +  A  YD
Sbjct: 417 LSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKKAE 588


>gi|222151514|ref|YP_002560670.1| aspartyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|254781739|sp|B9E706|SYD_MACCJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|222120639|dbj|BAH17974.1| aspartyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 592

 Score =  639 bits (1647), Expect = 0.0,   Method: Composition-based stats.
 Identities = 228/596 (38%), Positives = 347/596 (58%), Gaps = 10/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +  S +G  + L GWV + R  GG+IF+D+RD  G+ Q+V NPD       IA
Sbjct: 4   RTTYCGLVTESYIGQEIILKGWVQKRRDLGGLIFIDLRDREGVVQIVFNPDFSKEALTIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+V+ + G V  R    IN  I TG++E+   ++ I++ +E  P  +  E +  E
Sbjct: 64  ETIRSEYVIEVHGKVTMRDEAVINPKIKTGKVEVQVSEVTIINKSETPPFQIEAETDSSE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR+ L      R +I  ++R  +    F E  TP+LT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRREPLANTFKMRHQITRAVRNYLDESGFYEVETPVLTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV +G FYALPQ+PQ +KQLLM  GFD+Y+QI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 184 PSRVQEGEFYALPQSPQIFKQLLMIGGFDKYYQIVKCFRDEDLRADRQP-EFTQIDIEMS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+Q+D+++  E +L+ + ++    +  +  F R+ Y++A+R YG DKPD R  + +  +
Sbjct: 243 FVDQEDVMSMNEGMLKRIMKDVKGIDI-ATPFPRMTYEEAMRDYGIDKPDTRFDMKLVTL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF   +      +   +       +R   D + E+A+  G  GLA++   
Sbjct: 302 NDLASKMEFKVFKGAVESGGAVKAIVVKGASDKYSRKDIDALQEYAKIYGAKGLAWVKVT 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +    + + GD   F+A       +  A+ RN + +
Sbjct: 362 ED-----GLNGPIAKFFEESHASELLDATNAEMGDLILFVADKWSVVNASLANLRNKLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+ N + F W+ D+P +E++EE  +   AH+PFT P+     +   D   ++A  Y
Sbjct: 417 ELGLIDENKYNFLWVTDWPLFEYDEELDRYFAAHHPFTAPKKEHVEMLKTDKEKVQANAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  E+  + F  +G S E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DVVLNGYELGGGSIRIHDQEMQKKMFEALGFSDEEAQEQFGFLMDAFKYGAPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597
           +DR+VMLL G  N+R+V  FP + +   LL  +PS V  +QL EL +++ +EN +K
Sbjct: 537 LDRMVMLLSGRSNLRDVIAFPKTASATCLLTDAPSKVDDKQLEELHIQLNIENSEK 592


>gi|238783295|ref|ZP_04627320.1| Aspartyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238715888|gb|EEQ07875.1| Aspartyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 595

 Score =  639 bits (1647), Expect = 0.0,   Method: Composition-based stats.
 Identities = 221/592 (37%), Positives = 330/592 (55%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANALNIINRSEP--LPLDSNQINSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGVD--LGDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   ++    G  GLA++    
Sbjct: 297 DLVKEVEFKVFSGPANDTKGRVAALRVPGGAQVTRKQIDEYGQFVGIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    EAI  R   + GD  FF A             R  + ++
Sbjct: 357 RAAGMEGVQSPIAKFLSAEVLEAILTRTQAESGDILFFGADSNKIVTDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     +   W++DFP +E ++ E  +   H+PFT P+            +  A  YD
Sbjct: 417 LQLTQLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKEMSPQQLAAAPTTAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+  Q F  +GI++     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V   
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVVAKK 587


>gi|256830602|ref|YP_003159330.1| aspartyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256579778|gb|ACU90914.1| aspartyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 598

 Score =  639 bits (1647), Expect = 0.0,   Method: Composition-based stats.
 Identities = 243/595 (40%), Positives = 338/595 (56%), Gaps = 16/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+C  LG   +G    L GWV   R HGG+IF+D+RD +G+TQVV +P+        A
Sbjct: 18  RTHTCAGLGTEQLGQEACLMGWVQYRRDHGGLIFIDLRDRHGLTQVVFSPEVAPEAHARA 77

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+E+VL I G+V +R  + IN  + TG IE+   + ++L+ A+  P P+    +  E
Sbjct: 78  HVLRTEFVLAIKGVVRARPDDMINPKLATGAIEVYVTEFKLLNTAKTPPFPIEDRVDVSE 137

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYRFLDLRR  +  N++ R+R+  S+R  +    F+E  TP+LT S+PEGARDFLV
Sbjct: 138 NLRLKYRFLDLRRKAMADNLILRSRVSQSVRRYLDELGFLEIETPVLTKSTPEGARDFLV 197

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVNQG FYALPQ+PQ +KQLLM  G DRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 198 PSRVNQGQFYALPQSPQLFKQLLMCGGMDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 256

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ ++   E ++  V  E      +S    R+ Y+ A+  YG DKPD+R  + + +V
Sbjct: 257 FVDEEQVMEMAEGMMARVLREALGQE-LSLPIPRMKYEQAMALYGVDKPDIRFGLTLTDV 315

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE    SEF++F+    +            GG  +R   D   E+ +  G  GLA+I  +
Sbjct: 316 TEIVRGSEFKLFATAALIK-----ALPVRGGGELSRKEIDDYTEFVKIYGAQGLAWIKIK 370

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D         P+AK L+      +   L +  GD  FF AG P    S   + R  + +
Sbjct: 371 ED-----GWQSPIAKFLSDAERAGLTEALGLVPGDIVFFQAGAPEMVNSALGNLRLKLGE 425

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
             G+I    F   W+ DFP  EW+ E K+    H+PFT            D     A  Y
Sbjct: 426 RFGLIPEGTFAPLWVTDFPLLEWDPEAKRWVAMHHPFTA--PKDMGALATDPGQAVARAY 483

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+  G IR H  E     FS +GI++E  + +FG L  A   G PPHGGIA G
Sbjct: 484 DLVLNGTEVGGGSIRIHNPETQQHMFSALGINEEEAQAKFGFLLDALVFGAPPHGGIAFG 543

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR++MLL GAK++R+V  FP +Q    L+  +PS V   QLR+LGLR+ E PK+
Sbjct: 544 LDRLIMLLTGAKSIRDVIAFPKTQKATCLMTEAPSAVENTQLRDLGLRLREKPKE 598


>gi|238796293|ref|ZP_04639802.1| Aspartyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238719738|gb|EEQ11545.1| Aspartyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 598

 Score =  639 bits (1647), Expect = 0.0,   Method: Composition-based stats.
 Identities = 221/592 (37%), Positives = 331/592 (55%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANALNIINRSEP--LPLDSNQINSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGVD--LGDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   ++    G  GLA++    
Sbjct: 297 DLVKEVEFKVFSGPANDAKGRVAALRVPGGAQVTRKQIDEYGQFVGIYGAKGLAWLKVNN 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    EAI  R   + GD  FF A             R  + ++
Sbjct: 357 RAAGMEGVQSPIAKFLSAEVLEAILTRTQAESGDILFFGADSNKIVTDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LQLTQLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKEMSPAELAAAPTTAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+  Q F  +GI++     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V   
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVVAKK 587


>gi|226945722|ref|YP_002800795.1| aspartyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511851|sp|C1DRG2|SYD_AZOVD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226720649|gb|ACO79820.1| aspartyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 591

 Score =  639 bits (1647), Expect = 0.0,   Method: Composition-based stats.
 Identities = 234/593 (39%), Positives = 336/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLEGQEVTLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRAETFAKAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R A  +N N+ +G IE+   ++++L+ AE  P P+    +  E 
Sbjct: 63  RVRSEYVVRITGKVRPRPAGAVNPNMASGAIEVLGYELDVLNQAETPPFPLDEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  +   +  R+ I +S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAAKLKLRSSITSSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI+   EN++R +F+E  +          + +++A+RRYG+DKPDLR P+ + +V 
Sbjct: 242 LDEADIMGITENMIRKLFKEVLDVEFGEL--PHMTFEEAMRRYGSDKPDLRIPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G              R+  D    +    G  GLAYI    
Sbjct: 300 DQLKAVEFKVFSGPANDPKGRVAALRVPGAASMPRSQIDDYTRFVGIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +   N + I  R+   DGD  FF A             R  +  +
Sbjct: 360 RAKGVEGLQSPIVKFIPKENLDVILDRVGAVDGDIVFFGADKAKIVSEALGALRIRLGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++ C  +   W++DFP +E N++   +   H+PFT P+   E L  N      +  YD
Sbjct: 420 LKLLTCE-WAPLWVVDFPMFEENDD-GSLSALHHPFTAPKCTPEELAAN-PAVALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI +   + +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRILGIDEAEQQEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA ++REV  FP +Q+   ++  +P  V  + LREL +R+ E PK
Sbjct: 537 DRLVMLMTGASSIREVIAFPKTQSAACVMTQAPGAVDAKALRELHIRLREQPK 589


>gi|163859168|ref|YP_001633466.1| aspartyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|229470547|sp|A9IHE2|SYD_BORPD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|163262896|emb|CAP45199.1| aspS [Bordetella petrii]
          Length = 595

 Score =  638 bits (1646), Expect = 0.0,   Method: Composition-based stats.
 Identities = 225/598 (37%), Positives = 339/598 (56%), Gaps = 9/598 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT   G++    +G  V L GWV+R R HGG+IF+D+RD  G+ Q+V +PD+A F  A+ 
Sbjct: 2   RTCYTGEVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRAGLAQIVFDPDNAAFATAER 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + GLV  R   T N  + +G++E+  +++EIL+ +   P  +  +    E+ 
Sbjct: 62  LRNEFCIRVTGLVRPRPEGTANPELASGEVEVLCKEVEILNASITPPFQLDDDNLS-ETT 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  +R LDLRR  + +N++ R R+   +R  +    FI+  TP+LT S+PEGARD+LVPS
Sbjct: 121 RLTHRVLDLRRPQMQRNLMLRYRVSIEVRKFLDQLGFIDIETPMLTKSTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF+
Sbjct: 181 RVNAGHFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSFL 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            + +I    E+++R VF+   N   +   F ++ + +A++RYG+DKPDLR  +   +VT+
Sbjct: 240 NEVEIRQIFEDMIRHVFKTVQNVE-LPAPFPQMTWTEAMQRYGSDKPDLRVSLEFTDVTD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                +F+VF+   +      V      G   +R+  D   ++    G  GLAYI     
Sbjct: 299 VMRDVDFKVFAAAATAPGSRVVALRVPGGAELSRSEIDAYTQFVGIYGAKGLAYIKVNDA 358

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA--- 421
             G      P+ K+L+      +  R   Q GD  FF A             R  I    
Sbjct: 359 SKGREGLQSPIVKNLHDAALAELLKRSGAQSGDIIFFGADRAKIVNDAIGALRVKIGHSE 418

Query: 422 --QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
             ++ G+ + + ++  W++DFP +E++EE+ +   AH+PFT P+ G E    +D     A
Sbjct: 419 FGKKAGLASSD-WKPLWVVDFPMFEYDEEDGRYTAAHHPFTSPKDGHEDFLESDPSKAFA 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I  E    +FG L  A Q G PPHGGI
Sbjct: 478 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAREKFGFLLDALQYGAPPHGGI 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+     K
Sbjct: 538 AFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSEVDEKQLRELHIRLRNVEVK 595


>gi|291485164|dbj|BAI86239.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 592

 Score =  638 bits (1646), Expect = 0.0,   Method: Composition-based stats.
 Identities = 231/595 (38%), Positives = 342/595 (57%), Gaps = 10/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+ CGD+    +G  V L GWV + R  GG+IF+D+RD  GI QVV NPD       +A
Sbjct: 4   RTYYCGDITEKAIGESVTLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKEALAVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP 121
           + +R+E+VL + G V++R   T+N N+ TG IE+ A  + +LS A+  P  +  +  E  
Sbjct: 64  EGIRNEYVLDVQGKVVAREEGTVNPNLKTGAIEIHANGVTVLSAAKTPPFAISDQAEEVS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R K+R+LDLRR  + + +  R  +  ++R  +    F++  TPILT S+PEGARD+L
Sbjct: 124 EDVRLKHRYLDLRRPAMFQTMQMRHNVTKAVRSFLDENGFLDIETPILTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMVSGIERYYQIARCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI++  E+++  +  E            R+ YD+A+ +YG+DKPD R  +++ +
Sbjct: 243 SFMSQEDIMSLAEDMMAKIMRETKGVEI-KLPLPRMTYDEAMNKYGSDKPDTRFDMLLTD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V++    +EF+VFS  ++     +   +    G  +R   D +  +A + G  GLA++  
Sbjct: 302 VSDIVKDTEFKVFSSAVANGGVVKAINVKGGAGDYSRKDIDALGAFAANYGAKGLAWVKV 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK  +      +   LD  +GD   F A       +     R  + 
Sbjct: 362 EAD-----GVKGPIAKFFDEEKQSKLIEALDAAEGDLLLFGADQFEVVAASLGALRLKLG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +E G+I+ N F F W++D+P  E + EE +   AH+PFTMP      L       +KA  
Sbjct: 417 KERGLIDENLFNFLWVIDWPLLEHDPEEGRFYAAHHPFTMPVREDLELIETAPEDMKAQA 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+  G IR    ++  + F+ +G S E    +FG L  AF+ G PPHGGIA 
Sbjct: 477 YDLVLNGYELGGGSIRIFEKDIQEKMFALLGFSPEEAAEQFGFLLEAFEYGAPPHGGIAL 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VMLL G  N+R+   FP + +   L+  +P  VS  QL EL L I +  K
Sbjct: 537 GLDRLVMLLAGRTNLRDTIAFPKTASASCLMTEAPGEVSDAQLDELHLSIKKKVK 591


>gi|296331701|ref|ZP_06874170.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675341|ref|YP_003867013.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151296|gb|EFG92176.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413585|gb|ADM38704.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 592

 Score =  638 bits (1646), Expect = 0.0,   Method: Composition-based stats.
 Identities = 232/595 (38%), Positives = 343/595 (57%), Gaps = 10/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+ CGD+    +G  V L GWV + R  GG+IF+D+RD  GI QVV NPD       IA
Sbjct: 4   RTYYCGDITEKAIGESVTLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKEALAIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP 121
           + +R+E+VL I G V++R   T+N N+ TG IE+ A  + +LS A+  P  +  +  +  
Sbjct: 64  EGIRNEYVLDIQGKVVAREEGTVNTNLKTGAIEIHADGVTVLSAAKTPPFAISDQAEDVS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R K+R+LDLRR  + + +  R  +  ++R  +    F++  TPILT S+PEGARD+L
Sbjct: 124 EDVRLKHRYLDLRRPAMFQTMQMRHNVTKAVRSFLDDNGFLDIETPILTKSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMVSGIERYYQIARCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI++  E+++  +  E      +     R+ YD+A+  YG+DKPD R  +++ +
Sbjct: 243 SFMSQEDIMSLAEDMMAKIMRETKGVE-LKLPLPRMTYDEAMNSYGSDKPDTRFDMLLTD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V++    +EF+VFS  ++     +   +    G  +R   D +  +A + G  GLA++  
Sbjct: 302 VSDIVKDTEFKVFSSAVANGGVVKAINVKGGAGDYSRKDIDALGAFAANYGAKGLAWVKV 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK  +      +   LD  +GD   F A       +     R  + 
Sbjct: 362 EAD-----GVKGPIAKFFDEEKQSKLIEALDAAEGDLLLFGADKFEVVAASLGALRLKLG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +E G+I+ N F F W++D+P  E + EE +   AH+PFTMP      L       +KA  
Sbjct: 417 KERGLIDENLFNFLWVIDWPLLEHDPEEGRFYAAHHPFTMPVREDLELIETAPEDMKAQA 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+  G IR    ++  + F+ +G S+E    +FG L  AF+ G PPHGGIA 
Sbjct: 477 YDLVLNGYELGGGSIRIFEKDIQEKMFALLGFSQEEAAEQFGFLLEAFEYGAPPHGGIAL 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VMLL G  N+R+   FP + +   L+  +P  VS  QL EL L I +  K
Sbjct: 537 GLDRLVMLLAGRTNLRDTIAFPKTASASCLMTEAPGEVSDAQLDELHLSIKKKVK 591


>gi|224583594|ref|YP_002637392.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|254781749|sp|C0Q2E8|SYD_SALPC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|224468121|gb|ACN45951.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322714954|gb|EFZ06525.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 590

 Score =  638 bits (1646), Expect = 0.0,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 331/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADS--LPLDANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTALQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L     +AI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLDGINSPVAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  YD
Sbjct: 417 LSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKKAE 588


>gi|332161514|ref|YP_004298091.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665744|gb|ADZ42388.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 598

 Score =  638 bits (1646), Expect = 0.0,   Method: Composition-based stats.
 Identities = 222/592 (37%), Positives = 333/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGVD--LGDFPVMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   ++    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDAKGRVAALRVPGGAQVTRKQIDEYGQFVGIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    +AI  R   + GD  FF A             R  + ++
Sbjct: 357 RAAGVEGVQSPIAKFLSADVLDAILARTQAESGDILFFGADSFKVVTDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   + +   W++DFP +E ++ E  +   H+PFT P+G           +  A  YD
Sbjct: 417 LALTKLDSWAPLWVVDFPMFE-DDSEGGLSAMHHPFTAPKGMSPEQLAAAPTTAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+  Q F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRTEMQQQVFGILGINEEEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V   
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVVTKK 587


>gi|23099474|ref|NP_692940.1| aspartyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|46577266|sp|Q8EPS0|SYD_OCEIH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|22777703|dbj|BAC13975.1| aspartyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 591

 Score =  638 bits (1646), Expect = 0.0,   Method: Composition-based stats.
 Identities = 234/590 (39%), Positives = 353/590 (59%), Gaps = 9/590 (1%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVR 66
            G L   ++G  V L GWV + R  GG+IF+D+RD  G+ QVV NPD      E A+++R
Sbjct: 7   AGRLNEKNIGEKVLLKGWVQKRRDLGGLIFIDLRDKSGLIQVVFNPDHSKKALETAENIR 66

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           SE+V+ I+G V++R   TIN ++ TG+IE++A  ++IL+ A+  P  +  E +  E +R 
Sbjct: 67  SEYVIEINGTVVARDEATINPSMKTGKIEVNASSVQILNKAKTPPFTIQDETDVSEDVRL 126

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           KYR+LDLRR++L +    R +   S+R  +  ++F+E  TPILT S+PEGARD+LVPSRV
Sbjct: 127 KYRYLDLRRNSLQETFRLRHQTTQSIRNYLNDKDFLEMETPILTKSTPEGARDYLVPSRV 186

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           + G FYALPQ+PQ +KQL+M  GF+RY+QIA CFRDED R+DR P EF Q+D+E SF+  
Sbjct: 187 HPGEFYALPQSPQLFKQLIMMGGFERYYQIARCFRDEDLRADRQP-EFTQIDIETSFLTS 245

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           D+I++  E++++ V +E  + +  S    R+ Y +A+ RYG+DKPD R  + + +V++  
Sbjct: 246 DEIMDMTEHMMKKVMKEVKDIDI-SLPLPRMPYQEAMDRYGSDKPDTRFDLELIHVSDIV 304

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366
             S F+VFS+ +       +  I  K    +R   D++ E+ +     GLA++      +
Sbjct: 305 ASSGFKVFSQAVDNGGKVALLNIKGKADNYSRKDIDKLTEYVKVYDAKGLAWLK-----A 359

Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426
                 GP+AK L+      IR R +++ GD   F+A             R ++ +ELG+
Sbjct: 360 DESELKGPIAKFLSEEEVAGIRDRANVEQGDLLLFVADKTNVVYDSLGALRLYLGKELGL 419

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           I+ + F F W+ D+P  E++E   +   AH+PFT            D  S++A  YDLV 
Sbjct: 420 IDESKFHFLWVTDWPLLEYDEGLGRYFAAHHPFTSAIEEDLDKLETDPASVRANAYDLVL 479

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           NGFE+  G IR H  E   Q F  +G S+E   ++FG L  A + G PPHGGIA G+DRI
Sbjct: 480 NGFELGGGSIRIHQKEQQDQMFKVLGFSEEEARSQFGFLLDALEYGAPPHGGIALGLDRI 539

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +MLL G  N+R+  LFP + +  DL+  +PS VS +QL+EL +++    K
Sbjct: 540 IMLLAGRSNLRDTILFPKTASASDLMTAAPSGVSDDQLQELSIQLQSGEK 589


>gi|300723087|ref|YP_003712385.1| aspartate tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297629602|emb|CBJ90205.1| aspartate tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 589

 Score =  638 bits (1646), Expect = 0.0,   Method: Composition-based stats.
 Identities = 219/594 (36%), Positives = 338/594 (56%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L ++  G  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    F  A 
Sbjct: 2   RTNYCGQLSLAHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQKEAFAQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ L I G+V +R    IN  + TG++E+ A+ + I + +E   LP+   +   E 
Sbjct: 62  ELRNEFCLQITGIVRARPDSQINQEMATGEVEVFAESLMIFNRSEP--LPLDSNQNNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSQRLKTRAKITSFVRRFMDDAGFLDVETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGEFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R +++E    +   +NF  + +++A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAGQVREIMEKMIRELWQEVRGVD--LDNFPIMTFEEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF++  +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DLVKDVEFAVFAEPANNPKGRVATLCVPGGAELSRKQIDEYGKFVGIYGAKGLAWMKVNN 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    E +  R + +DGD  FF A             R  + ++
Sbjct: 357 RAAGVEGVQSPIAKFLSAEVVEGLLARTNAKDGDILFFGADKKNVVTDAMGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I +   ++  W++DFP +E N  E  +   H+PFT P+    S   ++  S  A  YD
Sbjct: 417 LNITDLASWKPLWVIDFPMFEEN-GEGGLTAMHHPFTSPRDMSASELESNPESAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+++  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRNEMQQIVFRILGINEQEQQEKFGFLLNALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+VMLL    N+R+V  FP +     L+  +PS  +   L EL + +V+  ++
Sbjct: 536 DRLVMLLTNTDNIRDVIAFPKTTAASCLMTDAPSLANPSSLEELAISVVKKERE 589


>gi|16760851|ref|NP_456468.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29141457|ref|NP_804799.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213162636|ref|ZP_03348346.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213417350|ref|ZP_03350492.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
 gi|213426398|ref|ZP_03359148.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|289824028|ref|ZP_06543626.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|22257056|sp|Q8Z5W1|SYD_SALTI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|25293065|pir||AI0743 aspartate-tRNA ligase (EC 6.1.1.12) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16503148|emb|CAD05652.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137084|gb|AAO68648.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 590

 Score =  638 bits (1646), Expect = 0.0,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 331/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADS--LPLDANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L     EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  YD
Sbjct: 417 LSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHVGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKKAE 588


>gi|85373620|ref|YP_457682.1| aspartyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|123409673|sp|Q2NBQ6|SYD_ERYLH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|84786703|gb|ABC62885.1| aspartyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 604

 Score =  638 bits (1646), Expect = 0.0,   Method: Composition-based stats.
 Identities = 321/599 (53%), Positives = 416/599 (69%), Gaps = 9/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C  L   +VG  VRLSGWVH  R HGG++F+D+RDHYGITQ+VA+ DSA   
Sbjct: 1   MHAYRTHNCAALSKKNVGETVRLSGWVHNKRDHGGVLFVDLRDHYGITQIVADEDSAALP 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +   ++ E V+ IDG V +R AE +N N+ TG+IE+ A+ +EI S AEELPL V    +Y
Sbjct: 61  VLDKLKLESVVTIDGDVKARDAEAVNPNLPTGEIEVFARSVEIQSRAEELPLIVNSAEDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRF+DLRR+ LH+NI+ R+++I S+R RM A+ F E  TPIL ASSPEGARD+
Sbjct: 121 PEDVRLKYRFVDLRRERLHRNIMLRSQVITSIRNRMTAQGFTEFQTPILAASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR++ G+FYALPQAPQ +KQLLM +GFDRYFQIAPCFRDED R+DR P EFYQLD E
Sbjct: 181 IVPSRLHPGTFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDLRADRSP-EFYQLDFE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN--TVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+D+   +E VL GVFEEF+NG   T S  F RI Y +A+ +YGTDKPDLRNP++
Sbjct: 240 MSFVTQEDVFQAIEPVLAGVFEEFANGKSVTKSGEFPRIPYAEAMLKYGTDKPDLRNPLV 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +VT+HF  S F +F KI+ +     V   P      +R F D MN+WAR +G  GL Y
Sbjct: 300 ISDVTDHFQSSGFGLFEKIVGIGGRVRVIPAPNTQEK-SRKFFDDMNDWARKEGFAGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  +  E G     GP+AK+    N + I   L + + D  FF AG        A  AR 
Sbjct: 359 VTRKQGEFG-----GPIAKNHGPENMQKIYDELGLGENDGLFFAAGKEKDAAKLAGAART 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +ELG+I   CF+FCWI+DFP +E++EE KKIDF+HNPF+MPQG ME+L+  D L I 
Sbjct: 414 RVGEELGLIEQGCFKFCWIVDFPMFEYDEELKKIDFSHNPFSMPQGEMEALENKDPLEIL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG+E++SG IRNH  E+M +AF   G  +E V+  F G+  AF+ G PPHGG
Sbjct: 474 AWQYDIVCNGYELSSGAIRNHKPEIMYKAFEIAGYDRETVDREFSGMIEAFKLGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            A GIDRIVMLL    N+REV  FP++Q   DL+MG+PS V  + LR++ +R VE PKK
Sbjct: 534 SAPGIDRIVMLLADEPNIREVIAFPLNQKAQDLMMGAPSQVPPKALRDVHIRTVEPPKK 592


>gi|297544515|ref|YP_003676817.1| aspartyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842290|gb|ADH60806.1| aspartyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 592

 Score =  638 bits (1646), Expect = 0.0,   Method: Composition-based stats.
 Identities = 248/590 (42%), Positives = 351/590 (59%), Gaps = 10/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTH CG+L V DV   V + GWV R R HGG++F+D+RD  GI QVV N +  S  FE 
Sbjct: 9   KRTHMCGELTVEDVDKSVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFNNEVSSEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            + VRSE+VL I+G V+ R+ E +N  I TG+IE+ A  ++ILS +E  P P+       
Sbjct: 69  VQGVRSEYVLAIEGKVVKRAPENVNPKIATGEIEIYANTLKILSKSETPPFPIEDRSNVS 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR ++ KN++ R +I   +R  +    FIE  TP+L  S+PEGARD+L
Sbjct: 129 EAIRLKYRYLDLRRPSMQKNLMTRFKITKVVRDFLNKNGFIEIETPLLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EM
Sbjct: 189 VPSRIYPGKFYALPQSPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE DD+L   E ++  +F+E    + V+  F R+ Y +A+ R+GTDKPDLR  + + +
Sbjct: 248 SFVEVDDVLEINEKMIAQIFKETLGID-VTIPFKRLSYQEAMERFGTDKPDLRFGMELKD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    SEF VF   L  +       + +      R   D + E A++ G  GL ++  
Sbjct: 307 LSDIVSRSEFNVFKTALKNSGSVRGINVKS-AASMPRRQLDELVELAKTYGAKGLLWMQV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             +E        P  K L+    E I  RL+ + GD    +A             R  + 
Sbjct: 366 FENE-----VKSPATKFLSEEEIEKILERLEAETGDLLLIVADKDEIVFDTLGHLRLELG 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L +I+ N +EF WI+DFP  E++ EEK+    H+PFT P+     L   + L ++A  
Sbjct: 421 KRLNLIDENKYEFVWIVDFPLLEYDSEEKRYVAKHHPFTAPKDEDIDLLEKEPLKVRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H +E+  + F  +G S E    RFG L  AF+ G PPHGGIA 
Sbjct: 481 YDIVLNGVEIGGGSIRIHDTELQKRMFKVLGFSDEKAWERFGFLMEAFKYGAPPHGGIAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+ M++ G+  +R+V  FP +QN   L+  +PS VS EQL+EL +++
Sbjct: 541 GLDRLAMIITGSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 590


>gi|16765243|ref|NP_460858.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167994202|ref|ZP_02575294.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|22257058|sp|Q8ZNV2|SYD_SALTY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|16420437|gb|AAL20817.1| aspartate tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|205327868|gb|EDZ14632.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|261247071|emb|CBG24892.1| AspRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267993884|gb|ACY88769.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301158421|emb|CBW17930.1| Aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|321224545|gb|EFX49608.1| Aspartyl-tRNA synthetase ; unambiguous [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323130185|gb|ADX17615.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332988794|gb|AEF07777.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 590

 Score =  638 bits (1646), Expect = 0.0,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 332/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADS--LPLDANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L     EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNNKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  YD
Sbjct: 417 LSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEGAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  ++  L ELG+++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANLAALTELGIQVVKKAE 588


>gi|94987429|ref|YP_595362.1| aspartyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731678|emb|CAJ55041.1| Aspartyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 599

 Score =  638 bits (1646), Expect = 0.0,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 352/593 (59%), Gaps = 14/593 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
            R+H+CG+L + D+G  V L GWV   R HGG+IF+D+RD +GITQVV +PDS       
Sbjct: 18  KRSHTCGELSIKDIGKHVILMGWVQSRRDHGGLIFVDLRDRFGITQVVFSPDSSLEAHST 77

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +R E+V+ +DG+V  R    IN N+ TGQIE+     ++L++++  P  +    E  
Sbjct: 78  AHIIRPEYVIAVDGIVRMRPEGMINPNLETGQIEILVSSWKLLNISKTPPFQIEDNIETG 137

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R ++R+LDLRR  + KNI+ R+  +  +R  + +  F+E  TP LT S+PEGARDFL
Sbjct: 138 ETLRLQWRYLDLRRPVMKKNIILRSNAMQIIRNYLSSHGFLEIETPFLTKSTPEGARDFL 197

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G  +ALPQ+PQ +KQL M +G DRYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 198 VPSRLYHGKLFALPQSPQIFKQLCMVAGLDRYFQITRCFRDEDLRADRQP-EFTQIDIEM 256

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV ++ ++   E++++ +F+E      +S  F RI + +A+++YG DKPD+R  + +H+
Sbjct: 257 SFVNEEQVMECAEHLMQTLFQEAL-STEISLPFPRITWFEAMKQYGVDKPDIRFGLELHD 315

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VT     SEF++FS    V            G   +R   D   E+ ++ G  GLA+I  
Sbjct: 316 VTSIVHMSEFKLFSHAKLVK-----AIRVPGGASLSRKEIDDFTEFVKNYGAQGLAWIKI 370

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             +E        P+AK L+    E + + L++  GD  FF AG P    +   + R  + 
Sbjct: 371 NEEE-----WQSPIAKFLSEKEKEELSIELNVSKGDILFFQAGSPEVVNAALGNLRVQLG 425

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             LG+I  N + F W+ DFP YE++EEE++    H+PFT P+         +   +KA  
Sbjct: 426 NYLGLIPQNTWSFVWVTDFPLYEYSEEERRYVSCHHPFTAPKESDIHFMKTNPAEVKARA 485

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR H +E+    F ++G S E ++ +FG    A + G PPHGGIA 
Sbjct: 486 YDLVLNGNEVGGGSIRIHQAEIQRHLFEDLGFSLEDIQQQFGFFIEALEYGAPPHGGIAF 545

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR+VML+  ++++R+V  FP +Q     L G+P  VS +QLRELGL +   
Sbjct: 546 GLDRLVMLMSNSESIRDVIAFPKTQKGACPLTGAPDFVSSKQLRELGLTLRNK 598


>gi|62180479|ref|YP_216896.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|81309667|sp|Q57N96|SYD_SALCH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62128112|gb|AAX65815.1| aspartate tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
          Length = 590

 Score =  638 bits (1646), Expect = 0.0,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 332/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADS--LPLDANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E+SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVEISF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTALQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L     +AI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLDGINSPVAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  YD
Sbjct: 417 LSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKKAE 588


>gi|114800235|ref|YP_760952.1| aspartyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123027890|sp|Q0BZZ1|SYD_HYPNA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|114740409|gb|ABI78534.1| aspartyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 609

 Score =  638 bits (1645), Expect = 0.0,   Method: Composition-based stats.
 Identities = 321/608 (52%), Positives = 423/608 (69%), Gaps = 14/608 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG+L  S VG  V++SGW+HR R HGG++F+D+RDHYG+TQ+V NP S  F 
Sbjct: 1   MHAYRTHTCGELRKSHVGETVKISGWLHRRRDHGGVMFIDLRDHYGLTQIVFNPGSPGFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R+E V+ ++G V++R AE +NAN+ TG+IE+    + + S A ELP+PVFG+  Y
Sbjct: 61  TVERLRAESVITVEGKVVARDAELVNANLGTGEIEVVGGAVSVQSEAAELPMPVFGDHSY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR K+R+LDLRR+ LHKN+V R+++I S+R RM+AE F E  TPILTASSPEGARDF
Sbjct: 121 PEEIRLKHRYLDLRREQLHKNMVLRSQVIASLRRRMVAEGFTEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLHPGEFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTV-----SNNFLRICYDDAIRRYGTDKPDLRN 295
           MSFV Q+D+ N++E V+RGVFEEF++            F+ I Y +A+ +YG DKPDLRN
Sbjct: 241 MSFVTQEDVFNSIEPVMRGVFEEFADWEGKGRKVAEGPFVHIPYAEAMLKYGVDKPDLRN 300

Query: 296 PIIMHNVTEHFVHSEFR--VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG- 352
           PI+  +V++  +  +    VF KI+           P  G    R+F D+M+ WA+ +  
Sbjct: 301 PILCSDVSDIMMRDDVTLAVFKKIVGGGGIVRAIPAPNSGDQ-PRSFFDKMDAWAKKEMQ 359

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
            PGL Y+ + ++E+G +   GP+AK        A+  +  ++ GD+ FF AGD       
Sbjct: 360 APGLGYMRF-VEENGALTATGPIAKFFEPAALAALAEKAGVKAGDALFFSAGDKTAAVRL 418

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
              AR  + +ELGII    F FCWI+DFP YEW+E+ KK+DF+HNPF+MPQGGME+L   
Sbjct: 419 QGQARIRVGEELGIIEPGVFRFCWIVDFPMYEWDEDNKKVDFSHNPFSMPQGGMEALLAA 478

Query: 473 DL----LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           D     L +KAFQYD+VCNG E++SG IRNH  EVML+AF   G   EVVE +FGG+  A
Sbjct: 479 DTVEKQLDLKAFQYDIVCNGVELSSGAIRNHRPEVMLKAFELAGYGPEVVEAKFGGMLNA 538

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           F+ G PPHGGIA G+DRIVMLL    ++R+V LFPM+Q   DLLMG+PS V   QL+EL 
Sbjct: 539 FRYGAPPHGGIAPGVDRIVMLLAETDSLRDVILFPMNQQARDLLMGAPSPVDERQLKELN 598

Query: 589 LRIVENPK 596
           +R+    K
Sbjct: 599 IRLAPVVK 606


>gi|303238650|ref|ZP_07325183.1| aspartyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302593769|gb|EFL63484.1| aspartyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 594

 Score =  638 bits (1645), Expect = 0.0,   Method: Composition-based stats.
 Identities = 232/590 (39%), Positives = 346/590 (58%), Gaps = 9/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61
            RTH CG+L  S VG  V + GW H+ R  GG+IF+D+RD  GI QVV N + +   F  
Sbjct: 9   KRTHRCGELDASHVGQKVTVMGWAHKRRDLGGVIFVDMRDRTGILQVVFNNEISGEIFGK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++RSE+VL + G V+ RS ET+N+ I TG+IE+ A ++ ILS +E  P+ +  + +  
Sbjct: 69  AEAIRSEYVLAVVGEVVRRSPETVNSKIPTGEIEVIANELRILSSSETPPVYIEEDTDVN 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R K+R+LDLRR  + +N++ R ++    R       F+E  TP+LT S+PEGARD+L
Sbjct: 129 ETLRLKHRYLDLRRPDMQRNLILRHKVAKIARDYYDENGFLEIETPMLTKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G F+ALPQ+PQ +KQLLM SGFDRY QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 189 VPSRVHPGKFFALPQSPQLFKQLLMVSGFDRYIQIVKCFRDEDLRADRQP-EFTQIDLEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV  +D+L   E  ++ VF+E      +   FLR+ Y +A+ R+G+DKPD+R  + + N
Sbjct: 248 SFVNVEDVLQINEGFIKKVFDEALGVK-LETPFLRMTYQEAMDRFGSDKPDIRFGLELIN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++   +  F+VFS  +              G   +R   D + E+ +     G+A+I  
Sbjct: 307 ISDMVENCGFKVFSDAVKNGGSVRAINAKGCGRIFSRREIDSLVEFVKIYKAKGMAWIVV 366

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             +E         + K  +    +AI  R+  + GD   FIA             R  IA
Sbjct: 367 EENE-----LKSAITKFFSEDEVKAILERVKAEPGDLICFIADKNEVVYDSLGQLRLEIA 421

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   +I+   F+F W+ +FP  E++EEEK+    H+PFT P          D   ++A  
Sbjct: 422 RRTNLIDEKEFKFLWVTEFPLLEYDEEEKRWVAKHHPFTSPMDEDLQYLDTDPGKVRAKA 481

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H   +  + FS +GI++E   +RFG L  AF+ G PPHGG+A 
Sbjct: 482 YDIVLNGTEIGGGSIRIHDQFLQSKMFSLIGINEEQAADRFGFLLEAFKYGTPPHGGLAF 541

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+VM++ G  ++R+V  FP  QN  DL+  +P  V  +Q++EL +++
Sbjct: 542 GLDRLVMIMAGKSSIRDVIAFPKVQNASDLMSNAPDIVEDKQIKELHIKL 591


>gi|90020560|ref|YP_526387.1| aspartyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|122996443|sp|Q21MA4|SYD_SACD2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|89950160|gb|ABD80175.1| aspartyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 594

 Score =  638 bits (1645), Expect = e-180,   Method: Composition-based stats.
 Identities = 229/597 (38%), Positives = 341/597 (57%), Gaps = 10/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+  CG +  S++   + L GWV R R HGG+IF+D+RD  GI QVV +PD+   F +A 
Sbjct: 2   RSVYCGVVNTSNIDQEITLCGWVDRRRDHGGVIFIDLRDREGIVQVVFDPDAADKFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR E+VL + G V +RS  T+NAN+ TGQIE+    +EIL+ AE  P  +       E 
Sbjct: 62  KVRPEYVLRVTGKVRARSEATVNANMATGQIEVYGTDLEILNSAETPPFQLDEHTNVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRRD + + +  R+++ N++R  +   +F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKYRYLDLRRDAMQQRLKFRSKVTNAIRNYLDDNDFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHDGKFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ I++  E ++  +F E          F R+ Y +A+ +YG+DKPD+R P+ M  + 
Sbjct: 241 MDEEQIMSVTEGMISKLFRELKGVELGE--FPRMPYAEAMEKYGSDKPDMRIPLEMVEIK 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   S   G         GG   R   D   ++    G  GLAYI    
Sbjct: 299 DLMASVDFKVFSGPASDPKGRVTAMKVPGGGEIPRKKIDAYTKFVSIYGAKGLAYIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
                     P+ K L     +A+  RL++++GD  FF A             R  + ++
Sbjct: 359 KTDLEGGLQSPIVKFLPQDVLQALLDRLEVENGDLIFFGADSAKVVTEALGALRCELGKD 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +  C  +   W++DFP +E   E+  +   H+PFT P    E L  N   +  +  YD
Sbjct: 419 LNLYTCE-WAPLWVVDFPMFE-ELEDGSLTALHHPFTAPSCSPEELSAN-PATALSRAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H   +  + F  +GI +E    +FG L  A + G PPHGG+A G+
Sbjct: 476 MVLNGTELGGGSIRIHDQSMQQEVFRVLGIGEEEQREKFGFLLDALKYGAPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR---IVENPKK 597
           DR++ML+ GA ++R+V  FP +Q+   ++  +P  V  +QL EL +R   +V  PK+
Sbjct: 536 DRLIMLMTGASSIRDVIAFPKTQSAACVMTDAPGAVDKKQLEELHIRLRPVVAQPKE 592


>gi|330861469|emb|CBX71688.1| aspartyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 611

 Score =  638 bits (1645), Expect = e-180,   Method: Composition-based stats.
 Identities = 222/592 (37%), Positives = 333/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGVD--LGDFPVMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   ++    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDAKGRVAALRVPGGAQVTRKQIDEYGQFVGIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    +AI  R   + GD  FF A             R  + ++
Sbjct: 357 RAAGVEGVQSPIAKFLSADVLDAILARTQAESGDILFFGADSFKVVTDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   + +   W++DFP +E ++ E  +   H+PFT P+G           +  A  YD
Sbjct: 417 LALTKLDSWAPLWVVDFPMFE-DDSEGGLSAMHHPFTAPKGMSPEQLAAAPTTAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+  Q F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRTEMQQQVFGILGINEEEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V   
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVVTKK 587


>gi|150390123|ref|YP_001320172.1| aspartyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149949985|gb|ABR48513.1| aspartyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 591

 Score =  638 bits (1645), Expect = e-180,   Method: Composition-based stats.
 Identities = 229/593 (38%), Positives = 344/593 (58%), Gaps = 11/593 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M+  R+H  G L    +G  V L+GWV + R  GG+IF+DIRD  G++QVV + D     
Sbjct: 4   MNMKRSHMAGSLRTEHIGETVTLTGWVQKRRDLGGLIFVDIRDRSGMSQVVFDKDISQEA 63

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F  A+++ SE+V+   G V  R   ++N N+ TG++E+    +E+L+ AE  P+ +  + 
Sbjct: 64  FNQAETLGSEYVISARGKVFKR--HSVNPNMPTGEVEIFVDTLEVLNTAETTPIYIKDDD 121

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E++R KYR+LDLR+ ++ KN++ R  +   +R  +  E FIE  TP+LT  +PEGAR
Sbjct: 122 DVGENLRLKYRYLDLRKSSMQKNLMLRHTVSKIVRNFLSDEGFIEVETPMLTKPTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G F+ALPQ+PQ +KQLLM SG +RYFQI  CFRDED R+DR P EF Q+D
Sbjct: 182 DYLVPSRVNPGKFFALPQSPQLFKQLLMVSGMERYFQIVKCFRDEDLRADRQP-EFTQID 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            EMSFV+Q DI+   EN+L+ VF++  + +     F ++ YD+A+ RYG+DKPD+R    
Sbjct: 241 CEMSFVDQQDIIEMNENLLKKVFKDALDIDI-QLPFPQMPYDEAMERYGSDKPDIRFDFE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + ++ E    S F+VFS  +      +   +       +R     + E+ ++ G  GLA+
Sbjct: 300 LVDLGEIVKESGFKVFSSAIQNGGFVKAINVKGYAEQFSRKDITSLEEFVKTYGAKGLAW 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +              P+AK  N   T+A+    D   GD   F+A  P          R 
Sbjct: 360 MKVTA-----EGVTSPIAKFFNEDETKALLEATDANSGDLLLFVADQPKVVYDSLGHLRI 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+ LG++N   F+  W+ DFP +E++EEE +    H+PFT P      L       ++
Sbjct: 415 EVAKRLGLLNKEEFKMLWVTDFPLFEYDEEENRYMAMHHPFTSPVDEDIPLLDTHPEKVR 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R   SE+  + F  +G S+E    +FG L  AF+ G PPHGG
Sbjct: 475 AKAYDIVLNGYEIGGGSLRIFSSELQQKMFKTLGFSEEEAWEKFGFLLEAFKYGTPPHGG 534

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IA G+DR+VM+L   +N+R+V  FP +QN    +  +PS    +QL+EL +R+
Sbjct: 535 IAFGLDRLVMILAQEENIRQVIAFPKTQNAICPMTNAPSIADEKQLKELAIRV 587


>gi|56413180|ref|YP_150255.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362106|ref|YP_002141743.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|62287526|sp|Q5PMZ6|SYD_SALPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238690744|sp|B5BH54|SYD_SALPK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56127437|gb|AAV76943.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197093583|emb|CAR59046.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 590

 Score =  638 bits (1645), Expect = e-180,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADS--LPLDANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L     EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  YD
Sbjct: 417 LSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+ +V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIPVVKKAE 588


>gi|303230759|ref|ZP_07317506.1| aspartate--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514519|gb|EFL56514.1| aspartate--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 600

 Score =  638 bits (1645), Expect = e-180,   Method: Composition-based stats.
 Identities = 231/596 (38%), Positives = 355/596 (59%), Gaps = 9/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61
           +RTH CG +  ++VG  V L GWV R R HGG+IFLD+RD  GI QVVA+PD     F  
Sbjct: 8   HRTHGCGTISEAEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGIVQVVASPDHNVESFHK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VLC+ G +  R  E IN N+ TG  E+  +++ +L+ A+  P  +    +  
Sbjct: 68  AEDVRNEYVLCVRGKITKRDEEAINPNLPTGAYEMYCEELRVLNSAKTPPFYIQDNIDVD 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + +N++ R ++  +MR    + +F+E  TP+LT S+PEGARD+L
Sbjct: 128 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 188 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDLEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++DI   +E ++  VF++            RI +D+A+ +YG+DKPDLR  +   +
Sbjct: 247 SFVDEEDIYALLEQMVAEVFKKTLGKEI-PLPMPRITWDEAMDKYGSDKPDLRFDMAFTD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VTE    +EF+VF  ++      +   +P    G  R   D +  +    G  GLA+  +
Sbjct: 306 VTELVKDTEFKVFRSVIDNGGIVKGIVVP-GDAGIPRRELDDLVAYVNRYGAKGLAWACF 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D     +    + K L       I  ++  + GD    IA           + R  +A
Sbjct: 365 NEDG----SIKSQIMKFLGEDTIRNIGEKMGAKGGDLVLMIADKTATVARALGELRLEMA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + + +I+ +   F W+ DFP +E+NE+EK+    H+PFTMP+        +D  S+KA  
Sbjct: 421 RRMNMIDEDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHEDLDKLQSDPGSVKAIA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R + S+V  + F  +G+S+E  +++FG +  AF+ G PPH G A 
Sbjct: 481 YDMVLNGVEIGGGSLRIYQSDVQEKVFKAIGLSEEEAKSKFGFMLDAFKYGAPPHAGCAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QL+EL ++     ++
Sbjct: 541 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIKPDVEEEE 596


>gi|238792579|ref|ZP_04636212.1| Aspartyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238728214|gb|EEQ19735.1| Aspartyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 598

 Score =  638 bits (1645), Expect = e-180,   Method: Composition-based stats.
 Identities = 222/592 (37%), Positives = 331/592 (55%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    FE A 
Sbjct: 2   RTEYCGQLNLSHVGQSVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAFEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANALNIINRSEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKSRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGVD--LGDFPVMTFAEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   ++    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDAKGRVAALRVPGGAQVTRKQIDEYGQFVSIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    EAI VR   + GD  FF A             R  + ++
Sbjct: 357 RAAGVEGVQSPIAKFLSAEVLEAILVRAQAESGDILFFGADSNKIVTDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     +   W++DFP +E ++ E  +   H+PFT P+            +  A  YD
Sbjct: 417 LELTKLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKEMSPEQLAAAPTTAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+  Q F  +GI++     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V   
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVVAKK 587


>gi|329120697|ref|ZP_08249359.1| aspartate--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327460494|gb|EGF06830.1| aspartate--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 602

 Score =  637 bits (1644), Expect = e-180,   Method: Composition-based stats.
 Identities = 232/605 (38%), Positives = 349/605 (57%), Gaps = 12/605 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F++A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFKLAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +++G+IE+ A++IEIL+ A   P  +  +    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMVSGKIEILAKEIEILNPAATPPF-MIDDENISET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R + R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLQNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF+E         +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKEALGVE--LGDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKLSRKEIDEYTQFVGIYGAKGLAYIKVND 357

Query: 364 DES----GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +     N     P+ K L+  +   I  R   Q+GD  FF A             R  
Sbjct: 358 VSNLSNGENSGLQSPIVKFLSESSLHEIIKRTGAQNGDIIFFGADKAKVVNEAIGALRIK 417

Query: 420 IAQELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           I +E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D  +
Sbjct: 418 IGKEHGAENGYFVDEWKPLWVVDFPMFEYDEENDRWAAMHHPFTSPKPGHEDLMESDPEN 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G IR H +++  + F+ + IS E  + +FG L    + G PPH
Sbjct: 478 CLARAYDMVLNGWEIGGGSIRIHRADIQEKVFAALKISPEEQQEKFGFLLDNLKFGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P  V  +QLRELGLR+ +   
Sbjct: 538 GGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPGAVDDKQLRELGLRLRQKAA 597

Query: 597 KILKI 601
           +  ++
Sbjct: 598 ESKEV 602


>gi|71736289|ref|YP_275916.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|97196800|sp|Q48FC1|SYD_PSE14 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71556842|gb|AAZ36053.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 591

 Score =  637 bits (1644), Expect = e-180,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 345/593 (58%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDSGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G              R+  D   ++    G  GLAYI    
Sbjct: 300 DQLTGVEFKVFSGPANDPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +   N   I  R+   DGD  FF A             R  I  +
Sbjct: 360 RAKGPEGLQSPIVKFIPEDNLNVILDRVGAVDGDIVFFGADKFKIVSEALGALRIKIGND 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +  C  +   W++DFP +E N++       H+PFT P+   E L+ N   +  +  YD
Sbjct: 420 LKLHTCE-WAPMWVVDFPMFEENDD-GSFTALHHPFTAPKCTPEELEAN-PATALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 537 DRLVMLMAGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|197284982|ref|YP_002150854.1| aspartyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|238693144|sp|B4ETP3|SYD_PROMH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|194682469|emb|CAR42399.1| aspartyl-tRNA synthetase [Proteus mirabilis HI4320]
          Length = 594

 Score =  637 bits (1644), Expect = e-180,   Method: Composition-based stats.
 Identities = 215/592 (36%), Positives = 333/592 (56%), Gaps = 6/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L  + VG  V L GWV+R R  GG+IF+D+RD  GI QV  +P+    F  A 
Sbjct: 2   RTNYCGQLNSAHVGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPEQKEAFSQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R    +N N+ TG+IEL+A+ + I + +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQVTGTVRARPDSQVNKNMATGEIELAAESLSIFNRSE--ALPLDSNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  YR+LDLRR  + + +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 RRLTYRYLDLRRPEMSQRLKTRAKITSFVRRFMDGEGFLDVETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++  ++ +  N +     F  + + +A+RRYG+DKPDLRNP+ + ++ 
Sbjct: 239 MTAEQVREVMERMIHALWLDILNVD--LGAFPVMTFAEAMRRYGSDKPDLRNPMELIDIA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF VF++  +      +      G    R   D   ++    G  GLA++    
Sbjct: 297 DLVKNVEFSVFAQAANDEKCRVIALRVPGGASLTRKNIDEYTQFVSIYGAKGLAWMKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+AK L      +I    +  DGD  FF AG            R  + ++
Sbjct: 357 KAKGIEGVQSPIAKFLTNDVVNSILAATNATDGDLIFFGAGRQGTMSDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + N ++  W++DFP +E +E+   +   H+PFT P+    +      +   A  YD
Sbjct: 417 LELTDLNAWKPLWVIDFPMFEEDEDTGSLSAMHHPFTSPKDLTPAELTAHPVGAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    FS +GI+ +    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIHRNEMQQAVFSILGITPDEQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     L+  +PS  + + L+EL +++ E  
Sbjct: 537 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTNAPSFANEDALKELAIQVTEKE 588


>gi|294341509|emb|CAZ89926.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Thiomonas sp. 3As]
          Length = 599

 Score =  637 bits (1644), Expect = e-180,   Method: Composition-based stats.
 Identities = 225/596 (37%), Positives = 339/596 (56%), Gaps = 10/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           R+  CG +  + +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD A  F  A+
Sbjct: 4   RSQYCGQVTEAQMGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAAMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + GLV  R A T N  + +G+IE+    I +L+ +   P  +  +    E+
Sbjct: 64  GLRNEFCVQVQGLVRPRPAGTENEGMTSGKIEVLCHDITVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+  ++R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLKLRYRVAMAVRRFLDGQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQ+LM +GFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGEFFALPQSPQLFKQMLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++RGVF++  +   ++  +  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LNEQEIRDLFETMIRGVFKDVLDIE-LATPYPVMTYAEAMARFGSDKPDLRVKMEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G  V      GG  +R+  D   E+ +  G  GLA+I    
Sbjct: 301 DVMADVDFKVFSGPATTPGGRVVALRVPGGGEMSRSEIDAYTEFVKIYGAKGLAWIKVND 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+L+     A+  R   Q+GD  FF A             R  I   
Sbjct: 361 VSKGRDGLQSPIVKNLHDAAITAVLQRSGAQNGDLLFFGADKSKVVADAIGALRVKIGHS 420

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +  G+   N ++  W++DFP +E++E+ ++    H+PFT P+ G E L         
Sbjct: 421 EFGKSHGLF-ENVWKPLWVVDFPMFEFDEDNQRWAAVHHPFTAPKDGHEELMDTAPEKCI 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R H +EV  + FS + I  +    +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHRAEVQSKVFSALKIGPDEARAKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QL+EL +R+   
Sbjct: 540 IAFGLDRIVTMMTGAQSIRDVIAFPKTQRAQCLLTNAPSPVDEKQLKELHIRLRNP 595


>gi|254294268|ref|YP_003060291.1| aspartyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254042799|gb|ACT59594.1| aspartyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 605

 Score =  637 bits (1643), Expect = e-180,   Method: Composition-based stats.
 Identities = 320/606 (52%), Positives = 415/606 (68%), Gaps = 10/606 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L    VG  VR+SGWVHR R HGG++F+D+RDHYG+TQ V  PD+A F 
Sbjct: 1   MHAYRTHTCGQLRSEHVGETVRISGWVHRKRDHGGLLFIDLRDHYGLTQCVVQPDNAHFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R E V+ I G V++RS ET N ++ TG IE+    +E+ S A+ELPLPVFGE +Y
Sbjct: 61  TLERIRVESVVSITGNVVARSEETANESLDTGAIEVVISDLEVQSAADELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR K+R+LDLRR+TLHKNI+ R+ +I S+R RM A+NF E  TPILTASSPEGARDF
Sbjct: 121 PEEIRLKHRYLDLRRETLHKNIMLRSNVITSLRERMKAQNFTEYQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++   FYALPQAPQQ+KQL+M SGFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRMHPNKFYALPQAPQQFKQLMMVSGFDRYFQIAPCFRDEDLRADRSL-EFYQLDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT-VSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           MSFV Q+D+  ++E V+ GVFEEFS   T     F RI Y +A+ +YG+DKPDLRNPI +
Sbjct: 240 MSFVTQEDVFASIEPVMHGVFEEFSGDKTVTPAPFPRIPYLEAMAKYGSDKPDLRNPIEL 299

Query: 300 HNVTEHFVH---SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG-QPG 355
            +VTE FV    + F +F+KI++          P      +R F D M++WA+ +   PG
Sbjct: 300 GDVTEFFVDDSKTGFGIFAKIIAGGGKVIAIPAPKAAAEKSRKFFDEMDKWAKKEMQAPG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y   +  + G +    PV K+    +  A+  +L ++ GD  FF AG        A  
Sbjct: 360 LGYARLKEADGGGIDSQDPVLKNFEPAHLAAMLEQLGLEAGDGIFFSAGKKTDAYKLAGA 419

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL- 474
           AR  + +EL I+  + F+FCWI+DFP YEW+E+ KK+DF+HNPF+MPQGG+E L+  D  
Sbjct: 420 ARLKVGEELDIVEKDIFKFCWIVDFPMYEWDEDNKKVDFSHNPFSMPQGGLEVLEAADTD 479

Query: 475 ---LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
              L I A+QYD+VCNG E++SG IRNH  ++M++AF   G   EVVE  FGG+  AF+ 
Sbjct: 480 EKKLEILAYQYDIVCNGTELSSGAIRNHRPDIMIKAFELAGYGPEVVEEEFGGMLNAFRY 539

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA GIDR+VMLL  A N+R+V +FPM+Q   DLL+G+PS     QLREL LR+
Sbjct: 540 GAPPHGGIAPGIDRMVMLLAEADNIRDVIMFPMNQQGQDLLLGAPSVAENSQLRELSLRL 599

Query: 592 VENPKK 597
           V    K
Sbjct: 600 VPVENK 605


>gi|312912895|dbj|BAJ36869.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
          Length = 590

 Score =  637 bits (1643), Expect = e-180,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 331/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + +NA++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDTKNVNADMATGEIEVLASSLTIINRADS--LPLDANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L     EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADNNKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  YD
Sbjct: 417 LSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEGAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  ++  L ELG+++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANLAALTELGIQVVKKAE 588


>gi|332981513|ref|YP_004462954.1| aspartyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699191|gb|AEE96132.1| aspartyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 595

 Score =  637 bits (1643), Expect = e-180,   Method: Composition-based stats.
 Identities = 236/593 (39%), Positives = 355/593 (59%), Gaps = 9/593 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RTH CG L +SDV +   + GWV R R  GG+IF+D+RD  GI QVV N   D+  F+ 
Sbjct: 9   KRTHMCGQLRLSDVDTSAVVMGWVQRRRDLGGVIFIDLRDRTGIVQVVFNEIFDADAFDK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++R+E+V+ + G V+ RS +T+N  I TG+IE+ A+++++L  +E  P PV  +    
Sbjct: 69  AQALRNEYVIAVVGDVVRRSEDTVNPKINTGEIEIRARQLKVLGRSETPPFPVEDDINVS 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  + +N++ R ++    R  +  E FIE  TP+LT S+PEGARD+L
Sbjct: 129 EILRLKYRYLDLRRPDMQRNLMLRHKVSKITRDFLSDEGFIEVETPMLTKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ GSFYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EM
Sbjct: 189 VPSRLHPGSFYALPQSPQLFKQLLMISGFDKYFQIARCFRDEDLRADRQP-EFTQIDLEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ +D++   E ++  +F++    +  S    R+ Y +A+ RYG+DKPD R  + + +
Sbjct: 248 SFVDVEDVIALNEQLIARIFKDAIGMDI-SLPLKRLTYKEAMERYGSDKPDTRFGLELKD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    S+F+VF+  ++         +        R   D + ++ ++ G  GLA+I  
Sbjct: 307 ISDIVRSSQFKVFADAVAHGGSVRGINVIDGADKFARRELDALVDFVKTFGAKGLAWITI 366

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             DE        P+ K L+    + I  R+D + GD   F+A             R  + 
Sbjct: 367 TADE-----LKSPITKFLSQDEIDGILGRMDAKAGDLLLFVADKDEVVFDSLGQLRLELG 421

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L +I+ + ++  W+ +FP  E++EEEK+    H+PFT P     SL  ++    +A  
Sbjct: 422 KRLNLIDDSRYDLLWVTEFPLLEYSEEEKRYVAKHHPFTSPMDEDISLLNSEPWKARAKA 481

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H +E+  + F  +G SKE    RFG L +AF+ G PPHGG+A 
Sbjct: 482 YDMVLNGNEIGGGSIRIHSTELQQKMFEVLGFSKEDAWERFGFLLKAFEYGAPPHGGMAY 541

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR+VMLL G   +R+V  FP  QN    L  +P+ V  +QLREL +R+ + 
Sbjct: 542 GLDRLVMLLAGLDTIRDVIAFPKVQNASCPLTEAPTPVDEKQLRELHIRVRQQ 594


>gi|217969591|ref|YP_002354825.1| aspartyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217506918|gb|ACK53929.1| aspartyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 599

 Score =  637 bits (1643), Expect = e-180,   Method: Composition-based stats.
 Identities = 230/600 (38%), Positives = 343/600 (57%), Gaps = 6/600 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG +  +D+   V + GWVHR R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 2   RTHYCGKVTAADLDQIVTICGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+VL + G V  R A T NAN+++G+IE+    IE+L+ A   P  +  E    E+
Sbjct: 62  SVRNEFVLKLSGKVRRRPAGTENANLVSGEIEILCHDIEVLNAAATPPFQLDDENLS-ET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + KN++ R +   + R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPQMQKNLMLRYKTTMAFRRFLDGAGFIDVETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +G+DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGQFFALPQSPQLFKQLLMVAGYDRYYQIVKCFRDEDLRADRQP-EFTQVDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I   +E ++R VF+E      +   F R+ Y +A+RRYG+DKPDLR  + + +VT
Sbjct: 240 MNEHEITALVEEMIRYVFKEAMAVE-LPAPFPRMTYAEAMRRYGSDKPDLRVTLELTDVT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR- 362
           +      F+VFS   +         +P  G    R   D   ++    G  GLAYI    
Sbjct: 299 DAVQDVAFKVFSGPATSGGRVAAMRVP-GGNSLTRGEIDEYTKFVAIYGARGLAYIKVND 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + +        P+ K+L+      I  R   Q GD  FF A             R  +  
Sbjct: 358 VTQPNEHGLQSPIVKNLHETALRTILERTGAQSGDLIFFGADKTKVVNDAMGALRIKLGH 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E G +    +   W++DFP +E++E++K+    H+PFT P+     L  ++     A  Y
Sbjct: 418 EKGYVTGEAWRPLWVVDFPMFEYDEDDKRWTACHHPFTSPKDEHIDLLESNPGECLAKAY 477

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL  NG+EI  G +R H ++V  + F  + I  E  + +FG L  A + G PPHGG+A G
Sbjct: 478 DLALNGWEIGGGSVRIHRADVQARVFEALNIGPEEQQAKFGFLLDALKYGAPPHGGLAFG 537

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           +DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+ +  +  +++ 
Sbjct: 538 LDRIVTMMTGAESIRDVIAFPKTQRAQCLLTDAPSGVDEKQLRELHIRLRQKVETQVEVE 597


>gi|238754857|ref|ZP_04616207.1| Aspartyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238706868|gb|EEP99235.1| Aspartyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 598

 Score =  637 bits (1642), Expect = e-180,   Method: Composition-based stats.
 Identities = 218/592 (36%), Positives = 329/592 (55%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    +E A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDRDGIVQVFFDPDHKAAYEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQIIGTVRARPESQINKDMSTGEVEIFAHSLNIINRSEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++     +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMERMVRQLWQTTKGVD--LGDFPIMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF+   +   G         G    R   D   ++    G  GLA++    
Sbjct: 297 DLVRDVEFKVFAGPANDPNGRVAAIRVPGGAQITRKQIDEYGQFVGIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    EAI  R     GD  FF A             R  + ++
Sbjct: 357 RAAGLEGVQSPIAKFLSAEVLEAILARTQAASGDILFFGADSVKIVTDAMGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           + +     ++  W++DFP +E ++ +  +   H+PFT P+         +  S  A  YD
Sbjct: 417 MDLTKLGTWQPLWVVDFPMFE-DDSDGGLTAMHHPFTAPKDMSPEELAANPTSAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+  Q F  +GI++     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V   
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVVAKK 587


>gi|226329879|ref|ZP_03805397.1| hypothetical protein PROPEN_03792 [Proteus penneri ATCC 35198]
 gi|225200674|gb|EEG83028.1| hypothetical protein PROPEN_03792 [Proteus penneri ATCC 35198]
          Length = 594

 Score =  637 bits (1642), Expect = e-180,   Method: Composition-based stats.
 Identities = 216/592 (36%), Positives = 328/592 (55%), Gaps = 6/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L  + VG  V L GWV+R R  GG+IF+D+RD  GI QV  +P+    F  A 
Sbjct: 2   RTNYCGQLNSAHVGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPEQKEAFSQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R    +N N+ TG+IEL+A+ + I + +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQVTGTVRARPDSQVNKNMATGEIELAAESLSIFNRSEP--LPLDSNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  YR+LDLRR  +   +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 RRLTYRYLDLRRPEMSDRLKTRAKITSFVRRFMDGEGFLDVETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++  ++ +  N +     F  + + +A+RRYG+DKPDLRNP+ + ++ 
Sbjct: 239 MSADQVREVMERMIHALWLDILNVD--LGAFPVMTFAEAMRRYGSDKPDLRNPMELKDIA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF++  +      +      G    R   D   ++    G  GLA++    
Sbjct: 297 DLVKDVEFSVFAQAANDEKCRVIALRVPGGASLTRKNIDEYTQFVSIYGAKGLAWMKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+AK L      AI       DGD  FF AG            R  + ++
Sbjct: 357 SAKGIEGVQSPIAKFLTNDVVNAILETTGATDGDLIFFGAGRKGTMSDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + N ++  W++DFP +E +EE   +   H+PFT P+    +      +   A  YD
Sbjct: 417 LELTDLNAWKPLWVIDFPMFEEDEETGSLSAMHHPFTSPKDLSPAELTAHPVGAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+    + +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIHRNEMQQAVFGILGITPNEQQEKFGFLLEALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     L+  +PS  + + L+EL + + +  
Sbjct: 537 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTNAPSFANEDALKELAIAVTQKE 588


>gi|238018959|ref|ZP_04599385.1| hypothetical protein VEIDISOL_00819 [Veillonella dispar ATCC 17748]
 gi|237864443|gb|EEP65733.1| hypothetical protein VEIDISOL_00819 [Veillonella dispar ATCC 17748]
          Length = 605

 Score =  637 bits (1642), Expect = e-180,   Method: Composition-based stats.
 Identities = 234/600 (39%), Positives = 360/600 (60%), Gaps = 11/600 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61
           +RTH CG +   +VG  V L GWV R R HGG+IFLD+RD  G+ QVVA+PD     F  
Sbjct: 12  HRTHGCGTISEQEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGVVQVVASPDHNVESFHK 71

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VLC+ G +  R    IN N+ TG  E+  +++ +L+ A+  P  +  + +  
Sbjct: 72  AEDVRNEYVLCVRGKITKRDEAAINPNLPTGAYEMFCEELRVLNSAKTPPFYIQDDIDVD 131

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + +N++ R ++  +MR    + +F+E  TP+LT S+PEGARD+L
Sbjct: 132 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 191

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 192 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDLEM 250

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++DI + +E ++  VF+         +   RI +D+A+ +YG+DKPDLR  +   +
Sbjct: 251 SFVDEEDIYSMLEEMIAHVFKTTLGKEIPLSM-PRITWDEAMDKYGSDKPDLRFDMAFTD 309

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VT+    +EF+VF  ++      +   +P    G  R   D + E+    G  GLA+  +
Sbjct: 310 VTDLVKDTEFKVFRSVIDNGGVVKGIVVP-GDAGIPRRELDDLVEYVNRYGAKGLAWACF 368

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D     +    + K L       I  ++  + GD    IA  P        + R  +A
Sbjct: 369 NEDG----SIKSQIMKFLGEDTIRNIGEKMGAKGGDLVLMIADKPATVARALGELRLEMA 424

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + + +I+ +   F W+ DFP +E+NE+EK+    H+PFTMP+        +D  S+KA  
Sbjct: 425 RRMNMIDQDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHEDLDKLESDPGSVKAIA 484

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R + S+V  + F  +G+S+E  +++FG +  AFQ G PPH G A 
Sbjct: 485 YDMVLNGVEIGGGSLRIYQSDVQEKVFKAIGLSEEEAKSKFGFMLDAFQYGAPPHAGCAF 544

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR--IVENPKKIL 599
           G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QL+EL ++  I E  ++ L
Sbjct: 545 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIKPDIEEEEEQSL 604


>gi|257095694|ref|YP_003169335.1| aspartyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257048218|gb|ACV37406.1| aspartyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 600

 Score =  637 bits (1642), Expect = e-180,   Method: Composition-based stats.
 Identities = 235/600 (39%), Positives = 343/600 (57%), Gaps = 5/600 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG +    +G  V L GW HR R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 2   RTHYCGQVSARIIGQEVTLCGWAHRRRDHGGVIFVDLRDREGLAQVVCDPDRPLMFKTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVRSE+ L I G V +R   T+NANI +G++E+   ++EIL+ +   P  +  E    E+
Sbjct: 62  SVRSEFCLRIRGKVRARPEGTVNANIASGEVEILCHEMEILNPSLTPPFQLDDENLS-EN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR  +R LDLRR  + +N+  R +   + R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 IRLLHRVLDLRRPQMQQNMQLRYKTARAFRRFLDDAGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I+  ME ++R VF E      +   F R+ Y +A+ RYG+DKPDLR  + + +VT
Sbjct: 240 MGEDEIIELMEELIRVVFREAIGST-LPKPFPRLPYGEAMDRYGSDKPDLRVTLELVDVT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +      F+VF+ + +   G         G    R   D   ++    G  GLAYI    
Sbjct: 299 DALKDVSFKVFASVANSQGGRIAALRIPGGASLTRGEIDAYTQFVGIYGAKGLAYIKVND 358

Query: 364 -DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             +        P+ K+L+  + + I  R   Q GD  FF A             R  I  
Sbjct: 359 ATQLNENGLQSPIVKNLHPASLQTIVGRTGAQSGDLIFFGADKRKVVNDALGALRVKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E G +N + +E  W++DFP ++++EE ++    H+PFT P+         D  S  A  Y
Sbjct: 419 EKGFLNGHAWEPVWVVDFPMFDYDEEARRWTACHHPFTSPKDEHLPRLETDPGSCLAKAY 478

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL  NG E+  G +R H + V  + F  +GI +E  + +FG L  A + G PPHGG+A G
Sbjct: 479 DLALNGSELGGGSVRIHQAAVQEKVFKALGIGEEEAQQKFGFLLDALKYGAPPHGGLAFG 538

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           +DRIV +L GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+ +  +  +++ 
Sbjct: 539 LDRIVTMLAGAESIRDVIAFPKTQRAQCLLTDAPSGVDDKQLRELHIRLRQKVETQVEVD 598


>gi|88800176|ref|ZP_01115744.1| aspartyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88777022|gb|EAR08229.1| aspartyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 590

 Score =  637 bits (1642), Expect = e-180,   Method: Composition-based stats.
 Identities = 232/591 (39%), Positives = 344/591 (58%), Gaps = 7/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+  CG+L  S +   V + GWVHR R HGG+IFLD+RD  G+ QVV +PD+   FEIA 
Sbjct: 2   RSQYCGELDSSFIDQTVTICGWVHRRRDHGGVIFLDVRDREGVMQVVFDPDAADSFEIAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R   T+N+N+ TG++EL  ++I++L+ A   P P+       E 
Sbjct: 62  RVRSEYVIQVTGRVRARPEGTVNSNMRTGEVELLGKEIQVLNKAATPPFPLDEYSGVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR++DLRR  + + ++ R++I +S+R  +  + FI+  TPIL  ++PEGARD+LVP
Sbjct: 122 VRLKYRYMDLRRPEMQQKLILRSKITSSIRRSLEDQGFIDIETPILNRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF++LPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHPGSFFSLPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDLETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ I+   E ++R +F+E  N       F R+ + +A+ R+G+DKPDLR P+ +  V 
Sbjct: 241 MDEEGIMAITETMIRDIFKEVLNVEFDD--FERMPFSEAMERFGSDKPDLRIPLELVTVG 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS       G         G    R   D   ++    G  GLAYI    
Sbjct: 299 DLMTEVEFKVFSGPAKDPKGRVAALKVPGGNSLTRKQIDDYTKYVSIFGAKGLAYIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
                     P+ K L     +++  RLD QDGD  FF A             R  I ++
Sbjct: 359 KTDLEEGLQSPIVKFLPTDVRQSLLERLDAQDGDLIFFGADKASVVNDALGALRCKIGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           + +     +   W++DFP +E +  + ++   H+PFTMP   +E LK N   +  +  YD
Sbjct: 419 MNLYTKE-WAPLWVVDFPMFE-DNGDVRLTALHHPFTMPSCSIEELKAN-PAAALSKAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  + I KE  E +FG L  A + G PPHGG+A G+
Sbjct: 476 MVLNGMELGGGSIRIHQEEMQNAVFDVLKIDKEEQEEKFGFLLSALRYGAPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR+VML+ G+ ++REV  FP +Q    ++  +P  V  EQL+EL +R+ + 
Sbjct: 536 DRLVMLMTGSDSIREVIAFPKTQTAACVMTHAPGQVEPEQLKELNIRVRKP 586


>gi|330964821|gb|EGH65081.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 591

 Score =  637 bits (1642), Expect = e-180,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 344/593 (58%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G              R+  D    +    G  GLAYI    
Sbjct: 300 DQLNAVEFKVFSGPANDPKGRVAALRVPGAASMARSQIDDYTRFVSIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +   N   I  R+   DGD  FF A             R  I  +
Sbjct: 360 RAKGAEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGADKFKVVSEALGALRIKIGND 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +  C  +   W++DFP +E N++       H+PFT P+   E L+ N   +  +  YD
Sbjct: 420 LKLHTCE-WAPMWVVDFPMFEENDD-GSFSALHHPFTAPKCTPEELEAN-PATALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 537 DRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 589


>gi|255262607|ref|ZP_05341949.1| aspartyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255104942|gb|EET47616.1| aspartyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 617

 Score =  637 bits (1642), Expect = e-180,   Method: Composition-based stats.
 Identities = 336/618 (54%), Positives = 427/618 (69%), Gaps = 27/618 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL  ++VG  VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+PDS  F 
Sbjct: 1   MHAYRSHTCADLTKANVGDTVRLSGWVHRVRDHGGLLFIDLRDHYGITQVMADPDSPVFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG VM+R    +N  I TG++E+  + IE+L  A ELPL VFGE+EY
Sbjct: 61  EIEKVRSEWCIRIDGNVMARDESLVNPKIPTGEVEVFIRDIEVLGAANELPLMVFGEQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYR+LDLRR+ L  N+  R+ ++ SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLKYRYLDLRREKLQNNMKMRSDVVASMRKRMWDKGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SG+D+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ V++GVFEEF  G  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVIQGVFEEFGGGKKVDATWEQISYRDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L      E+ AIPA  GG +R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSEHFRGSGFAIFAKLLENEGT-EIRAIPAPTGG-SRKFCDRMNAFAQKEGLPGMGYIF 358

Query: 361 WR--------------------LDESGNVAG----MGPVAKHLNIVNTEAIRVRLDMQDG 396
           WR                      ++G +       GP+AK++     EAIRV L + +G
Sbjct: 359 WRTQTADAIAQETGMTVKEVNAKIKAGEIEVAMEAAGPLAKNIGPERAEAIRVELGLDNG 418

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+ FF+ G P  F +FA  AR+ I   LG+ + N + F WI+DFP YE +EE  KIDF H
Sbjct: 419 DAAFFLGGKPAAFEAFAGRARSEIGDTLGLTDTNRYAFAWIVDFPIYERDEETGKIDFEH 478

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           NPF+MPQGGM +L G D   +  +QYDL CNG+E+ SG IRNH  E+M +AF   G  K+
Sbjct: 479 NPFSMPQGGMAALDG-DPEDVLGYQYDLACNGYELVSGAIRNHRPEIMFKAFEIAGYGKD 537

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
            VE RFGG+  AFQ G PPHGG AAGIDRIVMLL    N+REV +FPM+Q   DL+MG+P
Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGIDRIVMLLAEEANIREVIMFPMNQRAEDLMMGAP 597

Query: 577 STVSVEQLRELGLRIVEN 594
           +    EQLREL LR++  
Sbjct: 598 NDPMNEQLRELNLRVIPQ 615


>gi|146306300|ref|YP_001186765.1| aspartyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166225377|sp|A4XRR7|SYD_PSEMY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145574501|gb|ABP84033.1| aspartate--tRNA(Asn) ligase [Pseudomonas mendocina ymp]
          Length = 591

 Score =  636 bits (1641), Expect = e-180,   Method: Composition-based stats.
 Identities = 230/593 (38%), Positives = 339/593 (57%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLDGQEITLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRAETFAKAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R A  +N N+ +G IE+   ++++L+ AE  P P+    +  E 
Sbjct: 63  RVRSEYVVKITGKVRLRPAGAVNPNMASGAIEVLGYELDVLNEAETPPFPLNEYTDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI +S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLKLRSRITSSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI++  E ++R +F+E             +   +A+RR+G+DKPDLR P+ + +V 
Sbjct: 242 LDEKDIMDITETMVRNLFKEVLGVEFGEL--PHMPLAEAMRRFGSDKPDLRIPLELVDVE 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF+   +             G    R   D   ++    G  GLAYI    
Sbjct: 300 DQLKDVEFKVFAGPANDPKCRVTALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K++ + N   I  R+   DGD  FF A             R  +  +
Sbjct: 360 RAAGVDGLQSPIVKNIPLDNINVILDRVGAVDGDIVFFGADKAKIVSEALGALRIKLGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++ C  +   W++DFP +E N++   +   H+PFT P+   E L+ N   +  +  YD
Sbjct: 420 LNLLTCE-WAPLWVVDFPMFEENDD-GSLTAMHHPFTSPKCTPEDLEAN-PAAALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H   +    F  +GIS++  + +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHDKAMQQTVFRVLGISEDEQQEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA ++REV  FP +Q+   ++  +P  V  + LREL +R+ E  K
Sbjct: 537 DRLVMLMTGASSIREVIAFPKTQSAACVMTQAPGVVDAKSLRELHIRLREQAK 589


>gi|197263101|ref|ZP_03163175.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197241356|gb|EDY23976.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
          Length = 590

 Score =  636 bits (1641), Expect = e-180,   Method: Composition-based stats.
 Identities = 221/593 (37%), Positives = 331/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADS--LPLDANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L     + I  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLDGINSPVAKFLTADIVDVILERTGAQDGDMIFFGADNKKVVADALGALRVKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E ++ E  +   H+PFT P+    S          A  YD
Sbjct: 417 LSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  ++  L ELG+++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANLAALTELGIQVVKKAE 588


>gi|16079809|ref|NP_390633.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310693|ref|ZP_03592540.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221315017|ref|ZP_03596822.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221319938|ref|ZP_03601232.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324219|ref|ZP_03605513.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|3122885|sp|O32038|SYD_BACSU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2635219|emb|CAB14714.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 592

 Score =  636 bits (1641), Expect = e-180,   Method: Composition-based stats.
 Identities = 232/595 (38%), Positives = 341/595 (57%), Gaps = 10/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+ CGD+    +G  V L GWV + R  GG+IF+D+RD  GI QVV NPD       IA
Sbjct: 4   RTYYCGDITEKAIGESVTLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKEALAIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP 121
           + +R+E+VL I G V++R   T+N N+ TG IE+ A  + +L+ A+  P  +  +  E  
Sbjct: 64  EGIRNEYVLDIQGKVVAREEGTVNPNLKTGAIEIHADGVNVLNAAKTPPFAISDQAEEVS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R K+R+LDLRR  + + +  R  +  ++R  +    F++  TPILT S+PEGARD+L
Sbjct: 124 EDVRLKHRYLDLRRPAMFQTMQLRHNVTKAVRSFLDENGFLDIETPILTGSTPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMVSGIERYYQIARCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI++  E ++  V  E      +     R+ YD+A+ +YG+DKPD R  +++ +
Sbjct: 243 SFMSQEDIMSLAEEMMAKVMRETKGEE-LQLPLPRMTYDEAMNKYGSDKPDTRFDMLLTD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V++    +EF+VFS  ++     +   +    G  +R   D +  +A + G  GLA++  
Sbjct: 302 VSDIVKDTEFKVFSSAVANGGVVKAINVKGGAGDYSRKDIDALGAFAANYGAKGLAWVKV 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK  +      +   LD  +GD   F A       +     R  + 
Sbjct: 362 EAD-----GVKGPIAKFFDEEKQSKLIEALDAAEGDLLLFGADQFEVVAASLGALRLKLG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +E G+I+   F F W++D+P  E + EE +   AH+PFTMP      L       +KA  
Sbjct: 417 KERGLIDEKLFNFLWVIDWPLLEHDPEEGRFYAAHHPFTMPVREDLELIETAPEDMKAQA 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+  G IR    ++  + F+ +G S E    +FG L  AF+ G PPHGGIA 
Sbjct: 477 YDLVLNGYELGGGSIRIFEKDIQEKMFALLGFSPEEAAEQFGFLLEAFEYGAPPHGGIAL 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VMLL G  N+R+   FP + +   L+  +P  VS  QL EL L I +  K
Sbjct: 537 GLDRLVMLLAGRTNLRDTIAFPKTASASCLMTEAPGEVSDAQLDELHLSIKKKVK 591


>gi|290968831|ref|ZP_06560368.1| aspartate--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781127|gb|EFD93718.1| aspartate--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 597

 Score =  636 bits (1641), Expect = e-180,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 348/593 (58%), Gaps = 9/593 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           +RT  C ++G +D G  V L GWV R R HGG+IF+D+RD  GI QVVA PD  +A F+ 
Sbjct: 8   HRTQYCAEVGEADQGKEVVLCGWVERRRDHGGLIFIDLRDRTGIVQVVAAPDYETASFQK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VL + G V  R AET+N  + TG IE+   ++ IL+ ++  P  +    +  
Sbjct: 68  AEQVRTEYVLVVRGTVRMRDAETVNPKMKTGTIEVRCNELRILNSSKTPPFYIEDNIDVD 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR KYR+LDLRR  +  N++ R  + ++MR  +    FI+  TP L  S+PEGARD+L
Sbjct: 128 EKIRLKYRYLDLRRPEMQHNLIMRHHVKHAMRSFLNTHGFIDIETPELCKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLDMEM
Sbjct: 188 VPSRVNEGKFYALPQSPQIFKQLLMISGMDRYYQIARCFRDEDLRADRQP-EFTQLDMEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++Q+DIL+  E +++ +F+E      +     R+ +D A+  YG+DKPDLR  +   +
Sbjct: 247 SFMDQEDILSLTEEMMQYIFKETLGYE-LPLPIQRMTWDYAMENYGSDKPDLRFDMKFTD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VTE    ++F+VF  ++      +   +        R   D + E+    G  GLA+I +
Sbjct: 306 VTELVKDTDFKVFRSVIDNGGRVKAINVK-GDADIPRRELDGLVEYVSHYGAKGLAWIGF 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                GN+     + K         I      + GD    IA  P    +   + R  +A
Sbjct: 365 --TADGNLKSQ--IKKFFGEEKLREIGAACGAETGDLILMIADKPAVVAAALGELRKEMA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + + +I+ N F F W++DFP +E++EEEK+    H+PFT  +         D   + A  
Sbjct: 421 RRMHLIDENQFAFTWVVDFPMFEYSEEEKRYVAMHHPFTAMREEDLDKLETDPGHVYAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G +R +  ++  + F  +G++ E  E +FG L RAF+ G PPHGG+A 
Sbjct: 481 YDLVLNGIELGGGSLRIYQPDIQQRVFKAIGLTPEEAEQKFGFLMRAFEYGAPPHGGLAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR++ML+L  K++R+V  FP +QN  D +  +PS V+ +QL EL ++  E 
Sbjct: 541 GLDRMIMLMLKRKSIRDVIAFPKTQNAIDPMSEAPSVVTRKQLHELHIQTEEE 593


>gi|260428921|ref|ZP_05782898.1| aspartyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260419544|gb|EEX12797.1| aspartyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 628

 Score =  636 bits (1641), Expect = e-180,   Method: Composition-based stats.
 Identities = 331/631 (52%), Positives = 433/631 (68%), Gaps = 39/631 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C DL   +VG  VRLSGWVHR+R HGGI+F+D+RDHYGITQV+ +PDS  F 
Sbjct: 1   MHAYRTHTCADLKKENVGDTVRLSGWVHRIRDHGGILFIDLRDHYGITQVLCDPDSPAFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R    +N  + TG+IE+  +++E+L  A+ELPL VFG++EY
Sbjct: 61  DVEKVRSEWCIRIDGTVKARDESLVNPKLPTGEIEVFVRELEVLGAAKELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +++  R+ ++ SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREEMQRSMTLRSDVVASMRRRMWDKGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQL+M SG+D+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q D+ +T+  V+ GVFEEF  G +V +   + +I Y +A  +YGTDKPDLRNPI 
Sbjct: 241 MSFVTQQDVFDTVSPVIAGVFEEFGGGASVDDPASWPQIPYKEAALKYGTDKPDLRNPIE 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M +V+EHF  S F +F+++L  +   E+ AIPA+ GG +R FCDRMN +A+ +G PG+ Y
Sbjct: 301 MQDVSEHFRGSGFAIFARLLEQDGT-EIRAIPARTGG-SRKFCDRMNVFAQKEGLPGMGY 358

Query: 359 IFWRLDES--------------------GNVAGM--------------GPVAKHLNIVNT 384
           IFWR  ++                    GN                  GP+AK++    T
Sbjct: 359 IFWRKSDNSVSDEKIARLEREMRQFLKMGNTEEFQKRFDEWASYCEAAGPLAKNIGPERT 418

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYE 444
           EAIR +L +  GD+ FF+ G    F   A  AR+ I +ELG+   N F F WI+DFP YE
Sbjct: 419 EAIRRQLGLGVGDAAFFLGGKAASFQRVAGKARDVIGEELGLTEKNRFAFAWIVDFPIYE 478

Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
            +EE   IDF HNPF+MPQGGME+L+G D L++K FQYDL CNG+E+ SG IRNH  +VM
Sbjct: 479 KDEETGAIDFEHNPFSMPQGGMEALEG-DPLAVKGFQYDLACNGYELVSGAIRNHKPDVM 537

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           L+AF   G  ++ V+ RF GLY AFQ G PPHGG AAGIDRIVMLL G  N+REV +FPM
Sbjct: 538 LKAFELAGYGEDEVKKRFAGLYTAFQYGAPPHGGCAAGIDRIVMLLAGTSNIREVIMFPM 597

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           +Q   DL+M +PS  + +QL EL LR++   
Sbjct: 598 NQRAEDLMMQAPSEPTSDQLMELSLRVIPQE 628


>gi|254428816|ref|ZP_05042523.1| aspartyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196194985|gb|EDX89944.1| aspartyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 587

 Score =  636 bits (1641), Expect = e-180,   Method: Composition-based stats.
 Identities = 229/592 (38%), Positives = 338/592 (57%), Gaps = 8/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CGDL  S  G  V L GWV R R HGG+IFLD+RD  G+ QVV +PD+   F +A 
Sbjct: 2   RSHYCGDLRASHDGETVELCGWVSRRRDHGGVIFLDLRDRNGLVQVVFDPDTVEAFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V  R     N+ + TG IE+  +++ IL+ AE  P  +       E 
Sbjct: 62  KVRSEYVVRLSGRVRMRDEAVRNSKMSTGDIEVLGKELTILNEAETPPFELDAHSAAGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR++DLRR  + +N   R+R+ + +R  +  E F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKYRYMDLRRPEVLRNFQFRSRLTHVVRAFLEGEGFMDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDLEASF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE++DI+   E ++R VF+E  +       F R+ + +A++R+G+DKPDLR P+ + ++ 
Sbjct: 241 VEEEDIMGITERMVRSVFKELLDVELPD--FPRMPFSEAMQRFGSDKPDLRIPLELIDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G   +R   D   ++    G  GLAYI    
Sbjct: 299 DLLAGVDFKVFSGPANDPKGRVAAMRVPGGCSLSRKDIDGYTKFVSIYGAKGLAYIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K L     + I  R   + GD  FF A             R  +  +
Sbjct: 359 LAAGAEGLQSPILKFLTEDAIKGILERTGAETGDLIFFGADKAKIVNEALGALRVKVGHD 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++    +   W++DFP +E  E+E +    H+PFTMP    E LK ++     +  YD
Sbjct: 419 LNLV-EGEWAPLWVVDFPMFE--EDEGQYHALHHPFTMPSCSAEELK-SNPAEALSRAYD 474

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H   +    F  +GIS E  + +FG L    + G PPHGG+A G+
Sbjct: 475 MVLNGTELGGGSIRIHNPAMQRTVFEALGISDEEADEKFGFLLDGLKYGAPPHGGLAFGL 534

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VML+ G +++R+V  FP +Q     +  +PS V  +QLRE+G+++ +  
Sbjct: 535 DRMVMLMTGCESIRDVIAFPKTQTAACTMTNAPSPVDNKQLREVGVQVRKEE 586


>gi|269798267|ref|YP_003312167.1| aspartyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094896|gb|ACZ24887.1| aspartyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 601

 Score =  636 bits (1641), Expect = e-180,   Method: Composition-based stats.
 Identities = 231/596 (38%), Positives = 354/596 (59%), Gaps = 9/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61
           +RTH CG +   +VG  V L GWV R R HGG+IFLD+RD  G+ QVVA+PD     F  
Sbjct: 8   HRTHGCGTISEQEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGVVQVVASPDHNVESFHK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VLC+ G +  R    IN N+ TG  E+  +++ +L+ A+  P  +  + +  
Sbjct: 68  AEDVRNEYVLCVRGTITKRDDSAINPNLPTGAYEMFCEELRVLNSAKTPPFYIQDDIDVD 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + +N++ R ++  +MR    + +F+E  TP+LT S+PEGARD+L
Sbjct: 128 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 188 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDLEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++DI   +E ++  VF+        S    RI +D+A+ +YG+DKPDLR  +   +
Sbjct: 247 SFVDEEDIYALLEEMIAHVFKTALGKEI-SLPMPRITWDEAMDKYGSDKPDLRFDMAFTD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VT+    +EF+VF  ++      +   +P    G  R   D + E+    G  GLA+  +
Sbjct: 306 VTDLVKDTEFKVFRSVIDNGGVVKGIVVP-GDAGIPRRELDDLVEYVNRYGAKGLAWACF 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D     +    + K L       I  ++  + GD    IA  P        + R  +A
Sbjct: 365 NEDG----SIKSQIMKFLGEDTIRNIGEKMGAKGGDLVLMIADKPATVARALGELRLEMA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + + +I+ +   F W+ DFP +E+NE+EK+    H+PFTMP+        +D  S+KA  
Sbjct: 421 RRMNMIDQDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHADLDKLESDPGSVKAIA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R + ++V  + F  +G+S E   ++FG +  AFQ G PPH G A 
Sbjct: 481 YDMVLNGVEIGGGSLRIYQADVQEKVFKAIGLSIEEARSKFGFMLDAFQYGAPPHAGCAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QL+EL ++     ++
Sbjct: 541 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIKPDVEEEQ 596


>gi|75764435|ref|ZP_00743935.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74488076|gb|EAO51792.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 580

 Score =  636 bits (1641), Expect = e-180,   Method: Composition-based stats.
 Identities = 229/584 (39%), Positives = 338/584 (57%), Gaps = 9/584 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMTTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  QL +
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQLED 580


>gi|118580744|ref|YP_901994.1| aspartyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118503454|gb|ABK99936.1| aspartyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 594

 Score =  636 bits (1641), Expect = e-180,   Method: Composition-based stats.
 Identities = 247/594 (41%), Positives = 354/594 (59%), Gaps = 12/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG+L    +G  V L GW  R R HGG+IF+D+RD  GI QVV +P+       I
Sbjct: 8   KRTQYCGELTGRHIGQEVILMGWALRRRDHGGLIFIDLRDREGIAQVVFDPEVNGQAHAI 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A++VRSE+VL I G V+ R A T+N N+ TG++E+   + ++LS ++ LP  +    E  
Sbjct: 68  AETVRSEFVLAIKGEVIPRPAGTVNPNMKTGEVEIRVSECKLLSRSKALPFMLDEFSEVN 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR K+R+LDLRR  L +N++ R+++    R  +    F+E  TP LT S+PEGARDFL
Sbjct: 128 ENIRLKHRYLDLRRPQLQQNLILRSKVSQLTRSYLTDNGFLEMETPFLTKSTPEGARDFL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+NQGSFYALPQ+PQ +KQ+LM SGFDRYFQ+  CFRDED R+DR P EF Q+D EM
Sbjct: 188 VPSRINQGSFYALPQSPQIFKQILMISGFDRYFQVVRCFRDEDLRADRQP-EFTQIDCEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++++DI+  ME ++  VF++    + V      I YD+AIRR+G D PDLR  + +  
Sbjct: 247 SFIDREDIIAVMEGLIATVFKQAKGVD-VQLPIQHITYDEAIRRFGVDNPDLRFGMELCQ 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIF 360
           +T+    S F+VF+   +     +   I AKG    +R   D + E+ R  G  GLAY+ 
Sbjct: 306 LTDIVKGSGFKVFADTAAKGGIVK--GINAKGCARFSRKEIDDLTEFVRIYGAKGLAYVK 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              +E        P+AK        A+      ++GD  FF+A  P          RNH+
Sbjct: 364 IENNE-----WRSPIAKFFTPEEIGAMNEAFGAEEGDLLFFVADKPKVVNDSLGKLRNHL 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A  L + + + + F W+ +FP  EW++E+K+    H+PFT P      L  +D    +A 
Sbjct: 419 ASLLKLTSNDDYRFVWVTEFPLLEWDDEDKRWAAVHHPFTAPMDEDLPLLESDPGRCRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG EI  G IR H  +V  + F  +G+S E   ++FG L  A + G PPHGGIA
Sbjct: 479 AYDLVLNGNEIGGGSIRIHQEQVQSRMFELLGMSDESARSKFGFLLDALEFGTPPHGGIA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR++ML+ G++++R+V  FP +Q    L+  +PS V  +QLRELG+R+ E 
Sbjct: 539 FGLDRLIMLMTGSESIRDVIAFPKTQKGACLMSEAPSRVETKQLRELGIRLAEK 592


>gi|167629918|ref|YP_001680417.1| aspartyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|226736542|sp|B0TF89|SYD_HELMI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167592658|gb|ABZ84406.1| aspartyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 605

 Score =  636 bits (1640), Expect = e-180,   Method: Composition-based stats.
 Identities = 238/602 (39%), Positives = 356/602 (59%), Gaps = 13/602 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            R+H  GDL +   G  V L GWV R R HGG+IF+D+RD  G+ QVV +P+     F  
Sbjct: 10  KRSHRGGDLRIDHAGQTVTLMGWVQRRRDHGGLIFVDLRDRSGLVQVVFSPEVGKEAFTK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VL + G V  R   T+NAN+ +GQI++ A+++ +L+ A+  P  +    +  
Sbjct: 70  AEDVRNEYVLAVTGDVRPRPEGTVNANLPSGQIDVYARQLWVLNSAKTPPFYIEDGVDVD 129

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  + +N++ R +   +MR  +    F+E  TP+LT S+PEGAR+F+
Sbjct: 130 ETVRLKYRYLDLRRPEMQRNLIIRHKTAKAMRDFLDRNGFLEIETPMLTKSTPEGAREFM 189

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ G F+ LPQ+PQ YKQ+LM +G +RYFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 190 VPSRIHPGEFFVLPQSPQLYKQILMVAGMERYFQIVRCFRDEDLRADRQP-EFTQLDIEM 248

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF + DD+L  ME ++  +F+E       S  F RI Y +A+ R+G+DKPDLR  + + +
Sbjct: 249 SFTQMDDLLTLMEEMVAHIFKEALGKEI-STPFRRIPYAEAMGRFGSDKPDLRFGLELID 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIF 360
           +TE     EF+VF+ +  V  G EV AI AKG    +R   D + +     G  GLAYI 
Sbjct: 308 LTETVKDVEFKVFASV--VKGGGEVKAINAKGCAHFSRKEIDDLTKGVAVYGAKGLAYIQ 365

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                        P+AK        A+  RL  + GD   F+A  P    +     R  +
Sbjct: 366 MT-----EEGPKSPIAKFFTDEQLNAVLDRLGAEKGDLLLFVADKPSVVAASLGFLRQEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ L +I+    EF W++DFP  E++ EEK+ +  H+PFT P+     L   +   ++A 
Sbjct: 421 ARRLNLIDSEKLEFAWVVDFPLVEYDPEEKRYNAIHHPFTAPKDEDLDLLDKEPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G +R +  ++  + F+ +G++ E    +FG L  AF  G PPHGGIA
Sbjct: 481 AYDLVLNGVELGGGSLRIYRRDIQEKMFAILGLTAEEAYQKFGFLLDAFDYGTPPHGGIA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DR++ML+ G   +R+V  FP +Q+  D+++ +PS V+  QL+EL +++ + P K  K
Sbjct: 541 FGLDRMIMLMTGRDTIRDVIAFPKTQSASDMMVDAPSAVTPRQLKELHIKL-DLPVKAPK 599

Query: 601 IS 602
             
Sbjct: 600 AE 601


>gi|227111612|ref|ZP_03825268.1| aspartyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 598

 Score =  636 bits (1640), Expect = e-180,   Method: Composition-based stats.
 Identities = 224/603 (37%), Positives = 336/603 (55%), Gaps = 7/603 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT+ CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F++A 
Sbjct: 2   RTNYCGQLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQLTGVVRARPESQINKDMATGEVEIFATALTIVNRSE--ALPLDSNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLRR  + + +  R RI + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKFRYLDLRRPEMAQRLKTRARITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++++    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLVRELWQDVKGVD--LGDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G   +R   D   ++    G  GLAYI    
Sbjct: 297 DLVKDIEFKVFSGPANDAKGRVAAIRVPGGAQLSRKQIDEYGKFIEIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L+     A+  R   QDGD  FF A             R  + ++
Sbjct: 357 RAKGLEGVQSPVAKFLSEDVLSAVLDRTAAQDGDILFFGADSAKVVTDALGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   N +E  W++DFP +E +  E  +   H+PFT P+  + S    + +S  A  YD
Sbjct: 417 LSLTKDNSWEPLWVVDFPMFEED-GEGGLAAMHHPFTAPRDMLPSELAANPVSAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    FS +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHSGEMQQTVFSILGITEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISV 603
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V   K       
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLEELAIAVVVKGKAAQDGKS 595

Query: 604 TTI 606
              
Sbjct: 596 ENE 598


>gi|114776360|ref|ZP_01451405.1| aspartyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114553190|gb|EAU55588.1| aspartyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 594

 Score =  636 bits (1640), Expect = e-180,   Method: Composition-based stats.
 Identities = 231/587 (39%), Positives = 340/587 (57%), Gaps = 5/587 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RTH CGD  V  +G  VRL+GW    R HGG++F+D+RD  G+ Q+V +PD     ++A 
Sbjct: 4   RTH-CGDFRVHHIGQTVRLNGWAQTNRDHGGVVFIDVRDRSGLVQIVVHPDDPAVHQLAH 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R + V+ + G V++RS ET+NA + TG IE+ A  I +L+ +E  P  +    +  E 
Sbjct: 63  SLRQQDVIEVVGEVIARSDETVNAKLPTGAIEVKASTITVLNRSETPPFMIDDTCDTGEQ 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  +   +  R R+ ++ R  + +++F+E  TPIL  S+PEGARD+LVP
Sbjct: 123 HRLEYRYLDLRRPKMQGFMALRHRVTHAARNYLDSQSFLEIETPILNKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV  GSF+ALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF Q+D+E+SF
Sbjct: 183 SRVYPGSFFALPQSPQIFKQLLMVAGMDRYYQIARCFRDEDLRADRQP-EFTQVDIELSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V QD+++   E +LR +F+     +     F RI Y DA+ RYG D+PD+R  +   N+T
Sbjct: 242 VSQDEVMAVAEGLLRSMFDAGVGIHLPET-FPRITYADAMDRYGLDRPDVRFGLEHVNIT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E     EF+VF +        ++  +P  G   +R   D   ++    G  GLA+I    
Sbjct: 301 EMMKRVEFKVFREPADNGGLVKIMRVP-GGSALSRKQIDDYTKFVSIYGAKGLAWIKVND 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
                     P+ K L       +      ++GD  FF AGD         + R  +  +
Sbjct: 360 VTDLPGGLQSPIVKFLPEDVLADMLQACGAENGDLLFFGAGDEKVVNDALGNLRVKVGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           +G++      F W++DFP + WN +EK+ +  H+PFT P         +D L++++  YD
Sbjct: 420 MGLVAAGDHRFVWVVDFPMFAWNADEKRPEALHHPFTAPYAEDLDKLESDPLNMRSQAYD 479

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG EI  G IR H  EV  + F  +GIS E  +++FG L  A + G PPHGG+A G+
Sbjct: 480 LVWNGTEIGGGSIRIHNPEVQARVFKTLGISDEEADSKFGFLVNALKYGAPPHGGLAFGL 539

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           DR++ L+ G  ++R+V  FP +Q   D +  +PS VS  Q +ELGLR
Sbjct: 540 DRVLSLMAGVDSIRDVIAFPKTQKAADPMSNAPSEVSDAQWKELGLR 586


>gi|296101795|ref|YP_003611941.1| aspartyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295056254|gb|ADF60992.1| aspartyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 590

 Score =  636 bits (1640), Expect = e-180,   Method: Composition-based stats.
 Identities = 223/594 (37%), Positives = 329/594 (55%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L  S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + +NA++ TG IE+ A  + I++ AE   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNVNADMATGAIEVLASDLTIINRAE--ALPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++R ++ +         +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREVMEALVRSLWNDVKGVE--LGDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLVKSVEFAVFAGPANDPKGRVAALRVPGGAALSRKQIDDYGNFIKIYGAKGLAYIKVTE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGITSPVAKFLNAEIVEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E ++ E  +   H+PFT P+    +          A  YD
Sbjct: 417 LNLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPEEAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHSGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+ +V+  +K
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELGIDVVKKEEK 589


>gi|289578235|ref|YP_003476862.1| aspartyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527948|gb|ADD02300.1| aspartyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 592

 Score =  636 bits (1640), Expect = e-180,   Method: Composition-based stats.
 Identities = 248/590 (42%), Positives = 351/590 (59%), Gaps = 10/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTH CG+L V DV   V + GWV R R HGG++F+D+RD  GI QVV N +  S  FE 
Sbjct: 9   KRTHMCGELTVEDVDKSVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFNNEVSSEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            + VRSE+VL I+G V+ R+ E +N  I TG+IE+ A  ++ILS +E  P P+       
Sbjct: 69  VQGVRSEYVLAIEGKVVKRAPENVNPKIATGEIEIYANTLKILSRSETPPFPIEDRSNVS 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR ++ KN++ R +I   +R  +    FIE  TP+L  S+PEGARD+L
Sbjct: 129 EAIRLKYRYLDLRRPSMQKNLMTRFKITKVVRDFLNKNGFIEIETPLLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EM
Sbjct: 189 VPSRIYPGKFYALPQSPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE DD+L   E ++  +F+E    + V   F R+ Y +A+ R+GTDKPDLR  + + +
Sbjct: 248 SFVEVDDVLEINEKMIAQIFKETLGID-VPIPFKRLSYQEAMERFGTDKPDLRFGMELKD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    SEF VF   L  +       + +      R   D + E A++ G  GL ++  
Sbjct: 307 LSDIVSRSEFNVFKTALKNSGSVRGINVKS-AASMPRRQLDELVELAKTYGAKGLLWMQV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             +E        P  K L+    E I  RL+ + GD    +A             R  + 
Sbjct: 366 FENE-----VKSPATKFLSEKEIEKILERLEAETGDLLLIVADKDEIVFDTLGHLRLELG 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L +I+ N +EF WI+DFP  E++ EEK+    H+PFT P+     L   + L ++A  
Sbjct: 421 KRLNLIDENKYEFVWIVDFPLLEYDSEEKRYVAKHHPFTAPKDEDIDLLEKEPLKVRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H +E+  + F  +G S+E    RFG L  AF+ G PPHGGIA 
Sbjct: 481 YDIVLNGVEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFKYGAPPHGGIAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+ M++ G+  +R+V  FP +QN   L+  +PS VS EQL+EL +++
Sbjct: 541 GLDRLAMIITGSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 590


>gi|313893155|ref|ZP_07826732.1| aspartate--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442508|gb|EFR60923.1| aspartate--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 601

 Score =  636 bits (1640), Expect = e-180,   Method: Composition-based stats.
 Identities = 233/600 (38%), Positives = 359/600 (59%), Gaps = 11/600 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61
           +RTH CG +   +VG  V L GWV R R HGG+IFLD+RD  G+ Q+VA+PD     F  
Sbjct: 8   HRTHGCGTISEQEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGVVQIVASPDHNVESFHK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VLC+ G +  R    IN N+ TG  E+  +++ +L+ A+  P  +  + +  
Sbjct: 68  AEDVRNEYVLCVRGTITKRDDSAINPNLPTGAYEMFCEELRVLNSAKTPPFYIQDDIDVD 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + +N++ R ++  +MR    + +F+E  TP+LT S+PEGARD+L
Sbjct: 128 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQIA CFRDED R+DR P EF QLD+EM
Sbjct: 188 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIARCFRDEDLRADRQP-EFTQLDLEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++DI + +E ++  VF+        +    RI +D+A+ +YG+DKPDLR  +   +
Sbjct: 247 SFVDEEDIYSMLEEMVAHVFKTALGKEI-TLPMPRITWDEAMDKYGSDKPDLRFDMAFTD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VT+    +EF+VF  ++      +   +P    G  R   D + E+    G  GLA+  +
Sbjct: 306 VTDLVKDTEFKVFRSVIDNGGVVKGIVVP-GDAGIPRRELDDLVEYVNRYGAKGLAWACF 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D     +    + K L       I  ++  + GD    IA  P        + R  +A
Sbjct: 365 NEDG----SIKSQIMKFLGEDTIRNIGKKMGAKGGDLVLMIADKPATVARALGELRLEMA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + + +I+ +   F W+ DFP +E+NE+EK+    H+PFTMP+        +D  S+KA  
Sbjct: 421 RRMNMIDPDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHADLDKLESDPGSVKAIA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R + ++V  + F  +G+S E   ++FG +  AFQ G PPH G A 
Sbjct: 481 YDMVLNGVEIGGGSLRIYQADVQEKVFKAIGLSIEEARSKFGFMLDAFQYGAPPHAGCAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR--IVENPKKIL 599
           G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QL+EL ++  I E  ++ L
Sbjct: 541 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIKPDIEEEEEQSL 600


>gi|26248132|ref|NP_754172.1| aspartyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91211091|ref|YP_541077.1| aspartyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110641984|ref|YP_669714.1| aspartyl-tRNA synthetase [Escherichia coli 536]
 gi|117624018|ref|YP_852931.1| aspartyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|191172971|ref|ZP_03034505.1| aspartyl-tRNA synthetase [Escherichia coli F11]
 gi|218558731|ref|YP_002391644.1| aspartyl-tRNA synthetase [Escherichia coli S88]
 gi|218689804|ref|YP_002398016.1| aspartyl-tRNA synthetase [Escherichia coli ED1a]
 gi|227885706|ref|ZP_04003511.1| aspartyl-tRNA synthetase [Escherichia coli 83972]
 gi|237705820|ref|ZP_04536301.1| aspartyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|300982170|ref|ZP_07175905.1| aspartyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300994105|ref|ZP_07180688.1| aspartyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301050780|ref|ZP_07197637.1| aspartyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|306814304|ref|ZP_07448470.1| aspartyl-tRNA synthetase [Escherichia coli NC101]
 gi|331657915|ref|ZP_08358877.1| aspartate--tRNA ligase [Escherichia coli TA206]
 gi|29336537|sp|Q8FGQ9|SYD_ECOL6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123266056|sp|Q1RAR8|SYD_ECOUT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123343924|sp|Q0TGW6|SYD_ECOL5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225343|sp|A1AC27|SYD_ECOK1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226736536|sp|B7MBS5|SYD_ECO45 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781733|sp|B7MVZ7|SYD_ECO81 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|26108535|gb|AAN80737.1|AE016761_312 Aspartyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91072665|gb|ABE07546.1| aspartyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110343576|gb|ABG69813.1| aspartyl-tRNA synthetase [Escherichia coli 536]
 gi|115513142|gb|ABJ01217.1| aspartyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|190906682|gb|EDV66287.1| aspartyl-tRNA synthetase [Escherichia coli F11]
 gi|218365500|emb|CAR03227.1| aspartyl-tRNA synthetase [Escherichia coli S88]
 gi|218427368|emb|CAR08263.2| aspartyl-tRNA synthetase [Escherichia coli ED1a]
 gi|226900577|gb|EEH86836.1| aspartyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|227837279|gb|EEJ47745.1| aspartyl-tRNA synthetase [Escherichia coli 83972]
 gi|294492571|gb|ADE91327.1| aspartyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|300297535|gb|EFJ53920.1| aspartyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300307326|gb|EFJ61846.1| aspartyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300406367|gb|EFJ89905.1| aspartyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|305852463|gb|EFM52914.1| aspartyl-tRNA synthetase [Escherichia coli NC101]
 gi|307553885|gb|ADN46660.1| aspartate tRNA synthetase [Escherichia coli ABU 83972]
 gi|307626651|gb|ADN70955.1| aspartyl-tRNA synthetase [Escherichia coli UM146]
 gi|312946466|gb|ADR27293.1| aspartyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315286565|gb|EFU46000.1| aspartyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315290345|gb|EFU49721.1| aspartyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315296557|gb|EFU55854.1| aspartyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|323952368|gb|EGB48241.1| aspartyl-tRNA synthetase [Escherichia coli H252]
 gi|323956497|gb|EGB52239.1| aspartyl-tRNA synthetase [Escherichia coli H263]
 gi|324007227|gb|EGB76446.1| aspartyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|324012865|gb|EGB82084.1| aspartyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|331056163|gb|EGI28172.1| aspartate--tRNA ligase [Escherichia coli TA206]
          Length = 590

 Score =  636 bits (1640), Expect = e-180,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 588


>gi|282850505|ref|ZP_06259884.1| aspartate--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579998|gb|EFB85402.1| aspartate--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 601

 Score =  635 bits (1639), Expect = e-180,   Method: Composition-based stats.
 Identities = 229/596 (38%), Positives = 354/596 (59%), Gaps = 9/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61
           +RTH CG +   +VG  V L GWV R R HGG+IFLD+RD  G+ QVVA+PD     F  
Sbjct: 8   HRTHGCGTISEQEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGVVQVVASPDHNVESFHK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VLC+ G +  R    IN N+ TG  E+  +++ +L+ A+  P  +  + +  
Sbjct: 68  AEDVRNEYVLCVRGKITKRDEAAINPNLPTGAYEMFCEELRVLNSAKTPPFYIQDDIDVD 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + +N++ R ++  +MR    + +F+E  TP+LT S+PEGARD+L
Sbjct: 128 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 188 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDLEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++DI   +E ++  +F+        S    RI +D+A+ +YG+DKPDLR  +   +
Sbjct: 247 SFVDEEDIYALLEEMIAHIFKTALGKEI-SLPMPRITWDEAMDKYGSDKPDLRFDMAFTD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VT+    +EF+VF  ++      +   +P    G  R   D + E+    G  GLA+  +
Sbjct: 306 VTDLVKDTEFKVFRSVIDNGGVVKGIVVP-GDAGIPRRELDDLVEYVNRYGAKGLAWACF 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D     +    + K L       I  ++  + GD    IA  P        + R  +A
Sbjct: 365 NEDG----SIKSQIMKFLGEDTIRNIGEKMGAKGGDLVLMIADKPATVARALGELRLEMA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + + +I+ +   F W+ DFP +E+NE+EK+    H+PFTMP+        +D  ++KA  
Sbjct: 421 RRMNMIDQDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHADLDKLESDPGNVKAIA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R + ++V  + F  +G+S E   ++FG +  AFQ G PPH G A 
Sbjct: 481 YDMVLNGVEIGGGSLRIYQADVQEKVFKAIGLSIEEARSKFGFMLDAFQYGAPPHAGCAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QL+EL ++     ++
Sbjct: 541 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIKSDVEEEQ 596


>gi|270262227|ref|ZP_06190499.1| hypothetical protein SOD_b04350 [Serratia odorifera 4Rx13]
 gi|270044103|gb|EFA17195.1| hypothetical protein SOD_b04350 [Serratia odorifera 4Rx13]
          Length = 594

 Score =  635 bits (1639), Expect = e-180,   Method: Composition-based stats.
 Identities = 224/592 (37%), Positives = 332/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    F+ A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQKAAFDKAY 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  +EI++ +E   LP+   +   E 
Sbjct: 62  DLRNEFCIQIVGTVRARPDSQINKDMSTGEVEVFAHALEIINRSEP--LPLDSNQVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSNGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME + R ++ +    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLARDLWLDVKGVD--LGDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDAKGRVAAICVPGGAQLTRKLIDEYGTFVNIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    EAI  R + Q GD  FF A             R  + ++
Sbjct: 357 RAAGMEGVQSPIAKFLSAEVLEAILARTNAQTGDILFFGADSFKIVTDAMGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   + +   W++DFP +E +  E  +   H+PFT P+        +   +  A  YD
Sbjct: 417 LQLTKLDSWAPLWVVDFPMFEED-GEGGLAAMHHPFTAPRDMSPEELNSAPTTAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H SE+    FS +GI++     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRSEMQQTVFSILGINEHEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+ELG+ +V+  
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLQELGICVVKKA 587


>gi|237809454|ref|YP_002893894.1| aspartyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259511872|sp|C4LBN4|SYD_TOLAT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|237501715|gb|ACQ94308.1| aspartyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 588

 Score =  635 bits (1639), Expect = e-180,   Method: Composition-based stats.
 Identities = 227/594 (38%), Positives = 337/594 (56%), Gaps = 8/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +  S V   V L GWVHR R  GG+IF+D+RD  GI QV  +PD    F +A 
Sbjct: 2   RSIYCGQVTSSHVEQTVTLCGWVHRRRDLGGLIFIDMRDREGIVQVFFDPDKPEAFALAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    IN ++ TG++E+ A  +EI++ AE   LP+   +   E 
Sbjct: 62  ELRNEFCIRVTGVVRARPDSQINKDMATGEVEIFAHGLEIINRAEP--LPLDFNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +  ++  R RI + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMAASLKTRARITSFVRRYMDEHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   MEN++RG+++     +     F  + +D+A+RRYG+DKPDLRNP+ M ++ 
Sbjct: 239 LNAEQVRELMENLIRGLWQNIIGVD--LGQFPIMTFDEAMRRYGSDKPDLRNPMEMVDIA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +      F VF+   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DLLKDVSFAVFAGPANDPKGRVAALRVPDGAQLSRKQIDEYTQFVSIYGAKGLAWMKVNQ 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            +SG      PVAK LN      I  R   QDGD  FF A      C      R  +A++
Sbjct: 357 ADSGLAGVQSPVAKFLNDEIVREILSRTSAQDGDIIFFGADSKKVVCDAIGALRLKLARD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++  NC++  W++DFP +E +  E  +   H+PFT P+    +    D L+  A  YD
Sbjct: 417 LDLV-ENCWKPLWVVDFPMFEED-GEGGVTAMHHPFTAPKDFTPAQLEADPLAAYANAYD 474

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GIS+   + +FG L  A + G PPH G+A G+
Sbjct: 475 MVINGYEVGGGSVRIHRGDMQQTVFRAIGISEAEQKEKFGFLLDALKFGTPPHAGLAFGL 534

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+ MLL G  N+R+V  FP +     L+  +PS  + +QL EL ++      +
Sbjct: 535 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANQQQLSELAIQTTVKAAE 588


>gi|229918419|ref|YP_002887065.1| aspartyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|259511860|sp|C4L535|SYD_EXISA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229469848|gb|ACQ71620.1| aspartyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 590

 Score =  635 bits (1639), Expect = e-180,   Method: Composition-based stats.
 Identities = 231/595 (38%), Positives = 342/595 (57%), Gaps = 10/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RTH  G +  S +G  V+L GWV + R  GG+IF+D+RD  GI QVV  P++    ++A+
Sbjct: 4   RTHMNGRVTESLIGQEVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVVRPENEAVHQLAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYPE 122
           ++RSE+VL + G V+ R  E  N N+ TG IE+ A +I IL+ A+  P+P+  E     E
Sbjct: 64  TIRSEYVLDVKGTVLER--ENKNPNMPTGNIEVIASEINILNAAKMTPIPIGDEAENVSE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  L +    R++  N++R  +  + F+E  TPILT S+PEGARD+LV
Sbjct: 122 DLRLKYRYLDLRRPALQETFRLRSKTSNTIRNFLTEQEFLEVETPILTKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D+E S
Sbjct: 182 PSRVHGGEFYALPQSPQLFKQLLMVAGFDRYFQIARCFRDEDLRADRQP-EFTQVDIETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++ +D++  ME+++  V E           F R+ + +A+RR+G+DKPD R  + + +V
Sbjct: 241 FMDIEDLMAMMESMMGQVMESTLGRTDTPAKFERMTHAEAMRRFGSDKPDTRFGLELIDV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +    + F+VF   L  N   +   +  +    +R   D++ E+    G  GLA++   
Sbjct: 301 ADAVKGAGFKVFDAALESNGQVKAINVKGEADNFSRKDIDKLQEFTAVYGAKGLAWLKVT 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                     GP+AK  +    + +    + + GD   F+A  P          R  +  
Sbjct: 361 A-----EGLNGPIAKFFDETYAQKLIEATNAEAGDLLLFVASKPTVVADSLGALRVKLGH 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+ + F F W+ DFP   + EE+ +    H+PFTMP      L   D  S++A  Y
Sbjct: 416 ELGLIDESKFNFLWVTDFPLVTFEEEDGRFYANHHPFTMPNREDLHLLETDPASVRAVAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G  R +  ++  + F  +G ++E    +FG L  AF+ G PPH GIA G
Sbjct: 476 DLVLNGYELGGGSQRIYERDIQERMFKLLGFTQEEAVEQFGFLLEAFEYGTPPHAGIALG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VM+L G  N+R+   FP + +   LL  +PS V+  QL EL +R     KK
Sbjct: 536 LDRLVMILAGRSNLRDTIAFPKTASASCLLTQAPSPVADAQLEELSIRTAIKEKK 590


>gi|294792128|ref|ZP_06757276.1| aspartate--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294793999|ref|ZP_06759136.1| aspartate--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455569|gb|EFG23941.1| aspartate--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294457358|gb|EFG25720.1| aspartate--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 601

 Score =  635 bits (1639), Expect = e-180,   Method: Composition-based stats.
 Identities = 231/596 (38%), Positives = 354/596 (59%), Gaps = 9/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61
           +RTH CG +   +VG  V L GWV R R HGG+IFLD+RD  G+ QVVA+PD     F  
Sbjct: 8   HRTHGCGTISEQEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGVVQVVASPDHNVESFHK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VLC+ G +  R    IN N+ TG  E+  +++ +L+ A+  P  +  + +  
Sbjct: 68  AEDVRNEYVLCVRGKITKRDEAAINPNLPTGAYEMFCEELRVLNSAKTPPFYIQDDIDVD 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + +N++ R ++  +MR    + +F+E  TP+LT S+PEGARD+L
Sbjct: 128 ENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G+FYALPQ+PQ +KQ+LM +G+++YFQI  CFRDED R+DR P EF QLD+EM
Sbjct: 188 VPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQP-EFTQLDLEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++DI   +E ++  VF+        S    RI +D+A+ +YG+DKPDLR  +   +
Sbjct: 247 SFVDEEDIYALLEEMIAHVFKTALGKEI-SLPMPRITWDEAMDKYGSDKPDLRFDMAFTD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VT+    +EF+VF  ++      +   +P    G  R   D + E+    G  GLA+  +
Sbjct: 306 VTDLVKDTEFKVFRSVIDNGGVVKGIVVP-GDAGIPRRELDDLVEYVNRYGAKGLAWACF 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D     +    + K L       I  ++  + GD    IA  P        + R  +A
Sbjct: 365 NEDG----SIKSQIMKFLGEDTIRNIGEKMGAKGGDLVLMIADKPATVARALGELRLEMA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + + +I+ +   F W+ DFP +E+NE+EK+    H+PFTMP+        +D  S+KA  
Sbjct: 421 RRMNMIDQDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHADLDKLESDPGSVKAIA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R + ++V  + F  +G+S E   ++FG +  AFQ G PPH G A 
Sbjct: 481 YDMVLNGVEIGGGSLRIYQADVQEKVFKAIGLSIEEARSKFGFMLDAFQYGAPPHAGCAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QL+EL ++     ++
Sbjct: 541 GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIKPDVEEEQ 596


>gi|222033615|emb|CAP76356.1| Aspartyl-tRNA synthetase [Escherichia coli LF82]
          Length = 590

 Score =  635 bits (1639), Expect = e-180,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLAMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 588


>gi|15831830|ref|NP_310603.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168762340|ref|ZP_02787347.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|217328834|ref|ZP_03444915.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|22257054|sp|Q8XCI7|SYD_ECO57 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|13362044|dbj|BAB35999.1| aspartate tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|189367330|gb|EDU85746.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|209767420|gb|ACI82022.1| aspartate tRNA synthetase [Escherichia coli]
 gi|217318181|gb|EEC26608.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
          Length = 590

 Score =  635 bits (1639), Expect = e-180,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLRSVEFAVFAGPANDPKGRVAALCVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIQVVKKAE 588


>gi|258541467|ref|YP_003186900.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256632545|dbj|BAH98520.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256635602|dbj|BAI01571.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256638657|dbj|BAI04619.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256641711|dbj|BAI07666.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256644766|dbj|BAI10714.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256647821|dbj|BAI13762.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256650874|dbj|BAI16808.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256653865|dbj|BAI19792.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 595

 Score =  635 bits (1639), Expect = e-180,   Method: Composition-based stats.
 Identities = 302/596 (50%), Positives = 391/596 (65%), Gaps = 7/596 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+HSC  L  SD G+  RLSGWVH  R HGG++F+D+RD  G+TQ+V    S   E
Sbjct: 1   MHPYRSHSCSALRASDAGTTARLSGWVHSKRDHGGLLFIDLRDETGLTQIVIPAGSPVME 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R E V+ + G V+ R   T N ++ TG IEL A+++ + S A  LPL V G+  Y
Sbjct: 61  TAEHLRVESVITVTGEVVLRDETTRNPDLATGDIELRARELIVQSSAAVLPLQVAGQEHY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R +YR++DLRR+ +H NI  R+ II SMR RM    F E  TPILTASSPEGARDF
Sbjct: 121 SDELRLRYRYIDLRREQVHANIRLRSAIIASMRRRMTDLGFTEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR + G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPSRTHAGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEASRADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEF-SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           M+F  QD+I   +E V+ G+F EF       +  F RI Y  A++ YG+DKPDLRNP+++
Sbjct: 241 MAFATQDEIFAVLEEVMSGLFTEFGKGRAVSTAPFERIPYARAMKVYGSDKPDLRNPLLI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTE F  S F +F++I +          P  GG  +R+F D++N WAR  G  GL YI
Sbjct: 301 TDVTEDFAGSGFGLFARIAADGGEVRAIPAPGAGGR-SRSFYDKLNAWARENGAGGLGYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +         G GP+AK+L     EAIR +L +  GD+ FF AG       F+   R  
Sbjct: 360 TF-----AEEGGQGPIAKNLEADRVEAIRTKLGLNPGDAVFFAAGKGHDVAKFSGLVRTR 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +I  + F FCWI DFP YE NEE   IDF+HNPF+MPQGG+E+L   + L I A
Sbjct: 415 IAEELDLIEKDAFRFCWITDFPMYELNEETGLIDFSHNPFSMPQGGLEALNTKNPLDILA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH+ +VM++AF   G  +  VE RFGG+  AF+ G PPHGG 
Sbjct: 475 YQYDIVCNGIELSSGAIRNHLPDVMIRAFEIAGYPESEVEARFGGMLNAFRYGAPPHGGS 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DRIVMLL    N+REV LFP++Q   DL+MG+P+ V  E+L+EL L +   P
Sbjct: 535 APGVDRIVMLLADEPNIREVILFPLNQQGEDLMMGAPAPVPPERLKELSLALNLKP 590


>gi|300113111|ref|YP_003759686.1| aspartyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299539048|gb|ADJ27365.1| aspartyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 595

 Score =  635 bits (1639), Expect = e-180,   Method: Composition-based stats.
 Identities = 225/593 (37%), Positives = 336/593 (56%), Gaps = 5/593 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H CG+L    +   V L GWV+R R HGG+IF+D+RD  G+ Q+V +P+     F  A
Sbjct: 2   RSHYCGELSEDHLEQSVTLCGWVNRRRDHGGVIFIDLRDREGLIQLVFDPEYSPESFRHA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +RSE+VL + G V  R   T N ++ TGQ+E+  Q++ +L+ +E  P PV  + E  E
Sbjct: 62  EQIRSEYVLQVKGRVQHRPEGTENPDLKTGQVEVLGQELILLNASETPPFPVDEKLEVGE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR +YR++DLRR    + +  R+ II  +R  +    F++  TPILT S+PEGARDFLV
Sbjct: 122 DIRLRYRYIDLRRPESLQRLRLRSAIIRQLRKFLDERGFLDIDTPILTQSTPEGARDFLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + G F+ALPQ+PQ +KQLLM +G DRY+Q+  CFRDED R+DR P EF QLD+E S
Sbjct: 182 PSRTHPGQFFALPQSPQLFKQLLMVAGVDRYYQVVRCFRDEDLRADRQP-EFTQLDIEAS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ ++ ++  ME + + +F        +   F+R+ Y +A+  +G DKPDLR P+ +  V
Sbjct: 241 FLHEEALMALMEEMFKELFATVLE-TPLHTPFIRMPYAEALACFGLDKPDLRIPLRLVEV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     +F+VF++      G         GG  +R   +   ++    G  GLAYI   
Sbjct: 300 GDLMKTVDFKVFAQPAQNRDGRVAALRLPGGGKLSRKEIEDYTQFVAIYGAKGLAYIKVI 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K L      A+  R+  ++GD  FF A             R  +  
Sbjct: 360 ERSRGREGLQSPILKFLPDEVIGAMLERIGAENGDIVFFGADKASIVNESLGALRVKLGH 419

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           + G++  + +   WI+DFP +EWNE++ +    H+PFT P+    SL   +  + ++  Y
Sbjct: 420 DHGLV-EHGWSPLWIIDFPMFEWNEDDDRWHALHHPFTAPKEEDLSLLEQNPGACRSRAY 478

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+  G IR   ++V  Q F  +GI  E  +++FG L  A + G PPHGGIA G
Sbjct: 479 DLVLNGTEVGGGSIRISQAQVQSQVFRLLGIGDEEAQDKFGFLLDALKYGCPPHGGIAFG 538

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           +DR+VML+ G+ ++REV  FP +Q     L G+P  V+  QLRELG+ +   P
Sbjct: 539 LDRLVMLMTGSASIREVIPFPKTQTAACPLTGAPGQVAEAQLRELGIGVRRPP 591


>gi|51893559|ref|YP_076250.1| aspartyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|62287548|sp|Q67LP0|SYD_SYMTH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|51857248|dbj|BAD41406.1| aspartyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 593

 Score =  635 bits (1638), Expect = e-180,   Method: Composition-based stats.
 Identities = 240/599 (40%), Positives = 341/599 (56%), Gaps = 16/599 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
             RT  CG++  + VG  V ++GWV R R HG +IF+D+RD  G+ QVV + +      F
Sbjct: 1   MKRTVYCGEVTDALVGQEVTVNGWVQRRRDHGSLIFVDLRDRTGLVQVVFDVEECGADLF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ VRSE+VL + G ++ R+ E +N NI TG+ E+ A  + ILS A+  P  +  + +
Sbjct: 61  RKAEQVRSEYVLAVRGRLVHRTPEAVNPNIPTGRFEIRALDLRILSPAKTPPFYIQDDLD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E++R KYR+LDLRR  + +N++ R R+  ++R       F+E  TP+LT S+PEGARD
Sbjct: 121 VDETVRLKYRYLDLRRPEMQRNLILRHRVTKAVRDFFDEHGFLEIETPMLTKSTPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN G FYALPQ+PQ +KQL M SG +RY QI  CFRDED R+DR P EF Q+D+
Sbjct: 181 YLVPSRVNPGKFYALPQSPQIFKQLCMVSGLERYVQIVRCFRDEDLRADRQP-EFTQIDV 239

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVE+DD+L+ ME ++  VF +      V   F R+ Y +A+ RYG+DKPDLR  + +
Sbjct: 240 EMSFVERDDVLSMMEQMVARVFRDALGVE-VPTPFKRLTYAEAMARYGSDKPDLRFGMEL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V++      F VF   +      +       GG  +R   D + E+ ++    GLAYI
Sbjct: 299 VDVSDVAAGCGFGVFKGAVEAGGQVKGINAKGCGG-YSRKQIDELTEFVKTYKAKGLAYI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              L E G V       K L    T  I  RL+ + GD   F+A  P    +     R  
Sbjct: 358 A--LGEGGEV--RSSFTKFLTEAETAEIVRRLEGEPGDLLLFVADQPDVVAAALGALRVE 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM------ESLKGND 473
           +   LG+     F   W++DFP  EW+EEE +    H+PFT P          E     +
Sbjct: 414 MGNRLGLRKPGEFNLLWVIDFPLLEWDEEENRFVAVHHPFTSPHPEDLDKVFKEGATREE 473

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           L +I+A  YDLV NG E+  G IR H   +  + F  +G + E  + +FG L  AF+ G 
Sbjct: 474 LAAIRANAYDLVLNGVELGGGSIRIHQRPLQNRMFELLGFTPEEAQAKFGFLLEAFEYGA 533

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           PPHGGIA G+DR VMLL G +++R+V  FP +    DL+  +PS V+ +QL+EL +R  
Sbjct: 534 PPHGGIAFGLDRFVMLLAGRQSIRDVIAFPKTAKATDLMTDAPSEVAPKQLQELHIRTT 592


>gi|315658100|ref|ZP_07910972.1| aspartate--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315496429|gb|EFU84752.1| aspartate--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 588

 Score =  635 bits (1638), Expect = e-180,   Method: Composition-based stats.
 Identities = 231/592 (39%), Positives = 337/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +    +G  + L GWVH  R  GG+IF+D+RD  GI Q+V NP        I
Sbjct: 3   KRTTYCGLVTEELLGEKITLKGWVHNRRDLGGLIFIDLRDREGIVQIVFNPAFSQEALNI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ + G V  R  ETIN  I TGQ+E+    IE+++ +E          +  
Sbjct: 63  AETVRSEYVVEVQGQVTKRDPETINPKIKTGQVEVQVSHIEVINKSETPPFSINEENQNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +I  S+R  +    F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRTELAQTFKMRHQITQSIRHYLDNNGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +LR V ++    + V   F R+ Y++A+ RYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVMAMGEEMLRKVVKDVKGID-VEGPFPRMTYNEAMSRYGSDKPDTRFDMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++     +F+VF   ++ N   +            R   D + E+    G  GLA++ 
Sbjct: 301 DVSKLGTEMDFKVFKDTVNQNGQVKAIVAKGAADNYTRKDMDGLTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                       GP+A+     N   +      + GD   F+A  P          R  +
Sbjct: 361 VV-----EEGLSGPIARFFEDANVATLTELTGAEPGDLVMFVADKPNVVAQSLGALRIKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+        ++  + +A 
Sbjct: 416 AKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEEDIKKLDSEPENAQAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  ++  + F  +G +KE  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHHGDLQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +PS VS +QL+EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPSDVSDKQLQELSLRIR 587


>gi|238756964|ref|ZP_04618152.1| Aspartyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238704794|gb|EEP97323.1| Aspartyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 598

 Score =  635 bits (1638), Expect = e-180,   Method: Composition-based stats.
 Identities = 221/592 (37%), Positives = 332/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    ++ A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQNAAYKQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQIAGTVRARPDSQINKDMSTGEVEIFANTLNIINRSEP--LPLDSNQINSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVMEKLVRELWQETKGVD--LGDFPVMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   ++    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDAKGRVAALRVPGGAQVTRKQIDEYGQFVSIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    EAI  R   + GD  FF A             R  + ++
Sbjct: 357 RAAGVEGVQSPIAKFLSADVLEAILARTQAESGDILFFGADSYKVVTDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + N +   W++DFP +E ++ E  +   H+PFT P+            +  A  YD
Sbjct: 417 LALTHLNTWAPLWVVDFPMFE-DDSEGGLSAMHHPFTAPKDMSPEQLAAAPTTAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+  Q F  +GI++     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRTEMQQQVFGILGINEHEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V   
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVVAKK 587


>gi|215487079|ref|YP_002329510.1| aspartyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|254781731|sp|B7USP3|SYD_ECO27 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|215265151|emb|CAS09539.1| aspartyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
          Length = 590

 Score =  635 bits (1638), Expect = e-180,   Method: Composition-based stats.
 Identities = 221/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G ++F+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLLFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 588


>gi|220935408|ref|YP_002514307.1| aspartyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254781760|sp|B8GUK0|SYD_THISH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219996718|gb|ACL73320.1| aspartyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 592

 Score =  635 bits (1638), Expect = e-180,   Method: Composition-based stats.
 Identities = 222/591 (37%), Positives = 333/591 (56%), Gaps = 5/591 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG +  S +   V L GWV+R R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 2   RSHYCGSVNESHLDQEVTLCGWVNRRRDHGGVIFIDLRDREGLVQVVFDPDLPEVFATAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL + G V  R A T N ++ TG IE+  +++ +L+ AE  P     E E  E 
Sbjct: 62  RVRSEYVLKVKGRVRRRPAGTENPDLPTGAIEVLGRELTVLNSAETPPFQ-LDEDEVNEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR++DLRR  + K +  R R+  ++R  +    F++  TP+LT ++PEGARD++VP
Sbjct: 121 TRLRYRYVDLRRPAMQKRLQMRARVSRTLRRFLEDNGFLDIETPMLTKATPEGARDYIVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM  G DRY+QI  CFRDED R+DR P EF QLD+E SF
Sbjct: 181 SRTHPGSFFALPQSPQLFKQLLMMGGMDRYYQIVRCFRDEDLRADRQP-EFTQLDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ I+  ME ++R +F +      +   F R+ Y +A+ RYG+DKPDLR P+ +  +T
Sbjct: 240 MDEEGIMGLMEEMVRELFAQVLEV-PLHTPFQRMSYAEAMARYGSDKPDLRIPLELTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS       G        KGG  +R   D    +    G  GLAYI    
Sbjct: 299 DIMGEVDFKVFSGPARDPAGRVAALRVPKGGELSRKDIDDYTHFVGRYGAKGLAYIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K +       I  R   +DGD  FF A             R  +  +
Sbjct: 359 LNAGREGLQSPILKFMPDTVVVEILGRTGAEDGDLIFFGADKARIVNEALGALRVKLGHD 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG++    +   W++DFP +E +E+E +    H+PFT P+         +   + +  YD
Sbjct: 419 LGLVERG-WRPLWVVDFPMFEHDEKEGRWVALHHPFTAPRVERPEELTGNPGEMISRAYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H + +    F+ +GI +    ++FG L  A + G PPHGGIA G+
Sbjct: 478 MVLNGTEVGGGSVRIHTTAMQQAVFNLLGIGEAEARDKFGFLLDALKYGCPPHGGIAFGL 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR+VML+ G++++R+V  FP +Q     L  +P+ VS  QL+EL +R+ + 
Sbjct: 538 DRLVMLMTGSQSIRDVMAFPKTQTAHCPLTDAPAEVSDAQLKELSIRVKKQ 588


>gi|34499195|ref|NP_903410.1| aspartyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|46577181|sp|Q7NRP0|SYD_CHRVO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|34105046|gb|AAQ61402.1| aspartyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 597

 Score =  635 bits (1637), Expect = e-180,   Method: Composition-based stats.
 Identities = 233/597 (39%), Positives = 341/597 (57%), Gaps = 9/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V + GW HR R HGG+IF+D+RD  G+ QVV +PD+   F++A 
Sbjct: 2   RTDYCGLIDKKYLGQTVTVKGWAHRRRDHGGVIFIDLRDREGLVQVVIDPDTPEAFKLAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R E+VL I G+V  R A T N+ +I+G+IE+ A++IEIL+ A   P  +  E    E+
Sbjct: 62  SSRGEYVLSITGIVRERPAGTANSKMISGEIEILAKEIEILNAAATPPFQIDDENLS-EN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + KN+  R ++   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPAMQKNLRLRYKVAMGVRNHLDKQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + +F++       +  F R+ Y DA+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMTKEIFQDVLGVTLPT--FPRMTYGDAMFYYGSDKPDMRVALKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR- 362
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DVMKSEEFKVFRGAADMANGRVVALRVPNGASFSRKEIDDYTQFVAIYGAKGLAYIKVND 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + +        P+ K L+    + I  R   Q+GD  FF A             R  I  
Sbjct: 358 VTKLNEEGLQSPIVKFLSANGLKEIIARTGAQNGDIIFFGADKAKVVNEAIGALRIKIGH 417

Query: 423 ELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G+ N      +   W++DFP +E +EEE +    H+PFT P+ G E L   D     A
Sbjct: 418 EHGLENGYFVKEWRPLWVVDFPMFEHDEEEDRWTACHHPFTSPKPGHEDLMATDPGKCLA 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G IR H +++  + F  + IS E  +N+FG L    + G PPHGG+
Sbjct: 478 RAYDMVLNGWEIGGGSIRIHRADIQEKVFGALKISPEEQQNKFGFLLDNLKFGAPPHGGL 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+ +  +
Sbjct: 538 AFGLDRLVTLMCGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELNLRLRQKAE 594


>gi|239904667|ref|YP_002951405.1| aspartyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239794530|dbj|BAH73519.1| aspartyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 592

 Score =  635 bits (1637), Expect = e-180,   Method: Composition-based stats.
 Identities = 241/594 (40%), Positives = 341/594 (57%), Gaps = 14/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--A 62
           R+H CG L  SDVGS V L GW    R HGG+IF+D+RD  G+TQVV  P+++  E+  A
Sbjct: 6   RSHDCGALTASDVGSEVCLMGWAQFRRDHGGLIFIDLRDRGGLTQVVFCPEASQAELERA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+E+VL + G V +R     N N+ TG+IE+   + ++L+ A   P P+    +  E
Sbjct: 66  HVLRTEYVLAVKGRVRARPEGMANPNMPTGEIEVEVHEFKLLNTAATPPFPIEDRIDASE 125

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  L  N + R + + S+R  +    F+E  TP+LT S+PEGARDFLV
Sbjct: 126 MLRLKYRYLDLRRPKLAANFILRNKAVQSIRRYLDELGFLEVETPVLTKSTPEGARDFLV 185

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN GSFYALPQ+PQ +KQLLM +GFDRY+Q+  CFRDED R+DR P EF Q+D+EMS
Sbjct: 186 PSRVNNGSFYALPQSPQLFKQLLMMAGFDRYYQVVKCFRDEDLRADRQP-EFTQVDIEMS 244

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ ++   E +++ +F E +    +   F R+ + +AIR YG DKPD+R  + + +V
Sbjct: 245 FVDEEQVMGMAETMVKTMFREAAGV-VLPEVFPRMPFAEAIRDYGLDKPDIRFGLKLVDV 303

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T    +S F+VF+K   V            G   +R   D   E+ +  G  GLA+I  +
Sbjct: 304 TSIVKNSGFQVFAKAELVKG-----IRVPGGAALSRKEIDDFTEFVKIYGAKGLAWIKIK 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            DE        P AK L+    + +     ++ GD  FF AG      +     R  + +
Sbjct: 359 EDE-----WQSPFAKFLSDEEKKGLTDAFGLEVGDIVFFQAGASDMVNNALGYLRLQLGE 413

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              +I    F   WI DFP  E++ E K+    H+PFT PQ G      +      A  Y
Sbjct: 414 RFEMIPEGSFAPVWITDFPLLEYDPEAKRWAARHHPFTSPQPGQLGTLESAPGEALARAY 473

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG EI  G IR H  E     F+ +GI  +  E++FG L RA + G PPHGGIA G
Sbjct: 474 DLVLNGSEIGGGSIRIHDRETQRAMFAVLGIDAQEAEDKFGFLLRALEYGAPPHGGIAFG 533

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR++M+L GAK++R+V  FP +Q    L+  +P  VS  QLRELG+++    K
Sbjct: 534 LDRLIMILAGAKSIRDVIAFPKTQKALCLMTEAPGEVSTNQLRELGIKLRTRDK 587


>gi|300904750|ref|ZP_07122580.1| aspartyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|301304455|ref|ZP_07210567.1| aspartyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300403334|gb|EFJ86872.1| aspartyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300840306|gb|EFK68066.1| aspartyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|315257302|gb|EFU37270.1| aspartyl-tRNA synthetase [Escherichia coli MS 85-1]
          Length = 590

 Score =  635 bits (1637), Expect = e-180,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 331/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELGIQVVKKAE 588


>gi|83590512|ref|YP_430521.1| aspartyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|97196732|sp|Q2RHW1|SYD_MOOTA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|83573426|gb|ABC19978.1| aspartyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 600

 Score =  635 bits (1637), Expect = e-180,   Method: Composition-based stats.
 Identities = 229/588 (38%), Positives = 341/588 (57%), Gaps = 9/588 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIA 62
           +R+H CG+L  +D G  V L GWVHR R HGG+IF+D+RD  G+ QVV +P S   F+ A
Sbjct: 11  HRSHGCGELTAADAGKEVTLMGWVHRRRDHGGLIFIDLRDRSGLVQVVCDPKSGPAFQKA 70

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+V+ + GLV  R   T+N  + TG+IE+ A++  +L+ A+  P  +    +  E
Sbjct: 71  EEVRNEYVVAVRGLVRRRPEGTVNPKLPTGEIEVVAEEFRLLNRAKTPPFYIDDGIDVDE 130

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YR+LDLRR  + + +  R R   ++R  + A  F E  TP+LT S+PEGARDFLV
Sbjct: 131 ALRLRYRYLDLRRPEMQRLLYLRYRTTRAIRDFLDARGFWEIETPMLTRSTPEGARDFLV 190

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQ +KQ+LM +G +RYFQI  CFRDED R+DR P EF QLDMEMS
Sbjct: 191 PSRLRPGEFFALPQSPQLFKQILMVAGVERYFQIVRCFRDEDLRADRQP-EFTQLDMEMS 249

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++DIL  +E ++  VF E      ++    R+ Y +A+ RYG+DKPD+R  + + +V
Sbjct: 250 FVQREDILKLVEELMAYVFRETLGVE-LALPLPRLTYREAMDRYGSDKPDIRFGMEIVDV 308

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++      F+VF++ ++          P   G  +R   D +   A   G  GLA++   
Sbjct: 309 SDLVAGCGFKVFAEAVARGGVVRGLCAPGCAG-YSRRELDELTRQAAVFGAKGLAWMAVT 367

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                      P+AK       E +  RL  + GD   F+A       +     R  + +
Sbjct: 368 -----PEGIRSPIAKFFTSGELEGLVARLAGKPGDLLLFVADTETTAATALGALRLEMGR 422

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L + +     F W+ +FP  E++ EEK+    H+PFTMP      L  +D L ++A  Y
Sbjct: 423 RLHLYDPEQLAFTWVTEFPLLEYSAEEKRYVAVHHPFTMPMEEDWPLLDSDPLRVRALAY 482

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+  G IR H  ++  + F+ +G + E   ++FG L  AF+ G PPHGGIA G
Sbjct: 483 DLVLNGVELGGGSIRIHRRDIQEKMFNLLGFTPEAARDKFGFLLDAFEYGTPPHGGIAFG 542

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           +DR++ML+     +R+   FP +Q+   L+  +PS VS EQL+EL LR
Sbjct: 543 LDRMLMLMARRDTIRDCIPFPKTQSGTCLMTAAPSGVSPEQLQELHLR 590


>gi|325268075|ref|ZP_08134721.1| aspartate--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324980460|gb|EGC16126.1| aspartate--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 602

 Score =  635 bits (1637), Expect = e-180,   Method: Composition-based stats.
 Identities = 230/605 (38%), Positives = 347/605 (57%), Gaps = 12/605 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F +A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +++G+IE+ A++IEIL+ A   P  +  +    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMVSGKIEILAKEIEILNPAATPPF-MIDDENISET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R + R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLQNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++         +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVE--LGDFPRMPYSEAMFYYGSDKPDMRISLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR- 362
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKLSRKEIDEYTQFVGIYGAKGLAYIKVND 357

Query: 363 ---LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              L    N     P+ K L+  +   I  R   Q+GD  FF A             R  
Sbjct: 358 VTNLSNGENSGLQSPIVKFLSESSLHEIIKRTGAQNGDIIFFGADKAKVVNEAIGALRIK 417

Query: 420 IAQELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           I +E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D  +
Sbjct: 418 IGKEHGADNGYFVDEWKPLWVVDFPMFEYDEENDRWAAMHHPFTSPKPGHEDLMESDPEN 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G IR H +++  + F+ + I+ E  + +FG L    + G PPH
Sbjct: 478 CLARAYDMVLNGWEIGGGSIRIHRADIQEKVFAALKITPEEQQEKFGFLLDNLKFGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+ +   
Sbjct: 538 GGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELSLRLRQKAA 597

Query: 597 KILKI 601
           +  + 
Sbjct: 598 ENKEA 602


>gi|284921786|emb|CBG34859.1| aspartyl-tRNA synthetase [Escherichia coli 042]
          Length = 590

 Score =  635 bits (1637), Expect = e-180,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANNPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSLANPTALAELSIQVVKKAE 588


>gi|218780598|ref|YP_002431916.1| aspartyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|226736533|sp|B8FKS6|SYD_DESAA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218761982|gb|ACL04448.1| Aspartyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 597

 Score =  635 bits (1637), Expect = e-180,   Method: Composition-based stats.
 Identities = 244/594 (41%), Positives = 357/594 (60%), Gaps = 11/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RTH+CG L   D G  V L GW  R R HGG+IF+D+RD YG+TQVV NP++     ++A
Sbjct: 10  RTHNCGVLRKEDTGKTVTLMGWAQRWRDHGGVIFIDLRDRYGVTQVVFNPENNAEVHKLA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+RSEWV+ + G V+ R    +N  + TG+IE+    ++IL+ ++  P  V    E  E
Sbjct: 70  DSIRSEWVIAVQGEVLERPDGMVNPKMETGEIEVMVSDLKILNKSKTPPFMVEDNAEVSE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YR+LDLRR  + KNI+ R ++   +R  +    F++  TP+LT S+PEGARD+LV
Sbjct: 130 NLRLEYRYLDLRRPRIAKNIMLRHQVGACVRAFLNENEFLDIETPVLTKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQLLM +G+DRY+QI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRVNTGLFYALPQSPQLFKQLLMVAGYDRYYQIVRCFRDEDLRADRQP-EFTQIDLEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV ++D++   E ++  VF++      V   F R+ Y DA+ RYG DKPDLR  + +  V
Sbjct: 249 FVGEEDVMGIAEQMIAKVFKDVMGKE-VKTPFDRLTYKDAMDRYGLDKPDLRFDLELKEV 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIFW 361
           +     S+F+VF+ ++      +  A+ AKG    +R   D +  +    G  GLA+I  
Sbjct: 308 SSIVEGSDFKVFASVVKKGGMVK--AMNAKGCAHFSRKVIDDLTAFVAVYGAKGLAWIKV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D     +   P+AK        A+   LDM  GD  FF+A +           RN +A
Sbjct: 366 KEDG----SWQSPIAKFFTDDEKAAMAQTLDMAPGDLIFFVADNVKVTNDALGHLRNRVA 421

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +ELG+I+ N F F W+ +FP  E++E +K+    H+PFT P      L  +D  ++++  
Sbjct: 422 KELGLIDENEFRFVWVTEFPLVEYDETDKRYVALHHPFTAPMEEDLDLLESDPGAVRSRA 481

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+  + F+ +G+ +E  E +FG L +A   G PPHGG+A 
Sbjct: 482 YDMVLNGTELGGGSIRIHQPEMQEKVFNMLGLGQEEAEEKFGFLLKALAFGAPPHGGLAF 541

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G DR++MLL G  ++R++  FP +Q    LL  +PS V+ EQL EL LRI ++P
Sbjct: 542 GFDRLIMLLSGENSIRDIIPFPKTQKAACLLTDAPSEVAFEQLAELALRIKKDP 595


>gi|331647463|ref|ZP_08348555.1| aspartate--tRNA ligase [Escherichia coli M605]
 gi|281178936|dbj|BAI55266.1| aspartyl-tRNA synthetase [Escherichia coli SE15]
 gi|330911676|gb|EGH40186.1| aspartyl-tRNA synthetase [Escherichia coli AA86]
 gi|331043187|gb|EGI15325.1| aspartate--tRNA ligase [Escherichia coli M605]
          Length = 590

 Score =  635 bits (1637), Expect = e-180,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGSLRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 588


>gi|104783076|ref|YP_609574.1| aspartyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|123255376|sp|Q1I6E5|SYD_PSEE4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|95112063|emb|CAK16790.1| aspartyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 591

 Score =  634 bits (1636), Expect = e-179,   Method: Composition-based stats.
 Identities = 232/593 (39%), Positives = 337/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRAETFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R    +N N+ +G IE+   ++ +L+ AE  P P+    +  E 
Sbjct: 63  RVRSEYVVQITGKVRKRPEGAVNTNMASGAIEILGYQLNVLNEAETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  +   +  R+RI +S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMADKLRLRSRITSSIRRFLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ +I+   E+++R +F+E  +       F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LDESEIMGLTESMIRKLFKEVLDLEFGE--FPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF+   +             G    R+  D   ++    G  GLAYI    
Sbjct: 300 DQLKDVDFKVFAGPANDPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K++   N   I  R+   DGD  FF A             R  +  +
Sbjct: 360 RAKGVEGLQSPIVKNIPEANLNNILDRVGAVDGDIVFFGADKFKVVSEALGALRIRLGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++ C  +   W++DFP +E NE+       H+PFT P+   E L+ N   +  +  YD
Sbjct: 420 FELLTCE-WAPMWVVDFPMFEENED-GSFTALHHPFTAPKCTPEELEAN-PATALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI     E +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGIEAAEQEEKFGFLLDALKFGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+   ++  +P  V  + LREL +R+ E  K
Sbjct: 537 DRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGLVDAKALRELHIRLREQTK 589


>gi|326390138|ref|ZP_08211699.1| aspartyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325993786|gb|EGD52217.1| aspartyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 592

 Score =  634 bits (1636), Expect = e-179,   Method: Composition-based stats.
 Identities = 246/590 (41%), Positives = 351/590 (59%), Gaps = 10/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTH CG+L V DV   V + GWV R R HGG++F+D+RD  GI QVV + +  S  FE 
Sbjct: 9   KRTHMCGELTVEDVDKSVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFSNEVSSEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +SVRSE+VL I+G V+ R+ E +N  I TG+IE+ A  ++ILS +E  P P+       
Sbjct: 69  VQSVRSEYVLAIEGKVVKRAPENVNPKISTGEIEIYANTLKILSKSETPPFPIEDRSNVS 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR ++ +N++ R +I   +R  +    FIE  TP+L  S+PEGARD+L
Sbjct: 129 EAIRLKYRYLDLRRPSMQQNLMTRFKITKVVRDFLNRNGFIEIETPLLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EM
Sbjct: 189 VPSRIYPGKFYALPQSPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE +D+L   E ++  +F+E    + V   F R+ Y +++ R+GTDKPDLR  + + +
Sbjct: 248 SFVEVEDVLKINEKMIAEIFKETLGID-VPIPFKRLSYQESMERFGTDKPDLRFGMELKD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    SEF VF   L  N       +        R   D + E+A++ G  GL +I  
Sbjct: 307 LSDIVAQSEFNVFKNALKNNGSVRGINVK-GAASMPRRQLDELVEFAKTYGAKGLLWIQV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E        P  K L+    + I  RL+ + GD    +A          A  R  + 
Sbjct: 366 FEKE-----VKSPATKFLSEEEMKKILERLEAEAGDLLLIVADKDEIVFDTLAHLRLELG 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   +I+ N +EF WI+DFP  E++E EK+    H+PFT P+     L   + L ++A  
Sbjct: 421 KRFNLIDENKYEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEPLKVRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H +E+  + F  +G S+E    RFG L  AF+ G PPHGGIA 
Sbjct: 481 YDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFKYGAPPHGGIAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+ M++ G+  +R+V  FP +QN   L+  +PS VS EQL+EL +++
Sbjct: 541 GLDRLAMIITGSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 590


>gi|320657964|gb|EFX25726.1| aspartyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
          Length = 590

 Score =  634 bits (1636), Expect = e-179,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 331/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D  + + +  G  GLAYI    
Sbjct: 297 DLLRSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYDNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIQVVKKAE 588


>gi|307314222|ref|ZP_07593832.1| aspartyl-tRNA synthetase [Escherichia coli W]
 gi|306906191|gb|EFN36709.1| aspartyl-tRNA synthetase [Escherichia coli W]
 gi|315061172|gb|ADT75499.1| aspartyl-tRNA synthetase [Escherichia coli W]
 gi|323378251|gb|ADX50519.1| aspartyl-tRNA synthetase [Escherichia coli KO11]
          Length = 590

 Score =  634 bits (1636), Expect = e-179,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELNAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 588


>gi|312623086|ref|YP_004024699.1| aspartyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203553|gb|ADQ46880.1| aspartyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 594

 Score =  634 bits (1636), Expect = e-179,   Method: Composition-based stats.
 Identities = 225/590 (38%), Positives = 335/590 (56%), Gaps = 9/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  C ++ + DVG  V L+GWV   R  GGIIF+D+RD  GI QVV +        + 
Sbjct: 8   KRTKYCAEVSLDDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+RSE+ + + G+V  R  ET+N  I TG+IE+ A ++ I + +E  P P+       
Sbjct: 68  ADSLRSEYCIGVRGIVEKRPPETVNPKIKTGEIEVRATELRIFNKSETPPFPIEEGINVN 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  + +N++ R ++   +R  +    FIE  TP+LT S+PEGARD+L
Sbjct: 128 EAVRLKYRYLDLRRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G F+ALPQ+PQ +KQLLM +GFDRYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 188 VPSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD++   E +L+ +F E    + +     R+ Y +A+ R+G+DKPD R  + + +
Sbjct: 247 SFVDVDDVIEINEKLLQTIFREMLGID-LKLPLPRLTYKEAMERFGSDKPDTRFGMELVD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+   + EF+VF+   +                 +R   D + E+A++    GLA+I  
Sbjct: 306 ITDIVKNCEFKVFADAANKGGSVRAINAKGCAATFSRREIDALVEFAKNFKAKGLAWIAV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D         P+ K L       I  RL  + GD   F A           + R  IA
Sbjct: 366 ESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKNEIVFDVLGNLRLEIA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +++ + F   W+ +FP +E++EEE +    H+PFT P          D   +++  
Sbjct: 421 RKLNLLDKSKFNLLWVTEFPLFEYSEEEGRFVAKHHPFTSPMDEDLEFLETDPTKVRSKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  E+  + F  +G ++E  ++RFG L  AF+ G PPHGGIA 
Sbjct: 481 YDIVLNGTEIGGGSIRIHSPELQKRMFKALGFTEERAQDRFGFLLEAFKYGTPPHGGIAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR+ MLLLG  ++R+   FP  ++    L  +PS V  +QLREL +++
Sbjct: 541 GFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590


>gi|312877306|ref|ZP_07737273.1| aspartyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795939|gb|EFR12301.1| aspartyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 594

 Score =  634 bits (1636), Expect = e-179,   Method: Composition-based stats.
 Identities = 227/590 (38%), Positives = 337/590 (57%), Gaps = 9/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG++ + DVG  V L+GWV   R  GGIIF+D+RD  GI QVV +        + 
Sbjct: 8   KRTKYCGEVSLEDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+RSE+ + + G+V  R  ET+N  I TG++E+ A ++ I + +E  P P+       
Sbjct: 68  ADSLRSEYCIGVRGIVEKRPPETVNPKIKTGEVEVRATELRIFNKSETPPFPIEEGINVN 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  + +N++ R ++   +R  +    FIE  TP+LT S+PEGARD+L
Sbjct: 128 EAVRLKYRYLDLRRPNMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G F+ALPQ+PQ +KQLLM +GFDRYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 188 VPSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD++   E +L+ +F E    + +     R+ Y +A+ R+G+DKPD R  + + +
Sbjct: 247 SFVDVDDVIEINEKLLQTIFGEMLGID-LKLPLPRLTYKEAMERFGSDKPDTRFGMELVD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+   + EF+VFS   +                 +R   D + E+A++    GLA+I  
Sbjct: 306 ITDIVKNCEFKVFSDAANKGGSVRAINAKGCAATFSRREIDALVEFAKNFRAKGLAWIAV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D         P+ K L       I  RL  + GD   F A           + R  IA
Sbjct: 366 ESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKDEIVFDVLGNLRLEIA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +++ + F   W+++FP +E++EEE +    H+PFT P          D   +K+  
Sbjct: 421 RKLNLLDKSKFNLLWVVEFPLFEYSEEEGRFVAKHHPFTSPMDEDIEFLETDPAKVKSKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  E+  + F  +G ++E  ++RFG L  AF+ G PPHGGIA 
Sbjct: 481 YDIVLNGTEIGGGSIRIHSPEIQKRMFKALGFTEERAQDRFGFLLEAFKYGTPPHGGIAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR+ MLLLG  ++R+   FP  ++    L  +PS V  +QLREL +++
Sbjct: 541 GFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590


>gi|119899528|ref|YP_934741.1| aspartyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|166225317|sp|A1KAJ9|SYD_AZOSB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119671941|emb|CAL95855.1| AspS protein [Azoarcus sp. BH72]
          Length = 599

 Score =  634 bits (1636), Expect = e-179,   Method: Composition-based stats.
 Identities = 228/600 (38%), Positives = 340/600 (56%), Gaps = 6/600 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +  + +   V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 2   RTQYCGQVTAAHLDQIVTLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+VL + G V  R A T NAN+ +G+IE+   +IE+L+ +   P  +  E    E+
Sbjct: 62  SVRNEFVLKMTGKVRRRPAGTENANLTSGEIEVLCHEIEVLNTSATPPFQLDDENLS-ET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + KN++ R ++  + R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPQMQKNLMLRYKVAMAFRRFLDGAGFIDVETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I   ME ++R VF+E    + + + F R+ Y +A+RRYG+DKPDLR  + +  VT
Sbjct: 240 LNETEITALMEEMIRFVFKESLGVD-LPSPFPRMTYAEAMRRYGSDKPDLRVTLELTEVT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +      F+VFS   +         +P  G    R   D   ++    G  GLAYI    
Sbjct: 299 DLMKDVAFKVFSGPANSGGRVAAMRVP-GGATLTRGEIDEYTKFVGIYGAKGLAYIKVND 357

Query: 364 DESGNV-AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               N      P+ K+L+      +  R   Q GD  FF A             R  +  
Sbjct: 358 ASQPNETGLQSPIVKNLSEAALRGVIERTGAQSGDLIFFGADKAKVVNDAIGALRIKLGH 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E G +  + +   W++DFP +E++E++K+    H+PFT P+     L   +     A  Y
Sbjct: 418 EKGYVTGDAWRPLWVVDFPMFEYDEDDKRWTACHHPFTSPKDEHVELLKTNPGECLAKAY 477

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL  NG+EI  G +R H ++V    F  + I  E  + +FG L  A + G PPHGG+A G
Sbjct: 478 DLALNGWEIGGGSVRIHRADVQATVFEALNIGAEEQQVKFGFLLDALKFGAPPHGGLAFG 537

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           +DR+V ++ GA+++R+V  FP +Q    LL  +P  V  +QLREL +R+ +  +  +++ 
Sbjct: 538 LDRVVTMMAGAESIRDVIAFPKTQRAQCLLTNAPGEVDEKQLRELHIRLRQKVETQVEVG 597


>gi|312128270|ref|YP_003993144.1| aspartyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778289|gb|ADQ07775.1| aspartyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 594

 Score =  634 bits (1636), Expect = e-179,   Method: Composition-based stats.
 Identities = 225/590 (38%), Positives = 336/590 (56%), Gaps = 9/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  C ++ + DVG  V L+GWV   R  GGIIF+D+RD  GI QVV +        + 
Sbjct: 8   KRTKYCAEVSLEDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+RSE+ + + G+V  R  ET+N  I TG++E+ A ++ I + +E  P P+       
Sbjct: 68  ADSLRSEYCIGVRGIVEKRPPETVNPKIKTGEVEVRATELRIFNKSETPPFPIEEGINVN 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  + +N++ R ++   +R  +    FIE  TP+LT S+PEGARD+L
Sbjct: 128 EAVRLKYRYLDLRRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G F+ALPQ+PQ +KQLLM +GFDRYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 188 VPSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD++   E +L+ +F E    + +     R+ Y +A+ R+G+DKPD R  + + +
Sbjct: 247 SFVDVDDVIEINEKLLKTIFGEMLGID-LKLPLPRLTYKEAMERFGSDKPDTRFGMELVD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+   + EF+VFS   +                 +R   D + E+A++    GLA+I  
Sbjct: 306 ITDIVKNCEFKVFSDAANKGGSVRAINAKGCAATFSRREIDALVEFAKNFKAKGLAWIAV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D         P+ K L       I  RL  + GD   F A           + R  IA
Sbjct: 366 ESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKDEIVFDVLGNLRLEIA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +++ + F   W+++FP +E++EEE +    H+PFT P          D   +++  
Sbjct: 421 RKLNLLDKSKFNLLWVVEFPLFEYSEEEGRFVAKHHPFTSPMDEDLEYLETDPAKVRSKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  E+  + F  +G ++E  ++RFG L  AF+ G PPHGGIA 
Sbjct: 481 YDIVLNGTEIGGGSIRIHSPEIQKRMFKALGFTEEKAQDRFGFLLEAFKYGTPPHGGIAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR+ MLLLG  ++R+   FP  ++    L  +PS V  +QLREL +++
Sbjct: 541 GFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590


>gi|283832736|ref|ZP_06352477.1| aspartate--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291072419|gb|EFE10528.1| aspartate--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 590

 Score =  634 bits (1636), Expect = e-179,   Method: Composition-based stats.
 Identities = 221/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S  G  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHEGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ ++   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASDLTIINRSDS--LPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRNLWLEVKGVD--LGDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLVKGVEFAVFSGPANDPKGRVAALRVPGGAALSRKQIDDYGNFIKIYGAKGLAYIKVTE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGITSPVAKFLNAEIVEAILARTGAQDGDMIFFGADNKKVVADAMGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I + + +   W++DFP +E ++ E  +   H+PFT P+    +          A  YD
Sbjct: 417 LNITDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPEDAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANEAALAELSIQVVKKAE 588


>gi|293415181|ref|ZP_06657824.1| aspartyl-tRNA synthetase [Escherichia coli B185]
 gi|291432829|gb|EFF05808.1| aspartyl-tRNA synthetase [Escherichia coli B185]
          Length = 590

 Score =  634 bits (1636), Expect = e-179,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIQVVKKAE 588


>gi|146312080|ref|YP_001177154.1| aspartyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166979990|sp|A4WBM3|SYD_ENT38 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145318956|gb|ABP61103.1| aspartyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 590

 Score =  634 bits (1636), Expect = e-179,   Method: Composition-based stats.
 Identities = 221/594 (37%), Positives = 328/594 (55%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L  S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDLRDREGIVQVFFDPDRAEALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + INA++ TG+IE+ A  + I++ +E   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINADMATGEIEVLASDLTIINRSES--LPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKFRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVRELMEALVRSLWLDVKGVD--LGDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKAVEFAVFSGPANDAKGRVAALRVPGGASLSRKQIDDYGNFVKIYGAKGLAYIKVTE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    E+I  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGIEGITSPVAKFLNAEIVESILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + +   +   W++DFP +E ++ E  +   H+PFT  +            +  A  YD
Sbjct: 417 LSLTDEAKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSAKDMNADELKAAPETAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHSGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+ +V+  +K
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLAELGIDVVKKEEK 589


>gi|329115060|ref|ZP_08243815.1| Aspartyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326695503|gb|EGE47189.1| Aspartyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 595

 Score =  634 bits (1635), Expect = e-179,   Method: Composition-based stats.
 Identities = 304/597 (50%), Positives = 394/597 (65%), Gaps = 9/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+HSC  L  SD G+  RLSGWVH  R HGG++F+D+RD  G+TQ+V    S   E
Sbjct: 1   MHPYRSHSCSALRASDAGTTARLSGWVHSKRDHGGLLFIDLRDETGLTQIVIPAGSPVME 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R E V+ + G V+ R   T N ++ TG IE+ A+++ + S A  LPL V G+  Y
Sbjct: 61  TAEHLRVESVITVTGDVVLRDETTRNPDLATGDIEVRARELIVQSSAAVLPLQVAGQEHY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R +YR++DLRR+ +H NI  R+ II SMR RM    F E  TPILTASSPEGARDF
Sbjct: 121 SDELRLRYRYIDLRREQVHANIRLRSAIIASMRRRMTDLGFTEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR + G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRDE  R+DR PGEFYQLD E
Sbjct: 181 LVPSRTHAGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEASRADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEF-SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           M+F  QD+I   +E V+ G+F EF       +  F RI Y  A++ YG+DKPDLRNP+++
Sbjct: 241 MAFATQDEIFAVLEEVMSGLFTEFGKGRAVSTAPFERIPYARAMKVYGSDKPDLRNPLLI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F++I +        AIPA G GG  R+F D++N WAR  G  GL Y
Sbjct: 301 TDVTEDFAGSGFGLFARIAADGGEVR--AIPAPGAGGRPRSFYDKLNAWARENGAGGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +         G GP+AK+L     E IR +L ++ GD+ FF AG       F+   R 
Sbjct: 359 ITF-----AEEGGQGPIAKNLEADRVETIRTKLGLKPGDAVFFAAGKGHDVAKFSGLVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+EL +I  + F FCWI DFP YE NEE   IDF+HNPF+MPQGG+E+L   + L I 
Sbjct: 414 RIAEELDLIEKDAFRFCWITDFPMYELNEETGLIDFSHNPFSMPQGGLEALNTKNPLDIL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH+ +VM++AF   G  +  VE RFGG+  AF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIELSSGAIRNHLPDVMIRAFEIAGYPESEVEARFGGMLNAFRYGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            A G+DRIVMLL    N+REV LFP++Q   DL+MG+P+ V  E+L+EL L +   P
Sbjct: 534 SAPGVDRIVMLLADEPNIREVILFPLNQQGEDLMMGAPAPVPPERLKELSLALNLKP 590


>gi|157145355|ref|YP_001452674.1| aspartyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|166225337|sp|A8AFH5|SYD_CITK8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157082560|gb|ABV12238.1| hypothetical protein CKO_01095 [Citrobacter koseri ATCC BAA-895]
          Length = 590

 Score =  634 bits (1635), Expect = e-179,   Method: Composition-based stats.
 Identities = 221/593 (37%), Positives = 331/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + +NA++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNVNADMATGEIEVLASDLTIINRADS--LPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R +++E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWQEVKGVD--LGDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLSRKQIDDYGNFIKIYGAKGLAYIKVTE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIVEAILDRTAAQDGDMIFFGADNKKVVADALGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + +   +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LNLTDEAKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDLTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHSGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+ +V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELGIDVVKKAE 588


>gi|219669604|ref|YP_002460039.1| aspartyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219539864|gb|ACL21603.1| aspartyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 592

 Score =  634 bits (1635), Expect = e-179,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 337/593 (56%), Gaps = 9/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT S G L +S  G+ + L GWV R R HGG+IF+D+RD  G  QVV NPD   F  A+ 
Sbjct: 7   RTES-GSLRLSHAGAVIHLLGWVQRRRDHGGVIFVDLRDRSGFVQVVFNPDMPDFAAAER 65

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+ I G V  R     N N+ TG+IE+ A+ + IL+ A+  P  +  + +  E +
Sbjct: 66  LRSEYVVAIKGKVRPRPEGATNPNLETGEIEVVAESLTILNGAKTPPFYIQDDVDVDEMV 125

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  + +    R ++   MR    ++ F E  TP+L  SSPEGARD+LVPS
Sbjct: 126 RLKYRYLDLRRPEMQQVFKIRHQVTQVMRNFFDSQGFYEIETPMLIKSSPEGARDYLVPS 185

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ G FYALPQ+PQ +KQLLM SG ++YFQI  CFRDED R+DR P EF QLD+EMSF 
Sbjct: 186 RVHPGEFYALPQSPQIFKQLLMVSGMEKYFQIVRCFRDEDLRADRQP-EFTQLDVEMSFA 244

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           E +DIL  ME ++  +F+E    +     F R+ Y +A+  YG+DKPD+R  + M +V E
Sbjct: 245 EVEDILPMMEELMARIFKETIGRDI-PRPFPRMTYQEAMELYGSDKPDIRFGMEMVDVAE 303

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
               S F+VF+  L+     +        G   R   D + ++    G  GLAYI     
Sbjct: 304 CVKDSNFKVFTDTLAKGGRVKALCAKGCAG-MPRRELDGLIQFVSIYGAKGLAYIVL--- 359

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
                    P+AK  +      +  +L  + GD  FF+A             R  + + L
Sbjct: 360 --AEEGIKSPIAKFFSEEQLNGLIAKLKGETGDILFFVADKEAVVADALGHLRLELGKRL 417

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G+I  +   F W+ +FP  +W+EE+K+    H+PFT P      L   +   ++A  YD+
Sbjct: 418 GLIPEDALNFLWVTEFPLLQWDEEDKRFVAIHHPFTSPMTEDLPLLPTEPGKVRAKAYDM 477

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG E+  G IR H  EV  Q F  +G++ E  + +FG L  AF+ G PPHGGIA G+D
Sbjct: 478 VLNGTELGGGSIRIHQREVQEQMFDLLGLTPEEAKAKFGYLLDAFEYGTPPHGGIAFGLD 537

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           R++MLL G  N+R+V  FP +Q+  DL++ +PS+V  +QL+EL ++    P K
Sbjct: 538 RLIMLLTGKDNIRDVIAFPKTQSASDLMIQAPSSVDEKQLKELHIKRDILPGK 590


>gi|332528585|ref|ZP_08404567.1| aspartyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332041901|gb|EGI78245.1| aspartyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 597

 Score =  634 bits (1635), Expect = e-179,   Method: Composition-based stats.
 Identities = 224/596 (37%), Positives = 335/596 (56%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD    F++A+
Sbjct: 4   RSHYCGLVTEALLGQTVTLCGWVNRRRDHGGVIFVDLRDREGYVQVVCDPDRPEMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + GLV +R A T N  + +G+IE+   ++ +L+ +   P  +  E    E+
Sbjct: 64  DLRNEFCVQVKGLVRARPAGTTNDGLKSGKIEVLCHELTVLNPSVTPPFQLDDENLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N++ R R+   +R  + A  FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPYMQNNLMLRYRVAMEVRKFLDANGFIDVETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRVHDGMFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + DI +  + +++ VF+     +     F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LTEQDIRDMFQGMIKTVFQNVLGIDLGE--FPVMAYSEAMHRFGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS       G  V      GG  +R   D   E+ +  G  GLA+I    
Sbjct: 300 DVMKDVDFKVFSTPAQAKGGRVVALRVPGGGEMSRGEIDGYTEFVKIYGAKGLAWIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+L+      I  R   +DGD  FF A             R  I   
Sbjct: 360 VAKGRDGLQSPIVKNLHDAAIAEILKRTGAKDGDLIFFGADKAKIVNDSIGALRIKIGHS 419

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              ++ G+     +   W++DFP +E++E+E++    H+PFT P+ G E     D     
Sbjct: 420 EFGKKSGLFEA-RWAPMWVVDFPMFEYDEDEQRWSAVHHPFTAPKDGHEDWMVTDPEKCI 478

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R H ++V  + F  + I  +    +FG L  A Q G PPHGG
Sbjct: 479 AKGYDMVLNGWEIGGGSVRIHRADVQAKVFDALKIGPDEQRLKFGFLLDALQYGAPPHGG 538

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DRIV L+ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+   
Sbjct: 539 LAFGLDRIVTLMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRLRNQ 594


>gi|312794170|ref|YP_004027093.1| aspartyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181310|gb|ADQ41480.1| aspartyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 594

 Score =  634 bits (1635), Expect = e-179,   Method: Composition-based stats.
 Identities = 226/590 (38%), Positives = 337/590 (57%), Gaps = 9/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG++ + DVG  V L+GWV   R  GGIIF+D+RD  GI QVV +        + 
Sbjct: 8   KRTKYCGEVSLEDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+RSE+ + + G+V  R  ET+N  I TG++E+ A ++ I + +E  P P+       
Sbjct: 68  ADSLRSEYCIGVRGIVEKRPPETVNPKIKTGEVEVRATELRIFNKSETPPFPIEEGINVN 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  + +N++ R ++   +R  +    FIE  TP+LT S+PEGARD+L
Sbjct: 128 EAVRLKYRYLDLRRPNMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G F+ALPQ+PQ +KQLLM +GFDRYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 188 VPSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD++   E +L+ +F E    + +     R+ Y +A+ R+G+DKPD R  + + +
Sbjct: 247 SFVDVDDVIEINEKLLQTIFGEMLGID-LKLPLPRLTYKEAMERFGSDKPDTRFGMELVD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+   + EF+VFS   +                 +R   D + E+A++    GLA+I  
Sbjct: 306 ITDIVKNCEFKVFSDAANKGGSVRAINAKGCAATFSRREIDALVEFAKNFRAKGLAWIAV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D         P+ K L       I  RL  + GD   F A           + R  IA
Sbjct: 366 ESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKDEIVFDVLGNLRLEIA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +++ + F   W+++FP +E++EEE +    H+PFT P          D   +++  
Sbjct: 421 RKLNLLDKSKFNLLWVVEFPLFEYSEEEGRFVAKHHPFTSPMDEDIEFLETDPARVRSKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  E+  + F  +G ++E  ++RFG L  AF+ G PPHGGIA 
Sbjct: 481 YDIVLNGTEIGGGSIRIHSPEIQKRMFKALGFTEERAQDRFGFLLEAFKYGTPPHGGIAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR+ MLLLG  ++R+   FP  ++    L  +PS V  +QLREL +++
Sbjct: 541 GFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590


>gi|168747893|ref|ZP_02772915.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168757900|ref|ZP_02782907.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168770849|ref|ZP_02795856.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168776587|ref|ZP_02801594.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168783166|ref|ZP_02808173.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168789731|ref|ZP_02814738.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168801898|ref|ZP_02826905.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208810475|ref|ZP_03252351.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208816661|ref|ZP_03257781.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208819532|ref|ZP_03259852.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209396974|ref|YP_002270949.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|254793490|ref|YP_003078327.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261227633|ref|ZP_05941914.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258201|ref|ZP_05950734.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291283048|ref|YP_003499866.1| Aspartyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|238064706|sp|B5YR11|SYD_ECO5E RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|187768045|gb|EDU31889.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188017525|gb|EDU55647.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188999463|gb|EDU68449.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189355183|gb|EDU73602.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189360301|gb|EDU78720.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189370643|gb|EDU89059.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189376046|gb|EDU94462.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208724991|gb|EDZ74698.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208731004|gb|EDZ79693.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208739655|gb|EDZ87337.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209158374|gb|ACI35807.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209767418|gb|ACI82021.1| aspartate tRNA synthetase [Escherichia coli]
 gi|209767422|gb|ACI82023.1| aspartate tRNA synthetase [Escherichia coli]
 gi|209767424|gb|ACI82024.1| aspartate tRNA synthetase [Escherichia coli]
 gi|209767426|gb|ACI82025.1| aspartate tRNA synthetase [Escherichia coli]
 gi|254592890|gb|ACT72251.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290762921|gb|ADD56882.1| Aspartyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320641720|gb|EFX11108.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320647080|gb|EFX15913.1| aspartyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320652363|gb|EFX20661.1| aspartyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320658537|gb|EFX26231.1| aspartyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668435|gb|EFX35262.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
          Length = 590

 Score =  634 bits (1635), Expect = e-179,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLRSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIQVVKKAE 588


>gi|167040111|ref|YP_001663096.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300914196|ref|ZP_07131512.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307724569|ref|YP_003904320.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|238687551|sp|B0K0N5|SYD_THEPX RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166854351|gb|ABY92760.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300889131|gb|EFK84277.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307581630|gb|ADN55029.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 592

 Score =  634 bits (1635), Expect = e-179,   Method: Composition-based stats.
 Identities = 247/590 (41%), Positives = 352/590 (59%), Gaps = 10/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTH CG+L V DV  +V + GWV R R HGG++F+D+RD  GI QVV + +  S  FE 
Sbjct: 9   KRTHMCGELTVEDVDKYVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFSNEVSSEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +SVRSE+VL I+G V+ RS E +N  I TG+IE+ A  ++ILS +E  P P+       
Sbjct: 69  VQSVRSEYVLAIEGKVVKRSPENVNPKISTGEIEIYANTLKILSKSETPPFPIEDRSNVS 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR ++ KN++ R +I   +R  +    FIE  TP+L  S+PEGARD+L
Sbjct: 129 EAVRLKYRYLDLRRPSMQKNLMTRFKITKVVRDFLNKNGFIEIETPLLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EM
Sbjct: 189 VPSRIYPGKFYALPQSPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE +D+L   E ++  +F+E    + V   F R+ Y +++ R+GTDKPDLR  + + +
Sbjct: 248 SFVEVEDVLKINEKMIAEIFKETLGID-VPIPFKRLSYQESMERFGTDKPDLRFGMELKD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    SEF VF   L  N       +        R   D + E+A++ G  GL +I  
Sbjct: 307 LSDIVAQSEFNVFKTALKNNGSVRGINVK-GAASMPRRQLDELVEFAKTYGAKGLLWIQV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E        P  K L+    + I  RL+ + GD    +A          A  R  + 
Sbjct: 366 FEKE-----VKSPATKFLSEEEMKKILERLEAEAGDLLLIVADKDEIVFDTLAHLRLELG 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   +I+ N +EF WI+DFP  E++E EK+    H+PFT P+     L   + L ++A  
Sbjct: 421 KRFNLIDENKYEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEPLKVRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H +E+  + F  +G S+E    RFG L  AF+ G PPHGGIA 
Sbjct: 481 YDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFKYGAPPHGGIAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+ M++ G+  +R+V  FP +QN   L+  +PS VS EQL+EL +++
Sbjct: 541 GLDRLAMIITGSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 590


>gi|218887128|ref|YP_002436449.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758082|gb|ACL08981.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 614

 Score =  634 bits (1635), Expect = e-179,   Method: Composition-based stats.
 Identities = 241/594 (40%), Positives = 346/594 (58%), Gaps = 14/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H C  L  +D G+ V L GWV   R HGG+IF+D+RD  G+TQ+V +PD   A  E A
Sbjct: 24  RSHDCATLTAADTGAEVCLMGWVQYRRDHGGLIFVDLRDRQGLTQIVFSPDVNPAAHERA 83

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+VL I G V  R     N  + TG+IE+   + ++L+ ++     +    E  E
Sbjct: 84  HIIRSEYVLAIRGTVRPRPEGMTNPGMKTGEIEVYVSEWKLLNTSKTPAFVIEDRTEASE 143

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YR+LDLRR  +  N + R +   + R  +    F+E  TP LT S+PEGARDFLV
Sbjct: 144 NLRLQYRYLDLRRPRMANNFIVRHKAAQATRRYLDELGFLEIETPYLTKSTPEGARDFLV 203

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+NQG FYALPQ+PQ +KQLLM SG +RY+QI  CFRDED R+DR   EF Q+D+EMS
Sbjct: 204 PSRLNQGQFYALPQSPQLFKQLLMMSGMERYYQIVRCFRDEDMRADRQL-EFTQIDIEMS 262

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ ++   E ++  VF +  +    +  F R+ YDDA+ RYG DKPD R  + + +V
Sbjct: 263 FVDEEQVMAMAEGLMARVFRDALDREI-ATPFPRMSYDDAMARYGVDKPDTRFGLELQDV 321

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T     S F++F+    V            G    R   D   E+ +  G  GLA+I  R
Sbjct: 322 THIVRGSNFKLFATAELVK-----AMRVPGGETMTRKEIDEFTEFVKIYGAQGLAWIKIR 376

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            DE        P+AK L+      ++  L ++ GD  FF AG P    +   + R  + +
Sbjct: 377 PDE-----WQSPIAKFLSDEERAGLKDALGLETGDIVFFQAGAPGMVNAALGNLRVRLGE 431

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            LG+I+ N F F W+ DFP +E++EEEK+    H+PFT P+ G   +   +  + +A  Y
Sbjct: 432 HLGLIDENAFNFLWVTDFPLFEYDEEEKRYVACHHPFTSPKDGHMDVMVENPAAARARAY 491

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IRNH +E   + F+ +G S E  E +FG L +A + G PPHGGIA G
Sbjct: 492 DMVLNGYELGGGSIRNHTAEKQRRMFAALGFSPEEAEAQFGFLTQALEMGAPPHGGIAFG 551

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR+ MLL G+ ++R+V  FP +Q    LL  +P +VS  QLR+LGLR+ E  K
Sbjct: 552 MDRLAMLLTGSSSIRDVIAFPKTQKATCLLTQAPDSVSARQLRDLGLRLRETGK 605


>gi|253688202|ref|YP_003017392.1| aspartyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511866|sp|C6DFE7|SYD_PECCP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|251754780|gb|ACT12856.1| aspartyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 598

 Score =  634 bits (1635), Expect = e-179,   Method: Composition-based stats.
 Identities = 223/603 (36%), Positives = 336/603 (55%), Gaps = 7/603 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT+ CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F++A 
Sbjct: 2   RTNYCGQLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQLTGVVRARPESQINKDMATGEVEIFANALTIVNRSE--ALPLDSNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R RI + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRARITSFVRRFMDEHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLVRELWLDVKGVD--LGDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + +F+VFS   +   G         G   +R   D   ++    G  GLAYI    
Sbjct: 297 DLVKNIDFKVFSGPANDAKGRVAAIRVPGGAQLSRKQIDEYGKFIEIYGAKGLAYIKLNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN     A+  R   QDGD  FF A             R  + ++
Sbjct: 357 RAKGLEGVQSPVAKFLNADMLSALLDRTAAQDGDILFFGADSAKVVTDALGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   + +E  W++DFP +E +  E  +   H+PFT P+  + S    + +S  A  YD
Sbjct: 417 LSLTKDDSWEPLWVVDFPMFEED-GEGGLAAMHHPFTAPRDMLPSELAANPVSAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    FS +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFSILGITEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISV 603
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V   K       
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLEELAIAVVVKGKAAQDGKS 595

Query: 604 TTI 606
              
Sbjct: 596 ENE 598


>gi|290475273|ref|YP_003468161.1| aspartate tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289174594|emb|CBJ81388.1| aspartate tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 589

 Score =  634 bits (1635), Expect = e-179,   Method: Composition-based stats.
 Identities = 219/592 (36%), Positives = 333/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L ++  G  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    F  A 
Sbjct: 2   RTNYCGQLSLAHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQKEAFAQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G+V +R    IN  + TG++E+ A  + + + +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGIVRARPDSQINKEMATGEVEVFADSLMVFNRSEP--LPLDSNQNNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R ++ N +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSLRLKTRAKVTNFVRRFMDNAGFLDVETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   MEN++R ++ +  N +     F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREIMENMIRELWLDARNVD--LGKFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF VF++  +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DLVKNVEFAVFAEPANDPKGRVATICVPGGAELSRKQIDEYGKFVGIYGAKGLAWMKVNN 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L+    E +  R + QDGD  FF A             R  + ++
Sbjct: 357 RAAGLEGVQSPVAKFLSAEVVEGLLSRTNAQDGDILFFGADKKNVVTDAMGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I +   ++  W++DFP +E +  E  +   H+PFT P     +   +D  S  A  YD
Sbjct: 417 LNITDLASWKPLWVIDFPMFE-DNGEGGLHAMHHPFTSPCDMSATELEHDPESAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI++E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRNEMQQVVFRILGITEEEQQEKFGFLLNALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL    N+R+V  FP +     L+  +PS  +   L EL + +V+  
Sbjct: 536 DRLVMLLTDTDNIRDVIAFPKTTAAACLMTEAPSYANPASLEELAISVVKKE 587


>gi|50121421|ref|YP_050588.1| aspartyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|62287553|sp|Q6D497|SYD_ERWCT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|49611947|emb|CAG75396.1| aspartyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 599

 Score =  634 bits (1634), Expect = e-179,   Method: Composition-based stats.
 Identities = 223/603 (36%), Positives = 334/603 (55%), Gaps = 7/603 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT+ CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F++A 
Sbjct: 3   RTNYCGQLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFKLAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 63  ELRNEFCIQLTGVVRARPESQINKDMATGEVEIFANALTIVNRSE--ALPLDSNQTNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLRR  + + +  R RI + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 ARLKFRYLDLRRPEMAQRLKTRARITSFVRRFMDDHGFMDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 240 MTAPQVREVMEQLVRELWLDVKGVD--LGDFPVMTFAEAMRRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLLKDIEFKVFSGPANDAKGRVAAIRVPGGSQLSRKQIDEYGKFIEIYGAKGLAYIKVNE 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L+     A+  R   QDGD  FF A             R  + ++
Sbjct: 358 RAKGLEGVQSPVAKFLSEDVLSALLDRTAAQDGDILFFGADSAKVVTDALGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   N +E  W++DFP +E +  E  +   H+PFT P+  + S    + +S  A  YD
Sbjct: 418 LNLTKNNSWEPLWVVDFPMFEED-GEGGLSAMHHPFTAPRDMLPSELAANPVSAIANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIHSGEMQQTVFRILGITEQEQREKFGFLLDALKYGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISV 603
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V   K       
Sbjct: 537 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLEELAIAVVVKGKAAQDGKS 596

Query: 604 TTI 606
              
Sbjct: 597 ENE 599


>gi|167037449|ref|YP_001665027.1| aspartyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115863|ref|YP_004186022.1| aspartyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|238687695|sp|B0K978|SYD_THEP3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166856283|gb|ABY94691.1| aspartyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928954|gb|ADV79639.1| aspartyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 592

 Score =  634 bits (1634), Expect = e-179,   Method: Composition-based stats.
 Identities = 246/590 (41%), Positives = 351/590 (59%), Gaps = 10/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTH CG+L V DV   V + GWV R R HGG++F+D+RD  GI QVV + +  S  FE 
Sbjct: 9   KRTHMCGELTVEDVDKSVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFSNEVSSEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +SVRSE+VL I+G V+ R+ E +N  I TG+IE+ A  ++ILS +E  P P+       
Sbjct: 69  VQSVRSEYVLAIEGKVVKRAPENVNPKISTGEIEIYANTLKILSKSETPPFPIEDRSNVS 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR ++ +N++ R +I   +R  +    FIE  TP+L  S+PEGARD+L
Sbjct: 129 EAIRLKYRYLDLRRPSMQQNLMTRFKITKVVRDFLNRNGFIEIETPLLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EM
Sbjct: 189 VPSRIYPGKFYALPQSPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE +D+L   E ++  +F+E    + V   F R+ Y +++ R+GTDKPDLR  + + +
Sbjct: 248 SFVEVEDVLKINEKMIAEIFKETLGID-VPIPFKRLSYQESMERFGTDKPDLRFGMELKD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    SEF VF   L  N       +        R   D + E+A++ G  GL +I  
Sbjct: 307 LSDIVAQSEFNVFKTALKNNGSVRGINVK-GAASMPRRQLDELVEFAKTYGAKGLLWIQV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E        P  K L+    + I  RL+ + GD    +A          A  R  + 
Sbjct: 366 FEKE-----VKSPATKFLSEEEMKKILERLEAEAGDLLLIVADKDEIVFDTLAHLRLELG 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   +I+ N +EF WI+DFP  E++E EK+    H+PFT P+     L   + L ++A  
Sbjct: 421 KRFNLIDENKYEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEPLKVRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H +E+  + F  +G S+E    RFG L  AF+ G PPHGGIA 
Sbjct: 481 YDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFKYGAPPHGGIAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+ M++ G+  +R+V  FP +QN   L+  +PS VS EQL+EL +++
Sbjct: 541 GLDRLAMIITGSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 590


>gi|322832431|ref|YP_004212458.1| aspartyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321167632|gb|ADW73331.1| aspartyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 598

 Score =  634 bits (1634), Expect = e-179,   Method: Composition-based stats.
 Identities = 228/603 (37%), Positives = 337/603 (55%), Gaps = 9/603 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L  S+VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    +++A 
Sbjct: 2   RTVYCGKLNASNVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQAEAYKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R     N ++ TG++E+ A  + I++ +E   LP+       E 
Sbjct: 62  ELRNEFCIQLTGTVRARPESQFNKDMATGEVEVFASNLNIINRSES--LPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M + +F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMANRLKARAKITSFVRRFMDSHDFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME + R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ M +V 
Sbjct: 239 MSAEQVREVMEKLARELWQEVKGVD--LGDFPIMTFAEAMRRYGSDKPDLRNPMEMVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF+VF+   +   G         G   +R   D   ++    G  GLAYI    
Sbjct: 297 DLMKNIEFKVFADPANDPKGRVAALRVPGGASLSRKQIDEYAKFIEIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN     A+  R   QDGD  FF A             R  + ++
Sbjct: 357 VAKGLEGIQSPVAKFLNEELLAALIARTGAQDGDMIFFGAAGAKIVTDAIGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I   + +   W++DFP +E + +E  +   H+PFT P+         + +S  A  YD
Sbjct: 417 LKITKEDMWAPLWVIDFPMFE-DTDEGGLSAMHHPFTAPKDMSAEELAANPVSAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H SE+    FS +GI++     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRSEMQQTVFSILGINEHEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISV 603
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L ELG+ +V   KK +    
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLLELGIAVV--AKKEVTPDT 593

Query: 604 TTI 606
            T 
Sbjct: 594 NTE 596


>gi|320160675|ref|YP_004173899.1| aspartyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319994528|dbj|BAJ63299.1| aspartyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 593

 Score =  634 bits (1634), Expect = e-179,   Method: Composition-based stats.
 Identities = 253/596 (42%), Positives = 356/596 (59%), Gaps = 8/596 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YRTH+CG+L  + +G  V L+GWVHR R HGGI F+D+RD YGI Q+VANP      + 
Sbjct: 1   MYRTHTCGELRPAHIGQTVTLAGWVHRQRDHGGITFIDLRDRYGIVQIVANPSDPKVAVI 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +S R+EWVL + G+V  R     N N+ TG IE+  Q+ E+L+ A+ LP  V  + E  E
Sbjct: 61  QSARAEWVLQVKGVVRHRPEGAENPNLPTGDIEVEVQECEVLNPAKPLPFLVNKDEEVDE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LDLRR+ + +N++ R +++  +R  +  + FIE  TPIL  ++PEGARD+LV
Sbjct: 121 SVRLKYRYLDLRRERMQRNLILRHKVVKFIRDYLDQQGFIEVETPILFKTTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQQ KQLLM SG DRYFQIA CFRDED R DR P EF QLD+EMS
Sbjct: 181 PSRVHPGMFYALPQSPQQLKQLLMVSGVDRYFQIARCFRDEDLRGDRQP-EFTQLDLEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTV-SNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           FV++DD+LN +E +   +    +    + S+ + ++ Y +A+ RYGTDKPDLR  + +H+
Sbjct: 240 FVQRDDVLNMVEGLFTAMIPAVAPHKRLLSSPWPKLTYREAVERYGTDKPDLRFGMELHD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            +  F +S F VF   L      +    P+      R   D +  +A+ QG  GLA +  
Sbjct: 300 CSAIFANSSFMVFQNTLKNGGVIKCIVAPSC-AEYTRKEVDDLTTFAKEQGAKGLATLAL 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                      G   K +     EA++     + GD   FIA             R    
Sbjct: 359 TA-----EGVKGTAQKFITPGEVEALQALTGAKTGDLVLFIADTREVANKTLGALRLLFR 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             L + N +   F W++DFP +EWNEEEKK D AH+PFTMP+         D  SI +  
Sbjct: 414 DRLKLANKDVLAFAWVVDFPMFEWNEEEKKWDAAHHPFTMPKMEDLDKFDTDPASILSDA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+VCNG+E+ASG IR H  ++  + F  +G+ +E ++ +FG +  AF+ G PPHGG+A 
Sbjct: 474 YDMVCNGYEMASGSIRIHRRDIQFKIFQLLGLKEEDIQRKFGHMLEAFEYGAPPHGGMAP 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           GIDR+VMLL    N+REV  FP +Q   DL+  +PS  + +QL+EL +R+    ++
Sbjct: 534 GIDRLVMLLADEPNIREVIAFPKNQAARDLMADAPSPATEKQLQELHIRVELPEEE 589


>gi|82543705|ref|YP_407652.1| aspartyl-tRNA synthetase [Shigella boydii Sb227]
 gi|157155835|ref|YP_001463169.1| aspartyl-tRNA synthetase [Escherichia coli E24377A]
 gi|170019789|ref|YP_001724743.1| aspartyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|170682211|ref|YP_001743378.1| aspartyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187733090|ref|YP_001879756.1| aspartyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|191168067|ref|ZP_03029866.1| aspartyl-tRNA synthetase [Escherichia coli B7A]
 gi|193066060|ref|ZP_03047117.1| aspartyl-tRNA synthetase [Escherichia coli E22]
 gi|193069878|ref|ZP_03050827.1| aspartyl-tRNA synthetase [Escherichia coli E110019]
 gi|194429644|ref|ZP_03062162.1| aspartyl-tRNA synthetase [Escherichia coli B171]
 gi|194433940|ref|ZP_03066212.1| aspartyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|209919233|ref|YP_002293317.1| aspartyl-tRNA synthetase [Escherichia coli SE11]
 gi|218554454|ref|YP_002387367.1| aspartyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218695432|ref|YP_002403099.1| aspartyl-tRNA synthetase [Escherichia coli 55989]
 gi|218705367|ref|YP_002412886.1| aspartyl-tRNA synthetase [Escherichia coli UMN026]
 gi|256017930|ref|ZP_05431795.1| aspartyl-tRNA synthetase [Shigella sp. D9]
 gi|260844209|ref|YP_003221987.1| aspartyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260855806|ref|YP_003229697.1| aspartyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260868401|ref|YP_003234803.1| aspartyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|293410178|ref|ZP_06653754.1| aspartyl-tRNA synthetase [Escherichia coli B354]
 gi|293446253|ref|ZP_06662675.1| aspartyl-tRNA synthetase [Escherichia coli B088]
 gi|298381003|ref|ZP_06990602.1| aspartyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300816242|ref|ZP_07096464.1| aspartyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300899116|ref|ZP_07117399.1| aspartyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300917557|ref|ZP_07134212.1| aspartyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|301018298|ref|ZP_07182807.1| aspartyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|309794247|ref|ZP_07688671.1| aspartyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|331653275|ref|ZP_08354280.1| aspartate--tRNA ligase [Escherichia coli M718]
 gi|331663363|ref|ZP_08364273.1| aspartate--tRNA ligase [Escherichia coli TA143]
 gi|331668561|ref|ZP_08369409.1| aspartate--tRNA ligase [Escherichia coli TA271]
 gi|331673396|ref|ZP_08374164.1| aspartate--tRNA ligase [Escherichia coli TA280]
 gi|331677747|ref|ZP_08378422.1| aspartate--tRNA ligase [Escherichia coli H591]
 gi|331683372|ref|ZP_08383973.1| aspartate--tRNA ligase [Escherichia coli H299]
 gi|332278964|ref|ZP_08391377.1| aspartyl-tRNA synthetase [Shigella sp. D9]
 gi|97196865|sp|Q322D4|SYD_SHIBS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166979741|sp|A7ZMZ0|SYD_ECO24 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189082097|sp|B1J0M2|SYD_ECOLC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226736538|sp|B7M2F7|SYD_ECO8A RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226736539|sp|B7NBL7|SYD_ECOLU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226736540|sp|B1LD05|SYD_ECOSM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238064707|sp|B6IBU5|SYD_ECOSE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238691719|sp|B2TXL2|SYD_SHIB3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781732|sp|B7L7R9|SYD_ECO55 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|81245116|gb|ABB65824.1| aspartate tRNA synthetase [Shigella boydii Sb227]
 gi|157077865|gb|ABV17573.1| aspartyl-tRNA synthetase [Escherichia coli E24377A]
 gi|169754717|gb|ACA77416.1| aspartyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|170519929|gb|ACB18107.1| aspartyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187430082|gb|ACD09356.1| aspartyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|190901865|gb|EDV61615.1| aspartyl-tRNA synthetase [Escherichia coli B7A]
 gi|192926297|gb|EDV80934.1| aspartyl-tRNA synthetase [Escherichia coli E22]
 gi|192956778|gb|EDV87232.1| aspartyl-tRNA synthetase [Escherichia coli E110019]
 gi|194412286|gb|EDX28590.1| aspartyl-tRNA synthetase [Escherichia coli B171]
 gi|194417812|gb|EDX33909.1| aspartyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|195182928|dbj|BAG66496.1| aspartate tRNA synthetase [Escherichia coli O111:H-]
 gi|209912492|dbj|BAG77566.1| aspartyl-tRNA synthase [Escherichia coli SE11]
 gi|218352164|emb|CAU97903.1| aspartyl-tRNA synthetase [Escherichia coli 55989]
 gi|218361222|emb|CAQ98806.1| aspartyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218432464|emb|CAR13357.1| aspartyl-tRNA synthetase [Escherichia coli UMN026]
 gi|257754455|dbj|BAI25957.1| aspartyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257759356|dbj|BAI30853.1| aspartyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257764757|dbj|BAI36252.1| aspartyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|291323083|gb|EFE62511.1| aspartyl-tRNA synthetase [Escherichia coli B088]
 gi|291470646|gb|EFF13130.1| aspartyl-tRNA synthetase [Escherichia coli B354]
 gi|298278445|gb|EFI19959.1| aspartyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300357273|gb|EFJ73143.1| aspartyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300399734|gb|EFJ83272.1| aspartyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300415211|gb|EFJ98521.1| aspartyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300530932|gb|EFK51994.1| aspartyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|308122152|gb|EFO59414.1| aspartyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|323948248|gb|EGB44236.1| aspartyl-tRNA synthetase [Escherichia coli H120]
 gi|324018009|gb|EGB87228.1| aspartyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|324118926|gb|EGC12815.1| aspartyl-tRNA synthetase [Escherichia coli E1167]
 gi|331049373|gb|EGI21445.1| aspartate--tRNA ligase [Escherichia coli M718]
 gi|331059162|gb|EGI31139.1| aspartate--tRNA ligase [Escherichia coli TA143]
 gi|331063755|gb|EGI35666.1| aspartate--tRNA ligase [Escherichia coli TA271]
 gi|331069594|gb|EGI40981.1| aspartate--tRNA ligase [Escherichia coli TA280]
 gi|331074207|gb|EGI45527.1| aspartate--tRNA ligase [Escherichia coli H591]
 gi|331079587|gb|EGI50784.1| aspartate--tRNA ligase [Escherichia coli H299]
 gi|332095228|gb|EGJ00255.1| aspartyl-tRNA synthetase [Shigella dysenteriae 155-74]
 gi|332101316|gb|EGJ04662.1| aspartyl-tRNA synthetase [Shigella sp. D9]
          Length = 590

 Score =  634 bits (1634), Expect = e-179,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 588


>gi|300863909|ref|ZP_07108827.1| Aspartyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300338095|emb|CBN53973.1| Aspartyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 595

 Score =  634 bits (1634), Expect = e-179,   Method: Composition-based stats.
 Identities = 245/601 (40%), Positives = 351/601 (58%), Gaps = 17/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG L    +G  V L GWV R R HGG+IFLD+RD  G+ Q+V++P      +E A
Sbjct: 2   RTHYCGQLLSDRIGETVTLCGWVDRRRDHGGVIFLDLRDRTGLVQIVSDPQRTPTSYEAA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP- 121
             +RSE+V+ I G V  R  +++N  + TG++E+ A +IE+L+   +         E   
Sbjct: 62  DHLRSEYVVRITGKVTRRPEDSLNPKLATGEVEVYAHEIELLNAVRKQLPFQVSTAETES 121

Query: 122 --ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRRD + +N+  R +++ ++R  +  AENFIE  TPILT S+PEGAR
Sbjct: 122 VREDLRLKYRYLDLRRDRMSRNLQLRHQVVKAIRRHLEDAENFIEVETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G +YALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGEWYALPQSPQLFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+  ++IL   E +   +F+     +     F R+ Y +A+ RYG+DKPD R  + 
Sbjct: 241 MEMSFMSLEEILELNEGLTCHIFKTVKGIDLH-LPFPRLTYAEAMGRYGSDKPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V++    S F+VFS  ++     +V  IP      +         + + A   G  G
Sbjct: 300 LVDVSDLMKDSGFKVFSGAVASGGIVKVLPIPGGNDAISNVRIKPGGDLFKEANEAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI  R+ ++G +  +G +  +L     + +  R   + G    F AGD          
Sbjct: 360 LAYI--RVRDNGEIDTIGAIKDNLKEEQKQELLTRTGAEPGHLLLFGAGDAPTVNKTLDR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  + QELG+I+ +     W+ DFP +EWN +EK+++  H+PFT P         NDL 
Sbjct: 418 LRLAVGQELGLIDKDKMNLLWVTDFPMFEWNADEKRLEALHHPFTAPHPDDI----NDLK 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NG E+  G  R +  E+  + F  +G+S E   N+FG L  AF+ G PP
Sbjct: 474 TARAQAYDLVLNGTEVGGGSRRIYQREIQEKVFEAIGLSTEEAYNKFGFLLDAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +PS V  +QL+EL ++    P
Sbjct: 534 HGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQAGCLLTNAPSGVDDKQLKELHVQSTAKP 593

Query: 596 K 596
           K
Sbjct: 594 K 594


>gi|146295716|ref|YP_001179487.1| aspartyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145409292|gb|ABP66296.1| aspartyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 595

 Score =  634 bits (1634), Expect = e-179,   Method: Composition-based stats.
 Identities = 232/590 (39%), Positives = 339/590 (57%), Gaps = 9/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG++ + DVG  V L+GWV   R  GGIIF+D+RD  GI QVV +        E 
Sbjct: 8   KRTKYCGEVSLEDVGKEVILTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELMEK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+RSE+ + I G+V  R  +T+N  I TG++E+ A+++ I S +E  P P+       
Sbjct: 68  ADSLRSEYCIGIRGIVEKRPPDTVNPKIKTGEVEVRAKELRIFSKSETPPFPIEEGINVN 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  + +N++ R ++   +R  +    FIE  TP+LT S+PEGARD+L
Sbjct: 128 EAVRLKYRYLDLRRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G F+ALPQ+PQ +KQLLM +GFD+YFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 188 VPSRIFPGKFFALPQSPQLFKQLLMVAGFDKYFQIVKCFRDEDLRADRQP-EFTQIDIEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD++   E +L+ +F E    + +     R+ Y +A+ R+GTDKPD R  + + N
Sbjct: 247 SFVDVDDVIEINERLLQTIFREMLGID-LKLPLPRLTYKEAMERFGTDKPDTRFGMELVN 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+   H EF+VF+   +                 +R   D + E+A++ G  GLA+I  
Sbjct: 306 LTDIVKHCEFKVFADAANKGGSVRAINAKGCAVKFSRREIDALVEYAKNFGAKGLAWIAV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D         P+ K L       I  RLD Q GD   F A           + R  IA
Sbjct: 366 ESD-----GLKSPIVKFLKEEEINEILKRLDAQVGDLLLFSADKDEVVFDVLGNVRLEIA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L +++ + F   W+ +FP +E++EEE +    H+PFT P          D   +++  
Sbjct: 421 RRLNLLDKSKFNLLWVTEFPLFEYSEEEGRYVAKHHPFTSPMDEDIEFLETDPARVRSKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H +E+  + F  +G ++E  ++RFG L  AF+ G PPHGGIA 
Sbjct: 481 YDIVLNGTEIGGGSIRIHSTELQKRMFKALGFTEERAQDRFGFLLEAFKYGTPPHGGIAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR+ MLLLG  ++R+   FP  ++    L  +PS V  +QLREL +++
Sbjct: 541 GFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590


>gi|218548573|ref|YP_002382364.1| aspartyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226736541|sp|B7LPH8|SYD_ESCF3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218356114|emb|CAQ88731.1| aspartyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|323968288|gb|EGB63695.1| aspartyl-tRNA synthetase [Escherichia coli M863]
 gi|323977949|gb|EGB73035.1| aspartyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324113602|gb|EGC07577.1| aspartyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 590

 Score =  634 bits (1634), Expect = e-179,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALSELSIQVVKKAE 588


>gi|317048524|ref|YP_004116172.1| aspartyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316950141|gb|ADU69616.1| aspartyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 593

 Score =  634 bits (1634), Expect = e-179,   Method: Composition-based stats.
 Identities = 225/595 (37%), Positives = 336/595 (56%), Gaps = 7/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F++A 
Sbjct: 2   RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQEAFQLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N+++ TG+IE+ A ++ I++ AE   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARDEKNKNSDMATGEIEIFAHELNIINRAEP--LPLDSNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDGEGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++R ++ +    +    NF ++ + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREVMERLIRELWLDIKGVD--LGNFPQMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF+VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DLLKNVEFQVFSGPANDAKGRVAALRVPGGATLSRKQIDEYGKFVEIYGAKGLAWMKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN     AI  R   QDGD  FF A             R  + ++
Sbjct: 357 LAKGFDGVQSPVAKFLNAEIVAAILERTGAQDGDVIFFGADRAKVVSDALGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I N   +   W++DFP +E  ++E  +   H+PFT P+    S    +     A  YD
Sbjct: 417 LQITNDKAWAPLWVIDFPMFE-ADDEGGLAAMHHPFTSPKEMTASELAANPEQAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H   +    FS +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGNMQQAVFSILGIAEDEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L +LG+++     K+
Sbjct: 536 DRVTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSEANPAALADLGIQLAPKKDKL 590


>gi|312134504|ref|YP_004001842.1| aspartyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774555|gb|ADQ04042.1| aspartyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 594

 Score =  634 bits (1634), Expect = e-179,   Method: Composition-based stats.
 Identities = 229/590 (38%), Positives = 338/590 (57%), Gaps = 9/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG++ + DVG  V L+GWV   R  GGIIF+D+RD  GI QVV +        + 
Sbjct: 8   KRTKYCGEVSLEDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+RSE+ + + G+V  R  ETIN  I TG++E+ A+++ I S +E  P P+       
Sbjct: 68  ADSLRSEYCIGVRGVVEKRPPETINPKIKTGEVEVRAKELRIFSKSETPPFPIEEGINVN 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  + +N++ R ++   +R  +    FIE  TP+LT S+PEGARD+L
Sbjct: 128 EAVRLKYRYLDLRRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G F+ALPQ+PQ +KQLLM +GFDRYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 188 VPSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD++   E +L+ +F E    + +     R+ Y +A+ R+G+DKPD R  + + N
Sbjct: 247 SFVDVDDVIEINEKLLQTIFGEMLGID-LKLPLPRLTYKEAMERFGSDKPDTRFGMELVN 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+   + EF+VF+   +                 +R   D + E+A++ G  GLA+I  
Sbjct: 306 LTDVAKNCEFKVFADAANKGGSVRAINAKGCAAIFSRREIDALVEYAKNFGAKGLAWIAV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D         P+ K L       I  RL  + GD   F A           + R  IA
Sbjct: 366 ESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKDEIVFDVLGNIRLEIA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +++ + F   W+ +FP +E++EEE +    H+PFT P          D   +++  
Sbjct: 421 RKLNLLDKSKFNLLWVTEFPLFEYSEEEGRYVAKHHPFTSPMDEDIEFLETDPAKVRSKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  E+  + F  +G ++E  ++RFG L  AF+ G PPHGGIA 
Sbjct: 481 YDIVLNGTEIGGGSIRIHSPEIQKRMFKALGFTEEKAQDRFGFLLEAFKFGTPPHGGIAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR+ MLLLG  ++R+   FP  ++    L  +PS V  +QLREL +++
Sbjct: 541 GFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590


>gi|228475157|ref|ZP_04059883.1| aspartate--tRNA ligase [Staphylococcus hominis SK119]
 gi|314936257|ref|ZP_07843604.1| aspartate--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|228270768|gb|EEK12170.1| aspartate--tRNA ligase [Staphylococcus hominis SK119]
 gi|313654876|gb|EFS18621.1| aspartate--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 588

 Score =  634 bits (1634), Expect = e-179,   Method: Composition-based stats.
 Identities = 230/592 (38%), Positives = 335/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG +    +G  V L GWVH  R  GG+IF+D+RD  GI Q+V NPD       I
Sbjct: 3   KRTTYCGLVTEELLGQKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSKEALSI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREY 120
           A++VRSE+V+ ++G V  R  ET+N  I TGQ+E+    I I++  A          +  
Sbjct: 63  AETVRSEYVVEVEGSVTKRDPETVNPKIKTGQVEVQVSHIHIINKSATPPFSINEENQSV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRPELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+DI+   E +L  V ++    +     F R+ YD+A++RYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDIIQMGEEMLSKVVKDVKGIDI-QTPFPRMTYDEAMKRYGSDKPDTRFGMELQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++     +F+VF   +  +   +            R   D + E+    G  GLA++ 
Sbjct: 301 DVSQLGKEMDFKVFKDTVEHDGEVKAIVAEGAADNYTRKDMDGLTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                  +    GP+A+     N   ++     + GD   F+A  P          R  I
Sbjct: 361 VV-----DEGLSGPIARFFEEENVNTLKELTGAKPGDLVMFVADKPNVVAQSLGALRIKI 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I+ +   F W+ D+P  E++E+ K+   AH+PFT P+    +   ++   ++A 
Sbjct: 416 AKELKLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKDEDIAKLDSEPEKVQAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR    E+  + F  +G +KE   ++FG L  AF+ G PPHGGIA
Sbjct: 476 AYDVVLNGYELGGGSIRISDGELQEKMFEVLGFTKEQARDQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +PS VS +QL EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPSEVSDKQLEELSLRIR 587


>gi|218699562|ref|YP_002407191.1| aspartyl-tRNA synthetase [Escherichia coli IAI39]
 gi|226736537|sp|B7NS52|SYD_ECO7I RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218369548|emb|CAR17317.1| aspartyl-tRNA synthetase [Escherichia coli IAI39]
          Length = 590

 Score =  634 bits (1634), Expect = e-179,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVASAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 588


>gi|320354862|ref|YP_004196201.1| aspartyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320123364|gb|ADW18910.1| aspartyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 594

 Score =  634 bits (1634), Expect = e-179,   Method: Composition-based stats.
 Identities = 233/594 (39%), Positives = 350/594 (58%), Gaps = 10/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+C +LG+  +     L GWV R R HGG+IF+D+RD +GITQVV NP+   A    A
Sbjct: 9   RTHTCNELGLDFLDQETTLMGWVLRRRDHGGVIFIDLRDRWGITQVVFNPEINPAVHAKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSEWV+ + G V  R     N  + TG IE+   ++ IL+ +E  P P+  + E  +
Sbjct: 69  HQLRSEWVIAVRGRVAKRPESMENPKLATGAIEILVDELRILNTSETPPFPLDEDVEVSD 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YR+LDLRR  + KN++ R + + ++R  +    F+E  TP+LT S+PEGARD+LV
Sbjct: 129 TLRLQYRYLDLRRPEIAKNLILRHQALQTVRTYLNDNQFLEIETPMLTRSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G F+ALPQ+PQ +KQ+LM +G DRY+QI  CFRDED R+DR P EF Q+DME+S
Sbjct: 189 PSRVHAGKFFALPQSPQLFKQILMVAGMDRYYQIVKCFRDEDLRADRQP-EFTQIDMELS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ +++I+  +E +++ +F+E  + +     F R+ YD+A+RR+GTD+PD R  + + ++
Sbjct: 248 FITEEEIITIVEGMIKALFKEIRDLDLQP-PFNRMTYDEAMRRFGTDRPDTRFGLELVDL 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE      F+VF+ ++      +       G   +R   D + E+A   G  G+A+I  +
Sbjct: 307 TETLRGCGFKVFNTVIDKGGMVKAINAKGCG-AFSRKDLDDLTEYAGRFGARGMAWIKVK 365

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            DE        P+ K       +A+   LD Q GD   F A          ++ R  +A+
Sbjct: 366 EDE-----WQSPITKFFTEDEIKAMAQALDAQPGDLILFGADTAKTVHQVLSELRLELAR 420

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            LG+I  + F F W+ DFP  E++EE+K+    H+PFT P      L   D  ++K+  Y
Sbjct: 421 RLGLIQGDSFNFLWVTDFPLLEYDEEQKRYTAVHHPFTAPNEAQLELLETDPGAVKSRAY 480

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG EI  G IR H   +  + F  +GI  E  + +FG L RA + G PPHGGIA G
Sbjct: 481 DLVLNGNEIGGGSIRIHSPLMQKKVFKALGIETEEAQEKFGFLLRALELGAPPHGGIAFG 540

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR++MLL G+ ++R+V  FP +Q     L  +PS+V+ +QL EL L+     K
Sbjct: 541 VDRLMMLLTGSTSIRDVIAFPKTQKATCPLTEAPSSVARKQLTELHLQPDWKEK 594


>gi|89895177|ref|YP_518664.1| aspartyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|89334625|dbj|BAE84220.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 592

 Score =  633 bits (1633), Expect = e-179,   Method: Composition-based stats.
 Identities = 237/593 (39%), Positives = 336/593 (56%), Gaps = 9/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT S G L +S  G+ + L GWV R R HGG+IF+D+RD  G  QVV NPD   F  A+ 
Sbjct: 7   RTES-GSLRLSHAGAVIHLLGWVQRRRDHGGVIFVDLRDRSGFVQVVFNPDMPDFAAAER 65

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+ I G V  R     N N+ TG+IE+ A+ + IL+ A+  P  +  + +  E +
Sbjct: 66  LRSEYVVAIKGKVRPRPEGATNPNLETGEIEVVAESLTILNGAKTPPFYIQDDVDVDEMV 125

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  + +    R ++   MR    ++ F E  TP+L  SSPEGARD+LVPS
Sbjct: 126 RLKYRYLDLRRPEMQQVFKIRHQVTQVMRNFFDSQGFYEIETPMLIKSSPEGARDYLVPS 185

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ G FYALPQ+PQ +KQLLM SG ++YFQI  CFRDED R+DR P EF QLD+EMSF 
Sbjct: 186 RVHPGEFYALPQSPQIFKQLLMVSGMEKYFQIVRCFRDEDLRADRQP-EFTQLDVEMSFA 244

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           E +DIL  ME ++  +F+E    +     F R+ Y +A+  YG+DKPD+R  + M +V E
Sbjct: 245 EVEDILPMMEELMARIFKETIGRDI-PRPFPRMTYQEAMELYGSDKPDIRFGMEMVDVAE 303

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
               S F+VF+  L+     +        G   R   D + ++    G  GLAYI     
Sbjct: 304 WVKDSNFKVFTDTLAKGGRVKALCAKGCAG-MPRRELDGLIQFVSIYGAKGLAYIVL--- 359

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
                    P+AK  +      +  +L  + GD  FF+A             R  + + L
Sbjct: 360 --AEEGIKSPIAKFFSEEQLNGLIAKLKGETGDILFFVADKEAVVADALGHLRLELGKRL 417

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G+I  +   F W+ +FP  +W+EE+K+    H+PFT P      L   +   ++A  YD+
Sbjct: 418 GLIPEDALNFLWVTEFPLLQWDEEDKRFVAIHHPFTSPMTEDLPLLPTEPGKVRAKAYDM 477

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG E+  G IR H  EV  Q F  +G++ E  + +FG L  AF+ G PPHGGIA G+D
Sbjct: 478 VLNGTELGGGSIRIHQREVQEQMFDLLGLTPEEAKAKFGYLLDAFEYGTPPHGGIAFGLD 537

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           R+ MLL G  N+R+V  FP +Q+  DL++ +PS+V  +QL+EL ++    P K
Sbjct: 538 RLTMLLTGKDNIRDVIAFPKTQSASDLMIQAPSSVDEKQLKELHIKRDILPGK 590


>gi|325274571|ref|ZP_08140629.1| aspartyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324100298|gb|EGB98086.1| aspartyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 590

 Score =  633 bits (1633), Expect = e-179,   Method: Composition-based stats.
 Identities = 232/593 (39%), Positives = 340/593 (57%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 2   RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRAETFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V  R    +NAN+ +G IE+   ++ +L+ AE  P P+    +  E 
Sbjct: 62  RVRSEYVVQLTGKVRKRPEGAVNANMASGAIEILGYQLTVLNEAETPPFPLNEYSDVGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  +   +  R+RI +S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 TRLRYRFIDLRRPEMADKLRLRSRITSSIRRFLDENGFLDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++++I+   E+++R +F+E  +       F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 241 LDENEIMGLTESMIRKLFKEVLDLEFGE--FPHMTFEEAMRRYGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF+   +             G    R+  D   ++    G  GLAYI    
Sbjct: 299 DQLKDVDFKVFAGPANDPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGAKGLAYIKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K++   N   I  R+   DGD  FF A             R  +  +
Sbjct: 359 RAKGVEGLQSPIVKNIPEANLNTILDRVGAVDGDIVFFGADKFKVVSEALGALRIRLGHD 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++ C  +   W++DFP +E NE+       H+PFT P+   + L+ N   +  +  YD
Sbjct: 419 FELLTCE-WAPMWVVDFPMFEENED-GSFTALHHPFTAPKCTPQELEAN-PATALSRAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI  E  E +FG L  A + G PPHGG+A G+
Sbjct: 476 MVLNGTELGGGSIRIHRKEMQQAVFRLLGIEAEEQEEKFGFLLDALKFGAPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+   ++  +P  V  + LREL +R+ E  K
Sbjct: 536 DRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGLVDAKALRELHIRLREQTK 588


>gi|187476630|ref|YP_784653.1| aspartyl-tRNA synthetase [Bordetella avium 197N]
 gi|97196548|sp|Q2L1K6|SYD_BORA1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|115421216|emb|CAJ47721.1| aspartyl-tRNA synthetase [Bordetella avium 197N]
          Length = 596

 Score =  633 bits (1633), Expect = e-179,   Method: Composition-based stats.
 Identities = 226/599 (37%), Positives = 337/599 (56%), Gaps = 10/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT   G +    +G  V L GWV+R R HGG+IF+D+RD  G+ Q+V +PD+A  F  A+
Sbjct: 2   RTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRTGLAQIVFDPDNAGAFGTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + GLV  R   T NA + +G++E+  + +EIL+ +   P  +  +    E+
Sbjct: 62  RLRNEFCVRVTGLVRERPQGTTNAELASGEVEVLCRDVEILNPSVTPPFQLDDDNLS-ET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + +N++ R R+   +R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPQMQRNLMLRYRVSIEVRKFLDQLGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 181 SRVNAGHFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I    E+++R VF+   N + + + F  + + +A+ R+G+DKPD+R  +   +V 
Sbjct: 240 LTETEIRAVFESMIRHVFKVVQNVD-LPDPFPIMTWTEAMARFGSDKPDMRVNLEFTDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF+   +      V      GG  +R+  D   ++    G  GLAYI    
Sbjct: 299 DIMRDVDFKVFASAATTQGSRVVALRVPGGGELSRSEIDAYTQFVGIYGAKGLAYIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+L+      +  R   QDGD  FF A             R  I   
Sbjct: 359 VAKGREGLQSPIVKNLHDAALAELVKRTGAQDGDIIFFGADRAKVVNDALGALRVKIGHS 418

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              ++ G+ +   +   W++DFP +E++EEE +   AH+PFT P+ G E     D     
Sbjct: 419 EFGKKTGLFS-GGWRPLWVVDFPMFEYDEEEGRYTAAHHPFTSPKDGHEDFLETDPSQAF 477

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R H  EV  + F  + I  +    +FG L  A Q G PPHGG
Sbjct: 478 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPDEAREKFGFLLDALQYGAPPHGG 537

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           IA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS+V  +QLREL +R+     K
Sbjct: 538 IAFGLDRIVTMMTGADSIRDVIAFPKTQRAQDLLTQAPSSVDDKQLRELHIRLRNTEVK 596


>gi|289550605|ref|YP_003471509.1| Aspartyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289180137|gb|ADC87382.1| Aspartyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 588

 Score =  633 bits (1633), Expect = e-179,   Method: Composition-based stats.
 Identities = 232/592 (39%), Positives = 336/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +    +G  + L GWVH  R  GG+IF+D+RD  GI Q+V NP        I
Sbjct: 3   KRTTYCGLVTEELLGEKITLKGWVHNRRDLGGLIFIDLRDREGIVQIVFNPAFSQEALNI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ + G V  R  ETIN  I TGQ+E+    IE+++ +E          +  
Sbjct: 63  AETVRSEYVVEVQGQVTKRDPETINPKIKTGQVEVQVSHIEVINKSETPPFSINEENQNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +I  S+R  +    F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRTELAQTFKMRHQITQSIRHYLDNNGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +LR V +E    + V   F R+ Y++A+ RYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVMAMGEEMLRKVVKEVKGID-VEGPFPRMTYNEAMSRYGSDKPDTRFDMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++     +F+VF   ++ N   +            R   D + E+    G  GLA++ 
Sbjct: 301 DVSKLGTEMDFKVFKDTVNQNGQVKAIVAKGAADNYTRKDMDGLTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                       GP+A+     N   +      + GD   F+A  P          R  +
Sbjct: 361 VV-----EEGLSGPIARFFEDANVATLTELTGAEPGDLVMFVADKPNVVAQSLGALRIKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+        ++  + +A 
Sbjct: 416 AKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEEDIKKLDSEPENAQAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H   +  + F  +G +KE  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHHGVLQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +PS VS +QL+EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPSDVSDKQLQELSLRIR 587


>gi|157371021|ref|YP_001479010.1| aspartyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166979993|sp|A8GFJ2|SYD_SERP5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157322785|gb|ABV41882.1| aspartyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 593

 Score =  633 bits (1633), Expect = e-179,   Method: Composition-based stats.
 Identities = 223/592 (37%), Positives = 332/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    F+ A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQKAAFDKAY 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  +EI++ +E   LP+   +   E 
Sbjct: 62  DLRNEFCIQIVGTVRARPDSQINKDMATGEVEVFAHALEIINRSEP--LPLDSNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME + R ++ +  N +    +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREVMEKLARELWLDVKNVD--LGDFPIMTFEEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDAKGRVAAICVPGGAQLTRKLIDEYGAFVNIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    EAI  R + Q GD  FF A             R  + ++
Sbjct: 357 RAAGMEGVQSPIAKFLSAEVLEAILARTNAQSGDILFFGADSFKIVTDAMGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   + +   W++DFP +E +  E  +   H+PFT P+            +  A  YD
Sbjct: 417 LELTKLDSWAPLWVVDFPMFEED-GEGGLAAMHHPFTAPRDMSPEELAGTPTNAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H SE+    FS +GI++     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRSEMQQTVFSILGINEHEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V+  
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLQELAICVVKKA 587


>gi|307265228|ref|ZP_07546787.1| aspartyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919850|gb|EFN50065.1| aspartyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 592

 Score =  633 bits (1633), Expect = e-179,   Method: Composition-based stats.
 Identities = 245/590 (41%), Positives = 351/590 (59%), Gaps = 10/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTH CG+L V DV   V + GWV R R HGG++F+D+RD  GI QVV + +  S  FE 
Sbjct: 9   KRTHMCGELTVEDVDKSVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFSNEVSSEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +SVRSE+VL I+G V+ R+ E +N  I TG+IE+ A  ++ILS +E  P P+       
Sbjct: 69  VQSVRSEYVLAIEGKVVKRAPENVNPKISTGEIEIYANTLKILSKSETPPFPIEDRSNVS 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR ++ +N++ R +I   +R  +    FIE  TP+L  S+PEGARD+L
Sbjct: 129 EAIRLKYRYLDLRRPSMQQNLMTRFKITKVVRDFLNRNGFIEIETPLLIKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EM
Sbjct: 189 VPSRIYPGKFYALPQSPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE +D+L   E ++  +F+E    + V   F R+ Y +++ R+GTDKPDLR  + + +
Sbjct: 248 SFVEVEDVLKINEKMIAEIFKETLGID-VPIPFKRLSYQESMERFGTDKPDLRFGMELKD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    SEF VF   L  +       +        R   D + E+A++ G  GL +I  
Sbjct: 307 LSDIVAQSEFNVFKNALKNSGSVRGINVK-GAASMPRRQLDELVEFAKTYGAKGLLWIQV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E        P  K L+    + I  RL+ + GD    +A          A  R  + 
Sbjct: 366 FEKE-----VKSPATKFLSEEEMKKILERLEAEAGDLLLIVADKDGIVFDTLAHLRLELG 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   +I+ N +EF WI+DFP  E++E EK+    H+PFT P+     L   + L ++A  
Sbjct: 421 KRFNLIDENKYEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEPLKVRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H +E+  + F  +G S+E    RFG L  AF+ G PPHGGIA 
Sbjct: 481 YDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFKYGAPPHGGIAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR+ M++ G+  +R+V  FP +QN   L+  +PS VS EQL+EL +++
Sbjct: 541 GLDRLAMIITGSDTIRDVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 590


>gi|74311804|ref|YP_310223.1| aspartyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|97196882|sp|Q3Z2M4|SYD_SHISS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|73855281|gb|AAZ87988.1| aspartate tRNA synthetase [Shigella sonnei Ss046]
          Length = 590

 Score =  633 bits (1633), Expect = e-179,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTVLAELSIQVVKKAE 588


>gi|170769354|ref|ZP_02903807.1| aspartyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170121678|gb|EDS90609.1| aspartyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 590

 Score =  633 bits (1633), Expect = e-179,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 332/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVMGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    +AI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIDAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+I+ + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLIDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELGIQVVKKAE 588


>gi|152979848|ref|YP_001354789.1| aspartyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|151279925|gb|ABR88335.1| Aspartyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 601

 Score =  633 bits (1633), Expect = e-179,   Method: Composition-based stats.
 Identities = 228/594 (38%), Positives = 339/594 (57%), Gaps = 10/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG    + +   V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 4   RTHYCGLTSEALLDQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRVDVFKAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +VR+E+ L I G+V SR   T N+N+ +G+IE+ A ++E+L+ +   P  +  +    E+
Sbjct: 64  AVRNEFCLRITGVVRSRPEGTSNSNLTSGKIEVLAHELEVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQNNLRLRYKVTMEVRKFLDAQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGHFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+   N + + N F  + Y  A+  YG+DKPD+R  +   ++T
Sbjct: 242 MNEQEIRDLFEGMIRLVFKNALNVD-LPNPFPVMDYATAMGLYGSDKPDMRVKLAFTDLT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
                 EF+VFS   ++  G  V      GG   R+  D   ++    G  GLAYI    
Sbjct: 301 SIMKDVEFKVFSGAANMEGGRVVGLRVPGGGAMPRSEIDAYTQFVAIYGAKGLAYIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+++      I      +DGD  FF A             R  +   
Sbjct: 361 KAKGRDGLQSPIVKNIHDEALAKIIEATGAEDGDLIFFGADKAKVVNDAIGALRVKVGHS 420

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              ++ G+ + + +   W++DFP +E++EE ++    H+PFT P+ G E L   D     
Sbjct: 421 DFGKKSGLFD-DEWRPLWVVDFPMFEFDEENQRWSATHHPFTAPKDGHEDLMETDPGKCI 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R H ++V  + F  + I  E  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWELGGGSVRIHRADVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +A G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+ 
Sbjct: 540 LAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSEVDEKQLRELHIRLR 593


>gi|152970927|ref|YP_001336036.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238895442|ref|YP_002920177.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|262041982|ref|ZP_06015164.1| aspartate-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330001138|ref|ZP_08303905.1| aspartate--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|166225351|sp|A6TB35|SYD_KLEP7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150955776|gb|ABR77806.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238547759|dbj|BAH64110.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259040680|gb|EEW41769.1| aspartate-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328537784|gb|EGF63983.1| aspartate--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 595

 Score =  633 bits (1632), Expect = e-179,   Method: Composition-based stats.
 Identities = 224/595 (37%), Positives = 325/595 (54%), Gaps = 7/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L  S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + INA++ TG IE+ A  + I++ +E   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRAREEKNINADMATGAIEVLASDLTIINRSES--LPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +     F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREIMEAMVRQLWLEVKGVDLGE--FPIMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKLIDEYGNFVKIYGAKGLAYIKVTE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L     EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGMDGINSPVAKFLTAEIVEAILDRTGAQDGDMIFFGADNKKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E ++ E  +   H+PFT P+               A  YD
Sbjct: 417 LSLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTADELKAAPEEAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++VE   K 
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALGELGIQVVEKEAKA 590


>gi|311031529|ref|ZP_07709619.1| aspartyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 590

 Score =  633 bits (1632), Expect = e-179,   Method: Composition-based stats.
 Identities = 235/594 (39%), Positives = 347/594 (58%), Gaps = 9/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT++CG++  S +G  + L GWV + R  GG+IFLD+RD  G+ Q+V NPD +    + A
Sbjct: 4   RTYNCGEVPQSSIGETIELKGWVQKRRDLGGLIFLDLRDRTGLVQIVFNPDVSAEALKTA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VR+E+VL I G V++R   T+N N+ TG IE+ A+ IE+L+ A+  P  +  + E  E
Sbjct: 64  ENVRNEYVLYIKGKVVARDEATVNPNLKTGAIEVQAEAIEVLNAAKTPPFVLDSKTEVNE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  +   +  R  +  S+R  +  + F+E  TPILT S+PEGARD+LV
Sbjct: 124 DIRLKYRYLDLRRPVMFDTLKMRHDVTRSIREFLNDQQFMEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHPGEFYALPQSPQIFKQLLMVSGVERYYQIARCFRDEDLRADRQP-EFTQVDIETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++I+  ME+++R V +  +    V   F RI Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLSQEEIIGMMEDMMRMVMKN-TKSVDVPETFPRITYQDAMNRYGSDKPDTRFEMELVDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VFS  ++     +   +       +R   D + E+    G  GLA++   
Sbjct: 302 SEQVADCGFKVFSAAVNNGGQVKAINVKGAASKYSRKDIDALTEFVAVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                     GP+AK  N    +     LD  +GD   F+A             R  + +
Sbjct: 362 A-----EGLKGPIAKFFNEEEQQGFIQSLDATEGDLILFVADKKSVVADALGALRMKLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+ + F F W+ D+P  E++EE  +   AH+PFTMP      L   +   ++A  Y
Sbjct: 417 ELGLIDESKFNFLWVTDWPLLEYDEEAGRYFAAHHPFTMPVREDLPLLETNPSEVRAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  ++  + F+ +G SKE    +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDIQEKMFAVLGFSKEEATEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR+VMLL G  N+R+   FP + +   +L  +PS V+  QL EL L +    +
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCILTEAPSPVAGGQLDELHLSLAVKKE 590


>gi|237749472|ref|ZP_04579952.1| aspartyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380834|gb|EEO30925.1| aspartyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 605

 Score =  633 bits (1632), Expect = e-179,   Method: Composition-based stats.
 Identities = 232/599 (38%), Positives = 344/599 (57%), Gaps = 14/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG      +G  V L GWVHR R HGGIIF+D+RD  G+ QVV +PD    F++A+
Sbjct: 4   RTNYCGLTTEKMLGQTVTLCGWVHRRRDHGGIIFIDLRDREGLVQVVCDPDRPDVFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+ L + G+V  R   T+N N+ +G+IE+  +K+E+L+ +   P  +  E    E+
Sbjct: 64  SVRNEFCLQVTGIVRERPQGTVNENLTSGRIEVFCEKLEVLNPSVTPPFQLDDE-HLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++    R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQNNLRLRYKVAMETRKYLDENGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D EMSF
Sbjct: 183 SRVNPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCEMSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ +I +  EN++RG+F++  + + + N F  + ++ A+ +YG+DKPDLR  +    +T
Sbjct: 242 VEEQEIRDLFENMIRGIFKKTMDVD-LPNPFPVMTHELAMAKYGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIP----AKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           +      F+VFS   ++  G  V  +     A+G G  R+  D   ++    G  GLAYI
Sbjct: 301 DVMKDVPFKVFSNAANMQGGRVVALLVPGGSAEGSGMPRSEIDSYTQFVGIYGAKGLAYI 360

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E G      P+ K+L   + + I  R   ++GD  FF A             RN 
Sbjct: 361 RVNDIEKGAAGLQSPIVKNLTEESIKQILERTGAKNGDLIFFGADKARVVNDAMGALRNK 420

Query: 420 IA-----QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           I         G+ +   +   W++DFP +E++E + +    H+PFT P+ G E    +D 
Sbjct: 421 IGYSDFGHANGLFDE-AWAPLWVIDFPMFEYSESDNRWAACHHPFTSPKDGHEDYLESDP 479

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               +  YD+V NG+E+  G IR H  EV  + F  + IS    + +FG L  A Q G P
Sbjct: 480 GRCLSKAYDMVLNGWELGGGSIRIHKEEVQSKVFRALKISDTEAQEKFGFLLDALQYGAP 539

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PHGG+A G+DR+V L+  + ++R+V  FP +Q    LL  +PS V  +QL+EL +R+ +
Sbjct: 540 PHGGLAFGLDRLVTLMTRSDSIRDVIAFPKTQRAQCLLTQAPSEVGEKQLQELHIRLRK 598


>gi|167035198|ref|YP_001670429.1| aspartyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|189082136|sp|B0KTJ6|SYD_PSEPG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166861686|gb|ABZ00094.1| aspartyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 591

 Score =  633 bits (1632), Expect = e-179,   Method: Composition-based stats.
 Identities = 234/593 (39%), Positives = 339/593 (57%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRAETFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R    +NAN+ +G IE+   ++ +L+ AE  P P+    +  E 
Sbjct: 63  RVRSEYVVQITGKVRKRPDGAVNANMASGAIEILGYQLNVLNEAETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  +   +  R+RI +S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMADKLRLRSRITSSIRRFLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ +I+   E+++R +F+E  +       F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LDESEIMGLTESMIRKLFKEVLDLEFGE--FPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF+   +             G    R+  D   ++    G  GLAYI    
Sbjct: 300 DQLKDVDFKVFAGPANDPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K++   N   I  R+   DGD  FF A             R  +  +
Sbjct: 360 RAKGVEGLQSPIVKNIPEANLNNILDRVGAVDGDIVFFGADKFKVVSEALGALRIRLGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++ C  +   W++DFP +E NE+       H+PFT P+   E L+ N   +  +  YD
Sbjct: 420 FELLTCE-WAPMWVVDFPMFEENED-GSFTALHHPFTAPKCTPEELEAN-PATALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI  E  E +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGIEAEEQEEKFGFLLDALKFGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+   ++  +P  V  + LREL +R+ E  K
Sbjct: 537 DRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGLVDAKALRELHIRLREQTK 589


>gi|227329757|ref|ZP_03833781.1| aspartyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 598

 Score =  633 bits (1632), Expect = e-179,   Method: Composition-based stats.
 Identities = 224/603 (37%), Positives = 337/603 (55%), Gaps = 7/603 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT+ CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F++A 
Sbjct: 2   RTNYCGQLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQLTGVVRARPESQINKDMATGEVEIFANALTIVNRSE--ALPLDSNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLRR  + + +  R RI + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKFRYLDLRRPEMAQRLKTRARITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++++    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLVRELWQDVKGVD--LGDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF+VFS   +   G         G   +R   D   ++    G  GLAYI    
Sbjct: 297 DLVKNIEFKVFSGPANDAKGRVAAIRVPGGAQLSRKQIDEYGKFIEIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L+     A+  R   QDGD  FF A             R  + ++
Sbjct: 357 RVRGLEGVQSPVAKFLSEDVLSAVLDRTAAQDGDILFFGADSAKVVTDALGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   N +E  W++DFP +E +  E  +   H+PFT P+  + S    + +S  A  YD
Sbjct: 417 LSLTKDNSWEPLWVVDFPMFEED-GEGGLAAMHHPFTAPRDMLPSELAANPVSAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    FS +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHSGEMQQTVFSILGITEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISV 603
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V   K       
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLEELAIAVVVKGKAAQDGKS 595

Query: 604 TTI 606
              
Sbjct: 596 ENE 598


>gi|262276116|ref|ZP_06053925.1| aspartyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262219924|gb|EEY71240.1| aspartyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 595

 Score =  633 bits (1632), Expect = e-179,   Method: Composition-based stats.
 Identities = 222/600 (37%), Positives = 330/600 (55%), Gaps = 7/600 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L  +  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD    FE+A 
Sbjct: 2   RTQYCGHLNKALAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDIFEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V  R    IN  + TG++E+ A+ +EI++ A    LP+   +   E 
Sbjct: 62  QLRNEFCIKVTGEVRLRPDSQINKGMATGEVEVLARGVEIINRAAP--LPLDFNQNNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKHRYLDLRRPEMSDRIKMRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R +++E  N +     F  + +++A+RR+G+DKPDLRNP+ M +V 
Sbjct: 239 MSAEQVREVTERMVREMWQELLNVD--LGAFPTMTFEEAMRRFGSDKPDLRNPLEMVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DLLKDVEFKVFSGPANDPKGRVAVIRVPGGAELSRKQIDEYTKFVGIYGAKGLAWVKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L      AI  R   + GD   F A             R  +  +
Sbjct: 357 RAAGMEGIQSPVAKFLTEDVVNAILERTGAESGDIILFGADKNNIVTEAMGALRLKLGTD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E + +E  +   H+PFT P          +  ++ +  YD
Sbjct: 417 LGLTDTSKWAPLWVVDFPMFEED-DEGNLHAMHHPFTSPLNVSPEELKANPQNVNSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI  E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNPEMQTAVFDLLGIDAEEQQVKFGFLLEALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISV 603
           DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL L I    KK  ++  
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSEANPAALEELALSITAAAKKNEEVDA 595


>gi|332971843|gb|EGK10789.1| aspartate--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 602

 Score =  633 bits (1632), Expect = e-179,   Method: Composition-based stats.
 Identities = 232/605 (38%), Positives = 346/605 (57%), Gaps = 12/605 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F++A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFKLAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IEIL+ A   P  +  +    E+
Sbjct: 62  SARNEFVLSITGRVRNRPEGTSNDKMISGKIEILAKEIEILNAAATPPF-MIDDENISET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + KN+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQKNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHAGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y DA+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVD--LGDFPRMAYWDAMFNYGSDKPDMRISLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR- 362
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTQFVGIYGAKGLAYIKVND 357

Query: 363 ---LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              L    N     P+ K L+    + I  R   ++GD  FF A             R  
Sbjct: 358 VTNLSNGENSGLQSPIVKFLSENALKEIIARTGAENGDIIFFGADKAKVVNEAIGALRIK 417

Query: 420 IAQELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           I +E G+ N    + ++  W++DFP +E++EE  +    H+PFT P+ G   L  +D   
Sbjct: 418 IGKEHGLENGYFVDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHVGLMTSDPEK 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G IR H +++  + F+ + IS E  + +FG L    + G PPH
Sbjct: 478 CLARAYDMVLNGWEIGGGSIRIHRADMQEKVFAALKISPEEQQEKFGFLLDNLKFGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+ +   
Sbjct: 538 GGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELHLRLRQKAT 597

Query: 597 KILKI 601
           +    
Sbjct: 598 EQKDA 602


>gi|121603698|ref|YP_981027.1| aspartyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120592667|gb|ABM36106.1| aspartyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 605

 Score =  633 bits (1632), Expect = e-179,   Method: Composition-based stats.
 Identities = 223/598 (37%), Positives = 339/598 (56%), Gaps = 11/598 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEI 61
           + R++ CG +  S +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD    F I
Sbjct: 10  QMRSNYCGLVTESLMGQTVSLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRAEMFGI 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+ + + G+V +R   T NA++ +GQ+E+   ++ +L+ +   P  +  +    
Sbjct: 70  AEDVRNEFCVQVKGIVRARPEGTANASLKSGQVEVLCHELIVLNASVTPPFQLDDDNLS- 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R  +R LDLRR  +  N++ R R+    R  + A  FI+  TP+LT S+PEGARD+L
Sbjct: 129 ETTRLTHRVLDLRRPYMQNNLMLRYRVAMETRKFLDANGFIDIETPMLTKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E 
Sbjct: 189 VPSRVNEGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIET 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  + ++  +F+   N +     F  + Y DA+ RYG+DKPDLR  +    
Sbjct: 248 SFMGEQEIRDMFQGMISNMFKTVLNTDLGE--FPVMAYADAMHRYGSDKPDLRVNLEFTE 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F+VFS   +   G  V      G   +R+  D   E+ +  G  GLA+I  
Sbjct: 306 LTDVMADVDFKVFSAPATTPGGRVVALRVPGGAEISRSEIDAYTEFVKIYGAKGLAWIKV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+ K+++      I  R   Q+GD  FF A             R  + 
Sbjct: 366 NDVSKGREGLQSPIVKNIHDAAVAEILKRTGAQNGDILFFGADKSKVVNDSIGALRLKVG 425

Query: 422 -----QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
                ++ G+     ++  W++DFP +E++E+ K+    H+PFT P+ G E     D   
Sbjct: 426 HSVFGKKSGLFTKG-WKPLWVVDFPMFEYDEDGKRWSAVHHPFTAPKDGHEDWMDTDPGR 484

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+E+  G +R H ++V  + FS + I  E  + +FG L  A Q G PPH
Sbjct: 485 CIAKAYDMVLNGWELGGGSVRIHRADVQSKVFSALNIGPEEAQLKFGFLLDALQYGAPPH 544

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           GG+A G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+   
Sbjct: 545 GGLAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTHAPSPVDEKQLRELHIRLRNP 602


>gi|269103021|ref|ZP_06155718.1| aspartyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268162919|gb|EEZ41415.1| aspartyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 592

 Score =  633 bits (1632), Expect = e-179,   Method: Composition-based stats.
 Identities = 214/597 (35%), Positives = 331/597 (55%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD    FE+A 
Sbjct: 2   RTQYCGQLNKSQAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKEVFELAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R    +N ++ TG++E+ A  +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRNEFCIRLTGEVRTRPESQVNKDMATGEVEVLASGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G+FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGNFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++  +++E  N +     F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSAEQVRAVTEQMITEMWKELLNVDLGE--FPIMPFSEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DIVKDVDFKVFSAPANDEKGRVAVICVPGGAELSRKQIDEYTKFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN      +  R + Q GD   F A             R  + ++
Sbjct: 357 RAAGLEGVQSPVAKFLNEEVIANLLERTNAQTGDIILFGADSNRVVTESMGALRLKLGED 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + ++  W++DFP +E NE+   +   H+PFT P          +     +  YD
Sbjct: 417 LGLTDKSAWKPLWVVDFPMFEENED-GSLSAMHHPFTSPLNISPEELKANPAGALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+ +    +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNGEMQAAVFDILGIAADEQRLKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    ++  +
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSVANPAALEELAIAVKLAKEESAE 592


>gi|206581095|ref|YP_002237743.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|238064670|sp|B5XQ00|SYD_KLEP3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|206570153|gb|ACI11929.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 595

 Score =  633 bits (1632), Expect = e-179,   Method: Composition-based stats.
 Identities = 224/595 (37%), Positives = 325/595 (54%), Gaps = 7/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L  S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + INA++ TG IE+ A  + I++ +E   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRAREEKNINADMATGAIEVLASDLTIINRSES--LPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKIRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNPI + +V 
Sbjct: 239 MTAPQVREIMEAMVRQLWLEIKGVD--LGDFPIMTFAEAERRYGSDKPDLRNPIELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKLIDEYGNFVKIYGAKGLAYIKVTE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L     EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGMDGINSPVAKFLTAEIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E ++ E  +   H+PFT P+               A  YD
Sbjct: 417 LSLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTADELKAAPEEAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRGDMQQTVFGILGINEHEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++VE   K 
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALGELGIQVVEKEAKA 590


>gi|16129819|ref|NP_416380.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89108706|ref|AP_002486.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|157161335|ref|YP_001458653.1| aspartyl-tRNA synthetase [Escherichia coli HS]
 gi|170081522|ref|YP_001730842.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|188492729|ref|ZP_02999999.1| aspartyl-tRNA synthetase [Escherichia coli 53638]
 gi|194439032|ref|ZP_03071115.1| aspartyl-tRNA synthetase [Escherichia coli 101-1]
 gi|238901081|ref|YP_002926877.1| aspartyl-tRNA synthetase [Escherichia coli BW2952]
 gi|253773177|ref|YP_003036008.1| aspartyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254161926|ref|YP_003045034.1| aspartyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256022468|ref|ZP_05436333.1| aspartyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|297521469|ref|ZP_06939855.1| aspartyl-tRNA synthetase [Escherichia coli OP50]
 gi|300824192|ref|ZP_07104310.1| aspartyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300928897|ref|ZP_07144402.1| aspartyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300951488|ref|ZP_07165323.1| aspartyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300956621|ref|ZP_07168900.1| aspartyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|301645618|ref|ZP_07245547.1| aspartyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|135102|sp|P21889|SYD_ECOLI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166979742|sp|A8A166|SYD_ECOHS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229559869|sp|B1XHD4|SYD_ECODH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|259511857|sp|C4ZQF0|SYD_ECOBW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|9256904|pdb|1EQR|A Chain A, Crystal Structure Of Free Aspartyl-Trna Synthetase From
           Escherichia Coli
 gi|9256905|pdb|1EQR|B Chain B, Crystal Structure Of Free Aspartyl-Trna Synthetase From
           Escherichia Coli
 gi|9256906|pdb|1EQR|C Chain C, Crystal Structure Of Free Aspartyl-Trna Synthetase From
           Escherichia Coli
 gi|15988142|pdb|1IL2|A Chain A, Crystal Structure Of The E. Coli Aspartyl-Trna
           Synthetase:yeast Trnaasp:aspartyl-Adenylate Complex
 gi|15988143|pdb|1IL2|B Chain B, Crystal Structure Of The E. Coli Aspartyl-Trna
           Synthetase:yeast Trnaasp:aspartyl-Adenylate Complex
 gi|41015|emb|CAA37856.1| aspartate-tRNA ligase [Escherichia coli K-12]
 gi|1736513|dbj|BAA15677.1| aspartyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|1788173|gb|AAC74936.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|157067015|gb|ABV06270.1| aspartyl-tRNA synthetase [Escherichia coli HS]
 gi|169889357|gb|ACB03064.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|188487928|gb|EDU63031.1| aspartyl-tRNA synthetase [Escherichia coli 53638]
 gi|194421991|gb|EDX37995.1| aspartyl-tRNA synthetase [Escherichia coli 101-1]
 gi|238860028|gb|ACR62026.1| aspartyl-tRNA synthetase [Escherichia coli BW2952]
 gi|242377587|emb|CAQ32342.1| aspartyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253324221|gb|ACT28823.1| aspartyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253973827|gb|ACT39498.1| aspartyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253978021|gb|ACT43691.1| aspartyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|260449011|gb|ACX39433.1| aspartyl-tRNA synthetase [Escherichia coli DH1]
 gi|300316603|gb|EFJ66387.1| aspartyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300449238|gb|EFK12858.1| aspartyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300463125|gb|EFK26618.1| aspartyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300523263|gb|EFK44332.1| aspartyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|301076150|gb|EFK90956.1| aspartyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|315136509|dbj|BAJ43668.1| aspartyl-tRNA synthetase [Escherichia coli DH1]
 gi|323937124|gb|EGB33404.1| aspartyl-tRNA synthetase [Escherichia coli E1520]
 gi|323940466|gb|EGB36657.1| aspartyl-tRNA synthetase [Escherichia coli E482]
 gi|323961921|gb|EGB57520.1| aspartyl-tRNA synthetase [Escherichia coli H489]
 gi|332343592|gb|AEE56926.1| aspartyl-tRNA synthetase AspS [Escherichia coli UMNK88]
          Length = 590

 Score =  632 bits (1631), Expect = e-179,   Method: Composition-based stats.
 Identities = 221/593 (37%), Positives = 329/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    E I  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEDILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 588


>gi|77163835|ref|YP_342360.1| aspartyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254435850|ref|ZP_05049357.1| aspartyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|97196746|sp|Q3JEB6|SYD_NITOC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|76882149|gb|ABA56830.1| aspartyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207088961|gb|EDZ66233.1| aspartyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 595

 Score =  632 bits (1631), Expect = e-179,   Method: Composition-based stats.
 Identities = 223/590 (37%), Positives = 336/590 (56%), Gaps = 5/590 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H CG+L  + +   V L GWV+R R HGG+IF+D+RD  G+ Q+V +P+     F  A
Sbjct: 2   RSHYCGELSEAHLDQSVTLCGWVNRRRDHGGVIFIDLRDREGLIQLVFDPEYSPESFRHA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +RSE+VL + G V  R   T N ++ TGQ+E+  Q++ +L+ +E  P PV  + E  E
Sbjct: 62  EQIRSEYVLQVKGRVQHRPEGTENPDLKTGQVEVLGQELILLNASETPPFPVDEKLEVGE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR +YR++DLRR    + +  R+ II  +R  +    F++  TPILT S+PEGARDFLV
Sbjct: 122 DIRLRYRYIDLRRPESLQRLRFRSAIIRQLRKFLDERGFLDIDTPILTQSTPEGARDFLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + G F+ALPQ+PQ +KQLLM +G DRY+Q+  CFRDED R+DR P EF QLD+E S
Sbjct: 182 PSRTHPGQFFALPQSPQLFKQLLMVAGVDRYYQVVRCFRDEDLRADRQP-EFTQLDIEAS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ ++ ++  ME + + +F        +   F+R+ Y +A+  +G DKPDLR P+ +  V
Sbjct: 241 FLHEETLMALMEEMFKELFATVLEV-PLHTPFVRMPYAEALACFGLDKPDLRIPLRLVEV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     +F+VF++      G         GG  +R   +   ++    G  GLAYI   
Sbjct: 300 GDLMKTVDFKVFAQPAQDRDGRVAALRLPGGGKLSRKEIEEYTQFVAIYGAKGLAYIKVV 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K L      A+  R + ++GD  FF A             R  +  
Sbjct: 360 ERSRGREGLQSPILKFLPDEVIGAMLERTEAENGDIVFFGADKASIVNESLGALRVKLGH 419

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           + G++  + +   W++DFP +EW+E++ +    H+PFT P+    SL   +  + ++  Y
Sbjct: 420 DHGLV-EHGWSPLWVIDFPMFEWDEDDHRWHALHHPFTSPKEEDLSLLEQNPGACRSRAY 478

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+  G IR   S+V  Q F  +GI  E  +++FG L  A + G PPHGGIA G
Sbjct: 479 DLVLNGTEVGGGSIRISQSQVQSQVFRLLGIGDEEAQDKFGFLLDALKYGCPPHGGIAFG 538

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR+VML+ G+ ++REV  FP +Q     L G+P  V+  QLRELG+ + 
Sbjct: 539 LDRLVMLMTGSASIREVIPFPKTQTAACPLTGAPGQVAEAQLRELGIGVR 588


>gi|82776452|ref|YP_402801.1| aspartyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|97196873|sp|Q32H95|SYD_SHIDS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|81240600|gb|ABB61310.1| aspartate tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 590

 Score =  632 bits (1631), Expect = e-179,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDLKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 588


>gi|261821375|ref|YP_003259481.1| aspartyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261605388|gb|ACX87874.1| aspartyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 598

 Score =  632 bits (1631), Expect = e-179,   Method: Composition-based stats.
 Identities = 222/603 (36%), Positives = 334/603 (55%), Gaps = 7/603 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT+ CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F++A 
Sbjct: 2   RTNYCGQLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQLTGVVRARPESQINKDMATGEVEIFANALTIVNRSE--ALPLDSNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLRR  + + +  R RI + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKFRYLDLRRPEMAQRLKTRARITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLVRELWLDVKGVD--LGDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G   +R   D   ++    G  GLAYI    
Sbjct: 297 DLLKDIEFKVFSGPANDVKGRVAAIRVPGGAQLSRKQIDEYGKFIEIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L+     A+  R   QDGD  FF A             R  + ++
Sbjct: 357 RAKGLEGVQSPVAKFLSEDVLSALLDRTAAQDGDILFFGADSAKVVTDALGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   N +E  W++DFP +E +  E  +   H+PFT P+  + S    + ++  A  YD
Sbjct: 417 LSLTKDNSWEPLWVVDFPMFEED-GEGGLAAMHHPFTAPRDMLPSELSANPVAAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRGEMQQTVFGILGITEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISV 603
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V   K       
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLEELAIAVVVKGKAAQDGKS 595

Query: 604 TTI 606
              
Sbjct: 596 ENE 598


>gi|296445173|ref|ZP_06887133.1| aspartyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296257347|gb|EFH04414.1| aspartyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 592

 Score =  632 bits (1631), Expect = e-179,   Method: Composition-based stats.
 Identities = 326/596 (54%), Positives = 423/596 (70%), Gaps = 5/596 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  +D G  +RLSGW HR+R HGG++F+D+RDHYG+TQ V +PDS  F+
Sbjct: 1   MHRYRSHNCGELREADAGQKIRLSGWCHRIRDHGGVLFVDLRDHYGLTQCVVDPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSEWV  +DG V  R A T N ++ TG +E+   +IE+L  A ELPLPVFG+  Y
Sbjct: 61  DAEKLRSEWVARLDGEVRKRPAGTENPDMPTGLVEVYVTEIEVLGPAAELPLPVFGDLPY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YRFLDLRR+ LH NI+ R  +I+S+R RM    F E  TPILTASSPEGARDF
Sbjct: 121 PEETRLRYRFLDLRREKLHANIMLRGAVIDSLRRRMKERGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRMHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+   +E VLRGVFEEF  G  V+  F +I + DA+ +YG+DKPDLRNP+I+ 
Sbjct: 241 MSFVTQEDVFAAVEPVLRGVFEEFGEGKPVTQVFPKIAFRDAMLKYGSDKPDLRNPLIIA 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+  F   +        +                  R+F D++N+WARS+G PGL YI 
Sbjct: 301 DVSAEFARDDVSF----KAFKGKVVRAIPAPGAAAQPRSFFDKLNDWARSEGAPGLGYII 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +  +E+G + G GP+AK +      A+  +  ++ GD+ FF AG+ LK    A  AR  I
Sbjct: 357 F-DEENGALVGKGPIAKFIPPEALAALAAKGGVKAGDALFFSAGEELKAAKLAGAARLRI 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             ELG+   + FEFCWI+DFP YEWNE++KKIDF+HNPF+MPQGG+E+L+  + L + AF
Sbjct: 416 GSELGLCKTDVFEFCWIVDFPMYEWNEDDKKIDFSHNPFSMPQGGLEALETRNSLDLLAF 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  +VM +AF   G  +EV+  +FGG+YRAFQ G PPHGGIA
Sbjct: 476 QYDIVCNGIELSSGAIRNHRPDVMKKAFEIAGYGEEVLLEKFGGMYRAFQYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DRIVMLL G +N+REV LFPM+Q   DLLMG+PS  + +QLREL +R+    K
Sbjct: 536 PGVDRIVMLLAGEENLREVVLFPMNQRAEDLLMGAPSEATPKQLRELHIRLNLPEK 591


>gi|237731903|ref|ZP_04562384.1| aspartyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226907442|gb|EEH93360.1| aspartyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 590

 Score =  632 bits (1631), Expect = e-179,   Method: Composition-based stats.
 Identities = 221/593 (37%), Positives = 329/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S  G  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHEGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ ++   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASDLTIINRSDS--LPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRNLWLEVKGVD--LGDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLVKDVEFAVFSGPANDAKGRVAALRVPGGAALSRKQIDDYGNFIKIYGAKGLAYIKVTE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGITSPVAKFLNAEIVEAILARTGAQDGDMIFFGADNKKVVADAMGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I +   +   W++DFP +E ++ E  +   H+PFT P+    +          A  YD
Sbjct: 417 LNITDEAKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPKDMTAAELKAAPEDAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANAAALAELSIQVVKKAE 588


>gi|300935841|ref|ZP_07150799.1| aspartyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300458953|gb|EFK22446.1| aspartyl-tRNA synthetase [Escherichia coli MS 21-1]
          Length = 590

 Score =  632 bits (1631), Expect = e-179,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGLQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 588


>gi|222528610|ref|YP_002572492.1| aspartyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455457|gb|ACM59719.1| aspartyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 594

 Score =  632 bits (1631), Expect = e-179,   Method: Composition-based stats.
 Identities = 226/590 (38%), Positives = 336/590 (56%), Gaps = 9/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  C ++ + DVG  V L+GWV   R  GGIIF+D+RD  GI QVV +        + 
Sbjct: 8   KRTKYCAEVSLEDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+RSE+ + + G+V  R  ET+N  I TG+IE+ A ++ I + +E  P P+       
Sbjct: 68  ADSLRSEYCIGVRGIVEKRPPETVNPKIKTGEIEVRATELRIFNKSETPPFPIEEGINVN 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  + +N++ R ++   +R  +    FIE  TP+LT S+PEGARD+L
Sbjct: 128 EAVRLKYRYLDLRRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G F+ALPQ+PQ +KQLLM +GFDRYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 188 VPSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD++   E +L+ +F E    + +     R+ Y +A+ R+G+DKPD R  + + +
Sbjct: 247 SFVDVDDVIEINEKLLKAIFGEMLGID-LKLPLPRLTYKEAMERFGSDKPDTRFGMELVD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+   + EF+VFS   +                 +R   D + E+A++    GLA+I  
Sbjct: 306 ITDIVKNCEFKVFSDAANKGGSVRAINAKGCAATFSRREIDALVEFAKNFKAKGLAWIAV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D         P+ K L       I  RL  + GD   F A           + R  IA
Sbjct: 366 ESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKDEIVFDVLGNLRLEIA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +++ + F   W+++FP +E++EEE +    H+PFT P          D   +++  
Sbjct: 421 RKLNLLDKSKFNLLWVVEFPLFEYSEEEGRFVAKHHPFTSPMDEDLEFLEIDPAKVRSKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  E+  + F  +G ++E  ++RFG L  AF+ G PPHGGIA 
Sbjct: 481 YDIVLNGTEIGGGSIRIHSPEIQKRMFKALGFTEERAQDRFGFLLEAFKYGTPPHGGIAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR+ MLLLG  ++R+   FP  ++    L  +PS V  +QLREL +++
Sbjct: 541 GFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590


>gi|228923154|ref|ZP_04086445.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228836533|gb|EEM81883.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 593

 Score =  632 bits (1631), Expect = e-179,   Method: Composition-based stats.
 Identities = 229/581 (39%), Positives = 337/581 (58%), Gaps = 9/581 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTHSCG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHSCGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQAIKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL+ ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILDMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVESGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK  +  +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFSEEDANVLMSTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  Q
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQ 577


>gi|75906472|ref|YP_320768.1| aspartyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|97196512|sp|Q3MGL3|SYD_ANAVT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|75700197|gb|ABA19873.1| aspartyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 614

 Score =  632 bits (1631), Expect = e-179,   Method: Composition-based stats.
 Identities = 247/601 (41%), Positives = 352/601 (58%), Gaps = 17/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L   D+G  V L GWV R R HGG+IFLD+RD  GI QVV++P      +E+A
Sbjct: 21  RTHYCGELRQKDIGETVTLYGWVDRRRDHGGVIFLDLRDRSGIVQVVSDPQRTPDSYELA 80

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
            S+R+E+V+ I G V  R  E++N+ I TG++E+ A KIE+L+         +       
Sbjct: 81  NSLRNEYVVEITGRVTQRPEESLNSRIPTGEVEIYADKIELLNGVRKQLPFQVSTADTET 140

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRRD + +NI  R +++ +MR  +   E FIE  TPILT S+PEGAR
Sbjct: 141 VREDLRLKYRYLDLRRDRMARNIQLRHQVVKAMRRYLEDVEGFIEVETPILTRSTPEGAR 200

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+++PSRVN G ++ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 201 DYVLPSRVNPGEWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 259

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +++I+   E ++  +F+       +   F R+ Y +A+ RYG DKPD R  + 
Sbjct: 260 MEMSFMSEEEIIQLNEKLVSYIFKTVKGVE-LPLPFPRLTYAEAMERYGCDKPDTRYDLQ 318

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + NV++    S F+VF   ++     ++  IP      +         +   A   G  G
Sbjct: 319 LVNVSDVMKDSGFKVFRDAVANGGIVKILPIPNGNEQISNVRIKPGGDLFREASEAGAKG 378

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI  R+ E G +  +G +  +L+    + I  R   + G    F AGD          
Sbjct: 379 LAYI--RVREDGEIDTIGAIKDNLSEEQKQEILQRTGAKPGHLLLFGAGDAATVNKTLDR 436

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  IA+E G+I+ +     W++DFP +EWN +EK+++  H+PFT P          DL 
Sbjct: 437 LRQAIAKEFGLIDPDKINLLWVVDFPMFEWNADEKRLEALHHPFTAPHPDDLH----DLK 492

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NGFE+  G  R +  EV  Q F  +G+S E  +N+FG L  AF+ G PP
Sbjct: 493 TARAQAYDLVFNGFEVGGGSRRIYQREVQEQVFETIGLSPEEAQNKFGFLLEAFEYGTPP 552

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VML  G +++R+V  FP +Q    LL  +PS V V+QL+EL +     P
Sbjct: 553 HGGIAYGLDRLVMLFAGEESIRDVIAFPKTQQARCLLTDAPSGVDVKQLKELHVASTYKP 612

Query: 596 K 596
           K
Sbjct: 613 K 613


>gi|224476727|ref|YP_002634333.1| aspartyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254781751|sp|B9DNF8|SYD_STACT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|222421334|emb|CAL28148.1| aspartyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 588

 Score =  632 bits (1631), Expect = e-179,   Method: Composition-based stats.
 Identities = 236/592 (39%), Positives = 344/592 (58%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG +    +G  V L GWVH  R  GG+IF+D+RD  G  Q+V NPD      EI
Sbjct: 3   KRTTYCGLVTEDLLGQRVTLKGWVHNRRDLGGLIFVDLRDREGYVQIVFNPDFSKEALEI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REY 120
           A+S+RSE+V+ ++G V  R  ET+N  I TG +E+    I I++ A+  P  +  E ++ 
Sbjct: 63  AESIRSEYVIEVEGTVTKRDPETVNPKIKTGNVEVQVDHINIINKAQTPPFSINDENQQV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L + I  R +I  S+R  +  + F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRQELAQTIKMRHQITRSVREFLDRDGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHEGQFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDVE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +L+ V ++    + ++  F R+ Y +A+ RYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVMEMGEALLKKVVKDVKGID-LTEQFPRMTYAEAMSRYGSDKPDTRFEMELK 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E     +F+VF   +      +  A         R   D + E+    G  GLA++ 
Sbjct: 301 DVSELGRTMDFKVFKDTVEKGGEVKALAAKGAADKYTRKDMDALTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+A+     + E ++     + GD   F+A  P          R  +
Sbjct: 361 VVED-----GFSGPIARFFEDKDVEKVKELTGAETGDLVMFVADKPSVVAQSLGALRVKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ELG+I+ N   F W+ D+P  E++E+EK+   AH+PFT P+        +     +A 
Sbjct: 416 AHELGLIDNNKLNFLWVTDWPLLEYDEDEKRYVAAHHPFTSPKDEDLDKLDSAPEKAQAK 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H +++  + F  +G +KE  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHNADIQSKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR VMLL G  N+R+   FP + +   L+  +PS VS +QL EL LRI 
Sbjct: 536 LGLDRFVMLLAGRNNLRDTIAFPKTASAVSLMTQAPSEVSDKQLEELSLRIR 587


>gi|242239588|ref|YP_002987769.1| aspartyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242131645|gb|ACS85947.1| aspartyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 601

 Score =  632 bits (1631), Expect = e-179,   Method: Composition-based stats.
 Identities = 226/599 (37%), Positives = 334/599 (55%), Gaps = 7/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F +A 
Sbjct: 2   RTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFTLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R    IN ++ TG++E+ A  + I++ AE   LP+   +   E 
Sbjct: 62  ELRNEFCIQLTGTVRARPDSQINKDMATGEVEVFASALSIINRAEP--LPLDSNQNNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R RI + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRARITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E +  +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLVRELWLEINGVD--LGDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         GG  +R   D   ++    G  GLAYI    
Sbjct: 297 DLLNDVDFKVFSGPANDPKGRVAAIRVPGGGQLSRKQIDEYAKFIEIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L+     A+  R   QDGD  FF A             R  + ++
Sbjct: 357 KAKGLEGVQSPVAKFLSEAVLAALLDRTAAQDGDILFFGADSAKVVTDALGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I N N ++  W++DFP +E ++ E  +   H+PFT P+    S    +  +  A  YD
Sbjct: 417 LKITNENSWQPLWVIDFPMFE-DDGEGGLAAMHHPFTAPRDMAPSELAANPTAAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI +     +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHHGEMQQTVFRILGIDEHQQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V   K     +
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALEELSIAVVGKGKAAQDAA 594


>gi|170024382|ref|YP_001720887.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|238688453|sp|B1JLL5|SYD_YERPY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169750916|gb|ACA68434.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 598

 Score =  632 bits (1631), Expect = e-179,   Method: Composition-based stats.
 Identities = 220/592 (37%), Positives = 329/592 (55%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    FE A 
Sbjct: 2   RTEYCGQLNLSHVGQSVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAFEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSEP--LPLDSNQINSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKSRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MSADQVREVMEKLVRELWQETKGVD--LGDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
                 EF+VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 SLVKDVEFKVFSGPANDAKGRVAALRVPGGAQLSRKQIDEYGQFVGIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    +AI V    + GD  FF A             R  + ++
Sbjct: 357 RAAGLEGVQSPIAKFLSSEVLDAILVATQAESGDILFFGADSYKIVTDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     +   W++DFP +E ++ E  +   H+PFT P+            +  A  YD
Sbjct: 417 LELTRLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKDMSPEQLAAAPTTAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRTEMQQTVFGILGITEDEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V   
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVVAKK 587


>gi|17229928|ref|NP_486476.1| aspartyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|24212410|sp|Q8YUB6|SYD_ANASP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|17131528|dbj|BAB74135.1| aspartate--tRNA ligase [Nostoc sp. PCC 7120]
          Length = 595

 Score =  632 bits (1631), Expect = e-179,   Method: Composition-based stats.
 Identities = 247/601 (41%), Positives = 352/601 (58%), Gaps = 17/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L   D+G  V L GWV R R HGG+IFLD+RD  GI QVV++P      +E+A
Sbjct: 2   RTHYCGELRQKDIGETVTLYGWVDRRRDHGGVIFLDLRDRSGIVQVVSDPQRTPDSYELA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
            S+R+E+V+ I G V  R  E++N  I TG++E+ A KIE+L+         +       
Sbjct: 62  NSLRNEYVVEITGRVTQRPEESLNTRIPTGEVEIYADKIELLNGVRKQLPFQVSTADTET 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRRD + +NI  R +++ +MR  +   E FIE  TPILT S+PEGAR
Sbjct: 122 VREDLRLKYRYLDLRRDRMARNIQLRHQVVKAMRRYLEDVEGFIEVETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+++PSRVN G ++ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYVLPSRVNPGEWFALPQSPQLFKQILMVSGLDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +++I+   E ++  +F+       +   F R+ Y +A+ RYG DKPD R  + 
Sbjct: 241 MEMSFMSEEEIIELNEKLVSYIFKTVKGVE-LPLPFPRLTYAEAMERYGCDKPDTRYDLQ 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + NV++    S F+VF   ++     ++  IP      +         +   A   G  G
Sbjct: 300 LVNVSDVMKDSGFKVFRDAVANGGIVKILPIPNGNEQISNVRIKPGGDLFREASEAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI  R+ E G +  +G +  +L+    + I  R   + G    F AGD +        
Sbjct: 360 LAYI--RVREDGEIDTIGAIKDNLSEEQKQEILQRTGAKPGHLLLFGAGDAVTVNKTLDR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  IA+E G+I+ +     W++DFP +EWN +EK+++  H+PFT P          DL 
Sbjct: 418 LRQAIAKEFGLIDPDKINLLWVVDFPMFEWNADEKRLEALHHPFTAPHPDDLH----DLK 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NGFE+  G  R +  EV  Q F  +G+S E  +N+FG L  AF+ G PP
Sbjct: 474 TARAQAYDLVFNGFEVGGGSRRIYQREVQEQVFETIGLSPEEAQNKFGFLLEAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VML  G +++R+V  FP +Q    LL  +PS V V+QL+EL +     P
Sbjct: 534 HGGIAYGLDRLVMLFAGEESIRDVIAFPKTQQARCLLTDAPSGVDVKQLKELHVASTYKP 593

Query: 596 K 596
           K
Sbjct: 594 K 594


>gi|229019624|ref|ZP_04176436.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229025864|ref|ZP_04182260.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735416|gb|EEL86015.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228741672|gb|EEL91860.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 591

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 229/581 (39%), Positives = 337/581 (58%), Gaps = 9/581 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQATKVNVLNAAKTTPIIISDDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL  ME ++  V ++      VS  F R+ Y DA+ RYG+DKPD R  + + ++
Sbjct: 243 FLTQDEILEMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARYGSDKPDTRFEMELTDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E      F+VF+  +      +           +R   D + E+ +  G  GLA++   
Sbjct: 302 SEFAAGCGFKVFTSAVENGGQVKAINAKGAASKYSRKDIDALTEFVKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     + +A+   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDAKALMNTLEATAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  Q
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQ 577


>gi|283782453|ref|YP_003373208.1| aspartyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283440906|gb|ADB19348.1| aspartyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 591

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 235/594 (39%), Positives = 343/594 (57%), Gaps = 8/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           RTH+CG+L  + VG  V L GWV + R HGG +F+D+RD YG TQVV  PD+    +  A
Sbjct: 3   RTHTCGELRSTHVGEVVSLCGWVDKSRDHGGTLFIDLRDRYGKTQVVFEPDAGAELYAEA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R E V+ + G V+ R   T NA + TG +EL    +E+L+     P     +    E
Sbjct: 63  SKLRGEDVIKVTGKVIVRPEGTRNAKLSTGDVELQVTALELLNKCNNAPFSPSQQDLPGE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + K +V R+ II +MR       FI+  TPIL  S+PEGARD+LV
Sbjct: 123 DLRLKYRYLDLRRSEMQKTLVLRSSIIKAMRDYFEENQFIDVETPILGRSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFYALPQ+PQ YKQ+LM +G+DRY Q+A CFRDED R+DR P EF QLD+EMS
Sbjct: 183 PSRVHNGSFYALPQSPQLYKQILMVAGYDRYVQVARCFRDEDLRADRQP-EFTQLDLEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV  +D+++ ++ +++ + ++F N + +     R+ +D+A+ R+G D PDLR    + + 
Sbjct: 242 FVTHEDVMSMIDGLMKKLAKQFLNID-LQLPLPRMTWDEAMERFGHDAPDLRYGCELIDC 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+     +FRVF +             P  G   +R   D + E+ +     GLA+  +R
Sbjct: 301 TDLAAKCDFRVFKETAEQGKKLRGICAPGGGKLYSRKLIDELTEFVKQFEAKGLAW--FR 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           +++ G +    P+AK+      E  + R+  + GD  FF+A      C    + R  I  
Sbjct: 359 VEDDGKL--FSPIAKNFTEAQLEEFKTRMQAKPGDIMFFVADTWAVSCKALHNLRKKIGV 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L + +     F W+++FP +E++ EEK+    H+PFT P+     +  +D    +A  Y
Sbjct: 417 DLKLYDPKTMNFSWVVEFPMFEYDAEEKRWVSMHHPFTAPRPQDLHMLDSDPAKSRAVAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E   G IR H  +V  + F  +GI +E  +NRFG L  A Q G PPHGGIA G
Sbjct: 477 DLVINGSEAGGGTIRIHDWQVQQKVFGLLGIDEETAKNRFGFLLEALQFGAPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IDR+VML     ++REV  FP +Q   DL+  +P+ V  +QLRELG+++    K
Sbjct: 537 IDRVVMLFGALDSIREVIAFPKTQKAADLMTEAPNLVDNKQLRELGIKLASADK 590


>gi|309702090|emb|CBJ01404.1| aspartyl-tRNA synthetase [Escherichia coli ETEC H10407]
          Length = 590

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 221/593 (37%), Positives = 329/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSRVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    E I  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEDILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 588


>gi|288934601|ref|YP_003438660.1| aspartyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|290508802|ref|ZP_06548173.1| aspartyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|288889310|gb|ADC57628.1| aspartyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|289778196|gb|EFD86193.1| aspartyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 595

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 223/595 (37%), Positives = 327/595 (54%), Gaps = 7/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L  S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + INA++ TG IE+ A  + I++ +E   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRAREEKNINADMATGAIEVLASDLTIINRSES--LPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREIMEAMVRQLWLEIKGVD--LGDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKLIDEYGNFVKIYGAKGLAYIKVTE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L     EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGMDGINSPVAKFLTAEIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E ++ E  +   H+PFT P+    +          A  YD
Sbjct: 417 LSLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTANELKAAPEEAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++VE   K 
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALGELGIQVVEKEAKA 590


>gi|300924955|ref|ZP_07140882.1| aspartyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|301327655|ref|ZP_07220863.1| aspartyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|300418891|gb|EFK02202.1| aspartyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300845803|gb|EFK73563.1| aspartyl-tRNA synthetase [Escherichia coli MS 78-1]
          Length = 590

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKRIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 588


>gi|242242902|ref|ZP_04797347.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233617|gb|EES35929.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 588

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 237/595 (39%), Positives = 343/595 (57%), Gaps = 11/595 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M++ RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD     
Sbjct: 1   MNK-RTTYCGLVTEEFLNEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGE 117
            ++A++VRSE+V+ + G+V  R AETIN  I TGQ+E+    IEI++ +E          
Sbjct: 60  LQVAETVRSEYVVEVQGVVTKRDAETINPKIKTGQVEVQVSNIEIINKSETPPFSINEEN 119

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGA
Sbjct: 120 VNVDENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGA 179

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+
Sbjct: 180 RDYLVPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQV 238

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV+Q+DI+   E++LR V ++    + VS  F R+ Y +A+ RYG+DKPD R  +
Sbjct: 239 DIEMSFVDQEDIIAMGEDMLRKVVKDVKGID-VSGPFPRMTYAEAMDRYGSDKPDTRFGM 297

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + NV++      F+VF   +  N   +            R   D + E+    G  GLA
Sbjct: 298 ELINVSQLGKEMNFKVFKDTVDNNGEIKAIVAKDAADKYTRKDMDALTEFVNIYGAKGLA 357

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++    D        GP+A+     N E ++   + + GD   F+A  P          R
Sbjct: 358 WVKVVDD-----GLSGPIARFFEDANVETLKQLTEAKPGDLVMFVADKPNVVAQSLGALR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ELG+I+ +   F W+ D+P  E++E+ K+   AH+PFT P+         +  ++
Sbjct: 413 IKLAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEPENV 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G IR H  E+  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 473 QANAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFTNEQAQEQFGFLLDAFKYGAPPHG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIA G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL+EL LRI 
Sbjct: 533 GIALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLQELSLRIR 587


>gi|70726292|ref|YP_253206.1| aspartyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|97196912|sp|Q4L6X5|SYD_STAHJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|68447016|dbj|BAE04600.1| aspartyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 588

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 232/592 (39%), Positives = 338/592 (57%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD       +
Sbjct: 3   KRTTYCGLVTEELLNQKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALSV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ ++G V  R  +T+N+ I TGQ+E+    I I++ +E          +  
Sbjct: 63  AETVRSEYVVEVEGTVTKRDPDTVNSKIKTGQVEVQVSNISIINKSETPPFSINEENQNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +   ++R  +    F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRPELAQTFKMRHQTTRAIREYLDNNGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +LR V ++    + VS  F R+ Y++A+RRYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVIQMGEEMLRKVVKDVKGID-VSGPFPRMTYEEAMRRYGSDKPDTRFEMELK 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++     +F+VF   +  N   +            R   D + E+    G  GLA++ 
Sbjct: 301 DVSQLGREMDFKVFKDTVENNGEVKAIVAKGAADNYTRKDMDALTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+A+     N   ++     + GD   F+A  P          R  I
Sbjct: 361 VVDD-----GLSGPIARFFEDSNVATLKDLTQAESGDLVMFVADKPNVVAQSLGALRIKI 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+ N   F W+ D+P  E++E+ K+   AH+PFT P+    S   ++  + +A 
Sbjct: 416 AKELGLIDENKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKQEDISKLDSEPQNAQAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR    E+  + F  +G +KE    +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIADGELQEKMFEVLGFTKEQAREQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLEELSLRIR 587


>gi|22126144|ref|NP_669567.1| aspartyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|51596362|ref|YP_070553.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108807431|ref|YP_651347.1| aspartyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108811693|ref|YP_647460.1| aspartyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145598364|ref|YP_001162440.1| aspartyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149366018|ref|ZP_01888053.1| aspartyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153949743|ref|YP_001401008.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162420653|ref|YP_001606848.1| aspartyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165926395|ref|ZP_02222227.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938888|ref|ZP_02227442.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166009225|ref|ZP_02230123.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210912|ref|ZP_02236947.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401503|ref|ZP_02307000.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420320|ref|ZP_02312073.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424399|ref|ZP_02316152.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167470433|ref|ZP_02335137.1| aspartyl-tRNA synthetase [Yersinia pestis FV-1]
 gi|186895403|ref|YP_001872515.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218929160|ref|YP_002347035.1| aspartyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229894767|ref|ZP_04509947.1| aspartyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229897469|ref|ZP_04512625.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229898116|ref|ZP_04513265.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901975|ref|ZP_04517096.1| aspartyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270490841|ref|ZP_06207915.1| aspartate--tRNA ligase [Yersinia pestis KIM D27]
 gi|294503881|ref|YP_003567943.1| aspartyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|24212411|sp|Q8ZEV0|SYD_YERPE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62287545|sp|Q66AU4|SYD_YERPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|122979648|sp|Q1C820|SYD_YERPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123246529|sp|Q1CJH0|SYD_YERPN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166200153|sp|A4TJK5|SYD_YERPP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166979995|sp|A7FID0|SYD_YERP3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238687248|sp|A9QYX8|SYD_YERPG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238691369|sp|B2K319|SYD_YERPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|21959105|gb|AAM85818.1|AE013828_9 aspartate tRNA synthetase [Yersinia pestis KIM 10]
 gi|51589644|emb|CAH21274.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108775341|gb|ABG17860.1| aspartyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108779344|gb|ABG13402.1| aspartyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115347771|emb|CAL20688.1| aspartyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145210060|gb|ABP39467.1| aspartyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149292431|gb|EDM42505.1| aspartyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152961238|gb|ABS48699.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162353468|gb|ABX87416.1| aspartyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165913251|gb|EDR31874.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165921616|gb|EDR38813.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991780|gb|EDR44081.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166208092|gb|EDR52572.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962015|gb|EDR58036.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167049199|gb|EDR60607.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056281|gb|EDR66050.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|186698429|gb|ACC89058.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|229680871|gb|EEO76966.1| aspartyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229688832|gb|EEO80899.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229693806|gb|EEO83855.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229702240|gb|EEO90259.1| aspartyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262362000|gb|ACY58721.1| aspartyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262365863|gb|ACY62420.1| aspartyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270339345|gb|EFA50122.1| aspartate--tRNA ligase [Yersinia pestis KIM D27]
 gi|294354340|gb|ADE64681.1| aspartyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320015269|gb|ADV98840.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 598

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 220/592 (37%), Positives = 329/592 (55%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    FE A 
Sbjct: 2   RTEYCGQLNLSHVGQSVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAFEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSEP--LPLDSNQINSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKSRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MSADQVREVMEKLVRELWQETKGVD--LGDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
                 EF+VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 SLVKDVEFKVFSGPANDAKGRVAALRVPGGAQLSRKQIDEYGQFVGIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    +AI V    + GD  FF A             R  + ++
Sbjct: 357 RAAGLEGVQSPIAKFLSAEVLDAILVATQAESGDILFFGADSYKIVTDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     +   W++DFP +E ++ E  +   H+PFT P+            +  A  YD
Sbjct: 417 LELTRLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKDMSPEQLAAAPTTAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRTEMQQTVFGILGITEDEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V   
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVVAKK 587


>gi|261378388|ref|ZP_05982961.1| aspartate--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269145159|gb|EEZ71577.1| aspartate--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 602

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 232/605 (38%), Positives = 349/605 (57%), Gaps = 12/605 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFVAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR T+ +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPTMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYIKVND 357

Query: 364 DES----GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +     +     P+ K L+    + I  R   Q+GD  FF A             R  
Sbjct: 358 VSNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKTKVVNEAIGALRIK 417

Query: 420 IAQELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D  +
Sbjct: 418 VGLEYGKDNGYFVDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDPAN 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G PPH
Sbjct: 478 CLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ +   
Sbjct: 538 GGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQKAT 597

Query: 597 KILKI 601
           +  ++
Sbjct: 598 ETKEV 602


>gi|261340251|ref|ZP_05968109.1| aspartate--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288317336|gb|EFC56274.1| aspartate--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 590

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 223/594 (37%), Positives = 328/594 (55%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L  S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRAEALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + +NA + TG +E+ A  + I++ AE   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNVNAEMATGAVEVLASDLVIINRAE--ALPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++RG++ +         +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREVMEALVRGLWNDVKGVE--LGDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLVKSVEFAVFAGPANDAKGRVAALRVPGGASLSRKQIDDYGNFIKIYGAKGLAYIKVTE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLDGITSPVAKFLNADIVEAILERTGAQDGDMIFFGADNKKVVADAMGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + +   +   W++DFP +E ++ E  +   H+PFT P+    +          A  YD
Sbjct: 417 LSLTDETKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPEEAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHSGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+ +V+  +K
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLAELGIEVVKKDEK 589


>gi|311279234|ref|YP_003941465.1| aspartyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308748429|gb|ADO48181.1| aspartyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 590

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 220/593 (37%), Positives = 329/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L  S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F++A 
Sbjct: 2   RTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRVDAFKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R    +N ++ TG++E+ A  + I++ AE   LP+   +   E 
Sbjct: 62  ELRNEFCIQVTGTVRARDERNVNRDMATGEVEVFATDLTIINRAEP--LPLDSNQVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEAMVRQMWLEIKGVD--LGDFPIMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKNVEFAVFAGPANDPKGRVAALRVPGGASLSRKQIDDYGNFIKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN    E I  R   QDGD  FF A +           R  + ++
Sbjct: 357 RANGLDGINSPVAKFLNAEIVEEILARTGAQDGDMIFFGADNKKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   + +   W++DFP +E +  E  +   H+PFT P+    +          A  YD
Sbjct: 417 LSLTAESKWAPLWVIDFPMFEED-GEGGLTAMHHPFTSPKDMTAAELKAAPEEAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRGDMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLAELGIQVVKKEE 588


>gi|156933556|ref|YP_001437472.1| aspartyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|166225344|sp|A7MEB6|SYD_ENTS8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|156531810|gb|ABU76636.1| hypothetical protein ESA_01376 [Cronobacter sakazakii ATCC BAA-894]
          Length = 592

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 223/597 (37%), Positives = 326/597 (54%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F +A 
Sbjct: 2   RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADAFSLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  + +N ++ TG++E+ A ++ I++ AE   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARDEKNVNRDMATGEVEVFATELTIINRAEP--LPLDSNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +    +     F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLIRQLWLDVKGVDLGE--FPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A             R  + ++
Sbjct: 357 RAKGLDGINSPVAKFLNAEIVEAILERTGAQDGDMIFFGADHKKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + +   +   W++DFP +E ++ E  +   H+PFT P+               A  YD
Sbjct: 417 LSLTDEAKWAPLWVIDFPMFE-DDGEGGLSAMHHPFTAPKDMTAEELKAAPEDAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI++     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRGEMQQTVFGILGINEHEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+ +V+      K
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELGIEVVKKASPENK 592


>gi|325134831|gb|EGC57467.1| aspartyl-tRNA synthetase [Neisseria meningitidis M13399]
          Length = 602

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 234/607 (38%), Positives = 354/607 (58%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR T+ +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPTMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKTKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 VAETKEA 602


>gi|261379281|ref|ZP_05983854.1| aspartate--tRNA ligase [Neisseria subflava NJ9703]
 gi|284797715|gb|EFC53062.1| aspartate--tRNA ligase [Neisseria subflava NJ9703]
          Length = 602

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 232/605 (38%), Positives = 346/605 (57%), Gaps = 12/605 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPAMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYIKVND 357

Query: 364 DES----GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +     N     P+ K L+    + I  R   Q+GD  FF A             R  
Sbjct: 358 VSNLSNGENSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKTKVVNEAIGALRIK 417

Query: 420 IAQELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D  +
Sbjct: 418 VGLEHGKDNGYFVDEWKPLWVVDFPMFEYDEEANRYVAVHHPFTAPKEGHEDLMVSDPAN 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G PPH
Sbjct: 478 CLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+ +   
Sbjct: 538 GGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNVVDDKQLRELSLRLRQKAV 597

Query: 597 KILKI 601
           +  + 
Sbjct: 598 ETKEA 602


>gi|152984996|ref|YP_001349894.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|150960154|gb|ABR82179.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 590

 Score =  632 bits (1630), Expect = e-179,   Method: Composition-based stats.
 Identities = 232/593 (39%), Positives = 331/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLD+RD  G+ QVV +PD    F  A 
Sbjct: 2   RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDVRDREGLAQVVFDPDRAETFAKAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R     N N+ +G IE+   ++E+L+ AE  P P+    +  E 
Sbjct: 62  RVRSEFVVKITGRVRLRPEGARNPNMASGSIEVLGYELEVLNQAETPPFPLDEYSDVGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  +   +  R RI +S+R  +    F++  TPIL   +PEGARD+LVP
Sbjct: 122 TRLRYRFIDLRRPEMAAKLKLRARITSSIRRYLDDNGFLDVETPILGRPTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR   G F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYPGHFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI+   E ++R +F+E          F  + +++A+RRYG+DKPDLR P+ + +V 
Sbjct: 241 LDESDIIAITEKMVRQLFKEVLGVEFDE--FPHMPFEEAMRRYGSDKPDLRIPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G              R+  D   ++    G  GLAYI    
Sbjct: 299 DQLQEVEFKVFSGPANDPKGRVAALRVPGAASMPRSQIDDYTKFVGIYGAKGLAYIKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +   N   I  R+   DGD  FF A      C      R  +  +
Sbjct: 359 RAKGVEGLQSPIVKFIPEANLNVILDRVGAVDGDIVFFGADKARIVCDALGALRIKVGHD 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++    +   W++DFP +E N++   +   H+PFT P+     L+ N   +  +  YD
Sbjct: 419 LKLLTKE-WAPMWVVDFPMFEENDD-GSLSALHHPFTSPKCTPAELEAN-PGAALSRAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H   +    F  +GI +   E +FG L  A + G PPHGG+A G+
Sbjct: 476 MVLNGTELGGGSIRIHDKAMQQAVFRVLGIDEAEQEEKFGFLLDALKYGAPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA ++REV  FP +Q+  D++  +P +V  + LREL +R+ E PK
Sbjct: 536 DRLVMLMTGASSIREVIAFPKTQSAGDVMTQAPGSVDGKALRELHIRLREQPK 588


>gi|254805506|ref|YP_003083727.1| Aspartyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254669048|emb|CBA07519.1| Aspartyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 602

 Score =  632 bits (1629), Expect = e-179,   Method: Composition-based stats.
 Identities = 231/607 (38%), Positives = 351/607 (57%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +     F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVD--LGGFPRMPYAEAMFYYGSDKPDMRIGLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   ++GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAENGDIIFFGADKAKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AAETKEA 602


>gi|239637565|ref|ZP_04678537.1| aspartyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596783|gb|EEQ79308.1| aspartyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 588

 Score =  632 bits (1629), Expect = e-179,   Method: Composition-based stats.
 Identities = 233/592 (39%), Positives = 337/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD       I
Sbjct: 3   KRTTYCGLVTEDLLNEKVTLKGWVHNRRDLGGLIFIDLRDREGIVQIVFNPDFSQEALNI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+++ + G+V  R AET+N  I TGQ+E+    IEI++ +E             
Sbjct: 63  AETVRSEYIVEVQGVVTKRDAETVNPKIKTGQVEVQVSNIEIINKSETPPFSINEENTNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDDNGFYDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +LR V ++    + V   F R+ Y +A+ RYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVMAMGEEMLRKVVKDVKGID-VPGPFPRMTYSEAMSRYGSDKPDTRFDMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV++     +F+VF   +  N   +            R   D + E+    G  GLA++ 
Sbjct: 301 NVSQLGHDMDFKVFKDTVENNGEIKAIVAKDAADQYTRKDMDALTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                  +    GP+A+     +TE ++   +   GD   F+A  P          R  +
Sbjct: 361 VT-----DEGLTGPIARFFEDKDTEQLKSLTEASAGDLVMFVADKPEVVAQSLGALRIKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+ +   F W+ D+P  E+++E K+   AH+PFT P+        ++  + +A 
Sbjct: 416 AKELGLIDESKLNFLWVTDWPLLEYDDESKRYVAAHHPFTSPKKEDIEKLDSEPENAQAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHNGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSEKQLEELSLRIR 587


>gi|26987948|ref|NP_743373.1| aspartyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|148546485|ref|YP_001266587.1| aspartyl-tRNA synthetase [Pseudomonas putida F1]
 gi|37999411|sp|Q88NJ4|SYD_PSEPK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225378|sp|A5VZU3|SYD_PSEP1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|24982660|gb|AAN66837.1|AE016312_8 aspartyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|148510543|gb|ABQ77403.1| aspartate--tRNA(Asn) ligase [Pseudomonas putida F1]
 gi|313497564|gb|ADR58930.1| AspS [Pseudomonas putida BIRD-1]
          Length = 591

 Score =  632 bits (1629), Expect = e-179,   Method: Composition-based stats.
 Identities = 233/593 (39%), Positives = 338/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRAETFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R    +NAN+ +G IE+   ++ +L+ AE  P P+    +  E 
Sbjct: 63  RVRSEYVVQITGKVRKRPEGAVNANMASGAIEILGYQLNVLNEAETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  +   +  R+RI +S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMADKLRLRSRITSSIRRFLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ +I+   E+++R +F+E  +       F  + +++A+RRYG+DKPDLR P+ + +V 
Sbjct: 242 LDESEIMGLTESMIRKLFKEVLDLEFGE--FPHMTFEEAMRRYGSDKPDLRIPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF+   +             G    R+  D   ++    G  GLAYI    
Sbjct: 300 DQLKDVDFKVFAGPANDPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K++   N   I  R+   DGD  FF A             R  +  +
Sbjct: 360 RAKGVEGLQSPIVKNIPEANLNNILDRVGAVDGDIVFFGADKFKVVSEALGALRIRLGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++ C  +   W++DFP +E NE+       H+PFT P+   E L+ N   +  +  YD
Sbjct: 420 FELLTCE-WAPMWVVDFPMFEENED-GSFTALHHPFTAPKCTPEELEAN-PATALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI  E  E +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGIEAEEQEEKFGFLLDALKFGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+   ++  +P  V  + LREL +R+ E  K
Sbjct: 537 DRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGMVDAKALRELHIRLREQTK 589


>gi|261401382|ref|ZP_05987507.1| aspartate--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269208589|gb|EEZ75044.1| aspartate--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 602

 Score =  632 bits (1629), Expect = e-179,   Method: Composition-based stats.
 Identities = 232/607 (38%), Positives = 353/607 (58%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYSEAMFYYGSDKPDMRIGLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGADKTKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+E+  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEVGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 ATETKEA 602


>gi|317491783|ref|ZP_07950218.1| aspartyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920217|gb|EFV41541.1| aspartyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 596

 Score =  632 bits (1629), Expect = e-179,   Method: Composition-based stats.
 Identities = 219/599 (36%), Positives = 328/599 (54%), Gaps = 7/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L +S  G  V L GWVHR R  GG+IF+D+RD  G+ QV  +PD    F+ A 
Sbjct: 2   RTNYCGQLNLSHEGQEVTLCGWVHRRRDLGGLIFIDLRDREGVVQVFFDPDHQEAFQQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R     N  + TG++E+    + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCVQITGTVRARPDSQKNKEMSTGEVEVFGHALTIINRSEP--LPLDFNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R RI   +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 NRLKYRYLDLRRPEMAQRLKTRARITAFVRRFMDNHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME + R +++E    +     F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MSAEQVREVMEELARSLWQEIKGVD--LGKFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G  +      G    R   D   ++    G  GLA++    
Sbjct: 297 DLVKDVDFKVFSGPANDPKGRVIALRVPGGAHLTRKIIDEYGQFVSIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    E+I  R   Q  D  FF A             R  + +E
Sbjct: 357 RAAGMEGVQSPIAKFLNADVLESILERTGAQSEDILFFGADTSKIATDAMGALRLKVGRE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + N + +   W++DFP +E ++ E  +   H+PFT P+    +      +   A  YD
Sbjct: 417 LKLTNEDSWAPLWVIDFPMFE-DDGEGGLAAMHHPFTAPRDISPAELKAHPVGAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++   ++FG L  A + G PPH G+A G+
Sbjct: 476 MVMNGYEVGGGSVRIHNGEMQETVFGILGITEQEQRDKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           DR+VMLL G  N+R+V  FP +    D L  +PS  +   L+EL + +V       +  
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAADPLTDAPSFANPASLQELSISVVAKKGSADEAE 594


>gi|254672563|emb|CBA06197.1| Aspartyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 602

 Score =  632 bits (1629), Expect = e-179,   Method: Composition-based stats.
 Identities = 232/607 (38%), Positives = 351/607 (57%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +     F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVD--LGGFPRMPYAEAMFYYGSDKPDMRIGLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKTKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AAETKEA 602


>gi|323464279|gb|ADX76432.1| aspartyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 588

 Score =  632 bits (1629), Expect = e-179,   Method: Composition-based stats.
 Identities = 236/592 (39%), Positives = 332/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +    +   V L GWVH  R  GG+IF+D+RD  G  QVV NP       E+
Sbjct: 3   KRTTYCGSVTEELLEQEVTLKGWVHNRRDLGGLIFVDVRDREGYVQVVFNPAFSKEALEV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EY 120
           A+ +RSE+V+ I G V  R  ETIN  I TGQ+E+ A+ IEI++ +E  P  +  E    
Sbjct: 63  AERIRSEYVVEITGTVTKRDDETINPKIKTGQVEVQAKSIEIINQSETPPFSINEENLNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR+ L +    R +I  S+R  +  + F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRREKLAQTFKMRHQITRSIRQFLDGDGFYDVETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQIDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D++   E +++ V  +          F R+ Y +A+ RYGTDKPD R  + + 
Sbjct: 242 MSFVEQEDVMQLGEAMVKNVLADVKGIEMTDA-FPRMTYTEAMSRYGTDKPDTRFGMELL 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E     +F+VF   +      +   +        R   D + E+    G  GLA++ 
Sbjct: 301 DVSELGQIMDFKVFKGAVESGGQVKALVVENAAADYTRKDIDGLTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+A+     +   ++     + GD   F+A             RN +
Sbjct: 361 VVED-----GLNGPIARFFEDAHVTKLQALTGAKAGDLVLFVADSKDVVAQSLGALRNKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +E G+I+   + F W+ D+P  E++EE ++   AH+PFT P+     L        +A 
Sbjct: 416 GKERGLIDPEQYNFLWVTDWPLLEYDEEARRYVAAHHPFTSPKVEDIDLLETAPEQAQAQ 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NGFE+  G IR H  E+  + F  +G S E  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDLVLNGFELGGGSIRIHDGELQQRMFKALGFSDEAAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR VM+L G  N+R+   FP + +  DL+  +PS VS  QL EL LRI 
Sbjct: 536 LGLDRFVMILSGRTNLRDTIAFPKTASATDLMTDAPSPVSERQLDELSLRIK 587


>gi|163942152|ref|YP_001647036.1| aspartyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229013620|ref|ZP_04170751.1| Aspartyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229135226|ref|ZP_04264025.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|229169145|ref|ZP_04296860.1| Aspartyl-tRNA synthetase [Bacillus cereus AH621]
 gi|229470553|sp|A9VIM8|SYD_BACWK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|163864349|gb|ABY45408.1| aspartyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228614373|gb|EEK71483.1| Aspartyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228648268|gb|EEL04304.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228747679|gb|EEL97551.1| Aspartyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 591

 Score =  632 bits (1629), Expect = e-179,   Method: Composition-based stats.
 Identities = 229/581 (39%), Positives = 336/581 (57%), Gaps = 9/581 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQASKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPAMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL  ME ++  V ++      VS  F R+ Y DA+ R+G+DKPD R  + + ++
Sbjct: 243 FLTQDEILEMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARFGSDKPDTRFEMELKDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E  V   F+VF+  +      +           +R   D + E+A+  G  GLA++   
Sbjct: 302 SEFAVGCGFKVFTSAVENGGQVKAINAKGAASKYSRKDIDALTEFAKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK         +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEEANVLMSTLEADAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  Q
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQ 577


>gi|240113392|ref|ZP_04727882.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240118546|ref|ZP_04732608.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|254494275|ref|ZP_05107446.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268599465|ref|ZP_06133632.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268604256|ref|ZP_06138423.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|226513315|gb|EEH62660.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268583596|gb|EEZ48272.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268588387|gb|EEZ53063.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 602

 Score =  631 bits (1628), Expect = e-179,   Method: Composition-based stats.
 Identities = 234/607 (38%), Positives = 355/607 (58%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +G  V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLGITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +++GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGADKAKVVNEAVGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AVETKEA 602


>gi|15802279|ref|NP_288303.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|12515925|gb|AAG56856.1|AE005409_1 aspartate tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
          Length = 590

 Score =  631 bits (1628), Expect = e-179,   Method: Composition-based stats.
 Identities = 221/593 (37%), Positives = 328/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K R+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKXRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLRSVEFAVFAGPANDPKGRVAALCVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL + +V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELSIXVVKKAE 588


>gi|110833610|ref|YP_692469.1| aspartyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|123050640|sp|Q0VRK1|SYD_ALCBS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110646721|emb|CAL16197.1| aspartyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 587

 Score =  631 bits (1628), Expect = e-179,   Method: Composition-based stats.
 Identities = 230/592 (38%), Positives = 337/592 (56%), Gaps = 8/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CGDL  S  G  V L GWV R R HGG+IFLD+RD  G+ QVV +PD+   F +A 
Sbjct: 2   RSHYCGDLRASHDGETVELCGWVSRRRDHGGVIFLDLRDRNGLVQVVFDPDTVDAFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V  R     N  + TG IE+  +++ IL+ AE  P  +       E 
Sbjct: 62  KVRSEYVVRLSGRVRMRDESVRNNKMATGDIEVLGKELTILNEAETPPFELDAHSAAGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR++DLRR  + KN   R+R+ + +R  +  E F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKYRYMDLRRPDVLKNFQFRSRLTHVVRAFLEGEGFMDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDLEASF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE++DI+   E ++R VF+E  + +     F R+ + +A++R+G+DKPDLR  + + ++ 
Sbjct: 241 VEEEDIMGITERMVRSVFKELLSVDLPD--FPRMPFSEAMQRFGSDKPDLRIALELIDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G   +R   D   ++    G  GLAYI    
Sbjct: 299 DLLAGVDFKVFSGPANDPKGRVAAMRVPGGCSLSRKDIDGYTKFVSIYGAKGLAYIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K L     + I  R   + GD  FF A             R  +  +
Sbjct: 359 LAAGAEGLQSPILKFLTEDAIKGILERTGAETGDLIFFGADKAKIVNEALGALRVKVGHD 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++    +   W++DFP +E  E+E +    H+PFTMP    E LK ++     +  YD
Sbjct: 419 LNLV-EGEWAPLWVVDFPMFE--EDEGQYHALHHPFTMPSCSAEELK-SNPGEALSRAYD 474

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H   +    F  +GIS E  E +FG L    + G PPHGG+A G+
Sbjct: 475 MVLNGTELGGGSIRIHSPAMQRTVFEALGISDEEAEEKFGFLLDGLKYGAPPHGGLAFGL 534

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VML+ G +++R+V  FP +Q     +  +PS V  +QLRE+G+++ +  
Sbjct: 535 DRMVMLMTGCESIRDVIAFPKTQTAACTMTNAPSPVDNKQLREVGVQVRKEE 586


>gi|240126291|ref|ZP_04739177.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268684875|ref|ZP_06151737.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268625159|gb|EEZ57559.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 602

 Score =  631 bits (1628), Expect = e-179,   Method: Composition-based stats.
 Identities = 234/607 (38%), Positives = 355/607 (58%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +G  V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLGITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +++GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGADKAKVVNEAVGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AVETKEA 602


>gi|325128778|gb|EGC51640.1| aspartyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 602

 Score =  631 bits (1628), Expect = e-179,   Method: Composition-based stats.
 Identities = 231/607 (38%), Positives = 351/607 (57%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +     F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVD--LGGFPRMPYAEAMFYYGSDKPDMRIGLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   ++GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAENGDIIFFGADKAKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AAETKEA 602


>gi|189424681|ref|YP_001951858.1| aspartyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189420940|gb|ACD95338.1| aspartyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 598

 Score =  631 bits (1628), Expect = e-179,   Method: Composition-based stats.
 Identities = 240/597 (40%), Positives = 343/597 (57%), Gaps = 12/597 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACF 59
           +  R+  CG L   D+G  V L GW  R R HGG+IF+D+RD  GI QVV +P+  ++  
Sbjct: 6   NWKRSDYCGCLTAQDIGREVVLMGWALRRRDHGGLIFIDLRDREGIAQVVFDPEVNASAH 65

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           ++A+ VRSE+VL I G V+ R   T+N N+ TG++E+   + ++L+ ++ LP  +    E
Sbjct: 66  QVAEGVRSEYVLAIKGKVIPRPEGTVNPNMKTGEVEIQVAECKLLNRSKALPFMLDEHSE 125

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+IR KYR+LD+RR  L +N++ R ++    R  +    F+E  TP LT S+PEGARD
Sbjct: 126 VNENIRLKYRYLDMRRPQLAQNLILRHQVAQVTRQYLTDNGFLELETPFLTKSTPEGARD 185

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR+NQG FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D 
Sbjct: 186 FLVPSRINQGQFYALPQSPQIFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQIDC 244

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++++DI+  ME ++  VF+E      V     R+ Y +AIRR+G D PDLR  + +
Sbjct: 245 EMSFIDREDIITVMEGLIARVFKEAKGVE-VQLPVERMTYQEAIRRFGVDNPDLRFGLEL 303

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAY 358
             +T+    S F+VF+++ +     +   I AKG    +R   + +  +    G  GLAY
Sbjct: 304 VELTDIVKGSGFKVFNEVAANGGIIK--GINAKGCATFSRKDIEDLTSFVSIYGAKGLAY 361

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +              P+ K        A+      ++GD   F+A  P          RN
Sbjct: 362 VKVTA-----EGWQSPITKFFTEAEIAAMNGSFGAEEGDLLLFVADKPKVVNDSLGKLRN 416

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A  L + + N F F WI DFP +EW+E++K+    H+PFT P         +D    +
Sbjct: 417 QLASLLKLTDPNVFRFVWITDFPLFEWDEDDKRWCAVHHPFTAPMDEDVDYVESDPGRCR 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG EI  G IR H   V    F  +G S+E    +FG L  A + G PPHGG
Sbjct: 477 AKAYDLVLNGNEIGGGSIRIHQEHVQSLMFKMLGHSEEDKRAKFGFLLDALEYGTPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DR++MLL G+ ++R+V  FP +Q    L+  +PS V  +QLRELG+R+    
Sbjct: 537 IAFGMDRLIMLLTGSDSIRDVIAFPKTQKGTCLMSEAPSAVDAKQLRELGVRLATPA 593


>gi|322382957|ref|ZP_08056789.1| aspartyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153077|gb|EFX45535.1| aspartyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 595

 Score =  631 bits (1628), Expect = e-179,   Method: Composition-based stats.
 Identities = 239/597 (40%), Positives = 350/597 (58%), Gaps = 10/597 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            Y+T +CGD+   ++G  V L+GWV R R  GG++F+D+RD  GI Q+V NP       E
Sbjct: 2   MYKTANCGDITKQNIGETVILNGWVQRRRDLGGVLFIDLRDRSGIVQIVFNPAYSGDALE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A   R+E+VL + G V+ RS ET+N NI  G IE+   +IE+++ A+  P  +    + 
Sbjct: 62  VADRARNEYVLAVKGTVVERSEETVNPNIPNGDIEVHITEIEVMNTAKNPPFFIEDGIDI 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            ES+R KYR+LDLRR  + K ++ R +++   R  +  + FI+  TPILT S+PEGARD+
Sbjct: 122 DESLRLKYRYLDLRRPEMQKTLMLRAKVVKIFRDYLDEQGFIDIETPILTKSTPEGARDY 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G F+ALPQ+PQQ+KQLLM SG +RY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 182 LVPSRVHPGEFFALPQSPQQFKQLLMVSGVERYYQIARCFRDEDLRADRQP-EFTQVDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ QD +L+ ME ++  +  E      VS  F R+ Y +A+ +YG+DKPDLR  + + 
Sbjct: 241 TSFLSQDQLLDMMEELMVKLVRETVGVE-VSRPFQRLTYAEAMDKYGSDKPDLRFGMELV 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +++     SE +VFS  L      +       G   +R   D +  +A   G  GLA+I 
Sbjct: 300 DLSGLLADSEAKVFSAALKTGGEVKALNAKGCGT-WSRKEIDDLAPFAMRYGAKGLAWIQ 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +  +       GP+ K ++     AIR RL  ++GD   F A           + R  I
Sbjct: 359 IKEGQ-----MKGPIVKFMSEEEQTAIRERLRAEEGDLLLFSADTKKIVADVLGNLRLKI 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + LG+I+ + F+F W++DFP   ++EE+K+    H+PFT P+     L  +D   I+  
Sbjct: 414 GRRLGLIDDSIFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKDEDLDLFDSDPGQIRGQ 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G  R    +V  + F  +G S+E  +++FG L  AF+ G PPHGGIA
Sbjct: 474 AYDLVLNGYEVGGGSQRIFKRDVQEKMFKALGFSQEEAKDKFGYLLDAFEYGTPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G DR+VMLL G  N+RE   FP + +   LLM +P  V   QL +L ++I+   KK
Sbjct: 534 FGFDRLVMLLAGRSNLRETIAFPKTASATCLLMDAPGEVDAGQLEQLSIKIMGKRKK 590


>gi|313667849|ref|YP_004048133.1| aspartyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313005311|emb|CBN86744.1| aspartyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 602

 Score =  631 bits (1628), Expect = e-179,   Method: Composition-based stats.
 Identities = 233/607 (38%), Positives = 353/607 (58%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLGITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYSEAMFYYGSDKPDMRIGLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKAKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 VAETKEA 602


>gi|302871213|ref|YP_003839849.1| aspartyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574072|gb|ADL41863.1| aspartyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 594

 Score =  631 bits (1628), Expect = e-179,   Method: Composition-based stats.
 Identities = 232/590 (39%), Positives = 339/590 (57%), Gaps = 9/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG++ + DVG  V L+GWV   R  GGIIF+D+RD  GI QVV +        + 
Sbjct: 8   KRTKYCGEVSLEDVGKEVVLTGWVDTRRDLGGIIFVDLRDRTGIVQVVFDEKMGEELLDK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+RSE+ + I G+V  R  ETIN  I TG++E+ AQ++ I S +E  P P+       
Sbjct: 68  ADSLRSEYCIGIRGIVEKRPPETINPKIKTGEVEVRAQELRIFSKSETPPFPIEEGINVN 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  + KN++ R ++   +R  +    FIE  TP+LT S+PEGARD+L
Sbjct: 128 EAVRLKYRYLDLRRPDMQKNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G F+ALPQ+PQ +KQLLM +GFDRYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 188 VPSRIFPGKFFALPQSPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDIEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD++   E +L+ +F E    + +     R+ Y +A+ R+G+DKPD R  + + N
Sbjct: 247 SFVDVDDVIEINERLLQTIFGEMLGID-LKLPLPRLTYKEAMERFGSDKPDTRFGMELVN 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+   + EF+VF+   +                 +R   D + E+A++ G  GLA+I  
Sbjct: 306 LTDIAKNCEFKVFADAANKGGSVRAINAKGCAITFSRREIDALVEYAKNFGAKGLAWIAV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D         P+ K L       I  RL  + GD   F A           + R  IA
Sbjct: 366 ESD-----GLKSPIVKFLKEEEINEILKRLGAEVGDLLLFSADKDEIVFDVLGNIRLEIA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +++ + F   W+ +FP +E++EEE +    H+PFT P          D   +++  
Sbjct: 421 RKLNLLDKSKFNLLWVTEFPLFEYSEEEGRYVAKHHPFTSPMDEDIEFLETDPAKVRSKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H +E+  + F  +G ++E  ++RFG L  AF+ G PPHGGIA 
Sbjct: 481 YDIVLNGTEIGGGSIRIHSTELQKRMFKALGFTEERAQDRFGFLLEAFKYGTPPHGGIAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR+ MLLLG  ++R+   FP  ++    L  +PS V  +QLREL +++
Sbjct: 541 GFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLRELHIKV 590


>gi|170723163|ref|YP_001750851.1| aspartyl-tRNA synthetase [Pseudomonas putida W619]
 gi|229470564|sp|B1JD74|SYD_PSEPW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169761166|gb|ACA74482.1| aspartyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 591

 Score =  631 bits (1628), Expect = e-179,   Method: Composition-based stats.
 Identities = 233/593 (39%), Positives = 338/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRAETFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R    +NAN+ +G IE+   ++ +L+ AE  P P+    +  E 
Sbjct: 63  RVRSEYVVQITGKVRKRPDGAVNANMASGAIEILGYQLNVLNEAETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  +   +  R+RI +S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMADKLRLRSRITSSIRRFLDENGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ +I+   E+++R +F+E  +       F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LDESEIMGLTESMIRKLFKEVLDLEFGE--FPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF+   +             G    R+  D   ++    G  GLAYI    
Sbjct: 300 DQLKDVDFKVFAGPANDPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGARGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K++   N   I  R+   DGD  FF A             R  +  +
Sbjct: 360 RAKGVEGLQSPIVKNIPEANLNVILDRVGAVDGDIVFFGADKFKVVSEALGALRIRLGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++ C  +   W++DFP +E NE+       H+PFT P+   E L+ N   +  +  YD
Sbjct: 420 FELLTCE-WAPMWVVDFPMFEENED-GSFTALHHPFTAPKCTPEELEAN-PATALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI     E +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHRKEMQQAVFRLLGIEAAEQEEKFGFLLDALKFGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+   ++  +P  V  + LREL +R+ E  K
Sbjct: 537 DRLVMLMTGAQSIREVIAFPKTQSAACVMTQAPGLVDAKALRELHIRLREQTK 589


>gi|161870607|ref|YP_001599780.1| aspartyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|189082106|sp|A9M257|SYD_NEIM0 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|161596160|gb|ABX73820.1| aspartyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 602

 Score =  631 bits (1628), Expect = e-178,   Method: Composition-based stats.
 Identities = 233/607 (38%), Positives = 353/607 (58%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPAMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKTKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AAETKEA 602


>gi|163814884|ref|ZP_02206272.1| hypothetical protein COPEUT_01035 [Coprococcus eutactus ATCC 27759]
 gi|158449823|gb|EDP26818.1| hypothetical protein COPEUT_01035 [Coprococcus eutactus ATCC 27759]
          Length = 605

 Score =  631 bits (1628), Expect = e-178,   Method: Composition-based stats.
 Identities = 229/594 (38%), Positives = 342/594 (57%), Gaps = 11/594 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60
            R+H C ++  +++G  V + GWV + R  GGIIF+D+RD  GI QV+         CF+
Sbjct: 9   KRSHRCTEVNSTNIGEKVTVMGWVAKSRNKGGIIFVDLRDRSGILQVIFEEAQCGTECFD 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ I+G V  R A  +N N+ TG IE+ A  + ILS AE  P P+    + 
Sbjct: 69  KAGKLRSEFVVAIEGTVCKR-AGAVNENLATGDIEVVATSLRILSEAETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  L +N++ ++++    R  M  E F+E  TP+LT S+PEGARD+
Sbjct: 128 KEELRLKYRYLDLRRPDLQRNLMMKSKVAGIARQFMADEGFLEIETPMLTKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQIARCFRDEDLRADRQP-EFTQMDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ +D+++  E +L  +F+E  + +       R+ + +A+ R+G+DKPDLR  + + 
Sbjct: 247 LSFVDVEDVIDVNERLLAKLFKEVLDLDI-QLPIQRMTWQEAMDRFGSDKPDLRFGLELK 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++      F VF+  L             +G    R   D + E+A++ G  GLAYI 
Sbjct: 306 DVSDIVKDCGFGVFTGALENGGTVRGINAEGQG-SMPRKKIDALIEYAKTYGAKGLAYIV 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D     +     AK +      A+   ++ + GD   F A       +     R H+
Sbjct: 365 INEDG----SYKSSFAKFMTDEQMSALVNAMEGKPGDLLLFAADKKKVVWTVLGALRCHL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ +G+++ N F F WI +FP  EW++EE +    H+PFTMP         +D   ++A 
Sbjct: 421 AELMGLVDKNEFRFVWITEFPLLEWSDEENRFTAMHHPFTMPMEEDLQYIDSDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H ++V  + F  +G +K     RFG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIHQNDVQEKMFECLGFTKAQAHERFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+VML+    ++R+V  FP  ++    +  +P  V  +QL ELG+ +   
Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASCPMTNAPDRVDDKQLAELGIEVSPE 594


>gi|319400956|gb|EFV89175.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 588

 Score =  631 bits (1628), Expect = e-178,   Method: Composition-based stats.
 Identities = 237/595 (39%), Positives = 343/595 (57%), Gaps = 11/595 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M++ RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD     
Sbjct: 1   MNK-RTTYCGLVTEEFLNEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGE 117
            ++A++VRSE+V+ + G+V  R AETIN  I TGQ+E+    IEI++ +E          
Sbjct: 60  LQVAETVRSEYVVEVQGVVTKRDAETINPKIKTGQVEVQVSNIEIINKSETPPFSINEEN 119

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGA
Sbjct: 120 VNVDENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGA 179

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+
Sbjct: 180 RDYLVPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQV 238

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV+Q+DI+   E++LR V ++    + VS  F R+ Y +A+ RYG+DKPD R  +
Sbjct: 239 DIEMSFVDQEDIIAMGEDMLRKVVKDVKGID-VSGPFPRMTYAEAMDRYGSDKPDTRFGM 297

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + NV++      F+VF   +  N   +            R   D + E+    G  GLA
Sbjct: 298 ELINVSQLGKEMNFKVFKDTVDNNGEIKAIVAKDAADKYTRKDMDALTEFVNIYGAKGLA 357

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++    D        GP+A+     N E ++   + + GD   F+A  P          R
Sbjct: 358 WVKVVDD-----GLSGPIARFFEDTNVETLKQLTEAKPGDLVMFVADKPNVVAQSLGALR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ELG+I+ +   F W+ D+P  E++E+ K+   AH+PFT P+         +  ++
Sbjct: 413 IKLAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEPENV 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G IR H  E+  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 473 QANAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFTNEQAQEQFGFLLDAFKYGAPPHG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIA G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL+EL LRI 
Sbjct: 533 GIALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLQELSLRIR 587


>gi|293375174|ref|ZP_06621461.1| aspartate--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292646211|gb|EFF64234.1| aspartate--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 585

 Score =  631 bits (1628), Expect = e-178,   Method: Composition-based stats.
 Identities = 225/592 (38%), Positives = 353/592 (59%), Gaps = 12/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           RTH+ G+L + +VG  V L GWV + R  GG++F+D+RD YG+TQ+VANP+       E+
Sbjct: 3   RTHNNGELRLENVGQVVELKGWVAKSRNLGGLVFIDLRDRYGMTQLVANPETVSPEVLEV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  VR+E+V+ + G+V  R ++  N N+ TG IE+  +++ I+S AE  PL +  E +  
Sbjct: 63  ANKVRNEYVIAVKGIVAERQSK--NPNMPTGDIEVVLEQLTIISEAEMTPLIIADETDAL 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR  + KN + R  I+ S+R  + +++FIE  TP L  S+PEGARD+L
Sbjct: 121 EDTRLKYRYLDLRRPMMQKNFILRHNILKSVRSYLDSQDFIEVETPYLNKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGF+RY+Q+A CFRDED R+DR P EF Q+D+E 
Sbjct: 181 VPSRVHEGEFYALPQSPQIFKQLLMVSGFERYYQVARCFRDEDLRADRQP-EFTQIDIET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q++I+N +E +L  + ++    +     F R+ Y++A+ RYG+DKPD R  + +  
Sbjct: 240 SFLTQEEIMNLVEEMLVKMMKDVKGLDI-PRPFPRLSYEEAMGRYGSDKPDTRFEMELIP 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +     +  F VF+  +      +   +       +R   D++ ++ +     GLA++  
Sbjct: 299 LNHVVANCGFSVFASTVEAGNEVKALCVKGAAERFSRKDIDKLTDFVKKYKAKGLAWVKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                      GP+AK  N     +I+   + + GD   F+A             R H+A
Sbjct: 359 V-----EEGFNGPIAKFFNEDEVASIKAATNAEIGDLLLFVADTKAVVADSLGALRLHLA 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +ELG+I+ + F F W++D+P +E++EE  +   AH+PFTMP          D  + KA  
Sbjct: 414 KELGLIDESKFNFLWVIDWPLFEYDEEAGRFFAAHHPFTMPSLDTLDTFDTDSHNAKAQA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  ++  + F  +G +KE  E +FG L  AF+ G PPHGG+A 
Sbjct: 474 YDIVLNGYELGGGSLRIYRPDIQSRMFEALGFTKEEAEEQFGFLMNAFKYGTPPHGGLAL 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G+DRI M+L G++++R+V  FP + +    +  +P  VS  QL EL +++ +
Sbjct: 534 GLDRIAMILTGSQSLRDVIAFPKNASATCPMTEAPGRVSEAQLTELHIQLKK 585


>gi|331007229|ref|ZP_08330436.1| Aspartyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418945|gb|EGG93404.1| Aspartyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 597

 Score =  631 bits (1628), Expect = e-178,   Method: Composition-based stats.
 Identities = 227/590 (38%), Positives = 336/590 (56%), Gaps = 11/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CG L    +   V L GWV R R HGG+IF+D+RD  GI QVV +PD    F +A 
Sbjct: 2   RSEYCGALNTEFIDQTVTLCGWVDRRRDHGGVIFIDLRDRDGIVQVVFDPDGKENFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL + G V +R+  T+N N+ TG++E+    + IL+ +E  P P+       E 
Sbjct: 62  KVRSEYVLQVTGKVRARNGATVNKNMPTGEVEVYGTDLVILNASETPPFPLNEHNTVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R+LDLRR  +  N+  R+++  +MR  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKFRYLDLRRQEMQNNLRIRSKVTTAMRNYLDDNGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHEGKFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  ++I++  E ++  +F+  S  +    +F R+ Y +AI +YG+DKPDLR P+ + ++ 
Sbjct: 241 MSDEEIMSVTEGMINALFK--SQMDIELGSFPRMPYSEAIAKYGSDKPDLRIPLELVDIK 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFW 361
           +     EF+VFS   + +P   + AI   GG     R   D   ++    G  GLAYI  
Sbjct: 299 DLLTDVEFKVFSGP-ANDPNGRIAAINISGGNDKLTRKQIDAYTKFVGIYGAKGLAYIKV 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              +        P+ K L      AI  RL  ++GD  FF A             R  + 
Sbjct: 358 NDKDDIENGLQSPIVKFLPNDVRTAIVERLGAENGDLIFFGADKANIVTESLGALRCKLG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +  C  +   W++DFP +E  E +      H+PFT P    E+LK N      +  
Sbjct: 418 EDLDLYTCE-WAPLWVVDFPMFE--ETDAGWTSLHHPFTAPACSPEALKAN-PGEALSVA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  ++    F  +GI +E    +FG L  A Q G PPHGG+A 
Sbjct: 474 YDMVLNGTELGGGSIRIHDPKMQQTVFEILGIGEEEQREKFGFLLDALQYGAPPHGGLAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++ML+ G+ ++R+V  FP +Q    ++  +P  V  +QLREL + +
Sbjct: 534 GLDRLIMLMTGSGSIRDVIAFPKTQTAACVMTDAPGGVDRKQLRELNIAL 583


>gi|229062097|ref|ZP_04199422.1| Aspartyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717249|gb|EEL68924.1| Aspartyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 591

 Score =  631 bits (1627), Expect = e-178,   Method: Composition-based stats.
 Identities = 229/581 (39%), Positives = 337/581 (58%), Gaps = 9/581 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG + V  VG  V+L GWV + R  GG+IF+D+RD  GI QVV NP+      E+A
Sbjct: 4   RTHACGKVTVEAVGQTVQLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPETSKEALEVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL ++G V+ R    IN N+ TG+IE+ A K+ +L+ A+  P+ +  + +  E
Sbjct: 64  ETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQASKVNVLNAAKTTPIIIADDTDASE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +      R  +  ++R  +  E F+E  TPILT S+PEGARD+LV
Sbjct: 124 DVRLKYRYLDLRRPAMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E S
Sbjct: 184 PSRVHDGEFYALPQSPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQP-EFTQIDIEAS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ QD+IL  ME ++  V ++      VS  F R+ Y DA+ R+G+DKPD R  + + ++
Sbjct: 243 FLTQDEILEMMERMMTKVMKDAKGVE-VSAPFPRMKYADAMARFGSDKPDTRFEMELKDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E  V   F+VF+  +      +           +R   D + E+A+  G  GLA++   
Sbjct: 302 SEFAVGCGFKVFTSAVENGGQVKAINAKGAASKYSRKDIDALTEFAKVYGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK     +   +   L+   GD   F+A             R  + +
Sbjct: 362 ED-----GLKGPIAKFFGEEDANVLMSTLEADAGDLLLFVADKKSVVADSLGALRLRLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+ + F F W+ D+P  E++E+  +   AH+PFTMP      L        +A  Y
Sbjct: 417 ELELIDESKFNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G +R +  +V  + F  +G S+E  + +FG L  AF+ G PPHGGIA G
Sbjct: 477 DLVLNGYELGGGSLRIYERDVQEKMFKALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
           +DR+VMLL G  N+R+   FP + +   LL  +PS V+  Q
Sbjct: 537 LDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPSPVAEAQ 577


>gi|319892683|ref|YP_004149558.1| Aspartyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162379|gb|ADV05922.1| Aspartyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
          Length = 588

 Score =  631 bits (1627), Expect = e-178,   Method: Composition-based stats.
 Identities = 235/592 (39%), Positives = 331/592 (55%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +    +   V L GWVH  R  GG+IF+D+RD  G  QVV NP       E+
Sbjct: 3   KRTTYCGSVTEELLEQEVTLKGWVHNRRDLGGLIFVDVRDREGYVQVVFNPAFSKEALEV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EY 120
           A+ +RSE+V+ I G V  R  ETIN  I TGQ+E+ A+ IEI++ +E  P  +  E    
Sbjct: 63  AERIRSEYVVEITGTVTKRDDETINPKIKTGQVEVQAKSIEIINQSETPPFSINEENLNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR+ L +    R +I  S+R  +  + F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRREKLAQTFKMRHQITRSIRQFLDGDGFYDVETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQIDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D++   E +++ V  +          F R+ Y +A+ RYGTDKPD R  + + 
Sbjct: 242 MSFVEQEDVMQLGEAMVKNVLADVKGIEMTDA-FPRMTYTEAMSRYGTDKPDTRFGMELL 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E     +F+VF   +      +   +        R   D + E+    G  GLA++ 
Sbjct: 301 DVSELGQIMDFKVFKGAVESGGQVKALVVENAAADYTRKDIDGLTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+A+     +   ++     + GD   F+A             RN +
Sbjct: 361 VVED-----GLNGPIARFFEDAHVTKLQALTGAKAGDLVLFVADSKDVVAQSLGALRNKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +E G+I+   + F W+ D+P  E++EE ++    H+PFT P+     L        +A 
Sbjct: 416 GKERGLIDPEQYNFLWVTDWPLLEYDEEARRYVAGHHPFTSPKVEDIDLLETAPEQAQAQ 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NGFE+  G IR H  E+  + F  +G S E  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDLVLNGFELGGGSIRIHDGELQQRMFKALGFSDEAAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR VM+L G  N+R+   FP + +  DL+  +PS VS  QL EL LRI 
Sbjct: 536 LGLDRFVMILSGRTNLRDTIAFPKTASATDLMTDAPSPVSERQLDELSLRIK 587


>gi|323693062|ref|ZP_08107281.1| aspartyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
 gi|323502816|gb|EGB18659.1| aspartyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
          Length = 598

 Score =  631 bits (1627), Expect = e-178,   Method: Composition-based stats.
 Identities = 224/597 (37%), Positives = 345/597 (57%), Gaps = 11/597 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
            R+H C +L  +++G  V + GWV + R  GGIIF+D+RD  GI Q++          F 
Sbjct: 9   KRSHRCTELSTANIGETVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEESDCGAGSFA 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ + G V +RS   +N N+ TG+IE+ A  + +L+ AE  P P+      
Sbjct: 69  KAERLRSEFVVAVTGKVEARSG-AVNGNLKTGEIEIRANSLRVLAEAETPPFPIEENSRT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  L +N++ R+R+    R  +  E F+E  TP L  S+PEGARD+
Sbjct: 128 KEELRLKYRYLDLRRPDLQRNLMIRSRVAILTRKFLAEEGFLEIETPTLIKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ  KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGEFYALPQSPQLLKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ +D+L+  E +L+ +F+E  + + +     R+ + +A+ R+G+DKPDLR  + + 
Sbjct: 247 LSFVDVEDVLDVNERLLKTLFKEICDYD-LQLPIQRMTWREAMERFGSDKPDLRFGMELK 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV++     +F VF   L             +G    R   D + E+A+  G  GLAY+ 
Sbjct: 306 NVSDTVKDCQFVVFKGALENGGSVRGINAEGQG-AMPRKKIDALVEYAKGFGAKGLAYLA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D     +     AK +     EA+   +D + GD   F A           + R  +
Sbjct: 365 IQEDG----SYKSSFAKFMTEEELEALVRAMDGKPGDLLLFAADKDKVVFDVLGNLRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L ++  + F F W+ +FP +E++EE+ +    H+PFTMP      L   D  +++A 
Sbjct: 421 ARQLDLLKKDDFRFLWVTEFPLFEYSEEDGRYVAVHHPFTMPMEEDLPLIDTDPGAVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H ++V  +    +G + E    +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTEMGGGSVRIHQADVQSKMLEVLGFTAERANEQFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G DR+VML++GA ++R+V  FP  ++   L+M +P+ V  +QL EL + +    +K
Sbjct: 541 YGFDRMVMLMVGADSIRDVIAFPKVKDASCLMMEAPAAVDEKQLEELSIAVAVAAEK 597


>gi|158520687|ref|YP_001528557.1| aspartyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|226736534|sp|A8ZUR7|SYD_DESOH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|158509513|gb|ABW66480.1| aspartyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 597

 Score =  631 bits (1627), Expect = e-178,   Method: Composition-based stats.
 Identities = 238/599 (39%), Positives = 344/599 (57%), Gaps = 12/599 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CF 59
           +  RTH+C +L  +  G+ V L+GWV R R HGG+IF+D+RD  GITQVV NPD      
Sbjct: 7   NMRRTHTCNELSAASAGTEVVLAGWVQRRRDHGGVIFVDLRDREGITQVVFNPDREPAVH 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A  +R+E+V+C+ G V  R  + +N  + TG+IE++A ++ IL+ A+  P  V    +
Sbjct: 67  AKAHDIRNEYVICVKGKVEKRPDDMVNPKLTTGEIEVAASELAILNTAKTPPFMVEDRID 126

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             ESIR K+RF+DLRR  + KN++ R R   + R  + ++ F++  TP LT ++PEGARD
Sbjct: 127 VSESIRLKHRFVDLRRPAMQKNLLARHRAGMAAREFLNSQGFLDIETPFLTRNTPEGARD 186

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN G+FYALPQ+PQ +KQ+LM +GFDRY+QI  CFRDED R+DR P EF Q+D+
Sbjct: 187 YLVPSRVNPGAFYALPQSPQLFKQMLMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQIDL 245

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV ++D++   E ++  V  + +    V   F R+ YD A+  YG DKPDLR  + +
Sbjct: 246 EMSFVGEEDVMAIGEGLVANVVRQVTG-EAVDLPFSRMTYDQAMADYGLDKPDLRFDMKL 304

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAY 358
            ++T+      F+VFS  +      +  A+ AKG     R   D   E+       GLA+
Sbjct: 305 VDITDIAAGCGFQVFSGAVKNGGIVK--ALNAKGCADFTRKELDDYTEFVAIYKARGLAW 362

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  R D         P+AK        ++  RL+M  GD  FF A           + RN
Sbjct: 363 VKVRED-----GWQSPIAKFFTDDEKASMAQRLNMAVGDLVFFGADAASVVNDSLGNLRN 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I + LG+++ N   F W+ DFPF+E++E EK+    H+PFT P          D  +++
Sbjct: 418 RIGERLGLVDKNRMCFLWVTDFPFFEYDETEKRYQAKHHPFTAPHEADMEHLHTDPEAVR 477

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG EI  G IR H  +V  + F  +G++ E    +FG L  A   G PPHGG
Sbjct: 478 SRAYDLVLNGTEIGGGSIRIHNRQVQEKMFEALGLAPEDYTAKFGFLLDALDSGAPPHGG 537

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G DR+VMLL G  ++REV  FP +Q     L  +PS    +QL EL +++  +  K
Sbjct: 538 MAFGFDRLVMLLCGESSIREVIAFPKTQKAACALTDAPSPADKKQLDELFIKVTADINK 596


>gi|121635393|ref|YP_975638.1| aspartyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|166225367|sp|A1KVG2|SYD_NEIMF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|120867099|emb|CAM10865.1| aspartyl-tRNA synthetase [Neisseria meningitidis FAM18]
          Length = 602

 Score =  630 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 232/607 (38%), Positives = 353/607 (58%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   ++GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAENGDIIFFGADKAKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AAETKEA 602


>gi|260598340|ref|YP_003210911.1| aspartyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260217517|emb|CBA31699.1| Aspartyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 592

 Score =  630 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 223/597 (37%), Positives = 330/597 (55%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F +A 
Sbjct: 2   RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADAFSLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  + +N ++ TG++E+ A ++ I++ AE   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARDEKNVNRDMATGEVEVFATELTIINRAEP--LPLDSNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLIRQLWLDVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKNVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLDGINSPVAKFLNAEIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + +   +   W++DFP +E ++ E  +   H+PFT P+               A  YD
Sbjct: 417 LSLTDDAKWAPLWVIDFPMFE-DDGEVGLSAMHHPFTAPKDMSADELKAAPEEAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRGEMQQTVFGILGINEQEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG+ +V+      K
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFGNPTALAELGIEVVKKASPENK 592


>gi|330683918|gb|EGG95686.1| aspartate--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 588

 Score =  630 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 232/592 (39%), Positives = 336/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD       I
Sbjct: 3   KRTTYCGLVTEDLLNEKVTLKGWVHNRRDLGGLIFIDLRDREGIVQIVFNPDFSQEALNI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+++ + G+V  R AET+N  I TGQ+E+    IEI++ +E             
Sbjct: 63  AETVRSEYIVEVQGVVTKRDAETVNPKIKTGQVEVQVSNIEIINKSETPPFSINEENTNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDDNGFYDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +LR V ++    + V   F R+ Y +A+ RYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVMAMGEEMLRKVVKDVKGID-VPGPFPRMTYAEAMSRYGSDKPDTRFDMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV++     +F+VF   +  N   +            R   D + E+    G  GLA++ 
Sbjct: 301 NVSQLGHEMDFKVFKDTVENNGEIKAIVAKGAADQYTRKDMDALTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                  +    GP+A+     + E ++   +   GD   F+A  P          R  +
Sbjct: 361 VT-----DEGLTGPIARFFEDKDAEQLKSLTEASAGDLVMFVADKPEVVAQSLGALRIKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+ +   F W+ D+P  E+++E K+   AH+PFT P+        ++  + +A 
Sbjct: 416 AKELGLIDESKLNFLWVTDWPLLEYDDESKRYVAAHHPFTSPKKEDIDKLDSEPENAQAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRMHNGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSEKQLEELSLRIR 587


>gi|261391979|emb|CAX49443.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase; AspRS) [Neisseria
           meningitidis 8013]
          Length = 602

 Score =  630 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 232/607 (38%), Positives = 351/607 (57%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +     F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVD--LGGFPRMPYAEAMFYYGSDKPDMRIGLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKTKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 VAETKEA 602


>gi|241760783|ref|ZP_04758874.1| aspartate--tRNA ligase [Neisseria flavescens SK114]
 gi|241318680|gb|EER55232.1| aspartate--tRNA ligase [Neisseria flavescens SK114]
          Length = 602

 Score =  630 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 229/605 (37%), Positives = 344/605 (56%), Gaps = 12/605 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFATAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +     F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFQDALGVD--LGVFPRMPYAEAMFYYGSDKPDIRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYIKVND 357

Query: 364 DES----GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +     +     P+ K L+    + I  R   Q+GD  FF A             R  
Sbjct: 358 VSNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGADKAKVVNEAIGALRIK 417

Query: 420 IAQELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           +  E G  N    + ++  W++DFP +E++E+  +    H+PFT P+ G E L  +D  +
Sbjct: 418 VGLEHGAENGYFVDEWKPLWVVDFPMFEYDEDGDRWAAMHHPFTSPKPGHEDLMASDPEN 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G PPH
Sbjct: 478 CLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+ +   
Sbjct: 538 GGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDEKQLRELSLRLRQKAV 597

Query: 597 KILKI 601
           +  + 
Sbjct: 598 ETKEA 602


>gi|188996098|ref|YP_001930349.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|229559940|sp|B2V713|SYD_SULSY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|188931165|gb|ACD65795.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 602

 Score =  630 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 235/604 (38%), Positives = 360/604 (59%), Gaps = 17/604 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
              R + CGDL  S++G  VRL GWV  VR HGG+IF+++RD  GI QVV +P     E+
Sbjct: 7   EFKRDYYCGDLNESNIGDEVRLLGWVDTVRDHGGVIFINLRDREGIVQVVFDPSKIGEEL 66

Query: 62  ---AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
              AK ++SE+V+ + G V  R A T N  + TG IE++ +++ IL+ ++ LP P+    
Sbjct: 67  YNKAKKLKSEYVIGVRGRVYRRPAGTENPKMKTGNIEVAGEELLILNTSKALPFPIEDNI 126

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E +R KYR+LDLRR ++ +NI+ R  +  ++R  +    FIE  TP+LT S+PEGAR
Sbjct: 127 KVSEEVRLKYRYLDLRRPSMQRNIILRHEVYQAVREFLAGNGFIEVETPMLTKSTPEGAR 186

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR+ +G FYALPQ+PQ +KQ+LM +G +RYFQIA CFRDED R+DR P EF Q+D
Sbjct: 187 DFLVPSRLEKGKFYALPQSPQLFKQILMVAGLERYFQIAKCFRDEDLRADRQP-EFTQID 245

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV +DD++   E++++ V+++    +     F R+ Y++AI +YGTDKPDLR  + 
Sbjct: 246 LEMSFVTEDDVMTLAESLIQYVYKKVLGIDI-KIPFRRMSYEEAINKYGTDKPDLRYGLE 304

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + ++T+     EF+VF+ +       +   I   G   +R   D + E+A+  G  G+A+
Sbjct: 305 LIDITDLAKEVEFKVFNDVAKSGGLVKGINIK-GGSKFSRKEIDELTEYAKKFGAKGMAW 363

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E+       P+ K       + +   +D +DGD   FIA             R 
Sbjct: 364 VKLENGEA-----TSPILKFFTEEQKQKLFSLMDAKDGDLLIFIADKKDITHKVLGFLRK 418

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL---- 474
           HIA+++ +I+ +  EF W++DFP +EW+EEE ++   H+PFT P+          L    
Sbjct: 419 HIAEKMNLIDNSKLEFLWVVDFPLFEWDEEENRLVAIHHPFTSPKDEDIDRLDEALNSPE 478

Query: 475 --LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
             LS K+  YD+V NG EI  G IR H   +  + F  + IS+E  + +FG L  A   G
Sbjct: 479 IALSFKSKAYDMVLNGEEIGGGSIRIHTPYIQEKVFQLLNISEEEAKEKFGFLIEALSYG 538

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG+A G+DRI+ L+ G++++R+V  FP +Q     L G+P  VS +QL+E+G+++ 
Sbjct: 539 APPHGGLAFGLDRILALMTGSESIRDVIAFPKTQKGICPLTGAPDYVSEKQLKEVGIKVE 598

Query: 593 ENPK 596
            + +
Sbjct: 599 VDEE 602


>gi|6573338|pdb|1C0A|A Chain A, Crystal Structure Of The E. Coli Aspartyl-Trna Synthetase
           : Trnaasp : Aspartyl-Adenylate Complex
          Length = 585

 Score =  630 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 221/590 (37%), Positives = 328/590 (55%), Gaps = 7/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    E I  R   QDGD  FF A +           R  + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEDILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVK 585


>gi|225076015|ref|ZP_03719214.1| hypothetical protein NEIFLAOT_01042 [Neisseria flavescens
           NRL30031/H210]
 gi|224952730|gb|EEG33939.1| hypothetical protein NEIFLAOT_01042 [Neisseria flavescens
           NRL30031/H210]
          Length = 602

 Score =  630 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 233/607 (38%), Positives = 352/607 (57%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYSEAMFYYGSDKPDMRIDLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGADKAKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNVVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AVETKEA 602


>gi|313202118|ref|YP_004040776.1| aspartyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312441434|gb|ADQ85540.1| aspartyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 586

 Score =  630 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 224/584 (38%), Positives = 352/584 (60%), Gaps = 5/584 (0%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVL 71
               +G  V L GW HR R HGG+IF+D+RD  G+ Q+V +PD+   F++A++VRSE+VL
Sbjct: 2   NREHIGQTVTLCGWAHRRRDHGGVIFIDLRDREGMAQIVIDPDTPEAFKLAETVRSEFVL 61

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            +   V +R   T+NANI TG++E+ A +IEIL+ +   P  +  +    E +R ++R++
Sbjct: 62  KVVCKVRARPEGTVNANIPTGEVEMLATEIEILNPSLTPPFMLDDDNLS-EMVRLEHRYI 120

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           DLRR  + KN++ R R+  ++R  + +  FIE  TP+LT S+PEGARD+LVPSRV+ G F
Sbjct: 121 DLRRPAMQKNMMLRYRVAKTLRDHLDSNGFIEVETPMLTRSTPEGARDYLVPSRVHHGQF 180

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           +ALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D+E SF+ +++I+N
Sbjct: 181 FALPQSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQP-EFTQVDIETSFLGEEEIMN 239

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +E+++R +F+   + + +   F R+ + +A+ +YG+DKPD+R  + +  +T+     +F
Sbjct: 240 IVEDMIRKMFKSVQDID-LPAQFPRMPFSEAMNKYGSDKPDMRVTLEITELTDIMKDVDF 298

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR-LDESGNVA 370
           +VF+   ++  G         G   +R+  D   E+ +  G  GLAYI    + +     
Sbjct: 299 KVFAGAANMVGGRVAAMRVPNGAAISRSEIDAYTEFVKIYGAKGLAYIKINDITKLNEEG 358

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
              P+ K++++   +AI  R   Q+GD  FF A             R  +  E G ++  
Sbjct: 359 LQSPIVKNIHVNALQAIIDRTGAQNGDIVFFGADKAKVVNEALGALRTKVGHEKGHVDGR 418

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
            +   W++DFP +E +EE  +    H+PFT P+ G E L   +  +  +  YD+V NG+E
Sbjct: 419 AWAPLWVVDFPMFEHDEEADRWVALHHPFTSPKDGHEDLLTTNPGAALSKAYDMVLNGWE 478

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           +  G +R H  EV  + F  + ISKE  + +FG L  A Q G PPHGG+A G+DR+V L+
Sbjct: 479 VGGGSVRIHKQEVQSKVFDALKISKEEAQEKFGFLLDALQYGAPPHGGLAFGLDRLVTLM 538

Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            GA+++R+V  FP +Q    L+  +P+ V  +QLREL +R+ + 
Sbjct: 539 AGAESIRDVIAFPKTQRAQCLMTNAPNEVDEKQLRELHIRVRQQ 582


>gi|15596160|ref|NP_249654.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|107100420|ref|ZP_01364338.1| hypothetical protein PaerPA_01001445 [Pseudomonas aeruginosa PACS2]
 gi|116048888|ref|YP_792311.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893066|ref|YP_002441935.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|254245246|ref|ZP_04938568.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|12230941|sp|Q51422|SYD_PSEAE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|122257995|sp|Q02IC5|SYD_PSEAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226736543|sp|B7UXW9|SYD_PSEA8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|9946870|gb|AAG04352.1|AE004530_5 aspartyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|115584109|gb|ABJ10124.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126198624|gb|EAZ62687.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|218773294|emb|CAW29106.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 591

 Score =  630 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 232/593 (39%), Positives = 332/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLD+RD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDVRDREGLAQVVFDPDRAETFAKAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R     N N+ +G IE+   ++E+L+ AE  P P+    +  E 
Sbjct: 63  RVRSEFVVKITGKVRLRPEGARNPNMASGSIEVLGYELEVLNQAETPPFPLDEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  +   +  R RI +S+R  +    F++  TPIL   +PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAAKLKLRARITSSIRRYLDDNGFLDVETPILGRPTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR   G F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTYPGHFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI+   E ++R +F+E  +       F  + +++A+RRYG+DKPDLR P+ + +V 
Sbjct: 242 LDESDIIGITEKMVRQLFKEVLDVEFDE--FPHMPFEEAMRRYGSDKPDLRIPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G              R+  D   ++    G  GLAYI    
Sbjct: 300 DQLKEVEFKVFSGPANDPKGRVAALRVPGAASMPRSQIDDYTKFVGIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +   N   I  R+   DGD  FF A      C      R  +  +
Sbjct: 360 RAKGVEGLQSPIVKFIPEANLNVILDRVGAVDGDIVFFGADKAKIVCDALGALRIKVGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++    +   W++DFP +E N++   +   H+PFT P+     L+ N   +  +  YD
Sbjct: 420 LKLLTRE-WAPMWVVDFPMFEENDD-GSLSALHHPFTSPKCTPAELEAN-PGAALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H   +    F  +GI +   E +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHDKSMQQAVFRVLGIDEAEQEEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA ++REV  FP +Q+  D++  +P +V  + LREL +R+ E PK
Sbjct: 537 DRLVMLMTGASSIREVIAFPKTQSAGDVMTQAPGSVDGKALRELHIRLREQPK 589


>gi|271500736|ref|YP_003333761.1| aspartyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270344291|gb|ACZ77056.1| aspartyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 596

 Score =  630 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 224/599 (37%), Positives = 331/599 (55%), Gaps = 7/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F +A 
Sbjct: 2   RTEYCGLLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQEAFNLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    IN ++ TG++E+ A  + I++ AE   LP+   +   E 
Sbjct: 62  ELRNEFCIQLTGVVRARPDTQINKDMATGEVEVLATALTIINRAEP--LPLDSNQNNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R RI + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRARITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++      +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLVRELWLGVKGVD--LGDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G   +R   D   ++    G  GLAYI    
Sbjct: 297 DLLKDVDFKVFSGPANDPKGRVAAIRVPGGAQLSRKQIDEYAKFIEIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN     A+  R    DGD  FF A             R  + ++
Sbjct: 357 KANGLEGIQSPVAKFLNDGILAALLERTAADDGDILFFGADSAKVVTDALGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I N N ++  W++DFP +E ++ E  +   H+PFT P+    S    +  +  A  YD
Sbjct: 417 LKITNENSWQPLWVIDFPMFE-DDGEGGLAAMHHPFTAPRDMSPSELKANPTAAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI ++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNGEMQQTVFRILGIDEQQQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V   K      
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPSALEELSIAVVGKGKAAQDAE 594


>gi|28897821|ref|NP_797426.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260361820|ref|ZP_05774837.1| aspartate--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260876981|ref|ZP_05889336.1| aspartate--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260898718|ref|ZP_05907214.1| aspartate--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260901355|ref|ZP_05909750.1| aspartate--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|31076997|sp|Q87QV2|SYD_VIBPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|28806034|dbj|BAC59310.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308089517|gb|EFO39212.1| aspartate--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308093916|gb|EFO43611.1| aspartate--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308109585|gb|EFO47125.1| aspartate--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308113340|gb|EFO50880.1| aspartate--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328473206|gb|EGF44054.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 592

 Score =  630 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 221/597 (37%), Positives = 331/597 (55%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPESQVNKDMATGEVEILAKGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    E ++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVTEKMVREMWQELLNVDLGE--FPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   E+    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L+      I  R   + GD   F A             R  + ++
Sbjct: 357 RAAGVEGIQSPVAKFLSEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+     +   W++DFP +E + +E  +   H+PFT P G        +     +  YD
Sbjct: 417 LGLTKEGTWAPLWVVDFPMFEED-DEGNLHAMHHPFTSPLGVTAEELKANPAVANSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI  E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQAAVFDILGIDAEEQQLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +     K  +
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSIANPAALEELAIAVTAAKAKDAE 592


>gi|146283147|ref|YP_001173300.1| aspartyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|145571352|gb|ABP80458.1| aspartyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 604

 Score =  630 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 232/593 (39%), Positives = 340/593 (57%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLD+RD  G+ QVV +PD    F  A 
Sbjct: 16  RSHYCGQLNESLDGQEITLCGWVHRRRDHGGVIFLDVRDREGLAQVVFDPDRAETFAAAD 75

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V  R A  +N NI +G IE+   ++E+L+ AE  P P+    +  E 
Sbjct: 76  RVRSEYVIKVTGKVRLRPAGAVNPNIASGAIEVLGYELEVLNDAETPPFPLNEYSDVGEE 135

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPIL   +PEGARD+LVP
Sbjct: 136 TRLRYRFIDLRRPEMAEKLKLRSRITASIRRYLDENGFLDVETPILGRPTPEGARDYLVP 195

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 196 SRTHAGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 254

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI+   E ++R +F+E  +       F  + +++A+RRYG+DKPDLR P+ + +V 
Sbjct: 255 LDEADIIGITEGMIRKLFKEVLDLEFGE--FPHMPFEEAMRRYGSDKPDLRIPLELVDVA 312

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G              R+  D   ++    G  GLAYI    
Sbjct: 313 DQLNAVEFKVFSGPANDPKGRVAALRVPGAASMPRSQIDDYTKFVGIYGAKGLAYIKVNE 372

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +   N   I  R+   DGD  FF A             R  +  +
Sbjct: 373 RAKGVEGLQSPIVKFIPEDNLNVILDRVGAVDGDIVFFGADKAKIVSEALGALRIKLGHD 432

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++ C+ +   W++DFP +E N++   +   H+PFT P+   + L+ N   +  +  YD
Sbjct: 433 LKLLTCD-WAPLWVVDFPMFEGNDD-GSLSALHHPFTAPKCTPQELEAN-PSAALSRAYD 489

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+    F  +GI +   E +FG L  A + G PPHGG+A G+
Sbjct: 490 MVLNGTELGGGSIRIHRKEMQQAVFRILGIDEAEQEEKFGFLLDALKFGAPPHGGLAFGL 549

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LR+L +R+ E PK
Sbjct: 550 DRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGAVDNKALRDLHIRLREQPK 602


>gi|83720369|ref|YP_441117.1| aspartyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167579867|ref|ZP_02372741.1| aspartyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
 gi|167617942|ref|ZP_02386573.1| aspartyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257140221|ref|ZP_05588483.1| aspartyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|97196581|sp|Q2T132|SYD_BURTA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|83654194|gb|ABC38257.1| aspartyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 600

 Score =  630 bits (1626), Expect = e-178,   Method: Composition-based stats.
 Identities = 228/597 (38%), Positives = 330/597 (55%), Gaps = 8/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQVKGLVRNRPEGTVNAGLKSGKIEVLCHELTVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KG    R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGAELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   QDGD  FF A             R  I   
Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIVFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N    + ++  W++DFP +E+++EE +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVESGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+ +  +
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|298369891|ref|ZP_06981207.1| aspartate--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281351|gb|EFI22840.1| aspartate--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 602

 Score =  630 bits (1625), Expect = e-178,   Method: Composition-based stats.
 Identities = 229/605 (37%), Positives = 345/605 (57%), Gaps = 12/605 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFATAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFQDALGVD--LGDFPRMPYAEAMFYYGSDKPDMRISLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYIKVND 357

Query: 364 DES----GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +     +     P+ K L+    + I  R   Q+GD  FF A             R  
Sbjct: 358 VSNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKAKVVNEAIGALRIK 417

Query: 420 IAQELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           +  E G  N    + ++  W++DFP +E++E+  +    H+PFT P+ G E L  +D  +
Sbjct: 418 VGLEHGAENSYFVDEWKPLWVVDFPMFEYDEDGDRWAAMHHPFTSPKPGHEDLMASDPEN 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G PPH
Sbjct: 478 CLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+ +   
Sbjct: 538 GGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELSLRLRQKAT 597

Query: 597 KILKI 601
           +  + 
Sbjct: 598 ENKEA 602


>gi|300717088|ref|YP_003741891.1| Aspartyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299062924|emb|CAX60044.1| Aspartyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 596

 Score =  630 bits (1625), Expect = e-178,   Method: Composition-based stats.
 Identities = 217/591 (36%), Positives = 330/591 (55%), Gaps = 7/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG + +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F++A 
Sbjct: 2   RTDYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQEAFKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  +  N+++ TG++E+ A  + I++ +E   LP+       E 
Sbjct: 62  ELRNEFCIQLTGTVRARDDKNKNSDMATGEVEIFATDLTIINRSEP--LPLDSNHANTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPDMAQRLKTRAKISSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++++    +    NF  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREIMEQLVRELWQDVKGVD--LGNFPMMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +             G    R   D   ++ +  G  GLA++    
Sbjct: 297 DLLKDVEFNVFSGPANDAKSRVAALRVPGGEKLTRKQIDEYTDFVKIYGAKGLAWMKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L     EAI  R +  DGDS FF A             R  + ++
Sbjct: 357 RAKGLEGVTSPVAKFLTADIVEAILARTNAADGDSIFFGADSAKVVADALGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I   N +   W++DFP +E +  E  +   H+PFT P+        +   +  A  YD
Sbjct: 417 LDITTGNAWAPLWVVDFPMFEED-GEGGLSAMHHPFTAPKDMTPEELKSIPETAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +++    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNTQMQQTVFGILGITEQEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR+VMLL G  N+R+V  FP +     L+  +P+  +   L ELG+ +++ 
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPNFANPASLSELGIEVMKK 586


>gi|220932051|ref|YP_002508959.1| Aspartyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254781736|sp|B8CXE5|SYD_HALOH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219993361|gb|ACL69964.1| Aspartyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 590

 Score =  630 bits (1625), Expect = e-178,   Method: Composition-based stats.
 Identities = 228/590 (38%), Positives = 347/590 (58%), Gaps = 11/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTH  G +    +G  V + GWV + R HGG+IF+D+RD  GI QVV NPD     F+ 
Sbjct: 9   KRTHYAGKISTQQIGKKVTVMGWVQKRRDHGGVIFIDLRDRSGIVQVVFNPDNNERAFKK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+V+ ++G V  R    IN +I TG+IE+   ++ IL  +E  P  +  +    
Sbjct: 69  ATELRSEYVIAVEGEVEKRPEGNINPDIPTGEIEIRGNRLRILDESETPPFEIDDDINVG 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  + KN+  R R++ + R  +    F E  TPILT S+PEGARD+L
Sbjct: 129 EDLRLKYRYLDLRRPRMKKNLELRHRVMKTTRDYLDDNGFWEVETPILTRSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ G FYALPQ+PQ +KQLLM  G +RYFQIA CFRDED R++R P EF Q+D+EM
Sbjct: 189 VPSRIHPGHFYALPQSPQLFKQLLMVGGVERYFQIARCFRDEDLRANRQP-EFTQIDIEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++++D+ + +  +++ +F        +      + Y +AI R+G+DKPDLR  + + +
Sbjct: 248 SFIDKEDVFSLVNGLMKRLFALV--DIEIPEKIPVMPYQEAIDRFGSDKPDLRFGMELKD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V++    SEFRVFS ++      +       G    R+  D   ++ +  G  GLA+I  
Sbjct: 306 VSDVVKDSEFRVFSGVVKDGGQVKGINFK-GGAISPRSKIDGYTDYVKIFGAKGLAWIAL 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + +         P+AK L+    E I+ ++  Q GD   F+A  P        + R  IA
Sbjct: 365 KEN-----GLKSPIAKFLSEKELEGIKEKMGAQTGDLLLFVADKPSIVADALGNLRLKIA 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +E G+I    ++F W++DFP  E++E+E +    H+PFT P      L  ++   I++  
Sbjct: 420 REEGLIPDGVYKFVWVVDFPLMEYDEDEGRYVAKHHPFTAPLDEDIPLLDSNPEKIRSKA 479

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD V NG E+  G IR +  ++ ++ F+ + IS+E   ++FG L  AF  G PPHGGIA 
Sbjct: 480 YDFVLNGEELGGGSIRINNKDLQMKVFNALNISEEKASDKFGFLLEAFNYGAPPHGGIAF 539

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++M+L G++++R+V  FP +Q     L  +PSTV+ +QLREL ++I
Sbjct: 540 GLDRLLMVLSGSESMRDVIAFPKTQKASSPLTEAPSTVAEKQLRELHIKI 589


>gi|167901359|ref|ZP_02488564.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 600

 Score =  630 bits (1625), Expect = e-178,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 329/597 (55%), Gaps = 8/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+        +  F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIGVELDAT-FPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   QDGD  FF A             R  I   
Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E+++EE +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVEAGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+ +  +
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|296315098|ref|ZP_06865039.1| aspartate--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296838009|gb|EFH21947.1| aspartate--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 602

 Score =  630 bits (1625), Expect = e-178,   Method: Composition-based stats.
 Identities = 233/607 (38%), Positives = 353/607 (58%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPAMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKTKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 VAETKEA 602


>gi|194099292|ref|YP_002002386.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|238693212|sp|B4RPA1|SYD_NEIG2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|193934582|gb|ACF30406.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
          Length = 602

 Score =  630 bits (1625), Expect = e-178,   Method: Composition-based stats.
 Identities = 234/607 (38%), Positives = 355/607 (58%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +G  V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLGITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +++GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGADKAKVVNEAVGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQGKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AVETKEA 602


>gi|304386757|ref|ZP_07369025.1| aspartate--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304339157|gb|EFM05243.1| aspartate--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 602

 Score =  630 bits (1625), Expect = e-178,   Method: Composition-based stats.
 Identities = 232/607 (38%), Positives = 352/607 (57%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVD--LGDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKTKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AAETKEA 602


>gi|284050133|ref|ZP_06380343.1| aspartyl-tRNA synthetase [Arthrospira platensis str. Paraca]
 gi|291569798|dbj|BAI92070.1| aspartyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 597

 Score =  630 bits (1625), Expect = e-178,   Method: Composition-based stats.
 Identities = 247/602 (41%), Positives = 351/602 (58%), Gaps = 17/602 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+ CG L   ++G  V L GWV R R HGG++FLD+RD  G+ Q++++P+     + ++
Sbjct: 2   RTYYCGHLRSVNIGETVTLCGWVDRYRDHGGVVFLDLRDRSGLVQIISDPERTPNSYGLS 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
            SVR+E+VL I G V  R  E+IN  I  G IE+ A +IE+L+         +       
Sbjct: 62  TSVRNEYVLRITGRVSHRPDESINPKIPGGDIEVYADEIEVLNGLGKPLPFQVGSNDNES 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRR+ + +N+  R  +I +MR  +   E+FIE  TPILT S+PEGAR
Sbjct: 122 VREELRLKYRYLDLRRERMTRNLQLRHEVIKAMRRFLEDQEHFIEVETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G ++ALPQ+PQ +KQ+LM SGFDRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGEWFALPQSPQLFKQMLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ Q++IL   EN++  +F+     + +   F R+ Y DA+ RYG+DKPD R  + 
Sbjct: 241 MEMSFMSQEEILTLNENLVCHIFKTVKGID-LPRPFPRMTYKDAMERYGSDKPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V++    S F+VFS  +      ++  IP      +         + + A   G  G
Sbjct: 300 LADVSDLLKDSGFKVFSAAIKSGGIVKILPIPGGNDLISNVQIKPGGDLFKEATEAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI  R+   G +  +G +  +L+      I  R + + GD   F AGD          
Sbjct: 360 LAYI--RVKADGQIDTIGAIKDNLSDEQKAEILRRTNAKAGDLLLFGAGDVATVNKTLDR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  I Q LG+I+       W+ DFP +EWN++EK+++  H+PFT P         NDL 
Sbjct: 418 LRLVIGQRLGLIDPEQINLLWVTDFPMFEWNQDEKRLEAIHHPFTSPHPDDI----NDLK 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NG EI  G +R +  E+  + F  +G+S E   N+FG L  AF+ G PP
Sbjct: 474 TARAQAYDLVLNGTEIGGGSLRIYQREIQEKVFDAIGLSTEEAYNKFGFLLEAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL G  ++R+V  FP +Q    LL  +PS V  +QL+EL +     P
Sbjct: 534 HGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQARCLLTNAPSGVDQKQLKELQVASTYKP 593

Query: 596 KK 597
           KK
Sbjct: 594 KK 595


>gi|114321812|ref|YP_743495.1| aspartyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122310755|sp|Q0A582|SYD_ALHEH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|114228206|gb|ABI58005.1| aspartyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 592

 Score =  630 bits (1625), Expect = e-178,   Method: Composition-based stats.
 Identities = 222/592 (37%), Positives = 340/592 (57%), Gaps = 5/592 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG +  +D+   V L GW HR R HGG+IF+D+RD  G+ QVV +PD    F +A+
Sbjct: 2   RTHYCGHVSETDLDQEVTLCGWAHRRRDHGGVIFIDLRDREGLVQVVFDPDRPETFALAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL + G V  R A T N ++ TGQ+E+   ++++L+ A+  P  +    +  E 
Sbjct: 62  RVRSEFVLKVRGRVRRRPAGTENPDLPTGQVEVLGLELDLLNPAKTPPFQLDEHEQAGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR++DLRR  + + +  R RI +++R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 122 VRLRYRYVDLRRPEMLQRLRARARITSNLRRFLDEHGFLDIETPMLTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +G DRY+QI  CFRDED R+DR P EF QLD+E SF
Sbjct: 182 SRTHPGSFFALPQSPQLFKQLLMMAGMDRYYQIVRCFRDEDLRADRQP-EFTQLDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ I++  E ++R +F +    + + + F R+ Y +A+ R+G+DKPDLR P+ +  V 
Sbjct: 241 MDEEGIMHLTERMMRRLFADVLQVD-LPDPFPRMGYAEAMARFGSDKPDLRIPLELVEVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF+   +   G         G G  R   D   ++    G  GLAYI    
Sbjct: 300 DLMGGVEFKVFAGPAADPRGRVAALHVPGGAGLTRKQIDDYTQFVGRYGAKGLAYIKVND 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K L     + I  R + + GD  FF A             R  +  +
Sbjct: 360 PAQGREGLQSPILKFLTDEAVDGILRRTEARAGDLIFFGADKAKVVNDALGALRVKLGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQY 482
           L ++  + +   W++DFP +E++E++ ++   H+PFT P       L   D   + +  Y
Sbjct: 420 LAMV-EDEWRPLWVVDFPMFEYDEKDGRLYALHHPFTAPNVDDPAELADKDPEQLVSRAY 478

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R H  ++    F  +GI ++    +FG L  A + G PPHGGIA G
Sbjct: 479 DMVLNGTELGGGSVRIHRQDMQQAVFRLLGIDEDEARAKFGFLLDALEYGAPPHGGIAFG 538

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+VML+ GA ++REV  FP +Q    LL  +P+ V + QL+EL LRI + 
Sbjct: 539 LDRLVMLMTGASSIREVMAFPKTQTAACLLTDAPAEVDIAQLQELALRITKP 590


>gi|254670608|emb|CBA06571.1| Aspartyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 602

 Score =  630 bits (1625), Expect = e-178,   Method: Composition-based stats.
 Identities = 233/607 (38%), Positives = 352/607 (57%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +     F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGGFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKTKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AAETKEA 602


>gi|119476897|ref|ZP_01617178.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119449704|gb|EAW30941.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 590

 Score =  630 bits (1625), Expect = e-178,   Method: Composition-based stats.
 Identities = 233/593 (39%), Positives = 345/593 (58%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG +  + +   V L GWV R R HGG+IFLD+RD  GI QVV +PD    F+ A 
Sbjct: 2   RTHYCGTITSAQIDEEVTLYGWVDRRRDHGGVIFLDMRDREGIVQVVFDPDTEEHFQRAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL I G V +RS  TIN N++TG+IE+  +K+EIL+ A   P  +    E  E 
Sbjct: 62  RVRSEYVLEIKGRVRARSDATINPNMLTGEIEILGKKLEILNSAATPPFQLDQHIEVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR++DLRR  + + +  R+R+ +S+R  M    F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKYRYIDLRRPEMLEKLKLRSRVTSSIRRFMDENGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHEGKFFALPQSPQLFKQLLMVSGMDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    I+   E +++G+F+E  + +    +F  + Y +A+ R+G+DKPDLR P+ + +V 
Sbjct: 241 MNDQQIMAITERMIQGLFKEVLDVD--LGDFPHMPYAEAMSRFGSDKPDLRIPLELVDVD 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF+   +   G         G   +R   D   ++    G  GLA+I    
Sbjct: 299 DLMRQVDFKVFNGPANDAKGRVAALKVTGGAQISRKQIDGYTKFVSIYGAKGLAWIKIND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K +       +  RL + DGD  FF A             R  + ++
Sbjct: 359 ITAGIEGLQSPILKFMPEDIITQMMARLAVTDGDIVFFGADKTSIVNEALGALRVKVGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G+I  + +   W++DFP +E N E   +   H+PFT P    E+L+ N      +  YD
Sbjct: 419 QGLIKGD-WAPLWVVDFPMFEENSE-GNLTSLHHPFTAPACSPEALEKN-PEQALSIAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H +++    F  +GIS E  + +FG L  A + G PPHGG+A G+
Sbjct: 476 MVLNGTELGGGSVRIHQADMQQAVFRVLGISDEEAQEKFGFLLDALKYGAPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GAK++R+V  FP +Q+   ++  +P     +QLREL +R+ E PK
Sbjct: 536 DRLVMLMTGAKSIRDVIAFPKTQSAACVMTDAPGLADNKQLRELNIRLREKPK 588


>gi|313105850|ref|ZP_07792113.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|310878615|gb|EFQ37209.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 591

 Score =  630 bits (1625), Expect = e-178,   Method: Composition-based stats.
 Identities = 232/593 (39%), Positives = 332/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLD+RD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDVRDREGLAQVVFDPDRAETFAKAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R     N N+ +G IE+   ++E+L+ AE  P P+    +  E 
Sbjct: 63  WVRSEFVVKITGKVRLRPEGARNPNMASGSIEVLGYELEVLNQAETPPFPLDEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  +   +  R RI +S+R  +    F++  TPIL   +PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAAKLKLRARITSSIRRYLDDNGFLDVETPILGRPTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR   G F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTYPGHFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI+   E ++R +F+E  +       F  + +++A+RRYG+DKPDLR P+ + +V 
Sbjct: 242 LDESDIIGITEKMVRQLFKEVLDVEFDE--FPHMPFEEAMRRYGSDKPDLRIPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G              R+  D   ++    G  GLAYI    
Sbjct: 300 DQLKEVEFKVFSGPANDPKGRVAALRVPGAASMPRSQIDDYTKFVGIYGAKGLAYIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +   N   I  R+   DGD  FF A      C      R  +  +
Sbjct: 360 RAKGVEGLQSPIVKFIPEANLNVILNRVGAVDGDIVFFGADKAKIVCDALGALRIKVGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++    +   W++DFP +E N++   +   H+PFT P+     L+ N   +  +  YD
Sbjct: 420 LKLLTRE-WAPMWVVDFPMFEENDD-GSLSALHHPFTSPKCTPAELEAN-PGAALSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H   +    F  +GI +   E +FG L  A + G PPHGG+A G+
Sbjct: 477 MVLNGTELGGGSIRIHDKSMQQAVFRVLGIDEAEQEEKFGFLLDALKYGAPPHGGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA ++REV  FP +Q+  D++  +P +V  + LREL +R+ E PK
Sbjct: 537 DRLVMLMTGASSIREVIAFPKTQSAGDVMTQAPGSVDGKALRELHIRLREQPK 589


>gi|91786768|ref|YP_547720.1| aspartyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|91695993|gb|ABE42822.1| aspartyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 601

 Score =  630 bits (1625), Expect = e-178,   Method: Composition-based stats.
 Identities = 219/600 (36%), Positives = 340/600 (56%), Gaps = 11/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACF 59
           + + R++ CG +  S +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD    F
Sbjct: 4   VSQMRSNYCGLVTESLMGQTVSLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRADMF 63

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A+ VR+E+ + + G+V +R   T+N ++ +G+IE+   ++ +L+ +   P  +  +  
Sbjct: 64  KTAEGVRNEFCVQVKGVVRARPEGTVNDHLKSGKIEVLCHELTVLNPSVTPPFQLDDDNL 123

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+ R  +R LDLRR  + KN++ R R+    R  +    FI+  TP+LT S+PEGARD
Sbjct: 124 S-ETTRLTHRVLDLRRPYMQKNLMLRYRVAMETRKFLDTHGFIDIETPMLTKSTPEGARD 182

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+
Sbjct: 183 YLVPSRVNEGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDI 241

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + DI +  + ++  +F+   + +     F  + Y+DA+ RYG+DKPDLR  +  
Sbjct: 242 ETSFMAEQDIRDMFQGMISNIFKTVLDTDLGE--FPVMAYNDAMHRYGSDKPDLRVNLEF 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +T+     +F+VFS   +   G  V      G   +R   D   E+ +  G  GLA+I
Sbjct: 300 TELTDVMADVDFKVFSTPATTKGGRVVALRVPGGSEMSRGEIDGYTEFVKIYGAKGLAWI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G      P+ K+L+      I  R   ++GD  FF A             R  
Sbjct: 360 KVNDAGKGREGLQSPIVKNLHDAAIAEILKRTGARNGDLIFFGADKEKVVNDSIGALRLK 419

Query: 420 IA-----QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           +      ++ G+     ++  W++DFP +E++EE ++    H+PFT P+ G E     D 
Sbjct: 420 VGHSEFGKKTGLFTAG-WKPLWVVDFPMFEFDEEGQRWSAVHHPFTAPKDGHEDWMDTDP 478

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               +  YD+V NG+E+  G +R H ++V  + F+ + I  E  + +FG L  A Q G P
Sbjct: 479 GRCISKAYDMVLNGWELGGGSVRIHRADVQNKVFNALKIGPEEAQQKFGFLLDALQYGAP 538

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+   
Sbjct: 539 PHGGLAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTHAPSPVDEKQLRELHIRLRNP 598


>gi|53718287|ref|YP_107273.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|76811224|ref|YP_332265.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|62287537|sp|Q62MP0|SYD_BURMA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62287539|sp|Q63X93|SYD_BURPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|97196569|sp|Q3JVY8|SYD_BURP1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|52208701|emb|CAH34637.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|76580677|gb|ABA50152.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
          Length = 598

 Score =  630 bits (1625), Expect = e-178,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 329/597 (55%), Gaps = 8/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 2   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 62  GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQLDDDNLS-ET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 181 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+        +  F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 240 LGEQEIRDLFEDMIRHIFKTTIGVELDAT-FPVMPYSEAMARFGSDKPDLRVKLEFTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 299 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   QDGD  FF A             R  I   
Sbjct: 359 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 418

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E+++EE +   AH+PFT P+         D     A
Sbjct: 419 EFGKANGLVEAGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLA 478

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 479 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGGI 538

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+ +  +
Sbjct: 539 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQ 595


>gi|218768770|ref|YP_002343282.1| aspartyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|24212422|sp|Q9JT23|SYD_NEIMA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|121052778|emb|CAM09124.1| aspartyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|319411010|emb|CBY91408.1| aspartyl-tRNA synthetase (aspartate-tRNA ligase; AspRS) [Neisseria
           meningitidis WUE 2594]
          Length = 602

 Score =  630 bits (1625), Expect = e-178,   Method: Composition-based stats.
 Identities = 232/607 (38%), Positives = 352/607 (57%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVD--LGDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGADKTKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AAETKEA 602


>gi|53724995|ref|YP_102028.1| aspartyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121599730|ref|YP_994048.1| aspartyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124386059|ref|YP_001028288.1| aspartyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126450153|ref|YP_001081932.1| aspartyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126452649|ref|YP_001064973.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|167001912|ref|ZP_02267702.1| aspartate--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167718148|ref|ZP_02401384.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167737177|ref|ZP_02409951.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 14]
 gi|167814310|ref|ZP_02445990.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167822786|ref|ZP_02454257.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|167844361|ref|ZP_02469869.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167892873|ref|ZP_02480275.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167909589|ref|ZP_02496680.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|167917603|ref|ZP_02504694.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|226196745|ref|ZP_03792325.1| aspartate--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237810878|ref|YP_002895329.1| aspartate--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|238561941|ref|ZP_00441255.2| aspartate--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242314366|ref|ZP_04813382.1| aspartate--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254177015|ref|ZP_04883672.1| aspartyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254196309|ref|ZP_04902733.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254203714|ref|ZP_04910074.1| aspartyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254208689|ref|ZP_04915037.1| aspartyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254261739|ref|ZP_04952793.1| aspartate--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254360255|ref|ZP_04976525.1| aspartyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|166225326|sp|A3MNU6|SYD_BURM7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225327|sp|A2S8L9|SYD_BURM9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225328|sp|A1V745|SYD_BURMS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225329|sp|A3NRK2|SYD_BURP0 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|52428418|gb|AAU49011.1| aspartyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121228540|gb|ABM51058.1| aspartyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124294079|gb|ABN03348.1| aspartate--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126226291|gb|ABN89831.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126243023|gb|ABO06116.1| aspartate--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147745226|gb|EDK52306.1| aspartyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147750565|gb|EDK57634.1| aspartyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148029495|gb|EDK87400.1| aspartyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160698056|gb|EDP88026.1| aspartyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|169653052|gb|EDS85745.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|225931276|gb|EEH27283.1| aspartate--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237503764|gb|ACQ96082.1| aspartate--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|238523664|gb|EEP87101.1| aspartate--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242137605|gb|EES24007.1| aspartate--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243062321|gb|EES44507.1| aspartate--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254220428|gb|EET09812.1| aspartate--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 600

 Score =  630 bits (1625), Expect = e-178,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 329/597 (55%), Gaps = 8/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+        +  F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIGVELDAT-FPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   QDGD  FF A             R  I   
Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E+++EE +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVEAGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+ +  +
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|307545148|ref|YP_003897627.1| aspartyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307217172|emb|CBV42442.1| aspartyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 593

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 233/593 (39%), Positives = 342/593 (57%), Gaps = 8/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  + V   V L GWVHR R HGG+IFLD+RD  GI QVV +PD+   F  A 
Sbjct: 2   RSHYCGQLNETMVDQTVTLCGWVHRRRDHGGVIFLDMRDRDGIAQVVVDPDTAEAFANAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             R+E+VL I G +  R   T N N+ TG IE+ A+ +E+L+ A   P  +    +  E 
Sbjct: 62  RARNEYVLRIVGRIRLRPEGTQNPNMPTGMIEVLAKDVEVLNTAATPPFQLDEHGKVGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR K+R++DLRR  +   +  R+RI +++R  +  + F++  TPILT ++PEGARD+LVP
Sbjct: 122 IRLKHRYIDLRRPEMIDKLRLRSRISHTVRAYLENQGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHAGSFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIEASF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+DDI+   E ++R +F+E  +       F R+ Y +A++R+G+DKPDLR P+ + +V 
Sbjct: 241 VEEDDIMAITEGMIRQLFQEVLDVELPE--FPRMPYAEAMQRFGSDKPDLRIPLELVDVD 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   + + G         G   +R   D    +    G  GLA+I    
Sbjct: 299 DLMKDVDFKVFSGPANADDGRVAALKVKGGASLSRKEIDDYTNFVGIYGARGLAWIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             SG      P+ K +     E +  R+  +DGD  FF A             R  + ++
Sbjct: 359 RASGIEGLQSPIVKFM-DGVIEPLLDRVGAEDGDIIFFGADKARIVNEALGALRVRLGED 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     +   W++DFP +E + +  ++   H+PFT P   +E+LK        +  YD
Sbjct: 418 LDLYTAE-WSPLWVVDFPMFEED-DNGRLQALHHPFTAPSCDVETLKQR-PAEALSRAYD 474

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H   +     +++GI +E    +FG L  A Q G PPHGG+A G+
Sbjct: 475 MVLNGTELGGGSIRIHDQTMQQAVLASLGIGEEEAREKFGFLLDALQYGAPPHGGLAFGL 534

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+ +REV  FP +Q+   L+  +P  VS +QL+EL +R+ +  K
Sbjct: 535 DRLVMLMGGARTIREVIAFPKTQSAACLMTDAPGEVSGQQLKELNIRLRQKAK 587


>gi|261366005|ref|ZP_05978888.1| aspartate--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288565412|gb|EFC86972.1| aspartate--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 602

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 229/605 (37%), Positives = 344/605 (56%), Gaps = 12/605 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFATAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFQDALGVD--LGDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYIKVND 357

Query: 364 DES----GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +     +     P+ K L+    + I  R   Q+GD  FF A             R  
Sbjct: 358 VSNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKAKVVNEAIGALRIK 417

Query: 420 IAQELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           +  E G  N    + ++  W++DFP +E++E+  +    H+PFT P+ G E L   D  +
Sbjct: 418 VGLEHGAENGYFVDEWKPLWVVDFPMFEYDEDGDRWAAMHHPFTSPKPGHEDLMATDPEN 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G PPH
Sbjct: 478 CLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+ +   
Sbjct: 538 GGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELSLRLRQKAT 597

Query: 597 KILKI 601
           +  + 
Sbjct: 598 ENKEA 602


>gi|254181771|ref|ZP_04888368.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|184212309|gb|EDU09352.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1655]
          Length = 600

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 230/597 (38%), Positives = 329/597 (55%), Gaps = 8/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G++E+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRGRPEGTINAGLKSGRVEVLCHELNVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+        +  F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIGVELDAT-FPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSAPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   QDGD  FF A             R  I   
Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E+++EE +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVEAGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+ +  +
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|251789862|ref|YP_003004583.1| aspartyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247538483|gb|ACT07104.1| aspartyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 596

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 223/599 (37%), Positives = 329/599 (54%), Gaps = 7/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F++A 
Sbjct: 2   RTEYCGLLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    IN  + TG++E+ A  + I++ AE   LP+   +   E 
Sbjct: 62  ELRNEFCIQLTGVVRARPDNQINKEMATGEVEVLATALTIINRAEP--LPLDSNQNNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R RI + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRARITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLVRELWLDVKGVD--LGDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G   +R   D   ++    G  GLAYI    
Sbjct: 297 DLLKDVDFKVFSSPANDPKGRVAAIRVPGGAQLSRKQIDEYAKFIEIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN      +  R    DGD  FF A             R  + ++
Sbjct: 357 KAKGLEGIQSPVAKFLNDGILADLLARTAADDGDILFFGADSAKVVTDALGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I N N ++  W++DFP +E +  E  +   H+PFT P+    S    +  +  A  YD
Sbjct: 417 LKITNENSWQPLWVIDFPMFEED-GEGGLAAMHHPFTAPRDMSPSELKANPTAAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI ++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNGEMQQTVFRILGIDEQQQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V   K      
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPSALEELSIAVVGKGKAAQDAE 594


>gi|27365486|ref|NP_761014.1| aspartyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|320155869|ref|YP_004188248.1| aspartyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|29611878|sp|Q8DAN7|SYD_VIBVU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|27361634|gb|AAO10541.1| aspartyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|319931181|gb|ADV86045.1| aspartyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 592

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 216/597 (36%), Positives = 328/597 (54%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  + +A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYAVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R    +N  + TG++E+ A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRNEFCIKLTGEVRTRPESQVNKEMATGEVEILAKGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    E ++R ++ E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTSDQVRAVTEKMVREMWLELLNVDLGE--FPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLVKDVDFKVFSGPANDEKGRVAVIRVPGGAELTRKQIDEYTGFVNIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L+      I  R   + GD   F A             R  + ++
Sbjct: 357 RAAGMEGIQSPVAKFLSEDVINGILERTQAESGDIILFGADKANIVAEALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+     +   W++DFP +E + +E  +   H+PFT P G        +     +  YD
Sbjct: 417 LGLTKEGTWAPLWVVDFPMFEED-DEGNLHAMHHPFTSPLGLTAEELKANPAPAISNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQAAVFDILGIDADEQKLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +    +K  +
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSVANPAALEELAIAVTVAKEKSAE 592


>gi|37680472|ref|NP_935081.1| aspartyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|46577167|sp|Q7MJ74|SYD_VIBVY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|37199220|dbj|BAC95052.1| aspartyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 592

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 216/597 (36%), Positives = 328/597 (54%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  + +A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYAVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R    +N  + TG++E+ A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRNEFCIKLTGEVRTRPESQVNKEMATGEVEILAKGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    E ++R ++ E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTSDQVRAVTEKMVREMWLELLNVDLGE--FPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLVKDVDFKVFSGPANDEKGRVAVIRVPGGAELTRKQIDEYTGFVNIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L+      I  R   + GD   F A             R  + ++
Sbjct: 357 RAAGMEGIQSPVAKFLSEDVINGILERTQAESGDIILFGADKANIVAEALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+     +   W++DFP +E + +E  +   H+PFT P G        +     +  YD
Sbjct: 417 LGLTKEGTWAPLWVVDFPMFEED-DEGNLHAMHHPFTSPLGLTAEELKANPAPAVSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQAAVFDILGIDADEQKLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +    +K  +
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSVANPAALEELAIAVTVAKEKSAE 592


>gi|288958468|ref|YP_003448809.1| aspartyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288910776|dbj|BAI72265.1| aspartyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 608

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 305/612 (49%), Positives = 404/612 (66%), Gaps = 14/612 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG L   + G  VRLSGW++R R HG ++F+D+RDHYG+TQ V +  +  FE
Sbjct: 1   MHPYRTHTCGQLREENAGETVRLSGWMNRKRDHGQLLFIDLRDHYGLTQCVVDTSNPAFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  ++ E V+ + G V+ R+AETIN  + TG+IE+   ++ +   AE++PL V  + + 
Sbjct: 61  VANRLKLESVITVTGKVVKRTAETINDKLPTGRIEMQIAELAVEGEAEQIPLQVNQDTDA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YRFLDLRR+ +H+NI+ R+R+I S R RMI + F E  TPILTASSPEGARD+
Sbjct: 121 GEDVRLRYRFLDLRRERIHENIMLRSRVIASARRRMIDQGFTEFQTPILTASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR + G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 181 LVPSRNHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN------NFLRICYDDAIRRYGTDKPDLR 294
           MSFV Q+D+   +E VL G+F+EF      S        F RI Y +++ +YG DKPDLR
Sbjct: 241 MSFVTQEDVFAAIEPVLHGIFDEFGGFRRDSKPAIDGLPFRRISYAESMLKYGNDKPDLR 300

Query: 295 NPIIMHNVTEHFV--HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
           NP+++ +VTE F     EFR F + L           P K     R+F D++N+WAR  G
Sbjct: 301 NPLVITDVTEVFKRDDVEFRAFKQTLEKGGVVRAIRAP-KVSDRPRSFFDKLNDWARGLG 359

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
            PGL YI   + E+G   G GP+AK +      A+R    ++DGD+ FF+   P      
Sbjct: 360 APGLGYI---VMEAG--GGKGPIAKFVPEAAQAALRELAGLEDGDAIFFVCDQPGPAAKL 414

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
           A  AR  I +EL +I  N F FCWI+DFP YE +EE  K+ F+HNPF+MPQGG+++L+  
Sbjct: 415 AGFARTRIGEELDLIEKNAFRFCWIVDFPMYELDEETNKVIFSHNPFSMPQGGLKALETM 474

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           + L IKA+QYD+VCNG E++SG IRNH+ EVM +AF   G   E +E RFGG+  AF+ G
Sbjct: 475 NPLDIKAYQYDIVCNGVELSSGAIRNHLPEVMYKAFEIAGYPPEELEARFGGMLSAFKLG 534

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG A GIDRIVMLL    N+REV  FP++Q   DLLM +P+ V   +LREL L++ 
Sbjct: 535 APPHGGSAPGIDRIVMLLADEPNIREVIAFPLNQRAEDLLMQAPAPVDTARLRELHLKLD 594

Query: 593 ENPKKILKISVT 604
               K+   S  
Sbjct: 595 LPKPKVAAPSAP 606


>gi|212635158|ref|YP_002311683.1| aspartyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|226736544|sp|B8CNX7|SYD_SHEPW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|212556642|gb|ACJ29096.1| Aspartyl-tRNA synthetase [Shewanella piezotolerans WP3]
          Length = 593

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 220/594 (37%), Positives = 334/594 (56%), Gaps = 6/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  GI QVV +PD    FE+A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDMRDREGIVQVVYDPDLPEVFEVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE+ + I GLV +R    +NA++ TG+IE+   ++ +L+ +  LP+ +   +   E 
Sbjct: 62  SLRSEFCVQIKGLVRARPDSQVNADMRTGEIEILGLELTVLNSSAPLPINMDKNQHNTEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   IV R+++ +++R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMADRIVFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E + RG+F+E  + +     F R+ + +A+RRYG+DKPDLRNP+ + ++ 
Sbjct: 241 MTSEQVMAKTEEMTRGLFKELLDVDLGE--FPRMTFAEAMRRYGSDKPDLRNPLELIDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DLVKEVEFAVFNGPANDPEGRVAVLSIPGGAKLSRKQLDEYAKYVTIYGAKGLAWMKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G      PV K L     +A+  R   Q GD   F A             R    ++
Sbjct: 359 LDKGMEGIQSPVLKFLTEDVVKALLERTGAQTGDVILFGADKANVVAEAMGALRLKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++  + ++  W++DFP +E   +   +   H+PFT P     +    +  +  +  YD
Sbjct: 419 FDLLKGD-WKPLWVVDFPMFERTSD-GGLHAMHHPFTAPSNMTPAELEANPTAAISDAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H SE+    F  +GI+ E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVLNGCELGGGSVRIHNSEMQSAVFRILGINDEEANEKFGFLLEALRYGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DRI+ML+ GA ++R+V  FP +      L  +P   +  QL ELG+ ++E   K
Sbjct: 537 DRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLVELGVSVIEPEVK 590


>gi|308388667|gb|ADO30987.1| aspartyl-tRNA synthetase [Neisseria meningitidis alpha710]
          Length = 602

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 232/607 (38%), Positives = 352/607 (57%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVD--LGDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGADKTKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AAETKEA 602


>gi|325136852|gb|EGC59450.1| aspartyl-tRNA synthetase [Neisseria meningitidis M0579]
 gi|325142900|gb|EGC65262.1| aspartyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325198852|gb|ADY94308.1| aspartyl-tRNA synthetase [Neisseria meningitidis G2136]
 gi|325205530|gb|ADZ00983.1| aspartyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 602

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 233/607 (38%), Positives = 353/607 (58%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKTKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 VAETKEA 602


>gi|146329788|ref|YP_001210002.1| aspartyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|146233258|gb|ABQ14236.1| aspartyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 595

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 232/592 (39%), Positives = 346/592 (58%), Gaps = 6/592 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACF 59
           M ++RTH   ++  +     VR++GWVHR R HGGIIF+D+RD  G+ QVV +P +   F
Sbjct: 1   MSKFRTHYASEVTETLETQTVRVAGWVHRRRDHGGIIFIDLRDRSGLVQVVFDPANQETF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ VR+E+ L I+G V  R   T+N ++I+G+IE+ A  + ILS +   P  +    +
Sbjct: 61  AKAEQVRNEYCLSIEGRVRPRPEGTVNPDLISGKIEILAHDLNILSQSPTPPFQLDDLTD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR +DLRR  + KN++ R+++  S+R  +    F++  TP+LT ++PEGARD
Sbjct: 121 VSEEVRLKYRTIDLRRPQMQKNLILRSKVAASLRRYLNEHGFMDIETPMLTKATPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR + G  +ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF QLD+
Sbjct: 181 YLVPSRTHPGKVFALPQSPQLFKQMLMMSGFDRYYQIVRCFRDEDLRADRQP-EFTQLDI 239

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+E++DI+  ME ++RG+F+E  + + +   F R+ Y +A+RRY +DKPDLR P+ +
Sbjct: 240 ETSFLEEEDIMQLMETMIRGIFKEHLDVDLID-PFPRMTYAEAMRRYASDKPDLRIPLEL 298

Query: 300 HNVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
            +V +     +F+VF+ +    N       +P  G    R   D    +    G  GLAY
Sbjct: 299 IDVEDLVADCDFKVFANVAKQENGRVVALKLPNGGERLTRKEIDDYTAYVARYGAKGLAY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I    D S       P+ K L      AI  R+  Q GD  FF A             R 
Sbjct: 359 IKVN-DPSKIDGLQSPIVKFLGENVALAIIKRVQAQAGDIVFFGADKARIVNDAMGALRI 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  +L ++ C  +   W++DFP +E++E+E +    H+PFT P+    S   N+  ++ 
Sbjct: 418 KLGHDLDLLTCP-WAPMWVVDFPMFEFDEKEHRWTSVHHPFTAPKTDDLSELENNPAAVV 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG EI  G IR H  +V  Q   ++GI  E  + +FG L  A + G PPHGG
Sbjct: 477 SRAYDMVLNGTEIGGGSIRIHREDVQTQVLKSLGIDAEQAQEKFGFLLNALKYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           IA G+DR++M++ GAK++R+V  FP +Q    LL  +PS  S  Q +EL +R
Sbjct: 537 IAFGLDRLIMIMAGAKSIRDVMAFPKTQTAYCLLTDAPSEASDAQFKELHIR 588


>gi|126440880|ref|YP_001057727.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|166225330|sp|A3N5V6|SYD_BURP6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|126220373|gb|ABN83879.1| aspartate--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 600

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 330/597 (55%), Gaps = 8/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +    +  F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVELDAT-FPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   QDGD  FF A             R  I   
Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E+++EE +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVEAGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+ +  +
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|158320738|ref|YP_001513245.1| aspartyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158140937|gb|ABW19249.1| aspartyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 588

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 223/597 (37%), Positives = 342/597 (57%), Gaps = 11/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M+  RTH CG+L   ++G  V LSGWV + R  GG+IF+D+RD  GI Q+V +       
Sbjct: 1   MNLKRTHMCGNLNKDNIGEIVTLSGWVQKRRDLGGLIFVDLRDRSGIMQMVFDNKVSEDA 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F+ A+ + SE+V+ + G +  R  E+ N N+ TG IE+ A  IEIL+ ++  P+ +  + 
Sbjct: 61  FKEAEKLGSEYVITVKGKIYER--ESKNPNMPTGDIEVFADDIEILNQSQTPPIYIKDDD 118

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E++R KYR+LDLR+  + KN++ R ++   +R  +  E F+E  TP+LT ++PEGAR
Sbjct: 119 DVSENLRLKYRYLDLRKSKMQKNLILRHKVAQIVRNFLSNEGFLEIETPMLTKTTPEGAR 178

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G F+ALPQ+PQ +KQLLM SG +RYFQI  CFRDED R+DR P EF Q+D
Sbjct: 179 DYLVPSRVNPGKFFALPQSPQMFKQLLMVSGMERYFQIVKCFRDEDLRADRQP-EFTQID 237

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            EMSFV  +D++   E +L+ VF+E  N +  +  F R+ Y++A+ R+G+DKPD R    
Sbjct: 238 CEMSFVNAEDVMAINEKLLQTVFKEALNIDI-ALPFDRLTYEEAMERFGSDKPDTRFGFE 296

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + ++ E      F+VF+  +      +   +   G   +R    ++ ++ ++ G  GLA+
Sbjct: 297 LVDLGEVIKDCGFKVFTSAIESGGAVKAINVKGHGDQFSRKDITKLEDYVKNYGAKGLAW 356

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +              P+AK        A+    + + GD   F+A             R 
Sbjct: 357 LKIT-----EEGVTSPIAKFFTEEEMAAVLKTTNAEQGDLVLFVADKKQVVYDALGHLRV 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+ L +++ + F+  W+ +FP +E++EEE++    H+PFT P      L   +    +
Sbjct: 412 EVAKILNMLDKDEFKLLWVTEFPLFEYDEEEQRYAAKHHPFTSPMDEDIELMVTNPEKAR 471

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G IR H SE+  + F  +G S+E    +FG L  AF+ G PPHGG
Sbjct: 472 AKAYDIVLNGYEIGGGSIRIHSSELQQKMFKALGFSEEEAWEKFGFLLEAFKYGTPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DR+VMLL    N+R+V  FP +QN    L  +P+     QL EL +R+    
Sbjct: 532 IAFGLDRLVMLLTKEDNIRQVIAFPKTQNATCPLTNAPTFADERQLDELSVRVHIKE 588


>gi|225023970|ref|ZP_03713162.1| hypothetical protein EIKCOROL_00837 [Eikenella corrodens ATCC
           23834]
 gi|224942995|gb|EEG24204.1| hypothetical protein EIKCOROL_00837 [Eikenella corrodens ATCC
           23834]
          Length = 602

 Score =  630 bits (1624), Expect = e-178,   Method: Composition-based stats.
 Identities = 232/605 (38%), Positives = 351/605 (58%), Gaps = 12/605 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F++A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFKLAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +++G+IE+ A++IEIL+ A   P  +  +    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMVSGKIEILAKEIEILNPAATPPF-MIDDENISET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R + R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLQNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF+E    +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKEALGVD--LGDFPRMPYSEAMFYYGSDKPDMRISLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR- 362
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRAAADMKGGRVVALRVPNGAKLSRKEIDEYTQFVGIYGAKGLAYIKVND 357

Query: 363 ---LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              L    N     P+ K L+  + + I  R   Q+GD  FF A             R  
Sbjct: 358 VTNLSNGENSGLQSPIVKFLSESSLQEIIKRTGAQNGDIIFFGADKAKVVNEAIGALRIK 417

Query: 420 IAQELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           I +E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D  +
Sbjct: 418 IGKEHGAENGYFVDEWKPLWVVDFPMFEYDEENDRWAAMHHPFTSPKPGHEDLMESDPEN 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G IR H +++  + F+ + I+ E  +N+FG L    + G PPH
Sbjct: 478 CLARAYDMVLNGWEIGGGSIRIHRADIQEKVFAALKITPEEQQNKFGFLLDNLKFGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V L+  A+++R+V  FP +Q   DLL+ +P+ V   QLREL LR+ +   
Sbjct: 538 GGLAFGLDRLVALMAQAESIRDVIAFPKTQRAQDLLVDAPNHVDELQLRELHLRLRQKQT 597

Query: 597 KILKI 601
           +  + 
Sbjct: 598 EQKEA 602


>gi|45441698|ref|NP_993237.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|45436560|gb|AAS62114.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
          Length = 598

 Score =  629 bits (1623), Expect = e-178,   Method: Composition-based stats.
 Identities = 220/592 (37%), Positives = 329/592 (55%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    FE A 
Sbjct: 2   RTEYCGQLNLSHVGPSVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDHKAAFEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN ++ TG++E+ A  + I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQINKDMSTGEVEIFANTLNIINRSEP--LPLDSNQINSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMADRLKSRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +   ME ++R +++E    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MSADQVREVMEKLVRELWQETKGVD--LGDFPVMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
                 EF+VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 SLVKDVEFKVFSGPANDAKGRVAALRVPGGAQLSRKQIDEYGQFVGIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    +AI V    + GD  FF A             R  + ++
Sbjct: 357 RAAGLEGVQSPIAKFLSAEVLDAILVATQAESGDILFFGADSYKIVTDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     +   W++DFP +E ++ E  +   H+PFT P+            +  A  YD
Sbjct: 417 LELTRLGTWAPLWVVDFPMFE-DDSEGGLTAMHHPFTAPKDMSPEQLAAAPTTAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRTEMQQTVFGILGITEDEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +V   
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELSISVVAKK 587


>gi|325842220|ref|ZP_08167637.1| aspartate--tRNA ligase [Turicibacter sp. HGF1]
 gi|325489687|gb|EGC92046.1| aspartate--tRNA ligase [Turicibacter sp. HGF1]
          Length = 585

 Score =  629 bits (1623), Expect = e-178,   Method: Composition-based stats.
 Identities = 225/592 (38%), Positives = 353/592 (59%), Gaps = 12/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           RTH+ G+L + +VG  V L GWV + R  GG++F+D+RD YG+TQ+VANP+       E+
Sbjct: 3   RTHNNGELRLENVGQVVELKGWVAKSRNLGGLVFIDLRDRYGMTQLVANPETVSPEVLEV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  VR+E+V+ + G+V  R ++  N N+ TG IE+  +++ I+S AE  PL +  E +  
Sbjct: 63  ANKVRNEYVIAVKGIVAERQSK--NPNMPTGDIEVVLEQLTIISEAEMTPLIIADETDAL 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR  + KN + R  I+ S+R  + +++FIE  TP L  S+PEGARD+L
Sbjct: 121 EDTRLKYRYLDLRRPMMQKNFILRHNILKSVRSYLDSQDFIEVETPYLNKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SGF+RY+Q+A CFRDED R+DR P EF Q+D+E 
Sbjct: 181 VPSRVHEGEFYALPQSPQIFKQLLMVSGFERYYQVARCFRDEDLRADRQP-EFTQIDIET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q++I+N +E +L  + ++    +     F R+ Y++A+ RYG+DKPD R  + +  
Sbjct: 240 SFLTQEEIMNLVEEMLVKMMKDVKGLDI-PRPFPRLSYEEAMGRYGSDKPDTRFEMELIP 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +     +  F VF+  +      +   +       +R   D++ ++ +     GLA++  
Sbjct: 299 LNHVVANCGFSVFASTVEAGNEVKALCVKGAAERFSRKDIDKLTDFVKKYKAKGLAWVKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                      GP+AK  N     +I+   + + GD   F+A             R H+A
Sbjct: 359 V-----EEGFNGPIAKFFNEDEVASIKAATNAEIGDLLLFVADTKAVVADSLGALRLHLA 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +ELG+I+ + F F W++D+P +E++EE  +   AH+PFTMP          D  + KA  
Sbjct: 414 KELGVIDESKFNFLWVIDWPLFEYDEEAGRFFAAHHPFTMPSLDTLDTFDTDSHNAKAQA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  ++  + F  +G +KE  E +FG L  AF+ G PPHGG+A 
Sbjct: 474 YDIVLNGYELGGGSLRIYRPDIQSRMFEALGFTKEEAEEQFGFLMNAFKYGTPPHGGLAL 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G+DRI M+L G++++R+V  FP + +    +  +P  VS  QL EL +++ +
Sbjct: 534 GLDRIAMILTGSQSLRDVIAFPKNASATCPMTEAPGRVSEAQLTELHIQLKK 585


>gi|169829345|ref|YP_001699503.1| aspartyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|238688193|sp|B1HV71|SYD_LYSSC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|168993833|gb|ACA41373.1| Aspartyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 589

 Score =  629 bits (1623), Expect = e-178,   Method: Composition-based stats.
 Identities = 225/593 (37%), Positives = 345/593 (58%), Gaps = 8/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH+  +L  +  G  V L GWV R R  GG+IF+D+RD  GITQVV +PD +    +A 
Sbjct: 4   RTHASNELSETLQGEKVVLKGWVQRRRDLGGLIFIDLRDRTGITQVVFSPDVAEAHALAD 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I+G V+ R+ + IN N+  G+IE+ A ++ +++ A+  P  +    +  E 
Sbjct: 64  KVRSEYVIEIEGTVILRTEDQINPNVPNGKIEVEATRLVVINTAKTTPFQIEDRTDVSED 123

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  +      R+ +  ++R  +  E F+E  TPILT S+PEGARD+LVP
Sbjct: 124 LRLKYRYLDLRRPVMFDTFKMRSDVTRTIRNFLQNEGFLEVETPILTKSTPEGARDYLVP 183

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM +GF++YFQIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 184 SRVHEGEFYALPQSPQLFKQLLMVAGFEKYFQIARCFRDEDLRADRQP-EFTQVDIETSF 242

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + Q+++L   E +++ V +E    +     F R+ Y +A+ RYG+DKPD+R  + +  + 
Sbjct: 243 LTQEEVLEMNERLIQAVMKEVKGIDI-PAPFQRMKYQEAMDRYGSDKPDVRFGLELVALN 301

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           + F    F+VF+  ++     +   I       +R   D + ++    G  GLA++    
Sbjct: 302 DVFEGCGFKVFADTVAQGKQVKSINIKGAADKYSRKDMDELTKFVGIYGAKGLAWLKVT- 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
                    GP+AK  +     A+  R+  + GD   F+A       +     R  + Q+
Sbjct: 361 ----EEGLNGPIAKFFDEALAAALIERMGAEVGDILVFVADKASVVAASLGALRTKLGQD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +I+ + F F WI D+P +E++EE+ +   AH+PFT P      L   D  +++A  YD
Sbjct: 417 LDLIDESQFAFLWITDWPLFEYSEEDGRYYAAHHPFTRPFDEDIPLMDTDPSAVRAQAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R +  ++  + F  +G S+E  + +FG L  AF+ G+PPH G+A G+
Sbjct: 477 IVLNGYELGGGSLRIYERDLQEKMFELLGFSEEEAQAQFGFLLEAFEYGVPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR VMLL G  N+R+   FP + +   L+  +PS VS EQL EL L I    K
Sbjct: 537 DRFVMLLAGRHNLRDTIAFPKTASASCLMTEAPSEVSPEQLSELSLAIKPFRK 589


>gi|239999558|ref|ZP_04719482.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240014734|ref|ZP_04721647.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240017182|ref|ZP_04723722.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
 gi|240121257|ref|ZP_04734219.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
 gi|268595370|ref|ZP_06129537.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268548759|gb|EEZ44177.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|317164806|gb|ADV08347.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 602

 Score =  629 bits (1623), Expect = e-178,   Method: Composition-based stats.
 Identities = 234/607 (38%), Positives = 355/607 (58%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +G  V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLGIAGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +++GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGADKAKVVNEAVGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AVETKEA 602


>gi|268589741|ref|ZP_06123962.1| aspartate--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291314893|gb|EFE55346.1| aspartate--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 589

 Score =  629 bits (1623), Expect = e-178,   Method: Composition-based stats.
 Identities = 221/594 (37%), Positives = 330/594 (55%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT+ CG L ++  G  V LSGWV+R R  GG+IF+D+RD  GI QV  +PD    FE A 
Sbjct: 2   RTNYCGQLNIAHEGQKVTLSGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDRKDIFEKAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R     N ++ TG+IE+ A+++ + + +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQKNKDMATGEIEVFAEELNVFNKSEP--LPLDSNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 RRLKYRYLDLRRPEMSDRLRTRAKITSFVRNFMDKEGFLDVETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++R ++ E    +    NF  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREIMERMIRNLWLEVKGVD--LGNFPIMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +   G         G    R   D   ++    G  GLA++    
Sbjct: 297 DIVKDVEFAVFSGPANDPKGRVAALKVPGGAAMTRKQIDEYGQFVGIYGAKGLAWMKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L+      +  R    DGD   F AG            R  + ++
Sbjct: 357 RAKGLDGIQSPVAKFLSEDVINQLLDRTGAVDGDILLFGAGAKNVVTDSMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             + + N ++  W++DFP +E +  E  +   H+PFT P+        +      A  YD
Sbjct: 417 FELTDLNSWQPLWVIDFPMFE-DNGEGGLTAMHHPFTSPKDFSPEELASKPEEAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    FS +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRNEMQQTVFSILGINEEDQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+VMLL G  N+R+V  FP +     L+  +PS  + + L EL + +V   ++
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTNAPSHANPDALTELAIAVVAKDEE 589


>gi|329724666|gb|EGG61172.1| aspartate--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 588

 Score =  629 bits (1623), Expect = e-178,   Method: Composition-based stats.
 Identities = 236/595 (39%), Positives = 343/595 (57%), Gaps = 11/595 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M++ RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD     
Sbjct: 1   MNK-RTTYCGLVTEEFLNEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGE 117
            ++A++VRSE+V+ + G+V  R  ETIN  I TGQ+E+    IEI++ +E          
Sbjct: 60  LQVAETVRSEYVVEVQGVVTKRDTETINPKIKTGQVEVQVSNIEIINKSETPPFSINEEN 119

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGA
Sbjct: 120 VNVDENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGA 179

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+
Sbjct: 180 RDYLVPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQV 238

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV+Q+DI+   E++LR V ++    + VS  F R+ Y +A+ R+G+DKPD R  +
Sbjct: 239 DIEMSFVDQEDIIAMGEDMLRKVVKDVKGID-VSGPFPRMTYAEAMDRFGSDKPDTRFGM 297

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + NV++      F+VF   +  N   +            R   D + E+    G  GLA
Sbjct: 298 ELINVSQLGKEMNFKVFKDTVDNNGEIKAIVAKDAANKYTRKDMDALTEFVNIYGAKGLA 357

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++    D        GP+A+    VN E ++   + + GD   F+A  P          R
Sbjct: 358 WVKVVDD-----GLSGPIARFFEDVNVETLKQLTEAKPGDLVMFVADKPNVVAQSLGALR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ELG+I+ +   F W+ D+P  E++E+ K+   AH+PFT P+         +  ++
Sbjct: 413 IKLAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEPENV 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G IR H  E+  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 473 QANAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFTNEQAQEQFGFLLDAFKYGAPPHG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIA G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL+EL LRI 
Sbjct: 533 GIALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLQELSLRIR 587


>gi|240116260|ref|ZP_04730322.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|240128757|ref|ZP_04741418.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268601925|ref|ZP_06136092.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268687142|ref|ZP_06154004.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268586056|gb|EEZ50732.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268627426|gb|EEZ59826.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 602

 Score =  629 bits (1623), Expect = e-178,   Method: Composition-based stats.
 Identities = 234/607 (38%), Positives = 355/607 (58%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +G  V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLGIAGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +++GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGADKAKVVNEAVGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AVETKEA 602


>gi|126700354|ref|YP_001089251.1| putative aspartyl-tRNA synthetase [Clostridium difficile 630]
 gi|255101910|ref|ZP_05330887.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255307779|ref|ZP_05351950.1| putative aspartyl-tRNA synthetase [Clostridium difficile ATCC
           43255]
 gi|115251791|emb|CAJ69626.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Clostridium difficile]
          Length = 595

 Score =  629 bits (1623), Expect = e-178,   Method: Composition-based stats.
 Identities = 218/597 (36%), Positives = 336/597 (56%), Gaps = 12/597 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEI 61
            RTH CG+L   ++   V L GWV + R  GG++F+D+RD  G+ Q+V +   D   FE 
Sbjct: 8   KRTHYCGELREKNINEEVVLMGWVQKKRNLGGLVFVDLRDTSGLCQIVFDTDVDKEAFEK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ + +E+V+ + G V  R ++  N N+ TG IE+ A ++ +L+ +E  P+ +  + +  
Sbjct: 68  AEKLGAEFVIAVKGKVCERQSK--NPNMPTGDIEIFATELRLLNKSETPPIYIKDDDDVS 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLR+ ++ +N+  R +++N  R  +    F E  TP L A +PEGARD+L
Sbjct: 126 EALRLKYRYLDLRKPSMQRNLKLRHKVMNITRNYLSNNRFCEIETPFLIAPTPEGARDYL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ YKQLLM SG DRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 186 VPSRVNPGKFYALPQSPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D+++ +E +L  +F+E  +   ++    ++ Y +A+ +YG+DKPD R    + +
Sbjct: 245 SFVEQEDVMSMIEGLLEAIFKEVLDVE-LALPLPKMTYAEAMSKYGSDKPDTRFGYELTD 303

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++   +  F+VF+             +  K     R     + E A++    GLA++  
Sbjct: 304 ISDVVCNCGFKVFADATQPGKSVRGINVKGKADDFTRKQISSLEEHAKTYRAKGLAWMKV 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+AK  N     AI  R++ + GD   F+A             R  +A
Sbjct: 364 -----GQEGVTSPIAKFFNEEEMNAILTRMNAEVGDLLLFVADKNSIVFDALGQVRLEVA 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480
             L +++ N +   W+ +FP +E +EE       H+PFT P       L+  D  S++A 
Sbjct: 419 NRLNLLDKNVYNLLWVTEFPVFEEDEETGTFSAMHHPFTSPMDEDLDKLEEGDKSSLRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R   S+V  + F  +G ++E    +FG L  AF+ G PPH G+A
Sbjct: 479 AYDIVLNGYEIGGGSVRISNSDVQSRMFKALGFTEERANEKFGYLLEAFKYGTPPHAGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VMLL G  N+REV  FP +QN    +  +P+    EQL EL +++     +
Sbjct: 539 FGLDRLVMLLAGTDNIREVIAFPKNQNAVCPMTNAPTLAEDEQLEELSIKVDIKDNE 595


>gi|85708162|ref|ZP_01039228.1| aspartyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85689696|gb|EAQ29699.1| aspartyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 604

 Score =  629 bits (1623), Expect = e-178,   Method: Composition-based stats.
 Identities = 326/608 (53%), Positives = 419/608 (68%), Gaps = 10/608 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C  L   +VG  VRLSGW+HR R HGG++F+D+RDHYGITQVVA+ DS    
Sbjct: 1   MHAYRSHTCAQLSAENVGETVRLSGWMHRKRDHGGVLFVDLRDHYGITQVVADEDSPALP 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + +R+E V+ IDG V +R+ ET+N ++ TG+IE+ A+ I + S A+ELP+PV    EY
Sbjct: 61  VLEKLRAESVVTIDGEVKARTPETVNKDLPTGEIEIFARSITVQSAADELPMPVASGEEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE+IR KYRFLDLRR+ +H+NI+ R+++I S+R RMI + F E  TPILTASSPEGARDF
Sbjct: 121 PENIRLKYRFLDLRREVMHRNIMLRSQVITSLRQRMIGQGFTEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++  SFYALPQAPQ +KQ+LM SGFDRYFQIAPCFRDED R+DR   EFYQLD E
Sbjct: 181 LVPSRMHPNSFYALPQAPQMFKQMLMVSGFDRYFQIAPCFRDEDLRADRSL-EFYQLDFE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT--VSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+D+   +E VL GVFEEFS G T   S  F RI Y +A+ +YGTDKPDLRNP+I
Sbjct: 240 MSFVTQEDVFQALEPVLAGVFEEFSGGKTVTKSGEFPRIPYAEAMLKYGTDKPDLRNPLI 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +VT HF  S F +F KI+       V   P +    +R F D MN WARS+G  GL Y
Sbjct: 300 ISDVTSHFEKSGFGLFEKIVGGGGVVRVIPAP-ETNEKSRKFFDDMNNWARSEGFAGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  +  E G     GP+AK+      E +   L +   D  FF AG        A  AR 
Sbjct: 359 VTRKGGEFG-----GPIAKNHGPDRMEELYNELGLGPDDGLFFAAGKEKDAAKLAGAART 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA++L +I  +CF+FCWI+DFP YE++EE KK+DF+HNPF+MPQG ME+L+  D L IK
Sbjct: 414 QIAEQLELIEQDCFKFCWIVDFPMYEYDEEAKKVDFSHNPFSMPQGEMEALESMDPLEIK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG+E++SG IRNH  E+M +AF   G     V+  FGG+  AF+ G PPHGG
Sbjct: 474 AWQYDIVCNGYELSSGAIRNHKPEIMYKAFEIAGYDNATVDKEFGGMIEAFKLGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
            A GIDRIVMLL G + +REV  FPM+Q   DL+M +PS  +  QLREL LR+VE  +K 
Sbjct: 534 SAPGIDRIVMLLAGEEAIREVIAFPMNQKGEDLMMSAPSKATPAQLRELHLRLVEPAQKA 593

Query: 599 L-KISVTT 605
             K  + +
Sbjct: 594 QPKADIVS 601


>gi|258645315|ref|ZP_05732784.1| aspartate--tRNA ligase [Dialister invisus DSM 15470]
 gi|260402664|gb|EEW96211.1| aspartate--tRNA ligase [Dialister invisus DSM 15470]
          Length = 600

 Score =  629 bits (1623), Expect = e-178,   Method: Composition-based stats.
 Identities = 237/601 (39%), Positives = 355/601 (59%), Gaps = 11/601 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           MH  R+  CG +   D G  + L+GWV+  R HGG+IF+D+RD  GI QVV +P      
Sbjct: 7   MH--RSCGCGRVTEKDCGKELTLAGWVNTRRDHGGLIFIDLRDRSGIVQVVMSPQYGEDA 64

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F  A+ VRSE+VL I G+V  RS ET+N  + TG+IE+   ++ +L+ A+  P  V    
Sbjct: 65  FHKAEDVRSEYVLAIRGIVRERSPETVNPKMQTGKIEVVVSEMRVLNKAKTPPFYVEDGI 124

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E++R K+R++DLRR  + +N++ R +I++ MR  + A +F+E  TPILT S+PEGAR
Sbjct: 125 DVDETVRLKHRYIDLRRPEMQRNLIMRHKIVHEMRQFLDAHDFLEVETPILTKSTPEGAR 184

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G FYALPQ+PQ +KQLLM SG +RYFQIA CFRDED R+DR P EF QLD
Sbjct: 185 DYLVPSRVNPGKFYALPQSPQLFKQLLMVSGLERYFQIARCFRDEDLRADRQP-EFTQLD 243

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E+SF +QD IL+ ME++++ +F+   N +     F RI +DDA+  YG+DKPDLR  + 
Sbjct: 244 IELSFEDQDFILDLMEHMMQRIFKNVLNVDI-QIPFKRITWDDAMNLYGSDKPDLRFDMH 302

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
            +++++    + F+VF  +L      +   +        R   D + ++  + G  GLA+
Sbjct: 303 FYDISDLLRDTGFKVFRNVLDNGGIVKAITVK-GDAAIPRRELDGLVDYVGNYGAKGLAW 361

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I    D  G++     + K L       I    + ++GD    IA  P        + R 
Sbjct: 362 IGLNKD--GSLKCQ--ITKFLGEDKIREIGKFCEAENGDLILIIADKPKVVAQALGELRL 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+ + +I+ N F F W+ DFP +E++EE+K+    H+PFT P+         D   + 
Sbjct: 418 EMARRMNLIDENEFCFRWVTDFPMFEYSEEDKRWVAEHHPFTAPRDEDVQYLLTDPSKVY 477

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E   G +R +  E+  + F  +GI+ E  + +FG L  AF+ G PPH G
Sbjct: 478 AKAYDMVLNGVEAGGGSLRIYQEELQEKVFKAIGITHEEAQEKFGFLLDAFRYGAPPHAG 537

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           IA G+DR+VML+L   ++R+V  FP +Q+  D +  +PS V   QL+EL +R+    +K 
Sbjct: 538 IALGLDRLVMLMLRLGSIRDVIAFPKTQSAIDQMTQAPSEVVDMQLKELHIRVDVKKEKN 597

Query: 599 L 599
           L
Sbjct: 598 L 598


>gi|327394178|dbj|BAK11600.1| aspartyl-tRNA synthetase AspS [Pantoea ananatis AJ13355]
          Length = 592

 Score =  629 bits (1622), Expect = e-178,   Method: Composition-based stats.
 Identities = 220/597 (36%), Positives = 327/597 (54%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  + D    F++A 
Sbjct: 2   RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIAQVFFDADHQDAFQLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N+++ TG +E+ A  + I++ AE   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARDEKNRNSDMATGDVEVFAHALNIINRAEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMVERLKTRAKITSFVRRFMDDAGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R +++     +     F ++ + +A+ RYG+DKPDLRNP+ + +V 
Sbjct: 239 LTAPQVREIMERMIRELWQSVKGVDLGE--FPQMTFAEAMHRYGSDKPDLRNPMELVDVG 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DLLKTVEFQVFSGPANDEKGRVAALRVPGGAQLSRKQIDEYGKFVEIYGAKGLAWMKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    E +  R   QDGD  FF A             R  + ++
Sbjct: 357 RAMGLEGVQSPVAKFLNADIVETLLSRTSAQDGDIIFFGADRAKVVADALGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I +   +   W++DFP +E + +E  +   H+PFT P+         D     A  YD
Sbjct: 417 LQITDDKAWAPLWVVDFPMFEED-DEGGLAAMHHPFTAPKEMSAEQLAADPTQAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H   +    FS +GI +     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGNMQQTVFSILGIEEHEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+ MLL G  N+R+V  FP +     ++  +PS  +   L ELG+++V+  K   K
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACMMTEAPSEANPASLLELGIQVVKKDKLENK 592


>gi|242277624|ref|YP_002989753.1| aspartyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242120518|gb|ACS78214.1| aspartyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 607

 Score =  629 bits (1622), Expect = e-178,   Method: Composition-based stats.
 Identities = 240/594 (40%), Positives = 342/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           RTHSC ++  +++G  V + GWV   R HGG+IF+D+RD  G+TQVV +P+      E A
Sbjct: 24  RTHSCNEITAANMGEKVLIMGWVQFRRDHGGLIFIDLRDREGLTQVVFSPEHNADAHERA 83

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++RSE+V+ I G V  R     N N+ TG+IE+   + ++L+ +E  P  +    +  E
Sbjct: 84  HAIRSEYVVAIKGEVRERPDGMRNTNLTTGEIEIVVDEWKLLNTSETPPFAIEDRSDASE 143

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLRR  L KN + R +   S+R  +    F+E  TP+LT S+PEGARDFLV
Sbjct: 144 MLRLKYRFLDLRRPVLAKNFILRNKAAQSVRRYLDNLGFLEIETPVLTKSTPEGARDFLV 203

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQ+LM SG DRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 204 PSRMNNGDFYALPQSPQLFKQMLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 262

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV ++ ++   E ++R VF+E      +  +F R+ Y DA+R YG DKPD+R  + +   
Sbjct: 263 FVNEEQVMGMAEEMVRTVFKETIETE-LPASFPRMTYADAMRDYGCDKPDVRFDLKLQEA 321

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+ F  S+F+VF+    +            G   +R   D   ++    G  GLA+I  +
Sbjct: 322 TDIFKGSDFKVFASSELIK-----ILRVPNGAELSRKEIDEYTKFVEIYGSKGLAWIKVK 376

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D         P+ K  +      +R   + Q GD  FF AG      +  A  R  + +
Sbjct: 377 EDG----EWQSPIVKFFSEEECAKLRELTNCQPGDILFFQAGAADIVNAALAALRIKLGE 432

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              +I+ + F   W+ DFP  E+N +EK+    H+PFT PQ G     G+      A  Y
Sbjct: 433 RFELIDESKFAPLWVTDFPLLEYNADEKRYVARHHPFTSPQEGQIDELGDKPAEALARAY 492

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G IR H  E+  + F+ +GI +E    +FG L  A Q G PPHGGIA G
Sbjct: 493 DLVMNGYEVGGGSIRIHTPEMQQKMFAALGIDEEEARAKFGFLMDALQFGAPPHGGIAFG 552

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR++M+L GAK++R+V  FP +Q    L+  +PS VS  QLRELG+R+ E  +
Sbjct: 553 LDRLIMILCGAKSIRDVIAFPKTQKATCLMTEAPSGVSSTQLRELGVRLREKKE 606


>gi|303245827|ref|ZP_07332109.1| aspartyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302492610|gb|EFL52478.1| aspartyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 601

 Score =  629 bits (1622), Expect = e-178,   Method: Composition-based stats.
 Identities = 244/599 (40%), Positives = 341/599 (56%), Gaps = 14/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           R+H CG L  SDVGS V L GW    R HGG+IF+D+RD  G+TQVV  P+ +    E A
Sbjct: 15  RSHDCGALRASDVGSEVCLMGWAQFRRDHGGLIFIDLRDRGGLTQVVFCPEGSAEALERA 74

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+E+VL + G V  R     N  + TG+IE+   + ++L+ A   P P+    +  E
Sbjct: 75  HVLRTEYVLAVKGRVRPRPEGMANPGMPTGEIEVEITEFKLLNTAATPPFPIEDRIDASE 134

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  L  N++ R   + S+R  +    F+E  TP+LT S+PEGARDFLV
Sbjct: 135 LLRLKYRYLDLRRPKLAGNLILRHHAVQSIRRYLDGLGFLEVETPVLTRSTPEGARDFLV 194

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N GSFYALPQ+PQ +KQLLM SGFDRY+Q+  CFRDED R+DR P EF Q+D+EMS
Sbjct: 195 PSRINNGSFYALPQSPQLFKQLLMMSGFDRYYQVVKCFRDEDLRADRQP-EFTQVDIEMS 253

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ I+   EN++R +F+E  +   + + F R+ Y DAIR YG DKPD+R  + + +V
Sbjct: 254 FVDEEQIMGMAENMVRTMFKEAMDI-ALPDVFPRMTYADAIRDYGLDKPDVRFGLKLVDV 312

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE    S+F+VF+K   V          A G   +R   D + E+ +  G  GLA+I  +
Sbjct: 313 TEVVRGSQFQVFAKAELVKG-----IRVAGGAALSRKEIDDLTEFVKIYGAKGLAWIKIK 367

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E        P AK L+      +     ++ GD  FF AG      +     R  + +
Sbjct: 368 EGE-----WQSPFAKFLSDEERAGLAEAFGLEVGDIVFFQAGAAEMVNTALGYLRIQLGE 422

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              +I    F   W+ DFP  E++ E K+    H+PFT PQ G             +  Y
Sbjct: 423 RFSLIPEGSFAPVWVTDFPLLEYDPEAKRFAAKHHPFTAPQSGHLEKLAEAPGQALSRAY 482

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG EI  G IR H        F+ +GI  +  E++FG L +A + G PPHGGIA G
Sbjct: 483 DLVLNGNEIGGGSIRIHDRATQKAMFAALGIEDQEAEDKFGFLLKALEFGAPPHGGIAFG 542

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKI 601
           +DR++M+L GAK++R+V  FP +Q    LL  +P+ VS  QLRELG+++    K   K 
Sbjct: 543 LDRLIMILAGAKSIRDVIAFPKTQKAMCLLTDAPAGVSAGQLRELGIKLRSRDKDKDKA 601


>gi|90417107|ref|ZP_01225035.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331123|gb|EAS46379.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 591

 Score =  629 bits (1622), Expect = e-178,   Method: Composition-based stats.
 Identities = 232/594 (39%), Positives = 341/594 (57%), Gaps = 7/594 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEI 61
            YR++ CG      +   V L GWV R R HGG+IF+D+RD  GI QVV +PD    FE 
Sbjct: 1   MYRSNYCGLFTSEHIDQEVTLCGWVDRRRDHGGVIFVDLRDREGIVQVVFDPDAGEFFEQ 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A SVRSE+VL + G+V +RSA T+N N+ TG+IE+    +EIL+ A   P  +       
Sbjct: 61  ADSVRSEYVLKVTGVVRARSAATVNPNMATGEIEVYGTALEILNSAVTPPFQLDDYVTVG 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR++DLRR  +  ++  R++I +S+R  ++ + F++  TPI+T ++PEGARD+L
Sbjct: 121 EDVRLKYRYMDLRRKEMQNSLRFRSKISSSIRNYLVDDGFLDIETPIMTRATPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           +PSR + G F+A+PQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E 
Sbjct: 181 IPSRTHPGQFFAMPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIEA 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++DI++T E ++RGVF E    +  +  F R+ Y DA+ +YG+DKPDLR P+ +  
Sbjct: 240 SFVDEEDIMSTTETMIRGVFSEHMGVDFET--FPRMTYADAMHKYGSDKPDLRIPLELVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V +     EF+VF+   +             G   +R   D   ++    G  GLA+I  
Sbjct: 298 VKDLLKDIEFKVFAGPANDPACRVTALKVPGGADISRKKIDEYTKFVSIYGAKGLAWIKV 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E+G      P+ K L    T  I  RLD ++GD  FF A             R  + 
Sbjct: 358 NAIETGIEGLQSPIIKFLGDEVTMNIMQRLDAKNGDIVFFGADKSQVVSEALGALRCKVG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L +  C  +   W++DFP +E   +   +   H+PFT P    E LK N   +  +  
Sbjct: 418 ADLDLYTC-VWAPMWVIDFPMFE-TTDSGALTPLHHPFTAPSCSEEELKAN-PGAALSRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H   +    F  +GI+ E    +FG L  A + G PPHGG+A 
Sbjct: 475 YDMVLNGCELGGGSIRIHDQNMQQTVFEVLGINAEEQREKFGFLLDALKHGAPPHGGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR++ML+ GA ++R+V  FP +Q+   LL  +P  V   QLR+L +++    
Sbjct: 535 GLDRLIMLMTGADSIRDVIAFPKTQSAACLLTDAPGVVDNSQLRDLSIKLRTKE 588


>gi|209519041|ref|ZP_03267849.1| aspartyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209500553|gb|EEA00601.1| aspartyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 599

 Score =  629 bits (1622), Expect = e-178,   Method: Composition-based stats.
 Identities = 229/599 (38%), Positives = 332/599 (55%), Gaps = 8/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F++A+
Sbjct: 4   RSEYCGLVTEELLGQSVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRADMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + G+V  R   T NA++ +G+IE+    + +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQVKGVVRGRPEGTTNASLKSGKIEVLCHDLIVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+           F  + Y +A+RR+G+DKPDLR  +    +T
Sbjct: 242 LSEQEIRDLFEAMIRHVFKTTIGVQLDEK-FPVMEYAEAMRRFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMRDVDFKVFSTPANTKDGRVAALRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+    +AI  R   QDGD  FF A             R  I   
Sbjct: 361 AAKGRDGLQSPIVKNLHDEALKAIIERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N    + ++  W++DFP +E++EE+ +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R +  EV  + F  + I+ E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIYREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+     K+
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSEVDERQLRELHIRLRSPEPKV 599


>gi|260881133|ref|ZP_05403711.2| aspartate--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260849619|gb|EEX69626.1| aspartate--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 601

 Score =  629 bits (1622), Expect = e-178,   Method: Composition-based stats.
 Identities = 232/602 (38%), Positives = 349/602 (57%), Gaps = 12/602 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACF 59
             RTH CG L  +DVG  V L GWV R R HGG+IF+D+RD  G  QVV +    +   F
Sbjct: 7   MKRTHHCGVLRKTDVGQEVVLCGWVSRRRDHGGLIFVDMRDRSGFVQVVFDEAAMNEGTF 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+R+E+ + + G + +RS ETIN NI TG+IE+   ++ IL+ ++  P  +    +
Sbjct: 67  HKAESLRNEFCIAVRGKIRARSEETINPNIETGEIEVVCAELRILNPSKTPPFYIQDGVD 126

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLRR  + KNI+ R R+   MR       F+E  TP+L  S+PEGARD
Sbjct: 127 VDEMVRLKYRYLDLRRPEMQKNIILRHRVTKIMRDFFDRNGFLEIETPMLCKSTPEGARD 186

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSRVN G FYALPQ+PQ +KQ+L  +GF++YFQI  CFRDED R+DR P EF QLD+
Sbjct: 187 FLVPSRVNPGEFYALPQSPQIFKQILQVAGFEKYFQIVRCFRDEDLRADRQP-EFTQLDI 245

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++QDDIL  ME +++ +F++    + V   F R+ +D A+ +YG+DKPDLR  + +
Sbjct: 246 EMSFMDQDDILTLMEEMIKELFKKAIGAD-VPTPFERMEWDTAMDKYGSDKPDLRFDMPL 304

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +++E+   S F+VF+ ++      +   +        R   D + ++ +  G  GLA+I
Sbjct: 305 MDISEYVKGSSFKVFNSVIENGGMVKCIKVDGYADIPRRR-LDDLVKFVQVYGAKGLAWI 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +            P  K         I      + GD    +A   L   +     R  
Sbjct: 364 QYT-----EEGIKSPFKKFYEDETFAKIAEATGAKTGDLLLVVADKRLVVDTALGQLRLE 418

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND-LLSIK 478
           + +E G+I+ +   F W++DFP YEW++EE +    H+PFT P+     L   D +  +K
Sbjct: 419 MGKERGLIDPDKLRFLWVVDFPMYEWSDEEHRFKAMHHPFTAPRDEDIDLLNTDRMGDVK 478

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG EI  G +R + +++  + F ++G++ E    +FG +  AFQ G PPHGG
Sbjct: 479 AKAYDMVLNGVEIGGGSLRIYNADLQEKVFESLGLTPEQAHTKFGFMMDAFQYGTPPHGG 538

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +A G+DR+VML+    ++R+V  FP +Q+  D++  +PS V  +QLREL +R     K+ 
Sbjct: 539 LAFGLDRLVMLMAKRPSIRDVIAFPKTQSARDVMSNAPSPVDEKQLRELSIRTAVKKKEK 598

Query: 599 LK 600
            +
Sbjct: 599 KE 600


>gi|260893519|ref|YP_003239616.1| aspartyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865660|gb|ACX52766.1| aspartyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 597

 Score =  629 bits (1622), Expect = e-178,   Method: Composition-based stats.
 Identities = 241/590 (40%), Positives = 338/590 (57%), Gaps = 11/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEI 61
           YRTH CG LG +++G  V L+GWV R R HGG+IF+D+RD  G+ QVV +PD+    F +
Sbjct: 3   YRTHYCGTLGEAEIGQKVVLAGWVQRRRDHGGLIFVDLRDREGLVQVVFSPDTDPEAFAV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VRSE+VL ++G V  R   T N  + TG IE+ A    IL+ +   P  +       
Sbjct: 63  AEKVRSEYVLRVEGEVHRRPPGTENPKLKTGTIEVRATSCTILNPSRTPPFYIEDGINVD 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +YR+LDLRR  + + +  R R    +R  + A  F E  TP+LT S+PEGARD+L
Sbjct: 123 EDLRLRYRYLDLRRPEMQEALRLRHRAAKVVRDYLDAHGFWEVETPMLTRSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM +G DRYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 183 VPSRIYPGRFYALPQSPQLFKQLLMVAGVDRYFQIVRCFRDEDLRADRQP-EFTQIDLEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE +DIL   E ++  +  E      VS  F RI Y +A+  YGTD+PD+R  +++ +
Sbjct: 242 SFVEVEDILRLSEGLIATLCREIVGVE-VSLPFPRISYQEAMSLYGTDRPDIRYDLLLTD 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V++     EF+VFS+ +      +  A+P      +R   D +   A   G  GLAYI  
Sbjct: 301 VSDLVAEVEFKVFSQAVKEGGCVKGLAVP-GAANFSRKEIDELTRLAALFGAKGLAYIQL 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                       P+ K L     EA+R RL   +G    F+A             R+++A
Sbjct: 360 L-----PEGPKSPILKFLGEGVVEALRQRLQAGEGALLLFVADKREVVERSLGALRSYLA 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           Q+LG+       F W++DFP  E++  E +    H+PFT P+     L   +   ++A  
Sbjct: 415 QKLGLEKPG-LSFVWVVDFPLVEFDPAEGRYVTLHHPFTAPREEDVPLLETEPEKVRAKA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR +  ++  + F  +G+  E   ++FG L  A + G PPHGGIA 
Sbjct: 474 YDLVLNGVELGGGSIRINRRDLQEKVFRLIGLDLEEARDKFGFLLEALEYGAPPHGGIAF 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR++MLLLG + +R+V  FP +Q   DLL  +PS V+ EQLREL LR+
Sbjct: 534 GFDRLLMLLLGRQTIRDVIPFPKTQRAQDLLTQAPSPVTEEQLRELHLRV 583


>gi|73662438|ref|YP_301219.1| aspartyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|97196920|sp|Q49Y68|SYD_STAS1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|72494953|dbj|BAE18274.1| aspartyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 588

 Score =  629 bits (1622), Expect = e-178,   Method: Composition-based stats.
 Identities = 230/592 (38%), Positives = 340/592 (57%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG +  S +   V L GWVH  R  GG+IF+D+RD  G  Q+V NPD      + 
Sbjct: 3   KRTTYCGLVTESLLDQEVTLKGWVHNRRDLGGLIFVDLRDREGYVQIVFNPDFSEEALKT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ + GLV  R  +T+N  I TGQ+E+   +I I++ +E          +  
Sbjct: 63  AETVRSEYVVEVKGLVKKRDPQTVNPKIATGQVEVQVSEINIINKSETPPFAINEENQNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +   S+R  +  E F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDKEGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHDGEFYALPQSPQIFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D+++  E +L+ V ++  +       F R+ Y++A+ RYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVMDMGEEMLQNVVKDVKDVEI-PRPFPRMTYNEAMERYGSDKPDTRFEMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+E     +F+VF   ++ +   +            R   D + E+    G  GLA++ 
Sbjct: 301 NVSELGEEMDFKVFKDAVNNDGQVKAIVAKGAADQYTRKDIDALTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+A+     + E ++   + + GD   F+A  P          R  +
Sbjct: 361 VVDD-----GLSGPIARFFETTHIEKLQSLTNAESGDLVLFVADKPNVVAQSLGALRLKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I+ +   F W+ D+P  E++E+ K+   AH+PFT P+        ++  + +A 
Sbjct: 416 ARELDLIDESKLNFLWVTDWPLLEYDEDLKRYTAAHHPFTAPKQEDIEKLDSEPENAQAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G ++E  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDVVLNGYELGGGSIRIHNGELQAKMFEVLGFTEEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL G  N+R+   FP + +   LL  +PS VS  QL EL LRI 
Sbjct: 536 LGLDRLVMLLTGRTNLRDTIAFPKTASATCLLTDAPSEVSENQLEELSLRIR 587


>gi|15641179|ref|NP_230811.1| aspartyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|147674215|ref|YP_001216685.1| aspartyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153819872|ref|ZP_01972539.1| aspartyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|227081338|ref|YP_002809889.1| aspartyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229505240|ref|ZP_04394750.1| aspartyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229511090|ref|ZP_04400569.1| aspartyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229518210|ref|ZP_04407654.1| aspartyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229608259|ref|YP_002878907.1| aspartyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254848293|ref|ZP_05237643.1| aspartyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255745577|ref|ZP_05419525.1| aspartyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262158349|ref|ZP_06029465.1| aspartyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|262170162|ref|ZP_06037850.1| aspartyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|298498730|ref|ZP_07008537.1| aspartyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|24212424|sp|Q9KSU0|SYD_VIBCH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|172047395|sp|A5F263|SYD_VIBC3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781761|sp|C3LLL2|SYD_VIBCM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|9655641|gb|AAF94325.1| aspartyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|126509582|gb|EAZ72176.1| aspartyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|146316098|gb|ABQ20637.1| aspartyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227009226|gb|ACP05438.1| aspartyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227013032|gb|ACP09242.1| aspartyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229344925|gb|EEO09899.1| aspartyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229351055|gb|EEO15996.1| aspartyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357463|gb|EEO22380.1| aspartyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229370914|gb|ACQ61337.1| aspartyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254843998|gb|EET22412.1| aspartyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255736652|gb|EET92049.1| aspartyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262021331|gb|EEY40044.1| aspartyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262029790|gb|EEY48438.1| aspartyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|297543063|gb|EFH79113.1| aspartyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 591

 Score =  629 bits (1622), Expect = e-178,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVD--LGDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLLKDVDFKVFSGPANDPKGRVAALCIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L     +AI  R   Q GD   F A             R    +E
Sbjct: 357 LAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LGI N + +   W++DFP +E +++E  +   H+PFT P          +     +  YD
Sbjct: 417 LGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +    K
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAVKLATK 588


>gi|323485941|ref|ZP_08091275.1| hypothetical protein HMPREF9474_03026 [Clostridium symbiosum
           WAL-14163]
 gi|323400755|gb|EGA93119.1| hypothetical protein HMPREF9474_03026 [Clostridium symbiosum
           WAL-14163]
          Length = 598

 Score =  629 bits (1622), Expect = e-178,   Method: Composition-based stats.
 Identities = 225/597 (37%), Positives = 346/597 (57%), Gaps = 11/597 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
            R+H C +L  +++G  V + GWV + R  GGIIF+D+RD  GI Q++          F 
Sbjct: 9   KRSHRCTELSTANIGETVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEESDCGAGSFA 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ + G V +RS   +N N+ TG+IE+ A  + +L+ AE  P P+      
Sbjct: 69  KAERLRSEFVVAVTGKVEARSG-AVNENLKTGEIEIRANSLRVLAEAETPPFPIEENSRT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  L +N++ R+R+    R  +  E F+E  TP L  S+PEGARD+
Sbjct: 128 KEELRLKYRYLDLRRPDLQRNLMIRSRVAILTRKFLAEEGFLEIETPTLIKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ  KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGEFYALPQSPQLLKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ +D+L+  E +L+ +F+E  + + +     R+ + +A+ R+G+DKPDLR  + + 
Sbjct: 247 LSFVDVEDVLDVNERLLKTLFKEICDYD-LQLPIQRMTWREAMERFGSDKPDLRFGMELK 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV++     +F VF   L             +G    R   D + E+A+  G  GLAY+ 
Sbjct: 306 NVSDTVKDCQFVVFKGALENGGSVRGINAEGQG-AMPRKKIDALVEYAKGFGAKGLAYLA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D     +     AK +     EA+   +D + GD   F A           + R  +
Sbjct: 365 IQEDG----SYKSSFAKFMTEEELEALVRAMDGKPGDLLLFAADKDKVVFDVLGNLRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L ++  + F F W+ +FP +E++EE+ +    H+PFTMP      L   D  +++A 
Sbjct: 421 ARQLDLLKKDDFRFLWVTEFPLFEYSEEDGRYVAVHHPFTMPMEEDLPLIDTDPGAVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H ++V  +    +G + E    +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTEMGGGSVRIHQADVQSKMLEVLGFTAERANEQFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G DR+VML++GA ++R+V  FP  ++   L+M +P+ V V+QL EL + +    +K
Sbjct: 541 YGFDRMVMLMVGADSIRDVIAFPKVKDASCLMMEAPAAVDVKQLEELSIAVAVAAEK 597


>gi|292488543|ref|YP_003531427.1| aspartyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899718|ref|YP_003539087.1| aspartyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291199566|emb|CBJ46683.1| aspartyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553974|emb|CBA21019.1| Aspartyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 595

 Score =  629 bits (1622), Expect = e-178,   Method: Composition-based stats.
 Identities = 229/593 (38%), Positives = 332/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG + +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F +A 
Sbjct: 2   RTEYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQEAFTLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N+ + TG+IE+ A ++ I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIRIVGTVRARDEKNKNSEMATGEIEVFATELTIINRSEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPDMANRLKARAKITSFVRRFMDDEGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +  + +  S  F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMERLVRNLWLDVKSVDLGS--FPIMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G   +R   D    +    G  GLAYI    
Sbjct: 297 DLLKDIEFKVFSGPANDAKGRVAALRVPGGAALSRKQIDDYTRFIEIYGAKGLAYIKVNQ 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R    DGD  FF A             R  + ++
Sbjct: 357 RAGGLEGITSPVAKFLNAGIVEAILQRTAAADGDLIFFGADRAKVVADALGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I N + +   W++DFP +E ++ E+ +   H+PFT P+        N   S  A  YD
Sbjct: 417 LKITNGSAWAPLWVVDFPMFE-DDGEQGLTAMHHPFTAPKDMSPEQLKNAPESAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GIS+     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGQMQQTVFGILGISEHEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G  N+R+V  FP +     L+  +P+  +   L ELG+ +VE  K
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPNFANPASLTELGIEVVEKSK 588


>gi|134096004|ref|YP_001101079.1| aspartyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166225350|sp|A4G8X1|SYD_HERAR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|133739907|emb|CAL62958.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Herminiimonas arsenicoxydans]
          Length = 599

 Score =  629 bits (1622), Expect = e-178,   Method: Composition-based stats.
 Identities = 226/594 (38%), Positives = 337/594 (56%), Gaps = 10/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG    + +   V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 2   RTQYCGLTSEALLDQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRVDVFKAAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +VR+E+ L I G+V  R   T N+N+ +G+IE+ A ++E+L+ +   P  +  +    E+
Sbjct: 62  AVRNEFCLRITGIVRHRPEGTTNSNLTSGKIEVLAHELEVLNPSVTPPFQLDDDNLS-ET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPQMQNNLRLRYKVTMEVRKFLDAQGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 181 SRVNAGHFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+   N   + N F  + Y  A+  YG+DKPD+R  +   ++T
Sbjct: 240 MNEQEIRDLFEGMIRLVFKNCLNVE-LPNPFPVMDYATAMGMYGSDKPDMRVKLEFTDLT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
                 EF+VFS   ++  G  V      GG   R+  D   ++    G  GLAYI    
Sbjct: 299 SIMKDVEFKVFSGAANMENGRVVGLRVPGGGAMPRSEIDAYTQFVAIYGAKGLAYIKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+++      I      QDGD  FF A             R  +   
Sbjct: 359 KAKGRDGLQSPIVKNIHDEALAKIIEATGAQDGDLIFFGADKAKVVNDAIGALRVKVGHS 418

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              ++ G+ + + +   W++DFP +E++E+ ++    H+PFT P+ G E L   +     
Sbjct: 419 DFGKKNGLFD-DEWRPLWVVDFPMFEYDEDSQRWSATHHPFTAPKDGHEDLMETNPGKCL 477

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG+E+  G +R H +EV  + F  + IS E  + +FG L  A Q G PPHGG
Sbjct: 478 SKAYDMVLNGWELGGGSVRIHRAEVQSKVFRALKISAEEAQLKFGFLLDALQYGAPPHGG 537

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +A G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+ 
Sbjct: 538 LAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSEVDEKQLRELHIRLR 591


>gi|223044122|ref|ZP_03614161.1| aspartyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442516|gb|EEE48622.1| aspartyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 588

 Score =  629 bits (1622), Expect = e-178,   Method: Composition-based stats.
 Identities = 234/592 (39%), Positives = 338/592 (57%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD      ++
Sbjct: 3   KRTTYCGLVTEDLLDEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALKV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ + G+V  R  ETIN  I TGQ+E+    IEI++ +E             
Sbjct: 63  AETVRSEYVVEVQGVVTKRDPETINPKIKTGQVEVQVSNIEIINKSETPPFAINEENVNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDDNGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D+++  E +LR V ++    + V   F R+ Y +A+ RYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVISMGEEMLRKVVKDVKGID-VEGPFPRMTYAEAMDRYGSDKPDTRFDMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV++     +F+VF   +      +            R   D + E+    G  GLA++ 
Sbjct: 301 NVSQLGKDMDFKVFKDTVENEGEIKAIVAEGAADQYTRKDMDSLTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+A+     N E ++     + GD   F+A  P          R  +
Sbjct: 361 VVED-----GLSGPIARFFEDANVETLKTLTGAKPGDLVMFVADKPSVVAQSLGALRIKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+ +   F W+ D+P  E++E+ K+   AH+PFT P+    S   ++  +++A 
Sbjct: 416 AKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKQEDISKLDSEPENVQAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G S E  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFSTEQAKEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLEELSLRIR 587


>gi|85859320|ref|YP_461522.1| aspartyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|97196498|sp|Q2LTE0|SYD2_SYNAS RecName: Full=Aspartyl-tRNA synthetase 2; AltName:
           Full=Aspartate--tRNA ligase 2; Short=AspRS 2
 gi|85722411|gb|ABC77354.1| aspartyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 591

 Score =  629 bits (1622), Expect = e-178,   Method: Composition-based stats.
 Identities = 243/592 (41%), Positives = 345/592 (58%), Gaps = 10/592 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           + RTH CG L  SD G  V L GWVHR R HGG+IF+D RD  G+ Q+V NP+      +
Sbjct: 8   KKRTHYCGQLDSSDSGKEVILMGWVHRRRDHGGVIFVDFRDREGLVQIVFNPEYSPVAHQ 67

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+VL + G V +R    +N ++ TG IE+  +++EIL+ ++  P  +  E + 
Sbjct: 68  EAHKIRSEYVLAVRGAVRNRPEGMVNPDMKTGAIEVMVEELEILNESQTPPFSLESESDI 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  + +NI+ R R+    R    +  FIE  TP LT S+PEGARD+
Sbjct: 128 SENIRLKYRYLDLRRPQIQRNIMLRNRVAAETRQFFQSNGFIEIETPFLTKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N+G+FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D+E
Sbjct: 188 LVPSRINKGTFYALPQSPQIFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDVE 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+ +DDI+  ME ++  +F    N    S  F R+ Y +AI RYG D PD+R  + + 
Sbjct: 247 MSFITEDDIIEIMEGLMTHLFSRCLNRTF-STPFPRLSYAEAIGRYGKDNPDIRFGLELR 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+    S   VF +  +     +   IP +G   +R   D +  +    G  GLA+  
Sbjct: 306 DLTDILADSGLTVFREAAAGGGMIKAIRIP-EGKRLSRKDLDDLQNFVSIYGARGLAWAR 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D         P+ K L       I  R++  +GD   F+A  P        + R H+
Sbjct: 365 VLAD-----GWTSPIFKFLTADEVRQINGRMEAVEGDVLVFVADTPTVVNDSLGNLRIHL 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +I+   F F WI +FP  E+++ EK+    H+PFT P          +   ++A 
Sbjct: 420 AKKLNLIDPEQFAFVWITEFPLMEFSDTEKRYVSTHHPFTSPVPDDVKYLPGEPGKVRAR 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H  E+    F  +G+  E V ++FG L  A + G PPHGGIA
Sbjct: 480 AYDLVLNGSEVGGGSIRIHRKEIQSLIFEALGLENEEVRSKFGFLLDALEFGTPPHGGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VM++ GA+++R+V  FP +Q    L+  +PS VS+EQL EL L+IV
Sbjct: 540 FGLDRLVMMMTGAESIRDVIAFPKTQKATCLMTDAPSRVSIEQLMELSLKIV 591


>gi|254187701|ref|ZP_04894213.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|157935381|gb|EDO91051.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
          Length = 600

 Score =  629 bits (1622), Expect = e-178,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 329/597 (55%), Gaps = 8/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+        +  F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKMTIGVELDAT-FPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   QDGD  FF A             R  I   
Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E+++EE +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVEAGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+ +  +
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|199599330|ref|ZP_03212728.1| Aspartyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|258508556|ref|YP_003171307.1| aspartyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|199589769|gb|EDY97877.1| Aspartyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|257148483|emb|CAR87456.1| Aspartyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259649863|dbj|BAI42025.1| aspartyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 601

 Score =  629 bits (1622), Expect = e-178,   Method: Composition-based stats.
 Identities = 221/603 (36%), Positives = 327/603 (54%), Gaps = 13/603 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT   GD+    +   V L GWV + R  G +IF+D+RD  GI Q+V +   D     +
Sbjct: 3   KRTCYAGDVNTDYLDQEVTLKGWVQKRRSLGSLIFIDLRDREGIVQLVFSEAIDRDALTV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A SVRSE+V+ + G+V  R  + +N  + TG IE+    I IL+ A+  P  +       
Sbjct: 63  ANSVRSEYVVEVQGVVKKRKPQAVNPEMKTGDIEVEVHDITILNKAKTPPFYIEDNVAVT 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  + KYR+LDLRR  + KNI  R  I+ S+   +    FI+  TP LTAS+PEGARD+L
Sbjct: 123 EETKLKYRYLDLRRPEMQKNIFTRAHIMRSVHHYLDDNGFIDVETPTLTASTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  GSFYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRVYPGSFYALPQSPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQP-EFTQIDLET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+  ++I +  E ++  V  +    + V   F RI + +A+ +YG+DKPDLR  + + +
Sbjct: 242 SFLSAEEIQDITEGLIAQVMHDVKGID-VDLPFQRITWQEAMDKYGSDKPDLRFDMQIQD 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V++    S+F+VF+  +          +P      +R   D   ++ +  G  GLA++  
Sbjct: 301 VSDLVKDSDFKVFAGAVQNGGQVRAIVLPGGAAKYSRKMIDAQQDYIKRFGAKGLAWLKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK        A+   +    GD   F+A             R H  
Sbjct: 361 TDD-----GISGPIAKFFGDG--AALTQAVGAHTGDLVLFVADKAKVVADALGYLRTHFG 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+   F FCW++D+P +E++E  ++   AH+PFTMP      L   D  +  A  
Sbjct: 414 HDLGLIDEKEFRFCWVVDWPLFEYDEGIQRWVPAHHPFTMPNEEDVHLLDTDPHAAHAQS 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  +    +G + E  +  FG L  A   G PPHGG+A 
Sbjct: 474 YDIVLNGYELGGGSIRIHNRDIQEKMLKALGFTPERAQKSFGFLLNALDYGFPPHGGLAI 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE--NPKKIL 599
           G+DR  MLL G  N+R+V  FP +    + +  +PS V+  QL++LG+ +    +P+K  
Sbjct: 534 GLDRFTMLLTGRDNIRDVIAFPKNSKASEPMTSAPSPVADIQLKDLGIEVRPDVDPEKEH 593

Query: 600 KIS 602
           +  
Sbjct: 594 EGD 596


>gi|134279807|ref|ZP_01766519.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|134249007|gb|EBA49089.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 305]
          Length = 600

 Score =  629 bits (1622), Expect = e-178,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 328/597 (54%), Gaps = 8/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R  F+        +  F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHTFKTTIGVELDAT-FPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   QDGD  FF A             R  I   
Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E+++EE +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVEAGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+ +  +
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|237747323|ref|ZP_04577803.1| aspartyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378674|gb|EEO28765.1| aspartyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 605

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 231/599 (38%), Positives = 340/599 (56%), Gaps = 14/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG    + +G  V L GWVHR R HGGIIF+D+RD  G+ Q+V +PD    F+IA+
Sbjct: 4   RTNYCGLTTEALLGQTVTLCGWVHRRRDHGGIIFIDMRDREGLVQIVCDPDRPDVFKIAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+ L + G V +R   T+N N+ +G IE+  + +E+L+ +   P  +  E    E+
Sbjct: 64  SIRNEYCLRVTGTVRARPEGTVNENLTSGHIEVFCETLEVLNPSVTPPFQLDDE-HLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  + A  FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQNNLRLRYKVAMEVRKYLDANGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D EMSF
Sbjct: 183 SRVNPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCEMSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ ++ +  EN++R +F    N   +   F  + ++ A+ RYG+DKPDLR  +    +T
Sbjct: 242 VEEQEVRDLFENMIREIFANTMNTE-LPKPFPVMTHEMAMARYGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIP----AKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           +   +  F+VFS   ++  G     +     A+G G  R+  D   ++    G  GLAYI
Sbjct: 301 DVMKNVPFKVFSNAANMPGGRVAALLVPGGSAEGSGMPRSEIDAYTQFVGIYGAKGLAYI 360

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G      P+ K+L       I  R   ++GD  FF A             RN 
Sbjct: 361 RVNDISKGAAGLQSPIVKNLTDEAIRQILERTGAKNGDLIFFGADKARIVNDALGALRNK 420

Query: 420 IA-----QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           I         G+   + ++  W++DFP +E++E + +    H+PFT P+ G E    +D 
Sbjct: 421 IGYSDFGHAHGLFEES-WKPLWVIDFPMFEYDEGDNRWVACHHPFTSPKDGHEDYLESDP 479

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
              +A  YD+V NG+E+  G IR H  EV  + F  + I       +FG L  A Q G P
Sbjct: 480 GRCRAKAYDMVLNGWELGGGSIRIHKEEVQSKVFRALKIGDGEAREKFGFLLDALQYGAP 539

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PHGG+A G+DR+V L+ G+ ++R+V  FP +Q    LL  +PSTVS +QL+EL +R+ +
Sbjct: 540 PHGGLAFGLDRLVTLMTGSDSIRDVIAFPKTQRAQCLLTHAPSTVSEKQLQELHIRLRK 598


>gi|254976334|ref|ZP_05272806.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255093719|ref|ZP_05323197.1| putative aspartyl-tRNA synthetase [Clostridium difficile CIP
           107932]
 gi|255315471|ref|ZP_05357054.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518134|ref|ZP_05385810.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255651250|ref|ZP_05398152.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260684314|ref|YP_003215599.1| putative aspartyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260687973|ref|YP_003219107.1| putative aspartyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306521094|ref|ZP_07407441.1| aspartyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|260210477|emb|CBA64949.1| putative aspartyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260213990|emb|CBE06101.1| putative aspartyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 595

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 216/597 (36%), Positives = 336/597 (56%), Gaps = 12/597 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEI 61
            RTH CG+L   ++   V L GWV + R  GG++F+D+RD  G+ Q+V +   D   FE 
Sbjct: 8   KRTHYCGELREKNINEEVVLMGWVQKKRNLGGLVFVDLRDTSGLCQIVFDTDVDKEAFEK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ + +E+V+ + G V  R ++  N N+ TG IE+ A ++ +L+ +E  P+ +  + +  
Sbjct: 68  AEKLGAEFVIAVKGKVCERQSK--NPNMPTGDIEIFATELRLLNKSETPPIYIKDDDDVS 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLR+ ++ +N+  R +++N  R  +    F E  TP L A +PEGARD+L
Sbjct: 126 EALRLKYRYLDLRKPSMQRNLKLRHKVMNITRNYLSNNRFCEIETPFLIAPTPEGARDYL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ YKQLLM SG DRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 186 VPSRVNPGKFYALPQSPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D+++ +E +L  +F+E  +   ++    ++ Y +A+ +YG+DKPD R    + +
Sbjct: 245 SFVEQEDVMSMIEGLLEAIFKEVLDVE-LALPLPKMTYAEAMSKYGSDKPDTRFGYELTD 303

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++   +  F+VF+             +  K     R     + E A++    GLA++  
Sbjct: 304 ISDVVCNCGFKVFADATQPGKSVRGINVKGKADDFTRKQISSLEEHAKTYRAKGLAWMKV 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+AK  N     AI  +++ + GD   F+A             R  +A
Sbjct: 364 -----GQEGVTSPIAKFFNEEEMNAILTKMNAEVGDLLLFVADKNSIVFDALGQVRLEVA 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480
             L +++ N +   W+ +FP +E +EE       H+PFT P       L+  D  S++A 
Sbjct: 419 NRLNLLDKNVYNLLWVTEFPVFEEDEETGTFSAMHHPFTSPMDEDLDKLEEGDKSSLRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R   S++  + F  +G ++E    +FG L  AF+ G PPH G+A
Sbjct: 479 AYDIVLNGYEIGGGSVRISNSDIQSRMFKALGFTEERANEKFGYLLEAFKYGTPPHAGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VMLL G  N+REV  FP +QN    +  +P+    EQL EL +++     +
Sbjct: 539 FGLDRLVMLLAGTDNIREVIAFPKNQNAVCPMTNAPTLAEDEQLEELSIKVDIKDNE 595


>gi|295675469|ref|YP_003603993.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295435312|gb|ADG14482.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 599

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 230/599 (38%), Positives = 332/599 (55%), Gaps = 8/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F+IA+
Sbjct: 4   RSEYCGLVTEELLGQSVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRADMFKIAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + G+V  R   T NA++ +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQVKGVVRGRPEGTTNASLKSGKIEVLCHELIVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+           F  + Y +A+RR+G+DKPDLR  +    +T
Sbjct: 242 LSEQEIRDLFEAMIRHVFKTTIGVQLDEK-FPVMEYAEAMRRFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMRDVDFKVFSTPANTKDGRVAALRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+    +AI  R   QDGD  FF A             R  I   
Sbjct: 361 AAKGRDGLQSPIVKNLHDDALKAIIERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N    + ++  W++DFP +E++EE+ +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R +  EV  + F  + I+ E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIYREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+     K 
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSEVDERQLRELHIRLRSPEPKA 599


>gi|217420222|ref|ZP_03451728.1| aspartate--tRNA ligase [Burkholderia pseudomallei 576]
 gi|217397526|gb|EEC37542.1| aspartate--tRNA ligase [Burkholderia pseudomallei 576]
          Length = 600

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 329/597 (55%), Gaps = 8/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+        +  F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKMTIGVELDAT-FPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   QDGD  FF A             R  I   
Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E+++EE +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVEAGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+ +  +
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|325132854|gb|EGC55533.1| aspartyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325138834|gb|EGC61385.1| aspartyl-tRNA synthetase [Neisseria meningitidis ES14902]
 gi|325203570|gb|ADY99023.1| aspartyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 602

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 233/607 (38%), Positives = 353/607 (58%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGTQNGDIIFFGADKTKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AAETKEA 602


>gi|291617759|ref|YP_003520501.1| AspS [Pantoea ananatis LMG 20103]
 gi|291152789|gb|ADD77373.1| AspS [Pantoea ananatis LMG 20103]
          Length = 592

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 219/597 (36%), Positives = 326/597 (54%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  + D    F++A 
Sbjct: 2   RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIAQVFFDADHQDAFQLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N+++ TG +E+ A  + I++ AE   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARDEKNRNSDMATGDVEVFAHALNIINRAEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMVERLKTRAKITSFVRRFMDDAGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R +++     +     F ++ + +A+ RYG+DKPDLRN + + +V 
Sbjct: 239 LTAPQVREIMERMIRELWQSVKGVDLGE--FPQMTFAEAMHRYGSDKPDLRNSMELVDVG 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DLLKTVEFQVFSGPANDEKGRVAALRVPGGAQLSRKQIDEYGKFVEIYGAKGLAWMKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    E +  R   QDGD  FF A             R  + ++
Sbjct: 357 RAKGLEGVQSPVAKFLNADIVETLLSRTSAQDGDIIFFGADRAKVVADALGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I +   +   W++DFP +E + +E  +   H+PFT P+         D     A  YD
Sbjct: 417 LQITDDKAWAPLWVVDFPMFEED-DEGGLAAMHHPFTAPKEMSAEQLAADPTQAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H   +    FS +GI +     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGNMQQTVFSILGIEEHEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+ MLL G  N+R+V  FP +     ++  +PS  +   L ELG+++V+  K   K
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACMMTEAPSEANPASLLELGIQVVKKDKPETK 592


>gi|118594331|ref|ZP_01551678.1| aspartyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118440109|gb|EAV46736.1| aspartyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 597

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 233/591 (39%), Positives = 349/591 (59%), Gaps = 5/591 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG+L    +   V L GW HR R HGG+IF+D+RD+ G+ Q+V +PD    F  A+
Sbjct: 2   RTHYCGELNRDHIDQEVILCGWAHRRRDHGGVIFIDLRDNKGLAQIVIDPDTKEAFSTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+VL +   V  R   T+N N+ TG++E+ A  +EIL+ +   P  +  +    ES
Sbjct: 62  SIRNEYVLKVTCKVRLRPEGTVNKNLPTGEVEMLASTVEILNASLTPPFMLDDDT-ITES 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR ++RF+DLRRD + KN+  R  I  ++R  +  E+FIE  TPILT S+PEGARD+LVP
Sbjct: 121 IRLEHRFIDLRRDQMQKNMKLRYDISKNIRQYLDHESFIEIETPILTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQ+LM SGFDRYFQIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHHGEFFALPQSPQLFKQILMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIEASF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+++DI++  EN+ R +F++  +  ++  +F R+ Y +A+ R+G+DKPDLR  + +  +T
Sbjct: 240 VDEEDIMSIAENMTREMFKKVMDQ-SLPQSFPRMTYQEAMHRFGSDKPDLRVTLELIELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E     +F+VFS   +++ G         G   +R+  D   E+ +  G  GLAYI    
Sbjct: 299 EEMKDVDFKVFSSAANMDNGRVAALRIPNGAELSRSEIDAYTEFVKIYGAKGLAYIKIND 358

Query: 364 DES-GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                      P+ K++++   +AI  +   ++GD  FF A             R  I  
Sbjct: 359 KNLLNEEGLQSPIVKNIHVDALKAIIEKTSAENGDLVFFGADKRTVVNEALGALREKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +   +    +   WI+DFP ++++EE  + +  H+PFT P+ G E L   D  +  +  Y
Sbjct: 419 DKKHLTNEPWAPVWIVDFPMFDFDEEGNRWNALHHPFTSPKDGHEGLLETDPGNCLSKAY 478

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H   V  + F  + IS E    +FG L  A Q G PPHGG+A G
Sbjct: 479 DMVINGWEVGGGSIRIHQQTVQSKVFKALNISDEEAREKFGFLLDALQYGAPPHGGLAFG 538

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DR+  LL GA ++R+V  FP +Q    L+  +P+ V  +QLREL +++  
Sbjct: 539 LDRLATLLAGADSIRDVIAFPKTQKAQCLMTQAPNMVDEKQLRELHIKVRP 589


>gi|325202727|gb|ADY98181.1| aspartyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325208723|gb|ADZ04175.1| aspartyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 602

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 232/607 (38%), Positives = 352/607 (57%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVD--LGDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGTKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGADKTKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AAETKEA 602


>gi|311109472|ref|YP_003982325.1| aspartyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310764161|gb|ADP19610.1| aspartyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 595

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 229/598 (38%), Positives = 338/598 (56%), Gaps = 9/598 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT   G +    +G  V L GWV+R R HGG+IF+D+RD  G+ Q+V +PD+A F  A+ 
Sbjct: 2   RTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRAGLAQIVFDPDNAAFATAER 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + GLV  R A T NA + +G+IE+  +++EIL+ +   P  +  +    E+ 
Sbjct: 62  LRNEFCVRVTGLVRERPAGTANAELASGEIEVLCKEVEILNASVTPPFQLDDDNLS-ETT 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  +R LDLRR  + +N++ R R+    R  +    FI+  TP+L  S+PEGARD+LVPS
Sbjct: 121 RLTHRVLDLRRPQMQRNLMLRYRVSIETRKFLDQLGFIDIETPMLAKSTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF+
Sbjct: 181 RVNAGHFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSFL 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            + +I    EN++R VF+     + +++ F  + + +A+RRYG+DKPDLR  +   ++T+
Sbjct: 240 NEFEIREIFENLIRHVFKVVQGVD-LASPFPIMPWTEAMRRYGSDKPDLRVKLEFTDMTD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                +F+VF+   +      V      G   +R+  D   ++    G  GLAYI     
Sbjct: 299 VMRDVDFKVFAAAATAPGSRVVALRVPGGAEMSRSEIDGYTQFVGIYGAKGLAYIKVNEV 358

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA--- 421
             G      P+ K+L+      +  R   QDGD  FF A             R  I    
Sbjct: 359 AKGREGLQSPIVKNLHDAALAELVKRTGAQDGDIIFFGADREKVVNDAIGALRVKIGHSE 418

Query: 422 --QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
             ++ G+     ++  W++DFP +E++EE+ +   AH+PFT P+ G E     D     A
Sbjct: 419 FGKKTGLFEAG-WQPLWVVDFPMFEYDEEDGRYTAAHHPFTSPKDGHEDFLETDPSKAFA 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I  E    +FG L  A Q G PPHGGI
Sbjct: 478 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAREKFGYLLDALQYGAPPHGGI 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DRIV ++ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+     K
Sbjct: 538 AFGLDRIVTMMTGAESIRDVIAFPKTQRAQDLLTQAPSEVDEKQLRELHIRLRNVEPK 595


>gi|110805810|ref|YP_689330.1| aspartyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|123048148|sp|Q0T3U0|SYD_SHIF8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110615358|gb|ABF04025.1| aspartate tRNA synthetase [Shigella flexneri 5 str. 8401]
          Length = 590

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 220/593 (37%), Positives = 329/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L+    EAI  R   QDGD  FF A +              + ++
Sbjct: 357 RAKGLEGINSPVAKFLSAEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 588


>gi|24113215|ref|NP_707725.1| aspartyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|46577188|sp|Q7UAE6|SYD_SHIFL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|24052211|gb|AAN43432.1| aspartate tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|281601281|gb|ADA74265.1| Aspartyl-tRNA synthetase [Shigella flexneri 2002017]
          Length = 590

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 221/593 (37%), Positives = 329/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +              + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP +E ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 588


>gi|319639099|ref|ZP_07993856.1| aspartyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317399677|gb|EFV80341.1| aspartyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 602

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 230/605 (38%), Positives = 345/605 (57%), Gaps = 12/605 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR T+ +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPTMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y + +  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALGVD--LGDFPRMPYSETMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYIKVND 357

Query: 364 DES----GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +     +     P+ K L+    + I  R   Q+GD  FF A             R  
Sbjct: 358 VSNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKAKVVNEAIGALRIK 417

Query: 420 IAQELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D  +
Sbjct: 418 VGLEHGKDNGYFVDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDPAN 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G PPH
Sbjct: 478 CLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+ +   
Sbjct: 538 GGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNVVDDKQLRELSLRLRQKAV 597

Query: 597 KILKI 601
           +  + 
Sbjct: 598 ETKEA 602


>gi|186683614|ref|YP_001866810.1| aspartyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|238691260|sp|B2J116|SYD_NOSP7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|186466066|gb|ACC81867.1| aspartyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 595

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 238/601 (39%), Positives = 352/601 (58%), Gaps = 17/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L    +G  V   GWV R R HGG++FLD+RD  GI Q+V++P      +E A
Sbjct: 2   RTHYCGELRKEHIGETVTFYGWVDRRRDHGGVVFLDLRDRSGIVQIVSDPQRTPDSYEQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
            ++R+E+V+ I G V  R  E++N  I TG++E+ A KI++L+         + V     
Sbjct: 62  NALRNEYVVEITGRVTQRPEESLNTRIPTGEVEIYADKIKLLNAVGKQLPFQVSVADTET 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRR+ + +N+  R +I+ +MR  +   E FIE  TPILT S+PEGAR
Sbjct: 122 VREDLRLKYRYLDLRRERMAQNLQLRHQIVKAMRRYLEDLEGFIEVETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+++PSRVN G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYVLPSRVNPGEWYALPQSPQLFKQLLMVSGLDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ Q++I+   E+++  +F+       +   FLR+ Y + + RYG+DKPD R  + 
Sbjct: 241 MEMSFMSQEEIIELNESLVCHIFKTVKGIE-LQRPFLRLTYAEGMERYGSDKPDTRYGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V++    S F+VF   ++     ++  IP      +         + + A   G  G
Sbjct: 300 LVDVSDIVKDSGFKVFRDTVTNGGIVKILPIPNGNDVISNVRIKPGGDLFKEASEAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI  R+ + G +  +G +  +L+    + I  R   + G    F AG+          
Sbjct: 360 LAYI--RVRDDGEIDTIGAIKDNLSEEQKQEILRRTGAKAGHLLLFGAGEAATVNKTLDR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  IA+E  +I+ +     WI DFP +EWN +EK+++  H+PFT P         +DL 
Sbjct: 418 LRQAIAREFNLIDPDKINLLWITDFPMFEWNADEKRLEALHHPFTAPHPDDL----SDLK 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NG E+  G +R +  E+  Q F  +G+S E  +++FG L  AF+ G PP
Sbjct: 474 TARAQAYDLVLNGVEVGGGSLRIYQREIQQQVFEAIGLSPEEAQSKFGFLLEAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +PS+V  +QL+EL +     P
Sbjct: 534 HGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQARCLLTDAPSSVDAKQLKELHVASTYKP 593

Query: 596 K 596
           K
Sbjct: 594 K 594


>gi|239817091|ref|YP_002946001.1| aspartyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|259511873|sp|C5CWX8|SYD_VARPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|239803668|gb|ACS20735.1| aspartyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 601

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 230/597 (38%), Positives = 343/597 (57%), Gaps = 14/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RTH CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD A  F +A+
Sbjct: 4   RTHYCGLVTEALMGQTVTLCGWVNRRRDHGGVIFIDVRDREGYVQVVCDPDRAATFAVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + GLV +R   T N  + +G+IE+   ++++L+ +   P  +  +    E+
Sbjct: 64  NLRNEFCVQVTGLVRARPEGTTNDQLKSGKIEVLCHELKVLNPSVTPPFLLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + +N++ R ++    R  + A  FI+  TP+L  S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPAMQRNMMLRYKVTMETRKFLDANGFIDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ GSF+ALPQ+PQ +KQLLM +G+DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRVHDGSFFALPQSPQLFKQLLMVAGYDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    E ++R VF   +  +     F  + Y DA+ +YG+DKPDLR  +    +T
Sbjct: 242 LAEEEIREMFEGMIRNVFRNAAGIDLPV--FPTMTYGDAMFKYGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG---GNRAFCDRMNEWARSQGQPGLAYIF 360
           E     EF+VFS   ++  G  V      GG     +R   D   E+ +  G  GLAYI 
Sbjct: 300 ELMKRVEFKVFSNAATMQGGRVVALRVPGGGAEGGLSRGEIDAYQEFVKIYGAKGLAYIK 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                +G      P+ K+L+  +   I  R   ++GD  FF A             R  I
Sbjct: 360 VNDAAAGREGLQSPIVKNLDDASLAEIIARTGARNGDILFFGADKEKIVNDAIGALRVKI 419

Query: 421 A-----QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
                 ++ G+ + + +   W++DFP +E++EE ++    H+PFT P+ G E L      
Sbjct: 420 GHSAFGKKSGLFD-DRWAPLWVVDFPMFEFDEEGQRWSAVHHPFTAPKDGHEDLMDTAPE 478

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              A  YD+V NG E+  G +R H  EV  + F  + IS E  + +FG L  A Q G PP
Sbjct: 479 KCIAKAYDMVLNGIEMGGGSVRIHREEVQSKVFRALKISAEDAQLKFGFLLDALQYGAPP 538

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           HGGIA G+DR+VML+ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+ 
Sbjct: 539 HGGIAIGLDRLVMLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLR 595


>gi|293398532|ref|ZP_06642710.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|291611003|gb|EFF40100.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 602

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 234/607 (38%), Positives = 355/607 (58%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +G  V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLGIAGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +++GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGADKAKVVNEAVGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQGKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AVETKEA 602


>gi|88705602|ref|ZP_01103312.1| Aspartyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88700115|gb|EAQ97224.1| Aspartyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 593

 Score =  629 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 225/595 (37%), Positives = 343/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H+CG L  +D+   V L GWV R R HGG+IFLD+RD  GI QVV +PD    F  A 
Sbjct: 2   RSHNCGLLRSADIDETVTLCGWVDRRRDHGGVIFLDLRDRDGIVQVVFDPDTEEHFATAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL + G V +RS  T+N ++ TG+IE+  ++IE+L+ A   P  +       E 
Sbjct: 62  RVRSEYVLKVTGRVRARSEATVNPSMPTGEIEVLGKEIEVLNTAATPPFQLDEHTSVGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR++DLRR  + + +  R+ + +++R  +  E F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLRYRYMDLRRPEMQQRLRLRSEVTDAVRRFLHGEGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHPGQFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++  I+   E ++RG+F+   + +     F  + + +A+ R+G+DKPDLR P+ + +V 
Sbjct: 241 MDEAGIMEITERMVRGLFKAVLDVDLPD--FPHMTWAEAMERFGSDKPDLRIPLELVSVD 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     +F+VF    + +P   V A+   GG   +R   D    +  + G  GLA+I   
Sbjct: 299 DLMQQVDFKVFRGP-ADDPLGRVAALKVPGGASISRKEIDDYTRYVGNYGARGLAWIKVN 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      P+ K +      ++  RL + +GD  FF A             R  +  
Sbjct: 358 DLAAGVEGLQSPILKFMPEDVVASMMERLGVANGDIVFFGADRAGIVNEALGALRIKVGS 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           + G++  + +   W++DFP +E ++ +      H+PFT P   + +L+ +      +  Y
Sbjct: 418 DQGLV-GDGWAPLWVVDFPMFE-DDGDGGWTPLHHPFTAPACDLATLREH-PGEALSRAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R H  E     F  +GI  E    +FG L  A + G PPHGG+A G
Sbjct: 475 DMVLNGTELGGGSVRIHNLETQEAVFDILGIDPEEAREKFGFLLDALKYGAPPHGGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DRIVML+ GA ++R+V  FP +Q    ++  +P TV   QLREL +R+ E  KK
Sbjct: 535 LDRIVMLMSGAASIRDVIAFPKTQTAACVMTEAPGTVGAAQLRELHIRLREQEKK 589


>gi|290893878|ref|ZP_06556856.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290556595|gb|EFD90131.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 591

 Score =  628 bits (1620), Expect = e-178,   Method: Composition-based stats.
 Identities = 226/597 (37%), Positives = 335/597 (56%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +    
Sbjct: 60  LEIADSVRNEFVVTIKGTVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +++I    E++L  V +E  N       F R+ Y +A+ R+G+DKPD+R  + 
Sbjct: 239 LETSFLTKEEIQAITEDMLVDVVKEAKNITI-DKPFPRMTYKEAMDRFGSDKPDIRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + NV++     +F+VF   +      +     +     +R   D +  +  + G  GLA+
Sbjct: 298 LQNVSDVAKDVDFKVFQSAIENGGEVKAINAKSAAANFSRKDLDALGVFVANYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E+G +   GP+AK         ++  L  +DGD   F A       +     RN
Sbjct: 358 LKV---EAGELK--GPIAKFFPEDKAAELKAALQAEDGDLLLFAADKADIVAASLGALRN 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++L +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + 
Sbjct: 413 KLGKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVM 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGG
Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTGESAKEQFGFLMDALEYGTPPHGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 533 IALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSAAQLAELKLETVKKE 589


>gi|167835473|ref|ZP_02462356.1| aspartyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 600

 Score =  628 bits (1620), Expect = e-178,   Method: Composition-based stats.
 Identities = 228/597 (38%), Positives = 331/597 (55%), Gaps = 8/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV SR   TINA + +G+IE+   ++++L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRSRPEGTINAGLTSGKIEVLCHELDVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+        +  F  + + +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIGVELAAT-FPVMPHSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  A+  R   +DGD  FF A             R  I   
Sbjct: 361 RAKGRDGLQSPIVKNLHDASIAAVLERTGAEDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E+++E+ +   AH+PFT P+         D     A
Sbjct: 421 EFGRANGLVEAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+ +  +
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|259908215|ref|YP_002648571.1| aspartyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224963837|emb|CAX55339.1| Aspartyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283478145|emb|CAY74061.1| aspS [Erwinia pyrifoliae DSM 12163]
          Length = 595

 Score =  628 bits (1620), Expect = e-178,   Method: Composition-based stats.
 Identities = 226/593 (38%), Positives = 331/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG + +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F+ A 
Sbjct: 2   RTEYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDHQQAFKQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N ++ TG+IE+ A ++ I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIRIVGTVRARDDKNKNGDMATGEIEVFATELTIINRSEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMANRLKARAKITSLVRRFMDDEGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +  + +     F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREIMERLVRNLWLDVKSVD--LGAFPSMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G G +R   D    +    G  GLAYI    
Sbjct: 297 DLLKDLEFKVFSGPANDAKGRVAALRVPGGAGLSRKQIDDYTRFIEIYGAKGLAYIKINE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    +AI  R    DGD  FF A             R  + ++
Sbjct: 357 RAKGLEGITSPVAKFLNADIVDAILQRTAALDGDLIFFGADRAKVVADALGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I N + +   W++DFP +E + EE  +   H+PFT P+        N   +  A  YD
Sbjct: 417 LKITNESAWAPLWVVDFPLFEDDGEEG-LTAMHHPFTAPKDMSPEQLKNAPETAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGQMQQTVFGILGITEHEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G  N+R+V  FP +     L+  +P+  +   L ELG+ +V+  K
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPNFANPASLTELGIEVVKKSK 588


>gi|220906397|ref|YP_002481708.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254781729|sp|B8HXQ8|SYD_CYAP4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219863008|gb|ACL43347.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 597

 Score =  628 bits (1620), Expect = e-178,   Method: Composition-based stats.
 Identities = 239/601 (39%), Positives = 356/601 (59%), Gaps = 17/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CGD+   DVG+ V L GWV R R HGG+IFLD+RD  G+ Q+V++P+     +  A
Sbjct: 2   RTHYCGDVRSHDVGTTVTLFGWVDRRRDHGGVIFLDLRDRSGVVQIVSDPERTPNSYAKA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP- 121
           + +R+E+V+ + G V +R  E++N  + TG++E+ A +IE+L+   +         E   
Sbjct: 62  EQLRNEYVVKVTGRVSARPEESLNPRLPTGEVEIYADQIELLNAVRKQLPFQVSTTESES 121

Query: 122 --ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRR+T+  N+  R +++ +MR  +   +NF+E  TP+LT S+PEGAR
Sbjct: 122 VREDLRLKYRYLDLRRETMAANLQLRHQVVKAMRRYLEDEQNFVEIETPVLTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G ++ALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGEWFALPQSPQLFKQLLMVAGYDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ Q++IL   E ++  +F++      +   F R+ Y +A+ RYG+DKPD R  + 
Sbjct: 241 MEMSFMSQEEILELNEALVCHIFKQVKGIE-LPRPFPRLTYAEAMDRYGSDKPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + NV++    S F+VFS  ++     +V  IP      +         + + A   G  G
Sbjct: 300 LVNVSDLMKDSGFKVFSGAVASGGLVKVLPIPNGNDLISNVRIKPGGDLFKEATDAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI  R+ E G +  +G +  +L       +  R   + G    F AG           
Sbjct: 360 LAYI--RVREGGEIDTIGAIKDNLTEAQKAELLQRTGAKPGHLLLFGAGTAAIVNKTLDR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  + +EL +I+       WI++FP +EWN +EK+++  H+PFT P          DL 
Sbjct: 418 LRQVLGRELNLIDPAKINLLWIVEFPMFEWNADEKRLEALHHPFTAPYPEDVQ----DLK 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NGFE+  G +R + +E+  Q F  +G+S E  +N+FG L  AF+ G PP
Sbjct: 474 TAQAQAYDLVYNGFEVGGGSLRIYQTELQKQVFETIGLSPEEAQNKFGFLLEAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +P+ V + QL+EL +     P
Sbjct: 534 HGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQARCLLTSAPAEVDLRQLKELHVASTSQP 593

Query: 596 K 596
           K
Sbjct: 594 K 594


>gi|294670692|ref|ZP_06735567.1| hypothetical protein NEIELOOT_02414 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307580|gb|EFE48823.1| hypothetical protein NEIELOOT_02414 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 602

 Score =  628 bits (1620), Expect = e-178,   Method: Composition-based stats.
 Identities = 230/605 (38%), Positives = 346/605 (57%), Gaps = 12/605 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NINEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFQDALGVD--LGDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYIKVND 357

Query: 364 DES----GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +     +     P+ K L+    + I  R   Q+GD  FF A             R  
Sbjct: 358 VSNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKAKVVNEAIGALRIK 417

Query: 420 IAQELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           +  E G  N    + ++  W++DFP +E++E+  +    H+PFT P+ G E L  +D  +
Sbjct: 418 VGLEHGAENGYFVDEWKPLWVVDFPMFEYDEDADRYVAVHHPFTAPKEGHEDLMVSDPAN 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G PPH
Sbjct: 478 CLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLRELGLR+ +   
Sbjct: 538 GGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNVVDDKQLRELGLRLRQKAT 597

Query: 597 KILKI 601
           +  + 
Sbjct: 598 ENKEA 602


>gi|312172686|emb|CBX80942.1| Aspartyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 595

 Score =  628 bits (1620), Expect = e-178,   Method: Composition-based stats.
 Identities = 228/596 (38%), Positives = 332/596 (55%), Gaps = 7/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG + +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F +A 
Sbjct: 2   RTEYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQEAFTLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N+ + TG+IE+ A ++ I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIRIVGTVRARDEKNKNSEMATGEIEVFATELTIINRSEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPDMANRLKARAKITSFVRRFMDDEGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +  + +     F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMERLVRNLWLDVKSVD--LGAFPIMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G   +R   D    +    G  GLAYI    
Sbjct: 297 DLLKDIEFKVFSGPANDAKGRVAALRVPGGAALSRKQIDDYTRFIEIYGAKGLAYIKVNQ 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R    DGD  FF A             R  + ++
Sbjct: 357 RAGGLEGITSPVAKFLNAGIVEAILQRTAAADGDLIFFGADRAKVVADALGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I N + +   W++DFP +E ++ E+ +   H+PFT P+        N   S  A  YD
Sbjct: 417 LKITNGSAWAPLWVVDFPMFE-DDGEQGLTAMHHPFTAPKDMSPEQLKNAPESAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GIS+     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGQMQQTVFGILGISEHEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           DR+VMLL G  N+R+V  FP +     L+  +P+  +   L ELG+ +V+  K  L
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPNFANPASLTELGIEVVKKSKDQL 591


>gi|188533627|ref|YP_001907424.1| aspartyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238691995|sp|B2VJ90|SYD_ERWT9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|188028669|emb|CAO96531.1| Aspartyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 595

 Score =  628 bits (1620), Expect = e-178,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 334/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG + +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F +A 
Sbjct: 2   RTEYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQEAFTLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N ++ TG+IE+ A ++ I++ +E   LP+       E 
Sbjct: 62  ELRNEFCIQIVGTVRARDEKNKNGDMATGEIEIFATELTIINRSEP--LPLDSNHINSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M  + F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPDMANRLKTRAKITSFVRRFMDDQGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++++  + +     F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMERLVRELWQDVKSVD--LGAFPSMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF+VFS   +   G         G   +R   D   ++  + G  GLAYI    
Sbjct: 297 DLLKNVEFKVFSGPANDVKGRVAALRVPGGAALSRKQIDDYAKFIETYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    E+I  R    DGD  FF A             R  + ++
Sbjct: 357 RAKGIEGITSPVAKFLNAEIVESILQRTAAADGDLIFFGADSAKVVADALGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I N + +   W++DFP +E ++ E  +   H+PFT P+        N   +  A  YD
Sbjct: 417 LNITNGSVWAPLWVLDFPMFE-DDGEDGLTAMHHPFTAPKEMSPEQLKNAPETAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGQMQQTVFGILGITEQEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G  N+R+V  FP +     L+  +P+  +   L ELG+ +V+  K
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPNFANPASLTELGIEVVKKAK 588


>gi|113970236|ref|YP_734029.1| aspartyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123130420|sp|Q0HIZ5|SYD_SHESM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|113884920|gb|ABI38972.1| aspartyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 591

 Score =  628 bits (1620), Expect = e-178,   Method: Composition-based stats.
 Identities = 219/593 (36%), Positives = 333/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + GLV +R    +NA + TG+IE+  +++ I++ +E LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGLVRARPNSQVNAQMKTGEIEVLGKELTIINSSEPLPLSLDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +++R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MTSEQVMAKTEEMMRGLFLEMLNVDLGE--FPRMTYNEAMRRFGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DLLKEVEFAVFSGPANDEEGRVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PV K LN      I  R   Q GD   F A +           R    ++
Sbjct: 359 LTQGLEGIQSPVLKFLNEDIVNEIISRTGAQTGDIILFGADNATVVAESMGALRLKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    +   W++DFP +E           H+PFT P+G        +  +  +  YD
Sbjct: 419 FNLL-EGQWRPLWVVDFPMFEKI--NGSFHAVHHPFTAPRGVTPQELEANPANRVSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  E+    F  +GI+ E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +V+  K
Sbjct: 536 DRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGISVVKAAK 588


>gi|325145003|gb|EGC67286.1| aspartyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 602

 Score =  628 bits (1620), Expect = e-178,   Method: Composition-based stats.
 Identities = 232/607 (38%), Positives = 353/607 (58%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKTKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    +L  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCMLTNAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 VAETKEA 602


>gi|310767870|gb|ADP12820.1| aspartyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 595

 Score =  628 bits (1620), Expect = e-178,   Method: Composition-based stats.
 Identities = 227/593 (38%), Positives = 331/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG + +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD    F+ A 
Sbjct: 2   RTEYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDHQQAFKQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N ++ TG+IE+ A ++ I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCIRIVGTVRARDDKNKNGDMATGEIEVFATELTIINRSEP--LPLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMANRLKVRAKITSLVRRFMDDEGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ +  + +     F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREIMERLVRNLWLDVKSVD--LGAFPSMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G G +R   D    +    G  GLAYI    
Sbjct: 297 DLLKDIEFKVFSGPANDAKGRVAALRVPGGAGLSRKQIDDYTRFIEIYGAKGLAYIKINE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    +AI  R    DGD  FF A             R  + ++
Sbjct: 357 RAKGLDGITSPVAKFLNADIVDAILQRTAALDGDLIFFGADRAKVVADALGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I N + +   W++DFP +E + EE  +   H+PFT P+        N   +  A  YD
Sbjct: 417 LKITNESAWAPLWVVDFPLFEDDGEEG-LTAMHHPFTAPKDMSPEQLKNAPETAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GIS+     +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGQMQQTVFGILGISEHEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G  N+R+V  FP +     L+  +P+  +   L ELG+ +V+  K
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPNFANPASLTELGIEVVKKSK 588


>gi|91781802|ref|YP_557008.1| aspartyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123359170|sp|Q145N3|SYD_BURXL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91685756|gb|ABE28956.1| aspartyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 599

 Score =  628 bits (1620), Expect = e-178,   Method: Composition-based stats.
 Identities = 233/599 (38%), Positives = 334/599 (55%), Gaps = 8/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 4   RSEYCGLVTEELLGQSVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L I G+V +R   T NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCLQIKGVVRARPEGTTNAALKSGKIEVLCHELIVLNPSITPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDAQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQIVKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+E          F  + Y +A+RR+G+DKPDLR  +   ++T
Sbjct: 242 LSEQEIRDLFEAMIRHVFKETIGVTLDEK-FPVMLYSEAMRRFGSDKPDLRVKLEFTDLT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAVRDVDFKVFSTPANTKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+    +AI  R   QDGD  FF A             R  I   
Sbjct: 361 VAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N    + ++  W++DFP +E++EE+ +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVESGWKPLWVIDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I+ E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+ +   K 
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSEVDERQLRELHIRLRQPEPKA 599


>gi|325579051|ref|ZP_08149007.1| aspartate--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159286|gb|EGC71420.1| aspartate--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 590

 Score =  628 bits (1620), Expect = e-178,   Method: Composition-based stats.
 Identities = 213/594 (35%), Positives = 334/594 (56%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  + +G  V LSGWVHR R  GG+IF+D+RD  G+ QV  +P        A 
Sbjct: 3   RTHYCGALNRNYIGQEVTLSGWVHRRRDLGGLIFIDMRDRDGVVQVCFDPKYQEALTAAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPDNQINKNMATGEVEVLAKELRIYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G+++     +     F ++ + +A+ R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAPEVREIMERMVHGLWQNIIGVD--LGKFPQMTWQEAMTRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVEFKVFNEPANNPNGRVAVIRVPNGTEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R+  Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPIAKFLNEEVWKALAERVKAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+         +     A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFTPEQLEANPTDAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGINEQEQHEKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V++ K+
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELSISVVKSEKE 590


>gi|307130883|ref|YP_003882899.1| aspartyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306528412|gb|ADM98342.1| aspartyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 596

 Score =  628 bits (1620), Expect = e-178,   Method: Composition-based stats.
 Identities = 223/599 (37%), Positives = 330/599 (55%), Gaps = 7/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F +A 
Sbjct: 2   RTEYCGLLNSSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFTLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    +N  + TG +E+ A  + I++ AE   LP+   +   E 
Sbjct: 62  ELRNEFCIQLTGVVRARPDNQVNKEMATGAVEVLATALTIINRAEP--LPLDANQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R RI + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRARITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEKLVRELWLEIHGVD--LGDFPIMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G   +R   D   ++    G  GLAYI    
Sbjct: 297 DLLKDVDFKVFSGPANDPKGRVAAIRVPGGAQLSRKQIDEYAKFIEIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G      PVAK LN     A+  R   +DGD  FF A             R  + ++
Sbjct: 357 KDNGLEGIQSPVAKFLNDGILSALLARTAAEDGDILFFGADSAKVVTDALGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I N N ++  W++DFP +E +  E  +   H+PFT P+    +    +  +  A  YD
Sbjct: 417 LKITNENSWQPLWVIDFPMFEED-GEGGLAAMHHPFTAPRDMSPTELEANPTAAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI +     +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHRGEMQQTVFRILGIDERQQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L EL + +V   K      
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPSALEELSIAVVGKGKAAQDAE 594


>gi|314933794|ref|ZP_07841159.1| aspartate--tRNA ligase [Staphylococcus caprae C87]
 gi|313653944|gb|EFS17701.1| aspartate--tRNA ligase [Staphylococcus caprae C87]
          Length = 588

 Score =  628 bits (1620), Expect = e-178,   Method: Composition-based stats.
 Identities = 232/592 (39%), Positives = 337/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD      ++
Sbjct: 3   KRTTYCGLVTEDLLDEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALKV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ + G+V  R  ETIN  I TGQ+E+    IEI++ +E             
Sbjct: 63  AETVRSEYVVEVQGVVTKRDPETINPKIKTGQVEVQVSNIEIINKSETPPFAINEENVNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDDNGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D+++  E +LR V ++    +   + F R+ Y +A+ RYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVISMGEEMLRKVVKDVKGIDVEES-FPRMTYAEAMDRYGSDKPDTRFDMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV++     +F+VF   +      +            R   D + E+    G  GLA++ 
Sbjct: 301 NVSQLGKDMDFKVFKDTVENEGEIKAIVAEGAADQYTRKDMDSLTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+A+     N   ++     + GD   F+A  P          R  +
Sbjct: 361 VVED-----GLSGPIARFFEDANVGTLKTLTGAKPGDLVMFVADKPSVVAQSLGALRIKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+ +   F W+ D+P  E++E+ K+   AH+PFT P+    S   ++  +++A 
Sbjct: 416 AKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKQEDISKLDSEPENVQAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G S E  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFSTEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLEELSLRIR 587


>gi|255656726|ref|ZP_05402135.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296452447|ref|ZP_06894148.1| aspartate--tRNA ligase [Clostridium difficile NAP08]
 gi|296877796|ref|ZP_06901822.1| aspartate--tRNA ligase [Clostridium difficile NAP07]
 gi|296258777|gb|EFH05671.1| aspartate--tRNA ligase [Clostridium difficile NAP08]
 gi|296431247|gb|EFH17068.1| aspartate--tRNA ligase [Clostridium difficile NAP07]
          Length = 595

 Score =  628 bits (1620), Expect = e-178,   Method: Composition-based stats.
 Identities = 219/597 (36%), Positives = 337/597 (56%), Gaps = 12/597 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEI 61
            RTH CG+L   ++   V L GWV + R  GG++F+D+RD  G+ Q+V +   D   FE 
Sbjct: 8   KRTHYCGELREKNINEEVVLMGWVQKKRNLGGLVFVDLRDTSGLCQIVFDTDVDKESFEK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ + +E+V+ + G V  R ++  N N+ TG IE+ A ++ +L+ +E  P+ +  + +  
Sbjct: 68  AEKLGAEFVIAVKGKVCERQSK--NPNMPTGDIEIFATELRLLNKSETPPIYIKDDDDVS 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLR+ ++ +N+  R +++N  R  +    F E  TP L A +PEGARD+L
Sbjct: 126 EALRLKYRYLDLRKPSMQRNLKLRHKVMNITRNYLSNNRFCEIETPFLIAPTPEGARDYL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ YKQLLM SG DRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 186 VPSRVNPGKFYALPQSPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D+++ +E +L  +F+E  +   ++    ++ Y +A+ RYG+DKPD R    + +
Sbjct: 245 SFVEQEDVMSMIEGLLEVIFKEVLDVE-LTLPLPKMTYAEAMSRYGSDKPDTRFGYELTD 303

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++   +  F+VF+             +  K     R     + E A++    GLA++  
Sbjct: 304 ISDVVCNCGFKVFADATQPGKSVRGINVKGKADDFTRKQISSLEEHAKTYRAKGLAWMKV 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+AK  +     AI  R++ + GD   F+A             R  +A
Sbjct: 364 -----GQEGVTSPIAKFFSEEEMNAILTRMNAEVGDLLLFVADKNSIVFDALGQVRLEVA 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAF 480
             L +++ N +   W+ +FP +E +EE       H+PFT P       L+  D  S++A 
Sbjct: 419 NRLNLLDKNVYNLLWVTEFPVFEEDEETGTFSAMHHPFTSPMDEDLDKLEEGDKASLRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R   S+V  + F  +G ++E    +FG L  AF+ G PPH G+A
Sbjct: 479 AYDIVLNGYEIGGGSVRISNSDVQSRMFKALGFTEERANEKFGYLLEAFKYGTPPHAGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VMLL GA N+REV  FP +QN    +  +P+    EQL EL +++     +
Sbjct: 539 FGLDRLVMLLAGADNIREVIAFPKNQNAVCPMTNAPTLAENEQLEELSIKVDIKDNE 595


>gi|153217299|ref|ZP_01951052.1| aspartyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|153826030|ref|ZP_01978697.1| aspartyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|254291590|ref|ZP_04962380.1| aspartyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|297578768|ref|ZP_06940696.1| aspartyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|124113681|gb|EAY32501.1| aspartyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|149740250|gb|EDM54397.1| aspartyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|150422542|gb|EDN14499.1| aspartyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|297536362|gb|EFH75195.1| aspartyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 591

 Score =  628 bits (1619), Expect = e-178,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVD--LGDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLLKDVDFKVFSGPANDPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L     +AI  R   Q GD   F A             R    +E
Sbjct: 357 LAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADTAKVVAEALGALRLKAGKE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LGI N + +   W++DFP +E +++E  +   H+PFT P          +     +  YD
Sbjct: 417 LGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +    K
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAVKLATK 588


>gi|255020118|ref|ZP_05292188.1| Aspartyl-tRNA(Asn) synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254970411|gb|EET27903.1| Aspartyl-tRNA(Asn) synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 596

 Score =  628 bits (1619), Expect = e-178,   Method: Composition-based stats.
 Identities = 237/590 (40%), Positives = 339/590 (57%), Gaps = 5/590 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH   + G   +GS + L GWV R R HGG+IFLD+RD  G+ Q+V +P     F +A+
Sbjct: 2   RTHYSNETGTELIGSEIILCGWVQRRRDHGGVIFLDLRDREGLIQIVVDPSQEEAFALAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL + G + +R A + N +I +G +EL A  IE+L+ +E LP P+  +    E+
Sbjct: 62  QVRSEYVLRVRGPLRARPAGSENPDIASGAVELQAVAIEVLNRSEPLPFPLDEDG-ISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  +   +  R ++   +R  +    F++  TPILT S+PEGARD+LVP
Sbjct: 121 LRLKYRYLDLRRPEMAGRLRLRHQVNRYLRRYLDERGFVDVETPILTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR   G F+ALPQ+PQ +KQLLM  G +RY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRTQPGHFFALPQSPQIFKQLLMVGGLERYYQITRCFRDEDLRADRQP-EFTQVDIEASF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++  ++   E ++RG+F E  + + + + F R+ Y +AIRRYG D+PDLRNP+ +  +T
Sbjct: 240 VDEAAVMAIAEPMIRGLFRELLDVD-LGDPFPRMPYAEAIRRYGVDRPDLRNPLELTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G         G   +R   D   E+A   G  GLA+I    
Sbjct: 299 DLARTVEFKVFRAAAELPQGRVACLRVPGGADLSRTQIDAYTEFAAIYGAKGLAWIKINA 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G+     P+ K L     + +  R   Q GD  FF A           + RN +A +
Sbjct: 359 LDGGSEGLQSPIVKFLPETFLQEMLQRSGAQVGDILFFGADRAKIVNETLGNLRNRVAAD 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G++    +   WI DFP +E++++E +    H+PFT PQ G   L  +      A  YD
Sbjct: 419 RGLL-EGGWRAVWITDFPMFEYDDQEDRWVSTHHPFTAPQEGSLGLLQSHPEKALARAYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG EI  G IR H  EV  Q F+ +GI  E   ++FG L  A   G PPHGG+A G+
Sbjct: 478 LVLNGNEIGGGSIRIHRREVQEQVFAALGIDPEEARDKFGFLLDALSYGAPPHGGLAFGL 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           DR+VML+ GA  +R+V  FP +Q    LL  +P+ V+  QLRELG+R+  
Sbjct: 538 DRLVMLMSGADTIRDVIAFPKTQKAGCLLTDAPNRVAERQLRELGIRLRP 587


>gi|293602542|ref|ZP_06684988.1| aspartate--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292819304|gb|EFF78339.1| aspartate--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 595

 Score =  628 bits (1619), Expect = e-178,   Method: Composition-based stats.
 Identities = 228/598 (38%), Positives = 339/598 (56%), Gaps = 9/598 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT   G +    +G  V L GWV+R R HGG+IF+D+RD  G+ Q+V +PD+A F  A+ 
Sbjct: 2   RTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRAGLAQIVFDPDNAAFATAER 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + GLV  R A T N+ + +G+IE+  +++EIL+ +   P  +  +    E+ 
Sbjct: 62  LRNEFCVRVTGLVRERPAGTANSELASGEIEVLCKEVEILNASVTPPFQLDDDNLS-ETT 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  +R LDLRR  + +N++ R R+    R  +    FI+  TP+L  S+PEGARD+LVPS
Sbjct: 121 RLTHRVLDLRRPQMQRNLMLRYRVSIETRKFLDQLGFIDIETPMLAKSTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF+
Sbjct: 181 RVNAGHFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSFL 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            + +I    EN++R VF+     + +++ F  + + +A+RRYG+DKPDLR  +   ++T+
Sbjct: 240 NEFEIREIFENLIRHVFKVVQGVD-LASPFPIMPWTEAMRRYGSDKPDLRVKLEFTDMTD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                +F+VF+   +      V      G   +R+  D   ++    G  GLAYI     
Sbjct: 299 VMRDVDFKVFAAAATAPGSRVVALRVPGGAEMSRSEIDGYTQFVGIYGAKGLAYIKVNEV 358

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA--- 421
             G      P+ K+L+      +  R   QDGD  FF A             R  I    
Sbjct: 359 AKGRDGLQSPIVKNLHDAALAELVKRTGAQDGDIIFFGADREKVVNDAIGALRVKIGHSE 418

Query: 422 --QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
             ++ G+     ++  W++DFP +E++EE+ +   AH+PFT P+ G E     D     A
Sbjct: 419 FGKKTGLFEAG-WQPLWVVDFPMFEYDEEDGRYTAAHHPFTSPKDGHEDFLETDPSKAFA 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 478 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQEKFGYLLVALQYGAPPHGGI 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DRIV ++ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+     K
Sbjct: 538 AFGLDRIVTMMTGAESIRDVIAFPKTQRAQDLLTQAPSEVDEKQLRELHIRLRNVETK 595


>gi|311069240|ref|YP_003974163.1| aspartyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310869757|gb|ADP33232.1| aspartyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 592

 Score =  628 bits (1619), Expect = e-177,   Method: Composition-based stats.
 Identities = 236/595 (39%), Positives = 340/595 (57%), Gaps = 10/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CGD+    +G  V+L GWV + R  GG+IF+D+RD  GI QVV NPD      EIA
Sbjct: 4   RTFYCGDITEKAIGETVKLKGWVQKRRDLGGLIFIDLRDRSGIVQVVFNPDASKEALEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP 121
           + +R+E+VL I G V++R   T+N N+ TG IE+ A ++ +LS A+  P  +  +  E  
Sbjct: 64  EGIRNEYVLDIQGTVVAREEGTVNKNLKTGAIEIHADEVAVLSAAKTPPFAISDQADEVS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R K+R+LDLRR  +   +  R  +  ++R  +    F++  TPILT SSPEGARD+L
Sbjct: 124 EDVRLKHRYLDLRRPAMFNTLQMRHNVTKAVRHFLDENGFLDIETPILTKSSPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 184 VPSRVHEGEFYALPQSPQLFKQLLMVSGVDRYYQIARCFRDEDLRADRQP-EFTQIDIEM 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q++I+   E+++  V  E      VS    R+ Y+DA+  YG+DKPD R  +++ +
Sbjct: 243 SFMSQEEIMALAEDMMAKVMRETKGVE-VSLPLPRMTYEDAMNLYGSDKPDTRFAMLLTD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V++    +EF+VFS  ++     +   +       +R   D +  +A + G  GLA++  
Sbjct: 302 VSDIVKDTEFKVFSSAVANGGVVKAINVKGAAADYSRKDIDALGAFAANYGAKGLAWVKV 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                      GP+AK  +      +   LD  DGD   F A             R  + 
Sbjct: 362 E-----QEGVKGPIAKFFDEEKQAKLIKSLDANDGDLLLFGADQFEVVAQSLGALRLKLG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +E G+I+ + F F W++D+P  E + EE +   AH+PFTMP      L      ++KA  
Sbjct: 417 KERGLIDESLFNFLWVIDWPLLEHDAEEGRFYAAHHPFTMPVREDLDLVDTAPENMKAQA 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+  G IR    E+  + F  +G +KE    +FG L  AF+ G PPHGGIA 
Sbjct: 477 YDLVLNGYELGGGSIRIFEKEIQEKMFKLLGFTKEEAHEQFGYLMEAFEFGAPPHGGIAL 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VMLL G  N+R+   FP + +   L+  +P  VS  QL EL L +    K
Sbjct: 537 GLDRLVMLLAGRTNLRDTIAFPKTASASCLMTDAPGEVSEAQLDELHLAVNRKVK 591


>gi|170691432|ref|ZP_02882597.1| aspartyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170143637|gb|EDT11800.1| aspartyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 599

 Score =  628 bits (1619), Expect = e-177,   Method: Composition-based stats.
 Identities = 234/599 (39%), Positives = 335/599 (55%), Gaps = 8/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 4   RSEYCGLVTEELLGQTVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L I G+V +R   T NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  DVRNEFCLQIKGVVRARPEGTTNAALKSGKIEVLCHELIVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDTLGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+E     ++   F  + Y +A+RR+G+DKPDLR  +   ++T
Sbjct: 242 LSEQEIRDLFEAMIRHVFKETIGV-SLDEKFPVMEYSEAMRRFGSDKPDLRVKLEFTDLT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAVKDVEFKVFSTPANSKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+    +AI  R   QDGD  FF A             R  I   
Sbjct: 361 VAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N    + ++  W++DFP +E++EE+ +   AH+PFT P+        +D     A
Sbjct: 421 EFGKANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLESDPARCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I+ E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+     K 
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSEVDERQLRELHIRLRTPEPKA 599


>gi|187922663|ref|YP_001894305.1| aspartyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|238689468|sp|B2SX42|SYD_BURPP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|187713857|gb|ACD15081.1| aspartyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 599

 Score =  628 bits (1619), Expect = e-177,   Method: Composition-based stats.
 Identities = 232/599 (38%), Positives = 332/599 (55%), Gaps = 8/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 4   RSQYCGLVTEELLGQSVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L I G+V  R   T NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCLQIKGVVRGRPEGTTNAALKSGKIEVLCHELIVLNPSITPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  + +  FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDSLGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQIVKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R VF+E          F  + Y +A+RR+G+DKPDLR  +   ++T
Sbjct: 242 LSEQEIRDLFEDMIRHVFKETIGVTLDEK-FPVMLYSEAMRRFGSDKPDLRVKLEFTDLT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAVRDVDFKVFSTPANTKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+    +AI  R   QDGD  FF A             R  I   
Sbjct: 361 VAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E++EE+ +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVETGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I+ E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+ +   K+
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSEVDERQLRELHIRLRQPEPKV 599


>gi|237756201|ref|ZP_04584766.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691630|gb|EEP60673.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 602

 Score =  628 bits (1619), Expect = e-177,   Method: Composition-based stats.
 Identities = 235/604 (38%), Positives = 360/604 (59%), Gaps = 17/604 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
              R + CGDL  S++G  VRL GWV  VR HGG+IF+++RD  GI QVV +P     E+
Sbjct: 7   EFKRDYYCGDLNESNIGDEVRLLGWVDTVRDHGGVIFINLRDREGIVQVVFDPSKIGEEL 66

Query: 62  ---AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
              AK ++SE+V+ + G V  R A T N  + TG IE++ +++ IL+ ++ LP P+    
Sbjct: 67  YNKAKKLKSEYVIGVRGRVNRRPAGTENPKMRTGNIEVAGEELLILNTSKALPFPIEDNI 126

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E +R KYR+LDLRR ++ +NI+ R  +  ++R  +    FIE  TP+LT S+PEGAR
Sbjct: 127 KVSEEVRLKYRYLDLRRPSMQRNIILRHEVYQAVREFLAGNGFIEVETPMLTKSTPEGAR 186

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR+ +G FYALPQ+PQ +KQ+LM +G +RYFQIA CFRDED R+DR P EF Q+D
Sbjct: 187 DFLVPSRLEKGKFYALPQSPQLFKQVLMVAGLERYFQIAKCFRDEDLRADRQP-EFTQID 245

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV +DD++   E++++ V+++    +     F R+ Y++AI +YGTDKPDLR  + 
Sbjct: 246 LEMSFVTEDDVMTLSESLIQYVYKKVLGIDI-KIPFRRMSYEEAINKYGTDKPDLRYGLE 304

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + ++T+     EF+VF+ +       +   I   G   +R   D + E+A+  G  G+A+
Sbjct: 305 LIDITDLAKEVEFKVFNDVAKSGGLVKGINIK-GGSKFSRKEIDELTEYAKKFGAKGMAW 363

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E+       P+ K       + +   +D +DGD   FIA             R 
Sbjct: 364 VKLENGEA-----TSPILKFFTEEQKQKLFSLMDAKDGDLLIFIADKKDITHKVLGFLRE 418

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL---- 474
           HIA+++ +I+ +  EF W++DFP +EW+EEE ++   H+PFT P+          L    
Sbjct: 419 HIAEKMNLIDNSKLEFLWVVDFPLFEWDEEENRLVAIHHPFTSPKDEDIDRLDEALNNPE 478

Query: 475 --LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
             LS K+  YD+V NG EI  G IR H   +  + F  + IS+E  + +FG L  A   G
Sbjct: 479 IALSFKSKAYDMVLNGEEIGGGSIRIHTPYIQEKVFQLLNISEEEAKEKFGFLIEALSYG 538

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG+A G+DRI+ L+ G++++R+V  FP +Q     L G+P  VS +QL+E+G+++ 
Sbjct: 539 APPHGGLAFGLDRILALMTGSESIRDVIAFPKTQKGICPLTGAPDYVSEKQLKEVGIKVE 598

Query: 593 ENPK 596
            + +
Sbjct: 599 ADEE 602


>gi|217964334|ref|YP_002350012.1| aspartyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|254781738|sp|B8DHM9|SYD_LISMH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|217333604|gb|ACK39398.1| aspartyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307571100|emb|CAR84279.1| aspS [Listeria monocytogenes L99]
          Length = 591

 Score =  628 bits (1619), Expect = e-177,   Method: Composition-based stats.
 Identities = 225/597 (37%), Positives = 332/597 (55%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +    
Sbjct: 60  LEIADSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNTSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +++I    E++L  V +E  N       F R+ Y +A+ R+G+DKPD+R  + 
Sbjct: 239 LETSFLTKEEIQAITEDMLVDVVKEAKNITI-DKPFPRMTYKEAMDRFGSDKPDIRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + NV++     +F+VF   +      +     +     +R   D +  +  + G  GLA+
Sbjct: 298 LQNVSDVVKDVDFKVFQSAIENGGEVKAINAKSAAANFSRKDLDALGVFVANYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E       GP+AK         ++  L  +DGD   F A       +     RN
Sbjct: 358 LKVEASE-----LKGPIAKFFPEDKAADLKAALQAEDGDLLLFAADKADIVAASLGALRN 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++L +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + 
Sbjct: 413 KLGKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVM 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGG
Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 533 IALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSAAQLAELKLETVKKE 589


>gi|153803294|ref|ZP_01957880.1| aspartyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124121174|gb|EAY39917.1| aspartyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 591

 Score =  628 bits (1619), Expect = e-177,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVD--LGDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLLKDVDFKVFSGPANDPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L     +AI  R   Q GD   F A             R    +E
Sbjct: 357 LAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LGI N + +   W++DFP +E +++E  +   H+PFT P          +     +  YD
Sbjct: 417 LGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +    K
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAVKLATK 588


>gi|307728452|ref|YP_003905676.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307582987|gb|ADN56385.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 599

 Score =  628 bits (1619), Expect = e-177,   Method: Composition-based stats.
 Identities = 235/599 (39%), Positives = 334/599 (55%), Gaps = 8/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 4   RSEYCGLVTEELLGQTVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L I G+V SR   T NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCLQIKGVVRSRPEGTTNAALKSGKIEVLCHELIVLNASITPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDTLGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+E      +   F  + Y +A+RR+G+DKPDLR  +   ++T
Sbjct: 242 LSEQEIRDLFEAMIRHVFKETIGVE-LDAKFPVMEYSEAMRRFGSDKPDLRVKLEFTDLT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DVVKDVEFKVFSTPANSKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+    +AI  R   QDGD  FF A             R  I   
Sbjct: 361 VAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N    + ++  W++DFP +E++EE+ +   AH+PFT P+        +D     A
Sbjct: 421 EFGKANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLESDPARCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I+ E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+     K 
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSEVDERQLRELHIRLRTPEPKA 599


>gi|317128224|ref|YP_004094506.1| aspartyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315473172|gb|ADU29775.1| aspartyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 596

 Score =  628 bits (1619), Expect = e-177,   Method: Composition-based stats.
 Identities = 226/597 (37%), Positives = 343/597 (57%), Gaps = 8/597 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
           + RTH CG++  S++G  V L GWV + R  G +IF+D+RD  G  Q+V N ++     +
Sbjct: 2   KKRTHLCGEVLESNIGEKVCLQGWVKKRRDLGQVIFVDLRDRSGHVQIVFNGENNKDALQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + VR+E+V+ + G V++R  ETIN  I TG+IE+   +IEIL+ ++ LP  +  + E 
Sbjct: 62  IGEKVRNEYVIEVCGTVVAREEETINDKIATGKIEVIVDEIEILNASKGLPFMIEDDVEI 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + + +  R R    +R  +    F+E  TP+LT S+PEGARD+
Sbjct: 122 SEDVRLKYRYLDLRRPKMFETMQLRNRTTKLIRDFLDENTFMEIETPMLTKSTPEGARDY 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGF+RY+Q+A CFRDED R+DR P EF Q+D+E
Sbjct: 182 LVPSRVHPGEFYALPQSPQLFKQLLMVSGFERYYQVARCFRDEDLRADRQP-EFTQIDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ ++++L  ME ++  + +E      V+  F R+ + +A+ R+G+DKPD R  + + 
Sbjct: 241 ASFLGKEELLAMMEQLMAKLLKELKGIT-VTTPFQRLTHSEAMNRFGSDKPDTRFGMELI 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++    S+F VF+  +      +   +       +R   D +  +    G  GLA++ 
Sbjct: 300 DVSKAVEDSDFGVFANTVKKGGVVKGICVKGIADQYSRKDLDNLTSFVSVYGAKGLAWLK 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                  N    GP+AK  N      +    D  +GD   F+A             R   
Sbjct: 360 VEE----NNTLKGPIAKFFNETEAATLCDAFDATNGDVLLFVADKQKVAWDALGALRLKF 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+E  +I+ + F F W+ DFP   ++E+EK+    H+PFT P              ++A 
Sbjct: 416 AKEHSLIDESKFNFLWVTDFPLLSYDEDEKRYVAEHHPFTRPINEDVEKLVTAPEEVRAE 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G  R +  E+  Q FS +G ++E  +++FG L  AF+ G PPHGGIA
Sbjct: 476 AYDLVLNGYELGGGSQRIYERELQEQMFSALGFTEEEAKSQFGFLLEAFEYGTPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VM+L G  N+RE   FP + +   LL  +PS+VS  QL EL L +VE  ++
Sbjct: 536 LGLDRLVMILAGRSNLRETIAFPKTASASCLLTNAPSSVSDAQLDELHLNVVEKKEE 592


>gi|15676377|ref|NP_273513.1| aspartyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|24212423|sp|Q9K0U5|SYD_NEIMB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|7225693|gb|AAF40903.1| aspartyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|316984745|gb|EFV63704.1| aspartyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325140886|gb|EGC63395.1| aspartyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325199651|gb|ADY95106.1| aspartyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 602

 Score =  628 bits (1619), Expect = e-177,   Method: Composition-based stats.
 Identities = 231/605 (38%), Positives = 349/605 (57%), Gaps = 12/605 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAEFSRKEIDEYTKFVGIYGAKGLAYIKVND 357

Query: 364 DES----GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +     +     P+ K+L+    + I  R   Q+GD  FF A             R  
Sbjct: 358 VSNLSNGEDSGLQSPIVKYLSENALKEIIARTGAQNGDIIFFGADKAKVVNEAIGALRIK 417

Query: 420 IAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D  +
Sbjct: 418 VGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDPAN 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G PPH
Sbjct: 478 CLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ +   
Sbjct: 538 GGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNSVDDKQLRELSLRLRQKAT 597

Query: 597 KILKI 601
           +  ++
Sbjct: 598 ETKEV 602


>gi|114047575|ref|YP_738125.1| aspartyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|123326530|sp|Q0HUY7|SYD_SHESR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|113889017|gb|ABI43068.1| aspartyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 591

 Score =  628 bits (1619), Expect = e-177,   Method: Composition-based stats.
 Identities = 218/593 (36%), Positives = 335/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G+V +R    +NA + TG+IE+  +++ I++ +E LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGVVRARPDSQVNAQMKTGEIEVLGKELTIINSSEPLPLSLDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +++R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MTSEQVMAKTEEMMRGLFLEMLNVDLGE--FPRMTYNEAMRRFGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DLLKNVEFAVFSGPANDEEGRVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PV K LN      I  R   Q GD   F A + +         R    ++
Sbjct: 359 LTQGLEGIQSPVLKFLNEGIVNEIISRTGAQTGDIILFGADNAIVVAESMGALRLKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    +   W++DFP +E           H+PFT P+G        +  +  +  YD
Sbjct: 419 FNLL-EGQWRPLWVVDFPMFEKI--NGSFHAVHHPFTAPRGVTPQELEANPANRVSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  E+    F  +GI+ E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +V+  K
Sbjct: 536 DRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGISVVKAAK 588


>gi|192360897|ref|YP_001981523.1| aspartyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|238692418|sp|B3PB55|SYD_CELJU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|190687062|gb|ACE84740.1| aspartyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 601

 Score =  628 bits (1619), Expect = e-177,   Method: Composition-based stats.
 Identities = 226/603 (37%), Positives = 334/603 (55%), Gaps = 10/603 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CG L  S +   V L GWV R R HGG+IF+D+RD  GI QVV +PD    F +A 
Sbjct: 2   RSQYCGALNASHINQEVTLCGWVDRRRDHGGVIFIDLRDREGIVQVVFDPDGKDNFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR E+VL + G V +R+A T+N N+ TG+IE+    + IL+ A+ +P P+       E 
Sbjct: 62  KVRGEYVLQVTGKVRARAAATVNPNMATGEIEVYGTALTILNEAQTIPFPLDSYANVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYRFLDLRR  +  N+  R ++ +++R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKYRFLDLRRTEMQNNLRFRGKVTSAIRNYLDRHGFLDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHDGKFFALPQSPQLFKQLLMVAGYDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + QD I+   E + R +F++  N          + + +AI +YG+DKPD+R P+ + ++ 
Sbjct: 241 MSQDQIMAVTEGMFRELFKDLMNIEFEE--IRHMPFSEAIAKYGSDKPDMRIPLELVDIK 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGG--GGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +     +F+VF+   + +P   V A+   GG     R   D   ++    G  GLAYI  
Sbjct: 299 DLVTDVDFKVFAGP-ANDPKARVTALKVPGGNEKLTRKQIDDYTKFVGIYGAKGLAYIKV 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                       P+ K+L +    AI  R+   +GD  FF A             R  + 
Sbjct: 358 NDKSDLEEGLQSPIVKNLPVPVRAAILERVGADNGDLIFFGADKHKVVTEALGALRCKLG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L +     +   W++DFP +E + ++      H+PFT P    E L  N   +  +  
Sbjct: 418 ADLNLYTA-QWAPLWVVDFPMFEED-DKGGWTSIHHPFTSPSCTPEELVAN-PGAALSRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G +R H   +    F  +GIS E    +FG L  A   G PPHGG+A 
Sbjct: 475 YDLVLNGVELGGGSVRIHSPAMQQAVFKILGISPEEQREKFGFLLDALSYGAPPHGGLAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKI 601
           G+DR+VML++GA ++R+V  FP +Q+   ++  +P TV   QLREL +R+    K+    
Sbjct: 535 GLDRLVMLMVGASSIRDVIAFPKTQSAACVMTDAPGTVDELQLRELHIRLRNQKKEQPAA 594

Query: 602 SVT 604
              
Sbjct: 595 DAP 597


>gi|157375167|ref|YP_001473767.1| aspartyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189082144|sp|A8FUW6|SYD_SHESH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157317541|gb|ABV36639.1| aspartyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 595

 Score =  628 bits (1619), Expect = e-177,   Method: Composition-based stats.
 Identities = 219/592 (36%), Positives = 334/592 (56%), Gaps = 6/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CGD+  S VG  V L GWV+R R  GG++FLD+RD  GI QVV +PD    F++A 
Sbjct: 2   RSQYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+ + + GLV +R    +N ++ TG+IE+  + + IL+ A  LP+ +   +   E 
Sbjct: 62  TLRSEFCVQVTGLVRARPDSQVNKDMRTGEIEILGKGLTILNSAAPLPINMDKNQHNTEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   IV R+++ +++R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMADRIVFRSKVTSAVRRFLDDSGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   +++   E + RG+F++  N +     F ++ + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MSSAEVMAKTEEMTRGLFKDLLNVDLGE--FPKMTFAEAMRRFGSDKPDLRNPLELIDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF +  +   G         G   +R   D   ++A   G  GLA++    
Sbjct: 299 DILKDVEFKVFQEPANDPAGRVAVLCIPGGAKLSRKQLDEYAKYATIYGAKGLAWMKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G      PV K LN      +  R + + GD   F A             R    ++
Sbjct: 359 LDKGLEGIQSPVLKFLNEDVVNGLLERTNAKTGDLILFGADKANIVAEAMGALRLKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++N   ++  W++DFP +E   +   +   H+PFT P G        D  +  +  YD
Sbjct: 419 FDLLN-GEWKPLWVVDFPMFEPTSD-GGLHAMHHPFTAPMGITPEQLEADPTAAISDAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H SE+    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVLNGCELGGGSVRIHNSEMQSAVFRILGIEEEEANEKFGFLLEALRYGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DRIVML+ GA ++R+V  FP +      L  +P   +  QL ELG+ ++E+ 
Sbjct: 537 DRIVMLMTGATSIRDVMAFPKTTTAACPLTNAPGFANPAQLVELGVNVIESE 588


>gi|119774978|ref|YP_927718.1| aspartyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166225425|sp|A1S6P2|SYD_SHEAM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119767478|gb|ABM00049.1| aspartyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 591

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 220/594 (37%), Positives = 333/594 (56%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG+IFLD+RD  G+ QVV +PD    F++A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVIFLDLRDREGLVQVVYDPDLPDVFDVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+ + + G+V  R    +N+ + TG+IE+  + + I++ A+ LPL +   +   E 
Sbjct: 62  SLRAEFCVQVKGVVRPRPDSQVNSQMKTGEIEVLGKALTIINAADPLPLSLDNHQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ + +R  M    F++  TPILT ++PEGARD+LVP
Sbjct: 122 ARLKYRYLDLRRPEMAQRLIFRAKVTSFVRRFMDGNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D ++ T E ++R +F E  N +    +F ++ +D+A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MTSDQVMETTERMIRNLFLELMNVD--LGDFPKMTWDEAMRRFGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DLLKAVEFAVFSGPANDEEGRVAALRIPGGAELSRKQIDDYTKFVGIYGARGLAWMKVNN 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN    + I  R    DGD  FF A             R    ++
Sbjct: 359 LAAGVEGIQSPVAKFLNEDIIKEIIARTKAADGDIIFFGADKANVVAESMGALRLKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    +   W++DFP +E  +   +    H+PFT P+G   +          +  YD
Sbjct: 419 FKLL-EGEWRPLWVVDFPMFEKAD--GRFYAVHHPFTAPRGVTAAELEASPGKAVSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  ++    F  +GI  E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGVELGGGSVRIHNGDMQSTVFRILGIDDEEAKEKFGFLLDALRFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+VML+ GA ++R+V  FP +      L  +P   + +QL ELG+ ++    K
Sbjct: 536 DRLVMLMTGASSIRDVMAFPKTTTAACPLTNAPGHANPDQLVELGIAVLPKEPK 589


>gi|317401441|gb|EFV82073.1| aspartyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 595

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 229/598 (38%), Positives = 336/598 (56%), Gaps = 9/598 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT   G +    +G  V L GWV+R R HGG+IF+D+RD  G+ Q+V +PD+A F  A+ 
Sbjct: 2   RTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRAGLAQIVFDPDNAAFATAER 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + GLV  R A T NA + +G+IE+  +++EIL+ +   P  +  +    E+ 
Sbjct: 62  LRNEFCIRVTGLVRERPAGTANAELASGEIEVLCKEVEILNASVTPPFQLDDDNLS-ETT 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  +R LDLRR  + +N++ R R+    R  +    FI+  TP+L  S+PEGARD+LVPS
Sbjct: 121 RLTHRVLDLRRPQMQRNLMLRYRVSIETRKFLDQLGFIDIETPMLAKSTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF+
Sbjct: 181 RVNAGHFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSFL 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            + +I    EN++R VF+     + ++  F  + + +A+RRYG+DKPDLR  +   ++T+
Sbjct: 240 NELEIREIFENMIRHVFKVVQGVD-LAEPFPIMTWTEAMRRYGSDKPDLRVQLEFTDMTD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                +F+VF+   +      V      G   +R+  D   ++    G  GLAYI     
Sbjct: 299 VMRDVDFKVFAAAATAPGSRVVALRVPGGAEMSRSEIDAYTQFVGIYGAKGLAYIKVNEV 358

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA--- 421
             G      P+ K+L+      +  R   QDGD  FF A             R  I    
Sbjct: 359 AKGRDGLQSPIVKNLHDAALAELVKRTGAQDGDIIFFGADREKVVNDAIGALRVKIGHSE 418

Query: 422 --QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
             ++ G+     +   W++DFP +E++EE+ +   AH+PFT P+ G E     D     A
Sbjct: 419 FGKKTGLFTAG-WMPLWVVDFPMFEYDEEDGRYTAAHHPFTSPKDGHEDFLETDPSKAFA 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I  E    +FG L  A Q G PPHGGI
Sbjct: 478 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAREKFGYLLDALQYGAPPHGGI 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DRIV ++ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+     K
Sbjct: 538 AFGLDRIVTMMTGAESIRDVIAFPKTQRAQDLLTQAPSEVDEKQLRELHIRLRNAEPK 595


>gi|323524741|ref|YP_004226894.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323381743|gb|ADX53834.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 599

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 234/599 (39%), Positives = 334/599 (55%), Gaps = 8/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 4   RSEYCGLVTEELLGQTVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L I G+V SR   T NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCLQIKGVVRSRPEGTTNAALKSGKIEVLCHELIVLNASITPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDTLGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+E      +   F  + Y +A+RR+G+DKPDLR  +   ++T
Sbjct: 242 LSEQEIRDLFEAMIRHVFKETIGVE-LDAKFPVMEYSEAMRRFGSDKPDLRVKLEFTDLT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAVKDVDFKVFSAPANTKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+    +AI  R   QDGD  FF A             R  I   
Sbjct: 361 VAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N    + ++  W++DFP +E++EE+ +   AH+PFT P+        +D     A
Sbjct: 421 EFGKANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLESDPARCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I+ E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+     K 
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSEVDERQLRELHIRLRAAEPKA 599


>gi|317151960|ref|YP_004120008.1| aspartyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942211|gb|ADU61262.1| aspartyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 607

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 239/594 (40%), Positives = 348/594 (58%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH   +L  +D+G  V L GWV   R HGG+IFLD+RD  G+TQVV NP+      E A
Sbjct: 24  RTHHNNELTAADLGKTVCLMGWVQFRRDHGGLIFLDLRDREGLTQVVFNPEGNQDVHERA 83

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++R+E+V+ I G V  R     N N++TG++E+  ++ ++L+ +E  P P+    E  E
Sbjct: 84  HAIRAEYVVAIKGRVRMRPEGMANKNLVTGEVEIEVEEYKLLNTSETPPFPIEDRVEVGE 143

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYRFLDLRR +L +N + R +   ++R  + A  F+E  TP+LT S+PEGARDFLV
Sbjct: 144 NLRLKYRFLDLRRPSLARNFIIRNKAAQAVRRYLDALGFLEIETPVLTKSTPEGARDFLV 203

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVNQG FYALPQ+PQ +KQ+LM SG DRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 204 PSRVNQGEFYALPQSPQLFKQMLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 262

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F ++  I +  E ++  +F E      + + F R+ Y+DA+R YG DKPDLR  +   ++
Sbjct: 263 FTDEAQIQDMAEGLVTKIFAETIGA-ALPDVFPRMTYNDAMRDYGVDKPDLRFGLKHIDI 321

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+ F +S F+VF+    V        +   GG  +R   D   ++    G  GLA+I  +
Sbjct: 322 TDAFRNSGFKVFASSELVK-----VMVVPGGGELSRKEIDDYTKFVEIYGSKGLAWIKVK 376

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D         P+ K  +      +R R D + GD  FF AG      +   + R  + +
Sbjct: 377 EDG----EWQSPIVKFFSEDEIATLRERTDCKPGDILFFQAGSADIANAALGNLRCELGE 432

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
             G+I+   F+  WI DFP  E+N +EK+    H+PFT  Q    +   +D  +  A  Y
Sbjct: 433 RFGLIDPKVFKPVWITDFPLLEYNPDEKRYVARHHPFTSAQPDQMATLASDPGNALARAY 492

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H +E     F+ +GI  +    +FG L  A + G PPHGGIA G
Sbjct: 493 DMVINGYEVGGGSIRIHTAEQQRIMFAALGIDGDEAREKFGFLMDALKFGAPPHGGIAFG 552

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR++M++ G+K++R+V  FP +Q    L+  +PS V  +QLRELG+R+ E  +
Sbjct: 553 LDRLIMIITGSKSIRDVIAFPKTQKATCLMTEAPSEVPSKQLRELGIRLREKKE 606


>gi|302036777|ref|YP_003797099.1| aspartyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|190343193|gb|ACE75581.1| aspartyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300604841|emb|CBK41174.1| Aspartyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 587

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 241/591 (40%), Positives = 356/591 (60%), Gaps = 11/591 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FE 60
           + RTH CG+L  + VG  V L+GWV R R HG ++F+D+RD  G+TQVV N +      E
Sbjct: 2   KIRTHRCGELTKAQVGQQVVLNGWVQRRRDHGMVLFIDLRDRTGLTQVVFNAERNAAVHE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A ++RSE V+ + G VM+R  E+ N N+ TG+IE+ A  +EIL+ A+  P  +  + E 
Sbjct: 62  AAHTLRSECVVSVTGQVMARPDESKNPNLPTGEIEVFADAVEILNEAKTPPFMIEDDIEI 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            ES+R KYR+LDLRR  + + +  R  I+ ++R  + AE F+E  TP+LT S+PEGARD+
Sbjct: 122 TESLRLKYRYLDLRRPRMQRLLGLRHGIMQAVRTFLNAEQFLEVETPVLTKSTPEGARDY 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRVN G FYALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 182 LVPSRVNPGMFYALPQSPQLFKQVLMVSGVDRYYQIARCFRDEDLRNDRQP-EFTQIDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+++ +++ ME ++  VF++ + G  +   F R+ Y DA+ RYG+DKPDLR  + +H
Sbjct: 241 MSFVDREQVMSLMERMIVSVFKD-AGGVQLPTPFPRMTYADAMGRYGSDKPDLRFDLPLH 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT     S+F+VF +  +     +   + + G    R+  D + E A+S G  GLA++ 
Sbjct: 300 DVTAFAAKSDFKVFKEAATKGGLVK-ALVVSGGASIARSRIDALGETAKSFGAKGLAWL- 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++   G +     +AK L            + + GD   F A  P          R  +
Sbjct: 358 -KITADGQLE--SVIAKFL--DAKAFAEALPEAKPGDLVLFGADKPAIVHDVLGRIRLLL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+   ++  W+ +FP  +++ EEK+  F HNPF  P          + L  +A 
Sbjct: 413 GEELNLIDKTAWKPLWVTEFPLLDYSPEEKRYIFMHNPFAAPMDEDLPFLDTEPLRARAK 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IRNH S++  +    +GI KE  + +FG L  A + G PPHGGIA
Sbjct: 473 AYDMVLNGSEIGGGSIRNHRSDIQFRILDLLGIGKEQAQAKFGFLLEALEYGAPPHGGIA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR++MLL GA ++R+V  FP +Q     L  +PS VS +QL+EL +++
Sbjct: 533 FGLDRLIMLLGGADSIRDVIAFPKTQRAQCPLTEAPSGVSADQLKELRIKL 583


>gi|269963127|ref|ZP_06177462.1| aspartyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269832091|gb|EEZ86215.1| aspartyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 592

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 222/597 (37%), Positives = 333/597 (55%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPESQVNKDMATGEVEILAKGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +  T E ++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVRATTEKMVREMWQELLNVDLGE--FPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   E+    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN      I  R   + GD   F A             R  + ++
Sbjct: 357 RAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     +   W++DFP +E + +E  +   H+PFT P G        +     +  YD
Sbjct: 417 LELTKEGTWAPLWVVDFPMFEED-DEGNLHAMHHPFTSPLGVTAEELKANPAVANSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K  +
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVTVAKEKDAE 592


>gi|296123536|ref|YP_003631314.1| aspartyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296015876|gb|ADG69115.1| aspartyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 589

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 224/596 (37%), Positives = 343/596 (57%), Gaps = 9/596 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
            YRT +CG+L +  VG    L GWV   R H G++F+D+RD YGITQVV   D+      
Sbjct: 1   MYRTKTCGELRIEHVGQVATLCGWVDSYRDHKGVVFIDLRDRYGITQVVFQADTPTDMQT 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA+ +RSE V+ + G V++R A   N  ++TGQ+E+  +++ +L+ ++  P     +   
Sbjct: 61  IARGLRSEDVIQVTGEVLARGAGLENPKLVTGQVEVRGRELTLLNKSKTPPFEPRTQDLP 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YR+LDLRR  + + I+ R ++  + R      NF+E  TPIL  S+PEGARD+
Sbjct: 121 NEELRMQYRYLDLRRPVVQQAIILRHKLAKATRDYFDRHNFLEIETPILGRSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++GSFYALPQ+PQ YKQ+LM +G+DRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRVHEGSFYALPQSPQLYKQILMVAGYDRYFQIARCFRDEDLRADRQP-EFTQIDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FV+QDDIL+T++ ++  + +E      +     R+ + + + +YG+DKPDLR  + + 
Sbjct: 240 MAFVKQDDILSTIDGLMAHLLKELRGEE-LPLPLPRLTHREVMEKYGSDKPDLRFGMELI 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + E   +  F VF   ++          P      +R   D + E+ +  G  GLA+  
Sbjct: 299 CLKEIAENCGFSVFKNTIANGNRVRGIVAPGAAEKYSRKQIDELTEFVKQYGAQGLAFFR 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +           P+AK  +  + + +  +L  + GD  F +A       +     RN +
Sbjct: 359 VK-----EEGLDSPIAKFFSAEDQQKLIAKLGARAGDLIFCVADTAKVSSAALGALRNRL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL + +    +  W++DFP ++W+E+E++    H+PF  P      +   D   ++A 
Sbjct: 414 AKELALYDPKEMKIAWVVDFPMFQWDEDEQRWVAEHHPFCQPHEEDIDILETDPGKVRAQ 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLVCNG+E ASG +R H   V  + FS +GI  E  E RFG L  A + G PPH G+A
Sbjct: 474 SYDLVCNGYEAASGSVRIHDPAVQQRIFSMMGIQPEEAELRFGFLLEALRYGAPPHAGVA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR  M+  G  N+R+V  FP +Q   DLL G+P+ V  +QLR+L +++    K
Sbjct: 534 LGLDRWSMMFSGTDNIRDVIAFPKNQKASDLLTGAPAPVDTKQLRDLRIKVDVPVK 589


>gi|167585481|ref|ZP_02377869.1| aspartyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 600

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 228/597 (38%), Positives = 331/597 (55%), Gaps = 8/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQVKGLVRNRPEGTVNAGLKSGKIEVLCHELTVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +    +  F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVELDAT-FPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVEFKVFSTPANAKDGRVAALRVPKGGELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   +DGD  FF A             R  I   
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E+++E+ +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVEAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+ +  +
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|153000827|ref|YP_001366508.1| aspartyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217973216|ref|YP_002357967.1| aspartyl-tRNA synthetase [Shewanella baltica OS223]
 gi|166225427|sp|A6WNQ6|SYD_SHEB8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781750|sp|B8EA71|SYD_SHEB2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|151365445|gb|ABS08445.1| aspartyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217498351|gb|ACK46544.1| aspartyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 592

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 220/594 (37%), Positives = 331/594 (55%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLIQVVYDPDLPEVFNVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + GLV +R    +N  + TG+IE+  Q + I++ A+ LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGLVRARPDSQVNGQMKTGEIEVLGQALTIINAADPLPLSMDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +S+R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLIFRAKVTSSVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + ++ 
Sbjct: 241 MSSEQVMAKTEEMMRGLFLEMLNVDLGE--FPRMTYNEAMRRFGSDKPDLRNPLELVDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DLLKEVEFAVFSGPANDEEGRVAALRIPGGAALSRKQIDDYTKFVGIYGAKGLAWMKIND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PV K LN      I  R   Q GD   F A             R    ++
Sbjct: 359 LSLGLEGIQSPVLKFLNESIVNEIVSRTGAQTGDIILFGADQATVVAESMGALRLKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    +   W++DFP +E           H+PFT P+G   +    +  +  +  YD
Sbjct: 419 FNLLQ-GEWRPLWVVDFPMFEKI--NGNFHAVHHPFTAPRGVTAAELEANPANRVSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  E+    F  +GI+ E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +VE   K
Sbjct: 536 DRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVEKAVK 589


>gi|225848649|ref|YP_002728812.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644107|gb|ACN99157.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 602

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 233/602 (38%), Positives = 356/602 (59%), Gaps = 17/602 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61
            R + CGDL   ++G  VRL GWV  VR HGG++F+++RD  GI QVV +P     E+  
Sbjct: 9   KRDYYCGDLNEGNIGEEVRLLGWVDTVRDHGGVLFINLRDREGIVQVVFDPSKISHEVYN 68

Query: 62  -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AK ++SE+V+ + G+V  R   T N+ + TG IE+ A  + IL+ +E LP  +    + 
Sbjct: 69  KAKKLKSEYVIGVKGIVSRRPVGTENSKMKTGNIEVLAHYLIILNTSEVLPFQIEDNIKV 128

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR ++ +NI+ R  +  ++R  ++   FIE  TP+LT S+PEGARDF
Sbjct: 129 SEEVRLKYRYLDLRRPSMQRNIILRHEVYQAVREFLVGNGFIEVETPMLTKSTPEGARDF 188

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+ +G FYALPQ+PQ +KQ+LM +G +RYFQI  CFRDED R+DR P EF Q+D+E
Sbjct: 189 LVPSRLEKGKFYALPQSPQLFKQILMVAGLERYFQIVKCFRDEDLRADRQP-EFTQIDLE 247

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV ++D+++  E +++ V+++    +     F R+ Y++AI +YGTDKPDLR  + + 
Sbjct: 248 MSFVSEEDVMSLSEALIQHVYKKVLGIDI-KIPFKRMSYEEAINKYGTDKPDLRYGLELI 306

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+  +  EF+VF+ +       +   +   G   +R   D + E+A+  G  G+A+I 
Sbjct: 307 DITDLALEVEFKVFNDVAKSGGLVKGINVK-GGAKFSRKEIDDLTEYAKKFGAKGMAWIK 365

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               E+       P+ K       + +  ++  QDGD   FIA             R H+
Sbjct: 366 LENGEA-----TSPILKFFTDDQKQRLFQKMQAQDGDLLVFIADKKEITHRVLGFLRKHL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL----- 475
           A++L +I+ N  EF W++DFP +EW+EEE ++   H+PFT P+          L      
Sbjct: 421 AEKLNLIDKNKLEFLWVVDFPLFEWDEEENRLVAIHHPFTSPKDEDIEKLDQALENPEIA 480

Query: 476 -SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S K+  YD+V NG EI  G IR H   +  + F  + IS+E  + +FG L  A   G P
Sbjct: 481 LSFKSKAYDMVLNGEEIGGGSIRIHTPYLQQKIFKLLNISEEEAKEKFGFLIEALSYGAP 540

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DRI+ L+ G++++R+V  FP +Q     L G+P  V  +QL+ELG++I E 
Sbjct: 541 PHGGLAFGLDRILALMTGSESIRDVIAFPKTQKGVCPLTGAPDYVEEKQLKELGIKIEEE 600

Query: 595 PK 596
            +
Sbjct: 601 EE 602


>gi|296160991|ref|ZP_06843802.1| aspartyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295888690|gb|EFG68497.1| aspartyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 599

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 233/599 (38%), Positives = 334/599 (55%), Gaps = 8/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 4   RSEYCGLVTEELLGQSVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L I G+V +R   T NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCLQIKGVVRARPEGTTNAALKSGKIEVLCHELIVLNPSITPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDAQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRTNPGQFFALPQSPQLFKQLLMVANFDRYYQIVKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+E          F  + Y +A+RR+G+DKPDLR  +   ++T
Sbjct: 242 LSEQEIRDLFEAMIRHVFKETIGVTLDEK-FPVMLYSEAMRRFGSDKPDLRVKLEFTDLT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAVRDVDFKVFSTPANTKDGRVAAIRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+    +AI  R   QDGD  FF A             R  I   
Sbjct: 361 VAKGRDGLQSPIVKNLHDEAVKAIIERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E++EE+ +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVETGWKPLWVIDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I+ E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKINAEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+ +   K+
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSEVDERQLRELHIRLRQPEPKV 599


>gi|52424763|ref|YP_087900.1| aspartyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|62287543|sp|Q65UP5|SYD_MANSM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|52306815|gb|AAU37315.1| AspS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 590

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 215/594 (36%), Positives = 328/594 (55%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L   ++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RSHYCGGLNRENIGQEVTLSGWVHRRRDLGGLIFIDMRDREGIVQVCFDPKYQQALTRAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+ + I G V++R    IN N+ TG++E+ A+++ + + A+   LP+   +   E 
Sbjct: 63  SLRNEFCIQIKGEVIARPDNQINKNMATGEVEVLAKELSVYNAAD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++   +  N     F  + + +A++R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAPEVREIMEKMIHGLW--LNTINVDLGKFPVMTWTEAMQRFGSDKPDLRNPLEITDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D   ++    G  GLA++    
Sbjct: 298 DIVKDVDFKVFSGPANDPNGRVAVIRVPNGASVTRKQIDEYTQFVGIYGAKGLAWLKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L     +AI  R   Q GD  FF A             R  + ++
Sbjct: 358 VNAGLEGVQSPIAKFLTEEKIKAIFDRTSAQTGDILFFGADKWQTATDALGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   + +   W++DFP +E +EE   +   H+PFT P+         D     A  YD
Sbjct: 418 LALTQLDQWAPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFSPEQLEADPTGAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI ++    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEQQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+ MLL G  N+R+V  FP +     L+  +PS  + + L EL + +V+  K+
Sbjct: 537 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPQALEELSISVVKTDKE 590


>gi|260768190|ref|ZP_05877124.1| aspartyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260616220|gb|EEX41405.1| aspartyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|315179891|gb|ADT86805.1| aspartyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 591

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 219/595 (36%), Positives = 330/595 (55%), Gaps = 7/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD +  FE+A 
Sbjct: 2   RSHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADVFEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R    +N ++ TG+IE+ A+ ++I++ ++   LP+   ++  E 
Sbjct: 62  QLRNEFCIKLTGEVHARPDSQVNKDMATGEIEVLAKGLQIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVRAVTEKMIREMWLELLNVD--LGDFPVMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G   +R   D    +    G  GLA++    
Sbjct: 297 DLLKEVDFKVFSGPANDEKGRVAALRVPGGAALSRKQIDEYTAFVAIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN     AI  R   Q GD   F A             R  + +E
Sbjct: 357 LAAGMEGIQSPVAKFLNETIVSAILERTGAQTGDIILFGADKANVVSEALGALRLKVGKE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I N + +   W++DFP +E +++E  +   H+PFT P          +     +  YD
Sbjct: 417 LNITNESTWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNMSPEELKANPEGALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H + +    F  +GI     + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHDATMQAAVFDLLGIDAAEQQLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K 
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALDELAIAVTAAKEKA 590


>gi|238028612|ref|YP_002912843.1| aspartyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237877806|gb|ACR30139.1| Aspartyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 599

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 229/599 (38%), Positives = 331/599 (55%), Gaps = 8/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRGRPDGTINAGLKSGKIEVLCHELTVLNPSVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEVRKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF +       +  F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEEMIRHVFHKTIGVELGAK-FPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG   R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSAPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   QDGD  FF A             R  I   
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N    + ++  W++DFP +E+++E+ +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVESGWKPLWVIDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R    +V  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIFQEDVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           A G+DRI+ ++ GA ++R+V  FP +Q   DLL  +PS V   QL+EL +R+ +  +K 
Sbjct: 541 AFGLDRIITMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLKELHIRLRQPEQKA 599


>gi|295695735|ref|YP_003588973.1| aspartyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295411337|gb|ADG05829.1| aspartyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 598

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 241/588 (40%), Positives = 341/588 (57%), Gaps = 10/588 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG L  SD+G  V LSGWV R R  GG+IFLD+RD  GI QVV++ +   A F +A
Sbjct: 11  RTAMCGRLTESDIGREVVLSGWVQRRRDLGGVIFLDLRDRSGIVQVVSSQEFGEAAFAVA 70

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR+E+V+ + G V++R  ET+N N+ TG IE+ A+++E+L+ ++  P P+    +  E
Sbjct: 71  DLVRNEYVISVRGDVVARDPETVNPNLETGTIEVRAREVELLNRSKPTPFPIEDGIDVDE 130

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R ++R+LDLRR  + +  + R R +  +R  +    F+E  TP+LT  +PEGARD+LV
Sbjct: 131 SVRLRFRYLDLRRPEMQRTFLLRHRAMQQVRRFLDLHGFMEIETPMLTRRTPEGARDYLV 190

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SGF+RYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 191 PSRVHPGQFYALPQSPQLFKQLLMVSGFERYFQIVRCFRDEDLRADRQP-EFTQIDIEMS 249

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+   +    ME ++  +F+E      V   F RI YD+A+ RYG+DKPDLR  + + +V
Sbjct: 250 FMPLTEFQELMERMMAELFQELLGVT-VPLPFRRIPYDEAMLRYGSDKPDLRFGLEIRDV 308

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE      FRVF   ++             GG  +R   D +   A   G  GLA++   
Sbjct: 309 TEMVKTCGFRVFQSAVNSGGAVRGLNAKGCGG-FSRKEIDDLGALAGQLGAKGLAWMVIT 367

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                      P+AK        AIR  L  + GD   F+A  P          R H+ +
Sbjct: 368 -----EEGVKSPIAKFFTDEELGAIRRELGAEVGDLLLFVADRPEICAEVLGQLRLHLGR 422

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            LG+I+   F F WI DFP + ++EEEK+    H+PFTMP+     L   D   ++A  Y
Sbjct: 423 RLGLIDDASFAFAWITDFPLFSYDEEEKRWVAEHHPFTMPRWEDVDLMERDPARVRAQAY 482

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+EI  G +R +  ++    F  +G S +    +FG L  AF+ G PPHGG+A G
Sbjct: 483 DMVLNGYEIGGGSLRIYRRDIQEAMFRTLGFSMDEAREKFGFLLEAFEYGAPPHGGMAFG 542

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            DR++ML+ G  ++RE   FP + +   LL G+PS +S EQ REL +R
Sbjct: 543 FDRVIMLMAGKSSIRECIAFPKTASASCLLTGAPSQISDEQWRELHIR 590


>gi|294085457|ref|YP_003552217.1| aspartyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665032|gb|ADE40133.1| aspartyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 590

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 304/597 (50%), Positives = 398/597 (66%), Gaps = 9/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C  L  + VG  VR+SGW++R R HG ++F+D+RDHYG+TQ VA+   A F 
Sbjct: 1   MHIYRTHTCAALTEAAVGEKVRISGWINRKRDHGQLVFIDVRDHYGLTQCVADSSDASFA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I ++ R E V+ I G V+ RS +TIN  + TG IE+  +  E+ S A+ LPL V  + + 
Sbjct: 61  IVEATRLESVVTITGEVVRRSDDTINTALPTGHIEVRIESFEVQSAADTLPLQVNSDEDS 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR+LDLRR   H NI+ R +II S+R RM+ + F E  TPILTASSPEGARDF
Sbjct: 121 GEETRLRYRYLDLRRSRPHANIMLRAQIIQSIRARMVDQGFTEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQAPQQ+KQL+M SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPARLHPGKFYALPQAPQQFKQLIMVSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ N +E V+RGVFEEFS+ +   + ++ I + +++ +YG DKPDLR P  + 
Sbjct: 241 MSFVEQQDVFNAVEPVIRGVFEEFSDKDCGED-WVHIPFAESMLKYGNDKPDLRIPFEIS 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VTE F  S F +F+K +           P  G   +RA  DRMN WA+ +G PG+ YI 
Sbjct: 300 DVTEIFRDSGFSIFAKNIEKGAVVRAVPGPKCG---SRAIADRMNSWAQGEGAPGMGYII 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +     G     GPVAK L     E IRV++  +DGD+ FF   +P    S A  AR  I
Sbjct: 357 Y-----GEGEARGPVAKALGAEKAEEIRVQVGAEDGDAVFFACAEPDAAASLAGRARVKI 411

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            Q+  +I+ + F F WI+DFP +E +E   KIDF+HNPF+MPQGGM++L   + L IKA+
Sbjct: 412 GQDQKLIDESVFRFAWIVDFPMFEKDEVTGKIDFSHNPFSMPQGGMQALLEMNPLDIKAW 471

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG E++SG IRNH+ EVM +AF   G    VV+++F  +  AF+ G PPHGGIA
Sbjct: 472 QYDLVCNGVELSSGAIRNHLPEVMYKAFEIAGYDNSVVDDKFPAMINAFRFGAPPHGGIA 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDR+VML+    N+REV LFPM+    DL+M +PS V    L EL +R    PKK
Sbjct: 532 PGIDRMVMLIADEPNIREVILFPMNGKAEDLMMAAPSEVDDAALNELHIRRAPVPKK 588


>gi|117920398|ref|YP_869590.1| aspartyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166225430|sp|A0KWL5|SYD_SHESA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|117612730|gb|ABK48184.1| aspartyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 591

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 218/593 (36%), Positives = 333/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G+V +R    +NA + TG+IE+  +++ I++ +E LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGVVRARPDSQVNAQMKTGEIEVLGKELTIINSSEPLPLSLDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +++R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MTSEQVMAKTEEMMRGLFLEMLNVDLGE--FPRMTYNEAMRRFGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DLLKEVEFAVFSGPANDEEGRVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PV K LN      I  R   Q GD   F A +           R    ++
Sbjct: 359 LTQGLEGIQSPVLKFLNEGIVNEIISRTGAQTGDIILFGADNATVVAESMGALRLKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    +   W++DFP +E           H+PFT P+G        +  +  +  YD
Sbjct: 419 FNLL-EGQWRPLWVVDFPMFEKI--NGSFHAVHHPFTAPRGVTPQELEANPANRVSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  E+    F  +GI+ E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +V+  K
Sbjct: 536 DRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGISVVKAAK 588


>gi|24373980|ref|NP_718023.1| aspartyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|38372526|sp|Q8EEE9|SYD_SHEON RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|24348431|gb|AAN55467.1|AE015684_4 aspartyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 591

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 219/593 (36%), Positives = 332/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G+V +R    +NA + TG+IE+  + + I++ +E LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGVVRARPDSQVNAQMKTGEIEVLGKALTIINSSEPLPLSLDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +++R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++N  E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MTSEQVMNKTEEMMRGLFLEMLNVDLGE--FPRMTYNEAMRRFGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DLLKDVEFAVFSGPANDEEGRVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PV K LN      I  R   Q GD   F A             R    ++
Sbjct: 359 LTQGLEGIQSPVLKFLNENIVNEIINRTGAQTGDIILFGADQATVVAESMGALRLKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    +   W++DFP +E           H+PFT P+G        +  +  +  YD
Sbjct: 419 FNLL-EGQWRPLWVVDFPMFEKI--NGSFHAVHHPFTAPRGVTPQELEANPANRVSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  E+    F  +GI+ E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +V+  K
Sbjct: 536 DRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVKTAK 588


>gi|226941365|ref|YP_002796439.1| aspartyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|254781737|sp|C1DB91|SYD_LARHH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226716292|gb|ACO75430.1| Syd [Laribacter hongkongensis HLHK9]
          Length = 603

 Score =  627 bits (1618), Expect = e-177,   Method: Composition-based stats.
 Identities = 235/599 (39%), Positives = 339/599 (56%), Gaps = 12/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +   V + GWVHR R HGG+IF+D+RD  G+ QVV +PD+   F  A 
Sbjct: 2   RTDYCGLIDTRYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGLVQVVIDPDTPEAFATAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V  R   T NA +I+G+IEL A++IEIL+ A   P  +  E    E+
Sbjct: 62  SARNEFVLSITGRVRRRPEGTTNAKMISGEIELLAKEIEILNAAATPPFQIDDENLS-ET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + KN+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPAMQKNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQIVKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +DDI++  E + R VF +    +    +F R+ Y DA+  YG+DKPDLR  +    +T
Sbjct: 240 LNEDDIMDITEGMARQVFHD--AMDVELGDFPRMTYADAMHYYGSDKPDLRVSLKFAELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW-- 361
           +      F+VF+   ++  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DVMKDVPFKVFNAAANLPNGRVVALRVPGGAKLSRKEIDEYTQFVGIYGAKGLAYIKVND 357

Query: 362 --RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +L          P+ K+L     ++I  R   ++GD  FF A             R  
Sbjct: 358 VSKLTTDETSGLQSPIVKNLTEGVLKSIVERTGAENGDIIFFGADKAKVVNEAIGALRIR 417

Query: 420 IAQELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           I  E G         +   W++DFP +E++E++ +    H+PFT P+ G E L   D  +
Sbjct: 418 IGHEHGEAGGYFVREWRPLWVVDFPMFEYDEDDDRWTACHHPFTSPKPGHEDLMATDPGA 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G IR H ++V  + F  + IS E  +N+FG L    + G PPH
Sbjct: 478 CIARAYDMVLNGWEIGGGSIRIHRADVQEKVFGALKISPEEQQNKFGFLLDNLKFGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A G+DR+V L+ GA ++R+V  FP +Q    LL  +P+ V  +QL+EL LR+ +  
Sbjct: 538 GGLAFGLDRLVTLMAGADSIRDVIAFPKTQRAQCLLTNAPNAVDEKQLKELSLRLRQKA 596


>gi|161523754|ref|YP_001578766.1| aspartyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189351485|ref|YP_001947113.1| aspartyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|238687025|sp|A9AFC7|SYD_BURM1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|160341183|gb|ABX14269.1| aspartyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189335507|dbj|BAG44577.1| aspartyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 600

 Score =  627 bits (1617), Expect = e-177,   Method: Composition-based stats.
 Identities = 227/599 (37%), Positives = 332/599 (55%), Gaps = 8/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQVKGLVRNRPEGTVNAGLKSGKIEVLCHELNVLNPSITPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   N   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTINVE-LDAKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KG   +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGAELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   +DGD  FF A             R  I   
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E+++E+ +   AH+PFT P+        +D     A
Sbjct: 421 EFGKANGLVEAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLESDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  +V  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREDVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+ +  +  
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQPA 599


>gi|329906027|ref|ZP_08274328.1| Aspartyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327547359|gb|EGF32189.1| Aspartyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 601

 Score =  627 bits (1617), Expect = e-177,   Method: Composition-based stats.
 Identities = 223/594 (37%), Positives = 335/594 (56%), Gaps = 10/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG    + +G  V L GWVHR R HGG+IF+D+RD  G+ QVV NP+    F  A+
Sbjct: 4   RTHYCGLTTEALLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCNPEQAEVFSTAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + G+V  R   T N+N+ +G+IE+  +++E+L+ +   P  +  +    E+
Sbjct: 64  IVRNEFCMRVTGVVRLRPDGTANSNLPSGKIEVLCEQLEVLNPSVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  + +  FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQNNLRLRYKVTMEVRKFLDSHGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQIVKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+   + + + N F  + Y +++  YG+DKPD+R  +   ++T
Sbjct: 242 MNEQEIRDLFEGMIRLVFKNALDID-LPNPFPVMPYSESMGLYGSDKPDMRVKLAFTDLT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E     +F+VFS   ++  G  V      G    R+  D   ++    G  GLAYI    
Sbjct: 301 EVMKDVDFKVFSGAANMLGGRVVGMRVPGGSAMPRSEIDAYTQFVGIYGAKGLAYIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+L+      I      QDGD  FF A             R  I   
Sbjct: 361 IAKGREGLQSPIVKNLHDAALTRILELTGAQDGDLIFFGADKAKIVNDAIGALRVKIGHS 420

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              ++  + + + ++  W++DFP +E++EE  +   AH+PFT P+ G E     D     
Sbjct: 421 DFGKKHDLFD-DVWKPLWVVDFPMFEYDEEGDRWHAAHHPFTAPKDGHEDFLETDPGKCI 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R H +EV  + F  + I  +  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWELGGGSVRIHRAEVQSKVFRAMKIDDDEAQLKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V  +QLREL +R+ 
Sbjct: 540 LAFGLDRIVTMMTGADSIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRLR 593


>gi|254282547|ref|ZP_04957515.1| aspartyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678750|gb|EED35099.1| aspartyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 596

 Score =  627 bits (1617), Expect = e-177,   Method: Composition-based stats.
 Identities = 229/599 (38%), Positives = 342/599 (57%), Gaps = 7/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG +  S +   + L GWV R R HGG+IFLD+RD  GI QVV +PD    FE A 
Sbjct: 2   RTHYCGSIDESLIDQTITLCGWVDRRRDHGGVIFLDMRDREGIVQVVFDPDTEEHFERAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR E+VL I G V +RS ET+N  + TG IE+  + +EIL+ A   P  +       E 
Sbjct: 62  RVRPEYVLKITGRVRARSPETVNPAMATGAIEVLGKSLEILNEAVTPPFQLDAHTSVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR++DLRR  +  N++ R++I   +R  +  E F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKYRYMDLRRPEMQSNLIARSKITYGVRAFLEGEGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHPGEFFALPQSPQLFKQLLMVAGFDRYYQIARCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +E+ D+++  E +++ +F++          F  + + +A+ RYG+DKPDLR  + + +++
Sbjct: 241 LEERDVMDITERMVKSLFQDHLGVTLPD--FPHMSWHEAMDRYGSDKPDLRIDLELVSIS 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS       G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DLMQEVDFKVFSGPAKDPEGRVAALCVPGGATLSRKDIDGYTKFVSIYGARGLAWVKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K +     E +  RL   DGD  FF A             R  +A++
Sbjct: 359 RAAGVSGLQSPILKFMPDAVVEQLLERLGAADGDIIFFGADKARVVNEALGALRIKVAED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG ++ + ++  W++DFP +E N+ +  +   H+PFT P   +E+LK  D  +  +  YD
Sbjct: 419 LGRVS-DDWKPLWVVDFPMFE-NDADGDLTPLHHPFTAPACDVETLKA-DPANALSRAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR H   +    F  +GI  E  E +FG L  A Q G PPHGG+A G+
Sbjct: 476 MVLNGSEIGGGSIRIHDQVMQQAVFDLLGIGPEEAEEKFGFLLSALQYGAPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           DR++ L++G  ++R+V  FP +Q+   ++  +P  VS  QL+EL +R+  + KK    S
Sbjct: 536 DRLITLMVGGHSIRDVIAFPKTQSAHCVMTDAPGEVSPAQLKELNIRLRGSDKKPADDS 594


>gi|255068294|ref|ZP_05320149.1| aspartate--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255047486|gb|EET42950.1| aspartate--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 602

 Score =  627 bits (1617), Expect = e-177,   Method: Composition-based stats.
 Identities = 229/605 (37%), Positives = 345/605 (57%), Gaps = 12/605 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFATAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNTAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++    +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFQDALGVD--LGDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYIKVND 357

Query: 364 DES----GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +     +     P+ K L+    + I  R   Q+GD  FF A             R  
Sbjct: 358 VSNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQNGDIIFFGADKAKVVNEAIGALRIK 417

Query: 420 IAQELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           +  E G  N    + ++  W++DFP +E++E+  +    H+PFT P+ G E L  +D  +
Sbjct: 418 VGLEHGAENGYFVDEWKPLWVVDFPMFEYDEDGDRWAAMHHPFTSPKLGHEDLMASDPEN 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G PPH
Sbjct: 478 CLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P+ V  +QLREL LR+ +   
Sbjct: 538 GGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNAVDDKQLRELSLRLRQKAT 597

Query: 597 KILKI 601
           +  + 
Sbjct: 598 ENKEA 602


>gi|323704146|ref|ZP_08115725.1| aspartyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323536212|gb|EGB25984.1| aspartyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 593

 Score =  627 bits (1617), Expect = e-177,   Method: Composition-based stats.
 Identities = 234/592 (39%), Positives = 345/592 (58%), Gaps = 11/592 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             RTH CG+L ++DVG  V + GWV R R  GG+IFL++RD  G+ Q+V +       F+
Sbjct: 8   MKRTHMCGELTINDVGKNVVVMGWVQRRRDLGGLIFLELRDRTGLIQIVFSEQLSKEAFD 67

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ VR+E+VL   G V+ RS E +N N+ TG IE+   + +ILS AE  P  V      
Sbjct: 68  KAQHVRNEYVLAASGKVVKRSEENVNPNLETGNIEIYVSEFKILSKAETPPFMVEDRNNV 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR ++ K ++ R +I   +R  +    FI+  TP+L  S+PEGARD+
Sbjct: 128 SEAIRLKYRYLDLRRPSMQKILITRYKITRIVRDFLDKNGFIDIETPLLIKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  G F+ALPQ+PQ +KQLLM SGFDRY+QIA C RDED R+DR P EF Q+D+E
Sbjct: 188 LVPSRVQPGKFFALPQSPQIFKQLLMISGFDRYYQIAKCLRDEDLRADRQP-EFTQIDIE 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV++DD+++  E ++  +F+E  N + +   F RI + +A+ R+G+DKPDLR  + + 
Sbjct: 247 MSFVDEDDVISINERMIAKIFKEILNID-LEVPFRRISWQEAMDRFGSDKPDLRFGMELK 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           N++  F  SEF+VF   +          +        R   D + E+ ++    GL +I 
Sbjct: 306 NLSSIFADSEFKVFRDAIENGGSVRAINVK-GAASIPRRQLDELVEYVKTYKAKGLVWIQ 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNH 419
              D          ++K L       +   ++ + GD    +   + +         R  
Sbjct: 365 MSDD-----GPKSQISKFLKEDELAQVLNAMEAEKGDLILIVADRNNMIVYDALGHLRLE 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +   +I+ N +EF W++DFP  E++EEEK+    H+PFT P+     +   +   ++A
Sbjct: 420 MGRRYNLIDENKYEFLWVVDFPLLEYSEEEKRYVAMHHPFTAPKDEDIEMLDKNPGQVRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G IR H +E+  + F  +G + E  E RFG L  AF+ G PPHGGI
Sbjct: 480 KAYDIVLNGMEIGGGSIRIHDTELQKKMFKVLGFNDEDAEARFGFLLNAFKYGAPPHGGI 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+ M+L G  N+R+V  FP +QN CDL+  +PS VS EQL EL +++
Sbjct: 540 AYGLDRLTMILTGTDNIRDVIAFPKTQNACDLMSDAPSEVSKEQLDELHIKV 591


>gi|308272199|emb|CBX28805.1| Aspartyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 604

 Score =  627 bits (1617), Expect = e-177,   Method: Composition-based stats.
 Identities = 248/591 (41%), Positives = 348/591 (58%), Gaps = 12/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+C +LG  D G  V L GWV R R HGG+IF+D+RD  G+TQVV NPD  S     A
Sbjct: 19  RTHNCCELGSKDTGKEVVLMGWVQRRRDHGGVIFIDLRDREGLTQVVFNPDYESKTHSKA 78

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+V+ I G V  R    IN N+ TG+IE+   +++IL+ A   P  +    +  E
Sbjct: 79  HEIRSEYVIGIRGKVEKRPEGMINPNLKTGEIEVFVSELKILNEACTPPFLIEDSVDVSE 138

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R K R +DLRR  + KN++ R +   S+R  +    FI+  TP+LT S+PEGARD+LV
Sbjct: 139 NVRLKNRHIDLRRPNIQKNLILRHKSAASVRKYLNGLGFIDIETPVLTKSTPEGARDYLV 198

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 199 PSRINPGMFYALPQSPQIFKQLLMISGFDRYYQIVRCFRDEDLRADRQP-EFTQIDIEMS 257

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV +DD+++  E +++ +F++  + +     FL+I Y +AI RYG DKPDLR  + + +V
Sbjct: 258 FVGEDDVMDLAEGLIKNLFKDVLDKDI-QTPFLKIPYSEAIDRYGLDKPDLRFGLELKDV 316

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-GGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++    S F+VFS ++      +  A+ AKG  G +R   D    +A      GLA+I  
Sbjct: 317 SDIVKTSGFKVFSTVVEKGGIVK--ALNAKGCVGFSRKEIDDFTAFAAVYKAKGLAWIKV 374

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D         P+AK       +A+  R+ ++ GD  FF+A  P          RNHIA
Sbjct: 375 KED-----GWQSPIAKFFTENEKQALAERIGIETGDLIFFVADQPKITNDALGHLRNHIA 429

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           Q+L +I+ N F F W+  FP  E++E EK+    H+PFT P      L     L++++  
Sbjct: 430 QKLNLIDDNVFNFLWVTQFPMIEYDETEKRYQAMHHPFTSPLEEDFELLKETPLAVRSRA 489

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  ++    F  +G++ E    +FG L  A   G PPHGGIA 
Sbjct: 490 YDLVLNGSEIGGGSIRIHQKKLQETVFETLGMTPESYNEKFGFLLSALDSGAPPHGGIAF 549

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G DR++M+L G  ++R+V  FP +Q    LL  +PS  S  QL EL LR+ 
Sbjct: 550 GFDRLIMILCGGSSIRDVIAFPKTQKASCLLTNAPSETSKAQLDELCLRVK 600


>gi|229520405|ref|ZP_04409830.1| aspartyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229342503|gb|EEO07496.1| aspartyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 591

 Score =  627 bits (1617), Expect = e-177,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 329/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A  +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLACSLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVD--LGDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLLKDVDFKVFSGPANDPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L     +AI  R   Q GD   F A             R    +E
Sbjct: 357 LAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LGI N + +   W++DFP +E +++E  +   H+PFT P          +     +  YD
Sbjct: 417 LGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +    K
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAVKLATK 588


>gi|169831069|ref|YP_001717051.1| aspartyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169637913|gb|ACA59419.1| aspartyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 601

 Score =  627 bits (1617), Expect = e-177,   Method: Composition-based stats.
 Identities = 242/594 (40%), Positives = 347/594 (58%), Gaps = 9/594 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIA 62
            RTHSCG L   +VG  V + GWV   R HGG++F+D+RD  G+ QVV +P D   F  A
Sbjct: 10  KRTHSCGSLSRKEVGLRVVVMGWVDSRRDHGGLVFVDLRDRSGVVQVVFSPEDRKSFTKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL + G V  R A T N  + TG+IE+ A++  IL+ A      +    E  E
Sbjct: 70  QTLRSEYVLAVAGTVRRRPAGTENPKLSTGEIEIQAEEARILNRARTPVFYIEDGVEVDE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YR+LDLRR  + + +  R R   ++R  + +  F E  TP LT S+PEGARD+LV
Sbjct: 130 NLRLRYRYLDLRRPEMQRTLEFRHRAAKAVRDFLDSRGFWEIETPFLTRSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM SG +RYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 190 PSRLNPGKFYALPQSPQLFKQLLMVSGCERYFQIVRCFRDEDLRADRQP-EFTQIDLEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+  D++  +E ++  ++ E +    +   F RI Y DA+ R+GTDKPDLR  + +H+V
Sbjct: 249 FVDSGDVMALVEEMVAALYRETTGVE-LEIPFPRITYADAMDRFGTDKPDLRYGMELHDV 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+      F+VF  +       +  ++P  G   +R   D +  +A   G  GLAY+ + 
Sbjct: 308 TDVAAGCGFKVFQTVAGGGGRVKGISVP-GGAVFSRKELDDLTRFAGQYGARGLAYLLYT 366

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                      P+AK       EA+  RL+   GD   F+A  P    +  +  R H+A+
Sbjct: 367 -----EEGIRSPIAKFFTAGELEALVRRLEAVPGDLLLFVADRPAVVAAALSALRRHLAE 421

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            LG+I+ +  EF W+ +FP  E++E+EK+    H+PFT P     +L   +   ++A  Y
Sbjct: 422 RLGLIDRSRNEFVWVREFPLLEYDEDEKRFVAVHHPFTAPVEEDIALLTVEPARVRARAY 481

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG EI  G IR H  +V    FS +G+    V+ +FG L  AF+ G PPHGG A G
Sbjct: 482 DLVLNGVEIGGGSIRIHRRDVQELVFSAIGLEPGEVKEKFGFLLEAFEYGTPPHGGFAVG 541

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            DR+VML  G + +R+V  FP +Q+  DL+ G+P  V+  QLRELG+ +   PK
Sbjct: 542 FDRLVMLAAGKQTIRDVMAFPKTQSGTDLMTGAPDAVAPAQLRELGIIVASKPK 595


>gi|240081179|ref|ZP_04725722.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240124092|ref|ZP_04737048.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|260439925|ref|ZP_05793741.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|268597291|ref|ZP_06131458.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268682715|ref|ZP_06149577.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|291043203|ref|ZP_06568926.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|268551079|gb|EEZ46098.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268622999|gb|EEZ55399.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|291012809|gb|EFE04792.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 602

 Score =  627 bits (1617), Expect = e-177,   Method: Composition-based stats.
 Identities = 233/607 (38%), Positives = 353/607 (58%), Gaps = 16/607 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLGIAGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +     F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGGFPRMPYSEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +++GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQNGDIIFFGADKAKVVNEAVGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+V L+ GA+++R+V  FP +Q    LL  +P++V  +QLREL LR+ + 
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTDAPNSVDDKQLRELSLRLRQK 595

Query: 595 PKKILKI 601
             +  + 
Sbjct: 596 AVETKEA 602


>gi|330818289|ref|YP_004361994.1| Aspartyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327370682|gb|AEA62038.1| Aspartyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 600

 Score =  627 bits (1617), Expect = e-177,   Method: Composition-based stats.
 Identities = 230/596 (38%), Positives = 330/596 (55%), Gaps = 8/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQVKGLVRGRPDGTINAGLKSGKIEVLCHELTVLNPSVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPHMQNNLRLRYRVAIEVRKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF++      +  +F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEEMIRHVFKKTIGVE-LDASFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G        KG    R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVEFKVFSTPANSKDGRVAALRVPKGSELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   QDGD  FF A             R  I   
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N    + ++  W++DFP +E++E+E +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVESGWKPLWVIDFPMFEYDEDEVRYVAAHHPFTSPKDEHLEYLETDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R    +V  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIFQEDVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QL+EL +R+ +  
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLKELHIRLRQPE 596


>gi|254441702|ref|ZP_05055195.1| tRNA synthetase class II (D, K and N) subfamily [Octadecabacter
           antarcticus 307]
 gi|198251780|gb|EDY76095.1| tRNA synthetase class II (D, K and N) subfamily [Octadecabacter
           antarcticus 307]
          Length = 617

 Score =  627 bits (1617), Expect = e-177,   Method: Composition-based stats.
 Identities = 324/617 (52%), Positives = 418/617 (67%), Gaps = 27/617 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL   +VG  VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+PDS  F 
Sbjct: 1   MHAYRSHTCADLNKDNVGDTVRLSGWVHRVRDHGGLLFIDLRDHYGITQVMADPDSPVFG 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR+EW + IDG V +R A  +N  + TG IE+  + IE+L  A ELPL VFG++EY
Sbjct: 61  DIEKVRNEWCIRIDGEVKARDASLVNDKLSTGAIEVFIRDIEVLGAAAELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYR+LDLRR+ + KN+  R+ +++SMR RM  + F E  TPI+T+SSPEGARDF
Sbjct: 121 PEETRLKYRYLDLRREKMQKNMKLRSDVVSSMRKRMWDKGFREFQTPIITSSSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           L+PSR++ G FYALPQAPQQ+KQL+M SG+D+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LIPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ V+ G+FEEF NG  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVITGIFEEFGNGRNVDQTWEQISYRDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+K+L  +           GGG  R FCDRMN +A+ +G PG+ YIF
Sbjct: 301 VVSEHFRDSGFAIFAKLLEQDGTEVRAIPAPTGGG--RKFCDRMNVFAQKEGLPGMGYIF 358

Query: 361 WRLDESGNV------------------------AGMGPVAKHLNIVNTEAIRVRLDMQDG 396
           WR   + ++                           GP+AK++    TEAIR +L +  G
Sbjct: 359 WRKQSADSIAQERGISVKDVNALIKSGEITLGDEAAGPLAKNIGPERTEAIRQQLGLTVG 418

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+ FF+ G P  F + A  AR  I  ELG+ + N F F WI+DFP YE + E  KIDF H
Sbjct: 419 DAAFFLGGKPKTFEAVAGKARAVIGDELGLTDLNRFAFAWIVDFPIYERDAETGKIDFEH 478

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           NPF+MPQGGM +L G     +  +QYDL CNG+E+ SG IRNH  E+M +AF   G  K+
Sbjct: 479 NPFSMPQGGMAALDGK-PEDVLGYQYDLACNGYELVSGAIRNHRPEIMFKAFEIAGFGKD 537

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
            VE RFGG+  AFQ G PPHGG AAG+DRIVMLL  A N+R+V +FPM+Q   DL+M +P
Sbjct: 538 EVEKRFGGMVNAFQYGAPPHGGCAAGVDRIVMLLADADNLRDVIMFPMNQRAEDLMMSAP 597

Query: 577 STVSVEQLRELGLRIVE 593
           S    EQ+REL LR++ 
Sbjct: 598 SEPQNEQMRELRLRVIP 614


>gi|308049720|ref|YP_003913286.1| aspartyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307631910|gb|ADN76212.1| aspartyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 588

 Score =  627 bits (1616), Expect = e-177,   Method: Composition-based stats.
 Identities = 221/593 (37%), Positives = 333/593 (56%), Gaps = 9/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG +  + +G  V L GWV+R R  GG+IFLD+RD  GI QVV +PD    FE A 
Sbjct: 2   RSHYCGHVTETLIGQEVTLVGWVNRRRDLGGVIFLDLRDREGIVQVVYDPDLPEVFETAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R E+ + + GLV  R    +NAN+ TG IE+  +++ I++ AE   LP+    +  E 
Sbjct: 62  SLRGEFCVQVKGLVRGRPESQVNANMTTGAIEVLGRELTIINKAEP--LPIDFNTDVSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R R  + +R  +  + F++  TPILTA++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMAEKMKFRARFTSEVRRFLDDQGFMDVETPILTAATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRTHKGQFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  ++++   E ++R +F++  N +     F  + Y++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAEEVMAVTEAMIRTIFKKMLNVDLPQ--FPHMSYEEAMRRYGSDKPDLRNPLELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DLLADVEFKVFSGPANDPEGRVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L+     AI  R      D   F A D           R    ++
Sbjct: 357 TGKGIEGVQSPVAKFLSDDIVNAIIERTGAVANDIVLFGADDAKVVADAMGALRLKAGED 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G++    +   W++DFP +E  +   +    H+PFT P+         +  +  +  YD
Sbjct: 417 FGLV-AEGWAPLWVVDFPMFEKAD--GRYYALHHPFTAPRDMTPEELEANPDTALSNAYD 473

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H +E+   AF  +GI  +  + +FG L  A + G PPH G+A G+
Sbjct: 474 MVLNGVEVGGGSVRIHRAEMQSAAFRVLGIDDQEAKEKFGFLLDALKYGTPPHAGLAFGL 533

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML++GA+++REV  FP +      L  +P + + EQL ELG++ +   K
Sbjct: 534 DRLVMLMVGAESIREVMAFPKTTTAACPLTSAPGSANPEQLVELGIQRIPAEK 586


>gi|329296282|ref|ZP_08253618.1| aspartyl-tRNA synthetase [Plautia stali symbiont]
          Length = 593

 Score =  627 bits (1616), Expect = e-177,   Method: Composition-based stats.
 Identities = 225/595 (37%), Positives = 331/595 (55%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  + D    F++A 
Sbjct: 2   RTEYCGQLNLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIAQVFFDADHQQAFQLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R  +  N+++ TG IE+ A ++ I++ AE +  P+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRAREEKNRNSDMATGDIEVFAHELNIINRAEPM--PLDSNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  YR+LDLRR  + + +  R RI + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLTYRYLDLRRPEMAQRLKNRARITSFVRRFMDGEGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMISGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + + + ME ++R ++ +    +    +F ++ + +A+ RYG+DKPDLRNP+ + +V 
Sbjct: 239 MSAEQVRSVMERMIRELWLDIKGID--LGDFPQMTFAEAMNRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF+   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLLKSVEFQVFAGPANDPKGRVAALRVPGGAALTRKQIDEYGSFVGIYGAKGLAWMKINA 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             SG      PV K L     EAI  R D QDGD  FF A             R  + ++
Sbjct: 357 RASGFDGVQSPVVKFLTPDIVEAILQRTDAQDGDLIFFSADRAKVVADALGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I N   +   W++DFP +E + +E  +   H+PFT P+         D     A  YD
Sbjct: 417 LQITNDKAWAPLWVVDFPMFEED-DEGGLAAMHHPFTSPKALTAEQLAADPTQAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H   +    FS +GIS+E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHSGNMQQTVFSILGISEEEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           DR+ MLL    N+R+V  FP +     L+  +PS  +   L +LG++I   PKK+
Sbjct: 536 DRLTMLLTDTDNIRDVIAFPKTTAAACLMTEAPSEANPAALADLGIQIA--PKKV 588


>gi|319944729|ref|ZP_08018993.1| aspartate--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319741978|gb|EFV94401.1| aspartate--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 609

 Score =  627 bits (1616), Expect = e-177,   Method: Composition-based stats.
 Identities = 228/598 (38%), Positives = 342/598 (57%), Gaps = 10/598 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEI 61
             R+   G+L  + +   V L GWVHR R HGG+IF+D+RD  G+ Q+V +PD    F  
Sbjct: 1   MKRSCYVGELSEAFLDQEVTLMGWVHRRRDHGGVIFIDLRDREGLAQIVCDPDRAETFRT 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+R+E+ + I G V  R   T+N  I +GQ+E+   ++E+L+ +   P  +  E    
Sbjct: 61  AESLRNEYCIRITGKVRRRPEGTVNDGIRSGQVEVLCHELEVLNPSVTPPFLLDDENLS- 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R  YR LDLRR  + KN++ R R+  ++R  +    F++  TP+LT S+PEGARD+L
Sbjct: 120 ENTRLTYRVLDLRRPAMQKNLMLRHRVTMAVRRYLDDLGFVDVETPMLTRSTPEGARDYL 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D E 
Sbjct: 180 VPSRVHDGYFYALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCET 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ +++I    E ++R +F++  N + + + F  + + +A+R YG+DKPDLR  +    
Sbjct: 239 SFLSEEEIRGIFEPMIRTIFKQVMNVD-LPDPFPTMSFAEAMRLYGSDKPDLRVKLQFTE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F+VFS   +   G  V      G   +R+  D   ++    G  GLA+I  
Sbjct: 298 LTDVMKTVDFKVFSGPANAKDGRVVALRVPGGASISRSEIDAYTQFVGIYGAKGLAWIKV 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              ++G      P+ K+L+     AI  R   QDGD  FF A             R  I 
Sbjct: 358 NDVKAGREGLQSPIVKNLHDEAIAAILERTGAQDGDIIFFGADRAKVVNDAIGALRVKIG 417

Query: 422 QE-----LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
                   G+     ++  W++DFP +E++E+EK+    H+PFT P+ G E L  +D  +
Sbjct: 418 HSEFGKGHGLFEAG-WQPLWVLDFPMFEYDEDEKRWVALHHPFTSPKDGHEDLLESDPGA 476

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YDLV NG+E+  G +R H  +V  + F  + I  E  E +FG L  + + G PPH
Sbjct: 477 CIAKAYDLVLNGWEMGGGSVRIHRDDVQSKVFRALAIGPEEAEAKFGFLLSSLRYGAPPH 536

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           GG+A G+DR+V L+ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+   
Sbjct: 537 GGLAFGLDRMVTLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLRNP 594


>gi|126654003|ref|ZP_01725838.1| aspartyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589520|gb|EAZ83663.1| aspartyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 589

 Score =  627 bits (1616), Expect = e-177,   Method: Composition-based stats.
 Identities = 225/593 (37%), Positives = 345/593 (58%), Gaps = 8/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH+  +L  +  G  V L GWV R R  GG+IF+D+RD  GITQVV +PD +    +A 
Sbjct: 4   RTHASNELSETLQGEKVVLKGWVQRRRDLGGLIFIDLRDRTGITQVVFSPDVAEAHALAD 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I+G V+ R+ + IN N+  G+IE+ A  + +++ A+  P  +    +  E 
Sbjct: 64  KVRSEYVIEIEGTVILRTEDQINPNVPNGKIEVEATNLVVINTAKTTPFQIEDRTDVSED 123

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  +      R+ +  ++R  +  E F+E  TPILT S+PEGARD+LVP
Sbjct: 124 LRLKYRYLDLRRPVMFDTFKMRSDVTRTIRNFLQNEGFLEVETPILTKSTPEGARDYLVP 183

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM +GF++YFQIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 184 SRVHEGEFYALPQSPQLFKQLLMVAGFEKYFQIARCFRDEDLRADRQP-EFTQVDIETSF 242

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + Q+++L   E +++ V +E    +     F R+ Y +A+ RYG+DKPD+R  + +  + 
Sbjct: 243 LTQEEVLEMNERLIQAVMKEVKGIDI-PAPFQRMKYQEAMDRYGSDKPDVRFGLELVALN 301

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           + F    F+VF+  ++     +   I       +R   D + ++    G  GLA++    
Sbjct: 302 DVFEDCGFKVFADTVAQGKQVKSINIKGAADKYSRKDMDELTKFVGIYGAKGLAWLKVT- 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
                    GP+AK  +     A+  R+  + GD   F+A       +     R+ + Q+
Sbjct: 361 ----EEGLNGPIAKFFDEALAAALIERMGAEVGDILVFVADKASVVAASLGALRSKLGQD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +I+ + F F WI D+P +E++EE+ +   AH+PFT P      L   D  +++A  YD
Sbjct: 417 LELIDESQFAFLWITDWPLFEYSEEDGRYYAAHHPFTRPFDEDIPLMDTDPGAVRAQAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R +  ++  + F  +G S+E  + +FG L  AF+ G+PPH G+A G+
Sbjct: 477 IVLNGYELGGGSLRIYERDLQEKMFELLGFSEEEAQAQFGFLLEAFEYGVPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR VMLL G  N+R+   FP + +   L+  +PS VS EQL EL L I    K
Sbjct: 537 DRFVMLLAGRHNLRDTIAFPKTASASCLMTEAPSEVSTEQLSELSLAIKPFRK 589


>gi|319795424|ref|YP_004157064.1| aspartyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315597887|gb|ADU38953.1| aspartyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 602

 Score =  627 bits (1616), Expect = e-177,   Method: Composition-based stats.
 Identities = 233/604 (38%), Positives = 345/604 (57%), Gaps = 14/604 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RTH CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD A  F +A+
Sbjct: 4   RTHYCGLVTEALLGQTVTLCGWVNRRRDHGGVIFIDVRDREGYVQVVCDPDRASTFAVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + I GLV SR   T N ++ +G+IE+   ++++L+ +   P  +  +    E+
Sbjct: 64  NLRNEFCVQITGLVRSRPEGTTNDSLKSGKIEVLCHELKVLNPSVTPPFLLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + +N++ R ++    R  + A  FI+  TP+L  S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPAMQRNMMLRYKVTMETRKFLDANGFIDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ GSF+ALPQ+PQ +KQLLM +G+DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRVHDGSFFALPQSPQLFKQLLMVAGYDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    E ++R VF   +  +     F  + Y DA+ +YG+DKPDLR  +    +T
Sbjct: 242 LAEEEIREMFEGMIRNVFRNAAGIDLPV--FPTMTYGDAMFKYGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG---GNRAFCDRMNEWARSQGQPGLAYIF 360
           E     EF+VFS   +   G  V      GGG    +R   D   E+ +  G  GLAYI 
Sbjct: 300 ELMKRVEFKVFSNAATQKDGRVVALRVPGGGGEGGLSRGEIDAYQEFVKIYGAKGLAYIK 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                +G      P+ K+L+      I  R   ++GD  FF A             R  I
Sbjct: 360 VNDAAAGREGLQSPIVKNLDDNTLAEIIARTGARNGDILFFGADKEKVVNDAIGALRVKI 419

Query: 421 A-----QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
                 ++ G+ + + +   W++DFP +E++EE ++    H+PFT P+ G E L      
Sbjct: 420 GHSAFGKKSGLFD-DRWAPLWVVDFPMFEFDEEGQRWSAVHHPFTAPKDGHEDLMDTAPE 478

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              A  YD+V NG E+  G +R H  EV  + F  + IS E  + +FG L  A Q G PP
Sbjct: 479 KCIAKAYDMVLNGIEMGGGSVRIHREEVQSKVFRALKISAEDAQLKFGFLLDALQYGAPP 538

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VML+ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +++   P
Sbjct: 539 HGGIAIGLDRLVMLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIKLRNTP 598

Query: 596 KKIL 599
           +   
Sbjct: 599 QAAA 602


>gi|309972523|gb|ADO95724.1| Aspartyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 588

 Score =  627 bits (1616), Expect = e-177,   Method: Composition-based stats.
 Identities = 216/592 (36%), Positives = 332/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ + + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRVYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++ +    +     F  + + +A+ R+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHGLWLDTIGVD--LGKFPVMTWQEAMCRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVEFKVFNEPANNPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R++ Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWKPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFSPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+  
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVKAE 588


>gi|229552366|ref|ZP_04441091.1| aspartate--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539737|ref|YP_003174236.1| aspartyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|229314268|gb|EEN80241.1| aspartate--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257151413|emb|CAR90385.1| Aspartyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 601

 Score =  627 bits (1616), Expect = e-177,   Method: Composition-based stats.
 Identities = 221/603 (36%), Positives = 327/603 (54%), Gaps = 13/603 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT   GD+    +   V L GWV + R  G +IF+D+RD  GI Q+V +   D     +
Sbjct: 3   KRTCYAGDVNTDYLDQEVTLKGWVQKRRSLGSLIFIDLRDREGIVQLVFSEAIDRDALTV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A SVRSE+V+ + G+V  R  + +N  + TG IE+    I IL+ A+  P  +       
Sbjct: 63  ANSVRSEYVVEVQGVVKKRKPQAVNPEMKTGDIEVEVHDITILNKAKTPPFYIEDNVAVT 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  + KYR+LDLRR  + KNI  R  I+ S+   +    FI+  TP LTAS+PEGARD+L
Sbjct: 123 EETKLKYRYLDLRRPEMQKNIFTRAHIMRSVHHYLDDNGFIDVETPTLTASTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  GSFYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRVYPGSFYALPQSPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQP-EFTQIDLET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+  ++I +  E ++  V  +    + V   F RI + +A+ +YG+DKPDLR  + + +
Sbjct: 242 SFLSAEEIQDITEGLIAQVMHDVKGID-VDLPFQRITWQEAMDKYGSDKPDLRFDMQIQD 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V++    S+F+VF+  +          +P      +R   D   ++ +  G  GLA++  
Sbjct: 301 VSDFVKDSDFKVFAGAVQNGGQVHAIVLPGGAAKYSRKMIDAQQDYIKRFGAKGLAWLKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK        A+   +    GD   F+A             R H  
Sbjct: 361 TDD-----GISGPIAKFFGDG--AALTQAVGAHTGDLVLFVADKAKVVADALGYLRTHFG 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+   F FCW++D+P +E++E  ++   AH+PFTMP      L   D  +  A  
Sbjct: 414 HDLGLIDEKEFRFCWVVDWPLFEYDEGIQRWVPAHHPFTMPNEEDVHLLDTDPHAAHAQS 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  +    +G + E  +  FG L  A   G PPHGG+A 
Sbjct: 474 YDIVLNGYELGGGSIRIHNRDIQEKMLKALGFTPERAQKSFGFLLNALDYGFPPHGGLAI 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE--NPKKIL 599
           G+DR  MLL G  N+R+V  FP +    + +  +PS V+  QL++LG+ +    +P+K  
Sbjct: 534 GLDRFTMLLTGRDNIRDVIAFPKNSKASEPMTSAPSPVADIQLKDLGIEVRPDVDPEKEH 593

Query: 600 KIS 602
           +  
Sbjct: 594 EGD 596


>gi|260887818|ref|ZP_05899081.1| aspartate--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|330838613|ref|YP_004413193.1| aspartyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|260862424|gb|EEX76924.1| aspartate--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|329746377|gb|AEB99733.1| aspartyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 599

 Score =  627 bits (1616), Expect = e-177,   Method: Composition-based stats.
 Identities = 234/601 (38%), Positives = 358/601 (59%), Gaps = 11/601 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
             RT  CG+L   DVG+ V LSGWV R R HGG+IF+D+RD  G  QVV +  +     F
Sbjct: 7   MKRTRHCGELREGDVGAEVVLSGWVSRRRDHGGLIFVDMRDRSGFVQVVYDEAAMGKEAF 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+++R+E+V+ + G V +RS +T+N +I TG+IE+  +++ IL+ A+  P  +    +
Sbjct: 67  HKAETLRNEFVIGVRGKVRARSEDTVNPHIETGKIEVVCEELRILNTAKTPPFYIQDNID 126

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E++R KYR+LDLRR  +  N++ R R+   MR  +    FIE  TP+L  S+PEGARD
Sbjct: 127 VDETLRLKYRYLDLRRPEMQANLMLRHRVTKIMRDFLDRHEFIEIETPMLCKSTPEGARD 186

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR+N G FYALPQ+PQ +KQ+LM +GF++YFQI  CFRDED R+DR P EF QLD+
Sbjct: 187 FLVPSRLNPGKFYALPQSPQIFKQILMVAGFEKYFQIVRCFRDEDLRADRQP-EFTQLDI 245

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF++++DIL  ME ++  +F++      +   FLR+ +D+A+ R+G+DKPDLR  + +
Sbjct: 246 ETSFLDENDILELMEGLVAELFDKTLGIK-LETPFLRMKWDEAMERFGSDKPDLRFGMEL 304

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +++E+   S+F+VFS +L      +V  +        R   D + ++ +  G  GLA+I
Sbjct: 305 MDISEYVKGSDFKVFSSVLENGGQVKVINVEDY-ANIPRRELDGLVQYVQGYGAKGLAWI 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +            P  K       E I+     + GD    IA  PL       + R  
Sbjct: 364 QYT-----EEGVKSPFKKFYADEVFEKIKEACHAKTGDLLLVIADKPLVVAQALGELRLE 418

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+  G+I+ +  +F W+ DFP +E+NEEEK+    H+PFT P+        +D   +KA
Sbjct: 419 MARRRGLIDADALKFLWVTDFPMFEYNEEEKRWKAMHHPFTAPRREDVEYLMSDPGRVKA 478

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G +R +  ++  + F  +G+++E    +FG +  AF+ G PPHGGI
Sbjct: 479 NAYDMVLNGVEIGGGSLRIYQGDLQEKVFEAIGLTQEEARQKFGFMMDAFEYGTPPHGGI 538

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           A G+DR+VML+   +++R+V  FP +Q+  D++  +PS V  +QLREL +R     K+  
Sbjct: 539 AFGLDRLVMLMAKRRSIRDVIAFPKTQSASDVMSHAPSEVDAKQLRELYVRSTAVKKEEK 598

Query: 600 K 600
           K
Sbjct: 599 K 599


>gi|194017133|ref|ZP_03055745.1| aspartyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194011001|gb|EDW20571.1| aspartyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 594

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 344/596 (57%), Gaps = 10/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG++    +G  V L GWV + R  GG+IF+D+RD  GI Q V NPD      E A
Sbjct: 6   RTFYCGEVTEDQIGQTVVLKGWVQKRRDLGGLIFIDLRDRTGIVQAVFNPDLSKEALETA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP 121
           +S+R+E+VL I G V++R   TIN N+ TG+IE+  + + +L+ A+  P  +  +  E  
Sbjct: 66  ESIRNEYVLDIKGTVVAREEATINPNLKTGKIEIQVETVSVLNEAKTPPFVISDQADEVS 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  + + +  R  +  + R  +    F++  TPILT S+PEGARD+L
Sbjct: 126 EDVRLKYRYLDLRRPAMFETMKMRHEVTRAFRHFLDDNGFLDIETPILTKSTPEGARDYL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 186 VPSRVHEGEFYALPQSPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQP-EFTQVDIEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI+   E ++  V ++      ++    R+ YD+A+  YG+DKPD R  + + N
Sbjct: 245 SFMSQEDIMTLAEEMMAKVMKDVKGVE-LTLPLPRMTYDEAMNSYGSDKPDTRFEMKLVN 303

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    S+F+VFS  +      +   +       +R   D +  +A + G  GLA++  
Sbjct: 304 ISDTVKDSDFKVFSGAVKNGGAVKAINVKGAAANYSRKDIDALGAFAANYGAKGLAWLKA 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E       GP+AK  +      ++ +L +++GD   F+A             R  + 
Sbjct: 364 EGTE-----LKGPIAKFFDEAKQAELKEQLQVEEGDLLLFVADKTSVVHDALGALRLKLG 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL +I+ + F F W++D+P  E +EEE +   AH+PFTMP      L       +KA  
Sbjct: 419 KELELIDESVFNFLWVVDWPLLEKDEEEGRFYAAHHPFTMPVRDDLELIETSPEDMKAQA 478

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+  G IR    ++  + FS +G SKE    +FG L  AF+ G+PPHGGIA 
Sbjct: 479 YDLVLNGYELGGGSIRIFEKDIQEKMFSLLGFSKEEAYEQFGFLLDAFEHGVPPHGGIAL 538

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VMLL G  N+R+   FP + +   +L  +P  VS  QL EL L I    K+
Sbjct: 539 GLDRLVMLLAGRSNLRDTIAFPKTASASCVLTDAPGHVSEAQLDELSLAIKTKVKQ 594


>gi|313608678|gb|EFR84515.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 591

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 226/597 (37%), Positives = 336/597 (56%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +    
Sbjct: 60  LEIADSVRNEFVVTIKGTVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +++I    E++L  V +E  N       F R+ Y +A+ R+G+DKPD+R  + 
Sbjct: 239 LETSFLTKEEIQAITEDMLVDVVKEAKNITI-DKPFPRMTYKEAMDRFGSDKPDIRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + NV++     +F+VF   +  +   +     +     +R   D +  +  + G  GLA+
Sbjct: 298 LQNVSDVVKDVDFKVFQSAIENDGEVKAINAKSAAANFSRKDLDALGIFVANYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E+G +   GP+AK         ++  L  +DGD   F A       +     RN
Sbjct: 358 LKV---EAGELK--GPIAKFFPEDKAAELKGALQAEDGDLLLFAADKADIVAASLGALRN 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++L +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + 
Sbjct: 413 KLGKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVM 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGG
Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 533 IALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSAAQLAELKLETVKKE 589


>gi|152979462|ref|YP_001345091.1| aspartyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704347|sp|A6VQA9|SYD_ACTSZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150841185|gb|ABR75156.1| aspartyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 589

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 213/593 (35%), Positives = 328/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L   ++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RSHYCGALNRGNIGQEVTLSGWVHRRRDLGGLIFIDMRDREGIVQVCFDPKYQEALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN N+ TG++E+ A+ + + + ++   LP+   +   E 
Sbjct: 63  DLRNEFCIQIKGEVTARPGNQINKNMATGEVEVLAKALSVYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   MEN++RG++      +     F  + +++A+ R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAPEVRAIMENMIRGLWLNILGAD--LGKFPIMTWNEAMTRFGSDKPDLRNPLEIADVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF+   +   G         G    R   D   ++    G  GLA++    
Sbjct: 298 DIVKDVDFKVFADPANDANGRVSVIRVPNGASITRKQIDEYTQFVGIYGAKGLAWLKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    +AI  R   Q GD  FF A             R  + ++
Sbjct: 358 VNAGLEGVQSPIAKFLSEEKIKAIFDRTSAQTGDILFFGADKWQIATDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+         D  +  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFECDEE-GNLAAMHHPFTSPKDFSPEQLEADPTAAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI ++    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEQQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  + + L EL + +V   +
Sbjct: 537 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQQALEELAITVVTKEE 589


>gi|257877238|ref|ZP_05656891.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257811404|gb|EEV40224.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 591

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 232/595 (38%), Positives = 337/595 (56%), Gaps = 10/595 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG +  + +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+     +EI
Sbjct: 3   KRTVYCGLVNETHLNQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEVSKEAWEI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A   RSE+VL + G V++R+ E IN  ++TG  E+   +I IL+ A+     +  ++   
Sbjct: 63  ADKCRSEYVLEVTGQVINRAPEAINPKMVTGAYEVMISEITILNTAKTPAFLIEDDQTVG 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  +  NIV R +   ++R  +   +F++  TP L  S+PEGARD+L
Sbjct: 123 DEIRMKYRYLDLRRPKMTNNIVMRAKTTQAIRNFLDTNDFLDIETPYLGKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRIYPGHFYALPQSPQIFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+  ++I    E +L  V  E      V+  F R+ YD+A+ RYG+DKPD R  + + +
Sbjct: 242 SFLTAEEIQTYTEELLAKVMREVKGIE-VTLPFPRMTYDEAMGRYGSDKPDTRFDMELID 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E     +F+VF   L      +V          +R   D +  +A   G  GLA++  
Sbjct: 301 LSEVVKDVDFKVFQMALEKGGVVKVLNAKGAADKYSRKDMDNLGHYAGQFGAKGLAWVKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK L    T+AI    + + GD   F A       +     RN + 
Sbjct: 361 EED-----GLKGPIAKFLTEA-TDAIIAAANAEVGDILMFGADSFAIVSATLGAIRNKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +ELG+I+ + F F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A  
Sbjct: 415 KELGLIDESKFNFLWVTDWPQFEYDEEAGRYVSAHHPFTLPKESDLPLLTTDPSKVYAQA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  EV  Q F  +G S+  ++N+FG L  A   G PPHGGIA 
Sbjct: 475 YDIVLNGYELGGGSLRIHTREVQEQMFEALGFSRREMQNQFGFLLDALDYGFPPHGGIAL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VMLL G +N+REV  FP +    D +  +PSTVS  QL +L + +    +
Sbjct: 535 GLDRLVMLLAGEENIREVIAFPKNGKAADPMSQAPSTVSPMQLFDLNIDVTTVEE 589


>gi|91793242|ref|YP_562893.1| aspartyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123060934|sp|Q12N06|SYD_SHEDO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91715244|gb|ABE55170.1| aspartyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 593

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 217/593 (36%), Positives = 333/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S +G  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F++A 
Sbjct: 2   RSHYCGDINRSHLGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLKDVFDVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R E+ + + GLV +R    IN+ + TG+IE+  + + I++ +  LPL +   +   E 
Sbjct: 62  SLRGEFCVQVTGLVRARPDSQINSQMKTGEIEVLGKGLTIINASAPLPLSMDNHQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +++R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAERLIFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  ++++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MTSEEVMVKTEEMMRGLFLELLNVDLGE--FPRMTYNEAMRRFGSDKPDLRNPLELVDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DLLKEVEFAVFNGPANDEEGRVAALRIPNGATLSRKQIDDYTKFVGIYGAKGLAWMKIND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PV K L       I  R   Q GD   F A             R    ++
Sbjct: 359 LAAGMEGIQSPVLKFLTESIVNDIISRTGAQTGDIILFGADKANVVAEAMGALRLKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    +   W++DFP +E           H+PFT P+G   +    +  +  +  YD
Sbjct: 419 FELL-EGQWRPLWVIDFPMFEKI--NGGFHAVHHPFTAPRGVTAAELEANPANRVSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H +E+    F  +GI +E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGCELGGGSVRIHNAEMQSAVFRILGIEEEEAKEKFGFLLEALRYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DRI+ML+ GA ++R+V  FP +      L  +P   +  QL ELG+++VE  K
Sbjct: 536 DRIIMLMTGATSIRDVMAFPKTTTAACPLTNAPGFANPAQLTELGIKVVEKVK 588


>gi|116495009|ref|YP_806743.1| aspartyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|227534983|ref|ZP_03965032.1| aspartyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|239631396|ref|ZP_04674427.1| aspartyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301066572|ref|YP_003788595.1| aspartyl-tRNa synthetase [Lactobacillus casei str. Zhang]
 gi|122263574|sp|Q038S1|SYD_LACC3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116105159|gb|ABJ70301.1| aspartyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|227187374|gb|EEI67441.1| aspartyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|239525861|gb|EEQ64862.1| aspartyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300438979|gb|ADK18745.1| Aspartyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 601

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 223/603 (36%), Positives = 327/603 (54%), Gaps = 13/603 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT   GD+    V   V L GWV + R  G +IF+D+RD  GI Q+V +   D     +
Sbjct: 3   KRTCYAGDVTAEYVDQEVTLKGWVQKRRSLGSLIFIDLRDREGIVQLVFSEEFDKDALAV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A SVRSE+V+ + G+V  R  + +N ++ TG +E+    I IL+ A+  P  +       
Sbjct: 63  ANSVRSEYVIEVQGVVKKRKPQAVNKDMKTGDVEVEVHTITILNKAKTPPFYIEDGVAVT 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  + KYR+LDLRR  + KNI  R  I+ S+   +    FI+  TP LTAS+PEGARD+L
Sbjct: 123 EETKLKYRYLDLRRPEMQKNIFTRAHIMRSVHHFLDDNGFIDVETPTLTASTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  GSFYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRVYPGSFYALPQSPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQP-EFTQIDLET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+  ++I +  E ++  V  +    + V   F RI + DA+ +YG+DKPDLR  + + +
Sbjct: 242 SFLTAEEIQDITEGLIAKVMHDVKGID-VKLPFDRITWQDAMDKYGSDKPDLRFDMQIQD 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V+E    S+F+VF+  +          +P      +R   D   ++ +  G  GLA++  
Sbjct: 301 VSELVKDSDFKVFAGAVQNGGQVRAIVLPGGADKYSRKMIDAQQDYIKRFGAKGLAWLKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK         +   +    GD   F+A             R H  
Sbjct: 361 TSD-----GISGPIAKFFGDG--ADLVKAVGANAGDLVLFVADKAKVVADALGYLRTHFG 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+   F FCW++D+P +E++E  ++   AH+PFTMP      L   D  +  A  
Sbjct: 414 HDLGLIDEQAFRFCWVVDWPLFEYDEGIQRWVPAHHPFTMPNEEDVHLLDTDPHAAHAQS 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  E+  +    +G + E  +  FG L  A   G PPHGG+A 
Sbjct: 474 YDIVLNGYELGGGSIRIHNREIQEKMLKALGFTPERAQKSFGFLLNALDYGFPPHGGLAI 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE--NPKKIL 599
           G+DR VMLL G  N+R+V  FP +    + +  +P  V+  QL++LG+ +    +P+K  
Sbjct: 534 GLDRFVMLLTGRDNIRDVIAFPKNSKASEPMTSAPYPVADAQLKDLGIEVRADVDPEKEH 593

Query: 600 KIS 602
           +  
Sbjct: 594 EGD 596


>gi|221200073|ref|ZP_03573116.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221206774|ref|ZP_03579786.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221211255|ref|ZP_03584234.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221168616|gb|EEE01084.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221173429|gb|EEE05864.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221180312|gb|EEE12716.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 600

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 226/599 (37%), Positives = 332/599 (55%), Gaps = 8/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQVKGLVRNRPEGTVNAGLKSGKIEVLCHELNVLNPSITPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KG   +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGAELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   +DGD  FF A             R  I   
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E+++E+ +   AH+PFT P+        +D     A
Sbjct: 421 EFGKANGLVEAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLESDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  +V  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREDVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+ +  +  
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQPA 599


>gi|294789544|ref|ZP_06754779.1| aspartate--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294482481|gb|EFG30173.1| aspartate--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 602

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 229/605 (37%), Positives = 345/605 (57%), Gaps = 12/605 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F++A 
Sbjct: 2   RTNYCGLINEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFKLAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S RSE+VL I G V +R   T N  +I+G+IE+ A++IEIL+ A   P     E    E+
Sbjct: 62  SARSEFVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEILNTAATPPFQ-IDEENISET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R + R +DLRR  + +N+  R ++   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLQNRVIDLRRPYMQRNLKLRYQVAMGVRRYLDVQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHAGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I++  E + + VF++    +    +F R+ Y DA+  YG+DKPD+R  +    +T
Sbjct: 240 LTENEIMDITEGMAKQVFKDALGVD--LGDFPRMQYSDAMFYYGSDKPDMRISLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR- 362
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DLMKTEEFKVFRGAADMKNGRVVALRVPNGAKFSRKEIDEYTQFVGIYGAKGLAYIKVND 357

Query: 363 ---LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              L    N     P+ K L+    + I  R   ++GD  FF A             R  
Sbjct: 358 VTNLSNGENSGLQSPIVKFLSENVLKEIIARTGAENGDIIFFGADKEKIVNEAIGALRIK 417

Query: 420 IAQELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           I +E G+ N    + ++  W++DFP +E++E+  +    H+PFT P+ G E L  +    
Sbjct: 418 IGKEHGLENGYFVDEWKPLWVVDFPMFEYDEDADRYVAVHHPFTAPKEGHEDLMVSAPEK 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G IR H +E+  + F+ + I+ E  + +FG L    + G PPH
Sbjct: 478 CLARAYDMVLNGWEIGGGSIRIHRAEIQEKVFAALKITPEEQQEKFGFLLDNLKFGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V L+  A+++R+V  FP +Q    LL  +P++V  +QLREL LR+     
Sbjct: 538 GGLAFGLDRLVTLMTSAESIRDVIAFPKTQRAQCLLTNAPNSVDEKQLRELSLRLRVKQS 597

Query: 597 KILKI 601
           +  + 
Sbjct: 598 ENKEA 602


>gi|229846405|ref|ZP_04466513.1| aspartyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229810498|gb|EEP46216.1| aspartyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 588

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 216/592 (36%), Positives = 332/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ + + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRVYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++ +    +     F  + + +A+ R+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHGLWLDTIGVD--LGKFPVMTWQEAMCRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVEFKVFNEPANNPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R++ Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWKPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFSLEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+  
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVKAE 588


>gi|225386911|ref|ZP_03756675.1| hypothetical protein CLOSTASPAR_00659 [Clostridium asparagiforme
           DSM 15981]
 gi|225046923|gb|EEG57169.1| hypothetical protein CLOSTASPAR_00659 [Clostridium asparagiforme
           DSM 15981]
          Length = 597

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 227/597 (38%), Positives = 350/597 (58%), Gaps = 11/597 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
            R+H C ++  +++G  V + GWV + R  GGIIF+D+RD  GI Q++          F 
Sbjct: 9   KRSHRCTEVTTANIGQDVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEESDCGAENFA 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ + G V +RS   +N N+ TG IE+ A+ + +LS +E  P P+    + 
Sbjct: 69  KAEKLRSEFVIAVTGRVEARSG-AVNQNLATGAIEVRAKSMRVLSESETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR  L +N++ R+R+    R  +  E F+E  TP L  S+PEGARD+
Sbjct: 128 KEELRLKYRFLDLRRPDLQRNMMVRSRVATLTRAFLADEGFLEIETPTLIKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ D++L+  E +L+ +F+E  + + +     R+ + +A+ R+G+DKPDLR  + + 
Sbjct: 247 LSFVDVDEVLDVNERLLQKLFKEICDYD-LPLPLPRMTWQEAMDRFGSDKPDLRFGMELQ 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+E     EF VF   L             +G    R   D + E+A+  G  GLAY+ 
Sbjct: 306 NVSEVVKGCEFAVFKNALESGGSVRGINAEGQG-HMPRKKIDALVEYAKGFGAKGLAYVA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             ++E G++      AK +      A+   +  + GD   F A           + R  +
Sbjct: 365 --INEDGSLK--SSFAKFMTEEEMGALVAAMGGKPGDLLLFAADRNKVVYDVLGNLRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L ++  + F+F W+ +FP  E++EEE +    H+PFTMP         +D   ++A 
Sbjct: 421 ARQLDLLKKDDFKFLWVTEFPLLEYSEEEGRFMAMHHPFTMPMDEDLQYIDSDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H  +V  + F  +G + E   ++FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGVEMGGGSVRIHQGDVQSKMFEVLGFTPERANDQFGFLLEAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G DR+VML++GA ++R+V  FP  ++   L+  +P+ V   QL+ELG+ + E  ++
Sbjct: 541 YGFDRMVMLMVGADSIRDVIAFPKVKDASCLMTEAPTPVDPAQLKELGIEVAETEEE 597


>gi|33591895|ref|NP_879539.1| aspartyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|33594835|ref|NP_882478.1| aspartyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|33599107|ref|NP_886667.1| aspartyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|46577213|sp|Q7W001|SYD_BORPE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|46577214|sp|Q7W275|SYD_BORPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|46577217|sp|Q7WR42|SYD_BORBR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33564911|emb|CAE39856.1| aspartyl-tRNA synthetase [Bordetella parapertussis]
 gi|33571539|emb|CAE41019.1| aspartyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|33575153|emb|CAE30616.1| aspartyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|332381312|gb|AEE66159.1| aspartyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 596

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 227/599 (37%), Positives = 338/599 (56%), Gaps = 10/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT   G +    +G  V L GWV+R R HGG+IF+D+RD  G+ Q+V +PD+   F  A+
Sbjct: 2   RTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRTGLAQIVFDPDNAEAFGTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I GLV  R   T NA + +G++E+  Q++EIL+ +   P  +  +    E+
Sbjct: 62  RLRNEFCISITGLVRLRPEGTANAELASGEVEVLCQQVEILNASVTPPFQLDDDNLS-ET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N++ R R+   +R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPQMQHNLMLRYRVSIEVRKYLDQLGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 181 SRVNAGYFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I    E ++R VF+   + + +   F  + + +A++RYG+DKPDLR  +   ++T
Sbjct: 240 LNEVEIREIFEGMIRHVFKVVQDVD-LPTPFPIMSWTEAMQRYGSDKPDLRVNLEFTDMT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF+   +      V      GG  +R+  D   ++    G  GLAYI    
Sbjct: 299 DVMRDVDFKVFASAATTAGSRVVALRVQGGGEMSRSEIDAYTQFVGIYGAKGLAYIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+L+      +  R   Q+GD  FF A             R  I   
Sbjct: 359 VAKGREGLQSPIVKNLHDAALAELVKRTGAQNGDIIFFGADRAKVVNDAIGALRVKIGHS 418

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              ++ G+ +   ++  W++DFP +E++EEE +   AH+PFT P+ G E    +D     
Sbjct: 419 EFGKKAGLFS-GGWKPLWVVDFPMFEYDEEENRYTAAHHPFTSPKDGHEDFLESDPGKAV 477

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R H  EV  + F  + I  E    +FG L  A Q G PPHGG
Sbjct: 478 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIDAEEAREKFGFLLDALQYGAPPHGG 537

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           IA G+DRI+ ++ GA+++R+V  FP +Q    LL G+PS V  +QLREL +R+     K
Sbjct: 538 IAFGLDRIITMMAGAESIRDVIAFPKTQRAQCLLTGAPSEVDEKQLRELHIRLRNVEVK 596


>gi|167561588|ref|ZP_02354504.1| aspartyl-tRNA synthetase [Burkholderia oklahomensis EO147]
 gi|167568824|ref|ZP_02361698.1| aspartyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 600

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 227/597 (38%), Positives = 329/597 (55%), Gaps = 8/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + I GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCIQIKGLVRGRPEGTINAGLKSGKIEVLCHELNVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +    +  F  + + +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVELAAK-FPVMPHSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KG    R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGAELTRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   +DGD  FF A             R  I   
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E+++E+ +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVEAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  +V  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREDVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+ +  +
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|198282205|ref|YP_002218526.1| aspartyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218666964|ref|YP_002424570.1| aspartyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|226735097|sp|B7J3F7|SYD_ACIF2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238690898|sp|B5EJL3|SYD_ACIF5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|198246726|gb|ACH82319.1| aspartyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218519177|gb|ACK79763.1| aspartyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 596

 Score =  626 bits (1614), Expect = e-177,   Method: Composition-based stats.
 Identities = 234/590 (39%), Positives = 341/590 (57%), Gaps = 5/590 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH C  +    +G  V L GW  R R HGG+IF+D+RD  G+ Q+VA+PD    F  A 
Sbjct: 2   RTHYCNGIHEGLIGQTVTLCGWAQRRRDHGGVIFIDLRDREGLVQIVADPDQVDAFAAAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             RSE+VL ++G++ +R A T N ++ +G++EL+A +I IL+ +E +P P   E +  E+
Sbjct: 62  ECRSEFVLQVEGVLRARPAGTENPHMPSGKVELAAARIRILNRSEPVPFP-LDEEDIAEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  +   +  R ++   +R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 LRLKYRYLDLRRPEMLHRLRLRHQVTRFVRGYLDNAGFIDVETPVLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR   G F+ALPQ+PQ +KQLLM +G DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRTQPGHFFALPQSPQLFKQLLMVAGLDRYYQITKCFRDEDLRADRQP-EFTQIDIEASF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+++ ++ T E ++RG+F E      + + F R+ Y DA+ R+G D+PDLRNP+ +  +T
Sbjct: 240 VDEEAVMGTAEPMIRGLFAEVLGVQ-LPDPFPRMTYRDAMHRFGVDRPDLRNPLELTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF +      G         G   +RA  D   ++    G  GLA+I    
Sbjct: 299 DLMRAVDFKVFREAAERPHGRVACLRVPGGAQLSRAQIDAYTQFTAIYGARGLAWIKVNA 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + GN     P+ K L  +    I  R     GD  FF A           + RN +A +
Sbjct: 359 LDQGNEGLQSPIVKFLPEMVLSEILRRSGAAAGDILFFGADTAKIVNEALGNLRNRVAAD 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG++    +   WI DFP ++++++E +    H+PFT PQ       G D  +  A  YD
Sbjct: 419 LGLL-EGEWCPVWITDFPMFDYDDKEDRWTSTHHPFTAPQTEHLETLGQDPGNALARAYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG EI  G IR H   V  + F+ +GI  E   ++FG L  A   G PPHGG+A G+
Sbjct: 478 LVLNGNEIGGGSIRIHQEAVQEKVFAALGIGAEEARDKFGFLLDALHYGAPPHGGLAFGL 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           DR+VMLL GA+ +R+V  FP +Q    LL  +P TV+ +QL+ELG+R+  
Sbjct: 538 DRLVMLLCGAETIRDVIAFPKTQKAGCLLTEAPGTVADKQLQELGIRLRP 587


>gi|119492409|ref|ZP_01623730.1| Aspartyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119453075|gb|EAW34244.1| Aspartyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 600

 Score =  626 bits (1614), Expect = e-177,   Method: Composition-based stats.
 Identities = 241/602 (40%), Positives = 355/602 (58%), Gaps = 17/602 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG L  +D+G  V L GWV R R HGG+IFLD+RD +G+ Q+V++P      + IA
Sbjct: 2   RTHYCGQLRSTDIGKTVTLCGWVDRRRDHGGVIFLDLRDRHGLVQIVSDPQRTPDSYHIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
           +S+R+E+V+ I G V  R  E++N  + TG++E+ A KIE+L+         +       
Sbjct: 62  ESLRNEYVVRITGRVSQRPDESLNPKLATGEVEIYADKIELLNALGKQLPFQISTAEPES 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R +YR+LD+RRD + +N+  R  ++ +MR  +   E+FIE  TPILT S+PEGAR
Sbjct: 122 VKEELRLRYRYLDIRRDRMTRNLQLRHAVVKAMRRFLEDQEHFIEIETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+++PSRVN G ++ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYVLPSRVNPGEWFALPQSPQLFKQLLMVSGMDRYYQIAHCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ Q++IL   E ++  +F+     + +   F R+ Y +A+ RYG+DKPD R  + 
Sbjct: 241 MEMSFMSQEEILALNEALVAHIFKAVKGID-LPLPFPRLTYAEALNRYGSDKPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V++      F+VFS  +      ++  IP      +         + + A   G  G
Sbjct: 300 LVDVSDLVKDCGFKVFSGAVKSGGIVKILPIPGGNEAFSNVRIKPGGDLFKEASEAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI  R+ E G +  +G +  +L+    + I  R   + G    F AG+          
Sbjct: 360 LAYI--RVKEGGKLDTIGAIKDNLSEDQKQEILKRTQAKPGFLLLFGAGETNTVNKTLDR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  + +ELG+I  +   F W+ DFP +EWN +EK+++  H+PFT P     +    DL 
Sbjct: 418 LRLVVGEELGLIAKDQTNFLWVTDFPMFEWNADEKRLEALHHPFTAPHPDDLA----DLK 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NG+EI  G +R +  +V  + F  +G+S E   N+FG L  AF+ G PP
Sbjct: 474 TARALAYDLVLNGYEIGGGSLRIYQRDVQEKVFETIGLSIEEAFNKFGFLLEAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +PS V  +QL+EL +     P
Sbjct: 534 HGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQARCLLTNAPSKVEDKQLKELHVASTYKP 593

Query: 596 KK 597
           KK
Sbjct: 594 KK 595


>gi|254251438|ref|ZP_04944756.1| Aspartyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124894047|gb|EAY67927.1| Aspartyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 600

 Score =  626 bits (1614), Expect = e-177,   Method: Composition-based stats.
 Identities = 226/597 (37%), Positives = 332/597 (55%), Gaps = 8/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQVKGLVRNRPEGTVNAGLKSGKIEVLCHELTVLNPSVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMIANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F++  +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKKTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KG   +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGAELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   +DGD  FF A             R  I   
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E+++E+ +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVEAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  +V  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREDVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+ +  +
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|229515548|ref|ZP_04405007.1| aspartyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229347317|gb|EEO12277.1| aspartyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 591

 Score =  626 bits (1614), Expect = e-177,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 329/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVD--LGDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLLKEVDFKVFSGPANDPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L     +AI  R   Q GD   F A             R    +E
Sbjct: 357 LAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LGI N + +   W++DFP +E + +E  +   H+PFT P          +     +  YD
Sbjct: 417 LGITNESAWAPLWVVDFPMFEGD-DEGNVAAMHHPFTSPLNLTPEQLKANPEEALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +    K
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAVKLATK 588


>gi|218291279|ref|ZP_03495255.1| aspartyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218238827|gb|EED06039.1| aspartyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 600

 Score =  626 bits (1614), Expect = e-177,   Method: Composition-based stats.
 Identities = 235/597 (39%), Positives = 344/597 (57%), Gaps = 12/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSAC 58
           R+RTH   D       S VRL+GWV R R  G ++F+D+RD  GI Q+V +         
Sbjct: 11  RWRTHWVADTVRVQPKSEVRLAGWVQRRRDLGSVVFVDLRDRTGIVQLVFDRARGTSDEA 70

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E+A  +RSE+V+ +DG V  R  +T+N  I TG+IE+      I S A+  P  +    
Sbjct: 71  MEVADRLRSEYVIVVDGTVEKRDPDTVNPKIETGEIEVVVTSARIESAAKTPPFYIEDGI 130

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E +R +YR+LDLRR  + +    R + I + R  +    F+E  TP+LT S+PEGAR
Sbjct: 131 QVEEPVRLRYRYLDLRRPEMQRIFALRHQAIRAFRRYLDDHGFLEIETPMLTKSTPEGAR 190

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR+  G FYALPQ+PQ +KQLLM +GF+RY+Q+A CFRDED R+DR P EF QLD
Sbjct: 191 DYLVPSRLQPGEFYALPQSPQIFKQLLMVAGFERYYQVARCFRDEDLRADRQP-EFTQLD 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +D++++ ME+++  VF+E +    V   FLR+ Y +A+ +YG+DKPDLR  + 
Sbjct: 250 IETSFLPKDELMSMMEDMMASVFKEVAGIE-VPRPFLRLPYQEAMDKYGSDKPDLRFGME 308

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M ++ + F  + FRVF+ +L      +    P      +R   D +  + +  G  GLAY
Sbjct: 309 MADLADLFEGTSFRVFADVLEKGGVIKALVAP-GCASYSRKQTDDLVAFVKPYGLGGLAY 367

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  + D          +AK     +   I  R   + GD     AG            R 
Sbjct: 368 VAVQED-----GFKSSIAKFFTDDDFRRIADRAGAKVGDLVLIGAGPRETVLPAMGALRL 422

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           H+ QELG+I+ + + F W+ DFP   W+EEEK+    H+PFTMP+     L   D   ++
Sbjct: 423 HLGQELGLIDESQYRFLWVTDFPLLSWDEEEKRWVAEHHPFTMPREEDIPLLDTDPGRVR 482

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  +V  + F+ +G S E  + +FG L  AF+ G PPHGG
Sbjct: 483 AQAYDMVLNGYEIGGGSMRIYRRDVQEKMFAALGFSPEEAQEKFGFLLNAFEYGTPPHGG 542

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRI+MLL GAK++R+V  FP + +  DL++G+PS VS  QL  L LR+ +  
Sbjct: 543 IAFGLDRIIMLLTGAKSLRDVIAFPKTASGTDLMVGAPSEVSEAQLEVLHLRVRKTK 599


>gi|256959283|ref|ZP_05563454.1| aspartyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300860591|ref|ZP_07106678.1| aspartate--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|256949779|gb|EEU66411.1| aspartyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300849630|gb|EFK77380.1| aspartate--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|315034525|gb|EFT46457.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0027]
          Length = 589

 Score =  626 bits (1614), Expect = e-177,   Method: Composition-based stats.
 Identities = 228/591 (38%), Positives = 334/591 (56%), Gaps = 10/591 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
            RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+     +EI
Sbjct: 3   KRTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A   RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    
Sbjct: 63  ADKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVN 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+L
Sbjct: 123 DELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F+  ++I    EN+L  V +E       S  F R+CYD+A+ RYG+DKPD R  + + +
Sbjct: 242 TFLTPEEIQTYTENMLAEVMKETKGIEI-SVPFPRMCYDEAMARYGSDKPDTRFAMELID 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V E     +F+VF   L      +           +R   D + ++    G  GLA++  
Sbjct: 301 VAEVVKDVDFKVFQAALENGGHVKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWLKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK L    ++ +    + + GD   F A  P    +     R  + 
Sbjct: 361 EED-----GLKGPIAKFLT-EVSDELIAATNAEVGDILMFGADKPEIVAAALGAVRTRLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+    +    D  S+ A  
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAEA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA 
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIAL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 535 GLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|160875535|ref|YP_001554851.1| aspartyl-tRNA synthetase [Shewanella baltica OS195]
 gi|304408867|ref|ZP_07390488.1| aspartyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307302870|ref|ZP_07582625.1| aspartyl-tRNA synthetase [Shewanella baltica BA175]
 gi|189082141|sp|A9L3I1|SYD_SHEB9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|160861057|gb|ABX49591.1| aspartyl-tRNA synthetase [Shewanella baltica OS195]
 gi|304352688|gb|EFM17085.1| aspartyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306913230|gb|EFN43652.1| aspartyl-tRNA synthetase [Shewanella baltica BA175]
 gi|315267723|gb|ADT94576.1| aspartyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 592

 Score =  626 bits (1614), Expect = e-177,   Method: Composition-based stats.
 Identities = 220/594 (37%), Positives = 331/594 (55%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLIQVVYDPDLPEVFNVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + GLV +R    +N  + TG+IE+  Q + I++ A+ LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGLVRARPDSQVNGQMKTGEIEVLGQALTIINAADPLPLSMDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +S+R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLIFRAKVTSSVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + ++ 
Sbjct: 241 MSSEQVMAKTEEMMRGLFLEMLNVDLGE--FPRMTYNEAMRRFGSDKPDLRNPLELVDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DLLKEVEFAVFSGPANDEEGRVAALRIPGGAALSRKQIDDYTKFVGIYGAKGLAWMKIND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PV K LN      I  R   Q GD   F A             R    ++
Sbjct: 359 LSLGLEGIQSPVLKFLNESIVNEIVSRTAAQTGDIILFGADQATVVAESMGALRLKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    +   W++DFP +E           H+PFT P+G   +    +  +  +  YD
Sbjct: 419 FNLLQ-GEWRPLWVVDFPMFEKI--NGNFHAVHHPFTAPRGVTAAELEANPANRVSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  E+    F  +GI+ E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +VE   K
Sbjct: 536 DRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVEKAVK 589


>gi|157693160|ref|YP_001487622.1| aspartyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157681918|gb|ABV63062.1| aspartate--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 594

 Score =  626 bits (1614), Expect = e-177,   Method: Composition-based stats.
 Identities = 232/596 (38%), Positives = 345/596 (57%), Gaps = 10/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG++    +G  V L GWV + R  GG+IF+D+RD  GI Q V NPD      E A
Sbjct: 6   RTFYCGEVTEDQIGQTVVLKGWVQKRRDLGGLIFIDLRDRTGIVQAVFNPDLSKEALETA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP 121
           +S+R+E+VL I G V++R   TIN N+ TG+IE+  + + +L+ A+  P  +  +  E  
Sbjct: 66  ESIRNEYVLDIKGTVVAREEATINPNLKTGKIEIQVETVSVLNEAKTPPFVISDQADEVS 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  + + +  R  +  + R  +    F++  TPILT S+PEGARD+L
Sbjct: 126 EDVRLKYRYLDLRRPAMFETMKMRHEVTRAFRHFLDDNGFLDIETPILTKSTPEGARDYL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 186 VPSRVHEGEFYALPQSPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQP-EFTQVDIEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ Q+DI+   E ++  V ++    + ++    R+ YD+A+  YG+DKPD R  + + N
Sbjct: 245 SFMSQEDIMTLAEEMMAKVMKDVKGVD-LTLPLPRMTYDEAMNSYGSDKPDTRFEMKLVN 303

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    S+F+VFS  +      +   +       +R   D +  +A + G  GLA++  
Sbjct: 304 ISDTVKDSDFKVFSGAVKNGGAVKAINVKGAAANYSRKDIDALGAFAANYGAKGLAWLK- 362

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
               +      GP+AK  +      ++ +L +++GD   F+A             R  + 
Sbjct: 363 ----AEGSELKGPIAKFFDEAKQGELKEKLQVEEGDLLLFVADKTSVVHDALGALRLKLG 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL +I+ + F F W++D+P  E +EEE +   AH+PFTMP      L       +KA  
Sbjct: 419 KELELIDESRFNFLWVVDWPLLEKDEEEGRFYAAHHPFTMPVRDDLELIETSPEDMKAQA 478

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+  G IR    ++  + FS +G SKE    +FG L  AF+ G+PPHGGIA 
Sbjct: 479 YDLVLNGYELGGGSIRIFEKDIQEKMFSLLGFSKEEAYEQFGFLLDAFEHGVPPHGGIAL 538

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VMLL G  N+R+   FP + +   +L  +P  VS  QL EL L I    K+
Sbjct: 539 GLDRLVMLLAGRSNLRDTIAFPKTASASCVLTDAPGHVSEAQLDELSLAIKTKVKQ 594


>gi|262171801|ref|ZP_06039479.1| aspartyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261892877|gb|EEY38863.1| aspartyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 590

 Score =  626 bits (1614), Expect = e-177,   Method: Composition-based stats.
 Identities = 222/595 (37%), Positives = 330/595 (55%), Gaps = 7/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD +  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N ++ TG++EL A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKDMATGEVELLARGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVD--LGDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLLKDVDFKVFSGPANDPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L     +AI  R   Q GD   F A             R    +E
Sbjct: 357 LAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LGI N + +   W++DFP +E + +E  +   H+PFT P          +     +  YD
Sbjct: 417 LGITNESAWAPLWVVDFPMFEGD-DEGNVAAMHHPFTSPLNLTPEQLKANPEEALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRIKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +     K 
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAVKLAKDKA 590


>gi|313618813|gb|EFR90703.1| aspartyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 591

 Score =  626 bits (1614), Expect = e-177,   Method: Composition-based stats.
 Identities = 228/597 (38%), Positives = 336/597 (56%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNETHIGQSVILHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +    
Sbjct: 60  LEIADSVRNEFVVTIKGKVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +++I    E++L  V +E  N       F R+ Y +A+ R+G+DKPD+R  + 
Sbjct: 239 LETSFLTKEEIQAITEDMLVDVVKEAKNITI-EKPFPRMTYKEAMDRFGSDKPDIRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + NV+E     +F+VF   +      +     A     +R   D +  +  + G  GLA+
Sbjct: 298 LQNVSEVVKDVDFKVFQSAIENGGEVKAINAKAAATNFSRKDLDALGVFVANYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E+G +   GP+AK         ++  L  +DGD   F A       +     RN
Sbjct: 358 LKV---EAGELK--GPIAKFFPEDKATELQAALQAEDGDLLLFAADKADIVAASLGALRN 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++L +IN +   F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + 
Sbjct: 413 KLGKDLDLINEDELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVM 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGG
Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMEALEYGTPPHGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 533 IALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSAAQLAELKLETVKKE 589


>gi|218132937|ref|ZP_03461741.1| hypothetical protein BACPEC_00798 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991810|gb|EEC57814.1| hypothetical protein BACPEC_00798 [Bacteroides pectinophilus ATCC
           43243]
          Length = 612

 Score =  625 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 226/596 (37%), Positives = 344/596 (57%), Gaps = 11/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFE 60
            RT+ C ++G +D+G  V + GWV + R  G +IF+D+RD  G+ Q++ + ++     FE
Sbjct: 22  KRTNRCAEVGTADIGREVTVMGWVQKRRNLGSLIFVDLRDRSGLLQILFDENNIGTEGFE 81

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A S+RSE+V+ + G +  RS   +N N+ TG IE+ A  + ILS A+  P P+  +   
Sbjct: 82  KASSLRSEYVIAVTGKIAKRSG-AVNENLKTGDIEVIATDLRILSEAQTPPFPIEADSNT 140

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  +  NI+ R+R+    R  +  E F+E  TP+L  S+PEGARD+
Sbjct: 141 KEDLRLKYRYLDLRRPDIQANIMMRSRVATLTRAFLANEGFLEIETPMLCKSTPEGARDY 200

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ YKQLLM SG+DRY QIA CFRDED R+DR P EF Q+DME
Sbjct: 201 LVPSRVHPGHFYALPQSPQLYKQLLMCSGYDRYMQIARCFRDEDLRADRQP-EFTQIDME 259

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E +L  +F+E  N + V     R+ + +A+ R+G+DKPDLR  + +H
Sbjct: 260 LSFVDIDDVIDVNERLLAYLFKEVLNVD-VQLPIQRMTWQEAMDRFGSDKPDLRFGMELH 318

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++      F VF+  +             +G    R   D + ++A+  G  GLAYI 
Sbjct: 319 DVSDVVKGCGFGVFTGAIENGGSVRGINAKGQG-AMPRKKIDALVDFAKGYGAKGLAYIA 377

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D           AK +     +A+   ++ + GD   F A       +     R  +
Sbjct: 378 INEDG----TYKSSFAKFMTDDEMKALVTAMEGEPGDLLLFAADRNKIVWNVLGALRIEL 433

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ++G+++ N ++F W+ +FP +EW++EE +    H+PFTMP          DL +++A 
Sbjct: 434 AGQMGLLDKNEYKFLWVTEFPQFEWSDEENRYVAMHHPFTMPMEEDLDKLDTDLGAVRAK 493

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H  +V  + F  +G + E    +FG L  AF+ G+PPH G+A
Sbjct: 494 AYDIVLNGTEIGGGSVRIHQEDVQERMFRALGFTNEEAHEKFGFLLDAFKYGVPPHAGLA 553

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VML+    ++R+V  FP  ++   L+  +P TV  +QL EL L I    +
Sbjct: 554 YGLDRLVMLMAKCDSIRDVIAFPKVKDASCLMTEAPGTVDAKQLEELSLDIAAAEQ 609


>gi|206559273|ref|YP_002230034.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|238693095|sp|B4EBD1|SYD_BURCJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|198035311|emb|CAR51186.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 600

 Score =  625 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 227/598 (37%), Positives = 333/598 (55%), Gaps = 10/598 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + I GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQIKGLVRNRPEGTVNAGLKSGKIEVLCHELNVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVQLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGGELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+L+  +  AI  R   +DGD  FF A             R  I   
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +  G++    ++  W++DFP +E+++E+ +   AH+PFT P+         D     
Sbjct: 421 EFGKANGLVQAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCL 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+ +  +
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|126174260|ref|YP_001050409.1| aspartyl-tRNA synthetase [Shewanella baltica OS155]
 gi|166225426|sp|A3D477|SYD_SHEB5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|125997465|gb|ABN61540.1| aspartyl-tRNA synthetase [Shewanella baltica OS155]
          Length = 592

 Score =  625 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 220/594 (37%), Positives = 331/594 (55%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLIQVVYDPDLPEVFNVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + GLV +R    +N  + TG+IE+  Q + I++ A+ LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGLVRARPDSQVNGQMKTGEIEVLGQALTIINAADPLPLSMDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +S+R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLIFRAKVTSSVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + ++ 
Sbjct: 241 MSSEQVMAKTEEMMRGLFLEMLNVDLGE--FPRMTYNEAMRRFGSDKPDLRNPLELVDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DLLKEVEFAVFSGPANDEEGRVAALRIPGGAALSRKQIDDYTKFVGIYGAKGLAWMKIND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PV K LN      I  R   Q GD   F A             R    ++
Sbjct: 359 LSLGLEGIQSPVLKFLNDSIVNEIVSRTGAQTGDIILFGADQATVVAESMGALRLKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    +   W++DFP +E           H+PFT P+G   +    +  +  +  YD
Sbjct: 419 FSLLQ-GEWRPLWVVDFPMFEKI--NGNFHAVHHPFTAPRGVTAAELEANPANRVSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  E+    F  +GI+ E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +VE   K
Sbjct: 536 DRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVEKAVK 589


>gi|51244422|ref|YP_064306.1| aspartyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|62287551|sp|Q6AQS4|SYD_DESPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|50875459|emb|CAG35299.1| probable aspartyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 607

 Score =  625 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 235/589 (39%), Positives = 342/589 (58%), Gaps = 9/589 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTH C  L   D+G  V L GWV R R HGG+IF+D+RD  GITQVV NP+        
Sbjct: 21  KRTHFCDALRKEDIGKQVILMGWVLRRRDHGGVIFIDLRDRRGITQVVFNPEINPEVHAK 80

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+RSEWVL I G V +R  +  N  + TG IE+   ++ IL+ +E  P P+  E E  
Sbjct: 81  AHSLRSEWVLAIKGTVSARPGDMANTKLGTGDIEILVDELVILNTSETPPFPLDEETEVS 140

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R +YR+LDLRR  + +N++ R + + ++R  +    F++  TP+LT S+PEGARD+L
Sbjct: 141 ENLRLQYRYLDLRRPAMARNLLLRHKAVQAIRNYLNDNEFLDIETPMLTRSTPEGARDYL 200

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM +G DRY+QI  CFRDED R+DR P EF Q+DME+
Sbjct: 201 VPSRVSAGKFYALPQSPQLFKQLLMIAGMDRYYQIVKCFRDEDLRADRQP-EFTQIDMEL 259

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++ I+   E +++ +F+E  + + ++  F  I Y D++ R+G D+PD+R  + + N
Sbjct: 260 SFVDEEQIIEVTEGMIQTLFKETLDLD-LTPPFAHITYADSMERFGCDRPDMRFGMELVN 318

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE      F+VF  I             A     +R   D + E+A   G  GLA++  
Sbjct: 319 LTEIAKSCSFKVFRAIAEEGGTVRAINAKAC-AHFSRKDLDGLTEYAALFGAKGLAWVKM 377

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D         P+AK  +     +I   LD Q+GD  FF A           + R  +A
Sbjct: 378 KADG----EWQSPIAKFFSEEERASIAEALDAQEGDLLFFGADSEKVVFQVLGELRLEMA 433

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L +++   F F W+ DFP  E++E+E +    H+PFT P+     L         +  
Sbjct: 434 RRLDLLDKKEFNFVWVTDFPLMEYDEKEDRYQSIHHPFTAPREEDLDLLETAPDKALSRA 493

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  +V  +  + +GI KE  + +FG L RA + G PPHGG+A 
Sbjct: 494 YDLVLNGTEIGGGSIRIHQRDVQARVLTALGIDKEEADEKFGFLLRALELGAPPHGGLAF 553

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR++ML+ G+ ++R V  FP +Q    LL  +P+TV+ +QL EL LR
Sbjct: 554 GLDRLMMLITGSDSIRNVIAFPKTQKAACLLTEAPATVARKQLTELYLR 602


>gi|328676200|gb|AEB27070.1| Aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase
           [Francisella cf. novicida Fx1]
          Length = 590

 Score =  625 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 346/595 (58%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 2   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 62  LRSEFVIKAEGVVNLRPEGQENKNIASGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E       +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 241 DEAFIMSTMERMIAGLFKETIGVEF-ATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + +F+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 300 DMQNEDFKVFSGP-ANDPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 359 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E ++   ++   H+PFT P+   +E L   +   + +  
Sbjct: 419 DLDLFNKD-WAPLWVVDFPMFEKDD--NRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS E    +FG +  A   G P HGGIA 
Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ + +  +
Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAVKKEER 590


>gi|330445529|ref|ZP_08309181.1| aspartyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489720|dbj|GAA03678.1| aspartyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 596

 Score =  625 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 215/601 (35%), Positives = 329/601 (54%), Gaps = 7/601 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD +  F +A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVIDPDMTEIFTLAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V  R     N ++ TG++EL A  +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRNEFCIRLTGEVRERPESQCNKDMATGEVELYATGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNAFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G+FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGNFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++    E ++  +++E  N +     F  + +++A RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEEVRAVTEKMITEMWKEILNVD--LGTFPIMSFEEAARRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DIVKDVDFKVFSGPANDEKGRVAVIRVPGGAELSRKQIDEYTKFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN      +  R   + GD   F A             R  + ++
Sbjct: 357 RAAGFEGVQSPVAKFLNEEVVANLLERTQAESGDIILFGADSKRVVTEAMGALRLKLGED 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + ++  W++DFP +E NE+   +   H+PFT P          +  +  +  YD
Sbjct: 417 LGLTDKSAWKPLWVVDFPMFEENED-GSLSAMHHPFTSPLNLTPEELAANPAAALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H SE+    F  +GI  +    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNSEMQSTVFDILGIDADEQRLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISV 603
           DR+VMLL G  N+R+V  FP +     LL  +PS  +   L EL + +    K+      
Sbjct: 536 DRLVMLLCGTDNIRDVIAFPKTTAAACLLTDAPSLANPAALEELSIAVKIAKKEEEAKDA 595

Query: 604 T 604
            
Sbjct: 596 E 596


>gi|116750723|ref|YP_847410.1| aspartyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116699787|gb|ABK18975.1| aspartyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 613

 Score =  625 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 238/592 (40%), Positives = 344/592 (58%), Gaps = 10/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           +THSC  LG   VG  V L GWV R R HGG+IF+D+RD  G+TQVV +P  D+   E A
Sbjct: 27  KTHSCNSLGRGHVGETVVLMGWVQRRRDHGGLIFVDLRDREGLTQVVFDPQFDAVAHEHA 86

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+RSE+V+ + G V  R     N  ++TG+IE+  ++++IL+ ++  P  V  + E  E
Sbjct: 87  HSLRSEYVIAVTGTVRPRPEGMTNPRLVTGEIEVITRELKILNSSKTPPFHVEDDVEASE 146

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR +YR++DLRR  +  N++ R R +   R       F+E  TP+LT S+PEGARD+LV
Sbjct: 147 NIRLRYRYIDLRRPRMFHNLLLRHRAVQLTREYFNGAGFLEVETPVLTKSTPEGARDYLV 206

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQ+LM +GF+RY+QI  CFRDED R+DR P EF QLD+EMS
Sbjct: 207 PSRVNPGKFYALPQSPQLFKQILMVAGFERYYQIVKCFRDEDLRADRQP-EFTQLDLEMS 265

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV ++ I   +E+ +R + +E          F R+ Y +A+R YGTD+PD R  +++ +V
Sbjct: 266 FVNEEHIYELIESWIRLLMKELLGVEMAP-PFPRMSYAEAMRLYGTDRPDTRFGLLLTDV 324

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+    SE RVF + +  N   +   +P  GGG +R   D + E+ +  G  G+A+I  +
Sbjct: 325 TDIVADSELRVFRQAVERNGIVKALRVP-GGGGLSRKDLDDLTEYVKIFGAQGMAWIRIQ 383

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                      P+AK L     E +  RL++++GD   F+A           + R  +  
Sbjct: 384 -----PEGWQSPIAKFLQESVRERLAERLEIENGDIVMFLADQGKVVNDALGNLRVRLGN 438

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +I+   + F W+  FP  EW+ EEK+    H+PFT P      L       +++  Y
Sbjct: 439 QLELIDPGSYNFVWVSHFPLLEWDAEEKRYTAVHHPFTSPIEEDVPLLREHPEQVRSRAY 498

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG EI  G IR H  E+    F  +GI +E    +FG L  A Q G PPHGGIA G
Sbjct: 499 DLVLNGIEIGGGSIRIHRQELQELVFGALGIGREEAAEKFGFLLEALQYGAPPHGGIAFG 558

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+VMLL G+ ++R+V  FP +Q    L+ G+PS   + QL EL +R+   
Sbjct: 559 VDRLVMLLSGSTSIRDVIAFPKTQKATCLMSGAPSEPELRQLLELCVRVESE 610


>gi|260912897|ref|ZP_05919382.1| aspartate-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260632887|gb|EEX51053.1| aspartate-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 598

 Score =  625 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 223/597 (37%), Positives = 338/597 (56%), Gaps = 7/597 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFE 60
           H  RTH CG L   ++G  V+LSGWVHR R  GG+IF+D+RD  GI QV  +P       
Sbjct: 8   HMMRTHYCGALNSHNIGQEVKLSGWVHRRRDLGGLIFIDMRDREGIVQVYFDPKYQEALN 67

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +R+E+ + I G V++R    IN N+ TG+IE+ A+ + I + AE   LP+   +  
Sbjct: 68  AAAGLRNEFCIQIQGEVIARPENQINKNMATGEIEVLAKSLSIYNTAES--LPLDFNQNN 125

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+
Sbjct: 126 TEEQRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDY 185

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 186 LVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVE 244

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+   ++   ME ++RG++ + +  +     F  + + DA+RR+G+DKPDLRNP+ M 
Sbjct: 245 TSFLTASEVREIMEKMVRGLWLDIAGVD--LGKFPVMTFADAMRRFGSDKPDLRNPLEMV 302

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V +     EF+VF+   +   G         G    R   D   ++    G  GLA++ 
Sbjct: 303 DVADLLKEVEFKVFNGPANDPNGRIAVIRVPNGTDITRKQIDEYTQFVSIYGAKGLAWLK 362

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                +G      P+AK L+    +A+  R+  Q+GD  FF A             R  +
Sbjct: 363 VNDLAAGMEGIQSPIAKFLSENVLKALLERVQAQNGDILFFGADTYKVTTDAMGALRLKL 422

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++LG+   + ++  W++DFP +E ++E   +   H+PFT P+         D  S  A 
Sbjct: 423 GRDLGLTKLDEWQPLWVIDFPMFERDDEAG-LAAMHHPFTSPRDFSPEQLEADPTSAVAN 481

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R    ++    FS +GI++E    +FG L  A + G PPH G+A
Sbjct: 482 AYDMVINGYEVGGGSVRIFEPKMQQAVFSILGINEEEQREKFGFLLDALKFGTPPHAGLA 541

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+ MLL G  N+R+V  FP +     L+  +PS  + + L EL + +++  K+
Sbjct: 542 FGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTDAPSYANPQALNELAISVIKELKE 598


>gi|134296922|ref|YP_001120657.1| aspartyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166225331|sp|A4JHR9|SYD_BURVG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|134140079|gb|ABO55822.1| aspartyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 600

 Score =  625 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 229/597 (38%), Positives = 332/597 (55%), Gaps = 8/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRGEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + I GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQIKGLVRNRPEGTVNAGLKSGKIEVLCHELIVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGGELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   +DGD  FF A             R  I   
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E+++E+ +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVEAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+ +  +
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|260582585|ref|ZP_05850375.1| aspartyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094396|gb|EEW78294.1| aspartyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 588

 Score =  625 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 216/592 (36%), Positives = 332/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++  ++ +    +     F  + + +A+ R+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAREVREIMERMVHDLWLDTIGVD--LGKFPVMTWQEAMCRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVEFKVFNEPANNPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R++ Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+        +D  S  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFSPEQLESDPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+  
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVKAE 588


>gi|124266262|ref|YP_001020266.1| aspartyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|166225361|sp|A2SEP2|SYD_METPP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|124259037|gb|ABM94031.1| aspartyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 599

 Score =  625 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 234/596 (39%), Positives = 337/596 (56%), Gaps = 9/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GW HR R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 2   RTTYCGLVSEMLLGQTVTLMGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKAAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L I G V +R A T NAN+++G++EL   ++E+L+ +   P  +  +    E+
Sbjct: 62  GVRNEFCLKIVGKVRARPAGTENANLVSGKVELLCHELEVLNPSVTPPFQLDDDNLS-ET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + KN++ R R+   +R  + A  FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPAMQKNLILRYRVAMEVRKFLDANGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN+G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVNEGMFFALPQSPQLFKQLLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++++I    E ++R VF    N       +  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 240 LDEEEIRGMFEGMIRTVFRAVMNVELPG--YPVMKYAEAMHRFGSDKPDLRVKMEFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E     +F+VFS       G  V      GG  +R+  D   E+ +  G  GLA+I    
Sbjct: 298 EVMKDVDFKVFSAPAQAKGGRVVALRVPGGGEMSRSEIDGYTEFVKIYGAKGLAWIKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+      I  R   ++GD  FF A             R  I   
Sbjct: 358 ASKGREGLQSPIVKNLHDAAIAEIIARSGARNGDLLFFGADKAKVVNDAIGALRVKIGHS 417

Query: 423 ---ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
              + G +  + +   W++DFP +E +EE  +    HNPFT P+ G E L   D     A
Sbjct: 418 DFGKSGGLFEDKWAPLWVVDFPMFEHDEEGDRWAAVHNPFTAPKDGHEDLMDTDPGKCIA 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H +EV  + FS + I  +  + +FG L  A Q G PPHGG+
Sbjct: 478 KAYDMVLNGWELGGGSVRIHRAEVQSKVFSALKIGPDEAQLKFGFLLDALQYGAPPHGGL 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR+V L+  A ++R+V  FP +Q   DLL  +PS V  +QLREL +R+    
Sbjct: 538 AFGLDRLVTLMTKADSIRDVIAFPKTQRAQDLLTHAPSPVDEKQLRELHIRLRNPA 593


>gi|157962187|ref|YP_001502221.1| aspartyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189082143|sp|A8H549|SYD_SHEPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157847187|gb|ABV87686.1| aspartyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 597

 Score =  625 bits (1613), Expect = e-177,   Method: Composition-based stats.
 Identities = 219/595 (36%), Positives = 333/595 (55%), Gaps = 6/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  GI QVV +PD    F++A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+ + I GLV +R    INA++ TG++E+   ++ IL+ +  LP+ +   +   E 
Sbjct: 62  TLRSEFCVQIKGLVRARPDSQINADMRTGEVEILGLELTILNSSAPLPINMDKNQHNTEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   IV R+++ +++R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMADRIVFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +++  E ++RG+F+E  N +     F ++ +++A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MTSAQVMDKTEEMVRGLFKELLNVDLGE--FPKMTFEEAMRRFGSDKPDLRNPLELIDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DIVKEVEFAVFNGPANDPEGRVAVLSIPGGAKLSRKQLDEYAKYVTIYGAKGLAWMKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PV K L+     A+  R   Q GD   F A             R    ++
Sbjct: 359 LAQGMEGIQSPVLKFLSEDVVNALLERTGAQTGDLILFGADKANIVAEAMGALRLKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    ++  W++DFP +E   +   +   H+PFT P          + +   +  YD
Sbjct: 419 FDLLQ-GEWKPLWVVDFPMFERTSD-GGLHAMHHPFTAPSNMTPEELEANPIGAISDAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H S++    F  +GI+ E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVLNGCELGGGSVRIHDSKMQSAVFRILGINDEEASEKFGFLLEALRYGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           DRI+ML+ GA ++R+V  FP +      L  +P   +  QL ELG+ +VE   K 
Sbjct: 537 DRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLAELGVSVVEAEPKA 591


>gi|258515494|ref|YP_003191716.1| aspartyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779199|gb|ACV63093.1| aspartyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 608

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 226/590 (38%), Positives = 338/590 (57%), Gaps = 10/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
            RT+ C DL    VG  V L GWV + R HGG+IF+D+RD  G+ Q+V +PD     F  
Sbjct: 22  KRTNYCEDLNKQMVGQAVVLMGWVSKRRDHGGLIFVDLRDRSGLVQLVFSPDLAVDAFHK 81

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++R+E+VL I G +  R   T N N++TG+IE+   ++ IL+ A+  P  V    +  
Sbjct: 82  AEAIRNEYVLAIAGTIRPRPEGTENYNLVTGEIEVICHELRILNTAKTPPFYVEDGIDVD 141

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R +YR+LDLRR  + ++I  R +     R  +    F E  TP+LT S+PEGARD+L
Sbjct: 142 ENLRLRYRYLDLRRPEMQRSIYLRHKTSKVARDFLDENGFWEIETPMLTKSTPEGARDYL 201

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQ+LM +G +RYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 202 VPSRINPGKFYALPQSPQIFKQILMVAGMERYFQIVRCFRDEDLRADRQP-EFTQIDLEM 260

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ +D+L  ME ++  ++ E +  + +S  F R+ Y +AI R+G+DKPD R  + + +
Sbjct: 261 SFVDVEDVLLLMEKLVSRLYLETAGLDLIS-PFPRLTYQEAIDRFGSDKPDTRFGLELCD 319

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++  +   F+VFS  +      +       G   +R   D + ++A      GLAYI  
Sbjct: 320 LSDIALGCGFKVFSAAVKNGGQVKGINAKGCG-SLSRKEIDDLTKFAAIYRAKGLAYIIV 378

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                 +      +AK         I  R+  + GD   F+A             R H+A
Sbjct: 379 -----SDEGVKSVIAKFFTEEELNTIVSRMRGEPGDLLLFVADTSETVAGALGALRLHLA 433

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L II  N   F W+ DFP   ++ EEK+    H+PFT P+    +L   +   ++A  
Sbjct: 434 EMLNIIPENLNNFLWVTDFPLLAYDPEEKRYAAMHHPFTAPRDEDIALMETEPGKVRAKA 493

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR H  +V  + F+ +G+S EV   +FG +  AF+ G PPHGG A 
Sbjct: 494 YDLVLNGVEVGGGSIRIHRRDVQEKMFAAIGLSAEVAREKFGYMLEAFEFGTPPHGGFAF 553

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR++M+L G K++R+V  FP +Q+   L+  +PS V  +QL+EL ++I
Sbjct: 554 GFDRLIMILAGKKSIRDVIAFPKTQSATCLMTQAPSEVEDKQLKELHIKI 603


>gi|191638515|ref|YP_001987681.1| aspartyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|238693044|sp|B3WEM2|SYD_LACCB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|190712817|emb|CAQ66823.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Lactobacillus casei BL23]
 gi|327382551|gb|AEA54027.1| Aspartyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327385748|gb|AEA57222.1| Aspartyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 601

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 223/603 (36%), Positives = 328/603 (54%), Gaps = 13/603 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT   GD+    V   V L GWV + R  G +IF+D+RD  GI Q+V +   D     +
Sbjct: 3   KRTCYAGDVTAEYVDQEVTLKGWVQKRRSLGSLIFIDLRDREGIVQLVFSEEFDKDALAV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A SVRSE+V+ + G+V  R  + +N ++ TG +E+    I IL+ A+  P  +       
Sbjct: 63  ANSVRSEYVIEVQGVVKKRKPQAVNKDMKTGDVEVEVHTITILNKAKTPPFYIEDGVAVT 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  + KYR+LDLRR  + KNI  R  I+ S+   +    FI+  TP LTAS+PEGARD+L
Sbjct: 123 EETKLKYRYLDLRRPEMQKNIFTRAHIMRSVHHFLDDNGFIDVETPTLTASTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  GSFYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRVYPGSFYALPQSPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQP-EFTQIDLET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+  ++I +  E ++  V  +    + V   F RI + DA+ +YG+DKPDLR  + + +
Sbjct: 242 SFLTAEEIQDITEGLIAKVMHDVKGID-VKLPFDRITWQDAMDKYGSDKPDLRFDMQIQD 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V+E    S+F+VF+  +          +P      +R   D   ++ +  G  GLA++  
Sbjct: 301 VSELVKDSDFKVFAGAVQNGGQVRAIVLPGGADKYSRKMIDAQQDYIKRFGAKGLAWLKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D     +  GP+AK         +   +    GD   F+A             R H  
Sbjct: 361 TSD-----SISGPIAKFFGDG--ADLVKAVGANAGDLVLFVADKAKVVADALGYLRTHFG 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+   F FCW++D+P +E++E  ++   AH+PFTMP      L   D  +  A  
Sbjct: 414 HDLGLIDEQAFRFCWVVDWPLFEYDEGIQRWVPAHHPFTMPNEEDVHLLDTDPHAAHAQS 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  E+  +    +G + E  +  FG L  A   G PPHGG+A 
Sbjct: 474 YDIVLNGYELGGGSIRIHNREIQGKMLKALGFTPERAQKSFGFLLNALDYGFPPHGGLAI 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE--NPKKIL 599
           G+DR VMLL G  N+R+V  FP +    + +  +P  V+  QL++LG+ +    +P+K  
Sbjct: 534 GLDRFVMLLTGRDNIRDVIAFPKNSKASEPMTSAPYPVADAQLKDLGIEVRADVDPEKEH 593

Query: 600 KIS 602
           +  
Sbjct: 594 EGD 596


>gi|301155721|emb|CBW15189.1| aspartyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 588

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 212/592 (35%), Positives = 332/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT+ CG L  + +G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTYYCGALNRNHIGQEVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQEALTAAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    +N N+ TG++E+ A+++ I + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPDNQVNKNMATGEVEVLAKELRIYNASD--ALPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G+++     +     F ++ + +A+ R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAPEVREIMERMVHGLWQNIIGVD--LGKFPQMTWQEAMTRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVEFKVFNEPANNPNGRVAVIRVPNGTEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R+ +Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPIAKFLNEEVWKALAERVKVQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFSPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGINEQEQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + + +  
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALAELSIAVTKAE 588


>gi|160900885|ref|YP_001566467.1| aspartyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|238687172|sp|A9BP37|SYD_DELAS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|160366469|gb|ABX38082.1| aspartyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 600

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 332/595 (55%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD    F+ A+
Sbjct: 4   RSHYCGLVTEALMGETVTLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRAEMFKTAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + GLV +R   T N  + +GQIE+   ++ +L+ +   P  +  E    E+
Sbjct: 64  GLRNEFCVQVKGLVRARPEGTTNDKLKSGQIEVLCHELNVLNASVTPPFQLDDENLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R LDLRR  + +N++ R R    +R  +  E FI+  TP+L  S+PEGARD+LVP
Sbjct: 123 VRLTNRVLDLRRPYMQRNMMLRYRTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM +G+DRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGEFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++++I    + ++  VF+   + +     F  + Y DA  R+G+DKPDLR  +    +T
Sbjct: 242 LDEEEIRAIFQRMITEVFKTQLDVDLGE--FPMMTYQDAAFRFGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E     +F+VFS   +   G  V      G   +R   D+  E+ +  G  GLA+I    
Sbjct: 300 EIMKDVDFKVFSTPATTKGGRVVALRVPGGSQISRGEIDQYTEFVKIYGAKGLAWIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+      I  R   QDGD  FF A             R  +   
Sbjct: 360 VAKGRDGLQSPIVKNLHDAAIAEILKRTGAQDGDLIFFGADKEKIVNDSIGALRLKVGHS 419

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N    N +   W++DFP +E +EE  +    H+PFT P+ G E L   D  +  A
Sbjct: 420 EFGKANGLFENRWAPLWVVDFPMFEHDEENDRWAAVHHPFTSPKDGHEELMVTDPANCLA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H ++V  + F  + IS E    +FG L  A Q G PPHGG+
Sbjct: 480 KAYDMVLNGWELGGGSVRIHRADVQSKVFDALKISPEDARAKFGYLLDALQYGAPPHGGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR++ L+ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+   
Sbjct: 540 AFGLDRLITLMTGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLRNP 594


>gi|148825398|ref|YP_001290151.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|166225348|sp|A5UAG7|SYD_HAEIE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148715558|gb|ABQ97768.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 588

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 215/592 (36%), Positives = 334/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ + + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRVYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++ +    +     F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAPEVREIMERMVHGLWLDTIGVD--LGKFPVMTWQEAMRRFGSDKPDLRNPLEIVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVEFKVFNEPANNPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R++ Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWKPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFSPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL +++ ++ 
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAIQVTKSE 588


>gi|319940836|ref|ZP_08015175.1| aspartyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319805718|gb|EFW02499.1| aspartyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 601

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 235/599 (39%), Positives = 337/599 (56%), Gaps = 10/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT   G +  S +G  V L GW HR R HGG+IF+D+RD  G+ QVV +PD    F  A 
Sbjct: 2   RTVYSGLVDESFIGQTVTLYGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEVFSTAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             R+E+ L + G+V +R   T N ++I+G +E+   ++EIL+ +   P     +    E+
Sbjct: 62  HCRNEYCLKVVGVVRARPEGTKNPSLISGGVEVLCHELEILNPSATPPF-HLDDENLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  YR LDLRR  + KN+  R R   + R  + A  FI+  TP LT S+PEGARD+LVP
Sbjct: 121 TRLTYRVLDLRRPVMQKNLRTRYRTAMAFRKFLDANGFIDVETPALTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV +G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVQEGCFFALPQSPQLFKQLLMVAGFDRYYQIVKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D+I   ME ++R VF+E  + + V N F  + +DDA+ +YG+DKPDLR  + +H VT
Sbjct: 240 LNMDEIRGLMEELIRTVFKEVLDVDFV-NPFPVMLWDDAMAKYGSDKPDLRISLRLHEVT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   +S F+VFS + S++ G  V           R+  D   E+ +  G  GLAYI    
Sbjct: 299 DIVENSAFKVFSGVKSLHNGKVVAMCVPGAAQLPRSEIDSYTEFVKIYGAKGLAYIKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+      I  R+  +DGD  FF A             R  I   
Sbjct: 359 LARGREGLQSPIVKNLSDEELNGILTRVGAKDGDIVFFGADKAKVVWDSLGALRLKIGHS 418

Query: 423 ----ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
               + G+     ++  W+++FP +E++EE+++    H+PFT P  G E     D     
Sbjct: 419 DFGVKTGLFTPG-WKPLWVINFPMFEYSEEDQRWVACHHPFTCPLDGDEDKLLTDPEHCY 477

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD V NG+EI  G IR H  +V  + F+ + I  E    +FG L  A + G PPHGG
Sbjct: 478 AKAYDCVLNGWEIGGGSIRIHREDVQEKVFAALKIGPEEARQKFGFLLDALKFGAPPHGG 537

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DRIV +++ A ++R+V  FP +Q    LL  +PS V  +QLREL +++    KK
Sbjct: 538 LAFGLDRIVAMMVDAPSIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIKLRREVKK 596


>gi|145634684|ref|ZP_01790393.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145268229|gb|EDK08224.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 588

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 218/592 (36%), Positives = 334/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+ + I G V++R    IN N+ TG++E+ A+++ + + ++   LP+   +   E 
Sbjct: 63  SLRNEFCIQIKGEVIARPDNQINKNMATGEVEVLAKELRVYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLQTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++ +    +     F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHGLWLDTIGVD--LGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVEFKVFNEPANNPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R++ Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFSPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+  
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVKAE 588


>gi|148827469|ref|YP_001292222.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166225349|sp|A5UGD3|SYD_HAEIG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148718711|gb|ABQ99838.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 588

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 218/592 (36%), Positives = 332/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVYFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++   LP+   +   E 
Sbjct: 63  SLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++ +    +     F  + + +A+ R+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHGLWLDTIGVD--LGKFPVMTWQEAMCRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVEFKVFNEPANNPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+AK LN    +A+  R++ Q GD  FF A             R  + ++
Sbjct: 358 INVGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFSPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+  
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVKAE 588


>gi|262402476|ref|ZP_06079037.1| aspartyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262351258|gb|EEZ00391.1| aspartyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 591

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVD--LGDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLLKDVDFKVFSGPANDPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L     +AI  R  +Q GD   F A             R    +E
Sbjct: 357 LAAGMEGIQSPVAKFLTEEIIQAIIERTQVQTGDIILFGADSAKVVAEALGALRLKAGKE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LGI N + +   W++DFP +E + +E  +   H+PFT P          +     +  YD
Sbjct: 417 LGITNESAWAPLWVVDFPMFEGD-DEGNVAAMHHPFTSPLNLTPEQLKANPEEALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +    K
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAVKLATK 588


>gi|258621668|ref|ZP_05716699.1| aspartyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258585899|gb|EEW10617.1| aspartyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 591

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 331/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD +  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N ++ TG++EL A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKDMATGEVELLARGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVD--LGDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLLKDVDFKVFSGPANDPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G V    PVAK L     +AI  R   Q GD   F A             R    +E
Sbjct: 357 LAAGMVGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LGI N + +   W++DFP +E + +E  +   H+PFT P          +     +  YD
Sbjct: 417 LGITNESAWAPLWVVDFPMFEGD-DEGNVAAMHHPFTSPLNLTPEQLKANPEEALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRIKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +    K
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAVKLATK 588


>gi|294141125|ref|YP_003557103.1| aspartyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293327594|dbj|BAJ02325.1| aspartyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 595

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 216/594 (36%), Positives = 335/594 (56%), Gaps = 6/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CGD+  S VG  V L GWV+R R  GG++FLD+RD  GI QVV +PD    F++A 
Sbjct: 2   RSQYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVAC 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE+ + I GLV +R    +N  + TG+IE+    + +L+ +  LP+ +   +   E 
Sbjct: 62  SLRSEFCVQIKGLVRARPDSQVNNQMRTGEIEILGTSLTVLNSSAPLPINMDKNQHNTEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + I+ R ++ +++R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAERIIFRAKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +++  E ++R +F+E  N +     F ++ + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MSSAQVMDKTEEMMRSLFKELLNVDLGE--FPKMTFAEAMRRFGSDKPDLRNPLELIDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF    +   G         G   +R   D   ++A   G  GLA++    
Sbjct: 299 DLLTDVEFKVFQGPATDPEGRVAVLCIPGGAKLSRKQLDEYAKYATIYGAKGLAWMKIND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G      PV K L+    + +  R D + GD   F A             R    ++
Sbjct: 359 LDKGLEGIQSPVLKFLSEDVVKGLLERTDAKSGDLILFGADKANIVSEAMGALRIKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++  + ++  W++DFP +E   +   +   H+PFT P G        D +S  +  YD
Sbjct: 419 FDLLKGD-WKPLWVVDFPMFERTSD-GGLHAMHHPFTAPSGMTPEQLEADPISAISDAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H SE+    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVLNGCELGGGSVRIHNSEMQTAVFRILGIEEEEANEKFGFLLEALRYGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DRI+ML+ G  ++R+V  FP +      L  +P   + EQL ELG+ ++++ ++
Sbjct: 537 DRIIMLMTGTSSIRDVMAFPKTTTAACPLTNAPGFANPEQLVELGIDVIKSEEE 590


>gi|258626387|ref|ZP_05721234.1| aspartyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258581439|gb|EEW06341.1| aspartyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 591

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD +  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N ++ TG++EL A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKDMATGEVELLARGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVD--LGDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLLKDVDFKVFSGPANDPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L     +AI  R   Q GD   F A             R    +E
Sbjct: 357 LAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LGI N + +   W++DFP +E + +E  +   H+PFT P          +     +  YD
Sbjct: 417 LGITNESAWAPLWVVDFPMFEGD-DEGNVAAMHHPFTSPLNLTPEQLKANPEEALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRIKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +    K
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAVKLATK 588


>gi|229525778|ref|ZP_04415183.1| aspartyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229339359|gb|EEO04376.1| aspartyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 591

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 329/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARNLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVD--LGDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLLKDVDFKVFSGPANDPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L     +AI  R   Q GD   F A             R    +E
Sbjct: 357 LAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LGI N + +   W++DFP +E + +E  +   H+PFT P          +     +  YD
Sbjct: 417 LGITNESAWAPLWVVDFPMFEGD-DEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +    K
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANQAALDELAIAVKLATK 588


>gi|120598881|ref|YP_963455.1| aspartyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|166225431|sp|A1RJQ6|SYD_SHESW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|120558974|gb|ABM24901.1| aspartyl-tRNA synthetase [Shewanella sp. W3-18-1]
          Length = 592

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 216/594 (36%), Positives = 331/594 (55%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFAVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G+V +R    +N  + TG+IE+  + + I++ A+ LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGVVRARPDSQVNGQMKTGEIEVLGKALTIINAADPLPLSLDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +++R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + ++ 
Sbjct: 241 MTSEQVMAKTEEMMRGLFLEMLNVDLGE--FPRMTYNEAMRRFGSDKPDLRNPLELVDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DLLKEVEFAVFSAPANDEEGRVAALRIPGGAALSRKQIDDYTKFVGIYGAKGLAWMKIND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PV K LN      I  R   Q GD   F A             R    ++
Sbjct: 359 LNLGLEGIQSPVLKFLNESIVNEIVSRTGAQTGDIILFGADQATVVAESMGALRLKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    +   W++DFP +E           H+PFT P+G   +    +  +  +  YD
Sbjct: 419 FSLLQ-GEWRPLWVVDFPMFEKI--NGNFHAVHHPFTAPRGVTAAELEANPANRVSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  E+    F  +GI+ +  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGCELGGGSVRIHNQEMQSAVFRILGITDDEAKEKFGFLLEALRYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +VE   K
Sbjct: 536 DRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVEKAVK 589


>gi|208779985|ref|ZP_03247328.1| aspartyl-tRNA synthetase [Francisella novicida FTG]
 gi|208743989|gb|EDZ90290.1| aspartyl-tRNA synthetase [Francisella novicida FTG]
          Length = 590

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 346/595 (58%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 2   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 62  LRSEFVIKAEGVVNLRPEGQENKNIASGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E       +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 241 DEAFIMSTMERMIAGLFKETIGVEF-ATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + +F+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 300 DMQNEDFKVFSGP-ANDPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 359 SLSQGKDGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E ++   ++   H+PFT P+   +E L   +   + +  
Sbjct: 419 DLDLFNKD-WAPLWVVDFPMFEKDD--NRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS E    +FG +  A   G P HGGIA 
Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ + +  +
Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAVKKEER 590


>gi|317502044|ref|ZP_07960226.1| aspartate-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331090440|ref|ZP_08339321.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316896518|gb|EFV18607.1| aspartate-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330401187|gb|EGG80780.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 597

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 232/597 (38%), Positives = 341/597 (57%), Gaps = 11/597 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFE 60
            RTH CG+L  ++ G  V + GWV + R  GG++F+D+RD  GI QVV      D+A  E
Sbjct: 9   KRTHRCGELSAANAGEKVTIMGWVQKNRNKGGLVFVDVRDRSGIIQVVCEEGKTDAALIE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ I G V  RS   +N  I TG+IE+   ++ ILS A   P P+    + 
Sbjct: 69  KAAGLRSEYVVAIVGEVAMRSG-AVNDKIATGEIEVIPSELRILSEALTPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  L +N++ +++++   R     E F+E  TP+L  S+PEGARD+
Sbjct: 128 KEEVRLKYRYLDLRRADLQRNLMMKSQVMTLTRQFFSEEGFLEVETPVLGKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFY LPQ+PQ YKQLLM SGFDRY QIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGSFYGLPQSPQLYKQLLMCSGFDRYIQIARCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ D++++  E  L  VF+E    + V     R+ + +A+ R+G+DKPDLR  + + 
Sbjct: 247 LSFVDVDEVIDVNERYLARVFKEVLGVD-VPLPIQRMTWQEAMDRFGSDKPDLRFGMELT 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT+   +  F VF+  +             +GG   R   D++  + +  G  GLAYI 
Sbjct: 306 DVTDVVKNCGFSVFTGAVENGGSVRGINAKGQGG-MPRKKIDKLTAFVKDYGAKGLAYIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D     +     AK +     +A+   +  + GD   F A             R  +
Sbjct: 365 IQEDG----SIKSSFAKFMTEEEMDALIKAMGAEAGDLLLFAADKNKVVWDSLGALRVEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +++ N F F WI +FP  EW+EE+ +    H+PFTMP      L  +D   ++A 
Sbjct: 421 AKQLELLDKNEFRFVWITEFPLLEWSEEQNRYVAMHHPFTMPMEEDLPLIDSDPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R    ++  + F  +G +KE   ++FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIFQDDIQEKMFEVLGFTKEQAYSQFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML+    ++R+V  FP  ++   L+  +PS V V+QL ELGL      +K
Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASCLMTEAPSVVDVKQLNELGLETTAETEK 597


>gi|134302781|ref|YP_001122749.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|166225347|sp|A4J0C7|SYD_FRATW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|134050558|gb|ABO47629.1| Aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 590

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 346/595 (58%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 2   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 62  LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E       +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 241 DEAFIMSTMERMIAGLFKETIGVEF-ATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 300 DMQNEEFKVFSGP-ANDPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 359 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E ++   ++   H+PFT P+   +E L   +   + +  
Sbjct: 419 DLDLFNKD-WAPLWVVDFPMFEKDD--NRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS +    +FG +  A   G P HGGIA 
Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ + +  +
Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAVKKEER 590


>gi|115352827|ref|YP_774666.1| aspartyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122322244|sp|Q0BBZ1|SYD_BURCM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|115282815|gb|ABI88332.1| aspartyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 600

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 227/598 (37%), Positives = 333/598 (55%), Gaps = 10/598 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + I GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQIKGLVRNRPEGTVNAGLKSGKIEVLCHELNVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +    +  F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVELDAT-FPVMPYSEAMARFGSDKPDLRVQLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGGELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+L+  +  AI  R   +DGD  FF A             R  I   
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +  G++    ++  W++DFP +E+++E+ +   AH+PFT P+         D     
Sbjct: 421 EFGKANGLVQAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCL 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+ +  +
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|254375257|ref|ZP_04990737.1| aspartyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|151572975|gb|EDN38629.1| aspartyl-tRNA synthetase [Francisella novicida GA99-3548]
          Length = 592

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 346/595 (58%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 4   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 64  LRSEFVIKAEGVVNLRPEGQENKNIASGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 123

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 124 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 183

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 184 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 242

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E       +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 243 DEAFIMSTMERMIAGLFKETIGVEF-ATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 301

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + +F+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 302 DMQNEDFKVFSGP-ANDPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 361 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 420

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E ++   ++   H+PFT P+   +E L   +   + +  
Sbjct: 421 DLDLFNKD-WAPLWVVDFPMFEKDD--NRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS E    +FG +  A   G P HGGIA 
Sbjct: 478 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ + +  +
Sbjct: 538 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAVKKEER 592


>gi|146293033|ref|YP_001183457.1| aspartyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166225429|sp|A4Y6S5|SYD_SHEPC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145564723|gb|ABP75658.1| aspartyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 592

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 216/594 (36%), Positives = 331/594 (55%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFAVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G+V +R    +N  + TG+IE+  + + I++ A+ LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGVVRARPDSQVNGQMKTGEIEVLGKALTIINAADPLPLSLDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +++R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + ++ 
Sbjct: 241 MTSEQVMAKTEEMMRGLFLEMLNVDLGE--FPRMTYNEAMRRFGSDKPDLRNPLELVDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DLLKEVEFAVFSAPANDEEGRVAVLRIPGGAALSRKQIDDYTKFVGIYGAKGLAWMKIND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PV K LN      I  R   Q GD   F A             R    ++
Sbjct: 359 LSLGLEGIQSPVLKFLNESIVNEIISRTGAQTGDIILFGADQATVVAESMGALRLKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    +   W++DFP +E           H+PFT P+G   +    +  +  +  YD
Sbjct: 419 FSLLQ-GEWRPLWVVDFPMFEKI--NGNFHAVHHPFTAPRGVTAAELEANPANRVSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  E+    F  +GI+ +  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGCELGGGSVRIHNQEMQSAVFRILGITDDEAKEKFGFLLEALRYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +VE   K
Sbjct: 536 DRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVEKAVK 589


>gi|90411660|ref|ZP_01219670.1| aspartyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90327550|gb|EAS43903.1| aspartyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 597

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 218/597 (36%), Positives = 334/597 (55%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD    FE+A 
Sbjct: 2   RTQYCGHLNKSFEGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDVFELAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V  R    +N  + TG++E+ A  +EI++ ++   LP+   +   E 
Sbjct: 62  QLRNEFCIRLIGEVRVRPESQVNKKMATGEVEILATGLEIINRSD--VLPLDFNQNNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKFRYLDLRRPEMSDRIKLRAKASSFVRRFLDENAFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++  +++E  N +     F  + +++A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSAEQVRGMTEKMITEMWKELLNVD--LGTFPIMPFEEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DILKDVDFKVFSGPANDEKGRVAVIRVPGGASLSRKQIDEYTKFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E+G      PVAK LN      +  R   Q GD   F A             R  + ++
Sbjct: 357 REAGFAGVQSPVAKFLNEEVVATLLDRTQAQTGDIILFGADSKRVVTEAMGALRLKLGED 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + ++  W++DFP +E + +E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LELTDKSAWKPLWVIDFPMFEED-DEGNLHAMHHPFTSPLGITAEELAVNPAAANSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    FS +GI +   +++FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNAEMQSAVFSILGIEEGEQQSKFGFLLEALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+VMLL G  N+R+V  FP +     LL  +PS  + E L+EL + +    K+  K
Sbjct: 536 DRLVMLLCGTDNIRDVIAFPKTTAASCLLTNAPSLANPESLKELSIAVAIAKKETDK 592


>gi|229549691|ref|ZP_04438416.1| aspartyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255972389|ref|ZP_05422975.1| aspartyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|257422241|ref|ZP_05599231.1| aspartyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|312951290|ref|ZP_07770191.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|229305171|gb|EEN71167.1| aspartyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255963407|gb|EET95883.1| aspartyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|257164065|gb|EEU94025.1| aspartyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|310630726|gb|EFQ14009.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|315152596|gb|EFT96612.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315159884|gb|EFU03901.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0312]
          Length = 589

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 227/591 (38%), Positives = 333/591 (56%), Gaps = 10/591 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
            RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+     +EI
Sbjct: 3   KRTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A   RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    
Sbjct: 63  ADKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVN 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+L
Sbjct: 123 DELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F+  ++I    EN+L  V +E       S  F R+ YD+A+ RYG+DKPD R  + + +
Sbjct: 242 TFLTPEEIQTYTENMLAEVMKETKGIEI-SVPFPRMSYDEAMARYGSDKPDTRFAMELID 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V E     +F+VF   L      +           +R   D + ++    G  GLA++  
Sbjct: 301 VAEVVKDVDFKVFQAALENGGHVKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWLKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK L    ++ +    + + GD   F A  P    +     R  + 
Sbjct: 361 EED-----GLKGPIAKFLT-EVSDELIAATNAEVGDILMFGADKPEIVAAALGAVRTRLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+    +    D  S+ A  
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAEA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA 
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIAL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 535 GLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|194324051|ref|ZP_03057826.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|194321948|gb|EDX19431.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
          Length = 590

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 227/595 (38%), Positives = 346/595 (58%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 2   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 62  LRSEFVIKAEGVVNLRPEGQENKNIASGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E       +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 241 DEAFIMSTMERMIAGLFKETIGVEF-ATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 300 DMQNEEFKVFSGP-ANDPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 359 SLSQGKDGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E ++   ++   H+PFT P+   +E L   +   + +  
Sbjct: 419 DLDLFNKD-WAPLWVVDFPMFEKDD--NRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS E    +FG +  A   G P HGGIA 
Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ + +  +
Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAVKKEER 590


>gi|301169026|emb|CBW28623.1| aspartyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 588

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 217/592 (36%), Positives = 333/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ + + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRVYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++ +    +     F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHGLWLDTIGVD--LGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVEFKVFNEPANNPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R++ Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFSPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+  
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVKAE 588


>gi|29376492|ref|NP_815646.1| aspartyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227519312|ref|ZP_03949361.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|257419651|ref|ZP_05596645.1| aspartyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|46577229|sp|Q833I2|SYD_ENTFA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|29343956|gb|AAO81716.1| aspartyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227073241|gb|EEI11204.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|257161479|gb|EEU91439.1| aspartyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|315574559|gb|EFU86750.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315581799|gb|EFU93990.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 589

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 228/594 (38%), Positives = 334/594 (56%), Gaps = 11/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--AC 58
           M + RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +EIA   RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  + 
Sbjct: 60  WEIADKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDN 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGAR
Sbjct: 120 NVNDELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E +F+  ++I    EN+L  V +E       S  F R+ YD+A+ RYG+DKPD R  + 
Sbjct: 239 IETTFLTPEEIQTYTENMLAEVMKETKGIEI-SVPFPRMSYDEAMARYGSDKPDTRFAME 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V E     +F+VF   L      +           +R   D + ++    G  GLA+
Sbjct: 298 LIDVAEVVKDVDFKVFQAALENGGHVKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +    D        GP+AK L    ++ +    + + GD   F A  P    +     R 
Sbjct: 358 LKVEED-----GLKGPIAKFLT-EVSDELIAATNAEVGDILMFGADKPEIVAAALGAVRT 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+         D  S+ 
Sbjct: 412 RLGKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVDRLATDPASVY 471

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGG
Sbjct: 472 AEAYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IA G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 532 IALGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|257867152|ref|ZP_05646805.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257873487|ref|ZP_05653140.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257801208|gb|EEV30138.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257807651|gb|EEV36473.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 591

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 231/595 (38%), Positives = 337/595 (56%), Gaps = 10/595 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG +  + +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+     +EI
Sbjct: 3   KRTVYCGLVNETHLNQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEVSKEAWEI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A   RSE+VL + G V++R+ E IN  ++TG  E+   +I IL+ A+     +  ++   
Sbjct: 63  ADKCRSEYVLEVTGQVINRAPEAINPKMVTGAYEVMISEITILNTAKTPAFLIEDDQTVG 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  +  NIV R +   ++R  +   +F++  TP L  S+PEGARD+L
Sbjct: 123 DEIRMKYRYLDLRRPKMTNNIVMRAKTTQAIRNFLDTNDFLDIETPYLGKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRIYPGHFYALPQSPQIFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+  ++I    E +L  V  E      V+  F R+ YD+A+ RYG+DKPD R  + + +
Sbjct: 242 SFLTAEEIQTYTEELLAKVMREVKGIE-VTLPFPRMTYDEAMGRYGSDKPDTRFDMELID 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E     +F+VF   L      +V          +R   D +  +A   G  GLA++  
Sbjct: 301 LSEVVKDVDFKVFQMALEKGGVVKVLNAKGAADKYSRKDMDNLGHYAGQFGAKGLAWVKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK L    T+AI    + + GD   F A       +     RN + 
Sbjct: 361 EED-----GLKGPIAKFLT-EATDAIIAAANAEVGDILMFGADSFAIVSATLGAIRNKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +ELG+I+ + F F W+ D+P +E++EE  +   AH+PFT+P+     +   D   + A  
Sbjct: 415 KELGLIDESKFNFLWVTDWPQFEYDEEAGRYVSAHHPFTLPKESDLPMLTTDPSKVYAQA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  EV  Q F  +G S+  ++N+FG L  A   G PPHGGIA 
Sbjct: 475 YDIVLNGYELGGGSLRIHTREVQEQMFEALGFSRREMQNQFGFLLDALDYGFPPHGGIAL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VMLL G +N+REV  FP +    D +  +PSTVS  QL +L + +    +
Sbjct: 535 GLDRLVMLLAGEENIREVIAFPKNGKAADPMSQAPSTVSPMQLFDLNIDVTTVEE 589


>gi|261210674|ref|ZP_05924966.1| aspartyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260840159|gb|EEX66739.1| aspartyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 591

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD +  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N ++ TG++EL A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKDMATGEVELLARGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    NF  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVD--LGNFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLLKEVDFKVFSGPANDPKGRVAALRIPGGAALTRKQIDEYTTFVAIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L     +AI  R   Q GD   F A             R    +E
Sbjct: 357 LAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LGI N + +   W++DFP +E + +E  +   H+PFT P          +     +  YD
Sbjct: 417 LGITNESAWAPLWVVDFPMFEGD-DEGNVAAMHHPFTSPLNLTPEQLKANPEEALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +    K
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAVKLATK 588


>gi|145640262|ref|ZP_01795846.1| aspartyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145274848|gb|EDK14710.1| aspartyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 588

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 218/592 (36%), Positives = 334/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++ +    +     F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAPEVREIMERMVHGLWLDTIGVD--LGKFPVMTWQEAMRRFGSDKPDLRNPLEIVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G  V      G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVEFKVFNEPANNPNGRVVVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R++ Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWKPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFSPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+  
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVKAE 588


>gi|332288351|ref|YP_004419203.1| aspartyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330431247|gb|AEC16306.1| aspartyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 589

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 219/590 (37%), Positives = 332/590 (56%), Gaps = 7/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           R+H CG L  S +G  V LSGWVHR R  GG+IF+++RD  GI QV  +P +   FE A 
Sbjct: 3   RSHYCGALNRSHIGQEVTLSGWVHRRRDLGGLIFINMRDREGIVQVFIDPKNQQAFEKAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+ + I G V++R    IN N+ TG++E+SA  + I + +E   LP+   +   E 
Sbjct: 63  NLRSEYCIQIKGQVIARPENQINKNMATGEVEVSATDVLIYNASE--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSYVRRFMDSHGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++ E    +     F  + Y +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVRAIMEEMIHGLWLEILGVD--LGKFPIMTYAEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D   ++    G  GLA++    
Sbjct: 298 DLLKEVDFKVFSGPANDAKGRIAAIRVPNGSHITRKQIDEYTQFVTIYGAKGLAWMKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+     A+  RL  Q GD  FF A             R  + ++
Sbjct: 358 VNAGIDGVQSPIAKFLSAEVVAALLERLQAQSGDIIFFGADSYKVVTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G+   + +   W++DFP +E ++ E  +   H+PFT P            +   A  YD
Sbjct: 418 CGLTQLDQWAPLWVIDFPMFE-DDGEGGLAAMHHPFTSPAHVTPEELEKSPVDAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDQKMQQTVFRILGINEQEQYEKFGFLLDALKYGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           DR+ MLL G +N+R+V  FP +     L+  +PS  +   L+EL +++V+
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSVANPAALQELSIQVVK 586


>gi|303256235|ref|ZP_07342251.1| aspartate--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302860964|gb|EFL84039.1| aspartate--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 597

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 234/599 (39%), Positives = 343/599 (57%), Gaps = 10/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT   G +    +G  V L GW HR R HGG+IF+D+RD  G+ Q+V +PD    FE A 
Sbjct: 2   RTEYAGLIDEKFLGQTVTLYGWAHRRRDHGGVIFIDLRDREGLVQIVCDPDRPDVFETAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+V+ + GLV +R   T N N+I+G +E+ AQ+++IL+ +   P  +  E    E+
Sbjct: 62  KVRNEFVVEVKGLVRARPEGTRNENLISGGVEVLAQELKILNPSAPPPFLLDDENLS-ET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  YR LDLRR  + +N+  R +   + R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTYRVLDLRRLPMQRNMKLRYKAAMAFRRFLDKHGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR++ G FYALPQ+PQ +KQ+LM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRIHDGHFYALPQSPQLFKQMLMCAGFDRYYQIVKCFRDEDLRADRQP-EFTQVDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I   ME ++R VF+E  N + + N F  + + DA+  YG+DKPDLR  + + ++T
Sbjct: 240 LNEVEIRALMEELIRAVFKEAINVD-LPNPFPIMLWTDAMNNYGSDKPDLRVKLKLTDLT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + +F+VF     +N G  +      G    R+  D   E+ +  G  GLAYI    
Sbjct: 299 DLMSNVDFKVFRSATELNDGRVMALRVPHGASMPRSEIDGYTEFVKIYGAKGLAYIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
            ++G      P+ K+L+    +AI  R   QDGD  FF A             R  +   
Sbjct: 359 IKAGREGLQSPIVKNLSDDVLKAIIERTGAQDGDVIFFGADRKKIVFDSLGALRLKVGHS 418

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +  G+     +   W++DFP +E++EEE++    H+PFT P+ G E     D  +  
Sbjct: 419 EFGKSHGLF-EEGWRPLWVIDFPMFEYDEEEERWVACHHPFTSPKDGDEDKLVTDPENCF 477

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G IR H ++V  + F+ + I  E    +FG L    Q G PPHGG
Sbjct: 478 AKAYDMVLNGWEIGGGSIRIHKADVQSKVFNALKIGPEEARAKFGFLLDVLQYGAPPHGG 537

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V  +QLREL +R+    KK
Sbjct: 538 LAFGLDRIVTMMCGADSIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRLRNEHKK 596


>gi|325521380|gb|EGD00220.1| aspartyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 600

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 227/597 (38%), Positives = 330/597 (55%), Gaps = 8/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQVKGLVRNRPDGTVNAGLKSGKIEVLCHELNVLNASITPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +       F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVALDEK-FPVMPYSEAMARFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KG   +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGAELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   +DGD  FF A             R  I   
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E+++E+ +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVEAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQAKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+ +  +
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|297616961|ref|YP_003702120.1| aspartyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144798|gb|ADI01555.1| aspartyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 592

 Score =  625 bits (1611), Expect = e-177,   Method: Composition-based stats.
 Identities = 240/595 (40%), Positives = 344/595 (57%), Gaps = 10/595 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTHS  ++    VG  V L+GW+   R HGG+IF+D+RD  GI Q+V +PD     F +
Sbjct: 3   KRTHSAREIAPLLVGQRVVLNGWIDTRRDHGGLIFVDLRDRSGIVQLVFSPDVDEKAFRL 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE V+  +G+V  R   T N N+ TG +E+   K EI S A+  P  +    E  
Sbjct: 63  AEEMRSEHVIGAEGVVRMRPEGTENLNLETGTVEVYVDKAEIFSRAKTPPFYIEDGIEVD 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +YR+LDLRR  +  N+V R R+I +MR  +    F+E  TPILT S+PEGARD+L
Sbjct: 123 EHLRLRYRYLDLRRPEMKNNLVFRHRVIKAMRDFLDKRGFLEIETPILTKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G F+ALPQ+PQ +KQ+LM +G ++YFQ+A CFRDED R+DR P EF QLD+E 
Sbjct: 183 VPSRVHPGEFFALPQSPQLFKQILMVAGMEKYFQVARCFRDEDLRADRQP-EFTQLDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE++DI   +E++L  V EE      V   FLR+ Y +A+ RYGTDKPDLR  + + +
Sbjct: 242 SFVEEEDIFELVESMLSEVIEEVMGR-RVDTPFLRLTYQEAMTRYGTDKPDLRFGLEITD 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VTE     +F+VFS  ++             G   +R   D +   A   G  GLA+I  
Sbjct: 301 VTEIVRGVDFKVFSTAIASGGVVRALNAKTCG-SFSRKEIDDLTALALKLGAKGLAWINV 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D         P+ K ++    E +   L  + GD   F A      C    + R  + 
Sbjct: 360 TTD-----GLKSPITKFISEEIMEKMLAALKAEPGDLILFGADQEEVVCRVLGNLRLELG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +       F WI DFP  E+++EEK+    H+PFT P+         + L +++  
Sbjct: 415 KKLKLAREEDLSFVWITDFPLLEYDDEEKRYVAVHHPFTAPRIEDIPRLEQEPLRVRSRA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR H  E+  + FS +G+S++  + +FG L  AF+ G PPHGGIA 
Sbjct: 475 YDLVLNGTEVGGGSIRIHQRELQERMFSLLGMSQDEAKQKFGFLLEAFEYGTPPHGGIAF 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR++MLL G +++R+V  FP +Q+    + G+PS VS  QL+ELG+R+    K
Sbjct: 535 GVDRLLMLLSGRESIRDVIAFPKTQSAVCPMTGAPSEVSERQLKELGIRVRSKQK 589


>gi|315157281|gb|EFU01298.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0043]
          Length = 589

 Score =  625 bits (1611), Expect = e-176,   Method: Composition-based stats.
 Identities = 226/591 (38%), Positives = 332/591 (56%), Gaps = 10/591 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
            RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+     +EI
Sbjct: 3   KRTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A   RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    
Sbjct: 63  ADKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVN 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+L
Sbjct: 123 DELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F+  ++I    EN+L  V +E          F R+ YD+A+ RYG+DKPD R  + + +
Sbjct: 242 TFLTPEEIQTYTENMLAEVMKETKGIEI-PVPFPRMSYDEAMARYGSDKPDTRFAMELID 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V E     +F+VF   L      +           +R   D + ++    G  GLA++  
Sbjct: 301 VAEVVKDVDFKVFQAALENGGHVKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWLKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK L    ++ +    + + GD   F A  P    +     R  + 
Sbjct: 361 EED-----GLKGPIAKFLT-EVSDELIAATNAEVGDILMFGADKPEIVAAALGAVRTRLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+    +    D  S+ A  
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAEA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA 
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIAL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 535 GLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|262394697|ref|YP_003286551.1| aspartyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338291|gb|ACY52086.1| aspartyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 592

 Score =  625 bits (1611), Expect = e-176,   Method: Composition-based stats.
 Identities = 221/597 (37%), Positives = 334/597 (55%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R     N ++ TG++E+ A  +EI++ ++   LP+   ++  E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPESQANKDMATGEVEILATGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    EN++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVREVTENMVRDMWQELLNVD--LGQFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   E+    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVIRVPGGASLTRKQIDGYGEFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN      I  R   + GD   F A             R  + ++
Sbjct: 357 RAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKAGIVAEAMGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E + +E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LELTDESAWAPLWVVDFPMFEED-DEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +++    F  +GI+ E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNADMQEAVFDILGITPEEQQLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K  +
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSIANPAALEELAIAVTAAKEKDAE 592


>gi|224367378|ref|YP_002601541.1| AspS [Desulfobacterium autotrophicum HRM2]
 gi|259511856|sp|C0QFI1|SYD_DESAH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|223690094|gb|ACN13377.1| AspS [Desulfobacterium autotrophicum HRM2]
          Length = 596

 Score =  624 bits (1610), Expect = e-176,   Method: Composition-based stats.
 Identities = 242/591 (40%), Positives = 357/591 (60%), Gaps = 11/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG+L V+DV + V L GWV R R HGG+IF+D RD  GITQ+V NP+        A
Sbjct: 10  RTHTCGELRVTDVDTEVTLMGWVQRRRDHGGVIFIDFRDKEGITQIVFNPEVNPEVHAKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++RSE+VL + G V++R  + +N  ++TG IE+   +++ILS AE     +    E  E
Sbjct: 70  QTIRSEYVLGVKGRVVNRPDDMVNPKMVTGGIEILVDELKILSRAETPAFQIEDRIEASE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR LDLRR  L +NI+ R     ++R  +    F++  TP LT S+PEGARD+LV
Sbjct: 130 TVRLKYRHLDLRRPKLQQNIIARHTASRAVRDYLNDLGFLDIETPFLTRSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+DMEMS
Sbjct: 190 PSRVNHGQFYALPQSPQLFKQMLMISGFDRYYQIVRCFRDEDLRADRQP-EFTQIDMEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV +D+I+   E +++ VF+   + + +   F RI Y ++I R+G D+PD+R  + ++++
Sbjct: 249 FVGEDEIMEITEGLIKTVFKRVRDID-LELPFQRITYAESIDRFGIDRPDMRFGLELNDL 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++   ++ F+VF+ ++      +  AI AKG     R   D + ++A      GLA++  
Sbjct: 308 SDLVENTGFKVFASVVKKGGLVK--AINAKGCANFTRKQIDELTDFAAIYKAKGLAWVKV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D         P+AK       +AI VRLDM+  D  FF+A +P          RN +A
Sbjct: 366 KADG----TWQSPIAKFFTDDEKKAIEVRLDMEKDDIVFFVADNPKITNEALGQLRNELA 421

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L +I+ N + F W+  FP  E++E EK+    H+PFT P          D L++++  
Sbjct: 422 RRLELIDNNTYRFVWVTHFPLVEYDEGEKRYQAIHHPFTAPLEEDLEKLDTDPLNVRSRA 481

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H +E+  +  + +GI KE   ++FG L  A   G PPHGG+A 
Sbjct: 482 YDMVLNGIEIGGGSIRIHSTELQEKVLNTLGIGKEEANDKFGFLLNALGSGTPPHGGLAF 541

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G DR+VMLL   +++R+V  FP +Q    LL  +PS  +  QL+EL +R+V
Sbjct: 542 GFDRLVMLLCQEESIRDVIAFPKTQRATCLLTEAPSKAAPAQLQELSIRVV 592


>gi|224458012|ref|ZP_03666485.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|62287523|sp|Q5NIQ4|SYD_FRATT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|282158294|gb|ADA77685.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 590

 Score =  624 bits (1610), Expect = e-176,   Method: Composition-based stats.
 Identities = 227/595 (38%), Positives = 346/595 (58%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 2   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 62  LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E       +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 241 DEAFIMSTMERMIAGLFKETIGVEF-ATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 300 DMQNEEFKVFSGP-ANDPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 359 SLSQGKEGLQSPIVKNISEETLFKVIDKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E ++   ++   H+PFT P+   +E L   +   + +  
Sbjct: 419 DLDLFNKD-WAPLWVVDFPMFEKDD--NRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS +    +FG +  A   G P HGGIA 
Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GIDR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ + +  +
Sbjct: 536 GIDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAVKKEER 590


>gi|319761676|ref|YP_004125613.1| aspartyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|317116237|gb|ADU98725.1| aspartyl-tRNA synthetase [Alicycliphilus denitrificans BC]
          Length = 599

 Score =  624 bits (1610), Expect = e-176,   Method: Composition-based stats.
 Identities = 219/595 (36%), Positives = 337/595 (56%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD    F++A+
Sbjct: 4   RSHYCGLVTEALMGQTVSLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRPEMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R A T N  + +GQIE+   ++++L+ +   P  +  +    E+
Sbjct: 64  DIRNEFCVRVQGVVRARPAGTTNDKLKSGQIEVLCHELDVLNPSVTPPFQMDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R +DLRR  + +N++ R +    +R  +  E F++  TP+L  S+PEGARD+LVP
Sbjct: 123 TRLTHRVMDLRRPAMQRNLMLRYKTAIQVRNFLDKEGFVDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM +G+DRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    + ++  VF++  + +     F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LNEEEIRAIFQRMIVEVFKQQLDVDLGE--FPTMAYAEAMHRFGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G  V      G   +R   D+  E+ +  G  GLA+I    
Sbjct: 300 DVMRDVDFKVFSTPATTKGGRVVALRVPGGAAISRGEIDQYTEFVKIYGAKGLAWIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+++      I  R   QDGD  FF A             R  +   
Sbjct: 360 AAKGRDGLQSPIVKNIHDAAIAEILKRTGAQDGDLVFFGADKEKIVNDSIGALRLKVGHS 419

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N    N +   W++DFP +E +E+E +    H+PFT P+ G E L   D     A
Sbjct: 420 EFGRQNGLFENRWAPLWVVDFPMFEHDEDEDRWVAVHHPFTSPKDGHEDLMDTDPGKCIA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H ++V  + FS + I  E    +FG L  A Q G PPHGG+
Sbjct: 480 KAYDMVLNGWELGGGSVRIHRADVQSKVFSALKIGPEDARAKFGYLLDALQYGAPPHGGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR++ L+ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+   
Sbjct: 540 AFGLDRLITLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLRNP 594


>gi|262380200|ref|ZP_06073355.1| aspartyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|262298394|gb|EEY86308.1| aspartyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 594

 Score =  624 bits (1610), Expect = e-176,   Method: Composition-based stats.
 Identities = 241/594 (40%), Positives = 343/594 (57%), Gaps = 9/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYPE 122
             RSE+VL I G V  R A T NAN+I+GQIE+  ++IE+L+ +E  P P+  E     E
Sbjct: 63  KARSEYVLKITGRVRRRYAGTENANMISGQIEVLGKEIEVLAQSETPPFPLNDENTNISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLD+RR  +   +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDENGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E          F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FMSDDDIMDLMEGMTVKMFDELLGIKFDK--FQRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+       G  V       G   R+  D   ++    G  GLAYI   
Sbjct: 300 ADLMQDVEFKVFAGPAKDPKGRIVALRVPGAGSLPRSAIDEYTKFVGIYGAKGLAYIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G      P+ K +  +  + ++ R+  ++GD  FF A             R  I  
Sbjct: 360 ELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFFGADKAKVVNDAMGALRVKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +  C  +   W++DFP +E  ++  K    H+PFT+P+  +E +K N      +  Y
Sbjct: 419 DLNLATCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTLPKSSVEEVKNN-PGEALSVAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG EI  G +R +  E+    F  +GI++E  E +F  L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTEIGGGSLRIYTLEMQKAIFEALGINEEEAEEKFSFLLNALRYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PK
Sbjct: 536 LDRLVMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589


>gi|54288373|gb|AAV31661.1| predicted aspartyl-tRNA synthetase [uncultured alpha
           proteobacterium EBAC2C11]
          Length = 602

 Score =  624 bits (1610), Expect = e-176,   Method: Composition-based stats.
 Identities = 308/597 (51%), Positives = 398/597 (66%), Gaps = 9/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L  ++VG  VRLSGWV+R R HG ++F+D+RDHYG+TQ V +   A FE
Sbjct: 12  MHAYRSHNCVELTEANVGQQVRLSGWVNRKRDHGQLVFVDLRDHYGLTQCVVDSSDASFE 71

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + ++ R E V+ I G V+ RS +TIN  + TG IE+  +  E+ S A+ LPL V  + + 
Sbjct: 72  MVEATRLESVVTITGTVLKRSEDTINKALPTGHIEVRIETFEVQSNADTLPLQVNSDEDS 131

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR+LDLRR+  H NI+ R  II S+R RM+A++F E  TPILTASSPEGARDF
Sbjct: 132 GEDTRLRYRYLDLRRNRPHANIMLRAEIIQSIRARMVAQDFTEFQTPILTASSPEGARDF 191

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQAPQQ+KQL+M SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 192 LVPARLHPGKFYALPQAPQQFKQLIMVSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDLE 251

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ + +E V++GVFEEFS    V  NFL I Y D++ +YG DKPDLR P  + 
Sbjct: 252 MSFVEQQDVFDAVEPVIKGVFEEFSE-KVVDANFLHISYADSMLKYGNDKPDLRIPFEIC 310

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT+ F  S+F +F+K +           P  G   +RA  DRMN WA+ +G PG+ YI 
Sbjct: 311 DVTDIFRGSDFSIFAKNIEKGAVVRAVPGPKCG---SRAIADRMNSWAQGEGAPGMGYII 367

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +     G     GPVAK L     EAIRV   + DGD+ FF         S A  AR  I
Sbjct: 368 Y-----GEGEARGPVAKALGAEKAEAIRVAAGVGDGDAVFFACAPADDAASLAGRARVKI 422

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            Q+  +I+ N F F WI+DFP +E +    KIDF+HNPF+MPQGGM++L+  + L+IKA+
Sbjct: 423 GQDHDLIDKNLFRFAWIVDFPMFEADPSTGKIDFSHNPFSMPQGGMKALEEQNPLNIKAW 482

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG E++SG IRNH+ EVM +AF   G  K +V  +F  +  AF+ G PPHGGIA
Sbjct: 483 QYDLVCNGVELSSGAIRNHLPEVMYKAFEIAGYPKSIVNEKFPAMINAFRFGAPPHGGIA 542

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRIVML+    N+REV LFPM+    DL+M +PS V    L EL +R     KK
Sbjct: 543 PGIDRIVMLIADEPNIREVILFPMNGKAEDLMMAAPSEVDEAALAELHIRRAPQAKK 599


>gi|170699192|ref|ZP_02890245.1| aspartyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170734087|ref|YP_001766034.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|171317330|ref|ZP_02906526.1| aspartyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|172061684|ref|YP_001809336.1| aspartyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|254247242|ref|ZP_04940563.1| Aspartyl-tRNA synthetase [Burkholderia cenocepacia PC184]
 gi|238688609|sp|B1JYI9|SYD_BURCC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238692860|sp|B1YWF2|SYD_BURA4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|124872018|gb|EAY63734.1| Aspartyl-tRNA synthetase [Burkholderia cenocepacia PC184]
 gi|169817329|gb|ACA91912.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|170135917|gb|EDT04192.1| aspartyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|171097529|gb|EDT42367.1| aspartyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171994201|gb|ACB65120.1| aspartyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 600

 Score =  624 bits (1610), Expect = e-176,   Method: Composition-based stats.
 Identities = 227/598 (37%), Positives = 333/598 (55%), Gaps = 10/598 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + I GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQIKGLVRNRPEGTVNAGLKSGKIEVLCHELNVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVQLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGGELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+L+  +  AI  R   +DGD  FF A             R  I   
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +  G++    ++  W++DFP +E+++E+ +   AH+PFT P+         D     
Sbjct: 421 EFGKANGLVQAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCL 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+ +  +
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|330823547|ref|YP_004386850.1| aspartyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|329308919|gb|AEB83334.1| aspartyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 599

 Score =  624 bits (1610), Expect = e-176,   Method: Composition-based stats.
 Identities = 219/595 (36%), Positives = 337/595 (56%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD    F++A+
Sbjct: 4   RSHYCGLVTEALMGQTVSLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRPEMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R A T N  + +GQIE+   ++++L+ +   P  +  +    E+
Sbjct: 64  DIRNEFCVRVQGVVRARPAGTTNDKLKSGQIEVLCHELDVLNPSVTPPFQMDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R +DLRR  + +N++ R +    +R  +  E F++  TP+L  S+PEGARD+LVP
Sbjct: 123 TRLTHRVMDLRRPAMQRNLMLRYKTAIQVRNFLDKEGFVDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM +G+DRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    + ++  VF++  + +     F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LNEEEIRAIFQRMIVEVFKQQLDVDLGE--FPTMAYAEAMHRFGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G  V      G   +R   D+  E+ +  G  GLA+I    
Sbjct: 300 DVMRDVDFKVFSTPATTKGGRVVALRVPGGAAISRGEIDQYTEFVKIYGAKGLAWIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+++      I  R   QDGD  FF A             R  +   
Sbjct: 360 AAKGRDGLQSPIVKNIHDAAIAEILKRTGAQDGDLVFFGADKEKIVNDSIGALRLKVGHS 419

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N    N +   W++DFP +E +E+E +    H+PFT P+ G E L   D     A
Sbjct: 420 EFGRQNGLFENRWAPLWVVDFPMFEHDEDEDRWVAVHHPFTSPKDGHEDLMDTDPGKCIA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H ++V  + FS + I  E    +FG L  A Q G PPHGG+
Sbjct: 480 KAYDMVLNGWELGGGSVRIHRADVQSKVFSALKIGPEDARAKFGYLLDALQYGAPPHGGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR++ L+ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+   
Sbjct: 540 AFGLDRLITLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLRNP 594


>gi|262165437|ref|ZP_06033174.1| aspartyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262025153|gb|EEY43821.1| aspartyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 591

 Score =  624 bits (1610), Expect = e-176,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 330/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD +  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N ++ TG++EL A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKDMATGEVELLARGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVD--LGDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLLKDVDFKVFSGPANDPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L     +AI  R   Q GD   F A             R    +E
Sbjct: 357 LAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LGI N + +   W++DFP +E + +E  +   H+PFT P          +     +  YD
Sbjct: 417 LGITNESAWAPLWVVDFPMFEGD-DEGNVAAMHHPFTSPLNLTPEQLKANPEEALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRIKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +    K
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALDELAIAVKLATK 588


>gi|90580113|ref|ZP_01235921.1| aspartyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438998|gb|EAS64181.1| aspartyl-tRNA synthetase [Vibrio angustum S14]
          Length = 596

 Score =  624 bits (1610), Expect = e-176,   Method: Composition-based stats.
 Identities = 214/593 (36%), Positives = 329/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD +  F +A 
Sbjct: 2   RTHYCGHLNKSLAGQTVDLCGWVNRRRDLGGLIFIDMRDREGVVQVVIDPDMTEIFTLAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V  R     N ++ TG++E+ A  +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRNEFCIRLTGEVRERPESQCNKDMATGEVEIYATGLEIINRSD--ALPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNAFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G+FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGNFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++    E ++  +++E  N +     F  + +++A RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEEVRAVTEKMITEMWKELLNVD--LGTFPIMSFEEADRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DIVKDVDFKVFSGPANDEKGRVAVIRVPGGAELSRKQIDEYTKFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN      +  R   + GD   F A             R  + ++
Sbjct: 357 RAAGFEGVQSPVAKFLNEEVVANLLERTQAESGDIILFGADSKRVVTEAMGALRLKLGED 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + ++  W++DFP +E NE+   +   H+PFT P          +  +  +  YD
Sbjct: 417 LGLTDKSAWKPLWVVDFPMFEENED-GSLSAMHHPFTSPLNLTPEELAANPAAALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H S++    F  +GIS +    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNSDMQSTVFDILGISADEQRLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G  N+R+V  FP +     LL  +PS  +   L EL + +    K
Sbjct: 536 DRLVMLLCGTDNIRDVIAFPKTTAAACLLTDAPSLANPAALEELSIAVKIAKK 588


>gi|238919498|ref|YP_002933013.1| aspartyl-tRNA synthetase, [Edwardsiella ictaluri 93-146]
 gi|259511858|sp|C5B9S7|SYD_EDWI9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238869067|gb|ACR68778.1| aspartyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 591

 Score =  624 bits (1610), Expect = e-176,   Method: Composition-based stats.
 Identities = 214/591 (36%), Positives = 322/591 (54%), Gaps = 7/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L +S VG  V L GWVHR R  GG+IF+D+RD  G+ QV  +PD    F  A 
Sbjct: 2   RTNYCGQLNLSHVGQEVTLCGWVHRRRDLGGLIFIDLRDREGVVQVFFDPDHQDAFRQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R     N+ + TG+IE+    + +++ AE   LP+   +   E 
Sbjct: 62  ELRNEFCVQVTGTVRARPESQRNSEMPTGEIEVFGHGLTLINRAEP--LPLDFNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I   +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 NRLKYRYLDLRRPEMAARLKTRAKITAFVRRFMDNHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME + R ++ E    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSAGQVREIMEALARALWMEIKGVD--LGDFPVMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G  +      G    R   D   ++    G  GLA++    
Sbjct: 297 DLVKSVDFKVFSGPANDARGRVIALRVPGGATLTRKNIDEYGQFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    E I  R   Q GD  FF A             R  + ++
Sbjct: 357 RAAGMDGVQSPIAKFLNAEVLEGILARSGAQSGDIIFFGADSAKVATDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E +  E  +   H+PFT P+         + +   A  YD
Sbjct: 417 LQLTDESRWAPLWVVDFPMFEED-GEGGLAAMHHPFTSPRDISPEALKANPVGAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H   +    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVMNGYEVGGGSVRIHSGAMQSAVFDILGINEQEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR+VMLL G +N+R+V  FP +      L  +PS  +   L+EL + +   
Sbjct: 536 DRLVMLLTGTENIRDVIAFPKTTAAACPLTDAPSRANPAALQELSIAVCAK 586


>gi|319778843|ref|YP_004129756.1| Aspartyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317108867|gb|ADU91613.1| Aspartyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 598

 Score =  624 bits (1610), Expect = e-176,   Method: Composition-based stats.
 Identities = 227/596 (38%), Positives = 340/596 (57%), Gaps = 10/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT   G +    +   V L GW HR R HGG+IFLD+RD  G+ Q+V +PD    F+IA+
Sbjct: 3   RTCYVGKVNTEYLNKTVTLYGWCHRRRDHGGVIFLDLRDREGLAQIVFDPDNEEAFKIAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + GLV +R   TIN ++ +G+IE+  +++EIL+ +   P  +  E    E+
Sbjct: 63  TIRNEYCVRVTGLVRNRPEGTINKDLYSGEIEVLCKEVEILNPSVTPPFQLDDENLS-ET 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR  +R +DLRR  +  N++ R R+    R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 122 IRLTHRIIDLRRPVMQNNMMLRYRVAIESRKFLDELGFIDIETPMLTRSTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQ+LM +G+DRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 182 SRVHDGQFYALPQSPQLFKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+       +++ F  + +D+A+ R+G+DKPD+R  +    +T
Sbjct: 241 LNEKEIRDIFEAMMRHVFKAVKGIE-LADPFPVMTWDEAMGRFGSDKPDMRISLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E     +F+VF    ++  G  V      GG  +R   D   ++    G  GLAYI    
Sbjct: 300 ELMKSVDFKVFQSAANMVGGRVVALRVPGGGALSRKEIDEYTQFVGIYGAKGLAYIKVNS 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI--- 420
              G      P+ K+++      I  R   QDGD  FF A             R  +   
Sbjct: 360 VAQGREGLQSPIVKNIDDATLSEIITRSGAQDGDLLFFGADKAKIVNDAMGALRVKLGLS 419

Query: 421 --AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
             A+E G      ++  W++DFP +E++EEE +   AH+PFT P+ G E L  +D     
Sbjct: 420 DFAKEHGFFEAG-WKPLWVVDFPMFEYDEEEGRYTAAHHPFTSPKDGHEDLLESDPSKAY 478

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R H  EV  + F  + I  +    +FG L  A Q G PPHGG
Sbjct: 479 AKAYDMVLNGWEVGGGSVRIHKEEVQSKVFRALKIGPDEAREKFGFLLDALQYGAPPHGG 538

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR+V L+ GA+++R+V  FP +Q   DLL+ +PS V  +QLREL +R+   
Sbjct: 539 LAFGLDRLVTLMAGAESIRDVIAFPKTQRAQDLLVQAPSEVDEKQLRELHIRLRNP 594


>gi|289434799|ref|YP_003464671.1| hypothetical protein lse_1434 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171043|emb|CBH27585.1| aspS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 591

 Score =  624 bits (1610), Expect = e-176,   Method: Composition-based stats.
 Identities = 230/597 (38%), Positives = 333/597 (55%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNETHIGQNVILHGWVQKRRDLGGLIFIDLRDREGIIQVVFNPETSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
             IA SVR+E+V+ I G V +RS   IN  + TG+IE+SA++I IL+ ++  P  +    
Sbjct: 60  LAIADSVRNEFVVTIKGKVSARSENAINEKLATGKIEISAEEITILNTSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +++I    E++L  V +E  N       F R+ Y +A+ R+G+DKPD+R  + 
Sbjct: 239 LETSFLTKEEIQTITEDMLIDVVKEAKNITI-QKPFPRMTYKEAMDRFGSDKPDIRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + NV+E     +F+VF   +      +           +R   D +  +  + G  GLA+
Sbjct: 298 LQNVSEVVKDVDFKVFQSAVENGGEVKAINAKGAATNFSRKDLDALGVFVANYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E+G +   GP+AK       + +   L  +DGD   F A       +     RN
Sbjct: 358 LKV---EAGELK--GPIAKFFQAEKAQELMAALQAEDGDLLLFAADKAEVVAASLGALRN 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + 
Sbjct: 413 KLGKELALINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVM 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV    F  +G + E    +FG L  A + G PPHGG
Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDEAASEQFGFLMEALEYGTPPHGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 533 IALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLATVKKE 589


>gi|188025998|ref|ZP_02960488.2| hypothetical protein PROSTU_02440 [Providencia stuartii ATCC 25827]
 gi|188021211|gb|EDU59251.1| hypothetical protein PROSTU_02440 [Providencia stuartii ATCC 25827]
          Length = 601

 Score =  624 bits (1610), Expect = e-176,   Method: Composition-based stats.
 Identities = 218/594 (36%), Positives = 329/594 (55%), Gaps = 7/594 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFE 60
           +  RT+ CG L ++  G  V L GWV+R R  GG+IF+D+RD  G+ QV  +P+    FE
Sbjct: 10  YCMRTNYCGQLNIAHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGVVQVFFDPERKDLFE 69

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +R+E+ + I G V +R     N ++ TG+IE+ A+ + + + +E   LP+   +  
Sbjct: 70  KASELRNEFCIQITGTVRARPDNQKNKDMATGEIEIFAEDLNVFNKSEP--LPLDSNQSN 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR  + + +  R +I + +R  M  E FI+  TP+LT ++PEGARD+
Sbjct: 128 TEERRLKYRYLDLRRPEMSERLRTRAKITSFVRNFMDKEGFIDVETPMLTKATPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 188 LVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVE 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  + +   ME ++R ++ +    +    +F  + + +A+RRYG+DKPDLRNP+ + 
Sbjct: 247 TSFMTAEQVREIMERMIRQLWLDVKGVD--LGDFPIMTFAEAMRRYGSDKPDLRNPMELV 304

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V +   + EF VFS   +   G  V      G    R   D   ++    G  GLA++ 
Sbjct: 305 DVADIVKNVEFAVFSGPANDPKGRVVALKVPNGAVMTRKQIDEYGQFVSIYGAKGLAWMK 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                 G      PVAK LN      +  R +  DGD   F AG            R  +
Sbjct: 365 VNERAKGLEGIQSPVAKFLNEDVINQLLERTEAADGDILLFGAGAKNVVTDSMGALRLKV 424

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++  + + N ++  W++DFP +E +  E  +   H+PFT P+         +     A 
Sbjct: 425 GRDFELADLNSWKPLWVIDFPMFEED-GEGGLSAMHHPFTSPRDYSPEDLAKNPEEAVAN 483

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H SE+    F+ +GI++     +FG L  A + G PPH G+A
Sbjct: 484 AYDMVINGYEVGGGSVRIHRSEMQQTVFNILGINEHEQREKFGFLLDALKYGTPPHAGLA 543

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+VMLL G  N+R+V  FP +     LL  +PS  + + L EL + +   
Sbjct: 544 FGLDRLVMLLTGTDNIRDVIAFPKTTAAACLLTSAPSQANPDALTELAISVDAK 597


>gi|241766054|ref|ZP_04763970.1| aspartyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241363935|gb|EER59223.1| aspartyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 614

 Score =  624 bits (1610), Expect = e-176,   Method: Composition-based stats.
 Identities = 227/600 (37%), Positives = 341/600 (56%), Gaps = 15/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG +  + +G  V LSGWV+R R HGG+IF+D+RD  G  QVV +PD    F+ A+
Sbjct: 14  RSHYCGLVTEALLGQTVTLSGWVNRRRDHGGVIFIDLRDREGSVQVVCDPDRAEMFKTAE 73

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + G+V +R A T N N+ +G+IE+   ++ +L+ +   P     E    E+
Sbjct: 74  EVRNEFCVQVKGVVRARPAGTTNDNLQSGKIEVLCHELNVLNPSVTPPFQ-IDEENLSET 132

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N++ R R+   +R  + A  FI+  TP+LT S+PEGARD+LVP
Sbjct: 133 TRLTHRVLDLRRPYMQNNLMLRYRVSMEVRKFLDANGFIDIETPMLTKSTPEGARDYLVP 192

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 193 SRVHDGHFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 251

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ +I +  + +++ VF+     +     F  + Y DA  RYG+DKPDLR  +    +T
Sbjct: 252 MDEQEIRDMFQGMIKTVFQNTLGVDLGE--FPVMTYQDAAYRYGSDKPDLRVKLEFTELT 309

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPA----KGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           +     +F+VFS   ++  G  V         +GGG +R   D   E+ +  G  GLAYI
Sbjct: 310 DVMKDVDFKVFSGAANMKNGRVVGLRVPGGSVEGGGISRGEIDAYTEFVKIYGAKGLAYI 369

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G      P+ K+++    +A+  R   QDGD  FF A             R  
Sbjct: 370 RVNELAKGRDGLQSPIVKNIHDAALQAVLERTGAQDGDLIFFGADKEKIVNDAIGALRIK 429

Query: 420 IA-----QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           I      ++ G+ + + +   W++DFP +E +EE  +    H+PFT P+ G E       
Sbjct: 430 IGHSEFGKKNGLFD-DRWAPLWVVDFPMFEHDEESDRWVAVHHPFTAPKDGHEDYMVTAP 488

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               +  YD+V NG+E+  G +R H ++V  + F  + I+ E  + +FG L  A Q G P
Sbjct: 489 EKCISKGYDMVLNGWEMGGGSVRIHRADVQQKVFDALKITPEEAQQKFGFLLDALQYGAP 548

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DRIV L+ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+   
Sbjct: 549 PHGGLAFGLDRIVTLMTGAESIRDVIAFPKTQRAQCLLTQAPSVVDEKQLRELHIRLRNP 608


>gi|88811080|ref|ZP_01126336.1| aspartyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88791619|gb|EAR22730.1| aspartyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 595

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 234/599 (39%), Positives = 336/599 (56%), Gaps = 6/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG++  + +G  V + GWVHR R HGG+IF+D+RD  G+ QVV +PD +  F+ A 
Sbjct: 2   RTHYCGEVAEALLGEEVEVCGWVHRRRDHGGVIFIDLRDREGLLQVVFDPDVAGAFQAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL + G V  R   T N ++ TG +E+  Q++EIL+ A+  P     E +  E 
Sbjct: 62  RVRSEYVLRVRGKVRRRPEGTENLSLNTGLVEVFGQELEILNRAKTPPFQ-LDEVDVGED 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR++DLRR  + + +  R R+   +R  +    F++  TP+LT ++PEGARDFLVP
Sbjct: 121 VRLKYRYIDLRRQAMQQQLRTRARVAGVLRRYLDRHGFVDVETPMLTRATPEGARDFLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR++QGSFYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF QLD+E SF
Sbjct: 181 SRLHQGSFYALPQSPQLFKQLLMISGLDRYYQIVRCFRDEDLRADRQP-EFTQLDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++  I+  ME ++R +F E      +   F R+ Y +A++R+G D+PDLR P+ +  V 
Sbjct: 240 LDESAIMALMEGMIRELFREVLAVE-LPEPFPRMSYAEALQRFGIDRPDLRIPLELVEVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF+   +   G         GG  +R   D    +    G  GLAYI    
Sbjct: 299 DLMAAVEFKVFAGPANDPKGRVAALRVPGGGELSRKAIDDYTRFVTRYGAKGLAYIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K L       I  R   + GD  FF A          A  R  +  E
Sbjct: 359 PARGREGLQSPILKFLPGSAVTGILERTAAEAGDLIFFGADRAKVVNESLAALRIKLGHE 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG++    +   W++DFP +E++E +++    H+PFT P+        +D   + +  YD
Sbjct: 419 LGLVEPG-WRPLWVIDFPMFEYDETDRRFYALHHPFTAPRMSDPEQLRDDPQRLLSRAYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG E+  G +R H  E+    F  +GI  E    +FG L  A + G PPHGGIA G+
Sbjct: 478 LVLNGTELGGGSVRIHRPEMQYAVFDLLGIGAEEAREKFGFLLEALEYGAPPHGGIAFGL 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           DR++MLL G  ++REV  FP +Q    LL  +P+ V    LRELG+R    P   +K+ 
Sbjct: 538 DRMIMLLTGVGSIREVMAFPKTQTASCLLTQAPAPVEEAALRELGIR-ARKPVDAVKVD 595


>gi|289207699|ref|YP_003459765.1| aspartyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943330|gb|ADC71029.1| aspartyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 594

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 224/594 (37%), Positives = 337/594 (56%), Gaps = 5/594 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG +  +++ S V L GWV+R R HGG+IF+D+RDH G+ QVV +PD    F  A+
Sbjct: 2   RTHLCGRVTENELDSEVTLCGWVNRRRDHGGVIFVDLRDHAGLVQVVFDPDREEVFARAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+V+ + G V  R   T N ++ TG +E+   ++E+L+ A+  P P+  E +  E 
Sbjct: 62  QLRSEYVIRMTGRVRRRPEGTENPDLTTGAVEILGLELEVLNAAKTPPFPLDDE-DVGED 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR++DLRR  + + +  R ++  +MR  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 TRLRYRYMDLRRPVMQQRLRLRAQVTAAMRRFLETREFLDLETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF QLDMEM+F
Sbjct: 181 SRTHPGSFFALPQSPQLFKQLLMMSGMDRYYQITRCFRDEDLRADRQP-EFTQLDMEMAF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V++ D+++  E ++R +F E      + + F R+ Y +A+ R+G+DKPDLR P+    +T
Sbjct: 240 VDEADVMDVTEGLIRHLFREVQGVE-LPDPFPRMAYAEAMARFGSDKPDLRIPLEFTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E     EF+VF+   +   G         G    R   D   E+    G  GLAYI    
Sbjct: 299 EVMQAVEFKVFNGPANDPEGRVAALRVPGGAKLTRKEIDVYTEYVGRYGAKGLAYIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
                     P+ K L    T  I  +     GD  FF A             R  +  +
Sbjct: 359 PADLEGGLQSPILKFLPEDVTRQILEKTAAAAGDLIFFGADKASVVNEAIGALRVKLGHD 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++    ++  W++DFP +E+++ +K++   H+PFT P          +     +  YD
Sbjct: 419 LELVEAG-WQPLWVVDFPMFEYDDGDKRLYALHHPFTAPAVDSPDALRANPREALSRAYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  E+   AF  +GI ++    +FG L  A + G PPHGG+A G+
Sbjct: 478 MVLNGTEVGGGSIRIHNPEMQQAAFEALGIGEDEAREKFGFLLDALEFGAPPHGGLAFGL 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+VML+ GA ++R+V  FP +Q    LL  +P+ V  +QLRELG+R+  +  +
Sbjct: 538 DRLVMLMSGAHSIRDVMAFPKTQTAACLLTDAPAPVGEKQLRELGIRLRASATQ 591


>gi|187932291|ref|YP_001892276.1| aspartyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187713200|gb|ACD31497.1| aspartyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 592

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 346/595 (58%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 4   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 64  LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 123

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 124 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 183

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 184 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 242

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E       +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 243 DEAFIMSTMERMIAGLFKETIGVEF-ATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 301

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 302 DMQNEEFKVFSGP-ANDPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 361 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 420

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E ++   ++   H+PFT P+   +E L   +   + +  
Sbjct: 421 DLDLFNKD-WAPLWVVDFPMFEKDD--NRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS +    +FG +  A   G P HGGIA 
Sbjct: 478 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ + +  +
Sbjct: 538 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAVKKEER 592


>gi|118496744|ref|YP_897794.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|118422650|gb|ABK89040.1| aspartyl-tRNA synthetase [Francisella novicida U112]
          Length = 592

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 227/595 (38%), Positives = 346/595 (58%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 4   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 64  LRSEFVIKAEGVVNLRPEGQENKNIASGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 123

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 124 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 183

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 184 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 242

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E       +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 243 DEAFIMSTMERMIAGLFKETIGVEF-ATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 301

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 302 DMQNEEFKVFSGP-ANDPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 361 SLSQGKDGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 420

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E ++   ++   H+PFT P+   +E L   +   + +  
Sbjct: 421 DLDLFNKD-WAPLWVVDFPMFEKDD--NRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS E    +FG +  A   G P HGGIA 
Sbjct: 478 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ + +  +
Sbjct: 538 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAVKKEER 592


>gi|313633166|gb|EFS00050.1| aspartyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 591

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 333/597 (55%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNETHIGQNVILHGWVQKRRDLGGLIFIDLRDREGIIQVVFNPETSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
             IA SVR+E+V+ I G V +RS   IN  + TG+IE+SA+KI IL+ ++  P  +    
Sbjct: 60  LAIADSVRNEFVVTIKGKVSARSENAINEKLATGKIEISAEKITILNTSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +++I    E++L  V +E  N       F R+ Y +A+ R+G+DKPD+R  + 
Sbjct: 239 LETSFLTKEEIQAITEDMLIDVVKEAKNVTI-QKPFPRMTYKEAMDRFGSDKPDIRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + NV+E     +F+VF   +      +           +R   D +  +  + G  GLA+
Sbjct: 298 LQNVSEVVKDVDFKVFQSAVENGGEVKAINAKGAATNFSRKDLDALGVFVANYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E+G +   GP+AK       + +   L  +DGD   F A       +     RN
Sbjct: 358 LKV---EAGELK--GPIAKFFQAEKAQELMAALQAEDGDLLLFAADKAEIVAASLGALRN 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + 
Sbjct: 413 KLGKELDLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVM 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV    F  +G + E    +FG L  A + G PPHGG
Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDEAASEQFGFLMEALEYGTPPHGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 533 IALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLVELKLATVKKE 589


>gi|300309541|ref|YP_003773633.1| aspartyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300072326|gb|ADJ61725.1| aspartyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 599

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 226/597 (37%), Positives = 339/597 (56%), Gaps = 10/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG    + +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 2   RTQYCGLTTEALLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRADVFKNAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+ L I GLV +R   T NAN+ +G+IE+   ++E+L+ +   P  +  +    E+
Sbjct: 62  SVRNEFCLRITGLVRNRPEGTTNANLKSGKIEVLCHELEVLNPSVTPPFQLDDDSLS-ET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPQMQNNLRLRYKVAMEVRKFLDAQGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 181 SRVNAGEFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+   + + + N F  + +  A+ +YG+DKPD+R  +    +T
Sbjct: 240 LNEQEIRDLFEGMIRLVFKNALDID-LPNPFPVMDFATAMGKYGSDKPDMRVKLEFTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G  V      G    R+  D   ++    G  GLAYI    
Sbjct: 299 DVMKDVEFKVFSGAANSEGGRVVGLRVPGGAEMPRSEIDAYTQFVAIYGAKGLAYIKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+++     AI  +   QDGD  FF A             R  I   
Sbjct: 359 KAKGRDGLQSPIVKNIHDAALNAILEKTGAQDGDLIFFGADKAKVVNDAIGALRVKIGHS 418

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              ++ G+ + + +   W++DFP +E++E+ ++    H+PFT P+ G E     +  +  
Sbjct: 419 EFGKKNGLFD-DAWRPLWVVDFPMFEYDEDGQRWVALHHPFTSPKDGHEDFISTNPGAAI 477

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R H ++V  + F  + I  E  + +FG L  A Q G PPHGG
Sbjct: 478 AKAYDMVLNGWELGGGSVRIHRADVQSKVFRALKIDDEEAKLKFGFLLDALQYGAPPHGG 537

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DR+V ++ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+    
Sbjct: 538 IAFGLDRLVTMMAGAESIRDVIAFPKTQRAQCLLTHAPSEVDEKQLRELHIRLRNTE 594


>gi|145632568|ref|ZP_01788302.1| aspartyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144986763|gb|EDJ93315.1| aspartyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 588

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 218/592 (36%), Positives = 333/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++   LP+   +   E 
Sbjct: 63  SLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++  ++ +    +     F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHDLWLDTIGVD--LGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVEFKVFNEPANNPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R++ Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFSPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+  
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVKAE 588


>gi|264676936|ref|YP_003276842.1| aspartyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262207448|gb|ACY31546.1| aspartyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 601

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 219/596 (36%), Positives = 332/596 (55%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+  CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD    F++A+
Sbjct: 4   RSQYCGLVTEAQMGETVTLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRAEMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + G+V +R A T N  + +GQIE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  DVRNEFCVQVKGVVRARPAGTTNDKLKSGQIEVLCHELNVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N++ R +    +R  +  E FI+  TP+L  S+PEGARD+LVP
Sbjct: 123 VRLTNRVMDLRRPVMQRNMMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGEFFALPQSPQLYKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    + +++ VF+   N +     F  + Y DA  R+G+DKPDLR  +    +T
Sbjct: 242 LNEEEIRAIFQRMIKEVFQTQLNVDLGE--FPIMTYQDAAFRFGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G  V      G   +R   D   E+ +  G  GLA+I    
Sbjct: 300 DIMGDVDFKVFSTPATTKGGRVVALRVPGGAAISRGEIDGYTEFVKIYGAKGLAWIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+L+      I  R   QDGD  FF A             R  +   
Sbjct: 360 VAKGREGLQSPIVKNLHDAAIAEILKRTGAQDGDLIFFGADKEKIVNDSIGALRLKVGHS 419

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              ++ G+   + +   W++DFP +E +EE  +    H+PFT P+ G E L   D     
Sbjct: 420 EFGKKSGLF-EDKWAPLWVVDFPMFEHDEESGRWVAVHHPFTSPKDGHEDLMDTDPGKCI 478

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R H ++V  + F  + I+ E    +FG L  A Q G PPHGG
Sbjct: 479 AKAYDMVLNGWELGGGSVRIHRADVQAKVFEALNITPEQQRAKFGYLLDALQYGAPPHGG 538

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR++ L+ G+ ++R+V  FP +Q   DLL  +PS V  +QLREL +++   
Sbjct: 539 LAFGLDRLITLMTGSDSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIKLRNP 594


>gi|148359007|ref|YP_001250214.1| hypothetical protein LPC_0892 [Legionella pneumophila str. Corby]
 gi|166225353|sp|A5IBW8|SYD_LEGPC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148280780|gb|ABQ54868.1| hypothetical protein LPC_0892 [Legionella pneumophila str. Corby]
          Length = 593

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 228/590 (38%), Positives = 334/590 (56%), Gaps = 4/590 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH C  +    +   + + GWVH  R HGG+IFLDIRD  G+ QVV  P+    F IA+
Sbjct: 2   RTHYCSAVNELSLDKQITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+V+ + G+V  R    IN  + TG++E+   ++EIL+ +   P      +   E 
Sbjct: 62  KLRSEFVVRVTGIVRKRPEGMINDKMETGRVEVIGTQLEILNQSPTPPFLPDDHQIINED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R+KYR++DLRR  + K +  R ++ + +R  +  +NF++  TP+LT ++PEGARD+LVP
Sbjct: 122 LRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF QLD+EM+F
Sbjct: 182 SRVHPGQFYALPQSPQLFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DIL  +E +L+ VF+E  N         R+ Y +A+ RYG+DKPDLRNP+ + ++ 
Sbjct: 241 INEEDILQLIEGLLKIVFKEILNITLPDKL-PRMSYKEAMTRYGSDKPDLRNPLELIDIA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F VFS   + N G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 300 DLVKDCDFNVFSSAANDNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVND 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K L+    ++I  R++ Q GD  FF A             RN +  +
Sbjct: 360 LSAGMAGLQSPILKFLSETAVQSILNRVEAQTGDVIFFGADKAHVVNESMGALRNKLGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             +IN + ++  W++D+P +E + +  K+   H+PFT PQ        +      A  YD
Sbjct: 420 RNLIN-SGWQLLWVVDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTLAKAYD 478

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+EI  G IR H  E+    F  +GI  +    +FG L  A Q G PPHGGIA GI
Sbjct: 479 IVINGYEIGGGSIRIHQPELQKTVFDLIGIGDQEAHEKFGFLLDALQYGAPPHGGIALGI 538

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           DR+ MLL  + ++R+V  FP +Q     L  +PS     QL ELG+R+  
Sbjct: 539 DRLAMLLTDSTSIRDVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLAP 588


>gi|186475150|ref|YP_001856620.1| aspartyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|238689443|sp|B2JCV5|SYD_BURP8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|184191609|gb|ACC69574.1| aspartyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 599

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 230/599 (38%), Positives = 330/599 (55%), Gaps = 8/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 4   RSEYCGLVTEHLLGQTVSLCGWVSRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFKTAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + G+V +R   T NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQVKGVVRNRPEGTTNAGLKSGKIEVLCHELNVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+   +R  + +  FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAMEVRKYLDSRGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E++ R VF+E      +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LSEQEIRDLFEDMTRHVFKETIGVE-LDAKFAVMPYSEAMSRFGSDKPDLRVKLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANTKDGRVAALRVPKGGELSRGDIDSYTEFVRIYGAKGLAWIKINE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+     AI  R   QDGD  FF A             R  I   
Sbjct: 361 VAKGRDGLQSPIVKNLHDAAIAAIIERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E++EEE +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVEAGWKPLWVVDFPMFEYDEEENRYVAAHHPFTSPKDEHLEYLETDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R    +V  + F  + I  E    +FG L  A Q G PPHGGI
Sbjct: 481 KAYDIVLNGWEIGGGSVRIFQEDVQSKVFRALKIGAEEARLKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+ +  +K 
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSEVDERQLRELHIRLRQPEQKA 599


>gi|299531498|ref|ZP_07044904.1| aspartyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298720461|gb|EFI61412.1| aspartyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 599

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 219/596 (36%), Positives = 332/596 (55%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+  CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD    F++A+
Sbjct: 2   RSQYCGLVTEAQMGETVTLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRAEMFKVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + G+V +R A T N  + +GQIE+   ++ +L+ +   P  +  +    E+
Sbjct: 62  DVRNEFCVQVKGVVRARPAGTTNDKLKSGQIEVLCHELNVLNASVTPPFQLDDDNLS-ET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N++ R +    +R  +  E FI+  TP+L  S+PEGARD+LVP
Sbjct: 121 VRLTNRVMDLRRPVMQRNMMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 181 SRVHDGEFFALPQSPQLYKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    + +++ VF+   N +     F  + Y DA  R+G+DKPDLR  +    +T
Sbjct: 240 LNEEEIRAIFQRMIKEVFQTQLNVDLGE--FPIMTYQDAAFRFGSDKPDLRVKLEFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G  V      G   +R   D   E+ +  G  GLA+I    
Sbjct: 298 DIMGDVDFKVFSTPATTKGGRVVALRVPGGAAISRGEIDGYTEFVKIYGAKGLAWIKVNE 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+L+      I  R   QDGD  FF A             R  +   
Sbjct: 358 VAKGREGLQSPIVKNLHDAALTEILKRTGAQDGDLIFFGADKEKIVNDSIGALRLKVGHS 417

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              ++ G+   + +   W++DFP +E +EE  +    H+PFT P+ G E L   D     
Sbjct: 418 EFGKKSGLF-EDKWAPLWVVDFPMFEHDEESGRWVAVHHPFTSPKDGHEDLMDTDPGKCI 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R H ++V  + F  + I+ E    +FG L  A Q G PPHGG
Sbjct: 477 AKAYDMVLNGWELGGGSVRIHRADVQAKVFEALNITPEQQRAKFGYLLDALQYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR++ L+ G+ ++R+V  FP +Q   DLL  +PS V  +QLREL +++   
Sbjct: 537 LAFGLDRLITLMTGSDSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIKLRNP 592


>gi|325294844|ref|YP_004281358.1| aspartyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065292|gb|ADY73299.1| aspartyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 611

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 228/595 (38%), Positives = 338/595 (56%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG++  SD+G  V+L+GWV   R HGG++F D+RD  G  Q+V +P+      E A
Sbjct: 26  RTSYCGEVSASDIGKKVKLAGWVDTTRDHGGVVFTDLRDRTGKIQIVFSPEISEELVEKA 85

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K ++ E+V+ I+G V  R + T N  + TG++E+ A+K++IL+ +  LP PV  + +  E
Sbjct: 86  KKLKDEYVVAIEGEVRRRPSGTENPKLKTGEVEVYAEKLKILNKSLPLPFPVDDDVKVGE 145

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLDLRR  +  NI+ R ++    R     E FIE  TP LT S+PEGARDFLV
Sbjct: 146 DIRLKYRFLDLRRKKMMDNIIFRHKLYQITRNVFNEEGFIEIETPFLTKSTPEGARDFLV 205

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDED R+DR P EF Q+D EMS
Sbjct: 206 PSRIYPGKFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEDLRADRQP-EFTQVDFEMS 264

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV + D++N  E VLR +++E             + YD+A+ R+GTD+PD R  + +  +
Sbjct: 265 FVREKDVMNIAEKVLRRLYKELLGIEIGE--IPVMSYDEAMSRFGTDRPDTRFGLELKEI 322

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+      F+VF  +       +       G   +R   D + ++    G  GLA+I   
Sbjct: 323 TDIAEKCSFKVFRMVTENGGIVKAINFK-GGATLSRKEIDDLTKFVGIYGAKGLAWIKVT 381

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                      P+ K         I  RL+ + GD  FF+A  P    +  ++ R  + +
Sbjct: 382 DK-----GLQSPIVKFFTEGEINEILKRLEAEVGDILFFVADKPDVVNAALSNLRLKLGK 436

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              +I+ +     WI+DFP +EWNE+E + +  H+PFT P+         D   ++A  Y
Sbjct: 437 MADLIDDSKINVLWIVDFPMFEWNEDENRWEALHHPFTSPKEEDVEKLLEDPGKVRARAY 496

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR +  ++  + F  +G+S E  + RFG L  A + G PPHGG+A G
Sbjct: 497 DMVLNGVEVGGGSIRIYREDIQEKVFKVIGLSDEEAKERFGFLLEALKYGAPPHGGMAFG 556

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+  ++ G +++R+V  FP +Q    LL G+P TV  EQL EL + I +  ++
Sbjct: 557 LDRLCAIMRGEESIRDVIAFPKTQRGQCLLTGAPDTVRPEQLEELHIEITKEEEE 611


>gi|309791721|ref|ZP_07686211.1| aspartyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308226214|gb|EFO79952.1| aspartyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 586

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 250/591 (42%), Positives = 345/591 (58%), Gaps = 6/591 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEI 61
            YR+H+CG+L    VG  V L+GWVHR R HG +IF+D+RD YGITQVV +  S     +
Sbjct: 1   MYRSHTCGELRQEHVGQEVTLAGWVHRRRDHGPLIFVDLRDRYGITQVVFDSQSPEVHAV 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+  RSE+VL + G+V SR  E  N  + TG IE++A    +L+ A   PL +  E    
Sbjct: 61  AEEARSEFVLQVRGVVRSRPPEAHNPELATGDIEVTATSATVLNPARTTPLYIAKEGGED 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR+ + +N++ R R+I  MR  + AE F+E  TPIL  S+PEGARD+L
Sbjct: 121 EALRLKYRYLDLRRERMQRNMILRHRVIKFMRDFLDAEGFLEIETPILIKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ GSFYALPQ+PQQ KQLLM +G+D+YFQ+A CFRDED R+DR P EF QLDMEM
Sbjct: 181 VPSRVHPGSFYALPQSPQQLKQLLMVAGYDKYFQVARCFRDEDQRADRQP-EFTQLDMEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D+++ +E +   +         V   F R+ Y +A+ RYG+DKPDLR  + + N
Sbjct: 240 SFVEQEDVISLIERLFTQLCAAVVPHKRVLTPFPRLSYAEAMERYGSDKPDLRYGLELIN 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    + F VF   L      +   +P  G    R   D + E  R  G  GLA+   
Sbjct: 300 LSDLLTATPFNVFKGALEQGGQVKGLRLPGCGN-YTRKQLDELIEMVRGSGGKGLAWAAL 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D           AK L      AI  R+  Q GD    +A       +     R   A
Sbjct: 359 PADGG---DVRSSFAKLLAPGEMAAIIERMQAQPGDLLLIVADKASSVAAALDKLRRLFA 415

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L + + +   F W++DFP  +WN +E + D  H+PFT P    + L  +D   ++A  
Sbjct: 416 ERLNLADPDLLHFSWVLDFPLLDWNPDENRWDAVHHPFTAPHAEDQPLLASDPAKVRAQA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+  G IR H  +V  + F  +GIS+E  +++FG +  AF+ G PPHGGIA 
Sbjct: 476 YDLVLNGYEVGGGSIRIHRRDVQQRIFELLGISEETAQSQFGHMLEAFEYGAPPHGGIAP 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDRIVMLL     +REV  FP +Q   DL+  +PS V   QL+EL + + 
Sbjct: 536 GIDRIVMLLADESTIREVMAFPKTQQAADLMTNAPSEVDERQLKELHITLR 586


>gi|53729050|ref|ZP_00134141.2| COG0173: Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208619|ref|YP_001053844.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|165976576|ref|YP_001652169.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|307246064|ref|ZP_07528146.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307250405|ref|ZP_07532352.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307255046|ref|ZP_07536864.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307259482|ref|ZP_07541207.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|166225314|sp|A3N1F3|SYD_ACTP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238687571|sp|B0BQ90|SYD_ACTPJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|126097411|gb|ABN74239.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
 gi|165876677|gb|ABY69725.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|306852999|gb|EFM85222.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306857534|gb|EFM89643.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306861919|gb|EFM93895.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306866418|gb|EFM98281.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 591

 Score =  624 bits (1609), Expect = e-176,   Method: Composition-based stats.
 Identities = 218/593 (36%), Positives = 337/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S VG  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+IA 
Sbjct: 3   RSHYCGALNRSHVGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKIAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE  + I G V++R    IN  + TG+IE+  + + + + A+   LP+   +   E 
Sbjct: 63  SLRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNVVVYNNAD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHNGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   MEN++ G++ +  N +     F  + + +A++R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAEEVRELMENMIHGLWLDRLNVD--LGKFPIMTWQEAMQRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DILKDVEFKVFNEPANSADGRVTVLRVPNGASLTRKQIDEYTQFVGIYGAKGLAWAKINN 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN    +A+  R +   GD  FF A             R  + ++
Sbjct: 358 VNAGMEGIQSPVAKFLNEEVFKALIERTNATSGDILFFGADKWQVVTDSMGALRLKVGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + ++  W++DFP +E + +E  +   H+PFT P+         + ++  A  YD
Sbjct: 418 LALTDLSAWKPLWVIDFPMFEKD-DEGNLSAMHHPFTSPKNLTPEELAANPVNAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R +  ++    F  +GI+++  + +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIYDPKMQQTVFGILGINEQDQQEKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L ELG+ +++  K
Sbjct: 537 DRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELGIAVLKKEK 589


>gi|197336170|ref|YP_002155712.1| aspartyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|238690280|sp|B5FCP9|SYD_VIBFM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|197317660|gb|ACH67107.1| aspartyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 591

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 218/594 (36%), Positives = 326/594 (54%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG+L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD    FE+A 
Sbjct: 2   RTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDVFEVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ +   G V  R    +N ++ TG++EL A  +EI++ +    LP+   +   E 
Sbjct: 62  QLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELLATGLEIINRS--AALPLDFNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR++DLRR  +   I  R R  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVRRFLDENLFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++ N  E ++  +++E  +       F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTSQEVRNVTERLVHDMWKELLDVE--LGQFPVMPFSEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G       + G   +R   D    +    G  GLA++    
Sbjct: 297 DLVKDVDFKVFSGPANDEKGRVAVIRVSGGASLSRKQIDEYGNFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN     AI  R   + GD   F A             R  +  +
Sbjct: 357 RAAGFEGVQSPVAKFLNEEVINAILERTQAETGDIILFGADKAGIVSEAMGALRLKLGTD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E +  E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LELTDTSAWAPLWVVDFPMFEED-GEGNLHAMHHPFTSPLGVSAEELQANPAAANSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNAEMQTAVFGILGIEAQEQQEKFGFLLEALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+ MLL G +N+R+V  FP +     LL  +PS  +   L EL + +    KK
Sbjct: 536 DRLAMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAVKLAEKK 589


>gi|15602848|ref|NP_245920.1| aspartyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|13431885|sp|P57895|SYD_PASMU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|12721309|gb|AAK03067.1| AspS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 588

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 218/592 (36%), Positives = 333/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH CG L   ++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRDNIGQEVTLSGWVHRRRDLGGLIFIDMRDREGIVQVCFDPVYQEALTTAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+ + I G V++R    IN N+ TG++E+ A+ + I + AE   LP+   +   E 
Sbjct: 63  SLRNEFCIQIKGEVIARPDNQINKNMATGEVEVLAKSLSIYNSAEP--LPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDEHGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++ E    +     F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMEKMVHGLWRETLGVD--LGKFPVMTFAEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF+   +   G         G    R   D   ++    G  GLA++    
Sbjct: 298 DLLKEVEFKVFNGPANDPNGRIAVIRVPNGTDITRKQIDEYTQFVGIYGAKGLAWLKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+    +A+  R+  Q+GD  FF A +           R  + ++
Sbjct: 358 LAAGMDGVQSPIAKFLSEAVLKALLERVQAQNGDILFFGADNYKVTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+     ++  W++DFP +E + +E  +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTKLEEWQPLWVIDFPMFERD-DEGDLAAMHHPFTSPKDFSPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI++     +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGINEAEQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G  N+R+V  FP +     L+  +PS  + + L EL ++++++ 
Sbjct: 537 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPQALNELSVQVIKSE 588


>gi|254372109|ref|ZP_04987602.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151569840|gb|EDN35494.1| aspartyl-tRNA synthetase [Francisella novicida GA99-3549]
          Length = 592

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 225/595 (37%), Positives = 345/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 4   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 64  LRSEFVIKAEGVVNLRPEGQENKNIASGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 123

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 124 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 183

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 184 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 242

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++ ME ++ G+F+E       +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 243 DEAFIMSAMERMIAGLFKETIGVEF-ATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 301

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 302 DMQNEEFKVFSGP-ANDPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 361 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 420

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E ++   ++   H+PFT P+   +E L   +   + +  
Sbjct: 421 DLDLFNKD-WAPLWVVDFPMFEKDD--NRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS +    +FG +  A   G P HGGIA 
Sbjct: 478 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ + +  +
Sbjct: 538 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAVKKEER 592


>gi|145631434|ref|ZP_01787204.1| aspartyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144982971|gb|EDJ90480.1| aspartyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 588

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 217/592 (36%), Positives = 332/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++  ++ +    +     F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHDLWLDTIGVD--LGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVEFKVFNEPANNPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R++ Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWKPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFSPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+  
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVKAE 588


>gi|83647606|ref|YP_436041.1| aspartyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|97196688|sp|Q2SCK8|SYD_HAHCH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|83635649|gb|ABC31616.1| aspartyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 590

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 216/594 (36%), Positives = 338/594 (56%), Gaps = 9/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG++  S V   V L GWVHR R HGG+IFLD+RD  GI QVV +PD+   F++A+
Sbjct: 2   RSHYCGEVNESLVDQEVTLCGWVHRRRDHGGVIFLDLRDRDGIAQVVYDPDTNEVFQLAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R E+V+ + G V  R     N ++ TG +E+  +++EILS A+  P  +    +  E 
Sbjct: 62  QIRDEFVVKVTGRVRLRPEGKANTDMSTGMVEVLGKQLEILSTAKTPPFQLDEFVQVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR++DLRR  +   +  R+++ + +R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLRYRYMDLRRPEMLNKLRFRSKVTSYIRNFLDGNGFMDVETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++GSF+ALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHEGSFFALPQSPQLFKQLLMMSGVDRYYQIAKCFRDEDLRADRQP-EFTQVDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I++  E ++R +F +          F R+ + +A+ RYG+DKPDLR P+ + +V 
Sbjct: 241 LNENEIMSITERLVRDMFRDLLEVELPE--FPRMPFSEAMNRYGSDKPDLRIPLELVDVG 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   +  F VFS   +            KGG   +R   D   ++    G  GL YI   
Sbjct: 299 DLLTNVSFNVFSGPANDPKSRVAALRLPKGGELLSRKQIDDYTKFVGIYGAKGLPYIKVN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ KH+     + +  R+  +DGD  FF               R  +  
Sbjct: 359 EKAKGLDGLQSPIVKHIADA-IDPLLERVGAEDGDIIFFGTDKTRVVNEALGALRVKLGH 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L ++    +   W++DFP +E +  E      H+PFT P   +E +  +D  +  +  Y
Sbjct: 418 DLNLLEK-QWAPLWVVDFPMFEED-GEGGWTAIHHPFTAPSCAVE-MLESDPENALSRAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R H S++       +GI ++    +FG L  A + G PPHGG+A G
Sbjct: 475 DMVLNGTELGGGSVRIHDSDMQETVLRILGIGQDEAREKFGFLLDALKFGCPPHGGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR+VML+ GA+++REV  FP +Q+   ++  +P  V  +QLREL +R+ +  +
Sbjct: 535 LDRLVMLMTGAQSIREVIAFPKTQSAMCMMTQAPGKVDPKQLRELNIRLRKTEQ 588


>gi|190150477|ref|YP_001969002.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307257203|ref|ZP_07538975.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|307261631|ref|ZP_07543299.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|307263821|ref|ZP_07545426.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|238692343|sp|B3GY37|SYD_ACTP7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189915608|gb|ACE61860.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306864365|gb|EFM96276.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306868754|gb|EFN00563.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306870810|gb|EFN02549.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 591

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 218/593 (36%), Positives = 337/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S VG  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+IA 
Sbjct: 3   RSHYCGALNRSHVGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKIAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE  + I G V++R    IN  + TG+IE+  + + + + A+   LP+   +   E 
Sbjct: 63  SLRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNVVVYNNAD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHNGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   MEN++ G++ +  N +     F  + + +A++R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAEEVRELMENMIHGLWLDRLNVD--LGKFPIMTWQEAMQRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DILKDVEFKVFNEPANSADGRVTVLRVPNGASLTRKQIDEYTQFVGIYGAKGLAWAKIND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN    +A+  R +   GD  FF A             R  + ++
Sbjct: 358 VNAGMEGIQSPVAKFLNEEVFKALIERTNATSGDILFFGADKWQVVTDSMGALRLKVGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + ++  W++DFP +E + +E  +   H+PFT P+         + ++  A  YD
Sbjct: 418 LALTDLSAWKPLWVIDFPMFEKD-DEGNLSAMHHPFTSPKNLTPEELAANPVNAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R +  ++    F  +GI+++  + +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIYDPKMQQTVFGILGINEQDQQEKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L ELG+ +++  K
Sbjct: 537 DRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELGIAVLKKEK 589


>gi|56707192|ref|YP_169088.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110669662|ref|YP_666219.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|254371406|ref|ZP_04987407.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875668|ref|ZP_05248378.1| aspS, aspartyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56603684|emb|CAG44640.1| Aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110319995|emb|CAL08023.1| Aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569645|gb|EDN35299.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254841667|gb|EET20103.1| aspS, aspartyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 592

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 227/595 (38%), Positives = 346/595 (58%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 4   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 64  LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 123

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 124 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 183

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 184 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 242

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E       +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 243 DEAFIMSTMERMIAGLFKETIGVEF-ATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 301

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 302 DMQNEEFKVFSGP-ANDPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 361 SLSQGKEGLQSPIVKNISEETLFKVIDKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 420

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E ++   ++   H+PFT P+   +E L   +   + +  
Sbjct: 421 DLDLFNKD-WAPLWVVDFPMFEKDD--NRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS +    +FG +  A   G P HGGIA 
Sbjct: 478 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GIDR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ + +  +
Sbjct: 538 GIDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAVKKEER 592


>gi|163751781|ref|ZP_02158998.1| aspartyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161328345|gb|EDP99505.1| aspartyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 595

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 217/586 (37%), Positives = 331/586 (56%), Gaps = 6/586 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CGD+  S VG  V L GWV+R R  GG++FLD+RD  GI QVV +PD    F++A 
Sbjct: 2   RSQYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIIQVVYDPDLPEVFDVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE+ + I G+V +R    IN  + TG+IE+  +++ IL+ +  LP+ +   +   E 
Sbjct: 62  SLRSEFCVQIKGVVSARPDSQINDKMRTGEIEILGKELTILNSSAPLPINMDKNQHNTEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + I+ R ++ + +R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAERIIFRAKVTSVVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +++  E ++R +F+E  + +     F ++ + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MSSAQVMDKTEEMMRSLFKELLDVDLGE--FPKMTFAEAMRRFGSDKPDLRNPLELIDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF    +   G         G   +R   D+  ++A   G  GLA++    
Sbjct: 299 DLLTDVDFKVFQGPATDPEGRVAVLCIPGGAKLSRKQLDQYAKYATIYGAKGLAWMKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G      PV K LN    +A+  R   + GD   F A             R    ++
Sbjct: 359 LDKGLEGIQSPVLKFLNEDVVKALLERTKAKSGDLILFGADKANIVAEAMGALRIKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++  + ++  W++DFP +E   +   +   H+PFT P G        D  +  +  YD
Sbjct: 419 FDLLKGD-WKPLWVVDFPMFEPTSD-GGLHAMHHPFTAPSGMTPEQLEADPTAAISDAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H SE+    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVLNGCELGGGSVRIHNSEMQTAVFRILGIEEEEANEKFGFLLEALRYGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           DRIVML+ GA ++R+V  FP +      L  +P   + EQL ELG+
Sbjct: 537 DRIVMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPEQLVELGI 582


>gi|167623848|ref|YP_001674142.1| aspartyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189082142|sp|B0TSA3|SYD_SHEHH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167353870|gb|ABZ76483.1| aspartyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 598

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 220/594 (37%), Positives = 336/594 (56%), Gaps = 6/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  GI QVV +PD    F++A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+ + I GLV +R    INA++ TG++E+   ++ IL+ +  LP+ +   +   E 
Sbjct: 62  TLRSEFCVQIKGLVRARPDSQINADMRTGEVEILGLELTILNSSAPLPINMDKNQHNTEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   IV R+++ +++R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMADRIVFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D ++   E ++RG+F+E  N +     F ++ +++A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 MSSDQVMAKTEEMVRGLFQELLNVDLGE--FPKMTFEEAMRRFGSDKPDLRNPLELIDVA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DIVKEVEFAVFNGPANDPEGRVAVLSIPGGAKLSRKQLDEYAKYVTIYGAKGLAWMKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G      PV K L+    +A+  R   Q GD   F A             R    ++
Sbjct: 359 LDKGMEGIQSPVLKFLSEDVVKALLERTGAQTGDLILFGADKANIVAESMGALRLKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    ++  W++DFP +E   +   +   H+PFT P          + ++  +  YD
Sbjct: 419 FDLLQ-GEWKPLWVVDFPMFERTSD-GGLHAMHHPFTAPSNMTPEELEANPIAAISDAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H S++    F  +GI+ E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVLNGCELGGGSVRIHDSKMQSAVFRILGINDEEATEKFGFLLEALRYGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DRI+ML+ GA ++R+V  FP +      L  +P   +  QL ELG+ +VE   K
Sbjct: 537 DRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLAELGVSVVEAETK 590


>gi|30063276|ref|NP_837447.1| aspartyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|30041528|gb|AAP17256.1| aspartate tRNA synthetase [Shigella flexneri 2a str. 2457T]
          Length = 590

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 220/593 (37%), Positives = 327/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN    EAI  R   QDGD  FF A +              + ++
Sbjct: 357 RAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + +   W++DFP    ++ E  +   H+PFT P+    +       +  A  YD
Sbjct: 417 LGLTDESKWAPLWVIDFPMLG-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 588


>gi|221068933|ref|ZP_03545038.1| aspartyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220713956|gb|EED69324.1| aspartyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 601

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 219/596 (36%), Positives = 332/596 (55%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+  CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD    F++A+
Sbjct: 4   RSQYCGLVTEAQMGETVTLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRAEMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + G+V +R A T N  + +GQIE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  DVRNEFCVQVKGVVRARPAGTTNDKLKSGQIEVLCHELNVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N++ R +    +R  +  E FI+  TP+L  S+PEGARD+LVP
Sbjct: 123 VRLTNRVMDLRRPVMQRNMMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGEFFALPQSPQLYKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    + +++ VF+   N +     F  + Y DA  R+G+DKPDLR  +    +T
Sbjct: 242 LNEEEIRAIFQRMIKEVFQTQLNVDLGE--FPIMTYQDAAFRFGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G  V      G   +R   D   E+ +  G  GLA+I    
Sbjct: 300 DIMGDVDFKVFSTPATTKGGRVVALRVPGGAAISRGEIDGYTEFVKIYGAKGLAWIKVNE 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+L+      I  R   QDGD  FF A             R  +   
Sbjct: 360 VAKGREGLQSPIVKNLHDAALTEILKRTGAQDGDLIFFGADKEKIVNDSIGALRLKVGHS 419

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              ++ G+   + +   W++DFP +E +EE  +    H+PFT P+ G E L   D     
Sbjct: 420 EFGKKSGLF-EDKWAPLWVVDFPMFEHDEESGRWVAVHHPFTSPKDGHEDLMDTDPGKCI 478

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R H ++V  + F  + I+ E    +FG L  A Q G PPHGG
Sbjct: 479 AKAYDMVLNGWELGGGSVRIHRADVQAKVFEALNITPEQQRAKFGYLLDALQYGAPPHGG 538

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR++ L+ G+ ++R+V  FP +Q   DLL  +PS V  +QLREL +++   
Sbjct: 539 LAFGLDRLITLMTGSDSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIKLRNP 594


>gi|256964757|ref|ZP_05568928.1| aspartyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|307272838|ref|ZP_07554085.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|256955253|gb|EEU71885.1| aspartyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|306510452|gb|EFM79475.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0855]
          Length = 589

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 226/591 (38%), Positives = 331/591 (56%), Gaps = 10/591 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
            RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+     +EI
Sbjct: 3   KRTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A   RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    
Sbjct: 63  ADKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVN 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+L
Sbjct: 123 DELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR   EF Q+D+E 
Sbjct: 183 VPSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQL-EFTQIDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F+  ++I    EN+L  V +E       S  F R+ YD+A+ RYG+DKPD R  + + +
Sbjct: 242 TFLTPEEIQTYTENMLAEVMKETKGIEI-SVPFPRMSYDEAMARYGSDKPDTRFAMELID 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V E     +F+VF   L      +           +R   D + ++    G  GLA++  
Sbjct: 301 VAEVVKDVDFKVFQAALENGGHVKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWLKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK L    ++ +    + + GD   F A  P    +     R  + 
Sbjct: 361 EED-----GLKGPIAKFLT-EVSDELIAATNAEVGDILMFGADKPEIVAAALGAVRTRLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+         D  S+ A  
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVDRLATDPASVYAEA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA 
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIAL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 535 GLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|212711940|ref|ZP_03320068.1| hypothetical protein PROVALCAL_03015 [Providencia alcalifaciens DSM
           30120]
 gi|212685462|gb|EEB44990.1| hypothetical protein PROVALCAL_03015 [Providencia alcalifaciens DSM
           30120]
          Length = 589

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 219/594 (36%), Positives = 329/594 (55%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT+ CG L ++  G  V L GWV+R R  GG+IF+D+RD  GI QV  +P+    FE A 
Sbjct: 2   RTNYCGQLNIAHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPERKDIFEKAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R     N ++ TG+IE+ A+ +++ + +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQKNKDMATGEIEIFAEGLDVFNKSEP--LPLDSNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 RRLKYRYLDLRRPEMSDRLRTRAKITSFVRNFMDKEGFMDVETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++R ++ +    +    +F  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREVMERMIRNLWIDVKGVD--LGDFPIMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DIVKDVEFAVFAGPANDPKGRVAALKVPGGAVMTRKQIDEYGNFVGIYGAKGLAWMKINE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L++   E I  R    DGD   F AG            R  + ++
Sbjct: 357 RAKGLEGIQSPVAKFLSLEIIEQIIERTGAADGDIILFGAGAKNVVTDSMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             + + N ++  W++DFP +E N  E  +   H+PFT P+         +     A  YD
Sbjct: 417 FELTDLNSWQPLWVIDFPMFEEN-GEGGLTAMHHPFTSPKDFTPEDLARNPEDAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H SE+    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRSEMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+VMLL G  N+R+V  FP +     L+  +PS  + + L EL + +V   ++
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTNAPSHANPDSLAELAIAVVAKEEE 589


>gi|325568593|ref|ZP_08144886.1| aspartate--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325157631|gb|EGC69787.1| aspartate--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 591

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 232/595 (38%), Positives = 336/595 (56%), Gaps = 10/595 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG +  + +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+     +EI
Sbjct: 3   KRTVYCGLVNETHLNQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEVSKEAWEI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A   RSE+VL + G V++R+ E IN  ++TG  E+   +I IL+ A+     +  ++   
Sbjct: 63  ADKCRSEYVLEVTGQVINRAPEAINPKMVTGAYEVMISEITILNTAKTPAFLIEDDQTVG 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR  +  NIV R +   ++R  +   +F++  TP L  S+PEGARD+L
Sbjct: 123 DEIRMKYRYLDLRRPKMTNNIVMRAKTTQAIRNFLDTNDFLDIETPYLGKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRIYPGHFYALPQSPQIFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+  ++I    E +L  V  E      V+  F R+ YD+A+ RYG+DKPD R  + + +
Sbjct: 242 SFLTAEEIQTYTEELLAKVMREVKGIE-VTLPFPRMTYDEAMGRYGSDKPDTRFDMELID 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E     +F+VF   L      +V          +R   D +  +A   G  GLA++  
Sbjct: 301 LSEVVKDVDFKVFQMALEKGAVVKVLNAKGAADKYSRKDMDNLGHYAGQFGAKGLAWVKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK L    T+AI    + + GD   F A       +     RN + 
Sbjct: 361 EED-----GLKGPIAKFLTEA-TDAIIAAANAEVGDILMFGADSFEIVSATLGAIRNKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +ELG+I+ + F F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A  
Sbjct: 415 KELGLIDESKFNFLWVTDWPQFEYDEEAGRYVSAHHPFTLPKESDLPLLTTDPSKVYAQA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  EV  Q F  +G S   ++N+FG L  A   G PPHGGIA 
Sbjct: 475 YDIVLNGYELGGGSLRIHTREVQEQMFEALGFSCREMQNQFGFLLDALDYGFPPHGGIAL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VMLL G +N+REV  FP +    D +  +PSTVS  QL +L + +    +
Sbjct: 535 GLDRLVMLLAGEENIREVIAFPKNGKAADPMSQAPSTVSPMQLFDLSIDVTTVEE 589


>gi|89075783|ref|ZP_01162171.1| aspartyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89048515|gb|EAR54090.1| aspartyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 596

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 214/593 (36%), Positives = 329/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD +  F +A 
Sbjct: 2   RTHYCGHLNKSLAGQTVDLCGWVNRRRDLGGLIFIDMRDREGVVQVVIDPDMTEIFTLAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V  R     N ++ TG++E+ A  +EI++ +E   LP+   ++  E 
Sbjct: 62  QLRNEFCIRLTGEVRERPESQCNKDMATGEVEVYATGLEIINRSE--ALPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNAFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G+FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGNFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++    E ++  +++E  N +     F  + +++A RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEEVRAVTEKMITEMWKELLNVD--LGTFPIMSFEEAARRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DIVKDVDFKVFSGPANDEKGRVAVIRVPGGAELSRKQIDEYTKFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN      +  R   + GD   F A +           R  + ++
Sbjct: 357 RAAGFEGVQSPVAKFLNEEVVANLLERTQAESGDIILFGADNKRVVTEAMGALRLKLGED 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + ++  W++DFP +E NE+   +   H+PFT P          +  +  +  YD
Sbjct: 417 LDLTDKSAWKPLWVVDFPMFEENED-GSLSAMHHPFTSPLNLTPEELAANPAAALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H S++    F  +GIS +    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNSDMQSTVFDILGISADEQRLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G  N+R+V  FP +     LL  +PS  +   L EL + +    K
Sbjct: 536 DRLVMLLCGTDNIRDVIAFPKTTAAACLLTDAPSLANPAALEELSIAVKIAKK 588


>gi|50083844|ref|YP_045354.1| aspartyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|49529820|emb|CAG67532.1| aspartyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 612

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 236/595 (39%), Positives = 338/595 (56%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 23  RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 82

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPE 122
            VRSE+VL I G V  R   T N+N+++GQIE+  ++IE+L+ +E  P P         E
Sbjct: 83  KVRSEFVLKITGRVRRRYEGTENSNMVSGQIEVLGKEIEVLAQSETPPFPLNDDNINISE 142

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLD+RR  +   +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 143 EHRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 202

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 203 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 261

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E          F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 262 FLNDDDIMDLMEGMTVKLFDELLGIKFDK--FQRMPYSEAMRDYASDKPDLRIPLKLVDV 319

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+       G          G   R+  D   ++    G  GLAYI   
Sbjct: 320 ADLMQDVEFKVFAGPAKDPKGRIAALRVPGAGALPRSAIDEYTKFVGIYGAKGLAYIKVN 379

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G      P+ K +  +  + +  R+  ++GD  FF A             R  I  
Sbjct: 380 EIEKGVEGLQSPIVKFIEPIVMQ-LLERVGAENGDIVFFGADKAKVVNDAMGALRVKIGH 438

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L ++ C  +   W++DFP +E  ++  K    H+PFT+P+  +E +K N      +  Y
Sbjct: 439 DLKLVTCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTLPKSSVEDVKAN-PGEALSVAY 495

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG+A G
Sbjct: 496 DMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGGLAFG 555

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR++ML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PKK
Sbjct: 556 LDRLIMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQPKK 610


>gi|171464173|ref|YP_001798286.1| aspartyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193711|gb|ACB44672.1| aspartyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 600

 Score =  624 bits (1608), Expect = e-176,   Method: Composition-based stats.
 Identities = 225/595 (37%), Positives = 331/595 (55%), Gaps = 10/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H+CG +  S +G  V L+GW++R R HGG+IF+D+RD  G  QVV +PD    F +A+
Sbjct: 4   RSHTCGQVTDSLIGQEVTLAGWINRRRDHGGVIFIDLRDREGFVQVVCDPDRPEMFALAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+ + I GLV +R   T N ++++G++E+    + IL+ +   P  +  E    E+
Sbjct: 64  QVRSEFCIQIKGLVRARPTGTANVDLVSGKVEILCHSLVILNASVTPPFQIDDESLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + KN+  R  +    R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRILDLRRPQMQKNLRLRYNVAMECRRYLDDAGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D E +F
Sbjct: 183 SRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETAF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  EN++R +F++  N   + N F  + Y + + R+G+DKPDLR       +T
Sbjct: 242 LSELEIRDLFENMIRHIFKKTINVE-LPNPFPTMPYSEGMARFGSDKPDLRVNFEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G  V      G   +R+  D   ++    G  GLA+I    
Sbjct: 301 DLMKDVDFKVFSGAANQVGGRVVGLCVPGGAEISRSEIDDYTQFVSIYGAKGLAWIKVNS 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+L+    E I  R   +DGD  FF A           + R  I   
Sbjct: 361 VAEGRNGLQSPIVKNLHDAAIEGILKRTGAKDGDIIFFGADKEKVVNDAIGNLRLRIGQS 420

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +E G+     ++  W++DFP ++++E E +    H+PFT P+         D     
Sbjct: 421 AWGKEHGLFTEG-WKPLWVVDFPMFDYDEGEARWVACHHPFTSPKDEHMQYLETDPGKCL 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG EI  G +R H   V  Q F  + I  E  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGSEIGGGSVRIHQEAVQSQVFRALKIDAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           IA G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V   QLREL +R+ +
Sbjct: 540 IAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQ 594


>gi|149197385|ref|ZP_01874436.1| aspartyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149139403|gb|EDM27805.1| aspartyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 596

 Score =  623 bits (1607), Expect = e-176,   Method: Composition-based stats.
 Identities = 295/601 (49%), Positives = 407/601 (67%), Gaps = 7/601 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+HSC DL   D G   RLSGW+HRVR  GGI+F+D+RDHYGITQVV NP      
Sbjct: 1   MHTYRSHSCNDLRKDDAGQGARLSGWIHRVRDMGGIVFIDLRDHYGITQVVINPQEDFHM 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                + E V+ + G V+ R  ET N+ I TG++EL A+++++ S+ E +P  V  E E 
Sbjct: 61  DVHHWKLESVITVTGDVVLRDEETFNSKIPTGEVELIAKELKMESLVEHMPFNVALEMEM 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE++R ++R+LDLR   +H NI+ R +II S+R RM    F E  TPILTASSPEGARDF
Sbjct: 121 PEAMRLEHRYLDLRTSRMHHNIITRAKIIASLRQRMTGLGFNEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 181 LVPSRLNPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF  QDD+   +E V+ G F+EF+   T    F+RI Y +++ +YG+DKPDLRNPII+ 
Sbjct: 241 MSFATQDDVFKVIEEVIIGTFQEFTPWTTDEKEFVRIPYKESMLKYGSDKPDLRNPIIIS 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +++  FV SEF  F+ ++          +    G  +R F D+M  +A+S G  GL Y+ 
Sbjct: 301 DISPAFVDSEFTAFASVVKKGGVVRAMKVSNHAGA-SRKFHDKMITFAQSVGSKGLGYLI 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E+G +    P+AK L+     +I+   D+QDGD  +F+A      C   A  R+ +
Sbjct: 360 F---ENGEL--RSPIAKFLSEETINSIKEACDVQDGDVVYFVADKEKNACRICAAVRDEL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            Q L +++   F+FCWI+D+P +E+N+E KK++F+HNPF+MPQG ME+L+  D L + A+
Sbjct: 415 GQRLNLLDEKEFKFCWIVDYPMFEYNDETKKVEFSHNPFSMPQGEMEALETMDPLDVLAW 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYDLVCNG E++SG +RNH  ++ML+AF   G + E VE+ F G+  AF+ G PPH GIA
Sbjct: 475 QYDLVCNGIELSSGAVRNHRPDIMLKAFGIAGYAAEEVESSFSGMINAFRHGAPPHAGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKKIL 599
            G+DR+VML+LG  ++RE+  FP++ +  DLLM +PS VS +QL+EL L++ +  PK  +
Sbjct: 535 PGVDRMVMLILGEPSIREIIAFPLNGSAQDLLMNAPSPVSQDQLKELHLKLNLPKPKPKM 594

Query: 600 K 600
           +
Sbjct: 595 Q 595


>gi|261343867|ref|ZP_05971512.1| aspartate--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282568254|gb|EFB73789.1| aspartate--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 589

 Score =  623 bits (1607), Expect = e-176,   Method: Composition-based stats.
 Identities = 220/594 (37%), Positives = 328/594 (55%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT+ CG L ++  G  V L GWV+R R  GG+IF+D+RD  GI QV  +P+    FE A 
Sbjct: 2   RTNYCGQLNIAHEGQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPERKDIFEKAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R     N ++ TG+IE+ A+ + + + +E   LP+   +   E 
Sbjct: 62  ELRNEFCIQITGTVRARPDSQKNKDMATGEIEVFAEDLFVFNKSEP--LPLDSNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVP
Sbjct: 120 RRLKYRYLDLRRPDMSERLRTRAKITSFVRNFMDNEGFLDVETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGVDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME ++R ++ E    +    NF  + + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MSAEQVREVMERMIRNLWLEVKGVD--LGNFPIMTFAEAMRRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DIVKNVEFAVFSGPANDPKGRVAALKVPGGAAMTRKQIDEYGSFVGIYGAKGLAWMKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L++   E +  R    DGD   F AG            R  + ++
Sbjct: 357 RAKGLEGIQSPVAKFLSLDVIEQLLERTGAVDGDIILFGAGAKNVVTDSMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             + N N ++  W++DFP +E N  E  +   H+PFT P+         +     A  YD
Sbjct: 417 FELTNLNSWQPLWVIDFPMFEEN-GEGGLTAMHHPFTSPKDLSPEDLAKNPEDAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRGEMQQTVFGILGITEEEQREKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+VMLL G  N+R+V  FP +     L+  +PS  + + L EL + +V   ++
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTNAPSHANPDSLTELAIAVVAKEEE 589


>gi|255320947|ref|ZP_05362121.1| aspartyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|255302116|gb|EET81359.1| aspartyl-tRNA synthetase [Acinetobacter radioresistens SK82]
          Length = 592

 Score =  623 bits (1607), Expect = e-176,   Method: Composition-based stats.
 Identities = 241/597 (40%), Positives = 343/597 (57%), Gaps = 9/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYPE 122
             RSE+VL I G V  R A T NAN+I+GQIE+  ++IE+L+ +E  P P+  E     E
Sbjct: 63  KARSEYVLKITGRVRRRYAGTENANMISGQIEVLGKEIEVLAQSETPPFPLNDENTNISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLD+RR  +   +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDENGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E          F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FMSDDDIMDLMEGMTVKMFDELLGIKFDK--FQRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+       G  V       G   R+  D   ++    G  GLAYI   
Sbjct: 300 ADLMQDVEFKVFAGPAKDPKGRIVALRVPGAGSLPRSAIDEYTKFVGIYGAKGLAYIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G      P+ K +  +  + ++ R+  ++GD  FF A             R  I  
Sbjct: 360 ELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFFGADKAKVVNDAMGALRVKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +  C  +   W++DFP +E  ++  K    H+PFT+P+  +E +K N      +  Y
Sbjct: 419 DLNLATCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTLPKSSVEEVKNN-PGEALSVAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG EI  G +R +  E+    F  +GI++E  E +F  L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTEIGGGSLRIYTLEMQKAIFEALGINEEEAEEKFSFLLNALRYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           +DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E  KK  
Sbjct: 536 LDRLVMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQQKKEA 592


>gi|298529647|ref|ZP_07017050.1| aspartyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511083|gb|EFI34986.1| aspartyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 603

 Score =  623 bits (1607), Expect = e-176,   Method: Composition-based stats.
 Identities = 236/595 (39%), Positives = 344/595 (57%), Gaps = 14/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H C DL +      V L GWV   R HGG+IF+D+RD  G+TQVV  PD  +   E A
Sbjct: 18  RSHGCNDLTLEHDDREVCLMGWVQYRRDHGGLIFIDLRDRDGLTQVVFTPDVSAQALEDA 77

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++RSE+VL + G+V  R  + IN N+ TG IE++ ++ ++L+ +   P  +    E  E
Sbjct: 78  HALRSEYVLAVKGVVRRRPEDMINPNLYTGDIEVAVREFKLLNRSRTPPFLIEDRAEAAE 137

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R K+R+LDLRR  +  N+  R+++++ +R  + +  F E  TP+LT S+PEGARDFLV
Sbjct: 138 NLRLKHRYLDLRRPAVAGNLRLRSQVVHEIRNFLHSSGFTEVETPVLTRSTPEGARDFLV 197

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++QG FYALPQ+PQ +KQLLM +G DRY+Q+  CFRDED R+DR P EF Q+DMEMS
Sbjct: 198 PSRLSQGHFYALPQSPQLFKQLLMCAGMDRYYQVVKCFRDEDLRADRQP-EFTQVDMEMS 256

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE++ +++  EN++  +F+E  +   +   F R+ Y  AI  YG D+PD+R  + + +V
Sbjct: 257 FVEEEGVMSESENMIARLFKEVLDVE-LETPFQRLDYSRAIADYGLDRPDVRFDLTLKDV 315

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+    S F +F++   V            G   +R   D   ++    G  GLA+I  +
Sbjct: 316 TDVVRGSGFNLFARAELVK-----ALRVPGGAELSRREIDEYTDFVGIYGAKGLAWIKIK 370

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            DE        P+AK L+      +   L ++ GD  FF A  P    +     R  + +
Sbjct: 371 EDE-----WQSPIAKFLSREECSGLTEALGLEAGDIVFFQAASPEVVNNSLGYLRLKLGE 425

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
             G+I  + F   WIMDFP  EW+ EEK+    H+PFT P+ G   L   +     A  Y
Sbjct: 426 RFGLIPRDTFAPIWIMDFPLLEWDGEEKRWMARHHPFTSPKDGHMDLLEKEPGQALARAY 485

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E   + F  +G+  E   N+FG L +A   G PPHGGIA G
Sbjct: 486 DMVINGQEVGGGSIRLHTREDQERMFKALGMDLEESRNKFGFLLQALDYGAPPHGGIAFG 545

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VML+ G  ++R+V  FP +Q    L+  +P+ VS  QLRELG+R+ E  KK
Sbjct: 546 LDRLVMLMAGCSSIRDVIAFPKTQKASCLMTEAPAAVSNRQLRELGIRLREAEKK 600


>gi|238022339|ref|ZP_04602765.1| hypothetical protein GCWU000324_02246 [Kingella oralis ATCC 51147]
 gi|237866953|gb|EEP67995.1| hypothetical protein GCWU000324_02246 [Kingella oralis ATCC 51147]
          Length = 602

 Score =  623 bits (1607), Expect = e-176,   Method: Composition-based stats.
 Identities = 228/605 (37%), Positives = 352/605 (58%), Gaps = 12/605 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +  + +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F +A 
Sbjct: 2   RTNYCGLINEAYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           + R+E+VL I G V +R   T N  +++G+IE+ A++IEIL+ A   P  +  +    E+
Sbjct: 62  TARNEFVLSITGRVRNRPEGTTNDKMVSGKIEILAKEIEILNPAATPPF-MIDDENISET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R + R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLQNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHAGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I++  E +++ +F +  N +    +F R+ Y +A+ +YG+DKPD+R  +    +T
Sbjct: 240 LNENEIMDITEGMVKQIFHDTMNVD--LGDFPRMLYSEAMFKYGSDKPDMRVSLAFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 298 DVMKTEEFKVFRAAADMPNGRVVALRVPNGAKLSRKDIDEYTKFVGIYGAKGLAYIKVND 357

Query: 364 DES----GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +     +     P+ K L+    + I  R   Q+GD  FF A             R  
Sbjct: 358 VNNLSNGEDSGLQSPIVKFLSEGCLKTIIERTGAQNGDLIFFGADKAKVVNEAIGALRIK 417

Query: 420 IAQELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           +  E G  +    + ++  W++DFP +E++EEE +    H+PFT P+ G E L      +
Sbjct: 418 VGHEHGAADGYFVDEWKPLWVVDFPMFEYDEEENRYTAMHHPFTSPKAGHEDLMETQPEN 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G IR H +EV  + F+ + I+ E  +N+FG L    + G PPH
Sbjct: 478 CLARAYDMVLNGWEIGGGSIRIHRAEVQEKVFAALKITPEEQQNKFGFLLDNLKFGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V L+ GA+++R+V  FP +Q   DLL+ +P++V  +QLREL LR+     
Sbjct: 538 GGLAFGLDRLVTLMAGAESIRDVIAFPKTQRAQDLLVDAPNSVDEKQLRELSLRLRVKAA 597

Query: 597 KILKI 601
           +  + 
Sbjct: 598 ESKEA 602


>gi|254468835|ref|ZP_05082241.1| aspartyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087645|gb|EDZ64928.1| aspartyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 595

 Score =  623 bits (1607), Expect = e-176,   Method: Composition-based stats.
 Identities = 245/592 (41%), Positives = 351/592 (59%), Gaps = 5/592 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +  S +   + L GW HR R HGG+IF+D+RD  G+ Q+V +PD+   F+IA+
Sbjct: 2   RTLYCGHVNASHIDQEIYLCGWAHRRRDHGGVIFIDLRDREGLAQIVIDPDTPEAFKIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +VRSE+VL +   V  R   T+N NI TG++E+   +IEI++ +   P  V  +    E+
Sbjct: 62  TVRSEFVLKVKCKVRKRPEGTVNKNIPTGEVEMLVSEIEIINASLTPPF-VIDDENITET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR + RF+DLRRD + KN+  R  I  S+R  +  +NFIE  TPILT S+PEGARD+LVP
Sbjct: 121 IRLENRFIDLRRDQMQKNLKVRYEITKSVRQSLDEDNFIEIETPILTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHHGEFFALPQSPQLFKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIEASF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE++D+ N    + + VF++  N +     F  I Y +A+ RYG+DKPDLR  + +  +T
Sbjct: 240 VEEEDVKNIAAKLTQKVFKDVLNVDLPEK-FQEITYKEAMTRYGSDKPDLRVNLELIELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR- 362
           E     +F+VFS   +   G         G   +R+  D+  E+ R  G  GLAYI    
Sbjct: 299 EDMKDVDFKVFSTPANSTSGRVAALKIPSGADMSRSEIDQYTEFVRIYGAKGLAYIKIND 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + +        P+ K+++    +AI  +   ++GD  FF A             R  I  
Sbjct: 359 VTKLNEEGLQSPIVKNIHEKALKAIIEKTQAENGDLIFFGADKEKIVNEALGALREKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +  I++ + +   W++DFP +E+NE+E + D  H+PFT P+ G E L  +D  +  +  Y
Sbjct: 419 DRKILSGDEWSILWVVDFPMFEFNEDEDRWDALHHPFTSPKDGHEKLLSSDPGACLSKAY 478

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G IR H   V  Q FS + IS E    +FG L  A Q G PPHGG+A G
Sbjct: 479 DLVINGWEVGGGSIRIHDQSVQSQVFSALNISNEEANEKFGFLLEALQYGAPPHGGLAFG 538

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+  LL+GA+++R+V  FP +Q    LL  +P+ V  +QLREL +R+   
Sbjct: 539 LDRLTTLLVGAESIRDVIAFPKTQRAQCLLTSAPNEVDEKQLRELHIRVRNQ 590


>gi|254824422|ref|ZP_05229423.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|255521238|ref|ZP_05388475.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|293593657|gb|EFG01418.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|328474880|gb|EGF45680.1| aspartyl-tRNA synthetase [Listeria monocytogenes 220]
 gi|332311961|gb|EGJ25056.1| Aspartyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 591

 Score =  623 bits (1607), Expect = e-176,   Method: Composition-based stats.
 Identities = 228/597 (38%), Positives = 335/597 (56%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +    
Sbjct: 60  LEIADSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNTSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +++I    E++L  V +E  N       F R+ Y +A+ R+G+DKPD+R  + 
Sbjct: 239 LETSFLTKEEIQAITEDMLVDVVKEAKNITI-DKPFPRMTYKEAMDRFGSDKPDIRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + NV++     +F+VF   +      +     A     +R   D +  +  + G  GLA+
Sbjct: 298 LQNVSDVVKDVDFKVFQSAIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E+G +   GP+AK         ++  L  +DGD   F A       +     RN
Sbjct: 358 LKV---EAGELK--GPIAKFFPEEKATELKASLQAEDGDLLLFAADKADIVAASLGALRN 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + 
Sbjct: 413 KLGKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVM 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGG
Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 533 IALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKKE 589


>gi|145628668|ref|ZP_01784468.1| aspartyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145638770|ref|ZP_01794379.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|144979138|gb|EDJ88824.1| aspartyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145272365|gb|EDK12273.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309750260|gb|ADO80244.1| Aspartyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 588

 Score =  623 bits (1607), Expect = e-176,   Method: Composition-based stats.
 Identities = 217/592 (36%), Positives = 332/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++  ++ +    +     F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHDLWLDTIGVD--LGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVEFKVFNEPANNPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R++ Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFSPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+  
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVKAE 588


>gi|113866482|ref|YP_724971.1| aspartyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|123134433|sp|Q0KEG8|SYD_RALEH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|113525258|emb|CAJ91603.1| Aspartyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 602

 Score =  623 bits (1607), Expect = e-176,   Method: Composition-based stats.
 Identities = 224/602 (37%), Positives = 336/602 (55%), Gaps = 8/602 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CF 59
           M   RTH CG +     G  V L+GWV R R HGG+IF+D+RD  G+ QVV +PD    F
Sbjct: 1   MSSMRTHYCGLVTEQFSGQEVALTGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A+ +R+E+ + + G V  R A T NAN+ +G+IE+   ++ +L+ +   P  +  +  
Sbjct: 61  KAAEEIRNEFCIRVTGKVRPRPAGTENANLTSGKIEVLCHELTVLNPSVTPPFQLDDDNL 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+ R  +R LDLRR  +  N+  R ++   +R  + A+ FI+  TP+L  S+PEGARD
Sbjct: 121 S-ETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKFLDAQGFIDIETPMLGKSTPEGARD 179

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D 
Sbjct: 180 YLVPSRVNPGHFFALPQSPQIFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDC 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E+++R VF+   + + +   F  + + +A+ R+G+DKPDLR  +  
Sbjct: 239 ETSFLTEQEIRDLFEDMMRTVFKNAIDVD-LDARFPVMEFREAMARFGSDKPDLRVKLEF 297

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +TE     +F+VFS   + + G  V      GG  +R   D   ++    G  GLA+I
Sbjct: 298 TELTEVMKDVDFKVFSSPANSDNGRVVGLRVPGGGAISRGEIDAYTQFVGIYGAKGLAWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G      P+ K+L+      I  R   QDGD  FF A             R  
Sbjct: 358 KVNEVAKGRDGLQSPIVKNLHDAAIAEILKRTGAQDGDIIFFGADKAKVVNDSIGALRLK 417

Query: 420 IAQ-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           I   + G  N    + ++  W++DFP +E++EE+ +    H+PFT P+         D  
Sbjct: 418 IGHSDFGKANGLFEDTWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPG 477

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              A  YD+V NG+E+  G +R   S++  + F  + I+ +    +FG L  A Q G PP
Sbjct: 478 KCLAKAYDMVLNGWEMGGGSVRIFRSDIQSKVFRALNINDDEARAKFGYLLDALQYGAPP 537

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGG+A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS+V  +QLREL +R+    
Sbjct: 538 HGGLAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSSVDEKQLRELHIRLRATE 597

Query: 596 KK 597
            K
Sbjct: 598 PK 599


>gi|319426437|gb|ADV54511.1| aspartyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 592

 Score =  623 bits (1607), Expect = e-176,   Method: Composition-based stats.
 Identities = 216/594 (36%), Positives = 331/594 (55%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S VG  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    F +A 
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFAVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G+V +R    +N  + TG+IE+  + + I++ A+ LPL +   +   E 
Sbjct: 62  TLRAEFCVQVKGVVRARPDSQVNGQMKTGEIEVLGKALTIINAADPLPLSLDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +++R  + +  F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAQRLMFRAKVTSTVRRFLDSNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F E  N +     F R+ Y++A+RR+G+DKPDLRNP+ + ++ 
Sbjct: 241 MTSEQVMAKTEEMMRGLFLEMLNVDLGE--FPRMTYNEAMRRFGSDKPDLRNPLELVDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DLLKEVEFAVFSAPANDEEGRVAVLRIPGGAALSRKQIDDYTKFVGIYGAKGLAWMKIND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PV K LN      I  R   Q GD   F A             R    ++
Sbjct: 359 LSLGLEGIQSPVLKFLNESIVNEIISRTGAQTGDIILFGADQATVVAESMGALRLKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    +   W++DFP +E           H+PFT P+G   +    +  +  +  YD
Sbjct: 419 FSLLQ-GEWRPLWVVDFPMFEKI--NGNFHAVHHPFTAPRGVTAAELEANPANRVSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  E+    F  +GI+ +  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGCELGGGSVRIHNQEMQSAVFRILGITDDEAKEKFGFLLEALRYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DRI+ML+ GA ++R+V  FP +      L  +P   + +QL ELG+ +VE   K
Sbjct: 536 DRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVEKAVK 589


>gi|303253275|ref|ZP_07339424.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307248172|ref|ZP_07530200.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|302647957|gb|EFL78164.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306855349|gb|EFM87524.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
          Length = 591

 Score =  623 bits (1607), Expect = e-176,   Method: Composition-based stats.
 Identities = 219/593 (36%), Positives = 337/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S VG  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+IA 
Sbjct: 3   RSHYCGALNRSHVGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKIAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE  + I G V++R    IN  + TG+IE+  + + + + +E   LP+   +   E 
Sbjct: 63  SLRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNVVVYNNSE--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHNGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   MEN++ G++ +  N +     F  + + +A++R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAEEVRELMENMIHGLWLDRLNVD--LGKFPIMTWQEAMQRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DILKDVEFKVFNEPANSVDGRVTVLRVPNGASLTRKQIDEYTQFVGIYGAKGLAWAKINN 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN    +A+  R +   GD  FF A             R  + ++
Sbjct: 358 VNAGMEGIQSPVAKFLNEEVFKALIERTNATSGDILFFGADKWQVVTDSMGALRLKVGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + ++  W++DFP +E + +E  +   H+PFT P+         + ++  A  YD
Sbjct: 418 LALTDLSAWKPLWVIDFPMFEKD-DEGNLSAMHHPFTSPKNLTPEELAANPVNAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R +  ++    F  +GI+++  + +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIYDPKMQQTVFGILGINEQDQQEKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L ELG+ I++  K
Sbjct: 537 DRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELGIAILKKEK 589


>gi|107023660|ref|YP_621987.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116690745|ref|YP_836368.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|123244665|sp|Q1BTP1|SYD_BURCA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225325|sp|A0KAE8|SYD_BURCH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|105893849|gb|ABF77014.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116648834|gb|ABK09475.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 600

 Score =  623 bits (1607), Expect = e-176,   Method: Composition-based stats.
 Identities = 227/598 (37%), Positives = 333/598 (55%), Gaps = 10/598 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + I GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQIKGLVRNRPDGTVNAGLKSGRIEVLCHELNVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +   +   F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVE-LDAKFPVMPYSEAMARFGSDKPDLRVQLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KGG  +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGGELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+L+  +  AI  R   +DGD  FF A             R  I   
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +  G++    ++  W++DFP +E+++E+ +   AH+PFT P+         D     
Sbjct: 421 EFGKANGLVQAG-WKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCL 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+ +  +
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|326201904|ref|ZP_08191774.1| aspartyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325987699|gb|EGD48525.1| aspartyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 593

 Score =  623 bits (1607), Expect = e-176,   Method: Composition-based stats.
 Identities = 230/593 (38%), Positives = 346/593 (58%), Gaps = 10/593 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACFEIA 62
            R+H C +L  S++G  V + GWV + R  G ++F+D+RD  GI Q+V  + D   F+ A
Sbjct: 9   KRSHKCTELSSSNIGEKVTVMGWVQKQRNLGSLVFIDLRDRTGIVQLVFTDKDGEMFDKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K++RSE+V+   G V +RS E +N  + TG+IE+ A ++ +LS +E  P+ +    E  E
Sbjct: 69  KTIRSEFVIATVGTVAARSPEAVNKKMATGEIEIIASELRVLSTSETPPMYIEENSEVNE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLDLRR  + +N++ R R+    R       F+E  TPIL  S+PEGARD+LV
Sbjct: 129 QTRLKYRFLDLRRPDMQRNLILRHRVAKVARDYYDENAFLEIETPILIKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G F+ALPQ+PQ YKQ+LM SG+DRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 189 PSRVHPGKFFALPQSPQLYKQILMVSGYDRYFQIAKCFRDEDLRADRQP-EFTQIDIEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV  DD+L   E  ++  F+E  N + V   FLR+ Y +A+ R+G+DKPD+R  + + N+
Sbjct: 248 FVNVDDVLEVNEGFVKKAFKEALNID-VETPFLRMPYAEAMERFGSDKPDIRFGMELINM 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++   +  F+VF+  +++       AI AKG    +R   D + E  ++    G+A+I  
Sbjct: 307 SDMVANCGFKVFTDAVAMGGSVR--AINAKGCAKFSRKEIDALVEVVKTYKAKGMAWISI 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
               S         AK ++    ++I  R   + GD   F+A             R  IA
Sbjct: 365 ----SPENEIKSSFAKFMSEDEMKSILDRAQAEPGDLICFVADKNNVVFDALGQLRLEIA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L I+N + F+F W+ +FP +E++E+E++    H+PFT P          D   ++A  
Sbjct: 421 RKLDILNPDEFKFLWVTEFPLFEYDEDEQRWAAKHHPFTSPMDEDLEYLDTDPGRVRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H+ E+  + F  +G S+E    +FG L  AF+ G PPHGG+A 
Sbjct: 481 YDMVLNGVELGGGSIRIHIQELQAKMFKMLGFSEEDANRKFGFLLEAFKYGTPPHGGMAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR+VML+    ++R+V  FP  QN   L+  +P  V  +Q+ EL + I + 
Sbjct: 541 GLDRLVMLMAKKNSIRDVIAFPKVQNASCLMSNAPDVVDEKQIEELHINISKE 593


>gi|332975401|gb|EGK12295.1| aspartate--tRNA ligase [Desmospora sp. 8437]
          Length = 594

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 240/594 (40%), Positives = 344/594 (57%), Gaps = 10/594 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           ++ H CG L    VGS V L+GWV + R  GG+IFLD+RD  G  QVV NP+      EI
Sbjct: 5   FKNHDCGLLTKEHVGSTVILNGWVRKWRNLGGLIFLDLRDRSGTVQVVINPEVSPQAAEI 64

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  VRSE+VL + G V++RS ETIN  + TG+IE+ A+++E+L+ ++  P  V  + E  
Sbjct: 65  ADKVRSEYVLAVQGEVVARSEETINPRMQTGEIEVLAREVEVLNASKTPPFTVADDTEVE 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R KYR+LDLRR  + + ++ R R +  +R  +    FIE  TP+LT SSPEGARD+L
Sbjct: 125 ETTRLKYRYLDLRRPVMQETLLLRHRAMQMVRRFLDEHGFIEVETPMLTKSSPEGARDYL 184

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ +KQLLM SG +RYFQI  CFRDED R+DR P EF Q+D+E 
Sbjct: 185 VPSRVHEGEFYALPQSPQIFKQLLMVSGMERYFQIVRCFRDEDLRADRQP-EFTQIDIEA 243

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+E D+++  ME ++  +F E      V   F RI Y +A+ R+G+D+PDLR  + + +
Sbjct: 244 SFLETDELMAMMEEMVARLFRETIGVE-VERPFRRIPYREAMERFGSDRPDLRFGMELVD 302

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E    S F+VF+  ++     +   +  +    +R   D   E A+  G  GLA++  
Sbjct: 303 LSEMVKGSSFKVFASTVADGGRVKAINVKGR-ADWSRKVIDSWGEVAQQLGAKGLAWLAV 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R          GPVAK L+      I    + + GD   F+A  P        + R  +A
Sbjct: 362 R-----EEGTKGPVAKFLSESEWHDIMKATEAETGDLLLFVADRPRVVNEVLGELRIRLA 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL +I    ++F W+  FP   ++EEE +    H+PFT P      L  +D   ++A  
Sbjct: 417 RELDLIPAGVYKFAWVTHFPLLSYDEEEGRYYAEHHPFTSPVDEDIPLLKSDPSQVRAKA 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G  R H  E+    F  +G + E  + +FG L  AF+ G PPHGGIA 
Sbjct: 477 YDMVLNGYEVGGGSRRIHRREIQEMMFEALGFTMEEAKEQFGYLLEAFEYGAPPHGGIAF 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G DR+VMLL G  N+R+   FP + +   L+ G+PS VS  QL EL +   E  
Sbjct: 537 GFDRLVMLLAGRSNLRDTIAFPKTASATCLMTGAPSPVSKHQLDELHITHREQE 590


>gi|220929365|ref|YP_002506274.1| aspartyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|254781726|sp|B8I3F1|SYD_CLOCE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219999693|gb|ACL76294.1| aspartyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 593

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 228/592 (38%), Positives = 343/592 (57%), Gaps = 10/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACFEIAK 63
           R+H C +L  S++G  V + GWV + R  G ++F+D+RD  GI Q+V  + D   F+ AK
Sbjct: 10  RSHKCTELSSSNIGEKVTVMGWVQKQRNLGSLVFIDLRDRTGIVQLVFTDKDGEMFDKAK 69

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+V+   G V +RSAE +N  + TG+IE+ A ++ ILS +E  P+ +    +  E 
Sbjct: 70  TIRSEYVIATVGTVAARSAEAVNKKMATGEIEIIASELRILSSSETPPMYIEENSDVNEQ 129

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYRFLDLRR  + +N++ R R+    R       F+E  TPIL  S+PEGARD+LVP
Sbjct: 130 TRLKYRFLDLRRPDMQRNLILRHRVAKVARDYYDQNGFLEIETPILIKSTPEGARDYLVP 189

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQLLM SG+DRYFQIA CFRDED R+DR P EF Q+D+EMSF
Sbjct: 190 SRVHPGKFFALPQSPQLYKQLLMVSGYDRYFQIAKCFRDEDLRADRQP-EFTQIDIEMSF 248

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V  DD+L   E  ++  F+E    + V   F R+ Y +A+ R+G+DKPD+R  + + N++
Sbjct: 249 VNVDDVLEVNEGFVKKAFKEALGVD-VETPFTRMPYAEAMERFGSDKPDIRFGMELVNMS 307

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +   +  F+VF+  +++       AI AKG    +R   D + +  ++    G+A+I   
Sbjct: 308 DLVANCGFKVFTDAVAMGGSVR--AINAKGCAKFSRKEIDALVDLVKTYKAKGMAWISI- 364

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              S         AK ++    +AI  R   + GD   F+A             R  IA+
Sbjct: 365 ---SQENEIKSSFAKFMSEDEMKAILNRAQAEAGDLICFVADKNNVVFDALGQLRLEIAR 421

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L I+N + F+F W+ +FP +E++EE+++    H+PFT P          D   ++A  Y
Sbjct: 422 KLDILNPDEFKFLWVTEFPLFEYDEEDQRWAAKHHPFTSPMDEDLQYLDTDPGRVRAKAY 481

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H+ E+  + F  +G ++E    +FG L  AF+ G PPHGG+A G
Sbjct: 482 DMVLNGVELGGGSIRIHIQELQAKMFKMLGFTEEDANRKFGFLLEAFKYGTPPHGGMAFG 541

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+VML+    ++R+V  FP  QN    +  +P  V   Q+ EL + I + 
Sbjct: 542 LDRLVMLMAKRNSIRDVIAFPKVQNASCPMSNAPDVVDETQIEELHISIAKE 593


>gi|254852143|ref|ZP_05241491.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|300764814|ref|ZP_07074804.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|258605446|gb|EEW18054.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|300514490|gb|EFK41547.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
          Length = 591

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 228/597 (38%), Positives = 335/597 (56%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +    
Sbjct: 60  LEIADSVRNEFVVTIKGTVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +++I    E++L  V +E  N       F R+ Y +A+ R+G+DKPD+R  + 
Sbjct: 239 LETSFLTKEEIQAITEDMLVDVVKEAKNITI-DKPFPRMTYKEAMDRFGSDKPDIRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + NV++     +F+VF   +      +     A     +R   D +  +  + G  GLA+
Sbjct: 298 LQNVSDVVKDVDFKVFQSAIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E+G +   GP+AK         ++  L  +DGD   F A       +     RN
Sbjct: 358 LKV---EAGELK--GPIAKFFPEEKATELKASLQAEDGDLLLFAADKADIVAASLGALRN 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + 
Sbjct: 413 KLGKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVM 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGG
Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 533 IALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKKE 589


>gi|226224120|ref|YP_002758227.1| aspartyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|259511864|sp|C1KVG6|SYD_LISMC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225876582|emb|CAS05291.1| aspartyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|328465557|gb|EGF36786.1| aspartyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 591

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 228/597 (38%), Positives = 335/597 (56%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +    
Sbjct: 60  LEIADSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNSSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +++I    E++L  V +E  N       F R+ Y +A+ R+G+DKPD+R  + 
Sbjct: 239 LETSFLTKEEIQAITEDMLVDVVKEAKNITI-DKPFPRMTYKEAMDRFGSDKPDIRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + NV++     +F+VF   +      +     A     +R   D +  +  + G  GLA+
Sbjct: 298 LQNVSDVVKDVDFKVFQSAIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E+G +   GP+AK         ++  L  +DGD   F A       +     RN
Sbjct: 358 LKV---EAGELK--GPIAKFFPEEKATELKASLQAEDGDLLLFAADKADIVAASLGALRN 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + 
Sbjct: 413 KLGKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVM 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGG
Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 533 IALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKKE 589


>gi|315634730|ref|ZP_07890014.1| aspartate--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476678|gb|EFU67426.1| aspartate--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 588

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 209/592 (35%), Positives = 332/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RSHYCGALNRANIGQEVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+ ++I + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPDNQINKNMATGEVEVLAKALKIYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G+++     +     F  + + +A+ R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAPEVREIMERMVHGLWQNIIGVD--LGKFPVMTWHEAMNRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF    +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DLVKEVDFKVFQGPANDPNGRVAVIRVPNGSEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G  +   P+AK L     +A+  R+  Q+GD  FF A             R  + ++
Sbjct: 358 INAGLESVQSPIAKFLTEDVWKALAERVKAQNGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E + +E  +   H+PFT P+         +  +  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFERD-DEGNLAAMHHPFTSPRDFTPEQLEAEPTTAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGINEQEQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL +++V+  
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALAELSIQVVKAE 588


>gi|260548803|ref|ZP_05823025.1| aspartyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260407971|gb|EEX01442.1| aspartyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 594

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 232/594 (39%), Positives = 338/594 (56%), Gaps = 9/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R   T N N+++GQIE+  ++IE+L+ +E  P P+  +     E
Sbjct: 63  KARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLD+RR  + + +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EHRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  D+I++ ME +   +F +          F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLNDDEIMDLMEGMTVKLFNDLLGVKFEK--FRRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+       G          G  +R+  D   ++    G  GLAYI   
Sbjct: 300 ADLMQEVEFKVFAGPAKDPKGRIAALRVPGAGSLSRSQIDEYTKFVGIYGAKGLAYIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G      P+ K +  +  + +  R+  ++GD  FF A             R  I  
Sbjct: 360 EIEKGIEGLQSPIVKFIEPIVMK-LLERVGAENGDIVFFGADKAKVVNDAMGALRVKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +  C  +   W++DFP +E  ++  K    H+PFT+P+  +E +K ++     +  Y
Sbjct: 419 DLNLATCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTLPKSSVEDVK-SNPGEALSVAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PK
Sbjct: 536 LDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589


>gi|320539869|ref|ZP_08039528.1| aspartyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030055|gb|EFW12075.1| aspartyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 594

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 219/591 (37%), Positives = 328/591 (55%), Gaps = 7/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  GI QV  +PD    F+ A 
Sbjct: 2   RTEYCGQLDLSHVGQKVTLCGWVNRRRDLGGLIFIDMRDCTGIVQVFFDPDQQAAFDKAY 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R    IN  + TG++E+ A  +E+++ +E   LP+   +   E 
Sbjct: 62  DLRNEFCIQIVGTVRARPDSQINTEMTTGEVEVFAHALEVINHSEP--LPLDANQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R++I + +R  M +  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPDMAGRLKTRSKITSLVRHFMDSHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME + R ++ E    +     F  I +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVREVMEKLARELWLEVKGVD--LGRFPVITFEEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +   G         G    R   D  + +    G  GLA++    
Sbjct: 297 DLVKDVEFNVFSVPANDAKGRVATICVPGGAQLTRKLIDEYSAFVNIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L+     AI  R + Q GD  FF A +           R  + ++
Sbjct: 357 RSAGLAGVQSPIAKFLDADVLAAILARTNAQSGDILFFGADNIKIVTDALGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   + +   W++DFP +E +  E  +   H+PFT P         +   +  A  YD
Sbjct: 417 LALTKLDSWAPLWVVDFPMFEED-GEGGLVAMHHPFTAPCNMAPEALASMPTNAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    FS +GI++     +FG L  A + G P H G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHHGEMQQTVFSILGINEHEQREKFGFLLDALKYGTPLHAGMAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR+VMLL G  N+R+V  FP +     L+  +PS  +   L+EL + +++ 
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPAALQELAINVLKK 586


>gi|62287555|sp|Q6FEH6|SYD_ACIAD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 592

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 236/595 (39%), Positives = 338/595 (56%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPE 122
            VRSE+VL I G V  R   T N+N+++GQIE+  ++IE+L+ +E  P P         E
Sbjct: 63  KVRSEFVLKITGRVRRRYEGTENSNMVSGQIEVLGKEIEVLAQSETPPFPLNDDNINISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLD+RR  +   +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EHRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E          F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLNDDDIMDLMEGMTVKLFDELLGIKFDK--FQRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+       G          G   R+  D   ++    G  GLAYI   
Sbjct: 300 ADLMQDVEFKVFAGPAKDPKGRIAALRVPGAGALPRSAIDEYTKFVGIYGAKGLAYIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G      P+ K +  +  + +  R+  ++GD  FF A             R  I  
Sbjct: 360 EIEKGVEGLQSPIVKFIEPIVMQ-LLERVGAENGDIVFFGADKAKVVNDAMGALRVKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L ++ C  +   W++DFP +E  ++  K    H+PFT+P+  +E +K N      +  Y
Sbjct: 419 DLKLVTCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTLPKSSVEDVKAN-PGEALSVAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR++ML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PKK
Sbjct: 536 LDRLIMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQPKK 590


>gi|59711556|ref|YP_204332.1| aspartyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|81310972|sp|Q5E6A2|SYD_VIBF1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|59479657|gb|AAW85444.1| aspartyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 591

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 218/594 (36%), Positives = 324/594 (54%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG+L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD    FE+A 
Sbjct: 2   RTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDVFEVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ +   G V  R    +N ++ TG++EL A  +EI++ +    LP+   +   E 
Sbjct: 62  QLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELLATGLEIINRS--AALPLDFNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR++DLRR  +   I  R R  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVRRFLDENLFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++ N  E ++  +++E  +       F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTSQEVRNVTERLVHDMWKELLDVE--LGQFPVMPFSEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G   +R   D    +    G  GLA++    
Sbjct: 297 DLVKDVDFKVFSGPANDEKGRVAVIRVPGGASLSRKQIDEYGNFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN     AI  R   + GD   F A             R  +  +
Sbjct: 357 RAAGFEGVQSPVAKFLNEEVVNAILERTQAETGDIILFGADKAGIVSEAMGALRLKLGTD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E +  E  +   H+PFT P G        +     +  YD
Sbjct: 417 LELTDTSAWAPLWVVDFPMFEED-GEGNLHAMHHPFTSPLGVSAEELQANPAVANSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNAEMQTAVFGILGIEAKEQQEKFGFLLEALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+ MLL G +N+R+V  FP +     LL  +PS  +   L EL + +    KK
Sbjct: 536 DRLAMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAVKLAEKK 589


>gi|261868509|ref|YP_003256431.1| aspartyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413841|gb|ACX83212.1| aspartyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 592

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 214/593 (36%), Positives = 335/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  +++G  + LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RSHYCGALNRTNIGQEITLSGWVHRRRDLGGLIFIDMRDREGIVQVCFDPKYQKALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+ ++I + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIQGEVIARPDNQINKNMATGEVEVLAKVLKIYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +++  R +I   +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQHLKTRAKITGFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G+++     +     F  I + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAPEVREIMERMVHGLWQHTLGVD--LGKFPVITWQEAMRRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + +F++F    +   G        +G    R   D   ++    G  GLA++    
Sbjct: 298 DIVKNVDFKIFQGPANDPNGRVTLIRVPQGNEITRKQIDEYTQFVGIYGAKGLAWLKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R+  Q GD  FF A             R  + ++
Sbjct: 358 VNAGLEGVQSPIAKFLNEDVLKALFERVGAQTGDILFFGADKWQTATDSMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E + +E  +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFERD-DEGCLAAMHHPFTSPKDFTPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL +++V+  K
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSVANPQALSELSIQVVKTNK 589


>gi|229844589|ref|ZP_04464729.1| aspartyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229812838|gb|EEP48527.1| aspartyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 588

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 213/592 (35%), Positives = 332/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQEALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ + + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRVYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++ +    +     F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHGLWLDTIGVD--LGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVE 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF    +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVDFKVFQAPANDPNGRVAVIRVPNGNEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +++  R++ Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPIAKFLNEEVWKSLAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E + +E  +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFERD-DEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL +++ ++ 
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAIQVTKSE 588


>gi|254828247|ref|ZP_05232934.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258600635|gb|EEW13960.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 591

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 228/597 (38%), Positives = 336/597 (56%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +    
Sbjct: 60  LEIADSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNTSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +++I    E++L  V +E  N       F R+ Y +A+ R+G+DKPD+R  + 
Sbjct: 239 LETSFLTKEEIQAITEDMLVDVVKEAKNITI-EKPFPRMTYKEAMDRFGSDKPDIRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + NV++     +F+VF   +      +     A     +R   D +  +  + G  GLA+
Sbjct: 298 LQNVSDVVKDVDFKVFQSAIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E+G +   GP+AK         ++V L  +DGD   F A       +     RN
Sbjct: 358 LKV---EAGELK--GPIAKFFPEDKAAELKVALQAEDGDLLLFAADKADIVAASLGALRN 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++L +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + 
Sbjct: 413 KLGKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVM 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGG
Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 533 IALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKKE 589


>gi|46907747|ref|YP_014136.1| aspartyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|62287573|sp|Q71ZF1|SYD_LISMF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|46881016|gb|AAT04313.1| aspartyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
          Length = 591

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 228/597 (38%), Positives = 335/597 (56%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +    
Sbjct: 60  LEIADSVRNEFVVTIKGTVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +++I    E++L  V +E  N       F R+ Y +A+ R+G+DKPD+R  + 
Sbjct: 239 LETSFLTKEEIQAITEDMLVDVVKEAKNITI-DKPFPRMTYKEAMDRFGSDKPDIRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + NV++     +F+VF   +      +     A     +R   D +  +  + G  GLA+
Sbjct: 298 LVNVSDVVKDVDFKVFQSAIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E+G +   GP+AK         ++  L  +DGD   F A       +     RN
Sbjct: 358 LKV---EAGELK--GPIAKFFPEEKATELKASLQAEDGDLLLFAADKADIVAASLGALRN 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + 
Sbjct: 413 KLGKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVM 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGG
Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 533 IALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKKE 589


>gi|16272271|ref|NP_438483.1| aspartyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260581215|ref|ZP_05849034.1| aspartyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174503|sp|P43817|SYD_HAEIN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|1573287|gb|AAC21981.1| aspartyl-tRNA synthetase (aspS) [Haemophilus influenzae Rd KW20]
 gi|260092140|gb|EEW76084.1| aspartyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 588

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 217/592 (36%), Positives = 332/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPDNQINKNMATGEVEVLAKELRIYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++ +    +     F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHGLWLDTIGVD--LGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVEFKVFNEPANNPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    + +  R++ Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPIAKFLNEDVWKGLAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFSPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+  
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVKAE 588


>gi|78067521|ref|YP_370290.1| aspartyl-tRNA synthetase [Burkholderia sp. 383]
 gi|97196577|sp|Q39D20|SYD_BURS3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|77968266|gb|ABB09646.1| aspartyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 600

 Score =  622 bits (1605), Expect = e-176,   Method: Composition-based stats.
 Identities = 227/597 (38%), Positives = 330/597 (55%), Gaps = 8/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG +    +G  V L GWV R R HGG+IF+D+RD  G+ QVV +PD    F  A+
Sbjct: 4   RTEYCGLVTEHLLGQTVSLCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFATAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + I GLV +R   T+NA + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GVRNEFCVQIKGLVRNRPEGTVNAGLKSGKIEVLCHELNVLNASVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR N G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRTNAGQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E+++R +F+   +    +  F  + Y +A+ R+G+DKPDLR  +    +T
Sbjct: 242 LGEQEIRDLFEDMIRHIFKTTIDVELDAT-FPVMPYSEAMARFGSDKPDLRVQLEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G        KG   +R   D   E+ R  G  GLA+I    
Sbjct: 301 DAMKDVDFKVFSTPANAKDGRVAALRVPKGSELSRGDIDGYTEFVRIYGAKGLAWIKVNE 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+  +  AI  R   +DGD  FF A             R  I   
Sbjct: 361 KAKGRDGLQSPIVKNLHDASIAAILERTGAEDGDIIFFAADRAKVVNDSLGALRLKIGHS 420

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E+++E+ +   AH+PFT P+         D     A
Sbjct: 421 EFGKANGLVHAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGGI
Sbjct: 481 KAYDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHGGI 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V   QLREL +R+ +  +
Sbjct: 541 AFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDERQLRELHIRLRQPEQ 597


>gi|52841708|ref|YP_095507.1| aspartyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|62287535|sp|Q5ZVG2|SYD_LEGPH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|52628819|gb|AAU27560.1| aspartyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 593

 Score =  622 bits (1605), Expect = e-176,   Method: Composition-based stats.
 Identities = 227/590 (38%), Positives = 334/590 (56%), Gaps = 4/590 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH C  +    +   + + GWVH  R HGG+IFLDIRD  G+ QVV  P+    F IA+
Sbjct: 2   RTHYCSAVNELSLDKQITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+V+ + G+V  R    IN  + TG++E+   ++EIL+ +   P      +   E 
Sbjct: 62  KLRSEFVVRVTGIVRKRPEGMINDKMETGRVEVIGTQLEILNQSPTPPFLPDDHQIINED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R+KYR++DLRR  + K +  R ++ + +R  +  +NF++  TP+LT ++PEGARD+LVP
Sbjct: 122 LRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF QLD+EM+F
Sbjct: 182 SRVHPGQFYALPQSPQLFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DIL  +E +L+ VF+E  N         R+ Y +A+ RYG+DKPDLRNP+ + ++ 
Sbjct: 241 INEEDILQLIEGLLKIVFKEILNITLPDKL-PRMSYKEAMTRYGSDKPDLRNPLELIDIA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F VF+   + N G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 300 DLVKDCDFNVFASAANDNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVND 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K L+     +I  R++ Q GD  FF A             RN +  +
Sbjct: 360 LSAGMAGLQSPILKFLSETAVHSILNRVEAQTGDVIFFGADKAHVVNESMGALRNKLGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             +IN + ++  W++D+P +E + +  K+   H+PFT PQ        +      A  YD
Sbjct: 420 RNLIN-SGWQLLWVVDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTLAKAYD 478

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+EI  G IR H  E+    F  +GI ++    +FG L  A Q G PPHGGIA GI
Sbjct: 479 IVINGYEIGGGSIRIHQPELQKTVFDLIGIDEQEAHEKFGFLLDALQYGAPPHGGIALGI 538

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           DR+ MLL  + ++R+V  FP +Q     L  +PS     QL ELG+R+  
Sbjct: 539 DRLAMLLTDSTSIRDVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLAP 588


>gi|54308305|ref|YP_129325.1| aspartyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|62287565|sp|Q6LT53|SYD_PHOPR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|46912733|emb|CAG19523.1| Putative aspartyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 597

 Score =  622 bits (1605), Expect = e-176,   Method: Composition-based stats.
 Identities = 214/597 (35%), Positives = 333/597 (55%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD    FE+A 
Sbjct: 2   RTQYCGHLNKSLEGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDVFELAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V  R    +N  + TG++E+ A  +EI++ ++   LP+   +   E 
Sbjct: 62  QLRNEFCIRLIGEVRVRPESQVNKKMATGEVEILATGLEIINRSD--VLPLDFNQNNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKFRYLDLRRPEMSDRIKLRAKASSFVRRFLDENAFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++  +++E  N +     F  + +++A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSAEQVREITEKMITEMWKELLNVD--LGTFPIMQFEEALRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DILKDVDFKVFSGPANDEKGRVAVIRVPGGASLSRKQIDEYTKFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E+G      PVAK LN      +  R   + GD   F A             R  + ++
Sbjct: 357 REAGFAGVQSPVAKFLNEDVVANLLDRTQAETGDIILFGADSKRVVTEALGALRLKLGED 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + ++  W++DFP +E +  E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LELTDKSIWKPLWVIDFPMFEED-GEGNLHAMHHPFTSPLGITAEELAVNPAAANSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +++    F+ +GI +   +++FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNADMQSAVFNILGIEEGEQQSKFGFLLEALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+VMLL G  N+R+V  FP +     LL  +PS  + + L+EL + +    K+  K
Sbjct: 536 DRLVMLLCGTDNIRDVIAFPKTTAASCLLTNAPSLANPDSLKELSIAVAIAKKETAK 592


>gi|258593720|emb|CBE70061.1| Aspartyl-tRNA synthetase / asparaginyl-tRNA synthetase
           (Aspartate-/asparagine-tRNA ligase) (AspRS) [NC10
           bacterium 'Dutch sediment']
          Length = 593

 Score =  622 bits (1605), Expect = e-176,   Method: Composition-based stats.
 Identities = 229/590 (38%), Positives = 335/590 (56%), Gaps = 10/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEI 61
            RT  CG L   DVG  V L GWVHR R HGG++F+D+RD  GITQ V NP+      E+
Sbjct: 9   KRTGHCGLLRSPDVGKSVVLMGWVHRRRDHGGLVFIDLRDREGITQTVFNPEFHPEAHEV 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +R+E+V+ I G V  R   T N  + TG IE+ A++ +IL+ A+    P+  + +  
Sbjct: 69  ARRMRAEFVVAISGRVQLRPPGTENTLLPTGAIEIVAEEAQILNEAKPPVFPIEEQTDVA 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR  YR+LDLRR ++  N+  R ++  +    +    FIE  TP+LT S+PEGARD+L
Sbjct: 129 EEIRLTYRYLDLRRPSMLYNLRLRHKVTQAAHSYLDRHGFIEVETPMLTRSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM +G DRY+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 189 VPSRLNPGEFYALPQSPQLFKQLLMVAGIDRYYQIVKCFRDEDLRADRQP-EFTQIDLEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV++DD+L   E ++  +FE  +  +++   F R+ Y +AI R+G D PD R  + + +
Sbjct: 248 SFVDRDDVLEVTEGLVVALFEA-AGKSSLPRPFPRLTYAEAIDRFGLDTPDTRFGMELAD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     E + F++ ++         +   G   +R   D + ++A+  G  GLA+   
Sbjct: 307 LTELLCGVEAKAFAEPIAQGGVVRGMNVKGCG-AFSRTQIDGLVDYAKGVGAKGLAWFKV 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D         P+AK L  +  E +  RL  ++GD    +A             R  + 
Sbjct: 366 SAD-----GLQSPLAKFLGPIILERLAERLKGEEGDLLLLVADQAKTAAETLGRLRVKLG 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            EL +I+ +     W++DFP  E++ E+ +    H+PFT P      L   D   I+A  
Sbjct: 421 HELKLIDESALAVTWVIDFPLLEYDREQGRWQAMHHPFTAPMDEDLPLFDTDPGRIRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR H  +V  + F+ +GI  E    +FG L  A + G PPHGG+A 
Sbjct: 481 YDLVVNGQELGGGSIRIHRRDVQSRMFAALGIGAEEARAKFGFLMDALEYGAPPHGGLAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR++ LL GA ++R+V  FP +Q   DL+  +PS V   QLREL +++
Sbjct: 541 GFDRVIALLAGAASIRDVIAFPKTQKAVDLMTQAPSPVDARQLRELSIKL 590


>gi|68248924|ref|YP_248036.1| aspartyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81336665|sp|Q4QNM1|SYD_HAEI8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|68057123|gb|AAX87376.1| aspartyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 588

 Score =  622 bits (1605), Expect = e-176,   Method: Composition-based stats.
 Identities = 218/592 (36%), Positives = 332/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++  ++ +    +     F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHDLWLDTIGVD--LGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVEFKVFNEPANNPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R++ Q GD  FF A             R  +  +
Sbjct: 358 INAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGCD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFSPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS V+ + L EL + +V+  
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFVNPQALEELAISVVKAE 588


>gi|86608637|ref|YP_477399.1| aspartyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|97196961|sp|Q2JMA8|SYD_SYNJB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|86557179|gb|ABD02136.1| aspartyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 601

 Score =  622 bits (1605), Expect = e-176,   Method: Composition-based stats.
 Identities = 238/605 (39%), Positives = 353/605 (58%), Gaps = 19/605 (3%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--A 57
           +HR  RT  CG++  + +G  V L GW+ R R HGG+IFLD+RD  GI Q+VA+P     
Sbjct: 5   IHRPARTLYCGEVRPAHIGQTVTLYGWIDRRRDHGGVIFLDLRDRSGIVQLVADPQKTPQ 64

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPV 114
            + +A  VR+E+V+ + G V  R  ++ N  + TG++E+ A+++E+LS         +  
Sbjct: 65  SYPLAGEVRNEYVVRVTGTVQQRPPDSFNPRLATGEVEIYAEQLEVLSPVGKQLPFSVSG 124

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASS 173
               E  E IR +YR+LDLRR+ + +N+  R R+I ++R  +   E F+E  TPILT S+
Sbjct: 125 EEAEEVREEIRLRYRYLDLRRERMSRNLQLRHRVIQAIRRFLEDEEGFVEVETPILTRST 184

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           PEGARD+LVPSRVN G ++ALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P E
Sbjct: 185 PEGARDYLVPSRVNPGEWFALPQSPQLFKQLLMVAGVDRYYQIARCFRDEDLRADRQP-E 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F QLDMEMSF++Q+ IL   E ++  +F+       +   F R+ Y +A+ RYG+DKPD 
Sbjct: 244 FTQLDMEMSFMDQEGILELNERLICHIFKTVKGI-HLPRPFPRLTYAEAMARYGSDKPDT 302

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARS 350
           R  + + +V+E F  S F+VF+K+L+     ++  +P      +         + +    
Sbjct: 303 RFGMELVDVSEVFQGSRFKVFAKVLAEGGLIKILPVPGGDEKISNTRIKPGGDLFKLVTQ 362

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
            G  GLA+I  R D   ++  +G + + L+    + +      + GD   F AG      
Sbjct: 363 YGAGGLAFIRVRPD---SLDTIGALKESLSPEQEKRLLDLTQAKPGDLLLFGAGPAAVVN 419

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                 R H+ QELG+I  N     WI DFP +E+N EE +++  H+PFT P     +  
Sbjct: 420 ESLGRLRLHLGQELGLIPENALNLLWITDFPMFEFNAEENRLEALHHPFTAPHPDDLA-- 477

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             DL + +A  YDLV NG E+  G +R +  E+  Q F  +G++ E   ++FG L  AF+
Sbjct: 478 --DLKTARAQAYDLVWNGVEVGGGSLRIYQREIQEQVFQAIGLTPEQARDKFGFLLEAFE 535

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G+DR+VMLL G  ++R+V  FP +Q    LL G+PS+V  +QL+EL + 
Sbjct: 536 YGTPPHGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQARCLLTGAPSSVEAKQLKELHVA 595

Query: 591 IVENP 595
               P
Sbjct: 596 STYQP 600


>gi|120612283|ref|YP_971961.1| aspartyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|166225310|sp|A1TT99|SYD_ACIAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|120590747|gb|ABM34187.1| aspartyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 604

 Score =  622 bits (1605), Expect = e-176,   Method: Composition-based stats.
 Identities = 226/599 (37%), Positives = 338/599 (56%), Gaps = 13/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG +  + +G  V L+GWV+R R HGG+IF+D+RD  G  QVV +PD    F+ A+
Sbjct: 4   RSHYCGLVTEALMGQTVTLAGWVNRRRDHGGVIFIDLRDREGNVQVVCDPDRADMFKTAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV +R   T N ++ +G+IE+   ++ +L+ +   P  +  E    E+
Sbjct: 64  GVRNEFCVQVKGLVRARPEGTTNDSLKSGRIEVLCHELNVLNPSVTPPFQMDDENLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + +N++ R +    +R  +  E FI+  TP+L  S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPYMQRNLMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM +G+DRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    + ++  VF+   + +     F  + Y DA  R+G+DKPDLR  +    +T
Sbjct: 242 LNEEEIRAIFQRMVTEVFKTQLDVDLGE--FPIMTYQDAAFRFGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKG----GGGNRAFCDRMNEWARSQGQPGLAYI 359
           E     +F+VFS   ++  G  V      G    GG +R   D   E+ +  G  GLAYI
Sbjct: 300 EVMKDVDFKVFSGAANMQGGRVVALRVPGGARENGGLSRGEIDAYTEFVKIYGAKGLAYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G      P+ K+++      I  R   QDGD  FF A             R  
Sbjct: 360 KVNELAKGRDGLQSPIVKNIHDAAIAEILKRTGAQDGDLLFFGADKTKVVNDAIGALRLK 419

Query: 420 IAQ-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           I   E G  N    N +   W++DFP +E++E++ +    H+PFT P+ G E L   D  
Sbjct: 420 IGHSEFGRKNGLFENVWAPLWVVDFPMFEYDEDDARWVAVHHPFTSPKDGHEDLMDTDPG 479

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              A  YD+V NG+E+  G +R H +EV  + F+ + ++ E    +FG L  A Q G PP
Sbjct: 480 KCLAKAYDMVLNGWELGGGSVRIHRAEVQSKVFAALKLTPEDARAKFGYLLDALQYGAPP 539

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           HGG+A G+DR++ L+ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+   
Sbjct: 540 HGGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLRNP 598


>gi|83746621|ref|ZP_00943671.1| Aspartyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|83726755|gb|EAP73883.1| Aspartyl-tRNA synthetase [Ralstonia solanacearum UW551]
          Length = 622

 Score =  622 bits (1605), Expect = e-176,   Method: Composition-based stats.
 Identities = 225/595 (37%), Positives = 331/595 (55%), Gaps = 8/595 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEI 61
           + RT  CG +    +G  V LSGW HR R HGG+IF+D+RD  G+ QVV +PD    F++
Sbjct: 17  QMRTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKV 76

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+ L + G+V +R   T N N+ +G++E+   ++ +L+ +   P  +  +    
Sbjct: 77  AEGVRNEFCLQVKGIVRARPEGTTNPNLASGKVEVLCHELTVLNASVTPPFQLDDDNLS- 135

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R  +R LDLRR  +  N+  R ++   +R  +  + FI+  TP+LT S+PEGARD+L
Sbjct: 136 ETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYL 195

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E 
Sbjct: 196 VPSRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCET 254

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++R VF+   +    +  F  + + +A+ R+G+DKPDLR  +   +
Sbjct: 255 SFLGEQEIRDLFEEMIRTVFKNTMSVELDAT-FPVMEFREAMARFGSDKPDLRVKLEFTD 313

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VT+     +F+VFS   +   G  V      GG  +R   D   ++    G  GLA+I  
Sbjct: 314 VTDVMKDVDFKVFSNPANAEGGRVVALRVPGGGALSRGDIDAYTKFVEIYGAKGLAWIKV 373

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+ K+L+      I  R   QDGD  FF A             R  I 
Sbjct: 374 NEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGADRAKVVNDAMGALRLKIG 433

Query: 422 Q-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             E G       + ++  W++DFP +E++EE+ +    H+PFT P+         D    
Sbjct: 434 HSEFGKSTGLFEDAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHREYLETDPGKC 493

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R    EV  + F  + I +E    +FG L  A Q G PPHG
Sbjct: 494 IAKAYDMVLNGWEIGGGSVRIFQEEVQSKVFRALKIGEEEARAKFGFLLDALQYGAPPHG 553

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+ 
Sbjct: 554 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLR 608


>gi|239501692|ref|ZP_04661002.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 592

 Score =  622 bits (1605), Expect = e-176,   Method: Composition-based stats.
 Identities = 233/597 (39%), Positives = 338/597 (56%), Gaps = 9/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R   T N N+++GQIE+  ++IE+L+ +E  P P+  +     E
Sbjct: 63  KARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLD+RR  + + +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EHRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F +          F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLNDDDIMDLMEGMTVKLFNDLLGVKFEK--FRRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+       G          G   R+  D   ++    G  GLAYI   
Sbjct: 300 ADLMQEVEFKVFAGPAKDPKGRIAALRVPGAGSLTRSQIDEYTKFVGIYGAKGLAYIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G      P+ K +  +  + +  R+  ++GD  FF A             R  I  
Sbjct: 360 EIEKGIEGLQSPIVKFIEPIVMQ-LLERVGAENGDIVFFGADKAKIVNDAMGALRVKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +  C  +   W++DFP +E  ++  K    H+PFT+P+  +E +K ++     +  Y
Sbjct: 419 DLNLATCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTLPKSSVEDVK-SNPGEALSVAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           +DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E  KK +
Sbjct: 536 LDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQQKKEV 592


>gi|262371057|ref|ZP_06064379.1| aspartyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262313943|gb|EEY94988.1| aspartyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 594

 Score =  622 bits (1605), Expect = e-176,   Method: Composition-based stats.
 Identities = 240/594 (40%), Positives = 341/594 (57%), Gaps = 9/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDETVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPE 122
            VRSE+VL I G V  R A T NAN+++GQIE+  ++IE+L+ +E  P P         E
Sbjct: 63  KVRSEFVLKITGRVRRRYAGTENANMVSGQIEVLGKEIEVLAASETPPFPLNDDNTNISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLD+RR  +   +  R+++ N +R       F++  TPILT ++PEGARD+LV
Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKLTNLIRNYFEDNGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E  +       F R+ Y DA+R Y +DKPDLR P+ + +V
Sbjct: 242 FMSDDDIMDLMETLTVKMFKELLDVQFDK--FPRMTYTDAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+       G  V       G   R+  D   ++    G  GLAYI   
Sbjct: 300 ADLMQEVEFKVFAGPAKDPKGRIVALRVPGAGSLPRSQIDEYTKFVGIYGAKGLAYIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G      P+ K +  +  + ++ R+  ++GD  FF A             R  +  
Sbjct: 360 ELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFFGADKAKVVNDAMGALRIKVGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +  C  +   W++DFP +E  ++  K    H+PFT+P+  +E +K N   +  +  Y
Sbjct: 419 DLKMSTCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTLPKSSVEDVKNN-PGAALSVAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG EI  G +R H  E+    F  +GI +E  E +F  L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTEIGGGSLRIHNLEMQKAIFEALGIGEEEAEEKFSFLLNALRYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR+VML+ G  ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PK
Sbjct: 536 LDRLVMLMTGGASIRDVIAFPKTKTAECPLTQAPAPVESNQLRDLGIRLREKPK 589


>gi|169632443|ref|YP_001706179.1| aspartyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|238688247|sp|B0VRC7|SYD_ACIBS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169151235|emb|CAO99921.1| aspartyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 592

 Score =  622 bits (1605), Expect = e-176,   Method: Composition-based stats.
 Identities = 233/597 (39%), Positives = 336/597 (56%), Gaps = 9/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R   T N N+++GQIE+  ++IE+L+ +E  P P+  +     E
Sbjct: 63  KARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLD+RR  +   +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EHRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F +          F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLNDDDIMDLMEGMTVKLFNDLLGVKFEK--FRRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+       G          G   R+  D   ++    G  GLAYI   
Sbjct: 300 ADLMQEVEFKVFAGPAKDPKGRIAALRVPGAGSLTRSQIDEYTKFVGIYGAKGLAYIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G      P+ K +  +  + +  R+  ++GD  FF A             R  I  
Sbjct: 360 EIEKGIEGLQSPIVKFIEPIVMQ-LLERVGAENGDIVFFGADKAKIVNDAMGALRVKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +  C  +   W++DFP +E   ++ K    H+PFT+P+  +E +K ++     +  Y
Sbjct: 419 DLNLATCE-WAPLWVVDFPMFE-EADDGKWTSVHHPFTLPKSSVEDVK-SNPGEALSVAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           +DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E  KK  
Sbjct: 536 LDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQQKKEA 592


>gi|153854668|ref|ZP_01995918.1| hypothetical protein DORLON_01916 [Dorea longicatena DSM 13814]
 gi|149752772|gb|EDM62703.1| hypothetical protein DORLON_01916 [Dorea longicatena DSM 13814]
          Length = 603

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 225/592 (38%), Positives = 345/592 (58%), Gaps = 11/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFE 60
            RTH C +L  ++VG  V + GWV + R  GG++F+D+RD  GI QVV      ++A  E
Sbjct: 9   KRTHRCAELSAANVGEKVTIMGWVQKNRNKGGLVFVDVRDRSGIIQVVFEEGKCEAALIE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +R+E+V+ I G V  RS   +N ++ TG+IE+  +++ ILS +E  P  +    + 
Sbjct: 69  KAAKLRAEYVVAIVGTVAKRSG-AVNDHLATGEIEVIPEELRILSESETPPFHIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  L +N++ R+++    R  +  E F+E  TP+L  S+PEGARD+
Sbjct: 128 KEEVRLKYRYLDLRRPDLQRNLMMRSKVATLTRQFLAEEGFLEIETPVLIKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+ QG FYALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRIQQGQFYALPQSPQLFKQLLMCSGYDRYFQIAKCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD++   E +L  +F+E      VS    R+ + +A+ R+G+DKPD+R  + + 
Sbjct: 247 LSFVDVDDVIEVNERLLAKLFKEVLGVE-VSLPIQRMTWQEAMDRFGSDKPDIRFGMELT 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NVT+     EF VF   +             +GG   R   D++ ++A+  G  GLAYI 
Sbjct: 306 NVTDVVKDCEFVVFKNAIENGGTVRGINAKGQGG-MARKKIDKLVDFAKDYGAKGLAYIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               E G V      AK +     +A+   +  ++GD   F A             R  +
Sbjct: 365 IH--EDGTVK--SSFAKFMTDDEMKALIEAMGGENGDLLLFAADKNKVVWDTLGALRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++ +++ N ++F W+ +FP  EW+EE+ +    H+PFTMP         +D   ++A 
Sbjct: 421 ARQMELLDKNEYKFLWVTEFPLLEWSEEQNRYTAMHHPFTMPMEEDLQYIDSDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R    ++  + F  +G ++E  + +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIFDQDIQSKMFEVLGFTEEQAQEQFGFLLTAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VML+    ++R+V  FP  ++  DL+  +P  V  +QL ELG+ ++
Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASDLMTEAPGHVDAKQLEELGIAVI 592


>gi|188591186|ref|YP_001795786.1| aspartyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|238692931|sp|B2AH15|SYD_CUPTR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|170938080|emb|CAP63064.1| aspartate tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 602

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 225/602 (37%), Positives = 336/602 (55%), Gaps = 8/602 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CF 59
           M   RTH CG +     G  V L+GWV R R HGG+IF+D+RD  G+ QVV +PD    F
Sbjct: 1   MSSMRTHYCGLVTEQFSGQEVALTGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A+ +R+E+ + + G V  R A T NAN+ +G+IE+   ++ +L+ +   P  +  +  
Sbjct: 61  KAAEEIRNEFCIRVTGKVRPRPAGTENANLTSGKIEVLCHELTVLNPSVTPPFQLDDDNL 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+ R  +R LDLRR  +  N+  R ++   +R  + A+ FI+  TP+L  S+PEGARD
Sbjct: 121 S-ETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKFLDAQGFIDIETPMLGKSTPEGARD 179

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D 
Sbjct: 180 YLVPSRVNPGHFFALPQSPQIFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDC 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E+++R VF+   + + +   F  + + +A+ R+G+DKPDLR  +  
Sbjct: 239 ETSFLTEQEIRDLFEDMMRTVFKNAIDVD-LDAKFPVMEFREAMARFGSDKPDLRVKLEF 297

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +TE     +F+VFS   + + G  V      GG  +R   D   ++    G  GLA+I
Sbjct: 298 TELTEVMKDVDFKVFSGPANSDNGRVVGLRVPGGGAISRGEIDAYTQFVGIYGAKGLAWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G      P+ K+L+      I  R   QDGD  FF A             R  
Sbjct: 358 KVNEVAKGRDGLQSPIVKNLHDAAIAEILKRTGAQDGDIIFFGADKAKVVNDSIGALRLK 417

Query: 420 IAQ-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           I   + G  N    + ++  W++DFP +E++EE+ +    H+PFT P+         D  
Sbjct: 418 IGHSDFGKANGLFEDAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPG 477

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              A  YD+V NG+E+  G +R   S++  + F  + I+ E    +FG L  A Q G PP
Sbjct: 478 KCLAKAYDMVLNGWEMGGGSVRIFRSDIQSKVFRALKINDEEARAKFGYLLDALQYGAPP 537

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGG+A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS+V  +QLREL +R+    
Sbjct: 538 HGGLAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSSVDEKQLRELHIRLRTAE 597

Query: 596 KK 597
            K
Sbjct: 598 PK 599


>gi|169794766|ref|YP_001712559.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|184159464|ref|YP_001847803.1| aspartyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213157906|ref|YP_002320704.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215482310|ref|YP_002324492.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|260557129|ref|ZP_05829345.1| aspartyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|301347109|ref|ZP_07227850.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301510404|ref|ZP_07235641.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301597043|ref|ZP_07242051.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|332852216|ref|ZP_08434021.1| aspartate--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332870438|ref|ZP_08439202.1| aspartate--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332876305|ref|ZP_08444080.1| aspartate--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|226735095|sp|B7GWN1|SYD_ACIB3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226735096|sp|B7I8M5|SYD_ACIB5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238688027|sp|B0V550|SYD_ACIBY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238690995|sp|B2HYL7|SYD_ACIBC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169147693|emb|CAM85556.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|183211058|gb|ACC58456.1| Aspartyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213057066|gb|ACJ41968.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213986159|gb|ACJ56458.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|260409235|gb|EEX02537.1| aspartyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|322509377|gb|ADX04831.1| aspS [Acinetobacter baumannii 1656-2]
 gi|323519401|gb|ADX93782.1| aspartyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332729346|gb|EGJ60686.1| aspartate--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332732175|gb|EGJ63443.1| aspartate--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332735577|gb|EGJ66629.1| aspartate--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 592

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 233/597 (39%), Positives = 337/597 (56%), Gaps = 9/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R   T N N+++GQIE+  ++IE+L+ +E  P P+  +     E
Sbjct: 63  KARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLD+RR  + + +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EHRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F +          F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLNDDDIMDLMEGMTVKLFNDLLGVKFEK--FRRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+       G          G   R+  D   ++    G  GLAYI   
Sbjct: 300 ADLMQEVEFKVFAGPAKDPKGRIAALRVPGAGSLTRSQIDEYTKFVGIYGAKGLAYIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G      P+ K +  +  + +  R+  ++GD  FF A             R  I  
Sbjct: 360 EIEKGIEGLQSPIVKFIEPIVMQ-LLERVGAENGDIVFFGADKAKIVNDAMGALRVKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +  C  +   W++DFP +E  ++  K    H+PFT+P+  +E +K ++     +  Y
Sbjct: 419 DLNLATCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTLPKSSVEDVK-SNPGEALSVAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           +DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E  KK  
Sbjct: 536 LDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQQKKEA 592


>gi|328675296|gb|AEB27971.1| Aspartyl-tRNA synthetase/Aspartyl-tRNA(Asn) synthetase [Francisella
           cf. novicida 3523]
          Length = 591

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 226/596 (37%), Positives = 348/596 (58%), Gaps = 9/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F +A S
Sbjct: 2   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFRVADS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI++G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 62  LRSEFVIKAEGVVNLRPEGQENKNIVSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E       +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 241 DEAFIMSTMERMIAGLFKETIGVEF-TTPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + +F+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 300 DMQNEDFKVFSGP-ANDPQSRVIAMRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 359 SLSQGKDGLQSPIVKNISEETLFKVIEKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + + + +   W++DFP +E ++   ++   H+PFT P+   +E L+ ++   + +  
Sbjct: 419 DLVLFDKD-WAPLWVVDFPMFEKDD--NRLYAMHHPFTAPKVSSVEELERSNPEELSSRA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS E    +FG +  A   G P HGGIA 
Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ + +   K
Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAVKKEESK 591


>gi|332286022|ref|YP_004417933.1| aspartyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330429975|gb|AEC21309.1| aspartyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 596

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 224/598 (37%), Positives = 333/598 (55%), Gaps = 8/598 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT   G++    +   V L GWVHR R HGG+IF+D+RD  G+ Q+V +PD+   F  A+
Sbjct: 2   RTCYTGEVSKEHLDQTVTLFGWVHRRRDHGGVIFIDLRDRAGLAQIVVDPDNVEAFSTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + GLV  R   T N ++ +G+IE+  ++IE+L+ +   P  +  +    E+
Sbjct: 62  HIRNEFCVRVTGLVRLRPDGTSNPDLKSGEIEVLCREIEVLNASVTPPFQLDDDNLS-ET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + +N++ R R+   +R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPQMQQNLMLRYRVSIEVRKYLDNLGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 181 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++ I    E ++R VF    +   +   F  + +++A+RRYG+DKPDLR  +   +V 
Sbjct: 240 LNEEQIREIFEGMIRHVFARVQSVE-LPVAFPTMTWEEAMRRYGSDKPDLRVKLEFVDVG 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +      V      G    R+  D   ++    G  GLAYI    
Sbjct: 299 DLMQDVEFKVFSAPANDPASRVVALRIPGGASMPRSEIDAYTKFVAIYGAKGLAYIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
             S       P+ K++++     +  R   Q GD  FF A             R  +   
Sbjct: 359 AASIPEGLQSPIVKNISVDALAKVIERTGAQSGDLIFFGADKVKVVNDAIGALRVKVGHS 418

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  N      ++  W++DFP +E++EEE +   AH+PFT P+ G E L   D  S  A
Sbjct: 419 EFGQQNGLFEAGWKPLWVVDFPMFEYDEEEGRYFAAHHPFTSPKDGHEDLLEKDPASALA 478

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+E+  G +R H +++  + F  + I  E    +FG L  A Q G PPHGG+
Sbjct: 479 KAYDLVLNGWEVGGGSVRIHRADIQTKVFQALNIDAEEARAKFGFLLDALQYGAPPHGGV 538

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+V ++  A+++R+V  FP +Q    LL  +PS V  +QLREL +R+     K
Sbjct: 539 AFGLDRLVTMMAKAESIRDVIAFPKTQRAQCLLTQAPSGVDEKQLRELHIRLRNAEVK 596


>gi|262371676|ref|ZP_06064955.1| aspartyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262311701|gb|EEY92786.1| aspartyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 593

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 240/598 (40%), Positives = 344/598 (57%), Gaps = 9/598 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYPE 122
             RSE+VL I G V  R   T NAN+++GQIE+ A++IE+L+ +E  P P+  E     E
Sbjct: 63  KARSEFVLKITGRVRRRYEGTENANMVSGQIEVLAKEIEVLAASETPPFPLNDENTNISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLD+RR  +   +  R+++ N +R       F++  TPILT ++PEGARD+LV
Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYFEDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F E  N       F R+ Y DA+R Y +DKPD+R P+ + +V
Sbjct: 242 FMSDDDIMDLMEGLTVKMFNELLNVKFDK--FERMTYADAMRDYASDKPDMRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+       G  V       G   R+  D   ++    G  GLAYI   
Sbjct: 300 ADLMQDVEFKVFAGPAKDPKGRIVALRVPGAGSLPRSAIDEYTKFVGIYGAKGLAYIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G      P+ K +  +  + ++ R+  ++GD  FF A             R  I  
Sbjct: 360 ELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFFGADKAKIVNDAMGALRVKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +  C  +   W++DFP +E  ++  K    H+PFT+P+  +E +K ++  +  +  Y
Sbjct: 419 DLNLATCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTLPKSSVEEVK-SNPGAALSVAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG EI  G +R +  E+    F  +GI +E  E +F  L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTEIGGGSLRIYTLEMQKAIFEALGIGEEEAEEKFSFLLNALRYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           +DR++ML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PK   K
Sbjct: 536 LDRLIMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPKTEEK 593


>gi|160878711|ref|YP_001557679.1| aspartyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|189082092|sp|A9KIA6|SYD_CLOPH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|160427377|gb|ABX40940.1| aspartyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 598

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 230/595 (38%), Positives = 342/595 (57%), Gaps = 11/595 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
           +RTH C +L  S+VG  V + GWV + R  GGIIF+D+RD  G+ Q++          FE
Sbjct: 9   HRTHRCTELSNSNVGEIVTVMGWVQKSRNKGGIIFVDLRDRSGLLQIIFEEGDIGTEMFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ + G V +RS   +N N++TG IE+ A ++ ILS +E  P P+    + 
Sbjct: 69  KASKLRSEFVVAVVGKVETRSG-AVNENLLTGTIEVRATELRILSESETPPFPIEEGSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  L +N++ R+++    R  +  E F+E  TP+LT S+PEGARD+
Sbjct: 128 KEELRLKYRYLDLRRPDLVRNLMLRSKVATLTRQFLSDEGFLEIETPMLTKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G+FYALPQ+PQ +KQLLM SG+DRYFQI  CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGNFYALPQSPQIFKQLLMVSGYDRYFQIVKCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E +L+ +F+E    + VS    R+ + +A+ RYG+DKPD R  + + 
Sbjct: 247 LSFVDVDDVISVNERLLQKMFKESIGID-VSLPIQRMTWREAMDRYGSDKPDTRFGMELK 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+E      F VF+  L             +G    R   D + E+A+  G  GLAY+ 
Sbjct: 306 NVSELVKDCGFAVFTGALENGGSVRGINANGQG-EMPRKKIDALIEFAKGYGAKGLAYLS 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D           +K +      A+   ++ + GD  FF A           + R  I
Sbjct: 365 INEDG----TYKSSFSKFMTEEELSALVAAMEAKPGDLLFFAADKDKVVFDVLGNLRLEI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ L +++ N + F W+ +FP  E++EEE +    H+PFTMP      L   D   ++A 
Sbjct: 421 ARNLELLDKNTYNFLWVTEFPLLEYSEEEGRYTAMHHPFTMPMDEDLPLLETDPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R   + V  + F  +G +KE    RFG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTEVGGGSVRIFQNNVQEKMFEVLGFTKEEAYERFGFLLNAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+DR+VML+    ++R+V  FP  ++   LL  +P+ V  +QL EL + + +  
Sbjct: 541 YGLDRLVMLMAKEDSIRDVIAFPKVKDASCLLTDAPNVVDDKQLEELSIALAKKA 595


>gi|317051008|ref|YP_004112124.1| aspartyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946092|gb|ADU65568.1| aspartyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 592

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 241/588 (40%), Positives = 347/588 (59%), Gaps = 11/588 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTHSCG LG+ ++G  V L GW HR R HGG+IF+D+RD  G+TQ+V +P  +    E  
Sbjct: 9   RTHSCGQLGIENIGESVTLMGWAHRRRDHGGLIFVDLRDRDGLTQLVMDPQVNQEVHEKG 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +S+RSE+VL I G V  R   T+N  + TG IE+   ++ I+SVA+  P  +    +  E
Sbjct: 69  ESIRSEYVLAIVGTVRHRPEGTVNEKLKTGAIEVVVSELRIVSVAKTPPFMIDEYTDVSE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRR  + K+I+ R R+  SMR  +  + F++  TP+LT S+PEGARD+LV
Sbjct: 129 NLRLKYRYLDLRRPEIQKHIINRHRLTRSMREYLYEKGFLDIETPVLTKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G F+ALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R+DR P EF QLDMEMS
Sbjct: 189 PSRVNPGRFFALPQSPQLFKQLLMVSGYDKYFQIVKCFRDEDLRADRQP-EFTQLDMEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++ +   +E +++ ++ + ++       F R+ Y +A+ R+G+DKPD R  + + ++
Sbjct: 248 FIDREQLFALIEGLMQKLWRDIADREI-PVPFPRLSYQEAMDRFGSDKPDTRFGLELQDL 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++    S F+VF   L      +           +R   D + +     G  GLAYI  R
Sbjct: 307 SDLDF-SGFKVFQSALENGGQVKAING-VGCEHLSRKDIDDITKDLAVYGAKGLAYIKVR 364

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E        P+ K L     EAI  R+  + GD  FF+A       +     R  +AQ
Sbjct: 365 ENE-----YQSPITKFLGEATLEAIVKRVGAKPGDCIFFMADTRSVVANSLGQLRLILAQ 419

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            LG+I+ N + F W+ DFP  EW+E+ K+    H+PFT P      L  +D  + +A  Y
Sbjct: 420 RLGLIDNNQYNFLWVTDFPLLEWDEDSKRFMAMHHPFTSPLEEDFGLLESDPGAARARAY 479

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG EI  G IR H  E+  + FS +GI +E    +FG L  A + G PPHGGIA G
Sbjct: 480 DLVLNGSEIGGGSIRIHTMELQQRMFSLLGIGEEEARMKFGFLLDALEFGAPPHGGIAFG 539

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           +DRI M+L G  ++R+V  FP +Q    LL  +PS V   QL+EL ++
Sbjct: 540 VDRIAMILSGTSSIRDVIAFPKTQKATCLLTDAPSVVDQRQLQELHIK 587


>gi|54294481|ref|YP_126896.1| aspartyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|62287531|sp|Q5WWA3|SYD_LEGPL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|53754313|emb|CAH15790.1| Aspartyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 593

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 227/590 (38%), Positives = 337/590 (57%), Gaps = 4/590 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH C  +    +   + + GWVH  R HGG+IFLDIRD  G+ QVV  P+    F IA+
Sbjct: 2   RTHYCSAVNELSLDKQITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+V+ + G+V  R    IN  + TG++E+   ++EIL+ +   P      +   E 
Sbjct: 62  KLRSEFVVRVTGIVRKRPEGMINDKMETGRVEVIGTQLEILNQSPTPPFLPDDHQVINED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R+KYR++DLRR  + K +  R ++ + +R  +  +NF++  TP+LT ++PEGARD+LVP
Sbjct: 122 LRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF QLD+EM+F
Sbjct: 182 SRVHPGQFYALPQSPQLFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DIL  +E +L+ VF+E  N         R+ Y +A+ RYG+DKPDLRNP+ + ++ 
Sbjct: 241 INEEDILQLIEGLLKIVFKEILNITLPDKL-PRMPYKEAMTRYGSDKPDLRNPLELIDIA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + +F VF+   + N G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 300 DLVKNCDFNVFASAANDNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVND 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K L+    ++I  R+++Q GD  FF A             RN +  +
Sbjct: 360 LSAGMAGLQSPILKFLSETAVQSILNRVEVQTGDVIFFGADKAHVVNESMGALRNKLGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             +IN + ++  W++D+P +E + +  K+   H+PFT PQ        +      A  YD
Sbjct: 420 RNLIN-SGWQLLWVVDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTLAKAYD 478

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+EI  G IR H  E+    F  +GI ++    +FG L  A Q G PPHGGIA GI
Sbjct: 479 IVINGYEIGGGSIRIHQPELQKTVFDLIGIDEQEAHEKFGFLLDALQYGAPPHGGIALGI 538

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           DR+ MLL  + ++R+V  FP +Q     L  +PS     QL ELG+R+  
Sbjct: 539 DRLAMLLTDSTSIRDVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLAP 588


>gi|207742315|ref|YP_002258707.1| aspartyl-trna synthetase (aspartate--trna ligase)(asprs) protein
           [Ralstonia solanacearum IPO1609]
 gi|206593703|emb|CAQ60630.1| aspartyl-trna synthetase (aspartate--trna ligase)(asprs) protein
           [Ralstonia solanacearum IPO1609]
          Length = 607

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 225/595 (37%), Positives = 331/595 (55%), Gaps = 8/595 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEI 61
           + RT  CG +    +G  V LSGW HR R HGG+IF+D+RD  G+ QVV +PD    F++
Sbjct: 2   QMRTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKV 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+ L + G+V +R   T N N+ +G++E+   ++ +L+ +   P  +  +    
Sbjct: 62  AEGVRNEFCLQVKGIVRARPEGTTNPNLASGKVEVLCHELTVLNASVTPPFQLDDDNLS- 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R  +R LDLRR  +  N+  R ++   +R  +  + FI+  TP+LT S+PEGARD+L
Sbjct: 121 ETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E 
Sbjct: 181 VPSRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++R VF+   +    +  F  + + +A+ R+G+DKPDLR  +   +
Sbjct: 240 SFLGEQEIRDLFEEMIRTVFKNTMSVELDAT-FPVMEFREAMARFGSDKPDLRVKLEFTD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VT+     +F+VFS   +   G  V      GG  +R   D   ++    G  GLA+I  
Sbjct: 299 VTDVMKDVDFKVFSNPANAEGGRVVALRVPGGGALSRGDIDAYTKFVEIYGAKGLAWIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+ K+L+      I  R   QDGD  FF A             R  I 
Sbjct: 359 NEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGADRAKVVNDAMGALRLKIG 418

Query: 422 Q-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             E G       + ++  W++DFP +E++EE+ +    H+PFT P+         D    
Sbjct: 419 HSEFGKSTGLFEDAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHREYLETDPGKC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R    EV  + F  + I +E    +FG L  A Q G PPHG
Sbjct: 479 IAKAYDMVLNGWEIGGGSVRIFQEEVQSKVFRALKIGEEEARAKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+ 
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLR 593


>gi|237734562|ref|ZP_04565043.1| aspartyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382382|gb|EEO32473.1| aspartyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 587

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 227/598 (37%), Positives = 352/598 (58%), Gaps = 12/598 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+  RTH+ G+L +SDV   V L GWV + R  G ++F+D+RD YGITQ+V N +     
Sbjct: 1   MYMNRTHNNGELRISDVNKIVELKGWVAKKRNLGSLVFIDLRDRYGITQIVLNEE--MEA 58

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + K +++E+VL + G V+ RS++  N N+ TG IE+ A +I+I++ A+  P+    + + 
Sbjct: 59  LGKDIKNEYVLHVVGKVIERSSK--NPNMPTGDIEIEAAQIDIINTAKVTPIYTTDDTDA 116

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR+LDLRR  +   I+ R +I +S+R  +    FI+  TP L  S+PEGARDF
Sbjct: 117 SEDARMQYRYLDLRRPVMQNKIIMRHKITSSIRNFLDNHEFIDIETPYLNRSTPEGARDF 176

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFYALPQ+PQ +KQLLM SGF+RY+QIA CFRDED R DR P EF Q+D+E
Sbjct: 177 LVPSRVHNGSFYALPQSPQLFKQLLMVSGFERYYQIARCFRDEDLRLDRQP-EFTQVDVE 235

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+  D+I++  E +L  V ++      +     R+ + +A+ +YG DKPD+R  + + 
Sbjct: 236 MSFMTTDEIISIGEQLLAQVMKDVKGIE-LQLPLPRMTWHEAMEKYGIDKPDIRFGLELV 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           N+ E     EF VF   L  +   +   +  +    +R   D++ +  ++    GLA++ 
Sbjct: 295 NLNEVVKDVEFMVFKSALEADGHVKGINVKGEADNFSRKAIDKLTDVVKTYKAKGLAWLK 354

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNH 419
            +  ++      GP+AK  N      +   +D  D D   F+        C   A  RNH
Sbjct: 355 VKAGKA-----EGPIAKFFNEEQMTKLLKAMDASDNDLLLFVSDAKYNVVCDALAALRNH 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +EL + N + F F W++DFP +E+++E ++    H+PFT P+        ND  +  A
Sbjct: 410 LGKELKLFNPDEFAFLWVVDFPMFEYDDETERYYAVHHPFTRPKDSDIDKIENDPANCLA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NGFE+  G  R +  E+  +AF  +G ++E ++++FG    AFQ G PPHGG 
Sbjct: 470 DAYDIVLNGFELGGGSQRIYEQELQERAFRALGFTQERIDSQFGWFVEAFQYGTPPHGGF 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+ MLL G++N+REV  FP + +    +  +PS V   QL ELG+ ++E+ ++
Sbjct: 530 ALGLDRLAMLLTGSENIREVIAFPKNASAVCPMSKAPSEVDNAQLEELGIAVIEDEQE 587


>gi|260220363|emb|CBA27828.1| Aspartyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 602

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 226/597 (37%), Positives = 337/597 (56%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD    F++A+
Sbjct: 2   RSHYCGLVTEALLGQTVTLCGWVNRRRDHGGVIFVDVRDREGYVQVVCDPDRAEMFKVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I GLV +R   T N ++ +G+IE+   ++ +L+ +   P     E    E+
Sbjct: 62  DIRNEYCVQIKGLVRARPEGTTNDSLKSGKIEVLCHELIVLNESVTPPFQ-LDEDNLSET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N++ R R+   +R  + A  F++  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPYMQNNLMLRYRVAMEVRKFLDANGFVDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI +  + ++  VF+     +     F  + Y DA R YG+DKPDLR  +    +T
Sbjct: 240 LTEEDIRDMFQGMITTVFKNTIGVDLGE--FPVMTYQDAARLYGSDKPDLRVNLEFAELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKG----GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +     +F+VFS   ++  G  V      G    GG +R   D   E+ +  G  GLAYI
Sbjct: 298 DVMKDVDFKVFSGAATMKGGRVVALRIPGGSAENGGISRGEIDAYTEFVKIYGAKGLAYI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G      P+ K+++     A+  R   Q+GD  FF A             R  
Sbjct: 358 RVNDLSKGRDGLQSPIVKNIHDAALNAVLERTGAQNGDLIFFGADKEKIVNDAIGALRIK 417

Query: 420 IAQ-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           I   E G  N      ++  W++DFP +E++EE ++    H+PFT P+ G E        
Sbjct: 418 IGHSEFGKKNGLFTGGWKPLWVVDFPMFEYDEESQRYTAVHHPFTAPKEGHEDWMVTAPE 477

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              +  YD+V NG+E+  G +R H ++V  + F  + I+ E  + +FG L  A Q G PP
Sbjct: 478 KCISQGYDMVLNGWEMGGGSVRIHRADVQQKVFDALKITPEEAQLKFGFLLDALQYGAPP 537

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           HGG+A G+DRIV L+ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+ 
Sbjct: 538 HGGLAFGLDRIVTLMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRLR 594


>gi|254931454|ref|ZP_05264813.1| aspartyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293583006|gb|EFF95038.1| aspartyl-tRNA synthetase [Listeria monocytogenes HPB2262]
          Length = 591

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 228/597 (38%), Positives = 336/597 (56%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL++++  P  +    
Sbjct: 60  LEIADSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNMSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +++I    E++L  V +E  N       F R+ Y +A+ R+G+DKPD+R  + 
Sbjct: 239 LETSFLTKEEIQAITEDMLVDVVKEAKNITI-DKPFPRMTYKEAMDRFGSDKPDIRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + NV++     +F+VF   +      +     A     +R   D +  +  + G  GLA+
Sbjct: 298 LQNVSDVVKDVDFKVFQSAIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E+G +   GP+AK         ++  L  +DGD   F A       +     RN
Sbjct: 358 LKV---EAGELK--GPIAKFFPEEKATELKASLQAEDGDLLLFAADKADIVAASLGALRN 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + 
Sbjct: 413 KLGKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVM 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGG
Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 533 IALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKKE 589


>gi|312881483|ref|ZP_07741275.1| aspartyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370849|gb|EFP98309.1| aspartyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 592

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 221/597 (37%), Positives = 334/597 (55%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  +EIA 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEIAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ ++   LP+   +   E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPDSQVNQDMATGEVEVIAKGLEIINRSD--VLPLDFNQNNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDLETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D++  T E ++R +++E  + +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSADEVRATTEKMVREMWQELLDVD--LGQFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   E+    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVIRVPGGASLTRKQIDSYGEFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN      I  R     GD   F A             R  + ++
Sbjct: 357 RSAGLEGIQSPVAKFLNEDVINGILDRTQADSGDIILFGADKASVVAEALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E + +E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LELTDESAWAPLWVVDFPMFEED-DEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNAEMQAAVFDILGIDAQEQQLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K  +
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAASCLLTDAPSVANPAALEELAIAVTVAKEKNAE 592


>gi|153832460|ref|ZP_01985127.1| aspartyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148871255|gb|EDL70127.1| aspartyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 592

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 223/597 (37%), Positives = 335/597 (56%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPESQVNKDMATGEVEILAKGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +  T E ++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVRATTEKMVREMWQELLNVDLGE--FPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   E+    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN      I  R   + GD   F A             R  + ++
Sbjct: 357 RAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+     +   W++DFP +E + +E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LGLTKEGTWAPLWVVDFPMFEED-DEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K  +
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVTVAKEKDAE 592


>gi|207727909|ref|YP_002256303.1| aspartyl-trna synthetase (aspartate--trna ligase)(asprs) protein
           [Ralstonia solanacearum MolK2]
 gi|206591151|emb|CAQ56763.1| aspartyl-trna synthetase (aspartate--trna ligase)(asprs) protein
           [Ralstonia solanacearum MolK2]
          Length = 607

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 225/595 (37%), Positives = 331/595 (55%), Gaps = 8/595 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEI 61
           + RT  CG +    +G  V LSGW HR R HGG+IF+D+RD  G+ QVV +PD    F++
Sbjct: 2   QMRTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKV 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+ L + G+V +R   T N N+ +G++E+   ++ +L+ +   P  +  +    
Sbjct: 62  AEGVRNEFCLQVKGIVRARPEGTTNPNLASGKVEVLCHELTVLNASVTPPFQLDDDNLS- 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R  +R LDLRR  +  N+  R ++   +R  +  + FI+  TP+LT S+PEGARD+L
Sbjct: 121 ETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E 
Sbjct: 181 VPSRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++R VF+   +    +  F  + + +A+ R+G+DKPDLR  +   +
Sbjct: 240 SFLGEQEIRDLFEEMIRTVFKNTMSVELDAT-FPVMEFREAMARFGSDKPDLRVKLEFTD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VT+     +F+VFS   +   G  V      GG  +R   D   ++    G  GLA+I  
Sbjct: 299 VTDVMKDVDFKVFSNPANAEGGRVVALRVPGGGALSRGDIDAYTKFVEIYGAKGLAWIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+ K+L+      I  R   QDGD  FF A             R  I 
Sbjct: 359 NEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGADRAKVVNDAMGALRLKIG 418

Query: 422 Q-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             E G       + ++  W++DFP +E++EE+ +    H+PFT P+         D    
Sbjct: 419 HSEFGKSTGLFEDAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGKC 478

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R    EV  + F  + I +E    +FG L  A Q G PPHG
Sbjct: 479 IAKAYDMVLNGWEIGGGSVRIFQEEVQSKVFRALKIGEEEARAKFGFLLDALQYGAPPHG 538

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+ 
Sbjct: 539 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLR 593


>gi|149186863|ref|ZP_01865173.1| aspartyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148829530|gb|EDL47971.1| aspartyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 618

 Score =  622 bits (1604), Expect = e-176,   Method: Composition-based stats.
 Identities = 309/612 (50%), Positives = 412/612 (67%), Gaps = 9/612 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+C  L   +VG  VRLSGWVH  R HGG++F+D+RDHYGITQ+VA+ DS    
Sbjct: 1   MHAYRTHTCAQLTKDNVGETVRLSGWVHNKRDHGGVLFVDLRDHYGITQIVADSDSRALP 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + + ++ E V+ IDG V +R    +N N+ TG+IE+ A++IEI S AE+LPL V    +Y
Sbjct: 61  VLEKLKLESVVTIDGTVKARDEVAVNKNLPTGEIEVFAREIEIQSRAEDLPLIVNQAEDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYRF+DLRR+ +HKNI+ R R+I S+R RM  + F E  TPIL ASSPEGARD+
Sbjct: 121 PEETRLKYRFVDLRRERVHKNIMLRNRVITSLRRRMTDQGFSEFQTPILGASSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQ +KQLLM +GFDRYFQIAPCFRDED R+DR P EFYQLD E
Sbjct: 181 LVPSRLHPGRFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDLRADRSP-EFYQLDFE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT--VSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q+D+   +E VL GVFEEF++G T   +  F RI Y +++ +YGTDKPDLRNP+I
Sbjct: 240 MSFVTQEDVFQAIEPVLAGVFEEFADGKTVTPAGEFPRIPYAESMLKYGTDKPDLRNPLI 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +VT+HF  S F +F KI+       V   P      +R F D MN+WAR +G  GL Y
Sbjct: 300 ISDVTDHFTTSGFGLFEKIVGTGGRVRVVPAP-NTHEKSRKFFDEMNDWARREGFAGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  +  E G     GP+AK+      E +   L + + D  FF AG        A  AR 
Sbjct: 359 VTRKGGEFG-----GPIAKNHGTEGMEKLYAELGLGENDGLFFAAGKEKDAAKLAGAART 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+ELG+I   CF+FCWI+DFP +E++E+ K++DF+HNPF+MPQG ME+L+  D L I 
Sbjct: 414 RVAEELGLIEEGCFKFCWIVDFPMFEYDEDAKRVDFSHNPFSMPQGEMEALETKDPLDIL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG+E++SG IRNH  ++M +AF   G S+  V+  F G+  AF+ G PPHGG
Sbjct: 474 AWQYDIVCNGYELSSGAIRNHRPDIMYKAFEIAGYSQADVDANFSGMIEAFKLGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
            A GIDRIVMLL    N+REV  FP++Q   D++MG+PS V+  QLR++ +R+     + 
Sbjct: 534 SAPGIDRIVMLLADEPNIREVIAFPLNQKAQDMMMGAPSVVAPSQLRDVHIRLGGAALEA 593

Query: 599 LKISVTTILRNV 610
            K +      ++
Sbjct: 594 QKGASGAEKTDM 605


>gi|309388966|gb|ADO76846.1| aspartyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 591

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 234/592 (39%), Positives = 351/592 (59%), Gaps = 11/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTH CG++   ++   V + GWV + R HGG+IF DIRD  GI QVV NP+   + F  
Sbjct: 9   KRTHLCGEVSEKEIKKQVTIMGWVQKRRDHGGVIFTDIRDRSGIVQVVFNPEIGESLFAK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A ++RSE+V+ I G V SR    +N ++ TG+IE+ A ++ IL  A+  P+ +    +  
Sbjct: 69  ADTLRSEYVIAITGEVRSRPEGNVNLDLPTGKIEIKAIELRILDKAKTPPIQIEDNIDTG 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR KYR+LDLRR  + K I  R ++  + R  +    F E  TPILT SSPEGARD+L
Sbjct: 129 EDIRLKYRYLDLRRPKMKKIIGLRHQVTKTTRDYLDQNGFWEIETPILTKSSPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G F+ALPQ+PQ +KQLLM SG +RYFQIA CFRDED R++R P EF Q+DMEM
Sbjct: 189 VPSRVNPGEFFALPQSPQIFKQLLMVSGMERYFQIARCFRDEDLRANRQP-EFTQIDMEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q++++   E +++ +F        V N   R+ Y++AI R+G+DKPDLR  + + +
Sbjct: 248 SFVKQEEVMEITEGLMKELFS--IGEIEVPNKIERMTYEEAINRFGSDKPDLRFGMELKD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E    S+F +FS  ++     +       G    R+  D   E+ +     GLA+I  
Sbjct: 306 LSELVKDSDFNIFSGTVAKGGQVKGINFK-GGADSPRSTIDGFEEYVKMFKAKGLAWIAL 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R +         P+AK L+    EAI+ +L+ Q GD    +A       +   + R  IA
Sbjct: 365 REN-----GLKSPIAKFLSEAEIEAIKSKLEAQKGDLLLIVADQASFVAAALGNLRLKIA 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +E G+I    ++F WI+DFP +E++E E ++   H+PFT P     +   +D  S+++  
Sbjct: 420 KENGLIPAEVYKFVWIIDFPLFEYDENEDRLTAIHHPFTAPNEEDVNKLDSDPTSVRSKA 479

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR + +++  + FS + IS++  E++FG L  AF  G PPHGGIA 
Sbjct: 480 YDLVLNGEELGGGSIRINNNKLQEKVFSALNISQKEQEDKFGYLLEAFDYGTPPHGGIAF 539

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G+DR++M++    ++R+V  FP +Q     L  +P+ V  +QL+ELG+ +  
Sbjct: 540 GLDRLMMIISRTSSIRDVIAFPKTQKATSPLTNAPAKVDKKQLKELGISLRS 591


>gi|119471739|ref|ZP_01614099.1| aspartate tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119445362|gb|EAW26650.1| aspartate tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 592

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 213/592 (35%), Positives = 330/592 (55%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF-EIAK 63
           R+  CG L  + V   V L GW+++ R  GG+IF+D+RD  G+ QVV +P+     + A 
Sbjct: 2   RSIYCGQLNKTHVDQEVELCGWINKRRDLGGLIFVDLRDREGLVQVVFDPEVEGLMDTAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R E+ + + G+V +R    +N ++ TG++E+   ++ I++ +E   LP+   +   E 
Sbjct: 62  KLRQEFCVQLKGVVRARPESQVNKDMATGEVEILGTELTIINRSEP--LPLDFNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 RRLKYRYLDLRRLEMSDRIKLRAKASSFVRRFLDENGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDLETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    E ++R +++   N +    +F  + Y +A+  YG+DKPDLRNP+ + +V 
Sbjct: 239 MSSDQVRGMTEKMIREMWQSLLNVD--LGDFPIMPYSEAMSLYGSDKPDLRNPMKLVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVLTVPGGAKLSRKQLDDYTKFIGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G      P+AK LN      +  R + Q GD   F A             R  I  +
Sbjct: 357 RDAGVEGVQSPIAKFLNEDVITQLLERTNAQTGDIILFGADKRNTVNEAMGALRLKIGVD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I N N +   W++DFP +E + +E  +   H+PFT P+    S    +  +  +  YD
Sbjct: 417 LEITNLNSWAPLWVVDFPMFEED-DEGTLHAVHHPFTAPKDISASELEANPAAAISDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +++   AF  +GI  +  +++FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNADMQEAAFRILGIDAQEQQDKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     LL  +PS  + + L EL + +VE P
Sbjct: 536 DRLVMLLCGTDNIRDVIAFPKTTQASCLLTDAPSKANNDSLTELAISVVEKP 587


>gi|57339604|gb|AAW49789.1| hypothetical protein FTT0007 [synthetic construct]
          Length = 627

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 227/595 (38%), Positives = 346/595 (58%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 30  RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 89

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 90  LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 149

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 150 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 209

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 210 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 268

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E       +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 269 DEAFIMSTMERMIAGLFKETIGVEF-ATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 327

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 328 DMQNEEFKVFSGP-ANDPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 386

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++GD  FF AG            R  I +
Sbjct: 387 SLSQGKEGLQSPIVKNISEETLFKVIDKTSAKEGDLLFFGAGKAKIVNDSMGALRAKIGE 446

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E ++   ++   H+PFT P+   +E L   +   + +  
Sbjct: 447 DLDLFNKD-WAPLWVVDFPMFEKDD--NRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 503

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS +    +FG +  A   G P HGGIA 
Sbjct: 504 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 563

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GIDR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ + +  +
Sbjct: 564 GIDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAVKKEER 618


>gi|94309323|ref|YP_582533.1| aspartyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|123081434|sp|Q1LRG2|SYD_RALME RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|93353175|gb|ABF07264.1| aspartyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 602

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 226/602 (37%), Positives = 336/602 (55%), Gaps = 8/602 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CF 59
           M   RTH CG +    +G  V L+GWV R R HGG+IF+D+RD  G+ QVV +PD    F
Sbjct: 1   MSSMRTHYCGLVTEQLIGQEVALTGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A+ +R+E+ + I G V  R A T NAN+ +G+IE+   ++ +L+ +   P  +  +  
Sbjct: 61  KAAEEIRNEFCIRITGKVRPRPAGTENANLTSGKIEVLCHELTVLNPSVTPPFQLDDDNL 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+ R  +R LDLRR  +  N+  R ++   +R  + A+ FI+  TP+L  S+PEGARD
Sbjct: 121 S-ETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDAQGFIDIETPMLGKSTPEGARD 179

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D 
Sbjct: 180 YLVPSRVNPGHFFALPQSPQIFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDC 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E+++R VF+   + + +   F  + + +A+ R+G+DKPDLR  +  
Sbjct: 239 ETSFLTEQEIRDLFEDMMRTVFKNAIDVD-LDAKFPVMEFREAMARFGSDKPDLRVKLEF 297

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +TE     +F+VFS   + + G  V      GG  +R   D   ++    G  GLA+I
Sbjct: 298 TELTEVMKDVDFKVFSGPANSDNGRVVGLRVPGGGAISRGEIDAYTQFVAIYGAKGLAWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G      P+ K+L+      I  R   QDGD  FF A             R  
Sbjct: 358 KVNEVAKGRDGLQSPIVKNLHDAAIAEILKRTGAQDGDIIFFGADKAKIVNDAIGALRLK 417

Query: 420 IAQ-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           +   E G       + ++  W++DFP +E++EE+ +    H+PFT P+         D  
Sbjct: 418 VGHSEFGKSTGLFEDTWKPLWVIDFPMFEYDEEDARWVAMHHPFTSPKDEHLQYLETDPG 477

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              A  YD+V NG+E+  G +R +  +V  + F  + I+ E    +FG L  A Q G PP
Sbjct: 478 KCIAKAYDMVLNGWEMGGGSVRIYREDVQSKVFRALKINDEEARAKFGYLLDALQYGAPP 537

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGG+A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PSTV  +QLREL +R+    
Sbjct: 538 HGGLAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSTVDEKQLRELHIRLRAQE 597

Query: 596 KK 597
            K
Sbjct: 598 PK 599


>gi|221124310|ref|XP_002161330.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 604

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 226/597 (37%), Positives = 337/597 (56%), Gaps = 13/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG +  + +G  V L GWV+R R HGG+IF+D+RD  G  QVV +PD    F++A+
Sbjct: 4   RSHYCGLVTEALLGQTVTLCGWVNRRRDHGGVIFVDVRDREGYVQVVCDPDRAEMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I GLV +R   T N ++ +G+IE+   ++ +L+ +   P     E    E+
Sbjct: 64  DIRNEYCVQIKGLVRARPEGTTNDSLKSGKIEVLCHELIVLNESVTPPFQ-LDEDNLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N++ R R+   +R  + A  F++  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPYMQNNLMLRYRVAMEVRKFLDANGFVDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI +  + ++  VF+     +     F  + Y DA R YG+DKPDLR  +    +T
Sbjct: 242 LTEEDIRDMFQGMITTVFKNTIGVDLGE--FPVMTYQDAARLYGSDKPDLRVNLEFAELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKG----GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +     +F+VFS   ++  G  V      G    GG +R   D   E+ +  G  GLAYI
Sbjct: 300 DVMKDVDFKVFSGAATMKGGRVVALRIPGGSAENGGISRGEIDAYTEFVKIYGAKGLAYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G      P+ K+++     A+  R   Q+GD  FF A             R  
Sbjct: 360 RVNDLSKGRDGLQSPIVKNIHDAALNAVLERTGAQNGDLIFFGADKEKIVNDAIGALRIK 419

Query: 420 IAQ-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           I   E G  N      ++  W++DFP +E++EE ++    H+PFT P+ G E        
Sbjct: 420 IGHSEFGKKNGLFTGGWKPLWVVDFPMFEYDEESQRYTAVHHPFTAPKEGHEDWMVTAPE 479

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              +  YD+V NG+E+  G +R H ++V  + F  + I+ E  + +FG L  A Q G PP
Sbjct: 480 KCISQGYDMVLNGWEMGGGSVRIHRADVQQKVFDALKITPEEAQLKFGFLLDALQYGAPP 539

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           HGG+A G+DRIV L+ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+ 
Sbjct: 540 HGGLAFGLDRIVTLMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRLR 596


>gi|323493240|ref|ZP_08098369.1| aspartyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323312506|gb|EGA65641.1| aspartyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 592

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 219/597 (36%), Positives = 336/597 (56%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD +  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPDSQVNKDMATGEVEIIAKGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D++  T E ++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADEVRATTEKMVRDMWQELLNVDLGE--FPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   E+    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVIRVPGGASLTRKQIDGYGEFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L+      I  R   + GD   F A             R  + ++
Sbjct: 357 RAAGMEGIQSPVAKFLSEEVINGILDRTQAESGDIILFGADKANVVAEAMGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E + +E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LELTDESTWAPLWVVDFPMFEED-DEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQAAVFDILGIDAQEQQLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K  +
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAASCLLTDAPSLANPAALEELAIAVTAAKEKDAE 592


>gi|300705177|ref|YP_003746780.1| aspartate tRNA synthetase [Ralstonia solanacearum CFBP2957]
 gi|299072841|emb|CBJ44197.1| aspartate tRNA synthetase [Ralstonia solanacearum CFBP2957]
          Length = 622

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 224/595 (37%), Positives = 331/595 (55%), Gaps = 8/595 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEI 61
           + RT  CG +    +G  V LSGW HR R HGG+IF+D+RD  G+ QVV +PD    F++
Sbjct: 17  QMRTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKV 76

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+ L + G+V +R   T N N+ +G++E+   ++ +L+ +   P  +  +    
Sbjct: 77  AEGVRNEFCLQVKGIVRARPEGTTNPNLASGKVEVLCHELTVLNASVTPPFQLDDDNLS- 135

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R  +R LDLRR  +  N+  R ++   +R  +  + FI+  TP+LT S+PEGARD+L
Sbjct: 136 ETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYL 195

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E 
Sbjct: 196 VPSRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCET 254

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++R VF+   +    +  F  + + +A+ R+G+DKPDLR  +   +
Sbjct: 255 SFLGEQEIRDLFEEMIRTVFKNTMSVELDAT-FPVMEFREAMARFGSDKPDLRVKLEFTD 313

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VT+     +F+VFS   +   G  V      GG  +R   D   ++    G  GLA++  
Sbjct: 314 VTDVMKDVDFKVFSNPANAEGGRVVALRVPGGGALSRGDIDAYTKFVEIYGAKGLAWVKV 373

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+ K+L+      I  R   QDGD  FF A             R  I 
Sbjct: 374 NEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGADRAKVVNDAMGALRLKIG 433

Query: 422 Q-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             E G       + ++  W++DFP +E++EE+ +    H+PFT P+         D    
Sbjct: 434 HSEFGKSTGLFEDAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGKC 493

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R    EV  + F  + I +E    +FG L  A Q G PPHG
Sbjct: 494 IAKAYDMVLNGWEIGGGSVRIFQEEVQSKVFRALKIGEEEARAKFGFLLDALQYGAPPHG 553

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+ 
Sbjct: 554 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLR 608


>gi|255025791|ref|ZP_05297777.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 591

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 228/597 (38%), Positives = 335/597 (56%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +    
Sbjct: 60  LEIADSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNTSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +++I    E++L  V +E  N       F R+ Y +A+ R+G+DKPD+R  + 
Sbjct: 239 LETSFLTKEEIQAITEDMLVDVVKEAKNITI-EKPFPRMTYKEAMDRFGSDKPDIRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + NV+      +F+VF   +      +     A     +R   D +  +  + G  GLA+
Sbjct: 298 LQNVSNVVKDVDFKVFQSAIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E+G +   GP+AK         ++V L  +DGD   F A       +     RN
Sbjct: 358 LKV---EAGELK--GPIAKFFPEDKAAELKVALQAEDGDLLLFAADKADIVAASLGALRN 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++L +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + 
Sbjct: 413 KLGKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVM 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGG
Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 533 IALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKKE 589


>gi|260779181|ref|ZP_05888073.1| aspartyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605345|gb|EEX31640.1| aspartyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 592

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 223/597 (37%), Positives = 336/597 (56%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD +  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ A+   LP+   ++  E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPDSQVNKDMATGEVEIIAKGLEIINRAD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D++  T E ++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADEVRATTEKMVRDMWQELLNVD--LGQFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   E+    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVIRVPGGASLTRKQIDGYGEFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN      I  R   + GD   F A             R  + ++
Sbjct: 357 RAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANTVAEAMGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + N +   W++DFP +E + +E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LELTDENAWAPLWVVDFPMFEED-DEGNLHAMHHPFTSPLGVNAEELKANPAAANSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI  E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNAEMQAAVFDILGIDAEEQQLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K  +
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSVANPAALEELAIAVTAAKEKDAE 592


>gi|254506050|ref|ZP_05118194.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219550868|gb|EED27849.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 592

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 220/594 (37%), Positives = 335/594 (56%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD +  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPDSQVNKDMATGEVEIIAKGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D++  T E ++R +++E  + +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADEVRATTEKMVRDMWQELLSVDLGE--FPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   E+    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVIRVPGGASLTRKQIDGYGEFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L+      I  R   + GD   F A             R  + ++
Sbjct: 357 RAAGLEGIQSPVAKFLSEEVINGILERTQAESGDIILFGADKANVVAEAMGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + N +   W++DFP +E + +E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LELTDENAWAPLWVVDFPMFEED-DEGYLHAMHHPFTSPLGVTAEELKANPAAANSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHDAEMQAAVFDILGIEADEQQLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    KK
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVKAAEKK 589


>gi|323699397|ref|ZP_08111309.1| aspartyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459329|gb|EGB15194.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 606

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 244/595 (41%), Positives = 341/595 (57%), Gaps = 13/595 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           RTH   +L  +D+   V L GWV   R HGG+IFLD+RD  G+TQVV NP+      E A
Sbjct: 22  RTHHNNELTAADMDREVCLMGWVQFRRDHGGLIFLDLRDREGMTQVVFNPEDNATVHERA 81

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++R E+V+ + G V  R     N N+ITG+IE+     ++L+ +E  P P+    E  E
Sbjct: 82  HAIRPEYVVAVKGRVRPRPEGMANPNMITGEIEIEVTDYKLLNTSETPPFPIEDRVEVAE 141

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYRFLDLRR +L +N + R +   S+R  + A  F+E  TP+LT S+PEGARDFLV
Sbjct: 142 NLRLKYRFLDLRRPSLARNFILRNKAAQSVRRYLDALGFLEVETPVLTKSTPEGARDFLV 201

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVNQG FYALPQ+PQ +KQ+LM +G DRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 202 PSRVNQGEFYALPQSPQLFKQMLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDIEMS 260

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++  I +  E ++R +F E    N + + F R+ + DA+R YG DKPDLR  +   ++
Sbjct: 261 FVDEALIQDMAEGMVRTLFRETIGVN-LPDPFPRMTFADAMRDYGVDKPDLRFELKHIDI 319

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+ F  S F+VF+    V        +   G   +R   D   ++    G  GLA+I  +
Sbjct: 320 TDVFKESGFKVFASSELVK-----VMVVPGGAELSRKEIDEYTKFVEIYGSKGLAWIKVK 374

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D         P+ K  +      +R R   + GD  FF AG      +   + R  + +
Sbjct: 375 EDG----EWQSPIVKFFSEAEIATLRERSGCKPGDILFFQAGPADVANAALGNLRCELGK 430

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              +I    F+  WI DFP  EW+ +EK+    H+PFT  +     +   D     A  Y
Sbjct: 431 RFNLIREGEFKPVWITDFPLLEWDPDEKRFVARHHPFTSARPEQMQVLKEDPGQAIARAY 490

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NGFE+  G IR H  E     F+ +GI KE  E +FG L  A + G PPHGGIA G
Sbjct: 491 DIVMNGFEVGGGSIRIHTEEQQEAMFAALGIGKEEAEEKFGFLMNALRYGAPPHGGIAFG 550

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR++M+L G+K++R+V  FP +Q    LL  +PS V  +QLRELG+R+ E  K+
Sbjct: 551 LDRLIMILTGSKSIRDVIAFPKTQKATCLLTEAPSEVPNKQLRELGIRLREKKKE 605


>gi|319896649|ref|YP_004134842.1| aspartyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432151|emb|CBY80502.1| aspartyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 588

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 214/592 (36%), Positives = 330/592 (55%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRIYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++  ++ +    +     F  + + +A+ R+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHDLWLDTIGVD--LGKFPVMTWQEAMCRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVEFKVFNEPANNPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R++ Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPIAKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+         +     A  YD
Sbjct: 418 LGLTRLDEWKPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFTPEQLEVNPTDAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+  
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVKAE 588


>gi|295094219|emb|CBK83310.1| aspartyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 610

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 232/593 (39%), Positives = 343/593 (57%), Gaps = 11/593 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60
            R+H C ++  +++G  V + GWV + R  GGIIF+D+RD  GI QV+         CFE
Sbjct: 9   KRSHRCTEVSSANIGEKVTVMGWVQKSRNKGGIIFVDLRDRSGILQVIFEESQCGAECFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V  I+G V  R A  +N N+ TG IE+ A  + ILS AE  P P+    + 
Sbjct: 69  KAGKLRSEFVAAIEGTVCKR-AGAVNENLATGDIEVVASSLRILSEAETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LDLRR  L +N++ ++++    R  M  E F+E  TP+LT S+PEGARD+
Sbjct: 128 KEEIRLKYRYLDLRRPDLQRNLIMKSKVATIARQFMADEGFLEIETPMLTKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G+FYALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGTFYALPQSPQLFKQLLMCSGYDRYFQIARCFRDEDLRADRQP-EFTQMDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E +L  +F+E  + +       R+ + +A+ R+G+DKPDLR  + + 
Sbjct: 247 LSFVDVDDVIDVNERLLAKLFKEILDLDI-QLPIQRMTWQEAMDRFGSDKPDLRFGLELK 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++     EF VF+  L+            +G    R   D + E+A++ G  GLAYI 
Sbjct: 306 DVSDVVKDCEFGVFTGALANGGTVRGINAEGQG-SMPRKKIDALIEYAKTYGAKGLAYIV 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D     +     AK +      A+   +D + GD   F A       +     R H+
Sbjct: 365 INEDG----SYKSSFAKFMTEEQMNALVAAMDGKPGDLLLFAADKTKIVWTVLGALRCHL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ +G+++ N + F WI +FP  EW++EE +    H+PFTMP         +D   ++A 
Sbjct: 421 AELMGLVDKNVYRFVWITEFPLLEWSDEENRFTAMHHPFTMPMEEDLQYIDSDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H  ++  + F  +G +K     RFG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIHQDDIQEKMFECLGFTKAQAHERFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR+VML+    ++R+V  FP  ++   L+  +P  V  +QL ELG+ +  
Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASCLMTNAPDYVDDKQLAELGIEVTP 593


>gi|226954441|ref|ZP_03824905.1| aspartyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226834790|gb|EEH67173.1| aspartyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 592

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 239/597 (40%), Positives = 343/597 (57%), Gaps = 9/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   FE A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFETAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYPE 122
             RSE+VL I G V  R A T NAN+++GQIE+  ++IE+L+ +E  P P+  E     E
Sbjct: 63  KARSEFVLKITGRVRRRYAGTENANMVSGQIEVLGKEIEVLAASETPPFPLNDENTNISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLD+RR  + + +  R+++ N +R       F++  TPILT ++PEGARD+LV
Sbjct: 123 EIRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYFEDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E  N       F R+ Y DA+R Y +DKPD+R P+ + +V
Sbjct: 242 FMSDDDIMDLMEGLTVKMFDELLNVKFDK--FERMTYADAMRDYASDKPDMRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+       G  V       G   R+  D   ++    G  GLAYI   
Sbjct: 300 ADLMQDVEFKVFAGPAKDPKGRIVALRVPGAGSLPRSAIDEYTKFVGIYGAKGLAYIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G      P+ K +  +  + ++ R+  ++GD  FF A             R  I  
Sbjct: 360 ELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFFGADKAKVVNDAMGALRVKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +     +   W++DFP +E  ++  K    H+PFT+P+  +E +K N      +  Y
Sbjct: 419 DLNLATKE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTLPKSSVEEVKNN-PGEALSVAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG EI  G +R +  E+    F  +GI ++  E +F  L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTEIGGGSLRIYTLEMQKAIFEALGIGEDEAEEKFSFLLNALRYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           +DR++ML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E  KK  
Sbjct: 536 LDRLIMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQAKKEA 592


>gi|170726921|ref|YP_001760947.1| aspartyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|238688666|sp|B1KHG7|SYD_SHEWM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169812268|gb|ACA86852.1| aspartyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 595

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 216/593 (36%), Positives = 332/593 (55%), Gaps = 6/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CGD+  S VG  V L GWV+R R  GG++FLD+RD  GI QVV +PD    F++A 
Sbjct: 2   RSQYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+ + + GLV +R    +N ++ TG IE+  + + IL+ +  LP+ +   +   E 
Sbjct: 62  TLRSEFCVQVTGLVRARPDSQVNQDMRTGGIEILGKGLTILNSSAPLPINMDKNQHNTEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   IV R+++ +++R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMADRIVFRSKVTSAVRRFLDDSGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F +  N +     F ++ + +A+RR+G+DKPDLRNP+ + ++ 
Sbjct: 241 MSSEQVMAKTEEMVRGLFNDLLNVDLGE--FPKMTFAEAMRRFGSDKPDLRNPLELIDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DIVKEVEFAVFNGPANDPEGRVAVLSIPGGAKLSRKQLDEYAKYVTIYGAKGLAWMKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G      PV K L+    +A+  R   Q GD   F A             R    ++
Sbjct: 359 LDQGMEGIQSPVLKFLSEDVVKALLDRTGAQTGDLILFGADKANIVAEAMGALRLKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    ++  W++DFP +E   +   +   H+PFT P G        D  +  +  YD
Sbjct: 419 FDLLQ-GEWKPLWVVDFPMFERTSD-GGLHAMHHPFTAPTGISPEQLEADPTAAISDAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H SE+    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVLNGCELGGGSVRIHNSEMQSAVFRILGIEEEEANEKFGFLLEALRYGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DRI+ML+ GA ++R+V  FP +      L  +P   +  QL ELG+ ++EN +
Sbjct: 537 DRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPAQLIELGIEVIENQE 589


>gi|242373929|ref|ZP_04819503.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348483|gb|EES40085.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 588

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 233/592 (39%), Positives = 341/592 (57%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD      ++
Sbjct: 3   KRTTYCGLVTEELLNEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEALKV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ ++G+V  R AET+N  I TGQ+E+    IEI++ +E             
Sbjct: 63  AETVRSEYVVEVEGVVTKRDAETVNPKIKTGQVEVQVSNIEIINKSETPPFAINEENVNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDDNGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D+++  E +LR V ++    + V   F R+ Y +A+ RYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVISMGEEMLRKVVKDVKGID-VPAPFPRMTYAEAMDRYGSDKPDTRFDMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV++     +F+VF   +  +   +            R   D + E+    G  GLA++ 
Sbjct: 301 NVSQLGKDMDFKVFKDTVENDGEIKAIVAEGAADKYTRKDMDALTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+A+     N E ++     + GD   F+A  P          R  +
Sbjct: 361 VVED-----GLSGPIARFFEDANVETLKELTGAKPGDLVMFVADKPSVVAQSLGALRIKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+ +   F W+ D+P  E++E+ K+   AH+PFT P+    +   ++  + +A 
Sbjct: 416 AKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKQEDIAKLDSEPENAQAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G S E  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHNGELQQKMFEVLGFSAEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL+EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGQVSDKQLQELSLRIR 587


>gi|238685529|sp|A3M8Q6|SYD_ACIBT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|193078326|gb|ABO13300.2| aspartyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 592

 Score =  622 bits (1603), Expect = e-176,   Method: Composition-based stats.
 Identities = 233/597 (39%), Positives = 337/597 (56%), Gaps = 9/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R   T N N+++GQIE+  ++IE+L+ +E  P P+  +     E
Sbjct: 63  KARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLD+RR  + + +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EHRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F +          F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLNDDDIMDLMEGMTIKLFNDLLGVKFEK--FRRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+       G          G   R+  D   ++    G  GLAYI   
Sbjct: 300 ADLMQEVEFKVFAGPAKDPKGRIAALRVPGAGSLTRSQIDEYTKFVGIYGAKGLAYIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G      P+ K +  +  + +  R+  ++GD  FF A             R  I  
Sbjct: 360 EIEKGIEGLQSPIVKFIEPIVMQ-LLERVGAENGDIVFFGADKAKIVNDAMGALRVKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +  C  +   W++DFP +E  ++  K    H+PFT+P+  +E +K ++     +  Y
Sbjct: 419 DLNLATCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTLPKSSVEDVK-SNPGEALSVAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           +DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E  KK  
Sbjct: 536 LDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQQKKEA 592


>gi|294651458|ref|ZP_06728771.1| aspartate--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822608|gb|EFF81498.1| aspartate--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 592

 Score =  621 bits (1602), Expect = e-176,   Method: Composition-based stats.
 Identities = 240/597 (40%), Positives = 343/597 (57%), Gaps = 9/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   FE A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFETAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYPE 122
             RSE+VL I G V  R A T NAN+++GQIE+  ++IE+L+ +E  P P+  E     E
Sbjct: 63  KARSEFVLKITGRVRRRYAGTENANMVSGQIEVLGKEIEVLAASETPPFPLNDENTNISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLD+RR  + + +  R+++ N +R       F++  TPILT ++PEGARD+LV
Sbjct: 123 EIRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYFEDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E  N       F R+ Y DA+R Y +DKPD+R P+ + +V
Sbjct: 242 FMSDDDIMDLMEGLTVKMFDELLNVKFDK--FERMTYADAMRDYASDKPDMRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+       G  V       G   R+  D   ++    G  GLAYI   
Sbjct: 300 ADLMQDVEFKVFAGPAKDPKGRIVALRVPGAGSLPRSAIDEYTKFVGIYGAKGLAYIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G      P+ K +  +  + ++ R+  ++GD  FF A             R  I  
Sbjct: 360 ELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFFGADKAKVVNDAMGALRVKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +     +   W++DFP +E  ++  K    H+PFT+P+  +E +K N      +  Y
Sbjct: 419 DLNLATKE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTLPKSSVEEVKNN-PGEALSVAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG EI  G +R +  E+    F  +GI +E  E +F  L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTEIGGGSLRIYTLEMQKAIFEALGIGEEEAEEKFSFLLNALRYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           +DR++ML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E  KK  
Sbjct: 536 LDRLIMLMTGASSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQAKKEA 592


>gi|54297389|ref|YP_123758.1| aspartyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|62287532|sp|Q5X586|SYD_LEGPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|53751174|emb|CAH12585.1| Aspartyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 593

 Score =  621 bits (1602), Expect = e-176,   Method: Composition-based stats.
 Identities = 227/590 (38%), Positives = 334/590 (56%), Gaps = 4/590 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH C  +    +   + + GWVH  R HGG+IFLDIRD  G+ QVV  P+    F IA+
Sbjct: 2   RTHYCSAVNELSLDKQITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+V+ + G+V  R    IN  + TG++E+   ++EIL+ +   P      +   E 
Sbjct: 62  KLRSEFVVRVTGIVRKRPEGMINDKMETGRVEVIGIQLEILNQSPTPPFLPDDHQIINED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R+KYR++DLRR  + K +  R ++ + +R  +  +NF++  TP+LT ++PEGARD+LVP
Sbjct: 122 LRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF QLD+EM+F
Sbjct: 182 SRVHPGQFYALPQSPQLFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DIL  +E +L+ VF+E  N         R+ Y +A+ RYG+DKPDLRNP+ + ++ 
Sbjct: 241 INEEDILQLIEGLLKVVFKEILNITLPDKL-PRMSYKEAMTRYGSDKPDLRNPLELIDIA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F VF+   + N G  V      G   +R   D   ++    G  GLAYI    
Sbjct: 300 DLVKDCDFNVFASAANDNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVND 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K L+    ++I  R++ Q GD  FF A             RN +  +
Sbjct: 360 LSAGMAGLQSPILKFLSETAVQSILNRVEAQTGDVIFFGADKAHVVNESMGALRNKLGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             +IN   ++  W++D+P +E + +  K+   H+PFT PQ        +      A  YD
Sbjct: 420 RNLINPG-WQLLWVIDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTLAKAYD 478

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+EI  G IR H  E+    F  +GI ++    +FG L  A Q G PPHGGIA GI
Sbjct: 479 IVINGYEIGGGSIRIHQPELQKTVFDLIGIDEQEAHEKFGFLLDALQYGAPPHGGIALGI 538

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           DR+ MLL  + ++R+V  FP +Q     L  +PS     QL ELG+R+  
Sbjct: 539 DRLAMLLTDSTSIRDVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLAP 588


>gi|332525588|ref|ZP_08401743.1| aspartyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332109153|gb|EGJ10076.1| aspartyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 595

 Score =  621 bits (1602), Expect = e-176,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 336/595 (56%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +  + +   V L GW HR R HGG+IF+D+RD  G+ Q+V +PD    F+ A+
Sbjct: 2   RTTYCGLVSETLMDQTVTLMGWAHRRRDHGGVIFIDLRDREGLVQIVCDPDRPEMFKAAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L + G V +R A T N N+ +G+IE+ A ++E+L+ +   P  +  +    E+
Sbjct: 62  GVRNEFCLKVVGKVRARPAGTENTNLTSGKIEVLAYELEVLNPSVTPPFQLDDDNLS-ET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R  +R LDLRR T+ KN++ R R+   +R  +  + F++  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTHRVLDLRRPTMQKNLMLRYRVAMEVRKYLDEQGFVDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHDGMFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++ I    E ++R VF            + R+ Y +A+ RYG+DKPDLR  +    +T
Sbjct: 240 LGEEQIREITEGMVRRVFRNALGVELPV--YERLTYAEAMHRYGSDKPDLRVKLEFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF+   ++  G         G   +R+  D   E+ +  G  GLA+I    
Sbjct: 298 DVMKTVDFKVFAGPATMKGGRVAALRIPGGAEMSRSEIDAYTEFVKIYGAKGLAWIKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ- 422
              G      P+ K+L+    E I  R     GD  FF A             R  I   
Sbjct: 358 LAKGREGLQSPIVKNLHDAALEEILKRTGAAAGDLIFFGADKRKVVDDALGALRVKIGHS 417

Query: 423 ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           E G  +    + +   W++DFP +E ++E  + +  H+PFT P+ G E L   D  +  A
Sbjct: 418 EFGRTHGLFEDKWAPLWVVDFPMFEHDDEAGRWNAVHHPFTAPKDGHEDLMDTDPGACVA 477

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R H +EV  + F  + IS E  + +FG L  A Q G PPHGG+
Sbjct: 478 KAYDMVLNGWELGGGSVRIHRAEVQSKVFKALNISAEDAKVKFGFLLDALQYGAPPHGGL 537

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR+V L+  A+++R+V  FP +Q    LL G+PS V   QLREL +R+   
Sbjct: 538 AFGLDRLVTLMTKAESIRDVIAFPKTQRAQCLLTGAPSNVDEAQLRELHIRLRNP 592


>gi|210623813|ref|ZP_03294062.1| hypothetical protein CLOHIR_02013 [Clostridium hiranonis DSM 13275]
 gi|210153308|gb|EEA84314.1| hypothetical protein CLOHIR_02013 [Clostridium hiranonis DSM 13275]
          Length = 604

 Score =  621 bits (1602), Expect = e-176,   Method: Composition-based stats.
 Identities = 220/598 (36%), Positives = 336/598 (56%), Gaps = 14/598 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEI 61
            R+  CG+L   ++G  V L GWV + R  GG++F+D+RD  GI Q+V +   D   FE 
Sbjct: 15  KRSCYCGELRAENIGQEVVLMGWVQKKRNLGGLVFVDLRDRGGICQIVFDTDVDKEAFEK 74

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ + SE+V+ + G V  R ++  N N+ TG +E+ A ++ +L+ +E  P+ +  + +  
Sbjct: 75  AEKLGSEYVIAVKGEVRERQSK--NPNMPTGDVEVFANELRLLNKSETPPIYIKDDDDVS 132

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLR+  + +N++ R ++ N +R  +  +NF E  TP L   +PEGARD+L
Sbjct: 133 EALRLKYRYLDLRKPKMQRNLMLRQQVTNIVRRYLTEQNFCEIETPFLVKPTPEGARDYL 192

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ  KQLLM SG DRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 193 VPSRVNEGKFYALPQSPQLLKQLLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDTEM 251

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE +D++  ME +++ +F+E  N +       R+ Y +A+ RYG+DKPD R      N
Sbjct: 252 SFVEAEDVMTIMEKMVQEIFKETINVDI-ELPLPRMTYAEAMDRYGSDKPDTRFGYEFVN 310

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+      F+VF+             +        R     + + A++    GLA++  
Sbjct: 311 ITDLVEGCGFKVFADCAEKGKSVRGINVEGMAEKFPRKQISHLEDCAKTYKAKGLAWMKI 370

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                       P+AK  +  +  AI  R++ + GD   F+A             R  +A
Sbjct: 371 T-----EEGVTSPIAKFFSEEDLNAIVERMNGKVGDLLLFVADKDAIVYDALGQVRLAVA 425

Query: 422 QELGII--NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL-LSIK 478
           ++LGI+    N F F W+ +FP +E +EE  +    H+PFT P          D   +++
Sbjct: 426 EKLGILEEKKNQFNFLWVTEFPLFEEDEENGRYVAKHHPFTSPLDEDIDRLDTDEKDTLR 485

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R   SEV  + F+ +G+S+E   N+FG L  AF+ G PPH G
Sbjct: 486 AKAYDIVLNGYEVGGGSVRISDSEVQKKMFAALGLSEEEAYNKFGFLLDAFKYGAPPHAG 545

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G+DR+VMLL G  N+REV  FP +QN    +  +P+     QL EL +++    +
Sbjct: 546 MAFGLDRLVMLLAGVDNIREVIAFPKNQNAICPMTNAPAPAEDAQLEELSIKVDIKEE 603


>gi|73540145|ref|YP_294665.1| aspartyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|97196830|sp|Q475W2|SYD_RALEJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|72117558|gb|AAZ59821.1| aspartyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 602

 Score =  621 bits (1602), Expect = e-176,   Method: Composition-based stats.
 Identities = 223/602 (37%), Positives = 335/602 (55%), Gaps = 8/602 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CF 59
           M   RTH CG +     G  V L+GWV R R HGG+IF+D+RD  G+ QVV +PD    F
Sbjct: 1   MSSMRTHYCGLVTEQLSGQEVALTGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A+ +R+E+ + I G V  R A T N N+ +G+IE+   ++ +L+ +   P  +  +  
Sbjct: 61  KAAEEIRNEYCIRITGKVRPRPAGTENTNLTSGKIEVLCYELTVLNPSVTPPFQLDDDNL 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+ R  +R LDLRR  +  N+  R ++   +R  + A+ FI+  TP+L  S+PEGARD
Sbjct: 121 S-ETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDAQGFIDIETPMLGKSTPEGARD 179

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D 
Sbjct: 180 YLVPSRVNPGHFFALPQSPQIFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDC 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E+++R VF+   + + +   F  + + +A+ R+G+DKPDLR  +  
Sbjct: 239 ETSFLTEQEIRDLFEDMMRTVFKNAIDVD-LDAKFPVMEFREAMARFGSDKPDLRVKLEF 297

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +T+     +F+VFS   + + G  V      GG  +R   D   ++    G  GLA++
Sbjct: 298 TELTDVMKDVDFKVFSGPANSDNGRVVGLRVPGGGAISRGEIDAYTQFVGIYGAKGLAWV 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G      P+ K+L+      I  R   QDGD  FF A             R  
Sbjct: 358 KVNEVAKGRDGLQSPIVKNLHDAAITEILKRTGAQDGDIIFFGADKAKVVNDAIGALRLK 417

Query: 420 IAQ-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           I   E G  +    + ++  W++DFP +E++EE+ +    H+PFT P+         D  
Sbjct: 418 IGHSEFGKASGLFEDVWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHMQYLETDPG 477

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              A  YD+V NG+E+  G +R + S++  + F  + I+ E    +FG L  A Q G PP
Sbjct: 478 KCIAKAYDMVLNGWEMGGGSVRIYRSDIQSKVFRALKINDEEARAKFGYLLDALQYGAPP 537

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGG+A G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+    
Sbjct: 538 HGGLAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSAVDEKQLRELHIRLRATE 597

Query: 596 KK 597
            K
Sbjct: 598 PK 599


>gi|91228187|ref|ZP_01262169.1| aspartyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|269967682|ref|ZP_06181732.1| aspartyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|91188176|gb|EAS74477.1| aspartyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|269827769|gb|EEZ82053.1| aspartyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 592

 Score =  621 bits (1602), Expect = e-175,   Method: Composition-based stats.
 Identities = 221/597 (37%), Positives = 335/597 (56%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R     N ++ TG++E+ A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPESQANKDMATGEVEILAKGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +  T E ++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVRATTEKMVREMWQELLNVDLGE--FPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   E+    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVIRVPGGASLTRKQIDGYGEFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN      I  R   + GD   F A             R  + ++
Sbjct: 357 RAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKAGIVAEAMGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E + +E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LELTDESAWAPLWVVDFPMFEED-DEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +++    F  +GI+ E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNADMQEAVFDILGITPEEQQLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K  +
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSIANPAALEELAIAVTAAKEKDAE 592


>gi|224541604|ref|ZP_03682143.1| hypothetical protein CATMIT_00775 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525474|gb|EEF94579.1| hypothetical protein CATMIT_00775 [Catenibacterium mitsuokai DSM
           15897]
          Length = 594

 Score =  621 bits (1602), Expect = e-175,   Method: Composition-based stats.
 Identities = 223/601 (37%), Positives = 348/601 (57%), Gaps = 12/601 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+  RTH+ G+L ++DV   V L GWV + R  G ++F+D+RD +GITQV+ +      E
Sbjct: 5   MNMNRTHNNGELRITDVNKKVELIGWVAKKRNLGALVFVDLRDRHGITQVIFDESFN--E 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K V++E++L I G V+ RS++  N ++ TG IE+ A++++I++ A   P+ +  E + 
Sbjct: 63  QLKDVKNEYILDIKGTVVERSSK--NPDMPTGDIEIQAEEVKIVNKAATTPMIIADETDA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR  L KNI++R +I+ ++   + +E F+E  TP L  S+PEGARDF
Sbjct: 121 LEETRMKYRYLDLRRPALQKNIMRRAKIVRAIHEYLDSEEFVEIETPYLNKSTPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFYALPQ+PQ +KQLLM +GF+RY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRVHNGSFYALPQSPQLFKQLLMVAGFERYYQIARCFRDEDLRADRQP-EFTQVDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+  D ++   E +++ V ++  N + V   F R+ + DA+  YG DKPD R  + + 
Sbjct: 240 MSFMNTDQVIGIGEGLIKKVMKDVMNID-VQLPFPRMTWHDAMETYGIDKPDTRFDLKLV 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           N+ E     +F VF   L      +   +  +    +R   D + E A+     GLA++ 
Sbjct: 299 NLNETVKDVDFVVFKSALEAGGHVKGLNVKGEADNYSRKKIDALTELAKKYKAKGLAWLK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADARNH 419
                       GP+AK        A+  +++ + GD   F++       C   A  RNH
Sbjct: 359 VTDK-----GVSGPIAKFFTEEQMSALLEKMNAEVGDLLLFVSDTHYMVVCDALAAIRNH 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +EL + +   F F W++DFP +E++EE+ +    H+PFT P+         D  +  A
Sbjct: 414 LGKELKLYDPRQFNFLWVVDFPMFEYSEEDGRYYAMHHPFTRPKDSDLDKIDTDPANCLA 473

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NGFE+  G  R +  E+  +AF  +G ++E ++ +FG    AF+ G PPH G 
Sbjct: 474 DAYDIVLNGFELGGGSQRIYEEELQDRAFKALGFTQERIDAQFGWFVDAFRYGAPPHAGF 533

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           A G+DR  MLL G  ++R+V  FP + +    +  +P+ V  +QL++LG+ + E   +  
Sbjct: 534 ALGLDRFAMLLCGCDSLRDVIAFPKNTSATCPMSKAPTPVDNDQLKDLGIEVTEYESEEN 593

Query: 600 K 600
           K
Sbjct: 594 K 594


>gi|329769593|ref|ZP_08260998.1| aspartyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328838545|gb|EGF88152.1| aspartyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 590

 Score =  621 bits (1602), Expect = e-175,   Method: Composition-based stats.
 Identities = 220/597 (36%), Positives = 343/597 (57%), Gaps = 10/597 (1%)

Query: 1   MHRY-RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSA 57
           M  Y RT   G +    +G  V + GWV + R  G +IF+D+RD  GI Q V     ++ 
Sbjct: 1   MSAYGRTEYAGHIDEKYIGKRVTVKGWVSKRRDLGNLIFIDVRDRMGIVQCVFSGEKNTE 60

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+A ++R+E+V+ I+G V++RS  T+N  I +G++E+ A K+EILS A+ LP  +   
Sbjct: 61  IHELASTIRNEFVVSIEGEVVARSENTVNDKIPSGKVEIIADKLEILSKAKTLPFVLDDA 120

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R KYR+LDLRR  L + +  R++I  + R  +    F++  TPILT S+PEGA
Sbjct: 121 SLSSEELRLKYRYLDLRRTELAEVLQLRSKITKATRDYLDNNMFVDVETPILTKSTPEGA 180

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV+ G FYALPQ+PQ +KQLLM +GFDRY+Q+A CFRDED R+DR P +F Q+
Sbjct: 181 RDYLVPSRVHPGEFYALPQSPQLFKQLLMVAGFDRYYQVARCFRDEDLRADRQP-DFTQI 239

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF+ Q++IL  +E ++  V +E    + V   F R+ Y++A+ R+G+DKPD R  +
Sbjct: 240 DMEMSFMSQEEILTMIEGLIAHVMKEVKGID-VVLPFPRLDYEEAMERFGSDKPDTRFDM 298

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + +V++   + +F+VFS  +      +           +R   D + ++  + G  GLA
Sbjct: 299 ELKDVSDLVKNLDFKVFSNAVEQGGAVKCIVAKGCADKYSRKDIDALGKYVANYGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++             G +AK       + +  R+D + GD   F A       +     R
Sbjct: 359 WVKVT-----EEGLNGAIAKFFTDEVAQELVTRVDAEVGDIILFAADTKKVCYASLGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A +L +I+ + + + W++++P  E++EE+ +   AH+PFTMP+     L        
Sbjct: 414 QKLAADLDLIDKDKYNYLWVVNWPLLEYDEEKGRYSAAHHPFTMPKEEDVELLETAPEKA 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+E+  G IR +  E+    F  +G ++E  + +FG L  AF+ G+PPHG
Sbjct: 474 YAQAYDIVLNGYELGGGSIRIYDKEIQSSMFKALGFTEEQAQEQFGFLLDAFEYGVPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G A G+DR VMLL G  N+R+   FP + N  D +  +PS V +EQL EL + ++  
Sbjct: 534 GCALGLDRFVMLLAGRDNLRDTIAFPKTANAADPMTQAPSPVDLEQLLELNISLLRK 590


>gi|304321254|ref|YP_003854897.1| aspartyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303300156|gb|ADM09755.1| aspartyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 640

 Score =  621 bits (1602), Expect = e-175,   Method: Composition-based stats.
 Identities = 317/608 (52%), Positives = 431/608 (70%), Gaps = 17/608 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M  YRTH+CG L   DVGS V LSGWVHR R HGG++F+D+RDH+G+TQ+V  P++  F 
Sbjct: 39  MTPYRTHTCGALRKGDVGSNVTLSGWVHRKRDHGGLLFIDLRDHHGLTQLVIEPEAPFFA 98

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             ++VR+E V+ ++G V++R  E +N ++ TG+IE+   + E+LS A +LPLPVFGE +Y
Sbjct: 99  EVEAVRAESVISVEGEVIARGDEVVNPSLPTGEIEIRLSRFEVLSAAGDLPLPVFGEPDY 158

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE IR ++R+LDLRR+T+HKNIV R+R+I+ +R  M    F E  TPILTASSPEGARDF
Sbjct: 159 PEDIRMRHRYLDLRRETMHKNIVLRSRVISQLRKGMEQREFTEYQTPILTASSPEGARDF 218

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G F+ALPQAPQ +KQL+M SGFDRYFQIAPCFRDED R+DR  GEFYQLD+E
Sbjct: 219 LVPSRLHPGKFFALPQAPQIFKQLIMVSGFDRYFQIAPCFRDEDARADRSAGEFYQLDLE 278

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIRRYGTDKPDLRNP-- 296
           MSFVEQ D+ +    V+   F  F+    V     + +I Y +++ +YG DKPDLR P  
Sbjct: 279 MSFVEQQDVFDATAPVIHEAFALFAGDRRVDPYKEWPQIPYAESLLKYGNDKPDLRLPSS 338

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           + M  VTEHF  S F++F+ I   +P  ++ AIPA GGG +RAFCDRMN WA+ +G PG+
Sbjct: 339 LDMQVVTEHFKGSGFKIFASIAE-DPEQQIRAIPAPGGG-SRAFCDRMNSWAQKEGLPGM 396

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            YI +  +  G     GPVAK++    T AI+ +L +  GD+ FF+AG    F + A  A
Sbjct: 397 GYIMF-DEADGK----GPVAKNIGPERTAAIKAQLGLGAGDAAFFVAGKVESFEAIAGRA 451

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----N 472
           R  I +ELG ++ + F F WI+DFP YEW+EE KK++F HNPF+MP+GG+ +L+      
Sbjct: 452 RVQIGRELGHLDEDRFAFAWIVDFPMYEWDEENKKVEFGHNPFSMPKGGLSALEKATTPE 511

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
             L++KA QYDLVCNG+E+ SG IRNH+ EVM +AF+  G   +VVE++FGG+  AF+ G
Sbjct: 512 AQLALKANQYDLVCNGYELGSGAIRNHLPEVMYRAFAIAGYGADVVEDKFGGMLNAFRYG 571

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG A G+DRIVMLL G +N+REV++FP++QN  D L+G+P+  S EQL+EL +R+ 
Sbjct: 572 APPHGGAAFGVDRIVMLLAGVENIREVTMFPLTQNAEDYLLGAPAEASAEQLKELHIRLA 631

Query: 593 EN--PKKI 598
           +    KK+
Sbjct: 632 KPIAEKKV 639


>gi|299535680|ref|ZP_07049001.1| aspartyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298728880|gb|EFI69434.1| aspartyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 589

 Score =  621 bits (1602), Expect = e-175,   Method: Composition-based stats.
 Identities = 225/593 (37%), Positives = 346/593 (58%), Gaps = 8/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH+  +L  +  G  V L GWV R R  GG+IF+D+RD  GITQVV +PD +    +A 
Sbjct: 4   RTHASNELSEALQGEKVVLKGWVQRRRDLGGLIFIDLRDRTGITQVVFSPDVAEAHALAD 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ ++G V+ R+ + IN N+  G+IE+ A K+ +++ A+  P  +    +  E 
Sbjct: 64  KVRSEYVIEVEGTVILRTEDQINPNVPNGKIEVEATKLVVINTAKTTPFQIEDRTDVSED 123

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  +      R+ +  ++R  +  E F+E  TPILT S+PEGARD+LVP
Sbjct: 124 LRLKYRYLDLRRPVMFDTFKMRSDVTRTIRNFLQNEGFLEVETPILTKSTPEGARDYLVP 183

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM +GF++YFQIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 184 SRVHEGEFYALPQSPQLFKQLLMVAGFEKYFQIARCFRDEDLRADRQP-EFTQVDIETSF 242

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + Q+++L   E +++ V +E    +     F R+ Y +A+ RYG+DKPD+R  + +  + 
Sbjct: 243 LTQEEVLEMNERLIQAVMKEVKGIDI-PAPFQRMKYQEAMDRYGSDKPDVRFGLELVALN 301

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           + F    F+VF+  ++     +   I       +R   D + ++    G  GLA++    
Sbjct: 302 DIFEGCNFKVFADTVAQGKQVKSINIKGAADKYSRKDMDELTKFVGIYGAKGLAWLKVT- 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
                    GP+AK  +     A+  R+  + GD   F+A       +     R  + Q+
Sbjct: 361 ----EEGLNGPIAKFFDEALAAALIERMGAEVGDILVFVADKAAVVAASLGALRTKLGQD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +I+ + F F WI D+P +E++EE+ +   AH+PFT P     +L   D  +++A  YD
Sbjct: 417 LNLIDESQFAFLWITDWPLFEYSEEDGRYYAAHHPFTRPFDEDIALMDTDPAAVRAQAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R +  ++  + F  +G S+E  + +FG L  AF+ G+PPH G+A G+
Sbjct: 477 IVLNGYELGGGSLRIYERDLQEKMFELLGFSEEEAQAQFGFLLEAFEYGVPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR VMLL G  N+R+   FP + +   L+  +PS VS EQL EL L I    K
Sbjct: 537 DRFVMLLAGRTNLRDTIAFPKTASASCLMTEAPSEVSPEQLSELSLAIKPFRK 589


>gi|113475986|ref|YP_722047.1| aspartyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|123056664|sp|Q112K0|SYD_TRIEI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110167034|gb|ABG51574.1| aspartyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 595

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 233/601 (38%), Positives = 357/601 (59%), Gaps = 17/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG +  +++   V L GWV R R HGG+IFLD+RD  G+ Q+V++P+     ++IA
Sbjct: 2   RTHYCGQVNSNNIEETVNLCGWVDRRRDHGGVIFLDLRDRSGLIQIVSDPERTPDSYQIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
             +R+E+V+ I G V  R  E++N  + TG+IE+ A  I++L+         +       
Sbjct: 62  GDIRNEYVVQITGRVSRRPEESLNPKLPTGEIEIYADDIQLLNGLGKQLPFQVSTAETEA 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRR+ + +N++ R  +I ++R  +   +NF+E  TPILT S+PEGAR
Sbjct: 122 VREELRLKYRYLDLRRERMTRNLLLRHEVIKAIRRFLEDEQNFVEIETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV+ G ++ALPQ+PQ +KQ+LM SGFDRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVHPGEWFALPQSPQLFKQILMVSGFDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ Q++IL   E ++  +F++    + +   F R+ Y +A+ RYG+DKPD+R  + 
Sbjct: 241 MEMSFMSQEEILQLNEKLVAYIFQKVKGID-LPLPFPRLTYTEAMERYGSDKPDVRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V++    S F+VFS  ++     +V  IP      +         + + A   G  G
Sbjct: 300 LVDVSDLMKDSGFKVFSGAIAKGGIVKVLPIPGGNDAISNVRIKPGGDLFKEASEVGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAY+  R+ E G +  +G +  +L     + +  R + Q G    F A D          
Sbjct: 360 LAYV--RVKEGGKIDTIGAIKDNLTDEQKQELLKRTNAQPGHLLLFAADDANTVNKTLDR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  I ++LG+I+ +     W+ DFP +EWNE+E++++  H+PFT P         NDL 
Sbjct: 418 LRLVIGEQLGLIDQDKISLLWVTDFPMFEWNEDEQRLEALHHPFTAPHPDDI----NDLK 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NG+E+  G +R +  +V  + F  +G+S +  +N+FG L  AF+ G PP
Sbjct: 474 TARAQAYDLVFNGYEVGGGSLRIYQRDVQEKVFEAIGLSAQEADNKFGFLLEAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL   +++R+V  FP +Q    LL  +PS V  +QL+EL +  +   
Sbjct: 534 HGGIAYGLDRLVMLLAVEESIRDVIAFPKTQQAKCLLANAPSEVDKKQLKELHVSSISKA 593

Query: 596 K 596
           K
Sbjct: 594 K 594


>gi|86606337|ref|YP_475100.1| aspartyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|97196955|sp|Q2JTZ2|SYD_SYNJA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|86554879|gb|ABC99837.1| aspartyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 601

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 240/600 (40%), Positives = 349/600 (58%), Gaps = 18/600 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R+  CG +  + +G  V L GW+ R R HGG+IFLD+RD  GI Q+VA+P      +E+A
Sbjct: 10  RSLYCGQVRPAHIGQTVTLYGWIDRRRDHGGVIFLDLRDRSGIVQLVADPQKTPLSYELA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
             VRSE+V+ + G V  R +++ N  + TG++E+ A+++EILS         +      E
Sbjct: 70  GQVRSEYVVRVTGTVHQRPSDSFNPRLATGEVEVYAEELEILSRVGKQLPFSVSGEEGEE 129

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E IR +YR+LDLRR+ L +N+  R ++I ++R  +   E FIE  TPILT S+PEGAR
Sbjct: 130 VREEIRLRYRYLDLRRERLSRNLQLRHQVIKAIRRFLEDEEGFIEVETPILTRSTPEGAR 189

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G ++ALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 190 DYLVPSRVNPGEWFALPQSPQLFKQLLMVAGVDRYYQIARCFRDEDLRADRQP-EFTQLD 248

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF++Q+ IL   E +L  +F+     + +   F R+ Y +A+ RYG+DKPD R  + 
Sbjct: 249 MEMSFMDQEAILELNERLLCHIFKTVKGID-LPRPFPRLTYAEAMARYGSDKPDTRFGLE 307

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V+  F  S F+VF+K L      +V  +P      +         + +     G  G
Sbjct: 308 LVDVSPLFQGSGFKVFAKALQEGGVIKVLPVPGGDEKISNTRIKPGGDLFKLVTQYGAGG 367

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LA+I  R    G++  +G + + L+    + +    + + GD   F AG           
Sbjct: 368 LAFIRVRP---GSLDTIGALKESLSPEQEQQLLQLTNAKPGDLLLFGAGPAAVVNESLGR 424

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R H+ QELG+I  N     WI DFP +E+N EE +++  H+PFT P     +    DL 
Sbjct: 425 LRLHLGQELGLIPENALNLLWITDFPLFEFNAEENRLEALHHPFTAPHPDDLA----DLK 480

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NG E+  G +R +  E+  Q F  +G++ E   ++FG L  AF+ G PP
Sbjct: 481 TARAQAYDLVWNGVEVGGGSLRIYQREIQEQVFQTIGLTPEQARDKFGFLLEAFEYGTPP 540

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL G  ++R+V  FP +Q    LL G+PS V  +QL+EL +     P
Sbjct: 541 HGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQARCLLTGAPSGVEAKQLKELHVASTYQP 600


>gi|303250101|ref|ZP_07336303.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307252787|ref|ZP_07534678.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|302651164|gb|EFL81318.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306859819|gb|EFM91841.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 591

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 217/593 (36%), Positives = 336/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S V   V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+IA 
Sbjct: 3   RSHYCGALNRSHVDQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKIAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE  + I G V++R    IN  + TG+IE+  + + + + A+   LP+   +   E 
Sbjct: 63  SLRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNVVVYNNAD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHNGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   MEN++ G++ +  N +     F  + + +A++R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAEEVRELMENMIHGLWLDRLNVD--LGKFPIMTWQEAMQRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DILKDVEFKVFNEPANSADGRVTVLRVPNGASLTRKQIDEYTQFVGIYGAKGLAWAKIND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN    +A+  R +   GD  FF A             R  + ++
Sbjct: 358 VNAGMEGIQSPVAKFLNEEVFKALIERTNATSGDILFFGADKWQVVTDSMGALRLKVGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + ++  W++DFP +E + +E  +   H+PFT P+         + ++  A  YD
Sbjct: 418 LALTDLSAWKPLWVIDFPMFEKD-DEGNLSAMHHPFTSPKNLTPEELAANPVNAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R +  ++    F  +GI+++  + +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIYDPKMQQTVFGILGINEQDQQEKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L ELG+ +++  K
Sbjct: 537 DRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELGIAVLKKEK 589


>gi|302387916|ref|YP_003823738.1| aspartyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302198544|gb|ADL06115.1| aspartyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 640

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 228/596 (38%), Positives = 352/596 (59%), Gaps = 11/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
            R+H C ++   +VGS V + GWV + R  GGIIF+D+RD  GI Q++    +     F 
Sbjct: 53  KRSHRCTEVTKDNVGSEVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEESNCGAESFA 112

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ + G V SR A  +N N+ TG+IE+ A+ + ILS +E  P P+    + 
Sbjct: 113 KAEKLRSEFVIAVAGEVESR-AGGVNENLATGEIEVRAKSLRILSESETPPFPIEENSKT 171

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + +NI  R+++    R  +  E F+E  TP L  S+PEGARD+
Sbjct: 172 KEELRLKYRYLDLRRPDIQRNIRVRSQVATLTRAFLAEEGFLEIETPTLIKSTPEGARDY 231

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFYALPQ+PQ YKQLLM SG+DRYFQ+A C+RDED R+DR P EF Q+DME
Sbjct: 232 LVPSRVHPGSFYALPQSPQLYKQLLMCSGYDRYFQLARCYRDEDLRADRQP-EFTQIDME 290

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ +D+L   E +L+ +F+E  N +       R+ + +A+ R+G+DKPD+R  + + 
Sbjct: 291 LSFVDVEDVLEVNERLLKKLFKEICNLDI-ELPLTRMTWREAMDRFGSDKPDMRFGMELK 349

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV++    +EF VF   L             +G    R   D + E+A+  G  GLAY+ 
Sbjct: 350 NVSQVVKDTEFAVFKSALENGGSVRGINAEGQG-AMPRKKIDALVEYAKGFGAKGLAYLA 408

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             ++E G        AK +       +   +  + GD   F A           + R  +
Sbjct: 409 --VNEDGTYKC--SFAKFMTEEELHTLAEAMGAKPGDLLLFAADRDKVVFDVLGNLRLEL 464

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L ++  + F+F W+ +FP  E++EE+ +    H+PFTMP     +L   D  +++A 
Sbjct: 465 ARQLDLLKKDHFKFLWVTEFPLLEYSEEQGRFTAMHHPFTMPMDEDWALIDRDPGAVRAK 524

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H S++  + F  +G +KE  +++FG L  AF+ G+PPH G+A
Sbjct: 525 AYDIVLNGTELGGGSVRIHQSDIQSKMFEVLGFTKEQAKDQFGFLLDAFKYGVPPHAGLA 584

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VML++GA ++R+V  FP  ++   L+  +P+ V  +QL ELG+ I +  +
Sbjct: 585 YGLDRVVMLMVGADSIRDVIAFPKVKDASCLMTEAPAQVDTKQLVELGIEISDEKE 640


>gi|319775815|ref|YP_004138303.1| aspartyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|317450406|emb|CBY86622.1| aspartyl-tRNA synthetase [Haemophilus influenzae F3047]
          Length = 588

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 215/592 (36%), Positives = 331/592 (55%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELCIYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++  ++ +    +     F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHDLWLDTIGVD--LGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVDFKVFNEPANNPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K LN    +A+  R++ Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPITKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFSPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+  
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVKAE 588


>gi|121593296|ref|YP_985192.1| aspartyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|222110018|ref|YP_002552282.1| aspartyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|166225313|sp|A1W4E1|SYD_ACISJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781730|sp|B9ME28|SYD_DIAST RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|120605376|gb|ABM41116.1| aspartyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|221729462|gb|ACM32282.1| aspartyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 603

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 224/599 (37%), Positives = 340/599 (56%), Gaps = 13/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG +  + +G  V LSGWV+R R HGG+IF+D+RD  G  QVV +PD    F++A+
Sbjct: 4   RSHYCGLVTEALLGQTVTLSGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRPEMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + GLV +R   T N ++ +G+IE+  Q++ +L+ +   P  +  +    E+
Sbjct: 64  DVRNEFCVQVKGLVRARPEGTTNDSLKSGKIEVLCQELNVLNPSVTPPFQMDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R +DLRR  + +N++ R +    +R  +  E FI+  TP+L  S+PEGARD+LVP
Sbjct: 123 TRLTHRVMDLRRPYMQRNMMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM +G+DRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    + +++ VF++    +     F  + Y +A  R+G+DKPDLR  +    +T
Sbjct: 242 LNEEEIRAIFQRMIKEVFQQQLGVDLGE--FPTMTYQEAAHRFGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKG----GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +     +F+VFS   ++  G  V      G    GG +R   D   E+ +  G  GLAYI
Sbjct: 300 DVMKDVDFKVFSGAANMKGGRVVALRVPGGAREEGGLSRGEIDGYTEFVKIYGAKGLAYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G      P+ K+++      +  R   QDGD  FF A             R  
Sbjct: 360 KVNDKAKGRDGLQSPIVKNIHDAALAEVLQRTGAQDGDLLFFGADKEKIVNDAIGALRLK 419

Query: 420 IAQ-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           +   E G  N    N +   W++DFP +E +EEE +    H+PFT P+ G E+L   D  
Sbjct: 420 VGHSEFGKKNGLFENRWAPLWVVDFPMFEHDEEEDRWVAVHHPFTSPKDGHENLMDTDPG 479

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              A  YD+V NG+E+  G +R H ++V  + F+ + I  E    +FG L  A Q G PP
Sbjct: 480 KCIAKAYDMVLNGWELGGGSVRIHRADVQAKVFAALNIGPEDQRAKFGYLLDALQYGAPP 539

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           HGG+A G+DR++ L+ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+   
Sbjct: 540 HGGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLRNP 598


>gi|89255468|ref|YP_512829.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115313996|ref|YP_762719.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156501393|ref|YP_001427458.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167009307|ref|ZP_02274238.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|290954556|ref|ZP_06559177.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295311996|ref|ZP_06802816.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|122325940|sp|Q0BPA2|SYD_FRATO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123094553|sp|Q2A622|SYD_FRATH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225346|sp|A7N949|SYD_FRATF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|89143299|emb|CAJ78461.1| Aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115128895|gb|ABI82082.1| aspartate--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156251996|gb|ABU60502.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 590

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 225/595 (37%), Positives = 345/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 2   RTHYSSDINEKLQGQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 62  LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 122 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E       +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 241 DEAFIMSTMERMIAGLFKETIGVEF-ATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 300 DMQNEEFKVFSGP-ANDPQSRVIALRISGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++ D  FF AG            R  I +
Sbjct: 359 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEDDLLFFGAGKTKIVNDSMGALRAKIGE 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E ++   ++   H+PFT P+   +E L   +   + +  
Sbjct: 419 DLDLFNKD-WAPLWVVDFPMFEKDD--NRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS +    +FG +  A   G P HGGIA 
Sbjct: 476 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ + +  +
Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAVKKEER 590


>gi|299067976|emb|CBJ39190.1| aspartate tRNA synthetase [Ralstonia solanacearum CMR15]
          Length = 607

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 222/596 (37%), Positives = 331/596 (55%), Gaps = 10/596 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEI 61
           + RT  CG +    +G  V LSGW HR R HGG+IF+D+RD  G+ QVV +PD    F++
Sbjct: 2   QMRTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKV 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+ L + G+V +R   T N N+ +G+IE+   ++ +L+ +   P  +  +    
Sbjct: 62  AEGVRNEFCLQVKGIVRARPEGTTNPNLASGKIEVLCHELTVLNASVTPPFQLDDDNLS- 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R  +R LDLRR  +  N+  R ++   +R  +  + FI+  TP+LT S+PEGARD+L
Sbjct: 121 ETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E 
Sbjct: 181 VPSRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++R VF+       +   F  + + +A+ R+G+DKPDLR  +    
Sbjct: 240 SFLTEQEIRDLFEEMIRTVFQNTM-SVALDAKFPVMEFREAMARFGSDKPDLRVKLEFTE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F+VFS   +   G  V      G   +R   D   ++    G  GLA+I  
Sbjct: 299 LTDAMKDVDFKVFSSPANAEGGRVVALRVPGGAALSRGDIDAYTKFVEIYGAKGLAWIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI- 420
                G      P+ K+L+      I  R   QDGD  FF A             R  + 
Sbjct: 359 NEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGADRAKVVNDAMGALRLKVG 418

Query: 421 ----AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
               A+  G+   + ++  W++DFP +E++EE+ +    H+PFT P+         D   
Sbjct: 419 HSEFAKSTGLF-EDAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGK 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G +R +  EV  + F  + I+ E    +FG L  A Q G PPH
Sbjct: 478 CIAKAYDMVLNGWEIGGGSVRIYREEVQSKVFRALKINDEEARAKFGFLLDALQYGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GGIA G+DR+V ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+ 
Sbjct: 538 GGIAFGLDRVVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLR 593


>gi|16803559|ref|NP_465044.1| aspartyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47097016|ref|ZP_00234589.1| aspartyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|224501541|ref|ZP_03669848.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254829722|ref|ZP_05234377.1| aspartyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|254898315|ref|ZP_05258239.1| aspartyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912193|ref|ZP_05262205.1| aspartyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936521|ref|ZP_05268218.1| aspartyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284801909|ref|YP_003413774.1| aspartyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995051|ref|YP_003416819.1| aspartyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|24212409|sp|Q8Y709|SYD_LISMO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|16410948|emb|CAC99597.1| aspartyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47014598|gb|EAL05558.1| aspartyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258609115|gb|EEW21723.1| aspartyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284057471|gb|ADB68412.1| aspartyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060518|gb|ADB71457.1| aspartyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|293590166|gb|EFF98500.1| aspartyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 591

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 228/597 (38%), Positives = 337/597 (56%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +    
Sbjct: 60  LEIADSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNTSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +++I    E++L  V +E  N       F R+ Y +A+ R+G+DKPD+R  + 
Sbjct: 239 LETSFLTKEEIQAITEDMLVDVVKEAKNITI-EKPFPRMTYKEAMDRFGSDKPDIRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + NV++     +F+VF   +      +     A     +R   D +  +  + G  GLA+
Sbjct: 298 LQNVSDVVKDVDFKVFQSAIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E+G +   GP+AK         ++V L  +DGD   F A       +     RN
Sbjct: 358 LKV---EAGELK--GPIAKFFPEDKAAELKVALQAEDGDLLLFAADKADIVAASLGALRN 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++L +IN     F W+ D+P +E++EE ++   AH+PFT+P+     L   D   + 
Sbjct: 413 KLGKDLNLINEEELAFLWVTDWPLFEYDEEAERYVSAHHPFTLPKEEDIPLLETDSSKVM 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGG
Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 533 IALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKKE 589


>gi|269138786|ref|YP_003295487.1| aspartyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267984447|gb|ACY84276.1| aspartyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304558778|gb|ADM41442.1| Aspartyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 591

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 217/591 (36%), Positives = 325/591 (54%), Gaps = 7/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG L +S VG  V L GWVHR R  GG+IF+D+RD  G+ QV  +PD    F  A 
Sbjct: 2   RTNYCGQLNLSHVGQEVTLCGWVHRRRDLGGLIFIDLRDREGVVQVFFDPDHQDAFRQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V +R     N ++ TG IE+    + I++ AE   LP+   +   E 
Sbjct: 62  ELRNEFCVQITGTVRARPESQRNRDMSTGDIEVFGNGLNIINRAEP--LPLDFNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I   +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 NRLKYRYLDLRRPEMAERLKTRAKITAFVRRFMDGHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +   ME + R ++ E    +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSAEQVREIMEALARALWMEIKGVD--LGDFPVMTFAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + +F+VFS   +   G  +      G    R   D   ++    G  GLA++    
Sbjct: 297 DLVKNVDFKVFSGPANDAKGRVIALRVPGGATLTRKNIDEYGQFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    EAI  R   Q GD  FF A             R  + ++
Sbjct: 357 RAAGMEGVQSPIAKFLNDEVLEAILARSGAQSGDIIFFGADSAKVATDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E +  E  +   H+PFT P+         + +   A  YD
Sbjct: 417 LQLTDESRWAPLWVVDFPMFEED-GEGGLAAMHHPFTSPRDISPEALKANPVGAIANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H   +    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVMNGYEVGGGSVRIHSGAMQSAVFDILGINEQEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR+VMLL G +N+R+V  FP +      L  +PS  +   L+EL + +   
Sbjct: 536 DRLVMLLTGTENIRDVIAFPKTTAAACPLTDAPSRANPASLQELSIAVCAK 586


>gi|163802053|ref|ZP_02195949.1| aspartyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159174194|gb|EDP59002.1| aspartyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 592

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 223/597 (37%), Positives = 334/597 (55%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R     N ++ TG++E+ A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPESQANKDMATGEVEILAKGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +  T E ++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVRATTEKMVREMWQELLNVDLGE--FPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   E+    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN      I  R   + GD   F A             R  + ++
Sbjct: 357 RAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+     +   W++DFP +E + +E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LGLTKEGTWAPLWVVDFPMFEED-DEGNLHAMHHPFTSPLGVSAEELKANPAAANSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K  +
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVTVAKEKDAE 592


>gi|260589626|ref|ZP_05855539.1| aspartate--tRNA ligase [Blautia hansenii DSM 20583]
 gi|331083058|ref|ZP_08332175.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260539866|gb|EEX20435.1| aspartate--tRNA ligase [Blautia hansenii DSM 20583]
 gi|330405060|gb|EGG84597.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 601

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 348/597 (58%), Gaps = 11/597 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60
            R+H C ++  +++GS V L GWV + R  GGI+F+D+RD  GI Q++    + D   FE
Sbjct: 9   KRSHRCTEVTKAEIGSTVTLMGWVQKSRNKGGIVFVDLRDRSGIMQIIFENGDIDEQGFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ + G V +RS   +N N+ TG+IE+ A ++ ILS AE  P P+    + 
Sbjct: 69  KAGRLRSEFVIAVKGRVEARSG-AVNPNLPTGEIEVRAIELRILSEAETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  L KN++ R+++   +R  +  E F+E  TP L  S+PEGARD+
Sbjct: 128 RDEVRLKYRYLDLRRPDLQKNMMLRSQVSTLVRQFLAKEGFLEIETPTLIKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGSFYALPQSPQIFKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ +D+L+  E +L  +F+E      V     R+ + DA+ R+G+DKPDLR  + + 
Sbjct: 247 LSFVDVEDVLDVNERMLAFLFKEVLGVE-VQLPIERMTWIDAMNRFGSDKPDLRFGMELT 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E     EF VF   L             +G    R   D++ E+A+  G  GLAYI 
Sbjct: 306 DVSEVVKDCEFAVFKGALENGGSVRGINAKGQG-AMPRKKIDKLVEFAKGYGAKGLAYIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G V      AK +     +A+   +  ++GD     A             R  +
Sbjct: 365 --IGEDGTVK--SSFAKFMKEEEMQALIQAMKGENGDLLLLAADKTKLVWDVLGALRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++ +++ N + F WI +FP  EW+EE+++    H+PFTMP          +   ++A 
Sbjct: 421 AKQMDLLDKNEYRFVWITEFPLLEWSEEDERFTAMHHPFTMPMEEDLQYIDTEPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R    +V  + F  +G +KE  + +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIFQDDVQEKMFEALGFTKEEAQKQFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML+    ++R+V  FP  ++   L+  +P  V  +QL ELG+ IV   ++
Sbjct: 541 YGLDRLVMLMAKVDSIRDVIAFPKVKDASCLMSEAPDIVDEKQLEELGIAIVAQKEE 597


>gi|119511813|ref|ZP_01630914.1| aspartyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119463525|gb|EAW44461.1| aspartyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 595

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 241/601 (40%), Positives = 353/601 (58%), Gaps = 17/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH C +L   D+G  V L GWV R R HGG+IFLD+RD  GI QVV++P      +++A
Sbjct: 2   RTHYCSELRKKDIGETVTLYGWVDRPRDHGGVIFLDLRDRSGIVQVVSDPQRTPDSYDLA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
            ++R+E+V+ I G V  R  E++N  + TG++E+ A KI +L+         +       
Sbjct: 62  NTLRNEYVVEITGTVTQRPEESLNLRLPTGEVEIYADKITLLNGVSKQLPFQVSRAYSES 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRR+ + +N+  R +++ +MR  +   E FIE  TPILT S+PEGAR
Sbjct: 122 VREDLRLKYRYLDLRRERMAQNMQLRHQVVKAMRRFLEDLEGFIEIETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+++PSR N G ++ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYILPSRSNPGEWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ Q++IL   E ++  +F+       ++  F R+ Y DA+ RYG+DKPD R  + 
Sbjct: 241 MEMSFMSQEEILALNEKLVAHIFKTVKGIE-LNLPFPRLTYADAMSRYGSDKPDTRYGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + NV++    S F+VF   ++     ++  IP      +         + + A   G  G
Sbjct: 300 LVNVSDVLKDSGFKVFRDAIAHGGIVKILPIPLGNDAISNVRIKPGGDLFKEASEAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LA+I  R+ E+G +  +G +  +L+    + I  R D + G    F AGD          
Sbjct: 360 LAFI--RVRENGEIDTIGAIKDNLSAEQKQEILQRTDAKPGHLLLFGAGDTATVNKTLDR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  +A+E  +IN       WI DFP +EWN +EK+++  H+PFT P         +DL 
Sbjct: 418 LRQVVAREFKLINPEKINLLWITDFPMFEWNADEKRLEALHHPFTAPHPED----VSDLK 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NG EI  G +R + S++  Q F  +G+S E  +N+FG L  AF+ G PP
Sbjct: 474 TARAQAYDLVLNGLEIGGGSLRIYQSDIQQQVFEAIGLSPEEAQNKFGFLLDAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +PS V V+QL++L +     P
Sbjct: 534 HGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQARCLLTDAPSGVDVKQLKDLHVASTYKP 593

Query: 596 K 596
           K
Sbjct: 594 K 594


>gi|149926629|ref|ZP_01914889.1| aspartyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149824558|gb|EDM83774.1| aspartyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 601

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 221/601 (36%), Positives = 346/601 (57%), Gaps = 10/601 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEI 61
           + RT  CG++  + +G  + L GWV R R HGG+IF+D+RD  G+ QVV +PD +  F  
Sbjct: 2   KMRTDYCGNVSQAYLGQTIALCGWVQRRRDHGGVIFIDLRDREGLVQVVCDPDLADVFST 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++R+E+ + ++GLV +R   T N+N+ +G +E+  + +EIL+ +   P  +  E    
Sbjct: 62  AETLRNEFCVRVEGLVRARPEGTENSNLKSGAVEVLCKGLEILNASVTPPFQLDDENLS- 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R  +R LDLRR  + KN++ R ++  ++R  + A+ F++  TP+LT S+PEGARD+L
Sbjct: 121 ETTRLTHRVLDLRRPQMQKNLMLRYKVAMAIRNHLDAQGFVDIETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G F+ALPQ+PQ +KQ+LM +G+DRY+QI  CFRDED R+DR P EF Q+D+E 
Sbjct: 181 VPSRVHAGEFFALPQSPQLFKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQVDIET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E+++R VF++  +   + N F  + Y +A+ R+G+DKPDLR  +    
Sbjct: 240 SFLGEQEIRDLFEDMIRKVFKQTMDVE-LQNPFPVMPYSEAMARFGSDKPDLRVKMEFTE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F+VFS   +++ G  V      G    R+  D   ++    G  GLA+I  
Sbjct: 299 LTDIMKDVDFKVFSGPANMDNGRVVALRVPGGAEIPRSEIDNYTKFVGIYGAKGLAWIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+ K+++      +  R    DGD  FF A             R  I 
Sbjct: 359 NELAKGRDGLQSPIVKNIHDTALNELLKRSGAADGDILFFGADKAKVVNDAMGALRLKIG 418

Query: 422 Q-----ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
                 + G++    +E  W++DFP +E +EE  +    H+PFT P+ G E     D   
Sbjct: 419 HSEFGQKAGLVQ-GKWEPLWVIDFPMFELDEEAGRWVACHHPFTSPKDGHEDYLTTDPGK 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+E+  G +R H  +V  + F  + IS+E    +FG L  A Q G PPH
Sbjct: 478 CIAKAYDMVLNGWELGGGSVRIHKEKVQSKVFRALNISEEEAAAKFGFLLDALQYGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DRIV ++ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+ +   
Sbjct: 538 GGLAFGLDRIVTMMSGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRLRQTEP 597

Query: 597 K 597
           K
Sbjct: 598 K 598


>gi|145636549|ref|ZP_01792217.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145270374|gb|EDK10309.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 588

 Score =  621 bits (1601), Expect = e-175,   Method: Composition-based stats.
 Identities = 216/592 (36%), Positives = 333/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQEALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ + + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELRVYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++ +    +     F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHGLWLDTIGVD--LGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKNVEFKVFNEPANNPNGRVAVIRVPNGTEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R+  Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPIAKFLNEDVWKALAERVKAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E + +E  +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFERD-DEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL + +V+  
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELAISVVKAE 588


>gi|145590071|ref|YP_001156668.1| aspartyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048477|gb|ABP35104.1| aspartyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 599

 Score =  620 bits (1600), Expect = e-175,   Method: Composition-based stats.
 Identities = 227/595 (38%), Positives = 335/595 (56%), Gaps = 10/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H+CG +  S +G  V LSGWV+R R HGG+IF+D+RD  G  QVV +PD    F +A+
Sbjct: 4   RSHTCGQVTDSLIGKEVTLSGWVNRRRDHGGVIFIDLRDREGFVQVVCDPDRPEMFALAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + I GLV +R A T N ++++G++E+    + IL+ +   P  +  E    E+
Sbjct: 64  QVRNEFCIQIKGLVRARPAGTENNDLVSGKVEVLCHGLVILNASITPPFQIDDENLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + KN+  R  +    R  +    FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPQMQKNLRLRYNVAMECRRYLDDAGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D E +F
Sbjct: 183 SRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETAF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I    EN++R +F++  N   + N F  + Y + + R+G+DKPDLR       +T
Sbjct: 242 LSELEIRELFENMIRHIFKKTMNVE-LPNPFPTMPYSEGMARFGSDKPDLRVNFEFTELT 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   + + G  V      G G +R+  D   ++    G  GLA+I    
Sbjct: 301 DLMKDVDFKVFSGAANQDGGRVVGLCVPGGAGISRSEIDDYTQFVSIYGAKGLAWIKVNS 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+L+    E I  R   +DGD  FF A           + R  I   
Sbjct: 361 VTEGRNGLQSPIVKNLHDAAIEGILKRTGAKDGDIIFFGADKEKVVNDAIGNLRLRIGHS 420

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +E G+     ++  W++DFP ++++E E +    H+PFT P+        +D     
Sbjct: 421 AWGKEHGLFTEG-WKPLWVVDFPMFDYDEGEARWVACHHPFTSPKDEHMQYLESDPGKCL 479

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG EI  G +R H   V  Q F  + I  E  + +FG L  A Q G PPHGG
Sbjct: 480 AKAYDMVLNGSEIGGGSVRIHQEVVQSQVFRALKIGAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           IA G+DRIV ++ GA+++R+V  FP +Q    LL  +PS+V   QL+EL +R+ +
Sbjct: 540 IAFGLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSSVDERQLKELHIRLRQ 594


>gi|117618858|ref|YP_856059.1| aspartyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117560265|gb|ABK37213.1| aspartyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 668

 Score =  620 bits (1600), Expect = e-175,   Method: Composition-based stats.
 Identities = 217/594 (36%), Positives = 323/594 (54%), Gaps = 8/594 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFE 60
              R+  CG +  +  G  + L GWVHR R  GG+IF+D+RD  GI QV  +PD    F 
Sbjct: 79  KSMRSIYCGQVNEAHAGQTITLCGWVHRRRDLGGLIFIDMRDREGIVQVFFDPDKPDAFA 138

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  +R E+ + + G+V +R     N+++ TG IE+ A ++ I++ AE   LP+   +  
Sbjct: 139 LASELRGEFCIQVSGVVRTRPDSQRNSDMATGAIEVFAHELTIINRAEP--LPLDFNQVN 196

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +  KYR+LDLRR  + K +  R +    +R  M    F++  TP+LT ++PEGARD+
Sbjct: 197 SEEVSLKYRYLDLRRPEMAKYLKTRAKASAFVRRFMDEHGFLDIETPMLTKATPEGARDY 256

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 257 LVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVE 315

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+    +   ME ++R ++    N +    +F  + +D+A+RRYG+DKPDLR P+ + 
Sbjct: 316 TSFMTAPQVREIMEEMIRKLWLHILNVD--LGDFPIMTFDEAMRRYGSDKPDLRLPMELV 373

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V +     EF VF+   +   G         G   +R   D   ++    G  GLA++ 
Sbjct: 374 DVADLLTAVEFAVFAGPANDPKGRVAALKVPGGAELSRKQIDEYTKFVGIYGAKGLAWMK 433

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                +G      PVAK L+      I  R    DGD  FF A      C      R  +
Sbjct: 434 VNEAANGIEGVQSPVAKFLSDAIVREILARTGAADGDIIFFGADSKKVVCDAMGALRLKV 493

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++LG++  N ++  W++DFP +E +  E  +   H+PFT P G        + +   A 
Sbjct: 494 GRDLGLL-ENSWKPLWVIDFPMFEED-GEGGLAAMHHPFTAPSGLSPEQLKANPVGAYAN 551

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H SE+    F  +GI+      +FG L  A + G PPH G+A
Sbjct: 552 AYDMVINGYEVGGGSVRIHNSEMQATVFDILGITPAEQRLKFGFLLDALKYGTPPHAGLA 611

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+ MLL G +N+R+V  FP +     L+  +PS  +  QL EL +     
Sbjct: 612 FGLDRLSMLLTGTENIRDVIAFPKTTAAACLMTDAPSFANAAQLGELAIATTVK 665


>gi|187927444|ref|YP_001897931.1| aspartyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|309779854|ref|ZP_07674609.1| aspartate--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|187724334|gb|ACD25499.1| aspartyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|308921431|gb|EFP67073.1| aspartate--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 623

 Score =  620 bits (1600), Expect = e-175,   Method: Composition-based stats.
 Identities = 223/602 (37%), Positives = 336/602 (55%), Gaps = 10/602 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEI 61
           + RT  CG +    +G  V LSGW HR R HGG+IF+D+RD  G+ QVV +PD    F++
Sbjct: 17  QMRTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKV 76

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+ L + G+V +R   T NAN+ +G++E+   ++ +L+ +   P  +  +    
Sbjct: 77  AEGVRNEFCLQVKGVVRARPEGTTNANLTSGKVEVLCHELTVLNASVTPPFQLDDDNLS- 135

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R  +R LDLRR  +  N+  R ++   +R  +  + FI+  TP+LT S+PEGARD+L
Sbjct: 136 ETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYL 195

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E 
Sbjct: 196 VPSRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCET 254

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++R VF+   + + +   F  + + +A+ R+G+DKPDLR  +    
Sbjct: 255 SFLSEQEIRDLFEEMIRTVFKNTMSVD-LDAKFPVMEFREAMARFGSDKPDLRVKLEFTE 313

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F+VFS   +   G  V      G   +R   D   ++    G  GLA+I  
Sbjct: 314 LTDAMKDVDFKVFSGPANAEGGRVVALRVPGGASLSRGDIDAYTKFVEIYGAKGLAWIKV 373

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI- 420
                G      P+ K+L+      I  R   QDGD  FF A             R  + 
Sbjct: 374 NEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGADRAKVVNDAMGALRLKVG 433

Query: 421 ----AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
               A+  G+   + ++  W++DFP +E++EE+ +    H+PFT P+         D   
Sbjct: 434 HSDFAKSTGLF-EDAWKPLWVIDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGK 492

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G +R +  EV  + F  + I+ E    +FG L  A Q G PPH
Sbjct: 493 CIAKAYDMVLNGWEIGGGSVRIYREEVQSKVFRALKINDEEARAKFGFLLDALQYGAPPH 552

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA G+DR+V ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+     
Sbjct: 553 GGIAFGLDRVVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLRAAEA 612

Query: 597 KI 598
           K+
Sbjct: 613 KV 614


>gi|217976405|ref|YP_002360552.1| aspartyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|254781742|sp|B8EN55|SYD_METSB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|217501781|gb|ACK49190.1| aspartyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 623

 Score =  620 bits (1600), Expect = e-175,   Method: Composition-based stats.
 Identities = 327/625 (52%), Positives = 421/625 (67%), Gaps = 31/625 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CGDL  +D     RLSGW HR+R HGG++F+D+RDHYGITQ V +PDS  F 
Sbjct: 1   MHRYRSHTCGDLRETDALQPTRLSGWCHRIRDHGGVLFIDLRDHYGITQCVVDPDSGAFP 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSEWV+ IDGLV  R A T N  + TG IE+   +IE+L  A ELPLPVFG++ Y
Sbjct: 61  LAEKLRSEWVVRIDGLVRQRPAGTENIEMPTGLIEVYVTEIEVLGAAAELPLPVFGDQNY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R +YRFLDLRR+ LH NI+ R R+I+S+R RM  + F E  TPILTASSPEGARDF
Sbjct: 121 PEDMRLRYRFLDLRREKLHNNIMLRGRVIDSLRARMKGQGFFEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR   EFYQLD+E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMTAGFDRYFQIAPCFRDEDLRADRSL-EFYQLDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+DI  T+E VLRGVFEEF  G  V+  F RI Y + + +YGTDKPDLRNP+++ 
Sbjct: 240 MSFVTQEDIFATVEPVLRGVFEEFGEGFAVTPEFPRIPYAETMLKYGTDKPDLRNPLVIV 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAYI 359
           +VTE F   +    +    +  G  V AIPA G G   R+F D++N+WAR +G  GL Y+
Sbjct: 300 DVTEEFSREDVSFNAFKNVIKQGGVVRAIPAPGAGAQPRSFFDKLNDWARGEGAAGLGYV 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +   ++G + G GP+AK L     +AI  +  ++ GD+ FF    P +    A  AR  
Sbjct: 360 IF-EGDAGALVGKGPIAKFLPADVQQAIAAKAGLKSGDAVFFACDRPDRAAKLAGAARLR 418

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL----- 474
           I  EL +     FE CWI+DFP YEWNE+EK+IDF+HNPF+MP   +E     +      
Sbjct: 419 IGSELKLSKTGVFELCWIVDFPMYEWNEDEKRIDFSHNPFSMPNCNLEQFLALETGVREE 478

Query: 475 -----------------------LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                                  L I AFQYD+VCNGFE++SG IRNH  ++M +AF+  
Sbjct: 479 IVGIDRGERNRDLNESNELRKRILEITAFQYDVVCNGFELSSGAIRNHRPDIMRKAFALA 538

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G  + V+E +FGG+YRAF  G PPHGGIA G+DRIVMLL G +N+RE+  FPM+Q   DL
Sbjct: 539 GYDETVLEQKFGGMYRAFHYGAPPHGGIAPGVDRIVMLLAGEENLREIVAFPMNQRGEDL 598

Query: 572 LMGSPSTVSVEQLRELGLRIVENPK 596
           L+G+PS V+ +QLREL +++    K
Sbjct: 599 LLGAPSNVTAKQLRELSIKLNLPEK 623


>gi|261252476|ref|ZP_05945049.1| aspartyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260935867|gb|EEX91856.1| aspartyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 592

 Score =  620 bits (1600), Expect = e-175,   Method: Composition-based stats.
 Identities = 223/594 (37%), Positives = 334/594 (56%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ A+   LP+   ++  E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPDSQVNKDMATGEVEIIAKGLEIINRAD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +  T E ++R +++E  + +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRATTEKMVREMWQELLDVD--LGQFPIMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   E+    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVIRVPGGAKLTRKQIDSYGEFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN      I  R   + GD   F A             R  +  +
Sbjct: 357 RAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANTVSEALGALRLKLGTD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + N + +   W++DFP +E + +E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LELTNESAWAPLWVVDFPMFEED-DEGNLHAMHHPFTSPLGVNAEELKANPAAANSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQSAVFDILGIEADEQQAKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+VMLL G +N+R+V  FP + N   LL  +PS  +   L EL + +    KK
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTNASCLLTDAPSLANPASLEELAIAVKAAEKK 589


>gi|114563355|ref|YP_750868.1| aspartyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122299595|sp|Q081N5|SYD_SHEFN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|114334648|gb|ABI72030.1| aspartyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 591

 Score =  620 bits (1599), Expect = e-175,   Method: Composition-based stats.
 Identities = 219/593 (36%), Positives = 334/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CGD+  S +G  V L GWV+R R  GG++FLD+RD  G+ QVV +PD    FE+A 
Sbjct: 2   RSHYCGDINQSHLGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLKDVFEMAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+ + I G+V +R    IN+ + TG+IE+  +++ I++ +  LPL +   +   E 
Sbjct: 62  TLRSEFCVQIKGVVRARPESQINSQMKTGEIEILGKQLTIINASAPLPLSMDNYQNNSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + ++ R ++ +S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 QRLKYRYLDLRRPEMAERLIFRAKVTSSVRRFLDGNGFLDIETPILTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++RG+F++  N +    +F R+ Y +A++RYG+DKPDLRNP+ + ++ 
Sbjct: 241 MSAEQVMEKTEQMMRGLFQDLLNVD--LGDFPRMTYAEAMKRYGSDKPDLRNPLELVDIA 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D   ++A   G  GLA++    
Sbjct: 299 DLVKDVEFAVFNGPANDVEGRVAALRIPTGASLSRKQIDDYTKFAGIYGAKGLAWMKIND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PV K L       I  R   Q GD   F A             R    ++
Sbjct: 359 LAAGMDGIQSPVLKFLTESIVNDIISRTGAQTGDIILFGADKANVVAEALGALRLKAGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    +   W++DFP +E           H+PFT P+G   +    D  +  +  YD
Sbjct: 419 FKLL-EGEWRPMWVVDFPMFEKI--NGGFHAVHHPFTAPRGISPAELAADPAAAISDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H +E+    FS +GI  E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGCELGGGSVRIHNAEMQSTVFSILGIEAEEAQEKFGFLLEALRYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DRI+ML+ GA ++R+V  FP +      L  +P   +  QL ELG+ ++E  K
Sbjct: 536 DRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLTELGIAVIEKVK 588


>gi|262374903|ref|ZP_06068137.1| aspartyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262309916|gb|EEY91045.1| aspartyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 594

 Score =  620 bits (1599), Expect = e-175,   Method: Composition-based stats.
 Identities = 239/594 (40%), Positives = 343/594 (57%), Gaps = 9/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYPE 122
            VRSE+VL I G V  R   T NAN+++GQIE+  ++IE+L+ ++  P P+  E     E
Sbjct: 63  KVRSEFVLKITGRVRRRYEGTENANMVSGQIEVLGKEIEVLAQSDTPPFPLNDENTNISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLD+RR  +   +  R+++ N +R       F++  TPILT ++PEGARD+LV
Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKLTNLIRNYFEDNGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVSNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E  N       F R+ Y+DA+R Y +DKPD+R P+ + +V
Sbjct: 242 FMSDDDIMDLMETLTVKMFKELLNVEFDK--FPRMTYNDAMRDYASDKPDMRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+       G  V       G   R+  D   ++    G  GLAYI   
Sbjct: 300 ADLMQDVEFKVFAGPAKDPKGRIVALRVPGAGSLPRSAIDEYTKFVGIYGARGLAYIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G      P+ K +  +  + ++ R+  ++GD  FF A             R  I  
Sbjct: 360 ELEKGIEGLQSPIVKFIEPIVLDLLK-RVGAENGDIVFFGADKAKVVNDAMGALRVKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ++ +  C  +   W++DFP +E  ++  K    H+PFT+P+  +E +K N   +  +  Y
Sbjct: 419 DMKLATCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTLPKSSVEEVKNN-PGAALSVAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG EI  G +R H  E+    F  +GI +E  E +F  L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTEIGGGSLRIHNLEMQKAIFEALGIGEEEAEEKFSFLLNALRYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR+VML+ G  ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PK
Sbjct: 536 LDRLVMLMTGGASIRDVIAFPKTKTAECPLTQAPAPVESNQLRDLGIRLREKPK 589


>gi|92113967|ref|YP_573895.1| aspartyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|122990497|sp|Q1QWG2|SYD_CHRSD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91797057|gb|ABE59196.1| aspartyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 592

 Score =  620 bits (1599), Expect = e-175,   Method: Composition-based stats.
 Identities = 230/593 (38%), Positives = 343/593 (57%), Gaps = 8/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+H CG L  + V   V L GWVHR R HGG+IFLD+RD  GI QVV +PD+   F  A 
Sbjct: 2   RSHYCGQLNETLVDEEVALCGWVHRRRDHGGVIFLDLRDRDGIAQVVVDPDTPEAFANAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             R+E+VL I G +  R   T NA++ TG IE+ A+ +E+L+ A   P  +    +  E 
Sbjct: 62  RARNEFVLRIRGRIRLRPEGTQNAHMPTGMIEVLAKDVEVLNTAATPPFQLDEHGKVGEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR K+R++DLRR  +   +  R+RI +S+R  +  + F++  TPILT ++PEGARD+LVP
Sbjct: 122 IRLKHRYIDLRRPEMIDKLRLRSRITHSVRAYLEGQGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHAGEFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDLEASF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ DI++  E+++R +F++  +    +  F ++ Y +A+ RYG+DKPDLR P+ + +V 
Sbjct: 241 VEESDIMSLTEDMIRRLFQDVLDVELPA--FPKMPYSEAMNRYGSDKPDLRIPLELVDVD 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS     + G         G   +R   D   ++    G  GLA+I    
Sbjct: 299 DLMQGVDFKVFSGPAKADDGRVAALKVTGGATLSRKEIDAYTDFVNIYGAKGLAWIKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +     E++  R+  +DGD  FF A             R  + ++
Sbjct: 359 RAKGIQGLQSPIVKFM-EDIIESLLDRVGAEDGDIIFFGADKARIVNEALGALRVKLGED 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     +   W++DFP +E  ++  ++   H+PFT P    E+ K  D  +  +  YD
Sbjct: 418 LDLYTQ-AWAPLWVVDFPMFE-ADDNGRLAALHHPFTAPSCTPEAFKA-DPANALSRAYD 474

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H   +    F  +GI +E  + +FG L  A + G PPHGG+A G+
Sbjct: 475 MVLNGTELGGGSIRIHDQTMQRAVFEVLGIGEEEADEKFGFLLDALKFGAPPHGGLAFGL 534

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VML+ GA+ +REV  FP +Q+   L+  +P  VS EQL+EL +R+ +  +
Sbjct: 535 DRLVMLMSGARTIREVIAFPKTQSAACLMTDAPGEVSAEQLKELNIRLRQKAQ 587


>gi|257871025|ref|ZP_05650678.1| aspartyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257805189|gb|EEV34011.1| aspartyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 590

 Score =  620 bits (1599), Expect = e-175,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 329/595 (55%), Gaps = 10/595 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG +  + +   V L GWV + R  GG+IF+D+RD  GI QVV NP+     + I
Sbjct: 3   KRTVYCGRVSEAHLDQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEVSKEAWAI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A + RSE+VL + G V++R+ E IN  + TG  E+   +I IL+ A+     +  ++   
Sbjct: 63  ADTCRSEYVLEVTGQVINRAPEAINPKMKTGHYEVMVSEITILNTAKTPAFSIEDDQIVG 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R KYR+LDLRR  + KNI+ R +    +R  +   +F++  TP L  S+PEGARD+L
Sbjct: 123 DETRLKYRYLDLRRPKMTKNIMMRAKTTQVIRHFLDTNDFLDIETPYLAKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRVYPGHFYALPQSPQIFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F+  ++I    E +L  V  E      V+  F R+ YDDA+ RYG+DKPD R  + + +
Sbjct: 242 TFLTAEEIQAYTEELLVNVMREVKGLE-VTTPFPRMTYDDAMARYGSDKPDTRFDMELID 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E     +F+VF   L      +           +R   D +  +A   G  GLA++  
Sbjct: 301 LSETVKDVDFKVFQMALENGGVVKALNAKGAADKYSRKDMDNLGHYAGQFGAKGLAWVKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK L      +I    + + GD   F A       +     R+ + 
Sbjct: 361 EED-----GLKGPIAKFLTDA-AASIIAATNAEVGDILMFGADKFEIVSAALGAIRSKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +ELG+I+ + F F W+ D+P +E++ E  +   AH+PFTMP+     L   D   + A  
Sbjct: 415 KELGLIDESKFNFLWVTDWPQFEYDAEAGRYVSAHHPFTMPKEKDVPLLATDPAKVYAEA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  +V  Q F  +G S+  +E +FG L  A   G PPHGGIA 
Sbjct: 475 YDIVLNGYELGGGSLRIHQRDVQEQMFETLGFSRREMEEQFGFLLTALDYGFPPHGGIAL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VMLL G +N+REV  FP +    D +  +PS V+  QL EL + +    +
Sbjct: 535 GLDRLVMLLAGEENIREVIAFPKNGKAADPMSQAPSKVAPLQLFELNIDVTTVEE 589


>gi|304316702|ref|YP_003851847.1| aspartyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778204|gb|ADL68763.1| aspartyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 593

 Score =  620 bits (1599), Expect = e-175,   Method: Composition-based stats.
 Identities = 236/592 (39%), Positives = 342/592 (57%), Gaps = 11/592 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             RTH CG+L + DVG  V + GWV R R  GG+IFL++RD  G+ Q+V +       F+
Sbjct: 8   MKRTHMCGELTLEDVGKSVIVMGWVQRRRDLGGLIFLELRDRTGLIQIVCSEQLSKEAFD 67

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ VR+E+VL   G V+ RS E IN N+ TG IE+   + +ILS AE  P  V      
Sbjct: 68  KAQHVRNEYVLAAAGEVVRRSDENINPNLETGNIEIYVSEFKILSKAETPPFMVEDRNNV 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR ++ K ++ R RI   +R  +    FI+  TP+L  S+PEGARD+
Sbjct: 128 SEAIRLKYRYLDLRRPSMQKILMTRYRITRIVRDFLDKNGFIDIETPLLIKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  G F+ALPQ+PQ +KQLLM SGFDRY+QIA C RDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVQPGKFFALPQSPQIFKQLLMISGFDRYYQIAKCLRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVE+DD++   E ++  +F+E  + + +   F RI + +A+ R+G+DKPD+R  + + 
Sbjct: 247 MSFVEEDDVIALNEKMIARIFKEILDID-LEVPFKRISWQEAMNRFGSDKPDMRFGMELK 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +++  F  S+F+VF   +          +        R   D + E+ ++    GL +I 
Sbjct: 306 DLSSIFADSDFKVFKDAVQNGGSVRGINVK-GAASMPRRQLDELVEYVKTYKAKGLVWIQ 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADARNH 419
              D          ++K L       +   ++ + GD    +A              R  
Sbjct: 365 MLDD-----GPRSQISKFLKDDEMTQVVNVMEAEKGDLILIVADKNNMVVYDALGHLRLE 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +   +I+ + +EF W++DFP  E++EEEK+    H+PFT P+     +   D   ++A
Sbjct: 420 MGKRYNLIDESKYEFLWVVDFPLLEYSEEEKRFVAMHHPFTAPKDEDIEMLDKDPGRVRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G IR H +E+  + F  +G + E  E RFG L  AF+ G PPHGGI
Sbjct: 480 KAYDIVLNGLEIGGGSIRIHDTELQKKMFKVLGFTDEDAEARFGFLLNAFKYGAPPHGGI 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+ M+L G  N+R+V  FP +QN CDL+  SPS VS EQL EL +++
Sbjct: 540 AYGLDRLTMILTGTDNIRDVIAFPKTQNACDLMSDSPSEVSKEQLDELHIKV 591


>gi|22298687|ref|NP_681934.1| aspartyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|46577258|sp|Q8DJS8|SYD_THEEB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|22294867|dbj|BAC08696.1| aspartyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 605

 Score =  620 bits (1599), Expect = e-175,   Method: Composition-based stats.
 Identities = 245/613 (39%), Positives = 357/613 (58%), Gaps = 21/613 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CGD+ + DVG+ V L GWV R R HGG+IF+D+RD  GI Q+V++P      +  A
Sbjct: 2   RTHYCGDVRLRDVGTTVTLYGWVDRRRDHGGVIFIDLRDRSGIVQIVSDPQRTPDAYPQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG---ERE 119
           + +RSE+V+ + G V  R A+++N  + TG IE+ A  IE+L+   +            E
Sbjct: 62  ERLRSEYVVKVVGRVSKRPADSVNPKLATGDIEIYADGIEVLNTVRQQLPFAISSTENEE 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178
             E +R +YR+LDLRR+ + +N+  R R++ +MR  +  E  FIE  TPILT S+PEGAR
Sbjct: 122 VREEVRLRYRYLDLRRERMARNLRLRHRVVQAMRRFLEDEAGFIEVETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G ++ALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGEWFALPQSPQLFKQLLMVAGCDRYYQIAHCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF++Q++IL+  E ++  +F+       +   F R+ Y +A+ RYGTDKPD R  + 
Sbjct: 241 MEMSFMDQEEILDLNEALICHIFKTVKGIE-LPRPFPRLSYQEAMDRYGTDKPDTRYGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V++    S F+VFS  ++     ++  IP      +         + + A + G  G
Sbjct: 300 LVDVSDILKDSGFKVFSGAIAQGGVVKILPIPNGSDRISNVRIKPGGDLFQEATTAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI  R+  +G +  +G +  +L+      +  R   Q G    F AG+          
Sbjct: 360 LAYI--RVRNNGEIDTIGAIKDNLSPEQKALLLERTGAQPGHLLLFGAGETATVNKTLDR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  IA+E  +I+       W++DFP +EWN EEK+++  H+PFT P          DL 
Sbjct: 418 LRQTIAREFNLIDPTATHLLWVVDFPMFEWNAEEKRLEALHHPFTAPHPEDLG----DLK 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDL+ NG E+  G +R H  E+  Q F  +GI +   + +FG L  AF+ G PP
Sbjct: 474 TARAQAYDLIFNGHEVGGGSLRIHQPELQRQVFEIIGIDEATAQEKFGFLLEAFEFGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL GA ++R+   FP +Q    LL G+PS+V  +QL+EL +     P
Sbjct: 534 HGGIAYGLDRLVMLLAGADSIRDTIAFPKTQQARCLLTGAPSSVEPQQLKELHV----TP 589

Query: 596 KKILKISVTTILR 608
            K  K +  T  R
Sbjct: 590 AKPAKTTAKTKPR 602


>gi|85059235|ref|YP_454937.1| aspartyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|97196892|sp|Q2NTJ3|SYD_SODGM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|84779755|dbj|BAE74532.1| aspartyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 596

 Score =  620 bits (1598), Expect = e-175,   Method: Composition-based stats.
 Identities = 219/597 (36%), Positives = 336/597 (56%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  GG+IF+D+RD  G+ QV  +PD    F  A 
Sbjct: 2   RTVYCGQLNLSHVGQEVMLCGWVNRRRDLGGLIFIDMRDREGLVQVFFDPDRQDAFARAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ L + G+V +R    +N+ + TG +E+ A ++ I++ +E   LP+   +   E 
Sbjct: 62  ELRNEFCLQLTGIVRARPDSQVNSEMATGAVEVLATELSIINCSEP--LPLDSNQNNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLRR  + + +  R RI + +R  M AE F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKFRYLDLRRPVMAQRLKTRARISSFVRRFMDAEGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E +  +     F ++ Y DA+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTATQVREVMERLIRDLWREITGVD--LGIFPQMTYADAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   + + G         G   +R   D   +++   G  GLA++    
Sbjct: 297 DLVKDVQFKVFSIPANDSQGRVAALRVPGGAQLSRKQIDEYGKYSEIYGAKGLAWMKVNQ 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L     E I VR    D D  FF A             R  +  +
Sbjct: 357 RAAGVEGVQSPVAKFLGPQVIEQILVRTGAADSDIIFFSADRKNVVTDALGALRLKLGLD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   + +   W++DFP +E +  E  +   H+PFT P+     +      S  A  YD
Sbjct: 417 LQLTVTDRWAPLWVVDFPMFEED-GEGGLAAMHHPFTAPKDVDAQMLAASPTSAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  ++    F  + I+++  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHRGDMQQTVFGILAINEQEQQEKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+VMLL G  N+R+V  FP +    DL+  +PS  + + L +L + +V   ++ ++
Sbjct: 536 DRLVMLLTGTDNIRDVIAFPKTTAAADLMTEAPSFGNADALADLSIAVVGKGREAME 592


>gi|17545185|ref|NP_518587.1| aspartyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|24212408|sp|Q8Y270|SYD_RALSO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|17427476|emb|CAD13994.1| probable aspartyl-trna synthetase (aspartate--trna ligase)(asprs)
           protein [Ralstonia solanacearum GMI1000]
          Length = 605

 Score =  620 bits (1598), Expect = e-175,   Method: Composition-based stats.
 Identities = 222/594 (37%), Positives = 329/594 (55%), Gaps = 10/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +    +G  V LSGW HR R HGG+IF+D+RD  G+ QVV +PD    F++A+
Sbjct: 2   RTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L + G+V +R   T N N+ +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 62  GVRNEFCLQVKGIVRARPEGTTNPNLASGKIEVLCHELTVLNASVTPPFQLDDDNLS-ET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R ++   +R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 181 SRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+       +   F  + + +A+ R+G+DKPDLR  +    +T
Sbjct: 240 LSEQEIRDLFEEMIRTVFQNTM-SVALDAKFPVMEFREAMARFGSDKPDLRVKLEFTELT 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G  V      G   +R   D   ++    G  GLA+I    
Sbjct: 299 DAMKDVDFKVFSGPANAEGGRVVALRVPGGAALSRGDIDAYTKFVEIYGAKGLAWIKVNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI--- 420
              G      P+ K+L+      I  R   QDGD  FF A             R  +   
Sbjct: 359 VAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGADRAKVVNDAMGALRLKVGHS 418

Query: 421 --AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
             A+  G+   + ++  W++DFP +E++EE+ +    H+PFT P+         D     
Sbjct: 419 DFAKSTGLF-EDAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGKCI 477

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV  + F  + I  E    +FG L  A Q G PPHGG
Sbjct: 478 AKAYDMVLNGWEIGGGSVRIYREEVQSKVFRALKIGDEEARAKFGFLLDALQYGAPPHGG 537

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IA G+DR+V ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+ 
Sbjct: 538 IAFGLDRVVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLR 591


>gi|323499465|ref|ZP_08104436.1| aspartyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323315452|gb|EGA68492.1| aspartyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 592

 Score =  620 bits (1598), Expect = e-175,   Method: Composition-based stats.
 Identities = 221/594 (37%), Positives = 336/594 (56%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD +  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPDSQVNKDMATGEVEIIAKGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D++  T E ++R +++E  + +    +F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADEVRATTEKMVRDMWQELLDVD--LGDFPVMPFSEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   E+    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVIRVPGGAKLTRKQIDGYGEFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN      I  R   + GD   F A             R  + ++
Sbjct: 357 RAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEAMGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + N +   W++DFP +E + +E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LELTDENAWAPLWVVDFPMFEED-DEGNLHAMHHPFTSPLGVNAEELKANPAAANSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI  E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQAAVFDILGIDAEEQQLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    KK
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVKVAEKK 589


>gi|291523618|emb|CBK81911.1| aspartyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 599

 Score =  620 bits (1598), Expect = e-175,   Method: Composition-based stats.
 Identities = 227/597 (38%), Positives = 344/597 (57%), Gaps = 11/597 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
             RTH C +L  + VG  V + GWV + R  GG++F+D+RD  GI Q++   +      F
Sbjct: 8   MKRTHRCAELSKAQVGQTVTVMGWVQKSRNKGGVVFVDLRDRSGILQIIFEENKCGTEIF 67

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +RSE+V+ + G V  R A  +N N+ TG+IE+ A+++ ILS +E  P  +    +
Sbjct: 68  EKAGKLRSEFVIAVTGQVCER-AGAVNKNLATGEIEVIAEQLRILSESETPPFHIEENSK 126

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLRR  + KNI+ R+R    +R  +  E F+E  TP+LT S+PEGARD
Sbjct: 127 TKEELRLKYRYLDLRRPDIQKNIMMRSRACAVIRNFLTEEGFLEIETPMLTKSTPEGARD 186

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQ+A CFRDED R+DR P EF Q+DM
Sbjct: 187 YLVPSRVHPGSFYALPQSPQLFKQLLMVSGYDRYFQLARCFRDEDLRADRQP-EFTQVDM 245

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E+SFV+ DD+++  E +L  +F+E    + V     R+ + +A+ R+G+DKPD R  + +
Sbjct: 246 ELSFVDVDDVIDVNERLLARLFKEIIGVD-VPLPIQRMTWQEAMDRFGSDKPDTRFGMEL 304

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++VT+     EF VF   ++            +G    R   D +  + +  G  GLAYI
Sbjct: 305 NDVTDVVRDCEFAVFKNAIADGGSVRGINAKGQGT-MPRKKIDALVAFVKDYGAKGLAYI 363

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             + D     +     AK +     +A+   +  + GD   F A       +     R  
Sbjct: 364 AIQPDG----SIKSSFAKFMKDEEMQALIAAMQGEPGDLLLFAADKNKIVYASLGALRLE 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A ++G+++ N + F W+ +FP  EW++EE +    H+PFTMP          D   ++A
Sbjct: 420 LADKMGLLDKNQYNFLWVTEFPLLEWSDEENRFQAMHHPFTMPMEEDLQYIDTDPGRVRA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G +R H  ++  + F  +G +KE    +FG L  AF+ G+PPH G+
Sbjct: 480 KAYDIVLNGTEIGGGSVRIHQDDIQEKMFEALGFTKERAHEQFGFLLDAFKYGVPPHAGL 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR++ML+    ++R+V  FP  ++   LL  +P TV  +QL ELG+R+ E  +
Sbjct: 540 AYGLDRLIMLMAKVDSIRDVIAFPKVKDASCLLTNAPDTVDEKQLEELGIRVNEAEQ 596


>gi|91203210|emb|CAJ72849.1| strongly similar to aspartyl-tRNA ligase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 587

 Score =  620 bits (1598), Expect = e-175,   Method: Composition-based stats.
 Identities = 236/595 (39%), Positives = 345/595 (57%), Gaps = 11/595 (1%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT +CG L + +V S V L GWV  VR HGG+IF+D+RD  GITQVV NPD+A  
Sbjct: 1   MSKLKRTCTCGQLRLKEVDSTVVLMGWVDSVRDHGGVIFIDLRDREGITQVVFNPDTANK 60

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+A  +RSE+V+ I G V +R A T+N ++ TG+IE+ A ++EI + +E  P  +   
Sbjct: 61  SCELAHQLRSEYVIAIKGKVAARPAGTVNPDLATGEIEVLADELEIFNKSETPPFEIIDN 120

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                 +R KYR+LDLRR  +  +++ R ++  ++R       FI+  TP+LT S+PEGA
Sbjct: 121 SNVSLELRLKYRYLDLRRSEMQTHLIFRHKVCQTIREYFNTRGFIDIETPVLTKSTPEGA 180

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRVN G  YALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+ R P EF Q+
Sbjct: 181 RDYLVPSRVNHGKVYALPQSPQLFKQVLMVSGFDRYFQIVRCFRDEDLRAQRQP-EFTQI 239

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSFV++ DI+  +E ++  +FE+      V+  F R+ Y +++  YG D PDLR  +
Sbjct: 240 DMEMSFVDEADIIQVIEGLIAAIFEKVVG-KPVNLPFPRLLYQESMASYGCDAPDLRFGM 298

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            +H+V+     S F+VF + ++           A  G  +R   D + E+    G  GLA
Sbjct: 299 RIHDVSHIVKESNFKVFLETINSGGQVRAIN-AAGCGHYSRKDIDGLTEFVSQFGARGLA 357

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +  ++++E+G V     + K       + I+  ++ + GD   F+A          A  R
Sbjct: 358 W--FKVEETGLV---SSITKFFPPEILQKIQQHMNAKAGDLLLFVADKEKVVSQSLAHLR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            H+  +  +IN   F F WI+DFP +E+NE+ K+    H+PFT P+           L +
Sbjct: 413 THLGHKNNLINAEEFNFVWIVDFPLFEYNEDAKRYVALHHPFTSPRSEDIPFLEEKPLEV 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG E+  G IR H  E+  + F  +GI+      +FG L  A + G PPHG
Sbjct: 473 RARAYDLVLNGVELGGGSIRIHSPEIQKRVFRLLGINDNDAYQKFGFLLDALKFGAPPHG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIA GIDR++ LLL   ++REV  FP +Q     +  +PS    +QL+ELG+ + 
Sbjct: 533 GIALGIDRMIALLLHLDDIREVIAFPKTQKATCPMTEAPSEADPQQLKELGISLA 587


>gi|172058095|ref|YP_001814555.1| aspartyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|229559870|sp|B1YJF7|SYD_EXIS2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|171990616|gb|ACB61538.1| aspartyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 588

 Score =  619 bits (1597), Expect = e-175,   Method: Composition-based stats.
 Identities = 233/592 (39%), Positives = 336/592 (56%), Gaps = 11/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH  G +    +G  V+L GWV + R  GG+IFLD+RD  GI QVV  P+      +A+
Sbjct: 4   RTHMNGTVTEETIGQAVQLKGWVQKRRDLGGLIFLDLRDRTGIVQVVFQPENEQAHRLAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122
           S+RSE+VL I G V+ R  E  N NI TGQ+E+ A ++ IL+ ++  P P+  E E   E
Sbjct: 64  SIRSEYVLDIKGTVVQR--ENPNPNIPTGQVEVVADEVIILNASKMTPFPISEEAEQTSE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR +L +    R++  N MR  +  ++F+E  TPILT S+PEGARD+LV
Sbjct: 122 DLRLKYRYLDLRRPSLQETFRLRSKASNIMRNFLDEQDFLEVETPILTKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SGF+RYFQIA CFRDED R+DR P EF Q+D+E S
Sbjct: 182 PSRVHPGEFYALPQSPQLFKQLLMVSGFERYFQIARCFRDEDLRADRQP-EFTQVDIETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++ +D+   ME+++  V +E    +  +  F R+ Y +A+ R+G+DKPD R  + + +V
Sbjct: 241 FMDVEDLYAMMESMMTRVMKETLGKDI-TTPFPRMPYAEAMSRFGSDKPDTRFGLELIDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            E    + F+VF   L      +   +       +R   D++ E+    G  GLA++   
Sbjct: 300 AEAVTGAGFKVFDMALESGGEVKALNVKGAADQFSRKDIDKLQEFTAIYGAKGLAWVKVT 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK  +   T  +      + GD   F+A             R  + +
Sbjct: 360 AD-----GLNGPIAKFFDEAATARLVEATTAEAGDLLVFVAAKASIVADSLGALRQKLGK 414

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+   F F W+ DFP   + E + +    H+PFTMP+         D  S+ A  Y
Sbjct: 415 ELGLIDETVFNFLWVTDFPLVTFEEADSRFYANHHPFTMPRREDLDKLETDPGSVLAVAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+  G  R +  ++  + F  +G ++E    +FG L  AF+ G PPH GIA G
Sbjct: 475 DLVLNGYELGGGSQRIYERDIQERMFKLLGFTEEEANEQFGFLMEAFEYGTPPHAGIALG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR++MLL G  N+R+   FP + +  DLL  +PS VS  QL EL +R    
Sbjct: 535 LDRLIMLLAGRTNLRDTIAFPKTASASDLLTAAPSPVSDAQLNELSIRTAVK 586


>gi|332305755|ref|YP_004433606.1| aspartyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173084|gb|AEE22338.1| aspartyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 592

 Score =  619 bits (1597), Expect = e-175,   Method: Composition-based stats.
 Identities = 216/595 (36%), Positives = 336/595 (56%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG++  S +G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  F+ A 
Sbjct: 2   RTDYCGNINASHIGQTVTLCGWVNRRRDLGGVIFIDLRDREGIVQVVYDPDLADLFDTAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE+ + I+GLV +R    +N ++ TG+IE+  + + IL+ +    LP+   +E  E 
Sbjct: 62  SLRSEFCVQIEGLVRARPQGQVNKDMGTGEIEILGKGLTILNKS--AVLPLDSNQENSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R ++ +++R  +  + F++  TPILT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPVMSDRLKFRAKVTSAVRSYLEGDGFLDIETPILTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D+E +F
Sbjct: 180 SRTHKGKFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETTF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++R +F +  N +     F ++ Y DA+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 LSAEQVMEITEGMIRDLFMKMLNVD--LGAFPQMTYADAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   ++    G  GLA++    
Sbjct: 297 DILKDVEFKVFSGPANDAEGRVAVIRVPGGSSMTRKQIDEYTKFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G      P+ K L     + +  R++ Q GD   F A             R  + ++
Sbjct: 357 IDAGVDGLQSPILKFLGEDVAKQVLSRVEAQSGDILLFGADTATVVTEALGALRLKVGED 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++    ++  W++DFP +E  E + +    H+PFT P+         D  +  +  YD
Sbjct: 417 LNLL-EGEWKPLWVIDFPMFE--EFDGQFYALHHPFTAPRDMTPEQLAADPANALSNAYD 473

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  ++  + F+ +GIS E  E +FG L  A + G PPH G+A G+
Sbjct: 474 MVLNGCELGGGSVRIHDQDMQAKVFNILGISDEEAEVKFGFLLDALKFGAPPHAGLAFGL 533

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           DR+VML+ GA ++R+V  FP +      L  +P   S EQL+EL ++      K 
Sbjct: 534 DRLVMLMTGATSIRDVMAFPKTTTAACPLTDAPGVASDEQLKELSIKTDIAQDKA 588


>gi|109899255|ref|YP_662510.1| aspartyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123170932|sp|Q15RN2|SYD_PSEA6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|109701536|gb|ABG41456.1| aspartyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 592

 Score =  619 bits (1597), Expect = e-175,   Method: Composition-based stats.
 Identities = 215/595 (36%), Positives = 338/595 (56%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG++  S +G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  F+ A 
Sbjct: 2   RTDYCGNINASHIGQTVTLCGWVNRRRDLGGVIFIDLRDREGIVQVVYDPDLAELFDTAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE+ + I+GLV +R    +N ++ TG+IE+  + + IL+ +    LP+   +E  E 
Sbjct: 62  SLRSEFCVQIEGLVRARPQGQVNKDMGTGEIEILGKGLTILNKS--AVLPLDSNQENSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   +  R ++ +++R  +  + F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPVMSDRLKFRAKVTSAVRSYLEGDGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D+E +F
Sbjct: 180 SRTHKGKFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETTF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E ++R +F +  N +     F ++ Y DA+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 LGAEQVMKITEGMIRNLFMKMLNVDLGE--FPQMTYADAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   ++    G  GLA++    
Sbjct: 297 DILKDVEFKVFSGPANDAKGRVAVIRVPGGASMTRKQIDEYTKFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G      P+ K L     + +  R++ Q GD   F A             R  + ++
Sbjct: 357 IDAGLEGLQSPILKFLGEDVAKQVLSRVEAQSGDILLFGADSATVVTEALGALRLKVGED 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++    ++  W++DFP +E  E + +    H+PFT P+         D  +  +  YD
Sbjct: 417 LDLL-EGEWKPLWVIDFPMFE--EFDGQFYALHHPFTAPRDMTAEQLAADPANALSNAYD 473

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  ++  + F+ +GIS+E  E +FG L  A + G PPH G+A G+
Sbjct: 474 MVLNGCELGGGSVRIHNQDMQAKVFNILGISEEEAEVKFGFLLDALKFGAPPHAGLAFGL 533

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           DR+VML+ GA ++R+V  FP +      L  +P   S EQL+EL ++     +K 
Sbjct: 534 DRLVMLMTGATSIRDVMAFPKTTTAACPLTDAPGIASDEQLKELSIKTDIVQEKA 588


>gi|241661974|ref|YP_002980334.1| aspartyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240864001|gb|ACS61662.1| aspartyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 623

 Score =  619 bits (1597), Expect = e-175,   Method: Composition-based stats.
 Identities = 223/602 (37%), Positives = 335/602 (55%), Gaps = 10/602 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEI 61
           + RT  CG +    +G  V LSGW HR R HGG+IF+D+RD  G+ QVV +PD    F++
Sbjct: 17  QMRTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKV 76

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+ L + G+V +R   T NAN+ +G++E+   ++ +L+ +   P  +  +    
Sbjct: 77  AEGVRNEFCLQVKGVVRARPEGTTNANLTSGKVEVLCHELTVLNASVTPPFQLDDDNLS- 135

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R  +R LDLRR  +  N+  R ++   +R  +  + FI+  TP+LT S+PEGARD+L
Sbjct: 136 ETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYL 195

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E 
Sbjct: 196 VPSRVNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCET 254

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++R VF+   +   +   F  + + +A+ R+G+DKPDLR  +    
Sbjct: 255 SFLSEQEIRDLFEEMIRTVFKNTMSVE-LDAKFPVMEFREAMARFGSDKPDLRVKLEFTE 313

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F+VFS   +   G  V      G   +R   D   ++    G  GLA+I  
Sbjct: 314 LTDAMKDVDFKVFSGPANAEGGRVVALRVPGGASLSRGDIDAYTKFVEIYGAKGLAWIKV 373

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI- 420
                G      P+ K+L+      I  R   QDGD  FF A             R  + 
Sbjct: 374 NEVAKGRDGLQSPIVKNLHDAAIAEILKRSGAQDGDILFFGADRAKVVNDAMGALRLKVG 433

Query: 421 ----AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
               A+  G+   + ++  W++DFP +E++EE+ +    H+PFT P+         D   
Sbjct: 434 HSDFAKSTGLF-EDAWKPLWVIDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGK 492

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG+EI  G +R +  EV  + F  + I+ E    +FG L  A Q G PPH
Sbjct: 493 CIAKAYDMVLNGWEIGGGSVRIYREEVQSKVFRALKINDEEARAKFGFLLDALQYGAPPH 552

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA G+DR+V ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+     
Sbjct: 553 GGIAFGLDRVVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLRAAEA 612

Query: 597 KI 598
           K+
Sbjct: 613 KV 614


>gi|293390528|ref|ZP_06634862.1| aspartyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951062|gb|EFE01181.1| aspartyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 592

 Score =  619 bits (1597), Expect = e-175,   Method: Composition-based stats.
 Identities = 213/593 (35%), Positives = 336/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  +++G  + LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RSHYCGALNRTNIGQEITLSGWVHRRRDLGGLIFIDMRDREGIVQVCFDPKYQKALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+ ++I + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIQGEVIARPDNQINKNMATGEVEVLAKVLKIYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +++  R +I   +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQHLKTRAKITGFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G+++     +     F  + + +A+RR+G+DKPDLRN + M +V 
Sbjct: 240 LTAPEVREIMERMVHGLWQHILGVD--LGKFPVMTWQEAMRRFGSDKPDLRNLLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + +F++F    +   G  +     +G    R   D   ++    G  GLA++    
Sbjct: 298 DIVKNVDFKIFQGPANDPNGRVIVIRVPRGNEITRKQIDEYTQFVGIYGAKGLAWLKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R+  Q GD  FF A             R  + ++
Sbjct: 358 VNAGLEGVQSPIAKFLNEDVLKALFERVGAQTGDILFFGADKWQTATDSMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E + +E  +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFERD-DEGCLAAMHHPFTSPKDFTPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI +E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL +++V++ K
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSEANPQALSELSIQVVKSNK 589


>gi|156973887|ref|YP_001444794.1| aspartyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166225442|sp|A7N1J1|SYD_VIBHB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|156525481|gb|ABU70567.1| hypothetical protein VIBHAR_01597 [Vibrio harveyi ATCC BAA-1116]
          Length = 592

 Score =  619 bits (1597), Expect = e-175,   Method: Composition-based stats.
 Identities = 223/597 (37%), Positives = 334/597 (55%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  +E+A 
Sbjct: 2   RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R    +N ++ TG++E+ A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  TLRNEFCIKLTGEVRVRPESQVNKDMATGEVEILAKGLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +  T E ++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVRATTEKMVREMWQELLNVDLGE--FPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   E+    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN      I  R   + GD   F A             R  + ++
Sbjct: 357 RAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I     +   W++DFP +E + +E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LDITKEGTWAPLWVVDFPMFEED-DEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K  +
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVTVAKEKDAE 592


>gi|307150082|ref|YP_003885466.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306980310|gb|ADN12191.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 595

 Score =  619 bits (1597), Expect = e-175,   Method: Composition-based stats.
 Identities = 236/601 (39%), Positives = 347/601 (57%), Gaps = 17/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62
           RTH CG+L  SD+   V L GWV R R HGG+IF D+RD  G+ Q+V++       ++ A
Sbjct: 2   RTHYCGELRASDIDKTVTLFGWVDRYRDHGGVIFADLRDRTGVVQIVSDSQRTPESYQAA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
            ++R+E+V+ ++G V  R  E++N  I TG++E+ A  IEIL+         +       
Sbjct: 62  ATLRNEYVIKVEGRVSKRPPESLNPKIPTGEVEIYADSIEILNGVNKQLPFVVSSEEAEL 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRR+ +  N+  R +++ +MR  +   +NFIE  TPILT S+PEGAR
Sbjct: 122 VREEVRLKYRYLDLRRERMMNNLKLRHQVVKAMRRYLEDQQNFIEVETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR N G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRANPGKWYALPQSPQLFKQLLMVSGVDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+  D+IL   E ++  +F+   N +       R+ Y DA+ +YGTD+PD R  + 
Sbjct: 241 MEMSFMSLDEILELNEGLIAHIFKSTKNIDI-PLPLPRLTYTDAMGKYGTDRPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V+E      F+VFS  +S     ++  IP      +         + + A   G  G
Sbjct: 300 LVDVSEIVKDCAFKVFSGAVSSGGVVKILPIPEAANVISNVQIKPGGELFKEAAEAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AYI  R+ E   +  +  +  +L+    + +  +   + G    F AGD        A 
Sbjct: 360 IAYI--RIKEGNELDTIAAIKDNLSEEQKQQLIEKTGAKPGYLLLFGAGDVDTVNKSLAR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  + ++LG+I+ N     W+ DFP +EWN EEK+++  H+PFT P+         DL 
Sbjct: 418 LRLVVGEKLGLIDKNKINLLWVTDFPMFEWNAEEKRLEALHHPFTAPKPEDLH----DLS 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
             +A  YD+V NG EI  G +R +  ++  + F+ +G+S E   ++FG L  AF+ G PP
Sbjct: 474 HARALAYDMVFNGIEIGGGSLRIYQRDIQEKVFATIGLSMEEAYSKFGFLLEAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +PSTV  +QL+EL +     P
Sbjct: 534 HGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQASCLLTEAPSTVEPKQLKELHIASTFKP 593

Query: 596 K 596
           K
Sbjct: 594 K 594


>gi|327398593|ref|YP_004339462.1| aspartyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181222|gb|AEA33403.1| aspartyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 595

 Score =  619 bits (1596), Expect = e-175,   Method: Composition-based stats.
 Identities = 237/596 (39%), Positives = 350/596 (58%), Gaps = 11/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RTH CGD+   D+   V L GWV   R HGG+IF+D++D  GI Q+V +P  D    + 
Sbjct: 7   KRTHYCGDVRADDIDKEVVLFGWVQNWRDHGGVIFIDLKDREGIVQIVFDPSVDEKIHQE 66

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RS++ + + G V  R   T+N N+ TG++E+  +K+E+ S  E LP PV       
Sbjct: 67  ASKLRSQYCIGVKGKVRHRPEGTVNPNLKTGEVEVVVEKLEVFSECENLPFPVEEYVHVN 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLR+  + +N++ R++   + R  + ++ FIE  TPILT S+PEGARDFL
Sbjct: 127 EEVRLKYRYLDLRKPHMQRNLIMRSKAAFAARNYLHSQGFIEIETPILTKSTPEGARDFL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ G FYALPQ+PQ +KQLLM SG+D+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 187 VPSRLSPGRFYALPQSPQLFKQLLMVSGYDKYYQITKCFRDEDLRADRQP-EFTQIDLEM 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE+DD++   E +L  +F+E +  +     F RI Y +A+ R+G+DKPD+R  + +  
Sbjct: 246 SFVEEDDVIEVTEGILASIFKEVAGIDINP-PFKRISYQEAMDRFGSDKPDMRFGLELKK 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-GGNRAFCDRMNEWARSQGQPGLAYIF 360
           +T+   ++ F+VF  ++        + + AKG     R   D + +     G  GLA+I 
Sbjct: 305 LTDIVENTNFKVFRDVVEKGGIV--YGLNAKGCIDFTRKEIDDLTKLVSIYGAKGLAWIK 362

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +     N     P+ K  +    + I  RLD + GD  FF+A  P          R  I
Sbjct: 363 VKA----NYELQSPIVKFFSKEEIDGILKRLDAEPGDLLFFMADTPKVVYDSLGALRLEI 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L + N + F F W++DFP +EWNE+E + +  H+PFT P+        +D   +KA 
Sbjct: 419 GRKLNLTNGDEFNFVWVVDFPLFEWNEDENRWEAMHHPFTSPKPEDLEYLESDPARVKAR 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+  NG EI  G IR H S+V  + F  +GIS E  + +FG L  A + G PPHGG+A
Sbjct: 479 AYDITLNGVEIGGGSIRIHRSDVQKRMFKALGISDEEAQVKFGFLIEALKYGAPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G DRI+ L+L  K++R+V  FP +Q    +L  +PS V  +QL EL +R+ +  K
Sbjct: 539 LGFDRIMTLILKEKSIRDVIAFPKTQKGVCMLTDAPSEVDEKQLNELSIRVRKPKK 594


>gi|153828676|ref|ZP_01981343.1| aspartyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229529746|ref|ZP_04419136.1| aspartyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|148875829|gb|EDL73964.1| aspartyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229333520|gb|EEN99006.1| aspartyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|327483869|gb|AEA78276.1| Aspartyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 591

 Score =  619 bits (1596), Expect = e-175,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 329/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD    F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMVDVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVD--LGDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLLKDVDFKVFSGPANDPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L     +AI  R   Q GD   F A             R    +E
Sbjct: 357 LAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LGI N + +   W++DFP +E +++E  +   H+PFT P          +     +  YD
Sbjct: 417 LGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +    K
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAVKLATK 588


>gi|27468229|ref|NP_764866.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57867125|ref|YP_188768.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|293366414|ref|ZP_06613092.1| aspartate-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258359|sp|Q8CS99|SYD_STAES RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62287515|sp|Q5HNS2|SYD_STAEQ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|27315775|gb|AAO04910.1|AE016748_144 aspartyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57637783|gb|AAW54571.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|291319448|gb|EFE59816.1| aspartate-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329735236|gb|EGG71528.1| aspartate--tRNA ligase [Staphylococcus epidermidis VCU045]
 gi|329737268|gb|EGG73522.1| aspartate--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 588

 Score =  619 bits (1596), Expect = e-175,   Method: Composition-based stats.
 Identities = 237/595 (39%), Positives = 345/595 (57%), Gaps = 11/595 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M++ RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD     
Sbjct: 1   MNK-RTTYCGLVTEEFLNEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGE 117
            ++A++VRSE+V+ ++G+V  R AETIN  I TGQ+E+    IEI++ +E          
Sbjct: 60  LQVAETVRSEYVVEVEGVVTKRDAETINPKIKTGQVEVQVSNIEIINKSETPPFSINEEN 119

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGA
Sbjct: 120 VNVDENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGA 179

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+
Sbjct: 180 RDYLVPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQV 238

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV+Q+DI+   E++LR V ++    + VS  F R+ Y +A+ R+G+DKPD R  +
Sbjct: 239 DIEMSFVDQEDIIAMGEDMLRKVVKDVKGID-VSGPFPRMTYAEAMDRFGSDKPDTRFGM 297

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + NV++      F+VF   +  N   +            R   D + E+    G  GLA
Sbjct: 298 ELINVSQLGKEMNFKVFKDTVDNNGEIKAIVAKDAANKYTRKDMDALTEFVNIYGAKGLA 357

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++    D        GP+A+    VN E ++   + + GD   F+A  P          R
Sbjct: 358 WVKVVDD-----GLSGPIARFFEDVNVETLKQLTEAKPGDLVMFVADKPNVVAQSLGALR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ELG+I+ +   F W+ D+P  E++E+ K+   AH+PFT P+         +  ++
Sbjct: 413 IKLAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEPENV 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G IR H  E+  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 473 QANAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFTNEQAQEQFGFLLDAFKYGAPPHG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIA G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL+EL LRI 
Sbjct: 533 GIALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLQELSLRIR 587


>gi|167756852|ref|ZP_02428979.1| hypothetical protein CLORAM_02401 [Clostridium ramosum DSM 1402]
 gi|167703027|gb|EDS17606.1| hypothetical protein CLORAM_02401 [Clostridium ramosum DSM 1402]
          Length = 585

 Score =  619 bits (1596), Expect = e-175,   Method: Composition-based stats.
 Identities = 226/594 (38%), Positives = 350/594 (58%), Gaps = 12/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L +SDV   V L GWV + R  G ++F+D+RD YGITQ+V N +     + K 
Sbjct: 3   RTHNNGELRISDVNKIVELKGWVAKKRNLGSLVFIDLRDRYGITQIVLNEE--MEALGKD 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +++E+VL + G V+ RS++  N N+ TG IE+ A +I+I++ A+  P+    + +  E  
Sbjct: 61  IKNEYVLHVVGKVIERSSK--NPNMPTGDIEIEAAQIDIINTAKVTPIYTTDDTDASEDA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR  +   I+ R +I +S+R  +    FI+  TP L  S+PEGARDFLVPS
Sbjct: 119 RMQYRYLDLRRPVMQNKIIMRHKITSSIRNFLDNHEFIDIETPYLNRSTPEGARDFLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ GSFYALPQ+PQ +KQLLM SGF+RY+QIA CFRDED R DR P EF Q+D+EMSF+
Sbjct: 179 RVHNGSFYALPQSPQLFKQLLMVSGFERYYQIARCFRDEDLRLDRQP-EFTQVDVEMSFM 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             D+I++  E +L  V ++      +     R+ + +A+ +YG DKPD+R  + + N+ E
Sbjct: 238 TTDEIISIGEQLLAQVMKDVKGIE-LQLPLPRMTWHEAMEKYGIDKPDIRFGLELVNLNE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                EF VF   L  +   +   +  +    +R   D++ +  ++    GLA++  +  
Sbjct: 297 VVKDVEFMVFKSALEADGHVKGINVKGEADNFSRKAIDKLTDVVKTYKAKGLAWLKVKAG 356

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHIAQE 423
           ++      GP+AK  N      +   +D  D D   F+        C   A  RNH+ +E
Sbjct: 357 KA-----EGPIAKFFNEEQMTKLLKAMDASDNDLLLFVSDAKYNVVCDALAALRNHLGKE 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + N + F F W++DFP +E+++E ++    H+PFT P+        ND  +  A  YD
Sbjct: 412 LKLFNPDEFAFLWVVDFPMFEYDDETERYYAVHHPFTRPKDSDIDKIENDPANCLADAYD 471

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NGFE+  G  R +  E+  +AF  +G ++E ++++FG    AFQ G PPHGG A G+
Sbjct: 472 IVLNGFELGGGSQRIYEQELQERAFRALGFTQERIDSQFGWFVEAFQYGTPPHGGFALGL 531

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+ MLL G++N+REV  FP + +    +  +PS V   QL ELG+ ++E+ ++
Sbjct: 532 DRLAMLLTGSENIREVIAFPKNASAVCPMSKAPSEVDNAQLEELGIAVIEDEQE 585


>gi|251811034|ref|ZP_04825507.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875946|ref|ZP_06284813.1| aspartate--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|251805452|gb|EES58109.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281294971|gb|EFA87498.1| aspartate--tRNA ligase [Staphylococcus epidermidis SK135]
          Length = 588

 Score =  619 bits (1596), Expect = e-175,   Method: Composition-based stats.
 Identities = 237/595 (39%), Positives = 345/595 (57%), Gaps = 11/595 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M++ RT  CG +    +   V L GWVH  R  GG+IF+D+RD  GI Q+V NPD     
Sbjct: 1   MNK-RTTYCGLVTEEFLNEKVTLKGWVHNRRDLGGLIFVDLRDREGIVQIVFNPDFSEEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGE 117
            ++A++VRSE+V+ ++G+V  R AETIN  I TGQ+E+    IEI++ +E          
Sbjct: 60  LQVAETVRSEYVVEVEGVVTKRDAETINPKIKTGQVEVQVSNIEIINKSETPPFSINEEN 119

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E+IR KYR+LDLRR  L +    R +   S+R  +    F +  TP+LT S+PEGA
Sbjct: 120 VNVDENIRLKYRYLDLRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGA 179

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV++G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+
Sbjct: 180 RDYLVPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQV 238

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV+Q+DI+   E++LR V ++    + VS  F R+ Y +A+ R+G+DKPD R  +
Sbjct: 239 DIEMSFVDQEDIIAMGEDMLRKVVKDVKGID-VSGPFPRMTYAEAMDRFGSDKPDTRFGM 297

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + NV++      F+VF   +  N   +            R   D + E+    G  GLA
Sbjct: 298 ELINVSQLGKEMNFKVFKDTVDNNGEIKAIIAKDAANKYTRKDMDALTEFVNIYGAKGLA 357

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++    D        GP+A+    VN E ++   + + GD   F+A  P          R
Sbjct: 358 WVKVVDD-----GLSGPIARFFEDVNVETLKQLTEAKPGDLVMFVADKPNVVAQSLGALR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ELG+I+ +   F W+ D+P  E++E+ K+   AH+PFT P+         +  ++
Sbjct: 413 IKLAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEPENV 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G IR H  E+  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 473 QANAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFTNEQAQEQFGFLLDAFKYGAPPHG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIA G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL+EL LRI 
Sbjct: 533 GIALGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTDAPGEVSDKQLQELSLRIR 587


>gi|293611096|ref|ZP_06693395.1| aspartyl-tRNA synthetase [Acinetobacter sp. SH024]
 gi|292826748|gb|EFF85114.1| aspartyl-tRNA synthetase [Acinetobacter sp. SH024]
          Length = 594

 Score =  619 bits (1596), Expect = e-175,   Method: Composition-based stats.
 Identities = 234/594 (39%), Positives = 335/594 (56%), Gaps = 9/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R   T N N+++GQIE+  ++IE+L+ +E  P P+  +     E
Sbjct: 63  KARSEYVLKITGRVRRRYEGTENQNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLD+RR  +   +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EHRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  D+I++ ME +   +F +          F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLNDDEIMDLMEGMTVKLFNDLLGVKFEK--FRRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+       G  V           R+  D   ++    G  GLAYI   
Sbjct: 300 ADLMQEVEFKVFAGPAKDPKGRIVALRVPGAASLPRSAIDEYTKFVGIYGAKGLAYIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K +  +  E +  R+  QDGD  FF A             R  I  
Sbjct: 360 ELAKGIEGLQSPIVKFIEPIVLE-LLERVGAQDGDIVFFGADKAKVVNDAMGALRVKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +  C  +   W++DFP +E  ++  K    H+PFT+P+  +E +K ++     +  Y
Sbjct: 419 DLNLSTCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTLPKSSVEDVK-SNPGEALSVAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PK
Sbjct: 536 LDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589


>gi|149191827|ref|ZP_01870064.1| aspartyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148834345|gb|EDL51345.1| aspartyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 592

 Score =  619 bits (1595), Expect = e-175,   Method: Composition-based stats.
 Identities = 220/594 (37%), Positives = 330/594 (55%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  +E+A 
Sbjct: 2   RSHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V  R    +N ++ TG++E+ A  +EI++ ++   LP+   +   E 
Sbjct: 62  QLRNEFCIKLTGEVRVRPESQVNKDMATGEVEILATGLEIINRSD--VLPLDFNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR++DLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    E ++R +++E  N +     F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSADQVREVTEKMVRDMWQELLNVD--LGQFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   E+    G  GLA++    
Sbjct: 297 DLLKDVEFKVFSGPANDEKGRVAVIRVPGGASLTRKQIDGYAEYVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN      I  R + + GD   F A             R  I ++
Sbjct: 357 RSAGMEGIQSPVAKFLNEEVINGILERTEAESGDIILFGADKANTVAEAMGALRLKIGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E + +E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LELTDESKWAPLWVVDFPMFEED-DEGNLHAMHHPFTSPLGMTAEELKANPAAANSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI  E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQAAVFEILGIDAEEQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSAANPAALEELAIAVTAAKEK 589


>gi|262281084|ref|ZP_06058866.1| aspartyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257315|gb|EEY76051.1| aspartyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 595

 Score =  618 bits (1594), Expect = e-175,   Method: Composition-based stats.
 Identities = 240/598 (40%), Positives = 337/598 (56%), Gaps = 9/598 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYPE 122
             RSE+VL I G V  R   T NAN+++GQIE+  + IE+L+ +E  P P+  E     E
Sbjct: 63  KARSEYVLKITGRVRRRYEGTENANMVSGQIEVLGKDIEVLAASETPPFPLNDENTNISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLD+RR  +   +  R+++ N +R       F++  TPILT ++PEGARD+LV
Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKLTNLIRNYFEDNGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E          F R+ Y DA+R Y +DKPD+R P+ + +V
Sbjct: 242 FMSDDDIMDLMEVLTVKMFDELLGVKFDK--FQRMTYADAMRDYASDKPDMRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+       G  V           R+  D   ++    G  GLAYI   
Sbjct: 300 ADLMQEVEFKVFAGPAKDPKGRIVALRVPGAASLPRSAIDEYTKFVGIYGAKGLAYIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K +  +  E +  R+  QDGD  FF A             R  I  
Sbjct: 360 ELAKGIEGLQSPIVKFIEPIVLE-LLARVGAQDGDIVFFGADKAKVVNDAMGALRVKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +  C  +   W++DFP +E  ++  K    H+PFT+P+  +E +K ++     +  Y
Sbjct: 419 DLNLSTCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTLPKSSVEEVK-SNPGEALSVAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           +DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PK   K
Sbjct: 536 LDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPKAEEK 593


>gi|121730021|ref|ZP_01682434.1| aspartyl-tRNA synthetase [Vibrio cholerae V52]
 gi|121628240|gb|EAX60758.1| aspartyl-tRNA synthetase [Vibrio cholerae V52]
          Length = 575

 Score =  618 bits (1594), Expect = e-175,   Method: Composition-based stats.
 Identities = 219/579 (37%), Positives = 324/579 (55%), Gaps = 7/579 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVD--LGDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLLKDVDFKVFSGPANDPKGRVAALCIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L     +AI  R   Q GD   F A             R    +E
Sbjct: 357 LAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LGI N + +   W++DFP +E +++E  +   H+PFT P          +     +  YD
Sbjct: 417 LGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           DR+VMLL G +N+R+V  FP +     L+  +PS  +  
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLMTDAPSLANPA 574


>gi|218439984|ref|YP_002378313.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|226736531|sp|B7KB89|SYD_CYAP7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218172712|gb|ACK71445.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 595

 Score =  618 bits (1594), Expect = e-175,   Method: Composition-based stats.
 Identities = 238/601 (39%), Positives = 348/601 (57%), Gaps = 17/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CGDL  SD+   V L GWV R R HGG+IF D+RD  G  Q+V++P      ++ A
Sbjct: 2   RTHYCGDLRASDIDKTVTLFGWVDRYRDHGGVIFADLRDRTGRVQIVSDPQRTPESYQAA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
            ++R+E+V+ ++G V  R  E++N  I TG++E+ A  IEIL+         +       
Sbjct: 62  ANLRNEYVIKVEGRVSKRPKESLNPKIPTGEVEIYADSIEILNGVNKQLPFVISSEDAEL 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRRD + KN+  R +++ +MR  +   +NF+E  TPILT S+PEGAR
Sbjct: 122 VREEVRLKYRYLDLRRDRMRKNLQLRHQVVQAMRRYLEDQQNFMEVETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR N G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRTNPGKWYALPQSPQLFKQLLMVSGVDRYYQIARCFRDEDNRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+  D+IL+  E ++  VF+   N +     F R+ Y +A+ +YG D+PD R  + 
Sbjct: 241 MEMSFMSFDEILDLNEGLIAHVFKTVKNIDI-PRPFPRLTYAEAMEKYGIDRPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V+E    S F+VFS  +      +V  IP      +         + + A   G  G
Sbjct: 300 LVDVSEIVKDSGFKVFSGAVKSGGIVKVLPIPEATNIISNVQIKPGGELFKEATEAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AYI  R+ ++  +  +  +  +L     + +  +   + G    F AGD        A 
Sbjct: 360 IAYI--RIKDNNELDTIAAIKDNLTDEQKQELIEKTGAKPGHLLLFGAGDTDTVNKSLAR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  + ++LG+I+ +     W+ DFP +EWN EEK+++  H+PFT P+        NDL 
Sbjct: 418 LRLVVGEKLGLIDEDKINLLWVTDFPMFEWNAEEKRLEALHHPFTAPKPEDI----NDLP 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
             +A  YD++ NG E+  G +R +  ++  + FS +G+S E   N+FG L  AF+ G PP
Sbjct: 474 HARALAYDMIFNGIELGGGSLRIYQRDIQEKVFSTIGLSMEEAYNKFGFLLEAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR VMLL   +++R+V  FP +Q    LL  +PSTV  +QL+EL +     P
Sbjct: 534 HGGIAYGLDRFVMLLAKEESIRDVIAFPKTQQASCLLTEAPSTVEPKQLKELHIASTFKP 593

Query: 596 K 596
           K
Sbjct: 594 K 594


>gi|330829085|ref|YP_004392037.1| aspartyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328804221|gb|AEB49420.1| Aspartyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 588

 Score =  618 bits (1594), Expect = e-175,   Method: Composition-based stats.
 Identities = 217/591 (36%), Positives = 323/591 (54%), Gaps = 8/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +  +  G  + L GWVHR R  GG+IF+D+RD  GI QV  +PD    F +A 
Sbjct: 2   RSIYCGQVNEAHAGQTITLCGWVHRRRDLGGLIFIDMRDREGIVQVFFDPDKPDAFALAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R E+ + + G+V +R     N+++ TG IE+ A ++ I++ AE   LP+   +   E 
Sbjct: 62  ELRGEFCIQVTGVVRTRPESQRNSDMATGAIEVFAHELNIINRAEP--LPLDFNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           I  KYR+LDLRR  + K +  R +    +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ISLKYRYLDLRRPEMAKYLKTRAKASAFVRRFMDEHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++    N +    +F  + +D+A+RRYG+DKPDLR P+ + +V 
Sbjct: 239 MTAPQVREVMEEMIRKLWLHILNVD--LGDFPIMTFDEAMRRYGSDKPDLRLPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DLLTAVEFAVFAGPANDPKGRVAALKVPGGAELSRKQIDEYTKFVGIYGAKGLAWMKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L+      I  R    DGD  FF A      C      R  + ++
Sbjct: 357 AANGIEGVQSPVAKFLSDAIVREILARTGAADGDIIFFGADSKKVVCDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG++  N ++  W++DFP +E +  E  +   H+PFT P     +    + +   A  YD
Sbjct: 417 LGLL-ENSWKPLWVIDFPMFEED-GEGGLAAMHHPFTAPSNMSPAELKANPVGAYANAYD 474

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H SE+    F  +GI+      +FG L  A + G PPH G+A G+
Sbjct: 475 MVINGYEVGGGSVRIHNSEMQSTVFDILGITPAEQRLKFGFLLDALKYGTPPHAGLAFGL 534

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR+ MLL G +N+R+V  FP +     L+  +PS  +  QL EL +     
Sbjct: 535 DRLSMLLTGTENIRDVIAFPKTTAAACLMTDAPSLANAAQLGELAIATTVK 585


>gi|332707194|ref|ZP_08427247.1| aspartyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332353928|gb|EGJ33415.1| aspartyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 595

 Score =  618 bits (1594), Expect = e-175,   Method: Composition-based stats.
 Identities = 237/601 (39%), Positives = 343/601 (57%), Gaps = 17/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L    +G  V L GWV + R HGG+IFLD+RD  GI Q+V++P+     ++ A
Sbjct: 2   RTHYCGELRSQHIGETVTLCGWVSKRRDHGGVIFLDLRDISGIVQIVSDPERTPDSYKDA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP- 121
             +R+E+V+ + G V  R  E++N  + TG++E+ A  IE+L+   +         +   
Sbjct: 62  DHLRNEYVVKVTGRVTKRPDESLNPKLPTGEVEIYALYIELLNKVRKQLPFQVSSADTES 121

Query: 122 --ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRRD + KN+  R ++I  +R  +   + FIE  TP+LT S+PEGAR
Sbjct: 122 VREDLRLKYRYLDLRRDRMSKNVQLRHQVIRGIRRYLEDEQGFIEVETPVLTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGQWYALPQSPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ Q++IL   E ++  +F+     +     F R+ Y +A+ RYG+DKPD R  + 
Sbjct: 241 MEMSFMSQEEILQLNETLVCHIFKTVKGIDI-PRPFPRLTYAEAMERYGSDKPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + NV++    S F+VFS  +      +V  IP      +         + + A   G  G
Sbjct: 300 LVNVSDLMKDSGFKVFSGAVKTGGVVKVLPIPGGNEAISNVRIKPGGDLFKEASEAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AYI  R+ E G +  +G +  +L+    + +        G    F AG           
Sbjct: 360 IAYI--RVREGGEIDTIGAIKDNLSHSQKQQLLEATGATAGHLLLFGAGSADIVNKTLDR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  I QELG+I+       W+ DFP +EWN +EK+++  H+PFT P          DL 
Sbjct: 418 LRLVIGQELGLIDSTKINLLWVTDFPMFEWNADEKRLEALHHPFTAPHPDDLD----DLK 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NG EI  G +R +  E+  Q F  +G+S+E   ++FG L  AF  G PP
Sbjct: 474 TARAQAYDLVWNGVEIGGGSLRIYQPEIQQQVFEAIGLSEEEAHSKFGFLLEAFDYGAPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +P  V  +QL+EL +    + 
Sbjct: 534 HGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQARSLLTDAPGGVDDKQLKELYVASTYHD 593

Query: 596 K 596
           +
Sbjct: 594 E 594


>gi|325123420|gb|ADY82943.1| aspartyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 594

 Score =  618 bits (1594), Expect = e-175,   Method: Composition-based stats.
 Identities = 234/594 (39%), Positives = 335/594 (56%), Gaps = 9/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
             RSE+VL I G V  R   T N N+++GQIE+  ++IE+L+ +E  P P+  +     E
Sbjct: 63  KARSEYVLKITGRVRRRYEGTENHNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLD+RR  +   +  R+++ N +R  +    F++  TPILT ++PEGARD+LV
Sbjct: 123 EHRLKYRFLDIRRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  D+I++ ME +   +F +          F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLNDDEIMDLMEGMTVKLFNDLLGVKFEK--FRRMPYSEAMRDYASDKPDLRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+       G  V           R+  D   ++    G  GLAYI   
Sbjct: 300 ADLMQEVEFKVFAGPAKDPKGRIVALRVPGAASLPRSAIDEYTKFVGIYGAKGLAYIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K +  +  E +  R+  QDGD  FF A             R  I  
Sbjct: 360 ELAKGIEGLQSPIVKFIEPIVLE-LLERVGAQDGDIVFFGADKAKVVNDAMGALRVKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +  C  +   W++DFP +E  ++  K    H+PFT+P+  +E +K ++     +  Y
Sbjct: 419 DLNLSTCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTLPKSSVEDVK-SNPGEALSVAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PK
Sbjct: 536 LDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589


>gi|254362358|ref|ZP_04978467.1| aspartate--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153093947|gb|EDN74863.1| aspartate--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 588

 Score =  618 bits (1594), Expect = e-175,   Method: Composition-based stats.
 Identities = 221/592 (37%), Positives = 335/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S +G  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+ A 
Sbjct: 3   RSHYCGALNRSHLGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEALFKQAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE  + I G V++R    IN  + TG+IE+  + + + + AE   LP+   +   E 
Sbjct: 63  ALRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNLVVYNNAE--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   ME ++ G+++E    +     F  + +++A+ R+G+DKPDLRNP+ M +V 
Sbjct: 240 MTAEEVRALMEAMIHGLWKETLGVD--LGKFPMMTWNEAMTRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G  V      G    R   D   ++    G  GLA++    
Sbjct: 298 DILKSVDFKVFSGPANDPKGRVVALRVPNGAALTRKNIDDYTQFVGIYGAKGLAWLKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN    +A+  RL++Q  D  FF A +     +     R  +  +
Sbjct: 358 MNTGLEGIQSPVAKFLNEEVLKALVKRLNLQKDDIVFFGADNWHVATNAIGALRLKVGND 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ +   ++  W++DFP +E + +E  +   H+PFT P+         D  +  A  YD
Sbjct: 418 LGLTDTTAWKPLWVIDFPMFERD-DEGNLSAMHHPFTSPKELSPEELVQDPENAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    FS +GI++E  + +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFSQQMQQTVFSILGINEEEQKEKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ ML+ G  N+R+V  FP +     L+  +PS  + + L EL +R +   
Sbjct: 537 DRLTMLITGTDNIRDVIAFPKTTAAACLMTEAPSYANPKALEELAIRTIPQE 588


>gi|88195441|ref|YP_500245.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|123098030|sp|Q2FXU5|SYD_STAA8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|87202999|gb|ABD30809.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|329728340|gb|EGG64777.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 588

 Score =  618 bits (1594), Expect = e-175,   Method: Composition-based stats.
 Identities = 231/592 (39%), Positives = 335/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +I
Sbjct: 3   KRTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E             
Sbjct: 63  AETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +L+    +   G  ++  F R+ Y +A+RRYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVMQMGEEMLKK-VVKEVKGVEINGAFPRMTYKEAMRRYGSDKPDTRFEMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++     +F+VF   +  +   +            R   D + E+    G  GLA++ 
Sbjct: 301 DVSQLGRDMDFKVFKDTVENDGEIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+ +     N E +      + GD   F+A  P          R  +
Sbjct: 361 VVED-----GLTGPIGRFFETENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A 
Sbjct: 416 AKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +PS VS +QL EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPSEVSDKQLEELSLRIR 587


>gi|149911273|ref|ZP_01899895.1| Putative aspartyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805658|gb|EDM65658.1| Putative aspartyl-tRNA synthetase [Moritella sp. PE36]
          Length = 592

 Score =  618 bits (1594), Expect = e-175,   Method: Composition-based stats.
 Identities = 215/594 (36%), Positives = 333/594 (56%), Gaps = 8/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG +  + +G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  FE A 
Sbjct: 2   RTVYCGQVNETHIGQQVVLCGWVNRRRDLGGVIFIDLRDREGIVQVVYDPDLADVFERAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R E+ + I G V +R    IN ++ TG +E+S  ++E+ + A+   LP+   +   E 
Sbjct: 62  QLRQEFCVKITGKVRARDERQINKDMATGGVEISGLELEVFNKAD--ILPLDFNQTNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYRFLDLRR  +   +  R ++ + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRFLDLRRPEMSNRLKTRAKVSSFVRRFMDDHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRTHKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +    E+++  +++E  +    +  F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSAAQVREVTESLVTNMWKEILDVELPA--FPSMTYAEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G   +R   D   ++    G  G+A++  + 
Sbjct: 297 DLLKDVEFKVFAEPANNPKGRVAVLCVTGGAKLSRKQIDEYTKFVGIYGAKGMAWMKVKD 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L+     A+  R + +DGD  FF A             R  +  +
Sbjct: 357 VAAGAEGVQSPVAKFLSADVITALLERTNAKDGDIIFFGADTNKVVTEALGALRLKVGVD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + N ++  W++DFP +E +EE   +   H+PFT P     +    +  +  +  YD
Sbjct: 417 LELTS-NEWKPLWVVDFPMFEEDEE-GNLHAVHHPFTAPMDVNAAELLANPANAISDAYD 474

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H  E+    F  +GI  +  +++FG L  A + G PPH G+A G+
Sbjct: 475 MVINGYEVGGGSVRIHKGEMQKAVFEILGIEDKEQQDKFGFLLEALKYGTPPHAGLAFGL 534

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+ MLL G  N+R+V  FP +     LL  +PS  +   L EL + +V+  KK
Sbjct: 535 DRLTMLLTGTDNIRDVIAFPKTTTAACLLTSAPSEANPASLEELSIAVVKKEKK 588


>gi|163791444|ref|ZP_02185853.1| aspartyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873308|gb|EDP67403.1| aspartyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 589

 Score =  618 bits (1594), Expect = e-175,   Method: Composition-based stats.
 Identities = 226/592 (38%), Positives = 335/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +    +G  + L GWV + R  G +IF+D+RD  GI Q+V NP        I
Sbjct: 3   KRTEYCGKVSRDLLGQEIVLKGWVQKRRDLGDLIFIDLRDREGIVQIVFNPTFSKEALAI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+VL I G V+ R+A  +N NI TG++E+    + +L+ ++  P  +       
Sbjct: 63  AEDIRSEFVLEIKGKVVERNAAVVNKNIPTGELEVEVYDVTVLNTSKTTPFYIEDGVAVS 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N++ R ++  S+R  +   NFI+  TP LT S+PEGARD+L
Sbjct: 123 DDKRMQYRYLDLRRPEMTQNMILRHQMTKSIRHYLDDHNFIDTETPYLTKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQ+LM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRVHPGHFYALPQSPQLFKQMLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+E ++I +  E +L  V ++      ++  F R+ YD+AI RYG+DKPD+R  + + +
Sbjct: 242 SFLEPEEIQSFTEELLAKVLKDTKGVE-LTLPFPRMGYDEAISRYGSDKPDVRFGLELVD 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V+     S F+VFS  +      +           +R   D + E+    G  GLA++  
Sbjct: 301 VSALVKDSSFKVFSGAVENGGAVKAINAKGAASNYSRKDIDALGEFVSVYGAKGLAWLKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK        A+  ++  + GD   F+A             R+ + 
Sbjct: 361 EED-----GLKGPIAKFFKDD-AAALIEKMGAETGDLLLFVADQKSVVHDSLGALRSKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL +I+ + + F WI+D+P  E+++E K+   AH+PFTMP+     L   D   + A  
Sbjct: 415 KELELIDESTYAFLWIVDWPLLEYDDEAKRYTAAHHPFTMPKESDIELLETDPGKVYAQA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +G SKE  E +FG L  A + G PPHGGIA 
Sbjct: 475 YDIVLNGYELGGGSIRIHKRDLQEKMFAALGFSKEEAEEQFGFLLEALEYGFPPHGGIAL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G+DR  MLL G +N+REV  FP +    D L  +PS VS  QL EL +   +
Sbjct: 535 GLDRFAMLLAGKENIREVIAFPKNGKATDPLTSAPSIVSEAQLDELSIHTTK 586


>gi|94272028|ref|ZP_01292054.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [delta
           proteobacterium MLMS-1]
 gi|93450263|gb|EAT01532.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [delta
           proteobacterium MLMS-1]
          Length = 595

 Score =  618 bits (1594), Expect = e-175,   Method: Composition-based stats.
 Identities = 228/598 (38%), Positives = 345/598 (57%), Gaps = 11/598 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACF 59
           +  R+H C  LG   +G  V L GWV R R HGG+IF+D+RD  GITQ+V NP+      
Sbjct: 6   NLKRSHHCNILGREQIGEQVTLMGWVLRRRDHGGVIFIDLRDRRGITQIVFNPEINPEVH 65

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A ++R EWV+ + G V  R A   N  + TG IE+   ++ IL+ ++  P P+  E E
Sbjct: 66  TKAHTLRPEWVVAVRGRVQQRPAGMENPKLTTGAIEVMIDELRILNRSQTPPFPLDEEIE 125

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + +R KYR+LDLRR T+  N+V R +   ++R  +  E+F+E  TP+LT S+PEGARD
Sbjct: 126 VADQLRLKYRYLDLRRPTMAANLVLRHQASQAIRNFLNDEDFLEIETPVLTRSTPEGARD 185

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN G F+ALPQ+PQ +KQLLM +G +RY+QI  CFRDED R+DR P EF Q+D 
Sbjct: 186 YLVPSRVNPGRFFALPQSPQLFKQLLMVAGMERYYQIVRCFRDEDLRADRQP-EFTQVDF 244

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E+SFV+++ ++   E +++ +F+       ++  F R+ Y +A+ R+GTD+PDLR  + +
Sbjct: 245 ELSFVDEEGVMAVAEGMMKNLFKATLGRE-LAPPFPRMTYAEALARFGTDRPDLRFGLEL 303

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358
             +T    +   +VF  ++      +   I AKG    +R   D +  +A   G  GLA+
Sbjct: 304 VEITHVVKNCGLQVFRDVVENGGMVKS--INAKGCAYFSRKDLDDLTAYAGEFGAKGLAW 361

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  + D         P+AK       +A+   L  Q  D  FF+A  P       A+ R 
Sbjct: 362 VKIKEDGQ----WQSPIAKFFTAEEQQAMVEALAAQPADLLFFVADQPTVVHQALAELRL 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+ L +++   F F W+ DFP  E++ E K+    H+PFT P+     L  +D   ++
Sbjct: 418 ELARRLELVSREDFSFVWVTDFPLLEYDAEAKRHAAVHHPFTAPREEDLPLLDSDPGRVR 477

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG EI  G IR H  ++  Q F+ +GI+ E V+++F  L +A + G PPHGG
Sbjct: 478 SRAYDLVLNGNEIGGGSIRIHQPDLQRQVFTALGITPEEVKDKFAFLVQALELGAPPHGG 537

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G+DR++MLL G  ++R+V  FP +Q     L  +P+ V+ +QL EL LR     +
Sbjct: 538 MAFGLDRLLMLLAGCDSIRDVIAFPKTQKATCPLTEAPAPVARKQLTELSLRPDWKEE 595


>gi|312797300|ref|YP_004030222.1| aspartyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312169075|emb|CBW76078.1| Aspartyl-tRNA synthetase (EC 6.1.1.12) [Burkholderia rhizoxinica
           HKI 454]
          Length = 626

 Score =  618 bits (1594), Expect = e-175,   Method: Composition-based stats.
 Identities = 225/597 (37%), Positives = 331/597 (55%), Gaps = 10/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F+ A+
Sbjct: 30  RSEYCGRVTEKLLGQSVSLCGWVHRRRDHGGVIFIDLRDCEGLVQVVCDPDRPDMFKTAE 89

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR E+ + + G+V +R   T+NAN+ +GQIE+   ++ +L+V+   P  +  E    E+
Sbjct: 90  GVRHEFCVRVVGIVRARPEGTLNANLTSGQIEVLCHELTVLNVSVTPPFQLDDENLS-ET 148

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVP
Sbjct: 149 TRLTHRVLDLRRPQMQHNLRLRYRVAMESRKYLDEQGFIDIETPMLTKSTPEGARDYLVP 208

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 209 SRVNAGMFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 267

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I +  E ++R VF+   +   +++ F  + + +A+RR+G+DKPDLR  +    +T
Sbjct: 268 LNEQEIRDLFEAMIRHVFKTTIDVE-LADPFPVMQHAEAMRRFGSDKPDLRVKLEFTELT 326

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D   ++ R  G  GLA+I    
Sbjct: 327 DVMKDVDFKVFSTPANTKDGRVAALRVPNGAELTRGDIDGYTDFVRIYGAKGLAWIKVNE 386

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+L+     AI  R   QDGD  FF A             R  I   
Sbjct: 387 VAKGRDGLQSPIVKNLHDACIAAILERTGAQDGDILFFGADRAKVVNDSLGALRLKIGHS 446

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              ++ G++    ++  W++DFP +E+++E+ +   AH+PFT P+         D     
Sbjct: 447 AFGRDAGLV-EQGWKPLWVIDFPMFEYDDEDNRWVAAHHPFTSPKDEHLEYLEVDPGRCL 505

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R H  +V  + F  + I  E    +FG L  A Q G PPHGG
Sbjct: 506 AKAYDMVLNGWEIGGGSVRIHREDVQSKVFRALKIGPEEARAKFGFLLDALQYGAPPHGG 565

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIV ++ GA ++R+V  FP +Q    LL  +PS V   QLR+L +R+    
Sbjct: 566 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQCLLTQAPSEVDERQLRDLHIRLRNAE 622


>gi|78485235|ref|YP_391160.1| aspartyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|97196985|sp|Q31H87|SYD_THICR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78363521|gb|ABB41486.1| aspartyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 596

 Score =  618 bits (1593), Expect = e-175,   Method: Composition-based stats.
 Identities = 232/592 (39%), Positives = 342/592 (57%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG +        V +SGWVHR R HGG+IF+D+RD  G+ QVV NPD+   F IA+
Sbjct: 3   RTHYCGQVTEILENQQVTVSGWVHRRRDHGGVIFIDLRDREGLVQVVVNPDNAEMFAIAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL ++G V +R+ ETIN  + TG+IE+ A+ +E+LS AE +P     ++   E 
Sbjct: 63  RVRSEYVLKVEGKVCARTPETINPKMNTGKIEIVAESLEVLSSAEPIPFQ-LDDKHISEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R  YR+LDLRR+ +   +  R R+  SMR  +    F++  TPILT S+PEGARD+LVP
Sbjct: 122 VRLTYRYLDLRREEMQSTMRTRYRVTRSMRRYLDDNGFMDMETPILTKSTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR +   F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF QLD+E SF
Sbjct: 182 SRTHPNKFFALPQSPQLFKQLLMMSGFDRYYQITRCFRDEDLRADRQP-EFTQLDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++++N ME + + +F E  + N   ++F R+ Y +AI +YG D+PDLR P+ + +V 
Sbjct: 241 MTEEEVMNMMEGLTKTIFREGVDVNF-EDDFPRMTYAEAIEKYGIDRPDLRIPLQLVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF+       G        +GG  +R   D   ++    G  GLAYI    
Sbjct: 300 DLLQDIDFKVFAGPAKDPMGRVAALRVPQGGKLSRKEIDDYTKYVGIYGAKGLAYIKVND 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K       E I  R+  +DGD  FF A +           R  I ++
Sbjct: 360 LSAGLDGLQSPIVKFFPDQAME-IMQRVGAEDGDIVFFGADNAKIVNEALGALRCKIGED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND-LLSIKAFQY 482
           L +I    +   W++DFP +E +E+  K+   H+PFT P+   E +  +D    + +  Y
Sbjct: 419 LDMIEKE-WAPVWVVDFPMFEMDEKTAKMTAIHHPFTQPKATTEEILNHDEPHQMLSRAY 477

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+  G +R H + +       +GIS E  + +FG L  A + G PPH G+A G
Sbjct: 478 DLVINGIEVGGGSVRIHDTHMQAAVLKMLGISDEDAQEKFGFLLNALKYGCPPHAGMAFG 537

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+VML+    ++R+V  FP +Q+   +L  +P  V   QL +L LR  ++
Sbjct: 538 LDRLVMLMAKRDSIRDVIAFPKTQSAACMLTDAPGNVDNTQLADLELRFRKS 589


>gi|325262052|ref|ZP_08128790.1| aspartate--tRNA ligase [Clostridium sp. D5]
 gi|324033506|gb|EGB94783.1| aspartate--tRNA ligase [Clostridium sp. D5]
          Length = 594

 Score =  618 bits (1593), Expect = e-174,   Method: Composition-based stats.
 Identities = 231/594 (38%), Positives = 346/594 (58%), Gaps = 10/594 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EI 61
            RTH CG+L  +++G  V + GWV + R  GGI+F+D+RD  GI Q+V   D      + 
Sbjct: 9   KRTHRCGELSSANIGEMVTVMGWVQKNRNKGGIVFVDLRDRSGILQIVFEGDDKAALIDK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+V+ + G V +RS   +N N+ TG+IE+ A+++ ILS +E  P P+    +  
Sbjct: 69  AAKLRSEFVIAVVGKVEARSG-AVNENLATGEIEIRAEELRILSESETPPFPIEENSKTK 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L +N++ R++I    R  +  E F+E  TPIL  S+PEGARD+L
Sbjct: 128 EELRLKYRYLDLRRPDLQRNLMMRSQIATLTRQFLSDEGFLEIETPILGKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ GSFY LPQ+PQ +KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME+
Sbjct: 188 VPSRVHPGSFYGLPQSPQLFKQLLMCSGYDRYFQIAKCFRDEDLRADRQP-EFTQIDMEL 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE DD+++  E +L  +F+E  +   V+    R+ + +A+ RYG+DKPD R  + + +
Sbjct: 247 SFVEVDDVIDVNERLLVKLFKEVLDVE-VALPIPRMTWQEAMDRYGSDKPDTRFGMELVD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VTE     +F VF   +             +GG   R   D++ ++A+  G  GLAYI  
Sbjct: 306 VTEVVKGCDFVVFKGAIENGGTVRGINAKGQGG-MPRKKIDKLVDFAKDFGAKGLAYIAL 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D     +     AK +     + +   +  + GD   F A           + R  IA
Sbjct: 365 QEDG----SMKSSFAKFMTEEEMQGLVQAMSGEPGDLLLFAADRNKVVWDVLGNLRLEIA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +++ I++ N ++F WI +FP  EW++E+ +    H+PFTMP         +D   ++A  
Sbjct: 421 RQMEILDKNEYKFAWITEFPLLEWSDEQNRFMAMHHPFTMPMEEDLQYIDSDPGRVRAKA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R   ++V  + F  +G +KE    +FG L  AF+ G+PPH G+A 
Sbjct: 481 YDIVLNGNEIGGGSVRIFQNDVQEKMFEVLGFTKEQAYEQFGFLLDAFKYGVPPHAGLAY 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR+VML+    ++R+V  FP  ++   L+  +PS V  +QL ELGL +    
Sbjct: 541 GLDRMVMLMAKEDSIRDVMAFPKVKDASCLMTEAPSLVDEKQLGELGLELQSAE 594


>gi|56460197|ref|YP_155478.1| aspartyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|62287527|sp|Q5QYV2|SYD_IDILO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56179207|gb|AAV81929.1| Aspartyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 589

 Score =  618 bits (1593), Expect = e-174,   Method: Composition-based stats.
 Identities = 206/595 (34%), Positives = 331/595 (55%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RTH CG +     G  V L GWV++ R  GG+IF+D+RD  G+ QVV +PD    FE A 
Sbjct: 2   RTHYCGQINAELAGQEVTLCGWVNKRRDLGGLIFIDLRDREGLLQVVFDPDQKALFETAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R E+ + + G V  R    +N N+ TG++EL A  +EI S +E   LP+   ++  E 
Sbjct: 62  SLRQEFCVRLSGKVNRRPESQVNKNMATGEVELLATDLEIFSRSEP--LPIDFNQQVSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  +++ +  R ++ +++R       F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLRYRYLDLRRPQMNEKLQFRAKVTSAVRRFFDDNGFLDIETPMLTRATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRTHKGRFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E + R +F++  + +     F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSAEQVMEITEQMARDLFKQLLDVDLGE--FPSMTWHEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +          +P +    +R   D   ++    G  GLA+I   
Sbjct: 297 DVLKDVEFKVFSGPANDEEGRVAAIRLPGQAENVSRKMIDEYTQFVGIYGAKGLAWIKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +G      PV K L     E +  R+  + GD  FF +             R  + +
Sbjct: 357 DRSAGREGLQSPVLKFLPDEVIEPLLERMQAETGDVLFFGSDKSHVVAEALGALRLKLGK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +  +++ N ++  W++DFP +E  ++   +   H+PFT P          +  +  +  Y
Sbjct: 417 DFELVS-NEWKPLWVVDFPMFEVADD-GSLAALHHPFTAPVNVTPEELKANPAAAISNAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R H + +    F  +GI K+  + +FG L  A + G PPH G+A G
Sbjct: 475 DMVLNGVELGGGSVRIHENAMQQAVFEVLGIEKDEAQEKFGFLLEALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VML++GA ++R+V  FP +     +L  +P   +   L+ELG++ +    +
Sbjct: 535 LDRLVMLMVGASSIRDVIAFPKTTTAACVLTDAPGAANPAALQELGVKSIVKEDE 589


>gi|328957465|ref|YP_004374851.1| aspartate--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673789|gb|AEB29835.1| aspartate--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 589

 Score =  618 bits (1593), Expect = e-174,   Method: Composition-based stats.
 Identities = 227/592 (38%), Positives = 336/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +    +G  + L GWV + R  G +IF+D+RD  GI Q+V NP        I
Sbjct: 3   KRTEYCGKVSRDLLGQEIILKGWVQKRRDLGDLIFIDLRDREGIVQIVFNPTFSKEALAI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VRSE+VL + G V+ R    +N NI TG++E+    +++L+ ++  P  +       
Sbjct: 63  AEDVRSEYVLEVKGKVVERKEAVVNKNISTGELEVEVYDVKVLNASKTTPFYIEDGVAVS 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N++ R ++  S+R  +   NFI+  TP LT S+PEGARD+L
Sbjct: 123 DDKRMQYRYLDLRRPEMTQNMILRHQMTKSIRHYLDDRNFIDTETPYLTKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRVHPGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+E ++I +  E +L  V ++  +   ++  F R+ YD+AI RYG+DKPD+R  + + +
Sbjct: 242 SFLEPEEIQSFTEELLAKVLKDTKDVE-LTLPFPRMGYDEAISRYGSDKPDVRFGLELVD 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V++    S F+VFS  +      +           +R   D + E+    G  GLA++  
Sbjct: 301 VSDLVKDSSFKVFSGAIENGGAVKAINAKGAASNYSRKDIDALGEFVSVYGAKGLAWLKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK       EA+  +++ + GD   F+A             R+ + 
Sbjct: 361 EDD-----GLKGPIAKFFKED-AEALIEKMEAETGDLLLFVADKKSVVHDSLGALRSKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL +I+ + + F WI+D+P  E++EE  +   AH+PFTMP+     L   D   + A  
Sbjct: 415 KELELIDESVYAFMWIVDWPLLEYDEEAGRYSAAHHPFTMPKESDIDLLETDPGKVYAQA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +G SKE  E +FG L  A   G PPHGGIA 
Sbjct: 475 YDIVLNGYELGGGSIRIHTRDLQEKMFTALGFSKEEAEEQFGFLLEALDYGFPPHGGIAL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G+DR  MLL G +N+REV  FP +    D L  +PS VS  QL EL +   +
Sbjct: 535 GLDRFAMLLAGKENIREVIAFPKNGKATDPLTSAPSLVSEAQLDELSIHTTK 586


>gi|326318349|ref|YP_004236021.1| aspartyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323375185|gb|ADX47454.1| aspartyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 604

 Score =  618 bits (1593), Expect = e-174,   Method: Composition-based stats.
 Identities = 226/599 (37%), Positives = 337/599 (56%), Gaps = 13/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG +  + +G  V L+GWV+R R HGG+IF+D+RD  G  QVV +PD    F+ A+
Sbjct: 4   RSHYCGLVTEALMGQTVTLAGWVNRRRDHGGVIFIDLRDREGNVQVVCDPDRADMFKTAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + I GLV +R   T N N+ +G+IE+   ++ +L+ +   P  +  E    E+
Sbjct: 64  GVRNEFCVQIKGLVRARPEGTTNDNLKSGKIEVLCHELNVLNPSVTPPFQMDDENLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + +N++ R +    +R  +  E FI+  TP+L  S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPYMQRNLMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ YKQ+LM +G+DRY+QI  CFRDED R+DR P EF Q+D E SF
Sbjct: 183 SRVHDGQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQP-EFTQIDCETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    + ++  VF+   + +     F  + Y DA  R+G+DKPDLR  +    +T
Sbjct: 242 LGEEEIRAIFQRMVTEVFKTQLDVDLGE--FPIMTYQDAAFRFGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKG----GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +     +F+VFS   ++  G  V      G    GG +R   D   E+ +  G  GLAYI
Sbjct: 300 DVMKDVDFKVFSGAANMQGGRVVALRVPGGAREEGGLSRGEIDAYTEFVKIYGAKGLAYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G      P+ K+++      I  R   Q GD  FF A             R  
Sbjct: 360 KVNDLAKGRDGLQSPIVKNIHDAAIAEILKRTGAQSGDLLFFGADKLKVVNDAIGALRLK 419

Query: 420 IAQ-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           I   E G  N    N +   W++DFP +E++E++ +    H+PFT P+ G E L   D  
Sbjct: 420 IGHSEFGKKNGLFENVWAPLWVVDFPMFEYDEDDARWVAVHHPFTAPKDGHEDLMDTDPG 479

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              A  YD+V NG+E+  G +R H +EV  + F+ + ++ E    +FG L  A Q G PP
Sbjct: 480 RCIAKAYDMVLNGWELGGGSVRIHRAEVQSKVFAALKLTPEDARAKFGYLLDALQYGAPP 539

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           HGG+A G+DR++ L+ GA+++R+V  FP +Q   DLL  +PS V  +QLREL +R+   
Sbjct: 540 HGGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLRNP 598


>gi|299768800|ref|YP_003730826.1| aspartyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298698888|gb|ADI89453.1| aspartyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 594

 Score =  618 bits (1593), Expect = e-174,   Method: Composition-based stats.
 Identities = 239/594 (40%), Positives = 336/594 (56%), Gaps = 9/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG L  + +   V L GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYPE 122
             RSE+VL I G V  R   T NAN+++GQIE+  + IE+L+ +E  P P+  E     E
Sbjct: 63  KARSEYVLKITGRVRRRYEGTENANMVSGQIEVLGKDIEVLAASETPPFPLNDENTNISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLD+RR  +   +  R+++ N +R       F++  TPILT ++PEGARD+LV
Sbjct: 123 EIRLKYRFLDIRRPEMLDRLRFRSKLTNLIRNYFEDNGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQP-EFTQIDVETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  DDI++ ME +   +F+E          F R+ Y DA+R Y +DKPD+R P+ + +V
Sbjct: 242 FMSDDDIMDLMEVLTVKMFDELLGVKFDK--FQRMTYADAMRDYASDKPDMRIPLKLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+       G  V           R+  D   ++    G  GLAYI   
Sbjct: 300 ADLMQEVEFKVFAGPAKDPKGRIVALRVPGAASLPRSAIDEYTKFVGIYGAKGLAYIKVN 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K +  +  E +  R+  QDGD  FF A             R  I  
Sbjct: 360 ELAKGIEGLQSPIVKFIEPIVLE-LLARVGAQDGDIVFFGADKAKVVNDAMGALRVKIGH 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +  C  +   W++DFP +E  ++  K    H+PFT+P+  +E +K ++     +  Y
Sbjct: 419 DLNLATCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTLPKSSVEEVK-SNPGEALSVAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R +  E+    F  +GIS E  E +F  L  A + G PPHGG+A G
Sbjct: 476 DMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGGLAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR+VML+ GA ++R+V  FP ++     L  +P+ V   QLR+LG+R+ E PK
Sbjct: 536 LDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREKPK 589


>gi|15606775|ref|NP_214155.1| aspartyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|3915067|sp|O67589|SYD_AQUAE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2984003|gb|AAC07548.1| aspartyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 603

 Score =  618 bits (1593), Expect = e-174,   Method: Composition-based stats.
 Identities = 229/604 (37%), Positives = 345/604 (57%), Gaps = 23/604 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG++   D+G  V+L+GWVHR R HGG+IF+D+RD  GI QVV     +   +E+
Sbjct: 9   KRTKYCGEVSEEDIGKEVKLAGWVHRKRHHGGVIFIDLRDREGIVQVVVEEKTNPEAYEV 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  ++SE+V+ + G V  R   T N  + TG +E+ A +I + + +E LP PV  E    
Sbjct: 69  ADKLKSEYVIGVVGKVRKRPEGTENPKLKTGYVEVVADRILVFNTSEALPFPVEEETHVS 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  + KYR++DLRR+++  N++ R R+    R     E FIE  TP LT S+PEGARDFL
Sbjct: 129 EETKLKYRYIDLRRESMKNNLIFRHRVYQITRNFFTKEGFIEIETPFLTKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ G FYALPQ+PQ +KQ+LM +GFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 189 VPSRLHPGKFYALPQSPQLFKQILMIAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDYEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV ++++++  E ++  +F+E      +   F RI Y +A+ +YGTDKPD R  + +  
Sbjct: 248 SFVSEEEVMDVAERLIATLFKELLGVE-LKTPFERISYREAMEKYGTDKPDRRFGLELIE 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+ F ++ F+VF  ++      +  AI  KG   +R   D + ++ +S G  GLA+I  
Sbjct: 307 LTDIFKNTAFKVFKSVVEAGGIIK--AINFKGSNLSRKEIDELTKFVQSLGAKGLAWIKV 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D         P+ K      T+ +  R   + GD   F A           + R H+ 
Sbjct: 365 EKD-----KLTSPIVKFFTEEETQKLLERTKAEPGDVILFSADKKEMVYKILGNLRLHLG 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND-------- 473
           ++  +I+ + ++  WI+DFP  EW+EEE++    H+PFTMP+                  
Sbjct: 420 KKYKLIDESKWDVFWIVDFPLMEWDEEEERFVSLHHPFTMPREENIPKLKEALEEEDLEK 479

Query: 474 ----LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
               + S++A  YD+V NG EI  G IR H  ++    F  +GI +   + +FG L  A 
Sbjct: 480 KKEIVHSVRARAYDMVLNGEEIGGGSIRIHRRDIQEVVFKLLGIGEVEAQEKFGFLLEAL 539

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGG+A G+DR+V L+LG  ++R+   FP +Q     L G+P  V  +QL+EL +
Sbjct: 540 KYGAPPHGGLAFGLDRVVALMLGLDSIRDTIAFPKTQRGICPLTGAPDYVDPKQLKELHI 599

Query: 590 RIVE 593
           +++E
Sbjct: 600 KVLE 603


>gi|84499750|ref|ZP_00998038.1| aspartyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84392894|gb|EAQ05105.1| aspartyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 636

 Score =  618 bits (1593), Expect = e-174,   Method: Composition-based stats.
 Identities = 322/639 (50%), Positives = 416/639 (65%), Gaps = 47/639 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C +L   +VG  VRLSGWVHR+R HGG++F+D+RDHYG+TQV+ +PDS  F 
Sbjct: 1   MHAYRSHTCAELTAVNVGQTVRLSGWVHRIRDHGGVLFIDLRDHYGVTQVLCDPDSPVFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VRSEW + IDG V +R    +N  I TG+IE+  + +E+L  A+ELPL VFG++EY
Sbjct: 61  EVEKVRSEWCIRIDGEVKARDESLVNPKITTGEIEVFIRDMEVLGAAKELPLIVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R +YR+LDLRR+ + +N+  R+ ++ SMR RM  + F E  TPI+TASSPEGARDF
Sbjct: 121 PEETRLRYRYLDLRREVMQQNMTLRSDVVASMRKRMWDKGFREYQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--FLRICYDDAIRRYGTDKPDLRNPII 298
           MSFV Q D+ +T+  V+ GVFEEF  G  V     + +I Y DA  +YGTDKPDLRNPI 
Sbjct: 241 MSFVTQQDVFDTIAPVIGGVFEEFGGGRKVDAPAEWPQITYADAALKYGTDKPDLRNPIE 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M  V+EHF  S F +F+K+L             KGG  +R FCDRMN +A+ +G PG+ Y
Sbjct: 301 MQVVSEHFRGSGFAIFAKLLEQEGTEIRAIPAPKGG--SRKFCDRMNAFAQKEGLPGMGY 358

Query: 359 IFWRLDE------------------------------------------SGNVAGMGPVA 376
           IFWR  E                                            ++   GP+A
Sbjct: 359 IFWRRTELPSEAKNNPEHPLFQAREQELVAEYGSGYKRYSVEGMPSQEDGSHMEAAGPLA 418

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K++    TEAIR +L +  GD+ FF+ G P  F + A  AR  I  ELG+ +   F F W
Sbjct: 419 KNIGPERTEAIRQQLGLGVGDAAFFLGGKPKSFEAVAGRARTVIGDELGLTDTERFAFAW 478

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I+DFP YE +EE   +DF+HNPF+MPQGG+++L G D L +  +QYDL CNG+EI SG I
Sbjct: 479 IVDFPMYEADEETGAVDFSHNPFSMPQGGLDALSG-DPLEVLGYQYDLACNGYEIISGAI 537

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           RNH  E+M +AF   G  ++ V  RFGG+  AFQ G PPHGG AAG+DRIVMLL    N+
Sbjct: 538 RNHKPEIMFKAFDLAGYGEDEVRKRFGGMVNAFQYGAPPHGGCAAGVDRIVMLLADEDNL 597

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           R+V LFPM+Q   DL+MG+PS    +QL EL LR++   
Sbjct: 598 RDVMLFPMNQRAEDLMMGAPSEPGSDQLMELSLRVIPQE 636


>gi|119504256|ref|ZP_01626336.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119459764|gb|EAW40859.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 592

 Score =  617 bits (1592), Expect = e-174,   Method: Composition-based stats.
 Identities = 228/591 (38%), Positives = 337/591 (57%), Gaps = 7/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG +  SD+ + V L GWV R R HGG+IFLD+RD  GI QVV +PD  + F +A 
Sbjct: 2   RTHYCGLVSESDIDNTVTLYGWVDRRRDHGGVIFLDMRDREGIVQVVFDPDTESAFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+VL I G V +R   TIN  + TG IE+  ++IE+LS +   P P+       E 
Sbjct: 62  RVRTEYVLKITGRVRARGEGTINPAMATGSIEILGKEIELLSESATPPFPLDAHHSVGED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R++DLRR  +  N++ R R+ +S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLKFRYMDLRRPEMQNNLMFRARLTSSIRQYLDGHGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHEGEFFALPQSPQLFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQIDIETSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +E+ DI+   E ++R VF E  N +    +F  + + +A+ RYG+DKPDLR  + + ++ 
Sbjct: 241 LEESDIMTLTEGLVRSVFTEHLNVD--LGDFPHMTWHEAMERYGSDKPDLRIKLELVSID 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS       G         G   +R   D         G  GLA+I    
Sbjct: 299 DLMAGVEFKVFSGPAQDASGRVAALKVDGGAKLSRKEIDDYTRHVSVYGARGLAWIKVNN 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +     + +  RL+ +DGD  FF A             R  +A++
Sbjct: 359 LAQGLEGLQSPILKFMPEEVVQQLMDRLEAKDGDIIFFGADSRKVVNEALGALRLKVAED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG++    +   W++DFP +E N    ++   H+PFT P     +L+ +      +  YD
Sbjct: 419 LGLVEAG-WAPLWVVDFPMFEEN-GNGELTPLHHPFTAPACEEAALRDS-PSEALSRAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H  ++    F  +GI  +    +FG L  A Q G PPHGG+A G+
Sbjct: 476 MVLNGSELGGGSIRIHRPDMQQAVFDVLGIDSDEAAEKFGFLLDALQYGAPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR+V L++G +++R+V  FP +Q+   ++  +P  VS  QLREL +++   
Sbjct: 536 DRLVTLMVGGQSIRDVIAFPKTQSASCVMTEAPGRVSDAQLRELSIKLRRP 586


>gi|298694909|gb|ADI98131.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 588

 Score =  617 bits (1592), Expect = e-174,   Method: Composition-based stats.
 Identities = 231/592 (39%), Positives = 335/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +I
Sbjct: 3   KRTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E             
Sbjct: 63  AETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +L+    +   G  ++  F R+ Y +A+RRYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVMQMGEEMLKK-VVKEVKGVEINGAFPRMTYKEAMRRYGSDKPDTRFEMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++     +F+VF   +  +   +            R   D + E+    G  GLA++ 
Sbjct: 301 DVSQLGRDMDFKVFKDTVENDGEIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+ + L   N E +      + GD   F+A  P          R  +
Sbjct: 361 VVED-----GLTGPIGRFLETENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A 
Sbjct: 416 AKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRIR 587


>gi|291086850|ref|ZP_06344631.2| aspartate--tRNA ligase [Clostridium sp. M62/1]
 gi|291077143|gb|EFE14507.1| aspartate--tRNA ligase [Clostridium sp. M62/1]
          Length = 625

 Score =  617 bits (1592), Expect = e-174,   Method: Composition-based stats.
 Identities = 229/600 (38%), Positives = 350/600 (58%), Gaps = 11/600 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
            R+H C +L   ++G  V + GWV + R  GGIIF+D+RD  G+ Q++          F 
Sbjct: 33  KRSHRCTELSTENIGENVTVMGWVQKSRNKGGIIFVDLRDRSGLLQIIFEEADCGSESFA 92

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ + G V +RS   +N N+ TG IE+ A  + ILS +E  P P+    + 
Sbjct: 93  KAEKLRSEFVIAVTGKVEARSG-AVNENLKTGAIEIRANALRILSESETPPFPIEENSKT 151

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  L KN++ R+R+    R  +  E F+E  TP L  S+PEGARD+
Sbjct: 152 KEELRLKYRYLDLRRPDLQKNLMTRSRVTTLTRAFLAEEGFLEIETPTLIKSTPEGARDY 211

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME
Sbjct: 212 LVPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDME 270

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+L+  E +L+ +F+E    + +     R+ + +A+ R+G+DKPDLR  + + 
Sbjct: 271 LSFVDVDDVLDVNERLLKKLFKEICGFD-LQLPIQRMTWREAMDRFGSDKPDLRFGMELK 329

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+E     +F VF   L             + G   R   D + E+A+  G  GLAY+ 
Sbjct: 330 NVSETVKDCQFVVFKSALENGGSVRGINAEGQAG-MPRKKIDALVEFAKGFGAKGLAYLA 388

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D     +     AK +      A+   +D + GD   F A           + R  +
Sbjct: 389 VLEDG----SYKSSFAKFMTEEELAALVKAMDGKPGDLLLFAADKDKVVFDVLGNLRLEL 444

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L ++  + F+F W+ +FP  E++EE+ +    H+PFTMP     +L   D  +++A 
Sbjct: 445 ARQLDLLKKDDFKFLWVTEFPLLEYSEEQGRFVAMHHPFTMPMEEDLALIDTDPGAVRAK 504

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H S++  + F  +G +KE    +FG L  AF+ G+PPH G+A
Sbjct: 505 AYDIVLNGTEMGGGSVRIHQSDIQSKMFEVLGFTKEQANEQFGFLLEAFKYGVPPHAGLA 564

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DR+VML++GA ++R+V  FP  ++   L+  +PS V  +QL+ELG+ + +  ++  +
Sbjct: 565 YGLDRMVMLMVGADSIRDVIAFPKVKDASCLMTEAPSPVDEKQLKELGIEVSQEEEQKAE 624


>gi|88861321|ref|ZP_01135952.1| aspartate tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88816700|gb|EAR26524.1| aspartate tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 590

 Score =  617 bits (1592), Expect = e-174,   Method: Composition-based stats.
 Identities = 210/595 (35%), Positives = 333/595 (55%), Gaps = 7/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF-EIAK 63
           R+  CG L  + +   V L GW+++ R  GG+IF+D+RD  G+ QVV +P+ A   + A 
Sbjct: 2   RSIYCGQLNKTHLEQTVELCGWINKRRDLGGLIFIDLRDREGVVQVVFDPEVAGLMDTAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V +R    +N+ + TG++E+  + ++I++ +E   LP+   +   E 
Sbjct: 62  QLRNEFCVKVTGIVRARPQSQVNSGMATGEVEILGKGLQIINRSEP--LPLDFNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 MRLKYRYLDLRRIEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    E ++R ++ E  N +    +F  + Y +A+ RYG+DKPDLRNP+ + +V 
Sbjct: 239 MSSDQVREVTEKMIRQMWNELLNVD--LGDFPVMPYYEAMSRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF+   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DLLKDVEFQVFAGPANNPKGRVAAISVPGGAELSRKQIDDYTKFIGIYGAKGLAWMKITD 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L+    EAI  R + Q GD   F A             R  +  +
Sbjct: 357 RTLGAEGVQSPVAKFLSADIIEAILTRTNAQTGDIILFGADKKNIVNEAMGALRIKLGLD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + +   +   W++DFP +E + +E  +   H+PFT P+    +    D  S  +  YD
Sbjct: 417 LNLTDLKAWAPLWVVDFPMFEED-DEGTLHAVHHPFTAPKDMTPAQLEADPASAISDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R   +++   AF  +GI+++  +++FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIFNNDMQATAFRILGINEQEQQDKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           DR+ MLL G  N+R+V  FP +     LL  +PS  + + L+EL + +    K  
Sbjct: 536 DRLTMLLCGTDNIRDVIAFPKTTQASCLLTNAPSIANPDSLKELAVAVSLPTKDA 590


>gi|329768511|ref|ZP_08259999.1| aspartyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836661|gb|EGF86318.1| aspartyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 590

 Score =  617 bits (1592), Expect = e-174,   Method: Composition-based stats.
 Identities = 222/597 (37%), Positives = 342/597 (57%), Gaps = 10/597 (1%)

Query: 1   MHRY-RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSA 57
           M  Y RT   G +    VG  V L GWV + R  G +IF+D+RD  G+ Q V     ++ 
Sbjct: 1   MSAYGRTEYTGRIDEKYVGKKVTLKGWVSKRRDLGNLIFIDVRDRMGVVQCVFSGEKNAE 60

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+A ++R+E+V+ I+G V+ R+  T+N  I +G++E+ A K+EILS A+ LP  +   
Sbjct: 61  LHELAGTLRNEFVVSIEGEVVLRNESTVNEKIASGKVEVIADKLEILSKAKTLPFVLDDA 120

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R KYR+LDLRR  L + +  R++I  + R  +    F++  TPILT S+PEGA
Sbjct: 121 SLSSEELRLKYRYLDLRRTELAEVLHLRSKITKATRDYLDNNMFVDVETPILTKSTPEGA 180

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV+ G FYALPQ+PQ +KQLLM +GFDRY+Q+A CFRDED R+DR P +F Q+
Sbjct: 181 RDYLVPSRVHPGEFYALPQSPQLFKQLLMVAGFDRYYQVARCFRDEDLRADRQP-DFTQI 239

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF+ Q++IL  +E ++  V +E    + V   F R+ Y++A+ R+G+DKPD R  +
Sbjct: 240 DMEMSFMSQEEILTMIEGLIAHVMKEVKGIDVV-LPFPRLDYEEAMERFGSDKPDTRFGM 298

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + +V++   + +F+VFS  +      +           +R   D + ++  + G  GLA
Sbjct: 299 ELKDVSDLVKNLDFKVFSNAVEQGGAVKCIVAKGCAEQYSRKDIDALGKYVANYGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++             G +AK       + +  R+D + GD   F A       +     R
Sbjct: 359 WVKVT-----EEGLNGAIAKFFTDEVAQELVARVDAEVGDIILFAADSKKVCYASLGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A +L +I+ N + + W++++P  E++EE+ +   AH+PFTMP+     L        
Sbjct: 414 QKLAADLDLIDKNKYNYLWVVNWPLLEYDEEKGRYSAAHHPFTMPKVEDVELLETAPEKA 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+E+  G IR +  EV    F  +G ++E  + +FG L  AF+ G+PPHG
Sbjct: 474 YAQAYDIVLNGYELGGGSIRIYDKEVQSSMFKALGFTQEQAQEQFGFLLDAFEYGVPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G A G+DR VMLL G  N+R+   FP + N  D +  +PS V +EQL EL + ++  
Sbjct: 534 GCALGLDRFVMLLAGRDNLRDTIAFPKTANAADPMTQAPSPVDLEQLLELNISLLRK 590


>gi|116872948|ref|YP_849729.1| aspartyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123466329|sp|A0AIW8|SYD_LISW6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116741826|emb|CAK20950.1| aspartyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 591

 Score =  617 bits (1592), Expect = e-174,   Method: Composition-based stats.
 Identities = 226/597 (37%), Positives = 335/597 (56%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT+ CG+L  + +   V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTNYCGELNETHIDQHVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +    
Sbjct: 60  LEIADSVRNEFVVTIKGKVHARGEKAINEKLATGKVEILAEEITILNTSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ ++ I    E++L  V +E          F R+ Y +A+ R+G+DKPD+R  + 
Sbjct: 239 LETSFLTKEKIQAITEDMLIDVVKEAKGITI-EKPFPRMTYKEAMDRFGSDKPDIRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + NV+E     +F+VF   +      +     A     +R   D +  +  + G  GLA+
Sbjct: 298 LQNVSEVVKDVDFKVFQSAIENGGEVKAINAKAAAANFSRKDLDALGIFVSNYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E+G +   GP+AK         ++  L  +DGD   F A       +     RN
Sbjct: 358 LKV---EAGELK--GPIAKFFPEEKALELKAALKAEDGDLLLFAADKADIVAASLGALRN 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++L +IN +   F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + 
Sbjct: 413 KLGKDLNLINEDELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVM 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGG
Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L+I +  
Sbjct: 533 IALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSDAQLDELKLQITKKE 589


>gi|16330502|ref|NP_441230.1| aspartyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2500971|sp|P73851|SYD_SYNY3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|1652993|dbj|BAA17910.1| aspartyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 599

 Score =  617 bits (1592), Expect = e-174,   Method: Composition-based stats.
 Identities = 236/601 (39%), Positives = 354/601 (58%), Gaps = 17/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           RTH CGDL  + +G  V L GWV R R HGG+IFLD+RD  GI Q+ ++PD     + +A
Sbjct: 2   RTHYCGDLRTTHLGETVTLYGWVDRRRDHGGVIFLDLRDRQGIVQIASSPDQTPASYPVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGERE 119
           + +R+E+V+ + G+V  R  E++N  I TG+IE+ A  I +L+   +    V       +
Sbjct: 62  EGLRNEYVVQVTGVVSKRPPESLNEKIPTGEIEIYADSIILLNGVNQQLPFVVSSHEAEQ 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRR  L +N+  R +++ +MR  +   ENF+E  TPILT S+PEGAR
Sbjct: 122 VREDVRLKYRYLDLRRARLSQNLQLRHQVVKAMRRFLEDQENFLEIETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G +YALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGEWYALPQSPQLFKQLLMVAGMDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ Q++IL+  E ++  +F+   N + +   F R+ Y +++ +YG D+PD R  + 
Sbjct: 241 MEMSFMGQEEILDLNEALICHIFKVVKNID-LPRPFPRLTYQESMAKYGNDRPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V++   ++ F+VFS  +S     +   +P      +         + + A   G  G
Sbjct: 300 LVDVSDLLGNTGFKVFSAAVSSGGSIKAIRVPGGNETISNVRIKPGGDLFKEATEAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AYI  R+ ++G +  +G + ++L+    + +      + GD   F AGD        + 
Sbjct: 360 IAYI--RVRDNGEIDTIGAIKENLDEAQVKTLLQLTQAEAGDLLLFGAGDTATVDKSLSR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  + ++LG+I+ +     WI DFP +EWN +EK+ +  H+PFT P          DL 
Sbjct: 418 LRLVLGEQLGLIDPDAINLLWITDFPMFEWNSDEKRFEALHHPFTAPHPDDLG----DLK 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NG EI  G +R +  EV  + F+ +G+S E    +FG L  AF+ G PP
Sbjct: 474 TARAQAYDLVMNGVEIGGGSLRIYQREVQEKVFATIGLSPEEAHEKFGFLLDAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL    ++R+V  FP +Q    LL  +P+ V  +QL+EL +     P
Sbjct: 534 HGGIAYGLDRLVMLLAKEDSIRDVIAFPKTQQASCLLTEAPAAVDKKQLKELSVASTYVP 593

Query: 596 K 596
           K
Sbjct: 594 K 594


>gi|227552624|ref|ZP_03982673.1| aspartate--tRNA ligase [Enterococcus faecium TX1330]
 gi|257896961|ref|ZP_05676614.1| aspartyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293378683|ref|ZP_06624842.1| aspartate--tRNA ligase [Enterococcus faecium PC4.1]
 gi|227178250|gb|EEI59222.1| aspartate--tRNA ligase [Enterococcus faecium TX1330]
 gi|257833526|gb|EEV59947.1| aspartyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|292642723|gb|EFF60874.1| aspartate--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 589

 Score =  617 bits (1592), Expect = e-174,   Method: Composition-based stats.
 Identities = 230/590 (38%), Positives = 331/590 (56%), Gaps = 10/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+     +EIA
Sbjct: 4   RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEINKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G+V  R    +N  + TG+ E+ A +I IL+ A+  P  +  ++   +
Sbjct: 64  DKCRSEYVIEVTGVVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KNI  R     ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E      V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEVRGIE-VTLPFPRMTYDEAMARYGSDKPDTRFEMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E     EF+VF   L      +           +R   D++ ++    G  GLA++   
Sbjct: 302 SETVKEVEFKVFQMALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK +    TEAI    D + GD   F A       +     R  + +
Sbjct: 362 ED-----GLKGPIAKFMG-EATEAIIKATDAEPGDLLMFGADKSEIVAAALGAIRTRLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP+     L   D   + A  Y
Sbjct: 416 ELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKAEDIPLLAEDPAKVYAEAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  E+  +    +G +KE +E +FG L  A   G PPHGGIA G
Sbjct: 476 DIVLNGYELGGGSIRIHTRELQEKVLKTLGFTKEQMEEQFGFLLTALDYGFPPHGGIALG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR  MLL G  N+REV  FP +    D++  +PS VS  QL EL + + 
Sbjct: 536 LDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585


>gi|49483875|ref|YP_041099.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|282904210|ref|ZP_06312098.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282906036|ref|ZP_06313891.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908949|ref|ZP_06316767.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911266|ref|ZP_06319068.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|283958390|ref|ZP_06375841.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|295428205|ref|ZP_06820837.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297590827|ref|ZP_06949465.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|56749412|sp|Q6GG73|SYD_STAAR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|49242004|emb|CAG40701.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|282324961|gb|EFB55271.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327213|gb|EFB57508.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331328|gb|EFB60842.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595828|gb|EFC00792.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790539|gb|EFC29356.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|295128563|gb|EFG58197.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575713|gb|EFH94429.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312437903|gb|ADQ76974.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315195532|gb|EFU25919.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 588

 Score =  617 bits (1592), Expect = e-174,   Method: Composition-based stats.
 Identities = 230/592 (38%), Positives = 334/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +I
Sbjct: 3   KRTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E             
Sbjct: 63  AETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +L+    +   G  ++  F R+ Y +A+RRYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVMQMGEEMLKK-VVKEVKGVEINGAFPRMTYKEAMRRYGSDKPDTRFEMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++     +F+VF   +  +   +            R   D + E+    G  GLA++ 
Sbjct: 301 DVSQLGRDMDFKVFKDTVENDGEIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+ +     N E +      + GD   F+A  P          R  +
Sbjct: 361 VVED-----GLTGPIGRFFEAENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A 
Sbjct: 416 AKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRIR 587


>gi|326622932|gb|EGE29277.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 577

 Score =  617 bits (1592), Expect = e-174,   Method: Composition-based stats.
 Identities = 215/580 (37%), Positives = 323/580 (55%), Gaps = 7/580 (1%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGL 76
           G  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G 
Sbjct: 2   GQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGT 61

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V +R A+ +NA++ TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR 
Sbjct: 62  VRARDAKNVNADMATGEIEVLASSLTIINRADS--LPLDANHVNTEEARLKYRYLDLRRP 119

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ
Sbjct: 120 EMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQ 179

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME +
Sbjct: 180 SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEAL 238

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+ 
Sbjct: 239 VRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELVDVADLLKSVEFAVFAG 296

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
             +   G         G   +R   D    + +  G  GLAYI       G      PVA
Sbjct: 297 PANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVA 356

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K L     +AI  R   QDGD  FF A +           R  + ++L + + + +   W
Sbjct: 357 KFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKDLSLTDEDKWAPLW 416

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           ++DFP +E ++ E  +   H+PFT P+    S          A  YD+V NG+E+  G +
Sbjct: 417 VIDFPMFE-DDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSV 475

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  E+    F  +GI+++    +FG L  A + G PPH G+A G+DR+ MLL G  N+
Sbjct: 476 RIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNI 535

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           R+V  FP +     L+  +PS  +   L ELG+++V+  +
Sbjct: 536 RDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKKAE 575


>gi|300692527|ref|YP_003753522.1| aspartate tRNA synthetase [Ralstonia solanacearum PSI07]
 gi|299079587|emb|CBJ52265.1| aspartate tRNA synthetase [Ralstonia solanacearum PSI07]
          Length = 622

 Score =  617 bits (1591), Expect = e-174,   Method: Composition-based stats.
 Identities = 223/595 (37%), Positives = 329/595 (55%), Gaps = 8/595 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEI 61
           + RT  CG +    +G  V LSGW HR R HGG+IF+D+RD  G+ QVV +PD    F++
Sbjct: 17  QMRTQYCGQVTEQLLGQSVTLSGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEMFKV 76

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+ L + G+V +R   T N N+ +G++E+   ++ +L+ +   P  +  +    
Sbjct: 77  AEGVRNEFCLQVKGVVRARPEGTTNPNLASGKVEVLCHELTVLNASVTPPFQLDDDNLS- 135

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R  +R LDLRR  +  N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+L
Sbjct: 136 ETTRLTHRVLDLRRPQMQYNLRLRYKVAMEVRKYLDAQGFIDIETPMLTKSTPEGARDYL 195

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR N G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+D E 
Sbjct: 196 VPSRTNAGQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDCET 254

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++R VF+   +    +  F  + + +A+ R+G+DKPDLR  +   +
Sbjct: 255 SFLGEQEIRDLFEEMIRTVFKNTMSVELDAT-FPVMEFREAMARFGSDKPDLRVKLEFTD 313

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T      +F+VFS   +   G  V      GG   R   D   ++    G  GLA+I  
Sbjct: 314 LTGVMKDVDFKVFSGPANAEGGRVVALRVPGGGALTRGDIDAYTKFVEIYGAKGLAWIKV 373

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G      P+ K+L+      I  R   QDGD  FF A             R  + 
Sbjct: 374 NEVAKGRDGLQSPIVKNLHDAAIAEIIKRSGAQDGDILFFGADRAKVVNDAMGALRLKVG 433

Query: 422 Q-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             E G       + ++  W++DFP +E++EE+ +    H+PFT P+         D    
Sbjct: 434 HSEFGKSTGLFEDAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGKC 493

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+EI  G +R    EV  + F  + I +E    +FG L  A Q G PPHG
Sbjct: 494 IAKAYDMVLNGWEIGGGSVRIFQEEVQSKVFRALKIGEEEARAKFGFLLDALQYGAPPHG 553

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIA G+DRIV ++ GA ++R+V  FP +Q   DLL  +PS V  +QLREL +R+ 
Sbjct: 554 GIAFGLDRIVTMMAGADSIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLR 608


>gi|315126202|ref|YP_004068205.1| aspartate tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315014716|gb|ADT68054.1| aspartate tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 592

 Score =  617 bits (1591), Expect = e-174,   Method: Composition-based stats.
 Identities = 211/592 (35%), Positives = 328/592 (55%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF-EIAK 63
           R+  CG L  + V   V L GW+++ R  GG+IF+D+RD  G+ QVV +P+     E A 
Sbjct: 2   RSIYCGQLNKTHVDQEVELCGWINKRRDLGGLIFVDLRDREGLVQVVFDPEVEGLMETAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R E+ + + G+V +R    +N ++ TG++E+    + I++ +E +  P+   +   E 
Sbjct: 62  KLRQEFCVQLKGIVRARPDSQVNKDMATGEVEILGTGLTIINRSEPM--PLDFNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 RRLKYRYLDLRRLEMSDRIKLRAKASSFVRRFLDENGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDLETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    E ++R +++   N +    +F  + Y +A+  YG+DKPDLRNP+ + +V 
Sbjct: 239 MSSDQVRGMTEKMIREMWQSLLNVD--LGDFPIMPYSEAMSLYGSDKPDLRNPMKLIDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVLTVPGGASLSRKQLDDYTKFIGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G      P+AK LN      +  R + Q GD   F A             R  I  +
Sbjct: 357 RDAGVEGVQSPIAKFLNEDVITQLLERTNAQTGDIILFGADKRNTVNEAMGALRLKIGID 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I N + +   W++DFP +E + +E  +   H+PFT P+    S    +  +  +  YD
Sbjct: 417 LEITNLDSWAPLWVVDFPMFEED-DEGTLHAVHHPFTAPKDISASELEANPAAAISDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +++   AF  +GI  +  +++FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNADMQEAAFRILGIEAQEQQDKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VMLL G  N+R+V  FP +     LL  +PS  + + L EL + +VE  
Sbjct: 536 DRLVMLLCGTDNIRDVIAFPKTTQASCLLTDAPSKANSDSLTELAISVVEKE 587


>gi|296270026|ref|YP_003652658.1| aspartyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296092813|gb|ADG88765.1| aspartyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 584

 Score =  617 bits (1591), Expect = e-174,   Method: Composition-based stats.
 Identities = 234/598 (39%), Positives = 334/598 (55%), Gaps = 21/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L +  VG  V L+GWV R R HGG++F+D+RD  G  QVV   +    E A  
Sbjct: 3   RTHEAGTLRIDHVGQRVTLAGWVARRRDHGGVVFIDLRDASGTVQVVFREE----EHAHD 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  + TG IE++A ++E+LS +  LP P+ G     E  
Sbjct: 59  LRAEYCVKVTGEVRRRPEGNENPELPTGDIEVAASEVEVLSESAPLPFPIEGSVNVSEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  + + +  R+R        M    F+   TP LT S+PEGARDFLVP 
Sbjct: 119 RLKYRYLDLRRQQVAEALKIRSRATYLAHEVMREHGFVYVETPNLTRSTPEGARDFLVPV 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G++YALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF Q+D EMSFV
Sbjct: 179 RLQPGNWYALPQSPQLFKQLLMVGGLERYYQLARCFRDEDLRADRQP-EFTQIDAEMSFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++DD++   E ++  +++E      +     R+ Y +A+ RYGTDKPDLR  + + ++TE
Sbjct: 238 DEDDVIAVAETLIGRIWKEILGYE-LPTPLPRMSYAEAMARYGTDKPDLRFGVELVDLTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  +EFRVF         Y    +   G    R   D   EWARS+G  GLAY+  + D
Sbjct: 297 YFKGTEFRVFQAP------YVGAVVMPGGASQTRRELDGWQEWARSRGARGLAYVLVKED 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
                   GPVAK+L+      +      Q GD+ FF AG+P         AR  I +  
Sbjct: 351 -----GLAGPVAKNLSERELSGLTAATGAQVGDAIFFSAGEPAAARELLGAARLEIGRRC 405

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKK----IDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           G+I+ + + F W++D P +E   +++         H+PFT P+        +      A 
Sbjct: 406 GLIDESKWSFLWVVDAPMFEPLYDDRGEQIGWTSVHHPFTAPKPEWADNFQDHPGEALAC 465

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD++CNG EI  G IR H +E+  + F  +GISKE  E +FG L  AF+ G PPHGGIA
Sbjct: 466 AYDMICNGMEIGGGSIRIHRAEMQQRVFDVLGISKEEAETKFGFLLEAFKYGPPPHGGIA 525

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
            G DRI MLL G +++R+V  FP + +  D L G+P+ ++ EQ +E G+      +  
Sbjct: 526 FGWDRICMLLAGGESIRDVIAFPKTASGYDPLTGAPTPITPEQRKEAGVDARPKAEPA 583


>gi|261496078|ref|ZP_05992488.1| aspartate--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261308328|gb|EEY09621.1| aspartate--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
          Length = 588

 Score =  617 bits (1591), Expect = e-174,   Method: Composition-based stats.
 Identities = 220/592 (37%), Positives = 335/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S +G  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+ A 
Sbjct: 3   RSHYCGALNRSHLGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEALFKQAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE  + I G V++R    IN  + TG+IE+  + + + + AE   LP+   +   E 
Sbjct: 63  ALRSETCVQIQGEVIARDESQINKEMATGEIEVLVKNLVVYNNAE--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   ME ++ G++++    +     F  + +++A+ R+G+DKPDLRNP+ M +V 
Sbjct: 240 MTAEEVRALMEAMIHGLWKKTLGVD--LGKFPMMTWNEAMTRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G  V      G    R   D   ++    G  GLA++    
Sbjct: 298 DILKSVDFKVFSGPANDPKGRVVALRVPNGAALTRKNIDDYTQFVGIYGAKGLAWLKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN    +A+  RL++Q  D  FF A +     +     R  +  +
Sbjct: 358 MNTGLEGIQSPVAKFLNAEVLKALVKRLNLQKDDIVFFGADNWHVATNAIGALRLKVGND 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ +   ++  W++DFP +E + +E  +   H+PFT P+         D  +  A  YD
Sbjct: 418 LGLTDTTAWKPLWVIDFPMFERD-DEGNLSAMHHPFTSPKELSPEELVQDPENAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    FS +GI++E  + +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFSQQMQQTVFSILGINEEEQKEKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ ML+ G  N+R+V  FP +     L+  +PS  + + L EL +R +   
Sbjct: 537 DRLTMLITGTDNIRDVIAFPKTTAAACLMTEAPSYANPKALEELAIRTIPQE 588


>gi|291550619|emb|CBL26881.1| aspartyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 600

 Score =  617 bits (1591), Expect = e-174,   Method: Composition-based stats.
 Identities = 224/600 (37%), Positives = 340/600 (56%), Gaps = 11/600 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFE 60
            RTH CG+L  ++VG  V + GWV + R  GG++F D+RD  GI QVV      D+A  E
Sbjct: 9   KRTHRCGELSAANVGETVTIMGWVQKNRNKGGLVFTDVRDRSGIIQVVCEEGTTDAAIIE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A S+R+E+V+ + G V  RS   +N  I TG+IE+   ++ +LS ++  P P+    + 
Sbjct: 69  KAASLRAEYVVAVVGKVEKRSG-AVNDKIATGEIEVIPSELRVLSESQTPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LDLRR  L +N+  +++++   R     E F+E  TP+L  ++PEGARD+
Sbjct: 128 KEDIRLKYRYLDLRRPDLQRNLRMKSQVMTLTRQFFSDEGFLEVETPMLGKTTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ GSFY LPQ+PQ YKQLLM SG DRY QIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRIHPGSFYGLPQSPQLYKQLLMCSGVDRYIQIARCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD++   E  L+ +F+E  + + V     R+ + +A+ RYG+DKPDLR  + + 
Sbjct: 247 LSFVDVDDVIEVNEKYLKKLFKEVLDVD-VQLPIQRMTWQEAMNRYGSDKPDLRFGMELK 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++      F VF+  L             +G    R   D++  + +  G  GLAY+ 
Sbjct: 306 DVSDVVKDCGFAVFTGALENGGSVRGINAKGQG-SMPRKKIDKLTAFVKDYGAKGLAYVA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +  E G V      AK +     +A+   +D + GD   F A             R  +
Sbjct: 365 LQ--EDGTVK--SSFAKFMTDEQMDALVKAMDGEPGDLLLFAADKNKVVWDSLGALRVEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +++ N + F WI +FP  EW+EE+ +    H+PFTMP         +D   ++A 
Sbjct: 421 AKQLELLDKNEYRFVWITEFPLLEWSEEQNRFVAMHHPFTMPMEEDIQYIESDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R    ++    F  +G +KE   ++FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIFQDDIQEMMFKALGFTKEQAYSQFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DR+VML+    ++R+V  FP  ++   L+  +P+  S +QL EL L +    + + +
Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKIKDASCLMTEAPTPASEKQLEELSLAVEAQEETVEE 600


>gi|320120308|gb|EFE28550.2| aspartate--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 592

 Score =  617 bits (1591), Expect = e-174,   Method: Composition-based stats.
 Identities = 243/590 (41%), Positives = 350/590 (59%), Gaps = 11/590 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
            RT+ C DL +S V   V L GWV R R  GG+IFLD+RD  GI QV  + +     F  
Sbjct: 8   KRTNYCNDLTMSFVEKEVVLMGWVQRARDLGGLIFLDLRDRTGIVQVAFDINDSAENFSK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK + SE+V+ I G+V  RS++  N NI TG IE+ A+++ IL+ A+  P+ +  +    
Sbjct: 68  AKELGSEYVIAIRGVVKERSSK--NNNIATGDIEVFAKELRILNTAKTPPIYIKDDDIVS 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLR+  +  N + R ++  S+R  +  E F+E  TPILT  +PEGARD+L
Sbjct: 126 EDLRLKYRYLDLRKPKMQYNFLMRHKVTQSVRNFLSKEGFLEIETPILTKPTPEGARDYL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN+G FYALPQ+PQ +KQLLM SG DRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 186 VPSRVNKGHFYALPQSPQLFKQLLMTSGMDRYFQIAKCFRDEDLRADRQP-EFTQIDCEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE DD+L+  E +++ VF E  N       F R+ + +A+ RYG+DKPD+R    +++
Sbjct: 245 SFVEIDDVLDVTERLMKTVFHEVLNMEI-QTPFKRMKWQEAMDRYGSDKPDIRFGFEIND 303

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V++      F+VF + +          +       +R   D + E A++ G  GLA++  
Sbjct: 304 VSDIVKDCGFKVFDEAVLSGGTVRAINLNGYEAEFSRKSIDALGETAKTYGAKGLAWM-- 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R+ ESG      P+AK L+     +I  ++  + GD   F+A   +   +     R   A
Sbjct: 362 RVTESG---INSPIAKFLSEDVLNSIVEKMGAKKGDLLLFVADKTMTALTSLGHIRLEAA 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++LG+I+ N F F ++++FP YE+NEEE +   AH+PFT P      L  +   ++ A  
Sbjct: 419 KKLGVIDENEFAFLYVVEFPLYEYNEEENRYVAAHHPFTAPIDEDLKLFNSSPENMHAKA 478

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  +V  + F  +G +KE  E +FG L  AFQ G PPHGGIA 
Sbjct: 479 YDIVLNGIELGGGSIRIHTKDVQDKMFEALGFTKEEAEEKFGFLLNAFQYGTPPHGGIAF 538

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR++ML+L   N+REV  FP +QN    +  +P+      L+ELG+ +
Sbjct: 539 GLDRLLMLMLKRDNIREVIAFPKNQNAICPMTEAPAIADKNALQELGIEL 588


>gi|238693264|sp|B4RXE7|SYD_ALTMD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 586

 Score =  617 bits (1591), Expect = e-174,   Method: Composition-based stats.
 Identities = 211/591 (35%), Positives = 335/591 (56%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG++  S +G  V L GWV++ R  GG+IF+D+RD  GI QVV +PD      +A 
Sbjct: 2   RTDYCGNIDSSYIGQEVTLCGWVNKRRDLGGVIFIDLRDREGIVQVVFDPDLPEVLSVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+ + + G V +R    IN ++ TG+IE+    +E+++ A+   LP+   +E  E 
Sbjct: 62  TLRSEFCVKLTGKVRARPEGQINKDMRTGEIEILGTGLEVINKAD--VLPLDWNQENSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  + + +  R ++  ++R  +  E F++  TPILT ++PEGARD+LVP
Sbjct: 120 QRLRYRYLDLRRPVMSQRLQFRAKVTGAVRRFLEEEGFLDIETPILTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D+E +F
Sbjct: 180 SRTHKGEFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETTF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++ D +++  E ++R +F +  + +    +F R+ Y +A++R+G+DKPDLRNP+ + +V 
Sbjct: 239 LDADGVMSITERMIRDLFNKMLDVD--LGDFPRMTYAEAMKRFGSDKPDLRNPLELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + +F+VFS   +   G         G   +R   D   ++    G  GLA+I    
Sbjct: 297 DLLANVDFKVFSGPANDPKGRVAAIRVPGGASLSRKQIDEYTKFVGIYGAKGLAWIKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K L    T AI  R   Q GD   F A             R  + ++
Sbjct: 357 AGAGLEGLQSPILKFLTEDITNAILERTGAQSGDILLFGADSYTVVTEAMGALRLKLGED 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    ++  W++DFP +E  E + ++   H+PFT P+G        +     +  YD
Sbjct: 417 FELL-EGEWKPLWVVDFPMFE--EFDGQLHAIHHPFTAPRGLTPDELKANPAEALSDAYD 473

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  ++    F+ +GI  E  +N+FG L  A + G PPH G+A G+
Sbjct: 474 MVLNGVELGGGSVRIHNEDMQSTVFNILGIDDEEAKNKFGFLLDALRFGAPPHAGLAFGL 533

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR+VML+ GA ++R+V  FP +      L  +PS  + +QL EL +  V+ 
Sbjct: 534 DRLVMLMTGATSIRDVMAFPKTTTAACPLTSAPSPANPQQLEELAIATVKK 584


>gi|323442834|gb|EGB00459.1| aspartyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 588

 Score =  617 bits (1591), Expect = e-174,   Method: Composition-based stats.
 Identities = 230/592 (38%), Positives = 334/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +I
Sbjct: 3   KRTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E             
Sbjct: 63  AETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +L+    +   G  ++  F R+ Y +A+RRYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVMQMGEEMLKK-VVKEVKGVEINGAFPRMTYKEAMRRYGSDKPDTRFEMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++     +F+VF   +  +   +            R   D + E+    G  GLA++ 
Sbjct: 301 DVSQLGRDMDFKVFKDTVENDGEIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+ +     N E +      + GD   F+A  P          R  +
Sbjct: 361 VVED-----GLTGPIGRFFETENVETLLKLTGAEAGDLVMFVADKPNVVAQSLGALRVKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A 
Sbjct: 416 AKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI 
Sbjct: 536 LGLDRLVMLLTNKTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRIR 587


>gi|261494081|ref|ZP_05990584.1| aspartate--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261310247|gb|EEY11447.1| aspartate--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 588

 Score =  617 bits (1590), Expect = e-174,   Method: Composition-based stats.
 Identities = 220/592 (37%), Positives = 335/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S +G  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+ A 
Sbjct: 3   RSHYCGALNRSHLGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEALFKQAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE  + I G V++R    IN  + TG+IE+  + + + + AE   LP+   +   E 
Sbjct: 63  ALRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNLVVYNNAE--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   ME ++ G++++    +     F  + +++A+ R+G+DKPDLRNP+ M +V 
Sbjct: 240 MTAEEVRALMEAMIHGLWKKTLGVD--LGKFPMMTWNEAMTRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G  V      G    R   D   ++    G  GLA++    
Sbjct: 298 DILKSVDFKVFSGPANDPKGRVVALRVPNGAALTRKNIDDYTQFVGIYGAKGLAWLKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN    +A+  RL++Q  D  FF A +     +     R  +  +
Sbjct: 358 MNTGLEGIQSPVAKFLNAEVLKALVKRLNLQKDDIVFFGADNWHVATNAIGALRLKVGND 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ +   ++  W++DFP +E + +E  +   H+PFT P+         D  +  A  YD
Sbjct: 418 LGLTDTTAWKPLWVIDFPMFERD-DEGNLSAMHHPFTSPKELSPEELVQDPENAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    FS +GI++E  + +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFSQQMQQTVFSILGINEEEQKEKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ ML+ G  N+R+V  FP +     L+  +PS  + + L EL +R +   
Sbjct: 537 DRLTMLITGTDNIRDVIAFPKTTAAACLMTEAPSYANPKALEELAIRTIPQE 588


>gi|15924620|ref|NP_372154.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927210|ref|NP_374743.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|21283309|ref|NP_646397.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49486463|ref|YP_043684.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57650511|ref|YP_186524.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|82751228|ref|YP_416969.1| aspartyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87160735|ref|YP_494281.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|148268110|ref|YP_001247053.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394178|ref|YP_001316853.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221744|ref|YP_001332566.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156979948|ref|YP_001442207.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|161509855|ref|YP_001575514.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221141101|ref|ZP_03565594.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253317218|ref|ZP_04840431.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253732286|ref|ZP_04866451.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733119|ref|ZP_04867284.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255006415|ref|ZP_05145016.2| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257793703|ref|ZP_05642682.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258410998|ref|ZP_05681278.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420201|ref|ZP_05683156.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438203|ref|ZP_05689487.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443666|ref|ZP_05692005.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258446873|ref|ZP_05695027.1| aspartyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448787|ref|ZP_05696899.1| aspartyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258450544|ref|ZP_05698606.1| aspartyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258453605|ref|ZP_05701583.1| aspartyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262048623|ref|ZP_06021506.1| aspartyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051280|ref|ZP_06023504.1| aspartyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269203255|ref|YP_003282524.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893134|ref|ZP_06301368.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282920179|ref|ZP_06327904.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282928265|ref|ZP_06335870.1| aspartyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|284024686|ref|ZP_06379084.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294848659|ref|ZP_06789405.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295406751|ref|ZP_06816556.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296275915|ref|ZP_06858422.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297207650|ref|ZP_06924085.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245666|ref|ZP_06929531.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300911732|ref|ZP_07129175.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380773|ref|ZP_07363441.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|54039654|sp|P67015|SYD_STAAN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|54039655|sp|P67016|SYD_STAAW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|54042026|sp|P67014|SYD_STAAM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56749383|sp|Q6G8T9|SYD_STAAS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62287514|sp|Q5HFD3|SYD_STAAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|97196899|sp|Q2FG97|SYD_STAA3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|97196906|sp|Q2YT75|SYD_STAAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225433|sp|A7X344|SYD_STAA1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|172048921|sp|A6QHH2|SYD_STAAE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189082145|sp|A6U298|SYD_STAA2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189082146|sp|A5ITF4|SYD_STAA9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189082147|sp|A8Z2F7|SYD_STAAT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|13701428|dbj|BAB42722.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14247402|dbj|BAB57792.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204749|dbj|BAB95445.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49244906|emb|CAG43367.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57284697|gb|AAW36791.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|82656759|emb|CAI81188.1| aspartyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87126709|gb|ABD21223.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|147741179|gb|ABQ49477.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946630|gb|ABR52566.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374544|dbj|BAF67804.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156722083|dbj|BAF78500.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368664|gb|ABX29635.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253724075|gb|EES92804.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728875|gb|EES97604.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257787675|gb|EEV26015.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257840148|gb|EEV64612.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843912|gb|EEV68306.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848247|gb|EEV72238.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851072|gb|EEV75015.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257854448|gb|EEV77397.1| aspartyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858065|gb|EEV80954.1| aspartyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257861702|gb|EEV84501.1| aspartyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257864336|gb|EEV87086.1| aspartyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259160917|gb|EEW45937.1| aspartyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259163270|gb|EEW47829.1| aspartyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262075545|gb|ACY11518.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269941115|emb|CBI49501.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|282590072|gb|EFB95154.1| aspartyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282594527|gb|EFB99512.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282764452|gb|EFC04578.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285817312|gb|ADC37799.1| Aspartyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294824685|gb|EFG41108.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294968498|gb|EFG44522.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296887667|gb|EFH26565.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297177317|gb|EFH36569.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300885978|gb|EFK81180.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302333303|gb|ADL23496.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302751458|gb|ADL65635.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340710|gb|EFM06642.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312830016|emb|CBX34858.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315129914|gb|EFT85904.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315198670|gb|EFU28998.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140483|gb|EFW32337.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320144022|gb|EFW35791.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329314304|gb|AEB88717.1| Aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329727425|gb|EGG63881.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
 gi|329733124|gb|EGG69461.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 588

 Score =  617 bits (1590), Expect = e-174,   Method: Composition-based stats.
 Identities = 230/592 (38%), Positives = 334/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +I
Sbjct: 3   KRTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E             
Sbjct: 63  AETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +L+    +   G  ++  F R+ Y +A+RRYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVMQMGEEMLKK-VVKEVKGVEINGAFPRMTYKEAMRRYGSDKPDTRFEMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++     +F+VF   +  +   +            R   D + E+    G  GLA++ 
Sbjct: 301 DVSQLGRDMDFKVFKDTVENDGEIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+ +     N E +      + GD   F+A  P          R  +
Sbjct: 361 VVED-----GLTGPIGRFFETENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A 
Sbjct: 416 AKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRIR 587


>gi|157803333|ref|YP_001491882.1| aspartyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166225384|sp|A8EXL4|SYD_RICCK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157784596|gb|ABV73097.1| aspartyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 602

 Score =  617 bits (1590), Expect = e-174,   Method: Composition-based stats.
 Identities = 309/605 (51%), Positives = 422/605 (69%), Gaps = 10/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           MH+YRTH+C  L +SDVG  V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 1   MHKYRTHNCNALQISDVGKEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNLQLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+A  +R E V+ + G V++RS +TIN  + TG IE+ A++  + S A+ LP  +  E++
Sbjct: 61  EMASRLRYESVITVIGKVVARSGDTINDTLTTGHIEILAREFIVESAADTLPFVINTEKD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE +R K+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 121 APEDLRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTARGFTEFQTPILTASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRMHSGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++       F+RI Y++++ +YG+DKPDLRNPII+
Sbjct: 241 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFIRIPYNESMLKYGSDKPDLRNPIII 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTE F  S+F +F + +           P K     R+F D+M E+A S+G  GL YI
Sbjct: 301 ADVTEIFRDSDFTIFRENIKKGSVVRAIPAP-KAAAHARSFFDKMIEFAISEGAGGLGYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +    S N    GPVAK L+    E+++  +++ DGD+ FF++    K    A   R  
Sbjct: 360 QF----SKNDKAKGPVAKFLSPQQLESLKATVNISDGDAVFFVSDKKEKAAKLAGKVRIR 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----NDLL 475
           I+ EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++LK      +LL
Sbjct: 416 ISDELDLLEKDCFKFCWITDFPFYELNEETAKIDFSHNPFSMPQGGLDALKNAKTTAELL 475

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V  RFG + RAF+ G PP
Sbjct: 476 ELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVNKRFGSMIRAFKFGAPP 535

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +P+ V  + L+ELG+ ++ + 
Sbjct: 536 HGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPNYVEDKALKELGIMLLPSA 595

Query: 596 KKILK 600
           +K ++
Sbjct: 596 RKNVE 600


>gi|323440817|gb|EGA98526.1| aspartyl-tRNA synthetase [Staphylococcus aureus O11]
          Length = 588

 Score =  617 bits (1590), Expect = e-174,   Method: Composition-based stats.
 Identities = 230/592 (38%), Positives = 334/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +I
Sbjct: 3   KRTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E             
Sbjct: 63  AETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +L+    +   G  ++  F R+ Y +A+RRYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVMQMGEEMLKK-VVKEVKGVEINGAFPRMTYKEAMRRYGSDKPDTRFEMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++     +F+VF   +  +   +            R   D + E+    G  GLA++ 
Sbjct: 301 DVSQLGRDMDFKVFKDTVENDGEIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+ +     N E +      + GD   F+A  P          R  +
Sbjct: 361 VVED-----GLTGPIGRFFETENVETLLKLTGAEAGDLVMFVADKPNVVAQSLGALRVKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A 
Sbjct: 416 AKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRIR 587


>gi|329893677|ref|ZP_08269811.1| Aspartyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328923604|gb|EGG30916.1| Aspartyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 592

 Score =  617 bits (1590), Expect = e-174,   Method: Composition-based stats.
 Identities = 229/597 (38%), Positives = 338/597 (56%), Gaps = 7/597 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L    +   V L GWV R R HGG+IFLD+RD  GI QVV +PD+   F +A 
Sbjct: 2   RSHLCGVLRSEHIDQTVTLCGWVDRRRDHGGVIFLDVRDRAGIVQVVFDPDTVEAFALAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL I G V +R+  TIN N+ TGQIE+  +++ IL+ AE  P  +       E 
Sbjct: 62  RVRSEYVLKITGRVRARTDATINPNMATGQIEVLGKELVILNQAETPPFQLDEHTSVSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R  YR++DLRR  + + +V R++I +++R  +  + F++  TPILT ++PEGARD+LVP
Sbjct: 122 VRLHYRYMDLRRTEMQQKLVLRSKITSAVRASLEDQGFLDIETPILTRATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 182 SRTHPGQFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIEASF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI+   E ++R +F    N +    +F R+ Y DA+ R+G+DKPDLR P  + +V 
Sbjct: 241 IDESDIMGITETMIRELFSSVLNVD--LGDFPRMTYADAMERFGSDKPDLRIPYELVSVD 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF        G         G   +R   D   ++    G  GLA++    
Sbjct: 299 DLMQQVDFKVFRAPADDPEGRVAALKIDGGAQLSRKAIDDYTDFVGIYGAKGLAWVKVNQ 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +      ++  R+D +DGD  FF AG            R  +  +
Sbjct: 359 LAEGVSGLQSPILKFMPDEIVMSLMERIDAKDGDIVFFGAGKRQMVEESMGALRIKVGHD 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           +G +    +   W++DFP +E   +       H+PFT P    E L+ N      +  YD
Sbjct: 419 MGAV-AARWAPLWVVDFPMFEKAGD-GSWTALHHPFTSPSCTPEELEAN-PGQALSRAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H   +    F  +GI  E  E +FG L +A + G PPHGG+A G+
Sbjct: 476 MVLNGTELGGGSIRIHDQAMQRAVFRVLGIEAEEAEEKFGFLLQALKFGAPPHGGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+VML+ GA+++R+V  FP +Q+   ++  +P TV  + LREL +R+ E   +  +
Sbjct: 536 DRLVMLMTGAQSIRDVIAFPKTQSAACVMTDAPGTVDAKALRELNIRLREQKAQSAE 592


>gi|297584744|ref|YP_003700524.1| aspartyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297143201|gb|ADH99958.1| aspartyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 594

 Score =  617 bits (1590), Expect = e-174,   Method: Composition-based stats.
 Identities = 230/596 (38%), Positives = 346/596 (58%), Gaps = 8/596 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
           + RTH CG+L     G  V L GWV R R  G +IF+D+RD  G  Q+V N D      E
Sbjct: 2   KQRTHVCGELNEKHTGEQVTLQGWVKRRRDLGELIFVDLRDRSGYVQIVFNGDENRETHE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSE+V+ + G++  R  E +N  I TG+IE++   + IL+ A+ LP  +  E+E 
Sbjct: 62  MAEKIRSEYVIEVTGVITKRDQENVNDKIPTGEIEVNVTDMTILNKAKGLPFMIEDEQEI 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR  +   +  R R    +R  +  E F+E  TPILT S+PEGARD+
Sbjct: 122 NEDTRLKYRYLDLRRTRMADTMQMRYRTTKLIRDILDEEQFMEIETPILTKSTPEGARDY 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++G FYALPQ+PQ +KQLLM SGF+RY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 182 LVPSRVHEGEFYALPQSPQLFKQLLMVSGFERYYQIARCFRDEDLRADRQP-EFTQVDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ ++++L+ ME+++  + +E    + V   FLR+ Y +A+ R+G+DKPDLR  + + 
Sbjct: 241 ASFMGKENLLSMMESMMVRLVKELKGVD-VETPFLRLTYHEAMERFGSDKPDLRFGMELK 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E    S F+VF+  +      +   +   G   +R   D ++ +A   G  GLA++ 
Sbjct: 300 DVSEIVKDSSFKVFASTVERGDAVKGICVKGIGPDYSRKDLDALSSFAEIYGAKGLAWL- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E+G +   GP+AK  +    ++I  R +   GD   F+A           + RN  
Sbjct: 359 -KVEENGALK--GPIAKFFDEAKAQSIIERFEADAGDVLLFVADKRKVAYDVLGNLRNKF 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL + +   F F W+ +FP   ++E+ K+    H+PFT P      L       ++A 
Sbjct: 416 AKELNLFDPEDFNFLWVTEFPLLSYDEDHKRYVAEHHPFTRPVEEDVELLTTAPEQVRAE 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G  R +  ++  + F+ +G S E  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDLVLNGYELGGGSQRIYERDLQEKMFTALGFSDEEAKAQFGFLLDAFEYGTPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VM+L    N+R+   FP + +   LL  +P  VS  QL EL L+     K
Sbjct: 536 LGLDRLVMILAERTNLRDTIAFPKTASANCLLTNAPGGVSDAQLDELHLKSTAEKK 591


>gi|86146480|ref|ZP_01064803.1| aspartyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85835743|gb|EAQ53878.1| aspartyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 592

 Score =  617 bits (1590), Expect = e-174,   Method: Composition-based stats.
 Identities = 219/594 (36%), Positives = 322/594 (54%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG+L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD    F IA 
Sbjct: 2   RTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMKDIFPIAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ +   G V  R    +N ++ TG++EL A  +EI++ +E   LP+   +   E 
Sbjct: 62  QLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELYATGLEIINRSE--ALPLDFNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR++DLRR  +   I  R R  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVRRFLDENLFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++ N  E ++  +++E  +       F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTSQEVRNVTEKLVHDMWKELLDVE--LGQFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   E     G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVIRVPGGAKLTRKQIDGYAEHVNIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L+      I  R   + GD   F A             R  +  +
Sbjct: 357 RAAGMEGIQSPVAKFLSEDVINGILDRTQAESGDIILFGADKAGIVAEAMGALRIKLGDD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + +   +   W++DFP +E +  E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LELTDKKAWAPLWVVDFPMFEED-GEGNLHAMHHPFTSPLGVNAEELKANPAAANSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHSAEMQTAVFGILGIEAKEQQEKFGFLLEALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+ MLL G +N+R+V  FP +     LL  +PS  +   L EL + +    KK
Sbjct: 536 DRLAMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAVKLAEKK 589


>gi|291287345|ref|YP_003504161.1| aspartyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884505|gb|ADD68205.1| aspartyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 596

 Score =  617 bits (1590), Expect = e-174,   Method: Composition-based stats.
 Identities = 229/588 (38%), Positives = 341/588 (57%), Gaps = 10/588 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H+C  L   ++G  V L GWV R R HGG+IF+D+RD  G+TQVV +P+       +A
Sbjct: 10  RSHNCVQLTAKNIGEEVCLMGWVQRRRDHGGVIFVDLRDREGLTQVVMSPEYNKDVHAVA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+R+E+V+ + G V  R   TIN  + TG+IE+   +++IL+ ++  P  +       E
Sbjct: 70  DSIRNEFVIAVKGKVGMRPEGTINTKLPTGEIEVMVDELKILNASQTPPFMIDDFTNANE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  +  N++ R  I+ +MR  + A +F++  TP LT S+PEGARD+LV
Sbjct: 130 DIRLKYRYLDLRRRKIQNNLITRHNIVRTMREYLYARDFLDIETPFLTKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G  YALPQ+PQ +KQLLM  G+D+YFQI  CFRDED R+DR P EF QLDMEMS
Sbjct: 190 PSRVNPGKCYALPQSPQMFKQLLMVGGYDKYFQIVKCFRDEDLRADRQP-EFTQLDMEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++D++  +E +   +F+       +   F R+ YD+A+ +YG D PD R  + +  +
Sbjct: 249 FIDREDLMELLEGMFIEIFQNIKGIK-LERGFPRMSYDNAMEKYGHDAPDTRFDMFLKTI 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            E      F+VF ++++     +       G   +R   D + E A S G  GLAYI   
Sbjct: 308 NELVADCGFKVFREVVADGGVVKAINAKGAGEKYSRKNIDELTELAVSLGAGGLAYIKVN 367

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D     +   P+ K L   + + I   +D + GD  FF AG       + +  R  + +
Sbjct: 368 ED-----SLQSPIVKFLGD-SADTIVKAMDGKPGDIIFFGAGKKDIVNLYMSKVRLKLGK 421

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I    + F W++DFP  +++ EEK+    H+PFT P      L   D   ++A  Y
Sbjct: 422 ELGLIKEGDYSFVWVLDFPLLDYDAEEKRYVAMHHPFTAPLDEDIPLFDTDPGQMRAKAY 481

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG EI  G IR H S+V  + F+ +G + E  E +FG    A + G PPHGGIA G
Sbjct: 482 DLVLNGSEIGGGSIRIHRSDVQEKMFNALGFTPEEREYKFGFFIDALKYGTPPHGGIAFG 541

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           +DRI  +L G+ ++R+V  FP +Q   D++  +PS +  +QL+EL ++
Sbjct: 542 VDRIATILTGSDSIRDVIAFPKTQKATDMMSEAPSKIDEKQLKELYMK 589


>gi|254296187|ref|ZP_04963644.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157805741|gb|EDO82911.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 406e]
          Length = 590

 Score =  617 bits (1590), Expect = e-174,   Method: Composition-based stats.
 Identities = 227/589 (38%), Positives = 324/589 (55%), Gaps = 8/589 (1%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVL 71
               +G  V L GWVHR R HGG+IF+D+RD  G+ QVV +PD    F  A+ VR+E+ +
Sbjct: 2   TEHLLGQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAEMFAAAEGVRNEFCI 61

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + GLV  R   TINA + +G+IE+   ++ +L+ +   P  +  +    E+ R  +R L
Sbjct: 62  QVKGLVRGRPEGTINAGLKSGRIEVLCHELNVLNASVTPPFQLDDDNLS-ETTRLTHRVL 120

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           DLRR  +  N+  R R+    R  +  + FI+  TP+LT S+PEGARD+LVPSRVN G F
Sbjct: 121 DLRRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNAGQF 180

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           +ALPQ+PQ +KQLLM + FDRY+QI  CFRDED R+DR P EF Q+D E SF+ + +I +
Sbjct: 181 FALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQP-EFTQIDCETSFLGEQEIRD 239

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E+++R +F+        +  F  + Y +A+ R+G+DKPDLR  +    +T+     +F
Sbjct: 240 LFEDMIRHIFKTTIGVELDAT-FPVMPYSEAMARFGSDKPDLRVKLEFTELTDAMKDVDF 298

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
           +VFS   +   G        KGG   R   D   E+ R  G  GLA+I       G    
Sbjct: 299 KVFSTPANTKDGRVAALRVPKGGELTRGDIDGYTEFVRIYGAKGLAWIKVNERAKGRDGL 358

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ-ELGIIN-- 428
             P+ K+L+  +  AI  R   QDGD  FF A             R  I   E G  N  
Sbjct: 359 QSPIVKNLHDASIAAILERTGAQDGDIIFFAADRAKVVNDSLGALRLKIGHSEFGKANGL 418

Query: 429 -CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
               ++  W++DFP +E+++EE +   AH+PFT P+         D     A  YD+V N
Sbjct: 419 VEAGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAYDMVLN 478

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G+EI  G +R H  EV  + F  + I  E  + +FG L  A Q G PPHGGIA G+DRIV
Sbjct: 479 GWEIGGGSVRIHREEVQSKVFRALKIGPEEAQAKFGFLLDALQYGAPPHGGIAFGLDRIV 538

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            ++ GA ++R+V  FP +Q    LL  +PS V   QLREL +R+ +  +
Sbjct: 539 TMMAGADSIRDVIAFPKTQRAQCLLTQAPSPVDERQLRELHIRLRQPEQ 587


>gi|121608304|ref|YP_996111.1| aspartyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|166225441|sp|A1WHI6|SYD_VEREI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|121552944|gb|ABM57093.1| aspartyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 604

 Score =  617 bits (1590), Expect = e-174,   Method: Composition-based stats.
 Identities = 227/599 (37%), Positives = 331/599 (55%), Gaps = 13/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG +  + +G  V L+GWV+R R HGG+IF+D+RD  G  QVV +P+    F+ A+
Sbjct: 4   RTHYCGLVTQALMGQTVTLAGWVNRRRDHGGVIFIDLRDREGHVQVVCDPEREQMFKTAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + GLV +R   + N  I +GQIE+    + +L+ +         E    E+
Sbjct: 64  GLRSEFCVQVTGLVRARPDGSSNDRIKSGQIEVLCHALNVLNPSVTPAFQ-IDEENLSET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + +N++ R ++   +R  + A  FI+  TP+LT S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPYMQRNLMLRYKVAMQVRNFLDANGFIDIETPMLTKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++ DI +  ++++  VF      +     F  + Y DA  RYG+DKPDLR  +    +T
Sbjct: 242 MQEQDIRDLFQDMIETVFRNTLGVDLGE--FPVMTYQDATSRYGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKG----GGGNRAFCDRMNEWARSQGQPGLAYI 359
                 +F+VFS    +  G  V      G    GG +R   D   E+ +  G  GLAYI
Sbjct: 300 GVMKDVDFKVFSGAAGMKGGRVVGLRVPGGARDAGGLSRGEIDAYTEFVKIYGAKGLAYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G      P+ K+L+      I  R   QDGD  FF A             R  
Sbjct: 360 KVNARARGRDGLQSPIVKNLHDAALTEILARTGAQDGDLIFFGADKEKIVNDAIGALRTK 419

Query: 420 IAQ-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           I   E G  N      +   W++DFP +E++E+ ++    H+PFT P+ G E    +   
Sbjct: 420 IGHSEFGKKNGLFEERWAALWVVDFPMFEFDEQAQRYSAMHHPFTAPKDGHEDWMASAPE 479

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              +  YD+V NG+E+  G +R H ++V  + F  + I+ E    +FG L  A Q G PP
Sbjct: 480 KCISKGYDMVLNGWEMGGGSVRIHRADVQQKVFDALQITPEEARLKFGFLLDALQYGAPP 539

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           HGG+A G+DRIV L+ GA+++R+V  FP +Q    LL  +PS V  +QLREL +R+   
Sbjct: 540 HGGMAFGLDRIVTLMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRLRNP 598


>gi|257059692|ref|YP_003137580.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256589858|gb|ACV00745.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 626

 Score =  617 bits (1590), Expect = e-174,   Method: Composition-based stats.
 Identities = 235/601 (39%), Positives = 347/601 (57%), Gaps = 17/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CGDL  +D+   V L GWV R R HGG+IF+D+RD  GI Q+V++P      +  A
Sbjct: 30  RTHYCGDLRATDIEQTVTLFGWVDRRRDHGGVIFIDLRDRTGIVQIVSDPQRTPDSYPDA 89

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
           +++R+E+V+ I G V  R  E++N  I TG++E+ A  IE+L+         +       
Sbjct: 90  ETLRNEYVVKIVGRVSQRPPESLNPKIPTGEVEIYANSIELLNGVNKQLPFVISSLEAEL 149

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRRD + KN+  R  ++ +MR  +   + F+E  TPILT S+PEGAR
Sbjct: 150 VREDVRLKYRYLDLRRDRMAKNLQLRHAVVKAMRRYLEDEQQFMEIETPILTRSTPEGAR 209

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR N G +YALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 210 DYLVPSRANPGQWYALPQSPQLFKQLLMVAGCDRYYQIARCFRDEDLRADRQP-EFTQLD 268

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +++IL+  E ++  +F+   N +     F R+ Y  A+ +YG D+PD R  + 
Sbjct: 269 MEMSFMSEEEILSLNEGLVCHIFKSVKNLDI-PRPFPRLTYAKAMEKYGNDRPDTRFGLE 327

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V++    S F+VFS+ +      ++  +P      +         +   A   G  G
Sbjct: 328 LVDVSDIVKDSGFKVFSEAVKTGGKVKILPVPGGNETISNVRIKPGGDLFREATEAGAKG 387

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AYI  R+ E   +  +G +  +L       +  R   + GD   F AGD        + 
Sbjct: 388 IAYI--RVKEDNKLDTIGAIKDNLTEDQKLELLARTGAKSGDLLLFGAGDTDTVNKSLSR 445

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  I ++LG+I+       WI +FP +EWN +EK+++  H+PFT P          DL 
Sbjct: 446 LRLVIGEQLGLIDPEKINLLWITEFPMFEWNADEKRLEALHHPFTAPNPEDLD----DLK 501

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NG E+  G +R +  +V  + F+ +G+S E   N+FG L  AF+ G PP
Sbjct: 502 TARAQAYDLVYNGVEVGGGSLRIYQKDVQEKVFATIGLSMEEAYNKFGFLLEAFEYGTPP 561

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL G  ++R+V  FP +Q    LL  +P+TV  +QL+EL ++    P
Sbjct: 562 HGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQASCLLTEAPATVDEKQLKELQVKSTYKP 621

Query: 596 K 596
           K
Sbjct: 622 K 622


>gi|325068855|ref|ZP_08127528.1| aspartyl-tRNA synthetase [Actinomyces oris K20]
          Length = 599

 Score =  617 bits (1590), Expect = e-174,   Method: Composition-based stats.
 Identities = 243/616 (39%), Positives = 341/616 (55%), Gaps = 34/616 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT + G L  SD+G  V L+GWV R R HGG+ F+D+RD  GI QVV        EIA  
Sbjct: 3   RTRTAGSLRASDIGQVVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVIR-----EEIAHD 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----Y 120
           +R+E+VL + G V +R     N N+ TG+IE+    +EIL+ +  LP  V    E     
Sbjct: 58  LRAEYVLAVTGEVSARPEGNANPNLPTGEIEVVVSDVEILNASAPLPFQVSDHAEDAGQV 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR+LDLRR  +   I  R ++  + R  + + +F+E  TP LT S+PEGARDF
Sbjct: 118 GEEARLRYRYLDLRRSAMQHAIRLRAKVSQAARRVLDSHDFVEIETPTLTRSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 178 LVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD++   E+VLR V+        +     R+ Y DA+ +YG+DKPDLR    + 
Sbjct: 237 MSFVEQDDVIAVAEDVLREVWALIG--YELPTPIARMTYHDAMEKYGSDKPDLRFGCELV 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T++F  + FRVF         Y    +   G   +R   D   EWA+ +G  GLAY+ 
Sbjct: 295 DLTDYFKDTTFRVFQNP------YVGAVVMPGGASQSRRTFDAWQEWAKQRGAKGLAYVT 348

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +   GPVAK++     E +        GD  FF AG      +    AR  I
Sbjct: 349 --VAEDGTLG--GPVAKNITDAEREGLAQAAGAAPGDCIFFAAGPVDSSRALLGAARLEI 404

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGMESLK 470
            +  G+I+ N + F W++D P ++ + E K               H+ FT P+       
Sbjct: 405 GKRCGLIDDNEWSFVWVVDAPLFKPSAEAKADGDVALGKSAWTAVHHAFTSPKPECLETF 464

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  S  A+ YD+VCNG EI  G IR H S+V  + F+ +GI ++  + +FG L  AF+
Sbjct: 465 DTDPASALAYAYDIVCNGNEIGGGSIRIHRSDVQERVFNVMGIGEQEAQEKFGFLLDAFK 524

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DRIV LL  A ++R+V  FP S    D L  +P+ ++ EQ +E G  
Sbjct: 525 FGAPPHGGIAFGWDRIVSLLTKADSIRDVIAFPKSGGGFDPLTEAPAPITPEQRKEAG-- 582

Query: 591 IVENPKKILKISVTTI 606
           +   P+K  K   +  
Sbjct: 583 VDAEPEKADKPEGSNK 598


>gi|148977432|ref|ZP_01814032.1| aspartyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145963384|gb|EDK28649.1| aspartyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 593

 Score =  617 bits (1590), Expect = e-174,   Method: Composition-based stats.
 Identities = 220/594 (37%), Positives = 326/594 (54%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG+L  S  G  V L GWV+R R  GG+IF+D+RD  GI QVV +PD    F IA 
Sbjct: 2   RTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDIFPIAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ +   G V  R    +N ++ TG++EL A  +EI++ +E   LP+   +   E 
Sbjct: 62  QLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELYATGLEIINRSE--ALPLDFNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR++DLRR  +   I  R R  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVRRFLDENLFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++ N  E ++  +++E  +       F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSSQEVRNITEKLVHDMWKELLDVE--LGQFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   E+    G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVIRVPGGAKLTRKQIDGYAEYVNIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L+      I  R + + GD   F A             R  +  +
Sbjct: 357 RAAGMEGIQSPVAKFLSEDVINGILDRTEAESGDIILFGADKAGIVAEAMGALRLKLGTD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E +  E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LELTDTSAWAPLWVVDFPMFEED-GEGNLHAMHHPFTSPLGVTAEELKANPAAANSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI ++  + +FG L  A Q G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNAEMQTAVFGILGIEEKEQQEKFGFLLDALQYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+ MLL G +N+R+V  FP +     LL  +PS  +   L EL + +    K+
Sbjct: 536 DRLAMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAVKVAQKE 589


>gi|257899579|ref|ZP_05679232.1| aspartyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837491|gb|EEV62565.1| aspartyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 589

 Score =  617 bits (1590), Expect = e-174,   Method: Composition-based stats.
 Identities = 229/590 (38%), Positives = 331/590 (56%), Gaps = 10/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+     +EIA
Sbjct: 4   RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G+V  R    +N  + TG+ E+ A +I IL+ A+  P  +  ++   +
Sbjct: 64  DKCRSEYVIEVTGVVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KNI  R     ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E      V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEVRGIE-VALPFPRMTYDEAMARYGSDKPDTRFEMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E     EF+VF   L      +           +R   D++ ++    G  GLA++   
Sbjct: 302 SETVKEVEFKVFQMALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK +    TEAI    D + GD   F A       +     R  + +
Sbjct: 362 ED-----GLKGPIAKFMG-EATEAIIKATDAEPGDLLMFGADKSEIVAAALGAIRTRLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP+     L   D   + A  Y
Sbjct: 416 ELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKAEDIPLLAEDPAKVYAEAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  E+  +    +G +KE +E +FG L  A   G PPHGGIA G
Sbjct: 476 DIVLNGYELGGGSIRIHTRELQEKVLKTLGFTKEQMEEQFGFLLTALDYGFPPHGGIALG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR  MLL G  N+REV  FP +    D++  +PS VS  QL EL + + 
Sbjct: 536 LDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585


>gi|56963342|ref|YP_175073.1| aspartyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|62287530|sp|Q5WHP3|SYD_BACSK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56909585|dbj|BAD64112.1| aspartyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 589

 Score =  617 bits (1590), Expect = e-174,   Method: Composition-based stats.
 Identities = 234/594 (39%), Positives = 346/594 (58%), Gaps = 9/594 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             RTH CG L  +  G  V+L GWV R R  G +IFLD+RD  GI QVV +P+      +
Sbjct: 1   MKRTHHCGQLDKTLAGQQVQLKGWVQRRRDLGQVIFLDLRDRSGIVQVVCSPEVSEEALK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  VR+E+++ + G+V+ R+ + +N  + TG IE+  +++EIL+V++ LP  +  + + 
Sbjct: 61  AADRVRNEYLVAVSGIVVERNEQAVNDKLATGAIEVHVRELEILNVSKSLPFQIEADTDA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + +    R +I+ S+R  + A+ ++E  TP+LT S+PEGARD+
Sbjct: 121 AEDVRLKYRYLDLRRPDMQEAFAMRHKIMKSVRDFLDADGYLEIETPMLTKSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGF++YFQI  CFRDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRVHHGQFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQP-EFTQIDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF++ +DIL   E ++  + +E      +   F R+ Y++A+ RYG+DKPD R  + + 
Sbjct: 240 TSFLDTEDILAMTEAMMEKLLKETHGLE-LKRPFSRMTYEEAMNRYGSDKPDTRFGMELI 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +++    +EF+VF   L      +   +       +R   D + ++ +  G  GLA++ 
Sbjct: 299 ELSDVLKDTEFKVFKGALEAGGIIKGLTLKGGADKLSRKDIDALADFVKPYGAKGLAWL- 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++D+ G     GP+AK  N   T A+   +D + GD  FF A             R   
Sbjct: 358 -KVDDEG---IKGPIAKFFNEAQTAALLAAMDAEAGDLLFFGADKKQVVFHALGALRLKF 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +E  +I+ N F F W+ DFP  E++E+ K+    H+PFT P+     L       ++A 
Sbjct: 414 GKEFQLIDENAFHFLWVTDFPLVEYDEQAKRFVALHHPFTRPKAEDLDLMETHPEQVRAE 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NGFE+  G  R +  E+  + F  +G S E  +  FG L  AF  G PPHGGIA
Sbjct: 474 AYDLVLNGFELGGGSQRIYERELQEKMFKLLGFSSEAAKEEFGFLLEAFDYGTPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVMLL    N+REV  FP + +  DLL  +P+ VSVEQL +L L I+  
Sbjct: 534 LGLDRIVMLLARKSNLREVIAFPKTASASDLLTEAPNKVSVEQLIDLNLSIISK 587


>gi|258424055|ref|ZP_05686937.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845676|gb|EEV69708.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 588

 Score =  616 bits (1589), Expect = e-174,   Method: Composition-based stats.
 Identities = 231/592 (39%), Positives = 334/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +I
Sbjct: 3   KRTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E             
Sbjct: 63  AETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDEEGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +L+ V +E  +       F R+ Y +A+RRYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVMQMGEEMLKKVVKEVKDVEINDA-FPRMTYKEAMRRYGSDKPDTRFEMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++     +F+VF   +  +   +            R   D + E+    G  GLA++ 
Sbjct: 301 DVSQLGRDMDFKVFKDTVENDGEIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+ +     N E +      + GD   F+A  P          R  +
Sbjct: 361 VVED-----GLTGPIGRFFETENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A 
Sbjct: 416 AKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRIR 587


>gi|257425754|ref|ZP_05602178.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428414|ref|ZP_05604812.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431052|ref|ZP_05607431.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433738|ref|ZP_05610096.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436653|ref|ZP_05612697.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282914435|ref|ZP_06322221.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282924728|ref|ZP_06332396.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|293503508|ref|ZP_06667355.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510526|ref|ZP_06669232.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293531067|ref|ZP_06671749.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|257271448|gb|EEV03594.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275255|gb|EEV06742.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278255|gb|EEV08897.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281831|gb|EEV11968.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284004|gb|EEV14127.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282313563|gb|EFB43958.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282321616|gb|EFB51941.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|290920335|gb|EFD97401.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095174|gb|EFE25439.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466890|gb|EFF09410.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
          Length = 588

 Score =  616 bits (1589), Expect = e-174,   Method: Composition-based stats.
 Identities = 230/592 (38%), Positives = 334/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +I
Sbjct: 3   KRTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E             
Sbjct: 63  AETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRHELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +L+    +   G  ++  F R+ Y +A+RRYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVMQMGEEMLKK-VVKEVKGVEINGAFPRMTYKEAMRRYGSDKPDTRFEMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++     +F+VF   +  +   +            R   D + E+    G  GLA++ 
Sbjct: 301 DVSQLGRDMDFKVFKDTVENDGEIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+ +     N E +      + GD   F+A  P          R  +
Sbjct: 361 VVED-----GLTGPIGRFFEAENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A 
Sbjct: 416 AKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRIR 587


>gi|153872335|ref|ZP_02001260.1| Aspartyl-tRNA synthetase [Beggiatoa sp. PS]
 gi|152071197|gb|EDN68738.1| Aspartyl-tRNA synthetase [Beggiatoa sp. PS]
          Length = 595

 Score =  616 bits (1589), Expect = e-174,   Method: Composition-based stats.
 Identities = 239/593 (40%), Positives = 341/593 (57%), Gaps = 5/593 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S +   V L GWVHR R HGG+IF+D+RD  G+ Q+V NP+ +  F  A+
Sbjct: 2   RSHYCGQLNESFIDKSVILCGWVHRRRDHGGVIFIDLRDREGLVQIVFNPEIAEAFATAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL I+G V  R  +T N ++ TGQ+E+  ++++IL+ AE  P     E    E 
Sbjct: 62  KVRSEYVLRIEGRVRHRPEDTENQDLATGQVEVVVEQVDILNAAETPPFQ-LDESHINED 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR +YR++DLRR  +      R +I   MR  + +E F+E  TP+LT ++PEGARD+LVP
Sbjct: 121 IRLRYRYIDLRRPEMQARFQLRAQITRLMRQFLDSEGFLEIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 181 SRTHPGQFFALPQSPQLFKQLLMMSGMDRYYQIVRCFRDEDLRADRQP-EFTQLDIEMSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++  + N ME+++R +FE+  N   +   F  + Y +AIRR+GTDKPDLR P+ + ++ 
Sbjct: 240 IDESMLKNVMESMIRLLFEKVLNVE-LPEPFPSLSYAEAIRRFGTDKPDLRVPLELTDID 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF+VF+   +   G         G G +R   D    +    G  GLAYI    
Sbjct: 299 DLMANVEFKVFAGPANDPNGRVAALCVPNGKGLSRKQIDDYTGFVGIYGAKGLAYIKVND 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K L     EA+  R     G   FF A             R  IA++
Sbjct: 359 ITAGRNGLQSPILKFLPDKAIEALLERTKAATGSIIFFGADKAKVVNEALGALRLKIAED 418

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++    ++  W++D+P +EW+E+EK+    H+PFT P                +  YD
Sbjct: 419 LKLVQKG-WKPLWVIDYPMFEWDEKEKRWMSLHHPFTAPNIQDIEKLEAHPNQSLSRAYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR H  E+    F  +GI +E  + +FG L  A + G PPHGGIA G+
Sbjct: 478 MVLNGEEIGGGSIRIHRPEMQSAVFRILGIEEEEAQEKFGFLLEALKYGCPPHGGIAFGL 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR++ML+ GA ++REV  FP +Q    LL  +PS  S EQLR+L +R+  N +
Sbjct: 538 DRLIMLMSGANSIREVIAFPKTQTASCLLTSAPSAASPEQLRDLHIRLRANKQ 590


>gi|322515237|ref|ZP_08068235.1| aspartate--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322118742|gb|EFX90948.1| aspartate--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 591

 Score =  616 bits (1589), Expect = e-174,   Method: Composition-based stats.
 Identities = 218/593 (36%), Positives = 336/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S VG  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+IA 
Sbjct: 3   RSHYCGALNRSHVGQTVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKIAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE  + I G V++R    IN ++ TG+IE+  + + + + +E   LP+   +   E 
Sbjct: 63  SLRSEACVQIQGEVIARDESQINKDMATGEIEVLVKNVIVYNNSE--VLPLDFNQSNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHNGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   MEN++ G++ +  N +     F  + + + ++R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAEEVRELMENMIHGLWLDRLNVD--LGKFPMMTWQEVMQRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DILKDVEFKVFNEPANSADGRVTVLRVPNGATLTRKQIDEYTQFVGIYGAKGLAWAKIND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +       PVAK LN    +A+  R +   GD  FF A             R  + ++
Sbjct: 358 VNASMEGIQSPVAKFLNEDIFKALIERTNATSGDILFFGADKWQVVTDSMGALRLKVGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + ++  W++DFP +E + +E  +   H+PFT P+         + ++  A  YD
Sbjct: 418 LALTDLSAWKPLWVIDFPMFEKD-DEGNLSAMHHPFTSPKDLTPEELAANPVNAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R +  ++    FS +GI++E  + +F  L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIYDPKMQQTVFSILGINEEEQQEKFSFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L ELG+ +V+  K
Sbjct: 537 DRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSFANPQALEELGIAVVKKEK 589


>gi|307243797|ref|ZP_07525928.1| aspartate--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492800|gb|EFM64822.1| aspartate--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 596

 Score =  616 bits (1589), Expect = e-174,   Method: Composition-based stats.
 Identities = 226/599 (37%), Positives = 342/599 (57%), Gaps = 13/599 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             RT   GDL  SD+G  V L GWV + R  GG++F+D+RD  GI+Q+V + +     FE
Sbjct: 7   MKRTCYAGDLRSSDIGKEVVLMGWVQKKRNLGGLVFVDLRDRGGISQIVFDTEVSKEAFE 66

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ + SE+V+ + G V+ R ++  N NI TG+IE+ A+++ +L+ ++  P+ +  + E 
Sbjct: 67  KAEKLGSEYVIGVRGKVLERQSK--NPNIPTGEIEVFAEELRVLNESQTPPIYIKDDDEV 124

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E++R KYR+LDLR+  + KN++ R ++ N +R  +   +F E  TP L   +PEGARD+
Sbjct: 125 SEALRLKYRYLDLRKPKMQKNLMLRHKVANVVRNYLSDNDFCEIETPFLVKPTPEGARDY 184

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRVN+G FYALPQ+PQ YKQLLM SG DRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 185 LVPSRVNEGKFYALPQSPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 243

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVE++D++  ME +++ +F++  + + V   F R+ Y DA+ +YG+DKPD R  +   
Sbjct: 244 MSFVEENDVMTIMEGLVKDIFKKVLDRDIV-TPFPRMTYADAMDKYGSDKPDTRYGLEFV 302

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           N++       F+VFS             +        R     + + A++    GLA++ 
Sbjct: 303 NISNIVADCGFKVFSDSTKPGSSVRGINVVGGADHFTRKAISHLEDHAKTYRAKGLAWMK 362

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                  +     P+AK         I   +D + GD   F+A             R  +
Sbjct: 363 IT-----DEGVTSPIAKFFTEEELAKITGAMDAKSGDLLLFVADKDPVVYDALGQVRIAV 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478
           A +LG+ + N F   W+ +FP +E +EE  +    H+PFT P         +  + L ++
Sbjct: 418 ADKLGLADPNQFNLLWVTEFPIFEEDEENGRFVAKHHPFTSPMDEDLDKLESAENKLELR 477

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G IR   +E+  + F  +G + E   N+FG L  AF+ G PPHGG
Sbjct: 478 AKAYDIVLNGYEVGGGSIRISNAEIQKKMFKALGFTDEEAYNKFGFLIDAFKFGTPPHGG 537

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           IA G+DR+VMLL GA+N+REV  FP +QN    +  +PS    +QL+EL +R+    K+
Sbjct: 538 IAFGLDRLVMLLAGAENIREVIAFPKNQNAVCPMTNAPSIAEDDQLKELSIRVEIEDKE 596


>gi|257888148|ref|ZP_05667801.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257824202|gb|EEV51134.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,141,733]
          Length = 589

 Score =  616 bits (1589), Expect = e-174,   Method: Composition-based stats.
 Identities = 230/590 (38%), Positives = 331/590 (56%), Gaps = 10/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+     +EIA
Sbjct: 4   RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEINKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G+V  R    +N  + TG+ E+ A +I IL+ A+  P  +  ++   +
Sbjct: 64  DKCRSEYVIEVTGVVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KNI  R     ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E      V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEVRGIE-VTLPFPRMTYDEAMARYGSDKPDTRFEMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E     EF+VF   L      +           +R   D++ ++    G  GLA++   
Sbjct: 302 SETVKEVEFKVFQMALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK +    TEAI    D + GD   F A       +     R  + +
Sbjct: 362 ED-----GLKGPIAKFMG-EATEAIIKATDAEPGDLLMFGADKSEIVAAALGAIRTRLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP+     L   D   + A  Y
Sbjct: 416 ELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKAEYIPLLAEDPAKVYAEAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  E+  +    +G +KE +E +FG L  A   G PPHGGIA G
Sbjct: 476 DIVLNGYELGGGSIRIHTRELQEKVLKTLGFTKEQMEEQFGFLLTALDYGFPPHGGIALG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR  MLL G  N+REV  FP +    D++  +PS VS  QL EL + + 
Sbjct: 536 LDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585


>gi|225568634|ref|ZP_03777659.1| hypothetical protein CLOHYLEM_04712 [Clostridium hylemonae DSM
           15053]
 gi|225162562|gb|EEG75181.1| hypothetical protein CLOHYLEM_04712 [Clostridium hylemonae DSM
           15053]
          Length = 595

 Score =  616 bits (1589), Expect = e-174,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 342/595 (57%), Gaps = 11/595 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFE 60
            RTH CG+L  ++ G  V + GWV + R  GG++F+D+RD  GI Q+V      DS   E
Sbjct: 9   KRTHRCGELSGANAGQTVTVMGWVQKNRNKGGLVFIDVRDRSGIIQIVFEEGSTDSGLIE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +R+E+V+ + G V  RS   +N N+ TG IE+   ++ ILS +E  P P+    + 
Sbjct: 69  KAAKLRAEFVVAVTGEVKKRSG-AVNENLSTGDIEIIPSQLRILSESETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  L KN++ R+++    R  +  E F+E  TPIL  S+PEGARD+
Sbjct: 128 KEEVRLKYRYLDLRRPDLQKNMIMRSQVATLTRQFLAEEGFLEIETPILIGSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QG FYALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRIHQGHFYALPQSPQLFKQLLMCSGYDRYFQIAKCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E +L  +F++      V     R+ + +A+ RYG+DKPD R  + + 
Sbjct: 247 LSFVDVDDVIDVNERLLAKLFKDVLGVE-VVLPIPRMTWQEAMDRYGSDKPDTRFGMELT 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT+     EF VF   +             +GG   R   D++ ++AR  G  GLAYI 
Sbjct: 306 DVTDVVKDCEFAVFKGAIENGGTVRGINAKGQGG-MPRKKIDKLVDFARDFGAKGLAYIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D     +     AK +       +   +  ++GD   F A           + R  +
Sbjct: 365 VQEDG----SVKSSFAKFMKEEEMSGLIEAMGGENGDLLLFAADKNKVVWDVLGNLRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++ +++ + ++F W+ +FP  EWNEE+++    H+PFTMP          D   ++A 
Sbjct: 421 ARQMELLDKSEYKFLWVTEFPLLEWNEEQERYTAMHHPFTMPMEEDLEYIDTDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R +  +V  + F  +G + E  + +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIYHQDVQNKMFEVLGFTPEKAQEQFGFLLNAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+DR+VML+    ++R+V  FP  ++  DL+  +P+ V  +QL ELGL +    
Sbjct: 541 YGLDRMVMLMAKEDSIRDVIAFPKVKDASDLMTEAPTAVEEKQLEELGLSVTVQE 595


>gi|218709098|ref|YP_002416719.1| aspartyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254781762|sp|B7VMI0|SYD_VIBSL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218322117|emb|CAV18230.1| Aspartyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 592

 Score =  616 bits (1589), Expect = e-174,   Method: Composition-based stats.
 Identities = 219/594 (36%), Positives = 323/594 (54%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG+L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD    F IA 
Sbjct: 2   RTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMKDIFPIAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ +   G V  R    +N ++ TG++EL A  +EI++ +E   LP+   +   E 
Sbjct: 62  QLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELYATGLEIINRSE--ALPLDFNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR++DLRR  +   I  R R  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVRRFLDENLFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++ N  E ++  +++E  +       F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 LTSQEVRNVTEKLVHDMWKELLDVE--LGQFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   E     G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVIRVPGGAKLTRKQIDGYAEHVNIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L+      I  R   + GD   F A             R  +  +
Sbjct: 357 RAAGMEGIQSPVAKFLSEDVINGILDRTQAESGDIILFGADKAGIVAEAMGALRLKLGTD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + +   W++DFP +E +  E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LELTDTSAWAPLWVVDFPMFEED-GEGNLHAMHHPFTSPLGVNAEELKANPAAANSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHSAEMQTAVFGILGIEAKEQQEKFGFLLEALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+ MLL G +N+R+V  FP +     LL  +PS  +   L EL + +    KK
Sbjct: 536 DRLAMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAVKLAEKK 589


>gi|254368450|ref|ZP_04984467.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157121344|gb|EDO65545.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 592

 Score =  616 bits (1589), Expect = e-174,   Method: Composition-based stats.
 Identities = 224/595 (37%), Positives = 344/595 (57%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+        V + GWVHR R HGG+IFLDIRD  G+ Q+V NPD+  F++A S
Sbjct: 4   RTHYSSDINEKLQRQKVTVCGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPDNDNFKVADS 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+  +G+V  R     N NI +G++E+    IE+++ ++ +P  +   +   E +
Sbjct: 64  LRSEFVIKAEGVVNLRPEGQENKNISSGKVEIIGDSIEVINKSKTIPFQLDDFQSTGEDV 123

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 124 KLKYRYIDLRRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 183

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 184 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIEASFI 242

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+E       +  F  + + DAI +YG+DKPDLR P+   N+ E
Sbjct: 243 DEAFIMSTMERMIAGLFKETIGVEF-ATPFQVMTFADAIDKYGSDKPDLRIPLEFVNIKE 301

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG     R   D   ++    G  GLAYI   
Sbjct: 302 DMQNEEFKVFSGP-ANDPQSRVIALRIPGGNDKLTRKMIDEYTKFVGIYGAKGLAYIKIN 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   ++ D  FF AG            R  I +
Sbjct: 361 SLSQGKEGLQSPIVKNISEETLFKVIEKTSAKEDDLLFFGAGKTKIVNDSMGALRAKIGE 420

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQ 481
           +L + N + +   W++DFP +E ++   ++   H+PFT P+   +E L   +   + +  
Sbjct: 421 DLDLFNKD-WAPLWVVDFPMFEKDD--NRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G IR H  ++  + F+ +GIS +    +FG +  A   G P HGGIA 
Sbjct: 478 YDMVINGYEVGGGSIRIHKQDIQAKVFNLLGISDDEAREKFGFMLDALSYGTPIHGGIAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR++MLL G  N+R+V  FP +Q    L+  +PSTVS+EQL ELG+ + +  +
Sbjct: 538 GVDRLIMLLTGTTNIRDVIAFPKTQTASCLMTEAPSTVSLEQLNELGIAVKKEER 592


>gi|283470906|emb|CAQ50117.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 588

 Score =  616 bits (1589), Expect = e-174,   Method: Composition-based stats.
 Identities = 231/592 (39%), Positives = 333/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +I
Sbjct: 3   KRTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E             
Sbjct: 63  AETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +L+ V +E          F R+ Y +A+RRYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVMQMGEEMLKKVVKEVKGVEINDA-FPRMTYKEAMRRYGSDKPDTRFEMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++     +F+VF   +  +   +            R   D + E+    G  GLA++ 
Sbjct: 301 DVSQLGRDMDFKVFKDTVENDGEIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+ +     N E +      + GD   F+A  P          R  +
Sbjct: 361 VVED-----GLTGPIGRFFETENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A 
Sbjct: 416 AKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRIR 587


>gi|239995982|ref|ZP_04716506.1| aspartyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 586

 Score =  616 bits (1588), Expect = e-174,   Method: Composition-based stats.
 Identities = 209/591 (35%), Positives = 334/591 (56%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG++  S +G  V L GWV++ R  GG+IF+D+RD  GI QVV +PD      +A 
Sbjct: 2   RTDYCGNIDSSYIGQEVTLCGWVNKRRDLGGVIFIDLRDREGIVQVVFDPDLPDVLSVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE+ + + G V +R    +N ++ TG+IE+    +E+++ ++   LP+   +E  E 
Sbjct: 62  TLRSEFCVKLTGKVRARPEGQVNKDMRTGEIEILGTGLEVINKSD--VLPLDWNQENSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  + + +  R ++  ++R  +  E F++  TPILT ++PEGARD+LVP
Sbjct: 120 QRLRYRYLDLRRPVMSQRLQFRAKVTGAVRRFLEEEGFLDIETPILTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D+E +F
Sbjct: 180 SRTHKGEFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETTF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++ D +++  E ++R +F +  N +    +F R+ Y +A+ R+G+DKPDLRNP+ + +V 
Sbjct: 239 LDADGVMSITERMIRDLFNKMLNVD--LGDFPRMTYKEAMTRFGSDKPDLRNPLELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + +F+VFS   +   G         G   +R   D   ++    G  GLA+I    
Sbjct: 297 DLLANVDFKVFSGPANDPKGRVAAIRVPGGASLSRKQIDEYTKFVGIYGAKGLAWIKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K L    T A+  R   Q GD   F A             R  + ++
Sbjct: 357 AGAGLEGLQSPILKFLTEDITNAMLERTGAQSGDILLFGADSYTVVTEAMGALRLKLGED 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    ++  W++DFP +E  E + ++   H+PFT P+G        +     +  YD
Sbjct: 417 FELL-EGEWKPLWVVDFPMFE--EFDGQLHAIHHPFTAPRGLTPEELKANPAEALSDAYD 473

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  ++    F+ +GI  E  +N+FG L  A + G PPH G+A G+
Sbjct: 474 MVLNGVELGGGSVRIHNEDMQSTVFNILGIDDEEAKNKFGFLLDALRFGAPPHAGLAFGL 533

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR+VML+ GA ++R+V  FP +      L  +PS  + +QL EL +  V+ 
Sbjct: 534 DRLVMLMTGATSIRDVMAFPKTTTAACPLTSAPSPANPQQLEELAIATVKK 584


>gi|240949964|ref|ZP_04754280.1| aspartyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240295564|gb|EER46290.1| aspartyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 588

 Score =  616 bits (1588), Expect = e-174,   Method: Composition-based stats.
 Identities = 217/592 (36%), Positives = 332/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S VG  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F++A 
Sbjct: 3   RSHYCGALNRSHVGQAVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKVAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E  + I G V++R    IN  + TG+IE+  + + + + A+   LP+   +   E 
Sbjct: 63  ALRAEACVQIQGEVIARDESQINKEMATGEIEVLVKNVLVYNNAD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   ME ++ G++ +  N +     F  + + +A+ R+G+DKPDLRNP+ + +V 
Sbjct: 240 MTAEEVRAVMEEMIHGLWLDRLNVD--LGKFPMMTWQEAMDRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DILKDVEFKVFNEPANSPDGRVTVLKVPNGAALTRKQIDEYTQFVGIYGAKGLAWAKIND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN    +A+  R   Q+GD  FF A             R  + ++
Sbjct: 358 VNAGMEGIQSPVAKFLNEDVFKALIERTSAQNGDILFFGADKWQVVTDSMGALRLKVGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ +   ++  W++DFP +E + +E  +   H+PFT P+G        D +   A  YD
Sbjct: 418 LGLTDLTAWKPLWVVDFPMFERD-DEGNLSAMHHPFTSPKGLSPEELAADPVKAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F+ +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFNILGINEEEQAEKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L EL + +    
Sbjct: 537 DRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSYANPQALEELAISVTTKE 588


>gi|15604021|ref|NP_220536.1| aspartyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226169|sp|Q9ZE17|SYD_RICPR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3860712|emb|CAA14613.1| ASPARAGINYL-TRNA SYNTHETASE (aspS) [Rickettsia prowazekii]
 gi|292571740|gb|ADE29655.1| Aspartyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 605

 Score =  616 bits (1588), Expect = e-174,   Method: Composition-based stats.
 Identities = 307/606 (50%), Positives = 417/606 (68%), Gaps = 12/606 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           MH+YRTH+C +L +S+VG  V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 1   MHKYRTHNCNELQLSNVGQEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNQQLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A  +  E V+ + G V++RS +TIN  + TG +E+ A +  + S +  LP  +  E+E
Sbjct: 61  YDASRLCYESVITVSGTVVARSLDTINNKLPTGYVEVLAMECIVESASSPLPFVINNEKE 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R+++I  +R  MIA  F E  TPILT+SSPEGARD
Sbjct: 121 APEESRLKHRFLDLRREKLHNNIILRSQVIAHIRHLMIARGFTELQTPILTSSSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRIHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDL 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+DI NT+E VL  +F +F+N    +  F+RI Y++++ +YG+DKPDLRNPII+
Sbjct: 241 EMSFVTQEDIFNTIEPVLYDLFTKFTNKTVSNTPFVRIPYNESMLKYGSDKPDLRNPIII 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S F +F +  ++  G  V AIPA       R+F D+M E+A S+G  GL Y
Sbjct: 301 SDVTEVFRDSNFTIFRE--NIKKGSVVHAIPAPQAASLPRSFFDKMIEFAISKGARGLGY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +   ESG     GP++K L     E ++   +  +GD+ FF++    +        R 
Sbjct: 359 IQF--SESG--EAKGPLSKFLTGQQLEILKATANTSNGDAVFFVSDKKDEAVKLCGKVRI 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDL 474
            + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +L
Sbjct: 415 KLGEELNLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEEL 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L++ A+QYD+VCNG E++SG IRNH  E+M +AFS  G S E VE RFG + +AF+ G P
Sbjct: 475 LALTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSAEEVEQRFGAMIKAFRFGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  +
Sbjct: 535 PHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEEKALKELSIMLSPS 594

Query: 595 PKKILK 600
            +KI K
Sbjct: 595 SRKIHK 600


>gi|169350230|ref|ZP_02867168.1| hypothetical protein CLOSPI_00974 [Clostridium spiroforme DSM 1552]
 gi|169293013|gb|EDS75146.1| hypothetical protein CLOSPI_00974 [Clostridium spiroforme DSM 1552]
          Length = 583

 Score =  616 bits (1588), Expect = e-174,   Method: Composition-based stats.
 Identities = 221/592 (37%), Positives = 345/592 (58%), Gaps = 12/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L +SDV   V L GWV + R  G ++F+D+RD +GITQ+V N +     +AK 
Sbjct: 3   RTHNNGELRISDVNKIVELKGWVAKKRNLGSLVFIDLRDRHGITQIVLNEE--MEALAKD 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +++E+V+ + G V+ RS++  N N+ TG IE+ A +I+I++ A+  P+    + +  E  
Sbjct: 61  IKNEYVIHVVGKVIERSSK--NPNMPTGDIEIEASQIDIINTAKVTPIYTSDDTDASEDA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR  +   I+ R +I  S+R  +   +FI+  TP L  S+PEGARDFLVPS
Sbjct: 119 RMQYRYLDLRRPVMQNKIITRHKITRSIRDFLDNHDFIDIETPYLNRSTPEGARDFLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ GSFYALPQ+PQ +KQLLM SGF+RY+QIA CFRDED R DR P EF Q+D+EMSF+
Sbjct: 179 RVHNGSFYALPQSPQLFKQLLMVSGFERYYQIARCFRDEDLRLDRQP-EFTQVDVEMSFM 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             D+I+   E ++  V  +    + +     R+ + +A+ +YG DKPD+R  + + N+ E
Sbjct: 238 TTDEIITLGEQLIAKVMNDVKGID-LKLPLPRMTWHEAMEKYGIDKPDIRFGLELVNLNE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                +F VF   L  N   +   +  +    +R   D++ +  ++    GLA++  +  
Sbjct: 297 VVKDVDFMVFKSALEANGHVKGINVKGEANNFSRKAIDKLTDIVKTYKAKGLAWLKVKDG 356

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHIAQE 423
           ++      GP+AK  +      +   +D  DGD   F+        C   A  RNH+ +E
Sbjct: 357 KA-----EGPIAKFFSDEQMIRLLTAMDASDGDLLLFVSDAKYNVVCDALAALRNHLGKE 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   + + F W++DFP +E++EE K+    H+PFT P+        ND  +  A  YD
Sbjct: 412 LKLYRQDEYAFLWVVDFPMFEYDEETKRYYAVHHPFTRPKDSDLDKIENDPANCLADAYD 471

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NGFE+  G  R +  E+  +AF  +G ++E + ++FG    AFQ G PPHGG A G+
Sbjct: 472 IVLNGFELGGGSQRIYEQELQERAFRALGFTQERINSQFGWFVEAFQYGTPPHGGFALGL 531

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ M+L  ++N+REV  FP + +    +  +P  V  EQL EL + ++E+ 
Sbjct: 532 DRLAMILTNSENIREVIAFPKNASAVCPMSKAPGKVDKEQLDELKIAVIEDE 583


>gi|257885348|ref|ZP_05665001.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257821204|gb|EEV48334.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 589

 Score =  616 bits (1588), Expect = e-174,   Method: Composition-based stats.
 Identities = 228/590 (38%), Positives = 330/590 (55%), Gaps = 10/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+     +EIA
Sbjct: 4   RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V  R    +N  + TG+ E+ A +I IL+ A+  P  +  ++   +
Sbjct: 64  DKCRSEYVIEVTGKVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KNI  R     ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E      V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEVRGIE-VTLPFPRMTYDEAMARYGSDKPDTRFDMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++     EF+VF   L      +           +R   D++ ++    G  GLA++   
Sbjct: 302 SDTVKEVEFKVFQMALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK +    TEAI    D + GD   F A       +     R  + +
Sbjct: 362 ED-----GLKGPIAKFMG-EATEAIIKATDAKPGDLLMFGADKSEIVAAALGAIRTRLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP+     L   D   + A  Y
Sbjct: 416 ELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAEAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  E+  +    +G +KE +E +FG L  A   G PPHGGIA G
Sbjct: 476 DIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQMEEQFGFLLTALDYGFPPHGGIALG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR  MLL G  N+REV  FP +    D++  +PS VS  QL EL + + 
Sbjct: 536 LDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585


>gi|331086130|ref|ZP_08335212.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330406289|gb|EGG85803.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 596

 Score =  616 bits (1588), Expect = e-174,   Method: Composition-based stats.
 Identities = 230/596 (38%), Positives = 346/596 (58%), Gaps = 11/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFE 60
            R+H C +L  +++G  V + GWV + R  GGI+F+D+RD  G+ Q++      D A FE
Sbjct: 9   KRSHRCAELSKANIGETVTVMGWVQKNRNKGGIVFVDLRDRSGLLQIIFENGSIDEAGFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ + G V +RS   +N N+ TG+IE+ A++I ILS +E  P P+    + 
Sbjct: 69  KAGKLRSEFVIAVVGTVEARSG-AVNENLATGEIEIRAREIRILSESETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR  L +N++ R++     R  +  E F+E  TP+L  S+PEGARD+
Sbjct: 128 KEELRLKYRFLDLRRPDLQRNLMMRSKAATLTRQFLAEEGFLEIETPMLIKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G+FYALPQ+PQ +KQLLM SG+DRYFQI  CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGNFYALPQSPQIFKQLLMCSGYDRYFQIVKCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E +L  +F+E      VS    R+ + +A+ R+G+DKPD+R  + + 
Sbjct: 247 LSFVDVDDVIDVNERLLAKLFKEILGVE-VSLPIPRMTWQEAMDRFGSDKPDIRFGMELV 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E     EF VF   L             +G    R   D++ ++A+  G  GLAYI 
Sbjct: 306 DVSEVVKDCEFVVFKNALENGGSVRGINAKGQG-AMPRKKIDKLVDFAKDFGAKGLAYIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D           AK ++     A+   +  ++GD   F A           + R  I
Sbjct: 365 IQEDG----TVKSSFAKFMSEEEMHALIEAMGGENGDLLLFAADKNKVVWDVLGNLRLEI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L I++   + F W+ +FP  EWNEE  +    H+PFTMP      L   D   ++A 
Sbjct: 421 ARQLEILDKGDYRFLWVTEFPLLEWNEEAGRYTAMHHPFTMPMEEDLDLLDTDPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R    E+  + F  +G ++E  E +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTELGGGSVRIFNQEIQNKMFEVLGFTREQAEEQFGFLLSAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+    ++R+V  FP  ++  DL+  +P+ V  +QL ELGL I +  +
Sbjct: 541 YGLDRLIMLMAKEDSIRDVIAFPKVKDASDLMTEAPAAVDRKQLEELGLEIAKVEE 596


>gi|295398026|ref|ZP_06808082.1| aspartate--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973784|gb|EFG49555.1| aspartate--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 589

 Score =  616 bits (1588), Expect = e-174,   Method: Composition-based stats.
 Identities = 221/590 (37%), Positives = 337/590 (57%), Gaps = 10/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R+  CG++    VG  V L GWV + R  GG+IF+D+RD  GI Q V N ++    F  A
Sbjct: 3   RSVYCGNVSNEFVGQTVTLKGWVQKRRDLGGVIFVDLRDREGIVQAVFNVENLGDQFAEA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +RSE+V+ + G V+ R     N  I TG IE+    + IL++++  P PV  + +  +
Sbjct: 63  ERLRSEYVIEVTGEVVLRGEGLANPKIKTGDIEVMVSDLTILNISKTPPFPVEDDIDVND 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR++DLRR  +  N+  R ++++++   +  + FIE  TP LT S+PEGARD+LV
Sbjct: 123 EIRMKYRYVDLRRPKMANNMKLRHQVVSTIHRYLDDQEFIEVETPYLTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM++G DRY+Q+  CFRDED R DR P EF Q+D+E +
Sbjct: 183 PSRVHPGEFYALPQSPQLFKQLLMSAGMDRYYQVVRCFRDEDLRGDRQP-EFTQIDLETT 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q++I + +E +L+ V +   N +   N F  I YDDA+ RYG DKPD R  + +  +
Sbjct: 242 FLTQEEIRDLVEGMLKTVVKRTKNIDITEN-FPIITYDDAMARYGNDKPDTRFGLELVEI 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++     EF+VF++ +      +   I   G   +R   D +  +A + G  G+A+I   
Sbjct: 301 SDIVDQYEFKVFNQAIEKGGIVKAINIKGAGDNYSRKDLDNLTPFASTYGAKGVAWIKVT 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                +    GP+ K     N   +  RL  + GD   F+A          ++ R    +
Sbjct: 361 -----DEGLSGPIGKFFKD-NPAPLMDRLQAETGDVLVFVADKESVVNQSLSEIRLKFGR 414

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +++ N F F W+ ++P  E++E+ K+ +  H+PFTMP          +   + A  Y
Sbjct: 415 ELDLMDKNQFNFLWVTNWPLLEYDEDTKRFNAMHHPFTMPNEEDVDKLAENPEDVYAQAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+EI  G +R +  ++ +Q F  +G ++E   ++FG L  A   G PPHGG+A G
Sbjct: 475 DIVLNGYEIGGGSLRIYQKDMQMQMFKALGFTEESAISQFGFLLNALDYGFPPHGGLALG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR+VMLL G +N+REV  FP +    D L  +PS VS +QL EL L I 
Sbjct: 535 LDRLVMLLAGEENIREVIAFPKNGRAFDPLTEAPSQVSEQQLEELSLSIT 584


>gi|293571372|ref|ZP_06682403.1| aspartyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291608588|gb|EFF37879.1| aspartyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 589

 Score =  615 bits (1587), Expect = e-174,   Method: Composition-based stats.
 Identities = 229/590 (38%), Positives = 332/590 (56%), Gaps = 10/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+     +EIA
Sbjct: 4   RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G+V  R    +N  + TG+ E+ A +I IL+ A+  P  +  ++   +
Sbjct: 64  DKCRSEYVIEVTGIVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KNI  R     ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E      V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEVRGIE-VALPFPRMTYDEAMARYGSDKPDTRFEMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E     EF+VF   L      +           +R   D++ ++    G  GLA++   
Sbjct: 302 SETVKEVEFKVFQMALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK + +  TEAI    D + GD   F A       +     R  + +
Sbjct: 362 ED-----GLKGPIAKFM-VEATEAIIKATDAEPGDLLMFGADKSEIVAAALGAIRTRLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP+     L   D   + A  Y
Sbjct: 416 ELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKAEDIPLLAEDPAKVYAEAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  E+  +    +G +KE +E +FG L  A   G PPHGGIA G
Sbjct: 476 DIVLNGYELGGGSIRIHTRELQEKVLKTLGFTKEQMEEQFGFLLTALDYGFPPHGGIALG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR  MLL G  N+REV  FP +    D++  +PS VS  QL EL + + 
Sbjct: 536 LDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585


>gi|257465380|ref|ZP_05629751.1| aspartyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257451040|gb|EEV25083.1| aspartyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 587

 Score =  615 bits (1587), Expect = e-174,   Method: Composition-based stats.
 Identities = 218/592 (36%), Positives = 333/592 (56%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S VG  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F++A 
Sbjct: 2   RSHYCGALNRSHVGQAVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEAIFKVAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++RSE  + I G V++R    IN  + TG+IE+  + + + + A+   LP+   +   E 
Sbjct: 62  ALRSEACVQIQGEVIARDEAQINKEMATGEIEVLVKNVLVYNNAD--VLPLDFNQNNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   ME ++ G++ +  N +     F  + + +A+ R+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEEVRAVMEEMIHGLWLDRLNVD--LGKFPMMTWQEAMDRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 297 DILKNVEFKVFNEPANSPDGRVTVLRVPNGATLTRKQIDEYTQFVGIYGAKGLAWAKIND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN    +A+  R   Q+GD  FF A             R  + ++
Sbjct: 357 VNAGMEGIQSPVAKFLNEEVFKALIERTSAQNGDILFFGADKWQVVTDSMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ +   ++  W++DFP +E + +E  +   H+PFT P+G        D +   A  YD
Sbjct: 417 LGLTDLTAWKPLWVVDFPMFERD-DEGNLSAMHHPFTSPKGLSPEELAADPVKAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F+ +GI++E    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIFDPKMQQTVFNILGINEEEQAEKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L EL + +    
Sbjct: 536 DRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSYANPQALEELAIAVTAKE 587


>gi|69247937|ref|ZP_00604553.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Enterococcus
           faecium DO]
 gi|257880301|ref|ZP_05659954.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257882156|ref|ZP_05661809.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257890960|ref|ZP_05670613.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894215|ref|ZP_05673868.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258614751|ref|ZP_05712521.1| aspartyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260562395|ref|ZP_05832909.1| aspartyl-tRNA synthetase bacterial [Enterococcus faecium C68]
 gi|261209230|ref|ZP_05923622.1| aspartyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289566146|ref|ZP_06446581.1| aspartyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293552797|ref|ZP_06673457.1| aspartyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|293560707|ref|ZP_06677186.1| aspartyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|294614201|ref|ZP_06694121.1| aspartyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294622237|ref|ZP_06701297.1| aspartyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314938574|ref|ZP_07845858.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314940919|ref|ZP_07847825.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314952055|ref|ZP_07855078.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314991937|ref|ZP_07857392.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314995195|ref|ZP_07860309.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68194639|gb|EAN09126.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Enterococcus
           faecium DO]
 gi|257814529|gb|EEV43287.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257817814|gb|EEV45142.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257827320|gb|EEV53946.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830594|gb|EEV57201.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260073319|gb|EEW61660.1| aspartyl-tRNA synthetase bacterial [Enterococcus faecium C68]
 gi|260076776|gb|EEW64511.1| aspartyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289162091|gb|EFD09956.1| aspartyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291592977|gb|EFF24566.1| aspartyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291598279|gb|EFF29372.1| aspartyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291603044|gb|EFF33236.1| aspartyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291605298|gb|EFF34753.1| aspartyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313590604|gb|EFR69449.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313593521|gb|EFR72366.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313595845|gb|EFR74690.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313600277|gb|EFR79120.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313642131|gb|EFS06711.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133a04]
          Length = 589

 Score =  615 bits (1587), Expect = e-174,   Method: Composition-based stats.
 Identities = 228/590 (38%), Positives = 330/590 (55%), Gaps = 10/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+     +EIA
Sbjct: 4   RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V  R    +N  + TG+ E+ A +I IL+ A+  P  +  ++   +
Sbjct: 64  DKCRSEYVIEVTGEVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KNI  R     ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E      V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEVRGIE-VTLPFPRMTYDEAMARYGSDKPDTRFDMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++     EF+VF   L      +           +R   D++ ++    G  GLA++   
Sbjct: 302 SDTVKEVEFKVFQMALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK +    TEAI    D + GD   F A       +     R  + +
Sbjct: 362 ED-----GLKGPIAKFMG-EATEAIIKATDAKPGDLLMFGADKSEIVAAALGAIRTRLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP+     L   D   + A  Y
Sbjct: 416 ELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAEAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  E+  +    +G +KE +E +FG L  A   G PPHGGIA G
Sbjct: 476 DIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQMEEQFGFLLTALDYGFPPHGGIALG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR  MLL G  N+REV  FP +    D++  +PS VS  QL EL + + 
Sbjct: 536 LDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585


>gi|251793073|ref|YP_003007799.1| aspartyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534466|gb|ACS97712.1| aspartyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 592

 Score =  615 bits (1587), Expect = e-174,   Method: Composition-based stats.
 Identities = 212/594 (35%), Positives = 336/594 (56%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  +++G  + LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RSHYCGALNRTNIGQEITLSGWVHRRRDLGGLIFIDMRDREGIVQVCFDPKYQEALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+ ++I + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIQGEVIARPDNQINKNMATGEVEVLAKVLKIYNTSD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +++  R +I   +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQHLKIRAKITGFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G+++     +     FL + + +A+ R+G+DKPDLRNP+ + +V 
Sbjct: 240 LTAPEVREIMERMVHGLWQHILGVD--LGKFLVMTWQEAMTRFGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKNVEFKVFNEPANNPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK LN    +A+  R+  Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPIAKFLNENVWKALAERVKAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E + +E  +   H+PFT P+         +     A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFERD-DEGNLAAMHHPFTSPKDFTPEQLEAEPTDAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI+++    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFRILGINEQEQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+ MLL G +N+R+V  FP +     L+  +PS  + + L EL +++V+  K+
Sbjct: 537 DRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQALTELSIQVVKIGKE 590


>gi|219871764|ref|YP_002476139.1| aspartyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254781735|sp|B8F789|SYD_HAEPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219691968|gb|ACL33191.1| aspartyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 590

 Score =  615 bits (1587), Expect = e-174,   Method: Composition-based stats.
 Identities = 216/593 (36%), Positives = 334/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  + VG  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+ A 
Sbjct: 3   RSHYCGVLNRTHVGEQVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEALFKQAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E  + I G V++R    IN  + TG+IE+  +++ + + +E   LP+   +   E 
Sbjct: 63  ALRAEACVQIKGEVIARDTSQINKEMATGEIEVLVKELVVYNNSE--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAERLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E +F
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDVETTF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++RG++ +  N +     F ++ + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 240 MTAPEVRAMMEKMIRGLWLDRLNVDLGE--FPQMTFAEAMRRYGSDKPDLRNPLELVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   ++  + G  GLA+     
Sbjct: 298 DILKDVEFKVFSGPANDPEGRVAVIRVPNGAEITRKQIDEYTQFVGNYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L     +A+  R++ Q+GD  FF A             R  + ++
Sbjct: 358 VNAGLEGLQSPIAKFLTDDVVKALLARVNAQNGDIIFFGADSEKVVTDAMGALRLKVGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ +   ++  W++DFP +E + +E      H+PFT P+         +     A  YD
Sbjct: 418 LGLTDLTAWKPLWVVDFPMFEKD-DEGNWSAMHHPFTAPKDLSPEELVQNPKGAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI++E  + +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFGILGINEEEQKEKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L EL ++     +
Sbjct: 537 DRLTMLITGTENIRDVIAFPKTTAAACLMTDAPSFGNPKALAELAIQTTVEKE 589


>gi|295091162|emb|CBK77269.1| aspartyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 601

 Score =  615 bits (1587), Expect = e-174,   Method: Composition-based stats.
 Identities = 229/600 (38%), Positives = 350/600 (58%), Gaps = 11/600 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
            R+H C +L   ++G  V + GWV + R  GGIIF+D+RD  G+ Q++          F 
Sbjct: 9   KRSHRCTELSTENIGENVTVMGWVQKSRNKGGIIFVDLRDRSGLLQIIFEEADCGSESFA 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ + G V +RS   +N N+ TG IE+ A  + ILS +E  P P+    + 
Sbjct: 69  KAEKLRSEFVIAVTGKVEARSG-AVNENLKTGAIEIRANALRILSESETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  L KN++ R+R+    R  +  E F+E  TP L  S+PEGARD+
Sbjct: 128 KEELRLKYRYLDLRRPDLQKNLMTRSRVTTLTRAFLAEEGFLEIETPTLIKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+L+  E +L+ +F+E    + +     R+ + +A+ R+G+DKPDLR  + + 
Sbjct: 247 LSFVDVDDVLDVNERLLKKLFKEICGFD-LQLPIQRMTWREAMDRFGSDKPDLRFGMELK 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+E     +F VF   L             + G   R   D + E+A+  G  GLAY+ 
Sbjct: 306 NVSETVKDCQFVVFKSALENGGSVRGINAEGQAG-MPRKKIDALVEFAKGFGAKGLAYLA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D     +     AK +      A+   +D + GD   F A           + R  +
Sbjct: 365 VLEDG----SYKSSFAKFMTEEELHALVKAMDGKPGDLLLFAADRDKVVFDVLGNLRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L ++  + F+F W+ +FP  E++EE+ +    H+PFTMP     +L   D  +++A 
Sbjct: 421 ARQLDLLKKDDFKFLWVTEFPLLEYSEEQGRFVAMHHPFTMPMEEDLALIDTDPGAVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H S++  + F  +G +KE    +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTEMGGGSVRIHQSDIQSKMFEVLGFTKEQANEQFGFLLEAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DR+VML++GA ++R+V  FP  ++   L+  +PS V  +QL+ELG+ + +  ++  +
Sbjct: 541 YGLDRMVMLMVGADSIRDVIAFPKVKDASCLMTEAPSPVDEKQLKELGIEVSQEEEQKAE 600


>gi|241889468|ref|ZP_04776768.1| aspartyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863864|gb|EER68246.1| aspartyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 590

 Score =  615 bits (1587), Expect = e-174,   Method: Composition-based stats.
 Identities = 221/597 (37%), Positives = 342/597 (57%), Gaps = 10/597 (1%)

Query: 1   MHRY-RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSA 57
           M  Y RT   G +    VG  V L GWV + R  G +IF+D+RD  G+ Q V     ++ 
Sbjct: 1   MSAYGRTEYAGRIDEKYVGKKVTLKGWVSKRRDLGNLIFIDVRDRMGVVQCVFSGEKNAE 60

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+A ++R+E+V+ I+G V+ R+  T+N  I +G++E+ A K+EILS A+ LP  +   
Sbjct: 61  LHELAGTLRNEFVVSIEGEVVLRNESTVNEKIASGKVEVIADKLEILSKAKTLPFVLDDA 120

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R KYR+LDLRR  L + +  R++I  + R  +    F++  TPILT S+PEGA
Sbjct: 121 SLSSEELRLKYRYLDLRRTELAEVLHLRSKITKATRDYLDNNMFVDVETPILTKSTPEGA 180

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV+ G FYALPQ+PQ +KQLLM +GFDRY+Q+A CFRDED R+DR P +F Q+
Sbjct: 181 RDYLVPSRVHPGEFYALPQSPQLFKQLLMIAGFDRYYQVARCFRDEDLRADRQP-DFTQI 239

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF+ Q++IL  +E ++  V +E    + V   F R+ Y++A+ R+G+DKPD R  +
Sbjct: 240 DMEMSFMSQEEILTMIEGLIAHVMKEVKGIDVV-LPFPRLDYEEAMERFGSDKPDTRFGM 298

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + +V++   + +F+VFS  +      +           +R   D + ++  + G  GLA
Sbjct: 299 ELKDVSDLVKNLDFKVFSNAVEQGGAVKCIVAKGCAEQYSRKDIDALGKYVANYGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++             G +AK       + +  R+D + GD   F A       +     R
Sbjct: 359 WVKVT-----EEGLNGAIAKFFTDEVAQELVARVDAEVGDIILFAADSKKVCYASLGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A +L +I+ + + + W++++P  E++EE+ +   AH+PFTMP+     L        
Sbjct: 414 QKLAADLDLIDKDKYNYLWVVNWPLLEYDEEKGRYSAAHHPFTMPKVEDVELLEAAPEKA 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+E+  G IR +  EV    F  +G ++E  + +FG L  AF+ G+PPHG
Sbjct: 474 YAQAYDIVLNGYELGGGSIRIYDKEVQSSMFKALGFTQEQAQEQFGFLLDAFEYGVPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G A G+DR VMLL G  N+R+   FP + N  D +  +PS V +EQL EL + ++  
Sbjct: 534 GCALGLDRFVMLLAGRDNLRDTIAFPKTANAADPMTQAPSPVDLEQLLELNISLLRK 590


>gi|85712315|ref|ZP_01043366.1| Aspartyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85693942|gb|EAQ31889.1| Aspartyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 590

 Score =  615 bits (1587), Expect = e-174,   Method: Composition-based stats.
 Identities = 208/594 (35%), Positives = 331/594 (55%), Gaps = 9/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RTH CG +        V L GWV++ R  GG+IF+D+RD  G+ QVV +PD    FE A 
Sbjct: 2   RTHYCGQVTAELAEQEVTLCGWVNKRRDLGGLIFIDLRDREGLVQVVFDPDENALFEQAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R E+ + I G V  R    +NAN+ TG++E+ A+++ ILS +E   LP+    +  E 
Sbjct: 62  RLRQEFCVQIRGKVNRRPDSQVNANMKTGEVEILAKELTILSRSEP--LPIDFNSQVSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  +++N+  R ++ +++R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLRYRYLDLRRPQMNENLQFRAKVASAVRRFLDDNGFLDIETPMLTRATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRTHKGRFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + ++   E + R +F++  + +     F  + + +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSAEQVMEVTETMTRQLFQQLLDID--LGKFPTMTWHEAMRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +       V  +P +    +R   D   ++    G  GLA+I   
Sbjct: 297 DLLKDVEFKVFSGPANDEKGRVAVIRLPGQADNVSRKMIDEYTQFVGIYGAKGLAWIKVN 356

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K L      AI  R +   GD  FF +             R  + +
Sbjct: 357 DLSQGREGLQSPILKFLPDEALNAILERTEAATGDILFFGSDKANVVAEAMGALRLKLGE 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              +++ + +   W++DFP +E +++  ++   H+PFT P          +     +  Y
Sbjct: 417 TFELVS-DEWRPLWVVDFPMFEEDDD-GRLAAMHHPFTAPVNVTPEELKANPAQALSNAY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R H + +   AF  +GI  E  + +FG L  A + G PPH G+A G
Sbjct: 475 DMVLNGVEVGGGSVRIHDNAMQQAAFEVLGIGAEEAKEKFGFLLEALKYGTPPHAGLAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR+VML++GA ++R+V  FP +     +L  +P   + + L+ELG++     K
Sbjct: 535 LDRLVMLMVGASSIRDVIAFPKTTTAACVLTDAPGLANPDALQELGVKSTVEDK 588


>gi|91205164|ref|YP_537519.1| aspartyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157827498|ref|YP_001496562.1| aspartyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|123084585|sp|Q1RJN4|SYD_RICBR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225383|sp|A8GXC5|SYD_RICB8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91068708|gb|ABE04430.1| Aspartyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157802802|gb|ABV79525.1| aspartyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 602

 Score =  615 bits (1587), Expect = e-174,   Method: Composition-based stats.
 Identities = 304/605 (50%), Positives = 415/605 (68%), Gaps = 10/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           MH+YRTH+C +L +SDVG+ V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 1   MHKYRTHNCNELKISDVGAEVKLSGWVHRRRDHGNLVFVDLRDHYGITQIVFTDQNPQLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A  +R E V+ + G V++RS ETIN  + TG IE+ A +  + S A+ LP  +  E++
Sbjct: 61  DDASRLRYESVVTVIGKVVARSEETINNTLPTGHIEVLAGEFIVESAADTLPFVINTEKD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 121 APEDSRLKHRFLDLRREKLHNNIMLRSQIISYIRQLMTARGFTEFQTPILTASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+DI +T+E V+  +F +F++       F+RI Y++++ +YG+DKPDLRNPI++
Sbjct: 241 EMSFVTQEDIFSTIEPVMYELFTKFTDKKVSEAPFIRIPYNESMLKYGSDKPDLRNPIVI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTE F  S+F +F + +           P       R+F D+M E+A S+G  GL YI
Sbjct: 301 ADVTEIFRDSDFTIFRENIKKGSIVRAIPAP-YAAAQPRSFFDKMIEFAISEGAGGLGYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +    S      GPVAK L+    E ++   ++ +GD+ FF +    K    A   R  
Sbjct: 360 QF----SETGEAKGPVAKFLSTQQLEDLKATANISNGDAVFFASDKKDKAAKLAGKVRIK 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----NDLL 475
           +A EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+E+L+      +LL
Sbjct: 416 LADELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGLEALENAKTTEELL 475

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + A+QYD+VCNG E++SG +RNH  E+M +AF+  G S+E V+ RFGG+ RAF+ G PP
Sbjct: 476 ELTAYQYDIVCNGIELSSGAVRNHKPEIMYKAFAIAGYSEEEVDKRFGGMIRAFKFGAPP 535

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +P+ V  + L+EL + +  + 
Sbjct: 536 HGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPNYVEDKALKELNVMLSPSA 595

Query: 596 KKILK 600
           +K  +
Sbjct: 596 RKNAE 600


>gi|16800622|ref|NP_470890.1| aspartyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|24212412|sp|Q92BJ4|SYD_LISIN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|16414041|emb|CAC96785.1| aspartyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 591

 Score =  615 bits (1586), Expect = e-174,   Method: Composition-based stats.
 Identities = 227/597 (38%), Positives = 335/597 (56%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNETHIGQSVILHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +    
Sbjct: 60  LEIADSVRNEFVVTIKGKVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +++I    E++L  V +E  N       F R+ Y +A+ R+G+DKPD+R  + 
Sbjct: 239 LETSFLTKEEIQAITEDMLVDVVKEAKNITI-EKPFPRMTYKEAMDRFGSDKPDIRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + NV+E     +F+VF   +      +     A     +R   D +  +  + G  GLA+
Sbjct: 298 LQNVSEVVKDVDFKVFQSAIENGGEVKAINAKAAATNFSRKDLDALGVFVANYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E+G +   GP+AK         ++  L  +DGD   F A       +     RN
Sbjct: 358 LKI---EAGELK--GPIAKFFPEDKAAELQAALQAEDGDLLLFAADKADIVAASLGALRN 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++L +IN +   F W+ D+P +E++EE  +   AH+PFT+P+         D   + 
Sbjct: 413 KLGKDLDLINEDELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPFLETDSSKVM 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGG
Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMEALEYGTPPHGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 533 IALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSAAQLAELKLETVKKE 589


>gi|254518566|ref|ZP_05130622.1| aspartyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226912315|gb|EEH97516.1| aspartyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 594

 Score =  615 bits (1586), Expect = e-174,   Method: Composition-based stats.
 Identities = 230/595 (38%), Positives = 342/595 (57%), Gaps = 13/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG++  ++V   + L GWV R R  GG+ F+D+RD  GI Q+V     ++  FE 
Sbjct: 9   KRTLMCGEVRENNVSQKITLMGWVQRNRKLGGLQFIDLRDRTGIMQIVFGEAINAEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK VR E+ + + G V+ R A   N N+ TG +EL  + ++ILS ++  P+ +    +  
Sbjct: 69  AKDVRPEYCIAVTGEVVLREAP--NHNMPTGLVELKCESLKILSESDTPPIYIKEGLDAA 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           ESIR KYR+LDLRR  + +  + R RI  S+R  +   NF+E  TP+LT S+PEGARD+L
Sbjct: 127 ESIRLKYRYLDLRRPDMQRIFMIRNRISKSVRDYLDDNNFLEVETPMLTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R++R P EF Q+D+EM
Sbjct: 187 VPSRNYPGMFYALPQSPQIFKQLLMVSGFDRYYQIVKCFRDEDLRANRQP-EFTQIDLEM 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D++   E ++  VF+E +  + V     R+ + DA+ +YG+DKPDLR  + + N
Sbjct: 246 SFVEQEDVIKMNEGLIAHVFKEVAGVD-VKLPIKRMTFKDAMEKYGSDKPDLRFGMEITN 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F VF   +          +   G    R   D++ E+ ++    GLA+I  
Sbjct: 305 ITEDVKDMDFVVFKSAIEAGGSVRALCLK-GGADLGRKPIDKLGEFVKTYKAKGLAWIQL 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D          +AK L    T +I   +  + GD+ F +A             R  +A
Sbjct: 364 KED-----GVKSSIAKFLTDDVTNSIVKTMGAEVGDAIFIVADKNSVVFQSLGALRLELA 418

Query: 422 QELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           ++  +I + N F F WI +FP +E++EEE +   AH+PFT P      +   +   +++ 
Sbjct: 419 KQFDLIKDKNEFNFTWITEFPLFEYDEEEGRYHAAHHPFTSPMDEDIDMLETNPGEVRSK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H S++  + F  +G ++E  + RFG L  AF+ G PPHGG+A
Sbjct: 479 AYDLVLNGEELGGGSIRIHDSKLQQKMFKALGFTEESAQERFGFLIDAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+DR+VM L G +N+++V  FP +QN    L  +P+    +QL+ELG+ I    
Sbjct: 539 FGLDRMVMFLAGTENIKDVIAFPKNQNAYCYLSEAPNIADEKQLQELGISINTKE 593


>gi|326803472|ref|YP_004321290.1| aspartate--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651322|gb|AEA01505.1| aspartate--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 589

 Score =  615 bits (1586), Expect = e-174,   Method: Composition-based stats.
 Identities = 225/593 (37%), Positives = 337/593 (56%), Gaps = 10/593 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FE 60
             RT+ CG +    +G  V L GWV R R  GG+IF+D+RD  G  QVV N  +    F 
Sbjct: 1   MKRTNYCGLVSNEMIGQEVTLKGWVQRRRDLGGVIFVDMRDREGFVQVVFNEANLGDHFN 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ + G V++R+   IN  I  G IE+ A  + IL+ A+  P PV    + 
Sbjct: 61  RAEKLRSEYVIEVQGQVVARAEGEINPKIKNGDIEVMASDLTILNRAKTPPFPVEDTIDV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR++DLRR  +  NI  R+++ +++R  +  + F++  TP L+ S+PEGARD+
Sbjct: 121 NEDKRMQYRYIDLRRQRMQDNIRLRSQVTHAIRSFLDQDGFLDIETPYLSKSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ  KQLLMASGFDRY+QI  CFRDED R DR P EF Q+D+E
Sbjct: 181 LVPSRVHPGEFYALPQSPQLLKQLLMASGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDLE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ Q++I + +EN+L+ V ++    +   + F  I YD+A+ RYG+DKPD R  + + 
Sbjct: 240 TSFLSQEEIRDIVENMLKAVMKQVKGLDMTED-FPVISYDEAMSRYGSDKPDTRFGLELV 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++     +F+VF+  +      +   I       +R   D +  + +  G  G+A+I 
Sbjct: 299 DLSDIVDQYDFKVFNMAIENGGIVKGINIKGAADQYSRKDLDGLTPYTKPFGSKGIAWIK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+ K       + +  R++ + GD   F A       +   + R   
Sbjct: 359 VTED-----GLTGPIGKFFK-EKPQPLMERMNAEAGDILVFSADQASVVNASLGEVRIKF 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ N F F W++D+P  E+N +EK+    H+PFTMP         ++  S+ + 
Sbjct: 413 GRELDLMDNNQFNFLWVVDWPLLEYNADEKRYTAMHHPFTMPNEEDLDRLESEPESVYSQ 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G IR H  EV L     +G S+E    +FG L  A   G PPHGG+A
Sbjct: 473 AYDIVLNGYEIGGGSIRIHQKEVQLAMLKALGFSEEKANQQFGFLLDALDYGFPPHGGLA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR+VML+ G  N+REV  FP +    D+L  +PS VS +QL EL L + +
Sbjct: 533 IGLDRLVMLIAGEDNIREVMAFPKNGRAVDVLTDAPSPVSDKQLDELNLEVTK 585


>gi|325662327|ref|ZP_08150936.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325471329|gb|EGC74552.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 596

 Score =  615 bits (1586), Expect = e-174,   Method: Composition-based stats.
 Identities = 230/596 (38%), Positives = 346/596 (58%), Gaps = 11/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFE 60
            R+H C +L  +++G  V + GWV + R  GGI+F+D+RD  G+ Q++      D A FE
Sbjct: 9   KRSHRCAELSKANIGETVTVMGWVQKNRNKGGIVFVDLRDRSGLLQIIFENGSIDEAGFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ + G V +RS   +N N+ TG+IE+ A++I ILS +E  P P+    + 
Sbjct: 69  KAGKLRSEFVIAVVGTVEARSG-AVNENLATGEIEIRAREIRILSESETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR  L +N++ R++     R  +  E F+E  TP+L  S+PEGARD+
Sbjct: 128 KEELRLKYRFLDLRRPDLQRNLMMRSKAATLTRQFLAEEGFLEIETPMLIKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G+FYALPQ+PQ +KQLLM SG+DRYFQI  CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGNFYALPQSPQIFKQLLMCSGYDRYFQIVKCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E +L  +F+E      VS    R+ + +A+ R+G+DKPD+R  + + 
Sbjct: 247 LSFVDVDDVIDVNERLLAKLFKEILGVE-VSLPIPRMTWQEAMDRFGSDKPDIRFGMELV 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E     EF VF   L             +G    R   D++ ++A+  G  GLAYI 
Sbjct: 306 DVSEVVKDCEFVVFKNALENGGSVRGINAKGQG-AMPRKKIDKLVDFAKDFGAKGLAYIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D           AK ++     A+   +  ++GD   F A           + R  I
Sbjct: 365 IQEDG----TVKSSFAKFMSEEEMHALIEAMGGENGDLLLFAADKNKVVWDVLGNLRLEI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L I++   + F W+ +FP  EWNEE  +    H+PFTMP      L   D   ++A 
Sbjct: 421 ARQLEILDKGDYRFLWVTEFPLLEWNEEAGRYTAMHHPFTMPMEEDLDLLDTDPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R    E+  + F  +G ++E  E +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTELGGGSVRIFNQEIQNKMFEVLGFTREQAEEQFGFLLSAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+    ++R+V  FP  ++  DL+  +P+ V  +QL ELGL I +  +
Sbjct: 541 YGLDRLIMLMAKEDSIRDVIAFPKVKDASDLMTEAPAAVDRKQLEELGLEIAKIEE 596


>gi|306820421|ref|ZP_07454057.1| aspartate--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551496|gb|EFM39451.1| aspartate--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 593

 Score =  615 bits (1586), Expect = e-174,   Method: Composition-based stats.
 Identities = 232/593 (39%), Positives = 346/593 (58%), Gaps = 12/593 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG+L + +VG  V L GWV R R  G +IF DIRD  G+ Q+V + +     F+ 
Sbjct: 8   KRTAYCGELRIGNVGEDVVLMGWVQRSRDKGALIFTDIRDRSGLCQIVFDENTKEEVFKK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++ SE+V+ ++G V  RSA+  N+ + TG IE+ A  + IL+ ++  P+ +  + E  
Sbjct: 68  AETLGSEYVIAVEGTVRERSAK--NSEMETGDIEVFATNLLILNDSQTPPIYIKDDDEVS 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLR+  + +N V R ++ N++R  +    FIE  TPIL   +PEGARD+L
Sbjct: 126 ENLRLKYRYLDLRKPKMQRNFVLRQKVTNAVRNYLSESGFIEIETPILNKPTPEGARDYL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D EM
Sbjct: 186 VPSRVNNGKFYALPQSPQLFKQLLMVSGFDRYFQIARCFRDEDLRADRQP-EFTQIDCEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE +D++   E +++ +F+E  + + V    +R+ Y +A+ R+G+DKPDLR    + N
Sbjct: 245 SFVEPEDVMQMAEKMVQKIFKETLDVD-VKLPLMRMTYKEAMERFGSDKPDLRFGFEIQN 303

Query: 302 VTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++E      F VF    +          +       +R    ++ + A++ G  GLAYI 
Sbjct: 304 LSEVVKTCGFSVFENAANSPKSSVRAINVKGYEDKFSRKAITKLEDVAKTYGAKGLAYIK 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +            P+AK ++      I  ++D  +GD   F+A             R  +
Sbjct: 364 FT-----KEGINSPIAKFISEEKMNEILQKMDAAEGDLILFVADKDKIVFDALGHLRIEV 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++LG+I+ N ++  ++ +FP +E++EEE++    H+PFTMP      L   D   ++A 
Sbjct: 419 ARQLGLIDDNEYKLLFVTEFPQFEYDEEEQRFVAVHHPFTMPMDEDIELLDTDREKVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H S+V  + F  +G SKE    +FG L  AF+ G PPHGGIA
Sbjct: 479 AYDIVLNGVELGGGSIRIHDSKVQEKMFECLGFSKEDAWEKFGFLLEAFKYGTPPHGGIA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR VMLL    ++REV  FP +QN    L  +P+    + L ELG+++ E
Sbjct: 539 LGLDRFVMLLAKEDSIREVIAFPKNQNAICPLTSAPALADDKALAELGIKVTE 591


>gi|293566141|ref|ZP_06678544.1| aspartyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291590067|gb|EFF21859.1| aspartyl-tRNA synthetase [Enterococcus faecium E1071]
          Length = 589

 Score =  615 bits (1586), Expect = e-174,   Method: Composition-based stats.
 Identities = 228/590 (38%), Positives = 330/590 (55%), Gaps = 10/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+     +EIA
Sbjct: 4   RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V  R    +N  + TG+ E+ A +I IL+ A+  P  +  ++   +
Sbjct: 64  DKCRSEYVIEVTGEVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KNI  R     ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E      V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEVRGIE-VTMPFPRMTYDEAMARYGSDKPDTRFDMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++     EF+VF   L      +           +R   D++ ++    G  GLA++   
Sbjct: 302 SDTVKEVEFKVFQMALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK +    TEAI    D + GD   F A       +     R  + +
Sbjct: 362 ED-----GLKGPIAKFMGEA-TEAIIKATDAKPGDLLMFGADKSEIVAAALGAIRTRLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP+     L   D   + A  Y
Sbjct: 416 ELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAEAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  E+  +    +G +KE +E +FG L  A   G PPHGGIA G
Sbjct: 476 DIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQMEEQFGFLLTALDYGFPPHGGIALG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR  MLL G  N+REV  FP +    D++  +PS VS  QL EL + + 
Sbjct: 536 LDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585


>gi|218246650|ref|YP_002372021.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|226736532|sp|B7JX16|SYD_CYAP8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218167128|gb|ACK65865.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 598

 Score =  615 bits (1586), Expect = e-174,   Method: Composition-based stats.
 Identities = 235/601 (39%), Positives = 346/601 (57%), Gaps = 17/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CGDL  +D+   V L GWV R R HGG+IF+D+RD  GI Q+V++P      +  A
Sbjct: 2   RTHYCGDLRATDIEQTVTLFGWVDRRRDHGGVIFIDLRDRTGIVQIVSDPQRTPDSYPDA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
           +++R+E+V+ I G V  R  E++N  I TG++E+ A  IE+L+         +       
Sbjct: 62  ETLRNEYVVKIVGRVSQRPPESLNPKIPTGEVEIYANSIELLNGVNKQLPFVISSLEAEL 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRRD + KN+  R  ++ +MR  +   + F+E  TPILT S+PEGAR
Sbjct: 122 VREDVRLKYRYLDLRRDRMAKNLQLRHAVVKAMRRYLEDEQQFMEIETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR N G +YALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRANPGQWYALPQSPQLFKQLLMVAGCDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +++IL   E ++  +F+   N +     F R+ Y  A+ +YG D+PD R  + 
Sbjct: 241 MEMSFMSEEEILRLNEGLVCHIFKSVKNLDI-PRPFPRLTYAKAMEKYGNDRPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V++    S F+VFS+ +      ++  +P      +         +   A   G  G
Sbjct: 300 LVDVSDIVKDSGFKVFSEAVKTGGKVKILPVPGGNETISNVRIKPGGDLFREATEAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AYI  R+ E   +  +G +  +L       +  R   + GD   F AGD        + 
Sbjct: 360 IAYI--RVKEDNKLDTIGAIKDNLTEDQKLELLARTGAKSGDLLLFGAGDTDTVNKSLSR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  I ++LG+I+       WI +FP +EWN +EK+++  H+PFT P          DL 
Sbjct: 418 LRLVIGEQLGLIDPEKINLLWITEFPMFEWNADEKRLEALHHPFTAPNPEDLD----DLK 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NG E+  G +R +  +V  + F+ +G+S E   N+FG L  AF+ G PP
Sbjct: 474 TARAQAYDLVYNGVEVGGGSLRIYQKDVQEKVFATIGLSMEEAYNKFGFLLEAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL G  ++R+V  FP +Q    LL  +P+TV  +QL+EL ++    P
Sbjct: 534 HGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQASCLLTEAPATVDEKQLKELQVKSTYKP 593

Query: 596 K 596
           K
Sbjct: 594 K 594


>gi|294618766|ref|ZP_06698293.1| aspartyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291594954|gb|EFF26304.1| aspartyl-tRNA synthetase [Enterococcus faecium E1679]
          Length = 589

 Score =  615 bits (1586), Expect = e-174,   Method: Composition-based stats.
 Identities = 229/590 (38%), Positives = 330/590 (55%), Gaps = 10/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+     +EIA
Sbjct: 4   RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V  R    +N  + TG+ E+ A +I IL+ A+  P  +  ++   +
Sbjct: 64  DKCRSEYVIEVTGEVRRRGENAVNPKMATGEFEVIASEIVILNQAKTPPFQIEDDQAISD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KNI  R     ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E      V+  F R+ YD+AI RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEVRGIE-VTLPFPRMTYDEAIARYGSDKPDTRFDMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++     EF+VF   L      +           +R   D++ ++    G  GLA++   
Sbjct: 302 SDTVKEVEFKVFQMALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK +    TEAI    D + GD   F A       +     R  + +
Sbjct: 362 ED-----GLKGPIAKFMG-EATEAIIKATDAKPGDLLMFGADKSEIVAAALGAIRTRLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP+     L   D   + A  Y
Sbjct: 416 ELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAEAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  E+  +    +G +KE +E +FG L  A   G PPHGGIA G
Sbjct: 476 DIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQMEEQFGFLLTALDYGFPPHGGIALG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR  MLL G  N+REV  FP +    D++  +PS VS  QL EL + + 
Sbjct: 536 LDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585


>gi|332654810|ref|ZP_08420552.1| aspartate--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332516153|gb|EGJ45761.1| aspartate--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 599

 Score =  615 bits (1585), Expect = e-174,   Method: Composition-based stats.
 Identities = 225/598 (37%), Positives = 333/598 (55%), Gaps = 12/598 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACF 59
           + +RT+ CG+L +SD G  V + GWV R R  GG+IF+D+RD  G+ Q+  +   D A F
Sbjct: 6   NFHRTNYCGELRLSDAGKTVSVCGWVQRQRDLGGLIFVDLRDRTGLVQLSFDDSTDKAIF 65

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A ++RSE+V+   GLV  R ++T    I TG IE+   ++ +L+ AE  P  +    +
Sbjct: 66  EKASTLRSEYVIAATGLVRERESKTN--KIATGDIEIYVSELRLLAKAETPPFEIVENSK 123

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + +R KYR+LDLRR  +   I  R ++    R     + F+E  TP+LT S+PEGARD
Sbjct: 124 ANDMLRLKYRYLDLRRPDMQHAIATRHKVTKICRDYFDEQGFLEIETPMLTKSTPEGARD 183

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+ G FYALPQ+PQQYKQLLM SGFDRY QIA CFRDED R+DR P EF Q+D+
Sbjct: 184 YLVPSRVHPGKFYALPQSPQQYKQLLMLSGFDRYMQIARCFRDEDLRADRQP-EFTQIDL 242

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV +DD++   E  L+ VF+E  + + V   FLR+ + +A+ R+G+DKPDLR    +
Sbjct: 243 EMSFVNEDDVMGIQEGFLKRVFKEVLDVD-VQTPFLRMPWREAMDRFGSDKPDLRFGFEL 301

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++++      F VFS  +       +  +        R   D++ E+ ++    GLA+ 
Sbjct: 302 KDISDIVKDCGFGVFSGAVQGGGSVRLINVNGHAADFPRKKIDKLGEFVKTYKAKGLAWT 361

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARN 418
                +           K L     +AI  R   +DGD    +         +     R 
Sbjct: 362 RMHDGQ-----VTSSYQKFLTEEENKAILERAGAKDGDLILIVGDVKDEVVFAALGALRC 416

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
             A++LG+++   F+F W+ +FP +E++EEE +    H+PFT P          D  + +
Sbjct: 417 ECAKQLGLLDPKDFKFLWVTEFPMFEYSEEEGRYVAMHHPFTAPMDEDLDKLETDKKNCR 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G IR  + E     F  +G S E  + RFG L  AF+ G PPHGG
Sbjct: 477 AKAYDIVLNGTELGGGSIRISVPETQQAMFRALGFSDEDAQERFGHLINAFKFGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G+DR+ ML+ GA+++R+V  FP  QN  + +   P  V  +QL +L L +    +
Sbjct: 537 LAYGLDRLCMLMAGAESIRDVIAFPKVQNASEPMTNCPDFVDDKQLDDLSLAVTRREE 594


>gi|320194418|gb|EFW69049.1| aspartyl-tRNA synthetase [Escherichia coli WV_060327]
          Length = 577

 Score =  615 bits (1585), Expect = e-174,   Method: Composition-based stats.
 Identities = 215/580 (37%), Positives = 321/580 (55%), Gaps = 7/580 (1%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGL 76
           G  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G 
Sbjct: 2   GQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGT 61

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR 
Sbjct: 62  VRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRP 119

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ
Sbjct: 120 EMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQ 179

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME +
Sbjct: 180 SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEAL 238

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +R ++ E    +     F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+ 
Sbjct: 239 VRHLWLEVKGVD--LGYFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAG 296

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
             +   G         G    R   D    + +  G  GLAYI       G      PVA
Sbjct: 297 PANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVA 356

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K LN    EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W
Sbjct: 357 KFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLW 416

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           ++DFP +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +
Sbjct: 417 VIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSV 475

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+
Sbjct: 476 RIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNI 535

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 RDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 575


>gi|227355386|ref|ZP_03839787.1| aspartyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|227164610|gb|EEI49481.1| aspartyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 581

 Score =  615 bits (1585), Expect = e-174,   Method: Composition-based stats.
 Identities = 209/579 (36%), Positives = 325/579 (56%), Gaps = 6/579 (1%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGL 76
           G  V L GWV+R R  GG+IF+D+RD  GI QV  +P+    F  A  +R+E+ + + G 
Sbjct: 2   GQKVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPEQKEAFSQASELRNEFCIQVTGT 61

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V +R    +N N+ TG+IEL+A+ + I + +E   LP+   +   E  R  YR+LDLRR 
Sbjct: 62  VRARPDSQVNKNMATGEIELAAESLSIFNRSE--ALPLDSNQTNTEERRLTYRYLDLRRP 119

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + + +  R +I + +R  M  E F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ
Sbjct: 120 EMSQRLKTRAKITSFVRRFMDGEGFLDVETPMLTKATPEGARDYLVPSRVHKGKFYALPQ 179

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+  + +   ME +
Sbjct: 180 SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAEQVREVMERM 238

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +  ++ +  N +     F  + + +A+RRYG+DKPDLRNP+ + ++ +   + EF VF++
Sbjct: 239 IHALWLDILNVD--LGAFPVMTFAEAMRRYGSDKPDLRNPMELIDIADLVKNVEFSVFAQ 296

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
             +      +      G    R   D   ++    G  GLA++       G      P+A
Sbjct: 297 AANDEKCRVIALRVPGGASLTRKNIDEYTQFVSIYGAKGLAWMKVNEKAKGIEGVQSPIA 356

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K L      +I    +  DGD  FF AG            R  + ++L + + N ++  W
Sbjct: 357 KFLTNDVVNSILATTNATDGDLIFFGAGRQGTMSDAMGALRLKVGRDLELTDLNAWKPLW 416

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           ++DFP +E +E+   +   H+PFT P+    +      +   A  YD+V NG+E+  G +
Sbjct: 417 VIDFPMFEEDEDTGSLSAMHHPFTSPKDLTPAELTAHPVGAVANAYDMVINGYEVGGGSV 476

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H +E+    FS +GI+ +    +FG L  A + G PPH G+A G+DR+VMLL G  N+
Sbjct: 477 RIHRNEMQQAVFSILGITPDEQREKFGFLLDALKFGTPPHAGLAFGLDRLVMLLTGTDNI 536

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           R+V  FP +     L+  +PS  + + L+EL +++ E  
Sbjct: 537 RDVIAFPKTTAAACLMTNAPSFANEDALKELAIQVTEKE 575


>gi|171060683|ref|YP_001793032.1| aspartyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|238689079|sp|B1XWR8|SYD_LEPCP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|170778128|gb|ACB36267.1| aspartyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 598

 Score =  615 bits (1585), Expect = e-174,   Method: Composition-based stats.
 Identities = 226/594 (38%), Positives = 336/594 (56%), Gaps = 11/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+   G +    +G  V L GW HR R HGG+IF+D+RD  G+ Q+V +PD    F+ A+
Sbjct: 2   RSSYAGQVSEKLMGQTVTLMGWAHRRRDHGGVIFIDLRDREGLVQIVCDPDRAEMFKTAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ L I GLV +R + T NAN+++G++E+   ++E+L+ +   P  +  E    E+
Sbjct: 62  GVRNEFCLKIVGLVRARPSGTENANLVSGKVEVLCHELEVLNPSVTPPFQIDDENLS-ET 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  + KN++ R R+   +R  + A  FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 TRLTHRVLDLRRPQMQKNLMLRYRVSMEVRKFLDANGFIDIETPMLTKSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVNDGHFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    E ++R VF      +     +  + Y DA+ +YG+DKPDLR  +    +T
Sbjct: 240 LSEEEIRGMFEGMIRTVFRNTIGVDLPG--YPVMTYADAMHKYGSDKPDLRVKLQFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS       G  V      G   +R   D   E+ +  G  GLA+I    
Sbjct: 298 DVMRDVDFKVFSAPAQSKNGRVVALRVPGGADMSRGEIDGYTEFVKIYGAKGLAWIKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-- 421
              G      P+ K+L+      I  R  + +GD  FF A             R  +   
Sbjct: 358 VAKGREGMQSPIVKNLHDAAIAEIIARTGVCNGDLIFFGADKAKVVNDAIGALRVKVGHS 417

Query: 422 ---QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              ++ G+   + +   W++DFP +E ++E  + +  H+PFT P+ G E     D     
Sbjct: 418 DFGKKNGLF-EDKWAPLWVVDFPMFEHDDEGDRWNAVHHPFTAPKDGHEDYMDTDPGKCI 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R H +EV  + FS + I KE  + +FG L  A Q G PPHGG
Sbjct: 477 AKAYDMVLNGWELGGGSVRIHKAEVQSKVFSALKIGKEDAQVKFGFLLDALQYGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +A G+DRIV ++  A+++R+V  FP +Q    LL G+PS V  +QLREL +R+ 
Sbjct: 537 LAFGLDRIVTMMTRAESIRDVIAFPKTQRAQCLLTGAPSLVDEKQLRELHIRLR 590


>gi|257084828|ref|ZP_05579189.1| aspartyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257090252|ref|ZP_05584613.1| aspartyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|312902749|ref|ZP_07761953.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|256992858|gb|EEU80160.1| aspartyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256999064|gb|EEU85584.1| aspartyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|310633803|gb|EFQ17086.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315174311|gb|EFU18328.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315576680|gb|EFU88871.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 589

 Score =  615 bits (1585), Expect = e-174,   Method: Composition-based stats.
 Identities = 226/591 (38%), Positives = 332/591 (56%), Gaps = 10/591 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
            RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+     +EI
Sbjct: 3   KRTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A   RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    
Sbjct: 63  ADKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVN 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+L
Sbjct: 123 DELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F+  ++I    EN+L  V +E       S  F R+ YD+A+ RYG+DKPD R  + + +
Sbjct: 242 TFLTPEEIQTYTENMLAEVMKETKGIEI-SVPFPRMSYDEAMARYGSDKPDTRFAMELID 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V +     +F+VF   L      +           +R   D + ++    G  GLA++  
Sbjct: 301 VADVVKDVDFKVFQAALENGGHVKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWLKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK L    ++ +    + + GD   F A  P    +     R  + 
Sbjct: 361 EED-----GLKGPIAKFLT-EVSDELIAATNAEVGDILMFGADKPEIVAAALGAVRTRLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+         D  S+ A  
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVDRLATDPASVYAEA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA 
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIAL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 535 GLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|160893491|ref|ZP_02074276.1| hypothetical protein CLOL250_01042 [Clostridium sp. L2-50]
 gi|156864886|gb|EDO58317.1| hypothetical protein CLOL250_01042 [Clostridium sp. L2-50]
          Length = 601

 Score =  615 bits (1585), Expect = e-174,   Method: Composition-based stats.
 Identities = 230/592 (38%), Positives = 341/592 (57%), Gaps = 11/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFE 60
            R+H C ++  +  G  V + GWV + R  GGIIF+D+RD  GI Q++         CFE
Sbjct: 9   KRSHRCAEVSNALEGQKVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEESKCGSECFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  ++SE+V  I+G V  R A  +N N+ TG IE+ A  + ILS AE  P P+    + 
Sbjct: 69  KATKLKSEYVAAIEGTVCKR-AGAVNENLTTGDIEVVATSLRILSEAETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  L +N+V +++++   R  M  E F+E  TP+L  S+PEGARD+
Sbjct: 128 KEELRLKYRYLDLRRPDLQRNLVMKSKVMTIARQFMANEGFLEIETPMLCKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQ+PQ YKQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRIHPGTFYALPQSPQIYKQLLMCSGYDRYFQIARCFRDEDLRADRQP-EFTQMDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E +L  +F+E  + + V     R+ + +A+ R+G+DKPDLR  + + 
Sbjct: 247 LSFVDVDDVIDVNERLLAKLFKEILDVD-VQLPIRRMTWIEAMNRFGSDKPDLRFGMELK 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++      F VF+  L             +G    R   D + E+A++ G  GLAYI 
Sbjct: 306 DISDVVKGCGFGVFTGALENGGSVRGINAKGQG-AMPRKKIDALVEFAKTYGAKGLAYIV 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D           AK +       I   L  + GD   F A             R H+
Sbjct: 365 INEDG----TYKSSFAKFMTEDEMNNIVAALSGEPGDLLLFAADKNKVVWDTLGALRCHL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++G+++ N FEF WI +FP  EW++E+ +    H+PFTMP     ++   D   ++A 
Sbjct: 421 AEQMGLLDKNVFEFVWITEFPLLEWSDEQNRFTAMHHPFTMPMEEDLAIIDTDPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H  ++  + F  +G ++E    RFG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIHQDDIQEKMFECLGFTREQAYERFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VML+    ++R+V  FP  ++   L+  +P  V  +QL+ELG+ I 
Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASCLMTNAPDYVDEDQLKELGIDIT 592


>gi|270160207|ref|ZP_06188863.1| aspartyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289165023|ref|YP_003455161.1| Aspartyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269988546|gb|EEZ94801.1| aspartyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288858196|emb|CBJ12064.1| Aspartyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 593

 Score =  615 bits (1585), Expect = e-174,   Method: Composition-based stats.
 Identities = 229/590 (38%), Positives = 338/590 (57%), Gaps = 4/590 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH C ++    +G  V + GWVH  R HGG+IFLDIRD  G+ QVV  P++   F  A+
Sbjct: 2   RTHHCLEVNELSLGKEVIVCGWVHNRRDHGGVIFLDIRDSSGLLQVVYEPENVKAFSDAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+V+ + G+V  R A  IN  + TG++E+    +EIL+ +   P      +   E 
Sbjct: 62  KLRSEFVVRVTGVVRQRPAGMINETMATGKVEVVGTLLEILNQSPTPPFLPDDFQIVNED 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R+KYR++DLRR  +   +  R ++ + +R  +  +NF++  TP+LT ++PEGARD+LVP
Sbjct: 122 LRYKYRYIDLRRPAMKHKLTVRHQLNSCIRTYLNEQNFLDIETPMLTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF QLD+EM+F
Sbjct: 182 SRVHPGQFYALPQSPQLFKQLLMISGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++++ ILN +E +L+ VF++  N +       R+ Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 241 IDEECILNLIEGLLKTVFKQILNVDLPEKL-KRMSYAEAMRRFGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +    S+F+VFS   +      V      G   +R   D    +    G  GLAYI    
Sbjct: 300 DLVKESDFKVFSVAANDIDSRVVALRLPGGCDLSRKDLDDYGRFVSIYGAKGLAYIKVNN 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K L+     AI  R + + GD  FF A             R  +  +
Sbjct: 360 LAEGMTGLQSPILKFLSEDAINAILHRTEAKTGDVIFFGADKSHIVNESMGALRIKLGHD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++  + +E  WI+D+P +E + E KK+   H+PFT P+    +    +     A  YD
Sbjct: 420 KNLLKAS-WELLWIIDWPMFELDYESKKLSPMHHPFTSPKNLDPNNLRTNPTHTLAKAYD 478

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+EI  G IR H SE+    F  +GI+++  + +FG L  A Q G PPHGGIA GI
Sbjct: 479 IVINGYEIGGGSIRIHQSELQKAVFELLGINEQEAQEKFGFLLDALQYGAPPHGGIALGI 538

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           DR+ MLL  + ++R+V  FP +Q     L  +PS     QL ELG+R+  
Sbjct: 539 DRLAMLLTDSTSIRDVIAFPKTQTASCPLTSAPSPTGSAQLTELGIRLAP 588


>gi|241667494|ref|ZP_04755072.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876040|ref|ZP_05248750.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842061|gb|EET20475.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 589

 Score =  615 bits (1585), Expect = e-174,   Method: Composition-based stats.
 Identities = 214/593 (36%), Positives = 329/593 (55%), Gaps = 6/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+        V + GWVHR R HGG+IFLDIRD  G+ Q+V NP+S  F++A S
Sbjct: 2   RTHYSSDVNEKLQNQKVTICGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPESKAFKVADS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R E+V+   G V  R     N N+ +G++E+  + +EI++ ++ +P  +   +   E +
Sbjct: 62  LRGEYVIKATGTVNLRPEGQENKNLASGKVEIIGEDLEIVNKSKTIPFQLDDFQSTGEDV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 122 KLKYRYIDLRRPEMQNKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+Q+  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQVVKCFRDEDLRADRQP-EFTQIDIEASFI 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+           F  + Y +A+ +YG+DKPDLR P+   N+ E
Sbjct: 241 DEAFIMSTMEKMIAGLFDATIGVKF-DTPFQVMTYAEAMDKYGSDKPDLRIPLEFVNIKE 299

Query: 305 HFVHSEFRVFSKILSVNP-GYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
              + EF+VFS   +          +P      +R   D   ++    G  GLAYI    
Sbjct: 300 DMKNEEFKVFSGPANDPEARVVAMRVPGGNDKLSRKKIDEYTKFVGIYGARGLAYIKINS 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K+++      +  +   Q GD  FF A             R  I ++
Sbjct: 360 LSEGKEGLQSPIVKNISEETLFKVIEKTGAQVGDVLFFGAAKAKIVNDSMGALRAKIGED 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             I   + +   W++DFP +E ++   ++   H+PFT P+         D  ++ +  YD
Sbjct: 420 FEIFTKD-WAPLWVVDFPMFEKDD--NRLYAVHHPFTAPKVETVEELTKDPENLLSRAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G IR H  ++  + F+ +GIS E    +FG +  A   G P HGGIA G+
Sbjct: 477 MVINGYEVGGGSIRIHRQDMQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAFGV 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR++MLL    N+R+V  FP +Q    L+  +PS VS+EQL ELG+ + +  K
Sbjct: 537 DRLIMLLTNTTNIRDVIAFPKTQTASCLMTEAPSNVSLEQLNELGIAVKKEDK 589


>gi|71083425|ref|YP_266144.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|97196785|sp|Q4FMP8|SYD_PELUB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71062538|gb|AAZ21541.1| asparaginyl-tRNA synthetase [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 594

 Score =  615 bits (1585), Expect = e-174,   Method: Composition-based stats.
 Identities = 285/597 (47%), Positives = 406/597 (68%), Gaps = 5/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M++YRTH+C +L +   G  V LSGW+++ R HG ++F+D+RD+YG+TQ + +  +  F 
Sbjct: 1   MNKYRTHTCSELTIDSRGKDVVLSGWINKKRDHGNLLFIDLRDNYGMTQCIIDKSNQNFN 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + ++ E V+ I+G V+ R+ ETIN ++ TG+IE++    E+L   +ELP+PVF ++EY
Sbjct: 61  SLEKIQLESVIKINGKVVERTKETINTDLQTGEIEVNINSFEVLGTCKELPMPVFSDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYRFLDLRR  +H NI+ R+++I+ +R  M    F+E  TPILT+SSPEGARDF
Sbjct: 121 AEEIRLKYRFLDLRRKKIHDNIILRSKVISFIRSEMSKLGFLEFQTPILTSSSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLNPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  VF++FS    +   F RI Y++++ +YG+DKPDLRNP+I+ 
Sbjct: 241 MSFVEQEDVFQVVEKLIVNVFKKFSEKKLMYEKFPRIPYEESMLKYGSDKPDLRNPLIIS 300

Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +++  F+  +  F +F K++                   R+F D +++WA+ QG  GLAY
Sbjct: 301 DLSNIFIRDDVTFEIFKKLVKSGSKVRCIVTKNTKDK-PRSFFDNIDKWAKEQGASGLAY 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                +E  N++  GPV K  +    E I      + GDS FF  G         + AR+
Sbjct: 360 FTIEKEE--NISARGPVGKFFSKEALEEIMKITGAEIGDSIFFACGKINDVEKITSLARD 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA++L +I+ N F FCW++D+P +E NE   KI+F+HNPF+MPQG ++ +  ++ L+IK
Sbjct: 418 KIAKDLKLIDENTFAFCWVVDYPMFEKNEVTNKIEFSHNPFSMPQGDLKDIDFDNPLNIK 477

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH+ E+M + FS  G  KE V+ +F G+  A   G PPHGG
Sbjct: 478 AYQYDIVCNGIELSSGAIRNHVPELMYKLFSIAGYQKEQVDEKFSGMINALSYGAPPHGG 537

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA GIDRIVMLL   KN+REV++FPM+QN  DL+M +PS V+ EQL+ELGL +    
Sbjct: 538 IAPGIDRIVMLLANEKNIREVTMFPMNQNAQDLMMNAPSNVNEEQLKELGLALKLKK 594


>gi|255975492|ref|ZP_05426078.1| aspartyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256619444|ref|ZP_05476290.1| aspartyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256762899|ref|ZP_05503479.1| aspartyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|257079350|ref|ZP_05573711.1| aspartyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257082210|ref|ZP_05576571.1| aspartyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257087175|ref|ZP_05581536.1| aspartyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|294779748|ref|ZP_06745135.1| aspartate--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307268143|ref|ZP_07549530.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307275909|ref|ZP_07557042.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307277692|ref|ZP_07558778.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307287885|ref|ZP_07567918.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|312900883|ref|ZP_07760177.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|255968364|gb|EET98986.1| aspartyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256598971|gb|EEU18147.1| aspartyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256684150|gb|EEU23845.1| aspartyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256987380|gb|EEU74682.1| aspartyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256990240|gb|EEU77542.1| aspartyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256995205|gb|EEU82507.1| aspartyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|294453122|gb|EFG21537.1| aspartate--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|295113235|emb|CBL31872.1| aspartyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|306501030|gb|EFM70337.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306505571|gb|EFM74755.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306507239|gb|EFM76376.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306515533|gb|EFM84061.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|311291982|gb|EFQ70538.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315025975|gb|EFT37907.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315033287|gb|EFT45219.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315143400|gb|EFT87416.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315149219|gb|EFT93235.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315161366|gb|EFU05383.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315163663|gb|EFU07680.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315167505|gb|EFU11522.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|323481106|gb|ADX80545.1| aspartyl-tRNA synthetase [Enterococcus faecalis 62]
 gi|327535485|gb|AEA94319.1| aspartate--tRNA ligase [Enterococcus faecalis OG1RF]
 gi|329568728|gb|EGG50528.1| aspartate--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 589

 Score =  615 bits (1585), Expect = e-174,   Method: Composition-based stats.
 Identities = 226/591 (38%), Positives = 333/591 (56%), Gaps = 10/591 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
            RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+     +EI
Sbjct: 3   KRTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A   RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    
Sbjct: 63  ADKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVN 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+L
Sbjct: 123 DELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F+  ++I    EN+L  V +E       S  F R+ YD+A+ RYG+DKPD R  + + +
Sbjct: 242 TFLTPEEIQTYTENMLAEVMKETKGIEI-SVPFPRMSYDEAMARYGSDKPDTRFAMELID 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V +     +F+VF   L      +           +R   D + ++    G  GLA++  
Sbjct: 301 VADVVKDVDFKVFQAALENGGHVKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWLKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK L    ++ +    + + GD   F A  P    +     R  + 
Sbjct: 361 EED-----GLKGPIAKFLT-EVSDELIAATNAEVGDILMFGADKPEIVAAALGAVRTRLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+    +    D  S+ A  
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAEA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA 
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIAL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 535 GLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|21674146|ref|NP_662211.1| aspartyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|27923861|sp|Q8KCT7|SYD_CHLTE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|21647306|gb|AAM72553.1| aspartyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 603

 Score =  615 bits (1585), Expect = e-174,   Method: Composition-based stats.
 Identities = 291/597 (48%), Positives = 401/597 (67%), Gaps = 8/597 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FE 60
           +R+RTH CG L     G  VR++GWVHR+R HGG+IF+D+RDH GI Q+V  P++   F+
Sbjct: 13  NRFRTHYCGRLNRKSEGELVRIAGWVHRIRDHGGLIFIDLRDHTGICQLVVLPENESQFK 72

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+++ SE V+  +G V+ RS ET+N  + +G IE+    I+I S A+ LP PV  +   
Sbjct: 73  LAETLHSESVISAEGKVVLRSDETVNPRLASGAIEVVVSSIQIESNADPLPFPVADDMPT 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR+ LH+NI+ R+++  ++R  +   +FIE  TPILT+SSPEGARDF
Sbjct: 133 SEELRLKYRFLDLRREKLHENIIFRSKLTAAVRKYLTDLDFIEIQTPILTSSSPEGARDF 192

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GF RYFQIAPCFRDED R+DR PGEFYQ+D+E
Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFPRYFQIAPCFRDEDARADRSPGEFYQIDIE 252

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+EQDD+   +E + + + E  S+       F RI Y D + RYG+DKPDLR P+ + 
Sbjct: 253 MSFIEQDDLFVILEGMFKHLVENMSHKRITQFPFPRISYKDVMNRYGSDKPDLRIPLEIQ 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VTE FV+S F+VF+   +     +   +   G   +R F D+  + AR  G  GLAYI 
Sbjct: 313 DVTELFVNSGFKVFASNTAEGSCVKAMVLKGMGNE-SRLFYDKAEKRARELGSAGLAYIQ 371

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           ++          GPV K L+     A++ RL +  GD  FF AG   K C      RN+ 
Sbjct: 372 FK-----EEGPKGPVVKFLSEAEMNALKERLGIVTGDVVFFGAGKWEKTCKIMGGMRNYF 426

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A +L  ++ +   FCWI+DFP +E+NEE+KKIDF+HNPF+MPQG ME+L+    L I A+
Sbjct: 427 A-DLFPLDKDELSFCWIVDFPMFEYNEEDKKIDFSHNPFSMPQGEMEALESKFPLDILAY 485

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  ++M +AF   G SKE V+ RFG +  AF+ G PPHGGIA
Sbjct: 486 QYDIVCNGIELSSGAIRNHRPDIMYKAFEIAGYSKEEVDARFGHMIEAFKHGAPPHGGIA 545

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VM+L   +N+REV  FPM+Q+  DL+M +PS V+ +QL+EL +RI    ++
Sbjct: 546 PGLDRLVMILRDEQNIREVIAFPMNQSAQDLMMAAPSEVTAQQLKELCIRIELPEEE 602


>gi|167626917|ref|YP_001677417.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189082099|sp|B0TW08|SYD_FRAP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167596918|gb|ABZ86916.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 589

 Score =  615 bits (1585), Expect = e-173,   Method: Composition-based stats.
 Identities = 218/594 (36%), Positives = 334/594 (56%), Gaps = 8/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+        V + GWVHR R HGG+IFLDIRD  G+ Q+V NP+S  F++A S
Sbjct: 2   RTHYSSDVNEKLQNQKVTICGWVHRRRDHGGVIFLDIRDRTGLVQLVFNPESKAFKVADS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R E+V+   G V  R     N N+ +G++E+  + +EI++ ++ +P  +   +   E +
Sbjct: 62  LRGEYVIKATGTVNLRPEGQENKNLASGKVEIIGEDLEIVNKSKTIPFQLDDFQSTGEDV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR++DLRR  +   ++ R++ I  +R  +    F++  TP LT ++PEGARD+LVPS
Sbjct: 122 KLKYRYIDLRRPEMQNKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R   G FYALPQ+PQ +KQLLM SGFDRY+Q+  CFRDED R+DR P EF Q+D+E SF+
Sbjct: 182 RNFNGKFYALPQSPQLFKQLLMVSGFDRYYQVVKCFRDEDLRADRQP-EFTQIDIEASFI 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++  I++TME ++ G+F+           F  + Y +A+ +YG+DKPDLR P+   N+ E
Sbjct: 241 DEAFIMSTMEKMIAGLFDATIGVKF-DTPFQVMTYAEAMDKYGSDKPDLRIPLEFVNIKE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
              + EF+VFS   + +P   V A+   GG    +R   D   ++    G  GLAYI   
Sbjct: 300 DMKNEEFKVFSGP-ANDPEARVVAMRVPGGNDKLSRKKIDEYTKFVGIYGARGLAYIKIN 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G      P+ K+++      +  +   Q GD  FF A             R  I +
Sbjct: 359 SLSEGKEGLQSPIVKNISEETLFKVIEKTGAQVGDVLFFGAAKAKIVNDSMGALRAKIGE 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +  I   + +   W++DFP +E ++   ++   H+PFT P+         D  ++ +  Y
Sbjct: 419 DFEIFTKD-WAPLWVVDFPMFEKDD--NRLYAVHHPFTAPKVDTVEELTKDPENLLSRAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  ++  + F+ +GIS E    +FG +  A   G P HGGIA G
Sbjct: 476 DMVINGYEVGGGSIRIHRQDMQAKVFNLLGISDEEAREKFGFMLDALSYGTPIHGGIAFG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR++MLL    N+R+V  FP +Q    L+  +PS VS+EQL ELG+ + +  K
Sbjct: 536 VDRLIMLLTNTTNIRDVIAFPKTQTASCLMTEAPSNVSLEQLNELGIAVKKEDK 589


>gi|157825326|ref|YP_001493046.1| aspartyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166225382|sp|A8GMB3|SYD_RICAH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157799284|gb|ABV74538.1| aspartyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 602

 Score =  615 bits (1585), Expect = e-173,   Method: Composition-based stats.
 Identities = 303/605 (50%), Positives = 413/605 (68%), Gaps = 10/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           MH+YRTH+C +L +SDVG  V+LSGWVHR R HG ++F+D+RDHYGI Q+V  + +    
Sbjct: 1   MHKYRTHNCSELQISDVGQEVKLSGWVHRRRDHGNLVFIDLRDHYGIIQIVFTDQNPQLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  + S A+ LP  +  E++
Sbjct: 61  EDASRLRYESVVTVRGTVVARSEDTINNTLPTGHVEVLAVEFIVESAADTLPFVINTEKD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M+A  F E  TPILTASSPEGARD
Sbjct: 121 APEDSRLKHRFLDLRREKLHNNIILRSQIISHIRHLMMARGFTEFQTPILTASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDL 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++    +  F+RI Y++++ +YG+DKPDLRN II+
Sbjct: 241 EMSFVTQEDVFSTIEPVMYDLFNKFTDKKVSATPFVRIPYNESMLKYGSDKPDLRNTIII 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTE F  S+F +F + +           P K     R+F D+M E+A S+G  GL YI
Sbjct: 301 SDVTEIFRDSDFTIFRENIRKGSIVRAIPAP-KAATMPRSFFDKMIEFAISEGAGGLGYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +    S      G VAK L+    ++++    + +GD+ FF++    K    A   R  
Sbjct: 360 QF----SETGETKGAVAKFLSTQQLDSLKATASISNGDAVFFVSDKKEKAARLAGKVRIR 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----NDLL 475
           + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+E+L+       LL
Sbjct: 416 LGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGLEALENAKTTEALL 475

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + A+QYD+VCNG E++SG IRNH  ++M +AFS  G S+E V  RFGG+ RAF+ G PP
Sbjct: 476 ELNAYQYDIVCNGIELSSGAIRNHKPDIMYKAFSIAGYSEEEVNKRFGGMIRAFKFGAPP 535

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDRIVMLL  A N+REV  FP++Q   DLLM +PS V  + L+EL + +  + 
Sbjct: 536 HGGIAPGIDRIVMLLAEATNIREVIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPSA 595

Query: 596 KKILK 600
           +K  K
Sbjct: 596 RKNAK 600


>gi|238898055|ref|YP_002923736.1| aspartate tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259511863|sp|C4K4U5|SYD_HAMD5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229465814|gb|ACQ67588.1| aspartate tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 589

 Score =  614 bits (1584), Expect = e-173,   Method: Composition-based stats.
 Identities = 217/594 (36%), Positives = 331/594 (55%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RTH CG+L +S +   V L GWV R R  GG+IF+D+RD  GI QV  +P+    FE A 
Sbjct: 2   RTHCCGELSLSVLNQTVCLCGWVDRRRDLGGLIFIDMRDFSGIVQVFFDPEQQALFEQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+ + I G V +R    IN  ++TG +E+ ++ + I++ +E   LP+   +   E 
Sbjct: 62  SLRNEFCIQITGKVKARPHHQINQKMLTGAVEVFSENLTIINCSEP--LPLDRNQNNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  +   +  R++I + +R  +  E F++  TP LT ++PEGARD+LVP
Sbjct: 120 QRLRYRYLDLRRPEMLARLKTRSKITSFVRQFLDKEGFLDVETPTLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV +G FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVQKGKFYALPQSPQLFKQLLMVSGVDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +    E ++R ++ +  N       F  + +++AIRR+G+DKPDLRNP+ + ++ 
Sbjct: 239 MTAQQVRTVTEKLIRQLWLQIKNI--HLGAFPVMTFEEAIRRFGSDKPDLRNPLELVDLD 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + +F+VFS+  +      V      G   +R   D    +       GLA++  + 
Sbjct: 297 DVLKNVDFKVFSEPANDAHSRVVGIRVPNGADISRKQIDEYTAFVHIYAARGLAWLKIKQ 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G      P+AK L+    E I  R   +DGD  FF A             R  +  +
Sbjct: 357 ADAGLEGIQSPIAKFLSPEILERILKRTQAKDGDLLFFGADKKKIVTDAMGALRLKLGLD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             +   + +   W++DFP +  + E   +   H+PFT P+    S    +  +  A  YD
Sbjct: 417 RQLTQLDRWAPLWVIDFPMFSNDTETG-LTAMHHPFTSPKNTNLSEFAANPETALANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H S++  Q FS +GI     + +FG L  A + G PPH GIA G+
Sbjct: 476 MVINGYEVGGGSVRIHHSDLQQQVFSLIGIEANQQKQQFGFLLEALKYGAPPHAGIAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+VMLL G  N+R+V  FP +     L+  +PS  S   L+EL + +V+  KK
Sbjct: 536 DRLVMLLTGTNNIRDVIAFPKTTAAACLMTDAPSFASDSSLQELFIDVVKKEKK 589


>gi|117924249|ref|YP_864866.1| aspartyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|166225354|sp|A0L667|SYD_MAGSM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|117608005|gb|ABK43460.1| aspartyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 607

 Score =  614 bits (1584), Expect = e-173,   Method: Composition-based stats.
 Identities = 238/609 (39%), Positives = 338/609 (55%), Gaps = 20/609 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
             RTH C D+  S +G  V L GW++R R HGG+IF+D+RD  G+ QVV +P+       
Sbjct: 1   MKRTHYCNDVRESQIGETVVLEGWINRRRDHGGVIFVDLRDRTGLVQVVFSPELFAEPHA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A ++RSE+V+   G V +RS  TIN N+ TG+IE+  + + IL+ +    LP   + E 
Sbjct: 61  QAHTLRSEYVIRATGKVTARSEGTINPNMDTGRIEVVVEDLTILNSSLP--LPFQLDDEI 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E++R +YRFLDLRR  + +N++ R RI+ S+R  +    F+E  TP+LT S+PEGARD+
Sbjct: 119 SENLRLQYRFLDLRRPDMQRNLMFRHRIMQSVRKHLDGSGFVEVETPMLTRSTPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRVN G FYALPQ+PQ +KQLLM +G+DRYFQI  CFRDED R+DR P EF Q+D+E
Sbjct: 179 LVPSRVNPGDFYALPQSPQLFKQLLMMAGYDRYFQIVRCFRDEDLRADRQP-EFTQIDLE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVE +D++   E+V+   F+E     ++     RI Y +A+ +YG D PD+R  + + 
Sbjct: 238 MSFVEPNDVMELTESVVVEAFKEALGV-SIPQPVRRITYAEAMDKYGLDAPDMRITMELK 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIP-----AKGGGGNRAFCDRMNEWARSQGQPG 355
           ++TE    SEF+VF +  ++        +        GG   R   D   E+    G  G
Sbjct: 297 DLTEVMKSSEFKVFRQAATLEGRGNEHGLVKVLKVPGGGSLTRKQIDTYTEFVGIYGAKG 356

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI              P+ K L     +AI+     Q GD  FF A            
Sbjct: 357 LAYIKVN-GPWQEDGWQSPIVKFLGDAEKQAIQEATQAQVGDLLFFGADKASVVNESLGR 415

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--- 472
            R  + +EL ++    F F W+ DFP  +W+ E ++    H+PFT P         N   
Sbjct: 416 LRVKLGKELEMLCDEKFAFVWVTDFPLLDWDNEARRNTAVHHPFTAPHPDDIIYLENADG 475

Query: 473 -----DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                 L  +++  YDLV NG E+  G IR H + +  +    + I +E  E +FG L R
Sbjct: 476 ASVEHPLEKVRSLAYDLVLNGTEVGGGSIRIHDTMLQRRMLELLEIGEEEAEGKFGFLLR 535

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           A Q G PPHGG+A G+DR+V L+LG  ++R+V  FP +Q    L+  +PS V   QL+EL
Sbjct: 536 ALQYGAPPHGGLALGLDRLVTLMLGLDSIRDVIAFPKTQKATCLMTEAPSKVDGAQLKEL 595

Query: 588 GLRIVENPK 596
            LR    PK
Sbjct: 596 HLRSTFKPK 604


>gi|229828383|ref|ZP_04454452.1| hypothetical protein GCWU000342_00444 [Shuttleworthia satelles DSM
           14600]
 gi|229792977|gb|EEP29091.1| hypothetical protein GCWU000342_00444 [Shuttleworthia satelles DSM
           14600]
          Length = 602

 Score =  614 bits (1584), Expect = e-173,   Method: Composition-based stats.
 Identities = 234/601 (38%), Positives = 352/601 (58%), Gaps = 12/601 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           +R+  C +L  +++G  V L GWV + R  G +IF+D+RD  G+ Q++ +     S  F 
Sbjct: 9   HRSCRCAELSEANIGQTVTLMGWVQKRRNLGSLIFVDLRDRSGLMQILFDEKIVGSEGFA 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  VRSE+VL + G V  R A  IN N+ TG IEL+A+ I +LS +E  P P+    + 
Sbjct: 69  RAGGVRSEYVLAVTGRVQKREA-AINENLKTGSIELAAESIRVLSESEVPPFPIEDGIKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + KN++ R+++ N +R  M  + F+E  TP+L  S+PEGARD+
Sbjct: 128 KDELRLKYRYLDLRRPEMQKNLILRSQVTNLIRKYMAEDGFLEIETPMLQKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 188 LVPSRVHPGSFYALPQSPQLFKQLLMVSGFDRYFQIARCFRDEDLRADRQP-EFTQVDLE 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+ +D+L T   +LR VF +            R+ + +A+ R+G+DKPD R  + + 
Sbjct: 247 MSFVDMEDVLETTSRLLRNVFRDAIGVEIPDPI-PRMTWQEAMERFGSDKPDTRFGMELI 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++      F VF+  L+         +  +G  G R   D++ + A++ G  GLAYI 
Sbjct: 306 DVSDVVADCGFSVFTSALASKGTVRGINVRGQGDMG-RKKIDKLVDLAKACGAKGLAYIQ 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R D+          +K ++      +   +D Q GD   F A             R  +
Sbjct: 365 CRSDD----TVKSSFSKFMSEEKMSDLIKAMDAQAGDLLLFTADRFKTAVEVLGQIRLTL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN-DLLSIKA 479
           A+EL +I  + F F W++DFP +EW++E+ +    H+PFTMP         + DL SI++
Sbjct: 421 ARELELIPEDQFNFLWVVDFPAFEWSDEQNRFLAMHHPFTMPYEEDLDKLESGDLSSIRS 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H  ++  + F  +G S E   +RFG L  AF+ G+PPH G+
Sbjct: 481 KAYDIVLNGVELGGGSIRIHQDDIQERMFKALGFSLEEARDRFGFLLTAFEYGVPPHAGL 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           A G+DR++ML+  A ++R+V  FP  ++  DL+  +P  V  +QL EL L+ + + ++ +
Sbjct: 541 AFGLDRMIMLMTSADSIRDVIAFPKVKDASDLMTQAPGPVDDKQLEELYLKTLSDGQEKI 600

Query: 600 K 600
           K
Sbjct: 601 K 601


>gi|91762152|ref|ZP_01264117.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717954|gb|EAS84604.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 594

 Score =  614 bits (1584), Expect = e-173,   Method: Composition-based stats.
 Identities = 285/597 (47%), Positives = 404/597 (67%), Gaps = 5/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M++YRTH+C +L +   G  V LSGW+++ R HG ++F+D+RD+YG+TQ + +  +  F 
Sbjct: 1   MNKYRTHTCSELTIDSSGKDVVLSGWINKKRDHGNLLFIDLRDNYGMTQCIIDKSNENFN 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + ++ E V+ I G V+ R+ ETIN ++ TG+IE++    E+L   +ELP+PVF ++EY
Sbjct: 61  SLEKIQLESVIKIKGKVVERTKETINTDLQTGEIEVNINSFEVLGTCKELPMPVFSDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYRFLDLRR  +H NI+ R+++I+ +R  M    F+E  TPILT+SSPEGARDF
Sbjct: 121 AEEIRLKYRFLDLRRKNIHDNIILRSKVISFIRGEMSKLGFLEFQTPILTSSSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLNPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  VF++FS    +   F RI Y++++ +YG+DKPDLRNP+I+ 
Sbjct: 241 MSFVEQEDVFQVVEKLIVNVFKKFSEKKLMYEKFPRIPYEESMLKYGSDKPDLRNPLIIS 300

Query: 301 NVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +++  F   +  F +F K++                   R+F D +++WA+ QG  GLAY
Sbjct: 301 DLSNIFTRDDVTFEIFKKLVKSGSKVRCIVTKNTKDK-PRSFFDNIDKWAKEQGASGLAY 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                +E  N++  GPV K  +    E I      + GDS FF  G         + AR+
Sbjct: 360 FTIEKEE--NISAKGPVGKFFSKEALEEIMKITGAEIGDSIFFACGKINDVEKITSLARD 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA++L +I+ N F FCW++D+P +E NE   KI+F+HNPF+MPQG ++ +  ++ L+IK
Sbjct: 418 KIAKDLKLIDENTFAFCWVVDYPMFEKNEVTNKIEFSHNPFSMPQGDLKDIDFDNPLNIK 477

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH+ E+M + FS  G  KE V+ +F G+  A   G PPHGG
Sbjct: 478 AYQYDIVCNGIELSSGAIRNHVPELMYKLFSIAGYQKEQVDEKFSGMINALSYGAPPHGG 537

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA GIDRIVMLL   KN+REV++FPM+QN  DL+M +PS V+ EQL+ELGL +    
Sbjct: 538 IAPGIDRIVMLLANEKNIREVTMFPMNQNAQDLMMNAPSNVNEEQLKELGLALKLKK 594


>gi|312967069|ref|ZP_07781287.1| aspartyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312288533|gb|EFR16435.1| aspartyl-tRNA synthetase [Escherichia coli 2362-75]
          Length = 577

 Score =  614 bits (1584), Expect = e-173,   Method: Composition-based stats.
 Identities = 215/580 (37%), Positives = 322/580 (55%), Gaps = 7/580 (1%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGL 76
           G  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G 
Sbjct: 2   GQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGT 61

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR 
Sbjct: 62  VRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRP 119

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ
Sbjct: 120 EMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQ 179

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME +
Sbjct: 180 SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEAL 238

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+ 
Sbjct: 239 VRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAG 296

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
             +   G         G    R   D    + +  G  GLAYI       G      PVA
Sbjct: 297 PANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVA 356

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K LN    EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W
Sbjct: 357 KFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLW 416

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           ++DFP +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +
Sbjct: 417 VIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSV 475

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+
Sbjct: 476 RIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNI 535

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 RDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 575


>gi|283770704|ref|ZP_06343596.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283460851|gb|EFC07941.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 588

 Score =  614 bits (1583), Expect = e-173,   Method: Composition-based stats.
 Identities = 230/592 (38%), Positives = 335/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +I
Sbjct: 3   KRTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E             
Sbjct: 63  AETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDEEGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +L+    +   G  ++  F R+ Y +A+RR+G+DKPD R  + + 
Sbjct: 242 MSFVDQEDVMQMGEEMLKK-VVKEVKGVEINGAFPRMTYKEAMRRFGSDKPDTRFEMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++     +F+VF   +  +   +            R   D + E+    G  GLA++ 
Sbjct: 301 DVSQLGRDMDFKVFKDTVENDGEIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+ +     N E +    D + GD   F+A  P          R  +
Sbjct: 361 VVED-----GLTGPIGRFFETENVETLLTLTDAEAGDLVMFVADKPNVVAQSLGALRVKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A 
Sbjct: 416 AKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRIR 587


>gi|282916898|ref|ZP_06324656.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282319385|gb|EFB49737.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
          Length = 588

 Score =  614 bits (1583), Expect = e-173,   Method: Composition-based stats.
 Identities = 229/592 (38%), Positives = 334/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +I
Sbjct: 3   KRTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E             
Sbjct: 63  AETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDEEGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +L+    +      ++  F R+ Y +A+RR+G+DKPD R  + + 
Sbjct: 242 MSFVDQEDVMQMGEEMLKK-VVKEVKDVEINGAFPRMTYKEAMRRFGSDKPDTRFEMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++     +F+VF   +  +   +            R   D + E+    G  GLA++ 
Sbjct: 301 DVSQLGRDMDFKVFKDTVENDGEIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLAWVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+ +     N E +    D + GD   F+A  P          R  +
Sbjct: 361 VVED-----GLTGPIGRFFETENVETLLTLTDAEAGDLVMFVADKPNVVAQSLGALRVKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A 
Sbjct: 416 AKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRIR 587


>gi|218282369|ref|ZP_03488651.1| hypothetical protein EUBIFOR_01233 [Eubacterium biforme DSM 3989]
 gi|218216655|gb|EEC90193.1| hypothetical protein EUBIFOR_01233 [Eubacterium biforme DSM 3989]
          Length = 578

 Score =  614 bits (1583), Expect = e-173,   Method: Composition-based stats.
 Identities = 231/590 (39%), Positives = 344/590 (58%), Gaps = 12/590 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YRTH+ G+L + DV S V L GWV + R  G ++F+D+RD YGITQ+V N D A     
Sbjct: 1   MYRTHNNGELRLQDVNSEVTLCGWVSKRRNFGALVFIDLRDRYGITQLVFNEDIAA--QI 58

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR+E+VL + G V+ R  +  N  + TG+IE+   +++I++ A   P+ +  E +  E
Sbjct: 59  SDVRNEYVLQVKGTVVERKDK--NPKLETGEIEVVVSEVKIVNTAITTPMIIADETDALE 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  L KN++ R RI   +R  +    F E  TPIL  S+PEGARD+LV
Sbjct: 117 DTRLKYRYLDLRRPVLQKNLILRNRITLLVRNYLAKYGFTEVETPILCRSTPEGARDYLV 176

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++G FYALPQ+PQ YKQLLM  G DRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 177 PSRISKGEFYALPQSPQLYKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFSQIDIEMS 235

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++DI +  E +++ +F++          F RI YD  + +YG+DKPDLR  + ++NV
Sbjct: 236 FVDEEDIWSMTEGLMKEIFKDIKGIELPE--FKRIPYDTCMEKYGSDKPDLRFDMPLYNV 293

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E F ++EF+VF   L+     +   +       +R   D++ ++ +  G   LA +   
Sbjct: 294 SEVFANTEFKVFENCLNEGGIIQAMNVKNGADKFSRKQLDKLQDYVKVYGAKALANLKLT 353

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                +    G V K L+    EA+R  L++++ D  FF+A       +     R  +  
Sbjct: 354 -----SEGFAGSVTKVLSDAEKEALRTMLNIEENDIVFFVADKKKVAQTSLGALRVKLGH 408

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +IN + +EF W+ DFP +E++E E +   AH+PFT P         +D     +  Y
Sbjct: 409 DLDLINKDAYEFLWVTDFPMFEYDENENRYVAAHHPFTSPNLEDVDKLMSDPAHCYSRAY 468

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+ SG IR H  ++  + F  +G++ E    +F     AFQ G PPHGG+  G
Sbjct: 469 DLVLNGYELLSGSIRIHDQKLQEKVFEAIGMTLEEAHEKFSWFMDAFQYGTPPHGGVGIG 528

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           ++R+ M+L G  N+R+V  FP + +  DL+  +PS V   QL+ELG+   
Sbjct: 529 LERLTMILAGTDNIRDVVAFPKTASASDLMAQAPSPVDPTQLKELGIETK 578


>gi|328952295|ref|YP_004369629.1| aspartyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328452619|gb|AEB08448.1| aspartyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 593

 Score =  614 bits (1583), Expect = e-173,   Method: Composition-based stats.
 Identities = 236/591 (39%), Positives = 341/591 (57%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTHSCG L + D+   V L GWV R R HGG+IF+D+RD  G+TQVV NP+        A
Sbjct: 10  RTHSCGGLRLDDLNKEVILMGWVQRRRDHGGLIFVDLRDREGLTQVVFNPEVNDLAHAKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
             +RSE+V+ I G+V++R     N ++ TG+IE++A ++ +L+ +   P  +   + +  
Sbjct: 70  DILRSEFVIAIRGVVIARPEGMANPSLPTGEIEVAASELRLLNTSLTPPYELEDFKLDTS 129

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR +YR+LDLRR  L +N+  R R    +R  +  + FIE  TP+LT S+PEGARD+L
Sbjct: 130 EAIRLRYRYLDLRRPGLMRNLRLRHRAAQVVRNYLNQQGFIEVETPVLTRSTPEGARDYL 189

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR N G F+ALPQ+PQ +KQLLM +G +RY+Q+  CFRDED R+DR P EF Q+DMEM
Sbjct: 190 VPSRTNPGRFFALPQSPQLFKQLLMMAGLERYYQLCRCFRDEDLRADRQP-EFTQIDMEM 248

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ ++DI + +E ++  +F+E      V+  F R+ Y + I R+G D+PD R  + +  
Sbjct: 249 SFISEEDIYDVVEGMMAILFKEILGRE-VTLPFPRLTYAECISRFGVDRPDRRFGLELVE 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360
           VT+    S+FR F+ + +     +  AI  KG     R   D +  +    G  GLA+I 
Sbjct: 308 VTDLVAGSDFRTFADVAARGGVVK--AINGKGLARLPRKELDELTGFVGIYGAKGLAWIK 365

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                        P+ K        AI  RL  + GD   F+A  P    +     R H+
Sbjct: 366 LT-----PTGWQSPLTKFFTPEQQAAINDRLQARQGDLLMFVADIPQIVHTALGQLRLHL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++  +I    ++FCW+  FP  E++ EEK+    H+PFT P      L   D  +++A 
Sbjct: 421 GKKEHLILPETYDFCWVTHFPLLEYDAEEKRYVAMHHPFTSPLEQDLPLLQTDPGAVRAR 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H  +V  + F  + IS E  + +FG L  A + G PPHGG+A
Sbjct: 481 AYDLVLNGNEVGGGSIRIHQRQVQEKVFDTLKISPEEAQQKFGFLLEALEYGAPPHGGVA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G DR+VM+L GAK++REV  FP +Q    LL  +PS V V QL ELG+R+
Sbjct: 541 FGFDRLVMILAGAKSIREVIAFPKTQKATCLLTQAPSEVDVAQLLELGIRL 591


>gi|167855752|ref|ZP_02478507.1| aspartyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853149|gb|EDS24408.1| aspartyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 589

 Score =  614 bits (1583), Expect = e-173,   Method: Composition-based stats.
 Identities = 214/593 (36%), Positives = 333/593 (56%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  + VG  V LSGWVHRVR  G  IF+ IRD  GI QV  +  D A F+ A 
Sbjct: 2   RSHYCGVLNRTHVGEQVTLSGWVHRVRNLGRFIFMQIRDREGIVQVFFDEKDEALFKQAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E  + I G V++R    IN  + TG+IE+  +++ + + ++   LP+   +   E 
Sbjct: 62  ALRAEACVQIKGEVIARDTSQINKEMATGEIEVLVKELVVYNNSD--VLPLDFNQNNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMAERLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E +F
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETTF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++RG++ +  N +     F ++ + +A+RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPEVRAMMEKMIRGLWLDRLNVDLGE--FPQMTFAEAMRRYGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   ++  + G  GLA+     
Sbjct: 297 DILKDVEFKVFSGPANDPEGRVAVIRVPNGAEITRKQIDEYTQFVGNYGAKGLAWAKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L     +A+  R++ Q+GD  FF A             R  + ++
Sbjct: 357 VNAGLEGLQSPIAKFLTDDVVKALLARVNAQNGDIIFFGADSEKVVTDAMGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ +   ++  W++DFP +E + +E      H+PFT P+         +     A  YD
Sbjct: 417 LGLTDLTAWKPLWVVDFPMFEKD-DEGNWSAMHHPFTAPKDLSPEELVQNPKGAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI++E  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIFDPKMQQTVFGILGINEEEQKEKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L EL ++     +
Sbjct: 536 DRLTMLITGTENIRDVIAFPKTTAAACLMTDAPSFGNPKALAELAIQTTLEKE 588


>gi|282919404|ref|ZP_06327139.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282317214|gb|EFB47588.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
          Length = 588

 Score =  614 bits (1583), Expect = e-173,   Method: Composition-based stats.
 Identities = 230/592 (38%), Positives = 333/592 (56%), Gaps = 10/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +  + +G  + L GWV+  R  GG+IF+D+RD  GI QVV NP       +I
Sbjct: 3   KRTTYCGLVTEAFLGQEITLKGWVNNRRDLGGLIFVDLRDREGIVQVVFNPAFSEEALKI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A++VRSE+V+ + G V  R  ET+N  I TGQ+E+    I++++ +E             
Sbjct: 63  AETVRSEYVVEVQGTVTKRDPETVNPKIKTGQVEVQVTNIKVINKSETPPFSINEENVNV 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR  L +    R +I  S+R  +  E F +  TP+LT S+PEGARD+
Sbjct: 123 DENIRLKYRYLDLRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDY 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF Q+D+E
Sbjct: 183 LVPSRVHDGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQP-EFTQVDIE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   E +L+    +   G  ++  F R+ Y +A+RRYG+DKPD R  + + 
Sbjct: 242 MSFVDQEDVMQMGEEMLKK-VVKEVKGVEINGAFPRMTYKEAMRRYGSDKPDTRFEMELI 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++     +F+VF   +  +   +            R   D + E+    G  GLA + 
Sbjct: 301 DVSQLGRDMDFKVFKDTVENDGEIKAIVAKGAAEQYTRKDMDALTEFVNIYGAKGLARVK 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+ +     N E +      + GD   F+A  P          R  +
Sbjct: 361 VVED-----GLTGPIGRFFEAENVETLLTLTGAEAGDLVMFVADKPNVVAQSLGALRVKL 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ELG+I+     F W+ D+P  E++E+ K+   AH+PFT P+    +  G      +A 
Sbjct: 416 AKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAPEEAEAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  E+  + F  +G +KE  + +FG L  AF+ G PPHGGIA
Sbjct: 476 AYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL    N+R+   FP + +   LL  +P  VS +QL EL LRI 
Sbjct: 536 LGLDRLVMLLTNRTNLRDTIAFPKTASATCLLTNAPGEVSDKQLEELSLRIR 587


>gi|323186874|gb|EFZ72193.1| aspartyl-tRNA synthetase [Escherichia coli RN587/1]
          Length = 577

 Score =  613 bits (1582), Expect = e-173,   Method: Composition-based stats.
 Identities = 215/580 (37%), Positives = 321/580 (55%), Gaps = 7/580 (1%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGL 76
           G  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G 
Sbjct: 2   GQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGT 61

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR 
Sbjct: 62  VRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRP 119

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ
Sbjct: 120 EMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQ 179

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME +
Sbjct: 180 SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEAL 238

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +R ++ E         +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+ 
Sbjct: 239 VRHLWLEVKGVE--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAG 296

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
             +   G         G    R   D    + +  G  GLAYI       G      PVA
Sbjct: 297 PANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVA 356

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K LN    EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W
Sbjct: 357 KFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLW 416

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           ++DFP +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +
Sbjct: 417 VIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSV 475

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+
Sbjct: 476 RIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNI 535

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 RDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 575


>gi|320188567|gb|EFW63229.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|326342246|gb|EGD66027.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
          Length = 577

 Score =  613 bits (1582), Expect = e-173,   Method: Composition-based stats.
 Identities = 215/580 (37%), Positives = 322/580 (55%), Gaps = 7/580 (1%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGL 76
           G  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G 
Sbjct: 2   GQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGT 61

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR 
Sbjct: 62  VRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRP 119

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ
Sbjct: 120 EMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQ 179

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME +
Sbjct: 180 SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEAL 238

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+ 
Sbjct: 239 VRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLRSVEFAVFAG 296

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
             +   G         G    R   D    + +  G  GLAYI       G      PVA
Sbjct: 297 PANDPKGRVAALCVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVA 356

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K LN    EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W
Sbjct: 357 KFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLW 416

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           ++DFP +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +
Sbjct: 417 VIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSV 475

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+
Sbjct: 476 RIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNI 535

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 RDVIAFPKTTAAACLMTEAPSFANPAALAELSIQVVKKAE 575


>gi|291527507|emb|CBK93093.1| aspartyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 598

 Score =  613 bits (1582), Expect = e-173,   Method: Composition-based stats.
 Identities = 229/597 (38%), Positives = 345/597 (57%), Gaps = 11/597 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60
           +R+H C ++  +++G  V + GWV + R  G +IF+D+RD  GI Q+V    N  +  FE
Sbjct: 9   HRSHRCTEVSNANIGEKVTVMGWVQKRRNLGSLIFVDLRDRSGILQIVFGEENVGAEGFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A ++RSE+V+ ++G V  R+A  +N N+ TG IE+ A  I +LS A+  P  +    + 
Sbjct: 69  KAGTLRSEFVIAVEGTVQKRTA-AVNENLKTGDIEVIATSIRVLSEAQTPPFQIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LDLRR  + +N++ R+ ++  MR  M  E F+E  TPIL  S+PEGARD+
Sbjct: 128 SEDIRLKYRYLDLRRPDIQRNLMLRSNVLRVMRDFMANEGFLEIETPILCKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQ+PQ +KQLLMASG+DRYFQIA CFRDED R+DR P EF Q DME
Sbjct: 188 LVPSRIHHGHFYALPQSPQLFKQLLMASGYDRYFQIARCFRDEDLRADRQP-EFTQADME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD++   E +L+ +F+E  N + V   F R+ + +A+ R+G+DKPD R  + + 
Sbjct: 247 LSFVDIDDVIEVNERLLKHLFKEVINVD-VEIPFKRMPWQEAMDRFGSDKPDTRFGMELC 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E      F VF+  L          +  +     R   D++ E A+  G  GLAY+ 
Sbjct: 306 DVSEVVKDCGFGVFTGALENGGSVRGINVEGQ-AKMPRKKIDKLVEHAKGCGAKGLAYLC 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D           AK +     +A+  +++ + GD   F A       +     R  +
Sbjct: 365 INEDG----TYKSSFAKFMTEAELDALVAKMNGKPGDLLLFAADKNKIVWNVLGALRLML 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             ELG+I+ N + F W+ +FP  EW++EE +    H+PFTMP         +D  +++A 
Sbjct: 421 GAELGLIDENKYNFLWVTEFPLLEWSDEENRFMAMHHPFTMPMEEDWDKIDSDPGAVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H  ++  + F  +G +KE    +FG L  AF  G+PPH G+A
Sbjct: 481 AYDIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKERAHEQFGFLLDAFSYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRI M +L   N++EV  FP  ++  DL+  +P TV  +QL ELG+ +     +
Sbjct: 541 FGVDRICMHMLHTDNIKEVIAFPKVKDASDLMSEAPGTVDPKQLEELGIAVAAEEDE 597


>gi|209695353|ref|YP_002263282.1| aspartyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|238064703|sp|B6EGJ1|SYD_ALISL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|208009305|emb|CAQ79571.1| aspartyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 591

 Score =  613 bits (1582), Expect = e-173,   Method: Composition-based stats.
 Identities = 214/594 (36%), Positives = 325/594 (54%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG+L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD    F  A 
Sbjct: 2   RSHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMKDIFSTAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ +   G V  R    +N ++ TG++EL A  +EI++ +E   LP+   +   E 
Sbjct: 62  QLRNEFCIKFTGEVRVRPDSQVNKDMSTGEVELYATGLEIINRSE--ALPLDFNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR++DLRR  +   I  R R  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVRRFLDENLFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + + +  E ++  +++E  +       F  + + +AIRR+G+DKPDLRNP+ + ++ 
Sbjct: 239 LSSNQVRDITERLVHDMWKELLDVE--LGQFPIMKFSEAIRRFGSDKPDLRNPLELVDIA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF+   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DLLKDVEFQVFAGPANDEKGRVAVIRVPGGASLSRKQIDEYGKFVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN      I  R + + GD   F A             R  +  +
Sbjct: 357 RAAGLEGVQSPVAKFLNADVVNGILERTEAESGDIILFGADKANIVSEAMGALRIKLGDD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + +   +   W++DFP +E +  E  +   H+PFT P G        +  +  +  YD
Sbjct: 417 LELTDKKAWAPLWVIDFPMFEED-GEGNLHAMHHPFTSPLGMTAEELKVNPAAANSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHNAEMQTAVFGILGIEAKEQQEKFGFLLEALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+ MLL G +N+R+V  FP +     LL  +PS  + + L EL + +    KK
Sbjct: 536 DRLAMLLCGTENIRDVIAFPKTTAAACLLTNAPSPANPDSLAELAIAVKFAEKK 589


>gi|315169379|gb|EFU13396.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1342]
          Length = 589

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 226/591 (38%), Positives = 332/591 (56%), Gaps = 10/591 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
            RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+     +EI
Sbjct: 3   KRTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A   RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    
Sbjct: 63  ADKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVN 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+L
Sbjct: 123 DELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F+  ++I    EN+L  V +E       S  F R+ YD+A+ RYG+DKPD R  + + +
Sbjct: 242 TFLTPEEIQTYTENMLAEVMKETKGIEI-SVPFPRMSYDEAMARYGSDKPDTRFAMELID 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V +     +F+VF   L      +           +R   D + ++    G  GLA++  
Sbjct: 301 VADVVKDVDFKVFQAALENGGHVKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWLKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK L    ++ +    + + GD   F A  P    +     R  + 
Sbjct: 361 EED-----GLKGPIAKFLT-EVSDELIAATNAEVGDILMFGADKPEIVAAALGAVRTRLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +ELG+I  + F F WI+D+P +E++EE  +   AH+PFT P+    +    D  S+ A  
Sbjct: 415 KELGLIEESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAEA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA 
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIAL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 535 GLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|261855094|ref|YP_003262377.1| aspartyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261835563|gb|ACX95330.1| aspartyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 596

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 224/591 (37%), Positives = 340/591 (57%), Gaps = 5/591 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H+ G + ++ +   V L GWV+R R HGG+IF+D+RD  G+ Q+V +PD    F  A+
Sbjct: 4   RSHTAGQVDLAVLDQEVTLVGWVNRRRDHGGVIFVDLRDRDGMVQIVFDPDDLDVFAKAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+RSE+V+ + G V  R A T N NI++GQIE+    +EIL+ +E LP  +  ER   E 
Sbjct: 64  SLRSEFVIRVRGKVRRRPAGTENPNIVSGQIEVLGLGLEILNRSEPLPFQLDDER-VSEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  +   +  R ++  ++R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 123 HRLRYRYLDLRRPEMLARLKLRHQVTRALREHLDNAGFMDVETPVLTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM +G +RY+QI  CFRDED R+DR P EF QLD+E SF
Sbjct: 183 SRTHPGEFFALPQSPQIFKQLLMVAGIERYYQIVKCFRDEDLRADRQP-EFTQLDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++++++  +E+++R +F +      + N   R+ + +A+RR+G+DKPDLR P+ + +V 
Sbjct: 242 LDEEEVMALIEDMMRHLFAQTIEL-ALPNPLPRLTWAEAMRRFGSDKPDLRIPLELVDVG 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +  V  +F+VFS   +   G         G    R+  D   ++    G  GLAYI    
Sbjct: 301 DLLVAVDFKVFSGPANDPRGRIAALRVPNGNSLPRSAIDDYTKFVSIYGAKGLAYIKVND 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K L     + I  R   Q GD  FF A             R  I Q+
Sbjct: 361 AAAGREGLQSPILKFLTDDAIDGIMTRTGAQTGDVVFFGADKAKIVNESLGALRVRIGQD 420

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           +G++    F   W+ +FP +E++E+E +    H+PFT P      L   D  ++++  YD
Sbjct: 421 MGLV-EQGFRALWVTEFPMFEYDEKEGRYYALHHPFTAPNLDDLHLLETDPEAVRSRAYD 479

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
            V NGFE+  G +R H   +  + F  +GIS E    +FG L  A + G PP  G+A G+
Sbjct: 480 FVLNGFELGGGSVRIHDQTMQKRVFELLGISAEQASEKFGFLLDALKFGAPPMAGLAFGV 539

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DRIVML+ GA ++REV  FP +Q+   LL  +P  V   QLREL +R+ + 
Sbjct: 540 DRIVMLMSGATSIREVIAFPKTQSAACLLTNAPGEVDEAQLRELSIRVRKP 590


>gi|254390363|ref|ZP_05005580.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294813842|ref|ZP_06772485.1| Aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326442260|ref|ZP_08216994.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197704067|gb|EDY49879.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294326441|gb|EFG08084.1| Aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 593

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 290/595 (48%), Positives = 396/595 (66%), Gaps = 10/595 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDV + VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +A  E
Sbjct: 1   MHRYRSHTCGELRASDVSTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAANE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E V+ +DG V+ R A+ +N  + TG+IE+    IE+L  A+++P  +  +   
Sbjct: 61  ALSHLTKETVVRVDGTVVGRGADNVNPELPTGEIEIEVTGIEVLGAAQQIPFTINADDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+++R +M A  F E +TPIL A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILAATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF  G  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPVEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRARLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F  S F+ F+        +             R F D++ E+A  QG  GLA++ 
Sbjct: 301 DITDVFEGSAFKAFA------GKHVRALPVPDVSAQPRKFFDQLGEYAVEQGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G ++  GP+AK L   N + +  RL +  G + FF AG+  +        R   
Sbjct: 354 -RVAEDGTLS--GPIAKFLTEENVKVLTERLGLAAGHAVFFGAGEAAEVSKIMGAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G      F FCWI+DFP YE +EE  KIDF+HNPF+MPQGGM+ L+  D L I A+
Sbjct: 411 AKRSGHFEEGVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMKDLEEKDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  E+ML+AF   G  +E VE  F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGIELSSGAIRNHEPEIMLKAFEIAGYERETVEREFAGMLRAFRLGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+DRIVMLL    N+RE   FP++ N  DL+MG+PS +   +LREL + + + P
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPSVLEESRLRELNIALRKPP 585


>gi|84388516|ref|ZP_00991063.1| aspartyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84377065|gb|EAP93936.1| aspartyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 590

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 218/594 (36%), Positives = 323/594 (54%), Gaps = 7/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG+L  S  G  V L GWV+R R  GG+IF+D+RD  G+ QVV +PD    F IA 
Sbjct: 2   RTHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMKDIFPIAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ +   G V  R    +N ++ TG++EL A  +EI++ +E   LP+   +   E 
Sbjct: 62  QLRNEFCIKFTGEVRVRPDSQVNKDMATGEVELYATGLEIINRSE--ALPLDFNQTNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR++DLRR  +   I  R R  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYIDLRRPEMSDRIKLRARASSFVRRFLDENLFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++ N  E ++  +++E  +       F  + + +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MSSQEVRNITEKLVHDMWKELLDVE--LGQFPVMPFSEAIRRFGSDKPDLRNPLELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G    R   D   E     G  GLA++    
Sbjct: 297 DLVKDVEFKVFSGPANDEKGRVAVIRVPGGAKLTRKQIDGYAEHVGIYGAKGLAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN      +  R   + GD   F A             R  +  +
Sbjct: 357 RAAGMEGIQSPVAKFLNEDVINGLLERTQAESGDIILFGADKANIVAEAMGALRIKLGDD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + +   +   W++DFP +E +  E  +   H+PFT P G       ++  +  +  YD
Sbjct: 417 LELTDKKAWAPLWVIDFPMFEED-GEGNLHAMHHPFTSPLGVNAEELKSNPAAANSDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI  +  + +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIHSAEMQTAVFGILGIEAKEQQEKFGFLLEALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+ MLL G +N+R+V  FP +     LL  +PS  +   L EL + +    K+
Sbjct: 536 DRLAMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPASLEELAIAVNLAKKE 589


>gi|164687516|ref|ZP_02211544.1| hypothetical protein CLOBAR_01157 [Clostridium bartlettii DSM
           16795]
 gi|164603290|gb|EDQ96755.1| hypothetical protein CLOBAR_01157 [Clostridium bartlettii DSM
           16795]
          Length = 602

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 222/598 (37%), Positives = 342/598 (57%), Gaps = 13/598 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTH CGDL + +VG  V L+GWV + R  GG++F+D+RD  GI+Q++ + D     FE 
Sbjct: 14  KRTHYCGDLRMDNVGEEVILNGWVQKKRNLGGLVFVDLRDIRGISQIIFDADVSKDAFEK 73

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ + SE+V+ + G+V  R A+  N N+ TG IE+SA ++ +LS ++  P+ +  +    
Sbjct: 74  AEKLGSEYVIAVKGIVRERQAK--NPNMATGDIEISATELRVLSKSQTPPIYIKDDDNVS 131

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLR+ ++  N++ R+R+   +R  +   NF+E  TP L   SPEGARD+L
Sbjct: 132 EDKRLKYRYLDLRKPSMQNNLIMRSRVAQIVRQYLSENNFLEIETPFLIKPSPEGARDYL 191

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ +KQ+LM SG DRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 192 VPSRVNPGKFYALPQSPQLFKQILMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 250

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++D++  MEN++  +F+E  N +       R+ Y +A+ R+G+DKPD R  + + +
Sbjct: 251 SFVDENDVMTMMENMIGRIFKEIHNIDI-QLPLKRMTYKEAMDRFGSDKPDTRFAMELTD 309

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-GGNRAFCDRMNEWARSQGQPGLAYIF 360
           +++      F VFS   +             G    ++    ++ E A++    GLA+I 
Sbjct: 310 LSDLVKDCGFGVFSSAANAANSSVRAINAIGGADAFSKKGMKKLEEHAKTYKAKGLAWIK 369

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                        P+AK       +AI  R+D + GD   F+A             R  +
Sbjct: 370 VT-----EEGIDSPIAKFFTEDEIKAILDRMDAKAGDLILFVADKNKVVYDALGQLRLEV 424

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKA 479
           A+++ +I+ N +   W+ +FP +E +EE  ++   H+PFT P       L   D   ++A
Sbjct: 425 ARKMDLIDKNKYNLLWVTEFPLFEEDEETGRMIAMHHPFTCPLDEDIDKLDQEDKTQLRA 484

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R    EV  + F  +G+S+E   ++FG L  AF+ G+PPH G+
Sbjct: 485 KAYDMVLNGYELGGGSVRISDEEVQEKMFKALGMSQETANDKFGYLLEAFKYGVPPHAGL 544

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G DR++MLL GA N+REV  FP +QN    +  +P      QL EL +++    ++
Sbjct: 545 AFGFDRLMMLLTGADNIREVIAFPKNQNAICPMTNAPGLPEEGQLEELSIKVDLEEQE 602


>gi|324989681|gb|EGC21625.1| aspartate--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 584

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 343/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEIVAAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD
Sbjct: 119 VNDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E    + VS  F R+ YDDA+  YG DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGID-VSLPFPRMKYDDAMALYGVDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G +   GPVAK L  + T  +   L +++ D   F+A       +     R  
Sbjct: 353 KV---ADGELT--GPVAKFLTDL-TSQLTEALQLENNDLVLFVADTLEVANAALGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LGKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSPQEATEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++  + K
Sbjct: 527 ALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQVEAHEK 583


>gi|239947034|ref|ZP_04698787.1| aspartyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921310|gb|EER21334.1| aspartyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 605

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 306/605 (50%), Positives = 415/605 (68%), Gaps = 10/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           MH+YRTH+C +L +SDV   V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 1   MHKYRTHNCNELQISDVEKEVKLSGWVHRRRDHGNLLFIDLRDHYGITQIVFTDQNPQLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  I S A+ LP  +  E++
Sbjct: 61  EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFIIESAADTLPFVINTEKD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 121 APEESRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTARGFTEFQTPILTASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+DI +T+E V+  +F +F++       F+RI Y++++ +YG+DKPDLRNPII+
Sbjct: 241 EMSFVTQEDIFSTIEPVMHDLFTKFTDEKVSETPFVRIPYNESMLKYGSDKPDLRNPIII 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTE F +S+F +F + +           P K     R+F D+M E+A S+G  GL YI
Sbjct: 301 ADVTEIFRNSDFTIFRENIKKGSIVRAIPAP-KAASLPRSFFDKMIEFAISEGAGGLGYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +    S      GPVAK L+    E+++    + +GD+ FF +    K    A   R  
Sbjct: 360 QF----SETGEAKGPVAKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRIR 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDLL 475
           + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +LL
Sbjct: 416 LGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEELL 475

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G PP
Sbjct: 476 ELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEKVDKRFGGMIRAFKFGAPP 535

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  + 
Sbjct: 536 HGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPSV 595

Query: 596 KKILK 600
           +K  +
Sbjct: 596 RKNAE 600


>gi|229545447|ref|ZP_04434172.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256853485|ref|ZP_05558855.1| aspartyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|307295914|ref|ZP_07575746.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|229309363|gb|EEN75350.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256711944|gb|EEU26982.1| aspartyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|306496245|gb|EFM65824.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|315028896|gb|EFT40828.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX4000]
          Length = 589

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 226/591 (38%), Positives = 332/591 (56%), Gaps = 10/591 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
            RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+     +EI
Sbjct: 3   KRTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A   RSE V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    
Sbjct: 63  ADKCRSENVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVN 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+L
Sbjct: 123 DELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F+  ++I    EN+L  V +E       S  F R+ YD+A+ RYG+DKPD R  + + +
Sbjct: 242 TFLTPEEIQTYTENMLAEVMKETKGIEI-SVPFPRMSYDEAMARYGSDKPDTRFAMELID 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V +     +F+VF   L      +           +R   D + ++    G  GLA++  
Sbjct: 301 VADVVKDVDFKVFQAALENGGHVKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWLKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK L    ++ +    + + GD   F A  P    +     R  + 
Sbjct: 361 EED-----GLKGPIAKFLT-EVSDELIAATNAEVGDILMFGADKPEIVAAALGAVRTRLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+    +    D  S+ A  
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAEA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA 
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIAL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 535 GLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|89900091|ref|YP_522562.1| aspartyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|123279048|sp|Q21YX2|SYD_RHOFD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|89344828|gb|ABD69031.1| aspartyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 611

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 224/607 (36%), Positives = 338/607 (55%), Gaps = 20/607 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG +  + +G  V L GWV+R R HGG+IF+DIRD  G  QVV +PD    F++A+
Sbjct: 4   RSHYCGLVTDTLLGQTVTLCGWVNRRRDHGGVIFVDIRDREGYVQVVCDPDRADMFKVAE 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + GLV +R   T+N  + +G+IE+   ++ +L+ +   P  +  +    E+
Sbjct: 64  GLRNEFCIQVKGLVRARPEGTVNEGLKSGKIEVLCHELTVLNPSVTPPFQLDDDNLS-ET 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LDLRR  +  N++ R R+   +R  + A  F++  TP+L  S+PEGARD+LVP
Sbjct: 123 TRLTHRVLDLRRPYMQNNLMLRYRVAMEVRKFLDANGFVDIETPMLGKSTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRVHEGHFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + DI +  + ++  VF+   N +     F  + Y +A+ RYG+DKPDLR  +    +T
Sbjct: 242 LSEQDIRDLFQEMITTVFKTTLNVDLGE--FPVMAYSEAMHRYGSDKPDLRVKLEFTELT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKG----GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +     +F+VFS   ++  G  V      G    GG +R   D   E+ +  G  GLAYI
Sbjct: 300 DVMTDVDFKVFSGAATMKGGRVVGLRIPGGAREVGGLSRGEIDAYAEFVKIYGAKGLAYI 359

Query: 360 FWRLDESGNV-------AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
                  G             P+ K+++      +  R   QDGD  FF A         
Sbjct: 360 KVNELAKGPGDKALRWPGLQSPIVKNIHDKAIAEVLARTGAQDGDLIFFGADKAKIVNDA 419

Query: 413 AADARNHIAQ-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
               R  I   E G  N      +   W++DFP +E++EE ++    H+PFT P+ G E 
Sbjct: 420 IGALRIKIGHSEFGKKNALFEKSWRPMWVVDFPMFEFDEEAQRYTAVHHPFTAPKEGHED 479

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
                     +  YD+V NG+E+  G +R H ++V  + F  + IS E  +++FG L  A
Sbjct: 480 WMVTAPEKCISQGYDMVLNGWEMGGGSVRIHRADVQQKVFDALKISPEEAQDKFGFLLDA 539

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
            Q G PPHGG+A G+DRI+ L+ GA+++R+V  FP +Q    LL  +PS V  +QLREL 
Sbjct: 540 LQYGAPPHGGLAFGLDRIITLMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELH 599

Query: 589 LRIVENP 595
           +R+    
Sbjct: 600 IRLRTPE 606


>gi|320547658|ref|ZP_08041943.1| aspartate--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447733|gb|EFW88491.1| aspartate--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 582

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 230/592 (38%), Positives = 342/592 (57%), Gaps = 17/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             RT   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    ++ 
Sbjct: 1   MKRTMYAGRVRSEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSSDVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +R+E+V+ + G V  R  E  N N+ TG++EL    + IL+ A+  P  +  + E
Sbjct: 61  ATAEKLRNEFVIEVTGEVAQR--EQANKNLPTGEVELKVTALTILNTAKTTPFEIKDDVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  +  N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDDNRLRYRYLDLRRPKMLNNFKLRAKVTHSIRNYLDGLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+DM
Sbjct: 179 YLVPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDM 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   DI +  E ++  V ++    + V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSDKDIQDITEGMIAKVMKDTKGID-VTLPFPRMSYDDAMNNYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTELVKDVDFKVFSQA----PVVKAIVVKGNADKYSRKNIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +      + +  GPVAK L  +  + +   L ++D D   F+A       +     R  
Sbjct: 353 KFT-----DGSLNGPVAKFLTTIE-DELTASLQLEDNDLVLFVADTFEVANNTLGALRTR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +++ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IAKELDMVDNSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEESAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E+  + F  +G + E   ++FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQRELQERMFKALGFTAEEANDQFGFLLEAMNYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L I
Sbjct: 527 AIGLDRFVMLLAGEDNIREVIAFPKNNKATDPMTQAPSLVSDKQLDELALAI 578


>gi|51473344|ref|YP_067101.1| aspartyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|62287549|sp|Q68XM3|SYD_RICTY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|51459656|gb|AAU03619.1| Aspartic acid translase [Rickettsia typhi str. Wilmington]
          Length = 605

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 304/605 (50%), Positives = 414/605 (68%), Gaps = 10/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           MH+YRTH+C +L +S+VG  V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 1   MHKYRTHNCNELQLSNVGQEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNQHLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A ++  E V+ + G V++RS  TIN  ++TG IE+ A +  + S +  LP  +  E+E
Sbjct: 61  DYASNLCYESVITVSGTVVARSEGTINNKLLTGHIEVLAVECIVESASSPLPFVINNEKE 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R+++I+ +R  MI   F E  TPILT+SSPEGARD
Sbjct: 121 APEESRLKHRFLDLRREKLHNNIILRSQVISHIRHLMIVRGFTEFQTPILTSSSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRIHPGKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDL 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+DI NT+E VL  +F +F++       F+RI Y++++ +YG+DKPDLRNPII+
Sbjct: 241 EMSFVTQEDIFNTIEPVLYDLFTKFTDKIVSKPPFVRIPYNESMLKYGSDKPDLRNPIII 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTE F  S F +F + +           P K     R+F D+M E+A S+G  GL+YI
Sbjct: 301 SDVTEIFRDSNFTIFRENIKKGSVVRAIHAP-KAASLPRSFFDKMIEFAISEGAIGLSYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +   E+G V   GP++K L     E ++   +  +GD+ FF +    K        R  
Sbjct: 360 QF--SETGEVK--GPLSKFLTKQQLEILKATSNTSNGDAVFFASDQKDKAAKLCGKVRIK 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDLL 475
           + +EL ++  +CF+FCWI DFPFYE+NEE  KIDF+HNPF+MPQGG+++L+      +LL
Sbjct: 416 LGEELNLLEKDCFKFCWITDFPFYEFNEETGKIDFSHNPFSMPQGGIDALEQAKTTEELL 475

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           ++ A+QYD+VCNG E++SG IRNH  E+M +AFS  G S E V+ RFG + RAF+ G PP
Sbjct: 476 ALTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSAEEVDKRFGAMIRAFKFGAPP 535

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM SPS V  + L+EL + +    
Sbjct: 536 HGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNSPSYVDEKALKELSIMLSPTS 595

Query: 596 KKILK 600
           +KI K
Sbjct: 596 RKIHK 600


>gi|326790255|ref|YP_004308076.1| aspartyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326541019|gb|ADZ82878.1| aspartyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 600

 Score =  613 bits (1581), Expect = e-173,   Method: Composition-based stats.
 Identities = 230/603 (38%), Positives = 355/603 (58%), Gaps = 11/603 (1%)

Query: 1   MH-RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSA 57
           MH   RTH C +L  ++VG  V + GWV R R  G I+F+ +RD  G+ Q+  N   +  
Sbjct: 5   MHGLKRTHRCTELSAANVGQEVIVMGWVQRRRNLGQILFITLRDRSGLLQLSFNENTEKE 64

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            FE A+++RSE+V+   G+V+SR A+  N ++ TG IE+  +++ ILS AE  P  +  +
Sbjct: 65  LFEKAETLRSEYVIAARGIVVSRGADA-NKSMQTGDIEIDVKELRILSEAETTPFEILED 123

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +  E +R KYR+LDLRR  + KN++ R+++  S+R  +  E F+E  TPI+  S+PEGA
Sbjct: 124 IDTKEELRLKYRYLDLRRPDMQKNLILRSKVTQSVRRFLETEGFLEIETPIMQKSTPEGA 183

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV+ G+FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+
Sbjct: 184 RDYLVPSRVHPGNFYALPQSPQLFKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQI 242

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DME+SFVE +D++   E +++ VF+E  + + V     ++ Y +A+ R+G+DKPDLR  +
Sbjct: 243 DMELSFVEPEDVMAVNERLIQTVFKEALDVD-VQLPIQKMTYKEAMDRFGSDKPDLRFGV 301

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + ++TE      F VF   ++             G  G R   D + ++ +  G  G+A
Sbjct: 302 ELQDLTEVVKGCGFAVFENAIANGGTVRAINAKGMGDLG-RKQIDALVKYGQDFGAKGVA 360

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +   + D           AK L+     AI+ ++ +   D    +A  P    +     R
Sbjct: 361 WHQIKTDG----EEKSSFAKFLSEKTLAAIKEKMSVDKDDLILIVADKPSVVFAALGALR 416

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ L +IN + F F WI +FP  E++EE  +    H+PFTMP      +   +  ++
Sbjct: 417 LEVARRLDLINQDEFRFVWITEFPLLEYDEEAGRFVAMHHPFTMPMDEDLEMMETNPGAV 476

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDL  NG E+  G IR + ++V  + F+ +G + E  E RFG L  AF+ G+PPHG
Sbjct: 477 RAKAYDLALNGCELGGGSIRIYQNDVQKRMFNLLGFTDEQAEERFGFLLNAFKYGVPPHG 536

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+A G+DR++ML+  A ++R+V  FP  ++   L+  +P  V  +QL EL L IVE  ++
Sbjct: 537 GLAFGLDRMIMLMCKADSIRDVIAFPKVKDASCLMTNAPDVVDQKQLDELALVIVEKQEE 596

Query: 598 ILK 600
           +++
Sbjct: 597 VIE 599


>gi|159026019|emb|CAO86273.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 595

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 242/600 (40%), Positives = 349/600 (58%), Gaps = 17/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           RTH CGDL   ++   V L GWV R R HGG+IF+D+RD  GI Q+V++P      + IA
Sbjct: 2   RTHYCGDLSAIEIEKSVTLFGWVDRRRDHGGVIFIDLRDRSGIVQIVSDPQRTPASYPIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
           ++VR+E+VL + G V  R  E++N  I TG+IE+ A  IEIL+         +       
Sbjct: 62  ETVRNEYVLKVTGTVSQRPPESLNPRIATGEIEIYATSIEILNGVTKQLPFVVSSSESES 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R +YR+LDLRR+ + +N+  R +++  MR  +   ++FIE  TPILT S+PEGAR
Sbjct: 122 VREDVRLRYRYLDLRRERMSQNLQLRHQVVKEMRRFLEDEQHFIEVETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGQWYALPQSPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+   +IL   E ++  +F++  N +  S    R+ Y +A+ RYG D+PD R  + 
Sbjct: 241 MEMSFLSLSEILALNEALIAHIFKKVKNIDI-SLPLPRLTYAEAMDRYGVDRPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + NV E F  S F+VFS  ++     +V  IP      +         + + A   G  G
Sbjct: 300 LVNVAEIFADSGFKVFSGAIASGGTVKVLPIPNGNEAISNVRIKPGGDLFKEATDAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AYI  R+ E  +   +G +  +L     +A+  +   + G    F AGD        + 
Sbjct: 360 IAYI--RVREDYDFDTIGAIKDNLTEAQKQALIEKTGAKPGHLLLFGAGDTDTVNKSLSR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  + ++LG+I+       W+ DFP +E+N EEK+++  H+PFT P          DL 
Sbjct: 418 LRLVLGEQLGLIDPEKINLLWVTDFPMFEYNAEEKRLEALHHPFTAPNPEDLD----DLA 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
             +A  YD++ NG EI  G +R +  EV  + F+ +G+S E   N+FG L  AF+ G PP
Sbjct: 474 HARALAYDMIFNGIEIGGGSLRIYQREVQEKVFATIGLSPEEAYNKFGFLLEAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +PSTV+ +QL+EL +     P
Sbjct: 534 HGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQASCLLTSAPSTVAAKQLKELSVASTYKP 593


>gi|257068573|ref|YP_003154828.1| aspartyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256559391|gb|ACU85238.1| aspartyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 609

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 232/602 (38%), Positives = 338/602 (56%), Gaps = 28/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L    +G  V L+GW+ R R HGG+ FLD+RD  G+TQVV   D      A  
Sbjct: 3   RTHTAGELRPEHIGQTVTLTGWIGRRRDHGGVTFLDLRDASGVTQVVVREDE-----AMH 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL + G V  R     N  + TG IE++A ++E+LS +  LP  +    +  E  
Sbjct: 58  LRNEYVLKVIGSVGRRPEGNENPLLPTGDIEVTASEVEVLSASAPLPFQLDEHTDVGEEA 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR      +  R+ +  + R  ++ ++F+E  TP LT S+PEGARDFLVP+
Sbjct: 118 RLRYRYLDLRRQGPAAAMRLRSEVNRAARDTLLDQDFVEVETPTLTRSTPEGARDFLVPA 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G ++YFQ+A C+RDED R+DR P EF QLD+EMSFV
Sbjct: 178 RLAPGSWYALPQSPQLFKQLLMVGGIEKYFQLARCYRDEDFRADRQP-EFTQLDVEMSFV 236

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +Q+D++   E +L  V+ +   G+ ++  F RI Y +++RR+G+DKPDLR  + +  +T+
Sbjct: 237 DQEDVIALAEEILTAVWAK--GGHQITTPFPRITYAESMRRFGSDKPDLRFDLELVEMTD 294

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    + A G    R   D   EWA+ +G  GLAY+  +  
Sbjct: 295 YFRETPFRVFQAP------YVGAVVMAGGAAQPRRQLDAWQEWAKQRGAKGLAYVLVQ-- 346

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPV+K+++      +        GD  FF AG+     +    AR  IA+ L
Sbjct: 347 EDGTLT--GPVSKNISEAEKSGLLEATGASRGDCIFFAAGEAKSSRALLGAARAEIAERL 404

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
           G+I+ + F F W++D P +E   +                 H+ FT P+         D 
Sbjct: 405 GLIDHDAFAFVWVVDAPMFEPAADAVASGDVAVGGGAWTAVHHAFTSPKPEFMDSFDTDP 464

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A+ YD+VCNG EI  G IR H   V  + F  +GI  E  + +FG L  AFQ G P
Sbjct: 465 GAALAYAYDIVCNGNEIGGGSIRIHDQSVQQRVFQVMGIGAEEAQEKFGFLLDAFQYGAP 524

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRIV LL    ++REV  FP + N  D L  +P+ ++ +Q +E G+     
Sbjct: 525 PHGGIAFGWDRIVALLAREDSIREVIAFPKTGNGYDPLTAAPAPITPQQRKEAGVDTKPA 584

Query: 595 PK 596
           P+
Sbjct: 585 PR 586


>gi|166366468|ref|YP_001658741.1| aspartyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189082104|sp|B0JNW9|SYD_MICAN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166088841|dbj|BAG03549.1| aspartyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 595

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 242/600 (40%), Positives = 349/600 (58%), Gaps = 17/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           RTH CGDL   ++   V L GWV R R HGG+IF+D+RD  GI Q+V++P      + IA
Sbjct: 2   RTHYCGDLSAIEIEKSVTLFGWVDRRRDHGGVIFIDLRDRSGIVQIVSDPQRTPASYPIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
           ++VR+E+VL + G V  R  E++N  I TG+IE+ A  IEIL+         +       
Sbjct: 62  ETVRNEYVLKVTGTVSQRPTESLNPRIATGEIEIYATSIEILNGVTKQLPFVVSSSESES 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R +YR+LDLRR+ + +N+  R +++  MR  +   ++FIE  TPILT S+PEGAR
Sbjct: 122 VREDVRLRYRYLDLRRERMSQNLQLRHQVVKEMRRFLEDEQHFIEVETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGQWYALPQSPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+   +IL   E ++  +F++  N +  S    R+ Y +A+ RYG D+PD R  + 
Sbjct: 241 MEMSFLSLPEILALNEALIAHIFKKVKNIDI-SLPLPRLTYAEAMDRYGIDRPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + NV E F  S F+VFS  ++     +V  IP      +         + + A   G  G
Sbjct: 300 LVNVAEIFADSGFKVFSGAIASGGTVKVLPIPNGNEAISNVRIKPGGDLFKEATDAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AYI  R+ E  +   +G +  +L     +A+  +   + G    F AGD        + 
Sbjct: 360 IAYI--RVREDYDFDTIGAIKDNLTEAQKQALIEKTGAKPGHLLLFGAGDTDTVNKSLSR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  + ++LG+I+       W+ DFP +E+N EEK+++  H+PFT P          DL 
Sbjct: 418 LRLVLGEQLGLIDPEKINLLWVTDFPMFEYNAEEKRLEALHHPFTAPNPEDL----EDLA 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
             +A  YD++ NG EI  G +R +  EV  + F+ +G+S E   N+FG L  AF+ G PP
Sbjct: 474 QARALAYDMIFNGIEIGGGSLRIYQREVQEKVFATIGLSPEEAYNKFGFLLEAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +PSTV+ +QL+EL +     P
Sbjct: 534 HGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQASCLLTSAPSTVAAKQLKELSVASTYKP 593


>gi|110801685|ref|YP_699209.1| aspartyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|123341659|sp|Q0SRP8|SYD_CLOPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110682186|gb|ABG85556.1| aspartate--tRNA ligase [Clostridium perfringens SM101]
          Length = 597

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 339/595 (56%), Gaps = 13/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            R   CGD   S +G  V + GWV R R  GG+ F+D+RD  GI QVV N D      E 
Sbjct: 9   KRNIMCGDARESHIGQKVTVMGWVQRNRNLGGLQFIDLRDREGILQVVFNDDLGEEILEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AKS+R E+ + + G ++ R  E++N N+ TG +EL A++++ILS ++  P+ +  + +  
Sbjct: 69  AKSIRPEYCIAVTGEIVKR--ESVNPNMPTGMVELKAEELKILSESDTPPIYIKEDLDAA 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           ESIR KYR+LDLRR  +      R +   ++R  +    F+E  TPILT S+PEGARD+L
Sbjct: 127 ESIRLKYRYLDLRRPDMQNIFKIRHKTTKAIRDYLDQNGFLEMETPILTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R++R P EF Q+D+EM
Sbjct: 187 VPSRNYPGMFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRANRQP-EFTQVDLEM 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQDD++   E +++ VF+E    + V     R+ + DA+ +YG+DKPDLR  + + N
Sbjct: 246 SFVEQDDVMALNECLIKHVFKEVLGVD-VKTPIKRMTFKDAMEKYGSDKPDLRFGMEITN 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++      F+VF+  ++         +   G    R   DR+ E+ ++    GLA+I  
Sbjct: 305 LSDVVKECGFKVFTDAVANGGSVRGLCL-EGGASMGRKDIDRLGEFVKTFKAKGLAWIQL 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +           P+AK  +      I   +  + GD    +A           + R  ++
Sbjct: 364 K-----EEGVKSPIAKFFSEEELNKIIETMGAKTGDLILIVADKNSVVLKALGELRLELS 418

Query: 422 QELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           ++  ++ + + F F WI +F   E++EEE +   AH+PFTMP          D   ++A 
Sbjct: 419 RKFDLVKDKSEFNFTWITEFDLLEYDEEEGRYFAAHHPFTMPMDEDIKYLDTDPGRVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H +++  + F  +G ++E    RFG L  AF+ G PPHGG+A
Sbjct: 479 AYDLVLNGEELGGGSIRIHDTKLQEKMFEVLGFTQESAWERFGFLLEAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+DR++M L G +N+++V  FP +QN    L  +P+ V  EQL+ELG+  ++  
Sbjct: 539 FGLDRMIMFLAGTENIKDVITFPKNQNAFCYLTEAPNIVDEEQLKELGIETIKKE 593


>gi|322392505|ref|ZP_08065965.1| aspartate--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144497|gb|EFX39898.1| aspartate--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 587

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 236/596 (39%), Positives = 346/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVRAEHIGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEYVIEVTGQVAAR--EQANDKLATGAVELNVTALTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + KN+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLKNLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQLTKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA+I
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVADGELN-----GPVAKFLTGIQ-EDLTAALGLEDKDLVLFVADTLDVANAILGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E+  + F  +G S E    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKELQERMFKALGFSAEEANAQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G  N+REV  FP +    D +  +PSTVS++QL EL L++ ++ 
Sbjct: 527 AIGLDRFVMLLAGEDNIREVIAFPKNNKAIDPMTQAPSTVSLKQLEELNLQVEQDE 582


>gi|262277376|ref|ZP_06055169.1| aspartyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224479|gb|EEY74938.1| aspartyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 595

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 296/595 (49%), Positives = 406/595 (68%), Gaps = 2/595 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M  YRTH+CG+L  S     V LSGW+H+ R HG ++F+D+RD+YGI+Q V       F 
Sbjct: 1   MITYRTHTCGELNKSHKDKNVILSGWIHKKRDHGNLLFIDLRDNYGISQCVIEKGHKSFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             +    E V+ I+GLV+ RS+ETIN ++ TG+IE+S    EIL  A+ELPLPVF + +Y
Sbjct: 61  NIEKTSLETVVKIEGLVLERSSETINKDLKTGEIEISINNFEILGSAKELPLPVFLDEDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LDLRR  +HKNI+ R+ +I+ +R  M    F+E  TPILT+SSPEGARDF
Sbjct: 121 SEDIRLKYRYLDLRRKRIHKNIILRSEVISFIRDEMKKFGFLEFQTPILTSSSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQAPQQ+KQL+M +GFD+YFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLNPGKFYALPQAPQQFKQLIMVAGFDKYFQIAPCFRDEDARADRSPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+ + + +E +L  VFE+FSN   ++  F RI Y+ ++ +YGTDKPDLRNP+++ 
Sbjct: 241 MSFVNQNQVFDILEKLLSSVFEKFSNKKIINKVFPRIPYEQSMLKYGTDKPDLRNPLVIL 300

Query: 301 NVTEHFVHSEFRV-FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           +V+E F   + +    K L          +  +     R+F D +++WARS+G  GLAY 
Sbjct: 301 DVSEIFKREDVKFEIFKKLVSKGNIVRSIVTKQTVEKPRSFFDGIDKWARSEGASGLAYF 360

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  +  G ++G G + K  +  + + I    D + GDS FF  G   +     + AR  
Sbjct: 361 SF-EESDGKISGKGTIGKLFSEDSLKEIMKITDAEIGDSIFFACGSQSEVERILSLARTK 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +IN + F FCWI+D+P YE +E+ KKI F+HNPF+MPQG +E+L  ND L+IKA
Sbjct: 420 IAEELNLINKDEFAFCWIVDYPMYEVDEKTKKITFSHNPFSMPQGDIENLDFNDPLNIKA 479

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  ++M + FS  G SKE V+  F G+  AF  G PPHGGI
Sbjct: 480 YQYDIVCNGIELSSGAIRNHKPDLMYKLFSVAGYSKEEVDTEFSGMINAFSYGAPPHGGI 539

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A GIDRI+MLL   KN+REV++FPM+QN  DL+M +PS+V   QL++L ++ ++ 
Sbjct: 540 APGIDRIIMLLADEKNIREVTMFPMNQNAQDLMMNAPSSVKESQLKDLNIKTIKK 594


>gi|212212083|ref|YP_002303019.1| aspartyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|215919207|ref|NP_820548.2| aspartyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|206584091|gb|AAO91062.2| aspartyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|212010493|gb|ACJ17874.1| aspartyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 610

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 229/593 (38%), Positives = 339/593 (57%), Gaps = 5/593 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH    +  S +   + L GWVHR R HGG+IF+D+RD  G+ QVV NP +S  F++A+
Sbjct: 22  RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 81

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+V+ + G V  R   T+N +I +G++E++A  I +L+ ++ LP  +   +E  E 
Sbjct: 82  SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 141

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R+LDLRR  + + +  R+ II  +R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 142 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 201

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +K++LM +GFDRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 202 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 260

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ DI   ME ++R +F  F N   + + F RI YD+AI+ YGTD+PDLRNP+ + +VT
Sbjct: 261 VEEKDIQQLMETMIRHLFSTFLNV-PLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 319

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF +  +   G        KG   +R   D   ++    G  GLAYI    
Sbjct: 320 DLMKSVEFKVFKEPANNPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVEN 379

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G      P+ K L       I  R   Q GD  FF A             R+ +  +
Sbjct: 380 IDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFFGADKAKIVNESLGALRDRLCAD 439

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     ++  W++DFP ++  E+       H+PFT  Q         +   + +  YD
Sbjct: 440 LNLY-EGQWKPVWVVDFPMFDR-EDVGDWQALHHPFTALQETDPEKVIANPGDVLSRAYD 497

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR +   +       +GISKE+ E +FG L  A Q G PP GGIA G+
Sbjct: 498 MVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLGGIAFGL 557

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+V ++ GA ++R+V  FP +Q     L  +P+ V   QL  LGL++ ++ K
Sbjct: 558 DRLVAIMTGASSIRDVIAFPKTQTAQCPLTNAPAQVETLQLETLGLKVSKHRK 610


>gi|332993892|gb|AEF03947.1| aspartyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 586

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 209/592 (35%), Positives = 332/592 (56%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG++  S +G  + L GWV++ R  GG+IF+D+RD  GI QVV +PD      +A 
Sbjct: 2   RTDYCGNIDSSYIGQEITLCGWVNKRRDLGGVIFIDLRDREGIVQVVFDPDLPEVLSVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R E+ + + G V +R    IN ++ TG+IE+    +EI++ ++   LP+   +E  E 
Sbjct: 62  KLRGEFCVKLTGKVRARPEGQINKDMRTGEIEILGTGLEIINRSD--ALPLDWNQENSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  + + +  R ++  ++R  +  E F++  TPILT ++PEGARD+LVP
Sbjct: 120 QRLRYRYLDLRRPVMSQRLQFRAKVTGAVRRFLEGEGFLDIETPILTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D+E +F
Sbjct: 180 SRTHKGEFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETTF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++ D ++   E+++R +F    N +    +F R+ Y +A++R+G+DKPDLRNP+ + ++ 
Sbjct: 239 LDADGVMAITESMIRDLFSTMLNVD--LGDFPRMTYAEAMKRFGSDKPDLRNPLELTDIA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DLLETVEFKVFSGPANDPKGRVAAIRVPGGASMSRKQIDEYTKFVGIYGAKGLAWMKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K L+   T+ I  R   Q GD   F A             R  + ++
Sbjct: 357 MAPGQEGLQSPILKFLSEDITDGILQRTGAQAGDILLFGADTNTVVTEAMGALRLKLGED 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++    ++  W++DFP +E  E + ++   H+PFT  +G        + +   +  YD
Sbjct: 417 FELL-EGEWKPLWVVDFPMFE--EFDGQLHAIHHPFTALRGLTAEELKANPVGALSDAYD 473

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  E+    F  +GI +E  +N+FG L  A + G PPH G+A G+
Sbjct: 474 MVLNGCELGGGSVRIHNEEMQSAVFEILGIEEEEAKNKFGFLLDALRFGAPPHAGLAFGL 533

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+VML+ GA ++R+V  FP +      L  +PS  + +QL EL +  V+ P
Sbjct: 534 DRLVMLMTGASSIRDVMAFPKTTTAACPLTSAPSPANPQQLEELAIATVKKP 585


>gi|145299764|ref|YP_001142605.1| aspartyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166225315|sp|A4SPN5|SYD_AERS4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|142852536|gb|ABO90857.1| aspartyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 588

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 215/591 (36%), Positives = 322/591 (54%), Gaps = 8/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +  +  G  + L GWVHR R  GG+IF+D+RD  GI QV  +PD    F +A 
Sbjct: 2   RSIYCGQVNEAHAGQTITLCGWVHRRRDLGGLIFIDMRDREGIVQVFFDPDKPDAFALAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R E+ + + G+V +R     N+++ TG IE+ A ++ I++ AE   LP+   +   E 
Sbjct: 62  ELRGEFCIQVSGVVRTRPDSQRNSDMATGAIEVFAHELTIINRAEP--LPLDFNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLRR  + K +  R +    +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKFRYLDLRRPEMAKYLKTRAKASAFVRRFMDEHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R +++     +    +F  + +D+A+RR+G+DKPDLR P+ + +V 
Sbjct: 239 MTAPQVRELMEEMIRNLWQHVLAVD--LGDFPVMTFDEAMRRFGSDKPDLRLPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D   ++    G  GLA++    
Sbjct: 297 DLLTAVEFAVFAGPANDPKGRVAALKVPGGAELSRKQIDEYTKFVGIYGAKGLAWMKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L+      I  R    DGD  FF A             R  + ++
Sbjct: 357 AANGIEGVQSPVAKFLSDEIVREILARTGAADGDIIFFGADSKKVVADAIGALRLKVGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG++  N ++  W++DFP +E + E   +   H+PFT P     S    + LS  A  YD
Sbjct: 417 LGLM-ENSWKPLWVIDFPMFEEDSE-GGLAAMHHPFTAPSNLGPSELKANPLSAYANAYD 474

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H SE+    F  +GI+      +FG L  A + G PPH G+A G+
Sbjct: 475 MVINGYEVGGGSVRIHNSEMQATVFDILGITPAEQRLKFGFLLDALKYGTPPHAGLAFGL 534

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR+ MLL G  N+R+V  FP +     L+  +PS  +  Q+ EL +     
Sbjct: 535 DRLSMLLTGTDNIRDVIAFPKTTAAACLMTDAPSFANQAQMSELAIATTVK 585


>gi|330466927|ref|YP_004404670.1| aspartyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328809898|gb|AEB44070.1| aspartyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 606

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 229/599 (38%), Positives = 339/599 (56%), Gaps = 16/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  +D G+ V L+GWV R R HGG+IF+D+RD  G+ QVV        E A +
Sbjct: 3   RTHDAGSLRATDAGTTVTLAGWVARRRDHGGVIFVDLRDGSGVVQVVFR-----EEDAHA 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  + TG+IE++A ++++LS A  LPLPV  +    + I
Sbjct: 58  LRNEYCVKVVGEVTRRPEGNENPELPTGEIEVTASELDVLSEAAPLPLPVDDQVVAGDDI 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR    K +  R+R     R  +   +F+E  TP LT S+PEGARDFLVP 
Sbjct: 118 RLKYRYLDLRRSGPAKAMRLRSRANQLARTVLHERDFLEIETPTLTRSTPEGARDFLVPV 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 178 RLQPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +DD+++  E ++  ++ + +          RI + DA+ RYG+DKPDLR  + +  +T+
Sbjct: 237 TEDDVIDLGEAIVSALWSDLAGYEI-PRPIPRITWHDAMARYGSDKPDLRYGVELTELTD 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +   + FRVF+  +          +   G    R   D   +WA+++G  GLAY+   + 
Sbjct: 296 YLRGTTFRVFAGAIDAGGYV-GAVVMPGGASQTRKELDGWQDWAKARGAKGLAYV---VL 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHIAQE 423
           ++      GPVAK+L+  +   +   +  + GD+ FF  + +  +       AR  IA+ 
Sbjct: 352 DAETGEARGPVAKNLSAEHLNGLADAVGAKPGDAIFFAASAETREAQELLGAARIEIAKR 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEE----KKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            G+I+ + + FCW++D P +E   +E          H+PFT P                A
Sbjct: 412 AGLIDESAWAFCWVVDAPMFERTSDESGAADGWTAVHHPFTSPNSEWVDRFEEAPDRALA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           + YD+VCNG EI  G IR H  +V  + F  +GI+ E  +++FG L  AF  G PPHGGI
Sbjct: 472 YAYDIVCNGNEIGGGSIRIHRRDVQQRVFDLLGITPEEAQDKFGFLLEAFSYGPPPHGGI 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           A G DR+ MLL GA ++REV  FP ++   D L G+P+ ++ +Q  E G+     P + 
Sbjct: 532 AFGWDRVCMLLAGADSIREVIAFPKTRGGFDPLTGAPTPITAQQRTEAGIDAKPKPTQA 590


>gi|328950736|ref|YP_004368071.1| aspartyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451060|gb|AEB11961.1| aspartyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 586

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 231/600 (38%), Positives = 329/600 (54%), Gaps = 22/600 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RTH CG+L  + VG  V L GWV+R R  GG+IF+D+RD  G+ QVV  P+S  F  A
Sbjct: 1   MKRTHYCGELTRAHVGERVTLEGWVNRRRDLGGLIFVDLRDRAGLVQVVVPPESPAFAEA 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE--------LPLPV 114
             VR E+V+ + G V  R A+ +N  + TG++E+ A+ + +L+ A+              
Sbjct: 61  DRVRGEYVVRVSGTVRERPADQVNPRLATGEVEVLAEAVTVLAEAKTPPFAVDAGWRGEA 120

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                  E +R KYR+LDLRR  +   +  R R+I ++   +  E FI+  TP LT S+P
Sbjct: 121 DPTDRVNEDLRLKYRYLDLRRKGMQDKLRLRHRVIKAIWDFLDREEFIQVETPFLTRSTP 180

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EGARDFLVPSR+  G FYALPQ+PQ +KQ+LM +G DRYFQIA CFRDED R+DR P +F
Sbjct: 181 EGARDFLVPSRLEPGRFYALPQSPQLFKQMLMIAGVDRYFQIARCFRDEDLRADRQP-DF 239

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            QLD+EMSFV+ +D+L   E ++  VF E      V   F R+ Y +A+ RYG+DKP++ 
Sbjct: 240 TQLDLEMSFVDVEDVLELNERLVAHVFREALGVE-VPTPFPRLAYREAMNRYGSDKPEIG 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354
             + + + TE F  SEFR F  ++      +    P +    +R     + E A+  G  
Sbjct: 299 FGLELVDATEAFRASEFRAFRSVVEAGGVVKALVCPRE---LSRKEVAALEEEAKRHGAK 355

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GLA+              G +AK L       +   L  + G +  F+A           
Sbjct: 356 GLAWAKVT-----PEGPAGGIAKFLPAD----LAQTLGAEPGATLLFVADCWETAVKALG 406

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  + + LG+I    F F W++DFP  EW+EE  +  + H+PFT P          D 
Sbjct: 407 AVRLELGRRLGLIPEEGFRFLWVVDFPLLEWDEEAGRWTYMHHPFTSPVEADLEYLETDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YDLV NG E+  G IR H  +V  + F  +GI +     +FG    A + G P
Sbjct: 467 GRVRAKAYDLVLNGTEVGGGSIRIHRVDVQRRMFQALGIGEAEAREKFGFFLEALEYGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR++ L+ GA ++REV  FP +Q+  D L  +P+ V+ EQL ELG+R+VE 
Sbjct: 527 PHGGIAWGLDRMLALMAGAASIREVIPFPKNQSGRDPLTDAPAVVAPEQLAELGIRVVEE 586


>gi|81300122|ref|YP_400330.1| aspartyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|97196966|sp|Q31NM6|SYD_SYNE7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|81169003|gb|ABB57343.1| aspartyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 599

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 234/600 (39%), Positives = 347/600 (57%), Gaps = 17/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L    VG+ V L GWV R R HGG+IF+D+RD  G  Q+V++P+     +  A
Sbjct: 2   RTHYCGELRAEQVGTSVTLYGWVDRRRDHGGVIFVDLRDRTGTVQIVSDPERTPESYHQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           + +R+E+V+ I G V  R AE++N  + TG++E+ A +IEIL+         +    E  
Sbjct: 62  EGLRNEYVVKITGRVSGRPAESLNPKLPTGEVEIYADRIEILNAVRRQLPFQVSSADEET 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R +YR+LDLRRD +++N+  R +++ ++R  +   E FIE  TP+LT S+PEGAR
Sbjct: 122 VREDLRLRYRYLDLRRDRMNRNLQLRHQVVKAIRRFLEDEEQFIEIETPVLTKSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G ++ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGEWFALPQSPQLFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ Q++I++  E ++  +F+       +   F R+ Y +A+ RYG+D+PD R  + 
Sbjct: 241 MEMSFLSQEEIIDLNERLIAHIFKTVKGIE-LPRPFPRLTYAEAMDRYGSDRPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V++      F+VFS  +      ++  IP      +         + + A   G  G
Sbjct: 300 LVDVSDVVADMGFKVFSGAVKSGGKVKILPIPDGNDRISNVRIKPGGDIFKEATEAGAAG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI  R+ E+G +  +G +  +L+      I  R   Q G    F AG           
Sbjct: 360 LAYI--RVRENGEIDTIGAIKDNLSDEQKAEILRRTQAQPGTLLLFGAGSTDIVNKSLDR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  + +ELG+I+       W++DFP  EWN +EK+ +  H+PFT P          DL 
Sbjct: 418 VRQFLGKELGLIDPEALNLLWVVDFPMVEWNADEKRYEALHHPFTAPNPQDL----EDLT 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YD+V NG EI  G +R +  ++  + F  +G+S E  + +FG L  AF  G PP
Sbjct: 474 TARAQAYDIVLNGLEIGGGSLRIYQRDIQERVFETIGLSHEEAQAKFGFLLEAFDFGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL G +++R+   FP +Q    LL  +P+ VS  QL+EL +     P
Sbjct: 534 HGGIAYGLDRLVMLLTGEESIRDAIAFPKTQQARCLLTEAPADVSDRQLKELYVASTWQP 593


>gi|206901021|ref|YP_002250688.1| aspartyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|238064705|sp|B5YDT0|SYD_DICT6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|206740124|gb|ACI19182.1| aspartyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 593

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 244/595 (41%), Positives = 351/595 (58%), Gaps = 11/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTH CG++ + +VG  V LSGWVHR+R HGG+IF+D+RD  GI Q+V +P      + IA
Sbjct: 3   RTHYCGEINIKNVGEKVSLSGWVHRIRHHGGLIFIDLRDRSGIVQLVVDPAISQESYNIA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++ +EWV+ ++G V  R     N  I TG+IE+  +KI I + ++ LP  ++  +E  E
Sbjct: 63  DTLGNEWVISVEGKVRKRPEGMENPKIPTGEIEIEVEKINIENPSKPLPFNLWSNKEIDE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLRRD +  NI+ R   I ++R  +    FIE  TP L  S+PEGARDF++
Sbjct: 123 TVRLKYRYLDLRRDKMQSNIIFRHNFILAIRNFLAQNGFIEIETPYLIVSTPEGARDFII 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQ+LM SGFDRYFQIA CFRDED R+DR P EF QLDMEMS
Sbjct: 183 PSRLQPGKFYALPQSPQLFKQILMVSGFDRYFQIARCFRDEDLRADRQP-EFTQLDMEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE +DI N +EN+ +   +   N +  +  F RI Y++A+  YG+DKPDLR  + + +V
Sbjct: 242 FVEIEDIFNIIENLFKTTLKNLMNIDI-TVPFPRITYEEAMNTYGSDKPDLRYDLKISDV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE F +         L  N   +   I  K    +R     +    R     G+ +  + 
Sbjct: 301 TEIFKNLPLEFIRSTLEKNGVIK--GIILKNIVPSRREWSIIENKVRELKGKGIMWFTYT 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E         ++K+L+      +   L++++GDS F IAG+  +        R  IA+
Sbjct: 359 DGE-----LKSSISKYLDENTKNKLIENLNLREGDSFFCIAGEWKEVVKILGTLRLEIAE 413

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              I       F W+ DFP +E++EEE++I   H+PFT P+     L   D L +KA  Y
Sbjct: 414 LFNIEKKEGLYFLWVTDFPLFEYDEEERRIVAEHHPFTSPKDEDIPLLDTDPLKVKAKCY 473

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+ SG IR H  E+  + F+ + I+ E  + +FG L  AF+ G PPHGGIA G
Sbjct: 474 DLVLNGTELGSGSIRIHKKEIQEKVFNILNITPEDAKKKFGFLLEAFEYGAPPHGGIALG 533

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           IDRI+ +L  + ++R+V  FP +Q+   LL G+PS V  +QL E+ +R+V   +K
Sbjct: 534 IDRIIAILTKSNSLRDVIAFPKTQSGTCLLTGAPSEVDSKQLEEVHIRVVYPEEK 588


>gi|299822823|ref|ZP_07054709.1| aspartate--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816352|gb|EFI83590.1| aspartate--tRNA ligase [Listeria grayi DSM 20601]
          Length = 592

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 225/597 (37%), Positives = 342/597 (57%), Gaps = 9/597 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
           + RT  CG +   D+   V L GWV + R  GG+IF+D+RD  GI QVV NP   +    
Sbjct: 2   KKRTTYCGQVSEQDIDKKVILHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPANSADALA 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +R+E+V+ ++G V +RS   +N  I TG++E+ A+ I IL+ ++  P  +      
Sbjct: 62  VAEKIRNEFVVTVEGTVAARSESAVNDKIATGKVEVLAESITILNSSKTPPFYIEDGVNV 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  +++    R  +  + R ++    F++  TP LT S+PEGARD+
Sbjct: 122 ADELRLKYRYLDLRRPEMNQIFRMRHLVTQTFRDKLNELGFLDIETPYLTKSTPEGARDY 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  GSFYALPQ+PQ  KQLLM++GFD+Y+QI  CFRDED R DR P EF Q+D+E
Sbjct: 182 LVPSRVYPGSFYALPQSPQIMKQLLMSAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ +++I   ME +L  V +           F R+ Y +A+ RYG DKPD+R  + + 
Sbjct: 241 TSFLSKEEIQTIMEEMLAAVVKNVKGIEI-ERPFRRMTYTEAMDRYGIDKPDIRFGLELK 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+      +F+VF+  +      +        G  +R   D +  +A + G  GLA++ 
Sbjct: 300 DVSPIVKDVDFKVFTGAIENGGQVKAINAKKAAGNYSRKDIDALGAFAANYGAKGLAWLK 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               E+G +   GP+AK  +     A++  L+++DGD   F+A       +  A  RN +
Sbjct: 360 A---EAGELK--GPIAKFFDADKQTALKEILEVEDGDLLLFVADKKDVVAASLAALRNKL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +ELG+I+ +   F WI D+P +E++EE  +   AH+PFT+PQ    +L  +      A 
Sbjct: 415 GKELGLIDEDELAFIWITDWPLFEYDEEAGRFVSAHHPFTLPQEDDIALLESAPEKAMAE 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  +V  + F  +G S E ++ +FG L  A + G PPHGGIA
Sbjct: 475 AYDIVLNGYEIGGGSLRIYQKDVQEKMFRALGFSDEAMQEQFGFLLEALEYGFPPHGGIA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRIVM+L    N+R+   FP + +  D L  +P TVS  QL EL L + +   K
Sbjct: 535 LGLDRIVMILAKRTNLRDTIAFPKTGSASDPLTNAPDTVSDAQLHELELVVEKKEAK 591


>gi|168204884|ref|ZP_02630889.1| aspartyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168208633|ref|ZP_02634258.1| aspartyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170663642|gb|EDT16325.1| aspartyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170713220|gb|EDT25402.1| aspartyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 597

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 339/595 (56%), Gaps = 13/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            R   CGD   S +G  V + GWV R R  GG+ F+D+RD  GI QVV N D      E 
Sbjct: 9   KRNIMCGDARESHIGQKVTVMGWVQRNRNLGGLQFIDLRDREGILQVVFNDDLGEEILEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AKS+R E+ + + G ++ R  E++N N+ TG +EL A++++ILS ++  P+ +  + +  
Sbjct: 69  AKSIRPEYCIAVTGEIVKR--ESVNPNMPTGMVELKAEELKILSESDTPPIYIKEDLDAA 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           ESIR KYR+LDLRR  +      R +   ++R  +    F+E  TPILT S+PEGARD+L
Sbjct: 127 ESIRLKYRYLDLRRPDMQNIFKIRHKTTKAIRDYLDQNGFLEMETPILTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R++R P EF Q+D+EM
Sbjct: 187 VPSRNYPGMFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRANRQP-EFTQVDLEM 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQDD++   E +++ VF+E    + V     R+ + DA+ +YG+DKPDLR  + + N
Sbjct: 246 SFVEQDDVMALNEGLIKHVFKEVLGVD-VKTPIKRMTFKDAMEKYGSDKPDLRFGMEITN 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++      F+VF+  ++         +   G    R   DR+ E+ ++    GLA+I  
Sbjct: 305 LSDVVKECGFKVFTDAVANGGSVRGLCL-EGGASMGRKDIDRLGEFVKTFKAKGLAWIQL 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +           P+AK  +      I   +  + GD    +A           + R  ++
Sbjct: 364 K-----EEGVKSPIAKFFSEEELNKIIETMGAKTGDLILIVADKNSVVLKALGELRLELS 418

Query: 422 QELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           ++  ++ + + F F WI +F   E++EEE +   AH+PFTMP          D   ++A 
Sbjct: 419 RKFDLVKDKSEFNFTWITEFDLLEYDEEEGRYFAAHHPFTMPMDEDIQYLDTDPGRVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H +++  + F  +G ++E    RFG L  AF+ G PPHGG+A
Sbjct: 479 AYDLVLNGEELGGGSIRIHDTKLQEKMFEVLGFTQESAWERFGFLLEAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+DR++M L G +N+++V  FP +QN    L  +P+ V  EQL+ELG+  ++  
Sbjct: 539 FGLDRMIMFLAGTENIKDVITFPKNQNAFCYLTEAPNIVDEEQLKELGIETIKKE 593


>gi|257416406|ref|ZP_05593400.1| aspartyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257158234|gb|EEU88194.1| aspartyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|315147633|gb|EFT91649.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX4244]
          Length = 589

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 226/591 (38%), Positives = 333/591 (56%), Gaps = 10/591 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
            RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+     +EI
Sbjct: 3   KRTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A   RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    
Sbjct: 63  ADKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVN 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+L
Sbjct: 123 DELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F+  ++I    EN+L  V +E       S  F R+ YD+A+ RYG+DKPD R  + + +
Sbjct: 242 TFLTPEEIQTYTENMLAEVMKETKGIEI-SVPFPRMSYDEAMARYGSDKPDTRFAMELID 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V +     +F+VF   L      +           +R   D + ++    G  GLA++  
Sbjct: 301 VADVVKDVDFKVFQAALENGGHVKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWLKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK L    ++ +    + + GD   F A  P    +     R  + 
Sbjct: 361 EED-----GLKGPIAKFLT-EVSDELIAATNAEVGDILMFGADKPEIVAAALGAVRTRLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+    +    D  S+ A  
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLAIDPASVYAEA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA 
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIAL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 535 GLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|312143968|ref|YP_003995414.1| aspartyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904619|gb|ADQ15060.1| aspartyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 591

 Score =  613 bits (1580), Expect = e-173,   Method: Composition-based stats.
 Identities = 228/592 (38%), Positives = 336/592 (56%), Gaps = 11/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTH CG++   +    + + GWV + R HGG+IF DIRD  GI QVV NPD     F  
Sbjct: 9   KRTHLCGEISKKNESQEIIIMGWVQKRRDHGGVIFADIRDRSGIIQVVFNPDIGEESFSK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+V+ + G V  R    IN +I TG+IE+  Q++ IL  A+  P+ V  + +  
Sbjct: 69  ADQLRSEYVVAVKGEVELRPEGNINPDIYTGEIEIKCQELRILDKAKTPPIQVEDDIDAG 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR KYR+LDLRR  + + +  R +I  + R  +    F E  TPILT S+PEGARD+L
Sbjct: 129 EDIRLKYRYLDLRRPKMTQIVGLRHKITKATRDYLDQNGFWEIETPILTKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G F+ALPQ+PQ +KQLLM SG +RYFQIA CFRDED R++R P EF Q+DMEM
Sbjct: 189 VPSRVNPGQFFALPQSPQIFKQLLMVSGMERYFQIARCFRDEDLRANRQP-EFTQIDMEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV ++D+      +++ +F E      V +   ++ Y +A+ R+GTDKPDLR  + + +
Sbjct: 248 SFVNREDVFEITNGLMKKIFAEV--DIDVPDKIKKMSYQEAMERFGTDKPDLRFGMELKD 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++    +S F +FS  +      +       G   +R+  D   E  +     GLA+I  
Sbjct: 306 LSPIVENSNFNIFSGTVKSGGQVKGINYK-GGADSSRSIIDNFEEHVKLFKAKGLAWIAL 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R  E        P+AK L+    + I  +++ ++GD    +A       +  ++ R  IA
Sbjct: 365 RDGE-----LKSPIAKFLSKEELDNILTKMNAEEGDLLLIVADKASIVANALSNLRLKIA 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++  +I    ++F WI+DFP +E++EEE      H+PF  P          D  S++A  
Sbjct: 420 KDFDLIPSEVYKFVWIIDFPLFEYDEEEDCFQSKHHPFAAPVDEDIDKLEKDPASVRADA 479

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G IR +   +  + FS + +S++  + +FG L  AF  G PPHGGIA 
Sbjct: 480 YDLVLNGEELGGGSIRINNRPLQQKVFSVLSMSEKEQQEKFGFLLEAFDYGTPPHGGIAF 539

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G+DR++M+     ++R+V  FP +Q    LL  +PS VS +QL+ELGL +  
Sbjct: 540 GMDRLMMITARTDSIRDVIAFPKTQRATSLLTNAPSKVSKKQLKELGLSLRS 591


>gi|160872166|ref|ZP_02062298.1| aspartyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120965|gb|EDP46303.1| aspartyl-tRNA synthetase [Rickettsiella grylli]
          Length = 590

 Score =  612 bits (1579), Expect = e-173,   Method: Composition-based stats.
 Identities = 221/591 (37%), Positives = 327/591 (55%), Gaps = 4/591 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH C  L  + V   V + GWVH  R HGGIIF+D+RD  G+ QVV NP+ S  F+ A+
Sbjct: 3   RTHYCQQLNSNLVNETVHVCGWVHHRRDHGGIIFIDLRDRSGLLQVVFNPEQSELFKQAE 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+V+ I G +  R   T N  + +G IEL    + IL+ +  LP+ +       E 
Sbjct: 63  TLRNEYVVQISGEIRLRPQGTENTQLKSGNIELKPTALIILNTSAPLPISIDAYTPVSEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +  +YR+LDLRR  + +   +RT ++  +R     + F+E  TP+LT ++PEGARD+LVP
Sbjct: 123 VALRYRYLDLRRSEVQERFRRRTEMVKLIRHFYEEKGFLEIETPVLTKATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+  G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF QLDMEMSF
Sbjct: 183 SRIYPGEFYALPQSPQLFKQLLMIAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDMEMSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
             ++DI    E+++  +F++    +     F R+ Y  A++RYG+DKPDLR P  + ++ 
Sbjct: 242 CSEEDIQTLNESLICYLFKKLLAVDLPC-PFPRLSYATAMQRYGSDKPDLRIPFELVDIA 300

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   +  F+VFS                +G    R   +    +A   G  GLAY+    
Sbjct: 301 DLVENITFKVFSDPAKDANARVTALRIPQGAELTRKAIETYTHYAAIFGAKGLAYLKVFD 360

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+ K +      AI  R+D + GD  FF AGD           R  +  +
Sbjct: 361 PSQGVKGLQSPILKFIPDAVVNAILQRVDAKKGDIIFFGAGDAKIVSESLGALRVKLGHD 420

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
              I    F   W++DFP +E+ +EEK+    H+PFT P+    +    +  +  +  YD
Sbjct: 421 FNCIKEGWF-PLWVVDFPLFEFEKEEKRWKALHHPFTAPKITNAAELLANPEACLSRAYD 479

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G IR H S +    F  + +S+   + +FG    A + G PPHGG+A G+
Sbjct: 480 MVLNGCEVGGGSIRIHDSAIQKAVFDRLTLSEAEQKEKFGFFLEALKFGCPPHGGMAFGL 539

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR+VML+  A+++R+V  FP +Q     L  +PS VS +QL+EL L+I + 
Sbjct: 540 DRLVMLMTNAQSIRDVIAFPKTQTGHCPLTHAPSLVSEQQLKELALQIRKK 590


>gi|256961541|ref|ZP_05565712.1| aspartyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|293384699|ref|ZP_06630554.1| aspartate--tRNA ligase [Enterococcus faecalis R712]
 gi|293387399|ref|ZP_06631954.1| aspartate--tRNA ligase [Enterococcus faecalis S613]
 gi|312908315|ref|ZP_07767279.1| aspartyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312910611|ref|ZP_07769453.1| aspartyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|256952037|gb|EEU68669.1| aspartyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|291078006|gb|EFE15370.1| aspartate--tRNA ligase [Enterococcus faecalis R712]
 gi|291083190|gb|EFE20153.1| aspartate--tRNA ligase [Enterococcus faecalis S613]
 gi|310625729|gb|EFQ09012.1| aspartyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311289159|gb|EFQ67715.1| aspartyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
          Length = 589

 Score =  612 bits (1579), Expect = e-173,   Method: Composition-based stats.
 Identities = 226/591 (38%), Positives = 333/591 (56%), Gaps = 10/591 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
            RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+     +EI
Sbjct: 3   KRTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAWEI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A   RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  +    
Sbjct: 63  ADKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNNVN 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGARD+L
Sbjct: 123 DELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 183 VPSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDIET 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F+  ++I    EN+L  V +E       S  F R+ YD+A+ RYG+DKPD R  + + +
Sbjct: 242 TFLTPEEIQTYTENMLAEVMKETKGIEI-SVPFPRMRYDEAMARYGSDKPDTRFAMELID 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V +     +F+VF   L      +           +R   D + ++    G  GLA++  
Sbjct: 301 VADVVKDVDFKVFQAALENGGHVKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWLKV 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK L    ++ +    + + GD   F A  P    +     R  + 
Sbjct: 361 EED-----GLKGPIAKFLT-EVSDELIAATNAEVGDILMFGADKPEIVAAALGAVRTRLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+    +    D  S+ A  
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAEA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A   G PPHGGIA 
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIAL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL + + 
Sbjct: 535 GLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVT 585


>gi|326343796|gb|EGD67558.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 577

 Score =  612 bits (1579), Expect = e-173,   Method: Composition-based stats.
 Identities = 215/580 (37%), Positives = 322/580 (55%), Gaps = 7/580 (1%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGL 76
           G  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G 
Sbjct: 2   GQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGT 61

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR 
Sbjct: 62  VRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRP 119

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ
Sbjct: 120 EMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQ 179

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME +
Sbjct: 180 SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEAL 238

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+ 
Sbjct: 239 VRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLRSVEFAVFAG 296

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
             +   G         G    R   D    + +  G  GLAYI       G      PVA
Sbjct: 297 PANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVA 356

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K LN    EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W
Sbjct: 357 KFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLW 416

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           ++DFP +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +
Sbjct: 417 VIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSV 475

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+
Sbjct: 476 RIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNI 535

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 RDVIAFPKTTAAACLMTEAPSFANPAALAELSIQVVKKAE 575


>gi|302543884|ref|ZP_07296226.1| aspartate-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302461502|gb|EFL24595.1| aspartate-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 605

 Score =  612 bits (1579), Expect = e-173,   Method: Composition-based stats.
 Identities = 292/610 (47%), Positives = 399/610 (65%), Gaps = 11/610 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  +DV + VRLSGW+H  R  GGI+F+D+RDHYG+ Q+V  PD+A  E
Sbjct: 1   MHRYRSHNCGQLRAADVDTDVRLSGWLHNRRNLGGILFIDLRDHYGLVQLVVRPDTAANE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              S+  E V+ +DG V++R A+ +N  + TG+IE+    +E+L  A+ LP  V+ E   
Sbjct: 61  KLSSISKESVVRVDGRVIARGADNVNPELPTGEIEVEVADVEVLGAADPLPFTVYPEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R ++RFLDLRR+ +H+NI+ R+ +I+++R +M A+ F E +TPIL+A+SPEGARDF
Sbjct: 121 GEERRLEHRFLDLRRERMHRNIMLRSAVISAIRQKMTAQGFNEMATPILSATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLHAGKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E V+  +FEEF NG  V++ F RI +  A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFEVIEKVMTELFEEFGNGRHVTSPFPRIPFRQAMLKYGSDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+  F  S F+ F+     +      A+P       R F D+M E+A  QG  GLA++ 
Sbjct: 301 DVSHVFAGSGFKAFA-----DKHVRALAVPDT-AEQPRKFFDQMGEFAVEQGAKGLAWVR 354

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+AK L   + E +   ++ + G S FF AGD  +        R   
Sbjct: 355 IGED----SKLTGPIAKFLTDEDVEKLIAEVEGKPGTSIFFGAGDFDEVSKIMGAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G    N F FCWI+DFP +E NE+  +I+F+HNPF+MPQGG+++L+  D L I A+
Sbjct: 411 AKRTGHFEENVFRFCWIVDFPMFERNEDTGEIEFSHNPFSMPQGGLDALENQDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  +VM +AF   G S++ VE  FGG+ RAF  G PPHGGIA
Sbjct: 471 QYDIVCNGTELSSGAIRNHEPDVMFKAFGIAGYSRDEVEREFGGMLRAFHFGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP-KKIL 599
            G+DRIVMLL    N+RE   FP++ N  DLLMG+PS V   +LREL L + +   K+  
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLLMGAPSEVDEARLRELHLSVRKPQIKQAE 590

Query: 600 KISVTTILRN 609
           K         
Sbjct: 591 KAEKAEKPVE 600


>gi|284007618|emb|CBA73238.1| aspartyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 587

 Score =  612 bits (1579), Expect = e-173,   Method: Composition-based stats.
 Identities = 224/594 (37%), Positives = 337/594 (56%), Gaps = 10/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIA 62
           RT+ CG LGV+ VG  V L GWV+R R  G +IF+D+RD  G+ QVV      +  F  A
Sbjct: 2   RTNYCGQLGVAHVGQKVTLCGWVNRQRNLGKLIFVDMRDREGLVQVVFLQEKHAELFTQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+E+ + I G+V  R  E IN  I TG+IE+ A+ + I++ +E   LP+   ++  E
Sbjct: 62  SQLRNEFCIQITGMVRKR--EQINKEIPTGEIEIVAEALTIINRSEP--LPIDSNQQNSE 117

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  +   + +R +I + +R  M AE F++  TPILT ++PEGARD+LV
Sbjct: 118 EIRLKYRYLDLRRPEMATRLRERAKITSFVRRFMDAEGFVDIETPILTKATPEGARDYLV 177

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E S
Sbjct: 178 PSRVHKGEFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETS 236

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  + +   ME ++R ++++  N       F  + + +A++RYG+DKPDLRNP+ + ++
Sbjct: 237 FMTAEQVREVMERLIRNLWQK--NKGIELGTFPVMTFAEAMQRYGSDKPDLRNPLELIDI 294

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF++  +   G         G    R   D   E+    G  GLA++   
Sbjct: 295 ADLVNLVEFKVFAEAANDPKGRVAALCVPGGATLTRKQLDGYAEFVAIYGAKGLAWMKVN 354

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                      P+AK L     + +  R   + GD   F AG            R  + +
Sbjct: 355 SLAENQADIQSPIAKFLPQHVIDNLLARTQAKAGDILLFGAGKQNVVNDAMGALRLKVGR 414

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L I   N ++  WI+DFP +E + E  +++  H+PFT P+         + L+  A  Y
Sbjct: 415 DLAITQNNSWKPLWIIDFPMFEED-EHGELNAMHHPFTAPKDFTPEQLQANPLAAVANAY 473

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G +R H +++    F  + IS+   +++FG L  A Q G PPH G+A G
Sbjct: 474 DMVINGYEVGGGSVRIHHNKMQQAVFEILNISQTDQQDKFGFLLEALQYGTPPHAGLAFG 533

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR+VMLL G +N+R+V  FP +     L+  +PS  +   L EL + +VE  K
Sbjct: 534 LDRLVMLLTGTENIRDVIAFPKTTAAACLMTDAPSKANPAALAELAITVVEKIK 587


>gi|209363787|ref|YP_001423843.2| aspartyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|207081720|gb|ABS76474.2| aspartyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 610

 Score =  612 bits (1579), Expect = e-173,   Method: Composition-based stats.
 Identities = 229/593 (38%), Positives = 339/593 (57%), Gaps = 5/593 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH    +  S +   + L GWVHR R HGG+IF+D+RD  G+ QVV NP +S  F++A+
Sbjct: 22  RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 81

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+V+ + G V  R   T+N +I +G++E++A  I +L+ ++ LP  +   +E  E 
Sbjct: 82  SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 141

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R+LDLRR  + + +  R+ II  +R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 142 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 201

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +K++LM +GFDRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 202 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 260

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ DI   ME ++R +F  F N   + + F RI YD+AI+ YGTD+PDLRNP+ + +VT
Sbjct: 261 VEEKDIQQLMETMIRHLFSTFLNV-PLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 319

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF +  +   G        KG   +R   D   ++    G  GLAYI    
Sbjct: 320 DLMKSVEFKVFKEPANNPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVEN 379

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G      P+ K L       I  R   Q GD  FF A             R+ +  +
Sbjct: 380 IDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFFGADKAKIVNESLGALRDRLCAD 439

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     ++  W++DFP ++  E+       H+PFT  Q         +   + +  YD
Sbjct: 440 LNLY-EGQWKPVWVVDFPMFDR-EDVGDWQALHHPFTALQETDPEKVIANPGDVLSRAYD 497

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR +   +       +GISKE+ E +FG L  A Q G PP GGIA G+
Sbjct: 498 IVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLGGIAFGL 557

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+V ++ GA ++R+V  FP +Q     L  +P+ V   QL  LGL++ ++ K
Sbjct: 558 DRLVAIMTGASSIRDVIAFPKTQTAQCPLTNAPAQVETLQLETLGLKVSKHRK 610


>gi|113461366|ref|YP_719435.1| aspartyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123327310|sp|Q0I3S3|SYD_HAES1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|112823409|gb|ABI25498.1| aspartyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 585

 Score =  612 bits (1579), Expect = e-173,   Method: Composition-based stats.
 Identities = 212/589 (35%), Positives = 328/589 (55%), Gaps = 7/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S +G  V LSGWVH+ R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 2   RSHYCGALNRSHIGQQVILSGWVHKRRDLGGLIFIDMRDREGIVQVCFDPKYQEALTEAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + I+G V++R    IN N+ TG++E+ A+ + + +V++   LP+   +   E 
Sbjct: 62  ALRNEFCIKIEGEVIARPDNQINKNMATGEVEVVAKALSVYNVSD--VLPLDFNQNNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +++  R +I   +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMAQHLKTRAKITAFVRRYMDENGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++   +        F  + + +A+ R+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAPEVREIMEKMVHGLW--LNTIGVDLGKFPTMTWQEAMERFGSDKPDLRNPLEIVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F VFS   + + G         G    R   D   ++    G  GLA++    
Sbjct: 297 DIVKDIDFNVFSDPANSSNGRVAVIRVPNGINITRKQIDEYTQFVGIYGAKGLAWVKIND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L     +AI  R   Q GD  FF A             R  + ++
Sbjct: 357 INAGLEGVQSPIAKFLTTEKIKAIFDRTSAQSGDILFFGADKWQTATDAMGALRLKLGRD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + ++  W++DFP +E +EE   +   H+PFT P+         +  S  A  YD
Sbjct: 417 LGLTHLDEWKPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFTPEQLEANPTSAVANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI ++    +FG L  A + G PPH G+A G+
Sbjct: 476 MVINGYEVGGGSVRIFDPKMQQTVFHILGIDEDQQREKFGFLLDALKFGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           DR+ MLL G  N+R+V  FP +     L+  +PS  + + L EL ++ +
Sbjct: 536 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTDAPSLANEKALEELAIKTI 584


>gi|307329472|ref|ZP_07608633.1| aspartyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306884881|gb|EFN15906.1| aspartyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 620

 Score =  612 bits (1579), Expect = e-173,   Method: Composition-based stats.
 Identities = 293/610 (48%), Positives = 400/610 (65%), Gaps = 11/610 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG L  +DV + VRLSGW+H  R  GGI+F+D+RDHYG+ Q+V  PD+A  E
Sbjct: 1   MHRYRSHTCGQLRAADVDTDVRLSGWLHNRRNLGGILFIDLRDHYGLVQLVVRPDTAANE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              S+  E V+ IDG V++R A+ +N  + TG+IE+    +E+L  A+ LP  VF E   
Sbjct: 61  ALSSISKETVVRIDGRVIARGADNVNPELPTGEIEVEVADVEVLGAADPLPFTVFPEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I+++R +M A+ F E +TPIL+A+SPEGARDF
Sbjct: 121 GEERRLEYRFLDLRRERMHRNIMLRSAVISAIRQKMTAQGFNELATPILSATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLHAGKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E V+  +FEEF  G  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFGVIEKVMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELR 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+  F  S F+ F+     +      A+P       R F D++ E+A  QG  GLA++ 
Sbjct: 301 DVSHIFEGSGFKAFA-----DKHVRALAVPDT-ADQPRKFFDQLGEFASLQGAKGLAWVR 354

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+AK LN  + E +   +  + G S FF AG+  +        R   
Sbjct: 355 IGEDA----KLTGPIAKFLNHEDVEKLITEVQGKPGTSIFFGAGEFDEVSKIMGAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G      F FCWI+DFP +E NE+  +I+F+HNPF+MPQGG+E+L+  D L I A+
Sbjct: 411 AKRTGHFEEGVFRFCWIVDFPMFERNEDTGQIEFSHNPFSMPQGGLEALETKDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  +VM +AF+  G  ++ VE  FGG+ RAF  G PPHGGIA
Sbjct: 471 QYDIVCNGVELSSGAIRNHEPDVMYKAFALAGYDRDEVEREFGGMLRAFHFGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK-KIL 599
            G+DRIVMLL    N+RE   FP++ N  DLLMG+PS V   +LREL L + + P+ K  
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLLMGAPSEVDEARLRELHLSVRKPPQVKKA 590

Query: 600 KISVTTILRN 609
           + S       
Sbjct: 591 ETSEKAETSE 600


>gi|313672834|ref|YP_004050945.1| aspartyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939590|gb|ADR18782.1| aspartyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 596

 Score =  612 bits (1579), Expect = e-173,   Method: Composition-based stats.
 Identities = 241/595 (40%), Positives = 349/595 (58%), Gaps = 10/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L   + G  + + GWVHR R HGG+IF+D+RD  G+ Q+V NP+       IA
Sbjct: 10  RTHYCGELNGKNTGEDICVMGWVHRRRDHGGVIFIDLRDKTGLLQLVLNPEISPEAHSIA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VRSE+V+ + G V  R   TIN N+ TG+IE+  ++I+IL+ A+  P  +       E
Sbjct: 70  EAVRSEYVVAVKGKVEKRPEGTINENLPTGEIEIIVKEIKILNNAKTPPFQIEENTNVGE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  L KNI+ R  +  +MR  +  + F++  TP LT S+PEGARD+LV
Sbjct: 130 DVRLKYRYLDLRRPNLQKNIILRHNLTRTMREYLYGKGFLDIETPFLTKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQLLM SG+DRYFQI  CFRDED R+DR P EF QLDMEMS
Sbjct: 190 PSRVNPGKFYALPQSPQMFKQLLMISGYDRYFQIVRCFRDEDLRADRQP-EFTQLDMEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++ D+++ +E +   +F++ +    V   F  + Y +A+ +Y  D PD R  +    +
Sbjct: 249 FIDRQDLMDLIEGLFVEIFQKVAGIT-VQRPFPVMTYAEAMEKYSHDAPDTRFELFTKTI 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VF+  +      +        G  +R   D + ++A S G  GLAYI   
Sbjct: 308 NDLVKDCEFKVFTDAIKEGGIVKAINAK-GAGKFSRKEIDEITDYAVSLGAKGLAYIKIN 366

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D         P+ K L    T  I   +D + GD  FF AG+      F +  R  + +
Sbjct: 367 ED-----GLQSPIIKFLGEQLTHRILDTMDAKVGDIVFFGAGEKSTVNLFMSKVRLELGR 421

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            LG+I+ N + F W++DFP  EW++EEK+    H+PFT P      L   D L I+A  Y
Sbjct: 422 RLGLIDKNKYNFTWVIDFPLLEWDKEEKRYAAVHHPFTAPVDEDIPLFDTDPLKIRAKAY 481

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG EI  G IR H S++  + F+ +G++KE  + +FG    A + G PPHGGIA G
Sbjct: 482 DLVLNGSEIGGGSIRIHRSDIQEKMFNILGLTKEECDLKFGFFIEALRYGTPPHGGIAFG 541

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DRI  +L GA ++R+V  FP +Q    L+  +P+ V  +QL+EL +++    +K
Sbjct: 542 VDRIASILAGADSIRDVIAFPKTQKATCLMSDAPNKVDAKQLKELSIKLDIIEEK 596


>gi|238925266|ref|YP_002938783.1| aspartyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|259511859|sp|C4ZI12|SYD_EUBR3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238876942|gb|ACR76649.1| aspartyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 598

 Score =  612 bits (1579), Expect = e-173,   Method: Composition-based stats.
 Identities = 228/597 (38%), Positives = 345/597 (57%), Gaps = 11/597 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60
           +R+H C ++  +++G  V + GWV + R  G +IF+D+RD  GI Q+V    N  +  FE
Sbjct: 9   HRSHRCTEVSNANIGEKVTVMGWVQKRRNLGSLIFVDLRDRSGILQIVFGEENVGAEGFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A ++RSE+V+ ++G V  R+A  +N ++ TG IE+ A  I +LS A+  P  +    + 
Sbjct: 69  KAGTLRSEFVIAVEGTVQKRTA-AVNESLKTGDIEVIATSIRVLSEAQTPPFHIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LDLRR  + +N++ R+ ++  MR  M  E F+E  TPIL  S+PEGARD+
Sbjct: 128 SEDIRLKYRYLDLRRPDIQRNLMLRSNVLRVMRDFMANEGFLEIETPILCKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQ+PQ +KQLLMASG+DRYFQIA CFRDED R+DR P EF Q DME
Sbjct: 188 LVPSRIHHGHFYALPQSPQLFKQLLMASGYDRYFQIARCFRDEDLRADRQP-EFTQADME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD++   E +L+ +F+E  N + V   F R+ + +A+ R+G+DKPD R  + + 
Sbjct: 247 LSFVDIDDVIEVNERLLKHLFKEVINVD-VEIPFKRMPWQEAMDRFGSDKPDTRFGMELC 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E      F VF+  L          +  +     R   D++ E A+  G  GLAY+ 
Sbjct: 306 DVSEVVKDCGFGVFTGALENGGSVRGINVEGQ-AKMPRKKIDKLVEHAKGCGAKGLAYLC 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D           AK +     +A+  +++ + GD   F A       +     R  +
Sbjct: 365 INEDG----TYKSSFAKFMTEAELDALVAKMNGKPGDLLLFAADKNKIVWNVLGALRLML 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             ELG+I+ N + F W+ +FP  EW++EE +    H+PFTMP         +D  +++A 
Sbjct: 421 GAELGLIDENKYNFLWVTEFPLLEWSDEENRFMAMHHPFTMPMEEDWDKIDSDPGAVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H  ++  + F  +G +KE    +FG L  AF  G+PPH G+A
Sbjct: 481 AYDIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKERAHEQFGFLLDAFSYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRI M +L   N++EV  FP  ++  DL+  +P TV  +QL ELG+ +     +
Sbjct: 541 FGVDRICMHMLHTDNIKEVIAFPKVKDASDLMSEAPGTVDPKQLEELGIAVAAEEDE 597


>gi|291524449|emb|CBK90036.1| aspartyl-tRNA synthetase [Eubacterium rectale DSM 17629]
          Length = 598

 Score =  612 bits (1579), Expect = e-173,   Method: Composition-based stats.
 Identities = 228/597 (38%), Positives = 345/597 (57%), Gaps = 11/597 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60
           +R+H C ++  +++G  V + GWV + R  G +IF+D+RD  GI Q+V    N  +  FE
Sbjct: 9   HRSHRCTEVSNANIGEKVTVMGWVQKRRNLGSLIFVDLRDRSGILQIVFGEENVGAEGFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A ++RSE+V+ ++G V  R+A  +N N+ TG IE+ A  I +LS A+  P  +    + 
Sbjct: 69  KAGTLRSEFVIAVEGTVQKRTA-AVNENLKTGDIEVIATSIRVLSEAQTPPFHIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LDLRR  + +N++ R+ ++  MR  M  E F+E  TPIL  S+PEGARD+
Sbjct: 128 SEDIRLKYRYLDLRRPDIQRNLMLRSNVLRVMRDFMANEGFLEIETPILCKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQ+PQ +KQLLMASG+DRYFQIA CFRDED R+DR P EF Q DME
Sbjct: 188 LVPSRIHHGHFYALPQSPQLFKQLLMASGYDRYFQIARCFRDEDLRADRQP-EFTQADME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD++   E +L+ +F+E  N + V   F R+ + +A+ R+G+DKPD R  + + 
Sbjct: 247 LSFVDIDDVIEVNERLLKHLFKEVINVD-VEIPFKRMPWQEAMDRFGSDKPDTRFGMELC 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++      F VF+  L          +  +     R   D++ E A+  G  GLAY+ 
Sbjct: 306 DVSDVVKDCGFGVFTGALENGGSVRGINVEGQ-AKMPRKKIDKLVEHAKGCGAKGLAYLC 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D           AK +     +A+  +++ + GD   F A       +     R  +
Sbjct: 365 INEDG----TYKSSFAKFMTEAELDALVAKMNGKPGDLLLFAADKNKIVWNVLGALRLML 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             ELG+I+ N + F W+ +FP  EW++EE +    H+PFTMP         +D  +++A 
Sbjct: 421 GAELGLIDENKYNFLWVTEFPLLEWSDEENRFMAMHHPFTMPMEEDWDKIDSDPGAVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H  ++  + F  +G +KE    +FG L  AF  G+PPH G+A
Sbjct: 481 AYDIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKERAHEQFGFLLDAFSYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRI M +L   N++EV  FP  ++  DL+  +P TV  +QL ELG+ +     +
Sbjct: 541 FGVDRICMHMLHTDNIKEVIAFPKVKDASDLMSEAPGTVDPKQLEELGIAVAAEEDE 597


>gi|314948060|ref|ZP_07851462.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|313645476|gb|EFS10056.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 589

 Score =  612 bits (1579), Expect = e-173,   Method: Composition-based stats.
 Identities = 227/590 (38%), Positives = 329/590 (55%), Gaps = 10/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG +    +   V L GWV + R  GG+IF+D+RD  GI Q+V NP+     +EIA
Sbjct: 4   RTIYCGLVSEQQLEQTVTLKGWVQKRRDLGGVIFIDLRDREGIVQIVFNPEINKEAWEIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              RSE+V+ + G V  R    +N  + TG+ E+ A +I IL+  +  P  +  ++   +
Sbjct: 64  DKCRSEYVIEVTGEVRRRGENAVNPKMATGEFEVIASEIVILNQEKTPPFQIEDDQAISD 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + KNI  R     ++R  +   +F++  TP L  S+PEGARD+LV
Sbjct: 124 EIRLKYRYLDLRRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E +
Sbjct: 184 PSRVHAGHFYALPQSPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQP-EFTQVDIETT 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E ++  V +E      V+  F R+ YD+A+ RYG+DKPD R  + + ++
Sbjct: 243 FLTAEEIQTYTEGLIAKVMKEVRGIE-VTLPFPRMTYDEAMARYGSDKPDTRFDMELIDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++     EF+VF   L      +           +R   D++ ++    G  GLA++   
Sbjct: 302 SDTVKEVEFKVFQMALENGGVVKALNAKGAADRYSRKDMDQLGQYVGQFGAKGLAWLKVE 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK +    TEAI    D + GD   F A       +     R  + +
Sbjct: 362 ED-----GLKGPIAKFMGEA-TEAIIKATDAKPGDLLMFGADKSEIVAAALGAIRTRLGK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG+I+ + F F W+ D+P +E++EEE +   AH+PFTMP+     L   D   + A  Y
Sbjct: 416 ELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAEAY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  E+  +    +G +KE +E +FG L  A   G PPHGGIA G
Sbjct: 476 DIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQMEEQFGFLLTALDYGFPPHGGIALG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR  MLL G  N+REV  FP +    D++  +PS VS  QL EL + + 
Sbjct: 536 LDRFAMLLAGEDNIREVIAFPKNGKAADVMSDAPSMVSPLQLFELNIDVT 585


>gi|297158885|gb|ADI08597.1| aspartyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 616

 Score =  612 bits (1579), Expect = e-173,   Method: Composition-based stats.
 Identities = 292/597 (48%), Positives = 397/597 (66%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  +DV + VRLSGW+H  R  GGI+F+D+RDHYG+ Q+V  PD+   +
Sbjct: 1   MHRYRSHTCGELRAADVDTDVRLSGWLHNRRNLGGILFIDLRDHYGLVQLVVRPDTPAND 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              S+  E V+ +DG V++R AE +N ++ TG+IE+    +E+L  A+ LP  VF E   
Sbjct: 61  ALSSISKETVVRVDGRVIARGAENVNPDLPTGEIEVEVTDVEVLGGADPLPFTVFPEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I+++R +M A+ F E +TPIL+A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVISAIRQKMTAQGFNELATPILSATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLHAGKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E V+  +FEEF  G  V++ F R+ + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQVIEKVMTELFEEFGGGRHVTSPFPRVPFREAMLKYGSDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+  F  S F+ F+            A+P       R F D+M E+A  QG  GLA++ 
Sbjct: 301 DVSHVFADSGFKAFA-----GKHVRALAVPDT-ADQPRKFFDQMGEFAVEQGAKGLAWVR 354

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+AK L   + E +   ++ + G + FF AG+  +        R   
Sbjct: 355 IGEDA----KLTGPIAKFLTDEDVEKLIAEVEGKPGTAIFFGAGEFDEVSKIMGAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G    N F FCWI+DFP +E NE+  +I+F+HNPF+MPQGG+E+L+  D L I A+
Sbjct: 411 ARRAGHFEENVFRFCWIVDFPMFERNEDTGQIEFSHNPFSMPQGGLEALRTKDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  +VM QAF   G S+E VE  FGG+ RAF  G PPHGGIA
Sbjct: 471 QYDIVCNGVELSSGAIRNHEPDVMYQAFEIAGYSREEVEREFGGMLRAFHFGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRIVMLL    N+RE   FP++ N  DLLMG+PS V   +LREL L I +   K
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLLMGAPSEVDEARLRELHLSIRKPQIK 587


>gi|313623669|gb|EFR93823.1| aspartyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 591

 Score =  612 bits (1578), Expect = e-173,   Method: Composition-based stats.
 Identities = 228/597 (38%), Positives = 336/597 (56%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNETHIGQNVILHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +    
Sbjct: 60  LEIADSVRNEFVVTIKGKVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +++I    E++L  V +E  N       F R+ Y +A+ R+G+DKPD+R  + 
Sbjct: 239 LETSFLTKEEIQAITEDMLVDVVKEAKNITI-EKPFPRMTYKEAMDRFGSDKPDIRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + NV+E     +F+VF   +      +     A     +R   D +  +  + G  GLA+
Sbjct: 298 LQNVSEVVKDVDFKVFQSAIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E+G +   GP+AK         ++  L  +DGD   F A       +     RN
Sbjct: 358 LKV---EAGELK--GPIAKFFPEDKAAELQAALQAEDGDLLLFAADKADIVAASLGALRN 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++L +IN +   F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + 
Sbjct: 413 KLGKDLDLINEDELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVM 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGG
Sbjct: 473 AEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMEALEYGTPPHGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 533 IALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSAAQLAELKLETVKKE 589


>gi|167758800|ref|ZP_02430927.1| hypothetical protein CLOSCI_01142 [Clostridium scindens ATCC 35704]
 gi|167663540|gb|EDS07670.1| hypothetical protein CLOSCI_01142 [Clostridium scindens ATCC 35704]
          Length = 597

 Score =  612 bits (1578), Expect = e-173,   Method: Composition-based stats.
 Identities = 234/594 (39%), Positives = 345/594 (58%), Gaps = 11/594 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFE 60
            RTH CG+L +++ G  V + GWV + R  GG++F+D+RD  GI QVV      D+A  E
Sbjct: 9   KRTHRCGELSIANAGETVTIMGWVQKNRNKGGLVFIDVRDRSGIIQVVFEEGSTDAALIE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ I G V  RS   +N N+ TG+IE+   ++ ILS AE  P P+    + 
Sbjct: 69  KAARLRSEYVIAIAGTVSKRSG-AVNENLATGEIEVIPTELRILSEAETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  L +N++ R+R+    R  +  E F+E  TPIL  S+PEGARD+
Sbjct: 128 KEELRLKYRYLDLRRPDLQRNLLLRSRVATLTRQFLSEEGFLEIETPILGKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FY LPQ+PQ +KQLLM SG DRYFQIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGQFYGLPQSPQLFKQLLMCSGCDRYFQIAKCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E +L  +F++      V+    R+ + +A+ RYG+DKPD R  + + 
Sbjct: 247 LSFVDVDDVIDVNERLLAKLFKDVLGVE-VALPIPRMTWQEAMDRYGSDKPDTRFGMELT 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VTE     EF VF   +             +GG   R   D++ ++A+  G  GLAYI 
Sbjct: 306 DVTEVVKDCEFVVFKGAIENGGTVRGINAKGQGG-MARKKIDKLVDFAKGFGAKGLAYIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +  E GNV      AK +      A+   ++ + GD   F A             R  +
Sbjct: 365 IQ--EDGNVK--SSFAKFMTEAQMNALIRAMNGEAGDLLLFAADKNKVVWDVLGSLRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++ ++N + ++F WI +FP  EW+EE+ +    H+PFTMP     +   +D   ++A 
Sbjct: 421 ARQMELLNKDEYKFLWITEFPLLEWSEEQNRYVAMHHPFTMPMEEDLNYLESDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+  NG EI  G +R    +V  + F  +G +KE  + +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDITLNGNEIGGGSVRIFQDDVQERMFEALGFTKEQAQEQFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+VML+    ++R+V  FP  ++   L+  +P+ V  +QL ELGL + E 
Sbjct: 541 YGLDRLVMLMAKEDSIRDVMAFPKVKDASCLMTAAPNLVDTKQLDELGLALKEE 594


>gi|159037436|ref|YP_001536689.1| aspartyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|189082137|sp|A8LXY1|SYD_SALAI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157916271|gb|ABV97698.1| aspartyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 604

 Score =  612 bits (1578), Expect = e-173,   Method: Composition-based stats.
 Identities = 229/601 (38%), Positives = 339/601 (56%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  +D G+ V L+GWV R R HGG+IF+D+RD  G+ QVV        E A  
Sbjct: 3   RTHDAGSLRATDAGTTVTLAGWVARRRDHGGVIFVDLRDGSGVAQVVLR-----EEDAHV 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + I G V  R     N  + TG++E++A ++E+LS A  LPLPV  + E  + I
Sbjct: 58  LRNEYCVRITGEVTRRPEGNENPELATGEVEVTADELEVLSEAAPLPLPVDDQIEAGDDI 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR      +  R+R     R  +   +F+E  TP LT S+PEGARDFLVP 
Sbjct: 118 RLRYRYLDLRRSGPANALRLRSRANQIARTVLHERDFLEIETPTLTRSTPEGARDFLVPV 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G++YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 178 RLQPGTWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +DD+++  E ++  ++ + +     +    RI + DA+ RYG+DKPDLR  + +  +T+
Sbjct: 237 TEDDVIDLGEAIVSRLWRQLAGHQI-TRPIPRITWHDAMARYGSDKPDLRYGVELTELTD 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +   + FRVF+  +          +   G   +R   D   +WA+++G  GLAY+   + 
Sbjct: 296 YLRGTRFRVFAGAIEAGGYV-GAVVMPGGAAQSRKELDGWQDWAKARGAKGLAYV---VL 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC-SFAADARNHIAQE 423
           ++      GPVAK+L+  +   +   +  + GD+ FF AG   +        AR  IA+ 
Sbjct: 352 DAETGEARGPVAKNLSAEHLAGLADAVGAKPGDAIFFAAGAESRAAQELLGAARVEIARR 411

Query: 424 LGIINCNCFEFCWIMDFPFYEW--NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             +++ + + FCW++D P +E   + EE      H+PFT P                A+ 
Sbjct: 412 ANLVDESAWAFCWVVDAPMFERVSDSEEGGWTAVHHPFTAPNAEWVDRFEEAPDRALAYA 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+VCNG EI  G IR H  +V  + F  +GI+ E   ++FG L  AF+ G PPHGGIA 
Sbjct: 472 YDIVCNGNEIGGGSIRIHRGDVQQRVFDLLGITPEQARDKFGFLLEAFKYGPPPHGGIAL 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKI 601
           G DRI MLL GA ++REV  FP ++   D L  +P+ ++  Q  E G+     P+   + 
Sbjct: 532 GWDRICMLLAGADSIREVIAFPKTRGGFDPLTSAPTPITAAQRLEAGVDARPKPEARAQA 591

Query: 602 S 602
            
Sbjct: 592 G 592


>gi|308069761|ref|YP_003871366.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase) [Paenibacillus
           polymyxa E681]
 gi|305859040|gb|ADM70828.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 589

 Score =  612 bits (1578), Expect = e-173,   Method: Composition-based stats.
 Identities = 278/593 (46%), Positives = 393/593 (66%), Gaps = 12/593 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG+L    VG  VR++GW+  +R HGG+IF+D+RDHYG+TQ+V + ++   +
Sbjct: 1   MHSYRTHNCGELDQKHVGEVVRIAGWIKNMRDHGGVIFIDLRDHYGVTQIVVSDNNELKD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGERE 119
               +  E  + + G V +RS  TI+  + TG IEL+A +I++L      LP  V    E
Sbjct: 61  FVSKISRESTISVTGTVCNRSENTISPTMKTGHIELAANEIKVLGKVVNPLPFEVSLANE 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYRFLDLR + +H NI+ R+++I S+R +MI  NF+E  TPILT+SSPEGARD
Sbjct: 121 AREDLRLKYRFLDLRNEKIHNNIILRSKVIQSIRRKMIDLNFLEIQTPILTSSSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 YLVPSRVHPGQFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDL 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+F  Q+D+ N +EN+L  VF EF+N    S  F RI Y +A+ +YG+DKPDLRNP+I+
Sbjct: 241 EMAFATQEDVFNVVENMLYEVFSEFTNFKI-SKPFTRIPYQEAMLKYGSDKPDLRNPLII 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           H+VTE F  ++F+VF      N    V A+P  G    R+F D +  +A   G  GL++I
Sbjct: 300 HDVTELFTETDFKVFK-----NKTIRVIAVPGCG-AQPRSFYDDIVNFAVEAGAKGLSWI 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  D    ++  G +AK ++      +        G + FF A         A   RN 
Sbjct: 354 KFNDD----MSLSGSIAKFISEEVKNQLIHVTQASSGCALFFAADQLKNVEKIAGAVRNQ 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + + L ++  + ++FCWI+DFP +E + +  KI F+HNPF+MPQGGM++L   + L I A
Sbjct: 410 LGKRLDLLEKDIYKFCWIVDFPMFELDPDTHKIGFSHNPFSMPQGGMDALLNMNPLDILA 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG +RNH +E+M++AF   G +   ++++F  L+ AFQ G PPH GI
Sbjct: 470 YQYDIVCNGIELSSGAVRNHDTEIMVKAFEIAGYTYGDIKSKFPALFNAFQFGPPPHAGI 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A GIDRIVM++    N+REV  FPM+    DLLMG+PS V+ +QLR++ +++V
Sbjct: 530 APGIDRIVMIIANESNIREVIAFPMNSKAQDLLMGAPSEVTEKQLRDVHIKLV 582


>gi|254478006|ref|ZP_05091390.1| aspartyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
 gi|214036010|gb|EEB76700.1| aspartyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
          Length = 613

 Score =  612 bits (1578), Expect = e-173,   Method: Composition-based stats.
 Identities = 235/589 (39%), Positives = 351/589 (59%), Gaps = 10/589 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTH CG+L V DVG  V + GWV+  R HGG++F+D+RD  GI Q+V +       FE 
Sbjct: 31  KRTHMCGELTVEDVGKSVVVMGWVNSRRDHGGLVFIDLRDRTGIVQIVFSEQVSKEAFEK 90

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +SVRSE+VL ++G V+ R  E +N  I TG+IE+ A+ ++ILS +E  P P+       
Sbjct: 91  VQSVRSEYVLAVEGEVVKRLPENVNPKIPTGEIEIYAKNLKILSKSETPPFPIEDRSNVS 150

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR ++ +N++ R ++  ++R  +    FIE  TP+L  S+PEGARD+L
Sbjct: 151 EAVRLKYRYLDLRRPSMQRNLITRFKLTQAVREFLNDNGFIEIETPMLIKSTPEGARDYL 210

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM +GFDRY+QIA C RDED R+DR P EF Q+D+EM
Sbjct: 211 VPSRIYPGKFYALPQSPQIFKQLLMIAGFDRYYQIARCLRDEDLRADRQP-EFTQIDIEM 269

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE +D+L+  E +++ VF++  + + +   F R+ Y +A+ R+GTDKPDLR  + + +
Sbjct: 270 SFVEVEDVLDINERMIKHVFKKVLDVD-LDIPFRRLTYQEAMERFGTDKPDLRFGMELKD 328

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    SEF VF   L          +        R   D + E+A++ G  GL ++  
Sbjct: 329 LSDILRESEFNVFKNALKNGGSIRGINVK-GAALMTRKQLDELVEFAKNFGAKGLLWMQV 387

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E        P  K L       I  RL+ + GD    +A             R  +A
Sbjct: 388 LEGE-----VKSPATKFLTEGELNKILERLEAEVGDLLLIVADKDEVVFDTLGHLRVEMA 442

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   +I+ + +EF W++DFP  E++EEE++    H+PFT P+     L   + L +KA  
Sbjct: 443 KRFNLIDESKYEFVWVVDFPLLEYDEEERRYVAKHHPFTSPKDEDIDLLEKEPLKVKAKL 502

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD++ NG EI  GGIR   +E+ ++ F  +G S+E     FG L  AF+ G PPHGGIA 
Sbjct: 503 YDIILNGIEIGGGGIRISDTELQMRMFKVLGFSEEEAWKEFGFLMEAFKYGAPPHGGIAY 562

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR+ M++ G+  +R+V  FP +QN   L+  +PS VS +QL+EL ++
Sbjct: 563 GLDRLAMIMTGSDTIRDVIAFPKTQNAVCLMSDAPSRVSEKQLKELHIK 611


>gi|152990518|ref|YP_001356240.1| aspartyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|151422379|dbj|BAF69883.1| aspartyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 589

 Score =  612 bits (1578), Expect = e-173,   Method: Composition-based stats.
 Identities = 241/596 (40%), Positives = 340/596 (57%), Gaps = 16/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  C +L   D+G  V L GW +  R HGG+IF+D+RD  G+ Q+V +P       +IA
Sbjct: 2   RTDYCAELNEKDIGKEVVLCGWANSYRDHGGVIFIDLRDKTGLVQLVCDPADSKEAHKIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL   G V  R     N  + TG+IE+   ++ I + +E LP    G+    E
Sbjct: 62  TRVRDEYVLIAKGKVRLRGEGLENPKLKTGKIEVVVDELVIENESEPLPFL-IGDNTVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLR          R+++  + R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 121 EIRLKYRYLDLRTKEAFNTFELRSKVAIAARNFLDKNGFLEVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRLYPGEFYALPQSPQLFKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  +D+++   E +++ +FE  + G  V     R+ Y +A+ +YG+DKPDLR  + + +V
Sbjct: 240 FCTEDEVIEVAEGLIKSIFE--AAGVEVKTPIRRMPYKEAMEKYGSDKPDLRFGLELVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIF 360
            + F ++E +VF  I        + A+P KGG     R   D +  +    G  GLA++ 
Sbjct: 298 IDIFENTELKVFRDIAQYKKLNRIKALPVKGGADALTRKDIDALTSFVAKFGAKGLAWVK 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K L+    +A+  R  ++ GD  FF AG       +    RN +
Sbjct: 358 VKEDGD----LQGPIVKFLSDEEKKALVDRCAVETGDLIFFGAGPKKIVLDYMGRLRNEV 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++LG+I+ + FEF WI+DFP +E  E E KI   H+PFTMP+     +   D  ++ + 
Sbjct: 414 AKKLGLIDHDRFEFVWIVDFPMFEIEEGEVKIKALHHPFTMPKN----IDTEDYEAMTSQ 469

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  E+  + F  +GI  E  + +FG L  A + G PPHGG A
Sbjct: 470 AYDIVLNGVELGGGSIRIHKPEIQKKIFEILGIGDEEAKEKFGFLLDALKFGAPPHGGFA 529

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G DR+VMLL    N+R+V  FP +Q    LL  +PS V  EQL+EL +RI E  K
Sbjct: 530 LGFDRLVMLLTKRDNIRDVIAFPKTQKAQCLLTQAPSKVDPEQLKELHIRIREPKK 585


>gi|258512004|ref|YP_003185438.1| aspartyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478730|gb|ACV59049.1| aspartyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 600

 Score =  612 bits (1578), Expect = e-173,   Method: Composition-based stats.
 Identities = 234/597 (39%), Positives = 344/597 (57%), Gaps = 12/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSAC 58
           R+RTH   D       S VRL+GWV R R  G ++F+D+RD  GI Q+V +         
Sbjct: 11  RWRTHWVADTVRVQPKSEVRLAGWVQRRRDLGSVVFVDLRDRTGIVQLVFDRARGTSDEA 70

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E+A  +RSE+V+ +DG V  R  +T+N  I TG+IE+      I S A+  P  +    
Sbjct: 71  MEVADRLRSEYVIVVDGTVEKRDPDTVNPKIETGEIEVVVTSARIESAAKTPPFYIEDGI 130

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E +R +YR+LDLRR  + +    R + I + R  +    F+E  TP+LT S+PEGAR
Sbjct: 131 QVEEPVRLRYRYLDLRRPEMQRIFALRHQAIRAFRRYLDDHGFLEIETPMLTKSTPEGAR 190

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR+  G FYALPQ+PQ +KQLLM +GF+RY+Q+A CFRDED R+DR P EF QLD
Sbjct: 191 DYLVPSRLQPGEFYALPQSPQIFKQLLMVAGFERYYQVARCFRDEDLRADRQP-EFTQLD 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +D++++ ME ++  VF+E ++   V   FLR+ Y +A+ +YG+DKPDLR  + 
Sbjct: 250 IETSFLPKDELMSMMEEMMASVFKEVADIE-VPRPFLRLPYQEAMDKYGSDKPDLRFGME 308

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M ++ + F  + FRVF+ +L      +    P      +R   D +  + +  G  GLAY
Sbjct: 309 MADLADLFEGTSFRVFADVLEKGGVIKALVAP-GCASYSRKQTDDLVAFVKPYGLGGLAY 367

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  + D          +AK     +   I  R   + GD     AG            R 
Sbjct: 368 VAVQED-----GFKSSIAKFFTDDDFRRIADRAGAKVGDLVLIGAGPRETVLPAMGALRL 422

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           H+ QELG+I+ + + F W+ DFP   W+EEEK+    H+PFTMP+     L   D   ++
Sbjct: 423 HLGQELGLIDESQYRFLWVTDFPLLSWDEEEKRWVAEHHPFTMPREEDIPLLDTDPGRVR 482

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+EI  G +R +  +V  + F+ +G S E  + +FG L  AF+ G PPHGG
Sbjct: 483 AQAYDMVLNGYEIGGGSMRIYRRDVQEKMFAALGFSPEEAQEKFGFLLNAFEYGTPPHGG 542

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DR++MLL GAK++R+V  FP + +  DL++G+PS VS  QL  L LR+ +  
Sbjct: 543 IAFGLDRMIMLLTGAKSLRDVIAFPKTASGTDLMVGAPSEVSEAQLEVLHLRVRKTK 599


>gi|312969907|ref|ZP_07784090.1| aspartyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|310338192|gb|EFQ03281.1| aspartyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|320198060|gb|EFW72668.1| aspartyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323152645|gb|EFZ38921.1| aspartyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323158649|gb|EFZ44663.1| aspartyl-tRNA synthetase [Escherichia coli E128010]
 gi|323180663|gb|EFZ66208.1| aspartyl-tRNA synthetase [Escherichia coli 1180]
 gi|323186358|gb|EFZ71708.1| aspartyl-tRNA synthetase [Escherichia coli 1357]
          Length = 577

 Score =  612 bits (1578), Expect = e-173,   Method: Composition-based stats.
 Identities = 215/580 (37%), Positives = 322/580 (55%), Gaps = 7/580 (1%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGL 76
           G  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G 
Sbjct: 2   GQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGT 61

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR 
Sbjct: 62  VRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRP 119

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ
Sbjct: 120 EMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQ 179

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME +
Sbjct: 180 SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEAL 238

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+ 
Sbjct: 239 VRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAG 296

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
             +   G         G    R   D    + +  G  GLAYI       G      PVA
Sbjct: 297 PANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVA 356

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K LN    EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W
Sbjct: 357 KFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLW 416

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           ++DFP +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +
Sbjct: 417 VIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSV 475

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+
Sbjct: 476 RIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNI 535

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 RDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 575


>gi|67459530|ref|YP_247154.1| aspartyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536063|sp|Q4UKE2|SYD_RICFE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|67005063|gb|AAY61989.1| Aspartyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 600

 Score =  612 bits (1578), Expect = e-173,   Method: Composition-based stats.
 Identities = 305/605 (50%), Positives = 412/605 (68%), Gaps = 10/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           MH+YRTH+C +L +SDV   V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 1   MHKYRTHNCNELQISDVRKEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNQQLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G +++RS +TIN  + TG IE+ A +  + S A+ LP  +  E++
Sbjct: 61  EDASRLRYESVITVRGTIVARSNDTINDTLPTGHIEVLAGEFIVESAADTLPFVINTEKD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M    F E  TPILTASSPEGARD
Sbjct: 121 APEETRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTGRGFTEFQTPILTASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+DI +T+E V+  +F +F+        F+RI Y++++ +YG+DKPDLRNPII+
Sbjct: 241 EMSFVTQEDIFSTIEPVMYDLFTKFTAKKVSETPFVRIPYNESMLKYGSDKPDLRNPIII 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTE F  S+F +F + +           P K     R+F D+M E+A S+G  GL YI
Sbjct: 301 ADVTEIFRDSDFTIFRENIKKGSIVRAIPAP-KAAALPRSFFDKMIEFAISEGAGGLGYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +    S      GPVAK L+    E+++    + +GD+ FF +    K    A   R  
Sbjct: 360 QF----SETGEAKGPVAKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRIR 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDLL 475
           + +EL ++  +CF+FCWI DFPFYE NE+  KIDF+HNPF+MPQGG+E+L+      +LL
Sbjct: 416 LGEELDLLEKDCFKFCWITDFPFYELNEDTGKIDFSHNPFSMPQGGLEALEQAKTTEELL 475

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G PP
Sbjct: 476 ELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSMAGYSEEEVDKRFGGMIRAFKFGAPP 535

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  + 
Sbjct: 536 HGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPSI 595

Query: 596 KKILK 600
            K +K
Sbjct: 596 LKNMK 600


>gi|325496991|gb|EGC94850.1| aspartyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 577

 Score =  612 bits (1578), Expect = e-173,   Method: Composition-based stats.
 Identities = 215/580 (37%), Positives = 322/580 (55%), Gaps = 7/580 (1%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGL 76
           G  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G 
Sbjct: 2   GQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGT 61

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR 
Sbjct: 62  VRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRP 119

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ
Sbjct: 120 EMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQ 179

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME +
Sbjct: 180 SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEAL 238

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+ 
Sbjct: 239 VRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAG 296

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
             +   G         G    R   D    + +  G  GLAYI       G      PVA
Sbjct: 297 PANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVA 356

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K LN    EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W
Sbjct: 357 KFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLW 416

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           ++DFP +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +
Sbjct: 417 VIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSV 475

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+
Sbjct: 476 RIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNI 535

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 RDVIAFPKTTAAACLMTEAPSFANPTALSELSIQVVKKAE 575


>gi|18310915|ref|NP_562849.1| aspartyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|110801288|ref|YP_696612.1| aspartyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168214147|ref|ZP_02639772.1| aspartyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|168215558|ref|ZP_02641183.1| aspartyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|169343591|ref|ZP_02864590.1| aspartyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|24212407|sp|Q8XJ28|SYD_CLOPE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123344612|sp|Q0TP28|SYD_CLOP1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|18145597|dbj|BAB81639.1| aspartate-tRNA ligase [Clostridium perfringens str. 13]
 gi|110675935|gb|ABG84922.1| aspartyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|169298151|gb|EDS80241.1| aspartyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|170714389|gb|EDT26571.1| aspartyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|182382184|gb|EDT79663.1| aspartyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 597

 Score =  612 bits (1578), Expect = e-173,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 339/595 (56%), Gaps = 13/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            R   CGD   S +G  V + GWV R R  GG+ F+D+RD  GI QVV N D      E 
Sbjct: 9   KRNIMCGDARESHIGQKVTVMGWVQRNRNLGGLQFIDLRDREGILQVVFNDDLGEEILEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AKS+R E+ + + G ++ R  E++N N+ TG +EL A++++ILS ++  P+ +  + +  
Sbjct: 69  AKSIRPEYCIAVTGEIVKR--ESVNPNMPTGMVELKAEELKILSESDTPPIYIKEDLDAA 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           ESIR KYR+LDLRR  +      R +   ++R  +    F+E  TPILT S+PEGARD+L
Sbjct: 127 ESIRLKYRYLDLRRPDMQNIFKIRHKTTKAIRDYLDQNGFLEMETPILTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R++R P EF Q+D+EM
Sbjct: 187 VPSRNYPGMFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRANRQP-EFTQVDLEM 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQDD++   E +++ VF+E    + V     R+ + DA+ +YG+DKPDLR  + + N
Sbjct: 246 SFVEQDDVMALNEGLIKHVFKEVLGVD-VKTPIKRMTFKDAMEKYGSDKPDLRFGMEITN 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++      F+VF+  ++         +   G    R   DR+ E+ ++    GLA+I  
Sbjct: 305 LSDVVKECGFKVFTDAVANGGSVRGLCL-EGGASMGRKDIDRLGEFVKTFKAKGLAWIQL 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +           P+AK  +      I   +  + GD    +A           + R  ++
Sbjct: 364 K-----EEGVKSPIAKFFSEEELNKIIETMGAKTGDLILIVADKNSVVLKALGELRLELS 418

Query: 422 QELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           ++  ++ + + F F WI +F   E++EEE +   AH+PFTMP          D   ++A 
Sbjct: 419 RKFDLVKDKSEFNFTWITEFDLLEYDEEEGRYFAAHHPFTMPMDEDIKYLDTDPGRVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H +++  + F  +G ++E    RFG L  AF+ G PPHGG+A
Sbjct: 479 AYDLVLNGEELGGGSIRIHDTKLQEKMFEVLGFTQESAWERFGFLLEAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+DR++M L G +N+++V  FP +QN    L  +P+ V  EQL+ELG+  ++  
Sbjct: 539 FGLDRMIMFLAGTENIKDVITFPKNQNAFCYLTEAPNIVDEEQLKELGIETIKKE 593


>gi|160932387|ref|ZP_02079777.1| hypothetical protein CLOLEP_01222 [Clostridium leptum DSM 753]
 gi|156868346|gb|EDO61718.1| hypothetical protein CLOLEP_01222 [Clostridium leptum DSM 753]
          Length = 598

 Score =  612 bits (1578), Expect = e-173,   Method: Composition-based stats.
 Identities = 228/596 (38%), Positives = 338/596 (56%), Gaps = 12/596 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RTH CG+  +SDVG  V + GW  R R  G +IF+D+RD  GI Q+  +   D   F  
Sbjct: 9   KRTHYCGEPRLSDVGKEVVVCGWAQRQRDLGQLIFIDLRDRTGIIQLAFDDHTDKEIFGK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  VR+E+VL   G+V  RS++  N  I TG++E+    + +LS +E  P  +  + +  
Sbjct: 69  AFGVRAEFVLAAKGVVRERSSK--NKEIPTGEVEIEVTDLRVLSKSETPPFEITEDSKVK 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  +   I+ R +I+   R       F+E  TPIL  S+PEGARD+L
Sbjct: 127 EELRLKYRYLDLRRPDVQDKIIARHKIVKIARDYFDQNGFVEVETPILIKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  GSF+ALPQ+PQ YKQL M +GFDRY QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 187 VPSRVFPGSFFALPQSPQLYKQLTMLAGFDRYMQIARCFRDEDLRADRQP-EFTQIDLEM 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++++DI++  E  ++ V++E  +       F R+ Y + + R+G+DKPDLR    + N
Sbjct: 246 SFIDEEDIMSMAEGFVKTVYKEVLDVEI-QTPFPRMTYAEGMERFGSDKPDLRFGYELKN 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE    +EFRVF+  +S         +   G    R   D++ EW ++ G  GLA+   
Sbjct: 305 LTEVLKGTEFRVFAGAVSAGGSVRGINVK-GGACYTRKEIDKLAEWVKAYGAKGLAWTKL 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHI 420
             D S + +      K L       +R  L+ ++GD  F + +  P          R   
Sbjct: 364 NQDGSSSSSY----EKFLKEEEAAGVRSALEAENGDLLFLVASDKPQVVFDTLGALRCEC 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++GII+ +     WI DFP +E++EEE +    H+PFT P          +  +++A 
Sbjct: 420 ARQMGIIDESRPNLLWITDFPLFEYDEEEGRFVAKHHPFTHPNDEDLEQLETNPGAVRAR 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR +   +  + F  +G ++E  + RFG L  AF+ G PPHGG+A
Sbjct: 480 AYDMVLNGNEVGGGSIRINDPALQQRMFKALGFTQEEAQERFGFLIDAFRYGAPPHGGMA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VML+LG  ++R+V  +P   N  +L+  SP+ V  +QL ELG+ I    +
Sbjct: 540 FGLDRLVMLMLGCDSIRDVIAYPKVANSGELMTASPAPVDQKQLDELGISINLQEE 595


>gi|56750249|ref|YP_170950.1| aspartyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|62287522|sp|Q5N5I8|SYD_SYNP6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56685208|dbj|BAD78430.1| aspartyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
          Length = 599

 Score =  612 bits (1578), Expect = e-173,   Method: Composition-based stats.
 Identities = 234/600 (39%), Positives = 347/600 (57%), Gaps = 17/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L    VG+ V L GWV R R HGG+IF+D+RD  G  Q+V++P+     +  A
Sbjct: 2   RTHYCGELRAEQVGTSVTLYGWVDRRRDHGGVIFVDLRDRTGTVQIVSDPERTPESYHQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           + +R+E+V+ I G V  R AE++N  + TG++E+ A +IEIL+         +    E  
Sbjct: 62  EGLRNEYVVKITGRVSGRPAESLNPKLPTGEVEIYADRIEILNAVRRQLPFQVSSADEET 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R +YR+LDLRRD +++N+  R +++ ++R  +   E FIE  TP+LT S+PEGAR
Sbjct: 122 VREDLRLRYRYLDLRRDRMNRNLQLRHQVVKAIRRFLEDEEQFIEIETPVLTKSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G ++ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGEWFALPQSPQLFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ Q++I++  E ++  +F+       +   F R+ Y +A+ RYG+D+PD R  + 
Sbjct: 241 MEMSFLSQEEIIDLNERLIAHIFKTVKGIE-LPRPFPRLTYAEAMDRYGSDRPDTRFGLK 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V++      F+VFS  +      ++  IP      +         + + A   G  G
Sbjct: 300 LVDVSDVVADMGFKVFSGAVKSGGKVKILPIPDGNDRISNVRIKPGGDIFKEATEAGAAG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI  R+ E+G +  +G +  +L+      I  R   Q G    F AG           
Sbjct: 360 LAYI--RVRENGEIDTIGAIKDNLSDEQKAEILRRTQAQPGTLLLFGAGSTDIVNKSLDR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  + +ELG+I+       W++DFP  EWN +EK+ +  H+PFT P          DL 
Sbjct: 418 VRQFLGKELGLIDPEALNLLWVVDFPMVEWNADEKRYEALHHPFTAPNPQDL----EDLT 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YD+V NG EI  G +R +  ++  + F  +G+S E  + +FG L  AF  G PP
Sbjct: 474 TARAQAYDIVLNGLEIGGGSLRIYQRDIQERVFETIGLSHEEAQAKFGFLLEAFDFGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL G +++R+   FP +Q    LL  +P+ VS  QL+EL +     P
Sbjct: 534 HGGIAYGLDRLVMLLTGEESIRDAIAFPKTQQARCLLTEAPADVSDRQLKELYVASTWQP 593


>gi|328883608|emb|CCA56847.1| Aspartyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 602

 Score =  612 bits (1577), Expect = e-173,   Method: Composition-based stats.
 Identities = 297/603 (49%), Positives = 405/603 (67%), Gaps = 11/603 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                  E V+ IDG V+SR AE +NA++ TG+IE+    +E+L  A+++P  +  +   
Sbjct: 61  ALDKQTKESVVRIDGTVVSRGAENVNADLPTGEIEVEVGAVEVLGAAQQIPFTINADDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF  G  V++ F RI + +++ +YG DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGGGRHVTSPFPRIPFRESMLKYGNDKPDLRTSLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F  SEF+ F+            A+P  G    R F D + ++A S G  GLA++ 
Sbjct: 301 DITDVFEASEFKAFA-----GKHVRALAVPNTGDQ-PRKFFDGLGDFAVSLGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E   +   GP+AK L   N + +  RL ++ G + FF AGD  +        R   
Sbjct: 354 -RVGEGNALT--GPIAKFLTEENVKVLTERLGLEPGHAVFFGAGDFDEVSKIMGPVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G    N F F WI+DFP YE +EE  KIDF+HNPF+MPQGG+E+L+  D L I  +
Sbjct: 411 AKRAGQFEENVFRFAWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLEALETQDPLDILGW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH   +M +AF   G S+E VE  F G+ RAFQ G PPHGGIA
Sbjct: 471 QYDIVCNGIELSSGAIRNHEPAIMFKAFEIAGYSRETVETEFAGMLRAFQFGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN-PKKIL 599
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++ +   KK +
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDEARLRELNIQLRKPVEKKTV 590

Query: 600 KIS 602
            I+
Sbjct: 591 DIT 593


>gi|302866788|ref|YP_003835425.1| aspartyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302569647|gb|ADL45849.1| aspartyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 601

 Score =  612 bits (1577), Expect = e-173,   Method: Composition-based stats.
 Identities = 229/592 (38%), Positives = 343/592 (57%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G L  +D GS V L+GWV R R HGG+IF+D+RD  G+ QVV        E A +
Sbjct: 3   RTHNAGSLRAADAGSTVTLAGWVARRRDHGGVIFVDLRDASGVVQVVFR-----EEDAHA 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N ++ TG++E++A ++E+LS A  LPLPV  + E  + I
Sbjct: 58  LRNEFCVKVTGEVTRRPEGNENPDLPTGEVEVTASELEVLSEAAPLPLPVDDQIEAGDDI 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR    K +  R+R     R  +   +F+E  TP LT S+PEGARDFLVP 
Sbjct: 118 RLKYRYLDLRRGGPAKAMRLRSRANQIARGVLHERDFLEIETPTLTRSTPEGARDFLVPV 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 178 RLQPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +DD+++  E ++  ++++ +     +    RI + DA+ RYG+DKPDLR  + +  +T+
Sbjct: 237 TEDDVIDLGEAIVSALWKDLAGYEI-ARPIPRITWHDAMSRYGSDKPDLRYGVELTELTD 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +   +EFRVF+  +          +   G    R   D   +WA+++G  GLAY+   + 
Sbjct: 296 YLRGTEFRVFAGAIDAGGYV-GAVVMPGGASQTRKELDGWQDWAKARGARGLAYV---VL 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHIAQE 423
           ++      GPVAK+L+  +   +   +  + GD+ FF  + +  +       AR  IA+ 
Sbjct: 352 DAETGEARGPVAKNLSEAHLSGLADAVGAKPGDAVFFAASTNTREAQELLGAARIEIAKR 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             +I+ + + FCW++D P +E   +E      H+PFT P                A+ YD
Sbjct: 412 ANLIDESAWAFCWVVDAPMFERT-DEGGWTAVHHPFTSPNAEWVDRFEEAPDRALAYAYD 470

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +VCNG EI  G IR H  +V  + F  +GI+ +  +++FG L  AF+ G PPHGGIA G 
Sbjct: 471 IVCNGNEIGGGSIRIHRGDVQQRVFDLLGITADEAQDKFGFLLEAFKYGAPPHGGIAFGW 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL GA ++REV  FP ++   D L G+P+ ++ +Q  E G+      
Sbjct: 531 DRVCMLLAGADSIREVIAFPKTRGGFDPLTGAPTPITGQQRAEAGIDAKPKA 582


>gi|315503203|ref|YP_004082090.1| aspartyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315409822|gb|ADU07939.1| aspartyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 601

 Score =  612 bits (1577), Expect = e-173,   Method: Composition-based stats.
 Identities = 229/592 (38%), Positives = 343/592 (57%), Gaps = 13/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G L  +D GS V L+GWV R R HGG+IF+D+RD  G+ QVV        E A +
Sbjct: 3   RTHNAGSLRAADAGSTVTLAGWVARRRDHGGVIFVDLRDASGVVQVVFR-----EEDAHA 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N ++ TG++E++A ++E+LS A  LPLPV  + E  + I
Sbjct: 58  LRNEFCVKVTGEVTRRPEGNENPDLPTGEVEVTASELEVLSEAAPLPLPVDDQIEAGDDI 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR    K +  R+R     R  +   +F+E  TP LT S+PEGARDFLVP 
Sbjct: 118 RLKYRYLDLRRGGPAKAMRLRSRANQIARGVLHERDFLEIETPTLTRSTPEGARDFLVPV 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 178 RLQPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +DD+++  E ++  ++++ +     +    RI + DA+ RYG+DKPDLR  + +  +T+
Sbjct: 237 TEDDVIDLGEAIVSALWKDLAGYEI-ARPIPRITWHDAMSRYGSDKPDLRYGVELTELTD 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +   +EFRVF+  +          +   G    R   D   +WA+++G  GLAY+   + 
Sbjct: 296 YLRGTEFRVFAGAIDAGGYV-GAVVMPGGASQTRKELDGWQDWAKARGARGLAYV---VL 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHIAQE 423
           ++      GPVAK+L+  +   +   +  + GD+ FF  + +  +       AR  IA+ 
Sbjct: 352 DAETGEARGPVAKNLSEAHLSGLADAVGAKPGDAVFFAASTNTREAQELLGAARIEIAKR 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             +I+ + + FCW++D P +E   +E      H+PFT P                A+ YD
Sbjct: 412 ANLIDESAWAFCWVVDAPMFERT-DEGGWTAVHHPFTSPNAEWVDRFEEAPDRALAYAYD 470

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +VCNG EI  G IR H  +V  + F  +GI+ +  +++FG L  AF+ G PPHGGIA G 
Sbjct: 471 IVCNGNEIGGGSIRIHRGDVQQRVFDLLGITADEAQDKFGFLLEAFKYGAPPHGGIAFGW 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL GA ++REV  FP ++   D L G+P+ ++ +Q  E G+      
Sbjct: 531 DRVCMLLAGADSIREVIAFPKTRGGFDPLTGAPTPITGQQRAEAGIDAKPKA 582


>gi|315641700|ref|ZP_07896745.1| aspartate--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315482549|gb|EFU73083.1| aspartate--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 591

 Score =  612 bits (1577), Expect = e-173,   Method: Composition-based stats.
 Identities = 228/597 (38%), Positives = 335/597 (56%), Gaps = 11/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M + R+  CG +    +   V L GWV + R  GG+IF+D+RD  GI QVV NP      
Sbjct: 1   MEK-RSVYCGLVNEEWLDKRVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPATSEEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           + IA   RSE+V+ I G V+ RS E +N  + TG  E+ A +I IL+ A+  P P+  E 
Sbjct: 60  WAIADKCRSEYVIEISGTVIQRSPEAVNPKMQTGAYEVMADQITILNRAKTPPFPIEDEN 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  + IR KYR+LDLRR  + KN++ RT+   ++R  +   +F++  TP L  S+PEGAR
Sbjct: 120 QVGDDIRMKYRYLDLRRPQMTKNLLLRTKTTQAIRRYLDDNDFLDIETPYLAKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV+ G FYALPQ+PQ +KQLLMASG DRY+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVHPGHFYALPQSPQIFKQLLMASGMDRYYQIVRCFRDEDLRGDRQP-EFTQVD 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E +F+  ++I    E +++ V ++    + V+  F R+ + +A+ RYG+DKPD R  + 
Sbjct: 239 IETTFLTAEEIQTYTEGLIQKVMKDVKGID-VTLPFPRMTWQEAMNRYGSDKPDTRFEME 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +++E     +F+VF   +      +           +R   D++ ++    G  GLA+
Sbjct: 298 LIDLSETVKDIDFKVFQMAIENGGVVKALNAKGAADKYSRKDMDQLGQYVSQFGAKGLAW 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +    D        GP+AK      TEAI    + + GD   F A       +     R 
Sbjct: 358 LKVEED-----GLKGPIAKFFKEA-TEAIIAATNAEVGDLLMFGADSFEVVSATLGAVRT 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +ELG+I+   F + W++D+P +E++EE  +   AH+PFTMP+     L   D   + 
Sbjct: 412 RLGKELGLIDATKFNYLWVVDWPQFEYDEEAGRYVSAHHPFTMPKASDVELLATDPARVH 471

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R H  EV  Q F  +G S+  +  +FG L  A   G PPHGG
Sbjct: 472 AEAYDIVLNGYELGGGSLRIHTREVQEQMFETLGFSRREMTEQFGFLLEALDYGFPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DR  MLL G  N+REV  FP +    D +  +PSTVS  QL EL + +  + 
Sbjct: 532 IALGLDRFAMLLAGEDNIREVIAFPKNGRAIDPMSQAPSTVSPLQLFELNIDVTTSE 588


>gi|240143875|ref|ZP_04742476.1| aspartate--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257204136|gb|EEV02421.1| aspartate--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291535084|emb|CBL08196.1| aspartyl-tRNA synthetase [Roseburia intestinalis M50/1]
 gi|291539597|emb|CBL12708.1| aspartyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 597

 Score =  612 bits (1577), Expect = e-173,   Method: Composition-based stats.
 Identities = 220/583 (37%), Positives = 337/583 (57%), Gaps = 11/583 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFE 60
           +R+H C ++   ++G  V + GWV + R  G +IF+D+RD  GI Q+V N +S     +E
Sbjct: 9   HRSHRCTEVSNQNIGETVTVMGWVQKRRNLGSLIFIDLRDRSGILQLVFNEESVGKEGYE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ + G V  RSA  +N ++ TG IE+ A  I ILS AE  P  +    + 
Sbjct: 69  KAERLRSEYVIAVTGKVEKRSA-AVNESLKTGDIEVIATDIRILSEAETPPFQIEENSQT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + KN++ R+++   MR  M  E F+E  TP+L  S+PEGARD+
Sbjct: 128 KDEVRLKYRYLDLRRPDIQKNLMLRSKVAYLMRDFMAKEGFLEIETPMLCKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ YKQLLM SG+DRYFQIA CFRDED R+DR P EF Q DME
Sbjct: 188 LVPSRVHPGHFYALPQSPQLYKQLLMCSGYDRYFQIARCFRDEDLRADRQP-EFTQADME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           ++FV+ +D+L+  E +L+ +F+E    + V+    R+ + +A+ R+G+DKPD R  + + 
Sbjct: 247 LAFVDVEDVLDVNERLLKYIFKEAIGVD-VTLPLPRMPWQEAMDRFGSDKPDTRFGMELC 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++      F VF+  L             + G   R   D++ E+A+  G  GLAY+ 
Sbjct: 306 DVSKVVEGCGFSVFTGALENGGSVRGINAKGQAG-MPRKKIDKLVEFAKGYGAKGLAYLA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D           AK +     +A+   +  + GD   F A       +     R  +
Sbjct: 365 VNEDG----TYKSSFAKFMTEDELKALVSAMQGEPGDLLLFAADKNKIVWNVLGALRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +++ N + F W+ +FP  EW++EE +    H+PFTMP         +D  S++A 
Sbjct: 421 AKELDLLDPNQYNFLWVTEFPLLEWSDEENRFMAMHHPFTMPMEEDWDKIDSDPGSVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H  ++  + F  +G +KE    +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKERAHEQFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            G+DR+VM ++ A ++R+V  FP  ++   L+  +P  V  +Q
Sbjct: 541 YGLDRLVMHMVHADSIRDVIAFPKVKDASCLMTQAPGIVDKKQ 583


>gi|193214425|ref|YP_001995624.1| aspartyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193087902|gb|ACF13177.1| aspartyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 604

 Score =  612 bits (1577), Expect = e-173,   Method: Composition-based stats.
 Identities = 287/597 (48%), Positives = 399/597 (66%), Gaps = 8/597 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFE 60
           + YR+H CG L  ++V + V+LSGWVHRVR HGG+IF+D+RD+ G+ Q+V  P+    F 
Sbjct: 14  NPYRSHFCGKLTKAEVETSVKLSGWVHRVRDHGGLIFIDLRDYTGVCQLVLQPEREEIFS 73

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +  E V+ I G V+ RS ET+N ++ TG+IE+  + + I S AE +P  +  E   
Sbjct: 74  LAEHLHVESVITIVGEVIMRSPETVNPSLSTGEIEVVVESLTIESSAEPVPFQIADEGNT 133

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR+ L +NI+ R+++ + +R  +I   F E  TPILT SSPEGARD+
Sbjct: 134 SEELRLKYRFLDLRREHLRENILFRSKVTSEIRRFLIDGGFHEIQTPILTVSSPEGARDY 193

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GFD+YFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 194 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFDKYFQIAPCFRDEDARADRSPGEFYQLDME 253

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+ QDD+   +EN+ + + + F+  +     F RI + +++ +YGTDKPD+R P+ + 
Sbjct: 254 MSFITQDDLFVILENLFQHLTKTFTQKSIRQFPFPRIPFRESMDKYGTDKPDVRVPLEIQ 313

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++ FV S+F+VFS         +   +  KG   +R F D+    A+  G PGLAYI 
Sbjct: 314 DLSDFFVDSDFKVFSSNCKPGRCVKALVLKGKGNE-SRLFYDKAEAHAKEHGSPGLAYIQ 372

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           ++     N    GP+ K L     +A++ RL ++ GD  FF AG   K C      RN+ 
Sbjct: 373 FK-----NEGPKGPILKFLKEGELQALKERLGLEQGDVVFFGAGAWEKTCKIMGAMRNYF 427

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A  L  I+ N   FCWI+DFP YE+NE+EKKIDF+HNPF+MPQGGM++L   D L I A+
Sbjct: 428 A-PLYPIDKNELAFCWIVDFPMYEYNEDEKKIDFSHNPFSMPQGGMDALTQKDPLDILAY 486

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  E+M +AF   G  KE VE  FG +  AF+ G PPHGGIA
Sbjct: 487 QYDIVCNGIELSSGAIRNHKPEIMYKAFEIAGYGKEEVERSFGHMLNAFKHGAPPHGGIA 546

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VM+L   +N+REV  FPM+Q   DL+MG+P+ V+ +QL+EL + +    K+
Sbjct: 547 PGVDRLVMILRDEQNIREVIAFPMNQKAQDLMMGAPAEVAPKQLKELHISLNLPKKE 603


>gi|332364065|gb|EGJ41842.1| aspartate--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 584

 Score =  612 bits (1577), Expect = e-173,   Method: Composition-based stats.
 Identities = 229/597 (38%), Positives = 345/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   EI 
Sbjct: 1   MKRSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEIM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E +N  + TG +EL  + + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEYVIEVTGKVAAR--EQVNDKLATGSVELHVESLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD
Sbjct: 119 VNDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E    + VS  F R+ YDDA+  YG DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGID-VSLPFPRMKYDDAMALYGVDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G +A  GP+AK L  + T  +   L +++ D   F+A       +     R  
Sbjct: 353 KV---ADGELA--GPIAKFLTDL-TSQLTEALQLENNDLVLFVADTLEVANAALGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +EL +I+ + F + W++ +P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LGKELDLIDPDTFNYLWVVGWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSPQEATEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++  + +
Sbjct: 527 ALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQVEAHEE 583


>gi|126660983|ref|ZP_01732070.1| aspartyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126617723|gb|EAZ88505.1| aspartyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 598

 Score =  612 bits (1577), Expect = e-173,   Method: Composition-based stats.
 Identities = 239/601 (39%), Positives = 348/601 (57%), Gaps = 17/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH C  +   D+   V L GWV R R HGG+IF+D+RD  GI Q+V++P      + IA
Sbjct: 2   RTHYCNHVSAIDIDKTVTLFGWVDRRRDHGGVIFIDLRDRTGIVQIVSDPQRTPTSYPIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
           +++R+E+V+ I G V  R  E++N  I TG++E+ A+ IE+L+         +       
Sbjct: 62  ETLRNEYVVKIIGQVSKRPPESLNPKIPTGEVEIYAESIELLNGVNKQLPFVVSSLEAES 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E  R KYR+LDLRRD + KN+  R  ++ ++R  +   + F+E  TPILT S+PEGAR
Sbjct: 122 VKEETRLKYRYLDLRRDRMAKNLQLRHAVVKAIRRYLEDEQGFMEIETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGQWYALPQSPQLFKQLLMVSGCDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +D+IL   E ++  +F+   N + +S  F R+ Y DA+ +YGTD+PD R  + 
Sbjct: 241 MEMSFMSEDEILELNEGLVCSIFKTVKNID-LSRPFPRLTYQDAMDKYGTDRPDTRFDLT 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V++    S F+VFS  +      +V  IP      +         + + A   G  G
Sbjct: 300 LVDVSDIVKDSGFKVFSGAVKNGGKVKVLPIPGGNDVISNVQIKPGGDLFKEATDAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AYI  R+ E+  +  +G +  +L       +  R   + G    F AGD        + 
Sbjct: 360 IAYI--RVKENNKLDTIGAIKDNLTEEQKAELLARTGAKPGYLLLFGAGDTDTVNKSLSR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  I Q + +I+ +     WI +FP +EWN +EK+++  H+PFT P         NDL 
Sbjct: 418 LRLVIGQRMNLIDPDKINLLWITEFPMFEWNADEKRLEALHHPFTAPNLADL----NDLA 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NG EI  G +R +  E+  + F  +G+S E   N+FG L  AF+ G PP
Sbjct: 474 TARAQAYDLVYNGVEIGGGSLRIYQKEIQEKVFETIGLSLEEAYNKFGFLLEAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL G  ++R+V  FP +Q    LL  +P++V  +QL+EL ++    P
Sbjct: 534 HGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQASCLLTEAPASVDSKQLKELQVKSTYKP 593

Query: 596 K 596
           K
Sbjct: 594 K 594


>gi|325290213|ref|YP_004266394.1| aspartyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965614|gb|ADY56393.1| aspartyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 598

 Score =  612 bits (1577), Expect = e-173,   Method: Composition-based stats.
 Identities = 234/599 (39%), Positives = 340/599 (56%), Gaps = 13/599 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M + RT   G L    +G  V+L GWV   R HGG+IF+D+RD  G+ QVV NPD A   
Sbjct: 1   MLKGRTE-AGLLTEEMIGQKVKLFGWVQTRRDHGGVIFVDLRDRSGVVQVVFNPDMANEG 59

Query: 61  I--AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
              A+ +RSE+V+ ++GLV  R   + N ++ TG IE+   +  IL+ A+     +    
Sbjct: 60  FLSAERLRSEYVVELEGLVRQRPEGSENPSMTTGGIEVVVGEFAILNRAKTPAFYIQDNL 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  E++R KYR+LDLRR  L K ++ + +++  MR  +    F+E  TPIL  S+PEGAR
Sbjct: 120 EVDETVRLKYRYLDLRRPELQKVLMVKHKVMQIMRSFLDQNGFLEIETPILGRSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVNQG FY LPQ+PQ YKQLLM +G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 180 DYLVPSRVNQGCFYGLPQSPQIYKQLLMVAGVEKYFQIARCFRDEDLRADRQP-EFTQLD 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+E +DI+  ME ++  +F E +          R+ Y +A+ RYG+DKPD R  + 
Sbjct: 239 MEMSFIEIEDIIPLMEQLIAKIFLEVTGKEI-PLPLPRLSYAEAMERYGSDKPDTRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-GGNRAFCDRMNEWARSQGQPGLA 357
           + +V +    S F+VF+  ++      V A+ AKG  G  R   D + ++    G  GLA
Sbjct: 298 LVDVAQVVRESGFKVFADTVAKGG--RVMAVCAKGCSGMPRRELDDLTKFVSQYGAKGLA 355

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI              P+ K       + I   +  + GD  FF A           + R
Sbjct: 356 YIVL-----AEEGMKSPIIKFFTEEEIQRIIAAVGGETGDIIFFCADKEDIVFHALGNLR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ L +I  +     W+ +FP  E++EEEK+    H+ FT P      L   D L++
Sbjct: 411 IELAKRLRLIPGDAVNCLWVTEFPLLEYDEEEKRFAAKHHQFTAPMNEDRELLDTDPLNV 470

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           ++  YD+V NG E+  G IR H  ++  + F  +G+S+E    +FG L  AF+ G PPHG
Sbjct: 471 RSKAYDMVLNGMELGGGSIRIHQRDIQEKIFKLIGLSEEEAHEKFGYLLDAFEYGTPPHG 530

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+A G+DR++M+L G  N+R+V  FP +Q+   L+M +PS VS +QL+EL ++     K
Sbjct: 531 GLAFGLDRLIMILTGRDNIRDVIAFPKTQSASCLMMQAPSAVSGQQLKELHIKTESGVK 589


>gi|46577231|sp|Q83BE5|SYD_COXBU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 590

 Score =  611 bits (1576), Expect = e-173,   Method: Composition-based stats.
 Identities = 229/593 (38%), Positives = 339/593 (57%), Gaps = 5/593 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH    +  S +   + L GWVHR R HGG+IF+D+RD  G+ QVV NP +S  F++A+
Sbjct: 2   RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+V+ + G V  R   T+N +I +G++E++A  I +L+ ++ LP  +   +E  E 
Sbjct: 62  SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R+LDLRR  + + +  R+ II  +R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 122 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +K++LM +GFDRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 182 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ DI   ME ++R +F  F N   + + F RI YD+AI+ YGTD+PDLRNP+ + +VT
Sbjct: 241 VEEKDIQQLMETMIRHLFSTFLNV-PLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF +  +   G        KG   +R   D   ++    G  GLAYI    
Sbjct: 300 DLMKSVEFKVFKEPANNPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVEN 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G      P+ K L       I  R   Q GD  FF A             R+ +  +
Sbjct: 360 IDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFFGADKAKIVNESLGALRDRLCAD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     ++  W++DFP ++  E+       H+PFT  Q         +   + +  YD
Sbjct: 420 LNLY-EGQWKPVWVVDFPMFDR-EDVGDWQALHHPFTALQETDPEKVIANPGDVLSRAYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR +   +       +GISKE+ E +FG L  A Q G PP GGIA G+
Sbjct: 478 MVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLGGIAFGL 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+V ++ GA ++R+V  FP +Q     L  +P+ V   QL  LGL++ ++ K
Sbjct: 538 DRLVAIMTGASSIRDVIAFPKTQTAQCPLTNAPAQVETLQLETLGLKVSKHRK 590


>gi|291561454|emb|CBL40253.1| aspartyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 598

 Score =  611 bits (1576), Expect = e-173,   Method: Composition-based stats.
 Identities = 227/597 (38%), Positives = 343/597 (57%), Gaps = 11/597 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
            R+  C ++  ++VG  + L GWV + R  GGIIF D+RD  GI Q++          F 
Sbjct: 9   KRSCRCAEVTEANVGQKMTLMGWVQKSRNKGGIIFTDLRDRSGIIQIIFEESDCGAESFA 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+ + + G +  RS    N N+ TG IE+ A+ + ILS +E  P P+    + 
Sbjct: 69  KAEKLRSEFTVAVVGTIEKRSGAA-NPNLKTGTIEMRAKSLRILSESEVPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  L +NI+ R+R+   +R  +  E F+E  TP L  S+PEGARD+
Sbjct: 128 KEDLRLKYRYLDLRRPDLQRNIMIRSRVATMVRQFLADEGFLEIETPTLIKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ  KQLLM SG DRYFQ+A C+RDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGEFYALPQSPQLLKQLLMCSGMDRYFQLARCYRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ +D+L   E +L+ +F+E  N + V    LR+ + +A+ R+G+DKPD+R  + + 
Sbjct: 247 LSFVDVEDVLEVNERLLKKLFKEICNFD-VQTPILRMTWREAMDRFGSDKPDMRFGMELK 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV++     EF VF   L             + G   R   D + E+A+  G  GLAY+ 
Sbjct: 306 NVSDVVKDCEFVVFKSALENGGSVRGINADGQAG-MPRKKIDALVEYAKGFGAKGLAYLA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D     +      K +     +A+   ++ + GD  FF A           + R  I
Sbjct: 365 IHEDG----SYKCSFGKFMKQEELDALVKAMNGKPGDLLFFAADKNKVVFDVLGNLRLEI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L ++  + F+F W+ +FP  E++EEE +    H+PFTMP      L   D  +++A 
Sbjct: 421 ARQLDLLKKDDFKFLWVTEFPLLEYSEEEGRYVAMHHPFTMPMEEDLPLIDTDPGAVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H  ++  + F  +G +KE    +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKERAREQFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML++GA ++R+V  FP  ++   L+M +P+ V  +QL +L + IVE   +
Sbjct: 541 YGLDRVVMLMVGADSIRDVIAFPKVKDASCLMMEAPAPVDPKQLEDLDIAIVEKKDE 597


>gi|324991803|gb|EGC23728.1| aspartate--tRNA ligase [Streptococcus sanguinis SK405]
          Length = 584

 Score =  611 bits (1576), Expect = e-172,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 344/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD
Sbjct: 119 VNDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E    + VS  F R+ YDDA+  YG DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGID-VSLPFPRMKYDDAMALYGVDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTELVKGVDFKVFSEA----PVVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  + T  +   L +++ D   F+A       +     R  
Sbjct: 353 KVAEGE-----LAGPVAKFLTDL-TSQLTEALQLENNDLVLFVADTLEVANAALGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++  + +
Sbjct: 527 ALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQVEAHEE 583


>gi|161830701|ref|YP_001597402.1| aspartyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|189082094|sp|A9N999|SYD_COXBR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|161762568|gb|ABX78210.1| aspartyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 590

 Score =  611 bits (1576), Expect = e-172,   Method: Composition-based stats.
 Identities = 230/593 (38%), Positives = 340/593 (57%), Gaps = 5/593 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH    +  S +   + L GWVHR R HGG+IF+D+RD  G+ QVV NP +S  F++A+
Sbjct: 2   RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+V+ + G V  R   T+N +I +G++E++A  I +L+ ++ LP  +   +E  E 
Sbjct: 62  SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R+LDLRR  + + +  R+ II  +R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 122 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +K++LM +GFDRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 182 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ DI   ME ++R +F  F N   + + F RI YD+AI+ YGTD+PDLRNP+ + +VT
Sbjct: 241 VEEKDIQQLMETMIRHLFSTFLNV-PLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF +  +   G        KG   +R   D   ++    G  GLAYI    
Sbjct: 300 DLMKSVEFKVFKEPANNPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVEN 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G      P+ K L       I  R   Q GD  FF A             R+ +  +
Sbjct: 360 IDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFFGADKAKIVNESLGALRDRLCAD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     ++  W++DFP ++  E+       H+PFT  Q         +   + +  YD
Sbjct: 420 LNLY-EGQWKPVWVVDFPMFDR-EDVGDWQALHHPFTALQETDPEKVIANPGDVLSRAYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR +   +    F  +GISKE+ E +FG L  A Q G PP GGIA G+
Sbjct: 478 MVLNGSEIGGGSIRINDIGMQYAVFKVLGISKEMAEAQFGHLLMALQFGSPPLGGIAFGL 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+V ++ GA ++R+V  FP +Q     L  +P+ V   QL  LGL++ ++ K
Sbjct: 538 DRLVAIMTGASSIRDVIAFPKTQTAQCPLTNAPAQVETLQLETLGLKVSKHRK 590


>gi|157828061|ref|YP_001494303.1| aspartyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|157800542|gb|ABV75795.1| aspartyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
          Length = 612

 Score =  611 bits (1576), Expect = e-172,   Method: Composition-based stats.
 Identities = 302/605 (49%), Positives = 413/605 (68%), Gaps = 10/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 11  MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 70

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  + S A+ LP  +  E++
Sbjct: 71  EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 130

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 131 APEESRLKHRFLDLRREKLHNNIILRSQIISHLRHLMTARGFTEFQTPILTASSPEGARD 190

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 191 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 250

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++       F+ I Y++++ +YG+DKPDLRNPII+
Sbjct: 251 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 310

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTE F  S+F +F + +           P K     R+F D+M E+A S+G  GL YI
Sbjct: 311 ADVTEIFRDSDFTIFRENIKKGSIVRAIPAP-KAAALPRSFFDKMIEFAISEGAGGLGYI 369

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +    S      GPV K L+    E+++    + +GD+ FF +    K    A   R  
Sbjct: 370 QF----SETGEAKGPVVKFLSPQQLESLKATASVSNGDAVFFASDKKEKAAKLAGKVRIR 425

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDLL 475
           + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +LL
Sbjct: 426 LGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEELL 485

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G PP
Sbjct: 486 ELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAPP 545

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  + 
Sbjct: 546 HGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPSA 605

Query: 596 KKILK 600
           +K  +
Sbjct: 606 RKNAE 610


>gi|257455401|ref|ZP_05620636.1| aspartyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257447363|gb|EEV22371.1| aspartyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 606

 Score =  611 bits (1576), Expect = e-172,   Method: Composition-based stats.
 Identities = 231/606 (38%), Positives = 339/606 (55%), Gaps = 17/606 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG +  +     + + GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RTHYCGLVTENLNDQTITICGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYPE 122
           S RSE+VL I G V  R A T N N+ +GQ+EL A+ IE ++ +E  P P+  E     E
Sbjct: 63  SARSEYVLKITGRVRQRYAGTENKNMTSGQVELLAKDIETIATSETPPFPLNDEFTNVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLD+RR  + + +  R +  +++R  +  + F++  TPILT ++PEGARD+LV
Sbjct: 123 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDQGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRVSNGEFYALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  +DI+N  E + + +F+   N    +  F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLSDEDIMNIAEGLTKDLFKTMMNIEFDT--FPRMTYAEAMRDYASDKPDLRIPMKLIDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     EF+VFS       G  V     +G    R   D   ++    G  GLAYI   
Sbjct: 300 ADIMQSVEFKVFSGPAQDPKGRVVALRVPQGSDLTRKQIDEYTKFVGIYGAKGLAYIKVN 359

Query: 363 LDE------SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
                            P+ K++       +  R + Q GD  FF A             
Sbjct: 360 DVSNINNGVDKESGLQSPIIKNMTDEVLIELIKRTEAQTGDIIFFGADKAKVVNDAMGAL 419

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE----KKIDFAHNPFTMPQGGMESLKGN 472
           R  +  +L ++    +   W++DFP +E  +       K    H+PFT P+G +E++K N
Sbjct: 420 RVKLGLDLNMLTQE-WAPLWVVDFPMFEETDSGDGLGGKWTSVHHPFTKPKGTVEAMKNN 478

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
              +  +  YD+V NG EI  G +R +  ++    F  +GIS+   E +F  L  A + G
Sbjct: 479 -PETALSIAYDMVLNGTEIGGGSLRINTLDMQKAVFEALGISEAEAEEKFSFLLNALKYG 537

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG+A G+DR++ML+ G++++R+V  FP ++     L  +P+ V  +QLRELG+RI 
Sbjct: 538 APPHGGLAFGLDRLIMLMTGSQSIRDVIAFPKTKTAECPLTEAPAPVDGKQLRELGIRIR 597

Query: 593 ENPKKI 598
           E   K 
Sbjct: 598 EKDSKA 603


>gi|20139895|sp|Q92J82|SYD_RICCN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 602

 Score =  611 bits (1576), Expect = e-172,   Method: Composition-based stats.
 Identities = 302/605 (49%), Positives = 413/605 (68%), Gaps = 10/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 1   MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  + S A+ LP  +  E++
Sbjct: 61  EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 121 APEESRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++       F+ I Y++++ +YG+DKPDLRNPII+
Sbjct: 241 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTE F  S+F +F + +           P K     R+F D+M E+A S+G  GL YI
Sbjct: 301 ADVTEIFRDSDFTIFRENIKKGSIVRAIPAP-KAAALPRSFFDKMIEFAISEGAGGLGYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +    S      GPV K L+    E+++    + +GD+ FF +    K    A   R  
Sbjct: 360 QF----SETGEAKGPVVKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRIR 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDLL 475
           + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +LL
Sbjct: 416 LGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEELL 475

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G PP
Sbjct: 476 ELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAPP 535

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  + 
Sbjct: 536 HGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPSA 595

Query: 596 KKILK 600
           +K  +
Sbjct: 596 RKNAE 600


>gi|160936536|ref|ZP_02083903.1| hypothetical protein CLOBOL_01426 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440327|gb|EDP18072.1| hypothetical protein CLOBOL_01426 [Clostridium bolteae ATCC
           BAA-613]
          Length = 596

 Score =  611 bits (1576), Expect = e-172,   Method: Composition-based stats.
 Identities = 229/596 (38%), Positives = 345/596 (57%), Gaps = 11/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
            RTH C ++  + +G  V + GWV + R  GGIIF+D+RD  GI Q++   +      F 
Sbjct: 9   KRTHRCTEVTTAHIGQEVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEENDCGAENFA 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ + G V +RS   +N N+ TG IE+ A  + ILS +E  P P+    + 
Sbjct: 69  KAEKLRSEFVVAVTGRVEARSG-AVNTNLATGAIEIRANSMRILSESETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR  L KN++ R+++    R  + +E F+E  TP L  S+PEGARD+
Sbjct: 128 KEELRLKYRFLDLRRPDLQKNLMIRSQVATLTRAFLASEGFLEIETPTLIKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQ+A C+RDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQLARCYRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+L+  E +L+ +F+E    + V     R+ + +A+ R+G+DKPDLR  + + 
Sbjct: 247 LSFVDVDDVLDVNERLLKKLFKEICGFD-VQLPIPRMTWQEAMDRFGSDKPDLRFGMELK 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+E     EF VF   L             +G    R   D + E+A+  G  GLAY+ 
Sbjct: 306 NVSEVVKGCEFAVFKGALENGGSVRGINAQGQG-HMPRKKIDALVEYAKGFGARGLAYVA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G V      AK +      A+   +D + GD   F A           + R  +
Sbjct: 365 --ISEDGTVK--SSFAKFMKEEEMTALISAMDGKPGDLLLFAADRNKVVFDVLGNLRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L ++  + F+F W+ +FP  E++EEE +    H+PFTMP         +D   ++A 
Sbjct: 421 ARQLDLLKKDDFKFLWVTEFPLLEYSEEEDRYVAMHHPFTMPMDEDLQYIDSDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H +++  + F  +G + E    +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGVEMGGGSVRIHQADIQSKMFEVLGFTPERAGEQFGFLLEAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VML++GA ++R+V  FP  ++   L+  +P  V  +QL EL + +    +
Sbjct: 541 YGLDRVVMLMVGADSIRDVIAFPKVKDASCLMTEAPGQVDEKQLEELHIAVAAEEE 596


>gi|172039065|ref|YP_001805566.1| aspartyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|226710852|sp|B1WRQ9|SYD_CYAA5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|171700519|gb|ACB53500.1| aspartyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 598

 Score =  611 bits (1576), Expect = e-172,   Method: Composition-based stats.
 Identities = 238/601 (39%), Positives = 348/601 (57%), Gaps = 17/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH C  +  +D+   V L GWV R R HGG+IF+D+RD  GI Q+V++P      + IA
Sbjct: 2   RTHYCNHISATDIDKTVTLFGWVDRRRDHGGVIFIDLRDRTGIVQIVSDPQRTPTSYPIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
           +++R+E+V+ I G V  R  E++N  I TG++E+ A+ IE+L+         +       
Sbjct: 62  ETLRNEYVVKIIGQVSQRPPESLNPKIPTGEVEIYAESIELLNGVNKQLPFVVSSLEAEL 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E  R KYR+LDLRRD + KN+  R  ++ +MR  +   + F+E  TPILT S+PEGAR
Sbjct: 122 VKEETRLKYRYLDLRRDRMAKNLQLRHAVVKAMRRYLEDEQQFMEIETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGQWYALPQSPQLFKQLLMVSGCDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +++IL+  E ++  +F+   N   +   F R+ Y DA+ +YGTD+PD R  + 
Sbjct: 241 MEMSFMSEEEILDLNEGLVCHIFKAVKNIE-LPRPFPRLTYQDAMAKYGTDRPDTRFDLT 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V++    S F+VFS  +      +V  IP      +         + + A   G  G
Sbjct: 300 LVDVSDIVKDSGFKVFSGAVKNGGKVKVLPIPGGNDIISNVQIKPGGDLFKEATDAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AYI  R+ E+  +  +G +  +L       +  R   + G    F AGD        + 
Sbjct: 360 IAYI--RVKENNKLDTIGAIKDNLTEEQKRELLARTGAKPGYLLLFGAGDTDTVNKSLSR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  I Q + +I+       WI +FP +EWN +EK+++  H+PFT P         NDL 
Sbjct: 418 LRLVIGQRMNLIDPEKINLLWITEFPMFEWNADEKRLEALHHPFTAPNLADL----NDLA 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NG EI  G +R +  E+  + F  +G+S E   N+FG L  AF+ G PP
Sbjct: 474 TARAQAYDLVYNGVEIGGGSLRIYQKEIQEKVFETIGLSLEEAYNKFGFLLEAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +P++V  +QL+EL ++    P
Sbjct: 534 HGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQASCLLTEAPASVDTKQLKELQVKSTYKP 593

Query: 596 K 596
           K
Sbjct: 594 K 594


>gi|301029316|ref|ZP_07192413.1| aspartyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|299877742|gb|EFI85953.1| aspartyl-tRNA synthetase [Escherichia coli MS 196-1]
          Length = 577

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 214/580 (36%), Positives = 321/580 (55%), Gaps = 7/580 (1%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGL 76
           G  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G 
Sbjct: 2   GQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGT 61

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR 
Sbjct: 62  VRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRP 119

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ
Sbjct: 120 EMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQ 179

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME +
Sbjct: 180 SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEAL 238

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+ 
Sbjct: 239 VRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAG 296

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
             +   G         G    R   D    + +  G  GLAYI       G      PVA
Sbjct: 297 PANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVA 356

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K LN    E I  R   QDGD  FF A +           R  + ++LG+ + + +   W
Sbjct: 357 KFLNAEIIEDILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLW 416

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           ++DFP +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +
Sbjct: 417 VIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSV 475

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+
Sbjct: 476 RIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNI 535

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 RDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 575


>gi|170719031|ref|YP_001784189.1| aspartyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189082101|sp|B0USU0|SYD_HAES2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|168827160|gb|ACA32531.1| aspartyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 588

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 211/592 (35%), Positives = 328/592 (55%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S +G  V LSGWVH+ R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RSHYCGALNRSHIGQQVILSGWVHKRRDLGGLIFIDMRDREGIVQVCFDPKYQEALTEAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + I+G V++R    IN N+ TG++E+ A+ + + +V++   LP+   +   E 
Sbjct: 63  ALRNEFCIKIEGEVIARPDNQINKNMATGEVEVVAKALSVYNVSD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +++  R +I   +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQHLKTRAKITAFVRRYMDENGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++ G++   +        F  + + +A+ R+G+DKPDLRNP+ + +V 
Sbjct: 240 MTAPEVREIMEKMVHGLW--LNTIGVDLGKFPTMTWQEAMERFGSDKPDLRNPLEIVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F VFS   + + G         G    R   D   ++    G  GLA++    
Sbjct: 298 DIVKDIDFNVFSDPANSSNGRVAVIRVPNGINITRKQIDEYTQFVGIYGAKGLAWVKIND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+AK L     +AI  R   Q  D  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPIAKFLTTEKIKAIFDRTSAQSDDILFFGADKWQTATDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+ + + ++  W++DFP +E +EE   +   H+PFT P+         +  S  A  YD
Sbjct: 418 LGLTHLDEWKPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFTPEQLEANPTSAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F  +GI ++    +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFHILGIDEDQQREKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G  N+R+V  FP +     L+  +PS  + + L EL +++  + 
Sbjct: 537 DRLTMLLTGTDNIRDVIAFPKTTAAACLMTDAPSLANEKALEELAIKVTRSE 588


>gi|88658180|ref|YP_507154.1| aspartyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|123722796|sp|Q2GHC9|SYD_EHRCR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|88599637|gb|ABD45106.1| aspartyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 590

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 302/596 (50%), Positives = 407/596 (68%), Gaps = 9/596 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACF 59
           M+ YRTH C  L    +   V LSGW++R R HG IIF+D+RDHYGITQ+V N  D+  F
Sbjct: 1   MNIYRTHLCDQLRKEHINQEVTLSGWIYRKRDHGKIIFVDLRDHYGITQLVFNEADNQNF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           ++   +R E V+ + G+V++R + TIN  + TG IE+  + + I   A+ LPL +   ++
Sbjct: 61  QLITHLRLESVITVKGIVVARDSSTINTAVSTGFIEVVVKHVIIEGEADPLPLNITSTQD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           YPE IR KYRFLDLRRD +  NI+ R++II+ +R  M A  FIE  TPILT+SSPEGARD
Sbjct: 121 YPEEIRLKYRFLDLRRDKVKNNIILRSKIISELRKSMEAMGFIEIQTPILTSSSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR++ G FYALPQAPQ +KQ+LM SGFD+YFQIAPCFRDED RSDR PGEFYQLD+
Sbjct: 181 YLVPSRIHHGKFYALPQAPQLFKQILMVSGFDKYFQIAPCFRDEDARSDRSPGEFYQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ N +E VL  VF +FSN  T+   F RI Y DA+  YG+DKPDLRNP+I+
Sbjct: 241 EMSFVSQEDVFNVIEPVLLNVFSKFSN-KTIDKEFPRISYHDAMLHYGSDKPDLRNPLII 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S+F +F+   ++  G  V AIPA     N R+F D   E+A++ G  GL Y
Sbjct: 300 QDVTEIFRDSQFNIFNS--NIKQGMVVRAIPAPNTATNPRSFFDNKIEFAKTLGAQGLGY 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D     +  GP+AK L+      I+   ++Q GDS FF++    K    A + R 
Sbjct: 358 ITFNDD----FSAKGPIAKFLDEERLNRIKSICNLQPGDSVFFVSETEDKATELAGEVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL +I  + F FCWI+DFP+++++++EK I+F HNPF+MPQGG+E+L   + L I 
Sbjct: 414 LLGKELNLIEKDTFRFCWIIDFPYFKYDKKEKSINFFHNPFSMPQGGLEALNNQNPLDIL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG EI+SG IRNH  ++M +AFS  G +KE+V+ +F  L RAF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIEISSGAIRNHKLDIMYKAFSIAGYTKEMVDQKFNSLTRAFKFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA GIDR+VMLL  A N+REV  FP++Q+  DLLM +PS +  E L+ L L I + 
Sbjct: 534 IAPGIDRMVMLLADATNIREVICFPLNQSGEDLLMSAPSEIDKEHLKLLSLSITKK 589


>gi|182624429|ref|ZP_02952213.1| aspartyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|177910432|gb|EDT72809.1| aspartyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 597

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 338/595 (56%), Gaps = 13/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            R   CGD   S +G  V + GWV R R  GG+ F+D+RD  GI QVV N D      E 
Sbjct: 9   KRNIMCGDARESHIGQKVTVMGWVQRNRNLGGLQFIDLRDREGILQVVFNDDLGEEILEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AKS+R E+ + + G ++ R  E++N N+ TG +EL A++++ILS ++  P+ +  + +  
Sbjct: 69  AKSIRPEYCIAVTGEIVKR--ESVNPNMPTGMVELKAEELKILSESDTPPIYIKEDLDAA 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           ESIR KYR+LDLRR  +      R +   ++R  +    F+E  TPILT S+PEGARD+L
Sbjct: 127 ESIRLKYRYLDLRRPDMQNIFKIRHKTTKAIRDYLDQNGFLEMETPILTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R++R P EF Q+D+EM
Sbjct: 187 VPSRNYPGMFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRANRQP-EFTQVDLEM 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQDD++   E +++ VF+E    + V     R+ + DA+ +YG+DKPDLR  + + N
Sbjct: 246 SFVEQDDVMALNEGLIKHVFKEVLGVD-VKTPIKRMTFKDAMEKYGSDKPDLRFGMEITN 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++      F+VF+  ++         +   G    R   DR+ E+ ++    GLA+I  
Sbjct: 305 LSDVVKECGFKVFTDAVANGGSVRGLCL-EGGASMGRKDIDRLGEFVKTFKAKGLAWIQL 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +           P+AK         I   +  + GD    +A           + R  ++
Sbjct: 364 K-----EEGVKSPIAKFFQEEELNKIIETMGAKTGDLILIVADKNSVVLKALGELRLELS 418

Query: 422 QELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           ++  ++ + + F F WI +F   E++EEE +   AH+PFTMP          D   ++A 
Sbjct: 419 RKFDLVKDKSEFNFTWITEFDLLEYDEEEGRYFAAHHPFTMPMDEDIKYLDTDPGRVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H +++  + F  +G ++E    RFG L  AF+ G PPHGG+A
Sbjct: 479 AYDLVLNGEELGGGSIRIHDTKLQEKMFEVLGFTQESAWERFGFLLEAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+DR++M L G +N+++V  FP +QN    L  +P+ V  EQL+ELG+  ++  
Sbjct: 539 FGLDRMIMFLAGTENIKDVITFPKNQNAFCYLTEAPNIVDEEQLKELGIETIKKE 593


>gi|171778545|ref|ZP_02919672.1| hypothetical protein STRINF_00524 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282768|gb|EDT48192.1| hypothetical protein STRINF_00524 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 582

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 230/595 (38%), Positives = 343/595 (57%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             RT   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    ++ 
Sbjct: 1   MKRTMYAGRVRSEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSSDVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+R+E+V+ + G+V  R  E  N N+ TG +EL    + +L+ A+  P  +  + E
Sbjct: 61  ATAESLRNEFVIEVTGVVAQR--EQENTNLPTGAVELKVSALIVLNTAKTTPFEIKDDVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  +  N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDDNRLRYRYLDLRRPKMLNNFKLRAKVTHSIRNYLDGLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+DM
Sbjct: 179 YLVPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDM 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   DI +  E ++  V ++    + V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSDKDIQDITEGMIAKVMKDTKGID-VTLPFPRMSYDDAMNNYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTEVVKDVDFKVFSQA----PVVKAIVVKGNADKYSRKNIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +      + +  GPVAK L  +  + +   L ++D D   F+A       +     R  
Sbjct: 353 KFT-----DGSLNGPVAKFLTSIE-DKLTASLQLEDNDLVLFVADTLEVANNTLGALRTR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +++ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IAKELDMVDNSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEESAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E+  + F  +G + E   ++FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQRELQERMFKALGFTAEEAADQFGFLLEAMNYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L    N
Sbjct: 527 AIGLDRFVMLLAGEDNIREVIAFPKNNKATDPMTQAPSLVSDKQLEELALATKTN 581


>gi|297569982|ref|YP_003691326.1| aspartyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925897|gb|ADH86707.1| aspartyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 593

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 222/589 (37%), Positives = 345/589 (58%), Gaps = 11/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           R+H C  L    +G  V L GWV R R HGG+IF+D+RD  GITQVV NP++       A
Sbjct: 9   RSHHCNILNAEHIGREVTLMGWVLRRRDHGGVIFIDLRDRRGITQVVFNPETNPEVHAKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++RSEWVL + G V +R     N  + TG+IE+   +++IL+ ++  P P+  E E  +
Sbjct: 69  HALRSEWVLAVKGTVRARPEGMANPKLKTGEIEVMVSELKILNQSQTPPFPLDEEIEISD 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R +YR+LDLRR  +  N++ R +   ++R  +  E+F+E  TP+LT S+PEGARD+LV
Sbjct: 129 NLRLQYRYLDLRRPAMAHNLLLRHQACQAIRQYLNGEDFLEIETPVLTRSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G F+ALPQ+PQ +KQLLM +G +RY+QI  CFRDED R+DR P EF Q+DME+S
Sbjct: 189 PSRVNPGRFFALPQSPQLFKQLLMVAGMERYYQIVRCFRDEDLRADRQP-EFTQVDMELS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV +++++   E +++ +F        ++  F R+ Y +A+ R+GTD+PD R  + +  +
Sbjct: 248 FVGEEEVMAVAEGMMKALFAATLGRE-LAPPFPRMTYAEAMARFGTDRPDTRFGLELVEL 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIFW 361
           TE   +   +VF +I       +   I AKG    +R   D +  +A   G  GLA++  
Sbjct: 307 TEVVKNCGLKVFREIADKGGMIKS--INAKGCADFSRKDLDDLTAYAGQFGAKGLAWVKI 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +           P+AK       +A+   +  +  D  FF+A  P       A+ R  +A
Sbjct: 365 KEGG----EWQSPIAKFFTEEERQAMMDTMQAEKDDLLFFVADQPAIVHGALAELRLELA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L +++   F F W+ DFP  E++ E K+    H+PFT P+    +L  ++   +++  
Sbjct: 421 RRLELVSKEDFSFVWVTDFPLLEYDHEAKRHVAVHHPFTAPREEDLALLDSEPGKVRSRA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  E+  + F+ +GIS+E + ++F  L RA + G PPHGG+A 
Sbjct: 481 YDLVLNGTEIGGGSIRIHHKEMQERVFAALGISQEEINDKFDFLVRALELGAPPHGGLAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G+DR++M++ G  ++R+V  FP +Q     L  +P+ V+  QL EL L+
Sbjct: 541 GLDRLMMIIAGRDSIRDVIAFPKTQKATCPLTNAPAPVARRQLTELSLK 589


>gi|189082093|sp|A9KF44|SYD_COXBN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 590

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 229/593 (38%), Positives = 339/593 (57%), Gaps = 5/593 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH    +  S +   + L GWVHR R HGG+IF+D+RD  G+ QVV NP +S  F++A+
Sbjct: 2   RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+V+ + G V  R   T+N +I +G++E++A  I +L+ ++ LP  +   +E  E 
Sbjct: 62  SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R+LDLRR  + + +  R+ II  +R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 122 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +K++LM +GFDRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 182 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ DI   ME ++R +F  F N   + + F RI YD+AI+ YGTD+PDLRNP+ + +VT
Sbjct: 241 VEEKDIQQLMETMIRHLFSTFLNV-PLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF +  +   G        KG   +R   D   ++    G  GLAYI    
Sbjct: 300 DLMKSVEFKVFKEPANNPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVEN 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G      P+ K L       I  R   Q GD  FF A             R+ +  +
Sbjct: 360 IDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFFGADKAKIVNESLGALRDRLCAD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     ++  W++DFP ++  E+       H+PFT  Q         +   + +  YD
Sbjct: 420 LNLY-EGQWKPVWVVDFPMFDR-EDVGDWQALHHPFTALQETDPEKVIANPGDVLSRAYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR +   +       +GISKE+ E +FG L  A Q G PP GGIA G+
Sbjct: 478 IVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLGGIAFGL 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+V ++ GA ++R+V  FP +Q     L  +P+ V   QL  LGL++ ++ K
Sbjct: 538 DRLVAIMTGASSIRDVIAFPKTQTAQCPLTNAPAQVETLQLETLGLKVSKHRK 590


>gi|154505862|ref|ZP_02042600.1| hypothetical protein RUMGNA_03404 [Ruminococcus gnavus ATCC 29149]
 gi|153793880|gb|EDN76300.1| hypothetical protein RUMGNA_03404 [Ruminococcus gnavus ATCC 29149]
          Length = 612

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 227/596 (38%), Positives = 337/596 (56%), Gaps = 10/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EI 61
            RTH CG+L  +++G  V + GWV + R  GGI+F+D+RD  GI Q+V   +      E 
Sbjct: 22  KRTHRCGELSSANIGEKVTVMGWVQKNRNKGGIVFMDLRDRSGILQIVFEGEEQAELMEK 81

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+V+ + G V  RS   +N N+ TG+IE+ A+++ ILS +E  P  V    +  
Sbjct: 82  ASKLRSEFVVAVVGNVEKRSG-AVNENLATGEIEVRAEELRILSESEVPPFQVEENSKTK 140

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L +N+  R+++    R     E F+E  TPIL  ++PEGARD+L
Sbjct: 141 EELRLKYRYLDLRRPDLQRNLRMRSQVTTLARQFFAEEGFLEIETPILGKTTPEGARDYL 200

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ GSFY LPQ+PQ YKQLLM SG DRY QIA CFRDED R+DR P EF Q+DME+
Sbjct: 201 VPSRVHPGSFYGLPQSPQLYKQLLMCSGCDRYIQIAKCFRDEDLRADRQP-EFTQIDMEL 259

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD++   E  L  +F+E  + + V     R+ + +A+ RYG+DKPD R  + + N
Sbjct: 260 SFVDVDDVIEVNERFLAKLFKEVLDVD-VQLPIQRMTWQEAMDRYGSDKPDTRFGMELVN 318

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VTE    SEF VF   +             +G    R   D++  +A+  G  GLAYI  
Sbjct: 319 VTETVKDSEFVVFKGAIENGGTVRGINAKGQG-AMPRKKIDKLVAFAKDFGAKGLAYIAI 377

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +  E G V      +K +       +   ++ + GD   F A           + R  +A
Sbjct: 378 Q--EDGTVK--SSFSKFMTEEEMNNLIAAMNGEAGDLLLFAADKNKVVWDVLGNLRLELA 433

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +++ +++ N + F W+ +FP  EW++E+ +    H+PFTMP          +   ++A  
Sbjct: 434 KQMELLDKNQYNFLWVTEFPLLEWSDEQNRYLAMHHPFTMPMEEDLQYIDFEPGRVRAKA 493

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G +R   ++V  + F  +G +KE    +FG L  AF+ G+PPH G+A 
Sbjct: 494 YDIVLNGNEIGGGSVRIFQNDVQEKMFEVLGFTKEQAYEQFGFLLDAFKYGVPPHAGLAY 553

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VML+    ++R+V  FP  ++   L+  +PS    +QL ELGL++     K
Sbjct: 554 GLDRMVMLMAKEDSIRDVMAFPKIKDASCLMTQAPSMADNKQLEELGLKLDAKDVK 609


>gi|93006011|ref|YP_580448.1| aspartyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|123264609|sp|Q1QBI9|SYD_PSYCK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|92393689|gb|ABE74964.1| aspartyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 608

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 227/599 (37%), Positives = 341/599 (56%), Gaps = 14/599 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIA 62
           YR   CG +  S +   + + GWVHR R HGG+IFLD+RD  GI QVV +PD+   F IA
Sbjct: 6   YRDEYCGAVTESLIEQTISVVGWVHRRRDHGGVIFLDMRDRAGILQVVVDPDTPEAFAIA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
            +VR E+V+ I G V  R A T NAN+ +G IEL A++IE+L+ +E  P P+  E+    
Sbjct: 66  DAVRPEYVIKITGRVRQRYAGTENANMTSGHIELLAKEIEVLAKSETPPFPLNDEKSTVS 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LD+RR  +   +V R +  +++R  +    F++  TPILT ++PEGARD+L
Sbjct: 126 EDLRLKYRYLDMRRPQMQDRMVFRAKATSAIRRYLDDHGFLDVETPILTRATPEGARDYL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E 
Sbjct: 186 VPSRTRPGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIET 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ +++I+N  E +++ VF+   +       F R+ Y +A+R Y +DKPDLR P+ + +
Sbjct: 245 SFLNEEEIMNINEGLIKHVFKTMMDVEF--EQFPRMTYAEAMRDYASDKPDLRIPLKLID 302

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V +     +F+VF+   +   G         G   +R   D   ++    G  GLAYI  
Sbjct: 303 VADLMKDVDFKVFAGPANDPKGRVAALRIPGGASLSRKQIDAYTKFVSIYGARGLAYIKV 362

Query: 362 RLDE------SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
                             P+ K++      ++  R   +  D  FF A            
Sbjct: 363 NDASNINNGVDKESGLQSPIIKNMTDDVLVSLIERTGAESNDIIFFGADKASVVNDAIGA 422

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  I  +L +  C  +   W+ DFP +E  E+  +    H+PFT P+G +E LK  +  
Sbjct: 423 LRQKIGLDLEMTTCE-WAPLWVTDFPMFEETED-GRWTSMHHPFTKPKGSVEELK-TNPE 479

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           S  +  YD+V NG E+  G +R +  E+    F  +GI  +  E++FG L  A + G PP
Sbjct: 480 SALSIAYDMVLNGTEVGGGSLRINTLEMQTAVFEALGIDDQEAEDKFGFLLDALKFGAPP 539

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           HGG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V+ +QLRELG+R+ E 
Sbjct: 540 HGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTAECPLTQAPAEVNTKQLRELGIRVREK 598


>gi|229586385|ref|YP_002844886.1| aspartyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259511869|sp|C3PMI3|SYD_RICAE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|228021435|gb|ACP53143.1| Aspartyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 602

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 303/605 (50%), Positives = 414/605 (68%), Gaps = 10/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 1   MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  + S A+ LP  +  E++
Sbjct: 61  EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  RFK+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 121 APEESRFKHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++       F+ I Y++++ +YG+DKPDLRNPII+
Sbjct: 241 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTE F  S+F +F + +           P K     R+F D+M E+A S+G  GL YI
Sbjct: 301 ADVTEIFRDSDFTIFRENIKKGSIVRAIPAP-KAAALPRSFFDKMIEFAVSEGAGGLGYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +    S      GPV K L+    E+++    + +GD+ FF +    K    A   R  
Sbjct: 360 QF----SETGEAKGPVVKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRIR 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDLL 475
           + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +LL
Sbjct: 416 LGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEELL 475

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G PP
Sbjct: 476 ELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAPP 535

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  + 
Sbjct: 536 HGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPSA 595

Query: 596 KKILK 600
           +K  +
Sbjct: 596 RKNAE 600


>gi|324996307|gb|EGC28215.1| aspartate--tRNA ligase [Streptococcus sanguinis SK678]
 gi|327490475|gb|EGF22257.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 584

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 345/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD
Sbjct: 119 VNDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E    + VS  F R+ YDDA+  YG DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGID-VSLPFPRMKYDDAMALYGVDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G +   GPVAK L  + T  +   L +++ D   F+A       +     R  
Sbjct: 353 KV---ADGELT--GPVAKFLTDL-TSQLTETLQLENNDLVLFVADTLEVANAALGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++  + +
Sbjct: 527 ALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQVEAHEE 583


>gi|302342313|ref|YP_003806842.1| aspartyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638926|gb|ADK84248.1| aspartyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 595

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 224/593 (37%), Positives = 331/593 (55%), Gaps = 12/593 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61
            RTH+CG L  +DVG  V L GW  R R HGG+IF+D+RD  G+TQVV NP+ +     +
Sbjct: 10  KRTHTCGQLTAADVGKQVVLMGWCQRRRDHGGLIFVDLRDRDGLTQVVFNPEVSGGSHSL 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A ++R+E+ L + G V  R     N  + TG +E+     EIL+ ++  P  +    +  
Sbjct: 70  AHAIRNEYCLALQGKVDLRPEGMQNDKLGTGAVEVYVSDFEILNASKTPPFMLEDWIDVG 129

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  + +N+  R +   + R  +  + F+E  TP LT S+PEGARD+L
Sbjct: 130 EAVRLKYRYLDLRRQVVFRNLKLRHQAAQAARGYLNDQGFLEVETPFLTKSTPEGARDYL 189

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV +G FYALPQ+PQ +KQLLM  G +RY+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 190 VPSRVQRGRFYALPQSPQLFKQLLMVGGVERYYQIVKCFRDEDLRADRQP-EFTQVDLEM 248

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++D+++  E ++  + +             R+ Y  A+ R+G D PD+R  + + +
Sbjct: 249 SFVDENDVMDLTEGLVGAILKATRGVE--LGPVPRLSYAQAMERFGLDAPDIRFGLELTD 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYIF 360
           + E    ++F+VF     ++ G  V AI  KG GG +R   D +  +    G  GLA++ 
Sbjct: 307 LGELMQKTQFKVFRGA--IDGGGVVKAINGKGMGGLSRKDLDDLTAFVADYGAKGLAWVK 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +           P+AK +      AI  R+  +DGD  FF A             R  +
Sbjct: 365 LKDGGQ----WQSPIAKFIEPEVQAAINERMAAEDGDILFFGADKKPVVSESLGRLRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           ++   + + +   FCW+ DFP +E++ +EK+ +  H+PFT P+   E   G+D  +  A 
Sbjct: 421 SRRFQLTSPDDLRFCWVTDFPMFEYDPQEKRYNAMHHPFTSPKSEFEDKMGSDPEACLAR 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H  E   + F  + I  E    +FG L  A   G PPHGG+A
Sbjct: 481 AYDLVLNGSEVGGGSIRIHRPETQAKVFGALNIDDEQAREKFGFLLDALAFGAPPHGGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G DR+V +L G  ++REV  FP +Q     +  +PSTV   QL ELGLR+ +
Sbjct: 541 LGFDRLVAILAGQGSIREVIAFPKTQKASCPMTDAPSTVDRNQLLELGLRVEK 593


>gi|188588113|ref|YP_001920365.1| aspartyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|238689665|sp|B2V351|SYD_CLOBA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|188498394|gb|ACD51530.1| aspartyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 599

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 229/597 (38%), Positives = 341/597 (57%), Gaps = 13/597 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG+     VG  + L GWV R R  GG+ F+D+RD  GI QVV     ++  FE 
Sbjct: 9   KRTMMCGEPREEHVGQKITLMGWVQRNRKLGGLDFIDLRDKTGIMQVVFGEEINAEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK VR E+ + + G V+ R  E++N N+ TG +EL  Q ++ILS +E  P+ +    +  
Sbjct: 69  AKGVRPEYCIAVTGEVVKR--ESVNENMPTGFVELKCQSLKILSESETPPIYIKENLDAA 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  +H+    R++   S+R  +   +F++  TP+LT S+PEGARD+L
Sbjct: 127 ENIRLKYRYLDLRRPDMHRIFEIRSKTTKSIRDYLEKNDFLDVETPMLTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYPGMFYALPQSPQIFKQLLMVSGFDKYYQIVKCFRDEDLRANRQP-EFTQVDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQDDI+   E ++  VF+E +  + V     R+ + DA+ +YG+DKPDLR  + + N
Sbjct: 246 SFVEQDDIMALNEGLIAHVFKEVAGVD-VKLPIKRMTFKDAMEKYGSDKPDLRFGMEITN 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F VF   +          +   G    R   D++ E+ ++    GLA+I  
Sbjct: 305 ITEDVKDMDFVVFKSAIEAGGSVRALCLK-GGAALGRKPLDKLGEFVKTYKAKGLAWIQL 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D          +AK L    T +I   +  + GD+   +A             R  +A
Sbjct: 364 KED-----GVKSSIAKFLTDDVTNSIIETMGAETGDAILIVADKESVVFQSLGALRLELA 418

Query: 422 QELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           ++  +I + N F F WI +FP +E++EEE++    H+PFT P         +    +++ 
Sbjct: 419 KQFELIKDKNEFNFTWITEFPLFEYSEEEERYTACHHPFTAPMEEDLDFLESAPGKVRSK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H  E+  + F  +G ++E    RFG L +AF+ G PPHGG+A
Sbjct: 479 AYDLVLNGEELGGGSIRIHDMELQQRMFKALGFTEEQAWERFGFLLQAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR++M L G +N+++V  FP +QN    L  +P+    +QL ELG+ I+   +K
Sbjct: 539 FGLDRMIMFLAGTENIKDVIAFPKNQNAYCYLSEAPNIADEKQLTELGIGILPKQEK 595


>gi|68171185|ref|ZP_00544591.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|67999379|gb|EAM86022.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Ehrlichia
           chaffeensis str. Sapulpa]
          Length = 590

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 303/596 (50%), Positives = 407/596 (68%), Gaps = 9/596 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACF 59
           M+ YRTH C  L    +   V LSGW++R R HG IIF+D+RDHYGITQ+V N  D+  F
Sbjct: 1   MNIYRTHLCDQLRKEHINQEVTLSGWIYRKRDHGKIIFVDLRDHYGITQLVFNEADNQNF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           ++   +R E V+ + G+V++R + TIN  + TG IE+  + + I   A+ LPL +   ++
Sbjct: 61  QLITHLRLESVITVKGIVVARDSSTINTAVSTGFIEVVVKHVIIEGEADPLPLNITSIQD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           YPE IR KYRFLDLRRD +  NI+ R++II+ +R  M A  FIE  TPILT+SSPEGARD
Sbjct: 121 YPEEIRLKYRFLDLRRDKVKNNIILRSKIISELRKSMEAMGFIEIQTPILTSSSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR++ G FYALPQAPQ +KQ+LM SGFD+YFQIAPCFRDED RSDR PGEFYQLD+
Sbjct: 181 YLVPSRIHHGKFYALPQAPQLFKQILMVSGFDKYFQIAPCFRDEDARSDRSPGEFYQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ N +E VL  VF +FSN  T+   F RI Y DA+  YG+DKPDLRNP+I+
Sbjct: 241 EMSFVSQEDVFNVIEPVLLNVFSKFSN-KTIDKEFPRISYHDAMLHYGSDKPDLRNPLII 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  S+F +F+   ++  G  V AIPA     N R+F D   E+A++ G  GL Y
Sbjct: 300 QDVTEIFRDSQFNIFNS--NIKQGMVVRAIPAPNTATNPRSFFDNKIEFAKTLGAQGLGY 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D     +  GP+AK L+      I+   ++Q GDS FFI+    K    A + R 
Sbjct: 358 ITFNDD----FSAKGPIAKFLDEERLNRIKSICNLQPGDSVFFISETEDKATELAGEVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL +I  + F FCWI+DFP+++++++EK I+F HNPF+MPQGG+E+L   + L I 
Sbjct: 414 LLGKELNLIEKDTFRFCWIIDFPYFKYDKKEKSINFFHNPFSMPQGGLEALNNQNPLDIL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG EI+SG IRNH  ++M +AFS  G +KE+V+ +F  L RAF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIEISSGAIRNHKLDIMYKAFSIAGYTKEMVDQKFNSLTRAFKFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA GIDR+VMLL  A N+REV  FP++Q+  DLLM +PS +  E L+ L L I + 
Sbjct: 534 IAPGIDRMVMLLADATNIREVICFPLNQSGEDLLMSAPSEIDKEHLKLLSLSITKK 589


>gi|332364047|gb|EGJ41825.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 584

 Score =  611 bits (1575), Expect = e-172,   Method: Composition-based stats.
 Identities = 229/597 (38%), Positives = 342/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD
Sbjct: 119 VNDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E    + VS  F R+ YDDA+  YG DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGID-VSLPFPRMKYDDAMALYGVDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T+     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTDLVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L    T  +   L +++ D   F+A       +     R  
Sbjct: 353 KVTDGE-----LAGPVAKFLT-ELTSQLTEALQLENNDLVLFVADTLEVANAALGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQGLEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS V V QL EL L++  + +
Sbjct: 527 ALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVPVAQLEELSLQVEAHEE 583


>gi|15892110|ref|NP_359824.1| aspartyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|15619236|gb|AAL02725.1| asparaginyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 615

 Score =  610 bits (1574), Expect = e-172,   Method: Composition-based stats.
 Identities = 302/605 (49%), Positives = 413/605 (68%), Gaps = 10/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 14  MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 73

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  + S A+ LP  +  E++
Sbjct: 74  EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 133

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 134 APEESRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEGARD 193

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 194 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 253

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++       F+ I Y++++ +YG+DKPDLRNPII+
Sbjct: 254 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 313

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTE F  S+F +F + +           P K     R+F D+M E+A S+G  GL YI
Sbjct: 314 ADVTEIFRDSDFTIFRENIKKGSIVRAIPAP-KAAALPRSFFDKMIEFAISEGAGGLGYI 372

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +    S      GPV K L+    E+++    + +GD+ FF +    K    A   R  
Sbjct: 373 QF----SETGEAKGPVVKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRIR 428

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDLL 475
           + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +LL
Sbjct: 429 LGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEELL 488

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G PP
Sbjct: 489 ELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAPP 548

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  + 
Sbjct: 549 HGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPSA 608

Query: 596 KKILK 600
           +K  +
Sbjct: 609 RKNAE 613


>gi|194366904|ref|YP_002029514.1| aspartyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|238693500|sp|B4ST40|SYD_STRM5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|194349708|gb|ACF52831.1| aspartyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 583

 Score =  610 bits (1574), Expect = e-172,   Method: Composition-based stats.
 Identities = 222/591 (37%), Positives = 334/591 (56%), Gaps = 12/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV    D+   F +A 
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNQGGVCFIDLRDHEGIVQVTVEVDNAEVFAVAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+  E VL ++G+V +R A  +N  + TG++E+ A  I +L+ A    LP        E 
Sbjct: 62  SLGYEDVLQVEGVVRARHA--VNDKMRTGKVEVIATAITVLNKAAP--LPFHAHENPGEE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +    R +++ ++R  +  + F +  TPILT ++PEGARDFLVP
Sbjct: 118 TRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDEKGFQDIETPILTKATPEGARDFLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLDME +F
Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V + D+ + +E+++RG+F+E  N   +  +F R+ + +A+RRYG+DKPDLR  + + +V 
Sbjct: 237 VRERDVQDFVEDMIRGIFKEVVNVE-LDASFPRMTWAEAMRRYGSDKPDLRIALELVDVA 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E   +SEF VF+   +   G         G   +R   D     A   G  GLAYI  ++
Sbjct: 296 ELVKNSEFPVFTGPANDADGRVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLAYI--KI 353

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G V+   P+ K  +  +  A+   +   +GD  FF AG   K   F    R    ++
Sbjct: 354 ADNGEVS--SPIQKFFSEESFAALVAHVGAGNGDIVFFGAGGYNKVSDFMGALRLKAGKD 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G++  + +   W+ DFP +EW+EEE++    H+PFT P     +    +  +  +  YD
Sbjct: 412 FGLV-ADGWAPLWVTDFPMFEWDEEEQRYVALHHPFTAPAVDDIADLRANARTAVSRGYD 470

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGGIA GI
Sbjct: 471 MVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIAFGI 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DRI  L+ G +++R+V  FP +    DL+  +PS +   QL E+ +++   
Sbjct: 531 DRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIVDAQLAEVHIQVRPK 581


>gi|157151663|ref|YP_001451308.1| aspartyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157076457|gb|ABV11140.1| aspartyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 584

 Score =  610 bits (1574), Expect = e-172,   Method: Composition-based stats.
 Identities = 236/597 (39%), Positives = 346/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACF 59
             R+   G +    VG  + L GWV R R  GG+IF+D+RD  GI Q+V NP+       
Sbjct: 1   MKRSMYAGRVRKEHVGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVSKDVM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A+S+RSE+V+ + G V++R  E  N  + TG +EL  Q +E+L+ A+  P  +    E
Sbjct: 61  ETAESLRSEFVIEVTGQVVAR--EQANDKLATGAVELHVQSLEVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  + I   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQADLI-TALGLEDKDMVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELDLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E+  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKELQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS V+ +QL EL L++  N K
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSPVAAKQLDELSLQVEVNEK 583


>gi|310658604|ref|YP_003936325.1| aspartyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308825382|emb|CBH21420.1| aspartyl-tRNA synthetase [Clostridium sticklandii]
          Length = 586

 Score =  610 bits (1574), Expect = e-172,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 339/595 (56%), Gaps = 12/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
             RTH CGDL    +   V L GWV R R  GG+IF+D+RD  GI Q+V +   D   FE
Sbjct: 1   MKRTHYCGDLRNEHINQEVVLMGWVQRARNLGGLIFVDLRDREGICQIVFDEEIDKQAFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  + SE+V+ I G+V  RS++  N+NI TG IE+ A  I+IL+ A   P+ +  + + 
Sbjct: 61  KASKIGSEYVISISGIVRERSSK--NSNIPTGDIEIFANSIDILNEANTPPIYIKDDDDV 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E++R KYR+LDLR+  + KN + R ++   +R  +  E FI+  TP+LT  +PEGARD+
Sbjct: 119 SENLRLKYRYLDLRKPKMQKNFILRHKVTQIVRNFLSQEGFIDVETPMLTKPTPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D E
Sbjct: 179 LVPSRVSNGKFYALPQSPQLFKQLLMVSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+ +D++  ME ++  VF+E  N         R+ YD+A+ R+G+DKPD+R    + 
Sbjct: 238 MSFVDMEDVMQIMERLIAKVFDEALNVKI-DLPLQRMTYDEAMSRFGSDKPDVRFGFEIV 296

Query: 301 NVTEHFVHSEFRVF-SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++TE      F VF +  +          I        R     + + A++ G  GLA+I
Sbjct: 297 DLTEEVKDCGFSVFETSAMEEGKSVRAININGYESNFTRKGITALEDVAKTYGAKGLAWI 356

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                   +     P++K +N      I  ++D + GD   F+A             R  
Sbjct: 357 KLT-----SEGVNSPISKFINDEAMNRILSKMDAKTGDLILFVADRDKIVFDSLGHVRID 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A++L ++  + ++  ++ +FP +E++E+  +    H+PFT P      L  ++   ++A
Sbjct: 412 AAKKLDLLKKDEYKLLYVTEFPQFEYDEDNNRYVAMHHPFTSPLDEDMELLESNPSKVRA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S++  + F+ +G S E   ++FG L  AF+ G PPHGGI
Sbjct: 472 KAYDMVLNGVELGGGSIRIHNSKIQEKMFTALGFSTEEAWDKFGFLLEAFKYGTPPHGGI 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR++MLL G +++REV  FP +QN    L  +PS      L ELG+ +++N
Sbjct: 532 AFGLDRLIMLLAGEESIREVIAFPKTQNASCPLTNAPSEADNTALLELGIGLLDN 586


>gi|326773284|ref|ZP_08232567.1| aspartate--tRNA ligase [Actinomyces viscosus C505]
 gi|326636514|gb|EGE37417.1| aspartate--tRNA ligase [Actinomyces viscosus C505]
          Length = 599

 Score =  610 bits (1574), Expect = e-172,   Method: Composition-based stats.
 Identities = 244/616 (39%), Positives = 339/616 (55%), Gaps = 34/616 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT + G L  SD+G  V L+GWV R R HGG+ F+D+RD  GI QVV        EIA  
Sbjct: 3   RTRNAGSLRASDIGQVVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVIR-----EEIAHD 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----Y 120
           +R+E+VL + G V +R     N N+ TG+IE+    +EIL+ +  LP  V    E     
Sbjct: 58  LRAEYVLAVTGEVSARPEGNANPNLPTGEIEVVVSDVEILNASAPLPFQVSDHAEDAGQV 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR+LDLRR  +   I  R ++  + R  + + +F+E  TP LT S+PEGARDF
Sbjct: 118 GEEARLRYRYLDLRRSAMQHAIRLRAKVSQAARRVLDSHDFVEIETPTLTRSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 178 LVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD++   E+VLR V+        +     R+ Y DA+ RYG+DKPDLR    + 
Sbjct: 237 MSFVEQDDVIAVAEDVLREVWALI--DYELPTPIARMTYRDAMERYGSDKPDLRFGCELV 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T++F  + FRVF         Y    +   G   +R   D   EWA+ +G  GLAY+ 
Sbjct: 295 DLTDYFKDTTFRVFQNP------YVGAVVMPGGASQSRRTFDAWQEWAKQRGAKGLAYVT 348

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +   GPVAK++     E +        GD  FF AG      +    AR  I
Sbjct: 349 --VAEDGTLG--GPVAKNITDAEREGLAQAAGAAPGDCIFFAAGPVDSSRALLGAARLEI 404

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGMESLK 470
            +  G+I+ N + F W++D P ++ + E K               H+ FT P+       
Sbjct: 405 GKRCGLIDDNEWSFVWVVDAPLFKPSAEAKADGDVALGKSAWTAVHHAFTSPKPECLETF 464

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  S  A+ YD+VCNG EI  G IR H S+V  + F+ +GI ++  + +FG L  AF+
Sbjct: 465 DTDPGSALAYAYDIVCNGNEIGGGSIRIHRSDVQERVFNVMGIGEQEAQEKFGFLLDAFK 524

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DRIV LL  A ++R+V  FP S    D L  +P+ ++ EQ +E G  
Sbjct: 525 FGAPPHGGIAFGWDRIVSLLTRADSIRDVIAFPKSGGGFDPLTEAPAPITPEQRKEAG-- 582

Query: 591 IVENPKKILKISVTTI 606
           +   P    K  V   
Sbjct: 583 VDAEPDTADKPEVANK 598


>gi|260772664|ref|ZP_05881580.1| aspartyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611803|gb|EEX37006.1| aspartyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 591

 Score =  610 bits (1574), Expect = e-172,   Method: Composition-based stats.
 Identities = 220/595 (36%), Positives = 326/595 (54%), Gaps = 7/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD      IA 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMVDVLNIAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+ + + G V +R    IN ++ TG +E+ A+ ++I++ +E   LP+   ++  E 
Sbjct: 62  QVRNEFCIKLTGEVRARPDSQINQDMATGAVEVLAKDLQIINRSE--ALPLDSNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDGHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    E ++R ++ E  + +     F  + Y +AIRR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTADQVRAVTEQMIREMWLELLDVDLGE--FPVMPYSEAIRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G   +R   D    +    G  GLA++    
Sbjct: 297 DLLKDVDFKVFSGPANDEKGRVAALRVPGGAALSRKQIDEYTAFVAIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN    + I  R   ++GD   F A +           R  + ++
Sbjct: 357 RAAGLEGIQSPVAKFLNAEIVQTIMERTQAENGDIILFGADNANVVAEAMGALRLKVGKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I N   +   W++DFP +E + E   +   H+PFT P             +  +  YD
Sbjct: 417 LAITNGATWAPLWVVDFPMFETDSE-GNVAAMHHPFTAPLNMTAEELKASPSNALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H + +    F  +GI +     +FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHDATMQSAVFDLLGIDEHEQRLKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           DR+VMLL G +N+R+V  FP +     LL  +PS  +   L EL + +    +K 
Sbjct: 536 DRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSVANPAALEELAIAVTAAKEKA 590


>gi|291279933|ref|YP_003496768.1| aspartyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754635|dbj|BAI81012.1| aspartyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 599

 Score =  610 bits (1574), Expect = e-172,   Method: Composition-based stats.
 Identities = 235/589 (39%), Positives = 348/589 (59%), Gaps = 10/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH+CG+L ++++   V L GWV + R HGG+IF+D+RD  GITQVV NP+      + A
Sbjct: 10  RTHTCGELNINNLNEEVILMGWVQKRRDHGGVIFVDLRDREGITQVVFNPEYNENAHKKA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +R+E+V+ + G+V  R   T N  + TG+IE+   +++IL+ ++ LP  +       E
Sbjct: 70  EELRTEYVIAVKGVVSKRPEGTENPKLKTGEIEVMVSELKILNTSKVLPFTLDEYSNVGE 129

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  L +N++ R  ++ ++R  +  + F++  TP LT S+PEGARD+LV
Sbjct: 130 DIRLKYRYLDLRRRPLQRNLILRHNLVRTIREFLYKKGFLDIETPFLTKSTPEGARDYLV 189

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ +KQLLM SGFD+YFQI  CFRDED R+DR P EF QLDMEMS
Sbjct: 190 PSRVNPGKFYALPQSPQMFKQLLMISGFDKYFQIVKCFRDEDLRADRQP-EFTQLDMEMS 248

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++++D+++ +E +   +F++          F R+ Y +A+ +YG D PD R  + +  +
Sbjct: 249 FIDREDLMDLIEEMFVEIFDKVLGLKI-ERPFPRMSYTEAMEKYGHDAPDTRFEMFLKTI 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
                   F+VF+  +      +       G   +R   D + ++  S G  GLAYI   
Sbjct: 308 NNLVDGCGFKVFADAVKDGGVVKAINAK-GGAKFSRKEIDELTDFVCSLGAKGLAYIKIN 366

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D         P+ K L    T +I   ++ + GD  FF AGD      + +  R  + +
Sbjct: 367 ED-----GLQSPIIKFLGEDVTNSIVKEMNGEVGDIIFFGAGDEKTVNLYMSKLRLLLGK 421

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+I+ N + F W+ DFP  EW+EEEK+    H+PFT P      L   D   I+A  Y
Sbjct: 422 KLGLIDENKYSFTWVTDFPLLEWDEEEKRYVAMHHPFTSPVDEDIPLFDTDPGKIRAKAY 481

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG EI  G IR H S+V  + FS +G+++E  E +FG    A + G PPHGGIA G
Sbjct: 482 DLVLNGSEIGGGSIRIHRSDVQEKMFSVLGLTEEEREYKFGFFIEALRYGTPPHGGIAFG 541

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IDRI  +   A+++R+V  FP +Q   DL+  +PS V  +QL+EL +++
Sbjct: 542 IDRIASIFAKAESIRDVIAFPKTQKATDLMCDAPSFVDEKQLKELFIKV 590


>gi|119944470|ref|YP_942150.1| aspartyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166225379|sp|A1SST6|SYD_PSYIN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119863074|gb|ABM02551.1| aspartyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 592

 Score =  610 bits (1574), Expect = e-172,   Method: Composition-based stats.
 Identities = 213/596 (35%), Positives = 337/596 (56%), Gaps = 8/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG++  + +G  ++L GW+++ R  GG+IFLD+RD  GI QV  + D+     +A 
Sbjct: 2   RTMYCGEVTEAVLGQEIQLVGWINKQRDLGGVIFLDMRDRAGIVQVFFDADTPIATALAT 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +VR+E+ + I GLV +R    +N ++ TG IE+   ++EIL+ +E   LP+   ++  E 
Sbjct: 62  TVRNEFCIQIKGLVRARPEGQVNKDMTTGGIEILGLELEILNRSEP--LPLDSNQQNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  + K +  R ++ + +R  +  ++F++  TPILT ++PEGARD+LVP
Sbjct: 120 QRLRYRYLDLRRPEMAKRMQFRAKVSSFVRRFLDDQDFLDVETPILTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRTHKGKFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D ++   E ++  +F+E  N +    NF ++ Y +A+RR+G+DKPDLR    +++V 
Sbjct: 239 MNADQVMEISEEMIVKLFKEMLNVD--LGNFPKMTYAEALRRFGSDKPDLRIDFELYDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +             G   +R   D   ++    G  GLA++    
Sbjct: 297 DLMKDVEFNVFSGPANDPDSRVAVICVPGGAKLSRKNIDEYGKFVTIYGAKGLAWMKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK LN      + +R   +DGD   F A             R  +AQ+
Sbjct: 357 VAKGLEGVQSPVAKFLNEEIVTELLIRTGAKDGDIILFGADKSNIVSEAIGALRLKVAQD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG++  + ++  W++DFP +E  ++   +   H+PFT P G        + +   +  YD
Sbjct: 417 LGLVK-DQWKPLWVIDFPMFEPLDD-GGLTPLHHPFTAPIGLTVEELEANPVGAISNAYD 474

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  ++    F  + IS E  E++FG L  A + G PPH G+A G+
Sbjct: 475 MVLNGCELGGGSVRIHKQDMQAAIFRILKISDEEAEDKFGFLLEALKYGAPPHAGLAFGL 534

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           DR+VML+ G  ++R+V  FP + +    L  +PS  +   L EL + +V +PKK++
Sbjct: 535 DRLVMLMTGTSSIRDVIAFPKTASAACPLTNAPSFANPAVLAELNVAVVADPKKVI 590


>gi|212219277|ref|YP_002306064.1| aspartyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|212013539|gb|ACJ20919.1| aspartyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 610

 Score =  610 bits (1574), Expect = e-172,   Method: Composition-based stats.
 Identities = 229/593 (38%), Positives = 339/593 (57%), Gaps = 5/593 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH    +  S +   + L GWVHR R HGG+IF+D+RD  G+ QVV NP +S  F++A+
Sbjct: 22  RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 81

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+V+ + G V  R   T+N +I +G++E++A  I +L+ ++ LP  +   +E  E 
Sbjct: 82  SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 141

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R+LDLRR  + + +  R+ II  +R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 142 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 201

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +K++LM +GFDRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 202 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 260

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ DI   ME ++R +F  F N   + + F RI YD+AI+ YGTD+PDLRNP+ + +VT
Sbjct: 261 VEEKDIQQLMETMIRHLFSTFLNV-PLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 319

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF +  +   G        KG   +R   D   ++    G  GLAYI    
Sbjct: 320 DLMKSVEFKVFKEPANNPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVEN 379

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G      P+ K L       I  R   Q GD  FF A             R+ +  +
Sbjct: 380 IDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFFGADKAKIVNESLGALRDRLCAD 439

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     ++  W++DFP ++  E+       H+PFT  Q         +   + +  YD
Sbjct: 440 LNLY-EGQWKPVWVVDFPMFDR-EDVGDWQALHHPFTALQETDPEKVIANPGDVLSRAYD 497

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR +   +       +GISKE+ E +FG L  A Q G PP GGIA G+
Sbjct: 498 MVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLGGIAFGL 557

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+V ++ GA ++R+V  FP +Q     L  +P+ V   QL  LGL++ ++ K
Sbjct: 558 DRLVAIMTGASSIRDVISFPKTQTAQCPLTNAPTQVETLQLETLGLKVSKHRK 610


>gi|288906391|ref|YP_003431613.1| aspartyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|306832438|ref|ZP_07465591.1| aspartate--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325979405|ref|YP_004289121.1| Aspartyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288733117|emb|CBI14698.1| aspartyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|304425478|gb|EFM28597.1| aspartate--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325179333|emb|CBZ49377.1| Aspartyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 582

 Score =  610 bits (1574), Expect = e-172,   Method: Composition-based stats.
 Identities = 229/595 (38%), Positives = 341/595 (57%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             RT   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    ++ 
Sbjct: 1   MKRTMYAGRVRSEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSSDVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+R+E+V+ + G V  R  E  N N+ TG +EL    + +L+ A+  P  +  + E
Sbjct: 61  TTAESLRNEFVIEVTGEVAQR--EQENKNLPTGAVELKVSALTVLNTAKTTPFEIKDDVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  +  N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDENRLRYRYLDLRRPKMLNNFKLRAKVTHSIRNYLDELEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+DM
Sbjct: 179 YLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDM 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   DI +  E ++  V ++    + V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSDQDIQDITEGMIAKVMKDTKGID-VTLPFPRMSYDDAMNNYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTEVVKDVDFKVFSQA----PVVKAIVVKGNADKYSRKNIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +           GPVAK L  +  + +   L +++ D   F+A       +     R  
Sbjct: 353 KFTDGA-----ITGPVAKFLTSIE-DKLTASLQLEENDLVLFVADTLEVANNTLGALRTR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +++ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IAKELDMVDNSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEESAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E+  + F  +G + E   ++FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKELQERMFKALGFTAEEANDQFGFLLEAMNYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L I  N
Sbjct: 527 AIGLDRFVMLLAGEDNIREVIAFPKNNKAADPMTQAPSLVSDKQLDELALAIENN 581


>gi|257055552|ref|YP_003133384.1| aspartyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256585424|gb|ACU96557.1| aspartyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 590

 Score =  610 bits (1574), Expect = e-172,   Method: Composition-based stats.
 Identities = 247/596 (41%), Positives = 338/596 (56%), Gaps = 21/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L V  VG  V L+GWV R R HGG+IF+D+RD  G+ Q+V        E A +
Sbjct: 3   RTHDAGTLRVEHVGQTVTLTGWVARRRDHGGVIFIDLRDASGVAQIVFREGEMA-ERAHA 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ L + G V  R     N  I TG IE+   ++E+LS +  LP P+    E  E  
Sbjct: 62  LRSEYCLKVTGEVARRPEGNENPEIPTGDIEVFVTELEVLSESAALPFPIDERLEVGEET 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR+   + +  R+ +    R  +    FIE  TP +T S+PEGARDFLVP+
Sbjct: 122 RLRYRYLDLRREGPARIMRLRSEVNRVAREVLHRHGFIEVETPTMTRSTPEGARDFLVPA 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 182 RLKPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E+VL  +++    G  VS  F R+ Y +A+ +YGTDKPDLR  + +  +T+
Sbjct: 241 EQDDVMALAEDVLSALWK--LAGVEVSTPFRRMSYAEAMSKYGTDKPDLRFGLELVELTD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    +   G    R   D   EWAR +G  GLAY+   + 
Sbjct: 299 FFADTPFRVFQAP------YVGAVVMPGGADQPRRTLDAWQEWARQRGHKGLAYVL--VG 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L+      +      + GD  FF AG P         AR  IA  L
Sbjct: 351 EDGTLG--GPVAKNLSEHERANLVEAAGAKPGDCIFFAAGKPKDARQLLGMARVEIAHRL 408

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE-------KKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           G+I+ N + F W++DFP +E  +E         K    H+ FT P          D  + 
Sbjct: 409 GMIDENAWSFVWVVDFPMFEAADESDDVNVGGGKWTALHHAFTSPAPEWIDKFEQDPGNA 468

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+VCNG EI  G IR H ++V  + F  +G+S+E  +++FG L  AFQ G PPHG
Sbjct: 469 LAQAYDIVCNGHEIGGGSIRIHRADVQKRVFEVMGLSEEEAQDKFGFLLDAFQYGPPPHG 528

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G+A G DRIVMLL GA+++REV  FP +    D L G+P+ ++ +Q +E G+    
Sbjct: 529 GVAFGWDRIVMLLAGAESLREVIAFPKTGGGYDPLTGAPAPITAQQRKEAGVDAKP 584


>gi|238063887|ref|ZP_04608596.1| aspartyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237885698|gb|EEP74526.1| aspartyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 606

 Score =  610 bits (1573), Expect = e-172,   Method: Composition-based stats.
 Identities = 230/590 (38%), Positives = 339/590 (57%), Gaps = 16/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  +D G+ V L+GWV R R HGG+IF+D+RD  GI QVV        E A +
Sbjct: 3   RTHDAGSLRATDAGTTVTLAGWVARRRDHGGVIFVDLRDGSGIVQVVFR-----EEDAHA 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  + TG+IE++A  +E+LS A  LPLPV  + E  + I
Sbjct: 58  LRNEFCVKVTGEVTRRPEGNENPELPTGEIEVTASALEVLSEAAPLPLPVDDQVEAGDDI 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR    + +  R+R     R  +   +F+E  TP LT S+PEGARDFLVP 
Sbjct: 118 RLKYRYLDLRRGGPARAMRLRSRANQLARGVLHDRDFLEIETPTLTRSTPEGARDFLVPV 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 178 RLQPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +DD+++  E ++  ++ + +          RI + DA+ RYG+DKPDLR  + +  +T+
Sbjct: 237 TEDDVIDLGEAIVSALWSDLAGYEI-PRPIPRITWHDAMARYGSDKPDLRYGVELTELTD 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +   + FRVF+  +          +   G G  R   D   +WA+++G  GLAY+   + 
Sbjct: 296 YLRGTAFRVFAGAIDAGGYV-GAVVMPGGAGQTRKELDGWQDWAKARGAKGLAYV---VL 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHIAQE 423
           ++   A  GPVAK+L+  +   +   +  + GD+ FF  + +  +       AR  IA+ 
Sbjct: 352 DAETGAPRGPVAKNLSEEHLAGLADAVGAKPGDAVFFAASTETREAQELLGAARIEIAKR 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEE----KKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
             +I+ + + FCW++D P +E   ++          H+PFT P                A
Sbjct: 412 AKLIDESAWTFCWVVDAPMFERTSDDSGGAGGWTAVHHPFTSPNAEWVDRFEEAPDRALA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           + YD+VCNG EI  G IR H  +V  + F  +GI+ E  +++FG L  AF+ G PPHGGI
Sbjct: 472 YAYDIVCNGNEIGGGSIRIHRGDVQQRVFDLLGITPEEAQDKFGFLLEAFKYGAPPHGGI 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G DR+ MLL GA ++REV  FP ++   D L G+P+ ++ +Q  E G+
Sbjct: 532 AFGWDRVCMLLAGADSIREVIAFPKTRGGFDPLTGAPTPITAQQRAEAGI 581


>gi|225548085|ref|ZP_03769370.1| hypothetical protein RUMHYD_00064 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040761|gb|EEG51007.1| hypothetical protein RUMHYD_00064 [Blautia hydrogenotrophica DSM
           10507]
          Length = 599

 Score =  610 bits (1573), Expect = e-172,   Method: Composition-based stats.
 Identities = 232/594 (39%), Positives = 342/594 (57%), Gaps = 11/594 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFE 60
           +R+H C ++     GS V L GWV + R  GGI+F+D+RD  G+ Q++      D + FE
Sbjct: 9   HRSHRCAEVTKEMTGSEVTLMGWVQKSRNKGGIVFVDLRDRSGLIQLIFENGSIDESGFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ + G V +RS   +N N++TG+IE+  +++ ILS AE  P P+    + 
Sbjct: 69  KAGKLRSEFVIAVVGTVEARSG-AVNPNMLTGEIEIRVRELRILSEAETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  L +N++ R+++    R     E F+E  TP+LT S+PEGARD+
Sbjct: 128 KDEVRLKYRYLDLRRPDLQRNLMLRSQVATLTRQFFAQEGFLEIETPMLTKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QGSFYALPQ+PQ +KQLLM SG+DRY QIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHQGSFYALPQSPQIFKQLLMCSGYDRYIQIARCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+L+  E  L  +F+E      VS    RI + +A+ R+G+DKPD+R  + + 
Sbjct: 247 LSFVDVDDVLDVNERFLAFLFKEVLGVE-VSLPIQRITWQEAMDRFGSDKPDMRFGMELQ 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E     EF VF   L             +G    R   D++ E+A+  G  GLAY+ 
Sbjct: 306 DVSEVVKDCEFAVFKGALENGGSVRGINAKGQG-KMPRKKIDKLVEFAKGYGAKGLAYLA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D           AK +       +   +  + GD   F A             R  +
Sbjct: 365 VNEDG----TYKSSFAKFMTEEEMGGLVKAMKGEPGDLLLFAADKNKLVYDVLGALRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +++ +++ N F F W+ +FP  EW+EEE++    H+PFTM       L   +   ++A 
Sbjct: 421 GRQMELMDKNEFRFVWVTEFPLLEWSEEEERYTAMHHPFTMLMDEDLPLLDTEPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R   ++V  + F  +G +KE    +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIFQNDVQERMFEVLGFTKEAAYEQFGFLLNAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+VML+ GA ++REV  FP  ++   L+  +PS VS  QL EL L+I + 
Sbjct: 541 YGLDRLVMLMAGADSIREVIAFPKVKDASCLMSEAPSAVSEAQLEELALKIAKE 594


>gi|114566350|ref|YP_753504.1| aspartyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318569|sp|Q0AYS1|SYD_SYNWW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|114337285|gb|ABI68133.1| aspartyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 586

 Score =  610 bits (1573), Expect = e-172,   Method: Composition-based stats.
 Identities = 238/594 (40%), Positives = 349/594 (58%), Gaps = 10/594 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             RTH+  +L +  VG  V L+GWV   R HGG+IF+D+RD  GI Q+V +P+     F 
Sbjct: 1   MKRTHNATELDIHLVGREVMLNGWVDTRRDHGGLIFVDLRDRSGIIQLVFSPEVKEEAFH 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSE+V+ + G +  R   T N N+ TG++E+  + IE+LS A+  P  +  + + 
Sbjct: 61  LAEQIRSEYVIAVRGKLSLRPEATENPNLKTGKVEVYVEDIEVLSPAKTPPFYIENDIDV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E++R KYR+LDLRR  +  N++ R R++  MR  + +  FIE  TPILT S+PEGARD+
Sbjct: 121 DENLRLKYRYLDLRRPEMRDNLLLRHRVVKCMRDFLDSRGFIEIETPILTKSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQ+LM +G ++YFQIA CFRDED R+DR P EF QLDME
Sbjct: 181 LVPSRVHPGEFYALPQSPQIFKQILMVAGMEKYFQIARCFRDEDLRADRQP-EFTQLDME 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+++DI+  +E ++  +F + +    +   F R+ YDDA+  YG+DKPDLR  + + 
Sbjct: 240 MSFVDEEDIIVLVEEMMAEIFFKAAG-KVIRTPFPRLAYDDAMINYGSDKPDLRFGLEIV 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            ++E   +++F+VF+  L              G    R   D +   A   G  G+A+I 
Sbjct: 299 ELSEMLQNTQFKVFASALQSGGVVRALNAKGCG-SFTRREIDALGAMAVENGAKGMAWIL 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + +E        P+ K L+    E I +    + GD   F A             R  +
Sbjct: 358 VQENE-----LRSPITKFLSEEEIEQILMTTGAEAGDLILFGADQAEIVARVMGILRLEL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++ G+I      F W+ DFP  E++EEEK+    H+PFT P+     +  ++   +KA 
Sbjct: 413 GRKKGLIAEEELNFVWVTDFPLLEYDEEEKRYQAKHHPFTSPRLEDIEIMDSEPGRVKAR 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H  E   + FS +G+S+E   ++FG +  AF+ G PPHGGIA
Sbjct: 473 AYDLVLNGTELGGGSIRIHRREWQEKMFSVLGMSQEEARDKFGFMLEAFEYGTPPHGGIA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR++MLL G  +VR+V  FP +Q+    +  +PSTVS  QLREL LRI E 
Sbjct: 533 FGVDRLLMLLAGRNSVRDVMAFPKTQSASCPMTEAPSTVSARQLRELALRIREK 586


>gi|258404152|ref|YP_003196894.1| aspartyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257796379|gb|ACV67316.1| aspartyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 602

 Score =  610 bits (1573), Expect = e-172,   Method: Composition-based stats.
 Identities = 232/595 (38%), Positives = 339/595 (56%), Gaps = 14/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTH    L   ++G  V L GWV   R HGG+IF+D+RD  G+TQ+V +P+        
Sbjct: 17  KRTHHLAALTSENLGQEVCLMGWVQFRRDHGGLIFIDLRDRRGLTQIVFSPEINEQAHAE 76

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +R E+VL + G V  R    +N  + TG+IE+   + ++L+VA+  P  +    E  
Sbjct: 77  AHVLRPEYVLAVKGTVRERPEGMVNPRLATGEIEVVVTEWKLLNVAQTPPFVLEERAEVS 136

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R  +R+LD+RR  L  N+V R +   ++R  +   +F+E  TP+LT S+PEGARDFL
Sbjct: 137 ENVRLAHRYLDMRRPGLGSNLVVRHKATQAIRNYLDQLDFLEIETPVLTKSTPEGARDFL 196

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+NQG FYALPQ+PQ +KQLLM  G DRY+QI  CFRDED R+DR P EF Q+DMEM
Sbjct: 197 VPSRLNQGEFYALPQSPQLFKQLLMYGGMDRYYQIVRCFRDEDLRADRQP-EFTQIDMEM 255

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF E++D++   E ++  VF +    + + N   R+ Y +A+ +YG D+PD R  +++  
Sbjct: 256 SFAEEEDVMGVAEGLVAEVFAKTLGVD-LPNPVPRMTYAEAVDKYGLDRPDTRFELLLEE 314

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VTE    SEF++F++   V           +G    R   D + E+ +  G  GLA+I  
Sbjct: 315 VTELVRGSEFKLFAQAEMVK-----ALRVPQGSELTRKEIDDLTEFVKIYGAKGLAWIKI 369

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D         P+AK L+     A+   L +Q GD  FF AG      +     R  + 
Sbjct: 370 KDD-----GWQSPIAKFLSDAECTALTDHLGLQSGDIVFFQAGGADMVNTALGQLRLRLG 424

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   ++  + F+  WI DFP  EW++E ++    H+PFT  +    +    D  ++ A  
Sbjct: 425 ERFDLVPADRFDLVWITDFPLMEWDDEAQRWVARHHPFTATREEDIAAMLEDPGAVIARS 484

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G +R H SE   + F  +GI +   E +FG L RA + G PPH GIA 
Sbjct: 485 YDLVLNGNEIGGGSVRIHRSEDQWRMFDALGIDRAEAEEKFGFLLRALEYGAPPHAGIAF 544

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR++M+L GA+++R+V  FP +Q    LL  +PS V+  QLRELGLR+ E  K
Sbjct: 545 GLDRLIMILCGAESIRDVIAFPKTQKATCLLTDAPSAVASTQLRELGLRLREKKK 599


>gi|262283660|ref|ZP_06061425.1| aspartyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262260717|gb|EEY79418.1| aspartyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 584

 Score =  610 bits (1573), Expect = e-172,   Method: Composition-based stats.
 Identities = 235/597 (39%), Positives = 345/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACF 59
             R+   G +    VG  + L GWV R R  GG+IF+D+RD  GI Q+V NP+       
Sbjct: 1   MKRSMYAGRVRKEHVGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVSKDVM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A+S+RSE+V+ + G V++R  E  N  + TG +EL  Q +E+L+ A+  P  +    E
Sbjct: 61  ETAESLRSEFVIEVTGQVVAR--EQANDKLATGAVELHVQSLEVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPV K L  +  + I   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVVKFLTAIQADLI-TALSLEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+   F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNGKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS V+ +QL EL L++  N K
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSPVATKQLDELNLQVEVNEK 583


>gi|325697963|gb|EGD39846.1| aspartate--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 584

 Score =  610 bits (1573), Expect = e-172,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 344/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E
Sbjct: 61  TTAESLRSEFVLDVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD
Sbjct: 119 VNDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E    + VS  F R+ YDDA+  YG DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGID-VSLPFPRMKYDDAMALYGVDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                   N    GPVAK L  + T  +   L +++ D   F+A       +     R  
Sbjct: 353 KV-----ANGELAGPVAKFLTDL-TSQLTEALQLKNNDIVLFVADTLEVANAALGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LAKELDLIDADTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAVEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++  + +
Sbjct: 527 ALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQVEAHEE 583


>gi|34580859|ref|ZP_00142339.1| asparaginyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262244|gb|EAA25748.1| asparaginyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 612

 Score =  610 bits (1573), Expect = e-172,   Method: Composition-based stats.
 Identities = 302/605 (49%), Positives = 411/605 (67%), Gaps = 10/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 11  MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 70

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  + S A+ LP  +  E++
Sbjct: 71  EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 130

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI  R++II  +R  M A  F E  TPILTASSPEGARD
Sbjct: 131 APEESRLKHRFLDLRREKLHNNITLRSQIIAHIRHLMTASGFTEFQTPILTASSPEGARD 190

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 191 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 250

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++       F+ I Y++++ +YG+DKPDLRNPII+
Sbjct: 251 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 310

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTE F  S+F +F + +           P K     R+F D+M E+A S+G  GL YI
Sbjct: 311 ADVTEIFRDSDFTIFRENIKKGSIVRAIPAP-KAAALPRSFFDKMIEFAVSEGAGGLGYI 369

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +    S      GPV K L+    E+++    + +GD+ FF +    K    A   R  
Sbjct: 370 QF----SETGEAKGPVVKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRIR 425

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDLL 475
           + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +LL
Sbjct: 426 LGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEELL 485

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G PP
Sbjct: 486 ELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAPP 545

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  + 
Sbjct: 546 HGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPSA 605

Query: 596 KKILK 600
           +K  +
Sbjct: 606 RKKAE 610


>gi|302336856|ref|YP_003802062.1| aspartyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301634041|gb|ADK79468.1| aspartyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 594

 Score =  610 bits (1573), Expect = e-172,   Method: Composition-based stats.
 Identities = 245/598 (40%), Positives = 359/598 (60%), Gaps = 11/598 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF-- 59
           +  RT +CG+L  S VG  V L+GWVHR R HGGI+F+++RD YGITQVV + D++    
Sbjct: 3   NMKRTATCGELNSSRVGETVTLNGWVHRNRDHGGILFINLRDRYGITQVVIDEDASAPLK 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E AK ++ E+ + + G+V  R  E +N ++ TG+IE++A +IEIL+  + LP  +  + +
Sbjct: 63  EKAKELKFEYCIAVVGIVRRRPDEMVNKDMNTGEIEVAASQIEILTKCDVLPFMIDEKSD 122

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLR  ++ + I  RT +  + R  +I + F+E  TP +  S+PEGARD
Sbjct: 123 AKEDLRLKYRYLDLRSFSMQRKIRLRTDVTFAAREFLIGKGFMEIETPTMIKSTPEGARD 182

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQ+PQ YKQ+LM SGFDRYFQIA CFRDED R DR P E  Q+DM
Sbjct: 183 FLVPSRIHAGKFYALPQSPQLYKQILMVSGFDRYFQIAHCFRDEDARGDRQP-EHTQIDM 241

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV +DD+   +E ++  +F++      +   F R+ YDDA+ R+G+DKPDLR  + M
Sbjct: 242 EMSFVSKDDVFEVVEGMMSHIFDKTLGVK-LEIPFQRLPYDDALNRFGSDKPDLRFGLEM 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             V E    S F  F  +++     +   + +   G +R     + + A+  G  GLA++
Sbjct: 301 KTVDELASKSGFNAFKSVIAEGGCVK-ALVASGCAGYSRKQISELEDAAKVYGAKGLAWM 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G     G V+K       + +   L+ Q+GD    +       C+     R+ 
Sbjct: 360 KV-----GESGIEGGVSKFF-DGIADELLASLEAQEGDLILMVGDKWNVACTSLGAVRSK 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + ++LG+I    F FCWI+DFP +E+NEEE++ + AH+ FTMPQ         +  ++K 
Sbjct: 414 LGKDLGLIEAGTFRFCWIVDFPLFEYNEEEQRWEAAHHMFTMPQEQYLDTLEENPGAVKG 473

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLVCNGFE+ASG IR H  E+  + F+ VG S E  ENRFG L  AF+ G PPHGGI
Sbjct: 474 DLYDLVCNGFELASGSIRIHDPEIQKRIFNIVGFSSEEAENRFGFLLNAFRYGPPPHGGI 533

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VM++ G  +++EV  FP +      +  SPS V  +QL+ L +++    K+
Sbjct: 534 APGLDRLVMIMAGENSIKEVIAFPKNNQAYSPMDDSPSLVDEDQLKMLHIKLDMPEKE 591


>gi|210616235|ref|ZP_03291015.1| hypothetical protein CLONEX_03236 [Clostridium nexile DSM 1787]
 gi|210149901|gb|EEA80910.1| hypothetical protein CLONEX_03236 [Clostridium nexile DSM 1787]
          Length = 602

 Score =  610 bits (1573), Expect = e-172,   Method: Composition-based stats.
 Identities = 228/597 (38%), Positives = 344/597 (57%), Gaps = 11/597 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFE 60
            R+H C +L   ++G  V + GWV + R  GGI+F+D+RD  G+ Q++          FE
Sbjct: 9   KRSHRCAELSKVNIGETVTVMGWVQKNRNKGGIVFVDLRDRSGLLQLIFENGSVSEEDFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+   G V +RS   +N N+ TG+IE+  +++ ILS +E  P P+    + 
Sbjct: 69  KAGKLRSEFVIAAVGTVEARSG-AVNENLATGEIEIRVKELRILSESETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR LDLRR  L +N++ R++     R  +  E F+E  TP+L  S+PEGARD+
Sbjct: 128 KEELRLKYRVLDLRRPDLQRNLMMRSKAATLTRQFLAEEGFLEIETPMLIKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G+FYALPQ+PQ +KQLLM +G+DRYFQI  CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGNFYALPQSPQIFKQLLMCAGYDRYFQIVKCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E +L  +F+E      VS    R+ + +A+ R+G+DKPD+R  + + 
Sbjct: 247 LSFVDVDDVIDVNERLLAKMFKEILGIE-VSLPIQRMTWQEAMDRFGSDKPDIRFGMELT 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E     EF VF   L             +G    R   D++ + A+  G  GLAY+ 
Sbjct: 306 DVSEVVKDCEFVVFKNALENGGSVRGINAKGQG-AMPRKKIDKLVDLAKDFGAKGLAYVA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +  E G +      AK ++     A+   +D ++GD   F A           + R  I
Sbjct: 365 IQ--EDGTIK--SSFAKFMSEEEMAALVKAMDGENGDLLLFAADKNQVVWDVLGNLRLEI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +++ N ++F WI +FP  EWNEE  +    H+PFTMP      L   D   ++A 
Sbjct: 421 ARQLELLDKNEYKFLWITEFPLLEWNEEAGRYTAMHHPFTMPMEEDLHLIDTDPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R    E+  + F  +G +KE  + +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTEIGGGSVRIFNQEIQSKMFEVLGFTKEQAQEQFGFLLNAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML+    ++R+V  FP  ++  DL+  +PS V  +QL EL L I +  ++
Sbjct: 541 YGLDRLVMLMAKEDSIRDVIAFPKVKDASDLMTEAPSGVDQKQLDELCLAITKKEER 597


>gi|158337540|ref|YP_001518715.1| aspartyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|189082084|sp|B0CF01|SYD_ACAM1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|158307781|gb|ABW29398.1| aspartyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 595

 Score =  610 bits (1573), Expect = e-172,   Method: Composition-based stats.
 Identities = 236/601 (39%), Positives = 360/601 (59%), Gaps = 17/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH C +L    VG  V L GWV R R HGG+IFLD+RD  G+ Q+V++P+     +  A
Sbjct: 2   RTHYCSELRNDHVGERVTLCGWVDRRRDHGGVIFLDVRDRTGLIQIVSDPERTPEAYPQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP- 121
            ++R+E+V+ I G V  R  +++N  + TG++E+ A +IE+L+   +         +   
Sbjct: 62  DALRNEYVVRIHGEVSRRPDDSLNPRLPTGEVEIYADQIELLNAVHQQLPFQVSTADVES 121

Query: 122 --ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRRD +H+NI+ R R+I S+R  +   +NF++  TP+LT S+PEGAR
Sbjct: 122 VKEELRLKYRYLDLRRDRMHQNIMMRHRLIQSIRRYLEDQQNFVDIETPVLTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR N G ++ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRANPGEWFALPQSPQIFKQLLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ Q++I+   E+++R VF+   + + +   F ++ Y +A+ R+GTD+PD R  + 
Sbjct: 241 MEMSFMSQEEIIQLNEDLMRHVFKTLKDID-LPKTFPQMTYAEAMERFGTDRPDTRFDLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + NV++    S F+VFS  +      +V  IP      +         +   A + G  G
Sbjct: 300 LVNVSDLLEDSGFKVFSGAIKKGGQVKVLPIPDGNAKISNVRIKPGGDLFSEASAGGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI  R+ + G +  +G +  +L+   T  +  R   + G    F AG      +  + 
Sbjct: 360 LAYI--RVKDDGAIDTIGAIKDNLSPEQTAELLERTGAKPGHLLLFGAGPTEIVNASLSR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  +  E+ +I+ +  +  WI +FP +EWN +EK+++  H+PFT P    E+    DL 
Sbjct: 418 LRLALGAEMKLIDPDQIDLLWITEFPMFEWNADEKRLEALHHPFTAPYPEDEA----DLK 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NG EI  G +R + +++  + F  +G+S+E  +++FG L  AF  G PP
Sbjct: 474 TARAQAYDLVYNGLEIGGGSLRIYQADLQRRVFDAIGLSEEEAQDKFGFLLNAFNFGAPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDR+ MLL G +++R+   FP +Q    LL  +PS+V  +QL+EL ++    P
Sbjct: 534 HGGIAYGIDRLAMLLSGEESIRDTIAFPKTQQARCLLTQAPSSVDQKQLKELQIKSTAEP 593

Query: 596 K 596
           K
Sbjct: 594 K 594


>gi|325695823|gb|EGD37720.1| aspartate--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 584

 Score =  610 bits (1572), Expect = e-172,   Method: Composition-based stats.
 Identities = 230/597 (38%), Positives = 342/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD
Sbjct: 119 VNDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E       S  F R+ YDDA+  YG DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGIEF-SLPFPRMKYDDAMALYGVDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  + T  +   L +++ D   F+A       +     R  
Sbjct: 353 KVTDGE-----LAGPVAKFLTDL-TSQLTDALQLENNDLVLFVADTLEVANAALGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++  + +
Sbjct: 527 ALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQVEAHEE 583


>gi|165919222|ref|ZP_02219308.1| aspartyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|165917083|gb|EDR35687.1| aspartyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 590

 Score =  610 bits (1572), Expect = e-172,   Method: Composition-based stats.
 Identities = 229/593 (38%), Positives = 339/593 (57%), Gaps = 5/593 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH    +  S +   + L GWVHR R HGG+IF+D+RD  G+ QVV NP +S  F++A+
Sbjct: 2   RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+V+ + G V  R   T+N +I +G++E++A  I +L+ ++ LP  +   +E  E 
Sbjct: 62  SLRNEYVIKVTGKVHKRPEGTVNPHIPSGELEIAASDITLLNKSKPLPFNIDEYQEVSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R+LDLRR  + + +  R+ II  +R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 122 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +K++LM +GFDRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 182 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ DI   ME ++R +F  F N   + + F RI YD+AI+ YGTD+PDLRNP+ + +VT
Sbjct: 241 VEEKDIQQLMETMIRHLFSTFLNV-PLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF +  +   G        KG   +R   D   ++    G  GLAYI    
Sbjct: 300 DLMKSVEFKVFKEPANNPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVEN 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G      P+ K L       I  R   Q GD  FF A             R+ +  +
Sbjct: 360 IDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFFGADKAKIVNESLGALRDRLCAD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     ++  W++DFP ++  E+       H+PFT  Q         +   + +  YD
Sbjct: 420 LNLY-EGQWKPVWVVDFPMFDR-EDVGDWQALHHPFTALQETDPEKVIANPGDVLSRAYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR +   +       +GISKE+ E +FG L  A Q G PP GGIA G+
Sbjct: 478 MVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLGGIAFGL 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+V ++ GA ++R+V  FP +Q     L  +P+ V   QL  LGL++ ++ K
Sbjct: 538 DRLVAIMTGASSIRDVIAFPKTQTAQCPLTSAPTQVETLQLETLGLKVSKHRK 590


>gi|332365464|gb|EGJ43225.1| aspartate--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 584

 Score =  610 bits (1572), Expect = e-172,   Method: Composition-based stats.
 Identities = 229/597 (38%), Positives = 345/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVATEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E +N  + TG +EL  + + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEYVIEVTGKVAAR--EQVNDKLATGSVELHVESLIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD
Sbjct: 119 VNDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E    + V   F R+ YDDA+  YG DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGID-VELPFPRMKYDDAMALYGVDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G +A  GPVAK L  + T  +   L +++ D   F+A       +     R  
Sbjct: 353 KV---ADGELA--GPVAKFLTDL-TSQLTEALQLENNDLVLFVADTLEVANAALGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LGKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSNQEATEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++  + +
Sbjct: 527 ALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQVEAHEE 583


>gi|187778365|ref|ZP_02994838.1| hypothetical protein CLOSPO_01957 [Clostridium sporogenes ATCC
           15579]
 gi|187771990|gb|EDU35792.1| hypothetical protein CLOSPO_01957 [Clostridium sporogenes ATCC
           15579]
          Length = 593

 Score =  610 bits (1572), Expect = e-172,   Method: Composition-based stats.
 Identities = 231/594 (38%), Positives = 343/594 (57%), Gaps = 12/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG+   +++G  V + GWV R R  GG+IF+D+RD  GI Q+V     +   FE 
Sbjct: 9   KRTIMCGEPRENNIGQKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           + +V+SE+ + + G ++ R   + N ++ TG +EL  + I+ILS +E  P+ +    +  
Sbjct: 69  SDNVKSEYCIAVTGEIVKRQ--SPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDAS 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + K  + R +    +R  +    F+E  TPILT S+PEGARD+L
Sbjct: 127 ENIRLKYRYLDLRRPDMQKIFMVRHKTCKVVRNFLDENGFLEMETPILTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR  +G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE+DD++   E +L  VF+E +  +       R+ Y  A+ RYG+DKPDLR  + +++
Sbjct: 246 SFVEEDDVIELNERLLAKVFKEVAGIDI-KLPIERMPYKIAMERYGSDKPDLRFGMEIND 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE   +SEF+VF   +                   R   D++ ++ ++    GLA+I +
Sbjct: 305 LTEVVKNSEFKVFKGAIENGGSVRAIK-AGNCANMGRKQIDKLQDFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE        P+AK L     +AI  ++D + GD    +A             R H+A
Sbjct: 364 KEDE-----IKSPIAKFLTEEEMKAILEKMDAKVGDLILIVADKNNVVFESLGALRLHLA 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL IIN + F F WI +FP   +NEEE +    H+PFT        L   D   ++A  
Sbjct: 419 KELDIINKDEFRFVWITEFPLLSYNEEEGRYQAEHHPFTALMDEDIELLDTDPGKVRAKA 478

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H S++  + F+ +G +KE    RFG L  AF+ G PPHGG+A 
Sbjct: 479 YDIVLNGEELGGGSIRIHDSKLQEKMFNVLGFTKEKAWERFGFLLEAFKFGPPPHGGLAY 538

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR++M L G +N+++V  FP +QN    L  +P+ V   QL ELG++ +E  
Sbjct: 539 GLDRMIMFLAGTENIKDVITFPKNQNAFCPLTEAPNVVDENQLEELGIKKIEKE 592


>gi|332358865|gb|EGJ36687.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 584

 Score =  610 bits (1572), Expect = e-172,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 344/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD
Sbjct: 119 VNDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E      VS  F R+ YDDA+  YG DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGIE-VSLPFPRMKYDDAMALYGVDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTEFVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G +   GPVAK L  + T  +   L +++ D   F+A       +     R  
Sbjct: 353 KV---ADGELT--GPVAKFLTDL-TSQLTEALQLENNDLVLFVADTLEVANAALGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKESEQELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEATEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++  + +
Sbjct: 527 ALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQVEAHEE 583


>gi|148656111|ref|YP_001276316.1| aspartyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|229470565|sp|A5UUR3|SYD_ROSS1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148568221|gb|ABQ90366.1| aspartyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 589

 Score =  610 bits (1572), Expect = e-172,   Method: Composition-based stats.
 Identities = 244/592 (41%), Positives = 338/592 (57%), Gaps = 7/592 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFE 60
            YR+H+CG+L    +G  V L+GWVHR R HG +IF+D+RD YGITQ+V +         
Sbjct: 1   MYRSHTCGELRAEHIGQEVLLAGWVHRRRDHGPLIFIDLRDRYGITQIVFDSADSPVAHA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A   R E+VL + G V+ R  E  N +I TG IE+ A +  +L+ A+  PL +  E   
Sbjct: 61  VASDARVEYVLQVRGRVVQRPEEAYNPDIATGMIEVHATEATVLNPAKTPPLYINKEGGE 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E++R KYR+LDLRR+ + +NI+ R RI+  +R  +  E F+E  TPIL  S+PEGARD+
Sbjct: 121 EETLRLKYRYLDLRRERMQRNIMLRHRIVKFIRDFLDREGFVEIETPILIKSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQ+PQQ KQLLM +GFDRYFQIA CFRDED R+DR P EF QLDME
Sbjct: 181 LVPSRLHPGKFYALPQSPQQLKQLLMVAGFDRYFQIARCFRDEDQRADRQP-EFTQLDME 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q D+L+ +E +   +  E      +   F R+ Y +A+ R+G+DKPDLR  + + 
Sbjct: 240 MSFVDQGDVLDIIERLFTALCREIVPHKRLVTPFPRLTYAEAMERFGSDKPDLRYGLELV 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++    S F VF   L      +   IP   G  +R   D + E A+  G  GL +  
Sbjct: 300 DVSDVVAASSFGVFRAALDTGGQVKGLRIP-GAGSYSRKQIDEVVELAKQAGARGLLWAV 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               E G V       + ++     AI  R++   GD    +A  P          R   
Sbjct: 359 V-PGEGGEV--RSSFGRQVSPDEMAAIIRRMEGAPGDLLLIVADPPKIVAQTLDRLRREF 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
              L + + N   + W++DFP  EWNEEE++ D  H+PFT P+     L   D   ++A 
Sbjct: 416 GARLNLADPNVLAWAWVIDFPLVEWNEEEQRWDAVHHPFTAPKDEDLHLMDTDPGRVRAK 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDL+ NG+E   G IR H  +V  + F  +GI +E    +FG +  AF+ G PPHGGIA
Sbjct: 476 AYDLILNGYEAGGGSIRIHRRDVQQRLFDLLGIDRETAMRQFGHMLEAFEYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            GIDRI M+L     +REV  FP +Q   DL+  +PS V   QLREL + + 
Sbjct: 536 PGIDRICMILADEVTIREVMAFPKTQQAVDLMTNAPSPVDERQLRELHIALR 587


>gi|327463737|gb|EGF10053.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 584

 Score =  610 bits (1572), Expect = e-172,   Method: Composition-based stats.
 Identities = 227/597 (38%), Positives = 342/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD
Sbjct: 119 VNDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR++QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRIHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E    + V   F R+ YDDA+  YG DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGID-VKLPFPRMKYDDAMALYGVDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GP+AK L  + T  +   L +++ D   F+A       +     R  
Sbjct: 353 KVIDGE-----LAGPIAKFLTDL-TSPLTETLQLENNDLVLFVADTLEVANAALGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LGKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++  + +
Sbjct: 527 ALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQVEAHEE 583


>gi|328945231|gb|EGG39385.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 584

 Score =  610 bits (1572), Expect = e-172,   Method: Composition-based stats.
 Identities = 227/597 (38%), Positives = 341/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD
Sbjct: 119 VNDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR++QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRIHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E    + V   F R+ YDDA+  YG DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGID-VKLPFPRMKYDDAMALYGVDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE      F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTELVKGVGFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GP+AK L  + T  +   L +++ D   F+A       +     R  
Sbjct: 353 KVIDGE-----LAGPIAKFLTDL-TSPLTETLQLENNDLVLFVADTLEVANAALGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LGKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++  + +
Sbjct: 527 ALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQVEAHEE 583


>gi|296126518|ref|YP_003633770.1| aspartyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296018334|gb|ADG71571.1| aspartyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 587

 Score =  610 bits (1572), Expect = e-172,   Method: Composition-based stats.
 Identities = 235/593 (39%), Positives = 345/593 (58%), Gaps = 9/593 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           R+++   G L  +D+G  V+L+GWV R R HGG+IF+D+RD  G  Q+V NP+       
Sbjct: 2   RFKSAYNGILSKNDIGKEVKLAGWVLRRRDHGGVIFVDLRDRTGFVQIVFNPEISKEAHN 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ ++G V +RS E IN  I TG+IE+  +K+E+L+ +E  P  +  + + 
Sbjct: 62  DAQDLRSEYVISVEGKVRARSEEMINPKIPTGEIEVMVEKMELLNTSETPPFLLEDDIDT 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LDLRR  +  N+ KR +I N+ R  +    FI+  TPIL  S+PEGARDF
Sbjct: 122 GEDIRLKYRYLDLRRPKVFNNLYKRFQITNAFRKHLADNGFIDVETPILNKSTPEGARDF 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQ+PQ +KQ+LM  GFDRY+Q+A CFRDED R+DR P EF Q+D+E
Sbjct: 182 LVPSRLNAGDFYALPQSPQIFKQILMIGGFDRYYQVAKCFRDEDLRADRQP-EFTQVDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  D+ L+ ME+V   + ++    + +   F R+ Y DA+  YG+DKPD R  + + 
Sbjct: 241 TSFLNTDEFLSIMESVTANIVKDVYGID-LPTPFPRLNYYDAMEMYGSDKPDTRFELKLI 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV E     +F VF   L                  +R   D   ++    G  GLA++ 
Sbjct: 300 NVEEAVRGCDFAVFKNALDNKFIIRCLNAKGGVDKLSRKDIDDFTKYVGIFGAKGLAWM- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E+G  +    + K  +  N + I      + GD  FF+A  P        + R  +
Sbjct: 359 -RVTENGLESN---IVKFFSEDNQKKILEVTKAEKGDLLFFVADTPKVTYDALGNLRLKV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L +I+ +   F W+++FP +E++ +EK+I   H+PFT P      L   D+L +++ 
Sbjct: 415 GEKLNLIDKDKLNFLWVVEFPLFEYDHKEKRISATHHPFTAPVPEDVPLLDTDVLKVRSD 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG EI  GG R + S+V  + FS +GI  E  + RFG L  A + G PP  G+A
Sbjct: 475 TYDLVLNGNEIGGGGQRIYDSKVQAKIFSLLGIDDEKAKIRFGFLLDALKYGAPPMCGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            GIDR++MLL    ++REV  FP +Q    L+ G PSTV  +QL EL L++ E
Sbjct: 535 FGIDRVIMLLQKQDSIREVIAFPKTQKGQCLMSGCPSTVDDDQLEELHLKVEE 587


>gi|73667286|ref|YP_303302.1| aspartyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|97196669|sp|Q3YRF1|SYD_EHRCJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|72394427|gb|AAZ68704.1| aspartyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 590

 Score =  610 bits (1572), Expect = e-172,   Method: Composition-based stats.
 Identities = 296/595 (49%), Positives = 398/595 (66%), Gaps = 7/595 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACF 59
           M+ YRTH C +L    +   V LSGWV+R R HG IIF+D+RDHYGITQ+V N  D+  F
Sbjct: 1   MNIYRTHLCNELREEHINQEVILSGWVYRKRDHGKIIFVDLRDHYGITQLVFNEADNEIF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           ++   ++ E V+ I G V++R + TIN  + TG IE+    + I S A  LP+ +   +E
Sbjct: 61  QLISYLKLESVITIKGTVVARDSSTINTTVSTGLIEVVVNHVTIESEANLLPMNIASTQE 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           YPE IRFKYRFLDLRRD +  NI+ R+++I  +R  M    FIE  TPILT+SSPEGARD
Sbjct: 121 YPEDIRFKYRFLDLRRDKVKHNIILRSKVIAELRKSMENMGFIEIQTPILTSSSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR++ G FYALPQAPQ +KQ+LM SGFD+YFQIAPCFRDED R+DR PGEFYQLDM
Sbjct: 181 YLVPSRIHHGKFYALPQAPQLFKQILMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ N +E VL  +F +FS   T+   F RI Y +A+  YG+DKPDLRNP+I+
Sbjct: 241 EMSFVTQEDVFNVIEPVLLNIFSKFS-SKTIHKEFPRISYHNAMLYYGSDKPDLRNPLII 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTE F  S+F +F+  +             K     R+F D   E+A++ G  GL YI
Sbjct: 300 QDVTEIFRDSQFNIFNSNIK-KGMVVRAIPAPKTANNPRSFFDNKIEFAKTLGAQGLGYI 358

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  D     +  GP+AK L+      I+   ++Q GDS FF++    K   FA + R  
Sbjct: 359 TFNDD----SSAKGPIAKFLDEERLNKIKSICNLQTGDSVFFVSETEDKAAEFAGEIRTI 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  EL +I  + F FCW++DFP+++++++EK I F HNPF+MPQGG+E+L   D LSI A
Sbjct: 415 LGTELNLIEPDTFRFCWVVDFPYFKYDKKEKSIGFFHNPFSMPQGGLEALNNQDPLSILA 474

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG EI+SG IRNH  ++M +AFS  G ++E+V+ +F  L RAF+ G PPHGGI
Sbjct: 475 YQYDIVCNGIEISSGAIRNHKLDIMYKAFSIAGYTQEMVDKKFNSLTRAFKFGAPPHGGI 534

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A GIDR+VMLL  A N+REV  FP++Q+  DLLMG+PS +  E L+ L L I + 
Sbjct: 535 APGIDRMVMLLADATNIREVICFPLNQSGEDLLMGAPSEIDTEHLKLLSLNITKK 589


>gi|313892012|ref|ZP_07825613.1| aspartate--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119655|gb|EFR42846.1| aspartate--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 599

 Score =  609 bits (1571), Expect = e-172,   Method: Composition-based stats.
 Identities = 236/595 (39%), Positives = 350/595 (58%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  C ++ +++ G  V L+GWV   R HGG+IF+D+RD  GI Q+V +P      F  A
Sbjct: 9   RTCECSNVSIAECGKEVTLAGWVQTRRDHGGLIFIDLRDRSGIVQLVFSPQHGEEAFHKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VRSE+VL + G+V  RS +TIN  +  G IE+   ++ +L+ ++  P  V    +  E
Sbjct: 69  EDVRSEYVLAVKGVVRERSEDTINEKMKNGNIEVVVSEMRVLNKSKTPPFYVEDGIDVDE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR K+R++DLRR  +  +++ R +I++++R  M    ++E  TPILT S+PEGARD+LV
Sbjct: 129 NIRLKHRYIDLRRPEMLNHLIMRHKIVHNIREYMNKHGYLEIETPILTKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G F+ALPQ+PQ +KQLLM SG ++YFQIA CFRDED R+DR P EF QLD+E+S
Sbjct: 189 PSRVNPGEFFALPQSPQLFKQLLMVSGVEKYFQIARCFRDEDLRADRQP-EFTQLDIEVS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +Q+ IL+ ME +++ +F+E  N + V   F RI +DDA+  YG+DKPDLR  +  ++V
Sbjct: 248 FEDQEYILSLMERMMQQLFKEILNID-VPVPFKRIKWDDAMNLYGSDKPDLRFDMHFYDV 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+     +F+VF  I+      +   +        R   D + ++    G  G+ ++ ++
Sbjct: 307 TDLLRECDFKVFRSIVDNGGVIKAINVKGY-SDIPRRDLDDLVDYVGRYGAKGMVWMGFQ 365

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D  G +     V K L       I    + ++GD    IA  P        + R  +A+
Sbjct: 366 KD--GKLKCQ--VTKFLGEEKVREIGKFCEAEEGDLLLLIADKPKIVAHALGELRLEMAR 421

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              +IN N F F W+ DFP +E+NE+EK+    H+PFT P+         D   + A  Y
Sbjct: 422 RRNLINENEFCFRWVTDFPMFEYNEDEKRYVAEHHPFTAPRDEDIQYLKTDPSKVYAKAY 481

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG EI  G +R +  E+  Q F  +G+S E  E RFG L  AFQ G PP  GIA G
Sbjct: 482 DMVLNGTEIGGGSLRIYQPELQKQVFEAIGLSDEEAEERFGFLLEAFQYGAPPELGIAFG 541

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VML+L  K++R+V  FP +Q+  D L  +PS VS +QLREL ++     +K
Sbjct: 542 LDRLVMLMLKCKSIRDVIAFPKTQSAIDPLTQAPSGVSDKQLRELHIKTSIKTEK 596


>gi|327458419|gb|EGF04775.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327471754|gb|EGF17195.1| aspartate--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 584

 Score =  609 bits (1571), Expect = e-172,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 344/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVESLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD
Sbjct: 119 VNDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E    + VS  F R+ YDDA+  YG DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGID-VSLPFPRMKYDDAMALYGVDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTELVKGVDFKVFSEA----PVVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  + T  +   L +++ D   F+A       +     R  
Sbjct: 353 KVAEGE-----LAGPVAKFLTDL-TSQLTEALQLENNDLVLFVADTLEVANAALGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++  + +
Sbjct: 527 ALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSLVSVAQLEELSLQVEAHEE 583


>gi|271967379|ref|YP_003341575.1| aspartyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
 gi|270510554|gb|ACZ88832.1| aspartyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
          Length = 578

 Score =  609 bits (1571), Expect = e-172,   Method: Composition-based stats.
 Identities = 232/592 (39%), Positives = 331/592 (55%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG++F+D+RD  G +QVV   +    + A  
Sbjct: 3   RTHEAGSLRKEHAGQQVTLAGWVARRRDHGGVVFIDLRDASGSSQVVFREE----DDAHG 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  + TG IE+ A ++E+LS +  LP P+ G     E  
Sbjct: 59  LRAEYCVKVVGEVRVRPEGNENPELPTGAIEVVASEVEVLSESAPLPFPIEGNAGVSEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LD+RR  +   +  R++        M    F    TP LT S+PEGARDFLVP 
Sbjct: 119 RLKYRYLDIRRQQVANAMRIRSKATYLAHEVMNEHGFNYIETPTLTRSTPEGARDFLVPV 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM +G +RY+Q+A CFRDED R+DR P EF Q+D+EMSFV
Sbjct: 179 RLQPGSWYALPQSPQLFKQLLMVAGMERYYQLARCFRDEDLRADRQP-EFTQIDVEMSFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E ++  +++E      +     R+ Y DA+ RYG+DKPDLR    +  +TE
Sbjct: 238 DQDDVIALGEALVGRIWKETIGYE-LPTPLPRMTYWDAMSRYGSDKPDLRFGQELVEMTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G   +R   D   +WA+S+G  GLAY+   + 
Sbjct: 297 YFADTTFRVFQAP------YVGAVVMPGGASQSRKELDGWQDWAKSRGARGLAYVL--VG 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L+      +  +   + GD+ FF AG           AR  I +  
Sbjct: 349 EDGALG--GPVAKNLSETEAAGLAAKTGAKPGDAIFFAAGTAAASRDLLGAARLEIGRRC 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G+I+ + + F WI+D P +E +  E      H+PFT P+        +      A+ YD+
Sbjct: 407 GLIDESAWNFLWIVDAPMFEED-GEGGWTAVHHPFTGPKPEWADNFQDHPGEALAYAYDM 465

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           VCNG EI  G IR H +E+  + F  +GISKE  EN+FG L  AF+ G PPHGGIA G D
Sbjct: 466 VCNGMEIGGGSIRIHRAEMQQRVFDVLGISKEEAENKFGFLLEAFKYGPPPHGGIAYGWD 525

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           RI MLL G  ++R+V  FP + +  D L G+P+ ++ EQ +E G+      +
Sbjct: 526 RICMLLAGGDSIRDVIAFPKTASGFDPLTGAPTPITGEQRKEAGVDAKPKAE 577


>gi|269468785|gb|EEZ80389.1| aspartyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 584

 Score =  609 bits (1571), Expect = e-172,   Method: Composition-based stats.
 Identities = 226/593 (38%), Positives = 340/593 (57%), Gaps = 12/593 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG+L   ++   V L GWV+R R HGG+IFLD+RD  GI QVV NP+    FEIA+
Sbjct: 2   RTDYCGELNKDNIDQTVELCGWVNRRRDHGGVIFLDMRDKRGIAQVVINPEHKKTFEIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+VL I G V++R    IN  + TG+IE+ A +IEIL+ ++ +P       +  E 
Sbjct: 62  GVRSEFVLKITGKVIARGEGLINPKLATGEIEVVADEIEILNTSKPIPFQ-IDSTDTSEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRRD + + +  R+++ + MR  M   +F++  TP LT ++PEGARD+LVP
Sbjct: 121 VRLKYRYLDLRRDEMQQRLRLRSKVTHFMREFMDNNDFLDIETPFLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +KQLLM SGF+RY+QI  CFRDED R+DR P EF QLD+E SF
Sbjct: 181 SRTHPGEFFALPQSPQLFKQLLMMSGFERYYQIVKCFRDEDLRADRQP-EFTQLDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +++D+I+  ME + RG+F+   + +  +  F  I Y DA+  YG D+PD+R  + + ++ 
Sbjct: 240 MDEDEIMAMMEEMTRGMFKSVIDVDLPAE-FPTITYADAMSLYGVDRPDMRISMQITDMD 298

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E     +F+VFS   +             G   +R   D+  ++    G  GLAYI    
Sbjct: 299 ELMQGVDFKVFSGPANDVESRVAALRVPGGATISRKNIDKYTKYVSIYGAKGLAYIKLNE 358

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           D         P+ K L    T  +      Q GD  FF A           + R  +A++
Sbjct: 359 D-----GPASPILKFLGDDVTAKVIEMTGAQTGDIIFFGADKTKIVNEALGNLREQLAKD 413

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + +   +   W++DFP ++ + +   ++  H+PFT P    ++L+     +  +  YD
Sbjct: 414 LDLFDK-QWAPIWVVDFPMFDVDGD-GSLNAIHHPFTAPSVDAKTLEST-ADTALSRAYD 470

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG E+  G IR H  E+       +GIS +  +++FG L  A + G PPHGG+A G+
Sbjct: 471 LVINGSEVGGGSIRIHQVEMQQTVLKLLGISDDEAKDKFGFLLDALEYGCPPHGGMAFGL 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VM++ G  ++REV  FP +Q    LL  +P++V  + LREL +++    K
Sbjct: 531 DRLVMIMTGTDSIREVIAFPKTQTAACLLTNAPASVPRKVLRELSVKVSLPEK 583


>gi|157964212|ref|YP_001499036.1| aspartyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157843988|gb|ABV84489.1| Aspartyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 607

 Score =  609 bits (1571), Expect = e-172,   Method: Composition-based stats.
 Identities = 302/605 (49%), Positives = 412/605 (68%), Gaps = 10/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           MH+YRTH+C +L +SDV   V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 6   MHKYRTHNCNELQISDVEKEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 65

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  + S A+ LP  +  E++
Sbjct: 66  EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 125

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 126 APEESRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEGARD 185

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 186 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 245

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++       F+ I Y++++ +YG+DKPDLRNPII+
Sbjct: 246 EMSFVTQEDVFSTLEPVMYDLFTKFTDKKVSETPFICIPYNESMLKYGSDKPDLRNPIII 305

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTE F  S+F +F + +           P K     R+F D+M E+A S+G  GL YI
Sbjct: 306 ADVTEIFRDSDFTIFRENIKKGSIVRAIPAP-KAAALPRSFFDKMIEFAISEGAGGLGYI 364

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +    S      GPV K L+    E+++    + +GD+ FF +    K    A   R  
Sbjct: 365 QF----SETGEAKGPVVKFLSPQQLESLKATASISNGDAVFFASDKKEKAAKLAGKVRIR 420

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDLL 475
           + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +LL
Sbjct: 421 LGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEELL 480

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G PP
Sbjct: 481 ELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAPP 540

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  + 
Sbjct: 541 HGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPSA 600

Query: 596 KKILK 600
           +K  +
Sbjct: 601 RKNAE 605


>gi|33151787|ref|NP_873140.1| aspartyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|38372511|sp|Q7VNF0|SYD_HAEDU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33148008|gb|AAP95529.1| aspartyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 589

 Score =  609 bits (1571), Expect = e-172,   Method: Composition-based stats.
 Identities = 214/589 (36%), Positives = 329/589 (55%), Gaps = 7/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           R+H CG L  S VG  V LSGWVHR+R  G  IF+ IRD  GI QV  +  D   F++A 
Sbjct: 3   RSHYCGTLNRSHVGQAVTLSGWVHRIRNLGRFIFMQIRDREGIVQVFFDEKDDTLFKVAS 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E  + I G V++R    IN  + TG+IE+  Q + + + AE   LP+   +   E 
Sbjct: 63  QLRAEACVQIQGQVIARDEAQINPEMATGEIEVLVQNVLVYNNAE--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +N+  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRHKMAENLKTRAKITSFVRRYMDEHGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  +++   MEN++  ++ +  N +     F  + + +A++ +G+DKPDLRNP+ + ++ 
Sbjct: 240 LTAEEVRALMENMIHSLWLDRLNVD--LGKFPIMSWQEAMQHFGSDKPDLRNPLELVDIA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   + EF VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKNVEFNVFNEPANAIDGRVTVLRVPNGATLTRKQIDEYTQFVAIYGAKGLAWAKIND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK LN     A+  R   Q+GD  FF A             R  I ++
Sbjct: 358 INAGMDGIQSPVAKFLNAEIFNALIERTAAQNGDILFFGADKWQVVTDAMGALRLKIGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + +   ++  W++DFP +E +  E  +   H+PFT P+         D +   A  YD
Sbjct: 418 LALTDQTAWKPLWVIDFPMFERD-GEGNLSAMHHPFTAPKDLSPDQLAADPIKAVANAYD 476

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R    ++    F+ +GI+++  + +FG L  A + G PPH G+A G+
Sbjct: 477 MVINGYEVGGGSVRIFDPKMQQTVFNILGINEQDQQEKFGFLLDALKFGTPPHAGLAFGL 536

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           DR+ ML+ G +N+R+V  FP +     L+  +PS  + + L+EL ++  
Sbjct: 537 DRLTMLITGTENIRDVIAFPKTTAAACLMTEAPSYANPQVLQELAIQTT 585


>gi|254524468|ref|ZP_05136523.1| aspartyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219722059|gb|EED40584.1| aspartyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 583

 Score =  609 bits (1571), Expect = e-172,   Method: Composition-based stats.
 Identities = 221/591 (37%), Positives = 332/591 (56%), Gaps = 12/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV    D+   F +A 
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNQGGVCFIDLRDHEGIVQVTVEVDNAEVFAVAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+  E VL ++G+V +R A  +N  + TG++E+ A  I +L+ A    LP        E 
Sbjct: 62  SLGYEDVLQVEGVVRARHA--VNDKMRTGKVEVIATAITVLNKAAP--LPFHAHENPGEE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +    R +++ ++R  +  + F +  TPILT ++PEGARDFLVP
Sbjct: 118 TRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDEKGFQDIETPILTKATPEGARDFLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLDME +F
Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V + D+ + +EN++R +F+E  +   +  +F R+ + +A+RRYG+DKPDLR  + + +V 
Sbjct: 237 VRERDVQDFVENMIRAIFKEVVDVE-LDASFPRMTWAEAMRRYGSDKPDLRIALELVDVA 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E    SEF VF+   +   G         G   +R   D     A   G  GLAYI  ++
Sbjct: 296 ELVKDSEFPVFTGPANDAEGRVAALRIPGGAALSRKQIDEYAAHAAKYGAKGLAYI--KI 353

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G V+   P+ K  +  +  A+   +   +GD  FF AG   K   F    R    ++
Sbjct: 354 ADNGEVS--SPIQKFFSEASFAALVAHVGAGNGDIVFFGAGGYNKVSDFMGALRLKAGKD 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G++  + +   W+ DFP +EW+EEE++    H+PFT P     +    +  +  +  YD
Sbjct: 412 FGLV-ADGWAPLWVTDFPMFEWDEEEQRYVALHHPFTAPAVDDIADLRANARTAVSRGYD 470

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGGIA GI
Sbjct: 471 MVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIAFGI 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DRI  L+ G +++R+V  FP +    DL+  +PS +   QL E+ +++   
Sbjct: 531 DRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIVDTQLAEVHIQVRPK 581


>gi|327467319|gb|EGF12819.1| aspartate--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 584

 Score =  609 bits (1571), Expect = e-172,   Method: Composition-based stats.
 Identities = 229/597 (38%), Positives = 343/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVRKGHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+VL + G V +R  E +N  + TG +EL  + + +L+ A+  P  +    E
Sbjct: 61  STAESLRSEYVLEVTGKVAAR--EQVNDKLATGSVELHVESLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD
Sbjct: 119 VNDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR++QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRIHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E      VS  F R+ YDDA+  YG DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGIE-VSLPFPRMKYDDAMALYGVDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T+     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTDLVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L    T  +   L +++ D   F+A       +     R  
Sbjct: 353 KVADSE-----LAGPVAKFLT-NLTSPLTEALQLENNDLILFVADTLEVANAALGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++  + +
Sbjct: 527 ALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQVEAHEE 583


>gi|251780139|ref|ZP_04823059.1| aspartate--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084454|gb|EES50344.1| aspartate--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 599

 Score =  609 bits (1571), Expect = e-172,   Method: Composition-based stats.
 Identities = 228/597 (38%), Positives = 341/597 (57%), Gaps = 13/597 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG+     VG  + L GWV R R  GG+ F+D+RD  GI QVV     ++  FE 
Sbjct: 9   KRTMMCGEPREEHVGQKITLMGWVQRNRKLGGLDFIDLRDKTGIMQVVFGEEINAEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK VR E+ + + G V+ R  E++N N+ TG +EL  + ++ILS +E  P+ +    +  
Sbjct: 69  AKGVRPEYCIAVTGEVVKR--ESVNENMPTGFVELKCESLKILSESETPPIYIKENLDAA 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  +H+    R++   S+R  +   +F++  TP+LT S+PEGARD+L
Sbjct: 127 ENIRLKYRYLDLRRPDMHRIFEIRSKTTKSIRDYLEKNDFLDVETPMLTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYPGMFYALPQSPQIFKQLLMVSGFDKYYQIVKCFRDEDLRANRQP-EFTQVDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQDDI+   E ++  VF+E +  + V     R+ + DA+ +YG+DKPDLR  + + N
Sbjct: 246 SFVEQDDIMALNEGLIAHVFKEVAGVD-VKLPIKRMTFKDAMEKYGSDKPDLRFGMEITN 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F VF   +          +   G    R   D++ E+ ++    GLA+I  
Sbjct: 305 ITEDVKDMDFVVFKSAIEAGGSVRALCLK-GGAELGRKPLDKLGEFVKTYKAKGLAWIQL 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D          +AK L    T +I   +  + GD+   +A             R  +A
Sbjct: 364 KED-----GVKSSIAKFLTDDVTNSIIETMGAETGDAILIVADKESVVFQSLGALRLELA 418

Query: 422 QELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           ++  +I + N F F WI +FP +E++EEE++    H+PFT P         +    +++ 
Sbjct: 419 KQFELIKDKNEFNFTWITEFPLFEYSEEEERYTACHHPFTAPMEEDLDFLESAPGKVRSK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H  E+  + F  +G ++E    RFG L +AF+ G PPHGG+A
Sbjct: 479 AYDLVLNGEELGGGSIRIHDMELQQRMFKALGFTEEQAWERFGFLLQAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR++M L G +N+++V  FP +QN    L  +P+    +QL ELG+ I+   +K
Sbjct: 539 FGLDRMIMFLAGTENIKDVIAFPKNQNAYCYLSEAPNIADEKQLTELGIGILPKQEK 595


>gi|187933861|ref|YP_001885235.1| aspartyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|238691638|sp|B2TN05|SYD_CLOBB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|187722014|gb|ACD23235.1| aspartate--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 599

 Score =  609 bits (1570), Expect = e-172,   Method: Composition-based stats.
 Identities = 230/597 (38%), Positives = 343/597 (57%), Gaps = 13/597 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG+     VG  + L GWV R R  GG+ F+D+RD  GI QVV     +S  FE 
Sbjct: 9   KRTMMCGEPREEHVGQKITLMGWVQRNRKLGGLDFIDLRDKTGIMQVVFGEEINSEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AKSVR E+ + + G V+ R  E++N N+ TG +EL  + ++ILS +E  P+ +    +  
Sbjct: 69  AKSVRPEYCIAVTGEVVKR--ESVNENMPTGFVELKCESLKILSESETPPIYIKENLDAA 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  +H+    R++   S+R  +   +F++  TP+LT S+PEGARD+L
Sbjct: 127 ENIRLKYRYLDLRRPDMHRIFEIRSKTTKSIRDYLEKNDFLDVETPMLTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR  +G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYRGMFYALPQSPQIFKQLLMVSGFDKYYQIVKCFRDEDLRANRQP-EFTQVDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQDDI+   E ++  VF+E +  + V     R+ + DA+ +YG+DKPDLR  + + N
Sbjct: 246 SFVEQDDIMALNEGLIAHVFKEVAGVD-VKLPIKRMTFKDAMEKYGSDKPDLRFGMEITN 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F VF   +          +   G    R   D++ E+ ++    GLA+I  
Sbjct: 305 ITEDVKDMDFVVFKSAIEAGGSVRALCLK-GGATLGRKPLDKLGEFVKTYKAKGLAWIQL 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D          +AK L    T +I   +  + GD+   +A             R  +A
Sbjct: 364 KED-----GVKSSIAKFLTDDVTNSIIETMGAETGDAILIVADKESVVFQSLGALRLELA 418

Query: 422 QELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           ++  +I + N F F WI +FP +E++EEE++    H+PFT P         +    +++ 
Sbjct: 419 KQFELIKDKNEFNFTWITEFPLFEYSEEEERYTACHHPFTAPMEEDLEFLESAPGKVRSK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H  E+  + F  +G ++E    RFG L +AF+ G PPHGG+A
Sbjct: 479 AYDLVLNGEELGGGSIRIHDMELQQRMFKALGFTEEQAWERFGFLLQAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR++M L G +N+++V  FP +QN    L  +P+    +QL ELG+ I+   +K
Sbjct: 539 FGLDRMIMFLAGTENIKDVIAFPKNQNAYCYLSEAPNIADEKQLTELGIGILPKQEK 595


>gi|165932758|ref|YP_001649547.1| aspartyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|165907845|gb|ABY72141.1| aspartyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 615

 Score =  609 bits (1570), Expect = e-172,   Method: Composition-based stats.
 Identities = 302/605 (49%), Positives = 412/605 (68%), Gaps = 10/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 14  MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 73

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  + S A+ LP  +  E++
Sbjct: 74  EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 133

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 134 APEESRLKHRFLDLRREKLHNNIILRSQIISHLRHLMTARGFTEFQTPILTASSPEGARD 193

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 194 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 253

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++       F+ I Y++++ +YG+DKPDLRNPII+
Sbjct: 254 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 313

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTE F  S F +F + +           P K     R+F D+M E+A S+G  GL YI
Sbjct: 314 ADVTEIFRDSNFTIFRENIKKGSIVRAIPAP-KAAALPRSFFDKMIEFAISEGAGGLGYI 372

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +    S      GPV K L+    E+++    + +GD+ FF +    K    A   R  
Sbjct: 373 QF----SETGEAKGPVVKFLSPQQLESLKATASVSNGDAVFFASDKKEKAAKLAGKVRMR 428

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDLL 475
           + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +LL
Sbjct: 429 LGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEELL 488

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G PP
Sbjct: 489 ELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAPP 548

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL + +  + 
Sbjct: 549 HGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIMLSPSA 608

Query: 596 KKILK 600
           +K  +
Sbjct: 609 RKNAE 613


>gi|319947812|ref|ZP_08022006.1| aspartyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319438536|gb|EFV93462.1| aspartyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 600

 Score =  609 bits (1570), Expect = e-172,   Method: Composition-based stats.
 Identities = 233/599 (38%), Positives = 334/599 (55%), Gaps = 26/599 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTHS G L  +D G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +    E A  
Sbjct: 3   RTHSAGQLRAADAGDTVTLAGWVARRRDHGGVIFVDLRDASGVCQVVFRSEDVA-ERAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R   + N N+ +G+IE+     E+L  A    LP   + E  E  
Sbjct: 62  LRNEYCVAVTGVVDRRPEGSENPNLASGEIEIDVTSFEVLGEA--AALPFQLDDEVGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR+     +  R+++  + R  +   +F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLRHRYLDLRREGPGAALRLRSKVNAAARGVLARHDFVEIETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G+FYALPQ+PQ +KQLLM +G ++Y+Q+A C+RDED R+DR P EF QLD+EMSFV
Sbjct: 180 RLQPGTFYALPQSPQLFKQLLMVAGMEKYYQLARCYRDEDFRADRQP-EFTQLDVEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E +L  V+   + G  ++    R+ YD+A+RRYG+DKPDLR  I +   TE
Sbjct: 239 DQDDVIAVAEEILTEVWA--TAGYEITTPIPRMTYDEAMRRYGSDKPDLRFDIELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAYI   + 
Sbjct: 297 FFADTPFRVFKAP------YVGAVVMKGGASQPRRQLDAWQEWAKQRGAKGLAYIL--VG 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G +   GPVAK+L+      I   +  + GD  FF AG      +    AR  IA +L
Sbjct: 349 DDGELG--GPVAKNLSDSERAGIAAHVGAEPGDCIFFGAGAVKSTRALLGAARGEIAAKL 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
           G+I+   + F W++D P +E  ++                 H+ FT P+         D 
Sbjct: 407 GLIDPTKWAFTWVVDAPMFEPADDATAAGDVAVGSGAWTAVHHAFTSPKPEHLDTFDTDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD+VCNG EI  G IR H  ++  + F  +GIS E  + +FG L  AF  G P
Sbjct: 467 GSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFGVMGISAEEAQEKFGFLLDAFSYGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PHGGIA G DRI  LL G +++R+V  FP S    D L  +P+ ++ +Q +E G+    
Sbjct: 527 PHGGIAFGWDRICALLAGTESIRDVIAFPKSGGGVDPLTDAPAPITAQQRKESGIDAKP 585


>gi|71065761|ref|YP_264488.1| aspartyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|97196821|sp|Q4FSF4|SYD_PSYA2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71038746|gb|AAZ19054.1| aspartyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 608

 Score =  609 bits (1570), Expect = e-172,   Method: Composition-based stats.
 Identities = 226/599 (37%), Positives = 339/599 (56%), Gaps = 14/599 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIA 62
           YR   CG +  S +   + + GWVHR R HGG+IFLD+RD  GI QVV +PD+   F  A
Sbjct: 6   YRDEYCGAVTESLIEQTISVVGWVHRRRDHGGVIFLDMRDRAGILQVVVDPDTPEAFATA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
            +VR E+VL I G V  R   T NAN+ +G IEL A++IE+L+ +E  P P+  E+    
Sbjct: 66  DAVRPEYVLKITGRVRRRYEGTENANMTSGHIELLAKEIEVLAKSETPPFPLNDEKSTVS 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LD+RR  +   +V R +  +++R  +    F++  TPILT ++PEGARD+L
Sbjct: 126 EDLRLKYRYLDMRRPQMQDRMVFRAKATSAIRRYLDDHGFLDVETPILTRATPEGARDYL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E 
Sbjct: 186 VPSRTRPGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIET 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ +++I+N  E +++ VF+   +       F R+ Y +A+R Y +DKPDLR P+ + +
Sbjct: 245 SFLNEEEIMNINEGLIKHVFKTMMDVEFEK--FPRMTYAEAMRDYASDKPDLRIPLKLID 302

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V +     +F+VF+   +   G         G   +R   D   ++    G  GLAYI  
Sbjct: 303 VADLMKDVDFKVFAGPANDPKGRVAALRIPGGASLSRKQIDAYTKFVGIYGARGLAYIKV 362

Query: 362 RLDE------SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
                             P+ K++      ++  R   +  D  FF A            
Sbjct: 363 NDASNINNGVDKESGLQSPIIKNMTDDVLVSLIERTGAESNDIIFFGADKASVVNDAIGA 422

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  I  +L +  C  +   W+ DFP +E  E+  +    H+PFT P+G +E LK  +  
Sbjct: 423 LRQKIGLDLEMTTCE-WAPLWVTDFPMFEETED-GRWTSMHHPFTKPKGSVEELK-TNPE 479

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           S  +  YD+V NG E+  G +R +  E+    F  +GI  +  E++FG L  A + G PP
Sbjct: 480 SALSIAYDMVLNGTEVGGGSLRINTLEMQTAVFEALGIDDQEAEDKFGFLLDALKFGAPP 539

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           HGG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V+ +QLRELG+R+ E 
Sbjct: 540 HGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTAECPLTQAPAEVNTKQLRELGIRVREK 598


>gi|153208291|ref|ZP_01946670.1| aspartyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|120576075|gb|EAX32699.1| aspartyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
          Length = 590

 Score =  609 bits (1570), Expect = e-172,   Method: Composition-based stats.
 Identities = 229/593 (38%), Positives = 339/593 (57%), Gaps = 5/593 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RTH    +  S +   + L GWVHR R HGG+IF+D+RD  G+ QVV NP +S  F++A+
Sbjct: 2   RTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+R+E+V+ + G V  R   T+N +I +G++E++A  I +L+ ++ LP  +   +E  E 
Sbjct: 62  SLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K+R+LDLRR  + + +  R+ II  +R  +    F++  TP+LT S+PEGARD+LVP
Sbjct: 122 VRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G F+ALPQ+PQ +K++LM +GFDRY+QI  CFRDED R+DR P EF QLD+EMSF
Sbjct: 182 SRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQP-EFTQLDLEMSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           VE+ DI   ME ++R +F  F N   + + F RI YD+AI+ YGTD+PDLRNP+ + +VT
Sbjct: 241 VEEKDIQQLMETMIRHLFSTFLNV-PLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF +  +   G        KG   +R   D   ++    G  GLAYI    
Sbjct: 300 DLMKSVEFKVFKEPANNPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVEN 359

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G      P+ K L       I  R   Q GD  FF A             R+ +  +
Sbjct: 360 IDNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFFGADKAKIVNESLGALRDRLCAD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +     ++  W++DFP ++  E+       H+PFT  Q         +   + +  YD
Sbjct: 420 LNLY-EGQWKPVWVVDFPMFDR-EDVGDWQALHHPFTALQETDPEKVIANPGDVLSRAYD 477

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR +   +       +GISKE+ E +FG L  A Q G PP GGIA G+
Sbjct: 478 MVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLGGIAFGL 537

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+V ++ GA ++R+V  FP +Q     L  +P+ V   QL  LGL++ ++ K
Sbjct: 538 DRLVAIMTGASSIRDVISFPKTQTAQCPLTNAPTQVETLQLETLGLKVSKHRK 590


>gi|329121016|ref|ZP_08249647.1| aspartate--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327471178|gb|EGF16632.1| aspartate--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 599

 Score =  609 bits (1570), Expect = e-172,   Method: Composition-based stats.
 Identities = 236/595 (39%), Positives = 349/595 (58%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  C ++ +++ G  V L+GWV   R HGG+IF+D+RD  GI Q+V +P      F  A
Sbjct: 9   RTCECSNVSIAECGKEVTLAGWVQTRRDHGGLIFIDLRDRSGIVQLVFSPQHGEEAFHKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VRSE+VL + G+V  RS +TIN  +  G IE+   ++ +L+ ++  P  V    +  E
Sbjct: 69  EDVRSEYVLAVKGVVRERSEDTINEKMKNGNIEVVVSEMRVLNKSKTPPFYVEDGIDVDE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +IR K+R++DLRR  +  +++ R +I++++R  M    ++E  TPILT S+PEGARD+LV
Sbjct: 129 NIRLKHRYIDLRRPEMLNHLIMRHKIVHNIREYMNKHGYLEIETPILTKSTPEGARDYLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G F+ALPQ+PQ +KQLLM SG ++YFQIA CFRDED R+DR P EF QLD+E S
Sbjct: 189 PSRVNPGEFFALPQSPQLFKQLLMVSGVEKYFQIARCFRDEDLRADRQP-EFTQLDIEAS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +Q+ IL+ ME +++ +F+E  N + V   F RI +DDA+  YG+DKPDLR  +  ++V
Sbjct: 248 FEDQEYILSLMERMMQQLFKEILNID-VPVPFKRIKWDDAMNLYGSDKPDLRFDMHFYDV 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+     +F+VF  I+      +   +        R   D + ++    G  G+ ++ ++
Sbjct: 307 TDLLRECDFKVFRSIVDNGGVIKAINVKGY-SDIPRRDLDDLVDYVGRYGAKGMVWMGFQ 365

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D  G +     V K L       I    + ++GD    IA  P        + R  +A+
Sbjct: 366 KD--GKLKCQ--VTKFLGEEKVREIGRFCEAEEGDLLLLIADKPKIVAHALGELRLEMAR 421

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              +IN N F F W+ DFP +E+NE+EK+    H+PFT P+         D   + A  Y
Sbjct: 422 RRNLINENEFCFRWVTDFPMFEYNEDEKRYVAEHHPFTAPRDEDIQYLKTDPSKVYAKAY 481

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG EI  G +R +  E+  Q F  +G+S E  E RFG L  AFQ G PP  GIA G
Sbjct: 482 DMVLNGTEIGGGSLRIYQPELQKQVFEAIGLSDEEAEERFGFLLEAFQYGAPPELGIAFG 541

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VML+L  K++R+V  FP +Q+  D L  +PS VS +QLREL ++     +K
Sbjct: 542 LDRLVMLMLKCKSIRDVIAFPKTQSAIDPLTQAPSGVSDKQLRELHIKTSIKTEK 596


>gi|190575574|ref|YP_001973419.1| aspartyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|229559939|sp|B2FRP1|SYD_STRMK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|190013496|emb|CAQ47131.1| putative aspartyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 583

 Score =  608 bits (1569), Expect = e-172,   Method: Composition-based stats.
 Identities = 219/591 (37%), Positives = 332/591 (56%), Gaps = 12/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV    D+   F +A 
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNQGGVCFIDLRDHEGIVQVTVEVDNAEVFAVAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+  E VL ++G+V +R A  +N  + TG++E+ A  I +L+ A    LP        E 
Sbjct: 62  SLGYEDVLQVEGVVRARHA--VNDKMRTGKVEVIATAITVLNKAAP--LPFHAHENPGEE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +    R +++ ++R  +  + F +  TPILT ++PEGARDFLVP
Sbjct: 118 TRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDEKGFQDIETPILTKATPEGARDFLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLDME +F
Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V + D+ + +E+++R +F+E  +   +  +F R+ + +A+RRYG+DKPDLR  + + +V 
Sbjct: 237 VRERDVQDFVEDMIRAIFKEVVDVQ-LDASFPRMTWAEAMRRYGSDKPDLRIALELVDVA 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E    SEF VF+   +   G         G   +R   D     A   G  GLAYI  ++
Sbjct: 296 ELVKDSEFPVFTGPANDAEGRVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLAYI--KI 353

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G ++   P+ K  +  +  A+   +   +GD  FF AG   K   F    R    ++
Sbjct: 354 ADNGEIS--SPIQKFFSEASFAALVAHVGAGNGDIVFFGAGGYNKVSDFMGALRLKAGKD 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G++  + +   W+ DFP +EW+EEE++    H+PFT P     +    +  +  +  YD
Sbjct: 412 FGLV-ADGWAPLWVTDFPMFEWDEEEQRYVALHHPFTAPAVDDIADLRANARTAVSRGYD 470

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGGIA GI
Sbjct: 471 MVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIAFGI 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DRI  L+ G +++R+V  FP +    DL+  +PS +   QL E+ +++   
Sbjct: 531 DRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIVDAQLAEVHIQVRPK 581


>gi|239624495|ref|ZP_04667526.1| aspartyl-tRNA synthetase [Clostridiales bacterium 1_7_47_FAA]
 gi|239520881|gb|EEQ60747.1| aspartyl-tRNA synthetase [Clostridiales bacterium 1_7_47FAA]
          Length = 602

 Score =  608 bits (1569), Expect = e-172,   Method: Composition-based stats.
 Identities = 230/598 (38%), Positives = 346/598 (57%), Gaps = 11/598 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-- 58
           M   RTH C ++  +D+G  V + GW+ + R  GGIIF+D+RD  GI Q++         
Sbjct: 6   MGLKRTHRCTEVTTADIGQEVTVMGWIQKSRNKGGIIFVDLRDRSGILQIIFEESDCGAE 65

Query: 59  -FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F  A+ +RSE+V+ + G V +RS   +N N+ TG IE+ A  + +L+ +E  P P+   
Sbjct: 66  NFAKAEKLRSEFVVAVTGRVEARSG-AVNENLATGAIEVRAHSMRVLAESETPPFPIEEN 124

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +  E +R KYRFLDLRR  L +N++ R+R+    R  +  E F+E  TP L  S+PEGA
Sbjct: 125 SKTKEELRLKYRFLDLRRPDLQRNLITRSRVATLTRAFLAEEGFLEIETPTLIKSTPEGA 184

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQ+A C+RDED R+DR P EF Q+
Sbjct: 185 RDYLVPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQLARCYRDEDLRADRQP-EFTQI 243

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DME+SFV+ DD+L+  E +L+ +F+E  N + V     R+ + +A+ RYG+DKPDLR  +
Sbjct: 244 DMELSFVDVDDVLDVNERLLQKLFKEICNFD-VQLPIQRMTWREAMDRYGSDKPDLRFGM 302

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + NV++     EF VF   L             +G    R   D + E+A+  G  GLA
Sbjct: 303 ELKNVSQVVKDCEFVVFKGALENGGSVRGINAEGQG-HMPRKKIDALVEYAKGFGARGLA 361

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+    D     +     AK +     +A+   +D + GD   F A           + R
Sbjct: 362 YVAIAEDG----SFKSSFAKFMKDEEMKALIAAMDGKPGDLLLFAADRDKVVFDVLGNLR 417

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A++LG++  + F+F W+ +FP  E++EEE +    H+PFTMP          D   +
Sbjct: 418 LELARQLGLLKKDDFKFLWVTEFPLLEYSEEEDRYVAMHHPFTMPMDEDIQYIDTDPGRV 477

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G +R H +++  + F  +G + E    +FG L  AF+ G+PPH 
Sbjct: 478 RAKAYDIVLNGVEMGGGSVRIHQADIQSKMFEVLGFTPERANEQFGFLLSAFKYGVPPHA 537

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR+VML++GA ++R+V  FP  ++   L+  +P  V  +QL+ELG+ I    
Sbjct: 538 GLAYGLDRVVMLMVGADSIRDVIAFPKVKDASCLMTEAPGEVDEKQLQELGIEIAAEE 595


>gi|323350720|ref|ZP_08086381.1| aspartate--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322123140|gb|EFX94831.1| aspartate--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 584

 Score =  608 bits (1569), Expect = e-172,   Method: Composition-based stats.
 Identities = 230/597 (38%), Positives = 344/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVRKDHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+VL + G V +R  E +N  + TG +EL  + + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEYVLEVTGKVAAR--EQVNDKLATGSVELHVENLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD
Sbjct: 119 VNDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      VS  F R+ YDDA+  YG DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDITEGLIARVMKETKGIE-VSLPFPRMKYDDAMALYGVDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T+     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTDLVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L    T  +   L +++ D   F+A       +     R  
Sbjct: 353 KVADSE-----LAGPVAKFLT-NLTSPLIEALQLENNDLVLFVADTLEVANAALGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++  + +
Sbjct: 527 ALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQVEAHEE 583


>gi|150016423|ref|YP_001308677.1| aspartyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|189082090|sp|A6LTP1|SYD_CLOB8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|149902888|gb|ABR33721.1| aspartyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 599

 Score =  608 bits (1569), Expect = e-172,   Method: Composition-based stats.
 Identities = 235/600 (39%), Positives = 350/600 (58%), Gaps = 13/600 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG+     VG  + L GWV R R  G + F+D+RD  GI QVV     ++  FE 
Sbjct: 9   KRTMMCGEPREEHVGKKITLMGWVQRNRKLGALEFVDLRDKTGIMQVVFGEEINAEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK VRSE+ + + G V+ R  E++N N+ TG +EL  + I+ILS +E  P+ +  + +  
Sbjct: 69  AKGVRSEYCVAVTGEVVKR--ESVNENMPTGFVELKCENIKILSESETPPIYIKEDLDAA 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  +HK    R++   ++R  +   NF++  TPIL+ SSPEGARD+L
Sbjct: 127 ENIRLKYRYLDLRRSDMHKIFEIRSKTTKAIRDYLEENNFLDVETPILSKSSPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYPGMFYALPQSPQIFKQLLMVSGFDRYYQIAKCFRDEDLRANRQP-EFTQVDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI+   E ++  VF++ +  + V     R+ + DA+ +YG+DKPDLR  + + N
Sbjct: 246 SFVEQEDIMAVNEGLIAHVFKKVAGVD-VQLPIKRMTFKDAMEKYGSDKPDLRFGMEITN 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F VF   +          +   G    R   D++ E+ ++    GLA+I  
Sbjct: 305 ITEDVKDLDFVVFKSAIEAGGSVRALCLKC-GADLGRKPLDKLGEFVKTYKAKGLAWIQI 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D          +AK L    T +I   ++ + GD+   +A             R  +A
Sbjct: 364 KED-----GVKSSIAKFLTDDVTNSIVKTMNAETGDAILIVADKNSVVFQSLGALRLELA 418

Query: 422 QELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           ++  +I + N F F WI +FP +E++EEE++    H+PFT P         +D  ++++ 
Sbjct: 419 KQFDLIKDKNEFNFTWITEFPLFEYSEEEERYKACHHPFTAPMDEDLDFIESDPGNVRSK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H + +  + F  +G++ EVV  RFG L +AF+ G PPHGG+A
Sbjct: 479 AYDLVLNGEELGGGSIRIHDTALQERMFRALGLTDEVVNERFGYLLQAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DR++M L G +N+++V  FP +QN    L  +P+ V  +QL ELG+ I+   +K  K
Sbjct: 539 FGLDRMIMFLAGTENIKDVIAFPKNQNAYCYLSEAPNIVDEKQLTELGIAILPKEEKNDK 598


>gi|326336300|ref|ZP_08202471.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691474|gb|EGD33442.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 582

 Score =  608 bits (1569), Expect = e-172,   Method: Composition-based stats.
 Identities = 225/595 (37%), Positives = 338/595 (56%), Gaps = 19/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACF 59
            YRTH+CG L  + +   V LSGWV R+R  G +I++D+RD YGITQ++ +    D A F
Sbjct: 1   MYRTHTCGALNSAHLSEQVTLSGWVQRIRNKGFMIWIDLRDRYGITQLIFDEERTDKAVF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E AK++  E V+ I G V+ R A  +NANI TG+IE+    + +L+ +E  P  +    +
Sbjct: 61  EQAKTLSREDVIQIQGTVIKREA--VNANIPTGEIEILVTALTLLNHSEVPPFTIEDNTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR  + +N++ R ++   +R  + A+ FIE  TP+L  S+PEGARD
Sbjct: 119 GGEDLRMKYRYLDIRRTPVRENLIFRHKVGMMVRNYLSAQGFIEVETPVLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNAGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVEQ+DI+ T E + + + +E       +  F R+ Y +A++ YG DKPD+R  +  
Sbjct: 238 EMSFVEQEDIIQTFEGLAKHLLKELKGLEFGA--FPRMTYAEAMKTYGNDKPDIRFGMKF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             + +   H +F+VF++   V                 R   D + EW +    G  GL 
Sbjct: 296 GELNDLAQHRDFKVFNEAELVVG-----IAVPGANSYTRKEIDALVEWVKRPQIGASGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+    D          V K  +  + +A   R   + GD    ++G   K     +  R
Sbjct: 351 YVKCNEDG----TFKSSVDKFYSEDDLKAWAERTGAKAGDLICILSGKANKVRGQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ LG+ N + +   W++DFP  EWNEEE +    H+PFT P+     L   D  ++
Sbjct: 407 MELAERLGLRNPDVYAPLWVVDFPLLEWNEEENRFFAMHHPFTSPKPEDIPLLDTDPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG E+  G IR    E+  + F+ +G + +  + +FG L  AF+ G PPHG
Sbjct: 467 RANAYDLVLNGNEVGGGSIRIFDRELQAKMFALLGFTPDQAQAQFGFLMNAFRYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+A G DR+V LL G + +R+   FP + +  D+++ +PS +   QL+EL +++ 
Sbjct: 527 GLAFGFDRLVALLGGQETIRDFIAFPKNNSGRDVMIDAPSPIDEVQLKELNIQLA 581


>gi|291009610|ref|ZP_06567583.1| aspartyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 605

 Score =  608 bits (1569), Expect = e-172,   Method: Composition-based stats.
 Identities = 241/609 (39%), Positives = 345/609 (56%), Gaps = 24/609 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+IF+D+RD  G+ QVV        E A  
Sbjct: 2   RTHEAGSLRAGHAGQSVTLAGWVARRRDHGGVIFIDLRDASGVAQVVFREGEMA-ERAHR 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ L I G V+ R     N  I TG IE++A ++E+LS +  LP P+    E  E  
Sbjct: 61  LRSEFCLRITGEVVRRPEGNENPEIGTGDIEVTATELEVLSESAPLPFPLDEHLEVGEET 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR+   K +  R+ +    R  +   +F+E  TP +T S+PEGARDFL+P+
Sbjct: 121 RLRHRYLDLRRNGPAKAMRMRSEVNRIARDVLHGRDFVEVETPTMTRSTPEGARDFLIPA 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G++YALPQ+PQ +KQLLM  G +RYFQIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 181 RLQPGNWYALPQSPQLFKQLLMVGGLERYFQIARCYRDEDFRADRQP-EFTQLDIEMSFV 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E ++  ++ E +          R+ Y DA+ R+GTDKPDLR  + +  +TE
Sbjct: 240 DQDDVIELGEEIISALWRETAGHEI-PRPIQRMTYADAMARFGTDKPDLRFGLELTEMTE 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAY+   + 
Sbjct: 299 YFADTPFRVFRAP------YVGAVVMPGGADQPRRQLDAWQDWAKQRGAKGLAYVL--VG 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G ++  GPVAK+L+    + +   +    GD  FF AGD     +    AR  I +  
Sbjct: 351 QDGTLS--GPVAKNLSDGERDGLVKAVGAAPGDCVFFAAGDRSSSRALLGAARLEIGERC 408

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE-------KKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           G+I+ + + F W++D P +E  ++         +    H+PFT P         +D  + 
Sbjct: 409 GLIDHDAWSFVWVVDAPMFESIDDTDDVAVGSGRWTAVHHPFTSPNADWVDNFESDPANA 468

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+ YD+VCNG EI  G IR H S+V  + F  +GIS+E  +++FG L  AF+ G PPHG
Sbjct: 469 LAWAYDIVCNGNEIGGGSIRIHRSDVQKRVFELLGISEEQAQDKFGFLLEAFKYGPPPHG 528

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           GIA G DRI MLL GA ++R+V  FP S    D L G+PS ++VEQ +E G+    + K 
Sbjct: 529 GIAFGWDRICMLLAGADSLRDVIAFPKSGGGYDPLTGAPSPITVEQRKEAGV----DAKP 584

Query: 598 ILKISVTTI 606
             K+   +I
Sbjct: 585 AAKVGDESI 593


>gi|237785605|ref|YP_002906310.1| aspartyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|259511854|sp|C4LIW2|SYD_CORK4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|237758517|gb|ACR17767.1| Aspartyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 597

 Score =  608 bits (1569), Expect = e-172,   Method: Composition-based stats.
 Identities = 246/610 (40%), Positives = 345/610 (56%), Gaps = 29/610 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH  RTH  G+L    VG  V LSGWV R R HGG+IF+D+RD  G+ QVV   DS    
Sbjct: 1   MH--RTHLAGELRSHHVGQTVTLSGWVARRRDHGGVIFIDLRDRSGLAQVVF-RDSDVAA 57

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--- 117
            A  +RSE+ + + G+V +R   + N N+ +G IEL+  ++ IL+ +E LP  +  +   
Sbjct: 58  QAHHLRSEYCIRVTGVVDARPEGSENPNLDSGAIELNVNELTILNSSEALPFQIDDQSSS 117

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            E  E  R KYR+LDLRR T H  +V R+ +  + R  ++  +F E  TP LT S+PEGA
Sbjct: 118 GEVGEETRLKYRYLDLRRKTQHDALVLRSNVNQAARSVLLKHDFHEIETPTLTRSTPEGA 177

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RDFLVP+R+  GSFYALPQ+PQ +KQLLM  G +RYFQIA C+RDED R+DR P EF QL
Sbjct: 178 RDFLVPARLRPGSFYALPQSPQLFKQLLMVGGMERYFQIARCYRDEDFRADRQP-EFTQL 236

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV+QDD+++  E +L  +++E      +     R+ Y DA++ YG+DKPDLR  I
Sbjct: 237 DVEMSFVDQDDVISVAEEILTAIWKEIG--YDIPTPIPRMTYADAMKYYGSDKPDLRFDI 294

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            +   TE F ++ FRVF         Y    +   G    R   D   +WA+ +G  GLA
Sbjct: 295 KIVECTEFFANTTFRVFQNP------YVGAIVMEDGASQPRRQLDAWQDWAKQRGAKGLA 348

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI   + + G ++  GPVAK++     E I   +  + GD  FF AGD     +    AR
Sbjct: 349 YIL--VGDDGQLS--GPVAKNITDAEREGIADHVGAKPGDCIFFAAGDAKSSRALLGAAR 404

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGME 467
             +A++LG+I    + F W++D P +E   +                 H+ FT P+    
Sbjct: 405 GEVARKLGLIKEGDWAFTWVVDAPLFEPAADATAEGDVALGHSAWTAVHHAFTSPKPECM 464

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D  S  ++ YD+VCNG EI  G IR H S+V  + F+ +GIS E  + +FG L  
Sbjct: 465 DSFDKDPGSALSYAYDIVCNGNEIGGGSIRIHRSDVQQRVFNVMGISDEEAQEKFGFLLE 524

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           A + G PPHGGIA G DRIV LL G +++R+V  FP S    D L  +P+ ++ EQ +E 
Sbjct: 525 AMKFGAPPHGGIAFGWDRIVSLLGGFESIRDVIAFPKSGGGVDPLTDAPAPITPEQRKES 584

Query: 588 GLRIVENPKK 597
           G+      K+
Sbjct: 585 GIDAKPKKKE 594


>gi|78188900|ref|YP_379238.1| aspartyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|97196622|sp|Q3AS30|SYD_CHLCH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78171099|gb|ABB28195.1| aspartyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 605

 Score =  608 bits (1569), Expect = e-172,   Method: Composition-based stats.
 Identities = 291/600 (48%), Positives = 396/600 (66%), Gaps = 9/600 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FE 60
           +R+R+HSCG L  +     VRL+GWVHR R HGG+IF+D+RDH GI Q+V  P+    F 
Sbjct: 12  NRFRSHSCGLLNATFEQQHVRLAGWVHRKRDHGGLIFIDLRDHTGICQLVIQPEQQALFA 71

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ + +E V+ ++G V+ R+   IN  + +G+IE+    + I S A  LP  V  E   
Sbjct: 72  EAEHLHNESVISVEGTVILRAENAINPRLSSGEIEVVISCMSIESNAHPLPFSVADELPT 131

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR+ LH+NI+ R+R+  ++R  +  +NF E  TPILT+SSPEGARDF
Sbjct: 132 SEELRLKYRFLDLRREKLHENIIFRSRLTAAVRRYLEEKNFTEIQTPILTSSSPEGARDF 191

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GF RYFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 192 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFPRYFQIAPCFRDEDARADRSPGEFYQLDME 251

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQ+++   +E +L  +    S        F RI Y D + R+GTDKPDLR P+ + 
Sbjct: 252 MAFIEQENLFEILEGMLEHITSTMSKKRITQVPFPRISYRDVMNRFGTDKPDLRIPLEIQ 311

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT  FV S F+VF+K  +V        +    G  +R F D+  + A+  G  GLAYI 
Sbjct: 312 DVTSLFVDSGFKVFAK-NTVPGCCVKALVVKGRGNESRLFYDKAEKRAKELGSAGLAYIQ 370

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           ++     +    GP+ K L+  +  A++  L+++ GD  FF AG     C      RN+ 
Sbjct: 371 FK-----DEGAKGPLVKFLSEDDMNALKQHLNLEQGDVVFFGAGKWEVTCKIMGGMRNYF 425

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A +L  ++ +   FCWI+DFP YE+NEE KKIDF+HNPF+MPQG ME+L+  D L I A+
Sbjct: 426 A-DLFTLDKDELSFCWIVDFPMYEYNEEAKKIDFSHNPFSMPQGEMEALETKDALDILAY 484

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  E+M +AF+  G S+E V+ RFG +  AF+ G PPHGGIA
Sbjct: 485 QYDIVCNGIELSSGAIRNHKPEIMYKAFAIAGYSREEVDQRFGHMIEAFKLGAPPHGGIA 544

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DR+VM+L   +N+REV  FPM+Q   DL+M +PS V++ QLREL L++ E PKK  K
Sbjct: 545 PGLDRLVMILCDEQNIREVIAFPMNQQAQDLMMSAPSEVTLAQLRELHLKV-ELPKKEEK 603


>gi|170759107|ref|YP_001788374.1| aspartyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|238688786|sp|B1L096|SYD_CLOBM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169406096|gb|ACA54507.1| aspartate--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 593

 Score =  608 bits (1569), Expect = e-172,   Method: Composition-based stats.
 Identities = 230/594 (38%), Positives = 344/594 (57%), Gaps = 12/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG+   +++G  V + GWV R R  GG+IF+D+RD  GI Q+V     +   FE 
Sbjct: 9   KRTIMCGEPRENNIGQKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           + +V+SE+ + + G ++ R   + N ++ TG +EL  + I+ILS +E  P+ +    +  
Sbjct: 69  SDNVKSEYCIAVTGEIVKRQ--SPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDAS 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + K  + R +    +R  +    F+E  TPILT S+PEGARD+L
Sbjct: 127 ENIRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR  +G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+E+DD++   E +L  VF+E +  + V     R+ Y  A+ +YG+DKPDLR  + +++
Sbjct: 246 SFIEEDDVIELNERLLAKVFKEVAGID-VKLPIERMPYKIAMEKYGSDKPDLRFGMEIND 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE   +SEF+VF   +                   R   D++ ++ ++    GLA+I +
Sbjct: 305 LTEAVKNSEFKVFKGAIEAGGSVRAIK-AGNCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE        P+AK L     +AI  ++D + GD    +A             R H+A
Sbjct: 364 KEDE-----IKSPIAKFLTEEEMKAILEKMDAKVGDLILIVADKNNVVFESLGALRLHLA 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL IIN + F F WI +FP   +NEEE +    H+PFT        L   D   ++A  
Sbjct: 419 KELDIINKDEFRFVWITEFPLLSYNEEEGRYQAEHHPFTALMDEDVELLDTDPGKVRAKA 478

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H S++  + F+ +G +KE    RFG L  AF+ G PPHGG+A 
Sbjct: 479 YDIVLNGEELGGGSIRIHDSKLQEKMFNVLGFTKEKAWERFGFLLEAFKFGPPPHGGLAY 538

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR++M L G +N+++V  FP +QN    L  +P+ V   QL ELG++ +E  
Sbjct: 539 GLDRMIMFLAGTENIKDVITFPKNQNAFCPLTEAPNVVDENQLEELGIKKIEKE 592


>gi|296107056|ref|YP_003618756.1| aspartyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|295648957|gb|ADG24804.1| aspartyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 580

 Score =  608 bits (1569), Expect = e-172,   Method: Composition-based stats.
 Identities = 224/577 (38%), Positives = 329/577 (57%), Gaps = 4/577 (0%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAKSVRSEWVLCIDGL 76
              + + GWVH  R HGG+IFLDIRD  G+ QVV  P+    F IA+ +RSE+V+ + G+
Sbjct: 2   DKQITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAEKLRSEFVVRVTGI 61

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V  R    IN  + TG++E+   ++EIL+ +   P      +   E +R+KYR++DLRR 
Sbjct: 62  VRKRPEGMINDKMETGRVEVIGTQLEILNQSPTPPFLPDDHQIINEDLRYKYRYIDLRRA 121

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R ++ + +R  +  +NF++  TP+LT ++PEGARD+LVPSRV+ G FYALPQ
Sbjct: 122 VMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVPSRVHPGQFYALPQ 181

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF QLD+EM+F+ ++DIL  +E +
Sbjct: 182 SPQLFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAFINEEDILQLIEGL 240

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           L+ VF+E  N         R+ Y +A+ RYG+DKPDLRNP+ + ++ +     +F VFS 
Sbjct: 241 LKIVFKEILNITLPDKL-PRMSYKEAMTRYGSDKPDLRNPLELIDIADLVKDCDFNVFSS 299

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
             + N G  V      G   +R   D   ++    G  GLAYI      +G      P+ 
Sbjct: 300 AANDNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVNDLSAGMAGLQSPIL 359

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K L+    ++I  R++ Q GD  FF A             RN +  +  +IN + ++  W
Sbjct: 360 KFLSETAVQSILNRVEAQTGDVIFFGADKAHVVNESMGALRNKLGHDRNLIN-SGWQLLW 418

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           ++D+P +E + +  K+   H+PFT PQ        +      A  YD+V NG+EI  G I
Sbjct: 419 VVDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTLAKAYDIVINGYEIGGGSI 478

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  E+    F  +GI ++    +FG L  A Q G PPHGGIA GIDR+ MLL  + ++
Sbjct: 479 RIHQPELQKTVFDLIGIGEQEAHEKFGFLLDALQYGAPPHGGIALGIDRLAMLLTDSTSI 538

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           R+V  FP +Q     L  +PS     QL ELG+R+  
Sbjct: 539 RDVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLAP 575


>gi|302380375|ref|ZP_07268845.1| aspartate--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|303233682|ref|ZP_07320336.1| aspartate--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302311865|gb|EFK93876.1| aspartate--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302495116|gb|EFL54868.1| aspartate--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 588

 Score =  608 bits (1569), Expect = e-172,   Method: Composition-based stats.
 Identities = 233/588 (39%), Positives = 346/588 (58%), Gaps = 10/588 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG+L +SDV   V L GWV + R  G +IF+D+RD+ GITQ+    D    F+ AK
Sbjct: 9   RTHMCGELRLSDVNKEVILMGWVQKERNLGSLIFIDLRDNTGITQIAIKDDNKEIFDKAK 68

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V+SE+VLC+ G V  R  E+ N NI TG+IE+ A ++ IL  A   P+ +  +    E+
Sbjct: 69  DVKSEYVLCVKGDVRER--ESKNNNIPTGEIEVIANELIILDTANVPPIYIKDDDNAQEA 126

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLR+  L  N+  R +    +R  +    F E  TP L   +PEGARD+LV 
Sbjct: 127 VRLKYRYLDLRKPKLQNNLKLRAKTNKLIREYLDENGFYEIETPFLGKPTPEGARDYLVA 186

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN+ SFYALPQ+PQ  KQLLM SG DRY+QI  CFRDED R++R P EF Q+DMEMSF
Sbjct: 187 SRVNEHSFYALPQSPQLMKQLLMISGMDRYYQIVKCFRDEDLRANRQP-EFTQVDMEMSF 245

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+Q+D++   E +++ +F+E    +       R+ Y +A+ RYG DKPDLR    + N+T
Sbjct: 246 VDQEDVMTINEGLIKKLFKEIRGIDI-PTPIKRMTYSEAMERYGCDKPDLRFGFELKNIT 304

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E    SEF+VFS     N       I       +R   D++ ++ +  G  GL++I    
Sbjct: 305 ELVKDSEFKVFSSCNEKNKSVRCINIGNYESEYSRKKIDKLEKFVKEYGAKGLSWIRVHD 364

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E         + K L+     +I       +    F +A       +  +  RN IA++
Sbjct: 365 GE-----IQSSIKKFLSDEELNSIIESTKEDENALIFILADKNDVVFNGLSALRNKIARD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           + +++ + FEF WI+DFP +E++EEE +    H+PFTMP+         D   ++A  YD
Sbjct: 420 MNLVDNDTFEFVWIVDFPLFEYDEEENRFVAMHHPFTMPKEEDIQYLLTDKEKVRAKAYD 479

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +VCNG EI  G IR + S++  + F  + +++E++EN+FG    AF  G PPHGG+A G+
Sbjct: 480 IVCNGDEIGGGSIRINNSDLQKKMFEALELTEEMIENKFGFFVEAFNYGTPPHGGLAYGM 539

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           DR++MLL+G  N+++V  FP +Q+  DLL G+P+ V  +QL+E+ +++
Sbjct: 540 DRLMMLLVGTDNIKDVIAFPKTQSATDLLTGAPTNVDEKQLKEIHIKL 587


>gi|239980703|ref|ZP_04703227.1| aspartyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291452562|ref|ZP_06591952.1| aspartyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291355511|gb|EFE82413.1| aspartyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 594

 Score =  608 bits (1568), Expect = e-172,   Method: Composition-based stats.
 Identities = 290/600 (48%), Positives = 397/600 (66%), Gaps = 10/600 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVGS VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +   E
Sbjct: 1   MHRYRSHTCGELRASDVGSDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAAE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +   +  E V+ +DG V+SR  E +N  + TG+IE+    +E+L  A  LP  +  E   
Sbjct: 61  LLDKLSKETVVRVDGQVVSRGTENVNPELPTGEIEIEVSDVEVLGEAAPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+++R +M A  F E +TPIL A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILAATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +F EF  G  V++ F RI + +++ +YG DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFRPIEKLMTELFTEFGGGREVTSPFPRIPFRESMLKYGNDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F  S F+ F+        +          G +R F D + ++A  QG  GLA++ 
Sbjct: 301 DITDVFADSGFKAFA------GKHVRALPVPDTAGQSRKFFDGLGDYAVEQGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ + G ++  GP+AK L   +   +  RL ++ G + FF AG+  +     +  R   
Sbjct: 354 -RVGDDGALS--GPIAKFLTEDDVAVLTERLGLKPGHAVFFGAGEFDEVSKIMSAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G    N F FCWI+DFP YE +EE  KI+F+HNPF+MPQGGM+ L+  D L I A+
Sbjct: 411 AKRSGHFEENVFRFCWIVDFPMYEKDEETGKIEFSHNPFSMPQGGMQDLEEKDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  EVML+AF   G  +E VE  F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGIELSSGAIRNHEPEVMLKAFEIAGYERETVEREFAGMLRAFRLGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++ +      K
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELEESRLRELNIQLRKPVADKAK 590


>gi|315612036|ref|ZP_07886953.1| aspartate--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315838|gb|EFU63873.1| aspartate--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 587

 Score =  608 bits (1568), Expect = e-172,   Method: Composition-based stats.
 Identities = 234/596 (39%), Positives = 349/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   LD++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQAE-LTAALDLEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|322386522|ref|ZP_08060149.1| aspartate--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269441|gb|EFX52374.1| aspartate--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 584

 Score =  608 bits (1568), Expect = e-172,   Method: Composition-based stats.
 Identities = 233/597 (39%), Positives = 348/597 (58%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  + L GWV R R  GG+IF+D+RD  GI Q+V NP+S   E+ 
Sbjct: 1   MKRSMYAGRVRSEHVGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPESVSDEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E +N  + TG +EL    + +L+ A+  P  +    E
Sbjct: 61  KTAESLRSEFVIEVTGKVAAR--EQVNDKLATGSVELHVDSLIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP LT S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA+I
Sbjct: 297 QDLTELVKDVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +++E +   L +++ D   F+A       +     R  
Sbjct: 353 KLAGGE-----LTGPVAKFLTDLSSE-LTTALQLEENDLVLFVADTLDVANAALGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +ELG+I+   F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LGKELGLIDPAKFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQRDSEQELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E  +++FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEAQDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS V+  QL EL L++  + K
Sbjct: 527 ALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSLVAPAQLEELSLQVESHEK 583


>gi|268317897|ref|YP_003291616.1| aspartyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262335431|gb|ACY49228.1| aspartyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 619

 Score =  608 bits (1568), Expect = e-172,   Method: Composition-based stats.
 Identities = 245/609 (40%), Positives = 350/609 (57%), Gaps = 16/609 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           +H  RTH+CG+L  + VG  V L GWV   R  GG+IF+D+RD YG+TQ+V +P  +   
Sbjct: 13  LHGPRTHTCGELRRAHVGQEVVLKGWVDTRRDLGGVIFIDLRDRYGLTQIVFSPQDNETA 72

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           + +A  +RSE+V+ + G+V  RS ET+N  + TG++E+ A  + IL+ +E LP PV    
Sbjct: 73  YRLADRLRSEYVISVRGVVRERSPETVNPKLATGEVEVRAHDLIILNTSEPLPFPVSAHE 132

Query: 119 E----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
           E      E +R KYR+LDLRR  L +N++ R ++    R    A  F+E  TP+LT S+P
Sbjct: 133 EKRTTTSEELRLKYRYLDLRRPELQRNLLLRHQVYLITRRYFDAHQFVEVETPVLTKSTP 192

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EGARDFLVPSR++ G FYALPQ+PQ YKQ+LM +G DRYFQI  CFRDED R+DR P EF
Sbjct: 193 EGARDFLVPSRLHPGKFYALPQSPQLYKQILMVAGLDRYFQIVKCFRDEDLRADRQP-EF 251

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            Q+D+EM+F  ++ I   +E +++ ++ E      +   F R+ YD+A+RR+G+DKPD R
Sbjct: 252 TQIDVEMTFPTEEQIFELIEGLIQAIWRETLGVE-LPRPFPRMSYDEALRRFGSDKPDTR 310

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA--RSQG 352
             + +  + E F  S FRVF  +L          +P  G  G R + DR+++    +  G
Sbjct: 311 FGLELQEIGEVFRGSGFRVFESVLEQGGEIVALVVPGMGDQG-RGYMDRLDKDVVRKQIG 369

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
             GL Y  ++L   G           L     +    +L  + GD    +AG   +    
Sbjct: 370 AGGLVY--FKLPSDGGPIYSSVKEHVLPSAYVQRAVAKLGARAGDLVLLLAGPRPQVYLQ 427

Query: 413 AADARNHIAQELGIINCNC---FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
           A   R H+A+EL ++       + F W+ DFP  EW+EE  +    H+PFT P      L
Sbjct: 428 AGALRLHMARELNLVPPAGQAPWHFLWVTDFPLLEWDEEAGRYFAMHHPFTSPHPDDLDL 487

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              +   ++A  YDLV NG EI  G IR H  ++  + F  +GI +E  E RFG L  AF
Sbjct: 488 LETEPGRVRARAYDLVLNGNEIGGGSIRIHRQDIQRRMFRVLGIDEEEAERRFGFLLTAF 547

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGGIA G+DRIVMLL GA ++R+V  FP +Q   +L+  +P  VS EQL EL +
Sbjct: 548 RYGAPPHGGIALGLDRIVMLLAGAGSLRDVIAFPKTQRGQELMSNAPDEVSPEQLEELHI 607

Query: 590 RIVENPKKI 598
           R+V    + 
Sbjct: 608 RVVLPETEA 616


>gi|134098612|ref|YP_001104273.1| aspartyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|166225424|sp|A4FBC3|SYD_SACEN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|133911235|emb|CAM01348.1| aspartyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 606

 Score =  608 bits (1568), Expect = e-172,   Method: Composition-based stats.
 Identities = 241/609 (39%), Positives = 345/609 (56%), Gaps = 24/609 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+IF+D+RD  G+ QVV        E A  
Sbjct: 3   RTHEAGSLRAGHAGQSVTLAGWVARRRDHGGVIFIDLRDASGVAQVVFREGEMA-ERAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ L I G V+ R     N  I TG IE++A ++E+LS +  LP P+    E  E  
Sbjct: 62  LRSEFCLRITGEVVRRPEGNENPEIGTGDIEVTATELEVLSESAPLPFPLDEHLEVGEET 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR+   K +  R+ +    R  +   +F+E  TP +T S+PEGARDFL+P+
Sbjct: 122 RLRHRYLDLRRNGPAKAMRMRSEVNRIARDVLHGRDFVEVETPTMTRSTPEGARDFLIPA 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G++YALPQ+PQ +KQLLM  G +RYFQIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 182 RLQPGNWYALPQSPQLFKQLLMVGGLERYFQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E ++  ++ E +          R+ Y DA+ R+GTDKPDLR  + +  +TE
Sbjct: 241 DQDDVIELGEEIISALWRETAGHEI-PRPIQRMTYADAMARFGTDKPDLRFGLELTEMTE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAY+   + 
Sbjct: 300 YFADTPFRVFRAP------YVGAVVMPGGADQPRRQLDAWQDWAKQRGAKGLAYVL--VG 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G ++  GPVAK+L+    + +   +    GD  FF AGD     +    AR  I +  
Sbjct: 352 QDGTLS--GPVAKNLSDGERDGLVKAVGAAPGDCVFFAAGDRSSSRALLGAARLEIGERC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE-------KKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           G+I+ + + F W++D P +E  ++         +    H+PFT P         +D  + 
Sbjct: 410 GLIDHDAWSFVWVVDAPMFESIDDTDDVAVGSGRWTAVHHPFTSPNADWVDNFESDPANA 469

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+ YD+VCNG EI  G IR H S+V  + F  +GIS+E  +++FG L  AF+ G PPHG
Sbjct: 470 LAWAYDIVCNGNEIGGGSIRIHRSDVQKRVFELLGISEEQAQDKFGFLLEAFKYGPPPHG 529

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           GIA G DRI MLL GA ++R+V  FP S    D L G+PS ++VEQ +E G+    + K 
Sbjct: 530 GIAFGWDRICMLLAGADSLRDVIAFPKSGGGYDPLTGAPSPITVEQRKEAGV----DAKP 585

Query: 598 ILKISVTTI 606
             K+   +I
Sbjct: 586 AAKVGDESI 594


>gi|227496189|ref|ZP_03926495.1| aspartate--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226834272|gb|EEH66655.1| aspartate--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 599

 Score =  608 bits (1568), Expect = e-172,   Method: Composition-based stats.
 Identities = 235/604 (38%), Positives = 339/604 (56%), Gaps = 32/604 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT + G L  +D+G  V L+GWV R R HGG+ F+D+RD  GI QVV        E+A  
Sbjct: 3   RTRTAGSLRRTDIGQTVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVIR-----EEVAHD 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----Y 120
           +R+E+VL + G V +R     N N+ TG+IE+    +EIL+ +  LP  V    E     
Sbjct: 58  LRAEYVLQVTGEVSARPEGNANPNLPTGEIEVVVSDVEILNPSAPLPFQVSDHAEDAGSV 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR ++   I  R+++  + R  + + +F+E  TP LT S+PEGARDF
Sbjct: 118 GEEARLKYRYLDLRRSSMQHAIRLRSQVSQAARKVLASHDFVEIETPTLTRSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 178 LVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIE 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D++   E+VL+ V+        +      + Y DA+ +YG+DKPDLR  + + 
Sbjct: 237 MSFVEQEDVIKVAEDVLKEVWALIG--YDLPTPIPHMTYKDAMEKYGSDKPDLRFGLELT 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++TE+F  + FRVF         Y    +   G   +R   D   EWA+ +G  GLAY+ 
Sbjct: 295 DLTEYFKDTTFRVFQN------EYVGSVVMPGGASQSRRTFDAWQEWAKQRGAKGLAYVT 348

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +   GPVAK++       +      + GD+ FF AG      +    AR  I
Sbjct: 349 --VSEDGELG--GPVAKNITEAERAGLAEAAGAKPGDAIFFAAGGVDASRALLGAARLEI 404

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGMESLK 470
            +  G+I+ + + F W++D P ++ + E K               H+ FT P+       
Sbjct: 405 GKRCGLIDEDAWSFVWVVDAPLFKPSAEAKAEGDVALGKSAWTAVHHAFTSPKPEWLDSF 464

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D     A+ YD+VCNG EI  G IR H ++V  + F+ +GI +E  + +FG L  AF+
Sbjct: 465 DKDPGHALAYAYDIVCNGNEIGGGSIRIHRNDVQKRVFNVMGIGEEEAQAKFGFLLDAFK 524

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DRIV LL  A ++R+V  FP S    D L  +P+ ++ EQ +E G+ 
Sbjct: 525 FGAPPHGGIAFGWDRIVSLLTHADSIRDVIAFPKSGGGYDPLTDAPAPITPEQRKEAGVD 584

Query: 591 IVEN 594
            V  
Sbjct: 585 TVPE 588


>gi|313825350|gb|EFS63064.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
          Length = 606

 Score =  608 bits (1567), Expect = e-171,   Method: Composition-based stats.
 Identities = 230/603 (38%), Positives = 330/603 (54%), Gaps = 25/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++       +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKIIG--VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF         Y    +   G    R   D   EWAR++G  GLAYI     
Sbjct: 300 FFANTAFRVFQAP------YVGAVVMPGGASLPRRQFDAWQEWARTRGAKGLAYITI--- 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            S      GPVAK+++      I  ++  + GD+ FF AG           AR  I +  
Sbjct: 351 -SDEGVPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P +E  +E                 H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFEPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G  +   
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587

Query: 595 PKK 597
           PKK
Sbjct: 588 PKK 590


>gi|293364654|ref|ZP_06611375.1| aspartate--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702912|ref|ZP_07639860.1| aspartyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291316912|gb|EFE57344.1| aspartate--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623592|gb|EFO02581.1| aspartyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 587

 Score =  608 bits (1567), Expect = e-171,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 348/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGTVELNVTALTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQAE-LTAALGLEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|307610179|emb|CBW99730.1| aspartyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 580

 Score =  608 bits (1567), Expect = e-171,   Method: Composition-based stats.
 Identities = 223/577 (38%), Positives = 329/577 (57%), Gaps = 4/577 (0%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAKSVRSEWVLCIDGL 76
              + + GWVH  R HGG+IFLDIRD  G+ QVV  P+    F IA+ +RSE+V+ + G+
Sbjct: 2   DKQITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAEKLRSEFVVRVTGI 61

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V  R    IN  + TG++E+   ++EIL+ +   P      +   E +R+KYR++DLRR 
Sbjct: 62  VRKRPEGMINDKMETGRVEVIGTQLEILNQSPTPPFLPDDHQIINEDLRYKYRYIDLRRA 121

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R ++ + +R  +  +NF++  TP+LT ++PEGARD+LVPSRV+ G FYALPQ
Sbjct: 122 VMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVPSRVHPGQFYALPQ 181

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P EF QLD+EM+F+ ++DIL  +E +
Sbjct: 182 SPQLFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-EFTQLDIEMAFINEEDILQLIEGL 240

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           L+ VF+E  N         R+ Y +A+ RYG+DKPDLRNP+ + ++ +     +F VF+ 
Sbjct: 241 LKIVFKEILNITLPDKL-PRMSYKEAMTRYGSDKPDLRNPLELIDIADLVKDCDFNVFAS 299

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
             + N G  V      G   +R   D   ++    G  GLAYI      +G      P+ 
Sbjct: 300 AANDNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVNDLSAGMAGLQSPIL 359

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K L+    ++I  R++ Q GD  FF A             RN +  +  +IN + ++  W
Sbjct: 360 KFLSETAVQSILNRVEAQTGDVIFFGADKAHVVNESMGALRNKLGHDRNLIN-SGWQLLW 418

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           ++D+P +E + +  K+   H+PFT PQ        +      A  YD+V NG+EI  G I
Sbjct: 419 VVDWPMFELDPQSNKLQPMHHPFTSPQELSAETLRSKPTQTLAKAYDIVINGYEIGGGSI 478

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  E+    F  +GI ++    +FG L  A Q G PPHGGIA GIDR+ MLL  + ++
Sbjct: 479 RIHQPELQKTVFDLIGIDEQEAHEKFGFLLDALQYGAPPHGGIALGIDRLAMLLTDSTSI 538

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           R+V  FP +Q     L  +PS     QL ELG+R+  
Sbjct: 539 RDVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLAP 575


>gi|313203172|ref|YP_004041829.1| aspartyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312442488|gb|ADQ78844.1| aspartyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 590

 Score =  608 bits (1567), Expect = e-171,   Method: Composition-based stats.
 Identities = 236/598 (39%), Positives = 340/598 (56%), Gaps = 17/598 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FE 60
            +RTH+CG+L +++VG    LSGWV R R  GG+ F+DIRD YGITQ+V N D     F+
Sbjct: 1   MFRTHTCGELRLTNVGQQTTLSGWVQRARKMGGMTFVDIRDRYGITQLVFNQDVNAALFD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  RS +  NANI TG++E+   ++ IL+ ++  P  +    + 
Sbjct: 61  TANKLGREYVIRVSGEVAERSNK--NANIPTGEVEILVSELSILNESKTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR+ + +N+  R RI   +R  +   NF+E  TPIL  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRNNVRENLELRHRITFELRRYLDQMNFLEVETPILIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGEFYALPQSPQLFKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+LN  E +++ +F+   N +     F R+ ++D ++ YG+DKPD+R  +   
Sbjct: 238 MSFVEQEDVLNLFEGMMKHLFKFVKNIDFTEA-FPRMTWEDGMKYYGSDKPDIRFEMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAY 358
            + E     +F VF  +  V              G  R   D + ++ +    G  GL Y
Sbjct: 297 ELKEAVSGHDFVVFDSVPYVGG-----ICATGCAGYTRKQLDELTDFVKRPQIGAKGLVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I    D          V K  +  + + I      Q GD    +AG+  K      + R 
Sbjct: 352 IRCEADG----TFKSSVDKFYSADDLKQIASLFKAQPGDLILILAGEKRKTQKALCELRL 407

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +   LG  N + +   WI+DFP +EW+E+ ++    H+PFT P      L   D  +++
Sbjct: 408 EMGARLGYRNKDVYAPLWIIDFPLFEWDEDTQRFYATHHPFTSPNLDDIPLLETDPGAVR 467

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G IR H S +  Q F ++G + E  E +FG L  AFQ G PPHGG
Sbjct: 468 ATAYDMVINGVELGGGSIRIHDSALQHQMFKHLGFTPEQAEAQFGFLMSAFQYGAPPHGG 527

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G+DR+V L  G  ++R+   FP + +  D++  SPST++  QL EL L +   P+
Sbjct: 528 LAFGLDRLVSLFAGLDSIRDCIAFPKNNSGRDVMADSPSTIAQAQLDELNLVVDLKPQ 585


>gi|293400601|ref|ZP_06644746.1| aspartate--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305627|gb|EFE46871.1| aspartate--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 581

 Score =  608 bits (1567), Expect = e-171,   Method: Composition-based stats.
 Identities = 218/591 (36%), Positives = 338/591 (57%), Gaps = 12/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L +SD G  V L GWV + R  G ++F+D+RD  GITQ+V   D    E  K 
Sbjct: 3   RTHTNGELRLSDTGKEVTLLGWVAKRRNFGALVFIDLRDRTGITQLVF--DETLAEQIKD 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E++L + G V+ R  +  N  + TG IE+   ++ I++ AE  P+ V  + +  E  
Sbjct: 61  VRNEYILQVSGTVLERKDK--NPKLATGDIEVKVNEVSIINSAETTPIIVADDTDALEDT 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  +   ++ R +I +SMR  + +++FIE  TP+L  S+PEGARD+LVPS
Sbjct: 119 RLKYRYLDLRRPIMQNKLMMRHKITHSMREYLDSKDFIEIETPMLGRSTPEGARDYLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ GSFYALPQ+PQ YKQLLM SGF+RY+Q A CFRDED R+DR   +F Q+D+E SF+
Sbjct: 179 RVHPGSFYALPQSPQLYKQLLMVSGFERYYQFARCFRDEDLRADRQ-TDFTQVDLETSFL 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              +I   ME +L+ + ++    +  S  F R+ +++A+ RYG+DKPD R  + + ++TE
Sbjct: 238 SDVEIQTMMEEMLQKLMKDVKGMDI-SIPFPRLTWEEAMNRYGSDKPDNRFAMELQDITE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F +  F+VF   ++     +   +P K     R   D++ E A+  G  GL  + +   
Sbjct: 297 LFTNCGFKVFQDCIANAGSIKAVVVPDK-ASMTRKEIDKITELAKKNGAKGLVTLKYL-- 353

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
              N    GP+ K L+     A+  RL +++ D    ++      C      RNH    L
Sbjct: 354 ---NGEVSGPIVKFLSEDEIHALIERLTLKENDLVLIVSDKWRITCEVLGALRNHFGSLL 410

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G+   + F + W+ DFP +E++EE+ +    H+PFT P+         D   + A  YD+
Sbjct: 411 GLKKKDEFSYLWVTDFPMFEYSEEDGRWYAMHHPFTRPRDEDMQYIDTDPGKVHAIAYDV 470

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG+E+  G +R +   +  + F  +G ++E ++  FG    A + G PPHGG+A G+D
Sbjct: 471 VLNGYELGGGSLRIYDGAMQDKMFEVLGFTEEKIQENFGWFVDALKYGTPPHGGLAFGLD 530

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           RI M+L  + ++R+V  FP + N    +  +P+ V  EQL+EL + I E  
Sbjct: 531 RIAMILSESDSIRDVIAFPKNANAKCPMSDAPTPVDEEQLQELHITITEKE 581


>gi|168181744|ref|ZP_02616408.1| aspartate--tRNA ligase [Clostridium botulinum Bf]
 gi|237796510|ref|YP_002864062.1| aspartyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|259511853|sp|C3KTB6|SYD_CLOB6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|182675105|gb|EDT87066.1| aspartate--tRNA ligase [Clostridium botulinum Bf]
 gi|229260573|gb|ACQ51606.1| aspartate--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 593

 Score =  607 bits (1566), Expect = e-171,   Method: Composition-based stats.
 Identities = 230/594 (38%), Positives = 344/594 (57%), Gaps = 12/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG+   +++G  V + GWV R R  GG+IF+D+RD  GI Q+V     +   FE 
Sbjct: 9   KRTIMCGEPRENNIGEKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           + +V+SE+ + + G ++ R   + N ++ TG +EL  + I+ILS +E  P+ +    +  
Sbjct: 69  SDNVKSEYCIAVTGEIVKRQ--SPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDAS 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  + K  + R +    +R  +    F+E  TPILT S+PEGARD+L
Sbjct: 127 ENVRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR  +G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE+DD+++  E +L  VF+E +  + V     R+ Y  A+ +YG+DKPDLR  + +++
Sbjct: 246 SFVEEDDVIDLNEKLLAKVFKEVAGID-VKLPIERMPYKIAMEKYGSDKPDLRFGMEIND 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE   +SEF+VF   +                   R   D++ ++ ++    GLA+I +
Sbjct: 305 LTEAVKNSEFKVFKGAIEAGGSVRAIK-AENCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE        P+AK L     +AI  ++D + GD    +              R H+A
Sbjct: 364 KEDE-----IKSPIAKFLTEEEMKAILEKMDAKVGDLILIVGDKNNVVFESLGALRLHLA 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL IIN + F F WI +FP   +NEEE +    H+PFT        L   D   ++A  
Sbjct: 419 KELDIINKDEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIDLLDTDPGKVRAKA 478

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H S++  + FS +G +KE    RFG L  AF+ G PPHGG+A 
Sbjct: 479 YDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGLAY 538

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR++M L G +N+++V  FP +QN    L  +P+ V   QL ELG++ +E  
Sbjct: 539 GLDRMIMFLAGTENIKDVITFPKNQNAFCPLTEAPNVVDENQLEELGIKKIEKE 592


>gi|148652798|ref|YP_001279891.1| aspartyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|254781745|sp|A5WE50|SYD_PSYWF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148571882|gb|ABQ93941.1| aspartyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 601

 Score =  607 bits (1566), Expect = e-171,   Method: Composition-based stats.
 Identities = 226/604 (37%), Positives = 345/604 (57%), Gaps = 14/604 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG +  + +   + ++GW+HR R HGG+IFLD+RD  GI QVV +PD+   F  A 
Sbjct: 3   RTEYCGAVTEALLEQTITITGWIHRRRDHGGVIFLDMRDRAGILQVVVDPDTPEAFVTAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
           + RSE+VL I G V  R   T NAN+ +G +EL A++I +L+ +E  P P+  E     E
Sbjct: 63  AARSEYVLKITGRVRKRYEGTENANMTSGNVELLAKEIVVLAKSETPPFPLNDENISVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LD+RR  + + +V R +  +++R  +  + F++  TPILT ++PEGARD+LV
Sbjct: 123 DLRLKYRYLDMRRPEMQERMVFRAKATSTIRRYLDDQGFLDVETPILTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRTRPGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ ++DI++  E +++ +F+   + +     F R+ Y +A+R Y +DKPDLR P+ + +V
Sbjct: 242 FLSEEDIMDINEGLIQNLFKTMLDVD--LGKFPRMTYAEAMRDYASDKPDLRIPLKLIDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     +F+VF+   +   G         GG   R   D   ++    G  GLAYI   
Sbjct: 300 ADLMQSVDFKVFAGPANDPKGRVAALRVPNGGSLTRKQIDEYTKYVGIYGARGLAYIKVN 359

Query: 363 LDE------SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
                            P+ K+++     ++  R   QDGD  FF A             
Sbjct: 360 DASNINNGVDKESGLQSPIIKNMSDEVLVSLIERTGAQDGDIIFFGADKAKIVNDAMGAL 419

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  I  ++ +  C  +   W++DFP +E  ++  K    H+PFTMP+G +E LK +   +
Sbjct: 420 RVKIGLDMNMETCE-WAPLWVVDFPMFEETDD-GKWTSMHHPFTMPKGSVEELKNS-PET 476

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  YD+V NG EI  G +R +  E+    F  +GIS+E    +F  L  A + G PPH
Sbjct: 477 ALSIAYDMVLNGTEIGGGSLRINTVEMQRAVFDALGISEEEANEKFSFLLDALKFGAPPH 536

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V   QLRELG+R+ E  +
Sbjct: 537 GGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTQAPAEVDSRQLRELGIRVREKAQ 596

Query: 597 KILK 600
              K
Sbjct: 597 AENK 600


>gi|118471914|ref|YP_887321.1| aspartyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|166225364|sp|A0QWN3|SYD_MYCS2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|118173201|gb|ABK74097.1| aspartyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 598

 Score =  607 bits (1566), Expect = e-171,   Method: Composition-based stats.
 Identities = 234/612 (38%), Positives = 335/612 (54%), Gaps = 27/612 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G L  +D G  V L+GWV R R HGG+IF+D+RD  G++QVV   +      A  
Sbjct: 3   RTHAAGSLRPADAGQTVTLAGWVARRRDHGGVIFIDLRDASGVSQVVF-REGDVLAAAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R     N  I TGQIE++A ++ +L  +    LP   + +  E  
Sbjct: 62  LRAEFCVAVTGVVEVRPEGNENPEIPTGQIEVNATELTVLGESAP--LPFQLDEQAGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+     +  R+++  + R  +   +F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRREGPGNALRLRSKVNAAARSVLAEHDFVEIETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           E DD++   E VL+ V+        +     RI Y++A+RR+G+DKPDLR  I +   TE
Sbjct: 239 EADDVIAISEQVLKAVWATIG--YDLPLPLPRISYEEAMRRFGSDKPDLRFGIELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   E+A+ +G  GLAY+   + 
Sbjct: 297 YFKDTTFRVFQAP------YVGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVL--VG 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L+    + +   +    GD  FF AG      +     R  IA+ L
Sbjct: 349 EDGTLG--GPVAKNLSDAERDGLVAHVGANPGDCIFFAAGPAKGARALLGATRIEIAKRL 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
            +I+ N + F W++DFP +E  +E                 H+ FT P+        +D 
Sbjct: 407 DLIDPNAWAFTWVVDFPMFEAADEATAAGDVAVGSGAWTAMHHAFTAPKPDSVDTFDSDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  +  YD+VCNG EI  G IR H  ++  + F+ +GI  +  + +FG L  AF  G P
Sbjct: 467 GNALSDAYDIVCNGNEIGGGSIRIHRRDIQERVFAMMGIDHDEAQEKFGFLLDAFSYGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRI  LL G  ++REV  FP S    D L  +P+ ++ +Q +E G+     
Sbjct: 527 PHGGIAFGWDRITALLAGVDSIREVIAFPKSGGGVDPLTDAPAPITPQQRKESGIDAKPR 586

Query: 595 PKKILKISVTTI 606
             K  K    + 
Sbjct: 587 EDKP-KEDAKSK 597


>gi|226950483|ref|YP_002805574.1| aspartate--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|254781725|sp|C1FKE5|SYD_CLOBJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226841119|gb|ACO83785.1| aspartate--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 593

 Score =  607 bits (1566), Expect = e-171,   Method: Composition-based stats.
 Identities = 231/594 (38%), Positives = 345/594 (58%), Gaps = 12/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG+   +++G  V + GWV R R  GG+IF+D+RD  GI Q+V     +   FE 
Sbjct: 9   KRTIMCGEPRENNIGEKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           + +V+SE+ + + G ++ R   + N ++ TG +EL  + I+ILS +E  P+ +    +  
Sbjct: 69  SDNVKSEYCIAVTGEIVKRQ--SPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDAS 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  + K  + R +    +R  +    F+E  TPILT S+PEGARD+L
Sbjct: 127 ENVRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR  +G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE+DD+++  E +L  VF+E +  + V     R+ Y  A+ +YG+DKPDLR  + +++
Sbjct: 246 SFVEEDDVIDLNEKLLAKVFKEVAGID-VKLPIERMPYKIAMEKYGSDKPDLRFGMEIND 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE   +SEF+VF   +                   R   D++ ++ ++    GLA+I +
Sbjct: 305 LTEAVKNSEFKVFKGAIEAGGSVRAIK-AENCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE        P+AK L     +AI  ++D + GD    +A             R H+A
Sbjct: 364 KEDE-----IKSPIAKFLTEEEMKAILEKMDAKVGDLILIVADKNNVVFESLGALRLHLA 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL IIN + F F WI +FP   +NEEE +    H+PFT        L   D   ++A  
Sbjct: 419 KELDIINKDEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIDLLDTDPGKVRAKA 478

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H S++  + FS +G +KE    RFG L  AF+ G PPHGG+A 
Sbjct: 479 YDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGLAY 538

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR++M L G +N+++V  FP +QN    L  +P+ V   QL ELG++ +E  
Sbjct: 539 GLDRMIMFLAGTENIKDVITFPKNQNAFCPLTEAPNVVDENQLEELGIKKIEKE 592


>gi|170077050|ref|YP_001733688.1| aspartyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|238692810|sp|B1XNY9|SYD_SYNP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169884719|gb|ACA98432.1| aspartyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 596

 Score =  607 bits (1566), Expect = e-171,   Method: Composition-based stats.
 Identities = 234/602 (38%), Positives = 339/602 (56%), Gaps = 18/602 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CGDL    +   V L GWV R R HGG+IF+D+RD  GI Q+V++P      +  A
Sbjct: 2   RTHYCGDLRSEHIDQTVTLYGWVDRRRDHGGVIFIDLRDRTGIVQIVSDPQRTPDSYNDA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL----PVFGER 118
            + RSE+V+ I G V +R     N  + TG++E+ A  IEIL+   +             
Sbjct: 62  DASRSEYVVKIVGKVSARQEGAKNPKLPTGEVEIYADTIEILNGVHKQLPILVSSSADGD 121

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGA 177
           +  E +R KYR+LDLRR+T+ KN+  R  ++ SMR  +   ENF+E  TPILT S+PEGA
Sbjct: 122 QVKEDLRLKYRYLDLRRETMAKNLQLRHTVVKSMRRFLEDDENFMEVETPILTRSTPEGA 181

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRVN G +YALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QL
Sbjct: 182 RDYLVPSRVNPGDWYALPQSPQLFKQLLMVAGCDRYYQIARCFRDEDLRADRQP-EFTQL 240

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF+  D+I++  E ++  +F++      +   F RI Y +++ +YG D+PD R  +
Sbjct: 241 DMEMSFMSFDEIIDLNERLICRIFQDAQGIE-LERPFPRITYAESMEKYGCDRPDTRFGL 299

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQP 354
            + NV++      F+VFS  +      +V  IP      +         +   A   G  
Sbjct: 300 ELVNVSDIVADMGFKVFSGAVKSGGQVKVLPIPNGNDAISNVRIKPGGDLFNAAVEMGAK 359

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GLA+I  R+ E G +  +G +  +L+    + +  R   + G    F AG          
Sbjct: 360 GLAFI--RVREDGAIDTIGAIKDNLSDAQKQELLSRTGAEAGTLLLFGAGATDIVNKSLD 417

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  +  E+G+IN N   F W+ DFP +E+N +EK+++  H+PFT P          DL
Sbjct: 418 RVRQLVGAEMGLINENQLNFVWVTDFPMFEYNSDEKRLEALHHPFTAPNPEDL----EDL 473

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            + +A  YD+V NG EI  G +R +  EV  + F  +G+S+   + +FG L  AF+ G P
Sbjct: 474 ATARALAYDIVLNGIEIGGGSLRIYQREVQEKVFQTIGLSETEAQEKFGFLLEAFEYGTP 533

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VML+    ++R+V  FP +Q    LL  +P+ V  +QL+EL +     
Sbjct: 534 PHGGIAYGLDRLVMLMAQEDSIRDVIAFPKTQQASCLLTDAPAGVDQKQLKELFVASTAP 593

Query: 595 PK 596
            K
Sbjct: 594 EK 595


>gi|259046696|ref|ZP_05737097.1| aspartate--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036592|gb|EEW37847.1| aspartate--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 587

 Score =  607 bits (1566), Expect = e-171,   Method: Composition-based stats.
 Identities = 236/594 (39%), Positives = 341/594 (57%), Gaps = 11/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M R RT  CG +    VG  V L GWV + R HGG+IF+D+RD  GI QVV NP  +   
Sbjct: 3   MKR-RTEYCGLISEKLVGQTVTLDGWVAKRRDHGGVIFIDLRDREGIMQVVFNPARNQEA 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           FEIA+ +RSE+V+ + G V  R     N N+ TG+ EL   ++E+ S A+  P+ +  E+
Sbjct: 62  FEIAEKLRSEYVIQVTGEVAYRGEGLENPNLKTGKFELLVDEVEVFSKAKTSPIYIDDEQ 121

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E +R KYR+LD+RR  + +N+  R +   S+R  +  E +I+  TPIL  S+PEGAR
Sbjct: 122 KPSEELRLKYRYLDIRRRPVLENLRLRHKTTKSIREYLDGEGYIDVETPILAKSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV++GSFYALPQ+PQ +KQLLM +G DRY+QI  CFRDED R DR P EF Q+D
Sbjct: 182 DYLVPSRVHEGSFYALPQSPQTFKQLLMGAGLDRYYQIVRCFRDEDLRGDRQP-EFTQVD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+  ++I   ME +L+ V ++  +   V   F RI + +A+ RYG DKPD R  + 
Sbjct: 241 IETSFLSAEEIQEMMEGLLKKVMKDTLDVE-VQTPFPRISFAEAMARYGNDKPDTRFDLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V++    S+ +VFS  +      +V  +       +R   D + ++    G  GLA+
Sbjct: 300 LIDVSDIMKESDLKVFSSCIENGGEVKVLNLKGLADEYSRKDADSLADFVAKFGAKGLAW 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I    D        GP+AK +      A R R++ + GD  FF A  P       ++ R 
Sbjct: 360 IKVEED-----GLKGPIAKFIVNQE-SAFRERINAEVGDIVFFCADKPSVVAQSLSELRL 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           H  ++  +I+ N F F W++D+P  E + EE +    H+PFT P         +D    K
Sbjct: 414 HFGKKHNLIDTNKFNFLWVVDWPLLEHDAEEDRYVAMHHPFTRPVSEDFQALIDDPAGAK 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +   +    F  +G +KE  E++FG L  A   G PPHGG
Sbjct: 474 AQAYDIVLNGYELGGGSLRIYRRNMQEAMFKVLGFTKESAESQFGFLLDALDYGFPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           IA G+DR+VMLL G  N+REV  FP + +  D +  +PS VS +QL EL L+I 
Sbjct: 534 IALGLDRLVMLLAGEDNIREVIAFPKNSSAVDPMTQAPSEVSAKQLDELSLKIK 587


>gi|298245177|ref|ZP_06968983.1| aspartyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297552658|gb|EFH86523.1| aspartyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 602

 Score =  607 bits (1566), Expect = e-171,   Method: Composition-based stats.
 Identities = 243/596 (40%), Positives = 358/596 (60%), Gaps = 9/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
           +R+ +CG+L   D+   V LSGWV+R R HGG+IFLD+RD YG+TQV+ +P+      +I
Sbjct: 7   FRSATCGELTAKDIDREVTLSGWVNRRRDHGGLIFLDLRDRYGLTQVICDPERSREAHQI 66

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EY 120
           A  VRSE+V+ + GLV  R   T N  + TG+IE+ AQ IEIL+ +   P P+  +  + 
Sbjct: 67  ASEVRSEYVVQVKGLVKHRLPGTENTQLPTGEIEIVAQSIEILNYSRTTPFPINSDAIQV 126

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  +  NI+ R RI+  MR  +    F+E  TPIL  S+PEGARD+
Sbjct: 127 DEPLRLKYRYLDLRRPHMRDNIILRHRIVKEMRDYLDERGFLEIETPILMKSTPEGARDY 186

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+ +G FYALPQ+PQQ KQLLM +G DRYFQIA CFRDED R+DR P EF QLD+E
Sbjct: 187 LVPSRLYEGEFYALPQSPQQLKQLLMVAGLDRYFQIARCFRDEDQRADRQP-EFTQLDVE 245

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FV ++D++  +E++L  + E+ +        F  + + +A+ RYGTD PDLR  + + 
Sbjct: 246 MAFVSEEDVMGLIEDMLIKLIEKTTKKRIKQRPFPHLSFKEAMDRYGTDHPDLRFDLPLV 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +++      F VF   LS +   +   +P  G    R   D + E+AR+ G  GL  + 
Sbjct: 306 EISDLAAAGTFGVFKSALSASGMVKGLKVP-GGASYTRKEVDEITEFARTLGAKGL--VQ 362

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +    P+ K +     +AI  RL+ Q GD   F+A             R  +
Sbjct: 363 LAIQEGGTIK--SPLTKFMAPEEVQAIVERLEGQPGDLLLFVADSAKVANDVLFRLRVKM 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ L  I+      CW++DFP + ++E+ ++ D  HNPF+           ++ L I+A 
Sbjct: 421 AERLKQIDPEEMALCWVVDFPLFHYDEDLQRYDAEHNPFSGMDEAHIERLDSNPLDIRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD++CNGFE+  G +R +++E+  + FS + +S E ++ +FG +  AF+ G PPHGGIA
Sbjct: 481 QYDIICNGFEVGGGSVRINVAELQRKVFSLMKMSDEQIQEQFGHMLEAFEYGAPPHGGIA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VML     N+REV  FP +Q+  DLLMG+P+ V  +QL EL L++    +
Sbjct: 541 LGVDRLVMLFADEDNIREVIAFPKTQSAQDLLMGAPALVDDKQLNELHLQVRPQAQ 596


>gi|167752819|ref|ZP_02424946.1| hypothetical protein ALIPUT_01080 [Alistipes putredinis DSM 17216]
 gi|167659888|gb|EDS04018.1| hypothetical protein ALIPUT_01080 [Alistipes putredinis DSM 17216]
          Length = 585

 Score =  607 bits (1566), Expect = e-171,   Method: Composition-based stats.
 Identities = 223/598 (37%), Positives = 333/598 (55%), Gaps = 17/598 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            YRTH+CG L  ++V   V L+GWV +VR  G + F+D+RD YGITQ+V    S      
Sbjct: 1   MYRTHTCGQLRAANVNETVTLAGWVQKVRNLGAMTFIDLRDRYGITQIVVEEHSPADVKT 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  +  E+VL ++G V+ RS++  N  + TG IE+ A K+ +L  AE  P  +    + 
Sbjct: 61  VADGLGREYVLQVEGRVVERSSK--NPKMPTGDIEVVASKLVVLHEAEVPPFTIEENSDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  L +N++ R ++   +R  +  E F+E  TP L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRPPLQRNMILRHKMAQEIRRFLSDEGFLEIETPYLVNSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR++   FYALPQ+PQ  KQLLM +G+D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMSPNQFYALPQSPQTLKQLLMVAGYDKYFQIVRCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+L   E   + +F E            R+ + +A+ +YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDVLEIFERWAKHMFREVMGIELTEPL-RRMPWIEAMEKYGSDKPDLRFGMEFA 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQPGLAY 358
           ++T+      F VF     V              G  R   D + E+ + Q  G  GL +
Sbjct: 297 DLTDLAQGHGFAVFDDAEYVTGFAATGC-----AGYTRKQIDALTEFVKRQQIGAKGLVW 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  R++  GNV     V K  +     A+  R   + GD    + G   K  +     R 
Sbjct: 352 I--RVEADGNVK--SSVDKFYSPEQVRAMAERAGAKAGDLVLILCGKKFKTLTQLCALRL 407

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +AQ+LG+ +   F   W++DFP +EW++E ++    H+PFT P+        +D   ++
Sbjct: 408 EVAQQLGLRDPKKFAPLWVIDFPLFEWDDETQRYYAVHHPFTSPKLEDVQYLDSDPGRVR 467

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD VCNG EI  G IR H S++  + F  +G + E  + RFG L  AF+ G PPHGG
Sbjct: 468 ANAYDFVCNGTEIGGGSIRIHDSKLQAKMFELLGFTAEQAQERFGFLMNAFKYGAPPHGG 527

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G DR+  L  G++++R+   FP + N  D+++ +P  +   QL EL +++V+  +
Sbjct: 528 LAFGFDRLCSLFGGSESIRDYIAFPKNNNGRDMMLDAPGYIDQAQLDELHIQLVKPEE 585


>gi|225016791|ref|ZP_03705983.1| hypothetical protein CLOSTMETH_00703 [Clostridium methylpentosum
           DSM 5476]
 gi|224950459|gb|EEG31668.1| hypothetical protein CLOSTMETH_00703 [Clostridium methylpentosum
           DSM 5476]
          Length = 593

 Score =  607 bits (1566), Expect = e-171,   Method: Composition-based stats.
 Identities = 224/595 (37%), Positives = 336/595 (56%), Gaps = 13/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RTH C D+ +  VG  V ++G+V + R  G + FLD+RD  GI Q+  +   D   F+ 
Sbjct: 9   KRTHYCNDVRMDCVGQTVVVAGFVQKRRDLGNLAFLDLRDRTGIVQLAFDDASDRTVFDK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A + R+E+VL   G V  R  E+ N ++ TG IE+    + +LS AE  P  +       
Sbjct: 69  ATTCRAEFVLMAKGTVRER--ESKNPDLPTGDIEIFVDDLRVLSEAEVPPFEITDNTNVN 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  + +++  R +I  + R       FIE  TPIL  SSPEGARD+L
Sbjct: 127 EELRLKYRYLDLRRGEMQQSLFMRHKITKAARDYYDENGFIEIETPILIKSSPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G F+ALPQ+PQQYKQL M +GFDRY QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 187 VPSRVHPGKFFALPQSPQQYKQLTMLAGFDRYMQIARCFRDEDLRADRQP-EFTQIDLEM 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD++   E  ++ VF++  + + V     RI Y++A+ R+G+DKPD R  + + +
Sbjct: 246 SFVDVDDVIEVNEGFVQYVFKKILDVD-VQLPLRRIRYEEAMNRFGSDKPDTRFGLELTD 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++   ++EF+VF+  L          +       +R   D++ E+ ++    GLAY  W
Sbjct: 305 LSDLLRNTEFKVFAGALET-GSVRAINVKGGADKLSRKEIDKLVEFVKTYKAKGLAYTRW 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADARNHI 420
             D++          K L+     A+R R++ + GD    +A              R H+
Sbjct: 364 TADKA-----TSSFEKFLSEEEVTALRARMNAEPGDVILVVADPSNAVVFDSLGALRCHL 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A +LG+I  N ++  W+ DFP +E++EEE +    H+PFT           +D +   A 
Sbjct: 419 ADKLGLIEDNSYDLLWVTDFPLFEYDEEEGRYAAKHHPFTAVADEDADKLLSDPVHCHAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDL+ NG E+  G IR +  E+  + F  +G ++E  + +FG L  AF+ G PPHGG+A
Sbjct: 479 AYDLILNGCELGGGSIRINDPEMQSKMFKALGFTEEQAQEQFGFLINAFKYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+DR+VML+LG  ++R+V  FP  QN  +L+   P+ V  +QL EL +  VE  
Sbjct: 539 YGLDRLVMLMLGKPSIRDVIAFPKVQNASELMTQCPAEVDPKQLEELFIETVEKK 593


>gi|322807355|emb|CBZ04929.1| aspartyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 593

 Score =  607 bits (1566), Expect = e-171,   Method: Composition-based stats.
 Identities = 233/594 (39%), Positives = 343/594 (57%), Gaps = 12/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG+   +++G  V + GWV R R  GG+IF+D+RD  GI Q+V     +   FE 
Sbjct: 9   KRTIMCGESRENNIGQKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           + +V+SE+ + + G ++ R   + N ++ TG +EL  + I+ILS +E  P+ +    +  
Sbjct: 69  SDNVKSEYCIAVTGEIVKRQ--SPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDAS 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + K  + R +    +R  +    F+E  TPILT S+PEGARD+L
Sbjct: 127 ENIRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR  +G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE+DD++   E +L  VF+E    + V     R+ Y  A+ +YG+DKPDLR  + +++
Sbjct: 246 SFVEEDDVIELNERLLTKVFKEVGGID-VKLPIERMPYKIAMEKYGSDKPDLRFGMEIND 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE   +SEF+VF   +                   R   D++ ++ ++    GLA+I +
Sbjct: 305 LTEAVKNSEFKVFKGAIEAGGSVRAIK-AENCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE        P+AK L     +AI  ++D + GD    +A             R HIA
Sbjct: 364 KEDE-----IKSPIAKFLTEEEMKAILEKMDAKAGDLILIVADKNNVVFESLGALRLHIA 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL IIN N F F WI +FP   +NEEE +    H+PFT        L   +   ++A  
Sbjct: 419 KELDIINKNEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIELLDTEPGKVRAKA 478

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H S++  + FS +G +KE    RFG L  AF+ G PPHGG+A 
Sbjct: 479 YDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGLAY 538

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR++M L G +N+++V  FP +QN    L  +P+ V   QL ELG++ +E  
Sbjct: 539 GLDRMIMFLAGTENIKDVITFPKNQNAFCPLTEAPNVVDENQLEELGIKKIEKE 592


>gi|322390475|ref|ZP_08063994.1| aspartate--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321142827|gb|EFX38286.1| aspartate--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 584

 Score =  607 bits (1565), Expect = e-171,   Method: Composition-based stats.
 Identities = 232/598 (38%), Positives = 348/598 (58%), Gaps = 17/598 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVREEHIGTRITLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPETVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + GLV +R  E  N N+ TG +EL  + I +L+ A+  P  +    E
Sbjct: 61  ATAESIRSEYVVEVTGLVEAR--EQANPNLPTGAVELKVEAITVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGIE-VTLPFPRMNYDDAMALYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTELVKGVDFKVFSEA----PAVKAIVVKGAADHYSRKDIDKLTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +           GPVAK L  + T  +   L ++D D   F+A       +     R  
Sbjct: 353 KY-----AEGTLNGPVAKFLTDL-TSDLTAALQLEDKDLVLFVADTLEVANATLGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ N + F W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LAKELDLIDNNQYNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETEHELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G +KE    +FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINHKDLQERMFKALGFTKEAANEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L++    ++
Sbjct: 527 AIGLDRFVMLLAGEDNIREVIAFPKNNKATDPMTQAPSVVSEKQLDELNLQVEVAEQE 584


>gi|154508879|ref|ZP_02044521.1| hypothetical protein ACTODO_01390 [Actinomyces odontolyticus ATCC
           17982]
 gi|293192667|ref|ZP_06609621.1| aspartate--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|153798513|gb|EDN80933.1| hypothetical protein ACTODO_01390 [Actinomyces odontolyticus ATCC
           17982]
 gi|292820174|gb|EFF79171.1| aspartate--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 609

 Score =  607 bits (1565), Expect = e-171,   Method: Composition-based stats.
 Identities = 240/614 (39%), Positives = 339/614 (55%), Gaps = 33/614 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G LG   VG  V L+GWV R R HGG+ F+D+RD  GI QVV   +     +A  
Sbjct: 11  RTHNIGTLGTDLVGQTVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVVRDER----VAHE 66

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----FGEREY 120
           +RSE+VL + G V +R     N ++ TG IE+    IEIL+ +  LP  V          
Sbjct: 67  LRSEFVLKVTGEVCARPEGNENPHLATGAIEVMGDDIEILNTSAPLPFQVSSNAEDSGNV 126

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR+     I  R+++  + R  + A +F+E  TP LT S+PEGARDF
Sbjct: 127 GEETRLKYRYLDLRREPEQYAIRLRSKVSRAAREALYARDFVEIETPTLTRSTPEGARDF 186

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R++ GS+YALPQ+PQ +KQLLM +G +RYFQIA C+RDED R+DR P EF QLD+E
Sbjct: 187 IVPARLSPGSWYALPQSPQLFKQLLMVAGMERYFQIARCYRDEDFRADRQP-EFTQLDIE 245

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++   E+VL+ V+        +S    R+ Y DA+ RYG+DKPDLR  + + 
Sbjct: 246 MSFVDQDDVIEVAEDVLKNVWALIG--YDLSTPIPRMTYKDAMERYGSDKPDLRFGLELT 303

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +TE+F  + FRVF         Y    +   GG   R   D+  EWA+++G  GLAY+ 
Sbjct: 304 ELTEYFKDTTFRVFQAP------YVGAVVMPGGGSQPRRTFDKWQEWAKARGAKGLAYVT 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               E G +   GPVAK++     E +        GD  FF AG P         AR  I
Sbjct: 358 IA--EDGTLG--GPVAKNITEAEREGLAAATGANPGDCIFFAAGKPTPSRELLGAARLEI 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWN---EEEKK-------IDFAHNPFTMPQGGMESLK 470
            +   +I+ + + F W++D P ++     E E             H+ FT P+       
Sbjct: 414 GKRCDLIDPDAWAFTWVVDAPLFKPTGDAEAEGDVALGHSAWTAVHHAFTSPKPEWVDSF 473

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  +  A+ YD+VCNG EI  G IR H  ++  + F+ +GI +E  + +FG L  AF+
Sbjct: 474 DKDPGNALAYAYDIVCNGNEIGGGSIRIHRRDIQNRVFNVMGIGEEEAQTQFGFLLDAFK 533

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGG+A G DRIV LL  + ++R+V  FP S    D L  +P+ ++  Q +E G  
Sbjct: 534 YGAPPHGGVAFGWDRIVSLLTKSDSIRDVIAFPKSGGGFDPLTEAPAPITPAQRKEAG-- 591

Query: 591 IVENPKKILKISVT 604
           +   PKK  + +  
Sbjct: 592 VDAKPKKRGEEASE 605


>gi|260583854|ref|ZP_05851602.1| aspartate--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158480|gb|EEW93548.1| aspartate--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 585

 Score =  607 bits (1565), Expect = e-171,   Method: Composition-based stats.
 Identities = 226/592 (38%), Positives = 342/592 (57%), Gaps = 10/592 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
           + R+  CG +    VG  + L GWV + R HGG+IF+D+RD  G+ QVV NP  + A FE
Sbjct: 2   KKRSIYCGLVTEELVGKEITLHGWVQKRRDHGGVIFIDLRDREGVMQVVFNPQHNQAAFE 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA ++R E+V+ + G V  R     N N+ TG +EL   ++E+LS A+  P+ +  ++  
Sbjct: 62  IADTLRPEYVIEVTGTVALRGEGLTNPNLKTGTMELEVHQVELLSKAKTPPIYIEDDKVA 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LD+RR  + +N+  R +   ++R  +  E FI+  TP L  S+PEGARD+
Sbjct: 122 SDELRMKYRYLDMRRKPVLENLRLRHKTTRAIREYLDTEGFIDVETPYLAKSTPEGARDY 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++GSFYALPQ+PQ +KQLLM  G DRY+QI  CFRDED R DR P EF Q+D+E
Sbjct: 182 LVPSRVHEGSFYALPQSPQTFKQLLMGGGLDRYYQIVRCFRDEDLRGDRQP-EFTQVDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  ++I   ME +L+ V ++      V+  F R+ + +A+ RYG DKPD R  + + 
Sbjct: 241 TSFLSAEEIQEMMEGLLKKVMKDTLGVE-VTTPFPRLSFAEAMSRYGNDKPDTRFALELI 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V +    S+ +VFS ++      +   +       +R   D + ++    G  GLA++ 
Sbjct: 300 DVADIVKDSDLKVFSTVVENGGHVKALNLKGLADEYSRKDADSLAQFVAKYGAKGLAWLK 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+AK L    T  +R RLD + GD  FF A  P       ++ R H 
Sbjct: 360 VEED-----GLKGPIAKFLVNQETA-LRERLDAEVGDIIFFCADKPSVVAQSLSELRLHF 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++  +I+ + F F W++D+P  E++E+  +    H+PFT P     +    D  + KA 
Sbjct: 414 GRKHELIDQSKFNFLWVVDWPLLEYDEDANRYVAMHHPFTRPVNEDFNALLEDPAAAKAQ 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  ++    F+ +G +KE  + +FG L  A   G PPHGGIA
Sbjct: 474 AYDIVLNGYELGGGSLRIYRRDMQEAMFNVLGFTKESAQEQFGFLMDALDYGFPPHGGIA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VMLL G  N+REV  FP + +  D +  +PS VS +QL+EL L+I 
Sbjct: 534 LGLDRLVMLLAGEDNIREVIAFPKNGSAMDTMTQAPSPVSEQQLQELSLKIR 585


>gi|254417175|ref|ZP_05030920.1| aspartyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196175981|gb|EDX71000.1| aspartyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 602

 Score =  607 bits (1565), Expect = e-171,   Method: Composition-based stats.
 Identities = 236/606 (38%), Positives = 346/606 (57%), Gaps = 21/606 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L  + VG  V L GWV R R HGG+IFLD+RD  GI Q+V++P      +  A
Sbjct: 2   RTHYCGELRSNHVGETVTLCGWVDRRRDHGGVIFLDLRDRTGIVQIVSDPQRTPDSYPNA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
           ++VR+E+V+ I G V  R  +++N N+ TG++E+ A +I  L+         +       
Sbjct: 62  EAVRNEYVVQITGRVSRRPDDSLNPNLSTGEVEVYADQITPLNTVRKQLPFQVSTADAEA 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LD+RRD + +NI  R  +I ++R  +   ++FIE  TP+LT S+PEGAR
Sbjct: 122 VREDLRLKYRYLDIRRDRMRQNIELRHEVIKAIRRYLEDEQHFIEVETPMLTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G +YALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGQWYALPQSPQLFKQLLMVAGLDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ QD+IL   E ++  +F+     +     F R  Y + + RYGTDKPD R  + 
Sbjct: 241 MEMSFMSQDEILQLNEGLVCHIFKTVKGIDI-PRPFPRFTYAEVMERYGTDKPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR------AFCDRMNEWARSQG 352
           + +V+E    S F+VFS  ++     +V  IP      +          D  NE A +  
Sbjct: 300 LVDVSELLKDSGFKVFSGAVAAGGKVKVLPIPGGNDKISNVRIKPGKSGDLFNEAAAAGA 359

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
           +      + R+ ++  +  +G +  +L+    + +      + G    F AGD       
Sbjct: 360 K---GLAYIRVRDNWEIDTIGAIKDNLSEEQKQKLLEITGAKPGHLLLFGAGDTDVVNKT 416

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               R  + QELG+IN       W+ D+P +EWN +EK+++  H+PFT P          
Sbjct: 417 LDRLRQVLGQELGLINPTKINLLWVTDYPMFEWNADEKRLEAIHHPFTAPHPDDID---- 472

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DL + +A  YDLV NG+E+  G +R +  ++  + F  +G+S E  +N+FG L  AF  G
Sbjct: 473 DLKTARAQAYDLVYNGYEVGGGSLRMYQPDIQRRVFEAIGLSPEEAQNKFGFLLEAFDYG 532

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G+DR+VMLL G +++R+V  FP +Q    LL  +P+ V  +QL+EL +   
Sbjct: 533 APPHGGIAYGLDRLVMLLAGEESIRDVIAFPKTQQASCLLTEAPAQVGEKQLKELHVAST 592

Query: 593 ENPKKI 598
             PKK 
Sbjct: 593 YKPKKA 598


>gi|148244522|ref|YP_001219216.1| aspartyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|146326349|dbj|BAF61492.1| aspartyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 584

 Score =  607 bits (1565), Expect = e-171,   Method: Composition-based stats.
 Identities = 233/592 (39%), Positives = 347/592 (58%), Gaps = 11/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH CG +  SDVG  + + GWV+R R HGG+IFLDIRD  GI QVV NPD+  F +A++
Sbjct: 3   RTHYCGKINTSDVGQIIEIYGWVNRKRNHGGVIFLDIRDIRGIVQVVINPDNKDFSLAET 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL I GLV++R     N  +++G+IE+ AQ IEIL+ ++  P  +       E I
Sbjct: 63  IRNEFVLKISGLVIARDKGLSNPKLVSGEIEIKAQNIEILNTSKPTPFQINA-INTSEEI 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLR + + K +  R+R+ + +R  M   +F++  TP LT ++PEGARD+LVPS
Sbjct: 122 RLRYRYLDLRNNAMQKRLHLRSRVTHYIRKFMDKHDFLDIETPFLTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R + G F+ALPQ+PQ +KQLLM SGF+RY+QI  CFRDED R+DR P EF QLD+E SF+
Sbjct: 182 RTHPGKFFALPQSPQLFKQLLMMSGFERYYQIVKCFRDEDLRADRQP-EFTQLDIETSFM 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +++I+  ME + RG+F+   N + + N F  I Y+DA+ +YG D PD+R PI + ++ +
Sbjct: 241 NENEIMTIMERMTRGLFKSVINVD-LGNKFPTITYEDAMEKYGLDCPDIRIPIQIISIDK 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
              + +F+VFSK  + +         + G   +R   D+  ++    G  GLAYI    +
Sbjct: 300 LMKNVDFKVFSKPANNSNSRVAALKISGGASISRKNIDKYTKYVGIYGAKGLAYIKLNKN 359

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
                    P+ K L+   T  I      + GD  FF A           + R  IA++L
Sbjct: 360 -----GPTSPILKFLDDEITNKIIEITGAKTGDIIFFGADKTKIVNESLGNLREKIAKDL 414

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            + +   +   W++DFP +  N +   ++  H+PFT P    E+LK     +  +  YDL
Sbjct: 415 NLFDT-QWAPIWVVDFPMFGIN-DNGSLNATHHPFTAPIVDKETLKQT-AKTAFSRAYDL 471

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG EI  G IR H  E+       +GIS +  +++FG L  A + G PPHGG+A G+D
Sbjct: 472 VINGSEIGGGSIRIHQVEMQKTVLKLLGISNQEAQDKFGFLLDALEYGCPPHGGMAFGLD 531

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           R+VM++ G  N+R+V  FP +Q    LL  +P+ V  + LREL ++I    K
Sbjct: 532 RLVMIMTGTDNIRDVIAFPKTQTATCLLTDAPANVPKKLLRELNVKISLPKK 583


>gi|312866779|ref|ZP_07726992.1| aspartate--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097562|gb|EFQ55793.1| aspartate--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 584

 Score =  607 bits (1565), Expect = e-171,   Method: Composition-based stats.
 Identities = 231/598 (38%), Positives = 348/598 (58%), Gaps = 17/598 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGCVREEHIGTRITLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPETVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+++RSE+V+ + GLV +R  E  N N+ TG +EL  + I +L+ A+  P  +    E
Sbjct: 61  ATAENIRSEYVVEVTGLVEAR--EQANPNLPTGAVELKVEAITVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGIE-VTLPFPRMNYDDAMALYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTELVKGVDFKVFSEA----PAVKAIVVKGAADHYSRKDIDKLTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +           GPVAK L  + T  +   L ++D D   F+A       +     R  
Sbjct: 353 KYAEGALN-----GPVAKFLTDL-TSDLTAALQLEDKDLVLFVADTLEVANATLGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ N + F W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LAKELDLIDNNQYNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETEHELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G +KE    +FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINHKDLQERMFKALGFTKEAANEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L++    ++
Sbjct: 527 AIGLDRFVMLLAGEDNIREVIAFPKNNKATDPMTQAPSVVSEKQLDELNLQVEVAEQE 584


>gi|297588537|ref|ZP_06947180.1| aspartate--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297573910|gb|EFH92631.1| aspartate--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 588

 Score =  607 bits (1565), Expect = e-171,   Method: Composition-based stats.
 Identities = 232/588 (39%), Positives = 347/588 (59%), Gaps = 10/588 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACFEIAK 63
           RTH CG+L +SDV   V L GWV + R  G +IF+D+RD+ GITQ+   + +   F+ AK
Sbjct: 9   RTHMCGELRLSDVNKEVILMGWVQKERNLGSLIFIDLRDNTGITQIAIKDNNKEIFDKAK 68

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V+SE+VLC+ G V  R  E+ N NI TG+IE+ A ++ +L  A   P+ +  +    E+
Sbjct: 69  DVKSEYVLCVKGDVRER--ESKNNNIPTGEIEVIANELIVLDTANVPPIYIKDDDNAQEA 126

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLR+  L  N+  R +    +R  +    F E  TP L   +PEGARD+LV 
Sbjct: 127 VRLKYRYLDLRKPKLQNNLKLRAKTNKLIRDYLDENGFYEIETPFLGKPTPEGARDYLVA 186

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN+ SFYALPQ+PQ  KQLLM SG DRY+QI  CFRDED R++R P EF Q+DMEMSF
Sbjct: 187 SRVNEHSFYALPQSPQLMKQLLMISGMDRYYQIVKCFRDEDLRANRQP-EFTQVDMEMSF 245

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+Q+D++   E +++ +F+E    +       R+ Y +A+ RYG DKPDLR    + N+T
Sbjct: 246 VDQEDVMTLNEGLIKKLFKEIRGIDI-PTPIKRMTYAEAMERYGCDKPDLRFGFELKNIT 304

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E    SEF+VFS     N       I       +R   D++ ++ +  G  GL++I    
Sbjct: 305 ELVKDSEFKVFSSCNDKNKSVRCINIGNYESEYSRKKIDKLEKFVKEYGAKGLSWIRVHD 364

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E         + K L+     +I       +    F +A       +  +  RN IA++
Sbjct: 365 GE-----IQSSIKKFLSDEEMNSIIESTKEDENALIFILADKNDVVFNGLSALRNKIARD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           + +++ + FEF WI+DFP +E++EEE +    H+PFTMP+         D   ++A  YD
Sbjct: 420 MNLVDNDTFEFVWIVDFPLFEFDEEENRFVAMHHPFTMPKEEDIQYLLTDKEKVRAKAYD 479

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +VCNG EI  G IR + S++  + F  + +++E++EN+FG    AF  G PPHGG+A G+
Sbjct: 480 IVCNGDEIGGGSIRINNSDLQKKMFEALELTEEMIENKFGFFVEAFNYGTPPHGGLAYGM 539

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           DR++MLL+G  N+++V  FP +Q+  DLL G+PS V  +QL+E+ +++
Sbjct: 540 DRLMMLLVGTDNIKDVIAFPKTQSATDLLTGAPSNVDEKQLKEIHIKL 587


>gi|169833717|ref|YP_001695474.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|238688324|sp|B1I9S9|SYD_STRPI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|168996219|gb|ACA36831.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 587

 Score =  607 bits (1565), Expect = e-171,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 348/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTSIQAE-LTTALSLEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|110598222|ref|ZP_01386498.1| aspartyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110340137|gb|EAT58636.1| aspartyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 615

 Score =  607 bits (1565), Expect = e-171,   Method: Composition-based stats.
 Identities = 292/597 (48%), Positives = 392/597 (65%), Gaps = 9/597 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFE 60
           +R+R+  CG L      S VRL GWVHR R HGG+IF+D+RDH GI+Q+V  P+    FE
Sbjct: 22  NRFRSEYCGLLSPELEHSTVRLGGWVHRKRDHGGLIFIDLRDHTGISQLVIQPEQHDLFE 81

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  + SE V+CI+G V+ RS  TIN  + +G+IE+   ++ + S A+ LP PV  E + 
Sbjct: 82  AAGQLHSESVICIEGEVVLRSPSTINPKLASGEIEVVVSRLTVESNAQPLPFPVADEVQT 141

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRF+DLRR+ +H+NI+ R+R+  ++R  +    FIE  TPILT+SSPEGARDF
Sbjct: 142 SEELRLKYRFIDLRREKIHENIIFRSRLTAAIRRYLEEREFIEIQTPILTSSSPEGARDF 201

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 202 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQLDME 261

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQDD+   +E ++  +    S        F RI Y D + R+GTDKPDLR PI + 
Sbjct: 262 MAFIEQDDLFAILEGMVEHLTRTMSEKRITQFPFPRISYKDVMNRFGTDKPDLRIPIEIS 321

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT  FV+S F+VF+         +   +  +G   +R F D+  + AR  G  GLAYI 
Sbjct: 322 DVTSLFVNSSFKVFASNTVPGTCVKALLLKGRG-HESRLFYDKAEKRARELGSGGLAYIQ 380

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +R          GPV K L+  +   ++  L ++ GD  FF AG   + C      R + 
Sbjct: 381 FR-----EEGPKGPVVKFLSEEDLATLKSHLGVETGDVVFFGAGKWEQTCRIMGGMRTYF 435

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +L  ++ +   FCWI+DFP +E+NEE KKIDF+HNPF+MPQG ME+L+    L I A+
Sbjct: 436 G-DLFTLDKDELSFCWIVDFPMFEYNEEAKKIDFSHNPFSMPQGEMEALETKSPLDILAY 494

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  ++M +AF   G  KE V+ RFG +  AF+ G PPHGGIA
Sbjct: 495 QYDIVCNGIELSSGAIRNHRPDIMYKAFEIAGYPKEEVDLRFGHMIEAFKLGAPPHGGIA 554

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VM+L   +N+REV  FPM+Q+  DL+M SPS V+ +QL+EL LR+ E PKK
Sbjct: 555 PGLDRLVMILRDEQNIREVIAFPMNQSAQDLMMSSPSEVTPQQLKELHLRV-ELPKK 610


>gi|320093764|ref|ZP_08025612.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319979301|gb|EFW10796.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 664

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 239/611 (39%), Positives = 346/611 (56%), Gaps = 33/611 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +H  RTH+ G LG   +G  V L+GWV R R HGG+ F+D+RD  GI QVV   +S    
Sbjct: 65  LHVLRTHTIGSLGKDLIGQTVTLTGWVDRRRDHGGVAFVDLRDASGIAQVVVRDES---- 120

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--- 117
           +A  +RSE+VL + G V++R     N N+ TG IE+    IEIL+ +  LP  V      
Sbjct: 121 VAHELRSEFVLKVTGEVVARPEGNENPNLPTGAIEVMGDDIEILNPSAPLPFQVSSHAED 180

Query: 118 -REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                E +R KYR+LDLRR+   + +  R+ +  + R  + A +F+E  TP LT S+PEG
Sbjct: 181 SGNVGEEVRLKYRYLDLRREPEQRALRLRSMVSRAARDTLYAHDFVEIETPTLTRSTPEG 240

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ +KQ+LM +G +RYFQIA C+RDED R+DR P EF Q
Sbjct: 241 ARDFIVPARLAPGSWYALPQSPQLFKQMLMVAGMERYFQIARCYRDEDFRADRQP-EFTQ 299

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+EMSFV+QDD++   E+VLR V+        ++    R+ Y DA+ RYG+DKPDLR  
Sbjct: 300 LDIEMSFVDQDDVIAVAEDVLRNVWALIG--YDLATPIPRMTYKDAMERYGSDKPDLRFG 357

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           + +  +T++F  + FRVF         Y    +   GG   R   D+  EWA+++G  GL
Sbjct: 358 LELTELTDYFKDTPFRVFQAP------YVGAVVMPGGGSQPRRTFDKWQEWAKARGAKGL 411

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+   + E G +   GPVAK+++    E +      + GD  FF AG P         A
Sbjct: 412 AYVT--VAEDGALG--GPVAKNISEAEREGLAEATGAKPGDCIFFAAGKPTPSRELLGAA 467

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWN---EEEKK-------IDFAHNPFTMPQGGM 466
           R  I +  G+++ + + F W++D P ++     E E             H+ FT P+   
Sbjct: 468 RLEIGKRCGLVDPDAWAFTWVVDAPLFKPTGDAEAEGDVALGHSAWTAVHHAFTSPKPEW 527

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
                 D  +  A+ YD+VCNG EI  G IR H  +V  + F+ +GI +E  + +FG L 
Sbjct: 528 VDSFDEDPGNALAYAYDIVCNGNEIGGGSIRIHRRDVQNRVFAVMGIGEEEAQAQFGFLL 587

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            AF+ G PPHGG+A G DRIV LL  ++++R+V  FP S    D L  +P+ ++  Q +E
Sbjct: 588 DAFKFGAPPHGGVAFGWDRIVALLTKSESIRDVIAFPKSGGGYDPLTDAPAPITPAQRKE 647

Query: 587 LGLRIVENPKK 597
            G  +   P+K
Sbjct: 648 AG--VDAEPRK 656


>gi|77360870|ref|YP_340445.1| aspartate tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|97196809|sp|Q3IIN7|SYD_PSEHT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|76875781|emb|CAI87002.1| aspartate tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 592

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 209/592 (35%), Positives = 326/592 (55%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CG L  + V   V L GW+++ R  GG+IF+D+RD  G+ QVV + D       A 
Sbjct: 2   RSIYCGQLNKTHVDQEVELCGWINKRRDLGGLIFVDLRDREGLVQVVFDSDIEELMSSAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R E+ + + G+V +R    +N ++ TG+IE+   ++ I++ +E   LP+   +   E 
Sbjct: 62  TLRQEFCVQLKGIVRARPDSQVNKDMPTGEIEILGTELNIINRSEP--LPLDFNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 RRLKYRYLDLRRLEMSDRIKLRAKASSFVRRFLDENGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    E ++R +++   N +    +F  + Y +A+  YG+DKPDLRNP+ + ++ 
Sbjct: 239 MSSDQVRGMTEKMIREMWQTLLNVD--LGDFPIMPYSEAMSLYGSDKPDLRNPMKLVDIA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +   G         G   +R   D   ++    G  G+A++    
Sbjct: 297 DLVKDVEFNVFSGPANDEKGRVAVLTVPGGAKLSRKQLDDYTKFIGIYGAKGMAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L       +  R + Q GD   F A             R  I  +
Sbjct: 357 HTAGAEGVQSPVAKFLTADVITQLLERTNAQSGDIILFGADKRNTVNEAMGALRVKIGID 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I N + +   W++DFP +E + +E  +   H+PFT P+    S    +  +  +  YD
Sbjct: 417 LEITNLDSWAPLWVVDFPMFEED-DEGTLHAVHHPFTAPKDMSASELEANPAAAISDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +++   AF  +GI+++  +++FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNADMQEAAFRILGINEQEQQDKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G  N+R+V  FP +     LL  +PS  + + L EL + +VE  
Sbjct: 536 DRLAMLLCGTDNIRDVIAFPKTTQASCLLTNAPSKPNADSLAELAISVVEKA 587


>gi|289423169|ref|ZP_06424984.1| aspartate--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156500|gb|EFD05150.1| aspartate--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 593

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 226/594 (38%), Positives = 342/594 (57%), Gaps = 14/594 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSAC 58
           MH  RT   G+L + +VG  V L GWV + R  GG++F+D+RD  GI Q+V +   D   
Sbjct: 7   MH--RTCYAGELRIENVGQQVTLMGWVQKKRNLGGLVFVDLRDRGGIAQLVFDIDVDKEA 64

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           FE  + + SE+V+ + G V  R ++  N N+ TG +E+  +++ +L+ ++  P+ V  + 
Sbjct: 65  FEKGEKLASEYVIAVRGKVCERQSK--NPNMATGDVEVFVEELRVLNESQTPPIYVKDDD 122

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E++R KYR+LDLR+  + KN++ R R+ N  R  +   NF E  TP L   +PEGAR
Sbjct: 123 DVAEALRLKYRYLDLRKPKMQKNLMLRHRVTNIARNYLSDNNFCEIETPFLVKPTPEGAR 182

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN+G FYALPQ+PQ YKQLLM SG DRYFQI  CFRDED R+DR P EF Q+D
Sbjct: 183 DYLVPSRVNEGRFYALPQSPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQP-EFTQID 241

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++  ME  L+ +F+E    +       R+ Y +A+ R+G+DKPD R  + 
Sbjct: 242 LEMSFVEENDVMTMMEGFLQKLFKEIKGIDI-DLPLPRLTYKEAMDRFGSDKPDTRYGLE 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
             N+++      F+VF+             +        R     + + A+     GLA+
Sbjct: 301 FVNISDVVADCGFKVFADSTKDGKSVRGINVKGGAEEFTRKAISHLEDHAKLYKAKGLAW 360

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  ++ E+G      P+AK  +    E+I+ ++  + GD   F+A             R 
Sbjct: 361 M--KITEAG---VTSPIAKFFSEEELESIKTKMGAELGDLLLFVADKDSVVYDALGQVRI 415

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSI 477
            +A +LG+ + N F   W+ +FP +E +EE  +    H+PFT P     + L+  D L +
Sbjct: 416 AVADKLGLADPNKFNLLWVTEFPIFEEDEENGRFAAKHHPFTSPMDEDLDHLEDEDKLKL 475

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+EI  G IR   S+V  + F  +G + E   N+FG L  AF+ G PPHG
Sbjct: 476 RAKAYDIVLNGYEIGGGSIRISDSQVQKRMFKALGFTDEEAYNKFGFLIDAFKFGTPPHG 535

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR+VMLL GA N+REV  FP +QN    +  +PS    +QL+EL +++
Sbjct: 536 GMAFGLDRLVMLLAGADNIREVIAFPKNQNAVCPMTMAPSIAEDDQLKELSIKV 589


>gi|238650679|ref|YP_002916532.1| aspartyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|238624777|gb|ACR47483.1| aspartyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 615

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 304/608 (50%), Positives = 414/608 (68%), Gaps = 13/608 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           MH+YRTH+C +L +SDV + V+LSGWVHR R HG ++F+D+RDHYGITQ+V  + +    
Sbjct: 11  MHKYRTHNCNELQISDVETEVKLSGWVHRRRDHGNLVFIDLRDHYGITQIVFTDQNPQLM 70

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E V+ + G V++RS +TIN  + TG +E+ A +  + S A+ LP  +  E++
Sbjct: 71  EDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVINTEKD 130

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R K+RFLDLRR+ LH NI+ R++II+ +R  M A  F E  TPILTASSPEGARD
Sbjct: 131 APEESRLKHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEGARD 190

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 191 FLVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDV 250

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+D+ +T+E V+  +F +F++       F+ I Y++++ +YG+DKPDLRNPII+
Sbjct: 251 EMSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIII 310

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VTE F  S+F +F + +           P K      +F D+M E+A S+G  GL YI
Sbjct: 311 ADVTEIFRDSDFTIFRENIKKGSIVRAIPAP-KAAALPHSFFDKMIEFAISEGAGGLGYI 369

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +    S      GPV K L+    E+++    + +GD+ FF +    K    A   R  
Sbjct: 370 QF----SETGEAKGPVVKFLSPQQLESLKATASVSNGDAVFFASDKKEKAAKLAGKVRIR 425

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----GNDLL 475
           + +EL ++  +CF+FCWI DFPFYE NEE  KIDF+HNPF+MPQGG+++L+      +LL
Sbjct: 426 LGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEELL 485

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + A+QYD+VCNG E++SG IRNH  E+M +AFS  G S+E V+ RFGG+ RAF+ G PP
Sbjct: 486 ELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSIAGYSEEEVDKRFGGMIRAFKFGAPP 545

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL---RIV 592
           HGGIA GIDRIVMLL  A N+RE+  FP++Q   DLLM +PS V  + L+EL +   R++
Sbjct: 546 HGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAEDLLMNAPSYVEDKALKELSIISHRLL 605

Query: 593 ENPKKILK 600
           E  +K  K
Sbjct: 606 EKMQKKNK 613


>gi|223984105|ref|ZP_03634257.1| hypothetical protein HOLDEFILI_01549 [Holdemania filiformis DSM
           12042]
 gi|223963899|gb|EEF68259.1| hypothetical protein HOLDEFILI_01549 [Holdemania filiformis DSM
           12042]
          Length = 580

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 219/592 (36%), Positives = 339/592 (57%), Gaps = 13/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RTH+ G+L +++ G  V + GWV R R  G ++F+D+RD  GI  V    D    E  
Sbjct: 1   MKRTHNNGELRLANAGEHVTVVGWVARRRNLGALVFIDLRDRSGI--VQITVDEKLAEQV 58

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K VR+E++L ++G V+ R  +  N  + TG+IE+ A+ + I++ AE  P+ +  E +  E
Sbjct: 59  KDVRNEYILQVEGKVVERQDK--NPKMATGEIEIYAENVNIVNTAETTPMIIAEETDALE 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  +  N++ R ++    R  +    FIE  TPIL  S+PEGARD+LV
Sbjct: 117 DTRLKYRYLDLRRAPIQNNLILRHKVTMLTRNYLSDHGFIEVETPILCKSTPEGARDYLV 176

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+ +G F+ALPQ+PQ YKQLLM  G ++YFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 177 PSRIFKGKFFALPQSPQIYKQLLMVGGIEKYFQIARCFRDEDLRADRQP-EFTQIDIEMS 235

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++ +   +E +++ +F    N    +  F R+ Y++ + RYG+DKPD R  + + N+
Sbjct: 236 FVDEEQVWTVVEGLMKEIFRNLKNVELDA--FPRLTYNECMARYGSDKPDTRFDMEIQNL 293

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIFW 361
              F  +EF VF  +L    G     + A+     +R   D++ E+ +  G   LA++  
Sbjct: 294 NAVFKDTEFTVFKNVLEQPKGMVGAIVAAQAADQFSRKDIDKLQEFVKIYGAKALAWLKM 353

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E       G VAK L      A+   L ++D D  F IA       +     R  + 
Sbjct: 354 SQGE-----LSGSVAKVLKPEEKNALIETLGLKDNDLIFMIADKAKVAQTALGALRVKLG 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +I+ + + F W+ +FP +E++EEE++   AH+PFT P         +D  +  +  
Sbjct: 409 RQLNLIDESRYNFLWVTNFPMFEYSEEEQRYVAAHHPFTSPNLEDVDKLMSDPENCYSRA 468

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+ SG IR H   V  + F  +G+S E    +FG    AF+ G PPHGG+  
Sbjct: 469 YDLVLNGYELLSGSIRIHDQHVQEKVFEAIGMSMEEAREKFGFFIDAFRYGTPPHGGVGI 528

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G++R+VM+L G  N+R+V  FP + +  DL+  +P+TV  +QL+EL + + +
Sbjct: 529 GLERLVMILAGTDNIRDVVAFPKTASASDLMSEAPNTVDEKQLKELHIALEK 580


>gi|319940130|ref|ZP_08014484.1| aspartyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319810844|gb|EFW07171.1| aspartyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 584

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 232/598 (38%), Positives = 345/598 (57%), Gaps = 17/598 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  + L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVRSEHVGQKITLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPENVAKEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V SR+    N  + TG +EL  + + +L+ A+  P  +    E
Sbjct: 61  ETAESLRSEYVIEVTGKVESRT--QANDKLATGAVELHVEHLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  +  N+  R ++ +S+R  +    FI+  TP LT S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLANLKLRAKVTHSIRNYLDELEFIDVETPFLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTELVKGIDFKVFSEA----PAVKAIVVKNAADSYSRKDIDKLTEQAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  + T  +   L ++D D   F+A       +     R  
Sbjct: 353 KVTSGELN-----GPVAKFLKDL-TSDLTDALQLEDNDLVLFVADTLEVANAALGALRIR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+ELG+I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 FAKELGLIDESKFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQADTAHELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S+E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINHKDLQERMFKALGFSEEEATDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR VMLL G +N+REV  FP +    D +  +PS V  +QL EL L++  + +K
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSIVDAKQLEELSLQVETHEEK 584


>gi|189465657|ref|ZP_03014442.1| hypothetical protein BACINT_02017 [Bacteroides intestinalis DSM
           17393]
 gi|189433921|gb|EDV02906.1| hypothetical protein BACINT_02017 [Bacteroides intestinalis DSM
           17393]
          Length = 585

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 229/598 (38%), Positives = 340/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            +R+H+CG+L +SDV   V L+GWV R R  GG+ F+D+RD YGITQ+V N   D+A  E
Sbjct: 1   MFRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVDAALCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ I G V  R ++  NANI TG IE+   ++ +L+ A   P  +    + 
Sbjct: 61  NANRLGREFVIQITGTVNERFSK--NANIPTGDIEIIVSELNVLNAALTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR ++ +N+  R R+   +R  + ++ FIE  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRPSVRRNLELRHRMTIEVRRYLDSQGFIEVETPVLVGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDDI+N  E + + +F+E      +   F R+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQDDIINLFEGMTKYLFKEIRGVE-LEGQFQRMAWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAY 358
            + +      F VF     +                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDILKGHGFSVFDSAEYIGG-----ICAEGAAHYTRKQLDALTEFVKRPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADAR 417
              R++E G+V     V K       + ++     + GD    ++GD  +K      + R
Sbjct: 352 A--RIEEDGSVK--SSVDKFYTQEVLQQVKEAFGAKPGDLILILSGDDTMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+E+E ++   H+PFT P+    +L   D  ++
Sbjct: 408 LEMGSQLGLRDKNTFACLWVVDFPMFEWSEQENRLMAMHHPFTHPKDEDIALLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H  ++  + F  +G + E  E +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVINGVEVGGGSIRIHDPKLQAKMFEILGFTPEKAEEQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +P+ +   QL EL L +    
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLDELNLIVDIKE 585


>gi|313650638|gb|EFS15040.1| aspartyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|333003477|gb|EGK23020.1| aspartyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333018637|gb|EGK37931.1| aspartyl-tRNA synthetase [Shigella flexneri K-304]
          Length = 577

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 214/580 (36%), Positives = 321/580 (55%), Gaps = 7/580 (1%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGL 76
           G  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G 
Sbjct: 2   GQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGT 61

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR 
Sbjct: 62  VRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRP 119

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ
Sbjct: 120 EMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQ 179

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME +
Sbjct: 180 SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEAL 238

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+ 
Sbjct: 239 VRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAG 296

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
             +   G         G    R   D    + +  G  GLAYI       G      PVA
Sbjct: 297 PANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVA 356

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K LN    EAI  R   QDGD  FF A +              + ++LG+ + + +   W
Sbjct: 357 KFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGKDLGLTDESKWAPLW 416

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           ++DFP +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +
Sbjct: 417 VIDFPMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSV 475

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+
Sbjct: 476 RIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNI 535

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           R+V  FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 RDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 575


>gi|222153888|ref|YP_002563065.1| aspartyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|254781755|sp|B9DW80|SYD_STRU0 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|222114701|emb|CAR43801.1| aspartyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 582

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 231/595 (38%), Positives = 350/595 (58%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+       
Sbjct: 1   MKRSMYAGHVRSEHIGQELTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEDVAKDVM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           EIA+S+RSE+V+ + G+V  R     N  I TG +EL  ++I +L+ ++  P  +    E
Sbjct: 61  EIAESLRSEYVIEVTGIVEERQ--QANNQIATGAVELKVEQITVLNTSKTTPFEIKDGVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +   NFI+  TP+LT S+PEGARD
Sbjct: 119 VSDETRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLNFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+++G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRISEGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V +E    + VS  F R+ YD A+ +YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDIVEGMIAKVMKETKGID-VSLPFPRMSYDLAMNQYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V+E     +F+VFS+     P  +   +       +R   D+M E+A+  G  GLA+I
Sbjct: 297 QDVSELVKGIDFKVFSQA----PVVKAIVVKGNADRYSRKDIDKMTEFAKQFGAKGLAWI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                + G +   GPV+K L  +    +   L + D D   F+A +     +     RN 
Sbjct: 353 KV---DDGKLT--GPVSKFLTEIE-SLLTDALQLVDNDLVLFVADELDIANATLGALRNR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL +++A
Sbjct: 407 IAKELQLIDESAFNFLWVIDWPMFEWSEEEGRYMSAHHPFTLPTEASAHELEGDLANVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G ++E  + +FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQRDLQERMFKALGFTEEEAKEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L+I  +
Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEKQLEELSLQIESH 581


>gi|184201002|ref|YP_001855209.1| aspartyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183581232|dbj|BAG29703.1| aspartyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 604

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 222/615 (36%), Positives = 330/615 (53%), Gaps = 29/615 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH  RTH  G L   ++G  V L+GWV R R HGG+ F+D+RD  G+ Q+V   +    E
Sbjct: 1   MHVLRTHELGALSAENIGETVTLAGWVGRRRDHGGVAFVDLRDASGVAQIVVRDE----E 56

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +R+E+VL + G V  R     N N+ +G++E+   ++ +L+ A  LP  +    E 
Sbjct: 57  QFHQLRNEYVLQVTGTVERRPEGNENPNLPSGEVEVMVDELTVLNTAAPLPFQIDEHVEV 116

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR    + +  R+ +    R  +  + F E  TP LT S+PEGARDF
Sbjct: 117 GEEARLKYRYLDLRRPEPARIMRLRSEVNRVARTLLHEQGFTEVETPTLTRSTPEGARDF 176

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLL   G ++YFQIA C+RDED R+DR P EF QLD+E
Sbjct: 177 LVPARLAPGSWYALPQSPQLFKQLLQVGGIEKYFQIARCYRDEDFRADRQP-EFTQLDVE 235

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SFVE+DD++   E +++ ++        ++    R+ Y  A+  YG+DKPDLR  + + 
Sbjct: 236 ASFVEEDDVIALGEQIVKALWALIG--VDITTPIPRMTYAQAMADYGSDKPDLRFDLKLT 293

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +TE+F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+ 
Sbjct: 294 ELTEYFKDTPFRVFQAP------YVGAVVMPGGASQPRRQLDAWQEWAKQRGAKGLAYVL 347

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           ++ D        GPVAK+++      +   +  + GD  FF AG      +    AR  I
Sbjct: 348 FKEDG----EIAGPVAKNISEAEKAGLAEAVGAKPGDCVFFAAGAVKTSRALLGAARVEI 403

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLK 470
              +G+I+ N + F W++D P +E   +                 H+ FT P+       
Sbjct: 404 GHRVGLIDENDWAFVWVVDAPLFEPASDAVESGDVAVGSGAWTAVHHAFTSPKPEFMDTF 463

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  S  A+ YD+VCNG EI  G IR H  +V  + F  +G+S+E    +FG L  AFQ
Sbjct: 464 DTDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQDRVFRVMGLSEEDAREKFGFLLDAFQ 523

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DR+V LL G +++R+V  FP + N  D L  +P+ ++ +Q ++ G  
Sbjct: 524 FGAPPHGGIAFGWDRVVALLAGTESIRDVIAFPKTGNGYDPLTAAPAPITAQQRKDAG-- 581

Query: 591 IVENPKKILKISVTT 605
           +   P+   + +  +
Sbjct: 582 VDAKPESRTQAAAAS 596


>gi|289167031|ref|YP_003445298.1| aspartyl-tRNA synthetase (aspartate-tRNA ligase) [Streptococcus
           mitis B6]
 gi|288906596|emb|CBJ21429.1| aspartyl-tRNA synthetase (aspartate-tRNA ligase) [Streptococcus
           mitis B6]
          Length = 587

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 234/596 (39%), Positives = 349/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            N+TE     +F+VFS++    P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QNLTEVVKCVDFKVFSEV----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTSIQAE-LTAALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETTHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|315225114|ref|ZP_07866931.1| aspartate--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314944797|gb|EFS96829.1| aspartate--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 584

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 222/597 (37%), Positives = 335/597 (56%), Gaps = 19/597 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACF 59
            YRTH+CG+L +S     V LSGWV R+R  G +I++D+RD YGITQ++ +    D   F
Sbjct: 1   MYRTHTCGELRLSHEKQQVTLSGWVQRIRNKGFMIWVDLRDRYGITQLIFDEERTDKTVF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E AK++  E V+ I G V+ R A   NANI TG++E+    + +L+ +E  P  +    +
Sbjct: 61  EQAKTLSREDVIQIQGTVIKREAA--NANIPTGEVEILVTALTLLNHSELPPFTIEDNTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR  +  N++ R ++   +R  +  + FIE  TP+L  S+PEGARD
Sbjct: 119 GGEDLRMKYRYLDIRRTPVRDNLIFRHKVSIMVRNYLSEQGFIEVETPVLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNAGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVEQ+DI+ T E + + + +E          F R+ Y +A++ YG DKPD+R  +  
Sbjct: 238 EMSFVEQEDIIQTFEGLAKHLLKELKGLEF--GTFPRMTYAEAMKTYGNDKPDIRFGMKF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             + +   H +F++F++   V                 R   D + EW +    G  G+ 
Sbjct: 296 GELNDLAQHRDFKIFNEAELVVG-----IAVPGANSYTRKEIDALVEWVKRPQVGASGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+    D     +    V K  N  + +A   R   + GD    ++G   K     +  R
Sbjct: 351 YVKCNEDG----SFKSSVDKFYNEDDLKAWAERTGAKAGDLICILSGKANKVRGQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ LG+   + +   W++DFP  EW+EEE++    H+PFT P+     L   D  ++
Sbjct: 407 MELAERLGLRKPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDTDPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG E+  G IR    E+  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 467 RANAYDLVLNGNEVGGGSIRIFNQELQAKMFQLLGFTPEQAQAQFGFLMNAFKYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G DR+V LL G + +R+   FP + +  D+++ +PS +   QL+EL +++  N
Sbjct: 527 GLAFGFDRLVALLGGQETIRDFIAFPKNNSGRDVMIDAPSPIDEAQLKELNIQLTIN 583


>gi|225026139|ref|ZP_03715331.1| hypothetical protein EUBHAL_00380 [Eubacterium hallii DSM 3353]
 gi|224956544|gb|EEG37753.1| hypothetical protein EUBHAL_00380 [Eubacterium hallii DSM 3353]
          Length = 597

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 230/597 (38%), Positives = 343/597 (57%), Gaps = 11/597 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
            R+H C ++   ++G  V L GWV + R  G +IF+D+RD  G+ Q+  + +      F+
Sbjct: 9   KRSHRCTEVSNENIGETVTLMGWVQKRRNLGSLIFVDLRDRSGLIQLYFDEETIGEEGFK 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A S+R+E+V+ + G V  RS   +N N+ TG IE+    I ILS +E  P P+  +   
Sbjct: 69  KAASLRAEFVIAVTGTVEKRSG-AVNENLETGDIEVKVDSIRILSESETPPFPIDADITV 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYRFLDLRR  + KN++ R+++    R  +  E F+E  TP+LT S+PEGARD+
Sbjct: 128 KDELRLKYRFLDLRRPNIQKNLMMRSKVATLTRQFLANEGFLEIETPMLTRSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQ+A CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQLARCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E +L  +F+   N   VS    R+ + DA+  YG+DKPDLR  + + 
Sbjct: 247 LSFVDVDDVIDVNERLLAYLFKLCLNEE-VSLPIQRMTWQDAMDYYGSDKPDLRFDMKIQ 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E      F VF+  +              G   ++     + + A+  G  GLAYI 
Sbjct: 306 DVSELVKDCGFGVFTGAIENGGMVRGLCAKGLGDVSSKK-MKHIEKTAKDYGAKGLAYIQ 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D  G V    P +K ++    +A+   +  + GD   F A      C      R   
Sbjct: 365 LKSD--GTVKC--PFSKFMSEEELQALIQAMGGETGDLLVFAADKFKVVCDVLGALRLKF 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +++ + + F WI +FP  EW+EEE +    H+PFTMP      +   +   ++A 
Sbjct: 421 AEELNLLDKSEYRFVWITEFPLLEWSEEENRYTAMHHPFTMPMEEDLDMIDTEPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H +++  + F  +GISKE  + +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTEIGGGSVRIHQNDIQEKMFECLGISKEQAQEKFGFLLEAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML+     +R+V  FP  ++   LL  +P+TV  +QL EL L I    K+
Sbjct: 541 YGLDRLVMLMTKEDTIRDVIAFPKVKDASCLLTDAPNTVDDKQLEELCLEIEIPEKE 597


>gi|325686765|gb|EGD28791.1| aspartate--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 584

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 230/597 (38%), Positives = 344/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVRKEHVGQEVILKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEYVIEVTGKVAAR--EQANDKLATGSVELHVENLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD
Sbjct: 119 VNDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E      VS  F R+ YDDA+  YG DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGIE-VSLPFPRMKYDDAMALYGVDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTELVKGVDFKVFSEA----PAVKSIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G +   GPVAK L  + T  +   L +++ D   F+A       +     R  
Sbjct: 353 KV---ADGELT--GPVAKFLTDL-TSQLTEALQLENNDLILFVADTLEVANAALGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LAKELDLIDQDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++  + +
Sbjct: 527 ALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQVEAHEE 583


>gi|193212990|ref|YP_001998943.1| aspartyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|238692646|sp|B3QP90|SYD_CHLP8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|193086467|gb|ACF11743.1| aspartyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 603

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 288/598 (48%), Positives = 393/598 (65%), Gaps = 8/598 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFE 60
           +R+RTH CG L     G+ V+L GWVHR+R HGG+IF+D+RDH GI Q+V  P+S   F 
Sbjct: 13  NRFRTHYCGLLNRDSEGAGVKLGGWVHRIRDHGGLIFIDLRDHTGICQLVIQPESGELFR 72

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA+ + SE V+  +G V+ RS ET+N  + +G IE+    I+I S A  LP PV      
Sbjct: 73  IAEGLHSESVISAEGSVVLRSDETVNPRLASGAIEVVVSAIKIESAAHPLPFPVADYMPT 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR+ LH+NI+ R+++  ++R  +   +FIE  TPILT+SSPEGARDF
Sbjct: 133 SEELRLKYRFLDLRRERLHENIIFRSQLTAAVRKYLTDLDFIEIQTPILTSSSPEGARDF 192

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQ+D+E
Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQVDIE 252

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD+   +E + + + E  +        F RI Y D + RYG+DKPDLR PI + 
Sbjct: 253 MSFVEQDDLFVILEGMFKHLVETMTTKRIAQYPFPRISYKDVMNRYGSDKPDLRIPIEIQ 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VTE FV+S F+VF+         +   +   G   +R F D+  + AR  G  GLAYI 
Sbjct: 313 DVTELFVNSGFKVFASNTKEGCCVKAMVLKGMGNE-SRLFYDKAEKRARELGSAGLAYIQ 371

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           ++       A  GPV K L      A++ +L ++ GD  FF AG   + C      RN+ 
Sbjct: 372 FK-----EEAPKGPVVKFLKEEEMAALKEQLGIETGDVVFFGAGKWEQTCKIMGGMRNYF 426

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A    + + +   FCWI+DFP +E+NEE+KKIDF+HNPF+MPQG ME+L+ +  L I A+
Sbjct: 427 ADVFPL-DRDELSFCWIVDFPMFEYNEEDKKIDFSHNPFSMPQGEMEALEQHSPLDILAY 485

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  ++M +AF   G   + V+ RFG +  AF+ G PPHGGIA
Sbjct: 486 QYDIVCNGIELSSGAIRNHRPDIMYKAFEIAGYPHDEVDARFGHMIEAFKHGAPPHGGIA 545

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
            G+DR+VM+L   +N+REV  FPM+Q+  DL+M +PS V+ +QL+EL +++    ++ 
Sbjct: 546 PGLDRLVMILRDEQNIREVIAFPMNQSAQDLMMAAPSEVTAQQLKELHIKVELPEEEA 603


>gi|182420378|ref|ZP_02951600.1| aspartyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237667017|ref|ZP_04527001.1| aspartate--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182375744|gb|EDT73342.1| aspartyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655365|gb|EEP52921.1| aspartate--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 599

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 223/597 (37%), Positives = 342/597 (57%), Gaps = 13/597 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG+     VG  + L GWV R R  GG+ F+D+RD  GI QVV     ++  FEI
Sbjct: 9   KRTMMCGEPREEHVGKKITLMGWVQRNRKLGGLEFIDLRDKSGIMQVVFGEEINAEAFEI 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK VR E+ + + G V+ R  E++N N+ TG +EL  + I++LS +E  P+ +    +  
Sbjct: 69  AKGVRPEYCIAVTGEVVKR--ESVNENMPTGFVELKCESIKVLSESETPPIIIKENLDTA 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR KYR+LDLRR  + +    R++   ++R  +   NF++  TP+L  S+PEGARD+L
Sbjct: 127 EDIRLKYRYLDLRRPDMQRIFDIRSKTTKAIRDYLEEHNFLDVETPVLGKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQ+PQ YKQLLM SGFDRY+QIA CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYPGMFYALPQSPQIYKQLLMMSGFDRYYQIAKCFRDEDLRANRQP-EFTQVDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DI+   E ++  VF++ +  + V     R+ + +A+ +YG+DKPDLR  + + +
Sbjct: 246 SFVEQEDIMELNEGLIAHVFKKVAGVD-VQLPIKRMTFKEAMEKYGSDKPDLRFGMEITD 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F VF   +          +   G    R   D++ E+ ++    GLA+I  
Sbjct: 305 ITEDVKDMDFVVFKSAIEAGGSVRALCLK-GGASLGRKPLDKLGEFVKTYKAKGLAWIQL 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +  E         +AK L    T+AI   ++ ++GD+   +A             R  +A
Sbjct: 364 KEGE-----VKSSIAKFLTDDVTKAIVNTMNAEEGDAILIVADKNSVVFPSLGALRLQLA 418

Query: 422 QELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           ++  +I + N F F W+ +FPF+E++EEE++    H+PFT P         +D   +++ 
Sbjct: 419 KDFDLIKDKNEFNFTWVTEFPFFEYSEEEERFKACHHPFTAPMDEDLEFVESDPGRVRSK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H + +  +    +G ++E     FG L +A + G PPHGG+A
Sbjct: 479 AYDLVLNGEELGGGSIRIHDTAIQERMLRALGFTEERAWESFGFLLQALKFGAPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR++M L G +N+++V  FP +QN    L  +P+ V  +QL +LG+ I    ++
Sbjct: 539 FGLDRMIMFLAGTENIKDVIAFPKNQNAYCYLSEAPNIVDEKQLNDLGISINVKEEQ 595


>gi|261879647|ref|ZP_06006074.1| aspartate-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270333664|gb|EFA44450.1| aspartate-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 585

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 220/595 (36%), Positives = 338/595 (56%), Gaps = 20/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT++CG+L ++D G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   D +  +
Sbjct: 1   MYRTNTCGELRLTDAGKEVTLAGWVQRTRKMGGMTFVDLRDRYGITQIVFNEADDQSLCD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + + G V  R ++  N  + TG IE+ AQ++ +LS +   P  +    + 
Sbjct: 61  RANKLGREYCVQVKGAVCERQSK--NPKMDTGDIEVVAQELTVLSSSLTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR+ + KN+  R R+   +R  +    F+E  TPIL  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRREAVRKNLELRHRMTILIRNFLDKHQFMEVETPILIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM  GFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVGGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD+++  E + R +F+E            ++ + +A++RYG+DKPDLR  +   
Sbjct: 238 MSFVDQDDVIDLFEEMARHLFKEIRGVELPKL--EQMTWHEAMKRYGSDKPDLRFGMEFV 295

Query: 301 NVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + + F    +F VF++   +                +R   + + ++ +    G  GL 
Sbjct: 296 ELKDAFAGKGDFSVFNEAAYIGG-----ICVPGCADYSRKQLNELTDFVKRPQVGAKGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           YI +  D     +    V K  +      I+ +   +DGD    ++GD   K        
Sbjct: 351 YIKFMADG----SVKSSVDKFYSPEVLAEIKEKTGAKDGDLVLILSGDNANKTRIQLCSL 406

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP     SL       
Sbjct: 407 RLEMGNRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDISLLDEHPEQ 466

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G IR H +++  + F  +G + E  E +FG L  AF+ G PPH
Sbjct: 467 VRAKAYDFVCNGIEVGGGSIRIHDTQLQEKMFEVLGFTPESAEAQFGFLMNAFKYGAPPH 526

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR V ++ G  ++R+   FP + +  D+++ +PS +  +QL EL +++
Sbjct: 527 AGLAFGLDRFVSIMAGLDSIRDCMAFPKNNSGRDVMLDAPSRIDDKQLDELQIKL 581


>gi|54025619|ref|YP_119861.1| aspartyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|62287534|sp|Q5YTJ4|SYD_NOCFA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|54017127|dbj|BAD58497.1| putative aspartyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 597

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 231/608 (37%), Positives = 337/608 (55%), Gaps = 26/608 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+IF+D+RD  G++Q V   +    E A  
Sbjct: 3   RTHLAGSLRSEHAGQTVTLTGWVARRRDHGGVIFIDLRDASGVSQAVF-REGEAAEQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R     N  + TGQIE++ +++E+L+ +    LP   + +  E  
Sbjct: 62  LRAEYCVRVTGVVEQRPDGNENPELPTGQIEVNVRELEVLNESAP--LPFQLDEQPGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R K+R+LDLRR+     I  R+++  + R  +    F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLKHRYLDLRREGPAHAIRLRSKVNAAAREVLARHEFVEVETPTLTKSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G+FYALPQ+PQ +KQLLM  G +RYFQIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 180 RLQPGNFYALPQSPQLFKQLLMVGGIERYFQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQ D++   E +L  +++       +      + Y +A+RR+G+DKPDLR  + +   TE
Sbjct: 239 EQADVILLAEEILVALWKLIG--YEIPTPIPHMTYAEAMRRFGSDKPDLRFGVEITECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F ++ FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   ++
Sbjct: 297 YFKNTPFRVFQAP------YVGAVVMPGGASQPRRQLDAWQEWAKQRGAKGLAYVL--VN 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G++   GPVAK+L+    E +   +  + GD  FF AG      +    AR  IA+++
Sbjct: 349 EDGSLG--GPVAKNLSDAEREGLAKHVGAEPGDCVFFAAGPAKAQRALLGAARGEIARKV 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGMESLKGNDL 474
           G+I+ N + F WI+D P +E  ++                 H+ FT P+         D 
Sbjct: 407 GLIDENAWSFVWIVDAPLFEPADDATASGDVALGHSAWTAVHHAFTSPKPESLDTFDTDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD+VCNG EI  G IR H  +V  + F  +GI ++  + +FG L  AF  G P
Sbjct: 467 GSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGIGEQEAQEKFGFLLDAFAYGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRIV LL G  ++REV  FP +    D L  +P+ ++ +Q +E GL     
Sbjct: 527 PHGGIAFGWDRIVALLAGLDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKEAGLDAKPE 586

Query: 595 PKKILKIS 602
             ++ K  
Sbjct: 587 QAEVKKAE 594


>gi|314987970|gb|EFT32061.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314989780|gb|EFT33871.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
          Length = 606

 Score =  607 bits (1564), Expect = e-171,   Method: Composition-based stats.
 Identities = 230/603 (38%), Positives = 331/603 (54%), Gaps = 25/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++       +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKIIG--VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF         Y    +   G    R   D   EWAR++G  GLAYI     
Sbjct: 300 FFANTAFRVFQAP------YVGAVVMPGGASLPRRQFDAWQEWARTRGAKGLAYITI--- 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            S      GPVAK+++      I  ++  + GD+ FF AG           AR  I +  
Sbjct: 351 -SDEGVPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P ++  +E                 H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GIS E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGISPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G  +   
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587

Query: 595 PKK 597
           PKK
Sbjct: 588 PKK 590


>gi|326560762|gb|EGE11129.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326566601|gb|EGE16744.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
 gi|326569626|gb|EGE19678.1| aspartyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326570845|gb|EGE20869.1| aspartyl-tRNA synthetase [Moraxella catarrhalis BC7]
 gi|326574392|gb|EGE24334.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
 gi|326576426|gb|EGE26335.1| aspartyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 597

 Score =  606 bits (1563), Expect = e-171,   Method: Composition-based stats.
 Identities = 228/600 (38%), Positives = 340/600 (56%), Gaps = 14/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +   + ++GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 2   RSTYCGQVTEELIDQTITIAGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPE 122
           + RSE++L I G V  R   T N N+++GQ+EL  ++IE+L+ ++  P P         E
Sbjct: 62  AARSEYLLKITGRVRRRYEGTENPNMVSGQVELLGKEIELLAKSDTPPFPLNDDNITVSE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLD+RR  + + +  R +  +++R  +    F++  TP+LT ++PEGARD+LV
Sbjct: 122 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  QG+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 182 PSRTRQGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I++  E + + +F+   +    +  F R+ Y DA+R Y +DKPDLR P+ + +V
Sbjct: 241 FLSDEEIMDITEGLTKNLFKTMLDVEFDT--FPRMTYADAMRDYASDKPDLRIPLKLIDV 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +   H EF+VFS       G  V      GG  +R   D   ++    G  GLAYI   
Sbjct: 299 ADIMQHVEFKVFSGPAQDPKGRVVALRIPNGGNMSRKQIDEYTKFVGIYGARGLAYIKVN 358

Query: 363 LDES------GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
              +             P+ K++       +  R D Q GD  FF A             
Sbjct: 359 DASNINNGVEKESGLQSPIIKNMTDEVLIELIERTDAQTGDIIFFGADKAKIVNDAMGAL 418

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  I  +L +  C  +   W++DFP +E  ++  K    H+PFT P+G +E LK +   +
Sbjct: 419 RVKIGTDLNLFTCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTRPKGSVEELKQS-PET 475

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  YD+V NG EI  G +R +  ++    F  +GISKE  E +F  L  A + G PPH
Sbjct: 476 ALSIAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKEEAELKFKFLMDALRFGAPPH 535

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V   QLRELG+RI E  K
Sbjct: 536 GGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTEAPAEVDNRQLRELGIRIREKQK 595


>gi|332883986|gb|EGK04266.1| aspartyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 584

 Score =  606 bits (1563), Expect = e-171,   Method: Composition-based stats.
 Identities = 222/599 (37%), Positives = 333/599 (55%), Gaps = 21/599 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSAC--F 59
            YR H+CG+L ++DV   V L+GWV+ VR  GG + F+D+RD YGITQ+  + D     +
Sbjct: 1   MYRNHTCGELTLADVNKEVTLAGWVNAVRKLGGGVTFIDLRDRYGITQLSFSKDINADLY 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +  E+VL + G V  RS++  N N  TG IE+   ++ IL+ ++  P  +    +
Sbjct: 61  ERANKIGREYVLQVTGNVEERSSK--NPNRSTGDIEIIVNELVILNTSDTPPFTIEDNTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + +R KYR+LDLRRD + KN+  R +I    R  +    F+E  TP+L  S+PEGARD
Sbjct: 119 GGDDLRMKYRYLDLRRDVVRKNLELRHKIAFETRRYLDERQFLEVETPVLIGSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNPGEFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMS+V Q+D+LN  E + + +F+     +     F R+ Y  A++ YG+DKPD R  +  
Sbjct: 238 EMSYVNQEDVLNMFEGLTKHLFKVVKGIDIPD--FPRMTYAHAMKYYGSDKPDTRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWAR--SQGQPGL 356
             + +     +F VF     V       AI AKG     R   D + ++ +    G  GL
Sbjct: 296 VEIKDLTEGKDFVVFDSSEYVG------AICAKGAASYTRKQIDALTDYVKRPQIGAKGL 349

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            Y  +  D     +    V K  N  + +    R   + GD    I G+  K      + 
Sbjct: 350 VYARYEADG----SLKSSVDKFYNPEDLKKWAERCQAEPGDLILIICGETEKAQKQLGEL 405

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +A++LG+ + N F   W++DFP  E +EE  +    H+PFT P+    +L  +D   
Sbjct: 406 RLEVAEQLGLRDKNQFNCLWVIDFPLLEKDEELGRYFAKHHPFTSPKEEDIALLDSDPGV 465

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD+V NG E+  G +R   S++  + F  +G ++E  + +FG L  AF+ G PPH
Sbjct: 466 VRANAYDMVINGVEVGGGSVRIFNSQLQNKMFQILGFTEEKAQAQFGFLMNAFKYGAPPH 525

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+A G+DR+V L  G  ++R+   FP + +  D+++ +P+T+   QL EL L++    
Sbjct: 526 AGLAFGLDRLVSLFAGLDSIRDCIAFPKNNSGRDMMIDAPATLDPAQLEELNLKVEIKE 584


>gi|306834555|ref|ZP_07467668.1| aspartate--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|296777685|gb|ADH43102.1| aspartyl-rRNA synthetase [uncultured bacterium MID12]
 gi|304423357|gb|EFM26510.1| aspartate--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 582

 Score =  606 bits (1563), Expect = e-171,   Method: Composition-based stats.
 Identities = 229/595 (38%), Positives = 343/595 (57%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             RT   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    ++ 
Sbjct: 1   MKRTMYAGRVRSEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSSDVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+R+E+V+ + G V  R  E  N N+ TG +EL    + +L+ A+  P  +  + E
Sbjct: 61  TTAESLRNEFVIEVTGEVAQR--EQENKNLPTGAVELKVSALTVLNTAKTTPFEIKDDVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  +  N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDENRLRYRYLDLRRPKMLNNFKLRAKVTHSIRNYLDELEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+DM
Sbjct: 179 YLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDM 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   DI +  E ++  V ++    + V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSDQDIQDITEGMIAKVMKDTKGID-VTLPFPRMSYDDAMNNYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTEVVKDVDFKVFSQA----PVVKAIVVKGNADKYSRKNIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +           GPVAK L  +  + + V L +++ D   F+A       +     R  
Sbjct: 353 KFTDGA-----ITGPVAKFLTSIE-DKLTVSLQLEENDLVLFVADTLEVANNTLGALRTR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +++ + F F W++D+P +EW+EEE++   AH+PFT+P          DL  ++A
Sbjct: 407 IAKELDMVDNSKFNFLWVVDWPMFEWSEEEERYMSAHHPFTLPTEESAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E+  + F  +G + E   ++FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKELQERMFKALGFTAEEANDQFGFLLEAMNYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL L I  N
Sbjct: 527 AIGLDRFVMLLAGEDNIREVIAFPKNNKAADPMTQAPSLVADKQLDELALAIETN 581


>gi|332533784|ref|ZP_08409640.1| aspartyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332036715|gb|EGI73178.1| aspartyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 592

 Score =  606 bits (1563), Expect = e-171,   Method: Composition-based stats.
 Identities = 210/592 (35%), Positives = 327/592 (55%), Gaps = 7/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CG L  + V   V L GW+++ R  GG+IF+D+RD  G+ QVV + D       A 
Sbjct: 2   RSIYCGQLNKTHVDQEVELCGWINKRRDLGGLIFVDLRDREGLVQVVFDSDIEELMSSAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R E+ + + G V +R    +N ++ TG+IE+   ++ I++ +E   LP+   +   E 
Sbjct: 62  TLRQEFCVQLKGTVRARPDSQVNKDMATGEIEVLGTELTIINRSEP--LPLDFNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 RRLKYRYLDLRRLEMSDRIKLRAKASSFVRRFLDENGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D +    E ++R +++   N +    +F  + Y +A+  YG+DKPDLRNP+ + +V 
Sbjct: 239 MSSDQVRGMTEKMIREMWQTLLNVD--LGDFPIMPYSEAMSLYGSDKPDLRNPMKLVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VFS   +   G         G   +R   D   ++    G  G+A++    
Sbjct: 297 DLVKDVEFNVFSGPANDEKGRVAVLTVPGGAKLSRKQLDDYTKFIGIYGAKGMAWMKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L+      +  R + Q GD   F A             R  I  +
Sbjct: 357 HTAGAEGVQSPVAKFLSEDVITKLLERTNAQSGDIILFGADKRNTVNEAMGALRVKIGVD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I N + +   W++DFP +E + +E  +   H+PFT P+    S    +  +  +  YD
Sbjct: 417 LEITNLDSWAPLWVVDFPMFEED-DEGTLHAVHHPFTAPKDITASELEANPAAAISDAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +++   AF  +GI+++  +++FG L  A + G PPH G+A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNADMQETAFRILGINEQEQQDKFGFLLDALKYGTPPHAGLAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+ MLL G  N+R+V  FP +     LL  +PS  +++ L EL + +VE  
Sbjct: 536 DRLAMLLCGTDNIRDVIAFPKTTQASCLLTNAPSKPNMDSLAELAISVVEKA 587


>gi|169824555|ref|YP_001692166.1| aspartyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831360|dbj|BAG08276.1| aspartyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 588

 Score =  606 bits (1563), Expect = e-171,   Method: Composition-based stats.
 Identities = 231/588 (39%), Positives = 346/588 (58%), Gaps = 10/588 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG+L +SDV   V L GWV + R  G +IF+D+RD+ GITQ+    D    F+ AK
Sbjct: 9   RTHMCGELRLSDVNKEVILMGWVQKERNLGSLIFIDLRDNTGITQIAIKDDNKEIFDKAK 68

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V+SE+VLC+ G V  R  E+ N NI TG+IE+ A ++ +L  A   P+ +  +    E+
Sbjct: 69  DVKSEYVLCVKGDVRER--ESKNNNIPTGEIEVIANELIVLDTANVPPIYIKDDDNAQEA 126

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLR+  L  N+  R +    +R  +    F E  TP+L   +PEGARD+LV 
Sbjct: 127 VRLKYRYLDLRKPKLQNNLKLRAKTNKLIREYLDENGFYEIETPVLGKPTPEGARDYLVA 186

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN+  FYALPQ+PQ  KQLLM SG DRY+QI  CFRDED R++R P EF Q+DMEMSF
Sbjct: 187 SRVNEHRFYALPQSPQLMKQLLMISGMDRYYQIVKCFRDEDLRANRQP-EFTQVDMEMSF 245

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+Q+D++   E +++ +F+E    +       R+ Y +A+ RYG DKPDLR    + N+T
Sbjct: 246 VDQEDVMTINEGLIKKLFKEIRGIDI-PTPIKRMTYSEAMERYGCDKPDLRFGFELKNIT 304

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E    SEF+VFS     N       I       +R   D++ ++ +  G  GL++I    
Sbjct: 305 ELVKDSEFKVFSSCNEKNKSVRCINIGNYESEYSRKKIDKLEKFVKEYGAKGLSWIRVHD 364

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E         + K L+     +I       +    F +A       +  +  RN IA++
Sbjct: 365 GE-----IQSSIKKFLSDEELNSIIESTKEDENALIFILADKNDVVFNGLSALRNRIARD 419

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           + +++ + FEF WI+DFP +E++EEE +    H+PFTMP+         D   ++A  YD
Sbjct: 420 MNLVDNDTFEFVWIVDFPLFEYDEEENRFVAMHHPFTMPKEEDIQYLLTDKEKVRAKAYD 479

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +VCNG EI  G IR + S++  + F  + +++E++EN+FG    AF  G PPHGG+A G+
Sbjct: 480 IVCNGDEIGGGSIRINNSDLQKKMFEALELTEEMIENKFGFFVEAFNYGTPPHGGLAYGM 539

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           DR++MLL+G  N+++V  FP +Q+  DLL G+P+ V  +QL+E+ +++
Sbjct: 540 DRLMMLLVGTDNIKDVIAFPKTQSATDLLTGAPTNVDEKQLKEIHIKL 587


>gi|118602419|ref|YP_903634.1| aspartyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166225385|sp|A1AW56|SYD_RUTMC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|118567358|gb|ABL02163.1| aspartyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 583

 Score =  606 bits (1563), Expect = e-171,   Method: Composition-based stats.
 Identities = 221/592 (37%), Positives = 345/592 (58%), Gaps = 11/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH CG+L   ++G  V + GWV+R R HGG+IFLD+RD +GI QVV NPD+A F +A++
Sbjct: 2   RTHFCGELNKDNIGQTVEIYGWVNRRRDHGGVIFLDMRDKHGIAQVVINPDNADFSLAET 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E+VL I G +++R     N  + TG+IE+ AQ IEIL+ ++ +P       +  E +
Sbjct: 62  VRNEFVLKITGTIIARGEGLTNPKLSTGKIEIKAQNIEILNTSKPVPFQ-IDATDTSEEV 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLR DT+   +  R+R+   MR  M   +F++  TP LT ++PEGARD+LVPS
Sbjct: 121 RLRYRYLDLRSDTMQNRLRLRSRVTRYMREFMDEHDFLDIETPFLTKATPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R + G F+ALPQ+PQ +KQLLM SGF+RY+QI  CFRDED R+DR P EF QLD+E SF+
Sbjct: 181 RTHSGKFFALPQSPQLFKQLLMMSGFERYYQIVKCFRDEDLRADRQP-EFTQLDVETSFM 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +++I+  ME + RG+F+   N +   N F  I Y D++ +YG D+PD+R  + + ++ +
Sbjct: 240 SENEIMTMMEKMTRGLFKLVINVDLGDN-FPTITYADSMAKYGLDRPDMRISMQIVSIDK 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                +F+VFS   + +           G   +R   D+  ++    G  GLAYI    +
Sbjct: 299 IMQGVDFKVFSGPANYDDSRVAALKVPNGASISRKNIDKYTKYVSIYGAKGLAYIKLNKN 358

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
                    P+ K L       +    D + GD  FF A           + R  +A++L
Sbjct: 359 -----GPASPILKFLGDEVIAKVIEMTDAKTGDIIFFGADKSKIVNEALGNLREQLAKDL 413

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            + +   +   W++DFP +E  ++   ++  H+PFT P    ++L+     +  +  YDL
Sbjct: 414 DLFDT-QWAPIWVVDFPMFEVGDD-GSLNTTHHPFTAPSVDAKTLEKT-ATTALSKAYDL 470

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG E+  G IR H  ++       +GIS + ++++FG    A + G PPHGG+A G+D
Sbjct: 471 VINGSEVGGGSIRIHQIDMQKTVLKLLGISDQEIQDKFGFFLNALEYGCPPHGGMAFGLD 530

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           R++M++ GA ++R+V  FP +Q    LL  +P+++S + LREL ++I    K
Sbjct: 531 RLMMIMTGANSIRDVVAFPKTQTAACLLTDTPTSISRKLLRELSVKINLPEK 582


>gi|194336680|ref|YP_002018474.1| aspartyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|238693359|sp|B4SAH1|SYD_PELPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|194309157|gb|ACF43857.1| aspartyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 601

 Score =  606 bits (1563), Expect = e-171,   Method: Composition-based stats.
 Identities = 286/597 (47%), Positives = 391/597 (65%), Gaps = 9/597 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFE 60
           +R+R+  CG L        VRL+GWVHR R HGG+IF+D+RDH GI+Q+V  P+    F 
Sbjct: 13  NRFRSDYCGLLCPEREHGSVRLAGWVHRKRDHGGLIFIDLRDHTGISQLVIQPEQQELFA 72

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +  E V+CI+G+V+ R+   IN+ + +G+IE+   +I + S A  LP PV  E   
Sbjct: 73  KAEQLHVESVICIEGVVVLRAPGAINSRLASGEIEVVVSQITVESNAHPLPFPVADEVVT 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRF+DLRR+ +H+NI+ R+R+  ++R  +  ++FIE  TPILT+SSPEGARDF
Sbjct: 133 SEELRLKYRFIDLRREKIHENIIFRSRLTAAIRRYLEEQDFIEIQTPILTSSSPEGARDF 192

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQLDME 252

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQ+D+   +E ++  +    S+       F RI Y + + R+GTDKPDLR P+ + 
Sbjct: 253 MAFIEQNDLFTILEGMIEHLTRTMSHKRITQFPFPRISYKEVMNRFGTDKPDLRIPLEIS 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT  FV S F+VF+         +   +  +G   +R F D+  + A+  G  GLAYI 
Sbjct: 313 DVTPLFVGSAFKVFANSTVEGSCVKALVVKGRGNE-SRLFYDKAEKRAKELGSGGLAYIQ 371

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +R          GPV K L+  +   ++  L ++ GD  FF AG     C      R + 
Sbjct: 372 FR-----EEGPKGPVVKFLSEADLATLKEHLGLETGDVVFFGAGKWESTCKIMGGMRTYF 426

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +L  ++ +   FCWI+DFP YE+NEE KKIDF+HNPF+MPQG ME+L+    L I A+
Sbjct: 427 G-DLFTLDKDELSFCWIVDFPMYEYNEEAKKIDFSHNPFSMPQGEMEALETMPPLDILAY 485

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  E+M +AF   G S+E V+ RFG +  AF+ G PPHGGIA
Sbjct: 486 QYDIVCNGIELSSGAIRNHKPEIMYKAFGIAGYSREEVDARFGHMIEAFKLGAPPHGGIA 545

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VM+L   +N+REV  FPM+Q   DL+MGSPS V+  QL+EL L++ E PKK
Sbjct: 546 PGLDRLVMILCDEQNIREVIAFPMNQQAQDLMMGSPSEVTPVQLKELHLKV-ELPKK 601


>gi|67922351|ref|ZP_00515863.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Crocosphaera
           watsonii WH 8501]
 gi|67855802|gb|EAM51049.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Crocosphaera
           watsonii WH 8501]
          Length = 619

 Score =  606 bits (1563), Expect = e-171,   Method: Composition-based stats.
 Identities = 232/603 (38%), Positives = 347/603 (57%), Gaps = 17/603 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           + RTH C  +  +DV   V L GWV R R HGG+IF+D+RD  GI Q+V++P      + 
Sbjct: 21  QMRTHYCNHVSATDVEKTVTLFGWVDRRRDHGGVIFIDLRDRTGIVQIVSDPQRTPTSYP 80

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGE 117
           IA+++R+E+V+ I G V  R  E++N  I TG++E+ A+ IE+L+         +     
Sbjct: 81  IAETLRNEYVVKIIGQVSKRPPESLNTKITTGEVEIYAESIELLNGVNKQLPFVVSSLDA 140

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEG 176
               E  R KYR+LDLRRD + KN+  R  ++ ++R  +   + F+E  TPILT S+PEG
Sbjct: 141 EFVKEETRLKYRYLDLRRDRMAKNLQLRHTVVKAIRRYLEDEQQFMEIETPILTRSTPEG 200

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSRV+ G +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q
Sbjct: 201 ARDYLVPSRVHPGQWYALPQSPQLFKQLLMVSGCDRYYQIARCFRDEDLRADRQP-EFTQ 259

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEMSF+ +++IL   E ++  +F+   N + +   F R+ Y D++ +YG D+PD R  
Sbjct: 260 LDMEMSFMSENEILELNEGLVCSIFKTVKNID-LPRPFPRLTYKDSMEKYGNDRPDTRFD 318

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQ 353
           + + +V++    S F+VFS ++      +V  IP      +         + + A   G 
Sbjct: 319 LTLVDVSDIVKDSGFKVFSGVVKNGGKVKVLPIPGGNDAISNVQIKPGGDLFKEATEAGA 378

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            G+AYI  R+ E   +  +G +  +L       +  R+  + G    F AGD        
Sbjct: 379 KGIAYI--RVKEDNKLDTIGAIKDNLTEDKKAELLARIGAKPGYLLLFGAGDTDTVNKSL 436

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           +  R  I Q + +I+ +     WI +FP +EWN +EK+++  H+PFT P          D
Sbjct: 437 SRLRLVIGQRMNLIDPDKINLLWITEFPMFEWNADEKRLEALHHPFTAPNLADID----D 492

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           L + +A  YDLV NG EI  G +R +  ++  + F  +G+S E   N+FG L  AF+ G 
Sbjct: 493 LSTARAQAYDLVYNGVEIGGGSLRIYQKDIQEKVFETIGLSLEEAYNKFGFLLEAFEYGT 552

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR+VMLL    ++R+V  FP +Q    LL  +P++V  +QL+EL ++   
Sbjct: 553 PPHGGIAYGLDRLVMLLAKEDSIRDVIAFPKTQQASCLLTEAPASVDAKQLKELEIKSTY 612

Query: 594 NPK 596
            PK
Sbjct: 613 KPK 615


>gi|314966612|gb|EFT10711.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
          Length = 606

 Score =  606 bits (1563), Expect = e-171,   Method: Composition-based stats.
 Identities = 230/603 (38%), Positives = 330/603 (54%), Gaps = 25/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVNVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++       +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKIIG--VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF         Y    +   G    R   D   EWAR++G  GLAYI     
Sbjct: 300 FFANTAFRVFQAP------YVGAVVMPGGASLPRRQFDAWQEWARTRGAKGLAYITI--- 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            S   A  GPVAK+++      I  +   + GD+ FF AG           AR  I +  
Sbjct: 351 -SDEGAPEGPVAKNISEEEKAGIAEKAGAKPGDAIFFAAGSKTSCQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P ++  +E                 H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G  +   
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587

Query: 595 PKK 597
           PKK
Sbjct: 588 PKK 590


>gi|319789638|ref|YP_004151271.1| aspartyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114140|gb|ADU96630.1| aspartyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 596

 Score =  606 bits (1563), Expect = e-171,   Method: Composition-based stats.
 Identities = 224/595 (37%), Positives = 335/595 (56%), Gaps = 11/595 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTH CG++   D+G  V+++GWV   R HGG++F+D+RD  G  QVV +P+      E 
Sbjct: 9   KRTHYCGEISEKDLGKDVKVAGWVDTTRDHGGVVFIDLRDRTGKVQVVFSPEISKELVEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK +R E+V+ ++G V  R   T N  + TG  E+ A+K++IL+ +  LP P+    +  
Sbjct: 69  AKKLRHEYVVAVEGEVRRRPEGTENPKLKTGNYEIYAKKLQILNRSLPLPFPIEDNVKVS 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYRFLDLRR  + +N++ R R+   +R     E F+E  TP LT S+PEGARDFL
Sbjct: 129 EEVRLKYRFLDLRRPKMAENLLFRHRLYRVVREVFNEEGFVEVETPYLTKSTPEGARDFL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQ+LM +G DRY+QIA CFRDED R+DR P EF Q+D EM
Sbjct: 189 VPSRIYPGKFYALPQSPQLFKQILMVAGIDRYYQIARCFRDEDLRADRQP-EFTQIDFEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV + D++   E  +R  ++E             + YD+A+ R+GTD+PD R  + +  
Sbjct: 248 SFVAERDVMAVAEKFIRRAYKELLGIEIGE--IPVMTYDEAMSRFGTDRPDTRFGLELKE 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+      F+VF  +       +       G   +R   D + ++    G  GLA+I  
Sbjct: 306 ITDIAKQCNFKVFRSVAEKGGIVKALNFK-GGAKLSRKEIDELTKFVGVYGAKGLAWIKV 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D         P+ K         I  RL+ + GD  FF+A  P    +  A+ R  + 
Sbjct: 365 LPD-----GLQSPIVKFFTEGEMNEILKRLEAEVGDILFFVADKPEVVNAALANLRLKLG 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   +I+ +     W++DFP +EWNEEE++ +  H+PFT P+         +  +++A  
Sbjct: 420 KMANLIDESKVNILWVVDFPMFEWNEEEERWEALHHPFTSPKEEDIEKLLENPGAVRARA 479

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG EI  G IR H  +V  + F  +G+S+E  + RFG L  A + G PPHGG+A 
Sbjct: 480 YDMVLNGVEIGGGSIRIHREDVQEKVFKVIGLSEEEAKERFGFLLEALKYGAPPHGGMAF 539

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+  ++ G +++R+V  FP +Q    LL G+P TV  EQL EL + +    +
Sbjct: 540 GLDRLCAIMRGEESIRDVIAFPKTQRGQCLLTGAPDTVREEQLDELHIEVKTKEE 594


>gi|282880058|ref|ZP_06288779.1| aspartate--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281306072|gb|EFA98111.1| aspartate--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 586

 Score =  606 bits (1563), Expect = e-171,   Method: Composition-based stats.
 Identities = 222/595 (37%), Positives = 338/595 (56%), Gaps = 19/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT++CG+L +SDV   V LSGWV R R  GG+ F+D+RD YGITQ+V N   D+   E
Sbjct: 1   MYRTNTCGELRLSDVNKEVTLSGWVQRTRKMGGMTFVDLRDRYGITQLVFNEAADAKLCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + + G V  R ++  N  + TG IE+   ++ ILS +   P  +  E + 
Sbjct: 61  QANKLGREFCIQVKGTVSERQSK--NEKMPTGDIEILVSQLVILSESLTPPFKIEDETDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR T+ KN+  R R+   +R  +  E FIE  TP+L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRPTVRKNLELRHRMTILIRNFLDNEQFIEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++   EN+ R +F+E       +    ++ + +A++R+G+DKPDLR  +   
Sbjct: 238 MSFVDQEDVIGLFENLCRHLFKEIRGVELPAKL-QQMTWAEAMKRFGSDKPDLRFGMEFV 296

Query: 301 NVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + +      +F VF++   +                 R   D + E+ +    G  GL 
Sbjct: 297 ELMDTLKGKADFSVFNEAAYIGG-----ICVPGCANYTRKQLDGLTEFVKRPQVGAKGLV 351

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADA 416
           YI +  D     +    + K        A++ ++  +DGD    ++G+ P K        
Sbjct: 352 YIKYNEDG----SIKSSIDKFYTQEQLLAVKEQMGAKDGDLVLILSGNQPNKTRVQLCAL 407

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  + + LG+ + N FE  WI+DFP +EW++EE+++   H+PFTMP      L       
Sbjct: 408 RLEMGERLGLRDKNKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPEK 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G +R H  ++  + F  +G + E    +FG L  AF+ G PPH
Sbjct: 468 VRAKAYDFVCNGIEVGGGSLRIHDGQLQAKMFEILGFTPEKAMAQFGFLINAFKYGAPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR V ++ G  ++R+   FP + +  D+++ +P+ +  +QL EL +++
Sbjct: 528 AGLAFGLDRFVSIMAGLDSIRDCIAFPKNNSGRDVMLDAPNCIDDKQLDELQIKL 582


>gi|295130733|ref|YP_003581396.1| aspartate--tRNA ligase [Propionibacterium acnes SK137]
 gi|291376034|gb|ADD99888.1| aspartate--tRNA ligase [Propionibacterium acnes SK137]
 gi|313771978|gb|EFS37944.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313807671|gb|EFS46158.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313810178|gb|EFS47899.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313818708|gb|EFS56422.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313830509|gb|EFS68223.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313833545|gb|EFS71259.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314925087|gb|EFS88918.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314960376|gb|EFT04478.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314973509|gb|EFT17605.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976189|gb|EFT20284.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314978650|gb|EFT22744.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314983789|gb|EFT27881.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|315080487|gb|EFT52463.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315084158|gb|EFT56134.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315085501|gb|EFT57477.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315088442|gb|EFT60418.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315096056|gb|EFT68032.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|327326336|gb|EGE68126.1| aspartate--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327330407|gb|EGE72156.1| aspartate--tRNA ligase [Propionibacterium acnes HL097PA1]
 gi|327331789|gb|EGE73526.1| aspartate--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327445770|gb|EGE92424.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327448247|gb|EGE94901.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|328753321|gb|EGF66937.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328760702|gb|EGF74268.1| aspartate--tRNA ligase [Propionibacterium acnes HL099PA1]
 gi|332675578|gb|AEE72394.1| aspartate--tRNA ligase [Propionibacterium acnes 266]
          Length = 606

 Score =  606 bits (1563), Expect = e-171,   Method: Composition-based stats.
 Identities = 229/603 (37%), Positives = 330/603 (54%), Gaps = 25/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++       +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKIIG--VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF         Y    +   G    R   D   EWAR++G  GLAYI     
Sbjct: 300 FFANTAFRVFQAP------YVGAVVMPGGASLPRRQFDAWQEWARTRGAKGLAYITI--- 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            S      GPVAK+++      I  ++  + GD+ FF AG           AR  I +  
Sbjct: 351 -SDEGVPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P ++  +E                 H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G  +   
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587

Query: 595 PKK 597
           PKK
Sbjct: 588 PKK 590


>gi|307705772|ref|ZP_07642617.1| aspartyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307620690|gb|EFN99781.1| aspartyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 587

 Score =  606 bits (1563), Expect = e-171,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 348/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQAE-LTTALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDGDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|327443566|gb|EGE90220.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
          Length = 606

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 229/603 (37%), Positives = 330/603 (54%), Gaps = 25/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++       +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKIIG--VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF         Y    +   G    R   D   EWAR++G  GLAYI     
Sbjct: 300 FFANTAFRVFQAP------YVGAVVMPGGASLPRRQFDAWQEWARTRGAKGLAYITI--- 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            S      GPVAK+++      I  ++  + GD+ FF AG           AR  I +  
Sbjct: 351 -SDEGVPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P ++  +E                 H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G  +   
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRRETG--VDAK 587

Query: 595 PKK 597
           PKK
Sbjct: 588 PKK 590


>gi|329960003|ref|ZP_08298499.1| aspartate--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328533137|gb|EGF59906.1| aspartate--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 585

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 227/598 (37%), Positives = 338/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            YR+H+CG+L +SDV   V L+GWV R R  GG+ F+D+RD YGITQ+V N +      E
Sbjct: 1   MYRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ I+G V  R ++  N++I TG IE+   ++ +L+ +   P  +    + 
Sbjct: 61  RANRLGREFVIQIEGTVNERFSK--NSHIPTGDIEIIVSELNVLNSSLTPPFTIEENTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  +  N+  R ++   +R  + ++ FIE  TPIL  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDDI+N  E + + +F+E      ++  FLR+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQDDIINLFEGMAKYLFKEIRGVE-LTGPFLRMPWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAY 358
            +        F VF     +                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMGILKGHGFTVFDNAAYIGG-----ICAEGAASYTRKQLDALTEFVKRPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  GNV     V K       + ++     + GD    ++GD   K      + R
Sbjct: 352 A--RVEADGNVK--SSVDKFYTQEVLQEMKAAFGAKPGDLILILSGDDAMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  ++
Sbjct: 408 LEMGNQLGLRDKNQFALLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+VCNG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAQEQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL L +    
Sbjct: 528 GLAYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQKQLDELNLVVEVKE 585


>gi|326576013|gb|EGE25936.1| aspartyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 598

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 228/600 (38%), Positives = 340/600 (56%), Gaps = 14/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +   + ++GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RSTYCGQVTEELIDQTITIAGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPE 122
           + RSE++L I G V  R   T N N+++GQ+EL  ++IE+L+ ++  P P         E
Sbjct: 63  AARSEYLLKITGRVRRRYEGTENPNMVSGQVELLGKEIELLAKSDTPPFPLNDDNITVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLD+RR  + + +  R +  +++R  +    F++  TP+LT ++PEGARD+LV
Sbjct: 123 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  QG+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRTRQGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I++  E + + +F+   +    +  F R+ Y DA+R Y +DKPDLR P+ + +V
Sbjct: 242 FLSDEEIMDITEGLTKNLFKTMLDVEFDT--FPRMTYADAMRDYASDKPDLRIPLKLIDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +   H EF+VFS       G  V      GG  +R   D   ++    G  GLAYI   
Sbjct: 300 ADIMQHVEFKVFSGPAQDPKGRVVALRIPNGGNMSRKQIDEYTKFVGIYGARGLAYIKVN 359

Query: 363 LDES------GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
              +             P+ K++       +  R D Q GD  FF A             
Sbjct: 360 DASNINNGVEKESGLQSPIIKNMTDEVLIELIERTDAQTGDIIFFGADKAKIVNDAMGAL 419

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  I  +L +  C  +   W++DFP +E  ++  K    H+PFT P+G +E LK +   +
Sbjct: 420 RVKIGTDLNLFTCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTRPKGSVEELKQS-PET 476

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  YD+V NG EI  G +R +  ++    F  +GISKE  E +F  L  A + G PPH
Sbjct: 477 ALSIAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKEEAELKFKFLMDALRFGAPPH 536

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V   QLRELG+RI E  K
Sbjct: 537 GGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTEAPAEVDNRQLRELGIRIREKQK 596


>gi|213966108|ref|ZP_03394295.1| aspartyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213951206|gb|EEB62601.1| aspartyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 609

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 242/605 (40%), Positives = 335/605 (55%), Gaps = 27/605 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  GDL     GS V L+GWV R R HGG+IF+D+RD  G  QVV   +S   E A  
Sbjct: 3   RTHLAGDLRADLAGSTVTLTGWVGRRRDHGGVIFIDMRDRSGYAQVVF-RNSEVAERAHH 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG---EREYP 121
           +RSE+ + + G+V  R   + N N+ +G+IE++  ++ IL+ +  LP  +          
Sbjct: 62  LRSEYCIQVTGVVEKRPEGSENPNLASGEIEVNVTELTILNESAALPFQLEDVGTSGTVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR+   K +  R  +  + R  + + +F E  TP LT S+PEGARDF+
Sbjct: 122 EEARLKYRYLDLRREGPAKIMRLRAAVNRAARKVLDSHDFTEIETPTLTRSTPEGARDFV 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLKPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF EQDD++   E +L  +F E   G TV     R+ + +A+ +YG+DKPDLR  I +  
Sbjct: 241 SFAEQDDVIALAEEILVAIFAE--AGVTVQTPIPRMTFKEAMEKYGSDKPDLRFDIPLVE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE F  + FRVF         Y    +   G    R   D   +WAR +G  GLAYI  
Sbjct: 299 CTEFFKDTTFRVFQN------DYVGAVVMDGGASQPRRQLDAWQDWARQRGAKGLAYIL- 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G +   GPVAK++     E I   +  + GD  FF AGD     +    AR  IA
Sbjct: 352 -VGEDGTLG--GPVAKNITDAEREGIAAHVGAKPGDCIFFAAGDAKSSRALLGAARGEIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGMESLKG 471
           ++LG+I    + F W++D P +E   +            +    H+ FT P+        
Sbjct: 409 KKLGLIKEGDWAFTWVVDAPLFEPAADATASGDVALGHSQWTAVHHAFTSPKPEHMDTFD 468

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D  +  A+ YD+VCNG EI  G IR H  +V  + F  +GI +E  + +FG L  AFQ 
Sbjct: 469 KDPGNALAYAYDIVCNGNEIGGGSIRIHRPDVQKRVFDVMGIGEEEAQEQFGFLLDAFQY 528

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DRIV LL G  ++REV  FP S    D L  +P+ ++ +Q +E G+  
Sbjct: 529 GAPPHGGIAFGWDRIVSLLAGVDSIREVIAFPKSGGGVDPLTDAPTPITAQQRKETGIDF 588

Query: 592 VENPK 596
              PK
Sbjct: 589 KPKPK 593


>gi|298493063|ref|YP_003723240.1| aspartyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298234981|gb|ADI66117.1| aspartyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 618

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 238/601 (39%), Positives = 351/601 (58%), Gaps = 17/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RTH CG+L    +G  V L GWV R R HGG+IFLD+RD  GI Q+V++P      +E A
Sbjct: 25  RTHYCGELRKEHIGETVTLYGWVDRRRDHGGVIFLDLRDRSGIVQIVSDPQRTRESYEAA 84

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
            ++R+E+V+ I G V  R AE++N  I TG++E+ A KIE+L+         +       
Sbjct: 85  NAIRNEYVVEITGRVTQRPAESLNPRIPTGELEIYADKIELLNAVRKQLPFQVSTADIET 144

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRR+ + +N+  R +++ +MR  +   E FIE  TP+LT S+PEGAR
Sbjct: 145 VREDLRLKYRYLDLRRERMAQNMQLRHQVVKAMRRYLEDTEGFIEIETPVLTRSTPEGAR 204

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+++PSRVN+G ++ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 205 DYILPSRVNEGEWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 263

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +++I+   E ++  +F+     + + + F R+ Y +A+ +YG+DKPD R  + 
Sbjct: 264 MEMSFMSENEIIELNEKLVCHIFKTVREID-LPHPFPRLTYKEAMDKYGSDKPDTRYGLQ 322

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V++    S F+VF+  +S     ++  IP      +         +   A   G  G
Sbjct: 323 LVDVSDVLKDSRFKVFNDAISKGGIVKILPIPNGNDVISNVRIKPGGDIFREAAEAGAKG 382

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI  R+ E+G +  +G +  +L     E I  R   + G    F A D          
Sbjct: 383 LAYI--RIRENGEIDTIGAIKDNLTPEQKEEIITRTGAKAGHLLLFAAADTGTVNKTLDR 440

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  +A+E  +I  +   F WI +FP +EWN E+K ++  H+PFT P          DL 
Sbjct: 441 IRQFVAREFNLIPPDKINFLWITEFPMFEWNAEQKGLEALHHPFTAPHPDDLQ----DLK 496

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NGFE+  G +R +  E+  Q F  +G+S E  +N+FG L  AF+ G PP
Sbjct: 497 TARAQAYDLVFNGFEVGGGSLRIYKREIQEQVFEAIGLSTEEAQNKFGFLLEAFEYGTPP 556

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL   +++R+V  FP +Q    LL  +PS V  +QL+EL +     P
Sbjct: 557 HGGIAYGVDRLVMLLAEEESIRDVIAFPKTQQARCLLTDAPSAVDTKQLKELHVASTFKP 616

Query: 596 K 596
           K
Sbjct: 617 K 617


>gi|300934546|ref|ZP_07149802.1| aspartyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 596

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 238/605 (39%), Positives = 333/605 (55%), Gaps = 27/605 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L   ++G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +S   E A  
Sbjct: 3   RTHLAGELRPENIGQEVTLTGWVGRRRDHGGVIFIDMRDRSGVAQVVF-RESEVAERAHD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYP 121
           +RSE+ + + G+V +R   + N N+ +G IE++   +E+L+ +  LP  +       E  
Sbjct: 62  LRSEYCIKVTGVVEARPEGSENPNLPSGGIEVNVTDLEVLNASAALPFQIDDPSSAGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR      +  R+++  + R  +   +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRKAQGDALRLRSKVNAAARGVLARHDFTEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLKPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +L  +++E      +S    R+ Y DA+R YG+DKPDLR  I +  
Sbjct: 241 SFVDQEDVIALAEEILVAIWKEIG--YEISTPIPRMTYADAMRLYGSDKPDLRFDIQITE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAYI  
Sbjct: 299 CTEFFKDTTFRVFQN------EYVGAVVMEGGASQPRRQLDAWQEWAKQRGAKGLAYIL- 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G ++  GPVAK++       I   +  + GD  FF AGD     +    AR  IA
Sbjct: 352 -VGEDGELS--GPVAKNITDAERAGIANHVGAKPGDCIFFAAGDTKSSRALLGAARGEIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKG 471
           ++LG+I    + F W++D P +E   +                 H+ FT P+        
Sbjct: 409 EKLGLIKEGDWAFTWVVDAPLFEPAADATASGDVALGNSAWTAVHHAFTSPKPEYLDTFD 468

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D  S  A+ YD+VCNG EI  G IR H  ++  + F  +GIS+E    +FG L  AF  
Sbjct: 469 EDPGSALAYAYDIVCNGNEIGGGSIRIHRHDIQERVFKVMGISEEEAREKFGFLLDAFAF 528

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P  +S  Q +E G+  
Sbjct: 529 GAPPHGGIAFGWDRIVSLLGGFSSIRDVIAFPKSGGGVDPLTDAPGEISAAQRKESGIDF 588

Query: 592 VENPK 596
               K
Sbjct: 589 KPKAK 593


>gi|270291765|ref|ZP_06197981.1| aspartate--tRNA ligase [Streptococcus sp. M143]
 gi|270279850|gb|EFA25691.1| aspartate--tRNA ligase [Streptococcus sp. M143]
          Length = 585

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 230/599 (38%), Positives = 349/599 (58%), Gaps = 17/599 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLATGAVELNVTALTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  + +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQAD-LTNTLGLEDKDLILFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         +L  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGNLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL +++  +  K+
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELEIQLKPSALKV 585


>gi|149177716|ref|ZP_01856316.1| Aspartyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148843366|gb|EDL57729.1| Aspartyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 587

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 237/589 (40%), Positives = 340/589 (57%), Gaps = 10/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           RTH+CG+L    VG  V L+GWV R R HGG+ F+D+RD YG+TQ+V NPD      E+A
Sbjct: 3   RTHTCGELRTDHVGQTVTLAGWVIRGRDHGGLAFIDLRDRYGVTQIVFNPDRDAAMHELA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +S+R+E V+ + G V+ R  +  N  + TG+IE+ A ++++L+ ++  P          E
Sbjct: 63  RSLRAEDVIQVSGEVVLRD-DRENEKLATGKIEIRAHELKVLNKSKTPPFEPGTSELPNE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R  YRFLDLR + L + +  R R+    R       F+E  TPIL  S+PEGARD+LV
Sbjct: 122 ELRLTYRFLDLRSERLQEALKVRHRLTKLTRDYFDEHQFLEIETPILGRSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++GSFYALPQ+PQ YKQ+LM  G+DRY QIA CFRDED R+DR P EF Q+D+EM+
Sbjct: 182 PSRVHEGSFYALPQSPQIYKQILMIGGYDRYMQIARCFRDEDLRADRQP-EFTQIDLEMA 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQ+DIL  ++ ++  + +E  +         R  Y D + +YG+DKPDLR  + + +V
Sbjct: 241 FVEQEDILTLIDGLIARILKELRSIEITEPL-PRYDYHDVMEKYGSDKPDLRFGLELIDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            E     +F VF K +            A     +R   D + E+    G  GLA+    
Sbjct: 300 GEIAASCDFAVFKKTMETGGRVRGLNAKAAADRYSRKDIDGLTEFVGEYGAKGLAFFKVT 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                +     P+AK  +  + + I   ++ + GD  FF+A       +  A  RN + +
Sbjct: 360 -----DEGLHSPIAKFFSDEDKQKIMEAMNAEVGDLLFFVADQCAVTSAALAALRNRLGK 414

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +   + FE CW+++FP   +NEEEK+ D  H+PF  P         +D   ++A  Y
Sbjct: 415 ELELYGPDDFECCWVVNFPLLSYNEEEKRWDAEHHPFCQPVEEDVQYFESDPAKVRAQSY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+ASG +R H  +V    F  +GIS E  E RFG L +A + G PPH G A G
Sbjct: 475 DLVMNGYELASGSVRVHDQKVQQTIFDLLGISAEEAEERFGFLLQALRYGAPPHAGAALG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR+VMLL G  N+R+V  FP +Q   DLL G+PS V   QLR+L +++
Sbjct: 535 LDRLVMLLCGNDNIRDVIAFPKTQKAADLLSGAPSEVDPHQLRDLRIKV 583


>gi|221134423|ref|ZP_03560728.1| aspartyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 590

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 214/591 (36%), Positives = 326/591 (55%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CG++  S +   V ++GWV++ R  GG+IFLDIRD  GI QVV +PD    F  A 
Sbjct: 2   RTDYCGNIDASFIDQTVTINGWVNKRRDLGGVIFLDIRDREGIVQVVFDPDVEDVFATAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+ + I G V +R    +NA++ TG IE+  + +EI + +    LP+   +E  E 
Sbjct: 62  SVRNEFCVSITGRVRARPDSQVNADMRTGAIEILGKGLEIFNKS--AALPLDWNQENSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +V R+++  ++R  +  ++F++  TPILT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPVMTERLVFRSKVTAAVRRFLEDQDFLDIETPILTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG D+Y+QI  CFRDED R+DR P EF Q+D+E +F
Sbjct: 180 SRTHKGQFFALPQSPQLFKQLLMMSGMDKYYQIVKCFRDEDLRADRQP-EFTQIDIETTF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++ D ++   E ++R +F+   N +    +F ++ Y DA+R YG+DKPDLRNP+ + +V 
Sbjct: 239 LDADGVMAITEKMIRELFQTMLNVD--LGDFPQMTYADAMRLYGSDKPDLRNPLQIIDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +   G         G   +R   D    +    G  GLA++    
Sbjct: 297 QIMSSVEFKVFSGPANDPKGRVAMLCVPGGASLSRKQLDEYANFVGIYGAKGLAWMKIND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      P+AK L     E +       DGD   F +             R  +  +
Sbjct: 357 IAKGAEGVQSPIAKFLTPEVIEQLLAASGANDGDILLFGSDTYHVVTEALGALRLKVGND 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             + N   +   W++DFP +E  E + +    H+PFT P+         D  +  +  YD
Sbjct: 417 FEL-NEGDWRPLWVVDFPMFE--EFDGQYHALHHPFTAPRDMTPEQLAADPANALSNAYD 473

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H  ++    F  +GISKE  +++FG L  A Q G PPH G+A G+
Sbjct: 474 MVLNGVELGGGSVRIHQQDMQATVFDILGISKEEAQSKFGFLLEALQYGTPPHAGLAFGL 533

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DR+VML+  A ++R+V  FP +      L  +P   + EQL EL +  +  
Sbjct: 534 DRLVMLMTNATSIRDVMAFPKTTTAACPLTSAPGVANAEQLTELAIASIAK 584


>gi|325689244|gb|EGD31250.1| aspartate--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 584

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 230/597 (38%), Positives = 344/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+VL + G V +R  E  N  + TG +EL  + + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVLEVTGKVAAR--EQANDKLTTGSVELHVESLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD
Sbjct: 119 VNDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVHQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E    + V   F R+ YDDA+  YG DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDITEGLIARVMKETKGID-VELPFPRMKYDDAMALYGVDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G +A  GPVAK L  + T  +   L +++ D   F+A       +     R  
Sbjct: 353 KV---ADGELA--GPVAKFLTDL-TNPLTEALQLENNDLVLFVADTLEVANAALGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +   +  + F  +G S +    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKALQERMFKALGFSAQEAAEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR  MLL G +N+REV  FP +    D +  +PS VSV QL EL L++  + +
Sbjct: 527 ALGLDRFAMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQVEAHEE 583


>gi|297626348|ref|YP_003688111.1| Aspartyl-tRNA synthetase (aspartate--tRNA ligase) (AspRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922113|emb|CBL56681.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 615

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 229/615 (37%), Positives = 333/615 (54%), Gaps = 23/615 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  S+ G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASNEGETVTLAGWVAHRRDHGGVAFIDLRDASGVAQVVIRDEVLASSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G++  R     N  + TG IE++   +E+L+ A  LP PV       E  
Sbjct: 63  LRNEYCIAVTGVIEHRPQGNENPEMPTGDIEVNISDLEVLNAAAPLPFPVDEYTNVGEDT 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR  +H  +V R+ + +++R  +   +F +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLRYRYLDLRRPRMHDALVLRSHVTHAIRGVLEGRDFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R++ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLSPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E V+   ++       +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVMALGEEVMAACWKLVG--VDLPRPMRRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAYI   + 
Sbjct: 300 FFADTPFRVFQAP------YVGAVVMPGGAAQPRRQFDAWQEWAKQRGARGLAYIV--VT 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           +SG ++  GPVAK+++      I  ++  + GD+ FF AG           AR  I    
Sbjct: 352 DSGELS--GPVAKNISDTEKAGIAEKVGAKPGDAIFFAAGARTASQELLGAARLEIGARC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDL 474
            + +   + FCW++D P ++   E                 H+ FT P+         D 
Sbjct: 410 ELYDPKDWAFCWVVDAPLFKPTSEAVAEGDVAVGAGAWTAVHHAFTSPKPESMDSFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  ++ YD VCNG E+  G IR H  +V  + F  +G+S+E  + +FG L  AF+ G P
Sbjct: 470 GSALSYGYDFVCNGNEVGGGSIRIHRRDVQERVFKVMGLSQEEAQQKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G   +R+V  FP + N  D L  +P+ +S +Q RE G+     
Sbjct: 530 PHGGIAFGLDRLVMLLGGFDTIRDVIAFPKTGNGFDPLTQAPAPISAQQRREAGVDAKPA 589

Query: 595 PKKILKISVTTILRN 609
           PKK        +   
Sbjct: 590 PKKDGASDKDGVPEE 604


>gi|153938160|ref|YP_001392332.1| aspartyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|170756537|ref|YP_001782689.1| aspartyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|166225340|sp|A7GHS2|SYD_CLOBL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229559868|sp|B1IMD7|SYD_CLOBK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|152934056|gb|ABS39554.1| aspartate--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|169121749|gb|ACA45585.1| aspartyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|295320325|gb|ADG00703.1| aspartate--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 593

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 233/594 (39%), Positives = 343/594 (57%), Gaps = 12/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG+   +++G  V + GWV R R  GG+IF+D+RD  GI Q+V     +   FE 
Sbjct: 9   KRTIMCGESRENNIGEKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           + +V+SE+ + + G ++ R   + N ++ TG +EL  + I+ILS +E  P+ +    +  
Sbjct: 69  SDNVKSEYCIAVTGEIVKRQ--SPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDAS 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + K  + R +    +R  +    F+E  TPILT S+PEGARD+L
Sbjct: 127 ENIRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR  +G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE+DD++   E +L  VF+E    + V     R+ Y  A+ +YG+DKPDLR  + +++
Sbjct: 246 SFVEEDDVIELNERLLAKVFKEVGGID-VKLPIERMPYKIAMEKYGSDKPDLRFGMEIND 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE   +SEF+VF   +                   R   D++ ++ ++    GLA+I +
Sbjct: 305 LTEAVKNSEFKVFKGAIEAGGSVRAIK-AENCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE        P+AK L     +AI  ++D + GD    +A             R HIA
Sbjct: 364 KEDE-----IKSPIAKFLTEEEMKAILEKMDAKAGDLILIVADKNNVVFESLGALRLHIA 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL IIN N F F WI +FP   +NEEE +    H+PFT        L   +   ++A  
Sbjct: 419 KELDIINKNEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIELLDTEPGKVRAKA 478

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H S++  + FS +G +KE    RFG L  AF+ G PPHGG+A 
Sbjct: 479 YDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGLAY 538

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR++M L G +N+++V  FP +QN    L  +P+ V   QL ELG++ +E  
Sbjct: 539 GLDRMIMFLAGTENIKDVITFPKNQNAFCPLTEAPNVVDENQLEELGIKKIEKE 592


>gi|296113406|ref|YP_003627344.1| aspartyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921100|gb|ADG61451.1| aspartyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 612

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 228/600 (38%), Positives = 340/600 (56%), Gaps = 14/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +   + ++GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 17  RSTYCGQVTEELIDQTITIAGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 76

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPE 122
           + RSE++L I G V  R   T N N+++GQ+EL  ++IE+L+ ++  P P         E
Sbjct: 77  AARSEYLLKITGRVRRRYEGTENPNMVSGQVELLGKEIELLAKSDTPPFPLNDDNITVSE 136

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLD+RR  + + +  R +  +++R  +    F++  TP+LT ++PEGARD+LV
Sbjct: 137 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLV 196

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  QG+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 197 PSRTRQGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 255

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I++  E + + +F+   +    +  F R+ Y DA+R Y +DKPDLR P+ + +V
Sbjct: 256 FLSDEEIMDITEGLTKNLFKTMLDVEFDT--FPRMTYADAMRDYASDKPDLRIPLKLIDV 313

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +   H EF+VFS       G  V      GG  +R   D   ++    G  GLAYI   
Sbjct: 314 ADIMQHVEFKVFSGPAQDPKGRVVALRIPNGGNMSRKQIDEYTKFVGIYGARGLAYIKVN 373

Query: 363 LDES------GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
              +             P+ K++       +  R D Q GD  FF A             
Sbjct: 374 DASNINNGVEKESGLQSPIIKNMTDEVLIELIERTDAQTGDIIFFGADKAKIVNDAMGAL 433

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  I  +L +  C  +   W++DFP +E  ++  K    H+PFT P+G +E LK +   +
Sbjct: 434 RVKIGTDLNLFTCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTRPKGSVEELKQS-PET 490

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  YD+V NG EI  G +R +  ++    F  +GISKE  E +F  L  A + G PPH
Sbjct: 491 ALSIAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKEEAELKFKFLMDALRFGAPPH 550

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V   QLRELG+RI E  K
Sbjct: 551 GGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTEAPAEVDNRQLRELGIRIREKQK 610


>gi|149011973|ref|ZP_01833121.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147763928|gb|EDK70861.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
          Length = 587

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 234/596 (39%), Positives = 349/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEKEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQ-EELTTALALEDKDLVLFVADTLEVVNATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ G       DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEGTAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|302525826|ref|ZP_07278168.1| aspartyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302434721|gb|EFL06537.1| aspartyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 598

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 236/610 (38%), Positives = 339/610 (55%), Gaps = 22/610 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+IF+D+RD  G+ QVV        E A +
Sbjct: 3   RTHQAGTLRAGQAGQTVTLTGWVARRRDHGGVIFIDLRDASGVAQVVFREGEMA-ERAHA 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + + G V  R     N +I TG+IE+ A ++E+LS A  LP P+    +  E +
Sbjct: 62  LRSEFCVKVVGEVSKRPEGNANPDIATGEIEVLATELEVLSEAAPLPFPIDDRVDVGEEV 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR      I  R+ +    R  + A++F+E  TP +T S+PEGARDFLVP+
Sbjct: 122 RLKYRYLDLRRSGPAAAIRLRSEVSRVAREVLHAQDFVEIETPTMTRSTPEGARDFLVPA 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RYFQIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 182 RLKPGSWYALPQSPQLFKQLLMVGGMERYFQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E +++ +++     + ++    RI Y +A+ +YG+DKPDLR  + +  +T+
Sbjct: 241 EQDDVIAVGEAIVKALWKLIG--HEIATPIPRITYREAMAKYGSDKPDLRFDLEITELTD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    + A G    R   D   EWA+ +G  GLAY+   ++
Sbjct: 299 FFSDTPFRVFQAP------YVGAVVMAGGASQPRRQLDAWQEWAKQRGAKGLAYVL--VN 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L+      +      + GD  FF AG           AR+ I ++L
Sbjct: 351 EDGTLG--GPVAKNLSETERANVAEAAGAKPGDCIFFAAGKVSAAQPLLGAARDEIGRKL 408

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE--------EKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           G+I+ + + F W++D P +   E+          K    H+ FT P          D  +
Sbjct: 409 GLIDEDAWSFVWVVDAPLFAPVEDIGDDVAVGSGKWTAVHHAFTSPTPEWIDKFEQDPGN 468

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A+ YDLVCNG EI  G IR H  +V  + F+ +G+ +E  + +FG L  AFQ G PPH
Sbjct: 469 ALAYAYDLVCNGNEIGGGSIRIHREDVQKRVFALMGLGEEEAQEKFGFLLEAFQFGAPPH 528

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA G DRIVMLL  A ++R+V  FP +    D L  +P+ ++ +Q +E G+       
Sbjct: 529 GGIAFGWDRIVMLLAKADSLRDVIAFPKTGGGYDPLTAAPAPITAQQRKEAGIDAKPAVP 588

Query: 597 KILKISVTTI 606
           +    +    
Sbjct: 589 QSKPAAAQEK 598


>gi|296875570|ref|ZP_06899642.1| aspartate--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296433494|gb|EFH19269.1| aspartate--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 584

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 231/598 (38%), Positives = 348/598 (58%), Gaps = 17/598 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVREEHIGTHITLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPETVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + GLV +R  E  N N+ TG +EL  + I +L+ A+  P  +    E
Sbjct: 61  ATAESIRSEYVVEVTGLVEAR--EQANPNLPTGAVELKVEAITVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGIE-VTLPFPRMNYDDAMALYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T+     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTDLVKGVDFKVFSEA----PTVKAIVVKGAADHYSRKDIDKLTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +           GPVAK L  + T  +   L ++D D   F+A       +     R  
Sbjct: 353 KY-----AEGTLNGPVAKFLTDL-TSDLTAALQLEDKDLVLFVADTLEVANATLGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ N + F W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LAKELDLIDNNQYNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETEHELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G +KE    +FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINHKDLQERMFKALGFTKEAANEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L++    ++
Sbjct: 527 AIGLDRFVMLLAGEDNIREVIAFPKNNKATDPMTQAPSVVSEKQLDELNLQVEVAEQE 584


>gi|322376004|ref|ZP_08050514.1| aspartate--tRNA ligase [Streptococcus sp. C300]
 gi|321278954|gb|EFX55997.1| aspartate--tRNA ligase [Streptococcus sp. C300]
          Length = 587

 Score =  605 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 232/596 (38%), Positives = 348/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEMTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMSLYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  + +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQAD-LTAALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQDETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|282853872|ref|ZP_06263209.1| aspartate--tRNA ligase [Propionibacterium acnes J139]
 gi|282583325|gb|EFB88705.1| aspartate--tRNA ligase [Propionibacterium acnes J139]
 gi|314981340|gb|EFT25434.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315092201|gb|EFT64177.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315092866|gb|EFT64842.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315103613|gb|EFT75589.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|327327435|gb|EGE69211.1| aspartate--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 606

 Score =  605 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 230/603 (38%), Positives = 330/603 (54%), Gaps = 25/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++       +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKIIG--VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF         Y    +   G    R   D   EWAR++G  GLAYI     
Sbjct: 300 FFANTAFRVFQAP------YVGAVVMPGGASLPRRQFDAWQEWARTRGAKGLAYITI--- 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            S   A  GPVAK+++      I  +   + GD+ FF AG           AR  I +  
Sbjct: 351 -SDEGAPEGPVAKNISEEEKAGIAEKAGAKPGDAIFFAAGSKTSCQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P ++  +E                 H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G  +   
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587

Query: 595 PKK 597
           PKK
Sbjct: 588 PKK 590


>gi|71278161|ref|YP_268840.1| aspartyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|97196634|sp|Q483C7|SYD_COLP3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71143901|gb|AAZ24374.1| aspartyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 601

 Score =  605 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 211/598 (35%), Positives = 336/598 (56%), Gaps = 14/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+  CG++  S +G  + L GWV++ R  G +IFLD+RD  G+ QVV +PD     + A 
Sbjct: 2   RSLYCGEVNESHIGQEITLCGWVNKRRDLGAVIFLDLRDREGLVQVVYDPDLPEVIKKAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + I G V +R    +N  + TG IE+   ++ IL+ +    LP+   +   E 
Sbjct: 62  TLRNEFCVQIKGKVRARPEGQVNKGMKTGGIEVLGLELTILNKSAP--LPLDSNQVNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  + + +  R ++ +++R  + ++ F++  TPILTA++PEGARD+LVP
Sbjct: 120 LRLKYRYLDLRRVEMTERLRFRAKVTSAVRSSLESQGFLDIETPILTAATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR ++G F+ALPQ+PQ +KQLLM SG +RY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRTHKGQFFALPQSPQLFKQLLMMSGMERYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D ++   E ++R +F+E  + +     F R+ Y +A+ R+G+DKPDLRNP+ + +V 
Sbjct: 239 MSSDQVMEVTEKMIRELFQELLDVDLGE--FPRMPYSEAMTRFGSDKPDLRNPLELIDVD 296

Query: 304 EHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     EF+VFS   +  N    V  +P      +R   D + ++    G  G+ ++   
Sbjct: 297 DILKDVEFKVFSGPANDENGRVAVICLPQGAAKFSRKGLDELTKFVGIYGAKGMPWLKVN 356

Query: 363 LDES----GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
             ++    G      P+ K L+     A+  R + + GD  FF A             R 
Sbjct: 357 DIDAALSTGVEGLQSPILKFLSSDEAIALLKRTNAKTGDIIFFGADQYNVVTESLGALRL 416

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL ++    ++  W++DFP +E  E +  +   H+PFT P          + +   
Sbjct: 417 KLGEELDLLQ-GEWKPLWVVDFPMFE--EVDGHMHAIHHPFTAPTNLTAEQLEANPVGAL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G +R H  ++    F  +GIS E  E +FG L  A Q G PPH G
Sbjct: 474 SDAYDMVLNGCELGGGSVRIHNQDMQAAVFRILGISDEEAEEKFGFLLEALQYGAPPHAG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G+DR+VML+ GA ++R+V  FP +      L  +P   + EQLRELG+ ++E  K
Sbjct: 534 LAFGLDRLVMLMTGASSIRDVMAFPKTNTAACPLTNAPGKANPEQLRELGVAVLEVKK 591


>gi|307707786|ref|ZP_07644264.1| aspartyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616168|gb|EFN95363.1| aspartyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 587

 Score =  605 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 232/596 (38%), Positives = 347/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T      +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTAVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTSIQAE-LTTALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|303254918|ref|ZP_07341002.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303259616|ref|ZP_07345592.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262061|ref|ZP_07348006.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303264518|ref|ZP_07350437.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303267190|ref|ZP_07353056.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303270036|ref|ZP_07355759.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|301802784|emb|CBW35558.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302598100|gb|EFL65162.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302636701|gb|EFL67191.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302639168|gb|EFL69627.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302640430|gb|EFL70854.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643254|gb|EFL73535.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302645888|gb|EFL76116.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|332198535|gb|EGJ12618.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
          Length = 587

 Score =  605 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 348/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQ-EELTTALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|125719049|ref|YP_001036182.1| aspartyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125498966|gb|ABN45632.1| Aspartyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 584

 Score =  605 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 346/597 (57%), Gaps = 17/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  V L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVRKEHVGQEVTLKGWVARRRDLGGLIFIDLRDREGIMQLVINPETVAAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+VL + G V +R  E  N  + TG +EL  + + IL+ A+  P  +    E
Sbjct: 61  STAESLRSEYVLEVTGKVAAR--EQANDKLATGSVELHVENLAILNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    F++  TP L+ S+PEGARD
Sbjct: 119 VNDDTRLRYRYLDLRRPEILENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV++G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVHKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I +  E ++  V +E    + VS  F R+ YDDA+  YG DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDITEGLIARVMKETKGID-VSLPFPRMKYDDAMALYGVDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTELVKGVDFKVFSEA----PAVKAIVVKNAADKYSRKDIDKLTEQAKQHGAKGLAWM 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G +A  GP+AK L  + T  +   L +++ D   F+A       +     R  
Sbjct: 353 KV---ADGELA--GPIAKFLTDL-TSQLTEALQLENNDLVLFVADTLEVANAALGALRVR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ   E     DL  ++A
Sbjct: 407 LAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S +    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDLQERIFKALGFSAQEATEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G+DR VMLL G +N+REV  FP +    D +  +PS VSV QL EL L++  + +
Sbjct: 527 ALGLDRFVMLLAGEENIREVIAFPKNNKASDPMTQAPSPVSVAQLEELSLQVEAHEE 583


>gi|87311863|ref|ZP_01093975.1| Aspartyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87285394|gb|EAQ77316.1| Aspartyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 594

 Score =  605 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 227/595 (38%), Positives = 338/595 (56%), Gaps = 9/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RTH+CG+L  + +G  V L GWV   R HGG +F+D+RD YG TQVV +P+S     E A
Sbjct: 3   RTHTCGELRAAQIGLEVTLCGWVDSYRDHGGGLFIDLRDRYGKTQVVFSPESGAAVQEAA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +R+E V+ + G V +R A T+N  +ITG+IE+   ++EIL+  +  P     +    E
Sbjct: 63  RGLRNEDVIKVRGQVSARPAGTVNPKLITGEIEIRCVELEILNKCKTPPFLPTQQDMPGE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R K+R+LDLRR  + + ++ R+RII  MR     + FI+  TPIL  S+PEGARD+LV
Sbjct: 123 DLRLKHRYLDLRRPAMQETLMLRSRIIKMMRDYFEEQQFIDVETPILGRSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ YKQ+LM +G+DRY Q+A CFRDED R+DR P EF QLD+EM+
Sbjct: 183 PSRVHHGHFYALPQSPQLYKQILMMAGYDRYVQVARCFRDEDLRADRQP-EFTQLDVEMA 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++DD++  ++ +++   +E    + V     ++ YD+A+ R+G D PDLR  + + + 
Sbjct: 242 FVDKDDVIGIIDGLVQRTAKELKGLD-VQLPLPQMTYDEAMERFGHDAPDLRFGMELVDA 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA-RSQGQPGLAYIFW 361
           T+    +EFRVF  +                   +R   D + E+     G  GLA+  +
Sbjct: 301 TDLAAEAEFRVFKAVAEAGNRVRGINAKGAADKYSRRLIDELTEFVSNDFGAKGLAW--F 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + +  G +A   P+AK+         + R + + GD    +A      C      R  +A
Sbjct: 359 KCEADGKLA--SPIAKNFTEELLAKFKDRFEAEPGDLILIVADKFSVTCKALYALRKRLA 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            EL + +     F WI++FP ++ +EE  +    H+PFT P+        +D    +A  
Sbjct: 417 AELKLYDPKQMHFSWIVEFPMFDHDEETDRWVAMHHPFTAPRPQDLEHLESDPGKCRAVA 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E   G +R H ++V  Q F  +G++ E  + RFG L  A Q G PPHGGIA 
Sbjct: 477 YDLVINGSEAGGGTMRIHDNKVQQQVFGLLGMTPEDAKERFGFLLDALQYGAPPHGGIAL 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GIDR VML  G  N+R+   FP +Q   DL+  +P  V  +QL EL ++I+   +
Sbjct: 537 GIDRWVMLFGGLDNIRDCIAFPKTQRAADLMTDAPGNVDRKQLDELAIKILRPEE 591


>gi|225857687|ref|YP_002739198.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|254781757|sp|C1CN60|SYD_STRZP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225726232|gb|ACO22084.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 587

 Score =  605 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 234/596 (39%), Positives = 349/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRNLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEKEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQ-EELTTALALEDKDLVLFVADTLEVVNATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ G       DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEGTAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|145295757|ref|YP_001138578.1| aspartyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|166225342|sp|A4QEL0|SYD_CORGB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|140845677|dbj|BAF54676.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 608

 Score =  605 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 240/605 (39%), Positives = 331/605 (54%), Gaps = 27/605 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L   + G  V L+GWV+R R HGG+IF+D+RD  GI QVV   +    E A +
Sbjct: 3   RTHLSGELRKENAGQSVTLTGWVNRRRDHGGVIFIDLRDRTGIAQVVFRNEDVA-ERAHA 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYP 121
           +RSE+VL + G+V  R   + N N+ +G IE+S  + E+L+ +  LP  +       E  
Sbjct: 62  LRSEFVLRVTGVVEERPEGSQNPNLASGDIEVSVTEFEVLNESAPLPFQIEDSSSAGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR      +  R+    + R  + + +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRPVQANALRLRSAANKAARTVLDSHDFTEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G+FYALPQ+PQ +KQLL  +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLRPGTFYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E ++  V++       +     R+ Y DA+RRYG+DKPDLR  I +  
Sbjct: 241 SFVDQDDVIALGEEIISEVWKLIG--YEIKTPIPRMTYADAMRRYGSDKPDLRFDIEITE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAYI  
Sbjct: 299 CTEFFQDTTFRVFKN------EYVGAVVMTGGASQPRRQLDAWQEWAKQRGAKGLAYIL- 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G ++  GPVAK++       I   +  Q GD  FF AGD     +    AR  IA
Sbjct: 352 -VGEDGELS--GPVAKNITDAERAGIAAHVGAQPGDCIFFAAGDTKSSRALLGAARGEIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKG 471
           ++L +I    + F WI+D P +E   +            K    H+ FT P+        
Sbjct: 409 KKLDLIKEGDWAFTWIVDAPMFEPAADATASGDVALGNSKWTAVHHAFTSPKPEFLDNFD 468

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            +     A+ YD+VCNG EI  G IR H  +V  + F  +GI+ E    +FG L  AF  
Sbjct: 469 TNPGDALAYAYDIVCNGNEIGGGSIRIHQRDVQERVFEVMGITGEEAREKFGFLLDAFAF 528

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ ++ +Q +E G+  
Sbjct: 529 GAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGIDPLTDAPAAITPQQRKEAGIDA 588

Query: 592 VENPK 596
              PK
Sbjct: 589 KPKPK 593


>gi|326559250|gb|EGE09681.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 598

 Score =  605 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 227/600 (37%), Positives = 339/600 (56%), Gaps = 14/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +   + ++GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RSTYCGQVTEELIDQTITIAGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPE 122
           + RSE++L I G V  R   T N N+++GQ+EL  ++IE+L+ ++  P P         E
Sbjct: 63  AARSEYLLKITGRVRRRYEGTENPNMVSGQVELLGKEIELLAKSDTPPFPLNDDNITVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLD+RR  + + +  R +  +++R  +    F++  TP+LT ++PEGARD+LV
Sbjct: 123 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  QG+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRTRQGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I++  E + + +F+   +    +  F R+ Y DA+R Y +DKPDLR P+ + +V
Sbjct: 242 FLSDEEIMDITEGLTKNLFKTMLDVEFDT--FPRMTYADAMRDYASDKPDLRIPLKLIDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +   H EF+VFS       G  V      GG  +R   D   ++    G  GLAYI   
Sbjct: 300 ADIMQHVEFKVFSGPAQDPKGRVVALRIPNGGNMSRKQIDEYTKFVGIYGARGLAYIKVN 359

Query: 363 LDES------GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
              +             P+ K++       +  R D Q GD  FF A             
Sbjct: 360 DASNINNGVEKESGLQSPIIKNMTDEVLIELIERTDAQTGDIIFFGADKAKIVNDAMGAL 419

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  I  +L +  C  +   W++DFP +E  ++  K    H+PFT P+G +  LK +   +
Sbjct: 420 RVKIGTDLNLFTCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTRPKGSVAELKQS-PET 476

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  YD+V NG EI  G +R +  ++    F  +GISKE  E +F  L  A + G PPH
Sbjct: 477 ALSIAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKEEAELKFKFLMDALRFGAPPH 536

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V   QLRELG+RI E  K
Sbjct: 537 GGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTEAPAEVDNRQLRELGIRIREKQK 596


>gi|168491642|ref|ZP_02715785.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|182685049|ref|YP_001836796.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|221232823|ref|YP_002511977.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225855603|ref|YP_002737115.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|238691140|sp|B2IN32|SYD_STRPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781754|sp|B8ZPN7|SYD_STRPJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781756|sp|C1CH44|SYD_STRZJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|182630383|gb|ACB91331.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|183574107|gb|EDT94635.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|220675285|emb|CAR69878.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225722187|gb|ACO18040.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 587

 Score =  605 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 348/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQ-EELTTALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|149002950|ref|ZP_01827861.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|149023814|ref|ZP_01836275.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|237649537|ref|ZP_04523789.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237822669|ref|ZP_04598514.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|147758953|gb|EDK65948.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147929610|gb|EDK80603.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 587

 Score =  605 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 234/596 (39%), Positives = 349/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+ L+V        +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEALAVK----AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQ-EELTTALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|148381005|ref|YP_001255546.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153931829|ref|YP_001385376.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153936865|ref|YP_001388783.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|166225338|sp|A7FY03|SYD_CLOB1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225339|sp|A5I6D5|SYD_CLOBH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148290489|emb|CAL84617.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152927873|gb|ABS33373.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152932779|gb|ABS38278.1| aspartate--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 593

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 234/594 (39%), Positives = 343/594 (57%), Gaps = 12/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG+   +++G  V + GWV R R  GG+IF+D+RD  GI Q+V     +   FE 
Sbjct: 9   KRTIMCGESRENNIGQKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           + +V+SE+ + + G ++ R   + N ++ TG +EL  + I+ILS +E  P+ +    +  
Sbjct: 69  SDNVKSEYCIAVTGEIVKRQ--SPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDAS 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + K  + R +    +R  +    F+E  TPILT S+PEGARD+L
Sbjct: 127 ENIRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR  +G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE+DD++   E +L  VF+E    + V     R+ Y  A+ +YG+DKPDLR  + +++
Sbjct: 246 SFVEEDDVIELNERLLAKVFKEVGGID-VKLPIERMPYKIAMEKYGSDKPDLRFGMEIND 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE   +SEF+VF   +                   R   D++ ++ ++    GLA+I +
Sbjct: 305 LTEAVKNSEFKVFKGAIEAGGSVRAIK-AENCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE        P+AK L     +AI  ++D + GD    +A             R HIA
Sbjct: 364 KEDE-----IKSPIAKFLTEEEMKAILEKMDAKAGDLILIVADKNNVVFESLGALRLHIA 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL IIN N F F WI +FP   +NEEE +    H+PFT        L G +   ++A  
Sbjct: 419 KELDIINKNEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIELLGTEPGKVRAKA 478

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H S+   + FS +G +KE    RFG L  AF+ G PPHGG+A 
Sbjct: 479 YDIVLNGEELGGGSIRIHDSKFQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGLAY 538

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR++M L G +N+++V  FP +QN    L  +P+ V   QL ELG++ +E  
Sbjct: 539 GLDRMIMFLAGTENIKDVITFPKNQNAFCPLTEAPNVVDENQLEELGIKKIEKE 592


>gi|307710971|ref|ZP_07647394.1| aspartyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617211|gb|EFN96388.1| aspartyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 587

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 231/596 (38%), Positives = 347/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPV+K L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVSKFLTSIQAE-LTTALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDGDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G   E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFLAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|315924153|ref|ZP_07920379.1| aspartate--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622555|gb|EFV02510.1| aspartate--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 593

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 347/593 (58%), Gaps = 9/593 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61
           +R+  CGD+  +  G  V+L+GW    R  GG+IF+D+RD  GI Q+V N + A   F I
Sbjct: 6   FRSAVCGDIDANKNGQAVKLAGWADSRRDLGGVIFVDLRDRSGIVQLVINEEDAGADFAI 65

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VRSE+VL I+G V  R AE +N  + TGQ+E+   ++ IL  +   P+ V  + +  
Sbjct: 66  AEKVRSEYVLNIEGTVRKREAENVNPKMATGQMEVLVSRLTILDTSATPPIYVEDDDKSG 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLR+    K ++ R R  + +R  +  E F E  TPIL  ++PEGARDFL
Sbjct: 126 ENVRLKYRYLDLRKPKNQKILMTRARAASIVRDYLNHEGFCEIETPILGKTTPEGARDFL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV +G+F+ LPQ+PQ +KQ+LM SG DRY+QIA CFRDED R DR P EF Q+DMEM
Sbjct: 186 VPSRVQKGNFFGLPQSPQLFKQILMISGMDRYYQIAKCFRDEDLRQDRQP-EFTQIDMEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV +DDI+  ME ++  VF+E      +   F R+ + +A+ R+G+DKPD+R  + +HN
Sbjct: 245 SFVTKDDIMPIMEGMIAQVFKEIRGVE-LERPFPRMTWQEAMDRFGSDKPDMRFGMELHN 303

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    S+F+VFS  +               G  ++     + ++A+     GLA+I  
Sbjct: 304 LSDILKDSDFKVFSDAIQRGGSVRAVIAKDAQGKLSKKTLKNLEKFAKIYKAKGLAWIDV 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +     +     P+ K ++    EAI   +  ++GD  F +A      C+     R  +A
Sbjct: 364 K-----DEGQKSPILKFISEEEKEAIYKEMGAENGDYIFMVADTDQIVCTALGQLRLELA 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG    + F+F W++DFP  E++ E+ +    H+PFT P      L       +++  
Sbjct: 419 KRLGFDLSDQFKFLWVIDFPLLEYDAEQGRYVAVHHPFTAPLDEDIPLLDTAPEKVRSDA 478

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  ++  + F  + +++E V+ +FG L  A + G PPHGG+A 
Sbjct: 479 YDMVVNGVELGGGSIRIHNGDIQDKMFKALNLNEETVQTQFGFLMEALKYGTPPHGGLAF 538

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G DR++M+LL   N+R+V  FP +QN  DL+  +P+  S++QL +LG+ + ++
Sbjct: 539 GFDRLIMMLLDLDNIRDVIAFPKTQNHSDLMTEAPAQASLDQLIDLGISVDDD 591


>gi|148984412|ref|ZP_01817700.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|148998089|ref|ZP_01825602.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168575984|ref|ZP_02721889.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|194398266|ref|YP_002038702.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|307068730|ref|YP_003877696.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|238690808|sp|B5E3C1|SYD_STRP4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|147756099|gb|EDK63142.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|147923189|gb|EDK74303.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|183578094|gb|EDT98622.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|194357933|gb|ACF56381.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|301800860|emb|CBW33517.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
 gi|306410267|gb|ADM85694.1| Aspartyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 587

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 349/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+ L+     +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEALA----VKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQ-EELTTALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|326570106|gb|EGE20151.1| aspartyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 598

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 228/600 (38%), Positives = 340/600 (56%), Gaps = 14/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +   + ++GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RSTYCGQVTEELIDQTITIAGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPE 122
           + RSE++L I G V  R   T N N+++GQ+EL  ++IE+L+ ++  P P         E
Sbjct: 63  AARSEYLLKITGRVRRRYEGTENPNMVSGQVELLGKEIELLAKSDTPPFPLNDDNITVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLD+RR  + + +  R +  +++R  +    F++  TP+LT ++PEGARD+LV
Sbjct: 123 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  QG+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRTRQGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I++  E + + +F+   +    +  F R+ Y DA+R Y +DKPDLR P+ + +V
Sbjct: 242 FLSDEEIMDITEGLTKNLFKTMLDVEFDT--FPRMTYADAMRDYASDKPDLRIPLKLIDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +   H EF+VFS       G  V      GG  +R   D   ++    G  GLAYI   
Sbjct: 300 ADIMQHVEFKVFSGPAQDPKGRVVALRIPNGGEMSRKQIDEYTKFVGIYGARGLAYIKVN 359

Query: 363 LDES------GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
              +             P+ K++       +  R D Q GD  FF A             
Sbjct: 360 DASNINNGVEKESGLQSPIIKNMTDEVLIELIERTDAQTGDIIFFGADKAKIVNDAMGAL 419

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  I  +L +  C  +   W++DFP +E  ++  K    H+PFT P+G +E LK +   +
Sbjct: 420 RVKIGTDLNLFTCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTRPKGSVEELKQS-PET 476

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  YD+V NG EI  G +R +  ++    F  +GISKE  E +F  L  A + G PPH
Sbjct: 477 ALSIAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKEEAELKFKFLMDALRFGAPPH 536

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V   QLRELG+RI E  K
Sbjct: 537 GGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTEAPAEVDNRQLRELGIRIREKQK 596


>gi|300727957|ref|ZP_07061335.1| aspartate--tRNA ligase [Prevotella bryantii B14]
 gi|299774799|gb|EFI71413.1| aspartate--tRNA ligase [Prevotella bryantii B14]
          Length = 586

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 220/600 (36%), Positives = 350/600 (58%), Gaps = 19/600 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YR+++CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   D A  E
Sbjct: 1   MYRSNTCGELRLSDAGKNVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEADDKALCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + + G+V  R ++  N  I TG IE+ A+++++LS +   P  +  E + 
Sbjct: 61  EANKLGREFCIQVKGIVSERQSK--NNKISTGDIEIIAKELQVLSPSLTPPFTIEDETDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LD+RR+ + KN+  R R+   +R  + ++ F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDIRRNAVRKNLELRHRMTILIRNFLDSKQFMEIETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +G DRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGIDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++N  E++ R +F+E    +       ++ + +A+++YG+DKPDLR  +   
Sbjct: 238 MSFVDQDDVINLFEDMARHLFKEIRGVDIPK--MQQMTWQEAMKKYGSDKPDLRFGMEFV 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQPGLAY 358
            + +     +F VF +   +                 R   D++ ++ +SQ  G  GL Y
Sbjct: 296 ELMDVLKLGKFGVFDEAAYIGG-----ICVPGCANYTRKQLDQLTDFVKSQQVGAKGLVY 350

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADAR 417
           I +  D     +    + K     +   ++  +   +GD    ++GD P K  +     R
Sbjct: 351 IKYNEDG----SVKSSIDKFYTTDDLAKVKEAMGANNGDLVLILSGDKPNKTRTQLCSLR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +   LG+++ N F+  WI+DFP +EW++EE+++   H+PFTMP      L       +
Sbjct: 407 LEMGNRLGLMDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPEQV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD VCNG E+  G +R H +++  + F  +G + E  E +FG L  AF+ G PPH 
Sbjct: 467 RAKAYDFVCNGIEVGGGSLRIHDTKLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAPPHA 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+A G+DR V +L G  ++R+   FP + +  D+++ +PS + ++QL EL +++  + +K
Sbjct: 527 GLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLDAPSALDMKQLDELQIKVDLHQEK 586


>gi|289425292|ref|ZP_06427069.1| aspartate--tRNA ligase [Propionibacterium acnes SK187]
 gi|289154270|gb|EFD02958.1| aspartate--tRNA ligase [Propionibacterium acnes SK187]
 gi|313764303|gb|EFS35667.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313791990|gb|EFS40091.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313802060|gb|EFS43294.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313812794|gb|EFS50508.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313827646|gb|EFS65360.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|313838881|gb|EFS76595.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314915293|gb|EFS79124.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314918157|gb|EFS81988.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314920233|gb|EFS84064.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314931756|gb|EFS95587.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314958053|gb|EFT02156.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314962646|gb|EFT06746.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314967489|gb|EFT11588.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|315077862|gb|EFT49913.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|315098685|gb|EFT70661.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315101312|gb|EFT73288.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|327450631|gb|EGE97285.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327453291|gb|EGE99945.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
 gi|327454031|gb|EGF00686.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328753289|gb|EGF66905.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
 gi|328754049|gb|EGF67665.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
          Length = 606

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 226/601 (37%), Positives = 327/601 (54%), Gaps = 23/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++       +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKIIG--VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF         Y    +   G    R   D   EWAR++G  GLAYI     
Sbjct: 300 FFANTAFRVFQAP------YVGAVVMPGGASLPRRQFDAWQEWARTRGAKGLAYITI--- 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            S      GPVAK+++      I  ++  + GD+ FF AG           AR  I +  
Sbjct: 351 -SDEGVPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P ++  +E                 H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G+     
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAGVDAKPK 589

Query: 595 P 595
            
Sbjct: 590 E 590


>gi|254455582|ref|ZP_05069011.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082584|gb|EDZ60010.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 594

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 287/597 (48%), Positives = 403/597 (67%), Gaps = 5/597 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M +YRTH C +L   D+   + +SGW+++ R HG I+F+D+RD+YGITQ + + ++  F 
Sbjct: 1   MSKYRTHKCNELRKQDLDKEISISGWINKKRDHGNILFIDLRDNYGITQCIIDKENKNFL 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             +  + E V+ IDG V+ RS+ET+N +I TG IE+     E+L   +ELP+PVF ++EY
Sbjct: 61  ELEKTQLETVVKIDGKVVERSSETVNKDIETGDIEVVINNFEVLGTCKELPMPVFSDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYRFLDLRR  +H+NI+ R+++I+ +R  M +  F+E  TPILT+SSPEGARDF
Sbjct: 121 AEEIRLKYRFLDLRRKKIHENIILRSKVISFIRNEMTSAGFLEFQTPILTSSSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 LVPSRLNPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+ N +E +L   F++FS+   + + F +I Y DA+ +YG+DKPDLRNP++++
Sbjct: 241 MSFVEQEDVFNVVEKLLVNTFKKFSDKKLMYDQFPKISYADAMLKYGSDKPDLRNPLVIN 300

Query: 301 NVTEHF--VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           ++TE F      F +F K+          +         R+F D +++WA+ QG  GLAY
Sbjct: 301 DITEVFSREDVSFEIFKKLTKSGSKVRCISTKNTKDK-PRSFFDNIDKWAKEQGASGLAY 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
             +  ++ G ++  GP+ K  +      I  + + + GDS F   G   +     A AR+
Sbjct: 360 FTF--EDDGELSAKGPIGKFFSKEALLEIMKKTNSEVGDSIFMACGKLNELEKITALARD 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IAQ+L +IN N F FCWI+D+P +E +E+  KI F+HNPF+MPQG +   +  D L+I 
Sbjct: 418 KIAQDLDLINDNIFAFCWIVDYPMFERDEKTNKIGFSHNPFSMPQGDLTDKQLEDPLNIL 477

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG IRNH  E+M + FS  G  K+ V+ +F G+  A   G PPHGG
Sbjct: 478 AYQYDIVCNGIELSSGAIRNHKPELMYRLFSIAGYDKKQVDEKFSGMINALSFGAPPHGG 537

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA GIDRIVMLL   KN+REV++FPM+QN  DL+M +PS V+ EQL+EL L +    
Sbjct: 538 IAPGIDRIVMLLANEKNIREVTMFPMNQNAQDLMMKAPSEVNEEQLKELNLALKIKK 594


>gi|262202244|ref|YP_003273452.1| aspartyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262085591|gb|ACY21559.1| aspartyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 600

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 235/605 (38%), Positives = 338/605 (55%), Gaps = 28/605 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTHS G L  +D    V ++GWV R R HGG++F+D+RD  G+ QVV   D      A  
Sbjct: 3   RTHSAGSLRRADATQTVTVAGWVARRRDHGGVVFIDLRDSTGLVQVVF-RDETVAAAAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R   + N N+ +G++E++A  +E+L+ +    LP   +    E  
Sbjct: 62  LRAEFCVAVTGVVEVRPDGSENPNLASGEVEINATALEVLNESAP--LPFQLDESPGEET 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRRD     I  R+++  + R  + A +F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLRYRYLDLRRDAPSAAIRLRSKVNAAARGVLAAHDFVEIETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 180 RLQPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E V+  +++       ++    R+ Y DA+RR+G+DKPDLR  I +   TE
Sbjct: 239 DQDDVIALAEEVVAALWKLIG--VEITTPIPRMTYADAMRRFGSDKPDLRFGIELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 297 FFADTPFRVFQAP------YVGAVVMPGGASQPRRQLDAWQEWAKQRGAKGLAYVL--VG 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L+    + +   +  Q GD  FF AG      +    AR  IA  L
Sbjct: 349 EDGTLG--GPVAKNLSDAERDGLVAHVGAQPGDCVFFAAGPVKAQRALLGAARGEIASRL 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDL 474
           G+I  + + F W++D P +E  ++                 H+ FT P+        +D 
Sbjct: 407 GLIKDDEWAFTWVVDAPLFEPADDATASGDVALGTGAWTAVHHAFTAPKPESVDTLESDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A+ YD+VCNG EI  G IR H  E+  + F  +GI  +  + +FG L  AF  G P
Sbjct: 467 GAALAYAYDIVCNGNEIGGGSIRIHRREIQERVFEIMGIGHDEAQEKFGFLLDAFAFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL--RIV 592
           PHGGIA G DRIV LL G  ++REV  FP S    D L  +P+ ++ EQ +E G+  + V
Sbjct: 527 PHGGIAFGWDRIVSLLAGEPSIREVIAFPKSGGGVDPLTDAPAPITPEQRKESGIDAKPV 586

Query: 593 ENPKK 597
              KK
Sbjct: 587 VREKK 591


>gi|332978458|gb|EGK15171.1| aspartate--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 601

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 226/606 (37%), Positives = 345/606 (56%), Gaps = 14/606 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEI 61
             RT  CG +  + +   + + GW+HR R HGG+IFLD+RD  GI QVV +PD+   F  
Sbjct: 1   MKRTEYCGAVTEALLEQTITVKGWIHRRRDHGGVIFLDMRDREGILQVVIDPDTPEAFAT 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REY 120
           A + R E+VL I G V  R   T N+N+ +GQ+EL A++I +L+ +E  P P+  E    
Sbjct: 61  ADAARPEYVLEITGRVRKRYEGTENSNMTSGQVELLAKEITVLAKSETPPFPLNDENTTV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LD+RR  + + +V R +  +++R  +  + F++  TPILT ++PEGARD+
Sbjct: 121 NEDLRLKYRYLDMRRPQMQERMVFRAKATSTIRRYLDEQGFLDVETPILTRATPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G+F+ALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRTRPGNFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ +++I++  E +++ +F+   + +     F R+ Y DA+R Y +DKPDLR P+ + 
Sbjct: 240 TSFLTEEEIMSINEGLIQNLFKTMLDVDLGE--FPRMTYADAMRDYASDKPDLRIPLKLV 297

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V +     EF+VF+   +   G         GG   R   D   ++    G  GLAYI 
Sbjct: 298 DVADLMQGVEFKVFAGPANDPKGRVAALRIPNGGSLTRKQIDGYTKFVGIYGARGLAYIK 357

Query: 361 WRLDE------SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
                              P+ K+++     ++  R + QDGD  FF A           
Sbjct: 358 VNDVTNINNGVDKESGLQSPIIKNMSDDVLVSLVERTEAQDGDIIFFGADKAKIVNDAMG 417

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  I  ++ +  C  +   W++DFP +E  ++  K    H+PFTMP+G +E LK +  
Sbjct: 418 ALRVKIGLDMNMETCE-WAPLWVVDFPMFEETDD-GKWTSMHHPFTMPKGSVEELKNS-P 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  +  YD+V NG EI  G +R +  ++    F  +GIS+E    +F  L  A + G P
Sbjct: 475 ETALSIAYDMVLNGTEIGGGSLRINTVKMQRAVFDALGISEEEANEKFSFLLDALKFGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V   QLRELG+R+ E 
Sbjct: 535 PHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTQAPAEVDGRQLRELGIRVREK 594

Query: 595 PKKILK 600
            +   K
Sbjct: 595 AQAEPK 600


>gi|15903965|ref|NP_359515.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116516137|ref|YP_817329.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|32171536|sp|Q8CWN4|SYD_STRR6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|122277825|sp|Q04I59|SYD_STRP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|15459621|gb|AAL00726.1| Aspartyl-tRNA synthetase (aspartate-tRNA ligase) [Streptococcus
           pneumoniae R6]
 gi|116076713|gb|ABJ54433.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 587

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 350/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E  +   V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKDIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+ L+     +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEALA----VKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQ-EELTTALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|325286549|ref|YP_004262339.1| aspartyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324322003|gb|ADY29468.1| aspartyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 584

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 222/596 (37%), Positives = 339/596 (56%), Gaps = 15/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACF 59
            YR+H+CG+L  + + + V LSGWV + R  G I+++D+RD YG+TQ+V + +       
Sbjct: 1   MYRSHNCGELNATHINTEVTLSGWVQKSRDKGFIVWVDLRDRYGVTQLVFDEERTSKEMM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A+ +  E+V+ + G V+ R+++  N N+ TG+IE+   ++ IL+ A   P  +  E +
Sbjct: 61  ERAQKLGREFVIQVKGKVIERASK--NPNMPTGEIEILVSELTILNKAIVPPFTIEDETD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR+ +  N++ R+++   +R  +    FIE  TP L  S+PEGARD
Sbjct: 119 GGEDLRMKYRYLDIRRNPVKNNLIFRSKVSMEVRNFLSNNGFIEVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGEFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DILN  EN+ R + +E +        F R+ +DDA+R YG DKPD+R  +  
Sbjct: 238 EMAFVEQEDILNIFENLTRHLLKEINGVEVDK--FPRMLFDDAMRLYGNDKPDIRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             + +   H +F VF+    V            G    R   D++ +W +      L  +
Sbjct: 296 GELNDIAQHKDFGVFNNAELVVG-----IAVPGGNAYTRKEIDKLIDWVKRPQVGALGMV 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R ++ G  +    V K  +  +      R   + GD    ++G   K  +  +  R  
Sbjct: 351 YSRCNDDG--SFKSSVDKFYDQEDLAKWAERTGAKPGDLVCVLSGPANKVRAQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ LG+   N F   W++DFP  E +EE       H+PFT P+ G   L   D  ++KA
Sbjct: 409 LAERLGLRKPNEFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDTDPGAVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H  E     F ++G + E  + +FG L  AFQ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKETQATMFKHLGFTPEEAKEQFGFLMDAFQYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR+V +L G + +R+   FP + +  D+++ +P+ +  EQL+EL L++  N 
Sbjct: 529 AFGLDRLVSILGGQETIRDFIAFPKNNSGRDVMIDAPAAIDDEQLKELSLQVTVNK 584


>gi|19552847|ref|NP_600849.1| aspartyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62390518|ref|YP_225920.1| aspartyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|24212396|sp|Q8NQ19|SYD_CORGL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|21324404|dbj|BAB99028.1| Aspartyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41325855|emb|CAF21644.1| PROBABLE ASPARTYL-TRNA SYNTHETASE PROTEIN [Corynebacterium
           glutamicum ATCC 13032]
          Length = 608

 Score =  605 bits (1559), Expect = e-171,   Method: Composition-based stats.
 Identities = 240/605 (39%), Positives = 331/605 (54%), Gaps = 27/605 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L   + G  V L+GWV+R R HGG+IF+D+RD  GI QVV   +    E A +
Sbjct: 3   RTHLSGELRKENAGQSVTLTGWVNRRRDHGGVIFIDLRDRTGIAQVVFRNEDVA-ERAHA 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYP 121
           +RSE+VL + G+V  R   + N N+ +G IE+S  + E+L+ +  LP  +       E  
Sbjct: 62  LRSEFVLRVTGVVEERPEGSQNPNLASGDIEVSVTEFEVLNESAPLPFQIEDSSSAGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR      +  R+    + R  + + +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRPVQANALRLRSAANKAARTVLDSHDFTEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G+FYALPQ+PQ +KQLL  +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLRPGTFYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E ++  V++       +     R+ Y DA+RRYG+DKPDLR  I +  
Sbjct: 241 SFVDQDDVIALGEEIISEVWKLIG--YEIKTPIPRMTYADAMRRYGSDKPDLRFDIEITE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAYI  
Sbjct: 299 CTEFFQDTTFRVFKN------EYVGAVVMTGGASQPRRQLDAWQEWAKQRGAKGLAYIL- 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G ++  GPVAK++       I   +  Q GD  FF AGD     +    AR  IA
Sbjct: 352 -VGEDGELS--GPVAKNITDAERAGIAAHVGAQPGDCIFFAAGDTKSSLALLGAARGEIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKG 471
           ++L +I    + F WI+D P +E   +            K    H+ FT P+        
Sbjct: 409 KKLDLIKEGDWAFTWIVDAPMFEPAADATASGDVALGNSKWTAVHHAFTSPKPEFLDNFD 468

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            +     A+ YD+VCNG EI  G IR H  +V  + F  +GI+ E    +FG L  AF  
Sbjct: 469 TNPGDALAYAYDIVCNGNEIGGGSIRIHQRDVQERVFEVMGITGEEAREKFGFLLDAFAF 528

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ ++ +Q +E G+  
Sbjct: 529 GAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGIDPLTDAPAAITPQQRKEAGIDA 588

Query: 592 VENPK 596
              PK
Sbjct: 589 KPKPK 593


>gi|315444699|ref|YP_004077578.1| aspartyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|315263002|gb|ADT99743.1| aspartyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 590

 Score =  605 bits (1559), Expect = e-171,   Method: Composition-based stats.
 Identities = 240/599 (40%), Positives = 334/599 (55%), Gaps = 26/599 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT + G L  +D G  V L+GWV R R HGG+IF+D+RD  G++QVV   D A  E A  
Sbjct: 3   RTRTAGSLRPADAGQTVTLAGWVARRRDHGGVIFIDLRDASGVSQVVF-RDGAVLEQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + + G+V  R     NA+I TG++E++A  + +L  +    LP   +    E  
Sbjct: 62  LRSEFCVAVTGVVEIRPEGNANADIPTGEVEVNATSLTVLGES--AALPFQLDETAGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+     I  R+++  + R  + A +F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRREVPGNAIRLRSKVNAAARGVLAAHDFVEIETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + DD++   E VLR V+        +     RI Y DA+RR+G+DKPDLR  + +   TE
Sbjct: 239 DADDVMAVSEEVLRAVWATIG--YDLPLPLPRISYADAMRRFGSDKPDLRFGLELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   E+A+ +G  GLAY+   + 
Sbjct: 297 YFADTPFRVFQAP------YVGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVL--VG 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L       +   +    GD  FF AG      +     R  +A+ L
Sbjct: 349 EDGELT--GPVAKNLTDAERAGLTAHVGANPGDCVFFAAGTAKSARALLGATRIEVAKRL 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
            +I+ + + F W++D+P +E   E                 H+ FT P    E+    D 
Sbjct: 407 DLIDPDAWAFTWVVDWPMFESAAEATASGDVAVGSGAWTAMHHAFTAPTPESEATFDTDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  +  YD+VCNG EI  G +R H  +V  + F+ +GISKE  E++FG L  AF  G P
Sbjct: 467 GSALSNAYDIVCNGNEIGGGSLRIHRRDVQERVFAMMGISKEEAEDKFGFLLEAFTFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PHGGIA G DRIV LL G  ++REV  FP S    D L  +P+ ++ +Q +E G+    
Sbjct: 527 PHGGIAFGWDRIVALLAGLDSIREVIAFPKSGGGVDPLTEAPAPITAQQRKESGIDAKP 585


>gi|306828557|ref|ZP_07461752.1| aspartate--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304429356|gb|EFM32441.1| aspartate--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 587

 Score =  605 bits (1559), Expect = e-171,   Method: Composition-based stats.
 Identities = 232/596 (38%), Positives = 345/596 (57%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL    + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELDVTALTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V  E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMRETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T      +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTAVVKDVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQAE-LTNALGLEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDSDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFQALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|288817673|ref|YP_003432020.1| aspartyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787072|dbj|BAI68819.1| aspartyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751271|gb|ADO44754.1| aspartyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 596

 Score =  605 bits (1559), Expect = e-171,   Method: Composition-based stats.
 Identities = 238/602 (39%), Positives = 348/602 (57%), Gaps = 23/602 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +   D+G  + L GWVHR+R HGG+IF+D+RD  GI QVV         +EI
Sbjct: 3   KRTKYCGQVSEEDIGKELILCGWVHRIRNHGGVIFIDLRDREGIMQVVVEERTSPKAYEI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+ SE+V+ + G V  R   T N  + TG  EL AQ+IE+L+ +E LP PV  E    
Sbjct: 63  ADSLSSEYVIAVKGSVRRRPPGTENPKLKTGYYELLAQEIEVLNTSEPLPFPVDEETPVS 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E ++ +YR++DLRR+++ ++I+ R +    +R   I   F+E  TP LT S+PEGARDFL
Sbjct: 123 EELKLRYRYIDLRRESMKESILFRHKAYQIIREVFIKHGFVEIETPFLTKSTPEGARDFL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ G FYALPQ+PQ +KQ+LM +GFDRYFQI  C RDED R+DR P EF Q+D EM
Sbjct: 183 VPSRLHPGKFYALPQSPQLFKQILMVAGFDRYFQIVKCLRDEDLRADRQP-EFTQIDFEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE++D+++  E ++  +F E      +   F R+ Y D + RYGTDKPD R  I + +
Sbjct: 242 SFVEEEDVISFSEELICKLFRELLGIE-LKRPFDRMSYKDVLERYGTDKPDRRFGIELVD 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++  F ++EF+VF   L      +  AI  K    +R   D + ++ ++ G  GLA+I  
Sbjct: 301 LSNIFKNTEFKVFKDALQSGGSVK--AINFKNSHLSRKEIDELTKFVQTLGARGLAWIKV 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E G +    P+ K L+    + +  +    +GD+ FF A             R HIA
Sbjct: 359 ---EDGKL--NSPITKFLSDEEIKNLLEKTSANEGDTIFFSADKQDMAYKILGSLRLHIA 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS----- 476
           ++  ++  N F+  W++DFP  EW+EEE +    H+PFT P+     L    L S     
Sbjct: 414 KKYQLLRDNTFDLLWVVDFPLMEWDEEEGRFVSLHHPFTSPKEEDLPLLEEALKSQDLEE 473

Query: 477 -------IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
                  ++A  YDLV NG+E+  G IR H  EV    F  +GIS+   E +FG L RA 
Sbjct: 474 KKQLLKRVRARAYDLVINGYEVGGGSIRIHRREVQELVFKLLGISEVEAEEKFGFLLRAL 533

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGG+A G+DR++ L+ G  ++R+V  FP +Q     L G+P  VS +QL+++ +
Sbjct: 534 RYGAPPHGGLAFGLDRLIALMRGLDSIRDVIAFPKTQKGICPLTGAPDYVSPKQLKDVHI 593

Query: 590 RI 591
           ++
Sbjct: 594 KL 595


>gi|326559889|gb|EGE10289.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 598

 Score =  605 bits (1559), Expect = e-171,   Method: Composition-based stats.
 Identities = 228/600 (38%), Positives = 340/600 (56%), Gaps = 14/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  CG +    +   + ++GWVHR R HGG+IFLD+RD  G+ QVV +PD+   F  A 
Sbjct: 3   RSTYCGQVTEELIDQTITIAGWVHRRRDHGGVIFLDMRDREGLLQVVIDPDTPEAFATAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPE 122
           + RSE++L I G V  R   T N N+++GQ+EL  ++IE+L+ ++  P P         E
Sbjct: 63  AARSEYLLKITGRVRRRYEGTENPNMVSGQVELLGKEIELLAKSDTPPFPLNDDNITVSE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLD+RR  + + +  R +  +++R  +    F++  TP+LT ++PEGARD+LV
Sbjct: 123 ELRLKYRFLDMRRPEMQERMKFRAKATSTIRRYLDDYGFLDVETPVLTRATPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  QG+F+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E S
Sbjct: 183 PSRTRQGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I++  E + + +F+   +    +  F R+ Y DA+R Y +DKPDLR P+ + +V
Sbjct: 242 FLSDEEIMDITEGLTKNLFKTMLDVEFDT--FPRMTYADAMRDYASDKPDLRIPLKLIDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +   H EF+VFS       G  V      GG  +R   D   ++    G  GLAYI   
Sbjct: 300 ADIMQHVEFKVFSGPAQDPKGRVVALRIPNGGNMSRKQIDEYTKFVGIYGARGLAYIKVN 359

Query: 363 LDES------GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
              +             P+ K++       +  R D Q GD  FF A             
Sbjct: 360 DASNINNGVEKESGLQSPIIKNMTDEVLIELIERTDAQTGDIIFFGADKAKIVNDAMGAL 419

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  I  +L +  C  +   W++DFP +E  ++  K    H+PFT P+G +E LK +   +
Sbjct: 420 RVKIGTDLNLFTCE-WAPLWVVDFPMFEETDD-GKWTSVHHPFTRPKGSVEELKQS-PET 476

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  YD+V NG EI  G +R +  ++    F  +GISKE  E +F  L  A + G PPH
Sbjct: 477 ALSIAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKEEAELKFKFLMDALRFGAPPH 536

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR++ML++GA ++R+V  FP ++     L  +P+ V   QLRELG+RI E  K
Sbjct: 537 GGLAFGLDRLIMLMVGASSIRDVIAFPKTKTADCPLTEAPAEVDNRQLRELGIRIREKQK 596


>gi|168494130|ref|ZP_02718273.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183575842|gb|EDT96370.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 587

 Score =  605 bits (1559), Expect = e-171,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 348/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEKEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQ-EELTTALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|332876626|ref|ZP_08444386.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332685459|gb|EGJ58296.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 582

 Score =  605 bits (1559), Expect = e-171,   Method: Composition-based stats.
 Identities = 223/595 (37%), Positives = 335/595 (56%), Gaps = 19/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACF 59
            YRTH+CG+L +S     V LSGWV RVR  G +I++D+RD YGITQ++ +    D A F
Sbjct: 1   MYRTHTCGELRLSHENQQVTLSGWVQRVRNKGFMIWVDLRDRYGITQLIFDEERTDKAVF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E AK++  E V+ I G V+ R A   N NI TG++E+    + +L+ +E  P  +    +
Sbjct: 61  EKAKTLSREDVIQIQGTVIKREAA--NTNIPTGEVEILVTALTLLNHSELPPFTIEDNTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR  +  N++ R ++   +R  +  + FIE  TP+L  S+PEGARD
Sbjct: 119 GGEDLRMKYRYLDIRRTPVRDNLIFRHKVGIMVRNYLSEQGFIEVETPVLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNPGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVEQ+DI+ T E + + + +E       +  F R+ Y +A++ YG DKPD+R  +  
Sbjct: 238 EMSFVEQEDIIQTFEGLAKHLLKELKGLEFGA--FPRMTYAEAMKTYGNDKPDIRFGMKF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             + +   H +F+VF++   V                 R   D + EW +    G  G+ 
Sbjct: 296 GELNDLAQHRDFKVFNEAELVVG-----IAVPGANSYTRKEIDALVEWVKRPQVGASGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+    D          V K  N  + +A   R   Q GD    ++G   K     +  R
Sbjct: 351 YVKCNEDG----TFKSSVDKFYNEDDLKAWAERTGAQAGDLICILSGKANKVRGQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ LG+   + +   W++DFP  EW+EEE++    H+PFT P+     L  ++  ++
Sbjct: 407 MELAERLGLRKPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDSNPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG E+  G IR    E+  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 467 RANAYDLVLNGNEVGGGSIRIFNQELQAKMFELLGFTPEQAQAQFGFLMNAFRYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+A G DR+V LL G + +R+   FP + +  D+++ +PS +   QL+EL +++ 
Sbjct: 527 GLAFGFDRLVALLGGQETIRDFIAFPKNNSGRDVMIDAPSPIDDAQLKELSIQLA 581


>gi|300784607|ref|YP_003764898.1| aspartyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299794121|gb|ADJ44496.1| aspartyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 591

 Score =  605 bits (1559), Expect = e-171,   Method: Composition-based stats.
 Identities = 239/597 (40%), Positives = 337/597 (56%), Gaps = 22/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G L     G  V L+GWV R R HGG+IF+D+RD  G+ QVV        E A +
Sbjct: 3   RTHNAGTLRAGQAGQTVTLTGWVARRRDHGGVIFIDLRDASGVAQVVFREGEMA-ERAHA 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + I G V  R     NA I TG+IE+ A ++E+LS A  LP P+    +  E I
Sbjct: 62  LRSEFCVKIVGEVAKRPEGNANAEIPTGEIEVLATQLEVLSEAAPLPFPIDDRVDVGEEI 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R K+R+LDLRR      +  R+ +  + R  + A++F+E  TP +T S+PEGARDFLVP+
Sbjct: 122 RLKHRYLDLRRSGPAAAMRLRSEVSRAAREVLHAQDFVEIETPTMTRSTPEGARDFLVPA 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 182 RLKPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E+++  +++     + +     RI Y +A+ +YG+DKPDLR  + + ++TE
Sbjct: 241 EQDDVIALGEDIVSALWKLIG--HEIPRPIPRITYHEAMAKYGSDKPDLRFDLEITDMTE 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    + A G    R   D   EWA+ +G  GLAYI   +D
Sbjct: 299 FFADTPFRVFQAP------YVGAVVMAGGADQPRRQLDAWQEWAKQRGARGLAYILVNVD 352

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
             G +   GPVAK+L+    E +      + GD  FF AG           AR+ I + L
Sbjct: 353 --GTLG--GPVAKNLSETERENVAAAAGAKPGDCIFFAAGKAASTQPLLGAARDEIGKRL 408

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE--------EKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           G+I+ N + F W++D P +   E+          K    H+ FT P          D  +
Sbjct: 409 GLIDENAWSFVWVVDAPLFAPVEDIGDDVAVGSGKWTAVHHAFTSPTPEWIDKFEQDPGN 468

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A+ YD+VCNG EI  G IR H  +V  + FS +G+ +E  + +FG L  AF  G PPH
Sbjct: 469 ALAYAYDIVCNGNEIGGGSIRIHRGDVQKRVFSLMGLGEEEAQEKFGFLLDAFAFGPPPH 528

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GGIA G DRIVMLL  A ++R+V  FP +    D L  +P+ ++ +Q +E G+    
Sbjct: 529 GGIAFGWDRIVMLLAKADSLRDVIAFPKTGGGYDPLTAAPAPITAQQRKEAGIDAKP 585


>gi|289549034|ref|YP_003474022.1| aspartyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182651|gb|ADC89895.1| aspartyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 597

 Score =  605 bits (1559), Expect = e-171,   Method: Composition-based stats.
 Identities = 235/602 (39%), Positives = 351/602 (58%), Gaps = 23/602 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
             RT  CG++G  D+G  V L GWVHRVR HGG+IF+D+RD  G+ QVV     +   + 
Sbjct: 1   MKRTKYCGEIGEEDLGREVVLCGWVHRVRNHGGVIFIDLRDREGLVQVVVEESVNPEAYN 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  +RSE+V+C+ G+V  R   T N  + TG  E+   +IE+L+  E LP PV  E   
Sbjct: 61  VADQLRSEYVVCVKGVVRKRPPGTENPKLKTGMYEVVGYEIEVLNTCEPLPFPVEEETPV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR+++ +NI+ R R    +R  ++ + F+E  TP LT S+PEGARDF
Sbjct: 121 SEELRLKYRFLDLRRESMKENILFRHRSYQIIRRTLVEKGFVEVETPFLTKSTPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQ+PQ +KQ+LM +G D+YFQI  C RDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRLHPGKFYALPQSPQLFKQVLMVAGIDKYFQIVKCLRDEDLRADRQP-EFTQVDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+++D++   E ++  +F+E    + +   F RI Y + + RYGTDKPD R  + + 
Sbjct: 240 MSFVDEEDVIQISEELVSNLFKELLGID-LKRPFDRISYAEVMERYGTDKPDRRFGLELV 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++    + F VF  +L      +   +  KG   +R   D + + A+  G  GLA+I 
Sbjct: 299 DVSQELKETHFMVFRSVLETGGVVK--GMNLKGLSLSRRELDDLTKKAQELGARGLAWIK 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               E G +  + P+ K L    T A+  ++  ++GD+    A          +  R  I
Sbjct: 357 L---EKGKL--VSPITKFLTEGETNALLEKMGAEEGDTIVLCADSRDVVNKVLSSLRLQI 411

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-----ESLKGNDLL 475
           A++ G+I+   ++  W++DFP  EW++EE +    H+PFT P+        E+L+  D  
Sbjct: 412 AKQYGLIDEEKWDILWVVDFPLLEWDQEEGRFVSVHHPFTAPRQEDIPKLEEALRAEDPK 471

Query: 476 -------SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
                  S+KA  YDLV NG E+  G +R H  ++    F  + IS++  E +FG L RA
Sbjct: 472 DKIKLVSSVKARAYDLVINGEEVGGGSVRIHDPKLQKMIFDLLNISQQEAEEKFGFLLRA 531

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
            + G PPH GIA G+DR++ ++ G  ++R+V  FP +Q     L G+P  VS +QLREL 
Sbjct: 532 LRYGAPPHAGIAFGLDRLLAIMRGLDSIRDVIAFPKTQKGVCPLTGAPDYVSPKQLRELH 591

Query: 589 LR 590
           +R
Sbjct: 592 IR 593


>gi|270308031|ref|YP_003330089.1| aspartyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153923|gb|ACZ61761.1| aspartyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 598

 Score =  605 bits (1559), Expect = e-171,   Method: Composition-based stats.
 Identities = 246/600 (41%), Positives = 359/600 (59%), Gaps = 12/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           +THSC  L   ++G+ V L+GWVHR R HGG+IF+D+RD  GI QVV NP+ +  C +I 
Sbjct: 3   KTHSCA-LTQENIGTEVTLAGWVHRRRDHGGVIFIDLRDREGIVQVVFNPEQSTGCLDIG 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +RSE+VL + G+V  R A T N+ + +G +E+ A   +IL+ A+  P  +  E E  E
Sbjct: 62  KELRSEYVLQVKGVVSRRPAGTENSRMPSGLVEVVAADAKILNAAKTPPFYINEEVEVDE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LD+RR  +  N++ R + ++ MR  +    FIE  TPIL  S+PEGARD+LV
Sbjct: 122 SLRLKYRYLDIRRQGMKNNLIIRHKAVSFMREFLNTRGFIEIETPILIKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQQ KQLLM +G ++Y+Q+A CFRDED R+DR P EF QLDMEMS
Sbjct: 182 PSRLFPGQFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQP-EFTQLDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++D++  ME++  G+          +  F RI + DA+ +YG DKPDLR  + + ++
Sbjct: 241 FVDENDMMQLMEDLFTGLVASVRPDMKYNKKFPRISFADAMEKYGCDKPDLRFGMELADI 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+    S F VF  + +     +  + P  GG  N++  + +   A+  G  G   I   
Sbjct: 301 TDIGASSAFGVFKNVAAQGGAIKAISAPGCGG-YNKSQQEELINLAKKYGAAGSVPISLS 359

Query: 363 LDESGNVAGM------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
             ESG +  +         AK+L +   + I  R   + GD    +AG      S   + 
Sbjct: 360 A-ESGELKDLTMEMVKSVAAKYLTLEEIKTIAERSGAKSGDLILIVAGARKMVNSVLGEM 418

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           RNH+A +LG+ + N   F +++DFP ++W+EE K+ D  H+PFT P      L   D   
Sbjct: 419 RNHLAAKLGLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLEADMPLMDTDPAK 478

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + +  YD+VCNG+EIA G IR H +++  + F  +G + E +  RFG L  AF+ G PPH
Sbjct: 479 VGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFHLLGYNDEQINERFGHLLEAFEFGAPPH 538

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A GIDR VMLL G  ++REV  FP +Q   DLL G+PS V  +Q+R+L +RI    +
Sbjct: 539 GGVAPGIDRFVMLLAGETSIREVIPFPKNQAAQDLLFGAPSVVDDKQIRDLHIRIQAEKE 598


>gi|257457749|ref|ZP_05622910.1| aspartyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257444799|gb|EEV19881.1| aspartyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 599

 Score =  605 bits (1559), Expect = e-170,   Method: Composition-based stats.
 Identities = 242/596 (40%), Positives = 348/596 (58%), Gaps = 11/596 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           +   RT +CG L  SD G  V L+GWVHR R HGGI F+++RD YG+TQVV + D++   
Sbjct: 12  IEMKRTVTCGQLQKSDAGKTVVLNGWVHRKRDHGGISFINLRDRYGLTQVVVDDDASPEL 71

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E A  ++ E+ + ++G V  R    +N  + TG IE+ AQ+I +LS +  LP  +  + 
Sbjct: 72  KETAAGLKMEYCIAVEGTVRLRPDSMVNTEMSTGYIEVKAQRIMVLSKSAVLPFQIDEKT 131

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R KYR+LDLR  T+  +++ R+++  ++R  +  +NF+E  TP    S+PEGAR
Sbjct: 132 NANEDLRLKYRYLDLRSQTMQDHLILRSKVTFAVREYLTGKNFLEIETPTFIKSTPEGAR 191

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR+  G FYALPQ+PQ YKQ+LM SGFDRYFQIA C+RDED R DR P EF Q+D
Sbjct: 192 DYLVPSRLYPGKFYALPQSPQLYKQILMVSGFDRYFQIARCYRDEDARGDRQP-EFTQID 250

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV +DD+LN  E++ R VF++    +   + F RI YDDAI  YGTDKPD+R  + 
Sbjct: 251 IEMSFVSRDDVLNVTEDMFRTVFKKTIGADLAQS-FPRISYDDAIDLYGTDKPDIRFEMK 309

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +       ++F VF   L+     +   +  + G  +R   + +   A+     GLA+
Sbjct: 310 LQDAAWMAECADFAVFKDALAAGGAVKALTVKGQAGSYSRKKIEELEATAKIYKAKGLAW 369

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADAR 417
                      A  G +AK+      E I  +L+ QDGD   F+        C+     R
Sbjct: 370 TKV-----AGGAFEGGIAKYCAGAEAE-ICKKLNAQDGDLLLFVADAKYKTACTALGAVR 423

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           + + ++L +++   F F W++DFP +EWNE+E+K D AH+ F+ PQ         +   +
Sbjct: 424 SKLGKDLNLLDPKVFAFLWVIDFPLFEWNEDEQKWDPAHHMFSAPQERYLDTLEQNPGEV 483

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K   YDLV NG+E+ASG IR H  E+  + FS VG +    E +FG L  AF+ G PPHG
Sbjct: 484 KGDLYDLVLNGYEVASGSIRIHNPELQKRIFSIVGFNPADAEKKFGFLTEAFKYGAPPHG 543

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIA G+DRIVML+ G  +++EV  FP +      +  SPS V  +QL EL L I E
Sbjct: 544 GIAPGLDRIVMLMAGETSIKEVIAFPKNTFAVSPMDESPSEVDEKQLAELHLSIRE 599


>gi|256819652|ref|YP_003140931.1| aspartyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581235|gb|ACU92370.1| aspartyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 582

 Score =  605 bits (1559), Expect = e-170,   Method: Composition-based stats.
 Identities = 222/595 (37%), Positives = 340/595 (57%), Gaps = 19/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACF 59
            YRTH+CG+L +S     V LSGWV R+R  G +I++D+RD YGITQ++ +    D   F
Sbjct: 1   MYRTHTCGELRLSHEKQQVTLSGWVQRIRNKGFMIWVDLRDRYGITQLIFDEERTDKTVF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E AK++  E V+ I G+V+ R A   NANI TG++E+    + +L+ +E  P  +    +
Sbjct: 61  EQAKTLSREDVIQIQGIVIKREAA--NANIPTGEVEILVTALTLLNHSELPPFTIEDNTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR  +  N++ R ++   +R  +  + FIE  TP+L  S+PEGARD
Sbjct: 119 GGEDLRMKYRYLDIRRTPVRDNLIFRHKVGIMVRNYLSGQGFIEVETPVLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNPGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVEQ+D+++T E + + + +E    +  +  F R+ Y +A++ YG DKPD+R  +  
Sbjct: 238 EMSFVEQEDVISTFEGLAKHLLKELKGLDFGA--FPRMTYAEAMKTYGNDKPDIRFGMKF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             + +   H +F+VF++   V                 R   D + EW +    G  G+ 
Sbjct: 296 GELNDLAQHRDFKVFNEAELVVG-----IAVPGANSYTRKEIDALVEWVKRPQVGASGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+    D     +    V K  N  + +A   R   + GD    ++G   K     +  R
Sbjct: 351 YVKCNEDG----SFKSSVDKFYNEDDLKAWAERTGAKAGDLICILSGKANKVRGQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ LG+ N + +   W++DFP  EW+EEE++    H+PFT P+     L  ++   +
Sbjct: 407 MELAERLGLRNPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDSNPGEV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG E+  G IR    E+  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 467 RANAYDLVLNGNEVGGGSIRIFNQELQAKMFQLLGFTPEQAQAQFGFLMNAFKYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+A G DR+V LL G + +R+   FP + +  D+++ +PS +   QL+EL +++V
Sbjct: 527 GLAFGFDRLVALLGGQETIRDFIAFPKNNSGRDVMIDAPSPIDEAQLKELSIQLV 581


>gi|124515285|gb|EAY56795.1| Aspartyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 584

 Score =  605 bits (1559), Expect = e-170,   Method: Composition-based stats.
 Identities = 238/590 (40%), Positives = 333/590 (56%), Gaps = 10/590 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
            YR+HS  DL     GS V L+GWV  VR HGG++F D+RD  G+ QVV NPD       
Sbjct: 1   MYRSHSTTDLTTLPTGSLVTLAGWVQTVRDHGGLLFFDLRDREGLVQVVVNPDTTPQLAS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +AKS+R EWV+ + G +  R   T N  + TG +E+  Q++ +L+     P P+    E 
Sbjct: 61  LAKSLRDEWVISLHGKIQVRPEGTHNPALPTGSLEVICQEMHVLNTCPTPPFPIDDRIEV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E++R  YR+LD+RR+TL K++  R  + + +R  +    F E  TPILT S+PEGARDF
Sbjct: 121 SETLRLTYRYLDIRRETLRKSLKLRNDLTHFIRNYLHDHAFWEVETPILTRSTPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+ +GSFYALPQ+PQ +KQ+LM  G +RY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRLEKGSFYALPQSPQLFKQILMVGGIERYYQIARCFRDEDLRADRQP-EFTQVDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  D  L  ME +++ +FE+F+        F+R+ Y +A+ +YG+DKPDLR  + + 
Sbjct: 240 ASFLTMDQFLYLMEGMIQSIFEKFTGF-RPDRPFVRLTYHEAMEKYGSDKPDLRFGLPIG 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           N++E    ++FRVF  +L           P  G   +R   D + +W   QG  GLA+  
Sbjct: 299 NLSEAAGKTQFRVFLDVLDQKGVVLGLRYP-GGAALSRKEIDELTQWTVDQGAKGLAWFK 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                        P+ K         I   L  + GD   FIA         A   R HI
Sbjct: 358 VE-----GETFQSPILKFFPEEAQADIAKVLSPEPGDMLLFIADKGPLARKIAGQLRLHI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
              L +     +   W++DFP +EWNEEE +++  H+PFT P+     L  +D LS+++ 
Sbjct: 413 GDRLKLRRPQDYSLLWVVDFPLFEWNEEENRLEALHHPFTAPRREDIPLLESDPLSVRSD 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG EI  G +RN    +  + F  +GIS E    RFG L  A   G PPH G+A
Sbjct: 473 AYDLVLNGTEIGGGSVRNFEPHLQERLFEKIGISPESARARFGFLLDALTYGAPPHLGMA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G+DR VMLL G  ++R+V  FP +Q    LL  +PS+V   QL+ELG+R
Sbjct: 533 FGLDRFVMLLAGCDSIRDVIAFPKTQKGSCLLTEAPSSVDAVQLKELGIR 582


>gi|313897477|ref|ZP_07831020.1| aspartate--tRNA ligase [Clostridium sp. HGF2]
 gi|312957847|gb|EFR39472.1| aspartate--tRNA ligase [Clostridium sp. HGF2]
          Length = 581

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 219/591 (37%), Positives = 341/591 (57%), Gaps = 12/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L + D G  V L GWV + R  G ++F+D+RD  GITQ+V   D    E  + 
Sbjct: 3   RTHTNGELRLCDAGKEVTLIGWVAKRRNFGSLVFIDLRDRTGITQLVF--DEQLSEQIRD 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E++L   G VM R  +  N  + TG+IE+  + + I++ AE  P+ V  E +  E  
Sbjct: 61  VRNEYILEATGCVMERKDK--NPKLPTGEIEIQVRAVTIINRAETTPIIVADETDALEDT 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  + + ++ R RI +SMR  + ++ FIE  TP+L  S+PEGARD+LVPS
Sbjct: 119 RLKYRYLDLRRPVMQQKLMLRHRITHSMREYLDSKEFIEIETPMLGRSTPEGARDYLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ GSFYALPQ+PQ YKQLLM SGF+RY+Q A CFRDED R+DR   +F Q+D+E SF+
Sbjct: 179 RVHPGSFYALPQSPQLYKQLLMVSGFERYYQFARCFRDEDLRADRQ-TDFTQVDLETSFL 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              +I   ME +L+ + ++    +  S  F R+ + +A+ RYG+DKPD R  + +  +TE
Sbjct: 238 SDVEIQTMMEEMLQKLMKDVKGMDI-SIPFPRLTWTEAMNRYGSDKPDNRFGMELQEITE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F +  F+VF+  ++     +   +P K G   R   D++ E A+  G  GL  + ++ +
Sbjct: 297 LFENCGFKVFADCIADKGSIKAVVVPGKAG-MTRKEIDKITELAKKNGAKGLVTLKYKDE 355

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E       GP+ K L     +A+ +RL +++ D    ++      C      RNH   EL
Sbjct: 356 E-----LSGPIVKFLAEEEIQALVMRLSLKNEDLVLIVSDAWRTTCEVLGVLRNHFGAEL 410

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G+   + F + W+ DFP +E++EE+ +    H+PFT P+        +D   + A  YD+
Sbjct: 411 GLKKSDEFSYLWVTDFPMFEYSEEDGRWYAMHHPFTRPRDEDMQYIDSDPGKVHAIAYDV 470

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG+E+  G +R +   +  + F  +G ++E ++  FG    A + G PPHGG+A G+D
Sbjct: 471 VLNGYELGGGSLRIYDGAMQDKMFEVLGFTEEKIQENFGWFVDALKYGTPPHGGLAFGLD 530

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           RI M+L  ++++R+V  FP + N    +  +P+ V   QL EL + + E  
Sbjct: 531 RIAMILSESESIRDVIAFPKNANAKCPMSDAPTPVDAAQLEELHIALTEEE 581


>gi|166031158|ref|ZP_02233987.1| hypothetical protein DORFOR_00844 [Dorea formicigenerans ATCC
           27755]
 gi|166029005|gb|EDR47762.1| hypothetical protein DORFOR_00844 [Dorea formicigenerans ATCC
           27755]
          Length = 596

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 232/596 (38%), Positives = 346/596 (58%), Gaps = 11/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFE 60
            RTH CG+L  ++VG    + GWV + R  GG++F+D+RD  GI QVV +    D+A  E
Sbjct: 9   KRTHRCGELSAANVGETATIMGWVQKNRNKGGLVFVDVRDRSGIIQVVFDEGSVDAALIE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ + G V  RS   +N NI TG+IE+  +++ +LS +E  P  +    + 
Sbjct: 69  KAAKLRSEYVVAVVGKVAKRSG-AVNENIATGEIEIIPEELRVLSESETPPFQIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + +N++ R+++    R  M  E F+E  TP+L  S+PEGARD+
Sbjct: 128 KEEVRLKYRYLDLRRPDMQRNLMMRSKVATLARQFMANEGFLEIETPVLIGSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QG FYALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHQGHFYALPQSPQLFKQLLMCSGYDRYFQIAKCFRDEDLRADRQP-EFTQMDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E  L  +F+E      V     R+ + +A+ RYG+DKPD R  + + 
Sbjct: 247 LSFVDVDDVIDVNERFLAMLFKEVLGVE-VPLPIPRMTWQEAMDRYGSDKPDTRFGMELV 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NVT+    SEF VF   +             +GG   R   D++ ++A+  G  GLAYI 
Sbjct: 306 NVTDVVKDSEFVVFKGAIENGGTVRGINAKGQGG-MARKKIDKLVDYAKDYGAKGLAYIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               E G V      AK +     + +   +D ++GD   F A             R  +
Sbjct: 365 IH--EDGTVK--SSFAKFMTEDEQKNLIQAMDGENGDLLLFAADKNKVVWDVLGALRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++ +++ N ++F WI +FP  EW+EE+ +    H+PFTMP         +D   ++A 
Sbjct: 421 ARQMDLLDKNEYKFMWITEFPLLEWSEEQNRFTAMHHPFTMPMEEDLQYIDSDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+  NG EI  G +R    E+  + F  +G + E  + +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDITLNGNEIGGGSVRIFNPEIQSKMFEVLGFTPEQAQEQFGFLLTAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VML+    ++R+V  FP  ++  DL+  +P+ V  +QL ELGL +V   +
Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASDLMTEAPTKVDQKQLDELGLEVVAEEE 596


>gi|253756534|ref|YP_003029674.1| aspartyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251818998|emb|CAZ56845.1| aspartyl-tRNA synthetase [Streptococcus suis BM407]
          Length = 583

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 235/593 (39%), Positives = 346/593 (58%), Gaps = 17/593 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  + L GWV R R  GG+IF+D+RD  GI Q+V NP+S   E+ 
Sbjct: 1   MKRSMYAGRVRKEHVGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPESVEAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V+ R  E  N NI TG +EL    + +L+ A+  P  +    E
Sbjct: 61  AKAESLRSEFVIEVTGTVVER--EQANDNIPTGAVELQVTSLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  +  N   R  + +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 ASDDTRLRYRYLDLRRPEMLNNFKLRAAVTHSIRNYLDDLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV++G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V ++    + V+  F R+ YD A+  YG+DKPD R  +++
Sbjct: 238 ETSFLNEVEIQDIVEGLIAKVLKDTKGID-VTLPFPRMAYDHAMNFYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ ++A+  G  GLA++
Sbjct: 297 QDLTELVKEVDFKVFSEA----PVVKAIVVKGAADSYSRKDIDKLTDYAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                + G +A  GPVAK L  + TE +   L ++D D   F+A +     +     RN 
Sbjct: 353 KV---DKGELA--GPVAKFLTGI-TEKLTASLQLEDKDLVLFVADELEVANNTLGALRNR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+E G+I+ + F F WI+D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 LAKEQGLIDESKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTEETAHHLDGDLAQVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  Q F  +G S E    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDMQEQMFKALGFSAEDAHEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR VMLL G  N+REV  FP +    D +  +PSTV+  QL EL L I 
Sbjct: 527 AIGLDRFVMLLAGEDNIREVIAFPKNNKASDPMTQAPSTVASAQLEELALDIT 579


>gi|194467778|ref|ZP_03073764.1| aspartyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194452631|gb|EDX41529.1| aspartyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 600

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 219/596 (36%), Positives = 333/596 (55%), Gaps = 12/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
             RT+  GD     VG  V L GWV + R  GG+IF+D+ D  GI Q+V N       FE
Sbjct: 1   MKRTNYAGDTNEQQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKENPEAFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA +VR+++VL + G V  R+ + IN ++ TG++E++  K+++L+ +E  P  +    + 
Sbjct: 61  IANAVRNQYVLEVQGKVQLRAEKEINPDMKTGKVEVAVDKVKVLAKSETTPFDITDGVDA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + +N+  R+++ + +      E F++  TP LT S+PEGARD+
Sbjct: 121 SEDLRMKYRYLDLRRPEMMRNLKLRSKVASIVHNYYDNEGFMDVETPDLTRSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSRV  G FYALPQ+PQ +KQLLMA+G D+Y+Q+A CFRDED R DR P EF Q+D E
Sbjct: 181 IVPSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQP-EFTQIDTE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF   +DI    E +++ V +E    + V   F R+ + +A+ +YG+DKPD R  +++H
Sbjct: 240 MSFATPEDIQTVTEGLIKRVMKEIVGVD-VKTPFPRMEWQEAMDKYGSDKPDTRFGMLIH 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++    S F+VF+  ++         +P      +R    +  E+ +  G  GLA++ 
Sbjct: 299 DLSDIVKDSSFKVFANTVADGNYVRAIRVPGGADKYSRKDISKYEEYIKRFGAKGLAWVK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GPVAK LN      I   +D ++GD   F+AG            R  I
Sbjct: 359 VTAD-----GYNGPVAKFLND-QVAQINEEMDAKEGDLILFVAGSFHVVSDSLGYLRRAI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+EL +I  + + + W++++P +E++E   K   AH+PFTM             D     
Sbjct: 413 AEELDMIKPDQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAH 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD++ NG EI  G IR H  ++  +    +G +KE  E RFG L +A   GMPP GG
Sbjct: 473 AQSYDIILNGNEIGGGSIRIHDPKIQEKVLKALGYTKERAEARFGFLLKALTMGMPPEGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL  A ++R+V  FP +    + L  +P  VS +QL +L +   E 
Sbjct: 533 LAFGLDRWVMLLAQADSIRDVIPFPKNSKAVEPLTAAPGKVSEQQLDDLKIEFDEK 588


>gi|15901929|ref|NP_346533.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111656894|ref|ZP_01407723.1| hypothetical protein SpneT_02001855 [Streptococcus pneumoniae
           TIGR4]
 gi|148992039|ref|ZP_01821813.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168489178|ref|ZP_02713377.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|24212415|sp|Q97ND6|SYD_STRPN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|14973626|gb|AAK76173.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|147929088|gb|EDK80099.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183572297|gb|EDT92825.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332071549|gb|EGI82042.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 587

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 349/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E+++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITESLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVRGVDFKVFSEA----PAVKAIVVTGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQ-EELTTALVLEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|188990562|ref|YP_001902572.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|229559950|sp|B0RPX9|SYD_XANCB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167732322|emb|CAP50514.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 588

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 227/596 (38%), Positives = 334/596 (56%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPAEGDANSAEV 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  I TG++E+ A +I IL+ A    LP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKIRTGKVEVIATRITILNKAAP--LPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEDTRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  +   ++  F R+ + +A+RRYG+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVE-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V E    SEF VF+   +   G         G   +R   D     A   G  GLAY
Sbjct: 296 LVDVAELVKTSEFPVFAAAANDADGRVAALRIPGGATLSRKQIDDYAAHAAKYGAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +L ESG V+   P+AK        A+   +   +GD  FF AG   K   F    R 
Sbjct: 356 I--KLSESGEVS--SPIAKFFGEEAFAALLAHVGAANGDIVFFGAGSYNKVSDFMGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              ++ G++    +   W+ DFP +EW+EE ++    H+PFT P     +    +  +  
Sbjct: 412 KAGKDFGLVAAG-WAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTAV 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGG
Sbjct: 471 SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ EQL E+ +++   
Sbjct: 531 IAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAAEQLAEVHVQVRPK 586


>gi|41407161|ref|NP_959997.1| aspartyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|62287578|sp|Q741M7|SYD_MYCPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|41395512|gb|AAS03380.1| AspS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 591

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 233/603 (38%), Positives = 330/603 (54%), Gaps = 26/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+ G L  SD G  V L+GWV R R HGG+IF+D+RD  GITQVV   D    + A  
Sbjct: 3   RSHAAGSLRSSDAGQQVTLAGWVARRRDHGGVIFIDLRDASGITQVVF-RDPDVLKQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + GLV  R     N  I TG IE++A  + +L  +    LP   +    E +
Sbjct: 62  LRAEFCVAVTGLVEIRPEGNANPEIATGDIEVNASSLTVLGESAP--LPFQLDEPAGEEL 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRRD     I  R+++  + R  +   +F+E  TP +T S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRRDAPASAIRLRSKVNAAAREVLDRHDFVEIETPTITRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 180 RLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +D++   E +L  ++        +     RI Y DA+ RYG+DKPDLR  + +   +E
Sbjct: 239 DAEDVIAISEEILAALWALIG--YDIPRPIPRISYADAMARYGSDKPDLRFGLELVECSE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 297 FFKDTTFRVFQAP------YVGAVVMPGGASQPRRTLDGWQEWAKQRGAKGLAYVL--VG 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L+      +   +    GD  FF AG      +    AR+ IA  L
Sbjct: 349 EDGELG--GPVAKNLSEAERAGLAGHVGAAPGDCIFFAAGPAKPSRALLGAARSEIAHRL 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
           G+I+   + F W++D P +E  ++                 H+ FT P+ G E     D 
Sbjct: 407 GLIDPQAWAFVWVVDPPLFEPADDATAAGDVAVGSGAWTAVHHAFTAPKPGYEDAIETDT 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            ++ A  YD+VCNG EI  G IR H  ++  + F+ +G+     + +FG L  AF  G P
Sbjct: 467 GNVLADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDHAEAQEKFGFLLEAFTFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRI  LL    ++REV  FP +    D L  +P+ ++ +Q +E G+ +   
Sbjct: 527 PHGGIAFGWDRINALLSRVDSIREVIAFPKTGGGVDPLTDAPAPITEQQRKESGIDVKPE 586

Query: 595 PKK 597
           P K
Sbjct: 587 PSK 589


>gi|57234484|ref|YP_181449.1| aspartyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|97196655|sp|Q3Z8K0|SYD_DEHE1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|57224932|gb|AAW39989.1| aspartyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 598

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 245/600 (40%), Positives = 360/600 (60%), Gaps = 12/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           +THSC  L   ++G+ V L+GWVHR R HGG+IF+D+RD  GI QVV NP+ +  C +I 
Sbjct: 3   KTHSCA-LTQENIGTEVTLAGWVHRRRDHGGVIFIDLRDREGIVQVVFNPEQSAACLDIG 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +RSE+VL + G V  R A T N+ +++G +E+ A+  +IL+ A+  P  +  E E  E
Sbjct: 62  KELRSEYVLQVKGTVSHRPAGTENSRMLSGLVEVVAEGAKILNTAKTPPFYINEEVEVDE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LD+RR  +  N++ R + ++ MR  +    FIE  TPIL  S+PEGARD+LV
Sbjct: 122 SLRLKYRYLDIRRQGMKNNLIIRHKTVSFMRQFLNDRGFIEIETPILIKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQQ KQLLM +G ++Y+Q+A CFRDED R+DR P EF QLDMEMS
Sbjct: 182 PSRLFPGQFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQP-EFTQLDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++D++  ME++  G+          +  F RI + DA+ +YG DKPDLR  + + ++
Sbjct: 241 FVDENDMMQLMEDLFTGLVASVRPDMKYNKKFPRISFADAMEKYGCDKPDLRFGMELADI 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+    S F VF  + +     +  + P  GG  N++  + +   A+  G  GL  I   
Sbjct: 301 TDIGASSAFGVFKNVAAQGGAIKAISAPGCGG-YNKSQQEELINLAKKYGAAGLVPISLG 359

Query: 363 LDESGNVAGM------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
             ESG +  +         AK+L +   + I  R   + G     +AG      S   + 
Sbjct: 360 A-ESGELKDLTMEMVKSVSAKYLTLEEIKTIAERSGAKPGGLILIVAGARKMVNSVLGEM 418

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           RNH+A +L + + N   F +++DFP ++W+EE K+ D  H+PFT P      L   D   
Sbjct: 419 RNHLAAKLDLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLESDLPLMDTDPAR 478

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + +  YD+VCNG+EIA G IR H +++  + F  +G + E ++ RFG L  AF+ G PPH
Sbjct: 479 VGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFHLLGYNNEQIDERFGHLLEAFEFGAPPH 538

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A GIDR VMLL G  ++REV  FP +Q   DLL G+PS V  +Q+R+L +RI    +
Sbjct: 539 GGVAPGIDRFVMLLAGETSIREVIPFPKNQAAQDLLFGAPSVVDDKQIRDLHIRIQTEKE 598


>gi|148543955|ref|YP_001271325.1| aspartyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184153350|ref|YP_001841691.1| aspartyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|227364868|ref|ZP_03848915.1| aspartyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682507|ref|ZP_08162024.1| aspartate--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|166979991|sp|A5VJG4|SYD_LACRD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229559872|sp|B2G6X9|SYD_LACRJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148530989|gb|ABQ82988.1| aspartyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224694|dbj|BAG25211.1| aspartyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227070131|gb|EEI08507.1| aspartyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324978346|gb|EGC15296.1| aspartate--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 600

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 218/596 (36%), Positives = 333/596 (55%), Gaps = 12/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
             RT+  GD     VG  V L GWV + R  GG+IF+D+ D  GI Q+V N       FE
Sbjct: 1   MKRTNYAGDTNEQQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKENPEAFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA +VR+++VL + G V  R+ + IN ++ TG++E++  ++++L+ +E  P  +    + 
Sbjct: 61  IANAVRNQYVLEVQGKVQLRAEKEINPDMKTGKVEVAVDEVKVLAKSETTPFDITDGVDA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + +N+  R+++ + +      E F++  TP LT S+PEGARD+
Sbjct: 121 SEDLRMKYRYLDLRRPEMMRNLKLRSKVASIVHNYYDNEGFMDVETPDLTRSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSRV  G FYALPQ+PQ +KQLLMA+G D+Y+Q+A CFRDED R DR P EF Q+D E
Sbjct: 181 IVPSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQP-EFTQIDTE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF   +DI    E +++ V +E    + V   F R+ + +A+ +YG+DKPD R  +++H
Sbjct: 240 MSFATPEDIQTVTEGLIKRVMKEIVGVD-VKTPFPRMEWQEAMDKYGSDKPDTRFGMLIH 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++    S F+VF+  ++         +P      +R    +  E+ +  G  GLA++ 
Sbjct: 299 DLSDIVKDSSFKVFANTVADGNYVRAIRVPGGADKYSRKDISKYEEYIKRFGAKGLAWVK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GPVAK LN      I   +D ++GD   F+AG            R  I
Sbjct: 359 VTAD-----GYNGPVAKFLND-QVAQINEEMDAKEGDLILFVAGSFHVVSDSLGYLRRAI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+EL +I  + + + W++++P +E++E   K   AH+PFTM             D     
Sbjct: 413 AEELDMIKPDQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAH 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD++ NG EI  G IR H  ++  +    +G +KE  E RFG L +A   GMPP GG
Sbjct: 473 AQSYDIILNGNEIGGGSIRIHDPKIQEKVLKALGYTKERAEARFGFLLKALTMGMPPEGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL  A ++R+V  FP +    + L  +P  VS +QL +L +   E 
Sbjct: 533 LAFGLDRWVMLLAQADSIRDVIPFPKNSKAVEPLTAAPGKVSEQQLDDLKIEFDEK 588


>gi|197303676|ref|ZP_03168713.1| hypothetical protein RUMLAC_02403 [Ruminococcus lactaris ATCC
           29176]
 gi|197297196|gb|EDY31759.1| hypothetical protein RUMLAC_02403 [Ruminococcus lactaris ATCC
           29176]
          Length = 596

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 229/596 (38%), Positives = 336/596 (56%), Gaps = 11/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFE 60
            RTH CG+L   +VG  V + GWV + R  GG++F D+RD  GI QVV      + A  E
Sbjct: 9   KRTHRCGELSAVNVGETVTIMGWVQKNRNKGGLVFTDVRDRSGIIQVVCEEGTTEPALIE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A S+RSE+V+ I G V  RS   +N  I TG+IE+   ++ ILS A   P P+    + 
Sbjct: 69  KAASLRSEYVVAIVGKVARRSG-AVNDKIATGEIEVIPSELRILSEAMTPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LDLRR  L +N+  +++++   R     E F+E  TP+L  ++PEGARD+
Sbjct: 128 KEEIRLKYRYLDLRRPDLQRNLKMKSQVMTLTRQYFAEEGFLEVETPMLGKTTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFY LPQ+PQ YKQLLM SG DRY QIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGSFYGLPQSPQLYKQLLMCSGVDRYIQIARCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E  L+ +F E  +   V     R+ + +A+ R+G+DKPDLR  + + 
Sbjct: 247 LSFVDVDDVIDVNERYLKKLFREVLDVE-VQLPIQRMTWQEAMDRFGSDKPDLRFGMELT 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E      F VF+  L             +GG   R   D++  + +  G  GLAY+ 
Sbjct: 306 DVSEVVKDCGFGVFTAALENGGSVRGINAKGQGG-MPRKKIDKLTAFVKDYGAKGLAYVA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +  E G V      AK +     +A+   ++ + GD   F A             R  +
Sbjct: 365 IQ--EDGTVK--SSFAKFMTEEQMQALIAAMNGEAGDLLLFAADKNKVVWDSLGALRIEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +++ N + F WI +FP  EW+EE+ +    H+PFTMP         +D   ++A 
Sbjct: 421 AKQLELLDKNEYRFVWITEFPLLEWSEEQNRFVAMHHPFTMPMEEDLQYIESDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R    ++  + F  +G + E   ++FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIFQDDIQEKMFHALGFTDEQAYSQFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VML+    ++R+V  FP  ++   L+  +P+    +QL ELGL +V   K
Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKIKDASCLMTEAPTPADTKQLEELGLEVVTEEK 596


>gi|189347020|ref|YP_001943549.1| aspartyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|238692154|sp|B3EDE5|SYD_CHLL2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189341167|gb|ACD90570.1| aspartyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 605

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 287/600 (47%), Positives = 389/600 (64%), Gaps = 8/600 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FE 60
           +R+RT  CG LGV      VRL GWVHR R HGG+IF+D+RDH G+ Q+V  P+    F 
Sbjct: 13  NRFRTDYCGLLGVGSENRSVRLGGWVHRKRDHGGLIFIDLRDHTGVCQLVIQPEQQALFN 72

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + + +E V+CI+G V+ RS+ET+N  + +G+IE+    + I S A+ LP PV  E   
Sbjct: 73  AVEHLHAESVICIEGTVVLRSSETVNTRLASGEIEVVVSSVIIESDAQPLPFPVADEVPT 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRF+DLRR+ +H+NI+ R+R+   +R  +    FIE  TPILT+SSPEGARDF
Sbjct: 133 SEELRLKYRFIDLRREKIHENIIFRSRLTAMVRRYLEEREFIEIQTPILTSSSPEGARDF 192

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQ+DME
Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQIDME 252

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQ+D+   +E + + + E  S        F RI Y + + R+G+DKPDLR P+ + 
Sbjct: 253 MAFIEQNDLFEILEGMFKHLTENMSQKRITQFPFPRISYREVMNRFGSDKPDLRIPLEIQ 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT  FV+S F+VF+         +   +  +GG  +R F D+  + AR  G  GLAYI 
Sbjct: 313 DVTSLFVNSSFKVFASNTKEGTCVKALVLKGRGGE-SRMFYDKAEKRARELGSAGLAYIQ 371

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +R          GP+ K L     E ++ +L ++ GD  FF AG     C      R + 
Sbjct: 372 FR-----EEGPKGPIVKFLGEAEMEVLKEQLGLETGDVVFFGAGKWESTCKIMGGMRIYF 426

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A    + + +   FCWI+DFP YE+NEE KKIDF+HNPF+MPQG ME+L+    L I A+
Sbjct: 427 ADLFDL-DKDELSFCWIVDFPMYEYNEEAKKIDFSHNPFSMPQGEMEALETMQPLDILAY 485

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  ++M +AF   G +KE V++RFG +  AF+ G PPHGGIA
Sbjct: 486 QYDIVCNGIELSSGAIRNHRPDIMYRAFEIAGYTKEEVDSRFGHMIDAFKLGAPPHGGIA 545

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DR+VM+L   +N+REV  FPM+Q   DL+M +PS V  +QL+EL L+I   P K  K
Sbjct: 546 PGLDRMVMILRDEQNIREVIAFPMNQQAQDLMMSAPSEVMAQQLKELHLKIDLPPVKEAK 605


>gi|229826227|ref|ZP_04452296.1| hypothetical protein GCWU000182_01599 [Abiotrophia defectiva ATCC
           49176]
 gi|229789097|gb|EEP25211.1| hypothetical protein GCWU000182_01599 [Abiotrophia defectiva ATCC
           49176]
          Length = 596

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 238/599 (39%), Positives = 345/599 (57%), Gaps = 13/599 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-- 58
           MH  RTH C +L   D+G  V + GWV + R  GG+IF+D+RD  GI Q+V         
Sbjct: 8   MH--RTHRCTELNKEDIGKTVTVMGWVAKYRNKGGLIFIDLRDRSGILQLVYEEQDCGSE 65

Query: 59  -FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            FE A  +R+E+V+   G+V  R+A  +N NI TG IE+  ++  ILS +E  P  +  +
Sbjct: 66  VFEKAAKLRNEYVIAATGVVTERAA--VNENIPTGHIEIRVKETRILSESETTPFEIVND 123

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +  E +R KYR+LDLRR  + + ++ +++++  MR  M  E F+E  TPI+  S+PEGA
Sbjct: 124 LKTKEELRLKYRYLDLRRPDMQEKLMLKSKVLRLMRDFMADEGFVEVETPIMCNSTPEGA 183

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRVNQG FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q 
Sbjct: 184 RDYLVPSRVNQGCFYALPQSPQVLKQLLMLSGFDRYFQIARCFRDEDLRADRQP-EFTQA 242

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DME+SFV+ DD+L   E +++ + +E    +       R+ + DA+  YG+DKPD R  +
Sbjct: 243 DMELSFVDVDDVLEVNERLIKHIMKETKGIDI-ELPLPRMRWQDAMNDYGSDKPDTRFEM 301

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + +V+E      F VF+  L +  G           G  R   D + + A+  G  GLA
Sbjct: 302 KLVDVSEVVKGCGFGVFTSALEMKNGSVRGINVKGQAGMPRKKIDALVDKAKGFGAKGLA 361

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+    D           +K +     + +   +  + GD   F A       +     R
Sbjct: 362 YLAVNEDG----TYKSSFSKFMTEEELDKLVQTMKGEKGDLLLFAADKTALVWNVLGALR 417

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             I +ELG+I+ + F F WI++FP   WNE+E +    H+PFT P          D  SI
Sbjct: 418 LDIGEELGLIDKSKFNFLWIVEFPLLGWNEDENRFQAEHHPFTAPMEEDWENADKDPGSI 477

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R + ++V  + F  +G +KE   ++FG L  AF+ G+PPH 
Sbjct: 478 RAKAYDIVLNGYELGGGSVRIYQNDVQEKMFELLGFTKEEAHSKFGFLLDAFKYGVPPHA 537

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+A G+DR VMLL GA+N+REV  FP +++  DL++GSP+TV  +QL ELG+ I +  +
Sbjct: 538 GLAYGVDRFVMLLAGAENIREVIAFPKNKDAMDLMLGSPNTVDTKQLDELGIMIKKTEE 596


>gi|327252995|gb|EGE64649.1| aspartyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 573

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 213/576 (36%), Positives = 320/576 (55%), Gaps = 7/576 (1%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGLVMSR 80
            L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G V +R
Sbjct: 2   TLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRAR 61

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             + IN ++ TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR  + +
Sbjct: 62  DEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRPEMAQ 119

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
            +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ 
Sbjct: 120 RLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQL 179

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R +
Sbjct: 180 FKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHL 238

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
           + E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + 
Sbjct: 239 WLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAND 296

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
             G         G    R   D    + +  G  GLAYI       G      PVAK LN
Sbjct: 297 PKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLN 356

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
               EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W++DF
Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDF 416

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H 
Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHN 475

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V 
Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALSELSIQVVKKAE 571


>gi|225861929|ref|YP_002743438.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298231028|ref|ZP_06964709.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254087|ref|ZP_06977673.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298501615|ref|YP_003723555.1| aspartate--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|254781758|sp|C1CU16|SYD_STRZT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225727479|gb|ACO23330.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237210|gb|ADI68341.1| aspartate--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|327388849|gb|EGE87197.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 587

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 348/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRVKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQ-EELTTALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|217967356|ref|YP_002352862.1| aspartyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|226736535|sp|B8E1C0|SYD_DICTD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|217336455|gb|ACK42248.1| aspartyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 592

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 239/598 (39%), Positives = 347/598 (58%), Gaps = 11/598 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L   ++G  V LSGWVHR+R HGG+IF+D+RD  GI Q+V +P      ++IA
Sbjct: 3   RTHYCGELNAKNIGEKVYLSGWVHRIRHHGGLIFIDLRDRSGIVQLVFDPSISKESYDIA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +V +EWV+ ++G V  R     N  I TG+IE+  +KI+I + A+ LP  ++  +E  E
Sbjct: 63  DTVGNEWVISVEGKVRKRPEGMENPKIPTGEIEIEVEKIKIENTAKPLPFNLWTNKEIDE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRRD +  NI+ R   I S+R  +    FIE  TP L  S+PEGARDF++
Sbjct: 123 IVRLKYRYLDLRRDKMQSNIIFRHNFILSIRNFLAKNGFIEIETPYLIVSTPEGARDFII 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQ+LM +GFDRYFQIA CFRDED R+DR P EF QLDMEMS
Sbjct: 183 PSRLQPGKFYALPQSPQLFKQILMVAGFDRYFQIARCFRDEDLRADRQP-EFTQLDMEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+E +D+   +E + + V +E  N       F R+ Y+DA+  YG+DKPDLR  + + +V
Sbjct: 242 FIEVEDVFTIIEELFKTVLKEVMNIEIN-TPFPRLSYEDAMNTYGSDKPDLRYDLKIVDV 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T              +  +   +   I  K    +R     +    R     G+ +  + 
Sbjct: 301 TNILKDLPLEFIRSTIEKDGVIK--GIVLKNIVPSRREWSIIENKVRELKGKGIMWFTY- 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
               G +     ++K+L+    + +   L+++ GDS F IAG            R  +A+
Sbjct: 358 --ADGELK--SSISKYLDENIKDKLIKNLNLKSGDSFFCIAGTWKDVVKILGILRLEVAE 413

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              +       F WI DFP +E++EEE++I   H+PFT P+     L   + L +KA  Y
Sbjct: 414 LFNMEKKEGLFFLWITDFPLFEYDEEERRIVAEHHPFTSPKDEDIPLLDTNPLKVKAKCY 473

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+ SG IR H  E+  + F+ +GI+ E  + +FG L  AF+ G PPHGGIA G
Sbjct: 474 DLVLNGTELGSGSIRIHKKEIQEKVFNILGITPEDAKKKFGFLLEAFEYGAPPHGGIALG 533

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           IDRI+ +L  + ++REV  FP +Q+   LL G+PS V  +QL E+ +++V   +K  +
Sbjct: 534 IDRIIAILTNSNSLREVIAFPKTQSGTCLLTGAPSEVDPKQLEEVHIKVVYPEEKKEE 591


>gi|323174759|gb|EFZ60375.1| aspartyl-tRNA synthetase [Escherichia coli LT-68]
 gi|332090043|gb|EGI95143.1| aspartyl-tRNA synthetase [Shigella boydii 5216-82]
 gi|332096621|gb|EGJ01615.1| aspartyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 573

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 213/576 (36%), Positives = 320/576 (55%), Gaps = 7/576 (1%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGLVMSR 80
            L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G V +R
Sbjct: 2   TLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRAR 61

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             + IN ++ TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR  + +
Sbjct: 62  DEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRPEMAQ 119

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
            +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ 
Sbjct: 120 RLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQL 179

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R +
Sbjct: 180 FKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHL 238

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
           + E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + 
Sbjct: 239 WLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAND 296

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
             G         G    R   D    + +  G  GLAYI       G      PVAK LN
Sbjct: 297 PKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLN 356

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
               EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W++DF
Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDF 416

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H 
Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHN 475

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V 
Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 571


>gi|283458011|ref|YP_003362618.1| aspartyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134033|dbj|BAI64798.1| aspartyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 620

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 229/606 (37%), Positives = 326/606 (53%), Gaps = 27/606 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M   RTH+ G+L  +++G  V L+GWV R R HGG+ F+D+RD  G+TQ V         
Sbjct: 29  MSVLRTHTNGELTAANIGETVTLTGWVARRRDHGGVAFVDLRDREGVTQCVF----HNEA 84

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +R+E+VL + GLV  R     N N+ TG+IE+    +E+L+ A  LP  +    E 
Sbjct: 85  DFEHLRNEYVLRVTGLVTKRPEGNENPNLATGEIEVEVSAVEVLNTAAPLPFQIDEHVEV 144

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR+LDLRR    + +  R+    + R  +  + +IE  TP LT S+PEGARDF
Sbjct: 145 GEEARLRYRYLDLRRPEPARIMRLRSDANRAARNLLAEDGYIEVETPTLTRSTPEGARDF 204

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLL   G ++Y+QIA C+RDED R+DR P EF QLD+E
Sbjct: 205 LVPARLAPGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQP-EFTQLDIE 263

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SFV+Q+DI+   E ++  V+        V     R+ Y DA+ +YG+DKPDLR  + + 
Sbjct: 264 ASFVDQEDIIELGERIVEAVWNLI--DVKVPRPIQRMTYKDAMEKYGSDKPDLRFGLELT 321

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +TE+F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+ 
Sbjct: 322 ELTEYFKDTTFRVFKAP------YVGAVVMPGGASQPRRTLDAWQEWAKQRGAKGLAYVL 375

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +  E G +   GPVAK++       +      + GD  FF AG+     +    AR  I
Sbjct: 376 IQ--EDGELT--GPVAKNITDAERAGLAEATGAKPGDCIFFAAGEAKASRALLGAARVEI 431

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGMESLK 470
               G+I    + F W++D P +E + E                 H+ FT P+       
Sbjct: 432 GHRTGLIKDGEWSFVWVVDAPMFESSAEATESGDVALGHSAWTAVHHAFTSPKPEFMDTF 491

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  S  A+ YD+VCNG EI  G IR H  +V  + F+ +GI +E  + +FG L  AF+
Sbjct: 492 DTDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFAVMGIGEEEAQEKFGFLLDAFK 551

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PP GGIA G DRIV LL G  ++REV  FP + N  D L  +P+ ++ EQ +E G+ 
Sbjct: 552 YGAPPMGGIAFGWDRIVSLLAGVDSIREVIAFPKTGNGFDPLTAAPAPITPEQRKEAGVD 611

Query: 591 IVENPK 596
                K
Sbjct: 612 FKPKKK 617


>gi|145594364|ref|YP_001158661.1| aspartyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|189082140|sp|A4X5Y3|SYD_SALTO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145303701|gb|ABP54283.1| aspartyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 607

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 226/604 (37%), Positives = 339/604 (56%), Gaps = 17/604 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  +D GS V L+GWV R R HGG+IF+D+RD  G+ QVV        E A  
Sbjct: 3   RTHDAGSLRATDAGSTVTLAGWVARRRDHGGVIFVDLRDGSGVAQVVLR-----EEDAHV 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  + TG++E++A+++E+LS A  LPLPV  + E  + +
Sbjct: 58  LRNEYCVRVTGEVTRRPEGNENPELATGEVEVTAEELEVLSEAAPLPLPVDDQIEAGDDV 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR      +  R+      R  +   +F+E  TP LT S+PEGARDFLVP 
Sbjct: 118 RLRYRYLDLRRSGPASALRLRSAANQIARTVLHERDFLEIETPTLTRSTPEGARDFLVPV 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G++YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 178 RLQPGTWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +DD+++  E ++  ++ E +     +    RI + +A+ RYG+DKPDLR  + +  +T+
Sbjct: 237 TEDDVIDLGEAIVSRLWRELAGHQI-TRPIPRITWHEAMARYGSDKPDLRYGVELTELTD 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +   + FRVF+  +          +   G   +R   D   +WA+++G  GLAY+   + 
Sbjct: 296 YLRGTRFRVFAGAIEAGGYV-GAVVMPGGAAQSRKELDGWQDWAKARGAKGLAYV---VL 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC-SFAADARNHIAQE 423
           ++      GPVAK+L+  +   +   +  + GD+ FF AG   +        AR  IA+ 
Sbjct: 352 DAETGEARGPVAKNLSTEHLAGLADVVGAKPGDAIFFAAGAESRAAQELLGAARVEIARR 411

Query: 424 LGIINCNCFEFCWIMDFPFYEW--NEEE---KKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
             +++ + + FCW++D P +E   + EE         H+PFT P                
Sbjct: 412 ANLVDESAWAFCWVVDAPMFERVTDREEAGAGGWTAVHHPFTAPNAEWMDRFEEAPDRAL 471

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+ YD+VCNG EI  G IR H  +V  + F  +GI+ E   ++FG L  AF+ G PPHGG
Sbjct: 472 AYAYDIVCNGNEIGGGSIRIHRGDVQQRVFDLLGITPEQARDKFGFLLEAFKYGPPPHGG 531

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           IA G DR+ MLL GA ++REV  FP ++   D L  +P+ ++  Q  E G+     P+  
Sbjct: 532 IAFGWDRVCMLLAGADSIREVIAFPKTRGGFDPLTAAPTPITAAQRLEAGVDARPKPEAR 591

Query: 599 LKIS 602
            +  
Sbjct: 592 AQAG 595


>gi|301795040|emb|CBW37505.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 587

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 234/596 (39%), Positives = 349/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGTVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKEAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D  FF+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQ-EELTTALALEDKDLVFFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETVHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|38233939|ref|NP_939706.1| aspartyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|62287571|sp|Q6NGZ4|SYD_CORDI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|38200200|emb|CAE49881.1| aspartyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 601

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 237/609 (38%), Positives = 335/609 (55%), Gaps = 27/609 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH  RTH  GDLG    G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +    E
Sbjct: 1   MHVLRTHLAGDLGKETAGQTVTLTGWVSRRRDHGGVIFIDLRDSSGLVQVVFRENDVA-E 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG---E 117
            A  +RSE+ + + G V +R   + N N+ +G IE++   +EIL+ A  LP  +      
Sbjct: 60  QAHHLRSEFCIKVTGEVEARPEGSENPNLASGAIEVNVTDLEILNEAAPLPFQIDDVSQG 119

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            E  E  R KYR+LDLRR      +  R++   + R  + + +F+E  TP LT S+PEGA
Sbjct: 120 GEVGEETRLKYRYLDLRRPNQGAALRLRSQANKAARNVLDSHDFVEIETPTLTRSTPEGA 179

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RDFLVP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QL
Sbjct: 180 RDFLVPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQL 238

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV+QDD++   E ++  +++       +     R+ Y DA+R YG+DKPDLR  I
Sbjct: 239 DIEMSFVDQDDVIALAEEIVSSLWKLIG--YEIPTPIPRMTYADAMRLYGSDKPDLRFDI 296

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            +   T+ F ++ FRVF         Y    +   G    R   D   EWA+ +G  GLA
Sbjct: 297 KIVECTDFFKNTTFRVFQN------EYVGAVVMDGGASQPRRQLDAWQEWAKQRGAKGLA 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI   + E+G +   GPV+K++       I   +  + GD  FF AG+     +    AR
Sbjct: 351 YIL--VGENGELT--GPVSKNITDEERAGIAAHVGAKPGDCIFFAAGETKSSRALLGAAR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGME 467
           N IA++L +I    + F W++D P +E + +            K    H+ FT P+    
Sbjct: 407 NEIAKKLDLIKEGDWAFTWVVDAPLFEPSSDATASGDVALGHSKWTAVHHAFTSPKPEWL 466

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                +     A+ YD+VCNG EI  G IR H  +V  + F  +GI+++    +FG L  
Sbjct: 467 DSFDENPGEATAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEDEAREKFGFLLD 526

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF  G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ + +EQ RE 
Sbjct: 527 AFAFGAPPHGGIAFGWDRIVSLLGGFSSIRDVIAFPKSGGGVDPLTDAPAPIPLEQRRET 586

Query: 588 GLRIVENPK 596
           G+      K
Sbjct: 587 GVDFKPKKK 595


>gi|145224367|ref|YP_001135045.1| aspartyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|189082105|sp|A4TBU4|SYD_MYCGI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145216853|gb|ABP46257.1| aspartyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
          Length = 590

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 237/599 (39%), Positives = 330/599 (55%), Gaps = 26/599 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT + G L  +D G  V L+GWV R R HGG+IF+D+RD  G++QVV   D A  E A  
Sbjct: 3   RTRTAGSLRPADAGQTVTLAGWVARRRDHGGVIFIDLRDASGVSQVVF-RDGAVLEQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + + G+V  R     NA+I TG++E++A  + +L  +    LP   +    E  
Sbjct: 62  LRSEFCVAVTGVVEIRPEGNANADIPTGEVEVNATSLTVLGES--AALPFQLDETAGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+     I  R+++  + R  +   +F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRREVPGNAIRLRSKVNAAARGVLAGHDFVEIETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + DD++   E VLR V+        +     RI Y DA+RR+G+DKPDLR  + +   TE
Sbjct: 239 DADDVMALSEEVLRAVWATIG--YDLPLPLPRISYADAMRRFGSDKPDLRFGLELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   E+A+ +G  GLAY+    D
Sbjct: 297 YFADTPFRVFQAP------YVGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVLVGKD 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
                   GPVAK+L       +   +    GD  FF AG      +     R  +A+ L
Sbjct: 351 G----ELTGPVAKNLTDAERAGLTAHVGANPGDCVFFAAGTAKSARALLGATRIEVAKRL 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
            +I+ + + F W++D+P +E   E                 H+ FT P    E+    D 
Sbjct: 407 DLIDPDAWAFTWVVDWPMFESAAEATASGDVAVGSGAWTAMHHAFTAPTPESEATFDTDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  +  YD+VCNG EI  G +R H  +V  + F+ +GIS+E  E++FG L  AF  G P
Sbjct: 467 GSALSNAYDIVCNGNEIGGGSLRIHRRDVQERVFAMMGISQEEAEDKFGFLLEAFTFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PHGGIA G DRIV LL G  ++REV  FP S    D L  +P+ ++ +Q +E G+    
Sbjct: 527 PHGGIAFGWDRIVALLAGLDSIREVIAFPKSGGGVDPLTEAPAPITAQQRKESGIDAKP 585


>gi|149006915|ref|ZP_01830596.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|307128374|ref|YP_003880405.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|147761516|gb|EDK68481.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|306485436|gb|ADM92305.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 587

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 348/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKEAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQ-EELTTALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETVHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|253681699|ref|ZP_04862496.1| aspartate--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561411|gb|EES90863.1| aspartate--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 591

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 225/593 (37%), Positives = 341/593 (57%), Gaps = 13/593 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG+L  S +G    + GWV R R  GG++F+D+RD  GI QVV     +   FE 
Sbjct: 9   KRTVMCGELRESHIGQKHVVMGWVQRKRNLGGLVFVDLRDREGILQVVFGEEINKEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  V+ E+ + ++G ++ R   + N  + TG +EL  Q I+ILS +E  P+ +  + +  
Sbjct: 69  ADLVKPEYCIAVEGELVKRQ--SPNETLPTGMVELKGQNIKILSESETPPIYIKEDLDTD 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  +      R +    +R  +    F+E  TP+LT S+PEGARD+L
Sbjct: 127 EAVRLKYRYLDLRRPDMQSIFKIRHKTAKVIRDFLDENGFLEMETPMLTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQ+PQ +KQLLM SG+DRYFQI  CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYPGMFYALPQSPQLFKQLLMVSGYDRYFQITKCFRDEDLRANRQP-EFTQVDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ +D+++  E +++ VF+E ++ + V     RI Y +A+ +YG+DKPDLR  + ++N
Sbjct: 246 SFVDMEDVISLNERLIKKVFKEIADVD-VKLPIQRITYKEAMDKYGSDKPDLRFGMEINN 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F+VF   +          +P   G G R   D++ E+ ++    GLA+I +
Sbjct: 305 ITDAVKDIDFKVFKDAIENGGSVRAIKVPNCAGMG-RKQIDKLGEFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE        P+AK L      A+  +LD + GD    +A             R  +A
Sbjct: 364 KEDE-----IKSPIAKFLQEEGMNAVIEKLDAKVGDLILIVADKDSVVLQALGALRLEMA 418

Query: 422 QELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           + L I+  N  F+F W+ +FP   +NEEE +    H+PFTMP         +D   ++A 
Sbjct: 419 KRLEILKDNKEFKFAWVTEFPLLSYNEEENRYQAEHHPFTMPMDEDIEYLESDPGRVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F+ +G + E    RFG L  AF+ G PPHGG+A
Sbjct: 479 AYDIVLNGEELGGGSIRIHDTKLQEKMFNVLGFTSESAWERFGFLLEAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G DR++M L G +N+++V  FP +QN    L  +P+ V  +QL ELG+ + +
Sbjct: 539 YGFDRMIMFLAGTENIKDVIAFPKNQNAYCPLTEAPNVVDEKQLGELGINLKK 591


>gi|322378031|ref|ZP_08052518.1| aspartate--tRNA ligase [Streptococcus sp. M334]
 gi|321281013|gb|EFX58026.1| aspartate--tRNA ligase [Streptococcus sp. M334]
          Length = 587

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 231/596 (38%), Positives = 347/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VALPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T      +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTAVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTSIQAE-LTTALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S +   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAKEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|306826288|ref|ZP_07459622.1| aspartate--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431564|gb|EFM34546.1| aspartate--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 587

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 231/596 (38%), Positives = 347/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + KN+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLKNLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKGIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  + +   L +++ D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQAD-LTTALGLEEKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELDLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETVHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|81428474|ref|YP_395474.1| aspartyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|97196706|sp|Q38XB6|SYD_LACSS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78610116|emb|CAI55165.1| Aspartyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 590

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 216/596 (36%), Positives = 334/596 (56%), Gaps = 9/596 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEI 61
           + RT   G +  + VG  V L GWV + R  G +IF+D+RD  G+ Q+V N D+     +
Sbjct: 2   KTRTTYSGLVDETFVGQTVTLHGWVQKRRSLGNLIFVDLRDREGLVQLVFNQDNADILAL 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A ++R+E+V+ + G+V +R    IN ++ TG++E+   ++ IL+ A+ LP  +       
Sbjct: 62  ANTLRNEYVIEVTGMVQARDEAAINPDMKTGKVEVIVSELTILNEAKNLPFEIKDGITTS 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  + KYR+LDLRR  + + I++R++I  +    +    F+   TP LT S+PEGARD+L
Sbjct: 122 EETKLKYRYLDLRRPEMQQAIIRRSQITQAAHKYLDNNGFLNIETPDLTRSTPEGARDYL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  GSFYALPQ+PQ +KQLLM +GFDRY+Q+A CFRDED R DR P EF Q+D+E 
Sbjct: 182 VPSRVYPGSFYALPQSPQVFKQLLMDAGFDRYYQMARCFRDEDLRGDRQP-EFTQIDVET 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+  ++I    E +++ V ++  + + V   F R+ + +A+ RYG+DKPD+R  + + +
Sbjct: 241 SFMSAEEIQEQAEGIIKQVMQDVMHID-VPTPFKRMKWQEAMDRYGSDKPDIRFDLEIQD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE    S F+VFS   +         +P      +R   D   E+ +  G  G+A++  
Sbjct: 300 LTEMMKTSSFKVFSDTANSGNLVRAIVVPEGAAKYSRKMLDEQTEYIKRYGARGMAWVKV 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E       GP AK L     E +   L  +DGD   F+A      C      R H A
Sbjct: 360 VDGE-----LTGPAAKFLKEQEAE-LLSALSAKDGDLVLFVADKFQVVCDSLGYLRKHFA 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            ++G+++ + F + W++D+P +E++E   +   AH+PFT P      L   D     A  
Sbjct: 414 HDMGLVDESQFAYLWVVDWPLFEYDEGFGRWIAAHHPFTRPNDSDVDLLETDPHKAHAQS 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD++ NG+E+  G +R +  ++  + F  +GIS E  E +FG L  A   G PPHGG A 
Sbjct: 474 YDIILNGYELGGGSLRIYQRDIQERMFKALGISPETYEEQFGHLLSAMDYGFPPHGGFAI 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR  MLL G  N+R+V  FP + +  + +  +PS V+  QL ELGL +    +K
Sbjct: 534 GLDRFAMLLAGRDNIRDVIAFPKNSHASEPMTNAPSRVAPAQLDELGLEVEPEVEK 589


>gi|294674130|ref|YP_003574746.1| aspartate--tRNA ligase [Prevotella ruminicola 23]
 gi|294473699|gb|ADE83088.1| aspartate--tRNA ligase [Prevotella ruminicola 23]
          Length = 593

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 223/595 (37%), Positives = 336/595 (56%), Gaps = 20/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YR+ +CG+L + D GS V L+GWV R R  GG+ F+D+RD YG+TQ+V N   D+   E
Sbjct: 1   MYRSKTCGELRLQDAGSVVTLAGWVQRSRKMGGMTFVDLRDRYGLTQLVFNEADDAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + I G V  R ++  N  + TG IE+  +++ +LS +   P  +    + 
Sbjct: 61  RANKLGREFCIQIKGEVSERQSK--NPKMPTGDIEILVKELNVLSESLTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  + KN+  R R+   +R  + A+NFIE  TPIL  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRAAVRKNLELRHRMTILIRNFLDAQNFIEVETPILIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D+L   E++ R +F+E       +    R+ +++A+RR+G+DKPDLR  +   
Sbjct: 238 MSFVDQEDVLQIFEDLARHLFKEVRGIELPALQ--RMTWNEAMRRFGSDKPDLRFGMEFV 295

Query: 301 NVTEHFVHSE-FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + +    +  F VF++   +                +R   D + E+ +    G  GL 
Sbjct: 296 ELMDQLKGTGTFPVFNEATYIGG-----ICVPGCANYSRKQLDELTEFVKRPQVGAKGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           Y+ +  +E G V     + K         ++     +DGD    ++GD   K        
Sbjct: 351 YVKF--NEDGTVK--SSIDKFYTPEVWAQVKEACGAKDGDLVLILSGDNANKTRVQLCTL 406

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + + F   WI+DFP +EW++EE+++   H+PFTMP      L   D   
Sbjct: 407 RLEMGDRLGLRDKDKFVCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDTDPAK 466

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G +R H  ++  + F  +G + E    +FG L  AF+ G PPH
Sbjct: 467 VRAVAYDFVCNGVEVGGGSLRIHDGKLQEKMFQILGFTPERAMAQFGFLINAFKYGAPPH 526

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR V L+ G  ++R+   FP + +  D+++ +P  +  +QL EL L++
Sbjct: 527 AGLAFGLDRFVSLMAGLDSIRDCIAFPKNNSGRDVMLDAPGELDQKQLDELQLKV 581


>gi|323340841|ref|ZP_08081093.1| aspartate--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323091964|gb|EFZ34584.1| aspartate--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 586

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 216/594 (36%), Positives = 330/594 (55%), Gaps = 10/594 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             RT   G +    +G  V L GWV + R  G +IF D+RD  G+ Q+V + +     F+
Sbjct: 1   MKRTTYAGLVDEKYLGQEVVLKGWVQKSRNLGNLIFADLRDREGLVQLVFSHEISEEAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA++++SE+V+ I G V+ R+   +N N+ TG+IE+   ++ IL+ A+  P  +  +   
Sbjct: 61  IAETLKSEYVIEIVGKVVGRAENAVNPNMKTGKIEVETSRVTILNEAKTTPFSIEDDTTA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            +  R +YR+LDLRR  + ++++ R RI  ++   +   +F++  TP LT S+PEGARD+
Sbjct: 121 TDDTRLRYRYLDLRRPEMQRSLMIRNRITQTVHRYLDENHFLDIETPYLTRSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  G FYALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R DR P EF Q+DME
Sbjct: 181 LVPSRVYPGHFYALPQSPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQP-EFTQIDME 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+  D+I    E +L+ V +E            +I +++A+ R+G+DKPD+R  + + 
Sbjct: 240 MSFMTADEIREMTEGLLKAVMKETLGIEI-ETPIKQITWNEAMDRFGSDKPDIRFGMELQ 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++ E    + F+VF   L      +   +P      +R   +   E+ +  G  GLA++ 
Sbjct: 299 DMAEVVKGAGFKVFDSALENGGQVKAIVVPGGADKYSRKKIEEKQEYIKRFGAKGLAWMK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                  +    GPV+K       E ++     + GD   F+A +           R  I
Sbjct: 359 VT-----DEGLAGPVSKFFKEKEAE-VKEATGAKAGDLLLFVADNRKVVADSLGYLRVSI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +I+ + F F W++D+P +E++EE ++   AH+PFTMP      L   D     A 
Sbjct: 413 AKELDLIDNSKFAFIWVVDWPLFEYSEEFERYIAAHHPFTMPNEEDLDLLETDPHKCHAQ 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G IR H  ++  + F  +G +KE  E +FG    A   G PPHGG+ 
Sbjct: 473 SYDIVLNGYELGGGSIRIHRRDIQEKMFKALGFTKESAEAQFGWFMEALDYGFPPHGGLG 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR  MLL G  N+REV  FP +    + L  +PSTV+ +QL EL LR    
Sbjct: 533 LGLDRFAMLLAGKDNIREVIAFPKNSKASEPLTNAPSTVAEKQLEELYLRTENK 586


>gi|332198927|gb|EGJ13008.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 587

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 348/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEKEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQ-EELTTALALEDKDLVLFVADTLEVVNATLGTLRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|329117740|ref|ZP_08246457.1| aspartate--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326908145|gb|EGE55059.1| aspartate--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 582

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 232/595 (38%), Positives = 347/595 (58%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVRSEHIGQEITLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPEEVSSELM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +RSE+V+ + G V +R     N N+ TGQ+EL    + IL+ ++  P  +  + E
Sbjct: 61  AMAEGLRSEYVIEVTGQVEARQ--QSNDNLATGQVELKVTSLTILNTSKTTPFEIKDQVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDETRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM SGFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSQGHFYALPQSPQITKQLLMNSGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+++ +I   +E ++  V +E      V+  F R+ YD A+ RYG+DKPD R  +++
Sbjct: 238 ETSFLDEYEIQEIVEGMIAKVMKETKGIE-VTLPFPRMAYDTAMNRYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+  +V        +  K    +R   D+M E+A+  G  GLA+ 
Sbjct: 297 QDLTEVVKEVDFKVFSQAETVKGIV----VKGKADSYSRKDIDKMTEYAKQFGAKGLAWA 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G +   GPV+K L  +  + +   LD  +GD   F+A       +     R  
Sbjct: 353 KVV---DGQLT--GPVSKFLVPI-ADQLTSHLDAGEGDLILFVADSLEVANNTLGALRTR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+E  +++ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IAKEQNLVDADKFNFLWVIDWPMFEWSEEENRYMSAHHPFTLPTEETIEYLNGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++    F  +G ++E  + +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDMQANMFKALGFTEEDAKEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL G  N+REV  FP +    D +  +PSTVSV+QL EL L+I ++
Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSTVSVKQLEELSLQIQDH 581


>gi|225859869|ref|YP_002741379.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|254781753|sp|C1CAU1|SYD_STRP7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225721728|gb|ACO17582.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 587

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 348/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRVKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQ-EELTTALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|146319795|ref|YP_001199507.1| aspartyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146321990|ref|YP_001201701.1| aspartyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253752776|ref|YP_003025917.1| aspartyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253754601|ref|YP_003027742.1| aspartyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|166225435|sp|A4W4L2|SYD_STRS2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225436|sp|A4VYB8|SYD_STRSY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145690601|gb|ABP91107.1| Aspartyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145692796|gb|ABP93301.1| Aspartyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251817065|emb|CAZ52717.1| aspartyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251820847|emb|CAR47613.1| aspartyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|319759194|gb|ADV71136.1| aspartyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 583

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 235/593 (39%), Positives = 346/593 (58%), Gaps = 17/593 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  + L GWV R R  GG+IF+D+RD  GI Q+V NP+S   E+ 
Sbjct: 1   MKRSMYAGRVRKEHVGQEITLKGWVGRRRGLGGLIFIDLRDREGIMQLVINPESVEAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V+ R  E  N NI TG +EL    + +L+ A+  P  +    E
Sbjct: 61  AKAESLRSEFVIEVTGTVVER--EQANDNIPTGAVELQVTSLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  +  N   R  + +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 ASDDTRLRYRYLDLRRPEMLNNFKLRAAVTHSIRNYLDDLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV++G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V ++    + V+  F R+ YD A+  YG+DKPD R  +++
Sbjct: 238 ETSFLNEVEIQDIVEGLIAKVLKDTKGID-VTLPFPRMAYDHAMNFYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ ++A+  G  GLA++
Sbjct: 297 QDLTELVKEVDFKVFSEA----PVVKAIVVKGAADSYSRKDIDKLTDYAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                + G +A  GPVAK L  + TE +   L ++D D   F+A +     +     RN 
Sbjct: 353 KV---DKGELA--GPVAKFLTGI-TEKLTASLQLEDKDLVLFVADELEVANNTLGALRNR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+E G+I+ + F F WI+D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 LAKEQGLIDESKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTEETAHHLDGDLAQVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  Q F  +G S E    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDMQEQMFKALGFSAEDAHEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR VMLL G  N+REV  FP +    D +  +PSTV+  QL EL L I 
Sbjct: 527 AIGLDRFVMLLAGEDNIREVIAFPKNNKASDPMTQAPSTVASAQLEELALDIT 579


>gi|168484062|ref|ZP_02709014.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172042695|gb|EDT50741.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|332198725|gb|EGJ12807.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 587

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 349/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDD++  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDSMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+ L+V        +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEALAVK----AIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQ-EELTTALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|332827897|gb|EGK00619.1| aspartyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 584

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 224/599 (37%), Positives = 335/599 (55%), Gaps = 21/599 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSAC--F 59
            YR H+CG+L ++DV   V L+GWV +VR  GG + F+D+RD YGITQ+  + D     +
Sbjct: 1   MYRNHTCGELTLADVNKEVTLAGWVQKVRKLGGGMTFVDLRDRYGITQLAFSKDVNADLY 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E +     E+VL + G V  RS++  N NI TG+IE+   K+ IL+ +E  P  +  E +
Sbjct: 61  EQSNKFGREYVLQVTGTVQERSSK--NMNIPTGEIEIIVNKLVILNTSEVPPFTIEDETD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLRR  + KN+  R +I    R  +    FIE  TP+L  S+PEGARD
Sbjct: 119 GGEDLRMKYRYLDLRRTPVRKNLELRHKIAFETRRFLDERQFIEVETPVLIGSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNPGEFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMS+V Q+D+LN  E + + +F++    +     F R+ Y  A++ YG+DKPD R  +  
Sbjct: 238 EMSYVSQEDVLNMFEGLTKHLFKKVKGIDIPD--FPRMTYAHAMKYYGSDKPDTRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-GGNRAFCDRMNEWAR--SQGQPGL 356
             + +     +F VF      +    V AI AKG     R   D + ++ +    G  GL
Sbjct: 296 VEIKDLTTGKDFVVF------DSCEYVGAICAKGAVSYTRKQLDALTDYVKRPQIGAKGL 349

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            Y+ +  D     +    V K     + +    R   + GD    I G+  K      + 
Sbjct: 350 VYVRYEADG----SLKSSVDKFYTAEDLKKWAERCQAEPGDLILIICGETEKAQKQLCEL 405

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +  +LG+ + N F   W++DFP  E +EE  +    H+PFT P+     +  +D  +
Sbjct: 406 RLEVGDQLGLRDKNKFNCLWVIDFPLLEKDEELGRFFAKHHPFTSPKEEDIPMLESDPGA 465

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD+V NG E+  G +R H S++  + F  +G ++E  + +FG L  AF+ G PPH
Sbjct: 466 VRANAYDMVINGVEVGGGSVRIHNSQLQNKMFHVLGFTEEKAQAQFGFLMNAFKYGAPPH 525

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+A G+DR+V L  G  ++R+   FP + +  D+++ +P+ +  EQL EL L++    
Sbjct: 526 AGLAFGLDRLVSLFAGLDSIRDCIAFPKNNSGRDVMIDAPAVLEQEQLDELNLKVEIKK 584


>gi|319442141|ref|ZP_07991297.1| aspartyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 600

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 240/597 (40%), Positives = 333/597 (55%), Gaps = 26/597 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH CGDL   D G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +    E A  
Sbjct: 3   RTHLCGDLRSDDTGKEVTLTGWVARRRDHGGVIFIDLRDRSGLAQVVFRENEVA-ERAHD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV--AEELPLPVFGEREYPE 122
           +RSE+ L + G+V +R   + N N+ +G IE++   +EIL+   A    +      E  E
Sbjct: 62  LRSEYCLKVTGIVEARPEGSENPNLASGAIEVNVSDLEILNESTALPFQIEDTTGGEVGE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR+     +  R+++  + R  +  E+F E  TP LT S+PEGARDFLV
Sbjct: 122 ETRLKYRYLDLRRERQAHALRLRSKVSQAARGVLSGEDFTEIETPTLTRSTPEGARDFLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R+  GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMS
Sbjct: 182 PARLRPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+QDD++   EN+L  V++E      +     R+ Y +A+ +YG+DKPDLR  I +   
Sbjct: 241 FVDQDDVIALAENILTAVWKEIG--YDIQTPIPRMTYAEAMEKYGSDKPDLRFDIQITEC 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAYI   
Sbjct: 299 TEFFKDTSFRVFKAP------YVGAVVMEGGASQPRRTLDAWQEWAKQRGAKGLAYIL-- 350

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G +   GPVAK++     E I   +  + GD  FF AG+     +    AR  IA+
Sbjct: 351 VGEDGTLT--GPVAKNITDAEREGIAAHVGAKPGDCIFFGAGEVKPSRALLGAARGEIAE 408

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGMESLKGN 472
            LG+I    + F W++D P +E   +                 H+ FT P+         
Sbjct: 409 RLGLIKEGDWAFTWVVDAPLFEPAADATASGDVALGHSTWTAVHHAFTSPKPEWIDSFDE 468

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +     A+ YD+VCNG EI  G IR H  +V  + F+ +GIS+E    +FG L  AF  G
Sbjct: 469 NPGEATAYAYDIVCNGNEIGGGSIRIHQRDVQERVFAVMGISEEEAREKFGFLLDAFAFG 528

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            PPHGGIA G DRIV LL G +++R+V  FP S    D L  +P+ ++ +Q +E G+
Sbjct: 529 APPHGGIAFGWDRIVSLLGGYESIRDVIAFPKSGGGVDPLTEAPAPITAQQRKEAGI 585


>gi|319902143|ref|YP_004161871.1| aspartyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319417174|gb|ADV44285.1| aspartyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 585

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 228/598 (38%), Positives = 340/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            YR+H+CG+L +SD+   V L+GWV R R  GG+ F+D+RD YGITQ+V N +      E
Sbjct: 1   MYRSHTCGELRISDINKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNSELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ I G V  R ++  N NI TG IE+   ++ +L+ +   P  +    + 
Sbjct: 61  RANRLGREFVIRITGSVNERFSK--NKNIPTGDIEIIVSELNVLNSSLTPPFTIEENTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  +  N+  R ++   +R  + ++ FIE  TPIL  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDDI+N  E + + +F+E  +   ++  FLR+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQDDIINLFEGMAKYLFKEIRDVE-LTEPFLRMPWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     V                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDIMKGHGFSVFDNAAYVGG-----ICAEGAASYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADAR 417
              R++  G+V     V K       + ++     + GD    ++G D +K      + R
Sbjct: 352 A--RIEADGSVK--SSVDKFYTQEVLQEMKSAFGAKPGDLILILSGEDVMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  ++
Sbjct: 408 LEVAGQLGLRDKNKFALLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+VCNG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAQEQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL L +    
Sbjct: 528 GLAYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSVIDQKQLDELNLIVAVKE 585


>gi|291541881|emb|CBL14991.1| aspartyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 592

 Score =  603 bits (1556), Expect = e-170,   Method: Composition-based stats.
 Identities = 228/595 (38%), Positives = 332/595 (55%), Gaps = 13/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
             RT  CGDL + DVG  V + GWV R R  G +IF+D+RD  GI Q+  N   D   F+
Sbjct: 8   MKRTDYCGDLRIGDVGREVTVCGWVQRCRDLGQLIFIDLRDRTGIVQLAFNDKTDKEIFD 67

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A S RSE+VL   G+V  RS++  N+ I TG IE+    + +LS A+  P  +  +   
Sbjct: 68  KAFSCRSEFVLAAKGVVCERSSK--NSEIPTGDIEVVVSDMRVLSKAQTPPFEIVDDTNT 125

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  L  N++ R++I    R       F+E  TP++  S+PEGARD+
Sbjct: 126 NEELRLKYRYLDLRRRPLLNNLMMRSKIAKVARDYFHDNGFVEIETPMMIKSTPEGARDY 185

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQ+PQ YKQLLM SGFDRY Q+A CFRDED R+DR P EF Q+DME
Sbjct: 186 LVPSRIHNGKFYALPQSPQIYKQLLMLSGFDRYIQLARCFRDEDLRADRQP-EFTQIDME 244

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ D+IL   E   + +F+E  N + +  +F R+ Y +A+  YG+DKPD+R  + + 
Sbjct: 245 LSFVDVDEILEINEGFFKKLFKEVLNID-LEEHFQRMTYKEAMESYGSDKPDIRFDMKIQ 303

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++      F VF+  +                   R   D++ E+A+  G  GLAY+ 
Sbjct: 304 DISDLVKDCGFSVFTSAIENGGSVRAIVAKNASSVYTRKEIDKLTEYAKGIGAKGLAYVR 363

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           W               K ++     AI  RL  + GD    +A       S     R  +
Sbjct: 364 WVD------EPNASFKKFMSEEELSAIYERLGAEKGDVILIVADKNSTVLSTLGALRLVV 417

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ L II  + F+F WI+DFPF+E++EE  +    H+PFTMP+         D   + A 
Sbjct: 418 AKRLDII-PDVFKFLWIVDFPFFEYDEESGEWLAMHHPFTMPKEECLQYLDTDPSKVIAK 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDL  NG E++SG +R    E+  + F  + ++ E +E +FG L  A++ G PPHGG+ 
Sbjct: 477 AYDLTLNGVELSSGSMRITDYELQQKMFKALKLTDEEIEAKFGFLVEAYKYGAPPHGGMG 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+DR+ ML+  A ++R+V+ FP  QN  +L+   P+ V  E L  LG+++V   
Sbjct: 537 IGLDRVTMLMCKADSLRDVTAFPKVQNASELMSACPAEVDDESLEVLGIKVVNKE 591


>gi|223932851|ref|ZP_03624847.1| aspartyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|330833744|ref|YP_004402569.1| aspartyl-tRNA synthetase [Streptococcus suis ST3]
 gi|223898432|gb|EEF64797.1| aspartyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|329307967|gb|AEB82383.1| aspartyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 583

 Score =  603 bits (1556), Expect = e-170,   Method: Composition-based stats.
 Identities = 234/593 (39%), Positives = 346/593 (58%), Gaps = 17/593 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    VG  + L GWV R R  GG+IF+D+RD  GI Q+V NP+S   E+ 
Sbjct: 1   MKRSMYAGRVRKEHVGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPESVEAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V+ R  E  N NI TG +EL    + +L+ A+  P  +    E
Sbjct: 61  AKAESLRSEFVIEVTGTVVER--EQANDNIPTGAVELQVTSLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  +  N   R  + +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 ASDDTRLRYRYLDLRRPEMLNNFKLRAAVTHSIRNYLDELEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV++G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V ++    + V+  F R+ YD A+  YG+DKPD R  +++
Sbjct: 238 ETSFLNEVEIQDIVEGLIAKVLKDTKGID-VTLPFPRMAYDHAMNFYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ ++A+  G  GLA++
Sbjct: 297 QDLTELVKEVDFKVFSEA----PVVKAIVVKGAADCYSRKDIDKLTDYAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                + G +A  GPVAK L  + TE +   L ++D D   F+A +     +     RN 
Sbjct: 353 KV---DKGELA--GPVAKFLTGI-TENLTASLQLEDKDLVLFVADELEVANNTLGALRNR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+E G+I+ + F F WI+D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 LAKEQGLIDESKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTEETAHHLDGDLAQVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDMQERMFKALGFSAEDAHEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR VMLL G  N+REV  FP +    D +  +PSTV+  QL EL L I 
Sbjct: 527 AIGLDRFVMLLAGEDNIREVIAFPKNNKASDPMTQAPSTVASAQLEELALNIT 579


>gi|145219859|ref|YP_001130568.1| aspartyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|189082135|sp|A4SF07|SYD_PROVI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145206023|gb|ABP37066.1| aspartyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 602

 Score =  603 bits (1556), Expect = e-170,   Method: Composition-based stats.
 Identities = 284/597 (47%), Positives = 391/597 (65%), Gaps = 9/597 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFE 60
           +R+RTH CG LG       V L+GWVHR+R HGG++F+D+RDH GI Q+V  P+    FE
Sbjct: 13  NRFRTHYCGSLGPVLQQEKVSLAGWVHRIRDHGGLVFIDLRDHTGICQLVIQPEEKELFE 72

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  + +E V+ I+G V+ RS ET+NA + +G IE+    + + S A  LP PV  E   
Sbjct: 73  QASHLHAESVIAIEGSVVLRSPETVNARLASGAIEVVVSALTVESNARPLPFPVADELPT 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRF+DLRR+ +H+NI+ R+R+ +++R  +   +F+E  TPILT+SSPEGARDF
Sbjct: 133 SEELRLKYRFIDLRREKIHENIIFRSRVSSAIRRYLEERDFVEIQTPILTSSSPEGARDF 192

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GF RYFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFPRYFQIAPCFRDEDARADRSPGEFYQLDME 252

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQDD+   +E + R +    S     +  F RI Y D + R+GTDKPDLR P+ + 
Sbjct: 253 MAFIEQDDLFEILEGMFRHLVTSMSKKRITAFPFPRISYRDVMNRFGTDKPDLRIPLEIA 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT  FV+S F+VF+   +         +    G  +R F D+  + A+  G  GLAYI 
Sbjct: 313 DVTPLFVNSGFKVFA-ANTKEGCAVKALVLKGRGTESRLFYDKAEKRAKELGSAGLAYIQ 371

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +R          GP+ K ++     +++ +L ++ GD  FF AG     C      R + 
Sbjct: 372 FR-----EEGLKGPIVKFMSEGEIASMKEQLSLETGDVVFFAAGKWEAACRIMGGMRTYF 426

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             EL  ++ +   FCWI+DFP YE+NEE  KIDF+HNPF+MPQG ME+L+  D L + A+
Sbjct: 427 G-ELFTLDHDELSFCWIVDFPMYEYNEEAGKIDFSHNPFSMPQGEMEALETMDPLELLAY 485

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  ++M +AF   G SKE V+ RFG +  AF+ G PPHGGIA
Sbjct: 486 QYDIVCNGIELSSGAIRNHRPDIMYRAFEIAGYSKEDVDLRFGHMIEAFKLGAPPHGGIA 545

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VM+L   +N+REV  FPM+Q   DL+M +PS V+  QLREL +++ + PK+
Sbjct: 546 PGLDRLVMILRDEQNIREVIAFPMNQQAEDLMMSAPSEVTTAQLRELHIKL-DLPKE 601


>gi|223940159|ref|ZP_03632021.1| aspartyl-tRNA synthetase [bacterium Ellin514]
 gi|223891176|gb|EEF57675.1| aspartyl-tRNA synthetase [bacterium Ellin514]
          Length = 601

 Score =  603 bits (1556), Expect = e-170,   Method: Composition-based stats.
 Identities = 229/608 (37%), Positives = 340/608 (55%), Gaps = 22/608 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACF 59
             RTH C +L  + +G  V LSGWVH  R  GG+IF+DIRD  G TQ V +P       F
Sbjct: 1   MKRTHHCNELRPAHIGQTVTLSGWVHSRRDLGGLIFIDIRDREGRTQTVFDPSDLPKDLF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER- 118
           + A S+RSE V+ + G V  R A T N  I TG++E+    +E+L++AE LP PV     
Sbjct: 61  DRAASLRSECVISVTGKVRQRPAGTNNPKIPTGEVEVGVTALEVLNMAEVLPFPVDDPEV 120

Query: 119 --EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             +  E +R +YR+LDLRR  + +N+  R+++  + R  M  + F+E  TP L  S+PEG
Sbjct: 121 AAKVNEELRLQYRYLDLRRPEMARNLRLRSKVATATRVFMDEQGFLEVETPTLFKSTPEG 180

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR+FLVP+R   G+FYALPQ+PQQ+KQ+LM SG +RYFQ+A C+RDED R+DR P EF Q
Sbjct: 181 AREFLVPNRREPGTFYALPQSPQQFKQILMVSGVERYFQLARCYRDEDLRADRQP-EFTQ 239

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +D+EMSF++++DI + +E +L+ V++   N +     F RI +++A+ RYG DKPD R  
Sbjct: 240 VDIEMSFIDREDIYSLIEGLLKRVWKTALNMDI-PTPFKRISFEEALNRYGIDKPDTRIG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           + + + TE F  S F+VFS  ++     +                + M E+A+S G  GL
Sbjct: 299 MELVDFTEEFRASTFKVFSGAIANGGVVKALNAKGLADATQ-GQIETMTEYAKSFGAKGL 357

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I     E        P+ K  N     A+  +L +++GD   F A   L  C      
Sbjct: 358 AFIKVEKGE-----WKSPIVKFFNEAEKVALTQKLGIEEGDLILFAADQWLTACEILGKI 412

Query: 417 RNHIAQ------ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           R + A       +L  I  + F+F W+++FP   +++E+ +   +H+PFT P      L 
Sbjct: 413 RLYCADVQKAKGKL-TIPADRFDFLWVVEFPLLSFDKEQNRWYSSHHPFTAPVADDIPLL 471

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV-ENRFGGLYRAF 529
             D   ++   YD+V NG E+  G IR H  +V    F  V      + + RFG +  AF
Sbjct: 472 KTDPKKVRGQHYDVVVNGVELGGGSIRIHQPDVQKTIFEEVLQIPPEMVKARFGYMLEAF 531

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGGIA G DR++ +L G  ++R+V  FP +    DL+  SP+ V  +QLR+L L
Sbjct: 532 RYGAPPHGGIALGFDRLIAILCGTPSIRDVIAFPKTAKGTDLMTDSPAPVEPKQLRDLHL 591

Query: 590 RIVENPKK 597
            +    K+
Sbjct: 592 ELKVPKKE 599


>gi|315221547|ref|ZP_07863467.1| aspartyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315189381|gb|EFU23076.1| aspartyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 580

 Score =  603 bits (1556), Expect = e-170,   Method: Composition-based stats.
 Identities = 231/593 (38%), Positives = 343/593 (57%), Gaps = 17/593 (2%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKS 64
             G +    VG  + L GWV R R  GG+IF+D+RD  GI Q+V NP   D    EIA+S
Sbjct: 2   YAGRVRSEHVGQEITLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPENVDKEVMEIAES 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+ + G V +R+    N  + TG +EL  + + +L+ A+  P  +    E  +  
Sbjct: 62  LRSEYVIEVTGKVEART--QANDKLATGTVELHVENLTVLNTAKTTPFEIKDGIEANDDT 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR  +  N+  R ++ +S+R  +    FI+  TP LT S+PEGARD+LVPS
Sbjct: 120 RLRYRYLDLRRPEMLANLKLRAKVTHSIRNYLDELEFIDVETPFLTKSTPEGARDYLVPS 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E SF+
Sbjct: 180 RVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLETSFL 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++ ++T+
Sbjct: 239 SDQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFEMLLQDLTD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                +F+VFS+     P  +   +       +R   D++ E A+  G  GLA++     
Sbjct: 298 LVKGIDFKVFSEA----PAVKAIVVKNAADSYSRKDIDKLTEQAKQYGAKGLAWVKVASG 353

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E       GPVAK L  + T  +   L ++D D   F+A       +     R  +A+EL
Sbjct: 354 ELN-----GPVAKFLKGL-TSDLTDALQLEDNDLVLFVADTLEIANAALGALRIRLAKEL 407

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G+I+ + F + W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A  YD+
Sbjct: 408 GLIDESKFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQADTAHELEGDLSRVRAIAYDI 467

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG+E+  G +R +  ++  + F  +G S+E   ++FG L  A   G PPHGG+A G+D
Sbjct: 468 VLNGYELGGGSLRINHKDLQERMFKALGFSEEEATDQFGFLLEAMDYGFPPHGGLAIGLD 527

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           R VMLL G +N+REV  FP +    D +  +PS V  +QL EL L++  + +K
Sbjct: 528 RFVMLLAGEENIREVIAFPKNNKASDPMTQAPSIVDAKQLEELSLQVETHEEK 580


>gi|227544925|ref|ZP_03974974.1| aspartate--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300910047|ref|ZP_07127507.1| aspartate--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185092|gb|EEI65163.1| aspartate--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300892695|gb|EFK86055.1| aspartate--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 600

 Score =  603 bits (1556), Expect = e-170,   Method: Composition-based stats.
 Identities = 219/596 (36%), Positives = 333/596 (55%), Gaps = 12/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
             RT+  GD     VG  V L GWV + R  GG+IF+D+ D  GI Q+V N       FE
Sbjct: 1   MKRTNYAGDTNEQQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKENPEAFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA +VR+++VL + G V  R+ + IN ++ TG++E++  K+++L+ +E  P  +    + 
Sbjct: 61  IANAVRNQYVLEVQGKVQLRAEKEINPDMKTGKVEVAVDKVKVLAKSETTPFDITDGVDA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + +N+  R+++ + +      E F++  TP LT S+PEGARD+
Sbjct: 121 SEDLRMKYRYLDLRRPEMMRNLKLRSKVASIVHNYYDNEGFMDVETPDLTRSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSRV  G FYALPQ+PQ +KQLLMA+G D+Y+Q+A CFRDED R DR P EF Q+D E
Sbjct: 181 IVPSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQP-EFTQIDTE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF   +DI    E +++ V +E    + V   F R+ + +A+ +YG+DKPD R  +++H
Sbjct: 240 MSFATPEDIQTVTEGLIKRVMKEIVGVD-VKTPFPRMEWQEAMDKYGSDKPDTRFGMLIH 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++    S F+VF+  ++         +P      +R    +  E+ +  G  GLA++ 
Sbjct: 299 DLSDIVKDSSFKVFANTVADGNYVRAIRVPGGADKYSRKDISKYEEYIKRFGAKGLAWVK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GPVAK LN      I   +D ++GD   F+AG            R  I
Sbjct: 359 VTAD-----GYNGPVAKFLND-QVAQINEEMDAKEGDLILFVAGSFHVVSDSLGYLRRTI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+EL +I  + + + W++++P +E++E   K   AH+PFTM             D     
Sbjct: 413 AEELDMIKPDQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAH 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD++ NG EI  G IR H  ++  +    +G +KE  E RFG L +A   GMPP GG
Sbjct: 473 AQSYDIILNGNEIGGGSIRIHDPKIQEKVLKALGYTKERAEARFGFLLKALTMGMPPEGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL  A ++R+V  FP +    + L  +P  VS +QL +L +   E 
Sbjct: 533 LAFGLDRWVMLLAQADSIRDVIPFPKNSKAVEPLTAAPGKVSEQQLDDLKIEFDEK 588


>gi|318040800|ref|ZP_07972756.1| aspartyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 609

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 221/613 (36%), Positives = 340/613 (55%), Gaps = 26/613 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           R+H CGDL     G  V+L GWV R R HGG+IF+D+RD  G  Q+  +PD+    F +A
Sbjct: 2   RSHGCGDLRPDATGQAVQLCGWVDRSRDHGGVIFIDLRDRSGTVQITVDPDNGAEMFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           + +R+E V+ ++G V  R  + IN  + TG++E+ A  I +L+  +      + V  E  
Sbjct: 62  EHLRNETVIQVEGKVRERPTDAINEKLATGRVEVLASAITVLNSVKGNLPFAVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR+ ++ N+  R + I + R  +  + FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRERMNSNLRLRAQTIQAARRFLEDQGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLDM
Sbjct: 182 YLVPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q+ IL   E+++  +++       +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQEQILELNESLIASIWKTVKGVE-LPRPFPRLTWHDAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
            NV++      F+VFS  ++     +  A+P      +         +   A+  G  GL
Sbjct: 300 TNVSDLVADMGFKVFSGAVAAGGSVKCIAVPGGNDAVSNVRIKPGGDVFSEAQKAGAGGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  R+ E G +  +G +  +L+      +  R   + G    F AGD           
Sbjct: 360 AFI--RVREGGEIDTIGAIKDNLSEEKKAELLQRTGAEPGTLILFGAGDTATVNKALDRV 417

Query: 417 RNHIAQELGIINCNC----FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
           R ++A+ELG++  +     + F W++DFP +E+N +E + +  H+PF  P        GN
Sbjct: 418 RQYLARELGMVKPDSENDSWNFLWVVDFPMFEFNADENRYEALHHPFCAPNTDD---LGN 474

Query: 473 DLLS-------IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
           D  +        +A  YDLV NG E+  G +R H S +  Q    VG+  E    +FG L
Sbjct: 475 DPSAWADTLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEANQQFGFL 534

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             A   G PPHGG+A G+DR+VMLL G +++R+   FP +Q    L+ G+P  V+ +QL 
Sbjct: 535 MEALDMGAPPHGGLAFGLDRMVMLLAGEESIRDTIAFPKTQQARCLMTGAPGGVATKQLE 594

Query: 586 ELGLRIVENPKKI 598
           EL +      ++ 
Sbjct: 595 ELHVASTWVEEEA 607


>gi|331269255|ref|YP_004395747.1| aspartyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125805|gb|AEB75750.1| aspartyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 591

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 339/593 (57%), Gaps = 13/593 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG+L  S +G    + GWV R R  GG++F+D+RD  GI QVV     +   FE 
Sbjct: 9   KRTVMCGELRESHIGQKHVVMGWVQRKRNLGGLVFVDLRDREGILQVVFGEEINKEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  V+ E+ + ++G ++ R   + N  + TG +EL  Q I+ILS +E  P+ +  + +  
Sbjct: 69  ADLVKPEYCIAVEGELVKRQ--SPNETLPTGMVELKGQNIKILSESETPPIYIKEDLDTD 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  +      R +    +R  +    F+E  TP+LT S+PEGARD+L
Sbjct: 127 EAVRLKYRYLDLRRPDMQNIFKVRHKTAKVIRDFLDQNGFLEMETPMLTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQ+PQ +KQLLM SG+DRYFQI  CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYPGMFYALPQSPQLFKQLLMVSGYDRYFQITKCFRDEDLRANRQP-EFTQVDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ +D+++  E +++ VF+E ++ + V     RI Y +A+ +YG+DKPDLR  + +++
Sbjct: 246 SFVDMEDVISLNERLIKKVFKEIADVD-VKLPIQRITYKEAMDKYGSDKPDLRFGMEIND 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F+VF   +           P   G G R   D++ E+ ++    GLA+I +
Sbjct: 305 ITDAVKDVDFKVFKDAIENGGSVRAIKAPNCAGMG-RKQIDKLGEFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE        P++K L      ++  +LD + GD    +A             R  +A
Sbjct: 364 KEDE-----IKSPISKFLQEEGMNSVIEKLDAKVGDLILIVADKDSVVLQALGALRLEMA 418

Query: 422 QELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           + L I+  N  F F W+ +FP   +NEEE +    H+PFTMP         +D   ++A 
Sbjct: 419 KRLEILKDNKEFRFAWVTEFPLLSYNEEENRYQAEHHPFTMPMDEDIEYLESDPGRVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F+ +G + E    RFG L  AF+ G PPHGG+A
Sbjct: 479 AYDIVLNGEELGGGSIRIHDTKLQEKMFNVLGFTSESAWERFGFLLEAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G DR++M L G +N+++V  FP +QN    L  +P+ V  +QL ELG+ + +
Sbjct: 539 YGFDRMIMFLAGTENIKDVIAFPKNQNAYCPLTEAPNVVDEKQLGELGISLKK 591


>gi|322374025|ref|ZP_08048559.1| aspartate--tRNA ligase [Streptococcus sp. C150]
 gi|321276991|gb|EFX54062.1| aspartate--tRNA ligase [Streptococcus sp. C150]
          Length = 583

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 228/592 (38%), Positives = 345/592 (58%), Gaps = 17/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACF 59
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP   D+A  
Sbjct: 1   MKRSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENADAAVV 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A+S+RSE+V+ + G V +R  E  N N+ TG +EL  + ++IL+ A+  P  +    E
Sbjct: 61  ETAESLRSEFVIEVTGTVEAR--EQANDNLPTGAVELKVEDLKILNTAKTTPFEIKDGVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +++R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 ASDDTRMRYRYLDLRRPEMLENFKLRAKVTHAIRNYLDDLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E    N V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLNEQEIQDITEGLIAKVMKETKGIN-VTLQFPRMSYDDAMNNYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T+     +F+VF++     P  +   +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTDIVKGVDFKVFAEA----PAVKAIVVKGNADKYSRKSIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                        GPVAK L  +  + +   L +++ D   F+A       +     RN 
Sbjct: 353 KMTDGA-----LAGPVAKFLTSIEGK-LTDALQLEENDLVLFVADTLEVANNTLGALRNQ 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +I+   F F W++D+P +EW+EEE +   AH+PFT+P     S    DL  ++A
Sbjct: 407 IAKELDMIDTTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEESASNLEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  +    +G S+E    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINHKDLQERMLKALGFSEESAYEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL L +
Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHV 578


>gi|333004719|gb|EGK24242.1| aspartyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333018440|gb|EGK37738.1| aspartyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 573

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 213/576 (36%), Positives = 320/576 (55%), Gaps = 7/576 (1%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGLVMSR 80
            L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G V +R
Sbjct: 2   TLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRAR 61

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             + IN ++ TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR  + +
Sbjct: 62  DEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRPEMAQ 119

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
            +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ 
Sbjct: 120 RLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQL 179

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R +
Sbjct: 180 FKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHL 238

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
           + E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + 
Sbjct: 239 WLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAND 296

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
             G         G    R   D    + +  G  GLAYI       G      PVAK LN
Sbjct: 297 PKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLN 356

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
               EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W++DF
Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALRLKVGKDLGLTDESKWAPLWVIDF 416

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H 
Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHN 475

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V 
Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 571


>gi|313820478|gb|EFS58192.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313822716|gb|EFS60430.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
          Length = 609

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 227/607 (37%), Positives = 329/607 (54%), Gaps = 23/607 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++       +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKIIG--VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF         Y    +   G    R   D   EWAR++G  GLAYI     
Sbjct: 300 FFANTAFRVFQAP------YVGAVVMPGGASLPRRQFDAWQEWARTRGAKGLAYITI--- 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            S      GPVAK+++      I  ++  + GD+ FF AG           AR  I +  
Sbjct: 351 -SDEGVPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P ++  +E                 H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G+     
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAGVDAKPK 589

Query: 595 PKKILKI 601
               +K 
Sbjct: 590 KPSAVKP 596


>gi|310778225|ref|YP_003966558.1| aspartyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747548|gb|ADO82210.1| aspartyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 591

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 226/598 (37%), Positives = 343/598 (57%), Gaps = 13/598 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61
           YRTH+ G+L   D+   V LSGWV   R  GG+ F+D+RD  G+TQ++ NP+      E 
Sbjct: 3   YRTHNLGELRKEDITKKVTLSGWVATKRDLGGLTFIDLRDREGVTQIIFNPEENADLAEK 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           ++ +R+E V+ I G V  R ++  N N+ TG IE+  +++EIL+  + LP  + GE    
Sbjct: 63  SQKIRTEAVIKITGEVRERYSK--NPNMPTGDIEVFVEELEILNNCDVLPFQISGEENLS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLR+  + +N+  R +++ ++R  M  + F++  TPILT S+PEGARDFL
Sbjct: 121 ENMRLKYRYLDLRKPKMTRNLKMRHKMLMAIRNYMDEKGFLDVDTPILTKSTPEGARDFL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR N+G FYALPQ+PQ +KQLLM SG +RY+QIA CFRDED R+DR P EF QLD+EM
Sbjct: 181 VPSRTNEGDFYALPQSPQLFKQLLMISGVERYYQIAKCFRDEDLRADRQP-EFTQLDIEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE +D++N +E + + VF+  +        F R+ Y +A+ R+G+DKPD+R  + +  
Sbjct: 240 SFVEMEDVINEIEGLAKRVFQSVTE-EAADYEFQRMEYAEAMERFGSDKPDIRFGVELKE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYIF 360
           +T+   +  F+ FS + +     +    P      +R       ++ ++  G  GLA+I 
Sbjct: 299 LTDIMKNCGFKAFSGVANSGGLVKAVVAPGSAENFSRKVLGEYEDYVKTYFGAKGLAWIK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                        P+AK  +      I  R     GD    +A             R  +
Sbjct: 359 VT-----EEGVNSPIAKFFSEEEIATILARTGAVAGDVIMILADRAKVVYDGLGALRLKL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKA 479
            ++L +IN + ++F WI+DFP +EW+EEE++    H+PFT  +   M++    ++  ++ 
Sbjct: 414 GKDLDLINNDEYKFLWIVDFPMFEWSEEEERYKAQHHPFTSIKAEDMDAFMTGEMDKVRT 473

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H  EV  + F  +G+S+E    +FG    AF+ G PPHGG+
Sbjct: 474 NSYDLVLNGAEIGGGSIRIHNPEVQAKVFERLGLSEEEAREKFGFFIDAFKYGAPPHGGL 533

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A GIDR +M++L   ++R+V  FP +     L+  +PS V   QL EL L+    P K
Sbjct: 534 AFGIDRWLMVMLKESSIRDVIPFPKTNKGQCLMTEAPSKVEDGQLEELYLKSTYIPVK 591


>gi|50842655|ref|YP_055882.1| aspartyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|62287550|sp|Q6A8J1|SYD_PROAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|50840257|gb|AAT82924.1| aspartyl-tRNA synthetase [Propionibacterium acnes KPA171202]
          Length = 606

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 226/601 (37%), Positives = 327/601 (54%), Gaps = 23/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKGVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++       +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKIIG--VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF         Y    +   G    R   D   EWAR++G  GLAYI     
Sbjct: 300 FFANTAFRVFQAP------YVGAVVMPGGASLPRRQFDAWQEWARTRGAKGLAYITI--- 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            S      GPVAK+++      I  ++  + GD+ FF AG           AR  I +  
Sbjct: 351 -SDEGVPEGPVAKNISEEEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P ++  +E                 H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G+     
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAGVDAKPK 589

Query: 595 P 595
            
Sbjct: 590 E 590


>gi|309789262|ref|ZP_07683855.1| aspartyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308923016|gb|EFP68530.1| aspartyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 573

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 213/576 (36%), Positives = 320/576 (55%), Gaps = 7/576 (1%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGLVMSR 80
            L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G V +R
Sbjct: 2   TLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRAR 61

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             + IN ++ TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR  + +
Sbjct: 62  DEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRPEMAQ 119

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
            +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ 
Sbjct: 120 RLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQL 179

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R +
Sbjct: 180 FKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHL 238

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
           + E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + 
Sbjct: 239 WLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAND 296

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
             G         G    R   D    + +  G  GLAYI       G      PVAK LN
Sbjct: 297 LKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLN 356

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
               EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W++DF
Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDF 416

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H 
Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHN 475

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V 
Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 571


>gi|154482689|ref|ZP_02025137.1| hypothetical protein EUBVEN_00365 [Eubacterium ventriosum ATCC
           27560]
 gi|149736465|gb|EDM52351.1| hypothetical protein EUBVEN_00365 [Eubacterium ventriosum ATCC
           27560]
          Length = 596

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 347/595 (58%), Gaps = 9/595 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIA 62
           +R+H C ++   ++G  V + GWV + R  G +IF+D+RD  G+ Q+V + ++   FE A
Sbjct: 9   HRSHRCTEVSNKNIGETVTVMGWVQKRRNLGSLIFIDLRDRSGLLQLVFDENNGEVFEKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K++RSE+V+  +G+V  RS   +N N+ TG IE++   + ILS AE  P PV  +    E
Sbjct: 69  KNLRSEFVIAAEGVVRQRSG-AVNENMATGDIEVTVNTLRILSEAETPPFPVEEDANTRE 127

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR+  L +N+  R+ I   +R  M  E FIE  TP L  S+PEGARD+LV
Sbjct: 128 ELRLKYRYLDLRKPHLQRNLKMRSDITTFIRKFMSNEGFIEIETPTLCKSTPEGARDYLV 187

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ YKQLLM SGFDRY QIA C+RDED R+DR P EF Q+DME+S
Sbjct: 188 PSRVHPGCFYALPQSPQLYKQLLMCSGFDRYIQIAKCYRDEDLRADRQP-EFTQVDMELS 246

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ DD+++  E +L+ +F+E  + + V     R+ + +A+ RYG+DKPD R  + + +V
Sbjct: 247 FVDVDDVIDVNERLLKALFKEILDVD-VQLPIQRMTWIEAMNRYGSDKPDTRFGMELIDV 305

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+      F VF+  +          +  +G    R   D++ + A+  G  GLAYI   
Sbjct: 306 TDVVKGCGFGVFTGTIENGGSVRGLNVKGQG-AMPRKKIDKLVDSAKGNGAKGLAYIA-- 362

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G +      AK +     + +   +D Q GD   F A       +     R  +A+
Sbjct: 363 MHEDGTIK--SSFAKFMTDEEMDNLIKAMDGQPGDLLVFAADKNKIVWNVLGALRLELAE 420

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +I+ + F F W+++FP +EW++E+ +    H+PFTMP         +D   ++A  Y
Sbjct: 421 QLDLIDKSKFNFLWVVEFPQFEWSDEQNRFLAMHHPFTMPMDEDLDYIESDPGRVRAKAY 480

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG EI  G +R H ++V  +    +G + E    +FG L  AF+ G+PPH G+A G
Sbjct: 481 DIVLNGSEIGGGSVRIHQADVQERMLKALGFTTEAAHEQFGFLLDAFKYGVPPHAGLAYG 540

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VM + G  N+REV  FP  ++   L+  +P+ V  +QL EL +  ++  ++
Sbjct: 541 LDRLVMHMTGEDNIREVIAFPKVKDASCLMTEAPTAVDAKQLEELSIETIDVEEE 595


>gi|332686837|ref|YP_004456611.1| aspartyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332370846|dbj|BAK21802.1| aspartyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 588

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 228/593 (38%), Positives = 335/593 (56%), Gaps = 10/593 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             RT  CGD+    +   + L GWV + R  GG+IF+D+RD  GI QVV NP   +  FE
Sbjct: 1   MKRTIYCGDVTEKYLDKEIILKGWVQKRRDLGGLIFIDLRDREGIIQVVFNPKFSTTAFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA   RSE+V+ I G V+ R A  IN  + T ++E+ A  + IL+ A   P+ +    + 
Sbjct: 61  IANKCRSEYVIEITGKVVYREANAINPKMKTDKVEVVATSVTILNEAITTPILIDDNEKV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + KNI  R ++  ++R  +    FI+  TP L  SSPEGARD+
Sbjct: 121 NDELRLKYRYLDLRRPKMTKNIKLRHQVTKAIRNYLDDNAFIDIETPYLAKSSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQ+PQ +KQLLM +GFDRY+Q+  CFRDED R DR P EF Q+D+E
Sbjct: 181 LVPSRIHAGHFYALPQSPQIFKQLLMGAGFDRYYQLVRCFRDEDLRGDRQP-EFTQVDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            +F+  ++I    E ++  V +E      V+  F RI YD+A+ R+G+DKPD R  + + 
Sbjct: 240 TTFLTAEEIQTMTEEMIERVMKETKGIE-VTLPFPRISYDEAMARFGSDKPDTRFGMELI 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++ +     +F+VF  +L      +           +R   D +   A   G  GLA++ 
Sbjct: 299 DIIDIAQKIDFKVFKSVLENGGQVKALNAKGAASKYSRKDLDHLAHDAEQYGAKGLAWVK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+AK L    ++ +  ++  Q GD   F+A  P    +     R+  
Sbjct: 359 VEED-----GLKGPIAKFLMD-VSDELIQKMSAQTGDLLIFVADTPNVVAATLGAMRSRF 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +I+ + F F W++D+P +E++EE+ +   AH+PFT PQ        ND   + A 
Sbjct: 413 GRELEMIDESAFNFLWVVDWPLFEYSEEQDRYIAAHHPFTQPQAQDIQWLLNDPEKVYAE 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R +  E+  + F  +G + EV E +FG L  A   G PPHGGIA
Sbjct: 473 AYDIVLNGYELGGGSLRIYQRELQEKMFEALGFTNEVAEEQFGYLLEALTYGFPPHGGIA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR VMLL G +N+REV  FP +    D +  +PS VS EQL EL L +++
Sbjct: 533 LGLDRFVMLLAGEENIREVIAFPKNSKAADPMTNAPSLVSNEQLVELNLEVID 585


>gi|313885986|ref|ZP_07819724.1| aspartate--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312924516|gb|EFR35287.1| aspartate--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 580

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 234/593 (39%), Positives = 338/593 (56%), Gaps = 17/593 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YRTH+CG L  SD G  V L+GWV ++R  G + FLD+RD YGITQ+  +       + 
Sbjct: 1   MYRTHTCGALRASDEGQQVTLAGWVAKIRRMGAMTFLDLRDRYGITQIFFDESHQG--LL 58

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             V  EWVL + G V  RS  ++N  I TGQIE+ A ++E+L+ A+  P  +    +  +
Sbjct: 59  SEVGREWVLAVTGTVRLRS--SVNEKIPTGQIEILADRMEVLNRADTPPFTIEDVSDGGD 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +  NI  R R+    R  +   +F+E  TP+L  S+PEGARDF+V
Sbjct: 117 DLRMKYRYLDLRRRPVLSNIELRHRMTMETRRYLDGLHFLEIETPMLIGSTPEGARDFVV 176

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM +G DRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 177 PSRMNPGQFYALPQSPQTFKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 235

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDDIL+T E + + +F+E    + +     R+ + +A+ RYG+DKPDLR  + +  V
Sbjct: 236 FVEQDDILSTFEGLAKHLFKEIRGID-LPTPLRRMTWYEAMDRYGSDKPDLRFGMEIEEV 294

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAYIF 360
           TE      F V      +        +        R   D++ ++ +    G  GL ++ 
Sbjct: 295 TETIQGHGFGVVDSAAYIG-----AIVVTGKADYTRKQIDQLTDFVKRPQVGAKGLLWLR 349

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           ++ D            K L     +A+  +L MQ GD  F I+GD           R HI
Sbjct: 350 YQPDG----TMKSSFDKFLTADQLKALADKLSMQPGDIAFLISGDKRPAQKQLGTLRLHI 405

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ELG++    +E  W++DFP  EW+EE ++    H+PFT P+   +    +D  S++A 
Sbjct: 406 ASELGLMKPGQYECLWVVDFPLLEWDEETQRYYAMHHPFTAPKPEDQDRLESDPGSVRAD 465

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +E+  + F+ +G +KE  E +FG L  AF+ G PPHGGIA
Sbjct: 466 AYDMVINGVEVGGGSIRIHDAELQARVFAALGFTKERAEEQFGFLMNAFKYGAPPHGGIA 525

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR V L+    ++R+   FP + +  D+++ +P+ +  EQL EL L + E
Sbjct: 526 FGLDRWVSLMAELDSIRDCIAFPKNNSGRDVMIDAPARLDPEQLDELHLTVRE 578


>gi|307710175|ref|ZP_07646619.1| aspartyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619155|gb|EFN98287.1| aspartyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 587

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 234/596 (39%), Positives = 347/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  TTAESLRSEFVIEVTGQVAAR--EQANDKLPTGTVELNVTALTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T      +F+VFS+     P  +   +       +R   D+M E A+  G  GLA+I
Sbjct: 297 QDLTAVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVADGELN-----GPVAKFLTNIQAE-LTTALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETVHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L+I E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQIEEDE 582


>gi|301062998|ref|ZP_07203563.1| aspartate--tRNA ligase [delta proteobacterium NaphS2]
 gi|300442879|gb|EFK07079.1| aspartate--tRNA ligase [delta proteobacterium NaphS2]
          Length = 606

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 229/597 (38%), Positives = 341/597 (57%), Gaps = 9/597 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            R+H CG L   D+   + L GWV+R R  G +IF+D+RD  GITQVV +P  ++A  E 
Sbjct: 17  KRSHDCGSLRQQDIDREIILMGWVNRRRDLGNLIFIDLRDREGITQVVFDPQVNAAAHEK 76

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +R+EWVL + G V++R     N ++ TGQIE+ A +++IL+V E  P  V G  +  
Sbjct: 77  AHVLRNEWVLAVKGTVVARLEGQENRDLGTGQIEIRADEVKILNVTETPPFQVDGAVDAS 136

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+L+LRR  +  N  KR  I + +R  +    FIE  TP LT S+PEGARD+L
Sbjct: 137 ENLRLKYRYLELRRPQIFNNFKKRHAIASRIRTYLNERGFIEVETPFLTKSTPEGARDYL 196

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ +KQLLM SGFDRY+Q+  CFRDED R+DR P EF Q+D+EM
Sbjct: 197 VPSRVNTGMFYALPQSPQLFKQLLMMSGFDRYYQVVRCFRDEDLRADRQP-EFTQVDLEM 255

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +FV++ D+++  E ++  +F    +   +S+    + Y +A+ R+GTD+PDLR  + + N
Sbjct: 256 AFVDEKDVMDIFEGMMGELFTTIMDIE-LSSPIPHLTYQEAMDRFGTDRPDLRFDMELKN 314

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++   +S+F+VF  +++     +   +       +R   D ++  A + G  GLA+I  
Sbjct: 315 ISDIAENSDFKVFKGVVAAGGMVKAICVKQAANTYSRKALDDISLVATASGAKGLAWIKV 374

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             +         P+ K  +     AI  RLD   GD    +A  P    +     R  +A
Sbjct: 375 SEN-----TWQSPIGKFFDDEAKSAINTRLDAAPGDLILMVADQPRIANAAVGALRLEMA 429

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
               +IN + F F WI DFP  E+++E  +    H+PFT P          +   ++A  
Sbjct: 430 HREELINKDRFSFVWITDFPLLEYDDESDRFVAVHHPFTAPVAQDIGFLKENPGKVRARA 489

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H ++     F  +GI      ++FG L  A + G PPHGG+A 
Sbjct: 490 YDLVLNGSEIGGGSIRIHDAKTQEMVFDALGIPAREARSKFGFLIDALKHGAPPHGGMAL 549

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           G DR+V ++ G +++RE+  FP + +    L  +PS V  +QL+ELGLRI +  +K 
Sbjct: 550 GFDRLVAIMTGVRSIREIIAFPKTTSGTCPLTDAPSPVDPDQLKELGLRISQAKEKA 606


>gi|228471929|ref|ZP_04056698.1| aspartate--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276698|gb|EEK15406.1| aspartate--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 582

 Score =  603 bits (1554), Expect = e-170,   Method: Composition-based stats.
 Identities = 223/595 (37%), Positives = 336/595 (56%), Gaps = 19/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACF 59
            YRTH+CG+L +S     V LSGWV R+R  G +I++D+RD YGITQ++ +    D A F
Sbjct: 1   MYRTHTCGELRLSHEKQQVTLSGWVQRIRNKGFMIWVDLRDRYGITQLIFDEERTDKAVF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E AK++  E V+ I G V+ R A   N NI TG++E+    + +L+ +E  P  +    +
Sbjct: 61  EQAKTLSREDVIQIQGTVIKREAA--NTNIPTGEVEILVSALTLLNHSEIPPFTIEDNTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR  +  N++ R ++   +R  +  + FIE  TP+L  S+PEGARD
Sbjct: 119 GGEDLRMKYRYLDIRRTPVRDNLIFRHKVGMIVRNYLSGQGFIEVETPVLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNPGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVEQ+DI+ T E + + + +E       +  F R+ Y +A++ YG DKPD+R  +  
Sbjct: 238 EMSFVEQEDIIQTFEGLAKHLLKELKGLEFGA--FPRMTYAEAMKTYGNDKPDIRFGMKF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             + +   H +F+VF++   V                 R   D + EW +    G  GL 
Sbjct: 296 GELNDIAQHRDFKVFNEAELVVG-----IAVPGANSYTRKEIDTLVEWMKRPQIGATGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+    D     +    V K  N  + +A   R   Q GD    ++G   K     +  R
Sbjct: 351 YVKCNEDG----SFKSSVDKFYNEDDLKAWAERTGAQAGDLICILSGKANKVRGQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ LG+   + +   W++DFP  EW+EEE++    H+PFT P+     L  ++  ++
Sbjct: 407 MELAERLGLRKPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDSNPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG E+  G IR    E+  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 467 RANAYDLVLNGNEVGGGSIRIFNQELQAKMFELLGFTPEQAQAQFGFLMNAFKYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+A G DR+V LL G + +R+   FP + +  D+++ +PS +   QL+EL +++ 
Sbjct: 527 GLAFGFDRLVALLGGQETIRDFIAFPKNNSGRDVMIDAPSPIDEAQLKELAIQLA 581


>gi|309775570|ref|ZP_07670570.1| aspartate--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916664|gb|EFP62404.1| aspartate--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 581

 Score =  603 bits (1554), Expect = e-170,   Method: Composition-based stats.
 Identities = 221/591 (37%), Positives = 342/591 (57%), Gaps = 12/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L VSD G  V L GWV + R  G ++F+D+RD  GITQ+V   D    +  + 
Sbjct: 3   RTHTNGELRVSDAGKEVTLIGWVAKRRNFGALVFIDLRDRTGITQLVF--DEQLSDAIRD 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E++L   G+VM R  +  N  + TG IE+  Q++ I++ AE  P+ V  E +  E  
Sbjct: 61  VRNEYILEAKGIVMERKDK--NPKLATGDIEVQVQQVTIINRAETTPIIVADETDALEDT 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  + + ++ R +I +SMR  + ++ FIE  TP+L  S+PEGARD+LVPS
Sbjct: 119 RLKYRYLDLRRPQMQQKLILRHKITHSMREYLDSKAFIEIETPMLGRSTPEGARDYLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ GSFYALPQ+PQ YKQLLM SGF+RY+Q A CFRDED R+DR   +F Q+D+E SF+
Sbjct: 179 RVHPGSFYALPQSPQLYKQLLMVSGFERYYQFARCFRDEDLRADRQ-TDFTQVDLETSFL 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              +I   ME +L+ + ++    +  S  F R+ + +A+ RYG+DKPD R  + + ++TE
Sbjct: 238 SDVEIQTMMEEMLQKLMKDVKGKDI-SIPFPRLTWTEAMNRYGSDKPDNRFDLELQDITE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F H  F+VF+  ++     +   +P K G   R   D++ + A+  G  GL  + +   
Sbjct: 297 LFEHCGFKVFADCIAAKGSIKAVVVPGKAG-MTRKEIDKITDLAKKNGAKGLVTLKYL-- 353

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
             G ++  GP+ K L+     ++  RL+++D D    ++      C      RNH   EL
Sbjct: 354 -EGTLS--GPIVKFLSEEEIHSLTQRLELKDHDLVLIVSDAWRTTCEVLGVLRNHFGAEL 410

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G+   N F + W+ DFP +E++EE+ +    H+PFT P+         D   + A  YD+
Sbjct: 411 GLKKTNEFSYLWVTDFPMFEYSEEDGRWYAMHHPFTRPRDEDMQYIDTDPGKVHAIAYDV 470

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG+E+  G +R +   +  + F  +G ++E ++  FG    A + G PPHGG+A G+D
Sbjct: 471 VLNGYELGGGSLRIYDGAMQDKMFEVLGFTEEKIQENFGWFVDALKYGTPPHGGLAFGLD 530

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           RI M+L  + ++R+V  FP + N    +  +P+ V   QL EL + + E  
Sbjct: 531 RIAMILSESDSIRDVIAFPKNANAKCPMSDAPTPVDGAQLEELHIAVREEE 581


>gi|332071188|gb|EGI81683.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 587

 Score =  603 bits (1554), Expect = e-170,   Method: Composition-based stats.
 Identities = 232/596 (38%), Positives = 347/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F  + YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPHMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQ-EELTTALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|42524682|ref|NP_970062.1| hypothetical protein Bd3311 [Bdellovibrio bacteriovorus HD100]
 gi|62287568|sp|Q6MI59|SYD_BDEBA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|39576892|emb|CAE78121.1| aspS [Bdellovibrio bacteriovorus HD100]
          Length = 642

 Score =  603 bits (1554), Expect = e-170,   Method: Composition-based stats.
 Identities = 235/606 (38%), Positives = 353/606 (58%), Gaps = 13/606 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
            RTH CG LGVS  G  V L GWV   R HG ++F+D+RD  GI QVV +P+ A    +K
Sbjct: 46  KRTHYCGSLGVSQAGQKVVLMGWVDVRRDHGSLVFIDLRDREGIVQVVLDPNKAETASSK 105

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R E+VL ++G+V +R     NA I TG++E+ A + EIL+ +  +P     +    E 
Sbjct: 106 NLRGEFVLAVEGVVRARPDGMKNAKIKTGEVEVEAIRCEILNES-AVPPFQVSDTNVNEM 164

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLR   L  +++ R ++   +R  +    F+E  TPIL  S+PEGARD+LVP
Sbjct: 165 LRLKYRYLDLRSARLSSHLITRHKVAQLVRRFLSDNGFLEVETPILYKSTPEGARDYLVP 224

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRVN G FYALPQ+PQ  KQLLM SG+DRYFQIA CFRDED R+DR P EF Q+DMEMS+
Sbjct: 225 SRVNPGHFYALPQSPQTLKQLLMISGYDRYFQIARCFRDEDLRADRQP-EFSQIDMEMSY 283

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           ++Q+DI+   E +LR +++E    +  +    R+ Y +A+ RYG DKPD R  + + ++ 
Sbjct: 284 IDQEDIMEMNEKLLRTIWKEIKGIDVGA--IPRMTYQEAMDRYGIDKPDTRFGVEIKDLK 341

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
                S F+VF  +L+        A P KGG  +R   D++ + A+  G  GL +I  + 
Sbjct: 342 SIVTGSGFKVFDDVLARGGIVRGIAAP-KGGSYSRGQLDKLTDMAKRAGAKGLVWI--KS 398

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           +  G ++    V+K  +      +      + GD    +A D    C+  +  R H+ +E
Sbjct: 399 EADGTLS--SSVSKFFSPEKLAEMFKACGGEAGDCALVVADDYDTACAALSTLRLHLGRE 456

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI----KA 479
           L +I+ + ++F W++DFP  E++ +EK+    H+PFT P+        N+  +      A
Sbjct: 457 LNLIDNSKYKFLWVVDFPLLEYSPDEKRWVARHHPFTSPKDEFAQDLVNNNEAAYGKMLA 516

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLVCNG+E+  G IR + +E+    F  +G+S+E  +++FG    A + G PPHGGI
Sbjct: 517 KAYDLVCNGYEMGGGSIRIYRNEIQQAMFRLLGMSEEETQHKFGFFLEALKYGTPPHGGI 576

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           A G+DR+VMLL     +REV  FP +    DL+   PS V+ +QL E+G+R+    +K L
Sbjct: 577 AWGMDRLVMLLCETDAIREVIAFPKTAKATDLMSDCPSEVNRDQLAEVGVRLSTLAEKHL 636

Query: 600 KISVTT 605
           +    +
Sbjct: 637 EDLKKS 642


>gi|189499969|ref|YP_001959439.1| aspartyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|238692298|sp|B3EQ26|SYD_CHLPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189495410|gb|ACE03958.1| aspartyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 608

 Score =  603 bits (1554), Expect = e-170,   Method: Composition-based stats.
 Identities = 277/601 (46%), Positives = 391/601 (65%), Gaps = 9/601 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFE 60
           +R+R+H CG L        + ++GWVHR+R HGG+IF+D+RDH GI Q++  P+    F 
Sbjct: 13  NRFRSHFCGRLHTEFENKTIAVAGWVHRIRDHGGLIFIDLRDHTGICQLIIQPEKEELFR 72

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+++ +E V+C+ G+V+ RS ET+N  + +G+IE+  + I + S A  LP PV  E + 
Sbjct: 73  KAEALHTESVICVSGVVVRRSEETVNPRLASGEIEVVVEDIRVESNASPLPFPVADELQT 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR+ +H+NI  R+R+I+ +R  +   +F+E  TPILT+SSPEGARDF
Sbjct: 133 SEELRLKYRFLDLRREKIHENIHFRSRLISEVRRYLEERSFMEIQTPILTSSSPEGARDF 192

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQ+DME
Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFSRYFQIAPCFRDEDARADRSPGEFYQIDME 252

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQDD+   +E + + + E+ SN       F RI Y + + RYG+DKPDLR P+ + 
Sbjct: 253 MAFIEQDDLFEILEGMFKHLTEKMSNKRITQFPFPRISYKEVMNRYGSDKPDLRIPVEIE 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VTE FV+S F+VF+         +   +  +G   +R F D+    A+  G  GLAYI 
Sbjct: 313 DVTELFVNSSFKVFAGNTKEGNCIKAMVLKGRGNE-SRQFYDKAERRAKELGSAGLAYIQ 371

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           ++          GP+ K  +      ++ RL ++ GD  FF AG   + C      R + 
Sbjct: 372 YK-----EEGPKGPIVKFFSEDEMNDLKERLQIEAGDVVFFGAGKWERTCKIMGGMREYF 426

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           +    + + +   FCW++DFP YE++E  KKI+F+HNPF+MPQG ME+L+  D L I A+
Sbjct: 427 SDLFEL-DRDELSFCWVVDFPMYEYDEAAKKIEFSHNPFSMPQGEMEALETMDPLDILAY 485

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  ++M +AF   G  K  V+ RFG +  AF  G PPHGGIA
Sbjct: 486 QYDIVCNGIELSSGAIRNHRPDIMYRAFGIAGYEKAEVDKRFGHMIEAFNMGAPPHGGIA 545

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKKIL 599
            G+DR+VM+L   +N+REV  FPM+Q   DL+M +P+ VS  QLREL L++ +   +K  
Sbjct: 546 PGLDRLVMILRDEQNIREVIAFPMNQQAEDLMMAAPAEVSPLQLRELSLKLDLPKEEKKE 605

Query: 600 K 600
           K
Sbjct: 606 K 606


>gi|312870603|ref|ZP_07730717.1| aspartate--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311093878|gb|EFQ52208.1| aspartate--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 595

 Score =  603 bits (1554), Expect = e-170,   Method: Composition-based stats.
 Identities = 218/592 (36%), Positives = 331/592 (55%), Gaps = 12/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
             RT+  GD     VG  V L GWV + R  GG+IF+D+ D  GI Q+V N   +   F+
Sbjct: 1   MKRTNYAGDTNEQQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKGNPEVFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A +VR+++VL + G V  R+ + IN ++ TG++E++   I++L+ +E  P  +    + 
Sbjct: 61  VANAVRNQYVLEVHGKVQLRAEKEINPDMKTGKVEVAVDDIKVLAKSETTPFDITDNVDA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + KN+  R+++ + +      E F++  TP LT S+PEGARD+
Sbjct: 121 SEDLRMKYRYLDLRRPEMMKNLKLRSKVASIVHNYYDGEGFLDVETPDLTRSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSRV  G FYALPQ+PQ +KQLLMA+G D+Y+Q+A CFRDED R DR P EF Q+D E
Sbjct: 181 IVPSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQP-EFTQIDTE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF   +DI    E +++ V +E    + V   F R+ + +A+ +YG+DKPD R  +++H
Sbjct: 240 MSFATPEDIQTVTEGLIKRVMKEVKGID-VKTPFSRMEWQEAMDKYGSDKPDTRFGMLIH 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++    S+F+VFS  ++         +P      +R    +  ++ +  G  GLA++ 
Sbjct: 299 DLSDIVKDSDFKVFSGTVANGGFVRAICVPGGADKYSRKDISKKEDYIKRYGAKGLAWVK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GPVAK LN    + I   +  +DGD   F+A             R  I
Sbjct: 359 VTAD-----GYNGPVAKFLND-KADQINAEMGAKDGDLILFVAASFHVVADSLGYLRRAI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+EL +I    + + W++++P +E++E   K   AH+PFTM             D     
Sbjct: 413 AEELDMIKPGQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAH 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD++ NG EI  G IR H  +V  +    +G +KE  E RFG L +A   GMPP GG
Sbjct: 473 AQSYDIILNGQEIGGGSIRIHDPKVQEKVLKALGYTKERAEARFGFLLKALTMGMPPEGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           +A G+DR VMLL  A N+R+V  FP +    + L  +P  VS +QL +L + 
Sbjct: 533 LAFGLDRWVMLLAEADNIRDVIPFPKNSKAVEPLTAAPGKVSQQQLDDLKIE 584


>gi|169629949|ref|YP_001703598.1| aspartyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|238688902|sp|B1MCH3|SYD_MYCA9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169241916|emb|CAM62944.1| Aspartyl-tRNA synthetase (AspS) [Mycobacterium abscessus]
          Length = 597

 Score =  603 bits (1554), Expect = e-170,   Method: Composition-based stats.
 Identities = 236/611 (38%), Positives = 336/611 (54%), Gaps = 28/611 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  S+ G  V L+GWV R R HGG+IF+D+RD  G+ QVV   D+   E A  
Sbjct: 3   RTHDAGSLRESNAGQRVTLAGWVARRRDHGGVIFIDLRDASGVAQVVFREDA-VLEQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R     N  I TGQIE++A ++++L+ +    LP   +    E  
Sbjct: 62  LRAEFCVEVSGVVEVRPEGNANDEIATGQIEVNAAELKVLNESAP--LPFQLDETAGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR+     I  R++   + R  +    F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLRYRYLDLRREGPGNAIRLRSKANAAARSVLSGHEFVEVETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E +L  +++       V     RI Y +A+RRYG+DKPDLR  + +   T+
Sbjct: 239 DQDDVIALAEEILVALWDLVG--YRVPTPIDRITYAEAMRRYGSDKPDLRFGLELVECTD 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   E+A+ +G  GLAY+   + 
Sbjct: 297 YFSETSFRVFQAP------YVGAVVMPGGADQPRRTLDGWQEFAKQRGHKGLAYVL--VG 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L+    + +   +    GD  FF AG      +     R  +AQ L
Sbjct: 349 EDGTLG--GPVAKNLSDAERDGLAAHVGANPGDCIFFSAGAAKSSRALLGSVRGEVAQRL 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
           G+I+ + + F W++D P +E  ++                 H+ FT P+   E+    D 
Sbjct: 407 GLIDPDAWAFTWVVDAPLFEPADDATAAGDVAVGSGAWTAVHHAFTSPKPESENTFDTDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD+VCNG EI  G IR H  ++  + F  +GIS E  + +FG L  AF  G P
Sbjct: 467 GSALAYAYDIVCNGHEIGGGSIRIHRRDIQERVFQVMGISNEDAQEKFGFLLDAFAFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DR+  LL G  ++REV  FP S    D L  +P+ ++  Q +E G+     
Sbjct: 527 PHGGIAFGWDRVTALLAGTSSIREVIAFPKSGGGVDPLTDAPAPITAAQRKESGID--AK 584

Query: 595 PKKILKISVTT 605
           P+K  K     
Sbjct: 585 PEKAEKAGKPA 595


>gi|290581365|ref|YP_003485757.1| aspartyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254998264|dbj|BAH88865.1| aspartyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 589

 Score =  603 bits (1554), Expect = e-170,   Method: Composition-based stats.
 Identities = 223/598 (37%), Positives = 347/598 (58%), Gaps = 17/598 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACF 59
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP    +   
Sbjct: 1   MKRSMYAGAVRSEHIGQELTLKGWVARRRDLGGLIFIDLRDREGIVQLVVNPKTASNTVV 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A+S+RSE+V+ + G+++ R  +  N N+ TG +E+   ++ IL+ ++  P  +  + E
Sbjct: 61  KSAESLRSEYVIEVTGMIVER--DQANDNLPTGCVEMQVTQLTILNASQTPPFEIKDKIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + KN   R ++ + +R  +   +FI+  TP+L  S+PEGARD
Sbjct: 119 VNDDTRLRYRYLDLRRPEMLKNFKLRAKVTHVIRNYLDDLDFIDVETPMLAKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+++G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRMSRGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I    E ++  V +E      +     +I YD A+  YG+DKPD R  + +
Sbjct: 238 ETSFLSEQEIQEITERLIACVMKEVKGIE-LQLPLPQISYDTAMNNYGSDKPDTRFEMTL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T+   + +F+VFS+     P  +           +R   D++ +  +  G  GLA++
Sbjct: 297 QDLTDLVKNIDFKVFSQA----PAVKAIVAKNAANSYSRKAIDKLTDIVKPFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +   + G     GP+AK L  +  + +  RL ++  D  FF+A D           RNH
Sbjct: 353 KYNDGKIG-----GPIAKFLTTIE-DELIERLQLEANDLVFFVADDLEIANGSLGALRNH 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ    +    DL  ++A
Sbjct: 407 LAKELNLIDHSKFNFLWVVDWPMFEWSEEENRYTSAHHPFTLPQEDTVAELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E   + F  +G +KE  + +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQRETQERMFKALGFTKESAQKQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR VMLL G +N+REV  FP +    D +  +PS VS +QL EL L++ +N  K
Sbjct: 527 ALGLDRFVMLLAGKENIREVIAFPKNNKASDPMTQAPSLVSDKQLDELYLQVNKNAVK 584


>gi|255327172|ref|ZP_05368247.1| aspartate--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255295790|gb|EET75132.1| aspartate--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 590

 Score =  603 bits (1554), Expect = e-170,   Method: Composition-based stats.
 Identities = 229/602 (38%), Positives = 325/602 (53%), Gaps = 27/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L  +++G  V L+GWV R R HGG+ F+D+RD  G+TQ V           + 
Sbjct: 3   RTHTNGELTAANIGETVTLTGWVARRRDHGGVAFVDLRDREGVTQCVF----HNEADFEH 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL + GLV  R     N N+ TG+IE+    +E+L+ A  LP  +    E  E  
Sbjct: 59  LRNEYVLRVTGLVTKRPEGNENPNLATGEIEVEVSAVEVLNTAAPLPFQIDEHVEVGEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR    + +  R+    + R  +  + +IE  TP LT S+PEGARDFLVP+
Sbjct: 119 RLRYRYLDLRRPEPARIMRLRSDANRAARNLLAEDGYIEVETPTLTRSTPEGARDFLVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLL   G ++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +Q+DI+   E ++  V+        V     R+ Y DA+ +YGTDKPDLR  + +  +TE
Sbjct: 238 DQEDIIELGERIVEAVWNLI--DVKVPRPIQRMTYKDAMEKYGTDKPDLRFGLELTELTE 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+  +  
Sbjct: 296 YFKDTTFRVFKAP------YVGAVVMPGGASQPRRTLDAWQEWAKQRGAKGLAYVLIQ-- 347

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK++       +      + GD  FF AG+     +    AR  I    
Sbjct: 348 EDGELT--GPVAKNITDAERAGLAEATGAKPGDCIFFAAGEAKASRALLGAARVEIGHRT 405

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGMESLKGNDL 474
           G+I    + F W++D P +E + E                 H+ FT P+         D 
Sbjct: 406 GLIKDGEWSFVWVVDAPMFESSAEATESGDVALGHSAWTAVHHAFTSPKPEFLDTFDTDP 465

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD+VCNG EI  G IR H  +V  + F+ +GI +E  + +FG L  AF+ G P
Sbjct: 466 GSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFAVMGIGEEEAQEKFGFLLDAFKYGAP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           P GGIA G DRIV LL G  ++REV  FP + N  D L  +P+ ++ EQ +E G+     
Sbjct: 526 PMGGIAFGWDRIVSLLAGVDSIREVIAFPKTGNGFDPLTAAPAPITPEQRKEAGVDFKPK 585

Query: 595 PK 596
            K
Sbjct: 586 KK 587


>gi|270296725|ref|ZP_06202924.1| aspartyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270272712|gb|EFA18575.1| aspartyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 585

 Score =  603 bits (1554), Expect = e-170,   Method: Composition-based stats.
 Identities = 223/598 (37%), Positives = 337/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            YR+H+CG+L +SDV   V L+GWV R R  GG+ F+D+RD YGITQ+V N +      E
Sbjct: 1   MYRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  R ++  N +I TG IE+   ++++L+ +   P  +    + 
Sbjct: 61  RANRLGREFVIQVKGTVNERFSK--NQHIPTGDIEIIVSELDVLNSSLTPPFTIEENTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  +  N+  R ++   +R  + ++ FIE  TPIL  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD++N  E + + +F+E          F+R+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQDDVINLFEGMAKYLFKEIRGVEMNE-PFMRMPWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAY 358
            + +      F VF     +                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDIMKGHGFPVFDNAAYIGG-----ICAEGAAHYTRKQLDALTEFVKRPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  GNV     V K       + ++   + + GD    ++GD   K      + R
Sbjct: 352 A--RVEADGNVK--SSVDKFYAQEVLQEMKAAFNAKPGDLILILSGDDAMKTRKQLNELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW++EE ++   H+PFT P+     L   D  ++
Sbjct: 408 LEMGNQLGLRDKNKFVCLWVVDFPMFEWSDEEGRLMAMHHPFTHPKDEDIPLLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+VCNG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAQEQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL L +    
Sbjct: 528 GLAYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQKQLDELNLTVEVKE 585


>gi|291545651|emb|CBL18759.1| aspartyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 599

 Score =  603 bits (1554), Expect = e-170,   Method: Composition-based stats.
 Identities = 227/597 (38%), Positives = 335/597 (56%), Gaps = 11/597 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFE 60
           +RT  C ++    VG  V L GWV + R  GG++F+D+RD  GI Q++      D   F 
Sbjct: 9   HRTCRCAEVTTEMVGKEVTLMGWVAKARNKGGLVFVDLRDRSGIMQLIFENGSIDEEGFT 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ + G V  R    +N N+ TG+IEL  + + +L+ A+  P P+    + 
Sbjct: 69  KAGKLRSEFVIAVTGTVEKR-GGAVNENLATGEIELRVKSLRVLAEADVPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  L +NI+ ++++    R     E F+E  TP+L  S+PEGARD+
Sbjct: 128 KDEIRLKYRYLDLRRPDLQRNIMMKSKVAQLTRQFFTEEGFLEIETPMLGKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFY LPQ+PQ YKQLLM SGFDRY QIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGSFYGLPQSPQLYKQLLMCSGFDRYIQIARCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E  L  +F+E  + + V     RI + +A+ R+G+DKPD+R  + +H
Sbjct: 247 LSFVDVDDVIDVNERYLAFLFKEVLDID-VKLPIQRITWQEAMDRFGSDKPDMRFGMELH 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++      F VF+  L             +G    R   D++ E+ +  G  GLAYI 
Sbjct: 306 DVSDIVKDCGFGVFTGALENGGSVRGINAEGQG-AMPRKKIDKLVEFVKGYGAKGLAYIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D           AK +     +A+   +D + GD   F A             R  +
Sbjct: 365 IAEDG----TRKSSFAKFMTDEEMDALVKAMDGKPGDLLLFAADKTKLVYDVLGALRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++ +++ N + F W+ +FP  EW+EEE +    H+PFTM       L   D   ++A 
Sbjct: 421 AKQMDLLDKNEYRFVWVTEFPLLEWSEEENRFTAMHHPFTMLMEEDLPLLDTDPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H  ++  + F  +G +KE    +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIHQDDIQERMFEALGFTKEAAHEQFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+VML+  A  +R+V  FP  ++   L+  SPS VS  QL ELGL +    ++
Sbjct: 541 YGLDRLVMLMAKADTIRDVIAFPKVKDASCLMTQSPSQVSEAQLHELGLDLEPQKEE 597


>gi|225159378|ref|ZP_03725674.1| aspartyl-tRNA synthetase [Opitutaceae bacterium TAV2]
 gi|224802039|gb|EEG20315.1| aspartyl-tRNA synthetase [Opitutaceae bacterium TAV2]
          Length = 599

 Score =  603 bits (1554), Expect = e-170,   Method: Composition-based stats.
 Identities = 232/603 (38%), Positives = 349/603 (57%), Gaps = 20/603 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           M   RTH C  L  +D+G+ V L GWV  +R HGGI+F+D+RD  GITQV  +P S    
Sbjct: 1   MKLQRTHHCAQLTKADLGASVSLLGWVDSIRDHGGILFIDLRDRKGITQVKFDPQSNPAL 60

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE- 117
              A +++ E V+ +DG V++R   T+NA++ TG+IE+ A  + I ++++  P P+    
Sbjct: 61  AAQAATLKPESVIGVDGKVVARPEGTVNASLPTGEIEVDATALTIHNISDTPPFPLDDAA 120

Query: 118 -REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             +  E +R  YR+LDLRR  + KN+  R R   ++R    A+ FIE  TP L  S+PEG
Sbjct: 121 ADKVNEDLRLTYRYLDLRRPKMRKNLQVRHRATKAIRDYFDAQEFIEVETPALFKSTPEG 180

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR++LVPSR++ G FYAL Q+PQQ+KQ+LM +G +RYFQIA CFRDED R+DR   EF Q
Sbjct: 181 AREYLVPSRIHPGEFYALSQSPQQFKQILMVAGVERYFQIARCFRDEDLRADRQ-MEFTQ 239

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +D+E SF+ ++D+    E +L+ V+++  N +  +    R+ + +A+ R+G DKPDLR  
Sbjct: 240 VDVEASFITREDVYALFEGMLKKVWKDILNVDIPAPI-QRMPFHEAMNRFGVDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPG 355
           + + ++T+ F  S F+VF    +V  G  + AI AKG     +     + + A+S G  G
Sbjct: 299 LELTDLTKTFKTSAFKVFQ--ATVAGGGVIKAINAKGLADLTQGELKNLEDIAKSLGAKG 356

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LA+I     E        P+ K  +     A+  +L + +GD  FF A    K C+    
Sbjct: 357 LAFIKVEGGE-----WKSPIVKFFSDAEKAALTQQLGIAEGDMIFFAAAPWEKACAILGR 411

Query: 416 ARNHIAQEL----GI-INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
            R   AQ L     + I+ N ++F W++DFP   ++EE       H+PFT P      L 
Sbjct: 412 IRLEAAQLLVKRGKLTIDPNDWKFLWVVDFPLMSYDEERGGYAATHHPFTAPVPEDIHLL 471

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV-VENRFGGLYRAF 529
            +D  +++   YDLV NG E+  G IR H   +  + F +V    +  VE+RFG + +AF
Sbjct: 472 DSDPKAVRGQHYDLVLNGMELGGGSIRIHQPALQKKVFEDVLKIPQDVVESRFGYMLKAF 531

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
             G PPHGGIA G+DR+V LL G  ++R+V  FP +Q   DL+  SP+ V+ +QL+EL +
Sbjct: 532 TYGAPPHGGIAFGLDRMVALLCGTTSIRDVIAFPKTQKGQDLMAQSPTPVTAKQLKELHI 591

Query: 590 RIV 592
           + V
Sbjct: 592 QTV 594


>gi|260578813|ref|ZP_05846720.1| aspartate--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603111|gb|EEW16381.1| aspartate--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 600

 Score =  603 bits (1554), Expect = e-170,   Method: Composition-based stats.
 Identities = 239/606 (39%), Positives = 336/606 (55%), Gaps = 29/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L   ++G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +S   E A  
Sbjct: 3   RTHLAGELRPDNIGDEVTLTGWVGRRRDHGGVIFIDLRDRSGVAQVVF-RESEVAERAHD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYP 121
           +RSE+ L + G+V +R   + N N+ +G IE++   +E+L+ A  LP  +       E  
Sbjct: 62  LRSEYCLKVTGVVEARPEGSENPNLASGGIEVNVSALEVLNEAAALPFQIDDPSSSGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR T    +  R+R+  + R  +   +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRKTQGDALRLRSRVNQAARGVLAEHDFTEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLRPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D+++  E +L  +++E      +S    R+ Y DA++ YG+DKPDLR  I +  
Sbjct: 241 SFVDQEDVISLAEEILVAIWKEIG--YEISTPIPRMTYADAMKYYGSDKPDLRFDIQITE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            T+ F ++ FRVF         Y    +   G    R   D   EWA+ +G  GLAYI  
Sbjct: 299 CTDFFKNTTFRVFQN------EYVGAVVMEGGADQPRRQLDAWQEWAKQRGAKGLAYIL- 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G ++  GPVAK++       I   +  + GD  FF AG+     +    AR  IA
Sbjct: 352 -VGEDGELS--GPVAKNITDEERAGIAEHVGAKPGDCIFFAAGETKPSRALLGAARGEIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGMESLKG 471
            +LG+I    + F W++D P +E   +                 H+ FT P+        
Sbjct: 409 NKLGLIKEGDWAFTWVVDAPLFEPAADATASGDVALGHSAWTAVHHAFTSPKPEYLDNFD 468

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            +     A+ YD+VCNG EI  G IR H  +V  + F  +GI++E    +FG L  AF  
Sbjct: 469 ENPGEALAYAYDIVCNGNEIGGGSIRIHQPDVQERVFKVMGITEEEAREKFGFLLDAFAF 528

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P  +S  Q +E G+  
Sbjct: 529 GAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPGEISAAQRKESGIDF 588

Query: 592 VENPKK 597
              PKK
Sbjct: 589 --KPKK 592


>gi|317124706|ref|YP_004098818.1| aspartyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315588794|gb|ADU48091.1| aspartyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 595

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 229/602 (38%), Positives = 327/602 (54%), Gaps = 26/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+ FLD+RD  GI QVVA  +      A  
Sbjct: 3   RTHEAGTLRADHAGQTVTLTGWVARRRDHGGVAFLDLRDASGIAQVVARDEVLAQGGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E+ + + G V  R     N ++ TG+IE+   ++E+L+ +  LP  +       E  
Sbjct: 63  VRNEFCVRVTGDVRVRPEGNTNPDLPTGEIEVIVSELEVLNPSAPLPFQIDERVTVGEEA 122

Query: 125 RFKYRFLDLRRD---TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           R K+R+LDLRR    +    I  R+++  + R  +   +F+E  TP LT S+PEGARDFL
Sbjct: 123 RLKHRYLDLRRPGASSAGSAIRLRSKVNAAARKVLGERDFVEIETPTLTRSTPEGARDFL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 183 VPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ D+L   E V+R +++       +   FL++ Y  A+ RYG+DKPDLR    + +
Sbjct: 242 SFVEQSDVLELGEAVVREIWKLIG--VDLEPPFLQMTYAQAMARYGSDKPDLRFGQELVD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE+F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAY+  
Sbjct: 300 CTEYFTDTPFRVFQS------EYVGAVVMPGGASQPRKQLDAWQDWAKQRGAKGLAYVLV 353

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D  G +   GPVAK+L       +   +  + GD+ FF AG      +    AR  I 
Sbjct: 354 QAD--GTLG--GPVAKNLTDAERAGLAAHVGAKPGDAVFFAAGPAKPSRALLGAARLEIG 409

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGMESLKG 471
           +   +I+ + + F W++D P +E   +                 H+ FT P+   E    
Sbjct: 410 RRCDLIDESQWSFLWVLDAPLFEPAADATASGDVALGHSGWTAVHHAFTSPKKEFEDTFD 469

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +D  S  A+ YD+VCNG EI  G IR H  +V  + F  +GI  E  + +FG L  AFQ 
Sbjct: 470 SDPGSALAYAYDMVCNGNEIGGGSIRIHRRDVQERVFGVMGIGAEEAQEKFGFLLDAFQY 529

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DRIV LL   +++R+V  FP +    D L  +P+ ++ +Q +E G+  
Sbjct: 530 GAPPHGGIAFGWDRIVSLLARTESIRDVIAFPKTGGGYDPLTAAPAPITPQQRKEAGVDA 589

Query: 592 VE 593
             
Sbjct: 590 TP 591


>gi|58581279|ref|YP_200295.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58425873|gb|AAW74910.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 614

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 224/596 (37%), Positives = 335/596 (56%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 28  RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 87

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + TG++E+ A +I IL+ A    LP     
Sbjct: 88  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRTGKVEVIATRISILNKAAP--LPFHAHE 143

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 144 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 203

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 204 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 262

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RRYG+DKPDLR  + 
Sbjct: 263 MEFAFVRERDVQDFVEDMMRAIFKEVVDVD-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 321

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V E    SEF VF+   +   G         G   +R   D     A   G  GLAY
Sbjct: 322 LVDVAELVKSSEFPVFTAAANDADGRVAALRIPGGATLSRKQIDDYAAHAAKYGAKGLAY 381

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +L E+G V+   P+AK  +     A+   +   +GD  FF AG   K   F    R 
Sbjct: 382 I--KLSETGEVS--SPIAKFFSEEAFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALRL 437

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +E  ++    +   W+ DFP +EW+EE ++    H+PFT P     +    +  +  
Sbjct: 438 KAGKEFDLV-AEGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTAV 496

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGG
Sbjct: 497 SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGG 556

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   
Sbjct: 557 IAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQVRSK 612


>gi|168179548|ref|ZP_02614212.1| aspartyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182669835|gb|EDT81811.1| aspartyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 593

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 232/594 (39%), Positives = 343/594 (57%), Gaps = 12/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG+   +++G  V + GWV R R  GG+IF+D+RD  GI Q+V     +   FE 
Sbjct: 9   KRTIMCGEPRENNIGQKVIVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           + +V+SE+ + + G ++ R   + N ++ TG +EL  + I+ILS +E  P+ +    +  
Sbjct: 69  SDNVKSEYCIAVTGEIVKRQ--SPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDAS 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  + K  + R +    +R  +    F+E  TPILT S+PEGARD+L
Sbjct: 127 ENVRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR  +G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQIDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE+DD++   E +L  VF+E    + V     R+ Y  A+ +YG+DKPDLR  + +++
Sbjct: 246 SFVEEDDVIELNERLLAKVFKEIGGID-VKLPIERMPYKIAMEKYGSDKPDLRFGMEIND 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE   +SEF+VF   +                   R   D++ ++ ++    GLA+I +
Sbjct: 305 LTEAVKNSEFKVFKGSIEAGGSVRAIK-AENCATMGRKQIDKLQDFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE        P+AK L     +AI  ++D + GD    +A             R HIA
Sbjct: 364 KEDE-----IKSPIAKFLTEEEMKAILEKMDAKAGDLILIVADKNNVVFESLGALRLHIA 418

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL IIN N F F WI +FP   +NEEE +    H+PFT        L   +   ++A  
Sbjct: 419 KELDIINKNEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIELLDTEPGKVRAKA 478

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H S++  + FS +G +KE    RFG L  AF+ G PPHGG+A 
Sbjct: 479 YDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGLAY 538

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR++M L G +N+++V  FP +QN    L  +P+ V   QL ELG++ +E  
Sbjct: 539 GLDRMIMFLAGTENIKDVITFPKNQNAFCPLTEAPNVVDENQLEELGIKKIEKE 592


>gi|332299449|ref|YP_004441370.1| aspartyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332176512|gb|AEE12202.1| aspartyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 580

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 234/593 (39%), Positives = 338/593 (56%), Gaps = 17/593 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YRTH+CG L  SD G  V L+GWV ++R  G + FLD+RD YGITQ+  +       + 
Sbjct: 1   MYRTHTCGALRASDEGQQVTLAGWVAKIRRMGAMTFLDLRDRYGITQIFFDESHQG--LL 58

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             V  EWVL + G V  RS  ++N  I TGQIE+ A ++E+L+ A+  P  +    +  +
Sbjct: 59  SEVGREWVLAVTGTVRLRS--SVNEKIPTGQIEILADRMEVLNRADTPPFTIEDVSDGGD 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +  NI  R R+    R  +   +F+E  TP+L  S+PEGARDF+V
Sbjct: 117 DLRMKYRYLDLRRRPVLSNIELRHRMTMETRRYLDGLHFLEIETPMLIGSTPEGARDFVV 176

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM +G DRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 177 PSRMNPGQFYALPQSPQTFKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 235

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDDIL+T E + + +F+E    + +     R+ + +A+ RYG+DKPDLR  + +  V
Sbjct: 236 FVEQDDILSTFEGLAKHLFKEIRGID-LPTPLRRMTWYEAMDRYGSDKPDLRFGMEIEEV 294

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAYIF 360
           TE      F V      +        +        R   D++ ++ +    G  GL ++ 
Sbjct: 295 TETIQGHGFGVVDSAAYIG-----AIVVTGKADYTRKQIDQLTDFVKRPQVGAKGLLWLR 349

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           ++ D            K L     +A+  +L MQ GD  F I+GD           R HI
Sbjct: 350 YQPDG----TMKSSFDKFLTADQLKALADKLSMQPGDIAFLISGDKRPAQKQLGTLRLHI 405

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ELG++    +E  W++DFP  EW+EE ++    H+PFT P+   +    +D  S++A 
Sbjct: 406 ASELGLMKPGQYECLWVVDFPLLEWDEETQRYYAMHHPFTAPKPEDQDRLESDPGSVRAD 465

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +E+  + F+ +G +KE  E +FG L  AF+ G PPHGGIA
Sbjct: 466 AYDMVINGVEVGGGSIRIHDAELQARVFATLGFTKERAEEQFGFLMNAFKYGAPPHGGIA 525

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR V L+    ++R+   FP + +  D+++ +P+ +  EQL EL L + E
Sbjct: 526 FGLDRWVSLMAELDSIRDCIAFPKNNSGRDVMIDAPARLDPEQLDELHLTVRE 578


>gi|76788619|ref|YP_330636.1| aspartyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|97196930|sp|Q3JYL7|SYD_STRA1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|76563676|gb|ABA46260.1| aspartyl-tRNA synthetase [Streptococcus agalactiae A909]
          Length = 583

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 229/592 (38%), Positives = 343/592 (57%), Gaps = 17/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACF 59
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  GI Q+V NP+    +  
Sbjct: 1   MKRSMYAGRVRSEHIGTSITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSASVM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G+V +R  E  N N+ TG++EL  Q++ +L+ ++  P  +    E
Sbjct: 61  ATAESLRSEFVIEVSGVVTAR--EQANDNLPTGEVELKVQELSVLNTSKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 ANDDTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I + +E ++  V ++      VS  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDIVEGMIAKVMKDTKGLE-VSLPFPRMAYDDAMNNYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+        +   +  K    +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTEVVKEVDFKVFSEA----SVVKAIVVKNKADKYSRKNIDKLTEIAKQYGAKGLAWL 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  +        GPVAK L  +  + +   L +++ D   F+A             R  
Sbjct: 353 KYADN-----TISGPVAKFLTAIE-DRLTEALQLENNDLILFVADSLEVANETLGALRTR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +I+ + F F WI+D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IAKELELIDYSKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTAETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  +   + F  +G S E  + +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDTQERMFKALGFSAESAQEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L +
Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEQQLEELSLTV 578


>gi|320174355|gb|EFW49504.1| aspartyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 573

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 213/576 (36%), Positives = 320/576 (55%), Gaps = 7/576 (1%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGLVMSR 80
            L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G V +R
Sbjct: 2   TLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRAR 61

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             + IN ++ TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR  + +
Sbjct: 62  DEKNINRDMGTGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRPEMAQ 119

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
            +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ 
Sbjct: 120 RLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQL 179

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R +
Sbjct: 180 FKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHL 238

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
           + E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + 
Sbjct: 239 WLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAND 296

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
             G         G    R   D    + +  G  GLAYI       G      PVAK LN
Sbjct: 297 PKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLN 356

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
               EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W++DF
Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDF 416

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H 
Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKVAPENAVANAYDMVINGYEVGGGSVRIHN 475

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V 
Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 571


>gi|118462335|ref|YP_882629.1| aspartyl-tRNA synthetase [Mycobacterium avium 104]
 gi|166225363|sp|A0QI91|SYD_MYCA1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|118163622|gb|ABK64519.1| aspartyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 591

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 233/603 (38%), Positives = 329/603 (54%), Gaps = 26/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+ G L  SD G  V L+GWV R R HGG+IF+D+RD  GITQVV   D    + A  
Sbjct: 3   RSHAAGSLRSSDAGQQVTLAGWVARRRDHGGVIFIDLRDASGITQVVF-RDPDVLKQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + GLV  R     N  I TG IE++A  + +L  +    LP   +    E +
Sbjct: 62  LRAEFCVAVAGLVEIRPEGNANPEIATGDIEVNASSLTVLGESAP--LPFQLDEPAGEEL 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRRD     I  R+++  + R  +   +F+E  TP +T S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRRDAPAAAIRLRSKVNAAAREVLDRHDFVEIETPTITRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 180 RLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +D++   E +L  ++        +     RI Y DA+ RYG+DKPDLR  + +   +E
Sbjct: 239 DAEDVIAISEEILAALWALIG--YEIPRPIPRISYADAMARYGSDKPDLRFGLELVECSE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 297 FFKDTTFRVFQAP------YVGAVVMPGGASQPRRTLDGWQEWAKQRGAKGLAYVL--VG 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L+      +   +    GD  FF AG      +    AR+ IA  L
Sbjct: 349 EDGELG--GPVAKNLSEAERAGLAGHVGAAPGDCIFFAAGPAKPSRALLGAARSEIAHRL 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
           G+I+   + F W++D P +E  ++                 H+ FT P+ G E     D 
Sbjct: 407 GLIDPQAWAFVWVVDPPLFEPADDATAAGDVAVGSGAWTAVHHAFTAPKPGYEDAIETDT 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            ++ A  YD+VCNG EI  G IR H  ++  + F+ +G+       +FG L  AF  G P
Sbjct: 467 GNVLADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDNAEAREKFGFLLEAFTFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRI  LL    ++REV  FP +    D L  +P+ ++ +Q +E G+ +   
Sbjct: 527 PHGGIAFGWDRINALLSRVDSIREVIAFPKTGGGVDPLTDAPAPITEQQRKESGIDVKPE 586

Query: 595 PKK 597
           P K
Sbjct: 587 PSK 589


>gi|325105721|ref|YP_004275375.1| aspartyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324974569|gb|ADY53553.1| aspartyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 582

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 225/595 (37%), Positives = 334/595 (56%), Gaps = 17/595 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           MH  RTH+CG+L ++D+G  V LSGWV + R  GG+ F+D+RD YGITQ+V N D     
Sbjct: 1   MH--RTHTCGELTIADLGKEVILSGWVQKSRDLGGMTFIDVRDRYGITQLVFNADDDAEL 58

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
              A+ +  E+V+ + G V+ R+ +  N  + TG IE+   ++E+L+ A+  P  +  E 
Sbjct: 59  RATARDLGREFVIKVIGTVIERTNK--NPKMPTGDIEIKVSRLEVLNAAKLPPFLIEDET 116

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  + +R KYR+LDLRR+ +  N+V R ++   +R  + +++FIE  TP L  S+PEGAR
Sbjct: 117 DGGDDLRMKYRYLDLRRNPVRSNLVLRHKMAQEIRKYLDSQDFIEVETPYLIKSTPEGAR 176

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DF+VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D
Sbjct: 177 DFVVPSRMNPGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQID 235

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            EMSF+EQ+DILN  E + R +F+     +     F R+ YD+A+R YG+DKPD R  + 
Sbjct: 236 CEMSFIEQEDILNLFEGLTRHMFKTVKGLDIAE--FPRMSYDEAMRLYGSDKPDTRFGME 293

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
             ++TE      F VF           +           R   D + ++ +         
Sbjct: 294 FVDITEIGKGKGFPVFDNA-----DIAIGINAKASASYTRKQLDELTDFIKRPQIGATGM 348

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADAR 417
           I+ R ++ G++     V K  N    +        + GD    +AG +  K      + R
Sbjct: 349 IYMRHNDDGSLK--SSVDKFFNEDELKKWSEAFQTEPGDLVLVLAGQNKDKVRKQLNELR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +   LG+ + N F   W++DFP  EW+EE  +    H+PFT P+    +    D  ++
Sbjct: 407 LEMGNRLGLRDRNKFAPLWVVDFPLLEWDEETARYHAMHHPFTSPKPEDIAKLDTDPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG EI  G IR H  E+    F ++G + E  + +FG L  AF+ G PPHG
Sbjct: 467 RANAYDLVINGTEIGGGSIRIHNRELQSLMFKHLGFTPEEAQKQFGFLMDAFEYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIA G DR+V +  G   +R+V  FP + +  D+++ +PST+  +Q  EL ++  
Sbjct: 527 GIAFGFDRLVSIFAGLDTIRDVIAFPKNNSGRDVMIDAPSTIDEKQKEELSIKTT 581


>gi|317477028|ref|ZP_07936270.1| aspartyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316906821|gb|EFV28533.1| aspartyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 585

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 225/598 (37%), Positives = 336/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            YR+H+CG+L +SD+   V LSGWV R R  GG+ F+D+RD YGITQ+V N +      E
Sbjct: 1   MYRSHTCGELRISDINKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVDAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ I G V  R ++  N NI TG IE+   ++ +L+ A   P  +    + 
Sbjct: 61  QANHLGREFVIQIVGTVNERFSK--NKNIPTGDIEIIVSELNVLNSALTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR T+ KN+  R ++   +R  + ++ FIE  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRATVRKNLELRHKMTIEVRKYLDSKGFIEVETPLLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++   E + + +F+E      ++  F R+ + +A++ YG+DKPDLR  +   
Sbjct: 238 MSFVQQDDVIELFEGMAKYLFKEIRGVE-LTEPFQRMPWANAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     +                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDIMKGHGFSVFDNAAYIGG-----ICAEGAASYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  G V     V K       + ++     + GD    ++GD   K      + R
Sbjct: 352 A--RVEADGTVK--SSVDKFYTQEVLQEMKAAFGAKPGDLILILSGDDAMKTRKQLNELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   WI+DFP +EW+EEE ++   H+PFT P+     L   +  ++
Sbjct: 408 LEMGNQLGLRDKNKFALLWIVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTNPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+VCNG E+  G IR H +++  + F  +G + E  E +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAEEQFGFLMNAFKFGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL L +    
Sbjct: 528 GLAYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQKQLDELNLIVEVKE 585


>gi|68536118|ref|YP_250823.1| aspartyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|97196643|sp|Q4JVF2|SYD_CORJK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|68263717|emb|CAI37205.1| aspS [Corynebacterium jeikeium K411]
          Length = 600

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 239/606 (39%), Positives = 336/606 (55%), Gaps = 29/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L   ++G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +S   E A  
Sbjct: 3   RTHLAGELRPDNIGDEVTLTGWVGRRRDHGGVIFIDLRDRSGVAQVVF-RESEVAERAHD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYP 121
           +RSE+ L + G+V +R   + N N+ +G IE++   +E+L+ A  LP  +       E  
Sbjct: 62  LRSEYCLKVTGVVEARPEGSENPNLASGGIEVNVSALEVLNEAAALPFQIDDPSTSGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR T    +  R+R+  + R  +   +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRKTQGDALRLRSRVNQAARGVLAEHDFTEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLRPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D+++  E +L  +++E      +S    R+ Y DA++ YG+DKPDLR  I +  
Sbjct: 241 SFVDQEDVISLAEEILVAIWKEIG--YEISTPIPRMTYADAMKYYGSDKPDLRFDIQITE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            T+ F ++ FRVF         Y    +   G    R   D   EWA+ +G  GLAYI  
Sbjct: 299 CTDFFKNTTFRVFQN------EYVGAVVMEGGADQPRRQLDAWQEWAKQRGAKGLAYIL- 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G ++  GPVAK++       I   +  + GD  FF AG+     +    AR  IA
Sbjct: 352 -VGEDGELS--GPVAKNITDEERAGIAEHVGAKPGDCIFFAAGETKPSRALLGAARGEIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGMESLKG 471
            +LG+I    + F W++D P +E   +                 H+ FT P+        
Sbjct: 409 NKLGLIKEGDWAFTWVVDAPLFEPAADATASGDVALGHSAWTAVHHAFTSPKPEYLDNFD 468

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            +     A+ YD+VCNG EI  G IR H  +V  + F  +GI++E    +FG L  AF  
Sbjct: 469 ENPGEALAYAYDIVCNGNEIGGGSIRIHQPDVQERVFKVMGITEEEAREKFGFLLDAFAF 528

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P  +S  Q +E G+  
Sbjct: 529 GAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPGEISAAQRKESGIDF 588

Query: 592 VENPKK 597
              PKK
Sbjct: 589 --KPKK 592


>gi|295136381|ref|YP_003587057.1| aspartyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294984396|gb|ADF54861.1| aspartyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 583

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 224/594 (37%), Positives = 339/594 (57%), Gaps = 19/594 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YR+H+CG+L  S +G+ V LSGWV ++R  G ++++D+RD YGITQ++ + + +  ++ 
Sbjct: 1   MYRSHTCGELNSSKIGNEVTLSGWVQKIRNKGFMVWVDLRDRYGITQLIFDEERSSEDLM 60

Query: 63  KS---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           K    +  E+V+ + G V+ R  E+ N NI TG+IE+  +++ IL+ +   P  +  E +
Sbjct: 61  KKAATLGREFVIQVKGDVIER--ESKNPNIATGEIEVLVKELAILNASLTPPFTIEEETD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR+ +   ++ R ++   +R  +  + FIE  TP L  S+PEGARD
Sbjct: 119 GGEDLRMKYRYLDIRRNPVKNKLIFRHKVGMQVRNYLSNQGFIEVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DILN  E + R + +E +N    +  F R+ YD+A+R+YG DKPD+R  +  
Sbjct: 238 EMAFVEQEDILNIFEGLTRHLLKEINNITIDA--FPRMTYDEAMRKYGNDKPDIRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             + +   +  F VF +           A+P       R   D +  W +    G  GL 
Sbjct: 296 AELDDIAKNKGFNVFDQ----QELVVGIAVP-GAASYTRKQIDALISWVKRPQIGANGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +  +  D     +    V K     N +        + GD    +AGD  K  S  +  R
Sbjct: 351 WAKYNDDG----SLKSSVDKFYTEENLKEWAQATGAKPGDLILVMAGDANKTRSQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            H+  ELG+   + F   W++DFP  EW+EE ++    H+PFT P+     L   D   +
Sbjct: 407 MHLGNELGLRKPDEFAPLWVIDFPLLEWDEETERYHAMHHPFTSPKAEDIPLLATDPGKV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG EI  G IR H  E   + FS++G ++E  + +FG L  AFQ G PPHG
Sbjct: 467 RANAYDLVLNGNEIGGGSIRIHDKETQSKMFSHLGFTEEEAKEQFGFLMNAFQYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G DR+  +L G + +R+   FP +    D+++ +PS +   QL+EL L++
Sbjct: 527 GIAFGFDRLTAILGGQETIRDFIAFPKNNAGRDVMIDAPSKLDESQLKELSLKL 580


>gi|159897936|ref|YP_001544183.1| aspartyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|238687086|sp|A9B392|SYD_HERA2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|159890975|gb|ABX04055.1| aspartyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 594

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 247/592 (41%), Positives = 350/592 (59%), Gaps = 9/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-- 62
           RTH+CG+L    +   V L+GWVHR R HG ++FLD+RD YG+TQV+ +P S     A  
Sbjct: 3   RTHTCGELRRDHIDQTVTLAGWVHRRRDHGTVLFLDLRDRYGLTQVIVDPSSNPEARAML 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+++E+V+ + G V SR     NAN+ TG IEL  Q  +IL+ A+  P+ V  +    E
Sbjct: 63  DSIKNEYVIQVTGRVRSRLEGAENANLATGAIELEVQSAKILNTAKTPPILVNRDGGEDE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+++LRR+     +  R R I  MR  M  E F E  TPIL  S+PEGARD+LV
Sbjct: 123 ALRLKYRYIELRRERQQHILGLRHRTIKFMRDWMDREGFWEIETPILMKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQ+PQQ KQLLM SG D+YFQIA C RDED R+DR P EF QLD+EMS
Sbjct: 183 PSRLHPGEFYALPQSPQQLKQLLMVSGIDKYFQIARCMRDEDLRADRQP-EFTQLDIEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDD+L+ +E ++  +    +    + + F R+ Y DAI  YG+DKPDLR  +   NV
Sbjct: 242 FVEQDDVLDVVERLMTELVANVTPHKRLVSPFPRLTYADAIEYYGSDKPDLRYDLKFVNV 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            E    S+F VF+  LS     +   +P  G   +R   D + E A+  G  G+A++   
Sbjct: 302 GEIVKDSQFGVFTGALSSGGKVQAIRLPGCG-SYSRKQIDDLQEVAKIGGAKGMAWMAIE 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D     +   P+AK       + ++     + GD   ++A  P    +     R  +A+
Sbjct: 361 ADG----SVRSPIAKFFEQAQLDQLKSATAAEAGDLIVYVADKPAVVAASLDKVRREMAK 416

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQ 481
            L + + +   F W++DFP +E+N E  + D AH+PF M      E ++  +   ++A  
Sbjct: 417 RLDLADKDLMHFAWVIDFPMFEYNAESGEWDAAHHPFCMVNPADVEKMQRGEFEGVRAAS 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLVCNG+E+ASG IR H   +    F  +  S E ++ RFG +  AF+ G PPHGG+A 
Sbjct: 477 YDLVCNGYELASGSIRIHDRSIQQYIFDRLPYSPEEIQKRFGHMLEAFEYGAPPHGGMAP 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDR+VMLL    N+R+V  FP +Q   DL+M +PS+V  +QLRELGLR+ +
Sbjct: 537 GIDRLVMLLADTDNIRDVIAFPKTQRAEDLMMNAPSSVDAKQLRELGLRLAD 588


>gi|289432555|ref|YP_003462428.1| aspartyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946275|gb|ADC73972.1| aspartyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 598

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 244/600 (40%), Positives = 359/600 (59%), Gaps = 12/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           +THSC  L   +VG+ V L+GWVHR R HGG+IF+D+RD  GI QVV NP+ +  C +I 
Sbjct: 3   KTHSCA-LTQENVGTEVTLAGWVHRRRDHGGVIFIDLRDREGIVQVVFNPEQSAACLDIG 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +RSE+VL + G+V  R A T N  + +G +E+ A   +IL+ A+  P  +  E E  E
Sbjct: 62  KELRSEYVLQVKGVVSHRPAGTENNRMPSGMVEVVAVHAKILNAAKTPPFYINEEVEVDE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LD+RR  +  N++ R + +  MR  +  + FIE  TPIL  S+PEGARD+LV
Sbjct: 122 SLRLKYRYLDIRRQGMKNNLIIRHKAVRFMREFLNDQGFIEIETPILIKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQQ KQLLM +G ++Y+Q+A CFRDED R+DR P EF QLDMEMS
Sbjct: 182 PSRLFPGKFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQP-EFTQLDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++D++  ME++  G+          +  F RI + DA+ +YG DKPDLR  + + ++
Sbjct: 241 FVDEEDMMKLMEDLFTGLVASVRPDMKYNKKFPRISFADAMEKYGCDKPDLRFGMELADI 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+    S F VF  + +     +  + P  GG  N++  + +   A+  G  GL  I   
Sbjct: 301 TDIGASSAFGVFKNVAAQGGAIKAISAPGCGG-YNKSQHEELINLAKKYGAAGLVPISLG 359

Query: 363 LDESGNVAGM------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           + E+G +  +         AK+L +   + I  R   + GD    +AG      +   + 
Sbjct: 360 V-ENGELKDLTMEMVKSVAAKYLALEEIKTIAERSGAKPGDLILIVAGARKMVNTVLGEM 418

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           RN +A +L + + N   F +++DFP ++W+EE K+ D  H+PFT P      L   D   
Sbjct: 419 RNQLAVKLNLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLESDMPLMDTDPGR 478

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + +  YD+VCNG+EIA G IR H +++  + F  +G + E ++ RFG L  AF+ G PPH
Sbjct: 479 VGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFHLLGYNDEQIDERFGHLLEAFEFGAPPH 538

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A GIDR VMLL G  ++REV  FP +Q   DLL G+PS V  +Q+R+L +RI    +
Sbjct: 539 GGVAPGIDRFVMLLAGETSIREVISFPKNQAAQDLLFGAPSVVDDKQIRDLHIRIQAEKE 598


>gi|225620713|ref|YP_002721971.1| aspartyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|254781719|sp|C0R2C9|SYD_BRAHW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225215533|gb|ACN84267.1| aspartyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 586

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 236/593 (39%), Positives = 345/593 (58%), Gaps = 10/593 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           R+++   G L   D+G  V+L+GWV R R HGG+IF+D+RD  G  Q+V NP+       
Sbjct: 2   RFKSAYNGILTKDDIGKEVKLAGWVLRRRDHGGVIFVDLRDRTGFVQIVFNPEISKEAHN 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ ++G + +RS E IN  I TG+IE+  +K+E+L+ +E  P  +  + + 
Sbjct: 62  DAQDLRSEYVISVEGKIRARSPEMINPKIPTGEIEVMVEKMELLNTSETPPFLLEDDIDT 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LDLRR T+  N+ KR +I N+ R  +    FI+  TPIL  S+PEGARDF
Sbjct: 122 GEDIRLKYRYLDLRRPTVFNNLYKRFQITNAFRKHLSDNGFIDVETPILNKSTPEGARDF 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQ+PQ +KQ+LM  GFDRY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 182 LVPSRLNAGDFYALPQSPQIFKQILMIGGFDRYYQIAKCFRDEDLRADRQP-EFTQVDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  D+ L+ MENV   + ++    + +   F R+ Y DA+  YG+DKPD R  + + 
Sbjct: 241 TSFLNTDEFLSIMENVTANIVKDVYGID-LPTPFPRLNYYDAMEMYGSDKPDTRFELKLI 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV +     +F VF   L              G   +R   D   ++    G  GLA++ 
Sbjct: 300 NVEDAVRGCDFAVFKNALDNKFIIRCLNAK-GGEKLSRKDIDDFTKYVGIFGAKGLAWM- 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ + G  +    + K  +  N + I      + GD  FF+A  P        + R  +
Sbjct: 358 -RVTDKGLESN---IVKFFSEENQKKILEVTKAEKGDLLFFVADTPKVTFDALGNLRLRV 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +I+ +   F W+++FP +E++ +EK+I   H+PFT P     ++  ++ L +++ 
Sbjct: 414 AEKLNLIDKDKLNFLWVVEFPLFEYDHKEKRISATHHPFTAPVPEDVAILESEPLKVRSD 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG EI  GG R + S+V    F  +GI +E  + RFG L  A + G PP  G+A
Sbjct: 474 TYDLVLNGNEIGGGGQRIYDSKVQAIIFKLLGIDEEKAKLRFGFLLDALKYGAPPMCGMA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            GIDR+VMLL    ++REV  FP +Q    L+ G PSTV  +QL EL L I E
Sbjct: 534 YGIDRVVMLLQKQDSIREVIAFPKTQKGQCLMSGCPSTVDADQLEELHLSIEE 586


>gi|119357451|ref|YP_912095.1| aspartyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|166979740|sp|A1BGZ4|SYD_CHLPD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119354800|gb|ABL65671.1| aspartyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 606

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 287/601 (47%), Positives = 389/601 (64%), Gaps = 8/601 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFE 60
           +R+RT  CG L        V+L GWVHR R HGG+IF+D+RDH GI Q+V  P+    F 
Sbjct: 13  NRFRTDYCGLLNPEVEHQSVKLGGWVHRKRDHGGLIFIDLRDHTGICQIVIQPEEQQLFA 72

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +  E V+CI+G V+ RS   +N  I +G+IE+ A  I + S A  LP PV  E + 
Sbjct: 73  KAEQLHLESVICIEGTVVRRSPGAVNPRIPSGEIEVVAAGISVESSAHPLPFPVADEVQT 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRF+DLRRD +H+NI+ R+R+  ++R  +  ++FIE  TPILT+SSPEGARDF
Sbjct: 133 SEELRLKYRFIDLRRDKIHENIIFRSRLTAAIRRYLEEKSFIEIQTPILTSSSPEGARDF 192

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQLDME 252

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQDD+   +E +   +    S        F RI + D + RYGTDKPDLR P+ + 
Sbjct: 253 MAFIEQDDLFEILEGMFSHLTGSMSTKRIREFPFPRISFRDVMNRYGTDKPDLRIPLEIS 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT  F+ S F+VF+         +   +  +G   +R F D+  + A+  G  GLAYI 
Sbjct: 313 DVTHLFLQSSFKVFAANTKEGCCVKAMLVKGRGNE-SRLFYDKAEKRAKELGSGGLAYIQ 371

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +R D        GP+ K L+     A+R  L ++ GD  FF AG   + C      R + 
Sbjct: 372 FRED-----GPKGPLVKFLSGEELAALRELLGVEVGDVVFFGAGKWEQTCRIMGGMRTYF 426

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +L  ++ +   FCW++DFP YE+NE++KKIDF+HNPF+MPQG M++L+    L+I A+
Sbjct: 427 -SDLFTLDRDELAFCWVVDFPMYEYNEDQKKIDFSHNPFSMPQGEMDALESMPPLNILAY 485

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  ++M +AF   G +KE V++RFG +  AF+ G PPHGGIA
Sbjct: 486 QYDIVCNGIELSSGAIRNHRPDIMYKAFEIAGYTKEDVDSRFGHMIEAFKLGAPPHGGIA 545

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DR+VM+L   +N+REV  FPM+Q   DL+MGSPS V+  QLREL L++    K   K
Sbjct: 546 PGLDRLVMILRDEQNIREVIAFPMNQQAQDLMMGSPSEVTPIQLRELHLQVELPKKAEAK 605

Query: 601 I 601
            
Sbjct: 606 P 606


>gi|168187503|ref|ZP_02622138.1| aspartyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169294589|gb|EDS76722.1| aspartyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 593

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 221/595 (37%), Positives = 335/595 (56%), Gaps = 13/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG+L  S +G    + GWV R R  GG++F+D+RD  GI QVV     D   FE 
Sbjct: 9   KRTVMCGELRESHIGQKHVVMGWVQRKRNLGGLVFVDLRDREGILQVVFGEEIDKEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  V+ E+ + ++G ++ R   + N ++ TG +EL  Q I+ILS +E  P+ +  + +  
Sbjct: 69  ADLVKPEYCIAVEGELVKRQ--SPNESMPTGMVELKGQNIKILSESETPPIYIKEDLDTD 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  + +    R +    +R  +    F+E  TP+LT S+PEGARD+L
Sbjct: 127 EAVRLKYRYLDLRRPDMQRIFKIRHKTAKVLRDFLDENGFLEMETPMLTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYPGMFYALPQSPQLFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQVDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ +D++   E +++ VF+E +N + V     RI Y +A+ +YG+DKPDLR  + +++
Sbjct: 246 SFVDMEDVIALNERLIQKVFKEIANVD-VQLPIQRITYKEAMDKYGSDKPDLRFGMEIND 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F+VF   +           P       R   D++ E+ ++    GLA+I +
Sbjct: 305 ITDAVKDVDFKVFKDAIENGGSVRAIKAP-NCATMGRKQIDKLGEFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE        P+AK L       +   LD + GD    +A             R  +A
Sbjct: 364 KEDE-----IKSPIAKFLGEEGINKVIESLDAKIGDLVLIVADKDSVVLQSLGALRLEMA 418

Query: 422 QELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           + L I+  N  F F W+ +FP   +NEEE +    H+PFTM          +D   ++A 
Sbjct: 419 KRLEILKDNKEFRFAWVTEFPLLSYNEEEDRYQAEHHPFTMSMDEDIQYLESDPGRVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F+ +G + E    RFG L  AF+ G PPHGG+A
Sbjct: 479 AYDIVLNGEELGGGSIRIHDTKLQEKMFNVLGFTSESAWERFGFLLEAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G DR++M L G +N+++V  FP +QN    L  +P+ V  +QL ELG+ + +  
Sbjct: 539 YGFDRMIMFLAGTENIKDVIAFPKNQNAYCPLTEAPNVVDEKQLGELGIALQKQK 593


>gi|332071383|gb|EGI81877.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 587

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 348/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R  YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 VNDDTRLHYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+ L+     +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVKGVDFKVFSEALA----VKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQ-EELTTALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|322388563|ref|ZP_08062164.1| aspartate--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140602|gb|EFX36106.1| aspartate--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 626

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 230/597 (38%), Positives = 348/597 (58%), Gaps = 17/597 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           +  R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+     +
Sbjct: 39  NMKRSMYAGRVREEHIGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEKVSAGV 98

Query: 62  ---AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
              A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    
Sbjct: 99  MATAESLRSEFVIEVTGQVEAR--EQANDKLATGAVELNVTALTVLNTAKTTPFEIKDGI 156

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGAR
Sbjct: 157 EANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGAR 216

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D
Sbjct: 217 DYLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVD 275

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  ++
Sbjct: 276 LETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFEML 334

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + ++T+     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA+
Sbjct: 335 LQDLTDLVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAW 390

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +     E       GPVAK L  +  + +   L ++D D   F+A       +     R 
Sbjct: 391 VKVVDGELN-----GPVAKFLTSIQGD-LTSALGLEDKDLVLFVADTLEVANATLGALRG 444

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++
Sbjct: 445 RIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQADTAHELEGDLAKVR 504

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G +R +  E+  + F  +G S E   ++FG L  A   G PPHGG
Sbjct: 505 AIAYDIVLNGYELGGGSLRINQKELQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGG 564

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           +A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ ++ 
Sbjct: 565 LAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELNLQVEQDE 621


>gi|301301178|ref|ZP_07207334.1| aspartate--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300851177|gb|EFK78905.1| aspartate--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 590

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 216/594 (36%), Positives = 333/594 (56%), Gaps = 10/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT   G +    +   V L GWV + R  G +IF+D+RD  GI Q+V + +      ++A
Sbjct: 3   RTTYAGLVDEKYLDQEVCLKGWVQKRRNLGNLIFIDLRDIEGIVQLVFSQEFNPEALKVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +RSE+V+ + G V++R  + IN N+ TG++E+    IEIL+ A+  P  +  +    +
Sbjct: 63  EQLRSEYVIEVKGKVVARGEKAINPNMRTGKVEVEVSDIEILNKAKTTPFDIADDINASD 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLRR  + K ++ R RI  ++   +   +F++  TP LT S+PEGARD+LV
Sbjct: 123 DLRLQYRYLDLRRPEMQKALMIRNRITQTVHSYLDENHFLDIETPYLTRSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R DR P EF Q+D+E S
Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E +L+ V +E  + +       RI +++A+ R+G+DKPD+R  + + ++
Sbjct: 242 FMSAEEIQEMTEGLLKRVMKETLDVDI-KTPIQRITWNEAMDRFGSDKPDIRFGMELKDM 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +    +++F+VF   L      +   +P      +R   +   E+ +  G  GLA++   
Sbjct: 301 SSAVQNADFKVFDMTLENGGQVKAITVPGGADKYSRKQIEEKQEYIKRFGAKGLAWVKVT 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK       E I+   + + GD   F+A +           R  IA+
Sbjct: 361 DD-----GLTGPIAKFFT-ERAEDIKAAAEAKSGDLILFVASNRKVVADSLGYLRVAIAK 414

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E+ +IN + F F W++D+P +E++EE  +   AH+PFTMP      L   D     A  Y
Sbjct: 415 EMDMINKDEFAFIWVVDWPLFEYSEEFDRYIAAHHPFTMPNEEDLDLLETDPHKCHAQSY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  ++    F  +G +KE  E +FG    A   G PPHGG+A G
Sbjct: 475 DIVLNGYELGGGSIRIHRRDIQEAMFKALGFTKEKAEEQFGWFMDALDFGFPPHGGLALG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR  MLL G  N+REV  FP +    + L  +PSTV+ +QL EL L+     +
Sbjct: 535 LDRFAMLLAGKDNIREVIAFPKNSKASEPLTHAPSTVAPKQLNELYLKTDVPEE 588


>gi|198274757|ref|ZP_03207289.1| hypothetical protein BACPLE_00916 [Bacteroides plebeius DSM 17135]
 gi|198272204|gb|EDY96473.1| hypothetical protein BACPLE_00916 [Bacteroides plebeius DSM 17135]
          Length = 587

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 227/599 (37%), Positives = 341/599 (56%), Gaps = 18/599 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            +R+H+CG+L ++D G  V L+GWV R R  GG+ F+D+RD YGITQ+V N +      E
Sbjct: 1   MFRSHTCGELRLADAGKNVTLAGWVQRARKMGGMTFVDLRDRYGITQLVFNTEVNAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  RS++  NANI TG+IE+   ++ IL+ A+  P  +    + 
Sbjct: 61  RANHLGREFVIQVKGTVSERSSK--NANIPTGEIEIIVSELNILNSAQTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + KN+  R R+   +R  + ++ F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRTAVRKNLELRHRMTMEVRRYLDSKGFLEVETPMLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI+NT E + + +F+E      ++  FLR+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDIINTFEGMAKHLFKELRGVE-LTEPFLRMPWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAY 358
            + +      F VF     +                 R   D++ E+ +    G  G+ Y
Sbjct: 297 ELMDVLKGYGFSVFDNAAYIGG-----ICAEGAAHYTRKQLDQLTEFVKRPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  G V     V K  +    + ++     + GD    ++GD   K      + R
Sbjct: 352 A--RIEADGTVK--SSVDKFYSQEVLQKMKEAFGAKPGDLILILSGDDAMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  ++
Sbjct: 408 LEMGNQLGLRDKNKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H S +  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVINGVEVGGGSIRIHDSALQAKMFEILGFTPEKAQEQFGFLMNAFKFGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+A G+DR V L  G  ++R+   FP + +  D+++ +P  +  +QL EL L+I     
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGFLDQKQLDELNLKIDLKEN 586


>gi|77405125|ref|ZP_00782224.1| aspartyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77410832|ref|ZP_00787189.1| aspartyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77163050|gb|EAO74004.1| aspartyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77176268|gb|EAO79038.1| aspartyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 583

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 229/592 (38%), Positives = 342/592 (57%), Gaps = 17/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACF 59
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  GI Q+V NP+    +  
Sbjct: 1   MKRSMYAGRVRSEHIGTSITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSASVM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G+V +R  E  N N+ TG++EL  Q++ +L+ ++  P  +    E
Sbjct: 61  ATAESLRSEFVIEVSGVVTAR--EQANDNLPTGEVELKVQELSVLNTSKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 ANDDTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I + +E ++  V ++      VS  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDIVEGMIAKVMKDTKGLE-VSLPFPRMAYDDAMNNYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+        +   +  K    +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTEVVKEVDFKVFSEA----SVVKAIVVKNKADKYSRKNIDKLTEIAKQYGAKGLAWL 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  +        GPVAK L  +    +   L +++ D   F+A             R  
Sbjct: 353 KYADN-----TISGPVAKFLTAIEGR-LTEALQLENNDLILFVADSLEVANETLGALRTR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +I+ + F F WI+D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IAKELELIDYSKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTAETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  +   + F  +G S E  + +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDTQERMFKALGFSAESAQEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L +
Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEQQLEELSLTV 578


>gi|25012098|ref|NP_736493.1| aspartyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|77408131|ref|ZP_00784877.1| aspartyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|46577262|sp|Q8E2Q7|SYD_STRA3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|24413642|emb|CAD47719.1| aspartyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|77173231|gb|EAO76354.1| aspartyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 583

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 228/592 (38%), Positives = 342/592 (57%), Gaps = 17/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  GI Q+V NP+     + 
Sbjct: 1   MKRSMYAGRVRSEHIGTSITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVAASVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G+V +R  E  N N+ TG++EL  Q++ +L+ ++  P  +    E
Sbjct: 61  ATAESLRSEFVIEVSGVVTAR--EQANDNLPTGEVELKVQELSVLNTSKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 ANDDTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I + +E ++  V ++      VS  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDIVEGMIAKVMKDTKGLE-VSLPFPRMAYDDAMNNYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+        +   +  K    +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTEIVKEVDFKVFSEA----SVVKAIVVKDKADKYSRKNIDKLTEIAKQYGAKGLAWL 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  +        GPVAK L  +    +   L +++ D   F+A             R  
Sbjct: 353 KYVDN-----TISGPVAKFLTAIEGR-LTEALQLENNDLILFVADSLEVANETLGALRTR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IAKELELIDYSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTAETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  +   + F  +G S E  + +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDTQERMFKALGFSAESAQEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L +
Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEQQLEELSLTV 578


>gi|227499572|ref|ZP_03929679.1| aspartate--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227218331|gb|EEI83585.1| aspartate--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 582

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 219/593 (36%), Positives = 344/593 (58%), Gaps = 12/593 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           M   RT+ CGDL V +VG  V L GWV + R  G ++F+D+RD  GITQ+V  + D   +
Sbjct: 1   MEFKRTNMCGDLRVENVGDSVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVVRDEDKDNY 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A+S+  E+VL + G V  R  E+ N +I TG+IE+ A KI IL  A+  P+ +  + +
Sbjct: 61  EKARSLAQEYVLEVKGTVHER--ESKNPDIATGEIEIIADKINILDRAKTPPIYIKDDDD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E++R KYR+LDLR+ ++ +N+  R+ I+ ++R  M    F E  TP LT  +PEGARD
Sbjct: 119 VSENLRLKYRYLDLRKASVQRNLKLRSDIVRTIREYMYNNEFTEVETPFLTKPTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+N+G FYALPQ+PQ  KQ+LM    DRYFQ+  CFRDED R++R P EF QLDM
Sbjct: 179 YLVPSRINEGKFYALPQSPQLLKQILMIGSLDRYFQVVKCFRDEDLRANRQP-EFTQLDM 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF +QDD++   E +L+ +F+++++ + +     R+ Y +AI  YG+DKPDLR    +
Sbjct: 238 EMSFSDQDDVIAMNEGLLKELFDKYTDYD-LKLPIDRMDYSEAINSYGSDKPDLRYGYKI 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V+E F  S+F+VF+   S           A     +R   D++ ++ +  G  GL+YI
Sbjct: 297 QDVSEIFKDSDFKVFADNTSDGKSVRAINFKAIADNYSRKQLDKLTDFVKDYGLKGLSYI 356

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +      +      + K L       ++ +L ++DGD     A             R  
Sbjct: 357 KY------SDEVQSSIKKFLTDEVLANLKEKLAIEDGDLILLAADKNKVVLDAMGALRRK 410

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A++  +I    F  CW+++FP +E++EEE +    H+PFTMP      L   +   ++ 
Sbjct: 411 VAKDNNLIEKE-FALCWVVNFPMFEYSEEEDRYVAQHHPFTMPNEEDIDLLLTEPEKVRT 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G +R + S++  + F  + +S+E ++N+FG    A Q G PPH G+
Sbjct: 470 QAYDIVINGDEMGGGSVRINNSDLQEKVFEALKLSEEDIKNKFGFFIEALQYGTPPHAGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VML    +N++++  FP +Q+    L  +PS V  + L+EL +++ 
Sbjct: 530 AYGLDRLVMLFAKTENIKDIIAFPKTQSATCPLTEAPSIVDEKALKELNIKLR 582


>gi|22538241|ref|NP_689092.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76798548|ref|ZP_00780781.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77414043|ref|ZP_00790214.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|46577260|sp|Q8DWV5|SYD_STRA5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|22535154|gb|AAN00965.1|AE014287_5 aspartyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76586112|gb|EAO62637.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77159925|gb|EAO71065.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 583

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 229/592 (38%), Positives = 342/592 (57%), Gaps = 17/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACF 59
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  GI Q+V NP+    +  
Sbjct: 1   MKRSMYAGRVRSEHIGTSITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSASVM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G+V +R  E  N N+ TG++EL  Q++ IL+ ++  P  +    E
Sbjct: 61  ATAESLRSEFVIEVSGVVTAR--EQANDNLPTGEVELKVQELSILNTSKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 ANDDTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I + +E ++  V ++      VS  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDIVEGMIAKVMKDTKGLE-VSLPFPRMAYDDAMNNYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+        +   +  K    +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTEIVKEVDFKVFSEA----SVVKAIVVKDKADKYSRKNIDKLTEIAKQYGAKGLAWL 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  +        GPVAK L  +    +   L +++ D   F+A             R  
Sbjct: 353 KYADN-----TISGPVAKFLTAIEGR-LTEALQLENNDLILFVADSLEVANETLGALRTR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IAKELELIDYSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTAETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  +   + F  +G S E  + +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDTQERMFKALGFSAESAQEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L +
Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEQQLEELSLTV 578


>gi|300214568|gb|ADJ78984.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 590

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 216/594 (36%), Positives = 331/594 (55%), Gaps = 10/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT   G +    +   V L GWV + R  G +IF+D+RD  GI Q+V + +      ++A
Sbjct: 3   RTTYAGLVDEKYLDQEVCLKGWVQKRRNLGNLIFIDLRDIEGIVQLVFSQEFNPEALKVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +RSE+V+ + G V++R  + IN N+ TG++E+    IEIL+ A+  P  +  +    +
Sbjct: 63  EQLRSEYVIEVKGKVVARGEKAINPNMRTGKVEVEVSDIEILNKAKTTPFDIADDINASD 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLRR  + K ++ R RI  ++   +   +F++  TP LT S+PEGARD+LV
Sbjct: 123 DLRLQYRYLDLRRPEMQKALMIRNRITQTVHSYLDENHFLDIETPYLTRSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R DR P EF Q+D+E S
Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E +L+ V +E  + +       RI +++A+ R+G+DKPD+R  + + ++
Sbjct: 242 FMSAEEIQEMTEGLLKRVMKETLDVDI-KTPIQRITWNEAMDRFGSDKPDIRFGMELKDM 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +    ++ F+VF   L      +   +P      +R   +   E+ +  G  GLA++   
Sbjct: 301 SSAVQNAGFKVFDMTLENGGQVKAITVPGGADKYSRKQIEEKQEYIKRFGAKGLAWVKVT 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK       E I+   + + GD   F+A +           R  IA+
Sbjct: 361 DD-----GLTGPIAKFFT-ERAEDIKAAAEAKSGDLILFVASNRKVVADSLGYLRVAIAK 414

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E+ +IN + F F W++D+P +E++EE  +   AH+PFTMP      L   D     A  Y
Sbjct: 415 EMDMINKDEFAFIWVVDWPLFEYSEEFDRYIAAHHPFTMPNEEDLDLLETDPHKCHAQSY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  ++    F  +G  KE  E +FG    A   G PPHGG+A G
Sbjct: 475 DIVLNGYELGGGSIRIHRRDIQEAMFKALGFIKEKAEEQFGWFMDALDFGFPPHGGLALG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR  MLL G  N+REV  FP +    + L  +PSTV+ +QL EL L+     +
Sbjct: 535 LDRFAMLLAGKDNIREVIAFPKNSKASEPLTHAPSTVAPKQLDELYLKTDVPEE 588


>gi|227890855|ref|ZP_04008660.1| aspartyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867264|gb|EEJ74685.1| aspartyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 590

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 216/594 (36%), Positives = 332/594 (55%), Gaps = 10/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT   G +    +   V L GWV + R  G +IF+D+RD  GI Q+V + +      ++A
Sbjct: 3   RTTYAGLVDEKYLDQEVCLKGWVQKRRNLGNLIFIDLRDIEGIVQLVFSQEFNPEALKVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +RSE+V+ + G V++R  + IN N+ TG++E+    IEIL+ A+  P  +  +    +
Sbjct: 63  EQLRSEYVIEVKGKVVARGEKAINPNMRTGKVEVEVSDIEILNKAKTTPFDIADDINASD 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLRR  + K ++ R RI  ++   +   +F++  TP LT S+PEGARD+LV
Sbjct: 123 DLRLQYRYLDLRRPEMQKALMIRNRITQTVHSYLDENHFLDIETPYLTRSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R DR P EF Q+D+E S
Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E +L+ V +E  + +       RI +++A+ R+G+DKPD+R  + + ++
Sbjct: 242 FMSAEEIQEMTEGLLKRVMKETLDVDI-KTPIQRITWNEAMDRFGSDKPDIRFGMELKDM 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +    ++ F+VF   L      +   +P      +R   +   E+ +  G  GLA++   
Sbjct: 301 SGAVQNAGFKVFDMTLENGGQVKAITVPGGADKYSRKQIEEKQEYIKRFGAKGLAWVKVT 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK       E I+   + + GD   F+A +           R  IA+
Sbjct: 361 DD-----GLTGPIAKFFT-ERAEDIKAAAEAKSGDLILFVASNRKVVADSLGYLRVAIAK 414

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E+ +IN + F F W++D+P +E++EE  +   AH+PFTMP      L   D     A  Y
Sbjct: 415 EMDMINKDEFAFIWVVDWPLFEYSEEFDRYIAAHHPFTMPNEEDLDLLETDPHKCHAQSY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  ++    F  +G +KE  E +FG    A   G PPHGG+A G
Sbjct: 475 DIVLNGYELGGGSIRIHRRDIQEAMFKALGFTKEKAEEQFGWFMDALDFGFPPHGGLALG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR  MLL G  N+REV  FP +    + L  +PSTV+ +QL EL L+     +
Sbjct: 535 LDRFAMLLAGKDNIREVIAFPKNSKASEPLTHAPSTVAPKQLDELYLKTDVPEE 588


>gi|311113681|ref|YP_003984903.1| aspartate--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310945175|gb|ADP41469.1| aspartate--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 590

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 225/603 (37%), Positives = 328/603 (54%), Gaps = 29/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L  +++G  V L+GWV R R HGG+ F+D+RD  G+TQ V        +  + 
Sbjct: 3   RTHTNGELTAANIGETVTLTGWVARRRDHGGVAFVDLRDRAGVTQCVF----HNEDDFEH 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL + G V  R     N N+ TG+IE+    +E+L+ A  LP  +    E  E  
Sbjct: 59  LRNEYVLRVTGQVTKRPEGNENPNLATGEIEVEVSAVEVLNTAAPLPFQIDEHVEVGEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR    + +  R+    + R  +  + ++E  TP LT S+PEGARDFLVP+
Sbjct: 119 RLRYRYLDLRRPEPARIMRLRSDANRAARNLLADDGYLEVETPTLTRSTPEGARDFLVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLL   G ++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDDI++  E ++  V+        +     R+ Y +A+ +YGTDKPDLR  + +  +T+
Sbjct: 238 DQDDIIDLGERIVEAVWNLI--DVQIPRPIRRMTYTEAMEKYGTDKPDLRFGLELTELTD 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F ++ FRVF         Y    +   G    R   D   EWA+ +G  GLAY+  +  
Sbjct: 296 YFANTTFRVFKAP------YVGAVVMPGGASQPRRTLDAWQEWAKQRGAKGLAYVLVQ-- 347

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK++       +        GD  FF AG+  +  +    AR  I    
Sbjct: 348 EDGELT--GPVAKNITDEERAGLAAATGANPGDCIFFAAGEAKQARALLGAARVEIGHRT 405

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGMESLKGNDL 474
           G+I    + F W++D P +E   E                 H+ FT P+         D 
Sbjct: 406 GLIKDGEWSFLWVVDAPLFESAAEATESGDVALGHSAWTAVHHAFTAPKPEFLDTFDKDP 465

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD+VCNG EI  G IR H  +V  + F+ +GI +E  + +FG L  AF+ G P
Sbjct: 466 GSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFAVMGIGEEEAQEKFGFLLDAFKYGAP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           P GGIA G DRI+ LL G  ++REV  FP + N  D L  +P+ ++ +Q +E G+     
Sbjct: 526 PMGGIAFGWDRIISLLAGVDSIREVIAFPKTGNGYDPLTAAPAPITPQQRKEAGVDF--K 583

Query: 595 PKK 597
           PKK
Sbjct: 584 PKK 586


>gi|300781081|ref|ZP_07090935.1| aspartate--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300532788|gb|EFK53849.1| aspartate--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 624

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 234/604 (38%), Positives = 329/604 (54%), Gaps = 26/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  GDL     G  V L+GWV R R HGG+IF+D+RD  G  QVV   +S   E A  
Sbjct: 7   RTHLAGDLRKDMDGQTVTLTGWVGRRRDHGGVIFIDLRDRSGYAQVVF-RESDVAEAAHD 65

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV--AEELPLPVFGEREYPE 122
           +RSE+ + + G+V  R   + N N+ +G+IE++A ++E+LS   A    +  F   E  E
Sbjct: 66  LRSEFCVKVTGVVEPRPEGSANPNLASGEIEVNATELEVLSKSAALPFQVEDFSSGEVGE 125

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R +YR+LDLRR+   + +  R++   + R  +    F+E  TP LT S+PEGARDFLV
Sbjct: 126 ETRLRYRYLDLRRERQAEALRLRSKANKAARDVLSKHEFVEIETPTLTRSTPEGARDFLV 185

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R+  GS+YALPQ+PQ +KQLLM +G +RYFQIA C+RDED R+DR P EF QLD+E S
Sbjct: 186 PARLRPGSWYALPQSPQLFKQLLMVAGMERYFQIARCYRDEDFRADRQP-EFTQLDIEAS 244

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+QDDI+   E ++  +++       +     R+ Y +A+ +YG+DKPDLR  I +   
Sbjct: 245 FVDQDDIIELAEEIVVELWKLIG--YEIPTPIPRMTYKEAMEKYGSDKPDLRFDIELVEC 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+ F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAYI   
Sbjct: 303 TDFFKDTTFRVFQN------EYVGAVVMEGGASQPRRQLDAWQEWAKQRGAKGLAYIL-- 354

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G ++  GPVAK++     E I   +  + GD  FF AGD     +    AR  IA 
Sbjct: 355 IGEDGELS--GPVAKNITDAEREGIAAHVGAKPGDCIFFAAGDTKSSRALLGAARGEIAN 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGN 472
           +LG+I+ + + F W++D P +E   +            +    H+ FT P+         
Sbjct: 413 KLGLIDDDAWAFTWVVDAPMFEPAADATASGDVALGNSQWTAVHHAFTSPKPEYLDSFDK 472

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +     A+ YD+VCNG EI  G IR H  +V  + F  +GI  E  + +FG L  AF  G
Sbjct: 473 EPGEALAYAYDIVCNGNEIGGGSIRIHNQDVQKRVFDVMGIGDEEAQEKFGFLLDAFSFG 532

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P  +   Q +E G+   
Sbjct: 533 APPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPGPIPAAQRKETGVDFK 592

Query: 593 ENPK 596
              K
Sbjct: 593 PEKK 596


>gi|206601588|gb|EDZ38071.1| Aspartyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 584

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 239/590 (40%), Positives = 333/590 (56%), Gaps = 10/590 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
            YR+HS  DL     GS V L+GWV  VR HGG++F D+RD  G+ QVV NPD       
Sbjct: 1   MYRSHSTTDLTTLPTGSLVTLAGWVQTVRDHGGLLFFDLRDREGLVQVVVNPDTTPQLVS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +AKS+R EWV+ + G +  R   T N  + TG +E+  Q++ +L+     P PV    E 
Sbjct: 61  LAKSLRDEWVISLHGKIQVRPEGTHNPALPTGSLEVICQEMHVLNTCPTPPFPVDDRIEV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E++R  YR+LD+RR+TL K++  R  + + +R  +    F E  TPILT S+PEGARDF
Sbjct: 121 SETLRLTYRYLDIRRETLRKSLKLRNDLTHFIRNYLHDHAFWEVETPILTRSTPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+ +GSFYALPQ+PQ +KQ+LM  G +RY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRLEKGSFYALPQSPQLFKQILMVGGIERYYQIARCFRDEDLRADRQP-EFTQVDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  D  L  ME +++ +FE+F+        F+R+ Y +A+ +YG+DKPDLR  + + 
Sbjct: 240 ASFLTMDQFLYLMEGMIQSIFEKFTGF-RADRPFVRLTYREAMEKYGSDKPDLRFGLPIG 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           N++E    ++FRVF  +L           P  G   +R   D + +W   QG  GLA+  
Sbjct: 299 NLSEAAGKTQFRVFRDVLDQKGVVLGLRYP-GGAALSRKEIDELTQWTIDQGAKGLAWFK 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                        P+ K         I   L  + GD   FIA         A   R HI
Sbjct: 358 VE-----GETFQSPILKFFPEEAQADIAKVLSPEPGDMLLFIADKGPLARKIAGQLRLHI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
              L +     +   W++DFP +EWNEEE +++  H+PFT P+     L  +D LS+++ 
Sbjct: 413 GDRLKLRRSRDYSLLWVVDFPLFEWNEEENRLEALHHPFTAPRREDIPLLESDPLSVRSD 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG EI  G +RN    +  + F  +GIS E    RFG L  A   G PPH G+A
Sbjct: 473 AYDLVLNGTEIGGGSVRNFEPHLQERLFEKIGISPESARARFGFLLDALTYGAPPHLGMA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G+DR VMLL G  ++R+V  FP +Q    LL  +PS+V   QL+ELG+R
Sbjct: 533 FGLDRFVMLLAGCDSIRDVIAFPKTQKGSCLLTEAPSSVDAVQLKELGIR 582


>gi|24380434|ref|NP_722389.1| aspartyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|46577480|sp|Q8DRV9|SYD2_STRMU RecName: Full=Aspartyl-tRNA synthetase 2; AltName:
           Full=Aspartate--tRNA ligase 2; Short=AspRS 2
 gi|24378460|gb|AAN59695.1|AE015031_11 aspartyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 589

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 223/598 (37%), Positives = 347/598 (58%), Gaps = 17/598 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACF 59
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP    +   
Sbjct: 1   MKRSMYAGAVRSEHIGQELTLKGWVARRRDLGGLIFIDLRDREGIVQLVINPKTASNTVV 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A+S+RSE+V+ + G+++ R  +  N N+ TG +E+   ++ IL+ ++  P  +  + E
Sbjct: 61  KSAESLRSEYVIEVTGMIVER--DQANDNLPTGCVEMQVTQLTILNASQTPPFEIKDKIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + KN   R ++ + +R  +   +FI+  TP+L  S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLKNFKLRAKVTHVIRNYLDDLDFIDVETPMLAKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+++G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRMSRGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I    E ++  V +E      +     +I YD A+  YG+DKPD R  + +
Sbjct: 238 ETSFLSEQEIQEITERLIACVMKEVKGIE-LQLPLPQISYDTAMNNYGSDKPDTRFEMTL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T+   + +F+VFS+     P  +           +R   D++ +  +  G  GLA++
Sbjct: 297 QDLTDLVKNIDFKVFSQA----PAVKAIVAKNAANSYSRKAIDKLTDIVKPFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +   + G     GP+AK L  +  + +  RL ++  D  FF+A D           RNH
Sbjct: 353 KYNDGKIG-----GPIAKFLTTIE-DELIERLQLEANDLVFFVADDLEIANGSLGALRNH 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ    +    DL  ++A
Sbjct: 407 LAKELNLIDHSKFNFLWVVDWPMFEWSEEENRYTSAHHPFTLPQEDTVAELEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E   + F  +G +KE  + +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQRETQERMFKALGFTKESAQKQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR VMLL G +N+REV  FP +    D +  +PS VS +QL EL L++ +N  K
Sbjct: 527 ALGLDRFVMLLAGKENIREVIAFPKNNKASDPMTQAPSLVSDKQLDELYLQVNKNAVK 584


>gi|320182596|gb|EFW57485.1| aspartyl-tRNA synthetase [Shigella boydii ATCC 9905]
          Length = 573

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 213/576 (36%), Positives = 320/576 (55%), Gaps = 7/576 (1%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGLVMSR 80
            L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G V +R
Sbjct: 2   TLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRAR 61

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             + IN ++ TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR  + +
Sbjct: 62  DEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRPEMAQ 119

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
            +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ 
Sbjct: 120 RLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQL 179

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R +
Sbjct: 180 FKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHL 238

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
           + E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + 
Sbjct: 239 WLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAND 296

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
             G         G    R   D    + +  G  GLAYI       G      PVAK LN
Sbjct: 297 PKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINNPVAKFLN 356

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
               EAI  R   QDGD  FF A +           R  + ++LG+ + + +   W++DF
Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDF 416

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H 
Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHN 475

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V 
Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 571


>gi|310829068|ref|YP_003961425.1| aspartyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308740802|gb|ADO38462.1| aspartyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 591

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 224/592 (37%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           YR   CG+L    VG  V+L GW    R  GG++F+D+RD  G  Q+V N +  +  F  
Sbjct: 5   YRNALCGELNTEFVGQTVKLCGWTDTRRNLGGVLFIDLRDRSGKVQLVVNEEVSANAFAE 64

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VR+E+VLCI+G V++R AE +N  + TG+IE+  + + IL  A+  P+ V  + +  
Sbjct: 65  AEKVRNEYVLCIEGEVVNRDAENVNPKMATGEIEVMVKSLTILDTADTPPIYVEDDDKSN 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLR+    K +  R ++ +  R  +  E F+E  TPIL   +PEGARDFL
Sbjct: 125 EAVRLKYRYLDLRKPKNQKMLKTRAQVASIARNFLNDEGFLEIETPILGKPTPEGARDFL 184

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV +G F+ LPQ+PQ +KQ+LM SG DRY+Q+A CFRDED R DR P EF Q+DMEM
Sbjct: 185 VPSRVQKGKFFGLPQSPQLFKQILMISGVDRYYQVAKCFRDEDLRQDRQP-EFTQIDMEM 243

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ +DDIL  MEN++  +F E      +   F+R+ Y +A+ R+G+DKPD R  + + N
Sbjct: 244 SFITKDDILPIMENMIAKIFREVRGIE-LETPFIRMTYQEAMDRFGSDKPDTRFGMELTN 302

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++   +SEF+VFS  +               G  ++     + ++A      GLA+I  
Sbjct: 303 ISDIVENSEFKVFSGAVKKGGSVRAINAKDAQGRLSKKTIKNLEKFAAIYKAKGLAWIDV 362

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E        P+ K ++     AI  R+D + GD  F +A      C+     R  +A
Sbjct: 363 SDGE-----MKSPILKFISEEEKNAIFERMDAEPGDMIFIVADTDEIVCTALGQLRLELA 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L       F F W++DFP  E++ E  +    H+PFT P      L   D   + A  
Sbjct: 418 KKLEFDLSGKFNFLWVIDFPLLEYDAEAGRYVAKHHPFTAPLDKDLPLLETDPSQVHADA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  +V  + F  +G + E    +FG L  A + G PPHGG+A 
Sbjct: 478 YDMVVNGVELGGGSIRIHNQDVQEKMFKALGFTMEDAWKQFGFLLEALKYGTPPHGGLAF 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G+DR++M+L+   N+R+V  FP +QN   L+  +P+   ++QL +LG+ I E
Sbjct: 538 GLDRLIMMLMDIDNIRDVIAFPKTQNHSCLMTDAPAEAQLDQLIDLGISIDE 589


>gi|227514592|ref|ZP_03944641.1| aspartate--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087003|gb|EEI22315.1| aspartate--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 591

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 225/600 (37%), Positives = 336/600 (56%), Gaps = 14/600 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
             RT+  G      +G  V + GWV + R  GG+IF+D+ D  GI Q+V N   D A FE
Sbjct: 1   MKRTNYAGRTSEEQIGQEVVVKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEEEDQAAFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A   R++++L   GLV +R+   +N +I TG+IE+  ++ +IL+ ++  P  V  + + 
Sbjct: 61  VANQARNQYILEARGLVRARAE--VNPDIATGKIEIEVKEAKILAKSQTPPFKVQDDVDA 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR++DLRR  +   +  R+++ + +       +F++  TP LT S+PEGARD+
Sbjct: 119 SEDLRLKYRYVDLRRPKMMNYLKLRSKVTSIVHNYFDNNDFLDVETPELTRSTPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSRV  G FYALPQ+PQ +KQLLMA+G D+Y+QIA CFRDED R DR P EF Q+D E
Sbjct: 179 IVPSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQIAKCFRDEDLRGDRQP-EFTQIDTE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF E ++I    E +++ V +E    + V   F R+ + +A+ +YG+DKPD R  +++ 
Sbjct: 238 MSFAEPEEIQAMAEGLIKRVMKEAVGVD-VPTPFPRMEWQEAMDKYGSDKPDTRFDMLIQ 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++    S F+VFS  ++         +P      +R    +  ++ +  G  GLA++ 
Sbjct: 297 DVSDLVKDSSFKVFSATVADGNFVRAIVVPGGADKYSRKDITKKEDYIKRYGAKGLAWVK 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                       GPVAK LN     A+  RL  + GD   F+AG     C      R  I
Sbjct: 357 VT-----EEGYNGPVAKFLNDD-ANALNERLSAKVGDLVLFVAGSFHVVCDSLGYLRESI 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+EL +I+ N F + W++++P +E++E   K   AH+PFTM             D     
Sbjct: 411 AKELDLIDENKFNYLWVINWPMFEYDEGFGKWIAAHHPFTMLNEDDLKYLEEGEDPHQAH 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG EI  G IR H  EV  + F  +G +KE  + RFG L +A + GMPP GG
Sbjct: 471 AQSYDIVLNGNEIGGGSIRIHDPEVQEKVFKALGYTKEAAQARFGFLIKALENGMPPEGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +A G+DR VMLL  A ++R+V  FP +    + L  +P TV  EQL  L L + E PK+ 
Sbjct: 531 MAFGLDRWVMLLAHADSIRDVIAFPKNSKAVEPLTAAPGTVDDEQLEVLHLNVEEAPKEA 590


>gi|78187180|ref|YP_375223.1| aspartyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|97196773|sp|Q3B3A1|SYD_PELLD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78167082|gb|ABB24180.1| aspartyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 604

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 293/600 (48%), Positives = 397/600 (66%), Gaps = 12/600 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFE 60
           +R+RT  CG LG+   G  VRL GWVHR+R HGG++F+D+RDH GI Q+V  P+    FE
Sbjct: 13  NRFRTDYCGQLGLDGEGREVRLGGWVHRIRDHGGLVFIDLRDHTGICQLVVQPEREELFE 72

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  + +E V+ I+G V++RS+ETIN  + +G IE+    I + S A  LP PV  E + 
Sbjct: 73  LAGRLHAESVITIEGRVVARSSETINPRLASGSIEVVVSAIGVESHARPLPFPVADEVQT 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRF+DLRR+ +H+NI+ R+RI  ++R  +   +FIE  TPILT+SSPEGARDF
Sbjct: 133 SEELRLKYRFIDLRREKIHENIIFRSRISAAIRRYLEERDFIEIQTPILTSSSPEGARDF 192

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM +GF RYFQIAPCFRDED R+DR PGEFYQLDME
Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVAGFPRYFQIAPCFRDEDARADRSPGEFYQLDME 252

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQDD+   +E + R + +  S        F RI Y + +  YGTDKPDLR P+ + 
Sbjct: 253 MAFIEQDDLFEILEGMFRHLTDTMSKKRITRFPFPRISYREVMDSYGTDKPDLRIPLKIE 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +VT  F  S F+VF+   +  PG  V A+  KG G  +R F D+  + AR  G  GLAYI
Sbjct: 313 DVTPMFTDSGFKVFAS--NTKPGCAVKALVLKGRGTESRLFYDKAEKRARELGSAGLAYI 370

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +R          GP+ K +     +A++ +L ++ GD  FF AG     C      R +
Sbjct: 371 QFR-----EEGPKGPIVKFMTEPELQAMKDQLTLETGDVVFFAAGKWEAACKIMGGMRTY 425

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
              +L  ++ +   FCWI+DFP +E+NE+ KK+DF+HNPF+MPQG ME+L+  D L + A
Sbjct: 426 FG-DLFTLDPDELSFCWIVDFPMFEYNEDAKKVDFSHNPFSMPQGEMEALETMDPLDVLA 484

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG IRNH  E+M +AF   G S+E V+ RFG +  AF+ G PPHGGI
Sbjct: 485 YQYDIVCNGIELSSGAIRNHKPEIMYKAFEIAGYSREEVDLRFGHMIEAFKLGAPPHGGI 544

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV--ENPKK 597
           A G+DR+VM+L   +N+REV  FPM+Q   DL+M +PS V+  QLREL +R+   E  KK
Sbjct: 545 APGLDRLVMILRDEQNIREVIAFPMNQQAQDLMMAAPSEVTGAQLRELHIRLDLPEEEKK 604


>gi|73748507|ref|YP_307746.1| aspartyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|97196660|sp|Q3ZX84|SYD_DEHSC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|73660223|emb|CAI82830.1| aspartyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 598

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 242/600 (40%), Positives = 359/600 (59%), Gaps = 12/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           +THSC  L   +VG+ V L+GWVHR R HGG+IF+D+RD  GI QV+ NP+ +  C +I 
Sbjct: 3   KTHSCA-LTQENVGTEVTLAGWVHRRRDHGGVIFIDLRDREGIVQVIFNPEQSAACLDIG 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +RSE+VL + G+V  R A T N  + +G +E+ A   +IL+ A+  P  +  E E  E
Sbjct: 62  KELRSEYVLQVKGVVSHRPAGTENNRMPSGMVEVVAVNAKILNAAKTPPFYINEEVEVDE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LD+RR  +  N++ R + +  MR  +  + FIE  TPIL  S+PEGARD+LV
Sbjct: 122 SLRLKYRYLDIRRQGMKNNLIIRHKAVRFMREFLNDQGFIEIETPILIKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQQ KQLLM +G ++Y+Q+A CFRDED R+DR P EF QLDMEMS
Sbjct: 182 PSRLFPGKFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQP-EFTQLDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++D++  ME++  G+          +  F RI + DA+ +YG DKPDLR  + + ++
Sbjct: 241 FVDEEDMMKLMEDLFTGLVANVRPDMKYNKKFPRISFADAMEKYGCDKPDLRFGMELADI 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+    S F VF  + +     +  + P  GG  N++  + +   A+  G  GL  I   
Sbjct: 301 TDIGASSAFGVFKNVAAQGGAIKAISAPGCGG-YNKSQQEELINLAKKYGAAGLVPISLG 359

Query: 363 LDESGNVAGM------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           + E+G +  +         AK+L +   + I  R   + GD    +AG      +   + 
Sbjct: 360 V-ENGVLKDLTMEMVKSVAAKYLALEEIKTIAERSGAKPGDLILIVAGARKMVNTVLGEM 418

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           RN +A +L + + N   F +++DFP ++W+EE K+ D  H+PFT P      L   D   
Sbjct: 419 RNQLAVKLNLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLESDMPLMDTDPGR 478

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + +  YD+VCNG+EIA G IR H +++  + F  +G + E ++ RFG L  AF+ G PPH
Sbjct: 479 VGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFHLLGYNDEQIDERFGHLLEAFEFGAPPH 538

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A GIDR VMLL G  ++REV  FP +Q   DLL G+PS V  +Q+++L +RI    +
Sbjct: 539 GGVAPGIDRFVMLLAGETSIREVISFPKNQAAQDLLFGAPSVVDDKQIKDLHIRIQAEKE 598


>gi|320102960|ref|YP_004178551.1| aspartyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319750242|gb|ADV62002.1| aspartyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 589

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 232/594 (39%), Positives = 339/594 (57%), Gaps = 10/594 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-A 62
            RTH+CG+L  S +G  V L+GWV   R  GG+ F+D+RD YG+TQ+V  PD +  +  A
Sbjct: 3   KRTHTCGELNASHIGQTVTLNGWVDGWRDLGGLTFIDLRDRYGVTQIVFEPDDSGLQARA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-EREYP 121
           + +R+EWV+ + G+V +R     N  + TG IE+ A  +++ + A+  P  + G   E  
Sbjct: 63  QELRAEWVVGVQGIVAARLPGKENPKLTTGAIEVRATALDVFNQAKTPPFDIRGVAGEAN 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYRFLDLRR    K ++ R R+  ++R  M    F+E  TPIL  S+PEGARDFL
Sbjct: 123 EELRLKYRFLDLRRPEQQKVLILRHRLNQTLRRVMSQHGFLEIETPILGRSTPEGARDFL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ G+FYALPQ+PQ YKQLLM +G+DRYFQIA CFRDED R++R P EF QLD+EM
Sbjct: 183 VPSRIHPGAFYALPQSPQLYKQLLMVAGYDRYFQIARCFRDEDLRANRQP-EFTQLDVEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE +D+L+T+E ++  +  EF+  + +S    R+ Y DA+ RYG D+PDLR  + +H+
Sbjct: 242 SFVEFEDVLDTIELLIVELAREFAGMD-LSRPLPRLDYRDAMERYGVDRPDLRFGMELHD 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           + +   H+EF+VF + L           P      +R   D + E+ ++ G  GL ++  
Sbjct: 301 LADLAAHTEFQVFKQALDYGYRIRGLCAP-GAARYSRKDLDGLTEFVKTLGAKGLVWLKV 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                      GP AK L       +R R   + GD    +A          A  R  + 
Sbjct: 360 EET-----GLNGPAAKFLPESIQTQLRERFQARVGDLMLIVADAEATTHQCLAALRAKLG 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L + +   F F W++ FP   W+ EE +    H+PFTMP      L   D   ++A  
Sbjct: 415 GDLKLYDPASFHFSWVVKFPLLAWDAEEGRFVAEHHPFTMPLPEDLPLLQTDPAKVRAQA 474

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E   G IR H   +  + F  +G++ +  E +FG L  A + G PPHGGIA 
Sbjct: 475 YDLVINGEEAGGGTIRCHDPAIQARIFELLGLTPDQAEEKFGFLLSALRLGAPPHGGIAL 534

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR+VML  G  ++R+   FP +    DL+ G+P+ V   QLR+L ++ + +P
Sbjct: 535 GLDRLVMLFAGLTSIRDCIAFPKTAKGADLMTGAPAPVEPRQLRDLRIKTLVDP 588


>gi|302330840|gb|ADL21034.1| Aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 599

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 240/610 (39%), Positives = 335/610 (54%), Gaps = 28/610 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH  RTH  GDL     G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +    E
Sbjct: 1   MHVLRTHLAGDLRKDTAGQTVTLTGWVSRRRDHGGVIFIDLRDSSGLVQVVFRENDVA-E 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG---- 116
            A  +RSE+ + + G+V +R   + N N+ +G+IE++   +EIL+ A  LP  +      
Sbjct: 60  KAHHLRSEFCIKVTGVVEARPEGSENPNLASGEIEINVNDLEILNEAAALPFQIDDASQS 119

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             E  E  R KYR+LDLRR T    +  R++   + R  +   +F+E  TP LT S+PEG
Sbjct: 120 GGEVGEEARLKYRYLDLRRPTQGGALRLRSKANQAARRVLDTHDFVEIETPTLTRSTPEG 179

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDFLVP+R+  GS+YALPQ+PQ +KQLLM +G + Y+QIA C+RDED R+DR P EF Q
Sbjct: 180 ARDFLVPARLKPGSWYALPQSPQLFKQLLMVAGMEHYYQIARCYRDEDFRADRQP-EFTQ 238

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+EMSFV+QDD++   E ++  +++       +     R+ Y DA+R YG+DKPDLR  
Sbjct: 239 LDIEMSFVDQDDVIALAEEIVSELWKLIG--YNIPTPIPRMTYADAMRLYGSDKPDLRFD 296

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           I +   T++F  + FRVF         Y    +   G    R   D   EWA+ +G  GL
Sbjct: 297 IKIVECTDYFKDTTFRVFQN------EYVGAVVMEGGASQPRRQLDAWQEWAKQRGAKGL 350

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AYI   + E G ++  GPVAK++       I   +  Q GD  FF AGD     +    A
Sbjct: 351 AYIL--VGEDGELS--GPVAKNITESERAGIAAHVGAQPGDCIFFAAGDTKSSRALLGAA 406

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGM 466
           R  IA++LG+I    + F W++D P +E + +            K    H+ FT P+   
Sbjct: 407 RGEIARKLGLIKDGDWAFTWVVDAPLFESSADATASGDVALGHSKWTAVHHAFTSPKPEW 466

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
                 +     A+ YD+VCNG EI  G IR H  +V  + F  +GI++E    +FG L 
Sbjct: 467 LESFDENPGEATAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAREKFGFLL 526

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            AF  G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ + +EQ RE
Sbjct: 527 DAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPIPLEQRRE 586

Query: 587 LGLRIVENPK 596
            G+      K
Sbjct: 587 TGVDFKPKKK 596


>gi|227833220|ref|YP_002834927.1| Aspartyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262184206|ref|ZP_06043627.1| aspartyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|254781728|sp|C3PGN5|SYD_CORA7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|227454236|gb|ACP32989.1| Aspartyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 606

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 240/611 (39%), Positives = 337/611 (55%), Gaps = 29/611 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L     G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +S   E A  
Sbjct: 3   RTHLAGELRKEMAGETVTLTGWVARRRDHGGVIFIDLRDRSGVAQVVF-RESEVAERAHD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYP 121
           +RSE+ + + G+V  R   + NAN+ +G+IE++   +E+L+ +  LP  +       E  
Sbjct: 62  LRSEYCVKVTGVVEPRPEGSANANLASGEIEVNVSDLEVLNKSAALPFQIDDPSSSGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR+  H+ +  R+    + R  + + +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRERQHEALRLRSAANRAAREVLDSHDFTEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E ++  +++       +     R+ Y DA++ YG+DKPDLR  I +  
Sbjct: 241 SFVDQDDVIALAEEIVSALWKLIG--YEIKTPIPRMTYADAMKYYGSDKPDLRFDIKIVE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAYI  
Sbjct: 299 CTEFFKDTTFRVFQN------EYVGAVVMEGGASQPRRQFDAWQEWAKQRGAKGLAYITI 352

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E G +   GPVAK++     E I   +  + GD+ FF AGD     +    AR  IA
Sbjct: 353 A--EDGTLG--GPVAKNITDAEREGIAEHVGAKPGDAIFFAAGDVKSSRALLGAARGEIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGMESLKG 471
           ++L +I    + F W++D P +E   +            K    H+ FT P+        
Sbjct: 409 KKLDLIKDGDWAFTWVVDAPLFEPAADATASGDVALGHSKWTAVHHAFTSPKPEYLDSFD 468

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            +     A+ YD+VCNG EI  G IR H  +V  + F  +GI +E  + +FG L  AFQ 
Sbjct: 469 ENPGEALAYAYDIVCNGNEIGGGSIRIHDQDVQKRVFDVMGIGEEEAQEKFGFLLDAFQF 528

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P T+  EQ +E G+  
Sbjct: 529 GAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPGTIPAEQRKETGVDF 588

Query: 592 VENPKKILKIS 602
              P+K  K +
Sbjct: 589 --KPEKAAKAA 597


>gi|224373072|ref|YP_002607444.1| aspartyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223589148|gb|ACM92884.1| aspartyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 588

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 349/596 (58%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTH C ++  + VG  V L GWV+  R HGG+IF+D+RD  GI Q+VA+P   +   ++A
Sbjct: 2   RTHYCAEVNENLVGQKVELVGWVNSHRDHGGVIFIDLRDKSGIVQIVADPADSTKAHKVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++ E+VL + GLV  R     N  + TG+IE+ A++I I + +E +     G++   E
Sbjct: 62  EEIKDEYVLKVKGLVRLRGEGLENPKLKTGKIEVVAEEIIIENKSE-VLPFQIGDKSVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR        + R+++  ++R    +  F++  TPILT S+PEGARD+LV
Sbjct: 121 ELRLKYRYLDLRDPNSLNTFILRSKVTKAIRDYFESNGFLDVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRIHPGEFYALPQSPQLFKQILMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQVDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE+DD++  +E +++  F+  +    VS    R+ Y +A+ +YG+DKPDLR  + M +V
Sbjct: 240 FVEEDDVIAAIEGMIKEAFK-VAGVE-VSLPIPRMTYAEAMEKYGSDKPDLRFDLPMVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + FV S   +FS I          A+   GG    +R     +  + R  G  GLAYI 
Sbjct: 298 IDEFVDSNNEIFSTIAKDKKNNRFKALKVPGGDKFYSRKMLKELENFVRKFGAKGLAYIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +          GP+ K ++  +   +  +L  + GD  FF AGD      +    R  I
Sbjct: 358 VK-----EEGLKGPIVKFMSEESLNKMIDKLKPEVGDIIFFGAGDKKTVLDYMGRLRVKI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ++G+I+ N ++F WI+DFP +E + +       H+PFTM    M++    D  SI++ 
Sbjct: 413 ANDMGLIDENEYKFTWIVDFPMFEKD-DNGNPTPLHHPFTM--PDMDTWDEEDFESIQSI 469

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+EI  G IR H  E+  + F  +GI +   + +FG L  A + G PPHGG A
Sbjct: 470 AYDLVLNGYEIGGGSIRIHKEEIQEKVFKMLGIDEMEAKEKFGFLLDALKFGAPPHGGFA 529

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+    N+R+V  FP +Q    LL G+P  V   QL+EL +R+ + PK
Sbjct: 530 LGLDRVIMLMTKTDNIRDVIAFPKTQKAQCLLTGAPGEVDKSQLKELHIRV-KKPK 584


>gi|323128234|gb|ADX25531.1| aspartyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 582

 Score =  602 bits (1551), Expect = e-170,   Method: Composition-based stats.
 Identities = 228/595 (38%), Positives = 348/595 (58%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++ 
Sbjct: 1   MKRSMYAGRVREEHIGTTITLKGWVGRRRDLGGLIFIDLRDREGVMQLVINPEDVSSDVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +RSE+V+ ++GLV +R     N  + TG +EL    + IL+ A+  P  +  + E
Sbjct: 61  ATAERLRSEYVIEVEGLVEARQ--QANDKLATGMVELKVSALTILNTAKTTPFEIKDDVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDIVEGMITKVMKETKGID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTETVKGIDFKVFSEA----PAVKAIVVKENADRYSRKDIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G +A  GPVAK L  + TE +  +L + + D   F+A       +     RN 
Sbjct: 353 KVT---DGQLA--GPVAKFLTSIETE-LSSQLKLAENDLVLFVADTLEVANNTLGALRNR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I  +
Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQIESH 581


>gi|295108483|emb|CBL22436.1| aspartyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 598

 Score =  602 bits (1551), Expect = e-170,   Method: Composition-based stats.
 Identities = 234/598 (39%), Positives = 345/598 (57%), Gaps = 12/598 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60
           +RT  C ++    VGS V L GWV + R  GGI+F+D+RD  GI Q++    N D A FE
Sbjct: 9   HRTCRCAEVTKEMVGSKVTLMGWVQKARNKGGIVFVDLRDRSGIMQLIFENGNIDEAGFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ + G V +R    +N N+ TG IEL A+ + IL+ ++  P P+    + 
Sbjct: 69  KAGKLRSEFVIAVTGTVENR-GGAVNENLATGAIELRAESLRILAESDVPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  L +NI+ ++++    R     E F+E  TP+L  S+PEGARD+
Sbjct: 128 KDEIRLKYRYLDLRRPDLQRNIMLKSKVAQLTRKFFTEEGFLEIETPMLGKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ GSFY LPQ+PQ YKQLLM SG+DRY QIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRIHPGSFYGLPQSPQLYKQLLMCSGYDRYIQIARCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E  L  +F+E  + + V     RI + +A+ R+G+DKPD+R  + +H
Sbjct: 247 LSFVDVDDVIDVNERFLAYLFKEVLDVD-VKLPIQRITWQEAMDRFGSDKPDMRFGMELH 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E      F VF   L             +GG   R   D++ E+A+  G  GLAYI 
Sbjct: 306 DVSEVVKDCGFGVFKSALENGGSVRGINAEGQGG-MPRKKIDKLVEFAKGYGAKGLAYIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D           AK +     +A+   ++ + GD   F A             R  +
Sbjct: 365 IAEDG----TRKSSFAKFMTDEEMDALVQAMEGKPGDLLLFAADKNKVIYDVLGALRVEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN-DLLSIKA 479
           A+++ +++ N + F W+ +FP  EWNEEE +    H+PFTM       L  + DL  I+A
Sbjct: 421 AKQMDLLDKNEYRFVWVTEFPLLEWNEEENRYTAMHHPFTMLMDEDIPLIESGDLGKIRA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G +R H +++  + F  +G ++E    +FG L  AF+ G+PPH G+
Sbjct: 481 KAYDIVLNGNEIGGGSVRIHQNDIQEKMFEMLGFTREAAYEQFGFLLNAFKYGVPPHAGL 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VML+    ++R+V  FP  ++   L+  SPS VS +QL ELGL +    ++
Sbjct: 541 AYGLDRLVMLMAKVDSIRDVIAFPKVKDASCLMTESPSRVSEQQLEELGLEVEPETEE 598


>gi|251783487|ref|YP_002997792.1| aspartyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242392119|dbj|BAH82578.1| aspartyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 582

 Score =  602 bits (1551), Expect = e-170,   Method: Composition-based stats.
 Identities = 229/595 (38%), Positives = 349/595 (58%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++ 
Sbjct: 1   MKRSMYAGRVREEHIGTTITLKGWVGRRRDLGGLIFIDLRDREGVMQLVINPEDVSSDVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +RSE+V+ ++GLV +R     N  + TG +EL    + IL+ A+  P  +  + E
Sbjct: 61  ATAERLRSEYVIEVEGLVEARQ--QANDKLATGMVELKVSALTILNTAKTTPFEIKDDVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDIVEGMITKVMKETKGID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTETVKGIDFKVFSEA----PAVKAIVVKENADRYSRKDIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G +A  GPVAK L  + TE +  +L + + D   F+A       +     RN 
Sbjct: 353 KVT---DGQLA--GPVAKFLTAIETE-LSSQLKLAENDFVLFVADTLEVANNTLGALRNR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E+  + F  +G + E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L+I  +
Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEKQLEELSLQIESH 581


>gi|315452904|ref|YP_004073174.1| aspartyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315131956|emb|CBY82584.1| aspartyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 584

 Score =  602 bits (1551), Expect = e-170,   Method: Composition-based stats.
 Identities = 233/595 (39%), Positives = 339/595 (56%), Gaps = 18/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH C  +G + +G  V L GW H  R HGG+IF+D+RD  G+ Q+V +P S  ++ A  
Sbjct: 3   RTHLCAQVGEALLGQRVELCGWCHNYRDHGGVIFIDLRDKSGLVQLVCDPQSPAYQEANL 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR E+VL   G+V  R     N  + TG+IE+  + + I + +   P+   G+    E +
Sbjct: 63  VRHEFVLIAHGIVRLRGEGLENPKLKTGKIEVVLESLRIENKSLTPPI-TIGDSSVNEDL 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YRFLDLR    ++    R+R+  ++R  +   +F+E  TP+L  ++PEGARDFL+PS
Sbjct: 122 RLQYRFLDLRSPKSYEIFKMRSRVAKAVRDCLDNLDFLEIETPMLAKTTPEGARDFLIPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ G+F+ALPQ+PQ +KQLLM +G DRY+QI  CFRDED R+DR P EF Q+D+EMSF 
Sbjct: 182 RVHDGAFFALPQSPQLFKQLLMVAGMDRYYQIVKCFRDEDLRADRQP-EFTQVDVEMSFC 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            Q+D+L   + +L+ VF+       VS  F R+ Y +A+ +YG+DKPDLR  + +  V +
Sbjct: 241 TQEDVLEVAQTLLQTVFKSVG--VEVSTPFKRMDYMEAMEKYGSDKPDLRFELPLVEVGD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWR 362
            FV S   +F  I S +      A+   GG    +R +      + RS G  GLAY+  +
Sbjct: 299 LFVDSSNEIFRSIASDSKKNRFKALCVPGGDSFCSRKYLSEAESFVRSFGAQGLAYLQIK 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                     GP+ K L+    E +  R   Q GD  FF AG       +    R  + Q
Sbjct: 359 -----PEGAKGPLVKFLSPERLEELLARTQAQVGDILFFGAGAKKVVWDYMGRLRLKLGQ 413

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+I+ N F   W++DFP +E  E   K+  AH+PFTMP+     L+  DL  +++  Y
Sbjct: 414 DLGLIDENVFNLLWVVDFPMFESAE--GKLSAAHHPFTMPK----DLENTDLEEMRSIAY 467

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G +R H  E   + F  +GIS +  + +FG    A + G PPH G A G
Sbjct: 468 DIVLNGVELGGGSVRIHKEETQAKVFELLGISPQEAQEKFGFFLEALKYGAPPHAGFALG 527

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +DR+VMLL    ++R+V  FP +Q    LL  +PS  S EQLREL +R+  NPK+
Sbjct: 528 LDRLVMLLAKVPSIRDVIAFPKTQKATCLLSQAPSEASEEQLRELHIRLR-NPKR 581


>gi|227529154|ref|ZP_03959203.1| aspartate--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227350998|gb|EEJ41289.1| aspartate--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 595

 Score =  602 bits (1551), Expect = e-170,   Method: Composition-based stats.
 Identities = 219/596 (36%), Positives = 335/596 (56%), Gaps = 12/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
             RT+  G+     VG  V L GWV + R  GG+IF+D+ D  GI Q+V N       F+
Sbjct: 1   MKRTNYAGETSEKQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKENPEAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA +VR+++VL + G V  R+ + IN  + TG++E++  +I++L+ +E  P  +  + + 
Sbjct: 61  IANAVRNQYVLEVQGKVQLRAEKEINPEMKTGKVEVAVDQIKVLAKSETTPFDIVDDVDA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + KN++ R+++ + +      E F++  TP LT S+PEGARD+
Sbjct: 121 SEDLRMKYRYLDLRRPEMMKNLMLRSKVTSVVHHYYDNEGFMDVETPDLTRSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSRV  G FYALPQ+PQ +KQLLMA+G D+Y+QIA CFRDED R DR P EF Q+D E
Sbjct: 181 IVPSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQIARCFRDEDLRGDRQP-EFTQIDTE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF   +DI    E +++ V +E    + V   F R+ + +++ +YG+DKPD R  +++H
Sbjct: 240 MSFATPEDIQTVTEGLIKKVMKEVLGVD-VKTPFPRMEWQESMDKYGSDKPDTRFGMLIH 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +++     S F+VFS  ++         +P      +R    +  E+ +  G  GLA++ 
Sbjct: 299 DLSSIVKDSSFKVFSGTVAKGNFVRAICVPGGADKYSRKDISKKEEYIKRFGAKGLAWVK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+AK +N    +AI   +  + GD   F+AG     C      R  I
Sbjct: 359 VTED-----GYSGPIAKFIND-KADAINAEMGAKSGDLILFVAGSFHVVCDALGYLRREI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478
           ++E  +I  N + + W++++P +E++E   K   AH+PFTM          N  D     
Sbjct: 413 SKEQDMIAPNQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLENGEDPHKAH 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD++ NG EI  G IR H  +V  +    +G +KE  E RFG L +A   GMPP GG
Sbjct: 473 AQSYDIILNGQEIGGGSIRIHDPKVQEKVLKALGYTKERAEARFGFLLKALTLGMPPEGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +A G+DR VMLL  A N+R+V  FP +    + L  +P  VS +QL +L ++  + 
Sbjct: 533 LAFGLDRWVMLLAQADNIRDVIPFPKNSKAVEPLTAAPGKVSQQQLDDLKVQFDDQ 588


>gi|225849655|ref|YP_002729889.1| aspartyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|254781744|sp|C0QT74|SYD_PERMH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225645298|gb|ACO03484.1| aspartyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 605

 Score =  602 bits (1551), Expect = e-170,   Method: Composition-based stats.
 Identities = 234/604 (38%), Positives = 348/604 (57%), Gaps = 16/604 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFE 60
            R + CG+L  +++G  VRL GW   VR HGG+IF+++RD  GI QVV +P       +E
Sbjct: 9   KRDYFCGELTENNIGDEVRLLGWADSVRDHGGVIFINLRDKEGIIQVVIDPSKSPKEAYE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AK VRSE+VL + G V  R A T N  + TG IE++  ++ IL+  + LP P+      
Sbjct: 69  KAKKVRSEYVLAVRGRVQRRPAGTENPKLPTGTIEIAVDELRILNTCDILPFPIEDGISA 128

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YRFLD+RR  + K ++ R  +  + R  +    F+E  TP+LT S+PEGARDF
Sbjct: 129 HEEVRLRYRFLDIRRPEMMKKLILRHEVYQATREYLAGHGFLEVETPMLTKSTPEGARDF 188

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+ +G FYALPQ+PQ +KQ+LM SG DRYFQI  CFRDED R DR P EF Q+D E
Sbjct: 189 LVPARLEKGKFYALPQSPQLFKQILMVSGIDRYFQIVKCFRDEDLRKDRQP-EFTQIDFE 247

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+++D++   E ++  +F++      +   F R+ Y +AI RYGTDKPDLR  + + 
Sbjct: 248 MSFVDEEDVITVSEGLIHYIFKKVLGIE-LKLPFKRMSYTEAIERYGTDKPDLRYSLELK 306

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+     +F+VF   +      +   +   G   +R   D + E A+  G  G+A+I 
Sbjct: 307 DITDIAKDVQFKVFKDTVEKGGIVKGINVK-GGSKFSRKEIDDLTEEAKKYGAKGMAWI- 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +++E G++    P+ K         I+  ++ ++GD   FIA             R H+
Sbjct: 365 -KINEDGSL--QSPIVKFFTEEQINKIKEIMEGENGDLLIFIADSYEITHRVLGFLRKHL 421

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL------ 474
           A++L +I  N +EF W++DFP  EW+EEE ++   H+PFT P+          +      
Sbjct: 422 AEKLKLIPENVWEFVWVVDFPLVEWDEEEGRLVALHHPFTSPKEEDIDRLDEAIQDKKVA 481

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           LS ++  YDLV NG EI  G IR H S +  + F  +GIS E  E +FG L  A + G P
Sbjct: 482 LSFRSRAYDLVLNGEEIGGGSIRIHSSHIQKKVFELLGISDEEAEEKFGFLINALKYGAP 541

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DRIV L+ G++++R+V  FP +Q     L  +P  V  +QL ELG+ +   
Sbjct: 542 PHGGLAFGLDRIVALMTGSESIRDVIAFPKTQKGICPLTDAPDFVQEDQLEELGIEVNIP 601

Query: 595 PKKI 598
            + +
Sbjct: 602 EETV 605


>gi|331265544|ref|YP_004325174.1| aspartyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682216|emb|CBY99833.1| aspartyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 587

 Score =  602 bits (1551), Expect = e-170,   Method: Composition-based stats.
 Identities = 232/596 (38%), Positives = 349/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEMTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E    + V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLMEQEIQDITEGLIARVMKETKGID-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEIVKGVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  + +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQAD-LTAALALEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEDRYMSAHHPFTLPQADTAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|319946029|ref|ZP_08020278.1| aspartate--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319747837|gb|EFW00082.1| aspartate--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 584

 Score =  602 bits (1551), Expect = e-170,   Method: Composition-based stats.
 Identities = 232/598 (38%), Positives = 348/598 (58%), Gaps = 17/598 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP++   E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQELTLKGWVSRRRDLGGLIFIDLRDREGIMQLVINPETVSSEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R    +N  I TG++E+    + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEYVIEVTGQVAARQ--QVNDKIATGKVEMHVSSLTVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 TDLTEVVKCVDFKVFSEA----PAVKAIVVKGAADNYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                        GPVAK L  V TE +   L +++ D   F+A       +     R  
Sbjct: 353 KVADGALN-----GPVAKFLTDVTTE-LTSALQLEEKDLVLFVADTLEVANATLGALRCR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELDLIDNSQFNFLWVVDWPMFEWSEEEDRYMSAHHPFTLPQAETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E+  + F+ +G SKE    +FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKELQERMFTALGFSKEDATEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+ +QL EL L++    ++
Sbjct: 527 ALGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVATKQLEELSLQVEVKTEE 584


>gi|259503167|ref|ZP_05746069.1| aspartate-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259168882|gb|EEW53377.1| aspartate-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 595

 Score =  602 bits (1551), Expect = e-170,   Method: Composition-based stats.
 Identities = 217/589 (36%), Positives = 330/589 (56%), Gaps = 12/589 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
             RT+  G+     VG  V L GWV + R  GG+IF+D+ D  GI Q+V N       F+
Sbjct: 1   MKRTNYAGNTNEQQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKENPEVFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A +VR+++VL + G V  R+ + IN ++ TG++E++   I++L+ +E  P  +    + 
Sbjct: 61  VANAVRNQYVLEVHGKVQLRAEKEINPDMKTGKVEVAVDDIKVLAKSETTPFDIADNVDA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + KN+  R+++ + +      E F++  TP LT S+PEGARD+
Sbjct: 121 SEDLRMKYRYLDLRRPEMMKNLKLRSKVASIVHNYYDGEGFLDVETPDLTRSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSRV  G FYALPQ+PQ +KQLLMA+G D+Y+Q+A CFRDED R DR P EF Q+D E
Sbjct: 181 IVPSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQP-EFTQIDTE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF   +DI    E +++ V +E    + V   F R+ + +A+ +YG+DKPD R  +++H
Sbjct: 240 MSFATPEDIQTVTEGLIKRVMKEVKGID-VKTPFPRMEWQEAMDKYGSDKPDTRFGMLIH 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++    S+F+VFS  ++         +P      +R    +  ++ +  G  GLA++ 
Sbjct: 299 DLSDIVKDSDFKVFSGTVANGGFVRAICVPGGADKYSRKDISKKEDYIKRYGAKGLAWVK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GPVAK LN    + I   +  +DGD   F+A             R  I
Sbjct: 359 VTAD-----GYNGPVAKFLND-KADQINAEMGAKDGDLILFVAASFHVVADSLGYLRRAI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+EL +I  + + + W++++P +E++E   K   AH+PFTM             D     
Sbjct: 413 AEELDMIKPDQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAH 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD++ NG EI  G IR H  +V  +    +G +KE  E RFG L +A   GMPP GG
Sbjct: 473 AQSYDIILNGQEIGGGSIRIHDPKVQEKVLKALGYTKERAEARFGFLLKALTMGMPPEGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           +A G+DR VMLL  A N+R+V  FP +    + L  +P  VS +QL +L
Sbjct: 533 LAFGLDRWVMLLAEADNIRDVIPFPKNSKAVEPLTAAPGKVSQQQLDDL 581


>gi|319786198|ref|YP_004145673.1| aspartyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464710|gb|ADV26442.1| aspartyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 586

 Score =  601 bits (1550), Expect = e-170,   Method: Composition-based stats.
 Identities = 223/590 (37%), Positives = 333/590 (56%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG +  S +G  + L+GW    R  GG+ F+D+RDH GI QV   PD+   F +A 
Sbjct: 2   RTHFCGLVDESLIGQTITLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPDNAEVFPVAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+  E V+ ++G+V +R A  +N  I +G++E+ A +I IL+ A    LP        E 
Sbjct: 62  SLGYEDVIQVEGVVRARHA--VNDKIRSGKVEVIATRITILNKAAP--LPFHAHENPTEE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  + +    R +++ ++R  + A  F +  TPILT ++PEGARDFLVP
Sbjct: 118 TRLRYRYLDLRRPEMQRMQRTRIKLVQALRRHLDAAGFQDIETPILTKATPEGARDFLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLDME +F
Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V + D+ + +E+++R +F+E      +   F R+ + +A+RRYG+DKPDLR  + + +V 
Sbjct: 237 VRERDVQDFVEDMIRAIFKEVVGVE-LEAQFPRMTWAEAMRRYGSDKPDLRIDLELVDVA 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E    S+F VF+   +   G         G   +R   D     A   G  GLAYI  ++
Sbjct: 296 ELVKDSQFAVFTGPANDPDGRVAALRIPGGASLSRKQIDEYAAHAAKFGAKGLAYI--KI 353

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           DE+G ++   P+ K  +     A+   +   +GD  FF AG   K   F    R    ++
Sbjct: 354 DEAGAIS--SPIQKFFSEDAFAALLKHVGAGNGDIVFFGAGGYNKVSDFMGALRLKAGKD 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G++    +   W+ DFP +EW+EEE++    H+PFT P     +       +  +  YD
Sbjct: 412 FGLV-AEGWRPLWVTDFPMFEWDEEEQRYVALHHPFTAPAVDDIAELRAHAKTAVSRGYD 470

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR H  ++    F  +GI  E  E +FG L  A + G PPHGGIA GI
Sbjct: 471 MVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEAEAKFGFLLDALKYGAPPHGGIAFGI 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           DRI  L+ G +++R+V  FP + +   L+ G+PS +   QL E+ + + E
Sbjct: 531 DRIAALMAGTESIRDVIPFPKTTSAQCLMTGAPSPIPAAQLAEVHVTVRE 580


>gi|311739535|ref|ZP_07713370.1| aspartate--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|311305351|gb|EFQ81419.1| aspartate--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 610

 Score =  601 bits (1550), Expect = e-170,   Method: Composition-based stats.
 Identities = 236/614 (38%), Positives = 334/614 (54%), Gaps = 27/614 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L     G  V L+GWV R R HGG+IF+D+RD  GI QVV   +S   E A  
Sbjct: 3   RTHLAGELRKELAGETVTLTGWVSRRRDHGGVIFIDLRDRSGIAQVVF-RESDVAERAHD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYP 121
           +RSE+ + + G V  R   + N N+ +G+IE++   +E+L+ +  LP  +       E  
Sbjct: 62  LRSEYCVKVTGTVEPRPEGSENPNLPSGEIEVNVADLEVLNKSAALPFQIDDPSTSGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR+   + +  R+    + R  + + +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRERQAQALRLRSAANRAARKVLDSHDFAEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G++YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLKPGTWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E ++  +++       +     R+ Y DA++ YG+DKPDLR  I +  
Sbjct: 241 SFVDQDDVIALAEEIVTELWKLIG--YEIKTPIPRMTYADAMKYYGSDKPDLRFDIKIVE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAYI  
Sbjct: 299 CTEFFKDTTFRVFQN------EYVGAVVMEGGASQPRRQFDAWQDWAKQRGAKGLAYIT- 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G +   GPVAK++     E I   +  + GD+ FF AGD     +    AR  IA
Sbjct: 352 -VGEDGTLG--GPVAKNITDAEREGIAEHVGAKPGDAIFFAAGDTKSSRALLGAARGEIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGMESLKG 471
           ++L +I    + F W++D P +E + +            K    H+ FT P+        
Sbjct: 409 KKLDLIKEGDWAFTWVVDAPLFEPSADATASGDVALGHSKWTAVHHAFTSPKPEYLDNFD 468

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            +     A+ YD+VCNG EI  G IR H  +V  + F  +GI  E  + +FG L  AFQ 
Sbjct: 469 QNPGEALAYAYDIVCNGNEIGGGSIRIHQQDVQKRVFDVMGIGDEEAQEKFGFLLDAFQY 528

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ +   Q +E G+  
Sbjct: 529 GAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAAIPAAQRKETGVDY 588

Query: 592 VENPKKILKISVTT 605
               KK    + +T
Sbjct: 589 KPEKKKEQDKAGST 602


>gi|239917780|ref|YP_002957338.1| aspartyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281413727|ref|ZP_06245469.1| aspartyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|259511865|sp|C5CCH2|SYD_MICLC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|239838987|gb|ACS30784.1| aspartyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 604

 Score =  601 bits (1550), Expect = e-170,   Method: Composition-based stats.
 Identities = 226/613 (36%), Positives = 328/613 (53%), Gaps = 36/613 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTHS G+L  S +G  V ++GWV R R HGG+ F+D+RD  G  QVV   ++        
Sbjct: 3   RTHSLGELNASLIGQTVTVTGWVARRRDHGGVAFVDLRDASGFAQVVVRDEAD----FDP 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+EWVL + G V  R     N N+ +G+IEL A+ + +L+ A  LP  V    E  E  
Sbjct: 59  LRNEWVLQVTGTVERRPEGNENPNLPSGEIELIAETVTVLNTAAALPFQVDEHVEVGEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR    + +  R+ +  + R  +  E F+E  TP LT S+PEGARDFLVP+
Sbjct: 119 RLRHRYLDLRRPQPSRIMRLRSEVNRTARELLHGEGFVEVETPTLTRSTPEGARDFLVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLL   G ++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E +++ ++        V     R+ Y +A+ +YG+DKPDLR  + + ++TE
Sbjct: 238 EQDDVIALGEKIVKALWALVG--VDVPTPIRRMTYAEAMEKYGSDKPDLRFGLELTDLTE 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+  +  
Sbjct: 296 YFKDTPFRVFQN------EYVGAVVMPGGASQARRTLDAWQEWAKQRGAKGLAYVLIQ-- 347

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPV+K+++      +   +    GD  FF AG P +  +    AR  I +  
Sbjct: 348 EDGELT--GPVSKNISEEEKAGLAAAVGANPGDCVFFAAGKPKESRALLGAARVEIGRRC 405

Query: 425 GII---------NCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGG 465
           G+              + F W++D P +E   +                 H+ FT P+  
Sbjct: 406 GLFTDAGDGVAAKDADWAFVWVVDAPMFEPAADAVASGDVAVGAGAWTAVHHAFTSPKPE 465

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
                  D  S  A+ YD+VCNG EI  G IR H  +V  + F  +G+S E    +FG L
Sbjct: 466 FADTFDADPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFEVMGLSPEEANEKFGFL 525

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
              F+ G PPHGGIA G DR+V LL G  ++REV  FP +    D L G+P+ ++ +Q +
Sbjct: 526 LEGFKYGAPPHGGIAFGWDRVVALLAGTDSIREVIAFPKTGGGFDPLTGAPAPITAQQRK 585

Query: 586 ELGLRIVENPKKI 598
           E G+     PK+ 
Sbjct: 586 EAGVDAQPEPKQA 598


>gi|148989939|ref|ZP_01821222.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147924724|gb|EDK75809.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 587

 Score =  601 bits (1550), Expect = e-170,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 347/596 (58%), Gaps = 17/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G      +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRAREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N+  R ++ +S+R  +    FI+  TP L+ S+PEGARD
Sbjct: 119 ANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFPRMKYDDAMALYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+     P  +   +       +R   D+M E A+  G  GLA++
Sbjct: 297 QDLTEVVRGVDFKVFSEA----PAVKAIVVTGAADHYSRKDIDKMTEVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E       GPVAK L  +  E +   L ++D D   F+A       +     R  
Sbjct: 353 KVVDGELN-----GPVAKFLTGIQ-EELTTALVLEDKDLVLFVADTLEVANATLGALRGR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+ELG+I+ + F F W++D+P +EW+EEE +   AH+PFT+PQ         DL  ++A
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G S E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR VMLL G +N+REV  FP +    D +  +PSTV+++QL EL L++ E+ 
Sbjct: 527 AIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDE 582


>gi|331090642|ref|ZP_08339493.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330401082|gb|EGG80677.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 599

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 228/596 (38%), Positives = 343/596 (57%), Gaps = 11/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
            R+H C +L  S +G  V + GWV + R  GG++F+D+RD  GI QVV    S   E+ +
Sbjct: 9   KRSHRCAELNSSHIGETVTVMGWVQKNRNKGGLVFVDVRDRSGIVQVVFEEGSVSSELIE 68

Query: 64  S---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +RSE+V+ + G V  RS   +N NI+TG IE+   ++ +LS +E  P P+    + 
Sbjct: 69  KAGSLRSEYVVAVVGKVAKRSG-AVNENIVTGDIEVLPTELRVLSESETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R K R LDLRR  L +N++ R+++    R  +  E F+E  TP+L  S+PEGARD+
Sbjct: 128 KEEVRLKNRVLDLRRPDLQRNLIMRSQVATLTRQFLAEEGFLEIETPMLIKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+QGSFYALPQ+PQ +KQLLM +G+DRYFQI  CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHQGSFYALPQSPQIFKQLLMCAGYDRYFQIVKCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E +L  VF+E  +   VS    R+ + +A+ R+G+DKPD+R  + + 
Sbjct: 247 LSFVDVDDVIDVNERLLAKVFKEILDVE-VSLPIQRMTWQEAMDRFGSDKPDIRFGMELT 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E     EF VF   L             +G    R   D++ ++A+  G  GLAYI 
Sbjct: 306 DVSEVVKDCEFVVFKNALEQGGSVRGINAKGQG-AMPRKKIDKLVDFAKGYGAKGLAYIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D           AK +      A+   +  ++GD   F A           + R  I
Sbjct: 365 IQEDG----TMKSSFAKFMIEEEMTALVNAMGGENGDLLLFAADCNKVVWDVLGNLRLEI 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +++ N ++F W+ +FP  EWNEE  +    H+PFTMP      L   +   ++A 
Sbjct: 421 ARQLELLDKNEYKFLWVTEFPLLEWNEEAGRYTAMHHPFTMPMEEDLHLIDTEPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R    ++  + F  +G +KE  + +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTELGGGSVRIFNQDIQNKMFEVLGFTKEQAQEQFGFLLNAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+    ++R+V  FP  ++  DL+  +P+ V  +QL ELGL IV   K
Sbjct: 541 YGLDRLIMLMAKQDSIRDVIAFPKVKDASDLMTEAPAGVDQKQLDELGLAIVAEEK 596


>gi|167763074|ref|ZP_02435201.1| hypothetical protein BACSTE_01441 [Bacteroides stercoris ATCC
           43183]
 gi|167699414|gb|EDS15993.1| hypothetical protein BACSTE_01441 [Bacteroides stercoris ATCC
           43183]
          Length = 585

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 226/598 (37%), Positives = 336/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            YR+H+CG+L +SDV   V L+GWV R R  GG+ F+D+RD YGITQ+V N +      E
Sbjct: 1   MYRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEVDAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ I G V  R ++  N NI TG IE+   ++ +L+ A   P  +    + 
Sbjct: 61  QANRLGREFVIQIVGTVNERFSK--NKNIPTGDIEIIVSELNVLNSALTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  + KN+  R ++   +R  + ++ FIE  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRAAVRKNLELRHKMTIEVRKYLDSKGFIEVETPLLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++   E + + +F+E      ++  F R+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVQQDDVIELFEGMAKYLFKELRGVE-LTEPFQRMPWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     +                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDIMKGHGFSVFDNAAYIGG-----ICAEGAASYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  G V     V K       + ++     + GD    ++GD + K      + R
Sbjct: 352 A--RVEADGTVK--SSVDKFYTQEVLQEMKAAFGAKPGDLILILSGDDVMKTRKQLNELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   WI+DFP +EW+EEE ++   H+PFT P+     L   D  ++
Sbjct: 408 LEMGNQLGLRDKNKFALLWIVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+VCNG E+  G IR H +++  + F  +G + E  E +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAEEQFGFLMNAFKFGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL L +    
Sbjct: 528 GLAYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSVIDQKQLDELNLIVEVKE 585


>gi|90961830|ref|YP_535746.1| aspartyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|123269933|sp|Q1WTU9|SYD_LACS1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|90821024|gb|ABD99663.1| Aspartyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 590

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 216/594 (36%), Positives = 332/594 (55%), Gaps = 10/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT   G +    +   V L GWV + R  G +IF+D+RD  GI Q+V + +      ++A
Sbjct: 3   RTTYAGLVDEKYLDQEVCLKGWVQKRRNLGNLIFVDLRDIEGIVQLVFSQEFNPEALKVA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +RSE+V+ + G V++R  + IN N+ TG++E+    IEIL+ A+  P  +  +    +
Sbjct: 63  EQLRSEYVIEVKGKVVARGEKAINPNMRTGKVEVEVSDIEILNKAKTTPFDIADDINASD 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLRR  + K ++ R RI  ++   +   +F++  TP LT S+PEGARD+LV
Sbjct: 123 DLRLQYRYLDLRRPEMQKALMIRNRITQTVHSYLDENHFLDIETPYLTRSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLM +G+DRY+QIA CFRDED R DR P EF Q+D+E S
Sbjct: 183 PSRVYPGHFYALPQSPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQP-EFTQIDIETS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I    E +L+ V +E  + +       RI +++A+ R+G+DKPD+R  + + ++
Sbjct: 242 FMSAEEIQEMTEGLLKRVMKETLDVDI-KTPIQRITWNEAMDRFGSDKPDIRFGMELKDM 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +    ++ F+VF   L      +   +P      +R   +   E+ +  G  GLA++   
Sbjct: 301 SGAVRNAGFKVFDMTLENGGQVKAITVPGGADKYSRKQIEEKQEYIKRFGAKGLAWVKVT 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+AK       E I+   + + GD   F+A +           R  IA+
Sbjct: 361 DD-----GLTGPIAKFFT-ERAEDIKEAAEAKSGDLILFVASNRKVVADSLGYLRVAIAK 414

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E+ +IN + F F W++D+P +E++EE  +   AH+PFTMP      L   D     A  Y
Sbjct: 415 EMDMINKDEFAFIWVVDWPLFEYSEEFDRYIAAHHPFTMPNEEDLDLLETDPHKCHAQSY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  ++    F  +G +KE  E +FG    A   G PPHGG+A G
Sbjct: 475 DIVLNGYELGGGSIRIHRRDIQEAMFKALGFTKEKAEEQFGWFMDALDFGFPPHGGLALG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +DR  MLL G  N+REV  FP +    + L  +PSTV+ +QL EL L+     +
Sbjct: 535 LDRFAMLLAGKDNIREVIAFPKNSKASEPLTHAPSTVAPKQLDELYLKTDVPEE 588


>gi|254432783|ref|ZP_05046486.1| aspartyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197627236|gb|EDY39795.1| aspartyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 606

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 224/604 (37%), Positives = 338/604 (55%), Gaps = 26/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H CGDL     G  V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSHGCGDLRQDVTGQEVQLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGADAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           + +R+E V+ + G V  R A+ IN  + TG +E+ A  I +L+  +     P+ V  E  
Sbjct: 62  EHLRNETVIQVTGTVRGRPADAINDKLATGHVEVLASAIGVLNSVKGNLPFPVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR+ ++ N++ R R I + R  +  + FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRERMNGNLLLRARTIQAARRFLEDQGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLDM
Sbjct: 182 YLVPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q+ IL   E ++  +++       +   F R+ + +A+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQEQILELNEALIAHIWKAVKGVE-LPRPFPRLTWQEAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
             V++      F+VFS  ++     +  A+P      +         +   A+  G  GL
Sbjct: 300 VTVSDLVADMGFKVFSGAVAAGGAVKCIAVPGGNDAVSNVRIKPGGDVFSEAQKAGAGGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  R+ E G +  +G +  +L       +  R   + G    F AGD           
Sbjct: 360 AFI--RVREGGEIDTIGAIRDNLTDDKKAELLARTGAEAGTLLLFGAGDTATVNKALDRV 417

Query: 417 RNHIAQELGIINCN----CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
           R ++A+ELG++  +     + F W++DFP +E+N EE +++  H+PF  P  G     G 
Sbjct: 418 RQYLARELGMVQPDSANDRWNFLWVVDFPMFEFNAEENRLEALHHPFCAPNPGD---LGA 474

Query: 473 DLLS-------IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
           D  +        +A  YDLV NG E+  G +R H S +  Q    +G+  E  E +FG L
Sbjct: 475 DPAAWADTLPTARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTIGLPLEEAEAQFGFL 534

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             A   G PPHGG+A G+DRIVMLL G +++R+   FP +Q    L+  +P+ VS +QL 
Sbjct: 535 MEALDMGAPPHGGLAFGVDRIVMLLAGEESIRDTIAFPKTQQARCLMTQAPAGVSPQQLE 594

Query: 586 ELGL 589
           EL +
Sbjct: 595 ELHV 598


>gi|312862480|ref|ZP_07722723.1| aspartate--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322515838|ref|ZP_08068782.1| aspartate--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|311102123|gb|EFQ60323.1| aspartate--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322125724|gb|EFX97046.1| aspartate--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 583

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 227/590 (38%), Positives = 343/590 (58%), Gaps = 17/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP   D+   E 
Sbjct: 3   RSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENADANVVET 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  NAN+ TG +EL  + +++L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGTVEAR--EQANANLPTGAVELKVEDLKVLNTAKTTPFEIKDGVEAS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +++R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHAIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLNEQEIQDITEGLIAKVMKETKGIE-VTLPFPRMSYDDAMNNYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VF++     P  +           +R   D++ E+A+  G  GLA++  
Sbjct: 299 LTEVVKGVDFKVFAEA----PAVKAIVAKGNADKYSRKSIDKLTEFAKQFGAKGLAWVKM 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                      GPVAK L  +  + +   L +++ D   F+A       +     RN IA
Sbjct: 355 TDGA-----LAGPVAKFLTSIE-DKLTDTLHLEENDLVLFVADTHEIANNTLGALRNQIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL +I+   F F W++D+P +EW+EEE +   AH+PFT+P     +    DL  ++A  
Sbjct: 409 KELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDLSKVRAVA 468

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  ++  +    +G S+E    +FG L  A   G PPHGG+A 
Sbjct: 469 YDIVLNGYELGGGSLRINHKDLQERMLKALGFSEESAYEQFGFLLEAMDYGFPPHGGLAI 528

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL L +
Sbjct: 529 GLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHV 578


>gi|300871060|ref|YP_003785932.1| aspartyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300688760|gb|ADK31431.1| aspartyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 587

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 233/593 (39%), Positives = 344/593 (58%), Gaps = 9/593 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           R+++   G L  +D+G  V+L+GWV R R HGG+IF+D+RD  G  Q+V NP+       
Sbjct: 2   RFKSAYNGILTKNDIGKEVKLAGWVLRRRDHGGVIFVDLRDRTGFVQIVFNPEISKEAHN 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ ++G V +RS E IN  I TG+IE+  +K+E+L+ +E  P  +  + + 
Sbjct: 62  NAQDLRSEYVISVEGKVRARSEEMINPKIPTGEIEVMVEKMELLNTSETPPFLLEDDIDT 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR+LDLRR  +  N+ KR  I N+ R  +    FI+  TPIL  S+PEGARDF
Sbjct: 122 GEDIRLKYRYLDLRRTKVFNNLYKRFEITNAFRKHLADNGFIDVETPILNKSTPEGARDF 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQ+PQ +KQ+LM  GF+RY+Q+A CFRDED R+DR P EF Q+D+E
Sbjct: 182 LVPSRLNAGDFYALPQSPQIFKQILMIGGFERYYQVAKCFRDEDLRADRQP-EFTQVDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  D+ L+ ME V+  + ++  N + +   F R+ Y DA+  YG+DKPD R  + + 
Sbjct: 241 TSFLNTDEFLSIMEKVVSNIVKDVYNID-LKTPFPRLNYYDAMEMYGSDKPDTRFELKLI 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV E     +F VF   L                  +R   D   ++    G  GLA++ 
Sbjct: 300 NVEEAVRGCDFAVFKNALDNKFIIRCLNAKGGVDKLSRKDIDDFTKYVGIFGAKGLAWM- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E+G  +    + K  +  N + I      + GD  FF+A  P        + R  +
Sbjct: 359 -RVTENGLESN---IVKFFSEENQKKILEVTKAEKGDLLFFVADTPKVTFDALGNLRLRV 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++L +I+ +   F W+++FP +E++ +EK+I   H+PFT P     ++  ++ L +++ 
Sbjct: 415 AEKLNLIDKDKLNFLWVVEFPLFEYDHKEKRISATHHPFTAPVPEDVAILESEPLKVRSD 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG EI  GG R + S+V    F  +GI +E  + RFG L  A + G PP  G+A
Sbjct: 475 TYDLVLNGNEIGGGGQRIYDSKVQATIFKLLGIDEEKAKIRFGFLLDALKYGAPPMCGMA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            GIDR++MLL    ++REV  FP +Q    L+   PSTV  +QL EL L I E
Sbjct: 535 FGIDRVIMLLQKQDSIREVIAFPKTQKGQCLMSSCPSTVDADQLEELHLSIEE 587


>gi|213964056|ref|ZP_03392298.1| aspartyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213953282|gb|EEB64622.1| aspartyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 584

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 224/598 (37%), Positives = 339/598 (56%), Gaps = 19/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACF 59
            YRTH+CG+L +S     V LSGWV RVR  G +I++D+RD YGITQ++ +    D A F
Sbjct: 1   MYRTHTCGELRLSHEKQQVTLSGWVQRVRNKGFMIWVDLRDRYGITQLIFDEERTDKAVF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E AK++  E V+ I G V+ R A   NANI TG++E+    + +L+ +E  P  +    +
Sbjct: 61  EQAKTLSREDVIQIQGTVIKREAA--NANIPTGEVEILVTALTLLNHSELPPFTIEDNTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR  +  N++ R ++   +R  +  + FIE  TP+L  S+PEGARD
Sbjct: 119 GGEDLRMKYRYLDIRRTPVRDNLIFRHKVGIMVRNYLSEQGFIEVETPVLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNPGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVEQ+D+++T E + + + +E    +  +  F R+ Y +A++ YG DKPD+R  +  
Sbjct: 238 EMSFVEQEDVISTFEGLAKHLLKELKGLDFGA--FPRMTYAEAMKTYGNDKPDIRFGMKF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             + +   H +F+VF++   V                 R   D + EW +    G  G+ 
Sbjct: 296 GELNDLAQHRDFKVFNEAELVVG-----IAVPGANSYTRKEIDALVEWVKRPQVGASGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+    D     +    V K  N  + +A   R   Q GD    ++G   K     +  R
Sbjct: 351 YVKCNEDG----SFKSSVDKFYNEDDLKAWAERTGAQAGDLICILSGKANKVRGQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ LG+   + +   W++DFP  EW+EEE++    H+PFT P+     L  ++  ++
Sbjct: 407 MELAERLGLRKPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDSNPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG E+  G IR    E+  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 467 RANAYDLVLNGNEVGGGSIRIFNQELQAKMFELLGFTPEQAQAQFGFLMNAFKYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G DR+V LL G + +R+   FP + +  D+++ +PS +   QL+EL + +V   
Sbjct: 527 GLAFGFDRLVALLGGQETIRDFIAFPKNNSGRDMMIDAPSPIDEAQLKELAIEMVIKK 584


>gi|319746001|gb|EFV98283.1| aspartate--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 583

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 228/592 (38%), Positives = 342/592 (57%), Gaps = 17/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACF 59
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  GI Q+V NP+    +  
Sbjct: 1   MKRSMYAGRVRSEHIGTSITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSASVM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G+V +R  E  N N+ TG++EL  Q++ +L+ ++  P  +    E
Sbjct: 61  ATAESLRSEFVIEVSGVVTAR--EQANDNLPTGEVELKVQELSVLNTSKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 ANDDTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVNQG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+   +I + +E ++  V ++      VS  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSDQEIQDIVEGMIAKVMKDTKGLE-VSLPFPRMAYDDAMNNYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++TE     +F+VFS+        +   +  K    +R   D++ E A+  G  GLA++
Sbjct: 297 QDLTEIVKEVDFKVFSEA----SVVKAIVVKDKADKYSRKNIDKLTEIAKQYGAKGLAWL 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  +        GPVAK L  +    +   L +++ D   F+A             R  
Sbjct: 353 KYVDN-----TISGPVAKFLTAIEGR-LTEALQLENNDLILFVADSLEVANETLGALRTR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IAKELELIDYSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTAETVHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  +   + F  +G S E  + +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDTQERMFKALGFSAESAQEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L +
Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEQQLEELSLTV 578


>gi|220912776|ref|YP_002488085.1| aspartyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|254781712|sp|B8H9C7|SYD_ARTCA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219859654|gb|ACL39996.1| aspartyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 599

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 227/607 (37%), Positives = 329/607 (54%), Gaps = 27/607 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    +G  V L+GWV R R HGG+ F+D+RD  G+ Q+V   +    E+   
Sbjct: 3   RTHDLGSLRSEHIGQTVTLAGWVGRRRDHGGVAFVDLRDASGVAQIVVREE----EVFHG 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL + G V  R     N  + TG+IE+ A+ + +L+ ++ LP  +    E  E  
Sbjct: 59  LRNEYVLQVTGTVSKRPEGNENPALGTGEIEVIAEDVTVLNTSDPLPFQIDEHVEVGEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R K+R+LDLRR    +NI  R+      R  +  E ++E  TP LT S+PEGARDFLVP+
Sbjct: 119 RLKHRYLDLRRPGPSRNIRLRSEANRVARDLLHHEGYVEIETPTLTRSTPEGARDFLVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLL   GF++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   EN+++ V++       +     RI Y DA+ RYG+DKPDLR    +  +TE
Sbjct: 238 DQDDVIRLGENIVKAVWKLI--DVEIPTPIQRITYADAMARYGSDKPDLRFGQELTELTE 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + F VF         Y    +   G    R   D   EWA+ +G  GLAY+ ++  
Sbjct: 296 FFKDTNFGVFKAP------YVGAVVMPGGASQARRALDAWQEWAKQRGAKGLAYVLYK-- 347

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +A  GPVAK+L       +   +  + GD  FF AG+     +    AR  I    
Sbjct: 348 EDGELA--GPVAKNLTDTERAGLADAVGAKPGDCIFFAAGEKTPSRALLGAARVEIGHRT 405

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDL 474
           G+I+   + FCW++D P +E                +    H+ FT P+         D 
Sbjct: 406 GLIDPTDWAFCWVVDAPMFEPAAAAVASGDVAVGAGQWTAVHHAFTSPKPEFLDTFDKDP 465

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  ++ YD+VCNG EI  G IR H  +V  + F  +G+ KE  + +FG L   F+ G P
Sbjct: 466 ESALSYAYDIVCNGNEIGGGSIRIHQRDVQERVFELMGLDKEDAQTKFGFLLEGFKYGAP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DR+V LL G +++R+V  FP S    D L  +P+ ++ +Q +E G+     
Sbjct: 526 PHGGIAFGWDRVVSLLAGVESIRDVIAFPKSGGGFDPLTAAPAPITAQQRKEAGVDFKPE 585

Query: 595 PKKILKI 601
             K ++ 
Sbjct: 586 AVKPVEA 592


>gi|46446018|ref|YP_007383.1| aspartyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|62287567|sp|Q6ME91|SYD_PARUW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|46399659|emb|CAF23108.1| probable aspartate-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 599

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 236/595 (39%), Positives = 349/595 (58%), Gaps = 12/595 (2%)

Query: 1   MHRYR-THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSA 57
           M  YR +H+CG L    V S V LSGWV+R R HGG+IF+D+RD +G+TQ+V +P     
Sbjct: 5   MFDYRRSHTCGQLRKEKVNSQVTLSGWVNRRRDHGGLIFIDLRDRFGLTQLVFDPIKSPT 64

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
               A+ +RSEWV+ + G V+ R     N  + TG+IE+   +++ILS ++  P  V  +
Sbjct: 65  AHLAAEKLRSEWVISVKGTVIPRQEGMTNPKLPTGEIEIMVHEMDILSKSKTPPFSVSDD 124

Query: 118 -REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             E  E +R KYR+LD+RR  + K ++ R + + ++R  +  + F+E STPIL  S+PEG
Sbjct: 125 LIEVNEELRLKYRYLDIRRGDVAKKLITRHQAMLAVRNYLNNQGFLEISTPILGKSTPEG 184

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSRV  G+FYALPQ+PQ +KQLLM SG DRYFQIA CFRDED R+DR P EF Q
Sbjct: 185 ARDYLVPSRVYPGNFYALPQSPQIFKQLLMISGMDRYFQIAQCFRDEDLRADRQP-EFTQ 243

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +DMEMSF   +D++N +E++++ VF+  SN + V   F R+ +   +  YG D+PDLR  
Sbjct: 244 IDMEMSFGTPEDLMNIVEDLIKTVFKTCSNID-VPTPFKRLSHAICMEEYGCDRPDLRFG 302

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           + +HN+      + F VF   +  N   + + I   G   +R   D   E+    G  GL
Sbjct: 303 MKLHNLNHLAAQTTFSVFLDQIRENGLVKGFCIK-GGADFSRKTIDEYTEFVGRLGVKGL 361

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  + +          + K       + +   ++M+ GD  F IA  P K        
Sbjct: 362 AWIKRQEN-----GLNSSIVKFFPESIHQQLIEEMEMEVGDIIFMIANTPSKTNQALDHL 416

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  IA++  +++ + +EF W+ DFP + WNEEEK++   H+PFT P      L   + L 
Sbjct: 417 RRKIARDRNLVDPHHYEFLWVTDFPLFSWNEEEKRLQSEHHPFTSPHLEDLHLMETNPLK 476

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +++  YD+V NG+EI  G  R H S++  + F  +  S E +E +FG    A   G PPH
Sbjct: 477 MRSSGYDIVLNGYEIGGGSQRIHNSDLQQKIFERLKFSPEELETKFGFFLEALNYGTPPH 536

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GIA G+DRI+M+L   +N+R+V  FP +Q   DL++  PS V+ EQL+EL +R+
Sbjct: 537 LGIALGLDRIIMILTQTENIRDVIAFPKTQKASDLMIECPSPVANEQLKELEIRV 591


>gi|184155309|ref|YP_001843649.1| aspartyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
 gi|238692970|sp|B2GBY7|SYD_LACF3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|183226653|dbj|BAG27169.1| aspartyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 591

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 225/600 (37%), Positives = 336/600 (56%), Gaps = 14/600 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
             RT+  G      +G  V + GWV + R  GG+IF+D+ D  GI Q+V N   D A FE
Sbjct: 1   MKRTNYAGRTSEEQIGQEVVVKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEEEDQAAFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A   R++++L   GLV +R+   +N +I TG+IE+  ++ +IL+ ++  P  V  + + 
Sbjct: 61  VANQARNQYILEARGLVRARAE--VNPDIATGKIEIEVKEAKILAKSQTPPFEVQDDVDA 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR++DLRR  +   +  R+++ + +       +F++  TP LT S+PEGARD+
Sbjct: 119 SEDLRLKYRYVDLRRPKMMNYLKLRSKVTSIVHNYFDNNDFLDVETPELTRSTPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSRV  G FYALPQ+PQ +KQLLMA+G D+Y+QIA CFRDED R DR P EF Q+D E
Sbjct: 179 IVPSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQIAKCFRDEDLRGDRQP-EFTQIDTE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF E ++I    E +++ V +E    + V   F R+ + +A+ +YG+DKPD R  +++ 
Sbjct: 238 MSFAEPEEIQAMAEGLIKRVMKEAVGVD-VPTPFPRMEWQEAMDKYGSDKPDTRFDMLIQ 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++    S F+VFS  ++         +P      +R    +  ++ +  G  GLA++ 
Sbjct: 297 DVSDLVKDSSFKVFSATVADGNFVRAIVVPGGADKYSRKDITKKEDYIKRYGAKGLAWVK 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                       GPVAK LN     A+  RL  + GD   F+AG     C      R  I
Sbjct: 357 VT-----EEGYNGPVAKFLNDD-ANALNERLSAKVGDLVLFVAGSFHVVCDSLGYLRESI 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+EL +I+ N F + W++++P +E++E   K   AH+PFTM             D     
Sbjct: 411 AKELDLIDENKFNYLWVINWPMFEYDEGFGKWIAAHHPFTMLNEDDLKYLEEGEDPHQAH 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG EI  G IR H  EV  + F  +G +KE  + RFG L +A + GMPP GG
Sbjct: 471 AQSYDIVLNGNEIGGGSIRIHDPEVQEKVFKALGYTKEAAQARFGFLIKALENGMPPEGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +A G+DR VMLL  A ++R+V  FP +    + L  +P TV  EQL  L L + E PK+ 
Sbjct: 531 MAFGLDRWVMLLAHADSIRDVIAFPKNSKAVEPLTAAPGTVDDEQLEVLHLNVEEAPKEA 590


>gi|156743714|ref|YP_001433843.1| aspartyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|238686825|sp|A7NQH9|SYD_ROSCS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|156235042|gb|ABU59825.1| aspartyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 589

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 243/592 (41%), Positives = 337/592 (56%), Gaps = 7/592 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YR+H+CG+L V   G  V L+GWVHR R HG +IF+D+RD YG+TQVV +  +A    A
Sbjct: 1   MYRSHTCGELRVEHAGQEVLLAGWVHRRRDHGPLIFIDLRDRYGLTQVVFDSAAAPTAHA 60

Query: 63  K--SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                R E+VL + G V+ R  E  N ++ TG IE+ A +  IL+ A+  PL +  E   
Sbjct: 61  VATDARIEYVLQVRGRVVQRPEEAYNPDLATGMIEVHATEATILNPAKNPPLYINKEGGE 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR KYR+LDLRR+ + +NI+ R RI+  +R  +  E F+E  TPIL  S+PEGARD+
Sbjct: 121 DETIRLKYRYLDLRRERMQRNIILRHRIVKFIRDFLDREGFVEIETPILIKSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQ+PQQ KQLLM +GFDRYFQIA CFRDED R+DR P EF QLDME
Sbjct: 181 LVPSRLHPGKFYALPQSPQQLKQLLMVAGFDRYFQIARCFRDEDQRADRQP-EFTQLDME 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD+L+ +E +   +  E +    +   F R+ + +A+ R+G+DKPDLR  + + 
Sbjct: 240 MSFVDQDDVLDIIERLFTALCREITPHKRLLTPFPRLTFAEAMERFGSDKPDLRYGLELV 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           N+ E    S F V    L      +   +P   G  +R   D + + AR  G  GL +  
Sbjct: 300 NLGETVATSSFGVLRAALDNGGQVKGLRVP-GAGHYSRKQIDEVVDLARQAGAKGLLWAI 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                           K ++     AI  R++   GD    +A  P          R   
Sbjct: 359 VPEMGG---EVRSSFGKQVSPDEMTAIIRRMEGAPGDLLLIVADTPKIVAQTLDRLRREF 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
              L + + N   + W++DFP  EWN+EE++ D  H+PFT P+     L  +D   ++A 
Sbjct: 416 GARLNLADPNTLAWAWVLDFPLVEWNDEEQRWDAVHHPFTAPKDEDLHLMDSDPGKVRAK 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDL+ NG+E   G IR H  +V  + F  +GI +E    +FG +  AF+ G PPHGGIA
Sbjct: 476 AYDLILNGYEAGGGSIRIHQRDVQQRLFDLLGIDRETAMRQFGHMLEAFEYGAPPHGGIA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            GIDRI M+L     +REV  FP +Q   DL+  +PS V   QLREL + + 
Sbjct: 536 PGIDRICMILADEVTIREVMAFPKTQQAVDLMTNAPSPVDERQLRELHIALR 587


>gi|313890356|ref|ZP_07823987.1| aspartate--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121199|gb|EFR44307.1| aspartate--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 582

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 227/595 (38%), Positives = 345/595 (57%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    ++ 
Sbjct: 1   MKRSMYAGHVRSEHIGQELTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEDTNADVV 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+++RSE+V+ + GLV  R     N  + TG +EL    + IL+ ++  P  +    E
Sbjct: 61  KNAEAIRSEYVIEVQGLVQERQ--QANNQLATGSVELKVTALTILNTSKTTPFEIKDAVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +   +FI+  TP+LT S+PEGARD
Sbjct: 119 VGDETRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLDFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V ++    + V   F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDLVEGMIAKVMKDTKGVD-VKLPFPRMAYDDAMNFYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T      +F+VFS+  +     +   +  K    +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTSLVKGLDFKVFSEAQA----VKAIVVKDKADQFSRKDIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                   N +  GPVAK L  V+   +   L + D D   F+A +     +     RN 
Sbjct: 353 K-----KVNDSLTGPVAKFLTEVD-NDLTEALQLVDNDLILFVADELAIANNTLGALRNR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ N F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 LAKELDLIDNNKFNFLWVVDWPMFEWSEEENRYMSAHHPFTLPTEESALELEGDLTKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G +KE    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDMQERMFKALGFTKEDANEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L++  +
Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSDKQLDELSLQVESH 581


>gi|300858570|ref|YP_003783553.1| aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686024|gb|ADK28946.1| Aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
          Length = 599

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 240/610 (39%), Positives = 335/610 (54%), Gaps = 28/610 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH  RTH  GDL     G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +    E
Sbjct: 1   MHVLRTHLAGDLRKDTAGQTVTLTGWVSRRRDHGGVIFIDLRDSSGLAQVVFRENDVA-E 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG---- 116
            A  +RSE+ + + G+V +R   + N N+ +G+IE++   +EIL+ A  LP  +      
Sbjct: 60  KAHHLRSEFCIKVTGVVEARPEGSENPNLASGEIEINVNDLEILNEAAALPFQIDDASQS 119

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             E  E  R KYR+LDLRR T    +  R++   + R  +   +F+E  TP LT S+PEG
Sbjct: 120 GGEVGEEARLKYRYLDLRRPTQGGALRLRSKANQAARRVLDTHDFVEIETPTLTRSTPEG 179

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDFLVP+R+  GS+YALPQ+PQ +KQLLM +G + Y+QIA C+RDED R+DR P EF Q
Sbjct: 180 ARDFLVPARLKPGSWYALPQSPQLFKQLLMVAGMEHYYQIARCYRDEDFRADRQP-EFTQ 238

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+EMSFV+QDD++   E ++  +++       +     R+ Y DA+R YG+DKPDLR  
Sbjct: 239 LDIEMSFVDQDDVIALAEEIVSELWKLIG--YNIPTPIPRMTYADAMRLYGSDKPDLRFD 296

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           I +   T++F  + FRVF         Y    +   G    R   D   EWA+ +G  GL
Sbjct: 297 IKIVECTDYFKDTTFRVFQN------EYVGAVVMEGGASQPRRQLDAWQEWAKQRGAKGL 350

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AYI   + E G ++  GPVAK++       I   +  Q GD  FF AGD     +    A
Sbjct: 351 AYIL--VGEDGELS--GPVAKNITESERAGIAAHVGAQPGDCIFFAAGDTKSSRALLGAA 406

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGM 466
           R  IA++LG+I    + F W++D P +E + +            K    H+ FT P+   
Sbjct: 407 RGEIARKLGLIKDGDWAFTWVVDAPLFESSADATASGDVALGHSKWTAVHHAFTSPKPEW 466

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
                 +     A+ YD+VCNG EI  G IR H  +V  + F  +GI++E    +FG L 
Sbjct: 467 LESFDENPGEATAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAREKFGFLL 526

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            AF  G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ + +EQ RE
Sbjct: 527 DAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPIPLEQRRE 586

Query: 587 LGLRIVENPK 596
            G+      K
Sbjct: 587 TGVDFKPKKK 596


>gi|21232460|ref|NP_638377.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767456|ref|YP_242218.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|24212399|sp|Q8P6E0|SYD_XANCP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|81306564|sp|Q4UXM5|SYD_XANC8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|21114243|gb|AAM42301.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66572788|gb|AAY48198.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 588

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 225/596 (37%), Positives = 333/596 (55%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPAEGDANSAEV 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  I TG++E+ A +I IL+ A    LP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKIRTGKVEVIATRITILNKAAP--LPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEDTRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  +   ++  F R+ + +A+RRYG+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVE-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V E    SEF VF+   +   G         G   +R   D     A   G  GLAY
Sbjct: 296 LVDVAELVKTSEFPVFAAAANDADGRVAALRIPGGATLSRKQIDDYAAHAAKYGAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
              +L E+G V+   P+AK        A+   +   +GD  FF AG   K   F    R 
Sbjct: 356 --SKLSETGEVS--SPIAKFFGEEAFAALLAHVGAANGDIVFFGAGSYNKVSDFMGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              ++ G++    +   W+ DFP +EW+EE ++    H+PFT P     +    +  +  
Sbjct: 412 KAGKDFGLVAAG-WAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTAV 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGG
Sbjct: 471 SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ EQL E+ +++   
Sbjct: 531 IAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAAEQLAEVHVQVRPK 586


>gi|256825079|ref|YP_003149039.1| aspartyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688472|gb|ACV06274.1| aspartyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 610

 Score =  601 bits (1550), Expect = e-169,   Method: Composition-based stats.
 Identities = 230/606 (37%), Positives = 325/606 (53%), Gaps = 26/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+ FLD+RD  G+ QVVA  +      A  
Sbjct: 3   RTHEAGTLRAEHAGQTVTLTGWVARRRDHGGVAFLDLRDASGVAQVVARDEVLESGGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+V+ I G V  R    +N+ + TG+IE+ A ++E+L+ A  LP  +    E  E  
Sbjct: 63  LRNEYVVKIVGEVRVRPEGNVNSELPTGEIEVVAAELEVLNTAAPLPFQIDERVEVGEEA 122

Query: 125 RFKYRFLDLRRD---TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           R K+R+LDLRR    +  + +  R++   + R  +    F+E  TP LT S+PEGARDFL
Sbjct: 123 RLKHRYLDLRRPGKGSAGEALRLRSKANAAARRVLEEHAFVEVETPTLTRSTPEGARDFL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G +YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 183 VPARLAPGKWYALPQSPQLFKQLLMVAGLERYYQIARCYRDEDFRADRQP-EFTQLDIEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV Q+D++   E + R ++        V   F RI Y +A+ +YG+DKPDLR  + + +
Sbjct: 242 SFVTQEDVIALGEEIARALWALIG--VDVPAPFPRITYTEAMEKYGSDKPDLRFDLELTD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+  
Sbjct: 300 CTEFFAETPFRVFQAP------YVGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL- 352

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G ++  GPV+K+++      I      Q GD  FF AG           AR  I 
Sbjct: 353 -VGEDGELS--GPVSKNISDAEKAGIAAHTGAQPGDCIFFAAGPAKAARGLLGAARLEIG 409

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKG 471
              G+I+ + + F W++D P +E   +          E      H+ FT P+        
Sbjct: 410 HRCGLIDQDAWSFLWVVDAPLFEPAADAVASGDVAVGEGAWTAVHHAFTSPRDEWLDSFE 469

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
                  A+ YD+VCNG EI  G IR H  +V  + F  +G+S+E  + +FG L  AF  
Sbjct: 470 EKPGEALAYAYDMVCNGNEIGGGSIRVHRRDVQERIFKVMGLSEEEAQEKFGFLLEAFSY 529

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DRIV LL G+ ++R V  FP S    D L  +P+ +S +Q  E G+  
Sbjct: 530 GAPPHGGIAFGWDRIVALLSGSDSIRNVIAFPKSGGGYDPLTDAPAPISAQQREEAGVDH 589

Query: 592 VENPKK 597
               ++
Sbjct: 590 QPEEEE 595


>gi|118443262|ref|YP_877922.1| aspartyl-tRNA synthetase [Clostridium novyi NT]
 gi|166225341|sp|A0PZX0|SYD_CLONN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|118133718|gb|ABK60762.1| aspartyl-tRNA synthetase [Clostridium novyi NT]
          Length = 593

 Score =  601 bits (1549), Expect = e-169,   Method: Composition-based stats.
 Identities = 223/595 (37%), Positives = 336/595 (56%), Gaps = 13/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG+L  S +G    + GWV R R  GG++F+D+RD  GI QVV     +   FE 
Sbjct: 9   KRTVMCGELRESHIGQKHVVMGWVQRKRNLGGLVFVDLRDREGILQVVFGEEINKEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  V+ E+ + ++G ++ R  E+ N  + TG +EL  Q I+ILS +E  P+ +  + +  
Sbjct: 69  ADLVKPEYCIAVEGELVRR--ESPNEAMPTGMVELKGQNIKILSESETPPIYIKEDLDTD 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR+LDLRR  + K    R +    +R  +    F+E  TP+LT S+PEGARD+L
Sbjct: 127 EAVRLKYRYLDLRRPDMQKIFKVRHKTAKVIRDFLDENGFLEMETPMLTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQ+PQ +KQLLM SG+D+YFQI  CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYPGMFYALPQSPQLFKQLLMVSGYDKYFQITKCFRDEDLRANRQP-EFTQVDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ +D++   E +++ VF+E +N + V     RI Y +A+ +YG+DKPDLR  + +++
Sbjct: 246 SFVDMEDVIALNEKLIQKVFKEVANVD-VQLPIQRITYKEAMDKYGSDKPDLRFGMEIND 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F+VF   +           P       R   D++ E+ ++    GLA+I +
Sbjct: 305 ITDAVKDVDFKVFKDAIENGGSVRAIKAP-NCATMGRKQIDKLGEFVKTYKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + DE        P+AK L       +   LD + GD    +A             R  +A
Sbjct: 364 KEDE-----IKSPIAKFLGEEGINKVIESLDAKVGDLILIVADKDSVVLQSLGALRLEMA 418

Query: 422 QELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           + L I+  N  F F W+ +FP   +NEEE +    H+PFTMP         +D   ++A 
Sbjct: 419 KRLEILKDNKEFRFAWVTEFPLLSYNEEEDRYQAEHHPFTMPMDEDIEYLESDPGRVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F+ +G + E    RFG L  AF+ G PPHGG+A
Sbjct: 479 AYDIVLNGEELGGGSIRIHDTKLQEKMFNVLGFTSESAWERFGFLLEAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G DR++M L G +N+++V  FP +QN    L  +P+ V  +QL ELG+ + +  
Sbjct: 539 YGFDRMIMFLAGTENIKDVIAFPKNQNAYCPLTEAPNVVDEKQLGELGIGVQKQK 593


>gi|270291328|ref|ZP_06197550.1| aspartyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304385080|ref|ZP_07367426.1| aspartate--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|270280174|gb|EFA26010.1| aspartyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304329274|gb|EFL96494.1| aspartate--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 593

 Score =  601 bits (1549), Expect = e-169,   Method: Composition-based stats.
 Identities = 206/600 (34%), Positives = 328/600 (54%), Gaps = 12/600 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             RT   G +    +   V L GWV + R  G +IF+D+RD  GI Q+V + +  +    
Sbjct: 1   MKRTTYAGLVDQQYLDQTVTLKGWVQKRRNLGQLIFIDLRDREGIVQLVFSNEFSADALA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  +RSE+V+ + G+V  R  + +N  + TG+IE+   + +IL+ A+  P  +      
Sbjct: 61  VADQLRSEYVIEVTGVVKQRKPKDVNPKMKTGEIEVEVHEAKILNKAKTPPFDIEDGVNA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + ++ KYR+LDLRR  + K +  R RI  ++   +  + F++  TP LT S+PEGARD+
Sbjct: 121 SDELKMKYRYLDLRRPEMLKGLKIRNRITQAVHSYLDEQGFLDIETPDLTKSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  G FYALPQ+PQ +KQLLM +G DRY+Q+A CFRDED R DR P EF Q+D+E
Sbjct: 181 LVPSRVYPGHFYALPQSPQLFKQLLMGAGIDRYYQLARCFRDEDLRGDRQP-EFTQIDLE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  ++I +  E ++  V ++  + + V   F RI + +++ R+GTD+PD+R  + + 
Sbjct: 240 TSFLTAEEIQDITEGLIARVMKDTLDID-VKLPFDRISWQESMDRFGTDQPDVRFGMELK 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +++E    SEF+VFS  ++     +  A+P      +R   D++ ++    G  GLA++ 
Sbjct: 299 DISEIVADSEFKVFSGAVANGGVVKAIAVPDGAAKLSRKEIDKLAKYVERFGAKGLAWLK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                  +    GPVAK  +    + I  + D + GD   F A             R  +
Sbjct: 359 IT-----DQGFSGPVAKFFDEATEKQIMAKTDAKVGDLLLFAADRKKVVADTLGYLRVEL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+   +I+ + F F W++D+P +E++E +++   AH+PFTMP            D     
Sbjct: 414 AKRFDLIDEDQFAFLWVVDWPLFEYDEGDERWVAAHHPFTMPNEEDLHYLDEGEDPHKAH 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD++ NG E+  G IR +  EV  +    +G + E   ++FG L  A   G PPHGG
Sbjct: 474 AQSYDIILNGLELGGGSIRINTREVQEKMLKALGFTLEKANDQFGYLLTALDYGFPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPKK 597
           +A G+DR   LL    N+R+V  FP +    + +  +P+ VS EQL EL L + +  P+K
Sbjct: 534 LAIGLDRFARLLAKRDNIRDVIAFPKNSKASEPMTEAPTPVSEEQLAELSLDVDIRKPEK 593


>gi|90408547|ref|ZP_01216704.1| aspartyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310366|gb|EAS38494.1| aspartyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 589

 Score =  601 bits (1549), Expect = e-169,   Method: Composition-based stats.
 Identities = 205/594 (34%), Positives = 330/594 (55%), Gaps = 8/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG++  + +G  ++L GW+++ R  GG+ FLD+RD  GI QV  + D+     IA 
Sbjct: 2   RTMYCGEVTEAVIGQEIKLVGWINKQRDLGGVTFLDLRDREGIVQVFFDGDTPEATLIAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           SVR+E+ + I G V +R    +N N+ TG +E+   +IEIL+ +E   LP+   +   E 
Sbjct: 62  SVRNEYCIQIKGQVRARPDGQVNKNMRTGAVEICGIEIEILNRSEP--LPLDSNQNNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  + K +  R+++ + +R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 120 QRLRYRYLDLRRPEMAKRMQFRSKVSSFVRRFLEDNGFLDVETPILTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F+ALPQ+PQ +KQLLM SG D+Y+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRTYKGQFFALPQSPQLFKQLLMMSGLDKYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D+++  ME ++  +F++  + +     F ++ Y +A+RR+G+DKPDLR    + +V 
Sbjct: 239 LSADEVMQKMEEMIVKLFQKMLDVD--LGTFPKMTYAEAMRRFGSDKPDLRIDFELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VFS   +             G   +R   D   ++    G  GLA++    
Sbjct: 297 DLLTEVEFKVFSTPANDKDSRVAVICVPGGAALSRKQIDNYTKYVNIYGAKGLAWMKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
              G      PVAK L+    +A+  R   +DGD   F A             R  +A++
Sbjct: 357 VSKGIDGIQSPVAKFLSAEIVDALLARTQAKDGDILLFGADKEKVVSEAMGALRLKVAED 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++  + ++  W++DFP +E   E+  +   H+PFT P          + +   +  YD
Sbjct: 417 LDLV-GSQWKPLWVIDFPMFE-ALEDGGLTPLHHPFTAPLNLTAKELEANPVGAISNAYD 474

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG E+  G +R H +++    F  + IS    +++FG L  A + G PPH G+A G+
Sbjct: 475 MVLNGCELGGGSVRIHKADMQATIFRILNISDAEAQDKFGFLLEALKYGAPPHAGLAFGL 534

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+VML+    ++REV  FP + +    L  +PS  + + L+EL ++I++   K
Sbjct: 535 DRLVMLMTKTSSIREVIAFPKTASAACPLTNAPSYANPDSLKELNIQIIKEDVK 588


>gi|256375853|ref|YP_003099513.1| aspartyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255920156|gb|ACU35667.1| aspartyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 592

 Score =  601 bits (1549), Expect = e-169,   Method: Composition-based stats.
 Identities = 240/601 (39%), Positives = 333/601 (55%), Gaps = 21/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+IF+D RD  G+ QVV        E A  
Sbjct: 3   RTHEAGTLRAEHAGQSVTLTGWVARRRDHGGVIFIDFRDASGVAQVVFREGEMA-ERAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+VL + G V  R   + N ++ TG IE+ A + E+L+ +  LP  +    E  E  
Sbjct: 62  LRSEFVLKVVGEVSRRPEGSENPDLPTGAIEVYASEFEVLNESAPLPFQLDEHLEVGEEA 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR    K +  R+      R  + +E F+E  TP LT S+PEGARDFLVP+
Sbjct: 122 RLRHRYLDLRRSGPAKAMRLRSEANRIAREVLHSERFVEVETPTLTRSTPEGARDFLVPA 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 182 RLRPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E ++  +++E  + + V+  F RI Y +A+ +YG+DKPDLR  + +  +TE
Sbjct: 241 EQDDVIALGEKIITALWKELGDHD-VAQPFRRISYAEAMAKYGSDKPDLRFGLELTELTE 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 300 YFKDTPFRVFQAP------YVGAVVMPGGASQPRRTLDAWQEWAKQRGAKGLAYVL--VG 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L     + +   +    GD  FF AGD     +    AR  IA  +
Sbjct: 352 EDGTLG--GPVAKNLTDAERDGLAKAVGANPGDCVFFGAGDVDGARALLGAARVEIANRV 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE--------EKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           G+I    + F W++DFP +E  ++          K    H+ FT P          D  +
Sbjct: 410 GLIEEGSWSFVWVVDFPMFEAVDKIGDDVAVGSGKWTALHHAFTSPTPEWVDNFETDPGN 469

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A+ YD+VCNG EI  G IR H ++V  +AF  +GI  E  + +FG L  AF+ G PPH
Sbjct: 470 ALAYAYDIVCNGNEIGGGSIRIHRADVQQRAFDVMGIGAEEAQEKFGFLLDAFKFGAPPH 529

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA G DRI MLL G  ++REV  FP S    D L  +P+ ++ +Q +E G+       
Sbjct: 530 GGIAFGWDRITMLLSGVDSIREVIAFPKSGGGYDPLTAAPAPITPQQRKEAGVDAKPAAP 589

Query: 597 K 597
           K
Sbjct: 590 K 590


>gi|237752831|ref|ZP_04583311.1| aspartyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376320|gb|EEO26411.1| aspartyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 583

 Score =  601 bits (1549), Expect = e-169,   Method: Composition-based stats.
 Identities = 240/596 (40%), Positives = 338/596 (56%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H C DLG  ++G  V L GW +  R HGG++F+D+RD  G+ Q+V +P       +IA
Sbjct: 2   RSHYCADLGEQNIGEVVSLCGWCNTYRDHGGVVFIDLRDRSGLVQLVFDPKDCQEAHKIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL   G V  R     N  + TG+IE+  + + + + +   P+ V G+    E
Sbjct: 62  SEVRDEYVLIAKGKVRRRGEGLENPKLKTGKIEVLVESLVVENKSLTPPIAV-GDESVGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   L +  + R+++  + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 DVRLKYRYLDLRNPRLQEIFITRSKVTQATRNTLSDLGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R DR P EF Q+D+EMS
Sbjct: 181 PSRVHHGEFYALPQSPQLFKQLLMVSGFDRYFQIAKCFRDEDLRLDRQP-EFTQIDLEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   DD++   E VL+ +F       T++  F R  Y + +  YG+DKPDLR  +    V
Sbjct: 240 FCNADDVMGVAEAVLKSIFNACG--ITIATPFERYSYKEVMESYGSDKPDLRFDLPFVEV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + FV S   +F+ I          A+  KGG    +R       E+ R  G  GLAYI 
Sbjct: 298 GDLFVDSSNDIFASIAKDPKKNRFKALCVKGGDTFFSRKTLGEAEEFVRKFGAKGLAYIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +          GP+ K ++  N + +  R     GD  FF AG+      +    R  I
Sbjct: 358 IK-----EEGAKGPLVKFISEANLKILLERAGASVGDIIFFGAGEKKIVWDYMGRLRQKI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           AQ++ +I+ N ++F W++DFP +E N++   I   H+PFTMP      L+  DL  I + 
Sbjct: 413 AQDMDLIDKNAYKFLWVVDFPMFERNDD-GSISALHHPFTMPSN----LEVEDLEEINSV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NGFEI  G IR H  E+  + F  +GISKE  +++F  L  A Q G PPHGG+A
Sbjct: 468 AYDVVLNGFEIGGGSIRIHKQEIQSRVFDLLGISKEEAQDKFSFLLEALQFGAPPHGGLA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DRI+MLL  A ++R+V  FP +Q     L  +PS  + EQLREL +R+ E  +
Sbjct: 528 FGLDRIIMLLCKAHSIRDVIAFPKTQKATCPLTDAPSVANEEQLRELHIRVRETKR 583


>gi|160889604|ref|ZP_02070607.1| hypothetical protein BACUNI_02030 [Bacteroides uniformis ATCC 8492]
 gi|156861121|gb|EDO54552.1| hypothetical protein BACUNI_02030 [Bacteroides uniformis ATCC 8492]
          Length = 585

 Score =  601 bits (1549), Expect = e-169,   Method: Composition-based stats.
 Identities = 223/598 (37%), Positives = 337/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            YR+H+CG+L +SDV   V L+GWV R R  GG+ F+D+RD YGITQ+V N +      E
Sbjct: 1   MYRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  R ++  N +I TG IE+   ++++L+ +   P  +    + 
Sbjct: 61  RANRLGREFVIQVKGTVNERFSK--NQHIPTGDIEIIVSELDVLNSSLTPPFTIEENTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  +  N+  R ++   +R  + ++ FIE  TPIL  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD++N  E + + +F+E          F+R+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQDDVINLFEGMAKYLFKEIRGVEMNE-PFMRMPWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAY 358
            + +      F VF     +                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDIMKGHGFPVFDNAAYIGG-----ICAEGAAHYTRKQLDVLTEFVKRPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  GNV     V K       + ++   + + GD    ++GD   K      + R
Sbjct: 352 A--RVEADGNVK--SSVDKFYAQEVLQEMKAAFNAKPGDLILILSGDDAMKTRKQLNELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW++EE ++   H+PFT P+     L   D  ++
Sbjct: 408 LEMGNQLGLRDKNKFVCLWVVDFPMFEWSDEEGRLMAMHHPFTHPKDEDIPLLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+VCNG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAQEQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL L +    
Sbjct: 528 GLAYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSVIDQKQLDELNLIVEVKE 585


>gi|225021326|ref|ZP_03710518.1| hypothetical protein CORMATOL_01345 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945708|gb|EEG26917.1| hypothetical protein CORMATOL_01345 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 593

 Score =  601 bits (1549), Expect = e-169,   Method: Composition-based stats.
 Identities = 245/606 (40%), Positives = 339/606 (55%), Gaps = 29/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  GDL     G  V L+GWV R R HGG+IF+D+RD  GI QVV   D A  E A  
Sbjct: 3   RTHLAGDLRKETAGQTVTLTGWVARRRDHGGVIFIDLRDSSGIAQVVF-RDPAVAETAHH 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG---EREYP 121
           +RSE+ + + G+V +R A + N N+ +G IE++  ++++L+ A  LP  +       E  
Sbjct: 62  LRSEFCIKVTGVVEARPAGSENPNLASGDIEVNVTELDVLNEAAALPFQIDDTAKGGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR      +  R+    + R  +   +F+E  TP LT S+PEGARDF+
Sbjct: 122 EETRLKYRYLDLRRPAQGGALRLRSEANKAARRVLEKHDFVEIETPTLTRSTPEGARDFV 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLLM +G +RY+Q+A C+RDED R+DR P EF QLDMEM
Sbjct: 182 VPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQLARCYRDEDFRADRQP-EFMQLDMEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+DI+  +E +L  +++      T+     R+ Y +A+R YG+DKPDLR  I +  
Sbjct: 241 SFVDQEDIIAIVEEILVALWQLIG--YTIPTPIPRMTYAEAMRDYGSDKPDLRFDIKLVE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE F ++ FRVF         Y    + A G    R   D   EWA+ +G  GLAYI  
Sbjct: 299 CTEFFSNTPFRVFQN------EYVGAVVMAGGASQPRRQLDAWQEWAKQRGAKGLAYIL- 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G  +  GPVAK+L+      I   +  Q GD  FF AG+     +    AR  IA
Sbjct: 352 -IGEDGEAS--GPVAKNLSDAERNGIAAHVGAQPGDCIFFAAGETKASRALLGAARGEIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGMESLKG 471
           ++LG+I    + F W++D P +E + E K               H+ FT P         
Sbjct: 409 RKLGLIKEGDWAFTWVVDAPMFEPSAEAKASGDVALGHSAWTAVHHAFTAPTDECLDTFD 468

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D  S  +  YD+VCNG EI  G IR H  +V  + F  +GI+KE  + +FG L  AF  
Sbjct: 469 TDPGSALSNAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITKEEAQEKFGFLLDAFAF 528

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G DRIV LL G  ++R+V  FP S    D L  +P+ +S +Q +E G+  
Sbjct: 529 GAPPHGGVALGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPISAQQRKETGVDF 588

Query: 592 VENPKK 597
              PKK
Sbjct: 589 --KPKK 592


>gi|314923566|gb|EFS87397.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
          Length = 606

 Score =  600 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 229/603 (37%), Positives = 329/603 (54%), Gaps = 25/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R H  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RPHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++       +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKIIG--VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF         Y    +   G    R   D   EWAR++G  GLAYI     
Sbjct: 300 FFANTAFRVFQAP------YVGAVVMPGGASLPRRQFDAWQEWARTRGAKGLAYITI--- 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            S   A  GPVAK+++      I  +   + GD+ FF AG           AR  I +  
Sbjct: 351 -SDEGAPEGPVAKNISEEEKAGIAEKAGAKPGDAIFFAAGSKTSCQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDL 474
            + + + + FCW++D P ++  +E                 H+ FT P          D 
Sbjct: 410 ELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD V NG E+  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ ++  Q RE G  +   
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAG--VDAK 587

Query: 595 PKK 597
           PKK
Sbjct: 588 PKK 590


>gi|147669288|ref|YP_001214106.1| aspartyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|189082095|sp|A5FRE3|SYD_DEHSB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146270236|gb|ABQ17228.1| aspartyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 598

 Score =  600 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 244/600 (40%), Positives = 358/600 (59%), Gaps = 12/600 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           +THSC  L   +VG+ V L+GWVHR R HGG+IF+D+RD  GI QVV NP+ +  C +I 
Sbjct: 3   KTHSCA-LTQENVGTEVTLAGWVHRRRDHGGVIFIDLRDREGIVQVVFNPEQSAACLDIG 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +RSE+VL + G+V  R A T N  + +G +E+ A   +IL+ A+  P  +  E E  E
Sbjct: 62  KELRSEYVLQVKGVVSHRPAGTENNRMPSGMVEVVAVHAKILNAAKTPPFYINEEVEVDE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LD+RR  +  N++ R + +  MR  +  + FIE  TPIL  S+PEGARD+LV
Sbjct: 122 SLRLKYRYLDIRRQGMKNNLIIRHKAVRFMREFLNDQGFIEIETPILIKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G F+ALPQ+PQQ KQLLM +G ++Y+Q+A CFRDED R+DR P EF QLDMEMS
Sbjct: 182 PSRLFPGKFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQP-EFTQLDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++D++  ME++  G+          +  F RI + DA  +YG DKPDLR  + + ++
Sbjct: 241 FVDEEDMMKLMEDLFTGLVANVRPDMKYNKKFPRISFADATEKYGCDKPDLRFGMELADI 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+    S F VF  + +     +  + P  GG  N++  + +   A+  G  GL  I   
Sbjct: 301 TDIGASSAFGVFKNVAAQGGAIKAISAPGCGG-YNKSQQEELINLAKKYGAAGLVPISLG 359

Query: 363 LDESGNVAGM------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           + E+G +  +         AK+L +   + I  R   + GD    +AG      +   + 
Sbjct: 360 V-ENGELKDLTMEMVKSVAAKYLALEEIKTIAERSGAKPGDLILIVAGARKMVNTVLGEM 418

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           RN +A +L + + N   F +++DFP ++W+EE K+ D  H+PFT P      L   D   
Sbjct: 419 RNQLAVKLNLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLESDMPLMDTDPGR 478

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + +  YD+VCNG+EIA G IR H +++  + F  +G + E ++ RFG L  AF+ G PPH
Sbjct: 479 VGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFHLLGYNDEQIDERFGHLLEAFEFGAPPH 538

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A GIDR VMLL G  ++REV  FP +Q   DLL G+PS V  +Q+R+L +RI    +
Sbjct: 539 GGVAPGIDRFVMLLAGETSIREVISFPKNQAAQDLLFGAPSVVDDKQIRDLHIRIQAEKE 598


>gi|323345167|ref|ZP_08085391.1| aspartate--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323094437|gb|EFZ37014.1| aspartate--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 589

 Score =  600 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 215/602 (35%), Positives = 340/602 (56%), Gaps = 19/602 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT++CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   +    +
Sbjct: 1   MYRTNTCGELRLSDAGKQVTLAGWVQRTRKMGGMTFVDLRDRYGITQLVFNEADNRELCD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + + G V  R ++  NA + TG +E+   +  +LS +   P  +  + + 
Sbjct: 61  NANKLGREYCIQVRGTVSERQSK--NAKMETGDVEILVTEFVVLSESATPPFKIEDDTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + KN+  R R+   +R  + +  FIE  TP+L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRPAVRKNLELRHRMTILIRNFLDSHRFIEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D+++  E++ R +F+E    N       ++ + DA++R+G+DKPD+R  +   
Sbjct: 238 MSFVDQEDVISLFEDMARHLFKEIRGVNLPDKL-QQMTWYDAMKRFGSDKPDIRFGMEFV 296

Query: 301 NVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + +    S EF VF+    +            G   +R   + + ++ +    G  GL 
Sbjct: 297 EMMDILKGSGEFSVFNNAEYIGG-----ICVPGGADYSRKQLNELTDFVKRPQIGAQGLV 351

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           ++ +  D        G + K       E+++ +   +DGD    + GD   K  +     
Sbjct: 352 FVKYNTDG----TVKGSIDKFYTPAVLESLKEKTGAKDGDLVLILCGDNANKVRTQLCAL 407

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  + + L + + N FE  WI+DFP +EW++EE+++   H+PFTMP      L       
Sbjct: 408 RLEMGERLRLRDKNKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLEEHPER 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G +R H  ++  + F  +G + E    +FG L  AF+ G PPH
Sbjct: 468 VRAKAYDFVCNGIEVGGGSLRIHDGKLQEKMFKILGFTPERAMAQFGFLINAFKYGAPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+A G+DR V ++ G  ++R+   FP + +  D+++ +PS +  +QL EL +++  + +
Sbjct: 528 AGLAFGLDRFVAIMAGLDSIRDCIAFPKNNSGRDVMLDAPSEIDDKQLDELQIKVDLHQE 587

Query: 597 KI 598
           K 
Sbjct: 588 KA 589


>gi|305681447|ref|ZP_07404254.1| aspartate--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659652|gb|EFM49152.1| aspartate--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 593

 Score =  600 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 244/606 (40%), Positives = 339/606 (55%), Gaps = 29/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  GDL     G  V L+GWV R R HGG+IF+D+RD  GI QVV   D A  E A  
Sbjct: 3   RTHLAGDLRKETAGQTVTLTGWVARRRDHGGVIFIDLRDSSGIAQVVF-RDPAVAETAHH 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG---EREYP 121
           +RSE+ + + G+V +R A + N N+ +G IE++  ++++L+ A  LP  +       E  
Sbjct: 62  LRSEFCIKVTGVVEARPAGSENPNLASGDIEVNVTELDVLNEAAALPFQIDDTAKGGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR      +  R+    + R  +   +F+E  TP LT S+PEGARDF+
Sbjct: 122 EETRLKYRYLDLRRPAQGGALRLRSEANKAARRVLEKHDFVEIETPTLTRSTPEGARDFV 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLLM +G +RY+Q+A C+RDED R+DR P EF QLDMEM
Sbjct: 182 VPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQLARCYRDEDFRADRQP-EFMQLDMEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+DI+  +E +L  +++      T+     R+ Y +A+R YG+DKPDLR  I +  
Sbjct: 241 SFVDQEDIIAIVEEILVALWQLIG--YTIPTPIPRMTYAEAMRDYGSDKPDLRFDIKLVE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE F ++ FRVF         Y    + A G    R   D   EWA+ +G  GLAYI  
Sbjct: 299 CTEFFSNTPFRVFQN------EYVGAVVMAGGASQPRRQLDAWQEWAKQRGAKGLAYIL- 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G  +  GPVAK+L+      I   +  Q GD  FF AG+     +    AR  IA
Sbjct: 352 -IGEDGEAS--GPVAKNLSDAERNGIAAHVGAQPGDCIFFAAGETKASRALLGAARGEIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGMESLKG 471
           ++LG+I    + F W++D P +E + E K               H+ FT P         
Sbjct: 409 RKLGLIKEGDWAFTWVVDAPMFEPSAEAKASGDVALGHSAWTAVHHAFTAPTDECLDTFD 468

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D  S  +  YD+VCNG EI  G IR H  +V  + F  +GI++E  + +FG L  AF  
Sbjct: 469 TDPGSALSNAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAQEKFGFLLDAFAF 528

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G DRIV LL G  ++R+V  FP S    D L  +P+ +S +Q +E G+  
Sbjct: 529 GAPPHGGVALGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPISAQQRKETGVDF 588

Query: 592 VENPKK 597
              PKK
Sbjct: 589 --KPKK 592


>gi|329954874|ref|ZP_08295891.1| aspartate--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328526978|gb|EGF53989.1| aspartate--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 585

 Score =  600 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 226/598 (37%), Positives = 336/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            YR+H+CG+L +SDV   V L+GWV R R  GG+ F+D+RD YGITQ+V N +      E
Sbjct: 1   MYRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEVDAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ I G V  R ++  N NI TG IE+   ++ +L+ A   P  +    + 
Sbjct: 61  QANRLGREFVIQIVGTVNERFSK--NKNIPTGDIEIIVSELNVLNSALTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  + KN+  R ++   +R  + ++ FIE  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRAAVRKNLELRHKMTIEVRKYLDSKGFIEVETPLLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++   E + + +F+E      ++  F R+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVQQDDVIELFEGMAKYLFKEIRGVE-LTEPFQRMPWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     +                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDIMKGHGFSVFDNAAYIGG-----ICAEGAASYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  G V     V K       + ++     + GD    ++GD + K      + R
Sbjct: 352 A--RIEADGTVK--SSVDKFYTQEVLQDMKAAFGAKPGDLILILSGDDVMKTRKQLNELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   WI+DFP +EW+EEE ++   H+PFT P+     L   D  ++
Sbjct: 408 LEMGNQLGLRDKNKFALLWIVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+VCNG E+  G IR H +++  + F  +G + E  E +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAEEQFGFLMNAFKFGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL L +    
Sbjct: 528 GLAYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSVIDQKQLDELNLIVEVKE 585


>gi|315651809|ref|ZP_07904813.1| aspartate--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485939|gb|EFU76317.1| aspartate--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 594

 Score =  600 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 227/594 (38%), Positives = 344/594 (57%), Gaps = 11/594 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
            R+H C ++  + + S V + GWV + R  GGIIF D+RD  GI Q++   D      F 
Sbjct: 9   KRSHRCAEVVNAPLESEVTVMGWVQKNRNKGGIIFCDLRDRSGILQIIFEEDECGSEVFN 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  ++ E+ + + G++  RS    N ++ TG++E+ A  + ILS +E  P  +  + + 
Sbjct: 69  KAMKLKQEFCIAVTGILKKRSG-AFNESLKTGELEVRAMGLRILSESETPPFHIEEDSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR  L +N++ R+++  + R  +    F+E  TP L  SSPEGARD+
Sbjct: 128 KEELRLKYRFLDLRRPDLQRNLMVRSKVATTTRNFLAENGFLEIETPTLIKSSPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  GSFYALPQ+PQ +KQLLM SG+DRYFQ+A C+RDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVYPGSFYALPQSPQLFKQLLMVSGYDRYFQLARCYRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+L+  E +L+ +F++  + +       R+ + +A+ R+G+DKPDLR  + + 
Sbjct: 247 LSFVDVDDVLDVNERLLQRLFKDVLDIDI-KLPIQRMTWQEAMDRFGSDKPDLRFGMELK 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++    SEF VF   L+           +   G  R   D + E+ +S    GLAY+ 
Sbjct: 306 DVSDIVKDSEFAVFKNALANGGSVRGINA-SGQAGMPRKKIDALVEFVKSYKAKGLAYMA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D     +     AK +     E +R  LD + GD  FF A             R  +
Sbjct: 365 VEADG----SIKSSFAKFMKEEEIEGLRKALDAKPGDMLFFAADSNKIVWDTLGALRVEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A +LG++  + + F W+  FP  EW++EE +    H+PFT P         +D   ++A 
Sbjct: 421 ANQLGLLKKDDYRFLWVTQFPLLEWSDEENRFKAMHHPFTAPMDEDWQYIDSDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H +++  + F  +G+SKEV + RFG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTEIGGGSVRIHQADIQSKMFDVLGLSKEVADERFGYLLEAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+VML++GA ++R+V  FP  ++  DL+  +P  V   QL+ELG++I EN
Sbjct: 541 YGLDRVVMLMVGADSIRDVIAFPKVKDASDLMTNAPDKVDDAQLKELGIKIEEN 594


>gi|299144029|ref|ZP_07037109.1| aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518514|gb|EFI42253.1| aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 591

 Score =  600 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 223/592 (37%), Positives = 341/592 (57%), Gaps = 11/592 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEI 61
            RT+ CG+L  S++G  + L GW+ + R  G IIF D+RD  GI Q+V +   D   FE 
Sbjct: 9   KRTYYCGELRESNIGQEITLMGWIAKERNLGSIIFADLRDRTGIVQIVFDDTVDKNLFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +RSE+V+ + G V  RS  +IN  I TG+IEL A ++ IL+ +E  P+ +  +    
Sbjct: 69  AVKLRSEFVVAVIGKVRERS--SINDKIPTGKIELIASELRILNESEVPPIYIKDDDNVA 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R K R LDLR+  + KN++ R+++    R     E F+E  TP+LT  +PEGARD+L
Sbjct: 127 ENTRLKNRALDLRKPYMQKNLMTRSKLYKITRDFYYNEGFMEIETPMLTKPTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ  KQLLM SGFDRY QI  CFRDED R++R P EF Q+D+EM
Sbjct: 187 VPSRVNPGKFYALPQSPQLMKQLLMVSGFDRYMQITKCFRDEDLRANRQP-EFTQIDLEM 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE DD+++  E  L+  F+E  N +      +R+ Y +A+ R+G DKPDLR  + + N
Sbjct: 246 SFVEVDDVIDINERFLKYAFKEMLNIDI-ELPLMRMKYAEAMDRFGVDKPDLRFGLELVN 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E      F+VF              I       +R    ++ ++ ++ G  GLA+I  
Sbjct: 305 ISELVKECGFKVFESCTDEGKSVRGINIKNGAEFYSRKAIGKLEDFVKTYGAKGLAWIKV 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             +         P++K L+      I  +L  + GD   F+A           + RN +A
Sbjct: 365 EEN-----GINSPISKFLSEDVVNDIMNKLKAEIGDLLVFVADKNNIVFDSLGNLRNSVA 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +++ +I+ + F+  WI +FP +E++E+E++    H+PFT P     +L        +A  
Sbjct: 420 KDMNLIDKDDFKLLWITEFPLFEYDEDEQRYVAKHHPFTSPMDEDLNLIETAPHLARAKA 479

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR +  ++  + F  +G ++E  E++FG L  AF+ G PPHGG+A 
Sbjct: 480 YDIVINGDEMGGGSIRINNPQIQSKMFKALGFTEEEAEDKFGFLLEAFKYGAPPHGGLAY 539

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G+DR+VM    + N+R+V  FP +Q+   LL G+P+ +S  QL E+ ++++E
Sbjct: 540 GLDRLVMTFTKSDNIRDVIAFPKTQSATCLLTGAPTELSDLQLNEVHIKVIE 591


>gi|118586991|ref|ZP_01544423.1| aspartyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|118432613|gb|EAV39347.1| aspartyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
          Length = 591

 Score =  600 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 227/595 (38%), Positives = 339/595 (56%), Gaps = 11/595 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           + RT   G +     G  + L GWV + R  GG+IF+D+RD  GI Q+  + +      +
Sbjct: 4   KQRTVYAGLVNEKMAGQTITLKGWVQKRRDLGGLIFVDLRDREGIVQLTFSDEFSKDALK 63

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ I G+V  R+   IN  + TG+IE+   + EIL+ ++  P  +    + 
Sbjct: 64  TAERIRSEYVISITGVVSLRAESAINPKMKTGKIEVLVHQAEILAESKTPPFDIEDGVDV 123

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E ++ KYR+LDLRR  + K ++ R++I++S    M    F++  TP L  S+PEGARD+
Sbjct: 124 NEELKLKYRYLDLRRPEMQKGLILRSKIMSSSMRFMEENGFLDIETPYLAKSTPEGARDY 183

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+  GSFYALPQ+PQ +KQLLM +GFDRYFQIA CFRDED R DR P EF QLDME
Sbjct: 184 LVPSRIYPGSFYALPQSPQLFKQLLMGAGFDRYFQIARCFRDEDLRGDRQP-EFTQLDME 242

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ Q +I+  +   +  +  + +  N  SN+F  + + +A+ R+G+DKPDLR  I +H
Sbjct: 243 TSFMNQGEIMELVNRWITQIMSDVAKANIDSNSFPVLHWQEAMDRFGSDKPDLRFGIELH 302

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E    + F VF+  +      +    P       R   D   ++ +  G  GLA+I 
Sbjct: 303 DVSEIMKQTNFTVFTGAIKKGGFVKAIVAPKGATKFTRKMIDGQTDYIKRFGAKGLAWIK 362

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E+G  +  GP+AK ++      +   L + DGD  FF A             R ++
Sbjct: 363 F---ENGEFS--GPIAKFVSD-VKGQLVSFLSLSDGDLVFFAADTFSVVSDTLGYLRKYV 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+EL +IN + ++F WI+D+P +E++E+  +   AH+PFTMP            D     
Sbjct: 417 AKELDLINESKWDFAWIVDWPLFEYSEDFGRWIAAHHPFTMPNEEDLHYLDDGEDPHLAH 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+ SG IR H  ++  +    +G + +  E  FG L  A + G PP GG
Sbjct: 477 AQSYDLVLNGYELGSGSIRIHTMDIQKKMLKALGFTSDQAEKAFGFLLEAMEYGFPPMGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           IA G+DR+ MLL G +N+REV  FP + N  + +  +PS VS +QL ELGLR+ E
Sbjct: 537 IALGLDRLAMLLSGKENIREVIAFPKNSNATEPMTQAPSRVSEKQLTELGLRVPE 591


>gi|288800043|ref|ZP_06405502.1| aspartate--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288333291|gb|EFC71770.1| aspartate--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 588

 Score =  600 bits (1547), Expect = e-169,   Method: Composition-based stats.
 Identities = 225/601 (37%), Positives = 344/601 (57%), Gaps = 19/601 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            YRT+SCG+L + D G  V L+GWV RVR  GG+ F+D+RD YGITQ+V N  S+    E
Sbjct: 1   MYRTNSCGELRLKDAGKEVTLAGWVQRVRKMGGMTFVDLRDRYGITQLVFNESSSKELTE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + I G V  R ++  N NI TG+IE+    + ILS +   P  +    + 
Sbjct: 61  KANKLGREFCIQIVGEVSERQSK--NNNIPTGEIEILVSTLNILSESVTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR+T+ KN+  R ++   +R  +    FIE  TP+L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRNTVRKNLELRHKMTILIRNFLDNLQFIEVETPLLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D+L   E++ R +F+E  N    +    ++ + +A+ +YG+DKPDLR  +   
Sbjct: 238 MSFVDQEDVLEVFESMTRHLFKEVLNVELPAKL-RQMTWHEAMSKYGSDKPDLRFGMEFV 296

Query: 301 NVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + +    + EF +F+    +                +R   + + ++ +    G  GL 
Sbjct: 297 ELHDLLKGTGEFSIFNNAEYIGG-----ICATGCSSYSRKQINELTDFVKRPQVGASGL- 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADA 416
            I+ +++E G++     + K  +    E +  R+D + GD    + G  P K  +     
Sbjct: 351 -IWLKIEEDGSIK--SSIDKFYSADILEQLCERMDAKKGDLVLIMCGEKPNKTRTQLCAL 407

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +A+ LG+ + N +E  WI+DFP +EW++EE+++   H+PFT+P      L       
Sbjct: 408 RLEMAERLGLRDKNKYECLWIVDFPLFEWSDEEQRLMATHHPFTLPNPDDIPLLDEHPEQ 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G +R H   +  + F  +G SKE    +FG L  AF+ G PPH
Sbjct: 468 VRAKAYDFVCNGIEVGGGSMRIHDGALQEKMFQILGFSKEEALAQFGFLINAFKYGAPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIA G+DR V +     ++R+   FP + +  D+++ +PS ++ +QL EL +++    +
Sbjct: 528 AGIAFGLDRFVSIFAQLDSIRDCIAFPKNNSGRDVMLDAPSALADKQLTELQIKVDVRQE 587

Query: 597 K 597
           K
Sbjct: 588 K 588


>gi|315187478|gb|EFU21234.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 597

 Score =  600 bits (1547), Expect = e-169,   Method: Composition-based stats.
 Identities = 243/595 (40%), Positives = 349/595 (58%), Gaps = 11/595 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EI 61
            RT +CG L  +D G  V L+GWVHR R HGGI F+++RD YGITQVV + +S      +
Sbjct: 11  KRTTTCGALRATDAGKEVILNGWVHRKRDHGGIHFINLRDRYGITQVVVDEESPEEVRRL 70

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            ++++ E+ + + G+V  R     N  + TG IE+ A  I  LS +E LP P+    +  
Sbjct: 71  VEALKYEYCIAVKGVVRLRPETMRNPQMPTGDIEVLATGIRPLSASEPLPFPIDDAIDAR 130

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +YR+LDLRR  + +N+  R  +    R  ++ + F E  TP    S+PEGARDFL
Sbjct: 131 EELRLQYRYLDLRRPRMQRNLTLRHLVAWHAREYLVGKGFYEIETPTFIRSTPEGARDFL 190

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R++ G FYALPQ+PQ +KQLLM +GFD+YFQIA C+RDED R DR P EF Q+DMEM
Sbjct: 191 VPARLHPGRFYALPQSPQLFKQLLMVAGFDKYFQIARCYRDEDARGDRQP-EFTQIDMEM 249

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV QDD+L   E ++  +F++    + +S  F R+ Y++A+ RYGTDKPDLR  + + +
Sbjct: 250 SFVTQDDVLAETEGLMAHIFQKALGVD-LSLPFPRLTYEEALDRYGTDKPDLRYGLELKD 308

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            T H     F+ F K+++     +   +   G   +R   + + E A++    GLA++  
Sbjct: 309 FTLHVDKGSFQAFQKVVAQGGVVK-ALVVEGGASFSRKEIEALEEVAKTYRAAGLAWM-- 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++ E G   G+G   K        A+   L  + GD    +       C+     R  +A
Sbjct: 366 KVTEGGLEGGVG---KFY-QEAAPALITSLGARPGDLILLVGDTWKTACTALGAVRTAVA 421

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +  G+I    F FCW++DFP +EWNEEE+K D AH+ FTMP+     L   D  ++KA  
Sbjct: 422 RTRGLIPEGAFSFCWVVDFPMFEWNEEERKWDPAHHMFTMPREEHLPLLEKDPGAVKAAA 481

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLVCNG+E+ASG +R H  E+  + F  VG S+    +RFG L  AF+ G PPHGGIA 
Sbjct: 482 YDLVCNGYELASGSLRIHDPELQRRIFKVVGFSEAEAASRFGFLTTAFKYGPPPHGGIAP 541

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VM++ G + +REV  FP +      L GSP+ V   QL EL LR+V   +
Sbjct: 542 GLDRLVMIMAGEETIREVIAFPKTAAGLSPLDGSPAEVDPAQLEELHLRVVLPEE 596


>gi|32475271|ref|NP_868265.1| aspartyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|46577189|sp|Q7UFY6|SYD_RHOBA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|32445812|emb|CAD78543.1| Aspartyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 592

 Score =  600 bits (1547), Expect = e-169,   Method: Composition-based stats.
 Identities = 235/593 (39%), Positives = 334/593 (56%), Gaps = 10/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RTH+CG L  SDVGS V L GWV   R HGG +F+D+RD YG+TQVV  P  A   + K 
Sbjct: 3   RTHTCGALRKSDVGSPVTLCGWVDSKRDHGGAVFIDLRDRYGLTQVVIGPPEANEALIKQ 62

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
              V +E V+ I G+V  R     NA + TG+IE+ ++  EILS +E  P          
Sbjct: 63  AGHVPNESVILIRGVVADRLEGKTNAKLETGEIEVRSEHFEILSASETPPFTPGQSDLPG 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYRFLDLRR  + + +++R+ II  MR      +FI+  TPIL  S+PEGARD+L
Sbjct: 123 EDLRLKYRFLDLRRKEMQQALIRRSEIIKCMRDYFAEHDFIDVETPILGRSTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+  +FYALPQ+PQ YKQ+LM +GFDRY Q+A CFRDED R+DR P EF QLD+EM
Sbjct: 183 VPSRVHPSNFYALPQSPQLYKQILMVAGFDRYVQVAKCFRDEDLRADRQP-EFTQLDLEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ +DI+  ++ ++    ++    +  +    R+ Y++A+RR+G+D PDLR  + + +
Sbjct: 242 SFVDSEDIIGLIDGLVAKTAKQVLGKDI-TLPLPRMTYEEAMRRFGSDAPDLRFGLEIVD 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQPGLAYIF 360
           VT     ++FRVF              +       +R   D +  + +   G  GLA+  
Sbjct: 301 VTSVAAKTDFRVFRGTADAGNFVRGINVKDSALKFSRRQIDELTAFVQQDFGAKGLAW-- 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +R+++ G +    P+AK+ +  +   I+  +  + GD   F+A      C   +  R  +
Sbjct: 359 FRVEDDGTLW--SPIAKNFDEEHLAEIKALMGGEPGDLLMFLADTWEVTCKGLSGLRKRL 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +         W+ +FP +E +EE  +    H+PFT P      L        +A 
Sbjct: 417 AVELKLYEDGELNCSWVTEFPMFEKDEEAGRYVAMHHPFTAPLEEDLPLLKESPEKCRAQ 476

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E   G IR H S+V  Q F  +G+ +E   +RFG L  A + G PPHGGIA
Sbjct: 477 AYDLVINGSEAGGGTIRIHDSKVQSQVFELLGMDEETARDRFGFLLDALRFGAPPHGGIA 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR VML  G +N+REV  FP +Q   D++ G+P  V  +QL EL LR V 
Sbjct: 537 LGVDRWVMLFAGLENIREVIAFPKTQKAADMMTGAPGEVDADQLNELHLRTVS 589


>gi|227495473|ref|ZP_03925789.1| aspartate--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831020|gb|EEH63403.1| aspartate--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 594

 Score =  600 bits (1547), Expect = e-169,   Method: Composition-based stats.
 Identities = 232/603 (38%), Positives = 338/603 (56%), Gaps = 28/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  S  G  V ++GWV R R HGG++F+D+RD  GI QVV   ++    +A  
Sbjct: 8   RTHEIGSLNASLEGETVTVAGWVDRRRDHGGVVFVDLRDASGIAQVVVRDEA----VAHK 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----REY 120
           +RSE+VL + G V  R     N ++ TG+IEL    IEIL+  + LP  +        + 
Sbjct: 64  LRSEFVLKVTGEVARRPEGNENTSLSTGEIELLGDHIEILNTCDALPFQISDNADDSGKV 123

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR+LDLRR      I  R+++  + R  +    F+E  TP LT S+PEGARDF
Sbjct: 124 GEETRLRYRYLDLRRSPAQYAIRLRSKVSQAARKVLDQHKFVEIETPTLTRSTPEGARDF 183

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 184 LVPARLSPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIE 242

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD++   E+VL+ V+        +     R+ + DA+ +YG+DKPDLR  + + 
Sbjct: 243 MSFVEQDDVIGVAEDVLKEVWGTIG--YDLPTPIPRMTFKDAMEKYGSDKPDLRFGLEIV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++TE+F ++ FRVF         Y    +   GG   R   D+  EWA+S+G  GLAY+ 
Sbjct: 301 DLTEYFKNTPFRVFQS------DYVGAVVMPGGGSQARRTFDKWQEWAKSRGAKGLAYVT 354

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +   GPVAK+++      ++      +GD  FF AG   +  +     R  I
Sbjct: 355 --ISEDGELG--GPVAKNISAEERAGLQAATGAANGDCVFFGAGKADEARALLGATRLEI 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMPQGGMESLKGND 473
            +  G+I+ + + F W++D P ++ + ++        K    H+ FT P          +
Sbjct: 411 GKRTGLIDEDAWSFVWVVDAPLFKPSGQDDDVDLGNSKWTAVHHAFTSPNPDWIDNFEEN 470

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                A+ YD+VCNG EI  G IR H  +V  + F+ +GI  E  + +FG L  AF+ G 
Sbjct: 471 PGEALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGA 530

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G DRIV LL  + ++R+V  FP S    D L  +P+ ++ EQ  E G+  V 
Sbjct: 531 PPHGGIAFGWDRIVSLLTKSDSIRDVIAFPKSGGGFDPLTQAPAPITPEQRAEAGVDYVA 590

Query: 594 NPK 596
             +
Sbjct: 591 EDE 593


>gi|228477954|ref|ZP_04062565.1| aspartyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250134|gb|EEK09387.1| aspartyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 583

 Score =  600 bits (1547), Expect = e-169,   Method: Composition-based stats.
 Identities = 225/590 (38%), Positives = 343/590 (58%), Gaps = 17/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP   D+   E 
Sbjct: 3   RSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENADANVVET 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N N+ TG +EL  + +++L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGTVEAR--EQANDNLPTGAVELKVEDLKVLNTAKTTPFEIKDGVEAS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +++R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHAIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLNEQEIQDITEGLIAKVMKETKGIE-VTLPFPRMSYDDAMNNYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VF++     P  +   +       +R   D++ E+A+  G  GLA++  
Sbjct: 299 LTEVVKGVDFKVFAEA----PAVKAIVVKGNADKYSRKSIDKLTEFAKQFGAKGLAWVKM 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                      GPVAK L  +  + +   L +++ D   F+A       +     RN IA
Sbjct: 355 TDGA-----LAGPVAKFLTSIE-DKLTDALHLEENDLVLFVADTLEIANNTLGALRNQIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL +I+   F F W++D+P +EW+EEE +   AH+PFT+P     +    DL  ++A  
Sbjct: 409 KELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDLSKVRAVA 468

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  ++  +    +G S+E    +FG L  A   G PPHGG+A 
Sbjct: 469 YDIVLNGYELGGGSLRINHKDLQERMLKALGFSEESAYEQFGFLLEAMDYGFPPHGGLAI 528

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL L +
Sbjct: 529 GLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHV 578


>gi|29830938|ref|NP_825572.1| aspartyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|46577226|sp|Q82F68|SYD_STRAW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|29608051|dbj|BAC72107.1| putative aspartyl-tRNA synthetase [Streptomyces avermitilis
           MA-4680]
          Length = 587

 Score =  600 bits (1547), Expect = e-169,   Method: Composition-based stats.
 Identities = 292/597 (48%), Positives = 399/597 (66%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVGS VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRASDVGSDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               V  E  + +DG V+SR  E +N ++ TG+IE+   ++E+L  A  LP  +  E   
Sbjct: 61  ALDKVSKESTVRVDGKVVSRGTENVNPDLPTGEIEVEVSEVELLGAAAPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+++R +M A  F E +TPIL+A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNILLRTAVISAIRHKMTALGFNEMATPILSATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLHPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF  G  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F  SEF+ F+        +          G  R F D + ++A  QG  GLA++ 
Sbjct: 301 DITDIFEGSEFKAFA------GKHVRALPVPDVSGQTRKFFDGLGDYAVEQGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G++   GP+AK L   N   +  RL +  G + FF AG+  +        R   
Sbjct: 354 -RVGEDGSLT--GPIAKFLTEENVAELTKRLSLAPGHAVFFGAGEFDEVSKIMGAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G    N F FCWI+DFP YE +E+  KIDF+HNPF+MPQGG+E+L+  D L I  +
Sbjct: 411 AKRSGNFEENVFRFCWIVDFPMYEKDEDTGKIDFSHNPFSMPQGGLEALETQDPLDILGW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  E+ML+AF   G  ++ VE +F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGVELSSGAIRNHEPEIMLKAFEIAGYDRDTVEEQFAGMLRAFRFGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL L + +   K
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELHLSVRKPQPK 587


>gi|108804189|ref|YP_644126.1| aspartyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|123368172|sp|Q1AWB4|SYD_RUBXD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|108765432|gb|ABG04314.1| aspartyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 600

 Score =  600 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 254/597 (42%), Positives = 356/597 (59%), Gaps = 8/597 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFE 60
           + YRTH+ G+L  S+VG  VRL+GWVHR R HGG+IF+D+RD +GITQV  +P+    F 
Sbjct: 7   NPYRTHTAGELRASNVGQRVRLAGWVHRRRDHGGLIFVDLRDRWGITQVTFDPERGEVFS 66

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R EW + ++G V+ R     N  + TG+IE+ A  + +L+ +E  P  +  ER  
Sbjct: 67  AAERLRPEWSVSVEGEVVRRPEGNENPELPTGEIEVEASSLRVLNASETPPFEIDRERPV 126

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR+LDLRR+ + +NI+ R R++  +R  +   +F+E  TP+LT S+PEGARD+
Sbjct: 127 DELTRLRYRYLDLRRERMRENILFRDRVVRYIRRYLAERDFVEVETPLLTKSTPEGARDY 186

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+  G FYALPQ+PQQ+KQLLM +G +RYFQIA   RDED R DR P E  QLD+E
Sbjct: 187 LVPSRLYPGQFYALPQSPQQFKQLLMVAGLERYFQIARALRDEDQRGDRQP-EHTQLDLE 245

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MS+  QD++L  +E +   + E  +    +   F R+ Y +A+ R+G+DKPDLR  + + 
Sbjct: 246 MSYTTQDEVLQLIEGLYTEIVERLTEKRVLFKPFPRLTYAEAMERFGSDKPDLRFGLELR 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++    SEF+VF   +         A    G   +R   D + E AR  G  GLA++ 
Sbjct: 306 DVSDLARSSEFKVFRNAVEAGGSVRGLAAGGLGD-LSRRELDGLTEVAREGGARGLAHLR 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                       GPVAK  +     A+R  L  + GD  FF+A             R H+
Sbjct: 365 AEGKA-----LKGPVAKFFSAEEQAALREALGARPGDWMFFVADRDPVVFESLNRLRLHL 419

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
              LG+ + +   FCWI DFP +E+NEEE +I+  H+ FTMP+     L   D L++   
Sbjct: 420 RDRLGLADRDALAFCWITDFPLFEYNEEEGRIEPMHHMFTMPREEDIPLLDTDPLAVTGQ 479

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+ASG IR H  ++  + FS +GI +E  E RFG L RAF+ G PPHGGIA
Sbjct: 480 LYDLVANGVELASGSIRIHRPDLQQKVFSIIGIDEEEAERRFGTLLRAFRYGAPPHGGIA 539

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDR+VMLL    N+REV  FP +Q   D +M +PS VS EQLREL + +   P++
Sbjct: 540 PGIDRLVMLLRDEPNIREVMAFPKTQAARDEMMDAPSPVSEEQLRELHISLCLPPEE 596


>gi|300741587|ref|ZP_07071608.1| aspartate--tRNA ligase [Rothia dentocariosa M567]
 gi|300380772|gb|EFJ77334.1| aspartate--tRNA ligase [Rothia dentocariosa M567]
          Length = 592

 Score =  600 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 222/595 (37%), Positives = 325/595 (54%), Gaps = 27/595 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L  +++G  V L+GWV R R HGG+ F+D+RD  G+TQ V        +  + 
Sbjct: 3   RTHTNGELTAANIGETVTLTGWVARRRDHGGVAFVDLRDRAGVTQCVF----HNEDDFEH 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL + G V  R     N N+ TG+IE+    +E+L+ A  LP  +    E  E  
Sbjct: 59  LRNEYVLRVTGQVTRRPEGNENPNLATGEIEVEVSAVEVLNTAAPLPFQIDEHVEVGEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR    + +  R+    + R  +  + ++E  TP LT S+PEGARDFLVP+
Sbjct: 119 RLRYRYLDLRRPEPARIMRLRSDANRAARNLLADDGYLEVETPTLTRSTPEGARDFLVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLL   G ++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDDI++  E ++  V+        +     R+ Y +A+ +YGTDKPDLR  + +  +T+
Sbjct: 238 DQDDIIDLGERIVEAVWNLI--DVQIPRPIRRMTYTEAMEKYGTDKPDLRFGLELTELTD 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F ++ FRVF         Y    +   G    R   D   EWA+ +G  GLAY+  +  
Sbjct: 296 YFANTTFRVFKAP------YVGAVVMPGGASQPRRTLDAWQEWAKQRGAKGLAYVLVQ-- 347

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK++       +        GD  FF AG+  +  +    AR  I    
Sbjct: 348 EDGELT--GPVAKNITDEERAGLAAATGANPGDCIFFAAGEAKQARALLGAARVEIGHRT 405

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGMESLKGNDL 474
           G+I    + F W++D P +E   E                 H+ FT P+         D 
Sbjct: 406 GLIKDGEWSFLWVVDAPLFESAAEATESGDVALGHSAWTAVHHAFTAPKPEFLDTFDKDP 465

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD+VCNG EI  G IR H  +V  + F+ +GI +E  + +FG L  AF+ G P
Sbjct: 466 GSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFAVMGIGEEEAQEKFGFLLDAFKYGAP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           P GGIA G DRI+ LL G  ++REV  FP + N  D L  +P+ ++ +Q +E G+
Sbjct: 526 PMGGIAFGWDRIISLLAGVDSIREVIAFPKTGNGYDPLTAAPAPITPQQRKEAGV 580


>gi|226323914|ref|ZP_03799432.1| hypothetical protein COPCOM_01691 [Coprococcus comes ATCC 27758]
 gi|225207463|gb|EEG89817.1| hypothetical protein COPCOM_01691 [Coprococcus comes ATCC 27758]
          Length = 597

 Score =  600 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 221/580 (38%), Positives = 333/580 (57%), Gaps = 11/580 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFE 60
            RTH C +L  +++G  V + GWV + R  GG++F+D+RD  G+ QVV      D A  E
Sbjct: 9   KRTHRCAELSEANIGEKVTIMGWVQKNRNKGGLVFVDVRDRSGLIQVVFEEGSTDKALLE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ I G V  RS   +N N+ TG IE+  +++ ILS +E  P P+    + 
Sbjct: 69  KAAKLRSEFVVAIVGTVEKRSG-AVNENLATGAIEIKPEELRILSESETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR  + +N++ R+R+    R  M  E F+E  TP L  S+PEGARD+
Sbjct: 128 KEEVRLKYRFLDLRRPDIQRNLMMRSRVATLARQFMAKEGFLEIETPFLIKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ GSFYALPQ+PQ +KQLLM SG+DRYFQI  CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRIHPGSFYALPQSPQIFKQLLMCSGYDRYFQIVKCFRDEDLRADRQP-EFTQMDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E +L  +F++  + +       R+ + +A+ R+G+DKPD+R  + + 
Sbjct: 247 LSFVDVDDVIDINERLLAHLFKDVLDIDI-QLPIQRMTWQEAMDRFGSDKPDIRFGMELV 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NVTE    SEF VF   +             +GG   R   D++ ++A+  G  GLAYI 
Sbjct: 306 NVTETVKDSEFVVFKNAIEAGGTVRGINAKGQGG-MARKKIDKLVDFAKGYGAKGLAYIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D           +K +    T A+   +  ++GD   F A             R  +
Sbjct: 365 IHEDG----TVKSSFSKFMTEEETAALIKAMAGENGDLLLFAADKNKVVWDVLGALRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++ +++ N ++F WI +FP  EW++E+ +    H+PFTMP         +D   ++A 
Sbjct: 421 ARQMELLDKNEYKFLWITEFPLLEWSDEQNRFTAMHHPFTMPMEEDLQYIDSDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R    E+  + F  +G + E  + +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIFNQEIQSKMFEVLGFTPEQAQEQFGFLLNAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
            G+DR+VML+    ++R+V  FP  ++  DL+  +P  V 
Sbjct: 541 YGLDRLVMLMAKQDSIRDVIAFPKVKDASDLMTEAPERVD 580


>gi|282877970|ref|ZP_06286779.1| aspartate--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299971|gb|EFA92331.1| aspartate--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 586

 Score =  600 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 228/595 (38%), Positives = 340/595 (57%), Gaps = 19/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT++CG+L +SD G  V LSGWV R R  GG+ F+D+RD YGITQ+V N   D++  E
Sbjct: 1   MYRTNTCGELRLSDEGKEVILSGWVQRTRKMGGMTFVDVRDRYGITQLVFNEATDASLCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ +   G V  R ++  N  + TG IE+   ++ +LS +   P  +  E + 
Sbjct: 61  QANKLGREFCIQAIGKVSERQSK--NDKLPTGDIEILVSQLNVLSESLTPPFKIEDETDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR T+ KN+  R R+   +R  +  E FIE  TPIL  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRPTVRKNLELRHRMTILIRNFLDNEQFIEVETPILIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD+++  EN+ R +F+E            ++ + +A+RR+G+DKPDLR  +   
Sbjct: 238 MSFVDQDDVIDLFENLCRHLFKEIRGVELPEKL-QQMTWHEAMRRFGSDKPDLRFGMEFV 296

Query: 301 NVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + + F    +F VF++   +                +R   D ++++ +    G  GL 
Sbjct: 297 ELLDAFKGKADFSVFNEASYIGG-----ICVPGCASYSRKQLDELSDFVKRPQVGAKGLV 351

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           YI +  D          V K  +      ++ R+  +DGD    ++GD   K        
Sbjct: 352 YIKYNADG----TIKSSVDKFYSKEQLLEVKERMGAKDGDLVLILSGDNANKTRVQLCTL 407

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  + + LG+ + N FE  WI+DFP +EW++EE+++   H+PFTMP      L       
Sbjct: 408 RLEMGERLGLRDKNKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPER 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G +R H  ++  + F  +G + E    +FG L  AF+ G PPH
Sbjct: 468 VRAKAYDFVCNGIEVGGGSLRIHDGQLQQKMFEILGFTPEKAMAQFGFLINAFKYGAPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR V ++ G  ++R+   FP + N  D+++ +PST+  +QL EL +++
Sbjct: 528 AGLAFGLDRFVSIMAGLDSIRDCIAFPKNNNGRDVMLDAPSTIDQKQLDELEIKL 582


>gi|84623197|ref|YP_450569.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|97197041|sp|Q2P582|SYD_XANOM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|97197048|sp|Q5H2B1|SYD_XANOR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|84367137|dbj|BAE68295.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 588

 Score =  600 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 224/596 (37%), Positives = 335/596 (56%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + TG++E+ A +I IL+ A    LP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRTGKVEVIATRISILNKAAP--LPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RRYG+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMMRAIFKEVVDVD-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V E    SEF VF+   +   G         G   +R   D     A   G  GLAY
Sbjct: 296 LVDVAELVKSSEFPVFTAAANDADGRVAALRIPGGATLSRKQIDDYAAHAAKYGAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +L E+G V+   P+AK  +     A+   +   +GD  FF AG   K   F    R 
Sbjct: 356 I--KLSETGEVS--SPIAKFFSEEAFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +E  ++    +   W+ DFP +EW+EE ++    H+PFT P     +    +  +  
Sbjct: 412 KAGKEFDLV-AEGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTAV 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGG
Sbjct: 471 SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   
Sbjct: 531 IAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQVRSK 586


>gi|57239393|ref|YP_180529.1| aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579362|ref|YP_197574.1| aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81819221|sp|Q5HAL5|SYD_EHRRW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|57161472|emb|CAH58398.1| aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417988|emb|CAI27192.1| Aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 590

 Score =  600 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 299/596 (50%), Positives = 407/596 (68%), Gaps = 9/596 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACF 59
           M+ YRTH C +L    +   V LSGWV+R R HG IIF+D+RDHYGITQ+V N  D+  F
Sbjct: 1   MNVYRTHLCNELREEHIDQTVTLSGWVYRKRDHGKIIFVDLRDHYGITQLVFNDSDTTIF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           ++  ++R E V+ I G+V +R + TIN  + TG IE+    I I + +E LP+ +   ++
Sbjct: 61  QLITTLRLESVITIKGIVKARDSSTINETLDTGSIEVIVSSINIETASEILPINIASMQD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           Y E IR  YRFLDLRRD +  NI+ R+++I  +R  M    FIE  TPILT+SSPEGARD
Sbjct: 121 YSEDIRLTYRFLDLRRDKVKNNIILRSKVITEIRKSMENMGFIEIQTPILTSSSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR++ G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 YLVPSRIHHGKFYALPQAPQLFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+DI N +E V+  +F +FSN       F +I Y DA+  YG+DKPDLRNP+++
Sbjct: 241 EMSFVTQEDIFNIIEPVMINIFSKFSNKTINKE-FPKISYHDAMLYYGSDKPDLRNPLVI 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  SEF++F+   ++  G  V AIPA     N R+F D   E+A++ G  GL Y
Sbjct: 300 QDVTEIFRDSEFKIFNS--NIKQGMVVRAIPAPNTAHNPRSFFDSKIEFAKTLGAQGLGY 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D        GP+AK L+    + I++  +++ GDS FF++    K   FA + R 
Sbjct: 358 ITFIDDSLAK----GPIAKFLDKDRLDNIKLICNIKAGDSVFFVSEIADKAALFAGEVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL +I  N F+FCW++DFP+++++ +EK I+F HNPF+MPQGG+E+L+  D L+I 
Sbjct: 414 LLGKELNLIEENTFKFCWVIDFPYFKYDHKEKSINFFHNPFSMPQGGLEALENQDPLNIL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG EI+SG IRNH   +M +AFS  G +KE+V+ +F  L RAF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIEISSGAIRNHKLNIMYKAFSIAGYTKEMVDEKFKALTRAFKFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA GIDRIVMLL    N+REV  FP++Q+  DLLMGSPS +  + L+ L L I++ 
Sbjct: 534 IAPGIDRIVMLLADVPNIREVICFPLNQSGEDLLMGSPSEIDNDHLKLLSLNIIKK 589


>gi|167746644|ref|ZP_02418771.1| hypothetical protein ANACAC_01355 [Anaerostipes caccae DSM 14662]
 gi|317471472|ref|ZP_07930824.1| aspartyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|167653604|gb|EDR97733.1| hypothetical protein ANACAC_01355 [Anaerostipes caccae DSM 14662]
 gi|316901087|gb|EFV23049.1| aspartyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 599

 Score =  600 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 227/593 (38%), Positives = 338/593 (56%), Gaps = 11/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEI 61
           R+H C ++G  ++G  V + GWV + R  G +IF+D+RD  G+ Q+V + D+     +E 
Sbjct: 10  RSHRCTEVGRENIGEKVTVMGWVQKRRNLGSLIFVDLRDRSGLLQLVFDEDTLSGEDYEK 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+R+E+V+   G V  RSA  +N N+ TG IE+    + ILS ++  P PV  E+   
Sbjct: 70  ANSLRNEYVIAAAGEVQKRSA-AVNENLKTGDIEIKVTDLRILSESKTPPFPVDAEQTVK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  L KN++ R+++  + R  +  E F+E  TPIL  S+PEGARD+L
Sbjct: 129 DELRLKYRYLDLRRPNLQKNLLVRSQVTKAARDFLAEEGFLEIETPILGKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G+FY LPQ+PQ +KQLLM SG DRY+QIA CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGNFYGLPQSPQLFKQLLMCSGVDRYYQIAKCFRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L+ VF+E  + +       R+ Y +A+ R+G+DKPD R  + + N
Sbjct: 248 SFVDVDDVIDVNERLLKKVFKEVLDVDVQIPM-KRLTYQEAMDRFGSDKPDTRFGMELIN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V+E     +F VF   L              G  G R   D   ++A+  G  GLAYI  
Sbjct: 307 VSETVKDCDFMVFKGALENGGSVRGLNAEGLGDLG-RKKIDAFVDFAKEFGAKGLAYIQL 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D     +     AK +      A+   +  + GD   F A           + R  I 
Sbjct: 366 KQDG----SVKSSFAKFMKEEEMTALIDAMRGKPGDLLLFAADKDSVVYDVLGNLRLEIG 421

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++  +I+ + + F W+ +FP  EWNEE+ +    H+PFTMP          +   ++A  
Sbjct: 422 KKYEMIDESLYNFLWVTEFPLLEWNEEQNRYTAMHHPFTMPMEEDLEYIETEPGRVRAKA 481

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G +R H +++    F  +G S+E    RFG L  AFQ G+PPH G+A 
Sbjct: 482 YDIVLNGTELGGGSVRIHRNDIQKAMFKALGFSEEDANERFGFLLEAFQYGVPPHAGLAY 541

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR+VM + G  ++R+V  FP  ++   L+  +P  V  EQL ELG+ + EN
Sbjct: 542 GLDRLVMWMTGEDSIRDVIAFPKVKDASCLMTQAPGGVDTEQLDELGIDLKEN 594


>gi|317480093|ref|ZP_07939204.1| aspartyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|316903770|gb|EFV25613.1| aspartyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 585

 Score =  600 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 223/598 (37%), Positives = 337/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            YR+H+CG+L +SDV   V L+GWV R R  GG+ F+D+RD YGITQ+V N +      E
Sbjct: 1   MYRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  R ++  N +I TG IE+   ++++L+ +   P  +    + 
Sbjct: 61  RANRLGREFVIQVKGTVNERFSK--NQHIPTGDIEIIVSELDVLNSSLTPPFTIEENTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  +  N+  R ++   +R  + ++ FIE  TPIL  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD++N  E + + +F+E          F+R+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQDDVINLFEGMAKYLFKEIRGVEMNE-PFMRMPWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAY 358
            + +      F VF     +                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDIMKGHGFPVFDNAAYIGG-----ICAEGAAHYTRKQLDVLTEFVKRPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  GNV     V K       + ++   + + GD    ++GD   K      + R
Sbjct: 352 A--RVEADGNVK--SSVDKFYAQEVLQEMKAAFNAKLGDLILILSGDDAMKTRKQLNELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW++EE ++   H+PFT P+     L   D  ++
Sbjct: 408 LEMGNQLGLRDKNKFVCLWVVDFPMFEWSDEEGRLMAMHHPFTHPKDEDIPLLDTDPTAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+VCNG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVCNGIEVGGGSIRIHDAQLQAKMFEILGFTPEKAQEQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL L +    
Sbjct: 528 GLAYGLDRWVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPSVIDQKQLDELNLIVEVKE 585


>gi|163753589|ref|ZP_02160712.1| aspartate--tRNA ligase [Kordia algicida OT-1]
 gi|161325803|gb|EDP97129.1| aspartate--tRNA ligase [Kordia algicida OT-1]
          Length = 584

 Score =  600 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 219/592 (36%), Positives = 337/592 (56%), Gaps = 15/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
            YR+HSCG+L  S +   V L+GWV + R  G +I++D+RD YGITQ++ + +      F
Sbjct: 1   MYRSHSCGELRASHITQEVTLAGWVQKSRDKGFMIWVDLRDRYGITQLIFDEERTPADIF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E AK++  E+V+ + G V+ R+++  N NI TG IE+  +++ +L+ +   P  +  E +
Sbjct: 61  EKAKTLGREFVIQVKGEVIERASK--NPNIPTGDIEILVKELTVLNASLLPPFTIEDETD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR KYR+LD+RR+ +  +++ R ++   +R  + ++ FIE  TP L  S+PEGARD
Sbjct: 119 GGEDIRMKYRYLDIRRNPVKDSLIFRHKVTMEVRKYLSSQEFIEVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DILN  E + R + +E          F R+ YD A++ YG DKPD+R  +  
Sbjct: 238 EMAFVEQEDILNVFEGLTRHLLKEIKGIEIDK--FPRMTYDHAMKTYGNDKPDIRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             + E   H +F+VF+    V            G    R   D++ +W +      L  +
Sbjct: 296 GELNEVAQHKDFKVFNSAELVVG-----IAVPGGASYTRKEIDKLIDWVKRPQVGALGMV 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + + +E G  +    V K  +  +          + GD    ++G   K  +  +  R  
Sbjct: 351 YVKCNEDG--SFKSSVDKFYDQEDLAKWADVTGAKAGDLICVLSGHTNKVRAQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ L + N   F   W+MDFP  E +EE       H+PFT P+ G   L   +   +KA
Sbjct: 409 LAERLNLRNPEEFAPLWVMDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDTNPGDVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H  E+    F ++G ++E  + +FG L  AFQ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKEIQAIMFKHLGFTEEEAKAQFGFLMDAFQYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+V +L G + +R+   FP + +  D+++ +P+ +  EQL+EL +++
Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAPIDDEQLKELSIKL 580


>gi|289661892|ref|ZP_06483473.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 588

 Score =  600 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 223/596 (37%), Positives = 337/596 (56%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + TG++E+ A +I IL+ A    LP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRTGKVEVIATRISILNKAAP--LPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RR+G+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRFGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V E    SEF VF+   +   G         G G +R   D     A   G  GLAY
Sbjct: 296 LVDVAELVKSSEFPVFTAAANDADGRVAALRIPGGAGLSRKQIDEYAAHAAKYGAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +L E+G V+   P+AK  +     A+   +   +GD  FF AG   K   F    R 
Sbjct: 356 I--KLSETGEVS--SPIAKFFSEEAFAALIKHVGAGNGDIVFFGAGGYTKVSDFMGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +E  ++  + +   W+ DFP +EW++E ++    H+PFT P     +    +  +  
Sbjct: 412 KAGKEFNLL-ADGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARTAV 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGG
Sbjct: 471 SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   
Sbjct: 531 IAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQVRPK 586


>gi|227488805|ref|ZP_03919121.1| aspartyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227091227|gb|EEI26539.1| aspartyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
          Length = 610

 Score =  600 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 235/606 (38%), Positives = 334/606 (55%), Gaps = 27/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L   + G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +S   E A  
Sbjct: 11  RTHLAGELRKENAGDTVTLTGWVARRRDHGGVIFIDLRDRSGLAQVVF-RESEVAEQAHH 69

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYP 121
           +RSE+ + + G+V +R   + N N+ +G IE++  ++EIL+ +  LP  +       E  
Sbjct: 70  LRSEFCIKVTGVVEARPEGSSNPNLPSGDIEVNVSELEILNESAALPFQIDDPSSSGEVG 129

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR+     +  R++   + R  +   +F E  TP LT S+PEGARDFL
Sbjct: 130 EETRLKYRYLDLRRERQADALRLRSKANRAARAVLDKHDFTEIETPTLTRSTPEGARDFL 189

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G++YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 190 VPARLKPGTWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 248

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E +L  ++        +     R+ Y +A+ +YG+DKPDLR  I +  
Sbjct: 249 SFVDQDDVIVLAEEILTALWGLIG--YEIKTPIPRMTYKEAMEKYGSDKPDLRFDIQIVE 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAYI  
Sbjct: 307 CTEFFKDTTFRVFQNP------YVGAVVMDGGASQPRRQLDAWQDWAKQRGAKGLAYIL- 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G ++  GPVAK++     E I   +  + GD  FF AGD     +    AR  IA
Sbjct: 360 -VGEDGTLS--GPVAKNITDAEREGIAAHVGAKPGDCIFFAAGDAKNSRALLGAARGEIA 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGMESLKG 471
            +LG+I    + F W++D P +E + +                 H+ FT P+        
Sbjct: 417 NKLGLIKEGDWAFTWVVDAPLFEPSADATASGDVALGHSSWTAVHHAFTSPKPESMDTFD 476

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D  S  A+ YD+VCNG EI  G IR H  +V  + F  +GI++E    +FG L  AF  
Sbjct: 477 TDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAREKFGFLLDAFAF 536

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ ++ EQ +E G+  
Sbjct: 537 GAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGIDPLTDAPAAITPEQRKEAGIDF 596

Query: 592 VENPKK 597
               K+
Sbjct: 597 KPKKKQ 602


>gi|19703644|ref|NP_603206.1| aspartyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|24212405|sp|Q8RGJ4|SYD_FUSNN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|19713758|gb|AAL94505.1| Aspartyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 592

 Score =  600 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 226/599 (37%), Positives = 344/599 (57%), Gaps = 16/599 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+ G+L + ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLGELRLKNIGEVVTLSGWVDTKRNVSTNLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVIGEVKERSNK--NPNIPTGEIEVFAKEIEILNACDTLPFQISGVDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR+ +  N+  R R+I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRNKMLNNLKMRHRMIMSIRNYMDNAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  +     +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVTGEE-ANYIFQRMPYAEAMDRFGSDKPDLRFGVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P      +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIINNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKVISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI    D         P+AK L+    +AI  + + + GD  F +A       S     R
Sbjct: 359 YIKLTAD-----GIASPIAKFLSEEEMKAIIEKTEAKTGDVIFIVADKKKVVHSALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLS 476
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT  +              
Sbjct: 414 LRIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFTSIKAEDLDKFLAGQTED 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I+   YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF+ G PPH
Sbjct: 474 IRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFLDAFKYGAPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL ++     
Sbjct: 534 GGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFIKSTYEK 592


>gi|299140837|ref|ZP_07033975.1| aspartate--tRNA ligase [Prevotella oris C735]
 gi|298577803|gb|EFI49671.1| aspartate--tRNA ligase [Prevotella oris C735]
          Length = 585

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 219/595 (36%), Positives = 338/595 (56%), Gaps = 20/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT++CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   D    +
Sbjct: 1   MYRTNTCGELRLSDAGKEVVLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEADDRMLCD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + + G+V  R ++  N+ I TG IE+ A+++++LS +   P  +  E + 
Sbjct: 61  NANKLGREYCIQVKGIVSERQSK--NSKIATGDIEILAKELKVLSPSLTPPFTIEDESDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR+ + KN+  R R+   +R  + + +F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRNVVRKNLELRHRMTILIRNFLDSHDFMEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++N  E + R +F+E            ++ + +A++R+G+DKPDLR  +   
Sbjct: 238 MSFVDQDDVINMFEEMARHLFKEIRGVELPKLQ--QMTWHEAMKRFGSDKPDLRFGMEFV 295

Query: 301 NVTEHFVHSE-FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQPGLA 357
            + E F     F VF +   +                +R   + + ++ +    G  GL 
Sbjct: 296 ELKEAFAGKGNFSVFDEATYIGG-----ICVPGCADYSRKQLNELTDFVKKPQVGAKGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           +I +  D          + K       + I+  +   DGD    ++GD   K        
Sbjct: 351 FIKYNTDG----TIKSSIDKFYTEDELKEIKKLMGANDGDLVLILSGDNSNKTRVQLCAL 406

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L       
Sbjct: 407 RLEMGNRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPEQ 466

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G +R H +++  + F  +G +KE  E +FG L  AF+ G PPH
Sbjct: 467 VRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTKERAEAQFGFLMNAFKYGAPPH 526

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR V +  G  ++R+   FP + +  D+++ +P  +  +QL EL +++
Sbjct: 527 AGLAFGLDRFVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPGELDQKQLDELQIKL 581


>gi|281424426|ref|ZP_06255339.1| aspartate--tRNA ligase [Prevotella oris F0302]
 gi|281401695|gb|EFB32526.1| aspartate--tRNA ligase [Prevotella oris F0302]
          Length = 585

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 219/595 (36%), Positives = 338/595 (56%), Gaps = 20/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT++CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   D    +
Sbjct: 1   MYRTNTCGELRLSDAGKEVVLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEADDRMLCD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + + G+V  R ++  N+ I TG IE+ A+++++LS +   P  +  E + 
Sbjct: 61  NANKLGREYCIQVKGIVSERQSK--NSKIATGDIEILAKELKVLSPSLTPPFTIEDESDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR+ + KN+  R R+   +R  + + +F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRNVVRKNLELRHRMTILIRNFLDSHDFMEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++N  E + R +F+E            ++ + +A++R+G+DKPDLR  +   
Sbjct: 238 MSFVDQDDVINMFEEMARHLFKEIRGVELPKLQ--QMTWHEAMKRFGSDKPDLRFGMEFV 295

Query: 301 NVTEHFVHSE-FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQPGLA 357
            + E F     F VF +   +                +R   + + ++ +    G  GL 
Sbjct: 296 ELKEAFAGKGNFSVFDEATYIGG-----ICVPGCADYSRKQLNELTDFVKKPQVGAKGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           +I +  D          + K       + I+  +   DGD    ++GD   K        
Sbjct: 351 FIKYNTDG----TIKSSIDKFYTEDELKEIKKLMGANDGDLVLILSGDNANKTRVQLCAL 406

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L       
Sbjct: 407 RLEMGNRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPEQ 466

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G +R H +++  + F  +G +KE  E +FG L  AF+ G PPH
Sbjct: 467 VRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTKERAEAQFGFLMNAFKYGAPPH 526

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR V +  G  ++R+   FP + +  D+++ +P  +  +QL EL +++
Sbjct: 527 AGLAFGLDRFVSIFAGLDSIRDCIAFPKNNSGRDVMLDAPGELDQKQLDELQIKL 581


>gi|172040629|ref|YP_001800343.1| aspartyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|238064704|sp|B1VDL1|SYD_CORU7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|171851933|emb|CAQ04909.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 606

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 242/603 (40%), Positives = 338/603 (56%), Gaps = 27/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L   D+ S V L+GWV R R HGG+IF+D+RD  G+ QVV   +S   E A +
Sbjct: 3   RTHLAGELRPGDIDSEVTLTGWVGRRRDHGGVIFIDLRDRSGVAQVVF-RESEVAERAHA 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYP 121
           +RSE+ + + G V +R   + N N+ +G +E++  ++E+L+ +  LP  +       E  
Sbjct: 62  LRSEYCVRVRGRVEARPEGSENPNLPSGAVEVNVSELEVLNESAALPFQIDDPSSAGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR +    +  R++   + R  +   +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRASQGDALRLRSKANAAARKVLERHDFTEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLKPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +L  V+   + G  V   F R+ Y DA+R YG+DKPDLR  I +  
Sbjct: 241 SFVDQEDVIALAEEILTEVWS--TAGYEVQTPFPRMTYADAMRLYGSDKPDLRFDIQITE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAYI  
Sbjct: 299 CTEFFKDTTFRVFQN------EYVGAVVMDGGASQPRRQLDAWQEWAKQRGAKGLAYIL- 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G ++  GPVAK++       I   +  + GD  FF AGD     +    AR  IA
Sbjct: 352 -VGEDGELS--GPVAKNITDDERAGIADHVGAKPGDCIFFAAGDTKSSRALLGAARGEIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGMESLKG 471
           Q+LG+I+ + + F W++D P +E   + +               H+ FT P+        
Sbjct: 409 QKLGLIDDSKWAFTWVVDAPMFEPAADARAEGDVALGNSAWTAVHHAFTSPKPEFLDSFD 468

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D  S  A+ YD+VCNG EI  G IR H  +V  + F  +GIS+E    +FG L  AF  
Sbjct: 469 QDPGSALAYAYDIVCNGNEIGGGSIRIHQRDVQERVFQVMGISQEEAREKFGFLLDAFAF 528

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +PS ++ EQ +E G+  
Sbjct: 529 GAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPSEITPEQRKESGIDA 588

Query: 592 VEN 594
              
Sbjct: 589 KPK 591


>gi|227542198|ref|ZP_03972247.1| aspartyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227182027|gb|EEI62999.1| aspartyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 610

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 236/606 (38%), Positives = 335/606 (55%), Gaps = 27/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L   + G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +S   E A  
Sbjct: 11  RTHLAGELRKENAGDTVTLTGWVARRRDHGGVIFIDLRDRSGLAQVVF-RESEVAEQAHH 69

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYP 121
           +RSE+ + + G+V +R   + N N+ +G IE++  ++EIL+ +  LP  +       E  
Sbjct: 70  LRSEFCIKVTGVVEARPEGSSNPNLPSGDIEVNVSELEILNESAALPFQIDDPSSSGEVG 129

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR+     +  R++   + R  +   +F E  TP LT S+PEGARDFL
Sbjct: 130 EETRLKYRYLDLRRERQADALRLRSKANRAARTVLDKHDFTEIETPTLTRSTPEGARDFL 189

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G++YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 190 VPARLKPGTWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 248

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E +L  ++        +     R+ Y +A+ +YG+DKPDLR  I +  
Sbjct: 249 SFVDQDDVIVLAEEILTALWGLIG--YEIKTPIPRMTYKEAMEKYGSDKPDLRFDIQIVE 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAYI  
Sbjct: 307 CTEFFKDTTFRVFQNP------YVGAVVMDGGASQPRRQLDAWQDWAKQRGAKGLAYIL- 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G ++  GPVAK++  V  E I   +  + GD  FF AGD     +    AR  IA
Sbjct: 360 -VGEDGTLS--GPVAKNITDVEREGIAAHVGAKPGDCIFFAAGDAKSSRALLGAARGEIA 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGMESLKG 471
            +LG+I    + F W++D P +E + +                 H+ FT P+        
Sbjct: 417 NKLGLIKEGDWAFTWVVDAPLFEPSADATASGDVALGHSSWTAVHHAFTSPKPESMDTFD 476

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D  S  A+ YD+VCNG EI  G IR H  +V  + F  +GI++E    +FG L  AF  
Sbjct: 477 TDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAREKFGFLLDAFAF 536

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ ++ EQ +E G+  
Sbjct: 537 GAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGIDPLTDAPAAITPEQRKEAGIDF 596

Query: 592 VENPKK 597
               K+
Sbjct: 597 KPKKKQ 602


>gi|227549176|ref|ZP_03979225.1| aspartyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078736|gb|EEI16699.1| aspartyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 602

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 237/606 (39%), Positives = 331/606 (54%), Gaps = 28/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  GDL     G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +S   E A  
Sbjct: 3   RTHLAGDLRKELDGQTVTLTGWVSRRRDHGGVIFIDLRDRSGLAQVVF-RESEVAEAAHD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV--AEELPLPVFGEREYPE 122
           +RSE+ + + G+V  R   + N N+ +G+IE++A ++E+L+   A    +  F   E  E
Sbjct: 62  LRSEYCIKVTGVVEPRPEGSANPNLASGEIEVNAVELEVLNKSAALPFQVEDFSSNEVGE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR+     +  R+    + R  +   +F E  TP LT S+PEGARDFLV
Sbjct: 122 ETRLKYRYLDLRRERQAAALRLRSDANRAAREVLSRHDFTEIETPTLTRSTPEGARDFLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R+  GS+YALPQ+PQ +KQLLM +G +RYFQIA C+RDED R+DR P EF QLD+E S
Sbjct: 182 PARLRPGSWYALPQSPQLFKQLLMVAGMERYFQIARCYRDEDFRADRQP-EFTQLDIEAS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+QDDI+   E +L  +++       +S    R+ Y +A+ +YG+DKPDLR  I + + 
Sbjct: 241 FVDQDDIIELAEEILVELWKLIG--VEISTPIPRMTYAEAMEKYGSDKPDLRFGIELVDC 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAYI  +
Sbjct: 299 TEFFKDTPFRVFQN------EYVGAVVMEGGASQPRRQLDAWQEWAKQRGAKGLAYILVQ 352

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GPVAK++      +I   +  + GD  FF AGD     +    AR  IA+
Sbjct: 353 KDG----ELSGPVAKNITDAEKASIAQHVGAKPGDCIFFAAGDTKSSRALLGAARGEIAR 408

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGMESLKGN 472
           +L +I    + F W++D P +E + +            K    H+ FT P+        +
Sbjct: 409 KLDLIKEGDWAFTWVVDAPMFEPSADATASGDVALGHSKWTAVHHAFTSPKPEYLESFDS 468

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +     A+ YD+VCNG EI  G IR H  +V  + F  +GI+ E  + +FG L  AF  G
Sbjct: 469 EPGEALAYAYDIVCNGNEIGGGSIRIHQRDVQERVFKVMGITGEETQEKFGFLLEAFAFG 528

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ +   Q +E G+   
Sbjct: 529 APPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPIPTAQRKETGVDF- 587

Query: 593 ENPKKI 598
             PKK 
Sbjct: 588 -KPKKA 592


>gi|309810778|ref|ZP_07704584.1| aspartate--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308435258|gb|EFP59084.1| aspartate--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 675

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 233/602 (38%), Positives = 328/602 (54%), Gaps = 24/602 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  +DVG  V L+GWV + R HGG+ F+D+RD  G+ QVVA  D      A  
Sbjct: 67  RTHEAGTLRAADVGDTVTLTGWVAKRRDHGGVAFVDLRDASGVVQVVA-RDEVLTGAAHG 125

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + + G V +R  + +N N+ TG++++ A +IE+LS A  LP  +       E  
Sbjct: 126 LRSEYCIKVTGEVAAREPKDVNPNLPTGEVDVVANEIEVLSEAAPLPFQIDERITVGEEA 185

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR      I  R+++  + R  +   +F+E  TP LT S+PEGARDFLVP+
Sbjct: 186 RLKYRYLDLRRKDQGDAIRLRSKVSQAARAVLNERDFVEIETPTLTRSTPEGARDFLVPA 245

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 246 RLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 304

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E + + V+        +   F R+ Y DA+ +YG+DKPDLR    +   TE
Sbjct: 305 EQDDVIELGEQIAKAVWATIG--VDLPTPFPRMTYADAMAKYGSDKPDLRFGNELVECTE 362

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+  + D
Sbjct: 363 FFRDTTFRVFQA------EYVGAVVMPGGASQPRRQLDAWQEWAKQRGAKGLAYVLVQED 416

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
                +  GPVAK+L       +   +  + GD  FF AG      +    AR  I +  
Sbjct: 417 G----SLTGPVAKNLTETEVAGLAGHVGAKPGDCIFFAAGATKASRALLGAARLEIGKRC 472

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
            +I+ N + F W++D P +E   +                 H+ FTMP+         + 
Sbjct: 473 DLIDENAWSFLWVVDAPLFEPAADAVASGDVAVGSGTWTAVHHAFTMPKAEYVDTFDTEP 532

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               A+ YD+VCNG EI  G IR H  ++  + F  +G+S+E  + +FG L  AF  G P
Sbjct: 533 GEALAYAYDMVCNGNEIGGGSIRIHRKDLQERVFKVMGLSEEDAQEKFGFLLEAFSFGAP 592

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ +S +Q +E G+     
Sbjct: 593 PHGGIAFGWDRIVSLLAGTDSIRDVIAFPKSGGGYDPLTAAPAPISAQQRKEAGVDAKPQ 652

Query: 595 PK 596
            K
Sbjct: 653 VK 654


>gi|326798552|ref|YP_004316371.1| aspartyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326549316|gb|ADZ77701.1| aspartyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 583

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 225/597 (37%), Positives = 336/597 (56%), Gaps = 18/597 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFE 60
            YRTH+CG L ++D+G  + L GWV + R  GG+ F+D+RD YG+TQ+  N   D A   
Sbjct: 1   MYRTHTCGQLTLADLGKNITLCGWVQKSRDLGGMTFIDMRDRYGVTQLAFNADDDEALRA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +  E+V+ + G V+ RS++  N  I TG+IE+    + +L+ A+  P  +  E + 
Sbjct: 61  RARELGREYVIQVRGTVIERSSK--NLKIPTGEIEIKVADLVVLNAAKLPPFLIEDETDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR+ +  N+V R ++  ++R  +  + F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRNPVRNNLVLRHQMAQAVRSFLDQQGFLEVETPVLIKSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N+G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNEGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FVEQ+DILN  E ++  +F++  N         R+ Y DA+R YG+DKPD R  +   
Sbjct: 238 MAFVEQEDILNLFEELISYLFKKVKNVEIGKL--PRMTYADAMRLYGSDKPDTRFGMQFV 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAY 358
            +      + F VF     V                 R   D + ++ +    G  GL Y
Sbjct: 296 ELNPVLQGAGFPVFDNAELVVGIKAEGC-----ASYTRKQIDALTDFVKRPQIGATGLVY 350

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  R +E G++     V K  N    +A    +D   GD    +AGD  K      + R 
Sbjct: 351 L--RYNEDGSLK--SSVDKFFNQEQLQAWATAMDANVGDLILVMAGDADKTRKQLNELRL 406

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  +LG+ + N F   W++DFP  EW+++ K+    H+PFT P+    +L       ++
Sbjct: 407 ELGNQLGLRDKNKFSALWVVDFPLLEWDDDTKRYHAMHHPFTSPKPEDIALLDTAPGDVR 466

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G IR    ++    F ++G ++E  + +FG L  AF  G PPHGG
Sbjct: 467 ANAYDMVINGTEVGGGSIRIFEKDLQQLMFKHLGFTQEEAQTQFGFLMDAFTYGAPPHGG 526

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G DR+V +  G  ++R+V  FP +    D+++ SPS++S EQL EL + I    
Sbjct: 527 IAFGFDRLVSIFAGLDSIRDVIAFPKNNAGRDVMIDSPSSISQEQLDELKIEISAKA 583


>gi|120403600|ref|YP_953429.1| aspartyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119956418|gb|ABM13423.1| aspartyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 601

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 231/607 (38%), Positives = 336/607 (55%), Gaps = 28/607 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT + G L  +D G  V L+GWV R R HGG+IF+D+RD  G +QVV        + A  
Sbjct: 13  RTRTAGSLRPADAGQTVTLAGWVARRRDHGGVIFIDLRDASGTSQVVFREGEVLTQ-AHR 71

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + + G+V  R     N  I TG++E+SA  + +L  +    LP   +    E  
Sbjct: 72  LRSEFCVAVTGVVEIRPEGNANPEIATGEVEVSATSLTVLGES--AALPFQLDETAGEEA 129

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+     I  R+++  + R  +   +F+E  TP LT S+PEGARDFLVP+
Sbjct: 130 RLKYRYLDLRREVPGNAIRLRSKVNAAARSVLAEHDFVEIETPTLTRSTPEGARDFLVPA 189

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 190 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 248

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + DD++   E +L+ ++        +     RI + DA+RR+G+DKPD+R  + +   T+
Sbjct: 249 DADDVIAVSEQILKAIWALIG--YDLPLPLPRISHADAMRRFGSDKPDMRFGLELVECTD 306

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F+ + FRVF         Y    +   G    R   D   E+A+ +G  GLAY+   + 
Sbjct: 307 YFMDTPFRVFQAP------YVGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVL--VG 358

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L+    + +   +    GD  FF AG      +     R  +A+ L
Sbjct: 359 EDGELG--GPVAKNLSDAERDGLASHVGANPGDCVFFSAGSAKAARALLGATRIEVAKRL 416

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
            +I+ + + F W++D+P +E  ++                AH+ FT P+   E+    D 
Sbjct: 417 DLIDPSAWAFTWVVDWPLFEPADDATASGDVAVGSGAWTAAHHAFTAPKPESEATFDTDP 476

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A  YD+VCNG EI  G IR H S++  + F+ +GI  +   ++FG L  AF  G P
Sbjct: 477 GSAMADAYDIVCNGNEIGGGSIRIHRSDIQERVFAMMGIDHDEARDKFGFLLDAFTFGAP 536

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRIV LL G  ++REV  FP S    D L  +P+ ++  Q +E G+     
Sbjct: 537 PHGGIAFGWDRIVALLAGLDSIREVIAFPKSGGGVDPLTDAPAPITALQRKESGID--AK 594

Query: 595 PKKILKI 601
           P+K+ K 
Sbjct: 595 PEKLDKA 601


>gi|153806333|ref|ZP_01959001.1| hypothetical protein BACCAC_00592 [Bacteroides caccae ATCC 43185]
 gi|149131010|gb|EDM22216.1| hypothetical protein BACCAC_00592 [Bacteroides caccae ATCC 43185]
          Length = 587

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 227/598 (37%), Positives = 334/598 (55%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            +RTH+CG+L +SDV   V LSGWV R R  GG+ F+D+RD YGITQ+V N +      E
Sbjct: 1   MFRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVNAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  R ++  NANI TG IE+   ++ +L+ A   P  +    + 
Sbjct: 61  RANKLGREFVIQVKGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR+ +  N+  R ++   +R  +    FIE  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRTYLDKLGFIEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI+ T E + + +F+       ++  FLR+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDIIATFEGMAKHLFKTLRGVE-LTEPFLRMSWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     V                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDIMKGHGFSVFDNAAYVGG-----ICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  G V     V K       + ++     + GD    ++GD + K      + R
Sbjct: 352 A--RVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  ++
Sbjct: 408 LEMGSQLGLRDKNKFACLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVINGVEVGGGSIRIHDAQLQAKMFEILGFTPEKAQAQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L +    
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQTQLDELNLIVDIKE 585


>gi|166712997|ref|ZP_02244204.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 588

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 222/596 (37%), Positives = 338/596 (56%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + TG++E+ A +I IL+ A    LP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRTGKVEVIATRISILNKAAP--LPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME++FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RRYG+DKPDLR  + 
Sbjct: 237 MELAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V E    SEF VF+   +   G         G   +R   D     A   G  GLAY
Sbjct: 296 LVDVAELVKSSEFPVFTAAANDADGRVAALRIPGGATLSRKQIDEYAAHAAKYGAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +L E+G V+   P+AK  +  +  A+   +   +GD  FF AG   K   F    R 
Sbjct: 356 I--KLSETGEVS--SPIAKFFSEESFAALLKHVGASNGDIVFFGAGGYTKVSDFMGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              ++  ++  + +   W+ DFP +EW++E ++    H+PFT P     +    +  +  
Sbjct: 412 KAGKDFNLV-VDGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARTAV 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGG
Sbjct: 471 SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   
Sbjct: 531 IAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQVRPK 586


>gi|111024079|ref|YP_707051.1| aspartyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|123045357|sp|Q0S0P3|SYD_RHOSR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110823609|gb|ABG98893.1| aspartate--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 602

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 234/615 (38%), Positives = 329/615 (53%), Gaps = 26/615 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L        V L+GWV R R HGG+IF+D+RD  G++QVV   + A  E A  
Sbjct: 3   RTHLAGSLRAEQAQQTVTLTGWVARRRDHGGVIFIDLRDASGVSQVVF-REGAAAEQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R     N  I TG IE++   +E+L+ +    LP   + +  E  
Sbjct: 62  LRAEYCVKVTGVVEVRPEGNQNFEIPTGAIEVNVTDLEVLNESAP--LPFQLDDQAGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+     I  R+++  + R  +    F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRREGPGHAIRLRSKVNAAARAVLAHHEFVEVETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            QDD++   E VL  +++     + +     R+ Y +A+RRYG+DKPDLR  + +    E
Sbjct: 239 NQDDVILLAEEVLSSLWKLVG--HEIKTPIARMTYAEAMRRYGSDKPDLRFGVELVECAE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF +       Y    +   G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 297 FFKDTTFRVFQQ------EYVGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL--VG 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L     E +   +  + GD  FF AG      +    AR  IA++ 
Sbjct: 349 EDGTLG--GPVAKNLTDTEREGLAAHVGAKPGDCIFFAAGTTKSSRALLGAARGEIARKQ 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGMESLKGNDL 474
            +I+ + + F W++D P +E   +                 H+ FT P+         D 
Sbjct: 407 NLIDPDAWAFVWVVDAPLFEPTADATASGDVALGYSAWTAVHHAFTSPKPESIDTFDTDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD+VCNG EI  G IR H  ++  + F  +GIS E  E +FG L  AF  G P
Sbjct: 467 GSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFKVMGISHEEAEEKFGFLLDAFAFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRI  LL G  ++REV  FP S    D L  +P+ ++ +Q +E G+     
Sbjct: 527 PHGGIAFGWDRITALLAGVDSIREVIAFPKSGGGVDPLTNAPAPITAQQRKESGVDAKPE 586

Query: 595 PKKILKISVTTILRN 609
           PK     +      +
Sbjct: 587 PKGDAASAKPDAPAD 601


>gi|284032291|ref|YP_003382222.1| aspartyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283811584|gb|ADB33423.1| aspartyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 596

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 235/613 (38%), Positives = 339/613 (55%), Gaps = 31/613 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTHS G L     G  V L+GWV R R HGG+ F+D+RD  G  QVV   +    E+A  
Sbjct: 3   RTHSAGSLRAEHTGQTVTLAGWVARRRDHGGVAFIDLRDASGTVQVVIRDE----EVAHP 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--E 122
           +R+E+ L I G V +R     N N+ TG+IE+ A ++E+L+ A  LP PV      P  E
Sbjct: 59  LRAEFCLKIVGEVSARPEGNANPNLPTGEIEVIAAEVEVLNEAAPLPFPVEEHHATPVNE 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR      +  R+++  + R  +   +F+E  TP LT S+PEGARDFLV
Sbjct: 119 EVRLKYRYLDLRRQGPGAALRLRSKVNKAARDVLARHDFVEIETPTLTKSTPEGARDFLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMS
Sbjct: 179 PARLQPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+QDD++   E +L  +++    G+ V     R+ Y +A+ R+G+DKPDLR  + +   
Sbjct: 238 FVDQDDVIALSEEILVELWK--LAGHEVQTPIQRMTYAEAMARFGSDKPDLRMGLELVEC 295

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE+F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAY+   
Sbjct: 296 TEYFKDTPFRVFQA------QYVGAVVMPGGADQPRKQLDAWQDWAKQRGAKGLAYVL-- 347

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + + G +   GPVAK+L+      +   +  + GD  FF AG      +    AR  I +
Sbjct: 348 VGQDGELG--GPVAKNLSEAERAGLADHVGAKPGDCVFFAAGPVKSSRALLGAARLEIGR 405

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGN 472
             G+I+ + + F W++D P +E  ++                 H+ FT P+         
Sbjct: 406 RGGLIDESAWSFVWVVDAPLFEPADDATAAGDVAVGSGAWTAVHHAFTSPKPESLDSFDT 465

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D  S  A+ YD+VCNG EI  G IR H  +V  + F+ +G+++E    +FG L  AF+ G
Sbjct: 466 DPGSALAYAYDIVCNGNEIGGGSIRIHREDVQKRVFTVMGLTEEEATEKFGFLLDAFKFG 525

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G DRI  LL GA ++R+V  FP S    D L  +P+ ++ EQ +E G  + 
Sbjct: 526 APPHGGIAFGWDRITALLAGADSIRDVIAFPKSGGGYDPLTAAPAPITAEQRKEAG--VD 583

Query: 593 ENPKKILKISVTT 605
             P+   K    +
Sbjct: 584 AKPESKDKAESKS 596


>gi|332756767|gb|EGJ87114.1| aspartyl-tRNA synthetase [Shigella flexneri 4343-70]
          Length = 573

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 212/576 (36%), Positives = 319/576 (55%), Gaps = 7/576 (1%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGLVMSR 80
            L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G V +R
Sbjct: 2   TLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRAR 61

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             + IN ++ TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR  + +
Sbjct: 62  DEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRPEMAQ 119

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
            +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ 
Sbjct: 120 RLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQL 179

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R +
Sbjct: 180 FKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHL 238

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
           + E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   + 
Sbjct: 239 WLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPAND 296

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
             G         G    R   D    + +  G  GLAYI       G      PVAK LN
Sbjct: 297 PKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLN 356

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
               EAI  R   QDGD  FF A +              + ++LG+ + + +   W++DF
Sbjct: 357 AEIIEAILDRTAAQDGDMIFFGADNKKIVADGMGALLLKVGKDLGLTDESKWAPLWVIDF 416

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +E ++ E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H 
Sbjct: 417 PMFE-DDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHN 475

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            ++    F  +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V 
Sbjct: 476 GDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVI 535

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            FP +     L+  +PS  +   L EL +++V+  +
Sbjct: 536 AFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAE 571


>gi|289706218|ref|ZP_06502581.1| aspartate--tRNA ligase [Micrococcus luteus SK58]
 gi|289557057|gb|EFD50385.1| aspartate--tRNA ligase [Micrococcus luteus SK58]
          Length = 604

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 226/613 (36%), Positives = 328/613 (53%), Gaps = 36/613 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTHS G+L  S +G  V ++GWV R R HGG+ F+D+RD  G  QVV   ++        
Sbjct: 3   RTHSLGELNASLIGQTVTVTGWVARRRDHGGVAFVDLRDASGFAQVVVRDEAD----FDP 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+EWVL + G V  R     N N+ +G+IEL A+ + +L+ A  LP  V    E  E  
Sbjct: 59  LRNEWVLQVIGTVERRPEGNENPNLPSGEIELIAETVTVLNTAAALPFQVDEHVEVGEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR    + +  R+ +  + R  +  E F+E  TP LT S+PEGARDFLVP+
Sbjct: 119 RLRHRYLDLRRPQPSRIMRLRSEVNRTARELLHGEGFVEVETPTLTRSTPEGARDFLVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLL   G ++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E +++ ++        V     R+ Y +A+ +YG+DKPDLR  + + ++TE
Sbjct: 238 EQDDVIALGEKIVKALWALVG--VDVPTPIRRMTYAEAMEKYGSDKPDLRFGLELTDLTE 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+  +  
Sbjct: 296 YFKDTPFRVFQN------EYVGAVVMPGGASQARRTLDAWQEWAKQRGAKGLAYVLIQ-- 347

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPV+K+++      +   +    GD  FF AG P +  +    AR  I +  
Sbjct: 348 EDGELT--GPVSKNISEEEKAGLAAAVGANPGDCVFFAAGKPKESRALLGAARVEIGRRC 405

Query: 425 GII---------NCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGG 465
           G+              + F W++D P +E   +                 H+ FT P+  
Sbjct: 406 GLFTDAGDGVAAKDADWAFVWVVDAPMFEPAADAVASGDVAVGAGAWTAVHHAFTSPKPE 465

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
                  D  S  A+ YD+VCNG EI  G IR H  +V  + F  +G+S E    +FG L
Sbjct: 466 FADTFDTDPGSALAYAYDIVCNGNEIGGGSIRIHRQDVQERVFEVMGLSPEEANEKFGFL 525

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
              F+ G PPHGGIA G DR+V LL G +++REV  FP + N  D L  +P+ ++ +Q +
Sbjct: 526 LEGFKYGAPPHGGIAFGWDRVVALLAGTESIREVIAFPKTGNGYDPLTAAPAPITAQQRK 585

Query: 586 ELGLRIVENPKKI 598
           E G+     P K 
Sbjct: 586 EAGVDAQPEPTKA 598


>gi|254556837|ref|YP_003063254.1| aspartyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300768150|ref|ZP_07078055.1| aspartate--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|254045764|gb|ACT62557.1| aspartyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300494214|gb|EFK29377.1| aspartate--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 598

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 212/597 (35%), Positives = 326/597 (54%), Gaps = 12/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             RT   G +    +G  V L GWV + R  G +IF+D+RD  GI Q+V + +  +    
Sbjct: 1   MKRTTYAGLINEDYLGQTVTLQGWVQKRRDLGSLIFIDLRDREGIVQLVFSQEFSADALA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  +R E+V+ + G V++R+A+ +N  + TG++E+     +IL+ A+  P  +  +   
Sbjct: 61  VADQLRGEYVIEVQGTVVNRNADAVNDRMKTGKVEVEIHDAKILNKAKTPPFYIQDDINV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + + +  R  I  ++     A  F +  TP LT S+PEGARD+
Sbjct: 121 SDELRLKYRYLDLRRPEMQRGLKIRNGITQAVHSYFDANGFYDIETPFLTKSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV QG FYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R DR P EF Q+DME
Sbjct: 181 LVPSRVYQGHFYALPQSPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQP-EFTQIDME 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  ++I +  E +++ V ++    +     F R+ + +A+ R+G++KPD+R  + + 
Sbjct: 240 TSFLTAEEIQSYTEGLIKQVMKDVKGVDI-KTPFTRMTWQEAMDRFGSEKPDVRFGMELK 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++     ++ F+VF   L+     +  A+P      +R   D   E+ +  G  GLA++ 
Sbjct: 299 DMGAAVSNAGFKVFDNALANGGLVKAIAVPGGADQYSRKQIDAYTEYVKRFGAKGLAWMK 358

Query: 361 WRLDESGNVAGMGPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              D        GPVAK   N  + EAI      + GD   F A             R  
Sbjct: 359 VTDD-----GFSGPVAKFFKNDGDFEAITSAAAAKPGDLLLFAADSFKVVSDTLGYLRTA 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSI 477
           IA+EL +I+ + + + W++D+P +E++E  ++   AH+PFTMP            D    
Sbjct: 414 IAKELDLIDQDQYAYLWVVDWPLFEYDEGIERWVPAHHPFTMPNEEDVHYLNDGEDPHKA 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD++ NG+E+  G IR H  E+  + F  +  +KE  + +FG L  A   G PPHG
Sbjct: 474 HAQSYDIILNGYELGGGSIRIHTRELQEKMFKALDFTKERAQEQFGFLLDALDMGFPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G+DR  MLL G  N+REV  FP +    + +  +PS VS +QL +L L I   
Sbjct: 534 GLAIGLDRFAMLLSGNDNIREVIAFPKNSKASEPMTNAPSRVSDQQLADLDLNITNP 590


>gi|260662177|ref|ZP_05863073.1| aspartyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260553560|gb|EEX26452.1| aspartyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 591

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 225/600 (37%), Positives = 337/600 (56%), Gaps = 14/600 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
             RT+  G      +G  V + GWV + R  GG+IF+D+ D  GI Q+V N   D A FE
Sbjct: 1   MKRTNYAGRTSEEQIGQEVVVKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEEEDQAAFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A   R++++L   GLV +R+   +N +I TG+IE+  ++ +IL+ ++  P  V  + + 
Sbjct: 61  VANQARNQYILEARGLVRARAE--VNPDIATGKIEIEVKEAKILAKSQTPPFEVQDDVDA 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR++DLRR  +   +  R+++ + +       +F++  TP LT S+PEGARD+
Sbjct: 119 SEDLRLKYRYIDLRRPKMMNYLKLRSKVTSIVHNYFDNNDFLDVETPELTRSTPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSRV  G FYALPQ+PQ +KQLLMA+G D+Y+QIA CFRDED R DR P EF Q+D E
Sbjct: 179 IVPSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQIAKCFRDEDLRGDRQP-EFTQIDTE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF E ++I    E +++ V +E    + V   F R+ + +A+ +YG+DKPD R  +++ 
Sbjct: 238 MSFAEPEEIQAMAEGLIKRVMKEAVGVD-VPTPFPRMEWQEAMDKYGSDKPDTRFDMLIQ 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++    S F+VFS  ++         +P      +R    +  ++ +  G  GLA++ 
Sbjct: 297 DVSDLVKDSSFKVFSATVADGNFVRAIVVPGGADKYSRKDITKKEDYIKRYGAKGLAWVK 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                       GPVAK LN     A+  RL ++ GD   F+AG     C      R  I
Sbjct: 357 VT-----EEGYNGPVAKFLNDD-ANALNERLSVKVGDLVLFVAGSFHVVCDSLGYLRESI 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+EL +I+ N F + W++++P +E++E   K   AH+PFTM             D     
Sbjct: 411 AKELDLIDENKFNYLWVINWPMFEYDEGFGKWIAAHHPFTMLNEDDLKYLEEGEDPHQAH 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG EI  G IR H  EV  + F  +G +KE  + RFG L +A + GMPP GG
Sbjct: 471 AQSYDIVLNGNEIGGGSIRIHDPEVQEKVFKALGYTKEAAQARFGFLIKALENGMPPEGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +A G+DR VMLL  A ++R+V  FP +    + L  +P TV  EQL  L L + E PK+ 
Sbjct: 531 MAFGLDRWVMLLAHADSIRDVIAFPKNSKAVEPLTAAPGTVDDEQLEVLHLNVEEAPKEA 590


>gi|282901704|ref|ZP_06309620.1| Aspartyl-tRNA synthetase [Cylindrospermopsis raciborskii CS-505]
 gi|281193467|gb|EFA68448.1| Aspartyl-tRNA synthetase [Cylindrospermopsis raciborskii CS-505]
          Length = 598

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 238/602 (39%), Positives = 354/602 (58%), Gaps = 17/602 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+     +G  V L GWV R R HGG+IFLD+RD  GI QVV++P      ++IA
Sbjct: 2   RTHYCGEPRKHHIGENVILYGWVDRHRDHGGVIFLDLRDRSGIVQVVSDPQRTPESYQIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP- 121
            S+R+E+VL I G V  R AE++N  ++TG++E+ A  IE+L+   +         E   
Sbjct: 62  NSIRNEYVLKITGRVTERPAESLNPRLVTGEVEVYADHIELLNSVSKNLPFQVSSGETEN 121

Query: 122 --ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178
             E +R KYR+LDLRR+ + KNI  R +++ +MR  +  +  FIE  TP+LT S+PEGAR
Sbjct: 122 VREDVRLKYRYLDLRRERMAKNIQLRHQVVKAMRRYLEDQEGFIEIETPVLTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+++PSRVN+G ++ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYILPSRVNEGQWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +++I+   E ++  +F+   + + + + F R+ Y DA+ +YGTDKPD R  + 
Sbjct: 241 MEMSFMSEEEIIQLNEKLVCHIFKTVQDID-LPHPFPRLRYQDAMNKYGTDKPDTRYGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V++      F+VF  +++     ++  IP      +         +   A   G  G
Sbjct: 300 LVDVSDVVQDCGFKVFRDVVAGGGMVKILPIPHGNDAISNVRIKPGGDIFREAAEAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI  R+ ++G +  +G +  +L     + I  R   ++G    F A D          
Sbjct: 360 LAYI--RVRDNGEIDTIGAIKDNLTAAQKQEILTRTAAKEGHLLLFAAADASVVNKTLDR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  IA+E  +I      F WI +FP +EWN  EK+++  H+PFT P          DL 
Sbjct: 418 LRQFIAREFNLIPPGKINFLWITEFPMFEWNANEKRLEALHHPFTAPHPDDLH----DLK 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NGFE+  G +R +  E+  + F  +G+S E   N+FG L  AF+ G PP
Sbjct: 474 TARAQAYDLVLNGFEVGGGSLRIYQREIQARVFETIGLSSEEARNKFGFLLEAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL   +++R+V  FP +Q    LL  +P+TV ++QL+EL +     P
Sbjct: 534 HGGIAYGVDRLVMLLAQEESIRDVIAFPKTQQARCLLTDAPATVEIKQLKELHVNSTVKP 593

Query: 596 KK 597
           K+
Sbjct: 594 KE 595


>gi|154490243|ref|ZP_02030504.1| hypothetical protein PARMER_00475 [Parabacteroides merdae ATCC
           43184]
 gi|154089135|gb|EDN88179.1| hypothetical protein PARMER_00475 [Parabacteroides merdae ATCC
           43184]
          Length = 613

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 228/598 (38%), Positives = 339/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFE 60
            YRT +CGDL ++D G  + L+GWV + R  GG+ F+DIRD YGITQ+V N   D+A  E
Sbjct: 29  MYRTRTCGDLRLADEGLVITLAGWVQKTRKMGGMTFVDIRDRYGITQLVFNQEVDAALCE 88

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  RS++  N NI TG+IE+   ++ +L+ A   P  +  + + 
Sbjct: 89  KANKLGREYVIQVTGTVRERSSK--NPNIPTGEIEIIVSELNVLNAAVTPPFTIEDDTDG 146

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR+ + KN+  R R+   +R  +  + F+E  TP+L  S+PEGARDF
Sbjct: 147 GDDLRMKYRYLDLRRNAVRKNLELRHRMAFEVRNYLDKQGFLEVETPVLVNSTPEGARDF 206

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 207 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 265

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+LN  E + + +F+     +     F RI + DA++ YG+DKPDLR  +   
Sbjct: 266 MSFVEQEDVLNIFEGMAKHLFKVIRGIDIKEA-FPRISWHDAMKYYGSDKPDLRFDMKFV 324

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAY 358
            + +      F VF     V                 R   D + E+ +    G  G+ Y
Sbjct: 325 ELMDIMKGHGFSVFDNAAYVGG-----ICAEGAASYTRKQLDALTEFVKRPQIGAKGMVY 379

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  GNV     V K       + ++     + GD    ++GD   K      + R
Sbjct: 380 A--RVEADGNVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDAMKTRKQLCELR 435

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A +LG+ + N F   W++DFP +EW+EE+++    H+PFT P+     L  +D  ++
Sbjct: 436 LEVAGQLGLRDKNKFACLWVIDFPLFEWSEEDQRFYAMHHPFTSPKPEDIPLLDSDTGAV 495

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H S++  + F  +G ++E  + RFG L  AF+ G PPHG
Sbjct: 496 RANAYDMVINGVEVGGGSIRIHDSKLQDKMFQLLGFTEEKAQERFGFLMNAFKYGAPPHG 555

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +P  +   QL EL L++    
Sbjct: 556 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGQLDDSQLEELCLKVDIKE 613


>gi|119868391|ref|YP_938343.1| aspartyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|166225366|sp|A1UFE5|SYD_MYCSK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119694480|gb|ABL91553.1| aspartyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 590

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 236/603 (39%), Positives = 335/603 (55%), Gaps = 28/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+ G L  +D G  V L+GWV R R HGG+IF+D+RD  G++QVV   + A  E A  
Sbjct: 3   RSHAAGSLRPADAGQNVTLAGWVARRRDHGGVIFIDLRDASGVSQVVF-REGAVLEAAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + ++G+V  R     N  I TG IE++A  + +L  +    LP   + E  E  
Sbjct: 62  LRAEFCVAVEGVVEVRPEGNENPEIPTGGIEVNATSLTVLGESAP--LPFQLDDEAGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+   K +  R+++  + R  +   +F+E  TP +T S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRREGPGKALRLRSKVNAAAREVLARHDFVEIETPTMTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + DD++   E +L+ ++      + +     RI Y +A+ R+GTDKPDLR  + +    E
Sbjct: 239 DADDVIAVSEEILKALWALIG--HDLPTPLPRITYAEAMHRFGTDKPDLRFGLELVECKE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 297 FFADTTFRVFQAP------YVGAVVMPGGASQPRRTLDGWQEWAKQRGAKGLAYVL--VG 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G +   GPVAK+L     + +   +    GD  FF AG P    +    AR  IA+ L
Sbjct: 349 DDGTLG--GPVAKNLTDAERDGLAAHVGANPGDCIFFAAGPPKSSRALLGAARIEIAKRL 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
            +I+ + + F W++D+P +E  E+                 H+ FT PQ   E+    D 
Sbjct: 407 DMIDPDAWAFTWVVDWPLFEMAEDATAAGDVAVGSGAWTAVHHAFTAPQPQSEATFDTDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               A  YD+VCNG EI  G IR H  +V  + F+ +GI  +  + +FG L  AF  G P
Sbjct: 467 AGALADAYDIVCNGNEIGGGSIRIHRRDVQERVFAMMGIEHDEAQEKFGFLLDAFTFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRI  LL    ++REV  FP S    D L G+P+ ++ +Q RE G+     
Sbjct: 527 PHGGIAFGWDRITALLARMDSIREVIAFPKSGGGADPLTGAPAPITPQQRRESGID--AK 584

Query: 595 PKK 597
           PKK
Sbjct: 585 PKK 587


>gi|116490654|ref|YP_810198.1| aspartyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|290890068|ref|ZP_06553151.1| hypothetical protein AWRIB429_0541 [Oenococcus oeni AWRIB429]
 gi|116091379|gb|ABJ56533.1| aspartyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|290480259|gb|EFD88900.1| hypothetical protein AWRIB429_0541 [Oenococcus oeni AWRIB429]
          Length = 591

 Score =  598 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 225/595 (37%), Positives = 338/595 (56%), Gaps = 11/595 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           + RT   G +     G  + L GWV + R  GG+IF+D+RD  GI Q+  + +      +
Sbjct: 4   KQRTVYAGLVNEKMAGQAITLKGWVQKRRDLGGLIFVDLRDREGIVQLTFSDEFSKDALK 63

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ I G+V  R+   IN  + TG++E+   + EIL+ ++  P  +    + 
Sbjct: 64  TAERIRSEYVISITGVVSLRAESAINPKMKTGKVEVLVHQAEILAESKTPPFDIEDGVDV 123

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E ++ KYR+LDLRR  + K ++ R++I++S    M    F++  TP L  S+PEGARD+
Sbjct: 124 NEELKLKYRYLDLRRPEMQKGLILRSKIMSSSMRFMEENGFLDIETPYLAKSTPEGARDY 183

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+  GSFYALPQ+PQ +KQLLM +GFDRYFQIA CFRDED R DR P EF QLDME
Sbjct: 184 LVPSRIYPGSFYALPQSPQLFKQLLMGAGFDRYFQIARCFRDEDLRGDRQP-EFTQLDME 242

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ Q +I+  +   +  +  +    N  SN+F  + + +A+ R+G+DKPDLR  I +H
Sbjct: 243 TSFMNQGEIMELVNRWITQIMSDVVKANIDSNSFPVLHWQEAMDRFGSDKPDLRFGIELH 302

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E    + F VF+  +      +    P       R   D   ++ +  G  GLA+I 
Sbjct: 303 DVSEIMKQTNFTVFTGAIKKGGFVKAIVAPKGATKFTRKMIDGQTDYIKRFGAKGLAWIK 362

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E+G  +  GP+AK ++      +   L + DGD  FF A             R ++
Sbjct: 363 F---ENGEFS--GPIAKFVSD-VKGQLVSFLSLSDGDLVFFAADTFSVVSDTLGYLRKYV 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+EL +I+ + ++F WI+D+P +E++E+  +   AH+PFTMP            D     
Sbjct: 417 AKELDLIDESKWDFAWIVDWPLFEYSEDFGRWIAAHHPFTMPNEEDLHYLDDGEDPHLAH 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+ SG IR H  ++  +    +G + +  E  FG L  A + G PP GG
Sbjct: 477 AQSYDLVLNGYELGSGSIRIHTMDIQKKMLKALGFTSDQAEKAFGFLLEAMEYGFPPMGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           IA G+DR+ MLL G +N+REV  FP + N  + +  +PS VS +QL ELGLR+ E
Sbjct: 537 IALGLDRLAMLLSGKENIREVIAFPKNSNATEPMTKAPSRVSEKQLAELGLRVPE 591


>gi|302206283|gb|ADL10625.1| Aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|308276525|gb|ADO26424.1| Aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 600

 Score =  598 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 239/610 (39%), Positives = 335/610 (54%), Gaps = 28/610 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +H  RTH  GDL     G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +    E
Sbjct: 2   VHVLRTHLAGDLRKDTAGQTVTLTGWVSRRRDHGGVIFIDLRDSSGLVQVVFRENDVA-E 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG---- 116
            A  +RSE+ + + G+V +R   + N N+ +G+IE++   +EIL+ A  LP  +      
Sbjct: 61  KAHHLRSEFCIKVTGVVEARPEGSENPNLASGEIEINVNDLEILNEAAALPFQIDDASQS 120

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             E  E  R KYR+LDLRR T    +  R++   + R  +   +F+E  TP LT S+PEG
Sbjct: 121 GGEVGEEARLKYRYLDLRRPTQGGALRLRSKANQAARRVLDTHDFVEIETPTLTRSTPEG 180

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDFLVP+R+  GS+YALPQ+PQ +KQLLM +G + Y+QIA C+RDED R+DR P EF Q
Sbjct: 181 ARDFLVPARLKPGSWYALPQSPQLFKQLLMVAGMEHYYQIARCYRDEDFRADRQP-EFTQ 239

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+EMSFV+QDD++   E ++  +++       +     R+ Y DA+R YG+DKPDLR  
Sbjct: 240 LDIEMSFVDQDDVIALAEEIVSELWKLIG--YNIPTPIPRMTYADAMRLYGSDKPDLRFD 297

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           I +   T++F  + FRVF         Y    +   G    R   D   EWA+ +G  GL
Sbjct: 298 IKIVECTDYFKDTTFRVFQN------EYVGAVVMEGGASQPRRQLDAWQEWAKQRGAKGL 351

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AYI   + E G ++  GPVAK++       I   +  Q GD  FF AGD     +    A
Sbjct: 352 AYIL--VGEDGELS--GPVAKNITESERAGIAAHVGAQPGDCIFFAAGDTKSSRALLGAA 407

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGM 466
           R  IA++LG+I    + F W++D P +E + +            K    H+ FT P+   
Sbjct: 408 RGEIARKLGLIKDGDWAFTWVVDAPLFESSADATASGDVALGHSKWTAVHHAFTSPKPEW 467

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
                 +     A+ YD+VCNG EI  G IR H  +V  + F  +GI++E    +FG L 
Sbjct: 468 LESFDENPGEATAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAREKFGFLL 527

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            AF  G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ + +EQ RE
Sbjct: 528 DAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPIPLEQRRE 587

Query: 587 LGLRIVENPK 596
            G+      K
Sbjct: 588 TGVDFKPKKK 597


>gi|288928261|ref|ZP_06422108.1| aspartate--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288331095|gb|EFC69679.1| aspartate--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 586

 Score =  598 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 221/595 (37%), Positives = 340/595 (57%), Gaps = 19/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT +CG+L ++D G  V L+GWV RVR  GG+ F+D+RD YGITQ+V N   D    +
Sbjct: 1   MYRTSTCGELRLADAGKTVTLAGWVQRVRKMGGMSFVDLRDRYGITQLVFNENEDKELCD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + + G V  R ++  NAN+ TG IE+ A ++ +LS +E  P  +    + 
Sbjct: 61  CANRLGREFCIQVTGTVNERQSK--NANLATGDIEIIASQLNVLSESETPPFTIEENTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  + KN+  R ++   +R  + +++FIE  TPIL  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRPNVRKNLELRHKMTILIRNFLDSKDFIEVETPILIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++N  E++ R +F+E       +    ++ + +A++RYG+DKPDLR  +   
Sbjct: 238 MSFVDQDDVINLFEDMARHLFKELRGVELPAKL-RQMPWHEAMKRYGSDKPDLRFGMEFV 296

Query: 301 NVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + +    + EF VF++   +                +R   + + ++ +    G  GL 
Sbjct: 297 ELADVLKGTGEFSVFNEAEYIGG-----ICVPGCADYSRKQLNELTDFVKRPQVGAKGLV 351

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           ++ +  D     +    + K  +      ++  +  +DGD    ++GD   K      + 
Sbjct: 352 FVKYETDG----SVKSSIDKFYSPEVFAQLKQVMGAKDGDLVLIMSGDKANKTRVQLCNL 407

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + + FE  WI+DFP +EW++EE+++   H+PFTMP      L       
Sbjct: 408 RLEMGDRLGLRDKDKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPEDVPLLDEHPER 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G +R H   +  + F  +G + E    +FG L  AF+ G PPH
Sbjct: 468 VRAQAYDFVCNGIEVGGGSLRIHDGALQEKMFGILGFTPERAMAQFGFLINAFKYGAPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL LR+
Sbjct: 528 AGLAFGLDRFVSIFAGLNSIRDCIAFPKNNSGRDVMLDAPSVIDDKQLEELNLRV 582


>gi|260436142|ref|ZP_05790112.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260414016|gb|EEX07312.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 609

 Score =  598 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 215/601 (35%), Positives = 338/601 (56%), Gaps = 20/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL   ++   V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSNGCGDLREQNIDQQVQLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGADAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           + +RSE VL ++G V +R  E++N  + TG +E+ A  I +L+  +     P+ V  E  
Sbjct: 62  EHLRSETVLQVEGKVRARPGESLNDKLATGAVEVLASGITVLNSVKGNLPFPVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR  ++ N+  R + I + R  +    FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAQTIQAARRFLEDAGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YVLPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q+ IL   E+++  +++       +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQEQILELNESLICAIWKAVKGIE-LPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
            NV++      F+VFS  +      +  A+P      +         +   A+  G  GL
Sbjct: 300 TNVSDIVKDMGFKVFSGAVKSGGAVKCIAVPGGNDAVSNVRIKPGGDVFSEAQKAGAGGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  R+ + G +  +G +  +L+    + +  R   + G    F AGD           
Sbjct: 360 AFI--RVRDGGEIDTIGAIKDNLSDEQKQELLSRTGAEPGTLLLFGAGDTATVNKALDRV 417

Query: 417 RNHIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
           R ++A+ELG++    + + + F W++DFP +E+N +E + +  H+PF  P         +
Sbjct: 418 RQYLAKELGMVKADRDNDQWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNAEDLGSDAS 477

Query: 473 DLLSI----KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
               I    +A  YDLV NG E+  G +R H S +  Q    VG+  E  + +FG L  A
Sbjct: 478 KWADILPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQEQFGFLMDA 537

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
              G PPHGG+A G+DR+VMLL G +++R+   FP +Q    L+  +P  V+ +QL EL 
Sbjct: 538 LDVGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFPKTQQARCLMTSAPGGVADKQLEELH 597

Query: 589 L 589
           +
Sbjct: 598 V 598


>gi|126434932|ref|YP_001070623.1| aspartyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|166225365|sp|A3PZ05|SYD_MYCSJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|126234732|gb|ABN98132.1| aspartyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 590

 Score =  598 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 237/603 (39%), Positives = 336/603 (55%), Gaps = 28/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+ G L  +D G  V L+GWV R R HGG+IF+D+RD  G++QVV   + A  E A  
Sbjct: 3   RSHAAGSLRPADAGQNVTLAGWVARRRDHGGVIFIDLRDASGVSQVVF-REGAVLEAAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + ++G+V  R     N  I TG IE++A  + +L  +    LP   + E  E  
Sbjct: 62  LRAEFCVAVEGVVEVRPEGNENPEIPTGGIEVNATSLTVLGESAP--LPFQLDDEAGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+   K +  R+++  + R  +   +F+E  TP +T S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRREGPGKALRLRSKVNAAAREVLARHDFVEIETPTMTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + DD++   E +L+ ++      + +     RI Y +A+RR+GTDKPDLR  + +    E
Sbjct: 239 DADDVIAVSEEILKALWALIG--HDLPTPLPRITYAEAMRRFGTDKPDLRFGLELVECKE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 297 FFADTTFRVFQAP------YVGAVVMPGGASQPRRTLDGWQEWAKQRGAKGLAYVL--VG 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G +   GPVAK+L     + +   +    GD  FF AG P    +    AR  IA+ L
Sbjct: 349 DDGTLG--GPVAKNLTDAERDGLAAHVGANPGDCIFFAAGPPKSSRALLGAARIEIAKRL 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
            +I+ + + F W++D+P +E  E+                 H+ FT PQ   E+    D 
Sbjct: 407 DMIDPDAWAFTWVVDWPLFEMAEDATAAGDVAVGSGAWTAVHHAFTAPQPQSEATFDTDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               A  YD+VCNG EI  G IR H  +V  + F+ +GI  +  + +FG L  AF  G P
Sbjct: 467 AGALADAYDIVCNGNEIGGGSIRIHRRDVQERVFAMMGIEHDEAQEKFGFLLDAFTFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRI  LL    ++REV  FP S    D L G+P+ ++ +Q RE G+     
Sbjct: 527 PHGGIAFGWDRITALLARMDSIREVIAFPKSGGGADPLTGAPAPITPQQRRESGID--AK 584

Query: 595 PKK 597
           PKK
Sbjct: 585 PKK 587


>gi|325922682|ref|ZP_08184425.1| aspartyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325546834|gb|EGD17945.1| aspartyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 583

 Score =  598 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 221/591 (37%), Positives = 332/591 (56%), Gaps = 12/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P++   F +A 
Sbjct: 2   RTHFCGLVDETMIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPENAEVFPVAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+  E VL ++G+V +R A  +N  + +G++E+ A +I IL+ A    LP        E 
Sbjct: 62  SLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIATRISILNKAAP--LPFHAHENPGEE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGARDFLVP
Sbjct: 118 TRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGARDFLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLDME +F
Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V + D+ + +E+++R +F+E  +   ++  F R+ + +A+RRYG+DKPDLR  + + +V 
Sbjct: 237 VRERDVQDFVEDMIRAIFKEVVDVE-LAAQFPRMTWAEAMRRYGSDKPDLRIALELVDVA 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E    SEF VF+   +   G         G   +R   D     A   G  GLAYI  +L
Sbjct: 296 ELVKSSEFPVFTAAANDADGRVAALRIPGGAALSRKQIDEYAAHAAKYGAKGLAYI--KL 353

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E+G V+   P+AK  +     A+   +   +GD  F  AG       F    R    ++
Sbjct: 354 SETGEVS--SPIAKFFSEEAFAALLAHVGAGNGDIVFLGAGGYNTVSDFMGALRLKAGKD 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++  + +   W+ DFP +EW+EE ++    H+PFT P     +    +  +  +  YD
Sbjct: 412 FKLV-ADTWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTAVSRGYD 470

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGGIA GI
Sbjct: 471 MVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIAFGI 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DRI  L+ G +++R+V  FP +    DL+  +PS +  EQL E+ +++   
Sbjct: 531 DRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIPAEQLAEVHVQVRPK 581


>gi|294626868|ref|ZP_06705460.1| aspartyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292598882|gb|EFF43027.1| aspartyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 588

 Score =  598 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 221/596 (37%), Positives = 337/596 (56%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + +G++E+ A +I IL+ A    LP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVSARHA--VNDKLRSGKVEVIATRISILNKAAP--LPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RR+G+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRFGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V E    S+F VF+   +   G         G   +R   D     A   G  GLAY
Sbjct: 296 LVDVAELVKASQFPVFTAAANDADGRVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +L E+G ++   P+AK  +  +  A+   +   +GD  FF AG   K   F    R 
Sbjct: 356 I--KLSETGEIS--SPIAKFFSEESFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +E  +I  + +   W+ DFP +EW+EE ++    H+PFT P     +    +  +  
Sbjct: 412 KAGKEFNLI-ADGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTAV 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGG
Sbjct: 471 SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   
Sbjct: 531 IAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQVRPK 586


>gi|86140819|ref|ZP_01059378.1| aspartyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85832761|gb|EAQ51210.1| aspartyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 582

 Score =  598 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 219/593 (36%), Positives = 337/593 (56%), Gaps = 15/593 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACF 59
            YRTH+ G L    +   V L+GWV + R  G +I++D+RD YGITQ++ + +    A  
Sbjct: 1   MYRTHNNGALRAEHINETVTLAGWVQKSRDKGFMIWVDLRDRYGITQLIFDEERTPKAVM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           ++AK++  E+V+ + G V+ R  E+ N  + TG +EL  +K+EIL+ A+  P  +    +
Sbjct: 61  DLAKTMGREFVIQVTGKVIER--ESKNPKMPTGDVELLVEKLEILNEAKTPPFTIEDATD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR+ + + ++ R ++  ++R  +  + FIE  TP L  S+PEGARD
Sbjct: 119 GGEDLRMKYRYLDIRRNPVKEKLIFRHKVSIAVRNYLSEQGFIEVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DILN  E + + + +E       S  F R+ YD+A+ +YG DKPD+R  +  
Sbjct: 238 EMAFVEQEDILNIFEGLTKHLLKEVVGFEIES--FPRMTYDEAMAKYGNDKPDIRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +     H +F+VF+    V            G    R   D++ +W +      L  +
Sbjct: 296 GELNAVAQHKDFKVFNSAELVVG-----IAVPGGASYTRKEIDKLIDWVKRPQVGALGMV 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + + +E G  +    V K  +  +          Q GD    ++G+  K  +  +  R  
Sbjct: 351 YVKCNEDG--SFKSSVDKFYDQEDLAKWAEATGAQPGDLICVLSGETSKTRAQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A +LG+   + F   W++DFP  EW+EE ++    H+PFT P+ G   L       +KA
Sbjct: 409 LATQLGLRKSDEFAPLWVVDFPLLEWDEETERYHAMHHPFTSPKPGQMELLDTKPGEVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H  E+  + F  +G +KE  + +FG L  AFQ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKEIQSKMFDYLGFTKEEAQAQFGFLMDAFQYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+V +L G + +R+   FP +    D+++ +P+T+   QL EL L++ 
Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNAGRDVMIDAPATIDAAQLEELNLKVT 581


>gi|226366319|ref|YP_002784102.1| aspartyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|254781747|sp|C1B4G8|SYD_RHOOB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226244809|dbj|BAH55157.1| aspartyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 602

 Score =  598 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 234/602 (38%), Positives = 328/602 (54%), Gaps = 26/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L        V L+GWV R R HGG+IF+D+RD  G++QVV   + A  E A  
Sbjct: 3   RTHLAGSLRAEQAQQTVTLTGWVARRRDHGGVIFIDLRDASGVSQVVF-REGAAAEQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R     N  I TG IE++  ++E+L+ +    LP   + +  E  
Sbjct: 62  LRAEYCVKVTGVVEVRPEGNQNFEIPTGAIEVNVTELEVLNESAP--LPFQLDDQAGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+     I  R+++  + R  +    F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRREGPGHAIRLRSKVNAAARAVLAHHEFVEVETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            QDD++   E VL  +++     + +     R+ Y +A+RRYG+DKPDLR  + +    E
Sbjct: 239 NQDDVILLAEEVLTSLWKLVG--HEIKTPIARMTYAEAMRRYGSDKPDLRFGVELVECAE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF +       Y    +   G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 297 FFTDTTFRVFQQ------EYVGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL--VG 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L     + +   +  + GD  FF AG      +    AR  IA++ 
Sbjct: 349 EDGTLG--GPVAKNLTDAERDGLAAHVGAKPGDCIFFAAGATKSSRALLGAARGEIARKQ 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGMESLKGNDL 474
            +I+ + + F WI+D P +E   +                 H+ FT P+         D 
Sbjct: 407 NLIDPDAWAFVWIVDAPLFEPTADATASGDVALGYSAWTAVHHAFTSPKPESIDTFDTDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD+VCNG EI  G IR H  ++  + F  +GIS E  E +FG L  AF  G P
Sbjct: 467 GSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFKVMGISHEEAEEKFGFLLDAFAFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRI  LL G  ++REV  FP S    D L  +P+ ++ +Q +E G+     
Sbjct: 527 PHGGIAFGWDRITALLAGVDSIREVIAFPKSGGGVDPLTSAPAPITAQQRKESGVDAKPE 586

Query: 595 PK 596
           PK
Sbjct: 587 PK 588


>gi|116670838|ref|YP_831771.1| aspartyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|166225316|sp|A0JXA1|SYD_ARTS2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116610947|gb|ABK03671.1| aspartyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 596

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 230/604 (38%), Positives = 331/604 (54%), Gaps = 27/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    +G  V L+GWV R R HGG+ F+D+RD  G++QVV   +    E+   
Sbjct: 3   RTHDLGSLRSEHIGQTVTLAGWVGRRRDHGGVAFVDLRDASGVSQVVVREE----EVFHG 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL + G V  R     N  + TGQIE+ A+K+ IL+ ++ LP  +    E  E  
Sbjct: 59  LRNEYVLQVIGTVSQRPEGNENPALATGQIEVIAEKVTILNTSDPLPFQIDEHVEVGEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R K+R+LDLRR    +N+  R+      R  +  + ++E  TP LT S+PEGARDF+VP+
Sbjct: 119 RLKHRYLDLRRPGPARNMRLRSEANRVARELLHRDGYVEIETPTLTRSTPEGARDFVVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLL   GF++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDDI++  E++++ +++       +     RI Y DA+ RYG+DKPDLR  + +  +TE
Sbjct: 238 EQDDIISLGESIVKALWQLI--DVEIPTPIQRITYADAMARYGSDKPDLRFGLELTELTE 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + F VF         Y    +   G    R   D   EWA+ +G  GLAY+ ++  
Sbjct: 296 FFKDTNFGVFKAP------YVGAVVMPGGASQARRALDAWQEWAKQRGAKGLAYVLFK-- 347

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +A  GPVAK+L       +   +  + GD  FF AG+     +    AR  I    
Sbjct: 348 EDGELA--GPVAKNLTDTERAGLADAVGAKPGDCIFFAAGEKTPSRALLGAARVEIGHRT 405

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
           G+IN   + FCW++D P +E                +    H+ FT P+         D 
Sbjct: 406 GLINPADWAFCWVVDAPMFEPAAAAVASGDVAVGAGQWTAVHHAFTSPKPEFMDSFDKDP 465

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  ++ YD+VCNG EI  G IR H  +V  + F  +G+ K   E +FG L   F+ G P
Sbjct: 466 ESALSYAYDIVCNGNEIGGGSIRIHERDVQERVFELMGLDKADAETKFGFLLEGFKFGAP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DR+V LL G +++R+V  FP S    D L  +P+ ++ +Q +E G+     
Sbjct: 526 PHGGIAFGWDRVVALLAGVESIRDVIAFPKSGGGYDPLTQAPAPITAQQRKEAGVDFKPE 585

Query: 595 PKKI 598
            KK 
Sbjct: 586 AKKA 589


>gi|88606895|ref|YP_504813.1| aspartyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|123722838|sp|Q2GLD8|SYD_ANAPZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|88597958|gb|ABD43428.1| aspartyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 598

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 300/605 (49%), Positives = 398/605 (65%), Gaps = 9/605 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M+ YRTH C  L +S VG  V LSGW+ R R HGGI+F+D+RD YGITQ+V N   D   
Sbjct: 1   MNMYRTHLCNALNLSHVGEEVTLSGWIFRKRDHGGILFIDLRDFYGITQLVLNESSDQEL 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F  A+S+  E V+ + G V +RS +TIN ++ TG +E++   +   S A+ LP+ V    
Sbjct: 61  FNYARSIGLESVITVKGTVAARSEDTINTSLSTGHVEVAVHTLVTESAADALPIHVPTST 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
            +PE +R KYRFLDLR D +  N++ R+ +I+ MR  M +  FIE  TPILTASSPEGAR
Sbjct: 121 NHPEDLRLKYRFLDLRCDKVKSNMLLRSAVISEMRKAMESRGFIEVQTPILTASSPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV+ G FYALPQAPQ +KQLLMASGFD+YFQIAPCFRDED R+DR PGEFYQLD
Sbjct: 181 DYLVPSRVHAGKFYALPQAPQIFKQLLMASGFDKYFQIAPCFRDEDARADRSPGEFYQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV Q+D+ + ME VLR +F +F+   +VS  F RI Y DA+ RYGTDKPDLRNPII
Sbjct: 241 VEMSFVTQEDVFSVMEPVLRDIFTKFAGNRSVSPTFPRITYKDAMLRYGTDKPDLRNPII 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V+E F+ S F+ F + ++          P K     R+F D   E+A+  G  GL Y
Sbjct: 301 IADVSEVFLRSNFKTFQEGVARGMVVRAIPAP-KTSEHPRSFFDSKVEYAKKIGARGLGY 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D        GPVAK L+      I+    +  GDS FF++    K    +   R 
Sbjct: 360 ITFSTDN----TVKGPVAKFLSDTELANIQTLAGVGPGDSVFFVSDAADKAAELSGSVRE 415

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  EL +I  + F+FCWI+DFP++++  E  K+ F+HNPF+MPQGG+++L  ++ L I 
Sbjct: 416 LLGTELNLIEKDTFKFCWIVDFPYFQY--ENGKLAFSHNPFSMPQGGLDALSSSNPLDIV 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG EI+SG IRNH  +++ +AFS VG S E V+  FG L RAF+ G+PPHGG
Sbjct: 474 AYQYDIVCNGIEISSGAIRNHKLDILYKAFSMVGYSPEAVDAEFGALTRAFRFGVPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           IA G+DRIVMLL    N+RE+  FP++Q   DLLMG+PS V+   L+EL L +   PK  
Sbjct: 534 IAPGVDRIVMLLADVPNIREIIYFPLTQMGEDLLMGAPSEVNQSHLKELSLALNITPKAA 593

Query: 599 LKISV 603
            K S 
Sbjct: 594 GKTSS 598


>gi|294665399|ref|ZP_06730687.1| aspartyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292604810|gb|EFF48173.1| aspartyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 588

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 221/596 (37%), Positives = 337/596 (56%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + +G++E+ A +I IL+ A    LP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIATRISILNKAAP--LPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RR+G+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRFGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V E    S+F VF+   +   G         G   +R   D     A   G  GLAY
Sbjct: 296 LVDVAELVKASQFPVFTAAANDADGRVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +L E+G ++   P+AK  +  +  A+   +   +GD  FF AG   K   F    R 
Sbjct: 356 I--KLSETGEIS--SPIAKFFSEESFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +E  +I  + +   W+ DFP +EW+EE ++    H+PFT P     +    +  +  
Sbjct: 412 KAGKEFNLI-ADGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTAV 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGG
Sbjct: 471 SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   
Sbjct: 531 IAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQVRPK 586


>gi|254422068|ref|ZP_05035786.1| aspartyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196189557|gb|EDX84521.1| aspartyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 598

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 231/601 (38%), Positives = 346/601 (57%), Gaps = 17/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R+  CG L    +   V L GWV R R HGG++FLD+RD  G  Q+V++P+     + +A
Sbjct: 2   RSLYCGQLRAEQIEKTVTLYGWVDRRRDHGGVVFLDLRDRTGTVQIVSDPERTPASYPVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGERE 119
           + VR+E+V+ + G V  R  E++N  + TG++E+ A ++ ILS   +          E  
Sbjct: 62  EEVRNEYVVKVVGRVTQRPPESLNEKLPTGEVEIYADELTILSAVRKQMPFQVSTAEEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRRD +  N+  R  ++ ++R  +   E+F+E  TPILT S+PEGAR
Sbjct: 122 VREDLRLKYRYLDLRRDRMAHNMRLRHEVVKAIRRFLEDQEDFMEVETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DF++PSRVN+G ++ALPQ+PQ +KQ+LM +G DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DFILPSRVNEGEWFALPQSPQLFKQILMVAGVDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF++Q++IL   E +L  +F+     +     F R+ Y +A+ RYG+DKPD R  + 
Sbjct: 241 MEMSFMDQEEILGLNEKLLAHIFKAVKGVDI-PIPFPRLTYQEAMDRYGSDKPDTRYGME 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V++    S F+VFS  ++     +V  IP      +         + + A   G  G
Sbjct: 300 LVDVSDIVKDSGFKVFSGAVASGGQVKVLPIPGGNEAISNVRIKPKGDLFKVATDAGARG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AYI  R+ E G +  +G +  +L     + +  R   Q G    F AG      +    
Sbjct: 360 VAYI--RVREGGEIDTIGAIKDNLTTEQKQVLLERTGAQPGHLLLFGAGSISTVNATLDK 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  IA EL +I+ +  +  W+ DFP +EWN +E + +  H+PFT P          DL 
Sbjct: 418 LRQAIAAELKLIDESKTDLLWVTDFPMFEWNADENRYEALHHPFTAPHPDD----VEDLT 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YD+V NG+EI  G +R +  +V  + F  +G+S E   ++FG L  AF+ G PP
Sbjct: 474 TARAVAYDIVFNGYEIGGGSLRIYQPDVQAKVFETIGLSSEEANDKFGFLLEAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL G +++R+   FP +Q   DLL  +PS V  +QL+EL +     P
Sbjct: 534 HGGIAYGLDRLVMLLAGEQSIRDAIAFPKTQQARDLLTHAPSRVDDKQLKELSVASTYKP 593

Query: 596 K 596
           K
Sbjct: 594 K 594


>gi|238922193|ref|YP_002935707.1| aspartyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238873865|gb|ACR73573.1| aspartyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 598

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 219/588 (37%), Positives = 345/588 (58%), Gaps = 11/588 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
            R+H C ++  +D+G  V + GWV + R  G +IF+D+RD  GI Q++ + +      F+
Sbjct: 9   KRSHRCTEVSSADIGKKVTVMGWVAKRRNLGSLIFVDLRDRSGILQILFDENIIGKEGFD 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A ++R+E+V+ ++G V+ RS   +N N+ TG IE++A+ + ILS +E  P P+    + 
Sbjct: 69  KAYTLRNEFVIAVEGEVIKRSG-AVNENLKTGDIEIAAKTLRILSESETPPFPIEENIQT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYR LDLRR  +  NI+ R+++    R  +  E F+E  TP+LT S+PEGARD+
Sbjct: 128 KEDIRLKYRCLDLRRPDIQSNIIMRSKVATLTRAFLANEGFLEIETPMLTKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQ+PQ +KQ+LM SG+DRY QIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRIHPGKFYALPQSPQLFKQMLMCSGYDRYMQIARCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E +L  +F+E  + + V     R+ + +A+ R+G+DKPDLR  + + 
Sbjct: 247 LSFVDVDDVIDVNERLLAYLFKEVLDVD-VKLPIQRMTWQEAMDRFGSDKPDLRFGMELQ 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV++      F VF+  L             +G    R   D + ++A+  G  GLAYI 
Sbjct: 306 NVSDIVKDCGFGVFTGALENGGSVRGINAKGQG-SMPRKKIDALVDFAKGYGAKGLAYIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D     +     AK +      A+   +D + GD   F A       +     R  +
Sbjct: 365 IHEDG----SYKSSFAKFMTEDQMNALVKAMDGEAGDLLLFAADRNKIVWNVLGALRVEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ++G+++ + ++F W+ +FP +EW++EE++    H+PFTMP      +   +  +++A 
Sbjct: 421 ANQMGLLDKSDYKFLWVTEFPQFEWSDEEERYVAMHHPFTMPMDEDLDMLETNPGAVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H ++V  + F  +G++ EV   +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTEIGGGSVRIHQADVQSRMFKALGLTDEVANEKFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
            G+DR+VML+    ++R+V  FP  ++   LL  +P  V  +QL EL 
Sbjct: 541 YGLDRLVMLMAKRDSIRDVIAFPKVKDATCLLTNAPDVVDAKQLDELS 588


>gi|28378622|ref|NP_785514.1| aspartyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|308180778|ref|YP_003924906.1| aspartyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|38258331|sp|Q88VQ8|SYD_LACPL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|28271458|emb|CAD64363.1| aspartate--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|308046269|gb|ADN98812.1| aspartyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 598

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 212/597 (35%), Positives = 326/597 (54%), Gaps = 12/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             RT   G +    +G  V L GWV + R  G +IF+D+RD  GI Q+V + +  +    
Sbjct: 1   MKRTTYAGLINEDYLGQTVTLQGWVQKRRDLGSLIFIDLRDREGIVQLVFSQEFSADALA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  +R E+V+ + G V++R+A+ +N  + TG++E+     +IL+ A+  P  +  +   
Sbjct: 61  VADQLRGEYVIEVQGTVVNRNADAVNDRMKTGKVEVEIHDAKILNKAKTPPFYIQDDINV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + + +  R  I  ++     A  F +  TP LT S+PEGARD+
Sbjct: 121 SDELRLKYRYLDLRRPEMQRGLKIRNGITQAVHSYFDANGFYDIETPFLTKSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV QG FYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R DR P EF Q+DME
Sbjct: 181 LVPSRVYQGHFYALPQSPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQP-EFTQIDME 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  ++I +  E +++ V ++    +     F R+ + +A+ R+G++KPD+R  + + 
Sbjct: 240 TSFLTAEEIQSYTEGLIKQVMKDVKGVDI-KTPFTRMTWQEAMDRFGSEKPDVRFGMELK 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++     ++ F+VF   L+     +  A+P      +R   D   E+ +  G  GLA++ 
Sbjct: 299 DMGVAVSNAGFKVFDNALANGGLVKAIAVPGGADQYSRKQIDAYTEYVKRFGAKGLAWMK 358

Query: 361 WRLDESGNVAGMGPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              D        GPVAK   N  + EAI      + GD   F A             R  
Sbjct: 359 VTDD-----GFSGPVAKFFKNDGDFEAITSAAAAKPGDLLLFAADSFKVVSDTLGYLRTA 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSI 477
           IA+EL +I+ + + + W++D+P +E++E  ++   AH+PFTMP            D    
Sbjct: 414 IAKELDLIDQDQYAYLWVVDWPLFEYDEGIERWVPAHHPFTMPNEEDVHYLNDGEDPHKA 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD++ NG+E+  G IR H  E+  + F  +  +KE  + +FG L  A   G PPHG
Sbjct: 474 HAQSYDIILNGYELGGGSIRIHTRELQEKMFKALDFTKERAQEQFGFLLDALDMGFPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G+DR  MLL G  N+REV  FP +    + +  +PS VS +QL +L L I   
Sbjct: 534 GLAIGLDRFAMLLSGNDNIREVIAFPKNSKASEPMTNAPSRVSDQQLADLDLNITNP 590


>gi|254775890|ref|ZP_05217406.1| aspartyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 591

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 231/600 (38%), Positives = 328/600 (54%), Gaps = 26/600 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+ G L  SD G  V L+GWV R R HGG+IF+D+RD  GITQVV   D    + A  
Sbjct: 3   RSHAAGSLRSSDAGQQVTLAGWVARRRDHGGVIFIDLRDASGITQVVF-RDPDVLKQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + GLV  R     N  I TG IE++A  + +L  +    LP   +    E +
Sbjct: 62  LRAEFCVAVTGLVEIRPEGNANPEIATGDIEVNASSLTVLGESAP--LPFQLDEPAGEEL 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRRD     I  R+++  + R  +   +F+E  TP +T S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRRDAPAAAIRLRSKVNAAAREVLARHDFVEIETPTITRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 180 RLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +D++   E +L  ++        +     RI Y DA+ RYG+DKPDLR  + +   +E
Sbjct: 239 DAEDVIAISEEILAALWALIG--YEIPRPIPRISYADAMARYGSDKPDLRFGLELVECSE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 297 FFKDTTFRVFQAP------YVGAVVMPGGASQPRRTLDGWQEWAKQRGAKGLAYVL--VG 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L+      +   +    GD  FF AG      +    AR+ IA  L
Sbjct: 349 EDGELG--GPVAKNLSDAERAGLAGHVGAAPGDCIFFAAGPAKPSRALLGAARSEIAHRL 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
           G+I+   + F W++D P +E  ++                 H+ FT P+ G E     D 
Sbjct: 407 GLIDPQAWAFVWVVDPPLFEPADDATAAGDVAVGSGAWTAVHHAFTAPKPGYEDAIETDT 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            ++ A  YD+VCNG EI  G IR H  ++  + F+ +G+       +FG L  AF  G P
Sbjct: 467 GNVLADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDHAEAREKFGFLLEAFTFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRI  LL    ++REV  FP +    D L  +P+ ++ +Q +E G+ +  +
Sbjct: 527 PHGGIAFGWDRINALLSRVDSIREVIAFPKTGGGVDPLTDAPAPITEQQRKESGIDVKPD 586


>gi|218259683|ref|ZP_03475326.1| hypothetical protein PRABACTJOHN_00985 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224954|gb|EEC97604.1| hypothetical protein PRABACTJOHN_00985 [Parabacteroides johnsonii
           DSM 18315]
          Length = 585

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 229/598 (38%), Positives = 338/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFE 60
            YRT +CGDL ++D G  + L+GWV + R  GG+ F+DIRD YGITQ+V N   D+A  E
Sbjct: 1   MYRTRTCGDLRLADEGLVITLAGWVQKTRKMGGMTFVDIRDRYGITQLVFNQEVDAALCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  RS++  N NI TG+IE+    + IL+ A   P  +  + + 
Sbjct: 61  KANKLGREYVIQVTGTVRERSSK--NPNIPTGEIEIIVSNLNILNAAVTPPFTIEDDTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR+ + KN+  R R+   +R  +  + F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRNAVRKNLELRHRMAFEVRNYLDKQGFLEVETPVLVNSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+LN  E + + +F+     +     F RI + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDVLNIFEGMAKHLFKVIRGVDIKEA-FPRISWHDAMKYYGSDKPDLRFDMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAY 358
            + +      F VF     V                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDIMKGHGFSVFDNAAYVGG-----ICAEGAASYTRKQLDALTEFVKRPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  GNV     V K       + ++     + GD    ++GD   K      + R
Sbjct: 352 A--RVEADGNVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDAMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A +LG+ + N F   W++DFP +EW+EE+++    H+PFT P+     L  +D  ++
Sbjct: 408 LEVAGQLGLRDKNKFACLWVIDFPLFEWSEEDQRFYAMHHPFTSPKPEDIPLLDSDTGAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H S++  + F  +G ++E  + RFG L  AF+ G PPHG
Sbjct: 468 RANAYDMVINGVEVGGGSIRIHDSKLQDKMFQLLGFTEEKAQERFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +P  +   QL EL L++    
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGQLDDSQLEELCLKVDIKE 585


>gi|300856529|ref|YP_003781513.1| aspartyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300436644|gb|ADK16411.1| aspartyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 590

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 223/592 (37%), Positives = 341/592 (57%), Gaps = 13/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT+ CG+L  S++G  + + GWV R R  GG+IF+D+RD  GI Q+V     +   FE 
Sbjct: 9   KRTNMCGELRESNIGEKITVMGWVQRKRNLGGLIFVDLRDRTGILQIVFGEKINKEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           + +V+SE+ +   G ++ R  E+ N  I TG +E+  + I+I S ++  P+ +    +  
Sbjct: 69  SDNVKSEYCIAATGTIVKR--ESPNTEIPTGMVEVKGEYIKIFSESQTPPIYIKENLDAA 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + + ++ R +    +R  +  E F+E  TP+L  S+PEGARD+L
Sbjct: 127 ENIRLKYRYLDLRRPDMQRILMTRHKTAKVVRDFLDEEGFLEIETPMLGKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQ+PQ +KQLLM SG+DRYFQI  CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYNGKFYALPQSPQLFKQLLMVSGYDRYFQIVKCFRDEDLRANRQP-EFTQIDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQDD++N  E  ++ VF++  N + V     R+ Y  A+ +YG+DKPDLR  + +++
Sbjct: 246 SFVEQDDVINLNERFIQRVFKKILNVD-VKLPIERMPYKIAMEKYGSDKPDLRFGMEIND 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E   + +F+VF   +          +P       R   D++ E+ +  G  GL +I +
Sbjct: 305 ISEVVKNIDFKVFQSAIEAGGSVRAIKVP-NSAKMGRKQIDKLVEFVKDYGAKGLVWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D          ++K L   +T+ I  +L+   GD    +A             R H+A
Sbjct: 364 KED-----GIKSSISKFLTEEDTKNILNKLEAVPGDLILVVADKNKVVFESLGALRVHMA 418

Query: 422 QELGIINCN-CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           +E GI++ N  F F W+ +FP   +NE+E++    H+PFT P         +D   ++A 
Sbjct: 419 KETGILDGNDEFRFVWVTEFPLLSYNEDEQRYQAEHHPFTAPMDEDIQYLESDPGRVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  +GIS+E    +FG L  AF+ G PPHGG+A
Sbjct: 479 AYDIVLNGEELGGGSIRIHDTKLQERMFKVIGISQENAWEKFGYLLEAFKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G DR+VM L    N+++V  FP +QN    L  +P+ V   QL+ELG+ I 
Sbjct: 539 YGFDRMVMFLAKTDNIKDVIAFPKNQNAFCPLTEAPNVVDESQLKELGISIK 590


>gi|296327393|ref|ZP_06869942.1| aspartate--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296155508|gb|EFG96276.1| aspartate--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 592

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 225/599 (37%), Positives = 343/599 (57%), Gaps = 16/599 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+ G+L + ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLGELRLKNIGEVVTLSGWVDTKRNVSTNLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIKVIGEVKERSNK--NPNIPTGEIEIFAKEIEILNTCDTLPFQISGVDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR+ +  N+  R R+I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRNKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  +     +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVTGEE-ANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P      +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKVISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI    D         P+AK L+    +AI  + + + GD  F +A       S     R
Sbjct: 359 YIKLTAD-----GIASPIAKFLSEEEMKAIIEKTEAKTGDVIFIVADKKKVVHSALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLS 476
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT  +              
Sbjct: 414 LRIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFTSIKAEDLDKFLAGQTED 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I+   YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF+ G PPH
Sbjct: 474 IRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFLDAFKYGAPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A GIDR +M++L  +++R+V  FP +     L+  +P+ V  +QL EL ++     
Sbjct: 534 GGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNIVDEKQLEELFIKSTYEK 592


>gi|260912175|ref|ZP_05918729.1| aspartate-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260633702|gb|EEX51838.1| aspartate-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 586

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 220/595 (36%), Positives = 342/595 (57%), Gaps = 19/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT +CG+L ++D G  V L+GWV RVR  GG+ F+D+RD YGITQ+V N   D    +
Sbjct: 1   MYRTSTCGELRLADAGKTVTLAGWVQRVRKMGGMSFVDLRDRYGITQLVFNENEDKELCD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + + G+V  R ++  NAN+ TG IE+ A ++ +LS ++  P  +    + 
Sbjct: 61  SANRLGREFCIQVTGVVNERQSK--NANLPTGDIEIIASQLNVLSESQTPPFTIEENTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  + KN+  R ++   +R  + +++FIE  TPIL  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRPNVRKNLELRHKMTILIRNFLDSKDFIEVETPILIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++N  E++ R +F+E       +   L++ + +A++ YG+DKPDLR  +   
Sbjct: 238 MSFVDQDDVINLFEDMARHLFKELRGVELPAKL-LQMPWHEAMKLYGSDKPDLRFGMEFV 296

Query: 301 NVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + +    + +F VF++   +                +R   + + ++ +    G  GL 
Sbjct: 297 ELADVLKGTGDFSVFNEAEYIGG-----ICVPGCADYSRKQLNELTDFVKRPQVGAKGLV 351

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           ++ +  D     +    + K  +      ++  +  +DGD    ++GD   K      + 
Sbjct: 352 FVKFEADG----SVKSSIDKFYSPEVFAQLKQAMGAKDGDLVLIMSGDKANKTRIQLCNL 407

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + + FE  WI+DFP +EW++EE+++   H+PFTMP      L  +    
Sbjct: 408 RLEMGDRLGLRDKDKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDDHPER 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G +R H   +  + F  +G + E    +FG L  AF+ G PPH
Sbjct: 468 VRALAYDFVCNGIEVGGGSLRIHDGALQEKMFGILGFTPERAMAQFGFLINAFKYGAPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR V +  G  ++R+   FP + +  D+++ +PS +  +QL EL LRI
Sbjct: 528 AGLAFGLDRFVSIFAGLNSIRDCIAFPKNNSGRDVMLDAPSVIDDKQLEELNLRI 582


>gi|116628635|ref|YP_821254.1| aspartyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|122266771|sp|Q03IB4|SYD_STRTD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116101912|gb|ABJ67058.1| aspartyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|312279286|gb|ADQ63943.1| Aspartyl-tRNA synthetase, putative [Streptococcus thermophilus
           ND03]
          Length = 583

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 228/590 (38%), Positives = 347/590 (58%), Gaps = 17/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP   D+A  E 
Sbjct: 3   RSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENTDAAVVET 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N N+ TG +EL  + +++L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGTVEAR--EQANDNLPTGAVELKVEDLKVLNTAKTTPFEIKDGVEAS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +++R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHTIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLNEQEIQDITEGLIAKVMKETKGVE-VTLPFPRMSYDDAMNNYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VF++     P  +   +       +R   D++ ++A+  G  GLA++  
Sbjct: 299 LTELVKDVDFKVFAEA----PAVKAIVVKGNADKYSRKSIDKLTDFAKQFGAKGLAWVKM 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G +A  GPVAK L  +  E +   L +++ D   F+A       +     RN IA
Sbjct: 355 T---DGVLA--GPVAKFLTSIE-EKLTDALQIEENDLVLFVADTLEIANNTLGALRNQIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL +I+   F F W++D+P +EW+EEE +   AH+PFT+P     +    DL  ++A  
Sbjct: 409 KELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDLSKVRAVA 468

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  ++  +    +G S+E    +FG L  A   G PPHGG+A 
Sbjct: 469 YDIVLNGYELGGGSLRINQKDLQERMLKALGFSEESAYEQFGFLLEAMDYGFPPHGGLAL 528

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL L +
Sbjct: 529 GLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHV 578


>gi|331697356|ref|YP_004333595.1| aspartyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326952045|gb|AEA25742.1| aspartyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 594

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 238/597 (39%), Positives = 330/597 (55%), Gaps = 17/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+IF+D+RD  G  QVV        E A  
Sbjct: 2   RTHPAGTLRADHAGQTVTLAGWVARRRDHGGVIFIDLRDSSGSAQVVFREGEMA-ERAHR 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+V+ + G V  R A   N  + TG+IE+ A  + +LS +  LP P+    E  E I
Sbjct: 61  LRSEFVVQVTGEVARRPAGNENPELATGEIEVLATDLTVLSESAPLPFPIDDHTEVGEEI 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R K+R+LDLRR      +  R+      R  +   +F+E  TP LT S+PEGARDFLVP+
Sbjct: 121 RLKHRYLDLRRTGPAAALRMRSEANRIARTVLHERDFVEVETPTLTRSTPEGARDFLVPA 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 181 RLRPGSWYALPQSPQLFKQLLMVAGTERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            QDD++   E V   ++ E +          R+ Y +A+ RYG+DKPDLR  I +  +TE
Sbjct: 240 SQDDVIELGEAVTAALWRELAGYEI-PLPIPRMTYAEAMARYGSDKPDLRFGIELTELTE 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   EWAR +G  GLAY+   + 
Sbjct: 299 YFSATSFRVFQA------DYVGAVVMPGGASQPRRQFDAWQEWARQRGARGLAYVT--VG 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L+ V  + +   +    GD+ FF AG P    +    AR  IA+ +
Sbjct: 351 EDGTLG--GPVAKNLSDVERDGLAKAVGADPGDAIFFAAGHPSDARALLGAARGEIARRV 408

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEK----KIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           G+++ + + F WI+D P +E   ++K         H+PFT P                A+
Sbjct: 409 GLVDESAWSFVWIVDAPMFERVRDDKGEEIGWTAVHHPFTSPNEDWLDRFEEAPDQALAY 468

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H S+V  + F+ +G+ +   + +FG L  AFQ G PPHGGIA
Sbjct: 469 AYDIVANGNEIGGGSIRIHRSDVQQRVFALLGMDEAEQQEKFGFLLDAFQYGPPPHGGIA 528

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G DRI MLL GA+++R+V  FP +    D L  +P+ ++  Q +E G+       K
Sbjct: 529 FGWDRICMLLSGAESLRDVIAFPKTGGGFDPLTQAPAPITAAQRKEAGVDATPPKPK 585


>gi|313157402|gb|EFR56825.1| aspartate--tRNA ligase [Alistipes sp. HGB5]
          Length = 585

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 226/599 (37%), Positives = 333/599 (55%), Gaps = 18/599 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            YRTH+CG L   DV   V L+GWV +VR  G + F+D+RD YGITQ+V    S     E
Sbjct: 1   MYRTHTCGCLRADDVNRTVTLAGWVQKVRNLGAMTFIDLRDRYGITQIVVEEHSPAEARE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  EWV+ + G V+ RS++  N  + TG IE++A+K+ +L  AE  P  +    + 
Sbjct: 61  TACKLGREWVVQVTGKVVERSSK--NPKMATGDIEVAAEKVVVLHEAEVPPFTIEETSDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  L +N++ R ++   +R  + +E F+E  TP L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRPPLQRNMILRHKMAQEIRRFLDSEGFLEIETPYLVNSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR++   FYALPQ+PQ  KQLLM +G+D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMSPNQFYALPQSPQTLKQLLMVAGYDKYFQIVRCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+L   E   + +F+E  +         R+ + +A+ +YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDVLEIFERWAKHMFKEVMDIELTEPL-RRMPWIEAMEKYGSDKPDLRFGMEFA 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQPGLAY 358
           ++T+      F VF     V                 R   D + E+ + Q  G  GL +
Sbjct: 297 DITDLAKGHGFSVFDDAEYVTGFAATGC-----AVYTRKQIDALTEFVKRQQIGAKGLIW 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  R++ESG       + K        A+  R   + GD  F + G   K  +     R 
Sbjct: 352 I--RVEESG---VKSSIDKFYTPDEVRAMADRCGAKAGDMVFILCGKKFKTLTQLCALRL 406

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +AQ+LG+ +   F   WI+DFP +EW++E ++    H+PFT P+        +D   ++
Sbjct: 407 EVAQQLGLRDPKKFAPLWIVDFPLFEWDDETQRYYAMHHPFTSPKLEDVQYIDSDPGRVR 466

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD VCNG EI  G IR H S++  + F  +G + E  + RFG L  AF+ G PPHGG
Sbjct: 467 ANAYDFVCNGTEIGGGSIRIHDSKLQAKMFEVLGFTAEEAQVRFGFLMDAFKFGAPPHGG 526

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +A G DR+  L  G+ ++R+   FP +    D+++ +P  +   QL EL L +V+  +K
Sbjct: 527 LAFGFDRLCSLFGGSDSIRDYIAFPKNNAGRDVMLDAPGCIDQAQLDELCLSLVKPAEK 585


>gi|317503259|ref|ZP_07961314.1| aspartate--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315665616|gb|EFV05228.1| aspartate--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 585

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 225/599 (37%), Positives = 339/599 (56%), Gaps = 20/599 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT++CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   D +  +
Sbjct: 1   MYRTNTCGELRLSDAGKEVVLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEADDRSLCD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + I G+V  R ++  N  I TG IE+  + ++ILS +   P  +  E + 
Sbjct: 61  AANKLGREYCIQIKGVVSERQSK--NPKIDTGDIEILVKTLQILSPSLTPPFTIEDESDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR+ + KN+  R R+   +R  + ++NFIE  TPIL  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRNAVRKNLELRHRMTILIRNFLDSQNFIEVETPILIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++N  E + R +F+E            ++ + +A++R+G+DKPDLR  +   
Sbjct: 238 MSFVDQDDVINLFEEMARHLFKEIRGVELPKLQ--QMTWHEAMKRFGSDKPDLRFGMEFV 295

Query: 301 NVTEHFVHSE-FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + + F     F VF +   +                +R   + + ++ +    G  GL 
Sbjct: 296 ELKDAFAGKGTFSVFDEAKYIGG-----ICVPGCADYSRKQLNELTDFVKRPQVGAKGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           YI +  D          + K  +      I+  +   DGD    ++GD   K        
Sbjct: 351 YIKYNTDG----TIKSSIDKFYSEDELLEIKKVMGANDGDLVLILSGDNANKTRIQLCAL 406

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L  +    
Sbjct: 407 RLEMGDRLGLRDKNVFKCLWIIDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLESQPEK 466

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G +R H +++  + F  +G +KE  E +FG L  AF+ G PPH
Sbjct: 467 VRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTKERAEAQFGFLMNAFKYGAPPH 526

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+A G+DR V +L G  ++R+   FP + +  D+++ +P  +  +QL EL L++    
Sbjct: 527 AGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLDAPGMLDQKQLDELQLKLDIKE 585


>gi|322412865|gb|EFY03773.1| aspartyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 582

 Score =  598 bits (1542), Expect = e-168,   Method: Composition-based stats.
 Identities = 228/595 (38%), Positives = 347/595 (58%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++ 
Sbjct: 1   MKRSMYAGRVREEHIGTTITLKGWVGRRRDLGGLIFIDLRDREGVMQLVINPEDVSSDVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +RSE+V+ ++GLV +R     N  + TG +EL    + IL+ A+  P  +  + E
Sbjct: 61  ATAERLRSEYVIEVEGLVEARQ--QANDKLATGMVELKVSALTILNTAKTTPFEIKDDVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDIVEGMIAKVMKETKGID-VTLPFPRLSYDVAMNSYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T      +F+VFS+  +V        +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTATVKGIDFKVFSEATAVK----AIVVKGNADRYSRKDIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G +A  GPVAK L  + TE +  +L + + D   F+A       +     RN 
Sbjct: 353 KVT---DGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVADTLEVANNTLGALRNR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVQA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E+    F  +G + E   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKEMQELMFKALGFTAEEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L+I  +
Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSPVSEKQLEELSLQIESH 581


>gi|317968273|ref|ZP_07969663.1| aspartyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 607

 Score =  598 bits (1542), Expect = e-168,   Method: Composition-based stats.
 Identities = 220/604 (36%), Positives = 339/604 (56%), Gaps = 26/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           R+H CGDL  S  G  V+L GWV R R HGG+IF+D+RD  G  Q+  +PD+    F +A
Sbjct: 2   RSHGCGDLRQSATGQAVQLCGWVDRSRDHGGVIFIDLRDRSGTVQITVDPDNGAEMFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           + +R+E V+ ++G V  R A+ IN  + TGQIE+ A  I +L+  +      + V  E  
Sbjct: 62  EHLRNETVIQVEGKVRERPADAINDKLSTGQIEVLASSIRVLNSVKGNLPFAVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR+ ++ N+  R + I + R  +  + FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRERMNSNLRLRAQTIQTARRFLEEQGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLDM
Sbjct: 182 YILPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q+ IL   E+++  +++       +   F R+ + +A+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQEQILELNESLIAAIWKSVKGIE-LPRPFPRLTWHEAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
            NV++      F+VFS  ++     +  A+P      +         +   A+  G  GL
Sbjct: 300 VNVSDLVADMGFKVFSGAVASGGSVKCIAVPGGNDAVSNVRIKPGGDVFSEAQKAGAGGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  R+ E G +  +G +  +L+      +  R   + G    F AGD           
Sbjct: 360 AFI--RVREGGEIDTIGAIKDNLSDEKKAELLKRTGAEPGTLILFGAGDTATVNKALDRV 417

Query: 417 RNHIAQELGIINCNC----FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
           R ++A+ELG++  +     + F W++DFP +E+N +E + +  H+PF  P        G+
Sbjct: 418 RQYLARELGMVKADGENDSWNFLWVVDFPMFEFNADENRYEALHHPFCAPNTDD---LGS 474

Query: 473 DLLS-------IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
           D  +        +A  YDLV NG E+  G +R H S +  Q    VG+  E    +FG L
Sbjct: 475 DPAAWAETLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLETVGLPLEEANAQFGFL 534

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             A   G PPHGG+A G+DR+VMLL G +++R+   FP +Q    L+  +P  V+ +QL 
Sbjct: 535 MEALDMGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFPKTQQARCLMTSAPGGVAEKQLE 594

Query: 586 ELGL 589
           EL +
Sbjct: 595 ELHV 598


>gi|332523744|ref|ZP_08399996.1| aspartate--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332315008|gb|EGJ27993.1| aspartate--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 582

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 224/595 (37%), Positives = 348/595 (58%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    ++ 
Sbjct: 1   MKRSMYAGHVRSEHIGQELTLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEETNADVV 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+++RSE+V+ + G+V  R     N  + TG +EL   ++ IL+ ++  P  +    E
Sbjct: 61  KNAEAIRSEYVIEVQGVVQERQ--QANDQLATGSVELKVTELTILNTSKTTPFEIKDAVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +   +FI+  TP+LT S+PEGARD
Sbjct: 119 VGDETRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLDFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V ++    + V   F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDLVEGMIAKVMKDTKGID-VKLPFPRMSYDDAMNFYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T+     +F+VFS+     P  +   +  K    +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTQLVKDVDFKVFSEA----PAVKAIVVKDKADQFSRKDIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             ++D        GPVAK L  ++   +   L + D D   F+A +     +     RN 
Sbjct: 353 K-KVDGL----LAGPVAKFLTEID-SRLTEALHITDNDLILFVADELTIANNTLGALRNR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ELG+I+   F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 LAKELGLIDNKKFNFLWVVDWPMFEWSEEEDRYMSAHHPFTLPTEASAKELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G +++    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINHRDMQERMFKALGFTRDAANEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS +QL EL L++  +
Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSDKQLDELSLQVESH 581


>gi|227538291|ref|ZP_03968340.1| aspartate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241806|gb|EEI91821.1| aspartate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 587

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 229/595 (38%), Positives = 332/595 (55%), Gaps = 20/595 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           MH  RTH+CG+L +SD+G  V LSGWV + R  GG+ F+D+RD YGITQ+  N D     
Sbjct: 1   MH--RTHTCGELRISDLGKSVTLSGWVQKSRDLGGMTFIDVRDRYGITQLTFNADDNEQL 58

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
              A+ +  E+V+ ++G V+ RS++  N+ I TG IE+    +EIL+ ++  P  +  E 
Sbjct: 59  RASARELGREYVIKVEGQVIERSSK--NSKIPTGDIEIKVSSLEILNASKLPPFTIEDET 116

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  + +R K+R+LDLRR+ + +N++ R ++   +R  +  +NF+E  TP+L  S+PEGAR
Sbjct: 117 DGGDDLRMKFRYLDLRRNPVRQNLILRHKLAQEIRRYLDEQNFLEVETPVLIKSTPEGAR 176

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DF+VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D
Sbjct: 177 DFVVPSRMNAGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQID 235

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            EMSFVEQ+DILN  E + + +F+        S    R+ Y DA+R YG+DKPD R  + 
Sbjct: 236 CEMSFVEQEDILNMFEGLAKHLFKTVKGFELGSV--PRMTYADAMRLYGSDKPDTRFGMQ 293

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGL 356
              + E      F VF +   V              G  R   D + ++ +    G  GL
Sbjct: 294 FVELNELTKGKGFPVFDQAELVVGINANGC-----AGYTRKQLDALTDYVKRPQVGATGL 348

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            Y   R +E G +     V K       +      D + GD    +AG   K      + 
Sbjct: 349 VYA--RYNEDGTIK--SSVDKFYTEEQLKEWAAAFDGKPGDLFLIMAGPTDKVRKQLNEL 404

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +  +LG+ + N F   W++DFP  EW+EE  +    H+PFT P+     L   +   
Sbjct: 405 RLEVGNQLGLRDKNKFAPLWVLDFPLLEWDEESGRYHAMHHPFTSPKPEDIPLLDTNPGE 464

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD V NG EI  G IR H  E+    F ++G + E  + +FG L  AF  G PPH
Sbjct: 465 VRANAYDFVLNGSEIGGGSIRIHDKELQSLMFRHLGFTPEDAQKQFGFLMEAFTYGAPPH 524

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GG+A G DR+V +  G   +R+V  FP + +  D+++ +P+T+   QL EL L +
Sbjct: 525 GGLAFGFDRMVSVFAGLDTIRDVIAFPKNNSGRDVMIDAPATIDQAQLDELNLAL 579


>gi|78048842|ref|YP_365017.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|97197021|sp|Q3BQE6|SYD_XANC5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78037272|emb|CAJ25017.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 588

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 220/596 (36%), Positives = 337/596 (56%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + +G++E+ A +I IL+ A    LP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIATRISILNKAAP--LPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RRYG+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V E    S+F VF+       G     +   G   +R   D     A   G  GLAY
Sbjct: 296 LVDVAELVKASQFPVFTAAADDADGRVAALLIPGGASLSRKQIDEYAAHAAKYGAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +L E+G V+   P+AK  +  +  A+   +   +GD  FF AG   K   F    R 
Sbjct: 356 I--KLSETGEVS--SPIAKFFSEESFAALLKHVGASNGDIVFFGAGGYTKVSDFMGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              ++  ++  + +   W+ DFP +EW++E ++    H+PFT P     +    +  +  
Sbjct: 412 KAGKDFNLV-ADGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARTAV 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGG
Sbjct: 471 SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   
Sbjct: 531 IAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQVRPK 586


>gi|34762827|ref|ZP_00143813.1| Aspartyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27887529|gb|EAA24613.1| Aspartyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 592

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 225/599 (37%), Positives = 342/599 (57%), Gaps = 16/599 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+ G+L V ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLGELRVKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NPNIPTGEIEVFAKEIEILNACDTLPFQISGVDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  +     +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVTGEE-ANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P      +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKVISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI    D         P+ K L+    +AI  + + + GD  F +A       S     R
Sbjct: 359 YIKLTAD-----GITSPIVKFLSEEEMKAIIEKTEAKTGDVIFIVADKKKVVASALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLS 476
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT  +              
Sbjct: 414 LKIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFTSIKAEDLDKFLAGQTED 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I+   YDLV NG EI  G IR    ++    F  +G+S++  + +FG    AF+ G PPH
Sbjct: 474 IRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQKEAKAKFGFFLDAFKYGAPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL ++     
Sbjct: 534 GGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDDKQLEELFIKSTYEK 592


>gi|237744013|ref|ZP_04574494.1| aspartyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229431242|gb|EEO41454.1| aspartyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 592

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 226/599 (37%), Positives = 341/599 (56%), Gaps = 16/599 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANP---DSACF 59
           YRTH+ G+L + ++G  V LSGWV   R     + F+D+RD  G TQ+V N         
Sbjct: 3   YRTHNLGELRLKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNVLLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NLNIPTGEIEVFAKEIEILNACDTLPFQISGIDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  +     +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVTGEE-ANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P      +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKIISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI    D         P+AK L+    +AI  +   + GD  F +A       S     R
Sbjct: 359 YIKLTAD-----GITSPIAKFLSEDEMKAIIEKTQAKTGDVIFIVADKKKVVVSALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLS 476
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT  +              
Sbjct: 414 LKIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFTSIKAEDLDKFLAGQTED 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I+   YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF+ G PPH
Sbjct: 474 IRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFGFFLDAFKYGAPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL ++     
Sbjct: 534 GGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFIKSTYEK 592


>gi|242310434|ref|ZP_04809589.1| aspartyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239522832|gb|EEQ62698.1| aspartyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 583

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 241/596 (40%), Positives = 343/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H C DL   D+G  V+L GW +  R HGGI+F+D+RD  G+ Q+V +P       +IA
Sbjct: 2   RSHYCADLDEKDIGREVKLCGWCNTYRDHGGIVFIDLRDRSGLVQLVFDPKDFEQSHKIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL   G V  R     N  + TG+IE+   ++ I + +   P+ V G+    E
Sbjct: 62  SEVRDEYVLIAKGKVRKRGEGLENPKLKTGKIEVLVSELSIENKSLTPPIAV-GDESVGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   L +  + R+++  ++R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 DVRLKYRYLDLRNPRLQEIFITRSKVAQAVRNTLSNLGFLEIETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R DR P EF Q+D+EMS
Sbjct: 181 PSRVHHGEFYALPQSPQLFKQLLMVSGFDKYFQIAKCFRDEDLRLDRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQ D++   E+VL+ +F        V   F    Y + +  YG+DKPDLR  + +  V
Sbjct: 240 FVEQKDVMGVAESVLKSIFGACG--IEVQTPFPHYTYKEVMETYGSDKPDLRYDLPLVEV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
           ++ FV S   +F+ I   +      A+  KGG    +R       E+ R  G  GLAY+ 
Sbjct: 298 SDLFVDSSNEIFASIAKDSKKNRFKALCVKGGDSFFSRKTLGEAEEFVRKFGAKGLAYLQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + +E       GP+ K ++  N + +  R+    GD  FF AG       +    R  I
Sbjct: 358 IKENE-----IKGPLVKFISEQNLKTLLERVGASVGDIVFFGAGAKKIVWDYMGRLRQKI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ++G+IN + ++F W++DFP +E N++   I   H+PFTMP      L+  D+  I + 
Sbjct: 413 ANDMGMINESVYKFLWVVDFPMFERNDD-GSISALHHPFTMP----RDLEVEDIEEINSV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NGFEI  G IR H  E+  + F  +GI++E  +++F  L  A Q G PPHGGIA
Sbjct: 468 AYDVVLNGFEIGGGSIRIHKQEIQSKVFELLGITQEEAKDKFSFLLEALQFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DRI+MLL  A ++R+V  FP +Q     L  +PS    EQLREL +R+ E  K
Sbjct: 528 FGLDRIIMLLCNAHSIRDVIAFPKTQKATCPLTDAPSPAGEEQLRELHIRVRETKK 583


>gi|58617416|ref|YP_196615.1| aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|81311310|sp|Q5FG09|SYD_EHRRG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|58417028|emb|CAI28141.1| Aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 590

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 297/596 (49%), Positives = 409/596 (68%), Gaps = 9/596 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACF 59
           M+ YRTH C +L    +   V LSGWV+R R HG IIF+D+RDHYGITQ+V N  D+  F
Sbjct: 1   MNVYRTHLCNELREEHIDQTVTLSGWVYRKRDHGKIIFVDLRDHYGITQLVFNDSDTTIF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           ++  ++R E V+ I G+V +R + TIN  + TG IE+    I I + ++ LP+ +   ++
Sbjct: 61  QLITTLRLESVITIKGIVKARDSSTINETLDTGSIEVIVSSINIETASDILPINIASMQD 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           Y E IR  YRFLDLRRD +  NI+ R+++I  +R  M    FIE  TPILT+SSPEGARD
Sbjct: 121 YSEDIRLTYRFLDLRRDKVKNNIILRSKVITEIRKSMENMGFIEIQTPILTSSSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR++ G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 YLVPSRIHHGKFYALPQAPQLFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV Q+DI N +E ++  +F +FS   T++  F +I Y DA+  YG+DKPDLRNP+++
Sbjct: 241 EMSFVTQEDIFNIIEPLMINIFSKFS-SKTINKEFPKISYHDAMLYYGSDKPDLRNPLVI 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARSQGQPGLAY 358
            +VTE F  SEF++F+   ++  G  V AIPA     N R+F D   E+A++ G  GL Y
Sbjct: 300 QDVTEIFRDSEFKIFNS--NIKQGMVVRAIPAPNTAHNPRSFFDSKIEFAKTLGAQGLGY 357

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  D        GP+AK L+    + I++  +++ GDS FF++    K   FA + R 
Sbjct: 358 ITFIDDSLAK----GPIAKFLDKDRLDNIKLICNIKAGDSVFFVSEIADKAALFAGEVRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + +EL +I  N F+FCW++DFP+++++ +EK I+F HNPF+MPQGG+E+L+  D L+I 
Sbjct: 414 LLGKELNLIEENTFKFCWVIDFPYFKYDHKEKSINFFHNPFSMPQGGLEALENQDPLNIL 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG EI+SG IRNH   +M +AFS  G +KE+V+ +F  L RAF+ G PPHGG
Sbjct: 474 AYQYDIVCNGIEISSGAIRNHKLNIMYKAFSIAGYTKEMVDEKFKALTRAFKFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA GIDRIVMLL    N+REV  FP++Q+  DLLMGSPS +  + L+ L L I++ 
Sbjct: 534 IAPGIDRIVMLLADVPNIREVICFPLNQSGEDLLMGSPSEIDNDHLKLLSLNIIKK 589


>gi|255009372|ref|ZP_05281498.1| aspartyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313147129|ref|ZP_07809322.1| aspartyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313135896|gb|EFR53256.1| aspartyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 585

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 224/598 (37%), Positives = 334/598 (55%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            +RTH+CG+L +SDV   V+LSGWV R R  GG+ F+D+RD YGITQ+V N   D+   E
Sbjct: 1   MFRTHTCGELRISDVNKQVKLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEIDAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ I G V  R ++  N NI TG IE+   ++ IL+ A   P  +    + 
Sbjct: 61  RANKLGREYVIQIVGTVNERFSK--NGNIPTGDIEIIVSELNILNSAITPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR+ +  N+  R ++   +R  +    F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D++ T E + + +F+   N   ++  F R+ + +A++ YG+DKPD+R  +   
Sbjct: 238 MSFVEQEDVIVTFEGMAKHLFKVIRNIE-LTEPFPRMPWSEAMKLYGSDKPDIRFGMEFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     +                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDILKGHGFSVFDNAAYIGG-----ICAEGAASYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  G V     V K       + ++     + GD    ++GD   K      + R
Sbjct: 352 A--RIEADGTVK--SSVDKFYTQEVLQQLKEAFGAKPGDLILILSGDDAMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  ++
Sbjct: 408 LEMGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RANAYDMVINGVEVGGGSIRIHDSQLQNKMFELLGFTPERAQEQFGFLMNAFKFGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +P+ +   QL EL L +    
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLEELNLIVDIKE 585


>gi|21243880|ref|NP_643462.1| aspartyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|24212401|sp|Q8PHU5|SYD_XANAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|21109482|gb|AAM37998.1| aspartyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 588

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 222/596 (37%), Positives = 337/596 (56%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + +G++E+ A +I IL+ A    LP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIATRISILNKAAP--LPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RR+G+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRFGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V E    S+F VF+   +   G         G   +R   D     A   G  GLAY
Sbjct: 296 LVDVAELVKASQFPVFTAAANDADGRVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +L E+G V+   P+AK  +  +  A+   +   +GD  FF AG   K   F    R 
Sbjct: 356 I--KLSETGEVS--SPIAKFFSEESFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +E  +I  + +   W+ DFP +EW+EE ++    H+PFT P     +    +  +  
Sbjct: 412 KAGKEFDLI-ADGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTAV 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGG
Sbjct: 471 SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   
Sbjct: 531 IAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQVRPK 586


>gi|55821936|ref|YP_140378.1| aspartyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|62287521|sp|Q5M283|SYD_STRT2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|55737921|gb|AAV61563.1| aspartyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
          Length = 583

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 228/590 (38%), Positives = 347/590 (58%), Gaps = 17/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP   D+A  E 
Sbjct: 3   RSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENADAAVVET 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N N+ TG +EL  + +++L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGTVEAR--EQANDNLPTGAVELKVKDLKVLNTAKTTPFEIKDGVEAS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +++R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHTIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLNEQEIQDITEGLIAKVMKETKGVE-VTLPFPRMSYDDAMNNYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VF++     P  +   +       +R   D++ ++A+  G  GLA++  
Sbjct: 299 LTELVKDVDFKVFAEA----PAVKAIVVKGNADKYSRKSIDKLTDFAKQFGAKGLAWVKM 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G +A  GPVAK L  +  E +   L +++ D   F+A       +     RN IA
Sbjct: 355 T---DGVLA--GPVAKFLTSIE-EKLTDTLQIEENDLVLFVADTLEIANNTLGALRNQIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL +I+   F F W++D+P +EW+EEE +   AH+PFT+P     +    DL  ++A  
Sbjct: 409 KELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDLSKVRAVA 468

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  ++  +    +G S+E    +FG L  A   G PPHGG+A 
Sbjct: 469 YDIVLNGYELGGGSLRINQKDLQERMLKALGFSEESAYEQFGFLLEAMDYGFPPHGGLAL 528

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL L +
Sbjct: 529 GLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHV 578


>gi|15675898|ref|NP_270072.1| aspartyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|24212418|sp|Q99XL0|SYD_STRP1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|13623134|gb|AAK34793.1| putative aspartyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
          Length = 582

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 347/595 (58%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++ 
Sbjct: 1   MKRSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +RSE+V+ ++G V +R     N  + TG +EL    + IL+ A+  P  +  + E
Sbjct: 61  ATAERLRSEYVIEVEGFVEARQ--QANDKLATGMVELKVSALTILNTAKTTPFEIKDDVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T     ++F+VFS+     P  +   +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTVTVKGNDFKVFSEA----PAVKAIVVKGNADRYSRKDIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G +A  GPVAK L  + TE +  +L + + D   F+A       +     RN 
Sbjct: 353 KVT---DGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVADTLEVANNTLGALRNR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I  +
Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQIESH 581


>gi|307717874|ref|YP_003873406.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306531599|gb|ADN01133.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 622

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 244/595 (41%), Positives = 349/595 (58%), Gaps = 11/595 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EI 61
            RT +CG L  +D G  V L+GWVHR R HGGI F+++RD YGITQVV + +S      +
Sbjct: 36  KRTTTCGALRATDAGKEVILNGWVHRKRDHGGIHFINLRDRYGITQVVVDEESPEEVRRL 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            ++++ E+ + + G+V  R     N  + TG IE+ A  I  LS +E LP P+    +  
Sbjct: 96  VEALKYEYCIAVKGVVRLRPETMRNPQMPTGDIEVLATGIRPLSASEILPFPIDDAIDAR 155

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +YR+LDLRR  + +N+  R  +    R  ++ + F E  TP    S+PEGARDFL
Sbjct: 156 EELRLQYRYLDLRRPRMQRNLTLRHLVAWHAREYLVGKGFYEIETPTFIRSTPEGARDFL 215

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R++ G FYALPQ+PQ +KQLLM +GFD+YFQIA C+RDED R DR P EF Q+DMEM
Sbjct: 216 VPARLHPGRFYALPQSPQLFKQLLMVAGFDKYFQIARCYRDEDARGDRQP-EFTQIDMEM 274

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV QDD+L   E ++  +F++    + +S  F R+ Y++A+ RYGTDKPDLR  + + +
Sbjct: 275 SFVTQDDVLAETEGLMAHIFQKALGVD-LSLPFPRLTYEEALDRYGTDKPDLRYGLELKD 333

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            T H     F+ F  +++     +   +   G   +R   + + E A++    GLA++  
Sbjct: 334 FTPHVDKGSFQAFRNVVAQGGVVK-ALVVEGGASFSRKEIEALEEVAKTYRAAGLAWM-- 390

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++ E G   G+G   K        A+   L  + GD    +       C+     R  +A
Sbjct: 391 KVTEGGLEGGVG---KFYQG-TAPALITSLGARPGDLILLVGDAWKTACTALGAVRTAVA 446

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +  G+I    F FCW++DFP +EWNEEE+K D AH+ FTMP+     L   D  ++KA  
Sbjct: 447 RTRGLIPEGAFSFCWVVDFPMFEWNEEEQKWDPAHHMFTMPREEHLPLLEEDPGAVKAAA 506

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLVCNG+E+ASG IR H  E+  + F  VG S+E   +RFG L  AF+ G PPHGGIA 
Sbjct: 507 YDLVCNGYELASGSIRIHDPELQRRIFKVVGFSEEEAASRFGFLTTAFKYGPPPHGGIAP 566

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VM++ G + +REV  FP +      L GSP+ V   QL EL LR+V   +
Sbjct: 567 GLDRLVMIMAGEETIREVIAFPKTAAGLSPLDGSPAEVDPAQLEELHLRVVLPEE 621


>gi|291515552|emb|CBK64762.1| aspartyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 584

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 217/598 (36%), Positives = 322/598 (53%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            YRTH+CG L   +V   V L+GWV +VR  G + F+D+RD YGITQ+V    S     E
Sbjct: 1   MYRTHTCGCLRACNVNQTVTLAGWVQKVRNLGAMTFIDLRDRYGITQIVVEEHSPAEARE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               V  EWV+ + G V+ R ++  N  + TG IE++A+K+ IL  AE  P  +    + 
Sbjct: 61  TVCRVGREWVIQVVGKVVERQSK--NPKMPTGDIEVTAEKVAILHEAEVPPFTIEEVSDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  L +N++ R ++   +R  +  E F+E  TP L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRPPLQRNMILRHKMAQEIRRFLSDEGFLEIETPCLVGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR++   FYALPQ+PQ  KQLLM +G+D+YFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMSPNQFYALPQSPQTLKQLLMVAGYDKYFQIVRCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+L   E   + +F              R+ + +A+ +YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDVLEIFERWAKHMFRHVMGIELTEPL-RRMPWIEAMEKYGSDKPDLRFGMEFA 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQPGLAY 358
            +T+      F VF +   +                 R   D + E+ + Q  G  GL +
Sbjct: 297 EITDLAKGHGFSVFDEAEYITGFAATGC-----AAYTRKQIDSLTEFVKRQQIGAKGLVW 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I    D          + K  +     A+  R     GD  F + G   K  +     R 
Sbjct: 352 IRVAED-----GVKSSIDKFYSPEEVRAMAERCGAVAGDMVFILCGKKFKTLTQLCALRL 406

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +AQ+LG+ +   F   W++DFP +EW++E ++    H+PFT P+        +D   ++
Sbjct: 407 EVAQQLGLRDPQKFAPLWVVDFPLFEWDDETQRYYAVHHPFTSPKLEDVQYLDSDPGRVR 466

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD VCNG EI  G IR H S++  + F  +G + E  + RFG L  AF+ G PPHGG
Sbjct: 467 ANAYDFVCNGTEIGGGSIRIHDSKLQEKMFELLGFTPEEAQKRFGFLMNAFKYGAPPHGG 526

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G DR+  L  G++++R+   FP +    D+++ +P  +   QL EL L++ +  +
Sbjct: 527 LAFGFDRLCSLFGGSESIRDYIAFPKNNAGRDVMLDAPGYIDQTQLDELYLQLRKPEE 584


>gi|308177518|ref|YP_003916924.1| aspartate--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744981|emb|CBT75953.1| aspartate--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 595

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 225/610 (36%), Positives = 326/610 (53%), Gaps = 27/610 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    +G  V L+GWV R R HGG+ FLD+RD  G+ QVV   +    E    
Sbjct: 3   RTHQLGVLNAEHIGQQVTLTGWVARRRDHGGVAFLDLRDASGVAQVVVRDE----EDFHP 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL I G V  R     N N+ TGQIE+ A+ + +L+ A  LP  V    E  E  
Sbjct: 59  LRNEFVLQILGTVERRPEGNENPNLPTGQIEVIAETVTVLNTAAPLPFQVDEHVEVGEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR T  +NI  R+      R  +  + +IE  TP LT S+PEGARDF+VP+
Sbjct: 119 RLRHRYLDLRRPTPARNIRLRSEANRVARNLLHDQGYIEIETPTLTRSTPEGARDFVVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLL   GF++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 179 RLTPGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           E+DDI+   E ++  ++        V     R+ Y +A+ +YG+DKPDLR  + +  +TE
Sbjct: 238 EEDDIIELGEKLVTELWNLI--DVQVPTPIRRMAYSEAMAKYGSDKPDLRFGLELTEMTE 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F ++ F+VF         Y    +   G    R   D   E+A+ +G  GLAY+  +  
Sbjct: 296 YFANTSFKVFQS------EYVGAVVMPGGASQPRRTLDAWQEFAKQRGAKGLAYVLIK-- 347

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +A  GPVAK+L+      +        GD  FF AG   +  +     R  I    
Sbjct: 348 EDGELA--GPVAKNLSDEEKAGLAAATGASAGDCIFFSAGKKNESRALLGSVRVEIGHRT 405

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
           G+I    + F WI+D P +E   +                 H+ FT P+         D 
Sbjct: 406 GLIKEGDWAFVWIVDAPMFEAASDAVASGDVAVGAGAWTAVHHAFTSPKPEFMDTFDTDP 465

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  ++ YD+VCNG EI  G IR H  +V  + F  +G+++E  + +FG L   F+ G P
Sbjct: 466 ASALSYAYDIVCNGNEIGGGSIRIHQRDVQERVFKLMGVTQEQADTQFGFLLEGFKYGAP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DR++ LL  ++++R+V  FP +    D L  +P+ ++ +Q +E G+     
Sbjct: 526 PHGGIALGWDRVLQLLTNSESIRDVIAFPKTGGGFDPLTSAPAPITPQQRKEAGIDFKPE 585

Query: 595 PKKILKISVT 604
            KK  +    
Sbjct: 586 KKKAEETEAK 595


>gi|325001175|ref|ZP_08122287.1| aspartyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 614

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 230/596 (38%), Positives = 319/596 (53%), Gaps = 19/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L   + G  V L+GWV R R HGG+IF+D+RD  G  QVV        E A  
Sbjct: 3   RTHPVGTLRAENAGQTVTLAGWVARRRDHGGVIFIDLRDRSGSAQVVFREGEMA-ERAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + + G V+ R     N+ + TG IE++   + +LS A  LP P+       E I
Sbjct: 62  LRSEFCVQVVGEVVRRPEGNENSELPTGDIEVTVTGLTVLSEAAPLPFPIDEHTGVGEEI 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  +R+LDLRR      +  R+ +  + R  + AE+FIE  TP LT S+PEGARDF+VP+
Sbjct: 122 RLTHRYLDLRRSGPASAMKLRSDVNKAARDVLAAEDFIEVETPTLTRSTPEGARDFVVPA 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 182 RLRPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E VL  +++       +     R+ Y +A+ RYG+DKPDLR    +  +T 
Sbjct: 241 EQDDVIALAEKVLVALWKLVG--YDIPAPIPRMSYAEAMSRYGSDKPDLRFGFELTELTS 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 299 YFADTGFRVFQNP------YVGAVVMPGGASQPRKVLDGWQEWAKQRGARGLAYVL--IG 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G V   GPV K+L+      +   +    GD  FF AG P    +    AR  IA+ +
Sbjct: 351 EDGQVDERGPVVKNLSETERAGLAAAVGANPGDCIFFAAGTPSDARALLGAARGEIARRV 410

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE-------KKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           G I+ + + F WI+D P +E   +              H+ FT P               
Sbjct: 411 GAIDESAWSFVWIVDAPLFESTADTDDVAVGGGAWTALHHAFTSPTPDWIDTFEQSPGEA 470

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+ YD+VCNG EI  G IR H ++V  + F  +G+S+   + +FG L  AF  G PPHG
Sbjct: 471 LAYAYDIVCNGNEIGGGSIRIHDADVQKRVFEIMGLSEAEAKEKFGFLLDAFSYGPPPHG 530

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIA G DRI  LL G  ++REV  FP +    D L  +P+ ++  Q +E G+    
Sbjct: 531 GIAFGWDRITALLAGVDSIREVIAFPKTGGGFDPLTQAPAPITAAQRKEAGVDAKP 586


>gi|148243537|ref|YP_001228694.1| aspartyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|166225439|sp|A5GWT2|SYD_SYNR3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|147851847|emb|CAK29341.1| Aspartyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 604

 Score =  598 bits (1541), Expect = e-168,   Method: Composition-based stats.
 Identities = 214/597 (35%), Positives = 342/597 (57%), Gaps = 16/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+HSCGDL    + S V LSGWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSHSCGDLRSDAIDSTVLLSGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGAEAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           + +R+E VL ++G V +R  E+ N  + TG++E+ AQ++++L+         + V  + +
Sbjct: 62  EHLRNETVLQVEGRVRARPDESRNERLATGEVEVLAQRLKVLNAPSRNLPFAVSVHDDEQ 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR+ + +N+  R + + + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 VREELRLRHRYLDLRRERMRRNLSLRHQTVQTARRFLEDEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLDM
Sbjct: 182 YLVPSRVCGGEWFALPQSPQLFKQLLMVGGLERYYQVARCFRDEDLRADRQP-EFTQLDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q+ IL+  E ++  +++       +S    R+ + +A+ RYGTD+PD R  + +
Sbjct: 241 EMSFLDQEQILDLNERLIGRIWKLVKGVE-LSLPLPRMTWHEAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
             V++      F+VFS  ++     +   +P      +         +   A+  G  GL
Sbjct: 300 VGVSDIVADMGFKVFSGAVAAGGSVKCITVPGGNDKVSNVRIKPGGDVFSEAQKAGAGGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  R+ + G +  +G +  +L+      +  R   + G    F AGD           
Sbjct: 360 AFI--RVRDGGEIDTIGAIKDNLSDEKKAQLLQRTGAEPGSLILFGAGDTATVNKALDRV 417

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM----ESLKGN 472
           R ++A+EL ++    + F W++DFP +E+N +E +++  H+PF            +L   
Sbjct: 418 RQYLAKELEMVPAEAWNFLWVVDFPMFEFNADENRLEALHHPFCAANPEDLGDDPALWSE 477

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            L + +A  YDLV NG E+  G +R H + +  Q    +G+++E  + +FG L  A + G
Sbjct: 478 RLPTARAQAYDLVLNGLELGGGSLRIHDAALQNQVLQTIGLAQEEAQEQFGFLLEALEMG 537

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            PPHGGIA G+DR+VMLL G +++R+   FP +Q    L+  +P   S +QL EL +
Sbjct: 538 APPHGGIAFGLDRMVMLLAGEESIRDTIAFPKTQQARCLMTSAPGGASDKQLEELHV 594


>gi|304440199|ref|ZP_07400089.1| aspartate--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371248|gb|EFM24864.1| aspartate--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 591

 Score =  597 bits (1540), Expect = e-168,   Method: Composition-based stats.
 Identities = 222/592 (37%), Positives = 338/592 (57%), Gaps = 11/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62
           RT   GDL   D+   V L GWV + R  G + F+D+RD  GI Q+V N  PD   FE +
Sbjct: 9   RTDYAGDLREKDIDREVVLMGWVAKERNLGSLNFVDLRDRSGICQIVFNDKPDEELFEKS 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +RSE+V+ + G V  RS  ++N NI TG IE+ A +++IL++++  P+ V  +    E
Sbjct: 69  KKLRSEFVIGVKGKVRKRS--SVNENIPTGYIEVLADELKILNISDVPPIYVKDDDNVSE 126

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R K R LDLR+ ++  N++ R++     R       FIE  TP+LT  +PEGARD+LV
Sbjct: 127 NMRLKNRSLDLRKPSMINNLMVRSKFYKVTRDFFAENGFIEVETPMLTKPTPEGARDYLV 186

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G FYALPQ+PQ  KQLLM SG DRY QI  CFRDED R++R P EF Q+D+EMS
Sbjct: 187 PSRVNPGKFYALPQSPQLLKQLLMVSGLDRYIQITKCFRDEDLRANRQP-EFTQIDLEMS 245

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +D+L+  E  L+  F+E  + +       R+ Y +A+ RYG DKPDLR  + + N+
Sbjct: 246 FVDVEDVLDINEKFLKVAFKEMLDIDI-ELPIKRMKYKEAMERYGIDKPDLRFGMEIQNI 304

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+      F VF +            +       +R    ++ ++ +  G  GL  I   
Sbjct: 305 TDIVKDCGFGVFEQSAKEFNSVRGINVKGGAKAYSRKGISKLEDFVKDFGAKGLVNIKIE 364

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             +S     +  + K L     + I+   + ++GD    ++G          + RN +A+
Sbjct: 365 EGKS-----ITGIDKFLKEGILDKIKKAFNAEEGDLILIVSGKDKVVFDSLGNLRNKVAR 419

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ++ +I+ + FE  WI +FP +E++EEE +    H+PFT P         +D  + +A  Y
Sbjct: 420 DMNLIDDSKFELVWITEFPLFEYSEEENRYVAVHHPFTAPMDEDLDKVESDPANARAKAY 479

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR +  E+  + F  +G ++E  EN+FG L  AF+ G PPHGG+A G
Sbjct: 480 DIVINGDEMGGGSIRINDREIQKKMFKALGFTEEDAENKFGFLLEAFKYGAPPHGGLAYG 539

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+VML   + N+R+V  FP +Q+   LL G+P+ +S EQLRE+ ++ ++ 
Sbjct: 540 LDRLVMLFTNSSNIRDVIAFPKTQSASCLLTGAPTELSEEQLREVHIKPIKE 591


>gi|315608745|ref|ZP_07883723.1| aspartate--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315249595|gb|EFU29606.1| aspartate--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 587

 Score =  597 bits (1540), Expect = e-168,   Method: Composition-based stats.
 Identities = 225/599 (37%), Positives = 336/599 (56%), Gaps = 20/599 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT +CG+L +SD G+ V L+GWV R R  GG+ F+D+RD YGITQ+V N   + A  E
Sbjct: 1   MYRTKTCGELRLSDAGTEVTLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEADNRALCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + + G V  R ++  N N+ TG IE+    + +LS +   P  +    + 
Sbjct: 61  EANKLGREYCVQVKGRVSERQSK--NPNMDTGDIEIIVSALTVLSPSLTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LD+RR  + KN+  R R+   +R  + +  F+E  TPIL  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDIRRAAVRKNLELRHRMTILIRNFLDSRQFMEVETPILIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +G DRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGVDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+LN  E++ R +F+E            R+ + DA+RRYG+DKPD+R  +   
Sbjct: 238 MSFVEQEDVLNIFEDMARHLFKEIRGVELPPL--ERMKWHDAMRRYGSDKPDVRFGMEFV 295

Query: 301 NVTEHFVHSE-FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + E F     F VF +   +                +R   + + ++ +    G  GL 
Sbjct: 296 ELKEAFAGKGAFSVFDEAAYIGG-----ICVPGCADYSRKQLNELTDFVKRPQVGAKGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           +I ++ D          + K  +      I+  +  +DGD    ++GD   K        
Sbjct: 351 FIKYQADG----TVKSSIDKFYSPEVLAEIKQTMGAKDGDLVLILSGDNANKTRVQLCSL 406

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L       
Sbjct: 407 RLEMGDRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDLPLLDEHPEQ 466

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G +R H + +  + F  +G + E  E +FG L  AF+ G PPH
Sbjct: 467 VRAVAYDFVCNGIEVGGGSLRIHDTRLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAPPH 526

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+A G+DR V +L G  ++R+   FP + +  D+++ +P  +  +QL EL L++VE+P
Sbjct: 527 AGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLDAPGPIDQKQLDELQLKLVESP 585


>gi|313837757|gb|EFS75471.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314927362|gb|EFS91193.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314972694|gb|EFT16791.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
 gi|328907447|gb|EGG27213.1| aspartate--tRNA ligase [Propionibacterium sp. P08]
          Length = 606

 Score =  597 bits (1540), Expect = e-168,   Method: Composition-based stats.
 Identities = 231/603 (38%), Positives = 327/603 (54%), Gaps = 25/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKVVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + GLV +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIKLTGLVEARPEGNANPNLPTGEIEVAISELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+++ +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPRQHEALVLRSQVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E  +   ++       +     RI + +A+ RYG+DKPDLR    +  VT+
Sbjct: 242 DQDDVIALAEETMAACWKIIG--VDMPTPIPRITWHEAMDRYGSDKPDLRFSNEIIEVTD 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF         Y    +   G    R   D   EWAR+ G  GLAYI     
Sbjct: 300 FFANTPFRVFQAP------YVGAVVMPGGASLPRRQFDAWQEWARTHGAKGLAYITV--- 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            S      GPVAK+++      I   +  + GD+ FF AG           AR  I +  
Sbjct: 351 -SDEGVPGGPVAKNISDEEKAGIAEVVGAKPGDAIFFAAGPKTSSQELLGAARLEIGRRC 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDL 474
            + N   + FCW++D P ++  +E                 H+ FT P          D 
Sbjct: 410 ELFNPADWAFCWVVDAPLFKPTKEAEASGDVAVGAGAWTAVHHAFTSPTPDCLDTFDTDP 469

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A  YD V NG E+  G IR H  ++  + F+ +GI  E  + +FG L  AF+ G P
Sbjct: 470 GSALAHAYDFVVNGNEVGGGSIRIHRRDIQERVFNVMGIGPEEAQKKFGFLLDAFKFGAP 529

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL G + +R+V  FP + N  D L  +P+ +S  Q RE G  +   
Sbjct: 530 PHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDPLTAAPAPISPAQRREAG--VDAR 587

Query: 595 PKK 597
           PKK
Sbjct: 588 PKK 590


>gi|160915139|ref|ZP_02077352.1| hypothetical protein EUBDOL_01147 [Eubacterium dolichum DSM 3991]
 gi|158432938|gb|EDP11227.1| hypothetical protein EUBDOL_01147 [Eubacterium dolichum DSM 3991]
          Length = 580

 Score =  597 bits (1540), Expect = e-168,   Method: Composition-based stats.
 Identities = 221/587 (37%), Positives = 337/587 (57%), Gaps = 12/587 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G+L +SDV   V L GWV + R  G ++F+D+RD  GITQ+V +  S+  E  K 
Sbjct: 3   RTHTNGELRLSDVNKKVTLLGWVAKRRNFGSLVFIDLRDRSGITQLVFDETSS--EAIKE 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E++L ++G V  R  +  N N+ TG+IE+   K+EI++ A+  PL +  E +  E  
Sbjct: 61  VRNEYILEVEGTVHERKDK--NPNLETGEIEVVVDKVEIINSAKTTPLIIADETDALEDT 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  + K ++ R  I  S+R  +    F+E  TP+L  S+PEGARD+LVPS
Sbjct: 119 RLKYRYLDLRRPIMQKKLLMRHAITKSLRGYLDDHGFVEIETPVLGKSTPEGARDYLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ G FYALPQ+PQ +KQLLM SGF+RY+Q A CFRDED R+DR   +F QLDMEMSF+
Sbjct: 179 RVHPGCFYALPQSPQLFKQLLMISGFERYYQFARCFRDEDLRADRQ-TDFTQLDMEMSFL 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              +I   ME +L  + ++    +     FLR+ Y++A+ RYG+DKPD R  + +  +T+
Sbjct: 238 SDVEIQTMMEEMLAKLMKDVKGLDI-PTPFLRLSYEEAMNRYGSDKPDNRFGMELQEITD 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F    F+VF   ++     +   +P K     R   D++ E A+  G  GL  + +   
Sbjct: 297 IFTDCGFQVFKDCIAKGGSIKAVVVPDK-ADMTRKEIDKITELAKKNGAKGLVTLKYM-- 353

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
              +    G + K L      A++  L +++ D    ++      C+     RNH    L
Sbjct: 354 ---HEEISGSIVKFLTEKELNALKETLALKENDLILIVSDAWETTCNVLGALRNHFGTVL 410

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G+   + F F W+ DFP +E++EE+ +    H+PFT P+         D   + A  YD+
Sbjct: 411 GLKKKDEFSFLWVTDFPMFEYSEEDGRYYAKHHPFTRPKQEDMKYIDEDPSKVHAIAYDV 470

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG+E+  G +R + S++  + F  +G ++E +  RFG    AFQ G PPHGG+A G+D
Sbjct: 471 VLNGYELGGGSLRIYDSKMQEKMFEVMGFTEEQIHERFGFFVDAFQYGTPPHGGLAFGLD 530

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           RI M+L  + ++R+V  FP + N    +  +P+ V  +QL EL ++I
Sbjct: 531 RIAMILSESDSIRDVIAFPKNANAKCPMSDAPTPVDPQQLEELHIKI 577


>gi|289669606|ref|ZP_06490681.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 588

 Score =  597 bits (1540), Expect = e-168,   Method: Composition-based stats.
 Identities = 223/596 (37%), Positives = 335/596 (56%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + TG++E+ A +I IL+ A    LP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRTGKVEVIATRISILNKAAP--LPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E ++R +F+E  + + ++  F R+ + +A+RR+G+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEVMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRFGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V E    SEF VF+   +   G         G G +R   D     A   G  GLAY
Sbjct: 296 LVDVAELVKSSEFPVFTAAANDVDGRVAALRIPGGAGLSRKQIDEYAAHAAKYGAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +L E+G V+   P+AK  +     A+   +   +GD  FF AG   K   F    R 
Sbjct: 356 I--KLSETGEVS--SPIAKFFSEEAFAALIKHVGAGNGDIVFFGAGGYTKVSDFMGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +E  ++  + +   W+ DFP +EW++E ++    H+PFT P     +    +     
Sbjct: 412 KAGKEFNLL-ADGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARIAV 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGG
Sbjct: 471 SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   
Sbjct: 531 IAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQVRPK 586


>gi|258647273|ref|ZP_05734742.1| aspartate--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260852926|gb|EEX72795.1| aspartate--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 590

 Score =  597 bits (1540), Expect = e-168,   Method: Composition-based stats.
 Identities = 227/600 (37%), Positives = 344/600 (57%), Gaps = 18/600 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT +CG+L +++VG  V L+GWV R+R  GG+ F+D+RD YGITQ+V N   D+A  E
Sbjct: 1   MYRTKTCGELRLANVGEQVVLAGWVQRLRKMGGMTFVDLRDRYGITQLVFNTETDAALCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+VL + G V  R ++  N  I TG IE+   ++ +L+ +   P  +  E + 
Sbjct: 61  RANQLGREYVLQVTGSVNERFSK--NDKIPTGDIEVIVNELVVLNESLTPPFIIEDETDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYRFLDLRR+ + +N+  R ++   +R  +  + F+E  TP L  S+PEGARDF
Sbjct: 119 GDDLRMKYRFLDLRRNCVRRNMELRHKMTLEVRRFLDEKGFLEIETPALIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +G DRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGCFYALPQSPQTLKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD++NT E + + +F+     +     FLR+ + +A+RR+G+DKPD+R  +   
Sbjct: 238 MSFVEQDDVINTFEEMTKYLFKSVRGVDLGEEPFLRLSWAEAMRRFGSDKPDMRFGMEFV 297

Query: 301 NVTEHFVHSE-FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + +    +  F VF++ + +                 R   D + ++ R    G  GL 
Sbjct: 298 ELMDQLKGTGTFGVFNEAVYIGG-----ICVPGCAVYTRKQLDELTDFVRSPQIGAKGLV 352

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADA 416
           Y   R+ E G+V     V K  +      ++ ++  + GD    I+G D  K      + 
Sbjct: 353 YA--RVQEDGSVK--SSVDKFYDAAVLNGLKDKMQARPGDLILIISGPDTQKARKQLCEL 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L  +    
Sbjct: 409 RLLMGGRLGLRDKNKFALLWVVDFPMFEWSEEESRLMAMHHPFTAPKPEDVGLLDSAPER 468

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           + A  YD+VCNG E+  G IR H +E+  + F  +G ++E  + +FG L  AF+ G PPH
Sbjct: 469 VCANAYDMVCNGVEVGGGSIRIHDAELQAKIFKALGFTQESAQEQFGFLMNAFKYGAPPH 528

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR V +  G  ++R+   FP + N  D+++ +PSTV  +QL EL + +    K
Sbjct: 529 GGLAYGLDRWVSIFAGLDSIRDCIAFPKNNNGRDVMLDAPSTVDQKQLDELHIALQPIEK 588


>gi|256845828|ref|ZP_05551286.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256719387|gb|EEU32942.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 592

 Score =  597 bits (1540), Expect = e-168,   Method: Composition-based stats.
 Identities = 226/599 (37%), Positives = 342/599 (57%), Gaps = 16/599 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+ G+L + ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLGELRLKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NLNIPTGEIEVFAKEIEILNACDTLPFQISGVDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  +     +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVTGEE-ANYTFQRMPYAEAMDRFGSDKPDLRFEVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P      +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKIISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI    D         P+AK L+    +AI  +   + GD  F +A       S     R
Sbjct: 359 YIKLTAD-----GITSPIAKFLSEDEMKAIIEKTQAKTGDVIFIVADKKKVVVSALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLS 476
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT  +              
Sbjct: 414 LKIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFTSIKAEDLDKFLAGQTED 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I+   YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF+ G PPH
Sbjct: 474 IRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFGFFLDAFKYGAPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL ++     
Sbjct: 534 GGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFIKSTYEK 592


>gi|260494401|ref|ZP_05814532.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260198547|gb|EEW96063.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 592

 Score =  597 bits (1540), Expect = e-168,   Method: Composition-based stats.
 Identities = 226/599 (37%), Positives = 342/599 (57%), Gaps = 16/599 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+ G+L + ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLGELRLKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NLNIPTGEIEVFAKEIEILNACDTLPFQISGVDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  +     +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVTGEE-ANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P      +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKIISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI    D         P+AK L+    +AI  +   + GD  F +A       S     R
Sbjct: 359 YIKLTAD-----GITSPIAKFLSENEMKAIIEKTQAKTGDVIFIVADKKKVVVSALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLS 476
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT  +              
Sbjct: 414 LKIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFTSIKAEDLDKFLAGQTED 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I+   YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF+ G PPH
Sbjct: 474 IRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFGFFLDAFKYGAPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL ++     
Sbjct: 534 GGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDKKQLEELFIKSTYEK 592


>gi|71911626|ref|YP_283176.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|71854408|gb|AAZ52431.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 582

 Score =  597 bits (1540), Expect = e-168,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 345/595 (57%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACF 59
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+       
Sbjct: 1   MKRSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSNVM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +RSE+V+ ++G V +R     N  + TG +EL    + IL+ A+  P  +  + E
Sbjct: 61  ATAERLRSEYVIEVEGFVEARQ--QANDKLATGMVELKVSALTILNTAKTTPFEIKDDVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T     ++F+VFS+     P  +   +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTVTVKGNDFKVFSEA----PAVKAIVVKGNADRYSRKDIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G +A  GPVAK L  + TE +  +L + + D   F+A       +     RN 
Sbjct: 353 KVT---DGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVADTLEVANNTLGALRNR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I  +
Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQIESH 581


>gi|72162485|ref|YP_290142.1| aspartyl-tRNA synthetase [Thermobifida fusca YX]
 gi|97196980|sp|Q47N50|SYD_THEFY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71916217|gb|AAZ56119.1| aspartyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 579

 Score =  597 bits (1540), Expect = e-168,   Method: Composition-based stats.
 Identities = 238/590 (40%), Positives = 332/590 (56%), Gaps = 17/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L        V L+GWV R R HGG++FLD+RD  GI QVV   D    E+A  
Sbjct: 3   RTHEAGTLRADHAEQNVVLAGWVARRRDHGGVVFLDLRDASGIVQVVVRED----ELAHD 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + + G V  R     N +I TG+IE+ A  IE+LS +  LP P+ G +E  E  
Sbjct: 59  LRSEYCIKVTGTVRIRPEGNENPDIATGEIEVVASHIEVLSESAPLPFPLDGNQEISEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LD+RR    + +  R+R        M    F+   TP LT S+PEGARDFLVP 
Sbjct: 119 RLRYRYLDMRRPETAEALRVRSRATYIAHEVMNDNGFVYVETPYLTRSTPEGARDFLVPV 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM  G +RY+Q+  CFRDED R+DR P EF Q+D+EMSFV
Sbjct: 179 RLQPGHWYALPQSPQLFKQLLMVGGMERYYQLTRCFRDEDFRADRQP-EFTQIDIEMSFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D+ +  E +   +  E      +   F R+ + +A+ R+GTDKPDLR    +  +T+
Sbjct: 238 DEEDLFDIGEKLFTRLLREVRGVE-LPRPFRRMKFAEAMDRFGTDKPDLRFGQELVELTD 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F ++ FRVF         Y    +   G    R   D   EWARS+G  GLAY+     
Sbjct: 297 FFANTPFRVFQAP------YVGAVVMPGGASQTRRELDAWQEWARSRGAKGLAYVLVH-- 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L+      +  R+  + GD+ FF AG+          AR  I +  
Sbjct: 349 EDGTLG--GPVAKNLSEEERAGLAERVGAKPGDAIFFSAGERTASQELLGAARLEIGKRC 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G+I+ + +E  WI D P +E + +E      H+PFT P   +     ND  S  A  +DL
Sbjct: 407 GLIDESAWEVLWITDMPMFEKD-DEGGWTSVHHPFTAPAQEVADTFHNDPGSATARAFDL 465

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG+E+ASG IR H +E+  + F  +G+SK+  E +FG L  AFQ G PPHGG+A G D
Sbjct: 466 VMNGYELASGSIRIHRAEMQQRVFDTIGLSKDEAETKFGFLLEAFQFGPPPHGGLAVGWD 525

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           R+VMLL G   +R+V  FP + +  D L G+P+ ++ EQ RE G+  V  
Sbjct: 526 RLVMLLAGQSTIRDVIAFPKTASGADPLTGAPTPITAEQRREAGVDAVPE 575


>gi|325281473|ref|YP_004254015.1| aspartyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324313282|gb|ADY33835.1| aspartyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 581

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 225/594 (37%), Positives = 336/594 (56%), Gaps = 20/594 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YRTH+CG L + +V   V LSGWV ++R  G + F+D+RD YGITQ+VA  +SA  EI 
Sbjct: 1   MYRTHTCGALRIENVNENVCLSGWVQKIRNLGAMTFIDLRDRYGITQLVAE-ESASEEIK 59

Query: 63  KSVR---SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           K V     E+V+ I G V+ R+++  N  I TG+IE+    ++ILS +E  P  +    +
Sbjct: 60  KQVAQLGREFVIQIQGKVVERASK--NNKIPTGEIEIILDTVKILSRSEIPPFTIEDNTD 117

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + IR KYR+LDLRR  + +N+  R R+ + +R  +  + F+E  TP+L  S+PEGARD
Sbjct: 118 GGDEIRMKYRYLDLRRQMVRRNLELRHRMAHLVRNFLDGKQFMEVETPVLIKSTPEGARD 177

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+NQG FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D 
Sbjct: 178 FVVPSRMNQGQFYALPQSPQTFKQLLMVAGFDRYYQIVKCFRDEDLRADRQP-EFTQIDC 236

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVE++D+L   E+++R +F+E    +  +  F R+ + +A+ +YG DKPD+R  +  
Sbjct: 237 EMSFVEREDVLGIFEDMIRHLFKEIRGIDIPA--FPRMTWHEAMEQYGCDKPDIRFGMKF 294

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            ++T      +F VF+    +                 R   D + ++ +    G  GL 
Sbjct: 295 ADLTRLARTKDFAVFNSAEYIGG-----ICVPGCASYTRKQLDELTDFVKRPQVGAKGLV 349

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+ +  D     +    V K       +        Q GD    + G   K      + R
Sbjct: 350 YVKYNEDG----SIKSSVDKFYTAEELKVWLDTCQAQPGDLLLILCGAKNKTLPQLCELR 405

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +   LG+ + N F+  WI+DFP  EW+EE ++    H+PFT P      L       +
Sbjct: 406 LEMGNRLGLRDKNVFKPLWIVDFPLLEWDEETQRFYAMHHPFTSPNPEDIDLMETRPGDV 465

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H + +  + F  +G + E  E +FG L  AF+ G PPHG
Sbjct: 466 RANAYDMVINGVEVGGGSIRIHDTALQQRMFKCLGFTPEQAEKQFGFLLNAFKYGAPPHG 525

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G DR+V +  G  ++R+   FP + +  D+++ SPS +SVEQ +ELG+++
Sbjct: 526 GIAFGFDRLVSMFAGLDSIRDTIAFPKNNSGRDVMIDSPSEISVEQFKELGIKL 579


>gi|148240794|ref|YP_001226181.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|166225438|sp|A5GPL9|SYD_SYNPW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|147849333|emb|CAK24884.1| Aspartyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 611

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 217/601 (36%), Positives = 340/601 (56%), Gaps = 20/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL    + + V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSNGCGDLRKEHIDNSVQLCGWVDRRRDHGGVIFIDLRDRTGTVQITVDPDLGAEAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           + +RSE VL I G V +R AE++N  + TG +E+ A  I +L+  +     P+ V  E  
Sbjct: 62  EHLRSETVLQISGKVRARPAESLNEKLATGAVEVLASGITVLNSVKGNLPFPVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR  ++ N+  R + I + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAQTIQAARRFLEDEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YVLPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q++IL   E+++  +++     + +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQEEILQLNESLICSIWKAVKGID-LPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
            NV++      F+VFS  +      +  A+P      +         +   A+  G  GL
Sbjct: 300 TNVSDIVKDMGFKVFSGAVKNGGAVKCIAVPGGNEALSNVRIKPGGDVFSEAQKAGAGGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  R+ + G +  +G +  +L+    + +  R   + G    F AGD           
Sbjct: 360 AFI--RVRDGGEIDTIGAIKDNLSDEQKQELLSRTGAEPGTLLLFGAGDTATVNKALDRV 417

Query: 417 RNHIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
           R ++A+ELG++    + + + F W++DFP +E+N +E + +  H+PF  P         +
Sbjct: 418 RQYLAKELGMVKADRDNDQWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNAEDLGSDAS 477

Query: 473 DLL----SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
                    +A  YDLV NG E+  G +R H S +  Q    VG+  E  + +FG L  A
Sbjct: 478 QWADTLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQEQFGFLMDA 537

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
              G PPHGG+A G+DR+VMLL G +++R+   FP +Q    L+  +P  V+ +QL EL 
Sbjct: 538 LDVGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFPKTQQARCLMTNAPGGVADKQLEELH 597

Query: 589 L 589
           +
Sbjct: 598 V 598


>gi|325269911|ref|ZP_08136521.1| aspartate--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324987884|gb|EGC19857.1| aspartate--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 585

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 220/595 (36%), Positives = 339/595 (56%), Gaps = 20/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT++CG+L +SD G  V LSGWV R R  GG+ FLD+RD YGITQ+V N   D+A   
Sbjct: 1   MYRTNTCGELRISDAGKEVTLSGWVQRSRKMGGMTFLDLRDRYGITQLVFNEADDAALCG 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + + G V  R ++  N+ I TG IE+ A+++++LS +   P  +    + 
Sbjct: 61  EANKLGREYCIQVKGTVSERQSK--NSKIPTGDIEIIAKELKVLSPSLTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR+ + KN+  R R+   +R  + A+ FIE  TP+L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRREAVRKNLELRHRMTILIRNFLDAQQFIEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++N  E + R +F E            ++ + +A++R+G+DKPDLR  +   
Sbjct: 238 MSFVDQDDVINLFEEMARHLFREIRGVELPRL--EQMTWHEAMKRFGSDKPDLRFGMEFV 295

Query: 301 NVTEHFVHSE-FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + +    +  F VF++   +        +       +R   + + ++ +    G  GL 
Sbjct: 296 ELMDDLKGTGTFSVFNEADYIGG-----IVVPGCADYSRKQLNELTDFVKRPQVGAQGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           +I +  D          + K       + ++     +DGD    ++GD   K        
Sbjct: 351 FIKYNADG----TAKSSIDKFYTPGQLQKVKETTGAKDGDLVLILSGDNANKTRVQLCSL 406

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + N F   WI+DFP +EW++EE+++   H+PFTMP      L       
Sbjct: 407 RLEMGNRLGLRDRNVFRCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPEQ 466

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G +R H +++  + F  +G + E  E +FG L  AF+ G PPH
Sbjct: 467 VRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAPPH 526

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR V +L G  ++R+   FP + +  D+++ +PS++  +QL EL +++
Sbjct: 527 AGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLEAPSSIDQKQLDELEIKL 581


>gi|25028308|ref|NP_738362.1| aspartyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259507366|ref|ZP_05750266.1| aspartate--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|23493592|dbj|BAC18562.1| putative aspartyl-tRNA synthetase [Corynebacterium efficiens
           YS-314]
 gi|259165077|gb|EEW49631.1| aspartate--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 617

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 239/622 (38%), Positives = 333/622 (53%), Gaps = 34/622 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +H  RTH  G+L   + G  V L+GWV R R HGG+IF+D+RD  GI QVV   +    E
Sbjct: 16  LHVLRTHLSGELRKENAGQSVTLTGWVARRRDHGGVIFIDLRDRSGIAQVVFRNEDVA-E 74

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--- 117
            A ++RSE+VL + G+V  R   + N N+ +G +E+S     +L+ +  LP  +      
Sbjct: 75  RAHALRSEFVLQVTGVVEKRPEGSENPNLASGDVEVSVTDFTVLNESAPLPFQIEDASSA 134

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            E  E  R KYR+LDLRR      +  R+    + R  + + +F E  TP LT S+PEGA
Sbjct: 135 GEVGEETRLKYRYLDLRRPVQANALRLRSAANKAARTVLDSHDFTEIETPTLTRSTPEGA 194

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RDFLVP+R+  G+FYALPQ+PQ +KQLL  +G +RY+QIA C+RDED R+DR P EF QL
Sbjct: 195 RDFLVPARLKPGTFYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQP-EFTQL 253

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV+Q+D++   E +L  V++       +S    RI Y DA+R YG+DKPDLR  I
Sbjct: 254 DVEMSFVDQEDVIALAEEILTEVWKLIG--YEISTPIPRITYADAMRLYGSDKPDLRFDI 311

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            +   T+ F  + FRVF         Y    +   G    R   D   EWA+ +G  GLA
Sbjct: 312 QITECTDFFADTTFRVFKN------EYVGAVVMKGGASQPRRQLDAWQEWAKQRGAKGLA 365

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI   + E G +   GPVAK++     E I   +  + GD  FF AGD     +    AR
Sbjct: 366 YIL--VGEDGELG--GPVAKNITDAEREGIAAHVGAEPGDCIFFAAGDTRSSRALLGAAR 421

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGME 467
           + IA++L +I    + F W++D P +E   +            K    H+ FT P+    
Sbjct: 422 DEIARKLDLIRDGEWSFVWVVDAPMFESAADATASGDVALGNSKWTAVHHAFTSPKPEFL 481

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                +     A+ YD+VCNG EI  G IR H  +V  + F  +GIS+E   ++FG L  
Sbjct: 482 DTFDENPGEALAYAYDIVCNGNEIGGGSIRIHQRDVQERVFKVMGISEEEARDKFGFLLD 541

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF  G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ ++  Q +E 
Sbjct: 542 AFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPITPLQRKES 601

Query: 588 GLRIVENPKKILKISVTTILRN 609
           G+     PK     +       
Sbjct: 602 GID--AKPK-----AAENKPEE 616


>gi|319956652|ref|YP_004167915.1| aspartate--tRNA(asn) ligase [Nitratifractor salsuginis DSM 16511]
 gi|319419056|gb|ADV46166.1| aspartate--tRNA(Asn) ligase [Nitratifractor salsuginis DSM 16511]
          Length = 592

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 231/596 (38%), Positives = 337/596 (56%), Gaps = 14/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTH C ++    +G  V ++GWV   R HGG+IF+D+RD   I Q+V +P       +IA
Sbjct: 2   RTHYCEEITEDLIGQEVTVAGWVASRRDHGGVIFIDLRDKDEIVQLVCDPADSEEAHKIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR ++V+   G V  R     N N+ TG++E+   +++I + ++ +P  +  ER   E
Sbjct: 62  DQVRDQYVIVATGKVRPRGEGLENPNLKTGKVEIVVSELKIENTSKPMPFDLGDER-VNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLR   +HK    R++   + R  +    F+E  TP+LT S+PEGARD+LV
Sbjct: 121 EIRLKYRYLDLRTPKMHKIFRLRSQAAIAARNSLAEMGFMEVETPVLTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVWPGEFYALPQSPQLFKQLLMISGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +Q+ ++   E ++R ++        +   F R+ YD+A+ +YG+DKPDLR  + M +V
Sbjct: 240 FCDQEKVIEVAERLIRDIWAACDQWEKLPAQFPRMSYDEAMEKYGSDKPDLRFGLEMVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F   +  +FS I        + A+    G    ++        + R  G  GL Y  
Sbjct: 300 IDIFERCDNEIFSTIAKSPKKNRIKALKVPNGDNIFSKRQMKGFESYVRKFGAQGLGYFQ 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +          GP+ K     + +AI  R D++ GD  FF AG+      +    R ++
Sbjct: 360 MK-----EEGLKGPLTKFFTEEDLQAIIDRCDLKVGDVVFFGAGEKKVVLDYMGRFRLYL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKA 479
           A+ + II    F+F WI+DFP +E   EE K+   H+PFTMP+      L   ++  +K+
Sbjct: 415 AEIMEIIPEGEFKFVWIVDFPMFEV--EEGKLKALHHPFTMPKLNEKGGLDYEEIEDLKS 472

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG E+  G IR H  E+  + F  +GIS E  + +FG L  A + G PPHGG 
Sbjct: 473 VAYDLVLNGTELGGGSIRIHKPEIQKEVFKLLGISDEEAKEKFGFLLEALEFGAPPHGGF 532

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G DR++MLL G +++R+V  FP +Q    LL  +PS V  EQL+EL +R+ + P
Sbjct: 533 AMGFDRMIMLLAGTESIRDVIAFPKTQRAQCLLTQAPSPVDPEQLKELHIRLRQRP 588


>gi|46577271|sp|Q8FT19|SYD_COREF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 600

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 238/618 (38%), Positives = 331/618 (53%), Gaps = 34/618 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L   + G  V L+GWV R R HGG+IF+D+RD  GI QVV   +    E A +
Sbjct: 3   RTHLSGELRKENAGQSVTLTGWVARRRDHGGVIFIDLRDRSGIAQVVFRNEDVA-ERAHA 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYP 121
           +RSE+VL + G+V  R   + N N+ +G +E+S     +L+ +  LP  +       E  
Sbjct: 62  LRSEFVLQVTGVVEKRPEGSENPNLASGDVEVSVTDFTVLNESAPLPFQIEDASSAGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR      +  R+    + R  + + +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRPVQANALRLRSAANKAARTVLDSHDFTEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G+FYALPQ+PQ +KQLL  +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLKPGTFYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E +L  V++       +S    RI Y DA+R YG+DKPDLR  I +  
Sbjct: 241 SFVDQEDVIALAEEILTEVWKLIG--YEISTPIPRITYADAMRLYGSDKPDLRFDIQITE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            T+ F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAYI  
Sbjct: 299 CTDFFADTTFRVFKN------EYVGAVVMKGGASQPRRQLDAWQEWAKQRGAKGLAYIL- 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G +   GPVAK++     E I   +  + GD  FF AGD     +    AR+ IA
Sbjct: 352 -VGEDGELG--GPVAKNITDAEREGIAAHVGAEPGDCIFFAAGDTRSSRALLGAARDEIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKG 471
           ++L +I    + F W++D P +E   +            K    H+ FT P+        
Sbjct: 409 RKLDLIRDGEWSFVWVVDAPMFESAADATASGDVALGNSKWTAVHHAFTSPKPEFLDTFD 468

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            +     A+ YD+VCNG EI  G IR H  +V  + F  +GIS+E   ++FG L  AF  
Sbjct: 469 ENPGEALAYAYDIVCNGNEIGGGSIRIHQRDVQERVFKVMGISEEEARDKFGFLLDAFAF 528

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ ++  Q +E G+  
Sbjct: 529 GAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPITPLQRKESGID- 587

Query: 592 VENPKKILKISVTTILRN 609
              PK     +       
Sbjct: 588 -AKPK-----AAENKPEE 599


>gi|19746997|ref|NP_608133.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|56808428|ref|ZP_00366176.1| COG0173: Aspartyl-tRNA synthetase [Streptococcus pyogenes M49 591]
 gi|209560239|ref|YP_002286711.1| aspartyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|24212398|sp|Q8NZ20|SYD_STRP8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238064673|sp|B5XJ82|SYD_STRPZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|19749253|gb|AAL98632.1| putative aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|209541440|gb|ACI62016.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 582

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 346/595 (58%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++ 
Sbjct: 1   MKRSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +RSE+V+ ++G V +R     N  + TG +EL    + IL+ A+  P  +  + E
Sbjct: 61  ATAERLRSEYVIEVEGFVEARQ--QANDKLATGMVELKVSALTILNTAKTTPFEIKDDVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T      +F+VFS+     P  +   +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTVTVKGIDFKVFSEA----PAVKAIVVKGNADRYSRKDIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G +A  GPVAK L  + TE +  +L + + D   F+A       +     RN 
Sbjct: 353 KVT---DGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVADTLEVANNTLGALRNR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I  +
Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQIESH 581


>gi|228470504|ref|ZP_04055371.1| aspartyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228307800|gb|EEK16756.1| aspartyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 580

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 230/593 (38%), Positives = 337/593 (56%), Gaps = 17/593 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YRTH+CG L  SD G  V L+GWV ++R  G + FLD+RD YGITQ+  +       + 
Sbjct: 1   MYRTHTCGALRASDEGQQVTLAGWVAKIRRMGAMTFLDLRDRYGITQIFFDESHQA--LL 58

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             V  EWVL + G V  RS  ++N  I TGQIE+ A+ +++L+ A+  P  +    +  +
Sbjct: 59  SEVGREWVLAVTGTVRLRS--SVNEKIPTGQIEILAESMKVLNRADTPPFTIEDVSDGGD 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +  NI  R R+    R  +   +F+E  TP+L  S+PEGARDF+V
Sbjct: 117 DLRMKYRYLDLRRRPVLSNIELRHRMTMETRRYLDGLHFLEIETPMLIGSTPEGARDFVV 176

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM +G DRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 177 PSRMNPGQFYALPQSPQTFKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 235

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDDIL+T E + + +F+E    + +     R+ + +A+ RYG+DKPDLR  + +  V
Sbjct: 236 FVEQDDILSTFEGLAKHLFKEIRGID-LPTPLRRMTWYEAMDRYGSDKPDLRFGMEIEEV 294

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAYIF 360
           T+      F V      +        +        R   D++ ++ +    G  GL ++ 
Sbjct: 295 TKTIQGHGFGVVDDAEYIG-----AIVVTGKADYTRKQIDQLTDFVKRPQVGAKGLLWLR 349

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           ++ D            K L     +A+  +L MQ GD  F I+G            R H+
Sbjct: 350 YQADG----TMKSSFDKFLTADQLKALADQLSMQPGDIAFLISGGKRTAQKQLGTLRLHV 405

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ELG++    +E  W++DFP  EW+EE ++    H+PFT P+   +    +D  S++A 
Sbjct: 406 ASELGLMKPGHYECLWVVDFPLLEWDEETQRYYAMHHPFTAPKPEDQDRLESDPGSVRAD 465

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +E+  + F+ +G +KE  E +FG L  AF+ G PPHGGIA
Sbjct: 466 AYDMVINGVEVGGGSIRIHDAELQARVFAALGFTKERAEEQFGFLMNAFKYGAPPHGGIA 525

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR V L+    ++R+   FP + +  D+++ +P+ +  EQL EL L + E
Sbjct: 526 FGLDRWVSLMAELDSIRDCIAFPKNNSGRDVMIDAPARLDPEQLDELHLTVRE 578


>gi|237736639|ref|ZP_04567120.1| aspartyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229420501|gb|EEO35548.1| aspartyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 598

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 233/603 (38%), Positives = 341/603 (56%), Gaps = 14/603 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           YRTH+ G+L   ++G  V LSGWV   R  GG+ F+D+RD  G TQVV + D       E
Sbjct: 3   YRTHNLGELRKENIGQTVTLSGWVDTTRDLGGLTFVDLRDREGKTQVVFDIDVAPKDVVE 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +R+E V+ + G V  R ++  N NI TG+IE+ A ++ IL+  + LP  + G  + 
Sbjct: 63  QAQKLRNEAVIRVVGTVRERHSK--NMNIPTGEIEVFATELTILNNCDVLPFQITGTEDN 120

Query: 121 -PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+IR KYR+LD+RR  +  N+  R ++I ++R  M  E FI+  TP+L  S+PEGARD
Sbjct: 121 LNENIRLKYRYLDIRRPKMLNNLRMRHKMIMAIRNYMDKEGFIDVDTPLLNKSTPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP R+N G+FYALPQ+PQ +KQLLM +G +RYFQIA CFRDED R+DR   EF QLD+
Sbjct: 181 FLVPCRINPGTFYALPQSPQLFKQLLMIAGVERYFQIAKCFRDEDLRADRQ-FEFTQLDV 239

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVE DD++NT+E + + VF   +        F R+ Y +A+ R+G+DKPD+R  + +
Sbjct: 240 EMSFVEMDDVMNTIEGLAKNVFTAITG-EVADYKFPRMPYAEAMARFGSDKPDVRFGVEL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAY 358
            ++TE   +  F+ F  +       +    P      +R       E A+   G  G+AY
Sbjct: 299 KDLTEIAKNCGFKAFKDVADNGGIIKCITAPKAFEKFSRKVLGEYEEHAKRYFGAKGMAY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I    D +       P+AK  +    +AI  + +   GD    IA             R 
Sbjct: 359 IKIAEDGA----ITSPIAKFFSEEEMKAIIAKAEANPGDVILIIADKAKVVYGALGAMRL 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSI 477
            I +EL +IN + F+F W++DFP + ++EEE +    H+PFT  +   MES  G     I
Sbjct: 415 RIGKELDLINNDEFKFLWVVDFPMFTYDEEEGRYKAEHHPFTSIKAEDMESFLGGQTEGI 474

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +   YD+V NGFEI  G IR    E+  + F  +G+S E    +FG    AF+ G PPHG
Sbjct: 475 RTNTYDMVLNGFEIGGGSIRIFNPEIQNKVFERLGLSYEEAREKFGFFVDAFKYGAPPHG 534

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+A GIDR +M++L   ++REV  FP +     L+  +P+ V  EQL EL + +    ++
Sbjct: 535 GLAFGIDRWLMVMLKEASIREVIPFPKTNKGQCLMSEAPNFVDKEQLDELNIAVTYKEEE 594

Query: 598 ILK 600
            ++
Sbjct: 595 KIE 597


>gi|15895537|ref|NP_348886.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|24212414|sp|Q97GU6|SYD_CLOAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|15025273|gb|AAK80226.1|AE007728_5 Aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325509685|gb|ADZ21321.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 595

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 227/597 (38%), Positives = 341/597 (57%), Gaps = 13/597 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG++  + +G+ V + GWV R R  GG++F+D+RD  GI QVV     +   F  
Sbjct: 9   KRTIMCGEIRENHIGNRVVVMGWVQRKRNLGGLVFVDLRDREGILQVVFGEEINKDAFMK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  V+SE+ + + G ++ R  E+ N N+ TG +EL  ++I+ILS +E  P+ +    +  
Sbjct: 69  ADLVKSEYCISVSGTLVKR--ESPNPNMPTGMVELKGEEIKILSESETPPIYIKENLDAA 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR +YR+LDLRR  + K    R +    +R  M  ENF+E  TPILT S+PEGARD+L
Sbjct: 127 ENIRLRYRYLDLRRPDMQKIFKIRHKTTKIIRDFMDEENFLEMETPILTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQ+PQ +KQLLM SG+D+YFQIA CFRDED R++R P EF Q+DMEM
Sbjct: 187 VPSRNYNGKFYALPQSPQLFKQLLMVSGYDKYFQIAKCFRDEDLRANRQP-EFTQVDMEM 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE+DD++   E +++ VF+E +    V     R+ +  A+ +YG+DKPDLR  + +++
Sbjct: 246 SFVEEDDVIELNERLIQKVFKEMAGVE-VKLPIERMTWKTAMEKYGSDKPDLRFGMEIND 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E    S+F+VF   +           P       R   D++ E+ ++    GLA+I  
Sbjct: 305 ISEAVSTSDFKVFKSAIEEGGSVRAIKAP-NSADMPRKKIDKLGEFVKTYKAKGLAWIAL 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D         P+AK L     +AI  ++  + GD    +A             R  IA
Sbjct: 364 KED-----GIKSPIAKFLKEEELKAIIDKVQGKTGDLILIVADKNSVVFQSLGALRLEIA 418

Query: 422 QELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           +EL I+  N  F F WI +FP   +NEEE++    H+PFTMP         +D   ++A 
Sbjct: 419 KELEILKDNKEFRFVWITEFPLLSYNEEEERFQAEHHPFTMPMDEDIEYLESDPGRVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G +R H + +  + F  +G +KE    RF  L  AF+ G PPH G+A
Sbjct: 479 AYDIVLNGEELGGGSVRIHDTALQERMFKVLGFTKESAWERFSFLLEAFKFGPPPHAGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR++M L G +N+++V  FP +QN    L  +P+ V   Q+ ELG+++    ++
Sbjct: 539 YGLDRLIMFLAGTENIKDVIAFPKNQNAFCPLTEAPNVVDENQIEELGIKVESKEEE 595


>gi|254302704|ref|ZP_04970062.1| aspartate--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322896|gb|EDK88146.1| aspartate--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 592

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 225/599 (37%), Positives = 343/599 (57%), Gaps = 16/599 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+ G+L   ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLGELRSKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIKVIGEVKERSNK--NPNIPTGEIEVFAKEIEILNACDTLPFQISGIDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR+ +  N+  R ++I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRNKMLNNLKMRHKMIMSIRNYMDNAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  +     +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVTGEE-ANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P      +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKVISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI    D         P+AK L+    +AI  + + + GD  F +A       S     R
Sbjct: 359 YIKLTAD-----GITSPIAKFLSEDEMKAIIDKTEARTGDVIFIVADKKKVVHSALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLS 476
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT  +              
Sbjct: 414 LRIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFTSIKAEDLDKFLAGQTED 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I+   YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF+ G PPH
Sbjct: 474 IRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFLDAFKYGAPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL ++     
Sbjct: 534 GGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFIKSTYEK 592


>gi|33866956|ref|NP_898515.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|46577185|sp|Q7U3K6|SYD_SYNPX RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33639557|emb|CAE08941.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetases, class I
           [Synechococcus sp. WH 8102]
          Length = 610

 Score =  597 bits (1538), Expect = e-168,   Method: Composition-based stats.
 Identities = 216/601 (35%), Positives = 338/601 (56%), Gaps = 20/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL   ++   V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSNGCGDLREQNIDQQVQLCGWVDRRRDHGGVIFIDLRDRSGTVQIKVDPDLGAEAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           + +RSE VL + G V +R  E++N  + TG +E+ A  I +L+  +     P+ V  E  
Sbjct: 62  EHLRSETVLQVAGKVRARPGESLNDKLATGAVEVLASGIIVLNNVKGNLPFPVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR  ++ N+  R + I + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAQTIQAARRFLEDEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YVLPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q++IL   E+++  +++     + +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQEEILQLNESLICSIWKAVKGID-LPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
            NV++      F+VFS  +      +  A+P      +         +   A+  G  GL
Sbjct: 300 TNVSDIVKDMGFKVFSGAVKSGGAVKCIAVPGGNDALSNVRIKPGGDVFSEAQKAGAGGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  R+     +  +G +  +L+    + +  R   + G    F AGD           
Sbjct: 360 AFI--RVRNGCEIDSIGAIKDNLSDEQKQELLSRTGAEPGTLLLFGAGDTATVNKALDRV 417

Query: 417 RNHIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
           R ++A+ELG++    + + + F W++DFP +E+N EE + +  H+PF  P     S   +
Sbjct: 418 RQYLAKELGMVKADQDNDQWNFLWVVDFPMFEFNSEENRYEALHHPFCAPNAEDLSSDAS 477

Query: 473 DLL----SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
                    +A  YDLV NG E+  G +R H S +  Q    VG+  E  + +FG L  A
Sbjct: 478 QWADTLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQEQFGFLMDA 537

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
              G PPHGG+A G+DR+VMLL G +++R+   FP +Q    L+  +P  V+ +QL EL 
Sbjct: 538 LDVGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFPKTQQARCLMTNAPGGVADKQLEELH 597

Query: 589 L 589
           +
Sbjct: 598 V 598


>gi|256391561|ref|YP_003113125.1| aspartyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256357787|gb|ACU71284.1| aspartyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 586

 Score =  597 bits (1538), Expect = e-168,   Method: Composition-based stats.
 Identities = 231/599 (38%), Positives = 332/599 (55%), Gaps = 21/599 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD G+ V L+GWV R R HGG+ FLD+RD  G  QVV        E    
Sbjct: 3   RTHEAGTLRASDAGTTVTLAGWVARRRDHGGVTFLDLRDASGFVQVVVRES----ESVHD 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--E 122
           +R+E+ +   G V  R     N ++ TG IE+    +E+LS A  LP P+   +     E
Sbjct: 59  LRNEYCVVATGEVRVRPEGNENPDLPTGAIEVVVDTVEVLSPAAPLPFPIDEHKSSNINE 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LD+RR+ + + +  R++    +R  M    F++  TP LT S+PEGARDFLV
Sbjct: 119 EMRLKYRYLDIRREPMARALRMRSKATKVIRDVMEEHGFLDVETPTLTRSTPEGARDFLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P R+  G++YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E S
Sbjct: 179 PVRLQPGTWYALPQSPQLFKQLLMVAGLERYYQIARCYRDEDFRADRQP-EFTQLDVEAS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+Q+DIL   E ++  V++E            R+ Y +A+ RYG+DKPDLR    +  +
Sbjct: 238 FVDQEDILRIGEAIVAAVWKETLGVEI-PLPLPRMKYHEAMDRYGSDKPDLRFGQELTEL 296

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE+F  +EFRVF         Y    +   G    R   D   +WA+++G  GLAY+   
Sbjct: 297 TEYFAGTEFRVFQAP------YVGAVVMPGGAAQTRKELDGWQDWAKARGARGLAYVVI- 349

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             ++      GPVAK+L+  +   +  ++  + GD+ FF AG           AR  I +
Sbjct: 350 --DAETGELRGPVAKNLSEAHLAGLADKVGAKPGDAVFFAAGKRTASQELLGAARLEIGR 407

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNE----EEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +I  + ++F W++DFP +E  E    E+      H+PFT P          D  S  
Sbjct: 408 RGALIEESAWKFLWVVDFPMFEPIEDAAGEQTGWHAVHHPFTAPTAESLDTFDKDPGSAL 467

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H  +V  +AF  +G+S+E  +++FG L  AF  G PPHGG
Sbjct: 468 SNAYDIVLNGTELGGGSIRIHRKDVQERAFDAIGLSQEEAQSQFGFLLEAFNYGPPPHGG 527

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           IA G+DR+V LL GA  +R+V  FP +    D L G+P+ ++  Q +E G+  V   KK
Sbjct: 528 IAFGLDRLVALLTGADTIRDVMAFPKTATGGDPLTGAPAPITAAQRKEAGVDAVYEAKK 586


>gi|237742493|ref|ZP_04572974.1| aspartyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229430141|gb|EEO40353.1| aspartyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 592

 Score =  597 bits (1538), Expect = e-168,   Method: Composition-based stats.
 Identities = 227/599 (37%), Positives = 343/599 (57%), Gaps = 16/599 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+ G+L V ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLGELRVKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NLNIPTGEIEVFAKEIEILNACDTLPFQISGIDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  +     +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVTGEE-ANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P      +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKVISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI    D         P+AK L+    +AI  + + + GD  F +A       S     R
Sbjct: 359 YIKLTAD-----GITSPIAKFLSEEEMKAIIEKTEAKTGDVIFIVADKKKVVASALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLS 476
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT  +              
Sbjct: 414 LKIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFTSIKAEDLDKFLAGQTED 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I+   YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF+ G PPH
Sbjct: 474 IRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFLDAFKYGAPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL ++     
Sbjct: 534 GGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFIKSTYEK 592


>gi|116492877|ref|YP_804612.1| aspartyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122265659|sp|Q03F52|SYD_PEDPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116103027|gb|ABJ68170.1| aspartyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 593

 Score =  597 bits (1538), Expect = e-168,   Method: Composition-based stats.
 Identities = 212/599 (35%), Positives = 328/599 (54%), Gaps = 12/599 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             RT   G +     G  V L GWV + R  G +IF+D+RD  GI Q+V + +  +   +
Sbjct: 1   MKRTTYAGLVNEQYTGQTVTLKGWVQKRRDLGQLIFIDLRDREGIVQLVFSSEFSADALK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA  +R+E+VL I G+V  R  + +N  + TGQIE+  Q+ +IL+ A+  P  +      
Sbjct: 61  IADQLRNEYVLEITGIVKQRKEKDVNPKMKTGQIEVEVQQAKILNSAKTPPFDIEDGVSA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + ++ KYR+LDLRR  + K +  R RI  ++   +  + F++  TP LT S+PEGARD+
Sbjct: 121 SDELKMKYRYLDLRRPEMLKGLKIRNRITQAVHSYLDEQGFLDIETPDLTKSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  G FYALPQ+PQ +KQLLM +G DRY+Q+A CFRDED R DR P EF Q+D+E
Sbjct: 181 LVPSRVYPGHFYALPQSPQLFKQLLMGAGIDRYYQLARCFRDEDLRGDRQP-EFTQIDLE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+  ++I +  E ++  V ++  + + V   F RI + +++ R+GTD+PD+R  + + 
Sbjct: 240 TSFLTAEEIQDITEGLIARVMKDTLDID-VKLPFDRISWKESMDRFGTDQPDVRFGMELK 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +++     SEF+VFS  ++     +  A+P      +R   D++ ++    G  GLA++ 
Sbjct: 299 DISSIVADSEFKVFSGAVANGGVVKAIAVPDGANNLSRKDIDKLGKYVERFGAKGLAWLK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GPVAK  N    + I  +   Q GD   F A             R  +
Sbjct: 359 ITDD-----GFSGPVAKFFNAETEKQIMEQTGAQVGDLLLFAADRAKVVGDTLGYLRVEL 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+   +I+ + F F W++D+P ++++E +++   AH+PFTMP            D     
Sbjct: 414 AKRFDMIDEDQFAFLWVVDWPLFDYDEGDQRWVAAHHPFTMPNEEDVHYLDEGEDPHQAH 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD++ NG E+  G IR +  E+  +    +G S E   ++FG L  A   G PPHGG
Sbjct: 474 AQSYDIILNGLELGGGSIRINTRELQEKMLKALGFSLESANDQFGYLLTALDYGFPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI-VENPK 596
           +A G+DR   LL+   N+R+V  FP +    + +  +P+ VS EQL EL L I V  P+
Sbjct: 534 LAIGLDRFARLLVKRDNIRDVIAFPKNSKASEPMTEAPTMVSEEQLAELSLDIDVRKPE 592


>gi|254823291|ref|ZP_05228292.1| aspartyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 591

 Score =  597 bits (1538), Expect = e-168,   Method: Composition-based stats.
 Identities = 234/607 (38%), Positives = 339/607 (55%), Gaps = 28/607 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+ G L  SD G  V L+GWV R R HGG+IF+D+RD  GITQVV   +    + A  
Sbjct: 3   RSHAAGSLRSSDAGQQVTLAGWVARRRDHGGVIFIDLRDASGITQVVFRAEDVLAQ-AHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R     N  I TG+IE++A  + +L  +    LP   +    E +
Sbjct: 62  LRAEFCVAVSGVVEIRPEGNANPEIATGEIEVNATALTVLGESAP--LPFQLDEPAGEEL 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRRD   + I  R+++  + R  +   +F+E  TP +T S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRRDGPAEAIRLRSKVNAAARAVLAQHDFVEIETPTITRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 180 RLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +DIL   E +L  ++        +     RI Y +A+RR+G+DKPD+R  + + + TE
Sbjct: 239 DAEDILAISEEILSALWALIG--YQIPTPIPRISYAEAMRRFGSDKPDMRFGLELVDCTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+     
Sbjct: 297 FFKDTTFRVFQAP------YVGAVVMPGGASQPRRTLDGWQEWAKQRGHRGLAYVLIA-- 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G +   GPVAK+L+    + +   +  + GD  FF AG P    +    AR  IA  L
Sbjct: 349 DDGTLG--GPVAKNLSDAERDGLAAHVGAEPGDCVFFSAGPPKPSRALLGAARGEIAHRL 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
           G+I+ + + F W++D P +E  ++                 H+ FT P+ G E     D 
Sbjct: 407 GMIDPDAWAFVWVVDPPLFEPADDATAAGDVAVGSGAWTAVHHAFTSPKPGHEDAIDTDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            ++ A  YD+VCNG EI  G IR H  ++  + F+ +G+     E +FG L  AF  G P
Sbjct: 467 GNVLADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDHAEAEEKFGFLLEAFTFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRI  LL G  ++REV  FP +    D L  +P+ ++ +Q +E G+     
Sbjct: 527 PHGGIAFGWDRINALLSGVDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESGID--AK 584

Query: 595 PKKILKI 601
           P+K+ + 
Sbjct: 585 PEKVDRA 591


>gi|55823855|ref|YP_142296.1| aspartyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|62287520|sp|Q5LXN1|SYD_STRT1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|55739840|gb|AAV63481.1| aspartyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 583

 Score =  597 bits (1538), Expect = e-168,   Method: Composition-based stats.
 Identities = 228/590 (38%), Positives = 347/590 (58%), Gaps = 17/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61
           R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP   D+A  E 
Sbjct: 3   RSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENADAAVVET 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+RSE+V+ + G V +R  E  N N+ TG +EL  + +++L+ A+  P  +    E  
Sbjct: 63  AESLRSEFVIEVTGTVEAR--EQANDNLPTGAVELKVEDLKVLNTAKTTPFEIKDGVEAS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R +YR+LDLRR  + +N   R ++ +++R  +    FI+  TP+LT S+PEGARD+L
Sbjct: 121 DDTRMRYRYLDLRRPEMLENFKLRAKVTHTIRNYLDDLEFIDVETPMLTKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ + +I +  E ++  V +E      V+  F R+ YDDA+  YG+DKPD R  +++ +
Sbjct: 240 SFLNEQEIQDITEGLIAKVMKETKGVE-VTLPFPRMSYDDAMNNYGSDKPDTRFDMLLQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     +F+VF++     P  +   +       +R   D++ ++A+  G  GLA++  
Sbjct: 299 LTELVKDIDFKVFAEA----PAVKAIVVKGNADKYSRKSIDKLTDFAKQFGAKGLAWVKM 354

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G +A  GPVAK L  +  E +   L +++ D   F+A       +     RN IA
Sbjct: 355 T---DGVLA--GPVAKFLTSIE-EKLTDTLQIEENDLVLFVADTLEIANNTLGALRNQIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL +I+   F F W++D+P +EW+EEE +   AH+PFT+P     +    DL  ++A  
Sbjct: 409 KELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDLSKVRAVA 468

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+E+  G +R +  ++  +    +G S+E    +FG L  A   G PPHGG+A 
Sbjct: 469 YDIVLNGYELGGGSLRINQKDLQERMLKALGFSEESAYEQFGFLLEAMDYGFPPHGGLAL 528

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL L +
Sbjct: 529 GLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHV 578


>gi|255325074|ref|ZP_05366180.1| aspartate--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297639|gb|EET76950.1| aspartate--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 610

 Score =  597 bits (1538), Expect = e-168,   Method: Composition-based stats.
 Identities = 233/598 (38%), Positives = 329/598 (55%), Gaps = 27/598 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L     G  V L+GWV R R HGG+IF+D+RD  GI QVV   +S   E A  
Sbjct: 3   RTHLAGELRKELAGETVTLTGWVSRRRDHGGVIFIDLRDRSGIAQVVF-RESDVAERAHD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYP 121
           +RSE+ + + G V  R   + N N+ +G+IE++   +E+L+ +  LP  +       E  
Sbjct: 62  LRSEYCVKVTGTVEPRPEGSENPNLPSGEIEVNVADLEVLNKSAALPFQIDDPSTSGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR+   + +  R+    + R  + + +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRERQAQALRLRSAANRAARKVLDSHDFAEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G++YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLKPGTWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E ++  +++       +     R+ Y DA++ YG+DKPDLR  I +  
Sbjct: 241 SFVDQDDVIALAEEIVTELWKLIG--YEIKTPIPRMTYADAMKYYGSDKPDLRFDIKIVE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAYI  
Sbjct: 299 CTEFFKDTTFRVFQN------EYVGAVVMEGGASQPRRQFDAWQDWAKQRGAKGLAYIT- 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G +   GPVAK++     E I   +  + GD+ FF AGD     +    AR  IA
Sbjct: 352 -VGEDGTLG--GPVAKNITDAEREGIAEHVGAKPGDAIFFAAGDTKSSRALLGAARGEIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGMESLKG 471
           ++L +I    + F W++D P +E + +            K    H+ FT P+        
Sbjct: 409 KKLDLIKEGDWAFTWVVDAPLFEPSADATASGDVALGHSKWTAVHHAFTSPKPEYLDNFD 468

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            +     A+ YD+VCNG EI  G IR H  +V  + F  +GI  E  + +FG L  AFQ 
Sbjct: 469 QNPGEALAYAYDIVCNGNEIGGGSIRIHQQDVQKRVFDVMGIGDEEAQEKFGFLLDAFQY 528

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ +   Q +E G+
Sbjct: 529 GAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAAIPAAQRKETGV 586


>gi|304383159|ref|ZP_07365633.1| aspartate--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335736|gb|EFM01992.1| aspartate--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 589

 Score =  597 bits (1538), Expect = e-168,   Method: Composition-based stats.
 Identities = 225/602 (37%), Positives = 344/602 (57%), Gaps = 19/602 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT++CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   D+A  +
Sbjct: 1   MYRTNTCGELRLSDAGKHVTLAGWVQRTRKMGGMTFVDLRDRYGITQLVFNEAVDAALCD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ +  +G V  R  E+ NAN+ TG IE+ A  + +LS +   P  +    + 
Sbjct: 61  EANKLGREYCIQAEGTVSER--ESKNANLPTGDIEILASALHVLSSSITPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  + +N+  R R+   +R  + A+ FIE  TPIL  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRQVVRQNLELRHRMTILVRNYLDAQQFIEVETPILIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+NQG FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNQGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF  Q+++L   E + R +F+E    + + +   ++ + +A+RR+G+DKPDLR  +   
Sbjct: 238 MSFAHQENVLAMFEGMARHLFKEVRGVD-LPDPLPQMTWHEAMRRFGSDKPDLRFGMEFV 296

Query: 301 NVTEHFVHSE-FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + +    +  F VF+    +           K    +R   + + ++ +    G  GL 
Sbjct: 297 ELMDVLKGTGTFSVFNDANYIG-----AICVPKCAHYSRKQLNELTDFVKRPQVGAAGLV 351

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADA 416
           ++  +++E G +     + K         ++     + GD    ++G+ P K  +  +  
Sbjct: 352 WV--KIEEDGTIK--SSIDKFYTPEVFAKLKETTGAKAGDLILIMSGERPNKTRTQLSTL 407

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  + + LG+ + N F   WI+DFP +EW++EE+++   H+PFTMP      L       
Sbjct: 408 RLEMGERLGLRDKNKFVCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPER 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G IR H  ++  Q F  +G + E    +FG L  AF+ G PPH
Sbjct: 468 VRALAYDFVCNGIEVGGGSIRIHDGQLQEQMFRILGFTPERAMAQFGFLINAFKYGAPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIA G+DR V ++ G  ++R+   FP + +  D+++ +PS +  +QL+EL + I  N +
Sbjct: 528 AGIAFGLDRFVSIMAGLDSIRDCIAFPKNNSGRDVMLDAPSEIDAKQLQELSISIDLNQE 587

Query: 597 KI 598
           K 
Sbjct: 588 KA 589


>gi|296139671|ref|YP_003646914.1| aspartyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296027805|gb|ADG78575.1| aspartyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 601

 Score =  597 bits (1538), Expect = e-168,   Method: Composition-based stats.
 Identities = 234/615 (38%), Positives = 333/615 (54%), Gaps = 26/615 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L   D G+ V L+GWV R R HGG+IF+D+RD  G+ QVV   +SA  E A  
Sbjct: 3   RTHLAGSLRAEDAGTVVTLTGWVARRRDHGGVIFIDLRDSSGVAQVVF-RESAVAEQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + + G V  R   + N N+ +G IE++   + +L+ +    LP   + E  E  
Sbjct: 62  LRSEYCVLVTGTVEKRPEGSENPNLPSGAIEVNVTDLTVLNESAP--LPFQLDEEPGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+     I  R++     R  +   +F E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRREGPAAAIKLRSQANAVARNILALNDFTEIETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 180 RLRPGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +Q+D++   E +++ ++      + +     R+ Y +A+RR+G+DKPDLR  + +   TE
Sbjct: 239 DQEDVIALGEQIVKALWSLIG--HEIPTPIPRLTYAEAMRRFGSDKPDLRFGLELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 297 YFSGTPFRVFQAP------YVGAVVMPGGASQPRRQLDAWQEWAKQRGARGLAYVL--IG 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L+      +   +  Q GD  FF AG      +    AR  IA +L
Sbjct: 349 EDGELT--GPVAKNLSDDERAGLAAHVGAQPGDCVFFAAGPTKTMRALLGAARGEIADKL 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDL 474
           G+I    + F W++D P +E  ++          +      H+ FT P+         D 
Sbjct: 407 GLIKDGDWAFTWVVDAPLFEPADDATASGDVAVGDGAWTAVHHAFTSPKPESIDTFDTDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD+VCNG EI  G IR H  +V  + F+ +GI +E    +FG L  AF  G P
Sbjct: 467 GSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFAIMGIDEEQAREKFGFLLDAFSYGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DR+V LL GA ++REV  FP S    D L  +P+ ++ +Q RE G+     
Sbjct: 527 PHGGIAFGWDRVVSLLAGAPSIREVIAFPKSGGGVDPLTDAPAAITAQQRRESGMDAKPK 586

Query: 595 PKKILKISVTTILRN 609
             +            
Sbjct: 587 AAEPKPDPAAAQPTE 601


>gi|28211802|ref|NP_782746.1| aspartyl-tRNA synthetase [Clostridium tetani E88]
 gi|46577247|sp|Q892B2|SYD_CLOTE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|28204244|gb|AAO36683.1| aspartyl-tRNA synthetase [Clostridium tetani E88]
          Length = 592

 Score =  597 bits (1538), Expect = e-168,   Method: Composition-based stats.
 Identities = 224/594 (37%), Positives = 340/594 (57%), Gaps = 14/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG L   ++     + GWV R R  GG+IF+D+RD  GI QVV     +   FE 
Sbjct: 9   KRTIMCGQLREENINEQHTVMGWVQRKRNLGGLIFIDLRDRDGILQVVFGEEINKEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A +VRSE+ L + G ++ R A  +N N+ TG +EL  + I+ILS +E  P+ +  + +  
Sbjct: 69  ADTVRSEYCLAVTGKIIKRQA--VNENLPTGIVELQGESIKILSESETPPIYIKEDLDAA 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + K +  R +   ++R  +  E F+E  TP+LT S+PEGARD+L
Sbjct: 127 ENIRLKYRYLDLRRPDMQKILKIRHKTAKAVRDFLDKEEFLEVETPMLTKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQ+PQ +KQLLM SGFD+YFQI  CFRDED R++R P EF Q+D+EM
Sbjct: 187 VPSRNYPGMFYALPQSPQLFKQLLMVSGFDKYFQIVKCFRDEDLRANRQP-EFTQIDLEM 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE DD+++  E +++ VF+     +       R+ Y  A+ +YG+DKPDLR  + + N
Sbjct: 246 SFVEMDDVIDLNERLIQYVFKNVVGKDI-KLPIERMPYKIAMSKYGSDKPDLRFGMEIEN 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           + +    + F+VF +++               G G R   D++ ++ ++    GLA+I +
Sbjct: 305 LDDVLKETSFKVFKEVIDNGGTVSAIKAENCAGMG-RKQIDKLGDFVKTFKAKGLAWIAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHI 420
           + DE        P+AK L     ++I  ++D + GD    +               R H+
Sbjct: 364 KEDE-----IKSPIAKFLTEEELKSIIDKMDAKVGDLILIVSDAKEKVVQQSLGQLRLHL 418

Query: 421 AQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           A+ELG++ + +   F W+ +FP   +NEEE + +  H+PFT P          D   ++A
Sbjct: 419 AKELGLLKDNDELRFVWVTEFPLVSYNEEEDRWEAEHHPFTAPMDEDIQYLDTDPGKVRA 478

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H +++  + F  +G ++E    RFG L  AF+ G PPHGG+
Sbjct: 479 KAYDIVLNGEELGGGSIRIHDTKLQEKMFEVLGFTEEKAWERFGFLLEAFKFGPPPHGGL 538

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G DR++M L G +N+++V  FP +QN    +  +P+ V   QL ELG++I +
Sbjct: 539 AFGFDRMIMFLSGTENIKDVIAFPKNQNAFCPMTEAPNVVDEVQLDELGIKIKK 592


>gi|288926986|ref|ZP_06420881.1| aspartate--tRNA ligase [Prevotella buccae D17]
 gi|288336232|gb|EFC74618.1| aspartate--tRNA ligase [Prevotella buccae D17]
          Length = 587

 Score =  597 bits (1538), Expect = e-168,   Method: Composition-based stats.
 Identities = 226/599 (37%), Positives = 337/599 (56%), Gaps = 20/599 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT +CG+L +SD G+ V L+GWV R R  GG+ F+D+RD YGITQ+V N   + A  E
Sbjct: 1   MYRTKTCGELRLSDAGTEVTLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEADNRALCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + + G V  R ++  N N+ TG IE+    + +LS +   P  +    + 
Sbjct: 61  EANKLGREYCVQVKGRVSERQSK--NPNMDTGDIEIIVSALTVLSPSLTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LD+RR  + KN+  R R+   +R  + +  F+E  TPIL  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDIRRAAVRKNLELRHRMTILIRNFLDSRQFMEVETPILIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +G DRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGVDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+LN  E++ R +F+E            R+ + DA+RRYG+DKPD+R  +   
Sbjct: 238 MSFVEQEDVLNIFEDMARHLFKEIRGVELPPL--ERMKWHDAMRRYGSDKPDVRFGMEFV 295

Query: 301 NVTEHFVHSE-FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + E F     F VF +   +                +R   + + ++ +    G  GL 
Sbjct: 296 ELKEAFAGKGAFSVFDEAAYIGG-----ICVPGCADYSRKQLNELTDFVKRPQVGAKGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           +I ++ D          + K  +      I+  +  +DGD    ++GD   K        
Sbjct: 351 FIKYQADG----TVKSSIDKFYSPEVLAEIKQTMGAKDGDLVLILSGDNANKTRVQLCSL 406

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L       
Sbjct: 407 RLEMGDRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDLPLLDEHPEQ 466

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G +R H + +  + F  +G + E  E +FG L  AF+ G PPH
Sbjct: 467 VRAVAYDFVCNGIEVGGGSLRIHDTRLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAPPH 526

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+A G+DR V +L G  ++R+   FP + +  D+++ +P T+  +QL EL L++VE+P
Sbjct: 527 AGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLDAPGTIDQKQLDELQLKLVESP 585


>gi|294784989|ref|ZP_06750277.1| aspartate--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294486703|gb|EFG34065.1| aspartate--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 592

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 225/599 (37%), Positives = 342/599 (57%), Gaps = 16/599 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+ G+L V ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLGELRVKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NLNIPTGEIEVFAKEIEILNACDTLPFQISGIDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E+SFVE++D++N +E + + VF+  +     +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEISFVEKEDVMNEIEGLAKYVFKNVTGEE-ANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P      +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAVVAPNANEKFSRKVISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI    +         P+AK L+    +AI  +   + GD  F +A       S     R
Sbjct: 359 YIKLTAN-----GITSPIAKFLSEEEMKAIIEKTKAKTGDVIFIVADKKKVVVSALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLS 476
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT  +              
Sbjct: 414 LKIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFTSIKAEDLDKFLTGQTED 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I+   YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF+ G PPH
Sbjct: 474 IRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFLDAFKYGAPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL ++     
Sbjct: 534 GGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFIKSTYEK 592


>gi|325846752|ref|ZP_08169667.1| aspartate--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481510|gb|EGC84551.1| aspartate--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 585

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 216/594 (36%), Positives = 335/594 (56%), Gaps = 10/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACF 59
           M   R+H CG+L   ++G  V L GWV + R  G ++F+D+RD  GITQ V    DS  +
Sbjct: 1   MEFKRSHMCGELREENIGEEVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVTREEDSENY 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  K V SE+VL + G V  R  E+ N  I TG IE+ A+KI IL  A+  P+ +  + +
Sbjct: 61  KTVKDVASEYVLEVKGEVRER--ESKNPEIPTGNIEIVAEKINILDKAKTPPIYIKDDDD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+++ KYR+LD+R+ ++ KN+  R+ I+  MR  M    F E  TP LT  +PEGARD
Sbjct: 119 VSENLKLKYRYLDMRKQSVQKNLKLRSDIVRCMREYMYDNKFTEVETPFLTKPTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVNQG FYALPQ+PQ  KQLLM    DRYFQI  CFRDED R++R P EF QLD+
Sbjct: 179 YLVPSRVNQGKFYALPQSPQLMKQLLMIGSLDRYFQIVKCFRDEDLRANRQP-EFTQLDI 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E+SF +QDD++   E +L+ +F+ F++ + +     R+ Y +A+  YG+DKPDLR    +
Sbjct: 238 ELSFADQDDVIKVNEGLLKKLFDTFTDYD-LQLPIPRMDYSEAMNSYGSDKPDLRYGYKI 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++E F  S+F+VF+  +             +    +R   D++ ++ +  G  GL++I
Sbjct: 297 NDISEIFKGSDFKVFTDNIKEGHSVRAINFTGQASNYSRKQLDKLTDFVKDYGLKGLSFI 356

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  D   N      + K L       ++ +LD++D D     A             R  
Sbjct: 357 KFNSDNDIN----SSIKKFLTDDIINNLKEKLDIKDNDLVLIAADKNKTVLEGLGALRRK 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A++  +     + FCW+++FP +E++EEE +    H+PFTMP      L   +   ++ 
Sbjct: 413 VAKDQNLYEKE-YAFCWVVNFPMFEYSEEEDRYVSQHHPFTMPNEEDVDLLLTEPEKVRT 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G +R +  E+  + F  + +S E ++ +FG    A Q G PPH G+
Sbjct: 472 QAYDIVINGDEMGGGSVRINNQELQEKVFKALKLSDEDIKQKFGFFIEALQYGTPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DR+VML     N++++  FP +Q+    L  +PS V  + L EL + + E
Sbjct: 532 AYGLDRMVMLFAKTDNIKDIIAFPKTQSATCPLTQAPSIVDEKSLSELSIEVKE 585


>gi|300769899|ref|ZP_07079778.1| aspartate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762375|gb|EFK59192.1| aspartate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 587

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 229/595 (38%), Positives = 332/595 (55%), Gaps = 20/595 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           MH  RTH+CG+L +SD+G  V LSGWV + R  GG+ F+D+RD YGITQ+  N D     
Sbjct: 1   MH--RTHTCGELRISDLGKSVTLSGWVQKSRDLGGMTFIDVRDRYGITQLTFNADDNEQL 58

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
              A+ +  E+V+ ++G V+ RS++  N+ I TG IE+    +EIL+ ++  P  +  E 
Sbjct: 59  RASARELGREYVIKVEGQVIERSSK--NSKIPTGDIEIKVSSLEILNASKLPPFTIEDET 116

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  + +R K+R+LDLRR+ + +N++ R ++   +R  +  +NF+E  TP+L  S+PEGAR
Sbjct: 117 DGGDDLRMKFRYLDLRRNPVRQNLILRHKLAQEIRRYLDEQNFLEVETPVLIKSTPEGAR 176

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DF+VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D
Sbjct: 177 DFVVPSRMNAGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQID 235

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            EMSFVEQ+DILN  E + + +F+        S    R+ Y DA+R YG+DKPD R  + 
Sbjct: 236 CEMSFVEQEDILNMFEGLAKHLFKTVKGFELGSV--PRMTYADAMRLYGSDKPDTRFGMQ 293

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGL 356
              + +      F VF +   V              G  R   D + ++ +    G  GL
Sbjct: 294 FVELNKLTKGKGFPVFDQAELVVGINANGC-----AGYTRKQLDALTDYVKRPQVGATGL 348

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            Y   R +E G +     V K       +      D + GD    +AG   K      + 
Sbjct: 349 VYA--RYNEDGTIK--SSVDKFYTEEQLKEWAAAFDGKPGDLFLIMAGPTDKVRKQLNEL 404

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +  +LG+ + N F   W++DFP  EW+EE  +    H+PFT P+     L   +   
Sbjct: 405 RLEVGNQLGLRDKNKFAPLWVLDFPLLEWDEESGRYHAMHHPFTSPKPEDIPLLDTNPGE 464

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD V NG EI  G IR H  E+    F ++G S E  + +FG L  AF  G PPH
Sbjct: 465 VRANAYDFVLNGSEIGGGSIRIHDKELQSLMFKHLGFSPEDAQKQFGFLMEAFTYGAPPH 524

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GG+A G DR+V +  G   +R+V  FP + +  D+++ +P+T+   QL EL L +
Sbjct: 525 GGLAFGFDRMVSVFAGLDTIRDVIAFPKNNSGRDVMIDAPATIDKAQLDELNLAL 579


>gi|325918028|ref|ZP_08180191.1| aspartyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325535761|gb|EGD07594.1| aspartyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 583

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 220/591 (37%), Positives = 335/591 (56%), Gaps = 12/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P++   F +A 
Sbjct: 2   RTHFCGLVDETMIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPENAEVFPVAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+  E VL ++G+V +R A  +N  + +G++E+ A +I IL+ A    LP        E 
Sbjct: 62  SLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIATRITILNKAAP--LPFHAHENPGEE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGARDFLVP
Sbjct: 118 TRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGARDFLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLDME +F
Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V + D+ + +E+++R +F+E  + + ++  F R+ + +A+RRYG+DKPDLR  + + +V 
Sbjct: 237 VRERDVQDFVEDMIRSIFKEVVDVD-LAAQFPRMTWAEAMRRYGSDKPDLRIALELIDVA 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E    SEF VF+   +   G         G   +R   D     A   G  GLAYI  +L
Sbjct: 296 ELVKASEFPVFTAAANDADGRVAALRIPGGAALSRKQIDEYAAHAAKYGSKGLAYI--KL 353

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            ++G V+   P+AK  +     A+   +   +GD  FF AG       F    R    ++
Sbjct: 354 SDTGEVS--SPIAKFFSEDAFAALLKHVGAGNGDIVFFGAGRYNTVSDFMGALRLKAGKD 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             +I  + +   W+ DFP +EW++E ++    H+PFT P     +    +  +  +  YD
Sbjct: 412 FKLI-ADGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARTAVSRGYD 470

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGGIA GI
Sbjct: 471 MVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIAFGI 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   
Sbjct: 531 DRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQVRPK 581


>gi|261366606|ref|ZP_05979489.1| aspartate--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282571425|gb|EFB76960.1| aspartate--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 595

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 220/596 (36%), Positives = 341/596 (57%), Gaps = 12/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG++ ++D G  + + G + R R  GGIIF D+RD  GI Q+V + D+    F  A
Sbjct: 9   RTRYCGEVSLADAGQEMTVCGSIARARDKGGIIFADLRDTTGILQLVFDEDTPKEVFAKA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +S++SE+V+   G +  R+++T    I TG +EL   ++ +LS A+  P  +  E    +
Sbjct: 69  ESLKSEYVVICRGKLRERASKT--DKIATGDVELYVSELRVLSEAQTPPFEIRDEINVND 126

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLRR ++H+ IV R++I+  +R      +F E  TP L  S+PEGARD+LV
Sbjct: 127 DLRLRYRYLDLRRPSMHEPIVLRSKIMQIIRSYFTDNHFTEIETPTLIKSTPEGARDYLV 186

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ YKQ+LM SGFDRYFQIA C+RDED R+DR P EF Q+D EMS
Sbjct: 187 PSRVQPGHFYALPQSPQLYKQILMLSGFDRYFQIARCYRDEDLRADRQP-EFTQVDEEMS 245

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV +DDI+   E +L+ +++E    + +   F R+ ++DA+ R+G+DKPD R  + + +V
Sbjct: 246 FVTEDDIMTVNEGLLKRLWKEMLGID-LVTPFERMPWNDAMSRFGSDKPDTRFGLEIQDV 304

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T  F ++EF+ F+ ++                  +R   D++ E A++ G  GLAY    
Sbjct: 305 TSVFANTEFKPFAAVIEAKGTIRAINAKGLADKLSRKNIDKLGEVAKTYGAKGLAYSRLT 364

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHIA 421
            D            K L      A+   L  + GD    +   D +K C+     R  IA
Sbjct: 365 AD-----GTSSSFEKFLTEEEKTALYAALGAETGDVLLLVSDADWVKACTALGQVRLDIA 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++  +I+ + F F W++DFP +E++E+E +    H+PFTMP+        +D  +  A  
Sbjct: 420 RKHDLIDNDKFNFLWVVDFPLFEYSEQEGRWMAMHHPFTMPKAEDLDKIESDPGACHAVA 479

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G +R +   +  + F  +G ++E     FG L  A++ G PPHGG+A 
Sbjct: 480 YDIVLNGVELGGGSMRINDPALQDRMFKALGFTEEKARASFGFLMDAYKFGAPPHGGMAY 539

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VML+L   ++R+V  FP  QN  + + G+P  V  +QL +L + +    K+
Sbjct: 540 GLDRMVMLMLKKDSIRDVIAFPKVQNAGEPMSGAPDVVDEKQLADLSIALTLPEKE 595


>gi|118617364|ref|YP_905696.1| aspartyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118569474|gb|ABL04225.1| aspartyl-tRNA synthetase AspS [Mycobacterium ulcerans Agy99]
          Length = 593

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 233/608 (38%), Positives = 335/608 (55%), Gaps = 28/608 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M   R+H+ G L  SD G  V L+GWV R R HGG+IF+D+RD  GI QVV   ++    
Sbjct: 1   MFVLRSHAAGALRDSDAGRQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVF-READVLA 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +R+E+ + + G+V  R     N  I TG+IE++A  + +L       LP   +   
Sbjct: 60  QAHRLRAEFCVAVTGVVEIRPEGNANPEIATGEIEVNASSLTVLGECAP--LPFQLDEPA 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRRD     I  R+++  + R  +   +F+E  TP +T S+PEGARDF
Sbjct: 118 GEELRLKYRYLDLRRDGPASAIRLRSKVNAAARAVLAGHDFVEIETPTITRSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDME
Sbjct: 178 LVPARLHPGMFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDME 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ +DI+   E +L  ++        +     RI Y DA+RR+G+DKPDLR  + + 
Sbjct: 237 LSFVDVEDIIAVSEEILTALWALIG--YRIPTPTPRISYADAMRRFGSDKPDLRFGLELV 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
              E F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+ 
Sbjct: 295 ECAEFFKDTTFRVFQAP------YVGAVVMPGGASQPRRTLDGWQEWAKQRGHRGLAYVL 348

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +   GPVAK+L     + +   +    GD  FF AG      +    AR  I
Sbjct: 349 --VGEDGTLG--GPVAKNLTDAERDGLAAHVGASPGDCIFFSAGPVRASRALLGAARIEI 404

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLK 470
           A+ L +I+ + +EF W++D P +E  E+                 H+ FT P+  +E   
Sbjct: 405 AERLNLIDPSAWEFVWVVDPPLFEPAEDATASGDVAVGSGAWTAVHHAFTAPKPELEDRI 464

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            +D  S+ A  YD+VCNG EI  G IR H  ++  + F+ +G+SK   E +FG L  A  
Sbjct: 465 ESDPGSVLADAYDIVCNGHEIGGGSIRIHRRDIQERVFAVMGLSKAEAEEKFGFLLEALT 524

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DR+  LL GA ++R+V  FP +    D L  +P+ ++ +Q +E G+ 
Sbjct: 525 FGAPPHGGIAFGWDRVSTLLAGADSIRDVIAFPKTGGGVDPLTEAPAPITAQQRKEAGID 584

Query: 591 IVENPKKI 598
               PK++
Sbjct: 585 --AKPKQV 590


>gi|298484029|ref|ZP_07002198.1| aspartate--tRNA ligase [Bacteroides sp. D22]
 gi|298269810|gb|EFI11402.1| aspartate--tRNA ligase [Bacteroides sp. D22]
          Length = 587

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 226/598 (37%), Positives = 332/598 (55%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            +RTH+CG+L +SDV   V LSGWV R R  GG+ F+D+RD YGITQ+V N +      E
Sbjct: 1   MFRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  R ++  NANI TG IE+   ++ +L+ A   P  +    + 
Sbjct: 61  RANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR+ +  N+  R ++   +R  + +  FIE  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI+ T E + + +F+           F R+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDIITTFEGMAKHLFKTLRGVELNE-PFQRMSWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     V                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDVMKGHGFSVFDNAAYVGG-----ICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  G V     V K       + ++     + GD    ++GD + K      + R
Sbjct: 352 A--RVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     +   D  ++
Sbjct: 408 LEMGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H +++  + F  +G + E  E +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVINGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAEAQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L +    
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQSQLDELNLIVDLKE 585


>gi|183982171|ref|YP_001850462.1| aspartyl-tRNA synthetase AspS [Mycobacterium marinum M]
 gi|183175497|gb|ACC40607.1| aspartyl-tRNA synthetase AspS [Mycobacterium marinum M]
          Length = 593

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 234/608 (38%), Positives = 335/608 (55%), Gaps = 28/608 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M   R+H+ G L  SD G  V L+GWV R R HGG+IF+D+RD  GI QVV   ++    
Sbjct: 1   MFVLRSHAAGALRDSDAGRQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVF-READVLA 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +R+E+ + + G+V  R     N  I TG IE++A  + +L       LP   +   
Sbjct: 60  QAHRLRAEFCVAVTGVVEIRPEGNANPEIATGDIEVNASSLTVLGECAP--LPFQLDEPA 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRRD     I  R+++  + R  +   +F+E  TP +T S+PEGARDF
Sbjct: 118 GEELRLKYRYLDLRRDGPASAIRLRSKVNAAARAVLAGHDFVEIETPTITRSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R++ G FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDME
Sbjct: 178 LVPARLHPGMFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDME 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ +DI+   E +L  ++        +     RI Y DA+RR+G+DKPDLR  + + 
Sbjct: 237 LSFVDVEDIIAVSEEILTALWALIG--YRIPTPIPRISYADAMRRFGSDKPDLRFGLELV 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
              E F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+ 
Sbjct: 295 ECAEFFKDTTFRVFQAP------YVGAVVMPGGASQPRRTLDGWQEWAKQRGHRGLAYVL 348

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +   GPVAK+L     + +   +    GD  FF AG      +    AR  I
Sbjct: 349 --VGEDGTLG--GPVAKNLTDAERDGLAAHVGASPGDCIFFSAGPVKASRALLGAARIEI 404

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLK 470
           A+ L +I+ + +EF W++D P +E  E+                 H+ FT P+  +E   
Sbjct: 405 AERLNLIDPSAWEFVWVVDPPLFEPAEDATASGDVAVGSGAWTAVHHAFTAPKPELEDRI 464

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            +D  S+ A  YD+VCNG EI  G IR H  ++  + F+ +G+SK   E +FG L  AF 
Sbjct: 465 ESDPGSVLADAYDIVCNGHEIGGGSIRIHRRDIQERVFAVMGLSKAEAEEKFGFLLEAFT 524

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DR+  LL GA ++R+V  FP +    D L  +P+ ++ +Q +E G+ 
Sbjct: 525 FGAPPHGGIAFGWDRVSTLLAGADSIRDVIAFPKTGGGVDPLTEAPAPITAQQRKEAGID 584

Query: 591 IVENPKKI 598
               PK++
Sbjct: 585 --AKPKQV 590


>gi|94989454|ref|YP_597555.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94993342|ref|YP_601441.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94542962|gb|ABF33011.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94546850|gb|ABF36897.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 599

 Score =  596 bits (1536), Expect = e-168,   Method: Composition-based stats.
 Identities = 226/597 (37%), Positives = 346/597 (57%), Gaps = 17/597 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +   R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    +
Sbjct: 16  LFMKRSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSD 75

Query: 61  I---AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           +   A+ +RSE+V+ ++G V +R     N  + TG +EL    + IL+ A+  P  +  +
Sbjct: 76  VMATAERLRSEYVIEVEGFVEARQ--QANDKLATGMVELKVSALTILNTAKTTPFEIKDD 133

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            E  +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGA
Sbjct: 134 VEVSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGA 193

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+
Sbjct: 194 RDYLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQV 252

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+E SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +
Sbjct: 253 DLETSFLSEQEIQDIVEGMIATVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEM 311

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           ++ ++T      +F+VFS+     P  +   +       +R   D++ E+A+  G  GLA
Sbjct: 312 LLQDLTVTVKGIDFKVFSEA----PAVKAIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA 367

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++       G +A  GPVAK L  + TE +  +L + + D   F+A       +     R
Sbjct: 368 WVKVT---DGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVADTLEVANNTLGALR 421

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           N IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  +
Sbjct: 422 NRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKV 481

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  E+  + F  +G + +    +FG L  A   G PPHG
Sbjct: 482 RAIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANAQFGFLLEAMDYGFPPHG 541

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I  +
Sbjct: 542 GLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQIESH 598


>gi|325929372|ref|ZP_08190502.1| aspartyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325540284|gb|EGD11896.1| aspartyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 588

 Score =  596 bits (1536), Expect = e-168,   Method: Composition-based stats.
 Identities = 220/596 (36%), Positives = 336/596 (56%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + +G++E+ A +I IL+ A    LP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIATRISILNKAAP--LPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RR+G+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMIRAIFKEVVDVD-LAAQFPRMTWAEAMRRFGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V E    S+F VF+       G         G   +R   D     A   G  GLAY
Sbjct: 296 LVDVAELVKASQFPVFTAAADDADGRVAALRIPGGASLSRKQIDEYAAHAAKYGAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +L E+G V+   P+AK  +  +  A+   +   +GD  FF AG   K   F    R 
Sbjct: 356 I--KLSETGEVS--SPIAKFFSEESFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              ++  ++  + +   W+ DFP +EW+EE ++    H+PFT P     +    +  +  
Sbjct: 412 KAGKDFNLV-ADGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANARTAV 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGG
Sbjct: 471 SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ +++   
Sbjct: 531 IAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQVRPK 586


>gi|295396092|ref|ZP_06806275.1| aspartate--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971033|gb|EFG46925.1| aspartate--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 590

 Score =  596 bits (1536), Expect = e-168,   Method: Composition-based stats.
 Identities = 230/606 (37%), Positives = 327/606 (53%), Gaps = 31/606 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    V   V ++GWV R R HGG+ F+D+RD  GI QVV + D     +A  
Sbjct: 3   RTHEAGSLRTDHVDQTVTVTGWVDRRRDHGGVAFIDLRDASGIVQVVVHED-----VADE 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE---YP 121
           +++E V+ + G V  R     N  + TG+IE+    +EIL+ A  LP  V    E     
Sbjct: 58  LKNETVVKVTGTVKPRPEGNTNDALPTGEIEVVDTDVEILAQAAALPFQVSEHAEDSKVG 117

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR      +  R+ +  + R  +    FIE  TP LT S+PEGARDF+
Sbjct: 118 EETRLKYRYLDLRRPASGNVLRLRSDVNKTARQVLDKHKFIEIETPTLTRSTPEGARDFV 177

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLL  +G +RY+QIA C+RDED R+DR P EF QLD+E 
Sbjct: 178 VPARLKPGSWYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEA 236

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQDDI+   E +L  +++       +     R+ Y DA+ +YGTDKPDLR  + + +
Sbjct: 237 SFVEQDDIIALAEEILVELWKLI--DVEIPTPIERMTYKDAMEKYGTDKPDLRFGLPLTD 294

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE+F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAY+  
Sbjct: 295 LTEYFAGTGFRVFQAP------YVGAVVYPGGASLPRRQFDAWQDWAKQRGAKGLAYV-- 346

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++ E G +   GPVAK+L+      +   +    GD+ FF AG      +    AR  I 
Sbjct: 347 QVGEDGTLG--GPVAKNLSDEEKNGLAAAVGANPGDAIFFAAGKATDSRALLGAARVEIG 404

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKG 471
           +  G+I    + F W++D P +E  E+          +      H+ FT P+        
Sbjct: 405 ERTGLIKEGDWSFVWVVDAPMFEPAEDAVAAGDVAVGDGSWTAVHHAFTAPKPEFADTFD 464

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D  S  A+ YD+VCNG EI  G IR H  +V  + F  +GIS+E  + +FG L  AF+ 
Sbjct: 465 TDPGSALAYAYDIVCNGNEIGGGSIRIHRPDVQERVFKVMGISQEDAQEKFGFLLDAFKF 524

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DR+V LL G +++R+   FP S N  D L  +P+ ++ +Q +E G+  
Sbjct: 525 GAPPHGGIAFGWDRLVSLLAGTESIRDTIAFPKSGNGYDPLTAAPAPITDQQRKEAGVDY 584

Query: 592 VENPKK 597
                +
Sbjct: 585 TPEDDE 590


>gi|237713222|ref|ZP_04543703.1| aspartyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262406638|ref|ZP_06083187.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294807778|ref|ZP_06766569.1| aspartate--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229446689|gb|EEO52480.1| aspartyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262355341|gb|EEZ04432.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294445016|gb|EFG13692.1| aspartate--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 587

 Score =  596 bits (1536), Expect = e-168,   Method: Composition-based stats.
 Identities = 226/598 (37%), Positives = 332/598 (55%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            +RTH+CG+L +SDV   V LSGWV R R  GG+ F+D+RD YGITQ+V N +      E
Sbjct: 1   MFRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  R ++  NANI TG IE+   ++ +L+ A   P  +    + 
Sbjct: 61  RANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR+ +  N+  R ++   +R  + +  FIE  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI+ T E + + +F+           F R+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDIITTFEGMAKHLFKTLRGVELNE-PFQRMSWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     V                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDIMKGHGFSVFDNAAYVGG-----ICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  G V     V K       + ++     + GD    ++GD + K      + R
Sbjct: 352 A--RVEADGTVK--SSVDKFYTQEVLQQMKDAFGAKPGDLILILSGDDVMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     +   D  ++
Sbjct: 408 LEMGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H +++  + F  +G + E  E +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVINGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAEAQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L +    
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQSQLDELNLIVDLKE 585


>gi|326382140|ref|ZP_08203832.1| aspartyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198870|gb|EGD56052.1| aspartyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 605

 Score =  596 bits (1536), Expect = e-168,   Method: Composition-based stats.
 Identities = 232/603 (38%), Positives = 337/603 (55%), Gaps = 28/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L   D    V + GWV R R HGG++F+D+RD  G+ QVV   D    E A  
Sbjct: 3   RTHFAGSLRREDASQTVTVVGWVARRRDHGGVVFIDLRDSSGLVQVVF-RDEQVAEAAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V +R   + NA + +G+IE++A+++ +L+ +    LP   + +  E  
Sbjct: 62  LRAEYCVQVTGQVEARPEGSENAALASGEIEINARELVVLNESAP--LPFQLDEQPGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR+   K I  R+++  + R  + + +F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLRHRYLDLRREGPAKAIRLRSQVSAAARSVLGSHDFVEIETPTLTKSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++DD++   E +L  +++       ++    R+ Y DA+RR+G+DKPDLR  I +   TE
Sbjct: 239 DEDDVIALAEEILVALWKLIG--VELTTPIPRMTYADAMRRFGSDKPDLRFDIELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  S FRVF         Y    +   G    R   D   EWA+ +G  GLAY+  +  
Sbjct: 297 FFADSPFRVFQAP------YVGAVVMPGGASQPRRQLDAWQEWAKQRGARGLAYVLVQ-- 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+++    + I   +  Q GD  FF AG      +    AR  IA +L
Sbjct: 349 EDGTLT--GPVAKNISDAERDGIAAHVGAQPGDCIFFAAGPVKAMRALLGAARGEIANKL 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
           G+I    + F W++D P +E  ++                 H+ FT P+        ++ 
Sbjct: 407 GLIKEGDWAFTWVVDAPLFEPADDATAAGDVAVGSGAWTAVHHAFTSPKPESLDKLESNP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               A+ YD+VCNG EI  G IR H  +V  + F  +GI +E  + +FG L  AF  G P
Sbjct: 467 GEALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKIMGIGEEDAQEKFGFLLDAFSYGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRI  LL G  ++REV  FP S    D L  +P+ ++ EQ +E G+     
Sbjct: 527 PHGGIAFGWDRITALLAGEPSIREVIAFPKSGGGIDPLTDAPAPITAEQRKETGID--AK 584

Query: 595 PKK 597
           P+K
Sbjct: 585 PQK 587


>gi|220916524|ref|YP_002491828.1| aspartyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254781710|sp|B8JH60|SYD_ANAD2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219954378|gb|ACL64762.1| aspartyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 603

 Score =  596 bits (1536), Expect = e-168,   Method: Composition-based stats.
 Identities = 221/602 (36%), Positives = 336/602 (55%), Gaps = 16/602 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTHSCG+L  +D+G  V L GWV+  R HGG +F+D+RD  G+TQVV   D      E+
Sbjct: 9   KRTHSCGELTKADIGKEVVLFGWVNNRRDHGGAVFIDLRDRAGLTQVVFEEDVRPDVHEL 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +R E+ + + G V+SR    +N  + TG+IE+ A  +EI + +E  P  +  E +  
Sbjct: 69  AGQLRLEYCVGVRGKVVSR-GGNVNPKLRTGEIEVHASDLEIFNRSEPAPFQIEDEIDTG 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R +YR+LDLRR  L + ++ R ++ +  R     + F+E  TP +   +P GAR+FL
Sbjct: 128 EEKRLQYRYLDLRRAPLQRTLMTRAKVNHLTRNYFTDKGFLELETPFMVKYTPGGARNFL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYAL ++PQ +KQL M +GFDRYFQI  CFRDED R DR P EF Q+D+EM
Sbjct: 188 VPSRLNPGKFYALAESPQLFKQLYMMAGFDRYFQIVRCFRDEDLRLDRQP-EFTQIDVEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI---I 298
           SFVEQ+D+ + ME ++  +++E          F R+ +++++ +YG DKPDLR  +   +
Sbjct: 247 SFVEQNDVFDVMEGLVVKLWKEVLGIEI-PRPFQRMPFEESMAKYGNDKPDLRFDMPHVV 305

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + ++          +  + +      +   +PA     +R   D++ E+ +  G  GLA 
Sbjct: 306 LTDLVRQHDGGGVPLMHEAVKAKGIVKAMRVPA-SANFSRTEIDKLEEYVKGMGAKGLAR 364

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                   G      P+AK +     +AI    + + GD   F  G      +  A+ R 
Sbjct: 365 AKV---GEGGEWTQSPLAKTITPALRQAINEACEAKPGDLLLFQFGKESVVHTVMANLRV 421

Query: 419 HIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           H+A+ +G+I        + F W+++ P +E++EE  +   AH+ FT P         +D 
Sbjct: 422 HLAKRMGLIPEYGSGGAWRFLWVVNPPLFEYDEESGQWAAAHHAFTRPHDSDLQFLESDP 481

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             +  ++YDLV NGFEI  G IR H  EV  + F  +GI+ E   ++FG L  A + G P
Sbjct: 482 GKVNCYRYDLVLNGFEIGGGSIRLHDPEVQARVFKAMGITDEEARSKFGFLLDALKMGAP 541

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL GA+++R+V  +P +Q   DL+ G+P  V   QLREL ++    
Sbjct: 542 PHGGIALGMDRLVMLLTGAESLRDVVAWPKTQKGTDLMTGAPGDVDARQLRELYVKSTYE 601

Query: 595 PK 596
           PK
Sbjct: 602 PK 603


>gi|78214099|ref|YP_382878.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|97196976|sp|Q3AGF9|SYD_SYNSC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78198558|gb|ABB36323.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 609

 Score =  596 bits (1536), Expect = e-168,   Method: Composition-based stats.
 Identities = 215/601 (35%), Positives = 337/601 (56%), Gaps = 20/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL   ++   V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSNGCGDLREQNIDQQVQLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGADAFTVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           + +RSE VL ++G V +R  E++N  + TG +E+ A  I +L+  +     P+ V  E  
Sbjct: 62  EHLRSETVLQVEGKVRARPGESLNDKLATGAVEVLASGITVLNSVKGNLPFPVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR  ++ N+  R + I + R  +    FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAQTIQAARRFLEDAGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +L+PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YLLPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQMARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q+ IL   E+++  +++       +   F RI + DA+  YGTD+PD R  + +
Sbjct: 241 EMSFMDQEQILELNESLICAIWKTVKGIE-LPRPFPRITWHDAMEHYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
            NV++      F+VFS  +      +  A+P      +         +   A+  G  GL
Sbjct: 300 TNVSDIVKDMGFKVFSGAVKAGGAVKCIAVPGGNDAVSNVRIKPGGDVFSEAQKAGAGGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  R+ + G +  +G +  +L+    + +  R   + G    F AGD           
Sbjct: 360 AFI--RVRDGGEIDTIGAIKDNLSDEQRQELLSRTGAEPGTLLLFGAGDTATVNKALDRV 417

Query: 417 RNHIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
           R ++A+ELG++    + + + F W++DFP +E+N +E + +  H+PF  P         +
Sbjct: 418 RQYLAKELGMVKADRDNDQWNFLWVVDFPMFEFNGDENRYEALHHPFCAPNAEDLGGDAS 477

Query: 473 DLLS----IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
                    +A  YDLV NG E+  G +R H S +  Q    VG++ E  + +FG L  A
Sbjct: 478 KWSETLPGARAQAYDLVLNGLELGGGSLRIHDSTLQRQVLQTVGLTLEEAQEQFGFLMDA 537

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
              G PPHGG+A G+DR+VMLL G +++R+   FP +Q    L+  +P  V+ +QL EL 
Sbjct: 538 LDVGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFPKTQQARCLMTSAPGGVADKQLEELH 597

Query: 589 L 589
           +
Sbjct: 598 V 598


>gi|94991414|ref|YP_599514.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94544922|gb|ABF34970.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 599

 Score =  596 bits (1536), Expect = e-168,   Method: Composition-based stats.
 Identities = 226/597 (37%), Positives = 346/597 (57%), Gaps = 17/597 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +   R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    +
Sbjct: 16  LFMKRSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSD 75

Query: 61  I---AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           +   A+ +RSE+V+ ++G V +R     N  + TG +EL    + IL+ A+  P  +  +
Sbjct: 76  VMATAERLRSEYVIEVEGFVEARQ--QANDKLATGMVELKVSALTILNTAKTTPFEIKDD 133

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            E  +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGA
Sbjct: 134 VEVSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGA 193

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+
Sbjct: 194 RDYLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQV 252

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+E SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +
Sbjct: 253 DLETSFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEM 311

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           ++ ++T      +F+VFS+     P  +   +       +R   D++ E+A+  G  GLA
Sbjct: 312 LLQDLTVTVKGIDFKVFSEA----PAVKAIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA 367

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++       G +A  GPVAK L  + TE +  +L + + D   F+A       +     R
Sbjct: 368 WVKVT---DGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVADTLEVANNTLGALR 421

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           N IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  +
Sbjct: 422 NRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKV 481

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  E+  + F  +G + +    +FG L  A   G PPHG
Sbjct: 482 RAIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANAQFGFLLEAMDYGFPPHG 541

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I  +
Sbjct: 542 GLAIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQIESH 598


>gi|160947632|ref|ZP_02094799.1| hypothetical protein PEPMIC_01567 [Parvimonas micra ATCC 33270]
 gi|158446766|gb|EDP23761.1| hypothetical protein PEPMIC_01567 [Parvimonas micra ATCC 33270]
          Length = 600

 Score =  596 bits (1536), Expect = e-168,   Method: Composition-based stats.
 Identities = 231/589 (39%), Positives = 339/589 (57%), Gaps = 11/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L   D+G  V L GWV + R  G +IF+D+RD  GI+Q+V         F  A
Sbjct: 19  RTHMCGNLRKEDIGKEVILMGWVAKERNLGSLIFMDLRDTTGISQIVVRDTLGETIFNCA 78

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +RSE+VL + G+V  R  E+ N  I TG IE+   ++ IL  A+  P+ +  +    E
Sbjct: 79  KEIRSEFVLAVKGIVSER--ESKNPKIPTGDIEVEVSELVILDTAQTPPIYIKDDDNVSE 136

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYRFLDLR+++L  N+  R ++   +R      NF+E  TP L   +PEGARD+LV
Sbjct: 137 SLRLKYRFLDLRKESLQNNLKLRAKVCKVIRDFYTENNFVEIETPYLNKPTPEGARDYLV 196

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G+FYALPQ+PQ  KQLLM SG DRYFQI  CFRDED R++R P EF Q+D+EMS
Sbjct: 197 PSRVNPGNFYALPQSPQIMKQLLMISGMDRYFQIVKCFRDEDLRANRQP-EFTQVDLEMS 255

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +D+++  E +L+ +F+E    +       R+ YDDA+ +YG+DKPDLR    + N+
Sbjct: 256 FVDVEDVIDVNERMLKKLFKEIKGIDI-ELPIKRMKYDDAMEKYGSDKPDLRFGFEIRNI 314

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+     EF +F   ++        +I        R   D++ +  R  G   L +I   
Sbjct: 315 TDCVKEVEFDLFKNAIASGGSVRAISIGKYSKEYTRKKIDKLIDSIRDYGAKNLFWIKIT 374

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E         ++K LN      I+ +++ +D D    +A       +     R  IA+
Sbjct: 375 DGE-----VTSSISKFLNEEIISNIKTKVEAKDDDLILMLADKNDIVLNSLGALRCVIAK 429

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E+ ++N N +  CWI+DFP +E++EEEK+    H+PFT P+        ++   + A  Y
Sbjct: 430 EMNLLNPNEYNLCWIVDFPLFEYDEEEKRYVSKHHPFTHPKDEDIKYLESNPEKVYAKAY 489

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR + S++  + F  +G++KE  E +FG L  A + G PPHGG+A G
Sbjct: 490 DIVINGDELGGGSIRINNSDLQNRMFKALGLTKEETEIKFGFLLEALKYGTPPHGGLAFG 549

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR++MLL G  N+++V  FP +Q+  DLL  +P  VS  QL EL L+I
Sbjct: 550 LDRLIMLLAGTNNIKDVIAFPKTQSASDLLTDAPCIVSEAQLEELNLKI 598


>gi|312891263|ref|ZP_07750782.1| aspartyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311296223|gb|EFQ73373.1| aspartyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 581

 Score =  595 bits (1535), Expect = e-168,   Method: Composition-based stats.
 Identities = 233/591 (39%), Positives = 336/591 (56%), Gaps = 16/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RTH+CGDL +S +G  V L GWV + R  GG  F+D+RD YG+TQ+V N D+     E++
Sbjct: 3   RTHTCGDLNISHLGQTVTLCGWVQKSRDLGGTTFIDVRDRYGLTQLVFNTDTDVALREVS 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +  E+V+ + G V+ RS +  NA + TG IE++  +IE+L+ A+  P  +  + +  E
Sbjct: 63  RGLGREFVIKVTGKVVERSNK--NAKLSTGDIEITVAEIEVLNSAKIPPFLIEDDTDGGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +  N++ R ++   +R  +   NFIE  TP+L  S+PEGARDF+V
Sbjct: 121 ELRAKYRYLDLRRAPIRNNMILRHKMAQEVRKYLDGMNFIEVETPVLIKSTPEGARDFVV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 181 PSRMNAGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q+DILNT E + R +F+     + +   F R+ Y DA+R YG+DKPD+R  +    +
Sbjct: 240 FITQEDILNTFEGLARTLFKNVKGIDLID--FPRMQYADAMRLYGSDKPDVRFGMQFVEL 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIFW 361
            +      F VF           V  I AKG     R   D + EW +         I+ 
Sbjct: 298 NDIVKGKGFGVFDNA------GLVVGINAKGAADYTRKQLDELTEWLKRPQIGATGLIYL 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R +  G++     V K  N    +      D Q GD    +AG   K      + R  + 
Sbjct: 352 RHNSDGSLK--SSVDKFYNEDELKKWSAAFDTQPGDLVLILAGQTDKVRKQLNELRLEMG 409

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             LG+ + N F   W++DFP  EW+EE  +    H+PFT P+    +L   D  +++A  
Sbjct: 410 TRLGLRDKNTFAPLWVLDFPLLEWDEETSRYHAMHHPFTSPKPEDIALLETDPGAVRANA 469

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  E+    F ++G S E  + +FG L  AF+ G PPHGGIA 
Sbjct: 470 YDMVINGIEVGGGSIRIHDRELQALMFKHLGFSPEEAQKQFGFLMDAFEFGAPPHGGIAF 529

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G DR+  +  G  ++R+V  FP + +  D+++ SPST++  QL EL ++  
Sbjct: 530 GFDRLCSIFAGLDSIRDVIAFPKNNSGRDVMIDSPSTIADAQLNELKIKTT 580


>gi|160884601|ref|ZP_02065604.1| hypothetical protein BACOVA_02590 [Bacteroides ovatus ATCC 8483]
 gi|156110340|gb|EDO12085.1| hypothetical protein BACOVA_02590 [Bacteroides ovatus ATCC 8483]
          Length = 611

 Score =  595 bits (1535), Expect = e-168,   Method: Composition-based stats.
 Identities = 226/599 (37%), Positives = 334/599 (55%), Gaps = 18/599 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF-- 59
           + +RTH+CG+L +SDV   V LSGWV R R  GG+ F+D+RD YGITQ+V N +      
Sbjct: 24  YMFRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELC 83

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +  E+V+ + G V  R ++  NANI TG IE+   ++ +L+ A   P  +    +
Sbjct: 84  ERANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMIPPFTIEDNTD 141

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + IR KYR+LDLRR+ +  N+  R ++   +R  + +  FIE  TP+L  S+PEGARD
Sbjct: 142 GGDDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARD 201

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D 
Sbjct: 202 FVVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDC 260

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVEQ+DI++T E + + +F+           F R+ + DA++ YG+DKPDLR  +  
Sbjct: 261 EMSFVEQEDIISTFEGMAKHLFKTLRGVELNE-PFQRMSWADAMKYYGSDKPDLRFGMKF 319

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLA 357
             + +      F VF     V                 R   D + E+ +    G  G+ 
Sbjct: 320 VELMDIMKGHGFSVFDNAAYVGG-----ICAEGAATYTRKQLDALTEFVKKPQIGAKGMV 374

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           Y   R++  G V     V K       + ++     + GD    ++GD + K      + 
Sbjct: 375 YA--RVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCEL 430

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     +   D  +
Sbjct: 431 RLEMGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAA 490

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD+V NG E+  G IR H +++  + F  +G + E  E +FG L  AF+ G PPH
Sbjct: 491 VRADAYDMVINGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAEAQFGFLMNAFKYGAPPH 550

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L +    
Sbjct: 551 GGLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQSQLDELNLIVDLKE 609


>gi|298206975|ref|YP_003715154.1| aspartyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849609|gb|EAP87477.1| aspartyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 582

 Score =  595 bits (1535), Expect = e-168,   Method: Composition-based stats.
 Identities = 221/592 (37%), Positives = 335/592 (56%), Gaps = 15/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
            YR+HSCG+L    +G+ V LSGWV +VR  G ++++D+RD YGITQ+V + +    EI 
Sbjct: 1   MYRSHSCGELNSDHIGNQVTLSGWVQKVRDKGFVVWVDLRDRYGITQLVFDEERTSLEIL 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +  E+V+   G V+ R  E+ N NI TG IE+  +++ +L+ A+  P  +  + +
Sbjct: 61  NRAQELGREFVIQAKGKVIER--ESKNKNIPTGDIEVLVEELTVLNAAKTPPFTIEDDTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR  + +N++ R ++  ++R  +    FIE  TP L  S+PEGARD
Sbjct: 119 GGEDLRMKYRYLDIRRTPVRENLIFRHKVTIAVRNYLSDLGFIETETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+F++Q+DILNT E +   + +E          F R+ YDDA++RYG DKPD+R  +  
Sbjct: 238 EMAFIDQEDILNTFEGLTTHLLKELKGVEVTE--FPRMTYDDAMKRYGNDKPDIRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             + E   H +F VF+    V                 R   D +  W +      L  +
Sbjct: 296 GELNEVAQHKDFGVFNSAELVVG-----IAVPGAASYTRKEIDALVNWVKRPQVGALGMV 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + + +E G  +    V K  +  +          + GD    ++GD  K  +  +  R  
Sbjct: 351 YVKCNEDG--SYKSSVDKFYDQEDLAKWAEVTGAKPGDLICVLSGDTHKVRTQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ L +   + F   W++DFP  EW+E+ K+    H+PFT P+ G   L   +   +KA
Sbjct: 409 MAERLELRKSDEFAPLWVIDFPLLEWDEDTKRYHAMHHPFTSPKPGQLELLETNPGEVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H S+     F  +G + E  + +FG L  AFQ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDSKTQALMFDYLGFTPEEAKAQFGFLMDAFQYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+V +L G + +R+   FP +    D+++ +P+ +  EQL+EL L++
Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNAGRDVMIDAPAKIDEEQLKELHLKL 580


>gi|240173264|ref|ZP_04751922.1| aspartyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 591

 Score =  595 bits (1535), Expect = e-168,   Method: Composition-based stats.
 Identities = 233/601 (38%), Positives = 332/601 (55%), Gaps = 26/601 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H  G L   D G  V L+GWV R R HGG+IF+D+RD  G+ QVV   D      A  
Sbjct: 3   RSHGAGSLRDRDAGQHVTLAGWVARRRDHGGVIFIDLRDASGVAQVVF-RDPQVLAQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R     N  I TG +E++A  + +L       LP   +    E +
Sbjct: 62  LRAEFCVTVCGVVELRPEGNANPEIATGDVEVNATALTVLGECAP--LPFQLDEPAGEEL 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRRD     I  R+++  + R  +   +F+E  TP +T S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRRDGPASAIRLRSKVNAAARDVLARHDFVEIETPTITRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDME+SFV
Sbjct: 180 RLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMELSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +DI+   E +L  ++E       +S    RI Y DA+RR+G+DKPD+R  + +   TE
Sbjct: 239 DAEDIIAISEEILTALWELIG--YRISTPIPRISYADAMRRFGSDKPDMRFGVELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 297 FFKDTTFRVFQAP------YVGSVVMPGGASQPRRTLDGWQEWAKQRGHRGLAYVL--VG 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L+    + +   +  + GD  FF AG P    +    AR+ IA  L
Sbjct: 349 EDGTLG--GPVAKNLSDSERDGLAAHVGAEPGDCIFFSAGPPKSSRALLGAARSEIAHRL 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
            +++ + + F W++D P +E  +E                 H+ FT P+   E    +D 
Sbjct: 407 DLVDPDAWAFVWVVDPPLFEPADEATAAGDVAVGSGAWTAVHHAFTAPKPEFEDRIDSDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S+ A  YD+VCNG EI  G +R H  +V  + F+ +G+ K   E +FG L  AF  G P
Sbjct: 467 GSVLADAYDIVCNGHEIGGGSVRIHRRDVQERVFAVMGLDKAEAEEKFGFLLEAFMFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRI  LL GA ++REV  FP +    D L  +P+ ++ +Q +E G+     
Sbjct: 527 PHGGIAFGWDRITALLAGADSIREVIAFPKTGGGVDPLTNAPAPITAQQRKESGIDAKPK 586

Query: 595 P 595
           P
Sbjct: 587 P 587


>gi|239616618|ref|YP_002939940.1| aspartyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239505449|gb|ACR78936.1| aspartyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 591

 Score =  595 bits (1535), Expect = e-168,   Method: Composition-based stats.
 Identities = 220/595 (36%), Positives = 347/595 (58%), Gaps = 12/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEI 61
           + RTH+CG+L     G  V L+GWV R+R  GGI F+ +RD YG TQVV +P +   ++ 
Sbjct: 2   KKRTHTCGELRSEHAGKTVVLNGWVDRIRDLGGIKFILLRDRYGFTQVVFDPSNEDVYKT 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+ + + G+V  R  + +N  + TG+IE+ A ++EILS ++  P+ V  + +  
Sbjct: 62  ALQLGIEYTISVTGIVRERPKDAVNPKMPTGKIEVLATEVEILSESDTPPIYVNIDDDSS 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E ++ KYR+L+LR+  + +NI+ R +++ ++R  +   NF+E  TP+LT S+PEGARDFL
Sbjct: 122 EELKLKYRYLNLRKPKMQRNIIFRHKVVQAVRNYLNKNNFLEIETPVLTKSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM +GFDRY+QIA C+RDED R+DR P EF Q+D+EM
Sbjct: 182 VPSRLRPGKFYALPQSPQLFKQLLMVAGFDRYYQIAKCYRDEDFRADRQP-EFTQIDLEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF + +D+   +E +L   F+E  N   ++  F R+ Y++A+  YG+D+PD R  + +H+
Sbjct: 241 SFADSEDVFAIVEGMLSHTFKETLNV-GLTTPFPRLTYEEAMEMYGSDRPDRRYGMELHD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V+E FV + FRV S+ L      + +         +R   D    + +  G  GL +I  
Sbjct: 300 VSEAFVGTGFRVISEALGRGEIVKGFLAKGLSSKFSRKRLDEYTAFVKENGLGGLIWIKV 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                        + KH      + +  R + + GD  F   G            R  + 
Sbjct: 360 ------EDELRSSILKHCPDE-IKKVVERFNAKIGDIIFLAIGKRETVSKALGKLREKLI 412

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAF 480
            E        F+  W+ DFP + +NEEE +I+  H+PFTMP  G ++     + L +++ 
Sbjct: 413 SE-EKPEVTGFDILWVTDFPMFSYNEEEGRIEAEHHPFTMPNLGDLDKFGKTEPLKVRSH 471

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+ASG +R H  ++  + F  +G++ E  + +FG L  AF+ G PPH GIA
Sbjct: 472 AYDLVINGYELASGSVRIHRRDIQNRIFEMIGLTHEEAQEKFGFLLEAFKYGPPPHAGIA 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+DR+V +++G  ++R+V  FP + +  D + G+PS VS  QL EL ++I++  
Sbjct: 532 FGLDRLVAIMVGTSSIRDVIAFPKAASGNDPMTGAPSEVSERQLEELRIKIIDEK 586


>gi|221194735|ref|ZP_03567792.1| aspartyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185639|gb|EEE18029.1| aspartyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 609

 Score =  595 bits (1535), Expect = e-168,   Method: Composition-based stats.
 Identities = 236/593 (39%), Positives = 346/593 (58%), Gaps = 10/593 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACF 59
           H   TH+CG+L   ++G  V L+GWV R R  GG++F+D+RD  G+TQV+ +PD  S  F
Sbjct: 25  HSMHTHTCGELRAENIGEIVTLTGWVWRRRDFGGLVFVDLRDREGLTQVLFDPDVASEAF 84

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A+ +R EW +CI G V  RS    N ++ TG++E+ A +IE+L+ A+  P  +    +
Sbjct: 85  KTAEGIRPEWPVCITGTVQHRSEGQTNESLATGEVEILASEIEVLNTAQTPPFQIENHID 144

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR++DLRR  + +N+  R+    ++R      +F E  TP L  S+PEGARD
Sbjct: 145 VNEDLRLRYRYVDLRRPRMARNLRLRSDFTFALREAFHKRDFTEVETPALFKSTPEGARD 204

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR+  GSFYALPQ+PQ  KQLLM  G +RY+Q+A CFRDED R+DR P EF Q+D 
Sbjct: 205 FLVPSRMQGGSFYALPQSPQLLKQLLMIGGVERYYQVAKCFRDEDLRADRQP-EFTQVDT 263

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV QDD+++ +E++L   F +      +     R+ Y DA+  YGTDKPD R  + +
Sbjct: 264 EMSFVTQDDVMSELEDILSDAFGKMG--IQMQTPLRRMQYWDAMDTYGTDKPDTRFGMEL 321

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           H+V+  F  S F++FS     +  Y         G   R+  D++ E A   G  GLA+I
Sbjct: 322 HDVSNIFQDSSFKLFSGAAHTDGQYVKAINARGAGSSPRSQIDKLGEVAAGFGAKGLAWI 381

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +R  E G+V   GP+AK  +    +A+R  ++ Q GD   F  G  L+        R H
Sbjct: 382 AYR--EDGSVG--GPIAKFFSADELDALRAEMEAQPGDLILFAVGARLETDEILGGMRLH 437

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ L  +     +F W+++FP + W+EE +     H PFT P      L   D LSI +
Sbjct: 438 MARVLE-VPREGHDFLWVVNFPLFHWDEETQSYASEHMPFTQPNEDQIDLLDADPLSIGS 496

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD V +GFE   GG+R H +++ L+    +G +KE  E +FG L  A   G PP GG 
Sbjct: 497 HTYDFVMDGFEAGGGGMRIHNADLQLRILEKLGFTKERAEAQFGFLMEALTYGAPPMGGF 556

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+ MLL GA ++R+V  FP + +  DL+  +PS V+ +QL+E+ LR +
Sbjct: 557 ALGLDRVCMLLAGADSIRDVMAFPKTTSGSDLMSAAPSPVTDDQLKEVSLRTL 609


>gi|188577440|ref|YP_001914369.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|238689554|sp|B2STK7|SYD_XANOP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|188521892|gb|ACD59837.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 588

 Score =  595 bits (1535), Expect = e-168,   Method: Composition-based stats.
 Identities = 224/596 (37%), Positives = 333/596 (55%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP------DSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV   P       +  
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVEPVAGDDASAEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A S+  E VL ++G+V +R A  +N  + TG++E+ A +I IL+ A    LP     
Sbjct: 62  FKVAASLGYEDVLQVEGVVRARHA--VNDKLRTGKVEVIATRISILNKAAP--LPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR  + +    R +++ ++R  + A +F +  TPILT ++PEGAR
Sbjct: 118 NPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E+++R +F+E  + + ++  F R+ + +A+RRYG+DKPDLR  + 
Sbjct: 237 MEFAFVRERDVQDFVEDMMRAIFKEVVDVD-LAAQFPRMTWAEAMRRYGSDKPDLRIALE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V E    SEF VF+   +   G         G   +R   D     A   G  GLAY
Sbjct: 296 LVDVAELVKSSEFPVFTAAANDADGRVAALRIPGGATLSRKQIDDYAAHAAKYGAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +L E+G V    P+AK        A+   +   +GD  FF AG   K   F    R 
Sbjct: 356 I--KLSETGEV--NSPIAKFFGEEAFAALLKHVGAGNGDIVFFGAGGYTKVSDFMGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +E  ++    +   W+ DFP +EW++E ++    H+PFT P     +    +  +  
Sbjct: 412 KAGKEFDLV-AEGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANARTAV 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGG
Sbjct: 471 SRGYDMVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA GIDRI  L+ G +++R+V  FP +    DL+  +PS ++ +QL E+ ++I   
Sbjct: 531 IAFGIDRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIAADQLAEVHVQIRAK 586


>gi|320537881|ref|ZP_08037795.1| aspartyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320145255|gb|EFW36957.1| aspartyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 610

 Score =  595 bits (1535), Expect = e-168,   Method: Composition-based stats.
 Identities = 238/596 (39%), Positives = 347/596 (58%), Gaps = 11/596 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF-- 59
              RTH+CG +   D+G  V L+GWV+R R  GGI F+++RD YG+TQVV + D++    
Sbjct: 23  EMKRTHTCGGIRKQDIGKNVVLNGWVYRKRDLGGIAFINLRDRYGVTQVVIDEDASVELK 82

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           ++   +R E+ + ++G+V +R    IN  + TG++E+   K+E+LS +E LP  +  +  
Sbjct: 83  DLTAKLRMEFCIAVEGVVRARPDTMINTAMSTGEVEVKVNKLEVLSKSEVLPFQIDEKTN 142

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LDLR +++ K+I+ R+R+  ++R       F+E  TP    S+PEGARD
Sbjct: 143 ANEDLRLRYRYLDLRSESMQKHIILRSRVSFAVREFFTNHGFLEIETPTFIKSTPEGARD 202

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  G FYALPQ+PQ YKQ+LM SGFDRYFQIA C+RDED R DR P EF Q+D+
Sbjct: 203 YLVPSRLYPGKFYALPQSPQLYKQILMVSGFDRYFQIARCYRDEDARGDRQP-EFTQIDV 261

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV +DD+L   E +++ VF++  N   +   F R+ YDDAI  YGTDKPDLR  + M
Sbjct: 262 EMSFVSRDDVLRITEEMMQFVFQKTMNIT-LPKTFERLSYDDAINLYGTDKPDLRFDMHM 320

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +         F VF+  L+     +   +P +    +R   + +   A+     GLA+ 
Sbjct: 321 QDAAFMAPLGSFSVFTDALAAGGSIKALVVPGQAEQYSRKKIEELEASAKIYKAKGLAWF 380

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADARN 418
                  G     G +AK       E I   L+ Q GD   F+A    K  C+     R+
Sbjct: 381 KV-----GEQKLEGGIAKFFEGKEKE-ITKTLNAQKGDLVLFVADPSHKTACTALGAVRS 434

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++L ++N N F F WI+DFP +EWNE+E+K D AH+ F+ PQ    +    +   +K
Sbjct: 435 KLGKDLNLLNPNEFRFVWIIDFPLFEWNEDEQKWDPAHHMFSAPQEKYLATLETNQAEVK 494

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YDLV NG+E+ASG IR H  E+  + F  VG  +   E +FG L  AF+ G PPHGG
Sbjct: 495 GDLYDLVLNGYELASGSIRIHDPELQKRIFKIVGFDESEAEAKFGFLTEAFKYGAPPHGG 554

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA G+DR+VML+ G  +++EV  FP +      +   PS V  +QL EL L+I + 
Sbjct: 555 IAPGLDRLVMLMAGETSIKEVIAFPKNTFAVGPMEDCPSLVDQKQLDELHLQIKDK 610


>gi|256545122|ref|ZP_05472488.1| aspartate--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256399163|gb|EEU12774.1| aspartate--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 585

 Score =  595 bits (1535), Expect = e-168,   Method: Composition-based stats.
 Identities = 215/594 (36%), Positives = 335/594 (56%), Gaps = 10/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CF 59
           M   R+H CG+L   ++G  V L GWV + R  G ++F+D+RD  GITQ+V   D    +
Sbjct: 1   MEFKRSHMCGELREENIGDEVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVTREDDNENY 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +IAK V  E+VL + G V  R  E+ N  I TG IE+ A KI IL  A+  P+ +  + +
Sbjct: 61  KIAKDVAGEYVLEVKGEVRER--ESKNPEIPTGNIEIIASKINILDKAKTPPIYIKEDDD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+++ KYR+LD+R+ ++ KN+  R+ I+  MR  M    F E  TP LT  +PEGARD
Sbjct: 119 VSENLKLKYRYLDMRKQSVQKNLKLRSDIVRCMREYMYDNGFTEVETPFLTKPTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVNQG FYALPQ+PQ  KQLLM    DRYFQI  CFRDED R++R P EF QLD+
Sbjct: 179 YLVPSRVNQGKFYALPQSPQLMKQLLMIGSLDRYFQIVKCFRDEDLRANRQP-EFTQLDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E+SF +QDD++   E +L+ +F+ F++ + +     R+ Y +A+  YG+DKPDLR    +
Sbjct: 238 ELSFADQDDVIKVNEGLLKTLFDNFTDYD-LKLPIQRMDYSEAMNSYGSDKPDLRYGYKI 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++E F   +F+VF+  +             + G  +R   D++ ++ +  G  GL++I
Sbjct: 297 NDISEIFKDCDFKVFTDNIKEGHSVRAINFKGQAGNYSRKQLDKLTDFVKDYGLKGLSFI 356

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +   +  N      + K L     + +  +LD+ D D     A             R  
Sbjct: 357 KFNSKDDIN----SSIKKFLTDEIVKNLIEKLDISDNDLILIGADKNKTVLEGLGALRRK 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A++  +     + FCW+++FP +E++EEE +    H+PFTMP      L   +   ++ 
Sbjct: 413 VAKDQNLYEKE-YAFCWVVNFPMFEYSEEEDRYVSQHHPFTMPNEEDIDLLLTEPEKVRT 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G +R +  E+  + F  + +S + +E +FG    A Q G PPH G+
Sbjct: 472 QAYDIVINGDEMGGGSVRINNQELQEKVFKALKLSDDDIEQKFGFFIEALQYGTPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DR+VML    +N++++  FP +Q+    L  +PS V  + L EL + + E
Sbjct: 532 AYGLDRLVMLFAKTENIKDIIAFPKTQSATCPLTQAPSIVDEKSLNELSIEVKE 585


>gi|87123423|ref|ZP_01079274.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetases, class I
           [Synechococcus sp. RS9917]
 gi|86169143|gb|EAQ70399.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetases, class I
           [Synechococcus sp. RS9917]
          Length = 606

 Score =  595 bits (1535), Expect = e-168,   Method: Composition-based stats.
 Identities = 220/604 (36%), Positives = 339/604 (56%), Gaps = 26/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL    +   V+L GWV R R HGG+IF+D+RD  G  QV  +PD  +  F +A
Sbjct: 2   RSNGCGDLRKQQIDDQVQLCGWVDRRRDHGGVIFIDLRDRSGTVQVTVDPDLGAEAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           + +RSE VL + G V +R  E+ N  + TG +E+ A  I +L+  +     P+ +  E  
Sbjct: 62  EHLRSESVLQVAGTVRARPEESRNERLTTGDVEVLASSITVLNGVKGTLPFPVSIHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR  ++ N+  R   I + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAHTIQTARRFLEDEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLDM
Sbjct: 182 YILPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++QD+IL+  E ++  +++       +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQDEILDLNERLISSIWKAVKGVE-LPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
            NV++      F+VFS  +      +  A+P      +         +   A+  G  GL
Sbjct: 300 TNVSDIVASMGFKVFSGAVKAGGSVKCIAVPGGNDAVSNVRIKPGGDVFSEAQQAGAGGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  R+ E G++  +G +  +L+    + +  R   + G    F AGD           
Sbjct: 360 AFI--RVREGGDIDTIGAIKDNLSEEQKQELLSRTGAEAGTLLLFGAGDTATVNKALDRV 417

Query: 417 RNHIAQELGIINCN----CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
           R  +A+ELG++  +     + F W++DFP +E+N +E +++  H+PF  P G      G+
Sbjct: 418 RQVLARELGLVPADRNNDQWNFLWVVDFPMFEFNADENRLEALHHPFCAPNGND---LGS 474

Query: 473 DLLS-------IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
           D  +        +A  YDLV NG E+  G +R H S +  Q    +G+ +   + +FG L
Sbjct: 475 DPAAWAETLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLKTIGLPEAEAKEQFGFL 534

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             A   G PPHGG+A G+DR+VMLL G +++R+   FP +Q    L+  +P+ VS  QL 
Sbjct: 535 IEALDMGAPPHGGLAFGLDRMVMLLAGEESIRDTIAFPKTQQARCLMTAAPAGVSDRQLE 594

Query: 586 ELGL 589
           EL +
Sbjct: 595 ELHV 598


>gi|190570818|ref|YP_001975176.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|238064674|sp|B3CPJ5|SYD_WOLPP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|190357090|emb|CAQ54495.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 600

 Score =  595 bits (1535), Expect = e-168,   Method: Composition-based stats.
 Identities = 292/606 (48%), Positives = 407/606 (67%), Gaps = 19/606 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+ Y+TH C +L  +DV   V LSGW++R R HG +IF+D+RD +GITQ+V N D   F+
Sbjct: 1   MNCYKTHECNELRKNDVEKEVTLSGWLYRKRDHGNLIFVDLRDFHGITQLVFNNDKDFFD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE------------ 108
              +++SE V+ + G+V +R+ +T+N++I TG+IE+    +++ S  E            
Sbjct: 61  EISNLKSESVITVTGIVKARTEDTVNSSISTGEIEVIVSNLQVESEVEFHCDEEIAKEER 120

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
            +   + GE+EYPE++RFKYRFLDLRR+ +  NI+ R++II+ +R  MI + F++  TPI
Sbjct: 121 SILASIAGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIISELRRLMIEQGFLDIQTPI 180

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D
Sbjct: 181 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARAD 240

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           R PGEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F RI Y +A+ +YG+
Sbjct: 241 RSPGEFYQLDLEMSFVTQEDIFQVIESTLYKVFAKFS-RKSVDKDFPRITYKEAMLKYGS 299

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           DKPDLRNP+++ +VTE F  SEF +F   +           P K     R+F D+  E A
Sbjct: 300 DKPDLRNPLLISDVTEIFRDSEFNIFKSNIERGMVVRAIPAP-KTAEEPRSFFDKKIEHA 358

Query: 349 -RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407
            +  G  GL YI +  D        GP+AK L+     +I+   +++ GDS FF +    
Sbjct: 359 QKEFGAKGLGYITFDKDGIAK----GPIAKFLDDNRLNSIKEITNVKPGDSVFFASDKEN 414

Query: 408 KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
           +  + A   R  +  ELG+I+ + F+FCWI+DFP++ ++++ KKIDF HNPF+MP GG++
Sbjct: 415 EAATIAGKVRTLLGSELGLIDDDIFKFCWIIDFPYFVYDDKSKKIDFFHNPFSMPHGGLK 474

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
            L+  D L I A+QYDLVCNG E++SG IRN+   +M +AF+  G SKE V+ +FG L R
Sbjct: 475 DLEEKDPLDILAYQYDLVCNGIELSSGAIRNNKLNIMYRAFAIAGYSKEEVDTKFGALVR 534

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPHGGIA G+DR+VMLL    N+REV  FPM+Q   D+LMG+PS V  + LREL
Sbjct: 535 AFRFGAPPHGGIAPGVDRMVMLLADEPNIREVICFPMNQQGEDVLMGAPSKVDDKHLREL 594

Query: 588 GLRIVE 593
            L++VE
Sbjct: 595 SLKVVE 600


>gi|302559582|ref|ZP_07311924.1| aspartyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302477200|gb|EFL40293.1| aspartyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 587

 Score =  595 bits (1535), Expect = e-168,   Method: Composition-based stats.
 Identities = 295/597 (49%), Positives = 402/597 (67%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTEAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E V+ +DG V+SR  E +NA + TG++E+    +E+L  A  LP  +  E   
Sbjct: 61  ALDKLSKETVVRVDGKVVSRGTENVNAELPTGEVEVEVSVVEVLGEAAPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I++MR +M A  F E +TPIL+A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNILLRTSVISAMRHKMTAMGFNEMATPILSATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF NG  V++ F R+ + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRVPFREAMLKYGSDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F  SEF+ F+        +          G  R F D++ ++A SQG  GLA++ 
Sbjct: 301 DITDVFEGSEFKAFA------GKHVRALPVPDVSGQPRKFFDQLGDYAVSQGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G+++  GP+AK L   N   +  RL +  G + FF AG+  +        R   
Sbjct: 354 -RVAEDGSLS--GPIAKFLTEANVAELTKRLSLAPGHAVFFGAGEFDEVSKIMGAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G    N F FCWI+DFP YE +EE   IDF+HNPF+MPQGG+E+L+  D L I  +
Sbjct: 411 AKRAGHFEENVFRFCWIVDFPMYEKDEETGAIDFSHNPFSMPQGGLEALETQDPLDILGW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  E+ML+AF   G  +E VE +F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGVELSSGAIRNHEPEIMLKAFEIAGYERETVEEKFAGMLRAFRFGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL L + +   K
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELEEARLRELHLTVRKPQPK 587


>gi|319953296|ref|YP_004164563.1| aspartyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421956|gb|ADV49065.1| aspartyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 584

 Score =  595 bits (1534), Expect = e-168,   Method: Composition-based stats.
 Identities = 227/594 (38%), Positives = 337/594 (56%), Gaps = 19/594 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACF 59
            YR+HSCG+L  ++    V LSGWV +VR  G +I+ D+RD YGITQ++ + +    A  
Sbjct: 1   MYRSHSCGELRATNNNQEVILSGWVQKVRDKGFVIWADLRDRYGITQLIFDEERTSKALL 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A+S+  E+V+ I G V+ R+++  N+NI TG IE+  +++ +L+ A   P  +  + +
Sbjct: 61  EQARSLGREFVIQIKGTVIERASK--NSNIPTGDIEILVKELTVLNKALVPPFTIEDKTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR KYR+LD+RR+ +  N++ R ++   +R  +  E FIE  TP L  S+PEGARD
Sbjct: 119 GGEDIRMKYRYLDIRRNPVKNNLIFRHKVAMEVRKFLSDEGFIEVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DILN  EN+ + + +E       S  F R+ YDDA+R YG DKPD+R  +  
Sbjct: 238 EMAFVEQEDILNIFENLTKYLLKEVKGFEIDS--FPRMTYDDAMRTYGNDKPDIRFDMKF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             +     H EF +F+    V                 R   D + +W R    G  G+ 
Sbjct: 296 GELNNVAQHKEFGIFNDAELVVG-----IAVPGAATYTRKEIDALIDWVRRPQVGAKGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y  +  D     +    V K  +  +        + + GD    ++GD  K  +  +  R
Sbjct: 351 YAKYNEDG----SFKSSVDKFYDQEDLAKWAEVTNAKPGDLICVLSGDANKTRTQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ LG+ N   F   W++DFP  E +EE       H+PFT P+ G   L   D  ++
Sbjct: 407 MELAERLGLRNPEEFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDTDPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA  YDLV NG EI  G IR H  ++    F ++G + E  + +FG L  AFQ G PPHG
Sbjct: 467 KANAYDLVLNGNEIGGGSIRIHDKDMQATMFKHLGFTPEEAKAQFGFLMDAFQYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR+V +L G + +R+   FP + +  D+++ +P+ +   QL+EL L++
Sbjct: 527 GLAFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAKIDEVQLKELHLKL 580


>gi|306836216|ref|ZP_07469200.1| aspartate--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567937|gb|EFM43518.1| aspartate--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 608

 Score =  595 bits (1534), Expect = e-168,   Method: Composition-based stats.
 Identities = 235/606 (38%), Positives = 329/606 (54%), Gaps = 27/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L        V L+GWV R R HGG+IF+D+RD  GI QVV   +S   E A  
Sbjct: 3   RTHLAGELRKELAEETVTLTGWVSRRRDHGGVIFIDLRDRSGIAQVVF-RESDVAERAHD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYP 121
           +RSE+ + + G+V  R   + N N+ +G IE++   +E+L+ +  LP  V       E  
Sbjct: 62  LRSEYCVKVIGVVEPRPEGSENPNLPSGDIEVNVTDLEVLNKSAALPFQVDDPSASGEVG 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR+   K +  R+    + R  +   +F E  TP LT S+PEGARDFL
Sbjct: 122 EETRLKYRYLDLRRERQAKALRLRSAANRAARNVLDKHDFAEIETPTLTRSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EM
Sbjct: 182 VPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E +++ +++       +     R+ Y DA++ YG+DKPDLR  I +  
Sbjct: 241 SFVDQDDVIALGEEIVKELWKLIG--YDIQTPIPRMTYADAMKYYGSDKPDLRFDIKIVE 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAYI  
Sbjct: 299 CTEFFKDTTFRVFQN------EYVGAVVMDGGASQPRRQFDAWQDWAKQRGAKGLAYIT- 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G +   GPVAK++     E I   +  + GD+ FF AGD     +    AR  IA
Sbjct: 352 -VAEDGTLG--GPVAKNITDAEREGIAEHVGAKPGDAIFFAAGDTKSSRALLGAARGEIA 408

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGMESLKG 471
           ++L +I    + F W++D P +E + +            K    H+ FT P+        
Sbjct: 409 KKLDLIKEGDWAFTWVVDAPLFEPSADATASGDVALGHSKWTAVHHAFTSPKPEWIDSFD 468

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            +     A+ YD+VCNG EI  G IR H  +V  + F  +GI  E  + +FG L  AF  
Sbjct: 469 ENPGEATAYAYDIVCNGNEIGGGSIRIHQEDVQKRVFEVMGIGDEEAQEKFGFLLDAFSY 528

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ +   Q +E G+  
Sbjct: 529 GAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPIPAAQRKETGVDF 588

Query: 592 VENPKK 597
               KK
Sbjct: 589 KPEKKK 594


>gi|163782929|ref|ZP_02177924.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881609|gb|EDP75118.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 603

 Score =  595 bits (1534), Expect = e-168,   Method: Composition-based stats.
 Identities = 228/606 (37%), Positives = 351/606 (57%), Gaps = 23/606 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACF 59
           +  R   CG++ + D+   + L GWVHRVR HGG++F+D+RD  GI QVVA    +   +
Sbjct: 7   NFKRDKYCGEVSLEDIDRELNLCGWVHRVRNHGGVVFIDLRDREGIVQVVAEESSNPTAY 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  V+ EWV+ I G V  R   T N  + TG +E+ A+ I + + +E  P PV  E  
Sbjct: 67  EKADRVKPEWVVGIRGKVRRRPEGTENPKLKTGYVEVVAEDIRVFNTSEVPPFPVEEETN 126

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E ++ KYR++DLRR ++ +N++ R +     R     E F+E  TP LT S+PEGARD
Sbjct: 127 VSEELKLKYRYIDLRRFSMMENMLFRHKFYQLTRRFFEEEGFVEIETPFLTKSTPEGARD 186

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR++ G FYALPQ+PQ +KQ+LM SGFDRYFQ+  CFRDED R+DR P EF Q+D 
Sbjct: 187 FIVPSRLHPGKFYALPQSPQLFKQILMVSGFDRYFQVVKCFRDEDLRADRQP-EFTQIDY 245

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV +DD++   E ++  +F+E      +S  F R+ Y + + R+G+DKPD R  + +
Sbjct: 246 EMSFVNEDDVIGVAERLVAHLFKELLGVE-LSTPFERLPYGEVMERFGSDKPDRRFGLEL 304

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +++ F ++EF+VF  +L      +  AI  KG   +R   D +  + +  G  GLA+I
Sbjct: 305 IELSDIFKNTEFKVFKGVLDKGGIIK--AINFKGSNLSRKEIDDLTRFVQKLGAKGLAWI 362

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E+G +  + P+ K  +   TE +  R+  ++GD  FF A             R  
Sbjct: 363 KV---EAGKL--VSPIVKFFSEEETENLLERVKAEEGDVIFFSADSKEMVYKVLGALRLE 417

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-----ESLKGNDL 474
           +A+  G+I+ + ++  W++DFP  EW+EEE +    H+PFT P+        E+LK +D+
Sbjct: 418 LAKSHGLIDESRWDVLWVVDFPLMEWDEEEGRFVSLHHPFTAPREEDIPKLKEALKTDDI 477

Query: 475 L-------SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                   S++A  YDLV NG E+  G IR H +++    F  + I +   + +FG L  
Sbjct: 478 EERKRLVHSVRARAYDLVINGEEVGGGSIRIHTTDLQEVVFKLLDIGEVEAQEKFGFLLE 537

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           A + G PPHGG+A G+DR+V L+ G  ++R+V  FP +Q    +L  +P  V+ +QL+E+
Sbjct: 538 ALRFGAPPHGGLAFGLDRLVALMRGLDSIRDVIAFPKTQKGICMLTSAPDYVTPKQLKEV 597

Query: 588 GLRIVE 593
            +++ E
Sbjct: 598 HIKVSE 603


>gi|326329820|ref|ZP_08196140.1| aspartate--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325952406|gb|EGD44426.1| aspartate--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 594

 Score =  595 bits (1534), Expect = e-168,   Method: Composition-based stats.
 Identities = 234/595 (39%), Positives = 330/595 (55%), Gaps = 29/595 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    VG  V L+GWV R R HGG+ FLD+R+  G+ QVV   +    EIA +
Sbjct: 3   RTHDAGTLRAEHVGQTVTLAGWVGRRRDHGGVAFLDLREASGVVQVVVRDE----EIAHA 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V++R+ E  N N+ TG+IE+ A+ +E+LS A  LP P+    E  E +
Sbjct: 59  LRNEYCIKVTGEVVARTEENRNPNLATGEIEVVAKDLEVLSAAAPLPFPIDDHVEVGEDV 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R+K+R+LDLRR      I  R++   + R  + A +F+E  TP LT S+PEGARDFLVP+
Sbjct: 119 RYKHRYLDLRRTAPGNAIRLRSKANKAARDVLAAHDFVEIETPTLTRSTPEGARDFLVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+Q+A  +RDED R+DR P EF QLD+EMSFV
Sbjct: 179 RLQPGSWYALPQSPQLFKQLLMVGGMERYYQLARAYRDEDFRADRQP-EFTQLDIEMSFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E ++  +++       V     R+ Y DA+ +YG+DKPDLR  I +   T+
Sbjct: 238 EQDDVIALGEEIVAALWKLIG--YDVPLPLPRMTYADAMAKYGSDKPDLRFGIEITECTD 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAY+  + D
Sbjct: 296 YFSETTFRVFQAP------YVGAVVMPGGASQPRRQLDGWQDWAKQRGAKGLAYVLVQED 349

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
                +  GPVAK+L+      +   +    GD  FF AG P    S    AR  I   L
Sbjct: 350 G----SLTGPVAKNLSETEAAGLAAHVGANPGDCIFFAAGAPKSSRSLLGAARLEIGNRL 405

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDL 474
            +     + F W++D P  E   E            +    H+ FT PQ         D 
Sbjct: 406 DLRKDGEWSFLWVVDAPLLEPASEAVESGDVAVGAGEWTAVHHAFTSPQ--DVESFDKDP 463

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A+ YD+VCNG EI  G IR H  +V  + F  +GI +E  E +FG L  AF+ G P
Sbjct: 464 GNAIAWAYDIVCNGNEIGGGSIRIHREDVQKRVFDLMGIGEEAAEEKFGFLLEAFKFGAP 523

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PHGGIA G DR+V LL G  ++R+V  FP +    D L  +P+ ++ EQ +E G+
Sbjct: 524 PHGGIAFGWDRVVALLAGTDSIRDVIAFPKTGAGYDPLTAAPAPITPEQRKEAGV 578


>gi|325955285|ref|YP_004238945.1| aspartyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437903|gb|ADX68367.1| aspartyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 589

 Score =  595 bits (1534), Expect = e-168,   Method: Composition-based stats.
 Identities = 218/603 (36%), Positives = 341/603 (56%), Gaps = 23/603 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACF 59
            +RTH+CG L  +++   V LSGWV  +R  G ++++D+RD YGITQ++ + D   +  F
Sbjct: 1   MFRTHTCGQLTQANINEKVTLSGWVATLRDKGFMLWIDLRDRYGITQIILDEDRSSTELF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +  E+V+ + G V+ R+A+  N  + TG+IE+ A++I+IL+ +   P  +  + +
Sbjct: 61  ETALLLGREYVIQVTGTVIERTAK--NPQLATGEIEILAEEIKILNESALPPFTIEDQTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR+ +   ++ R+++   +R  + A++F+E  TP+L  S+PEGARD
Sbjct: 119 GGEDLRMKYRYLDIRRNPVKDKLIFRSKVAQEVRKYLDAQDFVEVETPVLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNPGQFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVEQ+DI+   E + + + + F N +     F R+ Y +A++RYG DKPD+R  +  
Sbjct: 238 EMSFVEQEDIIEVFEGLTKHLLKTFKNLDF--EQFPRMTYAEAMKRYGNDKPDIRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             +T+      F VF     V                 R   D++ +W +    G  GL 
Sbjct: 296 AEITDLAQGKGFSVFDDQELVVGIAAEQC-----NSYTRKDIDKLIDWVKRPQIGASGL- 349

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
            I+ R +E G       V K     +  A   R++ + GD    ++G   K     +  R
Sbjct: 350 -IWVRCNEDG--TYKSSVDKFFTEDDLAAWAKRMNAKPGDLLLIMSGKGDKVRGQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             I + LG+   + F   W++DFP  EW++E ++    H+PFT P+     L   +   +
Sbjct: 407 MEIGERLGLRKPDEFAPLWVVDFPLLEWDDETQRYYAMHHPFTSPKVEDYDLIKTNPGEV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG EI  G IR    ++  + F  +G S E  E +FG L  AF+ G PPHG
Sbjct: 467 RANAYDLVLNGNEIGGGSIRIFDRKLQAEMFELLGFSPEQAEAQFGFLMNAFKYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI----VE 593
           G+A G DR+V +L G++ +R+   FP + +  D+++ +P+ +   QL EL ++I     +
Sbjct: 527 GLAFGFDRLVSILDGSETIRDYIAFPKNNSGRDVMIDAPAKIDEAQLEELSIKIDLPSTD 586

Query: 594 NPK 596
            PK
Sbjct: 587 EPK 589


>gi|153810160|ref|ZP_01962828.1| hypothetical protein RUMOBE_00541 [Ruminococcus obeum ATCC 29174]
 gi|149833339|gb|EDM88420.1| hypothetical protein RUMOBE_00541 [Ruminococcus obeum ATCC 29174]
          Length = 600

 Score =  595 bits (1534), Expect = e-168,   Method: Composition-based stats.
 Identities = 228/590 (38%), Positives = 341/590 (57%), Gaps = 12/590 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFE 60
           +RT  C ++    VGS V L GWV + R  GG++F+D+RD  GI QV+      D   FE
Sbjct: 9   HRTCRCAEVTKDMVGSKVTLMGWVQKARNKGGLVFVDLRDRSGIMQVIFENGSIDQEGFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ + G V +R    +N N+ TG +EL A+ + IL+ +E  P P+    + 
Sbjct: 69  KAGKLRSEFVIAVTGTVENR-GGAVNENLATGALELRAESLRILAESEVPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  L +N++ +++++   R     E F+E  TP+L  S+PEGARD+
Sbjct: 128 KDEIRLKYRYLDLRRPDLQRNLMMKSKVMMLTRKFFTDEGFLEVETPMLGKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ GSFY LPQ+PQ YKQLLM SG+DRY QIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRIHPGSFYGLPQSPQLYKQLLMCSGYDRYIQIARCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E  L  +F+E  + + V     RI + +A+ R+G+DKPD+R  + +H
Sbjct: 247 LSFVDVDDVIDVNERFLAYLFKEVLDVD-VKLPIQRITWQEAMDRFGSDKPDMRFGMELH 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+E      F VF   L             +G    R   D++ ++A++ G  GLAYI 
Sbjct: 306 DVSEVVKDCGFVVFKNALEAGGSVRGINAEGQG-SMPRKKIDKLVDFAKTYGAKGLAYIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D           AK +     +A+   ++ + GD   F A             R  +
Sbjct: 365 IAEDG----TRKSSFAKFMTEEEMDALVQAMEGKPGDLLLFAADKNKVVYDVLGALRVEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN-DLLSIKA 479
           A+++ +++ N + F W+ +FP  EW+EEE +    H+PFTM       L  + DL  I+A
Sbjct: 421 AKQMDLLDKNEYRFVWVTEFPLLEWSEEENRYTAMHHPFTMLMEEDIPLIESGDLGKIRA 480

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G +R H +++  + F  +G +K+    +FG L  AF+ G+PPH G+
Sbjct: 481 KAYDIVLNGNEIGGGSVRIHQNDIQEKMFEMLGFTKDAAYKQFGFLLNAFKYGVPPHAGL 540

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           A G+DR+VML+    ++R+V  FP  ++   L+  SPS VS +QL ELGL
Sbjct: 541 AYGLDRLVMLMAKVDSIRDVIAFPKVKDASCLMTESPSVVSEQQLEELGL 590


>gi|281422425|ref|ZP_06253424.1| aspartate--tRNA ligase [Prevotella copri DSM 18205]
 gi|281403488|gb|EFB34168.1| aspartate--tRNA ligase [Prevotella copri DSM 18205]
          Length = 586

 Score =  595 bits (1533), Expect = e-168,   Method: Composition-based stats.
 Identities = 221/601 (36%), Positives = 339/601 (56%), Gaps = 22/601 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YR+++CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   +    +
Sbjct: 1   MYRSNTCGELRLSDAGKEVTLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNEADNKDLCD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + I G+V  R ++  N  + TG IE+  +++ +LS ++  P  +    + 
Sbjct: 61  AANKLGREFCIQIKGVVSERQSK--NPKMDTGDIEILVKELNVLSQSQTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  + KN+  R R+   +R  + A+NF+E  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRPAVRKNLELRHRMCILIRNFLDAQNFMEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++N  E + R +F+E            ++ + DA+RR+G+DKPDLR  +   
Sbjct: 238 MSFVDQDDVINLFEEMARHLFKEIRGVELPKL--EQMTWHDAMRRFGSDKPDLRFGMEFV 295

Query: 301 NVTEHFVHSE-FRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWAR--SQGQPGL 356
            + + F     F VF +   +        I   G     R   + + ++ +    G  GL
Sbjct: 296 ELKDAFTGKGNFSVFDEAKYIGG------ICVPGCADYCRKQLNELTDFVKRPQVGAKGL 349

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAAD 415
            YI +  D          + K  +      I+  +  +DGD    ++GD   K       
Sbjct: 350 VYIKYNADG----TVKSSIDKFYSPEELAEIKTVMGAKDGDLVLILSGDNANKTRIQLCS 405

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L      
Sbjct: 406 LRLEMGDRLGLRDKNVFKCLWIIDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPE 465

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            ++A  YD VCNG E+  G +R H +++  + F  +G + E  E +FG L  AF+ G PP
Sbjct: 466 QVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAPP 525

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           H G+A G+DR V ++ G  ++R+   FP + +  D+++ +PS +  +QL EL +++    
Sbjct: 526 HAGLAFGLDRFVSIMAGLDSIRDCIAFPKNNSGRDVMLDAPSELDPKQLDELEIKLDLKA 585

Query: 596 K 596
           +
Sbjct: 586 E 586


>gi|332519166|ref|ZP_08395633.1| aspartyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332045014|gb|EGI81207.1| aspartyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 582

 Score =  595 bits (1533), Expect = e-168,   Method: Composition-based stats.
 Identities = 219/592 (36%), Positives = 335/592 (56%), Gaps = 15/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACF 59
            YR+H+CG+L    + + V LSGWV + R  G I+++D+RD YGITQ+V + +       
Sbjct: 1   MYRSHNCGELTTKHINTEVTLSGWVQKSRDKGFIVWVDLRDRYGITQLVFDEERTSKDML 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A+S+  E+V+ + G V+ R+++  N N+ TG IE+   ++ IL+ A   P  +  + +
Sbjct: 61  EKAQSLGREFVIQVKGTVIERASK--NPNLPTGDIEILVSELIILNEALLPPFTIEDKTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR KYR+LD+RR+ + ++++ R ++  ++R  +  + FIE  TP L  S+PEGARD
Sbjct: 119 GGEDIRMKYRYLDIRRNPVKESLIFRAKVTQAVRNYLSNDGFIEVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGEFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DILN  E + R + +E +        F R+ YDDA+R YG DKPD+R  +  
Sbjct: 238 EMAFVEQEDILNVFEGLTRHLLKEVNGVEIDK--FPRMLYDDAMRLYGNDKPDIRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             + E   H EF VF+    V            G    R   D++ +W +      L  +
Sbjct: 296 GELNEVTQHKEFGVFNNAELVVG-----IAVPGGNSYTRKEIDKLIDWVKRPQVGALGMV 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R ++ G  +    V K  +  +          + GD    ++GD  K  +  +  R  
Sbjct: 351 YSRCNDDG--SFKSSVDKFYDQEDLAKWAEVTSAKPGDLVCILSGDKNKVRAQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ LG+ +   F   W++DFP  E +EE       H+PFT P+ G   L       +KA
Sbjct: 409 LAERLGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQIELLDTKPGEVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H          ++G S++  + +FG L  AF+ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKATQAIMLKHLGFSEKEAKAQFGFLMDAFEYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+V +L G + +R+   FP + +  D+++ +P+ +  EQL+EL L++
Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAPIDSEQLKELNLKL 580


>gi|86158955|ref|YP_465740.1| aspartyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|97196505|sp|Q2IKX7|SYD_ANADE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|85775466|gb|ABC82303.1| aspartyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 603

 Score =  595 bits (1533), Expect = e-168,   Method: Composition-based stats.
 Identities = 221/602 (36%), Positives = 336/602 (55%), Gaps = 16/602 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTHSCG+L  +D+G  V L GWV+  R HGG +F+D+RD  G+TQVV   D      E+
Sbjct: 9   KRTHSCGELTKADIGKEVVLFGWVNNRRDHGGAVFIDLRDRAGLTQVVFEEDVRPDVHEL 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +R E+ + + G V+SR    +N  + TG+IE+ A  +EI + +E  P  +  + +  
Sbjct: 69  AGQLRLEYCVGVRGKVVSR-GGNVNPKLPTGEIEVHASDLEIFNRSEPAPFQIEDKIDTG 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R +YR+LDLRR  L + ++ R ++ +  R     + F+E  TP +   +P GAR+FL
Sbjct: 128 EEKRLQYRYLDLRRAPLQQTLMTRAKVNHLTRNYFTDKGFLELETPFMVKYTPGGARNFL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYAL ++PQ +KQL M +GFDRYFQI  CFRDED R DR P EF Q+D+EM
Sbjct: 188 VPSRLNPGKFYALAESPQLFKQLYMMAGFDRYFQIVRCFRDEDLRLDRQP-EFTQIDVEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI---I 298
           SFVEQ+D+ + ME ++  +++E          F R+ +++++ +YG DKPDLR  +   +
Sbjct: 247 SFVEQNDVFDVMEGLVVKLWKEVLGIEI-PRPFQRMPFEESMAKYGNDKPDLRFDMPHVV 305

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + ++          +  + +      +   +PA     +R   D++ E+ +  G  GLA 
Sbjct: 306 LTDLVRQHDGGGVPLMHEAVKAKGIVKAMRVPA-SANFSRTEIDKLEEYVKGMGAKGLAR 364

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                   G      P+AK +     +AI    + + GD   F  G      +  A+ R 
Sbjct: 365 AKV---GEGGEWTQSPLAKTITPALRQAINDACEAKAGDLLLFQFGKESVVHTVMANLRV 421

Query: 419 HIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           H+A+ +G+I        + F W+++ P +E++EE  +   AH+ FT P         +D 
Sbjct: 422 HLAKRMGLIPEYGSGGAWRFLWVVNPPLFEYDEESGQWAAAHHAFTRPHDSDLQFLESDP 481

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             +  ++YDLV NGFEI  G IR H  EV  + F  +GIS E   ++FG L  A + G P
Sbjct: 482 GKVNCYRYDLVLNGFEIGGGSIRLHDPEVQARVFKAMGISDEEARSKFGFLLDALKMGAP 541

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL GA+++R+V  +P +Q   DL+ G+P  V   QLREL ++    
Sbjct: 542 PHGGIALGMDRLVMLLTGAESLRDVVAWPKTQKGTDLMTGAPGDVDARQLRELYVKSTFE 601

Query: 595 PK 596
           PK
Sbjct: 602 PK 603


>gi|255526676|ref|ZP_05393581.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296187181|ref|ZP_06855578.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255509656|gb|EET85991.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048216|gb|EFG87653.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 591

 Score =  595 bits (1533), Expect = e-168,   Method: Composition-based stats.
 Identities = 224/591 (37%), Positives = 340/591 (57%), Gaps = 13/591 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
            RT  CG+L  + VG+   + GWV R R  GG+ F+D+RD  GI QVV     +   FE 
Sbjct: 9   KRTIMCGELRETHVGNKYTVMGWVQRRRNLGGLEFVDLRDRSGILQVVFGEEINKEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A +VRSE+ + + G ++ R A   N ++ TG +EL  + I+ILS +E  P+ +    +  
Sbjct: 69  ANTVRSEYCIAVTGTLVKREAA--NKDLPTGMVELKGESIKILSESETPPIYIKENLDAA 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + K  + R +    +R  +    F+E  TPIL  S+PEGARD+L
Sbjct: 127 ENIRLKYRYLDLRRPDMQKIFMIRHKAGKVVRDFLDQNGFLEMETPILGKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNFPGKFYALPQSPQLFKQLLMVSGYDRYFQIAKCFRDEDLRANRQP-EFTQIDMEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE+DD++   E +++ VF+E +  + V     R+ Y  A+ +YG+DKPDLR  + +++
Sbjct: 246 SFVEEDDVMELNERLVQKVFKEIAGVD-VKLPIERMPYKVAMEKYGSDKPDLRFGMEIND 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E     +F+VF   L+          P       R   D++ ++ ++ G  GL ++ +
Sbjct: 305 ISETVKDIDFKVFQDALANGGSVRAIKAP-NCASMGRKQIDKLVDFVKTYGAKGLVWVAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D          +AK +N   T+A+  ++  + GD    +A             R H+A
Sbjct: 364 KED-----GIKSSIAKFMNEEQTKAVLDKIQAKVGDLVLVVADKNSVVFQSLGALRLHMA 418

Query: 422 QELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           +E GI+ N N + F W+ +FP + +NEEE++    H+PFT P         +D   ++A 
Sbjct: 419 KETGILENNNEYRFVWVTEFPLFSYNEEEQRFQAEHHPFTAPMDEDIQYLESDPGRVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  ++  +    +G ++E   N FG L  AF+ G PPHGG+A
Sbjct: 479 AYDIVLNGEELGGGSIRIHDIKLQEKMLKVLGFTEERAWNSFGFLLEAFKFGAPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G DR++M L G +N+++V  FP +QN    L  +P+ V   Q++ELG+ I
Sbjct: 539 YGFDRMIMFLAGTENIKDVIAFPKNQNAFCPLTEAPNVVEETQIKELGINI 589


>gi|189184699|ref|YP_001938484.1| aspartyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|238692025|sp|B3CV53|SYD_ORITI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189181470|dbj|BAG41250.1| asparaginyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 597

 Score =  595 bits (1533), Expect = e-168,   Method: Composition-based stats.
 Identities = 305/601 (50%), Positives = 408/601 (67%), Gaps = 11/601 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH+YRTH+CG+L ++ VG  V+LSGW++R R HGG++F+D+RDHYGI Q+V N D +  +
Sbjct: 1   MHKYRTHTCGELNLAHVGLQVKLSGWLYRRRDHGGLLFIDLRDHYGIIQLVFNDDCSIIQ 60

Query: 61  -IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
                ++ E V+ ++G V++RS ETIN NI TG +E+      + S AEELPL + GE E
Sbjct: 61  AEISKIKFETVITVEGTVIARSNETINKNISTGDVEVVVSSYVVESFAEELPLQINGEYE 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R KYRFLDLR   LH+NIV R+++I  +R +M++  FIE  TPILTASSPEGARD
Sbjct: 121 APEETRLKYRFLDLRGARLHQNIVLRSKVIQELRNQMLSNGFIEFQTPILTASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRLHPGKFYALPQAPQQFKQLIMMSGFDKYFQIAPCFRDEDARADRSPGEFYQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FV Q+D+   +E VL   F++FSN +     F RI YD+++ RYG+DKPDLRNPI +
Sbjct: 241 EMAFVTQEDVFGLVEPVLYNTFKKFSNYSITDIPFPRITYDESMLRYGSDKPDLRNPIQI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VT+ F  SEF      ++          P       R+F D+M E+A+  G  GLAYI
Sbjct: 301 SDVTDIFQCSEFTTLKDSINCGAVVRAIPAPMSANR-PRSFFDKMIEYAKHLGASGLAYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  D        G +AK  +      I+  +  QDGD+ FFI          AA  R  
Sbjct: 360 QFTND-----GVKGSIAKFFDEALLARIKKLVKCQDGDAIFFICDKEDDATKVAAKIRAK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----NDLL 475
           + +EL II  +C++FCW++DFPFY+ + E  KI F+HNPF+MPQGG+E+        DLL
Sbjct: 415 VGEELNIIKTDCYKFCWVIDFPFYQLDSEVNKITFSHNPFSMPQGGIEAFNKAKTVEDLL 474

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           SIKAFQYD+VCNG E++SG IRNH  ++M +AF+  G SK+ V+ +FG + RAF  G PP
Sbjct: 475 SIKAFQYDIVCNGVELSSGAIRNHKPDLMYKAFAIAGYSKDEVDKQFGAMIRAFSYGAPP 534

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDRI+MLL  + N+REV  FPM+Q   DLLMG+PS V+ +QL+EL L+++   
Sbjct: 535 HGGIAPGIDRILMLLTNSVNIREVIAFPMNQQAEDLLMGAPSAVTEKQLQELQLKLISKE 594

Query: 596 K 596
           +
Sbjct: 595 R 595


>gi|167750485|ref|ZP_02422612.1| hypothetical protein EUBSIR_01461 [Eubacterium siraeum DSM 15702]
 gi|167656636|gb|EDS00766.1| hypothetical protein EUBSIR_01461 [Eubacterium siraeum DSM 15702]
          Length = 592

 Score =  595 bits (1533), Expect = e-167,   Method: Composition-based stats.
 Identities = 227/595 (38%), Positives = 343/595 (57%), Gaps = 13/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RTH CG++    +GS V ++G+V RVR  G ++F+D+RD  GI Q+V +   + A FE 
Sbjct: 9   KRTHYCGEV--EGIGSTVTVAGFVQRVRDKGSLMFVDLRDRTGIVQLVFDDTTEPAVFEK 66

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK ++SE+VL   GL+  R  E+ N +I TG +E+    + ILS+A+  P  +  + +  
Sbjct: 67  AKQIKSEYVLMAQGLLRER--ESKNNDIKTGNVEILVTDLRILSMAQTTPFEIVNDTKTN 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L  N++ R RI  + R       F+E  TP++  S+PEGARD+L
Sbjct: 125 EELRLKYRYLDLRRKKLQDNLIMRHRIAKTAREYFYDNGFLEIETPMMMKSTPEGARDYL 184

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ YKQLLM SGFDRY Q+A CFRDED R+DR P EF Q+D+EM
Sbjct: 185 VPSRVHEGKFYALPQSPQIYKQLLMISGFDRYIQLARCFRDEDLRADRQP-EFTQIDLEM 243

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++ D+IL   E  ++ + ++  + +  +    R+ Y+DA+ RYG+DKPD R  + + +
Sbjct: 244 SFMDVDEILELTEGFIKKLMKDVLDVDI-TTPLPRLTYNDAMSRYGSDKPDTRFGMEIQD 302

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    +EF VFS  ++              G   R   D++ E+++  G  GLAYI W
Sbjct: 303 LSDIVKDTEFSVFSSAIAAGGSVRAIVAKNAAGVLTRKEIDKLTEFSKGIGAKGLAYIRW 362

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D           AK L     +AI   L  + GD    +A             R  + 
Sbjct: 363 HDDA-----PNCSFAKFLKEGELDAILSHLGCEKGDVVLIVADKNKVTLPVLGALRLKVG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +++GI+  + + F WI +FPF+EW++E +     H+PFTMP          D   ++A  
Sbjct: 418 KQIGIVPDSGYNFLWITEFPFFEWDDESESWLAMHHPFTMPMEECLEYLDTDKGKVRAKA 477

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR    E+  + F  +G++ + +E +FG L  A++   PPHGG+  
Sbjct: 478 YDLVLNGIELCSGSIRITDPELQERMFRLLGLTDKEIEEKFGFLVDAYKYAAPPHGGLGI 537

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+ MLL GA ++R+V  FP  ++  +L+   PS V  +QL EL +R V + +
Sbjct: 538 GLDRLSMLLCGADSLRDVVAFPKVKDASELMSQCPSAVDDKQLEELHIRTVVSEE 592


>gi|239930096|ref|ZP_04687049.1| aspartyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291438434|ref|ZP_06577824.1| aspartyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291341329|gb|EFE68285.1| aspartyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 587

 Score =  595 bits (1533), Expect = e-167,   Method: Composition-based stats.
 Identities = 292/597 (48%), Positives = 401/597 (67%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTEAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E V+ +DG V+SR  E +N  + TG++E+    +E+L  A  LP  +  E   
Sbjct: 61  ALDKLSKETVVRVDGKVVSRGEENVNPELPTGEVEVEVGVVEVLGEAAPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT++I+++R +M A  F E +TPIL+A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTQVISAIRQKMTALGFNEMATPILSATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF NG  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFREAMLKYGSDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F  SEF+ F+        +          G  R F D++ ++A +QG  GLA++ 
Sbjct: 301 DITDLFEGSEFKAFA------GKHVRALPVPDVSGQPRKFFDQLGDFAVTQGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G++   GP+AK L   N   +  RL +  G + FF AG+  +        R   
Sbjct: 354 -RVGEDGSLT--GPIAKFLTEENVAELTKRLSLAPGHAVFFGAGEFDEVSKIMGAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G    N F FCWI+DFP YE +EE   IDF+HNPF+MPQGG+E+L+  D L I  +
Sbjct: 411 AKRAGQFEENVFRFCWIVDFPMYEKDEETGAIDFSHNPFSMPQGGLEALETQDPLDILGW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  E+ML+AF   G  +E VE +F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGVELSSGAIRNHEPEIMLKAFEIAGYDRETVEEKFAGMLRAFRFGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +L+EL L + +   K
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELEESRLKELHLSVRKPQPK 587


>gi|212696219|ref|ZP_03304347.1| hypothetical protein ANHYDRO_00755 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676848|gb|EEB36455.1| hypothetical protein ANHYDRO_00755 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 585

 Score =  595 bits (1533), Expect = e-167,   Method: Composition-based stats.
 Identities = 215/594 (36%), Positives = 334/594 (56%), Gaps = 10/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACF 59
           M   R+H CG+L   ++G  V L GWV + R  G ++F+D+RD  GITQ V    DS  +
Sbjct: 1   MEFKRSHMCGELREENIGEEVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVTREEDSENY 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  K V  E+VL + G V  R  E+ N  I TG IE+ A+KI IL  A+  P+ +  + +
Sbjct: 61  KTVKDVAGEYVLEVKGEVRER--ESKNPEIPTGNIEIVAEKINILDKAKTPPIYIKDDDD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+++ KYR+LD+R+ ++ KN+  R+ I+  MR  M    F E  TP LT  +PEGARD
Sbjct: 119 VSENLKLKYRYLDMRKQSVQKNLKLRSDIVRCMREYMYDNKFTEVETPFLTKPTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVNQG FYALPQ+PQ  KQLLM    DRYFQI  CFRDED R++R P EF QLD+
Sbjct: 179 YLVPSRVNQGRFYALPQSPQLMKQLLMIGSLDRYFQIVKCFRDEDLRANRQP-EFTQLDI 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E+SF +QDD++   E +L+ +F+ F++ + +     R+ Y +A+  YG+DKPDLR    +
Sbjct: 238 ELSFADQDDVIKVNEGLLKKLFDTFTDYD-LQLPIPRMDYSEAMNSYGSDKPDLRYGYKI 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++E F  S+F+VF+  +             +    +R   D++ ++ +  G  GL++I
Sbjct: 297 NDISEIFKGSDFKVFTDNIKEGHSVRAINFTGQASNYSRKQLDKLTDFVKDYGLKGLSFI 356

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  D   N      + K L       ++ +LD++D D     A             R  
Sbjct: 357 KFNSDNDIN----SSIKKFLTDDIINNLKEKLDIKDNDLILIAADKNKTVLEGLGALRRK 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A++  +     + FCW+++FP +E++EEE +    H+PFTMP      L   +   ++ 
Sbjct: 413 VAKDQNLYEKE-YAFCWVVNFPMFEYSEEEDRYVSQHHPFTMPNEEDVDLLLTEPEKVRT 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G +R +  E+  + F  + +S E ++ +FG    A Q G PPH G+
Sbjct: 472 QAYDIVINGDEMGGGSVRINNQELQEKVFKALKLSDEDIKQKFGFFIEALQYGTPPHAGL 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DR+VML     N++++  FP +Q+    L  +PS V  + L EL + + E
Sbjct: 532 AYGLDRMVMLFAKTDNIKDIIAFPKTQSATCPLTQAPSIVDEKSLSELSIEVKE 585


>gi|251771879|gb|EES52453.1| aspartyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 585

 Score =  595 bits (1533), Expect = e-167,   Method: Composition-based stats.
 Identities = 232/591 (39%), Positives = 338/591 (57%), Gaps = 9/591 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFE 60
            YR+H   DL  S  G+ V ++GWV  VR HGG++F+++RD  G  Q V +        E
Sbjct: 1   MYRSHPVSDLFTSPPGTPVTIAGWVQTVRDHGGLLFIELRDRSGRIQCVVDAKDNRLLEE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AK++R EWV+ + G V  R   T+N ++  G  E+   ++ IL+ A+  P PV    E 
Sbjct: 61  AAKTLRDEWVISLHGTVGMRPEGTVNVSVAGGDREVRVTQLTILNSAKTPPFPVGTSEEV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            ES+R  YR+LD+R   L + +  R+ +   +R  M +  F E  TP+LT S+PEGARDF
Sbjct: 121 SESLRLTYRYLDMRSPRLLEALRFRSELTALIRNHMTSHQFWEIETPLLTRSTPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+ +GSFYALPQ+PQ +KQLLM  G +RYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 181 LVPSRLEKGSFYALPQSPQLFKQLLMVGGLERYFQIARCFRDEDLRADRQP-EFTQVDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ +D  L  +E +   +F++F    T+S  F+R+ YD+A+ RYG+DKPDLR  + + 
Sbjct: 240 ASFLTRDKFLGIIEELFCDIFKKFRG-ETLSRPFMRLTYDEAMNRYGSDKPDLRYDLPIV 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+   +++F VF+  ++   G         G   +R   + +  WA  QG  GLA+I 
Sbjct: 299 DLTDLARNTQFSVFTNAVAAEEGTVRGIRYPGGAALSRKEIEDLTAWAMGQGAKGLAWIK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                S       P+ K +     + +R R++ Q GD   FIA             R H+
Sbjct: 359 -----SEAEGLASPILKFIPEEVQKGVRERMEAQPGDLLLFIADTKKTALRILGALRQHV 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G+I+ +     W++DFP  EWN +EK+ +  H+PFT P      +        ++ 
Sbjct: 414 AERAGLIDRSKTSLFWVVDFPLLEWNPDEKRYEAIHHPFTAPHPDDLGILSEAPEKTRSL 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IRNH  E+  + F  +G+S+E    RFG L  A   G PPHGG+A
Sbjct: 474 AYDLVLNGTEVGGGSIRNHELELQRRIFDLIGLSEEEATRRFGFLLEALSFGAPPHGGMA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+ M+LLG  ++REV  FP +Q    LL  +P+ V   QLRELG+R+
Sbjct: 534 IGLDRLAMILLGRDSIREVMAFPKTQKGSCLLTEAPAPVDGVQLRELGIRL 584


>gi|297193199|ref|ZP_06910597.1| aspartyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197720469|gb|EDY64377.1| aspartyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 590

 Score =  595 bits (1533), Expect = e-167,   Method: Composition-based stats.
 Identities = 298/597 (49%), Positives = 404/597 (67%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +   E
Sbjct: 1   MHRYRSHTCGELRASDVGADVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTKAAE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +   +  E V+ +DG V+SR AE +N ++ TG+IE+ A ++EIL  A++LP  V  +   
Sbjct: 61  VLDKLTKETVVRVDGKVVSRGAENVNPDLPTGEIEVEAAEVEILGAAKQLPFTVNTDDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+++R +M A  F E +TPIL A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILAATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF  G  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++ F  SEF+ F+            A+P       R F D + ++A  QG  GLA++ 
Sbjct: 301 DISDVFAGSEFKAFA-----GKHVRALAVPDT-ADQPRKFFDGLGDYAVEQGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+   G +   GP+AK L   N + +  RL +  G + FF AGD  +        R   
Sbjct: 354 -RVGNDGALT--GPIAKFLTEENVKVLTERLGLAAGHAVFFGAGDFDEVSKIMGAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G    N F FCWI+DFP YE +EE  KIDF+HNPF+MPQGG+E+L+  D L I  +
Sbjct: 411 AKRAGHFEENVFRFCWIVDFPMYERDEETGKIDFSHNPFSMPQGGLEALETKDPLDILGW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  E+M +AF   G S+E VE+ F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGVELSSGAIRNHEPEIMFKAFEIAGYSRETVEHEFAGMLRAFEYGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRIVMLL    N+RE   FP++ N  DLLMG+P+ +   +LREL +++ +   K
Sbjct: 531 PGIDRIVMLLADEPNIRETIAFPLNGNAQDLLMGAPTELDEARLRELNIQLRKPVAK 587


>gi|188994130|ref|YP_001928382.1| aspartyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|238691459|sp|B2RHE0|SYD_PORG3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|188593810|dbj|BAG32785.1| aspartyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 587

 Score =  595 bits (1533), Expect = e-167,   Method: Composition-based stats.
 Identities = 230/600 (38%), Positives = 342/600 (57%), Gaps = 19/600 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
            YRT++CG+L +S +   V L GWV RVR  GG+ F+D+RD YG TQ+V N DSA  E+ 
Sbjct: 1   MYRTNTCGELRLSHLQQTVTLCGWVQRVRRMGGMTFVDLRDRYGTTQLVFNRDSAPAELC 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +  EWV+   G VM RS++  N NI TG IE++  ++++L+ +E  P  +  E +
Sbjct: 61  DRAEDLGREWVIRATGTVMERSSK--NPNIPTGDIEIAVGEMDVLNRSEVPPFTIEDETD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + +R KYR+LDLRR  +  N+  R R+   +R  +  E F+E  TP+L  S+PEGARD
Sbjct: 119 GGDDLRMKYRYLDLRRHCVRSNMELRHRMALEVRKYLDGEGFLEVETPMLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNPGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVEQ+D+L+T E + + +F    +       F R+ + DA++ YG+DKPD R  +  
Sbjct: 238 EMSFVEQEDVLSTFEGMAKHLFRTIRHVEISEA-FPRMTWHDAMKYYGSDKPDTRFDMRF 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             + +     +F VF     +             G   R   D + ++ +    G  G+ 
Sbjct: 297 VELMDVLKGHDFSVFDSAAYIGG-----ICAKGAGSYTRKQLDALTDFVKRPQVGAKGMV 351

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           Y   R++  G+V     V K       + +R  ++ + GD    ++GD L K      + 
Sbjct: 352 YA--RVESDGSVK--SSVDKFYTQETLQELRRTMEAEPGDLILILSGDDLMKTRKQLCEL 407

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +  +LG+ + N F   W++DFP +EW+EE K+    H+PFT P+     L   D  +
Sbjct: 408 RLEVGSQLGLRDKNKFSCLWVVDFPLFEWDEETKRFYAMHHPFTSPKPEDIPLLDTDPGA 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD+V NG E+  G IR H S +  + F  +G + E  + +FG L  AF+ G PPH
Sbjct: 468 VRANAYDMVINGVEVGGGSIRIHDSALQQKMFELLGFTPEKAQEQFGFLMNAFKYGAPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR V L  G  ++R+   FP +    D+++ +PS +   QL+EL L ++ N  
Sbjct: 528 GGLAYGLDRWVSLFAGLDSIRDCIAFPKNNAGRDVMIDAPSVIDEAQLQELFLELIPNEN 587


>gi|294782756|ref|ZP_06748082.1| aspartate--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294481397|gb|EFG29172.1| aspartate--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 592

 Score =  594 bits (1532), Expect = e-167,   Method: Composition-based stats.
 Identities = 226/594 (38%), Positives = 341/594 (57%), Gaps = 16/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+  +L V ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLAELRVKNIGETVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NPNIPTGDIEVFAKEIEILNACDTLPFQISGIDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TPILT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMINNLKMRHRMIMSIRNYMDQAGFLDVDTPILTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  +     +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVTGEE-ANYTFQRMPYAEAMDRFGSDKPDLRFAVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P+     +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAIVAPSANEKFSRKIISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI       G      P+AK L     +AI  + + + GD  F +A       +     R
Sbjct: 359 YIKL-----GADGISSPIAKFLTEDEMKAIIEKTEAKTGDLIFIVADKKKVVAAALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLS 476
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT  +              
Sbjct: 414 LRIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFTSIKAEDLDKFLAGQTED 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I+   YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF+ G PPH
Sbjct: 474 IRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFGFFIDAFKYGAPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           GG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL ++
Sbjct: 534 GGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDDKQLEELFIK 587


>gi|149194524|ref|ZP_01871620.1| aspartyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135268|gb|EDM23748.1| aspartyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 588

 Score =  594 bits (1532), Expect = e-167,   Method: Composition-based stats.
 Identities = 234/596 (39%), Positives = 346/596 (58%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           R+H C +L   +VG  V L GWV+  R HGG+IF+D+RD  G+ Q+VA+P       E+A
Sbjct: 2   RSHYCAELNEFNVGEEVELVGWVNSHRDHGGVIFIDLRDRSGLIQIVADPADSKKAHEVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + V+ E+V+ + G V  R     N  + TG+IE+ A +IEI + +E +     G++   E
Sbjct: 62  ERVKDEYVIKVKGKVRLRGEGLENPKLKTGKIEVVADEIEIENKSE-VLPFQIGDKSVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR     +  + R++++ ++R     E FI+  TPILT S+PEGARD+LV
Sbjct: 121 ELRLKYRYLDLRDKNSLETFILRSKVVKAIRDYFDKEGFIDVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQ+LM +GFD+Y+QIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRIYPGEFYALPQSPQLFKQILMVAGFDKYYQIAKCFRDEDLRADRQP-EFTQVDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV QDD++ T+E +++  F E +    V     RI Y +A+ +YG+DKPDLR  + M +V
Sbjct: 240 FVTQDDVIKTIEGMIKEAF-EVAGIK-VDLPIKRISYKEAMEKYGSDKPDLRFDLAMVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + FV S   +FS+I          A+  +GG    +R     +  + +  G  GLAYI 
Sbjct: 298 IDEFVDSNNEIFSEIAKDKKNNRFKALKIEGGDNFYSRKKLKELENFVKKFGAKGLAYIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +          GP+ K ++  +   +  +L+ + GD  FF AGD      +    R  I
Sbjct: 358 VK-----EERLKGPILKFMSEESLNRLIEKLNPKVGDIIFFGAGDKKTVLDYMGRLRIKI 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++G+IN + + F W++DFP +E +E        H+PFTM    M +    +   I + 
Sbjct: 413 AKDMGLINEDEYNFVWVVDFPMFEKDENNNP-TPLHHPFTM--PDMGTWDEENFEDINSI 469

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+EI  G IR H  E+  + F  +GI +     +FG L  A + G PPHGG A
Sbjct: 470 AYDLVLNGYEIGGGSIRIHKEEIQEKVFKLLGIDEMEAREKFGFLLDALKFGAPPHGGFA 529

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+    N+R+V  FP +Q    LL G+P  V   QL+EL +RI + PK
Sbjct: 530 LGLDRVIMLMRKTDNIRDVIAFPKTQKAQCLLTGAPGEVDKSQLKELHIRI-KKPK 584


>gi|21911350|ref|NP_665618.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28896724|ref|NP_803074.1| aspartyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|25009289|sp|Q8K5J0|SYD_STRP3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|21905565|gb|AAM80421.1| putative aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28811978|dbj|BAC64907.1| putative aspartyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 582

 Score =  594 bits (1532), Expect = e-167,   Method: Composition-based stats.
 Identities = 225/595 (37%), Positives = 345/595 (57%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++ 
Sbjct: 1   MKRSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +RSE+V+ ++G V +R     N  + TG +EL    + IL+ A+  P  +  + E
Sbjct: 61  ATAERLRSEYVIEVEGFVEARQ--QANDKLATGMVELKVSALTILNTAKTTPFEIKDDVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V +E    + V+    R+ YD A+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDIVEGMIAKVMKETKEID-VTLPLPRMSYDVAMNSYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T      +F+VFS+     P  +   +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTVTVKGIDFKVFSEA----PAVKAIVVKGNADRYSRKDIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G +A  GPVAK L  + TE +  +L + + D   F+A       +     RN 
Sbjct: 353 KVT---DGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVADTLEVANNTLGALRNR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I  +
Sbjct: 527 AIGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQIESH 581


>gi|34540016|ref|NP_904495.1| aspartyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|46577172|sp|Q7MXM0|SYD_PORGI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|34396327|gb|AAQ65394.1| aspartyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 587

 Score =  594 bits (1532), Expect = e-167,   Method: Composition-based stats.
 Identities = 230/600 (38%), Positives = 341/600 (56%), Gaps = 19/600 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
            YRT++CG+L +S +   V L GWV RVR  GG+ F+D+RD YG TQ+V N DSA  E+ 
Sbjct: 1   MYRTNTCGELRLSHLQQTVTLCGWVQRVRRMGGMTFVDLRDRYGTTQLVFNRDSAPAELC 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +  EWV+   G VM RS++  N NI TG IE++  ++++L+ +E  P  +  E +
Sbjct: 61  DRAEDLGREWVIRATGTVMERSSK--NPNIPTGDIEIAVGEMDVLNRSEVPPFTIEDETD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + +R KYR+LDLRR  +  N+  R R+   +R  +  E F+E  TP+L  S+PEGARD
Sbjct: 119 GGDDLRMKYRYLDLRRHCVRSNMELRHRMALEVRKYLDGEGFLEVETPMLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNPGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVEQ+D+L+T E + + +F    +       F R+ + DA++ YG+DKPD R  +  
Sbjct: 238 EMSFVEQEDVLSTFEGMAKHLFRTIRHVEISEA-FPRMTWHDAMKYYGSDKPDTRFDMRF 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             + +      F VF     +             G   R   D + ++ +    G  G+ 
Sbjct: 297 VELMDVLKGHGFSVFDSAAYIGG-----ICAKGAGSYTRKQLDALTDFVKRPQVGAKGMV 351

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           Y   R++  G+V     V K       + +R  ++ + GD    ++GD L K      + 
Sbjct: 352 YA--RVESDGSVK--SSVDKFYTQETLQELRRTMEAEPGDLILILSGDDLMKTRKQLCEL 407

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +  +LG+ + N F   W++DFP +EW+EE K+    H+PFT P+     L   D  +
Sbjct: 408 RLEVGSQLGLRDKNKFSCLWVVDFPLFEWDEETKRFYAMHHPFTSPKPEDIPLLDTDPGA 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD+V NG E+  G IR H S +  + F  +G + E  + +FG L  AF+ G PPH
Sbjct: 468 VRANAYDMVINGVEVGGGSIRIHDSALQQKMFELLGFTPEKAQEQFGFLMNAFKYGAPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR V L  G  ++R+   FP +    D+++ +PS +   QL+EL L ++ N  
Sbjct: 528 GGLAYGLDRWVSLFAGLDSIRDCIAFPKNNAGRDVMIDAPSVIDEAQLQELFLELIPNEN 587


>gi|303237382|ref|ZP_07323952.1| aspartate--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302482769|gb|EFL45794.1| aspartate--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 586

 Score =  594 bits (1532), Expect = e-167,   Method: Composition-based stats.
 Identities = 217/595 (36%), Positives = 336/595 (56%), Gaps = 19/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YR  +CG+L ++D    V L+GWV R R  GG+ F+D+RD YGITQ+V N   D+   E
Sbjct: 1   MYRNKTCGELRLTDASKEVILAGWVQRTRKMGGMTFVDLRDRYGITQLVFNEAEDAGLCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + I G+V  R ++  N+ I TG+IE+  +++ +LS +   P  +    + 
Sbjct: 61  EANKLGREYCIQIKGIVSERQSK--NSKIPTGEIEIIVKELNVLSSSVTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  +  N+  R R+   +R  +   NFIE  TPIL  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRPAVRSNLELRHRMTILIRNFLDNLNFIEVETPILIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+L   E++ R +F+E            ++ + +A++RYG+DKPD+R  +   
Sbjct: 238 MSFVNQEDVLKVFEDMSRHLFKEIRGVELPEKL-EQMTWQEAMKRYGSDKPDIRFGMEFV 296

Query: 301 NVTEHFVH-SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + +     S+F VF++   +        +       +R   + + ++ +    G  GL 
Sbjct: 297 ELMDDLKGTSDFSVFNEANYIGG-----IVVPGCADYSRKQLNELTDFVKRPQVGAKGLV 351

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADA 416
           YI +      N      + K       + ++     ++GD    ++GD   K        
Sbjct: 352 YIKY----GENGEAKSSIDKFFTQEQLQKVKETTGAKNGDLVLILSGDHVNKTRVQLCAL 407

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L       
Sbjct: 408 RLEMGNRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDLHLLDTHPEQ 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G IR H +E+  + F  +G +++  E +FG L  AF  G PPH
Sbjct: 468 VRALAYDFVCNGIEVGGGSIRIHDTELQEKMFEVLGFTRQQAEEQFGFLMNAFHYGAPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            GIA G+DR V ++ G  ++R+V  FP + +  D+++ +PS ++ +QL EL +++
Sbjct: 528 AGIAFGLDRYVSIMAGLDSIRDVIAFPKNNSGRDVMLDAPSNLADKQLDELQIKL 582


>gi|157414919|ref|YP_001482175.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047092|sp|A8FL61|SYD_CAMJ8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157385883|gb|ABV52198.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747557|gb|ADN90827.1| Aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
          Length = 583

 Score =  594 bits (1532), Expect = e-167,   Method: Composition-based stats.
 Identities = 240/596 (40%), Positives = 344/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+      EIA
Sbjct: 2   RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            + R+E+VL  +G +  R    +N  + TG+IE+   K+ I + +  +P     +    E
Sbjct: 62  SNARNEFVLIAEGTIRPRGEGLVNPKLKTGEIEVVVSKLTIENES-AVPPFAIADESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++N  E  L+ +F+       +   F ++ Y DA+  YG+DKPDLR  +   +V
Sbjct: 240 FCEQKDVINVAETFLKDIFKACGKE--IQTPFRQMQYKDAMENYGSDKPDLRFDLKFIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R  +
Sbjct: 358 VKED-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ N  EF W++DFP +E N++       H+PFTMP+   E     DL  I + 
Sbjct: 413 ANELNLIDPNALEFLWVVDFPMFEQNDD-GSYSAMHHPFTMPKNIDE----TDLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 528 IGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|148926627|ref|ZP_01810308.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145845146|gb|EDK22241.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 615

 Score =  594 bits (1532), Expect = e-167,   Method: Composition-based stats.
 Identities = 240/596 (40%), Positives = 343/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+      EIA
Sbjct: 34  RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 93

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            + R+E+VL  +G +  R    +N  + TG+IE+   K+ I + +  +P     +    E
Sbjct: 94  SNARNEFVLITEGTIRPRGEGLVNPKLKTGEIEVVVSKLTIENES-AVPPFAIADESVNE 152

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 153 ELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 212

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 213 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 271

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++   E  L+ +F+       +   F ++ Y DA+  YG+DKPDLR  +   +V
Sbjct: 272 FCEQKDVIKVAETFLKDIFKACGKE--IQTPFRQMQYKDAMENYGSDKPDLRFDLKFIDV 329

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+I 
Sbjct: 330 IDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 389

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R  +
Sbjct: 390 VKKD-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRIFL 444

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ N  EF W++DFP +E N++       H+PFTMP+   E     DL  I + 
Sbjct: 445 ANELKLIDPNALEFLWVVDFPMFEQNDD-GSYSAMHHPFTMPKNIDE----TDLEEISSI 499

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGGIA
Sbjct: 500 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIA 559

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+ GA N+REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 560 IGLDRLIMLVTGANNIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 615


>gi|187735889|ref|YP_001878001.1| aspartyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187425941|gb|ACD05220.1| aspartyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 597

 Score =  594 bits (1532), Expect = e-167,   Method: Composition-based stats.
 Identities = 232/606 (38%), Positives = 351/606 (57%), Gaps = 18/606 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M+ YRTH+C +L  +++G    L GWV  VR HGG+IF+D+RD  GITQVV +P+     
Sbjct: 1   MNSYRTHTCSELRAANIGKPTTLIGWVDSVRDHGGVIFIDLRDRSGITQVVFHPEVNQDV 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSR----SAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            + ++ +RSE ++ I G V +R    + +T NA++ TG+IE+SA  + +++ A+ +    
Sbjct: 61  AKASQQLRSEDMIQISGTVAARLKTDTVDTTNADLPTGEIEVSADTLNVINKAD-VLPFQ 119

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                  E +R KYRFLDLRR T+ +N+  R R+  S R  +    F+E  TPIL+ S+P
Sbjct: 120 LDRALSNEDLRLKYRFLDLRRPTMARNMQIRHRVTKSTRDYLDEHGFLEIETPILSKSTP 179

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EGARDFLVPSR+  G FYALPQAPQQYKQLLM +G +RYFQIA CFRDED R+DR P EF
Sbjct: 180 EGARDFLVPSRLAPGKFYALPQAPQQYKQLLMVAGMERYFQIARCFRDEDLRADRQP-EF 238

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            Q+D+E SF+  +DI N +E +L+ V++E    +     F R+ + +A+ +YG+DKP+ R
Sbjct: 239 TQVDIEASFITPEDIYNLVEGLLKRVYKESLGVDI-PTPFPRMTWKEAMDQYGSDKPERR 297

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354
             + + +V+  F +S F+VF+  +S     +       G   +    D + + A   G  
Sbjct: 298 FGMKLTDVSSIFENSGFKVFASAVSNGGVVKAINAKGFGSA-SVGQIDALTKTAVEAGAK 356

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GLAYI  R ++        P++K L+    + +   LD++ GD   F AG     C    
Sbjct: 357 GLAYIKVREED-----WRSPISKFLSDEEKQKLTEALDIETGDLVLFAAGPWEPSCDILG 411

Query: 415 DARNHIAQELGIINCNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
             R   A+ + ++  N    F W+++FP   W+EEE++    H+PFT P    E    + 
Sbjct: 412 RVRLQCAEFMELLKDNKERDFLWVIEFPLVGWDEEEQRWVAIHHPFTRPVKEDEQKLLSG 471

Query: 474 LLSI--KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            LS   +A  YD+V NG E+  G IR H  ++    F  +GI++E    +FG +  AF  
Sbjct: 472 ELSADLRAQAYDVVLNGTELGGGSIRIHERDLQSAMFKALGITEEQAREQFGHILDAFSF 531

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G+DR+VM++  A+++REV  FP +    DL+  SP+     QLR++ +++
Sbjct: 532 GAPPHGGLALGLDRLVMMICNAESIREVIAFPKNNRGADLMSDSPAAAEDRQLRDIHIQV 591

Query: 592 VENPKK 597
               KK
Sbjct: 592 KLPAKK 597


>gi|291300018|ref|YP_003511296.1| aspartyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290569238|gb|ADD42203.1| aspartyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 1019

 Score =  594 bits (1532), Expect = e-167,   Method: Composition-based stats.
 Identities = 228/596 (38%), Positives = 342/596 (57%), Gaps = 10/596 (1%)

Query: 4    YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
            YRT++ G++  +D+   V L+GWV R R HGG+ F+D+RD  G+ QVV   D    E+AK
Sbjct: 432  YRTYNAGEIRATDIEYPVCLAGWVARRRDHGGVEFIDLRDASGVVQVVF-RDGEAAELAK 490

Query: 64   SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             +R E+ + ++G+V  R     N ++ TG+IE+ A K+ ILS A  LPLP+    E  E 
Sbjct: 491  ELRDEFCVQVNGVVARRPEGNENPDLPTGEIEIVADKLTILSRAAALPLPIDDHLEVGED 550

Query: 124  IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            +R K+R+LDLRR      +  R+      R  +  E F+E  TP LT S+PEGARDFLVP
Sbjct: 551  VRLKHRYLDLRRTGPATALRLRSEANRIARNLLHDEGFVEIETPTLTRSTPEGARDFLVP 610

Query: 184  SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
             R+  G++YALPQ+PQ +KQLLM SGF+RY+QIA C+RDED R+DR P EF QLD+E SF
Sbjct: 611  VRLQPGTWYALPQSPQLFKQLLMVSGFERYYQIARCYRDEDFRADRQP-EFTQLDIEASF 669

Query: 244  VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            V +DD++   E ++  ++++ +    +      I + DA+RRYG+DKPDLR  + + +++
Sbjct: 670  VTEDDVIKLGEKIVAALWKDLAGYE-LPGPIPLITWHDAMRRYGSDKPDLRFGVELVDLS 728

Query: 304  EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
             +   +EFRVFS  L+         +   G    R   D   +WA+++G  GLAY+ +  
Sbjct: 729  TYLKGTEFRVFSGALAAGGHV-GAVVMPGGASQTRKELDGWQDWAKARGARGLAYVLF-- 785

Query: 364  DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-IAGDPLKFCSFAADARNHIAQ 422
             ++      GPVAK+L+  +   +   +  + GD+ FF  + D +        AR  I +
Sbjct: 786  -DAETGEPRGPVAKNLSEEHLSGLATAVGAKPGDAVFFAASTDTIDAQELLGAARLEIGR 844

Query: 423  ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              G+I+ + + FCW++D P +   +E       H+PFT P         ++     A+ Y
Sbjct: 845  RCGLIDTDEWAFCWVVDAPMFGKTDE--GWTSLHHPFTSPNSDWARSFQDNPGEALAYAY 902

Query: 483  DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
            D+VCNG EI  G IR H  +   + F  +GI +    ++FG L  AF+ G PPHGGIA G
Sbjct: 903  DIVCNGNEIGGGSIRIHDGDTQRKVFDVLGIDEAEAADKFGFLLEAFKYGPPPHGGIAFG 962

Query: 543  IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
             DRI  LL  A ++REV  FP S+   D L G+P+T++ +Q +E G+      K+ 
Sbjct: 963  WDRICALLSKADSIREVIAFPKSRGGHDPLTGAPTTITAQQRKEAGVDAKPVVKEA 1018


>gi|84496698|ref|ZP_00995552.1| aspartyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84383466|gb|EAP99347.1| aspartyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 620

 Score =  594 bits (1532), Expect = e-167,   Method: Composition-based stats.
 Identities = 231/617 (37%), Positives = 336/617 (54%), Gaps = 30/617 (4%)

Query: 5   RTHSCGDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH  G L    +   G  V L+GWV + R HGG+ F+D+RD  G+ QVVA  D      
Sbjct: 3   RTHEAGTLTADHISQAGQTVTLTGWVAKRRDHGGVAFIDLRDASGVVQVVA-RDEVLTGA 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +R+E+ + + G V++R+   +NA + TG IE+ A  IE+L+ +  LP  +       
Sbjct: 62  AHDLRAEFCIKVTGEVVARTEANVNAELPTGAIEVVASAIEVLAPSAPLPFQIDERTTVG 121

Query: 122 ESIRFKYRFLDLRRD---TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  R K+R+LDLRR    +    +  R+++  + R  +   +F+E  TP LT S+PEGAR
Sbjct: 122 EEARLKHRYLDLRRPGKSSAGTALRLRSKVNAAARRVLEGRDFVEIETPTLTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD
Sbjct: 182 DFLVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVEQDD++  ME+VL  +++       +     R+ Y +A+RR+G+DKPDLR  + 
Sbjct: 241 IEMSFVEQDDVIELMEDVLAEMWKLI--DVEIPRPIPRMTYAEAMRRFGSDKPDLRMGLE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +   T++F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAY
Sbjct: 299 LVECTDYFSETTFRVFQAP------YVGAVVMPGGASQPRKKLDAWQDWAKQRGAKGLAY 352

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +   + E G +   GPVAK+L       +   +  + GD  FF AGD     +    AR 
Sbjct: 353 VL--VTEDGTLG--GPVAKNLTETEVAGLAEHVGAKAGDCIFFAAGDAKSSRALLGAARL 408

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMES 468
            I Q   +I+ + F F W++D P +E + +                 H+ FT P+     
Sbjct: 409 EIGQRGDLIDKDAFAFTWVVDAPMFEPSSDAVASGDVAVGAGAWTAVHHAFTGPKPEFAD 468

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
               D  S  A+ YD+VCNG E+  G IR H  +V  + F  +G++ E  + +FG L  A
Sbjct: 469 TFDTDPGSALAYAYDIVCNGNELGGGSIRIHRRDVQERVFKVMGLTDEESQEKFGFLLDA 528

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           F  G PPHGGIA G+DRI  LL G  ++R+V  FP S    D L  +P+ ++ EQ +E G
Sbjct: 529 FAFGAPPHGGIAVGMDRICALLAGTDSIRDVIAFPKSGGGYDPLTAAPAPITPEQRKEAG 588

Query: 589 LRIVENPKKILKISVTT 605
           +     PK   K    +
Sbjct: 589 VDAKPEPKGEAKGEAKS 605


>gi|319937182|ref|ZP_08011589.1| aspartyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807548|gb|EFW04141.1| aspartyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 588

 Score =  594 bits (1532), Expect = e-167,   Method: Composition-based stats.
 Identities = 212/597 (35%), Positives = 337/597 (56%), Gaps = 12/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G L +S VG  V L GWV + R  G ++F+D+RD YG+TQ++   D +  E  K 
Sbjct: 3   RTHNNGQLRMSHVGDNVELIGWVAKKRNLGALVFIDLRDRYGVTQIIF--DESFEERLKE 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           V++E++L + G V+ RS++  N  + TG IE+ A+  +I++ A+  P+ V  E +  E  
Sbjct: 61  VKNEYILQVKGSVIERSSK--NPKMATGDIEVQAKDFQIINTAKLTPMIVADETDALEET 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR  + +N++ R +I  S+R  +   +FI+  TP L  S+PEGARDFLVPS
Sbjct: 119 RMQYRYLDLRRPMMQENLMTRHKITRSIREYLDNLDFIDIETPYLNRSTPEGARDFLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G FYALPQ+PQ +KQLLM SGF++Y+QIA CFRDED R+DR   EF Q+D+EMSF+
Sbjct: 179 RVHKGEFYALPQSPQLFKQLLMVSGFEKYYQIARCFRDEDLRADRQI-EFTQVDVEMSFL 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             D IL   E ++  V  +    +       R+ + +A+ +YG DKPD R  + + N+  
Sbjct: 238 STDRILEIGEGMIAKVMHDVKGIDI-ELPLRRLTWHEAMEKYGIDKPDTRFGLELVNLNH 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                +F VF   L  +   +   + A+    +R   D + E A++    GLA++     
Sbjct: 297 IVADVDFAVFKNALEAHGHVKGINVVAQAQEFSRKKIDNLTEIAKTYKAKGLAWLKV--- 353

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHIAQE 423
                   GP+AK         +   ++ ++ D   F+        C   A  RN++ +E
Sbjct: 354 --SEAGVQGPIAKFFTEEQMNTLLTAMNAKENDLLLFVGDPKYEVVCDSLAAIRNYLGKE 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L + + + F+F W++DFP +E+++E ++    H+PFT P+         D  +  A  YD
Sbjct: 412 LKLYDPSTFDFLWVVDFPMFEYDDETQRYYAKHHPFTRPKDEDIDKLETDPENCLADAYD 471

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NGFE+  G  R +   +  +AF  +G ++E ++++FG      Q G PPHGG A G+
Sbjct: 472 IVLNGFELGGGSQRIYEQNLQERAFKALGFTQEQIDSQFGWFVEGLQYGTPPHGGFALGL 531

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           DR+ MLL G  ++R+V  FP + +    +  +P+ V+  QL ELG+ + +N     K
Sbjct: 532 DRVAMLLCGCDSLRDVIAFPKNTSATCPMSKAPTPVAKAQLDELGIGVNKNESTESK 588


>gi|291276850|ref|YP_003516622.1| aspartyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964044|emb|CBG39884.1| aspartyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 580

 Score =  594 bits (1532), Expect = e-167,   Method: Composition-based stats.
 Identities = 231/590 (39%), Positives = 337/590 (57%), Gaps = 17/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH C +L  +++G  VRL+GW +  R HGG++F+D+RD  G+ Q+V +P S  + +A S
Sbjct: 3   RTHLCANLDETNIGEEVRLAGWCNTYRDHGGVVFIDLRDKSGLIQLVCDPSSKAYSLASS 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R E+VL I G V +R     N  + TG IE+    + I + ++  P+   G+    E +
Sbjct: 63  IRDEYVLLISGKVRARGEGLQNPKLKTGNIEVVVDSLIIENPSKTPPI-SIGDEGVSEEL 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           + KYR+LDLR     +    R+ +   +R  + A +FIE  TPILT ++PEGARD++VPS
Sbjct: 122 KLKYRYLDLRSAKSFEIFKMRSEVCKLIRDTLHALDFIEVETPILTKATPEGARDYVVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ G F+ALPQ+PQ +KQLLM SG DRYFQIA CFRDED R+DR P EF Q+D+EMSF 
Sbjct: 182 RVHDGEFFALPQSPQIFKQLLMVSGLDRYFQIAKCFRDEDLRADRQP-EFSQIDVEMSFC 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            Q+D++   E +++ +F   S    V   F R+ Y +A+ +YG+DKPDLR  + +  +++
Sbjct: 241 TQEDVMEVAEILIKNIFR--SKNIEVQTPFRRMDYQEAMEKYGSDKPDLRFEMPLFEISD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
               S   +F  I          A+  K G     R       E+ R  G  GLAY+  +
Sbjct: 299 LMQDSSNAIFQSIAKDVKKNRFKALVVKNGDHFFTRKTLGEAEEFVRKFGAQGLAYLQIK 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                     GP+ K ++  N   I  R+    GD  FF AG+      +    R  IAQ
Sbjct: 359 -----EEGPKGPLVKFISQENLGKILERVGASSGDIIFFGAGEKSLVWDYMGRLRLKIAQ 413

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ++G+I  + +EF W++DFP +E  E   K    H+PFTMP+     +   D+ +IK+  Y
Sbjct: 414 DMGLIQSDRYEFLWVVDFPMFEKTE--GKFSALHHPFTMPK----DIDNPDIETIKSIAY 467

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  +GISKE  E +FG L  A   G PPHGG A G
Sbjct: 468 DIVLNGVELGGGSIRIHKEEIQQKVFEILGISKEEAEEKFGFLLEALSFGAPPHGGFAIG 527

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR+VMLL  + ++R+V  FP +Q     L  +PS +S +QLREL +R+ 
Sbjct: 528 LDRLVMLLTHSPSIRDVIAFPKTQKATCPLTDAPSAISEQQLRELHIRLR 577


>gi|15645242|ref|NP_207412.1| aspartyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|3024680|sp|P56459|SYD_HELPY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2313739|gb|AAD07682.1| aspartyl-tRNA synthetase (aspS) [Helicobacter pylori 26695]
          Length = 577

 Score =  594 bits (1532), Expect = e-167,   Method: Composition-based stats.
 Identities = 226/591 (38%), Positives = 344/591 (58%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  V+++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKIVKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G V  R A   N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKVRLRGAGLENPKLKTGKIEIVLEELIIENKSATPPIE-IGNKHVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+     +T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQEIFKAVG--HTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F  S   +FS          + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFRDSSNAIFSNTAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            DE       GP+ K L+    + I  R D Q GD  FF AGD      +    R  +A+
Sbjct: 358 EDE-----IKGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+     ++  D+  ++A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKN----IECEDIEEVEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSHSIRDVIAFPKTQKASCLLTNAPSPINEEQLRELHIRLRK 577


>gi|313680016|ref|YP_004057755.1| aspartyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152731|gb|ADR36582.1| aspartyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 584

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 238/599 (39%), Positives = 334/599 (55%), Gaps = 23/599 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RTH CG+L     G  V L GWV+R R  GG++FLD+RD  G+ QVV +P+S  F  A
Sbjct: 1   MKRTHYCGELNERHEGERVLLQGWVNRRRDLGGLVFLDLRDRTGLVQVVVDPESPAFAEA 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP----VFGER 118
           + VR E+VL I+G V +R A+ +N  + TG++E++A ++E+L+ A   P P      GE 
Sbjct: 61  ERVRGEYVLEIEGTVRARPADQVNPELATGRVEVAAARLEVLNEAATPPFPVDASWRGED 120

Query: 119 E----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
           +      E +R KYR+LDLRR  +   +  R  +I ++   + AE F++  TP LT S+P
Sbjct: 121 DPAERVNEDLRLKYRYLDLRRKPMLDRLRLRHTVIKAIWDFLSAEGFVQVETPFLTRSTP 180

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EGARDFLVPSR+  G FYALPQ+PQ +KQ+LM +G DRYFQIA CFRDED R+DR P +F
Sbjct: 181 EGARDFLVPSRLEPGKFYALPQSPQLFKQMLMIAGVDRYFQIARCFRDEDLRADRQP-DF 239

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            QLD+EMSFV Q+DI    E ++  VF E      +   F R+ Y +A+ RYG+DKPD R
Sbjct: 240 TQLDLEMSFVSQEDIWAINERLVAHVFREALGVE-LPLPFPRMPYREALERYGSDKPDTR 298

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354
             + +      F +S F  F  +L           P      +R     + E A+  G  
Sbjct: 299 FGLELEPADALFANSNFNAFRSVLEAGGAVRGLRAP---AELSRKQIAGLEEVAKRYGAK 355

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GLA++       G     G +AK L+     A       + G++  F+A           
Sbjct: 356 GLAWVKV-----GEDGLSGGIAKFLDDGALRAW----GARPGETVLFVADRWNTALEALG 406

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  +A  LG I  + + F W++DFP  EW+ + +   + H+PFT P      L  +D 
Sbjct: 407 QVRLALADLLG-IERSGWNFLWVVDFPLLEWDSDLELWTYMHHPFTSPHPEDLPLLESDP 465

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YDLV NG E+  G IR H  E+  + F  +GI +E  E +FG    A + G P
Sbjct: 466 GRVRAQAYDLVLNGTEVGGGSIRIHRMELQQKMFDVLGIPREEAEEKFGFFLEALRYGAP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PHGGIA G+DR + L+ GA ++REV  FP +Q+  D L G+P+ VS EQL EL L+I E
Sbjct: 526 PHGGIAWGLDRFLALMSGAASIREVIPFPKNQSGRDPLTGAPAPVSPEQLAELHLKIEE 584


>gi|139474587|ref|YP_001129303.1| aspartyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|166225434|sp|A2RGY0|SYD_STRPG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|134272834|emb|CAM31112.1| aspartyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 582

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 224/595 (37%), Positives = 344/595 (57%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++ 
Sbjct: 1   MKRSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +RSE+V+ ++G V +R     N  + TG +EL    + IL+ A+  P  +  + E
Sbjct: 61  ATAERLRSEYVIEVEGFVEARQ--QANDKLATGMVELKVSALTILNTAKTTPFEIKDDAE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T      +F+VFS+     P  +   +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTVTVKGIDFKVFSEA----PAVKAIVVKGNADRYSRKDIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G  +  GPVAK L  + TE +  +L + + D   F+A       +     RN 
Sbjct: 353 KVT---DGQFS--GPVAKFLTAIETE-LSSQLKLAENDLVLFVADTLEVANNTLGALRNR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL    N+REV  FP +    D +  +PS VS  QL EL L+I  +
Sbjct: 527 AIGLDRFVMLLAEKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQIESH 581


>gi|291530817|emb|CBK96402.1| aspartyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 588

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 343/595 (57%), Gaps = 13/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RTH CG++    +GS V ++G+V RVR  G ++F+D+RD  GI Q+V +   + A FE 
Sbjct: 5   KRTHYCGEV--EGIGSTVTVAGFVQRVRDKGSLMFVDLRDRTGIVQLVFDDTTEPAVFEK 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK ++SE+VL   GL+  R  E+ N +I TG +E+    + ILS+A+  P  +  + +  
Sbjct: 63  AKQIKSEYVLMAQGLLRER--ESKNNDIKTGNVEILVTDLRILSMAQTTPFEIVNDTKTN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L  N++ R RI  + R       F+E  TP++  S+PEGARD+L
Sbjct: 121 EELRLKYRYLDLRRKKLQDNLIMRHRIAKTAREYFYDNGFLEIETPMMMKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ YKQLLM SGFDRY Q+A CFRDED R+DR P EF Q+D+EM
Sbjct: 181 VPSRVHEGKFYALPQSPQIYKQLLMISGFDRYIQLARCFRDEDLRADRQP-EFTQIDLEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++ D+IL   E  ++ + ++  + +  +    R+ Y+DA+ RYG+DKPD R  + + +
Sbjct: 240 SFMDVDEILELTEGFIKKLMKDVLDVDI-TIPLPRLTYNDAMSRYGSDKPDTRFGMEIQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    +EF VFS  ++              G   R   D++ E+++  G  GLAYI W
Sbjct: 299 LSDIVKDTEFSVFSSAIAAGGSVRAIVAKNAAGVLTRKEIDKLTEFSKGIGAKGLAYIRW 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D           AK L     +AI   L  + GD    +A             R  + 
Sbjct: 359 HDDA-----PNCSFAKFLKEGELDAILSELGCEKGDVVLIVADKNKVTLPVLGALRLKVG 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +++GI+  + + F WI +FPF+EW++E +     H+PFTMP          D   ++A  
Sbjct: 414 KQIGIVPDSGYNFLWITEFPFFEWDDESESWLAMHHPFTMPMEECLEYLDTDKGKVRAKA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR    E+  + F  +G++ + +E +FG L  A++   PPHGG+  
Sbjct: 474 YDLVLNGIELCSGSIRITDPELQERMFRLLGLTDKEIEEKFGFLVDAYKYAAPPHGGLGI 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+ MLL GA ++R+V  FP  ++  +L+   PS V  +QL EL ++ V + +
Sbjct: 534 GLDRLSMLLCGADSLRDVVAFPKVKDASELMSQCPSVVDDKQLEELHIKTVVSEE 588


>gi|62287533|sp|Q5X9E6|SYD_STRP6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 582

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 225/595 (37%), Positives = 345/595 (57%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++ 
Sbjct: 1   MKRSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +RSE+V+ ++G V +R     N  + TG +EL    + IL+ A+  P  +  + E
Sbjct: 61  ATAERLRSEYVIEVEGFVEARQ--QANDKLATGMVELKVSALTILNTAKTTPFEIKDDVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T      +F+VFS+     P  +   +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTVTVKGIDFKVFSEA----PAVKAIVVKGNADRYSRKDIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G +A  GPVAK L  + TE +  +L + + D   F+A       +     RN 
Sbjct: 353 KVT---DGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVADTLEVANNTLGALRNR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IARDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL    N+REV  FP +    D +  +PS VS  QL EL L+I  +
Sbjct: 527 AIGLDRFVMLLAEEDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQIESH 581


>gi|297571408|ref|YP_003697182.1| aspartyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931755|gb|ADH92563.1| aspartyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 635

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 235/620 (37%), Positives = 334/620 (53%), Gaps = 34/620 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT   G L   D+GS V L+GWV R R HGGI F+D+RD  GI Q+         E+A  
Sbjct: 33  RTRMAGSLRKEDIGSTVTLTGWVDRRRDHGGIAFIDLRDASGIAQITIRA-----EVAHE 87

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----Y 120
           +RSE+VL + G V  R     NA I TG IE+ A ++E+L+ +  LP  V    E     
Sbjct: 88  LRSEYVLKVTGTVNERPEGNANAAIPTGDIEVEAAEVEVLNPSAPLPFQVSDAAEDAGSV 147

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR    K I  R ++  + R  +    F+E  TP L  S+PEGARDF
Sbjct: 148 NEETRLKYRYLDLRRSYEQKAIRLRAKVSQAARRVLDGHEFVEIETPTLIRSTPEGARDF 207

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 208 IVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 266

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D++   E+VL+ ++        +      + Y DA+  YG+DKPDLR    + 
Sbjct: 267 MSFVEQEDVMAVAEDVLKEIWGLIG--YELPTPIPHMTYKDAMENYGSDKPDLRFEQKLI 324

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T++F ++ FRVF         Y    +   GG   R   D+  EWA+++G  GLAY+ 
Sbjct: 325 DLTDYFANTPFRVFQN------DYVGAVVMPGGGSQPRRTFDKWQEWAKARGAKGLAYVT 378

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               E G +   GPVAK+++      +        GD  FF AG+P         AR  I
Sbjct: 379 IA--EDGTIG--GPVAKNISDDERAGLLDVTGAVAGDCIFFAAGEPGPSRELLGAARLEI 434

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLK 470
            +  G+IN + + F W++D P ++  +           +      H+ FT P+       
Sbjct: 435 GKRCGLINEDDWAFVWVVDAPLFKSTKAAEAEGDVAVADGAWTAVHHAFTSPKPEWLDSF 494

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  +  A+ YD+VCNG EI  G IR H  +V  + F  +G+ +E    +FG L  AF+
Sbjct: 495 DQDPGNALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGLDEEQAREKFGFLLDAFK 554

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DRIV LL  A ++R+V  FP   N  D +  +P+ ++ +Q +E G  
Sbjct: 555 FGAPPHGGIAFGWDRIVALLTKAPSIRDVIAFPKIGNGWDPMTDAPAPITPQQRKEAG-- 612

Query: 591 IVENPKKILKISVTTILRNV 610
           +   PKK   +  T  +   
Sbjct: 613 VDAKPKKKSDVESTVNVEKT 632


>gi|205355490|ref|ZP_03222261.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205346724|gb|EDZ33356.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 615

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 242/596 (40%), Positives = 344/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+      EIA
Sbjct: 34  RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 93

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            + R+E+VL  +G +  R    IN  + TG+IE+   K+ I + +  +P     +    E
Sbjct: 94  SNARNEFVLIAEGTIRPRGEGLINPKLKTGEIEVVVSKLTIENES-AVPPFAIADESVNE 152

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 153 ELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 212

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 213 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIEMS 271

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++N  E  L+ +F+       +   F ++ Y DA+  YG+DKPDLR  +   +V
Sbjct: 272 FCEQKDVINVAETFLKDIFKACGKE--IQTPFRQMQYKDAMENYGSDKPDLRFDLKFIDV 329

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+I 
Sbjct: 330 IDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 389

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R  +
Sbjct: 390 VKED-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRIFL 444

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ N  EF W++DFP +E N++       H+PFTMP+   E     DL  I + 
Sbjct: 445 ANELKLIDPNALEFLWVVDFPMFEQNDD-GSYSAMHHPFTMPKNIDE----TDLEEISSI 499

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGGIA
Sbjct: 500 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIA 559

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+ GA N+REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 560 IGLDRLIMLVTGANNIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 615


>gi|315926757|gb|EFV06131.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 615

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 239/596 (40%), Positives = 343/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+      EIA
Sbjct: 34  RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 93

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            + R+E+VL  +G +  R    +N  + TG+IE+   K+ I + +  +P     +    E
Sbjct: 94  SNARNEFVLITEGTIRPRGEGLVNPKLKTGEIEVVVSKLTIENES-AVPPFAIADESVNE 152

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 153 ELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 212

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 213 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 271

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++   E  L+ +F+       +   F ++ Y DA+  YG+DKPDLR  +   +V
Sbjct: 272 FCEQKDVIKVAETFLKDIFKACGKE--IQTPFRQMQYKDAMENYGSDKPDLRFDLKFIDV 329

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+I 
Sbjct: 330 IDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 389

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R  +
Sbjct: 390 VKKD-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRIFL 444

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ N  EF W++DFP +E N++       H+PFTMP+   E     DL  I + 
Sbjct: 445 ANELKLIDPNALEFLWVVDFPMFEQNDD-GSYSAMHHPFTMPKNIDE----TDLEEISSI 499

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGGIA
Sbjct: 500 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIA 559

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 560 IGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 615


>gi|121612173|ref|YP_001000341.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005286|ref|ZP_02271044.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|166225336|sp|A1VZ00|SYD_CAMJJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|87250283|gb|EAQ73241.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 583

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 240/596 (40%), Positives = 344/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+      EIA
Sbjct: 2   RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            + R+E+VL  +G +  R    +N  + TG+IE+   K+ I + +  +P     +    E
Sbjct: 62  SNARNEFVLIAEGAIRPRGEGLVNPKLKTGEIEVVVSKLTIENES-AVPPFTIADESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++N  E  L+ +F+       +   F ++ Y DA+  YG+DKPDLR  +   +V
Sbjct: 240 FCEQKDVINVAETFLKDIFKACGKE--IQTPFRQMQYKDAMENYGSDKPDLRFDLKFIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R  +
Sbjct: 358 VKED-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ N  EF W++DFP +E N++       H+PFTMP+   E     DL  I + 
Sbjct: 413 ANELNLIDPNALEFLWVVDFPMFEQNDD-GSYSAMHHPFTMPKNIDE----TDLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 528 IGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|194334276|ref|YP_002016136.1| aspartyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|238693338|sp|B4S8V2|SYD_PROA2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|194312094|gb|ACF46489.1| aspartyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 608

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 283/591 (47%), Positives = 386/591 (65%), Gaps = 8/591 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFE 60
           +R+R+H CG L        VRL+GW+HR R HGG+IF+D+RDH GI Q++  P+    F+
Sbjct: 13  NRFRSHFCGRLNTEYENKQVRLAGWIHRKRDHGGLIFIDLRDHTGIAQLIIQPEKQELFQ 72

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +  E V+ + G V+ RS ET+N+ I +G IE+    +++ S A  LP PV  E + 
Sbjct: 73  KVERLHVESVIAVQGTVVKRSEETLNSRIPSGAIEVLVDDVQVESHAVALPFPVADELQT 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R  YRFLDLRR+ +H+NIV R+++I+ +R  +    F+E  TPILTASSPEGARDF
Sbjct: 133 SEELRLTYRFLDLRREKIHQNIVFRSQLISKVRRYLEDHGFMEIQTPILTASSPEGARDF 192

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGF RYFQIAPCFRDED R+DR PGEFYQ+DME
Sbjct: 193 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQVDME 252

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F+EQDD+   +E +LR + E  S        F R+ Y D + R+G+DKPDLR P+ M 
Sbjct: 253 MAFIEQDDLFEILEGMLRYLTETMSTKRITQFPFPRLSYRDVMNRFGSDKPDLRVPLEMQ 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VTE FV S F+VF+         +   +  +G   +R F D+  + AR  G PGLAY+ 
Sbjct: 313 DVTELFVGSSFKVFASNTKEGSCIKAMVLKGRGTE-SRQFYDKAEKRARELGAPGLAYVQ 371

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +R          GP+ K L+     A++ RL ++ GD  FF AG   K C      R + 
Sbjct: 372 YR-----EEGPKGPIVKFLSEAELSALQERLAIETGDVVFFGAGKWEKTCKIMGGIREYF 426

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           +    + + +   FCWI+DFP YE++E+E +IDF+HNPF+MPQG M++L   + L I A+
Sbjct: 427 SDLFEL-DRDELSFCWIVDFPLYEFDEKESRIDFSHNPFSMPQGEMDALDTMNPLDILAY 485

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  ++M +AF   G SKE V+ RFG +  AF+ G PPHGGIA
Sbjct: 486 QYDIVCNGIELSSGAIRNHRPDIMYRAFEIAGYSKEEVDKRFGHMIEAFKMGAPPHGGIA 545

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+DR+VM+L    N+REV  FPM+Q   DL+M +PS VS  QLREL L++
Sbjct: 546 PGLDRLVMILRDEHNIREVIAFPMNQQAQDLMMSAPSDVSRLQLRELHLKL 596


>gi|224024024|ref|ZP_03642390.1| hypothetical protein BACCOPRO_00741 [Bacteroides coprophilus DSM
           18228]
 gi|224017246|gb|EEF75258.1| hypothetical protein BACCOPRO_00741 [Bacteroides coprophilus DSM
           18228]
          Length = 595

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 228/598 (38%), Positives = 344/598 (57%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            +R H+CG+L ++D G  V L+GWV RVR  GG+ F+D+RD YGITQ+V N D      E
Sbjct: 11  MFRNHTCGELRIADAGKSVTLAGWVQRVRKMGGMTFVDLRDRYGITQLVFNTDVNAELCE 70

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  RS++  N N+ TG++E++ +++ +L+ A+  P  +    + 
Sbjct: 71  RASHLGREYVIQVKGTVNERSSK--NPNLPTGEVEITVEELTVLNSAQTPPFTIEDNTDG 128

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + KN+  R R+   +R  +    F+E  TP+L  S+PEGARDF
Sbjct: 129 GDDLRMKYRYLDLRRTAVRKNLELRHRMTMEVRRYLDGLGFLEVETPMLIGSTPEGARDF 188

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 189 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 247

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI+ T E + + +F+E      ++  FLR+ + DA++ YG+DKPDLR  +   
Sbjct: 248 MSFVEQEDIIETFEGMAKHLFKELRGVE-LTEPFLRMPWADAMKYYGSDKPDLRFGMKFV 306

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAY 358
            + +      F VF     +                 R   D++ E+ +    G  GL Y
Sbjct: 307 ELMDILKGYGFSVFDNAAYIGG-----ICAEGAAHYTRKQLDQLTEFVKRPQIGAKGLVY 361

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  GNV     V K  +    + ++     + GD    ++GD   K      + R
Sbjct: 362 A--RVEADGNVK--SSVDKFYSQEVLQQMKEAFGAKPGDLILILSGDDAMKTRKQLCELR 417

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  ++
Sbjct: 418 LEMGNQLGLRDKNKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDPAAV 477

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 478 RADAYDMVVNGVEVGGGSIRIHDSQLQAKMFEILGFTPEKAQEQFGFLMNAFKFGAPPHG 537

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +P  +  +QL EL L+IV+N 
Sbjct: 538 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGFLDQKQLDELNLKIVDNK 595


>gi|257066406|ref|YP_003152662.1| aspartyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798286|gb|ACV28941.1| aspartyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 582

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 216/593 (36%), Positives = 340/593 (57%), Gaps = 12/593 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACF 59
           M   RT+ CGDL + +VG  V L GWV + R  G ++F+D+RD  GITQ+V   D    +
Sbjct: 1   MEFKRTNMCGDLRIENVGDSVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVVREDDKDNY 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A+S+  E+V+ + G V  R  E+ N +I TG IE+ A KI IL  A+  P+ +  + +
Sbjct: 61  EKARSITQEYVIEVKGRVNER--ESKNPDIATGDIEIIADKINILDKAKTPPIYIKDDDD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E++R KYR+LDLR+ ++ +N+  R+ I+ +MR  M   +F E  TP LT  +PEGARD
Sbjct: 119 VSENLRLKYRYLDLRKPSVQRNLKLRSDIVRTMREYMYNNDFTEVETPFLTKPTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+N+G FYALPQ+PQ  KQ+LM    DRYFQ+  CFRDED R++R P EF QLD+
Sbjct: 179 YLVPSRINEGKFYALPQSPQLLKQILMIGSLDRYFQVVKCFRDEDLRANRQP-EFTQLDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF +QDD++   E +L+ +F+++++ + +     R+ Y +AI  YG+DKPDLR    +
Sbjct: 238 EMSFSDQDDVIAMNEGLLKELFDKYTDYD-LKLPIDRMDYSEAITSYGSDKPDLRYGYKI 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V+  F +S+F+VF+   S                 +R   D++ ++ +  G  GL+YI
Sbjct: 297 TDVSSVFENSDFKVFADNTSDGRSVRAINFKNIADNYSRKQLDKLTDFVKDYGLKGLSYI 356

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  D          + K L       ++ +L+M+DGD     A             R  
Sbjct: 357 KYSED------IQSSIKKFLTDDVIAGLKDKLEMEDGDLILIGADKNKTVLEAMGALRRK 410

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A++  +I    +  CW+++FP +E++EEE +    H+PFTMP      L   +   ++ 
Sbjct: 411 VAKDNDLIEKE-YALCWVVNFPMFEYSEEEDRYVSQHHPFTMPNEEDIDLLLTEPEKVRT 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G +R + S++  + F  + +S E ++N+FG    A Q G PPH G+
Sbjct: 470 QAYDIVINGDEMGGGSVRINNSDLQEKVFEALKLSDEDIKNKFGFFIEALQYGTPPHAGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VML     N++++  FP +Q+    L  +PS V  + L EL +++ 
Sbjct: 530 AYGLDRLVMLFAKTDNIKDIIAFPKTQSATCPLTEAPSLVDEKALEELNIKLR 582


>gi|197121726|ref|YP_002133677.1| aspartyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|238689889|sp|B4UIE3|SYD_ANASK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|196171575|gb|ACG72548.1| aspartyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 603

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 222/602 (36%), Positives = 335/602 (55%), Gaps = 16/602 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTHSCG+L  +D+G  V L GWV+  R HGG +F+D+RD  G+TQVV   D      E+
Sbjct: 9   KRTHSCGELTKADIGKEVVLFGWVNNRRDHGGAVFIDLRDRAGLTQVVFEEDVRPDVHEL 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +R E+ + + G V+SR    +N  + TG+IE+ A  +EI + +E  P  +  E +  
Sbjct: 69  AGQLRLEYCVGVRGKVVSR-GGNVNPKLRTGEIEVHASDLEIFNRSEPAPFQIEDEIDTG 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R +YR+LDLRR  L + ++ R ++ +  R       F+E  TP +   +P GAR+FL
Sbjct: 128 EEKRLQYRYLDLRRAPLQRTLMTRAKVNHLTRNYFTDGGFLELETPFMVKYTPGGARNFL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYAL ++PQ +KQL M +GFDRYFQI  CFRDED R DR P EF Q+D+EM
Sbjct: 188 VPSRLNPGKFYALAESPQLFKQLYMMAGFDRYFQIVRCFRDEDLRLDRQP-EFTQIDVEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI---I 298
           SFVEQ+D+ + ME ++  +++E          F R+ +++++ +YG DKPDLR  +   +
Sbjct: 247 SFVEQNDVFDVMEGLVVKLWKEVLGIEI-PRPFQRMPFEESMAKYGNDKPDLRFDMPHVV 305

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + ++          +  + +      +   +PA     +R   D++ E+ +  G  GLA 
Sbjct: 306 LTDLVRQHDGGGVPLMHEAVKGKGIVKAMRVPA-SANFSRTEIDKLEEYVKGMGAKGLAR 364

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                   G      P+AK +     +AI    + + GD   F  G      +  A+ R 
Sbjct: 365 AKV---GEGGEWTQSPLAKTITPALRQAINEACEAKPGDLLLFQFGKDSVVHTVMANLRV 421

Query: 419 HIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           H+A+ +G+I        + F W+++ P +E++EE  +   AH+ FT P         +D 
Sbjct: 422 HLAKRMGLIPEYGSGGAWRFLWVVNPPLFEYDEESGQWAAAHHAFTRPHDSDLQFLESDP 481

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             +  ++YDLV NGFEI  G IR H  EV  + F  +GIS E   ++FG L  A + G P
Sbjct: 482 GKVNCYRYDLVLNGFEIGGGSIRLHDPEVQARVFKAMGISDEEARSKFGFLLDALKMGAP 541

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL GA+++R+V  +P +Q   DL+ G+P  V   QLREL ++    
Sbjct: 542 PHGGIALGMDRLVMLLTGAESLRDVVAWPKTQKGTDLMTGAPGDVDARQLRELYVKSTYE 601

Query: 595 PK 596
           PK
Sbjct: 602 PK 603


>gi|97196950|sp|Q48QS8|SYD_STRPM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 582

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 346/595 (58%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++ 
Sbjct: 1   MKRSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +RSE+V+ ++G V +R     N  + TG +EL    + IL+ A+  P  +  + E
Sbjct: 61  ATAERLRSEYVIEVEGFVEARQ--QANDKLATGMVELKVSALTILNTAKTTPFEIKDDVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T      +F+VFS+     P  +   +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTVTVNGIDFKVFSEA----PAVKAIVVKGNADRYSRKDIDKLTEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G +A  GPVAK L  + TE +  +L + + D   F+A       +     RN 
Sbjct: 353 KVT---DGQLA--GPVAKFLIAIETE-LSSQLKLAENDLVLFVADTLEVANNTLGALRNR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 IAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I  +
Sbjct: 527 AIGLDRFVMLLAGKGNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQIESH 581


>gi|225013098|ref|ZP_03703512.1| aspartyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225002756|gb|EEG40738.1| aspartyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 586

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 222/600 (37%), Positives = 332/600 (55%), Gaps = 19/600 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACF 59
            YRTH CG+L +  +   V LSGWV + R  G II+ D+RD YGITQ++ + +    A F
Sbjct: 1   MYRTHHCGELSLEHLNQTVTLSGWVQKNRNKGFIIWTDLRDRYGITQLIFDEERTPKAVF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A+ +  E+V+ I G V+ R  E+ NAN+ TG IE+  + + +L+ ++  P  +  + +
Sbjct: 61  EKAQGLGREFVIQIQGKVIER--ESKNANMNTGDIEVLVENLTLLNASKTPPFTIEDQTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LD+RR+ + + ++ R+++  ++R  +    FI+  TP L  S+PEGARD
Sbjct: 119 GGEELRMQFRYLDIRRNPVKQKLMFRSKVSMAVRNYLTDAGFIDVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DILN  E + + + +           F R+ YD+A++ YG DKPD+R  +  
Sbjct: 238 EMTFVEQEDILNQFEGLTQHLLKSIKGIE--PKPFPRMSYDNAMKIYGNDKPDIRFGMTF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             + +      F VF             A+P K     R   D + +W +    G  GL 
Sbjct: 296 CELNDLAQGKGFGVFDS----QELVVGIAVP-KAAEMTRKEIDGLIDWVKRPQIGAKGLI 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++    D     +    V K  N  +      R D   GD    ++GD     +  +  R
Sbjct: 351 WVKCNADG----SHKSSVDKFFNAEDLAQWAERCDAIAGDLILVLSGDANTTRTQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + + LG+     F   W+ DFP  EW+EE K+    H+PFT P+     L   D  ++
Sbjct: 407 MELGERLGLRKPEEFAPLWVTDFPLLEWDEESKRYHAMHHPFTSPKPDQLELLKTDPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA  YDLV NG EI  G IR H   +  Q F  +G SK   + +FG L  AFQ G PPHG
Sbjct: 467 KANAYDLVLNGNEIGGGSIRIHDQALQSQMFDLLGFSKAEAQAQFGFLMDAFQFGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           GIA G+DR+V +L G + +R+   FP + +  D+++ +P+ ++  QL EL L+ +   KK
Sbjct: 527 GIAFGLDRLVAILGGEETIRDFIAFPKNNSGRDIMIDAPAEINPSQLEELSLKSIVAKKK 586


>gi|86151553|ref|ZP_01069767.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|86153398|ref|ZP_01071602.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85841182|gb|EAQ58430.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85843124|gb|EAQ60335.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 583

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 240/596 (40%), Positives = 344/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+      EIA
Sbjct: 2   RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            + R+E+VL  +G +  R    +N  + TG+IE+   K+ I + +  +P     +    E
Sbjct: 62  SNARNEFVLIAEGAIRPRGEGLVNPKLKTGEIEVVVSKLTIENES-AVPPFAIADESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++N  E  L+ +F+       +   F ++ Y DA+  YG+DKPDLR  +   +V
Sbjct: 240 FCEQKDVINVAETFLKDIFKACGKE--IQTPFRQMQYKDAMENYGSDKPDLRFDLKFIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R  +
Sbjct: 358 VKED-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ N  EF W++DFP +E N++       H+PFTMP+   E     DL  I + 
Sbjct: 413 ANELNLIDPNALEFLWVVDFPMFEQNDD-GSYSAMHHPFTMPKNIDE----TDLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 528 IGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|257462976|ref|ZP_05627380.1| aspartyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060593|ref|ZP_07925078.1| aspartyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313686269|gb|EFS23104.1| aspartyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 594

 Score =  593 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 233/600 (38%), Positives = 350/600 (58%), Gaps = 14/600 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
           YR+H+ G+L   ++G  V LSGWV   R  GG+ F+D+RD  G TQ+V + D       E
Sbjct: 3   YRSHNLGELRKGNIGQVVTLSGWVDTKRDLGGLTFIDLRDREGKTQIVFDIDYTSRDIIE 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
            A+ +R+E V+ + G V  R+++  N NI TG+IE+  +++EIL+  E LP  + G E  
Sbjct: 63  KAQKLRNEAVIKVVGEVKERASK--NLNIPTGEIEVFVKELEILNQCEVLPFQITGIEEN 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+IR KYR+LD+RR  + +N+  R R+I ++R  M    F++  TPILT S+PEGARD
Sbjct: 121 LNENIRLKYRYLDIRRPNMIQNLKMRHRMIMAIRNYMDQAGFLDVDTPILTKSTPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR+N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD+
Sbjct: 181 FLVPSRINGGTFYALPQSPQIFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLDV 239

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV QD+++N +E + + VF+  +     +  F R+ Y  A+  YG+DKPDLR  + +
Sbjct: 240 EMSFVTQDEVMNEIEGLAKYVFKHVTGEE-ANYTFERMPYAVAMGEYGSDKPDLRFEVKL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAY 358
            ++++    S F+ FS  +      +    P      +R       ++A+   G  G+AY
Sbjct: 299 KDISDLAAKSSFKAFSSTVENGGIVKAIVAPKAFEKFSRKLLGEYEDYAKQYFGAKGMAY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  ++ E+G ++   P+AK       +AI  R   + GD    IA       +     R 
Sbjct: 359 I--KIAENGEIS--SPIAKFFREEEMKAILDRTGAEAGDVILIIADRVKTVHAALGALRL 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLSI 477
            + +ELG+I+ N ++F W++DFP +E++EEE +    H+PFT + +  ME        +I
Sbjct: 415 RVGKELGLIDRNAYKFLWVVDFPMFEYDEEEGRYKAEHHPFTSIKEEDMEKFLQGQTDNI 474

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +   YDLV NG EI  G IR   +EV  + F  + +S E  + +FG    AFQ G PPHG
Sbjct: 475 RTDTYDLVLNGSEIGGGSIRISNTEVQAKVFERLSLSPEEAKEKFGFFLEAFQYGAPPHG 534

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+A GIDR +M++L  +++R+V  FP +     L+  +P  V  +QL EL L      ++
Sbjct: 535 GLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPGKVEEKQLEELFLHSTFQEEE 594


>gi|58698523|ref|ZP_00373426.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630146|ref|YP_002726937.1| aspartyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|254781763|sp|C0R2K4|SYD_WOLWR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|58534965|gb|EAL59061.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592127|gb|ACN95146.1| aspartyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 600

 Score =  593 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 290/606 (47%), Positives = 400/606 (66%), Gaps = 19/606 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+ Y+TH+C +L  +DV   V LSGW++R R HG +IF+D+RD YGITQ+V N D   F+
Sbjct: 1   MNCYKTHTCNELRKNDVEKEVTLSGWLYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF----- 115
              +++ E V+ + G+V +R+ +T+N++I TG+IE+    + + S  E            
Sbjct: 61  EISNLKLESVITVTGIVEARTEDTVNSSISTGEIEVIVNNLRVESEVEFHFDEEIAKEER 120

Query: 116 -------GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                  GE+EYPE++RFKYRFLDLRR+ +  NI+ R++II  +R  MI   F+E  TPI
Sbjct: 121 SILASITGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIIAELRKLMIERGFLEIQTPI 180

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D
Sbjct: 181 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARAD 240

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           R PGEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F RI Y +A+ +YG+
Sbjct: 241 RSPGEFYQLDLEMSFVTQEDIFQIIESTLYRVFAKFS-RKSVDKDFPRITYKEAMLKYGS 299

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           DKPDLRNP+++ +VTE F  S F +F   +           P K     R+F D+  E A
Sbjct: 300 DKPDLRNPLLISDVTEIFRDSGFNIFKSNIERGMVVRAIPAP-KTAEEPRSFFDKKIEHA 358

Query: 349 -RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407
            +  G  GL YI +      +    GP+AK L+      IR   +++ GDS FF +    
Sbjct: 359 QKEFGAKGLGYITF----DKDGTAKGPIAKFLDENRLNHIREATNIEPGDSVFFASDKEN 414

Query: 408 KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
           +  + A   R  +  EL +I+ N F+FCWI+DFP++ ++++ KKIDF HNPF+MP GG++
Sbjct: 415 EAANIAGKVRTLLGSELSLIDDNIFKFCWIIDFPYFVYDDKSKKIDFFHNPFSMPHGGLK 474

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
            L+  + L I A+QYDLVCNG E++SG IRN+  ++M +AF+  G S+  V+ RFG L R
Sbjct: 475 DLEDKNPLDILAYQYDLVCNGIELSSGAIRNNKLDIMYKAFAIAGYSRGEVDTRFGALVR 534

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G+PPHGGIA G+DRIVMLL    N+REV  FPM+Q   D+LMG+PS V  + LREL
Sbjct: 535 AFRFGVPPHGGIAPGVDRIVMLLADEPNIREVICFPMNQQGEDVLMGAPSKVEDKHLREL 594

Query: 588 GLRIVE 593
            L+++E
Sbjct: 595 SLKVIE 600


>gi|150008039|ref|YP_001302782.1| aspartyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|256840784|ref|ZP_05546292.1| aspartyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|298376609|ref|ZP_06986564.1| aspartate--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|301309864|ref|ZP_07215803.1| aspartate--tRNA ligase [Bacteroides sp. 20_3]
 gi|166225371|sp|A6LBU6|SYD_PARD8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|149936463|gb|ABR43160.1| aspartyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|256738056|gb|EEU51382.1| aspartyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|298266487|gb|EFI08145.1| aspartate--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|300831438|gb|EFK62069.1| aspartate--tRNA ligase [Bacteroides sp. 20_3]
          Length = 585

 Score =  593 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 227/598 (37%), Positives = 337/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFE 60
            YRT +CGDL ++D G  V L+GWV + R  GG+ F+DIRD YGITQ+V N   D+A  E
Sbjct: 1   MYRTRTCGDLRLADEGLVVTLAGWVQKTRKMGGMTFVDIRDRYGITQLVFNQEVDAALCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  RS++  NA+I TG IEL   ++ +L+ A   P  +  E + 
Sbjct: 61  KANKLGREFVIQVTGTVRERSSK--NAHIPTGDIELIVSELNVLNTALTPPFTIEEETDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + KN+  R R+   +R  +  + F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRACVRKNLELRHRMAFEVRRYLDEQGFLEVETPVLVNSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+LN  E + + +F+         + F+R+ + DA+++YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDVLNMFEGMAKHLFKVIRGVEFKES-FMRMTWQDAMKQYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAY 358
            + +      F VF     +                 R   D + E+ +    G  GL Y
Sbjct: 297 ELMDIMKGHGFSVFDNAAYIGG-----ICAEGAASYTRKQLDALTEFVKRPQVGAKGLVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  GNV     V K  +    + ++     + GD    ++GD   K      + R
Sbjct: 352 A--RVEADGNVK--SSVDKFYSQEVLQEMKNAFGAKPGDLILILSGDDAMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + + F   W++DFP +EWNE++++    H+PFT P      L   D  ++
Sbjct: 408 LEMGNQLGLRDKDKFVCLWVIDFPLFEWNEDDQRFYAMHHPFTSPNPDDIPLLDTDPGAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H S++  + F  +G ++E  + +FG L  AF+ G PPHG
Sbjct: 468 RANAYDMVINGVEVGGGSIRIHDSQLQDKMFKLLGFTEERAQEQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +P  +   QL EL L +    
Sbjct: 528 GLAYGLDRFVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGVLDPAQLDELNLIVDIKK 585


>gi|120437415|ref|YP_863101.1| aspartyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117579565|emb|CAL68034.1| aspartyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 586

 Score =  593 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 219/596 (36%), Positives = 343/596 (57%), Gaps = 19/596 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SAC 58
           + YR+H+CG+L    +G+ V LSGWV +VR  G +I++D+RD YG+TQ++ + +      
Sbjct: 4   NMYRSHTCGELNAQQIGNKVTLSGWVQKVRNKGFMIWVDLRDRYGLTQLIFDEERSSKKL 63

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            + A S+  E+V+ ++G V+ R  E+ N NI TG+IE+  +  +IL+ ++  P  +  + 
Sbjct: 64  MDKAGSLAREFVIQVEGTVIER--ESKNPNIATGEIEVLVEDFKILNSSKTPPFTIEDDT 121

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E +R KYR+LD+RR+ +   ++ R ++   +R  +  E FIE  TP L  S+PEGAR
Sbjct: 122 DGGEDLRMKYRYLDIRRNPVKNKLMFRHQVGMKVRNFLSNEGFIEIETPYLIKSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DF+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D
Sbjct: 182 DFVVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQID 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            EM+FV+Q+DILN  E++ R + ++    +     F R+ YDDA+++YG DKPD+R  + 
Sbjct: 241 CEMAFVDQEDILNIFESLTRHLLKDIKGVDVAE--FPRMTYDDAMKKYGNDKPDIRFGME 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGL 356
              + +   +  F VF +           A+P       R   D++  W +    G  GL
Sbjct: 299 FAELDDIAKNKGFNVFDQ----QELVVGIAVP-GAASFTRKEIDKLISWVKRPQVGANGL 353

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +  +  +E G +     V K  +    +        + G+    +AGD  K  +  +  
Sbjct: 354 VWAKY--NEDGTLK--SSVDKFYSQDALKNWAEATGAKPGNLILVMAGDAAKTRTQLSAL 409

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R H+  ELG+   + F   W++DFP  EW+EE ++    H+PFT P+    +L  ++   
Sbjct: 410 RMHLGNELGLRKADEFAPLWVVDFPLLEWDEETERFHAMHHPFTSPKKEDFALLESEPGK 469

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YDLV NG EI  G IR H  E   Q F  +G + E  + +FG L  AFQ G PPH
Sbjct: 470 VRANAYDLVLNGNEIGGGSIRIHDKETQSQMFKYLGFTPEEAKEQFGFLMDAFQYGAPPH 529

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GGIA G DR+V +L G +++R+   FP + +  D+++ +P+ +  +QL +L LR+ 
Sbjct: 530 GGIAFGFDRLVAILGGQESIRDFIAFPKNNSGRDVMIDAPAKLDEQQLSDLHLRLK 585


>gi|116074179|ref|ZP_01471441.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetase, class I
           [Synechococcus sp. RS9916]
 gi|116069484|gb|EAU75236.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetase, class I
           [Synechococcus sp. RS9916]
          Length = 611

 Score =  593 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 218/614 (35%), Positives = 339/614 (55%), Gaps = 20/614 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL    +   V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSNGCGDLRKQQIDEQVKLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGAEAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           + +RSE VL + G V +R  E++N  + TG +E+ A  I +L+  +     P+ +  E  
Sbjct: 62  EHLRSETVLQVSGKVRARPTESLNDRLATGDVEVLASAITVLNGVKGNLPFPVSIHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR  ++ N+  R + I + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAQTIQTARSFLEDEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G ++Y+Q+A CFRDED R+DR P EF QLDM
Sbjct: 182 YILPSRVCGGEWFALPQSPQLFKQLLMVGGIEKYYQVARCFRDEDLRADRQP-EFTQLDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ Q++IL+  E ++  +++       +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 241 EMSFMGQEEILDLNERLICSIWKTVKGIE-LPRPFPRMTWHDAMERYGTDRPDTRYCMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
            NV++      F+VFS  +      +  A+P      +         +   A+  G  GL
Sbjct: 300 TNVSDIVKDMGFKVFSGAVKNGGSVKCIAVPGGNDAVSNVRIKPGGDVFSEAQQAGAGGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  R+ + G +  +G +  +L+      +  R   + G    F AGD           
Sbjct: 360 AFI--RVRDGGEIDSIGAIKDNLSEEQKAELLSRTGAEPGTLILFGAGDTATVNKALDRV 417

Query: 417 RNHIAQELGIINCNC----FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMES 468
           R ++A+ELG++  +     + F W++DFP +E+N +E + +  H+PF  P     G    
Sbjct: 418 RQYLARELGMVKPDQDNDQWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNTDDLGSDAD 477

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              N L   +A  YDLV NG E+  G +R H S +  Q    VG+  E  + +FG L  A
Sbjct: 478 QWANTLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQEQFGFLIEA 537

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
              G PPHGG+A G+DR+VMLL G +++R+   FP +Q    L+  +P+ V+ +QL EL 
Sbjct: 538 LDMGAPPHGGLAFGLDRMVMLLAGEESIRDTIAFPKTQQARCLMTAAPAGVAGKQLEELH 597

Query: 589 LRIVENPKKILKIS 602
           +       K  +  
Sbjct: 598 VASTWVDPKADEED 611


>gi|325474142|gb|EGC77330.1| aspartyl-tRNA synthetase [Treponema denticola F0402]
          Length = 590

 Score =  593 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 240/596 (40%), Positives = 344/596 (57%), Gaps = 9/596 (1%)

Query: 1   MHRY-RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SA 57
           M +  RT +CG L     G  V L+GW+HR R HGGI FL++RD YG+TQVV + D    
Sbjct: 1   MEKMQRTVTCGGLNKDFAGKTVVLNGWIHRKRDHGGITFLNLRDRYGLTQVVVDDDASEE 60

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
              +A S++ E+ + ++GLV  R    IN  + TG+IE+ A KIE+LS +E LP  +  +
Sbjct: 61  LKALAISLKQEFCIAVEGLVRPRPDSMINKEMATGEIEVKALKIEVLSKSEVLPFQIDEK 120

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R KYR+LDLR   +  +I+ R++   ++R  + +++F+E  TP    S+PEGA
Sbjct: 121 TNANEDLRLKYRYLDLRSKAMQDHIMLRSKFTFAVREFLTSKDFLEIETPTFIKSTPEGA 180

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSR+  G FYALPQ+PQ YKQ+LM SGFD+YFQIA C+RDED R DR P EF Q+
Sbjct: 181 RDYLVPSRLYPGKFYALPQSPQIYKQILMVSGFDKYFQIARCYRDEDARGDRQP-EFTQI 239

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSF  ++D+L+  E +++  F++  N + +   F RI YD+AI  YGTDKPDLR  +
Sbjct: 240 DLEMSFASREDVLSLTEGMMQYAFKKSINVD-LPKTFERISYDEAIDVYGTDKPDLRFEM 298

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            M +         F VF   +S     +   +  +    +R   + +   A+     GLA
Sbjct: 299 KMQDAAFMAEIGNFAVFKDAVSSGGAVKALVVKGQAEAYSRKKIEELEAAAKIYKAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +I       G     G ++K       E I  +L  + GD   F+A      C+     R
Sbjct: 359 WIKVT---EGGAKFEGGISKFFEGKEAE-ICSKLGAEKGDLILFVADKYKIACTALGAVR 414

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           + + ++LG++N   F+F WI+DFP +EWNEEE K D AH+ F+ PQ    +    +   +
Sbjct: 415 SKLGKDLGLLNPAEFKFVWIVDFPLFEWNEEENKWDPAHHMFSAPQEKYIATMEENPEPV 474

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K   YDLV NG+E+ASG IR H  E+  + F  VG  +   E +FG L  AF+ G PPHG
Sbjct: 475 KGDLYDLVLNGYEVASGSIRIHNPELQKRIFKIVGFDESEAEKKFGFLTEAFKYGAPPHG 534

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIA G+DRIVM++ G  +++EV  FP +      +  SPS V  +QL EL L I E
Sbjct: 535 GIAPGLDRIVMIMAGETSIKEVIAFPKNSFAVSPMDDSPSEVDQKQLDELHLAIKE 590


>gi|262381384|ref|ZP_06074522.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262296561|gb|EEY84491.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 585

 Score =  593 bits (1529), Expect = e-167,   Method: Composition-based stats.
 Identities = 227/598 (37%), Positives = 337/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFE 60
            YRT +CGDL ++D G  V L+GWV + R  GG+ F+DIRD YGITQ+V N   D+A  E
Sbjct: 1   MYRTRTCGDLRLADEGLVVTLAGWVQKTRKMGGMTFVDIRDRYGITQLVFNQEVDAALCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  RS++  NA+I TG IEL   ++ +L+ A   P  +  E + 
Sbjct: 61  KANKLGREFVIQVTGTVRERSSK--NAHIPTGDIELIVSELNVLNSALTPPFTIEEETDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + KN+  R R+   +R  +  + F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRACVRKNLELRHRMAFEVRRYLDEQGFLEVETPVLVNSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+LN  E + + +F+         + F+R+ + DA+++YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDVLNMFEGMAKHLFKVIRGVEFKES-FMRMTWQDAMKQYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAY 358
            + +      F VF     +                 R   D + E+ +    G  GL Y
Sbjct: 297 ELMDIMKGHGFSVFDNAAYIGG-----ICAEGAASYTRKQLDALTEFVKRPQVGAKGLVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  GNV     V K  +    + ++     + GD    ++GD   K      + R
Sbjct: 352 A--RVEADGNVK--SSVDKFYSQEVLQEMKNAFGAKPGDLILILSGDDAMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + + F   W++DFP +EWNE++++    H+PFT P      L   D  ++
Sbjct: 408 LEMGNQLGLRDKDKFVCLWVIDFPLFEWNEDDQRFYAMHHPFTSPNPDDIPLLDTDPGAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H S++  + F  +G ++E  + +FG L  AF+ G PPHG
Sbjct: 468 RANAYDMVINGVEVGGGSIRIHDSQLQDKMFKLLGFTEERAQEQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +P  +   QL EL L +    
Sbjct: 528 GLAYGLDRFVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGVLDPAQLDELNLIVDIKK 585


>gi|189485338|ref|YP_001956279.1| aspartyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|226736547|sp|B1GZY6|SYD_UNCTG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|170287297|dbj|BAG13818.1| aspartyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 584

 Score =  593 bits (1529), Expect = e-167,   Method: Composition-based stats.
 Identities = 231/593 (38%), Positives = 345/593 (58%), Gaps = 10/593 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEI 61
             R+  CGD+  S +G  + + GWVH  R HGG+IF+D+RD  GI Q+V  P+    FE 
Sbjct: 1   MKRSGYCGDIRESSIGKEIAVCGWVHSRRDHGGVIFIDLRDREGILQIVFQPENKEIFEA 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ + G V +R   T+N N+ TG +EL A +++IL+ +  LP  +    +  
Sbjct: 61  AEKLRSEYVIAVKGWVRNRPFGTLNTNMSTGNVELVAVELKILNTSPGLPFEISDYIDTS 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L KN V R +I   +R  +  E F+E  TP LT S+PEGARDFL
Sbjct: 121 EELRLKYRYLDLRRPNLQKNFVMRHKISKEIRNFLNEEGFLEIETPFLTKSTPEGARDFL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ G+F+ALPQ+PQ +KQ+LM++GFD+Y+QI  CFRDED R+DR P EF Q+D+EM
Sbjct: 181 VPSRLHHGNFFALPQSPQLFKQILMSAGFDKYYQIVRCFRDEDLRADRQP-EFTQVDVEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++D++  +E +L  VF+   N +     F R+ Y +A+ R+G+DKPD R  + + +
Sbjct: 240 SFVDEEDVMVVIERMLARVFKMTLNLDI-KMPFERMPYSEAMLRFGSDKPDTRFEVEIKD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            +    +S F VFS ++S         IP KG   +R+    + ++    G  GL ++  
Sbjct: 299 FSRELKNSGFSVFSSVISKGGIVRGLCIP-KGASFSRSEIAGLTKFVGEYGAKGLVWMKI 357

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                        + K+           +L+ + GD   F+A +           R  + 
Sbjct: 358 TDT-----GADSNIVKYFKEYEIRVFISKLNAKSGDLIVFLADEEKTVAQGLGALRLKVG 412

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +E G+I+ N F F W++DFP  EW++EE++    H+PFT+P+    SL   +    KA  
Sbjct: 413 RESGLIDKNKFNFLWVVDFPLMEWDKEEQRWQALHHPFTLPKDAD-SLTKENAGRAKAKA 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H S +  + F+ + IS E  E +FG L +A   G PPHGG A 
Sbjct: 472 YDVVLNGIELGGGSIRIHKSGIQKKIFNILDISDESAEKKFGFLLKALTYGAPPHGGAAL 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G DR+  L+ G  ++REV  FP +Q   D L  +P+ VS   L+ELGL+ +EN
Sbjct: 532 GFDRLCALISGEDSIREVIAFPKTQKAVDPLSNAPAAVSDNHLKELGLQQIEN 584


>gi|312865833|ref|ZP_07726055.1| aspartate--tRNA ligase [Streptococcus downei F0415]
 gi|311098708|gb|EFQ56930.1| aspartate--tRNA ligase [Streptococcus downei F0415]
          Length = 582

 Score =  593 bits (1529), Expect = e-167,   Method: Composition-based stats.
 Identities = 220/595 (36%), Positives = 345/595 (57%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +GS + L GWV R R  GG++F+D+RD  GI Q+V NP+    EI 
Sbjct: 1   MKRSIYAGRVRSEHIGSQLTLKGWVGRRRDLGGLVFIDLRDREGIMQLVINPEQVSKEIM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+R+E+V+ + G   +R  E  N  + TG +EL    + IL+ ++  P  +  + E
Sbjct: 61  DKAESLRTEYVIEVTGTAQAR--EQANDKLATGAVELQVSDLVILNTSKTTPFEIKDDAE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR ++ KN+  R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 MTDDNRLRYRYLDLRRPSMLKNLKLRAKVTHSVRNYLDELEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +G DRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSQGHFYALPQSPQITKQLLMNAGLDRYYQIVKCFRDEDLRGDRQP-EFTQIDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+++++I    E ++  V +E    + V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLDEEEIQEITEGLIARVMKETKGID-VTLPFPRMAYDDAMNNYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T+     +F+VF++     P  +   +       +R   D++ + A+  G  GLA++
Sbjct: 297 QDLTDTVKDIDFKVFAQA----PAVKAIVVKDAADKYSRKAIDKLTDVAKQYGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +      +    GP+AK L     + +  RL + D D   F+A       +     R  
Sbjct: 353 KYM-----DGKVTGPIAKFLT-AIADKLTERLQLVDNDLVLFVADSLEVANTTLGALRTR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+EL +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  ++A
Sbjct: 407 LAKELDLIDQSQFNFLWVVDWPMFEWSEEEDRYMSAHHPFTLPTQETADQLEGDLSKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  +    +G S+E    +FG L  A   G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINHKDLQERMLKALGFSQESANEQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VM+L G  N+REV  FP +    D +  +PS V+ +QL EL L++ ++
Sbjct: 527 AIGLDRFVMILAGQDNIREVIAFPKNNKASDPMTQAPSLVAQKQLEELALQVQDH 581


>gi|291557677|emb|CBL34794.1| aspartyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 588

 Score =  593 bits (1529), Expect = e-167,   Method: Composition-based stats.
 Identities = 225/595 (37%), Positives = 343/595 (57%), Gaps = 13/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RTH CG++    +GS V ++G+V RVR  G ++F+D+RD  GI Q+V +   + A FE 
Sbjct: 5   KRTHYCGEV--EGIGSTVTVAGFVQRVRDKGSLMFVDLRDRTGIVQLVFDDTTEPAVFEK 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK ++SE+VL   GL+  R  E+ N +I TG +E+    + ILS+A+  P  +  + +  
Sbjct: 63  AKQIKSEYVLMAQGLLRER--ESKNNDIKTGNVEILVTDLRILSMAQTTPFEIVNDTKTN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L  N++ R RI  + R       F+E  TP++  S+PEGARD+L
Sbjct: 121 EELRLKYRYLDLRRKKLQDNLIMRHRIAKTAREYFYDNGFLEIETPMMMKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++G FYALPQ+PQ YKQLLM SGFDRY Q+A CFRDED R+DR P EF Q+D+EM
Sbjct: 181 VPSRVHEGKFYALPQSPQIYKQLLMISGFDRYIQLARCFRDEDLRADRQP-EFTQIDLEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++ D+IL   E  ++ + ++  + +  +    R+ Y+DA+ RYG+DKPD R  + + +
Sbjct: 240 SFMDVDEILELTEGFIKKLMKDVLDVDI-TTPLPRLTYNDAMSRYGSDKPDTRFGMEIQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    +EF VFS  ++              G   R   D++ E+++  G  GLAYI W
Sbjct: 299 LSDIVKDTEFSVFSSAIAAGGSVRAIVAKNAAGVLTRKEIDKLTEFSKGIGAKGLAYIRW 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D           AK L     +AI   L  + GD    +A             R  + 
Sbjct: 359 HDDA-----PNCSFAKFLKEGELDAILSHLGCEKGDVVLIVADKNKVTLPVLGALRLKVG 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +++GI+  + + F WI +FPF+EW++E +     H+PFTMP          D   ++A  
Sbjct: 414 KQIGIVPDSGYNFLWITEFPFFEWDDESESWLAMHHPFTMPMEECLEYLDTDKGKVRAKA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR    E+  + F  +G++ + +E +FG L  A++   PPHGG+  
Sbjct: 474 YDLVLNGIELCSGSIRITDPELQERMFRLLGLTDKEIEEKFGFLVDAYKYAAPPHGGLGI 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+ MLL GA ++R+V  FP  ++  +L+   PS V  +QL EL ++ + + +
Sbjct: 534 GLDRLSMLLCGADSLRDVVAFPKVKDASELMSQCPSVVDDKQLEELHIKTMVSEE 588


>gi|260903842|ref|ZP_05912164.1| aspartyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 594

 Score =  593 bits (1529), Expect = e-167,   Method: Composition-based stats.
 Identities = 239/604 (39%), Positives = 330/604 (54%), Gaps = 32/604 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H  G L  S  G  V LSGWV R R HGG+ F+D+RD  GI QVV   D      A +
Sbjct: 3   RSHETGSLRASHAGQTVTLSGWVDRRRDHGGVAFIDLRDASGIVQVVVREDD-----AHA 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----Y 120
           +R+E V+ + G V  R     NAN+ TG IE+   K+EILS AE LP  V    E     
Sbjct: 58  LRNESVVKVTGTVSLRPEGNTNANLPTGDIEVIDTKVEILSQAEALPFQVSDHAEDAGTV 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR+LDLRR      +  R+    + R  +  ++F+E  TP LT S+PEGARDF
Sbjct: 118 GEETRLRYRYLDLRRSGPAATMRLRSAANRAARNVLDEQDFLEIETPTLTRSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLL  +G +RY+Q+A C+RDED R+DR P EF QLD+E
Sbjct: 178 LVPARLQPGSWYALPQSPQLFKQLLQVAGMERYYQMARCYRDEDFRADRQP-EFTQLDIE 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SFVEQ+DI+   E +L  +++     + ++     I Y +A+ +YG+DKPDLR  + +H
Sbjct: 237 ASFVEQEDIIELAEKILVALWKLIG--HEITTPIPHITYAEAMEKYGSDKPDLRFELELH 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           N+T+ F  + FRVF         Y    +   GG   R   D   +WA+ +G  GLAY+ 
Sbjct: 295 NLTDFFKDTPFRVFQS------EYVGSVVYPGGGSLPRRQLDGWQDWAKQRGAKGLAYVL 348

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             + E G +   GPVAK+++      +        GD+ FF AGDP    S    ARN I
Sbjct: 349 --VAEDGTLT--GPVAKNISEDEKAGLVEAAGANPGDAIFFAAGDPASSRSLLGAARNEI 404

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLK 470
           A+  G+I    + F W++D P +E              E      H+ FT P+       
Sbjct: 405 AERTGLIKEGDWAFVWVVDAPLFESAAAAQAAGDVAVGEGSWTAVHHAFTAPKPEFLDTL 464

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            +D  +  A+ YD+VCNG EI  G IR H  +V  + F  +GIS+E  + +FG L  AF+
Sbjct: 465 ESDPGAALAYAYDIVCNGNEIGGGSIRIHRKDVQERVFKIMGISEEDAQEKFGFLLEAFK 524

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DRIV LL G  ++REV  FP +    D L  +P+ ++  Q  E G+ 
Sbjct: 525 FGAPPHGGIAFGWDRIVSLLAGVDSIREVIAFPKTGAGYDPLTQAPAPITDAQRAEAGVD 584

Query: 591 IVEN 594
               
Sbjct: 585 FEPE 588


>gi|148284104|ref|YP_001248194.1| aspartyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|166225370|sp|A5CC91|SYD_ORITB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146739543|emb|CAM79272.1| aspartyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 597

 Score =  593 bits (1529), Expect = e-167,   Method: Composition-based stats.
 Identities = 305/601 (50%), Positives = 408/601 (67%), Gaps = 11/601 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH+YRTH+CG+L ++ VG  V+LSGW++R R HGG++F+D+RDHYGI Q+V N D +  +
Sbjct: 1   MHKYRTHTCGELSLAHVGLQVKLSGWLYRRRDHGGLLFIDLRDHYGIIQLVFNDDCSAVQ 60

Query: 61  -IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
                ++ E V+ ++G V++RS ETIN NI TG +E+      + S AEELPL + GE E
Sbjct: 61  AEISKIKFETVITVEGAVVARSNETINKNISTGDVEVVVSSYVVESFAEELPLQINGEYE 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            PE  R KYRFLDLR   LH+NIV R+++I  +R +M++  FIE  TPILTASSPEGARD
Sbjct: 121 APEETRLKYRFLDLRGARLHQNIVLRSKVIQELRNQMLSNGFIEFQTPILTASSPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQ+KQL+M SGFD+YFQIAPCFRDED R+DR PGEFYQLD+
Sbjct: 181 FLVPSRLHPGKFYALPQAPQQFKQLIMMSGFDKYFQIAPCFRDEDARADRSPGEFYQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FV Q+D+   +E VL   F++FSN +  +  F RI YD+++ RYG+DKPDLRNPI +
Sbjct: 241 EMAFVTQEDVFGLVEPVLYNTFKKFSNYSITNIPFPRITYDESMLRYGSDKPDLRNPIQI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VT+ F  SEF      ++          P       R+F D+M E+A+  G  GLAYI
Sbjct: 301 SDVTDIFQCSEFTTLKDSINCGAVVRAIPAPMSANK-PRSFFDKMIEYAKHLGASGLAYI 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  D        G +AK  +      I+  +  QDGD+ FFI          AA  R  
Sbjct: 360 QFTND-----GVKGSIAKFFDEALLARIKKLVKCQDGDAIFFICDKENDATKVAAKIRAK 414

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----NDLL 475
           + +EL II  +C++FCW++DFPFY+ + E  KI F+HNPF+MPQGG+E+        DLL
Sbjct: 415 VGEELNIIKTDCYKFCWVIDFPFYQLDSEINKITFSHNPFSMPQGGIEAFNKAKTVEDLL 474

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           SIKAFQYD+VCNG E++SG IRNH  ++M +AF+ VG SK+ V+ +FG + RAF  G PP
Sbjct: 475 SIKAFQYDIVCNGVELSSGAIRNHKPDLMYKAFAIVGYSKDEVDKQFGAMIRAFCYGAPP 534

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA GIDRI+MLL  + N+REV  FPM+Q   DLLMG P+ V+ +QL EL L+++   
Sbjct: 535 HGGIAPGIDRILMLLTNSVNIREVIAFPMNQQAEDLLMGCPAAVTDKQLHELQLKLISKE 594

Query: 596 K 596
           +
Sbjct: 595 R 595


>gi|255013259|ref|ZP_05285385.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 585

 Score =  593 bits (1529), Expect = e-167,   Method: Composition-based stats.
 Identities = 227/598 (37%), Positives = 338/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFE 60
            YRT +CGDL ++D G  V L+GWV + R  GG+ F+DIRD YGITQ+V N   D+A  E
Sbjct: 1   MYRTRTCGDLRLADEGLVVTLAGWVQKTRKMGGMTFVDIRDRYGITQLVFNQEVDAALCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  RS++  NA+I TG IEL   ++ +L+ A   P  +  E + 
Sbjct: 61  KANKLGREFVIQVTGTVRERSSK--NAHIPTGDIELIVSELNVLNTALTPPFTIEEETDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + KN+  R R+   +R  +  + F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRACVRKNLELRHRMAFEVRRYLDEQGFLEVETPVLVNSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+LN  E + + +F+         + F+R+ + DA+++YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDVLNMFEGMAKHLFKVIRGVEFKES-FMRMTWQDAMKQYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAY 358
            + +      F VF     +                 R   D + E+ +    G  GL Y
Sbjct: 297 ELMDIMKGHGFSVFDNAAYIGG-----ICAEGAASYTRKQLDALTEFVKRPQVGAKGLVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  GNV     V K  +    + ++     + GD    ++GD + K      + R
Sbjct: 352 A--RVEADGNVK--SSVDKFYSQEVLQEMKNAFGAKPGDLILILSGDDVMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + + F   W++DFP +EWNE++++    H+PFT P      L   D  ++
Sbjct: 408 LEMGNQLGLRDKDKFVCLWVIDFPLFEWNEDDQRFYAMHHPFTSPNPDDIPLLDTDPGAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H S++  + F  +G ++E  + +FG L  AF+ G PPHG
Sbjct: 468 RANAYDMVINGVEVGGGSIRIHDSQLQDKMFKLLGFTEERAQEQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +P  +   QL EL L +    
Sbjct: 528 GLAYGLDRFVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGVLDPAQLDELNLIVDIKK 585


>gi|71904484|ref|YP_281287.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|71803579|gb|AAX72932.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 599

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 226/597 (37%), Positives = 347/597 (58%), Gaps = 17/597 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +   R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    +
Sbjct: 16  LFMKRSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSD 75

Query: 61  I---AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           +   A+ +RSE+V+ ++G V +R     N  + TG +EL    + IL+ A+  P  +  +
Sbjct: 76  VMATAERLRSEYVIEVEGFVEARQ--QANDKLATGMVELKVSALTILNTAKTTPFEIKDD 133

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            E  +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGA
Sbjct: 134 VEVSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGA 193

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+
Sbjct: 194 RDYLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQV 252

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+E SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +
Sbjct: 253 DLETSFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEM 311

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           ++ ++T      +F+VFS+     P  +   +       +R   D++ E+A+  G  GLA
Sbjct: 312 LLQDLTVTVNGIDFKVFSEA----PAVKAIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA 367

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++       G +A  GPVAK L  + TE +  +L + + D   F+A       +     R
Sbjct: 368 WVKVT---DGQLA--GPVAKFLIAIETE-LSSQLKLAENDLVLFVADTLEVANNTLGALR 421

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           N IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  +
Sbjct: 422 NRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKV 481

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHG
Sbjct: 482 RAIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHG 541

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I  +
Sbjct: 542 GLAIGLDRFVMLLAGKGNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQIESH 598


>gi|50915178|ref|YP_061150.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|50904252|gb|AAT87967.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 599

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 225/597 (37%), Positives = 346/597 (57%), Gaps = 17/597 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +   R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    +
Sbjct: 16  LFMKRSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSD 75

Query: 61  I---AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           +   A+ +RSE+V+ ++G V +R     N  + TG +EL    + IL+ A+  P  +  +
Sbjct: 76  VMATAERLRSEYVIEVEGFVEARQ--QANDKLATGMVELKVSALTILNTAKTTPFEIKDD 133

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            E  +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGA
Sbjct: 134 VEVSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGA 193

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+
Sbjct: 194 RDYLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQV 252

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+E SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +
Sbjct: 253 DLETSFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEM 311

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           ++ ++T      +F+VFS+     P  +   +       +R   D++ E+A+  G  GLA
Sbjct: 312 LLQDLTVTVKGIDFKVFSEA----PAVKAIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA 367

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++       G +A  GPVAK L  + TE +  +L + + D   F+A       +     R
Sbjct: 368 WVKVT---DGQLA--GPVAKFLTAIETE-LSSQLKLAENDLVLFVADTLEVANNTLGALR 421

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           N IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  +
Sbjct: 422 NRIARDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKV 481

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHG
Sbjct: 482 RAIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHG 541

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G+DR VMLL    N+REV  FP +    D +  +PS VS  QL EL L+I  +
Sbjct: 542 GLAIGLDRFVMLLAEEDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQIESH 598


>gi|282895988|ref|ZP_06304019.1| Aspartyl-tRNA synthetase [Raphidiopsis brookii D9]
 gi|281199098|gb|EFA73968.1| Aspartyl-tRNA synthetase [Raphidiopsis brookii D9]
          Length = 598

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 236/602 (39%), Positives = 353/602 (58%), Gaps = 17/602 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+     +G  V L GWV R R HGG+IFLD+RD  GI QVV++P      ++IA
Sbjct: 2   RTHYCGEPRKHHIGENVILYGWVDRHRDHGGVIFLDLRDRSGIVQVVSDPQRTPESYQIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP- 121
            S+R+E+V+ I G V  R AE++N  ++TG++E+ A  IE+L+   +         E   
Sbjct: 62  NSIRNEYVVKIIGRVTERPAESLNPRLLTGEVEVYADHIELLNSVSKNLPFQVSSGETEN 121

Query: 122 --ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178
             E +R KYR+LDLRR+ + KNI  R +++ +MR  +  +  FIE  TP+LT S+PEGAR
Sbjct: 122 VREDVRLKYRYLDLRRERMAKNIQLRHQVVKAMRRYLEDQEGFIEIETPVLTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+++PSRVN+G ++ALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYILPSRVNEGQWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ +++I+   E ++  +F+   + + + + F R+ Y DA+ +YGTDKPD R  + 
Sbjct: 241 MEMSFMSEEEIIQLNEKLVCHIFKTVQDID-LPHPFPRLRYQDAMHKYGTDKPDTRYGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V++      F+VF  +++     ++  IP      +         +   A   G  G
Sbjct: 300 LVDVSDVVQDCGFKVFRDVVAGGGMVKILPIPHGNDAISNVRIKPGGDIFREAAEAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI  R+ ++G +  +G +  +L     + I  R   ++G    F A D          
Sbjct: 360 LAYI--RVRDNGEIDTIGAIKDNLTTAQKQEILTRTAAKEGHLLLFAAADASVVNKTLDR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  IA+E  +I      F WI +FP +EWN  EK+++  H+PFT P          DL 
Sbjct: 418 LRQFIAREFNLIPPGKMNFLWITEFPMFEWNANEKRLEALHHPFTAPHPDDLH----DLK 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + +A  YDLV NGFE+  G +R +  E+  + F  +G+S E   N+FG L  AF+ G PP
Sbjct: 474 TARAQAYDLVLNGFEVGGGSLRIYQREIQARVFETIGLSSEEARNKFGFLLEAFEYGTPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VMLL   +++R+V  FP +Q    LL  +P+ V ++QL+EL +     P
Sbjct: 534 HGGIAYGVDRLVMLLAQEESIRDVIAFPKTQQARCLLTDAPAMVELKQLKELHVASTTKP 593

Query: 596 KK 597
           K+
Sbjct: 594 KE 595


>gi|119964210|ref|YP_948028.1| aspartyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119951069|gb|ABM09980.1| aspartyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 626

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 227/612 (37%), Positives = 329/612 (53%), Gaps = 27/612 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    +G  V L+GWV R R HGG+ F+D+RD  G+ QVV   +    E+   
Sbjct: 32  RTHDLGSLRSEHIGQTVTLAGWVGRRRDHGGVAFVDLRDASGVAQVVVREE----EVFHG 87

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL + G V  R     N  + TG+IE+ A K+ IL+ +E LP  +    E  E  
Sbjct: 88  LRNEYVLQVTGTVNRRPEGNENPALATGEIEVMADKVVILNTSEPLPFQIDEHVEVGEEA 147

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R K+R+LDLRR    +N+  R+      R  +    ++E  TP LT S+PEGARDF+VP+
Sbjct: 148 RLKHRYLDLRRPGPARNMRLRSEANRVARELLHQRGYVEIETPTLTRSTPEGARDFVVPA 207

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLL   GF++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 208 RLAPGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 266

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +QDD++   E +++ +++       +     R+ Y DA+ +YG+DKPDLR  + +  +TE
Sbjct: 267 DQDDVIELGEAIVKALWQLI--DVEIPTPIRRMTYLDAMAKYGSDKPDLRFGVELTELTE 324

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + F VF         Y    +   G    R   D   E+A+ +G  GLAY+ ++  
Sbjct: 325 FFKDTNFGVFKAP------YVGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVLFK-- 376

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +A  GPVAK+L     E +   +  + GD  FF AG+     +    AR  I    
Sbjct: 377 EDGELA--GPVAKNLTDAEREGLADAVGAKPGDCIFFAAGEKSAARALLGAARVEIGHRT 434

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
           G+I+   + F WI+D P +E                +    H+ FT P+         D 
Sbjct: 435 GLIDPKDWAFVWIVDAPMFEPAAAAVASGDVAVGAGQWTAVHHAFTSPKPEFLDTFDKDP 494

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  ++ YD+VCNG EI  G IR H  EV  + F  +G+ KE  E +FG L   F+ G P
Sbjct: 495 ESALSYAYDIVCNGNEIGGGSIRIHEREVQERVFQLMGLDKEDAETKFGFLLEGFKYGAP 554

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G DR+V LL G +++R+V  FP S N  D L  +P+ ++ +Q +E G+     
Sbjct: 555 PHGGMALGWDRVVALLAGVESIRDVIAFPKSGNGYDPLTAAPAPITPQQRKEAGVDFKPE 614

Query: 595 PKKILKISVTTI 606
            K   K    + 
Sbjct: 615 SKPAAKPDTKSE 626


>gi|94995326|ref|YP_603424.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|94548834|gb|ABF38880.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 599

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 226/597 (37%), Positives = 347/597 (58%), Gaps = 17/597 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +   R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    +
Sbjct: 16  LFMKRSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSD 75

Query: 61  I---AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           +   A+ +RSE+V+ ++G V +R     N  + TG +EL    + IL+ A+  P  +  +
Sbjct: 76  VMATAERLRSEYVIEVEGFVEARQ--QANDKLATGMVELKVSALTILNTAKTTPFEIKDD 133

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            E  +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGA
Sbjct: 134 VEVSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGA 193

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+
Sbjct: 194 RDYLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQV 252

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+E SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +
Sbjct: 253 DLETSFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDIAMNSYGSDKPDTRFEM 311

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           ++ ++T      +F+VFS+     P  +   +       +R   D++ E+A+  G  GLA
Sbjct: 312 LLQDLTVTVKGIDFKVFSEA----PAVKAIVVKGNADRYSRKDIDKLTEFAKQFGAKGLA 367

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++       G +A  GPVAK L  + TE +  +L + + D   F+A       +     R
Sbjct: 368 WVKVT---DGQLA--GPVAKFLIAIETE-LSSQLKLAENDLVLFVADTLEVANNTLGALR 421

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           N IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          DL  +
Sbjct: 422 NRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDLAKV 481

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHG
Sbjct: 482 RAIAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHG 541

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+A G+DR VMLL G  N+REV  FP +    D +  +PS VS  QL EL L+I  +
Sbjct: 542 GLAIGLDRFVMLLAGKGNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQIESH 598


>gi|330997882|ref|ZP_08321716.1| aspartate--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329569486|gb|EGG51256.1| aspartate--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 586

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 219/595 (36%), Positives = 336/595 (56%), Gaps = 19/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
            +RT++CG+L ++D G  V L+GWV RVR  GG+ F+D+RD YGITQ+V N +   A   
Sbjct: 1   MFRTNTCGELRLADAGKTVTLAGWVQRVRKMGGMTFVDLRDRYGITQLVFNEEVNDALCA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E V+ I G V  R  E+ N N+ TG+IE+   ++ +L+ +   P  +    + 
Sbjct: 61  RANKLGREDVIQIKGEVNER--ESKNKNLPTGEIEIIVSELTVLNASVTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  + KN+  R ++   +R  + ++ F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRACVRKNLELRHQMTMEVRRYLDSKGFLEIETPMLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +G DRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D++   E + + +F        ++  F R+ + +A+R YG+DKPD R  +   
Sbjct: 238 MSFVEQEDVIALFEGMAKHLFRTIRGIE-LTEPFPRMPWSEAMRLYGSDKPDTRFGMEFV 296

Query: 301 NVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + +    + EF VF+    +                 R   D++ ++ +    G  GL 
Sbjct: 297 ELMDVLKGTGEFSVFNDASYIGG-----ICVPGCASYTRKQLDQLTDFVKRSQIGAKGLV 351

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADA 416
           Y   R+ E G+V     V K         ++  +    GD    ++G D +K      + 
Sbjct: 352 YA--RVQEDGSVK--SSVDKFYTQEVLLRLKETMKAVPGDLILIMSGEDAMKTRKQLCEL 407

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L  ++  +
Sbjct: 408 RLEMGTRLGLRDKNKFSLLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDSNPAA 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD+VCNG E+  G IR H  E+  + F  +G ++E  + +FG L  AF+ G PPH
Sbjct: 468 VRADAYDMVCNGVEVGGGSIRIHDPELQDKMFKILGFTEERAQEQFGFLMNAFKYGAPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GG+A G+DR V L  G  ++R+   FP + +  D+++ +PS +  +QL EL L +
Sbjct: 528 GGLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSYIDQKQLDELSLAL 582


>gi|124024643|ref|YP_001018950.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|166225374|sp|A2CDX5|SYD_PROM3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123964929|gb|ABM79685.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 606

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 227/606 (37%), Positives = 342/606 (56%), Gaps = 28/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R++SCG+L    + S V+L GWV R R HGG+IF+D+RD  G  Q+  +PD     F  A
Sbjct: 2   RSNSCGELRSKHIASNVQLCGWVDRCRDHGGVIFIDLRDRSGTIQITVDPDQGAELFASA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGERE 119
           +S+R+E VL I GLV  R A+ IN+ + TG+IE+ A  +E+L+         + +  E  
Sbjct: 62  ESLRNETVLQITGLVRPRPADAINSKLSTGEIEVLADGLEVLNPVTGNLPFTVSIHDEEP 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R LDLRR+ + +N+  R   I + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 VKEELRLRHRHLDLRRERMSRNLQLRHTTIKTARRFLEDEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YLVPSRVCSGEWFALPQSPQLFKQLLMVGGLERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q+ IL   E ++  +++     + +   F R+ + +A+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQEQILKLNERLIATIWKAVKGID-LPLPFPRLTWHEAMDRYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC----DRMNEWARSQGQPG 355
           ++V++      F+VFS  ++     +   +P      +        D  NE A+  G  G
Sbjct: 300 NDVSDILKDMGFKVFSGAIAAGGSVKCITVPNGNDLISNVRIKPGGDIFNE-AQKAGAGG 358

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LA+I  R+ +S  +  +G +  +LN     A+  +   + GD   F AG      S    
Sbjct: 359 LAFI--RVRDSDEIDSIGAIKDNLNSKQKTALLKQTGAKAGDLILFGAGKTATVNSALDR 416

Query: 416 ARNHIAQELGIINCNC----FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            R  + +ELG+I  +     ++F W++DFP +E N EE +++  H+PF  P        G
Sbjct: 417 VRQFLGRELGLIPTDQDNKLWQFLWVVDFPMFELNAEENRLEALHHPFCAPNKDD---LG 473

Query: 472 NDLLS-------IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
           ND  +        +A  YDLV NG E+  G +R H +E+  Q    +G+  E    +FG 
Sbjct: 474 NDPDAWMERLPQARAQAYDLVLNGLELGGGSLRIHNAELQRQVLQTIGLPLEEANQQFGF 533

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  A + G PPHGG+A G+DRIVMLL G  ++R+   FP +Q    L+  +P+ VS  QL
Sbjct: 534 LIDALEMGAPPHGGLAFGMDRIVMLLTGEDSIRDTIAFPKTQQARCLMTQAPAGVSNHQL 593

Query: 585 RELGLR 590
            EL + 
Sbjct: 594 EELHVE 599


>gi|284925900|gb|ADC28252.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 583

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 241/596 (40%), Positives = 344/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+      EIA
Sbjct: 2   RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            + R+E+VL  +G +  R    IN  + TG+IE+   K+ I + +  +P     +    E
Sbjct: 62  SNARNEFVLIAEGTIRPRGEGLINPKLKTGEIEVVVSKLTIENES-AVPPFAIADESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++N  E  L+ +F+       +   F ++ Y DA+  YG+DKPDLR  +   +V
Sbjct: 240 FCEQKDVINVAETFLKDIFKACGKE--IQTPFRQMQYKDAMENYGSDKPDLRFDLKFIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R  +
Sbjct: 358 VKKD-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ N  EF W++DFP +E N++       H+PFTMP+   E     DL  I + 
Sbjct: 413 ANELKLIDPNALEFLWVVDFPMFEQNDD-GSYSAMHHPFTMPKNIDE----TDLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 528 IGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|88597107|ref|ZP_01100343.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|88190796|gb|EAQ94769.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
          Length = 583

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 239/596 (40%), Positives = 343/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+      EIA
Sbjct: 2   RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            + R+E+VL  +G +  R    +N  + TG+IE+   K+ I + +  +P     +    E
Sbjct: 62  SNARNEFVLITEGTIRPRGEGLVNPKLKTGEIEVVVSKLTIENES-AVPPFAIADESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++   E  L+ +F+       +   F ++ Y DA+  YG+DKPDLR  +   +V
Sbjct: 240 FCEQKDVIKVAETFLKDIFKACGKE--IQTPFRQMQYKDAMENYGSDKPDLRFDLKFIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R  +
Sbjct: 358 VKKD-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ N  EF W++DFP +E N++       H+PFTMP+   E     DL  I + 
Sbjct: 413 ANELKLIDPNALEFLWVVDFPMFEQNDD-GSYSAMHHPFTMPKNIDE----TDLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 528 IGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|218562290|ref|YP_002344069.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|24212426|sp|Q9PHM7|SYD_CAMJE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|112359996|emb|CAL34785.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
          Length = 583

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 239/596 (40%), Positives = 343/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+      EIA
Sbjct: 2   RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            + R+E+VL  +G +  R    +N  + TG+IE+   K+ I + +  +P     +    E
Sbjct: 62  SNARNEFVLITEGTIRPRGEGLVNPKLKTGEIEVVVSKLTIENES-AVPPFAIADESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++   E  L+ +F+       +   F ++ Y DA+  YG+DKPDLR  +   +V
Sbjct: 240 FCEQKDVIKVAETFLKDIFKACGKE--IQTPFRQMQYKDAMENYGSDKPDLRFDLKFIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R  +
Sbjct: 358 VKKD-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ N  EF W++DFP +E N++       H+PFTMP+   E     DL  I + 
Sbjct: 413 ANELKLIDPNALEFLWVVDFPMFEQNDD-GSYSAMHHPFTMPKNIDE----TDLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 528 IGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|327314617|ref|YP_004330054.1| aspartate--tRNA ligase [Prevotella denticola F0289]
 gi|326945678|gb|AEA21563.1| aspartate--tRNA ligase [Prevotella denticola F0289]
          Length = 585

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 216/595 (36%), Positives = 337/595 (56%), Gaps = 20/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT++CG+L +SD G  V L+GWV R R  GG+ FLD+RD YGITQ+V N   D+A   
Sbjct: 1   MYRTNTCGELRISDAGKEVTLAGWVQRSRKMGGMTFLDLRDRYGITQLVFNEADDAALCG 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + + G+V  R   + N+ I TG IE+ A+++ +LS +   P  +    + 
Sbjct: 61  EANKLGREYCIQVKGIVSERQ--SRNSKIPTGDIEIIAKELNVLSPSLTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR+ + KN+  R R+   +R  + A+ F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRREGVRKNLELRHRMTILIRNFLDAQQFMEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++N  E + R +F E            ++ + +A++R+G+DKPDLR  +   
Sbjct: 238 MSFVDQEDVINLFEEMARHLFREIRGVELPKL--EQMTWHEAMKRFGSDKPDLRFGMEFV 295

Query: 301 NV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + ++      F VF +   +        +       +R   + + ++ +    G  GL 
Sbjct: 296 ELMSDLKGTGSFSVFDEAAYIGG-----IVVPGCADYSRKQLNELTDFVKRPQIGAHGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           +I +  D          + K       + ++     +DGD    ++GD   K        
Sbjct: 351 FIKYNADG----TVKSSIDKFYTPEQLQKVKETTGARDGDLVLILSGDNANKTRIQLCSL 406

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + N F+  W++DFP +EW++EE+++   H+PFTMP      L       
Sbjct: 407 RLEMGSRLGLRDKNVFKCLWVIDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPEQ 466

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G +R H +++  + F  +G + E  E +FG L  AF+ G PPH
Sbjct: 467 VRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAPPH 526

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR V +L G  ++R+   FP + +  D+++ +PS +  +QL EL +++
Sbjct: 527 AGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQKQLDELEIKL 581


>gi|294630423|ref|ZP_06708983.1| aspartyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292833756|gb|EFF92105.1| aspartyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 587

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 293/597 (49%), Positives = 402/597 (67%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E V+ +DG V+SR  E +N  + TG+IE+   ++E+L  A  LP  +  E   
Sbjct: 61  ALDKLSKETVVRVDGKVVSRGTENVNTELPTGEIEIEVGEVEVLGAAAPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+++R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLHPGRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF  G  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFRPIEQLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F  SEF+ F+             +PA      R F D++ ++A SQG  GLA++ 
Sbjct: 301 DITDVFEGSEFKAFA-----GKHVRALPVPAVQDQ-PRKFFDQLGDYAVSQGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G++   GP+AK L   N   +  RL +  G + FF AG+  +        R   
Sbjct: 354 -RVGEDGSLT--GPIAKFLTEENVAELTKRLSLAAGHAVFFGAGEFDEVSKIMGAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G    + F FCWI+DFP YE +EE  KIDF+HNPF+MPQGG+++L+  D L I A+
Sbjct: 411 AKRAGQFEQDVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLQALETQDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  ++ML+AF   G   E VE  F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGVELSSGAIRNHEPDIMLKAFEIAGYDAETVEREFAGMLRAFRFGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +L+EL L + +   K
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELEPARLKELHLTVNKPQPK 587


>gi|33241301|ref|NP_876243.1| aspartyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|46577199|sp|Q7V9I1|SYD_PROMA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33238831|gb|AAQ00896.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 605

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 220/600 (36%), Positives = 346/600 (57%), Gaps = 19/600 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CG+L    + S V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  S  F +A
Sbjct: 2   RSNYCGELRKKHINSNVQLCGWVDRRRDHGGVIFIDLRDRTGTIQITIDPDQGSELFTVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV---AEELPLPVFGERE 119
           +++R+E V+ I G + +R +E+ N  + TG+IE+ A  +E+L+         + V  +  
Sbjct: 62  ENLRNETVVQISGTIRARPSESCNQKLKTGEIEVLANHLEVLNQIQGNLPFSISVHDDEP 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLR+D + KN+  R  ++ + R  +  ENF+E  TPILT S+PEGARD
Sbjct: 122 IKEELRLRHRYLDLRKDRMTKNLRLRHEVLKTARNFLEQENFLEVETPILTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV +G ++ALPQ+PQ +KQLLM  G +RY+QIA CFRDED RSDR P EF QLD+
Sbjct: 182 YLVPSRVCEGDWFALPQSPQLFKQLLMVGGIERYYQIARCFRDEDLRSDRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ Q++IL   E ++  +++     + + + F R+ + +++ R+GTD+PD R  + +
Sbjct: 241 EMSFMSQEEILGLTEKLISSIWKSVKGVD-LVHPFPRLTWQESMDRFGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
            NV++      F+VFS  +      +   I       +         +   A   G  GL
Sbjct: 300 KNVSQILKGIGFKVFSGAIDAGGSVKCITITGGNQLISNVRIKPGGDIFSEAEKAGAKGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  R+  +G +  +G +  +LNI   E +  + +  +GD   F AGD        A  
Sbjct: 360 AFI--RVRGNGEIDTIGAIKDNLNIAQKEELLKQTNANEGDLILFAAGDTTTVNKTLARL 417

Query: 417 RNHIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES---L 469
           R  +A++L +I    N   + F W++DFP +E+N +E +++  H+PF  P         L
Sbjct: 418 RQFLAKDLDLIPFKLNNEQWNFLWVVDFPMFEFNSDENRLEALHHPFCAPNQSDLGQRRL 477

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              +L + +A  YDLV NG E+  G +R H  ++ L     +G+  +  +  FG L  A 
Sbjct: 478 WETNLPTARAQAYDLVLNGLELGGGSLRIHNPDLQLTVLKTIGLPLQEAKKEFGFLLEAL 537

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGG+A G+DRIVMLL G +++R+   FP +Q    LL  +P+ VS +QL+EL +
Sbjct: 538 EMGAPPHGGLAFGLDRIVMLLAGEESIRDTIAFPKTQQAKCLLTEAPAEVSKKQLKELHI 597


>gi|27262452|gb|AAN87507.1| Aspartyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 559

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 226/565 (40%), Positives = 339/565 (60%), Gaps = 12/565 (2%)

Query: 39  LDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIEL 96
           +D+RD  G+ QVV +P+     F  A+SVR+E+VL + G V +R   T+NAN+ TG++E+
Sbjct: 1   MDLRDRSGLVQVVFSPEVGQEAFTKAESVRNEYVLAVTGDVKARPEGTVNANLPTGEVEV 60

Query: 97  SAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM 156
            A+++ IL+ A+  P  +  + +  E +R KYR+LDLRR  + +N++ R +   +MR  +
Sbjct: 61  YARQLLILNAAKTPPFYIEDDVDVDEMVRLKYRYLDLRRPEMQRNLIVRHKTAKAMRDFL 120

Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216
               F+E  TP+L  S+PEGARDFLVPSRV+ G F+ALPQ+PQ YKQ+LM SG +RYFQI
Sbjct: 121 DRNGFLEIETPMLINSTPEGARDFLVPSRVHPGEFFALPQSPQIYKQILMVSGMERYFQI 180

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
             CFRDED R+DR P EF QLD+EMSFVE DDIL+ ME ++  +F E       ++ F R
Sbjct: 181 VRCFRDEDLRADRQP-EFTQLDIEMSFVEMDDILSLMEKMVSFIFREALGKEIPAS-FRR 238

Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG- 335
           I Y +A+ RYG+DKPDLR  + + +VT+     EF+VF+ +     G ++  I AKG   
Sbjct: 239 IPYSEAMGRYGSDKPDLRFGLELTDVTDVVKDVEFKVFAAVA--KGGGQIKGINAKGCAH 296

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
            +R   D + +     G  GLAYI              P++K         +   +  + 
Sbjct: 297 FSRKEIDELTKLTAIYGAKGLAYIQMT-----PEGPKSPISKFFTDEQFADLLQTMQAET 351

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
           GD   F+A  P    +   + R  + + L +I+    EF W++DFP  E++ EEK+    
Sbjct: 352 GDLLMFVADKPSVVAAALGNLRLELGRRLNLIDPEKLEFAWVVDFPLLEYDAEEKRYVAI 411

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           H+PFT P+    SL  +D   ++A  YDLV NG E+  G +R +  ++  + FS +G S+
Sbjct: 412 HHPFTSPKDEDLSLLDSDPAKVRAKAYDLVLNGVELGGGSLRIYHRDIQEKMFSLLGFSQ 471

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
           E    +FG L  AF+ G PPHGGIA G+DR++ML++G   +R+V  FP +Q+  DL++G+
Sbjct: 472 EEATQKFGYLLEAFEYGTPPHGGIAFGLDRMIMLMMGRDTIRDVIAFPKTQSSSDLMVGA 531

Query: 576 PSTVSVEQLRELGLRIVENPKKILK 600
           P+TVS +QL+EL +++    K   K
Sbjct: 532 PNTVSPKQLKELHIKLDLPAKLTGK 556


>gi|42520288|ref|NP_966203.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|59798566|sp|Q73HX6|SYD_WOLPM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|42410026|gb|AAS14137.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 600

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 290/606 (47%), Positives = 399/606 (65%), Gaps = 19/606 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+ Y+TH+C +L  +DV   V LSGW++R R HG +IF+D+RD YGITQ+V N D   F+
Sbjct: 1   MNCYKTHTCEELRKNDVEKEVTLSGWLYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF----- 115
              +++ E V+ + G+V +R+ +T+N++I TG+IE+    + + S  E            
Sbjct: 61  EISNLKLESVITVTGIVEARTEDTVNSSISTGEIEVIVNNLRVESEVEFHFDEEIAKEER 120

Query: 116 -------GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                  GE+EYPE++RFKYRFLDLRR+ +  NI+ R++II  +R  MI   F+E  TPI
Sbjct: 121 SILVSITGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIIAELRKLMIERGFLEIQTPI 180

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D
Sbjct: 181 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARAD 240

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           R PGEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F RI Y +A+ +YG+
Sbjct: 241 RSPGEFYQLDLEMSFVTQEDIFQIIESTLYRVFAKFS-RKSVDKDFPRITYKEAMLKYGS 299

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           DKPDLRNP+++ +VTE F  S F +F   +           P K     R+F D+  E A
Sbjct: 300 DKPDLRNPLLISDVTEIFRDSGFNIFKSNIERGMVVRAIPAP-KTAEEPRSFFDKKIEHA 358

Query: 349 -RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407
            +  G  GL YI +      +    GP+AK L+      IR   +++ GDS FF +    
Sbjct: 359 QKEFGAKGLGYITF----DKDGTAKGPIAKFLDENRLNHIREATNIEPGDSVFFASDKEN 414

Query: 408 KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
           +  + A   R  +  EL +I+ N F FCWI+DFP++ ++++ KKIDF HNPF+MP GG++
Sbjct: 415 EAANIAGKVRTLLGSELSLIDDNIFRFCWIIDFPYFVYDDKSKKIDFFHNPFSMPHGGLK 474

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
            L+  + L I A+QYDLVCNG E++SG IRN+  ++M +AF+  G S+  V+ RFG L R
Sbjct: 475 DLEDKNPLDILAYQYDLVCNGIELSSGAIRNNKLDIMYKAFAIAGYSRGEVDTRFGALVR 534

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G+PPHGGIA G+DRIVMLL    N+REV  FPM+Q   D+LMG+PS V  + LREL
Sbjct: 535 AFRFGVPPHGGIAPGVDRIVMLLADEPNIREVICFPMNQQGEDVLMGAPSKVEDKHLREL 594

Query: 588 GLRIVE 593
            L+++E
Sbjct: 595 SLKVIE 600


>gi|126662943|ref|ZP_01733941.1| aspartate--tRNA ligase [Flavobacteria bacterium BAL38]
 gi|126624601|gb|EAZ95291.1| aspartate--tRNA ligase [Flavobacteria bacterium BAL38]
          Length = 581

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 219/595 (36%), Positives = 335/595 (56%), Gaps = 19/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACF 59
            YR+H+CG+L  S + + V L+GWV + R  G +I++D+RD YGITQ++ +    D A F
Sbjct: 1   MYRSHNCGELNASHINTEVTLAGWVQKSRDKGFMIWVDLRDRYGITQLIFDEKRTDKAVF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E AKS+  E+V+ I G V+ R  E+ NAN+ TG IE+   ++ +L+ A+  P  +  E +
Sbjct: 61  ERAKSLGREFVIQIKGTVIER--ESKNANMATGDIEILVTELTVLNEAQLPPFTIEDETD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR KYR+LD+RR+ +  N++ R ++   +R  +  + F +  TP L  S+PEGARD
Sbjct: 119 GGEDIRMKYRYLDIRRNPVKNNLLFRHKVSMEVRKYLSDQGFCDVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DILN  E + R + +E          F RI YD A++ YG DKPD+R  +  
Sbjct: 238 EMAFVEQEDILNMFEGLTRHLLKEIKGVEVEK--FPRITYDYAMKTYGNDKPDIRFEMKF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             +     H +F VF+    +                 R   D + +W +    G  G+ 
Sbjct: 296 GELNAVAQHKDFPVFNSAELLVG-----IAAPGCASYTRKEIDALIDWVKRPQVGASGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+    D          V K  +  + +      + + GD    ++G+  K  +  +  R
Sbjct: 351 YVKCEEDG----TFKSSVDKFYDQEDLKQWAEITNAKPGDLILILSGNANKVRTQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A  LG+   + F   W++DFP  EW+EE  +    H+PFT P+    +L   +   +
Sbjct: 407 MEVATRLGLRKSDEFAPLWVVDFPLLEWDEESGRYHAMHHPFTSPKPEDMALIETEPGKV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG EI  G IR H  ++  + F  +G SKE  + +FG L  AF+ G PPHG
Sbjct: 467 RANAYDMVLNGNEIGGGSIRIHDRDLQSRMFDLLGFSKEEAQAQFGFLMSAFEFGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+A G+DR+V +L G + +R+   FP + +  D+++ +PS +   QL+EL +++ 
Sbjct: 527 GLAFGLDRLVSILGGQETIRDFIAFPKNNSGRDVMIDAPSKIDETQLQELHIKLR 581


>gi|297623999|ref|YP_003705433.1| aspartyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165179|gb|ADI14890.1| aspartyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 610

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 225/588 (38%), Positives = 336/588 (57%), Gaps = 12/588 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           CG L  + VG  V L GWV+R R  GG++F D+RD  G+ QVV  P S  F  A+ +RSE
Sbjct: 16  CGTLREAHVGQDVTLKGWVNRRRDLGGLVFFDLRDRSGLVQVVVEPGSGAFGTAERLRSE 75

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF---GEREYPESIR 125
           +V+ + G V +R     +  + TG +E+ A+ + +LS A+  P  V       E  E +R
Sbjct: 76  FVVEVTGRVRARPEGQRSDRLQTGAVEVVARGVTVLSEAKTPPFLVDGSVDAGEVSEELR 135

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            KYR+LDLRR    + ++ R ++I ++   + AE F++  TP+LT S+PEGARDF+VPSR
Sbjct: 136 LKYRYLDLRRPEALRPLLVRHKVIKAIWDFLDAEGFVQVETPLLTLSTPEGARDFVVPSR 195

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              GSFYALPQ+PQ +KQLLM +G +RYFQIA CFRDED R+DR P +F QLD+EMSFV 
Sbjct: 196 TQPGSFYALPQSPQLFKQLLMMAGVERYFQIARCFRDEDLRADRQP-DFTQLDLEMSFVT 254

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           QD++L+  E ++R V +     + ++  F R+ Y+DA+ R+G+DKPD+R  + + +++E 
Sbjct: 255 QDELLDLNERLMRAVAKAALGID-LTLPFTRLTYEDAMNRFGSDKPDVRFALELQDLSET 313

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           F  ++FR F  +L      +   + A      +R     +   A++ G  G+A++    D
Sbjct: 314 FAETDFRGFRGVLEAGGRVKALPLTAEHAAELSRKRLGELEAHAKTHGAKGMAWLRREGD 373

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
                   GP+AK L+   T  +      + GD    +A      C      R  +  EL
Sbjct: 374 -----GFAGPIAKFLSAAETAELAAHA-PETGDLLLIVADAWRVACEALGAVRARLGHEL 427

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G+I    + F W++DFP  E ++E     + H+PFT P+     L   D   ++A+ YDL
Sbjct: 428 GLIPGGTYRFLWVVDFPLLERDDETGGYTYMHHPFTRPREEDLPLLETDPGRVRAWAYDL 487

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NGFE+  G +R +     L+ F+ +GIS+     RFG    A   G PPHGG+A G+D
Sbjct: 488 VLNGFEVGGGSLRIYDQATQLKMFAALGISEREARERFGFFVDALAYGAPPHGGVAWGLD 547

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           R+VML  GA+++R+V  FP +Q   D L G+P+ +S  QL EL L + 
Sbjct: 548 RLVMLFAGAQSLRDVIAFPKNQRGGDPLTGAPAPLSAAQLAELSLSVT 595


>gi|229815946|ref|ZP_04446269.1| hypothetical protein COLINT_03001 [Collinsella intestinalis DSM
           13280]
 gi|229808499|gb|EEP44278.1| hypothetical protein COLINT_03001 [Collinsella intestinalis DSM
           13280]
          Length = 598

 Score =  593 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 231/594 (38%), Positives = 340/594 (57%), Gaps = 11/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSA 57
           MH   TH+CG+L  +++G  V L+GWV R R HGG+IF D+RD  GITQ+  +P   D  
Sbjct: 12  MHCMHTHTCGELRAANIGEEVTLTGWVSRRRDHGGLIFCDLRDREGITQINFDPEHSDGD 71

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F+IA+++R EW + + G+V  R  + +N  + TG+IE+      +L+ ++  P  +   
Sbjct: 72  AFKIAETMRPEWPIRVHGVVRDRGHDAVNPRLATGEIEVLVDHATVLNRSKTPPFQIEDG 131

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            E  E  R +YR+LDLRR  +   +  R+    ++R  +    F E  TP L  S+PEGA
Sbjct: 132 IETAEDTRLRYRYLDLRRPEMAARLRLRSDFTFAIRSALHDRAFTEVETPALFKSTPEGA 191

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RDF+VPSR+  GSFYALPQ+PQ  KQLLM  G +RY+Q+A CFRDED R+DR P EF Q+
Sbjct: 192 RDFVVPSRLQPGSFYALPQSPQLLKQLLMVGGVERYYQVAKCFRDEDLRADRQP-EFTQV 250

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFVEQDD++  +E+VL   F        +     R+ Y DA+  YG+DKPD R  +
Sbjct: 251 DIEMSFVEQDDVMAQLEDVLSDAFARVG--VEMPTPLRRLSYWDAMDTYGSDKPDTRYGM 308

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + ++T+ F +S F+VF+   +              G   RA  D++ + A + G  GLA
Sbjct: 309 ELVDLTDVFANSAFKVFASAATTEGHVVKAVNAKGAGAWPRAQIDKLAKVAATFGAKGLA 368

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +I +R D S N     P+ K         +R R D++ GD   F AG  L+        R
Sbjct: 369 WIAFREDGSVN----SPIVKFFTDEEMTELRRRCDVEPGDLVMFAAGPRLEANGILGGMR 424

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +H+A  L  +     EF W+++FP + W+EE ++ +  H PFT+P      L   D L +
Sbjct: 425 SHMADALN-VPREGHEFLWVVNFPLFHWDEEGQRYEAEHQPFTLPHVDELHLLDEDPLKM 483

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD V +GFE   GG+R H +E+ L+    +G S+E    +FG L  A + G PP G
Sbjct: 484 GSCTYDFVMDGFEAGGGGMRIHDAELQLKMLEFMGFSEERARAQFGFLMEALEFGAPPMG 543

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G A G+DR+ MLL G  ++R+V  FP + +  DL+  +PS VS+ QL+E+GLR+
Sbjct: 544 GFALGLDRVCMLLAGTDSIRDVMAFPKTSSGSDLMSAAPSEVSMAQLKEVGLRL 597


>gi|60681943|ref|YP_212087.1| aspartyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|81314992|sp|Q5LCK2|SYD_BACFN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|60493377|emb|CAH08163.1| aspartyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|301163382|emb|CBW22932.1| aspartyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 585

 Score =  592 bits (1527), Expect = e-167,   Method: Composition-based stats.
 Identities = 224/598 (37%), Positives = 335/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            +RTH+CG+L +SDV   V+LSGWV R R  GG+ F+D+RD YGITQ+V N   D+   E
Sbjct: 1   MFRTHTCGELRISDVNKQVKLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEIDAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ I G V  R ++  N++I TG IE+   ++ IL+ A   P  +    + 
Sbjct: 61  RANKLGREFVIQIVGTVNERFSK--NSHIPTGDIEIIVSELNILNSAITPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  +  N+  R ++   +R  +    F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRSAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D++ T E + + +F+   N   ++  F R+ + +A+R YG+DKPD+R  +   
Sbjct: 238 MSFVEQEDVITTFEGMAKHLFKVIRNIE-LTEPFPRMPWSEAMRLYGSDKPDIRFGMQFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     +              G  R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDILKGHGFSVFDNATYIGG-----ICAEGAAGYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  G V     V K       + ++     + GD    ++GD   K      + R
Sbjct: 352 A--RIEADGTVK--SSVDKFYTQEVLQQLKEAFGAKPGDLILILSGDDAMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   +  ++
Sbjct: 408 LEMGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTNPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RANAYDMVINGVEVGGGSIRIHDSQLQNKMFELLGFTPERAQEQFGFLMNAFKFGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +P+ +   QL EL L +    
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLEELNLIVDIKE 585


>gi|218961818|ref|YP_001741593.1| aspartyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167730475|emb|CAO81387.1| aspartyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 593

 Score =  592 bits (1527), Expect = e-167,   Method: Composition-based stats.
 Identities = 239/592 (40%), Positives = 341/592 (57%), Gaps = 11/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RTH CG+L    +G  V + GWV++ R  GG+IF+D+RD  GI QVV  P+    F  A+
Sbjct: 10  RTHYCGNLNTEHIGQEVTVMGWVNKRRDLGGLIFIDLRDVKGILQVVIRPEKPEIFAKAE 69

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+V+ + G + +R+   IN N+ TG+IEL A++  IL+ A+ LP+         E 
Sbjct: 70  KVRNEYVIAVRGKICARTEPNINPNLPTGKIELEAEEFYILNDAQPLPVQFSEVAMAEED 129

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R  YR+LDLRR  L K I+ R RI+  +R  +  E F E  TPIL  S+PEGARD+LVP
Sbjct: 130 LRLTYRYLDLRRPKLQKIIITRHRIMQIIREFLNNEGFYEIETPILMKSTPEGARDYLVP 189

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+  G FYALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF QLD+E+SF
Sbjct: 190 SRMQPGKFYALPQSPQMFKQLLMIAGLDRYYQIARCFRDEDLRADRQP-EFTQLDIELSF 248

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V Q  I + +E +   +F+E    N +S  F  I Y +A+  YG DKPD+R  + + +++
Sbjct: 249 VSQAQIFDLIERLFAKLFQEVLGYN-LSVPFPVIPYAEAMENYGCDKPDIRFEMKLFDIS 307

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
               +S F VFS  L      +  AIP K    +R   D + E A+  G  G+A+     
Sbjct: 308 NIVKNSGFNVFSAALKNGGVVKAIAIP-KAADFSRKQQDELVELAKHLGGKGIAFAKVTE 366

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           +        G ++K L+    EAI      Q  D   F A +        A  RN +A +
Sbjct: 367 N-----GLEGGISKFLSPEEAEAIIQATQAQKNDLLAFAADNYEMVSKVLAGIRNFLAPQ 421

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIKAFQ 481
           L +I  N F FCWI DFP +  N E  K + AH+ FT+P+            +  I    
Sbjct: 422 LNLIPENSFAFCWITDFPLFTKNLETGKWEPAHHMFTLPKEEHIPYLDIPEKIGEIIGQL 481

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLVCNG E++SG IR H  ++  + F  +G S+E ++ RFG    A + G PPHGGIA 
Sbjct: 482 YDLVCNGVELSSGSIRCHRYDIQKKIFDILGFSEEELQKRFGFFLEALKYGTPPHGGIAP 541

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G+DR+VM++ GA+++R+V  FP +    DL+  +PS V  +Q ++L L+ ++
Sbjct: 542 GLDRLVMIMTGAESIRDVIAFPKTLKATDLMSQAPSEVDEQQWKDLHLQPIK 593


>gi|206891126|ref|YP_002248460.1| aspartyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|226736546|sp|B5YJP5|SYD_THEYD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|206743064|gb|ACI22121.1| aspartyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 594

 Score =  592 bits (1527), Expect = e-167,   Method: Composition-based stats.
 Identities = 239/603 (39%), Positives = 353/603 (58%), Gaps = 25/603 (4%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFE 60
            +R   C ++   ++G  + L GWV R R HGG+IF+D+RD  GI QVV +P+      +
Sbjct: 1   MFRDKYCAEVKEEEIGKEISLCGWVFRRRDHGGLIFIDLRDRTGIIQVVFSPEISIEMHQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ + G++  R   T N  +ITG +EL A+++EILS ++ LP  +    E 
Sbjct: 61  KAHGLRSEYVIAVKGILKKRPEGTENPELITGNVELWAKELEILSFSKPLPFQLDEMAEV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  + KN + R RI  ++R  + ++ F+E  TP+LT S+PEGARDF
Sbjct: 121 SELLRLKYRYLDLRRAEMQKNFLLRHRITMAVRNFLDSKGFVEVETPMLTKSTPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G+FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 181 LVPSRLNPGTFYALPQSPQLFKQILMMSGFDRYFQIVRCFRDEDLRADRQP-EFTQIDFE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+ +DI+  +E +L   F+E    +     F R+ Y++AI +YG+DKPDLR  + + 
Sbjct: 240 MSFVKPEDIIEIVEEMLFKCFKEVLEVDI-EIPFKRLTYEEAINKYGSDKPDLRFALEIQ 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPGLAYI 359
           +V+E   +S+F+VF   +      +  AI  KG    +R+  D++   A+S G  GLA+I
Sbjct: 299 DVSELVKNSQFKVFLDTIEKGGVVK--AICGKGLASLSRSEIDKLTALAQSFGAKGLAWI 356

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +           P+ K  +      I  ++ ++DGD   F+A             R  
Sbjct: 357 KVK------NGFESPIVKFFSESLLREIAEKVGVEDGDMILFVADKKSLANEVLGRLRLE 410

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS--- 476
           IA+    I    F F W++DFP +EW+EEEK+    H+PFT P+                
Sbjct: 411 IAER-AQIKKEGFYFAWVLDFPLFEWDEEEKRFVSMHHPFTSPKDEDIDKLLKIPQEAFY 469

Query: 477 --------IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
                   IKA  YD+V NG+E+  G IR H +++    F  + IS+E ++ RFG    A
Sbjct: 470 DPQSSVKDIKAKAYDIVLNGYELGGGSIRIHKADIQEHIFRILAISEEEIKRRFGFFVEA 529

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
            + G PPHGGIA G+DR+VM++ GA ++R+V  FP +Q     L  +PS V+++QLREL 
Sbjct: 530 LRYGAPPHGGIALGLDRLVMVMTGANSLRDVIAFPKTQKAFCPLSEAPSEVNLKQLRELH 589

Query: 589 LRI 591
           +++
Sbjct: 590 IKL 592


>gi|153816116|ref|ZP_01968784.1| hypothetical protein RUMTOR_02364 [Ruminococcus torques ATCC 27756]
 gi|145846601|gb|EDK23519.1| hypothetical protein RUMTOR_02364 [Ruminococcus torques ATCC 27756]
          Length = 569

 Score =  592 bits (1527), Expect = e-167,   Method: Composition-based stats.
 Identities = 224/577 (38%), Positives = 329/577 (57%), Gaps = 11/577 (1%)

Query: 24  SGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCIDGLVMSR 80
            GWV + R  GG++F+D+RD  GI QVV      D+A  E A  +RSE+V+ I G V  R
Sbjct: 1   MGWVQKNRNKGGLVFVDVRDRSGIIQVVCEEGKTDAALIEKAAGLRSEYVVAIVGEVAMR 60

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           S   +N  I TG+IE+   ++ ILS A   P P+    +  E +R KYR+LDLRR  L +
Sbjct: 61  SG-AVNDKIATGEIEVIPSELRILSEALTPPFPIEENSKTKEEVRLKYRYLDLRRADLQR 119

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           N++ +++++   R     E F+E  TP+L  S+PEGARD+LVPSRV+ GSFY LPQ+PQ 
Sbjct: 120 NLMMKSQVMTLTRQFFSEEGFLEVETPVLGKSTPEGARDYLVPSRVHPGSFYGLPQSPQL 179

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           YKQLLM SGFDRY QIA CFRDED R+DR P EF Q+DME+SFV+ D++++  E  L  V
Sbjct: 180 YKQLLMCSGFDRYIQIARCFRDEDLRADRQP-EFTQIDMELSFVDVDEVIDVNERYLARV 238

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
           F+E    + V     R+ + +A+ R+G+DKPDLR  + + +VT+   +  F VF+  +  
Sbjct: 239 FKEVLGVD-VPLPIQRMTWQEAMDRFGSDKPDLRFGMELTDVTDVVKNCGFSVFTGAVEN 297

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
                      +GG   R   D++  + +  G  GLAYI  + D     +     AK + 
Sbjct: 298 GGSVRGINAKGQGG-MPRKKIDKLTAFVKDYGAKGLAYIAIQEDG----SIKSSFAKFMT 352

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
               +A+   +  + GD   F A             R  +A++L +++ N F F WI +F
Sbjct: 353 EEEMDALIKAMGAEAGDLLLFAADKNKVVWDSLGALRVELAKQLELLDKNEFRFVWITEF 412

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P  EW+EE+ +    H+PFTMP      L  +D   ++A  YD+V NG EI  G +R   
Sbjct: 413 PLLEWSEEQNRYVAMHHPFTMPMEEDLPLIDSDPGKVRAKAYDIVLNGNEIGGGSVRIFQ 472

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            ++  + F  +G +KE   ++FG L  AF+ G+PPH G+A G+DR+VML+    ++R+V 
Sbjct: 473 DDIQEKMFEVLGFTKEQAYSQFGFLLDAFKYGVPPHAGLAYGLDRLVMLMAKQDSIRDVI 532

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            FP  ++   L+  +PS V V+QL ELGL      +K
Sbjct: 533 AFPKVKDASCLMTEAPSVVDVKQLNELGLETTAETEK 569


>gi|332879234|ref|ZP_08446931.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332682654|gb|EGJ55554.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 586

 Score =  592 bits (1527), Expect = e-167,   Method: Composition-based stats.
 Identities = 219/595 (36%), Positives = 336/595 (56%), Gaps = 19/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
            +RT++CG+L ++D G  V L+GWV RVR  GG+ F+D+RD YGITQ+V N +   A   
Sbjct: 1   MFRTNTCGELRLADAGKTVTLAGWVQRVRKMGGMTFVDLRDRYGITQLVFNEEVNDALCA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E V+ I G V  R  E+ N N+ TG+IE+   ++ +L+ +   P  +    + 
Sbjct: 61  RANKLGREDVIQIKGEVNER--ESKNKNLPTGEIEIIVSELTVLNASATPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  + KN+  R ++   +R  + ++ F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRACVRKNLELRHQMTMEVRRYLDSKGFLEIETPMLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +G DRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D++   E + + +F        ++  F R+ + +A+R YG+DKPD R  +   
Sbjct: 238 MSFVEQEDVIALFEGMAKHLFRTIRGIE-LTEPFPRMPWSEAMRLYGSDKPDTRFGMEFV 296

Query: 301 NVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + +    + EF VF+    +                 R   D++ ++ +    G  GL 
Sbjct: 297 ELMDVLKGTGEFSVFNDASYIGG-----ICAPGCASYTRKQLDQLTDFVKRSQIGAKGLV 351

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADA 416
           Y   R+ E G+V     V K         ++  +    GD    ++G D +K      + 
Sbjct: 352 YA--RVQEDGSVK--SSVDKFYTQEVLLRLKETMKAVPGDLILIMSGEDVMKTRKQLCEL 407

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L  ++  +
Sbjct: 408 RLEMGSRLGLRDKNKFSLLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDSNPAA 467

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD+VCNG E+  G IR H  E+  + F  +G ++E  + +FG L  AF+ G PPH
Sbjct: 468 VRADAYDMVCNGVEVGGGSIRIHDPELQDKMFKILGFTEERAQEQFGFLMNAFKYGAPPH 527

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GG+A G+DR V L  G  ++R+   FP + +  D+++ +PS +  +QL EL L +
Sbjct: 528 GGLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSYIDQKQLDELNLAL 582


>gi|253565618|ref|ZP_04843073.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251945897|gb|EES86304.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_2_5]
          Length = 585

 Score =  592 bits (1527), Expect = e-167,   Method: Composition-based stats.
 Identities = 224/598 (37%), Positives = 335/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            +RTH+CG+L +SDV   V+LSGWV R R  GG+ F+D+RD YGITQ+V N   D+   E
Sbjct: 1   MFRTHTCGELRISDVNKQVKLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEIDAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ I G V  R ++  N++I TG IE+   ++ IL+ A   P  +    + 
Sbjct: 61  RANKLGREFVIQIVGTVNERFSK--NSHIPTGDIEIIVSELNILNSAITPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  +  N+  R ++   +R  +    F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRSAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D++ T E + + +F+   N   ++  F R+ + +A+R YG+DKPD+R  +   
Sbjct: 238 MSFVEQEDVITTFEGMAKHLFKVIRNIE-LAEPFPRMPWSEAMRLYGSDKPDIRFGMQFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     +              G  R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDILKGHGFSVFDNATYIGG-----ICAEGAAGYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  G V     V K       + ++     + GD    ++GD   K      + R
Sbjct: 352 A--RIEADGTVK--SSVDKFYTQEVLQQLKEAFGAKPGDLILILSGDDAMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   +  ++
Sbjct: 408 LEMGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTNPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RANAYDMVINGVEVGGGSIRIHDSQLQNKMFELLGFTPERAQEQFGFLMNAFKFGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +P+ +   QL EL L +    
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLEELNLIVDIKE 585


>gi|57236953|ref|YP_178754.1| aspartyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|62287516|sp|Q5HVD1|SYD_CAMJR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|57165757|gb|AAW34536.1| aspartyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058054|gb|ADT72383.1| Aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 583

 Score =  592 bits (1527), Expect = e-167,   Method: Composition-based stats.
 Identities = 242/596 (40%), Positives = 344/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+      EIA
Sbjct: 2   RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            + R+E+VL  +G +  R    IN  + TG+IE+   K+ I + +  +P     +    E
Sbjct: 62  SNARNEFVLIAEGTIRPRGEGLINPKLKTGEIEVVVSKLTIENES-AVPPFAIADESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++N  E  L+ +F+       +   F ++ Y DA+  YG+DKPDLR  +   +V
Sbjct: 240 FCEQKDVINVAETFLKDIFKACGKE--IQTPFRQMQYKDAMENYGSDKPDLRFNLKFIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R  +
Sbjct: 358 VKED-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ N  EF W++DFP +E N++       H+PFTMP+   E     DL  I + 
Sbjct: 413 ANELKLIDPNALEFLWVVDFPMFEQNDD-GSYSAMHHPFTMPKNIDE----TDLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+ GA N+REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 528 IGLDRLIMLVTGANNIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|325860267|ref|ZP_08173391.1| aspartate--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325482233|gb|EGC85242.1| aspartate--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 585

 Score =  592 bits (1527), Expect = e-167,   Method: Composition-based stats.
 Identities = 217/595 (36%), Positives = 337/595 (56%), Gaps = 20/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT++CG+L +SD G  V L+GWV R R  GG+ FLD+RD YGITQ+V N   D+A   
Sbjct: 1   MYRTNTCGELRISDAGKEVTLAGWVQRSRKMGGMTFLDLRDRYGITQLVFNEADDAALCG 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + + G+V  R   + N+ I TG IE+ A+++ +LS +   P  +    + 
Sbjct: 61  EANKLGREYCIQVKGIVSERQ--SRNSKIPTGDIEIIAKELNVLSPSLTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR+ + KN+  R R+   +R  + A+ F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRREAVRKNLELRHRMTILIRNFLDAQQFMEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++N  E + R +F E            ++ + +A++R+G+DKPDLR  +   
Sbjct: 238 MSFVDQEDVINLFEEMARHLFREIRGIELPKL--EQMTWHEAMKRFGSDKPDLRFGMEFV 295

Query: 301 NV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + ++      F VF +   +        +       +R   + + ++ +    G  GL 
Sbjct: 296 ELMSDLKGTGSFSVFDEAAYIGG-----IVVPGCADYSRKQLNELTDFVKRPQIGAHGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           +I +  D          + K       + ++     +DGD    ++GD   K        
Sbjct: 351 FIKYNADG----TVKSSIDKFYTPEQLQKVKETTGARDGDLVLILSGDNANKTRIQLCSL 406

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L       
Sbjct: 407 RLEMGSRLGLRDKNVFKCLWIIDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDKHPEQ 466

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G +R H +++  + F  +G + E  E +FG L  AF+ G PPH
Sbjct: 467 VRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAPPH 526

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR V +L G  ++R+   FP + +  D+++ +PS +  +QL EL +++
Sbjct: 527 AGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDIMLDAPSAIDQKQLDELEIKL 581


>gi|294101541|ref|YP_003553399.1| aspartyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616521|gb|ADE56675.1| aspartyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 602

 Score =  592 bits (1527), Expect = e-167,   Method: Composition-based stats.
 Identities = 236/599 (39%), Positives = 347/599 (57%), Gaps = 14/599 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CG+L +    + V L+GWV R R  GG+IF+++ D+ G+TQVV NP+      E 
Sbjct: 12  KRTVRCGELSLDQEDNKVVLNGWVRRRRDLGGLIFIELWDYTGVTQVVINPELVPEVHER 71

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EY 120
           AKS+RSE+V+ + G V  R   T+N ++ TG+IE+ A+   +LS A  LP  V     + 
Sbjct: 72  AKSLRSEFVISVHGKVRKRPEGTVNLSMKTGEIEVVAEDFMLLSPAAPLPFEVSDATNKV 131

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E++R +YR+LDLRRD + +N+  R +II   R  +   +F++  TP+LT S+PEGARD+
Sbjct: 132 DENLRLRYRYLDLRRDKMQRNLRIRNQIIRFTRDFLARYDFVDIETPMLTKSTPEGARDY 191

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRVN G+FYALPQ+PQ +KQ+LM SGFDRY+QI  CFRDED R+DR P EF Q+DME
Sbjct: 192 LVPSRVNPGTFYALPQSPQIFKQILMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDME 250

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+ ++DI   +E  + G+F E +  +     F ++ Y +A+ R+G+DKPDLR P  +H
Sbjct: 251 MSFITEEDIYALVEEFMAGLFREIAQVDI-PTPFRKMDYWEAMDRFGSDKPDLRIPFEIH 309

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V   F  S+F  F  +L+         +P  G   +R     + E A+  G  GLA   
Sbjct: 310 DVAYIFKESDFAPFKDLLAKGGYVRGLPLP-GGASLSRKEVSLVEEKAKKLGASGLACFQ 368

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD--PLKFCSFAADARN 418
           ++          GP+ K L+    + +  +  + +GD  FF+ GD             R 
Sbjct: 369 FK-----EGCLKGPLVKFLSEEQRQRLVEKAALHEGD-AFFVLGDLNRSVASQILGQLRL 422

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+E  +++ + +EF W++ FP +E +EEE +    H+PFT P         ++   ++
Sbjct: 423 DLAKEHNLMDRDKWEFLWVVHFPLFERDEEENRWVAVHHPFTSPVIEDLPFLDSEPQKVR 482

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD V NG EI  G IR H  E+  + F  +  S+E    RFG L  A   G PPHGG
Sbjct: 483 SRAYDCVLNGNEIGGGSIRIHDPEIQEKVFQCLAFSREEARKRFGFLLDALSSGTPPHGG 542

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           IA G+DR+VMLL GA ++R+V  FP +Q    L+ G+PS VS EQL EL +  +    +
Sbjct: 543 IAFGVDRLVMLLCGASSIRDVMAFPKTQKAQCLMSGAPSFVSQEQLDELHIDSLAEEDQ 601


>gi|310657332|ref|YP_003935053.1| aspartyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308824110|emb|CBH20148.1| aspartyl-tRNA synthetase [Clostridium sticklandii]
          Length = 700

 Score =  592 bits (1526), Expect = e-167,   Method: Composition-based stats.
 Identities = 242/605 (40%), Positives = 345/605 (57%), Gaps = 10/605 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFE 60
            RT  C  L   D+ +   + GWV R R  GG+IFLD+RD  GI QVV    N     FE
Sbjct: 9   KRTVYCNVLREKDIDTNQIVMGWVQRRRDLGGVIFLDLRDKTGIIQVVIDAKNVSEEDFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ I G V  R  +TIN N+ TG I++ A ++ ILS A+  P  +      
Sbjct: 69  KAEGIRSEYVVAIKGRVEKRDEDTINPNLETGTIDIRATEVRILSKAKTPPFMIEDASLV 128

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R  +R+LDLRR  + +N+  R ++I+++R  +I ++F+E  TPILT S+PEGARDF
Sbjct: 129 KEELRLTHRYLDLRRPAMLENLKMRQQVISTVRNYLIEQDFLEVETPILTKSTPEGARDF 188

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+++G+FYALPQ+PQ YKQLLM  G D+YFQ+A CFRDED R+DR P EF QLDME
Sbjct: 189 LVPSRMDKGTFYALPQSPQIYKQLLMVGGVDKYFQVAKCFRDEDLRADRQP-EFTQLDME 247

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+Q+D++  +E++   +  +          F R+ YD+A+  YG+DKPD R    M 
Sbjct: 248 LSFVDQEDVIELLEHLFSKIGSDVLKREF-KTPFRRLTYDEAMSLYGSDKPDTRFGFEMV 306

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+      F VFSKI +     +   +   G    R   + + E A S G  G+A+I 
Sbjct: 307 DLTDIAKTCSFEVFSKIANSTGIVKAINVK-GGDSFTRTQIEELTEKAVSYGGKGMAWIA 365

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D+         + K       ++I  ++  + GD   F A             R   
Sbjct: 366 IGQDK----ELKSVLTKFFKKEEMDSILDKMQAEPGDLIIFCADKESAVYKILGGLRLDA 421

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A  LG+   + FEF  + DFP  EW+EEEK+    H+PFTMP+    +L  +D   ++A 
Sbjct: 422 ADMLGLRKKDDFEFLVVTDFPLLEWSEEEKRYVAMHHPFTMPKDEDFALMESDPGLVRAK 481

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+ SG IR H  E+  + FS +G S+E  + RFG +  AF+ G PPHGG A
Sbjct: 482 SYDIVLNGVELGSGSIRIHEQELQAKMFSLLGFSEEEAKERFGFMLEAFEYGTPPHGGFA 541

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            GIDR+VMLL G+ ++REV  FP  ++   +++ SPSTVS +QL EL L        I K
Sbjct: 542 FGIDRLVMLLTGSSSIREVIAFPKMRDGSCVMISSPSTVSDDQLSELELYTKAQGAVIKK 601

Query: 601 ISVTT 605
               +
Sbjct: 602 SESKS 606


>gi|283954077|ref|ZP_06371602.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794356|gb|EFC33100.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 583

 Score =  592 bits (1526), Expect = e-167,   Method: Composition-based stats.
 Identities = 242/596 (40%), Positives = 348/596 (58%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H   DLG+S VG  ++L GWV+  R HGG+IF+D+RD  GI Q+V +P+      EIA
Sbjct: 2   RSHYNTDLGISHVGQNIKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKQAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            + R+E+VL ++G++  R    +N  + TG+IE+   K+ I + +  +P     +    E
Sbjct: 62  SNARNEFVLIVEGIIRPRGEGLVNPKLKTGEIEVVVSKLIIENES-AVPPFTIADESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  + +  F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRNPKLYENFALRSKACIAARNSLASMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++N  EN L+ +F+       +   F ++ Y DAI  YG+DKPDLR  +   +V
Sbjct: 240 FCEQKDVINVAENFLKDIFKACGKE--IQTPFRQMRYKDAIENYGSDKPDLRFDLKFIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFAKSNNEIFANIAKDIKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R  +
Sbjct: 358 VKED-----GLKGPLCKFFSEEDLNKLSKRCELEVGDVVFFGAGTKKTVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ N  EF W++DFP +E N++       H+PFTMP+   E    NDL  I + 
Sbjct: 413 ANELNLIDPNALEFLWVVDFPMFEQNDD-GSYSAMHHPFTMPKNIDE----NDLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I +E    +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQREKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 528 IGLDRLIMLVTGANSIREVIAFPKTQKAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|237740162|ref|ZP_04570643.1| aspartyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229422179|gb|EEO37226.1| aspartyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 592

 Score =  592 bits (1526), Expect = e-167,   Method: Composition-based stats.
 Identities = 224/594 (37%), Positives = 340/594 (57%), Gaps = 16/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+  +L   ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLAELREKNIGETVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NPNIPTGDIEVFAKEIEILNACDTLPFQISGIDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TPILT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMINNLKMRHRMIMSIRNYMDQAGFLDVDTPILTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  +     +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVTGEE-ANYTFQRMPYAEAMDRFGSDKPDLRFAVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG-QPGLA 357
           + ++++   +S F  FS  +      +    P+     +R       E+ ++     GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAIVAPSANEKFSRKIISEYEEYVKTYFDAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI       G      P+AK L+    +AI  + + + GD  F +A       +     R
Sbjct: 359 YIKL-----GADGISSPIAKFLSEDEMKAIIEKTEAKTGDVIFIVADKKKVVAAALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLS 476
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT  +              
Sbjct: 414 LRIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFTSIKAEDLDKFLAGQTED 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I+   YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF+ G PPH
Sbjct: 474 IRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFGFFLDAFKYGAPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           GG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL ++
Sbjct: 534 GGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDDKQLEELFIK 587


>gi|333030609|ref|ZP_08458670.1| aspartyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332741206|gb|EGJ71688.1| aspartyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 588

 Score =  592 bits (1526), Expect = e-167,   Method: Composition-based stats.
 Identities = 220/600 (36%), Positives = 338/600 (56%), Gaps = 18/600 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            +RTH+CG+L +SD+   V LSGWV R R  GG+ F+D+RD YGITQ+V N   D    +
Sbjct: 1   MFRTHTCGELRISDIEKVVTLSGWVQRSRKMGGMTFIDVRDRYGITQLVFNEASDKELCD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  RS++  N  I TG+IE+  +K+++L+ +   P  +  + + 
Sbjct: 61  RANKLGREFVIQVVGKVSERSSK--NDKIATGEIEILVEKLDVLNTSATPPFTIEEKTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + KN+  R ++   +R  +  + F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRPNVRKNLELRHKMTMEVRRYLDNQGFLEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGEFYALPQSPQIFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+++  E + + +F+           F RI + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDVISNFEGMAKHLFKTIRGIELTET-FPRITWHDAMKYYGSDKPDLRFDMQFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAY 358
            + +      F VF     +                 R   D++ ++ +    G  G+ Y
Sbjct: 297 ELMDVLKGHGFGVFDSAEYIGG-----ICVKGAASYTRKQLDQLTDYVKRPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADAR 417
              R++  G+V     V K       + ++   + +  D    ++GD  +K      + R
Sbjct: 352 A--RVNADGSVK--SSVDKFYTQEVLQEMKAAFNAEPEDLILILSGDNCMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A ELG+ + N F   W++DFP +EW+EE+++    H+PFT P+        +D   +
Sbjct: 408 LKVADELGLRDKNKFACLWVIDFPLFEWDEEDERFVAVHHPFTSPKEEDIQYIDSDPGRV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H SE+  + F  +G + E  + +FG L  AFQ G PPHG
Sbjct: 468 RANAYDMVINGVEVGGGSIRIHDSELQNKMFEVLGFTPEKAKEQFGFLMNAFQYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           GIA G+DR V L     ++R+   FP + +  D+++ +P+ +   QL EL L +    ++
Sbjct: 528 GIAYGLDRWVSLFAELDSIRDCIAFPKNNSGRDVMIDAPAQLDPSQLDELHLIVDVKEEE 587


>gi|285019195|ref|YP_003376906.1| aspartyl tRNA synthetase [Xanthomonas albilineans GPE PC73]
 gi|283474413|emb|CBA16914.1| putative aspartyl trna synthetase protein [Xanthomonas albilineans]
          Length = 583

 Score =  592 bits (1526), Expect = e-167,   Method: Composition-based stats.
 Identities = 214/590 (36%), Positives = 328/590 (55%), Gaps = 12/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI Q++  P++   F++A 
Sbjct: 2   RTHFCGLVDETLIGQTVTLAGWTDVARNLGGVCFIDLRDHEGIVQIMVEPENAEVFKVAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+  E VL ++G+V +R A  +N  + +G++E+ A  I +L+ A    LP        E 
Sbjct: 62  SLGYEDVLQVEGVVRARHA--VNDKLRSGKVEVIASAISVLNKAAP--LPFHAHENPGEE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + +    R +++ ++R  +    F +  TPILT ++PEGARDFLVP
Sbjct: 118 TRLKYRYLDLRRPEMQRMQRTRIKLVQALRRYLDERGFQDIETPILTKATPEGARDFLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLDME +F
Sbjct: 178 ARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLDMEFAF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V + D+ + +E ++R +F++  +    +  F R+ + +A+RRYG+DKPDLR  + + +V 
Sbjct: 237 VRERDVQDFVEAMVRTIFKDVVDVELDAG-FPRMTWAEAMRRYGSDKPDLRIDLELVDVA 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E     +F  FS   +   G        +G   +R   D     A   G  GLAY+  ++
Sbjct: 296 EQVKACDFAAFSSAANDPDGRVAALRIPRGASLSRKQIDEYAAHAAKYGAKGLAYV--KI 353

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            +SG ++   P+ K  +    +A+   +    GD  FF AG   K   F    R    ++
Sbjct: 354 ADSGEIS--SPIQKFFDGAAFDALLAHVGAGRGDIVFFGAGAYTKVSDFMGALRLKAGKD 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G+I    +   W+ DFP +EW+EE ++    H+PFT P     +       +  +  YD
Sbjct: 412 FGLI-AVGWRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIATLRAHAKTAVSRGYD 470

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG EI  G IR H  ++    F  +GI  E    +FG L  A   G PPHGGIA GI
Sbjct: 471 MVLNGNEIGGGSIRIHRPDMQSAVFELLGIGAEEARAKFGFLLDALNYGAPPHGGIAFGI 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           DRI  L+ G +++R+V  FP +    DL+  +PS ++  QL E+ +++  
Sbjct: 531 DRIAALMAGTESIRDVIPFPKTTGAQDLMTDAPSPIADTQLAEVHVQVRP 580


>gi|262066989|ref|ZP_06026601.1| aspartate--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291379295|gb|EFE86813.1| aspartate--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 592

 Score =  592 bits (1526), Expect = e-167,   Method: Composition-based stats.
 Identities = 226/594 (38%), Positives = 342/594 (57%), Gaps = 16/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+  +L V ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLAELRVKNIGETVILSGWVDTKRNVSTNLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NPNIPTGDIEVFAKEIEILNACDTLPFQISGIDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TPILT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMINNLKMRHRMIMSIRNYMDQAGFLDVDTPILTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  +     +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVTGEE-ANYTFQRMPYAEAMDRFGSDKPDLRFAVE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++++   +S F  FS  +      +    P+     +R       E+ ++  G  GLA
Sbjct: 299 LKDLSDIVKNSSFNAFSSTVQNGGLVKAIVAPSANEKFSRKIISEYEEYVKTYFGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           YI       G      P+AK L+    +AI  + + + GD  F +A       +     R
Sbjct: 359 YIKL-----GADGISSPIAKFLSEDEMKAIIEKTEAKTGDVIFIVADKKKVVAAALGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLS 476
             I ++L +IN + F+F W++DFP ++++EEE++    H+PFT  +              
Sbjct: 414 LRIGKDLDLINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFTSIKAEDLDKFLAGQTED 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I+   YDLV NG EI  G IR    ++    F  +G+S+E  + +FG    AF+ G PPH
Sbjct: 474 IRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFGFFIDAFKYGAPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           GG+A GIDR +M++L  +++R+V  FP +     L+  +P+TV  +QL EL ++
Sbjct: 534 GGLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDDKQLEELFIK 587


>gi|288802549|ref|ZP_06407988.1| aspartate--tRNA ligase [Prevotella melaninogenica D18]
 gi|302346403|ref|YP_003814701.1| aspartate--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|288335077|gb|EFC73513.1| aspartate--tRNA ligase [Prevotella melaninogenica D18]
 gi|302150945|gb|ADK97206.1| aspartate--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 585

 Score =  592 bits (1526), Expect = e-167,   Method: Composition-based stats.
 Identities = 216/595 (36%), Positives = 336/595 (56%), Gaps = 20/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT++CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   ++    
Sbjct: 1   MYRTNTCGELRLSDAGKEVTLAGWVQRARKMGGMTFVDLRDRYGITQLVFNEADNADLCG 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + + G+V  R ++  N+ I TG IE+ A+++++LS +E  P  +    + 
Sbjct: 61  EANKLGREYCIQVKGVVNERQSK--NSKIPTGDIEIIAKELKVLSSSETPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR+ + KN+  R R+   +R  + A  F+E  TPIL  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRREAVRKNMELRHRMTILIRNFLDAAQFMEVETPILIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++N  E + R +F E            ++ + DA++RYG+DKPDLR  +   
Sbjct: 238 MSFVDQDDVINLFEEMARHLFREIRGVELPKL--EQMKWHDAMKRYGSDKPDLRFGMEFV 295

Query: 301 NVTEHFVHSE-FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + +    +  F VF +   +                +R   + + ++ +    G  GL 
Sbjct: 296 ELMDDLKGTGSFSVFDEAAYIGGIVV-----PGCADYSRKQLNELTDFVKRPQVGAQGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADA 416
           +I +  D          + K         ++     +DGD    ++G+   K        
Sbjct: 351 FIKYNADG----TIKSSIDKFYTEEQLLKVKETTGAKDGDLVLILSGNNVRKTQVQLCSL 406

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L       
Sbjct: 407 RLEMGDRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIKLLDEHPEQ 466

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G +R H +++  + F  +G + E  + +FG L  AF+ G PPH
Sbjct: 467 VRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTPESAKAQFGFLMNAFKYGAPPH 526

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR V ++ G  ++R+   FP + +  D+++ +PS +  +QL EL +++
Sbjct: 527 AGLAFGLDRFVSIMAGLDSIRDCIAFPKNNSGRDVMLDAPSFIDQKQLDELEIKL 581


>gi|149199233|ref|ZP_01876271.1| aspartyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149137658|gb|EDM26073.1| aspartyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 591

 Score =  592 bits (1525), Expect = e-167,   Method: Composition-based stats.
 Identities = 225/596 (37%), Positives = 325/596 (54%), Gaps = 9/596 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             RTH CG+L   +    V LSGW+   R  GG+IFLD+RD  G  QV   PD       
Sbjct: 1   MKRTHKCGELRPENKDQEVILSGWIKSRRDLGGLIFLDLRDRSGFVQVNIEPDAGEELMS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +  S+R EWV+ + G V  R    IN  + TG +E+  Q ++I + A  +P  +  ++  
Sbjct: 61  LGNSLREEWVISVKGKVRCRPENMINKKLPTGAVEVVVQDLKIENKARPMPFNLDDDK-V 119

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YR+LD RR  L + +V R RI  ++R     +NF+E  TPIL+ S+PEGARD+
Sbjct: 120 NEEMRLRYRYLDFRRPALTEKMVLRHRITKTLRDYFDDQNFLEIETPILSKSTPEGARDY 179

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQAPQQYKQLLM  G +RYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 180 LVPSRVHPGQFYALPQAPQQYKQLLMVGGLERYFQIARCFRDEDLRADRQP-EFTQVDLE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF++++DI + +E ++  + +E    +     F R+ Y +A+ R+G+DKPD R  + + 
Sbjct: 239 MSFIDEEDIYSLLEGLMSRIMKEVKGIDI-PTPFQRLDYFEAMTRFGSDKPDTRFGMELI 297

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           N+     +SEF+VF+  L+         +                  A+  G  GLA I 
Sbjct: 298 NLEPALKNSEFKVFADTLANGGRIGAINVKGGNKFATNKTIKEWTAHAQLYGAKGLATIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D     +    + K L      AI    +++  D     A      C      R HI
Sbjct: 358 VKEDG----SWKSSITKFLKEDEVAAITETANLEVDDVLLIAADSFTTSCEVLGQLRLHI 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++  +I  + + + W+ DFP    +EE +     H+PFT P         +D  SI+A 
Sbjct: 414 AKQTDMIPEDQWNYLWVTDFPLLVQDEETQDWHAMHHPFTAPHESDRDKMQSDRGSIRAR 473

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H +++  + F  +GIS+E  +++FG +  A   G PPHGG+A
Sbjct: 474 AYDLVLNGCELGGGSIRIHDTQLQSEMFDALGISQEEAQHQFGHILDALAFGAPPHGGLA 533

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR+VMLL GA ++REV  FP +     L+  SPS VS +QL EL ++     K
Sbjct: 534 LGLDRMVMLLTGASSLREVIPFPKTAKASCLMTQSPSPVSDDQLEELSIKTDVKEK 589


>gi|32267300|ref|NP_861332.1| aspartyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|46577202|sp|Q7VF76|SYD_HELHP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|32263353|gb|AAP78398.1| aspartyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 581

 Score =  592 bits (1525), Expect = e-167,   Method: Composition-based stats.
 Identities = 235/594 (39%), Positives = 338/594 (56%), Gaps = 17/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH C +LG   +G+ V++ GW +  R HGG++F+D+RD  GI Q+V +P +    IA S
Sbjct: 3   RTHLCAELGEEHIGTEVQVCGWCNTYRDHGGVVFIDLRDKSGIVQLVCDPSTQAHAIASS 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR E+VL   G V +R A   N  + TG IE+    + I + +   P    G+    E +
Sbjct: 63  VRDEYVLVAKGKVRARGAGLENPKLKTGMIEIVLNSLIIENKS-PTPPIAIGDESVNEEL 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    +     R+    + R  +    F+E  TPILT ++PEGARD+LVPS
Sbjct: 122 RLKYRYLDLRSPKAYNIFKIRSDAAIATRNSLQKMGFLEVETPILTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+QG FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMSF 
Sbjct: 182 RVHQGEFYALPQSPQLFKQLLMMSGFDKYFQIAKCFRDEDLRADRQP-EFTQIDIEMSFC 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQ+DI++  EN+L+ +F        +   F+R+ Y  A+  YG+DKPDLR  + +  V +
Sbjct: 241 EQEDIISVAENLLKDIFSACG--TEIEIPFMRLPYAQAMESYGSDKPDLRFCMPLVEVGD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            FV S   +F  I   +    + A+  KGG    +R       ++ R  G  GLAYI  +
Sbjct: 299 LFVDSSNAIFKNIAQDSKNNRIKALCVKGGDTFFSRKTLGEAEDFVRKFGAKGLAYIQIK 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E       GP+ K ++      +  R+  + GD  FF AG       +    R  +A+
Sbjct: 359 ENE-----LKGPLVKFISESALNELVSRVKAEVGDIIFFGAGAKKIVWDYMGRLRLKVAE 413

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ++ +IN N ++F W++DFP +E +E   K    H+PFTMP      L   D+  I +  Y
Sbjct: 414 DMKLINENEYKFLWVVDFPMFEKDE--GKTKALHHPFTMPN----DLDKEDIEEITSVAY 467

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H   +  + F  +GIS +  E++FG L  A   G PPHGGIA G
Sbjct: 468 DVVLNGIELGGGSIRIHKDSIQKRVFELLGISTQEAEDKFGFLLEALSFGAPPHGGIAIG 527

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            DR++MLL  ++++R+V  FP +Q     L  +PS V+ EQL+EL +R+    K
Sbjct: 528 FDRLIMLLSKSQSIRDVIAFPKTQRATCPLTLAPSKVNDEQLKELHIRVKNELK 581


>gi|329935902|ref|ZP_08285704.1| aspartyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329304593|gb|EGG48469.1| aspartyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 587

 Score =  592 bits (1525), Expect = e-167,   Method: Composition-based stats.
 Identities = 297/597 (49%), Positives = 400/597 (67%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVGS VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRASDVGSDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E  + +DG V+SR AE +NA++ TG+IE+   ++E+L  A  LP  +  E   
Sbjct: 61  ALDKLSKESTVRVDGKVVSRGAENVNADLPTGEIEVEVGEVELLGAAAPLPFTINTEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+++R +M A NF E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMAAMNFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF  G  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTDLFEEFGGGRPVTSPFPRIPFREAMAKYGSDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F  SEF+ F+        +             R F D++ E+A  QG  GLA++ 
Sbjct: 301 DLTDIFAGSEFKAFA------GKHVRALPVPDVAAQPRKFFDQLGEYAVEQGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G++   GP+AK L   N   +  RL +  G + FF AG+  +        R   
Sbjct: 354 -RVAEDGSLT--GPIAKFLTEENVAELTKRLSLAAGHAVFFGAGEYDEVSKIMGAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G    N F FCWI+DFP YE +EE  KIDF+HNPF+MPQGGM++L+  D L I A+
Sbjct: 411 AKRAGHFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMDALENQDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  ++ML+AF   G   E VE  F G+ RA + G PPHGGIA
Sbjct: 471 QYDIVCNGVELSSGAIRNHEPDIMLKAFEIAGYEHETVEREFAGMLRALRFGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL L + +   K
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELEETRLRELHLTVRKPQAK 587


>gi|62287580|sp|Q74IX4|SYD_LACJO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 614

 Score =  592 bits (1525), Expect = e-167,   Method: Composition-based stats.
 Identities = 217/610 (35%), Positives = 348/610 (57%), Gaps = 11/610 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N D      EI
Sbjct: 3   KRTDYAGNITSKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGEKLMEI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+ +E V+ + G V+ RS  ++N  + TG++E+ A +I++L+ ++  P  +  +    
Sbjct: 63  ADSLNNEDVIEVKGKVVKRS--SVNPEMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAA 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR TL + I+ R++I+ ++      + FI+  TPIL  SSPEGARD+L
Sbjct: 121 EQTRLKYRYLDLRRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME 
Sbjct: 181 VPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+++  + +  E +L+ + ++  N + +     RI +D+A+ +YG+DKPD R  + +H+
Sbjct: 240 SFLDEQGVQDYTEGLLKKIMKDVMNID-LKTPIKRITWDEAMNKYGSDKPDTRYEMYLHD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++  F  S+F+VFS  ++     +  A+       +R   +   ++ +     GLA++ +
Sbjct: 299 LSPIFKDSDFKVFSGAIADGGVVKGIAVKNGAKEYSRKKIEEKQDYIKRYNAKGLAWVKY 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E G  +  GP+A+ L   N EA++   D++ G+    +A             R   A
Sbjct: 359 ---EDGEFS--GPIARFLTDENKEALKKEFDLEGGELIVIVADKWKVVTDSLDHLRREFA 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E GII    F+F W++D+P +E++E   +   AH+PFTMP      L   D     A  
Sbjct: 414 HETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHARS 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G+A 
Sbjct: 474 YDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGLAI 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKI 601
           G+DR+ M+L G  N+R+V+ FP + +  + +M +P+ V+ +QL ++G+ + +  +  +K 
Sbjct: 534 GLDRLAMMLAGKDNIRDVTAFPKNASASEPMMHAPAPVADQQLADIGIEVEKQYEDSVKE 593

Query: 602 SVTTILRNVY 611
           +   + +   
Sbjct: 594 TEQRLEKEAQ 603


>gi|254443149|ref|ZP_05056625.1| aspartyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198257457|gb|EDY81765.1| aspartyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 600

 Score =  592 bits (1525), Expect = e-167,   Method: Composition-based stats.
 Identities = 224/601 (37%), Positives = 347/601 (57%), Gaps = 18/601 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
             RTH CG L   DVG  V L GWV  +R HGGI+F+D+RD  G+TQV ANP  D A F 
Sbjct: 1   MKRTHHCGQLRSGDVGKSVALIGWVDSIRDHGGILFIDLRDREGLTQVKANPNSDDANFN 60

Query: 61  IA-KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER- 118
            A  S++ E V+   G V +R+  T+N  + TG+IE+ A  + + +++E  P P+  ++ 
Sbjct: 61  AAINSLKPESVVEFHGEVEARADGTVNPKMPTGEIEVQALTVVVHNISETPPFPIDDDKG 120

Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +  E +R +YR+LDLRR  ++K +  R     S+R  M    F++  TPIL  S+PEGA
Sbjct: 121 DKVNEDMRLRYRYLDLRRSKMNKVVRLRHATSRSIRDYMDENAFVDVETPILFKSTPEGA 180

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R++LVPSR+N G FYALPQ+PQQ+KQ+LM +G +RY+QIA CFRDED R+DR   EF QL
Sbjct: 181 REYLVPSRINPGEFYALPQSPQQFKQMLMVAGVERYYQIARCFRDEDLRADRQ-MEFTQL 239

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+E+SF++++D+ + +E +++ ++++  + + +   F R+ ++DA+ RYG DKPD R  +
Sbjct: 240 DIELSFIDREDMYSLIEGLMKKIWKDVLDVD-LPTPFPRMSFEDAMNRYGVDKPDTRFGL 298

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + + +E F +S F+VF   ++     + +  P       +     + E A+S G  GLA
Sbjct: 299 EIQDFSEAFANSSFKVFQATVAKGGVVKAFKAPTL-ADVTQGEMKNLEEVAKSLGAKGLA 357

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +I  ++ E G      P+ K  +     A+  RL++ +GD  FF A +  + C+     R
Sbjct: 358 FI--KVGEGG--EWKSPIVKFFSEEEKAALSERLELAEGDIVFFAASEWEQACAILGRTR 413

Query: 418 NHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
              A+ L       I  + F+F W+++FP   ++EE       H+PFT P          
Sbjct: 414 LECAELLKKRGRLEIPKDQFDFLWVIEFPLMSFDEERGGYAATHHPFTAPVAEDVQYLDT 473

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV-VENRFGGLYRAFQC 531
           D   ++   YDLV NG E+  G IR H + V  + F +V       V+ RFG +  AF+ 
Sbjct: 474 DPKRVRGQHYDLVLNGVELGGGSIRIHQAAVQKKIFEDVLNIPADVVQERFGYMLEAFKY 533

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR+VM+L G  ++R+V  FP +Q    L+  SP+ V+ +QL++L +  
Sbjct: 534 GAPPHGGIAFGLDRLVMILAGLSSIRDVIAFPKTQKGQCLMTDSPTPVTAKQLKDLHIDT 593

Query: 592 V 592
            
Sbjct: 594 T 594


>gi|265763994|ref|ZP_06092562.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|263256602|gb|EEZ27948.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_16]
          Length = 585

 Score =  592 bits (1525), Expect = e-167,   Method: Composition-based stats.
 Identities = 223/598 (37%), Positives = 334/598 (55%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            +RTH+CG+L +SDV   V+LSGWV R R  GG+ F+D+RD YGITQ+V N   D+   E
Sbjct: 1   MFRTHTCGELRISDVNKQVKLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEIDAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ I G V  R ++  N++I TG IE+   ++ IL+ A   P  +    + 
Sbjct: 61  RANKLGREFVIQIVGTVNERFSK--NSHIPTGDIEIIVSELNILNSAITPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  +  N+  R ++   +R  +    F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRSAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D++ T E + + +F+   N   ++  F R+ + +A+R YG+DKPD+R  +   
Sbjct: 238 MSFVEQEDVITTFEGMAKHLFKVIRNIE-LTEPFPRMPWSEAMRLYGSDKPDIRFGMQFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     +                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDILKGHSFSVFDNATYIGG-----ICAEGAASYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  G V     V K       + ++     + GD    ++GD   K      + R
Sbjct: 352 A--RIEADGTVK--SSVDKFYTQEVLQQLKEAFGAKPGDLILILSGDDAMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   +  ++
Sbjct: 408 LEMGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTNPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RANAYDMVINGVEVGGGSIRIHDSQLQNKMFELLGFTPERAQEQFGFLMNAFKFGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +P+ +   QL EL L +    
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLEELNLIVDIKE 585


>gi|33864480|ref|NP_896040.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|46577196|sp|Q7V3X1|SYD_PROMM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33641260|emb|CAE22390.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
          Length = 606

 Score =  592 bits (1525), Expect = e-167,   Method: Composition-based stats.
 Identities = 225/606 (37%), Positives = 342/606 (56%), Gaps = 28/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           R++ CG+L    + S V+L GWV R R HGG+IF+D+RD  G  Q+  +PD     F  A
Sbjct: 2   RSNGCGELRSKHIASNVKLCGWVDRCRDHGGVIFIDLRDRSGTIQITVDPDQGTELFASA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGERE 119
           +S+R+E VL I GLV  R A+ IN+ + TG+IE+ A  +E+L+         + +  E  
Sbjct: 62  ESLRNETVLQITGLVRPRPADAINSKLSTGEIEVLANGLEVLNPVTGNLPFTVSIHDEEP 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R LDLRR+ + +N+  R   I + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 VKEELRLRHRHLDLRRERMSRNLQLRHTTIKTARHFLEDEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YLVPSRVCSGEWFALPQSPQLFKQLLMVGGLERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q+ IL   E ++  +++     + +   F R+ + +A+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQEQILKLNERLIAAIWKAVKGID-LPLPFPRLTWHEAMDRYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC----DRMNEWARSQGQPG 355
           ++V++      F+VFS  ++     +   +P      +        D  NE A+  G  G
Sbjct: 300 NDVSDILKDMGFKVFSGAIAAGGSVKCITVPNGNDLISNVRIKPGGDIFNE-AQKAGAGG 358

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LA+I  R+ +S  +  +G +  +LN     A+  +   + GD   F AG      S    
Sbjct: 359 LAFI--RVRDSDEIDSIGAIKDNLNSKQKAALLKQTGAKAGDLILFGAGKTATVNSALDR 416

Query: 416 ARNHIAQELGIINCNC----FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            R  + +ELG+I  +     ++F W++DFP +E N EE +++  H+PF  P        G
Sbjct: 417 VRQFLGRELGLIPTDQDNKLWQFLWVVDFPMFELNAEENRLEALHHPFCAPNKDD---LG 473

Query: 472 NDLLS-------IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
           +D  +        +A  YDLV NG E+  G +R H +E+  Q    +G+  E  + +FG 
Sbjct: 474 DDPDAWMERLPQARAQAYDLVLNGLELGGGSLRIHNAELQRQVLQTIGLPLEEAKQQFGF 533

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  A + G PPHGG+A G+DRIVMLL G  ++R+   FP +Q    L+  +P+ VS  QL
Sbjct: 534 LIDALEMGAPPHGGLAFGMDRIVMLLTGEDSIRDTIAFPKTQQARCLMTQAPAGVSNHQL 593

Query: 585 RELGLR 590
            EL + 
Sbjct: 594 EELHVE 599


>gi|315655405|ref|ZP_07908305.1| aspartate--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315490345|gb|EFU79970.1| aspartate--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 599

 Score =  592 bits (1525), Expect = e-167,   Method: Composition-based stats.
 Identities = 234/602 (38%), Positives = 337/602 (55%), Gaps = 31/602 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH C +L ++  G  V L GWV R R HGG+ F+D+RD  GI Q+V + +         
Sbjct: 3   RTHKCAELNLNHDGQTVTLCGWVDRRRDHGGVAFMDLRDASGIVQLVVSEEVVR-----E 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE---YP 121
           VR+E+VL + G V  R     N +I TG+IE+ A  +EIL+    LP  V    E     
Sbjct: 58  VRNEYVLKVTGKVRKRPEGNENPDIATGEIEVMADDVEILNSCATLPFQVSEHAEDSKVG 117

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR +YRF+DLRR  LH N+V R+RI    R  M    F+E  TP LT S+PEGARDF+
Sbjct: 118 EDIRLRYRFVDLRRRQLHDNLVLRSRISQIARRVMEEHEFLEIETPTLTRSTPEGARDFV 177

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLLM  G +RYFQ+A C+RDED R+DR P EF QLDMEM
Sbjct: 178 VPARIRPGSWYALPQSPQLFKQLLMVGGMERYFQLARCYRDEDSRADRQP-EFTQLDMEM 236

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E++L+ +++       ++    R+ + +A+ R+G+DKPDLR    + +
Sbjct: 237 SFVDQDDVIEVTEHLLKEIWKVIG--YDLTTPIPRMPFQEAMDRFGSDKPDLRFGYELVD 294

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+ F  + F++F         Y    +   GG   R   D+  EWA+++G  GLAY+  
Sbjct: 295 LTDFFKDTPFKIFQAP------YVGAVVMPGGGSQPRRTFDKWQEWAKARGAKGLAYVTL 348

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             DE G     GPVAK+++      +      Q GD  FF AGD     +    AR  I 
Sbjct: 349 --DEKGEAG--GPVAKNISDAEKVGLAAATGAQPGDCIFFAAGDKTASQTLLGAARLEIG 404

Query: 422 QELGIINCNCFEFCWIMDFPFYEWN---EEEKK-------IDFAHNPFTMPQGGMESLKG 471
           +   +I+   + F W++D P ++ +   E E             H+ FT P+        
Sbjct: 405 KRCDLIDEKAWAFTWVVDAPLFKPSGEAEAEGDVALGHSAWTAVHHAFTSPKPECLDTFD 464

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D  S  A+ YD+VCNG E+  G IR H  ++  + F  +G S+E  + RFG L  AF+ 
Sbjct: 465 TDPGSALAYAYDIVCNGVELGGGSIRIHRRDIQERVFKVMGFSQEEAQARFGFLLDAFKY 524

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G DRI  +L G+ ++R+V  FP + +  D L G+P+ ++ EQ +E G+  
Sbjct: 525 GAPPHGGLALGWDRIAGMLTGSPSIRDVIAFPKAGDGLDPLTGAPAPITDEQRKETGVDY 584

Query: 592 VE 593
           V 
Sbjct: 585 VP 586


>gi|329667229|gb|AEB93177.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 617

 Score =  592 bits (1525), Expect = e-167,   Method: Composition-based stats.
 Identities = 217/610 (35%), Positives = 348/610 (57%), Gaps = 11/610 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N D      EI
Sbjct: 6   KRTDYAGNITSKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGEKLMEI 65

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+ +E V+ + G V+ RS  ++N  + TG++E+ A +I++L+ ++  P  +  +    
Sbjct: 66  ADSLNNEDVIEVKGKVVKRS--SVNPEMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAA 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR TL + I+ R++I+ ++      + FI+  TPIL  SSPEGARD+L
Sbjct: 124 EQTRLKYRYLDLRRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME 
Sbjct: 184 VPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMET 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+++  + +  E +L+ + ++  N + +     RI +D+A+ +YG+DKPD R  + +H+
Sbjct: 243 SFLDEQGVQDYTEGLLKKIMKDVMNID-LKTPIKRITWDEAMNKYGSDKPDTRYEMYLHD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++  F  S+F+VFS  ++     +  A+       +R   +   ++ +     GLA++ +
Sbjct: 302 LSPIFKDSDFKVFSGAIADGGVVKGIAVKNGAKEYSRKKIEEKQDYIKRYNAKGLAWVKY 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E G  +  GP+A+ L   N EA++   D++ G+    +A             R   A
Sbjct: 362 ---EDGEFS--GPIARFLTDENKEALKKEFDLEGGELIVIVADKWKVVTDSLDHLRREFA 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E GII    F+F W++D+P +E++E   +   AH+PFTMP      L   D     A  
Sbjct: 417 HETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHARS 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G+A 
Sbjct: 477 YDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKSAYEQFGYLMDALDMGFPPHAGLAI 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKI 601
           G+DR+ M+L G  N+R+V+ FP + +  + +M +P+ V+ +QL ++G+ + +  +  +K 
Sbjct: 537 GLDRLAMMLAGKDNIRDVTAFPKNASASEPMMHAPAPVADKQLTDIGIEVEKQYEDSVKE 596

Query: 602 SVTTILRNVY 611
           +   + +   
Sbjct: 597 TEQRLEKEAQ 606


>gi|315124155|ref|YP_004066159.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315017877|gb|ADT65970.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 583

 Score =  591 bits (1524), Expect = e-167,   Method: Composition-based stats.
 Identities = 239/596 (40%), Positives = 343/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+      EIA
Sbjct: 2   RSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            + R+E+VL  +G +  R    +N  + TG+IE+   K+ I + +  +P     +    E
Sbjct: 62  SNARNEFVLITEGTIRPRGEGLVNPKLKTGEIEVVVSKLTIENES-AVPPFAIADESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++   E  L+ +F+       +   F ++ Y DA+  YG+DKPDLR  +   +V
Sbjct: 240 FCEQKDVIKVAETFLKDIFKACGKE--IQTPFRQMQYKDAMENYGSDKPDLRFDLKFIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAEGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R  +
Sbjct: 358 VKKD-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ N  EF W++DFP +E N++       H+PFTMP+   E     DL  I + 
Sbjct: 413 ANELKLIDPNALEFLWVVDFPMFEQNDD-GSYSAMHHPFTMPKNIDE----TDLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 528 IGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|58584273|ref|YP_197846.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58418589|gb|AAW70604.1| Aspartyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 608

 Score =  591 bits (1524), Expect = e-166,   Method: Composition-based stats.
 Identities = 292/606 (48%), Positives = 401/606 (66%), Gaps = 19/606 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+ Y+TH+C +L  +DV   V LSGW++R R HG +IF+D+RD YGITQ+V N D   F 
Sbjct: 9   MNYYKTHTCNELRKNDVEKEVTLSGWMYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFC 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP------- 113
               ++ E V+ + G+V +R+ +TIN +I TG+IE++   ++I S  E            
Sbjct: 69  KISDLKPESVITVTGIVKARTEDTINISISTGEIEVTVNNLQIESEVEFHHNEETAKEER 128

Query: 114 -----VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                +  ++EYPE++RFKYRFLDLRR+ +  NIV R++II  +R  MI + F+E  TPI
Sbjct: 129 SILASIADDQEYPENMRFKYRFLDLRREKVRNNIVLRSQIIAELRKFMIEQGFLEIQTPI 188

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D
Sbjct: 189 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMISGFDKYFQIAPCFRDEDARAD 248

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           R PGEFYQLD+EMSFV Q+D+   +E+ L  VF +FS   +V   F RI Y +A+ +YG+
Sbjct: 249 RSPGEFYQLDLEMSFVTQEDVFQVIESTLYKVFAKFS-RKSVDKGFSRITYKEAMLKYGS 307

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           DKPDLRNP+++ +VTE F  SEF +F   +           P K     R+F D+  E  
Sbjct: 308 DKPDLRNPLLISDVTEIFRDSEFNIFKSNIERGMVVRAIPAP-KTAEEPRSFFDKKIEHT 366

Query: 349 -RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407
            +  G  GL YI +  D        GP+AK L+      IR   +++ GDS FF +    
Sbjct: 367 QKEFGAKGLGYITFNKDG----TAKGPIAKFLDDNRLNHIREATNIKPGDSVFFASDKEN 422

Query: 408 KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
           +  + A   R  +  ELG+I+ N F+FCW++DFP++ ++++ KKIDF HNPF+MP GG++
Sbjct: 423 EAATIAGKVRTLLGSELGLIDNNIFKFCWVVDFPYFVYDDKSKKIDFFHNPFSMPHGGLK 482

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
            L+  + L I A+QYDLVCNG E++SG IRN+  ++M +AF+  G +KE V  +FG L R
Sbjct: 483 DLEEKNPLDILAYQYDLVCNGIELSSGAIRNNKLDIMYKAFATAGYNKEEVNKKFGALVR 542

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G+PPHGGIA GIDRIVMLL  A N+RE++ FPM+Q   D+LM +PS V  + LREL
Sbjct: 543 AFRFGVPPHGGIAPGIDRIVMLLADAPNIREITCFPMNQQGEDVLMDAPSKVDNKHLREL 602

Query: 588 GLRIVE 593
            L++VE
Sbjct: 603 SLKVVE 608


>gi|89889509|ref|ZP_01201020.1| aspartyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89517782|gb|EAS20438.1| aspartyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 582

 Score =  591 bits (1524), Expect = e-166,   Method: Composition-based stats.
 Identities = 210/593 (35%), Positives = 337/593 (56%), Gaps = 15/593 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACF 59
            YR+H CG L  SDV   V L+GWV + R  G ++++D+RD YG+TQ++ +    D A  
Sbjct: 1   MYRSHDCGSLRASDVNKEVTLAGWVQKSRDKGFMVWVDLRDRYGVTQLIFDEERTDKALL 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A+ +  E+V+ + G V+ R  E+ NA + TG +E+  +++ ILS ++  P  +    +
Sbjct: 61  ERAQKLGREFVIQVKGTVIER--ESKNAKMSTGDVEILVKELTILSESKTPPFTIEDNTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR+ + +N++ R+++   +R  +  ++FIE  TP+L  S+PEGARD
Sbjct: 119 GGEELRMKYRYLDIRRNPVRENLIFRSKVAMEVRNFLAGKDFIEVETPVLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVEQ+D+LN  E++ R + ++  N +    NF R+ Y+DA+++YG DKPD+R  +  
Sbjct: 238 EMSFVEQEDVLNIFEDMTRHLLKKVKNID--VANFPRMTYEDAMKKYGNDKPDIRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +       +F++F++   V                 R   D++ +W R      L  +
Sbjct: 296 GELDAFAKAKDFKIFNEAELVVG-----IAVPGANSYTRKEIDKLIDWVRRPQVGALGMV 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R +E G       V K  +  +          + GD    ++G   K  +  +  R  
Sbjct: 351 YVRCNEDG--TYKSSVDKFYDQEDLANWAKATGAKAGDLICVLSGPANKTRTQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ LG+ +   F   W++DFP  EW+E+ ++    H+PFT P+         D  +++A
Sbjct: 409 MAERLGLRDPEVFAPLWVVDFPLLEWDEDTERYHAMHHPFTSPKPEDIDKLETDPGNVRA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G +R    ++    F ++G + +    +FG L  AF+ G PPH G+
Sbjct: 469 NAYDLVMNGNEIGGGSVRIFDKKLQALMFDHLGFTPDEARAQFGFLMDAFEYGAPPHAGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G DR+V +L G + +R+   FP + +  D+++ +PS +  EQL EL L++ 
Sbjct: 529 AFGFDRLVSILGGQETIRDFIAFPKNNSGRDVMIDAPSAIDQEQLTELNLKVT 581


>gi|97197015|sp|Q5GTS0|SYD_WOLTR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 600

 Score =  591 bits (1524), Expect = e-166,   Method: Composition-based stats.
 Identities = 292/606 (48%), Positives = 401/606 (66%), Gaps = 19/606 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+ Y+TH+C +L  +DV   V LSGW++R R HG +IF+D+RD YGITQ+V N D   F 
Sbjct: 1   MNYYKTHTCNELRKNDVEKEVTLSGWMYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFC 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP------- 113
               ++ E V+ + G+V +R+ +TIN +I TG+IE++   ++I S  E            
Sbjct: 61  KISDLKPESVITVTGIVKARTEDTINISISTGEIEVTVNNLQIESEVEFHHNEETAKEER 120

Query: 114 -----VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                +  ++EYPE++RFKYRFLDLRR+ +  NIV R++II  +R  MI + F+E  TPI
Sbjct: 121 SILASIADDQEYPENMRFKYRFLDLRREKVRNNIVLRSQIIAELRKFMIEQGFLEIQTPI 180

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D
Sbjct: 181 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMISGFDKYFQIAPCFRDEDARAD 240

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           R PGEFYQLD+EMSFV Q+D+   +E+ L  VF +FS   +V   F RI Y +A+ +YG+
Sbjct: 241 RSPGEFYQLDLEMSFVTQEDVFQVIESTLYKVFAKFS-RKSVDKGFSRITYKEAMLKYGS 299

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           DKPDLRNP+++ +VTE F  SEF +F   +           P K     R+F D+  E  
Sbjct: 300 DKPDLRNPLLISDVTEIFRDSEFNIFKSNIERGMVVRAIPAP-KTAEEPRSFFDKKIEHT 358

Query: 349 -RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407
            +  G  GL YI +  D        GP+AK L+      IR   +++ GDS FF +    
Sbjct: 359 QKEFGAKGLGYITFNKDG----TAKGPIAKFLDDNRLNHIREATNIKPGDSVFFASDKEN 414

Query: 408 KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
           +  + A   R  +  ELG+I+ N F+FCW++DFP++ ++++ KKIDF HNPF+MP GG++
Sbjct: 415 EAATIAGKVRTLLGSELGLIDNNIFKFCWVVDFPYFVYDDKSKKIDFFHNPFSMPHGGLK 474

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
            L+  + L I A+QYDLVCNG E++SG IRN+  ++M +AF+  G +KE V  +FG L R
Sbjct: 475 DLEEKNPLDILAYQYDLVCNGIELSSGAIRNNKLDIMYKAFATAGYNKEEVNKKFGALVR 534

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G+PPHGGIA GIDRIVMLL  A N+RE++ FPM+Q   D+LM +PS V  + LREL
Sbjct: 535 AFRFGVPPHGGIAPGIDRIVMLLADAPNIREITCFPMNQQGEDVLMDAPSKVDNKHLREL 594

Query: 588 GLRIVE 593
            L++VE
Sbjct: 595 SLKVVE 600


>gi|53713670|ref|YP_099662.1| aspartyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|62287541|sp|Q64TQ1|SYD_BACFR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|52216535|dbj|BAD49128.1| aspartyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 585

 Score =  591 bits (1524), Expect = e-166,   Method: Composition-based stats.
 Identities = 224/598 (37%), Positives = 335/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            +RTH+CG+L +SDV   V+LSGWV R R  GG+ F+D+RD YGITQ+V N   D+   E
Sbjct: 1   MFRTHTCGELRISDVNKQVKLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEIDAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ I G V  R ++  N++I TG IE+   ++ IL+ A   P  +    + 
Sbjct: 61  RANKLGREFVIQIVGTVNERFSK--NSHIPTGDIEIIVSELNILNSAITPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  +  N+  R ++   +R  +    F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRSAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D++ T E + + +F+   N   ++  F R+ + +A+R YG+DKPD+R  +   
Sbjct: 238 MSFVEQEDVITTFEGMAKHLFKVIRNIE-LTGPFPRMPWSEAMRLYGSDKPDIRFGMQFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     +              G  R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDILKGHGFSVFDNATYIGG-----ICAEGAAGYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  G V     V K       + ++     + GD    ++GD   K      + R
Sbjct: 352 A--RIEADGTVK--SSVDKFYIQEVLQQLKEAFGAKPGDLILILSGDDAMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   +  ++
Sbjct: 408 LEMGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTNPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RANAYDMVINGVEVGGGSIRIHDSQLQNKMFELLGFTPERAQEQFGFLMNAFKFGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +P+ +   QL EL L +    
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLEELNLIVDIKE 585


>gi|331002008|ref|ZP_08325528.1| aspartyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411804|gb|EGG91209.1| aspartyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 594

 Score =  591 bits (1524), Expect = e-166,   Method: Composition-based stats.
 Identities = 227/594 (38%), Positives = 344/594 (57%), Gaps = 11/594 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
            R+H C ++  +   S V + GWV + R  GGIIF D+RD  GI Q++   +      F 
Sbjct: 9   KRSHRCAEVVNATFESEVTVMGWVQKNRNKGGIIFCDLRDRSGILQIIFEEEECGSEVFN 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  ++ E+ + + G++  RS    N ++ TG++E+ A  + ILS +E  P  +  + + 
Sbjct: 69  KAMKLKQEFCIAVTGILKKRSG-AFNESLKTGELEVRATGLRILSESETPPFHIEEDSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLRR  L +N++ R+++  + R  +    F+E  TP L  SSPEGARD+
Sbjct: 128 KEELRLKYRFLDLRRPDLQRNLMVRSKVATTTRNFLAENGFLEIETPTLIKSSPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  GSFYALPQ+PQ +KQLLM SG+DRYFQ+A C+RDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVYPGSFYALPQSPQLFKQLLMVSGYDRYFQLARCYRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+L+  E +L+ +F++  + + VS    R+ + +A+ R+G+DKPDLR  + + 
Sbjct: 247 LSFVDVDDVLDVNERLLQRLFKDVLDID-VSLPIQRMTWQEAMDRFGSDKPDLRFGMELK 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+    +SEF VF   L+            + G   R   D + E+ +S    GLAY+ 
Sbjct: 306 DVSNVVANSEFAVFKNALASGGSVRGINATGQAG-MPRKKIDALVEFVKSYRAKGLAYMA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             ++  GN+      AK +     E ++  +D + GD  FF A             R  +
Sbjct: 365 --IEADGNIK--SSFAKFMTEAEIEGLKQAMDAKPGDMLFFAADSNKIVWDTLGALRVEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A +LG++  + ++F W+  FP  EW+EEE +    H+PFT P         +D   ++A 
Sbjct: 421 ASQLGLLKKDDYKFLWVTQFPLLEWSEEENRFKAMHHPFTAPMDEDWQYIDSDPGRVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H  +V  + F  +G+ KEV + RFG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGTEIGGGSVRIHQGDVQAKMFEVLGLIKEVAQERFGYLLEAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+VML++ A ++R+V  FP  ++  DL+  +P  V   QL+ELGL I E 
Sbjct: 541 YGLDRVVMLMVEADSIRDVIAFPKVKDASDLMTNAPDRVDDAQLKELGLIIKEE 594


>gi|298372345|ref|ZP_06982335.1| aspartate--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275249|gb|EFI16800.1| aspartate--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 583

 Score =  591 bits (1524), Expect = e-166,   Method: Composition-based stats.
 Identities = 229/596 (38%), Positives = 331/596 (55%), Gaps = 21/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RTH+ G+L ++D G  V L+GWV + R  GG+ F+D+RD YGITQ+V N D      E A
Sbjct: 3   RTHTNGELRLTDAGKTVTLTGWVQKNRKMGGMTFIDLRDRYGITQLVFNQDINPEICESA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +  E+V+   G V  RS +  N NI TG+IE+    + +L+ +   P  +  E +  +
Sbjct: 63  NRLGREYVIQATGTVAERSNK--NPNIPTGEIEIIVSSLRVLNPSAVPPFTIEDETDGGD 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR +YR+LDLRR+++  N+  R ++    R  + + +F+E  TP+L  S+PEGARDF+V
Sbjct: 121 DIRMQYRYLDLRRNSVRANLELRHKMAFETRRYLDSLHFLEVETPVLIKSTPEGARDFVV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 181 PSRMNPGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQ+DI+ T E +   +F+   N       F R+ + DA+R YG+DKPD R  +    +
Sbjct: 240 FVEQEDIIKTFEGLTVHLFKTIKNIELQP--FPRMSFADAMRYYGSDKPDTRFEMRFVEL 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWAR--SQGQPGLAYI 359
            +      F VF     +        I AKG     R   D + ++ R    G  GL Y 
Sbjct: 298 MDTLKGYGFSVFDDAEYIGG------ICAKGAASYTRKQLDELTDFVRRPQVGAKGLVYA 351

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADARN 418
             R++  GNV     V K       + ++ +   + GD    I+GD   K     ++ R 
Sbjct: 352 --RVEADGNVK--SSVDKFYTQDVLQKLKEKFAAEVGDLILIISGDNTSKAQKQLSELRL 407

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +   LG+ + N +   W++DFP  EW+EE  +    H+PFT P+     L  ++   ++
Sbjct: 408 EMGSRLGLRDKNKYSCLWVVDFPLLEWDEETNRYYAMHHPFTSPKPEDIPLLDSEPGKVR 467

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G IR H S +  + F  +G + E  E +FG L  AF+ G PPHGG
Sbjct: 468 ANAYDMVINGVEVGGGSIRIHDSGLQKKMFQVLGFTNEQAEYQFGFLTNAFKYGAPPHGG 527

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA G+DR V L  G  ++R+   FP +    D+++ +PS +   QL EL L IV+ 
Sbjct: 528 IAYGLDRFVSLFAGLDSIRDCIAFPKNNQGRDVMIDAPSIIDKTQLDELALSIVQK 583


>gi|42527095|ref|NP_972193.1| aspartyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|62287577|sp|Q73MC2|SYD_TREDE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|41817519|gb|AAS12104.1| aspartyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 590

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 241/596 (40%), Positives = 346/596 (58%), Gaps = 9/596 (1%)

Query: 1   MHRY-RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SA 57
           M +  RT +CG L     G  V L+GW+HR R HGGI FL++RD YG+TQVV + D    
Sbjct: 1   MEKMQRTVTCGGLNKDFAGKTVVLNGWIHRKRDHGGITFLNLRDRYGLTQVVVDDDASED 60

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
              +A S++ E+ + ++GLV  R    IN  + TG+IE+ A KIE+LS +E LP  +  +
Sbjct: 61  LKALAVSLKQEFCIAVEGLVRPRPDSMINKEMATGEIEVKALKIEVLSKSEVLPFQIDEK 120

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R KYR+LDLR   + ++I+ R++   ++R  + +++F+E  TP    S+PEGA
Sbjct: 121 TNANEDLRLKYRYLDLRSKAMQEHIMLRSKFTFAVREFLTSKDFLEIETPTFIKSTPEGA 180

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSR+  G FYALPQ+PQ YKQ+LM SGFD+YFQIA C+RDED R DR P EF Q+
Sbjct: 181 RDYLVPSRLYPGKFYALPQSPQIYKQILMVSGFDKYFQIARCYRDEDARGDRQP-EFTQI 239

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSF  ++D+L+  E +++  F++  N + +   F RI YD+AI  YGTDKPDLR  +
Sbjct: 240 DLEMSFASREDVLSLTEGMMQYAFKKSINVD-LPKTFERISYDEAIDIYGTDKPDLRFEM 298

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            M +         F VF   +S+    +   +  +    +R   + +   A+     GLA
Sbjct: 299 KMQDAAFMAEIGNFAVFKDAVSLGGAVKALVVKGQAEAYSRKKIEELEAAAKIYKAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +I       G     G V+K       E I  +L  + GD   F+A      C+     R
Sbjct: 359 WIKVT---EGGAKLEGGVSKFFEGKEAE-ICSKLGAEKGDLILFVADKYKIACTALGAVR 414

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           + + ++LG++N   F+F WI+DFP +EWNEEE K D AH+ F+ PQ    +    +   +
Sbjct: 415 SKLGKDLGLLNPAEFKFAWIVDFPLFEWNEEENKWDPAHHMFSAPQEKYIATMEENPEPV 474

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K   YDLV NG+E+ASG IR H  E+  + F  VG  +   E +FG L  AF+ G PPHG
Sbjct: 475 KGDLYDLVLNGYEVASGSIRIHNPELQKRIFKIVGFDESEAEKKFGFLTEAFKYGAPPHG 534

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIA G+DRIVM++ G  +++EV  FP +      +  SPS V  +QL EL L I E
Sbjct: 535 GIAPGLDRIVMIMAGETSIKEVIAFPKNSFAVSPMDDSPSEVDQKQLDELHLVIKE 590


>gi|224418231|ref|ZP_03656237.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827556|ref|ZP_04870441.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313141764|ref|ZP_07803957.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510962|gb|EES89621.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313130795|gb|EFR48412.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 583

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 235/596 (39%), Positives = 340/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H C  L   D+G  V L GW +  R HGGIIF+D+RD  GI Q+V +P       +IA
Sbjct: 2   RSHYCTGLDEKDIGKEVTLCGWCNTYRDHGGIIFIDLRDRSGIVQLVFDPKDSQQAHKIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL   G V  R     N  + TG+IE+   ++ I + +   P+ V G+    E
Sbjct: 62  SEVRDEYVLVAKGKVRKRGEGLENPKLKTGKIEVLIDELNIENKSLTPPIAV-GDESVGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   L +  + R+++  ++R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 DVRLKYRYLDLRNPRLQEIFITRSKVAQAVRNSLSHLGFLEIETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R DR P EF Q+D+EMS
Sbjct: 181 PSRVHHGEFYALPQSPQLFKQLLMVSGFDKYFQIAKCFRDEDLRLDRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++   E VL+ +F       ++   F    Y++ + +YG+DKPDLR  + +  V
Sbjct: 240 FCEQKDVIGVAEEVLKSIFAACG--ISIQMPFPHYTYNEVMEKYGSDKPDLRYELPLVEV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F+ S   +F+ I   +      A+  KGG    +R       E+ R  G  GLAY+ 
Sbjct: 298 GDLFIDSTNEIFATIAKDSKKNRFKALCVKGGDNFFSRKTLGEAEEFVRKFGAKGLAYLQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +          GP+ K +   N + +  R+    GD  FF AG       +    R  +
Sbjct: 358 IK-----EEGIKGPLVKFIKEENLKTLLDRVGASVGDIIFFGAGAKKVVWDYMGRLRQKV 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ++G+I+ + ++F W++DFP +E N++   I   H+PFTMP+     L+  D+  I + 
Sbjct: 413 ASDMGMIDESVYQFLWVVDFPMFERNDD-GSISALHHPFTMPKN----LEVQDIEEINSV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NGFEI  G IR H  E+  + F  +GIS++  +++F  L  A Q G PPHGGIA
Sbjct: 468 AYDVVLNGFEIGGGSIRIHKQEIQSKVFELLGISQKEAQDKFSFLLEALQFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DRI+MLL  A ++R+V  FP +Q     L  +PS  + EQLREL +++ E  K
Sbjct: 528 FGLDRIIMLLCKAHSIRDVIAFPKTQKATCPLTEAPSPANEEQLRELHIKVRETKK 583


>gi|260590987|ref|ZP_05856445.1| aspartate--tRNA ligase [Prevotella veroralis F0319]
 gi|260536852|gb|EEX19469.1| aspartate--tRNA ligase [Prevotella veroralis F0319]
          Length = 585

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 216/599 (36%), Positives = 335/599 (55%), Gaps = 20/599 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT++CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N   D++   
Sbjct: 1   MYRTNTCGELRLSDAGKEVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEADDASLCG 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + + G+V  R ++  N  I TG IE+ A+++ +LS +   P  +    + 
Sbjct: 61  EANKLGREYCIQVKGIVSERQSK--NNKIPTGDIEIIAKELNVLSPSLTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR+ + KN+  R R+   +R  + ++ F+E  TPIL  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRREAVRKNLELRHRMTILIRNFLDSQKFMEVETPILIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+  G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMTPGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++N  E + R +F E            ++ + +A++R+G+DKPDLR  +   
Sbjct: 238 MSFVDQDDVINLFEEMARHLFREIRGVELPKL--EQMTWHEAMKRFGSDKPDLRFGMEFV 295

Query: 301 NVTEHFVHSE-FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + +    +  F VF +   +                +R   + + ++ +    G  GL 
Sbjct: 296 ELIDELKGTGSFSVFDEAKYIGGIVV-----PGCADYSRKQLNELTDFVKRPQVGAHGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           +I +  D          + K       + ++     +DGD    ++GD   K        
Sbjct: 351 FIKYNTDG----TIKSSIDKFYTPEQLQKVKETTGAKDGDLVLILSGDNANKTRVQLCSL 406

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L       
Sbjct: 407 RLEMGDRLGLRDKNVFKCLWIIDFPLFEWSDEEQRLMATHHPFTMPNLDDIPLLDEHPEQ 466

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G +R H +++  + F  +G + E  E +FG L  AF+ G PPH
Sbjct: 467 VRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTPERAEAQFGFLMNAFKYGAPPH 526

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+A G+DR V +L G  ++R+   FP + +  D+++ +PS +  +QL EL L++    
Sbjct: 527 AGLAFGLDRFVSILAGLDSIRDCIAFPKNNSGRDVMLDAPSIIDQKQLDELELKLDVKE 585


>gi|311748783|ref|ZP_07722568.1| aspartate--tRNA ligase [Algoriphagus sp. PR1]
 gi|126577319|gb|EAZ81567.1| aspartate--tRNA ligase [Algoriphagus sp. PR1]
          Length = 584

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 229/593 (38%), Positives = 338/593 (56%), Gaps = 21/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61
           RTH+CG+L +  V   V LSGWV RVR  GG++++D+RD YGITQ++      D A  E 
Sbjct: 3   RTHTCGELRLDHVNQEVTLSGWVQRVRNKGGLVWVDLRDRYGITQLIFEEGSTDKALLEK 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E+V+   G V+ R+++  N  I TG IE+ A  +++L+ A+  P  +  + +  
Sbjct: 63  AAELGREFVVQATGTVIERTSK--NDKIPTGSIEIKATDLQVLNAAKVPPFIIEDDTDGG 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR+ + + +  R R++   R  M AE+F+E  TP+L  S+PEGARDF+
Sbjct: 121 EELRMKYRYLDLRRNVVREKLHLRHRMMQETRKYMDAEHFMEVETPVLIKSTPEGARDFV 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 181 VPSRVNPGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +FVEQ+DIL+T E + + +F              R+ Y DA++ YG DKPDLR  +    
Sbjct: 240 AFVEQEDILSTFEGLTKHLFANVKGVELEEV--KRMTYADAMKYYGNDKPDLRFDMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWAR--SQGQPGLAY 358
           + E      F +F     V        I AKG     R   D + +W +    G  G+ Y
Sbjct: 298 LNELAQGKGFGIFDNAELV------VGICAKGAAEYTRKQLDAITDWVKRPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
             +  D          V K  +  + +A     + + GD    ++GD  K     ++ R 
Sbjct: 352 AKYNADG----TIKSTVDKFYSQEDLQAWASAFEAEPGDLMLILSGDANKVRKQLSELRL 407

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++LG+ + N F+  W++DFP  EW+EE ++    H+PFT P+     L  +D  +++
Sbjct: 408 KMGEDLGLRDRNVFKPLWVVDFPLLEWDEETERYHAMHHPFTSPKKEDIPLLDSDPGAVR 467

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG EI  G IR H        F ++G + E  + +FG L  AF+ G PPHGG
Sbjct: 468 ANAYDLVINGVEIGGGSIRIHDRATQQLMFKHLGFTDEEAQKQFGFLMEAFEYGAPPHGG 527

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IA G DR+  +  G+ ++R+   FP + +  D+++ SPS+++ EQL EL +++
Sbjct: 528 IAFGFDRLCAIFGGSDSIRDYIAFPKNNSGRDVMIDSPSSIAPEQLGELSIQL 580


>gi|306826463|ref|ZP_07459774.1| aspartate--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304431322|gb|EFM34320.1| aspartate--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 582

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 223/595 (37%), Positives = 344/595 (57%), Gaps = 17/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G+ + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++ 
Sbjct: 1   MKRSMYAGRVREEHIGTTITLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEEVSSDVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +RSE+V+ ++G V +R     N  + TG +EL    + IL+ A+  P  +  + E
Sbjct: 61  ATAERLRSEYVIEVEGFVEARQ--QANDKLATGMVELKVSALTILNTAKTTPFEIKDDVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + +N   R ++ +S+R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDDTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V +E    + V+  F R+ YD A+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDIVEGMIAKVMKETKEID-VTLPFPRMSYDVAMNSYGSDKPDTRFEMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T      +F+VFS      P  +   +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTVTVKGIDFKVFSDA----PAVKAIVVKGNADRYSRKDIDKLAEFAKQFGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                  G  +  GPVAK L  + TE +  +L + + D   F+A       +     RN 
Sbjct: 353 KVT---DGQFS--GPVAKFLTAIETE-LSSQLKLAENDLVLFVADTLEVANNTLGALRNR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA++L +I+ + F F W++D+P +EW+EEE +   AH+PFT+P          +L+ ++A
Sbjct: 407 IAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGNLVKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  E+  + F  +G + +   ++FG L  A   G PPHGG+
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKEMQERMFKALGFTADEANDQFGFLLEAMDYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR VMLL    N+REV  FP +    D +  +PS VS  QL EL L+I  +
Sbjct: 527 AIGLDRFVMLLAEKDNIREVIAFPKNNKASDPMTQAPSLVSENQLEELSLQIESH 581


>gi|227890123|ref|ZP_04007928.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849298|gb|EEJ59384.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 617

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 217/610 (35%), Positives = 348/610 (57%), Gaps = 11/610 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N D      EI
Sbjct: 6   KRTDYAGNITSKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGEKLMEI 65

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+ +E V+ + G V+ RS  ++N  + TG++E+ A +I++L+ ++  P  +  +    
Sbjct: 66  ADSLNNEDVIEVKGKVVKRS--SVNPEMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAA 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR TL + I+ R++I+ ++      + FI+  TPIL  SSPEGARD+L
Sbjct: 124 EQTRLKYRYLDLRRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME 
Sbjct: 184 VPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMET 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+++  + +  E +L+ + ++  N + +     RI +D+A+ +YG+DKPD R  + +H+
Sbjct: 243 SFLDEQGVQDYTEGLLKKIMKDVMNID-LKTPIKRITWDEAMNKYGSDKPDTRYEMYLHD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++  F  S+F+VFS  ++     +  A+       +R   +   ++ +     GLA++ +
Sbjct: 302 LSPIFKDSDFKVFSGAIADGGVVKGIAVKNGAKEYSRKKIEEKQDYIKRYNAKGLAWVKY 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E G  +  GP+A+ L   N EA++   D++ G+    +A             R   A
Sbjct: 362 ---EDGEFS--GPIARFLTDENKEALKKEFDLEGGELIVIVADKWKVVTDSLDHLRREFA 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E GII    F+F W++D+P +E++E   +   AH+PFTMP      L   D     A  
Sbjct: 417 HETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHARS 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G+A 
Sbjct: 477 YDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGLAI 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKI 601
           G+DR+ M+L G  N+R+V+ FP + +  + +M +P+ V+ +QL ++G+ + +  +  +K 
Sbjct: 537 GLDRLAMMLAGKDNIRDVTAFPKNASASEPMMHAPAPVADKQLTDIGIEVEKQYEDSVKE 596

Query: 602 SVTTILRNVY 611
           +   + +   
Sbjct: 597 TEQRLEKEAQ 606


>gi|315604270|ref|ZP_07879336.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313976|gb|EFU62027.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 601

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 234/606 (38%), Positives = 335/606 (55%), Gaps = 31/606 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G LG   +G  V L+GWV R R HGG+ F+D+RD  GI QVV   +     +A  
Sbjct: 3   RTHNIGTLGTDLIGQTVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVVRDER----VAHE 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----FGEREY 120
           +RSE+VL + G V +R     N ++ TG IE+    IEI + +  LP  V          
Sbjct: 59  LRSEFVLKVTGEVAARPEGNENPHLATGAIEVMGDDIEIFNTSAPLPFQVSSNAEDSGNV 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLRR+     I  R+++  + R  + A +F+E  TP LT S+PEGARDF
Sbjct: 119 GEETRLKYRYLDLRREPEQYAIRLRSKVSRAAREALYARDFVEIETPTLTRSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R++ GS+YALPQ+PQ +KQLLM +G +RYFQIA C+RDED R+DR P EF QLD+E
Sbjct: 179 IVPARLSPGSWYALPQSPQLFKQLLMVAGMERYFQIARCYRDEDFRADRQP-EFTQLDIE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD++   E+VL+ V+        ++    R+ Y DA+ R+G+DKPDLR  + + 
Sbjct: 238 MSFVEQDDVIEVAEDVLKNVWALIG--YDLATPIPRMTYRDAMERFGSDKPDLRFGLELT 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +T++F  + FRVF         Y    +   GG   R   D+  EWA+++G  GLAY+ 
Sbjct: 296 ELTDYFKDTPFRVFQAP------YVGAVVMPGGGSQPRRTFDKWQEWAKARGAKGLAYVT 349

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               E G +   GPVAK+++    E +      + GD  FF AG P         AR  I
Sbjct: 350 IA--EDGTLG--GPVAKNISESEREGLVEATGAEPGDCIFFAAGKPTPSRELLGAARLEI 405

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWN---EEEKK-------IDFAHNPFTMPQGGMESLK 470
            +   +I+ + + F W++D P ++     E E             H+ FT P+       
Sbjct: 406 GKRCDLIDPDAWAFTWVVDAPLFKPTGDAEAEGDVALGHSAWTAVHHAFTSPKPEWMDSF 465

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D     A+ YD+VCNG EI  G IR H  +V  + F  +GI +E  + +FG L  AF+
Sbjct: 466 DRDPAHALAYAYDIVCNGNEIGGGSIRIHRRDVQNRVFDVMGIGEEEAQAQFGFLLDAFK 525

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGG+A G DRIV LL  ++++R+V  FP S    D L  +P+ ++  Q +E G+ 
Sbjct: 526 FGAPPHGGVAFGWDRIVSLLTKSESIRDVIAFPKSGGGFDPLTEAPAPITPAQRKEAGVD 585

Query: 591 IVENPK 596
                +
Sbjct: 586 ATPRKR 591


>gi|327403473|ref|YP_004344311.1| aspartyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327318981|gb|AEA43473.1| aspartyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 585

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 206/596 (34%), Positives = 327/596 (54%), Gaps = 18/596 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACF-- 59
            YR+H+ G+L  S +G  V L+GWV   R     ++F+D+RD YGITQ+    DS     
Sbjct: 1   MYRSHTNGELRASHIGQEVTLAGWVQANRKISANLLFVDLRDRYGITQLNFTDDSTSDVE 60

Query: 60  ----EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                 A  +  E+V+ + G V+ RS++  N NI TG+IE+   ++ +L+ A+  P  + 
Sbjct: 61  NSLISRASKLGREFVIQVKGTVIERSSK--NDNIPTGEIEIKVSELLVLNAAKTPPFTIE 118

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
            + +  E +R +YR+LDLRR+ + + +  R  +    R  + ++ F++  TP L  S+PE
Sbjct: 119 DDTDGGEELRAQYRYLDLRRNPVQQKLRLRNHVALETRKFLDSKGFLDVETPYLIKSTPE 178

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARDF+VPSR+NQG FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF 
Sbjct: 179 GARDFVVPSRMNQGEFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFT 237

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           Q+D EM+FVEQ+DILN  E +++ +F+          +F R+ Y +A+ +YG+DKPD+R 
Sbjct: 238 QIDCEMAFVEQEDILNMFEGLIKHLFQTVRGITF-EGDFPRMTYAEAMEKYGSDKPDIRF 296

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
            +   ++        F +F    +V     +           R   D + +W +      
Sbjct: 297 GMEFTDLKTLSAGKGFSIFDNAEAV-----IGIAVPGASEYTRKQLDEITDWVKRPQIGA 351

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L  I+ + +  G       V K  +    +        + GD  F ++G+  K      +
Sbjct: 352 LGLIYVKCNADGTFK--SSVDKFYDEAALKTWAEASGAKAGDLIFVLSGELDKTRKQMNE 409

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  +  ELG+   + F+  W++DFP  EW+E   +    H+PFT P+    SL   +  
Sbjct: 410 LRLRMGTELGLRKPDDFKPLWVLDFPLLEWDENSGRYHAMHHPFTSPKPEDFSLIDTEPG 469

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            ++A  YDL  NG E+  G IR H   +  + F  +G + E  + +FG L  AF+ G PP
Sbjct: 470 KVRANAYDLAMNGVELGGGSIRIHDRALQSRMFELLGFTPEQAQEQFGFLLNAFEYGAPP 529

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG+A G+DR+V  + G+ ++R+   FP + +  D+++ +PS +   QL+ELG+++
Sbjct: 530 HGGLAFGLDRLVATMGGSDSIRDYIAFPKNNSGRDVMIDAPSVIDEAQLKELGIKL 585


>gi|58337236|ref|YP_193821.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227903820|ref|ZP_04021625.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|81311475|sp|Q5FKI4|SYD_LACAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|58254553|gb|AAV42790.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227868707|gb|EEJ76128.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 614

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 225/606 (37%), Positives = 347/606 (57%), Gaps = 12/606 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--AC 58
           M + RT  CG++    +G  V L GWV RVR  G ++F+D+RD  G+ Q+V N DS    
Sbjct: 1   MEK-RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKDL 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA S+ +E+V+ + G V+ RS    N ++ TGQ+E+ A +I IL+ A+  P  +    
Sbjct: 60  MEIANSLGNEYVIQVRGKVVKRSEA--NPDMKTGQVEVDATEIIILNEAKNPPFEIKDGV 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  E  R KYR+LDLRR  + K I+ R++I+ +         FI+  TPIL  SSPEGAR
Sbjct: 118 EISEQTRLKYRYLDLRRPEVQKAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+D
Sbjct: 178 DYLVPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQID 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF ++  I +  E +L+ + ++    + +     R+ + D++ +YG DKPD R  ++
Sbjct: 237 MEMSFADEQTIQDYTEGLLKKIMKDVMGID-LKTPIKRMSWTDSMNKYGCDKPDTRYGML 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +H+++  F  S+F+VFS  ++     +  A+       +R   D+  ++ +     GLA+
Sbjct: 296 IHDLSSIFKDSDFKVFSGAIADGGFVKGIAVKNGAKEYSRKKIDKKADFIKRFHAKGLAW 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           + +   E G  +  GPVA+ L   N EA++   D++ G+   F+A      C      R 
Sbjct: 356 VKF---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFVADKWKVVCDSLDHLRR 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
             A+E GII    ++F W++D+P +E++E   +   AH+PFTMP      L   D     
Sbjct: 411 EFAKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTDPHKAH 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G IR H   +    F  +G +K+    +FG L  AF  G PPH G
Sbjct: 471 ARSYDIVMNGDEMGGGSIRIHKRSIQEDMFKALGFTKKRAYEQFGYLMDAFDMGFPPHAG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +A G+DR  M+L G  N+R+V  FP + +  + +M +P+ V+ +QL +LG+ + +  +  
Sbjct: 531 LAIGLDRFAMMLAGKDNIRDVLAFPKNASASEPMMHAPAPVADQQLADLGIEVEKQYEDS 590

Query: 599 LKISVT 604
           +K +  
Sbjct: 591 VKATEE 596


>gi|304389435|ref|ZP_07371398.1| aspartate--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304327245|gb|EFL94480.1| aspartate--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 599

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 233/602 (38%), Positives = 337/602 (55%), Gaps = 31/602 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH C +L ++  G  V L GWV R R HGG+ F+D+RD  GI Q+V + +         
Sbjct: 3   RTHKCAELNLNHDGQTVTLCGWVDRRRDHGGVAFMDLRDASGIVQLVVSEEVVR-----E 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE---YP 121
           VR+E+VL + G V  R     N +I TG+IE+ A  +EIL+    LP  V    E     
Sbjct: 58  VRNEYVLKVTGKVRKRPEGNENPDIATGEIEVMADDVEILNSCATLPFQVSEHAEDSKVG 117

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR +YRF+DLRR  LH N+V R+RI    R  M    F+E  TP LT S+PEGARDF+
Sbjct: 118 EDIRLRYRFVDLRRRQLHDNLVLRSRISQIARRVMEEHEFLEIETPTLTRSTPEGARDFV 177

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLLM  G +RYFQ+A C+RDED R+DR P EF QLDMEM
Sbjct: 178 VPARIRPGSWYALPQSPQLFKQLLMVGGMERYFQLARCYRDEDSRADRQP-EFTQLDMEM 236

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E++L+ +++       ++    R+ + +A+ R+G+DKPDLR    + +
Sbjct: 237 SFVDQDDVIEVTEHLLKEIWKVIG--YDLTTPIPRMPFQEAMDRFGSDKPDLRFGYELVD 294

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+ F  + F++F         Y    +   GG   R   D+  EWA+++G  GLAY+  
Sbjct: 295 LTDFFKDTPFKIFQAP------YVGAVVMPGGGSQPRRTFDKWQEWAKARGAKGLAYVTL 348

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             DE G     GPVAK+++      +      Q GD  FF AGD     +    AR  I 
Sbjct: 349 --DEKGEAG--GPVAKNISDAEKVGLAAATGAQPGDCIFFAAGDKTASQTLLGAARLEIG 404

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGMESLKG 471
           +   +I+   + F W++D P ++ + E +               H+ FT P+        
Sbjct: 405 RRCNLIDEKAWAFTWVVDAPLFKPSGEAEAEGDVALGHSAWTAVHHAFTSPKPECLDTFD 464

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D  S  A+ YD+VCNG E+  G IR H  ++  + F  +G S+E  + RFG L  AF+ 
Sbjct: 465 TDPGSALAYAYDIVCNGVELGGGSIRIHRRDIQERVFKVMGFSQEEAQARFGFLLDAFKY 524

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G DRI  +L G+ ++R+V  FP + +  D L G+P+ ++ EQ +E G+  
Sbjct: 525 GAPPHGGLALGWDRIAGMLTGSPSIRDVIAFPKAGDGLDPLTGAPAPITDEQRKETGVDY 584

Query: 592 VE 593
           V 
Sbjct: 585 VP 586


>gi|88801547|ref|ZP_01117075.1| aspartyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88782205|gb|EAR13382.1| aspartyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 584

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 223/592 (37%), Positives = 335/592 (56%), Gaps = 15/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACF 59
            YR+HSCGDL  S + + V L+GWV + R  G ++++D+RD YGITQ++ +         
Sbjct: 1   MYRSHSCGDLRTSHINTEVTLAGWVQKSRDKGFMVWVDLRDRYGITQLIFDTARTPIEMM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E AKS+  E+V+ + G V+ R  E+ N+ + TG +EL   K+EIL+ +   P  +  + +
Sbjct: 61  EKAKSLGREFVIQVTGTVIER--ESKNSKMATGDVELLVSKLEILNASITPPFTIEDKTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR KYR+LD+RR+ + ++++ R ++   +R  +  + FIE  TP L  S+PEGARD
Sbjct: 119 GGEDIRMKYRYLDIRRNPVKESLIFRHKVAMEVRKYLSDQEFIEVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DIL   E + R + +E +N       F R+ YDDA+R YG DKPD+R  +  
Sbjct: 238 EMAFVEQEDILKVFEGLTRHLLKEVNNVEVAE--FPRMLYDDAMRLYGNDKPDIRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +     H EF VF+    V            G    R   D++ EW +      L  I
Sbjct: 296 GELNTVTQHKEFSVFNTAELVVG-----IAVPGGNSYTRKEIDKLIEWVKRPQVGALGMI 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R++E G  +    V K  +  +          + GD    ++GD  K  +  +  R  
Sbjct: 351 YCRVNEDG--SFKSSVDKFYDQEDFAKWAEITGAKSGDLICMLSGDIRKVRAQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A  LG+ +   F   W++DFP  E +EE       H+PFT P+ G   L   D  ++KA
Sbjct: 409 LAVRLGLRDSKVFAPLWVVDFPLLELDEETGHYHAMHHPFTSPKPGQMELLDTDPGAVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H  ++      ++G S    + +FG L  AF+ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKQMQATMLRHLGFSDADAKAQFGFLMDAFEYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+V +L G + +R+   FP + +  D+++ +P+ ++  QL+EL L++
Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAFIADTQLKELSLKL 580


>gi|42519261|ref|NP_965191.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|41583549|gb|AAS09157.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 617

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 217/610 (35%), Positives = 348/610 (57%), Gaps = 11/610 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N D      EI
Sbjct: 6   KRTDYAGNITSKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGEKLMEI 65

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+ +E V+ + G V+ RS  ++N  + TG++E+ A +I++L+ ++  P  +  +    
Sbjct: 66  ADSLNNEDVIEVKGKVVKRS--SVNPEMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAA 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR TL + I+ R++I+ ++      + FI+  TPIL  SSPEGARD+L
Sbjct: 124 EQTRLKYRYLDLRRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME 
Sbjct: 184 VPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMET 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+++  + +  E +L+ + ++  N + +     RI +D+A+ +YG+DKPD R  + +H+
Sbjct: 243 SFLDEQGVQDYTEGLLKKIMKDVMNID-LKTPIKRITWDEAMNKYGSDKPDTRYEMYLHD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++  F  S+F+VFS  ++     +  A+       +R   +   ++ +     GLA++ +
Sbjct: 302 LSPIFKDSDFKVFSGAIADGGVVKGIAVKNGAKEYSRKKIEEKQDYIKRYNAKGLAWVKY 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E G  +  GP+A+ L   N EA++   D++ G+    +A             R   A
Sbjct: 362 ---EDGEFS--GPIARFLTDENKEALKKEFDLEGGELIVIVADKWKVVTDSLDHLRREFA 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E GII    F+F W++D+P +E++E   +   AH+PFTMP      L   D     A  
Sbjct: 417 HETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHARS 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G+A 
Sbjct: 477 YDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGLAI 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKI 601
           G+DR+ M+L G  N+R+V+ FP + +  + +M +P+ V+ +QL ++G+ + +  +  +K 
Sbjct: 537 GLDRLAMMLAGKDNIRDVTAFPKNASASEPMMHAPAPVADQQLADIGIEVEKQYEDSVKE 596

Query: 602 SVTTILRNVY 611
           +   + +   
Sbjct: 597 TEQRLEKEAQ 606


>gi|269956474|ref|YP_003326263.1| aspartyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269305155|gb|ACZ30705.1| aspartyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 600

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 236/612 (38%), Positives = 326/612 (53%), Gaps = 31/612 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G L    +G  V L+GWV R R HGG+ F+D+RD  GI QVV   +S    +A  
Sbjct: 3   RTHTAGSLRAEHIGQTVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVIRDES----VAHP 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----FGEREY 120
           +R+E+VL + G V +R     N N+ TG+IE+ A  +  L+ +  LP  V          
Sbjct: 59  LRAEFVLQVVGEVAARPEGNANPNLATGEIEVIATSVTTLNESAPLPFQVSTALADTEVI 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R  +R+LDLRR      +  R +   + R  + AE+F+E  TP LT S+PEGARDF
Sbjct: 119 GEEARLAHRYLDLRRPVSQHAMRLRAKANQAARRVLDAEDFVEVETPTLTRSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 179 LVPARLAPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD++   E +L  ++E      T+     R+ + DA+R YG+DKPDLR    + 
Sbjct: 238 MSFVEQDDVIALAERILVALWELIG--VTIPTPIPRMTFADAMRLYGSDKPDLRFGNPLV 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +TE+F  + FRVF         Y    + A G    R   D   EWA+ +G  GLAY+ 
Sbjct: 296 ELTEYFTDTPFRVFQA------EYVGAVVMAGGASQPRRQFDAWQEWAKQRGAKGLAYVT 349

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E G +   GPVAK+L+      +      Q GD+ FF AG   +  +    AR  I
Sbjct: 350 FA--EDGTLG--GPVAKNLSDAERAGLAAATGAQPGDAVFFAAGKTDEARALLGAARIEI 405

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLK 470
           A++ G I+ + + F W++D P ++   E                 H+ FT P        
Sbjct: 406 AKKTGAIDEDAWAFVWVVDAPLFKPTGEAVSEGDVALGHSAWTAVHHAFTSPHPEWIDRF 465

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
                   A+ YD+VCNG EI  G IR H  +V  + F  +GI     + +FG L  AF 
Sbjct: 466 EQHPGEALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFDVMGIGAAEAQEKFGFLLDAFA 525

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DRIV LL  A ++R+V  FP S    D L  +P+ ++ EQ +E G+ 
Sbjct: 526 FGAPPHGGIAFGWDRIVALLTKAPSIRDVIAFPKSGGGFDPLTQAPAPITPEQRKEAGVD 585

Query: 591 IVENPKKILKIS 602
                K   K  
Sbjct: 586 AKPADKNAPKAD 597


>gi|212693293|ref|ZP_03301421.1| hypothetical protein BACDOR_02804 [Bacteroides dorei DSM 17855]
 gi|237710036|ref|ZP_04540517.1| aspartyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|237725303|ref|ZP_04555784.1| aspartyl-tRNA synthetase [Bacteroides sp. D4]
 gi|265753684|ref|ZP_06089039.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212664171|gb|EEB24743.1| hypothetical protein BACDOR_02804 [Bacteroides dorei DSM 17855]
 gi|229435990|gb|EEO46067.1| aspartyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|229456129|gb|EEO61850.1| aspartyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263235398|gb|EEZ20922.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 587

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 228/600 (38%), Positives = 343/600 (57%), Gaps = 18/600 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            +R+H+CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N        E
Sbjct: 1   MFRSHTCGELRLSDAGKSVTLAGWVQRARKMGGMTFVDLRDRYGITQLVFNEAVNAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ I G V  RS +  N NI TG+IE+   ++ +L+ A   P  +    + 
Sbjct: 61  RANHLGREFVIQITGEVNERSNK--NMNIPTGEIEIIVSELNVLNSAVTPPFTIEDNSDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR K+R+LDLRR+ + KN+  R R+   +R  + ++ F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKFRYLDLRRNCVRKNLELRHRMTMEVRRYLDSKGFLEVETPMLVGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI++T E + + +F+E      +S  FLR+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDIISTFEGMAKHLFKELRGVE-LSEPFLRMTWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAY 358
            + +      F VF     +                 R   D++ E+ +    G  G+ Y
Sbjct: 297 ELMDIMKGHGFSVFDDAAYIGG-----ICAEGAASYTRKQLDQLTEFVKRPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADAR 417
              R++  GNV     V K  +    + ++     + GD    ++G D +K      + R
Sbjct: 352 A--RVEADGNVK--SSVDKFYSQEVLQQMKEAFGAKPGDLILILSGPDAMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + ++LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  ++
Sbjct: 408 LEVGRQLGLRDKNEFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVVNGVEVGGGSIRIHDSQLQAKMFEILGFTPERAQEQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+A G+DR V L  G  ++R+   FP + +  D+++ +P+ +   QL EL L +    +K
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDQSQLDELNLVVDIKEEK 587


>gi|15609709|ref|NP_217088.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|148662411|ref|YP_001283934.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148823767|ref|YP_001288521.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167968818|ref|ZP_02551095.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215404520|ref|ZP_03416701.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215412344|ref|ZP_03421104.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215427972|ref|ZP_03425891.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215431528|ref|ZP_03429447.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|215446821|ref|ZP_03433573.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|218754309|ref|ZP_03533105.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219558574|ref|ZP_03537650.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|253798347|ref|YP_003031348.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 1435]
 gi|254232691|ref|ZP_04926018.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis C]
 gi|254551623|ref|ZP_05142070.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|289553638|ref|ZP_06442848.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 605]
 gi|289570742|ref|ZP_06450969.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T17]
 gi|289746364|ref|ZP_06505742.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis 02_1987]
 gi|289751195|ref|ZP_06510573.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T92]
 gi|289754690|ref|ZP_06514068.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis EAS054]
 gi|289758702|ref|ZP_06518080.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T85]
 gi|289762743|ref|ZP_06522121.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis GM 1503]
 gi|294994318|ref|ZP_06800009.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297635182|ref|ZP_06952962.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297732174|ref|ZP_06961292.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298526045|ref|ZP_07013454.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis
           94_M4241A]
 gi|306776845|ref|ZP_07415182.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu001]
 gi|306780609|ref|ZP_07418946.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu002]
 gi|306785373|ref|ZP_07423695.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu003]
 gi|306789973|ref|ZP_07428295.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu004]
 gi|306794053|ref|ZP_07432355.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu005]
 gi|306798451|ref|ZP_07436753.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu006]
 gi|306804331|ref|ZP_07440999.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu008]
 gi|306807630|ref|ZP_07444298.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu007]
 gi|306969831|ref|ZP_07482492.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu009]
 gi|306972960|ref|ZP_07485621.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu010]
 gi|307080671|ref|ZP_07489841.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu011]
 gi|307085258|ref|ZP_07494371.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu012]
 gi|313659508|ref|ZP_07816388.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|1478240|emb|CAB01271.1| PROBABLE ASPARTYL-TRNA SYNTHETASE ASPS (ASPARTATE--TRNA LIGASE)
           (ASPRS) (ASPARTIC ACID TRANSLASE) [Mycobacterium
           tuberculosis H37Rv]
 gi|124601750|gb|EAY60760.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis C]
 gi|148506563|gb|ABQ74372.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148722294|gb|ABR06919.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis F11]
 gi|253319850|gb|ACT24453.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 1435]
 gi|289438270|gb|EFD20763.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 605]
 gi|289544496|gb|EFD48144.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T17]
 gi|289686892|gb|EFD54380.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis 02_1987]
 gi|289691782|gb|EFD59211.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T92]
 gi|289695277|gb|EFD62706.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis EAS054]
 gi|289710249|gb|EFD74265.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis GM 1503]
 gi|289714266|gb|EFD78278.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T85]
 gi|298495839|gb|EFI31133.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis
           94_M4241A]
 gi|308214773|gb|EFO74172.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu001]
 gi|308326544|gb|EFP15395.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu002]
 gi|308329966|gb|EFP18817.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu003]
 gi|308333583|gb|EFP22434.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu004]
 gi|308337610|gb|EFP26461.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu005]
 gi|308341275|gb|EFP30126.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu006]
 gi|308345951|gb|EFP34802.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu007]
 gi|308349083|gb|EFP37934.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu008]
 gi|308352640|gb|EFP41491.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu009]
 gi|308357651|gb|EFP46502.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu010]
 gi|308361593|gb|EFP50444.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu011]
 gi|308365212|gb|EFP54063.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu012]
 gi|323718845|gb|EGB28001.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis CDC1551A]
 gi|326904186|gb|EGE51119.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis W-148]
 gi|328458117|gb|AEB03540.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 4207]
          Length = 596

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 235/613 (38%), Positives = 333/613 (54%), Gaps = 29/613 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M   R+H+ G L   D G  V L+GWV R R HGG+IF+D+RD  GI QVV     D+  
Sbjct: 1   MFVLRSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEV 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
              A  +R+E+ + + G+V  R     N  I TG+IE++A  + +L       LP   + 
Sbjct: 61  LAQAHRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLGECAP--LPFQLDE 118

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R KYR+LDLRRD     I  R+R+  + R  +   +F+E  TP +T S+PEGAR
Sbjct: 119 PAGEELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGAR 178

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD
Sbjct: 179 DFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLD 237

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSFV+ +DI+   E VL  ++        +     RI Y +A+RR+GTDKPDLR  + 
Sbjct: 238 MEMSFVDAEDIIAISEEVLTELWALIG--YRIPTPIPRIGYAEAMRRFGTDKPDLRFGLE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +   T+ F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAY
Sbjct: 296 LVECTDFFSDTTFRVFQAP------YVGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAY 349

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +   + E G +   GPVAK+L       +   +  + GD  FF AG      +    AR 
Sbjct: 350 VL--VAEDGTLG--GPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARV 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMES 468
            IA  LG+I+ + + F W++D P +E  +E                 H+ FT P+   E 
Sbjct: 406 EIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWED 465

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              +D  S+ A  YD+VCNG EI  G +R H  ++  + F+ +G+ K   E +FG L  A
Sbjct: 466 RIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEAEEKFGFLLEA 525

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           F  G PPHGGIA G DR   LL G  ++REV  FP +    D L  +P+ ++ +Q +E G
Sbjct: 526 FMFGAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESG 585

Query: 589 LRIVENPKKILKI 601
           +     PK++ + 
Sbjct: 586 ID--AQPKRVQQA 596


>gi|260187586|ref|ZP_05765060.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|289448221|ref|ZP_06437965.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis CPHL_A]
 gi|289421179|gb|EFD18380.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis CPHL_A]
          Length = 596

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 235/613 (38%), Positives = 333/613 (54%), Gaps = 29/613 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M   R+H+ G L   D G  V L+GWV R R HGG+IF+D+RD  GI QVV     D+  
Sbjct: 1   MFVLRSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEV 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
              A  +R+E+ + + G+V  R     N  I TG+IE++A  + +L       LP   + 
Sbjct: 61  LAQAHRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLGECAP--LPFQLDE 118

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R KYR+LDLRRD     I  R+R+  + R  +   +F+E  TP +T S+PEGAR
Sbjct: 119 PAGEELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGAR 178

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD
Sbjct: 179 DFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLD 237

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSFV+ +DI+   E VL  ++        +     RI Y +A+RR+GTDKPDLR  + 
Sbjct: 238 MEMSFVDAEDIIAISEEVLTELWALIG--YRIPTPIPRIGYAEAMRRFGTDKPDLRFGLE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +   T+ F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAY
Sbjct: 296 LVECTDFFSDTTFRVFQAP------YVGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAY 349

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +   + E G +   GPVAK+L       +   +  + GD  FF AG      +    AR 
Sbjct: 350 VL--VAEDGTLG--GPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARV 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMES 468
            IA  LG+I+ + + F W++D P +E  +E                 H+ FT P+   E 
Sbjct: 406 EIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVASGAWTAVHHAFTAPKPEWED 465

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              +D  S+ A  YD+VCNG EI  G +R H  ++  + F+ +G+ K   E +FG L  A
Sbjct: 466 RIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEAEEKFGFLLEA 525

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           F  G PPHGGIA G DR   LL G  ++REV  FP +    D L  +P+ ++ +Q +E G
Sbjct: 526 FMFGAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESG 585

Query: 589 LRIVENPKKILKI 601
           +     PK++ + 
Sbjct: 586 ID--AQPKRVQQA 596


>gi|37521497|ref|NP_924874.1| aspartyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|46577177|sp|Q7NJA4|SYD_GLOVI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|35212494|dbj|BAC89869.1| aspartyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 595

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 233/599 (38%), Positives = 344/599 (57%), Gaps = 15/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+  CG L    +G  V L GW+   R HGG+IFLD+RD+ GI Q+VA+P      + +A
Sbjct: 2   RSDYCGTLRSEHIGKTVSLYGWIDGWRDHGGVIFLDLRDYTGIVQIVADPQRTPESYHLA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+R+E+V+ ++G V +R   ++N  + TG +E+ A  + +L+ AE  P  +  + E  E
Sbjct: 62  SSLRNEYVVRVEGRVSARPEHSLNPRLSTGTVEVYADTLAVLNRAETPPFAISKDEEVDE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R K+R+LDLRR  + K +  R R++  MR  +    F E  TP+L  S+PEGARD+LV
Sbjct: 122 KLRLKFRYLDLRRGRMQKLLRLRHRVMQIMRRHLDERGFTEIETPVLVKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRVN G ++ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF QLDMEMS
Sbjct: 182 PSRVNPGDWFALPQSPQLFKQLLMVAGFDRYYQIARCFRDEDLRADRQP-EFTQLDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++I+   E ++  + +E      +S    R+ Y +A+ RYG+DKPD R  + +  V
Sbjct: 241 FLSMEEIIALNEGLVAAILQETMGLE-LSLPLPRLTYAEAMVRYGSDKPDTRFGLELVEV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR--AFCDRMNEWARSQGQPGLAYIF 360
           +E F  S F+V S  ++         +P   G  N        + E+    G  GL  +F
Sbjct: 300 SEVFRESSFQVLSGAVAAGGKVVCLPVPGAEGITNTRVKPGGDLFEFVTQFGARGL--LF 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL---KFCSFAADAR 417
            R+ E G V  +G  +K L       +  +   Q G    F AGD         +    R
Sbjct: 358 ARVREGGQVDTIGAFSKSLTPEIAAGMIEKTGAQPGHLLLFGAGDRTAVPTVLDYMGRLR 417

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + +ELG+I+ N     W+ DFP +EWN EEK+++  H+PFT P+   E     DL + 
Sbjct: 418 LKMGEELGLIDPNRHNLLWVTDFPMFEWNAEEKRLEALHHPFTAPRPEDEH----DLKTA 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD++ NG E+  G +R +   +  + F  +G+++E    +FG L  AF+ G PPHG
Sbjct: 474 RALAYDIIWNGVEVGGGSLRIYRRALQERVFETIGLTEEEARAKFGFLLDAFEYGTPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GIA G DR VML+ G +++REV  FP +Q   DL++G+PS V+  QL+EL +R    PK
Sbjct: 534 GIAYGFDRFVMLIAGEQSIREVIAFPKTQRAQDLMLGAPSAVAERQLKELNVRSTLPPK 592


>gi|268319358|ref|YP_003293014.1| hypothetical protein FI9785_875 [Lactobacillus johnsonii FI9785]
 gi|262397733|emb|CAX66747.1| aspS [Lactobacillus johnsonii FI9785]
          Length = 617

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 217/610 (35%), Positives = 348/610 (57%), Gaps = 11/610 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N D      EI
Sbjct: 6   KRTDYAGNITSKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGEKLMEI 65

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+ +E V+ + G V+ RS  ++N  + TG++E+ A +I++L+ ++  P  +  +    
Sbjct: 66  ADSLNNEDVIEVKGKVVKRS--SVNPEMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAA 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR TL + I+ R++I+ ++      + FI+  TPIL  SSPEGARD+L
Sbjct: 124 EQTRLKYRYLDLRRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME 
Sbjct: 184 VPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMET 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+++  + +  E +L+ + ++  N + +     RI +D+A+ +YG+DKPD R  + +H+
Sbjct: 243 SFLDEQGVQDYTEGLLKKIMKDVMNID-LKTPIKRITWDEAMNKYGSDKPDTRYEMYLHD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++  F  S+F+VFS  ++     +  A+       +R   +   ++ +     GLA++ +
Sbjct: 302 LSPIFKDSDFKVFSGAIADGGVVKGIAVKNGAKEYSRKKIEEKQDYIKRYNAKGLAWVKY 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E G  +  GP+A+ L   N EA++   D++ G+    +A             R   A
Sbjct: 362 ---EDGEFS--GPIARFLTDENKEALKKEFDLEGGELIVIVADKWKVVTDSLDHLRREFA 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E GII    F+F W++D+P +E++E   +   AH+PFTMP      L   D     A  
Sbjct: 417 HETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHARS 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G+A 
Sbjct: 477 YDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGLAI 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKI 601
           G+DR+ M+L G  N+R+V+ FP + +  + +M +P+ V+ +QL ++G+ + +  +  +K 
Sbjct: 537 GLDRLAMMLAGKDNIRDVTAFPKNASASEPMMHAPAPVADKQLTDIGIEVEKQYEDSVKE 596

Query: 602 SVTTILRNVY 611
           +   + +   
Sbjct: 597 TEQRLEKEAQ 606


>gi|225677284|ref|ZP_03788266.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225590676|gb|EEH11921.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 600

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 290/606 (47%), Positives = 401/606 (66%), Gaps = 19/606 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+  +TH+C +L  +DV   V LSGW++R R HG +IF+D+RD YGITQ+V N D   F+
Sbjct: 1   MNCCKTHTCNELRKNDVEKEVTLSGWLYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF----- 115
              +++ E V+ + G+V +R+ +T+N++I TG+IE+    + + S  E            
Sbjct: 61  EISNLKLESVITVTGIVEARTEDTVNSSISTGEIEVIVNNLRVESEVEFHFDEEIAKEER 120

Query: 116 -------GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                  GE+EYPE++RFKYRFLDLRR+ +  NI+ R++II  +R  MI   F+E  TPI
Sbjct: 121 SILASITGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIIAELRKLMIERGFLEIQTPI 180

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D
Sbjct: 181 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARAD 240

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           R PGEFYQLD+EMSFV Q+DI + +E+ L  VF +FS   +V  +F RI Y +A+ +YG+
Sbjct: 241 RSPGEFYQLDLEMSFVTQEDIFDVIESALYKVFAKFS-RKSVDKDFPRITYKEAMLKYGS 299

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           DKPDLRNP+++ +VTE F  S F +F   +           P K     R+F D+  E A
Sbjct: 300 DKPDLRNPLLISDVTEIFRDSGFNIFKSNIERGMVVRAIPAP-KTAEEPRSFFDKKIEHA 358

Query: 349 -RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407
            +  G  GL YI +      +    GP+AK L+      IR   +++ GDS FF +    
Sbjct: 359 QKEFGAKGLGYITF----DKDGTAKGPIAKFLDENRLNHIREATNIEPGDSVFFASDKEN 414

Query: 408 KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
           +  + A   R  +  EL +I+ N F+FCWI+DFP++ ++++ KKIDF HNPF+MP GG++
Sbjct: 415 EAANIAGKVRTLLGSELSLIDDNIFKFCWIIDFPYFVYDDKSKKIDFFHNPFSMPHGGLK 474

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
            L+  + L I A+QYDLVCNG E++SG IRN+  ++M +AF+  G SKE V+ +FG L R
Sbjct: 475 DLEEKNPLDILAYQYDLVCNGIELSSGAIRNNKLDIMYKAFAIAGYSKEEVDTKFGALVR 534

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G+PPHGGIA G+DRIVMLL    N+REV  FPM+Q   D+LMG+PS V  + LREL
Sbjct: 535 AFRFGVPPHGGIAPGVDRIVMLLADEPNIREVICFPMNQQGEDVLMGAPSKVEDKHLREL 594

Query: 588 GLRIVE 593
            L+++E
Sbjct: 595 SLKVIE 600


>gi|210134820|ref|YP_002301259.1| aspartyl-tRNA synthetase [Helicobacter pylori P12]
 gi|238064681|sp|B6JLK1|SYD_HELP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|210132788|gb|ACJ07779.1| aspartyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 577

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 222/591 (37%), Positives = 344/591 (58%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G V  R A   N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGRVRLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKSVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+     +T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQEIFKAIG--HTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFIDSSNAIFSNIAKDPKNQRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILEKTGAKIGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+     ++  D+  ++A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKN----IECEDIEEVEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTNAPSPINEEQLRELHIRLRK 577


>gi|302535469|ref|ZP_07287811.1| aspartyl-tRNA synthetase [Streptomyces sp. C]
 gi|302444364|gb|EFL16180.1| aspartyl-tRNA synthetase [Streptomyces sp. C]
          Length = 610

 Score =  590 bits (1521), Expect = e-166,   Method: Composition-based stats.
 Identities = 295/594 (49%), Positives = 399/594 (67%), Gaps = 10/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +A  +
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAAAD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +   +  E V+ +DG V+SR  E +N ++ TG+IE+ A ++E+L  A  LP  +  +   
Sbjct: 61  VLDKLSKETVVRVDGKVVSRGTENVNPDLPTGEIEIEAAEVEVLGAAAPLPFTINTDDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +F EF  G  V++ F RI + +++ +YG DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFTEFGGGRPVTSPFPRIPFRESMLKYGNDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F  SEF+ F+            A+P       R F D + E+A S G  GLA++ 
Sbjct: 301 DITDVFEGSEFKAFA-----GKHVRALAVPDT-AAQPRKFFDGLGEYAISLGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G++   GP+AK L   N + +  RL +  G + FF AG+  +        R   
Sbjct: 354 -RVGEDGSLT--GPIAKFLTEENVKVLTERLGLAAGHAVFFGAGEFDEVSKIMGPVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G    N F FCWI+DFP YE +EE  KIDF+HNPF+MPQGGM+ L+  D L I A+
Sbjct: 411 AKRAGQFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMKDLEEKDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  EVML+AF   G   E VE  F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGIELSSGAIRNHEPEVMLKAFEIAGYEAETVEREFAGMLRAFRLGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL + + + 
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTVLEESRLRELNIALRKP 584


>gi|260205893|ref|ZP_05773384.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289575280|ref|ZP_06455507.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis K85]
 gi|289539711|gb|EFD44289.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis K85]
          Length = 596

 Score =  590 bits (1521), Expect = e-166,   Method: Composition-based stats.
 Identities = 236/613 (38%), Positives = 334/613 (54%), Gaps = 29/613 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M   R+H+ G L   D G  V L+GWV R R HGG+IF+D+RD  GI QVV     D+  
Sbjct: 1   MFVLRSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEV 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
              A  +R+E+ + + G+V  R     N  I TG+IE++A  + +L       LP   + 
Sbjct: 61  LAQAHRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLGECAP--LPFQLDE 118

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R KYR+LDLRRD     I  R+R+  + R  +   +F+E  TP +T S+PEGAR
Sbjct: 119 PAGEELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGAR 178

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD
Sbjct: 179 DFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLD 237

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSFV+ +DI+   E VL  ++        +     RI Y +A+RR+GTDKPDLR  + 
Sbjct: 238 MEMSFVDAEDIIAISEEVLTELWALIG--YRIPTPIPRIGYAEAMRRFGTDKPDLRFGLE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +   T+ F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAY
Sbjct: 296 LVECTDFFSDTTFRVFQAP------YVGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAY 349

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +   + E G +   GPVAK+L       +   +  + GD  FF AG      +    AR 
Sbjct: 350 VL--VAEDGTLG--GPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARV 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMES 468
            IA  LG+I+ + + F W++D P +E  +E                 H+ FT P+   E 
Sbjct: 406 EIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWED 465

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              +D  S+ A  YD+VCNG EI  G +R H  ++  + F+ +G+ K  VE +FG L  A
Sbjct: 466 RIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEVEEKFGFLLEA 525

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           F  G PPHGGIA G DR   LL G  ++REV  FP +    D L  +P+ ++ +Q +E G
Sbjct: 526 FMFGAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESG 585

Query: 589 LRIVENPKKILKI 601
           +     PK++ + 
Sbjct: 586 ID--AQPKRVQQA 596


>gi|182414291|ref|YP_001819357.1| aspartyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|238692909|sp|B1ZSW8|SYD_OPITP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|177841505|gb|ACB75757.1| aspartyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 595

 Score =  590 bits (1521), Expect = e-166,   Method: Composition-based stats.
 Identities = 227/606 (37%), Positives = 338/606 (55%), Gaps = 22/606 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-- 58
           MH  RTH C  L  S +G+ V L GWV  +R  GGIIF+D+RD  GITQ+   P      
Sbjct: 1   MH--RTHHCAQLTTSQLGATVSLLGWVDTIRDQGGIIFVDLRDRKGITQIQLEPHENAKL 58

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E  K ++ E V+ I G V+ R A T N  + TG++E+ A  +EI ++++  P P+    
Sbjct: 59  AEQVKQLKPESVIGITGKVVRRPAGTENPALPTGEVEVVASSLEIHNISDTPPFPLDDAG 118

Query: 119 --EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             +  E +R  YR+LDLRR  + KN+  R R   S+R    A+ FIE  TP L  S+PEG
Sbjct: 119 GDKVNEDLRLTYRYLDLRRPKMRKNLQVRHRAAKSIRDYFDAQEFIEVETPALFKSTPEG 178

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR++LVPSR++ G FYAL Q+PQQ+KQ+LM +G ++YFQIA CFRDED R+DR   EF Q
Sbjct: 179 AREYLVPSRIHPGQFYALSQSPQQFKQILMVAGVEKYFQIARCFRDEDLRADRQ-MEFTQ 237

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +D+E SFV ++DI    E +L+ V+++  + +     F R+ + DA+ RYG DKPD+R  
Sbjct: 238 VDVEASFVTREDIYALFEGMLKKVWKDVLDVDI-PTPFPRMAFHDAMNRYGVDKPDVRFA 296

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWARSQGQPG 355
           + + + +E F +S F+VF   ++     +  A+ AKG     +     M + A+S G  G
Sbjct: 297 LELADFSELFKNSAFKVFQSTVAGGGVVK--ALNAKGLADLTQGELKSMEDTAKSLGAKG 354

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LA+I     E        P+ K         +  RL++++GD  FF A    K C+    
Sbjct: 355 LAFIKVEGGE-----WKSPIVKFFTEPEKAELTKRLNIEEGDIIFFAAAPWEKACAILGR 409

Query: 416 ARNHIA----QELGI-INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
            R   A    +   + I  + ++F W++DFP   ++E E +    H+PFT P        
Sbjct: 410 LRLESAAFLQKRGKLTIRHDDWQFLWVIDFPLMTYDEAENRYVATHHPFTAPVPDDTQYL 469

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV-VENRFGGLYRAF 529
            +D   ++   YD+V NG E+  G IR H   +  + F +V    +  VE+RFG + +AF
Sbjct: 470 DSDPKKVRGQHYDVVLNGMELGGGSIRIHQPVLQKKVFEDVLKIPQDVVESRFGYMLKAF 529

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
             G PPHGGIA G+DR+V LL G  ++R+V  FP +Q   DL+  SP+ V+  QL++L +
Sbjct: 530 TYGAPPHGGIAFGLDRMVALLCGTTSIRDVIAFPKTQKGQDLMAQSPTPVTPRQLKDLHI 589

Query: 590 RIVENP 595
           + V   
Sbjct: 590 QTVMPE 595


>gi|256847120|ref|ZP_05552566.1| aspartyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715784|gb|EEU30759.1| aspartyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 590

 Score =  590 bits (1521), Expect = e-166,   Method: Composition-based stats.
 Identities = 218/598 (36%), Positives = 333/598 (55%), Gaps = 14/598 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
             RT+  G    S +G  V L GWV + R  GG+IF+D+RD  GI Q+V +   D A F+
Sbjct: 1   MKRTNYAGRTNESQIGEEVVLKGWVAKRRNLGGLIFIDLRDREGIVQLVFDEKQDPAAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A   RSE++L + GLV  R+   IN ++ TG+IE+  ++  IL+ ++  P  V    + 
Sbjct: 61  VANECRSEYILEVRGLVRERAE--INPDLPTGKIEVEVKEANILAKSQTPPFEVKDNVDA 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YR++DLRR  + KN+  R+++ + +       +F++  TP LT S+PEGARDF
Sbjct: 119 SEDLRLQYRYIDLRRPEMMKNMKLRSKVASIIHNYYDNNDFMDVETPDLTRSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+  G FYALPQ+PQ +KQLLMA+G DRY+Q+A CFRDED R DR P EF Q+D E
Sbjct: 179 LVPSRLYPGHFYALPQSPQLFKQLLMAAGVDRYYQMARCFRDEDLRGDRQP-EFTQVDTE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF   +DI +  E +++ V +E  N + V   F R+ + +A+ RYG+DKPD R  +++ 
Sbjct: 238 MSFATAEDIQDMTEGLIKRVMKEALNVD-VKTPFPRMEWQEAMDRYGSDKPDTRFGMLIT 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++    S F+VFS  ++         +P      +R    +  ++ +  G  GLA++ 
Sbjct: 297 DLSDIVKDSSFKVFSGTVADGKFVRAICVPGGADHYSRKDITKKEDYIKRYGAKGLAWVK 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GP+AK +N +    I  RL  ++GD   F+A             R  I
Sbjct: 357 VTAD-----GYNGPIAKFINDL-AAPINERLGAKEGDLILFVADSFHVVADSLGYLREKI 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A E+ +I    + + W++++P +E++E   K   AH+PFTM             D     
Sbjct: 411 AHEMDMIKPGQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAH 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD++ NG EI  G IR H  ++  + F  +G +KE    RF  L +  + GMPP GG
Sbjct: 471 AQSYDIILNGNEIGGGSIRIHDPKIQEKVFKALGYTKEEARARFNFLIKGLENGMPPEGG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +A G DR VMLL GA N+R+V  FP +    + +  +P TV  EQL EL + + ++ +
Sbjct: 531 LAFGFDRWVMLLAGADNIRDVIPFPKNSKGIEPMTAAPGTVDQEQLDELHIDVKDDSE 588


>gi|332296202|ref|YP_004438125.1| aspartyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332179305|gb|AEE14994.1| aspartyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 590

 Score =  590 bits (1521), Expect = e-166,   Method: Composition-based stats.
 Identities = 229/596 (38%), Positives = 346/596 (58%), Gaps = 11/596 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIA 62
           YRTH+  ++  S     + + GWV++ R HG +IFLDIRD Y + QVV +  +   F  A
Sbjct: 3   YRTHTLKEINRSLENKTITVCGWVNKRRDHGNLIFLDIRDRYSLLQVVVDSENKETFRKA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYP 121
           + +RSE+VL I G +  R   T N  I TG+ EL A  I IL+ ++  P  +  E ++Y 
Sbjct: 63  EEIRSEYVLQITGELRKRPLGTENTKISTGEFELVASNINILNRSKVPPFSISDEQKDYD 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +  KYR+LDLRR    +NI+KR  I N++R   +  +F+E  TP LT S+PEGARDFL
Sbjct: 123 EKLGLKYRYLDLRRTDKKENIIKRHLITNTIRNHFLENDFLEIETPYLTKSTPEGARDFL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G+FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 183 VPSRLQPGTFYALPQSPQLFKQILMVSGFDRYFQIVRCFRDEDLRADRQP-EFTQVDVEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE +D++   E + + +      G        RI Y +A+ +YGTD+PDLRNP+ + +
Sbjct: 242 SFVEPNDVMTITEELFKKL--NVQFGIECDYPIKRISYTEAMNKYGTDRPDLRNPLEILD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE    ++ ++F  ++  +   + + +  K     R   +++N  A+  G PG+A+I +
Sbjct: 300 FTEILKDTKLKIFRSVIEKDGYIKGFILKNKECHPTRPTLEKINNMAKDFGLPGIAWILF 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                       P+AK L+     + +   D+ D D+    AG            R  + 
Sbjct: 360 -----DGSEVRSPIAKFLSENEISSFKKTFDLGDKDAILLAAGK-DGLLEALGSLRLFLG 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++N + F++ W++DFP +E++E+EK+++  H+PFT P          D LS+++  
Sbjct: 414 NEFNLVNESEFKYLWVVDFPLFEYDEKEKRLNSVHHPFTAPHPEDLEKLDTDPLSVRSLA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR + + +  + F  + IS E  + +FG L  A + G PPHGGIA 
Sbjct: 474 YDIVLNGNELGGGSIRINNTNLQSKIFKLLDISPEEAQIKFGFLLEALEYGAPPHGGIAL 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DRI ML  GAK++R+V  FP +Q+   LL  +PS V  +QL EL + +    ++
Sbjct: 534 GLDRITMLFTGAKSLRDVIAFPKTQSGTCLLTDAPSQVDRKQLDELSISVNIKEEQ 589


>gi|269126362|ref|YP_003299732.1| aspartyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268311320|gb|ACY97694.1| aspartyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 585

 Score =  590 bits (1521), Expect = e-166,   Method: Composition-based stats.
 Identities = 232/594 (39%), Positives = 334/594 (56%), Gaps = 20/594 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+ F+D+RD  G+ QVV   +    + A  
Sbjct: 3   RTHGAGVLRKEHAGERVVLAGWVARRRDHGGVTFIDLRDASGVVQVVFREE----DTAHD 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + I G V  R A   N ++ TG+IE++A  IE+LS A  LP P+ G+    E +
Sbjct: 59  LRAEYCVKITGEVRVRPAGNENPDLPTGEIEVAATDIEVLSEAAPLPFPIEGDVNVNEEV 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LD+RR+ + + +  R++    +   M    F+   TP LT S+PEGARDFLVP 
Sbjct: 119 RLKYRYLDIRRERVARALRIRSQAAYLVNEVMREHGFVNVETPTLTRSTPEGARDFLVPV 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF Q+D+EMSFV
Sbjct: 179 RLQPGHWYALPQSPQLFKQLLMVSGLERYYQIARCYRDEDFRADRQP-EFTQIDIEMSFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           E +D++   E ++  +++E      V     R+ Y DA+ RYG+DKPDLR    + ++T 
Sbjct: 238 EAEDVMAIGEELVARLWKEIVGYE-VPRPIPRLAYADAMARYGSDKPDLRFGNELVDMTA 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   EWARS+G  GLAY+  + D
Sbjct: 297 YFSATPFRVFQAP------YVGAVVMPGGASQTRKELDAWQEWARSRGARGLAYVLVQPD 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
                   GPVAK+++      +      + GD+ FF AG P         AR  I +  
Sbjct: 351 G----TLTGPVAKNISDAERAGLAKAAGAKPGDAIFFAAGQPHASRELLGAARLEIGRRC 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----KKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           G+I+ + + F WI+D P +E   ++          H+PFT P+    +       +  A 
Sbjct: 407 GLIDESAWSFVWIVDPPIFEPECDDSGAQTGWTSVHHPFTAPKPEYAATFHEQPETALAD 466

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLVCNG EI  G IR H +E+  + F  +G++KE  E +FG L  AF+ G PPHGGIA
Sbjct: 467 AYDLVCNGMEIGGGSIRIHRAEMQQRVFDVLGLNKEEAEAKFGFLLEAFKYGPPPHGGIA 526

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G DR VMLL G +++R+V  FP + +  D L G+P+ ++ +Q +E G+ +   
Sbjct: 527 FGWDRTVMLLAGGESIRDVIAFPKAASGYDPLTGAPTGITEQQRKEAGVDVRPE 580


>gi|15842110|ref|NP_337147.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|18278903|sp|Q50649|SYD_MYCTU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|13882393|gb|AAK46961.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
          Length = 594

 Score =  590 bits (1521), Expect = e-166,   Method: Composition-based stats.
 Identities = 234/609 (38%), Positives = 332/609 (54%), Gaps = 29/609 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           R+H+ G L   D G  V L+GWV R R HGG+IF+D+RD  GI QVV     D+     A
Sbjct: 3   RSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEVLAQA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+E+ + + G+V  R     N  I TG+IE++A  + +L       LP   +    E
Sbjct: 63  HRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLGECAP--LPFQLDEPAGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRRD     I  R+R+  + R  +   +F+E  TP +T S+PEGARDFLV
Sbjct: 121 ELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGARDFLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMS
Sbjct: 181 PARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +DI+   E VL  ++        +     RI Y +A+RR+GTDKPDLR  + +   
Sbjct: 240 FVDAEDIIAISEEVLTELWALIG--YRIPTPIPRIGYAEAMRRFGTDKPDLRFGLELVEC 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+ F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAY+   
Sbjct: 298 TDFFSDTTFRVFQAP------YVGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAYVL-- 349

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G +   GPVAK+L       +   +  + GD  FF AG      +    AR  IA 
Sbjct: 350 VAEDGTLG--GPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARVEIAN 407

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGN 472
            LG+I+ + + F W++D P +E  +E                 H+ FT P+   E    +
Sbjct: 408 RLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWEDRIES 467

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D  S+ A  YD+VCNG EI  G +R H  ++  + F+ +G+ K   E +FG L  AF  G
Sbjct: 468 DTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEAEEKFGFLLEAFMFG 527

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G DR   LL G  ++REV  FP +    D L  +P+ ++ +Q +E G+   
Sbjct: 528 APPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESGID-- 585

Query: 593 ENPKKILKI 601
             PK++ + 
Sbjct: 586 AQPKRVQQA 594


>gi|153951485|ref|YP_001398402.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166225335|sp|A7H4H2|SYD_CAMJD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|152938931|gb|ABS43672.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 583

 Score =  590 bits (1520), Expect = e-166,   Method: Composition-based stats.
 Identities = 241/596 (40%), Positives = 344/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H   DLG+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+      EIA
Sbjct: 2   RSHYNIDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            + R+E+VL  +G +  R    +N  + TG+IE+   K+ I + +   P  +  E    E
Sbjct: 62  SNARNEFVLIAEGTIRPRGEGLVNPKLKTGEIEVVVSKLTIENESIVPPFAIADES-VNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F E+ D++N  E  L+ +F+       +   F ++ Y DA+  YG+DKPDLR  +   +V
Sbjct: 240 FCEKKDVINVAETFLKDIFKACGKE--IQTPFRQMQYKDAMENYGSDKPDLRFDLKFIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAEGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   +  R  ++ GD  FF AG       +    R  +
Sbjct: 358 VKED-----GLKGPLCKFFSEEDLNELSKRCKLEVGDVVFFGAGAKKTVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ N  EF W++DFP +E N++       H+PFTMP+   E    NDL  I + 
Sbjct: 413 ANELNLIDPNALEFLWVVDFPMFEQNDD-GSYSAMHHPFTMPKNIDE----NDLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 528 IGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTEAPSPASNEAMRELGIKLRENIK 583


>gi|86149910|ref|ZP_01068139.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85839728|gb|EAQ56988.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
          Length = 583

 Score =  590 bits (1520), Expect = e-166,   Method: Composition-based stats.
 Identities = 240/596 (40%), Positives = 342/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H   DLG+S VG  V+L GW +  R HGG+IF+D+RD  GI Q+V +P+      EIA
Sbjct: 2   RSHYNTDLGISHVGQSVKLCGWANSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            + R+E+VL  +G +  R    IN  + TG+IE+   K+ I + +  +P     +    E
Sbjct: 62  SNARNEFVLIAEGTIRPRGEGLINPKLKTGEIEVVVSKLTIENES-AVPPFAIADESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++N  E   + +F+       +   F ++ Y DA+  YG+DKPDLR  +   +V
Sbjct: 240 FCEQKDVINVAETFFKDIFKACGKE--IQTPFRQMQYKDAMENYGSDKPDLRFDLKFIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        + AI    G    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   +  R +++ GD  FF AG       +    R  +
Sbjct: 358 VKED-----GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +I+ N  EF W++DFP +E N++       H+PFTMP+   E     DL  I + 
Sbjct: 413 ANELKLIDPNTLEFLWVVDFPMFEQNDD-GSYSAMHHPFTMPKNIDE----TDLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+ GA N+REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 528 IGLDRLIMLVTGANNIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 583


>gi|313888446|ref|ZP_07822113.1| aspartate--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845475|gb|EFR32869.1| aspartate--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 591

 Score =  590 bits (1520), Expect = e-166,   Method: Composition-based stats.
 Identities = 213/595 (35%), Positives = 338/595 (56%), Gaps = 12/595 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACF 59
           +  RT+ C ++    +   V L GWV + R  G I+F+D+RD  GI Q+V +        
Sbjct: 7   NLKRTNYCNEISEDMISKEVVLMGWVAKQRSLGSIVFVDLRDRSGIAQIVFDDTSSEELL 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +R E+V+ + G V  RS  +IN  + TG++E+ A +++ILS +E  P+ V     
Sbjct: 67  EKASHLRGEFVIAVKGAVRMRS--SINEELETGRVEVLASELKILSESEVPPIYVKDNDN 124

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E++R KYR LDLR+ ++ +N++ R++I    R       FIE  TP+LT  +PEGARD
Sbjct: 125 VAENMRLKYRTLDLRKPSMQRNLMIRSKIYKITRDFFYENGFIEVETPMLTKPTPEGARD 184

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN G FYALPQ+PQ  KQLLM +G DRY QI  CFRDED R++R P EF Q+DM
Sbjct: 185 YLVPSRVNPGEFYALPQSPQLMKQLLMVAGMDRYIQITKCFRDEDLRANRQP-EFTQIDM 243

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E+SFV+++D++   E  L+ +F+E  N +       R+ Y +A+ R+G DKPDLR  + +
Sbjct: 244 ELSFVDEEDVMGINERFLQKLFKEVINKDI-ELPIKRMKYSEAMDRFGVDKPDLRFGMEL 302

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +++E      F+VF              +       ++    ++  + +     GL++I
Sbjct: 303 KDISEIVKTCGFKVFEGNTEKGKSVRGIKVDGGSEFYSKKQVKKLESFVKDYKAMGLSWI 362

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                   +     P+AK L+    + I    + + GD    +A       S   + RN 
Sbjct: 363 RV------DEEIDSPIAKFLSEETMQEIISAFEAKKGDLILILADKNSVVFSGLGNLRNK 416

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+++ +I+ + ++  WI +FP +E++EEE +    H+PFT P         +D  + +A
Sbjct: 417 IARDMDLIDEDDYKLVWITEFPLFEYDEEEGRYVAMHHPFTSPLDEDVDKLVSDKENARA 476

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR +  EV  + F  +G+S+E  + +FG L  AF+ G PPHGG+
Sbjct: 477 KAYDIVINGDEMGGGSIRINDPEVQEKMFEALGLSEEEAKEKFGFLLEAFKYGAPPHGGL 536

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           A G+DR+VML  GAK++R+V  FP +Q    LL G+P+ ++ +QL E+ ++++E+
Sbjct: 537 AYGLDRLVMLFTGAKSIRDVIAFPKTQAATCLLTGAPTGLTEKQLEEVHIKVIED 591


>gi|108563023|ref|YP_627339.1| aspartyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123246989|sp|Q1CTQ7|SYD_HELPH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|107836796|gb|ABF84665.1| aspartyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 577

 Score =  590 bits (1520), Expect = e-166,   Method: Composition-based stats.
 Identities = 222/591 (37%), Positives = 342/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G V  R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGRVRLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+     +T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQAIFKAVG--HTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F  S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFRDSSNAIFSNIAKDPKNKRIKALNVKGADAVFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  +   Q GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILEKTGAQTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+     ++  D+  ++A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKN----IECEDIEEVEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSHSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|146299008|ref|YP_001193599.1| aspartyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|189082098|sp|A5FKJ2|SYD_FLAJO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146153426|gb|ABQ04280.1| aspartyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 583

 Score =  590 bits (1520), Expect = e-166,   Method: Composition-based stats.
 Identities = 220/594 (37%), Positives = 330/594 (55%), Gaps = 19/594 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACF 59
            YR+H+CG+L  S++ + V L+GWV + R  G + ++D+RD YGITQ++ +    D   F
Sbjct: 1   MYRSHNCGELNASNINTEVTLAGWVQKSRDKGFMNWVDLRDRYGITQLIFDESRTDKTVF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+AK++  E+V+ + G V+ R A+  N NI TG+IE+   ++ IL+ A   P  +  E +
Sbjct: 61  ELAKTLGREFVIQVKGTVIEREAK--NKNIPTGEIEILVSELTILNTALTPPFTIEDETD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR KYR+LD+RR+ +  +++ R ++   +R  +   +F E  TP L  S+PEGARD
Sbjct: 119 GGEDIRMKYRYLDIRRNPVKNSLLFRHKVAMEVRKYLSDLDFCEVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DILN  E + R + +E          F RI YD A++ YG DKPD+R  +  
Sbjct: 238 EMAFVEQEDILNVFEGLTRHLLKEIKGIEVDK--FPRITYDYAMKTYGNDKPDIRFGMKF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             + E   H EF VF+    V             G   R   D + +W +    G  G+ 
Sbjct: 296 GELNEFAQHKEFPVFNAAELVVG-----IAVPGAGNYTRKEIDGLIDWVKRPQVGASGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+    D          V K  +  +        +   GD  F ++G   K  +  +  R
Sbjct: 351 YVKCNEDG----TYKSSVDKFYDNDDLAKWAKATEANPGDMIFVLSGPANKTRAQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A  LG+ N   F   W++DFP  E +EE  +    H+PFT P+    +L   +   +
Sbjct: 407 MELATRLGLRNPEEFAPLWVVDFPLLELDEESGRYHAMHHPFTSPKPEDMALLETEPGKV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG EI  G IR H        F  +G ++E  + +FG L  AFQ G PPHG
Sbjct: 467 RANAYDMVLNGNEIGGGSIRIHDKATQQLMFKYLGFTEEEAKAQFGFLMDAFQFGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR+V +L G + +R+   FP + +  D+++ +P+ +   QL+EL ++I
Sbjct: 527 GLAFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAAIDDAQLKELHIKI 580


>gi|227872750|ref|ZP_03991073.1| aspartate--tRNA ligase [Oribacterium sinus F0268]
 gi|227841411|gb|EEJ51718.1| aspartate--tRNA ligase [Oribacterium sinus F0268]
          Length = 597

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 222/597 (37%), Positives = 340/597 (56%), Gaps = 14/597 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
           +RT  CG+LG   +G  V + GWV + R  GG+IF D+RD  GI Q++   +      FE
Sbjct: 9   HRTARCGELGEEYIGKTVCMMGWVQKSRNKGGLIFTDLRDRSGILQILFEENECGAEVFE 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +R+E+V+ ++G + SR  +  NA++ TG +EL A+ + IL+ AE  P P+  + + 
Sbjct: 69  KASKLRAEFVIAVEGELRSR-GKDANASLATGAVELVAKSLRILAEAETPPFPIEEDSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  L K I+ R R+   +R  +  E F+E  TP L  S+PEGARDF
Sbjct: 128 KEDLRLKYRYLDLRRPDLAKRIMTRARLSQLIRAFLSREGFLEIETPTLIKSTPEGARDF 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++QGSFYALPQ+PQ  KQLLM SG DRYFQ+A C+RDED R+DR P EF Q+DME
Sbjct: 188 LVPSRLHQGSFYALPQSPQLLKQLLMVSGMDRYFQLARCYRDEDLRADRQP-EFTQVDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ +D+L   E +L+ +F+E    +  S    R+ + DA+  YG+DKPDLR  + + 
Sbjct: 247 LSFVDMEDVLEVNERLLQYIFKEICQVDI-SLPLQRMTWIDAMENYGSDKPDLRFDLPLL 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
             TE      F VFS+ +      +   +  +     R   D   E  +     GLA+  
Sbjct: 306 ECTEAVRGCGFSVFSQCVENGGKVKGILLKGQ-ASMPRKKIDSYVELVKGYQAKGLAWFG 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADARNH 419
           +  D     +     AK ++  + + +     ++ GD  F ++ +      +     R  
Sbjct: 365 YAEDG----SVKSSFAKFMSEEDVKRLTEATGLEQGDLLFLVSDEKKQVVWNSLGALRLA 420

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIK 478
           + ++L +I    ++F W+ +FP +E++EE  +    H+PFTMP      L    DL  ++
Sbjct: 421 LGKDLDLIQKGQWKFLWVTEFPMFEYSEELGRYQAMHHPFTMPMEEDLPLVDEEDLSRVR 480

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G +R H S V  +    +G +KE    +FG L  AFQ G+PPH G
Sbjct: 481 AKAYDIVLNGTELGGGSVRIHQSHVQEKMLEKLGFTKERATEQFGFLLEAFQYGVPPHAG 540

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV-SVEQLRELGLRIVEN 594
           +A G+DR+ M ++GA+++R+V  FP  ++  D +M +P+ V   +QL++L + I E 
Sbjct: 541 LAYGLDRLAMWMVGAESIRDVIAFPKGKDGSDAMMDAPAEVFDPQQLKDLHIAITEE 597


>gi|320009829|gb|ADW04679.1| aspartyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 605

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 285/594 (47%), Positives = 397/594 (66%), Gaps = 10/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYG+ Q+VA P +   +
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPGND 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E V+ IDG V +R A+ +N  + TG+IE+   ++E+L  A  LP  +  E   
Sbjct: 61  ALAKLTKETVVRIDGKVSARGADNVNPELPTGEIEIEVTEVEVLGEAGPLPFTINTEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF NG  V++ F RI + +++ +YG DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFRESMLKYGNDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++ F  S F+ F+        +          G +R F D + E+A   G  GLA++ 
Sbjct: 301 DISDIFADSGFKAFA------GKHVRALPVPDTAGQSRKFFDGLGEYAVEHGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G +A  GP+AK L   + + +  RL +  G + FF AG+  +     +  R   
Sbjct: 354 -RVGEDGTLA--GPIAKFLTEADVKTLTERLSLVPGHAVFFGAGEFDEVSKIMSAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G      F FCW++DFP YE +EE  +IDF+HNPF+MPQGG+E L+  D L I A+
Sbjct: 411 AKRAGHFEEGVFRFCWVVDFPMYEKDEETGRIDFSHNPFSMPQGGLEDLETKDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  E+M++AF   G  +E VE+ F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGIELSSGAIRNHEPELMIKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++ + 
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTVLDETRLRELNIQLRKP 584


>gi|229493472|ref|ZP_04387257.1| aspartyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229319433|gb|EEN85269.1| aspartyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 602

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 236/606 (38%), Positives = 325/606 (53%), Gaps = 26/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L        V L+GWV R R HGG+IF+D+RD  G+ QVV        E A  
Sbjct: 3   RTHLAGSLRPEQAEQTVTLTGWVARRRDHGGVIFIDLRDASGVAQVVFRAGDVA-EQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  I TG IE++A ++E+L+ +    LP   + +  E  
Sbjct: 62  LRAEYCVRVTGTVEVRPEGNQNFEIPTGAIEVNATELEVLNESAP--LPFQLDDQVGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+     I  R+++  + R  +    F+E  TP LT S+PEGARDFLVPS
Sbjct: 120 RLKYRYLDLRREGPGSAIRLRSKVSAAARGVLAHHEFVEVETPTLTRSTPEGARDFLVPS 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EM+FV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQP-EFTQLDIEMAFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            QDDI+   E +L  +++     + +     R+ Y +A+RRYG+DKPDLR  I +    +
Sbjct: 239 NQDDIILLAEEILTALWKLVG--HEIKTPIDRMTYTEAMRRYGSDKPDLRFDIELVECMD 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 297 FFKDTTFRVFQA------EYVGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL--VG 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L     E +   +  Q GD  FF AG      +    AR  IA++ 
Sbjct: 349 EDGTLG--GPVAKNLTDAEREGLAAHVGAQPGDCVFFAAGATKPMRALLGAARGEIARKK 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGMESLKGNDL 474
            +I+ + + F WI+D P +E   +                 H+ FT P+         D 
Sbjct: 407 DLIDPDAWAFVWIVDAPMFEPTADATASGDVALGHSAWTAVHHAFTSPKPEFFDTFDTDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD+VCNG EI  G IR H  ++  + F  +GIS+E  + +FG L  AF  G P
Sbjct: 467 DSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFKVMGISEEEAQEQFGFLLDAFAFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRI  LL G  ++REV  FP S    D L  +P+ +S +Q +E G+     
Sbjct: 527 PHGGIAFGWDRITALLAGMDSIREVIAFPKSGGGVDPLTDAPAPISAQQRKESGIDAKPE 586

Query: 595 PKKILK 600
            K   K
Sbjct: 587 KKSEDK 592


>gi|226306467|ref|YP_002766427.1| aspartyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|259511868|sp|C0ZZA3|SYD_RHOE4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226185584|dbj|BAH33688.1| aspartyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 602

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 236/606 (38%), Positives = 325/606 (53%), Gaps = 26/606 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L        V L+GWV R R HGG+IF+D+RD  G+ QVV        E A  
Sbjct: 3   RTHLAGSLRPEQAEQTVTLTGWVARRRDHGGVIFIDLRDASGVAQVVFRAGDVA-EQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  I TG IE++A ++E+L+ +    LP   + +  E  
Sbjct: 62  LRAEYCVRVTGTVEVRPEGNQNFEIPTGAIEVNATELEVLNESAP--LPFQLDDQVGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+     I  R+++  + R  +    F+E  TP LT S+PEGARDFLVPS
Sbjct: 120 RLKYRYLDLRREGPGSAIRLRSKVSAAARGVLAHHEFVEVETPTLTRSTPEGARDFLVPS 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EM+FV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQP-EFTQLDIEMAFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            QDDI+   E +L  +++     + +     R+ Y +A+RRYG+DKPDLR  I +    +
Sbjct: 239 NQDDIILLAEEILTALWKLVG--HEIKTPIDRMTYTEAMRRYGSDKPDLRFDIELVECMD 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 297 FFKDTTFRVFQA------EYVGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL--VG 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L     E +   +  Q GD  FF AG      +    AR  IA++ 
Sbjct: 349 EDGTLG--GPVAKNLTDAEREGLAAHVGAQPGDCVFFAAGATKPMRALLGAARGEIARKK 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGMESLKGNDL 474
            +I+ + + F WI+D P +E   +                 H+ FT P+         D 
Sbjct: 407 DLIDPDAWAFVWIVDAPMFEPTADATASGDVALGHSAWTAVHHAFTSPKPEFFDTFDTDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD+VCNG EI  G IR H  ++  + F  +GIS+E  + +FG L  AF  G P
Sbjct: 467 DSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFKVMGISEEEAQEQFGFLLDAFAFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRI  LL G  ++REV  FP S    D L  +P+ +S +Q +E G+     
Sbjct: 527 PHGGIAFGWDRITALLAGMDSIREVIAFPKSGGGVDPLTDAPAPISAQQRKESGIDAKPE 586

Query: 595 PKKILK 600
            K   K
Sbjct: 587 KKSEDK 592


>gi|86132448|ref|ZP_01051042.1| Aspartyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85817009|gb|EAQ38193.1| Aspartyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 582

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 228/592 (38%), Positives = 335/592 (56%), Gaps = 15/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACF 59
            YRTH+ G L  +DV   V L+GWV + R  G II++D+RD YG+TQ+V +    D+A  
Sbjct: 1   MYRTHNNGSLRAADVNKEVTLAGWVQKSRDKGFIIWVDLRDRYGMTQLVFDQERTDAALM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A+ +  E+V+ + G V+ R ++  N NI TG IEL   K+EIL+ +   P  +  E +
Sbjct: 61  EEARKLGREFVIQVTGTVVERDSK--NPNIATGDIELLVSKLEILNASLTPPFTIEDETD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR  + ++++ R R+   +R  +  ++FIE  TP L  S+PEGARD
Sbjct: 119 GGEDLRMKYRYLDIRRKPVRESLIFRHRVALEVRKYLSEQDFIEVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DILN  E + R + +E +        F R+ YDDA+R YG DKPD+R  +  
Sbjct: 238 EMAFVEQEDILNIFEGLTRHLLKEVNGVEIEK--FPRMLYDDAMRLYGNDKPDIRFGMKF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             + E   H +F VF+    V            G    R   D++ EW +      L  +
Sbjct: 296 GELNEVAQHKDFGVFNNAELVVG-----IAVPGGNSYTRKEIDKIIEWVKRPQVGALGMV 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R ++ G  +    V K  +  +          Q GD    ++GD  K  +  +  R  
Sbjct: 351 YSRCNDDG--SFKSSVDKFYDQEDLAKWAEVTGAQKGDLVCILSGDTNKVRAQMSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ LG+   + F   W++DFP  E +EE       H+PFT P+ G   L       +KA
Sbjct: 409 LAERLGLRKPDEFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQIELLDTKPGEVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H  E       ++G S+E  + +FG L  AF+ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKETQAIMLRHLGFSEEEAKAQFGFLMDAFEYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+V +L G + +R+   FP + +  D+++ +P+ +  EQL+EL L++
Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAPLDNEQLQELNLKL 580


>gi|282863865|ref|ZP_06272923.1| aspartyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282561566|gb|EFB67110.1| aspartyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 605

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 290/608 (47%), Positives = 401/608 (65%), Gaps = 15/608 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYG+ Q+VA P +   E
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPGNE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E V+ IDG V +R A+ +N  + TG+IE+   ++E+L  A  LP  +  E   
Sbjct: 61  ALAKLTKETVVRIDGKVSARGADNVNPELPTGEIEIEVTEVEVLGEAGPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF NG  V++ F RI + +++ +YG DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFRESMLKYGNDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++ F  S F+ F+        +          G +R F D + E+A   G  GLA++ 
Sbjct: 301 DISDVFADSGFKAFA------GKHVRALPVPDTAGQSRKFFDGLGEYAVEHGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G +A  GP+AK L   + + +  RL +  G + FF AG+  +     +  R   
Sbjct: 354 -RVGEDGTLA--GPIAKFLTETDVKTLTERLSLVPGHAVFFGAGEFDEVSKIMSAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G      F FCW++DFP YE +EE  +IDF+HNPF+MPQGG+E L+  D L I A+
Sbjct: 411 AKRSGHFEEGVFRFCWVVDFPMYEKDEETGRIDFSHNPFSMPQGGLEDLETKDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  E+M++AF   G  +E VE+ F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGIELSSGAIRNHEPELMIKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE-----NP 595
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++ +       
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTVLDETRLRELNIQLRKPVAGVKE 590

Query: 596 KKILKISV 603
           K   K SV
Sbjct: 591 KAEAKDSV 598


>gi|31793755|ref|NP_856248.1| aspartyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121638457|ref|YP_978681.1| aspartyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|224990951|ref|YP_002645638.1| aspartyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|31619349|emb|CAD94787.1| PUTATIVE ASPARTYL-TRNA SYNTHETASE ASPS (ASPARTATE--TRNA LIGASE)
           (ASPRS) (ASPARTIC ACID TRANSLASE) [Mycobacterium bovis
           AF2122/97]
 gi|121494105|emb|CAL72583.1| Putative aspartyl-trna synthetase aspS [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|224774064|dbj|BAH26870.1| aspartyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
          Length = 611

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 236/612 (38%), Positives = 334/612 (54%), Gaps = 29/612 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M   R+H+ G L   D G  V L+GWV R R HGG+IF+D+RD  GI QVV     D+  
Sbjct: 1   MFVLRSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEV 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
              A  +R+E+ + + G+V  R     N  I TG+IE++A  + +L       LP   + 
Sbjct: 61  LAQAHRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLGECAP--LPFQLDE 118

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R KYR+LDLRRD     I  R+R+  + R  +   +F+E  TP +T S+PEGAR
Sbjct: 119 PAGEELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGAR 178

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD
Sbjct: 179 DFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLD 237

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSFV+ +DI+   E VL  ++        +     RI Y +A+RR+GTDKPDLR  + 
Sbjct: 238 MEMSFVDAEDIIAISEEVLTELWALIG--YRIPTPIPRIGYAEAMRRFGTDKPDLRFGLE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +   T+ F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAY
Sbjct: 296 LVECTDFFSDTTFRVFQAP------YVGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAY 349

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +   + E G +   GPVAK+L       +   +  + GD  FF AG      +    AR 
Sbjct: 350 VL--VAEDGTLG--GPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARV 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMES 468
            IA  LG+I+ + + F W++D P +E  +E                 H+ FT P+   E 
Sbjct: 406 EIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWED 465

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              +D  S+ A  YD+VCNG EI  G +R H  ++  + F+ +G+ K  VE +FG L  A
Sbjct: 466 RIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEVEEKFGFLLEA 525

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           F  G PPHGGIA G DR   LL G  ++REV  FP +    D L  +P+ ++ +Q +E G
Sbjct: 526 FMFGAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESG 585

Query: 589 LRIVENPKKILK 600
           +     PK++ +
Sbjct: 586 ID--AQPKRVQR 595


>gi|305665586|ref|YP_003861873.1| aspartyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88710342|gb|EAR02574.1| aspartyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 582

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 222/594 (37%), Positives = 340/594 (57%), Gaps = 19/594 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YR+HSCG+L  S++   V LSGWVH+ R  G + ++D+RD YGITQ+V +      E+ 
Sbjct: 1   MYRSHSCGELRESNINEVVTLSGWVHKTRDKGFVAWVDLRDRYGITQLVFDEKRTSTELL 60

Query: 63  KSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  R+   E+V+ + G V+ R+++  N NI TG IE+  Q++ IL+ ++  P  +  + +
Sbjct: 61  EKARNLGREFVVQVKGKVIERASK--NNNIATGDIEVLVQELNILNTSKTPPFTIEDQTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR+ + +N++ R+++   +R  +  E FIE  TP L  S+PEGARD
Sbjct: 119 GGEDLRMKYRYLDIRRNPVKENLIFRSQVTMEVRNYLSKEGFIEVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DIL   E + R + +E     T    F R+ YD+A+ +YG DKPD+R  +  
Sbjct: 238 EMAFVEQEDILKAFEGLTRHLLKEIKGVETTE--FPRMTYDEAMAKYGNDKPDIRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             +     H +F VF+    V            G    R   D++ +W R    G  G+ 
Sbjct: 296 GELNSVAQHKDFNVFNSAELVVG-----IAVPGGASYTRKEIDKLVDWVRRPQVGAKGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+    D     +    V K  +  +        +   GD    ++G+  +  +  +  R
Sbjct: 351 YVKCNEDG----SFKSSVDKFYDQDDLGNWAKATEANPGDLICVLSGNINETRAQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ LG+ N   F   W++DFP  E +EE  +    H+PFT P+ G   L  ++  ++
Sbjct: 407 MELAERLGLRNNAEFAPLWVIDFPLLELDEETGRYHAMHHPFTSPKPGQLELLDSEPSNV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA  YDLV NG EI  G IR H  ++    F ++G + E  + +FG L  AFQ G PPHG
Sbjct: 467 KANAYDLVLNGNEIGGGSIRIHDKDIQSTMFKHLGFTPEEAKAQFGFLMDAFQYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DR+V +L G + +R+   FP + +  D+++ +P+ +  EQL+EL L++
Sbjct: 527 GIAFGLDRLVSILGGQETIRDFIAFPKNNSGRDVMIDAPAPIDREQLKELNLKL 580


>gi|269218547|ref|ZP_06162401.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211658|gb|EEZ77998.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 595

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 233/613 (38%), Positives = 334/613 (54%), Gaps = 35/613 (5%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G L   D+GS V L+GWV R R HGGI F+D+RD  GI QV         E+A  +R+E
Sbjct: 2   AGSLRSEDIGSSVTLTGWVDRRRDHGGIAFIDLRDASGIVQVTVR-----EEVAHELRNE 56

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGEREYPESIRF 126
           + L + G+V  R     NA + TG+IE+ A  + +L+   A    +    + +  E  R 
Sbjct: 57  YCLQVVGVVRERPDGNANAALSTGEIEVEAADVVVLNPSAALPFQVSEHADEQAGEEARL 116

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           KYR+LDLRR  + + I  R+    + R  +   +F+E  TP LT S+PEGARDFLVP+R+
Sbjct: 117 KYRYLDLRRAPMQRAIRLRSEASQAARKVLHGHDFVEVETPTLTRSTPEGARDFLVPARL 176

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           N GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV+Q
Sbjct: 177 NPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFVDQ 235

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           DD++   E+VLR ++        +     RI Y DA+ RYG+DKPDLR  + + N+TE+F
Sbjct: 236 DDVIAVAEDVLRELWALIG--YDLEKPIPRITYADAMERYGSDKPDLRFGLELVNLTEYF 293

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366
            ++ FRVF         Y    +   G    R   D+  EWA+++G  GLAY+     E 
Sbjct: 294 ENTPFRVFQNP------YVGAVVMPGGASQPRRAFDKWQEWAKARGAKGLAYVTIA--ED 345

Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426
           G +   GPVAK+++      +  ++  + GD  FF AG P++       AR  I +  G+
Sbjct: 346 GQLG--GPVAKNISEAERAGLAEKVGAKPGDCVFFAAGSPIEARELLGAARLEIGKRCGL 403

Query: 427 INCNCFEFCWIMDFPFYEWN---EEEKK-------IDFAHNPFTMPQGGMESLKGNDLLS 476
           I+   + F W++D P ++ +     E             H+ FT P+         D  +
Sbjct: 404 IDPKAWAFTWVVDAPLFKPSGAAAAEGDVALGHSAWTAVHHAFTSPKPECLDSFDVDPEN 463

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A+ YD+VCNG EI  G IR H  +V  + F  +GIS    + +FG L  AF+ G PPH
Sbjct: 464 ALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGISAAEAQEKFGFLLDAFKFGAPPH 523

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA G DRIV LL  A ++R+V  FP      D L  +P+ ++ +Q +E G+       
Sbjct: 524 GGIAFGWDRIVSLLTDAPSIRDVIAFPKIGAGWDPLTDAPAPITAQQRKEAGVD-----A 578

Query: 597 KILKISVTTILRN 609
           K  +       R 
Sbjct: 579 KFRETDADEKPRE 591


>gi|325963408|ref|YP_004241314.1| aspartyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469495|gb|ADX73180.1| aspartyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 592

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 231/604 (38%), Positives = 331/604 (54%), Gaps = 27/604 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    +G  V L+GWV R R HGG+ F+D+RD  G+ QVV   +    E+   
Sbjct: 3   RTHDLGSLRSEHIGQTVTLAGWVGRRRDHGGVAFVDLRDASGVAQVVVREE----EVFHG 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL I G V  R     N  + TG+IE+ A+K+ IL+ ++ LP  +    E  E  
Sbjct: 59  LRNEYVLQIIGTVSRRPEGNENPALATGEIEVMAEKVTILNTSDPLPFQIDEHVEVGEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R K+R+LDLRR    +N+  R+      R  +  + F+E  TP LT S+PEGARDF+VP+
Sbjct: 119 RLKHRYLDLRRPGPARNLRLRSEANRVARELLHQDGFVEVETPTLTRSTPEGARDFVVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLL   GF++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 179 RLAPGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDDI+   E++++ +++       +     RI Y DA+ R+G+DKPDLR  + +  +TE
Sbjct: 238 EQDDIIALGESIVKALWKLI--DVEIPTPIQRITYHDAMARFGSDKPDLRFGVELTELTE 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + F VF         Y    +   G    R   D   E+A+ +G  GLAY+ ++  
Sbjct: 296 FFKDTNFGVFKAP------YVGAVVMPGGASQPRRTLDGWQEFAKQRGHKGLAYVLFK-- 347

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +A  GPVAK+L       +   +  + GD  FF AG+     +    AR  I    
Sbjct: 348 EDGELA--GPVAKNLTEAERSGLADAVGAKPGDCIFFAAGEKSAARALLGAARVEIGHRT 405

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
           G+I+ N + FCW++D P +E                K    H+ FT P+         D 
Sbjct: 406 GLIDPNDWAFCWVVDAPMFEPAAAAVASGDVAVGAGKWTAVHHAFTSPKPEYMDSFDTDP 465

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD+VCNG EI  G IR H S+V  + F  +G+S E  + +FG L   F+ G P
Sbjct: 466 ESALAYAYDIVCNGNEIGGGSIRIHQSDVQERVFEVMGLSHEDAQEKFGFLLEGFKYGAP 525

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DR+V LL G  ++R+V  FP + N  D L  +P+ ++ +Q +E G+     
Sbjct: 526 PHGGIAFGWDRVVALLSGVDSIRDVIAFPKTGNGYDPLTAAPAPITPQQRKEAGVDFKPE 585

Query: 595 PKKI 598
            K  
Sbjct: 586 AKPA 589


>gi|262039241|ref|ZP_06012559.1| aspartate--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261746735|gb|EEY34256.1| aspartate--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 591

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 229/597 (38%), Positives = 362/597 (60%), Gaps = 15/597 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
            YR +   +L + +VG  V LSGW+ ++R  G  +F+D+RD YG+TQ+  N + +  E+ 
Sbjct: 1   MYRNYKLNELRIENVGEEVTLSGWISKIRDKGHFVFIDLRDRYGVTQIFINEEVSGKELQ 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              K  ++EWV+ + G+V+ RS++  N NI TG IE+ A++IE+LS +++LP  +     
Sbjct: 61  EKVKKFKNEWVIKVKGVVVERSSK--NPNIPTGDIEIQAKEIEVLSQSKQLPFEIDETGN 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+IR  YR+LD+RR  +  NI+KR  ++ S+R  M    F++  TPIL  ++PEGARD
Sbjct: 119 LNENIRLTYRYLDIRRPKMLNNIIKRNDMLFSIRKFMNENGFLDVDTPILAKATPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQ+LM +G D+Y+Q+A CFRDED R+DR P EF QLD+
Sbjct: 179 FVVPSRINKGDFYALPQSPQLFKQILMVAGIDKYYQLAKCFRDEDLRADRQP-EFTQLDV 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVEQ+D+LN ME + + VFE+ +        F R+ YDDA+  YG+DKPDLR  + +
Sbjct: 238 EMSFVEQEDVLNVMEKLAKKVFEDVTGEKVTET-FERMTYDDAMNNYGSDKPDLRFDMKL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG-QPGLAY 358
            ++++   +  F VF   +      +    P KG   +R +   + ++ ++     GLAY
Sbjct: 297 IDLSKEVENCGFGVFENAVKEGGNVKALVAP-KGEIFSRKYIKDLEDYVKTYFKAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  ++DE+G +    P+AK       + I  +L++++ ++   +A             R 
Sbjct: 356 I--KIDENGEI--NSPIAKFFTEETMQKIIQKLNIKNNETALILADKYKTVHDGLGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSI 477
            + +ELG+I+ + ++F W++DFP +EW+EEE +    H+PFT  +      L  N+L  I
Sbjct: 412 KLGEELGLIDKDAYKFLWVVDFPMFEWSEEENRYKAQHHPFTSIKVEDRKYLDTNELDKI 471

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K   YD+V NG+EI  G IR H  E+  + F  +G+ KE  + +FG      + G+PPHG
Sbjct: 472 KTDSYDMVLNGYEIGGGSIRIHDEELQEKVFEKLGLGKEEQQEKFGFFLEVLKYGVPPHG 531

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE-LGLRIVE 593
           G+A GIDR +M +L   +++EV  FP +    DL+ G+P+ V  + L E L L+++E
Sbjct: 532 GLAFGIDRWLMAMLKENSIKEVIPFPKTNKGQDLMTGAPAGVEEKVLEEDLNLKLLE 588


>gi|253578280|ref|ZP_04855552.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850598|gb|EES78556.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 598

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 223/580 (38%), Positives = 329/580 (56%), Gaps = 11/580 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFE 60
           +RT  C ++    +G  V L GWV + R  GGIIF+D+RD  GI Q++      D   F 
Sbjct: 9   HRTCRCAEVTKEMIGKEVVLMGWVQKARDKGGIIFVDLRDRSGIMQLIFENGSIDEEGFA 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE+V+ + G+V  R    +N N+ TG+IEL  + + +LS AE  P P+    + 
Sbjct: 69  KAGKLRSEFVIAVTGVVEER-GGAVNKNLATGEIELRVKSLRVLSEAEVPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR  L KNI+ +++++   R     E F+E  TP+L  S+PEGARD+
Sbjct: 128 KDEIRLKYRYLDLRRPDLQKNIMLKSKVMMITRQFFAKEGFLEIETPMLGKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FY LPQ+PQ YKQLLM SG+DRY QIA CFRDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGHFYGLPQSPQLYKQLLMCSGYDRYIQIARCFRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+++  E  L  +F+E  + + V     RI + +A+ R+G+DKPD+R  + +H
Sbjct: 247 LSFVDVDDVIDVNERFLAYLFKEVLDID-VKLPIQRITWQEAMDRFGSDKPDMRFGMELH 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++   +  F VF+  L             +G    R   D++ E+A+  G  GLAYI 
Sbjct: 306 DVSDVVKNCGFSVFTSALENGGSVRGINAEGQG-AMPRKKIDKLVEFAKGYGAKGLAYIA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D           AK +     +A+   +D + GD   F A             R  +
Sbjct: 365 IAEDG----TRKSSFAKFMTDEEMDALVAAMDGKAGDLLLFAADKKKLVYDVLGALRLEL 420

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++ +++ N + F W+ +FP  EW+EEE +    H+PFTM       L   D   ++A 
Sbjct: 421 AKQMDLLDKNEYRFVWVTEFPLLEWSEEENRFTAMHHPFTMLMEEDLPLLDTDPGKVRAK 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G +R H  ++  + F  +G +KE    +FG L  AF+ G+PPH G+A
Sbjct: 481 AYDIVLNGNEIGGGSVRIHQDDIQERMFEALGFTKEAAHEQFGFLLDAFKYGVPPHAGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
            G+DR+VML+    ++R+V  FP  ++   L+  SPS VS
Sbjct: 541 YGLDRLVMLMAKVDSIRDVIAFPKVKDASCLMTQSPSRVS 580


>gi|207092253|ref|ZP_03240040.1| aspartyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 577

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 223/591 (37%), Positives = 346/591 (58%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G V  R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGRVRLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+     +T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQEIFKAIG--HTISTPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFIDSSNAIFSNIAQDPKNKRIKALNVKGADALFSRSTLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            DE       GP+ K L+    + I  R + Q GD  FF AGD      +    R  +A+
Sbjct: 358 EDE-----IKGPLVKFLSEKGLKNILERTNAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+     ++  D+  ++A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKN----IECEDMEEVEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  ++  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEKMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|317498116|ref|ZP_07956418.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894593|gb|EFV16773.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 597

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 225/596 (37%), Positives = 336/596 (56%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++    +G+ V + GWV + R  G +IF+D+RD  GI Q+V + +    E    
Sbjct: 10  RSHRCTEVSNKLIGTEVTVMGWVQKRRNLGSLIFVDLRDRSGILQLVFDQEVLSEEDYNK 69

Query: 65  ---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
              +RSE+V+   G V  RSA  IN N+ TG IE+    + ILS +E  P P+  ++   
Sbjct: 70  ANSLRSEYVVAAVGTVEKRSA-AINENLKTGDIEIKVHTLRILSESETPPFPIDEKQTVK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  L +N+  R  +   +R  +  E F+E  TP+L  S+PEGARD+L
Sbjct: 129 DELRLKYRYLDLRRPNLQRNLRIRNDVTRMVRNFLGDEGFLEIETPVLGKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FY LPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGEFYGLPQSPQLFKQLLMCSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L+ +F+E  + + V    LR+ Y +A+ R+G+DKPD+R  + + N
Sbjct: 248 SFVDVDDVIDVNERLLKKIFKEVLDID-VQLPMLRMTYKEAMDRFGSDKPDMRFGMELTN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V++     +F VF   L              G  G R   D   ++A+  G  GLAYI  
Sbjct: 307 VSDTVAGCDFMVFKGALENGGSVRGLNAKGLGDLG-RKKIDGFVDYAKDFGAKGLAYIQL 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D           AK +     +A+   +D Q GD   F A           + R HIA
Sbjct: 366 KSDG----TVKSSFAKFMKEEEMDALIKAMDGQAGDLLLFAADKDKVVFDVLGNLRLHIA 421

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++  +I+ + ++F W+ +FP  EW++E+ +    H+PFTMP              ++A  
Sbjct: 422 KQYDMIDKSQYKFLWVTEFPLLEWSDEQNRYTAMHHPFTMPFEEDLEFIDERPGDVRAKA 481

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  ++  + F  +G +KE   NRFG L  AF+ G+PPH G+A 
Sbjct: 482 YDIVLNGTELGGGSIRIHQDDIQEKMFEALGFTKEDAYNRFGFLLDAFKFGVPPHAGLAY 541

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VM L G  ++R+V  FP  ++   L+  +P  V   QL ELG+ +    ++
Sbjct: 542 GLDRLVMWLTGEDSIRDVIAFPKVKDASCLMTQAPGPVDTLQLEELGIELSTPEEE 597


>gi|239942578|ref|ZP_04694515.1| aspartyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239989039|ref|ZP_04709703.1| aspartyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291446040|ref|ZP_06585430.1| aspartyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291348987|gb|EFE75891.1| aspartyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 597

 Score =  588 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 287/594 (48%), Positives = 395/594 (66%), Gaps = 10/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYG+ Q+VA P +   E
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPGNE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E V+ IDG V +R A+ +N  + TG+IE+   ++E+L  A  LP  +  E   
Sbjct: 61  ALAKLTKETVVRIDGKVSARGADNVNPELPTGEIEIEVSEVEVLGEAAPLPFTINTEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +F EF NG  V++ F RI + +++ +YG DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFTEFGNGREVTSPFPRIPFRESMLKYGNDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++ F  S F+ F+        +          G +R F D + E+A   G  GLA++ 
Sbjct: 301 DISDVFADSGFKAFA------GKHVRALPVPDTAGQSRKFFDGLGEYAVEHGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G +A  GP+AK L   + + +  RL +  G + FF AG+  +     +  R   
Sbjct: 354 -RVGEDGTLA--GPIAKFLTETDVKTLTERLSLVPGHAVFFGAGEFDEVSKIMSAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G      F FCWI+DFP YE +EE  +IDF+HNPF+MPQGG+  L+  D LSI A+
Sbjct: 411 AKRAGHFEEGVFRFCWIVDFPMYERDEETGRIDFSHNPFSMPQGGLADLEEKDPLSILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  E+ML+AF   G  +E VE  F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGIELSSGAIRNHEPELMLKAFEIAGYDRETVEQEFAGMLRAFRLGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++ + 
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELNIQLRKP 584


>gi|167767120|ref|ZP_02439173.1| hypothetical protein CLOSS21_01638 [Clostridium sp. SS2/1]
 gi|167711095|gb|EDS21674.1| hypothetical protein CLOSS21_01638 [Clostridium sp. SS2/1]
 gi|291559551|emb|CBL38351.1| aspartyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 597

 Score =  588 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 225/596 (37%), Positives = 335/596 (56%), Gaps = 11/596 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++    +G+ V + GWV + R  G +IF+D+RD  GI Q+V + +    E    
Sbjct: 10  RSHRCTEVSNKLIGTEVTVMGWVQKRRNLGSLIFVDLRDRSGILQLVFDQEVLSEEDYNK 69

Query: 65  ---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
              +RSE+V+   G V  RSA  IN N+ TG IE+    + ILS +E  P P+   +   
Sbjct: 70  ANSLRSEYVVAAVGTVEKRSA-AINENLKTGDIEIKVHTLRILSESETPPFPIDENQTVK 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR  L +N+  R  +   +R  +  E F+E  TP+L  S+PEGARD+L
Sbjct: 129 DELRLKYRYLDLRRPNLQRNLRIRNDVTRMVRNFLGDEGFLEIETPVLGKSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G FY LPQ+PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+DME+
Sbjct: 189 VPSRVHPGEFYGLPQSPQLFKQLLMCSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDMEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+++  E +L+ +F+E  + + V    LR+ Y +A+ R+G+DKPD+R  + + N
Sbjct: 248 SFVDVDDVIDVNERLLKKIFKEVLDID-VQLPMLRMTYKEAMDRFGSDKPDMRFGMELTN 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V++     +F VF   L              G  G R   D   ++A+  G  GLAYI  
Sbjct: 307 VSDTVAGCDFMVFKGALENGGSVRGLNAKGLGDLG-RKKIDGFVDYAKDFGAKGLAYIQL 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D           AK +     +A+   +D Q GD   F A           + R HIA
Sbjct: 366 KSDG----TVKSSFAKFMKEEEMDALIKAMDGQAGDLLLFAADKDKVVFDVLGNLRLHIA 421

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++  +I+ + ++F W+ +FP  EW++E+ +    H+PFTMP              ++A  
Sbjct: 422 KQYDMIDKSQYKFLWVTEFPLLEWSDEQNRYTAMHHPFTMPFEEDLEFIDERPGDVRAKA 481

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  ++  + F  +G +KE   NRFG L  AF+ G+PPH G+A 
Sbjct: 482 YDIVLNGTELGGGSIRIHQDDIQEKMFEALGFTKEDAHNRFGFLLDAFKFGVPPHAGLAY 541

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+VM L G  ++R+V  FP  ++   L+  +P  V   QL ELG+ +    ++
Sbjct: 542 GLDRLVMWLTGEDSIRDVIAFPKVKDASCLMTQAPGPVDTLQLEELGIELSTPEEE 597


>gi|21222206|ref|NP_627985.1| aspartyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|24212421|sp|Q9F323|SYD_STRCO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|10178901|emb|CAC08476.1| aspartyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
          Length = 587

 Score =  588 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 297/597 (49%), Positives = 404/597 (67%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRSSDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTEAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E  + +DG V+SR A+ IN ++ TG++E+   ++E+L  A+ LP  +  E   
Sbjct: 61  ALDKLTKESTVRVDGKVVSRGADNINPDLPTGEVEVEVGEVELLGAAQPLPFTINTEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTSVISSIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLHAGRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF NG  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFRPIEQLMTELFEEFGNGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F  SEF+ F+        +          G  R F D++ ++A SQG  GLA++ 
Sbjct: 301 DITDVFEGSEFKAFA------GKHVRALPVPDVSGQPRRFFDQLGDYAVSQGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G ++  GP+AK L   N   +  RL +  G + FF AG+  +        R   
Sbjct: 354 -RVGEDGKLS--GPIAKFLTEENVAELTKRLSLAPGHAVFFGAGEFDEVSKIMGAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G    N F FCWI+DFP YE +EE  KIDF+HNPF+MPQGGM++L+  D L I A+
Sbjct: 411 AKRAGHFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMDALENQDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  E+ML+AF   G   E VE  F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGVELSSGAIRNHEPEIMLKAFEIAGYDAETVEREFAGMLRAFRFGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL L + +   K
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDESRLRELHLTVRKPQPK 587


>gi|325107096|ref|YP_004268164.1| aspartyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324967364|gb|ADY58142.1| aspartyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 588

 Score =  588 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 224/589 (38%), Positives = 331/589 (56%), Gaps = 9/589 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RTH+CG+L  S  G  V+LSGWV + R H GI+F+D+RD YG TQ+  N +      + A
Sbjct: 3   RTHTCGELRKSHAGQQVKLSGWVDKYRDHAGIVFIDLRDRYGKTQIKFNLEDGSDIQKSA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +S+R E V+ + G V++R  + +N  + +G+IE+    + I S ++  P          E
Sbjct: 63  RSLRHEDVVTVTGEVVARPEDMVNPKLESGEIEVRVADLIIQSKSDTPPFLPSSSDLPNE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R K R +DLRR  L   +V R +    +R    A+ F++  TPIL  S+PEGARD+LV
Sbjct: 123 ELRLKNRVVDLRRPELQNAMVLRHKFTKLVRDYFDAQGFLDIETPILGRSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++G FYALPQ+PQ +KQLLM SG+DRY QIA CFRDED R+DR P EF Q+D+EM+
Sbjct: 183 PSRIHEGCFYALPQSPQIFKQLLMCSGYDRYMQIARCFRDEDLRADRQP-EFTQIDLEMA 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDD+L  ++ ++  +  + +          R  Y D + R+GTDKPD+R  + + ++
Sbjct: 242 FVEQDDVLGVIDGMVDKILTDLAGIQH-QMPLPRYSYADVMERFGTDKPDMRFGMELVDL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            E     +F VF   +           P       R   D + E+ +  G  GLA+   +
Sbjct: 301 AEIAGRCDFGVFKNTIEAGNRVRGLVAPQAADKYTRKKIDELTEFVKDYGAKGLAFFRVK 360

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                      P+AK  +  + +AI  +L  ++GD  F +A       +  A  RN + +
Sbjct: 361 EGA-----LDSPIAKFFSEDDQKAIIEKLGAENGDLIFCVADTNAVSSAALAALRNRLGE 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL + +   F   W++DFP   ++E+EK+    H+PF  P         +D  +++A  Y
Sbjct: 416 ELELYDPKAFSCLWVVDFPLMHFDEDEKRWYAEHHPFCYPHPDDLEKLDSDPAAVRAQSY 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E ASG IR H S +  + F  + I+ E  E RFG L +  + G PPHGG A G
Sbjct: 476 DLVVNGYEAASGSIRIHDSAIQQKVFDLLEINPEEAERRFGFLLQGLRFGAPPHGGAALG 535

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +DR VMLL G  N+R+V  FP +Q   DLL G+PS V  +QLREL +++
Sbjct: 536 LDRWVMLLCGYDNIRDVIAFPKTQKASDLLSGAPSDVDPKQLRELYIKL 584


>gi|46577184|sp|Q7TYA6|SYD_MYCBO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 609

 Score =  588 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 235/608 (38%), Positives = 333/608 (54%), Gaps = 29/608 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           R+H+ G L   D G  V L+GWV R R HGG+IF+D+RD  GI QVV     D+     A
Sbjct: 3   RSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEVLAQA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+E+ + + G+V  R     N  I TG+IE++A  + +L       LP   +    E
Sbjct: 63  HRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLGECAP--LPFQLDEPAGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRRD     I  R+R+  + R  +   +F+E  TP +T S+PEGARDFLV
Sbjct: 121 ELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGARDFLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMS
Sbjct: 181 PARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ +DI+   E VL  ++        +     RI Y +A+RR+GTDKPDLR  + +   
Sbjct: 240 FVDAEDIIAISEEVLTELWALIG--YRIPTPIPRIGYAEAMRRFGTDKPDLRFGLELVEC 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+ F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAY+   
Sbjct: 298 TDFFSDTTFRVFQAP------YVGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAYVL-- 349

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G +   GPVAK+L       +   +  + GD  FF AG      +    AR  IA 
Sbjct: 350 VAEDGTLG--GPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARVEIAN 407

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGN 472
            LG+I+ + + F W++D P +E  +E                 H+ FT P+   E    +
Sbjct: 408 RLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWEDRIES 467

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D  S+ A  YD+VCNG EI  G +R H  ++  + F+ +G+ K  VE +FG L  AF  G
Sbjct: 468 DTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEVEEKFGFLLEAFMFG 527

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G DR   LL G  ++REV  FP +    D L  +P+ ++ +Q +E G+   
Sbjct: 528 APPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESGID-- 585

Query: 593 ENPKKILK 600
             PK++ +
Sbjct: 586 AQPKRVQR 593


>gi|297201066|ref|ZP_06918463.1| aspartyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197712149|gb|EDY56183.1| aspartyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 587

 Score =  588 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 294/597 (49%), Positives = 403/597 (67%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRSSDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E  + +DG V+SR  E +N ++ TG++E+   ++E+L  A  LP  +  E   
Sbjct: 61  ALDKLTKESTVRVDGKVVSRGTENVNPDLPTGEVEVEVGEVELLGAAAPLPFTINTEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +HKNI+ R+ +I S+R +M+A  F E +TPIL+A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHKNIMLRSSVIASIRSKMVALGFNEMATPILSATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF NG  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F  SEF+ F+            A+P       R F D++ ++A SQG  GLA++ 
Sbjct: 301 DITDVFEGSEFKAFA-----GKHVRALAVP-DVSAQPRKFFDQLGDFAVSQGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G+++  GP+AK L   N   +  RL +  G + FF AG+  +        R   
Sbjct: 354 -RVAEDGSLS--GPIAKFLTEENVAELTKRLLLAAGHAVFFGAGEFDEVSKIMGAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G    N F FCWI+DFP YE +EE   IDF+HNPF+MPQGG+E+L+  D L I  +
Sbjct: 411 AKRAGHFEENVFRFCWIVDFPMYEKDEETGAIDFSHNPFSMPQGGLEALETQDPLDILGW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  ++ML+AF   G  +E VE +F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGVELSSGAIRNHEPDIMLKAFEIAGYDRETVEEKFAGMLRAFRFGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL L + +   K
Sbjct: 531 PGVDRIVMLLADEPNIRETISFPLNGNAQDLMMGAPTELEEARLRELHLSVRKPQPK 587


>gi|333025634|ref|ZP_08453698.1| putative aspartyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332745486|gb|EGJ75927.1| putative aspartyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 587

 Score =  588 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 295/597 (49%), Positives = 406/597 (68%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +A FE
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAAFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E VL +DG V+SR AE +N ++ TG +E+ A ++E+L  A  LP  +  E   
Sbjct: 61  TLDKLSKETVLRVDGKVVSRGAENVNPDLPTGAVEVEAGEVEVLGEAGPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I ++R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVIAAVRQKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGRFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +F EF  G  V++ F RI + +++ +YG DKPDLR  + +H
Sbjct: 241 MSFVEQEDVFQPVEKLMTELFTEFGGGREVTSPFPRIPFRESMLKYGNDKPDLRAQLELH 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++ F  SEF+ F+        +            +R F D++ E+A  QG  GLA++ 
Sbjct: 301 DISDVFASSEFKAFA------GKHVRALPVPDTAKQSRKFFDQLGEYAVEQGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G +A  GP+AK L   + +A+  RL +  G + FF AG+  +     +  R   
Sbjct: 354 -RVGEDGQLA--GPIAKFLTADDVKALTERLSLAPGHAVFFGAGEFDEVSKIMSAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G      F FCW++DFP +E +EE  KIDF+HNPF+MPQGGM++L+  D L I A+
Sbjct: 411 AKRAGHFEEGVFRFCWVVDFPMFEKDEETGKIDFSHNPFSMPQGGMDALEHKDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH   +ML+AF   G  +E VE+ F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGIELSSGAIRNHEPAIMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++ +  +K
Sbjct: 531 PGIDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELNIQLRKPVQK 587


>gi|295837689|ref|ZP_06824622.1| aspartate-tRNA ligase [Streptomyces sp. SPB74]
 gi|197695940|gb|EDY42873.1| aspartate-tRNA ligase [Streptomyces sp. SPB74]
          Length = 587

 Score =  588 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 294/597 (49%), Positives = 405/597 (67%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +A FE
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAAFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E VL +DG V+SR AE +N ++ TG +E+ A ++E+L  A  LP  +  E   
Sbjct: 61  TLDKLSKETVLRVDGSVVSRGAENVNPDLPTGAVEVEAGEVEVLGEAGPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I ++R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVIAAVRQKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGRFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +F EF  G  V++ F RI + +++ +YG DKPDLR  + +H
Sbjct: 241 MSFVEQEDVFQPVEKLMTELFTEFGGGREVTSPFPRIPFRESMLKYGNDKPDLRARLELH 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++ F  SEF+ F+        +            +R F D++ E+A  QG  GLA++ 
Sbjct: 301 DISDVFAGSEFKAFA------GKHVRALPVPDTAKQSRKFFDQLGEYAVEQGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G +A  GP+AK L   + +A+  RL +  G + FF AG+  +     +  R   
Sbjct: 354 -RVGEDGQLA--GPIAKFLTADDVKALTERLSLAPGHAVFFGAGEYDEVSKIMSAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G      F FCW++DFP +E +EE  K DF+HNPF+MPQGGM++L+  D L I A+
Sbjct: 411 AKRSGHFEEGVFRFCWVVDFPMFEKDEETGKTDFSHNPFSMPQGGMDALEHKDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH   +ML+AF   G  +E VE+ F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGIELSSGAIRNHEPAIMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++ +  +K
Sbjct: 531 PGIDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELNIQLRKPVQK 587


>gi|196228956|ref|ZP_03127822.1| aspartyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196227237|gb|EDY21741.1| aspartyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 609

 Score =  588 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 228/601 (37%), Positives = 336/601 (55%), Gaps = 14/601 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
            YRTHSC  L  +D+G  V L+GWV+  R  GG+IF+D+RD  G+TQ+V   +       
Sbjct: 16  MYRTHSCHQLRPADIGQSVTLAGWVNTNRDQGGVIFVDLRDREGVTQIVFRSEENADATV 75

Query: 62  -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +RSE V+ I G V +R   T NA + TG IE+ A  +++L+ A+  P P+   +  
Sbjct: 76  HAHKLRSEDVIQITGKVAARLPGTENAKLATGAIEIIATDLKVLNKADVPPFPLDDPK-V 134

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YR+LDLR D + +N+  R RI+ + R  +    F+E  TP+L+  +PEGARDF
Sbjct: 135 NEDLRLEYRYLDLRTDHMQRNLKLRHRIVKATRDYLDDAGFLEIETPVLSNPTPEGARDF 194

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G+FYALPQAPQQYKQLL  +G ++YFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 195 LVPSRLNPGTFYALPQAPQQYKQLLQVAGLEKYFQIARCFRDEDLRADRQP-EFTQIDVE 253

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+   +I   +E +L+ +F+E    +     F R+ Y DA+ R+G+DKPDLR  + + 
Sbjct: 254 ASFITDVEIQTLIEGMLKRIFKEARGVDI-PTPFPRMTYADAMNRFGSDKPDLRFGLELV 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR-SQGQPGLAYI 359
           ++ + F  S F+VF  +       +           ++    +  EW +   G  GLAYI
Sbjct: 313 DLADIFKESGFKVFRSVADSGGVIKALNAKGAAALLSKEQLKKWEEWVKTEFGAKGLAYI 372

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADARN 418
            W    S       P+ K  +    +A+  R+    GD  FF A   L+         R 
Sbjct: 373 KW----SEGGEWESPIVKFFSDAEKKALAERMGFAAGDVLFFGADMKLEAVAEVLGRVRL 428

Query: 419 HIAQELGII--NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLL 475
             A  LG++    +   F W++DFP   ++ E+      H+PFT P+   M +L+  +  
Sbjct: 429 RCADILGLLAAKKDELNFLWVVDFPLLAFSPEDNHWVAVHHPFTRPKAEDMPALEAGEYA 488

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            ++A  YD+V NG E+  G IR H  ++  + F  +G+  E  + +F  L RAF  G PP
Sbjct: 489 KVRAVAYDVVLNGVELGGGSIRIHEKDLQTKMFEVLGVGPEEQQLKFAHLLRAFSFGAPP 548

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR+VML +GA+++REV  FP +   CDL+  SP  V  +QLRE+ +      
Sbjct: 549 HGGIALGLDRLVMLAVGAESIREVIAFPKNNRGCDLMTHSPVEVDFKQLREVYISSTAKK 608

Query: 596 K 596
            
Sbjct: 609 N 609


>gi|194476856|ref|YP_002049035.1| aspartyl-tRNA synthetase [Paulinella chromatophora]
 gi|171191863|gb|ACB42825.1| aspartyl-tRNA synthetase [Paulinella chromatophora]
          Length = 607

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 228/610 (37%), Positives = 352/610 (57%), Gaps = 22/610 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           R+H CGDL +++V + V+LSGWV R R HGG+IF+D+RD  G  Q+  +P+     F  A
Sbjct: 2   RSHGCGDLRITNVANSVQLSGWVDRFRDHGGVIFIDLRDQSGTIQIKVDPEQGPELFTQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           + +R+E VL ++G+V +R   +IN  + TG+IE+ A+ + +L+         + +  +  
Sbjct: 62  EHLRNETVLKVEGMVAARPTLSINERLSTGEIEVIAKSLTVLNSVNGTFPFSVSIHDDEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LDLRR+ ++ N+  R   + + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 VREELRLRYRYLDLRRERMNNNLRLRHNTVKAARRFLENEGFIEIETPLLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV  G ++ALPQ+PQ +KQLLM  G +RY+QIA CFRDED R+DR P EF Q+DM
Sbjct: 182 YLVPSRVCGGEWFALPQSPQIFKQLLMVGGIERYYQIARCFRDEDLRADRQP-EFTQIDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ Q +IL   E+++  +++E  +   +   F R+ + +A  RYGTD+PD R  + +
Sbjct: 241 EMSFMNQKEILRLNESLIASIWKEVKDIE-LQLPFTRMTWHEATERYGTDRPDARYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC----DRMNEWARSQGQPG 355
            N+++   + EF+VFS  ++     +  AIP      +        D + E A + G  G
Sbjct: 300 VNISDIVKNIEFKVFSSAIANGGSVKCIAIPEGNDAISNTRIKPGGDILRE-AEASGAGG 358

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LA+I  R+ E+G +  +G +  +L+      + +R   + G    F AGD          
Sbjct: 359 LAFI--RVRENGEIDSIGAIKNNLSEKQKLELLIRTGAEPGTLLLFGAGDTSTVNRVLNR 416

Query: 416 ARNHIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            R +IA++L +I    +   + F W+ DFP +E+N+EE +++  H+PF  P         
Sbjct: 417 VRQYIARDLVLIASASDNKIWNFLWVTDFPMFEFNKEENRLEALHHPFCSPNLKDLGDDT 476

Query: 472 NDLLS----IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
            +        +A  YDLV NG E+  G +R H SE+  Q    +G+S E  + +FG L  
Sbjct: 477 ANYRKRLPNARAQAYDLVLNGLELGGGSLRIHNSELQKQVLQTIGLSAEEAQRQFGFLMD 536

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           A   G PPHGGIA G+DR+VMLL G +++R+   FP +Q    L+  +PS VS +QL EL
Sbjct: 537 ALNMGAPPHGGIAFGLDRLVMLLAGEESIRDTIAFPKTQQARCLMTQAPSNVSNKQLEEL 596

Query: 588 GLRIVENPKK 597
            +    NP+K
Sbjct: 597 YVASTWNPEK 606


>gi|302552795|ref|ZP_07305137.1| aspartyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302470413|gb|EFL33506.1| aspartyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 587

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 289/597 (48%), Positives = 399/597 (66%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRSSDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPSYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E  + +DG V+SR  E IN  + TG++E+   ++E+L  A  LP  +  E   
Sbjct: 61  ALDKLSKESTVRVDGKVVSRGGENINPELPTGEVEVEVGEVELLGAAAPLPFTINTEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+++R +M A  F E +TPIL+A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILSATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLHPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF  G  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPVEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F  SEF+ F+        +             R F D++ ++A SQG  GLA++ 
Sbjct: 301 DITDIFEGSEFKAFA------GKHVRALPVPDVSAQPRKFFDQLGDYAVSQGARGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G+++  GP+AK L   N   +  RL +  G + FF AG+  +        R   
Sbjct: 354 -RVAEDGSLS--GPIAKFLTEENVAELTKRLSLAAGHAVFFGAGEFDEVSKIMGAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G    N F FCWI+DFP YE +EE   IDF+HNPF+MPQGG+E+L+  D L I  +
Sbjct: 411 AKRAGHFEENVFRFCWIVDFPMYEKDEETGAIDFSHNPFSMPQGGLEALESQDPLDILGW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  E+ML+AF   G  ++ VE +F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGVELSSGAIRNHEPEIMLKAFEIAGYDRDTVEEKFAGMLRAFRFGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +L+EL L + +   K
Sbjct: 531 PGVDRIVMLLADEPNIRETISFPLNGNAQDLMMGAPTELEEARLKELHLSVRKPQPK 587


>gi|290958925|ref|YP_003490107.1| aspartyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260648451|emb|CBG71562.1| aspartyl-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 587

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 293/597 (49%), Positives = 403/597 (67%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E  + +DG V+SR +E +N ++ TG+IE+   ++E+L  A  LP  +  E   
Sbjct: 61  ALDRISKESTVRVDGKVVSRGSENVNPDLPTGEIEVEVGEVELLGAAAPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+++R +M A  F E +TPIL+A+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILSATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF NG  V++ F RI + +++ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFRESMLKYGSDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F  SEF+ F+            A+P       R F D++ E+A  QG  GLA++ 
Sbjct: 301 DITDVFEGSEFKAFA-----GKHVRALAVP-DVSAQPRKFFDQLGEYAIEQGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G+++  GP+AK L   N   +  RL +  G + FF AG+  +        R   
Sbjct: 354 -RVAEDGSLS--GPIAKFLTEENVAELTKRLSLAAGHAVFFGAGEFDEVSKIMGAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G      F FCWI+DFP YE +EE  KIDF+HNPF+MPQGG+E+L+  D L I  +
Sbjct: 411 AKRAGHFEEGVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLEALETQDPLDILGW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  ++ML+AF   G  +E VE +F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGVELSSGAIRNHEPDIMLKAFEIAGYDRETVEEQFAGMLRAFRFGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL L + +   K
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELEEARLRELHLSVRKPQPK 587


>gi|150024383|ref|YP_001295209.1| aspartyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|166225345|sp|A6GWB6|SYD_FLAPJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|149770924|emb|CAL42389.1| Aspartate--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 583

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 220/594 (37%), Positives = 333/594 (56%), Gaps = 19/594 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACF 59
            YR+H+CG+L  + +   V L+GWV + R  G + ++D+RD YGITQ++ +    D   F
Sbjct: 1   MYRSHNCGELNATHINKEVTLAGWVQKSRDKGFMNWVDLRDRYGITQLMFDESRSDKTVF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+AK++  E+V+ + G V+ R A+  N NI TG+IE+   ++ IL+ +   P  +  E +
Sbjct: 61  ELAKTLGREFVIQVKGTVIEREAK--NKNISTGEIEILVTQMTILNSSLTPPFTIEDETD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR KYR+LD+RR+ +  +++ R ++   +R  +   +F E  TP L  S+PEGARD
Sbjct: 119 GGEDIRMKYRYLDIRRNPVKNSLLFRHKVAMEVRKYLSDLDFCEVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DILN  E + R + +E          F R+ Y+ A++ YG DKPD+R  +  
Sbjct: 238 EMAFVEQEDILNIFEGLTRHLLKELKGIEVEK--FPRMTYNHAMKTYGNDKPDIRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             + E+  H +F VF+    V     V       G  +R   D + EW +    G  G+ 
Sbjct: 296 GELNEYAKHKDFPVFNAAELV-----VAIAVPGVGEYSRKEIDALIEWVKRPQVGASGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+    D          V K  +  +          + GD  F ++G   K  +  +  R
Sbjct: 351 YVKCNEDG----TYKSSVDKFYDQGDLSHWAKTTGAKAGDMIFVLSGPADKTRAQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A  LG+ N   F   W++DFP  E++EE  +    H+PFT P+     L   D  S+
Sbjct: 407 MELATRLGLRNPAEFAPLWVVDFPLLEFDEESGRYHAMHHPFTSPKPEDMHLLETDPKSV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG EI  G IR H        F  +G ++E  +N+FG L  AFQ G PPHG
Sbjct: 467 RANAYDMVLNGNEIGGGSIRIHDKNTQALMFKYLGFTEEEAKNQFGFLMDAFQFGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G+DR+V +L G + +R+   FP + +  D+++ +PS +   QL+EL +++
Sbjct: 527 GLAFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPSIIDDSQLKELHIQL 580


>gi|315656682|ref|ZP_07909569.1| aspartate--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315492637|gb|EFU82241.1| aspartate--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 599

 Score =  588 bits (1516), Expect = e-165,   Method: Composition-based stats.
 Identities = 232/602 (38%), Positives = 336/602 (55%), Gaps = 31/602 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R H C +L ++  G  V L GWV R R HGG+ F+D+RD  GI Q+V + +         
Sbjct: 3   RNHKCAELNLNHDGQTVTLCGWVDRRRDHGGVAFMDLRDASGIVQLVVSEEVVR-----E 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE---YP 121
           VR+E+VL + G V  R     N +I TG+IE+ A  +EIL+    LP  V    E     
Sbjct: 58  VRNEYVLKVTGKVRKRPEGNENPDIATGEIEVMADDVEILNSCATLPFQVSEHAEDSKVG 117

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR +YRF+DLRR  LH N+V R+RI    R  M    F+E  TP LT S+PEGARDF+
Sbjct: 118 EDIRLRYRFVDLRRRQLHDNLVLRSRISQIARRVMEEHEFLEIETPTLTRSTPEGARDFV 177

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLLM  G +RYFQ+A C+RDED R+DR P EF QLDMEM
Sbjct: 178 VPARIRPGSWYALPQSPQLFKQLLMVGGMERYFQLARCYRDEDSRADRQP-EFTQLDMEM 236

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+QDD++   E++L+ +++       ++    R+ + +A+ R+G+DKPDLR    + +
Sbjct: 237 SFVDQDDVIEVTEHLLKEIWKVIG--YDLTTPIPRMPFQEAMDRFGSDKPDLRFGYELVD 294

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+ F  + F++F         Y    +   GG   R   D+  EWA+++G  GLAY+  
Sbjct: 295 LTDFFKDTPFKIFQAP------YVGAVVMPGGGSQPRRTFDKWQEWAKARGAKGLAYVTL 348

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             DE G     GPVAK+++      +      Q GD  FF AGD     +    AR  I 
Sbjct: 349 --DEKGEAG--GPVAKNISDAEKVGLAAATGAQPGDCIFFAAGDKTASQTLLGAARLEIG 404

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGMESLKG 471
           +   +I+   + F W++D P ++ + E +               H+ FT P+        
Sbjct: 405 RRCNLIDEKAWAFTWVVDAPLFKPSGEAEAEGDVALGHSAWTAVHHAFTSPKPECLDTFD 464

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D  S  A+ YD+VCNG E+  G IR H  ++  + F  +G S+E  + RFG L  AF+ 
Sbjct: 465 TDPGSALAYAYDIVCNGVELGGGSIRIHRRDIQERVFKVMGFSQEEAQARFGFLLDAFKY 524

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG+A G DRI  +L G+ ++R+V  FP + +  D L G+P+ ++ EQ +E G+  
Sbjct: 525 GAPPHGGLALGWDRIAGMLTGSPSIRDVIAFPKAGDGLDPLTGAPAPITDEQRKETGVDY 584

Query: 592 VE 593
           V 
Sbjct: 585 VP 586


>gi|153004196|ref|YP_001378521.1| aspartyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152027769|gb|ABS25537.1| aspartyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 616

 Score =  588 bits (1516), Expect = e-165,   Method: Composition-based stats.
 Identities = 222/603 (36%), Positives = 334/603 (55%), Gaps = 16/603 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RTH+CG+L  +DVG  V L GWV+  R HGG +F+D+RD  G+TQVV   D      ++
Sbjct: 21  KRTHTCGELTKADVGKDVVLFGWVNNRRDHGGAVFIDLRDRTGVTQVVFEADVRPEVHDL 80

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +R E+ + + G V+SR A   N  + TG IE+ A ++E+ + +E  P  +  + +  
Sbjct: 81  AGQLRLEYCVGLRGKVVSRGA-NANPKLRTGDIEVHATELELFNRSEPTPFQIEDKLDTS 139

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R +YR+LDLRR  L K ++ R R+ +  R       F+E  TP +   +P GAR+FL
Sbjct: 140 EEKRLQYRYLDLRRAPLQKTLMTRARVNHLTRNYFTDLAFLELETPFMVKYTPGGARNFL 199

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYAL ++PQ +KQL M +GFDRYFQI  CFRDED R DR P EF Q+D+EM
Sbjct: 200 VPSRLNPGKFYALAESPQLFKQLYMMAGFDRYFQIVRCFRDEDLRLDRQP-EFTQIDVEM 258

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI---I 298
           SFVEQ+D+ + +E ++  +++E      +   F R+ +D+++ +YG DKPDLR  +   +
Sbjct: 259 SFVEQNDVFDVIEGLVVRLWKEVLGVE-LPRPFPRMPFDESMAKYGNDKPDLRFDMPHVV 317

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +  +          +  + +      +   +PA     +R   D++ E+ +  G  GLA 
Sbjct: 318 LTELVRQHDGGGLPLLEEAVKAKGIVKAMRVPA-SANLSRTEIDKLEEYVKGMGAKGLAR 376

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                   G      P AK +     EA+      Q GD   F  G      +  A+ R 
Sbjct: 377 AKI---GDGGEWTQSPFAKTVTPALREAVNAACGAQPGDLLLFQFGKESVVHTVMANLRV 433

Query: 419 HIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           H+A+ +G+I        + F W+++ P +E++EE  +   AH+ FT P          D 
Sbjct: 434 HLAKRMGLIPEYGSGGQWRFLWVVNPPLFEFDEESGQWAAAHHAFTRPHDTDVQYLETDP 493

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             +  ++YDLV NGFEI  G IR H   V  + F  +GIS E  +N+FG L  A + G P
Sbjct: 494 GKVNCYRYDLVLNGFEIGGGSIRLHDPAVQARVFKAMGISDEEAKNKFGFLLEALKMGAP 553

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL GA+++R+V  +P +Q   DL+ G+P  V  +QLRE+ ++   +
Sbjct: 554 PHGGIALGMDRLVMLLTGAESLRDVVAWPKTQKGTDLMTGAPGDVDAKQLREVYVKSTYD 613

Query: 595 PKK 597
           P K
Sbjct: 614 PGK 616


>gi|257460371|ref|ZP_05625472.1| aspartyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257441702|gb|EEV16844.1| aspartyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 584

 Score =  588 bits (1515), Expect = e-165,   Method: Composition-based stats.
 Identities = 237/597 (39%), Positives = 340/597 (56%), Gaps = 18/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           R+H C DL  +D+G  V + GWV+  R HGG+IF+D+RD  G+ Q+V +P  +   +E+A
Sbjct: 2   RSHYCTDLSKNDIGKSVTVCGWVNSYRDHGGVIFIDLRDRSGLLQLVCDPKDSHSAYEVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +VR+E+VL   G + +R     N N+ TG IE+  + +EI + ++ LP  V G++   E
Sbjct: 62  NTVRNEFVLKAVGKIRARGEGLENPNLKTGDIEVVVESLEIENPSKPLPF-VIGDKSVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             + KYRFLDLR +        R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ETKLKYRFLDLRAEGSFDKFKMRSKAAIAARNALDRLGFVEVETPILTRATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVYPGSFYALPQSPQLFKQLLMCSGFDKYFQIARCFRDEDLRADRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q D++   E VL+ +F+  S G  +   F  + Y DA+  YG+DKPDLR  +   +V
Sbjct: 240 FNTQYDVMRVAEEVLKDIFK--SCGREIVTPFRHMEYKDAMELYGSDKPDLRYDMPFIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG--GGNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +FS +        V A+  +GG    ++       E+ +  G  GLA+I 
Sbjct: 298 ADIFEKSSNEIFSNLAKDRKANRVKALKVEGGDLKFSKRQMQGFEEYVKKFGAQGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K       + +  R  ++ GD  FF AG       +    R  +
Sbjct: 358 VKED-----GLKGPLVKFFEKSELDELIKRCGLKVGDVVFFGAGKKKIVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ELG+I+ N  EF W+++FP +E N++       H+PFTMP    E     DL  I + 
Sbjct: 413 ANELGLIDPNRLEFLWVVNFPMFEQNDD-GSYSAMHHPFTMPNNPDE----PDLEDITSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I       +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGIELGGGSIRIHKADIQEKVFRLLKIEPAEQREKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G DR++ML+ G+ ++REV  FP +Q     L  +PS V+ EQLRELGLR+ +  +K
Sbjct: 528 IGFDRLMMLVTGSSSIREVIAFPKTQRAQCPLTKAPSVVTDEQLRELGLRLHKKEQK 584


>gi|317010837|gb|ADU84584.1| aspartyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 577

 Score =  588 bits (1515), Expect = e-165,   Method: Composition-based stats.
 Identities = 227/591 (38%), Positives = 347/591 (58%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DV   V+++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEVSEKDVDKIVKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G V  R A   N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKVRLRGAGLENPKLKTGKIEIVLEELIIENKSATPPIE-IGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR  + ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLSAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+     +T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQEIFKAIG--HTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAKDPKNKRIKALNVKGADVIFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            DE       GP+ K L+    + I  R + Q GD  FF AGD      +    R  +A+
Sbjct: 358 EDE-----IKGPLVKFLSEKGLKNILERTNAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ N   F W+++FP +E  E       AH+PFTMP+     ++  D+  I+A+ Y
Sbjct: 413 MLDLIDKNALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKN----IECEDMEEIEAYAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  ++  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEDMQKKVFERINIDEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS +S EQLREL +R+ +
Sbjct: 527 FDRLIMLMTQSHSIRDVIAFPKTQKASCLLTDAPSPISEEQLRELHIRLRK 577


>gi|189460795|ref|ZP_03009580.1| hypothetical protein BACCOP_01442 [Bacteroides coprocola DSM 17136]
 gi|189432514|gb|EDV01499.1| hypothetical protein BACCOP_01442 [Bacteroides coprocola DSM 17136]
          Length = 585

 Score =  588 bits (1515), Expect = e-165,   Method: Composition-based stats.
 Identities = 223/598 (37%), Positives = 340/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            +RT++CG+L ++D G  V L+GWV R R  GG+ F+D+RD YGITQ+V N D      E
Sbjct: 1   MFRTYTCGELRLADAGKNVTLAGWVQRTRKMGGMTFVDLRDRYGITQLVFNTDVNAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  RS++  NAN+ TG IE+   ++ +L+ A   P  +    + 
Sbjct: 61  RANHLGREFVIQVKGQVSERSSK--NANLPTGDIEIIVSELNVLNTALTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + KN+  R R+   +R  + ++ F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRTAVRKNLELRHRMTMEVRRYLDSKGFLEVETPMLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI+   E + + +F+E      ++  F+R+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDIIQMFEGMAKHLFKELRGVE-LTEPFIRMPWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAY 358
            + +      F VF     +                 R   D++ E+ +    G  GL Y
Sbjct: 297 ELMDILKGYGFSVFDNAAYIGG-----ICAEGAAHYTRKQLDQLTEFVKRPQIGAKGLVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  GNV     V K  +    + ++     + GD    ++GD + K      + R
Sbjct: 352 A--RVEADGNVK--SSVDKFYSQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   +  ++
Sbjct: 408 LEMGNQLGLRDKNQFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTNPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVVNGVEVGGGSIRIHDSQLQAKMFEILGFTPEKAQEQFGFLMNAFKFGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +P  +  +QL EL L++    
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGYLDQKQLDELNLKVEIKE 585


>gi|313884180|ref|ZP_07817946.1| aspartate--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620627|gb|EFR32050.1| aspartate--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 593

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 224/595 (37%), Positives = 331/595 (55%), Gaps = 10/595 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT   G +    VG  + L GWV + R  GG+IF+D+RD  G  QVV +        + A
Sbjct: 4   RTVYNGLVSEEYVGQEITLKGWVQKRRDLGGVIFIDLRDREGFCQVVFDRQYIPDQMDEA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+V+ + G +  R+ E+IN  I TG  EL A ++ +L+ ++   + +  +R   E
Sbjct: 64  DHLRSEYVVEVTGKLRHRAEESINPKIPTGHFELVAHELTVLAKSKTPAIYIEDDRTSDE 123

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + KN+  R ++  ++R  +  ++FI+  TP LT S+PEGARDFLV
Sbjct: 124 EVRLKYRYLDLRRPNMVKNLKLRHQVTKTIRHYLDNKDFIDVETPYLTRSTPEGARDFLV 183

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R    SFYALPQ+PQ YKQLLM SG DRY+QI  CFRDED R DR P EF Q+D+E S
Sbjct: 184 PTRREPNSFYALPQSPQIYKQLLMGSGIDRYYQIVRCFRDEDLRGDRQP-EFTQVDLETS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ Q +I   +EN+L+ V +E          F  + YD+A+  YG+DKPD+R  + + ++
Sbjct: 243 FMTQAEIQEIVENMLKDVVKETRGLEIKEA-FPVMTYDEAMNSYGSDKPDIRFDMTLKDL 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++    ++F+VF   +      +   +        R   D +    +  G  GLA+    
Sbjct: 302 SDFAATADFKVFRAAVENGGKVKAINLKGLADEYTRKTADELYNVVKPFGAKGLAWTKIT 361

Query: 363 LDESGNVAGMGPVAKHL-NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            D        GP+AK L +  + +AI   +D + GD  FF+A       +     R H+A
Sbjct: 362 ED-----GFNGPIAKFLGSDEDYQAITSAVDGEVGDILFFMADSADVVNNSLGALRTHLA 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            + G+ +     F W++D+P  E++ E  +    H+PFT PQ    +          A  
Sbjct: 417 AKHGLYDEAELAFLWVVDWPLLEFDPEAGRYVAMHHPFTSPQNSDIAELKAHPEKALANA 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG+EI  G IR H  E+  Q F  +G + E  EN+FG L  AF  G PPHGG+A 
Sbjct: 477 YDIVLNGYEIGGGSIRIHTREMQDQMFELLGFTPEEAENQFGFLLHAFDYGFPPHGGLAI 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+DR+VM+L   KN+R+V  FP S +  DL+  SP+ V+ +QLREL L + E+ K
Sbjct: 537 GLDRLVMILAQEKNIRQVIAFPKSGSGMDLMSNSPAAVANDQLRELNLAVKESKK 591


>gi|256786704|ref|ZP_05525135.1| aspartyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289770599|ref|ZP_06529977.1| aspartyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289700798|gb|EFD68227.1| aspartyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 587

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 297/597 (49%), Positives = 404/597 (67%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +  +E
Sbjct: 1   MHRYRSHTCGELRSSDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTEAYE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E  + +DG V+SR A+ IN ++ TG++E+   ++E+L  A+ LP  +  E   
Sbjct: 61  ALDKLTKESTVRVDGKVVSRGADNINPDLPTGEVEVEVGEVELLGAAQPLPFTINTEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I+S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTSVISSIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR++ G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLHAGRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +FEEF NG  V++ F RI + +A+ +YG+DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFRPIEQLMTELFEEFGNGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F  SEF+ F+        +          G  R F D++ ++A SQG  GLA++ 
Sbjct: 301 DITDVFEGSEFKAFA------GKHVRALPVPDVSGQPRRFFDQLGDYAVSQGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G ++  GP+AK L   N   +  RL +  G + FF AG+  +        R   
Sbjct: 354 -RVGEDGKLS--GPIAKFLTEENVAELTKRLSLAPGHAVFFGAGEFDEVSKIMGAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G    N F FCWI+DFP YE +EE  KIDF+HNPF+MPQGGM++L+  D L I A+
Sbjct: 411 AKRAGHFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMDALENRDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  E+ML+AF   G   E VE  F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGVELSSGAIRNHEPEIMLKAFEIAGYDAETVEREFAGMLRAFRFGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL L + +   K
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDESRLRELHLTVRKPQPK 587


>gi|237750881|ref|ZP_04581361.1| aspartyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229373326|gb|EEO23717.1| aspartyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 588

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 238/595 (40%), Positives = 343/595 (57%), Gaps = 18/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH    L   D+G  V L GW +  R HGG++F+D+RD  GI Q+VA+P S    IA S
Sbjct: 2   RTHYNTALSTDDIGKEVTLCGWCNSYRDHGGVVFIDLRDKSGIIQLVADPSSKAHTIASS 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR E+VL   G V +R    +N  + TG IE+    + I + A+  P+ + G+    E +
Sbjct: 62  VRDEYVLLAKGRVRARGEGLVNPKLKTGAIEVVLDTLTIENKAQTTPI-IIGDESVNEEL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR          R +I +  R  + +  F+E  TPILT ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSQKSLDIFKLRAKIASVTRNFLESHGFLEVETPILTKATPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ GSFYALPQ+PQ +KQLLM SGF+RY+QIA CFRDED R+DR P EF Q+D+EMSF 
Sbjct: 181 RVHDGSFYALPQSPQLFKQLLMMSGFERYYQIAKCFRDEDLRADRQP-EFSQIDVEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           E+ D++   E+++  +F+       +S     + Y DA+  YG+DKPDLR  + +  V +
Sbjct: 240 EEKDVMQIAEDLILEIFKACGKS--ISYKIPHLDYMDAMECYGSDKPDLRFDMPLVEVAD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGG--GGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            FV S   +F +I        + A+  + G    +R     + ++ R+ G  GLAYI  +
Sbjct: 298 LFVSSNNDIFKEIALDTKANRIKALCVRDGDSKFSRKSLADLEKFVRNFGAKGLAYIQVK 357

Query: 363 LD------ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +      ES + +  GP+ K L   + +A+  R+  + GD  FF AG+      +    
Sbjct: 358 EECKSFDRESIDESLKGPLTKFLTEDSIQALLQRVGAKKGDIIFFGAGEKHVVWDYMGRL 417

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +A +L +I  +   F W+++FP +E  +E   I   H+PFTMP+   E    +D+ S
Sbjct: 418 RLEVANQLNLICADKLSFVWVVNFPMFEKTDE--GIKALHHPFTMPKNIDE----SDIES 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I++  YD+V NG E+  G IR H SE+  + F  + ISKE    +FG L  A Q G PPH
Sbjct: 472 IQSIAYDIVLNGVELGGGSIRIHKSEIQSKIFDLLQISKEEANEKFGFLLEALQYGTPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GG A G DR+VMLL GA ++REV  FP +Q    LLM +PS+V+  QL EL +++
Sbjct: 532 GGFAIGFDRLVMLLSGATSIREVIAFPKTQKASCLLMEAPSSVTTLQLNELHIKL 586


>gi|149369610|ref|ZP_01889462.1| aspartyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149357037|gb|EDM45592.1| aspartyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 586

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 220/598 (36%), Positives = 336/598 (56%), Gaps = 17/598 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACF 59
            YRTH+ G+L  S+ G  V L+GWV + R  G I+++D+RD YGITQ+V + +       
Sbjct: 1   MYRTHNNGELRASNAGQEVTLAGWVQKSRDKGFIVWVDLRDRYGITQLVFDEERTPKEMM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +  E+V+ + G V+ R  E+ N  + TG IE+  +++ +L+ +   P  +  + +
Sbjct: 61  EKASKLGREFVIQVTGEVIER--ESKNPKMPTGDIEILVKEVTVLNESLTPPFTIEDDTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR+ + +N++ R ++  ++R  +  E F++  TP L  S+PEGARD
Sbjct: 119 GGEDLRMKYRYLDIRRNPVRENLIFRHKVSMAVRNYLSNEGFVDVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGQFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+F+EQ+DILN  E + R + +E +       +F R+ YDDA+R YG DKPD+R  +  
Sbjct: 238 EMAFIEQEDILNMFEGLTRHLLKEINGVEI--GDFPRMQYDDAMRLYGNDKPDIRFDMKF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             + E   H +F VF+    V            G    R   D + +W +      +  I
Sbjct: 296 GELNEVTQHKDFGVFNSAELVVG-----IAVPGGNKYTRKEIDNIIKWVKRPQVGAMGMI 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R ++ G  +    V K  +  +          + GD    ++G+  K  +  +  R H
Sbjct: 351 YSRCNDDG--SFKSSVDKFYDQDDLAKWAEVTGAKAGDLVCVLSGETNKVRAQMSALRMH 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A ELG+ +   F   W++DFP  E +EE       H+PFT P+ G   L  +    +KA
Sbjct: 409 LATELGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDSKPGEVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H  E       ++G S+E    +FG L  AF+ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKETQAIMLKHLGFSEEEARAQFGFLMDAFEYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+V +L G + +R+   FP + +  D+++ +P+ +  EQL EL L +  +PKK
Sbjct: 529 AFGLDRLVSILGGQETIRDFIAFPKNNSGRDVMIDAPAPLDKEQLDELNLML--SPKK 584


>gi|115374727|ref|ZP_01462004.1| aspartyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|310822725|ref|YP_003955083.1| aspartyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115368298|gb|EAU67256.1| aspartyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309395797|gb|ADO73256.1| Aspartyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 607

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 228/603 (37%), Positives = 337/603 (55%), Gaps = 16/603 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIA 62
            RTH+CG L    VG  V L GWV   R HGG +F+D+RD  G+TQVV  PD     E+A
Sbjct: 10  KRTHTCGQLTKEQVGQEVVLFGWVQNRRDHGGAVFIDLRDREGLTQVVFEPDAKEAHELA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R E+ + + G V+SR  + +N  + TG+IE+ A  + I + +E  P  +    E  E
Sbjct: 70  GQLRLEFCIGVRGKVISR-GKNVNPKMKTGEIEVKADALTIFNRSEPTPFLIEDSIETAE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R  +R+LDLRR  L ++++ R+++    R  M+   F+E  TP +   +P GAR+FLV
Sbjct: 129 DKRLAHRYLDLRRKPLQQSLMTRSKMNALTRAYMVENGFLELETPFMGKYTPGGARNFLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYAL ++PQ YKQL M +GFDRYFQI  CFRDED R DR P EF Q+D+EMS
Sbjct: 189 PSRLNPGKFYALAESPQLYKQLFMVAGFDRYFQIVKCFRDEDLRLDRQP-EFTQIDVEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV QDDI   +E +++ +++E    + V   F+R+ +D+++ +YG DKPDLR  +    +
Sbjct: 248 FVTQDDIFTIIEGLIQKLWKEVLGVD-VPTPFMRMNFDESMAKYGNDKPDLRFGLEHIVL 306

Query: 303 T----EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           T    EH       +  + +      +   IPA     +RA  D++ E+A+  G  GLA 
Sbjct: 307 TDLIREHGEGGGVPLIWEAVQHKGIVKAMVIPA-DKALSRAESDKLEEFAKQAGARGLAR 365

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                   G      P+AK ++    +AI    + + GD   F  G      +  A+ R 
Sbjct: 366 AKV---GEGGEWTQSPLAKTISPALRQAINQACNAKTGDLLLFQFGRESLVHTVMANLRV 422

Query: 419 HIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           H+A++LG+I        + F W+++ P +E++EE K    AH+ FT P  G       D 
Sbjct: 423 HVAKKLGLIPEYGSGGNWRFLWVVNPPLFEYDEESKTWAAAHHAFTRPHDGDVEYLLTDP 482

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             +K  +YD+V NGFEI  G IR H  +V  + F  +GI +E    +FG L  A + G P
Sbjct: 483 GRVKCHRYDVVLNGFEIGGGSIRLHDPKVQAEVFKALGIEEEEARMKFGFLLDALKYGAP 542

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+VMLL  A+++R+V  FP ++   DL+  +P  V   QL+E+ +R V  
Sbjct: 543 PHGGIALGMDRLVMLLTSAESLRDVIPFPKTKTGTDLMTSAPGDVDERQLKEIHVRSVPP 602

Query: 595 PKK 597
           P +
Sbjct: 603 PTQ 605


>gi|227505013|ref|ZP_03935062.1| aspartyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227198377|gb|EEI78425.1| aspartyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 596

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 232/598 (38%), Positives = 326/598 (54%), Gaps = 27/598 (4%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+L     G  V L+GWV R R HGG+IF+D+RD  GI QVV   +S   E A  +RSE
Sbjct: 2   AGELRKDIAGETVTLTGWVSRRRDHGGVIFIDLRDRSGIAQVVF-RESDVAERAHDLRSE 60

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYPESIR 125
           + + + G+V  R   + N N+ +G+IE++  ++E+L+ +  LP  +       E  E  R
Sbjct: 61  YCVKVTGVVEPRPEGSENPNLPSGEIEVNVSELEVLNKSAALPFQIDDPSTSGEVGEETR 120

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            KYR+LDLRR T    +  R+    + R  +   +F E  TP LT S+PEGARDFLVP+R
Sbjct: 121 LKYRYLDLRRKTQGDALRLRSEANRAAREVLARHDFTEIETPTLTRSTPEGARDFLVPAR 180

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           +  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV+
Sbjct: 181 LKPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFVD 239

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           QDD++   E ++  +++       ++    R+ Y DA++ YG+DKPDLR  I +   T+ 
Sbjct: 240 QDDVIALAEEIVSALWKLIG--YEITTPIPRMTYADAMKYYGSDKPDLRFGIKIVECTDF 297

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
           F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAYI     E
Sbjct: 298 FKDTTFRVFQN------EYVGAVVMEGGASQPRRQFDAWQEWAKQRGAKGLAYITIA--E 349

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G++   GPVAK++     E I   +  Q GD+ FF AGD     +    AR  IA++L 
Sbjct: 350 DGSLG--GPVAKNITDAEREGIAAHVGAQPGDAIFFAAGDTKSSRALLGAARGEIARKLD 407

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGMESLKGNDLL 475
           +I    + F W++D P +E   +            K    H+ FT P+         +  
Sbjct: 408 LIKDGDWAFTWVVDAPLFEPAADATASGDVALGHSKWTAVHHAFTSPKPEYLDSFDKEPG 467

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              A+ YD+VCNG EI  G IR H  +V  + F  +GI +E  + +FG L  AFQ G PP
Sbjct: 468 EALAYAYDIVCNGNEIGGGSIRIHQQDVQKRVFDVMGIGEEEAQEKFGFLLDAFQYGAPP 527

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           HGGIA G DRIV LL G  ++R+V  FP S    D L  +P  +   Q +E G+    
Sbjct: 528 HGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPGPIPAAQRKETGVDFKP 585


>gi|238854669|ref|ZP_04644999.1| aspartate--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664388|ref|ZP_05865240.1| aspartyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932940|ref|ZP_06338337.1| aspartate--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472206|ref|ZP_07812698.1| aspartate--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832459|gb|EEQ24766.1| aspartate--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260561453|gb|EEX27425.1| aspartyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281302975|gb|EFA95180.1| aspartate--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313449094|gb|EEQ68590.2| aspartate--tRNA ligase [Lactobacillus jensenii 1153]
          Length = 610

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 218/615 (35%), Positives = 347/615 (56%), Gaps = 18/615 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
            RT  CG++    +   V L GWV RVR  G +IF+D+RD  GI QVV N +S     + 
Sbjct: 3   KRTDYCGNITSQYLDQEVTLYGWVQRVRNLGNLIFIDLRDREGIVQVVVNHESGKDLMDK 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+ +E+V+ + G V+ RS  ++N  + TG++E+ A  I +L+ A+  P  +  +    
Sbjct: 63  ADSLGNEYVIEVKGKVVKRS--SVNPEMKTGEVEVDATTITVLNEAKNPPFEIKDDLNAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  + KYR+LDLRR TL + ++ R++I  ++     +E FI+  TP L  S+PEGARD+L
Sbjct: 121 EQTKLKYRYLDLRRSTLQRALITRSKITTAVHEFFDSEGFIDIETPDLGKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA CFRDED R DR P EF Q+DME 
Sbjct: 181 VPSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCFRDEDLRGDRQP-EFTQIDMET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+++  + +  E +L+ V  +    +       RI ++DA+  YG+DKPD+R  + + +
Sbjct: 240 SFLDEKGVQDITERLLQKVMHDVKGVDI-KLPLPRITWNDAMNYYGSDKPDMRFDMKIQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           + E F  S+F+VFS  ++     +  A+       +R   +   E+ +     GLA+  +
Sbjct: 299 LNEVFKDSDFKVFSGAIADGGFVKAIAVEGGAKAYSRKKIEEKQEYIKRFHAKGLAWAKF 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E G  +  GPV++ +     E ++   +++ G+   F+A      C      R  IA
Sbjct: 359 ---EDGEFS--GPVSRFITDSEAEQLKKIYNLKGGELLLFVADKWKVCCDALGYLRRSIA 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            EL +++ + + F W++D+P +E++E + +   AH+PFTMP      L   +     A  
Sbjct: 414 IELNMVSKDDYHFEWVVDWPLFEYDEGDDQWIAAHHPFTMPDDEGIKLLETEPHKAHARS 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD++ NG+E+  G IR H  ++ L+    +G +KE    +FG L  A   G PPH G+A 
Sbjct: 474 YDIILNGYELGGGSIRIHKKDIQLKMLKALGFTKEKAYEQFGFLLDALDMGFPPHAGLAI 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV-------EN 594
           G+DR  MLL G  N+R+V  FP + +  + +M +PS VS EQ+ ELG+ +        ++
Sbjct: 534 GLDRFAMLLTGKDNIRDVIAFPKTASASEPMMKAPSPVSDEQMAELGIEVTASARSVRDD 593

Query: 595 PKKILKISVTTILRN 609
            +K L+      +++
Sbjct: 594 NQKELEKEAEADIKD 608


>gi|257466069|ref|ZP_05630380.1| aspartyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917225|ref|ZP_07913465.1| aspartyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691100|gb|EFS27935.1| aspartyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 594

 Score =  587 bits (1513), Expect = e-165,   Method: Composition-based stats.
 Identities = 226/582 (38%), Positives = 342/582 (58%), Gaps = 14/582 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-- 61
           YR+H+ G+L   ++G  V LSGWV   R  GG+ F+D+RD  G TQ+V + D    EI  
Sbjct: 3   YRSHNLGELRKENIGQVVTLSGWVDTKRDLGGLTFIDLRDREGKTQIVFDIDYTNKEIIE 62

Query: 62  -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
            A+ +R+E V+ + G V  R+++  N NI TG+IE+  +++E+L+  + LP  + G E  
Sbjct: 63  TAQKLRNEAVIKVVGEVKERASK--NLNIPTGEIEVFVKELEVLNQCDVLPFQITGTEEN 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+IR KYR+LD+RR  + +N+  R R+I ++R  M    F++  TPILT S+PEGARD
Sbjct: 121 LSENIRLKYRYLDIRRPKMIQNLKMRHRMIMAIRNYMDQAGFLDVDTPILTKSTPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR+N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD+
Sbjct: 181 FLVPSRINGGTFYALPQSPQIFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLDV 239

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV QDD++N +E + + VF+  +     +  F R+ Y  A+  YG+DKPDLR  + +
Sbjct: 240 EMSFVTQDDVMNEIEGLAKYVFKNVTGEE-ANYTFERMPYAIAMGEYGSDKPDLRFEVKL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAY 358
            ++++    S F+ FS  +      +    P      +R       ++A+   G  G+AY
Sbjct: 299 KDLSDVVAKSSFKAFSATVENGGIVKAIVAPKAFEKFSRKVLGEYEDYAKQYFGAKGMAY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  ++ E+G ++   P+AK       +AI  R     GD    IA       +     R 
Sbjct: 359 I--KIAENGEIS--SPIAKFFQEDEMKAILERTGAGAGDVVLIIADRAKIVHAALGALRL 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLSI 477
            + +ELG+I+ N ++F W++DFP +E++EEE +    H+PFT + +  ME        +I
Sbjct: 415 RVGKELGLIDMNSYKFLWVVDFPMFEYDEEEGRYKAEHHPFTSIKEEDMEKFLAGQTDNI 474

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +   YDLV NG EI  G IR   +E+  + F  + +S E  + +FG    AF+ G PPHG
Sbjct: 475 RTNTYDLVLNGSEIGGGSIRISNTELQAKVFERLSLSPEEAKEKFGFFLDAFKYGAPPHG 534

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
           G+A GIDR +M++L  +++R+V  FP +     L+  +P  V
Sbjct: 535 GLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPGKV 576


>gi|160933302|ref|ZP_02080690.1| hypothetical protein CLOLEP_02147 [Clostridium leptum DSM 753]
 gi|156867179|gb|EDO60551.1| hypothetical protein CLOLEP_02147 [Clostridium leptum DSM 753]
          Length = 693

 Score =  587 bits (1513), Expect = e-165,   Method: Composition-based stats.
 Identities = 221/602 (36%), Positives = 335/602 (55%), Gaps = 10/602 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACF 59
             RT  CG L  ++V     + GWV   R  GG+IF+D+RD  GI QVV +  +     F
Sbjct: 1   MKRTSYCGALRETNVNQIHTVMGWVQNKRDMGGVIFIDLRDREGILQVVFDGRNLTPEAF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A++++ E V+ ++G +  R  ET N  ++TG IEL+A+K+E+LS A  LP  +     
Sbjct: 61  AAAEALKLESVIAVEGPLRIRGEETYNPKLVTGTIELAAKKLEVLSEAAALPFSMSEAGN 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YRFLDLRR  L  N+  R R+   +   +  + F++  TP+LT S+PEGARD
Sbjct: 121 VREELRLQYRFLDLRRPKLLNNLKFRHRLTKLIHDYLDGQGFLQVETPMLTKSTPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV+QG FYALPQ+PQ +KQLLM  G D+Y+QIA CFRDED R+DR P EF Q+DM
Sbjct: 181 YLVPSRVHQGMFYALPQSPQIFKQLLMVGGVDKYYQIARCFRDEDLRADRQP-EFTQVDM 239

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E+SFV+Q+DIL  +E + + +F E          F R+ +  A+ RYG+DKPDLR  + +
Sbjct: 240 ELSFVDQEDILEHLEKMFKHLFREALGVEFQE-PFPRLTWQQAMDRYGSDKPDLRFGLPI 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T+      F VF K +          +   G    R+  + + E A   G  G+A+I
Sbjct: 299 VDLTQQLKGCGFSVFRKAIDEGGMVRAVNVKGHGN-FTRSAIEELTEKALKLGAKGMAWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             + D          + K+ +    +++   +D + GD   F A      C      R  
Sbjct: 358 ALKDDG----EPYSILTKYFSQEEFQSLLDAVDGKPGDFILFCADQFSTVCRTLGGLRLE 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A  LG+     + F  + DFP +E+++EE +    H+PFTMP         +D   ++A
Sbjct: 414 LADMLGLRKPGDYRFLIVTDFPEFEYSQEEGRYLATHHPFTMPYPEDIPYLISDPARVRA 473

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+ SG +R H  +V  + F  +G S+E ++ RFG +  AFQ G PPHGG 
Sbjct: 474 QAYDVVLNGVELGSGSMRIHQKDVQRKMFEALGFSEEQIQERFGFMVNAFQYGTPPHGGF 533

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
           A G+DR+ M +L A+++R+V  FP +++    +  +P+ V  +QL  LGL  + + +   
Sbjct: 534 AFGLDRLAMQMLEAESLRDVIAFPKNKDAVCPMTQAPNVVDPQQLEVLGLAALLSKEGTG 593

Query: 600 KI 601
           K 
Sbjct: 594 KA 595


>gi|260061048|ref|YP_003194128.1| aspartyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785180|gb|EAR16349.1| aspartyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 583

 Score =  587 bits (1513), Expect = e-165,   Method: Composition-based stats.
 Identities = 216/597 (36%), Positives = 331/597 (55%), Gaps = 19/597 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YR+H+CG+L    +G  V L+GW  +VR  G ++++D+RD YGITQ+V + +     + 
Sbjct: 1   MYRSHTCGELREEHIGREVTLAGWAGKVRDKGFVVWIDLRDRYGITQLVFDQERTPAALL 60

Query: 63  KSVRSE---WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              R     +VL + G V+ R+++  N  + TG IE+  +++ +L+ AE  P  +  + +
Sbjct: 61  DQARETGREYVLQVKGNVIERASK--NPKLPTGGIEVLVEEMTVLNPAETPPFTIEDQTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + +R KYR+LD+RR+ +   ++ R  +   +R  +  + FIE  TP L  S+PEGARD
Sbjct: 119 GGDELRMKYRYLDIRRNPVKNKLMFRHTVTMEVRKYLSDQGFIEVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNAGEFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DIL   E + R + +  +  +  +  F R+ YD+AIRRYG+DKPD+R  +  
Sbjct: 238 EMAFVEQEDILRAFEGLTRHLLKAVNGVD--TGEFPRMTYDEAIRRYGSDKPDIRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             + E   H +F VF++   V                 R   D + +W +    G  G+ 
Sbjct: 296 GELNEVARHRDFNVFNQAELVVG-----IAVPGAASYTRKEIDALVDWVKRPQVGAKGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+    D     +    V K  +  +            GD    ++GD     S  +  R
Sbjct: 351 YVKCNDDG----SFKSSVDKFYSQEDLARWAEATGATPGDLICVLSGDAGTTRSQLSMLR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A  LG+ N   F   W+ DFP  E++EE  +    H+PFT P+ G   L  +D  ++
Sbjct: 407 MELAGRLGLRNPKEFAPLWVTDFPLLEFDEESGRYHAMHHPFTAPKPGQLELLDSDPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG EI  G IR H  +     F ++G ++     +FG L  AFQ G PPHG
Sbjct: 467 RANAYDLVLNGNEIGGGSIRIHDKKTQAVMFRHLGFTEAEARAQFGFLMDAFQYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           GIA G+DR+V +L G +++R+   FP + +  D+++ +P+ +  EQLREL L ++E+
Sbjct: 527 GIAFGLDRLVAILGGQESIRDYIAFPKNNSGRDVMIDAPAPLDAEQLRELHLGLLES 583


>gi|254882093|ref|ZP_05254803.1| aspartyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294777207|ref|ZP_06742663.1| aspartate--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319640898|ref|ZP_07995608.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|254834886|gb|EET15195.1| aspartyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294448921|gb|EFG17465.1| aspartate--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317387480|gb|EFV68349.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 587

 Score =  587 bits (1513), Expect = e-165,   Method: Composition-based stats.
 Identities = 227/600 (37%), Positives = 341/600 (56%), Gaps = 18/600 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            +R+H+CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N        E
Sbjct: 1   MFRSHTCGELRLSDAGKSVTLAGWVQRARKMGGMTFVDLRDRYGITQLVFNEAVNAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ I G V  RS +  N NI TG+IE+    + +L+ A   P  +    + 
Sbjct: 61  RANHLGREFVIQITGEVNERSNK--NMNIPTGEIEIIVSVLNVLNSAVTPPFTIEDNSDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR K+R+LDLRR+ + KN+  R ++   +R  + ++ F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKFRYLDLRRNCVRKNLELRHKMTMEVRRYLDSKGFLEVETPMLVGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI++T E + + +F+E      +S  FLR+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDIISTFEGMAKHLFKELRGVE-LSEPFLRMTWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     +                 R   D++ E+ +    G  G+ Y
Sbjct: 297 ELMDIMKGHGFSVFDDAAYIGG-----ICAEGAASYTRKQLDQLTEFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADAR 417
              R++  GNV     V K  +    + ++     + GD    ++G D +K      + R
Sbjct: 352 A--RVEADGNVK--SSVDKFYSQEVLQQMKEAFSAKPGDLILILSGPDAMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + ++LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  ++
Sbjct: 408 LEVGRQLGLRDKNKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVVNGVEVGGGSIRIHDSQLQAKMFEILGFTPERAQEQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+A G+DR V L  G  ++R+   FP + +  D+++ +P+ +   QL EL L +     K
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDQSQLDELNLVVDIKEDK 587


>gi|302520596|ref|ZP_07272938.1| aspartyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|318059207|ref|ZP_07977930.1| aspartyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318079388|ref|ZP_07986720.1| aspartyl-tRNA synthetase [Streptomyces sp. SA3_actF]
 gi|302429491|gb|EFL01307.1| aspartyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 587

 Score =  587 bits (1513), Expect = e-165,   Method: Composition-based stats.
 Identities = 293/597 (49%), Positives = 405/597 (67%), Gaps = 10/597 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +A FE
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAAFE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E VL +DG V+SR AE +N ++ TG +E+ A ++E+L  A  LP  +  E   
Sbjct: 61  TLDKLSKETVLRVDGKVVSRGAENVNPDLPTGAVEVEAGEVEVLGEAGPLPFTINAEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ RT +I ++R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRTAVIAAVRQKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGRFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +F EF  G  V++ F RI + +++ +YG DKPDLR  + +H
Sbjct: 241 MSFVEQEDVFQPVEKLMTELFTEFGGGREVTSPFPRIPFRESMLKYGNDKPDLRAQLELH 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++ F  S+F+ F+        +            +R F D++ E+A  QG  GLA++ 
Sbjct: 301 DISDVFASSDFKAFA------GKHVRALPVPDTAKQSRKFFDQLGEYAVEQGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G +A  GP+AK L   + +A+  RL +  G + FF AG+  +     +  R   
Sbjct: 354 -RVGEDGQLA--GPIAKFLTADDVKALTERLALAPGYAVFFGAGEFDEVSKIMSAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G      F FCW++DFP +E +EE  K DF+HNPF+MPQGGM++L+  D L I A+
Sbjct: 411 AKRAGHFEEGVFRFCWVVDFPMFEKDEETGKTDFSHNPFSMPQGGMDALEHKDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH   +ML+AF   G  +E VE+ F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGIELSSGAIRNHEPAIMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            GIDRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++ +  +K
Sbjct: 531 PGIDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELNIQLRKPVQK 587


>gi|325956620|ref|YP_004292032.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333185|gb|ADZ07093.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 605

 Score =  587 bits (1513), Expect = e-165,   Method: Composition-based stats.
 Identities = 221/600 (36%), Positives = 344/600 (57%), Gaps = 11/600 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT  CG++    +G  V L GWV RVR  G ++F+D+RD  G+ Q+V N DS     +IA
Sbjct: 7   RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKELMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E+VL + G V+ RS   +N ++ TGQ+E+ A +I IL+ A+  P  +    +  E
Sbjct: 67  DSLGNEYVLQVKGKVVKRSE--VNPDMKTGQVEVDATEIIILNKAKNPPFEIKNGVDISE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +++ I    E +L+ + ++    + +     RI + DA+ +YG+DKPD R  +++H++
Sbjct: 244 FADEETIQGYTEGLLKKIMKDVKGID-LKTPIKRITWTDAMNKYGSDKPDTRYGMLIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +  F  S+F+VFS  ++     +  A+       +R   D+  ++ +     GLA++ + 
Sbjct: 303 SSIFKDSDFKVFSGAIADGGFVKGIAVKNGAKEYSRKKLDKKADFIKRFHAKGLAWVKYE 362

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            DE       GPVA+ L   N EA++   D++ G+   F+A      C      R   A+
Sbjct: 363 DDE-----FSGPVARFLTDDNKEALKKEFDLEGGELVVFVADKWKVICDSLNHLRREFAK 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E GII    ++F W++D+P +E++E   +   AH+PFTMP      L   +     A  Y
Sbjct: 418 ETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHKAHARSY 477

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H   +    F  +G +K+    +FG L  A   G PPH G+A G
Sbjct: 478 DIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGLAIG 537

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           +DR  M+L    N+R+V  FP + +  + +M +P+ V+ +QL +LG+ + +  +  +K +
Sbjct: 538 LDRFAMMLANKDNIRDVLAFPKNASASEPMMHAPAPVADQQLADLGIEVEDKYQDSVKAT 597


>gi|325479560|gb|EGC82656.1| aspartate--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 582

 Score =  587 bits (1513), Expect = e-165,   Method: Composition-based stats.
 Identities = 210/593 (35%), Positives = 337/593 (56%), Gaps = 12/593 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           M   RT+ CGDL + +V   V L GWV + R  G ++F+D+RD  GITQ+V    DS  +
Sbjct: 1   MEFKRTNMCGDLRIENVNDSVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVVREEDSENY 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              + +  E+V+ + G V  R  E+ N +I TG IE+ A KI IL  A+  P+ +  + +
Sbjct: 61  AKTREISQEYVIEVRGKVSER--ESKNKDIPTGDIEIIADKINILDKAKTPPIYIKDDDD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E++R KYR+LD+R+ ++ +N+  R+ I+ ++R  M   +F E  TP LT  +PEGARD
Sbjct: 119 VSENLRLKYRYLDMRKPSVQRNLKLRSDIVRTIREYMYENDFTEVETPFLTKPTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+N G FYALPQ+PQ  KQ+LM    DRYFQ+  CFRDED R++R P EF Q+D+
Sbjct: 179 YLVPSRINSGKFYALPQSPQLLKQILMIGSLDRYFQVVKCFRDEDLRANRQP-EFTQMDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF  QDD++   E +L+ +F+++++ + +     R+ Y +A+  YG+DKPDLR    +
Sbjct: 238 EMSFSNQDDVIAMNEGLLKELFDKYTDYD-LKLPIDRMDYSEAMNSYGSDKPDLRYGYKI 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V+E FV S+F+VF+                  G  +R   D++ ++ +  G  GL+YI
Sbjct: 297 EDVSEVFVDSDFKVFADNTKDGKSVRALNFKGIAGNYSRKQLDKLTDFVKDYGLKGLSYI 356

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +      +      + K L       ++ +L+M+DGD     A             R  
Sbjct: 357 KY------SDEIQSSIKKFLTDDIISGLKEKLNMEDGDLILIGADKDRVVLEAMGALRRK 410

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A++  +I    +  CW+++FP +E++EEE +    H+PFTMP      L   +   ++ 
Sbjct: 411 VAKDNDLIEKE-YALCWVVNFPMFEYSEEEDRYVAQHHPFTMPNEDDIDLLLTEPEKVRT 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G +R + SE+  + F  + +S+E ++N+FG    A Q G PPH G+
Sbjct: 470 QAYDIVINGDEMGGGSVRINNSELQEKVFEALKLSEEDIKNKFGFFIEALQYGTPPHAGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR++ML     N++++  FP +Q+    L  +PS V  + L EL +++ 
Sbjct: 530 AYGLDRLLMLFAKTDNIKDIIAFPKTQSATCPLTEAPSIVDEKALNELNIKLK 582


>gi|289522219|ref|ZP_06439073.1| aspartate--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289504055|gb|EFD25219.1| aspartate--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 603

 Score =  587 bits (1513), Expect = e-165,   Method: Composition-based stats.
 Identities = 229/599 (38%), Positives = 336/599 (56%), Gaps = 14/599 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACF 59
           +  RT  CG+     +   V ++GWV + R  GGIIFL+I DH G+ QVV NP+   +  
Sbjct: 14  NWKRTVYCGNATEDHIEKKVVINGWVRKRRDLGGIIFLEIWDHTGLVQVVINPETSESVH 73

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E AK +RSE+V+ I G+V  R A T N ++ TG +E+ A  + +LS +   P  +     
Sbjct: 74  ERAKQLRSEYVVAIKGVVKKRPAGTENPSLKTGNVEIIADDLMVLSPSTLPPFDLNEASA 133

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+IR KYR+LDLRR+ + +N+  R++  N  R  +    F+E  TP+LT S+PEGARD
Sbjct: 134 IDENIRLKYRYLDLRREVMQRNLRLRSKAANYTRTFLTDAGFVEVETPMLTKSTPEGARD 193

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN G FYALPQ+PQ +KQ+LM SG DRYFQI  CFRDED R+DR P EF Q+D+
Sbjct: 194 YLVPSRVNPGKFYALPQSPQIFKQILMISGLDRYFQIVKCFRDEDLRADRQP-EFTQIDI 252

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ ++DI   +E+ ++G+F E          F R+ Y +A+ R+G+DKPDLR P  +
Sbjct: 253 EMSFLTEEDIFELIEDYMKGLFRETIGVEI-QTPFPRLSYSEAMERFGSDKPDLRIPFEI 311

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++   F     R F   +      + + +P  G   +R     +   A+  G  GLAY 
Sbjct: 312 VDLKAVFQGRGIRAFE--VGERGAIKGFVLP-GGASLSRQEMSTIEGKAKELGAKGLAYF 368

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCF-FIAGDPLKFCSFAADARN 418
                        GP+ K L+    + +  +  +  G++ F     D  K C      R 
Sbjct: 369 QL------GNELKGPMVKFLDEDGKKLVIEKSQLFQGNALFVMADQDRNKVCEVLGQLRL 422

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A++  +I    + F W++DFP +EW+E E +    H+PFT P+     L  ++   ++
Sbjct: 423 EVARKYDLIEKGKWAFLWVVDFPLFEWSETENRYVSVHHPFTSPKNEDLYLLESEPWKVR 482

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H  +V    F  +G+ +   +NRFG L  A   G PPHGG
Sbjct: 483 SRAYDIVLNGNEVGGGSIRIHDPKVQESVFKALGLDEVEAKNRFGFLLSALSYGTPPHGG 542

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           IA G DR+VMLL GAK++R+V  FP +Q    LL G+PS V   QL EL +++    ++
Sbjct: 543 IALGFDRLVMLLAGAKSIRDVIAFPKTQKAQCLLSGAPSYVDERQLEELHIKVTATDEE 601


>gi|257469474|ref|ZP_05633566.1| aspartyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317063718|ref|ZP_07928203.1| aspartyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313689394|gb|EFS26229.1| aspartyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 595

 Score =  587 bits (1513), Expect = e-165,   Method: Composition-based stats.
 Identities = 219/600 (36%), Positives = 336/600 (56%), Gaps = 15/600 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           Y+TH+ G+L   ++G  V LSGWV   R  GG+ F+D+RD  G TQV+ + D       E
Sbjct: 3   YKTHNLGELRKENIGQEVILSGWVDTKRDLGGLTFVDMRDREGKTQVIFDIDVAPKDVVE 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
            A+ +++E V+ I G V  R ++  N N+ TG IE+ A+++ +L+  + LP  + G +  
Sbjct: 63  QAQKLKNESVIRIVGEVKERQSK--NPNMPTGDIEVFAKELTVLNSCDVLPFQISGIDDN 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+IR KYR+LD+RR  +  N+  R ++I ++R  M  E F++  TP+LT S+PEGARD
Sbjct: 121 LNENIRLKYRYLDIRRSRMLHNLKMRHKMIMAIRNYMDKEGFLDIDTPLLTKSTPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP R++ G FYALPQ+PQ +KQLLM  G +RYFQ+A CFRDED R+DR   EF QLD+
Sbjct: 181 FLVPCRISPGDFYALPQSPQLFKQLLMIGGIERYFQLAKCFRDEDLRADRQ-FEFVQLDI 239

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV  +D++ T+E + + VF   +    V+  F ++ Y +A+ R+G+DKPD+R  + +
Sbjct: 240 EMSFVTMEDVMRTIEGLAKDVFTAITGEE-VNYTFQKMPYAEAMSRFGSDKPDIRFGVEL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAY 358
            ++TE   +S F+ F + ++     +    P      +R       E A+   G  G+AY
Sbjct: 299 KDLTEIVRNSGFKAFQETVANGGIVKAVVAPQGAERFSRKIIGEYEEHAKRYFGAKGMAY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I              P+AK L+    +AI        GD    IA             R 
Sbjct: 359 IKIT-----EEGINSPIAKFLSEDEMKAIVETTGAVKGDIILIIADKAKVVYGALGAIRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME-SLKGNDLLSI 477
            I +E  +IN + F+F W++DFP ++++EEEK+    H+PFT  +     +       +I
Sbjct: 414 RIGKEFNLINPDEFKFLWVVDFPMFQYDEEEKRYKAEHHPFTSIKDEDLNAFLNGQTENI 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +   YD+V NGFEI  G IR    E+  + F  +G++ E  + +FG    AF+ G PPHG
Sbjct: 474 RTNTYDMVLNGFEIGGGSIRIFNPEIQSKVFDRLGLTPEEAKTKFGFFLDAFKYGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+A G+DR +M++L   ++R+V  FP +     L+  +P  V   QL EL L+     +K
Sbjct: 534 GLAFGLDRWLMVMLKENSIRDVIPFPKTNKGQCLMTEAPGEVDDGQLEELYLKSTYVEEK 593


>gi|307565634|ref|ZP_07628112.1| aspartate--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307345666|gb|EFN91025.1| aspartate--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 585

 Score =  587 bits (1513), Expect = e-165,   Method: Composition-based stats.
 Identities = 220/595 (36%), Positives = 339/595 (56%), Gaps = 20/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT +CG+L ++D G  V LSGWV R R  GG+ F+D+RD YGITQ+V N   ++   E
Sbjct: 1   MYRTKTCGELRLTDTGKEVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEADNADLCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ + I G+V  R ++  N  I TG IE+  +++ +LS A   P  +    + 
Sbjct: 61  EANKLGREYCVQIKGIVNERHSK--NNKIDTGDIEIIVKELNVLSPALTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + KNI  R ++   +R  + +++FIE  TPIL  S+PEGARDF
Sbjct: 119 GDELRMKYRYLDLRRAAVRKNIELRHKMTIMIRNFLDSQDFIEVETPILIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMIAGFDRYFQIAKCFRDEDLRADRQP-EFTQVDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q+D++N  E + R +F E            ++ + +A++ +G+DKPDLR  +   
Sbjct: 238 MSFVDQNDVINMFEEMCRVLFREIRGVELPKL--EQMPWAEAMKCFGSDKPDLRFGMEFV 295

Query: 301 N-VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             + +     EF VF++   +        +       +R   + + ++ +    G  GL 
Sbjct: 296 ELINDLKGTGEFSVFNEANYIGG-----IVVPGCASYSRKQLNELTDFVKRPQIGAQGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADA 416
           +I +  D          + K   +   + ++      DGD    ++GD P K  +     
Sbjct: 351 FIKYNTDG----TIKSSIDKFYTLDQLQKVKKTTGANDGDLVLILSGDKPNKVRTQLCSL 406

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP      L       
Sbjct: 407 RLEMGDRLGLRDKNVFKCLWIIDFPLFEWSDEEQRLMATHHPFTMPNPEDLPLLEEHPEQ 466

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G IR H +++  + F ++G +KE  E +FG L  AF+ G PPH
Sbjct: 467 VRALAYDFVCNGIEVGGGSIRIHDTQLQERMFKHLGFTKERAEEQFGFLMNAFKYGAPPH 526

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR V ++ G  ++R+   FP + +  D+++ +PST+   QL EL +++
Sbjct: 527 AGLAFGLDRFVSIMAGLDSIRDCIAFPKNNSGRDVMLDAPSTLDKTQLDELQIKL 581


>gi|308182777|ref|YP_003926904.1| aspartyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308064962|gb|ADO06854.1| aspartyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 577

 Score =  587 bits (1512), Expect = e-165,   Method: Composition-based stats.
 Identities = 225/591 (38%), Positives = 343/591 (58%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKSVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLHAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+     +T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQEIFKAIG--HTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFIDSSNSIFSNIAQDPKNQRIKALNVKGADALFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  R D Q GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+     ++  DL  I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKN----IECKDLEEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|296117812|ref|ZP_06836395.1| aspartate--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295969043|gb|EFG82285.1| aspartate--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 618

 Score =  587 bits (1512), Expect = e-165,   Method: Composition-based stats.
 Identities = 231/611 (37%), Positives = 333/611 (54%), Gaps = 27/611 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L     G  V L+GWV R R HGG+IF+D+RD  G+ Q V   +S   E A  
Sbjct: 18  RTHLAGELRKELTGETVTLTGWVSRRRDHGGVIFIDLRDRSGLAQAVF-RESEVAEQAHE 76

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---REYP 121
           +RSE+V+ + G+V +R   + N N+ +G+IEL+  ++E+L+ +  LP  +       E  
Sbjct: 77  LRSEFVVRVTGVVEARPEGSENPNLASGEIELNVTELEVLNKSAALPFQIDDPSTSGEVG 136

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R +YR+LDLRR      +  R+    + R  +    F E  TP LT S+PEGARDFL
Sbjct: 137 EEARLRYRYLDLRRKAQGDALRLRSAANRAARRVLDNHEFTEIETPTLTRSTPEGARDFL 196

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  GS+YALPQ+PQ +KQLLM +G +RY+Q+A C+RDED R+DR P EF QLD+EM
Sbjct: 197 VPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQLARCYRDEDFRADRQP-EFTQLDVEM 255

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D++   E ++  +++       ++    R+ Y DA++ YG+DKPDLR  I +  
Sbjct: 256 SFVDQEDVIALGEEIIAELWKLIG--YEITTPIPRMTYADAMKYYGSDKPDLRFDIKLVE 313

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            T+ F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAYI  
Sbjct: 314 CTDFFKDTTFRVFQN------EYVGAVVMEGGASQPRRQFDAWQEWAKQRGAKGLAYIT- 366

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E G +   GPVAK++     E I   +  + GD+ FF AGD     +    AR  IA
Sbjct: 367 -VAEDGTLG--GPVAKNITDAEREGIAEHVGAKPGDAIFFAAGDTKSSRALLGAARGEIA 423

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKG 471
           ++  +I    + F W++D P +E   E                 H+ FT P+        
Sbjct: 424 RKNDLIKEGDWAFTWVVDAPMFEPAAEATASGDVALGNSSWTAVHHAFTSPKPEWLDSFD 483

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ++     A+ YD+VCNG EI  G IR H +EV  + F+ +GI +E  + +FG L  AFQ 
Sbjct: 484 DNPGEATAYAYDIVCNGNEIGGGSIRIHNAEVQKRVFNVMGIGEEEAQEKFGFLLDAFQY 543

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G DRIV LL G  ++R+V  FP S    D L  +P+ +  +Q +E G+  
Sbjct: 544 GAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPAPIPAQQRKETGVDF 603

Query: 592 VENPKKILKIS 602
                K  +  
Sbjct: 604 KPEKAKSKEED 614


>gi|313902374|ref|ZP_07835777.1| aspartyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467305|gb|EFR62816.1| aspartyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 615

 Score =  587 bits (1512), Expect = e-165,   Method: Composition-based stats.
 Identities = 236/590 (40%), Positives = 335/590 (56%), Gaps = 8/590 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R   CG++    VG  + ++GWVHRVR  GG+ F+++RD  G  Q+V N   A  E+   
Sbjct: 28  RDLGCGEVRPEHVGRTLTVAGWVHRVRDLGGLRFVEVRDRTGRLQLVINRAEAPPEVVQA 87

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +R+E+V+   G V  R+ E +N  + TG++EL   ++ IL+ ++  P  +    E  
Sbjct: 88  AEGLRAEFVVAARGTVRRRAPEAVNPRLATGEVELVPAQLWILATSKTPPFELDAAAEVD 147

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +YR+LDLRR  + +N+  R R    +R       F+E  TP+LT S+PEGARD+L
Sbjct: 148 EGLRLRYRYLDLRRPAMFRNLWLRHRAYQVVRRYFDRNGFLEVETPMLTRSTPEGARDYL 207

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ G FYALPQ+PQ +KQLLM  G +RYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 208 VPSRLHPGRFYALPQSPQLFKQLLMVGGIERYFQIVRCFRDEDLRADRQP-EFTQIDVEM 266

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+L   E ++  +++E      V     R+ Y +A+ RYG+DKPDLR   ++ +
Sbjct: 267 SFVDVDDVLAMAEGMMAELWQELLGVE-VPLPLPRLTYAEAMARYGSDKPDLRYEPVVVD 325

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V++ FV + FR F   L+          P  G   +R   D +NE AR+ G PG+A+I  
Sbjct: 326 VSDVFVQTGFRGFQAALASGGAVRALRAP-GGAALSRKELDALNETARAAGSPGVAWIAV 384

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E    A  GPV K        A+  RL+++ GD     A +P +        R  +A
Sbjct: 385 P--EPDPEAWRGPVVKFFTPEERAALAGRLELRAGDLVLLAADEPERASVVLGKLRLQLA 442

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L       + F W++DFP  EW+EEE++    H+PFT P+        +D   ++A  
Sbjct: 443 ERLAWPRVKEWAFTWVVDFPLLEWDEEEQRYVARHHPFTSPRDEDLDRLESDPAGVRARA 502

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+EI  G IR H  +V  + F  +G+  E    RFG L  AF  G PPHGGIA 
Sbjct: 503 YDLVLNGYEIGGGSIRIHRRDVQERVFRAIGLPPEKARERFGFLLEAFDYGPPPHGGIAF 562

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DRIVML  GA ++R+V  FP +    D L G+P+ V   QL EL LRI
Sbjct: 563 GFDRIVMLAAGASSIRDVIAFPKTARAVDPLTGAPAEVDPGQLEELHLRI 612


>gi|124005873|ref|ZP_01690711.1| aspartyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123988556|gb|EAY28197.1| aspartyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 594

 Score =  587 bits (1512), Expect = e-165,   Method: Composition-based stats.
 Identities = 222/605 (36%), Positives = 341/605 (56%), Gaps = 22/605 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61
           RTH+CG+L +  VG  V L GWV + R  GG+IF+DIRD YG+TQ+ A+    D    E 
Sbjct: 3   RTHTCGELRIDHVGQKVTLCGWVQKNRDKGGLIFVDIRDRYGVTQLQADETNTDDQVVER 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            + +  E+V+   G V+ R+++  N  + TG +E+    IEIL+ A+  P  +  + +  
Sbjct: 63  LRQLGREFVVYATGNVIERASK--NPQMPTGDVEVQVTDIEILNEAKVPPFLIEDDTDGG 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R +YR+LDLRR+ + + +  R +I   +R  +  ++FIE  TP+L  S+PEGARDF+
Sbjct: 121 DELRMQYRYLDLRRNVVRQKLELRNQINREVRNFLDTQDFIEVETPVLIKSTPEGARDFV 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N+G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D EM
Sbjct: 181 VPSRMNEGQFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDCEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV ++DIL+T E ++R +F+     +        + YDDA+R YG+DKPD R  +    
Sbjct: 240 SFVTREDILSTFEGLIRHLFKTVKGVDLPEV--PVMEYDDAMRLYGSDKPDTRFGMEFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAYI 359
           + +   +  F+VF                      +R   D +  + +    G  GL Y+
Sbjct: 298 LNDVAQNKGFKVFDDA----QLVVGICAKGIAEEYSRKKIDELTNFVKRPQIGAKGLVYV 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  D     +    V K  +  + +   V+++++ GD    ++G+         + R  
Sbjct: 354 KYNKDG----SFKSSVDKFYSQEDLKEWAVKMNVEPGDMLLVLSGNTNTVRKQLNELRLE 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND--LLSI 477
           +   LG+ +   F   W++DFP  E +EE  K    H+PFT P+ G E+L  ND  L +I
Sbjct: 410 MGNRLGLRDPQKFSALWVVDFPLLEQDEETGKWHAMHHPFTSPKAGQEALLENDSQLANI 469

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA  YD+V NG E+  G IR +   +  +  S +G + E  + +FG L  AF+ G PPHG
Sbjct: 470 KANAYDMVINGVELGGGSIRIYQRPMQEKMLSLLGFTPEEAKAQFGFLMDAFEYGAPPHG 529

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR--IVENP 595
           GIA G DRI  +  G  ++R+   FP + +  D+++ +PS +  EQL ELGL+  +VE  
Sbjct: 530 GIAFGFDRICAVFGGVDSIRDFIAFPKNNSGRDVMINAPSAIDNEQLTELGLKLNLVEAE 589

Query: 596 KKILK 600
           +K+ +
Sbjct: 590 EKVTE 594


>gi|296129655|ref|YP_003636905.1| aspartyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296021470|gb|ADG74706.1| aspartyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 591

 Score =  587 bits (1512), Expect = e-165,   Method: Composition-based stats.
 Identities = 235/608 (38%), Positives = 338/608 (55%), Gaps = 28/608 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G L    +G+ V L+GWV R R HGG+ F+D+RD  GI QVV   ++    +A  
Sbjct: 3   RTHTAGSLRAEHIGTTVTLTGWVDRRRDHGGVAFVDLRDASGIAQVVVRDEA----VAHG 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREYPE 122
           +R+E+VL + G V  R     N N+ TG++E+ A ++ +L+ +  LP  V    + +  E
Sbjct: 59  LRAEYVLQVTGEVGRRPEGNENPNLATGEVEVVAHEVVVLNESAPLPFQVSASVDEQPGE 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R ++R+LDLRR      I  R ++  + R  +    F+E  TP LT S+PEGARDF+V
Sbjct: 119 EARLRHRYLDLRRQGPAHAIRLRAQVNRAARAVLDERGFVEVETPTLTRSTPEGARDFVV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+E S
Sbjct: 179 PARLAPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQP-EFTQLDVEAS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+QDD++   E+VL  +++       +     R+ Y DA+RRYGTDKPDLR  + + ++
Sbjct: 238 FVDQDDVIELAESVLTSLWDLIG--YAIPTPIPRMTYADAMRRYGTDKPDLRFGLELTDL 295

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE+F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   
Sbjct: 296 TEYFAGTPFRVFQSP------YVGAVVQPGGASTPRRGFDAWQEWAKQRGAKGLAYVT-- 347

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G +   GPVAK+++      +   +  Q GD+ FF AG   +  +    AR  I +
Sbjct: 348 VGEDGELG--GPVAKNISDAERAGLAAAVGAQPGDAVFFAAGKATEARALLGAARLEIGR 405

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEE-------KKIDFAHNPFTMPQGGMESLKGNDLL 475
             G+I+ + + F W++D P ++   E+             H+ FT P          D  
Sbjct: 406 RGGLIDEDAWSFVWVVDAPLFKPTGEDDDVAVGAGAWTAVHHAFTSPTPEWVDRFEEDPG 465

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           +  A+ YD+VCNG EI  G IR H  +V  + F  +GI +   + +FG L  AFQ G PP
Sbjct: 466 AALAYAYDIVCNGNEIGGGSIRIHRRDVQQRVFQVMGIGEAEAQEKFGFLLDAFQFGAPP 525

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G DRIV LL  + ++REV  FP S    D L G+P+ +SVEQ RE G  +   P
Sbjct: 526 HGGIAFGWDRIVTLLTRSDSIREVIAFPKSGGGYDPLTGAPAPISVEQRRETG--VDAKP 583

Query: 596 KKILKISV 603
           K    +  
Sbjct: 584 KAAASVPA 591


>gi|118474727|ref|YP_892354.1| aspartyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|166225333|sp|A0RQ71|SYD_CAMFF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|118413953|gb|ABK82373.1| aspartyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 584

 Score =  587 bits (1512), Expect = e-165,   Method: Composition-based stats.
 Identities = 237/597 (39%), Positives = 333/597 (55%), Gaps = 18/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H C DL  +D+G  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P    +  EI 
Sbjct: 2   RSHYCTDLSSNDIGKKVQLCGWVNSYRDHGGVIFIDLRDRTGIIQLVCDPKDSKSAHEIG 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL   G + +R    IN  + TG+IE+   ++ I + +      V G+    E
Sbjct: 62  SKVRDEYVLKATGTIRARGEGLINPKLKTGEIEVIVDELYIENES-AALPFVIGDPNVGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLDLR          R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 DIRLKYRFLDLRNTESFDKFKLRSKASIACRNALDRLGFLEVETPILTRATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+YFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVYPGSFYALPQSPQLFKQLLMCAGFDKYFQIARCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+D++   E +L+ +F  ++ G+ +   F R+ Y DA+  YG DKPDLR  + M +V
Sbjct: 240 FCTQEDVIKVGEEILKDIF--YACGHDIITPFRRMEYKDAMETYGNDKPDLRFDLPMVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +FS            AI   GG    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFAKSNNEIFSTPAQNIKKNRAKAIKVPGGDNIFSKRQMQRFEEFVRKFGAKGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K       + +  R +++ GD  FF  GD      +    R  +
Sbjct: 358 VKED-----GLKGPLVKFFEQEQIDELIKRCELKVGDVVFFGIGDKKTVLDYMGRFRAFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ELGII+ N  EF W+++FP +E N++       H+PFTMP    E     DL  I + 
Sbjct: 413 ANELGIIDENKLEFLWVVNFPMFEQNDD-GSYSAMHHPFTMPNNPDE----EDLEDITSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I +     +FG L  A   G PPHGG A
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLKIDEAEQREKFGFLLDALSFGAPPHGGFA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR++ML+  + ++R+V  FP +Q     +  +PS VS EQLRELGLR+     K
Sbjct: 528 IGLDRLIMLVTKSASIRDVIAFPKTQRASCPMTKAPSNVSNEQLRELGLRLKGKETK 584


>gi|269977312|ref|ZP_06184285.1| aspartyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|269934615|gb|EEZ91176.1| aspartyl-tRNA synthetase [Mobiluncus mulieris 28-1]
          Length = 595

 Score =  587 bits (1512), Expect = e-165,   Method: Composition-based stats.
 Identities = 227/599 (37%), Positives = 333/599 (55%), Gaps = 32/599 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH CG+L + +    V L+GWV R R HGG+ F+D+RD  GI Q+V + D     + + 
Sbjct: 3   RTHKCGELTLKNDMETVTLTGWVDRRRDHGGVAFMDLRDASGIVQLVVSED-----VVRE 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----REY 120
           VR+E+VL + G V  R     N  I TG+IE+ A+ +E+L+    LP  V        + 
Sbjct: 58  VRNEYVLKVTGKVRKRPDGNDNPEISTGEIEVVAEDVEVLNPCAPLPFQVSEHAEEAGKV 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YRF+DLRR  LH N+V R +I +  R  M    F+E  TP LT S+PEGARDF
Sbjct: 118 GEDVRLRYRFVDLRRRQLHDNLVLRAKISSVARRVMEKHEFLEIETPTLTRSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R+  GS+YALPQ+PQ +KQLLM  G +RY+Q+A C+RDED R+DR P EF QLD+E
Sbjct: 178 VVPARIKPGSWYALPQSPQLFKQLLMVGGMERYYQLARCYRDEDSRADRQP-EFTQLDLE 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++   E++L+ V+        +     R+ + +A+ +YG+DKPDLR    + 
Sbjct: 237 MSFVDQDDVMAVTEDLLKEVWAVIG--YDLKTPIPRMPFKEAMDKYGSDKPDLRFGYELV 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +TE+F  + F++F         Y    +   G    R   D+  EWA+++G  GLAY+ 
Sbjct: 295 ELTEYFSDTPFKIFQAP------YVGAVVMPGGAAQPRRTFDKWQEWAKARGAKGLAYVT 348

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GPVAK+++    E +      + GD  FF AG+          AR  I
Sbjct: 349 IAEDG----TTAGPVAKNISDTEREGLAEVTGAKPGDCIFFAAGERTASQELLGAARLEI 404

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWN---EEEKK-------IDFAHNPFTMPQGGMESLK 470
            +  G+I+   + F W++D P ++ +   E E             H+ FT P+       
Sbjct: 405 GKRCGLIDPKAWAFTWVVDAPLFKPSGQAEAEGDVALGHSAWTAVHHAFTSPKPECMDTF 464

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  S  A+ YD+VCNG E+  G IR H  +V  + F  +G S E  + RFG L  AF+
Sbjct: 465 DTDPGSALAYAYDIVCNGVELGGGSIRVHRRDVQERIFKVMGFSPEEAQARFGFLLDAFK 524

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            G PPHGG+A G DRI  +L  + ++R+V  FP + +  D L G+P+ ++ EQ +E G+
Sbjct: 525 YGAPPHGGLALGWDRIAGMLTASPSIRDVIAFPKAGDGFDPLTGAPAPITDEQRKETGV 583


>gi|86134611|ref|ZP_01053193.1| Aspartyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821474|gb|EAQ42621.1| Aspartyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 584

 Score =  587 bits (1512), Expect = e-165,   Method: Composition-based stats.
 Identities = 219/592 (36%), Positives = 337/592 (56%), Gaps = 15/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
            YR+HSCG L  S + + V L+GWV + R  G ++++D+RD YGITQ++ + +    +I 
Sbjct: 1   MYRSHSCGALRASHINTEVTLAGWVQKSRDKGFMVWVDLRDRYGITQLIFDEERTSKDII 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             AKS+  E+V+ + G V+ R  E+ N  + TG++E+   ++EIL+ A+  P  +  + +
Sbjct: 61  EKAKSLGREFVIQVKGTVIER--ESKNDRLATGEVEVLVTELEILNEAKLPPFTIEDKTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR KYR+LD+RR+ +  +++ R ++   +R  +  + FIE  TP L  S+PEGARD
Sbjct: 119 GGEDIRMKYRYLDIRRNPVKDSLIFRHKVTMEVRKYLSDQEFIEVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DILN  E + R + +E +        F R+ +DDA+R YG DKPD+R  +  
Sbjct: 238 EMAFVEQEDILNIFEGLTRHLLKEINGVEVDK--FPRMLFDDAMRLYGNDKPDIRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +     H +F+VF+    V     +      G    R   D + +W +      L  I
Sbjct: 296 GELNAVTQHKDFKVFNDAELV-----IGIAVPGGNAYTRKEIDNIIKWVKRPQVGALGMI 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R++E G  +    V K  N  +          + GD    ++G+  K  +  +  R  
Sbjct: 351 YCRVNEDG--SFKSSVDKFYNQEDLAKWVEVTGAKPGDLVCVLSGETNKVRAQMSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ LG+ +   F   W++DFP  E +EE       H+PFT P+ G   L  +    +KA
Sbjct: 409 LAERLGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDSKPGEVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H          ++G S+E  + +FG L  AF+ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKATQATMLKHLGFSEEEAKAQFGFLMDAFEYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+V +L G + +R+   FP + +  D+++ +P+ +  EQL+EL L++
Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAFIDDEQLQELSLKL 580


>gi|225871427|ref|YP_002747374.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|254781752|sp|C0MB16|SYD_STRE4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225700831|emb|CAW95543.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 582

 Score =  587 bits (1512), Expect = e-165,   Method: Composition-based stats.
 Identities = 218/592 (36%), Positives = 336/592 (56%), Gaps = 17/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++ 
Sbjct: 1   MKRSMYAGHVRKEHIGRTIVLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEDVSGDVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +RSE+V+ ++G V +R     N  + TG +EL    + IL+ A+  P  +    E
Sbjct: 61  ATAERLRSEYVIEVEGSVEARQ--QANDKLATGAVELKVSGLTILNTAKTTPFEIKDGVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + ++   R +  + +R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDDTRLRYRYLDLRRPEMLESFKLRAKTTHVIRNYLDNLGFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR++QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRISQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V ++      V   F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDIVEGMIAKVMKDTKGIE-VKLPFPRMAYDDAMNHYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T+     +F+VFS+  +V        +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTDLVKEIDFKVFSEAQAVK----AIVVKGHADRYSRKDIDKLTEFAKQFGAKGLAWL 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                        GP+AK L       +   L ++  D   F+A       +     R  
Sbjct: 353 KVVDGA-----FTGPIAKFLTG-VKSKLTESLQLEHNDLVLFVADTLEVANNTLGALRTR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +I+ + F F W++D+P +EW+EEE++   AH+PFT+P          DL  ++A
Sbjct: 407 IAKELDMIDMSQFNFLWVVDWPMFEWSEEEERYMSAHHPFTLPTAESAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G + E    +FG L  A + G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDMQERMFRALGFTAEEANEQFGFLLEAMEYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL G  N+REV  FP +    D +  +PS VS +QL EL L+I
Sbjct: 527 AIGLDRLVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEKQLEELQLQI 578


>gi|322379215|ref|ZP_08053606.1| aspartyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322379713|ref|ZP_08054026.1| aspartyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147862|gb|EFX42449.1| aspartyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148355|gb|EFX42864.1| aspartyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 602

 Score =  587 bits (1512), Expect = e-165,   Method: Composition-based stats.
 Identities = 229/597 (38%), Positives = 339/597 (56%), Gaps = 19/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT  C ++G+ D+   V+L GW H  R HGG+IF+D+RD  G+ Q+V +P+S  +E    
Sbjct: 22  RTQLCAEVGLVDLKKSVKLCGWCHNYRDHGGVIFIDLRDKSGLVQLVCDPNSKAYEQTSL 81

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR E VL ++G+V +R     N  + TGQIE+    + I S +   P+   G+    E +
Sbjct: 82  VRHEDVLIVEGVVRAREKGLENPKLKTGQIEVVLSHLCIESKSLTPPI-SIGDNSVNEDL 140

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLR    ++    R+++  ++R  + + +F+E  TP+L+ ++PEGARDFL+PS
Sbjct: 141 RLQYRYLDLRSTKAYEIFKMRSKVAKAVRDCLDSLDFLEIETPMLSKTTPEGARDFLIPS 200

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ G F+ALPQ+PQ +KQ+LM +G DRY+QI  CFRDED RSDR P EF Q+D+EMSF 
Sbjct: 201 RVHDGQFFALPQSPQLFKQILMVAGMDRYYQIVKCFRDEDLRSDRQP-EFTQIDVEMSFC 259

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            Q+D++   E +L+ VF        ++  F  + Y +A   YG+DKPDLR  + +  V +
Sbjct: 260 TQEDVIEVAETLLKAVFSCVG--VEITPPFKHLTYQEATESYGSDKPDLRFEMPLVEVGD 317

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            FV S   +F KI S +      A+  +GG    +R +     E+ R  G  GLAYI  +
Sbjct: 318 LFVDSSNEIFKKIASDSYNNRFKALRVEGGDRLLSRKYLSEAEEFVRQFGAKGLAYIQVK 377

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                     GP+ K ++    E +  R   + GD  FF AG+      +    R  + Q
Sbjct: 378 -----EEGAKGPLVKFISEAALETLLKRTQAKVGDILFFGAGEKKVILDYMGRLRLKLGQ 432

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +L +I+   F F W++DFP +E  E E K+  AH+PFTMP+             I++  Y
Sbjct: 433 DLNLIDSQAFNFLWVVDFPMFE--EVEGKLSAAHHPFTMPKN-----LEGKPTQIQSIAY 485

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H   +  + F  +GIS++  + +FG L  A Q G PPHGG A G
Sbjct: 486 DIVLNGVELGGGSIRIHKQAIQKEVFKILGISEQEAQEKFGFLLEALQYGAPPHGGFAMG 545

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV-ENPKKI 598
            DR++MLL    ++R+V  FP +Q    LL  +PS+ S EQLREL +R+    P KI
Sbjct: 546 FDRLIMLLAKVPSIRDVIAFPKTQKATCLLSKAPSSASEEQLRELHIRLRNPKPSKI 602


>gi|257452137|ref|ZP_05617436.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317058682|ref|ZP_07923167.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684358|gb|EFS21193.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 594

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 225/582 (38%), Positives = 341/582 (58%), Gaps = 14/582 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF---E 60
           YR+H+ G+L   ++G  V LSGWV   R  GG+ F+D+RD  G TQ+V + D       E
Sbjct: 3   YRSHNLGELRKENIGQVVTLSGWVDTKRDLGGLTFIDLRDREGKTQIVFDIDYTNKDIIE 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
            A+ +R+E V+ + G V  R+++  N NI TG+IE+  +++E+L+  + LP  + G E  
Sbjct: 63  TAQKLRNEAVIKVVGEVKERASK--NLNIPTGEIEVFVKELEVLNQCDVLPFQITGTEEN 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+IR KYR+LD+RR  + +N+  R R+I ++R  M    F++  TPILT S+PEGARD
Sbjct: 121 LSENIRLKYRYLDIRRPKMIQNLKMRHRMIMAIRNYMDQAGFLDVDTPILTKSTPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR+N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD+
Sbjct: 181 FLVPSRINGGTFYALPQSPQIFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLDV 239

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV QDD++N +E + + VF+  +     +  F R+ Y  A+  YG+DKPDLR  + +
Sbjct: 240 EMSFVTQDDVMNEIEGLAKYVFKHVTGEE-ANYTFERMPYAIAMGEYGSDKPDLRFEVKL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAY 358
            ++++    S F+ FS  +      +    P      +R       ++A+   G  G+AY
Sbjct: 299 KDLSDVVAKSSFKAFSATVENGGIVKAIVAPKAFEKFSRKVLGEYEDYAKQYFGAKGMAY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  ++ E+G ++   P+AK       +AI  R     GD    IA       +     R 
Sbjct: 359 I--KIAENGEIS--SPIAKFFQEDEMKAILERTGAGAGDVILIIADRAKTVHAALGALRL 414

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGNDLLSI 477
            + +ELG+I+ N ++F W++DFP +E++EEE +    H+PFT + +  ME        +I
Sbjct: 415 RLGKELGLIDMNSYKFLWVVDFPMFEYDEEEGRYKAEHHPFTSIKEEDMEKFLAGQTDNI 474

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +   YDLV NG EI  G IR   +E+  + F  + +S E  + +FG    AF+ G PPHG
Sbjct: 475 RTNTYDLVLNGSEIGGGSIRISNTELQAKVFERLSLSPEEAKEKFGFFLDAFKYGAPPHG 534

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
           G+A GIDR +M++L  +++R+V  FP +     L+  +P  V
Sbjct: 535 GLAFGIDRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPGKV 576


>gi|227875436|ref|ZP_03993577.1| aspartate--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|306818747|ref|ZP_07452469.1| aspartate--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307701054|ref|ZP_07638079.1| aspartate--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|227843990|gb|EEJ54158.1| aspartate--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|304648433|gb|EFM45736.1| aspartate--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307614049|gb|EFN93293.1| aspartate--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 595

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 227/610 (37%), Positives = 336/610 (55%), Gaps = 32/610 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH CG+L + +    V L+GWV R R HGG+ F+D+RD  GI Q+V + D     + + 
Sbjct: 3   RTHKCGELTLKNDMETVTLTGWVDRRRDHGGVAFMDLRDASGIVQLVVSED-----VVRE 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----REY 120
           VR+E+VL + G V  R     N  I TG+IE+ A+ +E+L+    LP  V        + 
Sbjct: 58  VRNEYVLKVTGKVRKRPDGNDNPEISTGEIEVVAEDVEVLNPCAPLPFQVSEHAEEAGKV 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YRF+DLRR  LH N+V R +I +  R  M    F+E  TP LT S+PEGARDF
Sbjct: 118 GEDVRLRYRFVDLRRRQLHDNLVLRAKISSVARRVMEKHEFLEIETPTLTRSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R+  GS+YALPQ+PQ +KQLLM  G +RY+Q+A C+RDED R+DR P EF QLD+E
Sbjct: 178 VVPARIKPGSWYALPQSPQLFKQLLMVGGMERYYQLARCYRDEDSRADRQP-EFTQLDLE 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++   E++L+ V+        +     R+ + +A+ +YG+DKPDLR    + 
Sbjct: 237 MSFVDQDDVMAVTEDLLKEVWAVIG--YDLKTPIPRMPFKEAMDKYGSDKPDLRFGYELV 294

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +TE+F  + F++F         Y    +   G    R   D+  EWA+++G  GLAY+ 
Sbjct: 295 ELTEYFSDTPFKIFQAP------YVGAVVMPGGAAQPRRTFDKWQEWAKARGAKGLAYVT 348

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D        GPVAK+++    E +      + GD  FF AG+          AR  I
Sbjct: 349 IAEDG----TTAGPVAKNISDTEREGLAEVTGAKPGDCIFFAAGERTASQELLGAARLEI 404

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWN---EEEKK-------IDFAHNPFTMPQGGMESLK 470
            +  G+I+   + F W++D P ++ +   E E             H+ FT P+       
Sbjct: 405 GKRCGLIDPKAWAFTWVVDAPLFKPSGQAEAEGDVALGHSAWTAVHHAFTSPKPECMDTF 464

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D  S  A+ YD+VCNG E+  G IR H  +V  + F  +G S E  + RFG L  AF+
Sbjct: 465 DTDPGSALAYAYDIVCNGVELGGGSIRVHRRDVQERIFKVMGFSPEEAQARFGFLLDAFK 524

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGG+A G DRI  +L  + ++R+V  FP + +  D L G+P+ ++ EQ +E G+ 
Sbjct: 525 YGAPPHGGLALGWDRIAGMLTASPSIRDVIAFPKAGDGFDPLTGAPAPITDEQRKETGVD 584

Query: 591 IVENPKKILK 600
              + +   +
Sbjct: 585 WKPDSEDAEE 594


>gi|150005727|ref|YP_001300471.1| aspartyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|166225320|sp|A6L585|SYD_BACV8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|149934151|gb|ABR40849.1| aspartyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
          Length = 587

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 228/600 (38%), Positives = 341/600 (56%), Gaps = 18/600 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            +R+H+CG+L +SD G  V L+GWV R R  GG+ F+D+RD YGITQ+V N        E
Sbjct: 1   MFRSHTCGELRLSDAGKSVTLAGWVQRARKMGGMTFVDLRDRYGITQLVFNEAVNAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ I G V  RS +  N NI TG+IE+    + +L+ A   P  +    + 
Sbjct: 61  RANHLGREFVIQITGEVNERSNK--NMNIPTGEIEIIVSVLNVLNSAVTPPFTIEDNSDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR K+R+LDLRR+ + KN+  R ++   +R  + ++ F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKFRYLDLRRNCVRKNLELRHKMTMEVRRYLDSKGFLEVETPMLVGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI++T E + + +F+E      +S  FLR+ + DAI+ YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDIISTFEGMAKHLFKELRGVE-LSEPFLRMTWADAIKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     +                 R   D++ E+ +    G  G+ Y
Sbjct: 297 ELMDIMKGHGFSVFDDAAYIGG-----ICAEGAASYTRKQLDQLTEFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADAR 417
              R++  GNV     V K  +    + ++     + GD    ++G D +K      + R
Sbjct: 352 A--RVEADGNVK--SSVDKFYSQEVLQQMKEAFSAKPGDLILILSGPDAMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + ++LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  ++
Sbjct: 408 LEVGRQLGLRDKNKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H S++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVVNGVEVGGGSIRIHDSQLQAKMFEILGFTPERAQEQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+A G+DR V L  G  ++R+   FP + +  D+++ +P+ +   QL EL L +     K
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDQSQLDELNLVVDIKEDK 587


>gi|308184401|ref|YP_003928534.1| aspartyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308060321|gb|ADO02217.1| aspartyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 577

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 221/591 (37%), Positives = 341/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR  + ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLSAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+     + +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAIG--HNISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILEKTGAKAGDIVFFGAGDKEIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+     ++  DL  I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKN----IECKDLEEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|182437583|ref|YP_001825302.1| aspartyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|238688986|sp|B1VQW8|SYD_STRGG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|178466099|dbj|BAG20619.1| putative aspartyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 599

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 286/594 (48%), Positives = 395/594 (66%), Gaps = 10/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYG+ Q+VA P +   +
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPGND 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E V+ IDG V +R A+ +N  + TG+IE+   ++E+L  A  LP  +  E   
Sbjct: 61  ALAKLTKETVVRIDGKVSARGADNVNPELPTGEIEIEVTEVEVLGEAGPLPFTINTEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +F EF NG  V++ F RI + +++ +YG DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFTEFGNGREVTSPFPRIPFRESMLKYGNDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++ F  S F+ F+        +          G +R F D + E+A   G  GLA++ 
Sbjct: 301 DISDVFADSGFKAFA------GKHVRALPVPDTAGQSRKFFDGLGEYAVEHGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G +A  GP+AK L   + + +  RL +  G + FF AG+  +     +  R   
Sbjct: 354 -RVGEDGTLA--GPIAKFLTETDVKTLTERLSLVPGHAVFFGAGEFDEVSKIMSAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G      F FCWI+DFP YE +EE  KIDF+HNPF+MPQGG+  L+  D L I A+
Sbjct: 411 AKRAGHFEEGVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLADLEEKDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  E+ML+AF   G  +E VE+ F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGIELSSGAIRNHEPELMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++ + 
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDESRLRELNIQLRKP 584


>gi|326778237|ref|ZP_08237502.1| aspartyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326658570|gb|EGE43416.1| aspartyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 595

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 286/594 (48%), Positives = 395/594 (66%), Gaps = 10/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYG+ Q+VA P +   +
Sbjct: 1   MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPGND 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +  E V+ IDG V +R A+ +N  + TG+IE+   ++E+L  A  LP  +  E   
Sbjct: 61  ALAKLTKETVVRIDGKVSARGADNVNPELPTGEIEIEVTEVEVLGEAGPLPFTINTEDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +F EF NG  V++ F RI + +++ +YG DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIEKLMTELFTEFGNGREVTSPFPRIPFRESMLKYGNDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++ F  S F+ F+        +          G +R F D + E+A   G  GLA++ 
Sbjct: 301 DISDVFADSGFKAFA------GKHVRALPVPDTAGQSRKFFDGLGEYAVEHGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G +A  GP+AK L   + + +  RL +  G + FF AG+  +     +  R   
Sbjct: 354 -RVGEDGTLA--GPIAKFLTETDVKTLTERLSLVPGHAVFFGAGEFDEVSKIMSAVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G      F FCWI+DFP YE +EE  KIDF+HNPF+MPQGG+  L+  D L I A+
Sbjct: 411 AKRAGHFEEGVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLADLEEKDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  E+ML+AF   G  +E VE+ F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGIELSSGAIRNHEPELMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL +++ + 
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTELDESRLRELNIQLRKP 584


>gi|282882110|ref|ZP_06290751.1| aspartate--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281298140|gb|EFA90595.1| aspartate--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 589

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 221/594 (37%), Positives = 339/594 (57%), Gaps = 13/594 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           +  RT+ CGDL  +D+ S V L GWV R R  G IIF+D+RD  GI QVV N  S    I
Sbjct: 7   NLKRTNYCGDLRENDIDSEVILMGWVQRARSLGSIIFIDLRDREGICQVVVNETSPEEVI 66

Query: 62  AK--SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
            K   + +E+V+ + G+V  RS  +IN  I TG+IE+ A +I+IL+ ++  P+ V     
Sbjct: 67  NKATKLHNEYVIAVKGIVRMRS--SINDKIPTGKIEVLASEIKILNESQVPPIYVKDNDN 124

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E++R KYR LDLR+ ++ +N+  R++I    R       FIE  TP+LT  +PEGARD
Sbjct: 125 VAENMRLKYRTLDLRKPSMLRNLKLRSKIYKITRDFFYDNGFIEVETPMLTKPTPEGARD 184

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN G FYALPQ+PQ  KQLLM SG DRY QI  CFRDED R++R P EF Q+DM
Sbjct: 185 YLVPSRVNSGKFYALPQSPQLMKQLLMVSGLDRYIQITKCFRDEDLRANRQP-EFTQIDM 243

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E+SFV +DD+++  E  L+ +F+E  + +       R+ Y +A+ R+G DKPDLR  + +
Sbjct: 244 ELSFVTEDDVMSINEKFLQKLFKEMLDIDI-KLPLRRMKYSEAMDRFGVDKPDLRFGMEL 302

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++++    S F+VF + +  +       +       ++    ++ E+ +     GL  +
Sbjct: 303 KDISDIVKDSGFKVFEEAVK-DGSVRGINVKNGAEKYSKKKIKKLEEFVKDFKAKGLVQV 361

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                          + K ++      I      + GD    +AG          + RN 
Sbjct: 362 KV------EDEIDSSIKKFVSEEILNKIVQAFQAEKGDLILIVAGKDQVVYDSLGNLRNK 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA++L +I+ N +E  WI DFP +E++E+EK+    H+PFT P+     +  ++    +A
Sbjct: 416 IARDLDLIDKNSYEMLWITDFPLFEYDEDEKRYVAKHHPFTSPKDEDLDIILSNPEKARA 475

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR +  E+  + F  +G + E  + +FG L  AF+ G PPHGG+
Sbjct: 476 KAYDIVINGDEMGGGSIRINDQEIQKKMFKALGFTDEDAKEKFGFLLEAFKYGAPPHGGL 535

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DR+ ML  GA+N+R+V  FP +Q+   LL  +P+ +S +QL E+ ++++E
Sbjct: 536 AYGLDRLTMLFTGAENIRDVIAFPKTQSATCLLTEAPTELSEKQLEEVHIKVIE 589


>gi|308063594|gb|ADO05481.1| aspartyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 577

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 221/591 (37%), Positives = 340/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+     + +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAIG--HNISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GVKGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+     ++  DL  I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKN----IECKDLEEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|227484951|ref|ZP_03915267.1| aspartate--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227237106|gb|EEI87121.1| aspartate--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 582

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 211/593 (35%), Positives = 331/593 (55%), Gaps = 12/593 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           M   RTH CG L  SD+G  V L GWV + R  G ++F+D+RD  GI+Q+V  + D   +
Sbjct: 1   MEFKRTHMCGSLRSSDLGKEVVLMGWVAKKRNLGSLVFIDLRDKTGISQIVIRDDDKDNY 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A+ +  E+VL + G V  R  E+ N +I TG IE+ A KI IL  A+  P+ +  + +
Sbjct: 61  EKAREISQEYVLEVKGKVFER--ESKNPDIPTGDIEIIADKINILDKAKTPPIYIKDDDD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E++R KYR+LD+R+ ++ +N+  R+ I+ +MR      +F E  TP LT  +PEGARD
Sbjct: 119 VSENLRLKYRYLDMRKPSVQRNLKLRSDIVRTMREYFYENDFTEVETPFLTKPTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+N G FYALPQ+PQ  KQ+LM    DRYFQ+  CFRDED R++R P EF QLD+
Sbjct: 179 YLVPSRINAGKFYALPQSPQLLKQILMIGSLDRYFQVVKCFRDEDLRANRQP-EFTQLDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF  QDD++   E +L+ +F+ +++ + +     R+ Y +A+  YG+DKPDLR    +
Sbjct: 238 EMSFSNQDDVIAMNEGLLKVLFDTYTDYD-LKLPINRMDYSEAMESYGSDKPDLRYGYKI 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V+E FV SEF+VF+                     +R   D++ ++ +  G  GL+YI
Sbjct: 297 KDVSEIFVGSEFKVFADNTGDGRSVRAINFTGLEDKYSRKQLDKLTDFVKDYGLKGLSYI 356

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +      N      + K L       ++ +LD +DGD  F  A             R  
Sbjct: 357 KF------NNEMQSSIKKFLTDDVINGLKEKLDAKDGDLIFLAADKDKTVLEGLGALRVK 410

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA++  +     +   W+++FP +E++EEE +    H+PFTMP      L       ++ 
Sbjct: 411 IAKDNNLYEKE-YALTWVVNFPMFEYSEEEDRYVAQHHPFTMPNEEDIDLLLTQPEKVRT 469

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G +R + S++  + F  + +S E ++ +FG    A Q G PPH G+
Sbjct: 470 QAYDIVINGDEMGGGSVRINNSDLQKKVFEALKLSDEDIKIKFGFFIEALQYGTPPHAGL 529

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR++ML     N++++  FP +Q+    L  +P+ V  + L +L +++ 
Sbjct: 530 AYGLDRLLMLFAKTDNIKDIIAFPKTQSATCPLTEAPTMVDDKALEDLNIKLR 582


>gi|308061948|gb|ADO03836.1| aspartyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 577

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 221/591 (37%), Positives = 340/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+     + +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAIG--HNISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+     ++  DL  I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKN----IECKDLEEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|332296917|ref|YP_004438839.1| aspartyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180020|gb|AEE15708.1| aspartyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 605

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 238/606 (39%), Positives = 344/606 (56%), Gaps = 19/606 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
             RT +CGDL  +D+G  V L+GW+HR R HGGI F+++RD YG+TQVV + DS      
Sbjct: 4   MKRTATCGDLRKADIGKAVTLNGWIHRKRDHGGISFINLRDRYGLTQVVVDSDSPAELAA 63

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  ++ E+ + ++G+V  R    INA++ TG++E+ A++I ILS ++ LP  +    + 
Sbjct: 64  TAADLKMEYCVAVEGIVRGRPDSMINADMPTGEVEVVAKRISILSKSDVLPFMIDELNKD 123

Query: 121 P------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                  E +R K+R+LDLR  ++  ++  R ++  ++R  + A NF E  TP    S+P
Sbjct: 124 GTRVVPNEDLRLKFRYLDLRTASMQHHLALRHKVTIAVRNYLDAHNFYELETPTFIKSTP 183

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EGARD+LVPSR+  G FYALPQ+PQ YKQLLM SGFDRYFQIA C+RDED R DR P EF
Sbjct: 184 EGARDYLVPSRLYPGKFYALPQSPQLYKQLLMVSGFDRYFQIARCYRDEDARGDRQP-EF 242

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            Q+DMEMSFV +DD+L   E +++ VF+E    + ++  F RI YDDAI  YG+DKP+LR
Sbjct: 243 TQIDMEMSFVSRDDVLAMTEGMMQAVFKETMGID-LALPFQRIAYDDAIDWYGSDKPELR 301

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILS------VNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
             + M +         F+ F   L+      V    +   +       +R   + +   A
Sbjct: 302 FGMKMQDGAFLAELGTFQAFKDALAPDEKGCVTGAVKALVVSGAAEAYSRKKIEELESAA 361

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
           +     GL ++         +   G +AK         +  RL  + GD   F+A    K
Sbjct: 362 KIYKARGLGWMKVAGTPDAPL-LEGGIAKFF-DGKAGDVCARLGAKTGDLLLFVADTKKK 419

Query: 409 -FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
             C+     R  + ++LG+ + + F F WI+DFP +EWNE+E K D AH+ FTMPQ    
Sbjct: 420 TACTALGAVRTRLGKDLGLCDPDAFAFAWIVDFPMFEWNEDECKWDTAHHMFTMPQEKYH 479

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           +   +D  S+K   YDLV NG+E+ASG IR H  ++  + F  VG  +   + +FG L  
Sbjct: 480 ATLESDPGSVKGDLYDLVLNGYELASGSIRIHDPDLQKRIFKIVGFDEAEGQKKFGFLTE 539

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPHGGIA G+DR+VML+    +++EV  FP +      +   PS V  +QL EL
Sbjct: 540 AFKYGAPPHGGIAPGLDRLVMLMCKETSIKEVIAFPKNTFAQSPMDDCPSEVDQKQLDEL 599

Query: 588 GLRIVE 593
            L I E
Sbjct: 600 HLIIKE 605


>gi|254383384|ref|ZP_04998736.1| aspartyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194342281|gb|EDX23247.1| aspartyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 608

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 297/612 (48%), Positives = 402/612 (65%), Gaps = 11/612 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+CG+L  SDVG+ VRLSGW+H  R  GGI+F+D+RDHYGITQ+VA P +A  E
Sbjct: 1   MHRYRSHTCGELRASDVGADVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTAANE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              SV  E V+ IDG V+SR A+ +N  + +G++E+   ++E+L  +  LP  +  +   
Sbjct: 61  ALSSVTKETVVRIDGKVVSRGADNVNPELPSGEVEIEVSEVEVLGASAPLPFTINTDDGV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YRFLDLRR+ +H+NI+ R+ +I S+R +M+A  F E +TPILTA+SPEGARDF
Sbjct: 121 NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD+E
Sbjct: 181 VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+D+   +E ++  +F EF  G  V++ F RI + +++ +YG DKPDLR  + + 
Sbjct: 241 MSFVEQEDVFQPIERLMTELFTEFGAGREVTSPFPRIPFRESMLKYGNDKPDLRAKLELV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F  SEF+ F+            A+P       R F D + E+A S G  GLA++ 
Sbjct: 301 DITDVFEGSEFKAFA-----GKHVRALAVPDT-AAQPRKFFDGLGEYAISLGAKGLAWV- 353

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R+ E G +   GP+AK L   N + +  RL +  G + FF AG+  +     +  R   
Sbjct: 354 -RVGEDGGLT--GPIAKFLTEENVKVLTERLGLAAGHAVFFGAGEFDEVSKIMSGVRVEA 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G    N F FCWI+DFP YE +EE  KIDF+HNPF+MPQGGM+ L+  D L I A+
Sbjct: 411 AKRAGQFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMKDLEEKDPLDILAW 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG IRNH  EVML+AF   G   E VE  F G+ RAF+ G PPHGGIA
Sbjct: 471 QYDIVCNGIELSSGAIRNHEPEVMLKAFEIAGYEAETVEREFAGMLRAFRLGAPPHGGIA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DRIVMLL    N+RE   FP++ N  DL+MG+P+ +   +LREL + +   P +   
Sbjct: 531 PGVDRIVMLLADEPNIRETIAFPLNGNAQDLMMGAPTVLEETRLRELNIALR-KPVETKA 589

Query: 601 ISVTTILRNVYG 612
                +   V+ 
Sbjct: 590 ADAKPVSEAVHP 601


>gi|327183446|gb|AEA31893.1| aspartyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 617

 Score =  586 bits (1510), Expect = e-165,   Method: Composition-based stats.
 Identities = 221/602 (36%), Positives = 344/602 (57%), Gaps = 11/602 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT  CG++    +G  V L GWV RVR  G ++F+D+RD  G+ Q+V N DS     +IA
Sbjct: 7   RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKELMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E+VL + G V+ RS   +N ++ TGQ+E+ A +I IL+ A+  P  +    +  E
Sbjct: 67  DSLGNEYVLQVKGKVVKRSE--VNPDMKTGQVEVDATEIIILNKAKNPPFEIKNGVDISE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +++ I    E +L+ + ++    + +     RI + DA+ +YG+DKPD R  +++H++
Sbjct: 244 FADEETIQGYTEGLLKKIMKDVKGID-LKTPIKRITWTDAMNKYGSDKPDTRYGMLIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +  F  S+F+VFS  ++     +  A+       +R   D+  ++ +     GLA++ + 
Sbjct: 303 SSIFKDSDFKVFSGAIADGGFVKGIAVKNGAKEYSRKKLDKKADFIKRFHAKGLAWVKYE 362

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            DE       GPVA+ L   N EA++   D++ G+   F+A      C      R   A+
Sbjct: 363 DDE-----FSGPVARFLTDDNKEALKKEFDLEGGELVVFVADKWKVICDSLNHLRREFAK 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E GII    ++F W++D+P +E++E   +   AH+PFTMP      L   +     A  Y
Sbjct: 418 ETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHKAHARSY 477

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H   +    F  +G +K+    +FG L  A   G PPH G+A G
Sbjct: 478 DIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGLAIG 537

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           +DR  M+L    N+R+V  FP + +  + +M +P+ V+ +QL +LG+ + +  +  +K +
Sbjct: 538 LDRFAMMLANKDNIRDVLAFPKNASASEPMMHAPAPVADQQLADLGIEVEDKYQDSVKAT 597

Query: 603 VT 604
             
Sbjct: 598 EE 599


>gi|255536117|ref|YP_003096488.1| aspartyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255342313|gb|ACU08426.1| Aspartyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 584

 Score =  586 bits (1510), Expect = e-165,   Method: Composition-based stats.
 Identities = 212/598 (35%), Positives = 338/598 (56%), Gaps = 19/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
            +RTH+ G+L ++++   V LSGWV  +R  G +I++D+RD YGITQ+V + D +  E+ 
Sbjct: 1   MFRTHTNGELSLTNINENVTLSGWVQTIRDKGFMIWIDLRDRYGITQLVFDQDRSSVELL 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             AK +  E+V+ ++G V+ R+++  N  I TG IE+  +K+ +L+ ++  P  +  E +
Sbjct: 61  ENAKKLGREFVIQVEGKVIERTSK--NPKIPTGGIEILVEKLTVLNESQLPPFTIEDETD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR+ +   ++ R ++   +R  +  +NFIE  TP+L  S+PEGARD
Sbjct: 119 GGEELRMKYRYLDIRRNPVKDKLIFRHKMAQKVRNYLSDQNFIEVETPVLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ +KQLLM  G DRYFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNPGQFYALPQSPQTFKQLLMIGGMDRYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+D+L   E +   + ++ ++       F R+ + DA+++YG DKPD+R  +  
Sbjct: 238 EMAFVEQEDVLEIFEGMTATLLKDITSKEF--GKFPRMTFADAMQKYGNDKPDIRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             V E     +F++F +   V                 R   D + +W +    G  G+ 
Sbjct: 296 VEVNELVQGKDFKIFDEAELVVGINVEGC-----ADYTRKQIDELIDWVKRPQIGASGMI 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ ++ D          V K  +  N + I  +   ++GD    ++G+  K  +  +  R
Sbjct: 351 WVKYQNDGV----VTSSVNKFYSEENLKKITEKFGAKEGDLILLMSGNENKVRTQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +   LG+ N   F   W++DFP  EW+EE  +    H+PFT P+     L  +D    
Sbjct: 407 MELGNRLGLRNSKEFAPLWVIDFPLLEWDEETGRYHAMHHPFTSPKPEDVHLLESDPGKA 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG EI  G +R    ++  + F  +G +KE  E +FG L  AF+ G PPH 
Sbjct: 467 RANAYDLVLNGNEIGGGSVRIFDKDLQSKMFDLLGFTKEDAEAQFGFLMNAFKYGAPPHA 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G DR+V +L G + +R+   FP + +  D+++ +PS ++ EQL EL L++    
Sbjct: 527 GLAFGFDRLVAILDGNEVIRDYIAFPKNNSGRDVMIDAPSYIANEQLDELYLKVETKE 584


>gi|325297825|ref|YP_004257742.1| aspartyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324317378|gb|ADY35269.1| aspartyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 585

 Score =  586 bits (1510), Expect = e-165,   Method: Composition-based stats.
 Identities = 224/598 (37%), Positives = 338/598 (56%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            +R+H+CG+L ++D G  V L+GWV R R  GG+ F+D+RD YGITQ+V N +      E
Sbjct: 1   MFRSHTCGELRLADAGKNVTLAGWVQRSRKMGGMTFVDLRDRYGITQLVFNTEVNAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+   G V  RS++  NANI TG IE+   ++ IL+ A+  P  +    + 
Sbjct: 61  RANHLGREYVIQAKGTVSERSSK--NANIPTGDIEIIVSELNILNAAQTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + KN+  R R+   +R  + ++ F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRTAVRKNLELRHRMTMEVRRYLDSKGFLEVETPMLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI+   E + + +F+E      ++  F R+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDIIQMFEGMAKHLFKELRGVE-LAGPFQRMPWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAY 358
            + +      F VF     +                 R   D++ E+ +    G  G+ Y
Sbjct: 297 ELMDILKGYGFSVFDNAAYIGG-----ICAEGAAHYTRKQLDQLTEFVKRPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  GNV     V K  +    + ++     + GD    ++GD + K      + R
Sbjct: 352 A--RVEADGNVK--SSVDKFYSQEVLQQVKEAFGAKPGDLILILSGDDVMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + + F   W++DFP +EW+EEE ++   H+PFT P+     L   D  S+
Sbjct: 408 LEMGNQLGLRDKDKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDPASV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H S +  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVVNGVEVGGGSIRIHDSALQEKMFEILGFTPEKAQEQFGFLMNAFKFGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +P  +  +QL EL L++    
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPGFLDQKQLDELQLKVDIKE 585


>gi|116333383|ref|YP_794910.1| aspartyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|116098730|gb|ABJ63879.1| aspartyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 600

 Score =  586 bits (1510), Expect = e-165,   Method: Composition-based stats.
 Identities = 208/590 (35%), Positives = 331/590 (56%), Gaps = 14/590 (2%)

Query: 1   MHR--YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--S 56
           M +   RT   G +  + +   V L GWV + R  G +IF+D+RD  GI Q+V + +   
Sbjct: 1   MEKNLKRTTYAGLVDEAYLDQTVVLKGWVQKRRDLGSLIFIDLRDREGIVQLVFSEEYSQ 60

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           A   +A  +R+E+V+ + G V++R+ + +NA++ TG++E+    I +L+ ++ LP  +  
Sbjct: 61  AALAVADQLRNEYVIEVQGQVVARADKEVNADMRTGKVEVRVTGINLLNKSKALPFDIKD 120

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           +    + +R +YR+LDLRR  + + I  R RII S+        FI+  TP LT S+PEG
Sbjct: 121 DLNASDELRLQYRYLDLRRPEMQRAIRLRNRIIQSVHSYFDNNGFIDIETPNLTKSTPEG 180

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR+  G FYALPQ+PQ +KQLLM SGFDRY+QIA CFRDED R DR P EF Q
Sbjct: 181 ARDYLVPSRIYPGHFYALPQSPQLFKQLLMGSGFDRYYQIARCFRDEDLRGDRQP-EFTQ 239

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +D+E SF+  ++I +  E ++  V ++  N + V   F R+ +DD++ RYGTD+PD+R  
Sbjct: 240 IDLETSFLTAEEIQDLTEGLIAKVMKDTLNVD-VKLPFQRMDWDDSMARYGTDQPDVRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           + + +++E    ++F+VFS  ++     +  A+P      +R   D+  ++    G  GL
Sbjct: 299 MELKDLSEMMADTDFKVFSGAVANGGQVKAIAVPGGADLYSRKDLDKYGKYIERFGAKGL 358

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           A++    D        GP+AK     +  + I    D + GD   F A            
Sbjct: 359 AWLKVTDD-----GFSGPIAKFFKEGDWFDQITAATDAKSGDLLLFAADSKRVVAQTLGY 413

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--ND 473
            R  IA+E  +I+ N + F WI+++P ++++ + ++   AH+PFTMP  G         D
Sbjct: 414 LRVAIAKEQDMIDENKWAFLWIVNWPLFDYDVDLERWVPAHHPFTMPAEGDAHYLNDGED 473

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                A  YD++ NG E+  G IR H  E+ ++    +G + E  E++FG L +A   G 
Sbjct: 474 PHKAYAQSYDIILNGLELGGGSIRIHTRELQMKMLKALGFTPERAESQFGFLLKALDYGF 533

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
           PPHGG+A G+DR   LL    N+R+V  FP +    + +  +P+TV+ +Q
Sbjct: 534 PPHGGLAIGLDRFARLLAKRDNIRDVIAFPKNSKATEPMTEAPTTVADKQ 583


>gi|225869429|ref|YP_002745377.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|259511870|sp|C0MGD3|SYD_STRS7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225702705|emb|CAX00825.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 582

 Score =  586 bits (1510), Expect = e-165,   Method: Composition-based stats.
 Identities = 219/592 (36%), Positives = 338/592 (57%), Gaps = 17/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++ 
Sbjct: 1   MKRSMYAGHVRKEHIGRTIVLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEDVSGDVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +RSE+V+ ++G V +R     N  + TG +EL    + IL+ A+  P  +    E
Sbjct: 61  ATAERLRSEYVIEVEGSVEARQ--QANDKLATGAVELKVSGLTILNTAKTTPFEIKDGVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R +YR+LDLRR  + ++   R +  + +R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDDTRLRYRYLDLRRPEMLESFKLRAKTTHVIRNYLDNLGFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR++QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRISQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V ++      V   F R+ YDDA+  YG+DKPD R  + +
Sbjct: 238 ETSFLSEQEIQDIVEGMIAKVMKDTKGIE-VKLPFPRMAYDDAMNHYGSDKPDTRFDMFL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T+     +F+VFS+  +V        +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTDLVKEIDFKVFSEAQAVK----AIVVKGHADRYSRKDIDKLTEFAKQFGAKGLAWL 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                        GP+AK L  V ++ +   L ++  D   F+A       +     R  
Sbjct: 353 KVADGA-----FTGPIAKFLTGVESK-LTESLQLEHNDLVLFVADTLEVANNTLGALRTR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +I+ + F F W++D+P +EW+EEE++   AH+PFT+P          DL  ++A
Sbjct: 407 IAKELDMIDMSQFNFLWVVDWPMFEWSEEEERYMSAHHPFTLPTAESAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G + E    +FG L  A + G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDMQERMFRALGFTAEEANEQFGFLLEAMEYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL G  N+REV  FP +    D +  +PS VS +QL EL L+I
Sbjct: 527 AIGLDRLVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEKQLEELQLQI 578


>gi|195978983|ref|YP_002124227.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|238689789|sp|B4U0K5|SYD_STREM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|195975688|gb|ACG63214.1| aspartyl-tRNA synthetase AspS [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 582

 Score =  586 bits (1510), Expect = e-165,   Method: Composition-based stats.
 Identities = 220/592 (37%), Positives = 342/592 (57%), Gaps = 17/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  G+ Q+V NP+    ++ 
Sbjct: 1   MKRSMYAGHVREEHIGRTIVLKGWVSRRRDLGGLIFIDLRDREGVMQLVINPEDVSGDVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +RSE+V+ ++G V +R     N  + TG +EL    + IL+ A+  P  +    E
Sbjct: 61  ATAERLRSEYVIEVEGSVEARQ--QANDKLATGAVELKVSGLTILNTAKTTPFEIKDGVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + +R +YR+LDLRR  + ++   R +  + +R  +    FI+  TP+LT S+PEGARD
Sbjct: 119 VSDDMRLRYRYLDLRRPEMLESFKLRAKTTHVIRNYLDNLGFIDVETPMLTKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR++QG FYALPQ+PQ  KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRISQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I + +E ++  V ++      V   F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEQEIQDIVEGMIAKVMKDTKGIE-VKLPFPRMAYDDAMNHYGSDKPDTRFDMLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++T+     +F+VFS+  +V        +       +R   D++ E+A+  G  GLA++
Sbjct: 297 QDLTDLVKEVDFKVFSEAQAVK----AIVVKGHADDYSRKDIDKLTEFAKQFGAKGLAWL 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                        GP+AK L  V ++ +   L ++  D   F+A       +     R  
Sbjct: 353 KVVDGA-----FTGPIAKFLTGVESK-LTESLQLEHNDLVLFVADTLEVANNTLGTLRTR 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+EL +I+ + F F W++D+P +EW+EEE++   AH+PFT+P          DL  ++A
Sbjct: 407 IAKELDMIDMSQFHFLWVVDWPMFEWSEEEERYMSAHHPFTLPTQESAHELEGDLAKVRA 466

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG+E+  G +R +  ++  + F  +G +KE   ++FG L  A + G PPHGG+
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDMQERMFKALGFTKEEASDQFGFLLEAMEYGFPPHGGL 526

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+VMLL G  N+REV  FP +    D +  +PS VS +QL EL L+I
Sbjct: 527 AIGLDRLVMLLAGKDNIREVIAFPKNNKASDPMTQAPSLVSEKQLEELQLQI 578


>gi|153955740|ref|YP_001396505.1| aspartyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219856109|ref|YP_002473231.1| hypothetical protein CKR_2766 [Clostridium kluyveri NBRC 12016]
 gi|189082091|sp|A5N1Y8|SYD_CLOK5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781727|sp|B9E5P2|SYD_CLOK1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146348598|gb|EDK35134.1| AspS [Clostridium kluyveri DSM 555]
 gi|219569833|dbj|BAH07817.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 590

 Score =  586 bits (1510), Expect = e-165,   Method: Composition-based stats.
 Identities = 213/592 (35%), Positives = 340/592 (57%), Gaps = 13/592 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG L  +++G  + + GWV R R  GG++F+D+RD  GI Q+V     +   FE 
Sbjct: 9   KRTCMCGGLTEANIGDKITVMGWVQRKRNLGGLVFVDLRDRTGILQIVFGEAINKEAFEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           + SV+SE+ +   G ++ R  E+ N  I TG +EL  + I+I S +E  P+ +    +  
Sbjct: 69  SDSVKSEYCIAAVGTIVKR--ESPNMEIPTGMVELKGEYIKIFSESETPPIYIKENLDAA 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+IR KYR+LDLRR  + +  + R +    +R  +  + F+E  TPIL  S+PEGARD+L
Sbjct: 127 ENIRLKYRYLDLRRPDMQRIFMLRHKTAKVIRDFLDEQGFLEIETPILGKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR  +G +YALPQ+PQ +KQLLM SG+DRYFQIA CFRDED R++R P EF Q+DME+
Sbjct: 187 VPSRNYKGKYYALPQSPQLFKQLLMVSGYDRYFQIAKCFRDEDLRANRQP-EFTQVDMEI 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+++++  E +++ VF++  + + V     R+ Y  A+ +YG+DKPDLR  + +++
Sbjct: 246 SFVDQEEVMDLNERLIQRVFKQILDVD-VKLPIERMTYKTAMDKYGSDKPDLRFGMEIND 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E     +F+VF   L          +        R   D++ E+ ++ G  GL ++ +
Sbjct: 305 ISEVVKGVDFKVFQNALENGGSVRAIKV-TGSAALGRKQLDKLVEFVKTYGASGLIWMAY 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +            ++K L   +T+ I  +++  +GD    +A             R H+A
Sbjct: 364 K-----KEGIKCSISKFLTEEDTQNILNKMEAAEGDLILIVADKNKVVFESLGALRIHMA 418

Query: 422 QELGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           ++ GI+   N F+F WI +FP   +NEEE +    H+PF MP         ++   ++A 
Sbjct: 419 KQTGILEGNNDFKFVWITEFPLLSYNEEENRYQAEHHPFVMPMDEDIQYLESNPEKVRAK 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  +GISK+   N+FG    A + G PPHGG+A
Sbjct: 479 AYDIVLNGEELGGGSIRIHDTKLQEKMFGAIGISKDTAWNKFGYFLEALKFGPPPHGGLA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G DR++M L G  N+++V  FP +QN    L  +P++V   QL++LG+ + 
Sbjct: 539 YGFDRMIMFLAGTDNIKDVIAFPKNQNAFCPLTEAPNSVDKSQLKDLGIEVK 590


>gi|331701368|ref|YP_004398327.1| aspartyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128711|gb|AEB73264.1| aspartyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 595

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 220/598 (36%), Positives = 333/598 (55%), Gaps = 13/598 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             RT   G +    +G  V L GWV + R  GG+IF+++RD  GI Q+V + +       
Sbjct: 1   MKRTTYAGLVDEQLIGQEVVLKGWVQKRRDLGGLIFIELRDREGIVQLVFSEEFGQDALA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  +RSE+V+   G V++R  + IN  + TG+IE+     +IL+ A+  P  +      
Sbjct: 61  VADKLRSEYVVEAKGKVVARDPKEINPKMKTGKIEVDITDAKILATAKTPPFYIQDGINV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E ++ KYR+LDLRR  + KNI+ R RII S+       +FI+  TP LT S+PEGARD+
Sbjct: 121 SEDLKLKYRYLDLRRPEMQKNILLRNRIIQSIHSYFDQNDFIDIETPTLTKSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  GSFYALPQ+PQQ+KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+DME
Sbjct: 181 LVPSRVYPGSFYALPQSPQQFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQIDME 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF +Q++I +  E  +  V ++    + V   F R+ +D+++ RYGTD+PD+R  + + 
Sbjct: 240 MSFADQEEIEDVTEGFIAKVMKDAMGID-VQLPFKRMDWDESMARYGTDQPDVRFGMELK 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++     +F+VFS  +      +  A+P      +R   D+  ++    G  GLA++ 
Sbjct: 299 DLSDIMKDVDFKVFSGAVKDGGQVKAIAVPGGAEKYSRKDLDKFADYVVRFGAKGLAWLK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              D        GP+AK     +  E I  + + + GD   F A +     +  A  R  
Sbjct: 359 VTDD-----GFNGPIAKFFKDADLREKILAKAEAKPGDLLLFAADNSRVVANTLAYLRVE 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK---GNDLLS 476
           IA+E  +I+ + F F WI+++P ++W+ + K+   AH+PFTMP           G D   
Sbjct: 414 IAKEQNMIDESKFAFLWIVNWPLFDWDVDLKRYVAAHHPFTMPNEDDVHYLMNEGEDPHK 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD++ NG E+  G IR H   +  + F  +G +KE  E +FG    A   G PPH
Sbjct: 474 AYAQSYDIILNGLELGGGSIRIHTRALQEKMFEALGFTKESAEAQFGYFLNALDYGFPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           GG+A G+DR V LL    N+R+V  FP +    + L  +P  V+ +QL +LGL + + 
Sbjct: 534 GGLAIGLDRFVRLLADRDNIRDVIAFPKNSKAVEPLTSAPQPVATKQLEDLGLFVAKP 591


>gi|269795068|ref|YP_003314523.1| aspartyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269097253|gb|ACZ21689.1| aspartyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 590

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 235/602 (39%), Positives = 334/602 (55%), Gaps = 28/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+ G L    +G  V L+GWV R R HGG+ F+D+RD  G+ QVV   +S    +A  
Sbjct: 3   RTHTAGSLRAEHIGQTVTLTGWVDRRRDHGGVAFIDLRDASGVAQVVIRDES----VAHP 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----FGEREY 120
           +RSE+VL + G V  R     N N+ TGQ+EL A  + +L+ +  LP  V     G    
Sbjct: 59  LRSEFVLQVTGEVSQRPDGNENTNLATGQVELVAADVVVLNESAPLPFQVSTALDGTETI 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R K+R+LDLRR    K +  R +   + R  + A+ F+E  TP LT S+PEGARDF
Sbjct: 119 GEEARLKHRYLDLRRPAPAKALRLRAKANAAARRVLDAQEFVEIETPTLTRSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 179 LVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD++   E +L  +++      T+     R+ + DA+ RYG+DKPDLR  + + 
Sbjct: 238 MSFVEQDDVIALGEQLLVALWDLIG--VTIPTPIPRMTFKDAMERYGSDKPDLRFGLELT 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +T +F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+ 
Sbjct: 296 ELTGYFSETPFRVFQAP------YVGAVVFPGGASTPRRGFDAWQEWAKQRGAKGLAYVT 349

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +   E G +   GPVAK+L+    E +      + GD+ FF AG P    +    AR  I
Sbjct: 350 F--TEDGELG--GPVAKNLSDSEREGLAAATGAKPGDAVFFAAGKPTDARALLGAARLEI 405

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE-------EKKIDFAHNPFTMPQGGMESLKGND 473
            ++ G+I+ + + F W++D P ++   E       E      H+ FT P          +
Sbjct: 406 GKKAGLIDEDQWAFVWVVDAPLFKPTGEDDDVAVGEGAWTAVHHAFTSPTPEWIDTFEEN 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                A+ YD+VCNG EI  G IR H  +V  + F+ +GI +E  + +FG L  AF  G 
Sbjct: 466 PGEALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFAIMGIGEEEAQEKFGFLLDAFAFGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G DRI+ LL G+ ++R+V  FP S    D L  +P+ ++ +Q +E G+    
Sbjct: 526 PPHGGIAFGWDRILTLLTGSDSIRDVIAFPKSGGGFDPLTQAPAPITAQQRKEAGVDSTP 585

Query: 594 NP 595
            P
Sbjct: 586 KP 587


>gi|224437675|ref|ZP_03658622.1| aspartyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144122|ref|ZP_07806315.1| aspartyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129153|gb|EFR46770.1| aspartyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 579

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 231/590 (39%), Positives = 335/590 (56%), Gaps = 17/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH C +L    +G  V++ GW +  R HGG+IF+D+RD  GI Q+V +P+S    IA S
Sbjct: 3   RTHLCAELNEKHIGKEVQVCGWCNTYRDHGGVIFIDLRDKSGIIQLVCDPNSQAHSIASS 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR E+VL   G + +R     N  + TG IE+  + + I + +   P    G+    E +
Sbjct: 63  VRDEYVLIAKGKIRARGEGLENPKLKTGMIEVVLESLVIENKS-PTPPIAIGDESVNEEL 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    +     R+    + R  +    F+E  TPILT ++PEGARD+LVPS
Sbjct: 122 RLKYRYLDLRSPKAYNIFKIRSDAAIAARNSLQKMGFLEVETPILTKATPEGARDYLVPS 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV+ G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMSF 
Sbjct: 182 RVHSGEFYALPQSPQLFKQLLMMSGFDKYFQIAKCFRDEDLRADRQP-EFTQIDIEMSFC 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQ+DI+   E +L+ +F   + G ++   F+R+ Y  A+  YG+DKPDLR  + +  V +
Sbjct: 241 EQNDIITMAETLLQDIF--VACGESIQTPFMRMPYTQAMESYGSDKPDLRFEMPLVEVGD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +F  I   +      A+  KGG     R       E+ R  G  GLAYI  +
Sbjct: 299 LFLDSNNEIFKNIAKDSKNNRFKALCVKGGDSFFTRKSLGEAEEFVRKFGAKGLAYIQVK 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E       GP+ K ++      +  R++ +  D  FF AG       +    R  IA 
Sbjct: 359 ENE-----LKGPLVKFISESAMSELISRVEAEPNDIIFFGAGAKKVVWDYMGRLRLKIAM 413

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ++ +I+ N  +F W++DFP +E  +E+ K+   H+PFTMP+     L  +D+  I++  Y
Sbjct: 414 DMNLIDENMRKFLWVVDFPMFE--KEDGKVKALHHPFTMPK----DLDKDDVEEIESIAY 467

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H   +  + F  +GIS    +++FG L  A   G PPHGGIA G
Sbjct: 468 DVVLNGIELGGGSIRIHKDSIQKRVFELLGISNNEAQDKFGFLLEALSFGAPPHGGIAIG 527

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            DR++MLL   +++R+V  FP +Q     L  +PS VS EQLR+L +R+ 
Sbjct: 528 FDRLIMLLAKTQSIRDVIAFPKTQKATCPLTLAPSAVSDEQLRDLHIRLK 577


>gi|300361854|ref|ZP_07058031.1| aspartate--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354473|gb|EFJ70344.1| aspartate--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 617

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 218/602 (36%), Positives = 347/602 (57%), Gaps = 12/602 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           M + RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N DS    
Sbjct: 4   MEK-RTDYAGNITSKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGKEL 62

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            +IA S+ +E V+ + G V+ RS  ++N ++ TG++E+ A +I+IL+ ++  P  +  + 
Sbjct: 63  MDIADSLNNEDVIEVKGKVVKRS--SVNPDMKTGEVEVDATEIDILNKSKVPPFEIKDDI 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR TL K I+ R++I+ +         FI+  TPIL  SSPEGAR
Sbjct: 121 NAAEQTRLKYRYLDLRRPTLQKAIMLRSKILKATHEYFDEHGFIDIETPILGKSSPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+D
Sbjct: 181 DYLVPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQID 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME SF ++  + +  E +L+ + ++    + +     RI +++A+ +YG+DKPD R  + 
Sbjct: 240 METSFTDEKQVQDYTEGLLKKIMKDVMGID-LKTPIKRITWNEAMNKYGSDKPDTRYEMF 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +H+++  F  S+F+VFS  ++     +  A+       +R   +   ++ +     GLA+
Sbjct: 299 IHDLSPIFKDSDFKVFSGAIADGGYVKGIAVKNGAKQYSRKKIEEKQDYIKRYHAKGLAW 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           + +   E G  +  GPV++ L   N EA++   D++ G+   F+A             R 
Sbjct: 359 VKY---EDGEFS--GPVSRFLTDENKEALKKEFDLEGGELVVFVADKWKVVTDSLDHLRR 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
             A+E GII  N ++F W++D+P +E++E   +   AH+PFTMP      L   D     
Sbjct: 414 EFAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAH 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G
Sbjct: 474 ARSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLLDALDMGFPPHAG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +A G+DR  M+L    N+R+V+ FP + +  + +M +P+ V+ +QL ++G+++ +  +  
Sbjct: 534 LAIGLDRFAMMLAQKDNIRDVTAFPKNASASEPMMHAPAPVADQQLDDIGIKVEDKYEDS 593

Query: 599 LK 600
           +K
Sbjct: 594 VK 595


>gi|284039033|ref|YP_003388963.1| aspartyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283818326|gb|ADB40164.1| aspartyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 589

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 229/596 (38%), Positives = 334/596 (56%), Gaps = 15/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           RTH+CG+L ++D  +   L GWV  +R  GG++++D+RD YGITQ++        E+   
Sbjct: 3   RTHTCGELRLADHNTTATLCGWVQTIRDKGGVLWIDLRDRYGITQLLLEDGQTAPELFTT 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+  E+V+   G V+ R ++  N NI TG IEL    +E+L+ A+  P  +  E +  
Sbjct: 63  ARSLGREFVVKATGTVIERKSK--NPNIPTGDIELKVTSLEVLNPAKLPPFLIEDETDGG 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRR+ + K++  R R+    R  M  ++FIE  TP+L  S+PEGARDF+
Sbjct: 121 DDLRMKYRYLDLRRNPVRKSLELRHRMAQQTRVYMDGQDFIEVETPVLIKSTPEGARDFV 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D EM
Sbjct: 181 VPSRMNPGEFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDCEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DILN  E ++R +F+     +  S    R+ Y DA++ YG+DKPD R  +    
Sbjct: 240 SFVEQEDILNMFEGLVRHLFKTVKGIDMASV--PRMTYADAMKFYGSDKPDTRFGMEFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWAR--SQGQPGLAY 358
           +   F   +          +    V  I A G     R   D + +W +    G  GL  
Sbjct: 298 LKGTFDTVDMTSGKGFGVFDSAELVVGINAPGCAHYTRKQLDELTDWIKRPQIGAKGL-- 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I+ R +E G +     V K  +    +A       + GD    ++GD  K     ++ R 
Sbjct: 356 IYVRYNEDGTLK--SSVDKFYSETELKAWAAHFGAKPGDLMLIVSGDCAKARKQLSELRL 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +   LG+ + N F   W++DFP  E+ EEE +    H+PFT P+     L   DL +++
Sbjct: 414 EMGSRLGLRDPNVFSTLWVLDFPLLEFGEEENRWFAMHHPFTSPKPEDIPLLDTDLGAVR 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG E+  G IR    ++  + FS +G S E  + +FG L  AF+ G PPHGG
Sbjct: 474 ANAYDLVINGTEVGGGSIRIFNRDLQARMFSILGFSDEEAKAQFGFLMDAFEFGAPPHGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA G DR+  L  GA ++R+   FP + +  D+++ SPS +S  QL EL +  +  
Sbjct: 534 IAFGFDRLCSLFGGADSIRDFIAFPKNNSGRDVMIDSPSAISQAQLNELKIATIAK 589


>gi|256832591|ref|YP_003161318.1| aspartyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686122|gb|ACV09015.1| aspartyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 592

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 230/601 (38%), Positives = 332/601 (55%), Gaps = 28/601 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  +  G+ V L+GWV R R HGG+ F+D+RD  G+ QVV   +    E+A  
Sbjct: 3   RTHHAGTLTTAHKGNTVTLTGWVDRRRDHGGVAFIDLRDASGVAQVVIRDE----EVAHP 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----FGEREY 120
           +R+E+VL + G V  R     N N+ TG+IE+ A ++ +L+ +  LP  V     G    
Sbjct: 59  LRAEYVLQVTGTVEQRPQGNNNPNLPTGEIEVIASQVVVLNESTALPFQVSTALEGTETI 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R ++R+LDLRR    + +  R+++  + R  +   +F+E  TP LT S+PEGARDF
Sbjct: 119 GEEARLRHRYLDLRRPRPAQLLKLRSQVSQAARRVLDTHDFVEIETPTLTRSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 179 LVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD++   E +L  ++        ++    RI Y +A+R+YG+DKPDLR  + + 
Sbjct: 238 MSFVEQDDVIALAEELLANIWALIG--VDLTTPIPRITYHEAMRKYGSDKPDLRFDLEIS 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +T++F ++ FRVF         Y    +   G    R   D   EWAR +G  GLAY+ 
Sbjct: 296 ELTDYFANTTFRVFQA------EYVGAIVMPGGASQPRRQFDAWQEWARQRGAKGLAYVT 349

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               + G +   GPVAK+L     + +        GD  FF AG   +  S    ARN I
Sbjct: 350 IA--DDGTLG--GPVAKNLTDTERDGLAAATGASPGDCIFFAAGRTDESRSLLGAARNEI 405

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHNPFTMPQGGMESLKGND 473
            +  G+I+ + + F W++D P ++   ++             H+ FT P          D
Sbjct: 406 GERTGLIDDDAWAFVWVVDAPLFKPAGQDDDVDLGSSQWTAVHHAFTSPTPEWIDSFDTD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                A+ YD+VCNG EI  G IR H  +V  + F  +GI +E  + +FG L  AFQ G 
Sbjct: 466 PGHALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFQVMGIGEEEAQEKFGFLLDAFQFGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G DRIV LL  A ++R+V  FP S    D L  +P+ ++ +Q +E G+    
Sbjct: 526 PPHGGIAFGWDRIVALLGRADSIRDVIAFPKSGGGFDPLTAAPAPITEQQRKEAGVDAKP 585

Query: 594 N 594
            
Sbjct: 586 E 586


>gi|295426089|ref|ZP_06818759.1| aspartate--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295064258|gb|EFG55196.1| aspartate--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 618

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 217/599 (36%), Positives = 341/599 (56%), Gaps = 11/599 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EI 61
            RT  CG++     G  V L GWV RVR  G ++F+D+RD  GI Q+V N DS     +I
Sbjct: 6   KRTDYCGNITTKYEGQEVTLYGWVQRVRNLGNLVFIDLRDREGIVQIVVNKDSGKELMDI 65

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+ +E+ + + G V+ RS   +N ++ TG++E+ A +I+IL+ ++  P  +  +    
Sbjct: 66  ADSLGNEYCIEVKGKVVKRSD--VNPDMKTGEVEVYATEIDILNKSKVPPFEIKDDINAA 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR TL + I+ R +I+ ++        FI+  TPIL  SSPEGARD+L
Sbjct: 124 EQTRLKYRYLDLRRPTLQRAIILRAKILKAVHEFFDENGFIDIETPILGKSSPEGARDYL 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME 
Sbjct: 184 VPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMET 242

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+++  + +  E +L+ V ++    + +     RI + +++ +YG DKPD R  + +H+
Sbjct: 243 SFLDEKGVEDYTEGLLKKVMKDVMGID-LKTPIKRITWTESMNKYGCDKPDTRYEMFIHD 301

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++  F  S+F+VFS  ++     +  A+       +R   D   ++ +     GLA++ +
Sbjct: 302 LSPIFKDSDFKVFSGAIADGGYVKGLAVKNGAKAYSRKKIDEKADYIKRYHAKGLAWVKY 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E G  +  GPVA+ L   N EA++    ++ G+   F+A      C      R   A
Sbjct: 362 ---EDGEFS--GPVARFLTDENKEALKKEFGLEGGELVVFVADKWKVCCDALNHLRREFA 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  II    F+F W++D+P +E++E   +   AH+PFTMP      L   D     A  
Sbjct: 417 HETDIIPKGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHARS 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H   +  + F  +G +K     +FG L  A   G PPH G+A 
Sbjct: 477 YDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKRRAYEQFGYLMDALDMGFPPHAGLAI 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           G+DR  M+L    N+R+V+ FP + +  + +M +P+ V+ +QL ++G+++  + +K +K
Sbjct: 537 GLDRFAMMLAQKDNIRDVTAFPKNASASEPMMHAPAPVTDQQLEDIGIQVDPSFEKSVK 595


>gi|312131843|ref|YP_003999183.1| aspartyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908389|gb|ADQ18830.1| aspartyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 581

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 224/593 (37%), Positives = 334/593 (56%), Gaps = 19/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61
           RTH+CG+L +S+V     L GWV ++R  GG+I++D+RD YGITQ++      D+A    
Sbjct: 3   RTHTCGELRMSEVNQSATLCGWVQKIRDKGGMIWIDLRDRYGITQLIFEEGKTDAAVIAK 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+  E+V+   G V  R A+  N  I TG IE+S   I+IL+ A+  P  +  + +  
Sbjct: 63  ARSLGREFVISATGKVQERLAK--NDKIPTGDIEISVDDIQILNPAKLPPFLIEDDTDGG 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R K+R+LDLRR+T+ +N+  R ++    R  M A +FIE  TP+L  S+PEGARDF+
Sbjct: 121 DELRMKFRYLDLRRNTVRQNLALRHKVAQQTRIYMDANDFIEVETPVLIKSTPEGARDFV 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D EM
Sbjct: 181 VPSRMNPGEFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDCEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+D+LN  E ++R +F+     +       R+ Y DA+R YG+DKPD R  +    
Sbjct: 240 SFVEQEDVLNMFEGLIRHLFKTVKGIDLPEV--PRMTYADAMRLYGSDKPDTRFGMQFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAYI 359
           + +      F+VF     V                 R   D + +W +    G  GL YI
Sbjct: 298 LNDLVQGKGFQVFDDAELVVGIKADGC-----AEYTRKQIDELTDWVKRPQIGAKGLVYI 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
               D     +    V K     + +AI  R + + GD    ++G   K      + R  
Sbjct: 353 RVNTDG----SIKSSVDKFYTPEDLQAIAARFEAKPGDLILILSGTKDKARKQLNELRLE 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +   LG+ N   ++  W++DFP  E+ EEE++    H+PFT P+    +L   DL  ++A
Sbjct: 409 MGSRLGLRNPEEYKVLWVLDFPLLEYGEEEQRWFAMHHPFTAPKPEDLALLDKDLGQVRA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG E+  G +R    E+  + F  +G + E  + +FG L  AF+ G PPH G+
Sbjct: 469 NAYDLVINGTEVGGGSVRIFQKELQGKMFEILGFTPEEAKKQFGFLMEAFEYGAPPHAGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G DR+  +  GA ++R+   FP + +  D+++ SPST+  +QL+EL +++ 
Sbjct: 529 AFGFDRLCAIFGGADSIRDFIAFPKNNSGRDVMIDSPSTLHEDQLKELNIQVR 581


>gi|253582252|ref|ZP_04859475.1| aspartate-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251835791|gb|EES64329.1| aspartate-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 595

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 218/600 (36%), Positives = 337/600 (56%), Gaps = 15/600 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           Y+TH+ G+L   ++G  V LSGWV   R  GG+ F+D+RD  G TQV+ + D       E
Sbjct: 3   YKTHNLGELRKENIGQEVILSGWVDTKRDLGGLTFVDMRDREGKTQVIFDIDVAPKDVVE 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
            A+ +++E V+ I G V  R ++  N+N+ TG IE+ A+++ +L+  + LP  + G +  
Sbjct: 63  QAQKLKNESVIRIVGEVKERQSK--NSNMPTGDIEVFAKELVVLNNCDVLPFQISGIDDN 120

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E+IR KYR+LD+RR  +  N+  R ++I ++R  M  E F++  TP+LT S+PEGARD
Sbjct: 121 LNENIRLKYRYLDIRRSRMLHNLKMRHKMIMAIRNFMDKEGFLDIDTPLLTKSTPEGARD 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP R++ G FYALPQ+PQ +KQLLM  G +RYFQ+A CFRDED R+DR   EF QLD+
Sbjct: 181 FLVPCRISPGDFYALPQSPQLFKQLLMIGGVERYFQLAKCFRDEDLRADRQ-FEFVQLDI 239

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV  DD++ T+E + + VF   +    V+  F ++ Y +A+ R+G+DKPD+R  + +
Sbjct: 240 EMSFVTMDDVMRTIEGLAKNVFTAITGEE-VNYTFQKMPYAEAMSRFGSDKPDIRFGVEL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAY 358
            ++TE   +S F+ F + ++     +    P      +R       E A+   G  G+AY
Sbjct: 299 KDLTEIVRNSGFKAFQETVANGGIVKAVVAPQGAEKFSRKIIGEYEEHAKRYFGAKGMAY 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I              P+AK L+    ++I        GD    IA             R 
Sbjct: 359 IKIT-----EEGINSPIAKFLSEDEMKSIVETTGAVKGDIILIIADKAKVVYGALGAIRT 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME-SLKGNDLLSI 477
            I +E  +IN + F+F W++DFP ++++EEE++    H+PFT  +     +       +I
Sbjct: 414 RIGREFNLINPDEFKFLWVVDFPMFQYDEEEQRYKAEHHPFTSIKDEDLNAFLDGQTENI 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +   YD+V NGFEI  G IR    E+  + F  +G++ E  + +FG    AF+ G PPHG
Sbjct: 474 RTNTYDMVLNGFEIGGGSIRIFNPEIQAKVFDRLGLTPEEAKTKFGFFLDAFKYGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+A G+DR +M++L   ++R+V  FP +     L+  +P  V   QL EL L+     +K
Sbjct: 534 GLAFGLDRWLMVMLKENSIRDVIPFPKTNKGQCLMTEAPGEVDEGQLEELYLKSTYVEEK 593


>gi|258653496|ref|YP_003202652.1| aspartyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258556721|gb|ACV79663.1| aspartyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 599

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 233/611 (38%), Positives = 335/611 (54%), Gaps = 24/611 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  + G L  +D G+ V L+GWV R R HGG+IF+D+RD  G+ QVV +        A  
Sbjct: 3   RDRNAGSLRPTDDGTTVTLAGWVARRRDHGGVIFIDLRDASGVAQVVFH-SGEVLAAAHQ 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+ + + G V  R A   N ++ TG IE+ A  +E+LS +  LP  +       E  
Sbjct: 62  LRSEYCVRVTGTVAIRPAGNENPDLPTGAIEVEALTLEVLSESAPLPFQIDDTISVGEET 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR      +  R ++  + R  +    F+E  TP LT S+PEGARDFLVP+
Sbjct: 122 RLKYRYLDLRRAAPAHALRLRAKVSRAARDVLDDAGFVEIETPTLTRSTPEGARDFLVPA 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 182 RLRPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E V+  ++      + +S    RI + +A+ +YG+DKPDLR  + +  +T+
Sbjct: 241 EQDDVIAIGEQVIASLWRLIG--HEISTPIPRISFREAMDKYGSDKPDLRFDLQLTELTD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+    D
Sbjct: 299 YFASTPFRVFQAP------YVGAVVQKGGASTPRRGFDAWQEWAKQRGARGLAYVTIAAD 352

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
             G +   GPVAK+++      +   +  + GD+ FF AG           AR  I +  
Sbjct: 353 --GTLG--GPVAKNISEDERAGLAAAVGAEPGDAVFFGAGTRRSTQELLGAARLEIGRRG 408

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKK---------IDFAHNPFTMPQGGMESLKGNDLL 475
           G+I+ + + F W++D P +E  +E                H+ FT P+         D  
Sbjct: 409 GLIDEDAWSFVWVVDAPLFERTDETDDVTVGGAGSTWTAVHHAFTSPKPECLDTFDTDPG 468

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           S  A+ YD+VCNG EI  G IR H ++V  + F+ +G++ E  + +FG L  AF  G PP
Sbjct: 469 SALAYAYDIVCNGNEIGGGSIRIHRADVQERVFAVMGLTPEDAQTKFGFLLEAFSFGAPP 528

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR-IVEN 594
           HGGIA G DRIVMLL  A ++REV  FP S    D L  +P+ ++ EQ +E G+  +   
Sbjct: 529 HGGIAFGWDRIVMLLAKATSLREVIAFPKSGGGFDPLTAAPAPITPEQRKEAGVDYVPPK 588

Query: 595 PKKILKISVTT 605
           P K  + S  +
Sbjct: 589 PAKATESSTPS 599


>gi|311110842|ref|ZP_07712239.1| aspartate--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|311065996|gb|EFQ46336.1| aspartate--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 614

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 218/602 (36%), Positives = 347/602 (57%), Gaps = 12/602 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           M + RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N DS    
Sbjct: 1   MEK-RTDYAGNITSEYEGQEVNLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGKEL 59

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            +IA S+ +E V+ + G V+ RS  ++N ++ TG++E+ A +I++L+ ++  P  +  + 
Sbjct: 60  MDIADSLNNEDVIEVKGKVVKRS--SVNPDMKTGEVEVDATEIDVLNKSKVPPFEIKDDI 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR TL K I+ R++I+ +         FI+  TPIL  SSPEGAR
Sbjct: 118 NAAEQTRLKYRYLDLRRPTLQKAIMLRSKILKATHEYFDENGFIDIETPILGKSSPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+D
Sbjct: 178 DYLVPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQID 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME SF ++  + +  E +L+ + ++    + +     RI +D+A+ +YG+DKPD R  + 
Sbjct: 237 METSFTDEKQVQDYTEGLLKKIMKDVMGID-LKTPIKRITWDEAMNKYGSDKPDTRYEMF 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +H+++  F  S+F+VFS  ++     +  A+       +R   +   ++ +     GLA+
Sbjct: 296 IHDLSPIFKDSDFKVFSGAIADGGYVKGIAVKNGAKQYSRKKIEEKQDYIKRYHAKGLAW 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           + +   E G  +  GPV++ L   N EA++   D++ G+   F+A             R 
Sbjct: 356 VKY---EDGEFS--GPVSRFLTDENKEALKKEFDLEGGELVVFVADKWKVVTDSLDHLRR 410

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
             A+E GII  N ++F W++D+P +E++E   +   AH+PFTMP      L   D     
Sbjct: 411 EFAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAH 470

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G
Sbjct: 471 ARSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLLDALDMGFPPHAG 530

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +A G+DR  M+L    N+R+V+ FP + +  + +M +P+ V+ +QL ++G+++ +  +  
Sbjct: 531 LAIGLDRFAMMLAQKDNIRDVTAFPKNASASEPMMHAPAPVADQQLDDIGIKVEDKYEDS 590

Query: 599 LK 600
           +K
Sbjct: 591 VK 592


>gi|269217250|ref|ZP_06161104.1| aspartate--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269129387|gb|EEZ60472.1| aspartate--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 592

 Score =  585 bits (1508), Expect = e-165,   Method: Composition-based stats.
 Identities = 229/599 (38%), Positives = 346/599 (57%), Gaps = 18/599 (3%)

Query: 1   MHRYRTH--SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           ++ Y  H  +CG L  +D G+ V L GW    R HGG+IF+D+RD  G TQVV +PD   
Sbjct: 5   LNEYSMHDRTCGQLRAADAGASVVLCGWAWHTRDHGGLIFIDLRDREGYTQVVVDPDCVS 64

Query: 59  ---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
              F  A+ +  E+VL + G V +R+AE +N ++ TG+IE+ A  IE+L+ +   P  + 
Sbjct: 65  AEDFAKAEHLGREYVLKVAGTVRTRAAEAVNPDMPTGEIEVLASAIEVLNTSVTPPFSIE 124

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
              E  E+ R K+R++DLRR  ++ +I  R  +  +MR  +    FIE  TPIL  S+PE
Sbjct: 125 DGIETDETTRMKWRYMDLRRPEMYASIKLRHIVAQAMRSALNERGFIEVETPILANSTPE 184

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARD+LVPSR N G FYALPQ+PQQ+KQ+LM  G +RY+QIA CFRDED R+DR P EF 
Sbjct: 185 GARDYLVPSRPNPGRFYALPQSPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQP-EFT 243

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL--RICYDDAIRRYGTDKPDL 293
           Q+D+EMSFVE+ D+++ ME    GVF+E      V + F   R+ + +A+ R+G D+PD+
Sbjct: 244 QVDIEMSFVEETDVMDMME----GVFKEVLAAAGVEHAFPLTRMPWKEAMDRFGCDRPDV 299

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
           R  + + ++T+      F VFSK +      +        G  +R   +++ + A   G 
Sbjct: 300 RFGMELVDLTDIVAGCGFGVFSKAVEAGGVVKCINAK-GAGDWSRGEIEKLAKVASDNGA 358

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            G+A+I +  D         P+ K L      AI+    ++ GD   F A       +  
Sbjct: 359 KGMAWIAYTADG----KEKSPIIKFLGDEVHAAIKEAAGVEPGDLLLFAADSFDIASAVL 414

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           +  R H+A  LG I+       W++DFP ++++E+EKK    H+PFTM           D
Sbjct: 415 SALRLHMADALG-IDREGHALLWVVDFPMFKFDEDEKKYAAEHHPFTMIPREDWDKIETD 473

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
            L+  ++ YD+V +GFE+  G IR H +E+  +  +  G+  E +E +FG L  A + G 
Sbjct: 474 PLACGSYSYDIVMDGFEMGGGSIRIHDAELQKRVLARCGVDDEDMERKFGHLIHALELGA 533

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           PPHGGIA G+DR+VMLL G +++R+V  FP + +  D + G+PS VS  QL+++ LR++
Sbjct: 534 PPHGGIALGLDRLVMLLAGKQSIRDVIAFPKTSSAADPMTGAPSAVSGRQLKDVSLRLL 592


>gi|123969430|ref|YP_001010288.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|166225376|sp|A2BTS0|SYD_PROMS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123199540|gb|ABM71181.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 598

 Score =  585 bits (1508), Expect = e-165,   Method: Composition-based stats.
 Identities = 222/599 (37%), Positives = 345/599 (57%), Gaps = 16/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R   C +L  +D+G  V L GWV R R HGG+IF+D+RDH G  Q+  NPD     F+ A
Sbjct: 2   RNKICEELNNTDIGKLVNLCGWVDRRRDHGGVIFIDLRDHSGFLQITINPDDGADLFKQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           +++R+E V+ + G++  R  ++IN N+ TG++EL  + ++IL+  +     P+ +     
Sbjct: 62  ETLRNETVIMVSGIINERPKDSINTNLSTGELELKVKDLQILNQIKNNLPFPVSIHDYEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLRR  L +N+ KR +II   R  +    F E  TP+LT S+PEGARD
Sbjct: 122 TKEELRLKYRYLDLRRGKLLENLKKRHKIIKVAREFLDNFGFTEVETPLLTKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP+R++ G F+ALPQ+PQ +KQLLM  G D+Y+QIA CFRDED R+DR P EF QLD+
Sbjct: 182 FLVPARLSNGEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ +++I++  E++++ +++E  N N   N F R+ +  A+  YGTD+PD R  +++
Sbjct: 241 EMSFISEEEIISFNESLIKKIWKEVLNINFN-NAFPRMTWQAAMDNYGTDRPDTRYQMLL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
            ++     +  F +F+K +      +   +       +         + + A+  G  GL
Sbjct: 300 KDLGGVLGNIGFNIFTKAIKSGGYIKSITVKGGNSSISNVRIKPGGDIFKVAQDAGAGGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  + DE   +  +G +  +L+  +   I    + +DGD     AGD           
Sbjct: 360 AFIRVKGDE---LETIGAIKNNLSEEHIADILKITEAKDGDLILLGAGDKQIVNQSLDRV 416

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG---GMESLKGND 473
           R +IA+EL +I+ + + F W+ DFP +E NE+E + +  H+PF  P+            +
Sbjct: 417 RQYIAKELNLIDKSKWNFLWVTDFPMFERNEDENRYEALHHPFCSPKNIKSKDSENLKKE 476

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           + S  A  YDLV NG E+  G +R H + +  Q    VG++ + ++ +FG L  A + G 
Sbjct: 477 IESSTANAYDLVLNGLELGGGSLRIHEANLQRQVLKTVGLTDKEIDEKFGFLIEALEMGA 536

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           PPHGGIA G+DRI ML++GA ++RE   FP +Q    LL  +PS VS  QL+EL + I 
Sbjct: 537 PPHGGIAFGLDRITMLIIGADSIRETIAFPKNQQAKCLLTNAPSNVSESQLKELDIEIT 595


>gi|227513283|ref|ZP_03943332.1| aspartyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083484|gb|EEI18796.1| aspartyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 595

 Score =  585 bits (1508), Expect = e-165,   Method: Composition-based stats.
 Identities = 216/601 (35%), Positives = 337/601 (56%), Gaps = 13/601 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             RT   G +    +G  V L GWV + R  GG+IF+++RD  GI Q+V + +       
Sbjct: 1   MKRTTYAGLVDDKLIGKEVVLKGWVQKRRDLGGLIFIELRDREGIVQLVFSEEFGKDALA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  +R E+V+   G V++R+ + IN  + TG+IE+     +IL+V++  P  +      
Sbjct: 61  VADKLRGEYVVEAKGTVVARAPKEINPKMKTGKIEVDITDAKILAVSKTPPFYIEDGINV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E ++ KYR+LDLRR  +  NI+ R RII S+      E FI+  TP LT S+PEGARD+
Sbjct: 121 SEDLKLKYRYLDLRRPEMQYNILLRNRIIQSIHSFFDGEGFIDIETPTLTKSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  GSFYALPQ+PQQ+KQ+LM +GFD+Y+QIA C+RDED R DR P EF Q+DME
Sbjct: 181 LVPSRVYPGSFYALPQSPQQFKQMLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQIDME 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF +Q++I++  E  +  V ++    + V   F R+ +D+++ R+GTD+PD+R  + + 
Sbjct: 240 MSFADQEEIMDVTEGFIAKVMKDAMGKD-VKLPFKRMDWDESMARFGTDQPDVRFGMELK 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++   + +F+VFS  +      +  A+P      +R   D+   +    G  GLA++ 
Sbjct: 299 DLSDIMKNVDFKVFSGAVENGGQVKAIAVPGGADKYSRKDLDQFASYVERFGAKGLAWLK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              D     +  GP+AK     +  + I  + + + GD   F A +        A  R  
Sbjct: 359 VTDD-----SFNGPIAKFFKDADLRQKILDKAEAKPGDLLLFAADNSRIVADTLAYLRVE 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK---GNDLLS 476
           IA+E  +I+ + F F WI+++P + W+ + K+   AH+PFTMP             D   
Sbjct: 414 IAKEQNMIDESKFAFLWIVNWPLFHWDVDLKRYVAAHHPFTMPNEEDVHYLLNDDEDPHK 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD++ NG E+  G IR H  ++  + F  +G +KE  E++FG    A   G PPH
Sbjct: 474 AYAQSYDIILNGLELGGGSIRIHTRKLQERMFKALGFTKESAESQFGYFLTALDYGFPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR V LL   +N+R+V  FP +    + L  +PS V+ +QL +LG+ +    K
Sbjct: 534 GGLAIGLDRFVRLLADRENIRDVIAFPKNSKAVEPLTSAPSPVANKQLDDLGIFVENQDK 593

Query: 597 K 597
           +
Sbjct: 594 Q 594


>gi|325684224|gb|EGD26400.1| aspartate--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 614

 Score =  585 bits (1508), Expect = e-165,   Method: Composition-based stats.
 Identities = 218/602 (36%), Positives = 342/602 (56%), Gaps = 12/602 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           M + RT  CG++    +   V L GWV RVR  G +IF+D+RD  GI QVV N DS    
Sbjct: 4   MEK-RTDYCGNITSQYLDQDVLLYGWVQRVRNLGQLIFIDLRDREGIVQVVVNHDSGQEL 62

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            ++A S+  E+V+ + G V  RS++  N ++ TG +E+ A +I +L+ A+  P  +  + 
Sbjct: 63  MDVASSLGQEYVVEVKGHVNERSSK--NPDMKTGDVEVIASEITVLNKAKTPPFEIKDDL 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR TL   ++ R +I+ +    +  E FI   TP L  S+PEGAR
Sbjct: 121 VASEQTRLKYRYLDLRRPTLQNALIMRAQIMTATNAYLSGEGFINIETPDLGKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA CFRDED R DR P EF Q+D
Sbjct: 181 DYLVPSRVYPGSFYALPQSPQIFKQLLMGAGFDKYYQIARCFRDEDLRGDRQP-EFTQID 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF++++ +    E +L  V ++    + +     RI + +++ +YG DKPD R  ++
Sbjct: 240 LETSFMDEEGVQEVTEGLLAKVMKDVKGID-LQLPLPRITWQESMDKYGCDKPDTRYEML 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +H++   F  S F+VF+  L         A+       +R   + M ++ +     GLA+
Sbjct: 299 IHDLGNVFAKSGFKVFASALENGGFVRGIAVKGGAKFYSRKKIEAMQDYIKRYHAKGLAW 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           + +   E G+ +  GPV++ L+      +     ++ G+   FIA      C      R 
Sbjct: 359 VKY---EDGDFS--GPVSRFLSEEEKAGLVQEFSLEGGELLLFIADQWKVCCDSLDYLRR 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
             A+E GII  + +++ W++D+P +E++E +++   AH+PFTMP      L   D     
Sbjct: 414 QTAKETGIIPKDTYKYLWVVDWPLFEYDEGDERWIAAHHPFTMPDDKGIELLETDPHKAH 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G IR H  ++  + F  +G +KE    +FG L  A   G PPH G
Sbjct: 474 ARSYDIVLNGYELGGGSIRIHKRDIQEKMFKALGFTKERAYEQFGFLMDALDMGFPPHAG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +A G+DR  MLL G  N+R+V  FP + +  + +M +P+ V+ +QL +LG+++ E  K+ 
Sbjct: 534 LAIGLDRFAMLLAGKDNIRDVIAFPKNASASEPMMHAPAPVADQQLTDLGIKVAEAAKEG 593

Query: 599 LK 600
           ++
Sbjct: 594 VE 595


>gi|188527535|ref|YP_001910222.1| aspartyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|238691926|sp|B2UTL0|SYD_HELPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|188143775|gb|ACD48192.1| aspartyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 577

 Score =  585 bits (1508), Expect = e-165,   Method: Composition-based stats.
 Identities = 220/591 (37%), Positives = 339/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+     + +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAIG--HNISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+    G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVCQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GVKGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+     ++  DL  I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKN----IECKDLEEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|108761988|ref|YP_632850.1| aspartyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108465868|gb|ABF91053.1| aspartyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 606

 Score =  585 bits (1508), Expect = e-165,   Method: Composition-based stats.
 Identities = 229/604 (37%), Positives = 338/604 (55%), Gaps = 16/604 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIA 62
            RTH+CG L  ++VG  V L GWVH  R HGG +F+D+RD  G+TQVV  PD      +A
Sbjct: 10  KRTHTCGQLTATNVGEEVVLFGWVHNRRDHGGAVFIDLRDRDGLTQVVFEPDHAEAHALA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+R E+ + + G V+SR  + +N  + TG+IE+ A  + I + +E  P PV    +  E
Sbjct: 70  GSLRLEYCVGVRGKVVSR-GKNVNPKMKTGEIEVRASDLTIFNRSEPTPFPVEDSIDTSE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R  +RFLDLRR  L  +++ R+++    R  M+   F+E  TP +   +P GAR+FLV
Sbjct: 129 EKRLAHRFLDLRRAPLQHSLMTRSKMNALTRSYMVGNGFLELETPFMGKYTPGGARNFLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYAL ++PQ YKQL M +GFDRYFQI  CFRDED R DR P EF Q+D+EMS
Sbjct: 189 PSRLNAGKFYALAESPQLYKQLFMVAGFDRYFQIVKCFRDEDLRVDRQP-EFTQIDVEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV QDDI   +E +L+ ++ E    +     F+R+ + +++ +YG DKPDLR  +    +
Sbjct: 248 FVTQDDIFTMIEGLLKKLWGEVLGIDI-PTPFMRMDFYESMAKYGNDKPDLRFGLEHVVL 306

Query: 303 T----EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           T    EH       +  + +      +   +PA+    +RA  D++ E+A+  G  GLA 
Sbjct: 307 TDLIREHGEGGGVPMIWEAVQNKGIVKAMVVPAE-KAMSRAESDKLEEFAKQAGAKGLAR 365

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                   G      P++K ++    +AI   +  + GD   F  G      +  A+ R 
Sbjct: 366 AKV---ADGGEWTQSPLSKTISPALRQAINQAVGAKTGDLLLFQFGKEALVHTVMANLRV 422

Query: 419 HIAQELGIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           H+A++LG+I        ++F W+++ P +E+++E      AH+ FT P     +    D 
Sbjct: 423 HVAKKLGLIPEYGSGGQWKFLWVVNPPLFEYDDETNTWAAAHHAFTRPHDEDVAYLLTDP 482

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             +K  +YD+V NGFEI  G IR H  +V  + F  +GIS E    +FG L  A + G P
Sbjct: 483 GRVKCHRYDVVLNGFEIGGGSIRLHDPKVQAEVFKALGISDEDARAKFGFLLDALKFGAP 542

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+ MLL GA+++R+V  FP S+   DL+ G+P  V   QLRE+ +R V  
Sbjct: 543 PHGGIALGMDRLAMLLTGAESLRDVIPFPKSKTGTDLMTGAPGDVDDRQLREIHVRPVPV 602

Query: 595 PKKI 598
             K 
Sbjct: 603 APKA 606


>gi|227524427|ref|ZP_03954476.1| aspartyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088386|gb|EEI23698.1| aspartyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 595

 Score =  585 bits (1508), Expect = e-165,   Method: Composition-based stats.
 Identities = 216/601 (35%), Positives = 337/601 (56%), Gaps = 13/601 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             RT   G +    +G  V L GWV + R  GG+IF+++RD  GI Q+V + +       
Sbjct: 1   MKRTTYAGLVDDKLIGKEVVLKGWVQKRRDLGGLIFIELRDREGIVQLVFSEEFGKDALA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  +R E+V+   G V++R+ + IN  + TG+IE+     +IL+V++  P  +      
Sbjct: 61  VADKLRGEYVVEAKGTVVARAPKEINPKMKTGKIEVDITDAKILAVSKTPPFYIEDGINV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E ++ KYR+LDLRR  +  NI+ R RII S+      E FI+  TP LT S+PEGARD+
Sbjct: 121 SEDLKLKYRYLDLRRPEMQYNILLRNRIIQSIHSFFDGEGFIDIETPTLTKSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  GSFYALPQ+PQQ+KQ+LM +GFD+Y+QIA C+RDED R DR P EF Q+DME
Sbjct: 181 LVPSRVYPGSFYALPQSPQQFKQMLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQIDME 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF +Q++I++  E  +  V ++    + V   F R+ +D+++ R+GTD+PD+R  + + 
Sbjct: 240 MSFADQEEIMDVTEGFIAKVMKDAMGKD-VKLPFKRMDWDESMARFGTDQPDVRFGMELK 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++   + +F+VFS  +      +  A+P      +R   D+   +    G  GLA++ 
Sbjct: 299 DLSDIMKNVDFKVFSGAVENGGQVKAIAVPGGADKYSRKDLDQFASYVERFGAKGLAWLK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              D     +  GP+AK     +  + I  + + + GD   F A +        A  R  
Sbjct: 359 VTDD-----SFNGPIAKFFKDADLRQKILDKAEAKPGDLLLFAADNSRIVADTLAYLRVE 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK---GNDLLS 476
           IA+E  +I+ + F F WI+++P + W+ + K+   AH+PFTMP             D   
Sbjct: 414 IAKEQNMIDESKFAFLWIVNWPLFHWDVDLKRYVAAHHPFTMPNEEDVHYLLNDNEDPHK 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD++ NG E+  G IR H  ++  + F  +G +KE  E++FG    A   G PPH
Sbjct: 474 AYAQSYDIILNGLELGGGSIRIHTRKLQERMFKALGFTKESAESQFGYFLTALDYGFPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR V LL   +N+R+V  FP +    + L  +PS V+ +QL +LG+ +    K
Sbjct: 534 GGLAIGLDRFVRLLADRENIRDVIAFPKNSKAVEPLTSAPSPVANKQLDDLGIFVENQDK 593

Query: 597 K 597
           +
Sbjct: 594 Q 594


>gi|282859635|ref|ZP_06268737.1| aspartate--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587553|gb|EFB92756.1| aspartate--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 585

 Score =  585 bits (1507), Expect = e-165,   Method: Composition-based stats.
 Identities = 221/595 (37%), Positives = 342/595 (57%), Gaps = 20/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT +CG+L ++D G  V LSGWV R R  GG+ F+D+RD YGITQ+V N   D+A   
Sbjct: 1   MYRTKTCGELRLADTGKEVTLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEAEDAALCG 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+ +   G+V  R ++  N  I TG +E+  +++ +LS A   P  +    + 
Sbjct: 61  EANKLGREFCIQAKGIVNERQSK--NDKIETGDVEIIVKELNVLSPALTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR T+ KN+  R ++   +R  + A+NF+E  TPIL  S+PEGARDF
Sbjct: 119 GDELRMKYRYLDLRRATVRKNMELRHKMTIMIRNFLDAQNFMEVETPILIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM +GFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 IVPSRMNPGQFYALPQSPQTLKQLLMIAGFDRYFQIAKCFRDEDLRADRQP-EFTQVDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+QDD++N  E + R +F E            ++ + +A++R+G+DKPDLR  +   
Sbjct: 238 MSFVDQDDVINMFEEMCRVLFREIRGVELPKL--EQMPWQEAMKRFGSDKPDLRFGMEFV 295

Query: 301 NVTEHFVHS-EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
            + +    + EF VF++   +        +       +R   + + ++ +    G  GL 
Sbjct: 296 ELMDDLKGTGEFSVFNEANYIGG-----IVVPNCAEYSRKQLNELTDFVKRPQVGAHGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADA 416
           +I +  D     +    + K  +    + ++     +DGD    ++G  P K  +     
Sbjct: 351 FIKYGADG----SVKSSIDKFYSPEQLQKVKETTGAKDGDLVLILSGEKPNKVRTQLCSL 406

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   LG+ + N F+  WI+DFP +EW++EE+++   H+PFTMP     SL       
Sbjct: 407 RLEMGDRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPADLSLLDEHPDQ 466

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD VCNG E+  G IR H +++  + F  +G +KE  E +FG L  AF+ G PPH
Sbjct: 467 VRALAYDFVCNGIEVGGGSIRIHDTKLQERMFKELGFTKERAEEQFGFLMNAFKYGAPPH 526

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G+A G+DR V ++ G  ++R+   FP + +  D+++ +PS +  +QL EL +++
Sbjct: 527 AGLAFGLDRFVSIMAGLDSIRDCIAFPKNNSGRDVMLDAPSALDPKQLDELQIKL 581


>gi|83814246|ref|YP_446073.1| aspartyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|97196860|sp|Q2S158|SYD_SALRD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|83755640|gb|ABC43753.1| aspartyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 629

 Score =  585 bits (1507), Expect = e-165,   Method: Composition-based stats.
 Identities = 243/604 (40%), Positives = 338/604 (55%), Gaps = 15/604 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACF 59
           H  RTH+CGDL   D G  V L GWV   R HGG++F+D+RD YG+TQVV +P  +   +
Sbjct: 15  HPARTHTCGDLRAEDNGEAVVLKGWVDTRRDHGGLVFVDLRDRYGLTQVVFSPQDNQTAY 74

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+A  +R E V+ + G V  R  E +N ++ TG IE+SA  + +L+ +E  P  V    E
Sbjct: 75  EVAGQLRREDVISVQGTVRPRGEEAVNPDLPTGAIEVSADDLAVLNTSETPPFVVSAHEE 134

Query: 120 ----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                 E +R  +R+LDLRR  L +NI  R R+  +      A +F+E  TP+L  S+PE
Sbjct: 135 RQMNTNEDLRLAHRYLDLRRPDLQENIELRHRLYQTTHRYFDAHDFLEVETPVLMKSTPE 194

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARDFLVPSR++ G FYALPQ+PQ YKQLLM  G DRY QI  CFRDED R+DR P EF 
Sbjct: 195 GARDFLVPSRLHPGRFYALPQSPQTYKQLLMVGGLDRYVQIVKCFRDEDLRADRQP-EFT 253

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           Q+D+EM+F  ++ +    E ++  +++   +   +   F R+ YD+A+R YGTDKPDLR 
Sbjct: 254 QIDVEMTFATEEQVYELTEGLMADLWDTLEDTT-LETPFPRMTYDEALRTYGTDKPDLRF 312

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQP 354
            + +H+V++ F  S FRVF  I+          +P +G  G RA  DR+ +    + G  
Sbjct: 313 DLELHDVSDCFAGSGFRVFDSIVDDGGHIVALRVPGEGDRG-RAAMDRLEDHVTDEIGAA 371

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GL Y     D SG    +   A  L      A   ++  + GD    +AG        A 
Sbjct: 372 GLIYFQLPSDGSGIEQNLSSDA--LPHEYGRAAAEQVGAEAGDLVLTLAGHSPTVFEQAG 429

Query: 415 DARNHIAQELGII---NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
             R H+ +ELG+    +     F W+ DFP  E++EE  +    H+PFT P         
Sbjct: 430 ALRLHMGEELGLRPPADEGDDAFLWVTDFPLMEYDEEAGRPVSMHHPFTAPHPDDLDRLD 489

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D   ++A  YDLV NG EI  G IR H  E  +Q F  +GI +E  ++RFG L  A + 
Sbjct: 490 EDPTQVQARAYDLVLNGNEIGGGSIRIHNHETQMQVFDVLGIDEEEAQDRFGFLLDALRY 549

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR+VMLL GA ++R+V  FP +Q+  + ++ SP  V  EQL  L LR+
Sbjct: 550 GAPPHGGIALGLDRLVMLLAGADSLRDVIAFPKTQSGKEPMVKSPDWVDPEQLETLALRL 609

Query: 592 VENP 595
              P
Sbjct: 610 DLPP 613


>gi|210632325|ref|ZP_03297292.1| hypothetical protein COLSTE_01186 [Collinsella stercoris DSM 13279]
 gi|210159641|gb|EEA90612.1| hypothetical protein COLSTE_01186 [Collinsella stercoris DSM 13279]
          Length = 584

 Score =  585 bits (1507), Expect = e-165,   Method: Composition-based stats.
 Identities = 228/594 (38%), Positives = 339/594 (57%), Gaps = 14/594 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSA 57
           MH   T +CG+L   +VG  V L+GWV R R HGG+IF D+RD  GITQ+  +P   D  
Sbjct: 1   MH---TRTCGELRAENVGEEVTLTGWVSRRRDHGGLIFCDLRDREGITQINFDPEHSDGD 57

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F+IA+++R EW + + G+V  R  + +N  + TG+IE+     ++L+ ++  P  +   
Sbjct: 58  AFKIAETMRPEWPILVHGVVRDRGHDAVNPKLATGEIEVLVDHAQVLNRSKTPPFQIEDG 117

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            E  E  R +YR+LDLRR  +   +  R+    ++R  +    F E  TP L  S+PEGA
Sbjct: 118 IETAEDTRLRYRYLDLRRPEMAARLRLRSDFTFAIRSALHDRAFTEVETPALFKSTPEGA 177

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RDF+VPSR+  G+FYALPQ+PQ  KQLLM  G +RY+Q+A CFRDED R+DR P EF Q+
Sbjct: 178 RDFVVPSRLQPGNFYALPQSPQLLKQLLMVGGVERYYQVAKCFRDEDLRADRQP-EFTQV 236

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFVEQDD+++ +E+VL   F        +     RI Y DA+  YG+DKPD R  +
Sbjct: 237 DIEMSFVEQDDVMSQLEDVLSDAFARVG--VEMPTPLRRISYWDAMDTYGSDKPDTRYGM 294

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + ++T+ F  S F+VF+   +              G   RA  D++ + A + G  GLA
Sbjct: 295 ELVDLTDVFASSAFKVFASAANTQGHVVKAINAKGAGTWPRAQIDKLAKVAATFGAKGLA 354

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +I +R D S N     P+ K       + +R R D++ GD   F AG   +        R
Sbjct: 355 WIAFREDGSMN----SPIVKFFTDEEMDELRRRCDVEPGDLVMFAAGPRRESDEILGGMR 410

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +H+A  L  +     +F W++DFP + W+E+ ++ +  H PFT+P      L   D L +
Sbjct: 411 SHMADALN-VPREGHDFLWVVDFPLFHWDEDGQRYEAEHQPFTLPHLDELHLLDEDPLKM 469

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD V +GFE   GG+R H +E+ L+    +G ++E    +FG L  A + G PP G
Sbjct: 470 GSCTYDFVMDGFEAGGGGMRIHDAELQLKMLEFMGFTEERARAQFGFLMEALEFGAPPMG 529

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G A G+DR+ MLL G  ++R+V  FP + +  DL+  +PS VS+ QL+E+GLR+
Sbjct: 530 GFALGLDRVCMLLAGTDSIRDVMAFPKTSSGSDLMSAAPSKVSLAQLKEVGLRL 583


>gi|227510276|ref|ZP_03940325.1| aspartyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227189928|gb|EEI69995.1| aspartyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 595

 Score =  585 bits (1507), Expect = e-165,   Method: Composition-based stats.
 Identities = 216/601 (35%), Positives = 335/601 (55%), Gaps = 13/601 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             RT   G +    +G  V L GWV + R  GG+IF+++RD  GI Q+V + +       
Sbjct: 1   MKRTTYAGLVDDKLIGKEVVLKGWVQKRRDLGGLIFIELRDREGIVQLVFSEEFGKDALA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A  +R E+V+   G V++R+ + IN  + TG+IE+     +IL+V++  P  +      
Sbjct: 61  VADKLRGEYVVEAKGTVVARAPKEINPKMKTGKIEVDITDAKILAVSKTPPFYIEDGINV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E ++ KYR+LDLRR  +  NI+ R RII S+      E FI+  TP LT S+PEGARD+
Sbjct: 121 SEDLKLKYRYLDLRRPEMQYNILLRNRIIQSIHSFFDGEGFIDIETPTLTKSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  GSFYALPQ+PQQ+KQ+LM +GFD+Y+QIA C+RDED R DR P EF Q+DME
Sbjct: 181 LVPSRVYPGSFYALPQSPQQFKQMLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQIDME 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF +Q++I++  E  +  V ++    + V   F R+ +D+++ R+GTD+PD+R  + + 
Sbjct: 240 MSFADQEEIMDVTEGFIAKVMKDAMGKD-VKLPFKRMDWDESMARFGTDQPDVRFGMELK 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++     +F+VFS  +      +  A+P      +R   D+   +    G  GLA++ 
Sbjct: 299 DLSDIMKDVDFKVFSGAVENGGQVKAIAVPGGADKYSRKDLDQFASYVERFGAKGLAWLK 358

Query: 361 WRLDESGNVAGMGPVAKHLNIVNT-EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
              D     +  GP+AK     +  + I  + + + GD   F A +        A  R  
Sbjct: 359 VTDD-----SFNGPIAKFFKDADLRQKILDKAEAKPGDLLLFAADNSRIVADTLAYLRVE 413

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK---GNDLLS 476
           IA+E  +I+ + F F WI+++P + W+ + K+   AH+PFTMP             D   
Sbjct: 414 IAKEQNMIDESKFAFLWIVNWPLFHWDVDLKRYVAAHHPFTMPNEEDVHYLLNDDEDPHK 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD++ NG E+  G IR H  ++  + F  +G +KE  E +FG    A   G PPH
Sbjct: 474 AYAQSYDIILNGLELGGGSIRIHTRKLQERMFKALGFTKESAEAQFGYFLTALDYGFPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR V LL   +N+R+V  FP +    + L  +PS V+ +QL +LG+ +    K
Sbjct: 534 GGLAIGLDRFVRLLADRENIRDVIAFPKNSKAVEPLTSAPSPVANKQLDDLGIFVENQDK 593

Query: 597 K 597
           +
Sbjct: 594 Q 594


>gi|296170800|ref|ZP_06852371.1| aspartate--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894536|gb|EFG74274.1| aspartate--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 587

 Score =  585 bits (1507), Expect = e-164,   Method: Composition-based stats.
 Identities = 229/600 (38%), Positives = 330/600 (55%), Gaps = 26/600 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+ G L  SD G  V L+GWV R R HGG+IF+D+RD  G+ QVV   +S     A  
Sbjct: 3   RSHAAGSLRRSDAGQQVTLAGWVARRRDHGGVIFIDLRDASGVAQVVF-RESDVLAQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R     N  I TG IE++A ++ +L  +    LP   +    E +
Sbjct: 62  LRAEFCVAVTGVVEVRPEGNANPEIATGDIEVNAAELTVLGESAP--LPFQLDEPAGEEL 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRRD     +  R+ +  + R  +   +F+E  TP +T S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRRDGPAAALRLRSDVNAAARAVLARHDFVEIETPTITRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 180 RLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +DI+   E +L  ++        +     RI Y DA+RR+G+DKPD+R  + +   TE
Sbjct: 239 DAEDIIAISEEILTALWALIG--YRLPTPIPRITYADAMRRFGSDKPDMRFGLELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 297 FFKDTTFRVFQAP------YVGAVVMPGGASQPRRTLDGWQEWAKQRGHRGLAYVL--VA 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G +   GPVAK+L+    + +   +  Q GD  FF AG P    +    AR  IA  L
Sbjct: 349 DDGTLG--GPVAKNLSDAERDGLAAHVGAQPGDCIFFSAGPPKSSRALLGAARGEIAARL 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
            +I+ + + F W++D P +E  +E                 H+ FT P+   E +   D 
Sbjct: 407 DMIDPDAWAFVWVVDPPLFEPADEATAAGDVAVGSGAWTAVHHAFTSPKPEFEDVVDTDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             + A  YD+VCNG EI  G IR H  ++  + F+ +G+ +   E +FG L  AF  G P
Sbjct: 467 GRVLADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDRAEAEEKFGFLLEAFTFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRI  LL    ++REV  FP +    D L  +P+ ++ +Q +E G+    +
Sbjct: 527 PHGGIAFGWDRINALLSRVDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESGIDAKPD 586


>gi|152966984|ref|YP_001362768.1| aspartyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189082102|sp|A6WCG5|SYD_KINRD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|151361501|gb|ABS04504.1| aspartyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 598

 Score =  585 bits (1507), Expect = e-164,   Method: Composition-based stats.
 Identities = 231/602 (38%), Positives = 324/602 (53%), Gaps = 20/602 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L+GWV R R HGG+ FLD+RD  G+ QVVA  +      A+ 
Sbjct: 3   RTHEAGSLRADHAGQTVTLTGWVARRRDHGGVAFLDLRDASGVVQVVARDEILDAGGARE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + I G V  R     NANI TG +E+    +E+LS A  LP  +       E  
Sbjct: 63  LRNEYCIRITGDVRLRPEGNDNANIPTGAVEVDTTALEVLSEAAPLPFQIDDHLNVGEEA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R K+R+LDLRR      +  R+    + R  +    F E  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKHRYLDLRRTGPANALKLRSAANRAARAVLEEHAFTEIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM +G +RY+Q+A C+RDED R+DR P EF QLD+EMSFV
Sbjct: 183 RLAPGSWYALPQSPQLFKQLLMVAGMERYYQLARCYRDEDFRADRQP-EFTQLDIEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD++   E ++  +++     + V     R+ Y++A+RRYG+DKPDLR  + +     
Sbjct: 242 EQDDVIALGEQIVAALWKLIG--HDVPLPLPRMTYEEAMRRYGSDKPDLRFGLELVECAG 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 300 FFADTTFRVFQAP------YVGAVVMPGGASQPRKTLDAWQEWAKQRGARGLAYVL--VG 351

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G ++  GPVAK+L+      +   +    GD  FF AG      +    AR  IA+  
Sbjct: 352 QDGELS--GPVAKNLSDTERAGLAAHVGANPGDCIFFAAGAVNPSRALLGAARAEIARRT 409

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE-------EKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           G I+ + + F W++D P ++   E       E   +  H+ FT P+  +      D  S 
Sbjct: 410 GAIDESAWSFLWVVDAPMFKSAAEDDDVSIGEGSWNAVHHAFTAPKPEVVDTFDTDPGSA 469

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD+VCNG EI  G IR H  +V  + F+ +GIS+     +FG L  AF  G PPHG
Sbjct: 470 LSNAYDIVCNGNEIGGGSIRIHRRDVQERVFAVMGISEADAREKFGFLLDAFSFGAPPHG 529

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           GIA G DR+V LL G  ++REV  FP S    D L  +P+ ++ +Q +E G+      KK
Sbjct: 530 GIAFGWDRVVALLAGVDSIREVIAFPKSGGGYDPLTAAPAPITAQQRKEAGVDAKPETKK 589

Query: 598 IL 599
             
Sbjct: 590 AA 591


>gi|254516712|ref|ZP_05128771.1| aspartyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219675135|gb|EED31502.1| aspartyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 570

 Score =  584 bits (1506), Expect = e-164,   Method: Composition-based stats.
 Identities = 212/572 (37%), Positives = 322/572 (56%), Gaps = 7/572 (1%)

Query: 27  VHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAKSVRSEWVLCIDGLVMSRSAETI 85
           + R R HGG+IFLD+RD  GI QVV +PD    F  A  VRSE+VL + G V +RS  T+
Sbjct: 1   MDRRRDHGGVIFLDLRDREGIVQVVFDPDTEEHFATADRVRSEYVLKVTGRVRARSDATV 60

Query: 86  NANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKR 145
           N ++ TG+IE+  ++IE+L+ A   P  +       E +R +YR++DLRR  + + +  R
Sbjct: 61  NPSMDTGEIEVLGKEIEVLNTAATPPFQLDEHTSVGEEVRLRYRYMDLRRPEMQQRLRLR 120

Query: 146 TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
           +R+ +++R  +  E F++  TPILT ++PEGARD+LVPSR + G F+ALPQ+PQ +KQLL
Sbjct: 121 SRVTDAVRRFLHEEGFLDIETPILTRATPEGARDYLVPSRTHPGQFFALPQSPQLFKQLL 180

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           M SGFDRY+QIA CFRDED R+DR P EF Q+D+E SF+++  I+   E ++RG+F+   
Sbjct: 181 MVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSFLDEAAIMEITERMVRGLFQSVL 239

Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
           +    S  F  + + +A+ R+G+DKPDLR P+ + +V +     +F+VF        G  
Sbjct: 240 DVELPS--FPHMTWAEAMERFGSDKPDLRIPLELVSVDDLMQQVDFKVFRGPADDPLGRV 297

Query: 326 VWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE 385
                  G   +R   D    +  + G  GLA+I      +G      P+ K +      
Sbjct: 298 AALRVPGGASISRKEIDDYTRYVGNYGARGLAWIKVNDLAAGVEGLQSPILKFMPDDVVA 357

Query: 386 AIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEW 445
            +  RL+  DGD  FF A             R  +  + G+++   +   W++DFP +E 
Sbjct: 358 QMMSRLEAADGDIIFFGADRASIVNEALGALRIKVGADQGLVSEG-WAPLWVVDFPMFE- 415

Query: 446 NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML 505
           ++        H+PFT P   + +L  +      +  YD+V NG E+  G +R H  E   
Sbjct: 416 DDGNGGWTPLHHPFTAPACDLSTLSQH-PGEALSRAYDMVLNGTELGGGSVRIHNLETQE 474

Query: 506 QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             F  +GI +E    +FG L  A + G PPHGG+A G+DRIVML+ G+ ++R+V  FP +
Sbjct: 475 AVFDILGIDREEAREKFGFLLDALKYGAPPHGGLAFGLDRIVMLMTGSASIRDVIAFPKT 534

Query: 566 QNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           Q    ++  +P TV   QLR+L +R+ E  KK
Sbjct: 535 QTAACVMTEAPGTVGAAQLRDLHIRLREPEKK 566


>gi|300775946|ref|ZP_07085806.1| aspartate--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300505496|gb|EFK36634.1| aspartate--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 584

 Score =  584 bits (1506), Expect = e-164,   Method: Composition-based stats.
 Identities = 209/594 (35%), Positives = 334/594 (56%), Gaps = 19/594 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACF 59
            +R+H+ G+L + ++   V LSGWV  +R  G +I++D+RD YGITQ+V + +       
Sbjct: 1   MFRSHTNGELSLKNLNEEVTLSGWVQTIRDKGFMIWVDLRDRYGITQLVFDQERSSAQLM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E AK +  E+V+   G V+ R ++  N NI TG+IE+  +K+ IL+ ++  P  +  E +
Sbjct: 61  EEAKKLGREFVIQATGKVIERVSK--NPNIPTGEIEILVEKLTILNDSQLPPFTIEDETD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR+ +   ++ R ++   +R  +  E FIE  TP+L  S+PEGARD
Sbjct: 119 GGEELRMKYRYLDIRRNPVKDKLIFRHKMAQKVRNYLSDEGFIEVETPVLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNPGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+D++N  E + + + ++ +       +F R+ + DA+R+YG DKPD+R  +  
Sbjct: 238 EMAFVEQEDVMNVFEGMTKTLLKDITGQEF--GDFPRMTFADAMRKYGNDKPDIRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             + E     +F++F     V                 R   D + +W +    G  G+ 
Sbjct: 296 VELNELVKGKDFKIFDDAELVVGINVEGC-----AEYTRKQIDELVDWVKRPQIGASGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ ++ D          V K  N  +   I  +   ++GD    ++G+  K  +  +  R
Sbjct: 351 WVKFQNDGVK----TSSVNKFYNEEDLAKIIEKFGAKEGDLMLILSGNENKVRAQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +   LG+   N F   W++DFP  EW+EE ++    H+PFT P+     L   D    
Sbjct: 407 MELGNRLGLRKGNEFAPLWVVDFPLLEWDEETERYHAMHHPFTSPKPEDIHLLETDPGKA 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG EI  G IR    ++  + F  +G ++E  E +FG L  AF+ G PPHG
Sbjct: 467 RANAYDMVLNGNEIGGGSIRIFDKDLQSKMFDLLGFTREEAEAQFGFLMNAFKYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G+A G DR+V +L G + +R+   FP + +  D+++ +P++++  QL EL L++
Sbjct: 527 GLAFGFDRLVAILDGNEVIRDYIAFPKNNSGRDVMIDAPASIADAQLDELELQL 580


>gi|116629515|ref|YP_814687.1| aspartyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|116095097|gb|ABJ60249.1| aspartyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
          Length = 617

 Score =  584 bits (1506), Expect = e-164,   Method: Composition-based stats.
 Identities = 218/602 (36%), Positives = 347/602 (57%), Gaps = 12/602 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           M + RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N DS    
Sbjct: 4   MEK-RTDYAGNITSEYEGQEVNLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGKEL 62

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            +IA S+ +E V+ + G V+ RS  ++N ++ TG++E+ A +I++L+ ++  P  +  + 
Sbjct: 63  MDIADSLNNEDVIEVKGKVVKRS--SVNPDMKTGEVEVDATEIDVLNKSKVPPFEIKDDI 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR TL K I+ R++I+ +         FI+  TPIL  SSPEGAR
Sbjct: 121 NAAEQTRLKYRYLDLRRPTLQKAIMLRSKILKATHEYFDENGFIDIETPILGKSSPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+D
Sbjct: 181 DYLVPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQID 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME SF ++  + +  E +L+ + ++    + +     RI +D+A+ +YG+DKPD R  + 
Sbjct: 240 METSFTDEKQVQDYTEGLLKKIMKDVMGID-LKTPIKRITWDEAMNKYGSDKPDTRYEMF 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +H+++  F  S+F+VFS  ++     +  A+       +R   +   ++ +     GLA+
Sbjct: 299 IHDLSPIFKDSDFKVFSGAIADGGYVKGIAVKNGAKQYSRKKIEEKQDYIKRYHAKGLAW 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           + +   E G  +  GPV++ L   N EA++   D++ G+   F+A             R 
Sbjct: 359 VKY---EDGEFS--GPVSRFLTDENKEALKKEFDLEGGELVVFVADKWKVVTDSLDHLRR 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
             A+E GII  N ++F W++D+P +E++E   +   AH+PFTMP      L   D     
Sbjct: 414 EFAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAH 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G
Sbjct: 474 ARSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLLDALDMGFPPHAG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +A G+DR  M+L    N+R+V+ FP + +  + +M +P+ V+ +QL ++G+++ +  +  
Sbjct: 534 LAIGLDRFAMMLAQKDNIRDVTAFPKNASASEPMMHAPAPVADQQLDDIGIKVEDKYEDS 593

Query: 599 LK 600
           +K
Sbjct: 594 VK 595


>gi|117928541|ref|YP_873092.1| aspartyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|166225311|sp|A0LUJ6|SYD_ACIC1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|117649004|gb|ABK53106.1| aspartyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 592

 Score =  584 bits (1506), Expect = e-164,   Method: Composition-based stats.
 Identities = 229/589 (38%), Positives = 328/589 (55%), Gaps = 20/589 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  +D GS V L+GWV R R  GG++FLD+RD  GI QVVA  +    ++A  
Sbjct: 3   RTHEAGTLRPADAGSRVVLAGWVARRRDLGGVVFLDLRDASGIVQVVA-REGVAGQVASR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E+ L + G V  R A   N  + TG +E+ A +IE+LS A  LP PV G  E  E  
Sbjct: 62  VRAEFCLRVAGEVRLRPAGNENPELETGDVEVVADEIEVLSEAAPLPFPVTGPVEVNEET 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR    + +  R+ +    R  M    F+E  TP LT S+PEGARDFLVP+
Sbjct: 122 RLKYRYLDLRRPGPARALRLRSEMNRLAREVMARHRFVEVETPYLTRSTPEGARDFLVPA 181

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM +G +RY+Q+A CFRDED R+DR P EF QLD+EMSFV
Sbjct: 182 RLQPGHWYALPQSPQLFKQLLMVAGLERYYQLARCFRDEDFRADRQP-EFTQLDIEMSFV 240

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +DD++   E+V+  ++ + +    ++    R+ Y +A+RR+G+DKPDLR    + ++T+
Sbjct: 241 TEDDVMALAEDVIATLWSQLAGVE-LALPLPRLTYAEAMRRFGSDKPDLRFGQEIVDLTK 299

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  +  R+F         Y    +   G G +R+  D    +ARS+G  GLAY+     
Sbjct: 300 FFAGTSLRIFQAP------YVGAVVMPGGAGQSRSELDEWTTFARSRGAKGLAYVLV--- 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
                   GP+AK+L+      +      + GD+ FF AG+           R  IA+  
Sbjct: 351 ---GAELTGPIAKNLSDAERAGLPAATGARPGDAIFFAAGEQRASQELLGAVRLEIARRC 407

Query: 425 GIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + +       +  CWI+D P +E +         H+PFT P+        +      A 
Sbjct: 408 RLTDPASGAPAWSLCWIVDPPLFEPD-GAGGWTSVHHPFTAPKPEWMDRFADKPGEALAA 466

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H ++V  + F  +GIS+     +FG L  AF+ G PPHGGIA
Sbjct: 467 AYDIVANGNEIGGGSIRIHRADVQQRVFEVLGISEAEANAKFGFLLEAFRYGPPPHGGIA 526

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            G DRI  LL G +++R+V  FP + +  D L G+P+ ++ EQ +E G+
Sbjct: 527 FGWDRIAALLAGVESIRDVIAFPKTASGTDPLTGAPTPITPEQRKEAGI 575


>gi|315038169|ref|YP_004031737.1| aspartyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276302|gb|ADQ58942.1| aspartyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 617

 Score =  584 bits (1506), Expect = e-164,   Method: Composition-based stats.
 Identities = 221/602 (36%), Positives = 345/602 (57%), Gaps = 11/602 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT  CG++    +G  V L GWV RVR  G ++F+D+RD  G+ Q+V N DS     +IA
Sbjct: 7   RTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGKELMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E+VL + G V+ RS   +N ++ TGQ+E+ A +I IL+ A+  P  +    +  E
Sbjct: 67  DSLGNEYVLQVKGKVVKRSE--VNPDMKTGQVEVDATEIIILNKAKNPPFEIKNGVDISE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DMEMS
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMEMS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +++ I    E +L+ + ++    + +     RI + DA+ +YG+DKPD R  +++H++
Sbjct: 244 FADEETIQGYTEGLLKKIMKDVKGID-LKTPIKRITWTDAMNKYGSDKPDTRYGMLIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +  F  S+F+VFS  ++     +  A+       +R   D+  ++ +     GLA++ + 
Sbjct: 303 SSIFKDSDFKVFSGAIADGGFVKGIAVKNGAKEYSRKKLDKKADFIKRFHAKGLAWVKY- 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G  +  GPVA+ L   N EA++   D++ G+   F+A      C      R   A+
Sbjct: 362 --EDGEFS--GPVARFLTDDNKEALKKEFDLEGGELVVFVADKWKVICDSLNHLRREFAK 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E GII    ++F W++D+P +E++E   +   AH+PFTMP      L   +     A  Y
Sbjct: 418 ETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHKAHARSY 477

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H   +    F  +G +K+    +FG L  A   G PPH G+A G
Sbjct: 478 DIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPHAGLAIG 537

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           +DR  M+L    N+R+V  FP + +  + +M +P+ V+ +QL +LG+ + +  +  +K +
Sbjct: 538 LDRFAMMLADKDNIRDVLAFPKNASASEPMMHAPAPVADQQLADLGIEVEDKYQDSVKAT 597

Query: 603 VT 604
             
Sbjct: 598 EE 599


>gi|104773943|ref|YP_618923.1| aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|103423024|emb|CAI97710.1| Aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 614

 Score =  584 bits (1506), Expect = e-164,   Method: Composition-based stats.
 Identities = 218/602 (36%), Positives = 341/602 (56%), Gaps = 12/602 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           M + RT  CG++    +   V L GWV RVR  G +IF+D+RD  GI QVV N DS    
Sbjct: 4   MEK-RTDYCGNITSQYLDQDVLLYGWVQRVRNLGQLIFIDLRDREGIVQVVVNHDSGQEL 62

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            ++A S+  E+V+ + G V  RS++  N ++ TG +E+ A +I +L+ A+  P  +  + 
Sbjct: 63  MDVASSLGQEYVVEVKGHVNERSSK--NPDMKTGDVEVIASEITVLNKAKTPPFEIKDDL 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR TL   ++ R +I+ +    +  E FI   TP L  S+PEGAR
Sbjct: 121 VASEQTRLKYRYLDLRRPTLQNALIMRAQIMTATNAYLSGEGFINIETPDLGKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA CFRDED R DR P EF Q+D
Sbjct: 181 DYLVPSRVYPGSFYALPQSPQIFKQLLMGAGFDKYYQIARCFRDEDLRGDRQP-EFTQID 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF++++ +    E +L  V ++    + +     RI + +++ +YG DKPD R  ++
Sbjct: 240 LETSFMDEEGVQEVTEGLLAKVMKDVKGID-LQLPLPRITWQESMDKYGCDKPDTRYEML 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +H++   F  S F+VF+  L         A+       +R   + M ++ +     GLA+
Sbjct: 299 IHDLGNVFAKSGFKVFASALENGGFVRGIAVKGGAKFYSRKKIEAMQDYIKRYHAKGLAW 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           + +   E G+ +  GPV++ L+      +     ++ G+   FIA      C      R 
Sbjct: 359 VKY---EDGDFS--GPVSRFLSEEEKAGLVQEFSLEGGELLLFIADQWKVCCDSLDYLRR 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
             A+E GII  + +++ W++D+P +E++E +++   AH+PFTMP      L   D     
Sbjct: 414 QTAKETGIIPKDTYKYLWVVDWPLFEYDEGDERWIAAHHPFTMPDDKGIELLETDPHKAH 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G IR H  ++  + F  +G +KE    +FG L  A   G PPH G
Sbjct: 474 ARSYDIVLNGYELGGGSIRIHKRDIQEKMFKALGFTKERAYEQFGFLMDALDMGFPPHAG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +A G+DR  MLL G  N+R+V  FP + +  + +M +P+ V+ +QL +LG+ + E  K+ 
Sbjct: 534 LAIGLDRFAMLLAGKDNIRDVIAFPKNASASEPMMHAPAPVADQQLTDLGIEVAEAAKEG 593

Query: 599 LK 600
           ++
Sbjct: 594 VE 595


>gi|163786609|ref|ZP_02181057.1| aspartate--tRNA ligase [Flavobacteriales bacterium ALC-1]
 gi|159878469|gb|EDP72525.1| aspartate--tRNA ligase [Flavobacteriales bacterium ALC-1]
          Length = 584

 Score =  584 bits (1506), Expect = e-164,   Method: Composition-based stats.
 Identities = 213/592 (35%), Positives = 328/592 (55%), Gaps = 15/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACF 59
            YR+H+CG+L  +   + V LSGWV  VR  G +I++D+RD YGITQ+  + +       
Sbjct: 1   MYRSHNCGELRTAHSNTEVTLSGWVQGVRDKGFMIYVDLRDRYGITQLYFDEEQSSKTLL 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A+ +  E+V+ + G V  R ++  N NI TG IE+   ++ IL+ +   P  +  + +
Sbjct: 61  EQAQKLGREFVIQVKGKVQERISK--NPNIPTGDIEVLVSELNILNASLVPPFTIEDKTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + +R KYR+LD+RR+ + ++++ R ++   +R  +  + FIE  TP L  S+PEGARD
Sbjct: 119 GGDDLRMKYRYLDIRRNPVKESLIFRAKVTQEVRNYLSGDGFIEVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGEFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DILN  E + R + +E +        F R+ YDDA+R YG DKPD+R  +  
Sbjct: 238 EMAFVEQEDILNVFEGLTRHLLKEVNGVEIEK--FPRMLYDDAMRLYGNDKPDIRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +     H +F VF+    V            G    R   D++ +W +      L  +
Sbjct: 296 GELNAVTQHKDFNVFNNAELVVG-----IAVPGGNSYTRKEIDKLIDWVKRPQVGALGMV 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R ++ G  +    V K  +  +          + GD    ++G+  K  +  +  R  
Sbjct: 351 YSRCNDDG--SYKSSVDKFYDQDDLAKWAEVTGAKAGDLICVLSGETNKVRAQLSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ +G+ +   F   W++DFP  E +EE       H+PFT P+ G   L       +KA
Sbjct: 409 LAERIGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDTKPGEVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H   +      ++G S+E    +FG L  AF+ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKAIQAIMLKHLGFSEEEARAQFGFLMDAFEYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DR+V +L G + +R+   FP + +  D+++ +P+ +  EQL EL L++
Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAPIDDEQLEELSLKL 580


>gi|88809467|ref|ZP_01124975.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetase, class I
           [Synechococcus sp. WH 7805]
 gi|88786686|gb|EAR17845.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetase, class I
           [Synechococcus sp. WH 7805]
          Length = 611

 Score =  584 bits (1506), Expect = e-164,   Method: Composition-based stats.
 Identities = 216/599 (36%), Positives = 336/599 (56%), Gaps = 16/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL    +   V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSNGCGDLRKQHIDDTVQLCGWVDRRRDHGGVIFIDLRDRTGTVQITVDPDLGAEAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           + +RSE VL I G V +R AE++N  + TG +E+ A  I +L+  +     P+ V  E  
Sbjct: 62  EHLRSETVLQISGKVRARPAESLNEKLATGAVEVLASGISVLNSVKGNLPFPVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR  ++ N+  R + I + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRAQTIQAARRFLENEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YVLPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF++Q+ IL   E+++  +++       +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 241 EMSFMDQEQILQLNESLICSIWKAVKGVE-LPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNEWARSQGQPGLAY 358
            NV++      F+VFS  +      +  A+P      +        + ++ +Q       
Sbjct: 300 TNVSDIVKDMGFKVFSGAVKSGGSVKCIAVPGGNDALSNVRIKPGGDVFSEAQAAGAGGL 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
            F R+ + G +  +G +  +L+    + +  R   + G    F AGD           R 
Sbjct: 360 AFIRVRDGGEIDTIGAIKDNLSDEQKQELLSRTGAEPGTLLLFGAGDTATVNKALDRVRQ 419

Query: 419 HIAQELGIINCN----CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM----ESLK 470
           ++A+ELG++  +     + F W++DFP +E+N +E + +  H+PF  P        E+  
Sbjct: 420 YLAKELGMVKPDRDNDQWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNQEDLGSNETEW 479

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
              L + +A  YDLV NG E+  G +R H S +  Q    VG+  E  + +FG L  A  
Sbjct: 480 ETTLPTARAQAYDLVLNGLELGGGSLRIHDSSLQRQVLQTVGLPLEEAQEQFGFLMDALD 539

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            G PPHGG+A GIDR+VMLL G +++R+   FP +Q    L+  +P  V+ +QL EL +
Sbjct: 540 VGAPPHGGLAFGIDRMVMLLAGEESIRDTIAFPKTQQARCLMTNAPGGVADKQLEELHV 598


>gi|223039849|ref|ZP_03610133.1| aspartyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878858|gb|EEF13955.1| aspartyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 583

 Score =  584 bits (1506), Expect = e-164,   Method: Composition-based stats.
 Identities = 248/596 (41%), Positives = 345/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           R+H C DL  +D+G  V L GWV+  R HGG+IFLD+RD  G+ Q+V +P    +  E+A
Sbjct: 2   RSHYCTDLSSADIGKEVTLCGWVNTYRDHGGVIFLDLRDRTGLIQIVCDPADSKSSHEVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL I G V +R    +N  + TG+IE+ A ++ + + +E LP  V G+    E
Sbjct: 62  SHVRDEYVLRIKGKVRARGEGLVNPRLKTGEIEVVADEVIVENPSEPLPF-VIGDESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLDLR + L      R++   + R  +    FIE  TPILT ++PEGARD+LV
Sbjct: 121 DIRLKYRFLDLRNEKLQNIFKMRSKAAIAARNSLDKMGFIEFETPILTRATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVYPGQFYALPQSPQLFKQLLMCSGFDKYFQIAKCFRDEDLRADRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+EQ+DILN  EN+L+ VF        +   F R+ Y +A   YG+DKPDLR  + M++V
Sbjct: 240 FIEQEDILNMAENMLKDVFAACG--YDIQIPFRRMSYKEATESYGSDKPDLRYDLKMNDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +FSKI S      + A+    G    ++   +R  E+ R  G  GL Y  
Sbjct: 298 IDIFARSSNEIFSKIASEPKKNRIKALKVPNGDNIFSKREMNRFEEFVRKFGAQGLGYFQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + +        GP+ K     + + I  R +++ GD  FF AG       +    R  +
Sbjct: 358 MKEN-----GLKGPLCKFFEQSDLDEIVERCELKVGDVVFFGAGKKKVVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++GII+ N  EF W++DFP +E N++       H+PFTMP+   E     DL  I + 
Sbjct: 413 AEQMGIIDQNKMEFLWVLDFPMFEQNDD-GSYSAMHHPFTMPKNIDE----PDLEDILSV 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +D+V NG+E+  G +R H ++V  + F  +GI +     +FG L  A   G PPHGGIA
Sbjct: 468 AHDVVLNGYELGGGSVRIHKNDVQQKVFKLLGIDEAEQREKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G DR+ ML+    ++R+V  FP +Q     L  +PS  S EQLRELGLR+ E  K
Sbjct: 528 IGFDRLNMLVNKTSSIRDVIAFPKTQRAQCPLTKAPSEASGEQLRELGLRLREKEK 583


>gi|261417215|ref|YP_003250898.1| aspartyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373671|gb|ACX76416.1| aspartyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 597

 Score =  584 bits (1506), Expect = e-164,   Method: Composition-based stats.
 Identities = 225/604 (37%), Positives = 334/604 (55%), Gaps = 14/604 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FE 60
             RTH+CG L   DVG  V L+GWV R R HGG+IF+D+RD YG TQ+V NPD      +
Sbjct: 1   MKRTHNCGQLRKEDVGQTVTLAGWVDRRRDHGGVIFVDLRDKYGKTQIVFNPDYNADVLK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP---LPVFGE 117
            A+ +R+E+V+ + G V +R     N  + TG+IE+ A K+EIL+ A   P        E
Sbjct: 61  TAEQLRNEYVIYVTGKVYAREEGNTNEKLATGEIEVKADKLEILNAALTSPLAINDPNEE 120

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +  + +R +YR+LDLRR  + K ++ ++R + ++     +  F    TP L  S+PEGA
Sbjct: 121 CKENDDLRLQYRYLDLRRPWIQKKLLLKSRFLKAVYDFFYSNGFENIETPCLCKSTPEGA 180

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRVN G FYALPQ+PQQYKQLLM +G DRYFQIA CFRDED R+DR P EF Q+
Sbjct: 181 RDYLVPSRVNPGKFYALPQSPQQYKQLLMIAGMDRYFQIAKCFRDEDLRADRQP-EFTQI 239

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV QD+++   +  +  V  +  N      +  R+ + +A+ +YG+DKPDLR  +
Sbjct: 240 DVEMSFVNQDEVMEMFDKFVTEVLGKVWNFE-PPRHIRRMKWAEAMLKYGSDKPDLRFDL 298

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            +H+V+E    S F VF   ++        A         R   D +  +    G  GL 
Sbjct: 299 EIHDVSEIGAKSNFGVFKNCVAAGGKIRGIAAKGCVD-FTRKQIDELTAYVAKYGSKGLV 357

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++  + ++         V K         +R  +  + GD  FFIAG      +     R
Sbjct: 358 WMRVKENDEVETQ----VGKFFTTEQLNELRDAVGAKCGDMMFFIAGPEKIAATAMGQLR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLS 476
             +A+  G+ +    EF WI +FP +E+++ E +    H+PFT P      +  G +L  
Sbjct: 414 LEVARIKGLRDPKKREFVWITEFPMFEYSDTEGRYMAMHHPFTNPLPEHLDMMLGGNLKD 473

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YDLV NG EI  G IR H  EV  + F  +G+S+E V+ +FG    AF+ G PPH
Sbjct: 474 CNAEAYDLVLNGVEIGGGSIRIHNPEVQEKVFRLLGLSEEQVKTKFGFFVDAFKYGAPPH 533

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V  + G +++R+   FP + +    +   PS V ++QL+++ + + + PK
Sbjct: 534 GGLAFGLDRVVATMEGEESIRDYIAFPKNTSASSPMDQCPSEVDLQQLQDIHISV-QMPK 592

Query: 597 KILK 600
              K
Sbjct: 593 GADK 596


>gi|308234074|ref|ZP_07664811.1| aspartyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943897|ref|ZP_08241362.1| aspartate--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491866|gb|EGF23640.1| aspartate--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 593

 Score =  584 bits (1506), Expect = e-164,   Method: Composition-based stats.
 Identities = 232/601 (38%), Positives = 331/601 (55%), Gaps = 15/601 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSA 57
           MH   TH+CG+L   DVGS V L+GWV   R  GG+IF+D+RD  G TQ+  +P   D  
Sbjct: 5   MH---THTCGELRAHDVGSTVTLTGWVWHRRNLGGLIFIDLRDRSGYTQIACDPNFKDGV 61

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F  A+ +R EW + + G V  R     N ++ TG++E+    IE+L+ ++  P  +  +
Sbjct: 62  AFNTAQDIRPEWPVLVSGTVRLRPEGQANTSMPTGEVEVLVDTIEVLNTSQTPPFQIEDK 121

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +  E +   YR+LD+RR  +  N+  R+   +++R      +FIE  TP L  S+PEGA
Sbjct: 122 IDLSEDMSLTYRYLDIRRPRVLNNLKLRSNFAHALRQAFHEHDFIEVETPALFKSTPEGA 181

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RDFLVPSRV  G FYALPQ+PQ  K+LLM  G +RY+QI  CFRDED R+DR P EF Q+
Sbjct: 182 RDFLVPSRVRAGHFYALPQSPQLLKELLMVGGVERYYQIVKCFRDEDFRADRQP-EFTQV 240

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV Q++IL+  E +L   F +         +  R+ Y DA+  YG DKPD R  +
Sbjct: 241 DVEMSFVTQENILDMAEAILSKAFTQVG--VKFPQHLERMQYWDAMDTYGCDKPDTRFGM 298

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            MHNVT+   HS F+VFS+                G  G R+  D++ + A+  G  GL 
Sbjct: 299 KMHNVTKLVEHSAFKVFSQAAQHGQRVVGMCAKTAGNWG-RSRIDKLADVAKKNGAAGLV 357

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +I    D     +   P+AK L      A+   ++ Q GD   FI    L         R
Sbjct: 358 WIALHDDG----SIKSPIAKFLQEDEIHALCAEMEAQPGDLLLFIVDKRLVADQAMGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            H+A EL I  C    F W+++FP + W+ E       H PFT+P+         D LS+
Sbjct: 414 LHLADELSIKRCG-HSFLWVVNFPLFHWDPERNAYASEHQPFTLPRAEDMDKLSVDPLSV 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            ++ YD V +G+E   GG+R H +E+ ++    +G ++     +FG L  A   G PP G
Sbjct: 473 GSYTYDFVMDGYEAGGGGMRIHDAELQMRILKMLGFTEARARAQFGFLLDALTFGAPPMG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G A G+DRI MLL GA ++R+V  FP S +  DL+  +PS VS +QL +L LR+VE+ K+
Sbjct: 533 GFALGLDRICMLLAGADSIRDVIAFPKSTSASDLMSAAPSVVSAQQLSDLHLRVVEDDKQ 592

Query: 598 I 598
           I
Sbjct: 593 I 593


>gi|317014037|gb|ADU81473.1| aspartyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 579

 Score =  584 bits (1505), Expect = e-164,   Method: Composition-based stats.
 Identities = 223/592 (37%), Positives = 339/592 (57%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKIIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR E+VL   G    R A   N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRGEFVLVAKGKARLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKHVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+     +T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQAIFKAIG--HTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNSIFSNIAKDPKDKRIKALNVKGADALFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  R D Q GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W++ FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVHFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ + 
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTNAPSPINEEQLRELHIRLRKP 578


>gi|116513951|ref|YP_812857.1| aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|313123581|ref|YP_004033840.1| aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|116093266|gb|ABJ58419.1| aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|312280144|gb|ADQ60863.1| Aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|325125612|gb|ADY84942.1| Aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 614

 Score =  584 bits (1505), Expect = e-164,   Method: Composition-based stats.
 Identities = 218/602 (36%), Positives = 341/602 (56%), Gaps = 12/602 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           M + RT  CG++    +   V L GWV RVR  G +IF+D+RD  GI QVV N DS    
Sbjct: 4   MEK-RTDYCGNITSQYLDQDVLLYGWVQRVRNLGQLIFIDLRDREGIVQVVVNHDSGQEL 62

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            ++A S+  E+V+ + G V  RS++  N ++ TG +E+ A +I +L+ A+  P  +  + 
Sbjct: 63  MDVASSLGQEYVVEVKGHVNERSSK--NPDMKTGDVEVIASEITVLNKAKTPPFEIKDDL 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR TL   ++ R +I+ +    +  E FI   TP L  S+PEGAR
Sbjct: 121 VASEQTRLKYRYLDLRRPTLQNALIMRAQIMTATNAYLSGEGFINIETPDLGKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA CFRDED R DR P EF Q+D
Sbjct: 181 DYLVPSRVYPGSFYALPQSPQIFKQLLMGAGFDKYYQIARCFRDEDLRGDRQP-EFTQID 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF++++ +    E +L  V ++    + +     RI + +++ +YG DKPD R  ++
Sbjct: 240 LETSFMDEEGVQEVTEGLLAKVMKDVKGID-LQLPLPRITWQESMDKYGCDKPDTRYEML 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +H++   F  S F+VF+  L         A+       +R   + M ++ +     GLA+
Sbjct: 299 IHDLGNVFAKSGFKVFASALENGGFVRGIAVKGGAKFYSRKKIEAMQDYIKRYHAKGLAW 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           + +   E G+ +  GPV++ L+      +     ++ G+   FIA      C      R 
Sbjct: 359 VKY---EDGDFS--GPVSRFLSEEEKAGLVQEFSLEGGELLLFIADQWKVCCDSLDYLRR 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
             A+E GII  + +++ W++D+P +E++E +++   AH+PFTMP      L   D     
Sbjct: 414 QTAKETGIIPKDTYKYLWVVDWPLFEYDEGDERWIAAHHPFTMPDDKGIELLETDPHKAH 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G IR H  ++  + F  +G +KE    +FG L  A   G PPH G
Sbjct: 474 ARSYDIVLNGYELGGGSIRIHKRDIQEKMFKALGFTKERAYEQFGFLMDALDMGFPPHAG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +A G+DR  MLL G  N+R+V  FP + +  + +M +P+ V+ +QL +LG+ + E  K+ 
Sbjct: 534 LAIGLDRFAMLLAGKDNIRDVIAFPKNASASEPMMHAPAPVADQQLTDLGIEVAEAAKEG 593

Query: 599 LK 600
           ++
Sbjct: 594 VE 595


>gi|208434537|ref|YP_002266203.1| aspartyl-tRNA synthetase [Helicobacter pylori G27]
 gi|238064669|sp|B5Z6Y8|SYD_HELPG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|208432466|gb|ACI27337.1| aspartyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 577

 Score =  584 bits (1505), Expect = e-164,   Method: Composition-based stats.
 Identities = 220/591 (37%), Positives = 338/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKSVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+     +T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQAIFKAIG--HTISKPFKRMPYKEAMENYGSDKPDLRFKLPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSHSIRDVIAFPKTQKASCLLTNAPSPINEEQLRELHIRLRK 577


>gi|238852665|ref|ZP_04643075.1| aspartate--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834811|gb|EEQ27038.1| aspartate--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 617

 Score =  584 bits (1505), Expect = e-164,   Method: Composition-based stats.
 Identities = 218/602 (36%), Positives = 347/602 (57%), Gaps = 12/602 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           M + RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N DS    
Sbjct: 4   MEK-RTDYAGNITSKYEGQEVNLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGKEL 62

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            +IA S+ +E V+ + G V+ RS  ++N ++ TG++E+ A +I++L+ ++  P  +  + 
Sbjct: 63  MDIADSLNNEDVIEVKGKVVKRS--SVNPDMKTGEVEVDATEIDVLNKSKVPPFEIKDDI 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR TL K I+ R++I+ +         FI+  TPIL  SSPEGAR
Sbjct: 121 NAAEQTRLKYRYLDLRRPTLQKAIMLRSKILKATHEYFDENGFIDIETPILGKSSPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+D
Sbjct: 181 DYLVPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQID 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME SF ++  + +  E +L+ + ++    + +     RI +D+A+ +YG+DKPD R  + 
Sbjct: 240 METSFTDEKQVQDYTEGLLKKIMKDVMGID-LKTPIKRITWDEAMNKYGSDKPDTRYEMF 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +H+++  F  S+F+VFS  ++     +  A+       +R   +   ++ +     GLA+
Sbjct: 299 IHDLSPIFKDSDFKVFSGAIADGGYVKGIAVKNGAKQYSRKKIEEKQDYIKRYHAKGLAW 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           + +   E G  +  GPV++ L   N EA++   D++ G+   F+A             R 
Sbjct: 359 VKY---EDGEFS--GPVSRFLTDENKEALKKEFDLEGGELVVFVADKWKVVTDSLDHLRR 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
             A+E GII  N ++F W++D+P +E++E   +   AH+PFTMP      L   D     
Sbjct: 414 EFAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAH 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G
Sbjct: 474 ARSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLLDALDMGFPPHAG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +A G+DR  M+L    N+R+V+ FP + +  + +M +P+ V+ +QL ++G+++ +  +  
Sbjct: 534 LAIGLDRFAMMLAQKDNIRDVTAFPKNASASEPMMHAPAPVADQQLDDIGIKVEDKYEDS 593

Query: 599 LK 600
           +K
Sbjct: 594 VK 595


>gi|167751119|ref|ZP_02423246.1| hypothetical protein EUBSIR_02104 [Eubacterium siraeum DSM 15702]
 gi|167655834|gb|EDR99963.1| hypothetical protein EUBSIR_02104 [Eubacterium siraeum DSM 15702]
 gi|291531791|emb|CBK97376.1| aspartyl-tRNA synthetase [Eubacterium siraeum 70/3]
 gi|291556675|emb|CBL33792.1| aspartyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 589

 Score =  583 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 267/596 (44%), Positives = 379/596 (63%), Gaps = 15/596 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           ++YRTH+C  L  +D+G  VR++GWV  +R HGGI F+D+RDHYG  Q+    +    E 
Sbjct: 5   NKYRTHTCEMLSENDIGKTVRVAGWVENIRDHGGIKFIDLRDHYGYVQITFQKNEGLLE- 63

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF--GERE 119
              V  E  + I G V+ R+  T N  I TG IE+ A+ +E+L       LP       E
Sbjct: 64  --GVNKECAVTIGGTVIKRAEGTYNDKISTGTIEIVAESLEVLGKVTVEQLPFEVPTSTE 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR KYR+LDLR   +H NIV R+++I+ +R +M    F+E  TPIL+ SSPEGARD
Sbjct: 122 TKEDIRLKYRYLDLRNKRMHNNIVLRSQVISFLRSKMTEMGFLEIQTPILSTSSPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +L+PSR + G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD 
Sbjct: 182 YLIPSRKHHGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDF 241

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+F  Q+D+    E VL  VFE+F         F RI Y +++ +YGTDKPDLRNP+I+
Sbjct: 242 EMAFATQEDVFANAEEVLSAVFEKFGGKPVSPAPFKRIPYAESMLKYGTDKPDLRNPLII 301

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +++ FV S+F+ F+     N       +P      ++ F ++M  +A+  G  GL Y+
Sbjct: 302 TELSDLFVDSDFKPFA-----NKCVRGIRVP-GMASQSKGFFEKMEAFAKEIGMKGLGYV 355

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                   +   +GP+ K LN    E ++ R  ++ GD  +FIA +      FA   R  
Sbjct: 356 KV----DESFKYLGPIDKFLNDEQREELKNRCALEVGDVLYFIADNKKMAPKFAGQIRTE 411

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ + +I+ + +E C+I+DFP YE +EE  K  F HNPF+MPQGG+E+LK  + L I A
Sbjct: 412 VAKRMDMIDYDRYEMCFIVDFPMYEEDEETGKTIFTHNPFSMPQGGLEALKTKNPLDILA 471

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG +RNH  E+M++AF   G +++ V  +FG LY AFQ G PPH G+
Sbjct: 472 YQYDIVCNGVELSSGAVRNHDLEIMIKAFEIAGYTEQDVAEKFGALYNAFQYGAPPHAGM 531

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR++MLL G +++REV  FPM+ N  DLL+G+P+ V+ +QLRE+ +++ + P
Sbjct: 532 APGVDRMIMLLTGDESIREVIAFPMNSNAQDLLLGAPTEVTEQQLREVHIKVRQKP 587


>gi|160903057|ref|YP_001568638.1| aspartyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160360701|gb|ABX32315.1| aspartyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 599

 Score =  583 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 240/608 (39%), Positives = 362/608 (59%), Gaps = 12/608 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSAC 58
           M + RTH+CG+L  +D+   V L+GW+ R+R  GGIIF+ IRD YG TQ V +   +   
Sbjct: 1   MFQKRTHTCGELNENDIDKIVILNGWIDRIRDLGGIIFVLIRDRYGKTQAVFDSSDNYTL 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           ++ A  +++E+V+ I G V  R  +  N N++TG IE+ A  +EILS +E  P+ V  E 
Sbjct: 61  YQKALKLKNEYVVSIQGKVRVRPEKDKNPNMVTGNIEILATNLEILSESETPPIYVNIEE 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E++R KYR+LDLR++ + +N++ R +++   R  + AE F+E  TP LT S+PEGAR
Sbjct: 121 DISENLRLKYRYLDLRKERMQRNLILRHKVMKITRDTLSAEGFLEIETPYLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR+  G+FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D
Sbjct: 181 DFLVPSRLKPGNFYALPQSPQLFKQLLMVSGFDKYFQIARCFRDEDFRADRQP-EFTQID 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SFVE++DI    E +++ +FE+  N N +   F +  YD+ I++YG+DKPD+R  + 
Sbjct: 240 IEQSFVEKEDIFALTEKLIKEIFEKSLNYNGLEIPFQKYTYDEVIQKYGSDKPDIRYGME 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
             ++T +F ++E       +      + + +P +    +R   D + E+A+ QG  GL +
Sbjct: 300 FIDLTAYFQNTEANFIKNGIDKGLILKGFIVPDRSNNFSRKKFDDLTEFAKEQGSSGLIW 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I    +   N+       K         +  R  M++GD  F I  +  K        R 
Sbjct: 360 IACDKEMRSNI-------KKAAAKEINILVERGIMKEGDVLFAILEETDKIDQILGQLRI 412

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSI 477
            + +E      + F   W+ DFP + WNEEE++I   H+PFTMP    +   +  D L I
Sbjct: 413 KMIKE-EFEKKSGFSIIWVTDFPMFSWNEEEQRIVAEHHPFTMPNLDDLAKYENKDPLKI 471

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K+  YDLV NG+EIASG IR H  +V  + F  +G+SKE  + +FG L  AF+ G PPHG
Sbjct: 472 KSQSYDLVINGYEIASGSIRIHKQDVQEKVFDILGLSKEEAQEKFGFLLEAFKYGAPPHG 531

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           GIA G+DR+V +L+G ++++EV  FP + +  D +  +PS VS +QL EL L + +  + 
Sbjct: 532 GIAIGMDRLVSILVGEESIKEVIAFPKTASGTDPMTNAPSEVSEKQLEELHLALKKINES 591

Query: 598 ILKISVTT 605
             +    +
Sbjct: 592 EKQNDSKS 599


>gi|317496044|ref|ZP_07954404.1| aspartyl-tRNA synthetase [Gemella moribillum M424]
 gi|316913619|gb|EFV35105.1| aspartyl-tRNA synthetase [Gemella moribillum M424]
          Length = 590

 Score =  583 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 222/597 (37%), Positives = 342/597 (57%), Gaps = 10/597 (1%)

Query: 1   MHRY-RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSA 57
           M  Y RT   G +    VG  V + GWV + R  G +IF+D+RD  G+ Q V     ++ 
Sbjct: 1   MSAYGRTEYAGRIDEKYVGKKVVVKGWVSKRRDLGNLIFIDVRDRMGVVQCVFSGEKNNE 60

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+A ++R+E+V+ I+G V+ R+  T+N  I TG++E+ A K+EILS A+ LP  +   
Sbjct: 61  LHELASTLRNEFVISIEGEVVLRNENTVNDKIATGKVEIIADKLEILSKAKTLPFVLDDA 120

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R KYR+LDLRR  L + +  R++I  + R  +    F++  TPILT S+PEGA
Sbjct: 121 SLSSEELRLKYRYLDLRRTELAEVLHLRSKITKATRDYLDNNMFVDVETPILTKSTPEGA 180

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV+ G FYALPQ+PQ +KQLLM +GFDRY+Q+A CFRDED R+DR P +F Q+
Sbjct: 181 RDYLVPSRVHPGEFYALPQSPQLFKQLLMVAGFDRYYQVARCFRDEDLRADRQP-DFTQI 239

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF+ Q++IL  +E ++  V +E    + V   F R+ Y++A+ R+G+DKPD R  +
Sbjct: 240 DMEMSFMSQEEILTMIEGLIAHVMKEVKGID-VVTPFPRLDYEEAMERFGSDKPDTRFGM 298

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + +V++   + +F+VFS  +      +           +R   D + ++  + G  GLA
Sbjct: 299 ELKDVSDLVKNLDFKVFSNAVEQGGAVKCIVAKGCAEQYSRKDIDALGKYVANYGAKGLA 358

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++             G +AK       + + VR+D + GD   F A       +     R
Sbjct: 359 WVKVT-----EEGLNGAIAKFFTDEVAQELVVRVDAEVGDIILFAADSKKVCYASLGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A +L +I+ + + + W++++P  E++EE  K   AH+PFTMP+     L        
Sbjct: 414 QKLAADLDLIDKDKYNYLWVVNWPLLEYDEERGKYSAAHHPFTMPKIEDVELLETAPEKA 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YD+V NG+E+  G IR +  +V    F  +G S+E  +++FG L  AF+ G+PPHG
Sbjct: 474 YAQAYDIVLNGYELGGGSIRIYDKDVQSSMFKALGFSEEEAKSQFGFLLDAFEYGVPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G A G+DR VMLL G  N+R+   FP +    D +  +PS V +EQL EL + ++  
Sbjct: 534 GCALGLDRFVMLLAGRDNLRDTIAFPKTAAAADPMTQAPSPVDLEQLLELNIALLRK 590


>gi|302326888|gb|ADL26089.1| aspartate--tRNA ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 623

 Score =  583 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 225/604 (37%), Positives = 334/604 (55%), Gaps = 14/604 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FE 60
             RTH+CG L   DVG  V L+GWV R R HGG+IF+D+RD YG TQ+V NPD      +
Sbjct: 27  MKRTHNCGQLRKEDVGQTVTLAGWVDRRRDHGGVIFVDLRDKYGKTQIVFNPDYNADVLK 86

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP---LPVFGE 117
            A+ +R+E+V+ + G V +R     N  + TG+IE+ A K+EIL+ A   P        E
Sbjct: 87  TAEQLRNEYVIYVTGKVYAREEGNTNEKLATGEIEVKADKLEILNAALTSPLAINDPNEE 146

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +  + +R +YR+LDLRR  + K ++ ++R + ++     +  F    TP L  S+PEGA
Sbjct: 147 CKENDDLRLQYRYLDLRRPWIQKKLLLKSRFLKAVYDFFYSNGFENIETPCLCKSTPEGA 206

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRVN G FYALPQ+PQQYKQLLM +G DRYFQIA CFRDED R+DR P EF Q+
Sbjct: 207 RDYLVPSRVNPGKFYALPQSPQQYKQLLMIAGMDRYFQIAKCFRDEDLRADRQP-EFTQI 265

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV QD+++   +  +  V  +  N      +  R+ + +A+ +YG+DKPDLR  +
Sbjct: 266 DVEMSFVNQDEVMEMFDKFVTEVLGKVWNFE-PPRHIRRMKWAEAMLKYGSDKPDLRFDL 324

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            +H+V+E    S F VF   ++        A         R   D +  +    G  GL 
Sbjct: 325 EIHDVSEIGAKSNFGVFKNCVAAGGKIRGIAAKGCVD-FTRKQIDELTAYVAKYGSKGLV 383

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++  + ++         V K         +R  +  + GD  FFIAG      +     R
Sbjct: 384 WMRVKENDEVETQ----VGKFFTTEQLNELRDAVGAKCGDMMFFIAGPEKIAATAMGQLR 439

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLS 476
             +A+  G+ +    EF WI +FP +E+++ E +    H+PFT P      +  G +L  
Sbjct: 440 LEVARIKGLRDPKKREFVWITEFPMFEYSDTEGRYMAMHHPFTNPLPEHLDMMLGGNLKD 499

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YDLV NG EI  G IR H  EV  + F  +G+S+E V+ +FG    AF+ G PPH
Sbjct: 500 CNAEAYDLVLNGVEIGGGSIRIHNPEVQEKVFRLLGLSEEQVKTKFGFFVDAFKYGAPPH 559

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+V  + G +++R+   FP + +    +   PS V ++QL+++ + + + PK
Sbjct: 560 GGLAFGLDRVVATMEGEESIRDYIAFPKNTSASSPMDQCPSEVDLQQLQDIHISV-QMPK 618

Query: 597 KILK 600
              K
Sbjct: 619 GADK 622


>gi|256851203|ref|ZP_05556592.1| aspartyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260660627|ref|ZP_05861542.1| aspartyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282934670|ref|ZP_06339913.1| aspartate--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297206069|ref|ZP_06923464.1| aspartate--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|256616265|gb|EEU21453.1| aspartyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548349|gb|EEX24324.1| aspartyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281301245|gb|EFA93546.1| aspartate--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297149195|gb|EFH29493.1| aspartate--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 610

 Score =  583 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 219/615 (35%), Positives = 346/615 (56%), Gaps = 18/615 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
            RT  CG++    +   V L GWV RVR  G +IF+D+RD  GI QVV N DS     + 
Sbjct: 3   KRTDYCGNITSQYLDQEVTLYGWVQRVRNLGNLIFIDLRDREGIVQVVVNHDSGKDLMDK 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+ +E+V+ + G V+ RS  ++N  + TG++E+ A  I IL+ A+  P  +  +    
Sbjct: 63  ADSLGNEYVIEVKGKVVKRS--SVNPEMKTGEVEVDATTITILNEAKNPPFEIKDDLSAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  + K R+LDLRR TL + ++ R++I  ++     +E FI+  TP L  S+PEGARD+L
Sbjct: 121 EQTKLKCRYLDLRRSTLQRALITRSKITTAVHEFFDSEGFIDIETPDLGKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA CFRDED R DR P EF Q+DME 
Sbjct: 181 VPSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCFRDEDLRGDRQP-EFTQIDMET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+++  + +  E +L+ V  +    +       RI ++DA+  YG+DKPD+R  + + +
Sbjct: 240 SFLDEKGVQDITERLLQKVMHDVKGVDI-KLPLPRITWNDAMNYYGSDKPDMRFDMKIQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           + E F  S+F+VFS  ++     +  A+       +R   +   E+ +     GLA+  +
Sbjct: 299 LNEVFKDSDFKVFSGAIADGGFVKAIAVEGGAKAYSRKKIEEKQEYIKRFHAKGLAWAKF 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E G  +  GPV++ +     E ++   +++ G+   F+A      C      R  IA
Sbjct: 359 ---EDGEFS--GPVSRFITDNEAEQLKKIYNLKGGELLLFVADKWKVCCDALGYLRRSIA 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            EL +++ + + F W++D+P +E++E + +   AH+PFTMP      L   +     A  
Sbjct: 414 IELNMVSKDDYHFEWVVDWPLFEYDEGDDQWIAAHHPFTMPDDEGIKLLETEPHKAHARS 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD++ NG+E+  G IR H  ++ L+    +G +KE    +FG L  A   G PPH G+A 
Sbjct: 474 YDIILNGYELGGGSIRIHKKDIQLKMLKALGFTKEKAYEQFGFLLDALDMGFPPHAGLAI 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV-------EN 594
           G+DR  MLL G  N+R+V  FP + +  + +M +PS VS EQ+ ELG+ +        ++
Sbjct: 534 GLDRFAMLLTGKDNIRDVIAFPKTASASEPMMKAPSPVSDEQMAELGIEVTASARSVRDD 593

Query: 595 PKKILKISVTTILRN 609
            +K L+      +++
Sbjct: 594 NQKELEKEAEADIKD 608


>gi|282852107|ref|ZP_06261465.1| aspartate--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282556867|gb|EFB62471.1| aspartate--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 617

 Score =  583 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 217/598 (36%), Positives = 345/598 (57%), Gaps = 11/598 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT   G++     G  V L GWV RVR  G ++F+D+RD  GI QVV N DS     +IA
Sbjct: 7   RTDYAGNITSEYEGQEVNLYGWVQRVRNLGNLVFIDLRDREGIVQVVVNKDSGKELMDIA 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +E V+ + G V+ RS  ++N ++ TG++E+ A +I++L+ ++  P  +  +    E
Sbjct: 67  DSLNNEDVIEVKGKVVKRS--SVNPDMKTGEVEVDATEIDVLNKSKVPPFEIKDDINAAE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR TL K I+ R++I+ +         FI+  TPIL  SSPEGARD+LV
Sbjct: 125 QTRLKYRYLDLRRPTLQKAIMLRSKILKATHEYFDENGFIDIETPILGKSSPEGARDYLV 184

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q+DME S
Sbjct: 185 PSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQIDMETS 243

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F ++  + +  E +L+ + ++    + +     RI +D+A+ +YG+DKPD R  + +H++
Sbjct: 244 FTDEKQVQDYTEGLLKKIMKDVMGID-LKTPIKRITWDEAMNKYGSDKPDTRYEMFIHDL 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +  F  S+F+VFS  ++     +  A+       +R   +   ++ +     GLA++ + 
Sbjct: 303 SPIFKDSDFKVFSGAIADGGYVKGIAVKNGAKQYSRKKIEEKQDYIKRYHAKGLAWVKY- 361

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G  +  GPV++ L   N EA++   D++ G+   F+A             R   A+
Sbjct: 362 --EDGEFS--GPVSRFLTDENKEALKKEFDLEGGELVVFVADKWKVVTDSLDHLRREFAK 417

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E GII  N ++F W++D+P +E++E   +   AH+PFTMP      L   D     A  Y
Sbjct: 418 ETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDPHKAHARSY 477

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H   +  + F  +G +K+    +FG L  A   G PPH G+A G
Sbjct: 478 DIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAYEQFGYLLDALDMGFPPHAGLAIG 537

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           +DR  M+L    N+R+V+ FP + +  + +M +P+ V+ +QL ++G+++ +  +  +K
Sbjct: 538 LDRFAMMLAQKDNIRDVTAFPKNASASEPMMHAPAPVADQQLDDIGIKVEDKYEDSVK 595


>gi|91217020|ref|ZP_01253983.1| aspartyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91184891|gb|EAS71271.1| aspartyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 582

 Score =  583 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 223/593 (37%), Positives = 343/593 (57%), Gaps = 19/593 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
            YR H+  +L +  +   V LSGWV ++R  G II++D+RD YG+TQ+V + D       
Sbjct: 1   MYRDHNNSELNIESLNKKVTLSGWVQKIRDKGFIIWVDLRDRYGLTQLVFDSDRTPKDIM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E AKS+  E+V+  +G V+ R ++  N +I TG IE+  +K+ IL+++E  P  +  E +
Sbjct: 61  EKAKSLGREFVIQAEGTVIERISK--NKSITTGDIEVLVEKLTILNISETPPFTIEDETD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LD+RR+ +   ++ R+++  ++R  +  + FIE  TP L  S+PEGARD
Sbjct: 119 GGEDLRMRYRYLDIRRNPVKNKLIFRSKVSMAVRNYLTQKEFIEVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNAGQFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DILNT E + + + +E +        F RI YD+A++ YG DKPD+R  +  
Sbjct: 238 EMTFVEQEDILNTFEGLTKYLLKEINGVEVKD--FPRITYDEAMQTYGNDKPDIRFGMKF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             +     H +F+VF++           AIP      +R   D++ EW +    G  G+ 
Sbjct: 296 GELNAIAQHKDFKVFNEA----ELVVGIAIP-GAASYSRKDIDKLIEWMKRPQVGAKGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+  + +E G++     V K  +  + +A   +   Q GD    ++G         +  R
Sbjct: 351 YV--KCNEDGSLK--SSVDKFYDESDLKAWVEKTGAQPGDLICILSGKANATRGQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +   LG+     F   W++DFP  EW+E  ++    H+PFT P+ G   L   D  ++
Sbjct: 407 MEMGNRLGLRKPKEFAPLWVVDFPLLEWDEATQRFHAMHHPFTSPKEGQLELLATDPGAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA  YDLV NG EI  G IR H  +     F  +G +KE  E +FG L +AF  G PPHG
Sbjct: 467 KANAYDLVLNGNEIGGGSIRIHDQKTQSMMFDYLGFTKEEAEAQFGFLMKAFTYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           GIA G+DR+V +L G +++R+   FP + +  D+++ +P+ +S +QL+EL ++
Sbjct: 527 GIAFGLDRLVAILGGQESIRDYIAFPKNNSGRDIMIDAPAELSADQLKELHIK 579


>gi|157414294|ref|YP_001485160.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|166979992|sp|A8G7J3|SYD_PROM2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157388869|gb|ABV51574.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 598

 Score =  583 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 219/599 (36%), Positives = 343/599 (57%), Gaps = 16/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R   C +L  +D+G  V L GWV R R HGG+IF+D+RDH G  Q+  NPD     F+ A
Sbjct: 2   RNKICKELNNTDIGKLVNLCGWVDRRRDHGGVIFIDLRDHSGFLQITINPDDGADLFKQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           +++R+E V+ + G++  R  ++IN N+ TG++EL  + +++L+  +     P+ +     
Sbjct: 62  ETLRNETVIMVSGIINERPKDSINTNLSTGELELKVKDLQVLNQIKNNLPFPVSIHDYEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLRR  L +N+  R +II   R  +    F E  TP+LT S+PEGARD
Sbjct: 122 TKEELRLKYRYLDLRRGKLLENLKTRHKIIKVSREFLDNFGFTEVETPLLTKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP+R++ G F+ALPQ+PQ +KQLLM  G D+Y+QIA CFRDED R+DR P EF QLD+
Sbjct: 182 FLVPARLSNGEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV +++I++  E++++ +++E  N N   N F R+ +  A+  YGTD+PD R  +++
Sbjct: 241 EMSFVSEEEIISFNESLIKKIWKEVLNINFN-NAFPRMSWQAAMDNYGTDRPDTRYEMLL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
            ++        F +F+K +      +   +       +         + + A+  G  GL
Sbjct: 300 KDLGGVLGDIGFNIFTKAIKAGGYIKSITVKGGNSSISNVRIKPGGDIFQVAQDAGAGGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  + DE   +  +G +  +L+  +   I    + +DGD     AGD           
Sbjct: 360 AFIRVKGDE---LETIGAIKNNLSEEHIADILKITEAKDGDLILLGAGDKQIVNQSLDRV 416

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG---GMESLKGND 473
           R +IA++L +I+ + + F W+ DFP +E NE+E + +  H+PF  P+            +
Sbjct: 417 RQYIAKDLNLIDKSKWNFLWVTDFPMFERNEDENRYEALHHPFCSPKNIKSKDSDKMQKE 476

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           + +  A  YDLV NG E+  G +R H + +  +    VG++ + ++ +FG L  A + G 
Sbjct: 477 IENSIANAYDLVLNGMELGGGSLRIHEANLQREVLKTVGLTDKEIDEKFGFLIEALEMGA 536

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           PPHGGIA G+DRI MLL+GA ++RE   FP +Q    LL  +PS VS  QL+EL + I 
Sbjct: 537 PPHGGIAFGLDRITMLLIGADSIRETIAFPKNQQAKCLLTNAPSNVSESQLKELDIEIT 595


>gi|300812627|ref|ZP_07093040.1| aspartate--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496408|gb|EFK31517.1| aspartate--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 614

 Score =  583 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 218/602 (36%), Positives = 341/602 (56%), Gaps = 12/602 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           M + RT  CG++    +   V L GWV RVR  G +IF+D+RD  GI QVV N DS    
Sbjct: 4   MEK-RTDYCGNITSQYLDQDVLLYGWVQRVRNLGQLIFIDLRDREGIVQVVVNHDSGQEL 62

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            ++A S+  E+V+ + G V  RS++  N ++ TG +E+ A +I +L+ A+  P  +  + 
Sbjct: 63  MDVASSLGQEYVVEVKGHVNERSSK--NPDMKTGDVEVIASEITVLNKAKTPPFEIKDDL 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E  R KYR+LDLRR TL   ++ R +I+ +    +  E FI   TP L  S+PEGAR
Sbjct: 121 VASEQTRLKYRYLDLRRPTLQNALIMRAQIMTATNAYLSGEGFINIETPDLGKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA CFRDED R DR P EF Q+D
Sbjct: 181 DYLVPSRVYPGSFYALPQSPQIFKQLLMGAGFDKYYQIARCFRDEDLRGDRQP-EFTQID 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF++++ +    E +L  V ++    + +     RI + +++ +YG DKPD R  ++
Sbjct: 240 LETSFMDEEGVQEVTEGLLAKVMKDVKGID-LQLPLPRITWQESMDKYGCDKPDTRYEML 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +H++   F  S F+VF+  L         A+       +R   + M ++ +     GLA+
Sbjct: 299 IHDLGNVFAKSGFKVFASALENGGFVRGIAVKGGAKFYSRKKIEAMQDYIKRYHAKGLAW 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           + +   E G+ +  GPV++ L+      +     ++ G+   FIA      C      R 
Sbjct: 359 VKY---EDGDFS--GPVSRFLSEEEKAGLVQEFSLEGGELLLFIADQWKVCCDSLDYLRR 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
             A+E GII  + +++ W++D+P +E++E +++   AH+PFTMP      L   D     
Sbjct: 414 QTARETGIIPKDTYKYLWVVDWPLFEYDEGDERWIAAHHPFTMPDDKGIELLETDPHKAH 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG+E+  G IR H  ++  + F  +G +KE    +FG L  A   G PPH G
Sbjct: 474 ARSYDIVLNGYELGGGSIRIHKRDIQEKMFKALGFTKERAYEQFGFLMDALDMGFPPHAG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +A G+DR  MLL G  N+R+V  FP + +  + +M +P+ V+ +QL +LG+ + E  K+ 
Sbjct: 534 LAIGLDRFAMLLAGKDNIRDVIAFPKNASASEPMMHAPAPVADQQLTDLGIEVAEAAKEG 593

Query: 599 LK 600
           ++
Sbjct: 594 VE 595


>gi|294507994|ref|YP_003572052.1| Aspartyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294344322|emb|CBH25100.1| Aspartyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 629

 Score =  583 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 243/604 (40%), Positives = 337/604 (55%), Gaps = 15/604 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACF 59
           H  RTH+CGDL   D G  V L GWV   R HGG++F+D+RD YG+TQVV +P  +   +
Sbjct: 15  HPARTHTCGDLRAEDNGEAVVLKGWVDTRRDHGGLVFVDLRDRYGLTQVVFSPQDNQTAY 74

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+A  +R E V+ + G V  R  E +N ++ TG IE+SA  + +L+ +E  P  V    E
Sbjct: 75  EVAGQLRREDVISVQGTVRPRGEEAVNPDLPTGAIEVSADDLAVLNTSETPPFVVSAHEE 134

Query: 120 ----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                 E +R  +R+LDLRR  L +NI  R R+  +      A +F+E  TP+L  S+PE
Sbjct: 135 RQMNTNEDLRLAHRYLDLRRPDLQENIELRHRLYQTTHRYFDAHDFLEVETPVLMKSTPE 194

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARDFLVPSR++ G FYALPQ+PQ YKQLLM  G DRY QI  CFRDED R+DR P EF 
Sbjct: 195 GARDFLVPSRLHPGRFYALPQSPQTYKQLLMVGGLDRYVQIVKCFRDEDLRADRQP-EFT 253

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           Q+D+EM+F  ++ +    E ++  +++   +   +   F R+ YD+A+R YGTDKPDLR 
Sbjct: 254 QIDVEMTFATEEQVYELTEGLMADLWDTLEDTT-LETPFPRMTYDEALRTYGTDKPDLRF 312

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQP 354
            + +H+V++ F  S FRVF  I+          +P +G  G RA  DR+      + G  
Sbjct: 313 DLELHDVSDCFAGSGFRVFDSIVDDGGHIVALRVPGEGDRG-RAAMDRLEAHVTDEIGAA 371

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GL Y     D SG    +   A  L      A   ++  + GD    +AG        A 
Sbjct: 372 GLIYFQLPSDGSGIEQNLSSDA--LPHEYGRAAAEQVGAEAGDLVLTLAGHSPTVFEQAG 429

Query: 415 DARNHIAQELGII---NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
             R H+ +ELG+    +     F W+ DFP  E++EE  +    H+PFT P         
Sbjct: 430 ALRLHMGEELGLRPPADEGDDAFLWVTDFPLMEYDEEAGRPVSMHHPFTAPHPDDLDRLD 489

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D   ++A  YDLV NG EI  G IR H  E  +Q F  +GI +E  ++RFG L  A + 
Sbjct: 490 EDPTQVQARAYDLVLNGNEIGGGSIRIHNHETQMQVFDVLGIDEEEAQDRFGFLLDALRY 549

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR+VMLL GA ++R+V  FP +Q+  + ++ SP  V  EQL  L LR+
Sbjct: 550 GAPPHGGIALGLDRLVMLLAGADSLRDVIAFPKTQSGKEPMVKSPDWVDPEQLETLALRL 609

Query: 592 VENP 595
              P
Sbjct: 610 DLPP 613


>gi|254779393|ref|YP_003057498.1| aspartyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001304|emb|CAX29285.1| Aspartate-tRNA ligase (Aspartic acid translase) (Aspartyl-tRNA
           synthetase) [Helicobacter pylori B38]
          Length = 577

 Score =  583 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 223/591 (37%), Positives = 339/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKIIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G V  R A   N  + TG+IE+  +++ I + +   P    G +   E +
Sbjct: 62  VRSEFVLVAKGRVRLRGAGLENPKLKTGKIEIVLEELVIENKS-TTPPIEIGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++DD+++ +E++L+ +F+     +T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DEDDVMSVVEDLLQEIFKAIG--HTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+    G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAKDPKNKRIKALNVKGADAIFSRSVLKELEEFVCQFGAKGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS +S EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTNAPSPISEEQLRELHIRLRK 577


>gi|294056657|ref|YP_003550315.1| aspartyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293615990|gb|ADE56145.1| aspartyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 595

 Score =  583 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 226/602 (37%), Positives = 352/602 (58%), Gaps = 16/602 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEI 61
             R+H C  L  SD GS V L+GWV  VR HGGI+F+D+RD  G+TQ+V +P +      
Sbjct: 1   MKRSHHCSQLRKSDAGSTVTLAGWVDSVRDHGGILFVDLRDREGLTQIVFDPANKELEAQ 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-Y 120
             S++ E V+ + G V  R AE +N N+ TG IE+ A +++I +V++  P P+    +  
Sbjct: 61  FGSIKPESVIAVSGTVQERIAEAVNPNLATGDIEVHAAELKIHNVSKTPPFPMDDSADKT 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR  YR+LDLRR +    +  R +   ++R  M  E F+E  TP+L  S+PEGAR+F
Sbjct: 121 SEDIRMTYRYLDLRRSSNLNILRLRHKTSQAIRNYMDEEAFVEVETPMLFKSTPEGAREF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G+FYALPQ+PQQYKQ+LM +G +RY+Q+A CFRDED R+DR P EF QLD+E
Sbjct: 181 LVPSRMNPGAFYALPQSPQQYKQMLMVAGVERYYQLARCFRDEDLRADRQP-EFTQLDIE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF++++D+   +E +++ V+++  +   +   FLR+ Y DA+ R+G DKPD+R  + + 
Sbjct: 240 LSFIDREDMYALIEGLMKRVWKDVLDVE-LETPFLRMSYFDAMNRFGVDKPDMRFDMELQ 298

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +    F +S F+VF   L      + +          +     + + A+S G  GLA+I 
Sbjct: 299 DCANIFANSGFKVFKGALDSGGAIKAFNAKGL-ADLTQGELRGLEDAAKSLGAKGLAFIK 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                S N     P+ K  +     A++ +L+++DGD  FF A +  + C+     R   
Sbjct: 358 -----SENGEWKSPILKFFSDEEKAALKEQLNIEDGDIVFFAATEWERACTILGRVRLDA 412

Query: 421 AQEL----GI-INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           AQ L     + I+ + ++F W+++FP    +EE+ +   +H+PFT P      L  +D  
Sbjct: 413 AQLLVKRGKLTIDPSDYKFLWVIEFPLMLMDEEQGRFVASHHPFTAPVEEDIPLLDSDPK 472

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GISKEVVENRFGGLYRAFQCGMP 534
            ++   YDLV NG E+  G IR H  +V  + F +V  I  +VVE+RFG + +AF+ G P
Sbjct: 473 KVRGQHYDLVLNGVELGGGSIRIHQPDVQKKVFEDVLKIEPDVVESRFGYMLKAFEYGAP 532

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR+V +L    ++R+V  FP +Q   +++  SP   + +QLR+L ++ V  
Sbjct: 533 PHGGIAFGLDRMVTILAQRTSIRDVIAFPKNQKGQEMMTASPGIATDKQLRDLHVKAVLP 592

Query: 595 PK 596
            K
Sbjct: 593 KK 594


>gi|229824083|ref|ZP_04450152.1| hypothetical protein GCWU000282_01387 [Catonella morbi ATCC 51271]
 gi|229786437|gb|EEP22551.1| hypothetical protein GCWU000282_01387 [Catonella morbi ATCC 51271]
          Length = 588

 Score =  583 bits (1503), Expect = e-164,   Method: Composition-based stats.
 Identities = 213/587 (36%), Positives = 321/587 (54%), Gaps = 11/587 (1%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSV 65
            CG +G   VG  + L GW+ + R  GG+IF+D+RD  G  QVV N D        A+ +
Sbjct: 7   YCGQVGQEQVGQTITLKGWIQKRRDLGGLIFIDLRDREGFCQVVLNGDHLGDAMAEAERI 66

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           RSE+VL + G +  R  +  NA I TG  EL A+K+ IL+ ++  P+ +  E E  + +R
Sbjct: 67  RSEYVLEVTGTLQYRDEKQRNAKIPTGDFELMAEKLTILATSKTPPIYLDDEAEIQDDLR 126

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            ++RFLDLRR  +  N+  R ++ +++R  +    FI+  TP LT S+PEGARD+LV +R
Sbjct: 127 MRHRFLDLRRPRMQANLRLRHQVTSAIRRYLDDLGFIDVETPYLTKSTPEGARDYLVATR 186

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E SF+ 
Sbjct: 187 -EAGKFFALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQIDLETSFLN 244

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           Q DI   +E +L+ V +     +     F  + Y  A+  YG DKPD+R  + + ++++ 
Sbjct: 245 QADIQEIVEQMLKEVVKATRGLDMTEA-FPSMTYAHAMAHYGVDKPDIRFDMTLKDLSDF 303

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
             + +F VF+  +      +   +  +     R   D + E  +  G  GLA++      
Sbjct: 304 AANCQFSVFANTVKEGGQVKAINLKGQADAYTRKTADALVEVVKPYGAKGLAWLKVT--- 360

Query: 366 SGNVAGMGPVAKHLNI-VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
                  GP+AK      +T+AI      + GD  FF+A  P    +   + R ++A+  
Sbjct: 361 --EEGLNGPIAKFFAEPADTQAILDLTQGEPGDILFFVADKPQVVAAALGELRVNLAKAH 418

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            + + +   F WI D+P +E++EE  +   AH+PFT PQ         +     A  YD+
Sbjct: 419 QLFDEDALAFVWITDWPLFEYDEEAGRYFAAHHPFTSPQNLDLEALKANPDQALAQAYDI 478

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG+EI  G IR H   +  Q F  +G + E  +++FG L  A   G PPHGG+A G+D
Sbjct: 479 VLNGYEIGGGSIRIHTRPMQEQMFDLLGFTPEEAQSQFGFLLDALDYGFPPHGGLALGLD 538

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           R+VMLL    N+REV  FP +    D  + +PS V+  QL+EL L++
Sbjct: 539 RLVMLLAKEPNIREVIAFPKNGRGVDTFIQAPSHVASAQLQELHLQV 585


>gi|254525854|ref|ZP_05137906.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537278|gb|EEE39731.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 598

 Score =  583 bits (1503), Expect = e-164,   Method: Composition-based stats.
 Identities = 219/599 (36%), Positives = 344/599 (57%), Gaps = 16/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R   C +L  +D+G  V L GWV R R HGG+IF+D+RDH G  Q+  NPD     F+ A
Sbjct: 2   RNKICKELNNTDIGKLVNLCGWVDRRRDHGGVIFIDLRDHSGFLQITINPDDGADLFKQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           +++R+E V+ + G++  R  ++IN N+ TG++EL  + +++L+  +     P+ +     
Sbjct: 62  ETLRNETVIMVSGIINERPKDSINTNLSTGELELKVKDLQVLNQIKNNLPFPVSIHDYEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLRR  L +N+  R +II   R  +    F E  TP+LT S+PEGARD
Sbjct: 122 TKEELRLKYRYLDLRRGKLLENLKTRHKIIKVAREFLDNFGFTEVETPLLTKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP+R++ G F+ALPQ+PQ +KQLLM  G D+Y+QIA CFRDED R+DR P EF QLD+
Sbjct: 182 FLVPARLSNGEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV +++I++  E++++ +++E  N N   N F R+ +  A+  YGTD+PD R  +++
Sbjct: 241 EMSFVSEEEIISFNESLIKKIWKEVLNINFN-NAFPRMSWQAAMDNYGTDRPDTRYQMLL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
            ++        F +F+K +      +   +       +         + + A++ G  GL
Sbjct: 300 KDLGGVLGDIGFNIFTKAIKSGGYIKSITVKGGNSSISNVRIKPGGDIFQVAQNAGAGGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  + DE   +  +G +  +L+  +   I    + +DGD     AGD           
Sbjct: 360 AFIRVKGDE---LETIGAIKNNLSEEHIADILKITEAKDGDLILLGAGDKQIVNQSLDRV 416

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME---SLKGND 473
           R +IA++L +I+ + + F W+ DFP +E NE+E + +  H+PF  P+            +
Sbjct: 417 RQYIAKDLNLIDKSKWNFLWVTDFPMFERNEDENRYEALHHPFCSPKNIKSKGSDKMQKE 476

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           + +  A  YDLV NG E+  G +R H + +  +    VG++ + ++ +FG L  A + G 
Sbjct: 477 IENSIANAYDLVLNGMELGGGSLRIHEANLQKEVLKTVGLTDKEIDEKFGFLIEALEMGA 536

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           PPHGGIA G+DRI MLL+GA ++RE   FP +Q    LL  +PS VS  QL+EL + I 
Sbjct: 537 PPHGGIAFGLDRITMLLIGADSIRETIAFPKNQQAKCLLTNAPSNVSESQLKELDIEIT 595


>gi|109947388|ref|YP_664616.1| aspartyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|122973325|sp|Q17XK9|SYD_HELAH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|109714609|emb|CAJ99617.1| aspS [Helicobacter acinonychis str. Sheeba]
          Length = 584

 Score =  583 bits (1502), Expect = e-164,   Method: Composition-based stats.
 Identities = 220/591 (37%), Positives = 338/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   D+   V+++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEVSEKDIDKIVKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++LR +F+     +T+   F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLREIFKAIG--HTIPTPFKRMPYKEAMENYGSDKPDLRFELPLVEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I   +    + A+  KG     +R+    + E+    G  GLAY+  +
Sbjct: 298 CFMDSSNSIFSNIAKDSKNKRIKALNVKGADATFSRSVLKELEEFVHQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                     GP+ K L+    + I  R + Q GD  FF AGD      +    R  +A+
Sbjct: 358 -----EYEIKGPLVKFLSEKGLKNILERTNAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ N + F W+++FP +E  E       AH+PFTMP+             I+A+ Y
Sbjct: 413 MLDLIDKNAWNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAYAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I ++  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFERINIHEDEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS +S EQLREL +R+ +
Sbjct: 527 FDRLIMLMTQSNSIRDVIAFPKTQKASCLLTNAPSPISEEQLRELHIRLRK 577


>gi|317180387|dbj|BAJ58173.1| aspartyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 577

 Score =  583 bits (1502), Expect = e-164,   Method: Composition-based stats.
 Identities = 221/591 (37%), Positives = 339/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++DD++  +E++L+ +F+     +T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DEDDVMGVVEDLLQEIFKAIG--HTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|305433173|ref|ZP_07402329.1| aspartate--tRNA ligase [Campylobacter coli JV20]
 gi|304443874|gb|EFM36531.1| aspartate--tRNA ligase [Campylobacter coli JV20]
          Length = 583

 Score =  583 bits (1502), Expect = e-164,   Method: Composition-based stats.
 Identities = 238/596 (39%), Positives = 344/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H   DL  + +G  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+      EIA
Sbjct: 2   RSHYNTDLNSTHIGEVVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              R+E+VL  +G +  R     N  + TG+IE+   K+ I + +  +P    G+    E
Sbjct: 62  SRTRNEFVLIAEGKIRPRGEGLTNPKLKTGEIEVVVSKLIIENES-AVPPFGIGDESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++ T E  L+ +F+       +   F ++ Y +A+  YG+DKPDLR  + + +V
Sbjct: 240 FCEQKDVIATAETFLKDIFKACGKEIQIP--FRQMPYKEAMENYGSDKPDLRFDLKLIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I   +    V A+    G    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFAKSNNEIFANIAKDSKKNRVKALRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  N  +   +  R +++ GD  FF AG       +    R  +
Sbjct: 358 VKED-----GLKGPLCKFFNEEDLNELIKRCELEVGDVVFFGAGVKKTVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +IN +  EF W++DFP +E N++       H+PFTMP+   E+    DL  I + 
Sbjct: 413 AGELNLINPDALEFLWVVDFPMFEQNDD-GSYSAMHHPFTMPKNIDEA----DLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 528 IGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSAASNETMRELGIKLRENIK 583


>gi|255322548|ref|ZP_05363693.1| aspartyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300456|gb|EET79728.1| aspartyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 594

 Score =  583 bits (1502), Expect = e-164,   Method: Composition-based stats.
 Identities = 247/598 (41%), Positives = 343/598 (57%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
           + R+H C DL  +D+G  V L GWV+  R HGG+IFLD+RD  G+ Q+V +P    +  E
Sbjct: 11  KMRSHYCTDLSSADIGKEVTLCGWVNTYRDHGGVIFLDLRDRTGLIQIVCDPADSKSSHE 70

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  VR E+VL I G V +R    +N  + TG+IE+ A ++ + + +E LP  V G+   
Sbjct: 71  AASHVRDEYVLRIKGKVRARGEGLVNPRLKTGEIEVVADEVIVENPSETLPF-VIGDESV 129

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR KYRFLDLR + L      R++   + R  +    FIE  TPILT ++PEGARD+
Sbjct: 130 NEDIRLKYRFLDLRNEKLQNIFKMRSKAAIAARNSLDKMGFIEFETPILTRATPEGARDY 189

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 190 LVPSRVYPGQFYALPQSPQLFKQLLMCSGFDKYFQIAKCFRDEDLRADRQP-EFTQIDIE 248

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+ Q+DILN  EN+L+ VF        +   F R+ Y +A   YG+DKPDLR  + M 
Sbjct: 249 MSFIGQEDILNMAENMLKDVFAACG--YDIQIPFRRMSYKEATETYGSDKPDLRYDLKMI 306

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAY 358
           +V + F  S   +FSKI +      + A+    G    ++   +R  E+ R  G  GL Y
Sbjct: 307 DVIDIFARSSNEIFSKIATEPKKNRIKALKVPNGDNIFSKREMNRFEEFVRKFGAQGLGY 366

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
              + D        GP+ K     + + I  R +++ GD  FF AG       +    R 
Sbjct: 367 FQMKED-----GLKGPLCKFFEQSDLDEIVERCELKVGDVVFFGAGKKKVVLDYMGRFRI 421

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+++GII+ N  EF W++DFP +E N++       H+PFTMP+   E     DL  I 
Sbjct: 422 FLAEQMGIIDQNKMEFLWVLDFPMFEQNDD-GSYSAMHHPFTMPKNIDE----PDLEDIL 476

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  +D+V NG+E+  G +R H ++V  + F  +GI +     +FG L  A   G PPHGG
Sbjct: 477 SVAHDVVLNGYELGGGSVRIHKNDVQQKVFKLLGIDEAEQREKFGFLLDALSFGAPPHGG 536

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA G DR+ ML+    ++R+V  FP +Q     L  +PS  S EQLRELGLR+ E  K
Sbjct: 537 IAIGFDRLNMLVNKTSSIRDVIAFPKTQRAQCPLTKAPSEASGEQLRELGLRLREKEK 594


>gi|325995895|gb|ADZ51300.1| Aspartyl-tRNA synthetase [Helicobacter pylori 2018]
          Length = 577

 Score =  583 bits (1502), Expect = e-164,   Method: Composition-based stats.
 Identities = 223/591 (37%), Positives = 343/591 (58%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKIIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R A   N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKHVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+     +T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQAIFKAIG--HTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E       GP+ K L+    ++I  + D+Q GD  FF AGD      +    R  +A+
Sbjct: 358 ENE-----VKGPLVKFLSEKGLKSILEKTDVQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|167772469|ref|ZP_02444522.1| hypothetical protein ANACOL_03847 [Anaerotruncus colihominis DSM
           17241]
 gi|167665572|gb|EDS09702.1| hypothetical protein ANACOL_03847 [Anaerotruncus colihominis DSM
           17241]
          Length = 592

 Score =  583 bits (1502), Expect = e-164,   Method: Composition-based stats.
 Identities = 222/594 (37%), Positives = 325/594 (54%), Gaps = 12/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EI 61
            RT  CG    +D G    + GWV RVR  G ++F+D+RD  G+ Q+  +  +A      
Sbjct: 8   KRTDYCGTFTAADDGRQAVVCGWVQRVRDKGMLVFIDLRDRTGVMQLAFDDKTAADLRAK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A++VR+E+VL   G V  R  E++N +I TG++EL    + IL+ A+  P  +  +    
Sbjct: 68  AQTVRAEFVLMAKGTVRRR--ESVNRDIPTGEVELYVDDLRILARAQTPPFEITDQTNVK 125

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +YR+LDLRR  +   ++ R +I+ +         FIE  TP L  S+PEGARD+L
Sbjct: 126 EELRLRYRYLDLRRSEMQHALLMRHKIVKAAHDYYDENGFIEIETPALIKSTPEGARDYL 185

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV+ G+FYALPQ+PQQYKQ+LM SGFDRY QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 186 VPSRVHPGAFYALPQSPQQYKQMLMLSGFDRYMQIARCFRDEDLRADRQP-EFTQIDLEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV++DD++   E  ++ VF E          FLR+ YD+A+RR+G+DKPD+R  + + +
Sbjct: 245 SFVDEDDVMTVNEGFMKRVFHEVLGVEI-ETPFLRMPYDEAMRRFGSDKPDVRFGMELTD 303

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++      F+VF   L                  +R   D++ ++ R+    GLA+   
Sbjct: 304 LSDLLSDCAFKVFRGALDAGGSVRAINAKGAADHLSRKEIDKLADFVRTYRAGGLAFTRL 363

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHI 420
             D            K L     +AIR R+  + GD    +  G            R  +
Sbjct: 364 THDAE-----SSSYEKFLTDTEKDAIRARMGAEKGDVILIVADGKNQTVFDSLGALRVEL 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
              LG+I    F+F W+  FP +E++EEE +    H+PFT P         +D    +A 
Sbjct: 419 GSRLGLIKPGVFKFLWVTQFPLFEYSEEEDRYVAKHHPFTHPAFEDIDRVESDPGVCRAR 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR +  E+  + F  +G S E    RFG L  AF+ G PPHGG+A
Sbjct: 479 AYDMVLNGCEVGGGSIRINTPELQERMFRALGFSTEEARARFGYLIDAFKFGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G+DR+VML+L   ++R+V  FP  QN  +L+   P+ V  + LREL L +V+ 
Sbjct: 539 YGLDRLVMLMLEKDSIRDVIAFPKVQNASELMTQCPAEVDEKALRELSLAVVKE 592


>gi|320450610|ref|YP_004202706.1| aspartyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320150779|gb|ADW22157.1| aspartyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 581

 Score =  583 bits (1502), Expect = e-164,   Method: Composition-based stats.
 Identities = 242/596 (40%), Positives = 339/596 (56%), Gaps = 24/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    VG  V L GW++R R  GG+IFLD+RD  G+ Q+VA+P+S  ++ A+ 
Sbjct: 3   RTHFAGSLREEHVGEEVVLEGWINRRRDLGGLIFLDLRDREGLVQLVAHPESPAYKEAER 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG------ER 118
           VRSEWV+   G V  R     N  + TG +E++   +E+LS A   P PV        E+
Sbjct: 63  VRSEWVVRARGTVRLRPEP--NPRLPTGAVEVALTSLEVLSEARTPPFPVDAGWRGEEEK 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  E +R KYR+LDLRR  + +N+  R R+I ++   +  E FI+  TP LT S+PEGAR
Sbjct: 121 EVSEELRLKYRYLDLRRRKMQENLRLRHRVIKAIWDFLDREGFIQVETPFLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP R   G FYALPQ+PQ +KQ+LM +GFDRYFQIA CFRDED R+DR P +F Q+D
Sbjct: 181 DFLVPYRQQPGLFYALPQSPQLFKQMLMVAGFDRYFQIARCFRDEDLRADRQP-DFTQMD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE +DIL   E ++  VF E      +   F R+ Y +A+ R+G+DKPD R  + 
Sbjct: 240 LEMSFVEVEDILELNERLMAHVFREALGVE-LPLPFPRLTYQEAMERFGSDKPDTRFGLE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +  V   F  SEF+VF +        +  A+P      +R     + E A+  G  GLA+
Sbjct: 299 LKEVGYLFRESEFQVFREA----ERVKALAVP---KALSRKEIADLEELAKRHGAKGLAF 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
              R++E G     G VAK L  +  +++    +   GD+  F+AG      +     R 
Sbjct: 352 A--RVEEGG---FTGGVAKFLEPMQ-QSLLEATEATPGDTLLFVAGTAKVAATALGQVRL 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+ L +     F F W++DFP  EW+EE  +  + H+PFT P      L   D   ++
Sbjct: 406 KLAEVLDLPREG-FRFLWVVDFPLLEWDEERGQYTYMHHPFTSPHPEDLPLLDTDPGKVR 464

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG E+  G IR H   +  + F  +GI +E    +FG    A   G PPHGG
Sbjct: 465 ALAYDLVLNGTEVGGGSIRIHDPALQARMFQVLGIGEEEQREKFGFFLEALTYGAPPHGG 524

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA G+DR++ L+  + ++REV  FP ++   D L G+PS VS EQLRELGL ++ +
Sbjct: 525 IAWGLDRLLALMTASPSIREVIAFPKNKEGKDPLTGAPSPVSEEQLRELGLMVIAH 580


>gi|257064755|ref|YP_003144427.1| aspartyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256792408|gb|ACV23078.1| aspartyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 593

 Score =  583 bits (1502), Expect = e-164,   Method: Composition-based stats.
 Identities = 227/596 (38%), Positives = 338/596 (56%), Gaps = 16/596 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-- 58
           MH    H+CG+L + DV + V L+GWV R R  G +IF+D+RD  G TQV+ +PD     
Sbjct: 10  MH---DHTCGELRLKDVDTEVVLTGWVWRTRDLGALIFIDLRDREGYTQVIVDPDCVSAE 66

Query: 59  -FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F+ A+S+  E+V+ + G V SR     N ++ TG+IE+ A  IEIL+ +   P  +   
Sbjct: 67  DFKKAESLGREYVIKVVGKVRSRGEAAFNHDMATGEIEVLASAIEILNTSVTPPFHIEDG 126

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            E  E +R K+R++DLRR  + + I  R  +  +MR  +    FIE  TPIL  S+PEGA
Sbjct: 127 SETDEIMRMKWRYMDLRRPEMFQTIKLRHTVAQAMRGALNKRGFIEVETPILANSTPEGA 186

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RDFLVPSR N G FYALPQ+PQQ+KQ+LM  G +RY+QIA CFRDED R+DR P EF Q+
Sbjct: 187 RDFLVPSRPNPGKFYALPQSPQQFKQMLMCGGIERYYQIARCFRDEDLRADRQP-EFTQV 245

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFVE +D+++ ME+V++ V E  +          R+ Y DA+  YG D+PD+R  +
Sbjct: 246 DVEMSFVEGEDVMDMMESVMQEVLEAVN--VEHEFPLQRMQYADAMEYYGCDRPDIRFDM 303

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN-EWARSQGQPGL 356
            + N++E      F VF+K +      +       G   +R   +++    AR  G  G+
Sbjct: 304 KLVNLSEIVRDCGFGVFAKTVESGGVVKAVNCKGAGD-WSRGEIEKLEANVARPNGAKGM 362

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+  + +   G     G   K L      AI+  +D + GD   F A       +  +  
Sbjct: 363 AW--FAITSEGKEK--GSFIKFLGEETFAAIKEAVDAEPGDLVCFAADKAPVANAVLSAI 418

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R H+A  L  I        W+++FP + ++ EE K    H+PFTM     + L  +D L+
Sbjct: 419 RLHMADALN-IPREGHALLWVVNFPMFGYDPEEGKYSAEHHPFTMVPPDQQHLIEDDPLA 477

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             ++ YDLV +GFE   G IR H +++  +     G++ E ++ +FG L RA + G PPH
Sbjct: 478 CGSYSYDLVMDGFEAGGGTIRVHNADLQRRVLRRCGLTDEEIDEKFGHLLRALELGAPPH 537

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GGIA G+DR+VMLL G +++R+V  FP + +  D +  +PS V+  QL E+ LR++
Sbjct: 538 GGIALGLDRLVMLLAGKQSIRDVIAFPKTTSASDPMTNAPSEVTERQLTEVNLRLM 593


>gi|227893459|ref|ZP_04011264.1| aspartate--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227864738|gb|EEJ72159.1| aspartate--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 617

 Score =  583 bits (1502), Expect = e-164,   Method: Composition-based stats.
 Identities = 221/606 (36%), Positives = 342/606 (56%), Gaps = 13/606 (2%)

Query: 1   MHR--YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           M +   RT  CG++    +G  V L GWV RVR  G ++F+D+RD  G+ Q+V N DS  
Sbjct: 1   MEKIEKRTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGK 60

Query: 59  F--EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +IA S+ +E+VL + G V+ RS   +N ++ TGQ+E+ A  I +L+ A+  P  +  
Sbjct: 61  ELMDIADSLGNEYVLQVKGKVVKRSE--VNPDMKTGQVEVDATDIIVLNKAKNPPFEIKN 118

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             E  E  R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEG
Sbjct: 119 GVEISEQTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEG 178

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q
Sbjct: 179 ARDYLVPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQ 237

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +DMEMSF +++ I    E +L+ + ++    + +     RI + D++ +YG DKPD R  
Sbjct: 238 IDMEMSFADEETIQGYTEGLLKKIMKDVKGID-LKTPIKRITWTDSMNKYGCDKPDTRYG 296

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           +++H+++  F  S+F+VFS  ++     +  A+       +R   D+  ++ +     GL
Sbjct: 297 MLIHDLSPIFKDSDFKVFSGAIAGGGFVKGIAVKNGAKAYSRKKIDKKADYIKRFHAKGL 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A++ +   E G  +  GPVA+ L   N  A++   D++ G+   FIA      C      
Sbjct: 357 AWVKF---EDGEFS--GPVARFLTDENKAALKKEFDLEGGELVVFIADKWKVCCDSLNHL 411

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R   A E GII    ++F W++D+P +E++E   +   AH+PFTMP      L   +   
Sbjct: 412 RREFAHETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHK 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG E+  G IR H   +    F  +G +K+    +FG L  A   G PPH
Sbjct: 472 AHARSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+A G+DR  M+L    N+R+V  FP + +  + +M +P+ V+ +QL +LG+ +    +
Sbjct: 532 AGLAIGLDRFAMMLADKDNIRDVLAFPKNASASEPMMHAPAPVADQQLNDLGIEVENKYQ 591

Query: 597 KILKIS 602
             +K +
Sbjct: 592 DSVKAT 597


>gi|298385641|ref|ZP_06995199.1| aspartate--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298261782|gb|EFI04648.1| aspartate--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 587

 Score =  582 bits (1501), Expect = e-164,   Method: Composition-based stats.
 Identities = 226/600 (37%), Positives = 336/600 (56%), Gaps = 18/600 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            +RTH+CG+L +SDV   + LSGWV R R  GG+ F+D+RD YGITQ+V N +      +
Sbjct: 1   MFRTHTCGELRISDVNKQITLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ I G V  R ++  NANI TG IE+   ++ +L+ A   P  +    + 
Sbjct: 61  RANKLGREFVIQITGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR+ +  N+  R ++   +R  + +  FIE  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI++T E + + +F+       ++  F R+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDIISTFEGMAKHLFKTLRGVE-LTEPFQRMPWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     V                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDIMKGYGFSVFDNAAYVGG-----ICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  G V     V K       + ++     + GD    ++GD + K      + R
Sbjct: 352 A--RVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  ++
Sbjct: 408 LEMGSQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVVNGVEVGGGSIRIHDAQLQARMFEILGFTPEKAQAQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L +     K
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSEIDQTQLDELNLIVDIKENK 587


>gi|116618407|ref|YP_818778.1| aspartyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122271393|sp|Q03WL7|SYD_LEUMM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116097254|gb|ABJ62405.1| aspartyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 591

 Score =  582 bits (1501), Expect = e-164,   Method: Composition-based stats.
 Identities = 217/597 (36%), Positives = 327/597 (54%), Gaps = 10/597 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEI 61
             RT+  G +  + +   V L+GWV + R  G +IF+D+RD  GI Q+  N  ++    +
Sbjct: 1   MKRTNYAGLIDETYLNQTVTLTGWVQKRRDFGDLIFVDLRDREGIVQLTFNATNADALAV 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VRSE+VL I G V+ R+   IN  I +G IE+   + EILS ++  P  +  +    
Sbjct: 61  AEKVRSEYVLKITGHVIERAENQINTKIKSGTIEVDVTEAEILSTSKTPPFYIEDDVNAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E ++ +YR+LDLRR  + KN+  R++I++S    M   +FI   TP+L  S+PEGARD+L
Sbjct: 121 EELKLQYRYLDLRRPEMQKNLRIRSKIMSSAMHFMDTHDFINIETPVLAKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  GSFYALPQ+PQ +KQLLM +GFDRYFQIA  FRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVFPGSFYALPQSPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQP-EFTQMDVET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+  D+I   +   ++ +  +  + +  +     + + +++ R+GTDKPDLR    + +
Sbjct: 240 SFMTADEIRELVNAWVKAMMHDVVDFDLDTAEIPTLTWQESMDRFGTDKPDLRIAYEIKD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E   +SEF VF+  +      +  A+P      +R   D++ ++    G  GLA++  
Sbjct: 300 LSETVKNSEFGVFANAIKGGGVVKALAVPGGADHYSRKDIDKLTKYIERFGAKGLAWMKV 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                      GP+AK  +     A+    D Q GD   F AG      +     R   A
Sbjct: 360 -----APEGLTGPIAKFFDDEAQAALIASADAQVGDLLLFGAGRADVVSATLDYLRRETA 414

Query: 422 QELGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           + L +I+  N + F WI+D+P +E++E+  +   AH+PFTMP            D     
Sbjct: 415 KALDLIDQTNPWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPNEEDLHYLNDGEDPHKAH 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+ SG IR H  ++  +    +G + E     FG L    + G PP GG
Sbjct: 475 AQSYDLVLNGYELGSGSIRIHRMDIQEKMLKALGFTPEKAHEAFGFLLEGMEYGFPPMGG 534

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DR+ MLL G +N+REV  FP +    + +  +P+ V  +QL ELGL + E  
Sbjct: 535 IALGLDRLAMLLAGQENIREVIAFPKNSRATEPMTEAPTRVEGKQLNELGLFVPEAE 591


>gi|222823655|ref|YP_002575229.1| aspartyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|222538877|gb|ACM63978.1| aspartyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 583

 Score =  582 bits (1500), Expect = e-164,   Method: Composition-based stats.
 Identities = 240/596 (40%), Positives = 340/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTH   +L + +VG  V L GWV+  R HGG+IF+D+RD  G+ Q+V +P  +     IA
Sbjct: 2   RTHYNTELNIQNVGEEVTLCGWVNSYRDHGGVIFIDLRDRSGLIQLVCDPADNQEAHNIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+VL   G +  R    +N  + TG+IE+   K+ I + +  +     G+    E
Sbjct: 62  SSVRNEYVLIAQGKIRPRGEGLVNPKLKTGEIEVVINKLTIENES-AVVPFAIGDESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L+ N   R+    + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRSKKLYDNFALRSTACIAARNSLSNMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ DI+   EN+L+ +F+       +S  F ++ Y +A+  YG+DKPDLR  +   +V
Sbjct: 240 FCEQKDIIAMAENLLKDIFKACGKE--ISIPFRQMSYKEAMENYGSDKPDLRFDMKFIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + FV S   +F+ I        + A+    G    ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFVKSNNEIFANIAKDTKKNRIKALRVPKGDTIFSKRQMQRFEEFVRKFGAAGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   +  R  ++ GD  FF AG       +    R  +
Sbjct: 358 MKED-----GPKGPLCKFFSEEDLNVLIQRCQLEIGDVVFFGAGAKKTVLDYMGRFRLFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A E+ II+ +  EF W++DFP +E N++       H+PFTMP+   E     DL  I + 
Sbjct: 413 ADEMKIIDEDKLEFLWVVDFPMFEQNDD-GSYSAMHHPFTMPKNIDEQ----DLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +D+V NG E+  G IR H S +  + F  + I +E    +FG L  A   G PPHGGIA
Sbjct: 468 AHDVVLNGVELGGGSIRIHKSTIQEKVFKLLNIDEEEQRKKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++MLL  + ++REV  FP +Q    L+  +PS VS EQ+RELG+R+ EN K
Sbjct: 528 IGLDRLIMLLTKSSSIREVIAFPKTQRAQCLMTQAPSEVSNEQMRELGIRLRENTK 583


>gi|291541528|emb|CBL14638.1| aspartyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 582

 Score =  582 bits (1500), Expect = e-164,   Method: Composition-based stats.
 Identities = 266/592 (44%), Positives = 375/592 (63%), Gaps = 15/592 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + YRT +CG+L   ++G  VR++GWV  +R HGG++FLDIRD YG+ QVV + D    E+
Sbjct: 5   NEYRTVTCGELREENIGQQVRVAGWVENIRDHGGVMFLDIRDQYGVLQVVVHND----EL 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
            K +  E  + + G V+ R  ETIN  I TG +E+  + I++L   + + P  V      
Sbjct: 61  LKDINKECTVTLSGTVVKRDEETINKKIATGFVEVHTEDIKVLGKCKNVLPFEVATSTNT 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYRFLDLR   +H NI+ R++II  +R +M    F+E  TPIL+ SSPEGARD+
Sbjct: 121 NEEVRLKYRFLDLRNPKVHNNIMIRSQIITFLRNKMNEMGFMEIQTPILSTSSPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           L+PSR ++G FYALPQAPQ +KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 181 LIPSRKHKGRFYALPQAPQIFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F  Q+D+    E VL   F++FSN       F RI Y +++ +YGTDKPDLRNP+++ 
Sbjct: 241 MAFATQEDVFAVAEEVLYETFKKFSNKEVSKPPFARIPYAESMLKYGTDKPDLRNPLVIV 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +++ F  ++F  F K            +P    G ++ +  +M E+A S G  GL Y+ 
Sbjct: 301 EISDMFEETDFAPFRK-----KTVRSINVP-NAAGQSKKWFKKMEEFALSIGMKGLGYVK 354

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R D    +   GP+ K L   + E +  R   + GD  +FIA    +    A   R  +
Sbjct: 355 VRDD----LTFDGPIDKFLKEGDREELISRNGSKAGDVIYFIADTAQEAPKLAGQIRTEV 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ L +I+ + FE C+I+DFP +E +EE  KI F HNPF+MPQGG++SL   D   + A+
Sbjct: 411 AKRLDLIDTSRFEMCFIVDFPMFERDEETNKIIFTHNPFSMPQGGLDSLLNKDPEEVLAY 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  E+M +AF   G S++ ++ +F  LY AFQ G PPH G+A
Sbjct: 471 QYDIVCNGVELSSGAVRNHDIEIMKKAFELAGYSEDDLKAKFSALYNAFQYGAPPHAGMA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR++MLL   +N+REV  FPM+ N  DLL+GSP  V+ +QLRE+ +++ 
Sbjct: 531 PGVDRMIMLLTEEENIREVIAFPMNSNAQDLLLGSPGEVTEQQLREVHIKLR 582


>gi|227431711|ref|ZP_03913741.1| aspartyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352535|gb|EEJ42731.1| aspartyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 591

 Score =  582 bits (1500), Expect = e-164,   Method: Composition-based stats.
 Identities = 217/597 (36%), Positives = 327/597 (54%), Gaps = 10/597 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEI 61
             RT+  G +  + +   V L+GWV + R  G +IF+D+RD  GI Q+  N  ++    +
Sbjct: 1   MKRTNYAGLIDETYLNQTVTLTGWVQKRRDFGDLIFVDLRDREGIVQLTFNATNADALAV 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ VRSE+VL I G V+ R+   IN  I +G IE+   + EILS ++  P  +  +    
Sbjct: 61  AEKVRSEYVLKITGHVIERAENQINTKIKSGTIEVDVTEAEILSTSKTPPFYIEDDVNAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E ++ +YR+LDLRR  + KN+  R++I++S    M   +FI   TP+L  S+PEGARD+L
Sbjct: 121 EELKLQYRYLDLRRPEMQKNLRIRSKIMSSAMHFMDTHDFINIETPVLAKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  GSFYALPQ+PQ +KQLLM +GFDRYFQIA  FRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRVFPGSFYALPQSPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQP-EFTQMDVET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+  D+I   +   ++ +  +  + +  +     + + +++ R+GTDKPDLR    + +
Sbjct: 240 SFMTADEIRELVNAWVKAMMHDVVDFDLDTAEIPTLTWQESMDRFGTDKPDLRIAYEIKD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E   +SEF VF+  +      +  A+P      +R   D++ ++    G  GLA++  
Sbjct: 300 LSETVKNSEFGVFANAIKGGGVVKALAVPGGADHYSRKDIDKLTKYIERFGAKGLAWMKV 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                      GP+AK  +     A+    D Q GD   F AG      +     R   A
Sbjct: 360 -----AQEGLTGPIAKFFDDEAQAALIDSADAQVGDLLLFGAGRADVVSATLDYLRRETA 414

Query: 422 QELGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           + L +I+  N + F WI+D+P +E++E+  +   AH+PFTMP            D     
Sbjct: 415 KALDLIDQTNSWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPNEEDLHYLNDGEDPHKAH 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+ SG IR H  ++  +    +G + E     FG L    + G PP GG
Sbjct: 475 AQSYDLVLNGYELGSGSIRIHRMDIQEKMLKALGFTPEKAHEAFGFLLEGMEYGFPPMGG 534

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DR+ MLL G +N+REV  FP +    + +  +P+ V  +QL ELGL + E  
Sbjct: 535 IALGLDRLAMLLAGQENIREVIAFPKNSRATEPMTEAPTRVEGKQLNELGLFVPEAE 591


>gi|29346282|ref|NP_809785.1| aspartyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253568298|ref|ZP_04845709.1| aspartyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|46577253|sp|Q8A9E3|SYD_BACTN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|29338177|gb|AAO75979.1| aspartyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251842371|gb|EES70451.1| aspartyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 587

 Score =  582 bits (1500), Expect = e-164,   Method: Composition-based stats.
 Identities = 226/600 (37%), Positives = 336/600 (56%), Gaps = 18/600 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            +RTH+CG+L +SDV   + LSGWV R R  GG+ F+D+RD YGITQ+V N +      +
Sbjct: 1   MFRTHTCGELRISDVNKQITLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ I G V  R ++  NANI TG IE+   ++ +L+ A   P  +    + 
Sbjct: 61  RANKLGREFVIQITGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR+ +  N+  R ++   +R  + +  FIE  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI++T E + + +F+       ++  F R+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDIISTFEGMAKHLFKTLRGVE-LTEPFQRMPWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     V                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDIMKGHGFSVFDNAAYVGG-----ICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  G V     V K       + ++     + GD    ++GD + K      + R
Sbjct: 352 A--RVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  ++
Sbjct: 408 LEMGSQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVVNGVEVGGGSIRIHDAQLQARMFEILGFTPEKAQAQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L +     K
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSEIDQTQLDELNLIVDIKENK 587


>gi|256420263|ref|YP_003120916.1| aspartyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256035171|gb|ACU58715.1| aspartyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 582

 Score =  582 bits (1500), Expect = e-164,   Method: Composition-based stats.
 Identities = 226/596 (37%), Positives = 339/596 (56%), Gaps = 19/596 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YRTH+CG+L +   G+ V LSGW+  +R  G I F+D+RD YGITQ++          A
Sbjct: 1   MYRTHTCGELRLEHQGTQVSLSGWIQTIRKFGSITFVDLRDRYGITQLLFGESFNDQLDA 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +  E+V+   G V  RS +  N NI TG IE++  +  IL+ A+  P  V  + +  +
Sbjct: 61  QPLGREFVIQAKGTVTERSNK--NPNIPTGDIEITISEFTILNAAKTPPFTVQDDTDGGD 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR+ + +N+  R R+  S R  + +  F++  TP L  S+PEGARDF+V
Sbjct: 119 ELRMKYRYLDLRRNIVKQNLELRYRVNRSARNYLDSRGFMDIETPFLIKSTPEGARDFVV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N   FYALPQ+PQ +KQLLM SG+DRY+QI  CFRDED R+DR P EF Q+D EMS
Sbjct: 179 PSRMNPNEFYALPQSPQTFKQLLMVSGYDRYYQIVKCFRDEDLRADRQP-EFTQIDCEMS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+Q+DILNT EN+++ +F E     +  + F R+ +DDA+  YG DKPD+R  + + N+
Sbjct: 238 FVDQEDILNTFENMMKHIFMEIKGI-SFEDAFPRMTWDDAMEFYGNDKPDIRFDMKLVNM 296

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWAR--SQGQPGLAYI 359
            +    + F+VF     V       AI AKG     R   D + EW +    G  GL  I
Sbjct: 297 NDTAKGANFKVFDDAELV------VAICAKGCAEYTRKQLDELTEWVKRPQIGMSGL--I 348

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R +  G +     V K  +    +    +   + GD    +AG   +     ++ R  
Sbjct: 349 YARYNADGTIK--SSVDKFFDEEKLKGWAAKCQAEPGDLILVLAGKEERTRKAMSELRLE 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSI 477
           + + LG+ + N F+  W++DFP +E+ EEE +    H+PFT P+          +    I
Sbjct: 407 MGERLGLRDKNVFKPLWVIDFPLFEYAEEENRWVARHHPFTSPKPEHIEWMNDLSKYADI 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           KA  YD+V NG E+  G IR    ++  + F+ +G+S E   ++FG L  AF+ G PPHG
Sbjct: 467 KANAYDIVLNGTEVGGGSIRIFQRDLQEKMFAALGMSPEEANHKFGFLLGAFEYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIA G DR+  LL G++ +R+   FP + +  D+++ +PS +   QL EL + +V+
Sbjct: 527 GIAFGFDRLCSLLGGSETIRDFIAFPKNNSGRDVMLDAPSAIDQAQLNELKISLVK 582


>gi|312139537|ref|YP_004006873.1| aspartate-tRNA ligase asps [Rhodococcus equi 103S]
 gi|325672579|ref|ZP_08152275.1| aspartate--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|311888876|emb|CBH48189.1| aspartate-tRNA ligase AspS [Rhodococcus equi 103S]
 gi|325556456|gb|EGD26122.1| aspartate--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 593

 Score =  582 bits (1500), Expect = e-164,   Method: Composition-based stats.
 Identities = 231/601 (38%), Positives = 323/601 (53%), Gaps = 26/601 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L        V L+GWV R R HGG+IF+D+RD  G++QVV        E A  
Sbjct: 3   RTHLAGSLRPEHAEQTVTLTGWVARRRDHGGVIFIDLRDASGVSQVVFRA-GDVLEQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  I TG IE++A ++E+L+ +    LP   + +  E  
Sbjct: 62  LRAEYCVKVTGKVEVRPEGNQNFEIPTGAIEVNATELEVLNESAP--LPFQLDDQAGEEA 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR+   + I  R++   + R  +    F+E  TP LT S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRREGPGRAIRLRSKANAAARAVLAHHEFVEVETPTLTRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GSFYALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 180 RLQPGSFYALPQSPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            Q+D++   E +L  V++     + +S    R+ Y +A+RR+G+DKPDLR  I +    +
Sbjct: 239 TQEDVILLAEEILHAVWKLIG--HEISTPIARMTYAEAMRRFGSDKPDLRFDIELVECMD 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   + 
Sbjct: 297 FFKDTTFRVFQA------EYVGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVL--VG 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L     + +   +  + GD  FF AG      +    AR  IA++ 
Sbjct: 349 EDGTLG--GPVAKNLTDAERDGLAAHVGAKPGDCIFFAAGATKPMRALLGAARGEIARKQ 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGMESLKGNDL 474
            +I+ + + F WI+D P +E   +                 H+ FT P+         D 
Sbjct: 407 NLIDPDAWAFVWIVDAPMFEPTADATASGDVALGYSAWTAVHHAFTSPKPESIDTFDTDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               A+ YD+VCNG EI  G IR H  ++  + F  +GIS E  E +FG L  AF  G P
Sbjct: 467 GKALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFKVMGISHEEAEEKFGFLLDAFAFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRI  LL G  ++REV  FP S    D L  +P+ ++  Q +E G+     
Sbjct: 527 PHGGIAFGWDRITALLAGVDSIREVIAFPKSGGGVDPLTDAPAPITELQRKESGIDAKPE 586

Query: 595 P 595
           P
Sbjct: 587 P 587


>gi|87300554|ref|ZP_01083396.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87284425|gb|EAQ76377.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 606

 Score =  582 bits (1500), Expect = e-164,   Method: Composition-based stats.
 Identities = 217/602 (36%), Positives = 336/602 (55%), Gaps = 22/602 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H CGDL  S V   V LSGWV R R HGG+IF+D+RD  G  Q+  +PD     F +A
Sbjct: 2   RSHGCGDLRSSSVDQVVELSGWVDRRRDHGGVIFVDLRDRSGTVQITVDPDLGPEAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
           + +R+E V+ + G V  R  E++N  + TG++E+ A ++ +L+        P+ V  E  
Sbjct: 62  EHLRNETVVQVQGRVRLRPQESLNTRLATGEVEVLASQLTVLNAVRKPLPFPVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR+ ++ N+  R R I + R  +  + FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRERMNGNLRLRARTIQAARRFLEDQGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YLVPSRVCGGEWFALPQSPQLFKQLLMVGGLERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ Q++IL   E ++  +++       +   F R+ + +A+ RYGTD+PD R  + +
Sbjct: 241 EMSFMGQEEILELNEALIASIWKAVKGVE-LPRPFPRLSWHEAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNEWARSQGQPGLAY 358
            NV++      F+VFS  ++     +  A+P      +        + ++ +Q       
Sbjct: 300 TNVSDLVAGMGFKVFSGAVAAGGSVKCIAVPGGNEALSNVRIKPGGDVFSEAQAAGAGGL 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
            F R+ E G +  +G +  +L+      +  R     G    F AGD           R 
Sbjct: 360 AFIRVREGGEIDTIGAIKDNLSADTKAELLARTGAVPGTLLLFGAGDTATVNKALDRVRQ 419

Query: 419 HIAQELGII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           ++A+ELG++    + + + F W++DFP +E+N  E +++  H+PF  P        GND 
Sbjct: 420 YLARELGLVPADRDNDTWNFLWVVDFPMFEFNAGENRLEALHHPFCAPNPDD---LGNDP 476

Query: 475 L-------SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                   + +A  YDLV NG E+  G +R H S +  Q    +G+  E  E +FG L  
Sbjct: 477 AQWAETLPTARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTIGLPLEEAERQFGFLME 536

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           A   G PPHGG+A G+DR+VMLL G +++R+   FP +Q    LL  +P+ V+ +QL +L
Sbjct: 537 ALDLGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFPKTQQARCLLTQAPAGVAPQQLEDL 596

Query: 588 GL 589
            +
Sbjct: 597 HV 598


>gi|15611627|ref|NP_223278.1| aspartyl-tRNA synthetase [Helicobacter pylori J99]
 gi|6919975|sp|Q9ZLL9|SYD_HELPJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|4155111|gb|AAD06143.1| ASPARTYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 579

 Score =  582 bits (1499), Expect = e-164,   Method: Composition-based stats.
 Identities = 225/592 (38%), Positives = 340/592 (57%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R A   N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKSVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++DD++  +E++L+ +F+     +T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DEDDVMGVVEDLLQEIFKAIG--HTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNSIFSNIAQDPKDKRIKALNVKGADAVFSRSVLKELEEFVRQFGAKGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  R D Q GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W++ FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVHFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ + 
Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRKP 578


>gi|315931838|gb|EFV10793.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 575

 Score =  582 bits (1499), Expect = e-164,   Method: Composition-based stats.
 Identities = 236/588 (40%), Positives = 339/588 (57%), Gaps = 18/588 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWV 70
           G+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+      EIA + R+E+V
Sbjct: 2   GISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIASNARNEFV 61

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L  +G +  R    +N  + TG+IE+   K+ I + +  +P     +    E +R KYRF
Sbjct: 62  LIAEGTIRPRGEGLVNPKLKTGEIEVVVSKLTIENES-AVPPFAIADESVNEELRLKYRF 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LVPSRV+QG 
Sbjct: 121 LDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLVPSRVHQGE 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMSF EQ D++
Sbjct: 181 FYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMSFCEQKDVI 239

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           N  E  L+ +F+       +   F ++ Y DA+  YG+DKPDLR  +   +V + F  S 
Sbjct: 240 NVAETFLKDIFKACGKE--IQTPFRQMQYKDAMENYGSDKPDLRFNLKFIDVIDIFAKSN 297

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
             +F+ I        + AI    G    ++    R  E+ R  G  GLA+I  + D    
Sbjct: 298 NEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQVKED---- 353

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
               GP+ K  +  +   +  R +++ GD  FF AG       +    R  +A EL +I+
Sbjct: 354 -GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRIFLANELNLID 412

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            N  EF W++DFP +E N++       H+PFTMP+   E     DL  I +  YD+V NG
Sbjct: 413 PNALEFLWVVDFPMFEQNDD-GSYSAMHHPFTMPKNIDE----TDLEEISSIAYDVVLNG 467

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
            E+  G IR H +++  + F  + I +E  + +FG L  A   G PPHGGIA G+DR++M
Sbjct: 468 VELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIAIGLDRLIM 527

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           L+ GA ++REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 528 LVTGANSIREVIAFPKTQRAQCLMTDAPSPASNEAMRELGIKLRENIK 575


>gi|294786980|ref|ZP_06752234.1| aspartate--tRNA ligase [Parascardovia denticolens F0305]
 gi|315226621|ref|ZP_07868409.1| aspartate--tRNA ligase [Parascardovia denticolens DSM 10105]
 gi|294485813|gb|EFG33447.1| aspartate--tRNA ligase [Parascardovia denticolens F0305]
 gi|315120753|gb|EFT83885.1| aspartate--tRNA ligase [Parascardovia denticolens DSM 10105]
          Length = 598

 Score =  582 bits (1499), Expect = e-164,   Method: Composition-based stats.
 Identities = 231/610 (37%), Positives = 337/610 (55%), Gaps = 33/610 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH C D+  + +G  V +SGWV R R HGG+ FLD+RD  G+ QVV   +    E+A+
Sbjct: 6   YRTHHCADITEAVIGQEVTISGWVDRRRDHGGVAFLDVRDASGLVQVVIYEE----EVAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-------EELPLPVFG 116
            +RSE+V+ + G V  R     N ++ TG++E+ A+K+ +L+ +                
Sbjct: 62  PLRSEFVVQVTGDVRERPEGNENDHLATGKVEIVARKVTVLAKSAALPFQVSTALANETE 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           E+   E  R ++R+LDLRR  + +N+  R+ +  + R  +    F E  TP L  S+PEG
Sbjct: 122 EQLPGEDTRLRFRYLDLRRPQMQRNLRLRSNMARAARGELDKLGFTEVETPTLIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R++ GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLSPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEMSFV+Q+D++   E VL+ V+E  S G  V+  F RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMSFVDQEDVIAMAEQVLKAVWE--SAGYQVATPFPRITWTDAMNKYGSDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             + ++T++F  + FRVF         Y    +        R   D   EWAR +G  GL
Sbjct: 299 NPLVDLTDYFKDTPFRVFQAP------YVGAVVYQGAADLPRRQFDAWQEWARQRGAKGL 352

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E G +   GPVAK+L+    + +   +  Q GD+ FF AG           A
Sbjct: 353 AYVQF--SEDGVLK--GPVAKNLSDAERDGLMKAVHAQPGDAVFFAAGARESSQLLLGAA 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  IA+  G+++ + F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 409 RVEIAKRQGLLHKDEFAFTWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSAAWI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG EI  G +R H  ++  +    +GI +E   ++FG L  
Sbjct: 469 DKFDQDPEHAMSDSYDIVCNGNEIGGGSVRIHRDDIQDRVLEVLGIGEEEARDKFGFLLE 528

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH GIA G DR   +L G  ++R+V  FP S    D L G+P+ +S EQ  E 
Sbjct: 529 AFKYGAPPHAGIAFGWDRCAAILSGEDSIRDVIAFPKSGGGADPLTGAPAPISDEQRAET 588

Query: 588 GLRIVENPKK 597
           G+       K
Sbjct: 589 GVDYDPEEDK 598


>gi|312879712|ref|ZP_07739512.1| aspartyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783003|gb|EFQ23401.1| aspartyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 600

 Score =  582 bits (1499), Expect = e-164,   Method: Composition-based stats.
 Identities = 228/589 (38%), Positives = 323/589 (54%), Gaps = 13/589 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            RT  CGDL + D G  V L+GW+ R R  GGIIFL++ DH G TQVV NP+      E 
Sbjct: 11  KRTDRCGDLRLGDQGRSVVLNGWLRRRRDLGGIIFLELWDHTGTTQVVLNPERAPEVHER 70

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK +RSE+VL + G V  R   T N  + TG++E+  +   +LS ++ LP  +    +  
Sbjct: 71  AKDLRSEYVLAVKGRVSVRPEGTENPGMPTGEVEVLVEDFLLLSPSKPLPFEIGEAEKVD 130

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R +YRFLDLRR+ + +N+  R  +    R  +    F+E  TP+LT S+PEGARDFL
Sbjct: 131 ENLRLRYRFLDLRRERMQQNLRVRHAVGAYTRNYLGERGFMEVETPMLTKSTPEGARDFL 190

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G F+ALPQ+PQ +KQ+LM SG DRYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 191 VPSRVNPGRFFALPQSPQIFKQILMVSGCDRYFQIVKCFRDEDLRADRQP-EFSQVDLEM 249

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV ++D+   +E  + G+F E  +       F R+ + +A+ RYG+DKPDLR P  + +
Sbjct: 250 SFVTEEDLYELLEGYMAGLFREVLDLEI-PTPFPRMTWKEAMDRYGSDKPDLRIPTALVD 308

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           + +             ++         +P  G   +R     +   A   G  GLA I  
Sbjct: 309 LGDLLGAPGGP-LESTVAAGGAVRGLPLP-GGASLSRKEVADLEARAVELGAGGLACIQR 366

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADARNHI 420
           +     N    GP  K L+      +  R D+ DGD+   +A     + C      R  +
Sbjct: 367 K-----NGELKGPFVKALDEATRGRLAERGDLADGDALLVVADKEWKRVCEVLGQLRLEL 421

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+   ++    + F W++DFP  EW+EE+ +    H+PFT P+     L   D  ++++ 
Sbjct: 422 ARARNLV-EEGWRFLWVVDFPLLEWDEEQGRYTAVHHPFTAPKDEDLPLLDTDPGAVRSR 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H  ++  + F  +  + E    RFG L  A   G PPHGG+A
Sbjct: 481 AYDLVLNGNEVGGGSIRIHNPQMQERVFQALAFTPEAARERFGFLLEALSYGTPPHGGLA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            G DR+ MLL GAK++REV  FP +Q    LL G+P  V   QL EL +
Sbjct: 541 LGFDRLAMLLCGAKSIREVMAFPKTQRAQCLLSGAPGVVDEAQLAELQV 589


>gi|297379816|gb|ADI34703.1| aspartyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 577

 Score =  582 bits (1499), Expect = e-164,   Method: Composition-based stats.
 Identities = 220/591 (37%), Positives = 336/591 (56%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+     + VS  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAIG--HNVSKPFKRMPYKEAMENYGSDKPDLRFGLPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAVFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GVKGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|169335837|ref|ZP_02863030.1| hypothetical protein ANASTE_02263 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258575|gb|EDS72541.1| hypothetical protein ANASTE_02263 [Anaerofustis stercorihominis DSM
           17244]
          Length = 585

 Score =  582 bits (1499), Expect = e-164,   Method: Composition-based stats.
 Identities = 223/590 (37%), Positives = 342/590 (57%), Gaps = 8/590 (1%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVR 66
           C ++   D+G  V LSGWV R R  GG+IF+ +RD  GI Q+VAN +     FE A+++R
Sbjct: 2   CAEITKEDLGKKVTLSGWVQRRRDLGGVIFIHLRDRSGIMQLVANSELNKEVFETAENIR 61

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +E+VL + G V+ R  E  N NI TG++EL    +E+L  A   P+ +       E+ R 
Sbjct: 62  NEYVLKVSGEVVLRDEENFNPNIETGELELKLDTMEVLDSANTPPIYIDESDNANEATRL 121

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           +YRFLDLR+D +  N++ R +  + +R  + +E F+E  TP L   +PEGARDFLVPSR+
Sbjct: 122 EYRFLDLRKDKIKNNLITRAKTCSVVRNFLDSEGFLEIETPFLGKPTPEGARDFLVPSRI 181

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            +G F+ LPQ+PQ +KQ+LM SG DRY+QI  CFRDED R DR P EF Q+D+EMSFV+ 
Sbjct: 182 RKGKFFGLPQSPQLFKQILMVSGMDRYYQIVKCFRDEDLRQDRQP-EFTQIDLEMSFVDV 240

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           DD+++  E +++ VF+E  + +      +R+ + +A+ R+G+DKPD R  + + ++++  
Sbjct: 241 DDVIDVNERLVKKVFKEIIDYDI-EAPIMRMEFSEAMDRFGSDKPDTRFGMELFDLSDLL 299

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366
              +F VF+  +                  +R   D + ++ ++ G  GLA+I    D  
Sbjct: 300 KDCKFNVFAGPIKNGGSVRAINAKGLADFFSRRDIDALVDYVKTYGAKGLAWIAVNEDG- 358

Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426
              +    + K L+   T+ I  R   ++GD  F +A           + R HIA++  I
Sbjct: 359 ---SIKSQITKFLSEEETKGILDRAKAENGDIVFIVADKNKVVYDSLGNLRLHIAKKAEI 415

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
                F F W+ +FP +E++E EK+    H+PFT P         ++   ++A  YDLV 
Sbjct: 416 KMDEGFNFLWVTNFPMFEYDENEKRYKAMHHPFTAPMDEDLDKLESEPGEVRAKAYDLVV 475

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           NG E+  G IR H  EV  + F+ +G S E  EN+FG L +A + G PPHGG+A G+DR+
Sbjct: 476 NGVEMGGGSIRIHSGEVQQKVFNVLGFSDEEAENKFGFLLKALKYGTPPHGGLAFGLDRM 535

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +MLL+  +N+R+V  FP +QN   L+  +PS VS EQL ELG+ +V+  +
Sbjct: 536 IMLLVDTENIRDVIAFPKTQNHTCLMSDAPSIVSEEQLEELGIEVVDEEE 585


>gi|313205695|ref|YP_004044872.1| aspartyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445011|gb|ADQ81366.1| aspartyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315022587|gb|EFT35613.1| aspartyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325336862|gb|ADZ13136.1| Aspartyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 582

 Score =  581 bits (1498), Expect = e-163,   Method: Composition-based stats.
 Identities = 208/595 (34%), Positives = 335/595 (56%), Gaps = 19/595 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACF 59
            +RTH+ G+L + ++   V LSGWV  +R  G ++++D+RD YGITQ+V + +       
Sbjct: 1   MFRTHTNGELSLKNLNENVTLSGWVQTIRDKGFVVWIDLRDRYGITQLVLDEERTTKELL 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E AK +  E+V+   G V+ RS +  N  I TG+IE+  +++ IL+ ++  P  +  E +
Sbjct: 61  EKAKKLGREFVIQAKGKVIERSNK--NPKIPTGEIEILVEELNILNESQLPPFTIEDETD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR  +   +V R+++   +R  +  + FIE  TP+L  S+PEGARD
Sbjct: 119 GGEELRMKYRYLDIRRTPVKNKLVFRSQMAQEVRNYLSNQGFIEVETPVLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DI+N  E +   + ++ +  +     F R+ + +A+++YG DKPD+R  ++ 
Sbjct: 238 EMAFVEQEDIMNVFEGMTTHLLKKVTGKDF--GTFPRMSFAEAMQKYGNDKPDIRFGMVF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             + E     +F++F +   V                 R   D + +W +    G  G+ 
Sbjct: 296 TELNEIVKGKDFKIFDEAELVVGINVEGC-----ANYTRKQIDELIDWVKRPQIGATGMV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ ++  E G +     V K     + + I  +   + GD    ++G      +  +  R
Sbjct: 351 WVKYQ--EDGTLT--SSVNKFYTEEDLKLIAGKFGAKAGDLMLIMSGTASTVRTQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +   LG+   + F   W++DFP  EW+EE ++    H+PFT P+     L  N     
Sbjct: 407 MELGNRLGLRKPDEFAPLWVIDFPLLEWDEETQRYHAMHHPFTSPKKEDLHLLENQADKA 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YDLV NG EI  G IR +   +  + F+ +G ++E  E +FG L  AF+ G PPHG
Sbjct: 467 RANAYDLVLNGNEIGGGSIRIYDRNLQSKMFNLLGFTEEEAEAQFGFLMNAFKYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+A G DR+V +L G + +R+   FP + +  D+++ +PS ++ EQL EL L++ 
Sbjct: 527 GLAFGFDRLVAILDGNEVIRDYIAFPKNNSGRDVMIDAPSNIAEEQLEELHLKLR 581


>gi|261838142|gb|ACX97908.1| aspartyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 577

 Score =  581 bits (1498), Expect = e-163,   Method: Composition-based stats.
 Identities = 221/591 (37%), Positives = 339/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYERALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKTRLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR  + ++    R+ +  + R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLSAYEIFKLRSEVALTARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+     + +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAIG--HHISKPFKRMPYKEAMENYGSDKPDLRFGLPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  + D Q GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILEKTDAQTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|332670527|ref|YP_004453535.1| aspartyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332339565|gb|AEE46148.1| aspartyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 591

 Score =  581 bits (1498), Expect = e-163,   Method: Composition-based stats.
 Identities = 234/601 (38%), Positives = 333/601 (55%), Gaps = 26/601 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    VG+ V L+GWV R R HGG+ F+D+RD  GI QVV   ++    +A  
Sbjct: 3   RTHHAGSLRAEHVGTTVTLTGWVDRRRDHGGVAFVDLRDASGIAQVVIRDEA----VAHG 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREYPE 122
           +R+E+VL + G V  R     N  + TG++E+ A ++ +L+ +  LP  V    +    E
Sbjct: 59  LRAEYVLQVTGEVGRRPEGNENPQLATGEVEVVAHEVVVLNESAPLPFQVSSSLDETVGE 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R K+R+LDLRR    + +  R +   + R  + A++F+E  TP LT S+PEGARDFLV
Sbjct: 119 EARLKHRYLDLRRPAPARALRLRAKASQAARAVLDAQDFVEVETPTLTRSTPEGARDFLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R++ GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMS
Sbjct: 179 PARLSPGSWYALPQSPQLFKQLLMVAGLERYYQIARCYRDEDFRADRQP-EFTQLDVEMS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDD++   E +L  ++        +     R+ + DA+ RYG+DKPDLR  + +  +
Sbjct: 238 FVEQDDVIALGEQILVALWRLV--DVEIPTPIRRMTFADAMARYGSDKPDLRFGLELVEL 295

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T++F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+   
Sbjct: 296 TDYFRETPFRVFQAP------YVGAVVQPGGASTPRRGFDAWQEWAKQRGAKGLAYVT-- 347

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + E G +   GPVAK++       +        GD+ FF AG   +  +    AR  I +
Sbjct: 348 VGEDGELG--GPVAKNITEAERAGLVAATGASPGDAIFFAAGPTSEARALLGAARLEIGR 405

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEE-------KKIDFAHNPFTMPQGGMESLKGNDLL 475
             G+I+   +EF W++D P ++   E+             H+ FT P          D  
Sbjct: 406 RGGLIDEKAWEFVWVVDAPLFKPTGEDDDVAVGGGAWTAVHHAFTSPTPQWIDTFEQDPG 465

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           +  A+ YD+VCNG EI  G IR H  +V  + F  +GI  E  + +FG L  AFQ G PP
Sbjct: 466 NALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFEVMGIGPEEAQEKFGFLLDAFQFGAPP 525

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G DRIV LL GA+++REV  FP S    D L  +P+ ++ EQ RE G+     P
Sbjct: 526 HGGIAFGWDRIVALLTGAESIREVIAFPKSGGGYDPLTAAPAPITPEQRREAGVDAKPKP 585

Query: 596 K 596
           K
Sbjct: 586 K 586


>gi|325972753|ref|YP_004248944.1| aspartyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324027991|gb|ADY14750.1| aspartyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 598

 Score =  581 bits (1498), Expect = e-163,   Method: Composition-based stats.
 Identities = 236/598 (39%), Positives = 340/598 (56%), Gaps = 12/598 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT +CG L  +D G  V L+GWVHR R HG + F+++RD YGITQVV + D++     +A
Sbjct: 9   RTTTCGALTKADNGKIVVLNGWVHRDRNHGALHFINLRDRYGITQVVVDDDASPALQAVA 68

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +  E+ + + G+V  R    +N  + TG+IE+ AQ IEILS    LP  +   +E  E
Sbjct: 69  SELHLEYCIAVTGIVRQRPDSMVNPEMSTGEIEVKAQSIEILSRCAPLPFQIDDGKETRE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   + + +  R   I + R  + + +F E  TP +  S+PEGARDFLV
Sbjct: 129 DLRLKYRYLDLRSQGMQQRLKLRHDFILACRKYLSSRDFYEIETPTMIKSTPEGARDFLV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  G FYALPQ+PQ +KQ+LM  G D+YFQIA C+RDED R DR   EF QLD+EMS
Sbjct: 189 PSRIYAGKFYALPQSPQLFKQILMVGGMDKYFQIARCYRDEDARGDRQL-EFTQLDVEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++DD+L+ ME +   VF E  N   +   F R+ Y+DA+  YG DKPDLR  + + +V
Sbjct: 248 FVKRDDVLSLMEGLFNSVFREVMNYE-LPARFRRLTYNDALNTYGCDKPDLRFDVPLCDV 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIP-AKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            E    S F  F  I++     +    P  +G   +R +   + + A+  G  GLA+I  
Sbjct: 307 NELAQKSSFATFKDIVANGGYVKALCAPKTEGVDFSRKYITELEDAAKVYGAQGLAWIKV 366

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHI 420
             ++    +  G V+K    +  E +  ++D ++GD   F+   +  K C+  +  R  +
Sbjct: 367 GENK----SLSGGVSKFFAGLEAE-LLAKVDAKEGDLILFVAHQNWKKCCASLSAVRTKL 421

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L +I    FEFCWI+DFP +E+NEE    + AH+ F+MPQ        +D  S+K  
Sbjct: 422 GRDLKLIRK-AFEFCWIIDFPLFEYNEEGGHWEAAHHMFSMPQAEYLDTLESDPGSVKGD 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+ASG IR H  E+  + F       +  E RFG L  AF+ G PPHGGIA
Sbjct: 481 LYDLVLNGYEVASGSIRIHDVELQKRIFRICNFDDKTAEERFGFLLNAFRYGPPPHGGIA 540

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
            G+DR+VM++    ++ EV  FP +      +  SPS V  +QL +L L I     K 
Sbjct: 541 PGVDRMVMIMSEQTSIHEVIAFPKNTAAVSPMDDSPSEVDQQQLDDLHLIINYPKPKA 598


>gi|161507425|ref|YP_001577379.1| aspartyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|160348414|gb|ABX27088.1| Aspartyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 617

 Score =  581 bits (1498), Expect = e-163,   Method: Composition-based stats.
 Identities = 222/608 (36%), Positives = 343/608 (56%), Gaps = 13/608 (2%)

Query: 1   MHR--YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-- 56
           M +   RT  CG++    +G  V L GWV RVR  G ++F+D+RD  GI Q+V N DS  
Sbjct: 1   MEKIEKRTDYCGNITEKYIGENVNLYGWVQRVRNLGNLVFIDLRDRAGIVQIVVNKDSGK 60

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +IA S+ +E+VL + G V+ RS   +N ++ TGQ+E+ A  I +L+ A+  P  +  
Sbjct: 61  KLMDIADSLGNEYVLQVKGKVVKRSE--VNPDMKTGQVEVDATDIIVLNKAKNPPFEIKN 118

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             E  E  R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEG
Sbjct: 119 GVEISEQTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEG 178

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q
Sbjct: 179 ARDYLVPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQ 237

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +DMEMSF ++  I +  E +L+ + ++    + +     RI + D++ +YG DKPD R  
Sbjct: 238 IDMEMSFADEKTIQDYTEGLLKKIMKDVKGID-LKTPIKRISWTDSMNKYGCDKPDTRYG 296

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           +++H+++  F  S+F+VFS  ++     +  A+       +R   D+  E+ +     GL
Sbjct: 297 MLIHDLSPIFKDSDFKVFSGAIADGGFVKGIAVKNGAKVYSRKKIDQKAEFIKRFHAKGL 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A++ +   E G  +  GPVA+ L   N EA++   D++ G+   FIA      C      
Sbjct: 357 AWVKF---EDGEFS--GPVARFLADENKEALKKEFDLEGGELVVFIADKWKVCCDSLNHL 411

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R   A+E  II    ++F W++D+P +E++E   +   AH+PFTMP      L   +   
Sbjct: 412 RREFAKETDIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHK 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG E+  G IR H   +    F  +G +++    +FG L  A   G PPH
Sbjct: 472 AHARSYDIVMNGDEMGGGSIRIHKRSIQEDMFKALGFTEKRAYEQFGYLLDALDMGFPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+A G+DR  M+L    N+R+V  FP + +  + +M +P+ V+ +QL +LG+ +    +
Sbjct: 532 AGLAIGLDRFAMMLADKDNIRDVLAFPKNASASEPMMHAPAPVADQQLNDLGIEVEAKYE 591

Query: 597 KILKISVT 604
             +K +  
Sbjct: 592 DSVKAAEK 599


>gi|15827171|ref|NP_301434.1| aspartyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221229649|ref|YP_002503065.1| aspartyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|549025|sp|P36429|SYD_MYCLE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Antigen T5;
           AltName: Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781743|sp|B8ZUJ3|SYD_MYCLB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3335328|gb|AAC27132.1|S82268_1 aspartyl-tRNA synthetase [Mycobacterium leprae]
 gi|581332|emb|CAA54735.1| aspartyl-tRNA synthetase [Mycobacterium leprae]
 gi|3136016|emb|CAA19094.1| aspartyl-tRNA synthetase [Mycobacterium leprae]
 gi|13092719|emb|CAC30009.1| aspartyl-tRNA synthetase [Mycobacterium leprae]
 gi|219932756|emb|CAR70594.1| aspartyl-tRNA synthetase [Mycobacterium leprae Br4923]
          Length = 589

 Score =  581 bits (1498), Expect = e-163,   Method: Composition-based stats.
 Identities = 228/601 (37%), Positives = 328/601 (54%), Gaps = 26/601 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H  G L  SD G  V L+GWV R R HGG+IF+D+RD  GITQ V   +      A  
Sbjct: 3   RSHGAGVLRKSDAGQQVTLAGWVSRRRDHGGVIFIDLRDSSGITQAVF-REPDVLAQAHR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V  R     NA I TG IE++A  + +L  +    LP   +    E +
Sbjct: 62  LRAEFCIAVSGVVEIRPEGNANAEIPTGDIEVNATSLTVLGESAP--LPFQLDEPAGEEL 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRRD     I  R+++  + R  +   +F+E  TP +T S+PEGARDFLVP+
Sbjct: 120 RLKYRYLDLRRDGPGSAIRLRSKVNATARAVLARHDFVEIETPTITRSTPEGARDFLVPA 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G+FYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV
Sbjct: 180 RLRPGTFYALPQSPQLFKQLLMVAGMERYYQIAHCYRDEDFRADRQP-EFTQLDMEMSFV 238

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +D++   E +L  ++        +     RI Y DA+RR+G+DKPDLR  + +   TE
Sbjct: 239 DAEDVIAISEEILTELWMLIG--YHIPAPIPRISYADAMRRFGSDKPDLRFGLELVECTE 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRVF         Y    +   G    R   D   +WA+ +G  GLAY+   + 
Sbjct: 297 FFCDTTFRVFQAP------YVGAVVMPGGAAQPRRTLDEWQDWAKQRGHRGLAYVL--VT 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G +   GPVAK+ +      +   +  + GD  FF AG      +    AR  IA  L
Sbjct: 349 DDGTLG--GPVAKNFSDAERSRLASHVGAEPGDCIFFSAGPAKSSRALLGAARGEIANRL 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDL 474
           G+I+   + F W++D P +E  +E                 H+ FT P+   E    +D 
Sbjct: 407 GLIDPEAWAFVWVVDPPLFERADEATKVGEMAVGSGAWTAVHHAFTSPKPEFEDSIESDP 466

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S+ A  YD+VCNG EI SG +R +  ++  + F+ +G+ K   E +FG L  AF  G P
Sbjct: 467 GSVLADAYDIVCNGHEIGSGSVRINRRDIQERVFAVMGLEKAEAEEKFGFLLEAFTFGAP 526

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DR   LL G +++REV  FP +    D L  +P++++ +Q +E G+     
Sbjct: 527 PHGGIAFGWDRTNALLAGMESIREVIAFPKTGGGVDPLTDAPASITAQQRKESGIDTKPK 586

Query: 595 P 595
            
Sbjct: 587 E 587


>gi|317179021|dbj|BAJ56809.1| aspartyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 577

 Score =  581 bits (1498), Expect = e-163,   Method: Composition-based stats.
 Identities = 219/591 (37%), Positives = 337/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKTRLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+     + +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAIG--HNISKPFKRMPYKEAMENYGSDKPDLRFGLHLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GVKGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|260101664|ref|ZP_05751901.1| aspartate-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260084524|gb|EEW68644.1| aspartate-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|328467648|gb|EGF38703.1| aspartyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 617

 Score =  581 bits (1498), Expect = e-163,   Method: Composition-based stats.
 Identities = 223/608 (36%), Positives = 343/608 (56%), Gaps = 13/608 (2%)

Query: 1   MHR--YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-- 56
           M +   RT  CG++    +G  V L GWV RVR  G ++F+D+RD  GI Q+V N DS  
Sbjct: 1   MEKIEKRTDYCGNITEKYIGENVNLYGWVQRVRNLGNLVFIDLRDRAGIVQIVVNKDSGK 60

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +IA S+ +E+VL + G V+ RS   +N ++ TGQ+E+ A  I +L+ A+  P  +  
Sbjct: 61  KLMDIADSLGNEYVLQVKGKVVKRSE--VNPDMKTGQVEVDATDIIVLNKAKNPPFEIKN 118

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             E  E  R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEG
Sbjct: 119 GVEISEQTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEG 178

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q
Sbjct: 179 ARDYLVPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQ 237

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +DMEMSF ++  I +  E +L+ + ++    + +     RI + D++ +YG DKPD R  
Sbjct: 238 IDMEMSFADEKTIQDYTEGLLKKIMKDVKGID-LKTPIKRISWTDSMNKYGCDKPDTRYG 296

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           +++H+++  F  S+F+VFS  ++     +  A+       +R   D+  E+ +     GL
Sbjct: 297 MLIHDLSPIFKDSDFKVFSGAIADGGFVKGIAVKNGAEVYSRKKIDQKAEFIKRFHAKGL 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A++ +   E G  +  GPVA+ L   N EA++   D++ G+   FIA      C      
Sbjct: 357 AWVKF---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFIADKWKVCCDSLNHL 411

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R   A+E  II    ++F WI+D+P +E++E   +   AH+PFTMP      L   +   
Sbjct: 412 RREFAKETDIIPKGVYDFVWIVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHK 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG E+  G IR H   +    F  +G +++    +FG L  A   G PPH
Sbjct: 472 AHARSYDIVMNGDEMGGGSIRIHKRSIQEDMFKALGFTEKRAYEQFGYLLDALDMGFPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+A G+DR  M+L    N+R+V  FP + +  + +M +P+ V+ +QL +LG+ +    +
Sbjct: 532 AGLAIGLDRFAMMLADKDNIRDVLAFPKNASASEPMMHAPAPVADQQLNDLGIEVEAKYE 591

Query: 597 KILKISVT 604
             +K +  
Sbjct: 592 DSVKAAEK 599


>gi|97196794|sp|Q46I98|SYD_PROMT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 606

 Score =  581 bits (1498), Expect = e-163,   Method: Composition-based stats.
 Identities = 228/601 (37%), Positives = 340/601 (56%), Gaps = 20/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           R  +CG+L  S + + V+L GWV R R HGG+IF+D+RD  G  Q+  +PD     F IA
Sbjct: 2   RNKTCGELRASAISANVQLCGWVDRRRDHGGVIFIDLRDRSGTIQITVDPDQGQDLFSIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV---AEELPLPVFGERE 119
           +S+R+E VL I+GLV +R  E IN  I TG++E+ A+ I+IL+         + +  E  
Sbjct: 62  ESLRNETVLQINGLVRARPDEAINTKIPTGEVEVLAKNIKILNTVTSTLPFSVSIHDEES 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR K+R+LDLRR+ ++ N+  R   + + R  +  E FIE  TPILT S+PEGARD
Sbjct: 122 VKEEIRLKHRYLDLRRERMNNNLRLRHNTVKAARSFLENEGFIEVETPILTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV  G F+ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YLVPSRVCGGEFFALPQSPQLFKQLLMVGGVERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+E+ +I+   E ++  ++++    + +   F R+ + +A+ R+GTD+PD R  + +
Sbjct: 241 EMSFMEEKEIIELNEKLIVSIWKKIKGID-LQTPFPRMTWQEAMDRFGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
            N ++ F  S F+VFS  +S     +   I       +         +   A+  G  GL
Sbjct: 300 VNTSDLFSKSGFKVFSNAISSGGCVKCITIEDGNNLISNVRIKPGGDIFSEAQKAGAGGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  R+ +   V  +G +  +L     + + ++   + GD   F AG            
Sbjct: 360 AFI--RVRDDKEVDTIGAIKDNLTTSQIKELLLKTQAKPGDLILFGAGPTNIVNRTLDRV 417

Query: 417 RNHIAQELGIINCNC----FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM----ES 468
           R  IA++L II+ N     + F W+ DFP +E+N +E +++  H+PF  P+       ES
Sbjct: 418 RQFIAKDLKIISDNELKTQWNFLWVTDFPMFEFNSDENRLEAIHHPFCAPKPEDIGESES 477

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           L  + L +  A  YDLV NG EI  G +R H SE+       +G+SK   E +FG L  A
Sbjct: 478 LWKDKLPNSNAQAYDLVLNGLEIGGGSLRIHNSELQKTVLEVIGLSKNEAEEQFGFLIDA 537

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
              G PPHGGIA G+DRIVMLL    ++R+   FP +Q     +  +P+ V  +QL +L 
Sbjct: 538 LAMGAPPHGGIAFGLDRIVMLLANEDSIRDTIAFPKTQQARCSMAKAPANVENKQLEDLH 597

Query: 589 L 589
           +
Sbjct: 598 I 598


>gi|307637304|gb|ADN79754.1| Aspartyl-tRNA synthetase/Aspartyl-tRNA(Asn) synthetase
           [Helicobacter pylori 908]
          Length = 577

 Score =  581 bits (1498), Expect = e-163,   Method: Composition-based stats.
 Identities = 223/591 (37%), Positives = 343/591 (58%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKIIKVAGWGNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R A   N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKHVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+     +T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQAIFKAIG--HTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E       GP+ K L+    ++I  + D+Q GD  FF AGD      +    R  +A+
Sbjct: 358 ENE-----VKGPLVKFLSEKGLKSILEKTDVQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|293373057|ref|ZP_06619425.1| aspartate--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292631943|gb|EFF50553.1| aspartate--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 611

 Score =  581 bits (1498), Expect = e-163,   Method: Composition-based stats.
 Identities = 225/599 (37%), Positives = 335/599 (55%), Gaps = 18/599 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF-- 59
           + +RTH+CG+L +SDV   V LSGWV R R  GG+ F+D+RD YGITQ+V N +      
Sbjct: 24  YMFRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELC 83

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A  +  E+V+ + G V  R ++  NANI TG IE+   ++ +L+ A   P  +    +
Sbjct: 84  ERANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTD 141

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + IR KYR+LDLRR+ +  N+  R R+   +R  + +  FIE  TP+L  S+PEGARD
Sbjct: 142 GGDDIRMKYRYLDLRRNAVRSNLELRHRMTIEVRKYLDSLGFIEVETPVLIGSTPEGARD 201

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D 
Sbjct: 202 FVVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDC 260

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVEQ+DI+ T E + + +F+       ++  F R+ + DA++ YG+DKPDLR  +  
Sbjct: 261 EMSFVEQEDIITTFEGMAKHLFKTLRGVE-LAEPFQRMSWADAMKYYGSDKPDLRFGMKF 319

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLA 357
             + +      F VF     V                 R   D + ++ +    G  G+ 
Sbjct: 320 VELMDIMKGHGFSVFDNAAYVGG-----ICAEGAATYTRKQLDALTDFVKKPQIGAKGMV 374

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADA 416
           Y   R++  G V     V K       + ++     + GD    ++GD + K      + 
Sbjct: 375 YA--RVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCEL 430

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     +   D  +
Sbjct: 431 RLEMGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAA 490

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A  YD+V NG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPH
Sbjct: 491 VRADAYDMVVNGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAQAQFGFLMNAFKYGAPPH 550

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L +    
Sbjct: 551 GGLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQTQLDELNLIVDLKE 609


>gi|323466685|gb|ADX70372.1| Aspartyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 617

 Score =  581 bits (1498), Expect = e-163,   Method: Composition-based stats.
 Identities = 221/608 (36%), Positives = 342/608 (56%), Gaps = 13/608 (2%)

Query: 1   MHR--YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-- 56
           M +   RT  CG++    +G  V L GWV RVR  G ++F+D+RD  GI Q++ N DS  
Sbjct: 1   MEKIEKRTDYCGNITEKYIGENVNLYGWVQRVRNLGNLVFIDLRDRAGIVQIIVNKDSGK 60

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +IA S+ +E+VL + G V+ RS   +N ++ TGQ+E+ A  I +L+ A+  P  +  
Sbjct: 61  KLMDIADSLGNEYVLQVKGKVVKRSE--VNPDMKTGQVEVDATDIIVLNKAKNPPFEIKN 118

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             E  E  R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEG
Sbjct: 119 GVEISEQTRLKYRYLDLRRPEVQQAIILRSKILRATYEFFDENGFIDIETPILGKSSPEG 178

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q
Sbjct: 179 ARDYLVPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQ 237

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +DMEMSF ++  I +  E +L+ + ++      +     RI + D++ +YG DKPD R  
Sbjct: 238 IDMEMSFADEKTIQDYTEGLLKKIMKDV-KSIDLKTPIKRISWTDSMNKYGCDKPDTRYG 296

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           +++H+++  F  S+F+VFS  ++     +  A+       +R   D+  E+ +     GL
Sbjct: 297 MLIHDLSPIFKDSDFKVFSGAIADGGFVKGIAVKNGAKVYSRKKIDQKAEFIKRFHAKGL 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A++ +   E G  +  GPVA+ L   N EA++   D++ G+   FIA      C      
Sbjct: 357 AWVKF---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFIADKWKVCCDSLNHL 411

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R   A+E  II    ++F W++D+P +E++E   +   AH+PFTMP      L   +   
Sbjct: 412 RREFAKETDIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHK 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG E+  G IR H   +    F  +G +++    +FG L  A   G PPH
Sbjct: 472 AHARSYDIVMNGDEMGGGSIRIHKRSIQEDMFKALGFTEKRAYEQFGYLLDALDMGFPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+A G+DR  M+L    N+R+V  FP + +  + +M +P+ V+ +QL +LG+ +    +
Sbjct: 532 AGLAIGLDRFAMMLADKDNIRDVLAFPKNASASEPMMHAPAPVADQQLNDLGIEVEAKYE 591

Query: 597 KILKISVT 604
             +K +  
Sbjct: 592 DSVKAAEK 599


>gi|154149426|ref|YP_001405899.1| aspartyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|166225334|sp|A7I058|SYD_CAMHC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|153805435|gb|ABS52442.1| aspartyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 584

 Score =  581 bits (1498), Expect = e-163,   Method: Composition-based stats.
 Identities = 232/597 (38%), Positives = 333/597 (55%), Gaps = 18/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ C +L   D+G  V + GWV+  R HGG+IF+D+RD  G+ Q+V +P      + IA
Sbjct: 2   RSNYCTELDSGDIGKIVDVCGWVNSYRDHGGVIFIDLRDRSGLIQLVCDPKHSQEAYTIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR E+VL   G + +R  + IN  + TG+IE+  + + + + ++ LP  V G++   E
Sbjct: 62  NSVRDEFVLRAHGKIRARGKDLINPKLKTGEIEVVVENLIVENPSKPLPF-VIGDKNVSE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYRFLDLR +        R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ETRLKYRFLDLRTNENFNKFFTRSKAAIAARNALDRLGFVEVETPILTRATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLM S FD+YFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVYNGQFYALPQSPQLFKQLLMCSCFDKYFQIARCFRDEDLRADRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +Q D++   E VL+ +F+       +   F  + Y DA+  YG+DKPDLR  +   +V
Sbjct: 240 FCDQKDVMKVGEAVLKDIFKSCGKD--IKTPFRVMQYKDAMENYGSDKPDLRFGMKFIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG--GGNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        V AI  +GG    ++    R  E+ R  G  GLA+I 
Sbjct: 298 ADIFEKSSNEIFANIAKDKKKNRVKAIKVEGGDLKFSKRQMQRFEEYVRKFGAQGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            +          GP+ K       + +  R +++ GD  FF AG       +    R  +
Sbjct: 358 VK-----EEGLKGPLVKFFEKSEIDELVKRCELKVGDVVFFGAGKKKIVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A EL +IN +  EF W++DFP +E NE+       H+PFTMP    E     D+  I + 
Sbjct: 413 ANELELINPDALEFLWVVDFPMFEQNED-GTYSAMHHPFTMPNNVDE----PDIEEITSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  ++  + F  + I       +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGIELGGGSIRIHKEDIQEKVFKLLKIEPAEQREKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G DR++ML+  + ++R+V  FP +Q    LL  +PS +S EQLRELGL+I +  +K
Sbjct: 528 IGFDRLMMLVTRSSSIRDVIAFPKTQRAQCLLTKAPSGISNEQLRELGLKINKKEQK 584


>gi|326692514|ref|ZP_08229519.1| aspartyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 589

 Score =  581 bits (1498), Expect = e-163,   Method: Composition-based stats.
 Identities = 216/593 (36%), Positives = 326/593 (54%), Gaps = 12/593 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEI 61
             RT   G +    +G  V LSGWV + R  G +IF+D+RD  GI Q+  N    A   +
Sbjct: 1   MKRTTYAGLIDEKYLGQTVTLSGWVQKRRDFGDLIFVDLRDREGIVQLTFNATHPAALAV 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++R+E+V+ + G V+ R A  +N  I +G++E+   + EIL+ ++  P  +       
Sbjct: 61  AEAMRNEYVIAVTGTVIDREASQVNNKIHSGKVEIDVTEAEILATSKTPPFYIEDGVNAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E ++ +YR+LDLRR  + KN+  R++I++S    M   +FI   TPIL  S+PEGARD+L
Sbjct: 121 EELKLQYRYLDLRRPEMQKNLRIRSKIMSSAMKFMDDNDFINIETPILAKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  GSFYALPQ+PQ +KQLLM +GFDRYFQIA  FRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRIFPGSFYALPQSPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQP-EFTQMDLET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+  D+I   +   ++ +  +    +  +     + +++A+ R+GTDKPDLR P  + +
Sbjct: 240 SFMSADEIRALVNEWVKTMMHDVIGYDLDTATIQTLTWEEAMTRFGTDKPDLRIPYELKD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E    SEF VF+  +      +  A+P      +R   D++ ++    G  GLA++  
Sbjct: 300 LSETVKDSEFGVFANAVKDGGVVKAIAVPGGAAHYSRKDIDKLAQYIERFGAKGLAWLKV 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK     +  A+      ++GD   F AG      +     R   A
Sbjct: 360 TAD-----GISGPIAKFFPEAD--ALLAATGAKEGDLLLFGAGRADVVAATLDYLRRQTA 412

Query: 422 QELGIIN-CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           Q+L +I+  N + F WI+D+P +E++EE  +   AH+PFTMP            D     
Sbjct: 413 QDLDLIDQDNPWAFAWIVDWPLFEYSEEFNRWIAAHHPFTMPNEADLHYLDEGEDPHQAH 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+ SG IR H  +V  +    +G + E     FG L    + G PP GG
Sbjct: 473 AQSYDLVLNGYELGSGSIRIHRMDVQEKMLKALGFTPEAAHEAFGFLLEGMEYGFPPMGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IA G+DR+ MLL G  N+REV  FP +    + +  +P+ V  +QL +LGL +
Sbjct: 533 IALGLDRLAMLLAGQDNIREVIAFPKNSRATEPMTEAPTRVDGKQLNDLGLIV 585


>gi|149278258|ref|ZP_01884396.1| aspartyl-tRNA synthetase [Pedobacter sp. BAL39]
 gi|149231024|gb|EDM36405.1| aspartyl-tRNA synthetase [Pedobacter sp. BAL39]
          Length = 581

 Score =  581 bits (1497), Expect = e-163,   Method: Composition-based stats.
 Identities = 225/588 (38%), Positives = 334/588 (56%), Gaps = 14/588 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT +CG L + ++G  V L GWV + R  GG+ F+DIRD YGITQ+V N D      E A
Sbjct: 3   RTTTCGALTIENLGENVVLCGWVQKSRDLGGMTFIDIRDRYGITQLVFNMDDNRDLCEAA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++  E+V+   G V+ RS +  N  + TG++E+    +E+L+ A+  P  +  + +  +
Sbjct: 63  RNLGREFVIKASGTVVERSNK--NLKMPTGEVEIKITALEVLNAAKLPPFMIEDDTDGGD 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR+ L  N+V R R+  S+R  +   +FIE  TP+L  S+PEGARDF+V
Sbjct: 121 DLRMKYRYLDLRRNPLRNNMVLRHRMAQSVRRYLDKLDFIEVETPVLIKSTPEGARDFVV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N+G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 181 PSRMNEGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+EQ+DILNT E ++R +F+E    +       R+ Y DA+R YG+DKPD R  +    +
Sbjct: 240 FIEQEDILNTFEGLIRTLFKEIKGIDLPEV--PRMQYADAMRFYGSDKPDTRFDMRFVEL 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     +F VF     V     +    A      R   D + ++ +         I+ R
Sbjct: 298 NDMVKGKDFPVFDNAELV-----IGINAAGCAAYTRKQVDELTDFIKRPQIGATGLIYMR 352

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E G++     V K  N    +     ++ + GD    +AG   K     ++ R  +  
Sbjct: 353 HNEDGSLK--SSVDKFYNEEELKKWSDAMNTKPGDLVLIMAGTQDKVRKQLSELRLEMGT 410

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            LG+ + N +   W++DFP  EW+EE ++    H+PFT P+    SL      +++A  Y
Sbjct: 411 RLGLRDKNTYSALWVLDFPLLEWDEETERYHAMHHPFTSPKPEDISLLDTAPGAVRANAY 470

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG EI  G IR H   +    F ++G S E  + +FG L  AF+ G PPHGGIA G
Sbjct: 471 DMVVNGTEIGGGSIRIHDRTLQALMFKHLGFSPEEAQKQFGFLMDAFEFGAPPHGGIAFG 530

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            DR+  +  G  ++R+V  FP + +  D+++ SPS +  +QL EL ++
Sbjct: 531 FDRLCSIFAGLDSIRDVIAFPKNNSGRDVMIDSPSAIDDKQLNELKIK 578


>gi|255691887|ref|ZP_05415562.1| aspartate--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260622440|gb|EEX45311.1| aspartate--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 585

 Score =  581 bits (1497), Expect = e-163,   Method: Composition-based stats.
 Identities = 226/598 (37%), Positives = 332/598 (55%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            +RTH+CG+L +SD    V LSGWV R R  GG+ F+D+RD YGITQ+V N +      E
Sbjct: 1   MFRTHTCGELRISDANKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ I G V  R ++  NANI TG IE+   ++ +L+ A   P  +    + 
Sbjct: 61  RANKLGREFVIQITGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR+ +  N+  R ++   +R  + +  FIE  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI+ T E + + +F+       ++  F R+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDIITTFEGMAKHLFKTLRGVE-LTEPFPRMAWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     +                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDIMKGHGFSVFDNAAYIGG-----ICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  G V     V K       + ++     + GD    ++GD   K      + R
Sbjct: 352 A--RIEADGTVK--SSVDKFYTQEVLQKMKEAFGAKPGDLILILSGDDAMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     L   D  ++
Sbjct: 408 LEMGSQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H +++  + F  +G + E  E +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVVNGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAEAQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L +    
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQTQLDELNLIVDIKE 585


>gi|288574557|ref|ZP_06392914.1| aspartyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570298|gb|EFC91855.1| aspartyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 599

 Score =  581 bits (1497), Expect = e-163,   Method: Composition-based stats.
 Identities = 230/597 (38%), Positives = 337/597 (56%), Gaps = 13/597 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EI 61
            R+  CG +  S  G  V ++GWV + R  GGIIF+++ DH G  QVV NP+      + 
Sbjct: 11  KRSVFCGSVNGSHEGQVVTVNGWVRKRRDLGGIIFIELWDHTGTVQVVFNPELCPEPHDR 70

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-Y 120
           AK++RSE+V+ + G V  R   T N ++ TG+ E+      +L+ A+ LP  V    +  
Sbjct: 71  AKALRSEFVVAVKGSVRVRPDGTCNDDMATGRWEIMVDDFVLLAPAKPLPFEVGEGTDGV 130

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E++R  YR+LDLRR+ + +N+  R  +    R  +    F E  TP+LT S+PEGARD+
Sbjct: 131 DENLRLSYRYLDLRRNRMQRNLRVRHDVARYTREFLSDRGFCEVETPVLTKSTPEGARDY 190

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRVN GSF+ALPQ+PQ +KQ+LM SG DRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 191 LVPSRVNPGSFFALPQSPQIFKQILMISGMDRYFQIAKCFRDEDLRADRQP-EFTQVDIE 249

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF+ ++DI   ME  + G+F++      +   FLR+ Y +A+ R+G+DKPDLR P  + 
Sbjct: 250 LSFLTEEDIYEMMEAYMVGLFKDGLGVE-LQTPFLRMPYREAMDRFGSDKPDLRIPFEIV 308

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++ + F    F+ F ++L          +P  G   +R   +++ E  ++ G P +AY  
Sbjct: 309 DLGDVFADGGFKPFEELLKRGGYVRGVVLP-GGASLSRRLIEQVCERGKALGAPEMAYFQ 367

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNH 419
           ++     N    GP+AK L+      +       DGD  + +   D    CS     R  
Sbjct: 368 FK-----NGGVKGPLAKFLSDAKQADLGRISGASDGDVLYVMGHEDWSLVCSVLGQIRLE 422

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+E G +  + +EF W+ +FP +EW+EEEK+    H+PFTMP             S+++
Sbjct: 423 IAKEHGHVK-DSWEFLWVTEFPLFEWDEEEKRWTSVHHPFTMPMVEDLPFMDRAPGSVRS 481

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG E+  G IR H   +  + F  +G S+     RFG L  A   G PPHGGI
Sbjct: 482 RAYDLVLNGNEVGGGSIRIHDPAIQSEVFGCLGFSENQARERFGFLLDALSYGTPPHGGI 541

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G DR+VMLL G+ ++REV  FP +     L+ G+PS V + Q+ EL ++    PK
Sbjct: 542 ALGFDRLVMLLTGSNSIREVMAFPKTAKAQSLMSGAPSEVGITQMEELHIKSTFVPK 598


>gi|222617760|gb|EEE53892.1| hypothetical protein OsJ_00416 [Oryza sativa Japonica Group]
          Length = 675

 Score =  581 bits (1497), Expect = e-163,   Method: Composition-based stats.
 Identities = 226/596 (37%), Positives = 338/596 (56%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R   CG+LG  D G  VRL GWV   R H G+ FL +RD  G  QV   P+    + +  
Sbjct: 88  RDALCGELGAGDAGRRVRLCGWVALHRAHAGLTFLTLRDRSGTVQVTTLPEYPEVYAVVN 147

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFG--ER 118
            +R E V+ ++G+V SR  E IN ++ TG IE++A  I +L+    +   P+      + 
Sbjct: 148 KLRVESVVAVEGVVRSRPTEAINTDMKTGAIEVAADNIYVLNSVTRSLPFPITTADTVKE 207

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGA 177
           ++PE IR ++R LDLRR  +  N+  R  ++  +R  +   + F+E  TP+L+ S+PEGA
Sbjct: 208 KFPEEIRLRFRVLDLRRPQMQSNLRLRHNVVKHIRRYLEDRHDFVEIETPVLSKSTPEGA 267

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV  G FYALPQ+PQ +KQ+LM SGF++Y+QIA CFRDED R+DR P EF QL
Sbjct: 268 RDYLVPSRVQPGMFYALPQSPQLFKQMLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQL 326

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DME++F   +D+L   E ++R +F+E  +   + N F R+ Y +A+ RYGTD+PDLR   
Sbjct: 327 DMEIAFTSMEDMLKLNEELMRHIFQEVGDIK-LPNPFPRLTYTEAMNRYGTDRPDLRFDW 385

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW--ARSQGQPG 355
            + +V++ F+ S F++F+  L      +   +P      +     +   +  A   G  G
Sbjct: 386 QLKDVSDAFLGSSFKIFADTLENGGVIKALCVPGGAKEFSNTDLKKGTVYTEASKAGAKG 445

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L ++  ++ ++G + G+GP+   L     E +   LD + GD   F  G+          
Sbjct: 446 LPFL--KVMDNGELEGIGPLVASLKPEKKEQLLKHLDAKSGDLILFALGEQSAANRILGR 503

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  IA +L +I+ +     W+ DFP +EWN +E++ +  H+PFT P         NDL 
Sbjct: 504 LRLFIAHKLEVIDTSAHSILWVTDFPMFEWNSDEQRYEALHHPFTAPNPEDM----NDLP 559

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           S +A  YD++ NG EI  G +R + S+V  + F  +GIS E  E +FG L   F  G PP
Sbjct: 560 SARALAYDMIYNGVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDMGAPP 619

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGGIA G+DR+VMLL G  ++R+V  FP +      L  +PS V  +QL++LG R 
Sbjct: 620 HGGIAYGLDRLVMLLAGENSIRDVIAFPKTTTAQCSLTKAPSPVDPQQLKDLGFRT 675


>gi|168334873|ref|ZP_02692995.1| aspartyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 687

 Score =  581 bits (1497), Expect = e-163,   Method: Composition-based stats.
 Identities = 230/601 (38%), Positives = 345/601 (57%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG++  S++ S V++ GWV+  R  GGIIF+D+ D  G  Q+V + +     F+I 
Sbjct: 3   RTHYCGNIRESNMKSSVKVCGWVNTKRDMGGIIFIDLHDREGTLQIVCDLEMLKDKFKII 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++V+++ VL + G +  R  ETIN  I TG +EL A+   +LS A    LP   + E  E
Sbjct: 63  EAVKNQSVLQVRGKIRLRDDETINPKIATGTVELYAEDCRLLSEASP--LPFSLDEEVRE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLD+RR+ +  N+  R +I    +  +  + FI   TP+LT S+PEGARD+LV
Sbjct: 121 DLRLKYRFLDIRREAMISNLKFRHKIQKLTQDYLDNDGFISVETPMLTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  G D+Y+QIA CFRDED R+DR P EF Q+DMEMS
Sbjct: 181 PSRVHPGEFYALPQSPQIFKQLLMVGGLDKYYQIARCFRDEDLRADRQP-EFTQVDMEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQ+D+L  +E + + +F+   N     + F RI +  A+ +YG+DKPDLR  + + ++
Sbjct: 240 FVEQEDVLRHLEKLFKYIFKHSMNIEF-DDRFPRITWKTAMDKYGSDKPDLRFDLPIVDI 298

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE     EF VF  ++          I   G   +R+  D + + A + G  G+A+I  R
Sbjct: 299 TEVARVCEFSVFRNVVDQGGVVRAICIK-GGDVLSRSQIDELTKTAVTFGAKGMAWISLR 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D          + K+ N  + +AI  + + ++GD   F A             R  IA 
Sbjct: 358 PDG----EIYSILKKYFNESDIQAIIEKTEAKNGDFILFCADKLDIVRKVLGVLRLEIAD 413

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              +   + ++  ++ DFP +E++EEE +    H+PFTMP     SL   D  +++A  Y
Sbjct: 414 IFNLRRKDDYKILFVTDFPQFEYSEEEGRYLAMHHPFTMPYLEDISLIETDKGAVRAQAY 473

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+ SG +R + +++  + F  +G S E ++ RFG +  AF+ G PPH G A G
Sbjct: 474 DVVLNGVELGSGSVRIYDADIQQKMFXALGFSDEEIKERFGFMVDAFKYGTPPHAGFAFG 533

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP---KKIL 599
           +DR+VMLL+GA ++REV  FP +++   L+  +P+ V  EQL  L L +       KK  
Sbjct: 534 LDRLVMLLVGANSLREVIAFPKTKDASCLMTNAPNLVDDEQLEVLNLGLYTAEGIVKKKA 593

Query: 600 K 600
           K
Sbjct: 594 K 594


>gi|289178445|gb|ADC85691.1| Aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 643

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 225/610 (36%), Positives = 344/610 (56%), Gaps = 33/610 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   D+    VG  V L+GWV R R HGG+ F+D+RD+ G+ QVV N +    E+A+
Sbjct: 50  YRTHHATDVTEVLVGEHVTLAGWVDRRRDHGGVAFIDLRDNTGLVQVVINEE----EMAR 105

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFG 116
            +RSE+V+ +DG V  R     N ++ TG++E+ A+KI +L+ ++ LP            
Sbjct: 106 PLRSEYVIEVDGKVRQRPEGNENDHLATGKVEVVAEKIRVLAKSDALPFQVSTALENESE 165

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR  + +NI  R+ ++ + R  +    F E  TP +  S+PEG
Sbjct: 166 NKLPGEDVRLKYRYLDLRRPAMQRNIKLRSDMMRAARTELDKLGFTEVETPTMIKSTPEG 225

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM +G +RY+Q A C+RDED R+DR P EF Q
Sbjct: 226 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVAGVERYYQFARCYRDEDFRADRQP-EFTQ 284

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEMSFV+Q+D++   E V++ +++  ++G  +     RI + +A+ +YG+DKPDLR  
Sbjct: 285 LDMEMSFVDQEDVIAMAEQVIKAIWK--ADGYDIETPIRRIPWQEAMDKYGSDKPDLRFG 342

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +T++F ++ FRVF         Y    +   G    R   D   +WA+ +G  GL
Sbjct: 343 NELIELTDYFKNTPFRVFQAP------YVGAVLFKGGASTPRRQFDAWQDWAKQRGAKGL 396

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E+G +   GPVAK+L+      ++  +  +DGD+ FF AG            
Sbjct: 397 AYVVF--GENGELK--GPVAKNLSGEERNGLKEAVGAEDGDAVFFAAGARESSQLLLGAV 452

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A   G+++   F FCW++DFP ++  ++           K    H+PFTMP     
Sbjct: 453 RVELANRAGLLDPKKFAFCWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWI 512

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H  ++  +  + +GI+ +  +++FG L  
Sbjct: 513 DTFDEDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVLGITPQEAQDKFGFLLE 572

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH GIA G DR V LL GA ++R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 573 AFKYGAPPHAGIALGWDRTVALLAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAET 632

Query: 588 GLRIVENPKK 597
           G+       +
Sbjct: 633 GVDYDPEEDE 642


>gi|72383128|ref|YP_292483.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|72002978|gb|AAZ58780.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 612

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 228/604 (37%), Positives = 341/604 (56%), Gaps = 20/604 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACF 59
           +  R  +CG+L  S + + V+L GWV R R HGG+IF+D+RD  G  Q+  +PD     F
Sbjct: 5   NFMRNKTCGELRASAISANVQLCGWVDRRRDHGGVIFIDLRDRSGTIQITVDPDQGQDLF 64

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV---AEELPLPVFG 116
            IA+S+R+E VL I+GLV +R  E IN  I TG++E+ A+ I+IL+         + +  
Sbjct: 65  SIAESLRNETVLQINGLVRARPDEAINTKIPTGEVEVLAKNIKILNTVTSTLPFSVSIHD 124

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           E    E IR K+R+LDLRR+ ++ N+  R   + + R  +  E FIE  TPILT S+PEG
Sbjct: 125 EESVKEEIRLKHRYLDLRRERMNNNLRLRHNTVKAARSFLENEGFIEVETPILTRSTPEG 184

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSRV  G F+ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF Q
Sbjct: 185 ARDYLVPSRVCGGEFFALPQSPQLFKQLLMVGGVERYYQVARCFRDEDLRADRQP-EFTQ 243

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+EMSF+E+ +I+   E ++  ++++    + +   F R+ + +A+ R+GTD+PD R  
Sbjct: 244 LDIEMSFMEEKEIIELNEKLIVSIWKKIKGID-LQTPFPRMTWQEAMDRFGTDRPDTRYG 302

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQ 353
           + + N ++ F  S F+VFS  +S     +   I       +         +   A+  G 
Sbjct: 303 MELVNTSDLFSKSGFKVFSNAISSGGCVKCITIEDGNNLISNVRIKPGGDIFSEAQKAGA 362

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLA+I  R+ +   V  +G +  +L     + + ++   + GD   F AG         
Sbjct: 363 GGLAFI--RVRDDKEVDTIGAIKDNLTTSQIKELLLKTQAKPGDLILFGAGPTNIVNRTL 420

Query: 414 ADARNHIAQELGIINCNC----FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM--- 466
              R  IA++L II+ N     + F W+ DFP +E+N +E +++  H+PF  P+      
Sbjct: 421 DRVRQFIAKDLKIISDNELKTQWNFLWVTDFPMFEFNSDENRLEAIHHPFCAPKPEDIGE 480

Query: 467 -ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
            ESL  + L +  A  YDLV NG EI  G +R H SE+       +G+SK   E +FG L
Sbjct: 481 SESLWKDKLPNSNAQAYDLVLNGLEIGGGSLRIHNSELQKTVLEVIGLSKNEAEEQFGFL 540

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             A   G PPHGGIA G+DRIVMLL    ++R+   FP +Q     +  +P+ V  +QL 
Sbjct: 541 IDALAMGAPPHGGIAFGLDRIVMLLANEDSIRDTIAFPKTQQARCSMAKAPANVENKQLE 600

Query: 586 ELGL 589
           +L +
Sbjct: 601 DLHI 604


>gi|317009370|gb|ADU79950.1| aspartyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 577

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 220/591 (37%), Positives = 340/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S+ +E A  
Sbjct: 2   RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSSAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENHKLKTGKIEIVLEELVIENKSATPPIE-IGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR  + ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLSAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+     +T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQEIFKAIG--HTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F  S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFRDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|317177552|dbj|BAJ55341.1| aspartyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 577

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 220/591 (37%), Positives = 337/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYERALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+     + +S  F R+ Y +A+  YG+DKPDLR  + +  V E
Sbjct: 240 SENDVMGVVEDLLQEIFKAIG--HHISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGE 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|315586700|gb|ADU41081.1| aspartate--tRNA ligase [Helicobacter pylori 35A]
          Length = 577

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 219/591 (37%), Positives = 337/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+     + +   F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAIG--HNIFKPFKRMSYKEAMENYGSDKPDLRFGLPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAVFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  + D + GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILEKTDAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|325997490|gb|ADZ49698.1| Aspartyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 577

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 223/591 (37%), Positives = 342/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW    R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKIIKVAGWWKTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R A   N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKHVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+     +T+S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQAIFKAIG--HTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E       GP+ K L+    ++I  + D+Q GD  FF AGD      +    R  +A+
Sbjct: 358 ENE-----VKGPLVKFLSEKGLKSILEKTDVQVGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|317131289|ref|YP_004090603.1| aspartyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469268|gb|ADU25872.1| aspartyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 595

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 219/595 (36%), Positives = 325/595 (54%), Gaps = 13/595 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEI 61
            RT  C      D G  V + GW  + R  G ++F+D+RD  GI Q+  +  +  A  E 
Sbjct: 9   KRTDYCAAFSEKDAGREVVVCGWAAKRRDLGALLFIDLRDRSGILQLAFDDTTGRAVLEK 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A++VRSE+VL   G +  R  ET N  + TG+IE++  ++ IL+ ++  P  V       
Sbjct: 69  AQTVRSEFVLAAKGTIRLR--ETPNDKLPTGRIEMAVSELRILAKSDTPPFEVAEGGAVK 126

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E ++ +YR+LDLRR  +  ++  R RI+ +         FIE  TP L  S+PEGARD+L
Sbjct: 127 EEMQLRYRYLDLRRPEMQNHLFLRHRIVKAAHDYFDRNGFIEIETPNLIKSTPEGARDYL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++ G FYALPQ+PQ YKQ+LM SGFDRY QIA CFRDED R+DR P EF Q+D+E+
Sbjct: 187 VPSRLHAGKFYALPQSPQLYKQILMLSGFDRYMQIARCFRDEDLRADRQP-EFTQIDLEL 245

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++DI+   E  +R VF+E    + V   F R+ YD+A+ RYG+DKPD+R  + + +
Sbjct: 246 SFVDEEDIMALNEGYIRHVFKEVLGKD-VQTPFQRLPYDEAMARYGSDKPDVRFGMELRD 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E      F VF   L+                 +R   D++  + +  G  GLA++  
Sbjct: 305 LSETVKGCGFGVFEGALAGGGSVRAVTAEGGADNLSRKDLDKLAAFVKDYGAKGLAWLKL 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHI 420
                          K ++     A+        GD+   +A       C+     R H+
Sbjct: 365 ------GDTPNASFGKFVSEDTLLAVAAAAGAGPGDAVLIVADTNSTVACTALGALRLHL 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+  G+I  + F F W+  FP +E++EEE +    H+PFT P         +D  +  A 
Sbjct: 419 AERFGLIPKDEFAFLWVTHFPLFEYSEEEGRYMAMHHPFTAPTEESLDKLESDPGTCYAR 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR +   +  + F  +G+S +VV  RFG L  AF+ G PPHGG+A
Sbjct: 479 AYDMVLNGVELGGGSIRINDPALQKRMFKALGLSDDVVRQRFGFLTEAFRYGAPPHGGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+DR+VML+LG +++++V  FP  QN  +L+ GSP  V  +QLREL L  +   
Sbjct: 539 YGLDRLVMLMLGCESIKQVIAFPKVQNASELMTGSPDLVEEKQLRELHLSPIREK 593


>gi|283956054|ref|ZP_06373541.1| LOW QUALITY PROTEIN: aspartyl-tRNA synthetase [Campylobacter jejuni
           subsp. jejuni 1336]
 gi|283792374|gb|EFC31156.1| LOW QUALITY PROTEIN: aspartyl-tRNA synthetase [Campylobacter jejuni
           subsp. jejuni 1336]
          Length = 575

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 234/588 (39%), Positives = 340/588 (57%), Gaps = 18/588 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWV 70
           G+S VG  V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+      EIA + R+E+V
Sbjct: 2   GISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIASNARNEFV 61

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L  +G +  R    +N  + TG+IE+   K+ I + +  +P     +    E +R KYRF
Sbjct: 62  LIAEGAIRPRGEGLVNPKLKTGEIEVVVSKLTIENES-AVPPFAIADESVNEELRLKYRF 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LVPSRV+QG 
Sbjct: 121 LDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLVPSRVHQGE 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           FYALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMSF EQ D++
Sbjct: 181 FYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMSFCEQKDVI 239

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           N  E  L+ +F+       +   F ++ Y DA+  YG+DKPDLR  +   +V + F  S 
Sbjct: 240 NVAETFLKDIFKACGKE--IQTPFRQMQYKDAMENYGSDKPDLRFDLKFIDVIDIFAKSN 297

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
             +F+ I        + AI    G    ++    R  E+ R  G  GLA+I  + D    
Sbjct: 298 NEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQVKED---- 353

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
               GP+ K  +  +   +  R +++ GD  FF AG       +    R  +A EL +I+
Sbjct: 354 -GLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGRFRIFLANELNLID 412

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            N  EF W++DFP +E N++       H+PFTMP+     +   DL  I +  YD+V NG
Sbjct: 413 PNALEFLWVVDFPMFEQNDD-GSYSAMHHPFTMPKN----INEADLEEISSIAYDVVLNG 467

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
            E+  G IR H +++  + F  + I++E  + +FG L  A   G PPHGGIA G+DR++M
Sbjct: 468 VELGGGSIRIHKNDIQQKVFKLLNINEEQQKEKFGFLLDALSFGAPPHGGIAIGLDRLIM 527

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           L+ GA ++REV  FP +Q    L+  +PS  + E +RELG+++ EN K
Sbjct: 528 LVTGANSIREVIAFPKTQRAQCLMTDAPSPANNEAMRELGIKLRENIK 575


>gi|304415265|ref|ZP_07395962.1| aspartyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304282891|gb|EFL91357.1| aspartyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 640

 Score =  580 bits (1495), Expect = e-163,   Method: Composition-based stats.
 Identities = 215/603 (35%), Positives = 323/603 (53%), Gaps = 12/603 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT  CG L  S V   V L GW +R R  G  IF+D+RD  GI QV  + D +   + AK
Sbjct: 2   RTKYCGRLNFSHVNQEVTLCGWANRCRDLGRSIFIDVRDREGIVQVFFDQDQSLALDEAK 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G+V +R  + IN ++ TG++E+ A K+ I++ +    LP+       E 
Sbjct: 62  KLRNEFCIQITGIVRARDEDKINHDMPTGEVEVFATKLTIINASAP--LPLDNNHINSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I   +R  M  + F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMAQRLKTRAKITALVRRFMENQGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+QG FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED RSDR P EF Q       
Sbjct: 180 SRVHQGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRSDRQP-EFTQXXXXXXX 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
                + + ME ++  +++E    +     F  + +DDAIRR+G+DKPDLRNP+ + ++ 
Sbjct: 239 XXXKQLRDLMEQLICKLWKEIKGVD--LGTFQILSFDDAIRRFGSDKPDLRNPLELIDIA 296

Query: 304 EHFVHSEFRVFSKILSVNPGY---EVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +     E  +F+ +L+ N       V     +G    R   D   E  + +G  GL  + 
Sbjct: 297 DLVQGIELPIFADVLNPNSNITGRVVAICVTEGAQIGRKQIDEYTETIKQRGVNGLVCLK 356

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               ++G     G + K LN      I  R    +GD  F  AG            R  +
Sbjct: 357 VNDSQAGVAGVQGSIGKFLNADMLRNILQRTQANNGDMLFLAAGSFNTVTEAMGALRLQL 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +  +I  N ++  W++DFP +E N ++  +   H+PFT P+    +    +  +  A 
Sbjct: 417 GHDRKLIQPNSWQPLWLVDFPLFEKN-DQGGLSAMHHPFTSPKEMTSAELKANPTAAIAN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+E+  G +R H SE+  Q FS +GI +     +FG L  A + G PPH G+A
Sbjct: 476 AYDMVINGYEVGGGSVRIHCSEMQQQVFSLLGIEEAEQREKFGFLLDALKYGAPPHAGLA 535

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            G+DR+VMLL    N+R+V  FP +     L+  +PS  + + L EL ++   + KK  K
Sbjct: 536 FGLDRLVMLLTDCDNIRDVIAFPKTTAAACLMTEAPSFANPDVLAELSIKT--DNKKSKK 593

Query: 601 ISV 603
            + 
Sbjct: 594 TAA 596


>gi|317507127|ref|ZP_07964887.1| aspartyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254573|gb|EFV13883.1| aspartyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 599

 Score =  580 bits (1495), Expect = e-163,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 329/596 (55%), Gaps = 27/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L  S +G+ V L+GWV R R HGG+IF+D+RD  G+ QVV   D    E A +
Sbjct: 2   RTHLAGELRESHIGTDVALTGWVSRRRDHGGVIFVDLRDKSGLAQVVF-RDGDVLERAHA 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ L I+G+V  R   + N  + +G +E+     E+LS +  LP P+  +    E  
Sbjct: 61  LRAEYCLKINGVVDRRPEGSENPALGSGAVEVGVTSFEVLSESAPLPFPL--DEPSGEET 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           RF YR+LDLRR    + +  R+ +  + R  ++ + FIE  TP LT S+PEGARDF+VP+
Sbjct: 119 RFHYRYLDLRRPEAAQILRLRSTVNAAARQTLLDQGFIEVETPTLTRSTPEGARDFIVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G++YALPQ+PQ +KQLLM  G +RYFQ+A C+RDED R+DR P EF QLD+EMSFV
Sbjct: 179 RLKPGNWYALPQSPQLFKQLLMVGGVERYFQLARCYRDEDFRADRQP-EFTQLDLEMSFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            QDD++   E+V+  V+              RI Y++A+RRYG+DKPDLR  + + + TE
Sbjct: 238 TQDDVIALAEDVVAAVWGLLG--EEPQLPLPRITYEEAMRRYGSDKPDLRFGVELVDCTE 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         +    +   G    R   D   +WAR +G  GLAY+   + 
Sbjct: 296 YFKDTPFRVFQA------EHVGAVVMPGGADQPRRTLDGWQDWARQRGAKGLAYVL--IG 347

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G ++  GPV+K+L+    + +   +  + GD  FF AGD     S    AR  IA  L
Sbjct: 348 DDGELS--GPVSKNLSEAERDGLAAHVGARPGDCVFFAAGDAKSARSLLGAARCEIAARL 405

Query: 425 GII-NCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGND 473
           G+I +   + F W++DFP  E   +          E      H+ FT P     +    D
Sbjct: 406 GLIADGPKWAFAWVVDFPLLEPAAQAKAAGDVAVGEGAWTAVHHAFTAPTEESLATLEAD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  +  YDLVCNG EI  G IR H  EV  +    +G  ++  +  FG L  AF  G 
Sbjct: 466 PGSALSQAYDLVCNGHEIGGGSIRIHRREVQERVLKLMGFDEDRAQAAFGFLLDAFAYGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGG+A G DRI  LL G  ++REV  FP S    D L G+P  ++  Q  E G+
Sbjct: 526 PPHGGMAFGWDRITALLAGVDSIREVIAFPKSGGGQDPLTGAPGPITPAQRAETGV 581


>gi|260175001|ref|ZP_05761413.1| aspartyl-tRNA synthetase [Bacteroides sp. D2]
 gi|299145644|ref|ZP_07038712.1| aspartate--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|315923234|ref|ZP_07919474.1| aspartyl-tRNA synthetase [Bacteroides sp. D2]
 gi|298516135|gb|EFI40016.1| aspartate--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|313697109|gb|EFS33944.1| aspartyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 587

 Score =  580 bits (1495), Expect = e-163,   Method: Composition-based stats.
 Identities = 225/598 (37%), Positives = 334/598 (55%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            +RTH+CG+L +SDV   V LSGWV R R  GG+ F+D+RD YGITQ+V N +      E
Sbjct: 1   MFRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  R ++  NANI TG IE+   ++ +L+ A   P  +    + 
Sbjct: 61  RANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR+ +  N+  R R+   +R  + +  FIE  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRNAVRSNLELRHRMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI+ T E + + +F+       ++  F R+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDIITTFEGMAKHLFKTLRGVE-LAEPFQRMSWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     V                 R   D + ++ +    G  G+ Y
Sbjct: 297 ELMDIMKGHGFSVFDNAAYVGG-----ICAEGAATYTRKQLDALTDFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  G V     V K       + ++     + GD    ++GD + K      + R
Sbjct: 352 A--RVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     +   D  ++
Sbjct: 408 LEMGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVVNGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAQAQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L +    
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQTQLDELNLIVDLKE 585


>gi|311742338|ref|ZP_07716147.1| aspartate--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313966|gb|EFQ83874.1| aspartate--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 591

 Score =  580 bits (1495), Expect = e-163,   Method: Composition-based stats.
 Identities = 233/600 (38%), Positives = 326/600 (54%), Gaps = 30/600 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    +G  V L+GWV R R HGG+ F+D+R+  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLTADHIGDQVTLAGWVARRRDHGGVAFIDLREASGVVQVVVREEV-----AHQ 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ L + G+V  R A   N  I TG IE+ A+ +EILS A  LP P+    E  +  
Sbjct: 58  LRAEYCLKVVGIVQRRPAGNENDGIATGAIEVVAEDVEILSAAAPLPFPIDEHVEVGDEA 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR      I  R+++    R  +   +F+E  TP LT S+PEGARDF+VP+
Sbjct: 118 RLKYRYLDLRRSGPAAAIRLRSKVNAVARDVLAQHDFVEVETPTLTRSTPEGARDFVVPA 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM  G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 178 RLRPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 236

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + DD++   E +   ++        +   F RI Y DA+RRYG+DKPDLR    +   T+
Sbjct: 237 DADDVMALAEQIYVALWRLI--DVELPAPFPRITYADAMRRYGSDKPDLRLSTELVECTD 294

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+ +   
Sbjct: 295 YFAETSFRVFQAP------YVGAVVMPGGASQPRRQFDAWQEWAKQRGARGLAYVTF--G 346

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L+      +   +  Q GD  FF AG P         AR  I +  
Sbjct: 347 EDGELG--GPVAKNLSDAERAGLAEHVGAQPGDCVFFGAGAPKATRQLLGAARLEIGRRC 404

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE---------EKKIDFAHNPFTMPQGGMESLKGNDLL 475
            +I+ + + FCW++D+P +E  +E           +    H+ FT PQ         +  
Sbjct: 405 DLIDESAWAFCWVVDWPMFEAVDELDSGDVAVGGGEWTAVHHAFTAPQD---PATLAEPG 461

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           +  A  YD+VCNG E+  G +R H  +V  Q F+ +GI +   E++FG L  AF+ G PP
Sbjct: 462 TSLAQAYDIVCNGNELGGGSVRIHREDVQKQVFAIMGIDEAEAEDKFGFLLDAFRFGAPP 521

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G DR   LL G  ++REV  FP S    D L  +P+ ++ +Q +E G+     P
Sbjct: 522 HGGIAFGWDRTCALLSGVDSIREVIAFPKSGGGYDPLTAAPAPITAQQRKEAGVDARPAP 581


>gi|195952842|ref|YP_002121132.1| aspartyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|229559871|sp|B4U7P3|SYD_HYDS0 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|195932454|gb|ACG57154.1| aspartyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 594

 Score =  580 bits (1495), Expect = e-163,   Method: Composition-based stats.
 Identities = 227/602 (37%), Positives = 331/602 (54%), Gaps = 24/602 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           R    G +  S +G  V+L+GW+  +R HGG++F+D+RD  G  Q V     +   ++IA
Sbjct: 3   RDTYIGLVDDSFIGKHVKLAGWIDSIRDHGGVLFIDLRDKEGKLQAVLEESGNKELYDIA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  + E V+ ++GLV  R + T N  I +G +EL  ++IE+L+ +E LP P+    +  E
Sbjct: 63  KHFKEESVVLVEGLVRRRPSGTENPKIKSGNVELLIERIELLNASETLPFPIDDNVDISE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR    K I  R++ +   R       F E  TP L  S+PEGARDFLV
Sbjct: 123 ELRLKYRYLDLRRPKFQKAIKTRSKALKITRDFFEENGFYEIETPFLIKSTPEGARDFLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G FYALPQ+PQ +KQ+LM SGFDRYFQIA CFRDED RSDR P EF Q+D EMS
Sbjct: 183 PSRLHPGKFYALPQSPQLFKQILMISGFDRYFQIARCFRDEDLRSDRQP-EFTQIDFEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE+ DI+  +   L            +S  F RI Y +A+ RYG+DKPD R  + + ++
Sbjct: 242 FVEEQDIME-ISEKLLSKLFLELLDIELSTPFKRITYKEAMERYGSDKPDTRFGLELVDL 300

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++ F ++ F VF   +       +          +R   D + E+ +  G  GLA+    
Sbjct: 301 SDIFKNTNFNVFKSAIE---QKGIIKAIKINKILSRKEIDNLTEYVKGLGAKGLAWGKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                N     P+AK L     +A+  RL+ +D D  FF A  P        + R  + +
Sbjct: 358 -----NGEFSSPIAKFLTEEEIKAMLSRLEAKDQDMIFFSADKPKNVYKILGNLRLQLGK 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL--------KGNDL 474
            L +I+ + F F W++DFP +E+NEEE +++  H+PFT P+                 D+
Sbjct: 413 MLNLIDESKFAFLWVVDFPMFEYNEEEGRLEAMHHPFTSPKTEDLDKIKYIVDKSDKEDI 472

Query: 475 ----LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
                +I A  YD+V NG EI  G IR H  ++    F  + I+ E    +FG L  A +
Sbjct: 473 INIGENIGARAYDIVLNGVEIGGGSIRIHKQDIQKLVFKILNITDEEAAMKFGFLLEALK 532

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGG+A G DR++ ++LG  ++R+V  FP +Q    LL G+P  VS +QL+EL ++
Sbjct: 533 YGAPPHGGLAFGFDRLMAMMLGFDSIRDVIAFPKTQKGTCLLTGAPDVVSDKQLKELHIK 592

Query: 591 IV 592
           I 
Sbjct: 593 IT 594


>gi|320527500|ref|ZP_08028680.1| aspartyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132057|gb|EFW24607.1| aspartyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 590

 Score =  580 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 214/594 (36%), Positives = 339/594 (57%), Gaps = 13/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L +++VG  V L GWV + R  G ++F+D+RD  GI Q+    D +  +  K 
Sbjct: 8   RTHENGTLRLANVGEKVTLVGWVAKRRNLGSLVFIDLRDRSGIVQLTF--DESIADAVKD 65

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E++L + G V  R  +  N  I TG+IE+  + + I++ AE  P+ +  + +  E  
Sbjct: 66  VRNEYILQVTGTVEKR--KDANPKIATGEIEIHVESVNIVNSAETAPITIADDTDTSEDT 123

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  L +N++ R R+    R  +  + F+E  TPIL  S+PEGARD+LVPS
Sbjct: 124 RLKYRYLDLRRSILQQNLILRHRVCMVARNVLDKQGFVEVETPILARSTPEGARDYLVPS 183

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G F+ALPQ+PQ YKQLLM  G ++YFQIA CFRDED R+DR P EF Q+D+EMSF 
Sbjct: 184 RIYNGKFWALPQSPQIYKQLLMIGGMEKYFQIARCFRDEDLRADRQP-EFTQIDIEMSFG 242

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++D I   +E++++ +F+E  N   + ++F+RI + + +RR+G+DKPD+R    + ++T 
Sbjct: 243 DEDTIFAVVEDLMQNIFKETKNYT-LEDHFVRIPWAECMRRFGSDKPDMRFGNEIQDITS 301

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQPGLAYIFWRL 363
            F ++EF+VF   +                  +R   D++ ++ +       LAY+    
Sbjct: 302 VFENTEFQVFKNTIENGGIVNCVKFENAADKYSRKGLDQLQDFVKHGFKAKALAYLKMEN 361

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           D        G +AK L+      +  +L + + D    IA +     +     R  +  E
Sbjct: 362 D-----VLTGSIAKVLSEEEKAKLVEQLGLANNDLVLVIADNARIVQASLGALRVRLGHE 416

Query: 424 LGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           L +I     ++F W+ DFP +E++EE+++   AH+PFT P+         D   + +  Y
Sbjct: 417 LNLIPTETTYKFLWVTDFPMFEYSEEDERWVAAHHPFTAPKEEDVDKLFTDPGHVSSRAY 476

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+ SG IR H  E+  + F  +G+S E  + RFG    +F+ G PPHGG+  G
Sbjct: 477 DLVLNGYELLSGSIRIHSQELQAKVFEAIGLSLEDAKARFGFFLDSFRYGTPPHGGVGIG 536

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           ++R++M+L G  N+R+V  FP + +  DL+  +P+ V  +QL  LG+ I +  K
Sbjct: 537 LERLIMVLAGTDNIRDVVAFPTTNSSFDLMSEAPNVVDKKQLDILGIEISKQEK 590


>gi|284991587|ref|YP_003410141.1| aspartyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284064832|gb|ADB75770.1| aspartyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 591

 Score =  580 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 233/591 (39%), Positives = 333/591 (56%), Gaps = 19/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD GS V L+GWV R R HGG++F+D+RD  G  QVV        E A +
Sbjct: 3   RTHDAGTLRASDAGSPVTLAGWVARRRDHGGVVFVDLRDASGYVQVVVR-----EEEAHA 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  + TG+IE++A ++ +LS A  LP P+  ++   + +
Sbjct: 58  LRNEFCVLVTGEVRRRPEGNENPELPTGEIEVAAAELRVLSSAAPLPFPIETDQAASDDV 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R++YR+LDLRR    + +  R+ +    R  M    F+E  TP LT S+PEGARDF+VP 
Sbjct: 118 RYRYRYLDLRRQGPARVLRLRSEVNRVARGVMAQHGFVEVETPDLTRSTPEGARDFVVPV 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM  G +RY+QIA CFRDED R+DR P EF QLD EMSFV
Sbjct: 178 RLQPGKWYALPQSPQLFKQLLMIGGLERYYQIARCFRDEDFRADRQP-EFTQLDFEMSFV 236

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++DD+L  +E+V+R ++ E +          R+ Y +A+ R+G+DKPDLR  I +  +T 
Sbjct: 237 DRDDVLAVVEDVVRALWRELAAYEVPE--IPRMSYREAMDRFGSDKPDLRFGIELTELTS 294

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF       P      +PA G    RAF D   +WA+S+G  GLAY+     
Sbjct: 295 YFAETPFRVFQ-----TPYVGAIVMPAGGSQPRRAF-DAWQDWAKSRGHRGLAYVTIA-- 346

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+++      +   +  Q GD  FF AG   +       ARN IA+ L
Sbjct: 347 EDGTLG--GPVAKNISEAERSGLVEAVGAQPGDCVFFAAGARRQAQELLGAARNEIARRL 404

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            +I    + F +++DFP +E  E+  +  F H+PFT P          D  +  +  YDL
Sbjct: 405 ELIEPGSWSFLFVVDFPMFEETED-GEWTFMHHPFTSPTSEWRDRFAEDKGAALSDAYDL 463

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           VCNG E+ASG +R    ++  + F  +G+S+E    RFG    AF  G PPH G A G D
Sbjct: 464 VCNGNELASGSVRIADPDLQERVFETLGMSREEARERFGFFLEAFAYGPPPHAGAAIGWD 523

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           R   LL G +++REV  FP +    D L G+P+ ++  Q +E G+      
Sbjct: 524 RTCALLAGVESIREVIAFPKTGAGFDPLTGAPTPITEAQRKEAGIDAKPEE 574


>gi|15838454|ref|NP_299142.1| aspartyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|24212425|sp|Q9PCC5|SYD_XYLFA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|9106945|gb|AAF84662.1|AE004007_1 aspartyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 589

 Score =  580 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 219/598 (36%), Positives = 326/598 (54%), Gaps = 19/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN------PDSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI QV  +       +S  
Sbjct: 2   RTHFCGLIDETLIGHTVTLAGWTDVARNLGGVCFIDLRDHEGIVQVTVDSRAIDQNNSEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A  +  E VL ++G+V +R A  +N  I TG++E+ A KI+IL+ A    LP     
Sbjct: 62  FKVASGLSYEDVLQVEGVVCARHA--VNDKIKTGKVEVIATKIKILNKAAP--LPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E IR KYR+LDLRR  + +    R +++ ++R  +    F +  TPILT ++PEGAR
Sbjct: 118 NPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E ++R VF+E +    +   F R+ + +A+RR+G+DKPDLR  + 
Sbjct: 237 MEFAFVSERDVQDFVEEMIRRVFKEVAGIE-LDTTFPRMTWTEAMRRFGSDKPDLRINLE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V      S F  F+  ++   G         G   +R   D    +    G  GLAY
Sbjct: 296 LIDVAALVADSTFTPFTDAVAHPNGRVAALRIPSGAVLSRKQIDEYAAYTAKYGATGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                  +       P+AK  +     A+   +  + GD  FF AG+  K   F    R 
Sbjct: 356 AKL----APIGEITSPIAKFFSEDAFAALLSHIGAEKGDIVFFGAGNYNKVSDFMGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSI 477
              ++  +I  + +   W+ DFP +EW+EE ++    H+PFT P              + 
Sbjct: 412 KAGKDFALITAD-WRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAIDDIDELRAHARTA 470

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD+V NG EI  G IR H  E+    F  +GI+++    +FG L  A   G PPHG
Sbjct: 471 LSRGYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARAKFGFLLDALNYGAPPHG 530

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GIA GIDRI  L+ G +++R+V  FP +     L+  +PS++S EQL E+ + I + P
Sbjct: 531 GIAFGIDRIAALIAGTESIRDVIPFPKTTGAQCLMTDAPSSISEEQLSEIHV-ITKKP 587


>gi|78185800|ref|YP_378234.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|97196970|sp|Q3AVS9|SYD_SYNS9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78170094|gb|ABB27191.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 610

 Score =  580 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 213/603 (35%), Positives = 334/603 (55%), Gaps = 22/603 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL    + + V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSNGCGDLRKDSIDAVVQLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGAEAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGERE 119
           + +RSE VL + G V +R AE++N  + TG +E+ A +I +L+        P+ V  E  
Sbjct: 62  EHLRSETVLQVHGKVRARPAESLNDKLATGAVEVLASEIVVLNKVTGNLPFPVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR  ++ N+  R R I + R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRARTIQAARRFLEDEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YVLPSRVCGGDWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ ++ IL   E+++  +++       +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 241 EMSFMGEEQILQLNEDLICAIWKSVKGIE-LPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNEWARSQGQPGLAY 358
             V++      F+VFS  +      +V A+P      +        + ++ +Q       
Sbjct: 300 VTVSDIVQDMGFKVFSGAVKSGGSVKVIAVPGGNDALSNVRIKPGGDVFSEAQAAGAGGL 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
            F R+ + G +  +G +  +L+      +  R     G    F AG+           R 
Sbjct: 360 AFIRVRDGGEIDTIGAIKDNLSDEQKAELLKRTGATPGTLLLFGAGETAIVNKALDRVRQ 419

Query: 419 HIAQELGIINCN----CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           ++A+EL ++  +     + F W++DFP +E+N +E + +  H+PF  P        G+D 
Sbjct: 420 YLAKELNLVKPDRQNDAWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNTDD---LGSDP 476

Query: 475 L-------SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                     +A  YDLV NG E+  G +R H S +  Q    VG+  E  + +FG L  
Sbjct: 477 AQWATTLPKARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQAQFGFLIN 536

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           A   G PPHGG+A G+DR+VMLL G  ++R+   FP +Q    L+  +PS+V+ +QL+EL
Sbjct: 537 ALDMGAPPHGGLAFGVDRMVMLLAGEDSIRDTIAFPKTQQARCLMTDAPSSVAEKQLQEL 596

Query: 588 GLR 590
            + 
Sbjct: 597 HVS 599


>gi|297562031|ref|YP_003681005.1| aspartyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846479|gb|ADH68499.1| aspartyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 584

 Score =  580 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 228/596 (38%), Positives = 329/596 (55%), Gaps = 16/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G+ V L+GWV R R HGG++FLD+R+  G+ QVV   D    ++A  
Sbjct: 3   RTHEAGALRAEHAGATVVLAGWVARRRDHGGVVFLDLREASGVVQVVVRED----DLAHD 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G V  R     N  I TG +E+ A +IE+LS A  LP  +    +  E  
Sbjct: 59  LRAEYCIKVTGSVRVRPEGNENPEIPTGAVEVVADEIEVLSEAAPLPFQLDSAADVAEET 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LD+RR  +  N+  R++        M    F    TP +T S+PEGARDFLVP 
Sbjct: 119 RLRYRYLDIRRQEMADNLRLRSKATYVAHEVMRDLGFTYVETPYMTRSTPEGARDFLVPV 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G +YALPQ+PQ +KQLLM  G +RY+Q+  CFRDED R+DR P EF Q+D+EMSFV
Sbjct: 179 RLQPGHWYALPQSPQLFKQLLMVGGMERYYQLTRCFRDEDLRADRQP-EFTQIDLEMSFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D+    E +   +  E      +   F R+ Y +A+ R+G+DKPDLR    +  VT 
Sbjct: 238 DEEDLFAVGEKLFTRLLREVRGVE-LPERFPRMRYSEAMDRFGSDKPDLRFGQELVEVTA 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   EWARS+G  GLAY+  +  
Sbjct: 297 YFADTPFRVFKAP------YVGAVVMPGGASQTRKELDAWQEWARSRGAKGLAYVLVQ-- 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G++   GPVAK+L+      +  ++    GD+ FF AG           AR  I +  
Sbjct: 349 EDGSLG--GPVAKNLSEAERGGLAAQVGAAPGDAVFFAAGARTASQELLGAARLEIGRRC 406

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G+I+ + +E  WI D P +E  +EE      H+PFT P    E+   +   +  +  +DL
Sbjct: 407 GLIDTSRWEILWITDMPLFEEADEEGSWKPVHHPFTAPAVQDEADFQDHPGTTDSRAFDL 466

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG+E+ SG IR H +E+  + F  +G+SK   E++FG L  AF+ G PPHGG+A G D
Sbjct: 467 VLNGYELVSGSIRIHRAEMQQRIFDVIGLSKAEAESKFGFLLEAFKFGPPPHGGLAVGWD 526

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           RIVMLL G   +REV  FP + +  D L G+P+ ++ EQ  E G+    + ++  K
Sbjct: 527 RIVMLLAGQPTIREVIAFPKTASGGDPLTGAPTPITAEQRAEAGVDADPDAEEREK 582


>gi|262196372|ref|YP_003267581.1| aspartyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262079719|gb|ACY15688.1| aspartyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 618

 Score =  579 bits (1493), Expect = e-163,   Method: Composition-based stats.
 Identities = 218/592 (36%), Positives = 337/592 (56%), Gaps = 10/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           +TH CG L   D G  V L+GWV   R HGG +F D+RD  G+TQ+V +P  D+   ++A
Sbjct: 10  KTHGCGALRADDNGKTVVLTGWVDVRRDHGGCVFADLRDRTGLTQIVFDPTVDAEAHKLA 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+E+ + + G V SR  + +N  + TG IE++ ++IEI S A   P P+  + +  E
Sbjct: 70  GDLRTEYCIGVVGEVRSR-GDNVNPRMPTGAIEVACKQIEIFSRAATPPFPIEDDLDTNE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R  YR+LDLRR  L +N+  R + ++SMR  + A  F +  TP L   +P GAR+F+V
Sbjct: 129 ALRLSYRYLDLRRPVLQRNLQMRAQAVHSMRTYLAANGFSDIETPFLVKYTPGGARNFVV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+  GSFYAL ++PQ YKQLLM +GF+RY+Q+  CFRDED R DR P EF Q+D+E+S
Sbjct: 189 PSRLQAGSFYALAESPQIYKQLLMVAGFERYYQVVRCFRDEDLRLDRQP-EFTQIDIELS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  +   +E ++  ++++      +   FLR+ +D+A+R+YG DKPDLR  + +  +
Sbjct: 248 FIDEKGLQTIIEGMIAKLWQDVLGVE-LQTPFLRMSWDEAMRKYGVDKPDLRLDLELCEI 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE    S F+VF  +++     +   +P +G   +R   D +  +A+  G  G+AY+  +
Sbjct: 307 TEACASSGFQVFENVIAKGGIVKCLRVP-EGDRLSRTQLDGLTGFAKPYGVKGIAYVRVK 365

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
              +      G   K  +     A+       DGD   F A  P    +     R HI  
Sbjct: 366 DGGA----WQGAPGKAFSDEARLAVNAAAGASDGDVLLFCADKPRVANTCMGAVRLHIGD 421

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           +LG+I    + F W+ D P +E  E+   +  +H+PFT P+   E    +    + A  Y
Sbjct: 422 KLGMIREGEWRFMWLTDPPLFEQPEDGGALVSSHHPFTSPRPEDEEHLESAPERVLARAY 481

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+  G IR H S++  + F  +GIS E  + +FG L  AF+ G PPHGGIA G
Sbjct: 482 DLVLNGVEVGGGSIRIHRSDLQARIFKALGISDEEAQEKFGFLLEAFKYGPPPHGGIALG 541

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR+ MLL GA+++R+V  FP +Q   DL+  +P+ V    L EL +++   
Sbjct: 542 LDRLSMLLTGAESLRDVLAFPKTQKGSDLMSDAPTPVGSAHLDELYIQLKPE 593


>gi|124026867|ref|YP_001015982.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|123961935|gb|ABM76718.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 612

 Score =  579 bits (1493), Expect = e-163,   Method: Composition-based stats.
 Identities = 226/604 (37%), Positives = 341/604 (56%), Gaps = 20/604 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACF 59
           +  R  +CG+L  S + + V+L GWV R R HGG+IF+D+RD  G  Q+  +PD     F
Sbjct: 5   NFMRNKTCGELRASAISANVQLCGWVDRRRDHGGVIFIDLRDRSGTIQITVDPDQGQDLF 64

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV---AEELPLPVFG 116
            IA+S+R+E VL I+GLV +R  E IN  I TG++E+ A+ I+IL+         + +  
Sbjct: 65  SIAESLRNETVLQINGLVRARPDEAINTKIPTGEVEVLAKNIKILNTVTSTLPFSVSIHD 124

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           E    E IR ++R+LDLRR+ ++ N+  R   + + R  +  E FIE  TPILT S+PEG
Sbjct: 125 EESVKEEIRLRHRYLDLRRERMNNNLRLRHNTVKAARSFLENEGFIEVETPILTRSTPEG 184

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSRV  G F+ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF Q
Sbjct: 185 ARDYLVPSRVCGGEFFALPQSPQLFKQLLMVGGVERYYQVARCFRDEDLRADRQP-EFTQ 243

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+EMSF+E+ +I+   E ++  ++++    + +   F R+ + +++ R+GTD+PD R  
Sbjct: 244 LDIEMSFMEEKEIIELNEKLIVSIWKKIKGID-LQTPFPRMTWQESMDRFGTDRPDTRYG 302

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQ 353
           + + N ++ F  S F+VFS  +S     +   I       +         +   A+  G 
Sbjct: 303 MELVNTSDLFSKSGFKVFSNAISSGGCVKCITIEDGNNLISNVRIKPGGDIFSEAQKAGA 362

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLA+I  R+ +   V  +G +  +L     + + ++   + GD   F AG         
Sbjct: 363 GGLAFI--RVRDDQEVDTIGAIKDNLTTSQIKELLLKTQAKPGDLILFGAGPTNIVNRTL 420

Query: 414 ADARNHIAQELGIINCNC----FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM--- 466
              R  IA++L II+ N     + F W+ DFP +E+N +E +++  H+PF  P+      
Sbjct: 421 DRVRQFIAKDLKIISDNELKTQWNFLWVTDFPMFEFNSDENRLEAIHHPFCAPKPEDIGE 480

Query: 467 -ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
            ESL  + L +  A  YDLV NG EI  G +R H SE+       +G+SK   E +FG L
Sbjct: 481 SESLWKDKLPNSNAQAYDLVLNGLEIGGGSLRIHNSELQKTVLEVIGLSKNEAEEQFGFL 540

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             A   G PPHGGIA G+DRIVMLL    ++R+   FP +Q     +  +P+ V  +QL 
Sbjct: 541 IDALAMGAPPHGGIAFGLDRIVMLLANEDSIRDTIAFPKTQQARCSMAKAPANVENKQLE 600

Query: 586 ELGL 589
           +L +
Sbjct: 601 DLHI 604


>gi|183601795|ref|ZP_02963165.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219683675|ref|YP_002470058.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241190707|ref|YP_002968101.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196113|ref|YP_002969668.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|61679298|gb|AAX52927.1| AspRS [Bifidobacterium animalis subsp. animalis ATCC 25527]
 gi|183219401|gb|EDT90042.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219621325|gb|ACL29482.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240249099|gb|ACS46039.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250667|gb|ACS47606.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|295793696|gb|ADG33231.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 600

 Score =  579 bits (1493), Expect = e-163,   Method: Composition-based stats.
 Identities = 225/610 (36%), Positives = 344/610 (56%), Gaps = 33/610 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   D+    VG  V L+GWV R R HGG+ F+D+RD+ G+ QVV N +    E+A+
Sbjct: 7   YRTHHATDVTEVLVGEHVTLAGWVDRRRDHGGVAFIDLRDNTGLVQVVINEE----EMAR 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFG 116
            +RSE+V+ +DG V  R     N ++ TG++E+ A+KI +L+ ++ LP            
Sbjct: 63  PLRSEYVIEVDGKVRQRPEGNENDHLATGKVEVVAEKIRVLAKSDALPFQVSTALENESE 122

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR  + +NI  R+ ++ + R  +    F E  TP +  S+PEG
Sbjct: 123 NKLPGEDVRLKYRYLDLRRPAMQRNIKLRSDMMRAARTELDKLGFTEVETPTMIKSTPEG 182

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM +G +RY+Q A C+RDED R+DR P EF Q
Sbjct: 183 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVAGVERYYQFARCYRDEDFRADRQP-EFTQ 241

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEMSFV+Q+D++   E V++ +++  ++G  +     RI + +A+ +YG+DKPDLR  
Sbjct: 242 LDMEMSFVDQEDVIAMAEQVIKAIWK--ADGYDIETPIRRIPWQEAMDKYGSDKPDLRFG 299

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +T++F ++ FRVF         Y    +   G    R   D   +WA+ +G  GL
Sbjct: 300 NELIELTDYFKNTPFRVFQAP------YVGAVLFKGGASTPRRQFDAWQDWAKQRGAKGL 353

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E+G +   GPVAK+L+      ++  +  +DGD+ FF AG            
Sbjct: 354 AYVVF--GENGELK--GPVAKNLSGEERNGLKEAVGAEDGDAVFFAAGARESSQLLLGAV 409

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A   G+++   F FCW++DFP ++  ++           K    H+PFTMP     
Sbjct: 410 RVELANRAGLLDPKKFAFCWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWI 469

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H  ++  +  + +GI+ +  +++FG L  
Sbjct: 470 DTFDEDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVLGITPQEAQDKFGFLLE 529

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH GIA G DR V LL GA ++R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 530 AFKYGAPPHAGIALGWDRTVALLAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAET 589

Query: 588 GLRIVENPKK 597
           G+       +
Sbjct: 590 GVDYDPEEDE 599


>gi|313816211|gb|EFS53925.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|314955558|gb|EFS99959.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|315105747|gb|EFT77723.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|315108667|gb|EFT80643.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
          Length = 588

 Score =  579 bits (1493), Expect = e-163,   Method: Composition-based stats.
 Identities = 217/584 (37%), Positives = 317/584 (54%), Gaps = 23/584 (3%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  +R+E+ + + G+V +R 
Sbjct: 2   TLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHDLRNEYCIRVTGVVEARP 61

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
               N N+ TG+IE++  ++E+L+ +  LP  +       E  R KYR+LDLRR   H+ 
Sbjct: 62  EGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDARLKYRYLDLRRPHQHEA 121

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+R+  G +YALPQ+PQ +
Sbjct: 122 LVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPARLAPGCWYALPQSPQLF 181

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMSFV+QDD++   E  +   +
Sbjct: 182 KQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMSFVDQDDVIALAEETMAACW 240

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
           +       +     RI + +A+ RYG+DKPDLR    +  VT+ F ++ FRVF       
Sbjct: 241 KIIG--VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITEVTDFFANTAFRVFQAP---- 294

Query: 322 PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNI 381
             Y    +   G    R   D   EWAR++G  GLAYI      S      GPVAK+++ 
Sbjct: 295 --YVGAVVMPGGASLPRRQFDAWQEWARTRGAKGLAYITI----SDEGVPEGPVAKNISE 348

Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFP 441
                I  ++  + GD+ FF AG           AR  I +   + + + + FCW++D P
Sbjct: 349 EEKAGIAEKVGAKPGDAIFFAAGSKTSSQELLGAARLEIGRRCELFDPSDWAFCWVVDAP 408

Query: 442 FYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
            ++  +E                 H+ FT P          D  S  A+ YD V NG E+
Sbjct: 409 LFKPTKEAEASGDVAVGTGAWTAVHHAFTSPTPDCLDTFDTDPGSALAYAYDFVVNGNEV 468

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G IR H  +V  + F+ +GI  E  + +FG L  AF+ G PPHGGIA G+DR+VMLL 
Sbjct: 469 GGGSIRIHRRDVQERVFNVMGIGPEEAQEKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLG 528

Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G + +R+V  FP + N  D L  +P+ ++  Q RE G+      
Sbjct: 529 GFETIRDVIAFPKTGNGYDPLTAAPAPITPAQRREAGVDAKPKE 572


>gi|237717546|ref|ZP_04548027.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229453132|gb|EEO58923.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 587

 Score =  579 bits (1493), Expect = e-163,   Method: Composition-based stats.
 Identities = 225/598 (37%), Positives = 334/598 (55%), Gaps = 18/598 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            +RTH+CG+L +SDV   V LSGWV R R  GG+ F+D+RD YGITQ+V N +      E
Sbjct: 1   MFRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  R ++  NANI TG IE+   ++ +L+ A   P  +    + 
Sbjct: 61  RANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIENNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR+ +  N+  R R+   +R  + +  FIE  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRNAVRSNLELRHRMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI+ T E + + +F+       ++  F R+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDIITTFEGMAKHLFKTLRGVE-LAEPFQRMSWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     V                 R   D + ++ +    G  G+ Y
Sbjct: 297 ELMDIMKGHGFSVFDNAAYVGG-----ICAEGAATYTRKQLDALTDFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  G V     V K       + ++     + GD    ++GD + K      + R
Sbjct: 352 A--RVEADGTVK--SSVDKFYTQEVLQQMKEAFGAKPGDLILILSGDDVMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     +   D  ++
Sbjct: 408 LEMGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H +++  + F  +G + E  + +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVVNGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAQAQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+A G+DR V L  G  ++R+   FP + +  D+++ +PS +   QL EL L +    
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPSAIDQTQLDELNLIVDLKE 585


>gi|34558088|ref|NP_907903.1| aspartyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|46577163|sp|Q7M8A6|SYD_WOLSU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|34483806|emb|CAE10803.1| ASPARTYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 587

 Score =  579 bits (1493), Expect = e-163,   Method: Composition-based stats.
 Identities = 233/598 (38%), Positives = 340/598 (56%), Gaps = 19/598 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--AC 58
           M+  RTH C  LG  ++G  V L GW +  R HGG+IF+D+RD  GI Q+V++PD     
Sbjct: 1   MYVLRTHLCTQLGEGNIGEEVILCGWCNTYRDHGGVIFIDLRDKSGIIQLVSDPDDSPKA 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E A+ VR E+VL   G V +R     N  + TG+IE+  +++ I + +   P+   G+ 
Sbjct: 61  HENARVVRDEFVLIAKGKVRARGTGLENPKLATGKIEVILEELIIENRSLTPPI-TIGDE 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R KYRFLDLR    +     R++   + R  +    F+E  TPILT ++PEGAR
Sbjct: 120 SVGEDLRLKYRFLDLRNPKAYDTFRLRSKAAIAARNSLDGMGFLEVETPILTKATPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV+ G F+ALPQ+PQ +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D
Sbjct: 180 DYLVPSRVHPGEFFALPQSPQLFKQLLMISGFDRYFQIAKCFRDEDLRADRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSF +Q+D++   E +L  +F      +T+  +F  + YD A+  YG+DKPDLR  + 
Sbjct: 239 VEMSFCDQEDVMGVAEKLLGDIFSACG--HTIPEHFPHLTYDRAMEEYGSDKPDLRFEMP 296

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGL 356
           +  V + F  S   +F+KI   +      A+  KGG     R     + E+ +  G  GL
Sbjct: 297 LVEVIDLFGDSNNEIFAKIAQDSKKNRFKALKVKGGDLFFTRKTLGVLEEFVKKFGAAGL 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AYI  +          GP+ K ++  +   +  RL+ + GD  FF AG+      +    
Sbjct: 357 AYIQVK-----EEGLKGPLVKFMSERSLSLLLERLNPEVGDIIFFGAGEKKSVWDYMGRL 411

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +A+++G+I+ N   F W+++FP +E +E   K+   H+PFTMP+     L   D+  
Sbjct: 412 RLEVAKQMGLIDPNQLCFLWVVNFPMFEKDE--GKVKALHHPFTMPKN----LDCEDVEE 465

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I +  YD+V NG E+  G IR H   +  + F  +GI+ E  + +F  L  A + G PPH
Sbjct: 466 ISSIAYDVVLNGVELGGGSIRIHQEAIQKRVFDLLGIAPEEAQEKFDFLLEALKFGAPPH 525

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           GG A G DR++MLL  + ++R+V  FP +Q     L  +PS VS EQL+EL +RI E 
Sbjct: 526 GGFAIGFDRLIMLLTQSPSIRDVIAFPKTQKATCPLTSAPSPVSSEQLKELHIRIKEK 583


>gi|255534114|ref|YP_003094486.1| aspartyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255347098|gb|ACU06424.1| aspartyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 581

 Score =  579 bits (1492), Expect = e-163,   Method: Composition-based stats.
 Identities = 229/589 (38%), Positives = 335/589 (56%), Gaps = 16/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT +CG L + ++G  V L GWV + R  GG+ F+DIRD YGITQ+V N D      E A
Sbjct: 3   RTTTCGALTIKNLGENVILCGWVQKSRDLGGMTFIDIRDRYGITQLVFNMDDNRELCEAA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++  E+V+   GLV+ RS +  N  + TG++E+    +E+L+ A+  P  +  E +  +
Sbjct: 63  RNLGREFVIKASGLVVERSNK--NLKMPTGEVEIKITALEVLNAAKLPPFLIDDETDGGD 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR+ +  N++ R +I  ++R  +   +FIE  TP+L  S+PEGARDF+V
Sbjct: 121 DLRMKYRYLDLRRNPVRNNMIIRHKIAQAVRRYLDGLDFIEVETPVLIKSTPEGARDFVV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D EMS
Sbjct: 181 PSRMNAGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+EQ+DILNT E ++R +F+E    +       R+ Y DA+R YG+DKPD R  +    +
Sbjct: 240 FIEQEDILNTFEGLIRTLFKEIKGIDLPEV--PRMQYADAMRLYGSDKPDTRFDMQFVEL 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQPGLAYIFW 361
                  +F VF     V        I AKG     R   D + ++ +         I+ 
Sbjct: 298 NHLVKGKDFPVFDHAELV------IGINAKGCASYTRKQVDELTDFIKRPQVGATGLIYL 351

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R +E G++     V K  N  + +     L+ Q GD    +AG   K     ++ R  + 
Sbjct: 352 RHNEDGSLK--SSVDKFYNEEDLKGWSAALNTQPGDLVLVMAGTTDKVRKQLSELRLEMG 409

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             LG+ + N F   W++DFP  EW+EE ++    H+PFT P+     L       ++A  
Sbjct: 410 NRLGLRDKNVFSALWVLDFPLLEWDEETERYHAMHHPFTSPKPEDIVLLDTKPAEVRANA 469

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H   +    F ++G S E  + +FG L  AF+ G PPHGGIA 
Sbjct: 470 YDMVINGTEVGGGSIRIHDRALQALMFKHLGFSTEEAQKQFGFLMDAFEFGAPPHGGIAF 529

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           G DR+  +  G  ++R+V  FP + +  D+++ SPST+  +QL EL ++
Sbjct: 530 GFDRLCSIFAGLDSIRDVIAFPKNNSGRDVMIDSPSTIDEKQLNELKIK 578


>gi|33862244|ref|NP_893805.1| aspartyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|46577193|sp|Q7UZH8|SYD_PROMP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33634462|emb|CAE20147.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 598

 Score =  579 bits (1492), Expect = e-163,   Method: Composition-based stats.
 Identities = 227/599 (37%), Positives = 342/599 (57%), Gaps = 16/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R   C +L  SD+G  V L GWV R R HGG+IF+D+RDH G  Q+  NP+     F+ A
Sbjct: 2   RNKICEELNKSDIGKVVNLCGWVDRRRDHGGVIFIDLRDHSGFMQITINPEDGETLFKQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           + +R+E V+ ++G+V  R  ++IN NI+TG++EL  + ++IL+  +     P+ V     
Sbjct: 62  EILRNETVIMVNGIVNERPKDSINKNILTGELELKVKDLQILNQIKNNLPFPISVHDYEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLRR  L KN+  R +II ++R  +    F E  TP+LT S+PEGARD
Sbjct: 122 TKEELRLKYRYLDLRRGKLLKNLKTRHKIIKAVREYLDNSGFTEVETPLLTKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP+R++ G F+ALPQ+PQ +KQLLM  G D+Y+QIA CFRDED R+DR P EF QLD+
Sbjct: 182 FLVPARLSNGEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ +++I++  E +++ V++   N N     F R+ + +A+  YGTD+PD R  +++
Sbjct: 241 EMSFISEEEIISFNEKLIKNVWKNVLNINFNEE-FPRMTWQEAMDNYGTDRPDTRYEMLL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
            N+     +  F +F+K +      +   I       +         + + A+  G  GL
Sbjct: 300 KNLGGILGNIGFNIFTKAIQNGGAIKSITIKDGNTSISNVRIKPGGDIFKVAQDAGAGGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  + DE   +  +G +  +LN  +   I    + +DGD     AG+           
Sbjct: 360 AFIRVKGDE---LETIGAIKNNLNKDHISTILKITEAKDGDLILLGAGNTQIVNQSLDRV 416

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG---GMESLKGND 473
           R +IA++L +I  + + F W+ DFP +E NEEEK+ +  H+PF  P+             
Sbjct: 417 RQYIAKDLKLIEKDKWNFLWVTDFPMFEMNEEEKRFEALHHPFCSPKNIKLEDSKELKEK 476

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           + S  A  YDLV NG E+  G +R H +E+  +    VG++   +  +FG L  A + G 
Sbjct: 477 IESSTAHAYDLVLNGLELGGGSLRIHQAEMQREVLRTVGLTDNQINEKFGFLIEALEMGA 536

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           PPHGGIA G+DRI ML+LG  ++RE   FP +Q    LL  +PS VS  QL+EL + I 
Sbjct: 537 PPHGGIAFGVDRITMLILGEDSIRETIAFPKNQQAKCLLTNAPSNVSKSQLKELDIEIT 595


>gi|294790954|ref|ZP_06756112.1| aspartate--tRNA ligase [Scardovia inopinata F0304]
 gi|294458851|gb|EFG27204.1| aspartate--tRNA ligase [Scardovia inopinata F0304]
          Length = 597

 Score =  579 bits (1492), Expect = e-163,   Method: Composition-based stats.
 Identities = 229/609 (37%), Positives = 336/609 (55%), Gaps = 33/609 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   D+    +G  V +SGWV R R HGG+ FLD+RD  G+ QVV        E+A+
Sbjct: 6   YRTHRAADITEDVIGQKVTISGWVDRRRDHGGVAFLDVRDASGLIQVVV----YDEEVAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-------EELPLPVFG 116
            +RSE+V+ + G V  R     N +I TG +E+ A+K+ +L+ +                
Sbjct: 62  PLRSEFVVQVTGDVRERPEGNENDHIATGNVEIVAEKVTVLARSAALPFQVSTALSNEVQ 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           E+   E  R KYR+LDLRR  + +N+  R+ +  + R ++    F E  TP L  S+PEG
Sbjct: 122 EKLPGEDTRLKYRYLDLRRPQMQRNLKLRSNMSKAARNQLDELGFTEVETPTLIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R++ GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLSPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEMSFV Q+D++   E V++ V+E  S G  V+  F RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMSFVSQEDVIALAEKVVKAVWE--SAGYQVTIPFHRISWTDAMNKYGSDKPDLRFE 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             + ++T++F ++ FRVF         Y    +        R   D   +WAR +G  GL
Sbjct: 299 NQLVDLTDYFKNTPFRVFQA------DYVGAVVYQGAADLPRRQFDAWQDWARQRGAKGL 352

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E G +   GPVAK+L+    + +   +  + GD+ FF AG           A
Sbjct: 353 AYVQF--SEDGILK--GPVAKNLSDSERDGLMEAVHAKPGDAVFFAAGHKESSQLLLGAA 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  IA+  G++  + F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 409 RVEIAKRQGLLKKDDFAFVWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSADWI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG EI  G +R H  ++  +  + +GI +E  +++FG L  
Sbjct: 469 DTFDQDPEHAMSDSYDIVCNGNEIGGGSVRIHRDDIQDRVLNVLGIGQEEAQDKFGFLLE 528

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH GIA G DR   +L G  ++R+V  FP S    D L G+P+ +S EQ  E 
Sbjct: 529 AFKYGAPPHAGIAFGWDRCAAILAGEDSIRDVIAFPKSGGGADPLTGAPAPISDEQRAET 588

Query: 588 GLRIVENPK 596
           G+    + +
Sbjct: 589 GVDFDPDEE 597


>gi|332673584|gb|AEE70401.1| aspartate--tRNA ligase [Helicobacter pylori 83]
          Length = 577

 Score =  579 bits (1492), Expect = e-163,   Method: Composition-based stats.
 Identities = 221/591 (37%), Positives = 338/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+     + +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAIG--HHISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  + D Q GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILEKTDAQTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--YGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|298736310|ref|YP_003728836.1| aspartyl-tRNA synthetase (AspS) [Helicobacter pylori B8]
 gi|298355500|emb|CBI66372.1| aspartyl-tRNA synthetase (AspS) [Helicobacter pylori B8]
          Length = 577

 Score =  579 bits (1492), Expect = e-163,   Method: Composition-based stats.
 Identities = 220/591 (37%), Positives = 337/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKSVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+     + +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQAIFKAIG--HDISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F  S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFRDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E V+ +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEVQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSHSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|332292097|ref|YP_004430706.1| aspartyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170183|gb|AEE19438.1| aspartyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 585

 Score =  578 bits (1491), Expect = e-163,   Method: Composition-based stats.
 Identities = 220/596 (36%), Positives = 332/596 (55%), Gaps = 15/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACF 59
            YRTH+ G L  +DV   V L+GWV + R  G II++D+RD YG+TQ+V +    D++  
Sbjct: 1   MYRTHNNGSLRAADVNKEVTLAGWVQKSRDKGFIIWVDLRDRYGMTQLVFDEERTDASIM 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A+ +  E+V+   G V+ R ++  N NI TG IE+   K+E+L+ +   P  +  E +
Sbjct: 61  EQARKLGREFVIQATGTVIERDSK--NPNIATGDIEILVSKLEVLNASLTPPFTIEDETD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR  +  +++ R ++   +R  +  ++FIE  TP L  S+PEGARD
Sbjct: 119 GGEDVRMKYRYLDIRRKPVRDSLIFRHKVALEVRKYLSDQDFIEVETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FVEQ+DILN  E + R + +E +        F R+ YDDA+R YG DKPD+R  +  
Sbjct: 238 EMAFVEQEDILNIFEGLTRHLLKEVNGVEIEK--FPRMLYDDAMRLYGNDKPDIRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             + E   H +F VF+    V            G    R   D++ +W +      L  +
Sbjct: 296 GELNEVAQHKDFGVFNNAELVVG-----IAVPGGNSYTRKEIDKLIDWVKRPQVGALGMV 350

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R ++ G  +    V K  +  +          Q GD    ++G+  K  +  +  R  
Sbjct: 351 YSRCNDDG--SFKSSVDKFYDQEDLAKWAAVTRAQKGDLICILSGETSKVRAQMSALRME 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A  LG+ +   F   W++DFP  E +EE       H+PFT P+ G   L       +KA
Sbjct: 409 LATRLGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQIELLDTKPGEVKA 468

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H  E       ++G S+E  + +FG L  AF+ G PPHGG+
Sbjct: 469 NAYDLVLNGNEIGGGSIRIHDKETQAIMLRHLGFSEEEAKAQFGFLMDAFEYGAPPHGGL 528

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR+V +L G + +R+   FP + +  D+++ +P+ +   Q++EL L++ +  
Sbjct: 529 AFGLDRLVAILGGQETIRDFIAFPKNNSGRDVMIDAPAFLDDVQMKELNLKLRDQK 584


>gi|254450036|ref|ZP_05063473.1| aspartyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198264442|gb|EDY88712.1| aspartyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 667

 Score =  578 bits (1491), Expect = e-163,   Method: Composition-based stats.
 Identities = 313/665 (47%), Positives = 407/665 (61%), Gaps = 73/665 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+C DL   +VG  VRLSGWVHRVR HGG++F+D+RDHYGITQV+A+PDS  F 
Sbjct: 1   MHAYRSHTCADLNKENVGDTVRLSGWVHRVRDHGGLLFIDLRDHYGITQVMADPDSPVFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR+EW + IDG V +R A  +N  + TG+IE+  + IE+L  A ELPL VFG++EY
Sbjct: 61  DIEKVRNEWCIRIDGEVKARDASLVNDKLPTGEIEVFIRDIEVLGAAAELPLMVFGDQEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE  R KYR+LDLRR+ + KN+  R+ +++SMR RM  + F E  TPI+T+SSPEGARDF
Sbjct: 121 PEETRLKYRYLDLRREKMQKNMKLRSDVVSSMRKRMWDKGFREFQTPIITSSSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           L+PSR++ G FYALPQAPQQ+KQL+M SG+D+YFQIAPCFRDEDPR+DR P +FYQLD+E
Sbjct: 181 LIPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ D+ +T++ V+ G+FEEF  G  V   + +I Y DA   YG+DKPDLRNPI M 
Sbjct: 241 MSFVEQQDVFDTIQPVITGIFEEFGKGRKVDQMWEQISYRDAALWYGSDKPDLRNPIKMQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN---RAFCDRMNEWARSQGQPGLA 357
            V+EHF  S F +F+K+L  +          KG  G    R FCDRMN +A+ +G PG+ 
Sbjct: 301 VVSEHFRGSGFAIFAKLLEQDGTEVRAIPAPKGPNGQPVGRKFCDRMNAFAQKEGLPGMG 360

Query: 358 YIFWRLDESGNVAGM--GPVAKHLNIVNTEAIRVR-----LDMQDGDSC-----FFIAGD 405
           YIFWR  ++        G +   + +   E +        ++ +DG+           GD
Sbjct: 361 YIFWREVKNLEWHPQVLGTILGWIEMGACENLTAEAILGGVNAKDGELFQSIVDLINNGD 420

Query: 406 ----------------PLKFCSFAA------------DARNHIA---------------- 421
                           P   C  A               R  +                 
Sbjct: 421 GLDLKRAKELASATYGPEFVCEAAGPLAKNIGPERTEAIRQQLGLTVGDAAFFLGGKPKT 480

Query: 422 -------------QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                         ELG+ + N F F WI+DFP YE + E  KIDF HNPF+MPQGGM +
Sbjct: 481 FETVAGKARAVIGDELGLTDLNRFAFVWIVDFPIYERDAETGKIDFEHNPFSMPQGGMAA 540

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           L G     +  FQYDL CNG+E+ SG IRNH  E+M +AF   G  K+ VE RFGG+  A
Sbjct: 541 LDGK-PEDVLGFQYDLACNGYELVSGAIRNHRPEIMFKAFEIAGYGKDEVEKRFGGMVNA 599

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           FQ G PPHGG AAG+DRIVMLL  A N+R+V +FPM+Q   DL+M +PS    EQ+REL 
Sbjct: 600 FQYGAPPHGGCAAGVDRIVMLLADADNLRDVIMFPMNQRAEDLMMSAPSEPQNEQMRELR 659

Query: 589 LRIVE 593
           LR++ 
Sbjct: 660 LRVIP 664


>gi|123967112|ref|YP_001012193.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|166225375|sp|A2BZ75|SYD_PROM5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123201478|gb|ABM73086.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 602

 Score =  578 bits (1491), Expect = e-163,   Method: Composition-based stats.
 Identities = 227/603 (37%), Positives = 346/603 (57%), Gaps = 20/603 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R   C +L  SD+G  V L GWV R R HGG+IF+D+RDH G  Q+  NP+     F+ A
Sbjct: 2   RNKICEELNKSDIGKEVNLCGWVDRRRDHGGVIFIDLRDHSGFMQITINPEDGETLFKQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           + +R+E V+ ++G+V  R  ++IN NIITG++EL  Q ++IL+  +     P+ V     
Sbjct: 62  EILRNETVIMVNGIVNERPKDSINKNIITGELELKVQDLQILNQIKNNLPFPVSVHDYEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR  L +N+  R +II ++R  +    F E  TP+LT S+PEGARD
Sbjct: 122 TKEELRLKYRYLDIRRGKLLENLKTRHKIIKAIRNYLDNSGFTEVETPLLTKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP+R++ G F+ALPQ+PQ +KQLLM  G D+Y+QIA CFRDED R+DR P EF QLD+
Sbjct: 182 FLVPARLSNGDFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV +++I+   E +++ +++   N N   + F R+ + +A+  YGTD+PD R  +++
Sbjct: 241 EMSFVSEEEIIAFNEKLIKHIWKNVLNINLNED-FPRMSWQEAMDNYGTDRPDTRYGMLL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
            N+ E   +  F +F+K + +    +   I       +         + + A+  G  GL
Sbjct: 300 KNLGEILGNIGFNIFTKAIQMGGAIKSITIKNGNSSISNVRIKPGGDIFKVAQEAGAGGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  + DE   +  +G +  +LN  +   I    + +DGD     AG            
Sbjct: 360 AFIRVKGDE---LETIGAIKNNLNKDHISNILKITEAEDGDLILLGAGSTKIVNQSLDRV 416

Query: 417 RNHIAQELGIIN----CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG---GMESL 469
           R +IA++L ++      + + F WI DFP +E NEEEK+ +  H+PF  P+      +  
Sbjct: 417 RQYIAKDLNLLENQKAQSQWNFLWITDFPMFEMNEEEKRFEALHHPFCSPKNVKFEDKKE 476

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
               + +  A+ YDLV NG E+  G +R H +E+  +    VG++   ++ +FG L  A 
Sbjct: 477 LTKKIETSTAYAYDLVLNGLELGGGSLRIHQAEMQKEVLRTVGLTDHQIDEKFGFLIEAL 536

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGGIA G+DRI ML+LG  ++RE   FP +Q    LL  +PS VS  QL+EL +
Sbjct: 537 EMGAPPHGGIAFGLDRITMLILGVDSIRETIAFPKNQQAKCLLTNAPSNVSKSQLKELDI 596

Query: 590 RIV 592
            I 
Sbjct: 597 EIT 599


>gi|71901605|ref|ZP_00683685.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella
           fastidiosa Ann-1]
 gi|71728615|gb|EAO30766.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella
           fastidiosa Ann-1]
          Length = 589

 Score =  578 bits (1491), Expect = e-163,   Method: Composition-based stats.
 Identities = 217/598 (36%), Positives = 325/598 (54%), Gaps = 19/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN------PDSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI Q+  +       +S  
Sbjct: 2   RTHFCGLINETLIGHTVTLAGWTDVARNLGGVCFIDLRDHEGIVQITVDSRAIDQNNSEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A  +  E VL ++G+V +R A  +N  I TG++E+ A KI+IL+ A    LP     
Sbjct: 62  FKVASGLSYEDVLQVEGVVRARHA--VNDKIKTGKVEVIATKIKILNKAAP--LPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E IR KYR+LDLRR  + +    R +++ ++R  +    F +  TPILT ++PEGAR
Sbjct: 118 NPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E ++R VF+E +    +   F R+ +++A+RR+G+DKPD+R  + 
Sbjct: 237 MEFAFVSERDVQDFVEEMIRRVFKEVAGIE-LDTTFPRMTWEEAMRRFGSDKPDMRINLE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V      S F  F+  ++   G         G   +R   D    +    G  GLAY
Sbjct: 296 LIDVAALVADSTFTPFTNAVAHPNGRVAALRIPSGAVLSRKQIDEYAAYTAKYGATGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                          P+AK  +     A+   +  + GD  FF AG+  K   F    R 
Sbjct: 356 AKLAPTG----EITSPIAKFFSEDAFAALLSHIGAEKGDIVFFGAGNYNKVSDFMGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSI 477
              ++  +I  + +   W+ DFP +EW+EE ++    H+PFT P              + 
Sbjct: 412 KAGKDFALITAD-WRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAINDIDELRAHARTA 470

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD+V NG EI  G IR H  E+    F  +GI+++    +FG L  A   G PPHG
Sbjct: 471 LSRGYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARAKFGFLLDALNYGAPPHG 530

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GIA GIDRI  L+ G +++R+V  FP +     L+  +PS +S EQL E+ + I + P
Sbjct: 531 GIAFGIDRIAALIAGTESIRDVIPFPKTTGAQCLMTDAPSPISEEQLSEIHV-ITKKP 587


>gi|159904361|ref|YP_001551705.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|238687134|sp|A9BDD8|SYD_PROM4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|159889537|gb|ABX09751.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 606

 Score =  578 bits (1491), Expect = e-163,   Method: Composition-based stats.
 Identities = 225/602 (37%), Positives = 340/602 (56%), Gaps = 22/602 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           R++ CG L    + S V+L GWV R R HGG+IF+D+RD  G  Q+  +PD     F IA
Sbjct: 2   RSNYCGALRNEHINSKVQLCGWVDRCRDHGGVIFIDLRDSSGTMQITVDPDQGTDLFNIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGERE 119
           +S+++E V+ + G V SR  E+IN  + TGQIE+ A  +++L+         + V  +  
Sbjct: 62  ESLKNETVIQVTGKVRSRPEESINKKLETGQIEVLADVLKVLNPVYGNLPFAVSVHDDEP 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR K+R+LDLRR+ + KN+  R   I + R  +  E FIE  TPILT S+PEGARD
Sbjct: 122 LKEEIRLKHRYLDLRRERMKKNLHLRHATIQTARNFLEEEGFIEVETPILTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV +G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED RSDR P EF QLDM
Sbjct: 182 YLVPSRVCEGEWFALPQSPQIFKQLLMVGGIERYYQVARCFRDEDLRSDRQP-EFTQLDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ Q++IL   E ++  ++++    +     F R+ + +++ RYGTD+PD R  + +
Sbjct: 241 EMSFMSQEEILCLNERLIACIWKKIKGKDI-KVPFPRLSWQESMDRYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC----DRMNEWARSQGQPG 355
            +V+       F+VFS  +      +   +       +        D  NE A+  G  G
Sbjct: 300 VDVSSIVKDIGFKVFSGAIQAGGSVKCIKVEEGNQSISNVRIKPGGDVFNE-AQKAGAKG 358

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LA+I  R++    +  +G +  +LN      + ++   + GD   F AGD          
Sbjct: 359 LAFIRVRVN--NEIDTIGAIKDNLNNQQKNELLLKTKAKPGDLILFAAGDTEIVHKTLDK 416

Query: 416 ARNHIAQELGIIN----CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGME 467
            R  +A+EL +I+     + + F W++DFP + +N++EK+ +  H+PF  P     GG  
Sbjct: 417 VRQFLAKELRLISTGKSKDQWNFLWVIDFPMFNFNKDEKRHEAMHHPFCAPNAKDIGGDP 476

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
            L   +L   +A  YDLV NG E+  G +R H  E+  +    +GI+K+    +FG L  
Sbjct: 477 GLWEENLPKARAQAYDLVLNGLELGGGSLRIHNPELQQKVLETIGIAKDEATEQFGFLLN 536

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           A + G PPHGG+A G+DRIVMLL    ++R+   FP +Q    L+  +P+ VS  QL+EL
Sbjct: 537 ALEMGAPPHGGLAFGLDRIVMLLSEEDSIRDTIAFPKTQQARCLMAQAPNEVSKRQLKEL 596

Query: 588 GL 589
            +
Sbjct: 597 HI 598


>gi|284100718|ref|ZP_06386006.1| aspartyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
 gi|283830374|gb|EFC34595.1| aspartyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
          Length = 565

 Score =  578 bits (1490), Expect = e-163,   Method: Composition-based stats.
 Identities = 230/570 (40%), Positives = 339/570 (59%), Gaps = 11/570 (1%)

Query: 24  SGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            GWVH  R HGG++F+D+RD +G+TQ+V +   D A  E A  +R+E+V+   G V  R 
Sbjct: 1   MGWVHGRRDHGGVLFIDVRDRFGVTQLVFDVEKDQATHEQANELRNEFVIAATGTVRLRP 60

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            ++IN  I TG+IE+    +E+L+ A   P  +  + +  E++R K+R+LDLRR  + + 
Sbjct: 61  EDSINPQITTGEIEIQVGVLEVLNRAHTPPFLIEDDSQATEALRLKHRYLDLRRPPMQRL 120

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +  R  +    R  +    F+E  TPILT S+PEGARD+LVPSRVNQG+F+ALPQ+PQ +
Sbjct: 121 LALRHDVTYRTRQFLHERRFLEIETPILTKSTPEGARDYLVPSRVNQGAFFALPQSPQLF 180

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQ+LM  G DRYFQIA CFRDED R DR P EF Q+D+EMSFVE+DD++N  E +LR V 
Sbjct: 181 KQILMVGGADRYFQIARCFRDEDLRLDRQP-EFTQIDLEMSFVERDDVMNLTEELLRLVC 239

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
           +E +   ++ + F R+ Y +A+ RYGTDKPD R  + +H++ E   H EF+VF   +   
Sbjct: 240 KETAGI-SLPSPFPRLTYQEAMSRYGTDKPDRRFGLELHDLNEVAKHVEFKVFRDTVEKG 298

Query: 322 PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNI 381
                  +   G    R+  DR+ E A+  G  GLA++  ++ E   +     +AK L+ 
Sbjct: 299 GQVSGLVVK-GGADIARSRIDRLIEVAKGFGAKGLAWV--KIIEGWQLE--SAIAKFLDA 353

Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFP 441
              +      D   GD   F+A  P          R+++  EL +I+ + +E  W+ DFP
Sbjct: 354 ALFQQ--ALPDAGPGDLLLFVADKPAVTYEVLGRLRSYLGVELELIDHDRWEPVWVTDFP 411

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E++  E++    H+PFT P+        +D L   A  YD+V NGFEI  G IR H S
Sbjct: 412 MFEYDAAEQRYVALHHPFTSPRMDDLPNLDSDPLHAHAQAYDVVLNGFEIGGGSIRIHGS 471

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E+  + F  +GIS++  + +FG L  A + G PPHGGIA G+DR+VMLL  A+++REV  
Sbjct: 472 ELQHKVFKLLGISRDAAQEKFGFLLDALEYGAPPHGGIALGLDRLVMLLGKAESIREVIP 531

Query: 562 FPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           FP +Q    L+  +PS V   QL+ELG+++
Sbjct: 532 FPKTQKVQCLMTEAPSDVGQTQLKELGIKL 561


>gi|302336148|ref|YP_003801355.1| aspartyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319988|gb|ADK68475.1| aspartyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 589

 Score =  578 bits (1490), Expect = e-162,   Method: Composition-based stats.
 Identities = 228/594 (38%), Positives = 336/594 (56%), Gaps = 11/594 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--- 58
           H   TH+CG+L   D+G  V L+GWV   R HGG+IF+D+RD  G+TQV  +P+ +    
Sbjct: 4   HSMHTHTCGELRREDIGREVALTGWVWHRRDHGGLIFVDLRDRAGVTQVSFDPEHSGGIA 63

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F  A+++RSEW + + G V  R     N  + TGQIE+   +IE+L+ A      +    
Sbjct: 64  FHTAETIRSEWPIKVVGTVRERPEGQANEKLATGQIEVLVSEIEVLNTARTPAFQIEDHV 123

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E +R +YR+LD+RR  +  N+  R+    ++R  +    F+E  TP L  S+PEGAR
Sbjct: 124 DAAEDVRLRYRYLDIRRPKMMANLRLRSDFTFAIRQALHDRAFMEVETPALFKSTPEGAR 183

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR   G FYALPQ+PQ  KQLLM  G +RY+Q+A CFRDED R+DR P EF Q+D
Sbjct: 184 DFLVPSRTQPGHFYALPQSPQLLKQLLMVGGVERYYQVAKCFRDEDLRADRQP-EFTQVD 242

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVEQDD++  +E+VL   F +      +     R+ Y +A+  YGTDKPD R  + 
Sbjct: 243 VEMSFVEQDDVMAALEDVLAEAFSKVG--VQMQLPLRRLPYWEAMDTYGTDKPDTRFGME 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +H+VT+ F  S+F++FS   +    Y         G   RA  D++ + A + G  GLAY
Sbjct: 301 LHDVTQIFSSSKFKLFSSAATDPKTYVKAINAKGAGKWPRAQIDKLADVASAFGARGLAY 360

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +R D     +   P+ K  +     A+R  +D++ GD   F     L         R+
Sbjct: 361 IAFREDG----SVTSPIVKFFSDEEMAALRAEMDVEPGDLVMFAVEGRLAADEILGGMRS 416

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           H+A  LG++     +F W++DFP + W+E+       H PFT P      L   D LS+ 
Sbjct: 417 HMADALGLVREG-HDFLWVVDFPLFHWDEDRGAYAAEHQPFTQPMEADVELLDADPLSVG 475

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD V +GFE   GG+R H +++ ++    +G ++E    +FG L  A + G PP GG
Sbjct: 476 SHTYDFVMDGFEAGGGGMRIHDADLQMRILEKLGFTEERAREQFGFLMEALKFGAPPMGG 535

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            A G+DR+ MLL G+ ++REV  FP + +  DL+  +P  VS  QL+E+ LR++
Sbjct: 536 FALGLDRVCMLLAGSDSIREVMAFPKTSSGSDLMSDAPGEVSGRQLKEVSLRLL 589


>gi|300087788|ref|YP_003758310.1| aspartyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527521|gb|ADJ25989.1| aspartyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 598

 Score =  578 bits (1490), Expect = e-162,   Method: Composition-based stats.
 Identities = 226/599 (37%), Positives = 338/599 (56%), Gaps = 11/599 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           ++H CG+L  + +  +V L+GWVHR R HG +IF+D+RD  GI QVV NP+       +A
Sbjct: 3   KSHQCGELTANHIDKYVTLAGWVHRRRDHGNLIFIDLRDSSGIVQVVFNPEKAEQAHHLA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +++R+E+V+ + G V  R   T NA +ITG +E+ A  +EIL+ +   P  +  + +  E
Sbjct: 63  ETLRNEYVIKLAGAVSRRPEGTENARMITGLVEVMADSLEILNPSRTPPFYINEDADIDE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S+R KYR+LDLRR  +  N+  R +IIN MR  + A  F+E  TP+L  S+PEGARD+LV
Sbjct: 123 SLRLKYRYLDLRRSRMAANLRLRHQIINHMRQYLDARGFLEVETPVLLKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FY+L Q+PQQ KQLLM +G ++Y+QIA CFRDED R+DR P EF QLD+EMS
Sbjct: 183 PSRVYPGKFYSLAQSPQQLKQLLMVAGVEKYYQIARCFRDEDLRADRQP-EFTQLDLEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++D++  +E +   + +  +    +   F R+ + D   R+G+DKPD+R  + +  +
Sbjct: 242 FVDEEDMMELLEGLFTSLVQTVTPEKKLIQPFPRLDFADITERFGSDKPDIRFGMELTEI 301

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+    S F VFS   +     +    P  GG  N+   + + + ++  G  GL  I   
Sbjct: 302 TDIVRDSSFGVFSGTAAKGGVIKAINAPGCGG-YNKKQLEELIDKSKQAGAAGLVPISLG 360

Query: 363 LDESGNVAGM------GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
             E G++  +         AK+L       I  RL  + GD    +A             
Sbjct: 361 A-EPGDIEALTFEQVKSVAAKYLTFEQISEIARRLSAKPGDLLLVVADRREVVNHVLGVL 419

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  +   L + + N   F ++  FP + W+EEEK+    H+PFT P+     L  +D  S
Sbjct: 420 RAELGSRLDLADPNELVFAFVTGFPLFTWDEEEKRWQATHHPFTSPRETDLPLLESDPGS 479

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +    YDL+ NG+EIA G IR H   +  + F  +G S+E +++ FG L  AF+ G PPH
Sbjct: 480 VHGRHYDLILNGYEIAGGSIRIHRPGLQRRVFEILGHSEERIQSLFGQLLDAFEYGAPPH 539

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GG+A GIDR+V +L G   +REV  FP +Q   D + GSPS VS  QL ++ + +    
Sbjct: 540 GGVAPGIDRVVAILAGEPTIREVIAFPKNQAGIDPMFGSPSEVSRSQLDQVHISLNTKE 598


>gi|225011293|ref|ZP_03701749.1| aspartyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225004549|gb|EEG42515.1| aspartyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 586

 Score =  578 bits (1489), Expect = e-162,   Method: Composition-based stats.
 Identities = 216/600 (36%), Positives = 326/600 (54%), Gaps = 19/600 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
            YR+H CG L   ++G  V LSGWV +VR  G I ++D+RD YGITQ++ + + +  E+ 
Sbjct: 1   MYRSHHCGALSAKEIGQTVHLSGWVQKVRDKGFIGWVDLRDRYGITQLIFDAERSAPELL 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             AK +  E V+ I G V++R  +  N  + TG IE+  +++++L+ ++  P  +  + +
Sbjct: 61  QAAKELGRETVINITGEVIAR--DNANPQMPTGAIEILVKELKVLNKSKTPPFTIEDQTD 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LD+RR+ + +N++ R ++   +R  +  + FI+  TP L  S+PEGARD
Sbjct: 119 GGEELRAKYRYLDIRRNPVKENLIFRHKVSMEVRKFLSDQGFIDIETPYLIKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N G FYALPQ+PQ +KQLLM  G D+YFQI  CFRDED R+DR P EF Q+D 
Sbjct: 179 FVVPSRMNPGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQP-EFTQIDC 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EM+FV Q+DILN  E + + +  E    +  S  F R+ Y  A++ YG DKPD+R  +  
Sbjct: 238 EMAFVTQEDILNVFEGLTKHLLREIHGIDITS--FPRMTYAHAMKTYGNDKPDIRFGMEF 295

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLA 357
             +     H EF VF+            AIP       R   D + +W +    G  GL 
Sbjct: 296 AELNALAQHREFPVFNAA----ELVVGIAIP-GANNYTRKEIDALIDWVKRPQVGAKGLV 350

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y   R +E G  +    V K  +  +  A     + Q GD    ++GD     +  +  R
Sbjct: 351 YA--RCNEDG--SYKSSVDKFYDQEDLAAWAKATNAQAGDLICVLSGDTDTTRAQLSALR 406

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A  LG+ +   F   W++DFP  E + E       H+PFT P+     L   D  ++
Sbjct: 407 MEMATRLGLRDPKVFAPLWVIDFPLLEKDPETGHFHAMHHPFTAPKPEHLDLLDTDPAAV 466

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YDLV NG EI  G IR H      +  + +G S+   + +FG L  AF+ G PPHG
Sbjct: 467 NANAYDLVLNGNEIGGGSIRIHDKNTQSKMLALLGFSEAEAKAQFGFLMDAFEYGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+A G+DR+V +L G + +RE   FP +    D+++ +P+ +   QL EL L    +  +
Sbjct: 527 GLAFGLDRLVAILGGQETIREFIAFPKNNAGRDVMIDAPAALDQAQLDELFLDSKAHKAQ 586


>gi|268609348|ref|ZP_06143075.1| aspartyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 592

 Score =  578 bits (1489), Expect = e-162,   Method: Composition-based stats.
 Identities = 221/596 (37%), Positives = 330/596 (55%), Gaps = 14/596 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RTH CGD+   ++G  V + G+V RVR  GG+IF+ +RD  G+ Q++ N   D A FE 
Sbjct: 9   KRTHYCGDVT--EIGKEVVVGGFVERVRDKGGVIFIVLRDRTGVVQLLFNETTDKAIFEK 66

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S RSE VL + G V  R  E+ N  + TG +E+    + +LS AE  P  +  E +  
Sbjct: 67  ASSCRSEDVLMVKGEVRER--ESKNDKLKTGHVEIFVTDLRVLSKAETPPFEITAETKVN 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR+ L +NI+ R  I    R       F+E  TP++  S+PEGARD+L
Sbjct: 125 EELRLKYRYLDLRREPLQRNIIMRHEIAKVTREYFYENGFLEIETPMMMKSTPEGARDYL 184

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           +PSRV+ G FYALPQ+PQ YKQLLM +G+DRY Q+A CFRDED R+DR P EF Q+D+EM
Sbjct: 185 IPSRVHPGKFYALPQSPQIYKQLLMIAGYDRYIQLARCFRDEDLRADRQP-EFTQIDLEM 243

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ +DI   +E  ++ VF+E    + V     R+ + DA+ RYG+DKPD R    + +
Sbjct: 244 SFVDAEDIQECVEGFIQRVFKEVMGVD-VPTPLPRLTFADAMNRYGSDKPDTRFGFEIQD 302

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T+     +F VF   +          +        R   D++ + A+  G  GLAYI W
Sbjct: 303 ITDTVKDIDFVVFKSAIEDGSSVRAINVKNGAAAYTRKEIDKLVDHAKGIGAKGLAYIRW 362

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                          K L   + E I   +D Q GD     A       S     R   A
Sbjct: 363 AD------EPNCSFKKFLADGDLEKICSAVDAQQGDLVLICADKTKTVLSTLGAIRLICA 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +I  + + F WI + PF+E++E+      AH+PFTMP         +D  +++A  
Sbjct: 417 KKLDVIPEDQYNFLWITEMPFFEYDEDNNTWVAAHHPFTMPMEECLDYLDSDPANVRAKA 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DLV NG E++SG +R    E+  + F  +G++ E ++ +FG L  A++   PPHGG+  
Sbjct: 477 WDLVLNGTELSSGSMRITDFELQQKMFEALGMTDEEIQAKFGFLVDAYRYAAPPHGGMGI 536

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+DR+ M++  A ++R+V+ FP  QN  +++   PSTV  + L  LG+ +    ++
Sbjct: 537 GLDRLAMIMCKADSLRDVTAFPKVQNASEIMSECPSTVDKDSLDILGIAVTAKEEE 592


>gi|217077880|ref|YP_002335598.1| aspartyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|226736545|sp|B7IE30|SYD_THEAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|217037735|gb|ACJ76257.1| aspartyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 581

 Score =  578 bits (1489), Expect = e-162,   Method: Composition-based stats.
 Identities = 235/590 (39%), Positives = 344/590 (58%), Gaps = 21/590 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YRTH+CG+L + DVG  V LSGWV R+R  GGI F+ +RD YG+TQVV NP+S  +EI+
Sbjct: 1   MYRTHTCGELNIKDVGKKVVLSGWVDRIRDLGGIKFIILRDRYGVTQVVVNPESPAYEIS 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +  EWV+ I+G V  R   T      TG+IE+  +KI +LS AE    P +   +  E
Sbjct: 61  QKIGREWVIQIEGTVSERPESTK-TETQTGEIEVIVEKINVLSKAE--LPPFYPGDKVSE 117

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   ++KN++ R ++  + R  +    F+E  TP LT S+PEGARDFLV
Sbjct: 118 DLRLKYRYLDLRDKNMNKNLIIRHKMAQAAREFLNKHGFLEIETPYLTKSTPEGARDFLV 177

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+ +G FYALPQ+PQ +KQLLM SGFD+Y+Q A CFRDED R+DR P EF Q+D+EMS
Sbjct: 178 PSRLQKGKFYALPQSPQLFKQLLMVSGFDKYYQFARCFRDEDLRADRQP-EFTQIDIEMS 236

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE +D++N MEN +R V+        +   F RI YD+A+  YG+DKPD R  + + ++
Sbjct: 237 FVEMEDVINLMENFVRYVYSSVG--IKLPEKFDRITYDEAMEIYGSDKPDRRFGMELKDL 294

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T +F  ++F++   +++     + +         +R     +  + +  G  GL +    
Sbjct: 295 TNYFKDTDFKIIKNVINNGGSIKGFITQIP---ISRKIASELESYVKEFGLGGLLWFKL- 350

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-IAGDPLKFCSFAADARNHIA 421
             E+G ++   P  K L     E I    +++DGD        +  +  +     R  IA
Sbjct: 351 --ENGEIS--SPTNKFLGGSY-ENISKDYNLKDGDVVLLAAHTNREQLNTALGALRLRIA 405

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +E        F+  W++DFPF EWNEEEK+    H+PFTMP+        +    IKA+ 
Sbjct: 406 KEHFKNLEEGFDALWVVDFPFLEWNEEEKRYVARHHPFTMPKN-----IDSKPEDIKAYA 460

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD++ NG EI  G IR H SE+  + F  +G++ +  E +FG L  A + G PPHGGIA 
Sbjct: 461 YDMILNGNEIGGGSIRIHNSEIQRKVFEIIGLTNKEAEEKFGFLLEALKYGAPPHGGIAF 520

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G DR+V + L   ++R+V  FP + +    L G+PS+V   QL EL +++
Sbjct: 521 GFDRMVSIALRTSSIRDVIAFPKTTSGTCQLTGAPSSVDKSQLEELSIKL 570


>gi|323144092|ref|ZP_08078733.1| aspartate--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322416134|gb|EFY06827.1| aspartate--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 587

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 207/593 (34%), Positives = 323/593 (54%), Gaps = 8/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           R+  C ++  + V   V L GWV+R R  GG+IF+D+RD  GI QVV  PD+      A 
Sbjct: 2   RSLYCAEVNSAHVSEQVTLCGWVNRRRDLGGLIFIDLRDRSGIVQVVFEPDNHDLHAKAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R E+ + + G V +R A+ +N+ + TG+IE+ A  + I + +    LP+   ++  E 
Sbjct: 62  TLRGEYCIKVVGSVKARPADQVNSKMATGEIEVYATDLTIFNKSAP--LPIDFNQDNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR  +   +  R  I   +R  + A  F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLRYRYLDLRRPEMVHKMTVRAYITRYVRHFLDAHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR++ G FYALPQ+PQ +KQLLM +G+DRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRIHHGKFYALPQSPQLFKQLLMIAGYDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   D+ + ME ++ G+F+E +  +        + YD+A+ R+G+DKPDLR    +H + 
Sbjct: 239 MTSQDVRDIMEEMMVGLFKEVAGYDLGKL--PVMRYDEAMERFGSDKPDLRISYELHTLC 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   +SEF+V S   +      V      G    R   D   ++ +  G  GL +I    
Sbjct: 297 DAVRNSEFKVLSAPANDPDSRVVGFAVPGGAAMTRREIDGYTDFVKKLGASGLIWIKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G       +AKH+      ++    + + GD  F  AG   K  +     R   A++
Sbjct: 357 LEKGAEGLHSSIAKHVTPDELISLVTMANGKSGDIVFIGAGKHNKISTVMGALRLQTAKD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G++  + ++  W++DFP +E  EE   +   H+PFT P G        + +S+ A  YD
Sbjct: 417 KGLV-ADGYKALWVIDFPMFEMTEEAG-LTAMHHPFTAPSGVTPEELIANPMSVYADAYD 474

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG+E   G +R +   +    F  +GI+      +FG L  A   G PPH G+A G+
Sbjct: 475 LVINGYESGGGSVRIYDENMQQAVFKVLGITDSEAREKFGFLLDALSFGAPPHAGLAFGL 534

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+ MLL G  N+R+V  FP +     L+  +P+  S + L+EL + I +  +
Sbjct: 535 DRVTMLLTGTDNIRDVIAFPKTTAAACLMTQAPNVASPDALKELAIAITDMEQ 587


>gi|317181930|dbj|BAJ59714.1| aspartyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 577

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 219/591 (37%), Positives = 338/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DV   ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVDKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYERALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +  + R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALTARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+     + +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAIG--HNISKPFKRMSYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFMDSSNAIFSNIAQDPKNKRIKALNVKGADTIFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  + D + GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILEKTDAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|257784225|ref|YP_003179442.1| aspartyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472732|gb|ACV50851.1| aspartyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 608

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 222/596 (37%), Positives = 341/596 (57%), Gaps = 10/596 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--F 59
           H   TH+CG+L    +G  V L+GWV R R  GG+IF+D+RD  G+TQ++ +PD     F
Sbjct: 20  HSMHTHTCGELRAEHIGQTVTLTGWVWRRRDFGGLIFVDLRDREGLTQILFDPDVNADVF 79

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+++R EW + I G V  RS    N  ++TG++E+ A KI++L+ +   P  +    +
Sbjct: 80  ATAETIRPEWPVLITGTVQHRSEGQTNEALVTGEVEVLASKIDVLNTSAVPPFQIENHID 139

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR++DLRR  + +N+  R+    ++R      +F E  TP L  S+PEGARD
Sbjct: 140 VNEDLRLKYRYVDLRRPQMAQNLRLRSDFAFALREAFHKRDFTEVETPALFKSTPEGARD 199

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR+  G+FYALPQ+PQ  KQLLM  G +RY+QI  CFRDED R+DR P EF Q+DM
Sbjct: 200 FLVPSRMQGGNFYALPQSPQLLKQLLMIGGVERYYQITKCFRDEDLRADRQP-EFTQVDM 258

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV +DD+++ +E++L   F +            +I Y DA+  YG+DKPD R  + +
Sbjct: 259 EMSFVREDDVMSELEDILGDAFAKMG--IEFPTPLRKIQYWDAMDTYGSDKPDTRIGMEL 316

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           H+V+  F  S F++FS   +    +         G   R+  D++ E A   G  GLA++
Sbjct: 317 HDVSGVFAQSGFKLFSSAANTEGQFVKAINVKGAGTWPRSQVDKLAEVAAGFGAKGLAWV 376

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            ++  E G+V   GP+ K  +    EA+R  +  +  D   F  G  L+        R H
Sbjct: 377 AFK--EDGSVG--GPITKFFSPEELEALRAEMSAEPKDLILFAVGGRLETDEILGGMRLH 432

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+ L  +     +F W+++FP + W+EE +     H PFT+P+     L   + L++ +
Sbjct: 433 MARVLE-VPREGHDFLWVVNFPLFHWDEETQSYASEHQPFTLPREEELDLLDTNPLAMGS 491

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           + YD V +GFE   GG+R H +++ L+    +G ++E  + +FG L  A   G PP GG 
Sbjct: 492 YTYDFVMDGFEAGGGGMRIHNADLQLKILEKLGFTEERAKAQFGFLMEALTFGAPPMGGF 551

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G+DR+ MLL G+ ++R+V  FP + +  DL+  +PS VS EQL+E+ L+ +   
Sbjct: 552 ALGLDRVCMLLTGSDSIRDVMAFPKTTSGSDLMSSAPSPVSNEQLKEVSLQTLPKE 607


>gi|118590155|ref|ZP_01547558.1| aspartyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118437127|gb|EAV43765.1| aspartyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 655

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 328/653 (50%), Positives = 426/653 (65%), Gaps = 65/653 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YR+H+CGDL +SD G  +RLSGWVHRVR HGG++F+D+RDHYG+TQ V +PDSA F+
Sbjct: 1   MHPYRSHTCGDLRLSDEGQTIRLSGWVHRVRDHGGVLFIDLRDHYGVTQCVVDPDSAAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VRSEW + IDG V  R+ ETIN ++ TG IE+  +++EIL  A+ELPLPVFG+ EY
Sbjct: 61  LAETVRSEWCIRIDGNVKKRTDETINPDLPTGDIEVFIREMEILGAAKELPLPVFGDLEY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+ LH+N++ R+ ++  +R RM    F E  TPI+TASSPEGARDF
Sbjct: 121 PEEVRLKYRFLDLRREKLHQNMILRSNVVRDLRDRMWNIGFNEFQTPIITASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDEDPR+DR P +FYQLDME
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q D+ +T+E V+ G FE F NG  V+ N+ +I Y D+   YGTDKPDLRNPI M 
Sbjct: 241 MSFVTQQDVFDTIEPVIAGCFERFGNGRPVNRNWPQISYKDSALWYGTDKPDLRNPIKME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            V+EHF  S F +F+ +L   PG E+ AIPA  GG +R FCDRMN++A+ QG PG+ YIF
Sbjct: 301 IVSEHFAGSGFAIFANLLE-QPGTEIRAIPAPKGG-SRKFCDRMNKFAQEQGLPGMGYIF 358

Query: 361 WRLDESGN------------------VAGMGPV---AKHLNIVNTEAIRVRLDMQDGDSC 399
           WR +                       +G  P+    K  NI  +  +++   +Q+  + 
Sbjct: 359 WRANAEKVADEDFINRIASVHDDVIAESGGTPIDEGQKLSNIDVSLLVKMLQRLQENGNV 418

Query: 400 FFIAGDPLKFCSFAADARNHIA--------QELGI------------------------- 426
                   K+   A     +I         ++L +                         
Sbjct: 419 SEAEALFSKYMEAAGPLAKNIGSERTEAIRKQLNLDIGDAVFFLGGKPKQFEPVAAKARV 478

Query: 427 --------INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
                    + + FEF WI+DFP YE +EE  +IDF+HNPF+MPQGGME+L+G D L + 
Sbjct: 479 IIGEELGHTDKDRFEFAWIVDFPIYERDEETGEIDFSHNPFSMPQGGMEALEG-DPLDVL 537

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            +QYDL CNG E+ SG IRNH  E+M +AF   G   E V+ RFGG+  AFQ G PPHGG
Sbjct: 538 GYQYDLACNGHELISGAIRNHKPEIMYKAFEIAGYPAEEVDRRFGGMVNAFQYGAPPHGG 597

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            AAGIDR+VML+    N+REV LFPM+Q   DL+MG+PS  +  QLR+L LR+
Sbjct: 598 CAAGIDRMVMLMADEANIREVMLFPMNQKAEDLMMGAPSEPTSAQLRDLHLRL 650


>gi|317012431|gb|ADU83039.1| aspartyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 577

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 220/591 (37%), Positives = 338/591 (57%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S+ ++ A  
Sbjct: 2   RSHFCTEISEKDVGKIIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSSAYKKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKSVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++DD++  +E++L+ +F+     + +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DEDDVMGVVEDLLQEIFKAIG--HDISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F  S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFRDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E V+ +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEVQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|297621745|ref|YP_003709882.1| Aspartyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297377046|gb|ADI38876.1| Aspartyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 592

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 228/598 (38%), Positives = 339/598 (56%), Gaps = 12/598 (2%)

Query: 1   MHRYR-THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC- 58
           M  YR TH+CG L  SDV   V LSGWVHR R HGG+IF+D+RD +GITQ+V NP++   
Sbjct: 1   MFDYRRTHNCGTLRKSDVERSVTLSGWVHRRRDHGGLIFIDLRDRFGITQLVFNPETRPE 60

Query: 59  -FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFG 116
            F  A+ +RSEWV+ + G V+ R+    N  + TG+IE+   ++E+LS A          
Sbjct: 61  LFSNAEKLRSEWVISVKGTVIPRAEGMANPRLETGEIEVDIHEMEVLSKANTPPFSICDD 120

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             E  E IR KYR+LD+RR  +  ++V R +++ ++R  +  + FIE STPIL  S+PEG
Sbjct: 121 FIEANEEIRLKYRYLDIRRGKIKDHLVLRHKVMQTVRNVLNCQEFIEISTPILGKSTPEG 180

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR++ G+FYALPQ+PQ +KQLLM +G DRYFQIAPCFRDED R+DR P EF Q
Sbjct: 181 ARDYLVPSRIHPGTFYALPQSPQLFKQLLMVAGMDRYFQIAPCFRDEDLRADRQP-EFTQ 239

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +D+EMSF   +D+LN +E +++ +F++          F R+ Y D + R+GTD+PD R  
Sbjct: 240 IDIEMSFGTPEDLLNIIEEMVKKIFKDCLGLEI-KIPFRRLPYKDCMDRFGTDRPDTRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           + +  + +    SEF VF   L      +   +   G   +R   ++   +    G  GL
Sbjct: 299 MELSTINDIAKRSEFSVFKNQLDNGGTIKAICVK-GGAEISRREIEQYTNFVGRLGIKGL 357

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A++  +            + K  +    + +  RL + +GD  F I              
Sbjct: 358 AWMKMQEGA-----LASNIVKFFSPELQKELIERLQVDEGDLIFMIGDSVELVNQGLDHL 412

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  IAQ+  +   +  +F W+ DFP +  + E  +++  H+PFT P      L  +D L 
Sbjct: 413 RRKIAQDRKLAADDHLDFLWVTDFPLFGKDAETGRLESLHHPFTSPHVEDMHLLDSDPLH 472

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++++ YDLV NG+EI  G  R H   +  + F  + I+ E    +FG    A + G PPH
Sbjct: 473 VRSYGYDLVLNGYEIGGGSQRIHDQSLQKKIFDLLQITPEEQNEKFGFFLEALKYGTPPH 532

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            GIA G+DR++ML+    N+REV  FP +Q   DL+   PS V+ +QLR+L L + ++
Sbjct: 533 LGIALGLDRLIMLMAQTDNIREVIAFPKTQKASDLMNQCPSPVAEDQLRDLHLSVTDD 590


>gi|291458448|ref|ZP_06597838.1| aspartate--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418981|gb|EFE92700.1| aspartate--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 582

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 220/585 (37%), Positives = 329/585 (56%), Gaps = 13/585 (2%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCI 73
           +G  V + GWV + R  GG+IF D+RD  GI Q++          FE A  +RSE+V+ +
Sbjct: 2   IGQEVTMMGWVQKSRNKGGLIFTDLRDRSGILQILFEEKDCGQEVFEKAARLRSEFVIAV 61

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V SR  + INA + TG IELSA+++ ILS +E  P P+       E +R KYR+LDL
Sbjct: 62  SGIVQSR-GKDINAELSTGSIELSARELRILSESEVPPFPIEDGIRTKEELRLKYRYLDL 120

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           RR  L K I+ R RI   +R  +    F+E  TP L  S+PEGARDFLVPSR++ GSFYA
Sbjct: 121 RRPELQKRIMTRARISFLIRRFLTENGFLEIETPTLIKSTPEGARDFLVPSRLHHGSFYA 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           LPQ+PQ  KQLLM SG DRYFQ+A C+RDED R+DR P EF Q+DME+SF + +D+L   
Sbjct: 181 LPQSPQLLKQLLMVSGMDRYFQLARCYRDEDLRADRQP-EFTQVDMELSFADVEDVLELN 239

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           E +L+ +F E      ++    R+ + DA+  YG+DKPDLR  + + ++TE      F V
Sbjct: 240 ERLLQFIFREVCGVE-LTLPLRRMRWIDAMNDYGSDKPDLRFGMKLMDLTELLRDCGFSV 298

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMG 373
           FS  +      +   +P  G G  R   D   ++ +  G  GLAY+    D     +   
Sbjct: 299 FSDCVREGGIIKGLKLP-GGAGMPRKKIDAYTDFVKECGAKGLAYLSLMEDG----SCKS 353

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHIAQELGIINCNCF 432
             AK L     E I   +  + GD  F +   D     +     R  + ++  +I+   +
Sbjct: 354 SFAKFLREGEKERICEAMRAKAGDLLFLVSDRDRRVVWNSLGALRLSLGRDFSLIDEKAW 413

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
            F W+ +FP +E++EE  +    H+PFTMP      L   D  +++A  YD+V NG E+ 
Sbjct: 414 SFLWVTEFPMFEYSEELGRFQAMHHPFTMPMEEDLPLLDTDPGAVRAKAYDIVLNGTELG 473

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G +R H +EV  +    +G ++E    +FG L +AF+ G+PPH G+A G+DR+ M ++G
Sbjct: 474 GGSVRIHQAEVQERMLEKLGFTRERAMEQFGFLMQAFRYGVPPHAGLAYGLDRLAMWMVG 533

Query: 553 AKNVREVSLFPMSQNFCDLLMGSPSTV-SVEQLRELGLRIVENPK 596
           +  +R+V  FP  ++  D +M +P+ V   +QL +LG+ + +  +
Sbjct: 534 SDTIRDVIAFPKGKDGSDAMMEAPAPVFEEQQLLDLGIVVSDREE 578


>gi|327481500|gb|AEA84810.1| aspartyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 558

 Score =  577 bits (1486), Expect = e-162,   Method: Composition-based stats.
 Identities = 215/562 (38%), Positives = 321/562 (57%), Gaps = 7/562 (1%)

Query: 36  IIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI 94
           +IFLD+RD  G+ QVV +PD    F  A  VRSE+V+ + G V  R A  +N NI +G I
Sbjct: 1   MIFLDVRDREGLAQVVFDPDRAETFATADRVRSEYVIKVTGKVRLRPAGAVNPNIASGAI 60

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRC 154
           E+   ++E+L+ AE  P P+    +  E  R +YRF+DLRR  + + +  R+RI  S+R 
Sbjct: 61  EVLGYELEVLNDAETPPFPLNEYSDVGEETRLRYRFIDLRRPEMAEKLKLRSRITASIRR 120

Query: 155 RMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
            +    F++  TPIL   +PEGARD+LVPSR + G+F+ALPQ+PQ +KQLLM +GFDRY+
Sbjct: 121 YLDENGFLDVETPILGRPTPEGARDYLVPSRTHAGNFFALPQSPQLFKQLLMVAGFDRYY 180

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           QIA CFRDED R+DR P EF Q+D+E SF+++ DI+   E ++R +F+E  +       F
Sbjct: 181 QIAKCFRDEDLRADRQP-EFTQIDIETSFLDEADIIGITEGMIRKLFKEVLDLEFGE--F 237

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
             + +++A+RRYG+DKPDLR P+ + +V +     EF+VFS   +   G           
Sbjct: 238 PHMPFEEAMRRYGSDKPDLRIPLELVDVADQLNAVEFKVFSGPANDPKGRVAALRVPGAA 297

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
              R+  D   ++    G  GLAYI       G      P+ K +   N   I  R+   
Sbjct: 298 SMPRSQIDDYTKFVGIYGAKGLAYIKVNERAKGVEGLQSPIVKFIPEDNLNVILDRVGAV 357

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
           DGD  FF A             R  +  +L ++ C+ +   W++DFP +E N++   +  
Sbjct: 358 DGDIVFFGADKAKIVSEALGALRIKLGHDLKLLTCD-WAPLWVVDFPMFEENDD-GSLSA 415

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
            H+PFT P+   + L+ N   +  +  YD+V NG E+  G IR H  E+    F  +GI 
Sbjct: 416 LHHPFTAPKCTPQELEAN-PSAALSRAYDMVLNGTELGGGSIRIHRKEMQQAVFRILGID 474

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
           +   E +FG L  A + G PPHGG+A G+DR+VML+ GA+++REV  FP +Q+  D++  
Sbjct: 475 EAEQEEKFGFLLDALKFGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQ 534

Query: 575 SPSTVSVEQLRELGLRIVENPK 596
           +P  V  + LR+L +R+ E PK
Sbjct: 535 APGAVDNKALRDLHIRLREQPK 556


>gi|315638545|ref|ZP_07893721.1| aspartate--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481389|gb|EFU72017.1| aspartate--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 583

 Score =  577 bits (1486), Expect = e-162,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 343/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H   DL  +++G  VRL GWV+  R HGG+IF+D+RD  G+ Q+V +P+      EIA
Sbjct: 2   RSHYNTDLNKANIGEEVRLCGWVNSYRDHGGVIFIDLRDRSGLIQLVCDPNDSQKAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+VL   G V  R    INA + TG+IE+   ++ + + +  +P    G+    E
Sbjct: 62  SSVRNEFVLIAHGKVRPRGEGLINAKLKTGEIEVVVSELIVENES-MVPPFAIGDESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRNPRLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM + FDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCANFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++   E  L+ +F        +   F ++ Y +A+  YG+DKPDLR  + + +V
Sbjct: 240 FCEQKDVMAVAETFLKDIFAACGKQ--IRTPFRQMSYKEAMENYGSDKPDLRFDLKLIDV 297

Query: 303 TEHFVHSEFRVFSKILSV--NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I         +   +P      ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFAKSNNEIFTNIAKDPYKNRIKALKVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  + + +  R +++ GD  FF AG       +    R  +
Sbjct: 358 AKED-----GLKGPLCKFFSEEDLKELEKRCELEVGDVVFFGAGVKKVVLDYMGRFRLFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +++ N  EF W++DFP +E N++       H+PFTMP+   E     +L  I + 
Sbjct: 413 AEELKLLDPNALEFLWVVDFPMFEKNDD-GSYSAMHHPFTMPKNIDE----ENLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +E+  + F  + I++E    +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNEIQQKVFKLLNINEEEQREKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+  A ++REV  FP +Q    L+  +PS  S E +RELGL++ E+ K
Sbjct: 528 IGLDRLIMLVSKASSIREVIAFPKTQRAQCLMTEAPSEASKEAMRELGLKLRESVK 583


>gi|261839556|gb|ACX99321.1| aspartyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 577

 Score =  577 bits (1486), Expect = e-162,   Method: Composition-based stats.
 Identities = 220/591 (37%), Positives = 336/591 (56%), Gaps = 17/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKNVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAKKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            ++D++  +E++L+ +F+     + +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 SENDVMGVVEDLLQEIFKAIG--HDISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F  S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFRDSSNAIFSNIAQDPKNKRIKALNVKGADAVFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  + D + GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILEKTDAKTGDIIFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGCHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+  G IR H  E+  + F  + I +E  + +FG L  A + G PPHGG A G
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 527 FDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 577


>gi|296110400|ref|YP_003620781.1| aspartate--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295831931|gb|ADG39812.1| aspartate--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 591

 Score =  577 bits (1486), Expect = e-162,   Method: Composition-based stats.
 Identities = 215/597 (36%), Positives = 326/597 (54%), Gaps = 10/597 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEI 61
             RT   G +  S +G  V LSGWV + R  G +IF+D+RD  GI Q+  N  +++   +
Sbjct: 1   MKRTTYAGLIDDSFLGQTVTLSGWVQKRRDFGDLIFVDLRDREGIVQLTFNATNASALAV 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +R+E+V+ I GLV+SR A  +N  I +G +E+   + +IL+ ++  P  +       
Sbjct: 61  AEDMRNEYVVAITGLVVSRDASQLNEKIRSGSVEIDVTEAKILATSKTPPFYIEDGVNAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E ++ +YR+LDLRR  + KN+  R++I++S    M   +FI   TPIL  S+PEGARD+L
Sbjct: 121 EELKLQYRYLDLRRPEMQKNLRIRSKIMSSAIHFMDNHDFINIETPILAKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  GSFYALPQ+PQ +KQLLM +GFDRYFQIA  FRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRIFPGSFYALPQSPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQP-EFTQMDVET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+  D+I   +   ++ +  +  +    ++    + + +++ R+GTDKPDLR    + +
Sbjct: 240 SFMSADEIRELVNEWVKAMMHDVVDFELDTSKIPTLTWQESMARFGTDKPDLRIAYELKD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T     SEF VF+  +      +  A+P      +R   D++ ++    G  GLA++  
Sbjct: 300 LTTIMASSEFGVFANAVKAGGVVKAIAVPGGAEHYSRKNIDKLAQYIERFGAKGLAWLKV 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        GP+AK         +    D Q GD   F AG      +     R   A
Sbjct: 360 TDD-----GLTGPIAKFFPEEAANKLIAAADAQSGDLLLFGAGRADVVAATLDYLRRQTA 414

Query: 422 QELGIIN-CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           ++L ++N  N + F WI+D+P +E++E+  +   AH+PFTMP            D     
Sbjct: 415 EDLDLVNSENPWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPNEEDLHYLDDGEDPHQAH 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+ SG IR H  ++  +    +G + E     FG L      G PP GG
Sbjct: 475 AQSYDLVLNGYELGSGSIRIHRMDIQEKMLKALGFTPEAAHEAFGFLLEGMNYGFPPMGG 534

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           IA G+DR+ MLL G +N+REV  FP +    + +  +P+ V  +QL +LGL + E  
Sbjct: 535 IALGLDRLAMLLAGQENIREVIAFPKNSRATEPMTEAPTRVGQKQLNDLGLFVPEEK 591


>gi|71275957|ref|ZP_00652239.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella
           fastidiosa Dixon]
 gi|71901399|ref|ZP_00683491.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella
           fastidiosa Ann-1]
 gi|71163190|gb|EAO12910.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella
           fastidiosa Dixon]
 gi|71728832|gb|EAO30971.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella
           fastidiosa Ann-1]
          Length = 589

 Score =  577 bits (1486), Expect = e-162,   Method: Composition-based stats.
 Identities = 217/598 (36%), Positives = 325/598 (54%), Gaps = 19/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN------PDSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI Q+  +       +S  
Sbjct: 2   RTHFCGLINETLIGHTVTLAGWTDVARNLGGVCFIDLRDHEGIVQITVDSRAIDQNNSEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A  +  E VL ++G+V +R A  +N  I TG++E+ A KI+IL+ A    LP     
Sbjct: 62  FKVASGLSYEDVLQVEGVVCARHA--VNDKIKTGKVEVIATKIKILNKAAP--LPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E IR KYR+LDLRR  + +    R +++ ++R  +    F +  TPILT ++PEGAR
Sbjct: 118 NPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E ++R VF+E +    +   F R+ + +A+RR+G+DKPDLR  + 
Sbjct: 237 MEFAFVSERDVQDFVEEMIRRVFKEVAGIE-LDTTFPRMTWKEAMRRFGSDKPDLRINLE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V      S F  F+  ++   G         G   +R   D    +    G  GLAY
Sbjct: 296 LIDVAALVADSTFTPFTDAVAHPNGRVAALRIPSGTVLSRKQIDEYAAYTAKYGATGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                          P+AK  +     ++   +  + GD  FF AG+  K   F +  R 
Sbjct: 356 AKLAPTG----EITSPIAKFFSEDAFASLLSHIGAEKGDIVFFGAGNYNKVSDFMSALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSI 477
              ++  +I  + +   W+ DFP +EW+EE ++    H+PFT P              + 
Sbjct: 412 KAGKDFALITAD-WRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAIDDIDELRAHARTA 470

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD+V NG EI  G IR H  E+    F  +GI+++    +FG L  A   G PPHG
Sbjct: 471 LSRGYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARVKFGFLLDALNYGAPPHG 530

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           GIA GIDRI  L+ G +++R+V  FP +     L+  +PS +S EQL E+ + I + P
Sbjct: 531 GIAFGIDRIAALIAGTESIRDVIPFPKTTGAQCLMTDAPSPISEEQLSEIHV-ITKKP 587


>gi|110004665|emb|CAK99000.1| probable aspartyl-trna synthetase protein [Spiroplasma citri]
          Length = 577

 Score =  576 bits (1485), Expect = e-162,   Method: Composition-based stats.
 Identities = 230/590 (38%), Positives = 349/590 (59%), Gaps = 13/590 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RTH CG+L + +V S V LSGWV + R  GGIIFLD+RD  GI Q+V  PD   + + 
Sbjct: 1   MKRTHPCGELTLKNVKSKVVLSGWVAKNRRLGGIIFLDLRDRTGIIQIVVQPDHPQYAMI 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++R+E+V+ ++G+V+ R  +  N  + TG+IE++A++I ILS A+  PL +    +  E
Sbjct: 61  NTIRNEFVISVEGVVIER--KNKNLELPTGEIEIAAEQITILSKAQTPPLIINDITDALE 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + + I+ R +++ ++R       FI+  TPIL  S+PEGARDFLV
Sbjct: 119 DVRMKYRYLDLRRPIMQQKIMLRNQLVQTIRQFCQVHQFIDIETPILNKSTPEGARDFLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N   FYALPQ+PQ +KQLLM +GFD+YFQIA CFRDED RSDR P EF QLD+EMS
Sbjct: 179 PSRLNPHHFYALPQSPQLFKQLLMLAGFDKYFQIAKCFRDEDLRSDRQP-EFTQLDLEMS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV +DDI++ +E +   + ++          FL + YD+AI +YGTDKPD R  + + + 
Sbjct: 238 FVTRDDIMDFVETLFHTIMQDVMKVKI-KTPFLWMDYDEAIEKYGTDKPDTRYDLQLFDA 296

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            + F  +EF +F+  L      +   IP      ++   + +   A+     GLA++   
Sbjct: 297 KDIFAKTEFSIFATALKKELSLKGIFIPQL---VSKKQVEELTRIAQQNKAKGLAWVKQE 353

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +        GP+AK L+      +    + Q G + FF++      C      R  +A+
Sbjct: 354 KNN-----WEGPLAKALSDNEKTKLLQVCNKQAG-TFFFVSDQKAITCQALGAVRVALAK 407

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              +I  N + F WI+++P YEW++E  + + AH+PFT P          ++ + +A  Y
Sbjct: 408 MFDLIPLNEYHFLWIVNWPLYEWSDENNRYEAAHHPFTAPTSEFIDNFEQNMATARADAY 467

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+EI  G IR H +EV  + F ++ +S + + N+FG    AF  G+PPHGGIA G
Sbjct: 468 DLVLNGYEIGGGSIRIHQNEVQTRMFKSLQLSNQEIANKFGWFLNAFNYGVPPHGGIAFG 527

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +DR+ M+L  ++++R+V  FP +    D +  SPS V  +QL ELG+++ 
Sbjct: 528 LDRLAMILTNSESIRDVIAFPKNATGIDPMTASPSPVDGKQLDELGIKLK 577


>gi|170730261|ref|YP_001775694.1| aspartyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|238687919|sp|B0U2I5|SYD_XYLFM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167965054|gb|ACA12064.1| aspartyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 589

 Score =  576 bits (1485), Expect = e-162,   Method: Composition-based stats.
 Identities = 215/592 (36%), Positives = 322/592 (54%), Gaps = 18/592 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN------PDSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI Q+  +       +S  
Sbjct: 2   RTHFCGLINETLIGHTVTLAGWTDVARNLGGVCFIDLRDHEGIVQITVDSRAIDQNNSEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F++A  +  E VL ++G+V +R A  +N  I TG++E+ A KI+IL+ A    LP     
Sbjct: 62  FKVASGLSYEDVLQVEGVVCARHA--VNDKIKTGKVEVIATKIKILNKAAP--LPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E IR KYR+LDLRR  + +    R +++ ++R  +    F +  TPILT ++PEGAR
Sbjct: 118 NPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E ++R VF+E +    +   F R+ + +A+RR+G+DKPDLR  + 
Sbjct: 237 MEFAFVSERDVQDFVEEMIRRVFKEVAGIE-LDTTFPRMTWKEAMRRFGSDKPDLRINLE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V      S F  F+  ++   G         G   +R   D    +    G  GLAY
Sbjct: 296 LIDVAALVADSTFTPFTDAVAHPNGRVAALRIPSGTVLSRKQIDEYAAYTAKYGATGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                          P+AK  +     ++   +  + GD  FF AG+  K   F +  R 
Sbjct: 356 AKLAPTG----EITSPIAKFFSEDAFASLLSHIGAEKGDIVFFGAGNYNKVSDFMSALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSI 477
              ++  +I  + +   W+ DFP +EW+EE ++    H+PFT P              + 
Sbjct: 412 KAGKDFALITAD-WRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAIDDIDELRAHARTA 470

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD+V NG EI  G IR H  E+    F  +GI+++    +FG L  A   G PPHG
Sbjct: 471 LSRGYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARAKFGFLLDALNYGAPPHG 530

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           GIA GIDRI  L+ G +++R+V  FP +     L+  +PS +S EQL E+ +
Sbjct: 531 GIAFGIDRIAALIAGTESIRDVIPFPKTTGAQCLMTDAPSPISEEQLSEIHV 582


>gi|309803214|ref|ZP_07697311.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|309810238|ref|ZP_07704083.1| aspartate--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|312871698|ref|ZP_07731786.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872949|ref|ZP_07733009.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312875589|ref|ZP_07735590.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|325912183|ref|ZP_08174581.1| aspartate--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325912686|ref|ZP_08175069.1| aspartate--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|308164722|gb|EFO66972.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308169510|gb|EFO71558.1| aspartate--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|311088843|gb|EFQ47286.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311091471|gb|EFQ49855.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092640|gb|EFQ50996.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|325476133|gb|EGC79301.1| aspartate--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325478107|gb|EGC81236.1| aspartate--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 612

 Score =  576 bits (1485), Expect = e-162,   Method: Composition-based stats.
 Identities = 215/592 (36%), Positives = 339/592 (57%), Gaps = 11/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG++        V + GWV RVR  G +IF+D+RD  GI QVV N DS  A  ++A
Sbjct: 4   RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +E+V+ + G V+ RS   +N  I TG++E++A  I +L+ ++  P  +  +    E
Sbjct: 64  QKLGNEYVVEVQGKVVRRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR +L  +I+ R++I++++      E F+   TP L  S+PEGARD+LV
Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S
Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  +    E +L+ V ++    + V+    RI +D+A+ +YG+DKPD+R  + +H++
Sbjct: 241 FLDEKGVQTYTEGLLKKVMKDVMGIDIVTPI-KRITWDEAMNKYGSDKPDIRYDMHLHDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++ F  SEF+VF+  LS     +  A+       +R   +   E+ +     G+A++ + 
Sbjct: 300 SDIFKDSEFKVFADTLSNGGVIKGIAVKGGAEAYSRKKIEEKQEYIKRYHAKGIAWVKYE 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                N    GP+A+ L       +    ++  G+    IA             R   A+
Sbjct: 360 -----NGEFTGPIARFLTENQKRDLISEFELTGGELITIIADIWKVVTDSLDYLRRTFAK 414

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E GII  + F+F W++D+P +E++E +++   AH+PFTMP      L   +     A  Y
Sbjct: 415 ETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHARSY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  E+  + F  +G +KE    +FG L  A   G PPH G+A G
Sbjct: 475 DIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFLLEALDMGFPPHAGLAIG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR  MLL    N+R+V  FP + +  + +M SP+ V+ +QL +LG+ ++  
Sbjct: 535 LDRFAMLLAEKDNIRDVIAFPKNASASEPMMHSPAPVADKQLADLGINVMSE 586


>gi|119716625|ref|YP_923590.1| aspartyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|166225368|sp|A1SJB8|SYD_NOCSJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119537286|gb|ABL81903.1| aspartyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 590

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 227/600 (37%), Positives = 328/600 (54%), Gaps = 29/600 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT   G L   +VG  V L+GWV   R HGG+ F+D+R+  G+ QVV   +    ++A  
Sbjct: 3   RTQDAGALRAENVGQTVTLAGWVANRRDHGGVAFIDLREASGVVQVVIRDE----QVAHH 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ L + G V  R     N N+ TG++E+ A ++E+LS A  LP P+    +  E  
Sbjct: 59  LRAEYCLAVTGEVTRRKEGNENPNLATGEVEVVANEVEVLSAAAPLPFPISDHVDVGEEA 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R K+R+LDLRR   +  +  R+++  + R  +   +F+E  TP LT S+PEGARDFLVP+
Sbjct: 119 RLKHRYLDLRRSGPNNALRLRSKVNKAARDVLDRHDFVEIETPTLTRSTPEGARDFLVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+EMSFV
Sbjct: 179 RLQPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDIEMSFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           EQDD+L   E VL  +++     + V     R+ Y +++ RYGTDKPDLR    + + T 
Sbjct: 238 EQDDVLAVAEEVLVALWKLVG--HDVPVPLPRMTYAESMERYGTDKPDLRMGQELVDCTA 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+  + D
Sbjct: 296 YFADTPFRVFQA------DYVGAVVMPGGASQPRKQLDAWQEWAKQRGAKGLAYVLVQDD 349

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
                   GPV+K++    +  +      + GD  FF AG P    +    AR  I +  
Sbjct: 350 G----ELTGPVSKNITDGESAGLAEHTGAKPGDCIFFAAGAPKPSRALLGAARLEIGRRC 405

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGMESLKGNDL 474
            +I+ + + F W++D P +E   +                 H+ FT PQ         D 
Sbjct: 406 DLIDEDAWSFLWVVDAPLFEPTADATASGDVALGYSAWTAVHHAFTSPQ--DVDGFDADP 463

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A+ YD+VCNG EI  G IR H  +V  + F+ +GI +   + +FG L  AF+ G P
Sbjct: 464 GSALAWAYDIVCNGNEIGGGSIRIHREDVQKRVFAIMGIDEAEAQEKFGFLLEAFKYGAP 523

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DRIV LL G +++R+V  FP S    D L  +P+ ++ EQ +E G+     
Sbjct: 524 PHGGIAFGWDRIVALLAGTESIRDVIAFPKSGGGFDPLTAAPAPITPEQRKEAGVDARPQ 583


>gi|312874150|ref|ZP_07734184.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311090220|gb|EFQ48630.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
          Length = 612

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 216/592 (36%), Positives = 339/592 (57%), Gaps = 11/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG++        V + GWV RVR  G +IF+D+RD  GI QVV N DS  A  ++A
Sbjct: 4   RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +E+V+ + G V+ RS   +N  I TG++E++A  I +L+ ++  P  +  +    E
Sbjct: 64  QKLGNEYVVEVQGKVVRRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR +L  +I+ R++I++++      E F+   TP L  S+PEGARD+LV
Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S
Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  +    E +L+ V ++    + V+    RI +D+A+ +YG+DKPD+R  + +H++
Sbjct: 241 FLDEKGVQTYTEGLLKKVMKDVMGIDIVTPI-KRITWDEAMNKYGSDKPDIRYDMHLHDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E F  SEF+VF+  LS     +  A+       +R   +   E+ +     G+A++ + 
Sbjct: 300 SEIFKDSEFKVFADTLSNGGVIKGIAVKDGAEAYSRKKIEEKQEYIKRYHAKGIAWVKYE 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                N    GP+A+ L       +    ++  G+    IA             R   A+
Sbjct: 360 -----NGEFTGPIARFLTENQKRDLISEFELTGGELITIIADIWKVVTDSLDYLRRTFAK 414

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E GII  + F+F W++D+P +E++E +++   AH+PFTMP      L   +     A  Y
Sbjct: 415 ETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHARSY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  E+  + F  +G +KE    +FG L  A   G PPH G+A G
Sbjct: 475 DIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFLLEALDMGFPPHAGLAIG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR  MLL    N+R+V  FP + +  + +M SP+ V+ +QL +LG+ ++  
Sbjct: 535 LDRFAMLLAEKDNIRDVIAFPKNASASEPMMHSPAPVADKQLDDLGINVMSE 586


>gi|229817226|ref|ZP_04447508.1| hypothetical protein BIFANG_02486 [Bifidobacterium angulatum DSM
           20098]
 gi|229785015|gb|EEP21129.1| hypothetical protein BIFANG_02486 [Bifidobacterium angulatum DSM
           20098]
          Length = 599

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 225/610 (36%), Positives = 335/610 (54%), Gaps = 33/610 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V LSGWV R R HGG+ F+D+RD  G+ QVV        E A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLSGWVDRRRDHGGVAFIDLRDSSGLVQVVI----YDEEQAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFG 116
            +RSE+V+ + G V  R     N ++ TG+IE+ A+ I++L+ ++ LP            
Sbjct: 62  PLRSEFVIQVTGEVRLRPEGNENEHLATGKIEVVAESIDVLAKSDALPFQVSTALENESE 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR  +  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEEVRLKYRYLDLRRPGMQSNLKLRSDMAKAARHALEDLDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQFARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM++V+Q+D++   E V+  +++  + G  V     RI + +A+ +YG+DKPDLR  
Sbjct: 241 LDMEMAYVDQEDVMAMAEKVIAAIWK--AAGYEVQLPLPRITWQEAMDKYGSDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +T++F ++ FRVF         Y    +   G    R   D   EWA+ +G  GL
Sbjct: 299 NPIIELTDYFKNTPFRVFQAP------YVGAVLFKGGASTPRRQFDAWQEWAKQRGAKGL 352

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +  D        GPVAK+L+      ++  +  +DGD+ FF AG           A
Sbjct: 353 AYVQFTADG----ELKGPVAKNLSDEERAGLKEAVGAEDGDAVFFAAGARESSQLLLGAA 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A   G+++   F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 409 RVELASRAGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H  ++  +  + +GISKE  E++FG L  
Sbjct: 469 DKFDQDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQDRVLNVLGISKEEAEDKFGFLLE 528

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH GIA G DR V +L GA ++R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 529 AFKYGAPPHAGIALGWDRTVSILAGAPSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAET 588

Query: 588 GLRIVENPKK 597
           G+    +  +
Sbjct: 589 GVDYDPDEDE 598


>gi|329920161|ref|ZP_08276992.1| aspartate--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|328936615|gb|EGG33059.1| aspartate--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 612

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 216/592 (36%), Positives = 339/592 (57%), Gaps = 11/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG++        V + GWV RVR  G +IF+D+RD  GI QVV N DS  A  ++A
Sbjct: 4   RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +E+V+ + G V+ RS   +N  I TG++E++A  I +L+ ++  P  +  +    E
Sbjct: 64  QKLGNEYVVEVQGKVVRRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR +L  +I+ R++I++++      E F+   TP L  S+PEGARD+LV
Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S
Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  +    E +L+ V ++    + V+    RI +D+A+ +YG+DKPD+R  + +H++
Sbjct: 241 FLDEKGVQTYTEGLLKKVMKDVMGIDIVTPI-KRITWDEAMNKYGSDKPDIRYDMHLHDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E F  SEF+VF+  LS     +  A+       +R   +   E+ +     G+A++ + 
Sbjct: 300 SEIFKDSEFKVFADTLSNGGVIKGIAVKDGAEAYSRKKIEEKQEYIKRYHAKGIAWVKYE 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                N    GP+A+ L       +    ++  G+    IA             R   A+
Sbjct: 360 -----NGEFTGPIARFLTENQKRDLISEFELTGGELITIIADIWKVVTDSLDYLRRTFAK 414

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E GII  + F+F W++D+P +E++E +++   AH+PFTMP      L   +     A  Y
Sbjct: 415 ETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHARSY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  E+  + F  +G +KE    +FG L  A   G PPH G+A G
Sbjct: 475 DIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFLLEALDMGFPPHAGLAIG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR  MLL    N+R+V  FP + +  + +M SP+ V+ +QL +LG+ ++  
Sbjct: 535 LDRFAMLLAEKDNIRDVIAFPKNASASEPMMHSPAPVADKQLADLGISVMSE 586


>gi|315653586|ref|ZP_07906506.1| aspartate--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|315488948|gb|EFU78590.1| aspartate--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 612

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 216/592 (36%), Positives = 339/592 (57%), Gaps = 11/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG++        V + GWV RVR  G +IF+D+RD  GI QVV N DS  A  ++A
Sbjct: 4   RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +E+V+ + G V+ RS   +N  I TG++E++A  I +L+ ++  P  +  +    E
Sbjct: 64  QKLGNEYVVEVQGKVVRRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR +L  +I+ R++I++++      E F+   TP L  S+PEGARD+LV
Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S
Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  +    E +L+ V ++    + V+    RI +D+A+ +YG+DKPD+R  + +H++
Sbjct: 241 FLDEKGVQTYTEGLLKKVMKDVMGIDIVTPI-KRITWDEAMNKYGSDKPDIRYDMHLHDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E F  SEF+VF+  LS     +  A+       +R   +   E+ +     G+A++ + 
Sbjct: 300 SEIFKDSEFKVFADTLSNGGVIKGIAVKDGAEAYSRKKIEEKQEYIKRYHAKGIAWVKYE 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                N    GP+A+ L       +    ++  G+    IA             R   A+
Sbjct: 360 -----NGEFTGPIARFLTENQKRDLISEFELTGGELITIIADIWKVVTDSLDYLRRTFAK 414

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E GII  + F+F W++D+P +E++E +++   AH+PFTMP      L   +     A  Y
Sbjct: 415 ETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHARSY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  E+  + F  +G +KE    +FG L  A   G PPH G+A G
Sbjct: 475 DIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFLLEALDMGFPPHAGLAIG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR  MLL    N+R+V  FP + +  + +M SP+ V+ +QL +LG+ ++  
Sbjct: 535 LDRFAMLLAEKDNIRDVIAFPKNASASEPMMHSPAPVADKQLADLGINVMSE 586


>gi|227879061|ref|ZP_03996951.1| aspartyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256850293|ref|ZP_05555722.1| aspartyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262046028|ref|ZP_06018992.1| aspartyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293381307|ref|ZP_06627310.1| aspartyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|227861356|gb|EEJ68985.1| aspartyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256712930|gb|EEU27922.1| aspartyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260573987|gb|EEX30543.1| aspartyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290922123|gb|EFD99122.1| aspartyl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 617

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 223/608 (36%), Positives = 348/608 (57%), Gaps = 13/608 (2%)

Query: 1   MHR--YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-- 56
           M +   RT  CG++    +G  V L GWV RVR  G ++F+D+RD  G+ Q+V N DS  
Sbjct: 1   MEKIEKRTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGK 60

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +IA S+ +E+V+ + G V+ RS   +N ++ TGQ+E+ A +I IL+ A+  P  +  
Sbjct: 61  KLMDIADSLGNEYVVQVKGKVVKRSE--VNPDMKTGQVEVDATEIIILNKAKNPPFEIKD 118

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             E  E  R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEG
Sbjct: 119 GIEVSEQTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEG 178

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q
Sbjct: 179 ARDYLVPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQ 237

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +DMEMSF +++ I +  E +L+ + ++    + +     RI + D++ +YG DKPD R  
Sbjct: 238 IDMEMSFADEETIQSYTEGLLKKIMKDVKGID-LKTPIKRITWTDSMNKYGCDKPDTRYG 296

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           +++H+++  F  S+F+VFS  ++     +  A+       +R   D+  ++ +     GL
Sbjct: 297 MLIHDLSPIFKDSDFKVFSGAIADGGFVKGIAVKNGAKEYSRKKIDKKADFIKRFHAKGL 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A++ +   E G  +  GPVA+ L   N EA++   D++ G+   F+A      C      
Sbjct: 357 AWVKF---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFVADKWKVCCDSLDHL 411

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R   A+E GII    ++F W++D+P +E++E   +   AH+PFTMP      L   +   
Sbjct: 412 RREFAKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHK 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG E+  G IR H   +    F  +G +K+    +FG L  A   G PPH
Sbjct: 472 AHARSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+A G+DR  M+L    N+R+VS FP + +  + +M +P+ V+ +QL +LG+ + E  +
Sbjct: 532 AGLAIGLDRFAMMLADKDNIRDVSAFPKNASASEPMMHAPAPVADQQLADLGIEVEEKYQ 591

Query: 597 KILKISVT 604
             +K +  
Sbjct: 592 DSVKATEE 599


>gi|28198847|ref|NP_779161.1| aspartyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182681544|ref|YP_001829704.1| aspartyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130090|sp|Q87CW0|SYD_XYLFT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238691039|sp|B2I4Y5|SYD_XYLF2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|28056938|gb|AAO28810.1| aspartyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182631654|gb|ACB92430.1| aspartyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307579971|gb|ADN63940.1| aspartyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 589

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 215/592 (36%), Positives = 321/592 (54%), Gaps = 18/592 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN------PDSAC 58
           RTH CG +  + +G  V L+GW    R  GG+ F+D+RDH GI Q+  +       +S  
Sbjct: 2   RTHFCGLINETLIGHTVTLAGWTDVARNLGGVCFIDLRDHEGIVQITVDSRAIDQNNSEL 61

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F +A  +  E VL ++G+V +R A  +N  I TG++E+ A KI+IL+ A    LP     
Sbjct: 62  FRVASGLSYEDVLQVEGVVHARHA--VNDKIKTGKVEVIATKIKILNKAAP--LPFHAHE 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E IR KYR+LDLRR  + +    R +++ ++R  +    F +  TPILT ++PEGAR
Sbjct: 118 NPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILTKATPEGAR 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ G FYALPQ+PQ +KQ+LM +GFDRY+QIA CFRDE  R+DR   EF QLD
Sbjct: 178 DFLVPARMHPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQL-EFTQLD 236

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME +FV + D+ + +E ++R VF+E +    +   F R+ + +A+RR+G+DKPD+R  + 
Sbjct: 237 MEFAFVSERDVQDFVEEMIRRVFKEVAGIE-LDTTFPRMTWKEAMRRFGSDKPDMRINLE 295

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V      S F  F+  ++   G        +G   +R   D    +    G  GLAY
Sbjct: 296 LIDVAALVADSTFTPFTNAVAHPNGRVAALRIPRGAVLSRKQIDEYAAYTAKYGATGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                          P+AK  +     A+   +  + GD  FF AG+  K   F    R 
Sbjct: 356 AKLAPTG----EITSPIAKFFSEDAFAALLSHIGAEKGDIVFFGAGNYNKVSDFMGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSI 477
              ++  +I  + +   W+ DFP +EW+EE ++    H+PFT P              + 
Sbjct: 412 KAGKDFALITAD-WRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAINDIDELRTHARTA 470

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD+V NG EI  G IR H  E+    F  +GI+++    +FG L  A   G PPHG
Sbjct: 471 LSRGYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARAKFGFLLDALNYGAPPHG 530

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           GIA GIDRI  L+ G +++R+V  FP +     L+  +PS +S EQL E+ +
Sbjct: 531 GIAFGIDRIAALIAGTESIRDVIPFPKTTGAQCLMTDAPSPISEEQLSEIHV 582


>gi|329942396|ref|ZP_08291206.1| aspartyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287037|ref|YP_004421938.1| aspartyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313847634|emb|CBY16622.1| putative aspartyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325507318|gb|ADZ18956.1| aspartyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328815306|gb|EGF85294.1| aspartyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328914269|gb|AEB55102.1| aspartyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 584

 Score =  575 bits (1483), Expect = e-162,   Method: Composition-based stats.
 Identities = 237/594 (39%), Positives = 338/594 (56%), Gaps = 14/594 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
           +YRTH C +L +S+VG  VR+SGWVHR R HGG++F+D+RD +GITQ+V   D      +
Sbjct: 2   KYRTHRCNELSLSNVGERVRVSGWVHRYRNHGGVVFIDLRDRFGITQIVCREDEKPELHQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119
           +  SVRSEWVL I+G V  R     NAN+ TG+IE+  +K+EILS A+            
Sbjct: 62  LVDSVRSEWVLSIEGTVCRRLEGMENANLATGEIEVDIEKVEILSKAKNLPFSISDDHIH 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LD+RR  +   +V R +++ + R  M  + F E  TPIL  S+PEGARD
Sbjct: 122 VNEELRLEYRYLDMRRGQILDRLVCRHKVMMACRQYMDKQGFTEVVTPILGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  GSFYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+D+
Sbjct: 182 YLVPSRIYPGSFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFAQIDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF   +D+   +E ++  +F     G  +     R+ Y +A   YGTDKPDLR  + +
Sbjct: 241 EMSFATPNDLFPIIEQLVVEMFA--VQGIKIDLPLPRMTYQEAKDLYGTDKPDLRFGLQL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           H+  EH     F +F   L+     + + +P  G   +R   D   E+ +  G  GL +I
Sbjct: 299 HDCREHAKEFSFSIFLDQLAQGGTIKGFCVP-GGADISRKQLDVYTEFVKRYGAMGLVWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             + +          VAK  +    +A+      +D D    IA             R  
Sbjct: 358 KKQEN-----GIASNVAKFASEAVFQAMFADFGAEDNDILLLIAAPEDVANQSLDHLRRL 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+E  + N + +   WI DFP +   +E+ KI   H+PFT P      L   D LS+++
Sbjct: 413 IAKERNLYNESQYNCVWITDFPLF--AKEDGKICSEHHPFTSPLDEDIPLLDKDPLSVRS 470

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+EIASG  R H +++  + FS + +S E ++ +FG    A   G PPH GI
Sbjct: 471 SSYDLVLNGYEIASGSQRIHNADLQNKIFSILELSPESIKEKFGFFIDALSFGTPPHLGI 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DRI+M+L GA+ +REV  FP +Q   DL+M +PS +   QL+EL +++  
Sbjct: 531 ALGLDRIMMVLTGAEGIREVIAFPKTQKAADLMMDAPSKIMTSQLKELNIKVTS 584


>gi|163840731|ref|YP_001625136.1| aspartyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162954207|gb|ABY23722.1| aspartyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 617

 Score =  575 bits (1483), Expect = e-162,   Method: Composition-based stats.
 Identities = 216/600 (36%), Positives = 321/600 (53%), Gaps = 27/600 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L    +G  V L+GWV R R HGG+ FLD+RD  G+ Q+V   +    +   S
Sbjct: 22  RTHDLGSLNAELIGQTVTLTGWVARRRDHGGVAFLDLRDASGVAQIVVRDE----KDFGS 77

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+VL + G V  R     N  + TG+IE+ A+ + +L+ +  LP  +    +  E  
Sbjct: 78  LRNEFVLQMTGSVERRPEGNENPALATGEIEVVAETVVVLNESAPLPFQIDEHGDVGEEA 137

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R+LDLRR  +  N+  R+ +    R  +  E F+E  TP +T S+P GARDF+VP+
Sbjct: 138 RLRHRYLDLRRAPMAHNLKLRSEVNRVARNLLHDEGFVEIETPTMTLSTPGGARDFVVPA 197

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G+ Y L Q+PQ +KQLL   GF++Y+QIA C+RDED R+DR P EF QLD+E SFV
Sbjct: 198 RLAPGNGYGLAQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQP-EFTQLDIEASFV 256

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           E++DIL   E ++  +++       +     R+ Y +A+ R+G+DKPDLR    + ++TE
Sbjct: 257 EEEDILALGERIVSALWKLI--DFEIPLPIQRMPYWEAMARFGSDKPDLRFGQELTDLTE 314

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         Y    +   G    R   D   EWA+ +G  GLAY+  +  
Sbjct: 315 YFKDTTFRVFQAA------YVGAVVMPCGASQPRRTLDGWQEWAKQRGAKGLAYVLIQ-- 366

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G +   GPVAK+L+      +  ++  + GD  FF AG+     S     R  I    
Sbjct: 367 EDGELT--GPVAKNLSEAEKAGLAEKVGAKPGDCVFFGAGERDDAWSILGATRVEIGHRT 424

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEK----------KIDFAHNPFTMPQGGMESLKGNDL 474
           G+I+   F F WI+D P +E     K               H+ FT P+         D 
Sbjct: 425 GLIDPKAFAFVWIVDAPMFESAAAAKASGDTTVGAGDWTALHHAFTSPKAEFMENFDQDP 484

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A+ YD+VCNG EI  G IR H  ++  + F+ +G+ +   +  FG L   F+ G P
Sbjct: 485 AAALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFALMGLDETQQQETFGFLLEGFKYGAP 544

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G DR V LL G +++R+V  FP S    D L G+P+ ++ +Q +E G+  V  
Sbjct: 545 PHGGIALGWDRTVALLAGVESIRDVIAFPKSGGGFDPLTGAPAPITPQQRKEAGIDAVAK 604


>gi|108799275|ref|YP_639472.1| aspartyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|108769694|gb|ABG08416.1| aspartyl-tRNA synthetase [Mycobacterium sp. MCS]
          Length = 572

 Score =  575 bits (1483), Expect = e-162,   Method: Composition-based stats.
 Identities = 229/586 (39%), Positives = 325/586 (55%), Gaps = 28/586 (4%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            L+GWV R R HGG+IF+D+RD  G++QVV   + A  E A  +R+E+ + ++G+V  R 
Sbjct: 2   TLAGWVARRRDHGGVIFIDLRDASGVSQVVF-REGAVLEAAHRLRAEFCVAVEGVVEVRP 60

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
               N  I TG IE++A  + +L  +    LP   + E  E  R KYR+LDLRR+   K 
Sbjct: 61  EGNENPEIPTGGIEVNATSLTVLGESAP--LPFQLDDEAGEEARLKYRYLDLRREGPGKA 118

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +  R+++  + R  +   +F+E  TP +T S+PEGARDFLVP+R+  GSFYALPQ+PQ +
Sbjct: 119 LRLRSKVNAAAREVLARHDFVEIETPTMTRSTPEGARDFLVPARLQPGSFYALPQSPQLF 178

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQLLM +G +RY+QIA C+RDED R+DR P EF QLDMEMSFV+ DD++   E +L+ ++
Sbjct: 179 KQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDMEMSFVDADDVIAVSEEILKALW 237

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
                 + +     RI Y +A+ R+GTDKPDLR  + +    E F  + FRVF       
Sbjct: 238 ALIG--HDLPTPLPRITYAEAMHRFGTDKPDLRFGLELVECKEFFADTTFRVFQAP---- 291

Query: 322 PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNI 381
             Y    +   G    R   D   EWA+ +G  GLAY+   + + G +   GPVAK+L  
Sbjct: 292 --YVGAVVMPGGASQPRRTLDGWQEWAKQRGAKGLAYVL--VGDDGTLG--GPVAKNLTD 345

Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFP 441
              + +   +    GD  FF AG P    +    AR  IA+ L +I+ + + F W++D+P
Sbjct: 346 AERDGLAAHVGANPGDCIFFAAGPPKSSRALLGAARIEIAKRLDMIDPDAWAFTWVVDWP 405

Query: 442 FYEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
            +E  E+                 H+ FT PQ   E+    D     A  YD+VCNG EI
Sbjct: 406 LFEMAEDATAAGDVAVGSGAWTAVHHAFTAPQPQSEATFDTDPAGALADAYDIVCNGNEI 465

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G IR H  +V  + F+ +GI  +  + +FG L  AF  G PPHGGIA G DRI  LL 
Sbjct: 466 GGGSIRIHRRDVQERVFAMMGIEHDEAQEKFGFLLDAFTFGAPPHGGIAFGWDRITALLA 525

Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
              ++REV  FP S    D L G+P+ ++ +Q RE G+     PKK
Sbjct: 526 RMDSIREVIAFPKSGGGADPLTGAPAPITPQQRRESGID--AKPKK 569


>gi|328956043|ref|YP_004373376.1| aspartyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456367|gb|AEB07561.1| aspartyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 596

 Score =  575 bits (1482), Expect = e-162,   Method: Composition-based stats.
 Identities = 218/594 (36%), Positives = 333/594 (56%), Gaps = 11/594 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-- 58
           MH   + + G+L  +D+G  V L+GWV R R HGG+IF D+RD  G+TQ   +P+ +   
Sbjct: 10  MHSMHSRTSGELRAADIGQEVTLTGWVWRRRDHGGLIFCDLRDRTGLTQCTFDPEHSGGE 69

Query: 59  -FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F  A+++R EW + + G+V SR  + +N  + TG+IE+    I + + A+  P P+   
Sbjct: 70  AFRTAETMRPEWPILVRGIVKSRGEDMVNPKLATGEIEVLVDHITVFNRAKTPPFPIEDG 129

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +  E  R +YR+LD+RR  +   +  R     ++R  +    F E  TP+L  S+PEGA
Sbjct: 130 IDTAEDTRLRYRYLDMRRPEVAAKLRLRDEFAFAVRKALHDRAFTEIETPVLGKSTPEGA 189

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RDF+VPSR   GSFYALPQ+PQ  KQLLM  G +RY+Q+A C+RDED R+DR P EF Q+
Sbjct: 190 RDFIVPSRTQPGSFYALPQSPQLLKQLLMIGGVERYYQVAKCYRDEDLRADRQP-EFTQV 248

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV +DD++  ME+VL   F +            RI Y +A+  +G+DKPD R  +
Sbjct: 249 DVEMSFVTEDDVICEMEDVLLEAFTQVG--VGFPAPLRRIPYWEAMDTFGSDKPDTRYGM 306

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + ++++ F HS+F+VF+                  G   RA  D++++ A   G  GLA
Sbjct: 307 HLIDLSDTFEHSDFKVFAHAAKAEGQVVKALNARGAGAWPRAQIDKLSDVATRLGAKGLA 366

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +I +R D     +   P+AK  +      +R R D++ GD    +AG+ L         R
Sbjct: 367 WIAFRPDG----SVSSPIAKFFSESEMADLRSRCDVESGDLVMLVAGERLCADEVLGGMR 422

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            H+A  LG +     +F W++DFP ++++  E++    H+PFT P+         D L++
Sbjct: 423 THMADALG-VPRQGHDFLWVVDFPLFKYDAAEQRFASEHHPFTQPRDEDREKIATDPLAV 481

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YDLV +GFE   GGIR H S+V L+    +G  +     +FG L  A   G PP G
Sbjct: 482 GSCTYDLVMDGFEAGGGGIRIHESDVQLKVLERLGFDEASAREQFGFLLDALDYGAPPMG 541

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G A G+DRI MLL  + ++R+V  FP + +  DL++ +PS VS  QL ++ +R+
Sbjct: 542 GCAFGLDRICMLLTDSASIRDVIAFPKTSSGSDLMLRAPSPVSSRQLEDVSIRL 595


>gi|259500578|ref|ZP_05743480.1| aspartate-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302191269|ref|ZP_07267523.1| aspartyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309806585|ref|ZP_07700582.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|259167962|gb|EEW52457.1| aspartate-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|308167005|gb|EFO69187.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 612

 Score =  575 bits (1482), Expect = e-162,   Method: Composition-based stats.
 Identities = 214/592 (36%), Positives = 338/592 (57%), Gaps = 11/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG++        V + GWV RVR  G +IF+D+RD  GI QVV N DS  A  ++A
Sbjct: 4   RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +E+V+ + G V+ RS   +N  I TG++E++A  I +L+ ++  P  +  +    E
Sbjct: 64  QKLGNEYVVEVQGKVVKRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR +L  +I+ R++I++++      E F+   TP L  S+PEGARD+LV
Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S
Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  +    E +L+ V ++    + V+    RI +D+A+ +YG+DKPD+R  + +H++
Sbjct: 241 FLDEKGVQTYTEGLLKKVMKDVMGIDIVTPI-KRITWDEAMNKYGSDKPDIRYDMHLHDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++ F  SEF+VF+  LS     +  A+       +R   +   E+ +     G+A++ + 
Sbjct: 300 SDIFKDSEFKVFADTLSNGGVIKGIAVKGGAEAYSRKKIEEKQEYIKRYHAKGIAWVKYE 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                N    GP+ + L       +    ++  G+    IA             R   A+
Sbjct: 360 -----NGEFTGPIVRFLTENQKRDLISEFELTGGELITIIADIWKVVTDSLDYLRRTFAK 414

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E GII  + F+F W++D+P +E++E +++   AH+PFTMP      L   +     A  Y
Sbjct: 415 ETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHARSY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  E+  + F  +G +KE    +FG L  A   G PPH G+A G
Sbjct: 475 DIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFLLEALDMGFPPHAGLAIG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR  MLL    N+R+V  FP + +  + +M SP+ V+ +QL +LG+ ++  
Sbjct: 535 LDRFAMLLAEKDNIRDVIAFPKNASASEPMMHSPAPVADKQLADLGINVMSE 586


>gi|29839845|ref|NP_828951.1| aspartyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|31340507|sp|Q46175|SYD_CHLCV RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|29834192|gb|AAP04829.1| aspartyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 584

 Score =  575 bits (1482), Expect = e-162,   Method: Composition-based stats.
 Identities = 234/594 (39%), Positives = 337/594 (56%), Gaps = 14/594 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
           +YRTH C +L +S+VG  VR+SGWVHR R HGG++F+D+RD +GITQ+V   D      +
Sbjct: 2   KYRTHRCNELSLSNVGERVRVSGWVHRYRNHGGVVFIDLRDRFGITQIVCREDEKPELHQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119
           +  SVRSEWVL ++G V  R     NAN+ TG IE+  +K++ILS A+            
Sbjct: 62  LVDSVRSEWVLSVEGTVCRRLEGMENANLATGDIEVEIEKVDILSKAKNLPFSISDDHIH 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LD+RR  +   ++ R +++ + R  M  + F E  TP+L  S+PEGARD
Sbjct: 122 VNEELRLEYRYLDMRRGQILDRLIYRHKVMLACRQYMDKQGFTEVVTPVLGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  GSFYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+D+
Sbjct: 182 YLVPSRIYPGSFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFAQIDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF   DD+   +E ++  +F     G  +     R+ Y +A   YGTDKPDLR  + +
Sbjct: 241 EMSFATPDDLFPIIEQLVVEMFS--VQGIKIDLPLPRMTYQEAKDLYGTDKPDLRFGLQL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +  EH     F +F   L+     + + +P  G   +R   D   E+ +  G  GL +I
Sbjct: 299 RDCREHAKQFSFSIFLDQLAQGGTIKGFCVP-GGADMSRKQLDVYTEFVKRYGAMGLVWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             + +          VAK  +    +A+      +D D    IA             R  
Sbjct: 358 KKQEN-----GLASNVAKFASEEVFDAMFADFSAKDNDILLLIAAPESIANQSLDHLRRL 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           I +E  + N + + F WI DFP +   +EE KI   H+PFT P     SL   D LS+++
Sbjct: 413 IGKERNLYNESQYNFVWITDFPLF--AKEEGKICSEHHPFTSPLDEDISLLDTDPLSVRS 470

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+EIASG  R H +++  + FS + +S E ++ +FG    A   G PPH GI
Sbjct: 471 SSYDLVLNGYEIASGSQRIHNADLQNKIFSILELSPESIKEKFGFFIDALSFGTPPHLGI 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DRI+M+L GA+ +REV  FP +Q   DL+M +P+ +   QL+EL +++  
Sbjct: 531 ALGLDRIMMVLTGAEGIREVIAFPKTQKAADLMMNAPAEIMTSQLKELNIKVTS 584


>gi|260890443|ref|ZP_05901706.1| aspartate--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260860063|gb|EEX74563.1| aspartate--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 593

 Score =  575 bits (1482), Expect = e-162,   Method: Composition-based stats.
 Identities = 229/601 (38%), Positives = 356/601 (59%), Gaps = 15/601 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
            YR +   +L + +VG  V LSGW+ +VR  G   F+D+RD YGITQ++ N + +    F
Sbjct: 1   MYRNYKLNELRMENVGEEVILSGWISKVRDLGHFTFIDLRDRYGITQILVNEEVSGKELF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E  + +++EWV+ + G V  RS++  N NI TG IE+ A+ IEILS +++LP  +     
Sbjct: 61  EETRKLKNEWVIKVTGKVAERSSK--NKNIPTGDIEVEAKNIEILSRSKQLPFEIDETGN 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E++R  YR+LD+RR  +  NI+KR  ++ S+R  M    F++  TPIL  ++PEGARD
Sbjct: 119 LNENMRLTYRYLDIRRPKMLNNIIKRNDMLFSIRKFMNDNGFLDIDTPILAKATPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQ+LM SG D+Y+Q+A CFRDED R+DR P EF QLD+
Sbjct: 179 FIVPSRINKGDFYALPQSPQLFKQILMVSGVDKYYQLAKCFRDEDLRADRQP-EFTQLDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+EQ+DILN  E + + VF++ +      N F R+ YDDA+  YG+DKPDLR  + +
Sbjct: 238 EMSFIEQEDILNVTEALAKQVFKDVTGIEITEN-FERMSYDDAMNFYGSDKPDLRFEMKL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG-QPGLAY 358
            ++++   +  F VF   +      +    P      +R +   + ++ ++     GLAY
Sbjct: 297 IDLSKETQNCGFGVFENAIKDGGSVKAIVAP-NAEKFSRKYIKDLEDFVKTYFKAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +++E G +    P+AK         I  +L +++ +    +A             R 
Sbjct: 356 I--KINEDGEI--NSPIAKFFTEEKLAEITQKLGIKNNEIALILADKYKIVHDGLGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSI 477
            + +EL +I+ + F+F W++DFP +EW+EEE +    H+PFT  +      L  N+L  I
Sbjct: 412 KLGEELELIDKDSFKFLWVIDFPMFEWSEEENRYKAQHHPFTSIKQEDRKYLDSNELDKI 471

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K   YD+V NG+EI  G IR H  E+  + F  +G+SKE  +++FG      + G+PPHG
Sbjct: 472 KTDSYDMVLNGYEIGGGSIRIHEEELQEKVFEKLGLSKEEQQDKFGFFLEVLKYGVPPHG 531

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE-LGLRIVENPK 596
           G+A GIDR +M +L   +++EV  FP +    DL+ G+P+ +    L E L L+++E  K
Sbjct: 532 GLAFGIDRWLMAILKENSIKEVIPFPKTNKGQDLMTGAPAEIEENILTEDLRLKLLETEK 591

Query: 597 K 597
           +
Sbjct: 592 E 592


>gi|312977239|ref|ZP_07788987.1| aspartate--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|310895670|gb|EFQ44736.1| aspartate--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 617

 Score =  575 bits (1482), Expect = e-162,   Method: Composition-based stats.
 Identities = 221/608 (36%), Positives = 347/608 (57%), Gaps = 13/608 (2%)

Query: 1   MHR--YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-- 56
           M +   RT  CG++    +G  V L GWV RVR  G ++F+D+RD  G+ Q+V N DS  
Sbjct: 1   MEKIEKRTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGK 60

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +IA S+ +E+V+ + G V+ RS   +N ++ TGQ+E+ A +I IL+ A+  P  +  
Sbjct: 61  KLMDIADSLGNEYVVQVKGKVVKRSE--VNPDMKTGQVEVDATEIIILNKAKNPPFEIKD 118

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             E  E  R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEG
Sbjct: 119 GIEVSEQTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEG 178

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q
Sbjct: 179 ARDYLVPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQ 237

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +DMEMSF +++ I +  E +L+ + ++    + +     RI + D++ +YG DKPD R  
Sbjct: 238 IDMEMSFADEETIQSYTEGLLKKIMKDVKGID-LKTPIKRITWTDSMNKYGCDKPDTRYG 296

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           +++H+++  F  S+F+VFS  ++     +  A+       +R   D+  ++ +     GL
Sbjct: 297 MLIHDLSPIFKDSDFKVFSGAIADGGFVKGIAVKNGAKEYSRKKIDKKADFIKRFHAKGL 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A++ +   E G  +  GPVA+ L   N EA++   D++ G+   F+       C      
Sbjct: 357 AWVKF---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFVTDKWKVCCDSLDHL 411

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R   A+E GI+    ++F W++D+P +E++E   +   AH+PFTMP      L   +   
Sbjct: 412 RREFAKETGIVPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHK 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG E+  G IR H   +    F  +G +K+    +FG L  A   G PPH
Sbjct: 472 AHARSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+A G+DR  M+L    N+R+VS FP + +  + +M +P+ V+ +QL +LG+ + E  +
Sbjct: 532 AGLAIGLDRFAMMLADKDNIRDVSAFPKNASASEPMMHAPAPVADQQLADLGIEVEEKYQ 591

Query: 597 KILKISVT 604
             +K +  
Sbjct: 592 DSVKATEE 599


>gi|224103793|ref|XP_002313196.1| predicted protein [Populus trichocarpa]
 gi|222849604|gb|EEE87151.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  575 bits (1482), Expect = e-162,   Method: Composition-based stats.
 Identities = 231/596 (38%), Positives = 336/596 (56%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT+ CG L  +DVG+ VRL GWV   R HGG+ FL++RDH GI     +       I   
Sbjct: 74  RTNFCGQLSTNDVGTRVRLCGWVALHRVHGGLTFLNLRDHTGIVATSPDEFPDAHSIIND 133

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-----VFGERE 119
           +R E+V+ ++G V SR  E++N  +ITG IE+ A+ +++L+  +             +  
Sbjct: 134 LRVEYVVVVEGFVRSRPVESVNKKLITGSIEVVAEHVQLLNAVKAKLPFLVTTADDAKDS 193

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGAR 178
             E IR +YR LDLRR  +  NI+ R R++  +R  +   + F+E  TPIL+ S+PEGAR
Sbjct: 194 VKEEIRLRYRCLDLRRQQMSSNIMLRHRVVKLIRRYLEDVQGFVEIETPILSRSTPEGAR 253

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR+  G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF QLD
Sbjct: 254 DYLVPSRIQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQLD 312

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           ME++F   +D+L   E+++R VF E      + N   R+ Y +A+ +YG+D+PD R  + 
Sbjct: 313 MELAFTTLEDMLRLNEDLIRKVFLEIKGV-QLPNPIPRLTYAEAMSKYGSDRPDTRFDLH 371

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR---AFCDRMNEWARSQGQPG 355
           +  V++ F  S FRVF+  L+     +V  +P+     +       D  NE  +S G  G
Sbjct: 372 LKEVSDIFAESSFRVFADSLNSGGIIKVLCVPSGAKSYSNSALKKGDIYNEAIKS-GAKG 430

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L ++  ++ + G + G+  +   L+  N E +  R     GD   F  G           
Sbjct: 431 LPFL--KVLDDGELEGISALVSSLDSTNKEQLLSRCSAGPGDLILFAVGHHPSVHRTLDR 488

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  IA +LG+++ +     W+ DFP +EWNE E++++  H+PFT P          DL 
Sbjct: 489 LRLFIANQLGLVDHSRHSILWVTDFPMFEWNETEQRLEALHHPFTAPNPEDM----EDLS 544

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           S +A  YD+V NG EI  G +R +  EV  +    VGIS E  E +FG L  A   G PP
Sbjct: 545 SARALAYDMVYNGVEIGGGSLRIYKREVQQKVLEIVGISPEQAEAKFGYLLEALDMGAPP 604

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGGIA G+DR+ MLL GA ++R+V  FP +      L  +PS V  +QLR+L   I
Sbjct: 605 HGGIAYGLDRLAMLLAGATSIRDVIAFPKTTTAQCALTRTPSEVDPQQLRDLSFSI 660


>gi|257126613|ref|YP_003164727.1| aspartyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257050552|gb|ACV39736.1| aspartyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 591

 Score =  575 bits (1482), Expect = e-162,   Method: Composition-based stats.
 Identities = 229/600 (38%), Positives = 357/600 (59%), Gaps = 15/600 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
            YR +   +L + ++G  V LSGWV +VR  G   F+D+RD YGITQ++ N + +    F
Sbjct: 1   MYRNYKLNELKMENIGEEVVLSGWVSKVRDLGHFTFIDLRDRYGITQILVNEEVSGKELF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E A+ +++EWV+ + G V  RS++  N NI TG IE+ A+ IEILS +++LP  +     
Sbjct: 61  EEARKLKNEWVIKVTGKVAERSSK--NKNIPTGDIEVEAKNIEILSRSKQLPFEIDETGN 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E++R  YR+LD+RR  +  NI+KR  ++ S+R  M    F++  TPIL  ++PEGARD
Sbjct: 119 LNENMRLTYRYLDIRRPRMLNNIIKRNDMLFSIRKFMNENGFLDIDTPILAKATPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSR+N+G FYALPQ+PQ +KQ+LM SG D+Y+Q+A CFRDED R+DR P EF QLD 
Sbjct: 179 FIVPSRINKGDFYALPQSPQLFKQILMVSGVDKYYQLAKCFRDEDLRADRQP-EFTQLDF 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFVEQ+DILN  E++ + VF++ +      N F R+ YDDA+  YG+DKPDLR  + +
Sbjct: 238 EMSFVEQEDILNVTESLAKQVFKDVTGIEITEN-FERMSYDDAMNFYGSDKPDLRFDMKL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG-QPGLAY 358
            ++++   +  F VF   +      +    P      +R +   + ++ ++     GLAY
Sbjct: 297 IDLSKETQNCGFGVFENAVKDGGSVKAIVAP-NAEKFSRKYIKDLEDFVKTYFKAKGLAY 355

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I  +++E+G +    P+AK         I  +L +++ +    +A             R 
Sbjct: 356 I--KINENGEI--NSPIAKFFTEEKLAEITQKLGIKNNEIALILADKYKIVHDGLGALRL 411

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSI 477
            + +EL +IN + F+F W++DFP +EW+EEE +    H+PFT  +      L  N+L  I
Sbjct: 412 KLGEELELINKDSFKFLWVVDFPMFEWSEEENRYKAQHHPFTSIKQEDRKYLDSNELDKI 471

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K   YD+V NG+EI  G IR H  E+  + F  +G+SKE  +++FG      + G+PPHG
Sbjct: 472 KTDSYDIVLNGYEIGGGSIRIHEEELQEKVFEKLGLSKEEQQDKFGFFLEVLKYGVPPHG 531

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE-LGLRIVENPK 596
           G+A GIDR +M +L   +++EV  FP +    DL+ G+P+ +    L E L +++++  +
Sbjct: 532 GLAFGIDRWLMAMLKENSIKEVIPFPKTNKGQDLMTGAPAEIEENILAEDLRIKLLKVEE 591


>gi|309805175|ref|ZP_07699227.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165409|gb|EFO67640.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 612

 Score =  575 bits (1481), Expect = e-162,   Method: Composition-based stats.
 Identities = 216/592 (36%), Positives = 339/592 (57%), Gaps = 11/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG++        V + GWV RVR  G +IF+D+RD  GI QVV N DS  A  ++A
Sbjct: 4   RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +E+V+ + G V+ RS   +N  I TG++E++A  I +L+ ++  P  +  +    E
Sbjct: 64  QKLGNEYVVEVQGKVVRRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR +L  +I+ R++I++++      E F+   TP L  S+PEGARD+LV
Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S
Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  +    E +L+ V ++    + V+    RI +D+A+ +YG+DKPD+R  + +H++
Sbjct: 241 FLDEKGVQIYTEGLLKKVMKDVMGIDIVTPI-KRITWDEAMNKYGSDKPDIRYDMHLHDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +E F  SEF+VF+  LS     +  A+       +R   +   E+ +     G+A++ + 
Sbjct: 300 SEIFKDSEFKVFADTLSNGGVIKGIAVKGGAEAYSRKKIEEKQEYIKRYHAKGIAWVKYE 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                N    GP+A+ L       +    ++  G+    IA             R   A+
Sbjct: 360 -----NGEFTGPIARFLTENQKRDLISEFELTGGELITIIADIWKVVTDSLDYLRRTFAK 414

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E GII  + F+F W++D+P +E++E +++   AH+PFTMP      L   +     A  Y
Sbjct: 415 ETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHARSY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG+E+  G IR H  E+  + F  +G +KE    +FG L  A   G PPH G+A G
Sbjct: 475 DIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFLLEALDMGFPPHAGLAIG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +DR  MLL    N+R+V  FP + +  + +M SP+ V+ +QL +LG+ ++  
Sbjct: 535 LDRFAMLLAEKDNIRDVIAFPKNASASEPMMHSPAPVADKQLADLGINVMSE 586


>gi|296394114|ref|YP_003658998.1| aspartyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181261|gb|ADG98167.1| aspartyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 601

 Score =  575 bits (1481), Expect = e-162,   Method: Composition-based stats.
 Identities = 237/602 (39%), Positives = 330/602 (54%), Gaps = 27/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G+L  + +G+ V L+GWV R R HGG+IF+D+RD  GI QVV   D      A +
Sbjct: 2   RTHLAGELRENHIGTDVVLTGWVARRRDHGGVIFVDLRDKSGIAQVVF-RDGDVLARAHA 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ L I+G+V  R   + NA + +G +E+     E+LS +  LP P+  +    E  
Sbjct: 61  LRAEYCLKINGVVDRRPEGSENAALGSGAVEVGVTSFEVLSESAPLPFPL--DEPPGEET 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           RF YR+LDLRR    + +  R+ +  + R  ++  +F E  TP LT S+PEGARDF+VP+
Sbjct: 119 RFHYRYLDLRRPEAAQMLRLRSTLNAAARRVLLDRDFTEVETPTLTRSTPEGARDFIVPA 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  GS+YALPQ+PQ +KQLLM +G +RYFQ+A C+RDED R+DR P EF QLD+EMSFV
Sbjct: 179 RLKPGSWYALPQSPQLFKQLLMVAGLERYFQLARCYRDEDFRADRQP-EFTQLDLEMSFV 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            QDD++   E V+  V+              RI Y +A+RRYG+DKPDLR  + + + T+
Sbjct: 238 TQDDVIALAEEVVAAVWGVLG--EAPELPLPRISYAEAMRRYGSDKPDLRFGVELVDCTD 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +F  + FRVF         +    + A G G  R   D   +WAR +G  GLAY+   + 
Sbjct: 296 YFKDTPFRVFQA------EHVGAVVMAGGAGQPRRALDGWQDWARQRGAKGLAYVL--IG 347

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G ++  GPVAK+L+    + +   +  + GD  FF AGD     S    AR  IA  L
Sbjct: 348 EDGELS--GPVAKNLSEAERDGLAEHVGAKPGDCVFFAAGDANSARSLLGAARVEIATRL 405

Query: 425 GIIN-CNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGND 473
           G+++    + F W++DFP  E   +          E      H+ FT P     +    D
Sbjct: 406 GLLDNAPKWAFAWVVDFPLLEPAAQAKAAGDVAVGEGAWTAVHHAFTAPSEESLATLEQD 465

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             S  +  YDLVCNG EI  G IR H  EV  +    +G  +E  +  FG L  AF  G 
Sbjct: 466 PGSALSQAYDLVCNGHEIGGGSIRIHRREVQERVLKLMGFDQERAQAAFGFLLDAFSYGP 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGG+A G DRI  LL G  ++REV  FP S    D L G+P  ++  Q  E G+    
Sbjct: 526 PPHGGMAFGWDRITALLAGVDSIREVIAFPKSGGGQDPLTGAPGAITPSQRAETGVDFKP 585

Query: 594 NP 595
            P
Sbjct: 586 GP 587


>gi|229820498|ref|YP_002882024.1| aspartyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|259511852|sp|C5C5S1|SYD_BEUC1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229566411|gb|ACQ80262.1| aspartyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 601

 Score =  575 bits (1481), Expect = e-162,   Method: Composition-based stats.
 Identities = 240/615 (39%), Positives = 328/615 (53%), Gaps = 34/615 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT   G L        V L+GWV R R HGG+ F+D+RD  GI QVV   ++    +A  
Sbjct: 3   RTSPAGSLRAEHTAQVVTLTGWVDRRRDHGGVAFIDLRDASGIAQVVIRDEA----VAHP 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV----FGEREY 120
           +R+E+VL + G V  R A   N N+ TG+IE+ A  + +L+ A  LP  V          
Sbjct: 59  LRNEFVLQVTGEVSRRPAGNENPNLPTGEIEVVASDVVVLNSAAALPFQVSTALADTEAI 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR    + I  R +   + R  + AE F+E  TP LT S+PEGARDF
Sbjct: 119 GEEVRLKYRYLDLRRPAPARAIRLRAKANQAARRVLDAEEFVEIETPTLTRSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R+  GS+YALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD+E
Sbjct: 179 LVPARLAPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLDVE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQDD++   E VL  ++E      T+     R+ +DDA+R YGTDKPDLR    + 
Sbjct: 238 MSFVEQDDVIALAEKVLVALWELIG--FTIPTPIPRMTFDDAMRLYGTDKPDLRFGNPIV 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +T +F  + FRVF         Y    + A G    R   D   EWA+ +G  GLAY+ 
Sbjct: 296 ELTSYFADTPFRVFQS------EYVGAVVMAGGASLPRRQFDAWQEWAKQRGARGLAYVT 349

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +  D S      GPVAK+L+      +R       GD+ FF AG      +    AR  I
Sbjct: 350 FPEDGS---DLGGPVAKNLSDAERAGLREATGAAPGDAVFFAAGATTPSRALLGAARQEI 406

Query: 421 AQELGIIN----CNCFEFCWIMDFPFYEWNEEEKK----------IDFAHNPFTMPQGGM 466
           A+  G+I+       + F W++D P ++   +                 H+ FT P    
Sbjct: 407 AKRTGLIDSADQEGAWAFVWVVDAPLFKPTGDAADDGDVALGHSAWTAVHHAFTSPTPEW 466

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
                 D  S  +  YD+VCNG EI  G IR H  +V  + F  +GI     + +FG L 
Sbjct: 467 IDTFEQDPGSALSNAYDIVCNGNEIGGGSIRIHRRDVQERVFQVMGIDAAEAQEKFGFLL 526

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            AF  G PPHGGIA G DRI+ LL G++++REV  FP S    D L  +P+ ++ EQ RE
Sbjct: 527 DAFSYGAPPHGGIAFGWDRILALLTGSESIREVIAFPKSGGGYDPLTQAPAPITAEQRRE 586

Query: 587 LGLRIVENPKKILKI 601
            G+  V + +   + 
Sbjct: 587 SGVDAVPDDETAPQA 601


>gi|295692849|ref|YP_003601459.1| aspartyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030955|emb|CBL50434.1| Aspartyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 617

 Score =  575 bits (1481), Expect = e-161,   Method: Composition-based stats.
 Identities = 222/608 (36%), Positives = 348/608 (57%), Gaps = 13/608 (2%)

Query: 1   MHR--YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-- 56
           M +   RT  CG++    +G  V L GWV RVR  G ++F+D+RD  G+ Q+V N DS  
Sbjct: 1   MEKIEKRTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGK 60

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +IA S+ +E+V+ + G V+ RS   +N ++ TGQ+E+ A +I IL+ A+  P  +  
Sbjct: 61  KLMDIADSLGNEYVVQVKGKVVKRSE--VNPDMKTGQVEVDATEIIILNKAKNPPFEIKD 118

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             E  E  R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEG
Sbjct: 119 GIEVSEQTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEG 178

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q
Sbjct: 179 ARDYLVPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQ 237

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +DMEMSF +++ I +  E +L+ + ++    + +     RI + D++ +YG DKPD R  
Sbjct: 238 IDMEMSFADEETIQSYTEGLLKKIMKDVKGFD-LKTPIKRITWTDSMNKYGCDKPDTRYG 296

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           +++H+++  F  S+F+VFS  ++     +  A+       +R   D+  ++ +     GL
Sbjct: 297 MLIHDLSPIFKDSDFKVFSGAIADGGFVKGIAVKNGAKEYSRKKIDKKADFIKRFHAKGL 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A++ +   E G  +  GPVA+ L   N EA++   D++ G+   F+A      C      
Sbjct: 357 AWVKF---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFVADKWKVCCDSLDHL 411

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R   A+E GI+    ++F W++D+P +E++E   +   AH+PFTMP      L   +   
Sbjct: 412 RREFAKETGIVPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHK 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG E+  G IR H   +    F  +G +K+    +FG L  A   G PPH
Sbjct: 472 AHARSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+A G+DR  M+L    N+R+VS FP + +  + +M +P+ V+ +QL +LG+ + E  +
Sbjct: 532 AGLAIGLDRFAMMLADKDNIRDVSAFPKNASASEPMMHAPAPVADQQLADLGIEVEEKYQ 591

Query: 597 KILKISVT 604
             +K +  
Sbjct: 592 DSVKATEE 599


>gi|15673947|ref|NP_268122.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|24212420|sp|Q9CE80|SYD_LACLA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|12725007|gb|AAK06063.1|AE006426_9 aspartyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|326407503|gb|ADZ64574.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 590

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 221/604 (36%), Positives = 342/604 (56%), Gaps = 24/604 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RT+  G++    +   V + GWV + R  GG+IF+D+RD  GI Q+V NP++A  ++A
Sbjct: 1   MKRTNYAGNITEEYLNQTVTVKGWVAKRRNLGGLIFIDLRDREGIVQIVVNPETAAADVA 60

Query: 63  KSV---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           ++    R+E+VL + G V+ R+++  N  I TG IE+ A  IEILS ++  P  +  + E
Sbjct: 61  EAADKARNEFVLEVTGKVVERASK--NDKIKTGGIEIEATAIEILSTSKTTPFEIKDDVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R KYR+LDLRR  + KNI  R     S+R  +    FI+  TP L  S+PEGARD
Sbjct: 119 VLDDTRLKYRYLDLRRPEMLKNITMRHATTRSIREYLDGAGFIDVETPFLNKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +G DRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGEFYALPQSPQLMKQLLMTAGLDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ +++I +  E ++  V ++    + V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEEEIQDLTEELIAKVMKDVKGID-VTLPFPRMKYDDAMNFYGSDKPDTRFELLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +++      +F+VF +        +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 TDLSALAKTIDFKVFQEA----EVVKAIVVKDAADKYSRKSIDKLTEQAKQNGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +   E       G V+K L   +T++    L + D D   F+A       S     R  
Sbjct: 353 KFEKGE-----FAGGVSKFL-AESTDSFVNELKLTDNDLVLFVADSLDVANSALGALRLT 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK-------GN 472
           I ++ G+I+   F F W++D+P +EW++EE++   AH+PFT+P    ++          +
Sbjct: 407 IGKQQGLIDFRQFNFLWVIDWPMFEWSDEEERYMSAHHPFTLPTKETQAFLSADGHSKDS 466

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DL  ++A  YD+V NG+E+  G +R +  ++  +  S +G   E    +FG L  A   G
Sbjct: 467 DLKKVRAHAYDIVLNGYELGGGSLRINTRQLQEEMLSALGFKLEDANEQFGFLLEALDYG 526

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG+A G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL +++ 
Sbjct: 527 FPPHGGLALGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSIVAEKQLEELSIKLA 586

Query: 593 ENPK 596
              +
Sbjct: 587 NKDQ 590


>gi|116071892|ref|ZP_01469160.1| Aspartyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116065515|gb|EAU71273.1| Aspartyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 610

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 215/603 (35%), Positives = 335/603 (55%), Gaps = 22/603 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R++ CGDL    + + V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F +A
Sbjct: 2   RSNGCGDLRKDSIDAVVQLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGAEAFAVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGERE 119
           + +RSE VL + G V +R AE++N  + TG +E+ A +I +L+        P+ V  E  
Sbjct: 62  EHLRSETVLQVHGKVRARPAESLNDKLATGAVEVLASEIVVLNKVTGNLPFPVSVHDEEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R ++R+LDLRR  ++ N+  R R I   R  +  E FIE  TP+LT S+PEGARD
Sbjct: 122 TREELRLRHRYLDLRRKRMNDNLRLRARTIQVARRFLEDEGFIEVETPVLTRSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+
Sbjct: 182 YVLPSRVCGGDWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ ++ IL   E+++  +++       +   F R+ + DA+ RYGTD+PD R  + +
Sbjct: 241 EMSFMGEEQILQLNEDLICAIWKSVKGIE-LPRPFPRMTWHDAMERYGTDRPDTRYGMEL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNEWARSQGQPGLAY 358
             V++      F+VFS  +      +V A+P      +        + ++ +Q       
Sbjct: 300 VTVSDIVQDMGFKVFSGAVKSGGAVKVIAVPGGNDALSNVRIKPGGDVFSEAQAAGAGGL 359

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
            F R+ + G +  +G +  +L+      +  R     G    F AG+           R 
Sbjct: 360 AFIRVRDGGEIDTIGAIKDNLSDEQKAELLERTGATPGTLLLFGAGETAIVNKALDRVRQ 419

Query: 419 HIAQELGIINCN----CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           ++A+EL ++  +     + F W++DFP +E+N +E + +  H+PF  P        G+D 
Sbjct: 420 YLAKELKLVQPDRQNDAWNFLWVVDFPMFEFNGDEDRYEALHHPFCAPNTDD---LGSDP 476

Query: 475 L-------SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                   S +A  YDLV NG E+  G +R H S +  Q    VG+  E  + +FG L  
Sbjct: 477 AQWATTLPSARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQEQFGFLIN 536

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           A   G PPHGG+A GIDR+VMLL G +++R+   FP +Q    L+  +PS+V+ +QL+EL
Sbjct: 537 ALDMGAPPHGGLAFGIDRMVMLLAGEESIRDTIAFPKTQQARCLMTDAPSSVAEKQLQEL 596

Query: 588 GLR 590
            + 
Sbjct: 597 HVS 599


>gi|255038351|ref|YP_003088972.1| aspartyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254951107|gb|ACT95807.1| aspartyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 589

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 225/601 (37%), Positives = 326/601 (54%), Gaps = 23/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEI 61
           RTH+CG+L +  V   V L GWV RVR  GG+I+LD+RD YGITQ++           E 
Sbjct: 3   RTHTCGELSLGHVNQDVVLCGWVQRVRDKGGMIWLDLRDRYGITQLLFEEGKTPANVLET 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+S+  E+V+   G V+ R A+  N  I TG IE+   ++ IL+ A+  P  +  E +  
Sbjct: 63  ARSLGREFVISAKGAVIERLAK--NDKIATGDIEIRVAELTILNPAKLPPFLIEDETDGG 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + IR KYR+LDLRR+ + KN+  R ++    R  +   NFIE  TP+L  S+PEGARDF+
Sbjct: 121 DDIRMKYRYLDLRRNVVRKNLQLRHQVARYTRAYLDNLNFIEVETPVLIKSTPEGARDFV 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D EM
Sbjct: 181 VPSRMNPGEFYALPQSPQTFKQLLMVAGFDRYYQIVKCFRDEDLRADRQP-EFTQIDCEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV Q+D+LNT E ++R +F +    +       R+ Y DA+R YG+DKPD R  +    
Sbjct: 240 SFVTQEDVLNTFEGMIRELFSKVKGIDLPEV--PRVTYADAMRLYGSDKPDTRFEMQFVE 297

Query: 302 VT----EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPG 355
           +     +      F VF     V              G  R   D + +W +    G  G
Sbjct: 298 LKGDDRDLTSGKGFGVFDDAGLVVGINASGC-----AGYTRKQVDELTDWIKRPQIGAKG 352

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y+ +  D     +    V K  +    +      D + GD    ++G   K      +
Sbjct: 353 LVYVRYNADG----SIKSSVDKFYSEEELKKWVEAFDAKPGDLLLILSGQGDKTRKQLNE 408

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  I   LG+ N + +   W++DFP  E+ EEE +    H+PFT P+     L   +L 
Sbjct: 409 LRLEIGSRLGLRNPDEYRALWVIDFPLLEFGEEENRWFAMHHPFTSPKPEDVDLLDKNLG 468

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            ++A  YD+V NG E+  G +R    E+  + F  +G S E  + +FG L  AF+ G PP
Sbjct: 469 QVRANAYDMVINGVEVGGGSVRIFEKELQRKMFEILGFSAEEAQEQFGFLMNAFEFGAPP 528

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           H GIA G DR+  +  GA ++R+   FP + +  D+++ SPS +S  QL+EL +++ E  
Sbjct: 529 HAGIAFGFDRLCSIFGGADSIRDFIAFPKNNSGRDVMIDSPSAISDAQLKELAIKVAETA 588

Query: 596 K 596
           +
Sbjct: 589 Q 589


>gi|330836108|ref|YP_004410749.1| aspartyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748011|gb|AEC01367.1| aspartyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 618

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 243/596 (40%), Positives = 342/596 (57%), Gaps = 12/596 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EI 61
            RT +CG L  +D G  V L+GWVHR R HG + F+++RD YGITQVV + D++      
Sbjct: 29  KRTVTCGQLTAADNGRKVVLNGWVHRDRNHGALHFINLRDRYGITQVVVDDDASPELSAT 88

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+R E+ + ++G+V  R    +N ++ TG++E+ A +I+ILS    LP  +  E +  
Sbjct: 89  AASLRMEFCVAVEGIVRLRPDSMVNKDMHTGEVEVKAIRIDILSTCPALPFMIDEETDAK 148

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R  YR+LDLR   + K I  R   + ++R  +   NF E  TP L  S+PEGARDFL
Sbjct: 149 EDTRLTYRYLDLRSGGMQKRIRLRHEFVKAIRQYLYTTNFYEIETPTLIKSTPEGARDFL 208

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ  KQ+LM SGFDRYFQIA C+RDED R DR   EF QLDMEM
Sbjct: 209 VPSRLYPGKFYALPQSPQLLKQILMVSGFDRYFQIARCYRDEDARGDRQL-EFTQLDMEM 267

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV +DD+L  +E +   VF++  N   +   F R+ Y D++  YG DKPDLR  + + +
Sbjct: 268 SFVTRDDVLELIEKLFGYVFDKVMNY-RLPVKFRRLTYHDSMNTYGNDKPDLRFDLPIVD 326

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAK-GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +      + F  F+  L+     +   +PA+ G   +R F D + E A   G   L +I 
Sbjct: 327 IGLLATKTNFDAFTGALAAGGVVKALRVPAQEGVSFSRKFIDGLAEAAAVYGARNLGWI- 385

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNH 419
            ++ + G     G V+K    +  + +   L+ + GD   FI      K C+     R+ 
Sbjct: 386 -KVGDDG--TFTGGVSKFFAGLE-DELSASLEAKPGDLLLFIAHPQWKKACTSMGAIRSK 441

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + ++LG+I    FEFCWI+DFP +E+NEE +  + AH+ F+MPQ    S   +D  S+K 
Sbjct: 442 LGKDLGLIRPG-FEFCWIIDFPLFEFNEETEHWEAAHHMFSMPQTEYISTLESDPGSVKG 500

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+E+ASG IR H  E+  + F     S E  E RFG L  AF+ G PPHGGI
Sbjct: 501 DLYDLVLNGYEVASGSIRIHDVELQKRIFRICNFSDEEAEKRFGFLLDAFRYGAPPHGGI 560

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A GIDR+VM++    +++EV  FP +      +  SPS V  +QL EL L I +  
Sbjct: 561 APGIDRMVMIMAEQTSIKEVIAFPKNTAAISPMDDSPSEVDGKQLDELHLIIKKQA 616


>gi|317481697|ref|ZP_07940729.1| aspartyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916811|gb|EFV38201.1| aspartyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 599

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 226/610 (37%), Positives = 340/610 (55%), Gaps = 33/610 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V L+GWV R R HGG+ F+D+RD  G+ QVV        ++A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVI----YDEDMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFG 116
            +RSE+V+ I G V  R     N +++TG+IE+ A+ IEIL+ ++ LP            
Sbjct: 62  PLRSEFVIQITGEVRLRPDGNENTHLVTGKIEVVAETIEILAKSDALPFQVSTALENESE 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM++V+Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +TE+F ++ FRVF         Y    +   G    R   D   +WAR +G  GL
Sbjct: 299 NPLVELTEYFKNTPFRVFQAP------YVGAVVFKGGAATPRRQFDAWQDWARQRGAKGL 352

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E+G +   GPVAK+L+      +R  +  ++GD+ FF AG            
Sbjct: 353 AYVVF--GENGELK--GPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESAQLLLGAV 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A   G+++   F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 409 RVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H  ++  +    +GI+KE  + +FG L  
Sbjct: 469 DKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGFLLE 528

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH G+A G DR V +L GA ++R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 529 AFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAET 588

Query: 588 GLRIVENPKK 597
           G+    + ++
Sbjct: 589 GVDYDPDAEE 598


>gi|222100026|ref|YP_002534594.1| Aspartyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254781759|sp|B9K8E5|SYD_THENN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|221572416|gb|ACM23228.1| Aspartyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 579

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 239/590 (40%), Positives = 339/590 (57%), Gaps = 15/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L V D G  V+L GWV R+R  GG+ F+D+RD YG TQ+V + +S  +E    
Sbjct: 3   RTHTCGELRVEDEGKKVKLCGWVDRIRDLGGVRFIDLRDRYGETQIVCDVNSKAYETVDE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E V+ ++G V  R   T N NI TG+IE+ A++IEILS AE   LP +      E +
Sbjct: 63  LTRESVVLVEGTVRRRPEGTENPNIATGEIEVVAERIEILSKAEP--LPFYPNETPKEEM 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR++DLR   +  NI+ R  I   +R       F+E  TP LT S+PEGARDFLVPS
Sbjct: 121 RLRYRYIDLRSKRMRDNIILRYNITRVIRRYFDELGFLEIETPFLTKSTPEGARDFLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G FYALPQ+PQ +KQLLM SGFDRYFQI  CFRDED R+DR P EF Q+D+EMSFV
Sbjct: 181 RLRPGKFYALPQSPQLFKQLLMISGFDRYFQIVRCFRDEDLRADRQP-EFTQVDVEMSFV 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +D+L+  E ++  VF E    + +   F RI Y +A+ +YGTDKPD R  + + ++  
Sbjct: 240 DVEDVLSVSEGMIARVFREAIGMD-LKTPFDRITYSEAMEKYGTDKPDRRYGMELRDLGY 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  + FRV   +L      + + +P       R   D + E A+  G  GL +      
Sbjct: 299 AFEGTTFRVIRSVLEEGGSVKGFVVPEFASEMTRKKGDELMERAKELGLGGLIWFKV--- 355

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHIAQE 423
                  + P  KHL     + I  + ++++GD C      D           R  I +E
Sbjct: 356 ---EEKIVSPHLKHL-EREFKTIVEKENLKEGDVCLIAAHKDRNLLNEALGTLRLEIGKE 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
                   F+  W++DFP++EW+EEE++    H+PFTMP        G+D   +KA  YD
Sbjct: 412 YFSHLAKGFDILWVVDFPYFEWSEEEERFVARHHPFTMPVEET---LGDDHTKVKAKAYD 468

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G IR H  E+  + F  +G+ +E    +FG    AF+ G+PPHGGIA G+
Sbjct: 469 IVINGYEVGGGSIRIHKREIQEKIFKLLGMREEEAREKFGFFLEAFKYGVPPHGGIAFGL 528

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           DR+V ++ G  ++REV  FP + N   LL G+PS+V  +QLREL +R+ E
Sbjct: 529 DRLVAIIAGENSIREVIPFPKTGNGVCLLTGAPSSVDEKQLRELRIRVEE 578


>gi|57242599|ref|ZP_00370536.1| aspartyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57016528|gb|EAL53312.1| aspartyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 583

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 232/596 (38%), Positives = 341/596 (57%), Gaps = 18/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H   DL  +++G  VRL GWV+  R HGG+IF+D+RD  G+ Q+V +P+      +IA
Sbjct: 2   RSHYNTDLNKANIGEEVRLCGWVNSYRDHGGVIFIDLRDRSGLIQLVCDPNDSQKAHKIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SVR+E+VL   G V  R    INA + TG+IE+   ++ + + +  +P    G+    E
Sbjct: 62  SSVRNEFVLIAHGKVRPRGEGLINAKLKTGEIEVVVSELIVENES-MVPPFAIGDESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYRFLDLR   L++N   R++   + R  +    F+E  TPILT ++PEGARD+LV
Sbjct: 121 ELRLKYRFLDLRNPRLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+QG FYALPQ+PQ +KQLLM + FDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHQGEFYALPQSPQLFKQLLMCANFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F EQ D++   E  L+ +F        +   F ++ Y +A+  YG+DKPDLR  + + +V
Sbjct: 240 FCEQKDVMAVAETFLKDIFAACGKQ--IRTPFRQMSYKEAMENYGSDKPDLRFDLKLIDV 297

Query: 303 TEHFVHSEFRVFSKILSV--NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I         +   +P      ++    R  E+ R  G  GLA+I 
Sbjct: 298 IDIFAKSNNEIFTNIAKDPYKNRIKALKVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K     + + +  R  ++ GD  FF AG       +    R  +
Sbjct: 358 AKED-----GLKGPLCKFFGEEDLKELEKRCKLEVGDVVFFGAGVKKVVLDYMGRFRLFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL +++ N  EF W++DFP +E N++       H+PFTMP+   E     +L  I + 
Sbjct: 413 AEELKLLDSNALEFLWVVDFPMFEKNDD-GSYSAMHHPFTMPKNIDE----ENLEEISSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H +E+  + F  + I++E    +FG L  A   G PPHGGIA
Sbjct: 468 AYDVVLNGVELGGGSIRIHKNEIQQKVFKLLNINEEEQREKFGFLLDALSFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+  A ++REV  FP +Q    L+  +PS  S E +RELGL++ E+ K
Sbjct: 528 IGLDRLIMLVSKASSIREVIAFPKTQRAQCLMTEAPSEASKEAMRELGLKLRESVK 583


>gi|256843055|ref|ZP_05548543.1| aspartyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256614475|gb|EEU19676.1| aspartyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
          Length = 617

 Score =  573 bits (1478), Expect = e-161,   Method: Composition-based stats.
 Identities = 223/608 (36%), Positives = 348/608 (57%), Gaps = 13/608 (2%)

Query: 1   MHR--YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-- 56
           M +   RT  CG++    +G  V L GWV RVR  G ++F+D+RD  G+ Q+V N DS  
Sbjct: 1   MEKIEKRTDYCGNITEKYIGQDVNLYGWVQRVRNLGNLVFIDLRDREGLVQIVVNKDSGK 60

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +IA S+ +E+V+ + G V+ RS   +N ++ TGQ+E+ A +I IL+ A+  P  +  
Sbjct: 61  KLMDIADSLGNEYVVQVKGKVVKRSE--VNPDMKTGQVEVDATEIIILNKAKNPPFEIKD 118

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             E  E  R KYR+LDLRR  + + I+ R++I+ +         FI+  TPIL  SSPEG
Sbjct: 119 GIEVSEQTRLKYRYLDLRRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEG 178

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR+  GSFYALPQ+PQ +KQLLM +GFD+Y+Q+A CFRDED R DR P EF Q
Sbjct: 179 ARDYLVPSRIYPGSFYALPQSPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQP-EFTQ 237

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +DMEMSF +++ I +  E +L+ + ++    + +     RI + D++ +YG DKPD R  
Sbjct: 238 IDMEMSFADEETIQSYTEGLLKKIMKDVKGID-LKTPIKRITWTDSMNKYGCDKPDTRYG 296

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           +++H+++  F  S+F+VFS  ++     +  A+       +R   D+  ++ +     GL
Sbjct: 297 MLIHDLSPIFKDSDFKVFSGAIADGGFVKGIAVKNGAKEYSRKKIDKKADFIKRFHAKGL 356

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A++ +   E G  +  GPVA+ L   N EA++   D++ G+   F+A      C      
Sbjct: 357 AWVKF---EDGEFS--GPVARFLTDENKEALKKEFDLEGGELVVFVADKWKVCCDSLDHL 411

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R   A+E GII    ++F W++D+P +E++E   +   AH+PFTMP      L   +   
Sbjct: 412 RREFAKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEPHK 471

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             A  YD+V NG E+  G IR H   +    F  +G +K+    +FG L  A   G PPH
Sbjct: 472 AHARSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAYEQFGYLMDALDMGFPPH 531

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+A G+DR  M+L    N+R+VS FP + +  + +M +P+ V+ +QL +LG+ + E  +
Sbjct: 532 AGLAIGLDRFAMMLADKDNIRDVSAFPKNASTSEPMMHAPAPVADQQLADLGIEVEEKYQ 591

Query: 597 KILKISVT 604
             +K +  
Sbjct: 592 DSVKATEE 599


>gi|257790368|ref|YP_003180974.1| aspartyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|325833720|ref|ZP_08166135.1| aspartate--tRNA ligase [Eggerthella sp. HGA1]
 gi|257474265|gb|ACV54585.1| aspartyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|325485260|gb|EGC87730.1| aspartate--tRNA ligase [Eggerthella sp. HGA1]
          Length = 592

 Score =  573 bits (1478), Expect = e-161,   Method: Composition-based stats.
 Identities = 222/598 (37%), Positives = 344/598 (57%), Gaps = 16/598 (2%)

Query: 1   MHRY--RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           M+ Y   T +CG+L   DVG  V L GW    R HGG+IF+D+RD  G TQVV +PD   
Sbjct: 5   MNEYCMHTATCGELRKGDVGREVVLCGWAWHNRDHGGLIFVDLRDRAGYTQVVVDPDCVS 64

Query: 59  ---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
              F  A+ +  E+VL I G V  R AE +N N+ TG+IE+ A+ +E+L+ +   P  + 
Sbjct: 65  ADDFAKAEHLGREYVLKIAGTVRERGAEAVNPNMATGEIEVLAKSVEVLNTSVTPPFSIE 124

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
              E  E+ R K+R+LD+RR  +++ +  R ++  +MR  +    F+E  TPIL  S+PE
Sbjct: 125 DGIETDETTRMKWRYLDIRRPEMYQALHLRHKVAQAMRGALNERGFLEVETPILANSTPE 184

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARD++VPSR N G FYALPQ+PQQ+KQ+LM  G +RY+QIA CFRDED R+DR P EF 
Sbjct: 185 GARDYIVPSRPNPGRFYALPQSPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQP-EFT 243

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           Q+D+EM FV+ +D++N ME+V+          +       R+ Y +++ R+G D+PD R 
Sbjct: 244 QVDIEMGFVQGEDVMNLMEDVMAETLAAVGVEHAFPLQ--RMQYRESMDRFGNDRPDTRF 301

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQP 354
            + + ++T+   ++ F+VFS +       +  AI AKG G  +R   +++ + A   G  
Sbjct: 302 GMELVDITDIVKNTGFKVFSSVAQSGGVVK--AINAKGAGDWSRGDVEKLADIAAENGAK 359

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           G+A+I +  D         P+ K  +     A++  +D++ GD   F A       +  +
Sbjct: 360 GMAWIAFTTDG----KEKSPIIKFFSDEEFAALKEAMDVEPGDLLLFAADTYEVASAVLS 415

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R H+A  L  +     +  W+++FP ++++E+EKK    H+PFT           +D 
Sbjct: 416 ALRLHMADALN-VPREGHQLLWVVNFPMFKYDEDEKKYAAEHHPFTHVLDEDVDKIESDP 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L+  ++ YDLV +GFE+  G IR H ++         G++ E +E +FG L  A + G P
Sbjct: 475 LACGSYSYDLVMDGFEVGGGTIRIHNADEQRAVLRTCGLTDEEIEEKFGHLIHALELGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           PHGGIA G+DR+VMLL G  ++R+V  FP + +  D + G+PS V+  QL+E+ LR +
Sbjct: 535 PHGGIALGLDRLVMLLGGKASIRDVIAFPKTSSASDPMTGAPSAVTGRQLKEVNLRTL 592


>gi|296272666|ref|YP_003655297.1| aspartyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096840|gb|ADG92790.1| aspartyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 583

 Score =  573 bits (1478), Expect = e-161,   Method: Composition-based stats.
 Identities = 229/596 (38%), Positives = 336/596 (56%), Gaps = 19/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH C ++  S +G  V ++GWV+  R HGGIIF+D+RD  G+ Q+VA+P       E A
Sbjct: 2   RTHYCTEVTESLIGQEVTVAGWVNSRRDHGGIIFIDLRDKGGLVQLVADPADCKDALETA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR E+VL   G V +R     N N++TG+IE+    + I + ++ +P    G+ +  E
Sbjct: 62  EKVRDEFVLIATGKVRARGEGLENPNLVTGKIEIVLSNLIIENRSKPMPFD-LGDEKVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR + RFL+LR    +     R+    ++R  +    F++  TPILT S+PEGARD+LV
Sbjct: 121 EIRLRNRFLELRTKKSYDIFKLRSTANIAIRNCLNEMEFLDVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHPGEFYALPQSPQIFKQLLMVSGFDKYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+D++   E ++   F        V   F R+ Y++A+ +YG+DKPDLR  + + +V
Sbjct: 240 FCTQEDVIKVAEKLIHDTFTACGKD--VPETFPRMTYNEAMEQYGSDKPDLRFDMPLVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +F+ I        + AI    G    ++       ++ R  G  GL Y  
Sbjct: 298 IDIFARSSNEIFASIAKDKAHNRIKAIKCPNGDNIFSKRQMKAFEDYVRKFGAQGLGYFQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K     + E I    +++ GD  FF AG       +    R H+
Sbjct: 358 MKED-----GLKGPLTKFFTEADLEEIVKVTELEVGDVVFFGAGHKKIVWDYMGRFRLHL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A ++ I+  + F+F W++DFP +E   E+ ++   H+PFTMP+     L  ++L  I++ 
Sbjct: 413 ADQMEIVPADTFKFLWVVDFPMFEV--EDGRVKALHHPFTMPK----DLNKDNLEEIESI 466

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H   +  + FS +GIS E    +FG L  A Q G PPHGG A
Sbjct: 467 AYDIVLNGTELGGGSIRIHKENIQKEVFSLMGISDEDAREKFGFLLDALQFGAPPHGGFA 526

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++MLL G  ++R+V  FP +Q    L+  +PS V  EQL+EL LRI +   
Sbjct: 527 LGLDRMIMLLAGTDSIRDVIAFPKTQRAQCLMTNAPSPVDEEQLKELSLRIRKQAN 582


>gi|332638291|ref|ZP_08417154.1| aspartyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 601

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 213/592 (35%), Positives = 329/592 (55%), Gaps = 12/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             RT+  G +  + +   V L GWV + R  GG+IF+D+RD  GI Q+  + +  +    
Sbjct: 1   MKRTNYAGLIDEAYLDQTVTLQGWVQKRRDLGGLIFVDLRDREGIVQLAFSEEINADALA 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +RSE+V+ I+G+V SR+   +N ++ +G+IE+   K  ILS A+  P  +  +   
Sbjct: 61  VAEKMRSEFVIEIEGVVRSRAEGAVNDHLKSGKIEVQVAKATILSEAKTTPFYIEDDINV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + KN+  R++I  +    + A  FI+  TP L  S+PEGARD+
Sbjct: 121 SDELRLKYRYLDLRRPEMQKNLRIRSKITAATHEFLDANGFIDIETPYLAKSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  GSFYALPQ+PQ +KQLLM +GFDRY+Q+A  FRDED R DR P EF QLD+E
Sbjct: 181 LVPSRVYPGSFYALPQSPQLFKQLLMGAGFDRYYQVARAFRDEDLRGDRQP-EFTQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ QD+I+  +   +  + ++  +    +     + Y DA+ R+GTDKPD+R  + + 
Sbjct: 240 TSFMTQDEIMALVNEWVAAIMKKTVDVELNTTEIPVLDYADAMARFGTDKPDMRFGMELQ 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++    SEF VF+  +      +   +P      +R   D+M ++    G  GLA++ 
Sbjct: 300 DLSDLMADSEFGVFANAVKNGGQVKAIVVPGGADNYSRKDIDKMAQYIERFGAKGLAWLK 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                  +    GP+AK L     +A+  + + Q GD   F A       +     R   
Sbjct: 360 IT-----DEGITGPIAKFLT-AKGDALLAQTEAQAGDLILFAADSANVVSATLDALRRMT 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIK 478
           A+E+G+I+   + F W++++P +E   EE +   AH+PFTMP      L           
Sbjct: 414 AKEMGLIDDTKWAFAWVVNWPLFEHQAEEDRWIAAHHPFTMPNEEDLPLLETTDGAHQAH 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+ SG IR H  ++  +  S +G +KE   + FG L    + G PP GG
Sbjct: 474 AQSYDLVLNGYELGSGSIRIHRMDIQEKMLSALGFTKEAAHDAFGFLLEGMEYGFPPMGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL-RELGL 589
           IA G+DR+ MLL G  N+REV  FP +    + +  +P+ V+  Q+  +LGL
Sbjct: 534 IALGLDRLAMLLAGRDNIREVIAFPKNSKATEPMTEAPTPVAQAQIVDDLGL 585


>gi|317122077|ref|YP_004102080.1| aspartyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315592057|gb|ADU51353.1| aspartyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 615

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 232/592 (39%), Positives = 327/592 (55%), Gaps = 8/592 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R   CG++    VG  + ++GWVHRVR  GG+ F++IRD  G  Q+V N   A   +   
Sbjct: 28  RDLGCGEVRPEHVGRTLAVAGWVHRVRDLGGMKFVEIRDRTGRLQLVINRAEAPEAVVRA 87

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++R+E+V+   G V  R+ E +N  + TG++EL  +++ ILS ++  P  +    +  
Sbjct: 88  AENLRAEFVVAARGPVRRRAPEAVNPRLATGEVELVPEQLWILSTSKTPPFELDAAADVD 147

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R +YR+LDLRR  + +N+  R R    +R       F+E  TP+LT S+PEGARD+L
Sbjct: 148 EALRLRYRYLDLRRPEMFRNLWLRHRAYQVVRRYFDRHGFLEVETPMLTRSTPEGARDYL 207

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM +G +RYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 208 VPSRLYPGRFYALPQSPQLFKQLLMVAGLERYFQIVRCFRDEDLRADRQP-EFTQIDVEM 266

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ DD+L   E ++  ++ E      VS    R+ Y +A+ RYG+DKPDLR    + +
Sbjct: 267 SFVDVDDVLAVAEGMMAELWRELLGVE-VSLPLPRLTYAEAMARYGSDKPDLRYEPAIAD 325

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V++ F  + FR F   L           P  G   +R   D ++E AR+ G       + 
Sbjct: 326 VSDVFSATGFRAFRAALEAGGAVRALRAP-GGAALSRKELDGLDEAARAAGAG--GVAWI 382

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E    A  GPV K        A+  RL +Q GD     A  P +        R  +A
Sbjct: 383 AVPEPDPAAWRGPVVKFFTPEERAALAGRLGLQAGDLVLLAADQPERASVVLGKLRLQLA 442

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG      +   WI+DFP  EW+EEE +    H+PFT P+         D   ++A  
Sbjct: 443 ERLGWPRVREWALAWIVDFPLLEWDEEEGRYVARHHPFTSPRDEDLDRLETDPAGVRAKA 502

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+EI  G IR H  +V  + F  +G+  E    RFG L  AF+ G PPHGGIA 
Sbjct: 503 YDLVLNGYEIGGGSIRIHRRDVQERVFRAIGLPPEKARERFGFLLEAFEYGPPPHGGIAF 562

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G DRIVML  GA ++R+V  FP +    D L G+P+ V   QL EL LR+  
Sbjct: 563 GFDRIVMLAAGASSIRDVIAFPKTARAVDPLTGAPAEVDPGQLEELQLRVQP 614


>gi|315636219|ref|ZP_07891473.1| aspartate--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479580|gb|EFU70259.1| aspartate--tRNA ligase [Arcobacter butzleri JV22]
          Length = 591

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 227/594 (38%), Positives = 337/594 (56%), Gaps = 16/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH C D+    +G  V ++GWV+  R HGGIIF+D+RD  G+ Q+VA+P        IA
Sbjct: 4   RTHYCTDVTEKLIGQTVTVAGWVNSRRDHGGIIFIDLRDKSGLVQLVADPQDCKDALAIA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VR E+VL   G V +R     N N+ITG+IE+  + + I + +  +P  +  E+   +
Sbjct: 64  ETVRDEFVLIATGKVRARGEGLENPNLITGKIEIILENLVIENRSRPMPFDINDEK-VND 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            I+ + RFL+LR          R++     R  +    F++  TPILT S+PEGARD+LV
Sbjct: 123 EIKLRNRFLELRSKKSFDIFQLRSKATIQARNTLDELGFLDVETPILTKSTPEGARDYLV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFD+YFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 183 PSRVHAGEFYALPQSPQLFKQLLMVAGFDKYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 241

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+D++   E ++  +F +      V + F R+ Y +A+ +YG+DKPDLR  + + +V
Sbjct: 242 FCNQEDVIKVAEKLIYDIFTKCGKN--VPSTFRRMKYSEAMEKYGSDKPDLRFDMPLVDV 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + FV+S   +F++I        + A+  K G    ++       ++ R  G  GL Y  
Sbjct: 300 IDIFVNSTNEIFAEIAKDKKNNRIKALKCKNGDNIFSKRQMKSFEDYVRKFGAKGLGYFQ 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  + E I    +++ GD  FF AG       +    R  +
Sbjct: 360 MKED-----GLKGPLTKFFSEADLEEIIKVTELEVGDVVFFGAGAKKVVWDYMGRFRLFL 414

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG-NDLLSIKA 479
           A E+ I+  + +EF W++DFP +E   E+ +    H+PFTMP      L    DL  I++
Sbjct: 415 ANEMNIVPKDAYEFLWVVDFPMFEV--EDGRTKALHHPFTMPNVEKYDLDNIEDLEEIES 472

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H  E+  + F  +GIS+E  + +FG L  A   G P HGG 
Sbjct: 473 IAYDIVLNGTELGGGSIRIHKEEIQSKVFKLMGISQEEAKEKFGFLLDALSYGAPSHGGF 532

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DR++MLL G  ++R+V  FP +Q    LL  +PS V  EQL+EL +RI +
Sbjct: 533 ALGLDRMIMLLAGTDSIRDVIAFPKTQKAQCLLTQAPSAVDEEQLKELSIRIRK 586


>gi|291457466|ref|ZP_06596856.1| aspartate--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291381301|gb|EFE88819.1| aspartate--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 599

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 224/610 (36%), Positives = 338/610 (55%), Gaps = 33/610 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V L+GWV R R HGG+ F+D+RD  G+ QVV        ++A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDATGLVQVVI----YDEDMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFG 116
            +RSE+V+ + G V  R     N ++ TG+IE+ A+ IE+L+ A+ LP            
Sbjct: 62  PLRSEFVIQVTGDVRLRPDGNENTHLATGKIEVVAESIEVLAKADALPFQVSTALENESE 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM++V+Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +T++F ++ FRVF         Y    +   G    R   D   +WAR +G  GL
Sbjct: 299 NPLVELTDYFKNTPFRVFQAP------YVGAVVFKGGAATPRRQFDAWQDWARQRGAKGL 352

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E+G +   GPVAK+L+      +R  +  ++GD+ FF AG            
Sbjct: 353 AYVVF--GENGELK--GPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESSQLLLGAV 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A   G+++   F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 409 RVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H  ++  +    +GI+KE  + +FG L  
Sbjct: 469 DKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGFLLE 528

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH G+A G DR V +L GA ++R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 529 AFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAET 588

Query: 588 GLRIVENPKK 597
           G+    +  +
Sbjct: 589 GVDYDPDADE 598


>gi|23464646|ref|NP_695249.1| aspartyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|46577273|sp|Q8G863|SYD_BIFLO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|23325204|gb|AAN23885.1| aspartyl-tRNA synthetase [Bifidobacterium longum NCC2705]
          Length = 599

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 226/610 (37%), Positives = 338/610 (55%), Gaps = 33/610 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V L+GWV R R HGG+ F+D+RD  G+ QVV        ++A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVI----YDEDMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFG 116
            +RSE+V+ I G V  R     N ++ TG+IE+ A+ IEIL+ ++ LP            
Sbjct: 62  PLRSEFVIQITGEVRLRPDGNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENESE 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQYNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM++V+Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +TE+F ++ FRVF         Y    +   G    R   D   +WAR +G  GL
Sbjct: 299 NPLVELTEYFKNTPFRVFQAP------YVGAVVFKGGAATPRRQFDAWQDWARQRGAKGL 352

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E+G +   GPVAK+L+      +R  +  ++GD+ FF AG            
Sbjct: 353 AYVVF--GENGELK--GPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESAQLLLGAV 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A   G+++   F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 409 RVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H  ++  +    +GI+KE  + +FG L  
Sbjct: 469 DKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGFLLE 528

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH G+A G DR V +L GA ++R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 529 AFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAET 588

Query: 588 GLRIVENPKK 597
           G+    +  +
Sbjct: 589 GVDYDPDADE 598


>gi|189438881|ref|YP_001953962.1| aspartyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|213691602|ref|YP_002322188.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|227546745|ref|ZP_03976794.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|239620721|ref|ZP_04663752.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|322691621|ref|YP_004221191.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|238692033|sp|B3DPM0|SYD_BIFLD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781717|sp|B7GPT0|SYD_BIFLI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189427316|gb|ACD97464.1| Aspartyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|213523063|gb|ACJ51810.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|227212707|gb|EEI80588.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|239516297|gb|EEQ56164.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|320456477|dbj|BAJ67099.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320457690|dbj|BAJ68311.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 599

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 226/610 (37%), Positives = 338/610 (55%), Gaps = 33/610 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V L+GWV R R HGG+ F+D+RD  G+ QVV        ++A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVI----YDEDMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFG 116
            +RSE+V+ I G V  R     N ++ TG+IE+ A+ IEIL+ ++ LP            
Sbjct: 62  PLRSEFVIQITGEVRLRPDGNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENESE 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM++V+Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +TE+F ++ FRVF         Y    +   G    R   D   +WAR +G  GL
Sbjct: 299 NPLVELTEYFKNTPFRVFQAP------YVGAVVFKGGAATPRRQFDAWQDWARQRGAKGL 352

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E+G +   GPVAK+L+      +R  +  ++GD+ FF AG            
Sbjct: 353 AYVVF--GENGELK--GPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESAQLLLGAV 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A   G+++   F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 409 RVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H  ++  +    +GI+KE  + +FG L  
Sbjct: 469 DKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGFLLE 528

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH G+A G DR V +L GA ++R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 529 AFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAET 588

Query: 588 GLRIVENPKK 597
           G+    +  +
Sbjct: 589 GVDYDPDADE 598


>gi|312132334|ref|YP_003999673.1| asps [Bifidobacterium longum subsp. longum BBMN68]
 gi|322689660|ref|YP_004209394.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
 gi|311773817|gb|ADQ03305.1| AspS [Bifidobacterium longum subsp. longum BBMN68]
 gi|320460996|dbj|BAJ71616.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
          Length = 599

 Score =  573 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 226/610 (37%), Positives = 338/610 (55%), Gaps = 33/610 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V L+GWV R R HGG+ F+D+RD  G+ QVV        ++A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVI----YDEDMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFG 116
            +RSE+V+ I G V  R     N ++ TG+IE+ A+ IEIL+ ++ LP            
Sbjct: 62  PLRSEFVIQITGEVRLRPDGNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENESE 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM++V+Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +TE+F ++ FRVF         Y    +   G    R   D   +WAR +G  GL
Sbjct: 299 NPLVELTEYFKNTPFRVFQAP------YVGAVVFKGGAATPRRQFDAWQDWARQRGAKGL 352

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E+G +   GPVAK+L+      +R  +  ++GD+ FF AG            
Sbjct: 353 AYVVF--GENGELK--GPVAKNLSDEERAGLREAVGAEEGDAVFFAAGSRESAQLLLGAV 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A   G+++   F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 409 RVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H  ++  +    +GI+KE  + +FG L  
Sbjct: 469 DKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGFLLE 528

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH G+A G DR V +L GA ++R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 529 AFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAET 588

Query: 588 GLRIVENPKK 597
           G+    +  +
Sbjct: 589 GVDYDPDADE 598


>gi|168001325|ref|XP_001753365.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695244|gb|EDQ81588.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 683

 Score =  573 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 236/598 (39%), Positives = 335/598 (56%), Gaps = 20/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSA--CFEI 61
           R+H CG L   DVG+ VR+ GWV   R HG I F+++RDH GI QV   +PD+   C E 
Sbjct: 88  RSHECGKLTEKDVGTRVRVCGWVASQRSHGAIAFVNLRDHSGIVQVRECDPDNFPDCHET 147

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIE-LSAQKIEILSV---AEEL-PLPVFG 116
           A+ VR E+V+ ++G V  R  E  NA + TG IE + A+ +++L+    A          
Sbjct: 148 AQHVRVEYVVAVEGTVQLRPKEVANARMATGSIEVIIAESLQVLNKVGLALPFLVTLADD 207

Query: 117 EREYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSP 174
            +E P E +R +YR LDLRR  ++ N+  R  II  MR  +    +FIE  TPILT S+P
Sbjct: 208 NKEMPSEEVRLRYRHLDLRRAQMNTNLRIRHNIIKLMRRHLEDVHDFIEIETPILTKSTP 267

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EGARD+LVPSRV  G FYALPQ+PQ +KQ+LM SGF+RY+Q+A CFRDED R+DR P EF
Sbjct: 268 EGARDYLVPSRVQPGDFYALPQSPQLFKQMLMVSGFNRYYQLARCFRDEDLRADRQP-EF 326

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            QLD+E+SF   +D+L   E ++R VF++    + + N F R+ Y +A+ RYG+DKPDLR
Sbjct: 327 TQLDLELSFTPLEDMLELNEGLMRHVFKQIIGVD-LPNPFRRVTYAEAMSRYGSDKPDLR 385

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW--ARSQG 352
             + +  V+E F  S F  FS  +      +  +IP      +     + + +  A   G
Sbjct: 386 YGLELVKVSELFAGSSFAPFSSAVEEGGLVKAISIPGGSSKISATRLKKGDVYQQAIKSG 445

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
             GL Y+  ++   G + G   +   L+    + +        GD   F AG        
Sbjct: 446 AKGLPYV--KVLAGGELEGPPALVGSLSPEKKQELVSLCASNAGDLIVFAAGPDSSVHRT 503

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               R ++A  L I++ +     W+ DFP +EWNE+E++++  H+PFT P          
Sbjct: 504 LDALRTYLADNLDIVDKSAHAILWVTDFPMFEWNEDEQRLEALHHPFTAPHPDDMG---- 559

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DL + +A  YDLV NG EI  G +R +   V  +  S +G++ E  E +FG L  A   G
Sbjct: 560 DLKNARALAYDLVYNGVEIGGGSLRIYKRSVQEKVLSAIGLTPEEAEEKFGFLLEALDLG 619

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            PPHGGIA G+DR+VMLL G  ++R+V  FP S     LL  +PS+V   QL +L LR
Sbjct: 620 APPHGGIAYGLDRLVMLLAGETSIRDVIAFPKSTTARCLLTNAPSSVDSSQLSQLSLR 677


>gi|254482561|ref|ZP_05095800.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214037252|gb|EEB77920.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 574

 Score =  573 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 215/578 (37%), Positives = 321/578 (55%), Gaps = 7/578 (1%)

Query: 26  WVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           WV R R HGG+IFLD+RD  GI QVV +PD    FE A  VRSE+VL I G V +R   T
Sbjct: 1   WVDRRRDHGGVIFLDMRDREGIVQVVFDPDTEEHFERADRVRSEYVLKITGRVRARGEGT 60

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
           +N  + TG+IE+  +++EIL+ A   P  +       E +R KYR++DLRR  + + ++ 
Sbjct: 61  VNPAMATGEIEVLGKELEILNTAATPPFQLDEHTSVGEEVRLKYRYMDLRRHEMQERLIT 120

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           R++I +++R  +  E F++  TPILT ++PEGARD+LVPSR + G F+ALPQ+PQ +KQL
Sbjct: 121 RSKITSAVRTFLDREGFLDIETPILTRATPEGARDYLVPSRTHPGQFFALPQSPQLFKQL 180

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           LM SGFDRY+Q+A CFRDED R+DR P EF Q+D+E SF+E+++I+   E ++R +F+  
Sbjct: 181 LMVSGFDRYYQVAKCFRDEDLRADRQP-EFTQIDIETSFLEEEEIMGITERMVRELFQST 239

Query: 265 SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
            +       F  + Y +A+ RYG+DKPDLR  + + +V +     +F+VF        G 
Sbjct: 240 LDVELPE--FPHMPYSEAMERYGSDKPDLRIDMELVSVDDLMQQVDFKVFRGPADDVAGR 297

Query: 325 EVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
                   G   +R   D   ++    G  GLA+I      +G      P+ K +     
Sbjct: 298 VAALKVTGGATISRKEIDDYTKYVSIFGARGLAWIKVNELATGVEGLQSPILKFMPDEVV 357

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYE 444
             +  RLD  DGD  FF A             R  +A +  +I    +   W++DFP +E
Sbjct: 358 MQMMERLDAADGDIIFFGADKTRVVNESLGALRIKVAADQNMIREG-WAPLWVVDFPMFE 416

Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
            +     +   H+PFT P   +E L         +  YD+V NG E+  G IR H  ++ 
Sbjct: 417 ED-GNGGLTPLHHPFTAPSCSVEELVDK-PAEALSRAYDMVLNGCELGGGSIRIHQRDMQ 474

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              F  + IS E  + +FG L +A Q G PPHGG+A G+DRIVML+    ++R+V  FP 
Sbjct: 475 EAVFRILEISDEEADEKFGFLLQALQYGAPPHGGLAFGLDRIVMLMTDCASIRDVIAFPK 534

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           +Q    ++  +P  V+  QLREL +R+ ++ ++     
Sbjct: 535 TQTAHCVMTDAPGDVNAAQLRELNIRLRQSREEAKAAE 572


>gi|281492564|ref|YP_003354544.1| aspartyl-tRNa synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376228|gb|ADA65719.1| Aspartyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 590

 Score =  573 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 221/604 (36%), Positives = 342/604 (56%), Gaps = 24/604 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RT+  G++    +   + + GWV + R  GG+IF+D+RD  GI Q+V NP++A  ++A
Sbjct: 1   MKRTNYAGNITEEYLNQTITVKGWVAKRRNLGGLIFIDLRDREGIVQIVVNPETAAADVA 60

Query: 63  KSV---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           ++    R+E+VL + G V+ R+++  N  I TG IE+ A  IEILS ++  P  +  + E
Sbjct: 61  EAADKARNEFVLEVTGKVVERASK--NDKIKTGGIEIEATAIEILSTSKTTPFEIKDDVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R KYR+LDLRR  + KNI  R     S+R  +    FI+  TP L  S+PEGARD
Sbjct: 119 VLDDTRLKYRYLDLRRPEMLKNITMRHATTRSIREYLDGAGFIDVETPFLNKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +G DRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGEFYALPQSPQLMKQLLMTAGLDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ +++I +  E ++  V ++    + V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLSEEEIQDLTEELIAKVMKDVKGID-VTLPFPRMKYDDAMNFYGSDKPDTRFELLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +++      +F+VF +        +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 TDLSALAKTIDFKVFQEA----EVVKAIVVKDAADKYSRKSIDKLTEQAKQNGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +   E       G V+K L   +T++    L + D D   F+A       S     R  
Sbjct: 353 KFEKSE-----FAGGVSKFL-AESTDSFVNELKLTDNDLVLFVADSLDVANSALGALRLT 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK-------GN 472
           I ++ G+I+   F F W++D+P +EW++EE++   AH+PFT+P    ++          +
Sbjct: 407 IGKQQGLIDFRQFNFLWVIDWPMFEWSDEEERYMSAHHPFTLPTKETQAFLSADGHSKDS 466

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DL  ++A  YD+V NG+EI  G +R +  ++  +  S +G   E    +FG L  A   G
Sbjct: 467 DLKKVRAHAYDIVLNGYEIGGGSLRINTRQLQEEMLSALGFKLEDANEQFGFLLEALDYG 526

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG+A G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL +++ 
Sbjct: 527 FPPHGGLALGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSIVAEKQLEELSIKLA 586

Query: 593 ENPK 596
              +
Sbjct: 587 NKDQ 590


>gi|157165623|ref|YP_001467181.1| aspartyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|166225332|sp|A7ZEH3|SYD_CAMC1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|112801414|gb|EAT98758.1| aspartyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 585

 Score =  573 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 241/598 (40%), Positives = 340/598 (56%), Gaps = 18/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           R+H C DL  +D+G  V L GW +  R HGG++F+D+RD  G+ Q+V +P       ++A
Sbjct: 2   RSHYCTDLSKADIGKEVILCGWANTYRDHGGVVFIDLRDVSGLIQLVCDPADSKEAHDVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL   G V +R     N  + TG+IE+   ++ I + +E LP  + G+    E
Sbjct: 62  AKVRDEYVLKAKGKVRARGEGLTNPKLKTGEIEVIVSELIIENPSEPLPF-MIGDESVNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYRFLDLR + L      R+R   + R  +    FIE  TP+LT ++PEGARD+LV
Sbjct: 121 DIRLKYRFLDLRSERLQNIFKMRSRAAIAARNSLDKMGFIEFETPVLTRATPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G FYALPQ+PQ +KQLLM SGFD+YFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVYPGQFYALPQSPQLFKQLLMCSGFDKYFQIAKCFRDEDLRADRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQ+DI+N  E +L+ +F+     + +   F R+ Y +A   YG+DKPDLR  + M +V
Sbjct: 240 FVEQEDIINMAETMLKDIFKACG--HDIKTPFRRMSYKEATETYGSDKPDLRYDLKMIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F  S   +FS I        + A+    G    ++   +R  E+ R  G  GL Y  
Sbjct: 298 IDIFERSSNEIFSSIAKDKKKNRIKALKVPNGDNIFSKREMNRFEEFVRKFGAQGLGYFQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K     + + I  R +++ GD  FF AG       +    R  +
Sbjct: 358 MKED-----GLKGPLCKFFEQSDLDEIVSRCELKVGDVVFFGAGKKKIVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++GII+ +  EF W++DFP +E N++       H+PFTMP+   E     DL  I + 
Sbjct: 413 AEQMGIIDQDRLEFLWVLDFPMFEQNDD-GSYSAMHHPFTMPKNIDE----PDLEDILSI 467

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +D+V NGFE+  G IR H +++  + F  +GI +     +FG L  A   G PPHGGIA
Sbjct: 468 AHDVVLNGFELGGGSIRIHKNDIQQKVFKLLGIDEAEQREKFGFLLDALTFGAPPHGGIA 527

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
            G DR+ ML+  A ++R+V  FP +Q     L  +PS  S EQLRELGLRI E  +K 
Sbjct: 528 IGFDRLNMLVNKASSIRDVIAFPKTQRAQCPLTKAPSYASNEQLRELGLRIREKEQKA 585


>gi|307721114|ref|YP_003892254.1| aspartate--tRNA(Asn) ligase [Sulfurimonas autotrophica DSM 16294]
 gi|306979207|gb|ADN09242.1| aspartate--tRNA(Asn) ligase [Sulfurimonas autotrophica DSM 16294]
          Length = 584

 Score =  573 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 228/598 (38%), Positives = 333/598 (55%), Gaps = 21/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH C DL  ++VG  V L+GW +  R HGGIIF+D+RD  G+ Q+  +P+      ++A
Sbjct: 2   RTHYCTDLNETNVGEDVVLTGWANNYRDHGGIIFIDLRDKTGLIQLTCDPEDSKEAHKVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL   G V  R     N  + TG IE+    + I + +  +P  V G++   E
Sbjct: 62  NDVRDEYVLIAKGKVRLRGEGLTNPRLKTGAIEIVVTDLVIENKSAPVPF-VIGDKNVGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+L+LR   + +    R++   + R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 121 ETRLKYRYLELRDPDMFEVFRLRSKAAIAARNILDENGFLEVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHNGEFYALPQSPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+D++   E++L  +F        V   F RI + +A+  YG+DKPDLR  + M +V
Sbjct: 240 FCNQEDVIKVAEDLLVAMFGACG--VDVKPPFNRITHKNAMEWYGSDKPDLRYDLKMVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F   +  +F+ I        + A+   G     ++       ++ R  G  GL Y  
Sbjct: 298 IDIFERCDNEIFTNIAKKPHVNRIKALKVPGADLVFSKREMKSFEDYVRKFGAHGLGYFQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   I  R +++ GD  FF AGD      +    RN I
Sbjct: 358 MKED-----GLKGPLTKFFSEEDIALIIERTELEVGDVVFFGAGDKKTVWDYMGRFRNFI 412

Query: 421 AQ--ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           A+  ++ +I+ N +EF W++DFP +E   E+ ++   H+PFTMP+   +     D+  I+
Sbjct: 413 AEHEKMNLIDENAYEFVWVVDFPMFEV--EDGRVKALHHPFTMPKDTDKD----DVEEIE 466

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H  E+  + F  +GI +E  + +FG L  A + G PPHGG
Sbjct: 467 SIAYDIVLNGTELGGGSIRIHKEEIQEEVFKLLGIEEEEAQEKFGFLLDALKFGAPPHGG 526

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            A G DR++MLL    ++R+V  FP +Q    LL  +PS V   QLR+L +R+ E  K
Sbjct: 527 FALGFDRLIMLLTKKSSIRDVIAFPKTQKASCLLTKAPSPVDNTQLRDLHIRLREQVK 584


>gi|119025594|ref|YP_909439.1| aspartyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|154487055|ref|ZP_02028462.1| hypothetical protein BIFADO_00893 [Bifidobacterium adolescentis
           L2-32]
 gi|118765178|dbj|BAF39357.1| aspartyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|154084918|gb|EDN83963.1| hypothetical protein BIFADO_00893 [Bifidobacterium adolescentis
           L2-32]
          Length = 599

 Score =  573 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 222/610 (36%), Positives = 338/610 (55%), Gaps = 33/610 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++    VG  V L+GWV R R HGG+ F+D+RD+ G+ QVV        E+A+
Sbjct: 6   YRTHHATEVTEQLVGQKVTLAGWVDRRRDHGGVAFIDLRDNTGLVQVVI----YDEEMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFG 116
            +RSE+V+ + G V  R     N ++ TG+IE+ A+ IE+L+ ++ LP            
Sbjct: 62  PLRSEFVIQVVGEVRLRPDGNENEHLATGKIEVVAESIEVLAKSDALPFQVSTALENESE 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR ++ +N+  R ++  + R  +    F E  TP +  S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQRNLKLRAQMSKAARHALEEMGFEEIETPTMIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM+FV+Q+D++   E V+  +++  S G  +     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYDIKLPIQRITWQDAMDKYGSDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +T++F ++ FRVF         Y    +   G    R   D   +WA+ +G  GL
Sbjct: 299 NPLIELTDYFKNTPFRVFQAP------YVGAVLFKGGAATPRRQFDAWQDWAKQRGAKGL 352

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E+G +   GPVAK+L+      ++  +  +DGD+ FF AG            
Sbjct: 353 AYVVFA--ENGELK--GPVAKNLSEEERNGLKEAVGAEDGDAVFFAAGRRTSSQELLGAV 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A+  G++  + F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 409 RVELARRAGLLKPDDFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H  ++  +    +GI+ E   ++FG L  
Sbjct: 469 DKFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGITPEEAADKFGFLLE 528

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH GIA G DR   +L GA ++R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 529 AFKYGAPPHAGIALGWDRTAAILAGADSIRDVIAFPKAGGGRDPLTGAPAPISAEQRAET 588

Query: 588 GLRIVENPKK 597
           G+    +  +
Sbjct: 589 GVDYDPDEDE 598


>gi|289450177|ref|YP_003475045.1| aspartate--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184724|gb|ADC91149.1| aspartate--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 598

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 222/593 (37%), Positives = 324/593 (54%), Gaps = 12/593 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEI 61
           +R+  C ++  + VG  V L GW H+ R  GG+IF+ +RD  G  Q+  N  S       
Sbjct: 10  HRSCMCAEVTDNQVGEQVTLMGWCHKQRDLGGLIFITLRDRSGEIQICVNESSPEAARTA 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A   RSE+VL + G V  RSA   N  + TG IE+ A +I ILS AE  P  +    +  
Sbjct: 70  AAKTRSEYVLAVIGKVSRRSAP--NPQMKTGNIEILADEIRILSEAETPPFYIEEGMQAK 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +S+R KYR+LDLRR  + + ++ R  I N +        F+E  TP+L  S+PEGARD+L
Sbjct: 128 DSLRLKYRYLDLRRPDMQRTLILRHNITNIIHRYFNEHGFLEIETPMLGRSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV  G F+ALPQ+PQ YKQLLM +G+DRY QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 188 VPSRVFPGHFFALPQSPQLYKQLLMVAGYDRYVQIARCFRDEDLRADRQP-EFTQVDLEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV   D+   +E +L  +F E            R+ Y +A+ R+G+DKPDLR  + ++N
Sbjct: 247 SFVNPIDVQTVVEGLLAEIFAEIKGIKI-DLPLQRMPYAEAMERFGSDKPDLRFAMEINN 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V++     +F VF   L++  G              R   D + E+ ++    GLA++ +
Sbjct: 306 VSDWAAKLDFAVFKNALALPKGRVACIQVPGAASMTRKQIDSLGEFVKTYRASGLAWLAF 365

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                      G   K +  V+   I+ +L ++DGD   F+A             R  +A
Sbjct: 366 ------GAETRGSFLKFVTDVDIAEIKQKLSVKDGDLLLFVADKYQVVQDSLGQLRCEVA 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L +I+ N ++  W+ +FP  E++EEE +    H+PFT P      L  +D  +++A  
Sbjct: 420 KRLNMIDENQYKLLWVTEFPLLEYSEEEHRYTAMHHPFTSPMEEDLPLLTSDPGAVRAKA 479

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NG E+  G IR H  ++  Q F  +G ++E     FG L  AF+ G+ PHGG A 
Sbjct: 480 YDVVLNGTELGGGSIRIHDQDLQKQMFGLLGFTEEQAFANFGFLLEAFRYGVAPHGGCAL 539

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR+VM L G  ++R+V  FP  Q   DL+  +P TVS +QL EL L +  +
Sbjct: 540 GLDRLVMKLSGITDIRDVIAFPKVQTSADLMTMAPGTVSDKQLAELKLNLQPD 592


>gi|225352759|ref|ZP_03743782.1| hypothetical protein BIFPSEUDO_04389 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156366|gb|EEG69935.1| hypothetical protein BIFPSEUDO_04389 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 599

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 221/610 (36%), Positives = 337/610 (55%), Gaps = 33/610 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++    VG  V LSGWV R R HGG+ F+D+RD+ G+ QVV        ++A+
Sbjct: 6   YRTHHATEVTEELVGQKVTLSGWVDRRRDHGGVAFIDLRDNTGLVQVVI----YDEDMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFG 116
            +RSE+V+ + G V  R     N ++ TG+IE+ A+ IE+L+ ++ LP            
Sbjct: 62  PLRSEFVIQVVGEVRLRPDGNENDHLATGKIEVVAENIEVLAKSDALPFQVSTALENESE 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR ++ +N+  R+++  + R  +    F E  TP +  S+PEG
Sbjct: 122 NKLPGEEVRLKYRYLDLRRPSMQRNLKLRSQMSKAARHALEEMGFEEVETPTMIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM+FV+Q+D++   E V+  +++  S G  +     RI + +A+ +YG+DKPDLR  
Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYEIQLPIQRITWQEAMDKYGSDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +T++F ++ FRVF         Y    +   G    R   D   +WA+ +G  GL
Sbjct: 299 NPLIELTDYFKNTPFRVFQAP------YVGAVLFKGGAATPRRQFDAWQDWAKQRGAKGL 352

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E+G +   GPVAK+L+      ++  +  +DGD+ FF AG            
Sbjct: 353 AYVVFA--ENGELK--GPVAKNLSEEERAGLKEAVGAEDGDAVFFAAGRRTSAQELLGAV 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A   G++  + F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 409 RVELADRAGLLKPDDFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H  ++  +    +GI+ E   ++FG L  
Sbjct: 469 DTFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGITPEEAADKFGFLLE 528

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH GIA G DR   +L GA ++R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 529 AFKYGAPPHAGIALGWDRTAAILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAET 588

Query: 588 GLRIVENPKK 597
           G+       +
Sbjct: 589 GVDYDPEEDE 598


>gi|152993093|ref|YP_001358814.1| aspartyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|166225437|sp|A6QAE8|SYD_SULNB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|151424954|dbj|BAF72457.1| aspartyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 584

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 227/593 (38%), Positives = 344/593 (58%), Gaps = 19/593 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTH C D+    +G  V ++GWV   R HGG+IF+D+RD   + Q+V +P  ++   +IA
Sbjct: 2   RTHYCADVNEQHIGETVTVAGWVASRRDHGGVIFIDLRDKDEVFQLVCDPADNADAHKIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR ++VL   G V +R     N N+ TG++E+    + I + ++ +P  +  E+   E
Sbjct: 62  EEVRDQFVLIATGKVRARGEGLENPNLKTGKVEMVVDSLTIENRSKPMPFELNDEK-VNE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            I+ KYR+L+LR    +     R++   + R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 121 EIKLKYRYLELRTQKAYDTFKLRSKATIATRNALDELGFLEVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHGGEFYALPQSPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +Q+D++   E ++  VF     G  V   F R+ + +A+ +YG+DKPD+R  + M +V
Sbjct: 240 FCDQEDVITVAEKLISDVF--IKCGFDVPTKFNRMTHSEAMEKYGSDKPDMRYDLAMVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F   +  +FS I  +     + A+    G    ++       ++ R  G  GL Y  
Sbjct: 298 IDIFERCDNEIFSGIAKMPKKNRIKALRVPKGDEIFSKRQMKGFEDYVRKFGAQGLGYFQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K     + +AI  R  ++ GD+ FF AG+      +    R ++
Sbjct: 358 MKED-----GLKGPLTKFFTEDDIQAIIDRCGLEVGDAVFFGAGEKKLVWDYMGRFRIYL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ + II  + FEF W+MDFP +E   E+ K+   H+PFT P+    SL  ND+  I++ 
Sbjct: 413 AETMDIIPEDTFEFLWVMDFPMFEV--EDGKVKALHHPFTQPK----SLDFNDIEEIESI 466

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  +V  + F  +GIS+E  +++FG L  A + G PPHGG A
Sbjct: 467 AYDVVLNGTELGGGSIRIHKEDVQEEVFKLLGISEEEAQSKFGFLLDALKFGAPPHGGFA 526

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR++M++ GA ++R+V  FP +Q    LL  +PS V  EQL+EL +R+ +
Sbjct: 527 LGLDRMIMIMTGASSIRDVIAFPKTQKAQCLLTQAPSEVDNEQLKELSIRVRQ 579


>gi|295112123|emb|CBL28873.1| aspartyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 608

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 234/594 (39%), Positives = 328/594 (55%), Gaps = 11/594 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RT  CGD    D G  VR +GWV R R  GGIIF+++ DH G  QVV NP+       A 
Sbjct: 21  RTKLCGDFSREDAGREVRANGWVRRRRDLGGIIFIELWDHTGSVQVVFNPEAGDVHGAAG 80

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPE 122
            +RSE+ + + G +  R   T N  + TG +E+ AQ + ILS A  +P  V     +  E
Sbjct: 81  GLRSEYCVAVRGKLRIRPEGTENPGLKTGAVEIVAQDLLILSKASPIPFEVGEATDDVDE 140

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R  YR+LDLRR+ +  N+  R+RI    R  +  + F+E  TPILT ++PEGARD+LV
Sbjct: 141 NLRLTYRYLDLRRERMQNNLRTRSRINAFTRRYLEGQGFVELETPILTKATPEGARDYLV 200

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ +KQ+LM SGFDRY+QIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 201 PSRVTPGTFYALPQSPQLFKQILMVSGFDRYYQIARCFRDEDLRADRQP-EFTQVDIEMS 259

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           +V +DD++  +E  ++G+F+E    + V   F R+ Y DA+ RYG+DKPDLR  + + +V
Sbjct: 260 YVVEDDVMELIEGYMKGLFKEVLGVD-VPTPFGRMLYWDAMDRYGSDKPDLRVTLELCDV 318

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
              F  + F  F ++L          +P  G   +R     + + AR  G  GLA    +
Sbjct: 319 ASVFAKASFEPFKQVLDGGGVVRALPLP-GGAALSRKELMDLEDRARKFGASGLAAFQMK 377

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCF-FIAGDPLKFCSFAADARNHIA 421
                     GP+ K L     E +    +++DGD+ F        + C+     R  + 
Sbjct: 378 EGA-----LKGPLVKFLTEGELEELCRIANLKDGDALFVLADASRARACTILGVLRLDLG 432

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +  G +N   + F W+  FP +EW++EEK+    H+PFT P      L   D     A  
Sbjct: 433 RSRGFMNEKEWRFLWVTKFPLFEWSDEEKRWVAMHHPFTSPVLEEGDLMERDPSKALARA 492

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD V NG E+  G IR H  EV  + F  +GIS E  + RFG    A   G PPHGGIA 
Sbjct: 493 YDCVLNGNEVGGGSIRIHDPEVQARLFKCLGISPEEAKRRFGFFLNALSYGTPPHGGIAL 552

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR+VMLL G +++R+V  FP +Q    LL  +P  V   +L EL + +V   
Sbjct: 553 GVDRLVMLLCGGQSIRDVMTFPKTQRAQCLLSQAPDVVEQSRLDELRIAVVPPE 606


>gi|284929420|ref|YP_003421942.1| aspartyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809864|gb|ADB95561.1| aspartyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 587

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 225/588 (38%), Positives = 348/588 (59%), Gaps = 17/588 (2%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIAKSVRSEWVLCI 73
           D+G+ V L GWV R R HGG+IF+D+RDH GI Q+V++P  +S+ +E A+ +R+E+V+ I
Sbjct: 2   DLGTNVTLFGWVDRRRDHGGVIFIDLRDHTGIIQIVSDPKHNSSSYETAERLRNEYVIKI 61

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEIL---SVAEELPLPVFGEREYPESIRFKYRF 130
            G V  R ++++N+ + TG+IE+ A  IEIL   +      +    E    E  R +YR+
Sbjct: 62  IGKVSCRPSDSLNSKMKTGEIEIYADSIEILSVVNKKLPFSISGSEEELIKEETRLRYRY 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDLRR+ +  N+  R ++I ++R  +   +NFIE  TPILT S+PEGARD+LVPSRVN G
Sbjct: 122 LDLRREKMLSNLQLRHKVIKTIRHYLEDYQNFIEVETPILTRSTPEGARDYLVPSRVNFG 181

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            +YALPQ+PQ +KQLLM SGFDRY+Q+A CFRDED R+DR P EF QLDMEMSF+ +D+I
Sbjct: 182 QWYALPQSPQLFKQLLMVSGFDRYYQVARCFRDEDLRADRQP-EFTQLDMEMSFMSEDEI 240

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           L+  E ++  +F+   N   +S  F R+ Y   +  YGTD PD R  + + +V++   +S
Sbjct: 241 LDLNEGLICHIFKTIKNVE-LSRPFPRLTYQYVMENYGTDCPDTRFDLTLVDVSDILRNS 299

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGLAYIFWRLDES 366
           +F+VFS+ +  +   +V  IP      +         + + A   G  G+ YI  R+ E 
Sbjct: 300 KFKVFSEAIKNSGSVKVLPIPEGNSAISNVRIKSGGDLFQEAVESGSKGIVYI--RVKED 357

Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426
             +  +G +  +L     + +  +   + G      AGD        +  R  I +++ +
Sbjct: 358 SQIETIGAIKDNLTNEQKKDLLEKTGAKPGHLLLISAGDTALVNKSLSRLRLIIGKQMNL 417

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           I+ N     W+ +FP +EWN +E++ +  H+PFT P         NDL + +A  YDL+ 
Sbjct: 418 IDKNKINLLWVTEFPLFEWNPDEQRFESLHHPFTCPNTSDL----NDLTTARAQAYDLIF 473

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           NG E+  G +R +  ++  + F  +G+S+E + N+F  +  AF+ G PPHGGIA G+DR+
Sbjct: 474 NGIEVGGGSLRIYQKDIQKKVFQTIGLSEEEIHNKFQFILDAFEYGAPPHGGIAYGLDRL 533

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +MLL   +++R+V  FP +Q    LL  SPS+V  +QL+EL +     
Sbjct: 534 IMLLAEEESIRDVIAFPKTQQASCLLTESPSSVDFKQLQELQVTSTYK 581


>gi|330718277|ref|ZP_08312877.1| aspartyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 592

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 220/596 (36%), Positives = 331/596 (55%), Gaps = 11/596 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEI 61
             RT   G +    +   V L+GWV + R  GG+IF+D+RD  GI Q+  N  ++A  ++
Sbjct: 1   MKRTTYAGLVDEQYLDQTVTLTGWVQKRRDFGGLIFVDLRDREGIVQLTFNETNAAALKV 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ + G+V  RS    N NI TG+IE+     EIL+ A+  P  +       
Sbjct: 61  AEEMRSEYVIEVTGVVHLRSEGQENNNIKTGKIEIEVTDAEILASAKTTPFYIEDNVNAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E ++ +YR+LDLRR  + KN+  R++I++S    M   +FI   TPIL  S+PEGARD+L
Sbjct: 121 EELKLQYRYLDLRRPEMQKNLRIRSKIMSSAMHFMTTHDFINIETPILAKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  GSFYALPQ+PQ +KQLLM +GFDRYFQIA  FRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRIFPGSFYALPQSPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQP-EFTQMDVET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+  D+I + +   ++ + +E  + +  + +   + + +++ R+GTDKPDLR    + +
Sbjct: 240 SFMSADEIRHLVNEWVKVMMKEVVDFDLDTQSIPTLTWQESMDRFGTDKPDLRIAYEIQD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++     SEF VF+  +      +  ++P      +R   D+M ++    G  GLA++  
Sbjct: 300 LSATVAQSEFGVFANAVKDGGVVKAISVPGGADHYSRKDIDKMAQYIERFGAKGLAWLKV 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                 +    GP+AK     + + +      Q GD   F AG      +     R   A
Sbjct: 360 T-----SEGVSGPIAKFF-AEDAQQVIDAAGAQVGDLILFGAGRFDVVSATLDYLRRQTA 413

Query: 422 QELGIIN-CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           ++L +++  N + F WI+D+P +E++E+  +   AH+PFTMP            D     
Sbjct: 414 KDLNLVDNTNPWAFAWIVDWPLFEYSEDFDRWISAHHPFTMPNEEDLHYLDEGEDPHKAH 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NGFE+ SG IR H  ++  +    +G SKE     FG L  A + G PP GG
Sbjct: 474 AQSYDLVLNGFELGSGSIRIHRMDIQEKMLKALGFSKEKAHEAFGFLLEAMEYGFPPMGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA G+DR+ MLL G +N+REV  FP +    + +  +PS V  +QL ELGL   E+
Sbjct: 534 IALGLDRLAMLLAGQENIREVIAFPKNSRATEPMTKAPSRVEQKQLLELGLFTSED 589


>gi|157737027|ref|YP_001489710.1| aspartyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166979739|sp|A8ESW7|SYD_ARCB4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157698881|gb|ABV67041.1| aspartyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 589

 Score =  572 bits (1474), Expect = e-161,   Method: Composition-based stats.
 Identities = 226/594 (38%), Positives = 336/594 (56%), Gaps = 16/594 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RTH C D+    +G  V ++GWV+  R HGGIIF+D+RD  G+ Q+VA+P        IA
Sbjct: 2   RTHYCTDVTEKLIGQTVTVAGWVNSRRDHGGIIFIDLRDKSGLVQLVADPQDCKDALAIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++VR E+VL   G V +R     N N+ITG+IE+  + + I + +  +P  +  E+   +
Sbjct: 62  ETVRDEFVLIATGKVRARGEGLENPNLITGKIEIILENLVIENRSRPMPFDINDEK-VND 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            I+ + RFL+LR          R++     R  +    F++  TPILT S+PEGARD+LV
Sbjct: 121 EIKLRNRFLELRSKKSFDIFQLRSKATIQARNTLDELGFLDVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFD+YFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHAGEFYALPQSPQLFKQLLMVAGFDKYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+D++   E ++  +F +      V + F R+ Y +A+ +YG+DKPDLR  + + +V
Sbjct: 240 FCNQEDVIKVAEKLIYDIFTKCGKN--VPSTFRRMKYSEAMEKYGSDKPDLRFDMPLVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F +S   +F++I        + A+  K G    ++       ++ R  G  GL Y  
Sbjct: 298 IDIFANSTNEIFAEIAKDKKNNRIKALKCKNGDNIFSKRQMKSFEDYVRKFGAKGLGYFQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  + E I    +++ GD  FF AG       +    R  +
Sbjct: 358 MKED-----GLKGPLTKFFSEADLEEIIKVTELEVGDVVFFGAGAKKVVWDYMGRFRLFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG-NDLLSIKA 479
           A E+ I+  + +EF W++DFP +E   E+ +    H+PFTMP      L    DL  I++
Sbjct: 413 ANEMNIVPKDAYEFLWVIDFPMFEV--EDGRTKALHHPFTMPNVEKYDLDNIEDLEEIES 470

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H  E+  + F  +GIS+E  + +FG L  A   G P HGG 
Sbjct: 471 IAYDIVLNGTELGGGSIRIHKEEIQSKVFKLMGISQEEAKEKFGFLLDALSYGAPSHGGF 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DR++MLL G  ++R+V  FP +Q    LL  +PS V  EQL+EL +RI +
Sbjct: 531 ALGLDRMIMLLAGTDSIRDVIAFPKTQKAQCLLTQAPSAVDEEQLKELSIRIRK 584


>gi|256826890|ref|YP_003150849.1| aspartyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583033|gb|ACU94167.1| aspartyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 592

 Score =  572 bits (1474), Expect = e-161,   Method: Composition-based stats.
 Identities = 226/598 (37%), Positives = 346/598 (57%), Gaps = 21/598 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH   T +CG+L ++D G+ V L+GWV   R HGG+IF+D+RD  G TQ V +PD    E
Sbjct: 10  MH---TRTCGELRLADEGTEVTLTGWVWHNRDHGGLIFVDLRDRTGYTQCVFDPDCVTEE 66

Query: 61  I---AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
               A+ +  E+V+ + G V +R   ++N  + TG+IE+ A+ +++L+ +   P  +   
Sbjct: 67  EFHAAEHLGREYVIEVTGTVRARGEGSVNPQMATGEIEVLARSLQVLNTSVTPPFAIEDG 126

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            E  E+ R K+R++DLRR  +   +  R  +  +MR  +    FIE  TPIL  S+PEGA
Sbjct: 127 IETDETTRMKWRYMDLRRPEMFNALKLRHTVAQAMRAALNKRGFIEVETPILANSTPEGA 186

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSR N G FYALPQ+PQQ+KQ+LM  G +RY+QIA CFRDED R+DR P EF Q+
Sbjct: 187 RDYLVPSRPNPGRFYALPQSPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQP-EFTQV 245

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL--RICYDDAIRRYGTDKPDLRN 295
           D+EMSFV + D+++ ME    GVF+E      V ++F   R+ + +A+ R+G D+PD+R 
Sbjct: 246 DIEMSFVSESDVMDLME----GVFQEVLEAAGVEHSFPLERMPWKEAMDRFGCDRPDVRF 301

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQP 354
            + + ++T+   +  F+VF+   +     +  AI AKG G  +R   +++ E A + G  
Sbjct: 302 GMELVDLTDIVANCGFKVFAGAAASGNIVK--AINAKGAGDWSRGDIEKLAEVAAANGAQ 359

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           G+A+I +  D         P+ K L       I+  ++++ GD   F A       +  A
Sbjct: 360 GMAWIAYTSDG----KEKSPIIKFLGEEVHNQIKTAMNVEPGDLVLFAADTFAVANAVLA 415

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R H+A  L  I        WI+DFP +++++E KK    H+PFTM           D 
Sbjct: 416 ALRLHMADLL-HIERPGHRLLWIVDFPMFKYDDEAKKYAAEHHPFTMIPQSDWVKIETDP 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L+  ++ YD+V +GFE+  G IR H +E+  +     G++ E +E +FG L  A + G P
Sbjct: 475 LACGSYSYDIVMDGFEMGGGSIRIHDAELQKRVLRRCGVADEDMEVKFGHLIHALELGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           PHGGIA G+DR+VMLL    ++R+V  FP + +  D + G+P  V+  QL+E GLRI+
Sbjct: 535 PHGGIALGLDRLVMLLTDKSSIRDVIAFPKTSSAADPMTGAPGQVTARQLKEAGLRIL 592


>gi|311894852|dbj|BAJ27260.1| putative aspartyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 600

 Score =  572 bits (1474), Expect = e-161,   Method: Composition-based stats.
 Identities = 226/611 (36%), Positives = 330/611 (54%), Gaps = 21/611 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G+ V L+GWV R R HGG+ F+D+RD  G  QVV        E    
Sbjct: 3   RTHDAGTLRAEQAGTTVTLAGWVARRRDHGGVAFIDLRDASGTVQVVVRD----LESVHG 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPE 122
           +RSE+ + + G V  R     N +I TG +E+  + IE+LS A      +  +      E
Sbjct: 59  LRSEYCVKVVGEVRVRPEGNENPDIPTGAVEVVVESIEVLSEAAPLPFQVAEYEPGSVNE 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +YR+LDLRR+   + +  R+++ + +R  M   +F++  TP LT S+PEGARDFLV
Sbjct: 119 EVRLRYRYLDLRREGPARALRLRSKVNHIIRTVMEENDFLDIETPYLTRSTPEGARDFLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P R+  G +YALPQ+PQ +KQLLM +G +RY+QIA CFRDED R+DR P EF QLD+E S
Sbjct: 179 PVRLQPGHWYALPQSPQLFKQLLMVAGMERYYQIARCFRDEDFRADRQP-EFTQLDIEAS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+Q+D+L   E ++  ++++            R+ Y DA+ RYG+DKPD+R    + ++
Sbjct: 238 FVDQEDVLALGEKIVGRIWKDVHGYEIPDPL-PRLAYADAMARYGSDKPDVRFGQELTDL 296

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T +F  +EFRVF         Y    +   G    R   D   +WA+++G  GLAY+   
Sbjct: 297 TAYFQGTEFRVFQAP------YVGAVVMPGGASQPRKQLDAWQDWAKARGARGLAYVLV- 349

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             ++      GPVAK+L+  +   +      + GD+ FF AG           AR  I +
Sbjct: 350 --DAETGELRGPVAKNLSEEHLAGLAAAAGAKPGDAVFFAAGKKTASQELLGAARLEIGR 407

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKK----IDFAHNPFTMPQGGMESLKGNDLLSIK 478
              +I+ + + F W++DFP +E  E++K         H+PFT P     +    D  S  
Sbjct: 408 RCDLIDESQWAFLWVVDFPMFEPIEDDKGEFQGWHAVHHPFTAPTAESLATFDTDPGSAL 467

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG E+  G IR H  +V  +AF  +G+S+E    +FG L  AF  G PPHGG
Sbjct: 468 SNAYDLVLNGSELGGGSIRIHQRDVQKRAFDAIGLSEEEAAAQFGFLLDAFNYGPPPHGG 527

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           IA G+DR+V LL G   +R+V  FP +    D L G+P+T++  Q RE G+      K  
Sbjct: 528 IALGLDRVVTLLGGYDTIRDVIAFPKTSTGGDPLTGAPTTITPAQRREAGVDAQPKAKDG 587

Query: 599 LKISVTTILRN 609
            K  V +   +
Sbjct: 588 AKDGVKSEAES 598


>gi|139438291|ref|ZP_01771844.1| Hypothetical protein COLAER_00833 [Collinsella aerofaciens ATCC
           25986]
 gi|133776488|gb|EBA40308.1| Hypothetical protein COLAER_00833 [Collinsella aerofaciens ATCC
           25986]
          Length = 595

 Score =  572 bits (1474), Expect = e-161,   Method: Composition-based stats.
 Identities = 231/594 (38%), Positives = 343/594 (57%), Gaps = 11/594 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSAC 58
           H   T +CG+L   +VG  V L+GWV R R HGG+IF D+RD  GITQ+  +P   D   
Sbjct: 10  HSMHTRTCGELRRENVGEEVTLTGWVSRRRDHGGLIFCDLRDREGITQLTFDPEHSDGDA 69

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F+IA+++R EW + I G+V SR  ET NA + TG+IE+     E+L+ +   P  +    
Sbjct: 70  FKIAETMRPEWPIKIHGVVRSRGEETTNAKLATGEIEVLTDHAEVLNTSVTPPFQIEDGI 129

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  E  R +YR+LDLRR  +  N+  R+    ++R  +    F+E  TP L  S+PEGAR
Sbjct: 130 ETSEDTRLRYRYLDLRRPEMMANLKLRSDFTFAIREALHNREFMEVETPSLFKSTPEGAR 189

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DF+VPSR+  G+FYALPQ+PQ  KQLLM  G +RY+Q+A CFRDED R+DR P EF Q+D
Sbjct: 190 DFIVPSRIQPGNFYALPQSPQLLKQLLMVGGVERYYQVAKCFRDEDLRADRQP-EFTQVD 248

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q+D+++ +E VL   F        +     R+ Y +A+  YG+DKPD R  + 
Sbjct: 249 IEMSFVDQNDVMSALEEVLADAFGRMG--VEMPTPLRRMDYWEAMDTYGSDKPDTRYGMH 306

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + ++T+ F +S+F+VF+   +              G   RA  D++   A + G  GLA+
Sbjct: 307 LVDLTDIFANSKFKVFATAANEEGSVVKAINAKGAGAWARAKIDKLAGVASTFGAKGLAW 366

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +R D S N     P+ K  +     A+R R+D++ GD   F AG  L         R+
Sbjct: 367 IAFREDGSIN----SPIVKFFSDEEMAALRERMDVEPGDLVMFAAGPRLLSDEILGGMRS 422

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           H+A  L  I     +F W+++FP + W+E+ K     H PFT+P     +    D L+  
Sbjct: 423 HMANALE-IKREGHDFLWVVNFPLFHWDEDRKAYAAEHQPFTLPTETDIAKIEADPLAAG 481

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD V +GFE   GG+R H +E+ +     +G ++E  E++FG L  A + G PP GG
Sbjct: 482 SCTYDFVMDGFEAGGGGMRIHNAEMQMSMLKLLGFTEERAESQFGFLMEALKFGAPPMGG 541

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            A G+DR+ MLL G+ ++R+V  FP + +  DL+ G+PS VS  QL+++ LR++
Sbjct: 542 FALGLDRVCMLLTGSDSIRDVMAFPKTASGSDLMSGAPSAVSGAQLKDVSLRLM 595


>gi|296454587|ref|YP_003661730.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296184018|gb|ADH00900.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 599

 Score =  572 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 225/610 (36%), Positives = 338/610 (55%), Gaps = 33/610 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V L+GWV R R HGG+ F+D+RD  G+ QVV        ++A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVI----YDEDMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFG 116
            +RSE+V+ + G V  R     N ++ TG+IE+ A+ IEIL+ ++ LP            
Sbjct: 62  PLRSEFVIQLTGEVRLRPDGNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENESE 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM++V+Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +TE+F ++ FRVF         Y    +   G    R   D   +WAR +G  GL
Sbjct: 299 NPLVELTEYFKNTPFRVFQAP------YVGAVVFKGGAATPRRQFDAWQDWARQRGAKGL 352

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E+G +   GPVAK+L+      +R  +  ++GD+ FF AG            
Sbjct: 353 AYVVF--GENGELK--GPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESAQLLLGAV 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A   G+++   F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 409 RVELASREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H  ++  +    +GI+KE  + +FG L  
Sbjct: 469 DKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGFLLE 528

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH G+A G DR V +L GA ++R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 529 AFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAET 588

Query: 588 GLRIVENPKK 597
           G+    +  +
Sbjct: 589 GVDYDPDADE 598


>gi|171912679|ref|ZP_02928149.1| aspartyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 601

 Score =  572 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 233/606 (38%), Positives = 343/606 (56%), Gaps = 17/606 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + YRTH C +L ++ VG  V LSGWV+  R  GG+IF+D+RD  G+TQ+V   +      
Sbjct: 4   NTYRTHHCNELRLAHVGETVTLSGWVNSARDQGGVIFVDLRDREGVTQIVFRSEENPEAA 63

Query: 62  A--KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           A    +R E VL I G V+ R   T N  + TG++EL    + +L+ A  +      +  
Sbjct: 64  AASHKLRDEDVLQITGKVVKRLEGTNNDKLATGEVELVVSSLTMLNKA-AVLPFQLDKEL 122

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLRR  + +N+  R R+  + R  + A  F+E  TPIL+ S+PEGARD
Sbjct: 123 SNEDLRLKYRYLDLRRPRMTRNLRTRHRVTKATRDYLDAHGFVEVETPILSKSTPEGARD 182

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVPSR++ G FYALPQAPQQYKQLLM +G +RYFQIA CFRDED R+DR P EF Q+D+
Sbjct: 183 FLVPSRLSPGKFYALPQAPQQYKQLLMVAGLERYFQIAKCFRDEDLRADRQP-EFTQVDI 241

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF  ++DI N +E +L+ +F+   +       F R+ + +A+ RYG DKPD R    +
Sbjct: 242 EMSFPTEEDIYNLVEGLLKDMFKAGRDVEI-PLPFPRMTWKEAMDRYGIDKPDTRFGNEI 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQ--PGL 356
            ++ + F  +EF++F  +L  + G  V AI AKG         +R+NE A   G     L
Sbjct: 301 TDLGDIFTKTEFKIFRGVL--DGGGVVRAINAKGFASVTTGQMNRLNEIAIQAGLPVKTL 358

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I +      N     P+ +        A+  R+ +++GD  FF+AG     C+     
Sbjct: 359 AFIKYE-----NGEYKSPLWRFFTDEEKAALIERMKIEEGDIVFFVAGPWESTCTILGRV 413

Query: 417 RNHIAQELGIIN-CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL- 474
           R  +A+ +G     +   F W++DFP   ++EE+ K    H+PFT P+     L      
Sbjct: 414 RLEVAEMMGTTKGSDALNFLWVVDFPLLAYSEEDAKWCAVHHPFTRPKTEDIPLLEEGKY 473

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++A  YD+V NG E+  G +R H S++  + FS +G+S+E  +  F  +  AFQ G P
Sbjct: 474 SEVRAIAYDVVLNGCELGGGSLRIHESDLQAKMFSVLGVSEEEQKIMFSHILEAFQFGAP 533

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DRI+ML  G  ++REV  FP +    +L+  SPS    +QLRE+ ++    
Sbjct: 534 PHGGLALGLDRIIMLAAGEDSIREVIAFPKNNRGMELMTASPSPADFKQLREIYIQSTWK 593

Query: 595 PKKILK 600
            KK  +
Sbjct: 594 EKKAEE 599


>gi|293333828|ref|NP_001168737.1| hypothetical protein LOC100382529 [Zea mays]
 gi|223972717|gb|ACN30546.1| unknown [Zea mays]
          Length = 676

 Score =  572 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 219/592 (36%), Positives = 334/592 (56%), Gaps = 17/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R   C +LG  D G  VRL GWV   R H G+ F+ +RD  G+ QV   P+    + I  
Sbjct: 86  RDALCSELGAGDAGRRVRLCGWVALRRAHAGLTFVTLRDRSGMVQVTVLPEYPEVYNIVN 145

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFG--ER 118
            +R E V+ ++G++  R  + INA++ TG IE+ A  + +L+    +   P+      + 
Sbjct: 146 KLRVESVVAVEGVIRPRPVDAINADMRTGTIEVVAHHVLVLNSVTRSLPFPVTTSDTVKE 205

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGA 177
           ++PE IR ++R LDLRR  +  N+  R  ++  +R  +     F+E  TP+L+ S+PEGA
Sbjct: 206 KFPEEIRLRFRVLDLRRPQMQSNLRLRHNVVKLIRRYLEDEHEFVEIETPVLSKSTPEGA 265

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV  G+FYALPQ+PQ +KQ+LM SGF++Y+QIA CFRDED R+DR P EF QL
Sbjct: 266 RDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQL 324

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DME++F   +D+L   E+++R VF+   +   + N F R+ Y +A+ RYGTD+PDLR   
Sbjct: 325 DMEVAFTSMEDMLKLNEDLMRHVFQAVGDIK-LPNPFPRLTYAEAMDRYGTDRPDLRFDW 383

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW--ARSQGQPG 355
            + +V++ F+ S F+VF+  L      +   +P      +     +   +  A   G  G
Sbjct: 384 ELKDVSDVFLGSSFKVFADTLESGGVIKALCVPGGATVFSNTDLKKGTVYTEASKAGAKG 443

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L ++  ++ E+G + G+GP+   L     + +   LD + GD   F  G+          
Sbjct: 444 LPFL--KVMENGELEGIGPLLSSLKPEKKDQLMELLDTKTGDLILFALGEQSSANQILGR 501

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  IA +L +I+ +     W+ DFP ++WN +E++ +  H+PFT P          DL 
Sbjct: 502 LRLFIAHKLEVIDTSAHSVLWVTDFPMFQWNSDEQRYEALHHPFTAPNPEDMD----DLP 557

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           S +A  YD++ NG EI  G +R + S+V  + F  +GIS E  E +FG L   F  G PP
Sbjct: 558 SARALAYDMIYNGVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDMGAPP 617

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           HGGIA G+DR+VMLL G  ++R+V  FP +      L  +PS V  +QL++L
Sbjct: 618 HGGIAYGLDRLVMLLAGESSIRDVIAFPKTTTAQCALTKAPSAVEPQQLKDL 669


>gi|313677050|ref|YP_004055046.1| aspartyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312943748|gb|ADR22938.1| aspartyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 581

 Score =  572 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 226/597 (37%), Positives = 336/597 (56%), Gaps = 21/597 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH  RTH CG+L + + G  V LSGWV RVR  GG++++D+RD YGITQ++        +
Sbjct: 1   MH--RTHHCGELRIENKGEKVILSGWVQRVRNKGGLLWIDLRDRYGITQLLCEEGKTNED 58

Query: 61  IAKSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           I K  R    E+VL   G V+ R ++  N  + TG +E+  +++ IL+ A+  P  +  +
Sbjct: 59  ILKVARKVGREFVLQAKGEVLERFSK--NDKMATGDVEIFLEELNILNAAKTPPFTIEDD 116

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +  E +R +YR+LDLRR  + + +  R +++ + R  M  E F+E  TP+L  S+PEGA
Sbjct: 117 TDGGEELRMQYRYLDLRRPAVREKLKLRHQLMQATRRFMDGEGFLEVETPVLIKSTPEGA 176

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RDF+VPSRV++G FYALPQ+PQ +KQLLM SGFD+YFQI  CFRDED R+DR P EF Q+
Sbjct: 177 RDFVVPSRVHEGEFYALPQSPQTFKQLLMVSGFDKYFQIVKCFRDEDLRADRQP-EFTQI 235

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D EMSFVEQ+DILNT E +++ +F+E          F R+ YD A++ YG+DKPD+R  +
Sbjct: 236 DCEMSFVEQEDILNTFEEMVKYLFKEVKGVEIED--FERMTYDQAMKLYGSDKPDIRFGM 293

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPG 355
               + +      F VF +   V                 R   D + E+ +    G  G
Sbjct: 294 PFVELNDQTQGKGFNVFDQAELVVGINV-----PSASEYTRKQLDALTEYVKRPQIGAKG 348

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y+    D     +    V K  +  + +A     + + GD    ++G+         +
Sbjct: 349 LVYVKCNQDG----SFKSSVDKFYSQDDLKAWAEAAEAKAGDLLLVLSGEIDHTRRAMNE 404

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  +  ELG+ + N F+  W++DFP  EW+EE K+    H+PFT P+        +D  
Sbjct: 405 LRLKMGSELGLRDKNVFKPLWVLDFPLLEWDEETKRFHAMHHPFTSPKLEDMEFIESDPG 464

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            I+A  YD+V NG EI  G IR H   +  + F  +G ++E  + +FG L  AF+ G PP
Sbjct: 465 RIRANAYDMVINGVEIGGGSIRIHDKSLQQKMFKALGFTEEEAQKQFGFLMEAFEYGAPP 524

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           HGGIA G DR+  +  G+ ++R+   FP +    D+++ SP+T+S EQL+EL L I 
Sbjct: 525 HGGIAFGFDRLCAMFGGSDSIRDYIAFPKNNAGRDVMIDSPATISPEQLKELHLSIK 581


>gi|270284250|ref|ZP_05965803.2| aspartate--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277405|gb|EFA23259.1| aspartate--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 614

 Score =  571 bits (1472), Expect = e-160,   Method: Composition-based stats.
 Identities = 219/610 (35%), Positives = 341/610 (55%), Gaps = 33/610 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   D+    VG  V+LSGWV R R HGG+ F+D+RD  G+ QVV N +    E+A+
Sbjct: 22  YRTHHATDVTEDLVGQRVKLSGWVDRRRDHGGVAFIDLRDSSGVVQVVINDE----EMAR 77

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-------G 116
            +RSE+V+ ++G V  R     N ++ TG++E+  + +++L+ ++ LP  V         
Sbjct: 78  PLRSEFVVELEGTVRMRPEGNENPHMRTGKVEVEVESLDVLAKSDALPFQVSTVLANETE 137

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR ++ +NI  R+ ++ + R  +    F E  TP +  S+PEG
Sbjct: 138 GKLPGEDVRLKYRYLDLRRPSMARNIKLRSDMMKAARTVLDEMGFTEVETPTMIKSTPEG 197

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM +G +RY+Q A C+RDED R+DR P EF Q
Sbjct: 198 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVAGVERYYQFARCYRDEDFRADRQP-EFTQ 256

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM+FV+Q+D++   E +++ +++  + G+ V     RI + DA+ +YG+DKPDLR  
Sbjct: 257 LDMEMAFVDQEDVMAMTERLIQAIWK--AAGHDVQLPLPRITWQDAMDKYGSDKPDLRFG 314

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +T++F ++ FRVF         Y    +   G    R   D   +WA+ +G  GL
Sbjct: 315 NPLVELTDYFKNTPFRVFQAP------YVGAVLFKGGAATPRRQFDAWQDWAKQRGAKGL 368

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AYI +   E+G +   GPVAK+++      ++  +  +DGD+ FF AG            
Sbjct: 369 AYIVF--GENGEIK--GPVAKNISEEERNGLKAAVGAEDGDAVFFAAGAREASQMLLGAV 424

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A   G++  + F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 425 RVELADRAGLLKPDDFAFTWVVDFPLFKKADDPDDDDVAVGHSKWTSMHHPFTMPSKDWL 484

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H  ++  +    +GI +   +++FG L  
Sbjct: 485 DTFDQDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLEVLGIDEAEAQDKFGFLLE 544

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH GIA G DR   +L G+ ++R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 545 AFKYGAPPHAGIALGWDRTAAILSGSDSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAET 604

Query: 588 GLRIVENPKK 597
           G+       +
Sbjct: 605 GVDYDPEDDE 614


>gi|315617911|gb|EFU98509.1| aspartyl-tRNA synthetase [Escherichia coli 3431]
          Length = 553

 Score =  571 bits (1472), Expect = e-160,   Method: Composition-based stats.
 Identities = 202/557 (36%), Positives = 306/557 (54%), Gaps = 7/557 (1%)

Query: 41  IRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQ 99
           +RD  GI QV  +PD     ++A  +R+E+ + + G V +R  + IN ++ TG+IE+ A 
Sbjct: 1   MRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLAS 60

Query: 100 KIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE 159
            + I++ A+   LP+       E  R KYR+LDLRR  + + +  R +I + +R  M   
Sbjct: 61  SLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDH 118

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
            F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  C
Sbjct: 119 GFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKC 178

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           FRDED R+DR P EF Q+D+E SF+    +   ME ++R ++ E    +    +F  + +
Sbjct: 179 FRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTF 235

Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
            +A RRYG+DKPDLRNP+ + +V +     EF VF+   +   G         G    R 
Sbjct: 236 AEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRK 295

Query: 340 FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC 399
             D    + +  G  GLAYI       G      PVAK LN    E I  R   QDGD  
Sbjct: 296 QIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEDILDRTAAQDGDMI 355

Query: 400 FFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF 459
           FF A +           R  + ++LG+ + + +   W++DFP +E ++ E  +   H+PF
Sbjct: 356 FFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHPF 414

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
           T P+    +       +  A  YD+V NG+E+  G +R H  ++    F  +GI++E   
Sbjct: 415 TSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQR 474

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
            +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+  +PS  
Sbjct: 475 EKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFA 534

Query: 580 SVEQLRELGLRIVENPK 596
           +   L EL +++V+  +
Sbjct: 535 NPTALAELSIQVVKKAE 551


>gi|269959081|ref|YP_003328870.1| aspartyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848912|gb|ACZ49556.1| aspartyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 592

 Score =  571 bits (1472), Expect = e-160,   Method: Composition-based stats.
 Identities = 292/599 (48%), Positives = 391/599 (65%), Gaps = 10/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M+ YRTH C +LGV+ VG+ V LSGWV+R R HGG++F+D+RD YGITQ++ N   +   
Sbjct: 1   MNIYRTHVCNELGVAHVGNEVALSGWVYRKRDHGGLLFVDLRDFYGITQLIFNESENPEL 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F    ++  E V+ + G+V  RS + +NA+I TG +E+    + ++S A  LPL V    
Sbjct: 61  FNRMATIGLESVITVRGIVAERSEDNVNASIETGHVEVKVSTLTVVSEAAPLPLHVPTSF 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
            YPE IR ++RFLDLR D +  +I+ R+ +++ +R  M A  FIE  TPILT+SSPEGAR
Sbjct: 121 SYPEDIRLQHRFLDLRCDKVKNSILLRSMVVSELRRAMEALGFIEVHTPILTSSSPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D++VPSR + G FYALPQAPQ +KQLLM  GFD+YFQIAPCFRDED R+DR PGEFYQLD
Sbjct: 181 DYIVPSRTHAGKFYALPQAPQIFKQLLMVGGFDKYFQIAPCFRDEDSRADRSPGEFYQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTV-SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           MEMSFV Q+D+   +E VL G+F +F+  +      F RI Y D++ RYG+DKPDLRNPI
Sbjct: 241 MEMSFVTQEDVFAAIEPVLYGLFAKFAGADKKVDRQFPRITYRDSMIRYGSDKPDLRNPI 300

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           ++ +VTE F +S FR F   +           P   G   R+F D   E A+  G  GL 
Sbjct: 301 VISDVTEIFRNSGFRTFQAGVEAGEVVRAIPAPNTSGK-PRSFFDDKIERAKEFGARGLG 359

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+ +  D        GP+AK L+      IR    + +GDS FF++    K   FA   R
Sbjct: 360 YVTYEADG----TAKGPIAKFLSEDELARIRSAAGVDNGDSVFFMSDTADKAADFAGKIR 415

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  ELG+I  + F+FCWI+DFP+++   E+ K+DF HNPF+MPQG ME+L+  + L I
Sbjct: 416 ELLGLELGLIEHDTFKFCWIVDFPYFK--CEDGKLDFCHNPFSMPQGEMEALEQQNPLDI 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+QYD+VCNG EI+SG IRNH  +VM +AFS VG  ++ V ++FG L RAF+ G PPHG
Sbjct: 474 IAYQYDIVCNGIEISSGAIRNHRLDVMYKAFSMVGYDEQTVNSKFGALVRAFKFGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+A GIDRIVMLL  A N+REV  FP++Q   DLLMG+PS VS   L+EL + +    K
Sbjct: 534 GLAPGIDRIVMLLADAPNIREVICFPLNQTGEDLLMGAPSEVSPAHLQELSIALNIKRK 592


>gi|113954533|ref|YP_732041.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|113881884|gb|ABI46842.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 622

 Score =  571 bits (1472), Expect = e-160,   Method: Composition-based stats.
 Identities = 210/601 (34%), Positives = 337/601 (56%), Gaps = 16/601 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             R++ CGDL  + +   V+L GWV R R HGG+IF+D+RD  G  Q+  +PD  +  F 
Sbjct: 11  PMRSNGCGDLRDTHIDETVQLCGWVDRRRDHGGVIFIDLRDRSGTVQITVDPDLGADAFA 70

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGE 117
           +A+ +RSE VL + G+V +R  E++N  + TG +E+ A  I +L+  +     P+ V  E
Sbjct: 71  VAEHLRSETVLQVQGMVRARPDESLNDRLATGAVEVLASNIHVLNSVKGTLPFPVSVHDE 130

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R ++RFLDLRR  ++ N+  R + I + R  +  E FIE  TP+LT S+PEGA
Sbjct: 131 ENTREELRLRHRFLDLRRKRMNDNLRLRAQTIQTARRFLEDEGFIEVETPVLTRSTPEGA 190

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+++PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QL
Sbjct: 191 RDYILPSRVCGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQP-EFTQL 249

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF+ Q+ IL   E ++  +++     + +   F R+ + +A+ RYGTD+PD R  +
Sbjct: 250 DMEMSFMGQEQILELNERLIAAIWKTIKGID-LPLPFPRLTWHEAMERYGTDRPDTRYGM 308

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNEWARSQGQPGL 356
            + NV++      F+VFS  +      +  A+       +        + ++ +Q     
Sbjct: 309 ELTNVSDIVKDMGFKVFSGAVKSGGSVKCIAVSGGNDAVSNVRIKPGGDVFSEAQAAGAG 368

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
              F R+ E G +  +G +  +L+    + +  R   + G    F AGD           
Sbjct: 369 GLAFIRVREGGEIDTIGAIKDNLSDEQKQTLLQRTGAEPGTLLLFGAGDTATVNKALDRV 428

Query: 417 RNHIAQELGIINCN----CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
           R ++A+E+G++  +     + F W++DFP +E+N++E +++  H+PF  P       K  
Sbjct: 429 RQYLAKEMGLVKPDRENDQWNFLWVVDFPMFEFNKDENRLEALHHPFCAPNTSDLGDKAE 488

Query: 473 DLLS----IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +        +A  YDLV NG E+  G +R H S +  +  +++G++ E  + +FG L  A
Sbjct: 489 EWAKTLPTARAQAYDLVLNGLELGGGSLRIHDSALQREVLNSIGLAPEEAQEQFGFLVDA 548

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
              G PPHGG+A G+DR+VMLL G  ++R+   FP +Q    L+  +P+ VS  QL +L 
Sbjct: 549 LDMGAPPHGGLAFGVDRMVMLLAGEDSIRDTIAFPKTQQARCLMTAAPAGVSERQLEDLH 608

Query: 589 L 589
           +
Sbjct: 609 V 609


>gi|269792196|ref|YP_003317100.1| aspartyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099831|gb|ACZ18818.1| aspartyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 599

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 329/597 (55%), Gaps = 13/597 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
            R+  CG + +S  GS V L+GW+ R R  GGIIFL++ DH G  QVV NP+      + 
Sbjct: 13  KRSVKCGLVDLSMAGSQVVLNGWLRRRRDLGGIIFLELWDHTGAVQVVINPEVAPEAHDR 72

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK VRSE+V+ I G V  R   T N ++ TGQ+E+ AQ I +LS ++ LP  +       
Sbjct: 73  AKEVRSEYVMAIRGSVQRRPQGTENPDMPTGQVEVVAQDILVLSPSKPLPFEIGEADRVD 132

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R +YRFLDLRR+ +  N+  R+      R  ++   F+E  TP+LT S+PEGARDFL
Sbjct: 133 ENLRLRYRFLDLRRERMQHNLRVRSAAAQFTRNYLVQNGFLEVETPMLTKSTPEGARDFL 192

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G F+ALPQ+PQ +KQ+LM SG DRYFQI  CFRDED R+DR P EF Q+D+EM
Sbjct: 193 VPSRVNPGKFFALPQSPQIFKQILMVSGCDRYFQIVKCFRDEDLRADRQP-EFTQVDLEM 251

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+ ++D+ + +E  +RG+F+E          F RI + +A+  YG+DKPDLR P  M +
Sbjct: 252 SFITEEDVFSLLEGYMRGLFKEILGEEI-PTPFRRITWREAMDLYGSDKPDLRIPEAMVD 310

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE     E     ++       +   +P  G   +R     +   A   G  GLA I  
Sbjct: 311 LTEVM-GFEGSPLQEVKESGGVVKGLRLP-GGAKLSRKEVSNLEARAVELGARGLAVIQR 368

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-IAGDPLKFCSFAADARNHI 420
                   A  GP  K ++      +    ++ DGD+            C      R  +
Sbjct: 369 N-----GEALKGPFVKIMDEAARARLIEASNLGDGDAVLILADRSWRTACEVLGALRLEV 423

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + +G++    + F W++DFP +EW++EE +    H+PFT P+     L   D  S+++ 
Sbjct: 424 FRSMGLV-EEGWRFLWVVDFPLFEWDQEEGRYVSVHHPFTSPKEEDLDLMERDPGSVRSR 482

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG E+  G IR H   V  + F  +G  +E + +RFG L  A   G PPHGG+A
Sbjct: 483 AYDLVLNGSEVGGGSIRIHHPVVQERVFKALGFEEEQLRDRFGFLLDALSYGTPPHGGLA 542

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G DR+ M+L GA+++REV  FP +Q    LL G+PS V   QL EL +       +
Sbjct: 543 LGFDRLTMMLCGARSIREVMAFPKTQRAQCLLSGAPSQVDRSQLDELFIASTAEEAQ 599


>gi|89898734|ref|YP_515844.1| aspartyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|89332106|dbj|BAE81699.1| aspartyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 584

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 229/594 (38%), Positives = 338/594 (56%), Gaps = 14/594 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
           +YRTH C +L +S+VG  VRLSGWVHR R HGG++F+D+RD +GITQ+V   D      +
Sbjct: 2   KYRTHRCNELSLSNVGERVRLSGWVHRYRNHGGVVFIDLRDRFGITQIVCCEDEKPELHQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119
           +  SVRSEWVL ++G V  R     N+N+ TG IE+  ++++ILS A             
Sbjct: 62  LVDSVRSEWVLSVEGTVCRRLEGMENSNLATGDIEVDLEQVDILSKARNLPFSISEDHIN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LD+RR  +   ++ R +++ + R  M  + F E  TP+L  S+PEGARD
Sbjct: 122 VNEELRLEYRYLDMRRGQILDRLIYRHKVMMACRQYMDTQGFTEVVTPVLGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  GSFYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+D+
Sbjct: 182 YLVPSRIYPGSFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFSQIDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF   +++   +E ++  +F     G  +     R+ Y +A   YGTDKPDLR  + +
Sbjct: 241 EMSFATPENLFPIIEQLVVEIFS--VRGINIDLPLPRMTYQEAKDLYGTDKPDLRFGLQL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +  EH     F +F   L+     + + +P  G   +R   D   E+ +  G  GL +I
Sbjct: 299 RDCREHAKEFSFSIFLDQLAQGGTIKGFCVP-GGADMSRKQLDIYTEFVKRYGAMGLVWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             + +     +    VAK  +    +A+    D +D D    IA             R  
Sbjct: 358 KKQEN-----SVASNVAKFASEEVFKAMFADFDAKDNDILLLIAAPESVANQSLDHLRRL 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+E  + + + + F WI DFP +   +E+ KI   H+PFT P      L   D LS+++
Sbjct: 413 IAKERNLYDESQYNFVWITDFPLF--AKEDGKICSEHHPFTAPLEEDIPLLDTDPLSVRS 470

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+EIASG  R H +++  + FS + +S E ++ +FG    A   G PPH GI
Sbjct: 471 SSYDLVLNGYEIASGSQRIHNADLQNKIFSILELSPESIKEKFGFFIDALSFGTPPHLGI 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DRI+M+L  A+++REV  FP +Q   DL+M +P+ +   QL+EL +++  
Sbjct: 531 ALGLDRIMMVLTRAESIREVIAFPKTQKAADLMMSAPAEIMTSQLKELNIKVTS 584


>gi|332664736|ref|YP_004447524.1| aspartyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332333550|gb|AEE50651.1| aspartyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 594

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 232/604 (38%), Positives = 344/604 (56%), Gaps = 24/604 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            YRTH+CG+L ++DV   V+LSGWV   R  G + FLD+RD YGITQ+V + +      E
Sbjct: 1   MYRTHTCGELRMTDVDKTVKLSGWVQTTRDFGAMTFLDLRDRYGITQLVFSMEENAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +  E+V+ I+G V  RS + +N +  TG+IE+ AQ +++L+ ++  P  +  E + 
Sbjct: 61  QARKLGREYVIEIEGKVRERSNKNLNRD--TGEIEIVAQSMKVLNASKVPPFTIEDETDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  +  N++ R+++   +R  +  +NFIE  TP L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRSPVQNNLIFRSKLALEVRKFLSNQNFIEVETPFLIKSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ +KQ+LM +GFDRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTFKQILMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FV ++DILNT E + R +F           +F R+ YDDA+R YG+DKPDLR  +   
Sbjct: 238 MAFVTREDILNTFEALTRHLFLHTLGLE--LGDFPRMSYDDALRLYGSDKPDLRFGMPFA 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG-GGGNRAFCDRMNEWAR--SQGQPGLA 357
           ++T+      F VF    +V        I AKG     R   D + EW +    G  GL 
Sbjct: 296 DLTDLTKGRGFVVFDSAETV------IGINAKGQADYTRKQVDELTEWVKRPQIGAKGL- 348

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
            I+ R +  G +     V K             L+ + GD    +AG+  K      + R
Sbjct: 349 -IYVRYNADGTLK--SSVDKFFTEDQLRDWAQHLEAEPGDLMLIMAGEEEKTRKQLGELR 405

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             + + LG++    F+  W++DFP  EW+E+ ++    H+PFT P+        +D  ++
Sbjct: 406 LEMGRRLGLMKPGDFKPLWVLDFPLLEWDEDTERFYAMHHPFTSPKPDDVVKMASDDRNV 465

Query: 478 ----KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
               +A  YDLV NG EI  G IR +  ++ ++ FS +G S E  E +FG L  AF+ G 
Sbjct: 466 LKGLRADAYDLVLNGVEIGGGSIRIYDRDLQMKNFSLLGFSTEEAEAQFGFLLGAFEFGA 525

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G DR+  ++ G  ++R+   FP +    D+++ +PS ++  QL+EL L    
Sbjct: 526 PPHGGIAFGFDRLCSVMNGQNSIRDFIAFPKNNQGRDMMIDAPSGIADVQLKELSLATTV 585

Query: 594 NPKK 597
              K
Sbjct: 586 KVTK 589


>gi|171743322|ref|ZP_02919129.1| hypothetical protein BIFDEN_02453 [Bifidobacterium dentium ATCC
           27678]
 gi|306823267|ref|ZP_07456643.1| aspartate--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309801923|ref|ZP_07696038.1| aspartate--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|171278936|gb|EDT46597.1| hypothetical protein BIFDEN_02453 [Bifidobacterium dentium ATCC
           27678]
 gi|304553899|gb|EFM41810.1| aspartate--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308221479|gb|EFO77776.1| aspartate--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 599

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 221/610 (36%), Positives = 337/610 (55%), Gaps = 33/610 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++    VG  V L+GWV R R HGG+ F+D+RD+ G+ QVV        E+A+
Sbjct: 6   YRTHHATEVTEELVGQKVTLAGWVDRRRDHGGVAFIDLRDNTGLVQVVI----YDEEMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFG 116
            +RSE+V+ + G V  R     N ++ TG+IE+ A+ IE+L+ ++ LP            
Sbjct: 62  PLRSEFVIRVIGEVRLRPDGNENDHLATGKIEVVAETIEVLAKSDALPFQVSTALENESE 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR ++  N+  R+++  + R  +    F E  TP +  S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSQMSKAARHALEEMGFEEVETPTMIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM+FV+Q+D++   E V+  +++  S G  +     RI + +A+ +YG+DKPDLR  
Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYEIQLPIQRITWQEAMDKYGSDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +T++F ++ FRVF         Y    +   G    R   D   +WA+ +G  GL
Sbjct: 299 NPLVELTDYFKNTPFRVFQAP------YVGAVLFKGGAATPRRQFDAWQDWAKQRGAKGL 352

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E+G +   GPVAK+L+      ++  +  +DGD+ FF AG            
Sbjct: 353 AYVVFA--ENGELK--GPVAKNLSEEERNGLKEAVGAEDGDAVFFAAGRRTSAQELLGAV 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A   G++  + F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 409 RVELADRAGLLKPDDFAFTWVVDFPLFKTTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H  ++  +    +GI+ E   ++FG L  
Sbjct: 469 DTFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGITPEEAADKFGFLLE 528

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH GIA G DR   +L GA ++R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 529 AFKYGAPPHAGIALGWDRTAAILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAET 588

Query: 588 GLRIVENPKK 597
           G+    +  +
Sbjct: 589 GVDYDPDEDE 598


>gi|212716936|ref|ZP_03325064.1| hypothetical protein BIFCAT_01880 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660221|gb|EEB20796.1| hypothetical protein BIFCAT_01880 [Bifidobacterium catenulatum DSM
           16992]
          Length = 599

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 221/610 (36%), Positives = 338/610 (55%), Gaps = 33/610 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++    VG  V LSGWV R R HGG+ F+D+RD+ G+ QVV        ++A+
Sbjct: 6   YRTHHATEVTEELVGQKVTLSGWVDRRRDHGGVAFIDLRDNTGLVQVVI----YDEDMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFG 116
            +RSE+V+ + G V  R     N ++ TG+IE+ A+ IE+L+ ++ LP            
Sbjct: 62  PLRSEFVIQVVGEVRLRPDGNENDHLATGKIEVVAESIEVLAKSDALPFQVSTALENESE 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR ++ +N+  R+++  + R  +    F E  TP +  S+PEG
Sbjct: 122 NKLPGEEVRLKYRYLDLRRPSMQRNLKLRSQMSKAARHALEEMGFEEVETPTMIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM+FV+Q+D++   E V+  +++  S G  +     RI + +A+ +YG+DKPDLR  
Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYEIQLPIQRITWQEAMDKYGSDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +T++F ++ FRVF         Y    +   G    R   D   +WA+ +G  GL
Sbjct: 299 NPLIELTDYFKNTPFRVFQAP------YVGAVLFKGGAATPRRQFDAWQDWAKQRGAKGL 352

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E+G +   GPVAK+L+      ++  +  +DGD+ FF AG  +         
Sbjct: 353 AYVVFA--ENGELK--GPVAKNLSEEERAGLKEAVGAEDGDAVFFAAGRRISAQELLGAV 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A   G++  + F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 409 RVELADRAGLLKPDDFAFTWVVDFPLFKAADDPDDDDVAVGHSKWTSMHHPFTMPSKDWI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H  ++  +    +GI+ E   ++FG L  
Sbjct: 469 DTFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGITPEEAADKFGFLLE 528

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH GIA G DR   +L GA ++R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 529 AFKYGAPPHAGIALGWDRTAAILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAET 588

Query: 588 GLRIVENPKK 597
           G+       +
Sbjct: 589 GVDYDPEEDE 598


>gi|297566455|ref|YP_003685427.1| aspartyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296850904|gb|ADH63919.1| aspartyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 580

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 238/591 (40%), Positives = 337/591 (57%), Gaps = 25/591 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH CG +    VG  V L GWV+R R  GG+IF+D+RD  G+ QVV +P S  F  A  
Sbjct: 3   RTHYCGKVNEQLVGQTVTLEGWVNRRRDLGGLIFIDLRDREGLVQVVVDPGSPAFTEADR 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG------ER 118
           VR+EWV+ + G V  R  E IN  + +G++E+ A+ +E+LS A  LP  V        ++
Sbjct: 63  VRNEWVVRVQGKVRERPVEQINPKLQSGKVEVVAEGLEVLSEARTLPFQVDAGWRGEEDQ 122

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R + R +DLRR  LH+N+  R R+I ++   +    F    TP LT S+PEGAR
Sbjct: 123 GVSEEVRLRNRVVDLRRRRLHQNLRLRHRVIAAIYRFLDQAGFTSVETPYLTRSTPEGAR 182

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR+  G FYALPQ+PQ +KQ+LM +G+DRYFQIA CFRDED R+DR P +F QLD
Sbjct: 183 DFLVPSRLAPGHFYALPQSPQLFKQMLMVAGYDRYFQIARCFRDEDLRADRQP-DFTQLD 241

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSFVEQ+DIL   E +   V +E      +   F R+ Y  A+  YG+DKPDLR  + 
Sbjct: 242 MEMSFVEQEDILAINEQLAAYVVKEALGIE-LPLPFPRLTYQQAMDTYGSDKPDLRFGLE 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +  VT  F   EFR F+ + +V        +       +R   + +   A+S+G  GLA+
Sbjct: 301 LQEVTALFAGGEFRAFAGVETVKCLVVPTLL-------SRREIEELAALAKSKGAAGLAW 353

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
             +   E G ++  G +AK +      A+  ++   DG +  F+AG   K        R 
Sbjct: 354 AKF---EGGELS--GGIAKFIP----AALLEQVRPSDGQTLLFVAGPWRKAVESLGAVRL 404

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + + LG+I    + F W++DFP  EW+EE  +  + H+PFT P      L  +D   ++
Sbjct: 405 ELGRRLGLIGPG-YRFLWVVDFPLLEWDEESGRWTYMHHPFTSPNLDDLPLLESDPGKVR 463

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+ YDLV NG E+  G IR H  ++  + F+ +GIS    + +FG L  A   G PPHGG
Sbjct: 464 AYAYDLVFNGLEVGGGSIRIHRRDLQERMFALLGISLAEAQEKFGFLLEALSYGAPPHGG 523

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           IA G+DR +  L G +++REV  FP ++   + L G+PS VS  QL ELG+
Sbjct: 524 IAWGLDRFIATLAGEESIREVIAFPKNKEGRETLTGAPSPVSPAQLAELGI 574


>gi|317488832|ref|ZP_07947363.1| aspartyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316912061|gb|EFV33639.1| aspartyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 592

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 221/598 (36%), Positives = 344/598 (57%), Gaps = 16/598 (2%)

Query: 1   MHRY--RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           M+ Y   T +CG+L   DVG  V L+GW    R HGG+IF+D+RD  G TQVV +PD   
Sbjct: 5   MNEYCMHTATCGELRKGDVGREVVLTGWAWHNRDHGGLIFIDLRDRAGYTQVVVDPDCVS 64

Query: 59  ---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
              F  A+ +  E+VL + G V  R AE +N N+ TG+IE+ A+ +E+L+ +   P  + 
Sbjct: 65  ADDFAKAEHLGREYVLKVAGTVRERGAEAVNPNMATGEIEVLAKSVEVLNTSVTPPFSIE 124

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
              E  E+ R K+R+LD+RR  + + +  R ++  +MR  +    F+E  TPIL  S+PE
Sbjct: 125 DGIETDETTRMKWRYLDIRRPEMFEALHLRHKVAQAMRGALNERGFLEVETPILANSTPE 184

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARD++VPSR N G FYALPQ+PQQ+KQ+LM  G +RY+QIA CFRDED R+DR P EF 
Sbjct: 185 GARDYIVPSRPNPGRFYALPQSPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQP-EFT 243

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           Q+D+EM FV+ +D++N ME+V+             +    R+ Y +++ R+G D+PD R 
Sbjct: 244 QVDIEMGFVQGEDVMNLMEDVMAETLAAVG--VEHAFPLERMQYRESMDRFGNDRPDTRF 301

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQP 354
            + + ++T+   ++ F+VFS +       +  AI AKG G  +R   +++ + A   G  
Sbjct: 302 GMELVDITDIVKNTGFKVFSSVAQSGGVVK--AINAKGAGDWSRGDVEKLADIAAENGAK 359

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           G+A+I +  D         P+ K  +     A++  +D++ GD   F A       +  +
Sbjct: 360 GMAWIAFTTDG----KEKSPIIKFFSDEEFAALKEAMDVEPGDLLLFAADTYEVASAVLS 415

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R H+A  L  +     +  W+++FP ++++E+EKK    H+PFT           +D 
Sbjct: 416 ALRLHMADALN-VPREGHQLLWVVNFPMFKYDEDEKKYAAEHHPFTHVLDEDVDKIESDP 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L+  ++ YDLV +GFE+  G IR H ++         G++ E +E +FG L  A + G P
Sbjct: 475 LACGSYSYDLVMDGFEVGGGTIRIHNADEQRAVLRTCGLTDEEIEEKFGHLIHALELGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           PHGGIA G+DR+VMLL G  ++R+V  FP + +  D + G+PS V+  QL+E+ LR +
Sbjct: 535 PHGGIALGLDRLVMLLGGKASIRDVIAFPKTSSASDPMTGAPSAVTGRQLKEVNLRTL 592


>gi|313682127|ref|YP_004059865.1| aspartate--tRNA(asn) ligase [Sulfuricurvum kujiense DSM 16994]
 gi|313154987|gb|ADR33665.1| aspartate--tRNA(Asn) ligase [Sulfuricurvum kujiense DSM 16994]
          Length = 584

 Score =  570 bits (1468), Expect = e-160,   Method: Composition-based stats.
 Identities = 231/598 (38%), Positives = 344/598 (57%), Gaps = 21/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           R+H C DL  ++VG  V L GW +  R HGGI+F+D+RD  G+ Q+V +P  ++   ++A
Sbjct: 2   RSHFCTDLSEANVGDNVILCGWANSYRDHGGIVFIDLRDKSGLIQLVCDPADNAHAHKLA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL   G V +R    +N  + TG IE+  +++ I + +E +P    G+    E
Sbjct: 62  SEVRDEFVLIAHGRVRNRGEGLVNPRLKTGAIEVVVEELIIENRSEPVPF-GIGDNSVGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLR  +++   + R++   + R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 121 EIRLKYRYLDLRNPSMYNTFMLRSKAAIAARNVLDRLGFLEVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQ+PQ +KQLLM  GFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHEGEFYALPQSPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+D++   E ++ G+F   + G+ V   F RI Y+DA+  YG+DKPDLR  + M +V
Sbjct: 240 FCNQEDVIRVAEELITGMFA--AAGHEVHTPFNRIKYNDAMEWYGSDKPDLRYDLKMIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F   +  +F+ I +      + A+   G     ++       ++ R  G  GL Y  
Sbjct: 298 IDIFARCDNEIFTSIAANPKMNRIKALRVPGADLVFSKREMKSFEDYVRKFGAKGLGYFQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K     + + +  R  M+ GD  FF AGD      +    R  I
Sbjct: 358 MKED-----GLKGPLEKFFAPEDLQLLVERTGMEVGDVVFFGAGDKKTVWDYMGRFRIFI 412

Query: 421 AQ--ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           A+  ++ +I+ + FEF W++DFP +E   E+ ++   H+PFTMP      L    L  I+
Sbjct: 413 AEHEKMNLIDQDRFEFVWVVDFPMFEI--EDGRVKALHHPFTMP----RDLNHEHLEDIE 466

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H   +  Q F+ +GI +E  + +FG L  A + G PPHGG
Sbjct: 467 SIAYDIVLNGTELGGGSIRIHKQALQEQIFTLLGIGEEEAQEKFGFLLDALKFGAPPHGG 526

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            A G DR +MLL   +++R+V  FP +Q    ++  +PS V + QLREL +R+ E+ K
Sbjct: 527 FAIGFDRFMMLLSKKESIRDVIAFPKTQKASCIMTQAPSPVELTQLRELHIRLRESVK 584


>gi|225429171|ref|XP_002271358.1| PREDICTED: similar to tRNA synthetase class II (D, K and N) family
           protein [Vitis vinifera]
 gi|297736395|emb|CBI25118.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score =  570 bits (1468), Expect = e-160,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 337/597 (56%), Gaps = 18/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG+L V DVG  VR+ GWV   R HGG+ FL++RDH GI QV   PD         
Sbjct: 68  RTGFCGELSVDDVGKRVRICGWVALHRVHGGLTFLNLRDHTGIVQVTTLPDEFPKAHSTV 127

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-----VFGE 117
             +R E+V+ ++G+V SR +E+IN  + TG IE++ + +++L+                +
Sbjct: 128 NELRLEYVIAVEGIVRSRPSESINKKMRTGLIEVAVEHVQVLNAVTSKLPFLVTTADDAK 187

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEG 176
               E IR +YR LDLRR  ++ NI+ R R++  +R  +     F+E  TPIL+ S+PEG
Sbjct: 188 DTVKEEIRLRYRCLDLRRQQMNSNIMLRHRVVKLIRRYLEDIHGFVEIETPILSRSTPEG 247

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSRV  G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Q
Sbjct: 248 ARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQ 306

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDME++F   +D+L   E+++R VF E      + N F R+ Y +A+ RYG+D+PDLR  
Sbjct: 307 LDMELAFTPLEDMLRLNEDLIRQVFLEIKGI-QLPNPFPRLTYAEAMSRYGSDRPDLRFD 365

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR--MNEWARSQGQP 354
           + +  V++ F  + F+VF+  L+     +V  +P+     +     +  +   A   G  
Sbjct: 366 LELREVSDVFSETTFKVFADTLASGGIIKVLCVPSGAKHYSNTALKKGDIYSEAIKSGAK 425

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GL ++  ++ + G V G+  +   L+  N + +  +     GD   F  GD         
Sbjct: 426 GLPFL--KVLDDGEVEGIPALVSSLDPTNKKRLLKQCSAGSGDLILFAVGDHASVNKTLD 483

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  IA ELG+++ +     W+ DFP +EWN  E++++  H+PFT P          DL
Sbjct: 484 RLRVFIAHELGLVDHSRHSILWVTDFPMFEWNSAEQRLEALHHPFTAPNPEDM----EDL 539

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S +A  YD+V NG EI  G +R    EV  +    VGIS E  E +FG L  A   G P
Sbjct: 540 SSARALAYDMVYNGVEIGGGSLRIFKREVQEKVLEIVGISPEQAEAKFGYLLEALDMGAP 599

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PHGGIA G+DR+VMLL GA ++R+V  FP +      L  +PS V  +QL++L  + 
Sbjct: 600 PHGGIAYGLDRLVMLLAGANSIRDVIAFPKTTTAQCALTRTPSEVDPQQLKDLSYQT 656


>gi|222474873|ref|YP_002563288.1| aspartyl-tRNA synthetase (aspS) [Anaplasma marginale str. Florida]
 gi|255002844|ref|ZP_05277808.1| aspartyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
 gi|255003976|ref|ZP_05278777.1| aspartyl-tRNA synthetase [Anaplasma marginale str. Virginia]
 gi|254781711|sp|B9KHS0|SYD_ANAMF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|222419009|gb|ACM49032.1| aspartyl-tRNA synthetase (aspS) [Anaplasma marginale str. Florida]
          Length = 592

 Score =  570 bits (1468), Expect = e-160,   Method: Composition-based stats.
 Identities = 290/599 (48%), Positives = 391/599 (65%), Gaps = 10/599 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M+ YRTH C +LGV+ VG+ V LSGWV+R R HGG++F+D+RD YGITQ++ N   +   
Sbjct: 1   MNIYRTHVCNELGVAHVGNEVALSGWVYRKRDHGGLLFVDLRDFYGITQLIFNESENPEL 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F    ++  E V+ + G+V  RS + +NA+I TG +E+    + ++S A  LPL V    
Sbjct: 61  FNRMATIGLESVITVRGIVAERSEDNVNASIETGHVEVKVSTLTVVSEAAPLPLHVPTSF 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
            YPE IR ++RFLDLR D +  +I+ R+ +++ +R  M A  FIE  TPILT+SSPEGAR
Sbjct: 121 SYPEDIRLQHRFLDLRCDKVKNSILLRSMVVSELRRAMEALGFIEVHTPILTSSSPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D++VPSR + G FYALPQAPQ +KQLLM  GFD+YFQIAPCFRDED R+DR PGEFYQLD
Sbjct: 181 DYIVPSRTHAGKFYALPQAPQIFKQLLMVGGFDKYFQIAPCFRDEDSRADRSPGEFYQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTV-SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           MEMSFV Q+D+   +E VL G+F +F+  +      F RI Y D++ RYG+DKPDLRNP+
Sbjct: 241 MEMSFVTQEDVFAAIEPVLYGLFAKFAGADKKVDRQFPRITYRDSMIRYGSDKPDLRNPL 300

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           ++ +VTE F +S FR F   +           P   G   R+F D   E A+  G  GL 
Sbjct: 301 VISDVTEIFRNSGFRTFQAGVEAGEVVRAIPAPNTSGK-PRSFFDDKIERAKEFGARGLG 359

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+ +  D        GP+AK L+      IR    + +GDS FF++    K   FA   R
Sbjct: 360 YVTYEADG----TAKGPIAKFLSEDELARIRSAAGVGNGDSVFFMSDTADKAADFAGKIR 415

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  ELG+I  + F+FCWI+DFP+++   E+ ++DF HNPF+MPQG ME+L+  + L I
Sbjct: 416 ELLGLELGLIEHDTFKFCWIVDFPYFK--CEDGELDFCHNPFSMPQGEMEALEQQNPLDI 473

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A+QYD+VCNG EI+SG IRNH  +VM +AFS VG  ++ V ++FG L RAF+ G PPHG
Sbjct: 474 IAYQYDIVCNGIEISSGAIRNHRLDVMYKAFSMVGYDEQTVNSKFGALVRAFKFGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           G+A GIDRIVMLL  A N+REV  FP++Q   DLLMG+PS VS   L+EL + +    K
Sbjct: 534 GLAPGIDRIVMLLADAPNIREVICFPLNQTGEDLLMGAPSEVSPAHLQELSIALNIKRK 592


>gi|110636537|ref|YP_676744.1| aspartyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|122967031|sp|Q11YW2|SYD_CYTH3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110279218|gb|ABG57404.1| aspartyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 616

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 222/617 (35%), Positives = 339/617 (54%), Gaps = 23/617 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+ +CG+L +SDV   V L GWV RVR  GG+I++D+RD YG+TQ++     +  E+ ++
Sbjct: 3   RSQTCGELRISDVNKEVTLCGWVARVRDKGGMIWVDLRDRYGMTQLILEEGKSSAELLET 62

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            R    E+V+   G V+ R A+  N  + TG IE+    + IL+ ++  P  +  E +  
Sbjct: 63  SRKLGREFVIRATGNVIERVAK--NPKMPTGDIEVKITALTILNESKTPPFLIEDETDGG 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +  R KYR+LDLRRD + KN+  R ++    R  + A NF+E  TP+L  S+PEGARDF+
Sbjct: 121 DETRMKYRYLDLRRDAVRKNLELRHKVSRETRTYLDANNFLEVETPVLIKSTPEGARDFV 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM +GFDRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 181 VPSRMNPGQFYALPQSPQTFKQLLMVAGFDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQ+DILN  E ++R +F+     +       R+ + DA++ YG+DKPD+R  +    
Sbjct: 240 SFVEQEDILNMFEGLVRHLFKTVKEFDLPEV--PRMLFADAMKYYGSDKPDIRFGMKFVE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAYI 359
           +T+      F+VF +   V                 R   D + E+ +    G  G+ ++
Sbjct: 298 LTDIVQSQGFQVFDEANLVVGINAEGC-----AEYTRKEIDALTEFVKRPQVGAKGMVWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  D          V K  +  + + I  R + + GD    ++G+  K      D R  
Sbjct: 353 RYAADG----TLKSSVDKFYSADDLKKIAERFNAKPGDLMLILSGNGNKVRGQLNDLRLE 408

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME--SLKGNDLLSI 477
           I   LG+   + F   W++DFP  E+ EEE++    H+PFT P+       L  + L S+
Sbjct: 409 IGSRLGLRPKDKFAALWVIDFPLLEFGEEEQRWFAMHHPFTSPKDIDAFMKLPFDQLGSV 468

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A  YDLV NG E+  G IR +   V  + F  +G ++E  + +FG L  AF+ G PPH 
Sbjct: 469 NANAYDLVINGVEVGGGSIRIYDRTVQNKMFEVLGFTEEEAKAQFGFLLEAFEYGAPPHA 528

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           G+A G DR+  +  G  ++R+   FP + +  D+++ SPS +  +QL+EL + +    K 
Sbjct: 529 GLAFGFDRLCSIFGGVDSIRDFIAFPKNNSGRDVMIDSPSVIDDKQLKELSIDVKVADK- 587

Query: 598 ILKISVTTILRNVYGLK 614
             +I +  I+   + +K
Sbjct: 588 -GRIGIPNIIEETFNVK 603


>gi|291545264|emb|CBL18373.1| aspartyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 596

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 274/598 (45%), Positives = 382/598 (63%), Gaps = 14/598 (2%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           +RYR H    +G  ++G  VR+SGWV  +R HGGI F+D+RDHYGI Q+    +    E 
Sbjct: 5   NRYRDHLTSMIGEGEIGKTVRVSGWVENIRDHGGIKFIDLRDHYGIVQITMQQNEGLLE- 63

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREY 120
              V  E  + + G V+ R A T N  I TG +E+ AQ +EIL      LP  V   RE 
Sbjct: 64  --GVNKESAVSVSGQVVKRDASTYNDKIATGTVEIVAQTLEILGKVTVPLPFEVPSSRES 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E IR +YRFLD+R   +H+NIV R+ I++ MR +M +  F+E  TPIL+ SSPEGARD+
Sbjct: 122 GEDIRLRYRFLDMRNHRVHQNIVFRSNIMSFMREKMTSLGFLELQTPILSTSSPEGARDY 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           L+PSR + G FYALPQAPQ +KQL M SGFD+YFQ+APCFRDED R+DR PGEFYQLD+E
Sbjct: 182 LIPSRKHHGKFYALPQAPQIFKQLYMVSGFDKYFQLAPCFRDEDARADRTPGEFYQLDLE 241

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF  Q+++    E V   + E+FSN       F RI Y DA+ +YG+DKPDLRNP+ + 
Sbjct: 242 MSFATQEEVFAVAEEVFPAIIEKFSNKPFTKGPFPRITYADAMLKYGSDKPDLRNPLFII 301

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++ FV S+F+ FS     N       +P K G  ++ F   M E+A S G  GL Y+ 
Sbjct: 302 DLSDQFVGSDFKPFS-----NKTVRGIRVP-KMGEKSKTFFKSMEEYALSIGMKGLGYVK 355

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                  N++ +GP+ K L   + E I+ R +++ GD  +FIA        FA   R  +
Sbjct: 356 V----DENMSFLGPIDKFLTDASREEIKRRAELEPGDVLYFIADSKKNAEKFAGQIRTEV 411

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A  +G+I+ + FE CWI+DFP YE +EE  K  F HNPF+MPQG +E+L   +   + A+
Sbjct: 412 ANRMGLIDNDRFEICWIVDFPMYEEDEETGKPIFTHNPFSMPQGELEALNTKNPCDVLAY 471

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E+ASG +RNH  EVM++AF   G ++E V  +FG LY AF+ G PPH G+A
Sbjct: 472 QYDVVCNGVELASGAVRNHDPEVMVKAFEIAGYTEEDVAAKFGALYSAFKFGAPPHAGMA 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
            GIDR++MLLL  +++REV  FP++ N  DLL+G+P+ V+ +QLRE+ +++ + P+ +
Sbjct: 532 FGIDRMIMLLLDEESIREVIAFPLNSNAQDLLLGAPTQVTEQQLREVHIKVRQRPQDL 589


>gi|311064068|ref|YP_003970793.1| aspartyl-tRNA synthetase AspS [Bifidobacterium bifidum PRL2010]
 gi|310866387|gb|ADP35756.1| AspS Aspartyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 598

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 223/609 (36%), Positives = 335/609 (55%), Gaps = 33/609 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V L+GWV R R HGG+ F+D+RD+ G+ Q+V        E+A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDNTGLVQIVI----YDEEMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFG 116
            +RSE+V+ + G V  R     N ++ TG+IE+  + I++L+ ++ LP            
Sbjct: 62  PLRSEFVIQVTGEVRLRPDGNENTHLATGKIEVVVETIDVLAKSDALPFQVSTALENESE 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEEMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM+FV+Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYDVQLPIQRITWQDAMDKYGSDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +TE+F  + FRVF         Y    +   G    R   D   EWA+ +G  GL
Sbjct: 299 NPLVELTEYFKDTPFRVFQA------DYVGAVVFKGGAATPRRQFDAWQEWAKQRGAKGL 352

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E G +   GPVAK+L+    E +   +  + GD+ FF AG            
Sbjct: 353 AYVSF--TEDGELK--GPVAKNLSDSEREGLMAAVGAESGDAVFFAAGSRESSQLLLGAV 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A+  G+++   F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 409 RVELARRAGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H  ++  +  + +GI+ E  + +FG L  
Sbjct: 469 DKFDQDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQDRVLNVLGIAPEEAKEKFGFLLD 528

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH GIA G DR V +L GA  +R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 529 AFKFGAPPHAGIALGWDRTVSILAGADTIRDVIAFPKAGGGRDPLTGAPAPISDEQRAET 588

Query: 588 GLRIVENPK 596
           G+    + +
Sbjct: 589 GVDYDPDAE 597


>gi|94985225|ref|YP_604589.1| aspartyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|123079904|sp|Q1IZB4|SYD_DEIGD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|94555506|gb|ABF45420.1| aspartyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 577

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 229/590 (38%), Positives = 322/590 (54%), Gaps = 20/590 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT   G+L  S VG  V L GW +R R  GG+IF+++RD  G  QV   PDS  F  A +
Sbjct: 3   RTCYIGELNASLVGQTVILQGWANRRRDLGGLIFIELRDRSGSIQVEVEPDSPAFHEADT 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VR+E+VL ++G    R  E     +     E+ A ++ +LS A+  P  +       E I
Sbjct: 63  VRAEYVLEVEGRFQPRPEEQRKGGLA--DYEVIALRVTVLSAAKTPPFELDKGESVAEDI 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  + ++++ R+R + +    + AE F++  TP+LT S+PEGARDFLVPS
Sbjct: 121 RLKYRYLDLRRPEMQRHLMLRSRAVAAATAFLDAEGFVQVETPMLTRSTPEGARDFLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+N G FYALPQ+PQ +KQLLM +GFDRY+Q A CFRDED R+DR P +F QLDMEMSFV
Sbjct: 181 RLNPGEFYALPQSPQLFKQLLMIAGFDRYYQFARCFRDEDLRADRQP-DFTQLDMEMSFV 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            Q+D+L+  E +L  VF    +   +   F R+ Y +A+ RYG+DKPDLR      +VT+
Sbjct: 240 TQEDVLDVQERLLAHVFRTVLDYE-LPLPFPRLSYQEAMDRYGSDKPDLRFDRAFADVTD 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F   EF  F+   +V                 R   D +   A+  G  GLA+     D
Sbjct: 299 LFRGGEFGAFADAETVK--------VLAAPALTRKQLDELERVAKQNGAKGLAWARREGD 350

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
                   G +++ L      A+  R  ++ G +  F AG+  K  +     R  +    
Sbjct: 351 -----GLTGGISRFLG-EQAAALLERTGVEPGGTLLFSAGEWKKAVTALGAVRLALRDLF 404

Query: 425 GIINCN-CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND-LLSIKAFQY 482
            +      F+  W++DFP  E++EE     + H+PFT P+     L G +    I+A  Y
Sbjct: 405 DLAAGGPRFQVAWVLDFPQLEFDEEAGSWTYMHHPFTAPRPEDIPLFGTERQGEIRAQAY 464

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NGFE+  G IR H   V  Q F  +G+S+     +FG    A   G PPHGGIA G
Sbjct: 465 DLVLNGFEVGGGSIRIHDPAVQTQMFQAIGLSEAEAREKFGFFLDALSYGTPPHGGIAWG 524

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            DR+VM++ GA ++REV  FP +    DL+ G+PS VS  QL E+G+ + 
Sbjct: 525 FDRLVMVMAGASSIREVIAFPKNNRGVDLMAGAPSPVSPAQLAEVGVAVT 574


>gi|224282750|ref|ZP_03646072.1| aspartyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313139908|ref|ZP_07802101.1| aspartyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313132418|gb|EFR50035.1| aspartyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 598

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 223/609 (36%), Positives = 335/609 (55%), Gaps = 33/609 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V L+GWV R R HGG+ F+D+RD+ G+ Q+V        E+A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDNSGLVQIVI----YDEEMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFG 116
            +RSE+V+ + G V  R     N ++ TG+IE+  + I++L+ ++ LP            
Sbjct: 62  PLRSEFVIQVTGEVRLRPDGNENTHLATGKIEVVVETIDVLAKSDALPFQVSTALENESE 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEEMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM+FV+Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYDVQLPIQRITWQDAMDKYGSDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +TE+F  + FRVF         Y    +   G    R   D   EWA+ +G  GL
Sbjct: 299 NPLVELTEYFKDTPFRVFQA------DYVGAVVFKGGAATPRRQFDAWQEWAKQRGAKGL 352

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E G +   GPVAK+L+    E +   +  + GD+ FF AG            
Sbjct: 353 AYVSF--TEDGELK--GPVAKNLSDSEREGLMAAVGAESGDAVFFAAGSRESSQLLLGAV 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A+  G+++   F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 409 RVELARREGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H  ++  +  + +GI+ E  + +FG L  
Sbjct: 469 DKFDQDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQDRVLNVLGIAPEEAKEKFGFLLD 528

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH GIA G DR V +L GA  +R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 529 AFKFGAPPHAGIALGWDRTVSILAGADTIRDVIAFPKAGGGRDPLTGAPAPISDEQRAET 588

Query: 588 GLRIVENPK 596
           G+    + +
Sbjct: 589 GVDYDPDAE 597


>gi|170017025|ref|YP_001727944.1| aspartyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|238688960|sp|B1MY98|SYD_LEUCK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169803882|gb|ACA82500.1| Aspartyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 589

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 216/595 (36%), Positives = 325/595 (54%), Gaps = 12/595 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEI 61
             RT   G +    +   V LSGWV + R  G +IF+D+RD  GI Q+  N   +    +
Sbjct: 1   MKRTTYAGLVDEKYLNQTVTLSGWVQKRRDFGDLIFVDLRDREGIVQLTFNATHAEALAV 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+++R+E+V+ + G V+ R A  IN  I +GQIE+   + EIL+ ++  P  +       
Sbjct: 61  AENMRNEYVISVTGQVVRREASQINNKIHSGQIEIDVIEAEILATSKTPPFYIEDNVNAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E ++ +YR+LDLRR  + KN+  R++I++S    M   +FI   TPIL  S+PEGARD+L
Sbjct: 121 EELKLQYRYLDLRRPEMQKNLRIRSKIMSSAMHFMDQNDFINIETPILAKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  GSFYALPQ+PQ +KQLLM SGFDRYFQIA  FRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRIFPGSFYALPQSPQLFKQLLMGSGFDRYFQIARAFRDEDLRGDRQP-EFTQMDVET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+  D+I   +   ++ +  +  N +  +     + + +++ R+GTDKPDLR    + +
Sbjct: 240 SFMSADEIRELVNAWVKAMMSDVVNFDLDTTKIPTLTWQESMDRFGTDKPDLRIAYELKD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V+E    SEF VF+K +      +  A+P      +R   D+M ++    G  GLA++  
Sbjct: 300 VSETVKSSEFGVFAKAVEAGGVVKAIAVPGGAENYSRKDIDKMAQYIERFGAKGLAWLKV 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                 +    GP+AK     N  A+      + GD   F AG      +     R   A
Sbjct: 360 T-----DEGISGPIAKFFP--NHAALLQVTGAKPGDLLLFGAGRNDIVAATLDYLRRQTA 412

Query: 422 QELGIIN-CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           ++L +I+  N + F WI+D+P +E++E+  +   AH+PFTMP            D     
Sbjct: 413 KDLNLIDMTNPWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPNEEDLHYLDDGEDPHQAH 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+ SG IR H  ++  +    +G + E     FG L      G PP GG
Sbjct: 473 AQSYDLVLNGYELGSGSIRIHRMDIQEKMLKALGFTPEAAHEAFGFLLEGMTFGFPPMGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           IA G+DR+ MLL G +N+REV  FP +    + +  +P+ V  +Q+ +LGL + +
Sbjct: 533 IALGLDRLAMLLAGQENIREVIAFPKNSRATEPMTQAPTRVDHKQVNDLGLFVSD 587


>gi|241895558|ref|ZP_04782854.1| aspartyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241871136|gb|EER74887.1| aspartyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 601

 Score =  568 bits (1465), Expect = e-160,   Method: Composition-based stats.
 Identities = 208/585 (35%), Positives = 322/585 (55%), Gaps = 11/585 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
             RT+  G +    +   V L GWV + R  GG+IF+D+RD  GI Q+  + +      +
Sbjct: 1   MKRTNYAGLIDEKYLDQTVTLQGWVQKRRDLGGLIFVDLRDREGIVQLAFSNEFGEEALK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+ +R+E+V+ I G V SR    +N ++ +G+IE+     +ILS ++  P  +  +   
Sbjct: 61  VAEDMRTEYVIEIVGDVKSRGEGAVNEHLHSGKIEVHVTSAKILSASKTTPFYIEDDINV 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  + +N+  R++I  +    + A  FI+  TP L  S+PEGARD+
Sbjct: 121 SDELRLKYRYLDLRRPEMQRNLRIRSKITAATHEFLDANGFIDIETPYLAKSTPEGARDY 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  GSFYALPQ+PQ +KQLLM +GFDRY+Q+A  FRDED R DR P EF QLD+E
Sbjct: 181 LVPSRVYPGSFYALPQSPQLFKQLLMGAGFDRYYQVARAFRDEDLRGDRQP-EFTQLDVE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+ QD+I++ + + +  + +   N          + Y D++RR+GTDKPD+R  + + 
Sbjct: 240 MSFMNQDEIMDLVSDWVAAIMKRTVNYYLDKATIPVLDYADSMRRFGTDKPDMRFGMELQ 299

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +++     +EF VF+  +      +   +P      +R   D+M ++    G  GLA++ 
Sbjct: 300 DLSALMADAEFGVFANAIKNGGEVKAIVVPGGANHYSRKDIDKMAQYVTRFGAKGLAWLK 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                 G+    GP+AK L      A+    + + GD   F A +     +     R   
Sbjct: 360 V-----GDEGVSGPIAKFLKAKE-AALLETTNAKSGDLLLFAADNANVVAATLDALRRRT 413

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS--IK 478
           AQEL +I+ N + F W++++P +++  EE +   AH+PFTMP      L      +    
Sbjct: 414 AQELELIDENNWAFAWVVNWPLFDYQPEEDRWIAAHHPFTMPNEEDLPLLATTEGAHQAH 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+ SG IR H  +V  +  + +G +KE     FG L    + G PP GG
Sbjct: 474 AQSYDLVLNGYELGSGSIRIHQMDVQEKMLAALGFTKEAAHEAFGFLLEGMEYGFPPMGG 533

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
           IA G+DR+ MLL G  N+REV  FP +    + +  +P+ V+  Q
Sbjct: 534 IALGLDRLAMLLAGQDNIREVIAFPKNSKATEPMTEAPTPVAKAQ 578


>gi|295106097|emb|CBL03640.1| aspartyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 592

 Score =  568 bits (1465), Expect = e-160,   Method: Composition-based stats.
 Identities = 221/598 (36%), Positives = 342/598 (57%), Gaps = 16/598 (2%)

Query: 1   MHRY--RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           M+ Y   T +CG+L   DVG  V L+GW    R HGG+IF+D+RD  G TQVV +PD   
Sbjct: 5   MNEYCMHTATCGELRRGDVGREVVLTGWAWHNRDHGGLIFIDLRDRAGYTQVVVDPDCVS 64

Query: 59  ---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
              F  A+ +  E+VL I G V  R AE +N N+ TG+IE+ A+ +E+L+ +   P  + 
Sbjct: 65  ADDFAKAEHLGREYVLKIAGTVRERGAEAVNPNMATGEIEVLAKSVEVLNTSVTPPFSIE 124

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
              E  E+ R K+R+LD+RR  +++ +  R  +  +MR  +    F+E  TPIL  S+PE
Sbjct: 125 DGIETDETTRMKWRYLDIRRPEMYQALHLRHTVAQAMRGALNERGFLEVETPILANSTPE 184

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARD++VPSR N G FYALPQ+PQQ+KQ+LM  G +RY+QIA CFRDED R+DR P EF 
Sbjct: 185 GARDYIVPSRPNPGRFYALPQSPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQP-EFT 243

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           Q+D+EM FV+ +D++N ME+V+          +       R+ Y +++ R+G D+PD R 
Sbjct: 244 QVDIEMGFVQGEDVMNLMEDVMAETLAAVGVEHAFPLQ--RMQYRESMDRFGNDRPDTRF 301

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQP 354
            + + ++T+    + F+VFS +       +  AI AKG G  +R   +++ + A   G  
Sbjct: 302 GMELVDITDIVKDTGFKVFSSVAQSGGVVK--AINAKGAGDWSRGDVEKLADIAAENGAK 359

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           G+A+I +  D         P+ K  +     A++  +D++ GD   F A       +  +
Sbjct: 360 GMAWIAFTSDG----KEKSPIIKFFSDEEFAALKEAMDVEPGDLLLFAADTYEVASAVLS 415

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R H+A  L  +     +  W+++FP + ++E+EKK    H+PFT           +D 
Sbjct: 416 ALRLHMADALN-VPREGHQLLWVVNFPMFRYDEDEKKYAAEHHPFTHVLDEDVDKIESDP 474

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L+  ++ YDLV +GFE+  G IR H ++         G++ E ++ +FG L  A + G P
Sbjct: 475 LACGSYSYDLVMDGFEVGGGTIRIHNADEQRAVLRTCGLTDEEIDEKFGHLIHALELGAP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           PHGGIA G+DR+VMLL G  ++R+V  FP + +  D + G+PS V+  QL+E+ LR +
Sbjct: 535 PHGGIALGLDRLVMLLGGKASIRDVIAFPKTSSASDPMTGAPSAVTGRQLKEVNLRTL 592


>gi|126697217|ref|YP_001092103.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166225373|sp|A3PFH7|SYD_PROM0 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|126544260|gb|ABO18502.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 598

 Score =  568 bits (1465), Expect = e-160,   Method: Composition-based stats.
 Identities = 219/599 (36%), Positives = 342/599 (57%), Gaps = 16/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R   C +L  +D+G  V L GWV R R HGG+IF+D+RDH G  Q+  NPD     F+ A
Sbjct: 2   RNKICKELNNTDIGKLVNLCGWVDRRRDHGGVIFIDLRDHSGFLQITINPDDGAALFKQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
           +++R+E V+ + G++  R  ++IN N+ TG++EL  + ++IL+        P+ +     
Sbjct: 62  ETLRNETVIMVSGIINERPKDSINTNLSTGELELKVKDLQILNQIKKNLPFPVSIHDYEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLRR  L +N+  R +II   R  +    F E  TP+LT S+PEGARD
Sbjct: 122 TKEELRLKYRYLDLRRGKLLENLKTRHKIIKVAREFLDNFGFTEVETPLLTKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP+R++ G F+ALPQ+PQ +KQLLM  G D+Y+QIA CFRDED R+DR P EF QLD+
Sbjct: 182 FLVPARLSNGEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ +++I++  E++++ +++E  N     N F R+ + +A+  YGTD+PD R  +++
Sbjct: 241 EMSFISEEEIISFNESLIKKIWKEVLNIKFN-NAFPRMSWQEAMDNYGTDRPDTRYQMLL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
            ++        F +F+K +      +   +       +         + + A+  G  GL
Sbjct: 300 KDLGGILGDIGFNIFTKAIKSGGYIKSITVKGGNSSISNVRIKPGGDIFQVAKDAGAGGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  + DE   +  +G +  +L+  +   I    + +DGD     AGD L         
Sbjct: 360 AFIRVKGDE---LETIGAIKNNLSEEHIADILKITEAKDGDLILLGAGDKLIVNQSLDRV 416

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG---GMESLKGND 473
           R +IA++L +I+ + + F W+ DFP +E NEEE + +  H+PF  P+            +
Sbjct: 417 RQYIAKDLNLIDKSKWNFLWVTDFPMFERNEEENRYEALHHPFCSPKNIKSKDSENLKKE 476

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           + S  A  YDLV NG E+  G +R H + +  +    VG++ + ++ +FG L  A + G 
Sbjct: 477 IESSTANAYDLVLNGLELGGGSLRIHEANLQREVLKMVGLTDKEIDEKFGFLIEALEMGA 536

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           PPHGGIA G+DRI ML++G  ++RE   FP +Q    LL  +PS VS  QL+EL + I 
Sbjct: 537 PPHGGIAFGLDRITMLIIGTDSIRETIAFPKNQQAKCLLTNAPSNVSESQLKELDIEIT 595


>gi|312199922|ref|YP_004019983.1| aspartyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311231258|gb|ADP84113.1| aspartyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 597

 Score =  568 bits (1464), Expect = e-160,   Method: Composition-based stats.
 Identities = 226/591 (38%), Positives = 329/591 (55%), Gaps = 23/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63
           R+H CGD  ++D G  V + GWV   R HG  + F+D+RD+ G+ Q V +          
Sbjct: 21  RSHRCGDPRLADAGETVTVCGWVAHRRQHGQSLQFIDLRDYSGVIQCVVDGTV------- 73

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122
            VRSE+VL I GLV  R   T+N  + TGQ+EL   K+E+LSVA+  P P+    +   E
Sbjct: 74  DVRSEYVLKITGLVTERPEGTVNEALATGQVELRDCKVEVLSVAKPPPFPLDDRADNVDE 133

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S R  +R+LDLRR+ + +N+  R+ ++ ++R  +    F+E  TP+L  S+PEGAR+F+V
Sbjct: 134 STRLTFRYLDLRRERMQRNLRIRSTVLAAIRTALSPLGFVEVETPLLMPSTPEGAREFIV 193

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   GSFYALPQ+PQ +KQLLM  G DRYFQ A C RDED R+DR   EF QLD+EMS
Sbjct: 194 PSRQFPGSFYALPQSPQLFKQLLMVGGADRYFQFARCLRDEDLRADRQ-YEFTQLDLEMS 252

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+Q D+L+ + + +    E  + G         + +  A+ RYG DKPDLR  + +  +
Sbjct: 253 FVDQQDVLDVITSAVLAATEAITGGPVPPVET--MTWQHAMDRYGVDKPDLRFGMELVEL 310

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE F  S F+ F+ +       +   +P      NR   D + + A+  G  GL ++  R
Sbjct: 311 TEVFAGSGFKAFAGV----GAVKGIRVPGGSASHNRKALDTLTDTAKKLGAKGLVWM--R 364

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           +  +G +    PVAK L+      I  + + ++GD    +A +    C      RN + +
Sbjct: 365 VGAAGALE--SPVAKFLSEAELAGIVEKTEAREGDLLLLVADEWTTACEVLGQLRNSLGR 422

Query: 423 ELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
                    F F W++DFP +   ++E  +    H+PFT P          + L +++  
Sbjct: 423 PP--AGEGGFRFVWVVDFPQFVGIDKETGRPKPGHHPFTRPHPDDLDKLETEPLQVRSRA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+ SG IR H  E+  + F  +GIS+E  + RFG     F  G PPHGG A 
Sbjct: 481 YDLVLNGWELGSGSIRIHEPELQQRIFDLIGISREEADRRFGFFLTPFGYGAPPHGGFAF 540

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR+V  L G +N+REV  FP +Q+  D L G+P+ V   QL+ELG+R+V
Sbjct: 541 GIDRLVASLAGEENIREVIAFPKTQSGLDPLTGAPTRVDERQLKELGVRVV 591


>gi|292559399|gb|ADE32400.1| putative AspRS [Streptococcus suis GZ1]
          Length = 553

 Score =  568 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 225/563 (39%), Positives = 333/563 (59%), Gaps = 17/563 (3%)

Query: 33  HGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCIDGLVMSRSAETINANI 89
            GG+IF+D+RD  GI Q+V NP+S   E+   A+S+RSE+V+ + G V+ R  E  N NI
Sbjct: 1   MGGLIFIDLRDREGIMQLVINPESVEAEVMAKAESLRSEFVIEVTGTVVER--EQANDNI 58

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRII 149
            TG +EL    + +L+ A+  P  +    E  +  R +YR+LDLRR  +  N   R  + 
Sbjct: 59  PTGAVELQVTSLTVLNTAKTTPFEIKDGIEASDDTRLRYRYLDLRRPEMLNNFKLRAAVT 118

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
           +S+R  +    FI+  TP+LT S+PEGARD+LVPSRV++G FYALPQ+PQ  KQLLM +G
Sbjct: 119 HSIRNYLDDLEFIDVETPMLTKSTPEGARDYLVPSRVSKGHFYALPQSPQITKQLLMNAG 178

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
           FDRY+QI  CFRDED R DR P EF Q+D+E SF+ + +I + +E ++  V ++    + 
Sbjct: 179 FDRYYQIVKCFRDEDLRGDRQP-EFTQVDLETSFLNEVEIQDIVEGLIAKVLKDTKGID- 236

Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
           V+  F R+ YD A+  YG+DKPD R  +++ ++TE     +F+VFS+     P  +   +
Sbjct: 237 VTLPFPRMAYDHAMNFYGSDKPDTRFEMLLQDLTELVKEVDFKVFSEA----PVVKAIVV 292

Query: 330 PAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV 389
                  +R   D++ ++A+  G  GLA++     + G +A  GPVAK L  + TE +  
Sbjct: 293 KGAADSYSRKDIDKLTDYAKQFGAKGLAWVKV---DKGELA--GPVAKFLTGI-TEKLTA 346

Query: 390 RLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE 449
            L ++D D   F+A +     +     RN +A+E G+I+ + F F WI+D+P +EW+EEE
Sbjct: 347 SLQLEDKDLVLFVADELEVANNTLGALRNRLAKEQGLIDESKFNFLWIVDWPMFEWSEEE 406

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
            +   AH+PFT+P          DL  ++A  YD+V NG+E+  G +R +  ++  Q F 
Sbjct: 407 GRYMSAHHPFTLPTEETAHHLDGDLAQVRAVAYDIVLNGYELGGGSLRINQKDMQEQMFK 466

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G S E    +FG L  A   G PPHGG+A G+DR VMLL G  N+REV  FP +    
Sbjct: 467 ALGFSAEDAHEQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGEDNIREVIAFPKNNKAS 526

Query: 570 DLLMGSPSTVSVEQLRELGLRIV 592
           D +  +PSTV+  QL EL L I 
Sbjct: 527 DPMTQAPSTVASAQLEELALDIT 549


>gi|282892399|ref|ZP_06300749.1| hypothetical protein pah_c253o018 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281497801|gb|EFB40162.1| hypothetical protein pah_c253o018 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 581

 Score =  568 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 221/587 (37%), Positives = 335/587 (57%), Gaps = 11/587 (1%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWV 70
              D G+ V LSGWVHR R HGG+IF+D+RD YG+TQ+V +P++      +++ +RSEWV
Sbjct: 2   RQEDTGTSVILSGWVHRRRDHGGLIFIDLRDRYGLTQLVFDPETNAAAHAVSEKLRSEWV 61

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYR 129
           + I G V+ R+ +  N  + TG IE+    IE+LS A+  P  +  E  E  E +R KYR
Sbjct: 62  ISIQGHVIERTLDMKNPKLATGDIEVVVDHIEVLSTAKTPPFSICDESIEVHEELRLKYR 121

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           +LD+RR  + + ++ R + + + R  +    F+E STPIL  S+PEGARD+LVPSRV+ G
Sbjct: 122 YLDIRRGDVAEKLIVRHKAMLTTRNYLSQRGFLEISTPILGKSTPEGARDYLVPSRVHPG 181

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           SFYALPQ+PQ +KQLLM +G DRYFQIAPCFRDED R+DR P EF Q+D+EMSF   D +
Sbjct: 182 SFYALPQSPQIFKQLLMVAGMDRYFQIAPCFRDEDLRADRQP-EFTQIDLEMSFATPDIL 240

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           +  +E +++ +F+E  +    S+ F  + +   + +YG D+PD+R  + +  + +    S
Sbjct: 241 IPIIEGLIQTLFKECCSIEIPSS-FETLSHAICMEKYGCDRPDMRFEMTLSTLDDIVAGS 299

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
            F VF   L      +   +   G    R   +   E+    G  GLA++  +       
Sbjct: 300 SFSVFLDQLREGGTVKGICVK-GGSDITRKGIETYTEFVGRFGINGLAWMKMQ-----EG 353

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
                + K       + +  RL +++GD  F +A             R  IA++  +I  
Sbjct: 354 TLTSNIVKFFTPEQQQQLIERLQVENGDLIFMVADQKSSTNQALDHLRRRIAKDRNLIPS 413

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
           N + F W+ DFP + WN +E++++  H+PFT P      L  +D L +++  YDLV NG+
Sbjct: 414 NTYRFLWVRDFPLFNWNPDEQRLESEHHPFTSPLPEDLHLLDSDPLKMRSSGYDLVLNGY 473

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G  R H SE+  + F  + ++ E ++ +FG    A   G PPH G+A G+DR+VML
Sbjct: 474 EVGGGSQRIHSSELQQKIFEKLKLTPEELKTKFGFFLEALSFGTPPHLGLALGLDRLVML 533

Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           L G  N+R+V  FP +Q   DL++  PS V  +QL ELG+ + E  K
Sbjct: 534 LTGTDNIRDVIAFPKTQKASDLMLECPSLVVKKQLHELGISVEEEKK 580


>gi|94676957|ref|YP_588764.1| aspartyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|123384132|sp|Q1LTF0|SYD_BAUCH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|94220107|gb|ABF14266.1| aspartyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 589

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 209/593 (35%), Positives = 327/593 (55%), Gaps = 7/593 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           RT  CG L  S +G  V L GWV+R R  G +IF+++ D  G  QVV +    + F  A 
Sbjct: 2   RTIYCGQLNKSHLGQEVILCGWVYRYRNLGRLIFIELSDREGRVQVVFDLTHPSIFSNAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+++ + + G+V +R  + IN NI TG+IE+ A  + IL+ ++ LPL +       E 
Sbjct: 62  KLRNDFCIQLHGIVRTRLDKQINYNITTGEIEVLATNLTILNSSQPLPLDINFHNN--EE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLR   + + +  R +I + +R  M  + F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKFRYLDLRNPEMAQRLKLRAKITSLVRHFMEKKGFLDIETPMLTKTTPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGQFYALPQSPQLFKQLLMISGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVEASF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + I   ME+++R ++ E         NF  + Y  A+ R+G+DKPDLRNPI + +V 
Sbjct: 239 INAEQICKIMEDLVRHLWREI--QEVELENFQYMSYTAAMYRFGSDKPDLRNPIEIVDVV 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +   ++   + + I        V      G   +     +  ++ ++ G   + ++    
Sbjct: 297 DLVKNTTCTILADIAKDIKNRVVALRVPNGAKLSLNDIKKYEKYIQTYGIKFIIWMKVYQ 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G       + K+L   +  +I  R    DGD  FF AG+     +     R  +  +
Sbjct: 357 GKDGVKTTQSSITKYLLPEDIMSIIERTGACDGDILFFAAGNNNIINNVMGALRIKLGCD 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +   N +   WI+DFP +E + +E  +   H+PFT P+           L  KA  YD
Sbjct: 417 LKLNRENSWAPLWIVDFPMFEKD-DEGNLHAVHHPFTAPKNIDIPTLLQYPLKAKANAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+ SG +R H +E+    FS +G+++    ++FG    A + G PPH G A G+
Sbjct: 476 MVINGYEVGSGSVRIHCAELQQTIFSILGMTRNEQSSKFGFFIDALKYGAPPHAGFAFGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR+VMLL   +N+R+V  FP +    DL+  +PS  +   L+EL + I++  K
Sbjct: 536 DRLVMLLTSTENIRDVIAFPKTTTAIDLMTEAPSIGNTIALKELSIEILDKNK 588


>gi|268679293|ref|YP_003303724.1| aspartyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617324|gb|ACZ11689.1| aspartyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 582

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 229/596 (38%), Positives = 345/596 (57%), Gaps = 19/596 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           R+H C DL V+++G  V + GW +  R HGG+IF+D+RD  G+ Q+V +P+      EIA
Sbjct: 2   RSHYCTDLDVANIGEIVEVCGWANSHRDHGGVIFIDLRDKSGLVQLVCDPEDSTKAHEIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+R E+VL   G V +R     N  + TG+IE+   ++ + + +E +P  V G+    E
Sbjct: 62  SSIRDEFVLKAKGRVRARGEGLENPRLKTGKIEIVVDELIVENASETVPF-VIGDNNVGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR    ++    R++   ++R  + A+ F+E  TPILT S+PEGARD+LV
Sbjct: 121 DVRLKYRYLDLRNAKAYEIFKLRSKATVAVRNSLDAQGFLEVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM +GFDRYFQ+A CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHNGEFYALPQSPQLFKQLLMCAGFDRYFQVAKCFRDEDLRADRQP-EFTQIDIEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+D++   EN+LR VF+       +S  F RI + +A+ +YG+DKPDLR  + M +V
Sbjct: 240 FCNQEDVMKVTENLLRDVFKACG--YEISIPFNRIRFKEAMEKYGSDKPDLRYDLSMIDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F + +  +FS I        + A+    G    ++       E+ R  G  GL Y  
Sbjct: 298 IDIFANCKNEIFSNIAKDTKKNRIKALKVPNGDNIFSKRQMQSFEEYVRKFGAQGLGYFQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K     + + I    D+  GD+ FF AG+      +    R  +
Sbjct: 358 MKED-----GLKGPLTKFFEESDLQKIVDAADLHVGDAIFFGAGEKKVVLDYMGRFRIFL 412

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+++ II  + FEF W++DF  +E   E  K+   H+PFTMP+     +    +  +++ 
Sbjct: 413 AEQMNIIPKDVFEFVWVVDFEMFEV--ENGKVKALHHPFTMPK----DIDNTPIDEMESI 466

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG E+  G IR H  E+  + F  +GI  E    +F  L  A + G PPHGG+A
Sbjct: 467 AYDIVLNGVELGGGSIRIHKKEIQQKVFKLLGIDDEEAHEKFEFLLDALKYGAPPHGGLA 526

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ML+  ++++R+V  FP +Q    LL  +PS V  +QLR+LG+R+ E  K
Sbjct: 527 IGLDRMMMLITKSESIRDVIAFPKTQKAQCLLTRAPSEVESDQLRDLGIRLREKSK 582


>gi|149917881|ref|ZP_01906376.1| aspartyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149821401|gb|EDM80803.1| aspartyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 612

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 227/602 (37%), Positives = 338/602 (56%), Gaps = 21/602 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIA 62
           RTH+CGDL +SD G  V L GWV+  R HGG IF+D+RD  G+TQVV   + D+A  E  
Sbjct: 9   RTHTCGDLRLSDEGREVILFGWVNFRRDHGGRIFIDLRDREGLTQVVFGPDVDAAAHEAG 68

Query: 63  KSVRSEWVLCIDGLVMSRSA--ETINANIITGQIELSAQKIEILSVAEELPLPVFGER-- 118
            ++RSE  + + G V+SR       N N+ TG+IE+   ++E+ S A+  P  V  +   
Sbjct: 69  GALRSEDCIGVAGKVVSRVKNQGQANPNLATGEIEVEVTRLEVFSKAQTPPFDVSKDDRL 128

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E++R +YR+LDLRR +L +N + R+++    R  M  + F+E  TP +   +P GAR
Sbjct: 129 DTNENLRLQYRYLDLRRPSLQRNFILRSKVGTLTRTHMAGQGFLELETPYMVKYTPGGAR 188

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVPSR+N G+FYAL ++PQ +KQL M SGFD+YFQI  CFRDED R+DR P EF Q+D
Sbjct: 189 NFLVPSRLNPGTFYALAESPQIFKQLFMVSGFDKYFQITRCFRDEDLRNDRQP-EFTQID 247

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E+SF   + +   +E ++R ++ E  +   ++ +F R+ + +A+ RYG+DKPD R  + 
Sbjct: 248 VELSFATPERVFEPIEALMRKLWGELLD-TQLAESFPRMTWAEAMDRYGSDKPDTRFGLE 306

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ---GQPG 355
             ++TE      F VF K   V     +      G G  R   D++  +A+ +   G  G
Sbjct: 307 FTDLTEKTRGCGFAVFEKAEYVKG---ICLPGEHGKGYGRGKIDKLTAFAKKRESGGAKG 363

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LA+   R++  G     G  AK +     + I   +   +G    FIA D     +    
Sbjct: 364 LAW--SRVEADG--TWKGGSAKFIAPELQKQISADMGADEGSLLLFIADDFHTTHAVLNS 419

Query: 416 ARNHIAQELGIINCNC--FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            R H+   LG+++     + F W+ DFP +E N  E     +H+PFT P+     L  +D
Sbjct: 420 IRLHLRDALGLVDPKAKQWNFLWVTDFPLFEKN-GEGNWTSSHHPFTCPKDEHVELLLSD 478

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              + A  YDLV NG E+  G IR H S+V  + F  +G+ +E  E +FG L  AF+ G 
Sbjct: 479 PGKVLAKAYDLVLNGNEVGGGSIRIHRSDVQAKVFEALGLGEEEREQKFGFLLDAFKYGP 538

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR+ ML+ GA+++R+V  FP +Q   DL+   P+     QL EL +R   
Sbjct: 539 PPHGGIALGLDRLAMLMSGAESLRDVIAFPKTQKGQDLMTHCPTPADDAQLAELFIRHRP 598

Query: 594 NP 595
            P
Sbjct: 599 LP 600


>gi|291543723|emb|CBL16832.1| aspartyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 587

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 216/594 (36%), Positives = 321/594 (54%), Gaps = 13/594 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RTH CG++  S +G+   + G+V +VR  G ++F+D+RD  G+ Q+  N       F  
Sbjct: 5   KRTHFCGEV--SQIGTEAVVCGFVQKVRNLGTLLFIDLRDRTGVVQLAFNETQQPELFAK 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A++ R E+VL   G V  R  E+IN ++  G +EL    + IL+ A+  P  +  + +  
Sbjct: 63  AETCRGEYVLMAHGTVKER--ESINHDMKNGNVELVVDDLRILNKAQTPPFEITSDTKVN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  L +N+V R +I  + R    A +FIE  TP++  S+PEGARD+L
Sbjct: 121 EELRLKYRYLDLRRAPLQRNLVMRHQIAKAAREYFYANDFIEIETPMMMKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           +PSRV+ G FYALPQ+PQ YKQLLM +G DRY Q+A CFRDED R+DR P EF Q+D+EM
Sbjct: 181 IPSRVHPGKFYALPQSPQIYKQLLMVAGMDRYIQLARCFRDEDLRADRQP-EFTQIDLEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+ +DIL   E  +  VF++            R+ Y +A+ R+G+DKPD R  + + +
Sbjct: 240 SFVDVEDILQMAEGFVHHVFQQVLGREI-PLPLPRLSYAEAMNRFGSDKPDTRYGMEIQD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E+     F VF+  +               G   R   D++ E  +  G  GLA+I W
Sbjct: 299 ISEYVKDCGFGVFTGAIEAGGSVRAIVAKQAAGTLTRKEIDKLTEMVKGIGAKGLAFIRW 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                          K +       I   LD Q GD    +A             R  +A
Sbjct: 359 V-----EEKPSCSFGKFVGEDKLHEILQALDCQQGDVVLIVADKNKVTLPVLGALRQTVA 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +I    F F WI   PF+EW+E+       H+PFTMP+        +    + A  
Sbjct: 414 RKLDLIPEGQFNFLWITQMPFFEWDEDNNCWMAMHHPFTMPEDDCLQYLDSAPEKVIAKA 473

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DLV NG E++SG IR    E+  + F  +G++ E +E +FG L  A++ G PPHGG+  
Sbjct: 474 FDLVLNGTELSSGSIRITNYELQQKMFQALGLTDEEIEAKFGFLVEAYRFGAPPHGGMGI 533

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           G+DR+ M++LG  ++R+V+ FP  QN  +L+   PS V  E L  LG+ + E  
Sbjct: 534 GLDRLAMVMLGVDSLRDVTAFPKVQNASELMSACPSAVDKENLDILGIAVTETE 587


>gi|15618572|ref|NP_224858.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15836194|ref|NP_300718.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752378|ref|NP_444637.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33242019|ref|NP_876960.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|6919974|sp|Q9Z7P2|SYD_CHLPN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|4376961|gb|AAD18801.1| Aspartyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189021|gb|AAF37971.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8979034|dbj|BAA98869.1| aspartyl tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|33236529|gb|AAP98617.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 584

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 227/593 (38%), Positives = 335/593 (56%), Gaps = 14/593 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
           +YRTH C +L  + +G  V+L+GWVHR R HGG++F+D+RD +GITQ+V   D      +
Sbjct: 2   KYRTHRCNELTSNHIGENVQLAGWVHRYRNHGGVVFIDLRDRFGITQIVCREDEQPELHQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGERE 119
              +VRSEWVL + G V  R A   N N+ TG IE+     E+LS ++ LP  +      
Sbjct: 62  RLDAVRSEWVLSVRGKVCPRLAGMENPNLATGHIEVEVASFEVLSKSQNLPFSIADDHIN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LD+RR  + + ++ R +++ + R  M A+ F E  TP+L  S+PEGARD
Sbjct: 122 VNEELRLEYRYLDMRRGDIIEKLLCRHQVMLACRNFMDAQGFTEIVTPVLGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  G FYALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D+
Sbjct: 182 YLVPSRIYPGKFYALPQSPQLFKQLLMVGGLDRYFQIATCFRDEDLRADRQP-EFAQIDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF +  D+L  +E ++  +F   + G  +     ++ Y +A   YGTDKPDLR  + +
Sbjct: 241 EMSFGDTQDLLPIIEQLVATLFA--TQGIEIPLPLAKMTYQEAKDSYGTDKPDLRFDLKL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +  ++   S F +F   L+     + + +P  G   +R   D   E+ +  G  GL +I
Sbjct: 299 KDCRDYAKRSSFSIFLDQLAHGGTIKGFCVP-GGATMSRKQLDGYTEFVKRYGAMGLVWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                 +        +AK ++      +    D +D D    IA             R  
Sbjct: 358 K-----NQEGKVASNIAKFMDEEVFHELFAYFDAKDQDILLLIAAPESVANQSLDHLRRL 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+E  + + N + F WI DFP +    E+ KI   H+PFT P      L   D L++++
Sbjct: 413 IAKERELYSDNQYNFVWITDFPLFSL--EDGKIVAEHHPFTAPLEEDIPLLETDPLAVRS 470

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+EIASG  R H  ++  Q F+ + IS E ++ +FG   +A   G PPH GI
Sbjct: 471 SSYDLVLNGYEIASGSQRIHNPDLQSQIFTILKISPESIQEKFGFFIKALSFGTPPHLGI 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VM+L  A+++REV  FP +Q   DL+M +PS +   QL+EL +++ 
Sbjct: 531 ALGLDRLVMVLTAAESIREVIAFPKTQKASDLMMNAPSEIMSSQLKELSIKVA 583


>gi|62184723|ref|YP_219508.1| aspartyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81313092|sp|Q5L734|SYD_CHLAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62147790|emb|CAH63536.1| putative aspartyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 584

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 236/594 (39%), Positives = 334/594 (56%), Gaps = 14/594 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
           +YRTH C +L +S+VG  VRLSGWVHR R HGG++F+D+RD +GITQ+V   D      +
Sbjct: 2   KYRTHRCNELSLSNVGERVRLSGWVHRYRNHGGVVFIDLRDRFGITQIVCREDEKPELHQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGERE 119
           +  SVRSEWVL I+G V  R     NAN+ TG+IE+  +K++ILS A+            
Sbjct: 62  LVDSVRSEWVLSIEGTVCRRLEGMENANLATGEIEVDIEKVDILSKAKNLPFSISDDHIH 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LD+RR  +   +V R +++ + R  M  + F E  TPIL  S+PEGARD
Sbjct: 122 VNEELRLEYRYLDMRRGQILDRLVHRHKVMMACRQYMDKQGFTEVVTPILGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  GSFYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+D+
Sbjct: 182 YLVPSRIYPGSFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFAQIDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF   +D+   +E ++  +F     G  +     R+ Y +A   YGTDKPDLR  + +
Sbjct: 241 EMSFGTPNDLFPIIEQLVVEMFA--VQGIKIDLPLPRMTYQEAKDLYGTDKPDLRFGLQL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           H+  EH     F +F   L+     + + +P  G   +R   D   E+ +  G  GL +I
Sbjct: 299 HDCREHAKEFSFSIFLDQLAQGGTIKGFCVP-GGADMSRKQLDVYTEFVKRYGAMGLVWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                          VAK  +    +A+      Q+ D    IA             R  
Sbjct: 358 K-----KQESGIASNVAKFASEAVFQAMFADFGAQNNDILLLIAAPEDVANQSLDHLRRL 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+E    N   + F WI DFP +   +E+ KI   H+PFT P      L   D LS+++
Sbjct: 413 IAKERNFYNEAQYNFVWITDFPLF--AKEDGKICSEHHPFTSPLDEDIPLLDKDPLSVRS 470

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+EIASG  R H +++  + FS + +S E ++ +F     A   G PPH GI
Sbjct: 471 SSYDLVLNGYEIASGSQRIHNADLQNKIFSILELSPESIKEKFDFFIDALSFGTPPHLGI 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DRI+M+L GA+ +REV  FP +Q   DL+M +P+ +   QL+EL +++  
Sbjct: 531 ALGLDRIMMVLTGAEGIREVIAFPKTQKAADLMMDAPAEIMTSQLKELSIKVTS 584


>gi|310287208|ref|YP_003938466.1| Aspartyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309251144|gb|ADO52892.1| Aspartyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 598

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 223/609 (36%), Positives = 334/609 (54%), Gaps = 33/609 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V L+GWV R R HGG+ F+D+RD+ G+ Q+V        E+A+
Sbjct: 6   YRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDNTGLVQIVI----YDEEMAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFG 116
            +RSE+V+ + G V  R     N ++ TG+IE+  + I++L+ ++ LP            
Sbjct: 62  PLRSEFVIQVTGEVRLRPDGNENTHLATGKIEVVVETIDVLAKSDALPFQVSTALENESE 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEEMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM+FV+Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR  
Sbjct: 241 LDMEMAFVDQEDVMAMAEKVIAAIWK--SAGYDVQLPIQRITWQDAMDKYGSDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +TE+F  + FRVF         Y    +   G    R   D   EWA+ +G  GL
Sbjct: 299 NPLVELTEYFKDTPFRVFQA------DYVGAVVFKGGAATPRRQFDAWQEWAKQRGAKGL 352

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E G +   GPVAK+L+    E +   +  + GD+ FF AG            
Sbjct: 353 AYVSF--TEDGELK--GPVAKNLSDSEREGLMAAVGAESGDAVFFAAGSRESSQLLLGAV 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A+  G+++   F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 409 RVELARRAGLLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H   +  +  + +GI+ E  + +FG L  
Sbjct: 469 DKFDQDPEHAMSDSYDIVCNGEEMGGGSVRIHRDGIQDRVLNVLGIAPEEAKEKFGFLLD 528

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH GIA G DR V +L GA  +R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 529 AFKFGAPPHAGIALGWDRTVSILAGADTIRDVIAFPKAGGGRDPLTGAPAPISDEQRAET 588

Query: 588 GLRIVENPK 596
           G+    + +
Sbjct: 589 GVDYDPDAE 597


>gi|325130764|gb|EGC53499.1| aspartyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 586

 Score =  567 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 221/591 (37%), Positives = 335/591 (56%), Gaps = 25/591 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2   RTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S R+E+VL I G V +R   T N  +I+G+IE+ A++IE+L+ A   P  +  E    E+
Sbjct: 62  SARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVLNAAATPPFQIDDE-NISEN 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R   R +DLRR  + +N+  R ++   +R  + A+ FI+  TP+LT S+PEGARD+LVP
Sbjct: 121 VRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV+ G F+ALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +D+I++  E + + VF++  N +    +F R+ Y +A+  YG+DKPD+R  +    +T
Sbjct: 240 LNEDEIMDITEGMAKQVFKDALNVD--LGDFPRMPYAEAMFYYGSDKPDMRINLKFTELT 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF+VF     +  G  V      G   +R   D   ++    G  GLAYI  ++
Sbjct: 298 DLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KV 355

Query: 364 DESGNVAG------MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++ GN++         P+ K L+    + I  R   Q+GD  FF A             R
Sbjct: 356 NDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQNGDIIFFGADKTKVVNEAIGALR 415

Query: 418 NHIAQELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  E G  N    + ++  W++DFP +E++EE  +    H+PFT P+ G E L  +D 
Sbjct: 416 IKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDP 475

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +  A  YD+V NG+EI  G IR H ++V  + F+ + IS E  + +FG L    + G P
Sbjct: 476 ANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVFAALKISPEEQQEKFGFLLDNLKFGAP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNV--REVSLFPMSQNFCDLLMGSPSTVSVEQ 583
           PHGG+A G+DR+V L+ GA++   R+    P +      +   P+    +Q
Sbjct: 536 PHGGLAFGLDRLVTLMTGAESYPRRDCL--PENT--TCPM---PADQRAQQ 579


>gi|269119759|ref|YP_003307936.1| aspartyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268613637|gb|ACZ08005.1| aspartyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 597

 Score =  567 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 222/583 (38%), Positives = 338/583 (57%), Gaps = 13/583 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACF 59
            YRTH+ G L + + G  V LSGWV  VR     +FL +RD  GITQV+ + +      F
Sbjct: 1   MYRTHNLGQLRIENAGEEVVLSGWVANVRDMNHFLFLVLRDREGITQVIIDKENSPEGLF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-R 118
           E  K++ +E V+ + G V  RS++  N ++ TG IE++A  ++ILS + +LP  +     
Sbjct: 61  EKVKALNNEDVVRVTGTVRERSSK--NKDMPTGDIEVAADTVDILSRSLQLPFAINDNIT 118

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R KYR+LDLRR  +  N+ KR  ++ ++R  +  + F++  TP+L  ++PEGAR
Sbjct: 119 NLSEDMRLKYRYLDLRRTKMLNNLKKRNTMLKAIRDYLTDKGFLDIDTPVLAKATPEGAR 178

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DF+VPSR+N+G FYALPQ+PQ +KQ+LM +G D+Y+Q+A CFRDED R+DR P EF QLD
Sbjct: 179 DFIVPSRINKGDFYALPQSPQLFKQILMVAGVDKYYQLAKCFRDEDLRADRQP-EFTQLD 237

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV Q+DIL  ME + + VFE+ +       +F R+ Y +A+ RYG+DKPD R  + 
Sbjct: 238 IEMSFVTQEDILCEMEKMAKKVFEKVTGKK-ADYDFPRMDYYEAMDRYGSDKPDTRFGLE 296

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLA 357
           + ++TE   +S F+ F+         +   +P      +R +   +  + ++     GLA
Sbjct: 297 LIDITEEVRNSGFKAFAGAAESGGSIKAIVVPGNLEKFSRKYIGDLENYVKTYYKAKGLA 356

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +I  R+DE  N   + P+AK  +     AI  +L+++ G     IA       +     R
Sbjct: 357 HI--RIDE--NNETVSPIAKFFSEAELSAITGKLELKAGSIALIIADTKDVTNNALGALR 412

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  EL  IN     F W++DFP +EW+EEE++    H+PFT  +   +     +L  I
Sbjct: 413 LKVGNELDFINEEQDNFLWVIDFPMFEWSEEEERYKSTHHPFTAIKEEDKEFLNKNLEKI 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +   YD+V NG+EI  G IR H SE+    F  +G+SKE  E +FG    A + G+PPHG
Sbjct: 473 RTLSYDMVLNGYEIGGGSIRIHDSELQDVIFEKLGLSKEEAEEKFGFFLNALRYGVPPHG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
           GIA G+DR +M +L   +++EV  FP +    DL+M +P+ V 
Sbjct: 533 GIAFGVDRWLMAMLKEDSIKEVIPFPKTNKGQDLMMEAPAAVD 575


>gi|189501606|ref|YP_001957323.1| aspartyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|238692323|sp|B3EUH5|SYD_AMOA5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189497047|gb|ACE05594.1| aspartyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
          Length = 582

 Score =  567 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 217/595 (36%), Positives = 332/595 (55%), Gaps = 21/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L +  +G  V L GWV ++R  G ++++D+RD YGITQ++        EI   
Sbjct: 3   RTHTCGELRLQHIGISVTLCGWVQKIRNKGSLVWIDLRDRYGITQLILEEHITAPEILSQ 62

Query: 65  VRSE---WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           V+     +V+   G V+ RSA+  N ++ TG IE+  + + IL+ A+  P  +  + +  
Sbjct: 63  VQHIGREYVIQATGSVIERSAK--NPSMPTGDIEIEVKSLTILNTAKTPPFLIEEQTDGG 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +YR+LDLRR  L KN++ R  +    R  +   +F++  TP+L  S+P GARDF+
Sbjct: 121 EELRMQYRYLDLRRPPLQKNLLLRQLVAQHARAYLEQHHFVDVETPLLIKSTPGGARDFV 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++   FYALPQ+PQ +KQLLM +G DRY+QIA CFRDED R+DR P EF Q+D E+
Sbjct: 181 VPSRIHPQQFYALPQSPQIFKQLLMVAGLDRYYQIAKCFRDEDFRADRQP-EFTQIDCEL 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV Q DIL+  EN  + +FE  +      + F  I Y +A+++YGTDKPD+R  + +  
Sbjct: 240 SFVTQADILHIFENFTKYIFE--ATIQVRLDKFPCITYAEAMQKYGTDKPDIRFGMRLIE 297

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQG--QPGLAY 358
           +TE   +SEF +F +   +        I  KG     R   D + E+ +       GL Y
Sbjct: 298 LTELVKNSEFPLFKQAKLI------AGICVKGCADYTRKQLDDLTEYIKKLNLVTSGLVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           + +  D S N     PV+K  ++        ++    GD    +AG+           R 
Sbjct: 352 VKYLADGSFN----SPVSKFYDVEQLTLWAKQMHAVPGDLLLILAGEIEATQIALGSLRL 407

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  EL +++ + F   W++DFP  EWNEE ++    H+PFT P+     L      +++
Sbjct: 408 KLRDELHLVSKDKFAPLWVVDFPLLEWNEESQRYVSRHHPFTSPKQEDIELLSTKPETVR 467

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG EI  G IR H   +  Q F+ +G S+E    +FG L  AF+ G PPHGG
Sbjct: 468 ANAYDLVINGMEIGGGSIRIHDRALQEQIFNVLGFSEEEARQQFGFLTDAFEYGAPPHGG 527

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           IA G DR+  ++    ++R    FP +    D++M +PST++ +Q+ ELG+ + +
Sbjct: 528 IAFGFDRLCAIIGREDSIRPFIAFPKNNAGRDVMMKAPSTITEQQISELGIILSK 582


>gi|218461682|ref|ZP_03501773.1| aspartyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 499

 Score =  567 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 328/501 (65%), Positives = 412/501 (82%), Gaps = 2/501 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYR+H+C  L  +DVGS VR+SGWVHRVR HGG++F+D+RDHYGITQVVA+PDS  F+
Sbjct: 1   MHRYRSHTCAALRKTDVGSTVRISGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A++VR EWV+ IDGLV +R+ +T+N  + TG+IEL AQ+IE+LS A+ELPLPVFGE +Y
Sbjct: 61  LAETVRGEWVIRIDGLVKARTEDTVNKTMATGEIELYAQEIEVLSAAKELPLPVFGEPDY 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE +R KYRFLDLRR+TLH+NIVKRT +I++MR  M A  F E +TPILTASSPEGARDF
Sbjct: 121 PEDVRLKYRFLDLRRETLHRNIVKRTLVISAMRREMGAVGFTEYTTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR++ G+FYALPQAPQQYKQLLM +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+E
Sbjct: 181 LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+D+ NTM  ++  +FEEF+ G  V+  + RI YD+AIR+YGTDKPDLRNPI+M 
Sbjct: 241 MSFVTQEDVWNTMGPLMTQIFEEFAEGKPVTKEWPRIPYDEAIRKYGTDKPDLRNPIVME 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            VT+HF  S F+VF+ +++ NP  ++WAIPAK GG +RAFCDRMN WA+SQGQPGL YIF
Sbjct: 301 AVTDHFAGSGFKVFAGMIASNPKVQIWAIPAKTGG-SRAFCDRMNAWAQSQGQPGLGYIF 359

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           WR  E+  + G GP+AK++    TEAIR +L + DGD+CFF+AG+P KF  FA +AR   
Sbjct: 360 WR-SENDKLEGAGPLAKNIGEERTEAIRTQLGLGDGDACFFVAGEPEKFYKFAGEARTKA 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            +EL +++ + FE CWI+DFPF+EWN+EEKK+DFAHNPF+MPQGG+++L+  D L+IKAF
Sbjct: 419 GEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQGGLDALQNQDPLTIKAF 478

Query: 481 QYDLVCNGFEIASGGIRNHMS 501
           QYD VCNGFEIASG IRN   
Sbjct: 479 QYDAVCNGFEIASGSIRNQSP 499


>gi|283783249|ref|YP_003374003.1| aspartate--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441361|gb|ADB13827.1| aspartate--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 598

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 220/610 (36%), Positives = 334/610 (54%), Gaps = 33/610 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++    VG  V ++GWV R R HGG+ F+D+RD+ G+ QVV        E A+
Sbjct: 6   YRTHHAVEVTEELVGQKVTIAGWVDRRRDHGGVAFVDVRDNTGLVQVVI----YDEETAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFG 116
            +RSE+V+ + G V  R     N ++ TG+IE+ A+ + IL+ ++ LP            
Sbjct: 62  PLRSEFVVQVTGEVRLRPDGNENDHLATGKIEIVAETVTILAKSDALPFQVSTALENESE 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR ++ +N+  R+ +  + R  +   NF E  TP    S+PEG
Sbjct: 122 NKLPSEDVRLKYRYLDLRRPSMQRNLKLRSDMAKAARHALEDMNFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEMSF  Q+D++   E V+  +++E   G+ ++    RI + +A+ +YG+DKPDLR  
Sbjct: 241 LDMEMSFASQEDVMAMAERVIAAIWKE--AGHEITLPLPRITWQEAMDKYGSDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +T++F ++ FRVF         Y    +   G    R   D   +WA+ +G  GL
Sbjct: 299 NPLIELTDYFKNTPFRVFQA------SYVGAVLFKGGAATPRRQFDAWQDWAKQRGAKGL 352

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E G +   GPVAK+L+      ++  +  +DGD+ FF AG            
Sbjct: 353 AYVVF--GEDGELK--GPVAKNLSEEERAGLKEAVGAEDGDAVFFAAGSRESSQLLLGAV 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A   G+++ + F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 409 RVELASRAGLLHPDEFAFTWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSADWI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H  ++  +  + +GI K   + +FG L  
Sbjct: 469 DKFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVLGIDKAEADEKFGFLLE 528

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH GIA G DR   +L GA ++R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 529 AFKYGAPPHAGIALGWDRTAAILAGASSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAET 588

Query: 588 GLRIVENPKK 597
           G+       +
Sbjct: 589 GVDYDPEEDE 598


>gi|310642825|ref|YP_003947583.1| tRNA synthetase class ii (d k and n) [Paenibacillus polymyxa SC2]
 gi|309247775|gb|ADO57342.1| tRNA synthetase class II (D K and N) [Paenibacillus polymyxa SC2]
          Length = 569

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 269/572 (47%), Positives = 378/572 (66%), Gaps = 12/572 (2%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R++GW+  +R  GGI+F+D+RDHYG+TQ+V +  +   +    +  E  + + G V  RS
Sbjct: 2   RIAGWIKNIRNLGGIVFIDLRDHYGVTQIVVSDSNELKDFVSKISRESTISVIGAVCHRS 61

Query: 82  AETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             TI+ ++ TG IE+ A++IE+L      LP  V    E  E +R KYRFLDLR + LH 
Sbjct: 62  ESTISPHMKTGYIEVVAKEIEVLGKVINPLPFEVSSAHEAREDLRLKYRFLDLRNENLHD 121

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           NIV R+R+I S+R +MI  +F+E  TPILT+SSPEGARD+LVPSRV+ G FYALPQAPQQ
Sbjct: 122 NIVLRSRVIQSIRKKMIDLDFLEIQTPILTSSSPEGARDYLVPSRVHPGQFYALPQAPQQ 181

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD+EM+F  Q+D+ N +EN+L  V
Sbjct: 182 FKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLEMAFATQEDVFNVVENMLYEV 241

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
           F EF+N    S  F RI Y +A+ +YG+DKPDLRNP+I+H+VTE F  ++F+VF      
Sbjct: 242 FSEFTNYKI-SKPFSRIPYQEAMLKYGSDKPDLRNPLIIHDVTELFTETDFKVFK----- 295

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
           N    V A P  GG   R+F D +  +A   G  GL++I +  D    ++  G +AK + 
Sbjct: 296 NKTIRVIATPGCGGQ-PRSFYDDIVNFAMEAGAKGLSWIKFNDD----MSLSGSIAKFIP 350

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
                 +        G + FF A +       A   R+ + + L ++  + F+FCWI+DF
Sbjct: 351 EKVKNELMNVTQAGPGYALFFAADELKNVEKIAGAVRSQLGKRLDLLEKDTFKFCWIVDF 410

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +E + +  KI+F+HNPF+MPQGGM++L   + L I A+QYD+VCNG E++SG +RNH 
Sbjct: 411 PMFELDPDTHKIEFSHNPFSMPQGGMDALLNMNPLDILAYQYDIVCNGIELSSGAVRNHD 470

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           +E+M++AF   G + E +++RF  L+ AFQ G PPH GIA GIDRIVM+L    N+REV 
Sbjct: 471 TEIMVKAFEIAGYTYEEIKSRFPALFNAFQFGPPPHAGIAPGIDRIVMILANESNIREVI 530

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            FPM+    D+LMG+PS V+ +QLR++ +++ 
Sbjct: 531 AFPMNSKAQDVLMGAPSEVTDKQLRDVNIKLA 562


>gi|170289122|ref|YP_001739360.1| aspartyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|238688849|sp|B1LBH9|SYD_THESQ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|170176625|gb|ACB09677.1| aspartyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 579

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 239/590 (40%), Positives = 342/590 (57%), Gaps = 15/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L  +D G  V+L GWV R+R  GG+ F+D+RD YG TQ+V + +S  + +   
Sbjct: 3   RTHTCGELRAADEGKKVKLCGWVDRIRDLGGVRFIDLRDRYGETQIVCDVNSKAYSVVDE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E V+ ++G V  R   T N NI TG+IE+ A++IEILS+A+   LP +      E +
Sbjct: 63  LTRESVVLVEGTVRKRPEGTENPNIETGEIEVVAERIEILSLADP--LPFYPGETPKEEM 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR++DLR + + +NI+ R RI   +R       F+E  TP LT S+PEGARDFLVPS
Sbjct: 121 RLKYRYIDLRSERMKRNIILRYRISKIIRDYFDELGFLEIETPFLTKSTPEGARDFLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D+EMSFV
Sbjct: 181 RLRPGKFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQVDVEMSFV 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +D+LN  E ++  VF E S  + +   F RI YD+A+ +YGTDKPD R  + + +   
Sbjct: 240 DVEDVLNVSEGMVSRVFRESSGID-LKVPFDRIPYDEAMEKYGTDKPDRRYGMELRDFGY 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  +EF+V   +L      + + +P      +R   + + E  +  G  GL +      
Sbjct: 299 AFETTEFKVIRNVLDEGGSVKGFIVPGFASEMSRKKGEELMERMKELGLGGLIWFKL--- 355

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHIAQE 423
              +     P  KHL       I    +M +GD C      D           R  I +E
Sbjct: 356 ---DGGITSPHLKHL-EKEFRKIAETENMNEGDVCLIAAHTDRNLLNEALGTLRLEIGKE 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
                   F+  W++DFP++EW+EEE++    H+PFTMP        G+D   ++A  YD
Sbjct: 412 HFSHLAKGFDVLWVVDFPYFEWSEEEERFVARHHPFTMPVLET---LGDDYTKVRAKAYD 468

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG+E+  G IR H  ++  + F  +G+S+E  + +FG    AF+ G+PPHGGIA G+
Sbjct: 469 LVINGYEVGGGSIRIHRRDIQEKIFELLGLSEEEAQKKFGFFLEAFRYGVPPHGGIAFGL 528

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           DR+V ++ G  ++REV  FP + N   LL G+P+ V   QLREL +RI E
Sbjct: 529 DRLVSIIAGESSIREVIAFPKTGNGVCLLTGAPAEVDERQLRELRIRIEE 578


>gi|284044470|ref|YP_003394810.1| aspartyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283948691|gb|ADB51435.1| aspartyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 596

 Score =  566 bits (1458), Expect = e-159,   Method: Composition-based stats.
 Identities = 227/587 (38%), Positives = 334/587 (56%), Gaps = 15/587 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR    G+L  +  G   R++GWVHR R HGG+IF+D+RD  GI Q+V +PD A      
Sbjct: 9   YRDAWAGELTAARAGQPARVAGWVHRRRDHGGLIFIDLRDRSGIVQLVFHPDQAPAAHRA 68

Query: 64  S--VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +  +RSE VL   G V+ R    +N N+ TG+IEL+  ++ +L+ +E  P P+  +    
Sbjct: 69  AHALRSEHVLSAVGEVVRREDGNVNPNLPTGEIELNVAELTVLATSETPPFPIDEDGPVD 128

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R ++R LDLRR  L + +  R +++++MR  +   +F+E  TPILT S+PEGARD+L
Sbjct: 129 ELLRLRHRTLDLRRAPLQEALKLRHQVVHTMRNVLTERDFMEIETPILTRSTPEGARDYL 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R+  G+FYALPQ+PQ +KQLLM  G++RY+QIA CFRDED R+DR P EF QLD+E+
Sbjct: 189 VPARIEPGAFYALPQSPQLFKQLLMIGGYERYYQIARCFRDEDTRADRQP-EFTQLDLEL 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV++DD++ TME+V+  +F   ++       + R+ YD+A+ R+G+D+PD R  + +  
Sbjct: 248 SFVDEDDVIETMESVMGAIFSA-TDFPVAPPAWPRMSYDEALLRFGSDRPDTRFGLEISE 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +   F  +EF+VF+  L+         + A      R   D + E AR  G  GL + F 
Sbjct: 307 LGSLFAGTEFKVFAGALAAGGVVR--GLNAGARELPRRELDALTELARQHGAKGLVWAFV 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           + D         PVAK L+     A+   L+   GD    +A             R  +A
Sbjct: 365 QEDG----TWRSPVAKALSAEEIAAVTGALEASPGDLLLIVADSAAVAAQSLGALRLDLA 420

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   ++  +  +  WI+DFP +E   +       H+PFT P G        D  +++   
Sbjct: 421 ERFSLVPEDRHDILWIVDFPMFEPT-DNGGWTAVHHPFTAPVGD----LDGDPGALRGRG 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV +G EI  G IR +  EV  + F  +G+S E  + RFG L  AF+ G PPHGGIA 
Sbjct: 476 YDLVLDGSEIGGGSIRTNTPEVQQKVFEILGLSAEDAQARFGFLLDAFRYGAPPHGGIAM 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           G+DRIV LL G  ++R+V  FP +    D L G+P+ V   QLRELG
Sbjct: 536 GVDRIVTLLAGRDSIRDVIAFPKAATGADPLTGAPAPVDAAQLRELG 582


>gi|329945595|ref|ZP_08293328.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328528598|gb|EGF55563.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 559

 Score =  566 bits (1458), Expect = e-159,   Method: Composition-based stats.
 Identities = 223/573 (38%), Positives = 318/573 (55%), Gaps = 32/573 (5%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           + F+D+RD  GI QVV        EIA  +R+E+VL I G V +R     N N+ TG+IE
Sbjct: 1   MAFIDLRDASGIAQVVIR-----EEIAHDLRAEYVLAITGEVSARPEGNANPNLPTGEIE 55

Query: 96  LSAQKIEILSVAEELPLPVFGERE----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
           +    +EIL+ +  LP  V    E      E  R +YR+LDLRR ++   I  R+++  +
Sbjct: 56  VVVSDVEILNASAPLPFQVSDHAEDSGQVGEEARLRYRYLDLRRSSMQYAIRLRSKVSQA 115

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
            R  + + +F+E  TP LT S+PEGARDFLVP+R+  GS+YALPQ+PQ +KQLLM +G +
Sbjct: 116 ARRVLDSHDFVEIETPTLTRSTPEGARDFLVPARLTPGSWYALPQSPQLFKQLLMVAGME 175

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           RY+QIA C+RDED R+DR P EF QLD+EMSFVEQDD++   E+VLR V+        + 
Sbjct: 176 RYYQIARCYRDEDFRADRQP-EFTQLDVEMSFVEQDDVIAVAEDVLREVWALIG--YDLP 232

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
               R+ Y DA+ RYG+DKPDLR    + ++T+HF  + FRVF         Y    +  
Sbjct: 233 TPIPRMTYRDAMERYGSDKPDLRFGCELVDLTDHFKDTTFRVFQNP------YVGAVVMP 286

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL 391
            G   +R   D   EWA+ +G  GLAY+   + E G +   GPVAK++       +    
Sbjct: 287 GGASQSRRTFDAWQEWAKQRGAKGLAYVT--VGEDGTLG--GPVAKNITDTERAGLAQAT 342

Query: 392 DMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK 451
               GD  FF AG      +    AR  I +  G+I+ + + F W++D P ++ + E + 
Sbjct: 343 GADPGDCIFFAAGPVDSSRALLGAARLEIGKRCGLIDDDEWSFVWVVDAPLFKPSAEARA 402

Query: 452 ----------IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
                         H+ FT P+         D  +  A+ YD+VCNG EI  G IR H S
Sbjct: 403 DGDVALGKSAWTAVHHAFTSPKPECLDTFDTDPGNALAYAYDIVCNGNEIGGGSIRIHRS 462

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           +V  + F+ +GI ++  + +FG L  AF+ G PPHGGIA G DRIV LL  A ++R+V  
Sbjct: 463 DVQERVFNVMGIGEQEAQEKFGFLLDAFKFGAPPHGGIAFGWDRIVSLLTRADSIRDVIA 522

Query: 562 FPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           FP S    D L  +P+ ++ EQ +E G+  V  
Sbjct: 523 FPKSGGGFDPLTEAPAPITPEQRKETGVDAVPQ 555


>gi|116327961|ref|YP_797681.1| aspartyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330842|ref|YP_800560.1| aspartyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120705|gb|ABJ78748.1| Aspartate--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124531|gb|ABJ75802.1| Aspartate--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 604

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 232/594 (39%), Positives = 327/594 (55%), Gaps = 17/594 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IAKSVR 66
            G+L  S VG  + L GW  R R  GG+IF+D+RD  GI QVVA  +    E  IA+ VR
Sbjct: 18  AGELNESQVGKKIFLYGWSFRFRDQGGVIFIDLRDRTGIIQVVARKELLGEEFLIAEKVR 77

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           SE+VL + G +  R AE++N  + TG IE+   K+EIL++A+  P  +    E  E +R 
Sbjct: 78  SEYVLAVSGTLKKRDAESVNLKMQTGTIEVVLDKLEILNIAKTPPFSLDEFDEVSEELRL 137

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           KYR+LD RR+ L   ++KR   I ++R  +    F+E  TPIL  S+PEGARDFLVPSR+
Sbjct: 138 KYRYLDFRREELKNRMIKRHEFIFAIRNYLSKRKFVEIETPILNKSTPEGARDFLVPSRL 197

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           N   FYALPQ+PQ +KQ+LM  G +RYFQI  CFRDED R+DR P EF QLDME SFV Q
Sbjct: 198 NPNQFYALPQSPQIFKQILMVGGMERYFQIVKCFRDEDLRADRQP-EFTQLDMEFSFVNQ 256

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           ++IL+ +E ++  +++E  N   ++  F R+ Y  AI  YG+DKPDLR  + + +V+E  
Sbjct: 257 EEILSEIEGLVSTIYKEVFNI-QLTTPFPRMTYKTAIEEYGSDKPDLRFGMKLVDVSEIV 315

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW-ARSQGQPGLAYIFWRLDE 365
              +F VFS  +      +   +P  G   +R   +    W  R     GLAY+      
Sbjct: 316 KDCDFNVFSGAVKSGGTVKAICVP-GGSVVSRKEIEDYTAWLNRDYKAKGLAYMK----- 369

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G+      + K       +AI      ++GD  FF A +           R  +++   
Sbjct: 370 HGSEGLESTITKRFKKEELDAISKVCGSKEGDMLFFGADEKEIVNHSLGALRLKLSERFE 429

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN------DLLSIKA 479
               N     WI+DFP +EWN++ K+ D  H+PFT P         +      +     A
Sbjct: 430 TPKQNEINITWIVDFPMFEWNKDHKRWDALHHPFTSPSDESIPFFESMETLQKNASKATA 489

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H  E+  Q F  +GI +E    +FG L  A + G PPHGG+
Sbjct: 490 KAYDLVMNGVEIGGGSIRIHSREIQNQVFRVLGIGEEEAREKFGFLLEALEFGAPPHGGL 549

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A GIDR++MLL   K++R+V  FP +Q    L+   PS V  +QL+EL +++V+
Sbjct: 550 AFGIDRMLMLLTEGKSIRDVIAFPKTQRGLCLMSECPSPVEEKQLQELKIKLVK 603


>gi|224056291|ref|XP_002298795.1| predicted protein [Populus trichocarpa]
 gi|222846053|gb|EEE83600.1| predicted protein [Populus trichocarpa]
          Length = 667

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 233/598 (38%), Positives = 340/598 (56%), Gaps = 20/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT+ CG L ++DVG+ VRL GWV   R HGG+ F ++RDH GI QV   PD       I 
Sbjct: 78  RTNFCGQLSINDVGARVRLCGWVALHRVHGGLTFFNLRDHTGIVQVATLPDEFPDAHSII 137

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-----VFGE 117
             +R E+V+ ++G+V SR  E++N  + TG IE+ A+  ++L+  +             +
Sbjct: 138 NDLRVEYVVVVEGVVRSRPVESVNKKMATGSIEVVAEHAQLLNAVKAKLPFLVTTVDDAK 197

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEG 176
               E IR +YR LDLRR  +  NI+ R R++  +R  +   + F+E  TPIL+ S+PEG
Sbjct: 198 DSVKEEIRLRYRCLDLRRQQMSSNIMLRHRVVKLIRRYLEDVQGFVEIETPILSRSTPEG 257

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR+  G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Q
Sbjct: 258 ARDYLVPSRIQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQ 316

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDME++F   +D+L   E+++R VF E      + N F R+ Y +A+ RYG+D+PD R  
Sbjct: 317 LDMELAFTPMEDMLRLNEDLIRKVFLEIKGV-QLPNPFPRLTYAEAMSRYGSDRPDTRFD 375

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR---AFCDRMNEWARSQGQ 353
           + + +V++ F  S FRVF+  L      +V  +P+     +       D  NE  +S G 
Sbjct: 376 LHLKDVSDIFSESSFRVFADSLKSGGIIKVLCVPSGAKSYSNTALKKGDIYNEAIKS-GA 434

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLA++  ++ ++G   G+  +   L+  N E +  R     GD   F  G         
Sbjct: 435 KGLAFL--KVLDNGEFEGISALLSSLDSTNKEQLLSRCSAGPGDLILFAVGHHSSVNKTL 492

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
              R  IA +LG+ + + +   W+ DFP +EWNE E++++  H+PFT P          D
Sbjct: 493 DRLRLFIANQLGLNDPSRYSILWVTDFPMFEWNETEQRLEALHHPFTAPNPEDM----KD 548

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           L S +A  YD+V NG EI  G +R +  E+  +    VGI+ E  E +FG L  A   G 
Sbjct: 549 LSSARALAYDMVYNGVEIGGGSLRIYKREIQQKVLEIVGITPEQAEAKFGYLLEALDMGA 608

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGGIA G+DR+ MLL GA ++R+V  FP +      L  +PS V  +QL++L  R 
Sbjct: 609 PPHGGIAYGLDRLAMLLAGANSIRDVIAFPKTTTAQCALTRAPSEVDPQQLKDLSFRT 666


>gi|255348919|ref|ZP_05380926.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503459|ref|ZP_05381849.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 70s]
          Length = 582

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 234/592 (39%), Positives = 342/592 (57%), Gaps = 14/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
           +YRTH C +L +  VG  VRLSGWVHR R HGG++F+D+RD +GITQ+V   +      +
Sbjct: 2   KYRTHKCNELSLDHVGEHVRLSGWVHRYRNHGGVVFIDLRDCFGITQIVCRQEENPELHQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
           +   VRSEWVLC++GLV +R     N N++TG IE+    +E+LS A+ LP  +      
Sbjct: 62  LMDQVRSEWVLCVEGLVCARLEGMENPNLVTGSIEVEVSSLEVLSRAQNLPFSISDEHIN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R  YR+LD+RR  +   ++ R +++ + R  +  + F E  TPIL  S+PEGARD
Sbjct: 122 VNEELRLTYRYLDMRRGDILDRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  G+FYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+DM
Sbjct: 182 YLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFTQIDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF   +D+   +E ++  +F     G  +   FLR+ Y +A   YGTDKPDLR  + +
Sbjct: 241 EMSFGGPEDLFPVVEELVTRLFA--VKGIELKAPFLRMTYQEAKDSYGTDKPDLRFGLRL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            N  E+     F +F   L+     + + +P  G   +R   D   ++ +  G  GL +I
Sbjct: 299 KNCCEYARKLTFSIFLDQLAYGGTVKGFCVP-GGADMSRKQLDIYTDFVKRYGAMGLVWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                + G+V+    VAK  +    + +      +D D    IA             R  
Sbjct: 358 K---KQDGSVS--SNVAKFASEDVFQEMFEAFKAKDQDILLLIAAPEAVANQALDHLRRL 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+E  + +   + F WI DFP +   +EE ++   H+PFT P     SL  +D  ++++
Sbjct: 413 IAKERQLYDSTQYNFVWITDFPLF--AKEEGELCPEHHPFTAPLDEDISLLDSDPFAVRS 470

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+EIASG  R H  ++  + F+ + +S+E V+ +FG    A   G PPH GI
Sbjct: 471 SSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFGFFIDALSFGTPPHLGI 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRI+M+L GA+ +REV  FP +Q   DL+M +PS +   QL+ELGL++
Sbjct: 531 ALGLDRIMMVLTGAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582


>gi|126725152|ref|ZP_01740995.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126706316|gb|EBA05406.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 644

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 311/645 (48%), Positives = 401/645 (62%), Gaps = 65/645 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             S+VG  +RLSGWVHRVR HGGI+F+D+RDHYG+TQ++A+PDS  F+  + VRSEW + 
Sbjct: 2   NKSNVGETIRLSGWVHRVRDHGGILFIDLRDHYGMTQILADPDSPVFKDVEKVRSEWCIR 61

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           IDG V +R    IN  I TG++E+  + IE+L  A ELPL VFG++EYPE  R KYRFLD
Sbjct: 62  IDGEVKARDESLINTKIPTGEVEVFIRDIEVLGAAAELPLMVFGDQEYPEETRLKYRFLD 121

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LRR+ L  N++ R+ ++ SMR RM  + F E  TPI+TASSPEGARDFLVPSR++ G FY
Sbjct: 122 LRREKLQNNMLLRSNVVASMRKRMWDQGFNEFQTPIITASSPEGARDFLVPSRLHPGKFY 181

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           ALPQAPQQ+KQL+M SGFD+YFQIAPCFRDEDPR+DR P +FYQLD+EMSFV Q D+ +T
Sbjct: 182 ALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVTQQDVFDT 241

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++ V+ GVFEEF  G  V   + +I Y D+   YGTDKPDLRNPI M  V+EHF  S F 
Sbjct: 242 IQPVIGGVFEEFGKGRKVDQTWEQISYADSELWYGTDKPDLRNPIKMQVVSEHFAGSGFA 301

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
           +F+K+L      ++ AIPA GGG +R FCDRMN +A+ +G PG+ YIFWR      V   
Sbjct: 302 IFAKLLEQEGT-QIRAIPAPGGG-SRKFCDRMNAFAQKEGLPGMGYIFWRAKPDVKVDDA 359

Query: 373 G---------PVAKHLNIVNTEA---------------IRVRLDMQDGDSCFFIAGDPLK 408
                      VAK + +                    I   +     D    +  + L+
Sbjct: 360 FMELIADVNAAVAKKMGMAAVSKGQAVSGIKTPFLSHLIGALVAAGAEDKAVQLREEYLE 419

Query: 409 FCSFAAD--------------------------------------ARNHIAQELGIINCN 430
                A                                       AR  I ++LG+++ N
Sbjct: 420 AAGPLAKNIGPERTEAIRKQLDLGVGDAAFFLGGKPKAFEAVAGRARTEIGEQLGLVDEN 479

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
            F F WI+DFP YE +EE  K+DF+HNPF+MPQGG+E+L   D L +  +QYDL CNG+E
Sbjct: 480 RFAFAWIVDFPMYEVDEESGKVDFSHNPFSMPQGGLEAL-NQDPLKVLGYQYDLACNGYE 538

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           + SG IRNH  E+M +AF   G   + V+ RFGG+ +AF  G PPHGG AAGIDRIVMLL
Sbjct: 539 LISGAIRNHQPEIMFKAFELAGYGNDEVKKRFGGMVKAFTYGAPPHGGCAAGIDRIVMLL 598

Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
               N+REV +FPM+Q   D +M +PS    EQLREL LR++   
Sbjct: 599 ADEANIREVIMFPMNQRAEDSMMEAPSEPLNEQLRELRLRVLPPE 643


>gi|281412789|ref|YP_003346868.1| aspartyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281373892|gb|ADA67454.1| aspartyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 579

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 237/590 (40%), Positives = 342/590 (57%), Gaps = 15/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L  +D G  V+L GWV R+R  GG+ F+D+RD YG TQ+V + +S  + +   
Sbjct: 3   RTHTCGELKATDEGKKVKLCGWVDRIRDLGGVRFIDLRDRYGETQIVCDVNSEAYSVVDE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E V+ ++G V  R   T N NI TG+IE+ A++IEILS+A+   LP +      E +
Sbjct: 63  LTRESVVLVEGTVRKRPEGTENPNIETGEIEVVAERIEILSLADP--LPFYPGEAPKEEM 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR++DLR + + +NI+ R +I   +R       F+E  TP LT S+PEGARDFLVPS
Sbjct: 121 RLKYRYIDLRSERMKRNIILRYKISKIIRDYFDELGFLEIETPFLTRSTPEGARDFLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D+EMSFV
Sbjct: 181 RLRPGKFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQVDVEMSFV 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +D++N  E ++  VF E S  + +   F RI YD+A+ +YGTDKPD R  + + +   
Sbjct: 240 DVEDVMNVSEGMVSRVFRESSGID-LKVPFDRIPYDEAMEKYGTDKPDRRYGMELRDFGY 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  +EF+V   +L      + + +P      +R   + + E  +  G  GL +      
Sbjct: 299 AFETTEFKVIRNVLDEGGSVKGFIVPGFASEMSRKKGEELMERMKELGLGGLIWFKL--- 355

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHIAQE 423
              +     P  KHL       I    +M +GD C      D           R  I +E
Sbjct: 356 ---DGGITSPHLKHL-EKEFRKIAETENMNEGDVCLIAAHTDRNLLNEALGTLRLEIGKE 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
                   F+  W++DFP++EW+EEE++    H+PFTMP        G+D   ++A  YD
Sbjct: 412 HFSHLAKGFDVLWVVDFPYFEWSEEEERFVARHHPFTMPVLET---LGDDYTKVRAKAYD 468

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG+E+  G IR H  ++  + F  +G+S+E  + +FG    AF+ G+PPHGGIA G+
Sbjct: 469 LVINGYEVGGGSIRIHRRDIQEKIFELLGLSEEEAQKKFGFFLEAFRYGVPPHGGIAFGL 528

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           DR+V ++ G  ++REV  FP + N   LL G+P+ V   QLREL +RI E
Sbjct: 529 DRLVSIIAGESSIREVIAFPKTGNGVCLLTGAPAEVDERQLRELRIRIEE 578


>gi|260655466|ref|ZP_05860954.1| aspartate--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260629914|gb|EEX48108.1| aspartate--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 602

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 220/597 (36%), Positives = 336/597 (56%), Gaps = 14/597 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT  CG +    VGS V L+GWV + R  GG++F+D+ DH G+ Q V NP+     + K 
Sbjct: 15  RTVYCGRVTEGQVGSRVVLNGWVRKRRDLGGVVFIDLWDHTGLVQTVFNPEQCPESVHKA 74

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-Y 120
              +RSE+ + + G V  R   T N ++ TG+ E+ A  + +L+ ++ LP  +  E +  
Sbjct: 75  AGDLRSEYCVAVTGTVRVRPQGTENESLPTGKWEVMADNLLVLAPSKGLPFEIGDETDDV 134

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E+IR   R+LDLRRD +   +  R    +  R  + +  F+E  TP L  S+PEGARD+
Sbjct: 135 DENIRLASRYLDLRRDKMQHFLRTRAAAAHFTRNYLESHGFLEVETPTLVKSTPEGARDY 194

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+  G+FYALPQ+PQ +KQLLM SG DRY+Q+A C+RDED R+DR P EF Q+D+E
Sbjct: 195 LVPSRLVPGNFYALPQSPQIFKQLLMVSGVDRYYQLARCYRDEDLRADRQP-EFTQVDLE 253

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+ ++DI + +E  + G+++E    + V     RI + +A+ R+G+DKPD+R P  + 
Sbjct: 254 MSFLTEEDIYSLLEGYVNGLWKEILGVD-VPIPLKRITWHEAMNRFGSDKPDMRIPFELQ 312

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++ E F  + F +F  I+      +  A+P  G   +R   D +   A++ G P LA   
Sbjct: 313 DLKEVFEGAGFALFQSIIDDGGTIKAIALP-GGASLSRKGTDDVIAAAKALGAPDLAAFQ 371

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNH 419
           ++     +    GP+ K L+      +        GD+ F +   D    C+     R  
Sbjct: 372 YK-----DAGLKGPLCKFLDEARQAKLLEATKAAKGDAIFLMAHRDWQLVCTVLGQLRLD 426

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+  G++    ++F W+ DFP +EW++E+ +    H+PFTMP+             + A
Sbjct: 427 LARAHGLV-EEGWKFLWVTDFPMFEWSKEDNRWCAMHHPFTMPRESDLDKLETAPGEVCA 485

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG E+  G IR H S V  + F  +G+++E   +RFG L +A Q G PPHGG+
Sbjct: 486 RAYDIVLNGVELGGGSIRIHESSVQSRVFKAIGLTEEAASDRFGFLLQALQFGTPPHGGL 545

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           A G DR+ MLL G K+VR+V  FP +    DL+  +P TV+  QL ELGL + +  K
Sbjct: 546 ALGFDRVCMLLSGGKSVRDVIAFPKTARAQDLMSHAPDTVADSQLDELGLFVRQKTK 602


>gi|88608344|ref|YP_506361.1| aspartyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|88600513|gb|ABD45981.1| aspartyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 588

 Score =  565 bits (1455), Expect = e-159,   Method: Composition-based stats.
 Identities = 273/591 (46%), Positives = 381/591 (64%), Gaps = 9/591 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR    G++    +G  ++L+GWV R R HG I+F+D+RD YG+TQ+V +     FE  +
Sbjct: 6   YRDCGIGEISEEHIGKVIKLAGWVFRKRDHGAILFIDLRDAYGVTQLVISESIDGFEELR 65

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V  E V+ + GLV +RS ETIN+++  G+IE+  +   + S A  LPL V  E  YPE 
Sbjct: 66  CVSCESVITVQGLVSARSPETINSSLQNGRIEVIVKSWSVNSHASSLPLQVDSEFPYPEE 125

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRR+ L KNI+ R++II+ +R  M  E F E  TPILTA+SPEGARD++VP
Sbjct: 126 TRLRYRYLDLRRNKLKKNIILRSKIISEIRRFMEDEGFTEFQTPILTATSPEGARDYIVP 185

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+EMSF
Sbjct: 186 SRIHKGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDSRADRSPGEFYQLDVEMSF 245

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V Q+++   ME +L+ +F ++SN   VS +F RI Y +++  YGTDKPDLRNPI + + T
Sbjct: 246 VGQEEVFELMEQLLKHIFSKYSNRK-VSGSFERIPYKESMLLYGTDKPDLRNPIKIADFT 304

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYIFWR 362
             F  S   VF + +           P  G    R F D M  +A ++    GLAY+ + 
Sbjct: 305 SIFKESGLAVFIEQIQKGAVVRGIPAPNCGNK-PRKFFDEMIRYATTELCARGLAYLCF- 362

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                N    GP+AK L+      I  +  +  GD+ FF           A   R  +  
Sbjct: 363 ----DNGIPKGPIAKFLSSEQISEIAKKASLGKGDAIFFSCDAERAATKIAGAIRKKLGL 418

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +++ + ++FCWI++FP++E +E   K+DF+HNPF+MP+GG+E+L G D L + + QY
Sbjct: 419 ELSLLDNSEYKFCWIVNFPYFELDETTGKLDFSHNPFSMPEGGLEALNG-DPLKVVSQQY 477

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+VCNG E++SG +RNH  E+M +AF  +G+ +E V   FG L  +FQ G+PPH GIA G
Sbjct: 478 DIVCNGVELSSGAVRNHKPEIMYRAFEILGLDREYVNRVFGALIESFQYGVPPHAGIAPG 537

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           IDR+VML+   +N+REV  FPM+Q   D LM +PS V  E+L E G+++VE
Sbjct: 538 IDRMVMLIAEEENIREVIAFPMNQRCEDTLMRAPSPVETERLLECGVKLVE 588


>gi|187250796|ref|YP_001875278.1| aspartyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|238064708|sp|B2KBB9|SYD_ELUMP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|186970956|gb|ACC97941.1| Aspartyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 583

 Score =  565 bits (1455), Expect = e-158,   Method: Composition-based stats.
 Identities = 229/588 (38%), Positives = 326/588 (55%), Gaps = 7/588 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT+ CGD+  + V S   L GWV+  R HGG++FLD+RD  G  QVV  P +  FE+A +
Sbjct: 3   RTNYCGDINKNYVNSVQVLCGWVNSYRDHGGVLFLDLRDRTGKVQVVVEPTNKDFELAST 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
            R+E+VL + GLV  R  E IN N  TG+IE+ AQ++EIL+ + +LP      R+  E  
Sbjct: 63  ARTEYVLKVTGLVRLRQTEHINPNNPTGEIEVVAQEVEILNTSIQLPFEPDNSRQINEET 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR++DLR   +  N+  R ++  + R       FIE  TPILT S+PEGARD+LVPS
Sbjct: 123 RLKYRYIDLRNPVMLHNLTTRHKVAQAARRYFSDNGFIEIETPILTRSTPEGARDYLVPS 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G FYALPQ+PQ +KQ LMASG DRYFQIA  FRDED RSDR P E  Q+D+EMSFV
Sbjct: 183 RVHEGKFYALPQSPQMFKQTLMASGVDRYFQIARAFRDEDLRSDRQP-EHTQIDIEMSFV 241

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              D+    E ++  VF+  +  +  +  F ++ Y D + +YG+DKPD+R  I + ++  
Sbjct: 242 TLADVFAAGEGMIAEVFKA-AGEDAPAAPFEQMEYADVMAKYGSDKPDIRYEIDITDIGG 300

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F +S F+V S  L+                 NR+ CD++ + A++ G  GL ++ +  D
Sbjct: 301 IFTNSNFKVVSDALANGGVVRAIKAKYGAKHINRSTCDKLTDLAKASGAKGLVWLKYSDD 360

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
                   GP AK        +++  L ++  D  F  A             R  + + L
Sbjct: 361 -----KFEGPSAKFFTEEELASLQHTLSVEKDDMVFIGADKEKVVSPVMGAIRKELIKLL 415

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            +     + F W+  FP  E+  EE + D AHNPFT P      L   D   +K++Q+DL
Sbjct: 416 CLKPNKKWAFLWVKHFPLLEFVPEENRWDAAHNPFTAPLEKDIPLLDTDPGKVKSYQFDL 475

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG E+ASG IRNH  ++  +  + +  S E    RFG L  A + G PPHGG   G+D
Sbjct: 476 VLNGVELASGSIRNHRRDLQEKILNLMKHSPEQAALRFGMLLNALEAGAPPHGGFGMGLD 535

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           R+  LL   +++REV  FP +      L  SP+ V   QL+EL ++I 
Sbjct: 536 RLAALLCKEESIREVIAFPKTATAYCPLTESPNVVEDIQLKELHIKIK 583


>gi|237802971|ref|YP_002888165.1| aspartyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|231274205|emb|CAX10999.1| aspartyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 582

 Score =  565 bits (1455), Expect = e-158,   Method: Composition-based stats.
 Identities = 233/592 (39%), Positives = 340/592 (57%), Gaps = 14/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
           +YRTH C +L +  VG  VRLSGWVHR R HGG++F+D+RD +GITQ+V   +      +
Sbjct: 2   KYRTHKCNELSLDHVGEHVRLSGWVHRYRNHGGVVFIDLRDCFGITQIVCRQEENPELHQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
           +   VRSEWVLC++GLV +R     N N++TG IE+    +E+LS A+ LP  +      
Sbjct: 62  LMDQVRSEWVLCVEGLVCARLEGMENPNLVTGSIEVEVSSLEVLSRAQNLPFSISDEHIN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R  YR+LD+RR  +   ++ R +++ + R  +  + F E  TPIL  S+PEGARD
Sbjct: 122 VNEELRLTYRYLDMRRGDILDRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  G+FYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+DM
Sbjct: 182 YLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFTQIDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF E +D+   +E ++  +F     G  +   FLR+ Y +A   YGTDKPDLR  + +
Sbjct: 241 EMSFGEPEDLFPVVEELVARLFA--VKGIELKAPFLRMTYQEAKDSYGTDKPDLRFGLRL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            N  E+     F +F   L+     + + +P  G   +R   D   ++ +  G  GL +I
Sbjct: 299 KNCCEYARKFTFSIFLDQLAYGGTVKGFCVP-GGADMSRKQLDIYTDFVKRYGAMGLVWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                   +      VAK  +    + +    + +D D    IA             R  
Sbjct: 358 K-----KQDGGVSSNVAKFASEDVFQEMFEAFEAKDQDILLLIAAPEAVANQALDHLRRL 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+E  + +   + F WI DFP +   +EE ++   H+PFT P     SL  +D  ++++
Sbjct: 413 IARERQLYDSTQYNFVWITDFPLF--AKEEGELCPEHHPFTAPLDEDISLLDSDPFAVRS 470

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+EIASG  R H  ++  + F+ + +S+E V+ +FG    A   G PPH GI
Sbjct: 471 SSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFGFFIDALSFGTPPHLGI 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRI+M+L GA+ +REV  FP +Q   DL+M +PS +   QL+ELGL++
Sbjct: 531 ALGLDRIMMVLTGAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582


>gi|255507138|ref|ZP_05382777.1| aspartyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525587|emb|CBJ15065.1| aspartyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435147|gb|ADH17325.1| aspartyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438867|gb|ADH21020.1| aspartyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 582

 Score =  565 bits (1455), Expect = e-158,   Method: Composition-based stats.
 Identities = 232/592 (39%), Positives = 338/592 (57%), Gaps = 14/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
           +YRTH C +L +  VG  VRLSGWVHR R HGG++F+D+RD +GITQ+V   +      +
Sbjct: 2   KYRTHKCNELSLDHVGEHVRLSGWVHRYRNHGGVVFIDLRDCFGITQIVCRQEENPELHQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
           +   VRSEWVLC++GLV +R     N N++TG IE+    +E+LS A+ LP  +      
Sbjct: 62  LMDQVRSEWVLCVEGLVCARLEGMENPNLVTGSIEVEVSSLEVLSRAQNLPFSISDEHIN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R  YR+LD+RR  +   ++ R +++ + R  +  + F E  TPIL  S+PEGARD
Sbjct: 122 VNEELRLTYRYLDMRRGDILDRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  G+FYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+DM
Sbjct: 182 YLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFTQIDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF   +D+   +E ++  +F     G  +   FLR+ Y +A   YGTDKPDLR  + +
Sbjct: 241 EMSFGGPEDLFPVVEELVTRLFA--VKGIELKAPFLRMTYQEAKDSYGTDKPDLRFGLRL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            N  E+     F +F   L+     + + +P  G   +R   D   ++ +  G  GL +I
Sbjct: 299 KNCCEYARKLTFSIFLDQLAYGGTVKGFCVP-GGADMSRKQLDIYTDFVKRYGAMGLVWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                   +      VAK  +    + +      +D D    IA             R  
Sbjct: 358 K-----KQDGGVSSNVAKFASEDVFQEMFEAFKAKDQDILLLIAAPEAVANQALDHLRRL 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+E  + +   + F WI DFP +   +EE ++   H+PFT P     SL  +D  ++++
Sbjct: 413 IAKERQLYDSTQYNFVWITDFPLF--AKEEGELCPEHHPFTAPLDEDISLLDSDPFAVRS 470

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+EIASG  R H  ++  + F+ + +S+E V+ +FG    A   G PPH GI
Sbjct: 471 SSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFGFFIDALSFGTPPHLGI 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRI+M+L GA+ +REV  FP +Q   DL+M +PS +   QL+ELGL++
Sbjct: 531 ALGLDRIMMVLTGAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582


>gi|300173445|ref|YP_003772611.1| aspartyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887824|emb|CBL91792.1| Aspartyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 588

 Score =  565 bits (1455), Expect = e-158,   Method: Composition-based stats.
 Identities = 210/596 (35%), Positives = 323/596 (54%), Gaps = 12/596 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEI 61
             RT   G +    +G  V LSGWV + R  G +IF+D+RD  GI Q+  +  +     +
Sbjct: 1   MKRTTYAGLIDEKYLGQTVTLSGWVQKRRDFGDLIFVDLRDREGIVQLTFSATNQIALSV 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ +RSE+V+ I GLV++R+ + +N  I +G+IE++    +IL+ ++  P  +       
Sbjct: 61  AEEMRSEYVISITGLVVNRNDDQVNNKIKSGKIEINVTDAKILATSKTPPFYIENGVNAN 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E ++ KYR+LDLRR  + +N+  R++I++S    M   +FI   TPIL  S+PEGARD+L
Sbjct: 121 EELKLKYRYLDLRRPEMQQNLRIRSKIMSSAMHFMDQNDFINIETPILAKSTPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  GSFYALPQ+PQ +KQLLM +GFDRYFQIA  FRDED R DR P EF Q+D+E 
Sbjct: 181 VPSRIFPGSFYALPQSPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQP-EFTQMDIET 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF+  D+I   +   ++ +  +  N +  +     + + +++ R+GTDKPDLR    + +
Sbjct: 240 SFMSADEIRTLVNAWVKTMMHDVVNFDLDTAKIPTLTWQESMDRFGTDKPDLRIAYELKD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++     S+F VF+  +      +  A+P      +R   D++ ++    G  GLA++  
Sbjct: 300 LSSIVKTSDFGVFTNAIKAGGVVKAIAVPGGADKYSRKGLDKLAQYIERFGAKGLAWLKV 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                 +    GP+AK         +      + GD   F AG      +     R   A
Sbjct: 360 T-----DEGLKGPIAKFFPEG--NDLIHATGAKVGDLLLFGAGRTDIVAATLDYLRRQTA 412

Query: 422 QELGIIN-CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           ++L ++N  N + F WI+D+P +E++E+  +   AH+PFTMP            D     
Sbjct: 413 KDLELVNQENAWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPNEEDLHYLDEGEDPHQAH 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG+E+ SG IR H   +  +    +G + E     FG L      G PP GG
Sbjct: 473 AQSYDLVLNGYELGSGSIRIHNMAIQEKMLKALGFTPEAAHEAFGFLLEGMDFGFPPMGG 532

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA G+DR+ MLL G +N+REV  FP +    + +  +P  V  +QL +LGL + EN
Sbjct: 533 IALGLDRLAMLLAGQENIREVIAFPKNSRATEPMTQAPMPVDGKQLNDLGLFVPEN 588


>gi|168698078|ref|ZP_02730355.1| aspartyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 630

 Score =  565 bits (1455), Expect = e-158,   Method: Composition-based stats.
 Identities = 231/631 (36%), Positives = 331/631 (52%), Gaps = 51/631 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RTH+C  L    VGS   L+GWV   R +G  +F+D+RD YG+TQVV     D+  F  A
Sbjct: 6   RTHTCDQLREEHVGSTATLNGWVLTARDNGHQVFIDLRDRYGLTQVVFRKADDAELFACA 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREY 120
           + +++EWVL + G V  R      A+I TG IEL A+ + +L+        +  FG    
Sbjct: 66  QRLKAEWVLSVTGTVQKRLEGAARADIATGAIELEAKTLRVLNECPPLPFQVDEFGTELA 125

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YR+LDLRR TL K +V R R+   +R  M A +F+E  TP+L  S+PEGARD+
Sbjct: 126 NEDLRLQYRYLDLRRRTLQKTLVLRHRLCKVIRDYMDANHFLEVETPLLGKSTPEGARDY 185

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  G F+ALPQ+PQ YKQLLM SG+DRYFQIA C RDED R+DR P EF QLD+E
Sbjct: 186 LVPSRVFNGEFFALPQSPQLYKQLLMISGYDRYFQIARCLRDEDLRADRQP-EFTQLDVE 244

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVE++D+L+ ME +   +F++      +   F R+ Y +A+ +YG+DKPDLR  + + 
Sbjct: 245 MSFVEREDVLSVMEKLAADIFDKCLGVK-LPLPFPRLGYAEAMAKYGSDKPDLRFGLEIV 303

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGLA 357
           ++T+    SE +     ++                 +         + + A +    GLA
Sbjct: 304 DITDIAGASEAQFLKDAVAGGGVVRAINAKGGAAAFSNTALKPGGELPKVAETYKAKGLA 363

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++     E G     G   K  +      ++ RL   DGD   F+A      C      R
Sbjct: 364 WMKV---EGGK--FTGSTEKFFSDELKAKLKERLSAADGDLLLFVADKEAVVCDALGALR 418

Query: 418 NHIAQELGIIN-----------------------------------CNCFEFCWIMDFPF 442
            H+A +L +                                        F F W++DFP 
Sbjct: 419 IHLATKLKLYKNWWDEKAEHEKAEKDKADAAKKKKEVYVPVPFQPRAEHFNFAWVLDFPM 478

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           + WNEEE + D  H+PFT P         +   L  ++A  YD+V NG+E+  G IR H 
Sbjct: 479 FTWNEEENRWDAMHHPFTAPMDEDLPNFWQNESLGKVRAKAYDMVLNGYEVGGGSIRIHR 538

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            +V  + F   G++ E  + RFG L  A + G PPHGGIA G+DR  M++ G  N+R+V 
Sbjct: 539 QDVQSRVFEIFGMTPEDAQGRFGFLLDALKSGAPPHGGIALGLDRWAMVIAGTTNIRDVI 598

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            FP +Q   DL+ G+P+ V   QL+ELG+++
Sbjct: 599 AFPKNQKARDLMTGAPAAVDARQLKELGVKL 629


>gi|15644191|ref|NP_229240.1| aspartyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6919972|sp|Q9X1F4|SYD_THEMA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|4982006|gb|AAD36510.1|AE001796_2 aspartyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 579

 Score =  564 bits (1454), Expect = e-158,   Method: Composition-based stats.
 Identities = 239/590 (40%), Positives = 343/590 (58%), Gaps = 15/590 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L  +D G  V+L GWV R+R  GG+ F+D+RD YG TQ+V + +S  + +   
Sbjct: 3   RTHTCGELRATDEGKKVKLCGWVDRIRDLGGVRFIDLRDRYGETQIVCDVNSEAYSVVDE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E V+ ++G V  R   T N NI TG+IE+ A++IEILS+A+   LP +      E +
Sbjct: 63  LTRESVVLVEGTVRKRPEGTENPNIETGEIEVVAERIEILSLADP--LPFYPGETPKEEM 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR++DLR + + +NI+ R RI   +R       F+E  TP LT S+PEGARDFLVPS
Sbjct: 121 RLKYRYIDLRSERMKRNIILRYRISKIIRDYFDELGFLEIETPFLTRSTPEGARDFLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D+EMSFV
Sbjct: 181 RLRPGKFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQVDVEMSFV 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +D+LN  E ++  VF+E S  + +   F RI YDDA+ +YGTDKPD R  + + +   
Sbjct: 240 DVEDVLNVSEGMVSRVFKESSGID-LKVPFDRIPYDDAMEKYGTDKPDRRYGMELRDFGY 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F  +EF+V   +L+     + + +P      +R   + +    +  G  GL +      
Sbjct: 299 AFETTEFKVIRNVLNEGGSVKGFIVPGFASEMSRKKGEELMARMKELGLGGLIWFKL--- 355

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHIAQE 423
              +     P  KHL       I    +M +GD C      D           R  I +E
Sbjct: 356 ---DGGITSPHLKHL-EKEFRKIAETENMNEGDVCLIAAHTDRNLLNEALGTLRLEIGKE 411

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
                   F+  W++DFP++EW+EEE++    H+PFTMP        G+D   ++A  YD
Sbjct: 412 HFSHLAKGFDVLWVVDFPYFEWSEEEERFVARHHPFTMPVLET---LGDDYTKVRAKAYD 468

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG+E+  G IR H  ++  + F  +G+S+E  + +FG    AF+ G+PPHGGIA G+
Sbjct: 469 LVINGYEVGGGSIRIHRRDIQEKIFELLGLSEEEAQKKFGFFLEAFRYGVPPHGGIAFGL 528

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           DR+V ++ G  ++REV  FP + N   LL G+P+ V   QLREL +RI E
Sbjct: 529 DRLVSIIAGESSIREVIAFPKTGNGVCLLTGAPAEVDERQLRELRIRIEE 578


>gi|224499821|ref|ZP_03668170.1| aspartyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 552

 Score =  564 bits (1453), Expect = e-158,   Method: Composition-based stats.
 Identities = 210/557 (37%), Positives = 311/557 (55%), Gaps = 9/557 (1%)

Query: 41  IRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSA 98
           +RD  GI QVV NP+      EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A
Sbjct: 1   MRDREGIVQVVFNPEFSKEALEIADSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLA 60

Query: 99  QKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA 158
           ++I IL+ ++  P  +       + +R KYR+LDLRR  ++     R  +  + R ++ A
Sbjct: 61  EEITILNTSKTPPFYIEDGVNVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDA 120

Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
             F +  TP LT S+PEGARD+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  
Sbjct: 121 LGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVR 180

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
           CFRDED R DR P EF Q+D+E SF+ +++I    E++L  V +E  N       F R+ 
Sbjct: 181 CFRDEDLRGDRQP-EFTQIDLETSFLTKEEIQAITEDMLVDVVKEAKNITI-EKPFPRMT 238

Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
           Y +A+ R+G+DKPD+R  + + NV++     +F+VF   +      +     A     +R
Sbjct: 239 YKEAMDRFGSDKPDIRFGLELQNVSDVVKDVDFKVFQSAIENGGEVKAINAKAAAANFSR 298

Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398
              D +  +  + G  GLA++     E+G +   GP+AK         ++V L  +DGD 
Sbjct: 299 KDLDALGVFVANYGAKGLAWLKV---EAGELK--GPIAKFFPEDKAAELKVALQAEDGDL 353

Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
             F A       +     RN + ++L +IN     F W+ D+P +E++EE  +   AH+P
Sbjct: 354 LLFAADKADIVAASLGALRNKLGKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHP 413

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           FT+P+     L   D   + A  YD+V NG+EI  G +R +  EV    F  +G + E  
Sbjct: 414 FTLPKEEDIPLLETDSSKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESA 473

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
           + +FG L  A + G PPHGGIA G+DRIVM+L G  N+R+   FP + +  D L  +P  
Sbjct: 474 KEQFGFLMDALEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGE 533

Query: 579 VSVEQLRELGLRIVENP 595
           VS  QL EL L  V+  
Sbjct: 534 VSEAQLAELKLETVKKE 550


>gi|269302446|gb|ACZ32546.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 584

 Score =  564 bits (1453), Expect = e-158,   Method: Composition-based stats.
 Identities = 225/593 (37%), Positives = 334/593 (56%), Gaps = 14/593 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
           +YRTH C +L  + +G  V+L+GWVHR R HGG++F+D+RD +GITQ+V   D      +
Sbjct: 2   KYRTHRCNELTSNHIGENVQLAGWVHRYRNHGGVVFIDLRDRFGITQIVCREDEQPELHQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGERE 119
              +VRSEWVL + G V  R A   N N+ TG IE+     E+LS ++ LP  +      
Sbjct: 62  RLDAVRSEWVLSVRGKVCPRLAGMENPNLATGHIEVEVASFEVLSKSQNLPFSIADDHIN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LD+RR  + + ++ R +++ + R  M A+ F E  TP+L  S+PEGARD
Sbjct: 122 VNEELRLEYRYLDMRRGDIIEKMLCRHQVMLACRNFMDAQGFTEIVTPVLGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  G FYALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D+
Sbjct: 182 YLVPSRIYPGKFYALPQSPQLFKQLLMVGGLDRYFQIATCFRDEDLRADRQP-EFAQIDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF +  D+   +E ++  +F   + G  +     ++ Y +A   YGTDKPDLR  + +
Sbjct: 241 EMSFGDTQDLFPIIEQLVATLFA--TQGIEIPLPLAKMTYQEAKDSYGTDKPDLRFDLKL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +  ++   S F +F   L+     + + +P  G   +R   D   E+ +  G  GL +I
Sbjct: 299 KDCRDYAKRSSFSIFLDQLAHGGTIKGFCVP-GGATMSRKQLDGYTEFVKRYGAMGLVWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                 +        +AK ++      +    D +D D    IA             R  
Sbjct: 358 K-----NQEGKVASNIAKFMDEEVFHELFAYFDAKDQDILLLIAALESVANQSLDHLRRL 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+E  + + N + F WI DFP +    E+ KI   H+PFT P      L   D L++++
Sbjct: 413 IAKERELYSDNQYNFVWITDFPLFSL--EDGKIVAEHHPFTAPLEEDIPLLETDPLAVRS 470

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+EIASG  R H  ++  Q F+ + +S E ++ +FG   +A   G PPH GI
Sbjct: 471 SSYDLVLNGYEIASGSQRIHNPDLQSQIFTILKMSPESIQEKFGFFIKALSFGTPPHLGI 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G+DR+VM+L  A+++REV  FP +Q   DL+M +PS +   QL+EL +++ 
Sbjct: 531 ALGLDRLVMVLTAAESIREVIAFPKTQKASDLMMNAPSEIMSSQLKELSIKVA 583


>gi|116512888|ref|YP_811795.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123025168|sp|Q02WJ0|SYD_LACLS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116108542|gb|ABJ73682.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 590

 Score =  564 bits (1453), Expect = e-158,   Method: Composition-based stats.
 Identities = 220/604 (36%), Positives = 339/604 (56%), Gaps = 24/604 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RT+  G++    +   + + GWV + R  GG+IF+D+RD  GI Q+V NP++A  E+A
Sbjct: 1   MKRTNYAGNITEEYLNQTITVKGWVAKRRNLGGLIFIDLRDREGIVQIVVNPETAATEVA 60

Query: 63  ---KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
                 R+E+VL + G V+ R+++  N  I TG IE+ A  IEILS ++  P  +  + E
Sbjct: 61  EAADKARNEFVLEVTGKVVERASK--NDKIKTGGIEIEATAIEILSTSKTTPFEIKDDVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R KYR+LDLRR  + KNI  R     S+R  +    FI+  TP L  S+PEGARD
Sbjct: 119 VLDDTRLKYRYLDLRRPEMLKNITMRHATTRSIREYLDGAGFIDVETPFLNKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +G DRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGEFYALPQSPQLMKQLLMTAGLDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ +++I    E ++  V ++    + V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLGEEEIQELTEELIAKVMKDVKGID-VTLPFPRMNYDDAMNFYGSDKPDTRFELLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +++      +F+VF +        +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 TDLSALAKTVDFKVFQEA----EVVKAIVVKGAADKYSRKSIDKLTEQAKQNGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +   E       G ++K L   +T++    L + D D   F+A       S     R  
Sbjct: 353 KFEKGE-----FAGGISKFL-AESTDSFVNELKLTDNDLVLFVADSLDVANSALGALRLT 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK-------GN 472
           I ++ G+I+   F F W++D+P +EW++EE++   AH+PFT+P    ++          +
Sbjct: 407 IGKQQGLIDFRKFNFLWVIDWPMFEWSDEEERYMSAHHPFTLPTKETQAFLSADGHRKDS 466

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DL  ++A  YD+V NG+E+  G +R +  ++  +  S +G   E    +FG L  A   G
Sbjct: 467 DLKKVRAHAYDIVLNGYELGGGSLRINSRDLQEEMLSALGFKLEDANEQFGFLLEALDYG 526

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG+A G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL +++ 
Sbjct: 527 FPPHGGLALGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSIVADKQLEELSIKLA 586

Query: 593 ENPK 596
              +
Sbjct: 587 NKDQ 590


>gi|15835443|ref|NP_297202.1| aspartyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285624|ref|ZP_06195018.1| aspartyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289634|ref|ZP_06195936.1| aspartyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301337020|ref|ZP_07225222.1| aspartyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13878783|sp|Q9PJK0|SYD_CHLMU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|7190856|gb|AAF39629.1| aspartyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 582

 Score =  564 bits (1453), Expect = e-158,   Method: Composition-based stats.
 Identities = 234/592 (39%), Positives = 341/592 (57%), Gaps = 14/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
           +YRTH C +L ++ VG  VRLSGWVHR R HGG++F+D+RD +GITQ+V   +       
Sbjct: 2   KYRTHKCNELSLNHVGEHVRLSGWVHRYRNHGGVVFIDLRDRFGITQIVCRQEENPELHR 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
           +   VRSEWVLC++GLV +R     N N++TG IE+    +E+LS A+ LP  +      
Sbjct: 62  LMDQVRSEWVLCVEGLVCARLGGMENPNLVTGSIEVEVSHLEVLSRAQNLPFSISDEHIN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R  YR+LD+RR  +   ++ R +++ + R  +  + F E  TP+L  S+PEGARD
Sbjct: 122 VNEELRLTYRYLDMRRGDIVDRLMCRHKVMLACRQYLDEQGFTEVVTPVLGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  G+FYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+DM
Sbjct: 182 YLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFSQIDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF   +D+   +E ++  +F     G  +S  F R+ Y +A   YGTDKPDLR  + +
Sbjct: 241 EMSFGGPEDLFPIVEELVTRLFA--VKGIELSIPFQRMTYQEAKEFYGTDKPDLRFGLRL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            N  E+     F +F   L+     + + +P  G   +R   D   ++ +  G  GL +I
Sbjct: 299 KNCCEYAKKFSFSIFLDQLAQGGTVKGFCVP-GGADISRKQLDVYTDFVKRYGAMGLVWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
               ++ G ++    VAK  +      +    + +D D    IA             R  
Sbjct: 358 K---NQDGGIS--SNVAKFASEEVFHEMFEAFEAKDQDILLLIAAPEAIANQSLDHLRRL 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+E  + +   + F WI DFP +   +EE ++   H+PFT P      L   D LS+++
Sbjct: 413 IAKERQLYDAEQYNFVWITDFPLF--AKEEGELCSEHHPFTAPLEEDIPLLDKDPLSVRS 470

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+EIASG  R H  ++  + FS + +S+E V+ +FG    A   G PPH GI
Sbjct: 471 SSYDLVLNGYEIASGSQRIHNPDLQNKIFSLLRLSQESVKEKFGFFIDALSFGTPPHLGI 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRI+M+L GA+ +REV  FP +Q   DL+M +PS +   QL+ELGL++
Sbjct: 531 ALGLDRIMMVLTGAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582


>gi|154249909|ref|YP_001410734.1| aspartyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769385|sp|A7HME4|SYD_FERNB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|154153845|gb|ABS61077.1| aspartyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 576

 Score =  564 bits (1453), Expect = e-158,   Method: Composition-based stats.
 Identities = 228/593 (38%), Positives = 349/593 (58%), Gaps = 19/593 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YRTH+CG+L  +D G  V LSGW+ R+R  GG+ F+ +RD YG TQVV NPDS  + I 
Sbjct: 1   MYRTHTCGELRGTDEGKNVILSGWIERIRDLGGVKFIVLRDRYGKTQVVVNPDSPVYPIV 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++  E+V+ ++G+V  R AE I     TG+IE+ A +++ILS +E    P +   +  E
Sbjct: 61  NNISREYVIQVEGIVRKRPAEAITPE-PTGEIEIVASELKILSKSE--LPPFYPGDDVSE 117

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LD+R   +  N++ R ++  + R  +   NF+E  TP LT S+PEGARDFLV
Sbjct: 118 EMRLKYRYLDIRNPKMMNNLILRHKLAFATREYLSNNNFLEVETPYLTKSTPEGARDFLV 177

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+ +G+FYALPQ+PQ +KQ+LM SG DRYFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 178 PSRLKKGNFYALPQSPQLFKQILMISGIDRYFQIVRCFRDEDLRADRQP-EFTQIDIEMS 236

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV  +D++N  EN++R +++       +   F RI Y++A+ +YG+DKPD R  + M ++
Sbjct: 237 FVHMEDVINLAENLIRYIYKAIG--IELPEKFDRITYEEAMEKYGSDKPDRRYGMEMVDL 294

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           TE F +S+F++  ++L      + +         +R   D  +E+ +  G  G+ +    
Sbjct: 295 TEFFKNSDFKIIKEVLERGGSVKGFKANIP---MSRKIADEYSEFVKGFGLGGVLWFKL- 350

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNHIA 421
             E+G +      AK+L     +AI  + +M +G+     A D   +        R  + 
Sbjct: 351 --ENGQIT--STTAKYL-ENEYKAIAEKYNMNEGEVFIIAAHDNRERMNEALGALRLKVG 405

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++   +  + F+  W++DFPF EW+EEE +    H+PFTMP           L  ++A  
Sbjct: 406 KQY--VKVSGFDALWVVDFPFLEWSEEEGRFVARHHPFTMPYIEDLEGGVE-LSKVRAHA 462

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+V NGFE+  G IR H  ++  + F  +G++KE  + +FG    A Q G+PPHGGIA 
Sbjct: 463 YDMVINGFEVGGGSIRIHRRDIQEKVFDIIGLTKEEAKEKFGFFLDALQYGVPPHGGIAF 522

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G+DR+  +  G  N+REV  FP + +   LL  +PS V+  QL ELG+ + ++
Sbjct: 523 GLDRLAAIAAGVDNIREVIAFPKTSSGTCLLTNAPSAVTQFQLDELGIALKQS 575


>gi|166154757|ref|YP_001654875.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155632|ref|YP_001653887.1| aspartyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301336031|ref|ZP_07224275.1| aspartyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|238687391|sp|B0B8B6|SYD_CHLT2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238687408|sp|B0B9Z5|SYD_CHLTB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|165930745|emb|CAP04242.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931620|emb|CAP07196.1| aspartyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 582

 Score =  563 bits (1452), Expect = e-158,   Method: Composition-based stats.
 Identities = 232/592 (39%), Positives = 339/592 (57%), Gaps = 14/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
           +YRTH C +L +  VG  VRLSGWVHR R HGG++F+D+RD +GITQ+V   +      +
Sbjct: 2   KYRTHKCNELSLDHVGEHVRLSGWVHRYRNHGGVVFIDLRDRFGITQIVCRQEENPELHQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
           +   VRSEWVLC++GLV +R     N N++TG IE+    +E+LS A+ LP  +      
Sbjct: 62  LMDQVRSEWVLCVEGLVCARLEGMENPNLVTGSIEVEVSSLEVLSRAQNLPFSISDEHIN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R  YR+LD+RR  +   ++ R +++ + R  +  + F E  TPIL  S+PEGARD
Sbjct: 122 VNEELRLTYRYLDMRRGDILDRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  G+FYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+DM
Sbjct: 182 YLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFTQIDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF   +D+   +E ++  +F     G  +   FLR+ Y +A   YGTDKPDLR  + +
Sbjct: 241 EMSFGGPEDLFPVVEELVTRLFA--VKGIELKAPFLRMTYQEAKDSYGTDKPDLRFGLRL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            N  E+     F +F   L+     + + +P  G   +R   D   ++ +  G  GL +I
Sbjct: 299 KNCCEYARKFTFSIFLDQLAHGGTVKGFCVP-GGADMSRKQLDIYTDFVKRYGSMGLVWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                   +      VAK  +    + +    + +D D    IA             R  
Sbjct: 358 K-----KQDGGVSSNVAKFASEDVFQEMFEAFEAKDQDILLLIAAPEAVANQALDHLRRL 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+E  + +   + F WI DFP +   +EE ++   H+PFT P     SL  +D  ++++
Sbjct: 413 IAKERQLYDSTQYNFVWITDFPLF--AKEEGELCPEHHPFTAPLDEDISLLDSDPFAVRS 470

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+EIASG  R H  ++  + F+ + +S+E V+ +FG    A   G PPH GI
Sbjct: 471 SSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFGFFIDALSFGTPPHLGI 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRI+M+L GA+ +REV  FP +Q   DL+M +PS +   QL+ELGL++
Sbjct: 531 ALGLDRIMMVLTGAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582


>gi|282855649|ref|ZP_06264960.1| aspartate--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282586497|gb|EFB91754.1| aspartate--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 602

 Score =  563 bits (1452), Expect = e-158,   Method: Composition-based stats.
 Identities = 226/593 (38%), Positives = 328/593 (55%), Gaps = 13/593 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT  CG +G   VG  + L+GWV   R HGG+IF+++ D  G  QVV  P  D      
Sbjct: 11  KRTVKCGLVGEELVGKEIVLNGWVRNRRDHGGVIFIELWDKSGSVQVVFTPEVDVKMHAD 70

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-Y 120
           A  +RSE+V+ + G +  R    IN ++ TG+ E+ A+   +LS A ++P  +  E E  
Sbjct: 71  AGDLRSEYVIAVKGTMRVRPDGMINPHMATGRWEMVARDFLLLSAAAQIPFEIGDETESV 130

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E++R  YR+LDLRR+ +  N+  R  +    R  +   +F E  TPIL  S+PEGARD+
Sbjct: 131 DENLRLTYRYLDLRRERMQNNLRTRHEVAQYTRAYLNGRDFTEVETPILMKSTPEGARDY 190

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV  GSFYALPQ+PQ +KQ+LM SG DRY+QIA CFRDED R+DR P EF Q+D+E
Sbjct: 191 LVPSRVTPGSFYALPQSPQLFKQILMISGMDRYYQIAKCFRDEDLRADRQP-EFTQVDLE 249

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV ++D+   +E  + G++++       +  F R+ Y +A+RR+G+DKPDLR P  +H
Sbjct: 250 MSFVTEEDVYELLEGYVVGLWKKILGVEI-TAPFRRLGYREAMRRFGSDKPDLRIPFEIH 308

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V+  F    F  F  +L+        A+P  G   +R  C+ +    +  G P +A+  
Sbjct: 309 DVSAAFEGCGFAPFRSLLAGGGVIRTIAVP-GGAAWSRKQCEDVAAAGKKLGAPDVAFFQ 367

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNH 419
            +          GP+AK+L+  +          QDGD+ F IA  D +   +     R  
Sbjct: 368 IK-----EGVLKGPLAKYLDDEHKAQFLEMAQAQDGDAVFLIANVDAMLVATVLGQLRLD 422

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+  G++    +EF W+ +FP  EW+ +E +    H+PFT P         +D     +
Sbjct: 423 VAKAHGLVREG-WEFLWVTNFPLLEWSPDENRWVATHHPFTQPNPEDLPYLESDPARCGS 481

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG E+  G IR H  EV  + F  +  + E  ++RFG    A + G PPHGG+
Sbjct: 482 RTYDLVLNGIEVGGGSIRIHDEEVQEKVFKCLAFTPEEAQSRFGFFLDALKYGTPPHGGL 541

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A G DR+ MLL G K +REV  FP +    DL+ G+PS V   QL ELG+ + 
Sbjct: 542 AIGFDRLCMLLCGCKGIREVMAFPKTAKAQDLMAGAPSPVEALQLDELGISVR 594


>gi|15605271|ref|NP_220057.1| aspartyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76789279|ref|YP_328365.1| aspartyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237804893|ref|YP_002889047.1| aspartyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311360|ref|ZP_05353930.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317661|ref|ZP_05358907.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|6919971|sp|O84546|SYD_CHLTR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|97196627|sp|Q3KLF5|SYD_CHLTA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3328981|gb|AAC68144.1| Aspartyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76167809|gb|AAX50817.1| aspartyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273193|emb|CAX10106.1| aspartyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|297748672|gb|ADI51218.1| Aspartyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749552|gb|ADI52230.1| Aspartyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 582

 Score =  563 bits (1452), Expect = e-158,   Method: Composition-based stats.
 Identities = 232/592 (39%), Positives = 339/592 (57%), Gaps = 14/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
           +YRTH C +L +  VG  VRLSGWVHR R HGG++F+D+RD +GITQ+V   +      +
Sbjct: 2   KYRTHKCNELSLDHVGEHVRLSGWVHRYRNHGGVVFIDLRDCFGITQIVCRQEENPELHQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
           +   VRSEWVLC++GLV +R     N N++TG IE+    +E+LS A+ LP  +      
Sbjct: 62  LMDQVRSEWVLCVEGLVCARLEGMENPNLVTGSIEVEVSSLEVLSRAQNLPFSISDEHIN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R  YR+LD+RR  +   ++ R +++ + R  +  + F E  TPIL  S+PEGARD
Sbjct: 122 VNEELRLTYRYLDMRRGDILDRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  G+FYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+DM
Sbjct: 182 YLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFTQIDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF   +D+   +E ++  +F     G  +   FLR+ Y +A   YGTDKPDLR  + +
Sbjct: 241 EMSFGGPEDLFPVVEELVARLFA--VKGIELKAPFLRMTYQEAKDSYGTDKPDLRFGLRL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            N  E+     F +F   L+     + + +P  G   +R   D   ++ +  G  GL +I
Sbjct: 299 KNCCEYARKFTFSIFLDQLAYGGTVKGFCVP-GGADMSRKQLDIYTDFVKRYGAMGLVWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                   +      VAK  +    + +    + +D D    IA             R  
Sbjct: 358 K-----KQDGGVSSNVAKFASEDVFQEMFEAFEAKDQDILLLIAAPEAVANQALDHLRRL 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+E  + +   + F WI DFP +   +EE ++   H+PFT P     SL  +D  ++++
Sbjct: 413 IARERQLYDSTQYNFVWITDFPLF--AKEEGELCPEHHPFTAPLDEDISLLDSDPFAVRS 470

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+EIASG  R H  ++  + F+ + +S+E V+ +FG    A   G PPH GI
Sbjct: 471 SSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFGFFIDALSFGTPPHLGI 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRI+M+L GA+ +REV  FP +Q   DL+M +PS +   QL+ELGL++
Sbjct: 531 ALGLDRIMMVLTGAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582


>gi|78780166|ref|YP_398278.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|97196790|sp|Q317V3|SYD_PROM9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78713665|gb|ABB50842.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 598

 Score =  563 bits (1452), Expect = e-158,   Method: Composition-based stats.
 Identities = 221/599 (36%), Positives = 343/599 (57%), Gaps = 16/599 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R   C +L  +D+G  V L GWV R R HGG+IF+D+RDH G  Q+  NPD     F+ A
Sbjct: 2   RNKICDELNNTDIGKLVNLCGWVDRRRDHGGVIFIDLRDHSGFLQITINPDDGANLFKQA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGERE 119
           +++R+E V+ + G++  R  ++IN N+ TG++EL  + ++IL+  +     P+ +     
Sbjct: 62  ETLRNETVIMVSGIINERPKDSINKNLSTGKLELKVKDLQILNQIKNNLPFPVSIHDYEN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R KYR+LDLRR  L KN+  R +II   R  +    F E  TP+LT S+PEGARD
Sbjct: 122 TKEELRLKYRYLDLRRGKLLKNLKTRHKIIKVAREFLDNFGFTEVETPLLTKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FL+PSR++ G F+ALPQ+PQ +KQLLM  G D+Y+QIA CFRDED R+DR P EF QLD+
Sbjct: 182 FLIPSRLSNGEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQP-EFTQLDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF+ +++I++  E++++ +++E  N N   N F R+ +  A+  YGTD+PD R  +++
Sbjct: 241 EMSFISEEEIISFNESLIKKIWKEVLNINF-DNAFPRMKWQAAMDNYGTDRPDTRYQMLL 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPGL 356
            ++ E      F +F+K +      +   +       +         + + A+  G  GL
Sbjct: 300 KDLGEVLGDIGFNIFTKAIKSGGSIKSITVKGGNSSISNVRIKPGGDIFQVAQDAGAGGL 359

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           A+I  + DE   +  +G +  +L+  +   I    + +DGD     AGD           
Sbjct: 360 AFIRVKGDE---LETIGAIKNNLSEEHISDILRITEAEDGDLILLGAGDKQIVNQSLDRV 416

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG---GMESLKGND 473
           R +IA++L +I+ + + F W+ DFP +E NEEE + +  H+PF  P+             
Sbjct: 417 RQYIAKDLNLIDTSKWNFLWVTDFPLFERNEEENRYEALHHPFCSPKNIKSKDSENLKKA 476

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           + +  A  YDLV NG E+  G +R H + +  +    VG++ + ++ +FG L  A + G 
Sbjct: 477 IENSIANAYDLVLNGLELGGGSLRIHEANLQREVLKTVGLTDKEIDEKFGFLIEALEMGA 536

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           PPHGGIA G+DRI ML++GA ++RE   FP +Q    LL  +PS VS  QL+EL + I 
Sbjct: 537 PPHGGIAFGLDRITMLIIGADSIRETIAFPKNQQAKCLLTNAPSNVSESQLKELDIEIT 595


>gi|320534371|ref|ZP_08034857.1| aspartyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320133413|gb|EFW25875.1| aspartyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 566

 Score =  563 bits (1452), Expect = e-158,   Method: Composition-based stats.
 Identities = 224/585 (38%), Positives = 321/585 (54%), Gaps = 34/585 (5%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           + F+D+RD  GI QVV        EIA  +R+E+VL + G V +R     N N+ TG+IE
Sbjct: 1   MAFIDLRDASGIAQVVIR-----EEIAHDLRAEYVLAVTGEVSARPEGNANPNLPTGEIE 55

Query: 96  LSAQKIEILSVAEELPLPVFGERE----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
           +    +EIL+ +  LP  V    E      E  R +YR+LDLRR  +   I  R ++  +
Sbjct: 56  VVVSDVEILNASAPLPFQVSDHAEDAGQVGEEARLRYRYLDLRRSAMQHTIRLRAKVSQA 115

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
            R  + + +F+E  TP LT S+PEGARDFLVP+R+  GS+YALPQ+PQ +KQLLM +G +
Sbjct: 116 ARRVLDSHDFVEIETPTLTRSTPEGARDFLVPARLAPGSWYALPQSPQLFKQLLMVAGME 175

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           RY+QIA C+RDED R+DR P EF QLD+EMSFVEQDD++   E+VLR V+        + 
Sbjct: 176 RYYQIARCYRDEDFRADRQP-EFTQLDVEMSFVEQDDVIAVAEDVLREVWALI--DYDLP 232

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
               R+ Y DA+ +YG+DKPDLR    + ++T++F  + FRVF         Y    +  
Sbjct: 233 TPIARMTYRDAMEKYGSDKPDLRFGCELVDLTDYFKDTTFRVFQNP------YVGAVVMP 286

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL 391
            G   +R   D   EWA+ +G  GLAY+   + + G +   GPVAK++       +    
Sbjct: 287 GGASQSRRTFDAWQEWAKQRGAKGLAYVT--VADDGTLG--GPVAKNITDAERAGLAQAA 342

Query: 392 DMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK 451
             + GD  FF AG      +    AR  I +  G+IN + + F W++D P ++ + E K 
Sbjct: 343 GAEPGDCIFFAAGPVDSSRALLGAARLEIGKRCGLINDDEWSFVWVVDAPLFKPSVEAKA 402

Query: 452 ----------IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
                         H+ FT P+         D     A+ YD+VCNG EI  G IR H S
Sbjct: 403 DGDVALGKSAWTAVHHAFTSPKPECLETFDTDPGGALAYAYDIVCNGNEIGGGSIRIHRS 462

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           +V  + F+ +GI ++  + +FG L  AF+ G PPHGGIA G DRIV LL  A ++R+V  
Sbjct: 463 DVQERVFNVMGIGEQEAQEKFGFLLDAFKFGAPPHGGIAFGWDRIVSLLTRADSIRDVIA 522

Query: 562 FPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISVTTI 606
           FP S    D L  +P+ ++ EQ +E G  +  +P K  K + T  
Sbjct: 523 FPKSGGGFDPLTEAPAPITPEQRKEAG--VDADPDKADKPAGTNK 565


>gi|30689804|ref|NP_195102.2| tRNA synthetase class II (D, K and N) family protein [Arabidopsis
           thaliana]
 gi|332660874|gb|AEE86274.1| aspartyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 664

 Score =  563 bits (1452), Expect = e-158,   Method: Composition-based stats.
 Identities = 229/599 (38%), Positives = 337/599 (56%), Gaps = 20/599 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG+L V+DVG  V L GWV   R HGG+ FL++RDH GI QV   PD       + 
Sbjct: 75  RTELCGELSVNDVGKRVHLCGWVALHRVHGGLTFLNLRDHTGIVQVRTLPDEFPEAHGLI 134

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-----VFGE 117
             +R E+V+ ++G V SR  E++N  + TG +E+ A+ +EIL+                +
Sbjct: 135 NDMRLEYVVLVEGTVRSRPNESVNKKMKTGFVEVVAEHVEILNPVRTKLPFLVTTADENK 194

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEG 176
               E IR ++R LDLRR  +  NIV R  ++  +R  +   + FIE  TPIL+ S+PEG
Sbjct: 195 DLIKEEIRLRFRCLDLRRQQMKNNIVLRHNVVKLIRRYLEDRHGFIEIETPILSRSTPEG 254

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR+  G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Q
Sbjct: 255 ARDYLVPSRIQSGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQ 313

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM+F+  +D+L   E+++R VF E      + + F R+ Y DA+ RYG+D+PD R  
Sbjct: 314 LDMEMAFMPMEDMLKLNEDLIRKVFSEIKGIQ-LPDPFPRLTYADAMDRYGSDRPDTRFD 372

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR---AFCDRMNEWARSQGQ 353
           + + +V+  F  S FRVF++ L      +V  +P      +       D  NE  +S G 
Sbjct: 373 LELKDVSNVFTESSFRVFTEALESGGIIKVLCVPLGAKKYSNSALKKGDIYNEAMKS-GA 431

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GL ++  ++ ++G + G+  +   L+         +     GD   F  G         
Sbjct: 432 KGLPFL--KVLDNGEIEGIAALVSSLDSAGKINFVKQCGAAPGDLILFGVGPVTSVNKTL 489

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
              R  +A ++ +I+ +     W+ DFP +EWNE E++++  H+PFT P+         D
Sbjct: 490 DRLRLFVAHDMDLIDHSKHSILWVTDFPMFEWNEPEQRLEALHHPFTAPKPEDMD----D 545

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           L S +A  YD+V NG EI  G +R +  +V  +    +GIS E  E++FG L  A   G 
Sbjct: 546 LPSARALAYDMVYNGVEIGGGSLRIYKRDVQEKVLEIIGISPEEAESKFGYLLEALDMGA 605

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           PPHGGIA G+DR+VM+L GA ++R+V  FP +      L  +PS V  +QL++L +R  
Sbjct: 606 PPHGGIAYGLDRMVMMLGGASSIRDVIAFPKTTTAQCALTRTPSEVDPKQLQDLSIRTK 664


>gi|125624982|ref|YP_001033465.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166225352|sp|A2RN94|SYD_LACLM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|124493790|emb|CAL98782.1| AspS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071781|gb|ADJ61181.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 590

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 221/604 (36%), Positives = 339/604 (56%), Gaps = 24/604 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RT+  G++    +   + + GWV + R  GG+IF+D+RD  GI Q+V NP++A  E+A
Sbjct: 1   MKRTNYAGNITEEYLNQTITVKGWVAKRRNLGGLIFIDLRDREGIVQIVVNPETAATEVA 60

Query: 63  ---KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
                 R+E+VL + G V+ R+++  N  I TG IE+ A  IEILS ++  P  +  + E
Sbjct: 61  EAADKARNEFVLEVTGKVVERASK--NDKIKTGGIEIEATAIEILSTSKTTPFEIKDDVE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             +  R KYR+LDLRR  + KNI  R     S+R  +    FI+  TP L  S+PEGARD
Sbjct: 119 VLDDTRLKYRYLDLRRPEMLKNITMRHATTRSIREYLDGAGFIDVETPFLNKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN+G FYALPQ+PQ  KQLLM +G DRY+QI  CFRDED R DR P EF Q+D+
Sbjct: 179 YLVPSRVNKGEFYALPQSPQLMKQLLMTAGLDRYYQIVKCFRDEDLRGDRQP-EFTQVDL 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ +++I    E ++  V ++    + V+  F R+ YDDA+  YG+DKPD R  +++
Sbjct: 238 ETSFLGEEEIQELTEELIAKVMKDVKGID-VTLPFPRMNYDDAMNFYGSDKPDTRFELLL 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +++      +F+VF +        +   +       +R   D++ E A+  G  GLA++
Sbjct: 297 TDLSALAKTVDFKVFQEA----EVVKAIVVKGAADKYSRKSIDKLTEQAKQNGAKGLAWV 352

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +   E       G V+K L   +T++    L + D D   F+A       S     R  
Sbjct: 353 KFEKGE-----FAGGVSKFL-AESTDSFVNELKLTDNDLVLFVADSLDVANSALGALRLT 406

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK-------GN 472
           I ++ G+I+   F F W++D+P +EW++EE++   AH+PFT+P    ++          +
Sbjct: 407 IGKQQGLIDFRKFNFLWVIDWPMFEWSDEEERYMSAHHPFTLPTKETQAFLSADGHRKDS 466

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DL  ++A  YD+V NG+E+  G +R +  ++  +  S +G   E    +FG L  A   G
Sbjct: 467 DLKKVRAHAYDIVLNGYELGGGSLRINSRDLQEEMLSALGFKLEDANEQFGFLLEALDYG 526

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG+A G+DR VMLL G  N+REV  FP +    D +  +PS V+ +QL EL +++ 
Sbjct: 527 FPPHGGLALGLDRFVMLLAGKDNIREVIAFPKNNKASDPMTQAPSIVADKQLEELSIKLA 586

Query: 593 ENPK 596
              +
Sbjct: 587 NKDQ 590


>gi|218187544|gb|EEC69971.1| hypothetical protein OsI_00447 [Oryza sativa Indica Group]
          Length = 719

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 226/639 (35%), Positives = 338/639 (52%), Gaps = 60/639 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R   CG+LG  D G  VRL GWV   R H G+ FL +RD  G  QV   P+    + +  
Sbjct: 89  RDALCGELGAGDAGRRVRLCGWVALHRAHAGLTFLTLRDRSGTVQVTTLPEYPEVYAVVN 148

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFG--ER 118
            +R E V+ ++G+V SR  E IN ++ TG IE++A  I +L+    +   P+      + 
Sbjct: 149 KLRVESVVAVEGVVRSRPTEAINTDMKTGAIEVAADNIYVLNSVTRSLPFPITTADTVKE 208

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGA 177
           ++PE IR ++R LDLRR  +  N+  R  ++  +R  +   + F+E  TP+L+ S+PEGA
Sbjct: 209 KFPEEIRLRFRVLDLRRPQMQSNLRLRHNVVKHIRRFLEDRHDFVEIETPVLSKSTPEGA 268

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV  G FYALPQ+PQ +KQ+LM SGF++Y+QIA CFRDED R+DR P EF QL
Sbjct: 269 RDYLVPSRVQPGMFYALPQSPQLFKQMLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQL 327

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DME++F   +D+L   E ++R +F+E  +   + N F R+ Y +A+ RYGTD+PDLR   
Sbjct: 328 DMEIAFTSMEDMLKLNEELMRHIFQEVGDIK-LPNPFPRLTYTEAMNRYGTDRPDLRFDW 386

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW--ARSQGQPG 355
            + +V++ F+ S F++F+  L      +   +P      +     +   +  A   G  G
Sbjct: 387 QLKDVSDAFLGSSFKIFADTLENGGVIKALCVPGGAKEFSNTDLKKGTVYTEASKAGAKG 446

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L ++  ++ ++G + G+GP+   L     E +   LD + GD   F  G+          
Sbjct: 447 LPFL--KVMDNGELEGIGPLVSSLKPEKKEQLLKHLDAKSGDLILFALGEQSAANRILGR 504

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID---------------------- 453
            R  IA +L +I+ +     W+ DFP +EWN +E++ +                      
Sbjct: 505 LRLFIAHKLEVIDTSAHSILWVTDFPMFEWNSDEQRYEVIVLTNKFKGQYQIIDSFWYFL 564

Query: 454 ---------------------FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
                                  H+PFT P         NDL S +A  YD++ NG EI 
Sbjct: 565 WSQKRTLTSLQNANLIAMSQKALHHPFTAPNPEDM----NDLPSARALAYDMIYNGVEIG 620

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G +R + S+V  + F  +GIS E  E +FG L   F  G PPHGGIA G+DR+VMLL G
Sbjct: 621 GGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDMGAPPHGGIAYGLDRLVMLLAG 680

Query: 553 AKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
             ++R+V  FP +      L  +PS V  +QL++LG R 
Sbjct: 681 ENSIRDVIAFPKTTTAQCSLTKAPSPVDPQQLKDLGFRT 719


>gi|57167666|ref|ZP_00366806.1| aspartyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020788|gb|EAL57452.1| aspartyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 567

 Score =  563 bits (1450), Expect = e-158,   Method: Composition-based stats.
 Identities = 233/580 (40%), Positives = 336/580 (57%), Gaps = 18/580 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVM 78
           V+L GWV+  R HGG+IF+D+RD  GI Q+V +P+      EIA   R+E+VL  +G + 
Sbjct: 2   VKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPNDSKEAHEIASRTRNEFVLIAEGKIR 61

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
            R     N  + TG+IE+   K+ I + +  +P    G+    E +R KYRFLDLR   L
Sbjct: 62  PRGEGLTNPKLKTGEIEVVVSKLIIENES-AVPPFGIGDESVNEELRLKYRFLDLRNPKL 120

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
           ++N   R++   + R  +    F+E  TPILT ++PEGARD+LVPSRV+QG FYALPQ+P
Sbjct: 121 YENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLVPSRVHQGEFYALPQSP 180

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           Q +KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D+EMSF EQ D++ T E  L+
Sbjct: 181 QLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMSFCEQKDVIATAETFLK 239

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
            +F+       +   F ++ Y +A+  YG+DKPDLR  + + +V + F  S   +F+ I 
Sbjct: 240 DIFKACGKEIQIP--FRQMPYKEAMENYGSDKPDLRFDLKLIDVIDIFAKSNNEIFANIA 297

Query: 319 SVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
             +    V A+    G    ++    R  E+ R  G  GLA+I  + D        GP+ 
Sbjct: 298 KDSKKNRVKALRVPKGDTIFSKRQMQRFEEFVRKFGAQGLAFIQVKED-----GLKGPLC 352

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K  N  +   +  R +++ GD  FF AG       +    R  +A EL +IN +  EF W
Sbjct: 353 KFFNEEDLNELIKRCELEVGDVVFFGAGVKKTVLDYMGRFRIFLAGELNLINPDALEFLW 412

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           ++DFP +E N++       H+PFTMP+   E+    DL  I +  YD+V NG E+  G I
Sbjct: 413 VVDFPMFEQNDD-GSYSAMHHPFTMPKNIDEA----DLEEISSIAYDVVLNGVELGGGSI 467

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H +++  + F  + I +E  + +FG L  A   G PPHGGIA G+DR++ML+ GA ++
Sbjct: 468 RIHKNDIQQKVFKLLNIDEEQQKEKFGFLLDALSFGAPPHGGIAIGLDRLIMLVTGANSI 527

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           REV  FP +Q    L+  +PS  S E +RELG+++ EN K
Sbjct: 528 REVIAFPKTQRAQCLMTDAPSAASNETMRELGIKLRENIK 567


>gi|269123829|ref|YP_003306406.1| aspartyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268315155|gb|ACZ01529.1| aspartyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 587

 Score =  563 bits (1450), Expect = e-158,   Method: Composition-based stats.
 Identities = 229/606 (37%), Positives = 351/606 (57%), Gaps = 23/606 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FE 60
            YR+H   +L + +V   V L+GW+ +VR  G   F+D+RD YGITQ++ N +S     E
Sbjct: 1   MYRSHKLNELRIENVNENVILAGWIDKVRDLGHFAFIDLRDRYGITQILINENSPSNLQE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + K +++E+V+ + G V+ RS++  N NI TG IE+ A ++ ILS +++LP     E   
Sbjct: 61  LVKKLKNEFVIQVKGKVVERSSK--NPNIETGDIEVLAGELTILSHSKQLPFE-LSETNV 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E++R  YR+LD+RR  + +NI KR  ++ S+R  M  E F++  TPIL  ++PEGARDF
Sbjct: 118 NENLRLTYRYLDIRRRKMLENIKKRNDMLFSIREFMNKEGFLDIDTPILGKATPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSRV +G FYALPQ+PQ +KQ LM +G D+Y+QIA CFRDED R+DR P EF QLD+E
Sbjct: 178 IVPSRVQKGEFYALPQSPQLFKQTLMVAGIDKYYQIAKCFRDEDLRADRQP-EFTQLDLE 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF+ Q+DILN +E + + VF + +        F RI YD A+  YG+DKPDLR  + + 
Sbjct: 237 MSFIHQEDILNLVERLAKKVFIDVTG-EVEDKPFERISYDYAMNNYGSDKPDLRFDMKIQ 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR-SQGQPGLAYI 359
           +++       F VF   +S        AI ++    +R     + ++ +      GLAYI
Sbjct: 296 DISNIVNGKGFSVFDDAISNGGSVR--AIVSEDKDFSRKRIKDLEDFVKVYYKAKGLAYI 353

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +  E G+++   P++K  +     ++  RLD+++ +  F +A             R  
Sbjct: 354 --KKLEDGSIS--SPISKFFDEETINSLIQRLDLKNNEIVFILADKNKAVLDGLGALRLK 409

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN-DLLSIK 478
           + +ELG+I+ + F+F W++DFP +E++EEE +   AH+PFT  +          +   I 
Sbjct: 410 LGEELGLIDKDKFKFVWVLDFPMFEYSEEEGRYQAAHHPFTSIKKDHIKYLDTKEYDKIL 469

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG+EI  G IR H S +  + F  +G+SKE   ++FG        G+PPHGG
Sbjct: 470 SESYDLVLNGYEIGGGSIRIHDSSLQSKVFDELGLSKEEQLDKFGFFLETLSYGVPPHGG 529

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           +A G+DR +M +L   +++EV  FP +    DLL G+P+ V   QL        EN  K+
Sbjct: 530 LAFGLDRWLMAMLKENSIKEVIPFPKTNKGQDLLTGAPADVDYNQL--------ENDLKL 581

Query: 599 LKISVT 604
            KI + 
Sbjct: 582 KKICIE 587


>gi|254457823|ref|ZP_05071250.1| aspartyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207085216|gb|EDZ62501.1| aspartyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 585

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 225/598 (37%), Positives = 334/598 (55%), Gaps = 21/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           R+H C DL  ++VG  V L+GW +  R HGGIIF+D+RD  G+ Q+  +P+      ++A
Sbjct: 2   RSHYCTDLNETNVGQDVVLTGWANNHRDHGGIIFIDLRDKTGLIQLTCDPEDGAQAHKVA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             VR E+VL   G V  R     N  + TG IE+   ++ I + +  +P  V G+    E
Sbjct: 62  DGVRDEYVLIAKGKVRLRGEGLTNPKLKTGAIEIIVTELIIENKSAPVPF-VIGDPNVGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+L+LR   +++    R++   + R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 121 ETRLKYRYLELRDPAVYETFRLRSKAAIAARNILDENGFLEVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHNGEFYALPQSPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +Q+D++   E +L  +F+  +    V   F RI Y++A+  YG+DKPDLR  + M +V
Sbjct: 240 FCDQEDVIVVAEKLLTAMFK--ACNINVQAPFNRITYNNAMEWYGSDKPDLRYDLKMVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F   +  +F+ I        + A+   G     ++       ++ R  G  GL Y  
Sbjct: 298 IDIFERCDNEIFTNIAKKPHINRIKALKVPGADLVFSKREMKSFEDFVRQFGAHGLGYFQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   +  RL M+ GD  FF AGD      +    R  I
Sbjct: 358 MKED-----GLKGPLIKFFSEDDIALLVERLGMEVGDVVFFGAGDKKTVWDYMGRLRIFI 412

Query: 421 AQ--ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           A+  ++ I++ + FEF W++DFP +E   E+ ++   H+PFT P+   +     D+  I+
Sbjct: 413 AEHEKMNILDRDAFEFVWVVDFPMFEV--EDGRVKALHHPFTQPKDTDKD----DVEEIE 466

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H   V  + F  +GI +E  + +FG L  A + G PPHGG
Sbjct: 467 SIAYDIVLNGTELGGGSIRIHKEAVQNEVFKLLGIEEEEAQEKFGFLLDALKFGAPPHGG 526

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            A G DR++ML+    ++R+V  FP +Q    +L  +PS V   QLR+L +R+ E  K
Sbjct: 527 FALGFDRMMMLITKKSSIRDVIAFPKTQKASCILTKAPSAVDNTQLRDLHIRLREQVK 584


>gi|24214380|ref|NP_711861.1| aspartyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|46577269|sp|Q8F5K1|SYD_LEPIN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|24195315|gb|AAN48879.1| aspartyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 601

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 229/594 (38%), Positives = 329/594 (55%), Gaps = 17/594 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVR 66
            G+L  S  G  + L GW  R R  GG+IF+D+RD  GI QVVA  +     F +A+ VR
Sbjct: 15  AGELNESQEGKQIVLFGWSFRFRDQGGVIFIDLRDRTGIIQVVARKELLGDSFTLAEKVR 74

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           SE+VL + G +  R  E+IN  + TG IE+   ++EIL+VA+  P  +    E  E ++ 
Sbjct: 75  SEYVLAVRGTLKKRDLESINPRMQTGTIEVVLDQLEILNVAKTPPFSLDEFDEVSEELKL 134

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           KYR+LD RR+ L   ++KR   I ++R  +    F+E  TPIL  S+PEGARDFLVPSR+
Sbjct: 135 KYRYLDFRREELKNRMIKRHEFIFAIRNYLNKRKFVEIETPILNKSTPEGARDFLVPSRL 194

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           N   FYALPQ+PQ +KQ+LM  G +RYFQI  CFRDED R+DR P EF QLDME SFV Q
Sbjct: 195 NPNQFYALPQSPQIFKQILMVGGMERYFQIVKCFRDEDLRADRQP-EFTQLDMEFSFVSQ 253

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           ++IL+ +E ++  +++E  N   +S  F R+ Y+ A+  YG+DKPDLR  + + +V+E  
Sbjct: 254 EEILSEIEGLVETIYKEVFNI-QLSIPFPRMTYNTAMEEYGSDKPDLRFGMKLVDVSEIV 312

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW-ARSQGQPGLAYIFWRLDE 365
              +F VF+  +      +V  +P  G   +R   +    W  R     GLAY+      
Sbjct: 313 KDCDFNVFAGAVKNGGTVKVVCVP-GGSIISRKEIEDYTAWLNRDYKAKGLAYMK----- 366

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G       + K       EAI      ++GD  FF A +           R  +++   
Sbjct: 367 HGTEGLESTITKRFKKEELEAISKACGSKEGDMLFFGADEREIVNHSLGALRLKLSERFE 426

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN------DLLSIKA 479
               N     WI+DFP +EWN++ K+ D  H+PFT P         +      +  +  A
Sbjct: 427 TPKENEINITWIVDFPMFEWNKDHKRWDALHHPFTSPSDESIPFFESMETLQKNAGNATA 486

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H  E+  + F  +GI++E  + +FG L  A + G PPHGG+
Sbjct: 487 KAYDLVMNGVEIGGGSIRIHSREIQNKVFQILGINEEEAKEKFGFLLEALEFGAPPHGGL 546

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A GIDR++MLL G K++R+V  FP +Q    L+   PS V  +QL+EL +++ +
Sbjct: 547 AFGIDRMLMLLTGGKSIRDVIAFPKTQKGLCLMSECPSPVEEKQLQELKIKLAK 600


>gi|78777284|ref|YP_393599.1| aspartyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|97196995|sp|Q30RL7|SYD_SULDN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78497824|gb|ABB44364.1| aspartate--tRNA(Asn) ligase [Sulfurimonas denitrificans DSM 1251]
          Length = 580

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 219/594 (36%), Positives = 328/594 (55%), Gaps = 21/594 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           R+H C +L  +++G  V L+GW +  R HGGIIF+D+RD  G+ Q+  +P+ +    +IA
Sbjct: 2   RSHYCTELSEANIGQEVVLAGWANSYRDHGGIIFIDLRDKSGLIQLTCDPEDSASSHKIA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+R E+VL   G V  R     N  + TG IE+   ++ I + +      V G++   E
Sbjct: 62  SSIRDEFVLVAKGKVRLRGEGLTNPRLKTGAIEIVVSELTIENRS-AAVPFVIGDKNVGE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+L+LR  ++++    R++   + R  +    F+E  TPILT S+PEGARD+LV
Sbjct: 121 ETRLKYRYLELRDPSMYETFRLRSKAAIAARNILDENGFLEVETPILTKSTPEGARDYLV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQLLM  GFDRYFQIA CFRDED R+DR P EF Q+D+EMS
Sbjct: 181 PSRVHSGEFYALPQSPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQP-EFTQIDVEMS 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+D++   E +L  +F        +   F RI Y DA+  YG+DKPDLR  + M +V
Sbjct: 240 FCNQEDVMLIAEKLLVSMFGACG--VEIKPPFNRIAYRDAMEWYGSDKPDLRYDLKMVDV 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIF 360
            + F   +  +F+ I        + A+   G     ++       ++ R  G  GL Y  
Sbjct: 298 IDIFERCDNEIFTNIAKQPHKNRIKALRVPGADLVFSKREMKTFEDFVRQFGAQGLGYFQ 357

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D        GP+ K  +  +   +  RL M+ GD  FF AGD      +    R  I
Sbjct: 358 MKED-----GLKGPLIKFFSDADIALLVDRLGMKVGDVVFFGAGDKKTVWDYMGRLRIFI 412

Query: 421 AQ--ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           A+   + + + + FEF W++DFP +E   E+ ++   H+PFT P+   +     D+  I 
Sbjct: 413 AEHERMNLADKDAFEFVWVVDFPMFEV--EDGRVKALHHPFTQPKDTDKD----DIEEID 466

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG E+  G IR H  E+  + F  +GI +E  + +FG L  A + G PPHGG
Sbjct: 467 SIAYDIVLNGTELGGGSIRIHKEEMQEEIFKLLGIGEEEAKEKFGFLLDALKFGAPPHGG 526

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            A G DR++ML+    ++R+V  FP +Q    +L  +PS V   QLR+L +++ 
Sbjct: 527 FAIGFDRLMMLISKKSSIRDVIAFPKTQKASCILTKAPSEVDATQLRDLHIKLR 580


>gi|45657956|ref|YP_002042.1| aspartyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|59798555|sp|Q72QK5|SYD_LEPIC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|45601197|gb|AAS70679.1| aspartyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 601

 Score =  561 bits (1447), Expect = e-158,   Method: Composition-based stats.
 Identities = 229/594 (38%), Positives = 329/594 (55%), Gaps = 17/594 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVR 66
            G+L  S  G  + L GW  R R  GG+IF+D+RD  GI QVVA  +     F +A+ VR
Sbjct: 15  AGELNESQEGKQIVLFGWSFRFRDQGGVIFIDLRDRTGIIQVVARKELLGDSFTLAEKVR 74

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           SE+VL + G +  R  E+IN  + TG IE+   ++EIL+VA+  P  +    E  E ++ 
Sbjct: 75  SEYVLAVRGTLKKRDLESINPRMQTGTIEVVLDQLEILNVAKTPPFSLDEFDEVSEELKL 134

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           KYR+LD RR+ L   ++KR   I ++R  +    F+E  TPIL  S+PEGARDFLVPSR+
Sbjct: 135 KYRYLDFRREELKNRMIKRHEFIFAIRNYLNKRKFVEIETPILNKSTPEGARDFLVPSRL 194

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           N   FYALPQ+PQ +KQ+LM  G +RYFQI  CFRDED R+DR P EF QLDME SFV Q
Sbjct: 195 NPNQFYALPQSPQIFKQILMVGGMERYFQIVKCFRDEDLRADRQP-EFTQLDMEFSFVSQ 253

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           ++IL+ +E ++  +++E  N   +S  F R+ Y+ A+  YG+DKPDLR  + + +V+E  
Sbjct: 254 EEILSEIEGLVETIYKEVFNI-QLSIPFPRMTYNTAMEEYGSDKPDLRFGMKLVDVSEIV 312

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW-ARSQGQPGLAYIFWRLDE 365
              +F VF+  +      +V  +P  G   +R   +    W  R     GLAY+      
Sbjct: 313 KDCDFNVFAGAVKNGGTVKVVCVP-GGSIISRKEIEDYTAWLNRDYKAKGLAYMK----- 366

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G       + K       EAI      ++GD  FF A +           R  +++   
Sbjct: 367 HGTEGLESTITKRFKKEELEAISKACGSKEGDMLFFGADEREIVNHSLGALRLKLSERFE 426

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN------DLLSIKA 479
               N     WI+DFP +EWN++ K+ D  H+PFT P         +      +  +  A
Sbjct: 427 TPKENEINITWIVDFPMFEWNKDHKRWDALHHPFTSPSDESIPFFESMETLQKNAGNATA 486

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG EI  G IR H  E+  + F  +GI++E  + +FG L  A + G PPHGG+
Sbjct: 487 KAYDLVMNGVEIGGGSIRIHSKEIQNKVFQVLGINEEEAKEKFGFLLEALEFGAPPHGGL 546

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A GIDR++MLL G K++R+V  FP +Q    L+   PS V  +QL+EL +++ +
Sbjct: 547 AFGIDRMLMLLTGGKSIRDVIAFPKTQKGLCLMSECPSPVEEKQLQELKIKLAK 600


>gi|148270483|ref|YP_001244943.1| aspartyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|147736027|gb|ABQ47367.1| aspartyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 579

 Score =  561 bits (1446), Expect = e-157,   Method: Composition-based stats.
 Identities = 232/589 (39%), Positives = 338/589 (57%), Gaps = 13/589 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L  +D G  V+L GWV R+R  GG+ F+D+RD YG TQ+V + +S  + +   
Sbjct: 3   RTHTCGELRATDEGKKVKLCGWVDRIRDLGGVRFIDLRDRYGETQIVCDVNSEAYSVVDE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E V+ ++G+V  R   T N NI TG+IE+ A+KIEILS+A+   LP +      E +
Sbjct: 63  LTRESVVLVEGIVRKRPEGTENPNIETGEIEVVAEKIEILSLADP--LPFYPGEAPKEEM 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR++DLR + + +NI+ R ++   +R       F+E  TP LT S+PEGARDFLVPS
Sbjct: 121 RLKYRYIDLRSERMKRNIILRYKVSKIIRDYFDELGFLEIETPFLTRSTPEGARDFLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G FYALPQ+PQ +KQ+LM SGFDRYFQI  CFRDED R+DR P EF Q+D+EMSFV
Sbjct: 181 RLRPGKFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQP-EFTQVDVEMSFV 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +D+LN  E ++  VF E    + +   F RI YD+A+ +YGTDKPD R  + + +   
Sbjct: 240 DVEDVLNVSERMISRVFRESLGVD-LEVPFDRITYDEAMEKYGTDKPDRRFGMELRDFGY 298

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            FV++EF+V   +L      + + +P      +R   + +    +  G  GL +      
Sbjct: 299 AFVNTEFKVVRNVLDEGGSVKGFIVPRFASEMSRKKGEELMARMKELGLGGLIWFKV--- 355

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
                    P  KHL     +        ++         D           R  I +E 
Sbjct: 356 ---EGGITSPHLKHLEKEFRKIAETENMNEEDVCLIAAHTDRNLLNEALGTLRLEIGKER 412

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                  F+  W++DFP++EW+EEE++    H+PFTMP        G+D   ++A  YDL
Sbjct: 413 FSHLARGFDVLWVVDFPYFEWSEEEERFVARHHPFTMPVLET---LGDDYTKVRAKAYDL 469

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NG+E+  G IR H  ++  + F  +G+S+E  + +FG    AF+ G+PPHGGIA G+D
Sbjct: 470 VINGYEVGGGSIRIHRRDIQEKIFKLLGLSEEEAQKKFGFFLEAFRYGVPPHGGIAFGLD 529

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           R+V ++ G  ++REV  FP + N   LL G+P+ V   QLREL +RI E
Sbjct: 530 RLVSIIAGESSIREVIAFPKTGNGVCLLTGAPAEVDERQLRELRIRIEE 578


>gi|294643423|ref|ZP_06721241.1| aspartate--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|292641237|gb|EFF59437.1| aspartate--tRNA ligase [Bacteroides ovatus SD CC 2a]
          Length = 560

 Score =  561 bits (1446), Expect = e-157,   Method: Composition-based stats.
 Identities = 218/567 (38%), Positives = 316/567 (55%), Gaps = 18/567 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
            +RTH+CG+L +SDV   V LSGWV R R  GG+ F+D+RD YGITQ+V N +      E
Sbjct: 1   MFRTHTCGELRISDVNKQVTLSGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEINAELCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ + G V  R ++  NANI TG IE+   ++ +L+ A   P  +    + 
Sbjct: 61  RANKLGREFVIQVTGTVNERFSK--NANIPTGDIEIIVSELNVLNTAMTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR+ +  N+  R ++   +R  + +  FIE  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQP-EFTQIDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DI+ T E + + +F+           F R+ + DA++ YG+DKPDLR  +   
Sbjct: 238 MSFVEQEDIITTFEGMAKHLFKTLRGVELNE-PFQRMSWADAMKYYGSDKPDLRFGMKFV 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS--QGQPGLAY 358
            + +      F VF     V                 R   D + E+ +    G  G+ Y
Sbjct: 297 ELMDIMKGHGFSVFDNAAYVGG-----ICAEGAATYTRKQLDALTEFVKKPQIGAKGMVY 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
              R++  G V     V K       + ++     + GD    ++GD + K      + R
Sbjct: 352 A--RVEADGTVK--SSVDKFYTQEVLQQMKDAFGAKPGDLILILSGDDVMKTRKQLCELR 407

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +  +LG+ + N F   W++DFP +EW+EEE ++   H+PFT P+     +   D  ++
Sbjct: 408 LEMGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDPAAV 467

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G IR H +++  + F  +G + E  E +FG L  AF+ G PPHG
Sbjct: 468 RADAYDMVINGVEVGGGSIRIHDAKLQAKMFEILGFTPEKAEAQFGFLMNAFKYGAPPHG 527

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G+A G+DR V L  G  ++R+   FP 
Sbjct: 528 GLAYGLDRWVSLFAGLDSIRDCIAFPK 554


>gi|297798554|ref|XP_002867161.1| tRNA synthetase class II family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312997|gb|EFH43420.1| tRNA synthetase class II family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 664

 Score =  561 bits (1446), Expect = e-157,   Method: Composition-based stats.
 Identities = 230/598 (38%), Positives = 337/598 (56%), Gaps = 20/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG+L V DVG  VRL GWV   R HGG+ FL++RDH GI QV   PD       + 
Sbjct: 75  RTELCGELSVDDVGKSVRLCGWVALHRVHGGLTFLNLRDHTGIVQVRTLPDEFPEAHGLI 134

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-----VFGE 117
             +R E+V+ ++G V SR  E++N  + TG +E+ A+ +EIL+                +
Sbjct: 135 NDMRLEYVVLVEGTVRSRPNESVNKKMKTGFVEVVAEHVEILNPVRTKLPFLVTTADENK 194

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEG 176
               E IR ++R LDLRR  +  NIV R  ++  +R  +   + FIE  TPIL+ S+PEG
Sbjct: 195 DLIKEEIRLRFRCLDLRRQQMKNNIVLRHNVVKLIRRCLEDRHGFIEIETPILSRSTPEG 254

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR+  G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Q
Sbjct: 255 ARDYLVPSRIQSGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQ 313

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM+F+  +D+L   E+++R VF E      + + F R+ Y DA+ RYG+D+PD R  
Sbjct: 314 LDMEMAFMPMEDMLKLNEDLIRKVFSEIKGIQ-LPDPFPRLTYADAMDRYGSDRPDTRFD 372

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR---AFCDRMNEWARSQGQ 353
           + + +V+  F  S FRVF++ L      +V  +P      +       D  NE  +S G 
Sbjct: 373 LELIDVSNVFTESSFRVFTEALESGGIIKVLCVPLGAKKYSNSALKKGDIYNEAMKS-GA 431

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GL ++  ++ ++G + G+  +   L+         +     GD   F  G         
Sbjct: 432 KGLPFL--KVLDNGEIEGIAALVSSLDSAGKINFVKQCGAAPGDLILFGVGPVTSVNKTL 489

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
              R  +A ++ +I+ +     W+ DFP +EWNE E++++  H+PFT P+         D
Sbjct: 490 DRLRLFVAHDMDLIDHSKHSILWVTDFPMFEWNEPEQRLEALHHPFTAPKPEDMD----D 545

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           L S +A  YD+V NG EI  G +R +  +V  +    +GIS E  E++FG L  A   G 
Sbjct: 546 LPSARALAYDMVYNGVEIGGGSLRIYKRDVQEKVLEIIGISPEEAESKFGYLLEALDMGA 605

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGGIA G+DR+VM+L GA ++R+V  FP +      L  +PS V  +QL++L +R 
Sbjct: 606 PPHGGIAYGLDRMVMMLGGANSIRDVIAFPKTTTAQCALTRTPSEVDPKQLQDLSIRT 663


>gi|308235732|ref|ZP_07666469.1| aspartyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311114716|ref|YP_003985937.1| aspartate--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310946210|gb|ADP38914.1| aspartate--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 598

 Score =  561 bits (1446), Expect = e-157,   Method: Composition-based stats.
 Identities = 222/610 (36%), Positives = 333/610 (54%), Gaps = 33/610 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRTH   ++  + VG  V ++GWV R R HGG+ F+D+RD+ G+ QVV        E A+
Sbjct: 6   YRTHHAVEVTETLVGQNVTIAGWVDRRRDHGGVAFVDVRDNTGLVQVVI----YDEETAR 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFG 116
            +RSE+V+ + G V  R     N ++ TG+IE+ A K+ IL+ ++ LP            
Sbjct: 62  PLRSEFVVQVTGEVRLRPDGNENDHLATGKIEIVANKMTILAKSDALPFQVSTALENESE 121

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +   E +R KYR+LDLRR ++ +N+  R+ +  + R  +   +F E  TP    S+PEG
Sbjct: 122 NKLPSEDVRLKYRYLDLRRPSMQRNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG 181

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARDF+VP+R+  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF Q
Sbjct: 182 ARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQ 240

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEMSF  Q+D++   E V+  +++E   G+ ++    RI + +A+ +YG+DKPDLR  
Sbjct: 241 LDMEMSFASQEDVMAMAERVIAAIWKE--AGHEITLPLPRITWQEAMDKYGSDKPDLRFG 298

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             +  +T+ F ++ FRVF         Y    +   G    R   D   +WA+ +G  GL
Sbjct: 299 NPLIELTDFFKNTPFRVFQAP------YVGAVLFKGGADTPRRQFDAWQDWAKQRGAKGL 352

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           AY+ +   E G +   GPVAK+L+      ++  +  QDGD+ FF AG            
Sbjct: 353 AYVVF--GEDGELK--GPVAKNLSEEERAGLKEAVGAQDGDAVFFAAGSRESSQLLLGAV 408

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGME 467
           R  +A   G+++ + F F W++DFP ++  ++           K    H+PFTMP     
Sbjct: 409 RVELASRAGLLHPDEFAFTWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSADWI 468

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                D     +  YD+VCNG E+  G +R H  ++  +    +GI K   E +FG L  
Sbjct: 469 DKFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGIDKAEAEEKFGFLLE 528

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPH GIA G DR   +L GA ++R+V  FP +    D L G+P+ +S EQ  E 
Sbjct: 529 AFKYGAPPHAGIALGWDRTAAILAGASSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAET 588

Query: 588 GLRIVENPKK 597
           G+       +
Sbjct: 589 GVDYDPEEDE 598


>gi|303232743|ref|ZP_07319428.1| aspartate--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481229|gb|EFL44304.1| aspartate--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 588

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 225/596 (37%), Positives = 330/596 (55%), Gaps = 15/596 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH   TH+CG+L  SDV + V L+GWV   R  GG+IF+DIRD  G TQ+  +P     E
Sbjct: 5   MH---THTCGELTSSDVNAHVVLTGWVWHRRDLGGLIFIDIRDKDGYTQIAIDPVCCSEE 61

Query: 61  I---AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
               A+ +RSEW + I G V  R A+    +  TG IE+ A  I + + +   P  +  +
Sbjct: 62  TYACAQKLRSEWCVQIAGTVRLRPADQQKTSSTTGCIEVLASDITVFNASPTPPFQIEDK 121

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +  E +   YR+LD+RR    + + KR+    ++R       F+E  TP L  S+PEGA
Sbjct: 122 IDLSEDMYLTYRYLDIRRPRTVQTLQKRSDFTFAIRQAFHNHAFMEVETPALFKSTPEGA 181

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RDFLVPSR+ +G+FYALPQ+PQ  KQLLM  G +RY+Q+A CFRDED R+DR P EF Q+
Sbjct: 182 RDFLVPSRIKKGAFYALPQSPQLLKQLLMIGGVERYYQVAKCFRDEDFRADRQP-EFTQV 240

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSFV +DDIL+T+E +L   F +      +     R+ Y DA+  YG+DKPD R  +
Sbjct: 241 DMEMSFVTEDDILHTLEQILHEAFAQVG--VDMPIPLPRMQYWDAMDTYGSDKPDTRFGM 298

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            +HN+T  F  SEF +F+     N           G  G R+  D++ + A+ +G  GLA
Sbjct: 299 EIHNLTSGFTSSEFSLFANAEKENKRICCICAKGAGNWG-RSRIDKLQDVAKKEGAKGLA 357

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +I +   E+G++   G +AK ++      +   ++   GD   F     L         R
Sbjct: 358 WIAF--TEAGDIK--GSIAKFMSQDEIAYLTREMNATAGDLLLFCVDTRLVADEVMGALR 413

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            H+A  LG I  +   F W+++FP + W++E       H PFT+P+         + L I
Sbjct: 414 LHMADALG-ITRSGHAFLWVVNFPLFHWDDERGAYAAEHQPFTLPRCESVEEIKANPLGI 472

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            ++ YD V +G+E   GG+R H  ++ L     +G + E    +FG L  A Q G PP G
Sbjct: 473 GSYTYDFVMDGYEAGGGGMRIHDPKMQLDILELLGFTPERARAQFGFLLDALQYGAPPMG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G A G+DR+ ML+ G +++REV  FP S +  DL+  +P++VS  QLR+L LR+ +
Sbjct: 533 GFALGLDRVCMLICGTESIREVIAFPKSTSGSDLMSAAPASVSEAQLRDLHLRVDK 588


>gi|86739405|ref|YP_479805.1| aspartyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86566267|gb|ABD10076.1| aspartyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 620

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 225/591 (38%), Positives = 316/591 (53%), Gaps = 23/591 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH CGDL    V   V + GWV   R HG  + F+D+RDH GI Q V +          
Sbjct: 30  RTHMCGDLRSDHVDQTVTVCGWVAHRRQHGQSLTFVDLRDHSGIIQAVVDGSV------- 82

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122
            VR+E+VL I G V  R   T N  + TG++EL   ++++LSVA   P P+    +   E
Sbjct: 83  DVRTEYVLRITGTVAVRPEGTANPALATGEVELRDCEVQVLSVATPPPFPLDDRADSVDE 142

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + R  YR+LDLRRD + +N+  R+ ++ +MR  +   +F+E  TP+L  S+PEGAR+F+V
Sbjct: 143 ATRLAYRYLDLRRDRMQRNLRIRSAVLAAMRSALAPLDFVEVETPLLMPSTPEGAREFIV 202

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   GSFYALPQ+PQ +KQLLM  G DRYFQ A C RDED R+DR   EF QLD+EMS
Sbjct: 203 PSRQFPGSFYALPQSPQLFKQLLMVGGTDRYFQFARCLRDEDLRADRQ-YEFTQLDLEMS 261

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+QDD+L+     +       + G        R+ + +A+ R+G DKPDLR  + +  +
Sbjct: 262 FVDQDDVLDVTSAAVLAAARAVTGGPVPP--IERMSWHEAMNRFGVDKPDLRFGMELVEL 319

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T  F  S F+ F+   +V        +P      NR   D +   A+  G  GL ++  R
Sbjct: 320 TAVFAGSGFKAFAGAEAVKG----IRVPGGSASHNRRKLDDLTARAKGLGAKGLVWM--R 373

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           +   G +    PVAK L+      I        GD    +A +    C      RN + +
Sbjct: 374 VGPGGELE--SPVAKFLSAEELAGIVAATAAVAGDLLLLVADEWATTCEVLGQLRNDLGR 431

Query: 423 ELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
                      F W++DFP +   +    +    H+PFT P          D L++++  
Sbjct: 432 PP--AGEGPLRFVWVVDFPLFVGVDPGTGRPKPGHHPFTRPHPDDVDKLETDPLAVRSRA 489

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+ SG IR H S +  + F  +GIS    + RFG     F  G PPHGG A 
Sbjct: 490 YDLVLNGWELGSGSIRIHESGLQQRIFGILGISPAEAKARFGFFLTPFGYGAPPHGGFAV 549

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR+V +L G +N+REV  FP +Q+  D L G+P+ V+  QLRELG+R+V
Sbjct: 550 GIDRLVAILAGEENIREVIAFPKTQSGLDPLTGAPTPVTDRQLRELGVRVV 600


>gi|159473655|ref|XP_001694949.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii]
 gi|158276328|gb|EDP02101.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii]
          Length = 605

 Score =  560 bits (1444), Expect = e-157,   Method: Composition-based stats.
 Identities = 211/601 (35%), Positives = 332/601 (55%), Gaps = 14/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+H CG +  +D+GS V + GWV R R  GG+ F D+RDH G+ QV+  P S   E+   
Sbjct: 10  RSHGCGAVTTADIGSKVTICGWVDRNRDMGGVQFFDVRDHSGLLQVICEPQSVAPEVSRT 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV---AEELPLPVFGER 118
           A  +R+E+V+C+ G++ +R  +  N  I TGQ+E+ A+ ++IL+V   +   P+    E+
Sbjct: 70  ASRLRNEYVVCVKGVLRAR--KDPNPKIPTGQLEVLAESVDILNVVTRSLPFPISEAEEQ 127

Query: 119 EYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEG 176
           E P E  R K R LDLRR  +  N+  R +++  +R  +   + F+E  TPILT S+PEG
Sbjct: 128 EPPKEDTRLKNRVLDLRRPKMAANLRLRHKLLRLIRTFLEDRHGFMEVETPILTRSTPEG 187

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSRV  G +YALPQ+PQ +KQ+LM +G DRY+QIA CFRDED R+DR P EF Q
Sbjct: 188 ARDYLVPSRVQPGEWYALPQSPQLFKQMLMVAGMDRYYQIARCFRDEDLRADRQP-EFTQ 246

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+E+SF++   + + ME ++  VF++      ++  F RI Y +A+ +YG+DKPDLR  
Sbjct: 247 LDIEVSFMDDKALQSLMEELVLQVFDQILGVT-LAAPFRRISYAEAMDKYGSDKPDLRYG 305

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           +   +V+       F+VF+  ++     +   +P      N     + +    +      
Sbjct: 306 LEFVDVSPAVAGCGFKVFAGAVADGGVVKAIRVPDGKRISNTRIKPKGDIANEAVAAGAA 365

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
                R+   G++     + + L+      +      Q GD     AG            
Sbjct: 366 GLASIRVAADGSLDAAKAIKEGLSPEQAAQLMAATGAQPGDLLLLAAGPRDTVHRALDRV 425

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  + ++LG+I        W++DFP +E+N EE +    H+PFT P+    +    D ++
Sbjct: 426 RQLLGRDLGLIKPGDHSLLWVVDFPMFEFNPEEGRYQAIHHPFTAPRPDDWA--SGDYVN 483

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
            +A  YDLV NG EI  G +R +  ++  + F  +G++    +++FG L   F+ G PPH
Sbjct: 484 ARALAYDLVYNGVEIGGGSLRIYRRDIQQKVFELIGLTPAEAQSKFGYLLDCFEYGAPPH 543

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GG+A G+DR+ MLL GA ++R+V  FP +      L G+P+ V+ +QL EL +     PK
Sbjct: 544 GGLAFGLDRLAMLLAGAPSIRDVIAFPKTTQAQCALTGAPAAVADKQLVELSIASTAPPK 603

Query: 597 K 597
           +
Sbjct: 604 Q 604


>gi|296436075|gb|ADH18249.1| aspartyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437003|gb|ADH19173.1| aspartyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|296437936|gb|ADH20097.1| aspartyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140436|gb|ADH97194.1| aspartyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 582

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 231/592 (39%), Positives = 338/592 (57%), Gaps = 14/592 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
           +YRTH C +L +  VG  VRLSGWVHR R HGG++F+D+RD +GITQ+V   +      +
Sbjct: 2   KYRTHKCNELSLDHVGEHVRLSGWVHRYRNHGGVVFIDLRDCFGITQIVCRQEENPELHQ 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
           +   VRSEWVLC++GLV +R     N N++TG IE+    +E+LS A+ LP  +      
Sbjct: 62  LMDQVRSEWVLCVEGLVCARLEGMENPNLVTGSIEVEVSSLEVLSRAQNLPFSISDEHIN 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R  YR+LD+RR  +   ++ R +++ + R  +  + F E  TPIL  S+PEGARD
Sbjct: 122 VNEELRLTYRYLDMRRGDILDRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  G+FYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R+DR P EF Q+DM
Sbjct: 182 YLVPSRIYPGNFYALPQSPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQP-EFTQIDM 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF   +D+   +E ++  +F     G  +   FLR+ Y +A   YGTDKPDLR  + +
Sbjct: 241 EMSFGGPEDLFPVVEELVARLFA--VKGIELKAPFLRMTYQEAKDSYGTDKPDLRFGLRL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            N  E+     F +F   L+     + + +P  G   +R   D   ++ +  G  GL +I
Sbjct: 299 KNCCEYARKFTFSIFLDQLAYGGTVKGFCVP-GGADMSRKQLDIYTDFVKRYGAMGLVWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                   +      VAK  +    + +    + +D D    IA             R  
Sbjct: 358 K-----KQDGGVSSNVAKFASEDVFQEMFEAFEAKDQDILLLIAAPEAVANQALDHLRRL 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+E  + +   + F WI DFP +   +EE ++   H+PFT P     SL  +D  ++++
Sbjct: 413 IARERQLYDSTQYNFVWITDFPLF--AKEEGELCPEHHPFTAPLDEDISLLDSDPFAVRS 470

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+EIASG  R H  ++  + F+ + +S+E V+ +FG    A   G PPH GI
Sbjct: 471 SSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFGFFIDALSFGTPPHLGI 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           A G+DRI+M+L  A+ +REV  FP +Q   DL+M +PS +   QL+ELGL++
Sbjct: 531 ALGLDRIMMVLTRAETIREVIAFPKTQKAGDLMMSAPSEILPIQLKELGLKL 582


>gi|326514634|dbj|BAJ96304.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 676

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 222/596 (37%), Positives = 333/596 (55%), Gaps = 17/596 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R   CG+LG  D G  VRL GWV   R H G+ FL +RD  G+ QV   P+    + +  
Sbjct: 88  RDALCGELGAGDAGRRVRLCGWVALRRSHAGLTFLTLRDSSGMVQVTTLPEYPEVYAVVN 147

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--- 120
            +R E V+ ++G+V  R  E  NA++ TG IE++A ++ +L+             +    
Sbjct: 148 KLRVESVVSVEGVVRLRPTEAFNADMRTGAIEIAADRVSVLNSVTRSLPFPITTADTVTE 207

Query: 121 --PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGA 177
             PE +R ++R LDLRR  +  N+  R ++I  +R  +   + F+E  TPIL+ S+PEGA
Sbjct: 208 RFPEEVRLRFRVLDLRRPQMQSNLRLRHKVIKHIRRYLEDRHDFVEIETPILSKSTPEGA 267

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSRV  G+ +ALPQ+PQ +KQ+LMASGF++YFQIA CFRDED R+DR P EF QL
Sbjct: 268 RDYLVPSRVQPGTCFALPQSPQLFKQMLMASGFEKYFQIARCFRDEDLRADRQP-EFTQL 326

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DME++F   +D+L   E ++  +F+E  +   +   F R+ Y +A+ RYGTD+PDLR   
Sbjct: 327 DMEIAFTSMEDMLKLNEELMIHIFQEVGDIK-LPKCFPRLTYTEAMNRYGTDRPDLRFDW 385

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPG 355
            + + ++ F+ S F+VF+  L      +   +P      +     +   +A     G  G
Sbjct: 386 ELKDASDVFLGSSFKVFADTLENGGVIKALCVPGGAKVFSNTDLKKGTVYAEASKAGAKG 445

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L ++  ++ ++G + G+GP+   L     E +   LD + GD   F  G+          
Sbjct: 446 LPFL--KVMDNGELEGVGPLVSSLKPEKKEHLLELLDAKAGDLILFALGEQSTANQILGR 503

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  IA +L +I+ +     W+ DFP +EWN +E++ +  H+PFT P         NDL 
Sbjct: 504 LRLFIAHKLEVIDTSAHSILWVTDFPMFEWNSDEQRYEALHHPFTAPNPEDM----NDLP 559

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           S +A  YD++ NG EI  G +R + S+V  + F  +GIS E  E +FG L   F  G PP
Sbjct: 560 SARALAYDMIYNGVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDMGAPP 619

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGGIA G+DR+VMLL    ++R+V  FP +      L  +PS V  +QL++LGLR 
Sbjct: 620 HGGIAYGLDRLVMLLARESSIRDVIAFPKTTTAQCSLTKAPSPVDPQQLKDLGLRT 675


>gi|254796834|ref|YP_003081671.1| aspartyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254590060|gb|ACT69422.1| aspartyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 598

 Score =  560 bits (1442), Expect = e-157,   Method: Composition-based stats.
 Identities = 277/591 (46%), Positives = 381/591 (64%), Gaps = 9/591 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR    G++    VG  ++L+GWV R R HG I+F+D+RD YG+ Q+VA+     FE  +
Sbjct: 16  YRDCGIGEISEEHVGEVIKLAGWVFRKRDHGAILFIDLRDAYGVIQLVASESIDGFEELR 75

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V  E V+ + GLV +RS ETIN ++  G+IE+      + S A  LPL V  E  YPE 
Sbjct: 76  CVSCESVITVQGLVSARSPETINNSLQNGKIEVIVNSWSVNSHASSLPLQVDSEFPYPEE 135

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YR+LDLRRD L KNI+ R++II+ +R  M  E F E  TPILTA+SPEGARD++VP
Sbjct: 136 TRLRYRYLDLRRDKLKKNIILRSKIISEIRKFMEGEGFTEFQTPILTATSPEGARDYIVP 195

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R+DR PGEFYQLD+EMSF
Sbjct: 196 SRIHKGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDSRADRSPGEFYQLDVEMSF 255

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V Q+++   ME +L  +F ++SN   VS +F RI Y++++  YGTDKPDLRNPI + + T
Sbjct: 256 VGQEEVFELMERLLTHIFSKYSNRK-VSGSFERIPYEESMLLYGTDKPDLRNPIKIADFT 314

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYIFWR 362
             F  S   +F++ +           P  G    R F D M ++A ++    GLAY+ + 
Sbjct: 315 SIFGESGLAIFAEQIQKGAVVRGIPAPNCGNK-PRKFFDEMIKYATTELCARGLAYLCF- 372

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             +SG     GP+AK L+      I  +  +   D+ FF           A   R  +  
Sbjct: 373 --DSGI--PKGPIAKFLSFEQISEIAKKACLSKDDAIFFSCDAEQAATKIAGAVRKRLGL 428

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +I+   ++FCWI+DFP++E +E   K+DF+HNPF+MP+GG+E+L G D L + + QY
Sbjct: 429 ELSLIDNTEYKFCWIVDFPYFELDETTGKLDFSHNPFSMPKGGLEALNG-DPLKVVSQQY 487

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+VCNG E++SG +RNH  E+M +AF  +G+ KE V   FG L  +FQ G+PPH GIA G
Sbjct: 488 DIVCNGVELSSGAVRNHKPEIMYRAFDMLGLDKEYVNRVFGALIESFQYGVPPHAGIAPG 547

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           IDR+VML+   +N+REV  FPM+Q   D LM +PS V  E+L E G+++VE
Sbjct: 548 IDRMVMLIAEEENIREVIAFPMNQRCEDSLMRAPSPVETERLLECGVKLVE 598


>gi|126642918|ref|YP_001085902.1| aspartyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 554

 Score =  559 bits (1440), Expect = e-157,   Method: Composition-based stats.
 Identities = 212/561 (37%), Positives = 313/561 (55%), Gaps = 9/561 (1%)

Query: 41  IRDHYGITQVVANPDSA-CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQ 99
           +RD  G+ QVV +PD+   F  A   RSE+VL I G V  R   T N N+++GQIE+  +
Sbjct: 1   MRDRDGLVQVVIDPDTPEAFATADKARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGK 60

Query: 100 KIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA 158
           +IE+L+ +E  P P+  +     E  R KYRFLD+RR  + + +  R+++ N +R  +  
Sbjct: 61  EIEVLAASETPPFPLNDDTINVSEEHRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYLDD 120

Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
             F++  TPILT ++PEGARD+LVPSRV  GSFYALPQ+PQ +KQLLM  G DRY+QIA 
Sbjct: 121 HGFLDVETPILTRATPEGARDYLVPSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAK 180

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
           CFRDED R+DR P EF Q+D+E SF+  DDI++ ME +   +F +          F R+ 
Sbjct: 181 CFRDEDLRADRQP-EFTQIDIETSFLNDDDIMDLMEGMTIKLFNDLLGVKFEK--FRRMP 237

Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
           Y +A+R Y +DKPDLR P+ + +V +     EF+VF+       G          G   R
Sbjct: 238 YSEAMRDYASDKPDLRIPLKLVDVADLMQEVEFKVFAGPAKDPKGRIAALRVPGAGSLTR 297

Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398
           +  D   ++    G  GLAYI     E G      P+ K +  +  + +  R+  ++GD 
Sbjct: 298 SQIDEYTKFVGIYGAKGLAYIKVNEIEKGIEGLQSPIVKFIEPIVMQ-LLERVGAENGDI 356

Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
            FF A             R  I  +L +  C  +   W++DFP +E  ++  K    H+P
Sbjct: 357 VFFGADKAKIVNDAMGALRVKIGHDLNLATCE-WAPLWVVDFPMFEETDD-GKWTSVHHP 414

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           FT+P+  +E +K ++     +  YD+V NG E+  G +R +  E+    F  +GIS E  
Sbjct: 415 FTLPKSSVEDVK-SNPGEALSVAYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGISDEEA 473

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
           E +F  L  A + G PPHGG+A G+DR+VML+ GA ++R+V  FP ++     L  +P+ 
Sbjct: 474 EEKFSFLLNALRYGAPPHGGLAFGLDRLVMLMTGATSIRDVIAFPKTKTAECPLTQAPAP 533

Query: 579 VSVEQLRELGLRIVENPKKIL 599
           V   QLR+LG+R+ E  KK  
Sbjct: 534 VEANQLRDLGIRLREQQKKEA 554


>gi|226356065|ref|YP_002785805.1| aspartyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|259511855|sp|C1CV34|SYD_DEIDV RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226318055|gb|ACO46051.1| putative aspartate--tRNA ligase (aspartyl-tRNA synthetase)
           [Deinococcus deserti VCD115]
          Length = 577

 Score =  558 bits (1439), Expect = e-157,   Method: Composition-based stats.
 Identities = 221/594 (37%), Positives = 323/594 (54%), Gaps = 20/594 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RT   G L  + +   V L GWV+R R  GG+IFL++RD  G+ QV   PDS  F  A
Sbjct: 1   MKRTALIGQLSTTHLDQAVTLQGWVNRRRDLGGLIFLELRDRSGLVQVQVEPDSPAFAQA 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +R+E+V  ++G+  +R              E+ A ++++L+ A+  P  +       E
Sbjct: 61  DQLRAEYVAEVEGIYRARPENQRKGGAA--DYEVIASRVKVLNTAKTPPFELDKGESVAE 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LDLRR  + ++++ R+R + ++   + +  F++  TP+LT S+PEGARDFLV
Sbjct: 119 DIRLKYRYLDLRRPEMQRHLLLRSRAMAAVTAFLDSSGFVQVETPMLTKSTPEGARDFLV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N G FYALPQ+PQ +KQLLM +G+DRY+Q A CFRDED R+DR P +F QLDMEMS
Sbjct: 179 PSRLNPGEFYALPQSPQLFKQLLMIAGYDRYYQFARCFRDEDLRADRQP-DFTQLDMEMS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVEQDD+L   E ++  VF+   + + +   F R+ Y DA+ RYG+DKPDLR    + +V
Sbjct: 238 FVEQDDVLELQEGLMAHVFKATLDVD-LPRPFPRLSYFDAMDRYGSDKPDLRFESALVDV 296

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+ F   EF+ F+   SV                 R   D +   A+  G  GLA++   
Sbjct: 297 TDLFQGGEFKAFAAAQSVK--------VLAAAELTRKQIDELERVAKQNGAGGLAWLKRD 348

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D     +  G ++K +       +  R  +QDG +  F AGD  K  +     R  +  
Sbjct: 349 GD-----SFTGGISKFVGS-VAPQLIKRSGVQDGGTLLFAAGDWKKAVTALGAVRLAVRD 402

Query: 423 ELGIINCN-CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN-DLLSIKAF 480
              + +    F   W+ DFP  E++E+     + H+PFT P      L G      I+A 
Sbjct: 403 LFDLTSSGPRFHVSWVTDFPQLEFDEDSGTWTYMHHPFTAPHPDDAELFGTLRQGEIRAQ 462

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NGFE+  G +R H   V  + F  +G ++     +FG    A + G PPHGGIA
Sbjct: 463 AYDLVLNGFEVGGGSVRIHDPAVQTKMFEAIGFTEAQAREKFGFFMDALEYGTPPHGGIA 522

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            G DR+VM++ GA ++REV  FP +    DL+  +PS V   QL ELG+ ++  
Sbjct: 523 WGFDRLVMVMSGASSIREVIAFPKNNRGADLMAEAPSLVDDAQLAELGVGVLSP 576


>gi|157364498|ref|YP_001471265.1| aspartyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166979994|sp|A8F7R7|SYD_THELT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157315102|gb|ABV34201.1| aspartyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 585

 Score =  558 bits (1437), Expect = e-156,   Method: Composition-based stats.
 Identities = 224/587 (38%), Positives = 340/587 (57%), Gaps = 14/587 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L + DVG  V L+GW+ R+R  GG+ FL +RD YG TQ++ + +        +
Sbjct: 3   RTHTCGELTIKDVGKKVILAGWIDRIRDLGGVKFLMLRDRYGQTQIILSQNCQI-----N 57

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-ES 123
           +R E V+ I+G+V  R  ETIN +++TG+IE+ A+K+ + S  E+      GE + P E 
Sbjct: 58  LRRESVVQIEGVVQKRPEETINKDLLTGEIEVFAEKVNVFSSPEKDLPFYPGETKLPAEE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR KYR++DLRR  +   I+ R ++   +R  +    FIE  TP LT S+PEGARDFLVP
Sbjct: 118 IRLKYRYIDLRRKEVSDRIITRHKVTQCIRNYLSKNGFIEVETPFLTKSTPEGARDFLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+  G+FYALPQ+PQ +KQLLM  G DRYFQ+  CFRDED R+DR P EF Q+D+EMSF
Sbjct: 178 SRLKPGTFYALPQSPQLFKQLLMIGGIDRYFQVVRCFRDEDLRADRQP-EFTQIDIEMSF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
              DD+L   E +++ +F+E    + +     R+ Y++ + +YG+DKPD R  +   +++
Sbjct: 237 NTMDDVLEITEGMIKHLFKEVLQVD-LPGKLDRLTYNECMNKYGSDKPDRRIGMEFFDLS 295

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +HF   E+   +  LS     + + +       +R   D +NE A+S G  G+ +  +  
Sbjct: 296 KHFKTCEYHAINAELSSGGVVKGFVVRDFANKMSRKLADELNEIAKSLGGGGILWFSF-- 353

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
                 +  G  AK+L   N  ++   L +   D C   AG      +   + R  + + 
Sbjct: 354 --DSPESIKGAGAKYLQK-NYNSVAKELSINYNDVCVLSAGKIDIVNTVLGEVRKILGER 410

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQY 482
                   F+  W+ DFP +E++EEE +    H+PFTMP    ++  K +DL  I+A  Y
Sbjct: 411 YFSDLRKGFDIFWVTDFPMFEYSEEENRFVAQHHPFTMPNLDDLKKYKNSDLSKIRAQSY 470

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NGFE+ SG IR H +E+  + F  + +++E V+ +FG L  AFQ G PPHGGIA G
Sbjct: 471 DIVINGFEVGSGSIRIHDAELQREIFKLMRLTEEEVKLKFGFLLEAFQYGAPPHGGIALG 530

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           +DR+  ++ G   +REV  FP + +    L G+P  V+ +QL EL +
Sbjct: 531 LDRLTAIICGVPTIREVIAFPKTSSGICPLTGAPDVVNQKQLDELKI 577


>gi|255562164|ref|XP_002522090.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223538689|gb|EEF40290.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 668

 Score =  558 bits (1437), Expect = e-156,   Method: Composition-based stats.
 Identities = 231/597 (38%), Positives = 338/597 (56%), Gaps = 20/597 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG+L V+DVG  V L GWV   R HGG+ FL++RDH G  QV   PD       I 
Sbjct: 80  RTGLCGELSVNDVGKRVLLCGWVALHRVHGGLTFLNLRDHTGTVQVTTLPDEFPDAHSII 139

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-----VFGE 117
             +R E+V+ ++G+V SR  E++N  + TG +E++A+ ++IL+                +
Sbjct: 140 NDLRLEYVVAVEGVVRSRPTESVNKKMKTGLVEVAAENVQILNAVRTKLPFLVTTADDAK 199

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEG 176
               E IR ++R LDLRR  ++ N++ R R++  +R  +     F+E  TPIL+ S+PEG
Sbjct: 200 DSVKEEIRLRFRCLDLRRQQMNFNMMLRHRVVKLIRRYLEDVYGFVEIETPILSRSTPEG 259

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSRV  G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Q
Sbjct: 260 ARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQ 318

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDME++F   +D+L   E+++R VF E      + N F R+ Y +A+ RYG+D+PD R  
Sbjct: 319 LDMELAFTPLEDMLKLNEDLIRKVFLEIKGVQ-LPNPFPRLTYAEAMSRYGSDRPDTRFD 377

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR---AFCDRMNEWARSQGQ 353
           + + +V++ F+ S FRVF+  L+     +V  +P+     +       D  NE A   G 
Sbjct: 378 LELIDVSDIFLESPFRVFADSLNKGGIIKVLCVPSGAKSYSNTALKKGDIYNE-ATKSGA 436

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GL ++  ++ + G V G+  +   L+ +  E +  R     GD   F  G         
Sbjct: 437 KGLPFL--KVLDDGEVEGIAALVSSLDPMKKEELLRRCSAGPGDLILFAVGHYASVNKTL 494

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
              R  IA E+G+I+ +     W+ DFP +EWN+ E++++  H+PFT P          D
Sbjct: 495 DRLRMFIANEMGLIDHSRHSILWVTDFPMFEWNDTEQRLEALHHPFTAPNPEDM----ED 550

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           L S +A  YD+V NG EI  G +R +  E+  +    VGIS E  E +FG L  A   G 
Sbjct: 551 LSSARALAYDMVYNGVEIGGGSLRIYKREIQQKVLEIVGISAEQAEEKFGYLLEALDMGA 610

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           PPHGGIA G+DR+VMLL  A ++R+V  FP +      L  +PS V  +QL++L   
Sbjct: 611 PPHGGIAYGLDRLVMLLADANSIRDVIAFPKTTTAQCALTRAPSEVGPQQLKDLSFN 667


>gi|219681679|ref|YP_002468065.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682234|ref|YP_002468618.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471370|ref|ZP_05635369.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254781721|sp|B8D9A6|SYD_BUCA5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781722|sp|B8D7K8|SYD_BUCAT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219621967|gb|ACL30123.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624522|gb|ACL30677.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086054|gb|ADP66136.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086627|gb|ADP66708.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087731|gb|ADP67810.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 586

 Score =  558 bits (1437), Expect = e-156,   Method: Composition-based stats.
 Identities = 216/591 (36%), Positives = 330/591 (55%), Gaps = 7/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           RT  CG++ +S V   V+L GWVH+VR  G  IF+D+RD+ G+ QV+    +   F+ A 
Sbjct: 2   RTKYCGNIRISHVNKKVKLCGWVHKVRNLGQFIFVDMRDYTGLVQVIFELKNYTIFKKAL 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R  +  N  I TG+IE+ A  + IL+ ++   LP+   +E  + 
Sbjct: 62  NLRNEFCIQVFGTVQKREKKNQNIKIRTGEIEILANVLNILNTSKS--LPLNFTQENNDD 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLR   + +N+  R +I   +R  M  +NF++  TPILT S+PEGARD+LVP
Sbjct: 120 SRLKYRYLDLRSFDILENLKIRNKITYLIRNFMTKKNFLDIETPILTKSTPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G FYALPQ+PQ +KQ+LM SG DRY+QI  CFRDED RSDR P EF Q+D+E+SF
Sbjct: 180 SRNHYGKFYALPQSPQLFKQILMISGIDRYYQIVKCFRDEDLRSDRQP-EFTQIDIEVSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    I N +EN+++ ++ E  N N     F +I + +A+++YG+DKPDLRNPI + +V+
Sbjct: 239 MSAKKIRNLVENLIKKLWLEIRNIN--LKKFPQISFHEAMKKYGSDKPDLRNPIEIIDVS 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
             F   +F  F  +             +KG   +R   D   ++ +      L YI  + 
Sbjct: 297 NIFKDKKFISFFNLNPQKNNRIALLCISKGAHLSRKKIDDYTKYVQRFDAKKLFYIKIKE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G +     +   L+ +  + I  +   ++GD  F IA             R  I  +
Sbjct: 357 CKLGCLGIHSSIKNILDEIILKEIIEKSQSKNGDILFLIADQEHIVNKSLGMLRLKIGID 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I   N +E  WI++FP ++ +  +  +   H+PFT  +     +  N      +  YD
Sbjct: 417 LNITKKNRWEPLWIVNFPMFDKD-IQGNLSSVHHPFTAVKNMDREILKNSPDLAISDSYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ NG+EI  G +R H   +  Q F  +GI K +   +FG L  A + G PPH GIA G+
Sbjct: 476 LIINGYEIGGGSVRIHDVNMQKQVFDIIGIKKSMQNEKFGFLIEALKYGAPPHAGIALGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DRIVMLL  +KN+R+V  FP + +   L+  SPSTV    L+EL ++ ++ 
Sbjct: 536 DRIVMLLTNSKNIRDVIAFPKTTSATCLMTNSPSTVDNLLLQELAIKHLKK 586


>gi|46190374|ref|ZP_00206443.1| COG0173: Aspartyl-tRNA synthetase [Bifidobacterium longum DJO10A]
          Length = 586

 Score =  558 bits (1437), Expect = e-156,   Method: Composition-based stats.
 Identities = 222/601 (36%), Positives = 332/601 (55%), Gaps = 33/601 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             + VG  V L+GWV R R HGG+ F+D+RD  G+ QVV        ++A+ +RSE+V+ 
Sbjct: 2   TEALVGQKVTLAGWVDRRRDHGGVAFIDLRDSTGLVQVVI----YDEDMARPLRSEFVIQ 57

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFGEREYPESIR 125
           I G V  R     N ++ TG+IE+ A+ IEIL+ ++ LP             +   E +R
Sbjct: 58  ITGEVRLRPDGNENTHLATGKIEVVAETIEILAKSDALPFQVSTALENESENKLPGEDVR 117

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            KYR+LDLRR ++  N+  R+ +  + R  +   +F E  TP    S+PEGARDF+VP+R
Sbjct: 118 LKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEGARDFVVPAR 177

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           +  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF QLDMEM++V+
Sbjct: 178 LVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQLDMEMAYVD 236

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           Q+D++   E V+  +++  S G  V     RI + DA+ +YG+DKPDLR    +  +TE+
Sbjct: 237 QEDVMAMTEKVIAAIWK--SAGYEVQLPLPRITWKDAMDKYGSDKPDLRFGNPLVELTEY 294

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
           F ++ FRVF         Y    +   G    R   D   +WAR +G  GLAY+ +   E
Sbjct: 295 FKNTPFRVFQAP------YVGAVVFKGGAATPRRQFDAWQDWARQRGAKGLAYVVF--GE 346

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
           +G +   GPVAK+L+      +R  +  ++GD+ FF AG            R  +A   G
Sbjct: 347 NGELK--GPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESAQLLLGAVRVELASREG 404

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGMESLKGNDLLS 476
           +++   F F W++DFP ++  ++           K    H+PFTMP          D   
Sbjct: 405 LLDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWIDKFDKDPEH 464

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  YD+VCNG E+  G +R H  ++  +    +GI+KE  + +FG L  AF+ G PPH
Sbjct: 465 AMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGFLLEAFKYGAPPH 524

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+A G DR V +L GA ++R+V  FP +    D L G+P+ +S EQ  E G+    +  
Sbjct: 525 AGLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAETGVDYDPDAD 584

Query: 597 K 597
           +
Sbjct: 585 E 585


>gi|189218098|ref|YP_001938740.1| Aspartyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|238692082|sp|B3DX01|SYD_METI4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189184956|gb|ACD82141.1| Aspartyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 600

 Score =  557 bits (1436), Expect = e-156,   Method: Composition-based stats.
 Identities = 246/601 (40%), Positives = 358/601 (59%), Gaps = 11/601 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M  YRTH C +L ++ VG   +L GWVH  R HGG++F+D+RD  GITQVV +P  D   
Sbjct: 6   MKGYRTHHCNELNLALVGHKAKLCGWVHSKRDHGGLLFIDLRDREGITQVVFHPEKDPPL 65

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F  AK +++E+V+ ++G V+ R A T NA+I TG+IEL A+ +EIL+ ++ LP  +  + 
Sbjct: 66  FAKAKQLKNEFVVKVEGKVVERPAGTKNASIPTGEIELEAESLEILNPSQPLPFNLDEDI 125

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  E +R  +RFLDLRR  +   +  R  + + +R  +  E F+E  TPIL+ S+PEGAR
Sbjct: 126 E-NEELRLSFRFLDLRRKKILNCLKVRHLVSSVVREYLSREGFLEVETPILSKSTPEGAR 184

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR++ G FYALPQAPQQYKQLLM +G D+YFQIA CFRDED RSDR P EF Q+D
Sbjct: 185 DFLVPSRLSPGKFYALPQAPQQYKQLLMVAGIDKYFQIARCFRDEDLRSDRQP-EFTQID 243

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SFVE +DI+  +E +++ +F +      +S  F+R+ Y +A+  YG+DKPDLR    
Sbjct: 244 LEASFVEVEDIMKWVEEMIQLIFLKVLGIE-LSLPFVRLTYSEALDNYGSDKPDLRIEWQ 302

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +V   F +++F++F  ++      +      +    N +  + +   A S G  GLA+
Sbjct: 303 IQDVGTVFKNTQFKLFRDVIEKGGVIKALNAKGRAPMVNSSALEELVGIATSMGAKGLAH 362

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I        N     P+ K  +    + +   L M+  D   F AG   + C      R 
Sbjct: 363 IRVE-----NQEWKSPIVKFFSSEERKELERLLRMEPSDLVLFSAGPREQACLILGKIRL 417

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL-LSI 477
           H+A+    I  N ++F WI DFP +E++  E+K +  H+PFT P     +        +I
Sbjct: 418 HLAEMTQGIPGNQWKFAWITDFPLFEYSPLEQKWNSVHHPFTRPHPEDLTKLNEGKYDAI 477

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD+V NG E+  G +R +  E+  + FS +GI KE  E  FG L +AFQ G PPHG
Sbjct: 478 RALAYDIVLNGVELGGGSLRIYEKELQEKVFSILGIGKERQELLFGHLLKAFQYGAPPHG 537

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           GIA G+DR VMLL G++++REV  FP +++  DLL  SPS V  +QL+EL +++     K
Sbjct: 538 GIALGLDRFVMLLTGSESLREVIAFPKNRHGVDLLTQSPSEVDYQQLKELNIQLSFPSIK 597

Query: 598 I 598
           I
Sbjct: 598 I 598


>gi|311087210|gb|ADP67290.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 586

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 215/591 (36%), Positives = 329/591 (55%), Gaps = 7/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           RT  CG++ +S V   V+L GWVH+VR  G  IF+D+RD+ G+ QV+    +   F+ A 
Sbjct: 2   RTKYCGNIRISHVNKKVKLCGWVHKVRNLGQFIFVDMRDYTGLVQVIFELKNYTIFKKAL 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R  +  N  I TG+IE+ A  + IL+ ++   LP+   +E  + 
Sbjct: 62  NLRNEFCIQVFGTVQKREKKNQNIKIRTGEIEILANVLNILNTSKS--LPLNFTQENNDD 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLR   + +N+  R +I   +R  M  +NF++  TPILT S+PEGARD+LVP
Sbjct: 120 SRLKYRYLDLRSFDILENLKIRNKITYLIRNFMTKKNFLDIETPILTKSTPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G FYALPQ+PQ +KQ+LM SG DRY+QI  CFRDED RSDR P EF Q+D+E+SF
Sbjct: 180 SRNHYGKFYALPQSPQLFKQILMISGIDRYYQIVKCFRDEDLRSDRQP-EFTQIDIEVSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    I N +EN+++ ++ E  N       F +I + +A+++YG+DKPDLRNPI + +V+
Sbjct: 239 MSAKKIRNLVENLIKKLWLEIRNIT--LKKFPQISFHEAMKKYGSDKPDLRNPIEIIDVS 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
             F   +F  F  +             +KG   +R   D   ++ +      L YI  + 
Sbjct: 297 NIFKDKKFISFFNLNPQKNNRIALLCISKGAHLSRKKIDDYTKYVQRFDAKKLFYIKIKE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G +     +   L+ +  + I  +   ++GD  F IA             R  I  +
Sbjct: 357 CKLGCLGIHSSIKNILDEIILKEIIEKSQSKNGDILFLIADQEHIVNKSLGMLRLKIGID 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I   N +E  WI++FP ++ +  +  +   H+PFT  +     +  N      +  YD
Sbjct: 417 LNITKKNRWEPLWIVNFPMFDKD-IQGNLSSVHHPFTAVKNMDREILKNSPDLAISDSYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ NG+EI  G +R H   +  Q F  +GI K +   +FG L  A + G PPH GIA G+
Sbjct: 476 LIINGYEIGGGSVRIHDVNMQKQVFDIIGIKKSMQNEKFGFLIEALKYGAPPHAGIALGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DRIVMLL  +KN+R+V  FP + +   L+  SPSTV    L+EL ++ ++ 
Sbjct: 536 DRIVMLLTNSKNIRDVIAFPKTTSATCLMTNSPSTVDNLLLQELAIKHLKK 586


>gi|307299322|ref|ZP_07579123.1| aspartyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915118|gb|EFN45504.1| aspartyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 588

 Score =  556 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 226/580 (38%), Positives = 343/580 (59%), Gaps = 11/580 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEI 61
           + RTH+CG+L  SD G+ V L+GWV R+R  GGI F+ +RD YG TQVV +P D+  + +
Sbjct: 2   KKRTHTCGELRASDTGTVVTLNGWVDRIRDLGGIKFVQVRDRYGFTQVVFDPQDNELYNM 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  + +E+ + + G V  R  + IN  + TG+IE+ A ++ ILS AE  P+ +  + E  
Sbjct: 62  ALKLGNEFCISVTGSVRKRPDDAINLRLPTGEIEIVASEMGILSDAEVPPIYINIDEESA 121

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +  +YR+LDLRR  + +NI+ R R + ++R  +    F++  TPIL  S+PEGARDFL
Sbjct: 122 EEMHLRYRYLDLRRPKMQRNILTRHRFVQAVREYLNNNGFVDVETPILGKSTPEGARDFL 181

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+  G FYALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+EM
Sbjct: 182 VPSRLKAGKFYALPQSPQIFKQLLMVAGFDRYYQIAKCFRDEDFRADRQP-EFTQIDLEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF +++D+ +  E +++  FE+ ++ +  S  F R  Y + +  YG+DKPD R  + +H+
Sbjct: 241 SFADEEDVFSMTEGLMKYAFEKAASADI-STPFRRFTYQEVVEFYGSDKPDTRYGMKIHD 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T  F  + F+V S  +      + + +  K    +R   D    +A+  G  GL ++  
Sbjct: 300 ITSIFEKTAFKVISDSIDKGEKVKGFIVENKADRFSRKKLDEYTAFAKESGLGGLMWLKV 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D          + KH       ++       + D   F  G+ L         RN I 
Sbjct: 360 EGD-----GLKSSILKHC-PEELSSLVSLFAANENDLILFSLGEGLPLSKALGQMRNKII 413

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAF 480
           +E    +   FEF W+ DFP + +NEEE++I+  H+PFTMP    +E    +D L +++ 
Sbjct: 414 KE-EEFSVEGFEFLWVTDFPMFSYNEEEQRIEAEHHPFTMPDLEDLEKYGESDPLKVRSK 472

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+EIASG +R H  ++  + F  +G+S+E    +FG L  AF+ G PPH GIA
Sbjct: 473 AYDLVLNGYEIASGSVRIHRRDIQSRVFDLIGLSREEATEKFGYLLEAFKYGPPPHAGIA 532

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
            G+DRI+ +++GA+++REV  FP   +  DL+  +PS VS
Sbjct: 533 PGLDRIIAIIVGAQSIREVIAFPKVASGADLMTSAPSEVS 572


>gi|330444099|ref|YP_004377085.1| aspartyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807209|gb|AEB41382.1| aspartyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 584

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 227/594 (38%), Positives = 334/594 (56%), Gaps = 14/594 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FE 60
           RYRTH C +L +  +G  VRLSGWVHR R HGG++F+D+RD YGITQ+V   +       
Sbjct: 2   RYRTHHCNELSLDHLGEQVRLSGWVHRYRNHGGVVFIDLRDRYGITQIVCREEDNADLHR 61

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ERE 119
              +VRSEWVL ++G V +R +   N N+ TG+IE+   ++++LS ++ LP  +      
Sbjct: 62  RLDAVRSEWVLAVEGKVCARLSGMENLNLATGKIEVEIHQLQVLSKSQNLPFSIADEHIH 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +YR+LD+RR  +   ++ R +++ + R  M ++ FIE  TP+L  S+PEGARD
Sbjct: 122 VNEELRLQYRYLDMRRGEILDRLICRHQVMLACRSYMHSQGFIEVVTPVLGKSTPEGARD 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  G FYALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D+
Sbjct: 182 YLVPSRIYPGKFYALPQSPQLFKQLLMIGGLDRYFQIATCFRDEDLRADRQP-EFAQIDI 240

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSF +  D+   +E ++  +F     G  +S    R+ Y DA   YGTDKPDLR  + +
Sbjct: 241 EMSFGDPQDLFPIIEELIVELFA--VKGIKISLPLPRMTYQDAKDFYGTDKPDLRFDLRL 298

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +  +H     F +F   L+     + + +P  G   +R   D   E+ +  G  GL +I
Sbjct: 299 KDCRKHAERFSFSIFLDQLAQGGKIKGFCVP-GGADISRKQLDIYTEFVKRYGAMGLVWI 357

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                          VAK  +     A+    + +D D    IA             R  
Sbjct: 358 K-----KQEGGISSNVAKFASEEVFNAMFEEFEAKDQDMLLLIAAQESVANQALDHLRRR 412

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA+E  + +   + F WI DFP +    E+ ++   H+PFT P      L  +  LS+++
Sbjct: 413 IAKERQLYDETQYNFVWITDFPLFSL--EDGQLSSEHHPFTAPLEEDIPLLEDSPLSVRS 470

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+EIASG  R H +++  + F+ + +S E ++ +FG    A   G PPH GI
Sbjct: 471 SSYDLVLNGYEIASGSQRIHNADLQSKIFTLLKMSPESIKEKFGFFIEALSFGTPPHLGI 530

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DRIVM+L  A+ +REV  FP +Q   DL+M +PS +   QL+EL +++  
Sbjct: 531 ALGLDRIVMVLTQAEGIREVIAFPKTQKAADLMMEAPSEIMTSQLKELHIKVTS 584


>gi|150021495|ref|YP_001306849.1| aspartyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|166225440|sp|A6LNG3|SYD_THEM4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|149794016|gb|ABR31464.1| aspartyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 581

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 229/592 (38%), Positives = 344/592 (58%), Gaps = 22/592 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YRTH+CG+L   DV   V LSGWV R+R  GGI F+ +RD YG TQ+V NP+S  +EI+
Sbjct: 1   MYRTHNCGELRKKDVEKEVILSGWVDRIRDLGGIKFIILRDRYGKTQLVVNPNSPAYEIS 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +  EWV+ + G V+ R  ET    ++TG+IE+   KI++LS ++    P +      E
Sbjct: 61  QELGREWVIQVYGKVLERPDETK-TEMVTGEIEVEVNKIKVLSKSD--VPPFYPGENVSE 117

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR++DLR + + KN++ R ++  + R  +   +F+E  TP LT S+PEGARDFLV
Sbjct: 118 DLRLKYRYIDLRDERMQKNLIIRHKMAQAAREFLNKHDFLEVETPYLTKSTPEGARDFLV 177

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+ +G FYALPQ+PQ +KQ+LM SGFDRY+Q A CFRDED R+DR P EF Q+D+EMS
Sbjct: 178 PSRLQKGKFYALPQSPQLFKQILMVSGFDRYYQFARCFRDEDLRADRQP-EFTQIDIEMS 236

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+ D+IL+ ME+  R VF +      +   F R+ Y++A+  YG+DKPD R  + + + 
Sbjct: 237 FVKMDEILDLMESFARFVFGKVG--IKLPEKFDRLSYEEAMELYGSDKPDRRYGMQLQDF 294

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T +FV++EF+V   +L  +   + +         +R    +  E+ +  G  GL +    
Sbjct: 295 TNYFVNTEFKVIKNVLERSGSVKGFITTIP---ISRKIASQFEEFVKQYGLGGLLWFKL- 350

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIA 421
                +   + P AK L     + ++   ++  G      A +  +   +     R  + 
Sbjct: 351 -----DDEIVSPTAKFLKESYKKIVKE-YNLDKGSVVLLAAHENREILNTALGALRLKVG 404

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +E        F+  WI+DFPF EWNEEE + +  H+PFTMP+          L  IKA+ 
Sbjct: 405 KEYFNELEKVFDALWIVDFPFLEWNEEESRFEARHHPFTMPKN-----LEQKLEDIKAYA 459

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD++ NG EI  G IR H SEV  + F  +G+++E    +FG    A + G+PPHGGIA 
Sbjct: 460 YDMILNGMEIGGGSIRIHDSEVQKRVFEIIGLTEEEANEKFGFFISALKYGVPPHGGIAF 519

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           G DR+V +     ++R+V  FP + +    L G+PSTV  +QL+EL ++I +
Sbjct: 520 GFDRMVSIAANVASIRDVIAFPKTSSGICQLTGAPSTVEEKQLKELSIQIFK 571


>gi|15616925|ref|NP_240138.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134956|sp|P57401|SYD_BUCAI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|25293054|pir||H84966 aspartate-tRNA ligase (EC 6.1.1.12) [imported] - Buchnera sp.
           (strain APS)
 gi|10038990|dbj|BAB13024.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 586

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 215/591 (36%), Positives = 330/591 (55%), Gaps = 7/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAK 63
           RT  CG++ +S V   V+L GWVH+VR  G  IF+D+RD+ G+ QV+    +   F+ A 
Sbjct: 2   RTKYCGNIRISHVNKKVKLCGWVHKVRNLGQFIFVDMRDYTGLVQVIFELKNYKIFKKAL 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++R+E+ + + G V  R  +  N  I TG+IE+ A  + IL+ ++   LP+   +E  + 
Sbjct: 62  NLRNEFCIQVFGTVQKREKKNQNIKIRTGEIEILANVLNILNTSKS--LPLNFTQENNDD 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLR   + +N+  R +I   +R  M  +NF++  TPILT S+PEGARD+LVP
Sbjct: 120 SRLKYRYLDLRSFDILENLKIRNKITYLIRNFMTKKNFLDIETPILTKSTPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + G FYALPQ+PQ +KQ+LM SG DRY+QI  CFRDED RSDR P EF Q+D+E+SF
Sbjct: 180 SRNHYGKFYALPQSPQLFKQILMISGIDRYYQIVKCFRDEDLRSDRQP-EFTQIDIEVSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    I N +EN+++ ++ E  N N     F +I + +A+++YG+DKPDLRNPI + +V+
Sbjct: 239 MSAKKIRNLVENLIKKLWLEIRNIN--LKKFPQISFHEAMKKYGSDKPDLRNPIEIIDVS 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
             F   +F  F  +             +KG   +R   D   ++ +      L Y+  + 
Sbjct: 297 NIFKDKKFISFFNLNPQKNNRIALLCISKGAHLSRKKIDDYTKYVQRFDAKKLFYMKIKE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            + G +     +   L+ +  + I  +   ++GD  F IA             R  I  +
Sbjct: 357 CKLGCLGIHSSIKNILDEIILKEIIEKSQSKNGDILFLIADQEHIVNKSLGMLRLKIGID 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L I   N +E  WI++FP ++ +  +  +   H+PFT  +     +  N      +  YD
Sbjct: 417 LNITKKNRWEPLWIVNFPMFDKD-IQGNLSSVHHPFTAVKNMDREILKNSPDLAISDSYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ NG+EI  G +R H   +  Q F  +GI K +   +FG L  A + G PPH GIA G+
Sbjct: 476 LIINGYEIGGGSVRIHDVNMQKQVFDIIGIKKSMQNEKFGFLIEALKYGAPPHAGIALGL 535

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DRIVMLL  +KN+R+V  FP + +   L+  SPSTV    L+EL ++ ++ 
Sbjct: 536 DRIVMLLTNSKNIRDVIAFPKTTSATCLMTNSPSTVDNLLLQELAIKHLKK 586


>gi|291295943|ref|YP_003507341.1| aspartyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470902|gb|ADD28321.1| aspartyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 580

 Score =  555 bits (1431), Expect = e-156,   Method: Composition-based stats.
 Identities = 233/596 (39%), Positives = 341/596 (57%), Gaps = 25/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT  CG+L     G  V L GWV+R R  GG+IF+D+RD  G+ QVV NP++ACF  A  
Sbjct: 3   RTLYCGELREHHAGQTVVLEGWVNRRRNLGGLIFIDLRDREGLAQVVVNPEAACFSEADR 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GER 118
           VR+EWV+ ++G V  R A+ +NA + TG +E+ A++IE+L+ A+  P P+        + 
Sbjct: 63  VRAEWVIRVEGSVRLRPADQLNAKLATGAVEVIAERIEVLAEAKTPPFPIDAGWRGEDDP 122

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R + R +DLRR  LH N+  R +++ ++   + A  FI   TP LT S+PEGAR
Sbjct: 123 HVGEEVRLRNRVVDLRRRRLHHNLRLRHKVVAAIYRFLDAHGFISVETPYLTRSTPEGAR 182

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR+  G FYALPQ+PQ +KQ+LM +G+DRYFQIA CFRDED R+DR P +F QLD
Sbjct: 183 DFLVPSRLEPGHFYALPQSPQLFKQMLMVAGYDRYFQIARCFRDEDLRADRQP-DFTQLD 241

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSFV Q+DI+   E +   +  E          F R+ Y + + RYG+DKPDLR  + 
Sbjct: 242 MEMSFVTQEDIIALNEELAAFILRETLGQE-PPLPFPRLTYTEVMNRYGSDKPDLRFGLE 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +VTE F   EFR F+    V             G  +R   + +   A+++G  GLA+
Sbjct: 301 LQDVTEAFRGGEFRAFAGAEVVKALVV-------PGLLSRREIEALEATAKTKGAAGLAW 353

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
             +   E+G ++  G +A+++       +  +L + +G +   +AG   K        R 
Sbjct: 354 ARF---ENGALS--GGIARYIP----AHLPEQLGLTEGHTLLLVAGPWRKTVESLGAVRL 404

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++LG+I    F+F W++DFP  EW+EE  +  + H+PFT P      L   D   ++
Sbjct: 405 ELGRQLGLIEPG-FKFLWVVDFPLLEWDEEAGRWTYMHHPFTSPNLEDLHLLDTDPGRVR 463

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+ YD V NG EI  G IR H  ++  + F+ +GI  E  + +FG L  A   G PPHGG
Sbjct: 464 AYAYDFVLNGSEIGGGSIRIHRRDLQERMFALLGIGPEEAQQKFGFLLEALSYGAPPHGG 523

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA G+DR V  L G +++REV  FP ++   + L G+P+ V   QL  +GL +   
Sbjct: 524 IAWGLDRFVAHLAGEESIREVIAFPKNKEGKETLTGAPAPVDEAQLAAVGLAVRSE 579


>gi|46198667|ref|YP_004334.1| aspartyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55980680|ref|YP_143977.1| aspartyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|549026|sp|P36419|SYD_THETH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62287575|sp|Q72KH6|SYD_THET2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|66773800|sp|Q5SKD2|SYD_THET8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|420805|pir||S33743 aspartate-tRNA ligase (EC 6.1.1.12) - Thermus aquaticus
 gi|9257069|pdb|1EFW|A Chain A, Crystal Structure Of Aspartyl-Trna Synthetase From Thermus
           Thermophilus Complexed To Trnaasp From Escherichia Coli
 gi|9257070|pdb|1EFW|B Chain B, Crystal Structure Of Aspartyl-Trna Synthetase From Thermus
           Thermophilus Complexed To Trnaasp From Escherichia Coli
 gi|12084697|pdb|1G51|A Chain A, Aspartyl Trna Synthetase From Thermus Thermophilus At 2.4
           A Resolution
 gi|12084698|pdb|1G51|B Chain B, Aspartyl Trna Synthetase From Thermus Thermophilus At 2.4
           A Resolution
 gi|20151171|pdb|1L0W|A Chain A, Aspartyl-Trna Synthetase-1 From Space-Grown Crystals
 gi|20151172|pdb|1L0W|B Chain B, Aspartyl-Trna Synthetase-1 From Space-Grown Crystals
 gi|396501|emb|CAA50282.1| aspartyl-tRNA synthetase [Thermus thermophilus]
 gi|46196290|gb|AAS80707.1| aspartyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55772093|dbj|BAD70534.1| aspartyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 580

 Score =  555 bits (1431), Expect = e-156,   Method: Composition-based stats.
 Identities = 247/596 (41%), Positives = 337/596 (56%), Gaps = 24/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  + VG  V L GWV+R R  GG+IFLD+RD  G+ Q+VA+P S  +  A+ 
Sbjct: 3   RTHYAGSLRETHVGEEVVLEGWVNRRRDLGGLIFLDLRDREGLVQLVAHPASPAYATAER 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG------ER 118
           VR EWV+   GLV  R     N  + TG++E+    +E+L+ A+  P PV        E+
Sbjct: 63  VRPEWVVRAKGLVRLRPEP--NPRLATGRVEVELSALEVLAEAKTPPFPVDAGWRGEEEK 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  E +R KYR+LDLRR  + +N+  R R+I ++   +  E F++  TP LT S+PEGAR
Sbjct: 121 EASEELRLKYRYLDLRRRRMQENLRLRHRVIKAIWDFLDREGFVQVETPFLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP R   G FYALPQ+PQ +KQ+LM +G DRYFQIA CFRDED R+DR P +F QLD
Sbjct: 181 DFLVPYRHEPGLFYALPQSPQLFKQMLMVAGLDRYFQIARCFRDEDLRADRQP-DFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE +D+L   E ++  VF E      +   F R+ Y++A+ RYG+DKPDLR  + 
Sbjct: 240 LEMSFVEVEDVLELNERLMAHVFREALGVE-LPLPFPRLSYEEAMERYGSDKPDLRFGLE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +  V   F  S FRVF +  SV          A     +R     + E A+     GLA+
Sbjct: 299 LKEVGPLFRQSGFRVFQEAESVKAL-------ALPKALSRKEVAELEEVAKRHKAQGLAW 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
              R++E G     G VAK L     EA+    + + GD+  F+AG      +     R 
Sbjct: 352 A--RVEEGG---FSGGVAKFLEP-VREALLQATEARPGDTLLFVAGPRKVAATALGAVRL 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
             A  LG+     F F W++DFP  EW+EEE+   + H+PFT P      L   D   ++
Sbjct: 406 RAADLLGL-KREGFRFLWVVDFPLLEWDEEEEAWTYMHHPFTSPHPEDLPLLEKDPGRVR 464

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG E+  G IR H   +  + F  +GI +E    +FG    A + G PPHGG
Sbjct: 465 ALAYDLVLNGVEVGGGSIRIHDPRLQARVFRLLGIGEEEQREKFGFFLEALEYGAPPHGG 524

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA G+DR++ L+ G+ ++REV  FP ++   D L G+PS V  EQLRELGL +V  
Sbjct: 525 IAWGLDRLLALMTGSPSIREVIAFPKNKEGKDPLTGAPSPVPEEQLRELGLMVVRP 580


>gi|327540384|gb|EGF26970.1| Aspartyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 568

 Score =  555 bits (1430), Expect = e-156,   Method: Composition-based stats.
 Identities = 219/571 (38%), Positives = 318/571 (55%), Gaps = 10/571 (1%)

Query: 27  VHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK---SVRSEWVLCIDGLVMSRSAE 83
           +   R HGG +F+D+RD YG+TQVV  P  A   + K    V +E V+ I G+V  R   
Sbjct: 1   MDSKRDHGGAVFIDLRDRYGLTQVVIGPPEANEALIKQAGHVPNESVILIRGVVADRLEG 60

Query: 84  TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV 143
             NA + TG+IE+ ++  EILS +E  P          E +R KYRFLDLRR  + + ++
Sbjct: 61  KTNAKLETGEIEVRSEHFEILSASETPPFTPGQSDLPGEDLRLKYRFLDLRRKEMQQALI 120

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
           +R+ II  MR      +FI+  TPIL  S+PEGARD+LVPSRV+  +FYALPQ+PQ YKQ
Sbjct: 121 RRSEIIKCMRDYFAEHDFIDVETPILGRSTPEGARDYLVPSRVHPSNFYALPQSPQLYKQ 180

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           +LM +GFDRY Q+A CFRDED R+DR P EF QLD+EMSFV+ +DI+  ++ ++    ++
Sbjct: 181 ILMVAGFDRYVQVAKCFRDEDLRADRQP-EFTQLDLEMSFVDSEDIIGLIDGLVAKTAKQ 239

Query: 264 FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
               +  +    R+ Y++A+RR+G+D PDLR  + + +VT     ++FRVF         
Sbjct: 240 VLGKDI-TLPLPRMTYEEAMRRFGSDAPDLRFGLEIVDVTSVAAKTDFRVFRGTADAGNF 298

Query: 324 YEVWAIPAKGGGGNRAFCDRMNEWARS-QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
                +       +R   D +  + +   G  GLA+  +R+++ G +    P+AK+ +  
Sbjct: 299 VRGINVKDSALKFSRRQIDELTAFVQQDFGAKGLAW--FRVEDDGTLW--SPIAKNFDEE 354

Query: 383 NTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPF 442
           +   I+  +  + GD   F+A      C   +  R  +A EL +         W+ +FP 
Sbjct: 355 HLAEIKALMGGEPGDLLMFLADTWEVTCKGLSGLRKRLAVELKLYEDGELNCSWVTEFPM 414

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E +EE  +    H+PFT P      L        +A  YDLV NG E   G IR H S+
Sbjct: 415 FEKDEEAGRYVAMHHPFTAPLEEDLPLLKESPEKCRAQAYDLVINGSEAGGGTIRIHDSK 474

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           V  Q F  +G+ +E   +RFG L  A + G PPHGGIA G+DR VML  G +N+REV  F
Sbjct: 475 VQSQVFELLGMDEETARDRFGFLLDALRFGAPPHGGIALGVDRWVMLFAGLENIREVIAF 534

Query: 563 PMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           P +Q   D++ G+P  V  +QL EL LR V 
Sbjct: 535 PKTQKAADMMTGAPGEVDADQLNELHLRTVS 565


>gi|283455705|ref|YP_003360269.1| aspartyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|283102339|gb|ADB09445.1| aspS Aspartyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 586

 Score =  555 bits (1430), Expect = e-156,   Method: Composition-based stats.
 Identities = 217/601 (36%), Positives = 331/601 (55%), Gaps = 33/601 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
               VG  V L+GWV R R HGG+ F+D+RD+ G+ QVV        E+A+ +RSE+V+ 
Sbjct: 2   TEELVGQKVTLAGWVDRRRDHGGVAFIDLRDNTGLVQVVI----YDEEMARPLRSEFVIR 57

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFGEREYPESIR 125
           + G V  R     N ++ TG+IE+ A+ IE+L+ ++ LP             +   E +R
Sbjct: 58  VIGEVRLRPDGNENDHLATGKIEVVAETIEVLAKSDALPFQVSTALENESENKLPGEDVR 117

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            KYR+LDLRR ++  N+  R+++  + R  +    F E  TP +  S+PEGARDF+VP+R
Sbjct: 118 LKYRYLDLRRPSMQHNLKLRSQMSKAARHALEEMGFEEVETPTMIKSTPEGARDFVVPAR 177

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           +  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF QLDMEM+FV+
Sbjct: 178 LVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQLDMEMAFVD 236

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           Q+D++   E V+  +++  S G  +     RI + +A+ +YG+DKPDLR    +  +T++
Sbjct: 237 QEDVMAMAEKVIAAIWK--SAGYEIQLPIQRITWQEAMDKYGSDKPDLRFGNPLVELTDY 294

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
           F ++ FRVF         Y    +   G    R   D   +WA+ +G  GLAY+ +   E
Sbjct: 295 FKNTPFRVFQAP------YVGAVLFKGGAATPRRQFDAWQDWAKQRGAKGLAYVVFA--E 346

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
           +G +   GPVAK+L+      ++  +  +DGD+ FF AG            R  +A   G
Sbjct: 347 NGELK--GPVAKNLSEEERNGLKEAVGAEDGDAVFFAAGRRTSAQELLGAVRVELADRAG 404

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGMESLKGNDLLS 476
           ++  + F F W++DFP ++  ++           K    H+PFTMP          D   
Sbjct: 405 LLKPDDFAFTWVVDFPLFKTTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWIDTFDKDPEH 464

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  YD+VCNG E+  G +R H  ++  +    +GI+ E   ++FG L  AF+ G PPH
Sbjct: 465 AMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGITPEEAADKFGFLLEAFKYGAPPH 524

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIA G DR   +L GA ++R+V  FP +    D L G+P+ +S EQ  E G+    +  
Sbjct: 525 AGIALGWDRTAAILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAETGVDYDPDED 584

Query: 597 K 597
           +
Sbjct: 585 E 585


>gi|212551115|ref|YP_002309432.1| aspartyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|229470554|sp|B6YS49|SYD_AZOPC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|212549353|dbj|BAG84021.1| aspartyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 583

 Score =  555 bits (1429), Expect = e-155,   Method: Composition-based stats.
 Identities = 214/594 (36%), Positives = 334/594 (56%), Gaps = 20/594 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            YRT++CG+L + +    V L GWV + R   GI+F+D+RD YGITQ++ N   + A + 
Sbjct: 1   MYRTNTCGELRIVNENQEVILCGWVQKSRRMSGIVFVDLRDRYGITQLIFNKKVNLALYN 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  EWV+ I+G V+ R     N++I TG IE+   ++  L+ +E  P  +    + 
Sbjct: 61  KALELGREWVIQIEGKVVKR--FNKNSDIPTGDIEIIVSRLRTLNPSEVPPFTIEENTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLRR  +  N+  R +++ ++R  + +  F+E  TP+L  S+PEGARDF
Sbjct: 119 GDDLRMKYRYLDLRRTLIRSNLELRHQMVFAIRNYLNSHEFMEVETPVLINSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+N G FY+LPQ+PQ +KQLLM +GFDRYFQ+  CFRDED R+DR P EF Q+D E
Sbjct: 179 IVPSRMNMGEFYSLPQSPQLFKQLLMIAGFDRYFQVVKCFRDEDLRTDRQP-EFTQVDCE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ+DIL+  E + + +F+     +     F R+ Y DAIR YG+DKPD+R  + + 
Sbjct: 238 MSFVEQEDILSIFEGLTKHLFKTIKGLDISG--FSRLSYADAIRFYGSDKPDIRFGMQLV 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWAR--SQGQPGLA 357
            + +  +   F VF +   V       AI A+G     R   D + ++ +    G  GL 
Sbjct: 296 EIKDITIGRGFDVFDESEYVG------AICAEGCAFYTRKQLDELTDFVKHPQIGAAGLI 349

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+ +  D     +    V K  + V+ +    R+  + GD    + G+  +     +  R
Sbjct: 350 YVRYSFDG----SLKSSVDKFYSTVDLQKWIDRVGAKQGDLVLILYGEKRETQKQLSRLR 405

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +   LG+ +   F   W++DFP +E++    +    H+PFT P+     L   +   +
Sbjct: 406 LEMGSRLGLRDKKQFGCLWVIDFPLFEYDNVLNRFFAKHHPFTSPKQEDVCLLETNPEFV 465

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  +D+V NG EI  G IR H  E+  + F+ +G S+   +++FG    AF+ G PPHG
Sbjct: 466 RANAFDMVINGIEIGGGSIRIHNYELQKKIFALLGFSESYTQSQFGFFVDAFKYGAPPHG 525

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DR V    G  ++R+   FP + +  D ++G+PS +S E+L EL L +
Sbjct: 526 GIALGLDRFVATFAGLDSIRDCIAFPKNNSGRDTMVGAPSIISRERLSELNLIV 579


>gi|254496361|ref|ZP_05109245.1| aspartyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254354415|gb|EET13066.1| aspartyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 546

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 202/545 (37%), Positives = 312/545 (57%), Gaps = 4/545 (0%)

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            + A F  A+ +RSE+V+ + G+V SR    INA + TG++E+   K+EIL+ +   P  
Sbjct: 5   ENQAIFSDAEKLRSEFVVRVTGVVRSRPEGMINATMATGKVEVVGTKLEILNQSPTPPFL 64

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
               +   E +R+KYR++DLRR ++   +  R ++ + +R  +  ++F++  TP+LT ++
Sbjct: 65  PDDFQTVNEDLRYKYRYIDLRRPSMQSKLRLRHKLNSCIRNYLNQQDFVDIETPMLTKAT 124

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           PEGARD+LVPSRV+ G FYALPQ+PQ +KQLLM SGFD+Y+QI  CFRDED R+DR P E
Sbjct: 125 PEGARDYLVPSRVHPGEFYALPQSPQLFKQLLMMSGFDKYYQIVRCFRDEDLRADRQP-E 183

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F QLD+EM+F+++++ILN +E +L+ +F E  N         R+ Y +A+RR+G+DKPD+
Sbjct: 184 FTQLDIEMAFIDEENILNLIEGLLKKIFSELMNVTLPEKL-PRMAYAEAMRRFGSDKPDM 242

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
           RNP+ + +V +     +F+VFS   + +    V      G   +R   D    +    G 
Sbjct: 243 RNPLELIDVADLVKECDFKVFSTAANDDESRVVALKLPNGCDLSRKDLDDYGRFVSIYGA 302

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GLAYI      +G      P+ K L+    +AI  R++   GD  FF A          
Sbjct: 303 KGLAYIKVNDRATGMDGLQSPILKFLSEDAVQAILDRVEAATGDVIFFGADKTHIVNESI 362

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
              R  +  +  +++   +E  WI+D+P +E +++  ++   H+PFT P+         +
Sbjct: 363 GALRIKLGHDKKLLSEG-WELLWIVDWPMFEMDQQNNRLQAMHHPFTSPKQLSADALCAN 421

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                A  YD+V NG+EI  G IR H S++    F  +GI+++  + +FG L  A Q G 
Sbjct: 422 PTHTLAKAYDIVINGYEIGGGSIRIHQSDLQKAVFKLLGINEQEAQEKFGFLLDALQYGA 481

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA GIDR+ MLL  + ++R+V  FP +Q     L  +PS     QL ELG+R+  
Sbjct: 482 PPHGGIALGIDRLAMLLTDSTSLRDVIAFPKTQTASCPLTNAPSPTGSAQLNELGIRLAP 541

Query: 594 -NPKK 597
            NP K
Sbjct: 542 TNPTK 546


>gi|297243526|ref|ZP_06927458.1| aspartyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296888571|gb|EFH27311.1| aspartyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 585

 Score =  553 bits (1425), Expect = e-155,   Method: Composition-based stats.
 Identities = 216/601 (35%), Positives = 328/601 (54%), Gaps = 33/601 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
               VG  V ++GWV R R HGG+ F+D+RD+ G+ QVV        E A+ +RSE+V+ 
Sbjct: 2   TEELVGQKVTIAGWVDRRRDHGGVAFVDVRDNTGLVQVVI----YDEETARPLRSEFVVQ 57

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFGEREYPESIR 125
           + G V  R     N ++ TG+IE+ A+ + IL+ ++ LP             +   E +R
Sbjct: 58  VTGEVRLRPDGNENDHLATGKIEIVAETVTILAKSDALPFQVSTALENESENKLPSEDVR 117

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            KYR+LDLRR ++ +N+  R+ +  + R  +   NF E  TP    S+PEGARDF+VP+R
Sbjct: 118 LKYRYLDLRRPSMQRNLKLRSDMAKAARHALEDMNFTEVETPTFIKSTPEGARDFVVPAR 177

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           +  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF QLDMEMSF  
Sbjct: 178 LVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQLDMEMSFAS 236

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           Q+D++   E V+  +++E   G+ ++    RI + +A+ +YG+DKPDLR    +  +T++
Sbjct: 237 QEDVMAMAERVIAAIWKE--AGHEIALPLPRITWQEAMDKYGSDKPDLRFGNPLIELTDY 294

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
           F ++ FRVF         Y    +   G    R   D   +WA+ +G  GLAY+ +   E
Sbjct: 295 FKNTPFRVFQA------SYVGAVLFKGGAATPRRQFDAWQDWAKQRGAKGLAYVVF--GE 346

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G +   GPVAK+L+      ++  +  +DGD+ FF AG            R  +A   G
Sbjct: 347 DGELK--GPVAKNLSEEERAGLKEAVGAEDGDAVFFAAGSRESSQLLLGAVRVELASRAG 404

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGMESLKGNDLLS 476
           +++ + F F W++DFP ++  ++           K    H+PFTMP          D   
Sbjct: 405 LLHPDEFAFTWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSADWIDKFDKDPEH 464

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  YD+VCNG E+  G +R H  ++  +  + +GI K   + +FG L  AF+ G PPH
Sbjct: 465 AMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVLGIDKAEADEKFGFLLEAFKYGAPPH 524

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIA G DR   +L GA ++R+V  FP +    D L G+P+ +S EQ  E G+       
Sbjct: 525 AGIALGWDRTAAILAGASSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAETGVDYDPEEN 584

Query: 597 K 597
           +
Sbjct: 585 E 585


>gi|323341710|ref|ZP_08081943.1| aspartate--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464135|gb|EFY09328.1| aspartate--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 583

 Score =  553 bits (1425), Expect = e-155,   Method: Composition-based stats.
 Identities = 215/592 (36%), Positives = 328/592 (55%), Gaps = 14/592 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L +  VG  V L GWV + R  G I F+D+RD  G+ Q+V N D     I + 
Sbjct: 3   RTHHNGMLRIEHVGEHVELVGWVAKRRNFGSINFIDLRDRSGLVQLVVNHDEYP--IVQE 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +++E+V+ + G V  R  +  N  + TG IE+   +++I++ A + P+ +  E +  E  
Sbjct: 61  LKNEFVISVSGTVRERQDK--NPKMDTGDIEIEVTEVKIINKAAQTPMIIADETDALEET 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR  +   ++ R RI+  MR  +    FI+  TP+LT S+PEGAR++LVPS
Sbjct: 119 RLKYRYLDLRRPVMQNKLITRARIVTEMRRTLDEMGFIDVETPMLTKSTPEGAREYLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G FYAL Q+PQ +KQLLM  G +RY+Q+A CFRDED R+DR   +F Q+D+E SF+
Sbjct: 179 RVHEGEFYALAQSPQIFKQLLMIGGLERYYQVARCFRDEDLRADRQL-DFTQVDIEASFL 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +Q   ++ +E V+  V     +         +I ++DA+  YG+DKPD+R  + + +   
Sbjct: 238 DQQQFMSLVEEVVDNVMVNVLSLE--KPRIPQIRFEDALNVYGSDKPDMRFEMYLQDFNR 295

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
            F+ SEF+VFS  L      +   +  +     R   D+  +  +  G  GL  +  +++
Sbjct: 296 IFMLSEFKVFSDTLKEGGVLKGLVLKGQAESMTRKVMDKYTDLVKKNGLKGL--VVLKVE 353

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E G     G  AK ++      +    +++ GD  F  +G     C+     R  +A++ 
Sbjct: 354 EDG---FAGGAAKFIDEQERLQMIQEYELEVGDVVFIGSGMWENTCTAVGALRLQLAKDY 410

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            +I  N F +CW++DFP +E +E+   I   H+PFT P+   E+L   D L + A  YDL
Sbjct: 411 NLIPENTFAYCWVVDFPMFEMDED--VIIARHHPFTAPREEDEALLNTDPLKVIAQAYDL 468

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NGFEIA G +R +  E+  Q F  +G + E ++ RFG    AF+ G PPHGGIA G+D
Sbjct: 469 VLNGFEIAGGSMRIYRQELQQQMFEIIGFTPEQIKKRFGFFVDAFKYGTPPHGGIAFGLD 528

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           R  M L  +  +R+V  FP + +    L  +PS    +QL EL L IV   K
Sbjct: 529 RFAMALTHSDTIRDVIAFPKNASARCPLTNAPSPAVDKQLEELHLEIVHKKK 580


>gi|111220663|ref|YP_711457.1| aspartate tRNA synthetase [Frankia alni ACN14a]
 gi|111148195|emb|CAJ59864.1| aspartate tRNA synthetase [Frankia alni ACN14a]
          Length = 618

 Score =  552 bits (1423), Expect = e-155,   Method: Composition-based stats.
 Identities = 225/593 (37%), Positives = 321/593 (54%), Gaps = 27/593 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH C DL    VG  V + GWV   R HG  + F+D+RDH G+ QVV +          
Sbjct: 29  RTHLCADLRADHVGRTVSVCGWVAHRRQHGQSLTFVDLRDHSGLLQVVVDGSV------- 81

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122
            VRSE+VL + G V  R   T N  + TG++EL    +EILSVA   P P+    +   E
Sbjct: 82  DVRSEYVLRVTGTVAIRPEGTANPALATGEVELRDCAVEILSVATPPPFPLDDRADAVDE 141

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S R  YR+LDLRR+ + +N+  R+ ++ +MR  +   +F+E  TP+L  S+PEGAR+F+V
Sbjct: 142 STRLAYRYLDLRRERMQRNLRTRSAVLGAMRAALAPLDFVEVETPLLMPSTPEGAREFIV 201

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   GSFYALPQ+PQ +KQLLM  G DRYFQ A C RDED R+DR   EF QLD+EMS
Sbjct: 202 PSRQFPGSFYALPQSPQLFKQLLMVGGTDRYFQFARCLRDEDLRADRQ-YEFTQLDLEMS 260

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+QDD+L+ +      +    +          RI + +++ R+G DKPDLR  + +  +
Sbjct: 261 FVDQDDVLDVISA--AVLAAARAVRTDTVPPIERITWHESMNRFGVDKPDLRFGMELVEL 318

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T  F  S F+ F+   ++        +P      NR   D +   A++ G  GL ++  R
Sbjct: 319 TAIFAGSGFKAFAGAEAIKG----IRVPGGSAAHNRRRLDDLTTRAKALGAKGLVWM--R 372

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           +   G +    PVAK L+      I    D  +GD    +A      C      RN    
Sbjct: 373 VGAGGELE--SPVAKFLSADELAGIVAATDAVEGDLLLLVADAWATTCEVLGQLRN---- 426

Query: 423 ELGIINCNC--FEFCWIMDFPFYE-WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +LG          F W++DFP +   +    +    H+PFT P     +   ++ L++++
Sbjct: 427 DLGRPPAGQGPLRFVWVVDFPLFVGVDPATGRPKPGHHPFTRPHPDDIAKLESEPLAVRS 486

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG+E+ SG IR H S +  + F  +GI+ +    RFG     F  G PPHGG 
Sbjct: 487 RAYDLVLNGWELGSGSIRIHESALQQRIFGLLGITPDEANARFGFFLTPFGYGAPPHGGF 546

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           A GIDR+V +L G +N+REV  FP +Q+  D L G+P+ V+  QLRELG+R++
Sbjct: 547 AVGIDRLVAILAGEENIREVIAFPKTQSGLDPLTGAPTQVTDRQLRELGVRVI 599


>gi|298252816|ref|ZP_06976610.1| aspartyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297533180|gb|EFH72064.1| aspartyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 585

 Score =  552 bits (1423), Expect = e-155,   Method: Composition-based stats.
 Identities = 216/601 (35%), Positives = 328/601 (54%), Gaps = 33/601 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
               VG  V ++GWV R R HGG+ F+D+RD+ G+ QVV        E A+ +RSE+V+ 
Sbjct: 2   TEELVGQKVTIAGWVDRRRDHGGVAFVDVRDNTGLVQVVI----YDEETARPLRSEFVVQ 57

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-------VFGEREYPESIR 125
           + G V  R     N ++ TG+IE+ A+ + IL+ ++ LP             +   E +R
Sbjct: 58  VTGEVRLRPDGNENDHLATGKIEIVAETVTILAKSDALPFQVSTALENESENKLPSEDVR 117

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            KYR+LDLRR ++ +N+  R+ +  + R  +   NF E  TP    S+PEGARDF+VP+R
Sbjct: 118 LKYRYLDLRRPSMQRNLKLRSDMAKAARHALEDMNFTEVETPTFIKSTPEGARDFVVPAR 177

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           +  GS+YALPQ+PQ  KQLLM SG +RY+Q+A C+RDED R+DR P EF QLDMEMSF  
Sbjct: 178 LVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQP-EFTQLDMEMSFAS 236

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           Q+D++   E V+  +++E   G+ ++    RI + +A+ +YG+DKPDLR    +  +T++
Sbjct: 237 QEDVMAMAERVIAAIWKE--AGHEITLPLPRITWQEAMDKYGSDKPDLRFGNPLIELTDY 294

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
           F ++ FRVF         Y    +   G    R   D   +WA+ +G  GLAY+ +   E
Sbjct: 295 FKNTPFRVFQA------SYVGAVLFKGGAATPRRQFDAWQDWAKQRGAKGLAYVVF--GE 346

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G +   GPVAK+L+      ++  +  +DGD+ FF AG            R  +A   G
Sbjct: 347 DGELK--GPVAKNLSEEERAGLKEAVGAEDGDAVFFAAGSRESSQLLLGAVRVELASRAG 404

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEK---------KIDFAHNPFTMPQGGMESLKGNDLLS 476
           +++ + F F W++DFP ++  ++           K    H+PFTMP          D   
Sbjct: 405 LLHPDEFAFTWVVDFPLFKRTDDPDDDDVAVGHSKWTSMHHPFTMPSADWIDKFDKDPEH 464

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  YD+VCNG E+  G +R H  ++  +  + +GI K   + +FG L  AF+ G PPH
Sbjct: 465 AMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVLGIDKAEADEKFGFLLEAFKYGAPPH 524

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            GIA G DR   +L GA ++R+V  FP +    D L G+P+ +S EQ  E G+       
Sbjct: 525 AGIALGWDRTAAILAGASSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAETGVDYDPEED 584

Query: 597 K 597
           +
Sbjct: 585 E 585


>gi|255994166|ref|ZP_05427301.1| aspartate--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993834|gb|EEU03923.1| aspartate--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 583

 Score =  551 bits (1421), Expect = e-154,   Method: Composition-based stats.
 Identities = 219/593 (36%), Positives = 326/593 (54%), Gaps = 17/593 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            R    G++  + +   V L+GWV ++R  G I+FLD+RD  GI QV  +   D   F+ 
Sbjct: 5   KRNAFAGEISDAHLDKEVSLNGWVSKIRKLGEIVFLDLRDRTGIVQVFFDKNIDENLFKK 64

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
              ++SE+V+ I G V  R  E  N ++ TG+ E+    + I S +E  P+ V  + +  
Sbjct: 65  VNELKSEYVIGISGKVRIR--ENENPDMKTGKYEVVGSDLVIYSASETPPIYVKDDDDVS 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLR+ ++ K +  R  +    R       F E  TP+L   +PEGARD+L
Sbjct: 123 EDLRLKYRYLDLRKTSMQKILDIRHELTKLTRKYFDELGFREIETPMLIKPTPEGARDYL 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRV++GSFYALPQ+PQ YKQLLM SG DRY QIA CFRDED R+DR P EF Q+DME+
Sbjct: 183 VPSRVHKGSFYALPQSPQMYKQLLMVSGCDRYIQIAKCFRDEDLRADRQP-EFTQIDMEL 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF + D+I+   E  L+ VF++       +  F R  YD+A+ R+G+DKPD R  + +H+
Sbjct: 242 SFTDADEIIAIEEGFLKEVFKKIKGKEI-TTPFRRFSYDEAMERFGSDKPDTRFGMELHD 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++   ++  F VF K +S         +       +R   D++ E A+  G  GLA+I +
Sbjct: 301 ISSLVINKGFNVFDKAVSEGGSVRGICVKGGSEKYSRKGIDKLTELAKDYGILGLAWIRY 360

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                        + K  +  + E I    + + GD     +G            RNHIA
Sbjct: 361 ------TEPIKSSIGKFYSDSDLEEIARAFNAEKGDLILLASGINKVVFDSLGFLRNHIA 414

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAF 480
           +E  +I+ +  +  W+ DFP +   ++  K    H+PFT P+   +E LK  D   +KA 
Sbjct: 415 KEQDLIDKDQIDLLWVTDFPMFSLEDDGHK--AMHHPFTSPKLNSLEDLK--DPKKLKAD 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG EI  G IR H  +V  + F  +G+ +E +E +FG L  AF  G+PPHGG+A
Sbjct: 471 AYDIVLNGNEIGGGSIRIHDKDVQKEIFKILGMDEEEIEAKFGFLLNAFSYGVPPHGGLA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR+ M+L GA ++++V  FP +Q     L  +P     EQL ELG++I +
Sbjct: 531 YGLDRLCMILAGASSIKDVIAFPKNQAAECPLSKAPDAADKEQLTELGIQIKK 583


>gi|218131086|ref|ZP_03459890.1| hypothetical protein BACEGG_02691 [Bacteroides eggerthii DSM 20697]
 gi|217986790|gb|EEC53123.1| hypothetical protein BACEGG_02691 [Bacteroides eggerthii DSM 20697]
          Length = 555

 Score =  551 bits (1420), Expect = e-154,   Method: Composition-based stats.
 Identities = 209/568 (36%), Positives = 315/568 (55%), Gaps = 18/568 (3%)

Query: 33  HGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSEWVLCIDGLVMSRSAETINANII 90
            GG+ F+D+RD YGITQ+V N +      E A  +  E+V+ I G V  R ++  N NI 
Sbjct: 1   MGGMTFIDLRDRYGITQLVFNEEVDAELCEQANHLGREFVIQIVGTVNERFSK--NKNIP 58

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIIN 150
           TG IE+   ++ +L+ A   P  +    +  + IR KYR+LDLRR T+ KN+  R ++  
Sbjct: 59  TGDIEIIVSELNVLNSALTPPFTIEDNTDGGDDIRMKYRYLDLRRATVRKNLELRHKMTI 118

Query: 151 SMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF 210
            +R  + ++ FIE  TP+L  S+PEGARDF+VPSR+N G FYALPQ+PQ  KQLLM SGF
Sbjct: 119 EVRKYLDSKGFIEVETPLLIGSTPEGARDFVVPSRMNPGQFYALPQSPQTLKQLLMVSGF 178

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
           DRYFQIA CFRDED R+DR P EF Q+D EMSFV+QDD++   E + + +F+E      +
Sbjct: 179 DRYFQIAKCFRDEDLRADRQP-EFTQIDCEMSFVQQDDVIELFEGMAKYLFKEIRGVE-L 236

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           +  F R+ + +A++ YG+DKPDLR  +    + +      F VF     +          
Sbjct: 237 TEPFQRMPWANAMKYYGSDKPDLRFGMKFVELMDIMKGHGFSVFDNAAYIGG-----ICA 291

Query: 331 AKGGGGNRAFCDRMNEWARS--QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIR 388
                  R   D + E+ +    G  G+ Y   R++  G V     V K       + ++
Sbjct: 292 EGAASYTRKQLDALTEFVKKPQIGAKGMVYA--RVEADGTVK--SSVDKFYTQEVLQEMK 347

Query: 389 VRLDMQDGDSCFFIAGDPL-KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNE 447
                + GD    ++GD   K      + R  +  +LG+ + N F   WI+DFP +EW+E
Sbjct: 348 AAFGAKPGDLILILSGDDAMKTRKQLNELRLEMGNQLGLRDKNKFALLWIVDFPMFEWSE 407

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
           EE ++   H+PFT P+     L   +  +++A  YD+VCNG E+  G IR H +++  + 
Sbjct: 408 EEGRLMAMHHPFTHPKDEDIPLLDTNPAAVRADAYDMVCNGIEVGGGSIRIHDAQLQAKM 467

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           F  +G + E  E +FG L  AF+ G PPHGG+A G+DR V +  G  ++R+   FP + +
Sbjct: 468 FEILGFTPEKAEEQFGFLMNAFKFGAPPHGGLAYGLDRWVSIFAGLDSIRDCIAFPKNNS 527

Query: 568 FCDLLMGSPSTVSVEQLRELGLRIVENP 595
             D+++ +PS +  +QL EL L +    
Sbjct: 528 GRDVMLDAPSAIDQKQLDELNLIVEVKE 555


>gi|288921169|ref|ZP_06415456.1| aspartyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288347426|gb|EFC81716.1| aspartyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 603

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 226/595 (37%), Positives = 324/595 (54%), Gaps = 22/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH CGDL + + G  V + GWV   R HG  ++F+D+RDH G+ Q V +          
Sbjct: 16  RTHLCGDLRLDNAGQRVTVCGWVAHRRQHGQSLMFVDLRDHSGLLQCVVDGSV------- 68

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             RSE+VL I G V  R   T N  + TG +EL+   +E+LS A   P P+    +  E 
Sbjct: 69  DARSEYVLRITGTVSVRPEGTANPALATGDVELTDCSVEVLSTATPPPFPLDDRADSVEE 128

Query: 124 -IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R  YR+LDLRR+ + +N+  R+ ++ ++R       F+E  TP+L  S+PEGAR+F+V
Sbjct: 129 GTRLAYRYLDLRRERMQRNLRTRSAVLGALRSAFADSGFVEVETPLLMPSTPEGAREFVV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   GSFYALPQ+PQ +KQLLM  G DRYFQ+A C RDED R+DR   EF QLD+EMS
Sbjct: 189 PSRQFPGSFYALPQSPQLFKQLLMVGGMDRYFQLARCLRDEDLRADRQ-YEFTQLDLEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           FV+ DD+L  + + +         G+  +     R+ + DA+ R+G DKPDLR  + +  
Sbjct: 248 FVDVDDVLGVVSSAVLAAAGAAVEGSGRAMPPIERLTWHDAMNRFGVDKPDLRFGMELVE 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T  F +S F+ F+      P  +   +P      NR   D + + A+  G  GL ++  
Sbjct: 308 LTAIFGNSGFKAFAGA----PAVKGIRVPGGSATHNRKALDTLTDRAKKLGAKGLVWM-- 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R+  +G +    PVAK L+     AI      Q+GD    +A +    C      RN + 
Sbjct: 362 RVAAAGALE--SPVAKFLSAEELAAIVAATQAQEGDLLLLVADEWETACEVLGQLRNDLG 419

Query: 422 QELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           +           F W++DFP +   +    +    H+PFT P         +D L++++ 
Sbjct: 420 RPP--AGEGELRFVWVVDFPLFVGVDATTGRPKPGHHPFTRPHPSDVEKMESDPLAVRSL 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+ SG IR H SE+  + F  +GIS +  + RFG     F  G PPHGG A
Sbjct: 478 AYDLVLNGWELGSGSIRIHESELQQRIFGLLGISPDEAQQRFGFFLTPFGYGAPPHGGFA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            GIDR+V +L G  N+REV  FP +Q+  D + G+P+TV   QLRELG+R+V  P
Sbjct: 538 FGIDRLVAILAGEDNIREVIAFPKTQSGLDPMTGAPTTVDERQLRELGIRVVAPP 592


>gi|289641491|ref|ZP_06473654.1| aspartyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289508701|gb|EFD29637.1| aspartyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 579

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 221/592 (37%), Positives = 323/592 (54%), Gaps = 23/592 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63
           R+H CG L    +G+ V + GWV R R HG  ++F+D+RDH G  Q V +          
Sbjct: 6   RSHLCGALRTEHIGATVTVCGWVARRRQHGQSLMFVDLRDHSGQVQCVVDGSV------- 58

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122
            VRSE+V+ +   V +R   TIN N+ TG+IEL    + +LS A   P P+    +   E
Sbjct: 59  DVRSEYVVAVTATVAARPVGTINPNLATGEIELHDCTVMVLSAALPPPFPIDERADSVDE 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + R  YR+LDLRR+ + +N+  R+ ++ ++R  ++   F+E  TP+L  S+PEGAR+F+V
Sbjct: 119 ATRLTYRYLDLRRERMQRNLRTRSAVLAALRSELVPREFVEVETPLLMPSTPEGAREFVV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   GSFYALPQ+PQ +KQLLM  G DRYFQ A C RDED R+DR   EF QLD+EMS
Sbjct: 179 PSRQFPGSFYALPQSPQLFKQLLMVGGTDRYFQFARCLRDEDLRADRQ-YEFTQLDIEMS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+QDD+L  +   +       + G  V     RI + +A+ R+G DKPDLR  + +  +
Sbjct: 238 FVDQDDVLEVISAAVLAAARAVTGGTVVP--IERITWHEAMDRFGVDKPDLRFGLELVEL 295

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T  F  S F+ F+      P  +   +P      NR   D + E A+  G  GL ++  R
Sbjct: 296 TGVFTGSGFQAFAGA----PSVKGIRVPGGSATHNRKALDALTERAKQLGAKGLVWM--R 349

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           +   G++    PVAK L+      I      +DGD    +A +    C      RN + +
Sbjct: 350 VGAGGSLE--SPVAKFLSAAELAGIVKATGGEDGDLLLLVADEWATVCEVLGQLRNDLGR 407

Query: 423 ELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
                    F F W+ DFP +   + +  +    H+PFT P          + L++++  
Sbjct: 408 PP--AGEGGFRFAWVTDFPLFVGVDSQTGRPKPGHHPFTRPHPDDLDKLETEPLAVRSRA 465

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+E+ SG IR H  ++  + F+ +GIS E  + RFG     F  G PPHGG A 
Sbjct: 466 YDLVLNGWELGSGSIRIHEPDLQQRIFATLGISAEEADRRFGFFLTPFSYGAPPHGGFAV 525

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDR+V +L G  N+REV  FP +Q+  D + G+P+ +   Q+RELG+R++ 
Sbjct: 526 GIDRLVAILAGEDNIREVIAFPKTQSGLDPMTGAPTPIDARQVRELGIRVLP 577


>gi|158317668|ref|YP_001510176.1| aspartyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158113073|gb|ABW15270.1| aspartyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 619

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 227/590 (38%), Positives = 325/590 (55%), Gaps = 22/590 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH CGDLG+ + G  V + GWV   R HG  ++F+D+RDH G+ Q V +          
Sbjct: 16  RTHLCGDLGLGNAGQRVTVCGWVAHRRQHGQSLMFVDLRDHSGLLQCVVDGSV------- 68

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPE 122
             RSE+VL I G V +R   T+N  + TG++EL+   +E+LSVA   P P+    +   E
Sbjct: 69  DARSEYVLRITGTVTARPEGTVNPALATGEVELTDCAVEVLSVAAPPPFPLDDRADSVEE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S R  YR+LDLRRD + +N+  R+ ++ ++R       F+E  TP+L  S+PEGAR+F+V
Sbjct: 129 STRLTYRYLDLRRDRMQRNLRTRSAVLGALRTAFADRGFVEVETPLLMPSTPEGAREFVV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   GSFYALPQ+PQ +KQLLM  G DRYFQ+A C RDED R+DR   EF QLD+EMS
Sbjct: 189 PSRQFPGSFYALPQSPQLFKQLLMVGGMDRYFQLARCLRDEDLRADRQ-YEFTQLDLEMS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           FV  DDIL+ +   +       + G+  +     R+ + DA+ R+G DKPDLR  + +  
Sbjct: 248 FVGVDDILDVVSAAVLSAAAAAAAGSGRAVPEIERLTWHDAMNRFGVDKPDLRFGMELVE 307

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +T  F  S F+ F+      P  +   +P      NR   D + + A+  G  GL ++  
Sbjct: 308 LTAIFADSGFKAFAGA----PAVKGIRVPGGSATHNRKALDTLTDRAKKLGAKGLVWM-- 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R+  +G +    PVAK L+      I      ++GD    +A +    C      RN + 
Sbjct: 362 RVAAAGGLE--SPVAKFLSPAELTGIVTATAAEEGDLLLLVADEWETTCEVLGQLRNDLG 419

Query: 422 QELGIINCNCFEFCWIMDFPFYE-WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           +           F W++DFP +   +    +    H+PFT P         ++ L++++ 
Sbjct: 420 RPP--AGAGELRFAWVVDFPLFVGVDAATGRPKPGHHPFTRPHPDDVEKMESEPLAVRSL 477

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+ SG IR H SE+  + F  +GIS E  + RFG     F  G PPHGG A
Sbjct: 478 AYDLVLNGWELGSGSIRIHESELQQRVFGLLGISPEEAKARFGFFLTPFGYGAPPHGGFA 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            GIDR+V +L G  N+REV  FP +Q+  D L G+P+T+   QLRELG+R
Sbjct: 538 FGIDRLVAVLAGEDNIREVIAFPKTQSGLDPLTGAPTTIDERQLRELGIR 587


>gi|328949312|ref|YP_004366649.1| aspartyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328449636|gb|AEB15352.1| aspartyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 610

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 232/615 (37%), Positives = 348/615 (56%), Gaps = 27/615 (4%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACF 59
           +  RT +CG+L  +DVG  V L+GWV R R  GG+IF+ +RD YGITQV+   N      
Sbjct: 3   NSKRTVTCGELTKADVGKKVVLNGWVSRTRDLGGLIFIRLRDRYGITQVMVGDNASDEVK 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +IA S++SE+ + ++G+V +R+ + +N ++ TG+IE+ A  IEI + ++ELP  +   R+
Sbjct: 63  KIAASLKSEYCIAVEGVVAARAEKDVNKDMATGEIEVEACDIEIFTTSQELPFSIEEVRQ 122

Query: 120 YP-------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                    E +R KYR+LDLRR+ +  NI+ R+ +  + R  + ++ F+E  TP    S
Sbjct: 123 KDGTLVVANEDLRLKYRYLDLRREPMQHNIILRSAVTFATREFLTSKGFLEIETPTFIKS 182

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           +PEGARD+LVPSRV+ G FY+LPQ+PQ YKQLLM SGFD+YFQIA C+RDED R DR P 
Sbjct: 183 TPEGARDYLVPSRVHPGKFYSLPQSPQLYKQLLMVSGFDKYFQIARCYRDEDARGDRQP- 241

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF Q+DMEMSF  ++++L+T E ++R +F++  N   +  +F RI +DDA   YG+DKPD
Sbjct: 242 EFTQIDMEMSFTNREEVLDTTEELMRHIFKKTLNYE-LPVHFDRISWDDAFDLYGSDKPD 300

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY---------EVWAIPAKGGGGNRAFCDR 343
           LR  + M +       S+F  F    +              +   +       +R   + 
Sbjct: 301 LRFDMKMQDAAFMADLSDFNAFKAGAANADKNIERHKRSGLKALVVKNAADKYSRKHIEA 360

Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403
           +   A+     GLA++  ++D  G     G ++K       E I  RL  +  D   F++
Sbjct: 361 LEAVAKINHAKGLAWM--KVDAEGKFE--GGISKFFAGKEAE-ICSRLGAEKNDLLLFVS 415

Query: 404 G-DPLKFCSFAADARNHIAQELGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
                  C      R  + ++L + N  + F F WI+DFP++ WNEEE   +  H+ FT+
Sbjct: 416 DEKWQTACVALGAVRKQLGKDLNLYNPKDEFHFAWIIDFPYFAWNEEENHWETEHHMFTL 475

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           PQ        +D  S+K   YDLV NG+E+ASG +R +   +  + F  VG S+E  E  
Sbjct: 476 PQKKYWDTLESDPGSVKGDLYDLVLNGYELASGSMRINDPALQERIFEIVGYSRERAEKA 535

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
           FG L +AF+ G PPHGGIA G+DR++ML+   +++ EV  FP +      +   PS V  
Sbjct: 536 FGFLVQAFKFGAPPHGGIAPGLDRLIMLMCHEESIHEVIAFPKNNLAMSPMDECPSAVDQ 595

Query: 582 EQLRELGLRIVENPK 596
            QL +L L+  E  K
Sbjct: 596 SQLDDLHLKCTEVEK 610


>gi|225027158|ref|ZP_03716350.1| hypothetical protein EUBHAL_01414 [Eubacterium hallii DSM 3353]
 gi|224955622|gb|EEG36831.1| hypothetical protein EUBHAL_01414 [Eubacterium hallii DSM 3353]
          Length = 583

 Score =  546 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 256/593 (43%), Positives = 370/593 (62%), Gaps = 19/593 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR  +   L   +VG  VR++GWV  +R HGG+ F+D+RD YG+ QVV    +    I K
Sbjct: 7   YRDRTLDMLSEENVGETVRVAGWVENIRDHGGVSFIDLRDMYGVLQVVMRDTTLLEGINK 66

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
                  + ++G++  R  ET N  I TG IEL A K+++L    ++LP  V   +E  E
Sbjct: 67  E----DCISLEGVIEHRDEETYNPKIPTGTIELEAHKVDMLGKVYKQLPFEVMTSKENHE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           ++R KYR+LDLR   +  N++ R+++I+ +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 123 NVRLKYRYLDLRNKKVKDNMIFRSKVISFLRQKMTDMGFLEIQTPILCASSPEGARDYIV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 183 PSRKYKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   FE+F+       +  +  I Y  A+  +G+DKPDLRNP+ + 
Sbjct: 243 FATQEDVFRVGEEVLTATFEKFAPEGSVVTAAPYPVISYKQAMLEFGSDKPDLRNPLRIV 302

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT+ F    F+ F          +           ++ F +++ ++A S G  GL Y+ 
Sbjct: 303 DVTDFFQRCTFKPF--------HGQTVRAIKVSNKMSKGFHEKLLKFATSIGMGGLGYLE 354

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D    ++  GP+ K +       IR    ++ GD+ FFIA    +   +A   RN +
Sbjct: 355 VKED----LSYKGPIDKFIPDDMKAEIREIASLKAGDTIFFIADKEKQAALYAGQLRNEL 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            Q L ++  N + FC+I DFP YE++EE+KKI F HNPF+MPQGG+E+L   D L + A+
Sbjct: 411 GQRLDLLEKNAYRFCFINDFPMYEYDEEQKKIIFTHNPFSMPQGGLEALTTKDPLELLAY 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G ++E ++ +FG LY AFQ G PPH G+A
Sbjct: 471 QYDIVCNGVELSSGAVRNHNLDIMVKAFEIAGYTEEDLKEKFGALYNAFQYGAPPHAGMA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR++MLL   +N+REV  FPM+ N  D++ G+P+ VS  QLRE+ +++ +
Sbjct: 531 PGVDRMIMLLRNEENIREVIPFPMNGNAQDVMCGAPNEVSEMQLREVHIKVRK 583


>gi|218132544|ref|ZP_03461348.1| hypothetical protein BACPEC_00403 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992654|gb|EEC58656.1| hypothetical protein BACPEC_00403 [Bacteroides pectinophilus ATCC
           43243]
          Length = 591

 Score =  546 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 255/593 (43%), Positives = 364/593 (61%), Gaps = 19/593 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR+ +   +  +D+G  ++L+GWV  +R HGG+ F+D+RD YG+ QVV        ++ K
Sbjct: 15  YRSKTMNQVSENDIGKEMKLAGWVENIRDHGGVSFVDLRDMYGVVQVVFRDT----QLLK 70

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
            +R E  + + G++M R  ET N  I TG +EL A ++ IL     +LP  V   +E  E
Sbjct: 71  GIRKEQCISVAGVIMQRDEETYNPKIATGTVELEAHEVNILGKVYRDLPFEVPTSKEIRE 130

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  NI+ R+ +I  +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 131 DVRLKYRYLDLRNQKVKDNILFRSNVITYLRQKMNDMGFVEIQTPILCASSPEGARDYIV 190

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV++G FYALPQAPQQ+KQLLMASGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 191 PSRVHKGKFYALPQAPQQFKQLLMASGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 250

Query: 243 FVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   FE+F+          F  I Y  A+  +G+DKPDLRNP+ + 
Sbjct: 251 FATQEDVFAVGEEVLTSTFEKFAPEGYEVTKAPFPIISYKQAMLEFGSDKPDLRNPLRII 310

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VTE F    F+ F          +           ++ F +++ ++A+S G  GL Y+ 
Sbjct: 311 DVTEFFQRCTFKPF--------HGKTVRALKVHANLSKGFHEKLLKFAQSIGMKGLGYLE 362

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D    ++  GP+ K +       +  +  +  GD  FFIA        +A   RN +
Sbjct: 363 VNED----MSYKGPIDKFIPDDMKAELAQQAGLVSGDVIFFIADTEEAASKYAGQIRNEL 418

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
              L +I  N + FC++ DFP YE +EE K+I F HNPF+MPQGG+E+L   + L I A+
Sbjct: 419 GARLDLIEKNAYRFCYVNDFPMYELDEETKQIGFTHNPFSMPQGGLEALNTKNPLDILAY 478

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G  +E ++ +FG LY AFQ G PPH G+A
Sbjct: 479 QYDIVCNGIELSSGAVRNHDIDIMVKAFEIAGYDEETLKAKFGALYNAFQFGAPPHAGMA 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR++MLL   +N+REV  FPM+    DL+ G+P+ VS +QLRE  +++ +
Sbjct: 539 PGVDRMIMLLRNEENIREVIAFPMNSTAQDLMTGAPNEVSEKQLREAHIKVRD 591


>gi|307107264|gb|EFN55507.1| hypothetical protein CHLNCDRAFT_35428 [Chlorella variabilis]
          Length = 710

 Score =  546 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 219/617 (35%), Positives = 338/617 (54%), Gaps = 32/617 (5%)

Query: 5   RTHSCGDLGVSDVG-SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EI 61
           R+H CG L  +D+G S V + GWV R R  GG++FLD+RDH GI QVV +P         
Sbjct: 85  RSHGCGSLTAADLGGSPVTVCGWVDRYRNLGGLLFLDVRDHTGIIQVVVDPQQQPEVAAK 144

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL----PVFGE 117
           A+ +R+E+V+ + G + +R     N  + TG +E+S   +++L+               +
Sbjct: 145 AERLRAEYVVAVTGQLRARQDP--NPRMKTGDLEISPTDVKVLNAVTRKLPFLVSQAEDQ 202

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPE 175
            E P E +R K+R LDLRR  +  N+  R  I+  +R  +     F+E  TPILT S+PE
Sbjct: 203 AETPREELRLKHRVLDLRRPRMADNLRLRHAIVRCIRRFLEDGHGFLEVETPILTRSTPE 262

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA-------PCFRDEDPRSD 228
           GARD+LVPSR+  G +YALPQ+PQ +KQ+LM +GFDRY+Q +        CFRDED R+D
Sbjct: 263 GARDYLVPSRLQAGDWYALPQSPQLFKQMLMVAGFDRYYQASHGAGGSSRCFRDEDLRAD 322

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           R P EF QLD+EM+++++D I+  ME+++  VF++ +  + V+  F R+ Y +A+ +Y +
Sbjct: 323 RQP-EFTQLDLEMAWMDRDAIMGLMESMVATVFQQVAGVD-VAAPFQRLSYAEAMAKYAS 380

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA--KGGGGNRAFCDRMNE 346
           DKPDLR  + M  VTE      FRVF+  ++     +   +P   +           ++ 
Sbjct: 381 DKPDLRFGLEMAEVTEAVRECGFRVFAGAVAAGGIVKGIRVPDGRQVSNARVKPKGDVSN 440

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM----QDGDSCFFI 402
            A + G  GL Y+  R+ E G +    PV + L+     A+  ++      + GD     
Sbjct: 441 EAVAGGAAGLVYV--RVAEGGAIEAAKPVMEGLSEEQRAALVQQMQASGAGEPGDLLLLA 498

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           AG            R ++ + L +I        W++DFP +E NEEE +++  H+PFT P
Sbjct: 499 AGPAGAVNKALDRVRLYLGRSLDLIKEGQHSLLWVVDFPMFERNEEEGRLEALHHPFTAP 558

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
                 L   DL   +A  YD+V NG EI  G +R +  ++  Q F+ +G+S+E   ++F
Sbjct: 559 HPDD--LARGDLAGARALAYDMVYNGVEIGGGSLRIYRRDIQQQVFATIGLSEEEARSKF 616

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           G L   F+ G PPHGGIA G+DR+ MLL G  ++R+V  FP +      L G+P+ V+ +
Sbjct: 617 GYLLDCFEIGAPPHGGIAFGLDRLAMLLAGVPSIRDVIAFPKTSQAQCALTGAPAGVAAD 676

Query: 583 QLRELGLRIVENPKKIL 599
           QL+ L   + + P K  
Sbjct: 677 QLQALH--VAQLPAKAA 691


>gi|283769648|ref|ZP_06342544.1| aspartate--tRNA ligase [Bulleidia extructa W1219]
 gi|283103916|gb|EFC05302.1| aspartate--tRNA ligase [Bulleidia extructa W1219]
          Length = 582

 Score =  546 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 213/591 (36%), Positives = 331/591 (56%), Gaps = 13/591 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R    G L   D+G  V+L GWV+  R  G +IF+D+RD  G+ Q+V   +       K 
Sbjct: 3   RNRENGSLRKEDIGQLVQLVGWVNTRRNFGSMIFVDLRDRSGLVQLVIQEEDIPE--VKE 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +RSE+VL ++G V  R  +  N  + TG IE+   K+ +L+ ++  P P+  + E  E  
Sbjct: 61  IRSEYVLQVEGKVALR--KDPNPKLETGDIEVLVSKMVVLNRSKTTPFPIKDDSESLEET 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +YR+LDLRR  L KN+  R ++ ++ R  +  + F+E  TP L  S+PEGARD+LVPS
Sbjct: 119 RLQYRYLDLRRPVLQKNLWLRAKVKSAARRSLEEQGFLEIDTPTLARSTPEGARDYLVPS 178

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G F+ALPQ+PQ YKQL M +G D+Y+QIA C+RDED R+DR P EF Q+D+EMSF 
Sbjct: 179 RIYPGKFWALPQSPQIYKQLCMIAGLDKYYQIARCYRDEDLRADRQP-EFNQIDIEMSFA 237

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++DI   +E +++ +++E +    +   F RI Y D++ RYG+DKPDLR    + N+ +
Sbjct: 238 DEEDIFTVVEKLMKAIWKE-TKEIELKTPFERIPYLDSLDRYGSDKPDLRFGNEIQNMKK 296

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQPGLAYIFWRL 363
            F  SEF  F + L                  +R   D++ ++ +   G   LAY+    
Sbjct: 297 IFEKSEFVGFQEGLKDTGTIGALYFENAANQYSRKALDQLQDFVKHGFGVQALAYLK--- 353

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
               N +  G + K ++    + +  +L +Q+      I+G   +  S     R  +A+E
Sbjct: 354 --KENGSYTGSIRKVMSEEELKHLDEKLQVQNNGLVLLISGIKNRTLSALGALRVRLAKE 411

Query: 424 LGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           L +I     + F W+ DFP +E++EEEK+    H+PFT  +        +D   + A  Y
Sbjct: 412 LNLIPEGENYHFAWVTDFPMFEYSEEEKRWVATHHPFTAIREKDIPYLVSDPQRVLARAY 471

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG+E+ SG IR H  EV  + F ++G++ E  + +FG    AFQ G PPHGG+  G
Sbjct: 472 DLVLNGYELLSGSIRIHSQEVQEKVFESIGLTFEQAKEKFGFFLEAFQYGAPPHGGVGIG 531

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           ++R++M L    N+R+V  FP + +  DL+  SP+ V  EQL  +G+ I +
Sbjct: 532 LERLIMCLAHTDNIRDVVAFPTTNSSMDLMSQSPNKVETEQLNVVGIEIKK 582


>gi|163815548|ref|ZP_02206921.1| hypothetical protein COPEUT_01713 [Coprococcus eutactus ATCC 27759]
 gi|158449185|gb|EDP26180.1| hypothetical protein COPEUT_01713 [Coprococcus eutactus ATCC 27759]
          Length = 583

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 257/593 (43%), Positives = 364/593 (61%), Gaps = 19/593 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR  +  ++   DVG  ++++GWV  +R HGG+ F+D+RD YG+ QVV    S    I K
Sbjct: 7   YRNRTMNEITEGDVGQTLKVAGWVENIRDHGGVSFIDLRDMYGVLQVVMRDTSLLDGITK 66

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
                  + I+G+V  R  ET N  I TG IEL A+ +EIL    +++P  +   +E  E
Sbjct: 67  E----DCVSIEGIVEHRDEETYNPKIPTGTIELEAKTVEILGKVYKQIPFEIQTSKETRE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  N++ R+++I+ +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 123 DVRLKYRYLDLRNKKVKDNMIFRSQVISYLRQKMTEMGFLEIQTPILCASSPEGARDYIV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 183 PSRKFKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   FE+F+          +  I Y  A+  +GTDKPDLRNP+ + 
Sbjct: 243 FATQEDVFKVGEEVLSATFEKFAPEGAVVTQAPYPIISYKQAMLEFGTDKPDLRNPLRII 302

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F    F+ F              +  K    ++   ++M ++A+S G  GL Y+ 
Sbjct: 303 DLTDFFQRCTFKPFH-----GKTVRAINVHKK---LSKGQHEKMLKFAQSIGMGGLGYLE 354

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D    ++  GP+ K +       I     +  GD+ FFIA  P    SFA   R  +
Sbjct: 355 ILDD----MSYKGPIDKFIPDDMKGEIAELAGLTAGDTIFFIADTPEIAASFAGQIRVEL 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
              L +   N F FC+I DFP YE+++E KKI F HNPF+MPQGG+E+L   D L I A+
Sbjct: 411 GNRLDLNEKNAFRFCYINDFPMYEYDKESKKIIFTHNPFSMPQGGLEALNEKDPLDILAY 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G +++ ++ +FG LY AFQ G PPH G+A
Sbjct: 471 QYDIVCNGIELSSGAVRNHDMKIMVKAFEIAGYTEDDLKEKFGALYNAFQFGAPPHAGMA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR++MLL   +N+REV  FPM+ N  DL+ G+P  V+ +QLRE+ +++ +
Sbjct: 531 PGVDRMIMLLRNEENIREVIPFPMNGNAQDLMCGAPGEVTEQQLREVHIKVRQ 583


>gi|183221477|ref|YP_001839473.1| aspartyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911564|ref|YP_001963119.1| aspartyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|238687780|sp|B0SB35|SYD_LEPBA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238687852|sp|B0SSV7|SYD_LEPBP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167776240|gb|ABZ94541.1| Aspartate--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779899|gb|ABZ98197.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase; AspRS)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 601

 Score =  544 bits (1401), Expect = e-152,   Method: Composition-based stats.
 Identities = 222/591 (37%), Positives = 328/591 (55%), Gaps = 19/591 (3%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEW 69
           +  + VG  + LSGW  R R  GG+IF+D+RD  GI Q+VA  +     F   + +RSE+
Sbjct: 18  VSDASVGKTLFLSGWAFRYRDQGGVIFIDLRDRSGILQIVARKEILGDDFSKVEKIRSEF 77

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           V+ + G +  R A++IN  + TG+ EL A+ +EIL+ ++  P  +       E IR KYR
Sbjct: 78  VIAVKGKLSLRDADSINPKMETGKYELIAESVEILNSSKTPPFTLDEFDPSGEEIRLKYR 137

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           +LD+RR+ L   +V R ++  ++R  + +++F+E  TPIL  S+PEGARDFLVPSR+N G
Sbjct: 138 YLDMRREELRDRLVLRHKLTFALREYLDSKSFLEIETPILNKSTPEGARDFLVPSRLNAG 197

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            FYALPQ+PQ +KQ+LM  G +RYFQI  CFRDED R+DR P EF QLDME SFV ++DI
Sbjct: 198 EFYALPQSPQLFKQILMIGGMERYFQIVKCFRDEDLRADRQP-EFTQLDMEFSFVTEEDI 256

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
              +E +     ++       +  F+ + Y  A+  YG+DKPD+R  + + NV+EH    
Sbjct: 257 RREIEAMWAFALKKVFQLEVNA-PFMTMPYHVAMEEYGSDKPDIRFGMKLVNVSEHVKSC 315

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW-ARSQGQPGLAYIFWRLDESGN 368
           +F+VF+  ++     +   +P  G   +R   + +  W +R     GLAY+       G 
Sbjct: 316 DFQVFTGAITSGGVVKAICVP-GGSVISRKEIEDLTAWLSRDYRAKGLAYMK-----HGA 369

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
                 + K  +    EAI   +  ++GD  FF A       +     R  ++++     
Sbjct: 370 NGLESTITKRFSPEALEAIAKAVGSKEGDMVFFGADSSKIVNASLGALRLKLSEKYD-PP 428

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-------ESLKGNDLLSIKAFQ 481
              + F W++DFP +E +E  K   F H+PFT P+          +  K  DL SI A  
Sbjct: 429 KVPYSFHWVVDFPMFEIDETTKSWTFLHHPFTSPKEEDFQKLRDWKDGKEVDLSSIGAKA 488

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G IR H  E+       +GI +E  +++FG L  A   G PPHGGIA 
Sbjct: 489 YDLVLNGTEIGGGSIRIHNPEIQSLVLEAIGIGEEDAKSKFGFLLDALSFGAPPHGGIAF 548

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           G+DRI+MLL G  ++R+V  FP +Q    ++  +P  V  +QL EL LR+V
Sbjct: 549 GVDRIMMLLTGGTSIRDVIAFPKTQKGTCMMSEAPGPVEAKQLEELKLRVV 599


>gi|330813925|ref|YP_004358164.1| aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase
           unambiguous [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487020|gb|AEA81425.1| aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase
           unambiguous [Candidatus Pelagibacter sp. IMCC9063]
          Length = 547

 Score =  543 bits (1399), Expect = e-152,   Method: Composition-based stats.
 Identities = 269/549 (48%), Positives = 377/549 (68%), Gaps = 4/549 (0%)

Query: 47  ITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV 106
           +TQ V   DS+ FE  + ++ E V+ I G  + R+A+ INA + TG++E+    +E+L  
Sbjct: 1   MTQCVVQKDSSHFEEIEKLKLETVIKITGSCIKRAADAINAELDTGEMEVVVDSMEVLGS 60

Query: 107 AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
             ELP+PVF ++EY E IR KYRFLDLRR  +H+NI+ R+++I+ +R +M    F+E  T
Sbjct: 61  CGELPMPVFSDQEYSEDIRLKYRFLDLRRKKIHQNIILRSKVISFIRDKMSQLGFLEFQT 120

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           PILTASSPEGARDFLVPSR+N G FYALPQAPQQ+KQL+M +GFD+YFQIAPCFRDED R
Sbjct: 121 PILTASSPEGARDFLVPSRLNPGKFYALPQAPQQFKQLIMVAGFDKYFQIAPCFRDEDAR 180

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +DR PGEFYQLD+EMSFVEQ+DI   +E ++  VF +FS    +S  F RI YDDA+ +Y
Sbjct: 181 ADRSPGEFYQLDIEMSFVEQEDIFTILEKLMNDVFSQFSKKKVISKVFPRISYDDALLKY 240

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           GTDKPDLRNP+++++ T+ F+  E  F +F K++             K     R+F D +
Sbjct: 241 GTDKPDLRNPLMIYDTTDLFLSEEVKFEIFKKLIKQGSLVRAIKT-TKTSEQPRSFFDGI 299

Query: 345 NEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG 404
           ++WA+ QG  GLAY+    + +  ++G GP+ K  +    + +    + + GDS FF  G
Sbjct: 300 DKWAKEQGASGLAYLTI-ENNNNVLSGKGPIGKLFSETAIKELMKLCEAEVGDSIFFACG 358

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
              +    +A AR+ IA EL +I+ N F FCWI+D+P +E +    KIDF+HNPF+MPQG
Sbjct: 359 KKSEVEKLSAIARDKIANELKLIDENTFAFCWIVDYPMFEQDPATNKIDFSHNPFSMPQG 418

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
            ME++  N+ L+IKA+QYD+VCNG E++SG IRNH  E+M + F   G SK+ V+++F G
Sbjct: 419 KMENIDFNNPLNIKAYQYDIVCNGIELSSGAIRNHKPELMYKLFGIAGYSKDQVDDKFSG 478

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           +  A   G PPHGGIA G+DRIVMLL   KN+REV++FPM+Q   DL+M +PS V+ +QL
Sbjct: 479 MINALSYGAPPHGGIAPGLDRIVMLLADEKNIREVTMFPMNQGAQDLMMNAPSDVTDQQL 538

Query: 585 RELGLRIVE 593
           +EL L+ ++
Sbjct: 539 KELNLKKIK 547


>gi|229496467|ref|ZP_04390182.1| aspartyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316607|gb|EEN82525.1| aspartyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 553

 Score =  543 bits (1399), Expect = e-152,   Method: Composition-based stats.
 Identities = 211/566 (37%), Positives = 305/566 (53%), Gaps = 17/566 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YRT++CG+L    +GS V L+GWV ++R  G + FLD+RD YGITQ+V +      + A
Sbjct: 1   MYRTNTCGELRKEHIGSEVTLAGWVSKLRRMGAMAFLDLRDRYGITQLVFDSAHPELQSA 60

Query: 63  -KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
              V  E VL   G+V  RSA+  N  I TG IEL      +L+ +E  P  +    +  
Sbjct: 61  LDGVGRECVLQATGMVRERSAK--NDKIATGDIELEVTSCRVLNPSEVPPFTIEDNSDGG 118

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           + +R KYR+LDLRRD + +NI  R R+    R  +    F+E  TP+L  S+PEGARDF+
Sbjct: 119 DDLRMKYRYLDLRRDPVKRNIELRHRMALLTRNYLDRLGFLEIETPMLIKSTPEGARDFV 178

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N   FYALPQ+PQ +KQLLM +G DRYFQI  CFRDED R+DR P EF Q+D EM
Sbjct: 179 VPSRMNPNEFYALPQSPQTFKQLLMVAGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCEM 237

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+DIL   E +   +F +       +  F R+ + +A+  YG+DKPDLR  + +  
Sbjct: 238 SFVDQEDILTVFEGLAVELFSKIREVT-PATPFRRMSWYEAMNSYGSDKPDLRFGMPIRE 296

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAYI 359
           +T         +  +       Y             R   D + ++ +    G  GL +I
Sbjct: 297 ITTLAQGHGMSLMDEAA-----YVGAIAVEGAAEYTRKQIDALTDYVKRPQVGAKGLIWI 351

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARN 418
               D     +    V K  +    +AI    + + GD    + G +        +  R 
Sbjct: 352 KCNADG----SFKSSVDKFFDADALKAIAQAAEAKSGDLVLILLGTERYSVLKQLSTLRL 407

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           H+A   G+ + N FE  W++DFP  EW+EE ++    H+PFT P+    SL   D  +++
Sbjct: 408 HVADLAGLKDPNKFECLWVVDFPLLEWDEETQRFYAMHHPFTSPKPEDISLLSTDPGAVR 467

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G IR H S++  + F  +G +KE  E +FG L  AF+ G PPHGG
Sbjct: 468 ANAYDMVINGVEVGGGSIRIHDSQLQHKMFEVLGFTKEKAEEQFGFLMNAFKYGAPPHGG 527

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPM 564
           +A G+DR V ++ G  ++R+   FP 
Sbjct: 528 VAFGLDRWVSIMAGLDSIRDCIAFPK 553


>gi|291520810|emb|CBK79103.1| aspartyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 583

 Score =  542 bits (1397), Expect = e-152,   Method: Composition-based stats.
 Identities = 258/593 (43%), Positives = 368/593 (62%), Gaps = 19/593 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR+    ++  SDVG  +R++GWV  +R HGG+ F+D+RD YG+ QVV    S    I K
Sbjct: 7   YRSRILNEISESDVGKTIRVAGWVENIRDHGGVSFIDLRDMYGVLQVVLRDTSLLDGITK 66

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
                  + I+G++  R  ET N  I TG IEL A  I++L     +LP  +   +E  E
Sbjct: 67  EN----CISIEGVIDHRDEETYNPKIPTGTIELEAHSIDMLGKVYHQLPFEIMTSKEIRE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  NI+ R+++I+ +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 123 DVRLKYRYLDLRNQKVKDNIIFRSQVISFLRQKMTEMGFLEIQTPILCASSPEGARDYIV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 183 PSRKFKGRFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+++    E VL   FE+F+    +  +  +  I Y DA+ ++G+DKPDLRNP+ + 
Sbjct: 243 FATQEEVFRVGEEVLTATFEKFAPEGASVTAAPYPVISYKDAMLQFGSDKPDLRNPLRIM 302

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VTE F    F+ F     +        +       ++ F +++ ++A S G  GL Y+ 
Sbjct: 303 DVTEFFQRCTFKPF-----LKRTVRAIRVH---ADMSKGFHEKLLKFATSIGMGGLGYLE 354

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D+    +  GP+ K +     +       ++ GD+ FFIA    +   FA   RN +
Sbjct: 355 VMEDK----SYKGPIDKFIPDDMKQEFAELTGLEVGDTIFFIADKEERANLFAGQLRNEL 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + L +I  N F FC++ DFP YE+N++EKK+DF HNPF+MPQGG+E+L   +   I A+
Sbjct: 411 GERLDLIEKNAFRFCFVNDFPMYEYNKDEKKMDFTHNPFSMPQGGLEALNTMNPEDILAY 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G S+E ++ +FG LY AFQ G PPH G+A
Sbjct: 471 QYDIVCNGVELSSGAVRNHDLDIMVKAFEIAGYSEEDLKTKFGALYNAFQFGAPPHAGMA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR++MLL    N+REV  FPM+ N  DL+ G+P  V+  QLRE  +++ +
Sbjct: 531 PGVDRMIMLLRNEDNIREVIAFPMNGNAQDLMCGAPGVVTETQLREAHIKVRD 583


>gi|325283191|ref|YP_004255732.1| aspartyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324315000|gb|ADY26115.1| aspartyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 575

 Score =  542 bits (1397), Expect = e-152,   Method: Composition-based stats.
 Identities = 218/594 (36%), Positives = 319/594 (53%), Gaps = 22/594 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEI 61
             RT   G+L  +++G  V L GWV   R  GG+IF ++RD  G  QV  +P  +  F  
Sbjct: 1   MKRTALIGELTDANLG-PVTLQGWVSGRRNLGGLIFFELRDRSGAVQVQVDPAQAEAFAQ 59

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +R+E+V  + G    R  E           E+ A  + IL+ A+  P  +    E  
Sbjct: 60  ADELRAEFVAEVTGTYGLRPQEQR--KGGPADYEVLADGVRILNRAKTPPFELDKGGEVS 117

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +YR+LDLRR  + + ++ R+R   ++   M  E FI   TP+LT S+PEGARDFL
Sbjct: 118 EDVRLRYRYLDLRRPEMQRGLMLRSRTWAAITEFMEREGFINIETPMLTRSTPEGARDFL 177

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N+G FYALPQ+PQ +KQ+LM +G+DRY+Q+A CFRDED RSDR P +F QLDMEM
Sbjct: 178 VPSRLNEGEFYALPQSPQLFKQMLMMAGYDRYYQLARCFRDEDLRSDRQP-DFTQLDMEM 236

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+Q+D+L+    +L  +F +      +S    R+ Y +A+ +YG+DKPDLR    + +
Sbjct: 237 SFVDQEDVLDMNSRLLAHIFGQVMGQ-QLSLPLPRLTYQEAMDKYGSDKPDLRFEHALVD 295

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VT+ F   EF+ F+   +V                 R   D +   A+  G  GLA++  
Sbjct: 296 VTDLFAGGEFKAFAGAEAVK--------VIAAPELTRKAIDELERVAKQNGAGGLAWLK- 346

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                G     G ++K +  + T  +  R  ++DG +  F AGD           R  + 
Sbjct: 347 ----RGGEGFTGGISKFVAGI-TPQLLKRTGVEDGGTLLFTAGDWRTAVEALGAVRLALR 401

Query: 422 QELGIINCN-CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND-LLSIKA 479
                      F   W+ DFP  +++++     + H+PFT P     +L G +    I+A
Sbjct: 402 DLFDWTAGGPQFAPLWVTDFPQLDYDKDSGTWTYMHHPFTAPHPDDTALFGTERQHEIRA 461

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NGFEI  G +R H  +   + F  +G+S E  + +FG    A + G PPHGG 
Sbjct: 462 QAYDLVMNGFEIGGGSVRIHSPQTQREMFRAIGLSDEEAQEKFGFFLEALEYGTPPHGGA 521

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G DR+VM+L GA ++R+V  FP +    DL+ G+PS V+  QL ELGLR+ E
Sbjct: 522 AWGFDRLVMVLSGAASIRDVIAFPKNNRGQDLMAGAPSPVAEGQLEELGLRVQE 575


>gi|281418205|ref|ZP_06249225.1| aspartyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|281409607|gb|EFB39865.1| aspartyl-tRNA synthetase [Clostridium thermocellum JW20]
          Length = 581

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 263/592 (44%), Positives = 365/592 (61%), Gaps = 19/592 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRT +   +   D+GS ++++GWV  +R HGG+ F+D+RD YG+ QVV        E  K
Sbjct: 5   YRTKTMNQITEEDIGSVLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVFR----NIEFPK 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122
            +R E  L I+G++  R  ET N  I TG IEL AQK+ +L  V  +LP  V   +E  E
Sbjct: 61  GIRKEECLSIEGVIEKRDEETYNPKIPTGTIELVAQKVTVLGRVYRDLPFEVATSKEIRE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  NI+ R+++I+ +R +M    F+E  TPIL+ASSPEGARD++V
Sbjct: 121 EVRLKYRYLDLRNRKVKDNILFRSQVISFLRQKMTEMGFVEIQTPILSASSPEGARDYIV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR ++G FYALPQAPQ YKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 181 PSRKHKGKFYALPQAPQIYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   F++F+          F    Y  A+  +GTDKPDLRNP+ + 
Sbjct: 241 FATQEDVFRVGEEVLTATFKKFAPEGYEITEAPFPVFSYKQAMLEFGTDKPDLRNPLRII 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT+ F    F+ F      N       +       ++ F +++ E+A S G  GL Y+ 
Sbjct: 301 DVTDFFQRCAFKPFH-----NKTVRAIKVH---ADMSKGFHEKLLEYALSIGMGGLGYLE 352

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D    +   GP+ K++       +     +  GD  FFIA      C +A   RN +
Sbjct: 353 VQED----MTYKGPIDKYIPQELKGELTQIARLIPGDVIFFIADKEKLACKYAGLIRNEL 408

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + L I   N + FC++ DFP YE +EE  KI+F HNPF+MPQGG+E+L   D L I A+
Sbjct: 409 GKRLDICEKNAYRFCYVNDFPMYEMDEETGKIEFTHNPFSMPQGGLEALNTKDPLDILAY 468

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G  +E ++ +FG LY AFQ G PPH G+A
Sbjct: 469 QYDIVCNGVELSSGAVRNHDLDIMVKAFEIAGYDEETLKKKFGALYNAFQYGAPPHAGMA 528

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            GI+R++MLL   +N+REV  FPM+ N  DLL G+P  V+ +QLRE+ ++I 
Sbjct: 529 PGIERMIMLLRNEENIREVVAFPMNSNAQDLLCGAPGEVTEQQLREVHIKIR 580


>gi|125974053|ref|YP_001037963.1| aspartyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256004470|ref|ZP_05429450.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|125714278|gb|ABN52770.1| aspartyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255991611|gb|EEU01713.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|316941300|gb|ADU75334.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 581

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 262/592 (44%), Positives = 364/592 (61%), Gaps = 19/592 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YRT +   +   D+GS ++++GWV  +R HGG+ F+D+RD YG+ QVV        E  K
Sbjct: 5   YRTKTMNQITEEDIGSVLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVFR----NIEFPK 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122
            +R E  L I+G++  R  ET N  I TG IEL AQK+ +L  V  +LP  V   +E  E
Sbjct: 61  GIRKEECLSIEGVIEKRDEETYNPKIPTGTIELVAQKVTVLGRVYRDLPFEVATSKEIRE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  NI+ R+++I+ +R +M    F+E  TPIL+ASSPEGARD++V
Sbjct: 121 EVRLKYRYLDLRNRKVKDNILFRSQVISFLRQKMTEMGFVEIQTPILSASSPEGARDYIV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR ++G FYALPQAPQ YKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 181 PSRKHKGKFYALPQAPQIYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   F++F+          F    Y  A+  +GTDKPDLRNP+ + 
Sbjct: 241 FATQEDVFRVGEEVLTATFKKFAPEGYEITEAPFPVFSYKQAMLEFGTDKPDLRNPLRII 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT+ F    F+ F      N       +       ++ F +++ E+A S G  GL Y+ 
Sbjct: 301 DVTDFFQRCAFKPFH-----NKTVRAIKVH---ADMSKGFHEKLLEYALSIGMGGLGYLE 352

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            + D    +   GP+ K++       +     +  GD  FFIA      C +A   RN +
Sbjct: 353 VQED----MTYKGPIDKYIPQELKGELAQISGLIPGDVIFFIADKEKLACKYAGLIRNEL 408

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + L I   N + FC++ DFP YE +EE  KI+F HNPF+MPQGG+E+L     L I A+
Sbjct: 409 GKRLDICEKNAYRFCYVNDFPMYEMDEETGKIEFTHNPFSMPQGGLEALNTKGPLDILAY 468

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G  +E ++ +FG LY AFQ G PPH G+A
Sbjct: 469 QYDIVCNGVELSSGAVRNHDLDIMVKAFEIAGYDEETLKKKFGALYNAFQYGAPPHAGMA 528

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            GI+R++MLL   +N+REV  FPM+ N  DLL G+P  V+ +QLRE+ ++I 
Sbjct: 529 PGIERMIMLLRNEENIREVVAFPMNSNAQDLLCGAPGEVTEQQLREVHIKIR 580


>gi|323165010|gb|EFZ50800.1| aspartyl-tRNA synthetase [Shigella sonnei 53G]
          Length = 504

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 187/508 (36%), Positives = 279/508 (54%), Gaps = 6/508 (1%)

Query: 89  IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRI 148
           + TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR  + + +  R +I
Sbjct: 1   MATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKI 58

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM S
Sbjct: 59  TSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMS 118

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R ++ E    +
Sbjct: 119 GFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVD 177

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
               +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   +   G     
Sbjct: 178 --LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRVAAL 235

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIR 388
               G    R   D    + +  G  GLAYI       G      PVAK LN    EAI 
Sbjct: 236 RVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAIL 295

Query: 389 VRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE 448
            R   QDGD  FF A +           R  + ++LG+ + + +   W++DFP +E ++ 
Sbjct: 296 DRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFE-DDG 354

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H  ++    F
Sbjct: 355 EGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVF 414

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +   
Sbjct: 415 GILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAA 474

Query: 569 CDLLMGSPSTVSVEQLRELGLRIVENPK 596
             L+  +PS  +   L EL +++V+  +
Sbjct: 475 ACLMTEAPSFANPTVLAELSIQVVKKAE 502


>gi|323972626|gb|EGB67829.1| aspartyl-tRNA synthetase [Escherichia coli TA007]
          Length = 504

 Score =  541 bits (1395), Expect = e-151,   Method: Composition-based stats.
 Identities = 186/508 (36%), Positives = 278/508 (54%), Gaps = 6/508 (1%)

Query: 89  IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRI 148
           + TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR  + + +  R +I
Sbjct: 1   MATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKI 58

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM S
Sbjct: 59  TSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMS 118

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R ++ E    +
Sbjct: 119 GFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVD 177

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
               +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   +   G     
Sbjct: 178 --LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRVAAL 235

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIR 388
               G    R   D    + +  G  GLAYI       G      PVAK LN    E I 
Sbjct: 236 RVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEDIL 295

Query: 389 VRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE 448
            R   QDGD  FF A +           R  + ++LG+ + + +   W++DFP +E ++ 
Sbjct: 296 DRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFE-DDG 354

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H  ++    F
Sbjct: 355 EGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVF 414

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +   
Sbjct: 415 GILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAA 474

Query: 569 CDLLMGSPSTVSVEQLRELGLRIVENPK 596
             L+  +PS  +   L EL +++V+  +
Sbjct: 475 ACLMTEAPSFANPTALAELSIQVVKKAE 502


>gi|15806364|ref|NP_295070.1| aspartyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|24212427|sp|Q9RUN7|SYD_DEIRA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|6459100|gb|AAF10918.1|AE001981_3 aspartyl-tRNA synthetase, discriminating [Deinococcus radiodurans
           R1]
          Length = 577

 Score =  541 bits (1395), Expect = e-151,   Method: Composition-based stats.
 Identities = 223/575 (38%), Positives = 316/575 (54%), Gaps = 20/575 (3%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V L GWV R R  GG+IFL++RD  G  QV   PDS  F  A  +R+E+V  I+G    
Sbjct: 19  TVTLQGWVSRRRDLGGLIFLELRDRSGTVQVQVEPDSPAFAEADRLRAEYVAEIEGTFQP 78

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
           R        +     E+ A ++++L+ A+  P  +       E IR KYR+LDLRR  + 
Sbjct: 79  RPESQRKGGLA--DFEVIASRVKVLNAAKTPPFELDKGESVAEDIRLKYRYLDLRRPEMQ 136

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           + ++ R++ + ++   + AE FI+  TP+LT S+PEGARDFLVPSR+N G FYALPQ+PQ
Sbjct: 137 RALMLRSKAVTAVTEFLDAEGFIQVETPMLTKSTPEGARDFLVPSRLNPGEFYALPQSPQ 196

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            +KQLLM +GFDRY+Q+A CFRDED R+DR P +F QLDMEMSFVEQDD+L   E +L  
Sbjct: 197 LFKQLLMIAGFDRYYQLARCFRDEDLRADRQP-DFTQLDMEMSFVEQDDVLEVQERLLAH 255

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           VF    +   +   F R+ Y DA+ RYG+DKPDLR      +VT  F   EF  F+   S
Sbjct: 256 VFRRVLDVE-LPLPFPRMSYFDAMDRYGSDKPDLRFDSAFTDVTGLFRGGEFAAFASAPS 314

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
           V                 R   D +   A+  G  GLA++  R D  G     G ++K +
Sbjct: 315 VKVLV--------APELTRKQIDELERVAKQNGAGGLAWL--RRDGEG---FTGGISKFV 361

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN-CFEFCWIM 438
             +    +  +  +  G +  F AG+  K  +     R  +     +      F   W++
Sbjct: 362 GGI-APQLIEQTGVAQGGTLLFAAGEWKKAVTALGAVRLALRDLFDLAAGGPQFHVSWVV 420

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND-LLSIKAFQYDLVCNGFEIASGGIR 497
           DFP  E++E+ +   + H+PFT P  G  +L G +    ++A  YDLV NGFEI  G +R
Sbjct: 421 DFPQLEFDEDSQSWTYMHHPFTAPHPGDVALFGTERQGEMRAQAYDLVMNGFEIGGGSVR 480

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            H  EV  + F  +G S+E    +FG    A + G PPHGGIA G DR++ML+ GA ++R
Sbjct: 481 IHDPEVQAKMFQAIGFSEEAAREKFGFFLDALEYGTPPHGGIAWGFDRLLMLMSGAGSIR 540

Query: 558 EVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           EV  FP +    DL+  +PS V   QL E+G+++ 
Sbjct: 541 EVIAFPKNNRGADLMAQAPSPVEDAQLAEVGVQVR 575


>gi|111115273|ref|YP_709891.1| aspartyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123145714|sp|Q0SN63|SYD_BORAP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110890547|gb|ABH01715.1| aspartyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 586

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 225/593 (37%), Positives = 340/593 (57%), Gaps = 10/593 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++   C +L    +   V ++ WV ++R HG   FLDIRD Y   QV+   +    +I 
Sbjct: 1   MFKVIKCNELNEKLINKKVEINAWVKKIRHHGKFTFLDIRDRYEKAQVLIT-EEHLLKIV 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++ E+ + I GL++ R +  INAN+ TG  E+ A+ IEI+S   ELP  +  +    E
Sbjct: 60  EKIKLEYCIKIQGLLIKRPSNMINANMTTGYFEILAKNIEIISKCNELPFMIEDDNNASE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + KYR+LDLRRD+L   I+ R +  + +R  ++   F+E  TP    S+PEGARDF++
Sbjct: 120 NSKLKYRYLDLRRDSLKNKIILRCQATHLIRNFLVKRKFLELETPTFVKSTPEGARDFVI 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++++I   +EN+L  +F+   N   +S  F +I Y  A+ +YG+DKPD R  + + ++
Sbjct: 239 FVKKENIFKLIENMLFSIFKNCLNIK-LSKKFKKITYKTAMNKYGSDKPDTRFELTLQDI 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           + +  +SEF VF  IL+     +   +  K    +RA  + + E A+     GL +    
Sbjct: 298 SRNLKNSEFNVFKDILNNKGSIKTLIVKDKADTFSRAKINNLEEIAKLYKTQGLYFTKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHIA 421
                N    G +AK L     + I+    +++ D  FFI        C      R  IA
Sbjct: 358 -----NNKFSGGIAKFLKTEEQQLIK-AYSLENNDIIFFIANNKWEIACKAMGQIRIKIA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+    S    +        
Sbjct: 412 NDLGLIDENKFEFLWVYDFPLFEYDENTKTYIPAHHMFSIPKKRYISNLEKNPNKAIGEI 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ I  +
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIAPD 584


>gi|216263666|ref|ZP_03435661.1| aspartyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215980510|gb|EEC21331.1| aspartyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 586

 Score =  540 bits (1390), Expect = e-151,   Method: Composition-based stats.
 Identities = 224/591 (37%), Positives = 338/591 (57%), Gaps = 10/591 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++   C +L    +   V ++ WV ++R HG   FLDIRD Y   QV+   +    +I 
Sbjct: 1   MFKVIKCNELNEKLINKKVEINAWVKKIRHHGKFTFLDIRDRYEKAQVLIT-EEHLLKIV 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++ E+ + I GL++ R +  INAN+ TG  E+ A+ IEI+S   ELP  +  +    E
Sbjct: 60  EKIKLEYCIKIQGLLIKRPSNMINANMTTGYFEILAKNIEIISKCNELPFMIEDDNNASE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + KYR+LDLRRD+L   I+ R +  + +R  ++   F+E  TP    S+PEGARDF++
Sbjct: 120 NSKLKYRYLDLRRDSLKNKIILRCQATHLIRNFLVKRKFLELETPTFVKSTPEGARDFVI 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++++I   +EN+L  +F+   N   +   F +I Y  A+ +YG+DKPD R  + + ++
Sbjct: 239 FVKKENIFKLIENMLFSIFKNCLNIK-LPKKFKKITYKMAMNKYGSDKPDTRFELTLQDI 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           + +  +SEF VF  IL+     +   +  K    +RA  + + E A+     GL +    
Sbjct: 298 SRNLKNSEFNVFKDILNNKGSIKTLIVKDKADTFSRAKINNLEEIAKLYKTQGLYFTKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKFCSFAADARNHIA 421
                N    G +AK L     + I+    +++ D  FFI        C      R  IA
Sbjct: 358 -----NNKFSGGIAKFLKTEEQQLIK-AYSLENNDIIFFIANNKWEIACKAMGQIRIKIA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+    S    +        
Sbjct: 412 NDLGLIDENKFEFLWVYDFPLFEYDENTKTYIPAHHMFSIPKKRYISNLEKNPNKAIGEI 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ I 
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIA 582


>gi|154483437|ref|ZP_02025885.1| hypothetical protein EUBVEN_01140 [Eubacterium ventriosum ATCC
           27560]
 gi|149735689|gb|EDM51575.1| hypothetical protein EUBVEN_01140 [Eubacterium ventriosum ATCC
           27560]
          Length = 598

 Score =  540 bits (1390), Expect = e-151,   Method: Composition-based stats.
 Identities = 251/593 (42%), Positives = 371/593 (62%), Gaps = 19/593 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR  +  ++   +VG  VR++GW+  +R HGG+ F+D+RD YG+ QVV    S    + +
Sbjct: 22  YRDVTMDNISEKNVGETVRIAGWIENIRDHGGVSFIDLRDMYGVMQVVMRDTS----LLE 77

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
            +  E  + ++G +  R  ET N  I TG IEL A+ ++IL    ++LP  +   +E  E
Sbjct: 78  GLNKEDCISVEGPIEHRDEETYNPKIPTGTIELEAKSVDILGKVYKQLPFEIMTSKETRE 137

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  N++ R+++I+ +R +M+   F+E  TPIL ASSPEGARD++V
Sbjct: 138 DVRLKYRYLDLRNAKVKDNMIFRSKVISYLREKMVEMGFLEIQTPILCASSPEGARDYIV 197

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 198 PSRKFKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 257

Query: 243 FVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   F +F+          F  I Y  A+  +G+DKPDLRNP+ + 
Sbjct: 258 FATQEDVFRVGEKVLADTFNKFAPEGYEVTQAPFPIISYKQAMLEFGSDKPDLRNPLRII 317

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F    F+ F          +           ++ F +++ ++A+S G  GL Y+ 
Sbjct: 318 DLTDFFQRCTFKPF--------HGKTVRAIKVHADMSKGFHEKLLKFAQSIGMGGLGYLE 369

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D+    +  GP+ K +     E IR    ++ GD+ FFIA +      +A   R  +
Sbjct: 370 VMEDK----SYKGPIDKFIPDDMKEEIRETAGLEVGDTIFFIADNEKNAALYAGQIRTAL 425

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            + L +I  N F+FC+I DFP YE+++E KK++F HNPF+MPQGG+E+L+  D   I A+
Sbjct: 426 GERLDLIEKNSFKFCYINDFPMYEYDKETKKMEFTHNPFSMPQGGLEALETMDPEEILAY 485

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G ++E ++ +FG LY AFQ G PPH G+A
Sbjct: 486 QYDIVCNGVELSSGAVRNHDMKIMVKAFEIAGYTEEDLKEKFGALYNAFQFGAPPHAGMA 545

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR++MLL   +N+REV  FPM+ N  DL+ G+P  V+ +QLRE+ +++ +
Sbjct: 546 PGVDRMIMLLRDEENIREVIPFPMNGNAQDLMCGAPGEVTEQQLREVHIKVRQ 598


>gi|255082085|ref|XP_002508261.1| predicted protein [Micromonas sp. RCC299]
 gi|226523537|gb|ACO69519.1| predicted protein [Micromonas sp. RCC299]
          Length = 666

 Score =  539 bits (1389), Expect = e-151,   Method: Composition-based stats.
 Identities = 218/601 (36%), Positives = 333/601 (55%), Gaps = 16/601 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           R  +CG L   D G  V L GWV + R  GGI+F D+RDH G  QVV++ D+     +  
Sbjct: 68  RDQTCGTLREQDEGRTVTLCGWVDKQRDMGGIVFADVRDHTGFVQVVSDADTPKEATDAL 127

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
            ++R+EWV+C+ G V  R+A   N  + TG +E++A K+ +L+    +    +    E +
Sbjct: 128 AAMRAEWVVCVTGRVKKRTAP--NDKVPTGAVEVAADKVTVLNTVAKSLPFSISGAPEGD 185

Query: 120 YPE---SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPE 175
             E    +R K R LDLRR  + +N+  R + + ++R  +    +F+E  TPILT S+PE
Sbjct: 186 DDELREEVRLKNRVLDLRRPQMVRNLRLRAKTVRALRKVLEDTHDFLEVETPILTRSTPE 245

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GARD+LVPSR+  G+ +ALPQ+PQ +KQ+LM +G DRY+Q+A CFRDED R+DR P EF 
Sbjct: 246 GARDYLVPSRLQPGACFALPQSPQLFKQMLMVAGADRYYQVARCFRDEDLRADRQP-EFT 304

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           QLD+EMSF + D ILN  E+++   F+E ++ + +   F R+ Y +A+ +YG+DKPD+R 
Sbjct: 305 QLDIEMSFTDMDGILNLGEDLMCAAFKEGADVD-LPRPFRRMTYAEAMSKYGSDKPDVRY 363

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
            + M  + +    +EF++F+  +      +  A+P      N     + + +  +     
Sbjct: 364 GLEMAELADVVAGTEFKLFAGAVEAGGVVKAIAVPQGSRISNSRLKPKGDVFNEAIAGGA 423

Query: 356 LAYIFWRLDESG-NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
               F R+ E G  + G   + + L     E +  R     GD   F AGD         
Sbjct: 424 GGLAFARVGEDGVTLEGGKALCEGLQP-VAEKLIARCGAGAGDLLLFGAGDEGTVNKAMD 482

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  +A+ L ++        WI DFP +EWNE+E +++  H+PFT P     +  G D+
Sbjct: 483 RVRQFVAKTLDMVPEGQHAVLWITDFPMFEWNEDENRLEALHHPFTAPNQEDVA-NGGDI 541

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
              +A  YDLV NG E+  G +R +  +V  + F  +G+ KE  E +FG L  AFQ G P
Sbjct: 542 KQARAIAYDLVYNGVEVGGGSLRIYRRDVQEKVFDAIGLGKEEAEEKFGYLMEAFQFGAP 601

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DR+VM+L GAK++R+V  FP +     LL  +P  VS  Q+ EL +   + 
Sbjct: 602 PHGGMAFGLDRLVMMLAGAKSIRDVIAFPKTATAQCLLTAAPGDVSDSQMAELHIAKAKR 661

Query: 595 P 595
            
Sbjct: 662 E 662


>gi|94501012|ref|ZP_01307536.1| aspartyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94426759|gb|EAT11743.1| aspartyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 515

 Score =  539 bits (1388), Expect = e-151,   Method: Composition-based stats.
 Identities = 194/520 (37%), Positives = 297/520 (57%), Gaps = 6/520 (1%)

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V +R A + N N+ TG+IE+  ++I +L+ A   P P+       E +R +YR++DLRRD
Sbjct: 2   VRARPAGSENENMPTGKIEVLGKEITVLNKAATPPFPLDEYSPVGEDVRLRYRYMDLRRD 61

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +  N+  R ++   +R  +  + F++  TPILT ++PEGARD+LVPSR +QGSF+ALPQ
Sbjct: 62  EMQHNLRFRHKVTTQIRNILDEQGFLDIETPILTRATPEGARDYLVPSRTHQGSFFALPQ 121

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ +KQLLM SGFDRY+QIA CFRDED R+DR P EF Q+DME SFVE+ DI+   E++
Sbjct: 122 SPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQP-EFTQIDMEASFVEEKDIMGAAESM 180

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           ++ +F+     +     F  + Y +A+ +YG+DKPDLR P+ + +V +     EF+VF+ 
Sbjct: 181 IKQIFQTQKGIDLGE--FPHMPYSEAMNKYGSDKPDLRIPMELVDVADLLQDIEFKVFAG 238

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
                 G         G   +R   D   ++    G  GLA+I     E G      P+ 
Sbjct: 239 PAKDPKGRVAALKVPGGAELSRKQIDEYTKYVGIYGAKGLAWIKVNEIEKGVEGLQSPII 298

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K +   NT  I  RL++++GD  FF A   +         R  +  +L ++ C  +   W
Sbjct: 299 KFIGDDNTMKIMDRLEVKNGDIVFFGADKEVIVNEALGALRVKLGHDLNMLTCE-WAPLW 357

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           ++DFP +E   E+ K+   H+PFT P    E LK N   +  +  YD+V NG E+  G I
Sbjct: 358 VVDFPMFE-ELEDGKLHAIHHPFTAPSCSPEELKAN-PTAALSRAYDMVLNGCELGGGSI 415

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H   +    F  + IS+E    +FG L  A Q G PPHGG+A G+DR++ML+ G++++
Sbjct: 416 RIHDQAMQQTVFEILNISEEEQREKFGFLLDALQFGAPPHGGLAFGLDRLIMLMTGSESI 475

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           REV  FP +Q+   ++  +P  V  + LRE+G+++    +
Sbjct: 476 REVIAFPKTQSAACVMTDAPGEVPTKNLREVGIQLRPKAE 515


>gi|160893895|ref|ZP_02074674.1| hypothetical protein CLOL250_01449 [Clostridium sp. L2-50]
 gi|156864273|gb|EDO57704.1| hypothetical protein CLOL250_01449 [Clostridium sp. L2-50]
          Length = 608

 Score =  538 bits (1386), Expect = e-150,   Method: Composition-based stats.
 Identities = 252/593 (42%), Positives = 368/593 (62%), Gaps = 19/593 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR  +  ++   DVG+ ++++GW+  +R HGG+ F+D+RD YG+ QVV    S    +  
Sbjct: 32  YRNRTLNEISEGDVGAELKVAGWIENIRDHGGVSFIDLRDMYGVLQVVMRDTS----LLD 87

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122
            +  E  + I G++  R  ET N  I TG IEL A  +E+L  V +++P  +   +E  E
Sbjct: 88  GLTKEDCVSISGVIEHRDEETYNPKIPTGTIELEAHSVEVLGRVYKQVPFEIMTSKETRE 147

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  N++ R+++I+ +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 148 DVRLKYRYLDLRNKKVKDNMIFRSQVISFLRQKMTEMGFLEIQTPILCASSPEGARDYIV 207

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM +GFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 208 PSRKFKGKFYALPQAPQQYKQLLMVAGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 267

Query: 243 FVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   FE+F+          +  I Y  A+  +GTDKPDLRNP+ + 
Sbjct: 268 FATQEDVFKVGEEVLSATFEKFAPEGSVVTQAPYPIISYKQAMLEFGTDKPDLRNPLRII 327

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+ F    F+ F              +P K    ++   +++ ++A+S G  GL Y+ 
Sbjct: 328 DLTDFFQRCTFKPFH-----GKTVRAINVPKK---LSKGQHEKLLKYAQSIGMGGLGYLE 379

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D    +   GP+ K +       I    +++ GD+ FFIA       SFA   RN I
Sbjct: 380 VLDD----MTYKGPIDKFIPDDMKSEIAELANLKAGDTIFFIADVEELAASFAGQLRNEI 435

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
              L +I  N + FC+I DFP YE+++E KKI F HNPF+MPQGG+E+L   + L + A+
Sbjct: 436 GARLDMIEKNAYRFCYINDFPMYEYDKETKKIIFTHNPFSMPQGGLEALNEKNPLDVLAY 495

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G ++E ++ +FG LY AFQ G PPH G+A
Sbjct: 496 QYDIVCNGIELSSGAVRNHDMQIMVKAFEIAGYTEEDLKTKFGALYNAFQFGAPPHAGMA 555

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR++MLL   +N+RE+  FPM+ N  DL+ G+P  V+ +QLRE+ +++ +
Sbjct: 556 PGVDRMIMLLRNEENIREIIPFPMNGNAQDLMCGAPGEVTEQQLREVHIKVRQ 608


>gi|325688127|gb|EGD30146.1| aspartate--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 578

 Score =  538 bits (1386), Expect = e-150,   Method: Composition-based stats.
 Identities = 198/584 (33%), Positives = 316/584 (54%), Gaps = 12/584 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N +I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++        + F  I YD+A+ R+G+DKPD R  + + N+T+    
Sbjct: 245 IRALVEAMLKAVVKKTHGLELTED-FPTISYDEAMSRFGSDKPDTRFGLELKNLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           +E  +  K L          +P      ++       +  +  G    A +       GN
Sbjct: 304 NESLLIKKALDSQEEVMGICVPDAASAFSKKQLSHYYQEMKEFGCSRFASLKV-----GN 358

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
              +G +A       ++ +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 359 GQLVGDLASTF-EAESQELLERFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT          G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFED----GQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L + 
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLELK 577


>gi|59801827|ref|YP_208539.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|59718722|gb|AAW90127.1| putative aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 516

 Score =  538 bits (1386), Expect = e-150,   Method: Composition-based stats.
 Identities = 194/522 (37%), Positives = 303/522 (58%), Gaps = 15/522 (2%)

Query: 89  IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRI 148
           +I+G+IE+ A++IE+L+ A   P  +  E    E++R   R +DLRR  + +N+  R ++
Sbjct: 1   MISGKIEILAKEIEVLNAAATPPFQIDDE-NISENVRLTNRVIDLRRPVMQRNLRLRYQV 59

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
              +R  + A+ FI+  TP+LT S+PEGARD+LVPSRV+ G F+ALPQ+PQ +KQLLM +
Sbjct: 60  ATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFALPQSPQLFKQLLMVA 119

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDRY+QI  CFRDED R+DR P EF Q+D+E SF+ +D+I++  E + + VF++  N +
Sbjct: 120 GFDRYYQITKCFRDEDLRADRQP-EFTQIDLETSFLNEDEIMDITEGMAKQVFKDALNVD 178

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
               +F R+ Y +A+  YG+DKPD+R  +    +T+     EF+VF     +  G  V  
Sbjct: 179 --LGDFPRMPYSEAMFYYGSDKPDMRINLKFTELTDLMKTEEFKVFRGAADMKGGRVVAL 236

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG------MGPVAKHLNIV 382
               G   +R   D   ++    G  GLAYI  +++++GN++         P+ K L+  
Sbjct: 237 RVPNGAKFSRKEIDEYTKFVGIYGAKGLAYI--KVNDAGNLSNGEDSGLQSPIVKFLSEN 294

Query: 383 NTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN---CNCFEFCWIMD 439
             + I  R   Q+GD  FF A             R  +  E G  N    + ++  W++D
Sbjct: 295 ALKEIIERTAAQNGDIIFFGADKAKVVNEAVGALRIKVGLEHGKDNGYFTDEWKPLWVVD 354

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           FP +E++EE  +    H+PFT P+ G E L  +D  +  A  YD+V NG+EI  G IR H
Sbjct: 355 FPMFEYDEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIH 414

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
            ++V  + F+ + IS E  + +FG L    + G PPHGG+A G+DR+V L+ GA+++R+V
Sbjct: 415 RADVQGKVFAALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDV 474

Query: 560 SLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKI 601
             FP +Q    LL  +P++V  +QLREL LR+ +   +  + 
Sbjct: 475 IAFPKTQRAQCLLTDAPNSVDDKQLRELSLRLRQKAVETKEA 516


>gi|167747219|ref|ZP_02419346.1| hypothetical protein ANACAC_01933 [Anaerostipes caccae DSM 14662]
 gi|167653197|gb|EDR97326.1| hypothetical protein ANACAC_01933 [Anaerostipes caccae DSM 14662]
          Length = 589

 Score =  538 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 259/594 (43%), Positives = 361/594 (60%), Gaps = 19/594 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YR+ +   +  SD+GS ++++GWV  +R HGG+ F+D+RD YG+ QVV        ++ 
Sbjct: 12  MYRSKTMDKISESDIGSQLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVLRD----ADLL 67

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYP 121
             VR E  L I+G++  R  ET N  I TG IEL A KI +L     +LP  V G +E  
Sbjct: 68  NEVRKEECLSIEGVIEHRDEETYNPKIPTGTIELEAHKITVLGKVYTDLPFEVSGSKEIR 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLR   +  NI  R+ +I+ +R +M    F+E  TPIL ASSPEGARD++
Sbjct: 128 EDVRLKYRYLDLRNRKVKDNIKFRSEVISFLRRKMDDLGFMEIQTPILCASSPEGARDYI 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR  +G FYALPQAPQQYKQLLM SG D+Y+Q+APCFRDED R+DR PGEFYQLD EM
Sbjct: 188 VPSRKYKGKFYALPQAPQQYKQLLMVSGIDKYYQVAPCFRDEDARADRSPGEFYQLDFEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           SF  Q+D+    E VL   F++F+          F  I Y  A+  +GTDKPDLRNP+ +
Sbjct: 248 SFATQEDVFKIGEEVLAETFKKFAPEGSVVTDTPFPVISYQQAMLEFGTDKPDLRNPLRI 307

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VT+ F    F+ F          +           ++ F +++ ++A+S G  GL Y+
Sbjct: 308 VDVTDFFQRCTFKPFHD--------KTVRAVKVHANLSKGFHEKLLKFAQSIGMAGLGYL 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             + D    ++  GP+ K +       +  +  ++ GD  FFIA      C FA   R+ 
Sbjct: 360 EVKED----MSYKGPIDKFIPEDMKSELAEKAHLEAGDVIFFIAASEKPACLFAGQIRDE 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A  L +   N + FC+I DFP YE +EE  ++ F HNPF+MPQGG+E+L   D L I A
Sbjct: 416 LAARLDLCEKNAYRFCYINDFPMYETDEETGQVTFTHNPFSMPQGGLEALNEKDPLDILA 475

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG +RNH  +VM++AF   G  +E ++ +FG LY AFQ G PPH G+
Sbjct: 476 YQYDIVCNGVELSSGAVRNHDLDVMVKAFEIAGYDEETLKEKFGALYHAFQFGAPPHAGM 535

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A GIDR++MLL   +N+REV  FPMS    DL+ G+P  VS  QLRE  +++ +
Sbjct: 536 APGIDRMIMLLRNEENIREVIAFPMSGTAQDLMCGAPGEVSELQLRETHIKVRD 589


>gi|331703342|ref|YP_004400029.1| aspartyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328801897|emb|CBW54050.1| Aspartyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 574

 Score =  538 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 204/591 (34%), Positives = 331/591 (56%), Gaps = 17/591 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RTH+CG+L ++++   V L GWV ++R  G ++F+D++D YGITQ+V +      ++ 
Sbjct: 1   MKRTHTCGELTINNIDQEVILQGWVKKIRKLGAMVFIDLKDRYGITQLVVDQQHI--DLI 58

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +V++E+V+ I G V+ R  ++IN  ++TG+IE+  + + +++ +E  P  +  +    E
Sbjct: 59  NNVKNEYVIEIKGNVVKR--KSINKELVTGEIEVIVKDLLVINKSELTPFVLENDVNVNE 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R  YR+LDLRR  +  N++ R +I + +R  +   NF+E  TP    S+PEGARDFLV
Sbjct: 117 DTRLTYRYLDLRRQVMQNNLIIRAKINHIIRNFLTDSNFLEVETPYFAKSTPEGARDFLV 176

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N+  FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R DR P EF QLD+EMS
Sbjct: 177 PSRLNKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQP-EFTQLDLEMS 235

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +D++   E++++ + +E  N        LR+ Y DAI  YG+DKPDLR  + +H +
Sbjct: 236 FATSEDVMQISESLIKKILKEVRNFEVKEPL-LRLSYKDAIDLYGSDKPDLRYDLKIHTL 294

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            + F ++  +  +     NP   + AI       ++   + +N+ A+      +A+I + 
Sbjct: 295 NDIFKNTNIKFLN-----NPDLFIRAICI-DQLLSKKQLEDLNQQAKQFNFNSIAFIKFE 348

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +        G +A  L     E +    D+++  +     G   +        R  +A+
Sbjct: 349 NNN-----WSGSLASQLTENEKELLIKEFDIKNKATIILNIGKYAEISQLMGAIRISLAK 403

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              +   + F+  W++DFP +E++E+E +   AH+PFT P+    +    +     A  Y
Sbjct: 404 MFNLETKDDFKLLWVVDFPLFEFSEKENRYVAAHHPFTSPKEECLTDFDTNKKDALACAY 463

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NGFEI  G  R    E+  + F  V ++ + VE  FG    A++ G P H GIA G
Sbjct: 464 DLVMNGFEIGGGSQRITNPEIQQRMFDAVELTAQQVETNFGWFMNAYKYGAPYHAGIAWG 523

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DRI M+L  + ++R+V  FP +    D++  +P  VS +QL EL ++IV+
Sbjct: 524 LDRISMILTDSNSIRDVIAFPKNSLGIDMMSNAPDLVSEKQLEELNIKIVK 574


>gi|327461765|gb|EGF08096.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327489050|gb|EGF20845.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 578

 Score =  538 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 198/584 (33%), Positives = 316/584 (54%), Gaps = 12/584 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N +I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++          F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKKTHGLELTEA-FPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++       +  +  G    A +       GN
Sbjct: 304 NDSLLIKKALDNQEEVMGICVPDAASAFSKKQLSHFYQEMKELGCSRFASLKV-----GN 358

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
              +G +A       ++ +  R + +DGD    +     +        R  +A+ L +IN
Sbjct: 359 GQLVGDLASTF-EAESQELLERFEAKDGDLILLVMAKQRRAQEALGHLRIEVAKALNLIN 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT         +G D    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFE----EGQDPAQFRSQAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSQEDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +L G +N+R+V  FP +    D +M SPS V   QL+EL L + 
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMMESPSLVDQRQLKELHLELK 577


>gi|332758054|gb|EGJ88380.1| aspartyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332766842|gb|EGJ97043.1| aspartyl-tRNA synthetase [Shigella flexneri 2930-71]
          Length = 504

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 186/508 (36%), Positives = 278/508 (54%), Gaps = 6/508 (1%)

Query: 89  IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRI 148
           + TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR  + + +  R +I
Sbjct: 1   MATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKI 58

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM S
Sbjct: 59  TSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMS 118

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R ++ E    +
Sbjct: 119 GFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVD 177

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
               +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   +   G     
Sbjct: 178 --LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRVAAL 235

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIR 388
               G    R   D    + +  G  GLAYI       G      PVAK LN    EAI 
Sbjct: 236 RVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAIL 295

Query: 389 VRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE 448
            R   QDGD  FF A +              + ++LG+ + + +   W++DFP +E ++ 
Sbjct: 296 DRTAAQDGDMIFFGADNKKIVADGMGALLLKVGKDLGLTDESKWAPLWVIDFPMFE-DDG 354

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H  ++    F
Sbjct: 355 EGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVF 414

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +   
Sbjct: 415 GILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAA 474

Query: 569 CDLLMGSPSTVSVEQLRELGLRIVENPK 596
             L+  +PS  +   L EL +++V+  +
Sbjct: 475 ACLMTEAPSFANPTALAELSIQVVKKAE 502


>gi|303279314|ref|XP_003058950.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460110|gb|EEH57405.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 679

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 221/601 (36%), Positives = 330/601 (54%), Gaps = 22/601 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           R+H+ GDL  +DVG  V L GWV + R  GGI+F D+RDH G+ QVV++ D  S      
Sbjct: 65  RSHAAGDLRDADVGDVVTLCGWVDKQRDMGGIVFADVRDHTGLCQVVSDADTPSRAVAAL 124

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
            ++R+EWV+ + G V +R+A   N  I TG +E++A ++++L+    +    +   GE +
Sbjct: 125 AAMRAEWVVRVRGRVKARTAP--NDKIPTGAVEVAADEVDVLNVVGKSLPFAIGGGGEED 182

Query: 120 YP-------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTA 171
                    E +R K R LDLRR  + KN+  R + + ++R  +     F+E  TP+LT 
Sbjct: 183 DDAAGGGASEEVRLKNRVLDLRRPRMVKNLRLRAKTVRALRGVLEDDHGFLEIETPMLTR 242

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           S+PEGARD+LVPSR+  G+ YALPQ+PQ +KQ+LM +G DRY+Q+A CFRDED R+DR P
Sbjct: 243 STPEGARDYLVPSRLQPGACYALPQSPQLFKQMLMVAGADRYYQVARCFRDEDLRADRQP 302

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF QLD+EM+F + D IL+  E+++   F+E  +   +   F R+ Y +A+ +YG+DKP
Sbjct: 303 -EFTQLDIEMAFTDMDGILSLGEDLMCAAFKEGVDVT-LPRPFPRMTYAEAMSKYGSDKP 360

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW---A 348
           D+R  +    +T+      F++FS   S N G         G   + +      +    A
Sbjct: 361 DVRYGLEFTTITDIASRCAFKLFSGAASENGGAVKAIRVPDGKRLSNSRLKPKGDVCAEA 420

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
              G  GLA+     D      G   + + L       I        GD   F AGD   
Sbjct: 421 IKGGAGGLAFARVGEDGVSLEGGGKALCEGL-ADVAGEIIDACGAGAGDVVLFGAGDESV 479

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                   R ++A+ L +I  +     WI +FP +E NE+E +++  H+PFT P      
Sbjct: 480 VNKSLDRVRQYVAKTLDMIPDDAHAVLWITEFPMFEKNEDEDRLEALHHPFTAPNQDDV- 538

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
             G D+   +A  YDLV NG E+  G +R +  +V  + F  +G+SKE  E +FG L  A
Sbjct: 539 RDGGDITKARAVAYDLVYNGVEVGGGSLRIYRRDVQEKVFDAIGLSKEEAEEKFGYLMDA 598

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
           FQ G PPHGG+A G+DR+VM+L GA ++R+V  FP +     LL  +P +VS  QL +L 
Sbjct: 599 FQFGAPPHGGMAFGLDRLVMMLAGASSIRDVIAFPKTATAQCLLTSAPGSVSDAQLADLH 658

Query: 589 L 589
           +
Sbjct: 659 V 659


>gi|323353267|ref|ZP_08087800.1| aspartate--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322121213|gb|EFX92976.1| aspartate--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 578

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 198/584 (33%), Positives = 316/584 (54%), Gaps = 12/584 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N +I +GQ+EL A+KIEI++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEIIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++        + F  I Y++A+ R+G+DKPD R  + + N+T+    
Sbjct: 245 IRALVEAMLKAVVKKTHGLELTED-FPTISYEEAMSRFGSDKPDTRFGLELKNLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          IP      ++       +  +  G    A +       GN
Sbjct: 304 NDSLLIKKALDNQEEVMGICIPDAASAFSKKQLSHYYQEMKEFGCSRFASLKV-----GN 358

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
              +G +A       ++ +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 359 GQLVGDLASTF-EAESQELLERFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT          G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFED----GQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L + 
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLELK 577


>gi|317470964|ref|ZP_07930343.1| aspartyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316901615|gb|EFV23550.1| aspartyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 589

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 259/594 (43%), Positives = 361/594 (60%), Gaps = 19/594 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YR+ +   +  SD+GS ++++GWV  +R HGG+ F+D+RD YG+ QVV    S    + 
Sbjct: 12  MYRSKTMDKISESDIGSQLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVLRDAS----LL 67

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYP 121
             VR E  L I+G++  R  ET N  I TG IEL A KI +L     +LP  V G +E  
Sbjct: 68  NEVRKEECLSIEGIIEHRDEETYNPKIPTGTIELEAHKITVLGKVYTDLPFEVSGSKEIR 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLR   +  NI  R+ +I+ +R +M    F+E  TPIL ASSPEGARD++
Sbjct: 128 EDVRLKYRYLDLRNRKVKDNIKFRSEVISFLRRKMDDLGFMEIQTPILCASSPEGARDYI 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR  +G FYALPQAPQQYKQLLM SG D+Y+Q+APCFRDED R+DR PGEFYQLD EM
Sbjct: 188 VPSRKYKGKFYALPQAPQQYKQLLMVSGIDKYYQVAPCFRDEDARADRSPGEFYQLDFEM 247

Query: 242 SFVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           SF  Q+D+    E VL   F++F+          F  I Y  A+  +GTDKPDLRNP+ +
Sbjct: 248 SFATQEDVFKIGEEVLAETFKKFAPEGSVVTDTPFPVISYQQAMLEFGTDKPDLRNPLRI 307

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VT+ F    F+ F          +           ++ F +++ ++A+S G  GL Y+
Sbjct: 308 VDVTDFFQRCTFKPFHD--------KTVRAVKVHANLSKGFHEKLLKFAQSIGMAGLGYL 359

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             + D    ++  GP+ K +       +  +  ++ GD  FFIA      C FA   R+ 
Sbjct: 360 EVKED----MSYKGPIDKFIPEDMKSELAEKAHLEAGDVIFFIAASEKPACLFAGQIRDE 415

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A  L +   N + FC+I DFP YE +EE  ++ F HNPF+MPQGG+++L   D L I A
Sbjct: 416 LAARLDLCEKNAYRFCYINDFPMYETDEETGQVTFTHNPFSMPQGGLKALNEKDPLDILA 475

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG +RNH  +VM++AF   G  +E ++ +FG LY AFQ G PPH G+
Sbjct: 476 YQYDIVCNGVELSSGAVRNHDLDVMVKAFEVAGYDEETLKEKFGALYNAFQFGAPPHAGM 535

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A GIDR++MLL   +N+REV  FPMS    DL+ G+P  VS  QLRE  +++ +
Sbjct: 536 APGIDRMIMLLRNEENIREVIAFPMSGTAQDLMCGAPGEVSELQLRETHIKVRD 589


>gi|320334429|ref|YP_004171140.1| aspartyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755718|gb|ADV67475.1| aspartyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 584

 Score =  537 bits (1383), Expect = e-150,   Method: Composition-based stats.
 Identities = 224/596 (37%), Positives = 313/596 (52%), Gaps = 19/596 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             R+H CGDL     G  V L+GWV+RVR   G  F+ +RD  GI QV    D+A +E A
Sbjct: 1   MKRSHYCGDLRPEHAGQTVNLAGWVNRVRDFPGQYFVILRDRTGIVQVTVEADNAAYETA 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-EREYP 121
             +R E+V+ + G+V +R          TG +E+    + IL+ A      V G      
Sbjct: 61  GELRGEYVVEVTGVVRARGEAQRTDAYATGGVEVIPTTLRILNRATTPAFQVDGSPVTVG 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E IR KYR+LDLRR  +   +  R+R+   +   + +E F+   TP+LT S+PEGARDFL
Sbjct: 121 EDIRLKYRYLDLRRREMQDVLRLRSRVQAEVTRFLDSEGFVNVETPMLTRSTPEGARDFL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR+N G FYALPQ+PQ +KQLLM +G DRY+Q A CFRDED R+DR P +F QLDMEM
Sbjct: 181 VPSRLNPGEFYALPQSPQLFKQLLMIAGLDRYYQFARCFRDEDLRADRQP-DFTQLDMEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVEQDD+L+  E +LR VF E    + + N F RI Y +A+ RYG+DKPDLR      +
Sbjct: 240 SFVEQDDVLDLNERLLRHVFREVLGED-LPNPFPRISYFEAMDRYGSDKPDLRFGQAFTD 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           VT  F    F+ F+   +V                 R   D +   A+  G  GLA++  
Sbjct: 299 VTGLFQGGAFKAFADAQTVKVLV--------APELTRKQIDELERVAKQNGARGLAWLKR 350

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
             D        G ++K +    +  +     ++ G +  F AGD     +     RN + 
Sbjct: 351 DGDA-----FTGGISKFVG-EVSAQLIDATGVEQGGTLLFAAGDWRAAVTALGAVRNALR 404

Query: 422 QELGIINCN-CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND-LLSIKA 479
               +      F   W+ DFP  + + E  +  + H+PFT P     +L G      I+A
Sbjct: 405 DLFDLAAHGPRFHIGWVTDFPQLDQDPETGEWTYMHHPFTAPHPDDVALFGTPRQGEIRA 464

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NGFE+  G +R H   V  Q F  +G ++     +FG    A   G PPHGGI
Sbjct: 465 QAYDLVLNGFEVGGGSVRIHDPAVQTQMFGAIGFTEVQAREKFGFFMDALASGTPPHGGI 524

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           A G DR++ML+ GA N+REV  FP +    DL+  +P+ V   QL ++G+++    
Sbjct: 525 AWGFDRLIMLMSGASNIREVIAFPKNNRGADLMADAPAPVDAAQLADVGVQVKIPE 580


>gi|21672582|ref|NP_660649.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|3915068|sp|P81432|SYD_BUCAP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2947034|gb|AAC05432.1| aspartyl-tRNA synthetase [Buchnera aphidicola]
 gi|21623211|gb|AAM67860.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 584

 Score =  536 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 206/591 (34%), Positives = 328/591 (55%), Gaps = 9/591 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           RT  CG++ + D+   V L GWVH++R     IF+D+RD  GI Q+V    ++  F  A 
Sbjct: 2   RTKYCGNIRIIDLHKSVILCGWVHKIRNFSQFIFIDMRDWTGIVQLVFEKKNNKVFTKAV 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++++E  + + G+V  R+A   N N+ TG+IE+   KI++ ++++   LP+       + 
Sbjct: 62  NLKNESCIQVIGIVKKRNA--NNNNLDTGEIEILVNKIKVFNISK--NLPLDYSNNSNDD 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR KYR+LDLRR  L +N+  R +I + +R  M  +NF++  TP LT S+PEGARD+LVP
Sbjct: 118 IRLKYRYLDLRRSELLENLKIRNKITHLIRIFMENKNFLDIETPFLTKSTPEGARDYLVP 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR   G+FYALPQ+PQ +KQ+LM SG D+Y+QI  CFRDED RSDR P EF Q+D+E SF
Sbjct: 178 SRNYPGNFYALPQSPQLFKQILMISGIDKYYQIVKCFRDEDLRSDRQP-EFTQIDIEASF 236

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V    I N +E +++ ++ +  N N   N F +I + D+++RYG+DKPDLRNP+ + +++
Sbjct: 237 VSSTKIRNLVETLIKKIWLKVINYN--LNKFPKISFYDSMKRYGSDKPDLRNPMEIVDIS 294

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +  +  +   F +I              +G   ++   D  + + +  G   L YI    
Sbjct: 295 DIVIEEKVASFFQINLKKKNRIALLCFGQGNKISQKKIDEYSNYVKKFGAKKLFYIKINK 354

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E+        +   L+    E I  + + ++G+  F +A +           R  +  +
Sbjct: 355 IENRFQDIQSSIKNILDKNTLENILRKTNAKNGNILFLLADEEKIVNKSLGMLRIKLGND 414

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
                 N ++  WI+DFP ++ N +  K    H+PFT  +   ++    +     +  YD
Sbjct: 415 FIFFKKNTWKPVWIVDFPMFKQNSD-GKFSSNHHPFTALKKNNQNKLEKNPNLAISDSYD 473

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG+EI  G +R H +++  + F+ +GI K+    +FG L  A + G PPH GIA G+
Sbjct: 474 LVINGYEIGGGSVRIHDAKIQKKVFNIIGIEKQFQREKFGFLIEALKYGPPPHAGIALGL 533

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           DRIVMLL    N+R+V  FP + +   L+  SPS +    L ELG+ I++ 
Sbjct: 534 DRIVMLLTNTNNIRDVIAFPKTTSANCLMTDSPSKLKKSILNELGINILKK 584


>gi|256384356|gb|ACU78926.1| aspartate--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385188|gb|ACU79757.1| aspartate--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455509|gb|ADH21744.1| aspartate--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 574

 Score =  536 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 205/591 (34%), Positives = 331/591 (56%), Gaps = 17/591 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RTH+CG+L + ++   V L GWV ++R  G ++F+D++D YGITQ+V   ++   ++ 
Sbjct: 1   MKRTHTCGELTIDNIDQEVILQGWVKKIRKLGAMVFIDLKDRYGITQLVIEQENI--DLI 58

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +V++E+V+ I G V+ R  ++IN  ++TG IE+  +++ I++ +E  P  +  +    E
Sbjct: 59  NNVKNEYVIEIKGNVVKR--KSINKELVTGDIEVIVKELFIINKSELTPFVLENDVNVNE 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R  YR+LDLRR  +  N++ R +I + +R  +   NF+E  TP    S+PEGARDFLV
Sbjct: 117 DTRLTYRYLDLRRQVMQNNLIIRAKINHIIRNFLTDLNFLEVETPYFAKSTPEGARDFLV 176

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N+  FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R DR P EF QLD+EMS
Sbjct: 177 PSRLNKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQP-EFTQLDLEMS 235

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +D++   E++++ + +E  N        LR+ Y DAI  YG+DKPDLR  + +H +
Sbjct: 236 FATSEDVMQISESLIKKILKEVKNFEIKEPL-LRLSYKDAIDLYGSDKPDLRYDLKIHTL 294

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            + F ++  +  +     NP   + AI       ++   + +N+ A+      +A+I + 
Sbjct: 295 NDIFKNTNIKFLN-----NPDLFIRAICI-DQLLSKKQLEDLNQQAKQFSFNSIAFIKFE 348

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +        G +A  L     E +    D+++  +     G   +        R  +A+
Sbjct: 349 DNN-----WSGSLASQLTENEKELLIKEFDIKNKATIILNIGKYAEISQLMGAIRISLAK 403

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              +   + F+  W++DFP +E++E+E +   AH+PFT P+    +    +     A  Y
Sbjct: 404 MFNLETKDDFKLLWVVDFPLFEFSEQENRYVAAHHPFTSPKEECLTDFDTNKKDALACAY 463

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NGFEI  G  R    E+  + F  V ++ + VE  FG    A++ G P H GIA G
Sbjct: 464 DLVMNGFEIGGGSQRITNPEIQQRMFDAVELTAKQVETNFGWFMNAYKYGAPYHAGIAWG 523

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DRI M+L  + ++R+V  FP +    D++  +P  VS +QL EL ++IV+
Sbjct: 524 LDRISMILTDSNSIRDVIAFPKNSLGIDMMSNAPDLVSEKQLEELNIKIVK 574


>gi|116620658|ref|YP_822814.1| aspartyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|116223820|gb|ABJ82529.1| aspartyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 591

 Score =  535 bits (1379), Expect = e-150,   Method: Composition-based stats.
 Identities = 224/604 (37%), Positives = 330/604 (54%), Gaps = 42/604 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIA 62
           RTH CG+L  S+ G  V L GW HR R HG +IF+D+RD  G TQ +   + D A  + A
Sbjct: 15  RTHMCGELRASNAGQKVLLMGWAHRRRDHGAVIFVDMRDRTGHTQAIFHEDVDPAIHKRA 74

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + VR+E+V+ ++G+V  RSA T+N N+ TG++E+ A KI IL+ +   P P+    +  E
Sbjct: 75  EEVRAEYVIAVEGVVSLRSAATVNPNMPTGEVEVVASKIWILNESRTPPFPMEEHVDVAE 134

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR++DLRR  + +N++ R++I  ++R  + +E F+E  TP +T S+PEGARD+LV
Sbjct: 135 DVRLKYRYVDLRRPQMQRNVIMRSQISFAVREFLYSEGFLEIETPFMTRSTPEGARDYLV 194

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G+FYALPQ+PQ +KQLLM SGF++YFQI  CFRDED R+DR P EF Q+D+EMS
Sbjct: 195 PSRVQPGTFYALPQSPQIFKQLLMISGFEKYFQIVRCFRDEDLRADRQP-EFTQIDLEMS 253

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +Q  I   +E +++ V +  +  +  +  F RI Y +A+R YG DKPD R P  MH V
Sbjct: 254 FPQQAQIFAVIEPLIQKVCK-VAGFDVPAT-FPRITYAEAMRNYGIDKPDTRIP-PMHPV 310

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +           ++ ++        IPA G   +R   D      + +G          
Sbjct: 311 GDLMP--------ELANLGLPLVAIHIPACGT-PSRKERDEFKAVGQEKG-------LRV 354

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF---------IAGDPLKFCSFA 413
            D+   +    P            +R R   ++               +           
Sbjct: 355 YDDPKRLERDYP-------EQMAKVRERCGAKEDSLLVLATWGGAEAPVRRPEETVYQAC 407

Query: 414 ADARNHIAQELG----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
              R  +A +      +++   F+F W++DFP +EWNEE+ +   AH+PFT        L
Sbjct: 408 GQLRLVLASKFNDRHKLLDPKNFQFLWVVDFPMFEWNEEDNRWVAAHHPFTSVHDEDIDL 467

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              D    +A  YDLV NG E+ SG IR H  +V  + F+ VG S +    RFG L  A 
Sbjct: 468 LTADPAKCRAKSYDLVLNGVELGSGSIRIHRRDVQAKVFAAVGFSDDEARRRFGYLLEAL 527

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGGIA G+DR+VM+L G  ++REV  FP +    DL+  +P+ V    L+ELG+
Sbjct: 528 EYGAPPHGGIALGLDRLVMILAGETSIREVIPFPKTARGTDLMSDAPAPVPDRALKELGI 587

Query: 590 RIVE 593
            + +
Sbjct: 588 ALRK 591


>gi|159473653|ref|XP_001694948.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii]
 gi|158276327|gb|EDP02100.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii]
          Length = 714

 Score =  535 bits (1379), Expect = e-150,   Method: Composition-based stats.
 Identities = 209/620 (33%), Positives = 330/620 (53%), Gaps = 33/620 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+H CG +  +D+GS V + GWV R R  GG+ F D+RDH G+ QV+  P S   E+   
Sbjct: 100 RSHGCGAVTTADIGSKVTICGWVDRNRDMGGVQFFDVRDHSGLLQVICEPQSVAPEVSRT 159

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV---AEELPLPVFGER 118
           A  +R+E+V+C+ G++ +R  +  N  I TGQ+E+ A+ ++IL+V   +   P+    E+
Sbjct: 160 ASRLRNEYVVCVKGVLRAR--KDPNPKIPTGQLEVLAESVDILNVVTRSLPFPISEAEEQ 217

Query: 119 EYP-ESIRFKYRF-LDLR------------------RDTLHKNIVKRTRIINSMRCRMIA 158
           E P E  R K R  LD                    R  +  N+  R +++  +R  +  
Sbjct: 218 EPPKEDTRLKNRPSLDPHLPAPDPDPTSLPTPSSPSRPKMAANLRLRHKLLRLIRTFLED 277

Query: 159 EN-FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
            + F+E  TPILT S+PEGARD+LVPSRV  G +YALPQ+PQ +KQ+LM +G DRY+QIA
Sbjct: 278 RHGFMEVETPILTRSTPEGARDYLVPSRVQPGEWYALPQSPQLFKQMLMVAGMDRYYQIA 337

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
            CFRDED R+DR P EF QLD+E+SF++   + + ME ++  VF++      ++  F RI
Sbjct: 338 RCFRDEDLRADRQP-EFTQLDIEVSFMDDKALQSLMEELVLQVFDQILGVT-LAAPFRRI 395

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y +A+ +YG+DKPDLR  +   +V+       F+VF+  ++     +   +P      N
Sbjct: 396 SYAEAMDKYGSDKPDLRYGLEFVDVSPAVAGCGFKVFAGAVADGGVVKAIRVPDGKRISN 455

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
                + +    +           R+   G++     + + L+      +      Q GD
Sbjct: 456 TRIKPKGDIANEAVAAGAAGLASIRVAADGSLDAAKAIKEGLSPEQAAQLMAATGAQPGD 515

Query: 398 SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN 457
                AG            R  + ++LG+I        W++DFP +E+N EE +    H+
Sbjct: 516 LLLLAAGPRDTVHRALDRVRQLLGRDLGLIKPGDHSLLWVVDFPMFEFNPEEGRYQAIHH 575

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           PFT P+    +    D ++ +A  YDLV NG EI  G +R +  ++  + F  +G++   
Sbjct: 576 PFTAPRPDDWA--SGDYVNARALAYDLVYNGVEIGGGSLRIYRRDIQQKVFELIGLTPAE 633

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
            +++FG L   F+ G PPHGG+A G+DR+ MLL GA ++R+V  FP +      L G+P+
Sbjct: 634 AQSKFGYLLDCFEYGAPPHGGLAFGLDRLAMLLAGAPSIRDVIAFPKTTQAQCALTGAPA 693

Query: 578 TVSVEQLRELGLRIVENPKK 597
            V+ +QL EL +     PK+
Sbjct: 694 AVADKQLVELSIASTAPPKQ 713


>gi|42560880|ref|NP_975331.1| aspartyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|62287569|sp|Q6MTR3|SYD_MYCMS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|42492377|emb|CAE76973.1| aspartate-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320537|gb|ADK69180.1| aspartate--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 574

 Score =  535 bits (1378), Expect = e-150,   Method: Composition-based stats.
 Identities = 203/591 (34%), Positives = 330/591 (55%), Gaps = 17/591 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RTH+CG+L ++++   V L GWV ++R  G ++F+D++D YGITQ+V +      ++ 
Sbjct: 1   MKRTHTCGELTINNIDQEVILQGWVKKIRKLGAMVFIDLKDRYGITQLVVDQQHI--DLI 58

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +V++E+V+ I G V+ R  ++IN  ++TG IE+  +++ I++ +E  P  +  +    E
Sbjct: 59  NNVKNEYVIEIKGNVVKR--KSINKELVTGDIEVIVKELFIINKSELTPFVLENDVNVNE 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R  YR+LDLRR  +  N++ R +I + +R  +   NF+E  TP    S+PEGARDFLV
Sbjct: 117 DTRLTYRYLDLRRPVMQNNLIIRAKINHIIRNFLTDSNFLEVETPYFAKSTPEGARDFLV 176

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N+  FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R DR P EF QLD+EMS
Sbjct: 177 PSRLNKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQP-EFTQLDLEMS 235

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +D++   E++++ + +E  N        LR+ Y DAI  YG+DKPDLR  + +H +
Sbjct: 236 FATSEDVMQISESLIKKILKEVKNFEIKEPL-LRLSYKDAIDLYGSDKPDLRYDLKIHTL 294

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            + F ++  +  +     NP   + AI       ++   + +N+ A+      +A+I + 
Sbjct: 295 NDIFKNTNIKFLN-----NPDLFIRAICI-DQLLSKKQLEDLNQQAKQFHFNSIAFIKFE 348

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +        G +A  L     E +    D+++  +     G   +        R  +A+
Sbjct: 349 NNN-----WSGSLASQLTENEKELLIKEFDIKNKATIVLNIGKYEQISQLMGAIRISLAK 403

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              +   + F+  W++DFP +E++E+E +   AH+PFT P+    +    +        Y
Sbjct: 404 MFNLETKDDFKLLWVVDFPLFEFSEQENRYVAAHHPFTSPKEECLTDFDTNKKDALTCAY 463

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NGFEI  G  R    E+  + F  V ++ + VE  FG    A++ G P H GIA G
Sbjct: 464 DLVMNGFEIGGGSQRITNPEIQQRMFDAVELTTQQVETNFGWFMNAYKYGAPYHAGIAWG 523

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DRI M++  + ++R+V  FP +    D++  +P  VS +QL EL ++IV+
Sbjct: 524 LDRISMIVTDSNSIRDVIAFPKNSLGIDMMSNAPDLVSEKQLEELNIKIVK 574


>gi|51598701|ref|YP_072889.1| aspartyl-tRNA synthetase [Borrelia garinii PBi]
 gi|62287544|sp|Q661H4|SYD_BORGA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|51573272|gb|AAU07297.1| aspartyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 586

 Score =  535 bits (1378), Expect = e-150,   Method: Composition-based stats.
 Identities = 221/591 (37%), Positives = 337/591 (57%), Gaps = 10/591 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+   +    +IA
Sbjct: 1   MFKVIKCNELNEKLINKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLIT-EEHLLKIA 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++ E+ + I GL+  R    IN N+ TG  E+ A+ IEI+S   ELP  +  +    E
Sbjct: 60  EKIKLEYCIKIQGLLSKRPPNMINENMKTGSFEILAKNIEIISKCNELPFMIEDDNNASE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + KYR+LDLRRD+L   I+ R +  + +R  ++ + F+E  TP    S+PEGARDF++
Sbjct: 120 NSKLKYRYLDLRRDSLKNKIILRCQATHLIRNFLVKKKFLELETPTFVKSTPEGARDFVI 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++++I   +EN+L  +F+   N   +   F +I Y  A+ +YG+DKPD R  + + ++
Sbjct: 239 FVKKENIFKLIENMLFLIFKNCLNIK-LPKKFKKITYKTAMNKYGSDKPDTRFELTLQDI 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           + +  +SEF VF + L      ++  +  +    +RA  + + E A+     GL +    
Sbjct: 298 SRNLKNSEFNVFKETLKNKGSIKILIVKDEADKFSRAKINNLEEIAKLYKTQGLYFAKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-IAGDPLKFCSFAADARNHIA 421
                N    G +AK L     + I+    +++ D  FF         C      R  IA
Sbjct: 358 -----NNKFSGGIAKFLKTEEQQLIKT-YSLENNDIIFFTANKKWETACKAMGQIRIKIA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+    +             
Sbjct: 412 NDLGLIDENKFEFLWVYDFPLFEYDENTKTYTPAHHMFSLPKKRYIASLEKIPNKTIGEI 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFATSPLDDSPSKISNEQLKELGINIV 582


>gi|324993494|gb|EGC25414.1| aspartate--tRNA ligase [Streptococcus sanguinis SK405]
          Length = 578

 Score =  535 bits (1378), Expect = e-150,   Method: Composition-based stats.
 Identities = 200/584 (34%), Positives = 315/584 (53%), Gaps = 12/584 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N +I +GQ+EL A+KIEI++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEIIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++        + F  I Y++A+ R+G+DKPD R  + + N+T+    
Sbjct: 245 IRALVEAMLKAVVKKTHGLELTED-FPTISYEEAMSRFGSDKPDTRFGLELKNLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          IP      ++       +  +  G    A +       GN
Sbjct: 304 NDSLLIKKALDNQEEVMGICIPDAASAFSKKQLSHYYQEMKEFGCSRFASLKV-----GN 358

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
              +G +A       ++ +  R + +DGD    +     +        R  +A+ L +IN
Sbjct: 359 GQLVGDLASTF-EAESQELLERFEAKDGDLILLVMAKQRRAQEALGHLRIEVAKALNLIN 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT          G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFED----GQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHNRKAQEAMFELLGMSWEDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +L G +N+R+V  FP +    D +M SPS V   QL+EL L + 
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMMESPSLVDQRQLKELHLELK 577


>gi|238916390|ref|YP_002929907.1| aspartyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238871750|gb|ACR71460.1| aspartyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 581

 Score =  535 bits (1378), Expect = e-150,   Method: Composition-based stats.
 Identities = 254/595 (42%), Positives = 365/595 (61%), Gaps = 19/595 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + YR  +  ++  S +G  ++++GWV  +R HGG+ F+D+RD YG+ QVV    +    I
Sbjct: 3   NMYRDVNLSEVNESYIGKELKVAGWVENIRDHGGVSFIDLRDMYGVLQVVLRDTTLLDGI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREY 120
            K       + I+G++  R  ET N  I +G IEL A+KI IL  V ++LP  V   +E 
Sbjct: 63  HKE----ECIAIEGIMEQRDEETYNPKIPSGTIELEAKKITILGQVYQQLPFEVQTSKEV 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLR   +  N++ R+++I  +R +M    F+E  TPIL ASSPEGARD+
Sbjct: 119 REDVRLKYRYLDLRNQKVKDNMIFRSKVIAFLRQKMTDMGFLEIQTPILCASSPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR  +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 179 IVPSRKYKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSF  Q+D+    E VL   F +F+          +  I Y  A+  +G+DKPDLRNP+ 
Sbjct: 239 MSFATQEDVFRIGEEVLTETFAKFAPEGYEVTQAPYPIISYKQAMLEFGSDKPDLRNPLR 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + +++E F    F+ F      N       + AK    ++   +++ ++A   G  GL Y
Sbjct: 299 IIDLSEFFNKCTFKPFQ-----NKTVRAINVHAK---LSKGQHEKLLKFATGIGMGGLGY 350

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +    D     +  GP+ K +       I+    +Q GD+ FFIA    +   FA   RN
Sbjct: 351 LEVLEDG----SYKGPIDKFIPEELKGEIKDLAGLQPGDTIFFIADKEDRAAYFAGQIRN 406

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + + L +I  N + FC++ DFP +E + E KKI F HNPF+MPQGG+E+L   D L I 
Sbjct: 407 ELGERLDLIEKNAYRFCYVNDFPMFERDPETKKIGFTHNPFSMPQGGLEALNTKDPLDIL 466

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG +RNH  ++M++AF   G  +EV++ +FG LY AFQ G PPH G
Sbjct: 467 AYQYDIVCNGVELSSGAVRNHDMQIMVKAFEIAGYDEEVLKAKFGALYNAFQFGAPPHAG 526

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +A G+DR++MLL   +N+RE+  FPMS    DL+ G+P+ V+ +QLRE+ +++ +
Sbjct: 527 MAPGVDRMIMLLRNEENIREIIPFPMSGTAQDLMCGAPNEVTEQQLREVHIKVRD 581


>gi|332360523|gb|EGJ38333.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 578

 Score =  535 bits (1377), Expect = e-149,   Method: Composition-based stats.
 Identities = 196/584 (33%), Positives = 316/584 (54%), Gaps = 12/584 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    D   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGDIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G V+ R    +N +I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DIIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++          F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKKTHGLELTEA-FPAISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           +E  +  K L          +P      ++       +  +  G    A +     E+G 
Sbjct: 304 NESLLIKKALDNQEEVMGICVPDAASAFSKKQLSHYYQEMKEFGCSRFASLKV---ENGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +G +A       ++ +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 L--VGDLASTF-EAESQELLTRFEAKDGDLILLVMAKKRRAQEALGHLRLEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT          G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFED----GQEPGQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +GI +E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGIGREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L + 
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLELK 577


>gi|219684410|ref|ZP_03539354.1| aspartyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219672399|gb|EED29452.1| aspartyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 586

 Score =  535 bits (1377), Expect = e-149,   Method: Composition-based stats.
 Identities = 223/591 (37%), Positives = 337/591 (57%), Gaps = 10/591 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+   +    +IA
Sbjct: 1   MFKVIKCNELNEKLINKKVEINAWVKKIRHHGKFIFLNIRDRYEQAQVLIT-EEHLLKIA 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++ E+ + I GL+  R    IN N+ TG  E+ A+ IEI+S   ELP  +  +    E
Sbjct: 60  EKIKLEYCIKIQGLLSKRPPNMINENMKTGSFEILAKNIEIISKCNELPFMIEDDNNASE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + +YR+LDLRRD+L   I+ R +  + +R  ++ +NF+E  TP    S+PEGARDF++
Sbjct: 120 NSKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLVKKNFLELETPTFVKSTPEGARDFVI 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++GSFYALPQ+PQ YKQLLM +GFD+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGSFYALPQSPQLYKQLLMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++++I   +EN+L  +F+   N   +   F +I Y  A+ +YG+DKPD R  + + ++
Sbjct: 239 FVKKENIFKLIENMLFLIFKNCLNIK-LPKKFKKIAYKTAMNKYGSDKPDTRFELTLQDI 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           + +  +SEF VF   L      ++  +  K    +RA  + + E A+     GL +    
Sbjct: 298 SRNLKNSEFNVFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLYFTKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-IAGDPLKFCSFAADARNHIA 421
                N    G +AK L     + I+    +++ D  FF         C      R  IA
Sbjct: 358 -----NNKFSGGIAKFLKTEEQQLIKN-YSLENNDIIFFTANKKWEAACKAMGQIRIKIA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+    +             
Sbjct: 412 NDLGLIDENKFEFLWVYDFPLFEYDENTKTYTPAHHIFSLPKKRYIASLEKTPNKTLGEI 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSLAASPLDDSPSKISDEQLKELGINIV 582


>gi|218295028|ref|ZP_03495864.1| aspartyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244231|gb|EED10756.1| aspartyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 581

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 239/596 (40%), Positives = 333/596 (55%), Gaps = 24/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L     G  V L GWV+R R  GG+IF+D+RD  G+ Q+VA+P S  + +A+ 
Sbjct: 3   RTHYAGSLREEHAGQEVVLEGWVNRRRDLGGLIFIDLRDREGVVQLVAHPQSPAYAVAER 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG------ER 118
           VRSEWV+   GLV  R     N  + TG +E+    +E+L+ A+  P PV        E+
Sbjct: 63  VRSEWVVRAKGLVRLRPEP--NPRLATGAVEVELTSLEVLAEAKTPPFPVDAGWRGEEEK 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E  E +R KYR+LDLRR  + +N+  R R+I ++   +  E FI+  TP LT S+PEGAR
Sbjct: 121 EAGEELRLKYRYLDLRRRRMQENLRLRHRVIKAIWDYLDREGFIQVETPFLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP R   G FYALPQ+PQ +KQ+LM +GFDRYFQIA CFRDED R+DR P +F Q+D
Sbjct: 181 DFLVPYRQEPGLFYALPQSPQLFKQMLMVAGFDRYFQIARCFRDEDLRADRQP-DFTQMD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE +DIL   E ++  VF E      +   F R+ Y++A+ R+G+DKPDLR  + 
Sbjct: 240 LEMSFVEVEDILTLNEGLMAHVFREALGVE-LPLPFPRLSYEEAMERFGSDKPDLRFGLE 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +  V   F  S F +F +   V                +R     + E A+ +G  GLA+
Sbjct: 299 LKEVGPLFRESPFDLFRQAERVKALRV-------PKALSRKEIAFLEEEAKRRGAGGLAW 351

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
              R++E G     G VAK+L      A+    + Q GD+  F AG            R 
Sbjct: 352 A--RVEEGG---FAGGVAKYLEP-VRGALLQITEAQPGDTLLFAAGPFKVAAEAMGAVRL 405

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
               +L  +    F F W++DFP  EW+ E     + H+PFT P      L  +D   ++
Sbjct: 406 L-LADLLALKREGFRFLWVVDFPLLEWDGERGGWTYMHHPFTSPHPEDLPLLESDPGRVR 464

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YDLV NG E+  G IR H   +  + F+ +GI +E  + +FG    A   G PPHGG
Sbjct: 465 ALAYDLVLNGVEVGGGSIRIHDPLLQAKVFALLGIGEEEQKEKFGFFLEALAYGAPPHGG 524

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA G+DR++ ++ G+ ++REV  FP ++   D L G+PS VS EQLRELGL +  +
Sbjct: 525 IAWGLDRLLAMMTGSPSIREVIAFPKNKEGKDPLTGAPSPVSEEQLRELGLMVSRH 580


>gi|326201553|ref|ZP_08191424.1| aspartyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325988153|gb|EGD48978.1| aspartyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 582

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 253/592 (42%), Positives = 363/592 (61%), Gaps = 19/592 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR  +   +  SDVG  ++++GWV  +R HGG+ F+D+RD YG+ QVV        E+  
Sbjct: 7   YRNRTMDKISESDVGWGLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVMRDK----ELLA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
            +  E  +C++G +  R  ET N  I TG IE+ AQ +E+L    ++LP  +   +E  E
Sbjct: 63  GINKEDCICVEGKIEIRDEETYNPKIPTGTIEMEAQSVEVLGKVYKQLPFEIMTSKEIRE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  NI+ R+ +I+ +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 123 DLRLKYRYLDLRNKKVKDNIIFRSEVISFLRQKMTDMGFLEIQTPILCASSPEGARDYIV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 183 PSRKYKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 242

Query: 243 FVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+  T E VL   F++F+          +  ICY  A+  +GTDKPDLRNP+ + 
Sbjct: 243 FATQEDVFRTGEEVLTAAFKKFAPEGSFVTEAPYPIICYKQAMLEFGTDKPDLRNPLRIV 302

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT+ F    F+ F      N       +       ++ F +++ E+A S G  GL Y+ 
Sbjct: 303 DVTDFFQRCTFKPFH-----NKTVRAIKVH---AEMSKGFHEKLLEFAVSIGMGGLGYLE 354

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D    +   GP+ K +       I     +  GD+ FFIA    +    A   R  +
Sbjct: 355 VNDD----MTYKGPIDKFIPDDMKGEIAQIAGLNQGDTIFFIADTEDRAALLAGQIRTEL 410

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
              L I   N + FC++ DFP +E+++EE+KI F HNPF+MPQGG+E+L   + L I A+
Sbjct: 411 GNRLDICEKNAYRFCFVNDFPMFEYDKEEEKIIFTHNPFSMPQGGLEALNSKNPLEILAY 470

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G ++E ++ +FG LY AFQ G PPH G+A
Sbjct: 471 QYDIVCNGIELSSGAVRNHNLDIMVRAFEIAGYTEEDLQQKFGALYNAFQYGAPPHAGMA 530

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR++MLL   +N+REV  FP++ N  D++  +P+ V+ +QLRE+ ++I 
Sbjct: 531 PGVDRMIMLLRNEENIREVIPFPLNGNAQDMMCCAPNEVTEKQLREVHIKIR 582


>gi|162456552|ref|YP_001618919.1| aspartyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
 gi|161167134|emb|CAN98439.1| aspS [Sorangium cellulosum 'So ce 56']
          Length = 649

 Score =  533 bits (1374), Expect = e-149,   Method: Composition-based stats.
 Identities = 221/636 (34%), Positives = 323/636 (50%), Gaps = 49/636 (7%)

Query: 1   MHRY-----RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           M R+     RTH CGDL  +D+G  V L GWV R R HGG IF+D+RD  G+TQ+V +  
Sbjct: 1   MSRFIDELKRTHRCGDLREADIGKEVVLFGWVARRRDHGGCIFIDLRDRTGVTQIVFDRS 60

Query: 56  S-----------------ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSA 98
                                  A+  RSEWV+ + G+V+SR    +N  I TG IE+  
Sbjct: 61  YLEAIKKHGLKVEEKDLVDAHAAAERARSEWVIGVRGVVVSREG-NVNDKIDTGAIEVWV 119

Query: 99  QKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA 158
            +  I + AE  P  +  E E  E IR ++R+LDLRR  L + +  R  I  + R  +  
Sbjct: 120 AEATIFNRAETPPFEIADEIETREEIRLQHRYLDLRRAPLQRALRMRHEINRATRNYLSD 179

Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
           +  +E  TP L   +P GAR+FLVPSR++ G FYAL ++PQ YKQL M +GFDRYFQI  
Sbjct: 180 KGCLELETPFLVKYTPGGARNFLVPSRISAGKFYALAESPQLYKQLFMVAGFDRYFQIVK 239

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN----TVSNNF 274
           CFRDED R DR P EF Q+D+E+SFV QDD+   ME ++  VF+     +      +  F
Sbjct: 240 CFRDEDLRIDRQP-EFTQIDVELSFVNQDDVFGLMEGLVFAVFKAALGKDLTELYPTGRF 298

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTE---HFVHSEFRVFSKILSVNPGYEVW---- 327
            R+ Y +++RR+G DKPDLR  I   ++T+            + ++       ++     
Sbjct: 299 PRMPYAESMRRFGNDKPDLRFGIEHTDLTDLIVEHNGGGVPFWVELAEKFKSGKLRRDLP 358

Query: 328 ------AIPAKGGGGNRAFCDRMNEWARS-QGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
                  +       +R   + +    R  +G  GLA      D S       P+ K + 
Sbjct: 359 AEIVKGLVIPASANLSRQQTEDLERGLRDVKGFRGLARAKLAEDGSWT---QSPLTKSIT 415

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC----NCFEFCW 436
               + +   L  + GD   F  G      +  A  R  +A+++G+I      + + F W
Sbjct: 416 PELRQKLNEALGAKPGDVLCFQFGKEAVVHTVMAKLRIDVAKKMGLIPEYGHGDQWRFLW 475

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           + + P +E++EE  +   AH+ FT P     +L  +D   ++ ++YDLV NGFEI  G I
Sbjct: 476 VTNPPLFEFDEETGRWAAAHHAFTRPIDEHVALLESDPARVECYRYDLVLNGFEIGGGSI 535

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  EV  + F  +GI +    ++FG L  A + G PPHGGIA G+DR+ MLL GA  +
Sbjct: 536 RLHDPEVQARVFKTLGIDENDARDKFGFLLDALRSGAPPHGGIALGMDRLAMLLSGAPTL 595

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           R+V  FP +    D + G+P  V   QL EL ++  
Sbjct: 596 RDVIPFPKTNQGTDQMTGAPVLVDAAQLAELHVKTA 631


>gi|262282065|ref|ZP_06059834.1| aspartyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262262519|gb|EEY81216.1| aspartyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 578

 Score =  533 bits (1374), Expect = e-149,   Method: Composition-based stats.
 Identities = 194/585 (33%), Positives = 318/585 (54%), Gaps = 12/585 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +   GWV  +R HG + F+++RD  G+ QV  + +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTAQGWVANIRNHGKLAFIELRDREGLLQVFVSGEIEDFAKLEEIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G V+ R    +N  I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DLIAVTGQVVQREERFVNKAIKSGQVELRAEKIEVIASSKTLPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSR+ +
Sbjct: 126 RYLDLRREKMTHNLKVRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRIYK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++          F  I Y++A+ R+G+DKPD R  + + N+T+    
Sbjct: 245 IRALVEAMLKSVVKKTHGLELTEA-FPTISYEEAMSRFGSDKPDTRFGLELKNLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           +E  +  K L          +P      ++       +  +  G    A +     E+G 
Sbjct: 304 NESLLIKKALDNQEEVMGICVPGAASAFSKKQLSHYYQEMKEFGCSRFASLKV---ENGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +G +A       ++ +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 L--VGDLASTF-EAESQELLTRFEAKDGDLILLVMAKKRRAREALGHLRLEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT         +G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFE----EGQEPGQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +L G +N+R+V  FP +    D ++ SPS V   Q++EL L + +
Sbjct: 534 ILAGEQNIRQVIAFPKNGTGFDPMLESPSLVDQRQVKELHLELKK 578


>gi|83319674|ref|YP_424308.1| aspartyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|90110073|sp|Q48979|SYD_MYCCT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|83283560|gb|ABC01492.1| aspartyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 575

 Score =  533 bits (1374), Expect = e-149,   Method: Composition-based stats.
 Identities = 204/591 (34%), Positives = 331/591 (56%), Gaps = 16/591 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RTH+CG+L + +V   V L GWV ++R  G ++F+D++D YGITQ+V   ++    + 
Sbjct: 1   MKRTHTCGELTLQNVDQKVILQGWVKKIRKLGAMVFIDLKDRYGITQLVIEQENIN--LI 58

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++++E+V+ I G+V+ R  +++N  +ITG+IE+  + + +++ +E  P  +  +    E
Sbjct: 59  NNLKNEYVIEISGIVVKR--KSVNKELITGEIEVIVKDLLVINKSELTPFVLENDVNVNE 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R  YR+LDLRR  +  N++ R +I + +R  +   NF+E  TP    S+PEGAR FLV
Sbjct: 117 DTRLTYRYLDLRRQVMQNNLIIRAKINHIIRNYLTDLNFLEVETPYFAKSTPEGARHFLV 176

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N+  FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R DR P EF QLD+EMS
Sbjct: 177 PSRLNKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQP-EFTQLDLEMS 235

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +D++   E++++ + +E  N        LR+ Y DAI  YG+DKPDLR  + +H +
Sbjct: 236 FATSEDVMQISESLIKKILKEVKNFEIKEPL-LRLSYKDAIDLYGSDKPDLRYELKIHTL 294

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            + F +S+ ++F     ++   +            +   + +N+ A+      +A+I   
Sbjct: 295 NDIFKNSDIKMF-----LDSQNKYIRAVCIDQLLTKKQLEELNQQAKQFHFNSIAFIKVE 349

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                N A  G +A  L  V  + +    ++Q+  +     G   +        R  +A+
Sbjct: 350 -----NNAWSGSLASQLTEVQKKQLIEEFNIQNKATIILNIGKYEEISQLMGAIRISLAK 404

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              +   + F+  W++DFP +E++E+E +   AH+PFT P+    +    +     A  Y
Sbjct: 405 MFNLETKDDFKLLWVVDFPLFEFSEQENRYVAAHHPFTSPKEESLADFDTNKKDALACAY 464

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NGFEI  G  R   SE+  + F  V ++++ VE  FG    A++ G P H GIA G
Sbjct: 465 DLVMNGFEIGGGSQRITNSEIQQRMFDAVELNQKQVEANFGWFMNAYKYGAPYHAGIAWG 524

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DRI M+L  + ++R+V  FP +    D++  +P  VS +QL EL ++ VE
Sbjct: 525 LDRISMILTDSNSIRDVIAFPKNSLGIDMMSNAPDLVSDKQLDELNIKTVE 575


>gi|302024636|ref|ZP_07249847.1| aspartyl-tRNA synthetase [Streptococcus suis 05HAS68]
          Length = 505

 Score =  533 bits (1374), Expect = e-149,   Method: Composition-based stats.
 Identities = 200/512 (39%), Positives = 297/512 (58%), Gaps = 12/512 (2%)

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E  N NI TG +EL    + +L+ A+  P  +    E  +  R +YR+LDLRR  +  
Sbjct: 2   EREQANDNIPTGAVELQVTSLTVLNTAKTTPFEIKDGIEASDDTRLRYRYLDLRRPEMLN 61

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           N   R  + +S+R  +    FI+  TP+LT S+PEGARD+LVPSRV++G FYALPQ+PQ 
Sbjct: 62  NFKLRAAVTHSIRNYLDELEFIDVETPMLTKSTPEGARDYLVPSRVSKGHFYALPQSPQI 121

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D+E SF+ + +I + +E ++  V
Sbjct: 122 TKQLLMNAGFDRYYQIVKCFRDEDLRGDRQP-EFTQVDLETSFLNEVEIQDIVEGLIAKV 180

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
            ++    + V+  F R+ YD A+  YG+DKPD R  +++ ++TE     +F+VFS+    
Sbjct: 181 LKDTKGID-VTLPFPRMAYDHAMNFYGSDKPDTRFEMLLQDLTELVKEVDFKVFSEA--- 236

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
            P  +   +       +R   D++ ++A+  G  GLA++     + G +A  GPVAK L 
Sbjct: 237 -PVVKAIVVKGAADCYSRKDIDKLTDYAKQFGAKGLAWVKV---DKGELA--GPVAKFLT 290

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
            + TE +   L ++D D   F+A +     +     RN +A+E G+I+ + F F WI+D+
Sbjct: 291 GI-TENLTASLQLEDKDLVLFVADELEVANNTLGALRNRLAKEQGLIDESKFNFLWIVDW 349

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +EW+EEE +   AH+PFT+P          DL  ++A  YD+V NG+E+  G +R + 
Sbjct: 350 PMFEWSEEEGRYMSAHHPFTLPTEETAHHLDGDLAQVRAVAYDIVLNGYELGGGSLRINQ 409

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            ++  + F  +G S E    +FG L  A   G PPHGG+A G+DR VMLL G  N+REV 
Sbjct: 410 KDMQERMFKALGFSAEDAHEQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGEDNIREVI 469

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            FP +    D +  +PSTV+  QL EL L I 
Sbjct: 470 AFPKNNKASDPMTQAPSTVASAQLEELALNIT 501


>gi|46202533|ref|ZP_00208554.1| COG0173: Aspartyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 501

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 263/504 (52%), Positives = 347/504 (68%), Gaps = 10/504 (1%)

Query: 100 KIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE 159
           +IEI S+A+ LP+ V G++EYPE +R +YRFLDLRR+ +H N++ R+R+I  +R  MI +
Sbjct: 3   EIEIQSIADVLPIQVAGDQEYPEDMRLRYRFLDLRREEVHANMMLRSRVIAYLRQAMIGQ 62

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
            F E  TPILTASSPEGARD+LVPSR++ G FYALPQAPQQ+KQLLM +GFD+YFQIAPC
Sbjct: 63  GFTEFQTPILTASSPEGARDYLVPSRIHPGKFYALPQAPQQFKQLLMVAGFDKYFQIAPC 122

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF-SNGNTVSNNFLRIC 278
           FRDE  R+DR PGEFYQLD EMS+V QDD+   +E VL GVF+EF          F RI 
Sbjct: 123 FRDEAGRADRSPGEFYQLDFEMSYVTQDDVFAAIEPVLEGVFKEFGKGRAVTPAPFPRIT 182

Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN- 337
           Y DA+ +YG+DKPDLRNPII+ +VTE F  S F +F+K++         AIPA G  G  
Sbjct: 183 YADAMLKYGSDKPDLRNPIIIADVTEPFRGSGFGLFAKLVDKGSVVR--AIPAPGAAGQP 240

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           R++ D++NEWAR  G  GL YI +  D        GP+AK+L     EAI+   +++DGD
Sbjct: 241 RSWFDKLNEWARENGAGGLGYIQFAAD-----GPKGPIAKNLEPARVEAIKAAANLKDGD 295

Query: 398 SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN 457
           + FF     L    FA   R  I  EL ++  + F+FCW +DFP YE NEE   ++F+HN
Sbjct: 296 AVFFACDKELPAAKFAGLVRTKIGNELDLLEKDVFKFCWTVDFPMYEINEETGLVEFSHN 355

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           PF+MPQGGM++L   D L+I A+QYD+VCNG E++SG IRNH  ++M +AF   G S   
Sbjct: 356 PFSMPQGGMDALLNQDPLTINAYQYDIVCNGVELSSGAIRNHRPDIMYKAFEIAGYSAAH 415

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
           VE  FGG+  AF+ G PPHGG A G+DRIVMLL    N+RE+ LFPM+Q   DLLM +P+
Sbjct: 416 VEEHFGGMLNAFKFGAPPHGGSAPGVDRIVMLLADQPNIREIILFPMNQQAQDLLMQAPA 475

Query: 578 TVSVEQLRELGLRI-VENPKKILK 600
            +++E+LREL +++ +  PKK +K
Sbjct: 476 EITMERLRELHIKVDLPKPKKEVK 499


>gi|50365182|ref|YP_053607.1| aspartyl-tRNA synthetase [Mesoplasma florum L1]
 gi|62287554|sp|Q6F1A0|SYD_MESFL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|50363738|gb|AAT75723.1| aspartyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 577

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 213/591 (36%), Positives = 334/591 (56%), Gaps = 14/591 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RTH+C  L +S+V   V L GW+ ++R  G I F+D+RD YGITQ+V   +    E+ 
Sbjct: 1   MKRTHNCNQLNISNVNQEVTLKGWIKKIRKMGQITFIDLRDFYGITQIVVGENKQ--ELI 58

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +++ E+V+ I G V+ R ++  NA+I TG+IE+  + IE+++ +E  P  +  + E  E
Sbjct: 59  NNLKPEYVISITGKVIERKSK--NADIPTGEIEIEVKNIELINKSELTPFVIENDVEVSE 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R  YR+LDLRR  +  N++ R ++ + +R    A+NF+E  TP    S+PEGARDFLV
Sbjct: 117 ETRMSYRYLDLRRQKIQNNMLLRAKVNSIIRKEFEADNFVEVETPYFGKSTPEGARDFLV 176

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N+ +FYALPQ+PQ YKQLLM SGFD+Y+QI  CFRDED R+DR P EF QLDMEMS
Sbjct: 177 PSRLNKNTFYALPQSPQLYKQLLMVSGFDKYYQIVRCFRDEDLRNDRQP-EFTQLDMEMS 235

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F    ++ + +E V++ +F E    +       ++ + +AI  YG+DKPD+R  + ++ +
Sbjct: 236 FASATEVQDQIEKVIKKIFLEVKGIDFKEKLI-KMPFREAIDLYGSDKPDIRFDLKINTL 294

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            E F  ++ ++F              +       ++   + + E A+ +    LA+  + 
Sbjct: 295 NEIFDKTQIKLFESFKENKLSIRGICVEEL---LSKKQLEILTETAKQKSFNNLAFAKFE 351

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                N    G +A  L+    +A+  + +++D  +     G   K        RN +A+
Sbjct: 352 -----NGTWSGSIASSLSDGEKQALIKQFNIKDKATILLNVGKYEKISDMLGAVRNKVAE 406

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L + + N ++  WI+DFP YEW++EE +   AHNPFTMP          +     A  Y
Sbjct: 407 ILNLADPNDYKLLWIIDFPLYEWSDEESRYVAAHNPFTMPNIKSIDDFETNKEDAIADSY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NGFE+ SGG+R   S +  + F  VG+  E +E  FG    A++ G P H G A G
Sbjct: 467 DLVLNGFELGSGGVRITDSGIQQRMFEAVGLDDETIEKNFGWFINAYKYGAPNHAGFAFG 526

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           IDR++MLL  ++++R+V  FP +    D++  +PS V   QL EL ++ ++
Sbjct: 527 IDRVIMLLTHSESIRDVIAFPKNSKGIDMMNDAPSYVEDNQLSELSIKTIK 577


>gi|219685156|ref|ZP_03539976.1| aspartate--tRNA ligase [Borrelia garinii Far04]
 gi|219673252|gb|EED30271.1| aspartate--tRNA ligase [Borrelia garinii Far04]
          Length = 586

 Score =  533 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 222/591 (37%), Positives = 337/591 (57%), Gaps = 10/591 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+   +    +IA
Sbjct: 1   MFKVIKCNELNEKLINKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLIT-EEHLLKIA 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++ E+ + I GL+  R    IN N+ TG  E+ A+ IEI+S   ELP  +  +    E
Sbjct: 60  EKIKLEYCIKIQGLLSKRPPNMINKNMKTGSFEILAKNIEIISKCNELPFMIEDDNNASE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + +YR+LDLRRD+L   I+ R +  + +R  ++ +NF+E  TP    S+PEGARDF++
Sbjct: 120 NSKLEYRYLDLRRDSLKNKIILRCQATHFIRNFLVKKNFLELETPTFVKSTPEGARDFVI 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++++I   +EN+L  +F+   N   +   F +I Y  A+ +YG+DKPD R  + + ++
Sbjct: 239 FVKKENIFKLIENMLFLIFKNCLNIK-LPKKFKKIAYKTAMNKYGSDKPDTRFELTLKDI 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           + +  +SEF VF   L      ++  +  K    +RA  + + E A+     GL +    
Sbjct: 298 SRNLKNSEFNVFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLYFTKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-IAGDPLKFCSFAADARNHIA 421
                N    G +AK L     + I+    +++ D  FF         C      R  IA
Sbjct: 358 -----NNKFSGGIAKFLKTEEQQLIKT-YSLENNDIIFFTANKKWESACKAMGQIRIKIA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+    +             
Sbjct: 412 NDLGLIDENKFEFLWVYDFPLFEYDENTKTYTPAHHMFSLPKKRYIASLEKTPNKTIGEI 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDDSPSKISDEQLKELGINIV 582


>gi|327473502|gb|EGF18922.1| aspartate--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 578

 Score =  533 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 195/584 (33%), Positives = 317/584 (54%), Gaps = 12/584 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N +I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++        + F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKKTHGLELTED-FPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++       +  +  G    A +     E+G 
Sbjct: 304 NDSLLIKKALDNQEEVMGICVPDAASAFSKKQLSHYYQEMKEFGCSRFASLKV---ENGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +G +A        + +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 L--VGDLASTF-EAENQELLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT          G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQSRYQAMHHPFTQGIFED----GQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKSQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L + 
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLELK 577


>gi|322386761|ref|ZP_08060385.1| aspartate--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269043|gb|EFX51979.1| aspartate--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 578

 Score =  533 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 197/584 (33%), Positives = 318/584 (54%), Gaps = 12/584 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    D   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGDIEDFARLEEIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R A  +N  I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREARFVNKAIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++          F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKKTHGLELTEA-FPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQE 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++       +  +  G   L  +     E G 
Sbjct: 304 NDSLLIKKALDSQEEVMGICVPDAASAFSKKQLSHFYQEMKEFGCSRLVSLKV---EDGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +G +A       ++ ++ R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 L--VGDLASTF-EAESQDLQARFEAKDGDLILLVMAKKRRAQEALGHLRLEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT         +G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFE----EGQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEMMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L + 
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLELK 577


>gi|313665222|ref|YP_004047093.1| aspartate--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949402|gb|ADR23998.1| aspartate--tRNA ligase [Mycoplasma leachii PG50]
          Length = 575

 Score =  533 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 203/591 (34%), Positives = 331/591 (56%), Gaps = 16/591 (2%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RTH+CG+L + +V   V L GWV ++R  G ++F+D++D YG+TQ+V   ++    + 
Sbjct: 1   MKRTHTCGELTLQNVDQKVILQGWVKKIRKLGAMVFIDLKDRYGVTQLVIEQENIN--LI 58

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++++E+V+ I G+V+ R  +++N  + TG IE+  + + +++ +E  P  +  +    E
Sbjct: 59  NNLKNEYVIEISGIVVKR--KSVNKELSTGDIEVIVKDLLVINKSELTPFVLENDVNVNE 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R  YR+LDLRR  +  N++ R +I + +R  +   NF+E  TP    S+PEGARDFLV
Sbjct: 117 DTRLTYRYLDLRRQIMQNNLITRAKINHIIRNYLTDLNFLEVETPYFAKSTPEGARDFLV 176

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+N+  FYALPQ+PQ +KQLLM SG DRY+QI  CFRDED R DR P EF QLD+EMS
Sbjct: 177 PSRLNKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQP-EFTQLDLEMS 235

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +D++   E++++ + +E  N        LR+ Y DAI  YG+DKPDLR  + +H +
Sbjct: 236 FATSEDVMQISESLIKKILKEVKNFEIKEPL-LRLSYKDAIDLYGSDKPDLRYDLKIHTL 294

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            + F +S+ ++F     ++   +            +   + +N+ A+      +A+I   
Sbjct: 295 NDIFKNSDIKMF-----LDSQNKYIRAVCIDQLLTKKQLEELNQQAKQFHFNSIAFIKVE 349

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                N A  G +A  L  +  E +    D+++  +     G   +        R ++A+
Sbjct: 350 -----NNAWSGSLASQLTEIQKEQLIKEFDIKNKATIILNIGKYEEISQLMGAIRINLAK 404

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              +   + F+  W++DFP +E++E+E +   AH+PFT P+    +    +     A  Y
Sbjct: 405 MFNLETKDDFKLLWVVDFPLFEFSEQENRYVAAHHPFTSPKEESLADFDTNKKDALACAY 464

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NGFEI  G  R   SE+  + F  V +S++ VE  FG    A++ G P H GIA G
Sbjct: 465 DLVMNGFEIGGGSQRITNSEIQQRMFDAVELSQKQVEANFGWFMNAYKYGAPYHAGIAWG 524

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +DRI M+L  + ++R+V  FP +    D++  +P  VS +QL EL ++ +E
Sbjct: 525 LDRISMILTDSNSIRDVIAFPKNSLGVDMMSNAPDLVSDKQLDELNIKTIE 575


>gi|125717428|ref|YP_001034561.1| aspartyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125497345|gb|ABN44011.1| Aspartyl-tRNA synthetase 1, putative [Streptococcus sanguinis SK36]
          Length = 578

 Score =  532 bits (1370), Expect = e-149,   Method: Composition-based stats.
 Identities = 195/584 (33%), Positives = 319/584 (54%), Gaps = 12/584 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N  I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKAIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNDLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++   ++  F  I Y++A+ R+G+DKPD R  + +  +T+    
Sbjct: 245 IRALVEAMLKAVVKK-THSLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKTLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++       +  +  G    A +     E+G 
Sbjct: 304 NDSLLIKKALDNQEKVMGICVPDAASAFSKKQLSHYYQEMKEFGCSRFANLKV---ENGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +G +A       ++ +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 L--VGDLASTF-EAESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT          G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFED----GQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L + 
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLELK 577


>gi|312148395|gb|ADQ31054.1| aspartyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 586

 Score =  532 bits (1370), Expect = e-149,   Method: Composition-based stats.
 Identities = 224/592 (37%), Positives = 340/592 (57%), Gaps = 10/592 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+ N +    +IA
Sbjct: 1   MFKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVNEEK-LLKIA 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++ E+ + I GL++ R    INAN+ TG  E+ A+ IEI+S   ELP  +  +    E
Sbjct: 60  EKIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + +YR+LDLRRD+L   I+ R +  + +R  +I   F+E  TP    S+PEGARDF++
Sbjct: 120 NSKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVI 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++++I   +EN+L  +F+   N N        I Y  A+ +YG+DKPD R  + + ++
Sbjct: 239 FVKKENIFKLIENMLFLIFKNCININLPKKFKK-ITYKKAMNKYGSDKPDTRFELELQDI 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           + +  +SEF +F   L      ++  +  K    +RA  + + E A+     GL +    
Sbjct: 298 SRNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLYFTKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-IAGDPLKFCSFAADARNHIA 421
                N    G +AK L     E I+    +++ D  FF    +    C      R  IA
Sbjct: 358 -----NNKFSGGIAKFLKTEEQELIKT-YSLENNDIIFFTANNNWKTACKAMGQIRIKIA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+    +    +        
Sbjct: 412 NDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE +E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV+
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583


>gi|324995196|gb|EGC27108.1| aspartate--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 578

 Score =  532 bits (1370), Expect = e-149,   Method: Composition-based stats.
 Identities = 196/584 (33%), Positives = 314/584 (53%), Gaps = 12/584 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N +I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++          F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKKTHGLELTEA-FPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++       +  +  G    A +       GN
Sbjct: 304 NDSLLIKKALDNQEEVMGICVPDAASAFSKKQLSHFYQEMKELGCSRFASLKV-----GN 358

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
              +G +A       ++ +  R + +DGD    +     +        R  +A+ L +IN
Sbjct: 359 GQLVGDLASTF-EAESQELLERFEAKDGDLILLVMAKQRRAQEALGHLRIEVAKALNLIN 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT          G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFED----GQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHNRKAQEAMFELLGMSWEDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L + 
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLELK 577


>gi|161511079|ref|NP_212580.2| aspartyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|195942026|ref|ZP_03087408.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 80a]
 gi|218249506|ref|YP_002374958.1| aspartyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|223888743|ref|ZP_03623334.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|226321756|ref|ZP_03797282.1| aspartyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|6920080|sp|O51402|SYD_BORBU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226736530|sp|B7J213|SYD_BORBZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218164694|gb|ACK74755.1| aspartyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|223885559|gb|EEF56658.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|226232945|gb|EEH31698.1| aspartyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 586

 Score =  531 bits (1369), Expect = e-149,   Method: Composition-based stats.
 Identities = 224/592 (37%), Positives = 338/592 (57%), Gaps = 10/592 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+ N +    +IA
Sbjct: 1   MFKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVNEEK-LLKIA 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++ E+ + I GL++ R    INAN+ TG  E+ A+ IEI+S   ELP  +  +    E
Sbjct: 60  EKIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + +YR+LDLRRD+L   I+ R +  + +R  +I   F+E  TP    S+PEGARDF++
Sbjct: 120 NSKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVI 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++++I   +EN+L  +F+   N N        I Y  A+ +YG+DKPD R  + + ++
Sbjct: 239 FVKKENIFKLIENMLFLIFKNCININLPKKFKK-ITYKKAMNKYGSDKPDTRFELELQDI 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           + +  +SEF +F   L      ++  +  K    +RA  + + E A+     GL +    
Sbjct: 298 SRNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLYFTKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-IAGDPLKFCSFAADARNHIA 421
                N    G +AK L     E I+    +++ D  FF    +    C      R  IA
Sbjct: 358 -----NNKFSGGIAKFLKTEEQELIKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+    +    +        
Sbjct: 412 NDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F  +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFKIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV+
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583


>gi|332363358|gb|EGJ41143.1| aspartate--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 578

 Score =  531 bits (1369), Expect = e-148,   Method: Composition-based stats.
 Identities = 194/584 (33%), Positives = 315/584 (53%), Gaps = 12/584 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N +I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKTLPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFANEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++        + F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKKTHGLELTED-FPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++       +  +  G    A +       GN
Sbjct: 304 NDSLLIKKALDNQEEVMGICVPDAASAFSKKQLSHFYQEMKELGCSRFASLKV-----GN 358

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
              +G +A       ++ +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 359 GQLVGDLASTF-EAESQELLERFETKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++ +P  EWNE++ +    H+PFT          G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVGWPLLEWNEDQNRYQAMHHPFTQGIFED----GQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L + 
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLELK 577


>gi|224532521|ref|ZP_03673146.1| aspartate--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512593|gb|EEF82969.1| aspartate--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 586

 Score =  531 bits (1368), Expect = e-148,   Method: Composition-based stats.
 Identities = 224/591 (37%), Positives = 339/591 (57%), Gaps = 10/591 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+ N +    +IA
Sbjct: 1   MFKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVNEEK-LLKIA 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++ E+ + I GL++ R    INAN+ TG  E+ A+ IEI+S   ELP  +  +    E
Sbjct: 60  EKIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + +YR+LDLRRD+L   I+ R +  + +R  +I   F+E  TP    S+PEGARDF++
Sbjct: 120 NSKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVI 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++++I   +EN+L  +F+   N N        I Y  A+ +YG+DKPD R  + + ++
Sbjct: 239 FVKKENIFKLIENMLFLIFKNCININLPKKFKK-ITYKKAMNKYGSDKPDTRFELELQDI 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           + +  +SEF +F   L      ++  +  K    +RA  + + E A+     GL +    
Sbjct: 298 SRNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLYFTKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-IAGDPLKFCSFAADARNHIA 421
                N    G +AK L     E I+    +++ D  FF    +    C      R  IA
Sbjct: 358 -----NNKFSGGIAKFLKTEEQELIKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+    +    +        
Sbjct: 412 NDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE +E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIV 582


>gi|225552077|ref|ZP_03773017.1| aspartyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371075|gb|EEH00505.1| aspartyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 586

 Score =  531 bits (1368), Expect = e-148,   Method: Composition-based stats.
 Identities = 220/592 (37%), Positives = 335/592 (56%), Gaps = 10/592 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+ N +    +IA
Sbjct: 1   MFKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVNEEK-LLKIA 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++ E+ + I GL++ R    INAN+ TG  E+ A+ IEI+S   ELP  +       E
Sbjct: 60  EKIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDNNNASE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + +YR+LDLR+D+L   I+ R +  + +R  +I   F+E  TP    S+PEGARDF+V
Sbjct: 120 NSKLEYRYLDLRKDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVV 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++++I   +EN+L  +F+   N N        I Y  A+ +YG+DKPD R  + + ++
Sbjct: 239 FVKKENIFKLIENMLFLIFKNCININLPKKFKK-ITYKKAMNKYGSDKPDTRFELELQDI 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           + +  +SEF +F   L      ++  +  K    +R   + + E A+     GL +    
Sbjct: 298 SRNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRTKINNLEEIAKLYKAQGLYFTKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-IAGDPLKFCSFAADARNHIA 421
                N    G +AK L     + +     +++ D   F    +    C      R  IA
Sbjct: 358 -----NNKFSGGIAKFLKTEE-QELMKTYSLENNDIILFTANNNWETACKAMGQIRIKIA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+    +    +        
Sbjct: 412 NDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV+
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583


>gi|224533525|ref|ZP_03674114.1| aspartyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|224513198|gb|EEF83560.1| aspartyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
          Length = 586

 Score =  531 bits (1368), Expect = e-148,   Method: Composition-based stats.
 Identities = 224/592 (37%), Positives = 340/592 (57%), Gaps = 10/592 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+ N +    +IA
Sbjct: 1   MFKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVNEEK-LLKIA 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++ E+ + I GL++ R    INAN+ TG  E+ A+ IEI+S   ELP  +  +    E
Sbjct: 60  EKIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + +YR+LDLRRD+L   I+ R +  + +R  +I   F+E  TP    S+PEGARDF++
Sbjct: 120 NSKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVI 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++++I   +EN+L  +F+   N N        I Y  A+ +YG+DKPD R  + + ++
Sbjct: 239 FVKKENIFKLIENMLFLIFKNCININLPKKFKK-ITYKKAMNKYGSDKPDTRFELELQDI 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           + +  +SEF +F   L      ++  +  K    +RA  + + E A+     GL +    
Sbjct: 298 SRNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLYFTKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-IAGDPLKFCSFAADARNHIA 421
                N    G +AK L     E I+    +++ D  FF    +    C      R  IA
Sbjct: 358 -----NNKFSGGIAKFLKTEEQELIKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+    +    +        
Sbjct: 412 NDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE +E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV+
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583


>gi|325690285|gb|EGD32289.1| aspartate--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 578

 Score =  531 bits (1368), Expect = e-148,   Method: Composition-based stats.
 Identities = 197/592 (33%), Positives = 321/592 (54%), Gaps = 15/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M ++     G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F 
Sbjct: 1   MKKF---FIGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFA 57

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +  E ++ + G V+ R    +N +I +GQIEL A+KIE+++ ++ LP  +      
Sbjct: 58  KLEDIGKEDIIAVTGQVVQREERFVNKSIKSGQIELRAEKIEVIASSKALPFELDQHAHT 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR+ + +N+  R ++ +++R  +   +F+E  TP LT S+PEGARDF
Sbjct: 118 GEDLRQKYRYLDLRREKMTQNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV +  FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E
Sbjct: 178 LVPSRVYKNQFYALPQSPQILKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLE 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF  +++I   +E +L+ V ++        + F  I Y++A+ R+G+DKPD R  + + 
Sbjct: 237 LSFANEEEIRALVEAMLKSVVKKTHGLELTED-FPTISYEEAMSRFGSDKPDTRFDLELK 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+    +E  +  K L          +P      ++       +  +       A + 
Sbjct: 296 SLTDLCQANESLLIKKALDNQEEVMGICVPDAASAFSKKQLSHYYQEMKEFCCSRFASLK 355

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               E+G +  +G +A       ++ +  R + +DGD    +     +        R  +
Sbjct: 356 V---ENGQL--VGDLASTF-EAESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEV 409

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A  L +I+ +   F W++D+P  EWNE++ +    H+PFT         +G +    ++ 
Sbjct: 410 ANALDLIDPSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFE----EGQEPGQFRSH 465

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R H  +     F  +G+SKE  E  FG    A + G PPHGG+A
Sbjct: 466 AYDIVLNGYEIGGGSLRIHDRKAQEAMFELLGMSKEDYERDFGFFLEALEYGFPPHGGLA 525

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VM+L G +N+R+V  FP +    D ++ SPS V   QL+EL L + 
Sbjct: 526 LGLDRLVMILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLELK 577


>gi|293115523|ref|ZP_05791905.2| aspartate--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809569|gb|EFF68774.1| aspartate--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 594

 Score =  531 bits (1368), Expect = e-148,   Method: Composition-based stats.
 Identities = 252/593 (42%), Positives = 362/593 (61%), Gaps = 19/593 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR  +  +L  S +G  ++++GWV  +R HGG+ F+D+RD YG+ QVV        E+ K
Sbjct: 18  YRDMTLENLDESYIGKELKVAGWVENIRDHGGVSFIDLRDMYGVLQVVIRDT----ELLK 73

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122
            ++ E  + ++GL+  R  ET N  I +G IEL A KI  L  V  +LP  +   +E  E
Sbjct: 74  GIKKEESISVEGLMEQRDEETYNPKIKSGTIELEAHKITTLGQVYTQLPFEIQTSKEVRE 133

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR + +  NI+ R+++I  +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 134 DVRLKYRYLDLRNEKVKDNILFRSKVIAYLRQKMTEMGFVEIQTPILCASSPEGARDYIV 193

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM SG D+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 194 PSRRYKGKFYALPQAPQQYKQLLMVSGIDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 253

Query: 243 FVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+D+    E VL   FE+F+          +  I Y  A+  +G+DKPDLRNP+ + 
Sbjct: 254 FATQEDVFKIGEEVLTSTFEKFAPEGYEVTKAPYPIISYKQAMLEFGSDKPDLRNPLRII 313

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT+ F    F+ F     +        +       ++ F +++ ++A   G  GL Y+ 
Sbjct: 314 DVTDFFQKCTFKPF-----IGKTVRAIKVH---ANMSKGFHEKLLKFATGIGMGGLGYLE 365

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D     +  GP+ K +     E  +    +  GD+ FF+A    +   FA   R  +
Sbjct: 366 VLEDG----SYKGPIDKFIPDELKEEFKTIAGLSTGDTIFFMADKEERAAFFAGQIRTEL 421

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +L +I  N + FC++ DFP +E + E KKI F HNPF+MPQGG+E+L   D L I A+
Sbjct: 422 GTKLDLIEKNAYRFCYVNDFPMFEKDPETKKIGFTHNPFSMPQGGLEALNTKDPLDILAY 481

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH  ++M++AF   G  +EV++ +FG LY AFQ G PPH G+A
Sbjct: 482 QYDIVCNGVELSSGAVRNHDMQIMVKAFEIAGYDEEVLKAKFGALYNAFQFGAPPHAGMA 541

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DR++MLL   +N+REV  FPMS    DL+ G+P+ V+ +QLRE+ +++ +
Sbjct: 542 PGVDRMIMLLRNEENIREVIAFPMSGTAQDLMCGAPNEVTEQQLREVHIKVRD 594


>gi|324990753|gb|EGC22689.1| aspartate--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 578

 Score =  531 bits (1368), Expect = e-148,   Method: Composition-based stats.
 Identities = 196/592 (33%), Positives = 322/592 (54%), Gaps = 15/592 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M ++     G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F 
Sbjct: 1   MKKF---FIGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFA 57

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +  E ++ + G V+ R    +N +I +GQIEL A+KIE+++ ++ LP  +      
Sbjct: 58  KLEDIGKEDIIAVTGQVVQREERFVNKSIKSGQIELRAEKIEVIASSKALPFELDQHAHT 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR+ + +N+  R ++ +++R  +   +F+E  TP LT S+PEGARDF
Sbjct: 118 GEDLRQKYRYLDLRREKMTQNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV +  FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E
Sbjct: 178 LVPSRVYKNQFYALPQSPQILKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLE 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF  +++I   +E +L+ V ++        + F  I Y++A+ R+G+DKPD R  + + 
Sbjct: 237 LSFANEEEIRALVEAMLKSVVKKTHGLELTED-FPTISYEEAMSRFGSDKPDTRFDLELK 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+    +E  +  K L          +P      ++       +  +       A + 
Sbjct: 296 SLTDLCQANESLLIKKALDNQEEVMGICVPDAASAFSKKQLSHYYQEMKEFCCSRFASLK 355

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               E+G +  +G +A       ++ +  R + +DGD    +     +        R  +
Sbjct: 356 V---ENGQL--VGDLASTF-EAESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEV 409

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+ L +I+ +   F W++D+P  EWNE++ +    H+PFT         +G +    ++ 
Sbjct: 410 AKALDLIDPSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFE----EGQEPDQFRSH 465

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A
Sbjct: 466 AYDIVLNGYEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLA 525

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            G+DR+VM+L G +N+R+V  FP +    D ++ SPS V   QL+EL L + 
Sbjct: 526 LGLDRLVMILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLELK 577


>gi|332363919|gb|EGJ41698.1| aspartate--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 578

 Score =  531 bits (1367), Expect = e-148,   Method: Composition-based stats.
 Identities = 194/584 (33%), Positives = 318/584 (54%), Gaps = 12/584 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G V+ R    +N +I +GQIEL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DIIAVTGQVVQREERFVNKSIKSGQIELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ + +N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSR+ +
Sbjct: 126 RYLDLRREKMTQNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRIFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++        + F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKKTHGLELTED-FPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++       +  +  G    A +     E G 
Sbjct: 304 NDSLLIKKALDNQEEVMGICVPGATSAFSKKQLSHYYQEMKEFGCSRFASLKV---EGGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +G +A  L    ++ +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 L--IGDLASTL-EAESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIELAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT          G +    ++  YD+  NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFED----GQEPGQFRSHAYDIALNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHERKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L + 
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLELK 577


>gi|317497925|ref|ZP_07956234.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|291560551|emb|CBL39351.1| aspartyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
 gi|316894804|gb|EFV16977.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 581

 Score =  531 bits (1367), Expect = e-148,   Method: Composition-based stats.
 Identities = 250/594 (42%), Positives = 365/594 (61%), Gaps = 19/594 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YRT +   +   D+G+ ++++GWV  +R HGG+ F+D+RD YG+ QVV    S    + 
Sbjct: 4   MYRTRTMDQISEGDIGAQLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVLRDTS----LL 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYP 121
             VR E  L ++G++  R  ET N  I TG IEL A KI+IL     +LP  +   +E  
Sbjct: 60  DHVRKEECLSVEGVIQHRDEETFNPKIPTGTIELEAHKIDILGKVYRDLPFEIATSKEIR 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LD+R   +  NI+ R+++I  +R +M    F+E  TPIL ASSPEGARD++
Sbjct: 120 EDVRLKYRYLDMRNRKVKDNILFRSKVIRFLREKMEDMGFVEVQTPILCASSPEGARDYV 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR  +G FYALPQAPQQYKQLLM SG D+Y+QIAPCFRDED R+DR PGEFYQLD EM
Sbjct: 180 VPSRKYKGKFYALPQAPQQYKQLLMVSGIDKYYQIAPCFRDEDARADRSPGEFYQLDFEM 239

Query: 242 SFVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           +F  Q+D+    E VL   F++F+          +    Y +A+ ++G+DKPDLRNP+ +
Sbjct: 240 AFATQEDVFKIGEEVLTETFKKFAPEGSVITEAPYPIFSYKEAMLQFGSDKPDLRNPLRI 299

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +VT+ F    F+ F              + AK    ++   +++ ++A+S G  GL Y+
Sbjct: 300 IDVTDFFQRCTFKPFH-----GQTVRAINVHAK---LSKGQHEKLLKFAQSIGMGGLGYL 351

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             +      +   GP+ K +       +     +Q+GD+ FFIA      C +A   RN 
Sbjct: 352 EVKE----ELKYKGPIDKFIPDDMKMELAEMAGLQEGDTIFFIAAPEKAACIYAGQIRNE 407

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +   L ++  + + FC+I DFP YE +EE  K+ F HNPF+MPQGG+E+L   D L I A
Sbjct: 408 LGSRLDLLEKDAYRFCYINDFPMYEIDEETGKLGFTHNPFSMPQGGLEALNEKDPLDILA 467

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYD+VCNG E++SG +RNH  E+M +AF   G  KE ++++FG LY AFQ G PPH G+
Sbjct: 468 YQYDIVCNGVELSSGAVRNHDMEIMEKAFDIAGYDKETLKDKFGALYNAFQFGAPPHAGM 527

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G+DR++MLL   +N+RE+  FPMS    DL+ G+P+ ++ +QLRE+ +++ +
Sbjct: 528 APGVDRMIMLLRNEENIREIIAFPMSGTAQDLMCGAPNEITEQQLREVHIKVRD 581


>gi|312149409|gb|ADQ29480.1| aspartyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 586

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 221/592 (37%), Positives = 336/592 (56%), Gaps = 10/592 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+ N +    +IA
Sbjct: 1   MFKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLINEEK-LLKIA 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++ E+ + I GL++ R    IN N+ TG  E+ A+ IEI+S   ELP  +  +    E
Sbjct: 60  EKIKLEYCIKIQGLLIKRPPNMINTNMKTGHFEILAKNIEIISKCNELPFMIEDDNNASE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + +YR+LDLRRD+L   I+ R +  + +R  +I   F+E  TP    S+PEGARDF++
Sbjct: 120 NSKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVI 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++++I   +EN+L  +F+   N N        I Y  A+ +YG+DKPD R  + + ++
Sbjct: 239 FVKKENIFKLIENMLFLIFKNCININLPKKFKK-ITYKKAMNKYGSDKPDTRFELELQDI 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           + +  +SEF +F   L      ++  +  K    +RA  + + E A+     GL +    
Sbjct: 298 SRNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLYFTKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-IAGDPLKFCSFAADARNHIA 421
                N    G +AK L     + +     +++ D  FF    +    C      R  IA
Sbjct: 358 -----NNKFSGGIAKFLKTEE-QKLMKTYSLENNDIIFFTANNNWETACKAMGQIRIKIA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+    +    +        
Sbjct: 412 NDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F  +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFKIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV+
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583


>gi|325696980|gb|EGD38867.1| aspartate--tRNA ligase [Streptococcus sanguinis SK160]
 gi|327458858|gb|EGF05206.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 578

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 194/584 (33%), Positives = 319/584 (54%), Gaps = 12/584 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N  I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKAIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNDLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++   ++  F  I Y++A+ R+G+DKPD R  + +  +T+    
Sbjct: 245 IRALVEAMLKAVVKK-THSLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKTLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++       +  +  G    A +     E+G 
Sbjct: 304 NDSLLIKKALDNQEKVMGICVPDAASAFSKKQLSHYYQEMKEFGCSRFANLKV---ENGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +G +A       ++ +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 L--VGDLASTF-EAESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT            +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFEDRQ----EPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +L G +N+R+V  FP +    D ++ SPS V + QL+EL L + 
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDLRQLKELHLELK 577


>gi|226321078|ref|ZP_03796620.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233488|gb|EEH32227.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 586

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 222/592 (37%), Positives = 337/592 (56%), Gaps = 10/592 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+ N +    +IA
Sbjct: 1   MFKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLINEEK-LLKIA 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++ E+ + I GL++ R    INAN+ TG  E+ A+ IEI+S   ELP  +  +    E
Sbjct: 60  EKIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + +YR+LDLRRD+L   I+ R +  + +R  +I   F+E  TP    S+PEGARDF++
Sbjct: 120 NSKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVI 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++++I   +EN+L  +F+   N N        I Y  A+ +YG+DKPD R  + + ++
Sbjct: 239 FVKKENIFKLIENMLFLIFKNCININLPKKFKK-ITYKKAMNKYGSDKPDTRFELELQDI 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           + +  +SEF +F   L      ++  +  K    +RA  + + E A+     GL +    
Sbjct: 298 SRNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLYFTKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-IAGDPLKFCSFAADARNHIA 421
                N    G +AK L     + +     +++ D  FF    +    C      R  IA
Sbjct: 358 -----NNKFSGGIAKFLKTEE-QELMKTYSLENNDIIFFTANNNWETACKAMGQIRIKIA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+    +    +        
Sbjct: 412 NDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F  +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFKIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV+
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583


>gi|157151355|ref|YP_001449750.1| aspartyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157076149|gb|ABV10832.1| aspartyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 578

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 194/585 (33%), Positives = 316/585 (54%), Gaps = 12/585 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +   GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTAQGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEEIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G V+ R    +N  I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DLIAVTGQVVQREERFVNKAIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEGARDFLVPSRVYK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V +           F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKTTHGLELTEA-FPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           +E  +  K L          +P      ++       +  +  G    A +     E+G 
Sbjct: 304 NESLLIKKALDNQEEVMGICVPDAASAFSKKQLSHYYQEMKEFGCSRFASLKV---ENGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +G +A       ++ +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 L--VGDLASTF-EAESQELLTRFEAKDGDLILLVMAKKHRAQEALGHLRLEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT         +G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFE----EGQEPGQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +L G +N+R+V  FP +    D ++ SPS V   Q++EL L + +
Sbjct: 534 ILTGEQNIRQVIAFPKNGTGFDPMLESPSLVDQRQVKELHLELKK 578


>gi|327469121|gb|EGF14593.1| aspartate--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 578

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 196/584 (33%), Positives = 318/584 (54%), Gaps = 12/584 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIKDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N +I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  + + +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNSLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++          F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKKTHGLELTEA-FPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++       +  +  G    A +     E+G 
Sbjct: 304 NDSLLIKKALDNQEEVMGICVPDAASAFSKKQLSHYYQEMKEFGCSRFASLKI---ENGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +A  G +A       ++ +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 LA--GDLASTF-EAESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKVLDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT          G +    ++  YD+V NG
Sbjct: 418 ASLLHFLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFQD----GQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +GI +E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGIGREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +L G +N+R+V  FP +    D ++ SPS V + QL+EL L + 
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDLRQLKELHLELK 577


>gi|221218187|ref|ZP_03589653.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|225549503|ref|ZP_03770469.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|221192135|gb|EEE18356.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|225369780|gb|EEG99227.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 586

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 223/592 (37%), Positives = 339/592 (57%), Gaps = 10/592 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+ N +    +IA
Sbjct: 1   MFKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVNEEK-LLKIA 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++ E+ + I GL++ R    INAN+ TG  E+ A+ IEI+S   ELP  +       E
Sbjct: 60  EKIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDNNNASE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + +YR+LDLRRD+L   I+ R +  + +R  +I   F+E  TP    S+PEGARDF++
Sbjct: 120 NSKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVI 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++++I   +EN+L  +F+   N N        I Y  ++ +YG+DKPD R  + + ++
Sbjct: 239 FVKKENIFKLIENMLFLIFKNCININLPKKFKK-ITYKKSMNKYGSDKPDTRFELELQDI 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           + +  +SEF +F   L      ++  +  K    +RA  + + E A+     GL +    
Sbjct: 298 SRNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLYFTKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-IAGDPLKFCSFAADARNHIA 421
                N    G +AK L     E I+    +++ D  FF    +    C      R  IA
Sbjct: 358 -----NNKFSGGIAKFLKTEEQELIKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+    +    +        
Sbjct: 412 NDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE +E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV+
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIVD 583


>gi|325693546|gb|EGD35465.1| aspartate--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 578

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 195/584 (33%), Positives = 313/584 (53%), Gaps = 12/584 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N  I +GQIEL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKAIKSGQIELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNRLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+Q+  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQLVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++          F  I Y++A+ R+G+DKPD R  + + N+T+    
Sbjct: 245 IRALVEAMLKAVVKKTHGLELTEA-FPTISYEEAMSRFGSDKPDTRFGLELKNLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++       +  +  G    A +        N
Sbjct: 304 NDSLLIKKALDSQEEVMGICVPDAASAFSKKQLSHYYQEMKEFGCSRFASLKVE-----N 358

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
              +G +A       +  +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 359 SQLVGDLASTF-EAESRDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT         +G +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFE----EGQEPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L + 
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLELK 577


>gi|301057107|ref|ZP_07198247.1| aspartate--tRNA ligase [delta proteobacterium NaphS2]
 gi|300448788|gb|EFK12413.1| aspartate--tRNA ligase [delta proteobacterium NaphS2]
          Length = 727

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 215/632 (34%), Positives = 335/632 (53%), Gaps = 34/632 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M       CG L  SD G  V L GWV  +R HG I+F  +RD  GI QV+ +P  +   
Sbjct: 4   MSWKERKYCGALTDSDAGRSVLLMGWVDAIRDHGNILFFHLRDISGIVQVIFDPQKEKDS 63

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE- 117
           ++ A  +R E+V+ + G V++R     N  + TG+IE+ A  +EILS ++ +P  +  + 
Sbjct: 64  YDTAALIREEYVIEVHGRVIARDKTAENPALATGKIEVMANAVEILSKSKAVPFQISEKA 123

Query: 118 -----------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                          E IR KYR+LDLRR ++    +KR +II  +R  +   NFIE  T
Sbjct: 124 MVFGEEIQTGPENVDEEIRLKYRYLDLRRPSVQDIFLKRYQIIKCIRDYLDTLNFIEIET 183

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P LT S+PEGARD+LVPSR++ G FYALPQ+PQ +KQ+LM  G DRYFQIA CFRDED R
Sbjct: 184 PFLTRSTPEGARDYLVPSRIHHGKFYALPQSPQLFKQILMIGGMDRYFQIARCFRDEDLR 243

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
            +R P EF QLD+E SF++++ I  T+E +   +F     G ++S  F R+ Y+ A+ +Y
Sbjct: 244 PNRQP-EFTQLDLEASFIDEEFIYETLEALTVQMFA--VGGISLSGPFPRMTYETAMNKY 300

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           GTD+PDLR  +   + T+ F  +++ +F +I+        +++    G  ++      N+
Sbjct: 301 GTDRPDLRFKMAFEDTTDIFQDTQYAIFRQIIEKGGQIRGFSVSDPEGVLSKNILQ--ND 358

Query: 347 WARS----QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
           +A+      G  GL ++       G +     + +  +    +A+  R   ++GD    I
Sbjct: 359 YAQRVVPRFGAKGLTWMKVI---DGKL--QSNIVQFFSANEQKALMNRFQAKNGDVFMMI 413

Query: 403 AG-DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
           A              R H+A  L +I  + +   W+ DFP +E   ++ +I   H+PFTM
Sbjct: 414 ADLSGDLVKKVLGRLRIHVANRLNLIPLDQWRPLWVTDFPLFEL--KDGRISSQHHPFTM 471

Query: 462 PQGGMESLKGND-LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
           P          + LL++K+  YDLV NG E+  G IR H  +V  + FS +G+  +    
Sbjct: 472 PDRTDFDPTDTEALLTLKSRAYDLVMNGEELGGGSIRIHRMDVQEKIFSALGLDHQEAAA 531

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
           +FG   +A + G PPHGG+A G+DR++ ++L   ++R+V  FP ++     L  +PS   
Sbjct: 532 KFGFFLKALEYGTPPHGGLALGLDRVIAMILKTPSIRDVIAFPKNRKAFCPLTEAPSMAD 591

Query: 581 VEQLRELGLRIVENPKKILKISVTTILRNVYG 612
            +QL EL L +     K  + +  T   +  G
Sbjct: 592 TKQLEELALNVPSENAK--RGTTKTEPSSTEG 621


>gi|167760781|ref|ZP_02432908.1| hypothetical protein CLOSCI_03166 [Clostridium scindens ATCC 35704]
 gi|167661668|gb|EDS05798.1| hypothetical protein CLOSCI_03166 [Clostridium scindens ATCC 35704]
          Length = 757

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 263/594 (44%), Positives = 366/594 (61%), Gaps = 22/594 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
             YRT  C D+    VG  V+L+GWV  +R HGG+IF+DIRD+ G+TQ V        E+
Sbjct: 65  QMYRTLYCNDIREEHVGQTVQLAGWVDAIRDHGGVIFVDIRDYTGVTQTVI----HNEEL 120

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
            K+V  E V+ + G+V  R  +T+N  I TG +EL   ++ +L  ++ + P  V   R  
Sbjct: 121 LKNVNRETVISLKGVVEKRDPDTVNEKIATGIVELVVSELVVLGKSKNMLPFDVSSSRNI 180

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LDLR    H N+V R++II  +R +M  ++F+E  TPILTASSPEGARDF
Sbjct: 181 KDELRLKYRYLDLRNPKNHDNLVMRSKIIRHLRNKMEEKDFLEIQTPILTASSPEGARDF 240

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR + G FYALPQAPQQ+KQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD E
Sbjct: 241 LVPSRKHPGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFE 300

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F  Q+++LN  E+V+   F  FS+       F RI Y DA+  YG+DKPDLRNP+++ 
Sbjct: 301 MAFATQEEVLNICEDVIYDTFVTFSDKKVTEKPFRRITYADAMMTYGSDKPDLRNPLLIC 360

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ--GQPGLAY 358
           ++T  F    F  F           V  I A   G ++ F +   ++A S      GL Y
Sbjct: 361 DLTAFFADVAFPAFRGKP-------VRGIVADCRGKSKKFFEDSLKYAMSDEVALGGLGY 413

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL-KFCSFAADAR 417
           I  +          GP+AK L+      I    ++++G++ FFI  D        A   R
Sbjct: 414 ITLKEGA-----FAGPIAKFLSDEKKAEITSLTNIKEGETLFFICDDKKNDAEKKAGLIR 468

Query: 418 NHIAQE--LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
             +A++  L +I  + FEFC+++DFP YE +EE  +  F HNPF+MPQGGM++L G D  
Sbjct: 469 TWLAKKENLDLIRDDAFEFCFVVDFPMYEIDEETGETIFTHNPFSMPQGGMDALLGKDPT 528

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + A+QYDLVCNG E+ASG +RNH  ++M +AF   G  ++ ++ RF  LY AFQ G PP
Sbjct: 529 EVLAYQYDLVCNGIELASGAVRNHDIDIMKKAFEIAGYDEQELKERFNALYTAFQYGAPP 588

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           H G+A G+DR+VMLL   + + +V  FP++ N  DLL+G+PS V+ +QL ++ L
Sbjct: 589 HAGMAPGVDRMVMLLTDEEKILDVIAFPLNGNAQDLLLGAPSEVTSQQLEDVHL 642


>gi|216264214|ref|ZP_03436206.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|225548601|ref|ZP_03769648.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|215980687|gb|EEC21494.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|225370631|gb|EEH00067.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 586

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 222/591 (37%), Positives = 338/591 (57%), Gaps = 10/591 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++   C +L    +   V ++ WV ++R HG  IFL+IRD Y   QV+ N +    +IA
Sbjct: 1   MFKVIKCNELNEKLIDKKVEINAWVKKIRHHGKFIFLNIRDRYEKAQVLVNEEK-LLKIA 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++ E+ + I GL++ R    INAN+ TG  E+ A+ IEI+S   ELP  +  +    E
Sbjct: 60  EKIKLEYCIKIQGLLIKRPPNMINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + +YR+LDLRRD+L   I+ R +  + +R  +I   F+E  TP    S+PEGARDF++
Sbjct: 120 NSKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVI 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++++I   +EN+L  +F+   N N        I Y  A+ +YG+DKPD R  + + ++
Sbjct: 239 FVKKENIFKLIENMLFLIFKNCININLPKKFKK-ITYKKAMNKYGSDKPDTRFELELQDI 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           + +  +SEF +F   L      ++  +  K    +RA  + + E A+     GL +    
Sbjct: 298 SRNLKNSEFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLYFTKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-IAGDPLKFCSFAADARNHIA 421
                N    G +AK L     + +     +++ D  FF    +    C      R  IA
Sbjct: 358 -----NNKFSGGIAKFLKTEE-QKLMKTYSLENNDIIFFTANNNWETACKAMGQIRIKIA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+    +    +        
Sbjct: 412 NDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEI 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE +E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIV 582


>gi|15639969|ref|NP_219422.1| aspartyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189026208|ref|YP_001933980.1| aspartyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094395|sp|O83950|SYD_TREPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238689353|sp|B2S4M2|SYD_TREPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3323310|gb|AAC65942.1| aspartyl-tRNA synthetase (aspS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018783|gb|ACD71401.1| aspartyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|291060342|gb|ADD73077.1| aspartyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 602

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 226/593 (38%), Positives = 325/593 (54%), Gaps = 11/593 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--F 59
           +  RT +CG+L    VG+ V L+GWVHR R HG + F ++RD  GI QV+ + +     +
Sbjct: 16  YPRRTIACGELRRCHVGTVVVLNGWVHRKRSHGTVSFFNMRDRSGIVQVIVSQEENASLW 75

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
                +R E  L ++G+V  R    IN  + TG++E+ A+ + +LS    LP  V     
Sbjct: 76  STVNRIRLECCLAVEGVVRERPPSMINRALHTGEVEVHARTLYVLSENAVLPFRVDDVVH 135

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR KYR+LDLR   + + I  R+R+  ++R  +  + FIE  TP    S+PEGARD
Sbjct: 136 AHEDIRLKYRYLDLRSQRMQERIALRSRVALAIRQFLSMKGFIEIETPTFICSTPEGARD 195

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VPSRV  G FYALPQ+PQ YKQLLM +GFDRYFQ+A C+RDED R DR P EF Q+D+
Sbjct: 196 FVVPSRVCPGRFYALPQSPQLYKQLLMVAGFDRYFQLARCYRDEDARGDRQP-EFTQIDL 254

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV +DD++   E++LR VF        +   F R+ Y  A+ +YGTDKPD+R   ++
Sbjct: 255 EMSFVSRDDVMRVNEDMLRYVFRTSIGVE-LPTFFPRLTYAQALDQYGTDKPDMRFKPVL 313

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            N     +   F  F ++++         +P K    +R   + +   AR+     L ++
Sbjct: 314 QNADFMGMLGTFTPFEEVVAQGGSIRALVLPGKARCYSRRQIEALESIARAHEAHHLFWL 373

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS-FAADARN 418
                        G +A+    V +E +R RL  QD D   F+A    + C       R+
Sbjct: 374 KAT-----GGGLEGGIARFFAGVESE-VRRRLSAQDEDLLLFVADCRHRVCCVALGAVRS 427

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            + ++        F F WI+DFP +EWN  E K D AH+ F+ PQ         D  S+K
Sbjct: 428 ALIRDESFPEKELFSFVWIVDFPLFEWNPAENKWDPAHHMFSAPQEQYLETLEQDPGSVK 487

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YDLV NG+E+ASG IR H +++  + F  VG+  E    +FG L  AF+ G PPHGG
Sbjct: 488 GDLYDLVLNGYELASGSIRIHDTQLQKRIFKIVGLDPEEAGEKFGFLTEAFKYGAPPHGG 547

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IA G+DR+VML+ G++++R+V  FP +      L   PS +   QL EL L +
Sbjct: 548 IAHGLDRLVMLMTGSESIRDVIAFPKNTLAASPLDNCPSVLDKRQLDELHLTV 600


>gi|315222433|ref|ZP_07864334.1| aspartyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188457|gb|EFU22171.1| aspartyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 579

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 210/584 (35%), Positives = 316/584 (54%), Gaps = 11/584 (1%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    DS  F     +  E
Sbjct: 6   IGNYGLEQVGQKMTATGWVANIRNHGKLAFIELRDREGLLQVFVAGDSPAFAEIDHLHKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R +  +N  I +GQ+EL A+ I+ILS ++ LP  V       E +R KY
Sbjct: 66  DVIAVTGEVVERESRFVNKAIKSGQVELRAEAIQILSNSKPLPFEVDQHAHTGEELRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR  + +N+  R ++ +++R  +  ++F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRRSKMTENLKLRHQVTSTIRDYLNGKDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+Q+  CFRDED R DR P EF Q+DMEMSF  + D
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQVVRCFRDEDLRGDRQP-EFTQVDMEMSFASEKD 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++          F  I Y++A+ R+GTDKPD R  + + N+T     
Sbjct: 245 IRMLVEEMLKAVVKKTHGLELTEA-FPTISYEEAMNRFGTDKPDTRFGLELKNLTALCQD 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           +   +  +  + +       +P       +       +  +  G    A +     E+G 
Sbjct: 304 NSSLLLKQAFARHEELWGICVPDAADSFTKKQLSHFYQEMKEFGASRFASLKV---EAGE 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +   G +A         A   RL+ QDGD    +     +        R  IA++L +I+
Sbjct: 361 L--QGDLASTF-EAEAAAFLDRLEAQDGDLLLLVIAKKRQAQEALGHLRLEIAKQLDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNEE+ +    H+PFT      E     DL SIK+  YD+V NG
Sbjct: 418 QSQLNFLWVLDWPLLEWNEEQGRYQAMHHPFTQGIFENE---KEDLASIKSHAYDIVLNG 474

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+ KE  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 475 YEIGGGSLRIHDRKSQEAMFELLGMEKEDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 534

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +L+G +N+R+V  FP +    D ++ SPS V   Q++EL L + 
Sbjct: 535 ILVGEENIRQVIAFPKNGTGFDPMLESPSQVDASQVKELHLELK 578


>gi|332366171|gb|EGJ43927.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 578

 Score =  529 bits (1362), Expect = e-148,   Method: Composition-based stats.
 Identities = 195/584 (33%), Positives = 318/584 (54%), Gaps = 12/584 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMIATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N +I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKSIKSGQVELRAEKIELIASSKVLPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPCLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++        + F  I Y++A+ R+G+DKPD R  + + ++T+    
Sbjct: 245 IRALVEAMLKAVVKKTHGLELTED-FPTISYEEAMSRFGSDKPDTRFGLELKSLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++       +  +  G    A +     E+G 
Sbjct: 304 NDSLLIKKALDNQEEVMGICVPDAASAFSKKQLSHHYQEMKEFGCSRFASLKV---ENGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +G +A       ++ +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 L--VGDLASTF-EAESQDLLARFEAKDGDLILLVMAKQRRAQEALGHLRIEVAKALNLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  EWNE++ +    H+PFT      E     +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFEDEQ----EPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +L G +N+R+V  FP +    D ++ SPS V   QL+EL L + 
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDQRQLKELHLELK 577


>gi|260437931|ref|ZP_05791747.1| aspartate--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809682|gb|EFF68887.1| aspartate--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 587

 Score =  529 bits (1362), Expect = e-148,   Method: Composition-based stats.
 Identities = 255/602 (42%), Positives = 368/602 (61%), Gaps = 20/602 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACF 59
           M + RTH+CG+L ++D G  V + GW   +R     + FL +RD YG TQVV   +    
Sbjct: 1   MVQSRTHNCGELRLADAGKDVTVVGWYENIRKVSKNLGFLILRDFYGTTQVVIETEDMM- 59

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-- 117
            +  SV  E  + + G+V  RS++  NA + TG+IE+   KIE+L       LP      
Sbjct: 60  SVIDSVNKESTIQVTGVVRERSSK--NAELPTGEIEVVPSKIEVLGKCRYNALPFEINQS 117

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           ++  E+ R KYR+LDLR   +  NI+ R++I+  +R +M +  F+E +TPILT SSPEGA
Sbjct: 118 KDADENTRLKYRYLDLRNPAVKGNIILRSKIVAELRNKMNSLGFMEITTPILTCSSPEGA 177

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVP+R + G FYALPQAPQQ+KQ+LMASGFDRYFQIAPCFRDED R+DR PGEFYQL
Sbjct: 178 RDYLVPARNHPGKFYALPQAPQQFKQILMASGFDRYFQIAPCFRDEDARADRSPGEFYQL 237

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNG-NTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           DMEM+F  Q+D+ + +E VL  VF ++    N     F+RI Y +++ +YGTDKPDLR  
Sbjct: 238 DMEMAFASQEDVFSVIEEVLPPVFAKYGVYSNASKAPFVRIPYLESMDKYGTDKPDLRID 297

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           +++ + TE      F  F           V AI   G    R   D +   A  +     
Sbjct: 298 LVLTDATELLSGCGFGPFEG-------QTVKAIVVDGFTATRKQIDAI--CADVEVATAN 348

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
              ++++DE+G +   G +AK L     E +   L ++ GD     AG  L     A   
Sbjct: 349 KAYWFKVDENGEIT--GGIAKFL-QNIKEQVINTLGLKPGDFVGLTAGKKLVAQKTAGVL 405

Query: 417 RNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           R  +       +  N +EFCWI+DFP YE  EE  +++F HNPF+MPQGGM++LK  + L
Sbjct: 406 RRLLGAASEKHMKQNTYEFCWIVDFPMYEIGEESGELEFCHNPFSMPQGGMDALKNKEPL 465

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            I A+QYDLVCNG E++SG +RNH  E+M++AF  VG+ ++ V+ +F  +Y AF  G PP
Sbjct: 466 DILAYQYDLVCNGVELSSGAVRNHDPEIMIEAFRLVGLGEDDVKAKFPAMYNAFCYGAPP 525

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           H GIA G+DR++ML+ G +++RE+  FPM++N  D++MG+P+TV  +QL ++ + IV+  
Sbjct: 526 HAGIAPGVDRMIMLICGEESIREIIPFPMNKNAMDVMMGAPATVDQKQLDDVHIAIVKER 585

Query: 596 KK 597
           ++
Sbjct: 586 EE 587


>gi|121591625|ref|ZP_01678871.1| aspartyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121546519|gb|EAX56729.1| aspartyl-tRNA synthetase [Vibrio cholerae 2740-80]
          Length = 540

 Score =  528 bits (1361), Expect = e-148,   Method: Composition-based stats.
 Identities = 203/547 (37%), Positives = 301/547 (55%), Gaps = 9/547 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVD--LGDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLLKDVDFKVFSGPANDPKGRVAALRIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L     +AI  R   Q GD   F A             R    +E
Sbjct: 357 LAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LGI N + +   W++DFP +E +++E  +   H+PFT P          +     +  YD
Sbjct: 417 LGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYD 475

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+E+  G +R H +E+    F  +GI+ E     +    R  + G      +A G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQSAVFDILGITPESTSQVW-FPARCAEVGTHTR-SLAFGL 533

Query: 544 DRIVMLL 550
           DR+VMLL
Sbjct: 534 DRLVMLL 540


>gi|187918313|ref|YP_001883876.1| aspartyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|238689288|sp|B2S0F0|SYD_BORHD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119861161|gb|AAX16956.1| aspartyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 585

 Score =  528 bits (1361), Expect = e-148,   Method: Composition-based stats.
 Identities = 213/589 (36%), Positives = 332/589 (56%), Gaps = 9/589 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++T  C  +    V   + ++ WV ++R HG + F+++RD Y   QV+ + D    +I 
Sbjct: 1   MFKTIRCNQINDKLVNQRIEINAWVKKIRHHGKVTFINLRDRYDEAQVLVS-DENLLKIT 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             ++ E+ + + G +  R  E  N  + TG  E+ A+ I+I+S   ELP  +       +
Sbjct: 60  SQIKMEYCIKVQGTLELRPLELANKEMKTGAFEILAENIDIISRCNELPFMIEDNNNAND 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + +YR+LDLRR+   + I+ R+++ + +R  +  ++F+E  TP    S+PEGARDFLV
Sbjct: 120 NAKLEYRYLDLRREEQKQKIILRSKVTHIIRNYLTKKDFLELETPTFVKSTPEGARDFLV 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++G FYALPQ+PQ YKQL M +G D+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGHFYALPQSPQIYKQLTMVAGLDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++++I   MEN++  +F+   N   +   F ++ Y  A+  YG+DKPD R  +++ ++
Sbjct: 239 FIKKENIFKLMENLMFTIFKNTLNI-ALPKKFKKMTYKHAMNTYGSDKPDTRYELLIQDM 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++HF  S F VF  +L      +   I  +    +R+  + + E A+     GL +    
Sbjct: 298 SKHFKKSSFNVFQDMLQNKGTIKALIIKNQAHNFSRSKINNLEEHAKIYKARGLYFAKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E       G +AK LN +  + +     + + D  FFIA      C      R  IA 
Sbjct: 358 NNE-----FSGGIAKFLNEI-KQTLIEAYSLANNDIIFFIADSWETACKAMGQVRIKIAT 411

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +IN N FEF WI DFP +E++E+ K    AH+ F++P+        ++   +    Y
Sbjct: 412 ELNLINKNIFEFLWIYDFPLFEYDEDTKSYQAAHHMFSLPKQKYIHTLESNPSKVLGEVY 471

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+ SG IR H  E+  + F+ VG   E+ E RFG   +A + G P HGGIA G
Sbjct: 472 DLVLNGMELGSGSIRVHTRELQQRIFNIVGFKNEIAEERFGFFLKALEYGAPIHGGIAIG 531

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           IDR++ML+  + ++++V LFP +      L  SPS +S EQLREL L I
Sbjct: 532 IDRLLMLMTHSSSIKDVILFPKNSFAASPLDKSPSRISNEQLRELNLTI 580


>gi|213019656|ref|ZP_03335461.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212994697|gb|EEB55340.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 551

 Score =  528 bits (1361), Expect = e-148,   Method: Composition-based stats.
 Identities = 266/557 (47%), Positives = 371/557 (66%), Gaps = 19/557 (3%)

Query: 50  VVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE- 108
           +V N D   F+   +++SE V+ + G+V +R+ +T+N++I TG+IE+    +++ S  E 
Sbjct: 1   MVFNNDKDFFDEISNLKSESVITVTGIVKARTEDTVNSSISTGEIEVIVSNLQVESEVEF 60

Query: 109 -----------ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157
                       +   + GE+EYPE++RFKYRFLDLRR+ +  NI+ R++II+ +R  MI
Sbjct: 61  HCDEEIAKEERSILASIAGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIISELRRLMI 120

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
            + F++  TPILTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIA
Sbjct: 121 EQGFLDIQTPILTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIA 180

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           PCFRDED R+DR PGEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F RI
Sbjct: 181 PCFRDEDARADRSPGEFYQLDLEMSFVTQEDIFQVIESTLYKVFAKFS-RKSVDKDFPRI 239

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y +A+ +YG+DKPDLRNP+++ +VTE F  SEF +F   +           P K     
Sbjct: 240 TYKEAMLKYGSDKPDLRNPLLISDVTEIFRDSEFNIFKSNIERGMVVRAIPAP-KTAEEP 298

Query: 338 RAFCDRMNEWA-RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
           R+F D+  E A +  G  GL YI +  D        GP+AK L+     +I+   +++ G
Sbjct: 299 RSFFDKKIEHAQKEFGAKGLGYITFDKDGIAK----GPIAKFLDDNRLNSIKEITNVKPG 354

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           DS FF +    +  + A   R  +  ELG+I+ + F+FCWI+DFP++ ++++ KKIDF H
Sbjct: 355 DSVFFASDKENEAATIAGKVRTLLGSELGLIDDDIFKFCWIIDFPYFVYDDKSKKIDFFH 414

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           NPF+MP GG++ L+  D L I A+QYDLVCNG E++SG IRN+   +M +AF+  G SKE
Sbjct: 415 NPFSMPHGGLKDLEEKDPLDILAYQYDLVCNGIELSSGAIRNNKLNIMYRAFAIAGYSKE 474

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
            V+ +FG L RAF+ G PPHGGIA G+DR+VMLL    N+REV  FPM+Q   D+LMG+P
Sbjct: 475 EVDTKFGALVRAFRFGAPPHGGIAPGVDRMVMLLADEPNIREVICFPMNQQGEDVLMGAP 534

Query: 577 STVSVEQLRELGLRIVE 593
           S V  + LREL L++VE
Sbjct: 535 SKVDDKHLRELSLKVVE 551


>gi|162447681|ref|YP_001620813.1| aspartyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|161985788|gb|ABX81437.1| aspartyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 567

 Score =  528 bits (1359), Expect = e-147,   Method: Composition-based stats.
 Identities = 214/593 (36%), Positives = 336/593 (56%), Gaps = 26/593 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M  Y +H   +L + ++   V L GWV +VR  GG+IF+D+RD YGITQ+V  P++A +E
Sbjct: 1   MSTY-SHHNNELTIKNLNETVFLKGWVSKVRNLGGLIFMDLRDQYGITQLVVRPNTALYE 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  VRSE+V+ + G+V+ R  E+ N  + TG IE+   ++ IL+ A   P+ +  +   
Sbjct: 60  RASQVRSEYVVEVKGIVIER--ESKNKFMTTGDIEIDVTELNILNTAMTTPITISEQDNI 117

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLR+ T    +++R++I  S+R  ++  NF+E  TP L  ++PEGA++F
Sbjct: 118 SEEVRLKYRYLDLRKPTSKNYLLQRSKITQSIRNSLLNNNFLELETPYLVKTTPEGAKEF 177

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR+  G  YAL Q+PQ +KQL M SGF++YFQ A CFRDED R+DR   EF Q+D+E
Sbjct: 178 IVPSRLYHGEGYALAQSPQMFKQLYMVSGFEKYFQFARCFRDEDLRADRQL-EFTQIDIE 236

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ Q+DI+   E ++  +F++      +     R+ Y DA   YG+DKPDLR  + + 
Sbjct: 237 ASFITQEDIMKLGEEMMSNMFKDILGKE-LKLPIARLTYQDAFDMYGSDKPDLRYELKIE 295

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++T+        +F    S+                 R + D++ E  +      LAY+ 
Sbjct: 296 DLTDKLSTYHVPLFESKASLRGFT-----LPNNALFTRKYFDKLTEIVKKNHGDTLAYVK 350

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               E G ++  G V+K  +              DG + F + G      +     R  +
Sbjct: 351 ---HEGGQLS--GSVSKFFDENVVA---------DGYTLFIVPGTYEGATNACGALRKEL 396

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++LG I+       WI+DFP +E++EE++++   H+PFT P+  +E  + N      A 
Sbjct: 397 AKDLGYIDETLESLVWIVDFPLFEYSEEDQRLYARHHPFTAPK-DLEDFRNN-PKDTLAK 454

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G +R +  EV  + F  +G ++E + N+FG    A + G PPHGGIA
Sbjct: 455 AYDLVWNGYEVGGGSMRIYNQEVQNEMFEKLGFTQEEIRNKFGFFIDALKYGTPPHGGIA 514

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            G+DRIVML     N+R+V  FP +Q+  D++M SPS +   QL +LGL++++
Sbjct: 515 FGLDRIVMLATKTDNIRDVIAFPKTQSARDIMMESPSPIDKLQLEDLGLKVIK 567


>gi|121535604|ref|ZP_01667411.1| aspartyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121305844|gb|EAX46779.1| aspartyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 510

 Score =  527 bits (1358), Expect = e-147,   Method: Composition-based stats.
 Identities = 208/509 (40%), Positives = 294/509 (57%), Gaps = 10/509 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RTH CG+L     G  V L GWV R R HGG+IF+D+RD  GI QVV  P  D   F  
Sbjct: 8   KRTHYCGELRKEHGGQEVVLCGWVARRRDHGGLIFIDLRDRSGIVQVVFAPEMDQEAFRK 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+  R+E+VL + G V  RS  T+N NI TG+IE+  +++ +L+ A+  P  +    +  
Sbjct: 68  AELARNEYVLAVRGTVKVRSEATVNPNIPTGEIEVYCREVRLLNAAKTPPFYIQDNIDVD 127

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R KYR+LDLRR  + +N++ R R+  +MR       F+E  TP+LT S+PEGARD+L
Sbjct: 128 ELLRLKYRYLDLRRPEMQRNLILRHRVTKAMRDFFDRHGFVEVETPMLTKSTPEGARDYL 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ +KQ+LM +G DRYFQIA CFRDED R+DR P EF QLD+EM
Sbjct: 188 VPSRVNPGKFYALPQSPQIFKQILMVAGLDRYFQIARCFRDEDLRADRQP-EFTQLDVEM 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFVE+DD+LN ME ++  +F+E      V   F R+ YD+A+ RYGTDKPD R  + + +
Sbjct: 247 SFVERDDVLNLMEEMIAFIFKEAIGAT-VPLPFPRLSYDEAMARYGTDKPDTRFGMELID 305

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++     S+F+VF  +L  N   +   +        R   D + E+  + G  GLA+I +
Sbjct: 306 ISSAVQGSDFKVFQSVLDQNGQVKAINVKGY-ANIPRRELDGLVEYVANFGAKGLAWICY 364

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                 +     P+AK  +      I      Q GD    +A  P    +     R  +A
Sbjct: 365 T-----DEGIKSPIAKFFSDDIMRRITEVTQAQPGDLLLMVADRPAVVATALGQLRLEMA 419

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L +I+ N   F W++DFP +E++EEE++    H+PFT P+       G+D   IKA  
Sbjct: 420 RRLNLIDPNKLSFLWVLDFPMFEYDEEERRWVAMHHPFTSPRDEDVEFLGSDPARIKAKA 479

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           YD+V NG EI  G IR +  ++  + F+ 
Sbjct: 480 YDMVLNGTEIGGGSIRIYNRDLQEKVFAA 508


>gi|328945671|gb|EGG39822.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 578

 Score =  527 bits (1357), Expect = e-147,   Method: Composition-based stats.
 Identities = 193/584 (33%), Positives = 318/584 (54%), Gaps = 12/584 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    +   F   + +  E
Sbjct: 6   IGNYGLEQVGQTMTATGWVANIRNHGKLAFIELRDREGLLQVFVGGEIEDFAKLEDIGKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R    +N  I +GQ+EL A+KIE+++ ++ LP  +       E +R KY
Sbjct: 66  DVIAVTGQVVQREERFVNKAIKSGQVELRAEKIEVIASSKALPFELDQHAHTGEDLRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++ +++R  +   +F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTHNLKLRHQVTSTIREYLNDLDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+E+SF  +++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLELSFASEEE 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++ ++   ++  F  I Y++A+ R+G+DKPD R  + +  +T+    
Sbjct: 245 IRALVEAMLKAVVKK-THSLELTEAFPTISYEEAMSRFGSDKPDTRFGLELKTLTDLCQS 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++  +  K L          +P      ++       +  +  G    A +     E+G 
Sbjct: 304 NDSLLIKKALDNQEKVMGICVPDAASAFSKKQLSHYYQEMKEFGCSRFANLKV---ENGQ 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +G +A       ++ +  R + +DGD    +     +        R  +A+ L +I+
Sbjct: 361 L--VGDLASTF-EAESQDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLID 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +   F W++D+P  E NE++ +    H+PFT            +    ++  YD+V NG
Sbjct: 418 PSLLHFLWVVDWPLLERNEDQNRYQAMHHPFTQGIFEDRQ----EPDQFRSHAYDIVLNG 473

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+S+E  E  FG    A + G PPHGG+A G+DR+VM
Sbjct: 474 YEIGGGSLRIHDRKAQEAMFELLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVM 533

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +L G +N+R+V  FP +    D ++ SPS V + QL+EL L + 
Sbjct: 534 ILAGEENIRQVIAFPKNGTGFDPMLESPSLVDLRQLKELHLELK 577


>gi|73961347|ref|XP_547457.2| PREDICTED: similar to aspartyl-tRNA synthetase 2 (mitochondrial)
           [Canis familiaris]
          Length = 652

 Score =  527 bits (1357), Expect = e-147,   Method: Composition-based stats.
 Identities = 195/614 (31%), Positives = 317/614 (51%), Gaps = 25/614 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +   +FL +RD +G+ QVV   D +   + K 
Sbjct: 48  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---VFLVLRDSHGLIQVVIPQDESAASVKKI 104

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 105 LCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNSCKKLPFEIKDFVKKT 164

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 165 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDVETPTLFKRTPGGAKEF 224

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           ++PSR   G FY LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 225 VIPSR-EPGKFYCLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 282

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I + +E +L+  +   S+ + V   F  + + +A+  YGTDKPD R  + + 
Sbjct: 283 MSFVDQTGIQSLIEGLLQYSW--PSDKDPVVVPFPSMTFAEALASYGTDKPDTRFGMKIV 340

Query: 301 NVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           +++  F ++E       LS      +   I        R   + + ++A       +  I
Sbjct: 341 DISNVFRNTEVGFLQDALSKPQGTVKAMCISEGAKYLKRKDIESIRKFAADHFNQEVLPI 400

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F + + + N     PVAK +       +   +++Q+ D     AG+  K CS     R  
Sbjct: 401 FLKANRNWN----SPVAKSIMEEQRSGLTRLMEIQEDDVVLLTAGEHKKACSVLGKLRLE 456

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE+ +K++ AH+PFT P      L  ++
Sbjct: 457 CADLLEARGLVLRDPALFSFLWVVDFPLFLPKEEKPEKLESAHHPFTAPHPSDVQLLYSE 516

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +++  YDLV NG EI  G IR H +E+     + +      +      L +A + G 
Sbjct: 517 PEKVRSQHYDLVLNGNEIGGGSIRIHDAELQRYILAELLKEDVKL---LSHLLQALEFGA 573

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR++ L+ GA ++R+V  FP S    DL+  +P ++  E+L+   +++  
Sbjct: 574 PPHGGIALGLDRLICLVTGAPSIRDVIAFPKSFRGHDLMSNAPDSLPPEELKPYHIQVSW 633

Query: 594 NPKKILKISVTTIL 607
                 K S     
Sbjct: 634 PADSEAKKSSLNQP 647


>gi|203284356|ref|YP_002222096.1| aspartyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|238690563|sp|B5RM04|SYD_BORDL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|201083799|gb|ACH93390.1| aspartyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 585

 Score =  526 bits (1356), Expect = e-147,   Method: Composition-based stats.
 Identities = 211/594 (35%), Positives = 337/594 (56%), Gaps = 9/594 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++   C  +    +   + ++GWV ++R HG + F++IRD Y   Q++ + D    +I 
Sbjct: 1   MFKIIKCNQINNKLINKKIEINGWVKKIRNHGKVTFINIRDRYDEAQILVS-DEKLLKIT 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             ++ E+ + I G +  R  E +N  + TG++E+ A+ I+I+S   ELP  +       +
Sbjct: 60  SQIKMEYCIKIQGKLNLRPLELVNREMKTGELEIIAENIDIISKCNELPFMIENNNNASD 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + +YR+LDLRR+   + I+ R+++I+ +R  +  ++F+E  TP    S+PEGARDFLV
Sbjct: 120 NSKLEYRYLDLRREEQKQKIILRSKVIHIIRNHLTKQDFLELETPTFVKSTPEGARDFLV 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++G FYALPQ+PQ YKQL M +G D+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGHFYALPQSPQIYKQLAMIAGLDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++++I   +EN++  +F+   N   +   F +I Y DA+  YG+DKPD R  +++ ++
Sbjct: 239 FIKKENIFKLIENLIFTIFKNSLNIT-LPKKFKKITYKDAMNIYGSDKPDTRYELLIQDM 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++    S F VF   L      +   I  +    +R+  + + E A+      L +    
Sbjct: 298 SKALKQSPFDVFKDTLQNKGTIKALIIKNQAHNFSRSKINSLEEHAKLYKARTLYFTKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E       G +AK +N +  + +     +++ D  FFIA      C      R  IA 
Sbjct: 358 NNE-----FTGGIAKFINPI-KKTLIETYSLKNNDLIFFIADLWETACKAIGQIRIKIAT 411

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +IN N FEF WI DFP +E++E+ +    AH+ F+MPQ    +   ++   +    Y
Sbjct: 412 ELNLINKNIFEFLWIYDFPLFEYDEDTQSYKAAHHMFSMPQAKYINTLESNPSEVLGEVY 471

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+ SG IR H  E+  + F+ VG + ++ E RFG   +A + G P HGGIA G
Sbjct: 472 DLVLNGTELGSGSIRVHTKELQQRIFNIVGFNDKIAEERFGFFLKALEYGAPIHGGIAIG 531

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IDR++ML+  + ++++V LFP +      L  SPS +S EQL+EL L I  N  
Sbjct: 532 IDRLLMLMTNSNSIKDVILFPKNSFAASPLDKSPSKISNEQLKELNLTIENNKN 585


>gi|94968233|ref|YP_590281.1| aspartyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550283|gb|ABF40207.1| aspartyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 601

 Score =  526 bits (1356), Expect = e-147,   Method: Composition-based stats.
 Identities = 226/600 (37%), Positives = 332/600 (55%), Gaps = 17/600 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIA 62
            RTH CG+L  +D    V L GWV+R R  GG+IF+D+RD  GITQ+V +  +S     A
Sbjct: 11  KRTHKCGELRAADANKNVVLMGWVNRRRDLGGLIFIDLRDRTGITQIVFDNSNSELQAKA 70

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +RSE+ + + G V  R A T+N N+ TG+IE+ A+++ + + ++ LP  +       E
Sbjct: 71  GDLRSEYCIAVIGTVAKREANTVNKNLPTGEIEVVAKEMRLFNDSKVLPFSIADNSNVNE 130

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +  N+  R  +  ++R  + ++NF+E  TPI+T S+PEGARD+LV
Sbjct: 131 EVRLKYRYLDLRRPEMQANVQMRHDVTFAIRNYLASQNFLEVETPIMTRSTPEGARDYLV 190

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQ+LM S  +RYFQIA CFRDED R+DR P EF Q+D+EM+
Sbjct: 191 PSRVHPGEFYALPQSPQIFKQILMISNCERYFQIARCFRDEDLRADRQP-EFTQIDLEMT 249

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  QDD+   +E  L   +   + G+ +   F R+ YDDAIR+YG DKPDLR P  M++V
Sbjct: 250 FPTQDDVFGVVEGFLTAAWA--AAGHKLEGKFPRMSYDDAIRQYGIDKPDLRLPA-MNDV 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE-WARSQGQPGLAYIFW 361
              F     +     L +     V     K G  +R   D +        G     +  +
Sbjct: 307 KSAFAAENLQTLGIDLDLP---VVCVRVPKIGELSRKERDDLKPMLNAKSGAK--LFEDF 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC--FFIAGDPLKFCSFAADARNH 419
           +  E         + + +    ++ + V    Q  +                 A   R  
Sbjct: 362 KRLEKSFPEAAAKIKEIVKPEESDLLVVVAGAQRAEKASEIVTRNQSYAVYGAAGQVRLA 421

Query: 420 IAQEL----GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           IAQ+     G      F+F W+ DFPF+EW+E +K+ + AH+PFT           +D  
Sbjct: 422 IAQKYSDRHGCFKKGEFKFLWVTDFPFFEWDENDKRWNAAHHPFTSCHEEDMGKLESDPG 481

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            ++A  YD+V NG E+ SG IR H  ++    F ++G+  E  + RFG    A Q G PP
Sbjct: 482 GVRALAYDVVLNGTELGSGSIRIHRQDIQSIIFKSLGMGPEEQQQRFGFFLEALQYGTPP 541

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DRIVM+L GA ++REV  FP +    DL+M +P+ VS EQL++L +++ +  
Sbjct: 542 HGGIALGLDRIVMILAGATSLREVITFPKTAAATDLMMDAPTPVSAEQLQQLNIKVTKRE 601


>gi|88803543|ref|ZP_01119068.1| aspartyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88780555|gb|EAR11735.1| aspartyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 1115

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 218/602 (36%), Positives = 332/602 (55%), Gaps = 16/602 (2%)

Query: 2    HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACF 59
              YRTH+   L  + +   V LSGWV  VR HG +IF+D+RD       V  +       
Sbjct: 521  EEYRTHTVSQLSEASINQKVTLSGWVSSVRDHGELIFIDLRDSSTQIFQVRLSRETFPNL 580

Query: 60   EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
            +    ++ E V+ + G+V+ R+ +  NA + TG++EL    +EIL++++ LP  +    +
Sbjct: 581  DELVKLKPESVISVTGIVLQRNEDDYNAGLRTGKLELETTDLEILNLSKTLPFEIKRAFK 640

Query: 120  YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
              E +RF+Y+FLD R D + + IV R ++I  +R  +  E F+E  TPILTA + EGAR+
Sbjct: 641  SNEKVRFEYKFLDHRNDEVRRAIVNRHKVIKLLRDLLDEEEFLEIETPILTAGTDEGARE 700

Query: 180  FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
            F+VP+R   GSFY LPQAPQQ+KQ+LM  GF++YFQIA CFRDED R DR P EF QLD+
Sbjct: 701  FIVPTRKQVGSFYTLPQAPQQFKQMLMVGGFEKYFQIARCFRDEDSRGDRQP-EFTQLDL 759

Query: 240  EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            EM+FV    I++    +   V  +      V   F  I Y +A+ +YG D+PDLR  + M
Sbjct: 760  EMAFVSMQQIIDLNTRLFNEVVRKIYGKKWVLYPFEVITYKNAMDKYGCDRPDLRYGLQM 819

Query: 300  HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK---GGGGNRAFCDRMNEWARSQGQPGL 356
             ++T     + F+VFSK ++     +   + AK   G   ++   + +   A+  G  GL
Sbjct: 820  QDITSIVKETSFQVFSKPIADGGIVKCIKVSAKEQGGKRMSKGQIESLTTIAQQNGLGGL 879

Query: 357  AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            AYI     +        P+ K L     + I      + GD  FF A D           
Sbjct: 880  AYIIVNEHD-----LQSPIIKFLGEEIAKNIIQFTAAKVGDIVFFSAADYATANKALDAV 934

Query: 417  RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMESLKGN 472
            R  + + L ++N       W++DFP +E   +E +  F HNPF+MP         ++KG+
Sbjct: 935  RQEMGRVLNLVNPKELRPAWVIDFPMFEKT-DEGRWTFTHNPFSMPAIYDLEKHMNVKGD 993

Query: 473  DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++ +I A QYDL+ NG+EI  G +R H SE++   + N+G + E +    G +++AFQ G
Sbjct: 994  EIGTIIAQQYDLILNGYEIGGGSVRAHKSEILEATYRNMGYTHEEMMKSVGTMHKAFQYG 1053

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
             PPHGGIA GIDR++M+L    ++REV  FP +    DLL  +PS +S +++ E+ +RI+
Sbjct: 1054 APPHGGIAWGIDRLMMILEKKASIREVMAFPKTGASEDLLFNAPSPLSDKKVEEMNVRII 1113

Query: 593  EN 594
              
Sbjct: 1114 RK 1115


>gi|225376540|ref|ZP_03753761.1| hypothetical protein ROSEINA2194_02182 [Roseburia inulinivorans DSM
           16841]
 gi|225211639|gb|EEG93993.1| hypothetical protein ROSEINA2194_02182 [Roseburia inulinivorans DSM
           16841]
          Length = 608

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 260/602 (43%), Positives = 373/602 (61%), Gaps = 21/602 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACF 59
           M + RTH+C +L +SD G  V + GW   +R     + FL +RD YG TQVV   +    
Sbjct: 22  MIQSRTHNCNELRLSDAGKNVTIVGWYENIRKVSKNLGFLILRDFYGTTQVVIETEEMM- 80

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-- 117
           ++  SV  E  + + G+V  RS++  N ++ TG+IE+  +KIEIL       LP      
Sbjct: 81  QVIDSVNKESTISVTGVVRERSSK--NKDLATGEIEVVPEKIEILGKCIYNALPFEINQS 138

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           ++  E+ R KYR+LDLR   +  NIV R++I+  +R +M + NF+E +TPILT SSPEGA
Sbjct: 139 KDADENTRLKYRYLDLRNPAVKGNIVLRSKIVAELRQKMNSLNFMEITTPILTCSSPEGA 198

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVP+R + G FYALPQAPQQ+KQ+LMASGFDRYFQIAPCFRDED R+DR PGEFYQL
Sbjct: 199 RDYLVPARNHPGKFYALPQAPQQFKQILMASGFDRYFQIAPCFRDEDARADRSPGEFYQL 258

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNP 296
           DMEM+F  Q+D+ + +E VL  VFE++    T S   F+RI Y +++ +YG+DKPDLR  
Sbjct: 259 DMEMAFASQEDVFSVVEEVLPPVFEKYGVYKTASKAPFVRIPYLESMDKYGSDKPDLRID 318

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           +++ + TE      F  F           V AI   G    R   D +      Q     
Sbjct: 319 LVLQDATEVMADCGFGPFEG-------QTVKAIVVDGFTATRKVIDGICAEVEVQTANKA 371

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +  ++LDE+G +  +G ++K L     EA+   L ++ GD     AG  L     A   
Sbjct: 372 FW--FKLDENGEL--VGGISKFLQD-RKEAVIAALGLKPGDFVGLTAGKKLAAQKTAGVL 426

Query: 417 RNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           R  +       +  +C+EFCWI+DFP YE  EE  +++F HNPF+MPQGGM++L   D L
Sbjct: 427 RKLLGAASDKHMKKDCYEFCWIVDFPMYEIGEESGELEFCHNPFSMPQGGMDALNNQDPL 486

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            I A+QYDLVCNG E++SG +RNH  E+M++AF  VG+ ++ V+ +F  +Y AF  G PP
Sbjct: 487 DILAYQYDLVCNGVELSSGAVRNHDPEIMIKAFELVGLGEDDVKAKFPAMYNAFCYGAPP 546

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           H GIA G+DR++ML+ G +++RE+  FPM++N  D++MG+P+TV  +QL ++ + I + P
Sbjct: 547 HAGIAPGVDRMIMLICGEESIREIIPFPMNKNAMDIMMGAPATVEQKQLDDVHIAI-KMP 605

Query: 596 KK 597
           K+
Sbjct: 606 KE 607


>gi|256371344|ref|YP_003109168.1| aspartyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007928|gb|ACU53495.1| aspartyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 588

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 219/592 (36%), Positives = 321/592 (54%), Gaps = 23/592 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH  G L  S +   V + GWV R+R HG  ++F+D+RDH G  Q V +          
Sbjct: 13  RTHYIGALDESLLDRDVSVCGWVARIREHGEHLVFVDVRDHTGTVQCVMDGRG------- 65

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+ +E  + I+G V  R   T N ++ TG IEL  Q  E+L  A+ LPLP+    E  E+
Sbjct: 66  SLHTEAAVRIEGQVARRPEGTENTDLATGAIELRVQHAEVLGDADPLPLPLDEHAEVEET 125

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R ++R+LDLRR  + +N+  R     ++R  M A+ F+E  TP+L   +PEGAR+FLVP
Sbjct: 126 TRLRWRYLDLRRARMQRNLRARAATNAAIRRAMEAQGFVEVETPLLWTPTPEGAREFLVP 185

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR   GS Y+LPQ+PQ  KQLLM  G DRY+QIA C RDED R+DR   EF QLD+E SF
Sbjct: 186 SRTQPGSVYSLPQSPQIAKQLLMIGGVDRYYQIARCLRDEDLRADRQ-FEFTQLDLEASF 244

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V Q+D+ + +   +R V       + V      I + +A+ R+G+DKPD R  + + +VT
Sbjct: 245 VTQEDVRSFVSAAIREVIRSVRGVDDVPIGT--ITWHEAMTRWGSDKPDRRFGMELVDVT 302

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E    S  R  +        Y    + A+    +R+  D + + ARS G  GLA+  +R+
Sbjct: 303 EAVRDSGARALAA------DYVTALVVAEP--LSRSRLDELTQRARSAGAKGLAW--FRV 352

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           +    +    P+AK +     EA+  R   + GD+   +A      C+     R  + + 
Sbjct: 353 ESRTPLEIASPLAKAMTPAALEALVERTGAEVGDTILVVADRFEVACTALGTIRLALGRH 412

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L   + +  +  W++DFP +E  ++E  +  AH+PFTMP      L   + L +++  YD
Sbjct: 413 L--ADPDALDVFWVIDFPLFEGVDDEGHLVSAHHPFTMPHADDMDLLEREPLRVRSQSYD 470

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG+E+ SG IR H  ++  Q F  +G+ ++   +RFG L  AF+ G PPHGG A GI
Sbjct: 471 LVMNGWELGSGSIRIHRPDLQAQIFGLLGLDEQAAADRFGFLLDAFRFGPPPHGGFAFGI 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DR+V LLLG + +REV  FP +Q+  D + G+P  V    L  LGL      
Sbjct: 531 DRLVALLLGEETIREVIAFPKTQSGQDPMTGAPKPVDDGVLAALGLEARRRE 582


>gi|116750786|ref|YP_847473.1| bifunctional aspartyl-tRNA synthetase/aspartyl/glutamyl-tRNA
           amidotransferase subunit C [Syntrophobacter fumaroxidans
           MPOB]
 gi|116699850|gb|ABK19038.1| aspartyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 705

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 220/601 (36%), Positives = 337/601 (56%), Gaps = 32/601 (5%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSV 65
           CG+L +SDVGS V LSGWV  +R HG ++F+ +RD  G  Q V +P+      +E+A S+
Sbjct: 9   CGNLSLSDVGSEVCLSGWVDALRDHGEVLFIHLRDRTGFIQAVFSPEHTPRRVYELASSL 68

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------ 119
           RSE+ + + G V  R+ ET N +I TG+IE+  +++ IL+ +  LP P+  +        
Sbjct: 69  RSEFCVSLQGRVQRRTEETENPHIETGKIEVMVRELSILAASVVLPFPISEKAMTAGGGS 128

Query: 120 -----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                  E +R +YR+LDLRR ++  ++ KR RII   R  +    F+E  TPILT S+P
Sbjct: 129 GRADAVSEDLRLQYRYLDLRRPSMQDHLAKRYRIIKRARDFLDTRGFLEIETPILTKSTP 188

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EGARD+LVPSRV+   FYALPQ+PQ +KQLLM +GF+RYFQ+  CFRDED R +R P EF
Sbjct: 189 EGARDYLVPSRVHPKEFYALPQSPQLFKQLLMMAGFERYFQVVRCFRDEDLRPNRQP-EF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            QLDME SF++++ I    E ++  +FE    G  +   F R+ Y +A+  YG+D+PD R
Sbjct: 248 TQLDMEASFIDEEFIFELTEELVARMFE--VGGIELPRPFPRMPYGEAMETYGSDRPDTR 305

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR----S 350
             +     T+ F ++ + +F +IL      +   +  +    ++      NE+A+    S
Sbjct: 306 FDLKFIEATDIFENTRYGIFKQILQRGGRIKGINVSGQSEKLSKNVLQ--NEYAKEIVPS 363

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI-AGDPLKF 409
            G  G+ ++               + +  +     A+  R   +DGD    I        
Sbjct: 364 FGAKGMTWMRVSAG-----GLDSNIVQFFSEEEKGAVLRRFHARDGDVILMIADASHDLV 418

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMES 468
            S     R H+A  LG+I    F   W+ DFP +E  E+   +  +H+PFT P +   + 
Sbjct: 419 LSALGQLRLHLADRLGLIPPGVFHPLWVTDFPLFEATED--GVTSSHHPFTAPDRESFDP 476

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           L    LL +++  YDLV NG E+  G +R +  ++ L+ F  +G+S++ +E++FG   RA
Sbjct: 477 LDLQGLLDLRSRAYDLVVNGEELGGGSMRINKKDIQLRIFRALGLSEQEIEDKFGFFVRA 536

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
              G PPHGGIA G+DR+V ++L   ++REV+ FP +++    L  +PS V+ EQLRELG
Sbjct: 537 LDYGAPPHGGIALGLDRVVSMILRTPSIREVTAFPKNRSAYCPLTRAPSQVAQEQLRELG 596

Query: 589 L 589
           L
Sbjct: 597 L 597


>gi|171920816|ref|ZP_02931993.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|185179069|ref|ZP_02964803.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024310|ref|ZP_02996995.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518649|ref|ZP_03004088.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|188524467|ref|ZP_03004476.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195867682|ref|ZP_03079684.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198273687|ref|ZP_03206222.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554563|ref|YP_002284687.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225550875|ref|ZP_03771824.1| aspartate--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551242|ref|ZP_03772188.1| aspartate--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|171903583|gb|EDT49872.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209066|gb|EDU06109.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188018984|gb|EDU57024.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188997771|gb|EDU66868.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195659659|gb|EDX53039.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195660739|gb|EDX53994.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198249715|gb|EDY74496.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209542064|gb|ACI60293.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225379057|gb|EEH01422.1| aspartate--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225380029|gb|EEH02391.1| aspartate--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 578

 Score =  526 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 213/585 (36%), Positives = 341/585 (58%), Gaps = 12/585 (2%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
            CG +G   +   V L+GWV +VR  G ++F+D++D +GI Q+ A      F+    +  
Sbjct: 4   YCGRIGKEHLEKNVILNGWVKKVRKMGNLVFVDLKDRFGIVQIFATKQDEVFDELTQLSR 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           E V+ ++GLV+ R  ++ N  + TG+ E+ AQK+ I S A+  PL +  E +  E IRFK
Sbjct: 64  EDVINVEGLVLLR--KSPNHELKTGEFEVHAQKLLIYSKAKTPPLIIEDETDANEEIRFK 121

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           YR+LDLRRD   +    R+++  + R  + +E FIE  TPIL   +PEGARDF VP+R  
Sbjct: 122 YRYLDLRRDVNLRTFELRSKVYQTFRNYLHSEEFIETETPILAKPTPEGARDFYVPTRTK 181

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           +  FYALPQ+PQ +KQLLM +GF +YFQIA CFRDED RSDR P EF Q+D+E+SF ++ 
Sbjct: 182 K--FYALPQSPQTFKQLLMVAGFQKYFQIAKCFRDEDLRSDRQP-EFTQVDIELSFADEL 238

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
           +I   +EN+ + VF++  N + ++  F+R+ Y+ AI  YG+DKPDLR  + +  +  +F 
Sbjct: 239 EIQTLIENLFKHVFKQTINVD-LTTPFVRMSYEQAINDYGSDKPDLRFDLKLKTLDTYFK 297

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESG 367
            S+ ++F K LS N       +P      N+     + ++A+ +G  GLA+I    +E  
Sbjct: 298 TSKSQIFQKALSNNQSIRAILVP--NVNLNKKQIQSLEKFAKDKGAKGLAWISI-ENEKV 354

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
               +  + +  + V  + I     +  G +   IA +           R ++A  L + 
Sbjct: 355 IDGSLSSIKE--DHVIYQTIFKDYHLSTG-TILLIADEFDIASQSLGLVRVNLASMLNLK 411

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             N F+F WI+D+P YE+++E ++   AH+PFTMP          D  + K   YD+V N
Sbjct: 412 KPNDFKFVWIIDWPLYEYDDENQRFVAAHHPFTMPTLETLDTFDIDQKNAKGRSYDIVLN 471

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G+E+  G +R    ++  + F ++ +S E    +FG L  AF+ G+PPH GIA G+DR++
Sbjct: 472 GYEVGGGSVRIINQQIQRRMFKSINMSDEEANLKFGFLLNAFEYGVPPHCGIALGLDRLI 531

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           M+L+ ++ +R+V  FP + N  D+++ +P++++ E L+ELGL I 
Sbjct: 532 MILINSEYIRDVVAFPKNNNGVDMMLDAPASMNDEDLKELGLIIK 576


>gi|119953236|ref|YP_945445.1| aspartyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|254781718|sp|A1QZN3|SYD_BORT9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119862007|gb|AAX17775.1| aspartyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 585

 Score =  525 bits (1353), Expect = e-147,   Method: Composition-based stats.
 Identities = 211/591 (35%), Positives = 333/591 (56%), Gaps = 9/591 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++T  C  +    +   + ++ WV ++R HG + F+++RD Y   QV+ N D    +I 
Sbjct: 1   MFKTIKCNQINDKLINQKIEINAWVKKIRHHGKVTFINLRDRYDEAQVLVN-DEKLLKIT 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             ++ E+ + + G +  R +  +N  + TG  E+ A+ I I+S   ELP  +       E
Sbjct: 60  SQIKMEYCIKVQGKLELRPSNLVNKEMRTGAFEILAENINIISRCNELPFMIEDNNNANE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + +YR+LDLRR+   + I+ R+++ +++R  +  ++F+E  TP    S+PEGARDFLV
Sbjct: 120 NAKLEYRYLDLRREEQKQKIILRSKVTHTIRNYLTKKDFLELETPTFVKSTPEGARDFLV 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++G FYALPQ+PQ YKQL M +G D+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGHFYALPQSPQIYKQLTMIAGLDKYFQIARCYRDEDSRGDRQP-EFTQLDIEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++++I   MEN++  +F+   N  ++   F R+ Y  A+  YG+DKPD R  +++ ++
Sbjct: 239 FIKKENIFKLMENLIFTIFKNTLNI-SLPKKFKRMTYKHAMNTYGSDKPDTRYELLIQDM 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            ++F  S F VF  IL      +   I  +    +R+  + + E A+     GL +    
Sbjct: 298 GKYFKQSSFNVFKDILQNKGTIKALIIKNQAHNFSRSKINNLEEHAKIYKTSGLYFAKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E      +G +AK LN +  + +     +++ D  FFIA      C      R  IA 
Sbjct: 358 NNE-----FVGGIAKFLNKI-KQTLFQTYSLKNNDIIFFIADSWETACKAMGQIRIKIAN 411

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL + N N FEF WI DFP +E++E+ K    AH+ F++PQ        ++   +    Y
Sbjct: 412 ELNLTNKNTFEFLWIYDFPLFEYDEDTKNYKAAHHMFSLPQQKYIDTLESNPSKVLGEVY 471

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+ SG IR H  E+  + F+ VG    + E RFG   +A + G P HGGIA G
Sbjct: 472 DLVLNGMELGSGSIRVHTRELQQRIFNIVGFKDTIAEERFGFFLKALEYGAPIHGGIAIG 531

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           IDR++M++  + ++++V LFP +      L  +PS V  EQLREL L I +
Sbjct: 532 IDRLLMIMTHSSSIKDVILFPKNSFAASPLDKAPSKVPNEQLRELNLTIED 582


>gi|156121091|ref|NP_001095692.1| aspartyl-tRNA synthetase, mitochondrial precursor [Bos taurus]
 gi|182689573|sp|A6QPU5|SYDM_BOVIN RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; Flags:
           Precursor
 gi|151554225|gb|AAI49493.1| DARS2 protein [Bos taurus]
          Length = 651

 Score =  525 bits (1352), Expect = e-147,   Method: Composition-based stats.
 Identities = 194/598 (32%), Positives = 313/598 (52%), Gaps = 25/598 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +   IFL +RD +G+ QVV   D +   + K 
Sbjct: 47  RTNTCGELRSSHLGQEVTLCGWIQFRRQN---IFLVLRDFHGLVQVVIPQDESAASVKKI 103

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  ++L+  ++LP  +    +  
Sbjct: 104 LCEAPMESVVQVSGTVISRPPGQKNPKMPTGEIEIKVKTAKLLNSCKKLPFEIKDFMKKT 163

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 164 ETLRLQYRYLDLRSVQMQYNLRLRSQMVMKMREYLCNLHGFVDVETPTLFKRTPGGAKEF 223

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           ++PSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 224 VIPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 281

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  + + +E +L+  +   S+ + +   F  + + +A+  YGTDKPD R  + + 
Sbjct: 282 MSFVDQTGVQSLIEGLLQYSW--PSDKDPLVVPFPSMPFAEALASYGTDKPDTRFGMKIV 339

Query: 301 NVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F ++E       LS      +   I        R   + + ++A       +  I
Sbjct: 340 DISDMFRNTEVGFLQDALSKPQGTVKAICIRKGAKYLKRKDIESIRKFAADHFNEEVLPI 399

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F + +E+ N     PVAK +       +   L+ Q+ D     AG+  K CS     R  
Sbjct: 400 FLKTNENWN----SPVAKFIMEEQGLGLVKLLETQEEDVVLLTAGEHKKACSLMGKLRLE 455

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE  ++++ AH+PFT P      L   +
Sbjct: 456 CADLLEARGVVLRDPALFSFLWVVDFPLFLPKEENPQELESAHHPFTAPHPSDIHLLYTE 515

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +++  YDLV NG EI  G IR H SE+       V      +      L +A   G 
Sbjct: 516 PHKVRSQHYDLVLNGNEIGGGSIRIHNSELQHCVLDTVLKEDVKL---LSHLLQALDYGA 572

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGGIA G+DR++ L+ GA ++R+V  FP S    DL+  +P ++  E+L+   +++
Sbjct: 573 PPHGGIALGLDRLMCLVTGAPSIRDVIAFPKSFRGHDLMSNAPDSIPPEELKPYHIQV 630


>gi|26553741|ref|NP_757675.1| aspartyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|38372528|sp|Q8EWB7|SYD_MYCPE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|26453748|dbj|BAC44079.1| aspartyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 580

 Score =  525 bits (1352), Expect = e-147,   Method: Composition-based stats.
 Identities = 219/587 (37%), Positives = 328/587 (55%), Gaps = 15/587 (2%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
            CG++    VG  V + GW+ + R  G +IF+DI D  GI QVV   ++  F        
Sbjct: 8   YCGNVDNKLVGKEVVIKGWIKKNRKLGSLIFIDIYDITGIVQVVVEEENKFFNNCLQTPK 67

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           E V+ + G+V  RS   +N  + TG+ E+  ++ ++ S AE  P  +  + +  E +R K
Sbjct: 68  ESVVEVIGIVRKRS--NVNKELKTGEFEIDLKEFKLYSKAETPPFLIQDDTDGLEDLRLK 125

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           YR+LDLRR  +  NI+ R +IIN  R  ++  NF E  TP L+  +PEGARD+LVP+R  
Sbjct: 126 YRYLDLRRPVMQNNIINRGKIINLFRSFLVKNNFNEIETPYLSKQTPEGARDYLVPTR-- 183

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
              F+ALPQ+PQ YKQLLM SG DRYFQIA CFRDED R+DR P EF Q+D+E SF+   
Sbjct: 184 SKKFFALPQSPQIYKQLLMVSGMDRYFQIARCFRDEDLRADRQP-EFTQIDIETSFLSDL 242

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
           +I + ++ +   VF+EF N   +   F R+ Y DAI  YG+DKPD+R    + N+T +F 
Sbjct: 243 EIQSIVQEMFIYVFKEFFNIK-LKTPFTRMSYSDAIEYYGSDKPDIRFENKIMNLTNYFK 301

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESG 367
            + F++F  I           +        +    ++ + A+     GLAY++    E+G
Sbjct: 302 DTNFKIFKSIYESKNRISAVFVE---DNIVKQDIKKLEKLAQDNKAKGLAYLYI---ENG 355

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
            ++  G +A  +     E I     + +G + FF+A             R         I
Sbjct: 356 KMS-SGSIANVIESEIIEKICKDNKLSNG-TLFFVADKYEITQQALGAIRKEFVNISKKI 413

Query: 428 NCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
             N  F F W++D+P +E++EEEK+   AH+PFTMP          D  + KA  YDLV 
Sbjct: 414 KMNEEFAFLWVVDWPLFEYSEEEKRYVSAHHPFTMPTAETLDTFDKDPANAKAIAYDLVL 473

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           NGFEI  G +R + SE+  + F  +G++   V+ +FG +  AF+ G+PPHGGIA GI+RI
Sbjct: 474 NGFEIGGGSLRIYNSELQTRMFKFLGLNDSQVKEKFGFIINAFKYGVPPHGGIAFGIERI 533

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +M++L   ++R+V  FP + +  DLL  +PS VS E L+ELG+++ +
Sbjct: 534 LMIMLNTNSIRDVIAFPKNSSGVDLLFETPSDVSNESLKELGIKLEK 580


>gi|224531685|ref|ZP_03672317.1| aspartyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511150|gb|EEF81556.1| aspartyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 586

 Score =  525 bits (1352), Expect = e-147,   Method: Composition-based stats.
 Identities = 216/591 (36%), Positives = 332/591 (56%), Gaps = 10/591 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++   C +L    +   V ++ WV ++R HG   FL+IRD Y   QV+   +    +IA
Sbjct: 1   MFKVIKCNELNEKLINKKVEINAWVKKIRHHGKFTFLNIRDRYEKAQVLITKE-HLLKIA 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++ E+ + I G+++ R +  IN N+ TG  E+ A+ IEI+S   ELP  +  +    E
Sbjct: 60  EKIKLEYCIKIQGILIKRPSNMINTNMKTGHFEILAKNIEIISKCNELPFMIEDDNNASE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + +YR+LDLRRD+L   I+ R    + +R  ++   F+E  TP    S+PEGARDF++
Sbjct: 120 NSKLEYRYLDLRRDSLKNKIILRCHATHLIRNFLVKRKFLELETPTFVKSTPEGARDFVI 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++++I   +EN+L  +F+   N N        I Y  A+ +YG+DKPD R  + + ++
Sbjct: 239 FVKKENIFKLIENMLFSIFKNCLNINLPKKFKK-ITYKKAMNKYGSDKPDTRFELELQDI 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           + +  +SEF  F   L      ++  +  K    +RA  + + E A+     GL +    
Sbjct: 298 SRNLKNSEFNEFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTRGLYFTKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-IAGDPLKFCSFAADARNHIA 421
                N    G +AK L     + I+    +++ D  FF         C      R  IA
Sbjct: 358 -----NNKFSGGIAKFLKTEEQQLIKT-YSLENNDIIFFTANNKWETACKAMGQIRIKIA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +LG+I+ N FEF W+ DFP +E++E  K    AH+ F++P+    +    +        
Sbjct: 412 NDLGLIDENKFEFLWVYDFPLFEYDENTKTYTPAHHMFSLPKKRYITNLEKNPNKAIGEI 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  ++  + F+ +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGIELGSGSIRIHNKKLQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ I 
Sbjct: 532 GIDRLIMLMTKSISIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIA 582


>gi|296479006|gb|DAA21121.1| aspartyl-tRNA synthetase, mitochondrial precursor [Bos taurus]
          Length = 651

 Score =  525 bits (1352), Expect = e-146,   Method: Composition-based stats.
 Identities = 194/598 (32%), Positives = 313/598 (52%), Gaps = 25/598 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +   IFL +RD +G+ QVV   D +   + K 
Sbjct: 47  RTNTCGELRSSHLGQEVTLCGWIQFRRQN---IFLVLRDFHGLVQVVIPQDESAASVKKI 103

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  ++L+  ++LP  +    +  
Sbjct: 104 LCEAPMESVVQVSGTVISRPPGQKNPKMPTGEIEIKVKTAKLLNSCKKLPFEIKDFMKKT 163

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 164 ETLRLQYRYLDLRSVQMQYNLRLRSQMVMKMREYLCNLHGFVDVETPTLFKRTPGGAKEF 223

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           ++PSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 224 VIPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 281

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  + + +E +L+  +   S+ + +   F  + + +A+  YGTDKPD R  + + 
Sbjct: 282 MSFVDQTGVQSLIEGLLQYSW--PSDKDPLVVPFPSMPFAEALASYGTDKPDTRFGMKIV 339

Query: 301 NVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F ++E       LS      +   I        R   + + ++A       +  I
Sbjct: 340 DISDMFRNTEVGFLQDALSKPQGTVKAICIRKGAKYLKRKDIESIRKFAADHFNEEVLPI 399

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F + +E+ N     PVAK +       +   L+ Q+ D     AG+  K CS     R  
Sbjct: 400 FLKTNENWN----SPVAKFIMEEQGLGLVKLLETQEEDVVLLTAGEHKKACSLMGKLRLE 455

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE  ++++ AH+PFT P      L   +
Sbjct: 456 CADLLEARGVVLRDPALFSFLWVVDFPLFLPKEENPQELESAHHPFTAPHPSDIHLLYTE 515

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +++  YDLV NG EI  G IR H SE+       V      +      L +A   G 
Sbjct: 516 PHKVRSQHYDLVLNGNEIGGGSIRIHNSELQHYVLDTVLKEDVKL---LSHLLQALDYGA 572

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGGIA G+DR++ L+ GA ++R+V  FP S    DL+  +P ++  E+L+   +++
Sbjct: 573 PPHGGIALGLDRLMCLVTGAPSIRDVIAFPKSFRGHDLMSNAPDSIPPEELKPYHIQV 630


>gi|85858293|ref|YP_460495.1| bifunctional aspartyl-tRNA synthetase/aspartyl/glutamyl-tRNA
           amidotransferase subunit C [Syntrophus aciditrophicus
           SB]
 gi|97196491|sp|Q2LPW5|SYD1_SYNAS RecName: Full=Aspartyl-tRNA synthetase 1; AltName:
           Full=Aspartate--tRNA ligase 1; Short=AspRS 1
 gi|85721384|gb|ABC76327.1| aspartyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 723

 Score =  525 bits (1352), Expect = e-146,   Method: Composition-based stats.
 Identities = 215/599 (35%), Positives = 334/599 (55%), Gaps = 27/599 (4%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK---SV 65
           CG L     G  V L+GWV   R HGG++F+ +RD  GI Q+V +P++A  ++ +   S+
Sbjct: 26  CGHLTPDHTGRRVLLAGWVDAFRDHGGLLFIHLRDRNGIIQIVFSPEAASADVYRQAASL 85

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-------- 117
           R+E+ + + G V  R   T N +I TG IE+   ++ +LS +E LP  +  +        
Sbjct: 86  RAEYCVAVQGEVRKRLPGTENPHIETGDIEVFVSELTVLSESEALPFAISDKAMVAGASS 145

Query: 118 ---REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                  E +R +YR+LD+RR  + KN++ R RI   +R  + +  F+E  TP+LT S+P
Sbjct: 146 AGADHVNEDLRMQYRYLDIRRPAMQKNLILRHRISQCVREFLDSRGFVEVETPVLTMSTP 205

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EGARD+LVPSR++  SFYALPQ+PQ +KQLLM  G +RYFQ+A CFRDED R +R P EF
Sbjct: 206 EGARDYLVPSRIHPRSFYALPQSPQLFKQLLMIGGMERYFQLARCFRDEDLRPNRQP-EF 264

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            QLD+E SF++++ +   +E +   +F     G  +S  F R+ Y +A+   G+D+PDLR
Sbjct: 265 TQLDIEASFIDEEFLYELIEELTVRMFA--IGGIALSRPFPRMTYAEAMDTTGSDRPDLR 322

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA--FCDRMNEWARSQG 352
             + M +VT  F  + + +F +IL      +   I  +    ++     +   E A S G
Sbjct: 323 FGLRMADVTGVFSRTSYSIFKQILQRGGSIKGINIKGQSEKLSKNVLQNEYAKEIAPSFG 382

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCS 411
             G+ ++     E G +     + +  +    EA++    ++DGD    +A        S
Sbjct: 383 AKGMTWMRA---EEGKLE--SNIVQFFSADELEALKRVFQVEDGDVLIMVADPSCAIVNS 437

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLK 470
                R H+   LG+I    F   WI +FP +E   +E  +  +H+PFT P +   +   
Sbjct: 438 ALGQLRLHLGNRLGLIPEGVFYPVWITEFPLFEPT-DEGGVTSSHHPFTAPDRTDFDPGN 496

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             +LLS+++  YDLV NG E+  G IR +  EV  + F+ +G+++E V+N+FG   RAF 
Sbjct: 497 IEELLSLRSRAYDLVVNGEELGGGSIRINDREVQRRIFAALGLTEEDVKNKFGFFLRAFD 556

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
              PPHGG+A G+DR+V ++L   ++REV  FP +++    L G+PS V  EQL ELGL
Sbjct: 557 FAAPPHGGLALGMDRVVSMILQTPSIREVIAFPKNRSAACPLTGAPSEVKREQLAELGL 615


>gi|255284348|ref|ZP_05348903.1| aspartate--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255265090|gb|EET58295.1| aspartate--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 581

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 251/593 (42%), Positives = 362/593 (61%), Gaps = 19/593 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR  +   +  +D+G  +R++GWV  +R HGG+ F+D+RD Y + QVV    +    +  
Sbjct: 5   YRDVTLNQVSEADIGKELRIAGWVENIRDHGGVSFVDVRDMYAVMQVVLRDGA----LLD 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPE 122
            +R E  + I G+V  R  ET N  I TG IEL A +I +L  V + LP  V   RE  E
Sbjct: 61  GIRREQAVSIKGIVEKRDEETYNPKIPTGTIELEAHEITVLGGVYKNLPFEVQISREVRE 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  NI+ R+++I+ +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 121 DVRLKYRYLDLRNKKVKDNIIFRSQVISFLRQKMTELGFLEIQTPILCASSPEGARDYIV 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR  +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGEFYQLD EMS
Sbjct: 181 PSRKFKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           F  Q+++    E VL   FE+F+          +  I Y  A+  +GTDKPDLRNP+ + 
Sbjct: 241 FATQEEVFKVGEEVLTATFEKFAPEGYAVTKAPYPVISYKQAMLEFGTDKPDLRNPLRII 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +VT+ F    F+ F     +        +  K    ++ F +R+ ++A   G  GL Y+ 
Sbjct: 301 DVTDFFQKCTFKPF-----LGRTVRAIRVHEK---MSKGFHERLLKFATGIGMGGLGYLE 352

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              D+    +  GP+ K +     E       +  GD+ FF+A    +   +A   R  +
Sbjct: 353 VLEDK----SYKGPIDKFIPEELKEEFAQLAGLSVGDTIFFMADKEERAAYYAGMIRTEL 408

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L ++  N + FC++ DFP +E   + K+I F HNPF+MPQGG+E+L+  + L + A+
Sbjct: 409 GEKLDLLEKNAYRFCYVNDFPMFEKEPQTKQIGFTHNPFSMPQGGLEALETMNPLDVLAY 468

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           QYD+VCNG E++SG +RNH   +M +AF   G  +EV++++FG LY AF  G PPH G+A
Sbjct: 469 QYDIVCNGVELSSGAVRNHDMRIMKKAFEIAGYDEEVLKSKFGALYNAFCFGAPPHAGMA 528

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            GIDR++MLL   +N+REV  FPM+ N  DL+ G+P TV+ +QLRE+ +++ +
Sbjct: 529 PGIDRMLMLLKNEENIREVIAFPMNGNAEDLMCGAPGTVTEQQLREVHIKVRD 581


>gi|291518707|emb|CBK73928.1| aspartyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 587

 Score =  524 bits (1349), Expect = e-146,   Method: Composition-based stats.
 Identities = 256/601 (42%), Positives = 364/601 (60%), Gaps = 20/601 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACF 59
           M + RTH+C +L +SD G  V L GW   +R     + F+ +RD YG TQ+V   +    
Sbjct: 1   MTQSRTHNCNELRLSDAGKQVTLVGWFENIRKVSKNLGFVILRDFYGTTQIVIETEEMM- 59

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-- 117
            +  SV  E  + + G V  RS++  N  + TG+IE+    IEIL       LP      
Sbjct: 60  AVIDSVNKESTIQVTGEVRERSSK--NTELPTGEIEVVPTSIEILGKCTHNELPFEINRS 117

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           +E  E+ R KYR+LDLR   +   I+ R++I+  +R  MIA +F+E +TPILT SSPEGA
Sbjct: 118 KEADENTRLKYRYLDLRNPEVKSKIILRSKIVAELRASMIAHDFMEITTPILTCSSPEGA 177

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVP+R + G FYALPQAPQQ+KQ+LMASGFDRYFQIAPCFRDED R+DR PGEFYQL
Sbjct: 178 RDYLVPARNHPGKFYALPQAPQQFKQILMASGFDRYFQIAPCFRDEDARADRSPGEFYQL 237

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNP 296
           DMEM+F  Q+DI   +E+VL  +F ++   NT S   F+RI Y +++ +YG+DKPDLR  
Sbjct: 238 DMEMAFASQEDIFAVVEDVLPPIFAKYGVYNTASTAPFVRIPYLESMDKYGSDKPDLRID 297

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           +++ + T+      F  F           V AI        R   D M            
Sbjct: 298 LVLQDATDVMADCGFGPFEG-------NVVKAIVVDNLTATRKQIDAMIAEVEVATAQKT 350

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +  ++LDE+G +  +G +AK L     +A+   L ++ GD     AG  L     A   
Sbjct: 351 YW--FKLDENGEL--VGGIAKFL-QERKQAVIDALSLKPGDFVGLAAGPLLVAQKTAGVF 405

Query: 417 RNHIAQEL-GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           R  +     G +  + +EFCWI+DFP YE  EE  +++F HNPF+MPQGGM++LK  + L
Sbjct: 406 RKLLGAAAEGHMKKDTYEFCWIVDFPMYEIGEESGELEFCHNPFSMPQGGMDALKNKEPL 465

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            I A+QYDLVCNG E++SG IRNH  E+M++AF  VG+ ++ V+ +F  +Y AF  G PP
Sbjct: 466 DILAYQYDLVCNGVELSSGAIRNHDPEIMIEAFKLVGLGEDDVKAKFPAMYNAFTYGAPP 525

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DR++ML+ G +++RE+  FPM++N  D++M +P+TV  +QL ++ + IV   
Sbjct: 526 HGGIAPGVDRMIMLIAGEESIREIIPFPMNKNAQDIMMDAPATVDQKQLDDVHIAIVMPK 585

Query: 596 K 596
           +
Sbjct: 586 E 586


>gi|302875937|ref|YP_003844570.1| tRNA synthetase class II (D K and N) [Clostridium cellulovorans
           743B]
 gi|307686566|ref|ZP_07629012.1| tRNA synthetase class II (D K and N) [Clostridium cellulovorans
           743B]
 gi|302578794|gb|ADL52806.1| tRNA synthetase class II (D K and N) [Clostridium cellulovorans
           743B]
          Length = 588

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 260/596 (43%), Positives = 367/596 (61%), Gaps = 20/596 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACF 59
           M + RTH+C +L +S+VG  V + GW   +R     + FL +RD+YG+TQVV   +    
Sbjct: 1   MIQSRTHTCNELKMSNVGECVIIVGWYENIRRVSKNLGFLQLRDYYGVTQVVIETEEMM- 59

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-- 117
           +I  SV +E  L I+G+V  R+++  NA + TG IE+  +KI IL   +   LP      
Sbjct: 60  DIVDSVNNESTLSIEGVVRERTSK--NATLATGDIEIVPEKITILGKCQYNALPFEINQS 117

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           +E  E+ R KYR+LDLR   + + I+ R++I+  +R RM    F+E +TPILT SSPEGA
Sbjct: 118 KEADENTRLKYRYLDLRNPNVKEKIILRSKIVADLRNRMNELGFLEINTPILTCSSPEGA 177

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVPSR   G FYALPQAPQQ+KQ+LMASGFDRYFQIAPCFRDED R+DR PGEFYQL
Sbjct: 178 RDYLVPSRNFPGKFYALPQAPQQFKQILMASGFDRYFQIAPCFRDEDARADRSPGEFYQL 237

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNP 296
           DMEM+F  Q+D+ + +E VL  VFE++    T S   F  I Y  A+  YG+DKPDLR  
Sbjct: 238 DMEMAFASQEDVFSIVEEVLPPVFEKYGVYKTASKAPFKHIQYTTAMEVYGSDKPDLRID 297

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           +++ + TE      F  F           V AI        R   D++   A  + Q G 
Sbjct: 298 LLIQDATEVMADCGFGPFEN-------QVVKAIVVDKFNATRKVIDKI--CADVEVQTGN 348

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
              +++LDE+  +  +G ++K L +   E +   L ++ GD     AG  L     A   
Sbjct: 349 KAFWFKLDENNEL--VGGISKFL-VDKKEQVIEALGLKPGDFVGLTAGKKLVAQKTAGVL 405

Query: 417 RNHIAQELGI-INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           R  +       +  +C+EFCWI+DFP YE  EE  K++F HNPF+MPQGGM++L   D  
Sbjct: 406 RKLLGYASETHMKQDCYEFCWIVDFPMYEIGEESGKLEFCHNPFSMPQGGMDALMNEDPE 465

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            I A+QYDLVCNG E++SG +RNH  E+M++AF  VG+ +E V+ +F  +Y AF  G PP
Sbjct: 466 KILAYQYDLVCNGVELSSGAVRNHDPEIMIKAFELVGLGEEDVKAKFPAMYNAFCYGAPP 525

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           H GIA G+DR++ML+ G +++RE+  FPM++N  D++MG+PS V  +QL ++ ++I
Sbjct: 526 HAGIAPGVDRMIMLITGEESIREIIPFPMNKNAMDVMMGAPSEVEQKQLEDVHIKI 581


>gi|203287890|ref|YP_002222905.1| aspartyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|238690591|sp|B5RRQ0|SYD_BORRA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|201085110|gb|ACH94684.1| aspartyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 583

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 208/592 (35%), Positives = 335/592 (56%), Gaps = 9/592 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++   C  +    +   + ++GWV ++R HG + F++IRD Y   Q++ + D    +I 
Sbjct: 1   MFKIIKCNQINNKLINKKIEINGWVKKIRNHGKVTFINIRDRYDEAQILVS-DEKLLKIT 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             ++ E+ + I G +  R  E +N  + TG++E+ A+ I+I+S   ELP  +       +
Sbjct: 60  SQIKMEYCIKIQGKLNLRPLELVNREMKTGELEIIAENIDIISKCNELPFMIENNNNASD 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + +YR+LDLRR+   + I+ R+++I+ +R  +  ++F+E  TP    S+PEGARDFLV
Sbjct: 120 NSKLEYRYLDLRREEQKQKIILRSKVIHIIRNHLTKQDFLELETPTFVKSTPEGARDFLV 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++G FYALPQ+PQ YKQL M +G D+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGHFYALPQSPQIYKQLAMIAGLDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++++I   +EN++  +F+   N   +   F +I Y DA+  YG+DKPD R  +++ ++
Sbjct: 239 FIKKENIFKLIENLIFTIFKNSLNIT-LPKKFKKITYKDAMNIYGSDKPDTRYELLIQDM 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++    S F VF   L      +   I  +    +R+  + + E A+      L +    
Sbjct: 298 SKALKQSPFDVFKDTLQNKGTIKALIIKNQAHNFSRSKINSLEEHAKLYKARTLYFTKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E       G +AK +N +  + +     +++ D  FFIA      C      R  IA 
Sbjct: 358 NNE-----FTGGIAKFINPI-KKTLIETYSLKNNDIIFFIADLWETACKAIGQIRIKIAT 411

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL +IN N FEF WI DFP +E++E+ +    AH+ F+MPQ    +   ++   +    Y
Sbjct: 412 ELNLINKNIFEFLWIYDFPLFEYDEDTQSYKAAHHMFSMPQAKYINTLESNPSKVLGEVY 471

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+ SG IR H  E+  + F+ VG + ++ E RF    +A + G P HGGIA G
Sbjct: 472 DIVLNGTELGSGSIRVHTKELQQRIFNIVGFNDKIAEERFDFFLKALEYGAPIHGGIAIG 531

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IDR++ML+  + ++++V LFP +      L  SPS +S EQL+EL L I   
Sbjct: 532 IDRLLMLMTNSNSIKDVILFPKNSFAASPLDKSPSKISDEQLKELNLTIENK 583


>gi|333004741|gb|EGK24263.1| aspartyl-tRNA synthetase [Shigella flexneri K-218]
          Length = 497

 Score =  523 bits (1347), Expect = e-146,   Method: Composition-based stats.
 Identities = 182/501 (36%), Positives = 272/501 (54%), Gaps = 6/501 (1%)

Query: 96  LSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155
           + A  + I++ A+   LP+       E  R KYR+LDLRR  + + +  R +I + +R  
Sbjct: 1   MLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRF 58

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+Q
Sbjct: 59  MDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQ 118

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           I  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R ++ E    +    +F 
Sbjct: 119 IVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVD--LGDFP 175

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   +   G         G  
Sbjct: 176 VMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGAS 235

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             R   D    + +  G  GLAYI       G      PVAK LN    EAI  R   QD
Sbjct: 236 LTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAILDRTAAQD 295

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
           GD  FF A +              + ++LG+ + + +   W++DFP +E ++ E  +   
Sbjct: 296 GDMIFFGADNKKIVADGMGALLLKVGKDLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAM 354

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           H+PFT P+    +       +  A  YD+V NG+E+  G +R H  ++    F  +GI++
Sbjct: 355 HHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINE 414

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
           E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+  +
Sbjct: 415 EEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEA 474

Query: 576 PSTVSVEQLRELGLRIVENPK 596
           PS  +   L EL +++V+  +
Sbjct: 475 PSFANPTALAELSIQVVKKAE 495


>gi|254495274|ref|ZP_05108198.1| aspartyl/glutamyl-tRNA amidotransferase subunit B/aspartyl-tRNA
            synthetase [Polaribacter sp. MED152]
 gi|85819628|gb|EAQ40785.1| aspartyl/glutamyl-tRNA amidotransferase subunit B/aspartyl-tRNA
            synthetase [Polaribacter sp. MED152]
          Length = 1112

 Score =  523 bits (1347), Expect = e-146,   Method: Composition-based stats.
 Identities = 215/599 (35%), Positives = 329/599 (54%), Gaps = 16/599 (2%)

Query: 4    YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG--ITQVVANPDSACFEI 61
            YRTH   DL    +   V LSGWV  VR HG +IF+D+RD         ++       + 
Sbjct: 521  YRTHKISDLSDDSIKIEVTLSGWVSSVRDHGELIFIDLRDSSNQVFQVRLSRETFPNLDE 580

Query: 62   AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
               ++ E V+ + G+V+ R  +  N+ + TG+IEL    +EIL++++ LP  +    +  
Sbjct: 581  LVKLKPETVIMVTGVVVQRREDDYNSGLRTGKIELETSALEILNLSKTLPFEIKRAMKTN 640

Query: 122  ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            E+ RF+Y+FLD R D + K IV R R+I  +R  +  E F+E  TPILTA + EGAR+F+
Sbjct: 641  ETTRFQYKFLDHRNDEVRKAIVNRHRVIKLLRDILDEEEFLEIETPILTAGTDEGAREFI 700

Query: 182  VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
            VP+R   GSFY LPQAPQQ+KQ+LM  GF++YFQIA CFRDED R DR P EF QLD+EM
Sbjct: 701  VPTRKQAGSFYTLPQAPQQFKQMLMVGGFEKYFQIARCFRDEDSRGDRQP-EFTQLDIEM 759

Query: 242  SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
            ++     I++    +   + ++      +   F  I Y +A+ +YG D+PDLR  + M +
Sbjct: 760  AYASMQQIIDLNTKMFNKIVQKIYGKKWILRPFEVITYKEAMDKYGCDRPDLRYGLEMQD 819

Query: 302  VTEHFVHSEFRVFSKILSVNPGYEVWAIPAK---GGGGNRAFCDRMNEWARSQGQPGLAY 358
            +T+    + F+VFSK +      +   +  +       ++   + +   A+  G  GLAY
Sbjct: 820  ITDIVKDTTFQVFSKPIDDGGIVKCIKVSTEEQGNKRMSKGQIENLTAIAQQNGLGGLAY 879

Query: 359  IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
            I    ++        P+ K L       I    D Q GD  FF A D           R 
Sbjct: 880  IIVNEND-----LQSPIIKFLGEEIAANIIEATDAQVGDIVFFSAADYATANKALDAVRQ 934

Query: 419  HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ----GGMESLKGNDL 474
             + + L +IN       W++DFP +E   +E +  F HNPF+MP         + K +++
Sbjct: 935  EMGRILKLINPKELRPAWVVDFPMFEKT-DEGRWTFTHNPFSMPAVYDLEKHMNGKEDEI 993

Query: 475  LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             +I A QYDL+ NG+EI  G +R H SE++   + N+G +KE +    G +Y+AFQ G P
Sbjct: 994  GTIIAQQYDLILNGYEIGGGSVRAHKSEILEATYKNMGYNKEEMLKSVGTMYKAFQYGAP 1053

Query: 535  PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            PHGGIA G+DR++M+L    ++REV  FP +    DLL  +PS +S +++ E+ ++I++
Sbjct: 1054 PHGGIAWGVDRLMMILEKKASIREVMAFPKTGTSEDLLFNAPSILSDKKVEEMNVKIIK 1112


>gi|167768598|ref|ZP_02440651.1| hypothetical protein CLOSS21_03157 [Clostridium sp. SS2/1]
 gi|167710122|gb|EDS20701.1| hypothetical protein CLOSS21_03157 [Clostridium sp. SS2/1]
          Length = 572

 Score =  523 bits (1346), Expect = e-146,   Method: Composition-based stats.
 Identities = 247/587 (42%), Positives = 361/587 (61%), Gaps = 19/587 (3%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
             +   D+G+ ++++GWV  +R HGG+ F+D+RD YG+ QVV    S    +   VR E 
Sbjct: 2   DQISEGDIGAQLKIAGWVENIRDHGGVSFIDLRDMYGVMQVVLRDTS----LLDHVRKEE 57

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKY 128
            L ++G++  R  ET N  I TG IEL A KI+IL     +LP  +   +E  E +R KY
Sbjct: 58  CLSVEGVIQHRDEETFNPKIPTGTIELEAHKIDILGKVYRDLPFEIATSKEIREDVRLKY 117

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LD+R   +  NI+ R+++I  +R +M    F+E  TPIL ASSPEGARD++VPSR  +
Sbjct: 118 RYLDMRNRKVKDNILFRSKVIRFLREKMEDMGFVEVQTPILCASSPEGARDYVVPSRKYK 177

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G FYALPQAPQQYKQLLM SG D+Y+QIAPCFRDED R+DR PGEFYQLD EM+F  Q+D
Sbjct: 178 GKFYALPQAPQQYKQLLMVSGIDKYYQIAPCFRDEDARADRSPGEFYQLDFEMAFATQED 237

Query: 249 ILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           +    E VL   F++F+          +    Y +A+ ++G+DKPDLRNP+ + +VT+ F
Sbjct: 238 VFKIGEEVLTETFKKFAPEGSVITEAPYPIFSYKEAMLQFGSDKPDLRNPLRIIDVTDFF 297

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366
               F+ F              + AK    ++   +++ ++A+S G  GL Y+  +    
Sbjct: 298 QRCTFKPFH-----GQTVRAINVHAK---LSKGQHEKLLKFAQSIGMGGLGYLEVKE--- 346

Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426
             +   GP+ K +       +     +Q+GD+ FFIA      C +A   RN +   L +
Sbjct: 347 -ELKYKGPIDKFIPDDMKMELAEMAGLQEGDTIFFIAAPEKAACIYAGQIRNELGSRLDL 405

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +  + + FC+I DFP YE +EE  K+ F HNPF+MPQGG+E+L   D L I A+QYD+VC
Sbjct: 406 LEKDAYRFCYINDFPMYEIDEETGKLGFTHNPFSMPQGGLEALNEKDPLDILAYQYDIVC 465

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           NG E++SG +RNH  E+M +AF   G  KE ++++FG LY AFQ G PPH G+A G+DR+
Sbjct: 466 NGVELSSGAVRNHDMEIMEKAFDIAGYDKETLKDKFGALYNAFQFGAPPHAGMAPGVDRM 525

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +MLL   +N+RE+  FPMS    DL+ G+P+ ++ +QLRE+ +++ +
Sbjct: 526 IMLLRNEENIREIIAFPMSGTAQDLMCGAPNEITEQQLREVHIKVRD 572


>gi|332757665|gb|EGJ87998.1| aspartyl-tRNA synthetase [Shigella flexneri 2747-71]
          Length = 497

 Score =  523 bits (1346), Expect = e-146,   Method: Composition-based stats.
 Identities = 182/501 (36%), Positives = 272/501 (54%), Gaps = 6/501 (1%)

Query: 96  LSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155
           + A  + I++ A+   LP+       E  R KYR+LDLRR  + + +  R +I + +R  
Sbjct: 1   MLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRF 58

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+Q
Sbjct: 59  MDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQ 118

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           I  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R ++ E    +    +F 
Sbjct: 119 IVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVD--LGDFP 175

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   +   G         G  
Sbjct: 176 VMTFAEAERRYGSDKPDLRNPMELADVADLLKSVEFAVFAGPANDPKGRVAALRVPGGAS 235

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             R   D    + +  G  GLAYI       G      PVAK LN    EAI  R   QD
Sbjct: 236 LTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAILDRTAAQD 295

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
           GD  FF A +              + ++LG+ + + +   W++DFP +E ++ E  +   
Sbjct: 296 GDMIFFGADNKKIVADGMGALLLKVGKDLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAM 354

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           H+PFT P+    +       +  A  YD+V NG+E+  G +R H  ++    F  +GI++
Sbjct: 355 HHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINE 414

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
           E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+  +
Sbjct: 415 EEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEA 474

Query: 576 PSTVSVEQLRELGLRIVENPK 596
           PS  +   L EL +++V+  +
Sbjct: 475 PSFANPTALAELSIQVVKKAE 495


>gi|224534804|ref|ZP_03675376.1| aspartate--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514052|gb|EEF84374.1| aspartate--tRNA ligase [Borrelia spielmanii A14S]
          Length = 586

 Score =  522 bits (1345), Expect = e-146,   Method: Composition-based stats.
 Identities = 217/591 (36%), Positives = 334/591 (56%), Gaps = 10/591 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            ++   C +L    +   V ++ W+ ++R HG   FLDIRD Y   QV+   +    +I 
Sbjct: 1   MFKIIKCNELNEKLINKKVEINAWIKKIRHHGKFTFLDIRDRYEKAQVLVT-EEHLLKIV 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++ E+ + I GL++ R +  INAN+ TG  E+ A+ I+I+S   ELP  +  +    E
Sbjct: 60  EKIKLEYCIKIQGLLIKRPSNMINANMKTGYFEILAKNIDIISKCNELPFMIEDDNNASE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           + + +YR+LDLRRD+L   I+ R +  + +R  ++   F+E  TP    S+PEGARDF++
Sbjct: 120 NSKLEYRYLDLRRDSLKNKIILRCQATHLIRNFLVKRKFLELETPTFVKSTPEGARDFVI 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR+++GSFYALPQ+PQ YKQL+M +GFD+YFQIA C+RDED R DR P EF QLD+EMS
Sbjct: 180 PSRIHKGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV++++I   +EN+L  +F+   N N        I Y  A+  YG+DKPD R  +I+ ++
Sbjct: 239 FVKKENIFKLIENMLFLIFKNCLNINLPKKFKK-ITYKKAMNTYGSDKPDTRFELILQDI 297

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           + +  +SEF +F   L      ++  +  K    +RA  + + E A+     GL +    
Sbjct: 298 SRNLKNSEFNIFKDTLKNKGVIKILIVKNKADKFSRAKINNLEEIAKLYKTQGLYFTKIE 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF-IAGDPLKFCSFAADARNHIA 421
                N    G +AK L     + I+    +++ D  FF         C      R  IA
Sbjct: 358 -----NNKFSGGIAKFLKTEEQQLIKT-YSLENNDIIFFTANNKWEIACKAMGQIRIKIA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +L +I+ N FEF W+ DFP +E+++  K    AH+ F++P+    +    +        
Sbjct: 412 NDLELIDDNKFEFLWVYDFPLFEYDKNTKTYTPAHHMFSLPKKRYIANLEKNPNKTMGEI 471

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+ SG IR H  E+  + F+ +G  KE  E+RFG   +A + G P HGGIA 
Sbjct: 472 YDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAI 531

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIDR++ML+  + ++++V LFP +      L  SPS +S EQL+ELG+ IV
Sbjct: 532 GIDRLIMLMTKSTSIKDVILFPKNSFAASPLDNSPSKISNEQLKELGINIV 582


>gi|308807226|ref|XP_003080924.1| COG0173: Aspartyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116059385|emb|CAL55092.1| COG0173: Aspartyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 621

 Score =  522 bits (1344), Expect = e-146,   Method: Composition-based stats.
 Identities = 201/594 (33%), Positives = 319/594 (53%), Gaps = 13/594 (2%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSEWV 70
           G +DVGS   L GW+ + R  GGI F D+RD  GI Q+V   +++    E  +++R E V
Sbjct: 31  GDADVGSETTLCGWIDKSRNMGGIAFADVRDSSGIAQIVLEEEASAEVREAFQALRQECV 90

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-----EREYPESIR 125
           +   G V  R  +++N    TG +E+   +++IL+                + E  E  R
Sbjct: 91  VRARGTVRRR--KSVNTKTKTGTVEVVVSELKILNTVGRSLPFAVSESSGEKEEIKEETR 148

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVPS 184
            ++R LDLRR  + +N+  R   + ++R  +  +  F+E  TP+LT S+PEGARD+LVPS
Sbjct: 149 LEHRVLDLRRPQMARNLKLRHDTLRALRRVLEDDYGFLEVETPMLTRSTPEGARDYLVPS 208

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R+  G  YALPQ+PQ +KQ+LM +G DRY+Q+A CFRDED R+DR P EF QLD+EM+F+
Sbjct: 209 RLQPGGAYALPQSPQLFKQMLMVAGVDRYYQVARCFRDEDLRADRQP-EFTQLDIEMAFM 267

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++D ++   E+++R  F+   N   +  +F R+ Y +A+ +YG+DKPDLR  + M  + +
Sbjct: 268 DEDGVMKLAEDLMRAAFKNGVNVE-LPTSFPRMTYAEAMEKYGSDKPDLRYGLEMSTLDD 326

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIP-AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
                EF++F+  L+     +   +   K    N     + + +  +         F R+
Sbjct: 327 ALNGCEFKIFADALATGGTVKALVVNDEKTKIPNSKLKPKGDVFEEAVAAGAGGLAFARV 386

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G               + +A+  +   + GD   F AG            R ++A+ 
Sbjct: 387 GEDGASLEGAKGLVEGTAAHAKAMIDKSGAKPGDLMLFAAGKKALVNKTLDRVRQYVAKT 446

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G +  N     W+ +FP +E+NE+E++ +  H+PFT P         +DL + ++  YD
Sbjct: 447 YGFVPENAHAVLWVTEFPMFEYNEDEERYEAMHHPFTSPNQDDLMANPDDLSNARSIAYD 506

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG EI  G +R +  ++  + F  +G+S    E +FG L  AFQ G PPHGG+A G+
Sbjct: 507 LVYNGVEIGGGSLRIYRRDIQEKVFRAIGLSDAEAEEKFGYLLEAFQYGAPPHGGLAFGL 566

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           DR+VM+L GAK++R+V  FP +     LL  +P  VS EQ  +L ++    P K
Sbjct: 567 DRLVMMLAGAKSIRDVIAFPKTAAGQCLLTEAPGQVSAEQYADLHIKSTSPPPK 620


>gi|301167876|emb|CBW27461.1| aspartyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 596

 Score =  522 bits (1344), Expect = e-146,   Method: Composition-based stats.
 Identities = 213/600 (35%), Positives = 322/600 (53%), Gaps = 22/600 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L    VG  V L GWV++ R  G + F+DIRD YG+TQ+     +    I K 
Sbjct: 9   RTHNCGELREEHVGQTVTLCGWVNKYRDLGALHFIDIRDKYGLTQLGFEAFTGDLAILKD 68

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGEREYPE 122
              E V+ + G V  R     N  + TG +E+  ++IE+LS  +   +P   FG+ E  E
Sbjct: 69  CALESVIKVTGEVAKRPEAAQNKKMDTGLVEVQVKEIEVLSRNDIDNIPFLPFGQIEATE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++ KYR+L+LR   L   +  R++  N++R  +  + FIE  TPIL  S+PEGARD++V
Sbjct: 129 DLKLKYRYLELRTKKLQDILALRSKATNTVRRILQEQKFIEVETPILYKSTPEGARDYVV 188

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G  YALPQ+PQ  KQLLM    D+YFQI  CFRDED R+DR P EF Q+DME+S
Sbjct: 189 PSRVHPGKVYALPQSPQTLKQLLMIGSTDKYFQICRCFRDEDLRADRQP-EFTQIDMEIS 247

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   + I N +E +L  +F+              + Y++A+ R+G+DKPDLR  +    V
Sbjct: 248 FATPEYIKNLVEKILGELFDLEDGFTL-----PMMSYNEALARFGSDKPDLRFGLEHRIV 302

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T  F  S+F VFS +   N   +   +P   G  +R   D + E  +  G  G+A+    
Sbjct: 303 TNIFKDSDFSVFSSVAGANGLIKAIFVPEAMGSFSRKDTDALTEVVKPHGGKGVAFFKVS 362

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVR-LDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            +E       G ++K +     +A+     +  +G   F    D       A   R H+ 
Sbjct: 363 GEE-----RTGGISKFITDEIYQALVATGEESGNGTWLFCADADHDTTHGCADALRRHLG 417

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM-PQGGMESLKGNDLLSIK-- 478
           ++L II  + ++F W+ DFP  EWN ++K+    H+PFTM      ++    D    +  
Sbjct: 418 KKLDII-EDGYKFLWVYDFPLLEWNPDDKRYIARHHPFTMINVDQKDTFIAADPKDSESL 476

Query: 479 ----AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               A  YD+VCNG+E+  G IR H   +  + F  +G+ +E ++++FG    A + G+P
Sbjct: 477 KDMPAQAYDVVCNGYELGGGSIRIHEQPIQKKMFEVLGMGEEEIQSQFGFFVEALKYGVP 536

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGG+A G+DRI+MLL    ++R+V  FP + +  DL+  +PS  +  QL EL     + 
Sbjct: 537 PHGGLAFGLDRIIMLLAKTDSIRDVIAFPKTTSASDLMSKAPSVPAQAQLDELHFNWNKK 596


>gi|319939805|ref|ZP_08014161.1| aspartyl-tRNA synthetase 1 [Streptococcus anginosus 1_2_62CV]
 gi|319811018|gb|EFW07333.1| aspartyl-tRNA synthetase 1 [Streptococcus anginosus 1_2_62CV]
          Length = 579

 Score =  522 bits (1344), Expect = e-146,   Method: Composition-based stats.
 Identities = 209/584 (35%), Positives = 315/584 (53%), Gaps = 11/584 (1%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  +  +GWV  +R HG + F+++RD  G+ QV    DS  F   + +  E
Sbjct: 6   IGNYGLEQVGQKMTATGWVANIRNHGKLAFIELRDREGLLQVFVAGDSPAFTEIEHLHKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V+ R A  +N  I +GQ+EL A+KI+IL+ ++ LP  +       E +R KY
Sbjct: 66  DVISVTGEVVKREARFVNKAIKSGQVELRAEKIQILASSKPLPFELDQHAHTGEELRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR  + +N+  R ++ +++R  +  ++F+E  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRRGKMTENLKLRHQVTSTIRDYLNGKDFLEVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+Q+  CFRDED R DR P EF Q+DMEMSF  + D
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQVVRCFRDEDLRGDRQP-EFTQVDMEMSFASEKD 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I   +E +L+ V ++          F  I Y++A+ R+GTDKPD R  + + N+T     
Sbjct: 245 IRMLVEEMLKAVVKKTHGLELTEA-FPTISYEEAMNRFGTDKPDTRFGLELKNLTNLCQD 303

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           +   +  +  + +       +P       +       +  +  G      +     E+G 
Sbjct: 304 NPSLLLKQAFARHEELWGICVPNATDSFTKKQLSHFYQEMKEFGASRFTSLKV---EAGE 360

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +   G +A         A   R + QDGD    +     +        R  IA++L +IN
Sbjct: 361 L--QGDLASTF-EAEAAAFIDRFEAQDGDLLLLVIAKRRQAQEALGHLRLEIAKQLDLIN 417

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            +  +F W++D+P  EWNEE+ +    H+PFT      E     DL SIK+  YD+V NG
Sbjct: 418 QSRLDFLWVLDWPLLEWNEEQGRYQAMHHPFTQGIFENEQ---EDLASIKSHAYDIVLNG 474

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +EI  G +R H  +     F  +G+ KE  E  FG    A   G PPHGG+A G+DR+VM
Sbjct: 475 YEIGGGSLRIHDRKSQEAMFELLGMEKEDYERDFGFFLEALDYGFPPHGGLALGLDRLVM 534

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           +L G +N+R+V  FP +    D ++ SPS V   Q++EL L + 
Sbjct: 535 ILAGEENIRQVIAFPKNGTGFDPMLESPSQVDAGQVKELHLELK 578


>gi|114565506|ref|XP_524974.2| PREDICTED: aspartyl-tRNA synthetase, mitochondrial isoform 7 [Pan
           troglodytes]
          Length = 645

 Score =  521 bits (1341), Expect = e-145,   Method: Composition-based stats.
 Identities = 193/601 (32%), Positives = 311/601 (51%), Gaps = 25/601 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 226

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 227 LVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 284

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  + + 
Sbjct: 285 MSFVDQTGIQSLIEGLLQYSW--PNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMKII 342

Query: 301 NVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F ++E       LS      +   IP       R   + + ++A       +  +
Sbjct: 343 DISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQEILPV 402

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F   + + N     PVA  +       +   ++ Q+ D     AG+  K CS     R  
Sbjct: 403 FLNANRNWN----SPVANFIMESQRLELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLE 458

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE  + ++ AH+PFT P      L   +
Sbjct: 459 CADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTE 518

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
               ++  YDLV NG EI  G IR H +E+     + +      +      L +A   G 
Sbjct: 519 PKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLKEDVKM---LSHLLQALDYGA 575

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR++ L+ G++++R+V  FP S    DL+  +P +V  E+L+   +R+ +
Sbjct: 576 PPHGGIALGLDRLICLVTGSRSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRVSK 635

Query: 594 N 594
            
Sbjct: 636 P 636


>gi|299135514|ref|ZP_07028698.1| aspartyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298601638|gb|EFI57792.1| aspartyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 618

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 239/614 (38%), Positives = 341/614 (55%), Gaps = 35/614 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RTH CG+L  SD G+ V L GWV+R R HG +IFLD+RD  GITQ+V + +        A
Sbjct: 11  RTHMCGELRSSDAGTTVTLMGWVNRRRDHGNLIFLDVRDRTGITQIVLDKEASPEAHAKA 70

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++ R E+V+ + G V  R     N N++TG IE+   ++ +L+ A+  P     +    E
Sbjct: 71  EAARPEYVVAVTGKVRVRGQGLANPNMVTGDIEVVGNELLLLNEAKTPPFSPAEDAIANE 130

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  + KN   R+R+  ++R  ++ + F+E  TP +T S+PEGARD+LV
Sbjct: 131 EVRLKYRYLDLRRVEMQKNFAVRSRVAMAIRNFLVEQGFLEIETPFMTRSTPEGARDYLV 190

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQ+LM SGFD+YFQIA CFRDED R+DR P EF Q+D+EM+
Sbjct: 191 PSRVHPGHFYALPQSPQIFKQILMISGFDKYFQIARCFRDEDLRADRQP-EFTQIDLEMT 249

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+ I   +E  L+  F+  +     +  F+++ YD AI RYG DKPD+R P ++   
Sbjct: 250 FPRQETIFRVVEGFLQTAFKA-AGIELGNQQFVQMTYDQAIARYGIDKPDMRLPAMVDLS 308

Query: 303 TEHFVHSEFRVFSKILSVNP--GYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            E           + L V+P      + IP  G     A    +NE   S G  GL ++ 
Sbjct: 309 AELTAE-----LRETLKVDPTLPVLGFTIPRVGELSGTARKALVNEIRGSFGDCGLDFLD 363

Query: 361 W---RLDESGNVAGMGPVAKHLNIVNT---------EAIRVRLDMQDGDSCFFIAGDPLK 408
               R +E+  V     +A  L              E + V +  + G    +   DP  
Sbjct: 364 VSRLRTNEA-FVPLAEAIAAKLTAEQIVFNGENFTTEDLAVVITPKPGTPAKW-NHDPQW 421

Query: 409 FCSFAADARNHIAQEL----GII----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
                   R  +A++     G+         F+F W+ DFP YEWNEE K  D AH+PFT
Sbjct: 422 IWKRVGALRLELAKKYADKHGLFTQTGTAADFKFLWVTDFPMYEWNEEAKTWDAAHHPFT 481

Query: 461 MPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
            P     +     ND  +++A  YD+V NG E+ SG IR H  +V  + F ++G++ E  
Sbjct: 482 SPHEDDITSGRLVNDKGAVRALAYDIVLNGTELGSGSIRIHRQDVQAEIFRSLGMTDEEA 541

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
           + RFG    A + G PPHGGIA G+DRIVM+L GA ++REV  FP +    DL++ +P+ 
Sbjct: 542 KARFGFFLDALEYGTPPHGGIALGLDRIVMILAGASSLREVIAFPKTAKAIDLMVDAPTP 601

Query: 579 VSVEQLRELGLRIV 592
           VS +Q+REL LR V
Sbjct: 602 VSEQQMRELSLRTV 615


>gi|255505602|ref|ZP_05347140.3| aspartate--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255266878|gb|EET60083.1| aspartate--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 593

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 257/598 (42%), Positives = 370/598 (61%), Gaps = 21/598 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH+CG L + DVG+ V++ GW   +R     + FL +RD+YG+TQVV   +     I  
Sbjct: 8   RTHTCGALRLGDVGAQVKIVGWFDNLRKVSKNLGFLILRDYYGVTQVVIETEEMM-NIVD 66

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF--GEREYP 121
            +  E  + + G V  RS++  NA + TG+IE+  +KIE+L       LP      +E  
Sbjct: 67  GINYESTISVCGTVRERSSK--NAALPTGEIEVVPEKIELLGKCRYNELPFQIARSKEAD 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R KYR+LDLR   +   I  R++I+  +R  MIA +F+E +TPILT SSPEGARD+L
Sbjct: 125 ENTRLKYRYLDLRNPAVKDKITLRSKIVADLRASMIAHDFLEITTPILTCSSPEGARDYL 184

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR + G FYALPQAPQQ+KQLLMASGFDRYFQIAPCFRDED R+DR PGEFYQLDMEM
Sbjct: 185 VPSRNHPGKFYALPQAPQQFKQLLMASGFDRYFQIAPCFRDEDARADRSPGEFYQLDMEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +F +Q+D+   +E+VL  +F ++       +  F RI Y +A+ +YGTDKPDLR  +++ 
Sbjct: 245 AFADQEDVFAILEDVLPPIFAKYGVYHTASAAPFKRISYLEAMEQYGTDKPDLRIDLLVQ 304

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           + T       F  F+          V A+   G  G R   D++   A  + Q G    +
Sbjct: 305 DATACMADCGFGPFAG-------QTVKAVVVSGFEGTRKVIDKL--CADVEVQSGNKAYW 355

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +++D +G+    G ++K L       +   L ++ GD     AG        A   R  +
Sbjct: 356 FKVDANGD--FAGGISKFL-QERKAQVTEALGLKPGDFIGLSAGKKSAAQKTAGVLRKML 412

Query: 421 AQEL-GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
                  +  + +EFCWI+DFP YE  EE  +++F HNPF+MPQGGM++L+  + L I A
Sbjct: 413 GAACPAHMKTDRYEFCWIVDFPMYEIGEESGELEFCHNPFSMPQGGMKALEEQEPLEILA 472

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +QYDLVCNG E++SG +RNH  E+M++AF+ VG+ ++ V+ +F  +Y AF  G PPH GI
Sbjct: 473 YQYDLVCNGVELSSGAVRNHDPEIMVKAFNLVGLGEDDVKAKFPAMYNAFCYGAPPHAGI 532

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           A G+DR+VML+ G +++RE+  FPM++N  D++MG+P+TV  +QL ++ +RI E PKK
Sbjct: 533 APGVDRMVMLIAGEESIREIIPFPMNKNAQDVMMGAPATVEPKQLEDVHIRI-EMPKK 589


>gi|302669512|ref|YP_003829472.1| aspartyl-tRNA synthetase AspS [Butyrivibrio proteoclasticus B316]
 gi|302393985|gb|ADL32890.1| aspartyl-tRNA synthetase AspS [Butyrivibrio proteoclasticus B316]
          Length = 625

 Score =  520 bits (1339), Expect = e-145,   Method: Composition-based stats.
 Identities = 256/621 (41%), Positives = 367/621 (59%), Gaps = 34/621 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           M + RTH+CG+L +S+VG  V L GW+  +R  G G+ F+ +RD YG TQ+V   +    
Sbjct: 14  MMQSRTHNCGELRISNVGESVTLVGWLENMREVGSGLGFVVLRDFYGTTQIVLETEEMV- 72

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF--GE 117
           + AK++  E  + + GLV  RS++  N    TG IE+  + I +L       LP      
Sbjct: 73  KTAKAINKESTISVKGLVRERSSK--NPKQETGDIEVVPESITVLGRCRYNELPFEINHS 130

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           RE  E+ R KYR+LDLR   + KNI+ R  +I ++R  M    F+E +TPILTASSPEGA
Sbjct: 131 READETARLKYRYLDLRNPEVKKNIILRCNVIAALRQAMTEHGFMEITTPILTASSPEGA 190

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVP+R + G FYALPQAPQQ+KQLLM +GFDRYFQIAPCFRDED R DR PGEFYQL
Sbjct: 191 RDYLVPARKHPGKFYALPQAPQQFKQLLMTAGFDRYFQIAPCFRDEDARGDRSPGEFYQL 250

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNP 296
           DMEM+F  Q+D+ +  E+VL  VFE+F   +  S   F RI Y +A+ +YG+DKPDLR  
Sbjct: 251 DMEMAFATQEDVFSVCEDVLPPVFEKFGTYDRASKAPFTRIPYLEAMEKYGSDKPDLRID 310

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPG--------------YEVWAIPAKGGGGNRAFCD 342
           + + +VTE      F  F+  +S                    + A+       +R F D
Sbjct: 311 LTVTDVTETLKDCGFGPFASTVSAEAAEASEGALTAGAATGVRIKAVVISDFKESRKFID 370

Query: 343 R-MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
           + + +     G       ++R+DE+G +  +G ++K +  +  +A+   L ++ GD    
Sbjct: 371 KTIGDVEVQSGNKA---YWFRMDENGEL--VGGISKFVAPI-KDAVVSALSLKAGDLVVL 424

Query: 402 IAGDPLKFCSFAADARNHIAQEL-GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
            +G        A          + G ++   +EFCWI+DFP YE  EE  +++F HNPF+
Sbjct: 425 SSGKLTAAQKTAGVIVKTFGAAVPGHMDKEKYEFCWIVDFPMYEIGEESGELEFCHNPFS 484

Query: 461 MPQGGMESLKGN-----DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           MP GG+E+L        D L+I A QYDLV NG E++SG +RNH  E+M++AF  V + +
Sbjct: 485 MPSGGLETLLKAERGEIDPLTITADQYDLVVNGIELSSGAVRNHDPEIMIKAFEMVRLGE 544

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
           E V+ +F  +Y AF  G PPH GIA G+DR+VMLL G  ++RE+  FPM++N  D++MG+
Sbjct: 545 EDVKAKFPAMYNAFCYGAPPHAGIAPGVDRMVMLLAGEDSIREIIPFPMNKNAQDIMMGA 604

Query: 576 PSTVSVEQLRELGLRIVENPK 596
           PS V+ +QL EL ++     +
Sbjct: 605 PSYVTDKQLEELHIKTTATEE 625


>gi|24380186|ref|NP_722141.1| aspartyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|46577481|sp|Q8DSG3|SYD1_STRMU RecName: Full=Aspartyl-tRNA synthetase 1; AltName:
           Full=Aspartate--tRNA ligase 1; Short=AspRS 1
 gi|24378190|gb|AAN59447.1|AE015009_7 putative aspartyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 583

 Score =  520 bits (1339), Expect = e-145,   Method: Composition-based stats.
 Identities = 210/586 (35%), Positives = 313/586 (53%), Gaps = 9/586 (1%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  V   GWV  +R HG + F+++RD  G+ QV  +   A F+    +  E
Sbjct: 6   IGNYGLEQVGQKVTAKGWVANIRNHGKLAFIELRDREGLLQVFVDSAVADFDKLHDLHKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            +L + G +++R    +N +I +GQ+EL A+ IEI++ ++ LP  +       E IR KY
Sbjct: 66  SILAVTGEIVARDERFVNPHIKSGQVELRAETIEIIASSKLLPFELDNHAHAGEDIRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++  ++R  +   +FI+  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTANLKLRHQVTKAIRDYLNQADFIDVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+EMSFV ++D
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLEMSFVSEED 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           + N +E +L+ V +  S G  ++  F  I Y  A+RR+G+DKPD R  + + ++TE    
Sbjct: 245 VRNLVEGMLKAVVKA-SKGIELTEAFPIISYAQAMRRFGSDKPDTRFAMELKDLTELSRG 303

Query: 309 SEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESG 367
           +      K L   N                      + +     G  G A       E G
Sbjct: 304 NTSLFLQKGLKKENGVVMGICAKNAAKAFTNRQMATLKQLVMDFGVAGFATATI---EKG 360

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
            V   G +       NTE +    + +DGD  FF+ G   +        R  +A++L +I
Sbjct: 361 QVT--GSLKSTFKDHNTE-LLELFEAEDGDMIFFVTGSLKRVQEALGGLRVRLAKDLELI 417

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
           + +   F W++D+P  EWNE+  +    H+PFT       S    +   + +  YD+V N
Sbjct: 418 DNDKLNFLWVVDWPLLEWNEDLNRYQAMHHPFTQGAFEDGSDWKENPEKMMSRAYDIVLN 477

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G+EI  G +R H        F  +G+ KE  E  FG    A + G PPHGG+A G+DR+V
Sbjct: 478 GYEIGGGSLRIHKRSAQEAMFELLGMKKEDYERDFGFFLEALEYGFPPHGGLALGLDRLV 537

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           M+L    N+REV  FP +    D ++ SPS V+ +QL EL L + +
Sbjct: 538 MILAEEGNIREVIAFPKNGQGADAMLESPSLVADQQLAELRLALRD 583


>gi|332219612|ref|XP_003258946.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Nomascus
           leucogenys]
          Length = 645

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 194/598 (32%), Positives = 309/598 (51%), Gaps = 25/598 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 226

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 227 LVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 284

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  I + 
Sbjct: 285 MSFVDQTGIQSLIEGLLQYAW--PNDKDPVVIPFPTMTFAEALATYGTDKPDTRFGIKII 342

Query: 301 NVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F ++E       LS      +   IP       R   + + ++A       +  +
Sbjct: 343 DISDMFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAAHHFNQEILPV 402

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F   + + N     PVA  +       +   ++ Q+ D     AG+  K CS     R  
Sbjct: 403 FLNANRNWN----SPVANFIMESQRLELIRLMETQEEDVILLTAGEHNKACSLLGKLRLE 458

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE  + ++ AH+PFT P      L   +
Sbjct: 459 CADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTE 518

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
               ++  YDLV NG EI  G IR H +E+     + +      +      L +A   G 
Sbjct: 519 PKKARSQHYDLVLNGNEIGGGSIRIHNAELQHYILATLLKEDVKM---LSHLLQALDYGA 575

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGGIA G+DR++ L+ G+ ++R+V  FP S    DL+  +P +V  E+L+   +R+
Sbjct: 576 PPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRV 633


>gi|225873931|ref|YP_002755390.1| aspartate--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|254781707|sp|C1FAE8|SYD_ACIC5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225793643|gb|ACO33733.1| aspartate--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 610

 Score =  519 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 229/612 (37%), Positives = 325/612 (53%), Gaps = 29/612 (4%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           + RTH+CG+L  +  G  + + GWV+R R HG +IFLD+RD YGITQVV + D +    A
Sbjct: 8   KQRTHTCGELRAAHAGETITIMGWVNRRRDHGNLIFLDLRDRYGITQVVLDKDLSAEAHA 67

Query: 63  K--SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           K    R E+V+C  G V +RS E IN  + TG+IE++A ++ IL+ ++  P     E   
Sbjct: 68  KAEQARPEYVICATGKVRARSQEAINPKMPTGEIEIAATELLILNDSKVPPFSPAEEAIA 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  +  N   R ++  ++R  +  + F E  TP +T S+PEGARD+
Sbjct: 128 NEEVRLKYRYLDLRRPEMQHNFEVRHKVALAVRQYLSGQGFFEVETPFMTRSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ G FYALPQ+PQ +KQ+LM SG DRYFQIA CFRDED R+DR P EF Q+D+E
Sbjct: 188 LVPSRVHPGEFYALPQSPQLFKQILMISGMDRYFQIARCFRDEDLRADRQP-EFTQIDLE 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+F +Q+ I   +E  L   FE       ++  F R+ YD AI  YG DKPDLR P  M 
Sbjct: 247 MTFPQQETIFGVVEGFLAAAFEAVG--QQITVPFPRMTYDKAIELYGIDKPDLRLP-PMT 303

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V   F   E +     +          IP K    +        +    Q    LAY+ 
Sbjct: 304 DVRSVFSDEELQSLK--IEPGMPIVAIVIPNK-SAMSNTQKKAFGKEVEEQVGAELAYLD 360

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF--------IAGDPLKFCSF 412
             ++          +A  ++       ++     D              ++ D       
Sbjct: 361 --VERLRTSPQFALLADRIDAAAAAHCKLERVEPDHRLVVISPRLGAAAVSRDTSWVYKR 418

Query: 413 AADARNHIAQELGIINC--------NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
           A   R  + +     +           ++F W+ DFPF+EW+E+     FAH+PFT P  
Sbjct: 419 AGQLRLELGKRFAAEHKAFEKKGTAADYQFLWVTDFPFFEWDEQSHTWTFAHHPFTSPHQ 478

Query: 465 GM--ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
                    +D  +++A  YD+V NG E+ SG IR H  +V  Q F  +G+S +  + RF
Sbjct: 479 DDLIAGRLESDQAAVRALAYDVVLNGTELGSGSIRIHRQDVQQQIFRALGMSDDEAKERF 538

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           G    A Q G PPHGGIA G+DRIVM+L GA ++REV  FP +    DL++ +P+ VS  
Sbjct: 539 GFFLEALQYGTPPHGGIALGLDRIVMILAGASSLREVIAFPKTAKAIDLMVDAPTPVSDA 598

Query: 583 QLRELGLRIVEN 594
           QLREL +R  + 
Sbjct: 599 QLRELHIRPTKQ 610


>gi|145350037|ref|XP_001419430.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579661|gb|ABO97723.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 623

 Score =  519 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 211/602 (35%), Positives = 322/602 (53%), Gaps = 13/602 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           R    G L   DVG+   L GW+ + R  GGI F D+RDH GI Q+VA+ D++    E  
Sbjct: 24  RDRLAGTLRDGDVGAEATLCGWIDKSRDMGGIAFADVRDHSGIAQIVADEDASAEVRETF 83

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFG--E 117
            ++R E V+   G V +R  +++N    TG +EL   +++IL+    +    +      +
Sbjct: 84  GNLRQECVVRARGTVRAR--KSVNKKTKTGTVELVVTELKILNSVGKSLPFAVSESSGEK 141

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEG 176
            E  E  R ++R LDLRR  + +N+  R   + ++R  M  +  F+E  TP+LT S+PEG
Sbjct: 142 EEIKEETRLEHRVLDLRRPQMARNLKLRHDTLRALRKVMEDDYGFLEVETPMLTRSTPEG 201

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSR+  G  YALPQ+PQ +KQ+LM +G DRY+Q+A CFRDED R+DR P EF Q
Sbjct: 202 ARDYLVPSRLQPGGAYALPQSPQLFKQMLMVAGVDRYYQVARCFRDEDLRADRQP-EFTQ 260

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+EM+F +   I+   E+++R  F+   + + +  +F ++ Y  A+ +YG+DKPDLR  
Sbjct: 261 LDIEMAFTDDAGIMKLAEDLMRAAFKSGVDVD-LPASFPQMTYAHAMEKYGSDKPDLRYG 319

Query: 297 IIMHNVTEHFVHSEFRVFSKILS-VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
           + M  + +     EF++F+  L+  N   +   +       N     + + +  +     
Sbjct: 320 LEMTTLDDALAGCEFKIFADALAESNGTVKALVVDDDKKIPNSKLKPKGDVFNEALAAGA 379

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
               F R+ + G               +  A+      + GD   F AG+          
Sbjct: 380 GGLAFARVADDGKSLEGAKGLVEGTAAHAAAMISASGAKPGDLMLFAAGNKALVNKTLDR 439

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R +IA+   +I  N     WI +FP +E+NE+E + +  H+PFT P     +   +DL 
Sbjct: 440 VRQYIAKTYDMIPENAHAVLWITEFPMFEFNEDENRYEAMHHPFTAPNQDDAAANPDDLT 499

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
             +A  YDLV NG EI  G +R +  +V  + F  +G+S E  EN+FG L  AFQ G PP
Sbjct: 500 GARAIAYDLVYNGVEIGGGSLRIYRRDVQEKVFRAIGLSDEEAENKFGYLMEAFQYGAPP 559

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGG+A G+DR+VM+L GAK++R+V  FP +     LL  +P  VS  Q  +L +R V  P
Sbjct: 560 HGGLAFGLDRLVMMLAGAKSIRDVIAFPKTAAGQCLLTEAPGQVSDAQYADLHVRSVAPP 619

Query: 596 KK 597
            K
Sbjct: 620 PK 621


>gi|40789249|ref|NP_060592.2| aspartyl-tRNA synthetase, mitochondrial precursor [Homo sapiens]
 gi|74758347|sp|Q6PI48|SYDM_HUMAN RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; Flags:
           Precursor
 gi|34783643|gb|AAH45173.1| DARS2 protein [Homo sapiens]
 gi|56203852|emb|CAI20380.1| aspartyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|119611367|gb|EAW90961.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b [Homo
           sapiens]
 gi|119611368|gb|EAW90962.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b [Homo
           sapiens]
          Length = 645

 Score =  519 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 192/601 (31%), Positives = 308/601 (51%), Gaps = 25/601 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKNFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 226

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 227 LVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 284

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I + +E +L+  +   ++ + V   F  + + + +  YGTDKPD R  + + 
Sbjct: 285 MSFVDQTGIQSLIEGLLQYSW--PNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFGMKII 342

Query: 301 NVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F ++E       LS      +   IP       R   + +  +A       +  +
Sbjct: 343 DISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEILPV 402

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F   + + N     PVA  +       +   ++ Q+ D     AG+  K CS     R  
Sbjct: 403 FLNANRNWN----SPVANFIMESQRLELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLE 458

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE  + ++ AH+PFT P      L   +
Sbjct: 459 CADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTE 518

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
               ++  YDLV NG EI  G IR H +E+     + +      +      L +A   G 
Sbjct: 519 PKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLKEDVKM---LSHLLQALDYGA 575

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR++ L+ G+ ++R+V  FP S    DL+  +P +V  E+L+   +R+ +
Sbjct: 576 PPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRVSK 635

Query: 594 N 594
            
Sbjct: 636 P 636


>gi|283852906|ref|ZP_06370167.1| aspartyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283571735|gb|EFC19734.1| aspartyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 467

 Score =  518 bits (1335), Expect = e-145,   Method: Composition-based stats.
 Identities = 193/473 (40%), Positives = 277/473 (58%), Gaps = 12/473 (2%)

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  L  N + R + + S+R  +    F+E  TP+LT S+PEGARDFLVP
Sbjct: 2   LRLKYRYLDLRRPKLAANFLLRHKAVQSIRRYLDTLGFLEVETPVLTKSTPEGARDFLVP 61

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+  G+FYALPQ+PQ +KQLLM SGFDRY+Q+  CFRDED R+DR P EF Q+D+EMSF
Sbjct: 62  SRMTNGAFYALPQSPQLFKQLLMMSGFDRYYQVVKCFRDEDLRADRQP-EFTQVDIEMSF 120

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+++ ++N  E ++R +F+E ++   + + F R+ + +AIR YG DKPD+R  + + +V+
Sbjct: 121 VDEEQVMNMAETMVRTMFKEAADI-ALPDVFPRMTFAEAIRDYGLDKPDIRFGLKLVDVS 179

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
                S+F+VF+K   V          A G   +R   D + E+ +  G  GLA+I  + 
Sbjct: 180 PIVRESQFQVFAKAELVKG-----IRVAGGAALSRKEIDDLTEFVKIYGAKGLAWIKIKE 234

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           DE        P AK L+    + +   LD++ GD  FF AG P    +     R  + + 
Sbjct: 235 DE-----WQSPFAKFLSDAERQGLIEALDIEVGDIVFFQAGAPDMVNTALGYLRIQLGER 289

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            G+I    F   W+ DFP  E++ E K+    H+PFT PQ G      +      +  YD
Sbjct: 290 FGLIPEGTFAPVWVTDFPLLEYDPEAKRYAARHHPFTAPQPGNLERLADAPAEALSRAYD 349

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV NG EI  G IR H  E     F+ +GI     E++FG L RA + G PPHGGIA G+
Sbjct: 350 LVLNGSEIGGGSIRIHDRETQKAMFAVLGIEAGEAEDKFGFLLRALEYGAPPHGGIAFGL 409

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           DR++M+L GAK++R+V  FP +Q    +L  +P  V+  QLRELG+++    K
Sbjct: 410 DRLIMILSGAKSIRDVIAFPKTQKAMCMLTEAPGEVATAQLRELGIKLRTRDK 462


>gi|290579838|ref|YP_003484230.1| putative aspartyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996737|dbj|BAH87338.1| putative aspartyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 583

 Score =  517 bits (1332), Expect = e-144,   Method: Composition-based stats.
 Identities = 209/586 (35%), Positives = 314/586 (53%), Gaps = 9/586 (1%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+ G+  VG  V   GWV  +R HG + F+++RD  G+ QV  +   A F+    +  E
Sbjct: 6   IGNYGLEQVGQKVTAKGWVANIRNHGKLAFIELRDREGLLQVFVDSAVADFDKLHDLHKE 65

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            +L + G +++R    +N +I +GQ+EL A+ IEI++ ++ LP  +       E IR KY
Sbjct: 66  SILAVTGEIVARDERFVNPHIKSGQVELRAETIEIIASSKLLPFELDNHAHAGEDIRQKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR+ +  N+  R ++  ++R  +   +FI+  TP LT S+PEGARDFLVPSRV +
Sbjct: 126 RYLDLRREKMTANLKLRHQVTKTIRDYLNQADFIDVETPYLTKSTPEGARDFLVPSRVFK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYALPQ+PQ  KQLLM +G +RY+QI  CFRDED R DR P EF Q+D+EMSFV ++D
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQP-EFTQVDLEMSFVSEED 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           + N +E +L+ V +  S G  ++  F  I Y  A+RR+G+DKPD R  + + ++TE    
Sbjct: 245 VRNLVEGMLKAVVKA-SKGIELTEAFPIISYAQAMRRFGSDKPDTRFAMELKDLTELSRG 303

Query: 309 SEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESG 367
           +      K L   N                      + +     G  G A       E G
Sbjct: 304 NTSLFLQKGLKKENGVVMGICAKNAAKAFTNRQMATLKQLVMDFGVAGFATATI---EKG 360

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
            V   G +       NTE +    + +DGD  FF+ G   +        R  +A++L +I
Sbjct: 361 QVT--GSLKSTFKDHNTE-LLELFEAEDGDMIFFVTGSLKRVQEALGGLRVRLAKDLELI 417

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
           + +   F W++D+P  EWNE+  +    H+PFT       S    +   + +  YD+V N
Sbjct: 418 DNDKLNFLWVVDWPLLEWNEDLNRYQAMHHPFTQGAFEDGSDWKENPEKMMSRAYDIVLN 477

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G+EI  G +R H        F  +G+ KE  E  FG    A + G PPHGG+A G+DR+V
Sbjct: 478 GYEIGGGSLRIHERSAQEAMFELLGMKKEDYERDFGFFLEALEYGFPPHGGLALGLDRLV 537

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           M+L   +N+REV  FP +    D ++ SPS V+ +QL +L L + +
Sbjct: 538 MILAEEENIREVIAFPKNGQGADAMLESPSLVAEQQLADLRLALRD 583


>gi|158255182|dbj|BAF83562.1| unnamed protein product [Homo sapiens]
          Length = 645

 Score =  517 bits (1331), Expect = e-144,   Method: Composition-based stats.
 Identities = 192/601 (31%), Positives = 308/601 (51%), Gaps = 25/601 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQCRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKNFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 226

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 227 LVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 284

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I + +E +L+  +   ++ + V   F  + + + +  YGTDKPD R  + + 
Sbjct: 285 MSFVDQTGIQSLIEGLLQYSW--PNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFEMKII 342

Query: 301 NVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F ++E       LS      +   IP       R   + +  +A       +  +
Sbjct: 343 DISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEILPV 402

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F   + + N     PVA  +       +   ++ Q+ D     AG+  K CS     R  
Sbjct: 403 FLNANRNWN----SPVANFIMESQRLELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLE 458

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE  + ++ AH+PFT P      L   +
Sbjct: 459 CADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTE 518

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
               ++  YDLV NG EI  G IR H +E+     + +      +      L +A   G 
Sbjct: 519 PKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLKEDVKM---LSHLLQALDYGA 575

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR++ L+ G+ ++R+V  FP S    DL+  +P +V  E+L+   +R+ +
Sbjct: 576 PPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRVSK 635

Query: 594 N 594
            
Sbjct: 636 P 636


>gi|149636279|ref|XP_001515219.1| PREDICTED: similar to DARS2 protein [Ornithorhynchus anatinus]
          Length = 880

 Score =  517 bits (1331), Expect = e-144,   Method: Composition-based stats.
 Identities = 191/598 (31%), Positives = 308/598 (51%), Gaps = 25/598 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++CG+L  S +G  V L GW+   R     +FL +RD +G+ QVV   D +   + K+
Sbjct: 286 RTNTCGELCSSHLGQEVTLCGWIQYRRQS---LFLVLRDFHGLIQVVIPQDESAASVKKA 342

Query: 65  VR---SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +     E V+ + G V+SR     N  + TG+IE+  +  EIL+  ++LP  +    +  
Sbjct: 343 LCEAPMESVVQVTGTVISRPPGQENPKMPTGEIEIKVKSAEILNSCKKLPFEIKDFLKKT 402

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 403 EALRMQYRYLDLRSFQMQHNLRLRSQMVMKMREFLCNLHGFVDVETPTLFKKTPGGAKEF 462

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A CFRDE  + DR P EF Q+D+E
Sbjct: 463 VVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCFRDEGSKPDRQP-EFTQIDIE 520

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I   +E +L+  F        ++  F  + Y +A+  YG DKPD R  + + 
Sbjct: 521 MSFVDQAGIQKLIEGLLQ--FSWPKEKGHITTPFPSMSYSEALTSYGLDKPDTRFGMKIL 578

Query: 301 NVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           +V++    +E     K LS      +   +P       R   + + E+A +     ++ +
Sbjct: 579 DVSDILKTTEIEFVQKALSEPQGAIKAICVPEGTKHLKRKDIESLKEFAETHFNQEISPL 638

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           + R + +       P  K L+          +++Q+ D     AG+    CS     R  
Sbjct: 639 YLRSNRN----WKSPFTKALSEEQKLEFIKLMEIQEEDLVLLTAGEHTNSCSLLGKLRLQ 694

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473
            A+ L      + + + F F W++DFP +   EE  ++++ AH+PFT P      L  ++
Sbjct: 695 CAELLESRGLMLRDPSAFHFLWVVDFPLFLPKEENPEELESAHHPFTAPHPDDTHLLFSE 754

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +++  YDLV NG E+  G IR H +E        V      +      L  A   G 
Sbjct: 755 PRKVRSQHYDLVLNGSEVGGGSIRIHSAEQQHYILETVLKEDVKL---LSHLLEALSFGA 811

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGGIA G+DR++ L+ GA ++R+V  FP S    DL+  +P  +  E+L+   +++
Sbjct: 812 PPHGGIALGLDRLICLITGAPSIRDVIAFPKSVRGHDLMSNAPDYLPPEELKPYHIQV 869


>gi|13357846|ref|NP_078120.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761954|ref|YP_001752370.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920413|ref|ZP_02931733.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508678|ref|ZP_02958171.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701928|ref|ZP_02971573.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|27923864|sp|Q9PQK5|SYD_UREPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|11271291|pir||D82910 aspartyl-tRNA synthetase UU286 [imported] - Ureaplasma urealyticum
 gi|6899259|gb|AAF30695.1|AE002125_6 aspartyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827531|gb|ACA32793.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902855|gb|EDT49144.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675596|gb|EDT87501.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700672|gb|EDU18954.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 578

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 208/585 (35%), Positives = 338/585 (57%), Gaps = 12/585 (2%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
            CG +G   +   V L+GWV +VR  G ++F+D++D +GI Q+ A      F     +  
Sbjct: 4   YCGYIGEEHLEKNVILNGWVKKVRKMGNLVFVDLKDRFGIVQIFATKSDGVFNELTQLSR 63

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           E V+ ++GLV+ R  +  N ++ TG+ E+  +KI I S A+  PL +  E +  E IRF+
Sbjct: 64  EDVINVEGLVLLR--KNPNNDLKTGRFEIHVKKILIYSKAKTPPLIIEDETDANEEIRFR 121

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           YR+LDLRRD   K    R+++  + R  + +++FIE  TPIL   +PEGARDF VP+R  
Sbjct: 122 YRYLDLRRDVNLKIFELRSKVYQAFRNYLYSQDFIETETPILAKPTPEGARDFYVPTRTR 181

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           +  FYALPQ+PQ +KQLLM +GF +YFQI  CFRDED RSDR P EF Q+D+E+SF ++ 
Sbjct: 182 K--FYALPQSPQTFKQLLMVAGFQKYFQITKCFRDEDLRSDRQP-EFTQVDIELSFADEI 238

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
           +I   +EN+L+ VF++  N + ++  F+R+ Y+ AI  YG+DKPDLR  + +  +  +F 
Sbjct: 239 EIQTLIENLLKYVFKQTINVD-LTTPFMRMSYEQAINDYGSDKPDLRFDLKIKTLNTYFE 297

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESG 367
           +S+   F K L  N       +P      N+     + ++A+ +G  GL++I  + DE  
Sbjct: 298 NSKTLFFQKALLNNQSIRAILVPNI--NLNKKQVQTLEKFAKDKGAKGLSWISIK-DEKI 354

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
               +  + +  + +  + I    ++  G S   +A             R ++A  L + 
Sbjct: 355 IDGSLLSIQE--DHIIYKTIFKDFNLSTG-SILLVADTFDIASQALGLVRINLASILNLK 411

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             N F+F WI+D+P YE++ E ++   AH+PFTMP     +    +    +   YD+V N
Sbjct: 412 KPNIFKFVWIIDWPLYEYDNEAQRFVAAHHPFTMPTLETLNTFDVNKKDARGRSYDIVLN 471

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G+E+  G +R    ++  + F ++ +S E    +FG L  AF+ G+PPH GIA G+DR++
Sbjct: 472 GYELGGGSVRIIDQQIQRRMFKSINMSDEEANLKFGFLLTAFEYGVPPHCGIALGLDRLM 531

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           M+L+ ++ +R+V  FP + N  D+++ +PS ++ E L+ELGL+I 
Sbjct: 532 MILVNSEYIRDVVAFPKNNNGVDMMLDAPSNMNDEDLKELGLKIK 576


>gi|58403364|gb|AAH89191.1| Aspartyl-tRNA synthetase 2 (mitochondrial) [Mus musculus]
          Length = 653

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 199/612 (32%), Positives = 312/612 (50%), Gaps = 25/612 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF---EI 61
           RT++CG+L  S +G  V L GWV   R +    FL +RD +G+ Q++   D +      I
Sbjct: 49  RTNTCGELRSSHLGQEVTLCGWVQYRRQN---TFLVLRDCHGLVQILIPQDESAASVRGI 105

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 106 LCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 165

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 166 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 225

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 226 LVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 283

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ  I   +E +L+  +    + + +   F  + + +A+  YGTDKPD R  + + 
Sbjct: 284 MSFVEQTGIQRLVEGLLQYSW--PGDKDPLVTPFPSMTFAEALATYGTDKPDTRFGMKIV 341

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF-CDRMNEWARSQGQPGLAYI 359
           +V++ F ++E R     L+   G         G    R    + + ++A       +  I
Sbjct: 342 DVSDVFRNTELRFLQDALAKPQGTVKAICVHDGAKYLRKEDIEFIRKFAVHHFSQEVLPI 401

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F    ++       P AK +       +   +++Q+ D     AG+  K CS     R  
Sbjct: 402 FLNAKKN----WSSPFAKFIMEEERLELARSMEIQEEDIVLLTAGEHEKACSLLGKLRLE 457

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE   +++ AH+PFT P      L   +
Sbjct: 458 CADLLEMRGAVLRDPAVFSFLWVVDFPLFLAKEESPTELESAHHPFTAPNSSDIHLLYTE 517

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              ++   YDLV NG EI  G  R H +   LQ +    + KE V+     L +A   G 
Sbjct: 518 PEKVRGQHYDLVLNGNEIGGGSARIHDA--QLQRYILETLLKEDVK-LLSHLLQALDYGA 574

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR+V L+ GA ++R+V  FP S    DL+  +P +VS E+L+   + ++ 
Sbjct: 575 PPHGGIALGLDRLVCLVTGAPSIRDVIAFPKSYRGQDLMSNAPDSVSPEELKPYHIHVLW 634

Query: 594 NPKKILKISVTT 605
                 + +  T
Sbjct: 635 PADSEEESASAT 646


>gi|126306429|ref|XP_001373324.1| PREDICTED: similar to DARS2 protein [Monodelphis domestica]
          Length = 808

 Score =  516 bits (1329), Expect = e-144,   Method: Composition-based stats.
 Identities = 190/602 (31%), Positives = 311/602 (51%), Gaps = 25/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++CG+L  S +G  V L GW+   R     +FL +RD +G+ QVV   D +   + K 
Sbjct: 166 RTNTCGELRSSHLGQEVTLCGWIQYRRQS---LFLILRDFHGLIQVVIPQDESAASVKKL 222

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +     E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 223 LCEAPIESVVQLTGTVISRPPGQENPKMPTGEIEIKVKTAELLNSCKKLPFEIKDFMKKT 282

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R K+R+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 283 EALRMKFRYLDLRSSQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKKTPGGAKEF 342

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR   G FY+LPQ+PQQ+KQLLM  GFDRYFQ+A C+RDE  + +R P EF Q+D+E
Sbjct: 343 VVPSR-EPGKFYSLPQSPQQFKQLLMVGGFDRYFQVARCYRDEGSKPERQP-EFTQVDIE 400

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I   +E +L+  + +  + N ++  F  + Y +A+  YGTDKPD R  + + 
Sbjct: 401 MSFVDQAGIQKLIEGLLQYSWPK--DKNPLTIPFPSMTYTEALDFYGTDKPDTRFGMKIV 458

Query: 301 NVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           +V++ F ++E      +L       +   IP           + + E+A +     ++ +
Sbjct: 459 DVSDIFRNTEIEFLRDMLKKPQGAIKTICIPGGAKYLKSKDFEAIKEFAVNHFNQEVSPL 518

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F +     + +   P+ K L      A+   L +Q+ D     AG+  K CS     R  
Sbjct: 519 FLKT----SGSRKSPLTKLLKEEEKSALISLLRVQEEDVVLLTAGEHNKACSVLGKLRLE 574

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W+++FP +   EE+ + ++ AH+PFT P      L   +
Sbjct: 575 CADLLEDRGVVLRDPAAFHFLWVVEFPLFLPKEEDPRELESAHHPFTAPHPSDVHLLYTE 634

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +++  YDLV NG E+  G IR H +E        V      +      L +A   G 
Sbjct: 635 PEKVRSLHYDLVLNGSEVGGGSIRIHKAEQQQYVLETVLKEDVKL---LSHLLQALDFGA 691

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR+V L+ G+ ++R+V  FP +    DL+  +P  V+ E +    +++  
Sbjct: 692 PPHGGIALGLDRLVCLITGSPSIRDVIAFPKTFRGHDLMSNAPDYVTPEDIDPYHIQVKR 751

Query: 594 NP 595
             
Sbjct: 752 AE 753


>gi|27369928|ref|NP_766232.1| aspartyl-tRNA synthetase, mitochondrial precursor [Mus musculus]
 gi|81913222|sp|Q8BIP0|SYDM_MOUSE RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; Flags:
           Precursor
 gi|26332118|dbj|BAC29789.1| unnamed protein product [Mus musculus]
 gi|50370336|gb|AAH76606.1| Aspartyl-tRNA synthetase 2 (mitochondrial) [Mus musculus]
 gi|74218347|dbj|BAE23785.1| unnamed protein product [Mus musculus]
 gi|148707385|gb|EDL39332.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_d [Mus
           musculus]
          Length = 653

 Score =  516 bits (1328), Expect = e-144,   Method: Composition-based stats.
 Identities = 198/612 (32%), Positives = 313/612 (51%), Gaps = 25/612 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---I 61
           RT++CG+L  S +G  V L GW+   R +    FL +RD +G+ Q++   D +      I
Sbjct: 49  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDCHGLVQILIPQDESAASVRRI 105

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 106 LCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 165

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 166 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 225

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 226 LVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 283

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ  I   +E +L+  +    + + +   F  + + +A+  YGTDKPD R  + + 
Sbjct: 284 MSFVEQTGIQRLVEGLLQYSW--PGDKDPLVTPFPSMTFAEALATYGTDKPDTRFGMKIV 341

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF-CDRMNEWARSQGQPGLAYI 359
           +V++ F ++E R     L+   G         G    R    + + ++A       +  I
Sbjct: 342 DVSDVFRNTELRFLQDALAKPQGTVKAICVHDGAKYLRKEDIEFIRKFAVHHFSQEVLPI 401

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F    ++       P AK +       +   +++Q+ D     AG+  K CS     R  
Sbjct: 402 FLNAKKN----WSSPFAKFIMEEERLELARSMEIQEEDIVLLTAGEHEKACSLLGKLRLE 457

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE   +++ AH+PFT P      L   +
Sbjct: 458 CADLLEMRGAVLRDPAVFSFLWVVDFPLFLAKEESPTELESAHHPFTAPNSSDIHLLYTE 517

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              ++   YDLV NG EI  G +R H +   LQ +    + KE V+     L +A   G 
Sbjct: 518 PEKVRGQHYDLVLNGNEIGGGSVRIHDA--QLQRYILETLLKEDVK-LLSHLLQALDYGA 574

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR+V L+ GA ++R+V  FP S    DL+  +P +VS E+L+   + ++ 
Sbjct: 575 PPHGGIALGLDRLVCLVTGAPSIRDVIAFPKSYRGQDLMSNAPDSVSPEELKPYHIHVLW 634

Query: 594 NPKKILKISVTT 605
                 + +  T
Sbjct: 635 PADSEEESASAT 646


>gi|291397254|ref|XP_002715040.1| PREDICTED: aspartyl-tRNA synthetase 2, mitochondrial [Oryctolagus
           cuniculus]
          Length = 646

 Score =  515 bits (1326), Expect = e-144,   Method: Composition-based stats.
 Identities = 191/598 (31%), Positives = 309/598 (51%), Gaps = 25/598 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +   IFL +RD +G+ Q+V   D +   + K 
Sbjct: 44  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---IFLVLRDFHGLVQIVIPQDESAASVKKI 100

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V++R     N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 101 LCEAPVESVVQVSGTVVARPPGQENPKMPTGEIEIKVKTAELLNSCKKLPFEIKDFVKKT 160

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   + +N+  R++++  MR  +     FI+  TP L   +P GA++F
Sbjct: 161 EALRLQYRYLDLRSFQMQRNLRLRSQMVMRMREYLCNLHGFIDIETPTLFKKTPGGAKEF 220

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  GFDRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 221 LVPSR-EPGKFYSLPQSPQQFKQLLMIGGFDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 278

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I   +E +L+  +   S+   V+  F  + + +A+  YGTDKPD R  + + 
Sbjct: 279 MSFVDQTGIQQLIEGLLQYSW--PSDRGAVALPFPSMTFAEALATYGTDKPDTRFGMKII 336

Query: 301 NVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           +++  F ++E       LS      +   +P       R   + + ++A       +  +
Sbjct: 337 DISNVFRNTEIGFLQDALSKPQGTVKAICVPGGAKYLKRKDIESIRKFAVDHFNQEVLPV 396

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F +     ++    PVA+ +           + +Q+ D     AG+  K CS     R  
Sbjct: 397 FLKT----SINWNSPVAELIMEEQRLEFIRLMQVQEDDVILLTAGEHQKACSLLGKLRLE 452

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   E+  + ++ AH+PFT P      L   +
Sbjct: 453 CADLLEKKGVVLRDPALFSFLWVVDFPLFLPKEDNPRELESAHHPFTAPHPSDIHLLYTE 512

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +++  YDLV NG EI  G IR H +E+     + +      +      L +A   G 
Sbjct: 513 PEKVRSQHYDLVLNGSEIGGGSIRIHNAELQHYVLATLLKEDVKL---LSHLLQALDYGA 569

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGGIA G+DR++ L+ G+ ++R+V  FP S    DL+  +P  V  E L+   +++
Sbjct: 570 PPHGGIALGLDRLMCLVTGSPSIRDVIAFPKSFRGHDLMSSAPDCVPPEDLKPYHIQV 627


>gi|194210315|ref|XP_001493136.2| PREDICTED: aspartyl-tRNA synthetase 2, mitochondrial [Equus
           caballus]
          Length = 652

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 192/598 (32%), Positives = 312/598 (52%), Gaps = 25/598 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD +G+ Q+V   D +   + K 
Sbjct: 48  RTNTCGELRSSHLGQEVTLFGWIQYRRQN---TFLVLRDFHGLIQLVIPQDESAASVKKI 104

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 105 LCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNSCKKLPFEIKDFVKKT 164

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 165 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKKTPGGAKEF 224

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 225 VVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 282

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I + +E +L+  +    + + V   F  + + +A+  YGTDKPD R  + + 
Sbjct: 283 MSFVDQTGIQSLIEGLLQYSWPR--DKDPVVVPFPSMTFAEALATYGTDKPDTRFGMKIV 340

Query: 301 NVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F ++E R    +LS      +   IP       R   + + + A       +  +
Sbjct: 341 DISDVFRNTEVRFLQDVLSKPKGTVKAIRIPEGAKYLKRKDIESIRKVAADHFNQEVLPV 400

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F +     N     PVA+ +    +  +   +++Q+ D     AG+  K CS     R  
Sbjct: 401 FLKASRHWN----SPVAEFILEKQSLELIRLMELQEEDVILLTAGEHRKACSLLGKLRLE 456

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE   +++ AH+PFT P      L   +
Sbjct: 457 CADLLEARGVVLRDPALFSFLWVVDFPLFLPKEENPGELESAHHPFTAPHPSDIQLLYTE 516

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +++  YDLV NG EI  G IR H +E+     + +      +      L +A   G 
Sbjct: 517 PEKVRSQHYDLVLNGSEIGGGSIRIHDAELQRYILATLLKEDVKL---LSHLLQALDYGA 573

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGGIA G+DR++ L+ GA ++R+V  FP S    DL+  +P ++  E+L+   +R+
Sbjct: 574 PPHGGIALGLDRLICLVTGAPSIRDVIAFPKSFRGYDLMSNAPDSIPPEELKPYHIRV 631


>gi|296229763|ref|XP_002760400.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Callithrix
           jacchus]
          Length = 645

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 191/609 (31%), Positives = 315/609 (51%), Gaps = 26/609 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD +G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFHGLVQVIIPQDESAASVRKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPMESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFMKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 226

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 227 LVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 284

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I + +E +L+  +   ++ N V   F  + + +A+  YGTDKPD R  + + 
Sbjct: 285 MSFVDQTGIQSLIEGLLQYSW--PNDKNPVVVPFPSMTFAEALATYGTDKPDTRFGMKII 342

Query: 301 NVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F ++E       LS      +   IP       R   + + +++       +  +
Sbjct: 343 DISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYFKRKDIESIRKFSADHFDQEILPV 402

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F   + + N     PVA  +  +  + +   ++ Q+ D     AG+  K CS     R  
Sbjct: 403 FLNTNRNWN----SPVANFIMELKRQELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLE 458

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE  + ++ AH+PFT P      L   +
Sbjct: 459 CADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTE 518

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +++  YDLV NG EI  G IR H +E+     + +      +      + +A   G 
Sbjct: 519 PKKVRSQHYDLVLNGNEIGGGSIRIHNAELQQYILATLLKEDVKL---LSHMLQALDYGA 575

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV- 592
           PPHGGIA G+DR++ ++ G+ ++R+V  FP S    DL+  +P ++  E+L+   +++  
Sbjct: 576 PPHGGIALGLDRLICVVTGSPSIRDVIAFPKSFRGHDLMSNTPDSIPPEELKPYHIQVSW 635

Query: 593 ENPKKILKI 601
               K  K 
Sbjct: 636 PTDSKAAKA 644


>gi|77627987|ref|NP_001029315.1| aspartyl-tRNA synthetase, mitochondrial precursor [Rattus
           norvegicus]
 gi|115502848|sp|Q3KRD0|SYDM_RAT RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; Flags:
           Precursor
 gi|76779332|gb|AAI05775.1| Aspartyl-tRNA synthetase 2 (mitochondrial) [Rattus norvegicus]
 gi|149058269|gb|EDM09426.1| aspartyl-tRNA synthetase 2 (mitochondrial) [Rattus norvegicus]
          Length = 652

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 200/611 (32%), Positives = 317/611 (51%), Gaps = 25/611 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++CG+L  S +G  V L GW+   R +    FL +RD +G+ Q++   D +   + ++
Sbjct: 49  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDCHGLVQILIPQDESAASVRRT 105

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +     E V+ + G V++R     N  + TG+IE+ A+  E+L+  ++LP  +    +  
Sbjct: 106 LCEAPVESVVRVSGTVIARPLGQENPKMPTGEIEIKAKTAELLNACKKLPFEIKDFVKKT 165

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 166 EALRLQYRYLDLRSSQMQHNLRLRSQMVMKMREYLCTLHGFVDIETPTLFKRTPGGAKEF 225

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 226 LVPSR-EPGRFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 283

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I + +E +L   + E  + + +   F  + + +A+  YGTDKPD R  + + 
Sbjct: 284 MSFVDQTGIQHLVEGLLHYSWPE--DKDPLVAPFPSMTFAEALATYGTDKPDTRFGMKIV 341

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF-CDRMNEWARSQGQPGLAYI 359
           ++++ F ++E R     L+   G        +G    R    + + ++A       +  I
Sbjct: 342 DISDVFRNTEIRFLQDALAKPQGTVKAICVHEGAKYLRKEDIEFIRKFAAHHFSQEVLPI 401

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F    ++       P AK +       +   +++Q+ D     AG   K CS     R  
Sbjct: 402 FLNARKN----WSSPFAKFITEEERLELTRLMEIQEDDMVLLTAGQHEKACSLLGKLRLE 457

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE   +++ AH+PFT P  G   L   +
Sbjct: 458 CADLLETRGLALRDPALFSFLWVLDFPLFLAKEESPTELESAHHPFTAPHPGDIHLLYTE 517

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              ++   YDLV NG EI  G IR H +   LQ +    + KE V+     L +A   G 
Sbjct: 518 PEKVRGQHYDLVLNGNEIGGGSIRIHDA--QLQRYILETLLKEDVK-LLSHLLQALDYGA 574

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR+V L+ GA ++R+V  FP S    DL+  +P TVS E L+   + +  
Sbjct: 575 PPHGGIALGLDRLVCLVTGAPSIRDVIAFPKSYRGHDLMSNAPDTVSPEDLKPYHIHVSW 634

Query: 594 NPKKILKISVT 604
                 + S T
Sbjct: 635 PTDSEERASAT 645


>gi|301093825|ref|XP_002997757.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262109843|gb|EEY67895.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 653

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 221/639 (34%), Positives = 332/639 (51%), Gaps = 55/639 (8%)

Query: 4   YRTHSCGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           +RTHSCG+L      G  V LSGWV  +RP G I FL +RD YG+TQ+V   D   +  +
Sbjct: 22  FRTHSCGELRQEPHEGQRVTLSGWVDAIRPFGPISFLSLRDRYGVTQLVLEKDFLQSSSD 81

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +   +R E V+   G+V +R A   N  + TG +E+  ++I  L+    LP+ V    E 
Sbjct: 82  VVSKIRPESVVQASGVVRARPANMRNDKMATGAVEVVVEEITELNSCVNLPIQVATGSEV 141

Query: 121 -PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E  R ++R+LDLRR  L +N+V R++I  + R  + +E F+E  TP L  S+PEGAR+
Sbjct: 142 ANEDTRLRHRYLDLRRSALQQNLVVRSKISLAARNFLSSEGFLEIETPTLFKSTPEGARE 201

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP+R   G FYAL Q+PQQYKQLLM  G D+YFQ+A C+RDE  R+DR P EF Q+D+
Sbjct: 202 FLVPTRT-TGQFYALTQSPQQYKQLLMVGGLDKYFQLARCYRDEGGRADRQP-EFTQIDL 259

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           EMSFV ++D+++ ME +++ +++  S        F+R+ +D+A+ R+G DKPD R  I +
Sbjct: 260 EMSFVTREDVMHLMERLVKEIWKAASK-ELPDRPFVRMPFDEAMHRFGVDKPDTRYGIEL 318

Query: 300 HNVTEHFVHSEFRVFSKILSVN------PGYEVWAIPAKG---GGGNRAFCDRMNEWARS 350
            +V +     EF  F   L             V AI AK    GG +R   D + + A+ 
Sbjct: 319 KDVDDLLQECEFAPFKTALLNKNTKIHSKRGVVRAINAKSLATGGFSRKDVDELEKTAKR 378

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
             + G   +    D+         +AK L+    E +  RLD ++GD   F AG   +  
Sbjct: 379 TSKTGAFVVKVEADK----KWKSSLAKKLSASEMEQLNERLDAEEGDVLIFSAGSYHEVN 434

Query: 411 SFAADARNHIAQEL-------GIINCNCFEFCWIMDFPFYEWNEEEKK----------ID 453
           +     R +++Q L         ++ N F   W++DFP +E +E++            + 
Sbjct: 435 TLLGRLRTYMSQLLYAKGFLQQELDPNNFHHLWVIDFPMFERSEDDDGNILESGDKVALS 494

Query: 454 FAHNPFTMPQGGMESLKGN------------DLL------SIKAFQYDLVCNGFEIASGG 495
             H+PFT P+                     D         I A  YD+VCNG+E+  G 
Sbjct: 495 ATHHPFTAPRPDHAVALDEILAKAGDKSLLEDPEVAEKLLEITAQHYDIVCNGWELGGGS 554

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           IR H +++    F +V     +    F  L +A   G PPHGGIA G+DR+V +L GA +
Sbjct: 555 IRIHQAKLQQAVFEDVLELPTLQRQSFEHLLQALSHGAPPHGGIALGLDRLVAILCGAPS 614

Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +R+V  FP S    +L+  +P  V  +QL E  +++ E 
Sbjct: 615 LRDVIAFPKSSTGNELMTNAPGPVLPQQLEEYHIQVNEE 653


>gi|3549678|emb|CAA20589.1| putative aspartate--tRNA ligase [Arabidopsis thaliana]
 gi|7270325|emb|CAB80093.1| putative aspartate--tRNA ligase [Arabidopsis thaliana]
          Length = 636

 Score =  513 bits (1321), Expect = e-143,   Method: Composition-based stats.
 Identities = 210/599 (35%), Positives = 314/599 (52%), Gaps = 48/599 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG+L V+DVG  V L GWV   R HGG+ FL++RDH GI QV   PD       + 
Sbjct: 75  RTELCGELSVNDVGKRVHLCGWVALHRVHGGLTFLNLRDHTGIVQVRTLPDEFPEAHGLI 134

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-----VFGE 117
             +R E+V+ ++G V SR  E++N  + TG +E+ A+ +EIL+                +
Sbjct: 135 NDMRLEYVVLVEGTVRSRPNESVNKKMKTGFVEVVAEHVEILNPVRTKLPFLVTTADENK 194

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEG 176
               E IR ++R LDLRR  +  NIV R  ++  +R  +   + FIE             
Sbjct: 195 DLIKEEIRLRFRCLDLRRQQMKNNIVLRHNVVKLIRRYLEDRHGFIE------------- 241

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                       G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF Q
Sbjct: 242 -----------SGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQ 289

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LDMEM+F+  +D+L   E+++R VF E      + + F R+ Y DA+ RYG+D+PD R  
Sbjct: 290 LDMEMAFMPMEDMLKLNEDLIRKVFSEIKGIQ-LPDPFPRLTYADAMDRYGSDRPDTRFD 348

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR---AFCDRMNEWARSQGQ 353
           + + +V    + S   VF++ L      +V  +P      +       D  NE  +S G 
Sbjct: 349 LELKDV----ILSTSWVFTEALESGGIIKVLCVPLGAKKYSNSALKKGDIYNEAMKS-GA 403

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GL ++  ++ ++G + G+  +   L+         +     GD   F  G         
Sbjct: 404 KGLPFL--KVLDNGEIEGIAALVSSLDSAGKINFVKQCGAAPGDLILFGVGPVTSVNKTL 461

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
              R  +A ++ +I+ +     W+ DFP +EWNE E++++  H+PFT P+         D
Sbjct: 462 DRLRLFVAHDMDLIDHSKHSILWVTDFPMFEWNEPEQRLEALHHPFTAPKPEDMD----D 517

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           L S +A  YD+V NG EI  G +R +  +V  +    +GIS E  E++FG L  A   G 
Sbjct: 518 LPSARALAYDMVYNGVEIGGGSLRIYKRDVQEKVLEIIGISPEEAESKFGYLLEALDMGA 577

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           PPHGGIA G+DR+VM+L GA ++R+V  FP +      L  +PS V  +QL++L +R  
Sbjct: 578 PPHGGIAYGLDRMVMMLGGASSIRDVIAFPKTTTAQCALTRTPSEVDPKQLQDLSIRTK 636


>gi|301763160|ref|XP_002917005.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Ailuropoda
           melanoleuca]
          Length = 653

 Score =  513 bits (1321), Expect = e-143,   Method: Composition-based stats.
 Identities = 192/614 (31%), Positives = 315/614 (51%), Gaps = 25/614 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +   IFL +RD +G+ QVV   + +   + K 
Sbjct: 49  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---IFLVLRDFHGLVQVVIPQEESAAAVRKI 105

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  V    +  
Sbjct: 106 LCEAPVESVVQVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNSCKKLPFEVKDFVKKT 165

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 166 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 225

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           ++PSR   G FY LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 226 VIPSR-EPGKFYCLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 283

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I   +E +L+  +   ++ + +   F  + + +A+  YGTDKPD R  + + 
Sbjct: 284 MSFVDQTGIQRLIEGLLQYSW--PNDKDPLVVPFPSLTFAEALASYGTDKPDTRFGMKII 341

Query: 301 NVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F ++E       LS      +   I        R   + + ++A       +  +
Sbjct: 342 DISDVFRNTEVGFLQDALSKPQGTIKAICISEGTKYLKRKDLESIRKFAADHFNQEVLPV 401

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F +   + N     PVA+ +       +   +++++ D     AG+  K CS     R  
Sbjct: 402 FPKASRNWN----SPVAQSILEEQGSELIRLMEIREDDVVLLTAGEHKKACSVLGKLRLE 457

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE   +++ AH+PFT P      L   +
Sbjct: 458 CADLLEARGLVLRDPALFSFLWVVDFPLFLPKEENPGELESAHHPFTAPHPSDIQLLYTE 517

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +++  YDLV NG EI  G IR H +E+    +    + KE V+     L +A   G 
Sbjct: 518 PEKVRSLHYDLVLNGSEIGGGSIRIHDAELQ--RYILATLLKEDVK-LLSHLLQALDFGA 574

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR++ L+ GA ++R+V  FP S    DL+  +P ++  E+L+   +++  
Sbjct: 575 PPHGGIALGLDRLICLVTGAPSIRDVIAFPKSFRGHDLMSNAPDSLPPEELKPYHIQVSW 634

Query: 594 NPKKILKISVTTIL 607
                 + S     
Sbjct: 635 PADSEAEKSSLNQP 648


>gi|138896140|ref|YP_001126593.1| aspartyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|134267653|gb|ABO67848.1| Aspartyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 453

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 179/460 (38%), Positives = 268/460 (58%), Gaps = 7/460 (1%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           + + +  R ++  ++R  +  E F+E  TP+LT S+PEGARD+LVPSRV+ G FYALPQ+
Sbjct: 1   MFQTLELRHKVAKAVRNFLDGERFLEVETPMLTKSTPEGARDYLVPSRVHPGEFYALPQS 60

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           PQ +KQLLM  GF+RY+QI  CFRDED R+DR P EF Q+D+EMSFV+Q+DI++  E ++
Sbjct: 61  PQIFKQLLMVGGFERYYQITRCFRDEDLRADRQP-EFTQIDIEMSFVDQEDIIDLTERMM 119

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
             V +     +     F RI YD+A+ RYG+DKPD+R  + + +V+E    S F+VF++ 
Sbjct: 120 AAVVKATKGIDI-PRPFPRITYDEAMSRYGSDKPDVRFGLELVDVSEAVRGSAFQVFARA 178

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAK 377
           +      +   +       +R   D + E+A   G  GLA++     E G +   GP+AK
Sbjct: 179 VEQGGQVKAINVKGAASRYSRKDIDALAEFAGRYGAKGLAWLKV---EGGELK--GPIAK 233

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
                   A+R  L  +DGD   F+A +     +     R  + +ELG+I+     F W+
Sbjct: 234 FFVDDEQTALRQLLAAEDGDLLLFVADEKAIVAAALGALRLKLGKELGLIDETKLAFLWV 293

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
            D+P  E++EEE +   AH+PFTMP      L   +  +++A  YDLV NG+E+  G +R
Sbjct: 294 TDWPLLEYDEEEGRYYAAHHPFTMPVRDDIPLLETNPGAVRAQAYDLVLNGYELGGGSLR 353

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               +V  + F  +G  +E    +FG L  AF+ G PPHGGIA G+DR+VMLL G  N+R
Sbjct: 354 IFERDVQEKMFRALGFDQEEARRQFGFLLEAFEYGTPPHGGIALGLDRLVMLLAGRTNLR 413

Query: 558 EVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +   FP + +   LL  +P  VS +QL+EL L +V   ++
Sbjct: 414 DTIAFPKTASASCLLTEAPGPVSEKQLKELHLAVVLPDQQ 453


>gi|281353847|gb|EFB29431.1| hypothetical protein PANDA_005157 [Ailuropoda melanoleuca]
          Length = 602

 Score =  508 bits (1308), Expect = e-141,   Method: Composition-based stats.
 Identities = 191/598 (31%), Positives = 313/598 (52%), Gaps = 25/598 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +   IFL +RD +G+ QVV   + +   + K 
Sbjct: 8   RTNTCGELRSSHLGQEVTLCGWIQYRRQN---IFLVLRDFHGLVQVVIPQEESAAAVRKI 64

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  V    +  
Sbjct: 65  LCEAPVESVVQVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNSCKKLPFEVKDFVKKT 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 125 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 184

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           ++PSR   G FY LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 185 VIPSR-EPGKFYCLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 242

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I   +E +L+  +   ++ + +   F  + + +A+  YGTDKPD R  + + 
Sbjct: 243 MSFVDQTGIQRLIEGLLQYSW--PNDKDPLVVPFPSLTFAEALASYGTDKPDTRFGMKII 300

Query: 301 NVTEHFVHSEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F ++E       LS      +   I        R   + + ++A       +  +
Sbjct: 301 DISDVFRNTEVGFLQDALSKPQGTIKAICISEGTKYLKRKDLESIRKFAADHFNQEVLPV 360

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F +   + N     PVA+ +       +   +++++ D     AG+  K CS     R  
Sbjct: 361 FPKASRNWN----SPVAQSILEEQGSELIRLMEIREDDVVLLTAGEHKKACSVLGKLRLE 416

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE   +++ AH+PFT P      L   +
Sbjct: 417 CADLLEARGLVLRDPALFSFLWVVDFPLFLPKEENPGELESAHHPFTAPHPSDIQLLYTE 476

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +++  YDLV NG EI  G IR H +E+    +    + KE V+     L +A   G 
Sbjct: 477 PEKVRSLHYDLVLNGSEIGGGSIRIHDAELQ--RYILATLLKEDVK-LLSHLLQALDFGA 533

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGGIA G+DR++ L+ GA ++R+V  FP S    DL+  +P ++  E+L+   +++
Sbjct: 534 PPHGGIALGLDRLICLVTGAPSIRDVIAFPKSFRGHDLMSNAPDSLPPEELKPYHIQV 591


>gi|224058910|ref|XP_002190760.1| PREDICTED: aspartyl-tRNA synthetase 2, mitochondrial [Taeniopygia
           guttata]
          Length = 624

 Score =  508 bits (1307), Expect = e-141,   Method: Composition-based stats.
 Identities = 204/608 (33%), Positives = 304/608 (50%), Gaps = 26/608 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEI 61
           RT++CG+L  + VG  V L GWV   R  G  +FL +RD  G+TQVV   D       E+
Sbjct: 29  RTNTCGELRAAHVGQKVTLYGWVQYQR-QG--LFLVLRDFQGLTQVVIPQDEAHSHVKEL 85

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             +   E V+ + G V  R     N  + TG IE+ A+  EIL+  ++LP  +    +  
Sbjct: 86  LSNAPVESVVRVTGTVSPRPLGQENPKMPTGDIEVKAESAEILNSCKKLPFEIKDFIKKS 145

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   L   +  R+R++  MR  +     F++  TP L   +P GA++F
Sbjct: 146 EALRMQYRYLDLRSSRLQNALRLRSRVVMRMREYLCNLHGFVDVETPTLFKRTPGGAKEF 205

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 206 LVPSR-EAGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 263

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I   +E +L+  + E          F  + Y++A+  YGTDKPD R  + + 
Sbjct: 264 MSFVDQAGIQRLIEGLLQHSWPEERGSIMTP--FPSMTYEEALAGYGTDKPDTRFGMKIM 321

Query: 301 NVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++    S  +     LS          IP           + + E A+SQ    +  I
Sbjct: 322 DISDVLRGSNIQFLQNALSYPHGSIRAICIPQGVRYLTNKDLESLKESAKSQFNQEIMEI 381

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R D     +    + K L       +   L+MQ+GD     AG+  + CS     R  
Sbjct: 382 IRRPDG----SLKSLLTKFLGEKEQSELIQALNMQEGDVVLLAAGEHKQVCSALGALRLL 437

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +    E   +++ AH+PFT P     SL  +D
Sbjct: 438 SANLLEAAGLALRDPTAFHFLWVVDFPLFLPKAENPTELESAHHPFTAPHPSDVSLLYSD 497

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +++  YDLV NG E+  G IR H +E        V      V      L  A + G 
Sbjct: 498 PTKVRSQHYDLVLNGNEVGGGSIRIHSAEQQRFVLEKVLKEDSEV---LSHLIEALEFGA 554

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV- 592
           PPHGGIA G+DR++ L++ A ++R+V  FP S    D++  +P  V+ E+L    +++  
Sbjct: 555 PPHGGIALGLDRLISLIVDAPSIRDVIAFPKSFRGRDVMGNAPDYVTPEELEPYHIQVSW 614

Query: 593 ENPKKILK 600
              +K  K
Sbjct: 615 PLEEKEAK 622


>gi|226227121|ref|YP_002761227.1| aspartyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226090312|dbj|BAH38757.1| aspartyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 593

 Score =  508 bits (1307), Expect = e-141,   Method: Composition-based stats.
 Identities = 218/595 (36%), Positives = 317/595 (53%), Gaps = 20/595 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEI 61
           RT +CG L  +DVG  VRL GWVHR R  GG++F+D+RD  G+ Q+   P    +     
Sbjct: 7   RTDTCGLLRRADVGRTVRLGGWVHRSRDLGGLVFIDLRDRTGLVQLAFGPAWTAAEVQHA 66

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF---GER 118
           A ++  E V+  +G V++R A+ +N ++ TG++E+    I ++  A    LPV    G++
Sbjct: 67  AAAIGVESVVLCEGEVVAREADRVNPDMGTGEVEVRVTSIRVVGPAVTPALPVARGRGDK 126

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R ++R+LDLRR  L  N+V R R++   R  +    ++E  TPILT  +PEGAR
Sbjct: 127 MPAEELRLRHRYLDLRRPELQDNLVLRHRLMQVTRRFLSDRGYLELETPILTKPTPEGAR 186

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV+ G FYALPQ+PQ YKQL M  G+DRYFQIA CFRDED R+DR P EF Q+D
Sbjct: 187 DYLVPSRVHPGEFYALPQSPQIYKQLFMCCGYDRYFQIARCFRDEDLRADRQP-EFTQID 245

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+E++DIL   + ++  +++E   G+ +   F R+ Y DA+ +YG D+PDLR  ++
Sbjct: 246 IEASFIEREDILTMAQGLIGALWKE--AGHDIPAQFERMSYADAMEQYGCDRPDLRYGLV 303

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + + +  F   +F V +  L+         IP  G   +R   D +   A+  G  GL  
Sbjct: 304 LRDYSSVFAGLDFAVTNAALAAGARVRGVVIP-GGAAWSRKQVDELEALAKGAGAGGLLR 362

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +             GP+AK L      A      + DGD   F+A             R 
Sbjct: 363 LRMADGA-----YDGPLAKFLTDDAKAAFA----LTDGDLALFVAAADHVSSPALDRVRQ 413

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
             A+ L I++     F  +MDFP +E +     +   H+PFT           ++    +
Sbjct: 414 ECARRLEIVDDKAQRFLIVMDFPMFEKDPVTGALAAVHHPFTASHPEDMQAYPDEPARWR 473

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN-RFGGLYRAFQCGMPPHG 537
           A  YD+V NG E+  G IR     V  + FS +GI     +  RFG L    + G PPHG
Sbjct: 474 ALAYDVVLNGTELGGGSIRTSDPAVQSRMFSLLGIGSTEEQERRFGFLLEGLRAGAPPHG 533

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GIA G DRI MLL GA ++R+V  FP +     L  G+P  V  + LREL + + 
Sbjct: 534 GIAFGFDRIAMLLSGATSLRDVIAFPKTTAARSLFEGAPVAVPADDLRELHIAVR 588


>gi|322434280|ref|YP_004216492.1| aspartyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321162007|gb|ADW67712.1| aspartyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 607

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 229/610 (37%), Positives = 329/610 (53%), Gaps = 38/610 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62
           RTH CGDL  ++ G  V L GWV+R R HG +IFLD+RD  GITQ+V + +        A
Sbjct: 11  RTHMCGDLRAANDGQPVVLMGWVNRRRDHGNLIFLDVRDRTGITQIVLDKERGAAAHLKA 70

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +S R E+V+   G V  R A+  N  + TG IE+ A ++ +L+ A+  P     +    E
Sbjct: 71  ESARPEFVVAAVGQVRLRDADLRNPKMPTGDIEVVATELLLLNDAKTPPFSPAEDAIANE 130

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLRR  +  N   R  +  ++R  +  + F+E  TP +T S+PEGARD+LV
Sbjct: 131 EVRLKYRYLDLRRPEMQHNFRLRHEVARAIRNYLSDDGFLEIETPFMTRSTPEGARDYLV 190

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV+ G FYALPQ+PQ +KQ+LM SGFD+YFQIA CFRDED R+DR P EF Q+D+E +
Sbjct: 191 PSRVHAGEFYALPQSPQIFKQILMVSGFDKYFQIARCFRDEDLRADRQP-EFTQIDLETT 249

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+ I   +E  L   F+  +   T+   F+++ YD+AIR YG DKPD+R P  M ++
Sbjct: 250 FPSQERIFRIVEGFLTAAFK--AANITLQPPFVQMTYDEAIRHYGIDKPDMRLPA-MTDL 306

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T+              ++      + IP+ G          + E     G+ GL ++   
Sbjct: 307 TDTVTPDLRTQLKIEQAL--PILGFVIPSAGTLSGTQKRSLIEEIRTFFGETGLDFLD-- 362

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG----------DPLKFCSF 412
           +          P+A         AI   +   + D    I            DP      
Sbjct: 363 VARLKTNETFAPLA--------AAIADEMKPAEADLVVVITPKLGTPERWNYDPQWIYKK 414

Query: 413 AADARNHIAQEL----GIIN----CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
               R  +A++     G+         ++FCW+ DFP YEW+EE K    AH+PFT P  
Sbjct: 415 VGALRLELAKKFADKHGLFKQTGTAADYKFCWVTDFPMYEWDEEAKVWQAAHHPFTSPHE 474

Query: 465 GMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
              +     +D  +++A  YD+V NG E+ SG IR H  +V  + F ++G+S E  + RF
Sbjct: 475 DDITSGRLVSDKGAVRALAYDIVLNGTELGSGSIRIHRKDVQAEIFRSLGMSDEEQKARF 534

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           G    A + G PPHGGIA G+DRIVM+L GA ++REV  FP +    DL++ +P+ VS +
Sbjct: 535 GFFLDALEYGTPPHGGIALGLDRIVMILAGATSLREVIAFPKTARAIDLMVDAPTPVSDQ 594

Query: 583 QLRELGLRIV 592
           QLR+L LR V
Sbjct: 595 QLRDLSLRTV 604


>gi|262340803|ref|YP_003283658.1| aspartate-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272140|gb|ACY40048.1| aspartate-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 567

 Score =  507 bits (1305), Expect = e-141,   Method: Composition-based stats.
 Identities = 206/588 (35%), Positives = 304/588 (51%), Gaps = 21/588 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YRTH+CG+L   D+G  V LSGW+ + R  G + F+DIRD++GITQ++ + +       
Sbjct: 1   MYRTHNCGELCKKDIGKEVVLSGWIQKKRNLGSLCFIDIRDYFGITQLIFSKNLI---EK 57

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +  E+++ I G V+ R ++  N NI TG+IE+S  +IEIL+ +   P  +  + +  E
Sbjct: 58  FFLGKEFLIKIQGKVVERISK--NNNIPTGEIEISVSQIEILNSSLPTPFTIENQTDGNE 115

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LD+RR+ +  N++ R  +   +R  +    F+E  TP+L   +PEGAR F+V
Sbjct: 116 EIRMKYRYLDIRRNPIKNNLIIRHNLALEIRNFLSQNGFLEIETPVLINYTPEGARSFVV 175

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + G FYAL Q+PQ +KQLLM  G D+YFQI  CFRDED RSDR   EF Q+D EMS
Sbjct: 176 PSRTHVGKFYALAQSPQLFKQLLMIGGIDKYFQIVKCFRDEDARSDRQI-EFTQIDCEMS 234

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FVE DD+L   EN ++ +F    N    S  F  I Y DA++ YGTD PD+R  +    +
Sbjct: 235 FVEVDDVLIFFENFIKHLFRRIKNIQLES--FPCISYSDAMKMYGTDSPDIRFGMPFIEL 292

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
                        +   +        I            D+MN   +    P + +I + 
Sbjct: 293 NNLVQKKNISFLKEQELI------IGIKVPKC---HKNHDQMNSLFKKIENPNIFWIQYL 343

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            ++      +       +               GD  F   G            R  IA 
Sbjct: 344 SNK----TLLSSNPDFFSEEIITIFINHFQAVPGDLLFISYGKRKNTRKTLGKVRLEIAN 399

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L + N   F+  W+ D P  EW+E  K+    H+PFT P+     L      +I++  Y
Sbjct: 400 HLNLKNSKIFKPLWVTDLPLLEWDERSKRYKSVHHPFTSPKKEDIHLLEKYPENIRSQSY 459

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL+ NG EI SG IR H   +    F ++G+S + +E+ FG   ++F+ G PPHGGIA G
Sbjct: 460 DLIINGIEIGSGSIRIHNQNIQNLIFKHLGLSAKEIESEFGFFIKSFEYGTPPHGGIAFG 519

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           +DR++ LL G  +++    FP S    DL+  +PS +  E+L+EL LR
Sbjct: 520 LDRLINLLEGNDDIKNFIAFPKSNYGEDLMTKAPSFLKKEKLKELHLR 567


>gi|319760578|ref|YP_004124516.1| aspartyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039292|gb|ADV33842.1| aspartyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 576

 Score =  506 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 201/581 (34%), Positives = 318/581 (54%), Gaps = 14/581 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           RT  CG L  + +G  + L GW+ ++R  G ++F+++RD  G  QV  +P+     C   
Sbjct: 2   RTAYCGQLNSAHIGLEITLCGWISKLRNLGKLMFIELRDREGSIQVCFDPNFQQEVCKNA 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           + S++ E+ + + G+V +R    IN N++TG IE+ A+   IL+V+E   LP+   +   
Sbjct: 62  SISLKQEFCIQLRGIVRARPITQINKNMLTGMIEIVAKFFVILNVSEP--LPLDITKNNT 119

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E  R KYR+LDLRR  +  NI  R+R+++     M  E F    TPILT S+PEGARD+L
Sbjct: 120 EENRLKYRYLDLRRPIMLLNIKTRSRVMSLTHRFMELEGFFNIDTPILTKSTPEGARDYL 179

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR++    YALPQ+PQ +KQLLM +GFDRY+QI  CFRDED RSDR P EF Q+DME 
Sbjct: 180 VPSRLHIDKKYALPQSPQIFKQLLMIAGFDRYYQITKCFRDEDLRSDRQP-EFTQIDMEA 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF++   I   ME  +  V+ E  N       F +I Y D++RR+G+D PDLRNPI + +
Sbjct: 239 SFIDAKRIRELMEFFICTVWREILNIE--LGVFPQISYFDSMRRFGSDTPDLRNPIEIVD 296

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIP--AKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           V++ F     +     + ++       +     G        ++  ++ R  G     +I
Sbjct: 297 VSDFFRSIWNQFLLNKIMIDIAVNQVIVMKIPNGYFLTDKQINKYEDYIRRCGIQNFYWI 356

Query: 360 FWRLDESGNV-AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK--FCSFAADA 416
             + ++   +    GP+ K LN +  +A+  +++ +     FF+ G+             
Sbjct: 357 KAQCNDQKEIVKVDGPIVKFLNKIILKALFKKINFKHNGVLFFVFGNNKNLFITKILGSL 416

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R  I  +L +I  + +   W+++FP ++ NE    +   H+ FT P+        N+ L 
Sbjct: 417 RQKIGSDLNLIKKDTWAPLWVVNFPVFKKNEL-GSLIPVHHMFTAPKNCDIEFLKNNPLL 475

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  YD+V NG+EI SG +R H   +    F  +GIS+   + +FG L  A + G PPH
Sbjct: 476 AVSEAYDMVINGYEIGSGSVRIHSYLLQQTIFDILGISRSTQQKKFGCLMNALKYGAPPH 535

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
            G+A G+DR++MLL G+K++R+V  FP + +  DL++ +P 
Sbjct: 536 AGLAFGLDRLLMLLTGSKSIRDVIAFPKTTSAIDLMVDAPD 576


>gi|71892229|ref|YP_277962.1| aspartyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|97196544|sp|Q492L1|SYD_BLOPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71796335|gb|AAZ41086.1| aspartyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 574

 Score =  504 bits (1298), Expect = e-140,   Method: Composition-based stats.
 Identities = 196/579 (33%), Positives = 309/579 (53%), Gaps = 12/579 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT  CG L +S VG  V L GW+++ R  GG+IF+D+RD  G  QV  +   +      A
Sbjct: 2   RTAYCGQLNLSHVGLEVTLCGWINKYRNFGGLIFIDLRDREGCIQVCFDVYQNKEVCISA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             ++ E+ + + G+V +R    IN+NI TG +E+ A+K  IL++++   LP+   +   E
Sbjct: 62  AKLKQEFCIQLIGMVRARPKNQINSNISTGAVEVVAKKFSILNISDP--LPLDISKNNIE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  +   I  R+RI++ +   M  E F+   TP+LT  +PEG+RD++V
Sbjct: 120 ENRLKYRYLDLRRSIMFDRIKTRSRIMSIVHRFMELEGFLNIETPMLTKVTPEGSRDYIV 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++ G  YALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E S
Sbjct: 180 PSRLHAGKNYALPQSPQIFKQLLMVSGFDRYYQITKCFRDEDLRADRQP-EFTQIDIETS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+    I   ME  +R ++ E  N       F +  Y + ++R+G+D PDLRNPI M +V
Sbjct: 239 FMTTQKIRELMEIFIRIIWREILNVE--LGVFSQFTYSEVMQRFGSDAPDLRNPIEMFDV 296

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +  F  ++ R+     +      +      G    +   D    +++  G   L ++  +
Sbjct: 297 SYLFNSTQNRLSFIRANNIGVQAIAMKVPNGRQLTQKQIDEYIYYSKQCGLKELLWVKVQ 356

Query: 363 LDESG--NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK--FCSFAADARN 418
             ++        G V   ++ +  + I  + +++  D  F    D          +  R 
Sbjct: 357 FSDNDITKKEIQGSVTNFIDNLTLDIILNKTNIKSNDILFVGFNDNKNQFITKMLSALRL 416

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +  +L +I  + +   WI+DFP ++ N    +    H+ FT P+     +   D L + 
Sbjct: 417 KLGNDLCLIKKDSWAPLWIIDFPMFKKNC-HGEYTSMHHMFTSPKNCDVQMLKKDPLLVI 475

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+V NG EI SG  R H  ++    F+ +GI++   + +FG    A + G PPH G
Sbjct: 476 SEAYDMVINGCEIGSGSARIHSFDMQQAVFNILGITQNDQKKKFGYFMDALKYGAPPHAG 535

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
           +A G+DRI MLL G+KN+REV  FP +    D++  +P 
Sbjct: 536 LAFGLDRIAMLLTGSKNIREVIAFPKTTASVDIMANAPD 574


>gi|297281534|ref|XP_001101931.2| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Macaca mulatta]
          Length = 637

 Score =  504 bits (1297), Expect = e-140,   Method: Composition-based stats.
 Identities = 194/600 (32%), Positives = 307/600 (51%), Gaps = 37/600 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD +G+ QVV   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFHGLVQVVIPQDESAASVRKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFMKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS---PEGAR 178
           E++R +YR+LDLR   +  N+  R++++  MR  +            L AS    PEGA+
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCN----------LHASGQMLPEGAK 216

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D
Sbjct: 217 EFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQID 274

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  + 
Sbjct: 275 IEMSFVDQTGIQSLIEGLLQYSW--PNDKDPVVVPFPTVTFTEALATYGTDKPDTRFGMK 332

Query: 299 MHNVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           + ++++ F ++E       LS      +   IP       R   + + ++A       + 
Sbjct: 333 IIDISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQEIL 392

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
            +F   + + N     PVA  +       +   +D Q+ D     AG+  K CS     R
Sbjct: 393 PVFLNANRNWN----SPVASFIMESQRLELIRLMDTQEEDVVLLTAGEHNKACSLLGKLR 448

Query: 418 NHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLKG 471
              A  L      + +   F F W++DFP +   EE  + ++ AH+PFT P      L  
Sbjct: 449 LECADLLETRGMVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLY 508

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            +    ++  YDLV NG EI  G IR H +E+     + +      +      L +A   
Sbjct: 509 TEPKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLKEDVKM---LSHLLQALDY 565

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR++ L+ G+ ++R+V  FP S    DL+  +P ++  E+L+   +R+
Sbjct: 566 GAPPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNAPDSIPSEELKPYHIRV 625


>gi|261749101|ref|YP_003256786.1| aspartyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497193|gb|ACX83643.1| aspartyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 574

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 209/591 (35%), Positives = 316/591 (53%), Gaps = 19/591 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH YRTH+CG+L   D+G  V LSGW+ ++R  G +IF+D+RD +GI Q+V +       
Sbjct: 1   MHYYRTHNCGELCKKDIGKKVILSGWIQKIRNLGSLIFIDLRDFFGIIQLVFSKKLINK- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +R E+V+ I G V+ R  ++IN  I TG+IE+   ++EIL+ +  LP  +  + + 
Sbjct: 60  --IELRKEFVIKISGEVIKR--KSINQKIPTGEIEVLVSRLEILNPSIPLPFLIEDQTDG 115

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LD+RR+ +  N++ R  I    R  +    F+E  TP+L   +PEGAR F
Sbjct: 116 DEECRMKYRYLDIRRNPIKNNLILRHEISLETRNFLSKNGFLEIETPVLINQTPEGARSF 175

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR++ G FYALPQ+PQ +KQLLM  G D+YFQIA CFRDED RSDR   EF Q+D E
Sbjct: 176 VVPSRIHSGMFYALPQSPQLFKQLLMIGGIDKYFQIAKCFRDEDARSDRQI-EFTQIDCE 234

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M+FV+  DIL   EN ++ +F++  N    S  F  I Y +++  YGTD PDLR  +   
Sbjct: 235 MAFVDVHDILIFFENFIKHLFKKIKNIELES--FTCISYSNSMDLYGTDSPDLRFGMKFV 292

Query: 301 NVTEHFVHSEFRVF-SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            + E            K L++       +        +    + + E         + +I
Sbjct: 293 KLNEWAQKKGIEFLKKKELTIGINVPKCSHYTCNQIYS--IIEGIREP--KINPEEIFWI 348

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            +  D       +    K L+  N   +      + GD  F I G   K  +  +  R  
Sbjct: 349 KFFTD-----KTILSSKKLLSHENLMKLIKCFKAKPGDLLFIIFGKKRKTRAKLSKLRIE 403

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG-NDLLSIK 478
           +A  L + N   F+  WI+D P  EW+E+ K+    H+PFT P      L    +   I+
Sbjct: 404 MAHHLNLKNPQVFKPLWIIDLPLLEWDEKSKRYKSFHHPFTSPIKEDIHLLDKKNPGYIR 463

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              Y+L+ NG EI  G IR H   +    F ++G S + +E+ FG L +AF+ G PPHGG
Sbjct: 464 TKSYELIINGMEIGGGSIRVHDKNIQDSIFKHLGFSIKDIESEFGFLTKAFEYGTPPHGG 523

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           IA G+DR++ +L G +N+++   FP + +  D ++ +P  +  E+L+EL L
Sbjct: 524 IAFGLDRLITILEGKENIKDFIAFPKNNSGRDTMVNTPYFLKKEKLKELRL 574


>gi|292610800|ref|XP_699804.3| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Danio rerio]
          Length = 660

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 187/599 (31%), Positives = 313/599 (52%), Gaps = 25/599 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+CG+L  S +   V L GWV  +R     +F+ +RD  G+ Q++   D +  E+ KS
Sbjct: 71  RSHTCGELCSSHIDKEVTLCGWVQYLRQ---DLFVILRDFSGLVQILIPQDESKSELKKS 127

Query: 65  V---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +     E V+ + G V+ R     N NI TG+IE+ A+ IE+L+ + +LP  +    +  
Sbjct: 128 LLALTVESVIMVKGRVIRRPEGQENKNISTGEIEVCAESIEVLNTSRKLPFEIKEFVKKS 187

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR  T+  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 188 EALRMQYRYLDLRSATMQNNLRLRSQMVMKMREYLCNLHGFVDVETPTLFKRTPGGAKEF 247

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPS  + G FY+LPQ+PQQ+KQLLM +G DRYFQ+A C+RDE  + DR P EF Q+D+E
Sbjct: 248 VVPS-GDPGKFYSLPQSPQQFKQLLMVAGIDRYFQLARCYRDEGSKPDRQP-EFTQVDIE 305

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  +++ +E +++  + E  +   ++  F  + Y++A+R YG DKPD R  + + 
Sbjct: 306 MSFVDQAGVMSLIEGLVQFSWPE--DKGQINVPFPTLTYEEAMRDYGVDKPDTRFGMKLV 363

Query: 301 NVTEHFVHSEFRVFSKIL-SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           +V+  F  ++       L       +   +P           + + + A++Q    ++ +
Sbjct: 364 DVSTAFQGAQIEFIKDALLEPEGCVQAICVPEGTKHLKGKDFEFLKQAAKTQYGQEVSVV 423

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R D     +   P+++ L+    + +        GD  F  AG            R  
Sbjct: 424 PVRADG----SLKSPLSRLLSDTAKQQLLQMAQANAGDLIFITAGPRENVRPLLGKLRLQ 479

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473
           +A+ L      + + + F F W++DFP +   E++ ++++ AH+PFT P      L    
Sbjct: 480 VAELLERYGVPVRDPSVFHFLWVVDFPLFLPKEDDPERLESAHHPFTAPVPEDAHLLYTR 539

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              ++   YDLV NG EI  G IR H +   L     +      +      L  A   G 
Sbjct: 540 PHMVRGQHYDLVLNGCEIGGGSIRIHNASQQLYILDTILKEDPSL---LSHLLEALDSGA 596

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           PPHGGIA G+DR+V +++GA ++R+V  FP S    DL+  +P  VS + L+   + +V
Sbjct: 597 PPHGGIALGLDRLVSIIVGAPSIRDVIAFPKSFRGHDLMSQAPDFVSEKDLKPYHISVV 655


>gi|154496108|ref|ZP_02034804.1| hypothetical protein BACCAP_00392 [Bacteroides capillosus ATCC
           29799]
 gi|150274663|gb|EDN01727.1| hypothetical protein BACCAP_00392 [Bacteroides capillosus ATCC
           29799]
          Length = 582

 Score =  503 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 256/596 (42%), Positives = 359/596 (60%), Gaps = 25/596 (4%)

Query: 15  SDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             VG  V L+G++   R  G  + F  +RD YG TQVVA  +    +  K++  E  + +
Sbjct: 2   EHVGQTVTLAGFLENFREVGASLGFAVLRDFYGTTQVVAETEEMV-KTIKALNKESTIQV 60

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFL 131
            G+V  R ++  N  + TG IE+  +KIE+L      ELP P+   RE  ES R KYR+L
Sbjct: 61  TGVVRERDSK--NPKLPTGDIEVVPEKIEVLGRCRHNELPFPINRSREADESARLKYRYL 118

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           DLR   +  NIV R ++++++R  M A  F+E +TPILTASSPEGARD+LVPSR + G F
Sbjct: 119 DLRNPEVKNNIVLRCQVVSALRQAMTAHGFMEITTPILTASSPEGARDYLVPSRKHPGKF 178

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           YALPQAPQQ+KQLLMASGFD+YFQIAPCFRDED R DR PGEFYQLDMEM+F +Q+D+  
Sbjct: 179 YALPQAPQQFKQLLMASGFDKYFQIAPCFRDEDARGDRSPGEFYQLDMEMAFADQEDVFT 238

Query: 252 TMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
            +E+VL  +F ++   +T S+  F RI Y +A+  YG+DKPDLR  +   + TE      
Sbjct: 239 VLEDVLPPIFAKYGKYDTASSAPFKRIPYLEAMETYGSDKPDLRIDLTAQDATEALGACG 298

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
           F  F           V A+   G    R   D++   A  + Q G    ++R DE+G + 
Sbjct: 299 FGPFEG-------NTVKAVKVTGFSATRKQIDKL--CADVEVQSGGKVYWFRYDENGEI- 348

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL-GIINC 429
            +G +AK +  +  +A+   L ++ G      AG  L     A      +A       + 
Sbjct: 349 -VGGIAKFVQPI-KDAVVAALGLEKGTFVGLTAGKKLSAQKTAGVLIKMLAPLCPDHFHK 406

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN-----DLLSIKAFQYDL 484
             +EFCWI+DFP YE  EE  +++F HNPF+MP GG+E LK       D LSI AFQYDL
Sbjct: 407 ETYEFCWIVDFPMYEIGEESGELEFCHNPFSMPNGGLEVLKKAAAGEVDPLSITAFQYDL 466

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           VCNG E++SG +RNH  E+M++AF  V + ++ V+++F  +Y AF  G PPH GIA G+D
Sbjct: 467 VCNGVELSSGAVRNHDPEIMIEAFQLVRLGEDDVKSKFPAMYNAFTYGAPPHAGIAPGVD 526

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           R+VMLL G  ++RE+  FPM++N  DL+M +PS V+ +QL EL +   +  ++  +
Sbjct: 527 RMVMLLAGEDSIREIIPFPMNKNAQDLMMNAPSFVTQKQLDELNIVCTKKEEETAE 582


>gi|320105587|ref|YP_004181177.1| aspartyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319924108|gb|ADV81183.1| aspartyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 604

 Score =  502 bits (1293), Expect = e-140,   Method: Composition-based stats.
 Identities = 230/610 (37%), Positives = 330/610 (54%), Gaps = 36/610 (5%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS--VR 66
           CGDL  +  G  V L GWV+R R HG ++FLD+RD  GITQVV +   +   +AK+   R
Sbjct: 2   CGDLRSAHAGQSVILMGWVNRRRDHGDLVFLDLRDRSGITQVVVDKSESTEALAKAEAAR 61

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E+V+   G V  R A   N N+ TG IE+   ++ +LS A+  P     +    E +R 
Sbjct: 62  PEFVVAAIGTVRQRIAGLENPNMPTGDIEVVVSELLLLSDAKTPPFSPAEDAIVNEELRL 121

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           +YR+LDLRR  +  N + R ++  ++R ++ +E F+E  TP+LT S+PEGARD+LVPSRV
Sbjct: 122 QYRYLDLRRPEMQANFLMRHKVAQAIRGQLSSEGFLEIETPMLTRSTPEGARDYLVPSRV 181

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           + G+FYALPQ+PQ +KQ+LM  GFDRYFQIA CFRDED R+DR P EF Q+D+E+SF  Q
Sbjct: 182 HPGTFYALPQSPQIFKQILMVGGFDRYFQIARCFRDEDLRADRQP-EFTQIDLEISFPTQ 240

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           + +    E  L   F   +   T+   F R+ YD AI +YG DKPD+R P  M  +TE  
Sbjct: 241 ETVFGVAERFLTAAFA--AANVTIPTPFPRMTYDQAITKYGIDKPDMRLPH-MAELTEVL 297

Query: 307 VHSEFRVFSKILSVNP--GYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL-------- 356
                    + L + P      + IP  G     A    ++E     G  GL        
Sbjct: 298 T----PELRESLRIEPALPVFGFVIPNVGELSGTARKSLLSEIRAFFGDSGLDALDITRL 353

Query: 357 ----AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
               A++    +E G+      +A + N   T  + V +  + G    +   D       
Sbjct: 354 RTSEAFVPL-AEEIGSHLNATTIAFNGNSFTTNDLAVVITPKLGTPALWNF-DRQWIPKR 411

Query: 413 AADARNHIAQEL----GIINC----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
               R  +A++      + +     + + F W+ DFP YE+NEE+K  D AH+PFT P  
Sbjct: 412 IGALRIELAKKFADKHKLFDKTGTADDYRFLWVTDFPMYEFNEEKKTWDAAHHPFTSPHE 471

Query: 465 GMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
                    ND  S++A  YD+V NG E+ SG IR H  +V  + F ++G++ E    RF
Sbjct: 472 DDIKSGALYNDKGSVRALAYDVVLNGLELGSGSIRIHRKDVQSEIFRSLGMTDEEARERF 531

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           G    A + G PPHGGIA G+DRIVMLL GA ++REV  FP +    DL++ +PS  + +
Sbjct: 532 GFFLEALEYGTPPHGGIALGLDRIVMLLAGASSLREVIAFPKTAKAIDLMVQAPSEPTEQ 591

Query: 583 QLRELGLRIV 592
           Q+R+L L+  
Sbjct: 592 QMRDLHLKTA 601


>gi|114565510|ref|XP_001150205.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 6
           [Pan troglodytes]
          Length = 624

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 194/600 (32%), Positives = 307/600 (51%), Gaps = 44/600 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 226

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 227 LVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 284

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  + + 
Sbjct: 285 MSFVDQTGIQSLIEGLLQYSW--PNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMKII 342

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++++ F ++E       LS  P   V AI    G                     +  +F
Sbjct: 343 DISDVFRNTEIGFLQDALS-KPHGTVKAICIPEGAE-------------------ILPVF 382

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
              + + N     PVA  +       +   ++ Q+ D     AG+  K CS     R   
Sbjct: 383 LNANRNWN----SPVANFIMESQRLELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLEC 438

Query: 421 AQELG-----IINCNCFEFCWIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLKGNDL 474
           A  L      + +   F F W++DFP +   EE  + ++ AH+PFT P      L   + 
Sbjct: 439 ADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTEP 498

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
              ++  YDLV NG EI  G IR H +E+     + +      +      L +A   G P
Sbjct: 499 KKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLKEDVKM---LSHLLQALDYGAP 555

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR++ L+ G++++R+V  FP S    DL+  +P +V  E+L+   +R+ + 
Sbjct: 556 PHGGIALGLDRLICLVTGSRSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRVSKP 615


>gi|326924806|ref|XP_003208616.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Meleagris
           gallopavo]
          Length = 618

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 196/598 (32%), Positives = 308/598 (51%), Gaps = 25/598 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++CG+L  + +G  V L GW+   R  G  +FL +RD  G+TQ++   D A   + K 
Sbjct: 23  RTNTCGELRAAHIGQKVTLCGWIQYQR-QG--LFLVLRDFQGLTQIIIPQDEAHSHVRKL 79

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           + +   E V+ + G+V SR     N  + TG IE+  +  E+L+  ++LP  +    +  
Sbjct: 80  LCNAPVESVVRVTGIVSSRPPGQENLKMPTGDIEVKVESAEVLNFCKKLPFEIKDFIKKS 139

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   L  N+  R++++  MR  +   + F++  TP L   +P GA++F
Sbjct: 140 EALRMQYRYLDLRSSQLQYNLRLRSQVVMRMREYLCNHHGFVDVETPTLFKRTPGGAKEF 199

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 200 LVPSR-EPGKFYSLPQSPQQFKQLLMIGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 257

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I   +E +L+  + E      ++  F  + Y++A+  YGTDKPD R  + + 
Sbjct: 258 MSFVDQAGIQRLIEGLLQYSWPE--ERGPITTPFPSMTYEEALADYGTDKPDTRFGMKIV 315

Query: 301 NVTEHFVHSEFRVFSKILSVNPGY-EVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++     +      +LS      +   IP           + + E A+SQ    +  +
Sbjct: 316 DISDTLRRVDIGFVQNVLSYPHSTAKAICIPQGVRYLKNKDLESLKEAAKSQFNQEIMDV 375

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R D     +    + K L+      +   L+MQ  D     AGD  + CS     R  
Sbjct: 376 ICRPDG----SLKSLLTKFLSEEQQSELIQALNMQVDDVVLLAAGDHERVCSALGSLRLE 431

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473
            A  L      + +     F W++DFP +   +E   +++ AH+PFT P     +L  +D
Sbjct: 432 SADLLEAAGMVLRDPAALHFLWVVDFPLFLPKKENPSELESAHHPFTAPHPLDTNLLYSD 491

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +++  YDLV NG EI  G IR H +E        V      V      L  A + G 
Sbjct: 492 PTKVRSQHYDLVLNGSEIGGGSIRIHNAEQQRFVLEKVLKEDSEV---LSHLLEALEFGA 548

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           PPHGGIA G+DR++ L++G+ ++R+V  FP S    DL+  +P  V+ E+L    + +
Sbjct: 549 PPHGGIALGLDRLISLIVGSPSIRDVIAFPKSFRGRDLMGNAPDYVTPEELEPYHIHV 606


>gi|26452525|dbj|BAC43347.1| putative aspartate--tRNA ligase [Arabidopsis thaliana]
          Length = 528

 Score =  501 bits (1291), Expect = e-139,   Method: Composition-based stats.
 Identities = 200/537 (37%), Positives = 302/537 (56%), Gaps = 18/537 (3%)

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-----VFGERE 119
           +R E+V+ ++G V SR  E++N  + TG +E+ A+ +EIL+                +  
Sbjct: 1   MRLEYVVLVEGTVRSRPNESVNKKMKTGFVEVVAEHVEILNPVRTKLPFLVTTADENKDL 60

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178
             E IR ++R LDLRR  +  NIV R  ++  +R  +   + FIE  TPIL+ S+PEGAR
Sbjct: 61  IKEEIRLRFRCLDLRRQRMKNNIVLRHNVVKLIRRYLEDRHGFIEIETPILSRSTPEGAR 120

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSR+  G+FYALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF QLD
Sbjct: 121 DYLVPSRIQSGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EFTQLD 179

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEM+F+  +D+L   E+++R VF E      + + F R+ Y DA+ RYG+D+PD R  + 
Sbjct: 180 MEMAFMPMEDMLKLNEDLIRKVFSEIKGIQ-LPDPFPRLTYADAMDRYGSDRPDTRFDLE 238

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR---AFCDRMNEWARSQGQPG 355
           + +V+  F  S FRVF++ L      +V  +P      +       D  NE  +S G  G
Sbjct: 239 LKDVSNVFTESSFRVFTEALESGGIIKVLCVPLGAKKYSNSALKKGDIYNEAMKS-GAKG 297

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L ++  ++ ++G + G+  +   L+         +     GD   F  G           
Sbjct: 298 LPFL--KVLDNGEIEGIAALVSSLDSAGKINFVKQCGAAPGDLILFGVGPVTSVNKTLDR 355

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  +A ++ +I+ +     W+ DFP +EWNE E++++  H+PFT P+         DL 
Sbjct: 356 LRLFVAHDMDLIDHSKHSILWVTDFPMFEWNEPEQRLEALHHPFTAPKPEDMD----DLP 411

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           S +A  YD+V NG EI  G +R +  +V  +    +GIS E  E++FG L  A   G PP
Sbjct: 412 SARALAYDMVYNGVEIGGGSLRIYKRDVQEKVLEIIGISPEEAESKFGYLLEALDMGAPP 471

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           HGGIA G+DR+VM+L GA ++R+V  FP +      L  +PS V  +QL++L +R  
Sbjct: 472 HGGIAYGLDRMVMMLGGASSIRDVIAFPKTTTAQCALTRTPSEVDPKQLQDLSIRTK 528


>gi|47094595|ref|ZP_00232243.1| aspartyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|47017030|gb|EAL07915.1| aspartyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
          Length = 467

 Score =  501 bits (1291), Expect = e-139,   Method: Composition-based stats.
 Identities = 179/472 (37%), Positives = 261/472 (55%), Gaps = 7/472 (1%)

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGARD+LVP
Sbjct: 1   MRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVP 60

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D+E SF
Sbjct: 61  SRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQIDLETSF 119

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +++I    E++L  V +E  N       F R+ Y +A+ R+G+DKPD+R  + + NV+
Sbjct: 120 LTKEEIQAITEDMLVDVVKEAKNITI-DKPFPRMTYKEAMDRFGSDKPDIRFGLELQNVS 178

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF   +      +     A     +R   D +  +  + G  GLA++    
Sbjct: 179 DVVKDVDFKVFQSAIENGGEVKAINAKAAAANFSRKDLDALGVFVANYGAKGLAWLKV-- 236

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E+G +   GP+AK         ++  L  +DGD   F A       +     RN + +E
Sbjct: 237 -EAGELK--GPIAKFFPEEKATELKASLQAEDGDLLLFAADKADIVAASLGALRNKLGKE 293

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L +IN     F W+ D+P +E++EE  +   AH+PFT+P+     L   D   + A  YD
Sbjct: 294 LNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAEAYD 353

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA G+
Sbjct: 354 IVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIALGL 413

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 414 DRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKKE 465


>gi|33519906|ref|NP_878738.1| aspartyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|46577209|sp|Q7VQX8|SYD_BLOFL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33504251|emb|CAD83514.1| aspartyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 576

 Score =  501 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 198/581 (34%), Positives = 313/581 (53%), Gaps = 14/581 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT  CG L +S VG  V L GWV++ R  G +IF+D+RD  G  QV  N D     +  A
Sbjct: 2   RTAYCGQLNLSHVGLEVTLCGWVNKYRNFGKLIFVDLRDREGCIQVYFNSDAQKKTYVRA 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             ++ E+ + + G+V SR    IN N+ TG IE+ A+   +L+V+    LP+   ++  E
Sbjct: 62  ADLKQEFCIQLTGIVRSRPVSQINKNMSTGFIEIEAKFFLVLNVSNP--LPLDIHQDNIE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR  +  NI  R+R++      M  E  +   TP+L  S+PEGARD+LV
Sbjct: 120 ENRLKYRYLDLRRPIMFHNIQTRSRVMALTHRFMELEGLLNIDTPVLAKSTPEGARDYLV 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR++   +YALPQ+PQ +KQLLM +G DRY+QI  CFRDED RSDR P EF Q+D+E+S
Sbjct: 180 PSRLHINKYYALPQSPQMFKQLLMIAGIDRYYQITKCFRDEDLRSDRQP-EFTQIDVEIS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+    I   ME  +  +++E  N       F +  Y + I R+G+D PDLRNPI M +V
Sbjct: 239 FITAKKIRELMEFFICKLWKEILNVE--LEVFSQFSYAEVISRFGSDSPDLRNPIEMKDV 296

Query: 303 TEHFVHSEFRVF---SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           +  F     ++F   +  +       +      G    R   D+ +++A+  G     ++
Sbjct: 297 SSIFQSLGNKLFICNAGCVDTIDTQVIVMNVPSGFKLTRNEIDKYSDYAKKSGIQQFLWM 356

Query: 360 FWRLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA--GDPLKFCSFAADA 416
             ++++   +  + GP+   LN    + +  ++ +++ D  FF       L      +  
Sbjct: 357 KIQMNDCKEITAIDGPIINLLNKNFLQLLMAQVKIENNDILFFGFNNDKNLSTTRMLSAL 416

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           R+ +  +L ++  + ++  WI+DFP ++ N    K+   H+ FT P+         +   
Sbjct: 417 RSKLGYDLNLVKQDSWKPLWIVDFPMFKKNT-SGKLVSMHHMFTAPKDNDLICLKRNPEL 475

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  YD+V NG E+ SG +R H  ++    F  +GI++E  + +FG L  A + G PPH
Sbjct: 476 AVSEAYDIVINGCEVGSGSVRIHSYKLQQAMFDILGITRENQQKKFGCLMNALKYGAPPH 535

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
            GIA G+DR+VMLL  + N+R+V  FP +    DL++ +P 
Sbjct: 536 AGIALGLDRLVMLLTKSNNIRDVIAFPKTTGAMDLMIDAPD 576


>gi|327270229|ref|XP_003219892.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Anolis
           carolinensis]
          Length = 635

 Score =  501 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 198/607 (32%), Positives = 305/607 (50%), Gaps = 25/607 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT +CG+L    +G  V L GW+   R  G   F+ +RD  G+TQ+V   D+A   + K+
Sbjct: 43  RTKTCGELRSVHIGQEVTLCGWIQYQR-QGQ--FVILRDFQGLTQIVIPQDAAASHVKKT 99

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +     E V+ + G V+SR     N N+ TG IE+  +  E+L+  ++LP  +    +  
Sbjct: 100 LCDVPVESVVKVTGTVVSRPPGQTNPNMPTGDIEVKVETAEVLNSCKKLPFEMKDFTKKN 159

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDF 180
           E++R +YR+LD+R   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 160 EALRMQYRYLDMRSAQMQYNLRLRSQMVMKMREYLCNYYGFVDVETPTLFKKTPGGAKEF 219

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  + DR P EF Q+D+E
Sbjct: 220 VVPSR-EAGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSKPDRQP-EFTQVDIE 277

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I   +E +L+  +        ++  F  I Y++A+  YGTDKPD R  + + 
Sbjct: 278 MSFVDQPGIQALIEGLLQYSW--PLEKGPINTPFPSISYNEALSVYGTDKPDTRFAMKIT 335

Query: 301 NVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           +V++   + +       LS          IP      +     R+NE  + Q    L  +
Sbjct: 336 DVSDVLRNVQMEFLENHLSEPHGTIRAICIPQGAKYLHDKDLSRLNEMTKFQFNQVLLPL 395

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             R D    V     +AK LN      +   +     D     AG+  K C      R  
Sbjct: 396 ILRPD----VRLKSRLAKFLNESKKLELLKAVQANVDDVVVLAAGEQEKVCLTLGKVRLE 451

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473
            A+ L      +   + F F W++DFP +   EE   +++ AH+PFT P    E L   +
Sbjct: 452 AAELLEARGLPLRKPSAFHFLWVVDFPLFLQKEESPSELESAHHPFTAPHPSDEHLLYTE 511

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              ++   YDLV NG EI  G IR H ++       NV             L  A   G 
Sbjct: 512 PSKVRGQHYDLVLNGSEIGGGSIRIHNAKQQCFVLENVLKEDTKP---LAHLLEALDSGA 568

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR++ L++GA+++R+V  FP S    DL+  +P  VS E+L+   +++  
Sbjct: 569 PPHGGIALGLDRLICLIVGAESIRDVIAFPKSFKGRDLMSNAPDDVSPEELKPYHIQVSW 628

Query: 594 NPKKILK 600
              +  K
Sbjct: 629 PSAETQK 635


>gi|66826455|ref|XP_646582.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74997394|sp|Q55C99|SYDM_DICDI RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; Flags:
           Precursor
 gi|60474489|gb|EAL72426.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 692

 Score =  500 bits (1287), Expect = e-139,   Method: Composition-based stats.
 Identities = 199/627 (31%), Positives = 309/627 (49%), Gaps = 55/627 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC------ 58
           R+HSCG++   D+G  V + GW++ +R  G  +FL IRD +G  Q   +    C      
Sbjct: 76  RSHSCGEITSKDIGKEVIIYGWINSLRNLGDNVFLVIRDGHGKVQCYVDLKQQCILKSSV 135

Query: 59  -----------FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
                       E  K  + E ++ I G V++R    +N N+ TG+IE+S  ++++L+  
Sbjct: 136 PNIDINERNSIEENIKLFKLESIVSIKGKVIARPERMVNKNMSTGEIEISVDQLQLLNNC 195

Query: 108 -EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
            +             E +R KYR++DLRRD +  NI  R+++  + R  +I + FIE  T
Sbjct: 196 VDLPFTVEHDSTAVSEELRLKYRYVDLRRDKVQSNIRLRSKVAMAARNYLINQQFIEVET 255

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P L   +PEGAR++LVP+R +QG FY+LPQ+PQQYKQLLM  G DRYFQ+A C+RDED R
Sbjct: 256 PTLFRPTPEGAREYLVPTR-HQGQFYSLPQSPQQYKQLLMVGGIDRYFQLARCYRDEDLR 314

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           SDR P EF Q+DME+SFV    I   +E +++ +++E   G  +   F    Y+  +  Y
Sbjct: 315 SDRQP-EFTQIDMELSFVNTQMIYRIIEGLVKTLWKE--AGFNIDYEFPFYTYEQVLSTY 371

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSEFRV--FSKILSV--------NPGYEVWAIPAKGGGG 336
           G DKPD R  + + ++T+ F   E  +  F   LS          P  +   +       
Sbjct: 372 GIDKPDTRYDMKLVDITDCFNKDETNINLFKNALSQASNNFKESKPVIKCIKLDQVLPTL 431

Query: 337 NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
                D++   + S            +    N      ++K ++      I  R+++++G
Sbjct: 432 KSKHLDQITTESNS---------IITVQIKSNNEWKSLISKSISEQEKTLITERMNLKEG 482

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGII-----NCNCFEFCWIMDFPFYEWNE---E 448
           D      G   +  S     R + A  L  +     +   F F W++DFP +  ++   E
Sbjct: 483 DVLLISVGPRFQVESTLGKTRIYCANLLKELNLLKLDPQQFNFLWVVDFPLFTPSDYMNE 542

Query: 449 EKKIDFAHNPFTMPQGGMESLK------GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +  +   H+PFT P      L        +D   I+   YD+V NG E+  G IR H S+
Sbjct: 543 QSALLSTHHPFTAPHPEDIDLLLNPLSTPSDYSKIRGQHYDIVINGVELGGGSIRIHNSD 602

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           V L+    V   +  +  RF  L  A   G PPHGGIA G DR+  LL+ + ++R+V  F
Sbjct: 603 VQLRVLEKVLKLEPHMVQRFNHLLTALSMGCPPHGGIALGFDRLCSLLVNSNSIRDVIAF 662

Query: 563 PMSQNFCDLLMGSPSTVSVEQLRELGL 589
           P +    +L+  SP+TV+  +L EL L
Sbjct: 663 PKTSGGKELMTSSPATVTKSELDELFL 689


>gi|313906015|ref|ZP_07839368.1| tRNA synthetase class II (D K and N) [Eubacterium cellulosolvens 6]
 gi|313469128|gb|EFR64477.1| tRNA synthetase class II (D K and N) [Eubacterium cellulosolvens 6]
          Length = 594

 Score =  500 bits (1287), Expect = e-139,   Method: Composition-based stats.
 Identities = 251/599 (41%), Positives = 355/599 (59%), Gaps = 24/599 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH+CG+L + D G  V L GW   +R     + F+ +RD YG TQ+V   +    E   
Sbjct: 4   RTHTCGELRIGDAGKTVTLVGWFENIRKVSKNLGFVVLRDFYGTTQLVIETEEMM-EQFN 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF--GEREYP 121
           ++  E  + I G V  RS++  N+N+ TG IE+   ++ +L       LP      +E  
Sbjct: 63  AINEESTISITGEVRERSSK--NSNMETGDIEVVPTEMTVLGKNIHNELPFQINHSKEAD 120

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E+ R KYR+LDLR   +   IV R++I   +R  MI   F+E +TPILT SSPEGARD+L
Sbjct: 121 ENTRLKYRYLDLRNPEVKNKIVLRSQITAELRKSMIEHGFLEITTPILTCSSPEGARDYL 180

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSR   G FYALPQAPQQ+KQLLM SGFDRYFQIAPCFRDED R+DR PGEFYQLDMEM
Sbjct: 181 VPSRNFPGKFYALPQAPQQFKQLLMTSGFDRYFQIAPCFRDEDARADRSPGEFYQLDMEM 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN-NFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +F +Q+D+   +E+VL  VFE++    T     F+RI Y +A+  YGTDKPDLR  + + 
Sbjct: 241 AFADQEDVFEVLEDVLPPVFEKYGVYKTAKKPPFMRIPYLEALDTYGTDKPDLRISLKLQ 300

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           + TE      F  F           V A+ A      R   D++ E        G    +
Sbjct: 301 DATEVLADCGFEPFKG-------QTVKAVVAHDFTATRKAIDKVCEEVEML--SGAKAYW 351

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           +++ E+  ++  G +AK +   N E +  +L ++ GD     AG               +
Sbjct: 352 FKVGENNEIS--GGIAKFVKD-NAETVIEKLGLKAGDFVGVTAGTLRAAQKTGGALIKVL 408

Query: 421 AQELGI-INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----NDLL 475
                  +    ++FCWI+DFP YE  EE  K++F HNPF+MPQGGM+ LK     +  L
Sbjct: 409 GATFEQYMEKEQYQFCWIVDFPMYEIGEESGKLEFCHNPFSMPQGGMQGLKDAVANHTEL 468

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + A+QYDLVCNG E++SG +RNH  E+M++AFS VG+ ++ V+ +F  +Y AF  G PP
Sbjct: 469 DVLAYQYDLVCNGVELSSGAVRNHDPELMVEAFSVVGLGEDDVKAKFPAMYNAFTYGAPP 528

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           H GIA G+DR++ML+ G +++RE+  FPM++N  D++MG+PSTV  +QL ++ +RI+E 
Sbjct: 529 HAGIAPGVDRMIMLIAGEESIREIIPFPMNKNAMDIMMGAPSTVEEKQLTDVHIRIIEE 587


>gi|209528217|ref|ZP_03276684.1| aspartyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209491339|gb|EDZ91727.1| aspartyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 518

 Score =  498 bits (1283), Expect = e-138,   Method: Composition-based stats.
 Identities = 206/518 (39%), Positives = 299/518 (57%), Gaps = 17/518 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT+ CG L   ++G  V L GWV R R HGG++FLD+RD  G+ Q++++P+     + ++
Sbjct: 2   RTYYCGHLRSVNIGETVTLCGWVDRYRDHGGVVFLDLRDRSGLVQIISDPERTPNSYSLS 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFGERE 119
            SVR+E+VL I G V  R  E+IN  I  G IE+ A +IEIL+         +       
Sbjct: 62  TSVRNEYVLRITGRVSQRPEESINPKIPGGDIEVYADEIEILNGLGKPLPFLVSSNDTES 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGAR 178
             E +R KYR+LDLRR+ + +N+  R  +I +MR  +   E+FIE  TPILT S+PEGAR
Sbjct: 122 VREELRLKYRYLDLRRERMTRNLQLRHEVIKAMRRFLEDQEHFIEVETPILTRSTPEGAR 181

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRVN G ++ALPQ+PQ +KQ+LM SGFDRY+QIA CFRDED R+DR P EF QLD
Sbjct: 182 DYLVPSRVNPGEWFALPQSPQLFKQMLMVSGFDRYYQIARCFRDEDLRADRQP-EFTQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MEMSF+ Q+++L   EN++  +F+   N + +   F R+ Y +A+ RYG+DKPD R  + 
Sbjct: 241 MEMSFMSQEEVLALNENLVCHIFKTVKNID-LPRPFPRMTYSEAMERYGSDKPDTRFGLE 299

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           + +V++    S F+VFS  +      ++  IP      +         + + A   G  G
Sbjct: 300 LADVSDLLKDSGFKVFSAAIKSGGIVKILPIPGGNDLISNVQIKPGGDLFKEATEAGAKG 359

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LAYI  R+   G +  +G +  +L+      I  R + + GD   F AGD          
Sbjct: 360 LAYI--RVKADGQIDTIGAIKDNLSDDQKAEILQRTNAKAGDLLLFGAGDVATVNKTLDR 417

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  I   LG+I+ N     W+ DFP +EWN++EK+++  H+PFT P         NDL 
Sbjct: 418 LRLVIGNRLGLIDPNQINLLWVTDFPMFEWNQDEKRLEAIHHPFTSPHPDDI----NDLK 473

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
           + +A  YDLV NG EI  G +R +  E+  + F  +G+
Sbjct: 474 TARAQAYDLVLNGTEIGGGSLRIYQREIQEKVFDAIGL 511


>gi|302756879|ref|XP_002961863.1| hypothetical protein SELMODRAFT_140340 [Selaginella moellendorffii]
 gi|300170522|gb|EFJ37123.1| hypothetical protein SELMODRAFT_140340 [Selaginella moellendorffii]
          Length = 555

 Score =  498 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 201/541 (37%), Positives = 296/541 (54%), Gaps = 18/541 (3%)

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-----PLPV 114
           ++   +R E+V+ ++G V SR     N N+ TG +E+ A K+E+L+              
Sbjct: 17  KLHARLRIEYVVAVEGTVRSRPQGAANTNLKTGSVEIIADKVEVLNPVTLNLPFLVTPLD 76

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASS 173
             +    E +R +YR LDLRR  L+ N+  R RI+  MR  +     F+E  TPIL+ S+
Sbjct: 77  QSKNVISEEVRLRYRHLDLRRPQLNANLRLRHRIVKLMRRYLEDVHGFVEVETPILSRST 136

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           PEGARD+LVPSRV   +FYALPQ+PQ +KQ+LM SGFDRYFQ A CFRDED R+DR P E
Sbjct: 137 PEGARDYLVPSRVQPATFYALPQSPQLFKQMLMVSGFDRYFQFARCFRDEDLRADRQP-E 195

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F QLDME++F   +D+L   E+++R VF E      + + F R+ Y +A+ +YG+DKPD 
Sbjct: 196 FTQLDMELAFTPLEDMLELNEDLIRLVFREIKGVE-LPDPFPRLTYAEAMSKYGSDKPDT 254

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQ 351
           R  + +  +++ F  S F  F+  +S     +   +   G      R     + + A   
Sbjct: 255 RFGMQLVELSDVFEKSSFAPFATAISEGGVVKAITVCGGGKSITATRLKKGDIYQEAVRC 314

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLN-IVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
           G  GL ++  ++ E G V G   +   L+     +    + D + GD   F  G      
Sbjct: 315 GAKGLPFL--KVAEGGEVEGSTALKSSLSCPETRDNFLAKCDAKPGDVIIFANGPTSLVN 372

Query: 411 SFAADARNHIAQ-ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
           +     R  IA+    +I+ +  +  WI DFP +EWN+ EK+++  H+PFT P+      
Sbjct: 373 ATLGRLRTLIAETSENLIDKSRNDILWITDFPMFEWNDAEKRLEALHHPFTAPRPEDM-- 430

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              DL S +A  YD+V NG EI  G +R H  +V  +     G+S +  E++FG L  A 
Sbjct: 431 --KDLSSARALAYDMVYNGVEIGGGSLRIHRRDVQQKVLEASGLSAQEAEDKFGYLLEAL 488

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGGIA G+DR+VMLL G K++R+V  FP +      L  +PSTV   QL+EL L
Sbjct: 489 ELGAPPHGGIAYGVDRLVMLLAGEKSIRDVIAFPKTTAAHCSLTRTPSTVDPRQLQELRL 548

Query: 590 R 590
           +
Sbjct: 549 Q 549


>gi|281210595|gb|EFA84761.1| aspartyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 707

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 207/630 (32%), Positives = 326/630 (51%), Gaps = 48/630 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---------- 52
           + RTH+CG+L  +DVG  V L+GWV  +R  G  IF+ IRD +G TQ+            
Sbjct: 87  KTRTHTCGELSKNDVGKTVILNGWVSSLRKLGEFIFIVIRDGHGTTQIYCPLENKSLQLC 146

Query: 53  ----NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
               N D    +  KS+R E V+ + G+V  R  +  N  + TG IE+   ++ +L+   
Sbjct: 147 SEVPNVDFNSVDHLKSLRLESVVRVVGVVRERPPKMANPAMSTGDIEVDVSQLVLLNQCR 206

Query: 109 ELPLPVFGERE-YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
           +LP  +  + E   E +R K+R++DLRR ++  NI  R+++  + R  +  + F+E  TP
Sbjct: 207 DLPFTIEHDAERVTEEVRLKHRYVDLRRPSVQSNIRLRSKVSMAARHYLTGQQFVEVETP 266

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            L   +PEGAR++LVP+R ++G FY+LPQ+PQQYKQLLM  G DRYFQ+A C+RDED R+
Sbjct: 267 TLFRPTPEGAREYLVPTR-HKGQFYSLPQSPQQYKQLLMVGGLDRYFQLARCYRDEDLRA 325

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
           DR P EF Q+DME+SFV+   + N +E ++  +++E   G  +   F    Y   + RYG
Sbjct: 326 DRQP-EFTQIDMELSFVDCKQVYNIIEGLIVAMWKE--AGYDIKTPFPHYTYRQVLDRYG 382

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG---------YEVWAIPAKGGGGNR 338
            DKPD R  + ++++T  F  ++  +F K+L   P           +   +P      + 
Sbjct: 383 IDKPDTRYGLELNDITNIFSDTKVEIFRKLLDQPPSSSFTEAEHIIKCIKLPKVQPTMSS 442

Query: 339 AFCDRMNEWARSQ--GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
              D +   +++     PGL  I       G+      + K L+ V  + +  RL +++G
Sbjct: 443 KDIDTILNESKTLIPNSPGLVSIRV-----GSKEWKSMIMKSLSQVEKDKLSERLALEEG 497

Query: 397 DSCFFIAGDPLKFCSFAADARNH---IAQELGII--NCNCFEFCWIMDFPFYEWNE---E 448
           D     AG      S     R     + +E G++  N   F F W+ DFP +   +   +
Sbjct: 498 DVVLVAAGPRFIVESLLGKVRIFSANLMKERGLLELNPKQFNFLWVDDFPLFTPADYLSD 557

Query: 449 EKKIDFAHNPFTMPQGGME-----SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
              +   H+PFT P            K +D   I+   YD+V NG E+  G IR H  E 
Sbjct: 558 ASPLQSTHHPFTAPHPDDMLALLNGEKPSDFEHIRGLHYDIVLNGVELGGGSIRIHNQET 617

Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            L+    V   +  +  RF  L  A   G PPHGGIA G DR++ L++G+ ++R+V  FP
Sbjct: 618 QLRVLERVLKLEPHMVQRFNHLLTALSMGCPPHGGIALGFDRLMSLMVGSPSIRDVIAFP 677

Query: 564 MSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            +    +L+  SP++V+ ++L EL L+ +E
Sbjct: 678 KTSGGRELMTNSPASVTTQELIELNLKQIE 707


>gi|302798054|ref|XP_002980787.1| hypothetical protein SELMODRAFT_154078 [Selaginella moellendorffii]
 gi|300151326|gb|EFJ17972.1| hypothetical protein SELMODRAFT_154078 [Selaginella moellendorffii]
          Length = 555

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 201/541 (37%), Positives = 296/541 (54%), Gaps = 18/541 (3%)

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-----PLPV 114
           ++   +R E+V+ ++G V SR     N N+ TG +E+ A K+E+L+              
Sbjct: 17  KLHARLRIEYVVAVEGTVRSRPQGAANTNLKTGSVEIIADKVEVLNPVSLNLPFLVTPLD 76

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASS 173
             +    E +R +YR LDLRR  L+ N+  R RI+  MR  +     F+E  TPIL+ S+
Sbjct: 77  QSKNVISEEVRLRYRHLDLRRPQLNANLRLRHRIVKLMRRYLEDVHGFVEVETPILSRST 136

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           PEGARD+LVPSRV   +FYALPQ+PQ +KQ+LM SGFDRYFQ A CFRDED R+DR P E
Sbjct: 137 PEGARDYLVPSRVQPATFYALPQSPQLFKQMLMVSGFDRYFQFARCFRDEDLRADRQP-E 195

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F QLDME++F   +D+L   E+++R VF E      + + F R+ Y +A+ +YG+DKPD 
Sbjct: 196 FTQLDMELAFTPLEDMLELNEDLIRLVFREIKGVE-LPDPFPRLTYAEAMSKYGSDKPDT 254

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQ 351
           R  + +  +++ F  S F  F+  +S     +   +   G      R     + + A   
Sbjct: 255 RFGMQLVELSDVFEKSSFAPFATAISEGGVVKAITVCGGGKSITATRLKKGDIYQEAVRC 314

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLN-IVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
           G  GL ++  ++ E G V G   +   L+     +    + D + GD   F  G      
Sbjct: 315 GAKGLPFL--KVAEGGEVEGSTALKSSLSCPETRDNFLAKCDAKPGDVIIFANGPTSLVN 372

Query: 411 SFAADARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
           +     R  IA+    +I+ +  +  WI DFP +EWN+ EK+++  H+PFT P+      
Sbjct: 373 ATLGRLRTLIAETSDNLIDKSRNDILWITDFPMFEWNDTEKRLEALHHPFTAPRPEDM-- 430

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              DL S +A  YD+V NG EI  G +R H  +V  +     G+S +  E++FG L  A 
Sbjct: 431 --KDLSSARALAYDMVYNGVEIGGGSLRIHRRDVQQKVLEASGLSAQEAEDKFGYLLEAL 488

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGGIA G+DR+VMLL G K++R+V  FP +      L  +PSTV   QL+EL L
Sbjct: 489 ELGAPPHGGIAYGVDRLVMLLAGEKSIRDVIAFPKTTAAHCSLTRTPSTVDPRQLQELRL 548

Query: 590 R 590
           +
Sbjct: 549 Q 549


>gi|241845294|ref|XP_002415522.1| aspartyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215509734|gb|EEC19187.1| aspartyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 632

 Score =  494 bits (1273), Expect = e-137,   Method: Composition-based stats.
 Identities = 203/605 (33%), Positives = 308/605 (50%), Gaps = 28/605 (4%)

Query: 1   MHRY--RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           ++RY  RTH+CG+L     G  V L GW+   R      FL +RD YGITQVV   D   
Sbjct: 44  LNRYTWRTHTCGELRPVHRGKQVTLCGWILFKRMDK---FLIVRDAYGITQVVIPDDEKA 100

Query: 59  FE-IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFG 116
              + +S+  E V+ I G V+ R     N N+ TG+IE+  ++++ L+ A+ +LP  V  
Sbjct: 101 ASTLLESLPLESVVQITGEVVERPQGQWNENLPTGKIEVLCKELKALNNAKVDLPFHVRE 160

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPE 175
            ++  E++R +YR+LDLR   + +N+  R+ +   MR  ++    F+E  TP L   +P 
Sbjct: 161 YQKKKEALRMRYRYLDLRSSEMQRNLRFRSDLQMRMRNFLVQSCGFVEIETPTLFKRTPG 220

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GA++++VP+R   G FY+L Q+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF 
Sbjct: 221 GAQEYVVPTRF-PGQFYSLVQSPQQFKQLLMVGGIDRYFQMARCYRDEGARPDRQP-EFT 278

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           Q+D+EMSF   +DI+   E +L   + E  +   ++  F  + Y DAIR+YGTDKPDLR 
Sbjct: 279 QVDIEMSFATANDIMEVTEELLVKSWPE--DMTPITEPFPIMTYRDAIRQYGTDKPDLRF 336

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQGQ- 353
            + + +VT+     E  + SK  S         +   G     R   +   + A+     
Sbjct: 337 GMQLVDVTQVMKDCELNIISKATSAEGSSVQTIVVPGGARVWKRVHAEAFKDIAKHHFNL 396

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            G+  I    D          + KHL    T  +  RLD + GD     AG+  K C   
Sbjct: 397 QGIVDIQVCED----STVKSSIKKHLTPELTGKLLQRLDAKPGDLILMCAGNTEKVCLLL 452

Query: 414 ADARNHIAQEL-----GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
              R    + L      +     F+F W++DFP ++  EE+  +   H+PFT P      
Sbjct: 453 GKLRLEALKILSEAGIHLFEPGTFKFLWVVDFPLFKL-EEDGGLKANHHPFTAPHLDDLH 511

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           L   D L  +   YDLV NG+E+A G +R H + +  Q      I K   + +   L  A
Sbjct: 512 LIHTDPLKARGQHYDLVLNGWEVAGGSVRIHNAHLQRQVLRE--ILKARDDTQLSHLLEA 569

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
            + G PPHGGIA G  ++V +L  + ++R+V  FP S    DL+   P+ ++  ++    
Sbjct: 570 LESGAPPHGGIALG--KLVCILCNSPSIRDVIAFPKSVEGKDLMCNVPARITQAEMDLYH 627

Query: 589 LRIVE 593
           +R V+
Sbjct: 628 IRTVD 632


>gi|328871079|gb|EGG19450.1| aspartyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 740

 Score =  494 bits (1273), Expect = e-137,   Method: Composition-based stats.
 Identities = 210/637 (32%), Positives = 319/637 (50%), Gaps = 54/637 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSA------ 57
           RTH CG+L + DVGS V L GWV  +R  G  +IF+ +RD +G TQ+  + +S       
Sbjct: 112 RTHDCGELRIKDVGSEVVLYGWVQSLRMIGDNLIFIVLRDGHGTTQLCISSESKQLSLKS 171

Query: 58  -----CFEIAKSVRSE----WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
                     K +++      V+ I G V++R     N  + TG IE+S  ++ +L+   
Sbjct: 172 TVLEVSLNEIKDIKTNISLESVVSIKGRVIARPQGMTNEKMSTGAIEVSVDELCLLNQCR 231

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
           +LP  +  +    E +R ++R++DLRR  +  NI  R+R+  + R  +  + F E  TP 
Sbjct: 232 DLPFTIEHDTGVTEEMRLRHRYVDLRRPDVQHNIRLRSRVAMAARDFLTRQKFTEVETPT 291

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L   +PEGAR++LVP+R+  G FY+LPQ+PQQYKQLLM  G DRYFQ+A C+RDED R+D
Sbjct: 292 LFRPTPEGAREYLVPTRMA-GQFYSLPQSPQQYKQLLMVGGMDRYFQLARCYRDEDLRAD 350

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           R P EF Q+DMEMSFV  D +   +E ++  ++ E   G T+   F  + Y DA+ R+G 
Sbjct: 351 RQP-EFTQIDMEMSFVNVDMVYRIIEGLIVSMWRE--AGYTIQAPFPFLSYKDALSRFGV 407

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG---------YEVWAIPAKGGGGNRA 339
           DKPD R  + M +++  F ++   +  KIL   P           +   +P         
Sbjct: 408 DKPDTRYGLEMRDLSSVFANTSIPLLKKILDATPPSTFEEAKSVIKCIKLPQVLNHFTSK 467

Query: 340 FCDRMNEWARSQ--GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ--- 394
             D++   +++   G PGL  I  + D          ++KH++    + I  R  M+   
Sbjct: 468 EIDQLVLDSKTFAPGSPGLIAIKCQSDR----EWKSMLSKHMSSQEVDQIINRFAMEYKE 523

Query: 395 ---DGDSCFFIAGDPLKFCSFAADARNHIA-----QELGIINCNCFEFCWIMDFPFYEWN 446
               GD     AG            R   A     ++L  IN   F F W++DFP +   
Sbjct: 524 PVQAGDLILLSAGPRCIVEPVLGKTRILCANMMRDKKLLEINPRQFNFLWVVDFPLFTPA 583

Query: 447 E---EEKKIDFAHNPFTMPQGGMESLKGN-----DLLSIKAFQYDLVCNGFEIASGGIRN 498
           +   E   +   H+PFT P         N     D   I+   YD+V NG E+  G IR 
Sbjct: 584 DYLNENSPLQATHHPFTAPHPDDIHHLANGTKPSDFSHIRGLHYDIVLNGVELGGGSIRI 643

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
           H S + L+    V   +  +  RF  L  A   G PPHGGIA G DR++ L++G+ ++R+
Sbjct: 644 HNSALQLKVLEGVLKLEPHLVQRFSHLLNALSLGCPPHGGIALGFDRLMALMVGSPSIRD 703

Query: 559 VSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           V  FP +    +L+  SPS V+  +L ELGL+++   
Sbjct: 704 VIAFPKTSGGRELMTNSPSQVTSAELTELGLKLLNKE 740


>gi|242056369|ref|XP_002457330.1| hypothetical protein SORBIDRAFT_03g005710 [Sorghum bicolor]
 gi|241929305|gb|EES02450.1| hypothetical protein SORBIDRAFT_03g005710 [Sorghum bicolor]
          Length = 507

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 187/507 (36%), Positives = 288/507 (56%), Gaps = 16/507 (3%)

Query: 89  IITGQIELSAQKIEILS---VAEELPLPVFG--EREYPESIRFKYRFLDLRRDTLHKNIV 143
           +  G +++ A  + +L+    +   P+ +    + ++PE IR ++R LDLRR  +  N+ 
Sbjct: 2   LHVGTLKVVADHVLVLNSVTRSLPFPVTIADTVKEKFPEEIRLRFRVLDLRRPQMQSNLR 61

Query: 144 KRTRIINSMRCRM-IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202
            R  ++  +R  +     F+E  TP+L+ S+PEGARD+LVPSRV  G+FYALPQ+PQ +K
Sbjct: 62  LRHNVVKLIRRYLEDEHEFVEIETPVLSKSTPEGARDYLVPSRVQPGTFYALPQSPQLFK 121

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           Q+LM SGF++Y+QIA CFRDED R+DR P EF QLDME++F   +D+L   E+++R VF+
Sbjct: 122 QMLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQLDMEIAFTSMEDMLKLNEDLMRHVFQ 180

Query: 263 EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNP 322
                  + N F R+ Y +A+ RYGTD+PDLR    + +V++ F+ S F+VF+  L    
Sbjct: 181 -VVGDIKLPNPFPRLTYAEAMDRYGTDRPDLRFDWELKDVSDVFLGSNFKVFADTLENGG 239

Query: 323 GYEVWAIPAKGGGGNRAFCDRMNEW--ARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
             +   +P      +     +   +  A   G  GL ++  ++ ++G + G+GP+   L 
Sbjct: 240 VIKALCVPGGAAVFSNTDLKKGTVYTEASKAGAKGLPFL--KVMDTGELEGIGPLVSSLK 297

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
               E +   LD + GD   F  G+           R  IA +L +I+ +     W+ DF
Sbjct: 298 PEKKEQLVELLDAKAGDLILFALGEQSSANRILGRLRLFIAHKLEVIDTSAHSVLWVTDF 357

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +EWN +E++ +  H+PFT P         NDL S +A  YD++ NG EI  G +R + 
Sbjct: 358 PMFEWNSDEQRYEALHHPFTAPNPEDM----NDLPSARALAYDMIYNGVEIGGGSLRIYK 413

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           S+V  + F  +GIS E  E +FG L   F  G PPHGGIA G+DR+VMLL G  ++R+V 
Sbjct: 414 SDVQQRIFEIIGISPEQAEEKFGYLLECFDMGAPPHGGIAYGLDRLVMLLAGESSIRDVI 473

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLREL 587
            FP +      L  +PS V  +QL++L
Sbjct: 474 AFPKTTTAQCALTKAPSAVDPQQLKDL 500


>gi|329123658|ref|ZP_08252218.1| aspartate--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327469857|gb|EGF15322.1| aspartate--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 518

 Score =  491 bits (1265), Expect = e-136,   Method: Composition-based stats.
 Identities = 181/491 (36%), Positives = 276/491 (56%), Gaps = 7/491 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH CG L  +++G  V LSGWVHR R  GG+IF+D+RD  GI QV  +P        A 
Sbjct: 3   RTHYCGALNRNNIGQDVTLSGWVHRRRDLGGLIFIDMRDRDGIVQVCFDPKYQDALTAAA 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + I G V++R    IN N+ TG++E+ A+++ I + ++   LP+   +   E 
Sbjct: 63  GLRNEFCIQIKGEVIARPENQINKNMATGEVEVLAKELCIYNASD--VLPLDFNQNNTEE 120

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 121 QRLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVP 180

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 181 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +   ++   ME ++  ++ +    +     F  + + +A+RR+G+DKPDLRNP+ M +V 
Sbjct: 240 LTAPEVREIMERMVHDLWLDTIGVD--LGKFPVMTWQEAMRRFGSDKPDLRNPLEMVDVA 297

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VF++  +   G         G    R   D   ++    G  GLA+     
Sbjct: 298 DIVKDVDFKVFNEPANNPNGRVAVIRVPNGAEITRKQIDEYTQFVGIYGAKGLAWAKVND 357

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      P+ K LN    +A+  R++ Q GD  FF A             R  + ++
Sbjct: 358 INAGLEGVQSPITKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTDAMGALRLKLGRD 417

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG+   + ++  W++DFP +E +EE   +   H+PFT P+         D  S  A  YD
Sbjct: 418 LGLTRLDEWQPLWVIDFPMFERDEE-GNLAAMHHPFTSPKDFSPEQLEADPTSAVANAYD 476

Query: 484 LVCNGFEIASG 494
           +V NG+E+  G
Sbjct: 477 MVINGYEVGGG 487


>gi|197294531|ref|YP_001799072.1| aspartyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853858|emb|CAM11820.1| Aspartyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 561

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 201/590 (34%), Positives = 314/590 (53%), Gaps = 29/590 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M    +H   +L + + G  V L G++ R R  G  IFLD+RD  G+ Q++   ++  ++
Sbjct: 1   MKNKYSHYNNELTLQNKGESVFLKGFLFRKRNLGKNIFLDLRDVSGVIQLLVKENNPQYQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              +++ E V+ + G+V+ R     N+ + TG+IE+    + +LS  + LPL VF  ++ 
Sbjct: 61  QITTLKPETVMEVKGVVVER--INKNSKLKTGEIEILVSFVNVLSEPQTLPLNVFQSQDS 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLR   +   +++R  I  S+R  ++  +F+E  TPIL+ S+PEGARD+
Sbjct: 119 LEETRLKYRYLDLRNPDVKHFLIQRHHITQSIRQTLLKNHFLELETPILSKSTPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+  G+FYALPQ+PQ YKQL M +GF++YFQ+A CFRDED R+DR P EF Q+D+E
Sbjct: 179 LVPSRIYPGNFYALPQSPQIYKQLYMIAGFEKYFQVARCFRDEDLRADRQP-EFTQIDIE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF  Q +I+   E ++  +F+     N +S  F  + Y+ A+  YGTDKPDLRNP+ + 
Sbjct: 238 TSFCTQAEIMTLTEEIIIDLFKNIWQQN-LSKPFATLTYNQALELYGTDKPDLRNPLKIF 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           + T          F+     +                R   ++   +  +        + 
Sbjct: 297 DFT--------PFFTSDFGKDNLKGFKVSKTPF--LTRRQVEKYQLFFENNFS-----LK 341

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               E  N    G ++K +   +         +Q+ + CF ++G   K   +    RN +
Sbjct: 342 LLTFEKKNDKITGGISKFIKDNSF--------LQNDEICFVVSGVKEKVHKYLGIFRNKL 393

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A +L +IN N     WI+DFP  E++    +    H+PFT P          D     A 
Sbjct: 394 AADLSLINENQESLLWIVDFPLLEFDASNNRFYSLHHPFTAPCN--LDSLKKDPQKALAL 451

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+  G  R +  E     F  +G S++ ++ +FG L  A Q G PPHGG+A
Sbjct: 452 AYDLVWNGYEVGGGSFRINNPETQGIIFKLLGFSQQEIQKKFGFLIEALQYGTPPHGGLA 511

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G+DR+VML    +N+++V  FP +Q+  DL++ SP  V  EQL+ L L+
Sbjct: 512 LGLDRLVMLFTKTQNIKDVIAFPKTQSAKDLMLDSPGEVDQEQLKILKLK 561


>gi|153823939|ref|ZP_01976606.1| aspartyl-tRNA synthetase [Vibrio cholerae B33]
 gi|126518543|gb|EAZ75766.1| aspartyl-tRNA synthetase [Vibrio cholerae B33]
          Length = 482

 Score =  488 bits (1257), Expect = e-135,   Method: Composition-based stats.
 Identities = 185/487 (37%), Positives = 272/487 (55%), Gaps = 7/487 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  + +    E ++R ++ E  N +    +F  + Y +A+RR+G+DKPDLRNP+ + +V 
Sbjct: 239 MTAEQVRAVTEKMIREMWLELLNVD--LGDFPIMPYSEAMRRFGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     +F+VFS   +   G         G    R   D    +    G  GLA++    
Sbjct: 297 DLLKDVDFKVFSGPANDPKGRVAALCIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVND 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
             +G      PVAK L     +AI  R   Q GD   F A             R    +E
Sbjct: 357 LAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKE 416

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LGI N + +   W++DFP +E +++E  +   H+PFT P          +     +  YD
Sbjct: 417 LGITNESAWAPLWVVDFPMFE-SDDEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYD 475

Query: 484 LVCNGFE 490
           +V NG+E
Sbjct: 476 MVLNGYE 482


>gi|206896522|ref|YP_002247111.1| aspartyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206739139|gb|ACI18217.1| aspartyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 575

 Score =  488 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 201/588 (34%), Positives = 304/588 (51%), Gaps = 26/588 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACF 59
           M+R      GD+    + S V L GWV  VR  G ++F  I+D  GI Q   +       
Sbjct: 1   MNRI---YIGDVKNVKLDSVVELCGWVQYVRDFGKVVFFVIKDRTGIIQCYTSTQSEELL 57

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E+ K +  + V+ + G V  R  + IN N+  G IE+  +  E+L+      LP     E
Sbjct: 58  ELVKKLSIDDVVRVRGTVKRRPEDQINPNMENGDIEIEVEDFEVLNPCAP--LPYDVNGE 115

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E  + KYR++D+R   L  N+  R+ + + +R  +  + F E  TP LT  +P GAR+
Sbjct: 116 PSEFTKLKYRYVDIRHGELLANLKTRSVVSSVIRNYLSRKGFWEIETPYLTKYTPGGARN 175

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+VP R   G FYAL ++PQ +KQ+LM SG DRYFQ A CFRDED R+DR P EF Q+D+
Sbjct: 176 FVVPVRQQPGYFYALAESPQIFKQMLMISGVDRYFQFARCFRDEDLRADRQP-EFTQVDI 234

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SFV ++DI + +E +++ +F E      V   F R+ YD+A+  YG+DKPDLR  + +
Sbjct: 235 EASFVTEEDIYDLVEGMMQELFREVLGVQ-VETPFPRMTYDEAMSLYGSDKPDLRFQMTI 293

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            + T  F  S+F  F  ++      +           +R+    +++ A   G     ++
Sbjct: 294 DDYTNSFSTSKFNAFRNVIERGGVVKGLYWNKP---LDRSALKVLDQAASGSGNK---FL 347

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F     +G           L       +     ++DG +  F AGD      F  + R  
Sbjct: 348 FVSKSANGL----------LTNGPKSVLTEETWLEDG-TYVFAAGDEWDVLPFLGELRLA 396

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + + LG+++ N ++F W+   P +E  E+   +  AH+PFTMP          D L ++A
Sbjct: 397 LGEYLGLLDDNEYKFVWVTSRPMFEIAED-GSLQAAHHPFTMPDVTSIDEIRKDPLKVRA 455

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+V NG EI  G IR H +++    F  +G+S E +E RFG    A  CG PPHGGI
Sbjct: 456 RAYDIVLNGVEIGGGSIRIHKADLQRVVFEILGLSSEQIEERFGFFLDALSCGAPPHGGI 515

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           A G DR+VMLL GA ++R+V  FP +++    L G+P+ +   Q +EL
Sbjct: 516 ALGFDRLVMLLCGADSLRQVIAFPKTKSGTCPLTGAPARLFASQRQEL 563


>gi|153839738|ref|ZP_01992405.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149746736|gb|EDM57724.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 452

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 165/456 (36%), Positives = 244/456 (53%), Gaps = 4/456 (0%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           R +  + +R  +    F++  TP+LT ++PEGARD+LVPSRV++GSFYALPQ+PQ +KQL
Sbjct: 1   RAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYALPQSPQLFKQL 60

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           LM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+  D +    E ++R +++E 
Sbjct: 61  LMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSFMTADQVREVTEKMVREMWQEL 119

Query: 265 SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
            N +     F  + + +AIRR+G+DKPDLRNP+ + +V +     EF+VFS   +   G 
Sbjct: 120 LNVDLGE--FPVMPFSEAIRRFGSDKPDLRNPLELVDVADLVKDVEFKVFSGPANDEKGR 177

Query: 325 EVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
                   G    R   D   E+    G  GLA++      +G      PVAK L+    
Sbjct: 178 VAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVNDRAAGVEGIQSPVAKFLSEDVI 237

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYE 444
             I  R   + GD   F A             R  + ++LG+     +   W++DFP +E
Sbjct: 238 NGILDRTQAESGDIILFGADKANIVAEALGALRLKLGKDLGLTKEGTWAPLWVVDFPMFE 297

Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
            + +E  +   H+PFT P G        +     +  YD+V NG+E+  G +R H +E+ 
Sbjct: 298 ED-DEGNLHAMHHPFTSPLGVTAEELKANPAVANSNAYDMVLNGYEVGGGSVRIHNAEMQ 356

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              F  +GI  E  + +FG L  A + G PPH G+A G+DR+VMLL G +N+R+V  FP 
Sbjct: 357 AAVFDILGIDAEEQQLKFGFLLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFPK 416

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
           +     LL  +PS  +   L EL + +     K  +
Sbjct: 417 TTAAACLLTDAPSIANPAALEELAIAVTAAKAKDAE 452


>gi|54290457|dbj|BAD61344.1| putative aspartyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 604

 Score =  484 bits (1247), Expect = e-134,   Method: Composition-based stats.
 Identities = 192/594 (32%), Positives = 290/594 (48%), Gaps = 84/594 (14%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R   CG+LG  D G  VRL GWV   R H G+ FL +RD                     
Sbjct: 88  RDALCGELGAGDAGRRVRLCGWVALHRAHAGLTFLTLRDRS------------------- 128

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS---VAEELPLPVFG--ERE 119
                                      G ++++A  I +L+    +   P+      + +
Sbjct: 129 ---------------------------GTVQVAADNIYVLNSVTRSLPFPITTADTVKEK 161

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           +PE IR ++R LDLRR  +  N+  R  ++  +R  +                       
Sbjct: 162 FPEEIRLRFRVLDLRRPQMQSNLRLRHNVVKHIRRYLEDR-------------------- 201

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                 V  G FYALPQ+PQ +KQ+LM SGF++Y+QIA CFRDED R+DR P EF QLDM
Sbjct: 202 ---HDFVEPGMFYALPQSPQLFKQMLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQLDM 257

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E++F   +D+L   E ++R +F+E  +   + N F R+ Y +A+ RYGTD+PDLR    +
Sbjct: 258 EIAFTSMEDMLKLNEELMRHIFQEVGDIK-LPNPFPRLTYTEAMNRYGTDRPDLRFDWQL 316

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW--ARSQGQPGLA 357
            +V++ F+ S F++F+  L      +   +P      +     +   +  A   G  GL 
Sbjct: 317 KDVSDAFLGSSFKIFADTLENGGVIKALCVPGGAKEFSNTDLKKGTVYTEASKAGAKGLP 376

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++  ++ ++G + G+GP+   L     E +   LD + GD   F  G+           R
Sbjct: 377 FL--KVMDNGELEGIGPLVASLKPEKKEQLLKHLDAKSGDLILFALGEQSAANRILGRLR 434

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IA +L +I+ +     W+ DFP +EWN +E++ +  H+PFT P         NDL S 
Sbjct: 435 LFIAHKLEVIDTSAHSILWVTDFPMFEWNSDEQRYEALHHPFTAPNPEDM----NDLPSA 490

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A  YD++ NG EI  G +R + S+V  + F  +GIS E  E +FG L   F  G PPHG
Sbjct: 491 RALAYDMIYNGVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDMGAPPHG 550

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DR+VMLL G  ++R+V  FP +      L  +PS V  +QL++LG R 
Sbjct: 551 GIAYGLDRLVMLLAGENSIRDVIAFPKTTTAQCSLTKAPSPVDPQQLKDLGFRT 604


>gi|71894451|ref|YP_278559.1| aspartyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|71851239|gb|AAZ43848.1| aspartyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 566

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 211/582 (36%), Positives = 317/582 (54%), Gaps = 26/582 (4%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L  S +   V L GWV   R  G I F+D+RDH GI Q+V + D         +  E V+
Sbjct: 11  LDESYINKSVTLYGWVATKRKFGKISFVDLRDHSGIIQLVFSEDI-------KLSKESVI 63

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G+V  R  + IN ++ TG IE+   + E+LS ++ELP  +  +    E +R +YRFL
Sbjct: 64  KVTGVVSKR--KDINPSLKTGTIEVLVSEYELLSSSKELPFEISEKISASEDLRMEYRFL 121

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           DLRR+++   I  R+ +  ++R  +  E F+E  TPIL  ++PEGARDFLVP+R +Q +F
Sbjct: 122 DLRRESMQNAISLRSEVFFAIREFLNKEKFLEIETPILAKATPEGARDFLVPTR-SQNNF 180

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           +ALPQ+PQ +KQLLMASGF++Y+QIA CFRDED R DR P EF QLDME+SF+E      
Sbjct: 181 FALPQSPQLFKQLLMASGFEKYYQIARCFRDEDSRKDRQP-EFTQLDMEVSFLEVSAFQK 239

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +EN+ + VF++  N +     F R+ +D  I+ YGTDKPDLR  + + ++  +F    F
Sbjct: 240 LVENLFKYVFKKVLNVDI-QTPFQRLDFDTCIKDYGTDKPDLRFDLKIQDINNYFQEDNF 298

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
            +  K  S    +    I        +     + E A+      L Y    + E+G V  
Sbjct: 299 EIIKKQASKRMLFINEQI-------TKKDFKALEEIAKKNSANILFYF---VLENGKVLH 348

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
                K     + E +    + ++G +CF +A +           R  +   +     N 
Sbjct: 349 SNFANK--APRDVEKLIKDHNFKNG-TCFIVANNFDNASKALGALRVEL-NSMFNYAKNS 404

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
           + F WI+++P +E+NEE +    AH+PFTM +  +E  K      IKA  YDLV NGFE+
Sbjct: 405 YNFSWIINWPMFEFNEESQSYQAAHHPFTMFENTVEEFKTLSKNQIKAKSYDLVLNGFEL 464

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
            SG  R +  EV    F ++G+ K+  E +FG   +AF  G+PPH GI  G+DR++M+L 
Sbjct: 465 GSGSARIYSKEVQELIFESLGMDKKEQEEKFGFFLKAFDYGLPPHCGIGLGLDRLLMILA 524

Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
               +R+V  FP +    D+   +PS +S +QL EL L + +
Sbjct: 525 NKSTIRDVIAFPKNAKNKDIFTKAPSEISSKQLSELFLELKK 566


>gi|256752944|ref|ZP_05493773.1| aspartyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748177|gb|EEU61252.1| aspartyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 448

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 181/454 (39%), Positives = 262/454 (57%), Gaps = 8/454 (1%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           + KN++ R +I   +R  +    FIE  TP+L  S+PEGARD+LVPSR+  G FYALPQ+
Sbjct: 1   MQKNLMTRFKITKVVRDFLNKNGFIEIETPLLIKSTPEGARDYLVPSRIYPGKFYALPQS 60

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           PQ +KQLLM SGFD+Y+QIA C RDED R+DR P EF Q+D+EMSFVE +D+L   E ++
Sbjct: 61  PQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQP-EFTQIDIEMSFVEVEDVLKINEKMI 119

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
             +F+E    + V   F R+ Y +++ R+GTDKPDLR  + + ++++    SEF VF   
Sbjct: 120 AEIFKETLGID-VPIPFKRLSYQESMERFGTDKPDLRFGMELKDLSDIVAQSEFNVFKTA 178

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAK 377
           L  N       +        R   D + E+A++ G  GL +I     E        P  K
Sbjct: 179 LKNNGSVRGINVK-GAASMPRRQLDELVEFAKTYGAKGLLWIQVFEKE-----VKSPATK 232

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
            L+    + I  RL+ + GD    +A          A  R  + +   +I+ N +EF WI
Sbjct: 233 FLSEEEMKKILERLEAEAGDLLLIVADKDEIVFDTLAHLRLELGKRFNLIDENKYEFVWI 292

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           +DFP  E++E EK+    H+PFT P+     L   + L ++A  YD+V NG EI  G IR
Sbjct: 293 VDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEPLKVRAKAYDIVLNGTEIGGGSIR 352

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            H +E+  + F  +G S+E    RFG L  AF+ G PPHGGIA G+DR+ M++ G+  +R
Sbjct: 353 IHDTELQKRMFKVLGFSEEKAWERFGFLMEAFKYGAPPHGGIAYGLDRLAMIITGSDTIR 412

Query: 558 EVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           +V  FP +QN   L+  +PS VS EQL+EL +++
Sbjct: 413 DVIAFPKTQNAVCLMTDAPSEVSEEQLKELHIKV 446


>gi|309807578|ref|ZP_07701530.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308169184|gb|EFO71250.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
          Length = 546

 Score =  484 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 191/530 (36%), Positives = 301/530 (56%), Gaps = 11/530 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT  CG++        V + GWV RVR  G +IF+D+RD  GI QVV N DS  A  ++A
Sbjct: 4   RTDYCGNITSKYENQNVTIYGWVQRVRKLGKLIFIDLRDREGIVQVVVNQDSGDALMDVA 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +E+V+ + G V+ RS   +N  I TG++E++A  I +L+ ++  P  +  +    E
Sbjct: 64  QKLGNEYVVEVQGKVVRRS--NVNKEIKTGEVEINATNIVVLNESKNPPFEIKDDVTAAE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R KYR+LDLRR +L  +I+ R++I++++      E F+   TP L  S+PEGARD+LV
Sbjct: 122 QTRLKYRYLDLRRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  GSFYALPQ+PQ +KQLLM +GFD+Y+QIA C+RDED R DR P EF Q+D+E S
Sbjct: 182 PSRVYPGSFYALPQSPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQP-EFTQVDLETS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+++  +    E +L+ V ++    + V+    RI +D+A+ +YG+DKPD+R  + +H++
Sbjct: 241 FLDEKGVQTYTEGLLKKVMKDVMGIDIVTPI-KRITWDEAMNKYGSDKPDIRYDMHLHDL 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           ++ F  SEF+VFS  LS     +  A+       +R   +   E+ +     G+A++ + 
Sbjct: 300 SDIFKDSEFKVFSDTLSNGGVIKGIAVKGGAEAYSRKKIEEKQEYIKRYHAKGIAWVKYE 359

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                N    GP+A+ L       +    ++  G+    IA             R   A+
Sbjct: 360 -----NGEFTGPIARFLTENQKRDLISEFELTGGELITIIADIWKVVTDSLDYLRRTFAK 414

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E GII  + F+F W++D+P +E++E +++   AH+PFTMP      L   +     A  Y
Sbjct: 415 ETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPHKAHARSY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D+V NG+E+  G IR H  E+  + F  +G +KE    +FG   R+ + G
Sbjct: 475 DIVLNGYELGGGSIRIHKREIQEKMFKALGFTKERAYEQFGFFTRSIRYG 524


>gi|85057873|ref|YP_456789.1| aspartyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|97196521|sp|Q2NIN3|SYD_AYWBP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|84789978|gb|ABC65710.1| aspartyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 576

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 202/597 (33%), Positives = 319/597 (53%), Gaps = 30/597 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M    ++    L +   G  V L G++ R R  G  +F D+RD  GI Q++   ++  ++
Sbjct: 1   MKTKYSYYNNQLTLIHQGKIVFLKGFIFRKRNLGKTLFFDLRDVSGIVQLLVKENNPQYD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               ++ E V+ I G V+ R     N ++ TG IE+    IEILS A+ LPL VF  +E 
Sbjct: 61  KIALIKLETVVQIKGQVIER--INKNPDLPTGDIEILVSHIEILSEAQTLPLNVFQSQES 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLR   +   +++R  I  S+R  ++  +F+E  TPIL+ S+PEGARD+
Sbjct: 119 LEETRLKYRYLDLRNPEVKHFLIQRHHITQSIRQTLLKNDFLELETPILSKSTPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+  G+FYALPQ+PQ +KQL M +GF+RYFQ+A CFRDED RSDR P EF Q+D+E
Sbjct: 179 LVPSRIYPGNFYALPQSPQLFKQLYMIAGFERYFQVARCFRDEDLRSDRQP-EFSQIDIE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ QD+I++  E ++  +F        +   FLR+ Y  A   YG+DKPDLRNP+ + 
Sbjct: 238 TSFLNQDEIMSLTEEIIVDLFANIWK-KPLLQPFLRLTYQQAFELYGSDKPDLRNPLKIT 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN-EWARSQGQPGLAYI 359
           + T  F  + +        +          +K     R   D     +++       +++
Sbjct: 297 DFTTFFDTNTYSQNIFAGKIKGFKV-----SKTAFLTRRKLDEYQLFFSKHFNLKLFSFV 351

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                   N   +G +++ +   +         +++ + CF ++G            R  
Sbjct: 352 K------KNDKIIGGISQFIQDDSF--------LKNEEICFVVSGKKDIIHKALGIFRTK 397

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEE----KKIDFAHNPFTMPQGGMESLKGNDLL 475
           +A +L +++       WI+DFP +E  +E+     ++   H+PFT       ++  ++  
Sbjct: 398 LALDLSLVDTTQEALLWIVDFPLFETIQEDLSPPNRLYSLHHPFTA--PRDATILKSNPQ 455

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              A  YDLV NG+E+  G +R +  +     FS +G  +E V+NRFG L  A + G PP
Sbjct: 456 KALANAYDLVWNGYEVGGGSLRINNHQTQELIFSLLGFLQEEVQNRFGFLIEALKYGTPP 515

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           HGGIA G+DR+VML     N+++V  FP +Q+  DL++ +PS V+ EQL  L L++ 
Sbjct: 516 HGGIALGLDRLVMLFTKTNNIKDVIAFPKTQSAKDLMLEAPSAVNQEQLNTLKLQLK 572


>gi|27904787|ref|NP_777913.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29427402|sp|P59422|SYD_BUCBP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|27904185|gb|AAO27018.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 576

 Score =  483 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 199/578 (34%), Positives = 309/578 (53%), Gaps = 9/578 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAK 63
           RT+ CG L VS VG  ++L GWV++ R    I+F+DIRD  GI QV+ +  S   F+ A 
Sbjct: 2   RTNFCGTLNVSHVGKTIKLCGWVNKFRNLKEILFIDIRDQTGIIQVLFSKKSELLFKKAA 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G+V  R  +  N  + TG+IE+ A +++I + ++   LP+  +    E 
Sbjct: 62  DLRNEFCIQVLGIVQERITKNKNYTMSTGEIEIFALELKIFNKSQP--LPIDLKSCNIEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K+R+LDLR   + +NI+ R  I   +R  M    F++  TPILT S+PEGARD++VP
Sbjct: 120 TRLKFRYLDLRHPNMIRNIIIRNDITIIIRNFMKKNKFLDIETPILTKSTPEGARDYIVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+++  +YALPQ+PQ +KQLLM SG DRY+QIA CFRDED RSDR P EF Q+D+E+SF
Sbjct: 180 SRIHKNKYYALPQSPQLFKQLLMISGIDRYYQIAKCFRDEDLRSDRQP-EFTQIDIEVSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   +E ++  V+ +  N       F ++ + DAI+ YGTDKPDLRNPI + +VT
Sbjct: 239 LNAKKVRKIIERMITSVWNKIINV--HLKKFQKLSFYDAIKMYGTDKPDLRNPIQLIDVT 296

Query: 304 E--HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
              H  ++   +            +     +G   N  + +  +   +   +  L  +  
Sbjct: 297 NIIHVKNNINAITLPNKKTQQNIVIAMCIPRGMSLNINYINSYHHLVQKYTKNKLFNVEV 356

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                          K  +   T  +  +   + GD  F+++             R  + 
Sbjct: 357 LNHCPIKEQKKTSFHKKPSSDLTFQLISKTSAKHGDMIFYLSEKSPLVYEIMGKLRIELG 416

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L +I+ N ++  WI +FP ++ NE   +    H+PFT P+         +   I A  
Sbjct: 417 KDLNLIDYNSWKPLWITNFPLFKKNEL-NQYISTHHPFTAPKYMKIDTSITNYEEIVADS 475

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG+EI SG +R H  E+    F+ +GI+  + +N F     A + G PPH GIA 
Sbjct: 476 YDLVINGYEIGSGSVRIHDLELQKTVFNILGINTVLQKNNFNFFLNALKYGTPPHAGIAL 535

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
           G+DRI MLL  + N+R+V  FP +     L  G+PS +
Sbjct: 536 GLDRITMLLTNSHNLRDVIAFPKTTTGSCLTTGAPSKI 573


>gi|39938614|ref|NP_950380.1| aspartyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|62287572|sp|Q6YR88|SYD_ONYPE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|39721723|dbj|BAD04213.1| aspartyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 586

 Score =  478 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 203/605 (33%), Positives = 319/605 (52%), Gaps = 40/605 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M    +H    L ++  G  V L G++ R R  G  +F D+RD  GI Q++   ++  ++
Sbjct: 1   MKTKYSHYNNQLQLAHQGKTVFLKGFIFRKRNLGKTLFFDLRDVSGIVQLLVKENNPQYD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               ++ E V+ I G V+ R     N ++ TG IE+    IEILS A+ LPL VF  +E 
Sbjct: 61  KIALIKLETVVQIKGQVIER--INKNPDLPTGDIEILVSHIEILSEAQTLPLNVFQSQES 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLR   +   +++R  I  S+R  ++  +F+E  T IL+ S+PEGARD+
Sbjct: 119 LEETRLKYRYLDLRNPEVKHFLIQRHHITQSIRQTLLKNDFLELETLILSKSTPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+  G+FYALPQ+PQ +KQL M +GF+RYFQ+A CFRDED RSDR P EF Q+D+E
Sbjct: 179 LVPSRIYPGNFYALPQSPQLFKQLYMIAGFERYFQVARCFRDEDLRSDRQP-EFSQIDIE 237

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            SF+ QD+I++  E ++  +F        +S  FLR+ Y  A   YG+DKPDLRNP+ + 
Sbjct: 238 TSFLNQDEIMSLTEEIIVDLFANIWK-KPLSQPFLRLTYQQAFELYGSDKPDLRNPLKIT 296

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN-EWARSQGQPGLAYI 359
           + T  F  +         ++          +K     R   D     +++       +++
Sbjct: 297 DFTTFFDTTTCPQNMFSGNIKGFKV-----SKTAVLTRRKLDEYQLFFSKHFNLKLFSFV 351

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                   N   +G +++ +   +         +++ + CF ++G            R  
Sbjct: 352 K------KNDKIIGGISQFIKDDSF--------LKNEEICFVVSGTKDIMHKALGIFRTK 397

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEE--------------KKIDFAHNPFTMPQGG 465
           +A +L +++       WI+DFP +E  +E+               ++   H+PFT P   
Sbjct: 398 LALDLSLVDTTQEALLWIVDFPLFETTQEDLPQPDLTLENSNTSNRLYSLHHPFTAPC-- 455

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
             ++  ++     A  YDLV NG+E+  G +R +  +     FS +G S+E V+ RFG L
Sbjct: 456 DIAILKSNPQKALAKTYDLVWNGYEVGGGSLRINNPQTQELIFSLLGFSQEEVQTRFGFL 515

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             A + G PPHGG+A G+DR+VML     N+++V  FP +Q+  DL++ +PS V  EQL 
Sbjct: 516 VEALKYGTPPHGGLALGLDRLVMLFTKTNNIKDVIAFPKTQSAKDLMLEAPSAVDQEQLN 575

Query: 586 ELGLR 590
            L L+
Sbjct: 576 TLKLK 580


>gi|217033562|ref|ZP_03438991.1| hypothetical protein HP9810_905g81 [Helicobacter pylori 98-10]
 gi|216944087|gb|EEC23518.1| hypothetical protein HP9810_905g81 [Helicobacter pylori 98-10]
          Length = 462

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 180/475 (37%), Positives = 270/475 (56%), Gaps = 16/475 (3%)

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+
Sbjct: 2   NEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDY 61

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D E
Sbjct: 62  LVPSRVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAE 120

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSF  ++D++  +E++L+ +F+     + +S  F R+ Y +A+  YG+DKPDLR  + + 
Sbjct: 121 MSFCSENDVMGVVEDLLQEIFKAIG--HHISKPFKRMPYKEAMENYGSDKPDLRFELPLI 178

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAY 358
            V E F+ S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY
Sbjct: 179 EVGECFMDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAY 238

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  + D        GP+ K L+    + I  +   + GD  FF AGD      +    R 
Sbjct: 239 LQIKED-----GIKGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRL 293

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+ L +I+ +   F W+++FP +E  E        H+PFTMP+             I+
Sbjct: 294 KVAETLDLIDKDALNFLWVVNFPMFEKTE--NGYHAVHHPFTMPKNIECEDI----EEIE 347

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A  YD+V NG E+  G IR H  E+  + F  + I++E  + +FG L  A + G PPHGG
Sbjct: 348 AHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGG 407

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            A G DR++ML+  + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 408 FAIGFDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 462


>gi|296280702|gb|ADH04645.1| unknown [Sorangium cellulosum]
          Length = 587

 Score =  477 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 186/571 (32%), Positives = 288/571 (50%), Gaps = 26/571 (4%)

Query: 44  HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEI 103
             G         +A   +A++VR EWV+ + G+V+ R  + +N  + TG+IE+   +  +
Sbjct: 6   GSGEPYATPEQLAASLRLAETVRREWVIGVRGVVVHRGEQNVNPKLATGEIEVRVAEAVM 65

Query: 104 LSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
            + A+  P  +  +    E IR +YR+LDLRR  L + +  R  +  + R  +  +  +E
Sbjct: 66  FNRADNPPFSIEDDIRTDEEIRLQYRYLDLRRTPLQRALRMRHEVNRATRNYLSDQGCLE 125

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             TP L   +P GAR+FLVPSRV+ G FYAL ++PQ YKQL M +GFDRYFQI  CFRDE
Sbjct: 126 LETPFLVKYTPGGARNFLVPSRVSAGKFYALAESPQLYKQLFMVAGFDRYFQIVKCFRDE 185

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN----TVSNNFLRICY 279
           D R DR P EF Q+D+E+SFV QDD+   +E ++  VF+     +      +  F ++ Y
Sbjct: 186 DLRIDRQP-EFTQIDVELSFVNQDDVFRLIEGLVFAVFKAALGKDLTELYPTGRFPQMPY 244

Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTE---HFVHSEFRVFSKILS----------VNPGYEV 326
            +++ R+G DKPDLR  I   ++T+           ++ ++            V      
Sbjct: 245 AESMARFGNDKPDLRFGIEHTDLTDLIIEHGGGGVPLWVELAEKYRSGKLRRDVPAEIVK 304

Query: 327 WAIPAKGGGGNRAFCDRMNEWARS-QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE 385
             +       +R   + +    R  +G  GLA      D S       P++K +      
Sbjct: 305 ALVIPASANLSRQQTEELERGLRDVKGFRGLARAKLAEDGSWT---QSPLSKSITPELRR 361

Query: 386 AIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC----NCFEFCWIMDFP 441
            +  +L  + GD   F  G      +  A  R  IA+++G+I      + + F W+ + P
Sbjct: 362 QLNEKLGARPGDILCFQFGKAAVVHTVMAKLRVDIAKKIGLIPEYGHGDQWRFLWVTNPP 421

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E +EE  +   AH+ FT P      L   D   ++ ++YDLV NGFE+  G IR H  
Sbjct: 422 LFELDEETGRWAAAHHAFTRPIDEHVPLLEADPARVECYRYDLVLNGFELGGGSIRLHDP 481

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           +V  + F  +GI +    ++FG L  A + G PPHGGIA G+DR+ MLL  A  +R+V  
Sbjct: 482 DVQARVFRTLGIDEGDARDKFGFLLDALRSGAPPHGGIALGMDRLAMLLGSAPTLRDVIP 541

Query: 562 FPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           FP +    D + G+P TV   QL EL ++ V
Sbjct: 542 FPKTNQGTDQMTGAPVTVDAAQLAELNVKTV 572


>gi|148377712|ref|YP_001256588.1| aspartyl-tRNA synthetase (aspartate-trnaligase) (AspRS) [Mycoplasma
           agalactiae PG2]
 gi|148291758|emb|CAL59147.1| Aspartyl tRNA synthetase (Aspartate tRNAligase) (AspRS) [Mycoplasma
           agalactiae PG2]
          Length = 567

 Score =  477 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 218/586 (37%), Positives = 320/586 (54%), Gaps = 28/586 (4%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G L   +VG  V L GWV   R  G + F+D+RD YGI Q V   D         V  E 
Sbjct: 9   GLLTKKNVGEKVYLYGWVSNKRRFGPLTFIDLRDRYGIVQCVFEKDVN-------VTKES 61

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKY 128
           V+ ++GLV+ R     N  I TG IE+   K  ILS +  ELP  +  + E  E I+ KY
Sbjct: 62  VMYVEGLVVKRL--NPNKEIPTGDIEIKVSKYNILSQSVNELPFAIRDDIEVREEIKLKY 119

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR  + K I+ R ++++ +R  +   +F+E  TP L  S+PEGARDFLV +R N+
Sbjct: 120 RYLDLRRPEMQKTILFRAKVMHEIRNFLYENDFVEIETPTLAKSTPEGARDFLVGTR-NK 178

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G F+ALPQ+PQ +KQLLM SGF++Y+QIA C+RDED R DR P EF QLD+E SF++ +D
Sbjct: 179 GQFWALPQSPQLFKQLLMISGFEKYYQIARCYRDEDSRKDRQP-EFVQLDIETSFLKVED 237

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
              T+E +++ +    S G  V   F +I Y DAI+ YG+DKPDLR    + ++      
Sbjct: 238 FHKTIEKLVKRIM--LSAGVNVKIPFQKIKYADAIKDYGSDKPDLRYEYKITDIDNFCAD 295

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++F +     S    +    I       ++     + E A+      L Y       +G 
Sbjct: 296 TDFAIIKDAKSKRILFVDSVI-------SKKEFSILEEIAKKNKANILFYFTVV---NGE 345

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           ++     AK + +   + I    D +DG + F +A             R  +        
Sbjct: 346 ISQTN-FAKKVPLEAKKLINEN-DNKDG-TYFIVANSYENASQALGAVRVELNNMFN-YA 401

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            + + F WI+D+P +E+NE+E K D AH+PFT     ++ L    +  I A  YDLV NG
Sbjct: 402 KDEYRFAWIVDWPMFEFNEDENKWDAAHHPFTRFAHNLDELDKLPIDKINAVAYDLVLNG 461

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           FEIA G  R +  E+  + F+ +G++K   E++FG   +AF  G+PPH GIA G+DR++M
Sbjct: 462 FEIAGGSARIYDKEMQEKMFNLIGLTKAQQESKFGWFLKAFDYGVPPHCGIAFGLDRLIM 521

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           LL   K++R+V  FP +    DLLM +PS V+ +QL ELGL +++ 
Sbjct: 522 LLTKQKSIRDVIPFPKNSKNQDLLMDAPSDVTNDQLAELGLALLKE 567


>gi|167567487|ref|ZP_02360403.1| aspartyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 456

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 257/456 (56%), Positives = 329/456 (72%), Gaps = 10/456 (2%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202
           + R+ I+  +R  M    F E  TPILTASSPEGARDFLVPSR + G FYALPQAPQQ+K
Sbjct: 1   MLRSAIVAELRQAMWEAGFTEFQTPILTASSPEGARDFLVPSRTHPGKFYALPQAPQQFK 60

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           QL M SGFDRYFQIAPCFRDED R+DR PGEFYQLD+EMSFV+Q+D+ +T+E ++RG+F+
Sbjct: 61  QLAMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDIEMSFVDQEDVFSTIEPIIRGIFQ 120

Query: 263 EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNP 322
           +F NG +V+  F RI Y +AIRRYG+DKPDLRNP+ + NVTE F  S FR+F+ +L  N 
Sbjct: 121 KFGNGFSVTEKFPRIPYGEAIRRYGSDKPDLRNPLSLRNVTETFRGSSFRLFADMLRQNA 180

Query: 323 GYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
             EVWAI A GGG  RAFC+++N+WAR QG+PG+AY+       G     GP+AK L+  
Sbjct: 181 MTEVWAIRAPGGG-TRAFCEQVNQWAREQGKPGVAYVI-----DGPSGFSGPIAKALSND 234

Query: 383 NTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPF 442
              +I   L+   GDS FFIAG P  F  FA + R H+A +L +I    FEFCWI DFP 
Sbjct: 235 TISSIASELESVTGDSLFFIAGVPRDFYKFAGELRQHLATKLDLIAKQRFEFCWITDFPM 294

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKG----NDLLSIKAFQYDLVCNGFEIASGGIRN 498
           YEW E+E++IDF HNPF++PQGG E+L+        L++KA+QYD+VCNG E++SG IRN
Sbjct: 295 YEWAEKEQRIDFCHNPFSLPQGGFEALEAAVTVEQQLALKAYQYDIVCNGIELSSGAIRN 354

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
           H+ E+M +AF   G     +E++FGG+ RA Q G PPHGGIA GIDRIVMLL GA N+R+
Sbjct: 355 HVPEIMYKAFEIAGYRPADLEDKFGGMLRALQFGAPPHGGIAPGIDRIVMLLAGASNLRD 414

Query: 559 VSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           V +FPM+Q   DL+MG+PSTV+  QL +L ++IV  
Sbjct: 415 VVMFPMNQQGEDLMMGAPSTVAARQLTDLHIQIVPP 450


>gi|2688349|gb|AAB91506.1| aspartyl-tRNA synthetase (aspS) [Borrelia burgdorferi B31]
          Length = 506

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 199/511 (38%), Positives = 294/511 (57%), Gaps = 9/511 (1%)

Query: 84  TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV 143
            INAN+ TG  E+ A+ IEI+S   ELP  +  +    E+ + +YR+LDLRRD+L   I+
Sbjct: 1   MINANMKTGHFEILAKNIEIISKCNELPFMIEDDNNASENSKLEYRYLDLRRDSLKNKII 60

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
            R +  + +R  +I   F+E  TP    S+PEGARDF++PSR+++GSFYALPQ+PQ YKQ
Sbjct: 61  LRCQATHLIRNFLIKRKFLELETPTFVKSTPEGARDFVIPSRIHKGSFYALPQSPQLYKQ 120

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           L+M +GFD+YFQIA C+RDED R DR P EF QLD+EMSFV++++I   +EN+L  +F+ 
Sbjct: 121 LIMIAGFDKYFQIARCYRDEDSRGDRQP-EFTQLDLEMSFVKKENIFKLIENMLFLIFKN 179

Query: 264 FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
             N N        I Y  A+ +YG+DKPD R  + + +++ +  +SEF +F   L     
Sbjct: 180 CININLPKKFKK-ITYKKAMNKYGSDKPDTRFELELQDISRNLKNSEFNIFKDTLKNKGS 238

Query: 324 YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVN 383
            ++  +  K    +RA  + + E A+     GL +         N    G +AK L    
Sbjct: 239 IKILIVKDKADKFSRAKINNLEEIAKLYKTQGLYFTKIE-----NNKFSGGIAKFLKTEE 293

Query: 384 TEAIRVRLDMQDGDSCFF-IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPF 442
            E I+    +++ D  FF    +    C      R  IA +LG+I+ N FEF W+ DFP 
Sbjct: 294 QELIKT-YSLENNDIIFFTANNNWETACKAMGQIRIKIANDLGLIDENKFEFLWVYDFPL 352

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E++E  K    AH+ F++P+    +    +        YDLV NG E+ SG IR H  E
Sbjct: 353 FEYDENTKTYSPAHHMFSLPKKQYIANLEKNPKKTIGEIYDLVLNGVELGSGSIRIHNKE 412

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +  + F  +G  KE  E+RFG   +A + G P HGGIA GIDR++ML+  + ++++V LF
Sbjct: 413 LQQRIFKIIGFQKEKSEDRFGFFLKALEYGAPNHGGIAIGIDRLIMLMTKSTSIKDVILF 472

Query: 563 PMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           P +      L  SPS +S EQL+ELG+ IV+
Sbjct: 473 PKNSFAASPLDNSPSKISNEQLKELGINIVD 503


>gi|291320375|ref|YP_003515638.1| aspartyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752709|emb|CBH40683.1| Aspartyl tRNA synthetase (Aspartate tRNAligase) (AspRS) [Mycoplasma
           agalactiae]
          Length = 567

 Score =  476 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 218/586 (37%), Positives = 320/586 (54%), Gaps = 28/586 (4%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G L   +VG  V L GWV   R  G + F+D+RD YGI Q V   D         V  E 
Sbjct: 9   GLLTKKNVGEKVYLYGWVSNKRRFGPLTFIDLRDRYGIVQCVFEKDVN-------VTKES 61

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKY 128
           V+ ++GLV+ R     N  I TG IE+   K  ILS +  ELP  +  + E  E I+ KY
Sbjct: 62  VMYVEGLVIKRL--NPNREIPTGDIEIKVSKYNILSQSVNELPFAIRDDIEVREEIKLKY 119

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR  + K I+ R ++++ +R  +   +F+E  TP L  S+PEGARDFLV +R N+
Sbjct: 120 RYLDLRRPEMQKTILFRAKVMHEIRNFLYENDFVEIETPTLAKSTPEGARDFLVGTR-NK 178

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G F+ALPQ+PQ +KQLLM SGF++Y+QIA C+RDED R DR P EF QLD+E SF++ +D
Sbjct: 179 GQFWALPQSPQLFKQLLMISGFEKYYQIARCYRDEDSRKDRQP-EFVQLDIETSFLKVED 237

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
              T+E +++ +    S G  V   F +I Y DAI+ YG+DKPDLR    + ++      
Sbjct: 238 FHKTIEKLVKRIM--LSAGVNVKIPFQKIKYADAIKDYGSDKPDLRYEYKITDIDNFCAD 295

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++F +     S    +    I       ++     + E A+      L Y       +G 
Sbjct: 296 TDFVIIKDAKSKRMLFVDSVI-------SKKEFSILEEIAKKNKANILFYFTVV---NGE 345

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           ++     AK + +   + I    D +DG + F +A             R  +        
Sbjct: 346 ISQTN-FAKKVPLEAKKLINEN-DNKDG-TYFIVANSYENASQALGAVRVELNNMFN-YA 401

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            + + F WI+D+P +E+NE+E K D AH+PFT     ++ L    +  I A  YDLV NG
Sbjct: 402 KDEYRFAWIVDWPMFEFNEDENKWDAAHHPFTRFAHNLDELDKLPIDKINAVAYDLVLNG 461

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           FEIA G  R +  E+  + F+ +G++K   E++FG   +AF  G+PPH GIA G+DR++M
Sbjct: 462 FEIAGGSARIYDKEMQEKMFNLIGLTKTQQESKFGWFLKAFDYGVPPHCGIAFGLDRLIM 521

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           LL   K++R+V  FP +    DLLM +PS V+ +QL ELGL +++ 
Sbjct: 522 LLTKQKSIRDVIPFPKNSKNQDLLMDAPSDVTNDQLAELGLELIKE 567


>gi|198433016|ref|XP_002131496.1| PREDICTED: similar to aspartyl-tRNA synthetase 2, mitochondrial
           [Ciona intestinalis]
          Length = 638

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 191/598 (31%), Positives = 295/598 (49%), Gaps = 20/598 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR+H+CG+L + + G  V L GW+   R      FL +RD +G  Q++        +  +
Sbjct: 56  YRSHTCGELRIKNAGEAVSLCGWLEYKRK----DFLVLRDSFGSVQILITGYEDKNQTFQ 111

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +V+ E V+ + G V +R     N N+ITG+IE+    IEIL+  + LP  V       E 
Sbjct: 112 NVKPESVVKVTGKVTTRPEGQANPNMITGEIEIIPDNIEILNKCKFLPFRVQKFAGKGER 171

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           IR KYR+LD+R D L +N+  R+++++ MR  +    F+E  TP L   +P GAR+F+VP
Sbjct: 172 IRQKYRYLDIRGDILQQNLRLRSKVLSKMRKSLEENCFVEVETPTLFHPTPGGAREFIVP 231

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           S  N G FY+LPQ+PQQ KQLLM  G DRY+Q A C+RDE  + DR   EF QLD+EMSF
Sbjct: 232 SSSNPGKFYSLPQSPQQLKQLLMIGGVDRYYQFARCYRDEPFKRDRQ-VEFTQLDIEMSF 290

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           V+ +D++   E V++  +           +F  I YDDA+ +YG+DKPD R  +++H++T
Sbjct: 291 VDVNDVIKLSEEVIKSSWPR----KFSDESFKLITYDDAMSKYGSDKPDTRFGMLLHDIT 346

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
                +   +F    S     +   +       +  F   +     S       Y    L
Sbjct: 347 TFIPDTLVELFQGDHSDPVNIQAVVVENAQKHFSSKFRRYIGSRMTSAIDDPSPYALLGL 406

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
                         ++  + T+ +   L +   D      G+           R  I++ 
Sbjct: 407 VNGQWSGYHKNT--NIGSMVTKQLVDHLQLGGSDIVVVSWGEKRSAQKTLGALRRIISRI 464

Query: 424 LGII-----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              I     N +  +F W++DFP +E +     +   H+PFT P      L   D L ++
Sbjct: 465 FDEISVKHRNVDLDQFLWVVDFPLFEADPYTGSLCTVHHPFTSPHPDDVHLLEVDPLKVR 524

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG E+  G IR H S++  Q F+ + +           L  A   G PPHGG
Sbjct: 525 SQAYDLVLNGNEVGGGSIRIHDSKLQRQIFTLLNLDFTE----LSYLLEALNSGAPPHGG 580

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           IA GIDRI+ +L G + +R+V  FP +    DL+  SP +++   L+E  ++   + K
Sbjct: 581 IAFGIDRIMSILCGTETIRDVIAFPKNSRGEDLMTNSPISINSNILKEFHIKTNVSDK 638


>gi|24584738|ref|NP_724018.1| CG31739 [Drosophila melanogaster]
 gi|21430724|gb|AAM51040.1| SD02215p [Drosophila melanogaster]
 gi|22946677|gb|AAF53577.3| CG31739 [Drosophila melanogaster]
          Length = 1082

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 192/603 (31%), Positives = 304/603 (50%), Gaps = 29/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L  +D+   V + GW+   R +    F  +RD YG TQV+ +P +   E    
Sbjct: 405 RTHNCGELTSNDINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLSPKTYGLEEYAE 461

Query: 65  --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
             V  E ++ ++G V+ R A TIN  + TG +E+ A K+ +L+ A++       +     
Sbjct: 462 TGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRKFNRAG 521

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
           E +R  +R+LDLR + +  N+  R+ +I  MR  +I    F+E  TP L   +P GA++F
Sbjct: 522 ERLRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 581

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 582 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 639

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF  +DDI+  +E  LR  + +  +   +   F RI Y++A+ +YG DKPD R   +++
Sbjct: 640 LSFTSRDDIMQLIEETLRYSWPK--DFPRLQTPFRRITYEEAMEKYGNDKPDTRFGFLLN 697

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+E    S+               V A  A   G  R   + + +  +         +F
Sbjct: 698 NVSEIIEKSDEFKEKYDDLGAYAIVVRASEAFWNGAARKHYESLGKEFK-------GTLF 750

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN-- 418
            R            + K L       +  + D+++ D  F   G  ++        R   
Sbjct: 751 VRKFGPTK-DVQEKLGKLLGEDVATEVADKFDLEENDLLFLGIGSKVETRELLGRIRLDY 809

Query: 419 --HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES---LKGND 473
              + +   I   N F F W++DFP +E N E  +++  H+PFT+P             +
Sbjct: 810 QDFLVENAKIKKPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDLENFATSCEN 869

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           L SI++  YDLV NG E+  G IR H  ++       +        +    L  A + G 
Sbjct: 870 LESIRSQAYDLVLNGQEVGGGSIRIHDRDMQHFILEQILKIPH---DHLSHLLSALESGC 926

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E++R   L +V+
Sbjct: 927 PPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISDEEMRLYHLSVVD 986

Query: 594 NPK 596
             +
Sbjct: 987 EEE 989



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 4/116 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 234 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLSDTFLS 289

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              + V+ I G V+ R    +N    TG++E+S   +++L+  +    P+  + + 
Sbjct: 290 TPEQTVIQIVGKVLGRPKANVNLKYDTGEVEVSVTSVKVLNPDDPYDGPIKAKEKK 345



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SCG+L     G FV LSG + + R +    F ++RD  G    +   +     +A+ + +
Sbjct: 90  SCGELRNHHCGLFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHPRVARRMNN 146

Query: 68  E---WVLCIDGLVMSRSAETINANIITGQIELSAQKI 101
                 L I GLVM R   + N  + TG+IE+  Q I
Sbjct: 147 MPENTTLTIVGLVMRRPHNSCNQTMPTGEIEVEVQDI 183


>gi|269986733|gb|EEZ93013.1| tRNA synthetase class II (D K and N) [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
          Length = 591

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 209/588 (35%), Positives = 319/588 (54%), Gaps = 18/588 (3%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
            CGDL    V   V L+GW   +R HGG +F+D+ D  GI Q V + D    E AK++  
Sbjct: 4   YCGDLSAELVDKEVTLNGWCRYIRDHGGKLFVDLADRTGIAQAVFDGD--LLEQAKTLGR 61

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL---PVFGEREYPESI 124
           E+V+ I GLV  R  ETI+    TG+ E+  + + I++ AE  P       G+    E +
Sbjct: 62  EYVIRIKGLVKERDKETIDEQNPTGKFEVIVEDLIIINKAETPPFEITDEKGKFLAAEDL 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-GARDFLVP 183
           R KYR+LDLRR  +  NIV R ++    R       F+E  TP L   + E GAR F+VP
Sbjct: 122 RLKYRYLDLRRTEMISNIVFRDKVTKLARQFFWDNGFLELETPTLVKDTYETGARPFIVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR+ +G+FY+LPQ+PQ YKQLLM +G D+YFQ+A  FRDED R DR P EF QLD+E+SF
Sbjct: 182 SRIKKGTFYSLPQSPQIYKQLLMIAGLDKYFQVARAFRDEDQREDRQP-EFTQLDLEVSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            ++  I++ +E+++  + +   N +     F R+ Y +AI+RYG+DKPDLR    + ++T
Sbjct: 241 KDESYIMSLIESLIEKILKSIMNEDI-KLPFKRLQYGEAIKRYGSDKPDLRYDYEIIDIT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM---NEWARSQGQPGLAYIF 360
           E    S + +  ++L      +  +  A  G   R   D M    E A+  G  GL ++F
Sbjct: 300 ESMKKSSYNIIKRVLESGGKVKAASFQADYGKSERITKDFMLNVIEIAKGNGLKGLTWLF 359

Query: 361 WRLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARN 418
               E+G +  +   +A  L+ V    I   L  +DGD   F A  D +         R 
Sbjct: 360 V---ENGKLKSIPEAIAGSLSNVE-NEIIAALKAKDGDIIIFGADLDEMLLLQALGKVRK 415

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I  ++G  + + F F W++DFP +E +   KK++ +HNPFT P      L   +   ++
Sbjct: 416 VIGDKIGKFS-SKFSFLWVVDFPLFEVDSITKKLNPSHNPFTAPFTDDIKLLEKEPEKVR 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
             Q+DLV NG EI  G +R + +++ L+  + +G+ +E   N FG L  A + G P   G
Sbjct: 475 GRQFDLVLNGNEIGGGAVRINNADLQLKILNMIGMQEEEALNTFGFLINALKFGAPEDIG 534

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            A G+DR V +L   +++R+  LFP +++F   + GSP+ +  ++L E
Sbjct: 535 FAIGLDRFVTILKEKQSIRDFILFPKTKSFESPIDGSPTKIEDKRLLE 582


>gi|15828803|ref|NP_326163.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase) (AspRS)
           [Mycoplasma pulmonis UAB CTIP]
 gi|14089746|emb|CAC13505.1| ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LIGASE) (ASPRS)
           [Mycoplasma pulmonis]
          Length = 578

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 197/593 (33%), Positives = 326/593 (54%), Gaps = 27/593 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           + +Y+ +   ++   +VG  + L GW+   R  G + F+D+RD +GI Q+V +       
Sbjct: 13  IKKYKNN---EITSKNVGEELTLFGWIQNERKFGKLTFIDLRDMHGIIQIVFDN------ 63

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +   +  E +L + G V+ R  +  N N+ +G+IE+   + E+L+ ++ELP  +  +   
Sbjct: 64  LTSKLGFETILKVKGKVVLRKEK--NPNLQSGEIEVHVSEYEVLNTSKELPFLIRDDDNS 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  + +YRFLDLR+    K I+ R++ IN++R  +I  +F+E  TPIL+ S+PEGARDF
Sbjct: 122 KEETKLQYRFLDLRKPINTKKIIFRSKFINALRTFLIENDFVEIETPILSKSTPEGARDF 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R N+  F++LPQ+PQ YKQLLMASGF+RYFQIA  FRDED R DR P EF QLDME
Sbjct: 182 LVPTR-NKNKFFSLPQSPQLYKQLLMASGFERYFQIARAFRDEDSRKDRQP-EFSQLDME 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF ++  + +  E +L   FE+ +    +   F R+ +D  ++ YG+DKPDLR  + + 
Sbjct: 240 ISFQDEKVLHSITEKMLVYAFEKMN--IKIEAPFERLSFDYVMQNYGSDKPDLRYEVKIQ 297

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++ ++F  S F + S    +   +    I        +     + E A+  G   L Y  
Sbjct: 298 DLKKYFEKSSFEIISSKKFIKGLFIKEII-------TKNDFKTLEEIAKKNGANILFYSS 350

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               E G ++      K  +  + E I     +++G      +    K        R  +
Sbjct: 351 V---EQGKISRTNFANK--DKESVEKIIEDFSIENGTFFIVASDFENKVLLSLGATRVEL 405

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
                  N + ++F WI+D+P +E++E       +H+PFTM                KA 
Sbjct: 406 NSIFKWANKDQYKFAWIIDWPLFEYDENTNTYSPSHHPFTMYDESTLVDGKISYEKTKAK 465

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG+E+ SG +R +  E+  Q F  + +S++ +E++FG   +AF  G+PPH G+A
Sbjct: 466 SYDLVLNGYELVSGSVRIYKKEIQAQIFKLLNLSQKEIEDKFGFFLKAFDYGLPPHCGLA 525

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            GI+R++M++  ++++REV  FP + +   L+  +PS VS EQL+E+ L++ +
Sbjct: 526 FGIERLIMIMTQSESIREVIAFPKTSSGQALMEDAPSLVSEEQLKEVFLKVEK 578


>gi|58697338|ref|ZP_00372686.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58536284|gb|EAL59797.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 501

 Score =  472 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 237/507 (46%), Positives = 329/507 (64%), Gaps = 19/507 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+ Y+TH+C +L  +DV   V LSGW++R R HG +IF+D+RD YGITQ+V N D   F+
Sbjct: 1   MNCYKTHTCNELRKNDVEKEVTLSGWLYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF----- 115
              +++ E V+ + G+V +R+ +T+N++I TG+IE+    + + S  E            
Sbjct: 61  EISNLKLESVITVTGIVEARTEDTVNSSISTGEIEVIVNNLRVESEVEFHFDEEIAKEER 120

Query: 116 -------GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                  GE+EYPE++RFKYRFLDLRR+ +  NI+ R++II  +R  MI   F+E  TPI
Sbjct: 121 SILASITGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIIAELRKLMIERGFLEIQTPI 180

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+YFQIAPCFRDED R+D
Sbjct: 181 LTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDKYFQIAPCFRDEDARAD 240

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           R PGEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F RI Y +A+ +YG+
Sbjct: 241 RSPGEFYQLDLEMSFVTQEDIFQIIESTLYRVFAKFS-RKSVDKDFPRITYKEAMLKYGS 299

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           DKPDLRNP+++ +VTE F  S F +F   +           P K     R+F D+  E A
Sbjct: 300 DKPDLRNPLLISDVTEIFRDSGFNIFKSNIERGMVVRAIPAP-KTAEEPRSFFDKKIEHA 358

Query: 349 -RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407
            +  G  GL YI +      +    GP+AK L+      IR   +++ GDS FF +    
Sbjct: 359 QKEFGAKGLGYITF----DKDGTAKGPIAKFLDENRLNHIREATNIEPGDSVFFASDKEN 414

Query: 408 KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
           +  + A   R  +  EL +I+ N F+FCWI+DFP++ ++++ KKIDF HNPF+MP GG++
Sbjct: 415 EAANIAGKVRTLLGSELSLIDDNIFKFCWIIDFPYFVYDDKSKKIDFFHNPFSMPHGGLK 474

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASG 494
            L+  + L I A+QYDLVCNG E++SG
Sbjct: 475 DLEDKNPLDILAYQYDLVCNGIELSSG 501


>gi|258546257|ref|ZP_05706491.1| aspartate--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258518523|gb|EEV87382.1| aspartate--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 439

 Score =  472 bits (1214), Expect = e-130,   Method: Composition-based stats.
 Identities = 171/441 (38%), Positives = 253/441 (57%), Gaps = 10/441 (2%)

Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           ++  TP+LT ++PEGARD+LVPSR + G F+ALPQ+PQ +KQ+LM SGFDRY+QI  CFR
Sbjct: 1   MDIETPMLTKATPEGARDYLVPSRTHPGKFFALPQSPQLFKQMLMMSGFDRYYQIVRCFR 60

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
           DED R+DR P EF QLD+E SF+E++DIL  ME ++RG+F+E      ++N F R+ Y +
Sbjct: 61  DEDLRADRQP-EFTQLDIETSFLEEEDILQIMEPMIRGIFKEHLGVE-LANPFPRMTYRE 118

Query: 282 AIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
           A+RRY +DKPDLR P+ + ++ +   +S F+VF+ + + + G  V      G    R   
Sbjct: 119 AMRRYASDKPDLRIPLELVDIDDLVKNSGFKVFASVAAQDNGRVVALKIPGGAKLTRKEI 178

Query: 342 DRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA------IRVRLDMQD 395
           D    +    G  GLAYI    D +       P+ K L             I  R+D Q+
Sbjct: 179 DDYTAYVARYGAKGLAYIKVN-DATNVEGLQSPIVKFLTTEGGAEGAIALDIIKRVDAQN 237

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
           GD  FF A             R  +  +L ++ C+ +   W++DFP +E++E++ +    
Sbjct: 238 GDLIFFGADKASIVNDAIGALRIKVGHDLNMLTCD-WAPLWVVDFPMFEYDEKDGRWYSM 296

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           H+PFT P+         +   + +  YD+V NG EI  G IR H  ++  + F ++GI  
Sbjct: 297 HHPFTQPKTANLDELDTNPGDVLSRAYDMVLNGTEIGGGSIRIHRDDMQQRVFKSLGIGA 356

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
           E  + +FG L  A + G PPHGGIA G+DR++ML+ GAK++R+V  FP +Q     L  +
Sbjct: 357 EEAQEKFGFLLNALKYGCPPHGGIAFGLDRLIMLMAGAKSIRDVMAFPKTQTAWCPLTDA 416

Query: 576 PSTVSVEQLRELGLRIVENPK 596
           PS  S  QLREL +R  +  K
Sbjct: 417 PSEASEAQLRELHIRKRQVEK 437


>gi|194884465|ref|XP_001976268.1| GG22777 [Drosophila erecta]
 gi|190659455|gb|EDV56668.1| GG22777 [Drosophila erecta]
          Length = 1145

 Score =  472 bits (1214), Expect = e-130,   Method: Composition-based stats.
 Identities = 192/603 (31%), Positives = 304/603 (50%), Gaps = 29/603 (4%)

Query: 5    RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
            RTH+CG+L  +D+   V + GW+   R +    F  +RD YG TQV+  P +   E    
Sbjct: 464  RTHNCGELTSNDINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLLPKTEGLEEYAE 520

Query: 65   --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
              V  E ++ ++G V+ R A TIN  + TG +E+ A K+ +L+ A++       +     
Sbjct: 521  TGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRKFNRAG 580

Query: 122  ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
            E +R  +R+LDLR + +  N+  R+ +I  MR  +I    F+E  TP L   +P GA++F
Sbjct: 581  ERLRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 640

Query: 181  LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 641  VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 698

Query: 241  MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            +SF  +DDI+  +E  LR  + +  +   +   F RI Y++A+ +YG DKPD R   +++
Sbjct: 699  LSFTSRDDIMQLIEETLRYSWPK--DFPRLQTPFRRITYEEAMEKYGNDKPDTRFGFLLN 756

Query: 301  NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            NV+E    S+               V A  A   G  R   + + +  +         +F
Sbjct: 757  NVSEIIEKSDDFKEKYEDLGAYAIVVRASEAFWNGAARKHYESLGKEFK-------GTLF 809

Query: 361  WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN-- 418
             R            + K L       I  + D+++ D  F   G  ++  +     R   
Sbjct: 810  VR-KFGPTQDVQEKLGKLLGEDVATEIADKFDLEENDLLFLGIGPKVETRAILGRIRLDY 868

Query: 419  --HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES---LKGND 473
               + +   +   N F F W++DFP +E N E  +++  H+PFT+P             +
Sbjct: 869  HEFLVENAKVKKPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDLDNFATSCEN 928

Query: 474  LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
            L +I++  YDLV NG E+  G IR H  ++       +        +    L  A + G 
Sbjct: 929  LENIRSQAYDLVLNGQEVGGGSIRIHDRDMQHFILEQILKIPH---DHLSHLLSALESGC 985

Query: 534  PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E++R   L +VE
Sbjct: 986  PPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISDEEMRLYHLSVVE 1045

Query: 594  NPK 596
              +
Sbjct: 1046 EEE 1048



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 4/115 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GWV   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 293 RDLTCNDLRRDDVGKTVTLVGWVPSTKNNK---FLQLKDGYGQTQLMIE-DQSLSDTFLS 348

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              + V+ I G V+ R    +N    TG++E+S   +++L+  +    PV  + +
Sbjct: 349 TPEQTVIQIVGKVLGRPKANVNLKYDTGEVEVSVTSVKVLNPDDPYDGPVKTKEK 403



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SCG+L     G FV LSG + + R +    F ++RD  G    +   +     +A+ + +
Sbjct: 149 SCGELRNHHCGLFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHPRVARRMNN 205

Query: 68  E---WVLCIDGLVMSRSAETINANIITGQIELSAQKI 101
                 L I GLVM R   + N  + TG+IE+  Q I
Sbjct: 206 MPENTTLTIVGLVMRRPHNSCNQTMPTGEIEVEVQDI 242


>gi|195999082|ref|XP_002109409.1| hypothetical protein TRIADDRAFT_20832 [Trichoplax adhaerens]
 gi|190587533|gb|EDV27575.1| hypothetical protein TRIADDRAFT_20832 [Trichoplax adhaerens]
          Length = 612

 Score =  471 bits (1213), Expect = e-130,   Method: Composition-based stats.
 Identities = 202/614 (32%), Positives = 309/614 (50%), Gaps = 43/614 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPH-GGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           R+H+CG L   D G  V+L GWV  +R    G  FL + D YG TQ+     S  + I +
Sbjct: 7   RSHTCGQLRKEDAGQEVKLYGWVRHIRRFVNGPFFLTLHDAYGSTQLFVKKTSPVYNILE 66

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPE 122
            +  E V+ I G V +R    IN ++ TG+IE+    + I++ AEELP+ V  +  +  +
Sbjct: 67  KLSVESVIGITGTVNARPENMINKDMPTGEIEVVVDNVNIVNQAEELPIQVSDKGYKAKD 126

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181
            ++ +YR++DLR   L +N+  R+ I+ +MR  +I    F E  TP L   +PEGAR+FL
Sbjct: 127 ELKLQYRYVDLRSSNLQQNLRLRSNIVMAMRKFLIDRAGFAEVETPTLFKRTPEGAREFL 186

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R     FY L Q+PQQ+KQLLM  G DRYFQ A C+RDED R+DR P EF QLD+EM
Sbjct: 187 VPTR-QPELFYTLVQSPQQFKQLLMVGGLDRYFQFARCYRDEDSRADRQP-EFTQLDLEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV Q DI + +E+++  ++    +  +    F R+ + DA+ +YG+DKPD+R  + +H+
Sbjct: 245 SFVNQYDIQSLIEDMIHDIWPITGHKLSTPIPFPRMSFADAVTKYGSDKPDVRFDMKIHD 304

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +TE        +F    S     +   I   GG       ++++++        +  +  
Sbjct: 305 ITEAV----GYLFDVDSSSKATVKASMIVIPGGEN--KELNQIHDFVDKNDTGKITMLRI 358

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R D     +  G ++    +     ++    ++ GD     AG   K        R   A
Sbjct: 359 REDG----SWKGNISSDFQLKLKSQLQNEKAIKPGDLVILSAGVNYKPNLLLGKLRLFCA 414

Query: 422 QELG-----IINCNCFEFCWIMDFPFYEWNEE-EKKIDFAHNPFTMPQGGMESLKGNDLL 475
             L      + + N F+F W+ DFP +  N+E +  I+  H+PFT P     ++   D L
Sbjct: 415 DLLEAKGIQLRDPNEFKFLWVEDFPLFTLNDESDSMIESTHHPFTAPVAEDVNILFTDPL 474

Query: 476 SIKA-------------------FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
            + +                     YDLV NG E+  G IR H   +  Q F  +     
Sbjct: 475 KVSSAIYLCTHNVILIASLSVLGQHYDLVLNGNEVGGGSIRVHDFNLQTQIFEKILKVNA 534

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
              ++F  L +  + G PPHGGIA G DR + +L  + ++R+V  FP S +  DLL  +P
Sbjct: 535 ---SQFKHLLKGLKSGCPPHGGIALGFDRFMAVLCNSSSLRDVIAFPKSASGKDLLTEAP 591

Query: 577 STVSVEQLRELGLR 590
           STVS E L E  +R
Sbjct: 592 STVSNEYLSEYHIR 605


>gi|194246665|ref|YP_002004304.1| aspartyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|193807022|emb|CAP18458.1| Aspartyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 574

 Score =  471 bits (1213), Expect = e-130,   Method: Composition-based stats.
 Identities = 203/595 (34%), Positives = 310/595 (52%), Gaps = 27/595 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+   TH+  DL +  +G  V L GW+   R  G +IFLD+RD  G  Q++   D   ++
Sbjct: 1   MNIKYTHNNNDLNLQHIGEQVYLKGWISNKRNLGKMIFLDLRDFTGNVQLIVKSDHLQYQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-E 119
               ++ E V+ + GLV+ R     N   IT  IE+   ++ ILS A+ LP  +     E
Sbjct: 61  QILCLKIETVVEVKGLVIER--INKNKKSITNDIEVLISELFILSPAKTLPFSINSTSIE 118

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E IR KYR+LDLRR+ +   ++ R  I   +R  ++  +F+E  TP+L+ S+PEGARD
Sbjct: 119 SLEEIRLKYRYLDLRRNEMKLFLITRHNITQIIRQNLLVNDFLELETPLLSKSTPEGARD 178

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSR+  G FYALPQ+PQ +KQL M SGF+RYFQIA CFRDED RSDR P EF Q+D+
Sbjct: 179 YLVPSRLYAGKFYALPQSPQIFKQLYMISGFERYFQIARCFRDEDLRSDRQP-EFTQIDI 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+ + +I++ +EN++  +F++      +S+ FL + Y+ AI  YGTDKPDLR  + +
Sbjct: 238 ETSFLTKKNIMHLIENIMIDLFQKIW-YKNLSSPFLTLTYEKAINTYGTDKPDLRFELPI 296

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            N+T      +  +   I +                      ++     + +    L  +
Sbjct: 297 ENIT--HYLKQEFIQKNIFNSEIRGIKVKKNFSKINLTNKIINKYKSLLKEKYNLNLVTL 354

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK----FCSFAAD 415
                   N    G +++H+N  +             D  FF   D  +           
Sbjct: 355 K-----KENQVIKGFLSQHINDNSFLK---------EDEIFFSFNDYSQDQLYINKALGF 400

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            RN +AQ+L +I+ N     WI DFP +E++ +  +    H+PFT       S+   + +
Sbjct: 401 VRNQLAQDLNLIDYNRESLLWITDFPLFEFDVKTNRYYSTHHPFTA--PKDISIFKKNPI 458

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              A  YDLV NG+EI  G +R +   +    F  +G ++  +E +FG    + + G PP
Sbjct: 459 KSFAQSYDLVWNGYEIGGGSLRINDYSIQQLMFKTLGFTEVEIEKKFGFFIESLKYGTPP 518

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           HGGIA G+DR+ ML     N+R V  FP +Q+  DL++ +P +V  EQL+ L L 
Sbjct: 519 HGGIALGLDRLSMLFNKTNNIRNVIGFPKTQSAKDLMLETPDSVEQEQLKILNLN 573


>gi|307128517|ref|YP_003880547.1| aspartyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306482979|gb|ADM89849.1| aspartyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 565

 Score =  471 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 199/587 (33%), Positives = 319/587 (54%), Gaps = 26/587 (4%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YRT++CG L + DVG  V +SGW+ ++R  G IIF+D+RD YGITQ+         +  
Sbjct: 1   MYRTNNCGVLRLKDVGKNVIMSGWIKKIRNLGSIIFIDLRDMYGITQLNLINYFNNKKKI 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++  E+V+ ++G V+ R ++  N    TG+IE+  +K++IL+ +   P  +    +  E
Sbjct: 61  NNLGREFVIKVEGKVIERLSK--NFKNPTGEIEILVKKLKILNNSLVPPFKIENNTDGNE 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IR KYR+LD+RRD +  NI+ R +I   +R   + ENFIE  TPIL   + +GAR+F V
Sbjct: 119 DIRMKYRYLDIRRDIIKNNIILRNKIYIEIRNFFLKENFIEIETPILINPTTDGARNFYV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P R N G FY+L Q+PQ  KQLLM  G D+YFQI  CFRDED RSDR P EF Q+D EMS
Sbjct: 179 PYRKNPGFFYSLSQSPQLLKQLLMIGGIDKYFQIVKCFRDEDFRSDRQP-EFTQIDCEMS 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV+++DILN  E  +  + ++    N   N F  + Y++A+ +YG+DKPD+R  + +  +
Sbjct: 238 FVDENDILNIFEKFIHFLLKKIKGIN--LNKFPILTYEEAMNKYGSDKPDIRFDMKLFEL 295

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     E+ +    L V   Y++           +       ++ +             
Sbjct: 296 NDFSNQKEY-IMGISLPVCFNYKIIEEILFFFKKKKIKQLIWIKYLKKDKFK-------- 346

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                       +  ++N+   +    R++ + GD    + G+           R  +++
Sbjct: 347 ----------SSIEININL--IKNWAKRINSKCGDLLIILLGEKNIIVKNLGLFRIEMSK 394

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I    F   WI +FP+++WN+E+   +  H+PFT P+         +   IK+  Y
Sbjct: 395 RLNLIKKKIFSPLWIRNFPYFKWNKEKSCYNSLHHPFTSPEIRDLKFLKENPEKIKSKSY 454

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG EI  G IR + S++    F+++G SK+ +E  FG L ++F+ G PPHGGIA G
Sbjct: 455 DLVINGKEIGGGSIRINNSKIQKIIFNHLGFSKKKIEKEFGFLIKSFKYGAPPHGGIAFG 514

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           +DR++ +     N+R+   FP  Q+  DL++ SPS +  ++L++L +
Sbjct: 515 LDRLISVFAYKDNIRDFIAFPKGQDGKDLMIESPSKIEEKELKKLKI 561


>gi|313678619|ref|YP_004056359.1| aspartate--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950297|gb|ADR24892.1| aspartate--tRNA ligase [Mycoplasma bovis PG45]
          Length = 567

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 217/586 (37%), Positives = 321/586 (54%), Gaps = 28/586 (4%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G L   ++G  + L GWV   R  G + F+D+RD YGI Q V   D         V  E 
Sbjct: 9   GLLTKKNLGEKIALYGWVSNKRRFGPLTFIDLRDRYGIVQCVFEKDLN-------VTKES 61

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKY 128
           V+ ++G V+ R   + N+ I TG IE+   K ++LS +  ELP  +  + +  E I+ KY
Sbjct: 62  VMYVEGTVVKRL--SPNSEIPTGDIEIKVSKHKVLSQSVNELPFAIRDDIDVREEIKLKY 119

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR  + K I+ R +I++ +R  +    FIE  TP L  S+PEGARDFLV +R N+
Sbjct: 120 RYLDLRRPEMQKTIMFRAKIMHEIRNFLYENEFIEIETPTLAKSTPEGARDFLVATR-NK 178

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G F+ALPQ+PQ +KQLLM SGF++Y+QIA C+RDED R DR P EF QLD+E SF+  DD
Sbjct: 179 GQFWALPQSPQLFKQLLMISGFEKYYQIARCYRDEDSRKDRQP-EFVQLDIETSFLNVDD 237

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
               +E +++ +    S G  V   FL+I Y DAI+ YG+DKPDLR    + ++ +    
Sbjct: 238 FHKIIEKLVKRIMS--SAGIKVKTPFLKIKYADAIKDYGSDKPDLRYEYKITDINDFCNE 295

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           ++F +     S    +    +       N+     + E A+      L Y       +G 
Sbjct: 296 TDFAIIKDAKSKRMLFVDSIV-------NKKEFSILEEIAKKNKANILFYFTVV---NGE 345

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           ++     AK + +   + I    D +DG + F +A             R  +        
Sbjct: 346 ISQTN-FAKKVPLEAKKLINEN-DNKDG-TYFVVANTYENASQALGAVRVELNNMFN-YA 401

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            + + F WI+D+P +E+NE+E K D AH+PFT     ++ L    +  I A  YDLV NG
Sbjct: 402 KDEYRFAWIVDWPMFEFNEDENKWDAAHHPFTRFAHTLDELDKLSIDKINAIAYDLVLNG 461

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           FEIA G  R +   +  + F+ +G++KE  E++FG   +AF  G+PPH GIA G+DR++M
Sbjct: 462 FEIAGGSARIYDKNMQEKMFNLIGLTKEQQESKFGWFLKAFDYGVPPHCGIAFGLDRLIM 521

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           LL   K++R+V  FP +    DLLM +PS V++EQL ELGL + + 
Sbjct: 522 LLAHQKSIRDVIPFPKNSKNQDLLMDAPSDVTMEQLDELGLVLKDE 567


>gi|114565512|ref|XP_001150025.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 3
           [Pan troglodytes]
          Length = 608

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 180/601 (29%), Positives = 294/601 (48%), Gaps = 62/601 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 226

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 227 LVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 284

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  + + 
Sbjct: 285 MSFVDQTGIQSLIEGLLQYSW--PNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMKII 342

Query: 301 NVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F ++E       LS      +   IP       R   + + ++A       +  +
Sbjct: 343 DISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQEILPV 402

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F   + + N     PVA  +       +   ++ Q+ D     AG+  K CS     R  
Sbjct: 403 FLNANRNWN----SPVANFIMESQRLELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLE 458

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE  + ++ AH+PFT P      L   +
Sbjct: 459 CADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTE 518

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                                       +++                    L +A   G 
Sbjct: 519 PKK----------------------EDVKML------------------SHLLQALDYGA 538

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR++ L+ G++++R+V  FP S    DL+  +P +V  E+L+   +R+ +
Sbjct: 539 PPHGGIALGLDRLICLVTGSRSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRVSK 598

Query: 594 N 594
            
Sbjct: 599 P 599


>gi|326435143|gb|EGD80713.1| hypothetical protein PTSG_01303 [Salpingoeca sp. ATCC 50818]
          Length = 695

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 195/613 (31%), Positives = 307/613 (50%), Gaps = 33/613 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH+CGD+ +S   + V L+GW+   R  G  ++F  +RDHYG  Q+    +    +   
Sbjct: 93  RTHTCGDMTLSLADTSVSLTGWMASKRIIGDDLVFAVLRDHYGAVQLKLTGED-AIDRVT 151

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-----FGER 118
           ++  E  + + G V +R A+ +N  + +G +E+    + +L  A   P  +        +
Sbjct: 152 NLPLESTIQVQGRVTARPADMVNPKMASGDVEVLVSSLAVLGTATNQPFQIGTEGSTTHK 211

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R  +R LDLRR  LH  IV R R+ ++ R  +    F++  TP L   +P GA 
Sbjct: 212 LPKEDVRLTHRPLDLRRPALHNAIVTRARVASATRRFLEHHGFLDIETPTLFKRTPGGAA 271

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVP++  +G FYAL Q+PQQYKQ+LM  GFDRY+Q A C+RDE  R DR P EF Q+D
Sbjct: 272 EFLVPTQ-KKGLFYALVQSPQQYKQMLMVGGFDRYYQFARCYRDEGGRLDRQP-EFTQID 329

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EM+FV Q+D+L   E ++  +++E    +     F R+ + DA+ +YG+DKPD R  + 
Sbjct: 330 LEMAFVTQEDVLQLTEALVASMWKEGCGVDI-PTPFTRMSFHDAMAQYGSDKPDTRFDMK 388

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + + T+ F     RV+ + +S       +          R     + ++AR  G  G   
Sbjct: 389 ITDATDVFSPHAVRVWEQAMSHGGAIRGFKADKAAALFTRKNMKSLEDYAR--GIEGETV 446

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTE----AIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           +F  +D+ G+V     + K ++ V+      A+  R   + GD+    A        F  
Sbjct: 447 VFVHVDDDGSV--RSSIFKDIDDVDVASVKRALVDRFQAKPGDAILLSAAQQSNLLPFLG 504

Query: 415 DARNHIAQEL---GI--INCNCFEFCWIMDFPFYEWNE-EEKKIDFAHNPFTMPQGGMES 468
             R   A  L   G+  ++   F F W++DFP +E +E E+ ++   H+PFT P      
Sbjct: 505 KLRTKAASMLQDAGLQQLDPKDFRFLWVVDFPLFEPHELEKGRLQACHHPFTAPHPDDAD 564

Query: 469 L---KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
           L    G      +A  +D+V NG E+  G IR H  ++ L    ++          F  L
Sbjct: 565 LVRAGGGAATRARAQHFDVVVNGVELGGGSIRVHDPDLQLHILKDIL---HEDPAVFEQL 621

Query: 526 YRAFQCGMPPHGGIAAGIDR--IVMLL-LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
             A + G PPHGGIA G DR  + ML   GA ++R+   FP S    +L+ GSPS V  E
Sbjct: 622 LGALRYGAPPHGGIALGFDRAMLCMLAQTGAVSLRDTMAFPKSFAGKELMSGSPSEVPRE 681

Query: 583 QLRELGLRIVENP 595
            L    ++ V++P
Sbjct: 682 DLLTYHVQTVDSP 694


>gi|114565508|ref|XP_001150144.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 5
           [Pan troglodytes]
          Length = 594

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 184/596 (30%), Positives = 299/596 (50%), Gaps = 66/596 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 226

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 227 LVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 284

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  + + 
Sbjct: 285 MSFVDQTGIQSLIEGLLQYSW--PNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMKII 342

Query: 301 NVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F ++E       LS      +   IP       R   + + ++A           
Sbjct: 343 DISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFA----------- 391

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                           A H N     ++  +L ++  D                 + R  
Sbjct: 392 ----------------ADHFNQC---SLLGKLRLECAD---------------LLETRGV 417

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLKGNDLLSIK 478
           +     + +   F F W++DFP +   EE  + ++ AH+PFT P      L   +    +
Sbjct: 418 V-----LRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTEPKKAR 472

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YDLV NG EI  G IR H +E+     + +      +      L +A   G PPHGG
Sbjct: 473 SQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLKEDVKM---LSHLLQALDYGAPPHGG 529

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           IA G+DR++ L+ G++++R+V  FP S    DL+  +P +V  E+L+   +R+ + 
Sbjct: 530 IALGLDRLICLVTGSRSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRVSKP 585


>gi|294635827|ref|ZP_06714283.1| aspartate--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291090839|gb|EFE23400.1| aspartate--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 440

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 156/436 (35%), Positives = 238/436 (54%), Gaps = 4/436 (0%)

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+Q
Sbjct: 1   MDNHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQ 60

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           I  CFRDED R+DR P EF Q+D+E SF+  + +   ME + R ++ E    +    +F 
Sbjct: 61  IVKCFRDEDLRADRQP-EFTQIDVETSFMSAEQVREIMEELARALWLEIKGVD--LGDFP 117

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            + + +A+RR+G+DKPDLRNP+ + +V +   + +F+VFS   +   G  +      G  
Sbjct: 118 VMTFAEAMRRFGSDKPDLRNPLELVDVADLVKNVDFKVFSGPANDAKGRVIALRVPGGAS 177

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             R   D   ++    G  GLA++      +G      P+AK LN    E I  R   + 
Sbjct: 178 LTRKNIDEYGQFVGIYGAKGLAWMKVNDRAAGMDGVQSPIAKFLNAEVLEGILARCAAES 237

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
           GD  FF A             R  + ++L + +   +   W++DFP +E +  E  +   
Sbjct: 238 GDIIFFGADSAKVATDAMGALRLKVGRDLKLTDETRWAPLWVIDFPMFEED-GEGGLAAM 296

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           H+PFT P+         + +   A  YD+V NG+E+  G +R H   +    F  +GI++
Sbjct: 297 HHPFTSPRDISPEALKANPVGAIANAYDMVMNGYEVGGGSVRIHNGAMQSAVFDILGINE 356

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
           +    +FG L  A + G PPH G+A G+DR+VMLL G +N+R+V  FP +      L  +
Sbjct: 357 QEQREKFGFLLDALKYGTPPHAGLAFGLDRLVMLLTGTENIRDVIAFPKTTAAACPLTDA 416

Query: 576 PSTVSVEQLRELGLRI 591
           PS  +   L+EL + +
Sbjct: 417 PSRANPAALQELSIAV 432


>gi|195483970|ref|XP_002090507.1| GE12772 [Drosophila yakuba]
 gi|194176608|gb|EDW90219.1| GE12772 [Drosophila yakuba]
          Length = 1141

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 191/603 (31%), Positives = 303/603 (50%), Gaps = 29/603 (4%)

Query: 5    RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
            RTH+CG+L  +D+   V + GW+   R +    F  +RD YG TQV+  P +   E    
Sbjct: 460  RTHNCGELTSNDINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLLPKTEGLEEYAD 516

Query: 65   --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
              V  E ++ ++G V+ R A TIN  + TG +E+ A K+ +L+ A++       +     
Sbjct: 517  TGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRKFNRAG 576

Query: 122  ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
            E +R  +R+LDLR + +  N+  R+ +I  MR  ++    F+E  TP L   +P GA++F
Sbjct: 577  ERLRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLVNYLGFVEVETPTLFRRTPGGAQEF 636

Query: 181  LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 637  VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDVE 694

Query: 241  MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            +SF  +DDI+  +E  LR  + +  +   +   F RI Y++A+ +YG DKPD R   +++
Sbjct: 695  LSFTSRDDIMQLIEETLRYSWPK--DFPRLQTPFRRITYEEAMEKYGNDKPDTRFGFLLN 752

Query: 301  NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            NV+E    S+               V A  A   G  R   + + +  +         +F
Sbjct: 753  NVSEIIEKSDDFKEKYEDLGAYAIVVRASEAFWNGAARKHYESLGKEFK-------GTLF 805

Query: 361  WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN-- 418
             R            + K L       I  + D+++ D  F   G  ++  +     R   
Sbjct: 806  VRKFGPTK-DVQEKLGKLLGEDVATEIADKFDLEENDLLFLGIGPKVETRAMLGRIRLDY 864

Query: 419  --HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES---LKGND 473
               + +   +   N F F W++DFP +E N E  +++  H+PFT+P             +
Sbjct: 865  HEFLVENDKVKKPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDLDNFATSCEN 924

Query: 474  LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
            L  I++  YDLV NG E+  G IR H  ++       +        +    L  A + G 
Sbjct: 925  LEIIRSQAYDLVLNGQEVGGGSIRIHDRDMQHFILEQILKIPH---DHLSHLLSALESGC 981

Query: 534  PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E++R   L +VE
Sbjct: 982  PPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISDEEMRLYHLSVVE 1041

Query: 594  NPK 596
              +
Sbjct: 1042 EEE 1044



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 4/115 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 289 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLSDTFLS 344

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              + V+ I G V+ R    +N    TG++E+S   +++L+  +    P+  + +
Sbjct: 345 TPEQTVIQIVGKVLGRPKANVNLKYDTGEVEVSVTSVKVLNPDDPYDGPIKAKEK 399



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SCG+L     G FV LSG + + R +    F ++RD  G    +   +     +A+ + +
Sbjct: 145 SCGELRNHHCGLFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHPRVARRMNN 201

Query: 68  E---WVLCIDGLVMSRSAETINANIITGQIELSAQKI 101
                 L I GLVM R   + N  + TG+IE+  Q I
Sbjct: 202 MPENTTLTIVGLVMRRPHNSCNQTMPTGEIEVEVQDI 238


>gi|158297420|ref|XP_317655.3| AGAP007844-PA [Anopheles gambiae str. PEST]
 gi|157015186|gb|EAA12212.3| AGAP007844-PA [Anopheles gambiae str. PEST]
          Length = 600

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 185/602 (30%), Positives = 294/602 (48%), Gaps = 29/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+CG+L +S VG  V L GW+   R +    F  +RD YG  Q +     +       
Sbjct: 15  RSHNCGELRLSHVGQKVTLCGWLEFSRMNK---FFTLRDGYGTVQALLPEAVSEGFSLDG 71

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPES 123
           +  E +L + G V  R     N    TG+IE+    +E+L+ A++  P+ V       E+
Sbjct: 72  LAFESILRVTGTVQPRPEGQANRTNPTGEIEIHVSGLEVLNEAKKRLPINVKDYNRAKEN 131

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
           +R ++R++DLR   L  N+  R++II  MR  MI +  F+E  TP L   +P GA++F+V
Sbjct: 132 LRLEHRYIDLRNRDLQHNLRLRSQIIMRMRECMINDYGFVEVETPTLFRRTPGGAQEFVV 191

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FY+L Q+PQQ+KQ+LM    DRYFQIA C+RDE  R DR P EF QLD+E+S
Sbjct: 192 PSR-KPGHFYSLVQSPQQFKQMLMVGAIDRYFQIARCYRDESTRPDRQP-EFTQLDIELS 249

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +++ ++  +E VL   +    + N +   F R+   +A+ R+G+DKPD R    + NV
Sbjct: 250 FTDRESVIQLIEQVLTKSW--PYSENPIRAPFPRMTLAEAMERFGSDKPDTRFGYELQNV 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-GGNRAFCDRMNEWARSQGQPGLAYIFW 361
           T+  + +   + + +   +       + A+            + E A+        +  +
Sbjct: 308 TK-TLGAGLTMPAGVRQQDFRVYGVVVRAEEARKLPTGLKKSLEEIAKQSN-----FCKF 361

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN--- 418
              +       GP+ + L   + +A+  +L +Q  D      G      +     R    
Sbjct: 362 TQSKVTPEWSSGPIQRLLGKESADALSEQLSLQPDDLLLLGWGKQTYVQNLMGRIRLATY 421

Query: 419 HIAQELGIINC---NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK----G 471
              +E  +      +   F W++DFP +  NEE  +I+  H+PFT P     +       
Sbjct: 422 EALEERNLAPKRQSHAHNFLWVVDFPMFSENEETGQIESTHHPFTAPHPEDAAALSDGCT 481

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            ++  I++  YDLV NG EI  G IR H S++      +V   +         L  A + 
Sbjct: 482 ENIYKIRSLAYDLVWNGVEIGGGSIRIHNSQLQRTVLKDVLKIEH---AHLHHLLDALES 538

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGG A G+DR V LL  A ++R+V  FP S +  D L  +P  +S E+ R   +++
Sbjct: 539 GAPPHGGFAIGLDRYVALLCNAPSIRDVIAFPKSADGKDPLSKAPVPISEEEKRIYHIQV 598

Query: 592 VE 593
           VE
Sbjct: 599 VE 600


>gi|238810325|dbj|BAH70115.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 569

 Score =  468 bits (1205), Expect = e-129,   Method: Composition-based stats.
 Identities = 203/588 (34%), Positives = 307/588 (52%), Gaps = 30/588 (5%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   D G  V L GWV   R  G + F+D+RD YGITQ V   D         V  E  
Sbjct: 10  ELSAKDKGKKVTLHGWVANKRRFGEMTFIDLRDRYGITQCVFKTDLN-------VTKESS 62

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYR 129
           + + G V+ R  +  N N+ TG IE+   K  I S A EELP  +  + +  E  R KYR
Sbjct: 63  MEVIGKVVLR--KQKNPNLATGDIEVVVDKYTIFSEANEELPFAIRDDIDVKEETRMKYR 120

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           FLDLRR  + +NI+ + +I+ ++R  M   +FI+  TP+L  S+PEGARDFLVP+R N+ 
Sbjct: 121 FLDLRRPVMQQNIITKDKIMFAVREFMHQNDFIDIETPMLAKSTPEGARDFLVPTR-NRD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            F+ALPQ+PQ +KQLLM SGF++Y+Q A CFRDED R DR P EF QLD+E SF+  +D 
Sbjct: 180 EFWALPQSPQLFKQLLMCSGFEKYYQFARCFRDEDSRKDRQP-EFTQLDIETSFLNVEDF 238

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
              +E + + +F+       +   F R+ Y DA+R YGTDKPDLR    + ++ +  +++
Sbjct: 239 QKYIEKLFKHIFKSIG--IKIKTPFPRVKYFDALRDYGTDKPDLRYDYKIVDINDFCLNT 296

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
           +F +     S    +    I        +     + E A+      L Y  +   E+G +
Sbjct: 297 DFNIIKYAPSKRMLFVDTLI-------TKKDFKDLEEIAKKNKANILFYFVY---ENGEI 346

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADARNHIAQELGIIN 428
                     N V   A+ +  + ++ +  +FI  +            R  + +      
Sbjct: 347 VHTN----FANKVKDAALELVKNNKNKNGSYFIVANTYDHASQALGAVRVELNERFNYAR 402

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              +   WI D+P +E++EE      AH+PFT     +E L   ++  ++A  YDLV NG
Sbjct: 403 KE-WNLSWITDWPMFEYDEENNTWAAAHHPFTRFAHSLEELDKIEMKDVRALSYDLVLNG 461

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           FE+ SG  R    +   + F  +G+S++  ++RF    +AF  G+PPH GI  G+DR+ M
Sbjct: 462 FELGSGSARIFDKKTQKKMFDLIGMSEKEQQSRFDWFLKAFDYGIPPHCGIGLGLDRLTM 521

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           ++ G K +R+V  FP +    D+  G+P +V  +QL EL L I +  K
Sbjct: 522 IITGQKTIRDVIAFPKNAKNQDVFTGAPGSVDKKQLDELFLEIKKEDK 569


>gi|119611366|gb|EAW90960.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_a [Homo
           sapiens]
          Length = 608

 Score =  468 bits (1205), Expect = e-129,   Method: Composition-based stats.
 Identities = 179/601 (29%), Positives = 291/601 (48%), Gaps = 62/601 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKNFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 226

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 227 LVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 284

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I + +E +L+  +   ++ + V   F  + + + +  YGTDKPD R  + + 
Sbjct: 285 MSFVDQTGIQSLIEGLLQYSW--PNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFGMKII 342

Query: 301 NVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F ++E       LS      +   IP       R   + +  +A       +  +
Sbjct: 343 DISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEILPV 402

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F   + + N     PVA  +       +   ++ Q+ D     AG+  K CS     R  
Sbjct: 403 FLNANRNWN----SPVANFIMESQRLELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLE 458

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE  + ++ AH+PFT P      L   +
Sbjct: 459 CADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTE 518

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                                       +++                    L +A   G 
Sbjct: 519 PKK----------------------EDVKML------------------SHLLQALDYGA 538

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR++ L+ G+ ++R+V  FP S    DL+  +P +V  E+L+   +R+ +
Sbjct: 539 PPHGGIALGLDRLICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRVSK 598

Query: 594 N 594
            
Sbjct: 599 P 599


>gi|319777419|ref|YP_004137070.1| aspartyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318038494|gb|ADV34693.1| Aspartyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 569

 Score =  468 bits (1204), Expect = e-129,   Method: Composition-based stats.
 Identities = 202/588 (34%), Positives = 306/588 (52%), Gaps = 30/588 (5%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   D G  V L GWV   R  G + F+D+RD YGITQ V   D         V  E  
Sbjct: 10  ELSAKDKGKKVTLHGWVANKRRFGEMTFIDLRDRYGITQCVFKTDLN-------VTKESS 62

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYR 129
           + + G V+ R  +  N N+ TG IE+   K  I S A EELP  +  + +  E  R KYR
Sbjct: 63  MEVIGKVVLR--KQKNPNLATGDIEVVVDKYTIFSEANEELPFAIRDDIDVKEETRMKYR 120

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           FLDLRR  + +NI+ + +I+ ++R  M   +FI+  TP+L  S+PEGARDFLVP+R N+ 
Sbjct: 121 FLDLRRPVMQQNIITKDKIMFAVREFMHQNDFIDIETPMLAKSTPEGARDFLVPTR-NRD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            F+ALPQ+PQ +KQLLM SGF++Y+Q A CFRDED R DR P EF QLD+E SF+  +D 
Sbjct: 180 EFWALPQSPQLFKQLLMCSGFEKYYQFARCFRDEDSRKDRQP-EFTQLDIETSFLNVEDF 238

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
              +E + + +F+       +   F R+ Y DA+R YGTDKPDLR    + ++ +  +++
Sbjct: 239 QKYIEKLFKHIFKSIG--IKIKTPFPRVKYFDALRDYGTDKPDLRYDYKIVDINDFCLNT 296

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
           +F +     S    +    I        +     + E A+      L Y  +   E+G +
Sbjct: 297 DFNIIKYAPSKRMLFVDTLI-------TKKDFKDLEEIAKKNKANILFYFVY---ENGEI 346

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADARNHIAQELGIIN 428
                     N V   A+ +  + ++ +  +FI  +            R  + +      
Sbjct: 347 VHTN----FANKVKDAALELVKNNKNKNGSYFIVANTYDHASQALGAVRVELNERFNYAR 402

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              +   WI D+P +E++EE      AH+PFT     +E L   ++  ++A  YDLV NG
Sbjct: 403 KE-WNLSWITDWPMFEYDEENNTWAAAHHPFTRFAHSLEELDKIEMKDVRALSYDLVLNG 461

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           FE+ SG  R    +   + F  +G+ ++  ++RF    +AF  G+PPH GI  G+DR+ M
Sbjct: 462 FELGSGSARIFDKKTQKKMFDLIGMIEKEQQSRFDWFLKAFDYGIPPHCGIGLGLDRLTM 521

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           ++ G K +R+V  FP +    D+  G+P +V  +QL EL L I +  K
Sbjct: 522 IITGQKTIRDVIAFPKNAKNQDVFTGAPGSVDKKQLDELFLEIKKEDK 569


>gi|293363460|ref|ZP_06610217.1| aspartate--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552980|gb|EFF41733.1| aspartate--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 566

 Score =  468 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 199/595 (33%), Positives = 305/595 (51%), Gaps = 29/595 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M++  T +   L  SD+G  V L G+V   R  G + F+D+RD YGITQ+V   ++    
Sbjct: 1   MNK--TINNNQLRASDIGKKVTLYGFVANKRKFGELSFIDLRDRYGITQLVFKENT---- 54

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              +   E VL + G V  R  E  N  + TGQIE+  +  ++LS+A +LP  V  + E 
Sbjct: 55  ---TFSRESVLEVTGTVALRKEE--NKLLETGQIEILVESYKVLSLANDLPFVVRDDVEV 109

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R +YR+LDLRR  + KN++ + ++ +++R  M   +F+E  TPIL   +PEGARDF
Sbjct: 110 KEENRLQYRYLDLRRPIMQKNLILKNKVFHAIREFMQENDFLEMETPILAKGTPEGARDF 169

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R N+G F+ALPQ+PQ +KQLLM SG +RY+Q A CFRDED R DR   EF QLD+E
Sbjct: 170 LVPTR-NEGKFFALPQSPQLFKQLLMVSGLERYYQFAKCFRDEDSRKDRQL-EFIQLDIE 227

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            S++  ++    +E + + V  +      +   F R+ Y D IR YGTDKPDLR  + + 
Sbjct: 228 TSYLSVENFQAYIEKLFKYVMHKIG--IEIKIPFQRLKYFDCIRDYGTDKPDLRFDLKIQ 285

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           ++ E    ++F +     S         I        +     ++E A+      L Y  
Sbjct: 286 DINEFCNSTDFNIIKNASSKRMLIIEQIIE-------KKTFKNISEIAKKNKVNALFYFA 338

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               +  +      V         + +  + ++ +G + F  A             R  +
Sbjct: 339 IENSKVIHSNFASKV-----QEEVDILIKKQNIVNG-TVFIAADKYESASQALGALRVEL 392

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
              L     + + F WI D+P +E+ EEE +   AH+PFT     +E +K  D   I A 
Sbjct: 393 -NNLFNYARDEYNFSWITDWPMFEFVEEENRWQAAHHPFTQFDNDLEEVKTMDKEKIMAK 451

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NGFE+ SG  R +        F  +G+ K+  E +FG   RAF+ G+PPH GI 
Sbjct: 452 SYDLVFNGFELGSGSARIYNPVEQELMFDMIGLDKKQQEEKFGWFLRAFKYGVPPHCGIG 511

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+DR++M+L   K +R+V  FP +    D++  +P+ +    L E+ + I +  
Sbjct: 512 LGMDRLIMILANQKTIRDVIPFPKNSKGQDVMTDAPNNIEQNSLDEVFITIKDQK 566


>gi|189237891|ref|XP_966901.2| PREDICTED: similar to aspartyl-tRNA synthetase [Tribolium castaneum]
          Length = 1516

 Score =  468 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 180/601 (29%), Positives = 301/601 (50%), Gaps = 30/601 (4%)

Query: 1    MHRY--RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSA 57
            +++Y  RTH+CG+L + +VG  V L GW+   R +    F  +RD YG TQ++    D+ 
Sbjct: 935  INKYTQRTHTCGELRIDNVGQRVVLCGWLEFQRMNK---FAVLRDSYGATQLLVPEEDTK 991

Query: 58   CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-G 116
              ++ +++  E ++ + G V+SR  +  N    TG IE+  +   +L+ A++        
Sbjct: 992  TQKLLQNLPFESIIQVKGTVLSRPTDMKNKKQPTGDIEIFIEHFTVLNKAKDSLPFHIRE 1051

Query: 117  EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPE 175
              +  E++R +YR+LDLR   + +N+  R+ ++  MR  ++  + F++  TP L  ++P 
Sbjct: 1052 HHKAKEALRMQYRYLDLRYPLMQRNLRVRSEMLMKMREFLVNHSGFVDVETPTLFKATPG 1111

Query: 176  GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            GA++F+VP+R   G FY+L Q+PQQ+KQ+LMA   DRYFQIA C+RDE  R DR P EF 
Sbjct: 1112 GAQEFIVPTRF-PGQFYSLVQSPQQFKQMLMAGAVDRYFQIARCYRDEGARPDRQP-EFT 1169

Query: 236  QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            QLD+EMSF + D+IL  +E +L   +  F     +   F R+ + +A+  YG+D+PD R 
Sbjct: 1170 QLDIEMSFTDLDNILQLVEELLGHAWPPFLGP--LPKKFQRMGFGEAMELYGSDQPDTRF 1227

Query: 296  PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
               + N TE    +E  +     S + G      P +    N+   + + + ++    P 
Sbjct: 1228 GFKLENCTELLKLNEKFI----NSDDFGAYCIVFPKEYANLNKGVKENLEKISKQF--PL 1281

Query: 356  LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
            + ++  ++   G +A    + K L       +   +   D    F   G+  +  S    
Sbjct: 1282 VKFVQTKVATPGELAPK--LGKLLGDNVAAKLANHV--SDDCVLFLGFGNKKQTQSLMGK 1337

Query: 416  ARNHIAQELGI----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
             R   A  L      +        W++D P +E  E    +  AH+PFT P      L  
Sbjct: 1338 VRLEYANHLEQLGVSVRAKGMHLLWVVDMPLFEPGESPGSLQSAHHPFTAPNPDDLLLLD 1397

Query: 472  NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
               L +++  +DLV NG EI  G +R H  ++  + F  + I K  ++     +      
Sbjct: 1398 TAPLQVRSLSFDLVLNGNEIGGGSVRIHDPDLQEKIFRMLNIDKNSMQ----HIIDMLSS 1453

Query: 532  GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            G PPHGGIA G+DR++  +L   ++R+V  FP +    D L G+PS VS   L+   ++ 
Sbjct: 1454 GCPPHGGIALGLDRLMSKILNTASIRDVIAFPKTFEGRDPLSGAPSAVSDADLKLYHVKS 1513

Query: 592  V 592
            V
Sbjct: 1514 V 1514


>gi|295698521|ref|YP_003603176.1| aspartyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157053|gb|ADD79498.1| aspartyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 571

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 189/577 (32%), Positives = 301/577 (52%), Gaps = 10/577 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH CG++    +G+ V +SGW+H +R    + FLDIRD  GI Q V +         +S
Sbjct: 3   RTHYCGEVNFFHIGTRVIISGWIHSIRRLKNLTFLDIRDRTGIIQAVCSKKLFPSIFLQS 62

Query: 65  VR--SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++   E+ + I G V     + I+ +++   IE+    I IL+ ++ LP+ + G +   E
Sbjct: 63  LKLNQEFCIRISGKVRE-KRKKISESVLQKNIEVLVHSINILNNSKNLPIDIIGRKISSE 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++ KYR+L LR   ++K +V R+ I + +   M    F+   TP L+  +  GA+DFLV
Sbjct: 122 EMQLKYRYLYLRNPDMNKTLVIRSEITHFIHQFMHKNKFVNIETPYLSNPTDGGAKDFLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR     +YAL Q+PQ +KQ+LM SGFDRY+QIA CFRDED RS+R P EF QLDMEMS
Sbjct: 182 PSRTKHNHYYALAQSPQMFKQILMISGFDRYYQIAKCFRDEDSRSNRQP-EFTQLDMEMS 240

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV    I   +E  +R ++++    + + N F  I ++DAI++YGTDKPDLRNP+ + ++
Sbjct: 241 FVNSKKIKKIIERFIRKLWKKILKYD-LPNCFPTITFEDAIQKYGTDKPDLRNPLELVDI 299

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T      +     +  S      +  I             +  + +          + + 
Sbjct: 300 TYLTSSFDKP--KRKFSNEDSCILIHIKQVLKDIKSIQLKKYQQLSLKFKIKNFLILEFS 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D          +     +    +IR    +++GD      G       F    R+ +A+
Sbjct: 358 SDFLNQTVKKNLLG--FPVELFYSIRSNFQIKEGDVICVGIGKKPLLNQFMGHLRSKLAK 415

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL I   N ++  W++DFP ++  E++  +   H+ FT P+    S   ++ +   +  Y
Sbjct: 416 ELDISEKNVWKPIWVIDFPMFK-EEKDGCLKPVHHVFTSPKLCDISKLYSNPIRTVSDSY 474

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+V NG E+ SG +R +  E+  + F  + I++E  +NRFG    A Q G+PPH G A G
Sbjct: 475 DMVINGQELGSGSVRIYKKEIQEKIFQILKINEEDQKNRFGFFLEAMQYGVPPHAGFAFG 534

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
           +DRIVML+L  KN++ V  FP + +   L+  SPS +
Sbjct: 535 LDRIVMLMLNQKNIKNVIAFPKTTSASCLMTNSPSKI 571


>gi|240047691|ref|YP_002961079.1| Aspartyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985263|emb|CAT05276.1| Aspartyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 571

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 204/584 (34%), Positives = 317/584 (54%), Gaps = 23/584 (3%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L    +   VR+ GW    R      F+++RD++GI QVV   D A  EI K      V+
Sbjct: 8   LSQYYINQKVRIFGWASNFRKFKDKTFIELRDYWGIVQVVVPKDIAHSEIKKE----SVI 63

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G V+ RS   IN  I  G +E+ A+KIE++S A ELP  +  +    E +R +YRFL
Sbjct: 64  SVYGTVVIRS--NINNKIPNGNLEIIAEKIELISPANELPFEIQDDINANEDLRLEYRFL 121

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           DLRR+ + +N++ R + I+ +R  +   +F+E  TPIL+ S+PEGAR F+VP+R  Q  F
Sbjct: 122 DLRRNEMKQNLIFRYKFIHQIRQFLYENDFVEIETPILSKSTPEGARSFIVPTR-KQNHF 180

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           +ALPQ+PQ YKQLLM SGF+RYFQ A  FRDED R DR   EF QLDME +F   + I  
Sbjct: 181 FALPQSPQLYKQLLMVSGFNRYFQFARAFRDEDLRKDRQ-FEFTQLDMEFAFPTIESIQK 239

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +E +++    +F      + +F +I Y +AI +YG+DKPDLR    + + +E     EF
Sbjct: 240 NIEQLVKHSLRKF--DFQFNEDFPQISYKEAIDKYGSDKPDLRFKNYLIDASELDDDQEF 297

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
                        +   +  +    ++     ++E         L YI  +   + NV  
Sbjct: 298 LF---------SGKTKVVFLENKHISKQDYKILSEIIVQNKANRLLYIHIK---NANVDF 345

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
                +   +        +   Q+G + F ++    K        RN IAQ   +I+ + 
Sbjct: 346 YSFKTQPSLVDKISNFVSKHQFQNG-TLFIVSDSYEKTTQSLGALRNKIAQMYDLIDTSS 404

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
            +F WI+D+P +E +EE +KI  AH+PFTM       L  ++ L+ +A  YDLV NGFEI
Sbjct: 405 LKFAWIIDWPMFEKDEETQKISAAHHPFTMVDKESVYLLDSNPLAARAQAYDLVLNGFEI 464

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G IR    ++  + F  +G+S++  + +FG L +AF  G+PPHGG A G+DR +M+L 
Sbjct: 465 GGGSIRIVDKKIQEKIFKIIGLSEQEAKQQFGFLLKAFSYGVPPHGGFAFGLDRFIMILR 524

Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            A ++R+V  FP++    D+L+ SP+ ++ +QL+E  ++ ++  
Sbjct: 525 NASSIRDVIAFPVNSKGQDMLLSSPTNLTNQQLQEYFIQNIKEK 568


>gi|195115020|ref|XP_002002065.1| GI14195 [Drosophila mojavensis]
 gi|193912640|gb|EDW11507.1| GI14195 [Drosophila mojavensis]
          Length = 1190

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 190/602 (31%), Positives = 300/602 (49%), Gaps = 29/602 (4%)

Query: 5    RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
            RTH+CG+L  +D+   V + GW+   R +    F  +RD YG TQV+  P +   E    
Sbjct: 479  RTHNCGELTSNDINEKVVVCGWLEFQRMNK---FFILRDAYGQTQVLILPKTKGLEEYAE 535

Query: 65   --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
              V  E ++ ++G V+ R A TIN  + TG +E+ A KI++L+ A++       +     
Sbjct: 536  TGVPIESIVRVEGTVIPRPAATINPKMTTGHVEIEADKIDVLNAAKKNLPFEIRKFNRAG 595

Query: 122  ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
            E +R  +R+LDLR + +  N+  R+ +I  MR  +I    F+E  TP L   +P GA++F
Sbjct: 596  ERLRLTHRYLDLRFNDMQHNLRLRSAVIMRMREYLINYLGFVEVETPTLFRRTPGGAQEF 655

Query: 181  LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 656  VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 713

Query: 241  MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            +SF  +DDI+  +E  LR  + +  +   +   F RI Y++A+ +YGTDKPD R   +++
Sbjct: 714  LSFTSRDDIMQLIEETLRYSWPK--HLPKLQTPFRRITYEEALEKYGTDKPDTRFCFLLN 771

Query: 301  NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            NV++    SE               V A  A   G  R   + +++         L    
Sbjct: 772  NVSDIIEKSENFKGKYNDFSAYAIVVRASEAFWNGAARKHYESLSK----AFSGTLFVRK 827

Query: 361  WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN-- 418
            +   +         + K L       I  + D+++ D  F   G   +  +     R   
Sbjct: 828  FNFAKD----VQERLTKLLGTEVAIEIIEKFDLEENDLLFLCIGPKDETRNLLGRIRVDY 883

Query: 419  --HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN---D 473
               + + +     N + F W++DFP +E N    +++  H+PFT P             +
Sbjct: 884  HDFLVENVKTKKPNEYRFLWVVDFPLFERNRVTNQLESVHHPFTAPLVEDLDKFATSCDN 943

Query: 474  LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
            L SI++  YDLV NG E+  G +R H  ++       V        +    L  A + G 
Sbjct: 944  LESIRSEAYDLVLNGQEVGGGSMRIHDRDMQQFILEQVLKIPH---DHLAHLLSALESGC 1000

Query: 534  PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E ++   + I E
Sbjct: 1001 PPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISEEDMKLYHINIQE 1060

Query: 594  NP 595
              
Sbjct: 1061 TE 1062



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 4/116 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 307 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLMDTFMS 362

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              + VL I G V+ R    IN    TG++E+S   +++L+  +    P+  + + 
Sbjct: 363 TPEQTVLQIVGKVLGRPKANINLKYDTGEVEVSVTSVKVLNPDDPYEGPIKVKEKV 418



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SCG+L     G FV LSG + + R +    F ++RD  G    +   +     +A+ + +
Sbjct: 163 SCGELRNHHCGMFVELSGRLFKKRVNR---FAELRDRNGGACQLVVLEDKHPRVARRMNN 219

Query: 68  E---WVLCIDGLVMSRSAETINANIITGQIELSAQKI 101
                 L I G VM R   + N  + TG+IE+  Q I
Sbjct: 220 MPENTTLTIVGQVMRRPHNSCNQTMPTGEIEVEVQDI 256


>gi|195052814|ref|XP_001993375.1| GH13102 [Drosophila grimshawi]
 gi|193900434|gb|EDV99300.1| GH13102 [Drosophila grimshawi]
          Length = 1125

 Score =  466 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 192/602 (31%), Positives = 308/602 (51%), Gaps = 29/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L  +++   V + GW+   R +    F  +RD YG TQV+  P +   E    
Sbjct: 416 RTHNCGELTSNEINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLILPKTKGLEEYAE 472

Query: 65  --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
             V  E ++ ++G V+ R A T+N  + TG +E+ A K++IL+ A++       +     
Sbjct: 473 SGVPIESIVRVEGTVIPRPAATVNPKMNTGHVEIEADKVDILNAAKKNLPFEIRKFNRAG 532

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
           E +R  +R+LDLR + +  N+  R+ +I  MR  +I    F+E  TP L   +P GA++F
Sbjct: 533 ERLRLTHRYLDLRFNDMQHNLRLRSAVIMRMREYLINYLGFVEVETPTLFRRTPGGAQEF 592

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 593 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 650

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF  +DDI+  +E  LR  + +  +   +   F RI Y++A+ +YG DKPD R   +++
Sbjct: 651 LSFTSRDDIMQLIEETLRYSWPK--HLPKLQTPFRRITYEEAMEKYGNDKPDTRFGFLLN 708

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+E    SE               V A  A   G  R   + +   A++   PG  ++ 
Sbjct: 709 NVSEIIEKSENFKDKYENFSAYAIVVRASDAFWNGAARKHYEGL---AKAF--PGTLFVR 763

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN-- 418
            + + + +V     + K L       I  + D+++ D  F   G  ++  +     R   
Sbjct: 764 -KFNFAKDVQER--LTKLLGTEVATEIIEKFDLEENDLLFLCIGPKVEARNLLGRIRLDY 820

Query: 419 --HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN---D 473
              + + +     N + F W++DFP +E N    K++  H+PFT P             +
Sbjct: 821 HEFLVENVKTKKPNDYRFLWVVDFPLFERNPTTNKLESVHHPFTAPLVEDLDKFATSCDN 880

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           L +I++  YDLV NG E+  G +R H  ++       V        +    L  A + G 
Sbjct: 881 LETIRSEAYDLVLNGQEVGGGSMRIHDRDMQQFILEQVLKIPH---DHLSHLLAALESGC 937

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E+++   L I E
Sbjct: 938 PPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISEEEMKLYHLAIQE 997

Query: 594 NP 595
             
Sbjct: 998 AE 999



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 4/115 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 240 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLMDTFLS 295

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              + VL I G V+ R    IN    TG++E+S   +++L+  +    P+  + +
Sbjct: 296 TPEQTVLQIVGKVLGRPKANINLKYDTGEVEVSVTNVKVLNPDDPYEGPIKVKEK 350



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SCG+L     G FV LSG + + R +    F ++RD  G    +   +     +A+ + +
Sbjct: 96  SCGELRNHHCGMFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHPRVARRMNN 152

Query: 68  E---WVLCIDGLVMSRSAETINANIITGQIELSAQKI 101
                 L I G VM R   + N  + TG+IE+  Q I
Sbjct: 153 MPENTTLTIVGQVMRRPHNSCNQTMPTGEIEVEVQDI 189


>gi|47459109|ref|YP_015971.1| aspartyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|47458438|gb|AAT27760.1| aspartyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 567

 Score =  464 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 198/582 (34%), Positives = 314/582 (53%), Gaps = 23/582 (3%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           + +  V   V + G+V ++R  G IIF+D+RD  GI Q+V    +  F        E +L
Sbjct: 9   ITIKHVDEKVTVYGFVEKIRKLGEIIFVDLRDESGILQIVFESSNIDF------TKESIL 62

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G+V  R  ++IN N+ TG+IE+     ++LS+AEELP  +    E  E +R KYRFL
Sbjct: 63  EIIGIVSKR--KSINTNLQTGEIEIKVNSYKVLSLAEELPFEINSSNETNEELRLKYRFL 120

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           DLR   L +NI  R ++  SMR  +   N+I   TP L   +PEGA+DF+VPSR  +G F
Sbjct: 121 DLRSKKLQENIRLRHKVTRSMRNFLDRNNYINIETPNLGRITPEGAKDFIVPSR-KKGFF 179

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           ++LPQ+PQ YKQLLMASGF++Y+QIA  FRDE  R DR   EF QLD+EM++ +++ +++
Sbjct: 180 FSLPQSPQLYKQLLMASGFEKYYQIARAFRDEKSRKDRQL-EFTQLDIEMAYAKEEIVIH 238

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +EN+ + +F + +    +   F ++ YDDA+ +YG+DKPDLR    + + +        
Sbjct: 239 LIENLFKEIFTDLN--IDIKIPFPKMNYDDALNQYGSDKPDLRYEYKLQDFSHLIPKFNS 296

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
           +VF  + S+      + I        +   + + E A+     GL Y  +  +++ +   
Sbjct: 297 KVFKNVKSLKIIIIPYNI-------TKKQFEFLEEEAKQNHSKGLLYANFEKNKAISGNF 349

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
                  L I+  E    + + ++  +   IA D           R  +  E        
Sbjct: 350 FQFFKSELEIIQGEL---KHNFKEKFAILAIADDLEIVNQALGSVRVKL-DEFFDFEKKD 405

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
           F F W++++P YE+++E  K   AH+PFTMPQ           +  K+  YD+V NG+E+
Sbjct: 406 FAFTWVINWPLYEFDKEVNKFQAAHHPFTMPQLEYLDNFDKKPMEAKSRAYDIVLNGYEV 465

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G IR +  E+  + F  +G+S++ +E +F     AF+ G PPHGGIA GIDR++ +L 
Sbjct: 466 GGGSIRINDLEIQKRMFRTLGLSEKQIEEQFDFFLTAFKYGFPPHGGIALGIDRLLSILT 525

Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            + ++R+V  FP +    D    +PS +  E L+E G+ I E
Sbjct: 526 NSTSIRDVIAFPKNSKGIDPFTKAPSKLENELLKEYGIIIKE 567


>gi|194760025|ref|XP_001962242.1| GF15370 [Drosophila ananassae]
 gi|190615939|gb|EDV31463.1| GF15370 [Drosophila ananassae]
          Length = 1132

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 186/595 (31%), Positives = 299/595 (50%), Gaps = 29/595 (4%)

Query: 5    RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
            RTH CG+L  S++   V + GW+   R +    F  +RD YG TQV+ +  +   E    
Sbjct: 471  RTHHCGELTSSEINDKVVICGWLEFQRMNK---FFILRDAYGQTQVLLSAKTKGLEDYAE 527

Query: 65   --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
              V  E ++ ++G+V+ R A TIN  + TG +E+ A K+ IL+ A++       +     
Sbjct: 528  TGVPIESIVRVEGIVIPRPAATINPKMQTGHVEVDADKVTILNPAKKNLPFEIRKFNRAG 587

Query: 122  ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
            E +R  +R+LDLR + +  N+  R+ +I  MR  +I    F+E  TP L   +P GA++F
Sbjct: 588  ERLRLTHRYLDLRFNDMQHNLRLRSTVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 647

Query: 181  LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 648  VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDVE 705

Query: 241  MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            +SF  +DDI+  +E VLR  + +  +   +   F RI Y++A+ +YG DKPD R   +++
Sbjct: 706  LSFTNRDDIMQLIEEVLRYSWPK--DLPRLQTPFRRITYEEAMEKYGVDKPDTRFGFLLN 763

Query: 301  NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            N+TE     +               V    A   G  R   + + +        G  ++ 
Sbjct: 764  NITEIIEKCDEYKTKFEDLGAYAIVVRGTEAFWNGSARKHYESLGKT-----FKGTLFVR 818

Query: 361  WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN-- 418
              +           + K L     + +  + D+++ D  F   G  ++  +     R   
Sbjct: 819  KIVSTK---DVQEKLGKFLGEDVAKEVTEKFDLEENDLLFLGIGPKVETRTLLGRIRLDY 875

Query: 419  --HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES---LKGND 473
               + +       N F F WI+DFP +E N E K+++  H+PFT+P             +
Sbjct: 876  RDFLLENGRAKRHNDFRFLWIIDFPLFERNPETKQLESVHHPFTLPHADDLDNFATSCEN 935

Query: 474  LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
            + +I++  YDLV NG E+  G IR H  ++       +        +    L  A + G 
Sbjct: 936  MENIRSQAYDLVLNGQEVGGGSIRIHDRDMQHFILEQILKIPH---DHLSHLLSALESGC 992

Query: 534  PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
            PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E+++   
Sbjct: 993  PPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISDEEMKLYH 1047



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 4/115 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 309 RDITCNDLRRDDVGKTVTLVGWIPSSKNNK---FLQLKDGYGQTQLMIE-DKSLMDTFMS 364

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              + +L I G V+SR    +N    TG+IE+S   ++I++  +    P+  + +
Sbjct: 365 TPEQTLLQITGKVLSRPKANVNLKYDTGEIEVSVTNVKIINPDDPYDGPIKAKEK 419



 Score = 60.5 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 6/126 (4%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SCG+L     G FV L+G + + R +    F ++RD  G    +   +     +A+ + +
Sbjct: 165 SCGELRNHHCGLFVELTGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHPRVARRMNN 221

Query: 68  E---WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
                 L I G VM R   + N  + TG+IE+  Q I  +            +R Y    
Sbjct: 222 MPENTNLTIVGQVMRRPHNSCNQTMPTGEIEVEVQDILNIHFPTTGTKRAGDKRTYSTMA 281

Query: 125 RFKYRF 130
           + +   
Sbjct: 282 QQQNHH 287


>gi|301603688|ref|XP_002931512.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Xenopus
           (Silurana) tropicalis]
          Length = 620

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 187/602 (31%), Positives = 295/602 (49%), Gaps = 55/602 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L  + VG  V L GW+   R     +F+ +RD +G+TQV+   D  C ++ K 
Sbjct: 55  RTHTCGELCSAHVGQEVALYGWLQYQRH---DLFVVLRDFHGLTQVILPQDEKCSQLRKM 111

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +     E V+ + G V+ R     N  + TG+IE+ A++  IL+  ++LP  +    +  
Sbjct: 112 LSEASLESVVVVKGTVIRRPPGQDNPRMSTGEIEVLAKEAHILNTCKKLPFEIKDAVKKT 171

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LD+R   L  N+  R++I+  MR  +     F++  TP L   +P GA++F
Sbjct: 172 EALRMQYRYLDIRSGQLQSNLRLRSKIVMKMREYLCNLHGFVDVETPTLFKRTPGGAKEF 231

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R   G FY+LPQ+PQQ+KQLL+  G DRYFQIA C+RDE  + DR P EF Q+D+E
Sbjct: 232 VVPTR-EPGKFYSLPQSPQQFKQLLIIGGLDRYFQIARCYRDEGSKPDRQP-EFTQVDIE 289

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+                                    A              +++ 
Sbjct: 290 MSFVD-------------------XXXXXXXXXXXXXXXXXACTL-----------LVIQ 319

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAY 358
           +VT  F   +     + L   P   V AI   GG     R   D M E  + Q    +  
Sbjct: 320 DVTSQFREVQLGYVQETLR-KPHGCVKAICIPGGAKFIKRKELDSMQELVKQQYNQEVVP 378

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +  R D     +   P+ K L+    E++   ++ +  D   F AG+ ++ CS     R 
Sbjct: 379 VILRAD----SSWKSPLEKFLSAKLKESLTDAMEAKSEDILLFAAGEHIRACSALGKLRL 434

Query: 419 HIAQELG-----IINCNCFEFCWIMDFPFYEWNEE-EKKIDFAHNPFTMPQGGMESLKGN 472
             A +L      + +   F F W++DFP +   E+ E +++ AH+PFT P     +L   
Sbjct: 435 DAAAQLEEYGVPLRDPTAFHFLWVVDFPLFLPKEDNELELESAHHPFTAPHPEDTALLHT 494

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D   +++  YDLV NG E+  G IR H S +      +V      +      L  A Q G
Sbjct: 495 DPAKVRSQHYDLVLNGSEVGGGSIRIHNSNLQRWVLQDVLKEDVSL---LSHLLEALQSG 551

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G+DR++ +++GA ++R+V  FP S    DL+  +P  VS E L++  ++++
Sbjct: 552 APPHGGIALGLDRLIAIIVGAPSIRDVIAFPKSFRGRDLMSNAPDMVSAEDLQQYHIQVI 611

Query: 593 EN 594
             
Sbjct: 612 PP 613


>gi|291240797|ref|XP_002740304.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 700

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 195/661 (29%), Positives = 308/661 (46%), Gaps = 83/661 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAK 63
           R+H+CG+L  S +G  V L GWV   R       L ++D YGITQ V AN  +    +  
Sbjct: 52  RSHTCGELRASHIGEPVTLYGWVQYKR---FDFMLTLKDAYGITQIVAANTQNCISSVLS 108

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPE 122
            +RSE V+ I G V  R  E IN  ++TG+IE+ A+ IE++S  ++  P       +  E
Sbjct: 109 KIRSESVIKITGKVQPRQNEQINKEMLTGEIEVLAEDIELISECKDKLPFQPKDHAKVKE 168

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181
           S+R +YR+LD+R   + +N+  R+RI   MR  +   + F+E  TP +   +P G+++F+
Sbjct: 169 SLRMQYRYLDIRTSKMQENLRLRSRIAMKMREFLCNHHGFVEVETPTMFKQTPGGSQEFV 228

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP---------------- 225
           +P+R +   FY LPQ+PQQ+KQLLM  G DRYFQ A C+RDE                  
Sbjct: 229 IPTR-HPERFYCLPQSPQQFKQLLMVGGLDRYFQFARCYRDEGTKPDRQPEFTQVSRNLV 287

Query: 226 ----------------------RSDRLP------------------GEFYQLDMEMSFVE 245
                                 R DR P                   EF Q+D+EMSFV 
Sbjct: 288 HIARPDRQPEFTQVSPNLVHIARPDRQPEFTQVSSNLVHIARPDRQAEFTQVDLEMSFVN 347

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           +++I + +E ++   +   SN   ++  F ++ Y DAI +YGTDKPD R  + +H+V++ 
Sbjct: 348 RENIYSLVEGMIEYSW--PSNKTNLTLPFPKMTYADAIAKYGTDKPDTRFDMKLHDVSDI 405

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
           F++S   +F   L    G                  + + + A+++ + G+ +I  +   
Sbjct: 406 FINSGLSIFDDALKSTEGTVQAIAIRPHTHITNRDLENLQKLAKTRSEHGVIFIQVKD-- 463

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL- 424
                   P++K+L       +   L M+ GD     AG  L  C      R  +A  L 
Sbjct: 464 --ETTWRSPISKYLKDDMKNRLGDLLHMKPGDVILLAAGKYLSTCLLLGHMRIAVADLLE 521

Query: 425 ----GIINCNCFEFCWIMDFPFYEWNEEEKK------IDFAHNPFTMPQGGMESLKGNDL 474
                +       F W+ DFP +   E  K       ++ AH+PFT P            
Sbjct: 522 TKGVNVRKTRSNAFVWVEDFPLFLPKENGKCESQTVELESAHHPFTAPHPEDAEFIYTKP 581

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             +++  YDLV NG EIA G IR H +++       +        +    L  A + G P
Sbjct: 582 DKVRSLHYDLVYNGAEIAGGSIRIHDAKLQKYVLDEILK---EDSSSLYHLLEALESGAP 638

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            HGGIA G DR + +L G +++R+V  FP S    DL+ G+P+ ++ E +++  + I + 
Sbjct: 639 THGGIAIGFDRYISMLRGTQSIRDVIAFPKSWEGNDLMSGAPTKLTNEDIKDYHIEIQKK 698

Query: 595 P 595
            
Sbjct: 699 K 699


>gi|170039919|ref|XP_001847765.1| aspartyl-tRNA synthetase, mitochondrial [Culex quinquefasciatus]
 gi|167863507|gb|EDS26890.1| aspartyl-tRNA synthetase, mitochondrial [Culex quinquefasciatus]
          Length = 676

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 184/603 (30%), Positives = 290/603 (48%), Gaps = 29/603 (4%)

Query: 1   MHRY--RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           ++R+  RTH+CG L  S  G  V L GW+  VR +   +F  +RD YG TQVV       
Sbjct: 78  INRFTDRTHNCGQLRASHAGQKVTLCGWLEYVRMN---MFFTLRDGYGSTQVVVPEAVTN 134

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGE 117
                 +  E +L + G V+ R     N    TG+IE+    +E+L+ A    P+ +   
Sbjct: 135 AVKLDGIPFESILKVTGTVVKRPYGQENGQQATGEIEVIMDSVEVLNPARSRLPIDIQEH 194

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEG 176
            +  E +R ++R++DLR   L  N+  R++II  MR  MI    FIE  TP L   +P G
Sbjct: 195 NQAKEFLRIEHRYIDLRSAKLQHNLRLRSQIIMKMREFMINRCGFIEVETPTLFRRTPGG 254

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A++F+VP+R     FY+L Q+PQQ+KQ+LM+   DRYFQ+A C+RDE  R DR P EF Q
Sbjct: 255 AQEFVVPTR-KPDHFYSLVQSPQQFKQMLMSGAIDRYFQVARCYRDEATRPDRQP-EFTQ 312

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+E+SF ++  I++ +E +L   +   +  + +   F R+ Y +A+ RYG DKPD R  
Sbjct: 313 LDLELSFTDRHQIMSLVEGILDASW--PNQLHPLQLPFPRMTYQEAMSRYGCDKPDTRFG 370

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           + + ++T     +E             + + A P  G    + F   + +  +   +   
Sbjct: 371 LDLRDLTTILSSNEKMRHGVATPEFGAFAIVAKPPNGN--PKTFKTALTKVLKEYPRC-- 426

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
               + +    +      +     +  T  I+ RL +  GD      G   +        
Sbjct: 427 ---KFAVSVVSDSWTESSIVNLFGVRETAEIKERLKLGTGDLMLLGYGKASEAQEMMGRV 483

Query: 417 RNHIAQELGIINCN------CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           R  +  E+   N           F WI+DFP +  NEE  +++  H+PFT          
Sbjct: 484 RLALYTEMEERNLRVTRSVLAPNFVWIVDFPMFAANEETGQLETVHHPFTTAHPEDMDKL 543

Query: 471 GN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
            +  DL SI++  +DLV NG EI  G +R H + +     +++   +    +    L  A
Sbjct: 544 RSKQDLASIRSQSFDLVWNGMEIGGGSVRIHEAALQRMVLNDILQIEH---SHLQHLLDA 600

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
              G PPHGG A G+DR + L+  AK++REV  FP + N  D L  +P  ++ E+ R   
Sbjct: 601 LDSGCPPHGGFAIGLDRYISLICRAKSIREVIAFPKTINGKDPLSKAPVRITDEEKRLYH 660

Query: 589 LRI 591
           +R 
Sbjct: 661 IRT 663



 Score = 37.4 bits (85), Expect = 7.2,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 4/73 (5%)

Query: 41  IRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQK 100
           +RD YG  Q+  +  +   E    +    V+   G + +R   T+   + TG +E+   +
Sbjct: 2   LRDSYGAIQLRVS--TIPEEQRNGISENAVILATGTIRARP--TMAQGLPTGTVEVYVDE 57

Query: 101 IEILSVAEELPLP 113
           +E+L   +    P
Sbjct: 58  LEVLDPNKPYENP 70


>gi|284931196|gb|ADC31134.1| Aspartyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 582

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 196/582 (33%), Positives = 302/582 (51%), Gaps = 19/582 (3%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
              +   V + GWV  VR  G   F+++ D   + QV    +        ++  E ++ I
Sbjct: 19  AQLLNQDVEIVGWVKNVRKLGNFNFIEVADKSALIQVFDQKNQYA-----NLSREDLVFI 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +     +  N N+  G  EL   ++ ++S ++  P  +    +  E +R KYR+LDL
Sbjct: 74  KGKLQL--KKVANPNLELGDRELLINQLTLISKSKTPPFLIEDNTDALEEVRLKYRYLDL 131

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           RR  L KN+  R+     +R  + ++ FIE  TPIL+ ++PEGARD++VPSR+    FYA
Sbjct: 132 RRPVLQKNMKLRSDFFLIVRNFLTSQGFIEIETPILSKTTPEGARDYVVPSRLGPNMFYA 191

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           LPQ+ Q YKQLLM SGF+RYFQI+ CFRDED R DR P E  Q+DME+SF+ ++     +
Sbjct: 192 LPQSAQIYKQLLMISGFERYFQISRCFRDEDLRKDRQP-EHVQIDMEVSFMSKEQFFKLV 250

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           E +   +F+   N     N F+R+ YD+A+ R+GTDKPDLR    + +V+  FV  EF V
Sbjct: 251 EAMFIHIFDRLMNVKIEPN-FMRMSYDEAMNRFGTDKPDLRFGCELVDVSAVFVDHEFSV 309

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMG 373
           F +    N    + AI       +      M ++A+     GL++  +      N    G
Sbjct: 310 FKQFALKN---RLKAIVLDEILISYKEHKVMEKYAKDNYAKGLSWFSY----DQNQIIDG 362

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
            + + ++  + + +   L  + G   F    D           R  + +   + N + ++
Sbjct: 363 SIKRFISSDDLKNLG--LLNKKGTIFFVGDDDLNVINKSLGAVRIQLNELYQLANEDEYK 420

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
           F WI+D+P YEW+++      AHN FT P+    S    D  + KA  YDLV NGFE+ S
Sbjct: 421 FLWIVDWPLYEWDDKTNSYQSAHNLFTAPEAKYLSTFNEDKANAKAASYDLVLNGFELGS 480

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G IR     +     S++G+S+  + ++FG L  A+Q G P H GI  G DR++M+L  +
Sbjct: 481 GAIRITDPSLQKAVMSSLGLSEAEMNDKFGFLLDAYQYGAPQHCGIGLGSDRLLMILTKS 540

Query: 554 KNVREVSLFPMSQNFCDLLMGSPSTVSVEQ-LRELGLRIVEN 594
           K++R+V  FP +    DL+  SPS    +Q L EL L I E 
Sbjct: 541 KSIRDVIAFPKNNQGFDLMNNSPSEAINQQFLDELYLAIKEK 582


>gi|307187769|gb|EFN72741.1| Aspartyl-tRNA synthetase, mitochondrial [Camponotus floridanus]
          Length = 649

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 211/605 (34%), Positives = 317/605 (52%), Gaps = 32/605 (5%)

Query: 1   MHRY--RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SA 57
           ++RY  RTH+CG+L + +VG  V+LSGW+   R  G   FL +RD YG TQ++   D   
Sbjct: 66  VNRYVLRTHTCGELTLQNVGEEVKLSGWMEFQR-MGK--FLILRDSYGSTQLLIPEDRKD 122

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            FE  KS+  E VL I G V+SR     N  + TG IE+  + ++IL+VA         E
Sbjct: 123 LFETVKSLSYESVLSIVGKVISRPKNQQNKGMKTGDIEVYVESLKILNVASPNLPVFIRE 182

Query: 118 -REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPE 175
             +  ES + KYR+L LR   L +N+  R+ +I  MR  +I E  F++  TP L  S+P 
Sbjct: 183 YNKAKESQQMKYRYLSLRYPELQRNLRMRSSLITKMREFLIKECNFVDIETPTLFKSTPG 242

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GA++F+VP+R   G+FY+L Q+PQQ+KQLLM  GFDRYFQ+A C+RDE  R DR P EF 
Sbjct: 243 GAQEFIVPTR-QPGNFYSLVQSPQQFKQLLMVGGFDRYFQVARCYRDESARHDRQP-EFT 300

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           QLD+EMSFV++D I+N +E++L   + E    + +   F  + Y DA+  YGTD+PDLR 
Sbjct: 301 QLDIEMSFVDRDGIMNLIEHLLMYSWPE--ELSPIKIPFKLMTYKDAMELYGTDQPDLRI 358

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA--IPAKGGGGNRAFCDRMNEWARSQGQ 353
           P  + ++T     S+  V  + + +N   +V+A   P K      +  ++ ++       
Sbjct: 359 PYRIQDLTHI---SDLSVLKRTMKLNDQQKVYALTFPNKLKYLTNSVRNKFSKIRDDYFN 415

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                I  +++ +   A +  +    +    E I     +Q+GD+     G  +      
Sbjct: 416 T-TKLIQLKIENNLWRAHLDEL---FSRNVAEDILQYCQLQEGDAVLLAIGQQIDALKIL 471

Query: 414 ADARNH----IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
              R      + ++   I  +  E  WI DFP + +   EK+++  H+PFT P       
Sbjct: 472 GKLRVEFTNILEEKGEQIRSSEAEIVWITDFPLFTF---EKQLESTHHPFTQPHSDDMEY 528

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              D L ++   YDLV NG EIA G IR H + +  Q    + I     E+    +  A 
Sbjct: 529 FITDPLKVRGLHYDLVMNGSEIAGGSIRIHDANLQRQILKMLNID----ESELSHMLEAL 584

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
             G PPHGGIA G+DR+V LL  AK++R V  FP +    DL+ G+P T+S E      +
Sbjct: 585 MYGAPPHGGIAIGLDRLVCLLCNAKSIRNVIAFPKTIEGRDLMSGAPDTISAEIKTLYHI 644

Query: 590 RIVEN 594
           +  + 
Sbjct: 645 QTADK 649


>gi|31544389|ref|NP_852967.1| aspartyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|31541233|gb|AAP56535.1| Aspartyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930432|gb|ADC30371.1| Aspartyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 582

 Score =  458 bits (1179), Expect = e-126,   Method: Composition-based stats.
 Identities = 195/581 (33%), Positives = 302/581 (51%), Gaps = 19/581 (3%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
             +   V + GWV  VR  G   F+++ D   + QV    +        ++  E ++ I 
Sbjct: 20  QLLNQDVEIVGWVKNVRKLGNFNFIEVADKSALIQVFDQKNQYA-----NLSREDLVFIK 74

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G +     +  N N+  G  EL   ++ ++S ++  P  +    +  E +R KYR+LDLR
Sbjct: 75  GKLQL--KKVANPNLELGDRELLIDQLTLISKSKTPPFLIEDNTDALEEVRLKYRYLDLR 132

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           R  L KN+  R+     +R  + ++ FIE  TPIL+ ++PEGARD++VPSR+    FYAL
Sbjct: 133 RPVLQKNMKLRSDFFLIVRNFLTSQGFIEIETPILSKTTPEGARDYVVPSRLGPNMFYAL 192

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           PQ+ Q YKQLLM SGF+RYFQI+ CFRDED R DR P E  Q+DME+SF+ ++     +E
Sbjct: 193 PQSAQIYKQLLMISGFERYFQISRCFRDEDLRKDRQP-EHVQIDMEVSFMSKEQFFKLVE 251

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
            +   +F+   N     N F+R+ YD+A+ R+GTDKPDLR    + +V   FV  EF VF
Sbjct: 252 AMFIHIFDRLMNVKIEPN-FMRMSYDEAMNRFGTDKPDLRFGCELVDVGAAFVDHEFSVF 310

Query: 315 SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374
            +    N    + AI       +      + ++A+     GL++  +      N    G 
Sbjct: 311 KQFALKN---RLKAIVLDEILISYKEHKVLEKYAKDNYAKGLSWFSY----DQNQIIDGS 363

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
           + + ++  + + +   L  + G   F    D           R+ + +   + N + ++F
Sbjct: 364 IKRFISSDDLKNLG--LLNKKGTIFFVGDDDLNVINKSLGAVRSQLNELYQLANEDEYKF 421

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            WI+D+P YEW+++      AHN FT P+    S    D  + KA  YDLV NGFE+ SG
Sbjct: 422 LWIVDWPLYEWDDKTNSYQSAHNLFTAPEAKYLSTFNEDKANAKAASYDLVLNGFELGSG 481

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            IR     +     S++G+S+  + ++FG L  A+Q G P H GI  G DR++M+L  +K
Sbjct: 482 AIRITDPSLQKAVMSSLGLSEAEMNDKFGFLLDAYQYGAPQHCGIGLGSDRLLMILTKSK 541

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQ-LRELGLRIVEN 594
           ++R+V  FP +    DL+  SPS    +Q L EL L I E 
Sbjct: 542 SIRDVIAFPKNNQGFDLMNNSPSEAINQQFLDELYLAIKEK 582


>gi|195387357|ref|XP_002052362.1| GJ17510 [Drosophila virilis]
 gi|194148819|gb|EDW64517.1| GJ17510 [Drosophila virilis]
          Length = 1132

 Score =  458 bits (1179), Expect = e-126,   Method: Composition-based stats.
 Identities = 184/602 (30%), Positives = 303/602 (50%), Gaps = 29/602 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L  +++   V + GW+   R +    F  +RD YG TQV+    +   E    
Sbjct: 412 RTHNCGELTSNEINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLILARTKGLEEYAD 468

Query: 65  --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
             V  E ++ ++G V+ R A TIN  + TG +E+ A K+++L+ A++       +     
Sbjct: 469 SGVPIESIVRVEGTVIPRPAATINPKMTTGHVEIEADKVDVLNAAKKNLPFEIRKFNRAG 528

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
           E +R  +R+LDLR + +  N+  R+ +I  MR  +I    F+E  TP L   +P GA++F
Sbjct: 529 ERLRLTHRYLDLRFNDMQHNLRLRSAVIMRMREYLINYLGFVEVETPTLFRRTPGGAQEF 588

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 589 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 646

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF  +DDI+  +E  LR  + +  +   +   F RI Y++A+ +YGTDKPD R   +++
Sbjct: 647 LSFTSRDDIMQLIEETLRYSWPK--HLPKLQTPFRRITYEEALEKYGTDKPDTRFGFLLN 704

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV++    SE               V A  A   G  R   + +++        G  ++ 
Sbjct: 705 NVSDIVEKSENFKGKYEDFGAYAIVVRASEAFWNGAARKHYESLSKV-----FSGTLFVR 759

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN-- 418
                +  +     + K L       I  + D+++ D  F   G  ++  +     R   
Sbjct: 760 KFNFANDVLDR---LTKLLGTEVATEIIEKFDLEENDLLFLCIGPKVETRNLLGRIRLDY 816

Query: 419 --HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN---D 473
              + + +     N + F W++DFP +E N    +++  H+PFT P             +
Sbjct: 817 HEFLVENVKTKKTNDYRFLWVVDFPLFERNTATNQLESVHHPFTAPLVEDLDKFATSCDN 876

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           L +I++  YDLV NG E+  G +R H  ++       V        +    L  A + G 
Sbjct: 877 LETIRSEAYDLVLNGQEVGGGSMRIHDRDMQQFILEQVLKIPH---DHLSHLLSALESGC 933

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E+++   + + +
Sbjct: 934 PPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISEEEMKLYHISVQQ 993

Query: 594 NP 595
             
Sbjct: 994 AE 995



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 4/115 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 240 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLMDTFLS 295

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              + VL I G V+ R    IN    TG++E+S   +++L+  +    P+  + +
Sbjct: 296 TPEQTVLQIVGKVLGRPKANINLKYDTGEVEVSVTNVKVLNPDDPYEGPIKVKEK 350



 Score = 60.9 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SCG+L     G FV LSG + + R +    F ++RD  G    +   +     +A+ + +
Sbjct: 96  SCGELRNHHCGMFVELSGRLFKKRVNR---FAELRDRNGGACQLVVLEDKHPRVARRMNN 152

Query: 68  E---WVLCIDGLVMSRSAETINANIITGQIELSAQKI 101
                 L I G VM R   + N  + TG+IE+  Q I
Sbjct: 153 MPENTTLTIVGQVMRRPHNSCNQTMPTGEIEVEVQDI 189


>gi|198474023|ref|XP_001356528.2| GA16436 [Drosophila pseudoobscura pseudoobscura]
 gi|198138214|gb|EAL33592.2| GA16436 [Drosophila pseudoobscura pseudoobscura]
          Length = 1106

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 184/603 (30%), Positives = 300/603 (49%), Gaps = 30/603 (4%)

Query: 5    RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
            RTH+CG+L  +++   V + GW+   R +    F  +RD YG TQV+  P +   E    
Sbjct: 421  RTHNCGELTSNEINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLLPKTKGLEEYSE 477

Query: 65   --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
              V  E ++ ++G V+ R   T+N  + TG +E+ A  + +L+ +++       +     
Sbjct: 478  TGVPIESIVRVEGTVIPRPGATVNPKMSTGHVEVEADTVLVLNPSKKNLPFEIRKFNRAG 537

Query: 122  ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
            E +R  +R+LDLR + +  N+  R+ +I  MR  ++    F+E  TP L   +P GA++F
Sbjct: 538  ERLRLTHRYLDLRFNDMQHNLRLRSSVIMKMREYLVNYLGFVEVETPTLFRRTPGGAQEF 597

Query: 181  LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 598  VVPTR-KAGHFYSLVQSPQQFKQMLMSGGVDRYFQVARCYRDEATRPDRQP-EFTQLDIE 655

Query: 241  MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            +SF  +D I+  +E  LR  + +  +   +   F RI Y++A+ +YG DKPD R   +++
Sbjct: 656  LSFTSRDGIMQLIEETLRYSWPK--HLPKLQTPFRRITYEEALEKYGNDKPDTRFGFLLN 713

Query: 301  NVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            NV+E    SE         +      V A  A   G  R   + +       G+  +  +
Sbjct: 714  NVSEIIDKSEEYKGKYEGGLAAYAIVVRASEAFWNGAARKHYEGL-------GKDFIGTL 766

Query: 360  FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN- 418
            F R            + K L       I  + D+++ D  F   G  ++  +     R  
Sbjct: 767  FVRKFGPAT-DVQDRLGKLLGEQVANEITEKFDLEENDLLFLGIGPKVETRALLGRIRLD 825

Query: 419  ---HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES---LKGN 472
                + + + +   N + F W++DFP +E N E  +++  H+PFT P             
Sbjct: 826  YHDFLVENVKMKKPNDYRFLWVIDFPLFERNRETNQLESVHHPFTQPHIDDLDNFATSCE 885

Query: 473  DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            +L +I++  YDLV NG E+  G IR H  ++       +             L  A + G
Sbjct: 886  NLENIRSQAYDLVLNGQEVGGGSIRIHDRDMQQFILEQILKIPHE---HLSHLLSALESG 942

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
             PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E ++   L ++
Sbjct: 943  CPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISEEDMKLYHLSVL 1002

Query: 593  ENP 595
            E  
Sbjct: 1003 EEE 1005



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 4/115 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 249 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLIDTFMS 304

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              + VL + G V+ R    IN    TG++E+S   ++IL+  +    P+  + +
Sbjct: 305 TPDQTVLQVVGKVLGRPKANINLKYDTGEVEVSVTSVKILNPDDPYDGPIKLKEK 359



 Score = 61.2 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SCG+L     G FV LSG + + R +    F ++RD  G    +   +     +A+ + +
Sbjct: 105 SCGELRNHHCGLFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHPRVARRMNN 161

Query: 68  E---WVLCIDGLVMSRSAETINANIITGQIELSAQKI 101
                 L I G VM R   + N  + TG+IE+  Q I
Sbjct: 162 MPENTTLTIVGQVMRRPHNSCNQTMPTGEIEVEVQDI 198


>gi|195147520|ref|XP_002014727.1| GL18794 [Drosophila persimilis]
 gi|194106680|gb|EDW28723.1| GL18794 [Drosophila persimilis]
          Length = 1091

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 184/603 (30%), Positives = 300/603 (49%), Gaps = 30/603 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L  +++   V + GW+   R +    F  +RD YG TQV+  P +   E    
Sbjct: 406 RTHNCGELTSNEINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLLPKTKGLEEYSE 462

Query: 65  --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
             V  E ++ ++G V+ R   T+N  + TG +E+ A  + +L+ +++       +     
Sbjct: 463 TGVPIESIVRVEGTVIPRPGATVNPKMSTGHVEVEADTVLVLNPSKKNLPFEIRKFNRAG 522

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
           E +R  +R+LDLR + +  N+  R+ +I  MR  ++    F+E  TP L   +P GA++F
Sbjct: 523 ERLRLTHRYLDLRFNDMQHNLRLRSSVIMKMREYLVNYLGFVEVETPTLFRRTPGGAQEF 582

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 583 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGVDRYFQVARCYRDEATRPDRQP-EFTQLDIE 640

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF  +D I+  +E  LR  + +  +   +   F RI Y++A+ +YG DKPD R   +++
Sbjct: 641 LSFTSRDGIMQLIEETLRYSWPK--HLPKLQTPFRRITYEEALEKYGNDKPDTRFGFLLN 698

Query: 301 NVTEHFVHSEFRVFSKILSVNPG-YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           NV+E    SE         +      V A  A   G  R   + +       G+  +  +
Sbjct: 699 NVSEIIDKSEEYKGKYEGGLAAYAIVVRASEAFWNGAARKHYEGL-------GKDFIGTL 751

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN- 418
           F R            + K L       I  + D+++ D  F   G  ++  +     R  
Sbjct: 752 FVRKFGPAT-DVQDRLGKLLGEQVANEITEKFDLEENDLLFLGIGPKVETRALLGRIRLD 810

Query: 419 ---HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES---LKGN 472
               + + + +   N + F W++DFP +E N E  +++  H+PFT P             
Sbjct: 811 YHDFLVENVKMKKPNDYRFLWVIDFPLFERNRETNQLESVHHPFTQPHIDDLDNFATSCE 870

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +L +I++  YDLV NG E+  G IR H  ++       +             L  A + G
Sbjct: 871 NLENIRSQAYDLVLNGQEVGGGSIRIHDRDMQQFILEQILKIPHE---HLSHLLSALESG 927

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E ++   L ++
Sbjct: 928 CPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISEEDMKLYHLSVL 987

Query: 593 ENP 595
           E  
Sbjct: 988 EEE 990



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 4/115 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 234 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLIDTFMS 289

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              + VL + G V+ R    IN    TG++E+S   ++IL+  +    P+  + +
Sbjct: 290 TPDQTVLQVVGKVLGRPKANINLKYDTGEVEVSVTSVKILNPDDPYDGPIKLKEK 344



 Score = 60.9 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SCG+L     G FV LSG + + R +    F ++RD  G    +   +     +A+ + +
Sbjct: 90  SCGELRNHHCGLFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHPRVARRMNN 146

Query: 68  E---WVLCIDGLVMSRSAETINANIITGQIELSAQKI 101
                 L I G VM R   + N  + TG+IE+  Q I
Sbjct: 147 MPENTTLTIVGQVMRRPHNSCNQTMPTGEIEVEVQDI 183


>gi|304372946|ref|YP_003856155.1| aspartyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|304309137|gb|ADM21617.1| aspartyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|330723454|gb|AEC45824.1| aspartyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 573

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 206/582 (35%), Positives = 318/582 (54%), Gaps = 21/582 (3%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-PDSACFEIAKSVRSEWVLC 72
              V   V + GW++ +R      F++IRD+YGI QV+ +  +     I  S+  E V+ 
Sbjct: 12  SKLVNHKVAIKGWINNIRKFKDKTFVEIRDYYGILQVIIDLTNDHLKTIFSSLTKESVVE 71

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G++  R  + IN NI  G +E+  Q I++ S+A ELP P+  + +  E +R +YRFLD
Sbjct: 72  IQGILRKR--KDINPNIKNGDLEIITQDIKVFSIASELPFPIQDQIDANEDLRLEYRFLD 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LRR  L  NI+ R ++   +R     +NFIE  TPIL+ S+PEGAR FLVPSR  +  F+
Sbjct: 130 LRRKPLRNNIIFRNKLFYYIRSFFFEKNFIEIETPILSKSTPEGARSFLVPSR-RKNHFF 188

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           +LPQ+PQ YKQLLM SGF++YFQIA  FRDED R DR   EF QLD+E++F   + I   
Sbjct: 189 SLPQSPQLYKQLLMVSGFEKYFQIARVFRDEDLRKDRQ-YEFVQLDVELAFPTIESIRKA 247

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +E ++  +F +      +S  F  + YD AI ++G+DKPDLR    +    +     +  
Sbjct: 248 VEELIVYLFNKLK--IEISTPFAILEYDQAIDKFGSDKPDLRFDNFLLAANDLNNAQD-S 304

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
           +F K  +     E   I       ++      +E         L Y+  +      +   
Sbjct: 305 LFEKNTTKTLFLEDILI-------DKKEYKIFSEKVVQNKANRLLYVHIQ---DWQIVHY 354

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
               K  +    +    + + + G + F +  +  K C      R  +AQ   +I  + +
Sbjct: 355 SF--KLNSFEAIKTYVKKHNFKTG-TLFIVNDEYEKVCQGLGALRVAVAQHYNLIKQDQY 411

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F W++++P +E +EE +K+  AH+PFTMP      L   D L ++A  YDLV NG E+A
Sbjct: 412 KFLWVVNWPMFELDEETQKLSAAHHPFTMPTFETLDLLKTDPLKVRAQAYDLVLNGVEVA 471

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G IR    ++  Q F  +G+SKE   N+FG L +AF  G+PPHGGIA G+DR++M+L  
Sbjct: 472 GGSIRISSKQIQEQIFDTIGLSKEQANNQFGFLLKAFSYGVPPHGGIAFGLDRLLMILTN 531

Query: 553 AKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           ++++R+V  FP++    DLL+ SP+    +QLRE  +++VE 
Sbjct: 532 SESIRDVIAFPVNSKGQDLLLKSPTLTEDQQLREYNIKLVEE 573


>gi|298346860|ref|YP_003719547.1| aspartate--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|298236921|gb|ADI68053.1| aspartate--tRNA ligase [Mobiluncus curtisii ATCC 43063]
          Length = 448

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 170/448 (37%), Positives = 252/448 (56%), Gaps = 23/448 (5%)

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           M    F+E  TP LT S+PEGARDF+VP+R+  GS+YALPQ+PQ +KQLLM  G +RYFQ
Sbjct: 1   MEEHEFLEIETPTLTRSTPEGARDFVVPARIRPGSWYALPQSPQLFKQLLMVGGMERYFQ 60

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +A C+RDED R+DR P EF QLDMEMSFV+QDD++   E++L+ +++       ++    
Sbjct: 61  LARCYRDEDSRADRQP-EFTQLDMEMSFVDQDDVIEVTEHLLKEIWKVIG--YDLTTPIP 117

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
           R+ + +A+ R+G+DKPDLR    + ++T+ F  + F++F         Y    +   GG 
Sbjct: 118 RMPFQEAMDRFGSDKPDLRFGYELVDLTDFFKDTPFKIFQAP------YVGAVVMPGGGS 171

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             R   D+  EWA+++G  GLAY+    DE G     GPVAK+++      +      Q 
Sbjct: 172 QPRRTFDKWQEWAKARGAKGLAYVTL--DEKGEAG--GPVAKNISDAEKVGLAAATGAQP 227

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWN---EEEKK- 451
           GD  FF AGD     +    AR  I +   +I+   + F W++D P ++ +   E E   
Sbjct: 228 GDCIFFAAGDKTASQTLLGAARLEIGKRCDLIDEKAWAFTWVVDAPLFKPSGEAEAEGDV 287

Query: 452 ------IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML 505
                     H+ FT P+         D  S  A+ YD+VCNG E+  G IR H  ++  
Sbjct: 288 ALGHSAWTAVHHAFTSPKPECLDTFDTDPGSALAYAYDIVCNGVELGGGSIRIHRRDIQE 347

Query: 506 QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           + F  +G S+E  + RFG L  AF+ G PPHGG+A G DRI  +L G+ ++R+V  FP +
Sbjct: 348 RVFKVMGFSQEEAQARFGFLLDAFKYGAPPHGGLALGWDRIAGMLTGSPSIRDVIAFPKA 407

Query: 566 QNFCDLLMGSPSTVSVEQLRELGLRIVE 593
            +  D L G+P+ ++ EQ +E G+  V 
Sbjct: 408 GDGLDPLTGAPAPITDEQRKETGVDYVP 435


>gi|322783669|gb|EFZ11007.1| hypothetical protein SINV_08262 [Solenopsis invicta]
          Length = 616

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 195/603 (32%), Positives = 304/603 (50%), Gaps = 26/603 (4%)

Query: 1   MHRY--RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SA 57
           ++RY  RTH+CG+L + ++G  VRLSGW+   R      F+ +RD YG TQ++   D   
Sbjct: 31  VNRYVLRTHTCGELTLKNIGEEVRLSGWMEFQRMRK---FIILRDAYGSTQLLIPEDRKD 87

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-G 116
             EI +++  E VL + G V+ R  +  N  + TG IE+  + +E+L+VA + P      
Sbjct: 88  LVEIVQNLSYESVLSVVGKVVPRPEDQQNRRMKTGDIEVYVESLEVLNVASQNPPIFIRD 147

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPE 175
             +  ES + K+R+L LR   + +N+  R+ +I  MR  +I E  F++  TP L  S+P 
Sbjct: 148 YNKAKESQQMKFRYLSLRYPEMQRNLRLRSSLIMKMREFLINECSFVDVETPTLFKSTPG 207

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GA++F+VP+R  +G+FY+L Q+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF 
Sbjct: 208 GAQEFVVPTR-QRGNFYSLVQSPQQFKQLLMVGGLDRYFQVARCYRDESARHDRQP-EFT 265

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           QLD+EMSFV++D +++ +EN+L   + E     ++   F  + Y+D ++ YGTD+PDLR 
Sbjct: 266 QLDIEMSFVDRDGVMSLIENLLMYSWPE----ESIKVPFKLMMYEDVMKTYGTDQPDLRI 321

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
           P  + ++T  F         K             P +     ++  D +++         
Sbjct: 322 PYQIQDLTHMFDLPVLMEAVKHEDKQQKVYALVFPNQSKYLTKSIRDGLSKIRSDYFS-A 380

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
              I  +++       +  + K  +    E +     +Q+GD+     G  +        
Sbjct: 381 TKLIQLKIENDSWRTQLDKL-KPKSGAIAEDLSQYCKLQEGDAVLLAIGRRMDALKLLGK 439

Query: 416 ARNHIAQELG----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            R      L      I  +  EF WI DFP + +  E   ++  H+PFT P         
Sbjct: 440 LRVEFTNTLEAKGEQIRSSENEFLWITDFPLFTF--EGTTLESTHHPFTQPHPDDMEYLT 497

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D L ++   YDLV NG EIA G IR H + +  Q    + I     E +   +  A   
Sbjct: 498 TDPLKVRGLHYDLVMNGSEIAGGSIRIHDANLQRQILRMLNID----ETKLSHMLEALTY 553

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR+V LL   K++R V  FP +    DL+ G+P  +S +      ++ 
Sbjct: 554 GAPPHGGIAIGLDRLVCLLCNEKSIRNVIAFPKTIEGRDLMSGAPDVISDDLKTLYHIQT 613

Query: 592 VEN 594
           V  
Sbjct: 614 VNK 616


>gi|157115821|ref|XP_001658298.1| aspartyl-tRNA synthetase [Aedes aegypti]
 gi|108883468|gb|EAT47693.1| aspartyl-tRNA synthetase [Aedes aegypti]
          Length = 600

 Score =  454 bits (1169), Expect = e-125,   Method: Composition-based stats.
 Identities = 180/599 (30%), Positives = 287/599 (47%), Gaps = 26/599 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L  S V   + + GW+   R +    F  +RD YG TQ+    + A      +
Sbjct: 16  RTHNCGELRTSHVDQEIVICGWLEFSRLNK---FFTLRDGYGSTQIFIPDELAAEVNLNN 72

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPES 123
           +  E +L ++G V+ R     N  + TG++E+    +E+L+ A    P+ +    +  E+
Sbjct: 73  IPFESILRVEGKVVKRPKGQENPRLPTGEVEVVLGNVEVLNKARNRLPIDIKEHNKAKEN 132

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
           +R ++R++DLR   L +++  R++II  MR  MI +  F+E  TP L   +P GA++F+V
Sbjct: 133 LRLEFRYIDLRSTQLQRSLRLRSQIIMKMREYMINQCGFVEVETPTLFRRTPGGAQEFVV 192

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R   G FY+L Q+PQQ+KQ+LM+   DRYFQIA C+RDE  R DR P EF QLD+E+S
Sbjct: 193 PTR-KPGHFYSLVQSPQQFKQMLMSGAIDRYFQIARCYRDEATRPDRQP-EFTQLDIELS 250

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F ++D I+  +E VL   +    NG  +   F RI Y +A+ R+G DKPD R    + +V
Sbjct: 251 FTDRDKIMTLLEGVLASSW--PVNGEPLKVPFQRITYAEAMNRFGIDKPDTRFEYELQDV 308

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
             H   +          +   Y + A          +    +   ++        ++   
Sbjct: 309 GGHIKLNPNLTRGLDEQIFGAYAIVARNPHSAAPT-SLKKTLETVSKEH--KNCRFVLSA 365

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           + ++        +   L       ++  L +Q GD      G  L+  +     R     
Sbjct: 366 VTDNW---LKSSIVNLLGDEVARKLQNHLTLQPGDLLLLGFGSRLETQNLMGRIRLAFYD 422

Query: 423 ELG------IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK--GNDL 474
            L       + +    +F W+ DFP +  NEE   ++  H+PFT P            DL
Sbjct: 423 SLESRNLVPLRSSTDQKFLWVYDFPMFAPNEETGHLESVHHPFTAPHPEDFPKLHEKTDL 482

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             I++  +DLV NG EI  G +R H   +       V   +         L  A +CG P
Sbjct: 483 QVIRSQSFDLVWNGVEIGGGSVRIHDGALQKMVLDEVLQIEH---AHLQHLLDALECGCP 539

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PHGG A G+DR + LL  A ++R+V  FP S +  D L  +P  +S E+ +   +R V+
Sbjct: 540 PHGGFAVGLDRYIALLCSAPSIRDVIAFPKSSDGKDPLSKAPVPISEEEKKLYHIRTVD 598


>gi|195436782|ref|XP_002066334.1| GK18240 [Drosophila willistoni]
 gi|194162419|gb|EDW77320.1| GK18240 [Drosophila willistoni]
          Length = 1078

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 188/596 (31%), Positives = 302/596 (50%), Gaps = 29/596 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L  +++   V + GW+   R +    F  +RD YG TQV+  P +   E    
Sbjct: 411 RTHNCGELTSNEINDKVVICGWLEFQRMNK---FFILRDAYGQTQVLLLPKTKGLEEYVD 467

Query: 65  --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
             V  E ++ ++G V+ R A TIN  + TG +E+ A  + +L+ A++       +     
Sbjct: 468 TGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADNVTVLNPAKKNLPFEIRKFNRAG 527

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
           E +R  +R+LDLR + +  N+  R+ +I  MR  +I    F+E  TP L   +P GA++F
Sbjct: 528 ERLRLTHRYLDLRFNDMQHNLRLRSSVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 587

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 588 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGMDRYFQVARCYRDEATRPDRQP-EFTQLDIE 645

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF  +DDI+  +E  LR  + +  + + +   F RI Y++A+ +YG DKPD R  ++++
Sbjct: 646 LSFTSRDDIMQLIEETLRYSWPK--HLSKLQTPFRRITYEEALEKYGCDKPDTRFGLLLN 703

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NVT+    S+               V A  A   G  R   + + +        G  ++ 
Sbjct: 704 NVTDIIEKSDEFKEKYDDFGAYAIVVRASEAFWNGAARKHYEGLGK-----DFKGTLFVR 758

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN-- 418
            +   S +V     + K L     + +  + D+++ D  F   G   +  S     R   
Sbjct: 759 -KFMYSKDVEER--LTKLLGEQVAKEVTEKFDLEENDLLFLGIGPKEETRSLLGRIRLDY 815

Query: 419 --HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN---D 473
              + +       + + F W++DFP +E N +  +++  H+PFT P         N   +
Sbjct: 816 HEFLVENGKAKKPHEYRFLWVIDFPLFERNSQTNQLESVHHPFTAPHPEDLDNFANQCDN 875

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           L SI++  YDLV NG E+  G IR H  ++       V             L  A + G 
Sbjct: 876 LESIRSQAYDLVLNGQEVGGGSIRLHDRDMQHFILDQVLKIPHE---HLSHLLSALESGC 932

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           PPHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E+++   L
Sbjct: 933 PPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPIAISDEEMKLYHL 988



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 4/115 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 241 RDLTCNDLRRDDVGKSVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLMDTFLS 296

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              + VL I G V+ R    IN    TG++E+S   ++IL+  +    P+  + +
Sbjct: 297 TPDQTVLQIVGKVLGRPKANINLKYDTGEVEVSVTSVKILNPDDPYEGPIKAKEK 351



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SCG+L     G FV LSG + + R +    F ++RD  G    +   +     +A+ + +
Sbjct: 97  SCGELRNHHCGLFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHPRVARRMNN 153

Query: 68  E---WVLCIDGLVMSRSAETINANIITGQIELSAQKI 101
                 L I G VM R   + N  + TG+IE+  Q I
Sbjct: 154 MPENTTLTIVGQVMRRPHNSCNQTMPTGEIEVEVQDI 190


>gi|227503533|ref|ZP_03933582.1| aspartyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227075569|gb|EEI13532.1| aspartyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 454

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 176/452 (38%), Positives = 246/452 (54%), Gaps = 23/452 (5%)

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +   +F E  TP LT S+PEGARDFLVP+R+  GS+YALPQ+PQ +KQLLM +G +RY+Q
Sbjct: 2   LDKHDFAEIETPTLTRSTPEGARDFLVPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQ 61

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           IA C+RDED R+DR P EF QLD+EMSFV+QDD++   E +++ +++       +     
Sbjct: 62  IARCYRDEDFRADRQP-EFTQLDVEMSFVDQDDVIALGEEIVKELWKLIG--YDIQTPIP 118

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
           R+ Y DA++ YG+DKPDLR  I +   TE F  + FRVF         Y    +   G  
Sbjct: 119 RMTYADAMKYYGSDKPDLRFDIKIVECTEFFKDTTFRVFQN------EYVGAVVMDGGAS 172

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             R   D   +WA+ +G  GLAYI   + E G +   GPVAK++     E I   +  + 
Sbjct: 173 QPRRQFDAWQDWAKQRGAKGLAYIT--VAEDGTLG--GPVAKNITDAEREGIAEHVGAKP 228

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK----- 450
           GD+ FF AGD     +    AR  IA++L +I    + F W++D P +E + +       
Sbjct: 229 GDAIFFAAGDTKSSRALLGAARGEIAKKLDLIKEGDWAFTWVVDAPLFEPSADATASGDV 288

Query: 451 -----KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML 505
                K    H+ FT P+         +     A+ YD+VCNG EI  G IR H  +V  
Sbjct: 289 ALGHSKWTAVHHAFTSPKPEWIDSFDENPGEATAYAYDIVCNGNEIGGGSIRIHQEDVQK 348

Query: 506 QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           + F  +GI  E  + +FG L  AF  G PPHGGIA G DRIV LL G  ++R+V  FP S
Sbjct: 349 RVFEVMGIGDEEAQEKFGFLLDAFSYGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFPKS 408

Query: 566 QNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
               D L  +P+ +   Q +E G+      K+
Sbjct: 409 GGGVDPLTDAPAPIPAAQRKETGVDFKPEKKR 440


>gi|269114962|ref|YP_003302725.1| Aspartyl-tRNA synthetase (Aspartate-tRNAligase) [Mycoplasma
           hominis]
 gi|268322587|emb|CAX37322.1| Aspartyl-tRNA synthetase (Aspartate-tRNAligase) [Mycoplasma hominis
           ATCC 23114]
          Length = 564

 Score =  451 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 189/601 (31%), Positives = 303/601 (50%), Gaps = 42/601 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M     + CG L ++D+   V L GW+   R     +F+D+RD  G+ Q++    S    
Sbjct: 1   MKTMNKNYCGTLCINDLNKEVELCGWIANKRKFKQQVFIDLRDSSGVVQLIFQNVSDPL- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-- 118
               +  E  + + G V  R    +N  + TG+IE+     +I + A+++P  +   +  
Sbjct: 60  ----LTKESCIYVKGTVQKRLE--VNPALKTGEIEVIVSDYKIFNSAKQIPFEINNSKST 113

Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +  E IR +YRFLDLR + +  N+  R + +  +R     + +IE  TPIL  S+PEGA
Sbjct: 114 NDANEDIRLEYRFLDLREERMLNNLRLRHKFLLLVRNFFDKQGYIEVETPILGKSTPEGA 173

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           RD+LVP+R  +G F+ALPQ+PQ +KQLLMA+GF++YFQIA  FRDED R DR P EF QL
Sbjct: 174 RDYLVPTR-RKGRFFALPQSPQLFKQLLMAAGFEKYFQIARVFRDEDLRKDRQP-EFTQL 231

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSF  Q++I    E++ + V  +      +   F ++ +  ++  YG DKPD R   
Sbjct: 232 DIEMSFGSQEEIFKLCEDMWKDVLSQLG--YKIETPFPKMDFFYSMAHYGNDKPDTRFGF 289

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           ++ + ++ F     + F K +  +                      +NE  +      L 
Sbjct: 290 LIEDYSKQFAAKYNKKFVKAIVFDRNINE-------------HKQIINETFKKNNGQILD 336

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
               +         +   AK  NI    AI    D++                      R
Sbjct: 337 IFDLKEANQNEFQCLLDKAKEDNISTPWAIISANDLE------------EDALKSLGAIR 384

Query: 418 NHIAQEL-GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN-DLL 475
             IA +L  + + N   F W++++P +E++ E K    AH+ FT  +          +L 
Sbjct: 385 T-IANDLYKLADPNQLNFLWLVNWPMFEYDRETKTYSPAHHAFTQFEESTMKYLETGELE 443

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            ++A  YDLV NGFE+ SG IR +  ++  + F  + +S++  ++RFG   +AF+ G+PP
Sbjct: 444 KVRAKSYDLVLNGFELGSGSIRIYDPKIQKKMFDVINLSEKQQQDRFGFFLKAFEYGLPP 503

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           H GIA G++RI+M+L  ++++R+V  FP +    DLL  +PS V+ EQL E GL +  N 
Sbjct: 504 HNGIAFGVERILMILTKSESIRDVIAFPKNAKGIDLLTSAPSDVTKEQLDEYGLELKINK 563

Query: 596 K 596
           K
Sbjct: 564 K 564


>gi|242007519|ref|XP_002424587.1| aspartyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212508030|gb|EEB11849.1| aspartyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 582

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 196/594 (32%), Positives = 298/594 (50%), Gaps = 22/594 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-IAK 63
           RTH+CG+L    VG  V L GWV   R  G   F+ +RD YG TQ+      + F+ + +
Sbjct: 2   RTHTCGELDDIHVGQNVCLMGWVEFQR-MGK--FVLLRDGYGKTQLTIPESKSNFQSLVE 58

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +++ E VL  +G V  R A   N    TG+IE+    +++L++A+ LP  V    +  ES
Sbjct: 59  TLKPESVLLAEGTVFPRPAGQENLKQKTGKIEVIVSDLKVLNMAKNLPFSVRDFNKPNES 118

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFLV 182
           IR KYR+LDLR   +  N+  R++II +MR  +I   +F+E  TP L   +P GA++F+V
Sbjct: 119 IRMKYRYLDLRYPNMQHNLRLRSKIIYNMRKYLIEHLDFVEVETPTLFKRTPGGAQEFIV 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+   +G FY+L Q+PQQ+KQLLM    DRYFQIA C+RDE  R+DR P EF QLD+EMS
Sbjct: 179 PT-EKKGKFYSLVQSPQQFKQLLMIGSIDRYFQIARCYRDEPMRNDRQP-EFTQLDIEMS 236

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F +++DI N +E +L+  + E      +   F R+ Y++A+  YGTDKPDLR    + ++
Sbjct: 237 FCDREDIFNLIEELLKNCWPESLGK--LKTPFPRLSYEEAMNSYGTDKPDLRFDWKLKDL 294

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T  F ++      +        +         G N A  ++  E         L +I   
Sbjct: 295 TSLFSNNINNCVGQFKLKKFWDKKDFAVYGFVGRNGAVSEKTAELICYTYSCELYFISHV 354

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                  +    +    N +    I+   + + GD  F   G            R + A 
Sbjct: 355 KSLK---SMQDTLQALFNPIIAAEIKKITEYEKGDVLFLAFGSKKNVVESLGKTRVNFAD 411

Query: 423 ELG-----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            L      + + N + F WI+DFP +E  ++  KI  AH+PFT P      L   + L +
Sbjct: 412 YLEENGISVFDKNSYCFSWIVDFPLFEIVDD--KIQSAHHPFTQPHSKDFDLLEKNPLKV 469

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K+  +DLV NG EI  G IR     +       +        +    L      G PPHG
Sbjct: 470 KSLHFDLVLNGNEIGGGSIRITDGNLQKIILEKILNMNAESVS---HLIEGLNSGAPPHG 526

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GIA G+DR++ ++  A ++REV  FP ++   D L G+P  +S ++ +   L+I
Sbjct: 527 GIALGLDRLMTIICKANSIREVIAFPKNRLGQDPLSGAPCDISEDEKKRYHLQI 580


>gi|156550606|ref|XP_001604266.1| PREDICTED: similar to SD02215p [Nasonia vitripennis]
          Length = 634

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 184/595 (30%), Positives = 304/595 (51%), Gaps = 30/595 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RTH+CG+L + +    V L GW+   R  G   FL +RD YG TQ + + D     ++  
Sbjct: 52  RTHTCGELTIFNSNENVTLCGWLEHER-LGK--FLILRDSYGSTQCIIDDDKADLRKLLL 108

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-REYPE 122
            +  E VL ++G V+ R     N  + TG+IE+  + +EIL+ A++          +  E
Sbjct: 109 DLPLETVLTVNGTVVPRPEGQCNPKLKTGEIEVQVESLEILNTAKQPLPFSIRHFNKAKE 168

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFL 181
           S++ +YR+L LR   L +N+  R+ +   MR  +I +  F++ +TP L   +P GA++F+
Sbjct: 169 SLQMQYRYLALRFPELQRNLRLRSWVTMKMREYLINQCEFVDVATPTLFRKTPGGAQEFV 228

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP++ + G FY+L Q+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF QLD+EM
Sbjct: 229 VPTK-HLGKFYSLVQSPQQFKQLLMVGGIDRYFQMAQCYRDEGSRQDRQP-EFTQLDIEM 286

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV+++DI++  EN++   + E  +       F R+ Y++++  YGTD PDLR P  +H+
Sbjct: 287 SFVDREDIMDLTENLIANSWPE--SVEKHYPPFPRLTYEESMETYGTDSPDLRIPGRIHS 344

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG-LAYIF 360
           +T+   ++          ++          +     ++  +++   A        L    
Sbjct: 345 ITDIAHNAGDGF-----DLSCELYAAVFSGQQEFLTKSAKEQLIRLAEQAFPKAKLVKHK 399

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH- 419
            +  E   ++ +      L+ +  + I  +  +Q+ D      G            R   
Sbjct: 400 VKDLELNGLSYL------LSGLTRQNIVNQFKLQEKDVILMAYGPKQDARQLLGKIRVEF 453

Query: 420 --IAQELGI-INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             I +  G+ I  + ++F WI+DFP +E +E+ K +   H+PFTMP            L 
Sbjct: 454 TDIMESKGLTIRESGYKFAWIIDFPLFEIDEDTKCLKTTHHPFTMPHPEDMQNLLTAPLK 513

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++  QYDL  NG EI  G IR H   +  Q F  + I    +      +  A  CG PPH
Sbjct: 514 VRGLQYDLTLNGSEIGGGSIRIHQKALQEQIFKMLNIDPSTM----YYMLEALDCGAPPH 569

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           GGIA G+DR + ++ GA ++R+V  FP +    DL+ G+P+ +S E  +   +++
Sbjct: 570 GGIALGLDRYMSVICGAPSIRDVIAFPKTMEGRDLMSGAPARISEEDKKLYHIQV 624


>gi|23012229|ref|ZP_00052366.1| COG0173: Aspartyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 497

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 255/504 (50%), Positives = 326/504 (64%), Gaps = 17/504 (3%)

Query: 103 ILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFI 162
           +L  A ELPLPVFG+R    +   KYRF  + R+ LH     R  I +    R + E  +
Sbjct: 1   MLGPAGELPLPVFGDRNIRRN-AVKYRF-SISREKLHATYEARAIIDSL---RAMREAVL 55

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
                     SPEGARD+LVPSRV+ G FYALPQAPQQ+KQL M +GFDRYFQIAPCFRD
Sbjct: 56  RVPDADPDRVSPEGARDYLVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRD 115

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           ED R+DR PGEFYQLD+EMSFV Q+D+   +E VLRGVFEEF+ G  V+  F RI Y DA
Sbjct: 116 EDARADRSPGEFYQLDIEMSFVTQEDVFQAVEPVLRGVFEEFAEGKRVTPVFPRITYADA 175

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVH--SEFRVFSKILSVNPGYEVWAIPAKGGGGN-RA 339
           + +YG DKPDLRNP+I+ +VT+ F     EF+ F  ++         AIPA G  G  R+
Sbjct: 176 MLKYGVDKPDLRNPLIIADVTDEFADDAVEFKAFKGVIKAGGVVR--AIPATGAAGQPRS 233

Query: 340 FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC 399
           F D++NEWARS+G PGL YI +  +E G + G GP+AK +       I  +   + GD+ 
Sbjct: 234 FFDKLNEWARSEGAPGLGYIVF-EEEGGQLTGKGPIAKFIPAAIQARIAEKAGAKAGDAV 292

Query: 400 FFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF 459
           F  AG   K  + A  AR  I  EL + + + F FCW++DFP YEWNEEEK+IDF+HNPF
Sbjct: 293 FLSAGPEAKAAALAGKARIRIGDELKLSDTDQFAFCWVVDFPMYEWNEEEKRIDFSHNPF 352

Query: 460 TMP---QGGMESLKGNDLLSI---KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
           +MP   +    +L   D   I   KAFQYD+VCNG E++SG IRNH  +VM +AFS  G 
Sbjct: 353 SMPNFDRDEFLALGEGDAEKILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFSIAGY 412

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLM 573
            K+V+E +FGG+  A + G PPHGGIA G+DRIVMLL    N+REV LFPM+Q   DL+M
Sbjct: 413 GKDVLEEKFGGMLNALRLGAPPHGGIAPGVDRIVMLLCHEPNIREVVLFPMNQRAEDLMM 472

Query: 574 GSPSTVSVEQLRELGLRIVENPKK 597
           G+P+  + +QLREL +R+    KK
Sbjct: 473 GAPAEATPKQLRELHIRLNLPEKK 496


>gi|114565514|ref|XP_001149965.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 2
           [Pan troglodytes]
          Length = 590

 Score =  448 bits (1152), Expect = e-123,   Method: Composition-based stats.
 Identities = 177/549 (32%), Positives = 278/549 (50%), Gaps = 25/549 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 226

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 227 LVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 284

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  + + 
Sbjct: 285 MSFVDQTGIQSLIEGLLQYSW--PNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMKII 342

Query: 301 NVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F ++E       LS      +   IP       R   + + ++A       +  +
Sbjct: 343 DISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQEILPV 402

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F   + + N     PVA  +       +   ++ Q+ D     AG+  K CS     R  
Sbjct: 403 FLNANRNWN----SPVANFIMESQRLELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLE 458

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE  + ++ AH+PFT P      L   +
Sbjct: 459 CADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTE 518

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
               ++  YDLV NG EI  G IR H +E+     + +      +      L +A   G 
Sbjct: 519 PKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLKEDVKM---LSHLLQALDYGA 575

Query: 534 PPHGGIAAG 542
           PPHGGIA G
Sbjct: 576 PPHGGIALG 584


>gi|302833734|ref|XP_002948430.1| hypothetical protein VOLCADRAFT_58252 [Volvox carteri f.
           nagariensis]
 gi|300266117|gb|EFJ50305.1| hypothetical protein VOLCADRAFT_58252 [Volvox carteri f.
           nagariensis]
          Length = 601

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 192/605 (31%), Positives = 300/605 (49%), Gaps = 36/605 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           R+H CG + V+D+GS + + GWV R R  GG+ F D+RDH G+ QV+  P S   E+   
Sbjct: 10  RSHGCGAVTVNDIGSRITVCGWVDRNRDMGGVQFFDVRDHSGLLQVMCEPQSVPPEVSRT 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGER 118
           A  +R+E+V+C+ G++ +R  +  N  I TGQ+EL A+ ++IL+V       P+    E+
Sbjct: 70  ASRLRNEYVVCVRGVLRAR--KDPNPRIPTGQLELLAESVDILNVVTRPLPFPISEAEEQ 127

Query: 119 EYP-ESIRFKYRFLDLRRDTLHKNIVKRT----RIINSMRCRMIAENFIECSTPIL-TAS 172
           E P E  R K R LDLR +        R     R +      +     +   T  +    
Sbjct: 128 EPPREDTRLKNRVLDLRWE--GGESWLRAGGEGRGVLLPLPPLTLNLPLSVRTAAVYNNP 185

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
            P     F   SRV  G +YALPQ+PQ +KQ+LM +G DRY+QIA CFRDED R+DR P 
Sbjct: 186 LPLPPLHFPPLSRVQPGEWYALPQSPQLFKQMLMVAGMDRYYQIARCFRDEDLRADRQP- 244

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF QLD+E++F++   +   ME ++  +F++      ++  F R+ Y +A+ +YG+DKPD
Sbjct: 245 EFTQLDLEVAFMDDVALQGLMEQLVAQIFKQLLGV-ALTTPFRRMSYAEAMDKYGSDKPD 303

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC---DRMNEWAR 349
           LR  +   N++E      F+VFS  ++     +   +P      N       D  NE A 
Sbjct: 304 LRYGLEFVNLSEVVRECGFKVFSGAVADGGVVKAIRVPDGKRISNTRIKPRGDIANE-AV 362

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
           + G  GLA I  R+   G++     + + L+    E +        GD     AG     
Sbjct: 363 AAGSAGLASI--RVSADGSLDAAKAIKEGLSGQQAEQLLRETGAGPGDLLLLAAGPTDVV 420

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
                  R  + +ELG+I        W++DFP +E+N EEK+      P      G+   
Sbjct: 421 NRALDRVRQLLGKELGLIKPGDHSLLWVVDFPMFEYNPEEKRYQVGGGPGGGGVPGVRGG 480

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
               +         L            R +  ++  + F  +G++    +++FG L   F
Sbjct: 481 GVPGVRGGGIGGGSL------------RIYRRDIQQKVFELIGLNPAEAQSKFGYLLDCF 528

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGG+A G+DR+ MLL GA ++R+V  FP +      L G+P+ V+ +QL EL +
Sbjct: 529 EYGAPPHGGLAFGLDRLAMLLAGAPSIRDVIAFPKTAQAQCALTGAPAPVADKQLHELHV 588

Query: 590 RIVEN 594
            +V +
Sbjct: 589 AVVSS 593


>gi|290985078|ref|XP_002675253.1| tentative aspartyl-tRNA synthetase [Naegleria gruberi]
 gi|284088848|gb|EFC42509.1| tentative aspartyl-tRNA synthetase [Naegleria gruberi]
          Length = 687

 Score =  447 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 203/620 (32%), Positives = 310/620 (50%), Gaps = 44/620 (7%)

Query: 5   RTHSCGDL-GVSDVGSFVRLSGWVHRVR--PHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           R   CG++ G   VG  V+L+GWV  +R       +F+ +RD  G+ QV+         +
Sbjct: 76  RNQYCGEVVGDELVGKQVKLNGWVENIRIINQNECVFVTVRDVSGVVQVMLKKKELIEYL 135

Query: 62  -AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +++E V+ + G+V  R +E +N N+ TG  E+ A ++ +L+ A+ LPL +      
Sbjct: 136 KDNEIKNESVVFVSGVVSKRPSEMMNPNMKTGAYEIEATELLLLNKAKTLPLQL---VNA 192

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGARD 179
            E IR KYR+LDLRR  L +N+  R++ +   R        F+E  TP L  S+PEGAR+
Sbjct: 193 EEEIRLKYRYLDLRRRQLVENLSIRSKALAITRKYFGEMNRFLEIETPTLFKSTPEGARE 252

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP+R  +G FYAL Q+PQQYKQLLM  G DRYFQIA C+RDE  R DR P EF Q+D+
Sbjct: 253 FLVPTR-QKGKFYALTQSPQQYKQLLMVGGMDRYFQIARCYRDESGRMDRQP-EFTQIDL 310

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN-PII 298
           EMSF+ Q DI   +EN ++ ++++    +     F ++ Y DA+  YG+DKPDLR   + 
Sbjct: 311 EMSFLTQKDIYALIENFIKMLWKDILGIDI-KTPFQQMKYRDAMDMYGSDKPDLRYEDLK 369

Query: 299 MHNVTEHFVH--SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             NVTE F +  S+  + ++ ++             G    R   D+  E A+S  +  L
Sbjct: 370 FKNVTEIFKNEKSQIEIVNQTVADAGFVYALKAKQIGATMTRKIIDQFTEKAKSVEKTRL 429

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAAD 415
                   + G         K L       +R +LD+++GD                   
Sbjct: 430 ----IISTKIGKPEEPFLNGK-LTEQQQAKLREQLDLKEGDMLILSVDKEWETTVKGLGR 484

Query: 416 ARNHIAQ---ELGIIN----CNCFEFCWIMDFPFYEWNEEE---------KKIDFAHNPF 459
            R   A+   E GI         + F W++DF  +E  +++         + +   H+PF
Sbjct: 485 VREQCAKYMTEQGIYQFNTIEEKYRFLWVIDFQLFERAKDQHGQAHLHTSRGLSAMHHPF 544

Query: 460 TMPQGGMESLKG----NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-GIS 514
           T P      L      ND+L ++   YD V NG E+  G IR H +++       V  + 
Sbjct: 545 TAPHAEDIPLLYSDDVNDILKVRGQHYDCVLNGVELGGGSIRIHQADMQKYVLEKVLELG 604

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK---NVREVSLFPMSQNFCDL 571
           +E    RFG L  A   G PPHGG+A G DR++ LL G      +R+V  FP S +  ++
Sbjct: 605 EERTMVRFGHLIEALSYGAPPHGGLALGFDRLICLLCGEDKAKTLRDVIAFPKSSSGNEI 664

Query: 572 LMGSPSTVSVEQLRELGLRI 591
           +  +P  V  +QL+EL +++
Sbjct: 665 MTQAPGEVEEDQLKELFIKV 684


>gi|332020819|gb|EGI61217.1| Aspartyl-tRNA synthetase, mitochondrial [Acromyrmex echinatior]
          Length = 651

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 201/603 (33%), Positives = 301/603 (49%), Gaps = 25/603 (4%)

Query: 1   MHRY--RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SA 57
           ++RY  RTH+CG+L + +VG  VRLSGW+   R      F+ +RD YG TQ++   D   
Sbjct: 65  VNRYVQRTHTCGELTLKNVGEEVRLSGWLEFQRMRK---FITLRDSYGSTQLLIPEDRKD 121

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             +I +++  E VL I G V+ R  +  N  + TG IE+  + +++L+ A + P     E
Sbjct: 122 LIKIIQNLSFESVLSIIGKVVPRPEDKQNKKMKTGDIEIYVESLKVLNAASQNPPVFIRE 181

Query: 118 -REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPE 175
             +  ES + KYR+L LR   L KN+  R+ +I  MR  +I E  F++  TP L  S+P 
Sbjct: 182 YSKAKESQQMKYRYLSLRYPELQKNLRMRSSLIMRMREFLIHECSFVDIETPTLFKSTPG 241

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GA++F+VP+R   G FY+L Q+PQQ+KQLLM  G DRYFQIA C+RDE  R DR P EF 
Sbjct: 242 GAQEFVVPTR-QPGIFYSLVQSPQQFKQLLMIGGLDRYFQIARCYRDETVRHDRQP-EFT 299

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           QLD+EMSFV++D ++N +EN+L   + E      +   F  I Y DA+  YGTDKPDLR 
Sbjct: 300 QLDIEMSFVDRDGVMNLIENLLMYSWPEELGS--IKVPFKLITYKDAMELYGTDKPDLRI 357

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
              + ++T  F     +   K+              K     ++  D +++        G
Sbjct: 358 SYQIKDLTHMFDLPVLKETMKLEDDKQKVYALVFSKKSKYLTKSIRDELSKIRNDYF--G 415

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
              +    +ES +        K  + +  + +     +Q+GD+     G  +        
Sbjct: 416 TTKLVQLKNESNSWKTQLDKLKLKSGIIAKDVSQYCKLQEGDAVLLAIGYRMDALKLLGK 475

Query: 416 ARNHIAQELG----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            R      L      I  +  E  WI DFP + + E    ++ +H+PFT P         
Sbjct: 476 LRTEFTNILEAKGEQIRSSEAELVWITDFPLFTFEE---TLESSHHPFTQPHPEDMKYLT 532

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D L ++   YDLV NG EIA G IR H + +  Q    + I     E +   +  A   
Sbjct: 533 TDPLKVRGLHYDLVMNGSEIAGGSIRIHDANLQRQILGMLNID----ETKLSHMLEALTY 588

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR V +L   K+++ V  FP +    DL+ G+P  +S E      ++ 
Sbjct: 589 GAPPHGGIAIGLDRFVCVLCNEKSIKNVIAFPKTMEGRDLMSGAPDIISDELKILYHIQT 648

Query: 592 VEN 594
           V+ 
Sbjct: 649 VDK 651


>gi|217032014|ref|ZP_03437515.1| hypothetical protein HPB128_187g41 [Helicobacter pylori B128]
 gi|216946324|gb|EEC24930.1| hypothetical protein HPB128_187g41 [Helicobacter pylori B128]
          Length = 492

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 184/504 (36%), Positives = 282/504 (55%), Gaps = 17/504 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+   G +   E +
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIE-IGNKSVNEDL 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLR    ++    R+ +    R  +  + F+E  TPIL+ ++PEGARD+LVPS
Sbjct: 121 RLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDYLVPS 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           RV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFRDED R+DR P EF Q+D EMSF 
Sbjct: 181 RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQP-EFTQIDAEMSFC 239

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +++D++  +E++L+ +F+     + +S  F R+ Y +A+  YG+DKPDLR  + +  V +
Sbjct: 240 DENDVMGVVEDLLQAIFKAIG--HDISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGD 297

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG--GNRAFCDRMNEWARSQGQPGLAYIFWR 362
            F  S   +FS I        + A+  KG     +R+    + E+ R  G  GLAY+  +
Sbjct: 298 CFRDSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYLQIK 357

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            D        GP+ K L+    + I  +   + GD  FF AGD      +    R  +A+
Sbjct: 358 ED-----GIKGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAE 412

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L +I+ +   F W+++FP +E  E       AH+PFTMP+             I+A  Y
Sbjct: 413 TLDLIDKDALNFLWVVNFPMFEKTE--NGYHAAHHPFTMPKNIECEDI----EEIEAHAY 466

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQ 506
           D+V NG E+  G IR H  E+  +
Sbjct: 467 DVVLNGVELGGGSIRIHKEEMTKK 490


>gi|144575341|gb|AAZ53617.2| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 567

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 199/586 (33%), Positives = 313/586 (53%), Gaps = 27/586 (4%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H+   L  SD+G  V + GWV  +R   G  F+ IRD+ GI Q V   +S          
Sbjct: 2   HNSKTLSKSDLGKTVTIQGWVQNIRKIKGKSFVIIRDYQGIFQAVVTQNSK----VDRFT 57

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E V+ + G++  R     N  I  G +E+    +E +S+A+++P  +  + E  E +R 
Sbjct: 58  KESVVKVQGILTQR--INPNTKIHNGDLEILVDNLETISLADQIPFEISDQLEVSEDLRL 115

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           ++R+LDLRR  + +N+  R +I + +RC +   NFIE  TPIL+ S+PEGAR FLVP+R 
Sbjct: 116 QFRYLDLRRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEGARSFLVPTR- 174

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            +G F+ALPQ+PQ YKQLLM S F++YFQ A  FRDED R DR   EF QLD+E  F   
Sbjct: 175 QKGKFFALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDRQ-FEFLQLDLEFGFATF 233

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           + I   +E ++R ++ +      ++ +F ++ Y +AI+ YGTDKPDLR    + ++ +  
Sbjct: 234 EKISEEIEALIRDLWTKI--FPNLAIDFPKLTYFEAIKNYGTDKPDLRFETKLFDL-DFL 290

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366
              +     K+  +     +   P       R F +++    +      L Y+       
Sbjct: 291 NDIDLLFQGKVRGLFLEKVLITKPEY-----RIFVEKI----QQNNAKTLLYLHIF---E 338

Query: 367 GNVAGMGPVA--KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           G +         K L     E   ++ +   G + F IA D           RN +A++ 
Sbjct: 339 GKITYFSFKTSEKLLIKTKIENWILQNNYHTG-TLFLIAADYKIASQALGALRNLVAKKY 397

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            +IN + F+F WI+++P +E +    K+  AH+PFT P    +     + L ++A  YDL
Sbjct: 398 KLINEDQFKFTWIINWPLFELD-INNKLTSAHHPFTAPTLESQQFLHKNPLKVQAQAYDL 456

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NGFE+ SG IR H +E+  Q F+ +G+ ++ +  +FG L RAF  G+PPHGG A G+D
Sbjct: 457 VLNGFELGSGSIRIHNAELQKQVFTILGLDQDQIHTQFGALLRAFNYGVPPHGGFAFGLD 516

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           R++M+L    ++R+V  FP++    DLL+ SP+ +    L E GL+
Sbjct: 517 RLIMILRKTNSIRDVIAFPVNSKGLDLLLDSPTEIDQNLLAEFGLK 562


>gi|144227528|gb|AAZ44326.2| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 567

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 199/586 (33%), Positives = 313/586 (53%), Gaps = 27/586 (4%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H+   L  SD+G  V + GWV  +R   G  F+ IRD+ GI Q V   +S          
Sbjct: 2   HNSKTLSKSDLGKTVTIQGWVQNIRKIKGKSFVIIRDYQGIFQAVVTQNSK----VDRFT 57

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E V+ + G++  R     N  I  G +E+    +E +S+A+++P  +  + E  E +R 
Sbjct: 58  KESVVKVQGILTQR--INPNTKIHNGDLEILVDNLETISLADQIPFEISDQLEVSEDLRL 115

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           ++R+LDLRR  + +N+  R +I + +RC +   NFIE  TPIL+ S+PEGAR FLVP+R 
Sbjct: 116 QFRYLDLRRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEGARSFLVPTR- 174

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            +G F+ALPQ+PQ YKQLLM S F++YFQ A  FRDED R DR   EF QLD+E  F   
Sbjct: 175 QKGKFFALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDRQ-FEFLQLDLEFGFPTF 233

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           + I   +E ++R ++ +      ++ +F ++ Y +AI+ YGTDKPDLR    + ++ +  
Sbjct: 234 EKISEEIEALIRDLWTKI--FPNLAIDFPKLTYFEAIKNYGTDKPDLRFETKLFDL-DFL 290

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366
              +     K+  +     +   P       R F +++    +      L Y+       
Sbjct: 291 NDIDLLFQGKVRGLFLEKVLITKPEY-----RIFVEKI----QQNNAKTLLYLHIF---E 338

Query: 367 GNVAGMGPVA--KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           G +         K L     E   ++ +   G + F IA D           RN +A++ 
Sbjct: 339 GKITYFSFKTSEKLLIKTKIENWILQNNYHTG-TLFLIAADYKIASQALGALRNLVAKKY 397

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            +IN + F+F WI+++P +E +    K+  AH+PFT P    +     + L ++A  YDL
Sbjct: 398 KLINEDQFKFAWIINWPLFELD-INNKLTSAHHPFTAPTLESQQFLHKNPLKVQAQAYDL 456

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NGFE+ SG IR H +E+  Q F+ +G+ ++ +  +FG L RAF  G+PPHGG A G+D
Sbjct: 457 VLNGFELGSGSIRIHNAELQKQVFTILGLDQDQIHTQFGALLRAFNYGVPPHGGFAFGLD 516

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           R++M+L    ++R+V  FP++    DLL+ SP+ +    L E GL+
Sbjct: 517 RLIMILRKTNSIRDVIAFPVNSKGLDLLLDSPTEIDQNLLAEFGLK 562


>gi|324508809|gb|ADY43716.1| Aspartyl-tRNA synthetase [Ascaris suum]
          Length = 617

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 191/615 (31%), Positives = 295/615 (47%), Gaps = 39/615 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACFE 60
           +  RTH+CG+L +   G    + GW+   R +    FL +RD YG  QV          E
Sbjct: 27  YTMRTHTCGELRIHHKGHTATIFGWLSFKRMNR---FLVLRDAYGSVQVRIPESRKDLLE 83

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGERE 119
            A     E  L + G+V  R     N N+ TG IE+    +E+L+ A  +LP  +  E E
Sbjct: 84  AADKANYESALKVTGVVADR-GSNRNPNMKTGDIEIVVDDLEVLNNAPNQLPYSLRTESE 142

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGAR 178
             E  R +YR+LDLR + + + +  R+ + + MR  +I   NF+E  TP L   +P GA 
Sbjct: 143 SIEETRLRYRYLDLRSNRMQQALRLRSEVAHLMRKFLIEIANFVEVETPTLFRRTPGGAS 202

Query: 179 DFLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           +F+VP  + N G FY+LPQ+PQQ+KQLLM  G DRY+QIA C+RDE  + DR P EF Q+
Sbjct: 203 EFIVPAPKPNLGKFYSLPQSPQQFKQLLMCGGLDRYYQIARCYRDEGSKLDRQP-EFTQV 261

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+E+SF  Q+D++  +E+++   + +       S  F R+ + +A R YG DKPDLR P 
Sbjct: 262 DVELSFTTQNDVMQLIEDLIIQSWPKELKNMMPSAPFKRLSFAEAYRLYGIDKPDLRIPW 321

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + + TE  +        K ++     +  A        NRA   R+ E        G  
Sbjct: 322 TIVDCTERLMFLNSSNVEKFVARLFIGKGLAKRI--TRANRAEWKRLIE----MNIKGQK 375

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +  +   +      +              +     +++ D+     GD           R
Sbjct: 376 FGIFTTSQKAWFKQIS----------NAQLMEEYHIEEEDAVVVSWGDDKGVQWTLGQLR 425

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL--KGNDLL 475
           + IA++ G+     F+F WI DFP +  N++  +++ AH+PFT P    E L  + + + 
Sbjct: 426 HLIAEKAGLRATPRFDFVWITDFPLFIRNDD-GQLESAHHPFTAPIPEHERLIFEPDQIE 484

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           +I A  YDLV NG E+  G IR H + V       +             L  A   G PP
Sbjct: 485 NITAQHYDLVLNGVELGGGSIRIHNANVQRYVIERIL---GESAENLNHLLEALSFGAPP 541

Query: 536 HGGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG A G+DR + LLLG  +    +R+V  FP S+   DL+   P+    EQL+  G+ +
Sbjct: 542 HGGFALGLDRYIALLLGKGDSSVGIRDVIAFPKSKEGRDLMSDCPAEPLEEQLQRYGISV 601

Query: 592 V----ENPKKILKIS 602
                +  K+++ + 
Sbjct: 602 RRQAADKEKEVVAVG 616


>gi|54020359|ref|YP_115651.1| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|53987532|gb|AAV27733.1| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 569

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 198/590 (33%), Positives = 313/590 (53%), Gaps = 27/590 (4%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H+   L  SD+G  V + GWV  +R   G  F+ IRD+ GI Q V   +S          
Sbjct: 4   HNSKTLSKSDLGKTVTIQGWVQNIRKIKGKSFVIIRDYQGIFQAVVTQNSK----VDRFT 59

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E V+ + G++  R     N  I  G +E+    +E +S+A+++P  +  + E  E +R 
Sbjct: 60  KESVVKVQGILTQR--INPNTKIHNGDLEILVDNLETISLADQIPFEISDQLEVSEDLRL 117

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           ++R+LDLRR  + +N+  R +I + +RC +   NFIE  TPIL+ S+PEGAR FLVP+R 
Sbjct: 118 QFRYLDLRRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEGARSFLVPTR- 176

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            +G F+ALPQ+PQ YKQLLM S F++YFQ A  FRDED R DR   EF QLD+E  F   
Sbjct: 177 QKGKFFALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDRQ-FEFLQLDLEFGFATF 235

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           + I   +E ++R ++ +      ++ +F ++ Y +AI+ YGTDKPDLR    + ++ +  
Sbjct: 236 EKISEEIEALIRDLWTKI--FPNLAIDFPKLTYFEAIKNYGTDKPDLRFETKLFDL-DFL 292

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366
            + +     K+  +     +   P       R F +++    +      L Y+       
Sbjct: 293 NNIDLLFQGKVRGLFLEKVLITKPEY-----RIFVEKI----QQNNAKTLLYLHIF---E 340

Query: 367 GNVAGMGPVA--KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           G +         K L     E   ++ +   G + F IA D           RN +A++ 
Sbjct: 341 GKITYFSFKTSQKLLIKTKIENWILQNNYHTG-TLFLIAADYKIASQALGALRNLVAKKY 399

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            +IN + F+F WI+++P +E +    K+  AH+PFT P    +     + L ++A  YDL
Sbjct: 400 KLINGDQFKFAWIINWPLFELD-INNKLTSAHHPFTAPTLESQQFLHKNPLKVQAQAYDL 458

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NGFE+ SG IR H  E+  Q F+ +G+ ++ +  +FG L RAF  G+PPHGG A G+D
Sbjct: 459 VLNGFELGSGSIRIHNVELQKQVFTILGLDQDQIHTQFGALLRAFNYGVPPHGGFAFGLD 518

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           R++M+L    ++R+V  FP++    DLL+ SP+ +    L E G +  + 
Sbjct: 519 RLIMILRKTNSIRDVIAFPVNSKGLDLLLDSPTEIDQNLLAEFGFKKTDK 568


>gi|312601217|gb|ADQ90472.1| Aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 567

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 199/586 (33%), Positives = 311/586 (53%), Gaps = 27/586 (4%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H+   L  SD+G  V + GWV  +R   G  F+ IRD+ GI Q V   +S          
Sbjct: 2   HNSKTLSKSDLGKTVTIQGWVQNIRKIKGKSFVIIRDYQGIFQAVVTQNSK----VDRFT 57

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E V+ + G++  R     N  I  G +E+    +E +S+A+++P  +  + E  E +R 
Sbjct: 58  KESVVKVQGILTQR--INPNTKIHNGDLEILVDNLETISLADQIPFEISDQLEVSEDLRL 115

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           ++R+LDLRR  + +N+  R +I + +RC +   NFIE  TPIL+ S+PEGAR FLVP+R 
Sbjct: 116 QFRYLDLRRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEGARSFLVPTR- 174

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            +G F+ALPQ+PQ YKQLLM S F++YFQ A  FRDED R DR   EF QLD+E  F   
Sbjct: 175 QKGKFFALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDRQ-FEFLQLDLEFGFPTF 233

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           + I   +E ++R ++ +      +  +F ++ Y +AI+ YGTDKPDLR    + ++ +  
Sbjct: 234 EKISEEIEALIRDLWTKI--FPNLVIDFPKLTYFEAIKNYGTDKPDLRFETKLFDL-DFL 290

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366
              +     K+  +     +   P       R F +++    +      L Y+       
Sbjct: 291 NDIDLLFQGKVRGLFLEKVLITKPEY-----RIFVEKI----QQNNAKTLLYLHIF---E 338

Query: 367 GNVAGMGPVA--KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           G +         K L     E   ++ +   G + F IA D           RN +A++ 
Sbjct: 339 GKITYFSFKTSEKLLIKTKIENWILQNNYHTG-TLFLIAADYKIASQALGALRNLVAKKY 397

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            +IN + F+F WI+++P +E +    K+  AH+PFT P    +     + L ++A  YDL
Sbjct: 398 KLINEDQFKFAWIINWPLFELD-INNKLTSAHHPFTAPTLESQQFLHKNPLKVQAQAYDL 456

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           V NGFE+ SG IR H  E+  Q F+ +G+ ++ +  +FG L RAF  G+PPHGG A G+D
Sbjct: 457 VLNGFELGSGSIRIHNVELQKQVFTILGLDQDQIHTQFGALLRAFNYGVPPHGGFAFGLD 516

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           R++M+L    ++R+V  FP++    DLL+ SP+ +    L E GL+
Sbjct: 517 RLIMILRKTNSIRDVIAFPVNSKGLDLLLDSPTEIDQNLLAEFGLK 562


>gi|195344600|ref|XP_002038869.1| GM17213 [Drosophila sechellia]
 gi|194133999|gb|EDW55515.1| GM17213 [Drosophila sechellia]
          Length = 1088

 Score =  439 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 190/599 (31%), Positives = 293/599 (48%), Gaps = 73/599 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L  +D+   V + GW+   R +    F  +RD YG TQV+ +P +   E    
Sbjct: 463 RTHNCGELTSNDINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLSPKTYGMEEYAE 519

Query: 65  --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
             V  E ++ ++G V+ R A TIN  + TG +E+ A K+ +L+ A++       +     
Sbjct: 520 TGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRKFNRAG 579

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
           E +R  +R+LDLR + +  N+  R+ +I  MR  +I    F+E  TP L   +P GA++F
Sbjct: 580 ERLRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 639

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 640 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 697

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF  +DDI+  +E  LR  + +  +   +   F RI Y++A+ +YG DKPD R   +++
Sbjct: 698 LSFTSRDDIMQLIEETLRYSWPK--DFPRLQTPFRRITYEEAMEKYGNDKPDTRFGFLLN 755

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+E                                     ++ +E+       G   I 
Sbjct: 756 NVSEI-----------------------------------IEKSDEFKEKYDDLGAYAIV 780

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            R  E+      G   KH   +   + R  L     D   F+  +               
Sbjct: 781 VRASEA---FWNGAARKHYESLGKSSRRALLGRIRLDYQDFLVENAK------------- 824

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES---LKGNDLLSI 477
                I   N F F W++DFP +E N E  +++  H+PFT+P             +L SI
Sbjct: 825 -----IKKPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDLENFATSCENLESI 879

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           ++  YDLV NG E+  G IR H  ++       +        +    L  A + G PPHG
Sbjct: 880 RSQAYDLVLNGQEVGGGSIRIHDRDMQHFILEQILKIPH---DHLSHLLSALESGCPPHG 936

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GIA G+DR + +L  A+++R+V  FP S N  D L  +P  +S E++R   L +VE  +
Sbjct: 937 GIALGLDRFIAILCRARSIRDVIAFPKSLNGRDPLSNAPVPISDEEMRLYHLSVVEEEE 995



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 4/115 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 292 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLSDTFLS 347

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              + V+ I G V+ R    +N    TG++E+S   +++L+  +    P+  + +
Sbjct: 348 TPEQTVIQIVGKVLGRPKANVNLKYDTGEVEVSVTSVKVLNPDDPYDGPIKAKEK 402



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SCG+L     G FV LSG + + R +    F ++RD  G    +   +     +A+ + +
Sbjct: 148 SCGELRNHHCGLFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHPRVARRMNN 204

Query: 68  E---WVLCIDGLVMSRSAETINANIITGQIELSAQKI 101
                 L I GLVM R   + N  + TG+IE+  Q I
Sbjct: 205 MPENTTLTIVGLVMRRPHNSCNQTMPTGEIEVEVQDI 241


>gi|72080582|ref|YP_287640.1| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 561

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 197/580 (33%), Positives = 310/580 (53%), Gaps = 27/580 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             SD+G  V + GWV  +R   G  F+ IRD+ GI Q V   +S           E V+ 
Sbjct: 2   SKSDLGKTVTIQGWVQNIRKIKGKSFVIIRDYQGIFQAVVTQNSK----VDRFTKESVVK 57

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G++  R     N  I  G +E+    +E +S+A+++P  +  + E  E +R ++R+LD
Sbjct: 58  VQGILTQR--INPNTKIHNGDLEILVDNLETISLADQIPFEISDQLEVSEDLRLQFRYLD 115

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LRR  + +N+  R +I + +RC +   NFIE  TPIL+ S+PEGAR FLVP+R  +G F+
Sbjct: 116 LRRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEGARSFLVPTR-QKGKFF 174

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           ALPQ+PQ YKQLLM S F++YFQ A  FRDED R DR   EF QLD+E  F   + I   
Sbjct: 175 ALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDRQ-FEFLQLDLEFGFATFEKISEE 233

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +E ++R ++ +      ++ +F ++ Y +AI+ YGTDKPDLR    + ++ +     +  
Sbjct: 234 IEALIRDLWTKI--FPNLAIDFPKLTYFEAIKNYGTDKPDLRFETKLFDL-DFLNDIDLL 290

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
              K+  +     +   P       R F +++    +      L Y+       G +   
Sbjct: 291 FQGKVRGLFLEKVLITKPEY-----RIFVEKI----QQNNAKTLLYLHIF---EGKITYF 338

Query: 373 GPVA--KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
                 K L     E   ++ +   G + F IA D           RN +A++  +IN +
Sbjct: 339 SFKTSEKLLIKTKIENWILQNNYHTG-TLFLIAADYKIASQALGALRNLVAKKYKLINED 397

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
            F+F WI+++P +E +    K+  AH+PFT P    +     + L ++A  YDLV NGFE
Sbjct: 398 QFKFTWIINWPLFELD-INNKLTSAHHPFTAPTLESQQFLHKNPLKVQAQAYDLVLNGFE 456

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           + SG IR H +E+  Q F+ +G+ ++ +  +FG L RAF  G+PPHGG A G+DR++M+L
Sbjct: 457 LGSGSIRIHNAELQKQVFTILGLDQDQIHTQFGALLRAFNYGVPPHGGFAFGLDRLIMIL 516

Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
               ++R+V  FP++    DLL+ SP+ +    L E GL+
Sbjct: 517 RKTNSIRDVIAFPVNSKGLDLLLDSPTEIDQNLLAEFGLK 556


>gi|71893591|ref|YP_279037.1| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 561

 Score =  436 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 197/580 (33%), Positives = 310/580 (53%), Gaps = 27/580 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             SD+G  V + GWV  +R   G  F+ IRD+ GI Q V   +S           E V+ 
Sbjct: 2   SKSDLGKTVTIQGWVQNIRKIKGKSFVIIRDYQGIFQAVVTQNSK----VDRFTKESVVK 57

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G++  R     N  I  G +E+    +E +S+A+++P  +  + E  E +R ++R+LD
Sbjct: 58  VQGILTQR--INPNTKIHNGDLEILVDNLETISLADQIPFEISDQLEVSEDLRLQFRYLD 115

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LRR  + +N+  R +I + +RC +   NFIE  TPIL+ S+PEGAR FLVP+R  +G F+
Sbjct: 116 LRRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEGARSFLVPTR-QKGKFF 174

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           ALPQ+PQ YKQLLM S F++YFQ A  FRDED R DR   EF QLD+E  F   + I   
Sbjct: 175 ALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDRQ-FEFLQLDLEFGFPTFEKISEE 233

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +E ++R ++ +      ++ +F ++ Y +AI+ YGTDKPDLR    + ++ +     +  
Sbjct: 234 IEALIRDLWTKI--FPNLAIDFPKLTYFEAIKNYGTDKPDLRFETKLFDL-DFLNDIDLL 290

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
              K+  +     +   P       R F +++    +      L Y+       G +   
Sbjct: 291 FQGKVRGLFLEKVLITKPEY-----RIFVEKI----QQNNAKTLLYLHIF---EGKITYF 338

Query: 373 GPVA--KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
                 K L     E   ++ +   G + F IA D           RN +A++  +IN +
Sbjct: 339 SFKTSEKLLIKTKIENWILQNNYHTG-TLFLIAADYKIASQALGALRNLVAKKYKLINED 397

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
            F+F WI+++P +E +    K+  AH+PFT P    +     + L ++A  YDLV NGFE
Sbjct: 398 QFKFAWIINWPLFELD-INNKLTSAHHPFTAPTLESQQFLHKNPLKVQAQAYDLVLNGFE 456

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           + SG IR H +E+  Q F+ +G+ ++ +  +FG L RAF  G+PPHGG A G+DR++M+L
Sbjct: 457 LGSGSIRIHNAELQKQVFTILGLDQDQIHTQFGALLRAFNYGVPPHGGFAFGLDRLIMIL 516

Query: 551 LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
               ++R+V  FP++    DLL+ SP+ +    L E GL+
Sbjct: 517 RKTNSIRDVIAFPVNSKGLDLLLDSPTEIDQNLLAEFGLK 556


>gi|193216721|ref|YP_001999963.1| aspartyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193002044|gb|ACF07259.1| aspartyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 557

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 182/584 (31%), Positives = 286/584 (48%), Gaps = 36/584 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G L + D G  V L GW+   R     +F+D RD  G+ Q+V +  S        +  E 
Sbjct: 7   GKLRLGDEGKAVTLYGWIANKRKFKNQLFIDFRDSSGLVQLVFHDVSDPL-----LTKES 61

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L I G V  R     N  I +G++E+  ++ EIL+ ++++P  V       E +R +YR
Sbjct: 62  CLKITGEVKKRLEA--NLEIPSGEVEVHVKEYEILNSSKQIPFEVNKTNSANEDLRLEYR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           FLDLR++ +  N+  R +++  +R      NFIE  TPIL  S+PEGARD+LVP+R  +G
Sbjct: 120 FLDLRQEKMLANLKLRHKLLLEIRNYFDKSNFIEVETPILCKSTPEGARDYLVPTR-RKG 178

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            F+ALPQ+PQ YKQLLMASG +RYFQIA  FRDED R DR P EF QLD+EMSF   +++
Sbjct: 179 KFFALPQSPQLYKQLLMASGVERYFQIARVFRDEDLRKDRQP-EFTQLDIEMSFGGMEEL 237

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE-HFVH 308
            +  E++ +           +   F  + Y  ++  YG DKPD R   +++++ +     
Sbjct: 238 FSICEDMWKETLGNLG--YKIKTPFKHMDYFYSMAHYGNDKPDTRYEFLINDLGDSLGAF 295

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
                F K +  +                    D      +   Q         ++ + N
Sbjct: 296 YPKNTFIKAIFFD-----------------RNIDDNLSLVKEIFQKNQGEQLEVINLNAN 338

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
            +    +         + +     + +                     R  + +   + N
Sbjct: 339 KSQDKKL------DIIKEMAKSQGIANPTIIISSGVKEENALKALGAVRVTLNELYRLAN 392

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN-DLLSIKAFQYDLVCN 487
            +   F WI+++P +E++EE +    AH+ FT             +   ++A  YDLV N
Sbjct: 393 EDELNFLWIVNWPMFEFDEESQTWAPAHHAFTQFDESTVKYLETKEYSKVRAKSYDLVLN 452

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           GFE+ SG IR H  EV  + F+ + +S +  +N+FG   +AF  G+PPH G+A GI+R++
Sbjct: 453 GFELGSGSIRIHDPEVQKKMFNVLNLSPKEQQNKFGFFLKAFDYGLPPHNGVAFGIERVL 512

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           M+L  + ++R+V  FP +    DLL  SPS V   QL+E GL++
Sbjct: 513 MILTKSASIRDVIAFPKNAKGLDLLSASPSEVLDSQLKEYGLKL 556


>gi|32490862|ref|NP_871116.1| hypothetical protein WGLp113 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166068|dbj|BAC24259.1| aspS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 560

 Score =  435 bits (1119), Expect = e-119,   Method: Composition-based stats.
 Identities = 189/575 (32%), Positives = 301/575 (52%), Gaps = 18/575 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--A 62
           R   C  +  S VG  V L GWV  +R  G ++F+D RDH GI Q+          I  +
Sbjct: 2   RNIYCYQINKSHVGKIVTLCGWVENIRDCGKLLFIDFRDHTGIIQICFECFDKNIHINES 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +++E  + I G+V  +  ++++      ++E+ A  + I+++++   LP+    +  E
Sbjct: 62  KKLKNESCVQITGIVKIKKIKSLSKE--PQEVEVKATNLNIINISDP--LPIDFNYKNSE 117

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
               K+R+L +RR  L K +  R++I N +R  M    FI+  TPIL+ S+ EGARD+LV
Sbjct: 118 EKYLKFRYLYIRRSKLFKILKLRSKITNYIRKVMEKRKFIDIETPILSHSTTEGARDYLV 177

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            SR++ G FY+LPQ+PQ +KQ+LM SG D+Y+QIA CFRDED RSDR P EF Q+D E+S
Sbjct: 178 HSRIHPGMFYSLPQSPQLFKQILMISGIDKYYQIAKCFRDEDLRSDRQP-EFTQVDCEIS 236

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   + + + +E +++ ++ +F N     NNF  I Y+D+I R+G+DKPDLRN + + NV
Sbjct: 237 FDNGEKVRDLIEILIKKLWIKFFNFE--LNNFPIITYNDSIIRFGSDKPDLRNSLELINV 294

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           T  F  +E        +++    +  I       N     +   + +   +  +   +  
Sbjct: 295 TNLFKINERNKI----ALSKYKILAIILPLKVKLNFDKLKKYTNYLKYYIKKDVFLAYVE 350

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                  +    +  + + +    + +   +++ +    IA         A   R  I  
Sbjct: 351 DINKYEFSFFEEIICNDSNIVDNLLNL---IKNKNKIILIASRKDCVYEIAGKLRIKIGL 407

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E  I +   ++  WI++FP ++   +EKK+   H+PFT P+   +S    + LS  +  Y
Sbjct: 408 EFNITDIESWKPVWIVNFPLFK--TKEKKLVSVHHPFTSPKNFNKSKIFKNPLSFVSNSY 465

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG EI SG  R H  E+    F  +GI++E     FG    A + G PPH G A G
Sbjct: 466 DLVINGVEIGSGSSRIHKYEIQKIIFDVLGIAEETQNKNFGFFLNALKYGAPPHAGFAFG 525

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
           +DRIVML+    N+R V  FP + +  DL+ GSPS
Sbjct: 526 LDRIVMLISKTNNIRNVIAFPKTTSAYDLMTGSPS 560


>gi|330896125|gb|EGH28346.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 397

 Score =  434 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 148/401 (36%), Positives = 221/401 (55%), Gaps = 6/401 (1%)

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF+ ++DI+   E 
Sbjct: 1   QSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSFLNEEDIIGLTEK 59

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V +     EF+VFS
Sbjct: 60  MVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVADQLTGVEFKVFS 117

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPV 375
              +   G              R+  D   ++    G  GLAYI       G      P+
Sbjct: 118 GPANDPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVNERAKGPEGLQSPI 177

Query: 376 AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435
            K +   N   I  R+   DGD  FF A             R  I  +L +  C  +   
Sbjct: 178 VKFIPEDNLNVILDRVGAVDGDIVFFGADKFKIVSEALGALRIKIGNDLKLHTCE-WAPM 236

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           W++DFP +E N++       H+PFT P+   E L+ N   +  +  YD+V NG E+  G 
Sbjct: 237 WVVDFPMFEENDD-GSFTALHHPFTAPKCTPEELEAN-PATALSRAYDMVLNGTELGGGS 294

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           IR H  E+    F  +GI+++  + +FG L  A + G PPHGG+A G+DR+VML+ GA++
Sbjct: 295 IRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGAQS 354

Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +REV  FP +Q+  D++  +P  V  + LREL +R+ E PK
Sbjct: 355 IREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPK 395


>gi|320167572|gb|EFW44471.1| aspartate tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 654

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 191/625 (30%), Positives = 302/625 (48%), Gaps = 71/625 (11%)

Query: 4   YRTHSCGDLGVSD-------------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           YR+H+CG +  ++             +G  V+++GW+   R  G  +FL IRD +G  QV
Sbjct: 64  YRSHTCGAVAKANAESAVGQPGSIPCIGDQVKVAGWLEFKRLVGDNVFLSIRDIHGSVQV 123

Query: 51  VAN-PDSACF----EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105
           V    D   F     +   +  + V+ I G+V +R    +        +E++A  + +L+
Sbjct: 124 VFRQEDFVGFTEVRALIDKLPKQSVVSISGIVTARPQTAVTEASA---VEIAASSLVVLN 180

Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
            A  +P     +    E +R ++R+ DLR   L  ++  R+++   +R  +  E F+E  
Sbjct: 181 RATLVPFDHQ-QTNVSEELRQQHRYYDLRNPKLQHSLQVRSKVTQVIRSVLADEGFLEVE 239

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP L   +PEGAR+FLVP+R   G F+ALPQ+PQQYKQ+LM +G D+YFQ A C+RDED 
Sbjct: 240 TPTLFKRTPEGAREFLVPTRT-PGQFFALPQSPQQYKQMLMVAGVDKYFQFARCYRDEDL 298

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           R+DR P EF QLDMEMSF+   DI N +E ++   + E      +   F R+ Y +A+ +
Sbjct: 299 RADRQP-EFTQLDMEMSFIRPIDIQNVIEKIVARAWLEVHGMK-LELPFRRMPYQEAMEQ 356

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
           YG DKPD R  + + N+         +   ++LS       + +                
Sbjct: 357 YGIDKPDTRFGMKLQNL---------QACKELLSQASVARGFRVQVP------------- 394

Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN---IVNTEAIRVRLDMQDGDSCFFI 402
           E  RS  +  L  +         +A    V K  N       +A   +LD+   D     
Sbjct: 395 ESLRSPFKKALPRLI------KELALRNAVTKPFNGLPAALEDATLAQLDLVGADFVCIA 448

Query: 403 AGDPLK-FCSFAADARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKK----- 451
            GD  +         R  +A EL      + N N F F W+ DFP +  ++  +      
Sbjct: 449 TGDHAESVLQRLGKLRLAVAAELERLGHPLRNPNEFHFLWVEDFPLFTESDTAQAADGTM 508

Query: 452 -IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
            ++  H+PFT P      L   D   ++   YD+V NG+E+  G IR H S++  +    
Sbjct: 509 ALEATHHPFTAPHPNDAHLVFTDPRKVRGLHYDIVVNGWELGGGSIRIHDSDMQERLIRE 568

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           V  +      +F  L +A + G PPHGGIA G DR++ +LL A+++REV  FP + +  D
Sbjct: 569 VLGADIT---KFSHLLKALRTGAPPHGGIALGFDRMMAILLSARSLREVIAFPKAFSGRD 625

Query: 571 LLMGSPSTVSVEQLRELGLRIVENP 595
           L   +PS +S + L + GL+++  P
Sbjct: 626 LTCEAPSAISDKDLADYGLKLIAQP 650


>gi|32566633|ref|NP_506019.2| aspartyl(D) tRNA Synthetase family member (drs-2) [Caenorhabditis
           elegans]
 gi|24817292|emb|CAB04081.2| C. elegans protein F10C2.6, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 593

 Score =  429 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 188/603 (31%), Positives = 298/603 (49%), Gaps = 47/603 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH C +L  S+    V + GW+   R      F  +RD YG  Q   +  S    + K 
Sbjct: 24  RTHICDELSTSNKNEKVSVMGWLSHKRM---DRFFVLRDAYGSVQAKISASSKLQSLLKD 80

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E V+ +DG+V+ R  +  N+ + TG IE+  +++ +L+ A    +P+  +    E  
Sbjct: 81  IPYESVVRVDGIVVDR-GDNRNSKMKTGDIEIDVEELTVLNKA-TSNIPMLPDANANERT 138

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVP 183
           R KYR++DLR D L K++  R+  ++++R  ++ ++ F++  TP L   +P GA +F+VP
Sbjct: 139 RLKYRYIDLRSDKLQKSLRLRSEFVHNVRRFLVEKSGFVDVETPTLFRRTPGGAAEFVVP 198

Query: 184 -SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
               NQG  Y+LPQ+PQQ+KQLLM    DRYFQIA C+RDE  + DR P EF Q+D+EMS
Sbjct: 199 APSPNQGLAYSLPQSPQQFKQLLMVGAIDRYFQIARCYRDEGSKGDRQP-EFTQVDVEMS 257

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+ ++  +E+++   + E  N     + F RI Y DA+R YG DKPD+R P  + +V
Sbjct: 258 FTTQNGVMQLIEDMIISAWPESLNHIKPKSPFPRIPYSDAMRLYGIDKPDMRIPWQIDDV 317

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
                 ++   F +    +  +    +  +G G         NEW R            +
Sbjct: 318 -----DNDIFEFLQKDIDDDTWRSRILVCRGAGKTTISNSMKNEWKR----------LIQ 362

Query: 363 LDESG-NVAGMGPVAK-HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
           ++E+G N A   P  K      + + +  +  + D D      G+               
Sbjct: 363 MNENGKNFAICHPSQKRWFKPFDNQKLIDQFGLIDEDVLIVCWGNSEGVYWTL------- 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND----LLS 476
            +  G+ + +     WI+DFP + +  EE ++   H+PFT P      +  ++    LL 
Sbjct: 416 -EVCGLRSKSNVTAHWIVDFPLFSF--EEGQLVSTHHPFTAPLEKDIDILYSNDIDKLLQ 472

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I    YDLV NG E+  G IR   SE+       +G   + +E     L  A   G PPH
Sbjct: 473 ITGQHYDLVINGVEMGGGSIRIENSEIQRHVLKVLGEPTDEME----HLLNALSHGAPPH 528

Query: 537 GGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           GG A G+DR V +L    N    VR+V  FP ++N  DL+  +P+T+S +QL   G+ ++
Sbjct: 529 GGFALGLDRFVAMLTSDGNPLTPVRDVIAFPKTKNGKDLMSDAPATLSQKQLERYGISLL 588

Query: 593 ENP 595
            N 
Sbjct: 589 PNA 591


>gi|268557324|ref|XP_002636651.1| C. briggsae CBR-DRS-2 protein [Caenorhabditis briggsae]
          Length = 599

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 190/604 (31%), Positives = 297/604 (49%), Gaps = 42/604 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+CG+L  S+    V + GW+   R      F  +RD YG  Q     +S    + K 
Sbjct: 23  RSHTCGELNASNKDEKVSVMGWLSHKRM---DRFFVLRDAYGSVQATIPENSELKRLLKD 79

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E ++ +D  V+    E  N  + TG IE+  +K+ +L+ A    LP+       E  
Sbjct: 80  LPYESIVRVD-GVVVDRGENRNKAMKTGDIEIGVKKLTVLNKAVS-NLPLLPGVNANERT 137

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVP 183
           R KYR++DLR D L +++  R+  ++++R  ++ ++ F++  TP L   +P GA +F+VP
Sbjct: 138 RLKYRYIDLRSDKLQRSLRIRSEFVHNLRKFLVEKSGFVDVETPTLFRRTPGGATEFVVP 197

Query: 184 -SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
               N G  Y+LPQ+PQQ+KQLLM    DRYFQIA C+RDE  + DR P EF Q+D+EMS
Sbjct: 198 APSPNHGMAYSLPQSPQQFKQLLMVGAIDRYFQIARCYRDEGSKGDRQP-EFTQVDVEMS 256

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F  Q+ ++  +E+++   + E  N     + F RI Y  A+ +YG DKPD+R P  + +V
Sbjct: 257 FTTQEGVMQLIEDMVISAWPESLNHIKPKSPFPRISYSGAMAKYGIDKPDMRIPWEIEDV 316

Query: 303 TEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
                     +F+ +   +   +    I  +G G         NEW R            
Sbjct: 317 K-------SGIFNFLKKNDCENWRARVIVCRGTGKTSISNSIKNEWKR----------LI 359

Query: 362 RLDESG-NVAGMGPVAK-HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           +++E+G N A   P  K     V  + I     + + D      G            RN+
Sbjct: 360 QMNENGRNFAICHPSQKSWFKSVENQKIVDEFVLTEDDVLIVCWGHSDGVYWTLGQLRNY 419

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-QGGMESLKGND---LL 475
           +A+  G+ +       W++DFP + +  EE ++   H+PFT P +   E L  +D   LL
Sbjct: 420 VAEVCGLRSEGGVTAHWVVDFPLFSF--EEGQLVSTHHPFTAPVEKDKEMLFESDNQKLL 477

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            I    YDLV NG E+  G +R   SE+       +G   E +E     L  A   G PP
Sbjct: 478 QITGQHYDLVMNGVEMGGGSVRIENSEIQRHVLKVLGEPTEEME----HLLNALSYGAPP 533

Query: 536 HGGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           HGG A G+DR V +L    N    VR+V  FP ++N  DL+  +P+T+S +QL+  G+ +
Sbjct: 534 HGGFALGLDRFVAMLASDGNPLTPVRDVIAFPKTKNGKDLMSDAPTTLSQKQLQRYGITL 593

Query: 592 VENP 595
             + 
Sbjct: 594 RSDA 597


>gi|13507785|ref|NP_109734.1| aspartyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2500968|sp|P75068|SYD_MYCPN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|1673765|gb|AAB95756.1| aspartyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|301633248|gb|ADK86802.1| aspartate--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 557

 Score =  426 bits (1094), Expect = e-117,   Method: Composition-based stats.
 Identities = 169/575 (29%), Positives = 284/575 (49%), Gaps = 45/575 (7%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+L    +   V ++GWV R++  G + F+ + D     QV         E  K +  E
Sbjct: 15  IGNLTSEHLNKTVTIAGWVKRIKKLGELNFVIVGDKTNTIQVTCK----NKEQVKYLTRE 70

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G +           + + + E++   I + + ++  PL +  + +  E +R +Y
Sbjct: 71  DLVIVKGKL---------KRLDSVRFEITNPTITLFAKSKTPPLIIEDKTDALEEVRLRY 121

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR  + K +  R ++  ++R  +    FIE  TP LT S+PEGARDFLVP+R+ +
Sbjct: 122 RYLDLRRPVMQKRLALRHKVTLAVRNWLDQMGFIEVETPTLTKSTPEGARDFLVPARIRE 181

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            SFYALPQ+PQ YKQLLM  G ++YFQIA  +RDED R DR P E  Q+D+E++F  ++ 
Sbjct: 182 HSFYALPQSPQIYKQLLMVGGTEKYFQIAHVYRDEDSRKDRQP-EHTQIDLEVAFYTKEM 240

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           +++ ++ +   VF +  N   +   F  + + +A  R+G+DKPDLR    + + T+ F  
Sbjct: 241 VMDLIQRLFVDVFRQVLNIK-LKKPFPVLKFAEAFNRFGSDKPDLRYGFELEDCTDLFQD 299

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           S  + F+ +++         +P      +      + + A+  G                
Sbjct: 300 SPNQ-FTNLINAGGIVGGIQLPNL--YLDEVSFKALRKLAKDNG---------------- 340

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
                 V+         +++  LD+   G           +  +     RN +   L ++
Sbjct: 341 ------VSLEFYSDKASSLKQPLDLPLAGTILLVAHKSKTQAWTALGAIRNELKYHLNLV 394

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             N + FCWI+DFP YE++E+E+K   AHN F+ PQ        N      + QYDLV N
Sbjct: 395 KPNQYSFCWIVDFPLYEFDEKEQKWVSAHNMFSNPQPQWLVNFENHKAEALSEQYDLVLN 454

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           GFE+ SG IR H  EV  +   ++G+       +FG +  A+Q G P H G+  G+DR++
Sbjct: 455 GFELGSGSIRIHDPEVQTRLMQSLGVDP----QQFGFVMEAYQYGAPVHAGMGLGLDRLM 510

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           M++    N+REV  FP +    ++   +P  V ++
Sbjct: 511 MIINNVDNIREVMAFPKNAQGIEMHTNAPDQVDIK 545


>gi|328781302|ref|XP_001121020.2| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Apis
           mellifera]
          Length = 581

 Score =  422 bits (1084), Expect = e-115,   Method: Composition-based stats.
 Identities = 190/602 (31%), Positives = 311/602 (51%), Gaps = 29/602 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACF 59
           M++Y ++      ++     V L GW+   R +    FL +RD YG TQ++         
Sbjct: 1   MYKYNSNHKKVSMITIQRENVHLYGWLEFSRINK---FLTLRDSYGSTQLIIPEHKKDLQ 57

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-GER 118
           E+AK +  E VL I+G V+ R     N  + TG IE+  + I++L++A      +     
Sbjct: 58  EMAKKLTFESVLSIEGKVLKRPKGQENKFMTTGDIEVEIKSIKVLNMANSNLPFIIRDYN 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGA 177
           +  ES + KYR++ LR   L KN+  R++++  MR  +I +  F++  TP L  ++PEGA
Sbjct: 118 KAKESTQMKYRYISLRYPQLQKNLRLRSKVVMKMREYLIKQCNFVDIETPTLFKNTPEGA 177

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           ++F+VP++   G FY+L Q+PQQ+KQLLM  GFDRYFQ+A C+R+E PR DR   EF QL
Sbjct: 178 QEFIVPTKF-PGQFYSLVQSPQQFKQLLMVGGFDRYFQLARCYRNEQPRHDRQL-EFTQL 235

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV+ + I+  +EN+L   + E    + ++  F  + YD+A+  YGTDKPDLR P 
Sbjct: 236 DIEMSFVDCEGIMKLIENLLVYSWPE--ESHELTIPFKCMKYDNAMELYGTDKPDLRIPQ 293

Query: 298 IMHNVTEHFVHSE-FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
            ++ +TE   +S   +      S            K      +  D +++   +      
Sbjct: 294 QLYRLTETIDYSALIQDLKMEQSDKFEIYALVFSEKYNFLTNSVKDAISKLQSNY----- 348

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            + F +L ++  +    P    +  +  E ++ +L++++GD  F   G+ +         
Sbjct: 349 -FPFVKLIQT-KIPNKSP---FITSIIKENVQQQLNLKEGDVLFLACGEKVDTQLLLGKI 403

Query: 417 RNH----IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
           R      +  +   I     E  WI DFP + +N +   ++  H+PFT P      L   
Sbjct: 404 RLEFTNFLENKGEKIRTIKDELLWITDFPLFSFNTKTNLLETMHHPFTQPHSDDVELLVK 463

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           + L ++   YDLV NGFEIA G IR H S++  Q    + I+    E+    L  A + G
Sbjct: 464 NPLKVRGLHYDLVMNGFEIAGGSIRIHKSKLQKQILRMLKIN----ESSLMHLLDALESG 519

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G+DR++ LL   +N++ V  FP + +  DL+ G+P ++S E+ +   +R +
Sbjct: 520 APPHGGIAIGLDRLISLLCNEQNIKNVIAFPKTMSGRDLMSGAPISISEEEKQLYHIRTI 579

Query: 593 EN 594
             
Sbjct: 580 NE 581


>gi|308504263|ref|XP_003114315.1| CRE-DARS-2 protein [Caenorhabditis remanei]
 gi|308261700|gb|EFP05653.1| CRE-DARS-2 protein [Caenorhabditis remanei]
          Length = 637

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 188/608 (30%), Positives = 297/608 (48%), Gaps = 57/608 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+C +L  S+    V + GW+   R      F  +RD YG  Q     +S   ++ K 
Sbjct: 23  RSHTCDELNASNKNEKVSVMGWLSHKRM---DRFFVLRDAYGSVQAKIQENSELKQLLKE 79

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E V+ +DG V+ R  E  N  + TG IE++ +++ +L+ A  + +P+  + +  E  
Sbjct: 80  LPYESVIRVDGTVVDR-GENRNNKMKTGDIEINVEQLTVLNKA-SVNIPMLPDVKSNEKT 137

Query: 125 RFKYRFLDLRRDTLHKNI---------------VKRTRIINSMRCRMIAEN-FIECSTPI 168
           R KYR++DLR D L +                   R+  ++++R  ++ ++ F++  TP 
Sbjct: 138 RLKYRYIDLRSDKLQRYRLQLEDDILVSLYRALRIRSEFVHNLRKFLVEKSGFVDVDTPT 197

Query: 169 LTASSPEGARDFLVP-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L   +P GA +F+VP    N G  Y+LPQ+PQQ+KQLLM  G DRYFQIA C+RDE  + 
Sbjct: 198 LFRRTPGGATEFVVPAPPPNHGMAYSLPQSPQQFKQLLMVGGIDRYFQIARCYRDEGSKG 257

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
           DR P EF Q+D+EMSF  Q+ ++  +E+++   + E        + F RI Y +A+ +YG
Sbjct: 258 DRQP-EFTQVDVEMSFTTQEGVMQLIEDMILSAWPESLIHLKPKSPFPRISYSEAMTKYG 316

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
            DKPD+R    + +V          +F   L  N G ++  I  +G G         +EW
Sbjct: 317 IDKPDMRVSWQIEDVK-------TNIF-NFLKKNDGDKIRVIVCRGAGKTPISNSTKDEW 368

Query: 348 ARSQGQPGLAYIFWRLDESG-NVAGMGPVAK-HLNIVNTEAIRVRLDMQDGDSCFFIAGD 405
            R            +++E+G N A   P  K     +  E I     + + D+     G+
Sbjct: 369 KR----------LIQMNENGRNFAICHPSHKTWFKSLKNEKILEEFGLTEEDALVVCWGE 418

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
                      RN++A+  G+ + N     W++DFP + +  EE  +   H+PFT P   
Sbjct: 419 SDGVYWTLGQLRNYVAEICGLRSKNVVTAHWVVDFPLFSF--EEGHLVSTHHPFTAPVDK 476

Query: 466 MESLKGND----LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
            + +  ++    LL I    YDLV NG E+  G IR   SE+       +    E +E  
Sbjct: 477 DKEMLYDEDNDRLLQITGQHYDLVINGVEMGGGSIRIENSEMQRHVLKILSEPTEEME-- 534

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLLMGSPS 577
              L  A   G PPHGG A G+DR V +L    N    VR+V  FP ++N  DL+  +P+
Sbjct: 535 --HLLNALSHGAPPHGGFALGLDRFVAMLTSDGNPLTPVRDVIAFPKTKNGKDLMSDAPT 592

Query: 578 TVSVEQLR 585
           T+S +QL 
Sbjct: 593 TLSKKQLE 600


>gi|308190115|ref|YP_003923046.1| aspartate--tRNA ligase [Mycoplasma fermentans JER]
 gi|307624857|gb|ADN69162.1| aspartate--tRNA ligase [Mycoplasma fermentans JER]
          Length = 556

 Score =  418 bits (1075), Expect = e-114,   Method: Composition-based stats.
 Identities = 193/573 (33%), Positives = 291/573 (50%), Gaps = 30/573 (5%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   D G  V L GWV   R  G + F+D+RD YGITQ V   D         V  E  
Sbjct: 10  ELSAKDKGKKVTLHGWVANKRRFGEMTFIDLRDRYGITQCVFKTDLN-------VTKESS 62

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYR 129
           + I G V+ R  +  N N+ TG IE+   K  I S A EELP  +  + +  E  R KYR
Sbjct: 63  MEIIGKVVLR--KQKNPNLATGDIEVVVDKYTIFSEANEELPFAIRDDIDVKEETRMKYR 120

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           FLDLRR  + +NI+ + +I+ ++R  M   +FI+  TP+L  S+PEGARDFLVP+R N+ 
Sbjct: 121 FLDLRRPVMQQNIITKDKIMFAVREFMHQNDFIDIETPMLAKSTPEGARDFLVPTR-NRD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            F+ALPQ+PQ +KQLLM SGF++Y+Q A CFRDED R DR P EF QLD+E SF+  +D 
Sbjct: 180 EFWALPQSPQLFKQLLMCSGFEKYYQFARCFRDEDSRKDRQP-EFTQLDIETSFLNVEDF 238

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
              +E + + +F+       +   F R+ Y DA+R YGTDKPDLR    + ++ +  +++
Sbjct: 239 QKYIEKLFKHIFKSIG--IKIKTPFPRVKYFDALRDYGTDKPDLRYDYKIVDINDFCLNT 296

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
           +F +     S    +    I        +     + E A+      L Y  +   E+G +
Sbjct: 297 DFNIIKDAPSKRMLFVDTLI-------TKKDFKDLEEIAKKNKANILFYFVY---ENGEI 346

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADARNHIAQELGIIN 428
                     N V   A+ +  + ++ +  +FI  +            R  + +      
Sbjct: 347 VHTN----FANKVKDAALELVKNNKNKNGSYFIVANTYDHASQALGAVRVELNERFNYAR 402

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              +   WI D+P +E++EE      AH+PFT     +E L   ++  ++A  YDLV NG
Sbjct: 403 KE-WNLSWITDWPMFEYDEENNTWAAAHHPFTRFAHSLEELDKIEMKDVRALSYDLVLNG 461

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           FE+ SG  R    +   + F  +G+S++  ++RF    +AF  G+PPH GI  G+ +I  
Sbjct: 462 FELGSGSARIFDKKTQKKMFDLIGMSEKEQQSRFDWFLKAFDYGIPPHCGIGLGLWQIDN 521

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
               +KN      FP +    D+  G+P +V  
Sbjct: 522 DYYRSKNNSWCYAFPKNAKNQDVFTGAPGSVDK 554


>gi|116515132|ref|YP_802761.1| AspS [Buchnera aphidicola str. Cc (Cinara cedri)]
 gi|116256986|gb|ABJ90668.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 571

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 182/576 (31%), Positives = 306/576 (53%), Gaps = 11/576 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-NPDSACFEIAK 63
           RT  CG++   D+   + + GWVH++R    IIF+DI+D  GI QV+     ++ F + K
Sbjct: 2   RTKYCGEIKKKDINKIITICGWVHKIRSLKNIIFIDIKDITGIIQVIFLKKYNSNFSLVK 61

Query: 64  SVRSEWVLCIDGLVMSRSAET-INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++R+++ + I GLV+ +   T  N        E+ A K++I + +  +  P   ++E  E
Sbjct: 62  TIRNDYCIKIKGLVILKKKLTYFNTQEKENFFEIIAFKLKIFNPSLPI--PFDYKKENKE 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            IRFK+R+LDLRR  +   +  R++I   +R   I + F+E  TPILT S+PEGA+D+LV
Sbjct: 120 DIRFKFRYLDLRRFYMFHKLQTRSKITTIIRNFFIKKKFLEIETPILTRSTPEGAKDYLV 179

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            SR+  G ++ALPQ+PQ +KQLLM SG DRYFQIA CFRDED RSDR P EF Q+D+E++
Sbjct: 180 YSRLYPGKYFALPQSPQLFKQLLMISGIDRYFQIAKCFRDEDLRSDRQP-EFTQIDIEIA 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F ++  +   +  +++ ++ + +N          I Y ++I +YGTDKPDLRNPI    +
Sbjct: 239 FKKKKFLQKLINKLIKKLWLKINNYTIKKIKN--ITYKESILKYGTDKPDLRNPIQFVEL 296

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD--RMNEWARSQGQPGLAYIF 360
            + F +   + F  +L +     + +I    G          +  ++          Y+ 
Sbjct: 297 YDIFNNFYKKFFPWLL-IKNINRIISIKIPEGIKKIRDNKIYKYKKFLEKLNFNYFIYVK 355

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               +   +     +   ++    +   ++    +GD  F IA       + +   R  I
Sbjct: 356 IINIKKYIIKDNRNIFSKIDKKTLKEFFLKTSAINGDIIFIIAEKYNIANNISNLLRKKI 415

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             +L I N       WI  FP ++ +++   +   H+PFT P+   ++++  + L I + 
Sbjct: 416 GIDLKITNLKKICPVWITKFPLFKLDKKNN-LKSVHHPFTSPEKNSKNIELLNPLKIISS 474

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +DLV NG+EI  G  R +  ++ ++ F+ + I+K   + +FG    + Q G PPH G+A
Sbjct: 475 AFDLVINGYEIGGGSERIYNYQLQIKIFNILKINKNKQKKKFGFFINSLQYGAPPHLGLA 534

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
            G+DR+VMLL     + +V  FP + +   L+ G+P
Sbjct: 535 LGLDRLVMLLTNCNTISDVIAFPKTNSAICLMTGAP 570


>gi|270006699|gb|EFA03147.1| hypothetical protein TcasGA2_TC013060 [Tribolium castaneum]
          Length = 549

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 166/562 (29%), Positives = 278/562 (49%), Gaps = 25/562 (4%)

Query: 38  FLDIRDHYGITQVVA-NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIEL 96
           F  +RD YG TQ++    D+   ++ +++  E ++ + G V+SR  +  N    TG IE+
Sbjct: 4   FAVLRDSYGATQLLVPEEDTKTQKLLQNLPFESIIQVKGTVLSRPTDMKNKKQPTGDIEI 63

Query: 97  SAQKIEILSVAEELPLPVF-GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155
             +   +L+ A++          +  E++R +YR+LDLR   + +N+  R+ ++  MR  
Sbjct: 64  FIEHFTVLNKAKDSLPFHIREHHKAKEALRMQYRYLDLRYPLMQRNLRVRSEMLMKMREF 123

Query: 156 MIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           ++  + F++  TP L  ++P GA++F+VP+R   G FY+L Q+PQQ+KQ+LMA   DRYF
Sbjct: 124 LVNHSGFVDVETPTLFKATPGGAQEFIVPTRF-PGQFYSLVQSPQQFKQMLMAGAVDRYF 182

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           QIA C+RDE  R DR P EF QLD+EMSF + D+IL  +E +L   +  F     +   F
Sbjct: 183 QIARCYRDEGARPDRQP-EFTQLDIEMSFTDLDNILQLVEELLGHAWPPFLGP--LPKKF 239

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
            R+ + +A+  YG+D+PD R    + N TE    +E  +     S + G      P +  
Sbjct: 240 QRMGFGEAMELYGSDQPDTRFGFKLENCTELLKLNEKFI----NSDDFGAYCIVFPKEYA 295

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
             N+   + + + ++    P + ++  ++   G +A    + K L       +   +   
Sbjct: 296 NLNKGVKENLEKISKQF--PLVKFVQTKVATPGELAPK--LGKLLGDNVAAKLANHV--S 349

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGI----INCNCFEFCWIMDFPFYEWNEEEK 450
           D    F   G+  +  S     R   A  L      +        W++D P +E  E   
Sbjct: 350 DDCVLFLGFGNKKQTQSLMGKVRLEYANHLEQLGVSVRAKGMHLLWVVDMPLFEPGESPG 409

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
            +  AH+PFT P      L     L +++  +DLV NG EI  G +R H  ++  + F  
Sbjct: 410 SLQSAHHPFTAPNPDDLLLLDTAPLQVRSLSFDLVLNGNEIGGGSVRIHDPDLQEKIFRM 469

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           + I K  ++     +      G PPHGGIA G+DR++  +L   ++R+V  FP +    D
Sbjct: 470 LNIDKNSMQ----HIIDMLSSGCPPHGGIALGLDRLMSKILNTASIRDVIAFPKTFEGRD 525

Query: 571 LLMGSPSTVSVEQLRELGLRIV 592
            L G+PS VS   L+   ++ V
Sbjct: 526 PLSGAPSAVSDADLKLYHVKSV 547


>gi|326910915|ref|NP_001192099.1| aspartyl-tRNA synthetase, mitochondrial [Acyrthosiphon pisum]
 gi|328698565|ref|XP_003240672.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Acyrthosiphon
           pisum]
          Length = 645

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 180/600 (30%), Positives = 297/600 (49%), Gaps = 35/600 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           ++  RTH+C  L   D G  V L GW+  VR +    F+ +RD YG TQ+V   +++   
Sbjct: 76  LYTSRTHTCDQLRNEDCGKSVILCGWLEYVRLNR---FIILRDGYGSTQLVIPENASTEL 132

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE- 117
            +  K +  E VL   G V  R    IN +  TG IE+   ++ +L+  +        + 
Sbjct: 133 NDFIKQIPLESVLMCYGSVKLRPVGEINKDQSTGMIEVIVDQLLLLNAVDTKLPFQLRKF 192

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEG 176
            +  ES+R KYR+LDLR   +  N+  R++++  MR  +I    F+E  TP L   +  G
Sbjct: 193 NKANESLRLKYRYLDLRYPEMQYNLRLRSKLLMKMREFLINHREFVEVETPTLFKKTHGG 252

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A++F+VP+   +G  Y+L Q+PQQ KQ+LM    DRYFQ+A C+RDE  +SDR P EF Q
Sbjct: 253 AQEFIVPTH-EKGKCYSLVQSPQQLKQMLMVGSMDRYFQVAKCYRDEGAKSDRQP-EFTQ 310

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LD+EMSF  QD ++  +E +L  V+   S    +   F R+ Y++A+  YG+DKPD+   
Sbjct: 311 LDIEMSFTNQDGVMLLIEELLSFVW--PSELGKIKIPFPRLSYEEAMVTYGSDKPDIGRS 368

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             + N T++  ++   VF+ +L                   +   + + +   S   P +
Sbjct: 369 TKISNWTKYIPNATNEVFALVLKNAE-----------DKLTKKQINDL-KILISTNYPDV 416

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +    +           + K +N ++  A+    ++ + D     +G   K  S     
Sbjct: 417 KFSLLNIRSV--ETFKENIKKIINGIDVAAMLAADNISEHDLVAIASGSKYKSLSVLGKI 474

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             H   ++   + + + F WI++FP +E +    +I   H+PFT PQ     +  ++LL 
Sbjct: 475 NEHF--KVDNSSDDRWRFVWIINFPLFEMD--SNQIQSVHHPFTQPQTE---ITSDNLLE 527

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +K F YDLV NG E+  G IR H + +  +   ++             L  A + G PPH
Sbjct: 528 VKGFHYDLVLNGSEVGGGSIRIHDANLQTKVIGSILNIPIET---MSHLVEALKSGCPPH 584

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           GGIA G+DR++ +L    ++R+V  FP +    DLL G+P+ ++ E ++   L+I    K
Sbjct: 585 GGIALGVDRLLSILCNTNSIRDVIAFPKTFEGKDLLSGAPTEITTEDMKRYHLKIDNIEK 644


>gi|296390678|ref|ZP_06880153.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 387

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 138/391 (35%), Positives = 208/391 (53%), Gaps = 6/391 (1%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           M +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF+++ DI+   E ++R +F+E  
Sbjct: 1   MVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSFLDESDIIGITEKMVRQLFKEVL 59

Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
           +       F  + +++A+RRYG+DKPDLR P+ + +V +     EF+VFS   +   G  
Sbjct: 60  DVEFDE--FPHMPFEEAMRRYGSDKPDLRIPLELVDVADQLKEVEFKVFSGPANDPKGRV 117

Query: 326 VWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE 385
                       R+  D   ++    G  GLAYI       G      P+ K +   N  
Sbjct: 118 AALRIPGAASMPRSQIDDYTKFVGIYGAKGLAYIKVNERAKGVEGLQSPIVKFIPEANLN 177

Query: 386 AIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEW 445
            I  R+   DGD  FF A      C      R  +  +L ++    +   W++DFP +E 
Sbjct: 178 VILDRVGAVDGDIVFFGADKAKIVCDALGALRIKVGHDLKLL-AREWAPMWVVDFPMFEQ 236

Query: 446 NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML 505
           N++   +   H+PFT P+     L+ N   +  +  YD+V NG E+  G IR H   +  
Sbjct: 237 NDD-GSLSALHHPFTSPKCTPAELEAN-PGAALSRAYDMVLNGTELGGGSIRIHDKSMQQ 294

Query: 506 QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             F  +GI +   E +FG L  A + G PPHGG+A G+DR+VML+ GA ++REV  FP +
Sbjct: 295 AVFRVLGIDEAEQEEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGASSIREVIAFPKT 354

Query: 566 QNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           Q+  D++  +P +V  + LREL +R+ E PK
Sbjct: 355 QSAGDVMTQAPGSVDGKALRELHIRLREQPK 385


>gi|170086982|ref|XP_001874714.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649914|gb|EDR14155.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 646

 Score =  412 bits (1058), Expect = e-112,   Method: Composition-based stats.
 Identities = 194/629 (30%), Positives = 305/629 (48%), Gaps = 59/629 (9%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACF 59
           +  RTH+CG L   D GS V L+GW+   R    I F  I+D +G TQ++ N   + A  
Sbjct: 32  YPKRTHNCGSLTARDAGSRVVLAGWILPERKGKAISFFPIKDSHGTTQLIVNHADNPASS 91

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGER 118
            I   +  E  + I+G V+ R +    ++  TG+I++   K+ +L+ A     LP     
Sbjct: 92  SIISEIPVESTVLIEGTVLLRPSNARRSD-PTGEIDVQVDKVTLLNPATNLPFLPSNPHN 150

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R ++R+LDLRR  L +NI KR+++ + +R  +    F E  TP+L  SSPEGAR
Sbjct: 151 LPNEDLRSRHRYLDLRRTALSENIKKRSQVAHLVRNILHTIGFTEVETPVLLRSSPEGAR 210

Query: 179 DFLVPSRVNQGS-------FYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRL 230
           +FLVP+R+N  S       FYAL Q+PQQ KQLL+ SG  D+YFQIA CFRDED R DR 
Sbjct: 211 EFLVPTRINTASPTSQEPLFYALQQSPQQPKQLLICSGGVDKYFQIAKCFRDEDGRKDRQ 270

Query: 231 PGEFYQLDMEMSFVEQD-------------DILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           P EF Q+D+EM+FV                ++ + +E +LR ++++F N          +
Sbjct: 271 P-EFTQIDLEMAFVSWSGDEKGTSWKIGGGEVRDVIETLLREIWQQFENVALPPRL-RVM 328

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP--AKGGG 335
            Y DA+  +G+DKPD R  + + ++T+          ++ LS         +    +   
Sbjct: 329 TYHDAMTHFGSDKPDTRFGLEITDLTDLLPA------NRALSRENEVIECIVVREPEFIK 382

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAK-HLNIVNTEAIRVRLDMQ 394
            + +F    +          + +I    +           A+  L+  +   +   L ++
Sbjct: 383 ASHSFKHDYD----------VEHITLTEENLQTWLLGSDSARQILSQEDQSIVNDALKIK 432

Query: 395 DGDSCFFIAGD--PLKFCSFAADARNHIAQ----ELGIINCNCFEFCWIMDFPFYEWNEE 448
            GD  +       P    +     R  +A+    +          F WI +FP +  ++ 
Sbjct: 433 SGDDVWLTRRSRLPKGGSTVLGKVRLGLAELAQSQGEFTPTKDPHFLWITEFPLFTRDDS 492

Query: 449 EK------KIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           +K      +   +H+PFT P      +L   D+ +++   YDLV NG EI  G +R H  
Sbjct: 493 DKDFLAKGRWSSSHHPFTAPMWEDIPTLYRGDIETVRGQHYDLVLNGVEIGGGSVRIHDP 552

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
            +    F+NV    E  +  F  L RA  CG PPHGGIA G DRI+ +L   +++R+V  
Sbjct: 553 LMQDHIFTNVLQLSENEKTPFNHLVRALHCGAPPHGGIALGFDRIMTMLCNTQSIRDVIA 612

Query: 562 FPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           FP +    DLL  SP+ V+ + L E G++
Sbjct: 613 FPKTSLGTDLLFKSPAPVTSQVLYEYGIQ 641


>gi|309354922|emb|CAP39658.2| CBR-DARS-2 protein [Caenorhabditis briggsae AF16]
          Length = 629

 Score =  410 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 190/611 (31%), Positives = 294/611 (48%), Gaps = 57/611 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+CG+L  S+    V + GW+   R      F  +RD YG  Q     +S    + K 
Sbjct: 23  RSHTCGELNASNKDEKVSVMGWLSHKRM---DRFFVLRDAYGSVQATIPENSELKRLLKD 79

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E ++ +D  V+    E  N  + TG IE+  +K+ +L+ A    LP+       E  
Sbjct: 80  LPYESIVRVD-GVVVDRGENRNKAMKTGDIEIGVKKLTVLNKAVS-NLPLLPGVNANERT 137

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLVP 183
           R KYR++DLR D L +++  R+  ++++R  ++ ++ F++  TP L   +P GA +F+VP
Sbjct: 138 RLKYRYIDLRSDKLQRSLRIRSEFVHNLRKFLVEKSGFVDVETPTLFRRTPGGATEFVVP 197

Query: 184 -SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ---------------IAPCFRDEDPRS 227
               N G  Y+LPQ+PQQ+KQLLM    DRYFQ               IA C+RDE  + 
Sbjct: 198 APSPNHGMAYSLPQSPQQFKQLLMVGAIDRYFQVFLNGETEKKTLIFQIARCYRDEGSKG 257

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
           DR P EF Q+D+EMSF  Q+ ++  +E+++   + E  N     + F RI Y  A+ +YG
Sbjct: 258 DRQP-EFTQVDVEMSFTTQEGVMQLIEDMVISAWPESLNHIKPKSPFPRISYSGAMAKYG 316

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNE 346
            DKPD+R P  + +V          +F+ +   +   +    I  +G G         NE
Sbjct: 317 IDKPDMRIPWEIEDVK-------SGIFNFLKKNDCENWRARVIVCRGTGKTSISNSIKNE 369

Query: 347 WARSQGQPGLAYIFWRLDESG-NVAGMGPVAK-HLNIVNTEAIRVRLDMQDGDSCFFIAG 404
           W R            +++E+G N A   P  K     V  + I     + + D      G
Sbjct: 370 WKR----------LIQMNENGRNFAICHPSQKSWFKSVENQKIVDEFVLTEDDVLIVCWG 419

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP-Q 463
                       RN++A+  G+ +       W++DFP + +  EE ++   H+PFT P +
Sbjct: 420 HSDGVYWTLGQLRNYVAEVCGLRSEGGVTAHWVVDFPLFSF--EEGQLVSTHHPFTAPVE 477

Query: 464 GGMESLKGND---LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
              E L  +D   LL I    YDLV NG E+  G +R   SE+       +G   E +E 
Sbjct: 478 KDKEMLFESDNQKLLQITGQHYDLVMNGVEMGGGSVRIENSEIQRHVLKVLGEPTEEME- 536

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLLMGSP 576
               L  A   G PPHGG A G+DR V +L    N    VR+V  FP ++N  DL+  +P
Sbjct: 537 ---HLLNALSYGAPPHGGFALGLDRFVAMLASDGNPLTPVRDVIAFPKTKNGKDLMSDAP 593

Query: 577 STVSVEQLREL 587
           +T+S +QL+ L
Sbjct: 594 TTLSQKQLQRL 604


>gi|114565516|ref|XP_001150083.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 4
           [Pan troglodytes]
          Length = 586

 Score =  409 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 154/601 (25%), Positives = 266/601 (44%), Gaps = 84/601 (13%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++                 
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDI---------------- 210

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                          + P  +K                          R PG    +D+E
Sbjct: 211 ---------------ETPTLFK--------------------------RTPG----IDIE 225

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  + + 
Sbjct: 226 MSFVDQTGIQSLIEGLLQYSW--PNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMKII 283

Query: 301 NVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F ++E       LS      +   IP       R   + + ++A       +  +
Sbjct: 284 DISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQEILPV 343

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F   + + N     PVA  +       +   ++ Q+ D     AG+  K CS     R  
Sbjct: 344 FLNANRNWN----SPVANFIMESQRLELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLE 399

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE  + ++ AH+PFT P      L   +
Sbjct: 400 CADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTE 459

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
               ++  YDLV NG EI  G IR H +E+     + +      +      L +A   G 
Sbjct: 460 PKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLKEDVKM---LSHLLQALDYGA 516

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPHGGIA G+DR++ L+ G++++R+V  FP S    DL+  +P +V  E+L+   +R+ +
Sbjct: 517 PPHGGIALGLDRLICLVTGSRSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRVSK 576

Query: 594 N 594
            
Sbjct: 577 P 577


>gi|330844656|ref|XP_003294234.1| hypothetical protein DICPUDRAFT_159202 [Dictyostelium purpureum]
 gi|325075342|gb|EGC29242.1| hypothetical protein DICPUDRAFT_159202 [Dictyostelium purpureum]
          Length = 1269

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 178/584 (30%), Positives = 277/584 (47%), Gaps = 65/584 (11%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----- 58
            R+++CGDL  +D+G  V + GW++  R  G  +F+ IRD +G  QV+ N + +      
Sbjct: 73  KRSNTCGDLNKNDIGKEVLIYGWINSFRKFGDQVFMVIRDGHGKVQVIINLNESNSNSKN 132

Query: 59  ---------------------FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
                                 E  K  + E ++ I G V+ R  + IN  + TG+IE+ 
Sbjct: 133 IIKTILKSSVPNIDIDSNKSIEENIKLFKLESIVSIRGKVIGRPDDMINQKMKTGEIEIE 192

Query: 98  AQKIEILS-VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM 156
           A +I++L+  A+             E +R  YR++DLRRD +  NI  R+R+  + R  +
Sbjct: 193 ASEIQLLNNCADLPFTVEHDGVLASEELRLTYRYVDLRRDQVQSNIRLRSRLSMAARNYL 252

Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216
           + ++FIE  TP L   +PEGAR++LVP+R N G FY+LPQ+PQQYKQLLM  G DRYFQ+
Sbjct: 253 VGQDFIEVETPTLFRPTPEGAREYLVPTR-NHGQFYSLPQSPQQYKQLLMVGGVDRYFQL 311

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           A C+RDED RSDR P EF Q+DME+SFV  + I   +E +L+ +++E   G  +   F  
Sbjct: 312 ARCYRDEDLRSDRQP-EFTQIDMELSFVNCEMIYTIIEGLLKKLWKE--AGFNIDYKFPF 368

Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
             Y+  + RYG DKPD R  +   +             +      P  +   +       
Sbjct: 369 YTYEQVLSRYGIDKPDTRYALAEPS-------------NSFKESKPMIKCIKLSKVLPTL 415

Query: 337 NRAFCDRM---NEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
           +++  +++   +++   +   G+  +     +         ++K L+    + +  R+D+
Sbjct: 416 SKSELEQLVNDSKFLVKEAPHGVVSVAINKKDG---EWKSRISKFLSEKEKQQLVERMDI 472

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGI-----INCNCFEFCWIMDFPFYEWN-- 446
           +DGD     AG      S     R   AQ L       I+   F F W++DFP +     
Sbjct: 473 EDGDVLLIAAGPRCNVESLLGKVRIQSAQLLKKKKLLEIDDKQFNFLWVVDFPLFTPESY 532

Query: 447 -EEEKKIDFAHNPFTMPQGGMESLK------GNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
             E   +   H+PFT P      +        +D   I+   YD+V NG E+  G IR H
Sbjct: 533 LNENSPLLSTHHPFTAPHPEDIDILLNENSKPSDYSKIRGLHYDIVLNGVEMGGGSIRIH 592

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
             +V L+    V      + NRF  L  A   G PPHG    G+
Sbjct: 593 NQDVQLKVLEKVLRLPPHLSNRFSHLINALAMGCPPHGDW-FGL 635


>gi|213408891|ref|XP_002175216.1| aspartyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212003263|gb|EEB08923.1| aspartyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 591

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 179/605 (29%), Positives = 272/605 (44%), Gaps = 45/605 (7%)

Query: 14  VSDVGSFVRLSGWVHR--VRPHGGIIFLDIRDHYG--ITQVVANPDSACFEIAKS----- 64
              +G  V   GW+     R      F+ +R   G  I  +   P       AK+     
Sbjct: 5   KKLIGRTVEFHGWLVSASRRISKNTKFMQLRQPGGELIQLIDKRPPEQRAGDAKTNCSPT 64

Query: 65  --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             + +E V+ + GLV  R  +         + E+  Q IE+L+ A+        +     
Sbjct: 65  GNLPAESVVRVRGLVCKRPLKDQRPG---QECEVEVQDIELLNAADSPLPFNPLQPPSNI 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
               ++R L LR   + KN+  R+ +   +        F E  TP+L  S+PEGAR+FLV
Sbjct: 122 LTCLRHRHLYLRSPLMQKNLRLRSELSYQIHSFFHEHEFCEVETPLLFKSTPEGAREFLV 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR + G FYAL Q+PQQ KQ LMASGF RY+Q A CFRDED R+DR   EF Q+DMEM+
Sbjct: 182 PSRHDPGCFYALTQSPQQIKQTLMASGFHRYYQFARCFRDEDLRADRQI-EFTQIDMEMA 240

Query: 243 FV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           FV  ++ +++ +E ++R +++        S  F R+ Y +A+ RYGTDKPDLR+      
Sbjct: 241 FVYNREQVMSVVEALIRFLWKRVLGLELKS--FPRLTYKEALARYGTDKPDLRHDTSFKC 298

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           + E    +        L  +   E + +   G   + +FC  +    +   +  L YI  
Sbjct: 299 LNEILQLN--------LQNDVLIEAFLVKQGGHHLSESFCKTL----KHNSKQKLNYIHV 346

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK--FCSFAADA--- 416
           + +   +          L    T  +   L ++ GD  F  +         +   +    
Sbjct: 347 KNENIMHSWSQQLPETKLMPHETTRLNEFLGLEVGDIIFVSSRPSHSPFAMTALGEVYPL 406

Query: 417 ------RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESL 469
                    +A +L     + F F WI+DFP    +          H+PFT P      L
Sbjct: 407 VHKALTEMKVAPKLN---EHEFAFTWIVDFPLVTPDASNPNAWKATHHPFTAPHPEDIHL 463

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
             N+ L  +A  YDLV NG E+  G IR H  +   +   +V    +     F  L+   
Sbjct: 464 LQNNPLDARALSYDLVVNGIELGGGSIRIHDYQQQYEILRDVLKLTDTEIRSFEHLFTIL 523

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + G PPHGG A G DR+V L+ G +++R+V  FP + +  DLL  SP  VS  QL E  L
Sbjct: 524 RSGCPPHGGFALGYDRLVALMAGCRDIRDVIAFPKTASGKDLLFQSPGPVSSSQLTEYKL 583

Query: 590 RIVEN 594
           ++  +
Sbjct: 584 QLQPS 588


>gi|134117039|ref|XP_772746.1| hypothetical protein CNBK1200 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255364|gb|EAL18099.1| hypothetical protein CNBK1200 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 693

 Score =  407 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 181/638 (28%), Positives = 290/638 (45%), Gaps = 61/638 (9%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHR-VRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63
           TH   DL  S V   V ++GW+    R    + F  +R     + V   + D    +   
Sbjct: 70  THDIADLSPSLVDQKVVIAGWLFSQRRASDNLHFFTLRSPSSSSAVQLVSRDKDVSKDVM 129

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY-PE 122
               E V+ + G V +R  +    +    +IEL  Q + +L+ A++         E   E
Sbjct: 130 EYPLESVVLVQGTVKARRQKAKAISSAVDEIELEVQGVTLLNPADQTLPFYPNRPEVANE 189

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R ++R+LDLRR  L  N+  R+++ + +R  +  + F E  TPIL  SSPEGAR+FLV
Sbjct: 190 DLRAQHRYLDLRRQDLADNLKTRSKVAHIIRNYLHDQGFTEIETPILLNSSPEGAREFLV 249

Query: 183 PSRV-----NQGSFYALPQAPQQYKQLLMASG-FDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           P+R       Q +FYALPQ+PQQ KQLL++SG   +Y+QIA CFRDED R DR P EF Q
Sbjct: 250 PTRSPTPEGGQPTFYALPQSPQQPKQLLVSSGAIPKYYQIAKCFRDEDGRRDRQP-EFTQ 308

Query: 237 LDMEMSFVEQ-------------------DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           +D+EM FV                      ++ + +E +++ +++E    + +   F  +
Sbjct: 309 IDLEMGFVSGAAEPPKGEGEMRSTWAIGGQEVRDVVEGMIKKIWKEVKGVD-LEGWFRVM 367

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG- 336
            Y+ A+  YG+DKPD R  +    +  +   S+  +   +L  NP    W +        
Sbjct: 368 PYEVAMDVYGSDKPDTRFDMYTLPIGYYPTLSDDSLDKVLLDQNPYTVEWMVTPAAQAAG 427

Query: 337 ----NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
               + A  +   ++ +       +++       G       +   L+        +   
Sbjct: 428 LDIPSIAGNNSFIDYVKITNANTHSWL-------GESVLTASLGLSLDK------SLPGG 474

Query: 393 MQDGDSCFFIAGDPLK--FCSFAADARNHIAQEL---GIIN-CNCFEFCWIMDFPFYEWN 446
           +  GD  +      +     +     R  + + L   G++       F WI  FP +   
Sbjct: 475 VNPGDVIWLSRRKKIAEGGWTHLGRLRVQLMEALVAKGLMTLPTQPHFLWITQFPLFTLA 534

Query: 447 EEEK------KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           +E+K      +    H+PFT P    +  LK   +  ++   YDLV +G EI  G +R H
Sbjct: 535 DEDKIHLSRGRYSSTHHPFTAPMYEDLADLKAGKIDGVRGQHYDLVLDGQEIGGGSVRIH 594

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
            + +       V    E    RF  L RA +CG PPHGG+A G DR+V +L GAK++R+V
Sbjct: 595 DARLQEWVMKEVLQLDEQEMGRFDHLLRALKCGAPPHGGLALGFDRLVAILCGAKSIRDV 654

Query: 560 SLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
             FP S    D +  SPS    E L+E GL+ ++  +K
Sbjct: 655 IAFPKSTTGQDPVFKSPSVSGNEVLKEYGLQSLKREEK 692


>gi|58260596|ref|XP_567708.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57229789|gb|AAW46191.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 693

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 181/638 (28%), Positives = 289/638 (45%), Gaps = 61/638 (9%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHR-VRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63
           TH   DL  S V   V ++GW+    R    + F  +R     + V   + D    +   
Sbjct: 70  THDIADLSPSLVDQKVVIAGWLFSQRRASDNLHFFTLRSPSSSSAVQLVSRDKNVSKDVM 129

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY-PE 122
               E V+ + G V +R  +    +    +IEL  Q + +L+ A++         E   E
Sbjct: 130 EYPLESVVLVQGTVKARRQKAKAISSAVDEIELEVQGVTLLNPADQTLPFYPNRPEVANE 189

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R ++R+LDLRR  L  N+  R+++ + +R  +  + F E  TPIL  SSPEGAR+FLV
Sbjct: 190 DLRAQHRYLDLRRQDLADNLKTRSKVAHIIRNYLHDQGFTEIETPILLNSSPEGAREFLV 249

Query: 183 PSRV-----NQGSFYALPQAPQQYKQLLMASG-FDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           P+R       Q +FYALPQ+PQQ KQLL++SG   +Y+QIA CFRDED R DR P EF Q
Sbjct: 250 PTRSPTPEGGQPTFYALPQSPQQPKQLLVSSGAIPKYYQIAKCFRDEDGRRDRQP-EFTQ 308

Query: 237 LDMEMSFVEQ-------------------DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           +D+EM FV                      ++   +E +++ +++E    + +   F  +
Sbjct: 309 IDLEMGFVSGAAEQPKGEGEMRSTWAIGGQEVREVVEGMIKKIWKEVKGVD-LEGWFRVM 367

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG- 336
            Y+ A+  YG+DKPD R  +    +  +   S+  +   +L  NP    W +        
Sbjct: 368 PYEVAMDVYGSDKPDTRFDMYTLPIGYYPTLSDDSLDKVLLDQNPYTVEWMVTPAAQAAG 427

Query: 337 ----NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
               + A  +   ++ +       +++       G       +   L+        +   
Sbjct: 428 LDIPSIAGNNSFIDYVKITSANTHSWL-------GESVLTASLGLSLDK------SLPGG 474

Query: 393 MQDGDSCFFIAGDPLK--FCSFAADARNHIAQEL---GIIN-CNCFEFCWIMDFPFYEWN 446
           +  GD  +      +     +     R  + + L   G++       F WI  FP +   
Sbjct: 475 VNPGDVIWLSRRKKIAEGGWTHLGRLRVQLMEALVAKGLMTLPTQPHFLWITQFPLFTLA 534

Query: 447 EEEK------KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           +E+K      +    H+PFT P    +  LK   +  ++   YDLV +G EI  G +R H
Sbjct: 535 DEDKIHLSRGRYSSTHHPFTAPMYEDLADLKAGKIDGVRGQHYDLVLDGQEIGGGSVRIH 594

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
            + +       V    E    RF  L RA +CG PPHGG+A G DR+V +L GAK++R+V
Sbjct: 595 DARLQEWVMKEVLQLDEQEMGRFDHLLRALKCGAPPHGGLALGFDRLVAILCGAKSIRDV 654

Query: 560 SLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
             FP S    D +  SPS    E L+E GL+ ++  +K
Sbjct: 655 IAFPKSTTGQDPVFKSPSVSGNEVLKEYGLQSLKREEK 692


>gi|300176712|emb|CBK24377.2| Aspartyl-tRNA synthetase [Blastocystis hominis]
          Length = 680

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 188/607 (30%), Positives = 301/607 (49%), Gaps = 48/607 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+ SC  L   ++  FV LSGWV  VR     +F+ +RD  G TQ + + D     + K 
Sbjct: 41  RSCSCNSLTKKNINEFVTLSGWVDSVRIMKDSVFIILRDGEGQTQTLFDCDKEVESLLKK 100

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E V+C++G V++R ++ INA + TG+IE+  +K+ +L+ A +LP P  G+    E +
Sbjct: 101 IPMESVVCVEGNVIARPSDAINARMNTGEIEVKGKKLYLLNQAVDLPFPYHGKLPKDEVL 160

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
             KYR L LR       I  R+  ++S+R  + + +F E  TP+LT SSPEGA +F VPS
Sbjct: 161 S-KYRHLTLRHPEYQNEIRFRSEFLHSLRLSLHSHHFTEVETPLLTRSSPEGAHEFYVPS 219

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
            +     +AL Q+PQQYKQ+LMASG DRYFQIA CFR+E  R DR   EF QLD+EM+++
Sbjct: 220 ALIPRGGFALSQSPQQYKQILMASGIDRYFQIARCFRNESGRKDRQL-EFTQLDIEMAYI 278

Query: 245 -EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            +  +I +T++N+L   F+  + G +   +F  + YD  +  +G+DKPDLR P  + +++
Sbjct: 279 TDLSEIQSTIQNLLLSTFQ--TAGISNPVSFRSLSYDACLSEFGSDKPDLRIPFRITSIS 336

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +         F ++  +    ++  +      G               G   L      +
Sbjct: 337 DDLQKIRVLRFPRLAPLVSASKLKQLLKSLEEGQ-----FQKSRVIRVGASKL------V 385

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           D     + +  +  +  I+     R   +  +G           +  S     R  +  E
Sbjct: 386 DVEKIQSQLSGLQNNELILVGVERRENEENANG----------YQIESLLGLLRTKLY-E 434

Query: 424 LG-----------IINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-----GM 466
           LG           + +     EF W+ +FP +E++ ++ +I   H+PFT P        M
Sbjct: 435 LGQQGKIYAPFPALTDSKVPIEFLWVENFPLFEFD-QQGRIKSTHHPFTSPLELISANSM 493

Query: 467 ESLKGN-DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
             LK       +K+   DLV NG E+  G +R H  ++         + K    + F  L
Sbjct: 494 RELKDPAKWTRLKSKSCDLVLNGNEVGGGSLRIHDFDLQK--TILTDVLKISSPDVFHHL 551

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             A + G PPHGG A G+DR++ LL G  ++R+V  FP S    D L  +P+ +S  Q +
Sbjct: 552 LNALKQGCPPHGGFAIGLDRLLSLLRGKASIRDVIAFPKSITGSDPLTSAPTAISDSQWK 611

Query: 586 ELGLRIV 592
           E+G+ +V
Sbjct: 612 EVGMFLV 618


>gi|330936724|gb|EGH40909.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 379

 Score =  405 bits (1041), Expect = e-110,   Method: Composition-based stats.
 Identities = 135/383 (35%), Positives = 205/383 (53%), Gaps = 6/383 (1%)

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +QIA CFRDED R+DR P EF Q+D+E SF+ ++DI+   E ++R +F+E  +      +
Sbjct: 1   YQIAKCFRDEDLRADRQP-EFTQIDIETSFLNEEDIIGLTEKMVRQLFKEVLDLEF--GD 57

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           F  + +++A+RRYG+DKPDLRNP+ + +V +     EF+VFS   +   G          
Sbjct: 58  FPHMTFEEAMRRYGSDKPDLRNPLELVDVADQLTGVEFKVFSGPANDPKGRVAALRVPGA 117

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
               R+  D   ++    G  GLAYI       G      P+ K +   N   I  R+  
Sbjct: 118 ASMARSQIDDYTKFVSIYGAKGLAYIKVNERAKGPEGLQSPIVKFIPEDNLNVILDRVGA 177

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            DGD  FF A             R  I  +L +  C  +   W++DFP +E N++     
Sbjct: 178 ADGDIVFFGADKFKIVSEALGALRIKIGNDLKLHTCE-WAPMWVVDFPMFEENDD-GSFT 235

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
             H+PFT P+   E L+ N   +  +  YD+V NG E+  G IR H  E+    F  +GI
Sbjct: 236 ALHHPFTAPKCTPEELEAN-PATALSRAYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGI 294

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLM 573
           +++  + +FG L  A + G PPHGG+A G+DR+VML+ GA+++REV  FP +Q+  D++ 
Sbjct: 295 AEDEQQEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAADVMT 354

Query: 574 GSPSTVSVEQLRELGLRIVENPK 596
            +P  V  + LREL +R+ E PK
Sbjct: 355 QAPGVVDAKALRELHIRLREQPK 377


>gi|260810833|ref|XP_002600127.1| hypothetical protein BRAFLDRAFT_204226 [Branchiostoma floridae]
 gi|229285413|gb|EEN56139.1| hypothetical protein BRAFLDRAFT_204226 [Branchiostoma floridae]
          Length = 519

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 175/520 (33%), Positives = 275/520 (52%), Gaps = 25/520 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+CG+L     G  V L GWV   R     +F+ +RD YG+ Q+V   D    ++ ++
Sbjct: 8   RSHTCGELRAVHAGEDVTLCGWVQFQRKQ---LFVTLRDSYGVIQLVLPQDKKHADMKQT 64

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +     E V+C+ G+V  R     N  + TG +E++  K+E+++ ++ LP  +    +  
Sbjct: 65  LAHLPPESVVCVQGIVQLRPIGEANKAMSTGDVEVAVSKVEMVNKSKSLPFQIRDFFQVN 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRC---RMIAEN-FIECSTPILTASSPEGA 177
           E +R K+R+LDLR   L  N+  R+++I  MR     + ++  F++  TP L   +P GA
Sbjct: 125 EHLRLKHRYLDLRGSQLQHNLRLRSQVIMKMREVNKHLSSQFRFVDVETPTLFRRTPGGA 184

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R+F+VPSR  +G F+ LPQ+PQQ+KQLLM  G DRYFQIA C+RDED R DR P EF Q+
Sbjct: 185 REFVVPSR-EKGKFFCLPQSPQQFKQLLMVGGVDRYFQIAKCYRDEDLRQDRQP-EFTQV 242

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSFV+Q  +   +E +L+  + +      ++  F R+ Y DA+++YG+DKPD R  +
Sbjct: 243 DIEMSFVDQRGVEQLIEELLQHAWPD--GKGALTLPFPRMQYKDAMKKYGSDKPDTRFGM 300

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD--RMNEWARSQGQPG 355
            +++V++    S   VF ++L  N G  + AI AK    +    D  ++ + A+     G
Sbjct: 301 KLNDVSDIMRSSGVTVFERLLKDNSGNTIQAINAKQAAPHMKNKDIEKLQDLAKQMMSKG 360

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L+ +             G +AKH++     A+   L  ++GD      G+ LK C     
Sbjct: 361 LSILQILPGG----EMKGAMAKHISSPCRNALLQELQAEEGDMLLLAGGEHLKTCELLGR 416

Query: 416 ARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
            R   A  L      + + + F F WI DFP +   E+   ++ AH+PFT P      L 
Sbjct: 417 IRVECADILETQGVQLRDPDVFNFLWITDFPLFVPKEDGSGLESAHHPFTAPHPDDLDLV 476

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
            +    +++  YDLV NG EIA G IR H +EV       
Sbjct: 477 YSHPHKVRSQHYDLVLNGNEIAGGSIRIHDAEVQRYILEE 516


>gi|307195778|gb|EFN77592.1| Aspartyl-tRNA synthetase, mitochondrial [Harpegnathos saltator]
          Length = 557

 Score =  404 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 186/569 (32%), Positives = 272/569 (47%), Gaps = 24/569 (4%)

Query: 33  HGGIIFLDIRDHYGITQVVANPD-SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT 91
            G   F+ +RD YG TQ++   D     E  + +  E VL I G V SR     N  + T
Sbjct: 1   MGK--FIILRDSYGSTQLLIPEDRKDLMETMRDIPYESVLSITGKVASRPEGLENKKMKT 58

Query: 92  GQIELSAQKIEILSVAEELPLPVF-GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIIN 150
           G IE+  + + IL+VA            +  E  + KYR+L LR   L +N+  R++ I 
Sbjct: 59  GDIEVHIESLVILNVASRNLPIFIRDYNKATEVQQMKYRYLSLRYSELQRNLRMRSQFIM 118

Query: 151 SMRCRMIAEN-FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
            MR  +I E  F++  TP L   +P GA++F+VP+R   G FY+L Q+PQQ+KQLLM   
Sbjct: 119 KMREFLINECNFVDIETPTLFKYTPGGAQEFIVPTR-QPGKFYSLVQSPQQFKQLLMVGS 177

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
           FDRYFQ+A C+RDE  R DR P EF QLD+EMSFV+Q+ ++N +EN+L   + E      
Sbjct: 178 FDRYFQVARCYRDETARHDRQP-EFTQLDIEMSFVDQNGVINLVENLLVYSWPEELGS-- 234

Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
           +   F  I Y DA+  YGT++PDLR P  + N+T     +  +   ++  V         
Sbjct: 235 IEIPFKHITYKDAMELYGTEQPDLRIPYQIRNLTHLVDSTILQETMRLQDVEQKVFALVF 294

Query: 330 PAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV 389
             K     ++  D++++                 + SG       + K  +   TE I  
Sbjct: 295 SNKSKWLTKSVRDKLSKIRDDYFTTTKLVALKIENNSG----RAQLEKIFSKNITENIVQ 350

Query: 390 RLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG----IINCNCFEFCWIMDFPFYEW 445
              +Q+ D      G            R      L      I  +  +F W+ DFP + +
Sbjct: 351 FCKLQEEDVILLAVGHYDDALKLLGKLRVEFTNLLEAQGEQIRSSKTKFLWVTDFPLFTF 410

Query: 446 NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML 505
            E   K++  H+PFT P         ND L ++   YDLV NG EIA G IR H + +  
Sbjct: 411 KE---KLESTHHPFTQPHLDDIGYLANDPLKVRGLHYDLVMNGSEIAGGSIRIHDANLQR 467

Query: 506 QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           Q  + + I     E     +  A   G PPHGGIA G+DR+V +L  AKN++ V  FP S
Sbjct: 468 QILNLLNID----ETNLSHMLEALTYGAPPHGGIALGLDRLVCMLCNAKNIKSVIAFPKS 523

Query: 566 QNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
               DL+ G+P  +S +      ++ VE 
Sbjct: 524 IEGQDLMAGAPDVISDDLKTLYHIQTVEK 552


>gi|167519184|ref|XP_001743932.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777894|gb|EDQ91510.1| predicted protein [Monosiga brevicollis MX1]
          Length = 624

 Score =  402 bits (1032), Expect = e-109,   Method: Composition-based stats.
 Identities = 183/611 (29%), Positives = 279/611 (45%), Gaps = 54/611 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIA 62
           YRTH CGDL    V   VR++GWV  +R  G  ++F+ +RD  G  +V          + 
Sbjct: 43  YRTHMCGDLTK-HVKQQVRVAGWVEAIRKAGDDLLFVTLRDATG--RVQVKATGPDMHLL 99

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV--------AEELPLPV 114
                E V  I+G V  R      +     Q  L    +EI S         A     P 
Sbjct: 100 AKTSIESVFAIEGEVCVRPDSARRSTHHDQQSSLELTDLEICSKRAEELSRAASLPFRPA 159

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
               +  E  R ++R LDLRR  L   +  R ++    R  +    F+E  TP L   +P
Sbjct: 160 SLHDQPLEDTRLRHRPLDLRRAVLQDALRLRHKLSTRFRAALNDNGFLEVETPTLFKRTP 219

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
            GA +FLVP+++  G FYAL Q+PQQYKQ+LM  G DRY+Q A C+RDE  R DR P EF
Sbjct: 220 GGANEFLVPTQM-PGKFYALVQSPQQYKQMLMVGGIDRYYQFARCYRDEGGRMDRQP-EF 277

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            QLD+EM+F  Q +++  ME V++ V ++       +  F R+ + +A+ +YG+DKPD R
Sbjct: 278 TQLDLEMAFAGQAEVMELMEKVVKHVLQD---WIDTARPFERLTFHEAMSQYGSDKPDRR 334

Query: 295 NPIIMHNVTEH---FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
             +++ +VT       H  +   + +L          + ++G    RA      + A+  
Sbjct: 335 FDMLLQDVTPELLNCGHVGWIATAFVLFFCYSAMRSCLLSQGRPALRA------KHAQLD 388

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
            Q   A I  R D++  +               +     + M+ G       G       
Sbjct: 389 DQKDFAVIALRADQAQRI------------DALQQHARGMGMEVG----VGLGMQQSIQE 432

Query: 412 FAADARNHIA-----QELGIINCNCFEFCWIMDFPFYEWNE-EEKKIDFAHNPFTMPQGG 465
                R +IA      +L  ++    +  W+ DFP +E +E    +I   H+PFT P   
Sbjct: 433 QLGKLRLYIAQILAEHDLLKLDDEQLDIFWVYDFPMFEQHELNSSRIQACHHPFTAPHPD 492

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
             +    + + ++A  YDLV NG E+  G +R H +E+      +V      V   F  L
Sbjct: 493 DIAYLETEPMKVRAQHYDLVMNGVELGGGSVRIHDAELQRYIIDHVLQDDPKV---FEQL 549

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLL---LGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
            +A   G PPH GIA G DR+V++L    GA+++R+V  FP S    +L+  SPSTV+  
Sbjct: 550 LQALAYGAPPHAGIALGFDRLVLMLSRAAGARSLRDVMAFPKSFAGKELMSDSPSTVTAA 609

Query: 583 QLRELGLRIVE 593
            L    ++   
Sbjct: 610 DLDVYHIQTKS 620


>gi|321263797|ref|XP_003196616.1| mitochondrial aspartyl-tRNA synthetase; Msd1p [Cryptococcus gattii
           WM276]
 gi|317463093|gb|ADV24829.1| Mitochondrial aspartyl-tRNA synthetase, putative; Msd1p
           [Cryptococcus gattii WM276]
          Length = 694

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 182/635 (28%), Positives = 291/635 (45%), Gaps = 55/635 (8%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHR-VRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAK 63
           TH   DL  S V   V ++GW+    R    + F  +R     + V   +          
Sbjct: 70  THDIADLSPSLVDQKVVIAGWLFSQRRASDNLHFFTLRSPSSSSAVQLVSRAKDVSSDMM 129

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY-PE 122
               E V+   G V +R  +   A+    +IEL  Q + +L+ A++         E   E
Sbjct: 130 EYPLESVVLAQGTVRARKQKAKTASSAIDEIELEVQGVTLLNPADQTLPFYPNRPEVANE 189

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R ++R+LDLRR  L  N+  R ++ + +R  +  + F E  TPIL  SSPEGAR+FLV
Sbjct: 190 DLRAQHRYLDLRRQDLANNLQTRGKVAHIIRNYLYDQGFTEIETPILLNSSPEGAREFLV 249

Query: 183 PSRV-----NQGSFYALPQAPQQYKQLLMASG-FDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           P+R       Q +FYALPQ+PQQ KQLL++SG   +Y+QIA CFRDED R DR P EF Q
Sbjct: 250 PTRSPSSEGGQPTFYALPQSPQQPKQLLISSGAIPKYYQIAKCFRDEDGRKDRQP-EFTQ 308

Query: 237 LDMEMSFVEQ-------------------DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           +D+EM FV                      ++   +E +++ +++E    + +   F  +
Sbjct: 309 IDLEMGFVSGAAEQPKGEGQMRSTWAIGGQEVREVVEGMIKKIWKEVKGVD-LEGWFRVM 367

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI--PAKGGG 335
            Y+ A+  YG+DKPD R  +    +  +   S+  +   +L  +P    W +   A+  G
Sbjct: 368 PYEVAMDVYGSDKPDTRFEMYTLPIGYYPTLSDNSLDKVLLDQSPYTVEWMVTPAAQAAG 427

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
            + +     + +            + ++  +   + +G      ++  +    +   +  
Sbjct: 428 LDISSIAASSSFVD----------YVKITNANTHSWLGESVLTASLGLSLDKSLPGGVNP 477

Query: 396 GDSCFFIAGDPLK--FCSFAADARNHIAQEL---GIIN-CNCFEFCWIMDFPFYEWNEEE 449
           GD  +      +     +     R  + +EL   G++       F WI  FP +   +E+
Sbjct: 478 GDVVWLSRRKKIAEGGWTHLGRLRVRLMEELVAKGLMTLPTQPHFLWITQFPLFTLADED 537

Query: 450 K------KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           K      +    H+PFT P    +  LK   +  ++   YDLV +G EI  G +R H  +
Sbjct: 538 KIHLSRGRYSSTHHPFTAPMYEDLADLKAGKVDGVRGQHYDLVLDGQEIGGGSVRIHDVK 597

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +       V    E   +RF  L RA +CG PPHGG+A G DR+V +L GAK++REV  F
Sbjct: 598 LQEWVMKEVLQLDEQEMSRFDHLLRALKCGAPPHGGLALGFDRLVAILCGAKSIREVIAF 657

Query: 563 PMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           P S    D +  SPS    E L+E GL+ ++   K
Sbjct: 658 PKSTTGQDPVFKSPSVSGDEVLKEYGLQSLKREDK 692


>gi|19075277|ref|NP_587777.1| mitochondrial aspartate-tRNA ligase [Schizosaccharomyces pombe
           972h-]
 gi|74582821|sp|O94242|SYDM_SCHPO RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; Flags:
           Precursor
 gi|3845470|emb|CAA19270.1| mitochondrial aspartate-tRNA ligase [Schizosaccharomyces pombe]
          Length = 611

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 185/606 (30%), Positives = 285/606 (47%), Gaps = 37/606 (6%)

Query: 17  VGSFVRLSGW-VHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFE-------------- 60
           VG+ V + GW V   R     I F  +RD +G    + + D    +              
Sbjct: 14  VGTKVSIQGWLVATSRQVSKSISFHQLRDTHGTILQLLSTDKIILQQKREPLVSSTDFSQ 73

Query: 61  --------IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
                      S+  E V+ + G +  R     +      + EL  + +++L+VA+ L L
Sbjct: 74  QKSTSVMRTLSSIPPESVVQVTGKLQRRPE---HDRRPGNEFELHVEDVKLLNVAKNLQL 130

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
              G+ +    I+   R + LR    +  + +R+R+   +        F E  TP+L  S
Sbjct: 131 FP-GDEKPGMRIQLANRHIQLRAPKYNSYLRQRSRLAYQVHSFFNDREFCEVETPLLFKS 189

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           +PEGAR+F+VPSR+N G FYALPQ+PQQYKQ+LMASG   Y+QIA CFRDED R DR P 
Sbjct: 190 TPEGAREFVVPSRLNPGKFYALPQSPQQYKQILMASGIGNYYQIARCFRDEDLRFDRQP- 248

Query: 233 EFYQLDMEMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           EF Q+D+EMSFV+   +I+  +E++L  +   F+ G T++  F  I Y  AI +YG+DKP
Sbjct: 249 EFTQIDLEMSFVDKPHEIMEVVEDLLVRLVS-FAKGITLAKPFQHITYQHAIDKYGSDKP 307

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           D+R  + + N+T      +  + ++IL  N      +        +R  C+ + E     
Sbjct: 308 DIRFELPLKNITSLLPKQDPLISTEILVYNDLSHSLS-----NAESRKLCEAVGENVVVT 362

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
                + +   + +   +  +  VA+ LN      I   + M +          PL    
Sbjct: 363 SIREHSQLQTWVKKLPQLRQLPIVAEELNQKLQIGINSIVFMTNRPKYLVSGTTPLGKLR 422

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLK 470
                     + L  ++ +  +F W++DFP +   EE+ + I   H+PFT P      L 
Sbjct: 423 LLLHELLVKKKALPELDKDLLKFVWVVDFPLFSPTEEKNQSITSTHHPFTAPHWDDVHLL 482

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
               LS++   YD+V NG E+  G IR H  ++      +V    E     F  L R   
Sbjct: 483 EKKPLSVRGLHYDIVVNGIELGGGSIRIHNPDIQRFVLKDVLKLPENRYATFEHLIRVLS 542

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGGIA G DR+  LL  A  +REV  FP + +  DLL+GSPS +  E L++  + 
Sbjct: 543 SGCPPHGGIALGFDRLAALLTNAPGIREVIAFPKTSSGADLLIGSPSAIPEEMLKDYNVA 602

Query: 591 IVENPK 596
           I    +
Sbjct: 603 ITRQTQ 608


>gi|323210669|gb|EFZ95547.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
          Length = 410

 Score =  397 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 165/404 (40%), Positives = 232/404 (57%), Gaps = 6/404 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADS--LPLDANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G   +R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407
              G      PVAK L     EAI  R   QDGD  FF A    
Sbjct: 357 RAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFGADTKK 400


>gi|115434592|ref|NP_001042054.1| Os01g0153400 [Oryza sativa Japonica Group]
 gi|113531585|dbj|BAF03968.1| Os01g0153400 [Oryza sativa Japonica Group]
          Length = 384

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 144/392 (36%), Positives = 218/392 (55%), Gaps = 10/392 (2%)

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQ+LM SGF++Y+QIA CFRDED R+DR P EF QLDME++F   +D+L   E ++R +F
Sbjct: 1   KQMLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQLDMEIAFTSMEDMLKLNEELMRHIF 59

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
           +E  +   + N F R+ Y +A+ RYGTD+PDLR    + +V++ F+ S F++F+  L   
Sbjct: 60  QEVGDIK-LPNPFPRLTYTEAMNRYGTDRPDLRFDWQLKDVSDAFLGSSFKIFADTLENG 118

Query: 322 PGYEVWAIPAKGGGGNRAFCDRMNEW--ARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
              +   +P      +     +   +  A   G  GL ++  ++ ++G + G+GP+   L
Sbjct: 119 GVIKALCVPGGAKEFSNTDLKKGTVYTEASKAGAKGLPFL--KVMDNGELEGIGPLVASL 176

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
                E +   LD + GD   F  G+           R  IA +L +I+ +     W+ D
Sbjct: 177 KPEKKEQLLKHLDAKSGDLILFALGEQSAANRILGRLRLFIAHKLEVIDTSAHSILWVTD 236

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           FP +EWN +E++ +  H+PFT P         NDL S +A  YD++ NG EI  G +R +
Sbjct: 237 FPMFEWNSDEQRYEALHHPFTAPNPEDM----NDLPSARALAYDMIYNGVEIGGGSLRIY 292

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
            S+V  + F  +GIS E  E +FG L   F  G PPHGGIA G+DR+VMLL G  ++R+V
Sbjct: 293 KSDVQQRIFEIIGISPEQAEEKFGYLLECFDMGAPPHGGIAYGLDRLVMLLAGENSIRDV 352

Query: 560 SLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
             FP +      L  +PS V  +QL++LG R 
Sbjct: 353 IAFPKTTTAQCSLTKAPSPVDPQQLKDLGFRT 384


>gi|10434343|dbj|BAB14228.1| unnamed protein product [Homo sapiens]
          Length = 463

 Score =  395 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 147/465 (31%), Positives = 235/465 (50%), Gaps = 19/465 (4%)

Query: 138 LHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  N+  R++++  MR  +     F++  TP L   +P GA++FLVPSR   G FY+LPQ
Sbjct: 1   MQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEFLVPSR-EPGKFYSLPQ 59

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+EMSFV+Q  I + +E +
Sbjct: 60  SPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIEMSFVDQTGIQSLIEGL 118

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           L+  +   ++ + V   F  + + + +  YGTDKPD R  + + ++++ F ++E      
Sbjct: 119 LQYSW--PNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFGMKIIDISDVFRNTEIGFLQD 176

Query: 317 ILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPV 375
            LS      +   IP       R   + +  +A       +  +F   + + N     PV
Sbjct: 177 ALSKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEILPVFLNANRNWN----SPV 232

Query: 376 AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-----IINCN 430
           A  +       +   ++ Q+ D     AG+  K CS     R   A  L      + +  
Sbjct: 233 ANFIMESQRLELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLECADLLETRGVVLRDPT 292

Query: 431 CFEFCWIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
            F F W++DFP +   EE  + ++ AH+PFT P      L   +    ++  YDLV NG 
Sbjct: 293 LFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTEPKKARSQHYDLVLNGN 352

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G IR H +E+     + +      +      L +A   G PPHGGIA G+DR++ L
Sbjct: 353 EIGGGSIRIHNAELQRYILATLLKEDVKM---LSHLLQALDYGAPPHGGIALGLDRLICL 409

Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           + G+ ++R+V  FP S    DL+  +P +V  E+L+   +R+ + 
Sbjct: 410 VTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRVSKP 454


>gi|530412|emb|CAA83720.1| Asp-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 483

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 167/497 (33%), Positives = 270/497 (54%), Gaps = 16/497 (3%)

Query: 44  HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEI 103
            YGITQ+V   ++    +  ++++E+V+ I G+V+ R  +++N  +ITG+IE+  + + +
Sbjct: 1   RYGITQLVIEQENIN--LINNLKNEYVIEISGIVVKR--KSVNKELITGEIEVIVKDLLV 56

Query: 104 LSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
           ++ +E  P  +  +    E  R  YR+LDLRR  +  N++ R +I + +R  +   NF+E
Sbjct: 57  INKSELTPFVLENDVNVNEDTRLTYRYLDLRRQVMQNNLIIRAKINHIIRNYLTDLNFLE 116

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             TP    S+PEGAR FLVPSR+N+  FYALPQ+PQ +KQLLM SG DRY+QI  CFRDE
Sbjct: 117 VETPYFAKSTPEGARHFLVPSRLNKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDE 176

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
           D R DR P EF QLD+EMSF   +D++   E++++ + +E  N        LR+ Y DAI
Sbjct: 177 DLRIDRQP-EFTQLDLEMSFATSEDVMQISESLIKKILKEVKNFEIKEPL-LRLSYKDAI 234

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
             YG+DKPDLR  + +H + + F +S+ ++F     ++   +            +   + 
Sbjct: 235 DLYGSDKPDLRYELKIHTLNDIFKNSDIKMF-----LDSQNKYIRAVCIDQLLTKKQLEE 289

Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403
           +N+ A+      +A+I        N A  G +A  L  V  + +    ++Q+  +     
Sbjct: 290 LNQQAKQFHFNSIAFIKVE-----NNAWSGSLASQLTEVQKKQLIEEFNIQNKATIILNI 344

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463
           G   +        R  +A+   +   + F+  W++DFP +E++E+E +   AH+PFT P+
Sbjct: 345 GKYEEISQLMGAIRISLAKMFNLETKDDFKLLWVVDFPLFEFSEQENRYVAAHHPFTSPK 404

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
               +    +     A  YDLV NGFEI  G  R   SE+  + F  V ++++ VE  FG
Sbjct: 405 EESLADFDTNKKDALACAYDLVMNGFEIGGGSQRITNSEIQQRMFDAVELNQKQVEANFG 464

Query: 524 GLYRAFQCGMPPHGGIA 540
               A++ G P H GIA
Sbjct: 465 WFMNAYKYGAPYHAGIA 481


>gi|164655283|ref|XP_001728772.1| hypothetical protein MGL_4107 [Malassezia globosa CBS 7966]
 gi|159102656|gb|EDP41558.1| hypothetical protein MGL_4107 [Malassezia globosa CBS 7966]
          Length = 715

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 195/647 (30%), Positives = 286/647 (44%), Gaps = 69/647 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           RTH+C  +G +DV   V L+GWV   R     + F+ ++D  G  Q+V + D A  +   
Sbjct: 64  RTHACSQVGSNDVNERVVLAGWVLAPRKISRQLAFVPLQDASGTVQLVLH-DPALVDAFA 122

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-- 121
            V  E V+ + G V +R+   IN  + TG +E+  +   +L+ A         +   P  
Sbjct: 123 QVPVESVVSVQGAVQARAEGAINPAMRTGAVEVRVESWTLLNAATPTLPFYATQCREPAS 182

Query: 122 ---ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              ES+R K+R+LDLRR +L +NI +R+R+ ++ RC +    F E  TPIL  S+PEGAR
Sbjct: 183 LPKESLRAKHRYLDLRRSSLSENIRRRSRVAHAARCFLHDHAFTEIETPILLRSTPEGAR 242

Query: 179 DFLVPSR-VNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           +FLVP+R   +  FYAL Q+PQQ KQLLM SG  DRYFQ A CFRDED R DR P EF Q
Sbjct: 243 EFLVPTRSAPEPQFYALQQSPQQPKQLLMVSGVTDRYFQFAKCFRDEDGRKDRQP-EFTQ 301

Query: 237 LDMEMSFVEQD-----------DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           LDMEMSFV              +I +  E ++R ++   +    + N F  + Y+ A+  
Sbjct: 302 LDMEMSFVCGHGDQPAWPLGGTEIRDVTEGLVRSMWTAAAQPYALPNPFPIMSYEHAMTT 361

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHS--EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
           YG+DKPD R  + + N+         +  V  +  S                G+R   + 
Sbjct: 362 YGSDKPDTRFGLRIANLIPTCTSHALDILVLPQYESCKLSGRAKEALLLDQHGHRCAIEH 421

Query: 344 MNEWARSQGQPGLAYIFWR----LDESGNVAGMGPV-----AKHLNIVNTEAIRVRLDMQ 394
               A       LA++       + +  +   +GP         L     + +R     +
Sbjct: 422 FK--AHRSAPDKLAHLLLTKSRHVHDVMHSGKLGPADRALDVSSLTHTLQDVLRDATAFR 479

Query: 395 DGDSCFFIAGDPLKFCSF---------------AADARNHIAQELGIINCNCFEFCWIMD 439
              +     GD    C                   D R  IA  L I +       WI  
Sbjct: 480 CDGASAHAHGDSDDRCDVYLATRSLPIDGGSTPMGDLRLRIADALPIRSAEP-AVLWITQ 538

Query: 440 FPFYEWNEEEK------KIDFAHNPFTMPQGGMESLKGND------------LLSIKAFQ 481
           FP +   + +K      +   +H+PFT P                       L  I    
Sbjct: 539 FPLFTRADADKAEAAHGRWSSSHHPFTAPLASDVQRLYESVACRAPADRDAILAQIHGQH 598

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG EI  G +R H  ++    F ++    +    RF  L  A + G PPH GIA 
Sbjct: 599 YDLVLNGAEIGGGSVRVHDPDLQRMIFRDILELSDDEVGRFSHLLHALESGAPPHAGIAL 658

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS-VEQLREL 587
           G DR + +L    ++R+V  FP + +  D L  SP+ +   EQ  +L
Sbjct: 659 GFDRFMAILCDTLSIRDVMAFPKTGSGTDPLFSSPAALDAPEQRAQL 705


>gi|215765302|dbj|BAG86999.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 382

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 142/390 (36%), Positives = 216/390 (55%), Gaps = 10/390 (2%)

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           +LM SGF++Y+QIA CFRDED R+DR P EF QLDME++F   +D+L   E ++R +F+E
Sbjct: 1   MLMVSGFEKYYQIARCFRDEDLRADRQP-EFTQLDMEIAFTSMEDMLKLNEELMRHIFQE 59

Query: 264 FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
             +   + N F R+ Y +A+ RYGTD+PDLR    + +V++ F+ S F++F+  L     
Sbjct: 60  VGDIK-LPNPFPRLTYTEAMNRYGTDRPDLRFDWQLKDVSDAFLGSSFKIFADTLENGGV 118

Query: 324 YEVWAIPAKGGGGNRAFCDRMNEW--ARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNI 381
            +   +P      +     +   +  A   G  GL ++  ++ ++G + G+GP+   L  
Sbjct: 119 IKALCVPGGAKEFSNTDLKKGTVYTEASKAGAKGLPFL--KVMDNGELEGIGPLVASLKP 176

Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFP 441
              E +   LD + GD   F  G+           R  IA +L +I+ +     W+ DFP
Sbjct: 177 EKKEQLLKHLDAKSGDLILFALGEQSAANRILGRLRLFIAHKLEVIDTSAHSILWVTDFP 236

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +EWN +E++ +  H+PFT P         NDL S +A  YD++ NG EI  G +R + S
Sbjct: 237 MFEWNSDEQRYEALHHPFTAPNPEDM----NDLPSARALAYDMIYNGVEIGGGSLRIYKS 292

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           +V  + F  +GIS E  E +FG L   F  G PPHGGIA G+DR+VMLL G  ++R+V  
Sbjct: 293 DVQQRIFEIIGISPEQAEEKFGYLLECFDMGAPPHGGIAYGLDRLVMLLAGENSIRDVIA 352

Query: 562 FPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           FP +      L  +PS V  +QL++LG R 
Sbjct: 353 FPKTTTAQCSLTKAPSPVDPQQLKDLGFRT 382


>gi|7022598|dbj|BAA91658.1| unnamed protein product [Homo sapiens]
          Length = 463

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 146/465 (31%), Positives = 234/465 (50%), Gaps = 19/465 (4%)

Query: 138 LHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +  N+  R++++  MR  +     F++  TP L   +P GA++FLVPSR   G F +LPQ
Sbjct: 1   MQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEFLVPSR-EPGKFCSLPQ 59

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+EMSFV+Q  I + +E +
Sbjct: 60  SPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIEMSFVDQTGIQSLIEGL 118

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           L+  +   ++ + V   F  + + + +  YGTDKPD R  + + ++++ F ++E      
Sbjct: 119 LQYSW--PNDKDPVVVPFPTMTFAEVLATYGTDKPDTRFGMKIIDISDVFRNTEIGFLQD 176

Query: 317 ILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPV 375
            LS      +   IP       R   + +  +A       +  +F   + + N     PV
Sbjct: 177 ALSKPHGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEILPVFLNANRNWN----SPV 232

Query: 376 AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-----IINCN 430
           A  +       +   ++ Q+ D     AG+  K CS     R   A  L      + +  
Sbjct: 233 ANFIMESQRLELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLECADLLETRGVVLRDPT 292

Query: 431 CFEFCWIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
            F F W++DFP +   EE  + ++ AH+PFT P      L   +    ++  YDLV NG 
Sbjct: 293 LFSFLWVVDFPLFLPKEESPRELESAHHPFTAPHPSDIHLLYTEPKKARSQHYDLVLNGN 352

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G IR H +E+     + +      +      L +A   G PPHGGIA G+DR++ L
Sbjct: 353 EIGGGSIRIHNAELQRYILATLLKEDVKM---LSHLLQALDYGAPPHGGIALGLDRLICL 409

Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           + G+ ++R+V  FP S    DL+  +P +V  E+L+   +R+ + 
Sbjct: 410 VTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRVSKP 454


>gi|302694319|ref|XP_003036838.1| hypothetical protein SCHCODRAFT_45975 [Schizophyllum commune H4-8]
 gi|300110535|gb|EFJ01936.1| hypothetical protein SCHCODRAFT_45975 [Schizophyllum commune H4-8]
          Length = 654

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 196/641 (30%), Positives = 298/641 (46%), Gaps = 60/641 (9%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFE 60
           +  RTH+CG L  +DVG  V L+GW+   R  G  + F  ++D  G TQ+V   D +   
Sbjct: 23  YPKRTHNCGTLSAADVGKKVVLAGWLLPERKAGKHVSFFPLKDSSGATQLVVKRDGSAAG 82

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +   V  E V+ I+G V  R             I++      +L+ A+E    V  +  +
Sbjct: 83  L-SDVTVESVVLIEGEVSLRPENQRRVP----DIDIVVSDFRVLNPAQEDLPFVPSDVTH 137

Query: 121 --PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-------FIECSTPILTA 171
              E +R +YR+LDLRR  L +NI KR+++ ++ R  +  E        F E  TP+L  
Sbjct: 138 LANEDLRARYRYLDLRRTALSENIQKRSKVAHTARTVLEQEGTQHVHLGFTEVETPVLLR 197

Query: 172 SSPEGARDFLVPSRV-----NQGSFYALPQAPQQYKQLLMASG-FDRYFQIAPCFRDEDP 225
           SSPEGAR++LVPSR+     ++  FYAL Q+PQQ KQLL+ SG  DRYFQ+A CFRDE  
Sbjct: 198 SSPEGAREYLVPSRIARAEDDRPVFYALQQSPQQPKQLLICSGAVDRYFQLAKCFRDEGG 257

Query: 226 RSDRLPGEFYQLDMEMSFVEQ---------------DDILNTMENVLRGVFEEFSNGNTV 270
           R DR P EF Q+DMEM+FV                  ++ +T+E ++  ++        +
Sbjct: 258 RKDRQP-EFTQIDMEMAFVSWGPDEASLARGWRIGGAEVRDTIERLVPAMWAAAEGTE-L 315

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
            ++F  + Y +A+ R+G+DKPD R  + +      +   +    S I    P  +  A+ 
Sbjct: 316 PSDFPVMTYQEAMNRFGSDKPDTRFGLEVST----WAPYDRAPISDITPYLPSAQREALE 371

Query: 331 AKGGGGNRAFCDRMNEW--ARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIR 388
            +G     A   R  E+  A    Q G   I        +      +   L   +  A  
Sbjct: 372 REGEILQ-ALIVRGGEFTAASHAAQSGAERILIDEGNRASWHRTSSILAGLPSPSDSAC- 429

Query: 389 VRLDMQDGDSCFFIAGDPLKFCSF--AADARN---HIAQELG--IINCNCFEFCWIMDFP 441
               +Q GD  +      L           R     +AQ+ G   +  +   F WI +FP
Sbjct: 430 EIPSLQPGDHLWLARRTKLAQGGSTPLGKLRLQLSELAQQRGDLTLPAHARNFLWITEFP 489

Query: 442 FYEWNEEEK------KIDFAHNPFTMPQGGMESLKGND-LLSIKAFQYDLVCNGFEIASG 494
            +   +E+K      +   +H+PFT P         +  +  ++   YDLV NG EI  G
Sbjct: 490 LFTNADEDKEFLAHGRWSSSHHPFTAPMWEDVPKMYDGRINEVRGQHYDLVLNGVEIGGG 549

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +R H + +    F+N+       +  F  L  A +CG PPHGGIA G DRI+ +L    
Sbjct: 550 SVRVHDAAMQDHIFTNILQLSPSEKAPFEHLLHALRCGAPPHGGIALGFDRIMSILCNTP 609

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           ++R+V  FP +    DLL  SP+ V  + LRE  L  ++ P
Sbjct: 610 SIRDVIAFPKTSGGTDLLFRSPAPVGEDVLREYRLEYLKKP 650


>gi|259487051|tpe|CBF85413.1| TPA: Aspartyl-tRNA synthetase, hypothetical mitochondrial protein
           (Eurofung) [Aspergillus nidulans FGSC A4]
          Length = 679

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 186/614 (30%), Positives = 285/614 (46%), Gaps = 49/614 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSE 68
           L  +  G  V L G++         + F+ ++D       Q+V+   +A FE  +S+R  
Sbjct: 84  LTQASPGQDVTLHGYLGVRSDISKKLSFVRLQDPTMKYNIQLVSTAQNASFEQLRSLRPN 143

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGEREYPESIRF 126
             + + G V ++ A+           E+  + I++L+   ++    P             
Sbjct: 144 SPVTVKGKVQAKKAKNAEME-KRDPWEIVLEDIQLLNDFPSDIWMAP-------DMVHPP 195

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIA--ENFIECSTPILTASSPEGARDFLVP 183
           K+R L LR    L + +  R ++ N  R  +      F+E  TP+L  S+PEGAR+FLVP
Sbjct: 196 KHRHLQLRTSSELREALEFRAQVRNVCREELEQGRPPFVEIETPLLFKSTPEGAREFLVP 255

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R + G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMSF
Sbjct: 256 TRKH-GLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMSF 313

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
              +D++  +E ++R ++    +    S  F R+ Y DA+ RYG+DKPD R  + ++ V 
Sbjct: 314 ATGEDVMRVVEGIIRRLWSTLMDTEAPSGPFRRLSYQDAMTRYGSDKPDTRYGMEIYRV- 372

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQP------GL 356
           EH +  +  + +KI  +                  A  + + ++  S  G P      G 
Sbjct: 373 EHLLPVD--LINKITPLTNPIVEIFKINGNDNDPAAMSEFITKFLDSPAGAPFNENPEGG 430

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA--- 413
             IF   D    + G+ P          E +   ++   GD     A +   F   +   
Sbjct: 431 PGIFV-YDARKPLCGLQP----FGFQAAEYVEEIIEPDHGDLLVMQAREAAPFTGGSTPI 485

Query: 414 ADARNHI---AQELGIINCN-CFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMP 462
            D R  +   A E G       F+F WI+DFP +  + + +        I   H+PFT P
Sbjct: 486 GDLRRALYSAAVETGFKPAAVGFDFLWIVDFPLFSPSTDSEPGQGGAAGISSTHHPFTAP 545

Query: 463 Q-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           +      L   D   + A  YDLV NG E+  G  R H + V      NV          
Sbjct: 546 KSAADVDLLLTDPTKVVADHYDLVVNGVELGGGSRRIHDAAVQEFVLRNVLQMPPERLTE 605

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVS 580
           F  L  A + G PPH G+A G DR+V ++LG  +VR+V  FP +     D ++ +PS VS
Sbjct: 606 FSHLLEALRAGCPPHAGLALGFDRLVAVMLGKDSVRDVIAFPKTGKLGEDPMVKAPSPVS 665

Query: 581 VEQLRELGLRIVEN 594
           +E L+   LR+ + 
Sbjct: 666 LEALKTYHLRLTDE 679


>gi|213854909|ref|ZP_03383149.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 371

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 121/374 (32%), Positives = 186/374 (49%), Gaps = 4/374 (1%)

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           ED R+DR P EF Q+D+E SF+    +   ME ++R ++ E    +    +F  + + +A
Sbjct: 1   EDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEA 57

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
            RRYG+DKPDLRNP+ + +V +     EF VF+   +   G         G   +R   D
Sbjct: 58  ERRYGSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQID 117

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
               + +  G  GLAYI       G      PVAK L     EAI  R   QDGD  FF 
Sbjct: 118 DYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMIFFG 177

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           A +           R  + ++L + + + +   W++DFP +E ++ E  +   H+PFT P
Sbjct: 178 ADNKKVVADALGALRLKLGKDLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAP 236

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           +    S          A  YD+V NG+E+  G +R H  E+    F  +GI+++    +F
Sbjct: 237 RDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKF 296

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           G L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+  +PS  +  
Sbjct: 297 GFLLDALKYGTPPHVGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQA 356

Query: 583 QLRELGLRIVENPK 596
            L ELG+++V+  +
Sbjct: 357 ALTELGIQVVKKAE 370


>gi|71024657|ref|XP_762558.1| hypothetical protein UM06411.1 [Ustilago maydis 521]
 gi|46101951|gb|EAK87184.1| hypothetical protein UM06411.1 [Ustilago maydis 521]
          Length = 779

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 191/671 (28%), Positives = 294/671 (43%), Gaps = 97/671 (14%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSAC---FE 60
           RTH+CG+L        V L+GW+   R     + F  I DH G  Q+  +   A     +
Sbjct: 90  RTHTCGELRTLHDKQQVVLTGWLQSSRQVSKQLGFFTIFDHTGSIQLKVHRTEASPLLLD 149

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGERE 119
              S+  +  + I G V  R      A+  TG IE+  + + +L+ A ++LP        
Sbjct: 150 SFSSIPLQSAILIRGKVARRPTHDSKADQSTGAIEVLPESLTLLNPATKDLPFQPSDSIH 209

Query: 120 YP---ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                  +R +YR+LDLRR +L +NI  R+RI +++R  +    F+E  TP+L +S+PEG
Sbjct: 210 ADGVSSELRARYRYLDLRRPSLAENIRLRSRITHAIRNHLYDNGFLEIETPVLLSSTPEG 269

Query: 177 ARDFLVPSRVN-------QGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSD 228
           AR+FLVP+R++       +  FYALPQ+PQQ KQLL+ASG  D+YFQIA CFRDED R D
Sbjct: 270 AREFLVPTRLSSSSNAQAEPHFYALPQSPQQPKQLLIASGVTDKYFQIAKCFRDEDGRKD 329

Query: 229 RLPGEFYQLDMEMSFVE---------------------------------QDDILNTMEN 255
           R P EF Q+D+EM FV                                     + + +E 
Sbjct: 330 RQP-EFTQIDLEMGFVSGGPEAESTSSLTCDADADADADARDAQGHWRIGGQQVRDVIEG 388

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++  V+   +   +V + F  + Y  A+ RYG+DKPDLR    +H+V+  F        +
Sbjct: 389 LIAHVWRA-AGRGSVPHRFPVMSYWTAMTRYGSDKPDLRYGYTLHDVSSGFKPCSESDVA 447

Query: 316 KILSV------------------NPGYEVWAIPAKGGGGNRAFC--DRMNEWARSQGQPG 355
           K+ +                       E   +P KG          D ++E A    +  
Sbjct: 448 KLDATSVSLEILPYQHHAAGSLSKKELERLLLPFKGKVERFRISSKDNIHELAALLLKKS 507

Query: 356 LAYIFWRLDESGNVAGMGPV-AKHLNIVNTEAIRVRLDMQDGDSCFFIA-----GDPLKF 409
                +   E GN   +  V  +HL      AI       D      I        P   
Sbjct: 508 ALTRQFLQKEFGNDVSVSEVDVEHLAQTLRAAIEAEARSDDSSEPVDIFVSLRSNPPEGG 567

Query: 410 CSFAADARNHIAQEL---GIINCNCFEFCWIMDFPFYEWNEEEK-----------KIDFA 455
            +   + R  +A  L    ++  +     WI +FP +   +++K           +   +
Sbjct: 568 STPLGEVRKLVAASLCDKKLLTMSGDALAWITEFPLFTLADDDKNALSLQCSSSRRWQSS 627

Query: 456 HNPFTMPQGGMES------LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           H+PFT P     +      L  + + SI+   YDLV NG EI  G +R H   +     +
Sbjct: 628 HHPFTAPVASDIAMLLGGNLDASSIASIRGQHYDLVLNGQEIGGGSVRIHSRALQQCVLA 687

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           ++       + RF  L  A  CG PPH GIA G DR++ +L   +++R+V  FP   +  
Sbjct: 688 HILELTPSEQARFSHLLHALDCGAPPHAGIALGFDRLMAILCRTESIRDVIAFPKQGSGI 747

Query: 570 DLLMGSPSTVS 580
           D L  SP+ ++
Sbjct: 748 DPLFRSPAPLT 758


>gi|301631421|ref|XP_002944796.1| PREDICTED: aspartyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 415

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 125/367 (34%), Positives = 186/367 (50%), Gaps = 6/367 (1%)

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           +F Q+D E SF+ +++I    + ++  VF++    +     F  + Y DA  R+G+DKPD
Sbjct: 48  QFTQIDCETSFLNEEEIRAIFQRMITEVFQQQLGVDLGE--FPIMTYQDAAHRFGSDKPD 105

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
           LR  +    +TE     +F+VFS   +   G  V      GG  +R   D+  E+ +  G
Sbjct: 106 LRVKLEFTELTEVMKDVDFKVFSAPATTQGGRVVALRVPGGGAISRGEIDQYTEFVKIYG 165

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
             GLA+I       G      P+ K+L+     AI  R   QDGD  FF A         
Sbjct: 166 AKGLAWIKVNQAAKGRDGLQSPIVKNLHDAAIAAILQRTGAQDGDLLFFGADKEKIVNDA 225

Query: 413 AADARNHIAQ-ELGIIN---CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
               R  I   E G  N    N +   W++DFP +E + EE +    H+PFT P+ G E 
Sbjct: 226 IGALRLKIGHSEFGKQNGLFENRWAPLWVVDFPMFEHDAEEDRWVAVHHPFTSPKDGHED 285

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           L   D     A  YD+V NG+E+  G +R H ++V  + F+ + I  +    +FG L  A
Sbjct: 286 LMDTDPAKCIAKAYDMVLNGWELGGGSVRIHRADVQAKVFAALNIGPQDQRAKFGYLLDA 345

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
            Q G PPHGG+A G+DR++ L+ GA+++R+V  FP +Q   DLL  +PS V  +QLREL 
Sbjct: 346 LQYGAPPHGGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELH 405

Query: 589 LRIVENP 595
           +R+  NP
Sbjct: 406 IRLRNNP 412



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 37/70 (52%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
          R+H CG +  + +G  + L GWV+R R HGG+IF+D+RD  G  Q         F   + 
Sbjct: 4  RSHYCGLVTEALMGQTLSLCGWVNRRRDHGGVIFIDLRDREGYVQFTQIDCETSFLNEEE 63

Query: 65 VRSEWVLCID 74
          +R+ +   I 
Sbjct: 64 IRAIFQRMIT 73


>gi|67522507|ref|XP_659314.1| hypothetical protein AN1710.2 [Aspergillus nidulans FGSC A4]
 gi|40745674|gb|EAA64830.1| hypothetical protein AN1710.2 [Aspergillus nidulans FGSC A4]
          Length = 658

 Score =  389 bits (998), Expect = e-105,   Method: Composition-based stats.
 Identities = 186/614 (30%), Positives = 285/614 (46%), Gaps = 49/614 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSE 68
           L  +  G  V L G++         + F+ ++D       Q+V+   +A FE  +S+R  
Sbjct: 63  LTQASPGQDVTLHGYLGVRSDISKKLSFVRLQDPTMKYNIQLVSTAQNASFEQLRSLRPN 122

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGEREYPESIRF 126
             + + G V ++ A+           E+  + I++L+   ++    P             
Sbjct: 123 SPVTVKGKVQAKKAKNAEME-KRDPWEIVLEDIQLLNDFPSDIWMAP-------DMVHPP 174

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIA--ENFIECSTPILTASSPEGARDFLVP 183
           K+R L LR    L + +  R ++ N  R  +      F+E  TP+L  S+PEGAR+FLVP
Sbjct: 175 KHRHLQLRTSSELREALEFRAQVRNVCREELEQGRPPFVEIETPLLFKSTPEGAREFLVP 234

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R + G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMSF
Sbjct: 235 TRKH-GLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMSF 292

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
              +D++  +E ++R ++    +    S  F R+ Y DA+ RYG+DKPD R  + ++ V 
Sbjct: 293 ATGEDVMRVVEGIIRRLWSTLMDTEAPSGPFRRLSYQDAMTRYGSDKPDTRYGMEIYRV- 351

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQP------GL 356
           EH +  +  + +KI  +                  A  + + ++  S  G P      G 
Sbjct: 352 EHLLPVD--LINKITPLTNPIVEIFKINGNDNDPAAMSEFITKFLDSPAGAPFNENPEGG 409

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA--- 413
             IF   D    + G+ P          E +   ++   GD     A +   F   +   
Sbjct: 410 PGIFV-YDARKPLCGLQP----FGFQAAEYVEEIIEPDHGDLLVMQAREAAPFTGGSTPI 464

Query: 414 ADARNHI---AQELGIINCN-CFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMP 462
            D R  +   A E G       F+F WI+DFP +  + + +        I   H+PFT P
Sbjct: 465 GDLRRALYSAAVETGFKPAAVGFDFLWIVDFPLFSPSTDSEPGQGGAAGISSTHHPFTAP 524

Query: 463 Q-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           +      L   D   + A  YDLV NG E+  G  R H + V      NV          
Sbjct: 525 KSAADVDLLLTDPTKVVADHYDLVVNGVELGGGSRRIHDAAVQEFVLRNVLQMPPERLTE 584

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVS 580
           F  L  A + G PPH G+A G DR+V ++LG  +VR+V  FP +     D ++ +PS VS
Sbjct: 585 FSHLLEALRAGCPPHAGLALGFDRLVAVMLGKDSVRDVIAFPKTGKLGEDPMVKAPSPVS 644

Query: 581 VEQLRELGLRIVEN 594
           +E L+   LR+ + 
Sbjct: 645 LEALKTYHLRLTDE 658


>gi|12044886|ref|NP_072696.1| aspartyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351148|sp|P47282|SYD_MYCGE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3844646|gb|AAC71252.1| aspartyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166079025|gb|ABY79643.1| aspartyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 550

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 163/577 (28%), Positives = 270/577 (46%), Gaps = 43/577 (7%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G +    +   + + GW+ R++  G I F+ + D  G  QV         E  + +  E
Sbjct: 9   IGSISTEQLNKTIVIIGWIKRIKKLGEINFIIVGDKSGTIQVTCKDK----EQIQQLTRE 64

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ +         +     + + + EL    I++ S ++  PL +  E +  E +R KY
Sbjct: 65  DIVIV---------KAKLQRLDSVRFELINPTIKLFSKSKTPPLIIEDETDALEEVRLKY 115

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR  + K ++ R + I ++R     + FIE  TP L+ S+PEGA+DFLVP+R+ +
Sbjct: 116 RYLDLRRRLMQKRLLLRHQFILAIRNWFNQQGFIEIETPTLSKSTPEGAQDFLVPARIRK 175

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYAL Q+PQ YKQLLM +G ++YFQIA  +RDED R DR P E  Q+D E+SF  Q  
Sbjct: 176 DCFYALVQSPQIYKQLLMIAGVEKYFQIARVYRDEDSRKDRQP-EHTQIDFEISFCNQKM 234

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I+N +E +   VF +          F    + +   R+G+DKPDLR    + + T  F  
Sbjct: 235 IMNLVEKLFFSVFLDVFQIKIKKT-FPVFKFSELFERFGSDKPDLRYGFEIKDFTSLFQD 293

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
            + + F+K++          I       +      + + A+         +   +    N
Sbjct: 294 HQNQ-FTKLIEAKGII--GGIELTNIELSTDKIKALRKIAKDHD------VSLEVHNKNN 344

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
                 +                  +             K  +     RN +   L I+ 
Sbjct: 345 STLKTSIK---------------CDEKNTLLLVANKSKKKAWTALGAIRNELKYHLDIVK 389

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            N + FCW++DFP Y+++E+  +    HN F+ P+        ++     + Q+DLV NG
Sbjct: 390 PNQYSFCWVVDFPLYDFDEKTNQWISNHNIFSKPKQEWIDNFESNKNEALSEQFDLVLNG 449

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           FEI SG IR +   V  +  +++ I      N+F  L  A+Q G P HGG+  GIDR++M
Sbjct: 450 FEIGSGSIRINDPIVQKRLMNSLNIDP----NKFAFLLEAYQYGAPVHGGMGLGIDRLMM 505

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
           +L    N+REV  FP + +  ++   +P  +  E+++
Sbjct: 506 ILNQTDNIREVIAFPKNNHGIEVHTNAPDKIDKEEVK 542


>gi|255660164|ref|ZP_05405573.1| aspartyl-tRNA synthetase [Mycoplasma genitalium G37]
          Length = 556

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 163/577 (28%), Positives = 270/577 (46%), Gaps = 43/577 (7%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G +    +   + + GW+ R++  G I F+ + D  G  QV         E  + +  E
Sbjct: 15  IGSISTEQLNKTIVIIGWIKRIKKLGEINFIIVGDKSGTIQVTCKDK----EQIQQLTRE 70

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ +         +     + + + EL    I++ S ++  PL +  E +  E +R KY
Sbjct: 71  DIVIV---------KAKLQRLDSVRFELINPTIKLFSKSKTPPLIIEDETDALEEVRLKY 121

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LDLRR  + K ++ R + I ++R     + FIE  TP L+ S+PEGA+DFLVP+R+ +
Sbjct: 122 RYLDLRRRLMQKRLLLRHQFILAIRNWFNQQGFIEIETPTLSKSTPEGAQDFLVPARIRK 181

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FYAL Q+PQ YKQLLM +G ++YFQIA  +RDED R DR P E  Q+D E+SF  Q  
Sbjct: 182 DCFYALVQSPQIYKQLLMIAGVEKYFQIARVYRDEDSRKDRQP-EHTQIDFEISFCNQKM 240

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I+N +E +   VF +          F    + +   R+G+DKPDLR    + + T  F  
Sbjct: 241 IMNLVEKLFFSVFLDVFQIKIKKT-FPVFKFSELFERFGSDKPDLRYGFEIKDFTSLFQD 299

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
            + + F+K++          I       +      + + A+         +   +    N
Sbjct: 300 HQNQ-FTKLIEAKGII--GGIELTNIELSTDKIKALRKIAKDHD------VSLEVHNKNN 350

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
                 +                  +             K  +     RN +   L I+ 
Sbjct: 351 STLKTSIK---------------CDEKNTLLLVANKSKKKAWTALGAIRNELKYHLDIVK 395

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            N + FCW++DFP Y+++E+  +    HN F+ P+        ++     + Q+DLV NG
Sbjct: 396 PNQYSFCWVVDFPLYDFDEKTNQWISNHNIFSKPKQEWIDNFESNKNEALSEQFDLVLNG 455

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           FEI SG IR +   V  +  +++ I      N+F  L  A+Q G P HGG+  GIDR++M
Sbjct: 456 FEIGSGSIRINDPIVQKRLMNSLNIDP----NKFAFLLEAYQYGAPVHGGMGLGIDRLMM 511

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
           +L    N+REV  FP + +  ++   +P  +  E+++
Sbjct: 512 ILNQTDNIREVIAFPKNNHGIEVHTNAPDKIDKEEVK 548


>gi|321454344|gb|EFX65518.1| hypothetical protein DAPPUDRAFT_264578 [Daphnia pulex]
          Length = 572

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 182/635 (28%), Positives = 274/635 (43%), Gaps = 119/635 (18%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+CG+L  SDVG  V+LSGWV   R +    F+ +RD YG+TQ+V   +         
Sbjct: 13  RSHTCGELRKSDVGRKVKLSGWVQFQRMNK---FVLLRDAYGVTQLVVPDE--------- 60

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
                                  N +TG IE+    +E+LS +         E      I
Sbjct: 61  -----------------------NQLTGDIEVILDDVEVLSSSISNLPFTVQESPKLLKI 97

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
               R                               F++  TP L   +P GA++F+VP+
Sbjct: 98  V---RH----------------------------HGFVDIETPTLFRRTPGGAQEFVVPT 126

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R + G FY+L Q+PQQ+KQLLM  GFDRYFQIA C+RDE  + +R P EF Q+D+EMSF 
Sbjct: 127 RTS-GKFYSLVQSPQQFKQLLMIGGFDRYFQIARCYRDEGTKPNRQP-EFTQVDIEMSFT 184

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +++I   +E +L  V+ E  +   +   F  + Y DA++ YG DKPD R  +++ +VTE
Sbjct: 185 TKENIQRLIEGLLNHVWPE--DMGRIPIPFPEMTYKDAMKNYGVDKPDTRFDVLLQDVTE 242

Query: 305 HFVHSEF-RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR-SQGQPGLAYIFWR 362
               SE  R+F     V+               +++      E A+ + G+  L+++  R
Sbjct: 243 LAKASEISRIFGTSEIVDFAAIALVFKDSAALISKSAEQSFLESAKMTTGKTNLSFVLNR 302

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP---------------- 406
           + +         +AK L      +I  RL    GD      G                  
Sbjct: 303 IQDGNK--WKSSLAKKLTQETMNSIGDRLGASAGDVVLLGLGPRESLVMEWWGALYSLHF 360

Query: 407 --------------------LKFCSFAADARNHIAQELGII----NCNCFEFCWIMDFPF 442
                                         R  +A  L  +      N   F W++DFP 
Sbjct: 361 EPRRETLLAVLNYGAIDVLTWILVPSMGKMRLEVANHLETLGVKLRSNSKNFLWVVDFPL 420

Query: 443 YEWNEE--EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           +  +EE     +  AH+PFT P    E L  +  L ++   YDLV NG EI  G IR H 
Sbjct: 421 FLPSEELDGGPLQSAHHPFTAPHPEDEHLLRSSPLDVRGLHYDLVLNGSEIGGGSIRIHQ 480

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           S+V       +    +        L +A  CG PPHGGIA G+DR++ ++   K++R+V 
Sbjct: 481 SDVQELVLKEIL---QEDPANLHHLLKALSCGAPPHGGIALGLDRLMSIICDTKSIRDVI 537

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            FP S +  DL+ G+PS++S ++     +  V N 
Sbjct: 538 AFPKSLDGKDLMSGAPSSISEKEKEMYHIGAVHNK 572


>gi|114565518|ref|XP_001149903.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 1
           [Pan troglodytes]
          Length = 548

 Score =  384 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 156/510 (30%), Positives = 254/510 (49%), Gaps = 26/510 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 226

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 227 LVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 284

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  + + 
Sbjct: 285 MSFVDQTGIQSLIEGLLQYSW--PNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMKII 342

Query: 301 NVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           ++++ F ++E       LS      +   IP       R   + + ++A       +  +
Sbjct: 343 DISDVFRNTEIGFLQDALSKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQEILPV 402

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F   + + N     PVA  +       +   ++ Q+ D     AG+  K CS     R  
Sbjct: 403 FLNANRNWN----SPVANFIMESQRLELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLE 458

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE  + ++ AH+PFT P      L   +
Sbjct: 459 CADLLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTE 518

Query: 474 LLSIKAFQYDL----VCNGFEIASGGIRNH 499
              +    + +    V  G E+ +      
Sbjct: 519 PKKVPYLYFQIKRKCVYKGKELQTSRSDER 548


>gi|50556998|ref|XP_505907.1| YALI0F26433p [Yarrowia lipolytica]
 gi|49651777|emb|CAG78719.1| YALI0F26433p [Yarrowia lipolytica]
          Length = 649

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 176/642 (27%), Positives = 276/642 (42%), Gaps = 86/642 (13%)

Query: 5   RTHSCGDL-----GVSDVGSFVRLSGWVHRV--RPHGGIIFLDIRDHYGITQVVANPDSA 57
           RTHS   L      +      V L GW+H+   +    + F  +RD  G    + + +S 
Sbjct: 44  RTHSITGLLKDAPALEQSQKKVTLQGWIHKKPRKVSKNLTFASLRDTNGDIIQLVDSNSP 103

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-- 115
              + +S++ E  + ++G+V  +           G  +L      +L+ A E    +   
Sbjct: 104 S--MLRSMKPESAVVVEGVVAKQR------TAKKGVFDLVVSSSSVLNEANEKGSQLTLG 155

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
             +++P      YR+L LR+  L   +  R   + + R  +    F E  TP+L  S+PE
Sbjct: 156 DTKDWPAE----YRYLQLRQPQLQAALKLRANAMRASRSVLDNLGFTEVETPLLFKSTPE 211

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GAR+FLVP+R  +   YALPQ+PQQYKQLLMASG  RY+Q+A CFRDED R DR P EF 
Sbjct: 212 GAREFLVPTR-KRNLMYALPQSPQQYKQLLMASGVHRYYQLAKCFRDEDLRQDRQP-EFT 269

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV----------SNNFLRICYDDAIRR 285
           Q+DMEM+F    D+   +E ++  +F +  N N             + F  + + +A+ +
Sbjct: 270 QVDMEMAFANGADVREVVEKLVLKIFADTVNKNIYTLDANENLVQQSTFNPMTFKEALGK 329

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
           YG DKPDLR    + +V+EH                P  E+  +  +    +  F     
Sbjct: 330 YGIDKPDLRYTCAITDVSEHATSFNEDF--------PVCEILHVTKENAPESLDFLSEAR 381

Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD 405
           ++              ++ E    +    V++         +   L +  GD        
Sbjct: 382 QYTNRI------PDVIQITEENLSSWNQQVSQF-------KLDKTLPVSVGDVVLASTRQ 428

Query: 406 PLKFCSF--AADARNHI--------------AQELGIINCNCFEFCWIMDFPFYEWNE-- 447
              + +      AR  +               ++L  I  + F   W++DFP +  +   
Sbjct: 429 TTSYENPTPLGRARQLLIKEYPEKWRRQLASGEQLPSI-EDTFVASWVIDFPLFSPSSMD 487

Query: 448 ------------EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
                       +  +I  +H+PFTM       L   D L ++   YDLV NG E+  G 
Sbjct: 488 SDPEKSQPFPKFDYTQIVASHHPFTMAVLEDYPLLETDPLKVRGQHYDLVLNGVEVGGGS 547

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            R H S++    F  +       E  FG L RAF  G PPH G A G DR+V +L G  +
Sbjct: 548 TRVHDSQLQNYIFKEIMKIPNS-EKLFGHLLRAFDVGCPPHAGFAIGFDRLVAMLAGYSS 606

Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           +R+V  FP +    D ++GSPS  +  QL    +R+     K
Sbjct: 607 IRDVIAFPKTVTGADPMIGSPSAATSAQLAPYHVRVAPKENK 648


>gi|296811002|ref|XP_002845839.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238843227|gb|EEQ32889.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 687

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 176/609 (28%), Positives = 274/609 (44%), Gaps = 53/609 (8%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-DSACFEIAKSVRSEWVLCIDG 75
           G  V L G++ + +  G  + F+ + D      V     +S   +  KS+     + I G
Sbjct: 93  GKTVILHGYIGKRKKIGKNMTFVRLSDPTLSQSVQIVVSNSQVLDALKSIEPNSAVAIHG 152

Query: 76  LVMSRSAETINANIITGQ----IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
           +V S+  +  ++ +        +E+  Q I+ L+       P               R L
Sbjct: 153 IVKSKENQPQSSEVDDKDGLNTVEVELQDIQCLNE-----FPKDIIVTSDTVFPPSKRHL 207

Query: 132 DLRRD-TLHKNIVKRTRIINSMRCRM--IAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
            +R D +L +++  R +   ++R  +      F+E  TPIL  S+PEGAR+FLVP+R N+
Sbjct: 208 QIRNDASLRQSLAFRAKANVALRRALEEFEPPFLEVETPILFKSTPEGAREFLVPTR-NR 266

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLDMEMSF   +D
Sbjct: 267 GLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEMSFATAED 325

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           ++ T E +++ ++            F R+ Y  A+  YG+DKPD R  + +  V ++   
Sbjct: 326 VMTTTEALVKKLWASVMPEPLAPEPFPRMSYHMAMSLYGSDKPDTRFDMRLRRVDQYLPG 385

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR----------SQGQPGLAY 358
                 SKI S+N      A   KG G  +     +N +              G PG+  
Sbjct: 386 D---FISKITSLNSPSID-AFKVKGNGCPKETMRVLNSFMNTSEGKYFLDNPDGAPGV-- 439

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC---SFAAD 415
             + +D S  ++G+ P            +    +++ GD  FF       F    + A +
Sbjct: 440 --FAIDSSKPMSGLSPA----GFEAAWELERLFELEHGDLLFFQPRKDEPFSGGSTRAGE 493

Query: 416 ARNHIAQEL----GIINCNCFEFCWIMDFPFYEWNEE-------EKKIDFAHNPFTMPQ- 463
            R  + + +           F F WI  FP +  + +          I   H+PFT P+ 
Sbjct: 494 LRLAMHRFMVEKEFHSPPVGFNFHWITGFPLFSPSVDSEPGQGGTAGIASTHHPFTAPRT 553

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
               +L   D +   A  YDLV NG E+  G  R H + V      ++          F 
Sbjct: 554 AEDAALLLTDPIKAIADHYDLVVNGVELGGGSRRIHSAAVQELILRDILKVPPSRLQSFS 613

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            L    + G PPH GIA G DR++ ++ G ++VR V  FP      D ++ +PS ++ E 
Sbjct: 614 HLLECLRAGCPPHAGIALGFDRLIAVMRGTQSVRNVIAFPKGNRGEDPIVNTPSPMTEES 673

Query: 584 LRELGLRIV 592
           LR   L++ 
Sbjct: 674 LRTYHLQLR 682


>gi|87304128|ref|ZP_01086677.1| Aspartyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87281458|gb|EAQ73519.1| Aspartyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 406

 Score =  382 bits (981), Expect = e-103,   Method: Composition-based stats.
 Identities = 136/408 (33%), Positives = 214/408 (52%), Gaps = 17/408 (4%)

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSRV  G ++ALPQ+PQ +KQLLM  G +RY+Q+A CFRDED R+DR P EF QLD+EMS
Sbjct: 4   PSRVCGGDWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDVRADRQP-EFTQLDIEMS 62

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ ++ IL   E+++  +++       +   F R+ + DA+ RYGTD+PD R  + +  V
Sbjct: 63  FMGEEQILQLNEDLICAIWKSVKGIE-LPRPFPRMTWHDAMERYGTDRPDTRYGMELVTV 121

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNEWARSQGQPGLAYIFW 361
           ++      F+VFS  +      +V A+P      +        + ++ +Q        F 
Sbjct: 122 SDIVQDMGFKVFSGAVKSGGAVKVIAVPGGNDALSNVRIKPGGDVFSEAQAAGAGGLAFI 181

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           R+ + G +  +G +  +L+      +  R     G    F AG+           R ++A
Sbjct: 182 RVRDGGEIDTIGAIKDNLSDEQKAELLERTGATPGTLLLFGAGETAIVNKALDRVRQYLA 241

Query: 422 QELGIINCN----CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL-- 475
           +EL ++  +     + F W++DFP +E+N +E + +  H+PF  P        G+D    
Sbjct: 242 KELKLVQPDRQNDAWNFLWVVDFPMFEFNGDEDRYEALHHPFCAPNTDD---LGSDPAQW 298

Query: 476 -----SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
                S +A  YDLV NG E+  G +R H S +  Q    VG+  E  + +FG L  A  
Sbjct: 299 ATTLPSARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEAQEQFGFLINALD 358

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
            G PPHGG+A GIDR+VMLL G +++R+   FP +Q    L+  +PS+
Sbjct: 359 MGAPPHGGLAFGIDRMVMLLAGEESIRDTIAFPKTQQARCLMTDAPSS 406


>gi|320583678|gb|EFW97891.1| aspartyl-tRNA synthetase, mitochondrial [Pichia angusta DL-1]
          Length = 646

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 178/635 (28%), Positives = 288/635 (45%), Gaps = 77/635 (12%)

Query: 6   THSCGDLGVSD--VGS-FVRLSGWVHR--VRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           TH+  ++      VG   V L+GW+ R   +    ++F  +RD       +   D    E
Sbjct: 35  THTIREINKDHNRVGQSTVILNGWIDRPPKKLSSKLVFACLRDTKSDYAQLICKDQETAE 94

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              S + E V+ + G V  + ++           EL  + +++L+ A+   + +   +  
Sbjct: 95  KLASRKPEDVVSVVGTVQPKKSKDGQPET----WELVLKDLKVLNSADIQTVQLNSLKHT 150

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
                 ++R+L LR+    +++ KR +I    R  + A  F+E  TP+L  S+PEGA +F
Sbjct: 151 TGQFPQEFRYLQLRQPYYQRSLRKRAQIAAVARRVLDANEFVEIETPLLFKSTPEGADEF 210

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVP+R  QG FYALPQ+PQQYKQLLMASGFDRY+Q+A CFRDED R+DR P EF Q+D+E
Sbjct: 211 LVPTR-KQGQFYALPQSPQQYKQLLMASGFDRYYQLAKCFRDEDLRADRQP-EFTQIDLE 268

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTV-------------SNNFLRICYDDAIRRYG 287
           MSF +++D+++T+E V++ +F+E    +                  F R+ Y +A+  YG
Sbjct: 269 MSFAKKEDVMHTVETVIKAIFKETRQADLFTPSEDMSSLVLSGEKPFKRLSYREAMHYYG 328

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
            DKPDLR+ +    + E +              +    V  +   G        D +++ 
Sbjct: 329 IDKPDLRSNLRFKLLNEFY--------------DSQGSVQGVVLPGAAN----LDGIDQL 370

Query: 348 ARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF---IAG 404
             S           ++    ++      +  +   N   +   L +Q GD       +  
Sbjct: 371 ISSHEYSNRRPYIAKIKSMNDLTTWHSASPFVFKGNINELNESLGLQVGDVVALGDLVYP 430

Query: 405 DPLKFCSF------AADARNHIAQ--------ELGIINCNCFEFCWIMDFPFYEWNEE-- 448
           D  +              R    Q        + G    + F  CW+ +FP +   E+  
Sbjct: 431 DKERHRHVYENPTPLGKFRQLAIQHFPDLWRYDTGQSTNDTFAACWVTNFPLFSPTEDPL 490

Query: 449 ----------EKKIDFAHNPFTMP---QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
                     +   +  H+PFTM    QG   SL    +L ++   YDLV NG E+  G 
Sbjct: 491 SKGKEYPVYLKDTYEATHHPFTMFDLTQGVTPSLDN--VLDVEGEHYDLVINGVEVGGGS 548

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            R H ++V       +       E  FG L +A   G PPH G A G DR+  +++G+ N
Sbjct: 549 QRIHDAQVQRYVLKEILKV-HNAEELFGHLLKALDSGCPPHAGFAVGFDRLCSMIVGSSN 607

Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           +R+V  FP +Q   D ++GSPS V+ + L    ++
Sbjct: 608 IRDVVAFPKTQAGTDPVVGSPSRVAQDTLDNYHIQ 642


>gi|299747321|ref|XP_001836954.2| aspartyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|298407466|gb|EAU84571.2| aspartyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 687

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 182/666 (27%), Positives = 288/666 (43%), Gaps = 102/666 (15%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIA 62
           RTHSCG L   D GS V L+GW+   R    + F  ++D  G TQ+  N   + +     
Sbjct: 48  RTHSCGSLSAQDAGSKVVLAGWLLPERKGKAVSFYPLKDSEGTTQLTVNHSSNPSASNTL 107

Query: 63  KSVRSEWVLCIDGLVMSRSAETINA--------------------NIITGQIELSAQKIE 102
            S+  E  + I G V  R                               G I++   ++ 
Sbjct: 108 SSISVESAVLIQGTVALRPETARRPVREHPLSLSRHVLIVRLCPLKGPAGDIDVEVDQVT 167

Query: 103 ILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENF 161
           +L+ A     +P        E +R +YRFLDLRR  L  NI KR+++ + +R  +  + F
Sbjct: 168 LLNPAASLPFVPSNVHNLPSEDLRARYRFLDLRRTALSSNIKKRSKVAHIIRSTLHDQGF 227

Query: 162 IECSTPILTASSPEGARDFLVPSR----------VNQGSFYALPQAPQQYKQLLMASGF- 210
            E  TP+L  SSPEGAR+FLVP+R           +   FYAL Q+PQQ KQLL+ SG  
Sbjct: 228 TEVETPVLLRSSPEGAREFLVPTRQSNHSDASPRESDPLFYALQQSPQQPKQLLICSGGV 287

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ----------------------DD 248
           D+YFQIA CFRDED R DR P EF Q+D+EM+FV                         +
Sbjct: 288 DKYFQIAKCFRDEDGRKDRQP-EFTQVDLEMAFVSWGNPNSPPTHPSAEQDQAWNIGGHE 346

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           + + +E+++R ++++      +S  F  + Y +A+ R             + N+++    
Sbjct: 347 VRDVIEDLIRKIWQDVEGV-QLSPRFKVMTYREAMER-------------IVNLSDLLSG 392

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           +       IL         +   +    +R       E   ++      +I  +      
Sbjct: 393 TPTPAGDDILEC--IVVRKSREPEYIAASRTL-----EHPEAER-----WILTKSSVDNW 440

Query: 369 VAGMGPVAK-----HLNIVNTEAIRVRLDMQDGDSCFFIAGD--PLKFCSFAADARNHIA 421
           +     VA+      L     + +   L +Q GD  +       P    +     R  I 
Sbjct: 441 L-LKSKVARAIYDADLPEGAQKILNEALQLQPGDHVYLSHRSRLPKGGSTALGRTRLGIF 499

Query: 422 ----QELGIINCNCFEFCWIMDFPFYEWNEEEK------KIDFAHNPFTMPQG-GMESLK 470
               +   +       F WI +FP +  ++ +K      +   +H+PFT P    +++L 
Sbjct: 500 ETAQKRGDVTVTEEPHFLWITEFPLFTHDDSDKEFLAHGRWSSSHHPFTAPMWQDIDALY 559

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D+  ++   YDLV NG EI  G +R H + +    F+ V    +  +  F  L  A +
Sbjct: 560 KGDIEHVRGQHYDLVLNGVEIGGGSVRIHDATMQDYIFTQVLQLSDQEKAPFNHLLHALR 619

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           CG PPHGGIA G DR++ +L   +++R+V  FP S    D +  SP+ V  E L + G+R
Sbjct: 620 CGAPPHGGIALGFDRLMAMLCKTQSIRDVIAFPKSSGGKDPMFRSPAPVDGEVLGQYGIR 679

Query: 591 IVENPK 596
           +  N +
Sbjct: 680 LASNEE 685


>gi|212543427|ref|XP_002151868.1| aspartyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
 gi|210066775|gb|EEA20868.1| aspartyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
          Length = 688

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 177/624 (28%), Positives = 285/624 (45%), Gaps = 53/624 (8%)

Query: 6   THSC-GDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
           TH+    L  +  G  V L G++         + F+ + D      +    +  +   + 
Sbjct: 82  THTFPSLLKNASPGDTVVLHGYLGNRADISKKLSFVRLTDPTMRQNIQIISSAKNEVHQQ 141

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITG-----QIELSAQKIEILSVAEELPLPVFG 116
            KS+ S   + I G V ++                  +E+S   I +L+   +  +    
Sbjct: 142 LKSLPSNSPVAIQGTVQAKKGSGEGEREAPDVEKIDSLEISLTNIWLLNEFSKDIIMT-- 199

Query: 117 EREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASS 173
                     + R L LR D  L + +  R+      R  +      FIE  TP+L  S+
Sbjct: 200 ---SETVFPAEQRHLQLRSDRGLREALRFRSEARKVCREELENMSPPFIEIETPLLFKST 256

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           PEGAR+F+VP+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P E
Sbjct: 257 PEGAREFIVPTR-RKGLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-E 314

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F QLD+EMSF   +D++ ++E V+R ++    N +  +  F R+ Y +A+ R+G+DKPD 
Sbjct: 315 FTQLDLEMSFATGEDVMKSIEKVVRKLWSSLLNIDLGTQPFTRMPYQEAMGRFGSDKPDT 374

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR------AFCDRM--N 345
           R  + +  + ++ +  +  V       +P  E + + ++    ++       F D     
Sbjct: 375 RLGMEIVRL-DYMLPVD-LVQKITPLTDPIVEGFKLESEDNDPSKTLELVTRFLDSPAGV 432

Query: 346 EWAR-SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG 404
           E+ +   G PG+    +  D    + G+ P          E +   L+   GD     A 
Sbjct: 433 EFNKNPDGGPGI----FVYDAKKPLRGLMP----FGFEAAERVEELLEPDHGDLIVLQAR 484

Query: 405 DPLKFC---SFAADARNHI---AQELGIIN-CNCFEFCWIMDFPFYEWNEEEK------- 450
               F    +   D R  +   A + G+      F F W++DFP +   +E +       
Sbjct: 485 KNAPFSGGSTPLGDLRKALHSEAVKAGVKEAPKGFNFLWVVDFPLFSPIDENEPGQGGTA 544

Query: 451 KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
            +   H+PFT P+      L   D  ++ A  YDL+ NG E+  G  R H + V    F 
Sbjct: 545 GLASTHHPFTAPKSAADVDLMVADPAAVVADHYDLIVNGVELGGGSRRIHDARVQEIVFR 604

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           ++          F  L  A + G PPH GIA G DR++ ++LG ++VR+V  FP S    
Sbjct: 605 DILKMPASRLTEFSHLLEALKAGCPPHAGIALGFDRLIAIMLGKESVRDVIAFPKSGKGE 664

Query: 570 DLLMGSPSTVSVEQLRELGLRIVE 593
           D+++GSPS +S + L    LR+ +
Sbjct: 665 DVMVGSPSELSEDVLNTYHLRLRQ 688


>gi|302502919|ref|XP_003013420.1| hypothetical protein ARB_00238 [Arthroderma benhamiae CBS 112371]
 gi|291176984|gb|EFE32780.1| hypothetical protein ARB_00238 [Arthroderma benhamiae CBS 112371]
          Length = 621

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 169/614 (27%), Positives = 268/614 (43%), Gaps = 53/614 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-DSACFEIAKSVRSEWV 70
              + G  V + G++ + +  G  + F+ + D      V     +    +  KS+     
Sbjct: 22  KEQNNGRPVTIHGYIGKRKKIGKNMTFVRLSDPTLSQSVQIVVSNPHSLDALKSIEPNSA 81

Query: 71  LCIDGLVMSRSAETI----NANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + + G+V S+ +++             +E+  Q ++ L+       P             
Sbjct: 82  VVVSGIVKSKESQSQFRESGDKSELDDVEVELQDVQCLNE-----FPRDIIITPDTVFPP 136

Query: 127 KYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVP 183
             R L +R D  L +++  R +   ++R  +      F+E  TPIL  S+PEGAR+FLVP
Sbjct: 137 SKRHLQIRNDPSLRQSLAFRAKANAALRRALEECEPPFLEIETPILFKSTPEGAREFLVP 196

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R NQG  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLDMEMSF
Sbjct: 197 TR-NQGLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEMSF 254

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
              +D++ T E +++ ++            F R+ Y +A+  YG+DKPD R  + +H V 
Sbjct: 255 ATAEDVITTTEALVKKLWASVMPEPLGPEPFPRMSYYEAMASYGSDKPDTRFDMKLHRVE 314

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW-----ARSQ-----GQ 353
           ++          KI S+N       I  KG G        +  +     A+       G 
Sbjct: 315 QYLP---ADFIGKISSLNSPVVEAFI-VKGNGHPEETMRVLRSFMNTPEAKPFLENPDGA 370

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC--- 410
           PG     + +D S  + G+              +      + GD  FF            
Sbjct: 371 PG----TFVIDSSKPMGGLSAA----GFEGAWDLETLFKSEHGDLIFFQCRKDEPISGGS 422

Query: 411 SFAADARN----HIAQELGIINCNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPF 459
           + A + R     ++ ++  +     F F W+  FP +  + E +        I   H+PF
Sbjct: 423 TKAGELRLAVHQYMVEKGFLSPPVGFNFHWVTGFPLFSPSVETEPGQGGTAGIASTHHPF 482

Query: 460 TMPQ-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           T P+     +L   D     A  YDLV NG E+  G  R H + V      ++       
Sbjct: 483 TAPRTAEDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSAAVQEFVLRDILKVPPSR 542

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
              F  L    + G PPH GIA G DR++ ++ G  +VR V  FP      D ++ +PS 
Sbjct: 543 LQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTPSVRNVIAFPKGNKGEDPMVKTPSP 602

Query: 579 VSVEQLRELGLRIV 592
           ++ + L+   L++ 
Sbjct: 603 MTEDSLQTYHLQLR 616


>gi|330927912|ref|XP_003302056.1| hypothetical protein PTT_13732 [Pyrenophora teres f. teres 0-1]
 gi|311322828|gb|EFQ89869.1| hypothetical protein PTT_13732 [Pyrenophora teres f. teres 0-1]
          Length = 633

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 179/608 (29%), Positives = 285/608 (46%), Gaps = 49/608 (8%)

Query: 18  GSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCI 73
           G  + + G++   R     + F  +R   G   +     SA  E     +S++    + +
Sbjct: 43  GEDIEVFGYLSTRRDVSNKLSFTMLRHKNGSQCIQLVSTSANEEAHARIRSLKEWTPVIV 102

Query: 74  DGLVMSRSAETINANIITG---QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            G +M R A   +  +      Q E++   I+ L+      +        P       R 
Sbjct: 103 RGKLMDRKAPKDDKYLGMKLEAQKEIAVDHIQPLNEISNDIIIKNDTVFGPH-----QRH 157

Query: 131 LDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           L LR  + L +N++ R+  +   R  + A+ + E  TP+L  S+PEGAR+FLVP+R  +G
Sbjct: 158 LQLRTDNELRQNLILRSEAMAMARQHLNAQMWKEIETPVLFKSTPEGAREFLVPTR-QKG 216

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             YALPQ+PQQYKQ+LMASG  +Y+Q A CFRDED R DR P EF QLDMEM+F  ++++
Sbjct: 217 LAYALPQSPQQYKQILMASGITKYYQFARCFRDEDLRVDRQP-EFTQLDMEMAFAGEEEV 275

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           +  +E +L+ V++  +N       F R+ Y +A+  YG+DKPDLR    +H++T+H    
Sbjct: 276 MQEIERLLKEVWKHVNNVTLH-GRFERMTYHEAMASYGSDKPDLRFKSKIHDITQHLTSD 334

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-------DRMNEWARSQGQPGLAYIFWR 362
                +  L       +    ++     R F        D         GQPG+    + 
Sbjct: 335 LVGKITS-LQNPAIDAMKISMSEDPKITRKFIAGFLDSPDGKPYLDNPDGQPGI----FI 389

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC---SFAADARNH 419
            D S  + G+GP+     +   E++ V    ++GD     A     F    +   + R  
Sbjct: 390 GDLSQPMQGLGPLGYQYVMEGPESLAV----ENGDVLILQARPDAPFSGGSTMLGNLRLA 445

Query: 420 IAQE---LGIIN---CNCFEFCWIMDFPFYEWNEE-------EKKIDFAHNPFTMPQ-GG 465
           + +     G+IN      ++F WI DFP +  + +       E      H+PFT P+   
Sbjct: 446 LHKAAIAQGLINAPEEQDYKFLWITDFPLFTPSSDSEPGQGGEAGFSSTHHPFTAPKTPE 505

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
              +  +D  + KA  YD+V NG E+  G  R H + V    F ++   K      F  L
Sbjct: 506 DVEILLSDPSAAKAAHYDIVVNGVELGGGSRRIHSAAVQEFIFKDILKMKPERIEDFRHL 565

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
               + G PPH GIA G DR++ +L   ++VR+V  FP S    DLL+ SP+ ++ +QL 
Sbjct: 566 LDVLRSGCPPHAGIALGWDRLMAVLCHRESVRDVIAFPKSGKGEDLLVKSPTRMTEDQLS 625

Query: 586 ELGLRIVE 593
              L++ E
Sbjct: 626 TYHLQVKE 633


>gi|302657987|ref|XP_003020704.1| hypothetical protein TRV_05230 [Trichophyton verrucosum HKI 0517]
 gi|291184561|gb|EFE40086.1| hypothetical protein TRV_05230 [Trichophyton verrucosum HKI 0517]
          Length = 621

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 170/610 (27%), Positives = 263/610 (43%), Gaps = 45/610 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHY-GITQVVANPDSACFEIAKSVRSEWV 70
              + G  V + G++ + +  G  + F+ + D     +  +           KS+     
Sbjct: 22  KEQNNGRPVTIHGYIGKRKKIGKNMTFVRLSDPTLSRSVQIVVSSPHSLNALKSIEPNSA 81

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I G+V               + EL   +IE+  V      P               R 
Sbjct: 82  VVISGIV-KSKESQSQFRESGDKSELDGVEIELQDVQCLNEFPRDIIITPDTVFPPSKRH 140

Query: 131 LDLRRDT-LHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVPSRVN 187
           L +R D  L +++  R +   ++R  +      F+E  TPIL  S+PEGAR+FLVP+R N
Sbjct: 141 LQIRNDPSLRQSLAFRAKANAALRRALEECEPPFLEVETPILFKSTPEGAREFLVPTR-N 199

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           QG  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLDMEMSF   +
Sbjct: 200 QGLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEMSFATAE 258

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
           D++ T E +++ ++            F R+ Y +A+  YG+DKPD R  + +H V ++  
Sbjct: 259 DVITTTEALVKKLWASVMPEPLGPEPFPRMSYYEAMASYGSDKPDTRFDMKLHRVEQYLP 318

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW-----ARSQ-----GQPGLA 357
                   KI S+N       I  KG G        +  +     A+       G PG  
Sbjct: 319 ---ADFIGKISSLNSPVVEAFI-VKGNGHPEETMRVLRSFMNTPEAKPFLENPDGAPG-- 372

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC---SFAA 414
              + +D S  + G+              +     ++ GD  FF            + A 
Sbjct: 373 --TFVIDSSKPMGGLSAA----GFEGAWDLETLFKLEHGDLVFFQCRKDEPISGGSTKAG 426

Query: 415 DARN----HIAQELGIINCNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMPQ 463
           + R     ++ ++  +     F F W+  FP +  + E +        I   H+PFT P+
Sbjct: 427 ELRLAVHQYMVEKGFLSPPVGFNFHWVTGFPLFSPSVETEPGQGGTAGIASTHHPFTAPR 486

Query: 464 -GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
                +L   D     A  YDLV NG E+  G  R H + V      ++          F
Sbjct: 487 TAEDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSAAVQEFVLRDILKVPPSRLQSF 546

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
             L    + G PPH GIA G DR++ ++ G  +VR V  FP      D ++ +PS ++ +
Sbjct: 547 SHLLECLRAGCPPHAGIALGFDRLIAVMRGTPSVRNVIAFPKGNKGEDPMVKTPSPMTED 606

Query: 583 QLRELGLRIV 592
            L+   L++ 
Sbjct: 607 SLQTYHLQLR 616


>gi|121707085|ref|XP_001271727.1| aspartyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
 gi|119399875|gb|EAW10301.1| aspartyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
          Length = 678

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 174/615 (28%), Positives = 281/615 (45%), Gaps = 51/615 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRD---HYGITQVVANPDSACFEIAKSVRS 67
           +  +  G  V L G++         + F+ + D    + I  V  + +S   E  KS+  
Sbjct: 83  IANASAGQEVVLHGYLGTRSDLSKKLSFVRLTDPTMKHTIQLVSFSKNSPL-EKLKSINV 141

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
              + + G+V  + ++  +   +    E+   +I+ L+   +  +        PE     
Sbjct: 142 NSPVAVRGIVQPKKSKGSDVEQLD-SWEIQVTEIDPLNEFPKEIIMTQDTTFAPE----- 195

Query: 128 YRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVPS 184
           +R+L LR D  L   +  R ++ N  +  +      F+E  TP+L  S+PEGAR+FLVP+
Sbjct: 196 HRYLQLRSDSELRDALRFRAQVRNICKEELEECRPPFVEIETPLLFKSTPEGAREFLVPT 255

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLDMEMSF 
Sbjct: 256 R-RRGLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEMSFS 313

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             ++++ T+E ++R ++         S  F R+ Y +A+ RYG+DKPD R  + +  + +
Sbjct: 314 TGENVMRTVEGIIRRLWSSLMKDTAPSGPFRRMPYQEAMSRYGSDKPDTRFGMEISRI-D 372

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGG---GGNRAFCDRMNEWA------RSQGQPG 355
           + +  +  V      V+P  E +            +      ++  A        +G PG
Sbjct: 373 YLLPVD-LVNKITPLVDPIIEAFKFEGNDNDPIAASEFIGQFLDSPAGAPFNNNPEGGPG 431

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA-- 413
           +    +  D    ++G+ P          E I   LD   GD     A +   F   +  
Sbjct: 432 I----FIYDAKKPLSGLQP----FGFEAAEHIEELLDPDHGDLIVIQARERAPFAGGSTP 483

Query: 414 -ADARNHI---AQELGIIN-CNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTM 461
             D R  +   A   G       ++F W++DFP +  + + +        I   H+PFT 
Sbjct: 484 IGDLRRALHTAAVTSGFKPAPTGYDFMWVVDFPLFSPSSDSEPGQGGAAGISSTHHPFTA 543

Query: 462 PQ-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
           P+      L   D     A  YDLV NG E+  G  R H + V      ++   +     
Sbjct: 544 PKTAADVDLLLTDPTKAVADHYDLVVNGVELGGGSRRIHDAAVQEFILRDILQMRPERLA 603

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTV 579
            F  L  A + G PPH G+A G DR+V ++LG ++VR+V  FP +     D ++ +PS +
Sbjct: 604 DFSHLLDALRAGCPPHAGLALGFDRLVAVMLGKESVRDVIAFPKTGKGGEDAMVKAPSMM 663

Query: 580 SVEQLRELGLRIVEN 594
           + E L    L + + 
Sbjct: 664 TEEALETYHLHLRDE 678


>gi|307138530|ref|ZP_07497886.1| aspartyl-tRNA synthetase [Escherichia coli H736]
 gi|331642481|ref|ZP_08343616.1| aspartate--tRNA ligase [Escherichia coli H736]
 gi|331039279|gb|EGI11499.1| aspartate--tRNA ligase [Escherichia coli H736]
          Length = 377

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 154/381 (40%), Positives = 219/381 (57%), Gaps = 6/381 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R  + IN ++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 239 MTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVA 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           +     EF VF+   +   G         G    R   D    + +  G  GLAYI    
Sbjct: 297 DLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNE 356

Query: 364 DESGNVAGMGPVAKHLNIVNT 384
              G      PVAK LN    
Sbjct: 357 RAKGLEGINSPVAKFLNAEII 377


>gi|327296417|ref|XP_003232903.1| aspartyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326465214|gb|EGD90667.1| aspartyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 685

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 166/607 (27%), Positives = 261/607 (42%), Gaps = 37/607 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHY-GITQVVANPDSACFEIAKSVRSEWV 70
              + G  V + G++ + +  G  + F+ + D     +  +   +       KS+     
Sbjct: 86  KEQNNGRPVTIHGYIGKRKKIGKNMTFVRLSDPTLSRSVQIVVSNPHSLNALKSIEPNSA 145

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G+V               + EL   +IE+  V      P               R 
Sbjct: 146 VVVSGIV-KSKESQSQFRESGDKCELDGVEIELQDVQCLNEFPKDIIITPDTVFPPSKRH 204

Query: 131 LDLRRDT-LHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVPSRVN 187
           L +R D  L + +  R +   ++R  +      F+E  TPIL  S+PEGAR+FLVP+R N
Sbjct: 205 LQIRNDPSLRQTLAFRAKANAALRRALEECEPPFLEIETPILFKSTPEGAREFLVPTR-N 263

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           QG  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLDMEMSF   +
Sbjct: 264 QGLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEMSFATAE 322

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
           D++ T E +++ ++            F R+ Y +A+  YG+DKPD R  + +H V ++  
Sbjct: 323 DVITTTEALVKKLWASVMPEPLGPEPFHRMSYYEAMGSYGSDKPDTRFDMKLHRVEQYLP 382

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL------AYIFW 361
                   KI S+N       I  KG G        +  +  +            A   +
Sbjct: 383 ---ADFIGKISSLNSPVVEAFI-VKGNGHPEETMRVLRSFMNTPEAKDFLDNPDGAPGTF 438

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA---ADARN 418
            +D S  + G+              +      + GD  FF       F        + R 
Sbjct: 439 VIDSSKPMGGLSAA----GFEGAWDLETLFKSEHGDLIFFQCRKDEPFSGGLTKAGELRL 494

Query: 419 ----HIAQELGIINCNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMPQ-GGM 466
               ++ ++  +     F+F W+  FP +  + E +        I   H+PFT P+    
Sbjct: 495 AVHQYMVEKGFLSPPVGFDFHWVTGFPLFSPSVETEPGQGGTAGIASTHHPFTAPRTAED 554

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
            +L   D     A  YDLV NG E+  G  R H + V      ++          F  L 
Sbjct: 555 AALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSAAVQEFVLRDILRVPPSRLQSFSHLL 614

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
              + G PPH GIA G DR++ ++ G ++VR V  FP      D ++ +PS ++ + L+ 
Sbjct: 615 ECLRAGCPPHAGIALGFDRLIAVMRGTQSVRNVIAFPKGNKGEDPMVKTPSPMTEDSLQT 674

Query: 587 LGLRIVE 593
             L++ +
Sbjct: 675 YHLQLRQ 681


>gi|226291546|gb|EEH46974.1| aspartyl-tRNA synthetase, mitochondrial [Paracoccidioides
           brasiliensis Pb18]
          Length = 703

 Score =  375 bits (963), Expect = e-101,   Method: Composition-based stats.
 Identities = 182/613 (29%), Positives = 281/613 (45%), Gaps = 52/613 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGG-IIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +G  V L G++ +    G  + F+ + D       QV+A   +  FE  KS+ +   + +
Sbjct: 106 LGKHVVLHGYLGKRVDIGKKMAFVRLTDPTLSQNVQVIAFAKNKSFEKLKSIEANSSVVV 165

Query: 74  DGLVM--------SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            G+V           + E  N+N+ +  IE++ + I  L+       P            
Sbjct: 166 QGIVQQKQANSKEKAAGERDNSNVDS--IEIALEDIYCLNE-----FPKDIIMTSETIFP 218

Query: 126 FKYRFLDLRRDTLHKNIV-KRTRIINSMRCRM--IAENFIECSTPILTASSPEGARDFLV 182
            + R L +R D+  +  +  R R  N +R  +      F+E  TP+L  S+PEGAR+FLV
Sbjct: 219 AEKRHLQIRADSNLRGALQFRARARNVLRETLEDFQPPFLEIETPLLFKSTPEGAREFLV 278

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMS
Sbjct: 279 PTR-RRGLAYALPQSPQQYKQILMASGIHRYYQFARCFRDEDLRADRQP-EFTQLDLEMS 336

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +D++  +E  ++ ++           +F R  Y++A+ +YG+DKPD+R  + +  +
Sbjct: 337 FATGEDVMKIIEAAMKRLWSTLMRAPLTPESFPRTTYENAMAKYGSDKPDVRIGMEIKRI 396

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS------QGQPGL 356
            EH +  +  + SKI  +N      A+  +G G +      +  +  S         P  
Sbjct: 397 -EHMIPVD--LVSKISPLNNPIVE-AMKLEGNGDSDEMRKFLTSFMDSPTSSWFHNNPEG 452

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF---A 413
               +  D    ++G+ P         T  +   L+++DGD     A +   F       
Sbjct: 453 GPGAFVYDSRKPLSGLQP----FGFEATWVLEQELNLKDGDLLLIQARNNAPFSGSSTPL 508

Query: 414 ADARNHI---AQELGIIN-CNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMP 462
            + R  I   A E         F F W+  FP +    + +        I   H+PFT P
Sbjct: 509 GNLRREIHRAAVEANFTPAPTGFHFLWVTGFPLFSPVSDSEPGQGGAAGITSTHHPFTAP 568

Query: 463 -QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
                 SL   D   + A  YDLV NG E+  G  R H + V      ++          
Sbjct: 569 LHESDISLLLTDPTKVVADHYDLVLNGVELGGGSRRIHSAAVQDFILRDILKMPVERLAD 628

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
           F  L  A + G PPH GIA G DR+V ++LG ++VR+V  FP S    DLL+  PS ++ 
Sbjct: 629 FAHLLEALRAGCPPHAGIALGFDRLVAVMLGRESVRDVIAFPKSGKGEDLLVKCPSEITE 688

Query: 582 EQLRELGLRIVEN 594
           + LR   L +   
Sbjct: 689 DSLRTYHLSLRGK 701


>gi|326477678|gb|EGE01688.1| aspartyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 685

 Score =  375 bits (963), Expect = e-101,   Method: Composition-based stats.
 Identities = 171/614 (27%), Positives = 270/614 (43%), Gaps = 53/614 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHY-GITQVVANPDSACFEIAKSVRSEWV 70
              + G  V + G++ + +  G  + F+ + D     +  +   +       KS+     
Sbjct: 86  KEQNNGRPVTIHGYIGKRKKIGKNMTFVRLSDPTLSRSVQIVVSNPHSLNTLKSIEPNSP 145

Query: 71  LCIDGLVMSRSAETINANIIT----GQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + I G+V S+ ++              +E+  Q ++ L+       P             
Sbjct: 146 VAISGIVKSKESQPQFRESADESGLDGVEIELQDVQCLNE-----FPKDIIITPDTVFPP 200

Query: 127 KYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVP 183
             R L +R D  L +++  R +   ++R  +      F+E  TPIL  S+PEGAR+FLVP
Sbjct: 201 SKRHLQIRNDPSLRQSLAFRAKANAALRRALEECEPPFLEVETPILFKSTPEGAREFLVP 260

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R NQG  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLDMEMSF
Sbjct: 261 TR-NQGLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEMSF 318

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
              +D++ T E +++ ++            F R+ Y +A+  YG+DKPD R  + +H V 
Sbjct: 319 ATAEDVITTTETLVKKLWASVMPEPLGPEPFPRMSYYEAMGSYGSDKPDTRFDMKLHRVE 378

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW-----ARSQ-----GQ 353
           ++          KI S+N       I  KG G        +  +     A+       G 
Sbjct: 379 QYLP---ADFIGKISSLNSPVVEAFI-VKGNGHPEESMRVLRSFMNTPEAKPFLDNPDGA 434

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC--- 410
           PG     + +D S  + G+              +   L  + GD  FF       F    
Sbjct: 435 PG----TFVIDSSKPMGGLSAA----GFEGAWDLETLLKSEHGDLIFFQCRQDEPFSGGS 486

Query: 411 SFAADARN----HIAQELGIINCNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPF 459
           + A + R     ++ ++  +     F F W+  FP +  + E +        I   H+PF
Sbjct: 487 TKAGELRLAVHQYMVEKGFLSPPVGFNFHWVTGFPLFSPSVETEPGQGGTAGIASTHHPF 546

Query: 460 TMPQGG-MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           T P+     +L   D     A  YDLV NG E+  G  R H + V      ++       
Sbjct: 547 TAPRTAKDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSAAVQEFVLRDILKVPPSR 606

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
              F  L    + G PPH GIA G DR++ ++ G ++VR V  FP      D ++ +PS 
Sbjct: 607 LQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTQSVRNVIAFPKGNKGEDPMVKTPSP 666

Query: 579 VSVEQLRELGLRIV 592
           ++ + L+   L++ 
Sbjct: 667 MTEDSLQTYHLQLR 680


>gi|326473216|gb|EGD97225.1| aspartyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 685

 Score =  375 bits (963), Expect = e-101,   Method: Composition-based stats.
 Identities = 170/613 (27%), Positives = 268/613 (43%), Gaps = 51/613 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHY-GITQVVANPDSACFEIAKSVRSEWV 70
              + G  V + G++ + +  G  + F+ + D     +  +   +       KS+     
Sbjct: 86  KEQNNGRPVTIHGYIGKRKKIGKNMTFVRLSDPTLSRSVQIVVSNPHSLNTLKSIEPNSP 145

Query: 71  LCIDGLVMSRSAETINANIIT----GQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + I G+V S+ ++              +E+  Q ++ L+       P             
Sbjct: 146 VAISGIVKSKESQPQFRESADESGLDGVEIELQDVQCLNE-----FPKDIIITPDTVFPP 200

Query: 127 KYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVP 183
             R L +R D  L +++  R +   ++R  +      F+E  TPIL  S+PEGAR+FLVP
Sbjct: 201 SKRHLQIRNDPSLRQSLAFRAKANAALRRALEECEPPFLEVETPILFKSTPEGAREFLVP 260

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R NQG  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLDMEMSF
Sbjct: 261 TR-NQGLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDMEMSF 318

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
              +D++ T E +++ ++            F R+ Y +A+  YG+DKPD R  + +H V 
Sbjct: 319 ATAEDVITTTETLVKKLWASVMPEPLGPEPFPRMSYYEAMGSYGSDKPDTRFDMKLHRVE 378

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN------RAFCDRMN---EWARSQGQP 354
           ++          KI S+N       I    G         R+F +            G P
Sbjct: 379 QYLP---ADFIGKISSLNSPVVEAFIVKGNGNPEESMRVLRSFMNTPEAKPFLDNPDGAP 435

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC---S 411
           G     + +D S  + G+              +   L  + GD  FF       F    +
Sbjct: 436 G----TFVIDSSKPMGGLSAA----GFEGAWDLETLLKSEHGDLIFFQCRQDEPFSGGST 487

Query: 412 FAADARN----HIAQELGIINCNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFT 460
            A + R     ++ ++  +     F F W+  FP +  + E +        I   H+PFT
Sbjct: 488 KAGELRLAVHQYMVEKGFLSPPVGFNFHWVTGFPLFSPSVETEPGQGGTAGIASTHHPFT 547

Query: 461 MPQGG-MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
            P+     +L   D     A  YDLV NG E+  G  R H + V      ++        
Sbjct: 548 APRTAKDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSAAVQEFVLRDILKVPPSRL 607

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
             F  L    + G PPH GIA G DR++ ++ G ++VR V  FP      D ++ +PS +
Sbjct: 608 QSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTQSVRNVIAFPKGNKGEDPMVKTPSPM 667

Query: 580 SVEQLRELGLRIV 592
           + + L+   L++ 
Sbjct: 668 TEDSLQTYHLQLR 680


>gi|1183838|dbj|BAA11815.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa]
          Length = 361

 Score =  375 bits (963), Expect = e-101,   Method: Composition-based stats.
 Identities = 118/364 (32%), Positives = 185/364 (50%), Gaps = 5/364 (1%)

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF Q+D+E SF+++ DI+   E ++R +F+E  +       F  + +++A+RRYG+DKPD
Sbjct: 1   EFTQIDIETSFLDESDIIGITEKMVRQLFKEVLDVEFDE--FPHMPFEEAMRRYGSDKPD 58

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
           LR P+ + +V +     EF+VFS   +   G              R+  D   ++    G
Sbjct: 59  LRIPLELVDVADQLKEVEFKVFSGPANDPKGRVAALRVPGAASMPRSQIDDYTKFVGIYG 118

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
             GLAYI       G      P+ K +   N   I  R+   DGD  FF A      C  
Sbjct: 119 AKGLAYIKVNERAKGVEGLQSPIVKFIPEANLNVILDRVGAVDGDIVFFGADKAKIVCDA 178

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               R  +  +L ++    +   W++DFP +E N++   +   H+PFT P+     L+ N
Sbjct: 179 LGALRIKVGHDLKLLTRE-WAPMWVVDFPMFEENDD-GSLSALHHPFTSPKCTPAELEAN 236

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
              +  +  YD+V NG E+  G IR H   +    F  +GI +   E +FG L  A + G
Sbjct: 237 -PGAALSRAYDMVLNGTELGGGSIRIHDKSMQQAVFRVLGIDEAEQEEKFGFLLDALKYG 295

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGG+A G+DR+VML+ GA ++REV  FP +Q+  D++  +P +V  + LREL +R+ 
Sbjct: 296 APPHGGLAFGLDRLVMLMTGASSIREVIAFPKTQSAGDVMTQAPGSVDGKALRELHIRLR 355

Query: 593 ENPK 596
           E  K
Sbjct: 356 EQAK 359


>gi|242786653|ref|XP_002480848.1| aspartyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218720995|gb|EED20414.1| aspartyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 665

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 176/619 (28%), Positives = 277/619 (44%), Gaps = 45/619 (7%)

Query: 6   THSC-GDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVA--NPDSACFEI 61
           TH+    L  +  G  V L G++         + F+ + D      +    +  +   + 
Sbjct: 60  THTFPSLLQDAKPGDTVVLHGYLGNRADISKKLSFVRLTDPTMRQNIQIISSAKTGSHQQ 119

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--- 118
            KS+ S   + I G + ++          + ++E     +EI ++ +   L  F +    
Sbjct: 120 LKSIPSNSPVAIQGTLQAKKGSGAGDR-ESKEVE-KIDSLEI-NLTDIWLLNDFSKDIIM 176

Query: 119 EYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPE 175
                   + R L LR D  L + +  R+      R  +      FIE  TP+L  S+PE
Sbjct: 177 TSETVFPAEQRHLQLRSDRSLREALRFRSEARKVCREELENNSAPFIEIETPLLFKSTPE 236

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GAR+F+VP+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF 
Sbjct: 237 GAREFIVPTR-RKGLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFT 294

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           QLD+EMSF   +D++  +E V+R ++      +  +  F R+ Y +A+ R+G+DKPD R 
Sbjct: 295 QLDLEMSFATGEDVMGAIEKVIRRLWSSLLGIDLGTEPFTRMPYQEAMSRFGSDKPDARL 354

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
            + +  + ++ +  +  V       NP  E + + ++    ++             G   
Sbjct: 355 GMEIIRL-DYVLPVD-LVQKISPLTNPIVEAFKLESEDNDPSKTLELITRFLDSPAGAE- 411

Query: 356 LAYIFWRLDESGNVAGMGPVAKH-------LNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
                +  +  G        AK              E +   L+   GD     A     
Sbjct: 412 -----FNKNPDGGPGIFVYDAKRPLRGLMPFGFEAAERVEELLEPDHGDLIVLQARKNAP 466

Query: 409 FC---SFAADARNHI---AQELGIIN-CNCFEFCWIMDFPFYEWNEEEK-------KIDF 454
           F    +   D R  +   A + GI      F F W++DFP +   +E +        +  
Sbjct: 467 FSGGSTPLGDLRKALHSEAVKAGIKEAPTGFSFLWVVDFPLFSPIDENEPGQGGTAGLAS 526

Query: 455 AHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
            H+PFT P+      L   D  ++ A  YDLV NG E+  G  R H + V    F ++  
Sbjct: 527 THHPFTAPKSAADVDLMVTDPAAVVADHYDLVVNGVELGGGSRRIHDARVQEIVFRDILK 586

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLM 573
             E     F  L  A + G PPH GIA G DR++ ++LG ++VR+V  FP S    D+++
Sbjct: 587 MPESRLTEFSHLLEALKAGCPPHAGIALGFDRLIAVMLGKESVRDVIAFPKSGKGEDVMV 646

Query: 574 GSPSTVSVEQLRELGLRIV 592
           GSPS +S E L    LR+ 
Sbjct: 647 GSPSELSEEALDTYHLRLR 665


>gi|148707384|gb|EDL39331.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_c [Mus
           musculus]
          Length = 547

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 152/488 (31%), Positives = 245/488 (50%), Gaps = 22/488 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---I 61
           RT++CG+L  S +G  V L GW+   R +    FL +RD +G+ Q++   D +      I
Sbjct: 69  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDCHGLVQILIPQDESAASVRRI 125

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 126 LCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 185

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 186 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 245

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 246 LVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 303

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ  I   +E +L+  +    + + +   F  + + +A+  YGTDKPD R  + + 
Sbjct: 304 MSFVEQTGIQRLVEGLLQYSW--PGDKDPLVTPFPSMTFAEALATYGTDKPDTRFGMKIV 361

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF-CDRMNEWARSQGQPGLAYI 359
           +V++ F ++E R     L+   G         G    R    + + ++A       +  I
Sbjct: 362 DVSDVFRNTELRFLQDALAKPQGTVKAICVHDGAKYLRKEDIEFIRKFAVHHFSQEVLPI 421

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F    ++       P AK +       +   +++Q+ D     AG+  K CS     R  
Sbjct: 422 FLNAKKN----WSSPFAKFIMEEERLELARSMEIQEEDIVLLTAGEHEKACSLLGKLRLE 477

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE   +++ AH+PFT P      L   +
Sbjct: 478 CADLLEMRGAVLRDPAVFSFLWVVDFPLFLAKEESPTELESAHHPFTAPNSSDIHLLYTE 537

Query: 474 LLSIKAFQ 481
              +  + 
Sbjct: 538 PEKVLTYS 545


>gi|321310937|ref|YP_004193266.1| aspartyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319802781|emb|CBY93427.1| aspartyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 556

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 177/559 (31%), Positives = 290/559 (51%), Gaps = 29/559 (5%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G++   +  G ++F +I D  G  QV+   +    E+ K ++ E VL ++G++  R  
Sbjct: 19  IAGFLRVSKSLGKLLFTNIEDVSGSIQVLFKGEQ-AQELLK-IKRESVLSVEGILKKR-- 74

Query: 83  ETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPES-IRFKYRFLDLRRDTLHK 140
           ++IN +I  G+ EL A+K E+LS A ++ P  +    + P+   R KYR+LD+RR+ +  
Sbjct: 75  KSINPSIPLGEWELIAEKYEVLSEARKVLPFELTSASDRPQEATRLKYRYLDIRRE-VKA 133

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV-PSRVNQGSFYALPQAPQ 199
           N++ ++ I+   R  ++ ENF+E  TP L+ SS EGA  F     R  + + ++L Q+PQ
Sbjct: 134 NLISKSEILRIFRDHLVHENFMEVFTPSLSISSQEGANTFDTRVLREKKEAIFSLSQSPQ 193

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            YKQLLM  G +RYFQIA CFR ED R+DR   EF+Q+D+EM+F  Q+ + + +E  L  
Sbjct: 194 LYKQLLMIGGLERYFQIANCFRLEDLRADRQ-YEFFQIDIEMAFSNQEKLFSIIETALSK 252

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           ++ +F     +   F RI YD+A++RYG+DKPDLR   ++ +++ H        F ++  
Sbjct: 253 IWSQFKKSE-LPTPFPRISYDEALKRYGSDKPDLRYEFLIDDLSSH--------FKELSK 303

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
            N   E   +        +       +W  S       YI     + G V     +    
Sbjct: 304 ANGHDEAHGLFIPDIEIFQVE----EKWINSIITKNNIYIL--KIQDGKVMRSSLMNMSY 357

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGD--PLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
             ++   +   L  ++G        +       +     R H ++         ++F WI
Sbjct: 358 EDISIPEVSCPLSYKNGTLILVTCDELTRKNALTSLGSLRMHFSKRPKAQLEQEYKFAWI 417

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           +D+P +E+NE + K   AH+ FT P  G       D+   ++  YDLV NG E+ASG  R
Sbjct: 418 VDWPLFEYNELQGKWVVAHHLFTKPASGSVGF---DIKGERSMGYDLVLNGVELASGSER 474

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           N+  +V    FS  G+S + +E+ FG    AF  G+PPH GIA G+DR+V ++LG  ++R
Sbjct: 475 NNDLDVQNYIFSLAGLSTQEIEDNFGWFLEAFNYGVPPHMGIAIGVDRLVQMILGVSSIR 534

Query: 558 EVSLFPMSQNFCDLLMGSP 576
           EV  FP + +    L  +P
Sbjct: 535 EVIAFPKNNHGICPLTNAP 553


>gi|154275552|ref|XP_001538627.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150415067|gb|EDN10429.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 680

 Score =  372 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 184/611 (30%), Positives = 284/611 (46%), Gaps = 50/611 (8%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCID 74
           G  V L G++ +    G  + F+ + D       Q++A   +  FE  KS+ +   + + 
Sbjct: 77  GKQVVLHGYLGKRVDMGKRMAFVRLTDPTLSQNVQIIAFAKNDSFEKLKSIEANSPVVVQ 136

Query: 75  GLVMSRSAETI------NANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
           G+V  + A +            T  +E+S + I  L+       P             + 
Sbjct: 137 GVVQQKQASSKEKTAAEKDEAKTDCVEISLEDIHPLNE-----FPKDIIMTSDTVFPAEK 191

Query: 129 RFLDLRRD-TLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSR 185
           R L +R D  L   ++ R R  N +R  +      F+E  TP+L  S+PEGAR+FLVP+R
Sbjct: 192 RHLQIRTDSKLRHALLFRARARNVLREALEECQLPFVEIETPLLFKSTPEGAREFLVPTR 251

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMSF  
Sbjct: 252 -RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMSFAT 309

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            +D++  +E  ++ ++    +    S +F R+ Y DA+ +YG+DKPD+R  + +  + EH
Sbjct: 310 GEDVMAIIEAAVKRLWSSLMSEPLPSGSFPRLSYGDAMAKYGSDKPDVRIGMEIKRI-EH 368

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE-------WARSQGQPGLAY 358
            +  +       L       +     +     R F +   +           +G PG A+
Sbjct: 369 MIPVDLVSKISPLHNPIVEAIKLEGNENPEEMRKFLNSFMDSPEASSFHKNPEGGPG-AF 427

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC---SFAAD 415
           ++   D    ++G+ P         T  +   LD++DGD     A     F    +   D
Sbjct: 428 VY---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARKNAPFSGGSTPLGD 480

Query: 416 ARNHIAQE-LG---IINCNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMP-Q 463
            R  I +  +G   I +   F F W+ DFP +    + +        I   H+PFT P +
Sbjct: 481 LRREIHKAAVGATLISSPTGFHFLWVRDFPLFSPITDSEPGQGGAAGIASTHHPFTAPLR 540

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
               SL   D   + A  YDLV NG E+  G  R H + V      ++          F 
Sbjct: 541 KSDVSLLLTDPTKVIADHYDLVVNGVELGGGSRRIHSAAVQEFILRDILKMPADRLADFS 600

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            L  A + G PPH GIA G DR+V ++LG  ++R+V  FP S    DLL+  PS ++ E 
Sbjct: 601 HLLDALRAGCPPHAGIALGFDRLVAVMLGKDSLRDVIAFPKSGKGEDLLVKCPSEMTEES 660

Query: 584 LRELGLRIVEN 594
           LR   L++ ++
Sbjct: 661 LRTYHLQLRDD 671


>gi|317038560|ref|XP_001401678.2| aspartyl-tRNA synthetase [Aspergillus niger CBS 513.88]
          Length = 676

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 183/607 (30%), Positives = 279/607 (45%), Gaps = 50/607 (8%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYG--ITQVVANPDSACFEIAKSVRSEWVLCID 74
           G  V L G++ +    G  + F  + DH      Q+++N  S      K +     + + 
Sbjct: 88  GQSVLLHGYLDKRDDMGKELSFARLYDHTMGRTIQLLSNSQSNTLPQLKKISRGSPVVVQ 147

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V  R  +T         +E++ + I+ L+      +       +P     K+R L LR
Sbjct: 148 GTVKRRVTKTAEEE-RNDYLEIALESIQPLNEFPREIVLFGKNIVHP----PKHRHLQLR 202

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            D   ++ ++ R +  N  R  +      F+E  TP+L  S+PEGAR+F+VP+R  +G  
Sbjct: 203 SDKELRDALRFRAQARNVCRETLEQLKPAFVEIETPLLFKSTPEGAREFIVPTR-KRGKA 261

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           YALPQ+PQQYKQ+LMASG  RYFQ A CFRDED R+DR P EF QLD+EM+F    D++ 
Sbjct: 262 YALPQSPQQYKQILMASGIPRYFQFARCFRDEDLRADRQP-EFTQLDLEMAFAAGQDVMA 320

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +E ++RG++         S  F R+ Y +A+ RYG+DKPD R+ + +H V EH + ++ 
Sbjct: 321 VVEEIIRGLWGNMMREPVPSGPFRRMTYQEAMTRYGSDKPDTRHGMEIHRV-EHLLPAD- 378

Query: 312 RVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEW-------ARSQGQPGLAYIFWR 362
            V       +P  E + +    +     R F  R  +            G PG+    + 
Sbjct: 379 LVSKITPLTDPIVEAFKMDTVEQLPSATREFVSRFFDSTEGVPFNKNPDGAPGI----FI 434

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC---SFAADARNH 419
            DE   + G+GP    L     E I+  LD+  GD     A     F    +     R  
Sbjct: 435 YDEGQPLKGLGP----LGFEAAEKIQEMLDLSHGDLLILQARPQGPFAGGATQLGSIRRA 490

Query: 420 IA-----QELGIINCNCFEFCWIMDFPFYEWNEE-------EKKIDFAHNPFTMPQGG-M 466
           +A     +EL       FEF WI+DFP +   +           +   H+PFT P+    
Sbjct: 491 MAAASISEELREAPPG-FEFLWIVDFPLFSPADASEPGQGGTAGLSATHHPFTAPKTSSD 549

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
             L   D     A  YDLV NG E+  G  R H +      F  +    +   + F  L 
Sbjct: 550 VDLLSKDPTKALADHYDLVVNGVELGGGSRRIHCALTQNYIFKEILKMPKERIDEFQHLL 609

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM-SQNFCDLLMGSPSTVSVEQLR 585
            A   G PPH G A G DR++ ++LG ++VR+V  FP   +   D ++ +P  +S E  R
Sbjct: 610 NALWAGCPPHAGFALGFDRLITVMLGKESVRDVIAFPKIGKKGEDAMVKAPGKISEEVAR 669

Query: 586 ELGLRIV 592
              +++ 
Sbjct: 670 LYNIKLK 676


>gi|115397899|ref|XP_001214541.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114192732|gb|EAU34432.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 561

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 176/571 (30%), Positives = 265/571 (46%), Gaps = 42/571 (7%)

Query: 48  TQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
            Q+V+   +   E  K +R+   + + G V ++ A+       T   E+    +  L+  
Sbjct: 5   IQLVSTAKNGSLEKLKPIRANSPVAVRGRVQAKQAKGSEME-KTDPWEIQVDDVHALN-- 61

Query: 108 EELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAEN--FIEC 164
                P     +       K+R+L LR D  L + +  R ++ N  +  +      F+E 
Sbjct: 62  ---DFPKDILMKSDTVFAPKHRYLQLRVDSELREALRFRAQVHNICKEELEQCRPAFVEI 118

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP+L  S+PEGAR+FLVP+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED
Sbjct: 119 ETPLLFKSTPEGAREFLVPTR-KKGLAYALPQSPQQYKQILMASGIPRYYQFARCFRDED 177

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            R+DR P EF QLD+EMSF   DD++ T+E ++R ++         S  F R+ Y D++ 
Sbjct: 178 LRADRQP-EFTQLDLEMSFATGDDVMRTVEGIIRRLWSSLMKDTAPSGPFRRMAYQDSMS 236

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           RYG+DKPD R  + +  + ++ +  +  +  KI  +                  A  D +
Sbjct: 237 RYGSDKPDTRFGMEISRI-DYLLPVD--LVQKISPLTTPIVEVFKLENNDNDPAAMSDFI 293

Query: 345 NEWARS-QGQP------GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
            ++  S  G P      G   IF   D    + G+ P    L     E +   LD+  GD
Sbjct: 294 TQFLDSPAGAPFNENPEGGPGIFV-YDAKKPLCGLTP----LGFEAAEHLEELLDLDHGD 348

Query: 398 SCFFIAGDPLKFCSFA---ADARNHI---AQELGIIN-CNCFEFCWIMDFPFYEWNEEEK 450
                A     F   +    D R  +   A   G       F+F WI+DFP +  + + +
Sbjct: 349 LIVLQARKQGPFAGGSTPIGDLRRALHSAAVSSGFKPAPTGFDFLWIVDFPLFSPSSDAE 408

Query: 451 -------KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
                   I   H+PFT P+      L  +D   + A  YDLV NG E+  G  R H + 
Sbjct: 409 PGQGGAAGISSTHHPFTAPKTAADVDLLLSDPTRVVADHYDLVVNGVELGGGSRRIHDAA 468

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           V      +V          F  L  A + G PPH G+A G DR+V L+LG ++VR+V  F
Sbjct: 469 VQELIMRDVLKMPAERLADFSHLLDALRAGCPPHAGLALGFDRLVALMLGKESVRDVIAF 528

Query: 563 PM-SQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           P   +   D ++ +PS V+ E L    L++ 
Sbjct: 529 PKIGKGGEDQMVKAPSPVTKEALETYHLQLT 559


>gi|148707383|gb|EDL39330.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b [Mus
           musculus]
          Length = 506

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 152/488 (31%), Positives = 245/488 (50%), Gaps = 22/488 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---I 61
           RT++CG+L  S +G  V L GW+   R +    FL +RD +G+ Q++   D +      I
Sbjct: 28  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDCHGLVQILIPQDESAASVRRI 84

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 85  LCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 144

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 145 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 204

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 205 LVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 262

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ  I   +E +L+  +    + + +   F  + + +A+  YGTDKPD R  + + 
Sbjct: 263 MSFVEQTGIQRLVEGLLQYSW--PGDKDPLVTPFPSMTFAEALATYGTDKPDTRFGMKIV 320

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF-CDRMNEWARSQGQPGLAYI 359
           +V++ F ++E R     L+   G         G    R    + + ++A       +  I
Sbjct: 321 DVSDVFRNTELRFLQDALAKPQGTVKAICVHDGAKYLRKEDIEFIRKFAVHHFSQEVLPI 380

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           F    ++       P AK +       +   +++Q+ D     AG+  K CS     R  
Sbjct: 381 FLNAKKN----WSSPFAKFIMEEERLELARSMEIQEEDIVLLTAGEHEKACSLLGKLRLE 436

Query: 420 IAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGND 473
            A  L      + +   F F W++DFP +   EE   +++ AH+PFT P      L   +
Sbjct: 437 CADLLEMRGAVLRDPAVFSFLWVVDFPLFLAKEESPTELESAHHPFTAPNSSDIHLLYTE 496

Query: 474 LLSIKAFQ 481
              +  + 
Sbjct: 497 PEKVLTYS 504


>gi|83769100|dbj|BAE59237.1| unnamed protein product [Aspergillus oryzae]
          Length = 677

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 180/613 (29%), Positives = 277/613 (45%), Gaps = 49/613 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRD---HYGITQVVANPDSACFEIAKSVRS 67
           L  +     V L G++   +     + F+ + D    + I  V    +    E  K+VR+
Sbjct: 83  LSQATPDEEVVLHGYLGVRKDLSKKLAFVRLTDPTMRHSIQLVSLAKNG-ALEKLKAVRA 141

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
              + + G V ++ A+       T   E+    I  L+       P     +       K
Sbjct: 142 NSPVAVRGKVKAKQAKGSEME-KTDPWEIQVDDIRTLN-----DFPSDIIMKSDTVFPPK 195

Query: 128 YRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVPS 184
            RFL LR D  L   +  R ++ N  +  +      F+E  TP+L  S+PEGAR+FLVP+
Sbjct: 196 QRFLQLRSDSELRDALRFRAQVHNVCKEELEQCRPPFVEIETPLLFKSTPEGAREFLVPT 255

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R  +G  YALPQ+PQQYKQ+LMASG  RYFQ A CFRDED R+DR P EF QLDMEMSF 
Sbjct: 256 R-KRGLAYALPQSPQQYKQILMASGIPRYFQFARCFRDEDLRADRQP-EFTQLDMEMSFA 313

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             +D++ T+E ++R ++         S  F R+ Y DA+ RYG+DKPD R  + +  + E
Sbjct: 314 TGEDVMRTVEGIIRRLWSTLMKDPAPSGPFQRMSYQDAMSRYGSDKPDTRFGMEISRI-E 372

Query: 305 HFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA------RSQGQPGL 356
           H +  +   ++    L +   +++          +      ++  A        +G PG+
Sbjct: 373 HLLPVDLVSKITPLTLPIVEVFKLENNENDPAAMSEFISQFLDSPAGVPFNNNPEGGPGI 432

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA--- 413
               +  D    + G+ P          E +   L++  GD     A +   F   +   
Sbjct: 433 ----FVYDAKKPLCGLQP----FGFEAAEYLEELLELDHGDLIVIQAREKAPFSGGSTPI 484

Query: 414 ADARNHI---AQELGIIN-CNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMP 462
            D R  +   A   G       F+F WI+DFP +  + + +        I   H+PFT P
Sbjct: 485 GDLRRALHSAAVSSGFKPAPTGFDFRWIVDFPLFSPSSDSEPGQGGAAGISSTHHPFTAP 544

Query: 463 Q-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           +      L   D   + A  YDLV NG E+  G  R H + V      ++          
Sbjct: 545 KTAADVDLLLTDPTKVVADHYDLVVNGVELGGGSRRIHDATVQEFILRDILQMPAERLAD 604

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVS 580
           F  L  A + G PPH G+A G DR+V ++LG ++VR+V  FP       D ++ +PS ++
Sbjct: 605 FSHLLEALRAGCPPHAGLALGFDRLVAVMLGKESVRDVIAFPKIGKVGEDPMVKAPSVMT 664

Query: 581 VEQLRELGLRIVE 593
            E L    L++ E
Sbjct: 665 EEALETYHLQLKE 677


>gi|295668186|ref|XP_002794642.1| aspartyl-tRNA synthetase, mitochondrial [Paracoccidioides
           brasiliensis Pb01]
 gi|226286058|gb|EEH41624.1| aspartyl-tRNA synthetase, mitochondrial [Paracoccidioides
           brasiliensis Pb01]
          Length = 685

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 183/615 (29%), Positives = 278/615 (45%), Gaps = 56/615 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGG-IIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +G  V L G++ +    G  + F+ + D       QV+A   +  FE  KS+ +   + +
Sbjct: 88  LGKHVVLHGYLGKRVDMGKKMAFVRLTDPTLSHNVQVIAFAKNISFEKLKSIEANSPVVV 147

Query: 74  DGLVMSRSAETINANIITGQ--------IELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            G+V  + A +       G+        IE++ + I  L+       P            
Sbjct: 148 QGIVQQKQASSK--EKAAGERDNSNVDSIEIALEDIYCLNE-----FPKDIIMTSETVFP 200

Query: 126 FKYRFLDLRRDTLHKNIV-KRTRIINSMRCRM--IAENFIECSTPILTASSPEGARDFLV 182
            + R L +R D+  +  +  R R  N +R  +      F+E  TP+L  S+PEGAR+FLV
Sbjct: 201 AEKRHLQIRADSNLRGALQFRARARNVLRETLEDFQPPFLEIETPLLFKSTPEGAREFLV 260

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           P+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMS
Sbjct: 261 PTR-RRGLAYALPQSPQQYKQILMASGIHRYYQFARCFRDEDLRADRQP-EFTQLDLEMS 318

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F   +D++  +E  ++ ++           +F R  Y++A+ +YG+DKPD+R  + +  +
Sbjct: 319 FATGEDVMKIIEAAMKRLWSTLMPAPLTPESFPRTTYENAMAKYGSDKPDVRIGMEIKRI 378

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNE-------WARSQGQP 354
            EH +  +  V       NP  E   +   G     R F     +           +G P
Sbjct: 379 -EHMIPVD-LVSKISPLNNPIVEAMKLEGNGDSDEMRKFLSSFMDSPTSSWFHNNPEGGP 436

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF-- 412
           G A+++   D    ++G+ P         T  +   L+++DGD     A +   F     
Sbjct: 437 G-AFVY---DSRKPLSGLQP----FGFEATWVLEQELNLKDGDLLLIQARNNAPFSGSST 488

Query: 413 -AADARNHI---AQELGIIN-CNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFT 460
              + R  I   A E         F F W+  FP +    + +        I   H+PFT
Sbjct: 489 PLGNLRREIHRAAVEANFTPAPTGFHFLWVAGFPLFSPVSDSEPGQGGAAGITSTHHPFT 548

Query: 461 MP-QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
            P      SL   D     A  YDLV NG E+  G  R H + V      ++        
Sbjct: 549 APLHESDISLLLTDPTKAVADHYDLVLNGVELGGGSRRIHSAAVQDFILRDILKMPAERL 608

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
             F  L  A + G PPH GIA G DR+V ++LG ++VR+V  FP S    DLL+  PS +
Sbjct: 609 ADFAHLLEALRAGCPPHAGIALGFDRLVAVMLGRESVRDVIAFPKSGKGEDLLVKCPSEM 668

Query: 580 SVEQLRELGLRIVEN 594
           + + LR   L +   
Sbjct: 669 TEDSLRTYHLSLRGK 683


>gi|260946821|ref|XP_002617708.1| hypothetical protein CLUG_03152 [Clavispora lusitaniae ATCC 42720]
 gi|238849562|gb|EEQ39026.1| hypothetical protein CLUG_03152 [Clavispora lusitaniae ATCC 42720]
          Length = 672

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 184/651 (28%), Positives = 290/651 (44%), Gaps = 84/651 (12%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRV-RPHGGIIFLDIRDHYG-ITQVVANPDSAC---FE 60
           TH+  DL        V + G ++R  R      F ++RD  G I Q+   P+      FE
Sbjct: 35  THNVKDLQKPTSDQ-VTVHGHLNRKPRIMAKRSFAELRDPNGDIIQIYMAPEVTNEKYFE 93

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             +   +E  + + G V  +  +    +    Q+EL     + L+ A      +   +  
Sbjct: 94  RLEKSGAEDSVSVTGYVQEKKGKDDRPD-APKQLELVVSHFQTLNPAGVEAGRLDKLKHS 152

Query: 121 -PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGAR 178
            P  +  KYRFL LR     K +  R++ +N +R  ++  + F+E  TP+L  S+PEGAR
Sbjct: 153 NPSELPPKYRFLQLRTPFYQKTLRLRSKAVNEVRRVLVENHDFVEIETPLLFKSTPEGAR 212

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +FLVP+R     FYALPQ+PQQYKQ+LM+SGF RYFQIA CFRDED R+DR P EF Q+D
Sbjct: 213 EFLVPTRA-PDRFYALPQSPQQYKQILMSSGFTRYFQIARCFRDEDLRADRQP-EFTQVD 270

Query: 239 MEMSFVEQDD-ILNTMENVLRGVFEEFS-------------------NGNTVSNNFLRIC 278
           +EMSFV   D +   ++++++ V+ +                     N +     F ++ 
Sbjct: 271 LEMSFVNHTDQVSTVIDDIIQSVWNKVGGLPIYKVDDDGTMVEVDFENHDHSKPAFNKLS 330

Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
           Y +A+ +YG DKPDLR+ +   ++++H        F    +      V A   KG     
Sbjct: 331 YIEALSKYGIDKPDLRSALAFLDISKH--------FKPTKNTKDFGVVEACVLKGAFDPE 382

Query: 339 AFCDRMNEWARSQGQPGLAYIF--WRLDESGNVAGMGPVAKHL----NIVNTEAIRVRLD 392
                 +    S   P    I    + +E         V K++       ++E +   L+
Sbjct: 383 KPFKVPHALTDSINYPKRKPIVLAIKTEEDTVSWYEKFVDKNVLKPTENFSSEDLEKTLN 442

Query: 393 MQDGDSCFFIAGDPLKFCSF--AADARNHIAQELGIINCNCFE----------------- 433
           +Q GD   F     L + +       R    ++      N +                  
Sbjct: 443 LQPGDILAFSTRAELPYENPTPLGKFRQLAIEQF----PNKWNRPILRNGKVTTDYDRNS 498

Query: 434 -FC--WIMDFPFYEWNE------------EEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            F   W++DFP +   E            +  +++  H+PFTM +     L   D L + 
Sbjct: 499 TFVGSWLVDFPLFSPVEVSDSNDTEFPVYDMSQLEATHHPFTMAKSEDYELLATDPLKVH 558

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              YDLV NG E+  G  R H  E+    F ++       EN FG L +A   G PPH G
Sbjct: 559 GEHYDLVINGVEVGGGSRRVHDPELQKYIFESILKINN-YENLFGHLLKALSMGCPPHAG 617

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           IA G DR+  +L+G+ ++R+V  FP +Q+  D ++ SP+ V    L +  +
Sbjct: 618 IALGFDRLCAMLVGSASIRDVIAFPKNQSGTDPVVESPTDVPDSTLHQYNI 668


>gi|312214535|emb|CBX94526.1| similar to aspartyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 683

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 177/611 (28%), Positives = 282/611 (46%), Gaps = 50/611 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDH---YGITQVVANPDSACFEIAK--SV 65
           L    +GS   L G++   R     + F  +R+    + +  V +   +     A+  S+
Sbjct: 94  LEKIPLGSEFTLVGYLGSRRDVSQKLSFTMLRNENLSWCVQLVSSTSTTEAEAHARLRSL 153

Query: 66  RSEWVLCIDGLVMSRSAETINANI---ITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++   + + G++  R       +    + G  E++   +E ++   +  +          
Sbjct: 154 KNWTPVVVTGILKERQPPKQATHQGMKLVGTREIAVTHVEPINEVSKDLIITEE-----T 208

Query: 123 SIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 R L LR D  L  NI  R R   + R  +   N +E  TPIL  S+PEGAR+FL
Sbjct: 209 VFGPDQRHLQLRADSRLRNNIFLRDRAGRAARKVLAENNLVEVETPILFKSTPEGAREFL 268

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R  +G  YALPQ+PQQYKQ+LMASG  +YFQ A CFRDED R+DR P EF QLDMEM
Sbjct: 269 VPTR-QKGLAYALPQSPQQYKQILMASGITKYFQFARCFRDEDLRADRQP-EFTQLDMEM 326

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F  ++D++NT+E +L  ++++  +  ++   F R+ Y++A+  YG+DKPDLR     + 
Sbjct: 327 AFAGEEDVMNTIELLLADLWDK-MDLGSIPTKFQRMTYEEAMSSYGSDKPDLRYEAKANL 385

Query: 302 VTEHFVHSEFRV--FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
           + +     +  V      +S +P      + +          D  N      GQPG+   
Sbjct: 386 IGKITPLQDPIVEAVKIPVSSDPKTTRKFVSSFLDSP-----DGKNFLENPNGQPGI--- 437

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC---SFAADA 416
            +  D S  + G+GP+     +   EA+     +++G+     A          +   + 
Sbjct: 438 -FIGDLSQPMQGLGPLGYQYVMEGPEALA----VENGELLVLQARPNAPLSGGSTALGNL 492

Query: 417 RNHIAQEL---GIINC---NCFEFCWIMDFPFYEWNEE-------EKKIDFAHNPFTMPQ 463
           R  + +      +I     + F F WI DFP +  + +              H+PFT P+
Sbjct: 493 RLALYKAAISQDLIEAPAADDFRFLWITDFPLFTPSNDSDPGQGGTAGFSSTHHPFTAPK 552

Query: 464 -GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
                 L        KA  YD+V NG E+  G  R H + V    F ++   K      F
Sbjct: 553 TPADVELLLTAPEKAKAAHYDIVLNGVELGGGSRRIHNAAVQEFIFRDILKMKYERIEDF 612

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
             L    + G PPH GIA G DR++ ++ G ++VR+V +FP S    DLL+ SP+ V+ E
Sbjct: 613 RHLLDVLRSGCPPHAGIALGWDRLMAVMTGTESVRDVIVFPKSGKGEDLLVKSPNCVTRE 672

Query: 583 QLRELGLRIVE 593
           Q     L + E
Sbjct: 673 QWDTYHLSVKE 683


>gi|50310079|ref|XP_455053.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644188|emb|CAH00140.1| KLLA0E24465p [Kluyveromyces lactis]
          Length = 645

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 185/616 (30%), Positives = 276/616 (44%), Gaps = 65/616 (10%)

Query: 20  FVRLSGWVHRVRPH--GGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
            V L+GW+          +IF  +RD  G    + +  S      K  + E V+ I G +
Sbjct: 46  KVVLNGWIDAKPKKVGKNLIFGTLRDPNGEKIQLVDSQS----FLKESQVEDVVQIIGEL 101

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
             +     +   I  + EL   +++ L+ A + P  +   +    +   +YR+L LR   
Sbjct: 102 SEKKQTQQSTVNI--EYELKIIELQKLNQANKKPSQLQDLKADDGAFPPEYRYLQLRLPK 159

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR---VNQGSFYAL 194
              N+  R     ++R  + + NF E  TP+L  S+PEGAR+FLVP+R     + SFYAL
Sbjct: 160 YQNNLKLRYEASKNVRTVLDSLNFTEVETPLLFKSTPEGAREFLVPTRGKIDGEASFYAL 219

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
           PQ+PQQYKQLL+ASG +RYFQ+A CFRDED RSDR P EF Q+D+EM+F    D+   +E
Sbjct: 220 PQSPQQYKQLLIASGVNRYFQVARCFRDEDLRSDRQP-EFTQVDLEMAFSSGKDVREVVE 278

Query: 255 NVLRGVFEEFSNGNTVSNNFLR---------------ICYDDAIRRYGTDKPDLRNP-II 298
            V+   + +     T  +   R               + Y   + +YG DKPDLR P + 
Sbjct: 279 KVITSTWNKLHASGTDLHTLDRTGKIIPVSGTEKIINLTYQQVMTQYGIDKPDLRYPDLK 338

Query: 299 MHNVTEH----FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354
           + +++E     + + EF VF  I+       V          +    D  N        P
Sbjct: 339 LMDLSEFKAYGYTNKEFPVFEVIVLRKAFETVEEFHRDWSYLSNK--DNYN-----YRAP 391

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC---- 410
            +  I      +       P+A      N + I   L+++ GD       +P +      
Sbjct: 392 IVVPIESDELGTSWFTKFLPIAAF---ENPKLITKFLNLRKGDIIIGSTREPSRRLFENP 448

Query: 411 SFAADARNHI-----AQELGIINCNCFEFCWIMDFPFYEWNEE------------EKKID 453
           +    AR  I      +EL     +     W++DFP +   EE            E    
Sbjct: 449 TPLGRARQLITQSKRGKEL-FRKTDASVAAWVVDFPLFAPVEETAEKGSHYPVYTENAFS 507

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
             H+PFTM      +   +D LS     YDLV NG E+  G  R H  E+    F  +  
Sbjct: 508 STHHPFTMVNLRDYNKLESDPLSCHGEHYDLVVNGVELGGGSTRIHDPELQNYIFHEILN 567

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLM 573
            K   E+ FG L  AF+ G PPH G A G DR+  +L G++++R+V  FP S +  D ++
Sbjct: 568 IKNP-EDLFGHLLNAFKMGTPPHAGFAIGFDRMCAMLCGSESIRDVIAFPKSISGVDKVV 626

Query: 574 GSPSTVSVEQLRELGL 589
           GSPSTV    L E  +
Sbjct: 627 GSPSTVPASTLDEYNI 642


>gi|156847162|ref|XP_001646466.1| hypothetical protein Kpol_1048p39 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117143|gb|EDO18608.1| hypothetical protein Kpol_1048p39 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 660

 Score =  369 bits (946), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 187/643 (29%), Positives = 297/643 (46%), Gaps = 68/643 (10%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPH--GGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           + +       +VG+ V ++GW+ R       G+IF ++RD  G    + + +S      K
Sbjct: 34  SITIEQAKSLEVGTKVVINGWLDRKPKKIGKGLIFGNLRDIDGNKIQIVDTNSK----LK 89

Query: 64  SVRSEWVLCIDGLV-MSRSAETINANIITGQI-ELSAQKIEILSVAEELPLPVFGEREYP 121
               E V+ I+G++ + + +   N+ + +G++ E+    I  L+ A E P  +   +   
Sbjct: 90  GGSVEDVVQIEGILGIKKDSNDNNSTLDSGKVYEIKLDDITTLNKANEKPSQLQDFKIKG 149

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +   +YR+L LR     K + KR  I   +R  + ++ F E  TPIL  S+PEGAR+FL
Sbjct: 150 -NYPPEYRYLQLRLPEYQKFLKKRYNISTRIREYLASKAFTEVETPILFKSTPEGAREFL 208

Query: 182 VPSRVNQGS-----FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           VP+R          FY+LPQ+PQQYKQLLMASG +RYFQIA CFRDED R+DR P EF Q
Sbjct: 209 VPTRKESTVGKLPLFYSLPQSPQQYKQLLMASGVNRYFQIAKCFRDEDLRADRQP-EFTQ 267

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT--------------VSNNFLRICYDDA 282
           +D+EM+F   +D++N +E ++  V++EF+                        R+ Y +A
Sbjct: 268 VDLEMAFSSGEDVMNVVEELIPSVWKEFAESGPLLTLNENDELVEVTKEQPAKRMTYKEA 327

Query: 283 IRRYGTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
           + +YG DKPDLR P + + +++E  VHS           N       +          + 
Sbjct: 328 MTKYGIDKPDLRAPNLQITDLSEFNVHSTQH-------KNFPVFEVMVLKNAFRNIEDYN 380

Query: 342 DRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNI---VNTEAIRVRLDMQDGDS 398
                 + S   P    I   + +      +    K L I    N + +   L+++ GD 
Sbjct: 381 KNWTHLSNSDNYPYRTPIVVPIAD--EETRLNWFEKFLTITDIENPKLVSNFLNLEKGDI 438

Query: 399 CFFIAGDPLKFC----SFAADAR-NHIAQELGIIN---CNCFEFCWIMDFPFYEWNE--- 447
                 +  +      +     R   +  +LG+            W++DFP +   E   
Sbjct: 439 ICGSTREKSESLFENPTPLGKLRQLVLETKLGVEKYASTRQDVASWVVDFPLFSPQEVET 498

Query: 448 -------------EEKKIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                        +E      H+PFTM +    E L  +D        YDLV +G E+  
Sbjct: 499 IPKDGTKLHFPQYKENSFTSTHHPFTMVRLQDYEKLSTDDPSQCLGQHYDLVVSGVELGG 558

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  R H  E+    F N+ +     EN FG L +AF+ G PPH G+A G DR+  ++ G 
Sbjct: 559 GSTRIHDPELQNYIFHNI-LKINDPENLFGHLLQAFKMGTPPHAGLAIGFDRMCAMVCGR 617

Query: 554 KNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            ++R+V  FP S +  D ++GSPSTV+ E L+   +   +  K
Sbjct: 618 NSIRDVIAFPKSISGSDTVVGSPSTVNEEILKMYNVEYFKKTK 660


>gi|70994380|ref|XP_751992.1| aspartyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66849626|gb|EAL89954.1| aspartyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
          Length = 680

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 172/612 (28%), Positives = 277/612 (45%), Gaps = 45/612 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRD---HYGITQVVANPDSACFEIAKSVRS 67
           L  +  G  V+L G++         + F  + D    + I  V    +S   E  +S+ +
Sbjct: 85  LANASAGQEVQLHGYLGPRSDLSKKLSFARLTDPTMKHSIQLVSFIKNSPL-EKLRSINA 143

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
              + + G+V  +  +  +        E+    I+ L+   +  +   G    PE     
Sbjct: 144 NSPVVVRGIVQPKKTKGSDTEQSDC-WEVHIADIDPLNEFPKDIIMTPGTAFAPE----- 197

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN---FIECSTPILTASSPEGARDFLVPS 184
           +R+L LR D+  ++ ++    + ++    + +    F+E  TP+L  S+PEGAR+FLVP+
Sbjct: 198 HRYLQLRSDSELRDALRFRAQVRNICREELEQCRPPFVEIETPLLFKSTPEGAREFLVPT 257

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMSF 
Sbjct: 258 R-RRGLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMSFA 315

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             +D++ T+E ++R ++         S  F R+ Y DA+ RYG+DKPD R  + +  + +
Sbjct: 316 TGEDVMRTVEGIIRRLWSSLMKDEAPSGPFRRMPYQDAMSRYGSDKPDTRYGMEIFKI-D 374

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW------ARSQGQPGLAY 358
           + +  +  + +KI  +                  A  + + ++      A     P    
Sbjct: 375 YLLPVD--LVNKITPLTDPIIEAFKFEGNDNDPVATYEFIKQFLDSPAGAPFNNNPEGGP 432

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA---AD 415
             +  D    + G+ P          E I   LD   GD     A +   F   +    D
Sbjct: 433 GVFVYDAKKPLCGLQP----FGFEAAERIEELLDPDHGDLIVIQARERAPFTGGSTPIGD 488

Query: 416 ARNHI---AQELGIIN-CNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMPQ- 463
            R  +   A   G       F+F W++DFP +  + + +        I   H+PFT P+ 
Sbjct: 489 LRRALHTAAVSSGFKPAPTGFDFLWVVDFPLFSPSSDSEPGQGGAAGISSTHHPFTAPKT 548

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                    D     A  YDLV NG E+  G  R H + V      ++   K      F 
Sbjct: 549 AADVDQLLTDPTKAVADHYDLVVNGVELGGGSRRIHDAAVQEFILRDILQMKPERLADFS 608

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVE 582
            L  A + G PPH G+A G DR+V ++LG ++VR+V  FP +     D ++ +PS ++ E
Sbjct: 609 HLLDALRAGCPPHAGLALGFDRLVAVMLGKESVRDVIAFPKTGKGGDDAMVKAPSMMTKE 668

Query: 583 QLRELGLRIVEN 594
            L    LR+ + 
Sbjct: 669 ALETYHLRLKDE 680


>gi|254572794|ref|XP_002493506.1| Mitochondrial aspartyl-tRNA synthetase, required for acylation of
           aspartyl-tRNA [Pichia pastoris GS115]
 gi|238033305|emb|CAY71327.1| Mitochondrial aspartyl-tRNA synthetase, required for acylation of
           aspartyl-tRNA [Pichia pastoris GS115]
 gi|328354669|emb|CCA41066.1| aspartyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 665

 Score =  367 bits (942), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 171/631 (27%), Positives = 286/631 (45%), Gaps = 55/631 (8%)

Query: 6   THSCGDLGVSD---VGSFVRLSGWVHRV--RPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           TH+ G + +S    +G  + L GW++    +    + F ++RD+ G    +   D     
Sbjct: 43  THTIGSVALSLEKYLGKEITLHGWMNSKPRKVSKRLAFGELRDYNGDITQIVIADEEM-- 100

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEELPLPVFGERE 119
           I+  ++ E  + + G +  R  +   +    G++ +L+  K++IL+ +  +P  +     
Sbjct: 101 ISLQLQLEDAIAVTGTISRRRPKKDQSEESVGKLWDLNVIKLQILNRSNLVPSQLKSLDV 160

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                  +YR+L LR       +  R + +  +R  + + +F E  TP+L  S+PEGA +
Sbjct: 161 ASPDYPPEYRYLQLRSKFFQDALKLRAKALQRVRSTLDSLSFTEIETPLLFKSTPEGANE 220

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FLVP+R  +  FYALPQ+PQQYKQLLMASG   Y+Q+A CFRDED R+DR P EF Q+D+
Sbjct: 221 FLVPTR-RKSYFYALPQSPQQYKQLLMASGVKSYYQVARCFRDEDLRADRQP-EFTQIDI 278

Query: 240 EMSFVEQDDILNTMENVLRGVFEEF----------SNGNTVSNNFLRICYDDAIRRYGTD 289
           EMSF +   + + +E V+  V+ +           ++    SN F  + Y   +  YG D
Sbjct: 279 EMSFADGKQVRHAVEQVVNNVWLDVKKSPLYVPFGTDQLVRSNEFPLMSYKSVLELYGID 338

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
           KPDLR+ +  H+++E         F       P +EV  +     G +    D + +   
Sbjct: 339 KPDLRSSLRFHDISEFTTRVANPDF-------PVFEVCVLKQAFEGSHYTIPDLLIQPDN 391

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
            + +    +      +  N          ++    E +  +L++Q GD         L +
Sbjct: 392 YKSRRPAMFAIKSTTDLNNWHQHFSEYADIDSSKLEELTAKLNLQPGDIITGADRAILPY 451

Query: 410 CSF--AADARNHIAQELGII--------NCNCFEFC----WIMDFPFYEWNEEE------ 449
            +       R    ++              +  +      W++DFP +   EE+      
Sbjct: 452 ENPTPLGRFRQLAIEQFPTKWRRTVANSEEDTLKDLSVATWVVDFPLFNPVEEDQLSGKQ 511

Query: 450 -------KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
                   + +  H+PFTM       L   D L++    YDLV NG E+  G  R H S 
Sbjct: 512 SYPLYKKNQYESTHHPFTMCSPADYDLLSTDPLAVHGEHYDLVVNGVEVGGGSRRIHDSN 571

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +    F  + +  +     FG L  AF+ G PPH G A G DR+  +LLG+ ++R+V  F
Sbjct: 572 LQQYIFKEI-LGIQDPHRLFGHLLGAFESGCPPHAGFAIGFDRLCAMLLGSTSIRDVIAF 630

Query: 563 PMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           P +Q   D +  SPS V  + L +  +R +E
Sbjct: 631 PKNQKGRDPVTESPSMVPSKTLEKYHIREIE 661


>gi|159125095|gb|EDP50212.1| aspartyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
          Length = 680

 Score =  367 bits (942), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 172/612 (28%), Positives = 277/612 (45%), Gaps = 45/612 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRD---HYGITQVVANPDSACFEIAKSVRS 67
           L  +  G  V+L G++         + F  + D    + I  V    +S   E  +S+ +
Sbjct: 85  LTNASAGQEVQLHGYLGPRSDLSKKLSFARLTDPTMKHSIQLVSFIKNSPL-EKLRSINA 143

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
              + + G+V  +  +  +        E+    I+ L+   +  +   G    PE     
Sbjct: 144 NSPVVVRGIVQPKKTKGSDTEQSDC-WEVHIADIDPLNEFPKDIIMTPGTAFAPE----- 197

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN---FIECSTPILTASSPEGARDFLVPS 184
           +R+L LR D+  ++ ++    + ++    + +    F+E  TP+L  S+PEGAR+FLVP+
Sbjct: 198 HRYLQLRSDSELRDALRFRAQVRNICREELEQCRPPFVEIETPLLFKSTPEGAREFLVPT 257

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMSF 
Sbjct: 258 R-RRGLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMSFA 315

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             +D++ T+E ++R ++         S  F R+ Y DA+ RYG+DKPD R  + +  + +
Sbjct: 316 TGEDVMRTVEGIIRRLWSSLMKDEAPSGPFRRMAYQDAMSRYGSDKPDTRYGMEIFKI-D 374

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW------ARSQGQPGLAY 358
           + +  +  + +KI  +                  A  + + ++      A     P    
Sbjct: 375 YLLPVD--LVNKITPLTDPIIEAFKFEGNDNDPVATYEFIKQFLDSPAGAPFNNNPEGGP 432

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA---AD 415
             +  D    + G+ P          E I   LD   GD     A +   F   +    D
Sbjct: 433 GVFVYDAKKPLCGLQP----FGFEAAERIEELLDPDHGDLIVIQARERAPFTGGSTPIGD 488

Query: 416 ARNHI---AQELGIIN-CNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMPQ- 463
            R  +   A   G       F+F W++DFP +  + + +        I   H+PFT P+ 
Sbjct: 489 LRRALHTAAVSSGFKPAPTGFDFLWVVDFPLFSPSSDSEPGQGGAAGISSTHHPFTAPKT 548

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                    D     A  YDLV NG E+  G  R H + V      ++   K      F 
Sbjct: 549 AADVDQLLTDPTKAVADHYDLVVNGVELGGGSRRIHDAAVQEFILRDILQMKPERLADFS 608

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVE 582
            L  A + G PPH G+A G DR+V ++LG ++VR+V  FP +     D ++ +PS ++ E
Sbjct: 609 HLLDALRAGCPPHAGLALGFDRLVAVMLGKESVRDVIAFPKTGKGGDDAMVKAPSMMTKE 668

Query: 583 QLRELGLRIVEN 594
            L    LR+ + 
Sbjct: 669 ALETYHLRLKDE 680


>gi|255936415|ref|XP_002559234.1| Pc13g08090 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583854|emb|CAP91878.1| Pc13g08090 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 682

 Score =  367 bits (942), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 174/612 (28%), Positives = 269/612 (43%), Gaps = 49/612 (8%)

Query: 15  SDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHY--GITQVVANPDSACFEIAKSVRSEWVL 71
           ++  + V L G++         + F+ + D       QVVA   +  FE  K++ +   +
Sbjct: 87  AEANTEVVLHGYLGNRADLSKKLSFVRLSDPTLQQSLQVVAFAKNDAFEQLKTINANSPV 146

Query: 72  CIDGLVMSR----SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
            + G V  +     +E  N      Q EL+ ++I  L+       P             +
Sbjct: 147 AVRGTVQKKKKTKPSEGDNTP-AQDQWELALEEIHPLN-----DFPKEIIMTAETVFPPE 200

Query: 128 YRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGARDFLVPS 184
            R+L LR D  L K +  R R  N  +  +      F+E  TP+L  S+PEGAR+F+VP+
Sbjct: 201 QRYLQLRSDAELRKALRFRARAHNLCKKELEQCRPPFVEIETPLLFKSTPEGAREFIVPT 260

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLDMEMSF 
Sbjct: 261 R-REGLAYALPQSPQQYKQILMASGLPRYYQFARCFRDEDLRADRQP-EFTQLDMEMSFA 318

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             DD++ T+E V+R ++            F ++ Y + + +YG+DKPD R  + +  + +
Sbjct: 319 TGDDVMRTVEGVIRRLWSSLMKDPAPEGPFRKVSYQEVMAKYGSDKPDTRYGMEIIRL-D 377

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGG--GGNRAFCDRMNEWARSQGQP-----GLA 357
           H +  +  V       NP  E + +            F  +  +     G P        
Sbjct: 378 HVLPVD-LVSKISGLTNPVVEAFKLEGNDNDPAETHKFITQFLD--SPAGAPFNDNPDGG 434

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA---A 414
              +  +    + G+ P          E +   LD   GD     A     F   +    
Sbjct: 435 PGVFIYNGKQPLCGLQP----FGFEAAEQVEELLDPDHGDLIILQARPRAPFSGGSTPVG 490

Query: 415 DARNHIAQEL----GIINCNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMPQ 463
           D R  +               F+F W++ FP +    + +            H+PFT P+
Sbjct: 491 DLRRALHAASVTAGFKPAPTGFDFLWVVGFPLFSPTSDSEPGQGGAAGFSSTHHPFTAPK 550

Query: 464 -GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
                 L   D     A  YDLV NG E+  G  R H + V    F ++          F
Sbjct: 551 TPADVDLLLTDPTKAVADHYDLVVNGVELGGGSRRIHDAAVQEFIFRDILKMPAERLADF 610

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSV 581
             L  A + G PPH G+A G DR+V ++LG ++VR+V  FP +     D ++G+PS ++ 
Sbjct: 611 SHLLDALRSGCPPHAGLALGFDRLVAVMLGKESVRDVIAFPKTGKGGDDAMVGAPSLMTE 670

Query: 582 EQLRELGLRIVE 593
           E L+   L++ +
Sbjct: 671 EALKTYHLKLRQ 682


>gi|167464001|ref|ZP_02329090.1| aspartyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 358

 Score =  367 bits (941), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 124/360 (34%), Positives = 189/360 (52%), Gaps = 7/360 (1%)

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+E SF+ QD +L+ ME ++  +  E      VS  F R+ Y +A+ +YG+DKPDLR  +
Sbjct: 1   DIETSFLSQDQLLDMMEELMVKLVRETVGVE-VSRPFQRLTYAEAMDKYGSDKPDLRFGM 59

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            + +++     SE +VFS  L      +       G   +R   D +  +A   G  GLA
Sbjct: 60  ELVDLSGLLADSEAKVFSAALKTGGEVKALNAKGCGT-WSRKEIDDLAPFAMRYGAKGLA 118

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +I  +  +       GP+ K ++     AIR RL  ++GD   F A           + R
Sbjct: 119 WIQIKEGQ-----MKGPIVKFMSEEEQTAIRERLRAEEGDLLLFSADTKKIVADVLGNLR 173

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             I + LG+I+ + F+F W++DFP   ++EE+K+    H+PFT P+     L  +D   I
Sbjct: 174 LKIGRRLGLIDDSIFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKDEDLDLFDSDPGQI 233

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +   YDLV NG+E+  G  R    +V  + F  +G S+E  +++FG L  AF+ G PPHG
Sbjct: 234 RGQAYDLVLNGYEVGGGSQRIFKRDVQEKMFKALGFSQEEAKDKFGYLLDAFEYGTPPHG 293

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
           GIA G DR+VMLL G  N+RE   FP + +   LLM +P  V   QL +L ++I+   KK
Sbjct: 294 GIAFGFDRLVMLLAGRSNLRETIAFPKTASATCLLMDAPGEVDAGQLEQLSIKIMGKRKK 353


>gi|254584564|ref|XP_002497850.1| ZYRO0F14938p [Zygosaccharomyces rouxii]
 gi|238940743|emb|CAR28917.1| ZYRO0F14938p [Zygosaccharomyces rouxii]
          Length = 655

 Score =  367 bits (941), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 182/617 (29%), Positives = 286/617 (46%), Gaps = 64/617 (10%)

Query: 16  DVGSFVRLSGWVHRV-RPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + G  V ++GW+ +  R  G  +IF +IRD  G    V +  S      K+   E V+ +
Sbjct: 56  NPGDKVVINGWIDKKPRKIGKELIFGEIRDSQGDVIQVVDSQS----FLKNAAVEDVVQV 111

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +  +  +   ++     +EL  + +  L+ A++    +   +    +   +YR+L L
Sbjct: 112 QGSLALKKGK--KSDEPKTSLELKLESVATLNGADKRAADLQDFKTKG-AYPPEYRYLQL 168

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS--- 190
           R     + +  R ++  ++R +     F E  TPIL  S+PEGAR+FLVP+R        
Sbjct: 169 RLPKFQQFLQTRYQLSKALRQKFDELGFTEIETPILFKSTPEGAREFLVPTRRTTTDEEP 228

Query: 191 -FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            FYALPQ+PQQYKQLLMASG +RYFQ+A CFRDED R+DR P EF QLD+EM+F   +D+
Sbjct: 229 TFYALPQSPQQYKQLLMASGINRYFQVAKCFRDEDLRADRQP-EFTQLDLEMAFANGEDV 287

Query: 250 LNTMENVLRGVFEEFSNGNT------------VSNNFLRICYDDAIRRYGTDKPDLRNP- 296
           + ++E  +  V+++ S G               S     + Y  A+ +YG DKPDL  P 
Sbjct: 288 MQSVEEAVTFVWKKLSRGLYTLDIQGNVVPVSESQPVRHMSYRQAMSQYGIDKPDLCAPD 347

Query: 297 IIMHNVTEH----FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
           + + +++E          F +F  ++  N   +      K      +F      +  +  
Sbjct: 348 LKILDLSEFRALGNSDKSFPIFEVLILRNAFDDKKDFNKK-----WSFLKNPEHY--NYR 400

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL----K 408
            P +  I    D+S  V     +A      N + +   LD+Q GD         +    +
Sbjct: 401 TPKVVPILNEQDKSQWVDQFLDIAFF---ENPKLVAKALDLQPGDIICGSTRQDILKLFE 457

Query: 409 FCSFAADARNHI----AQELGIINCNCFEFCWIMDFPFYEWNE------------EEKKI 452
             +     R  +    A +  +I+ +     WI DFP +   E            EE ++
Sbjct: 458 NPTPLGKLRQLVMKSNAYKDKLIDQDV--AVWIKDFPLFSPVEKESSNNFEYPEYEEDRV 515

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
           + +H+PFTM Q    +  G +        YDLV NG E+  G  R H  ++    F  + 
Sbjct: 516 ESSHHPFTMVQIRDYAKLGTNPTQALGQHYDLVVNGVELGGGSTRVHDPQLQEYIFEEIL 575

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
             K      FG L  AF+ G PPH G A G DR+  +L G +++R+V  FP S    DL+
Sbjct: 576 KIK-EPHKVFGHLLEAFKMGTPPHAGFAIGFDRMCAMLCGTESIRDVMAFPKSVTGSDLV 634

Query: 573 MGSPSTVSVEQLRELGL 589
           +GSPSTV  E L +  +
Sbjct: 635 VGSPSTVKNEALEQYNV 651


>gi|146422591|ref|XP_001487231.1| hypothetical protein PGUG_00608 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 687

 Score =  367 bits (941), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 187/654 (28%), Positives = 297/654 (45%), Gaps = 84/654 (12%)

Query: 6   THSCGDLGVS-----DVGSFVRLSGWVHRV-RPHGGIIFLDIRDHYG-ITQVVANPDSAC 58
           THS   +  +     D    + L G ++R  R    I F ++RD  G   Q++  PD   
Sbjct: 52  THSIQAITSNLDSYLDNKDVIVLHGHLNRTPRIRSKISFAELRDVSGDTVQLILMPDRTP 111

Query: 59  ---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI---ELSAQKIEILSVAEELPL 112
              F+I     +E  +C+ G V  +        ++ G++   EL    I++L++A E   
Sbjct: 112 PEYFDILSKTSTEDSICVSGTVQLK-------KLVAGELRKWELVITSIQLLNLANEEAA 164

Query: 113 PVFGEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILT 170
            +   +   P  +   YRFL LR   L KN+  R+++   +R  +    NF E  TP+L 
Sbjct: 165 RLDKLKHSDPNKLPPHYRFLQLRTKELQKNLRTRSKMAAVVRHVLGEKHNFTEIETPLLF 224

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            S+PEGAR+FLVP+R +   FYALPQ+PQQYKQ+LM+SGF RY+Q+A CFRDED R+DR 
Sbjct: 225 KSTPEGAREFLVPTR-SPNKFYALPQSPQQYKQILMSSGFTRYYQLAKCFRDEDLRADRQ 283

Query: 231 PGEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEFS----------------NGNTVSNN 273
           P EF Q+D+EMSF+   D +L  +E+V+ G+    +                  N  S +
Sbjct: 284 P-EFTQVDLEMSFISHSDQVLCVVEDVIYGICNNVASKPVYTLNEDGYIIEAQKNGTSPS 342

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           F ++ Y  A+ +YG DKPDLR+ +   N++ +        F  +   +    + A   KG
Sbjct: 343 FYKLSYKSALEKYGIDKPDLRSSLQFVNLSSY--------FKPVNCPDEFNIIEACILKG 394

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKH-----LNIVNTEAIR 388
                A CD  +           A     +  S        + K      ++  + + + 
Sbjct: 395 ALAKCAHCDIPDSLTNPDNYSRRAPSIIPITNSSATTWFETLTKDGVMVPVDSFDPQKLN 454

Query: 389 VRLDMQDGDSCFFIAGDPLKFCSF--AADAR-NHIAQ-----ELGIINC---------NC 431
             L +++GD           + +       R   +A+     +  +I+          + 
Sbjct: 455 ELLGLEEGDIIAISNRSEHPYENPTPLGRFRNLAMAEYPDKWKRKLIDSSGNTSVPPSDA 514

Query: 432 FEFCWIMDFPFYEWNEEEKKI------------DFAHNPFTMPQGGMESLKGNDLLSIKA 479
           F  CW+ DFP +  +EE                +  H+PFTM +    SL  +D      
Sbjct: 515 FVSCWVHDFPLFSPSEENSGSNDLYPKYNWDHRESTHHPFTMVKSEDYSLLESDPYLAHG 574

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG E+  G  R H   V       V   K    + FG L  A   G PPH G+
Sbjct: 575 EHYDLVINGVEVGGGSRRIHNPLVQQYVLEEVLKIKN-YNSLFGHLLEALSFGCPPHAGL 633

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G DR+  +++G +++R+V  FP +Q+  D ++ SPS V  E L +  ++ ++
Sbjct: 634 ALGFDRLCAMVVGTQSIRDVIAFPKNQSGVDPVVSSPSNVDSETLADYYIQTID 687


>gi|189202468|ref|XP_001937570.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187984669|gb|EDU50157.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 633

 Score =  366 bits (940), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 178/609 (29%), Positives = 288/609 (47%), Gaps = 51/609 (8%)

Query: 18  GSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFE---IAKSVRSEWVLCI 73
           G  V + G++   R     + F  +R   G   +     S   E     +S++    + +
Sbjct: 43  GEDVEVFGYLSTRRDVSSKLSFTMLRHKNGTQCIQLVSTSNNEESHAKIRSLKEWTPVIV 102

Query: 74  DGLVMSRSAETINANIITG---QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            G +M R     +  +      Q E++   I+ L+   ++   +  + +         R 
Sbjct: 103 KGKLMDRKPPKDDTYLDMKLEAQKEIAVAHIQPLN---DISNDIIIKNDT--VFGPHQRH 157

Query: 131 LDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           L LR D +  +N++ R+  +   R  + A  + E  TPIL  S+PEGAR+FLVP+R  +G
Sbjct: 158 LQLRTDNMLRQNLILRSEAMAKARLHLNAHMWKEIETPILFKSTPEGAREFLVPTR-QKG 216

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             YALPQ+PQQYKQ+LMASG  +Y+Q A CFRDED R DR P EF QLDMEM+F  ++++
Sbjct: 217 LAYALPQSPQQYKQILMASGITKYYQFARCFRDEDLRVDRQP-EFTQLDMEMAFAGEEEV 275

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           +  +E +L+ V++  +N   +   F R+ Y +A+  YG+DKPDLR    +H +T+H   +
Sbjct: 276 MEEIEQLLKEVWQHVNNVT-LRGKFQRMTYHEAMTSYGSDKPDLRFESKIHEITQHL--T 332

Query: 310 EFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFC-------DRMNEWARSQGQPGLAYIFW 361
              +       NP  +   I  ++     R F        D       + GQPG+    +
Sbjct: 333 SDLIGKITSLQNPAIDAIKISISEDPKVTRKFIASFLDSPDGKPYLDNADGQPGI----F 388

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC---SFAADARN 418
             D S  + G+GP+     +   E++     +++GD     A     F    +   + R 
Sbjct: 389 IGDLSQPMQGLGPLGYQYVMEGPESLA----VENGDVLVLQARPNAPFSGGSTMLGNLRL 444

Query: 419 HIAQEL---GIINC---NCFEFCWIMDFPFYEWNEE-------EKKIDFAHNPFTMPQ-G 464
            + +     G++     + ++F WI DFP +  + +       E      H+PFT P+  
Sbjct: 445 ALHKAAIAQGLMTAPENSDYKFVWITDFPLFTPSSDSEPGQGGEAGFSSTHHPFTAPKTP 504

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
               L   D  + KA  YD+V NG E+  G  R H + V    F ++   K      F  
Sbjct: 505 EDVELLLTDPSAAKAAHYDIVVNGVELGGGSRRIHSAAVQEFIFKDILKMKPERVEDFRH 564

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L    + G PPH GIA G DR++ +L   ++VR+V  FP S    DLL+ SP+ ++ +QL
Sbjct: 565 LLDVLRSGCPPHAGIALGWDRLMAVLCHRESVRDVIAFPKSGKGEDLLVKSPTRMTEDQL 624

Query: 585 RELGLRIVE 593
               L++ E
Sbjct: 625 STYHLQVKE 633


>gi|289428615|ref|ZP_06430299.1| putative aspartate--tRNA ligase [Propionibacterium acnes J165]
 gi|289158309|gb|EFD06528.1| putative aspartate--tRNA ligase [Propionibacterium acnes J165]
          Length = 387

 Score =  366 bits (939), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 134/386 (34%), Positives = 192/386 (49%), Gaps = 25/386 (6%)

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
           DED R+DR P EF QLD+EMSFV+QDD++   E  +   ++       +     RI + +
Sbjct: 1   DEDFRADRQP-EFTQLDVEMSFVDQDDVIALAEETMAACWKIIG--VDMPTPLPRITWHE 57

Query: 282 AIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
           A+ RYG+DKPDLR    +  VT+ F ++ FRVF         Y    +   G    R   
Sbjct: 58  AMDRYGSDKPDLRFGNEITEVTDFFANTAFRVFQAP------YVGAVVMPGGASLPRRQF 111

Query: 342 DRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
           D   EWAR++G  GLAYI      S      GPVAK+++      I  ++  + GD+ FF
Sbjct: 112 DAWQEWARTRGAKGLAYITI----SDEGVPEGPVAKNISEEEKAGIAEKVGAKPGDAIFF 167

Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKK 451
            AG           AR  I +   + + + + FCW++D P ++  +E             
Sbjct: 168 AAGSKTSSQELLGAARLEIGRRCELFDPSDWAFCWVVDAPLFKPTKEAEASGDVAVGTGA 227

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
               H+ FT P          D  S  A+ YD V NG E+  G IR H  +V  + F+ +
Sbjct: 228 WTAVHHAFTSPTPDCLDTFDTDPGSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVM 287

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI  E  + +FG L  AF+ G PPHGGIA G+DR+VMLL G + +R+V  FP + N  D 
Sbjct: 288 GIGPEEAQEKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGGFETIRDVIAFPKTGNGYDP 347

Query: 572 LMGSPSTVSVEQLRELGLRIVENPKK 597
           L  +P+ ++  Q RE G  +   PKK
Sbjct: 348 LTAAPAPITPAQRREAG--VDAKPKK 371


>gi|240281700|gb|EER45203.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 637

 Score =  365 bits (938), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 183/611 (29%), Positives = 285/611 (46%), Gaps = 50/611 (8%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCID 74
           G  V L G++ +    G  + F+ + D       Q++A   +  FE  KS+ +   + + 
Sbjct: 41  GKQVVLHGYLGKRVDMGKRMAFVRLTDPTLSQNVQIIAFAKNDSFEKLKSIEANSPVVVQ 100

Query: 75  GLVMSRSAETINA------NIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
           G+V  + A +            T  +E+S + I  L+       P             + 
Sbjct: 101 GVVQQKQASSKEKTAAEQDEAKTDCVEISLEDIHPLNE-----FPKDIIMTSDTVFPAEK 155

Query: 129 RFLDLRRD-TLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSR 185
           R L +R D  L   ++ R R  N +R  +      F+E  TP+L  S+PEGAR+FLVP+R
Sbjct: 156 RHLQIRTDSKLRDALLFRARARNVLREALEECQLPFVEIETPLLFKSTPEGAREFLVPTR 215

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMSF  
Sbjct: 216 -RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMSFAT 273

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            +D++  +E  ++ ++    +    S +F R+ Y DA+ +YG+DKPD+R  + +  + E+
Sbjct: 274 GEDVMAIIEAAVKRLWSSLMSEPLPSGSFPRLSYGDAMAKYGSDKPDVRIGMEIKRI-EN 332

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE-------WARSQGQPGLAY 358
            +  +       L       +     +     R F +   +           +G PG A+
Sbjct: 333 MIPVDLVSKISPLHNPIVEAIKLEGNENPEEMRKFLNSFMDSPEASSFHKNPEGGPG-AF 391

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC---SFAAD 415
           ++   D    ++G+ P         T  +   LD++DGD     A     F    +   D
Sbjct: 392 VY---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARKNAPFSGGSTPLGD 444

Query: 416 ARNHIAQE-LG---IINCNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMP-Q 463
            R  I +  +G   I +   F F W+ DFP +    + +        I   H+PFT P +
Sbjct: 445 LRREIHKAAVGATLISSPTGFHFLWVRDFPLFSPITDSEPGQGGAAGIASTHHPFTAPLR 504

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
               SL   D   + A  YDLV NG E+  G  R H + V      ++          F 
Sbjct: 505 KSDVSLLLTDPTKVIADHYDLVVNGVELGGGSRRIHSAAVQEFILRDILKMPADRLADFS 564

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            L  A + G PPH GIA G DR+V ++LG +++R+V  FP S    DLL+  PS ++ E 
Sbjct: 565 HLLEALRAGCPPHAGIALGFDRLVAVMLGKESLRDVIAFPKSGKGEDLLVKCPSEMTEES 624

Query: 584 LRELGLRIVEN 594
           LR   L++ ++
Sbjct: 625 LRTYHLQLRDD 635


>gi|190344765|gb|EDK36510.2| hypothetical protein PGUG_00608 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 687

 Score =  365 bits (937), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 187/654 (28%), Positives = 295/654 (45%), Gaps = 84/654 (12%)

Query: 6   THSCGDLGVS-----DVGSFVRLSGWVHRV-RPHGGIIFLDIRDHYG-ITQVVANPDSAC 58
           THS   +  +     D    + L G ++R  R    I F ++RD  G   Q++  PD   
Sbjct: 52  THSIQAITSNLDSYLDNKDVIVLHGHLNRTPRIRSKISFAELRDVSGDTVQLILMPDRTP 111

Query: 59  ---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQ---IELSAQKIEILSVAEELPL 112
              F+I     +E  +C+ G V  +        ++ G+    EL    I++L+ A E   
Sbjct: 112 PEYFDILSKTSTEDSICVSGTVQLK-------KLVAGESRKWELVITSIQLLNSANEEAA 164

Query: 113 PVFGEREY-PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILT 170
            +   +   P  +   YRFL LR   L KN+  R+++   +R  +    NF E  TP+L 
Sbjct: 165 RLDKLKHSDPNKLPPHYRFLQLRTKELQKNLRTRSKMAAVVRHVLGEKHNFTEIETPLLF 224

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            S+PEGAR+FLVP+R +   FYALPQ+PQQYKQ+LM+SGF RY+Q+A CFRDED R+DR 
Sbjct: 225 KSTPEGAREFLVPTR-SPNKFYALPQSPQQYKQILMSSGFTRYYQLAKCFRDEDLRADRQ 283

Query: 231 PGEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEFS----------------NGNTVSNN 273
           P EF Q+D+EMSF+   D +L  +E+V+ G+    +                  N  S +
Sbjct: 284 P-EFTQVDLEMSFISHSDQVLCVVEDVIYGICNNVASKPVYTLNEDGYIIEAQKNGTSPS 342

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           F ++ Y  A+ +YG DKPDLR+ +   N++ +        F  +   +    + A   KG
Sbjct: 343 FYKLSYKSALEKYGIDKPDLRSSLQFVNLSSY--------FKPVNCPDEFNIIEACILKG 394

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKH-----LNIVNTEAIR 388
                A CD  +           A     +  S        + K      ++  + + + 
Sbjct: 395 ALAKCAHCDIPDSLTNPDNYSRRAPSIIPITNSSATTWFETLTKDGVMVPVDSFDPQKLN 454

Query: 389 VRLDMQDGDSCFFIAGDPLKFCSF--AADAR-NHIAQ-----ELGIINC---------NC 431
             L +++GD           + +       R   +A+     +  +I+          + 
Sbjct: 455 ESLGLEEGDIIAISNRSEHPYENPTPLGRFRNLAMAEYPDKWKRKLIDSSGNTSVPPSDA 514

Query: 432 FEFCWIMDFPFYEWNEEEKKI------------DFAHNPFTMPQGGMESLKGNDLLSIKA 479
           F  CW+ DFP +  +EE                +  H+PFTM +    SL  +D      
Sbjct: 515 FVSCWVHDFPLFSPSEENSGSNDLYPKYNWDHRESTHHPFTMVKSEDYSLLESDPYLAHG 574

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YDLV NG E+  G  R H   V       V   K    + FG L  A   G PPH G+
Sbjct: 575 EHYDLVINGVEVGGGSRRIHNPLVQQYVLEEVLKIKN-YNSLFGHLLEALSFGCPPHAGL 633

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           A G DR+  +++G +++R+V  FP +Q+  D ++ SPS V  E L +  ++ ++
Sbjct: 634 ALGFDRLCAMVVGTQSIRDVIAFPKNQSGVDPVVSSPSNVDSETLADYYIQTID 687


>gi|327350748|gb|EGE79605.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 750

 Score =  365 bits (936), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 183/610 (30%), Positives = 278/610 (45%), Gaps = 45/610 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGG-IIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +G  V L G++ +    G  + F+ + D       Q++A      F   KS+ +   + +
Sbjct: 127 LGQKVVLHGYLGKRVDMGKRMAFVRLTDPILSQNVQIIAFAKDKSFAKLKSIEANSPVVV 186

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY----PESIRFKYR 129
            G+V  +              E  A  IEI    E++       ++           + R
Sbjct: 187 QGVVQQKQPSLKEKPDAREGQETKADSIEI--ALEDIHCLNEFPKDIIMTPDTVFPPEKR 244

Query: 130 FLDLRRD-TLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRV 186
            L +R D  L   +  R R  N +R  +      FIE  TP+L  S+PEGAR+FLVP+R 
Sbjct: 245 HLQIRADSKLRDALRFRARARNVLREALEECQLPFIEIETPLLFKSTPEGAREFLVPTR- 303

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMSF   
Sbjct: 304 RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMSFATG 362

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           +D++  +E  ++ ++      +  S +F R  Y+DA+ ++G+DKPD+R  + +  + EH 
Sbjct: 363 EDVITVIEAAVKKLWSSLMTHSLPSESFQRTTYEDAMAKFGSDKPDVRIGMEIKRI-EHM 421

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE-------WARSQGQPGLAYI 359
           V  +       L       +     +     R F +   +            G PG A++
Sbjct: 422 VPVDLVSKISPLHNPIVEAMKLEGNENPEDMRNFLNSFMDSPEASIFHKNPAGGPG-AFV 480

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC---SFAADA 416
           +   D    ++G+ P         T  +   LD++DGD     A +   F    +   D 
Sbjct: 481 Y---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARENAPFSGGSTPLGDL 533

Query: 417 RNHIAQ---ELGIIN-CNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMP-QG 464
           R  I +   E  +      F F W+ +FP +    + +        I   H+PFT P + 
Sbjct: 534 RREIHKAAVEADLTPAPTGFHFLWVQEFPLFSPITDSEPGQGGAAGIASTHHPFTAPLRE 593

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
              SL   D   + A  YDLV NG E+  G  R H + V      ++          F  
Sbjct: 594 SDISLLLTDPTKVIADHYDLVLNGVELGGGSRRIHSAAVQEFILRDILKMPAERLADFAH 653

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  A + G PPH GIA G DR+V ++LG ++VR+V  FP S    DLL+  PS ++ E L
Sbjct: 654 LLEALRAGCPPHAGIALGFDRLVAVMLGKESVRDVIAFPKSGKGEDLLIKCPSEMTEESL 713

Query: 585 RELGLRIVEN 594
           R   LR+ + 
Sbjct: 714 RTYHLRLRDE 723


>gi|45201302|ref|NP_986872.1| AGR206Cp [Ashbya gossypii ATCC 10895]
 gi|44986156|gb|AAS54696.1| AGR206Cp [Ashbya gossypii ATCC 10895]
          Length = 651

 Score =  364 bits (934), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 169/631 (26%), Positives = 263/631 (41%), Gaps = 60/631 (9%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRV-RPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           S  D+  S  G    ++GW+ R  R  G  ++F  +RD  G    + +  +    + K  
Sbjct: 37  SIEDVLSSTAGQPAIINGWIDRKPRKVGKGLVFGSLRDINGDKIQLVDSQA----LLKQS 92

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + I+G ++    + +  +  T + E+    +  L+        +  E +  ES  
Sbjct: 93  HVEDAVQIEGKLVQ---KRLKEDEKTPEYEIQLTSLRTLNGCNPKAAQMQ-ECKMSESYP 148

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            +YR L LR       +  R     ++R  +    F+E  TP+L  S+PEGAR+FLVP+R
Sbjct: 149 PEYRHLQLRLPAFQARMKMRHNASKTVRASLEKLGFMEVETPLLFKSTPEGAREFLVPTR 208

Query: 186 VNQGS---FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             QG    FYALPQ+PQQYKQLLMA G  +Y+Q+A CFRDED RSDR P EF Q+D+EM+
Sbjct: 209 HKQGKDPLFYALPQSPQQYKQLLMAGGVSKYYQLARCFRDEDLRSDRQP-EFTQVDLEMA 267

Query: 243 FVEQDDILNTMENVLRGVFEEFSN--------------GNTVSNNFLRICYDDAIRRYGT 288
           F   DD++  +E+ +   + E +                        R+ Y   + +YG 
Sbjct: 268 FANGDDVMRVVESTVLNTWNEVALSGKLHTLDKALNIVPCGPDTPVSRLTYHQVMTQYGI 327

Query: 289 DKPDLRN-PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
           DKPDLR   + + +++E  VH        +  +           +    +       NE+
Sbjct: 328 DKPDLRFKDLKIVDLSEFNVHGHMHKQFPVFEI-LILRNAFDTPEDFKKHWTHLSDPNEY 386

Query: 348 ARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407
             +  +P +  I     ES       P+A      N + +    D++ GD          
Sbjct: 387 --NYRKPIVVPITDTKLESNWFESFLPIANF---ENPKLVAKFFDLKQGDIVCGATRQRT 441

Query: 408 KFC----SFAADARNHI-----AQELGIINCNCFEFCWIMDFPFYEWNE----------- 447
                  +     R  +      +EL           W++DFP +   E           
Sbjct: 442 NELFENPTPLGRLRQLVIRSPRGKELYQSTDRDVA-SWVVDFPLFSPEEASGTETRKSEY 500

Query: 448 ---EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
              +  ++   H+PFTM +           LS     YD V NG E+  G  R H   + 
Sbjct: 501 PAYDASRLCSMHHPFTMVRLQDYQKLSEKPLSCLGQHYDFVVNGVELGGGSTRVHDPVLQ 560

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              F+ +       +  FG L  AF  G PPH G A G DR+V ++   +++R+V  FP 
Sbjct: 561 RYIFNQILKINNE-DQVFGHLLEAFSMGTPPHAGFAIGFDRMVAMMCAKESIRDVIAFPK 619

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           S    DLL+ SPS V    L    +  V   
Sbjct: 620 SVTGSDLLVRSPSVVPETTLAGYNIAPVPEK 650


>gi|261206066|ref|XP_002627770.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239592829|gb|EEQ75410.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 803

 Score =  364 bits (934), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 185/609 (30%), Positives = 279/609 (45%), Gaps = 43/609 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGG-IIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +G  V L G++ +    G  + F+ + D       Q++A      F   KS+ +   + +
Sbjct: 180 LGQKVVLHGYLGKRVDMGKRMAFVRLTDPILSQNVQIIAFAKDKSFAKLKSIEANSPVVV 239

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY----PESIRFKYR 129
            G+V  +              E  A  IEI    E++       ++           + R
Sbjct: 240 QGVVQQKQPSLKEKPDAREGQEAKADSIEI--ALEDIHCLNEFPKDIIMTPDTVFPPEKR 297

Query: 130 FLDLRRD-TLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRV 186
            L +R D  L   +  R R  N +R  +      FIE  TP+L  S+PEGAR+FLVP+R 
Sbjct: 298 HLQIRADSKLRDALRFRARARNVLREALEECQLPFIEIETPLLFKSTPEGAREFLVPTR- 356

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMSF   
Sbjct: 357 RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMSFATG 415

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           +D++  +E  ++ ++      +  S +F R  Y+DA+ ++G+DKPD+R  + +  + EH 
Sbjct: 416 EDVITVIEAAVKKLWSSLMTHSLPSESFQRTTYEDAMAKFGSDKPDVRIGMEIKRI-EHM 474

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS------QGQPGLAYIF 360
           V  +  V       NP  E  A+  +G        + +N +  S         P      
Sbjct: 475 VPVD-LVSKISPLHNPIVE--AMKLEGNENPEDMRNFLNSFMDSPEASIFHKNPAGGPGA 531

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC---SFAADAR 417
           +  D    ++G+ P         T  +   LD++DGD     A +   F    +   D R
Sbjct: 532 FVYDSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARENAPFSGGSTPLGDLR 587

Query: 418 NHIAQ---ELGIIN-CNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMP-QGG 465
             I +   E  +      F F W+ +FP +    + +        I   H+PFT P +  
Sbjct: 588 REIHKAAVEADLTPAPTGFHFLWVQEFPLFSPITDSEPGQGGAAGIASTHHPFTAPLRES 647

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
             SL   D   + A  YDLV NG E+  G  R H + V      ++          F  L
Sbjct: 648 DISLLLTDPTKVIADHYDLVLNGVELGGGSRRIHSAAVQEFILRDILKMPAERLADFAHL 707

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             A + G PPH GIA G DR+V ++LG ++VR+V  FP S    DLL+  PS ++ E LR
Sbjct: 708 LEALRAGCPPHAGIALGFDRLVAVMLGKESVRDVIAFPKSGKGEDLLIKCPSEMTEESLR 767

Query: 586 ELGLRIVEN 594
              LR+ + 
Sbjct: 768 TYHLRLQDE 776


>gi|258578065|ref|XP_002543214.1| hypothetical protein UREG_02730 [Uncinocarpus reesii 1704]
 gi|237903480|gb|EEP77881.1| hypothetical protein UREG_02730 [Uncinocarpus reesii 1704]
          Length = 690

 Score =  363 bits (931), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 168/616 (27%), Positives = 279/616 (45%), Gaps = 46/616 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDH--YGITQVVANPDSACFEIAKSVRSE 68
           L   + G  V L G++ +    G  + F+ + D       Q ++   +  F+  KS+   
Sbjct: 87  LEAQESGKHVTLYGYLGKRTDIGKKMSFVRLADPRLSQTVQAISFSKTDAFDKLKSIEPH 146

Query: 69  WVLCIDGLVMSRSAETINANIIT--------GQIELSAQKIEILSVAEELPLPVFGEREY 120
             + + G++ ++      +              +E++ + I++L+       P     + 
Sbjct: 147 SPVVLRGILQTKVTSAKESKQAPAVDKEGNINSLEIALEDIQLLN-----DFPNDIIMKP 201

Query: 121 PESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMI--AENFIECSTPILTASSPEGA 177
                   RFL +R D   ++ +  R R    +R  +      F+E  TP+L  S+PEGA
Sbjct: 202 ETVFPAGKRFLQIRNDREIRHALAFRARAGKVLREALEQCEPPFMEVETPLLFKSTPEGA 261

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R+FLVP+R   G  YALPQ+PQQYKQ+LM+ G  RY+Q A CFRDED R+DR P EF QL
Sbjct: 262 REFLVPTR-RPGFAYALPQSPQQYKQILMSGGIPRYYQFAHCFRDEDLRADRQP-EFTQL 319

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           D+EMSF   +D++N +E ++R ++            F R+ Y +A+ +YG+DKPD R  +
Sbjct: 320 DLEMSFASGEDVMNVIERIVRQLWSALMPEPLNDAPFPRMTYYEAMSKYGSDKPDPRIGM 379

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-GGNRAF-CDRMNEWARSQ--GQ 353
            ++ V ++ +  +  V       +P  EV  +   G     +AF    ++ +  S+    
Sbjct: 380 EIYRV-DYMIPVD-LVRRITNLSDPIVEVIKLKGNGDPAKTKAFTSSILDAFVPSELINN 437

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC--- 410
           P      + +D +  + G+            + +   L + +GD     A          
Sbjct: 438 PEGRPETFVIDSAQPLFGLQ----DFGFEAVDRLESELGLDNGDLLVVQARRKAPLSGGS 493

Query: 411 SFAADAR---NHIAQELGIIN-CNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPF 459
           +   D R   +  A E G       F F W+  FP +  + + +        I   H+PF
Sbjct: 494 TPLGDLRRVLHKAATETGFKRAPTGFNFLWVTHFPLFSPSSDTEPGQGGTAGIASTHHPF 553

Query: 460 TMPQ-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           T P       L   D   + A  YDLV NG E+  G  R H +EV      ++    E  
Sbjct: 554 TAPLGPEDVDLLLTDPTKVVADHYDLVVNGVELGGGSRRIHSAEVQKFILRDILKVPENR 613

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
              F  L  A + G PPH GIA G DR++ ++LG ++VR+V  FP S    D+++ +PS 
Sbjct: 614 LGDFSHLLEALRAGCPPHAGIALGFDRLIAIMLGKESVRDVIAFPKSGKGEDVMVKTPSK 673

Query: 579 VSVEQLRELGLRIVEN 594
           ++ + L    L++ + 
Sbjct: 674 MTEKALETYHLQLRQE 689


>gi|134058591|emb|CAK44627.1| unnamed protein product [Aspergillus niger]
          Length = 690

 Score =  363 bits (931), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 180/592 (30%), Positives = 272/592 (45%), Gaps = 50/592 (8%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYG--ITQVVANPDSACFEIAKSVRSEWVLCID 74
           G  V L G++ +    G  + F  + DH      Q+++N  S      K +     + + 
Sbjct: 88  GQSVLLHGYLDKRDDMGKELSFARLYDHTMGRTIQLLSNSQSNTLPQLKKISRGSPVVVQ 147

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V  R  +T         +E++ + I+ L+      +       +P     K+R L LR
Sbjct: 148 GTVKRRVTKTAEEE-RNDYLEIALESIQPLNEFPREIVLFGKNIVHP----PKHRHLQLR 202

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            D   ++ ++ R +  N  R  +      F+E  TP+L  S+PEGAR+F+VP+R  +G  
Sbjct: 203 SDKELRDALRFRAQARNVCRETLEQLKPAFVEIETPLLFKSTPEGAREFIVPTR-KRGKA 261

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           YALPQ+PQQYKQ+LMASG  RYFQ A CFRDED R+DR P EF QLD+EM+F    D++ 
Sbjct: 262 YALPQSPQQYKQILMASGIPRYFQFARCFRDEDLRADRQP-EFTQLDLEMAFAAGQDVMA 320

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +E ++RG++         S  F R+ Y +A+ RYG+DKPD R+ + +H V EH + ++ 
Sbjct: 321 VVEEIIRGLWGNMMREPVPSGPFRRMTYQEAMTRYGSDKPDTRHGMEIHRV-EHLLPAD- 378

Query: 312 RVFSKILSVNPGYEVWAI--PAKGGGGNRAFCDRMNEW-------ARSQGQPGLAYIFWR 362
            V       +P  E + +    +     R F  R  +            G PG+    + 
Sbjct: 379 LVSKITPLTDPIVEAFKMDTVEQLPSATREFVSRFFDSTEGVPFNKNPDGAPGI----FI 434

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC---SFAADARNH 419
            DE   + G+GP    L     E I+  LD+  GD     A     F    +     R  
Sbjct: 435 YDEGQPLKGLGP----LGFEAAEKIQEMLDLSHGDLLILQARPQGPFAGGATQLGSIRRA 490

Query: 420 IA-----QELGIINCNCFEFCWIMDFPFYEWNEE-------EKKIDFAHNPFTMPQGG-M 466
           +A     +EL       FEF WI+DFP +   +           +   H+PFT P+    
Sbjct: 491 MAAASISEELREAPPG-FEFLWIVDFPLFSPADASEPGQGGTAGLSATHHPFTAPKTSSD 549

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
             L   D     A  YDLV NG E+  G  R H +      F  +    +   + F  L 
Sbjct: 550 VDLLSKDPTKALADHYDLVVNGVELGGGSRRIHCALTQNYIFKEILKMPKERIDEFQHLL 609

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM-SQNFCDLLMGSPS 577
            A   G PPH G A G DR++ ++LG ++VR+V  FP   +   D ++ +P 
Sbjct: 610 NALWAGCPPHAGFALGFDRLITVMLGKESVRDVIAFPKIGKKGEDAMVKAPG 661


>gi|149244654|ref|XP_001526870.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146449264|gb|EDK43520.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 697

 Score =  362 bits (930), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 177/678 (26%), Positives = 291/678 (42%), Gaps = 94/678 (13%)

Query: 3   RYRTHSCGDLGVSDV------GSFVRLSGWVHRV-RPHGGIIFLDIRDHYGITQVVA--- 52
            Y T + G +            + + L G + R  R    + F  +RD  G         
Sbjct: 30  PYSTGTIGSITTQLDKYLNRKDTLITLHGHIDRKSRIRPTVGFGFLRDQEGDVIQFIADA 89

Query: 53  --NPDSACFEIAKSVRSEWVLCIDG----LVMSRSAETINANIIT-----------GQIE 95
             N      E  K +  E  + I G     V           + T              E
Sbjct: 90  DNNEHQLVLEKMKKLTVEDSISITGYAKPKVGKEQGRQEETAMATRSRTEDASKKPKAWE 149

Query: 96  LSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRC 154
           L  + ++IL+ +  +       ++  PE I  ++R+L LR       +  R++I   +R 
Sbjct: 150 LVVKDLQILNSSNLDASRLEKLKQTDPEDIPPQFRYLQLRTKFFQSALRTRSKIAQLVRN 209

Query: 155 RM-IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
            +    +F+E  TP+L  S+PEGAR+FLVP+R     FYALPQ+PQQYKQ+LMASGF RY
Sbjct: 210 TLVNNHDFVEIETPLLFKSTPEGAREFLVPTRTYD-QFYALPQSPQQYKQILMASGFTRY 268

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVF----------- 261
           FQ+A CFRDED R+DR P EF Q+D+EMS++   + I+  +E+V+  ++           
Sbjct: 269 FQLAKCFRDEDLRADRQP-EFTQVDLEMSYINSAEQIMKVVEDVVMNIWLKICNRPTYTL 327

Query: 262 ------EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
                 ++ ++ +     F ++ Y +A+ +YG DKPDLR+ I    + E F+  E   FS
Sbjct: 328 NEKGFLQKLTDIDNNKVQFSKLAYPEALLKYGIDKPDLRSDITFITLDEFFIGEENSEFS 387

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFCDRM-NEWARSQGQPGLAYIFWRLDESGNVAGMGP 374
                    E   +       N++  +++  E   +          W +    ++     
Sbjct: 388 -------VVEACVLRNALDNENKSSKNKLPKELTSTHNYSRRRPYVWAIRNDKDLLWYEK 440

Query: 375 VA-----KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF--AADARNHIAQEL--- 424
           +      K  N  + + ++  L+++ GD           + +       R    +E    
Sbjct: 441 LVEKKFMKKTNHFDEKKLKTILNLKPGDILAISTRSKFPYENPTPLGKFRQLAIKEFPGK 500

Query: 425 ----------GIINCNCFEFC----WIMDFPFYEWNE------------EEKKIDFAHNP 458
                      ++N   FE      W++DFP +   E               K +  H+P
Sbjct: 501 WQRPIEKESGELVNDYKFEDMVVGSWVVDFPLFNPVEISSSTEDPYPEYSMNKYESTHHP 560

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           FTM +     L G++ L ++   YDLV NG E+  G  R H   +    F  +   K   
Sbjct: 561 FTMCKSEDYELMGSNPLQVRGEHYDLVINGVEVGGGSRRIHDPALQKYVFEEILQIKH-Y 619

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
           +  FG L +A   G PPH G+A G DR+  +++G+ ++R+V  FP +Q+  DL++ SP+ 
Sbjct: 620 DQLFGHLLKALSMGCPPHAGLALGFDRLCAMVVGSSSIRDVIAFPKNQSGKDLVVESPTE 679

Query: 579 VSVEQLRELGLRIVENPK 596
           V  + L E  +    N K
Sbjct: 680 VLEKALNEYFITKKNNNK 697


>gi|239611007|gb|EEQ87994.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 643

 Score =  362 bits (929), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 183/610 (30%), Positives = 278/610 (45%), Gaps = 45/610 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGG-IIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +G  V L G++ +    G  + F+ + D       Q++A      F   KS+ +   + +
Sbjct: 20  LGQKVVLHGYLGKRVDMGKRMAFVRLTDPILSQNVQIIAFAKDKSFAKLKSIEANSPVVV 79

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY----PESIRFKYR 129
            G+V  +              E  A  IEI    E++       ++           + R
Sbjct: 80  QGVVQQKQPSLKEKPDAREGQEAKADSIEI--ALEDIHCLNEFPKDIIMTPDTVFPPEKR 137

Query: 130 FLDLRRD-TLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRV 186
            L +R D  L   +  R R  N +R  +      FIE  TP+L  S+PEGAR+FLVP+R 
Sbjct: 138 HLQIRADSKLRDALRFRARARNVLREALEECQLPFIEIETPLLFKSTPEGAREFLVPTR- 196

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMSF   
Sbjct: 197 RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMSFATG 255

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           +D++  +E  ++ ++      +  S +F R  Y+DA+ ++G+DKPD+R  + +  + EH 
Sbjct: 256 EDVITVIEAAVKKLWSSLMTHSLPSESFQRTTYEDAMAKFGSDKPDVRIGMEIKRI-EHM 314

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE-------WARSQGQPGLAYI 359
           V  +       L       +     +     R F +   +            G PG A++
Sbjct: 315 VPVDLVSKISPLHNPIVEAMKLEGNENPEDMRNFLNSFMDSPEASIFHKNPAGGPG-AFV 373

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC---SFAADA 416
           +   D    ++G+ P         T  +   LD++DGD     A +   F    +   D 
Sbjct: 374 Y---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARENAPFSGGSTPLGDL 426

Query: 417 RNHIAQ---ELGIIN-CNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMP-QG 464
           R  I +   E  +      F F W+ +FP +    + +        I   H+PFT P + 
Sbjct: 427 RREIHKAAVEADLTPAPTGFHFLWVQEFPLFSPITDSEPGQGGAAGIASTHHPFTAPLRE 486

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
              SL   D   + A  YDLV NG E+  G  R H + V      ++          F  
Sbjct: 487 SDISLLLTDPTKVIADHYDLVLNGVELGGGSRRIHSAAVQEFILRDILKMPAERLADFAH 546

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
           L  A + G PPH GIA G DR+V ++LG ++VR+V  FP S    DLL+  PS ++ E L
Sbjct: 547 LLEALRAGCPPHAGIALGFDRLVAVMLGKESVRDVIAFPKSGKGEDLLIKCPSEMTEESL 606

Query: 585 RELGLRIVEN 594
           R   LR+ + 
Sbjct: 607 RTYHLRLRDE 616


>gi|255715569|ref|XP_002554066.1| KLTH0E13530p [Lachancea thermotolerans]
 gi|238935448|emb|CAR23629.1| KLTH0E13530p [Lachancea thermotolerans]
          Length = 673

 Score =  362 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 179/603 (29%), Positives = 276/603 (45%), Gaps = 61/603 (10%)

Query: 21  VRLSGWVHRV-RPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V ++GW+ +  R  G  +IF  +RD  G    + +  S    + KS   E V+ ++G + 
Sbjct: 85  VVINGWIDKKPRSVGKGLIFSTLRDTEGDLIQLVDHKS----LLKSASVEDVVQVEGHLA 140

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
            + +     +    Q EL    I  L+ + + P  + G +   ES   ++R+L LR    
Sbjct: 141 LKESRG---DSDPAQYELRVLNINTLNKSSKKPSQLLGFK-IQESYPPEFRYLQLRLPKY 196

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG---SFYALP 195
              + KR +I  ++R  +  + F+E  TP+L  S+PEGAR+FLVP+R  Q    +FYALP
Sbjct: 197 QNFLQKRHQIAQNIRELLNLQGFLEVETPVLFKSTPEGAREFLVPARNKQDGKPTFYALP 256

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQQYKQLLMASG  +Y+Q A CFRDED RSDR P EF Q+D+EM+F   D I++ +E+
Sbjct: 257 QSPQQYKQLLMASGIQKYYQFARCFRDEDLRSDRQP-EFTQVDLEMAFASGDKIMHVVED 315

Query: 256 VLRGVFEEFSNGNTVSNNFL--------------RICYDDAIRRYGTDKPDLRN-PIIMH 300
            +   + +FS+   +                   R+ Y  A+  YG DKPDLR   + + 
Sbjct: 316 TMVSTWNKFSSSEALQTVDKNGLLVAVTGSQPVSRMSYKTAMTHYGIDKPDLRFRDLKIV 375

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +++E     +  +   +  V           +    N AF    NE       P +  + 
Sbjct: 376 DMSEFKARGKENILFPVFEV-LILRNAFSTVEEYHKNWAFLS--NEHNYRYRTPIVVPVE 432

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC----SFAADA 416
               E        P+A      N   +   L+++ GD        P        +     
Sbjct: 433 TEELERSWFEKFLPIADF---ENPTLMARFLNLKKGDIVCGSTRQPTSAIFENPTPLGRL 489

Query: 417 RNHI-----AQELGIINCNCFEFCWIMDFPFYEWNE---------------EEKKIDFAH 456
           R         ++L   +       W++DFP +   E               E  K+   H
Sbjct: 490 RQLAIQSPYGKKLYQKSEGAVA-TWVVDFPLFSPVEREVVGKETKQLYPVYESDKVTSTH 548

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +PFTM Q    +      LS     YD V NG E+  G  R H  E+    F ++   K 
Sbjct: 549 HPFTMVQLDDLAKLSKAPLSCAGQHYDFVLNGVELGGGSTRIHDPELQKYVFKDILKIK- 607

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
             E  FG L  AF+ G PPH G+A G DR+V ++ G++N+R+V  FP S +  DL++GSP
Sbjct: 608 EPEKLFGHLLTAFENGTPPHAGLAIGFDRMVAMICGSENIRDVIAFPKSVSGADLVVGSP 667

Query: 577 STV 579
           S++
Sbjct: 668 SSI 670


>gi|325087845|gb|EGC41155.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 637

 Score =  362 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 182/611 (29%), Positives = 285/611 (46%), Gaps = 50/611 (8%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCID 74
           G  V L G++ +    G  + F+ + D       Q++A   +  FE  KS+ +   + + 
Sbjct: 41  GKQVVLHGYLGKRVDMGKRMAFVRLTDPTLSQNVQIIAFAKNDSFEKLKSIEANSPVVVQ 100

Query: 75  GLVMSRSAETINA------NIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
           G+V  + A +            T  +E+S + I  L+       P             + 
Sbjct: 101 GVVQQKQASSKEKTAAEQDEAKTDCVEISLEDIHPLNE-----FPKDIIMTSDTVFPAEK 155

Query: 129 RFLDLRRD-TLHKNIVKRTRIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSR 185
           R L +R D  L   ++ R R  N +R  +      F+E  TP+L  S+ EGAR+FLVP+R
Sbjct: 156 RHLQIRTDSKLRDALLFRARARNILREALEECQLPFVEIETPLLFKSTLEGAREFLVPTR 215

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMSF  
Sbjct: 216 -RRGMAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMSFAT 273

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            +D++  +E  ++ ++    +    S +F R+ Y DA+ +YG+DKPD+R  + +  + E+
Sbjct: 274 GEDVMAIIEAAVKRLWSSLMSEPLPSGSFPRLSYGDAMAKYGSDKPDVRIGMEIKRI-EN 332

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE-------WARSQGQPGLAY 358
            +  +       L       +     +     R F +   +           +G PG A+
Sbjct: 333 MIPVDLVSKISPLHNPIVEAIKLEGNENPEEMRKFLNSFMDSPEASSFHKNPEGGPG-AF 391

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC---SFAAD 415
           ++   D    ++G+ P         T  +   LD++DGD     A     F    +   D
Sbjct: 392 VY---DSRKPLSGLQP----FGFEATWVLEQELDLKDGDLLIIQARKNAPFSGGSTPLGD 444

Query: 416 ARNHIAQE-LG---IINCNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMP-Q 463
            R  I +  +G   I +   F F W+ DFP +    + +        I   H+PFT P +
Sbjct: 445 LRREIHKAAVGATLISSPTGFHFLWVRDFPLFSPITDSEPGQGGAAGIASTHHPFTAPLR 504

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
               SL   D   + A  YDLV NG E+  G  R H + V      ++          F 
Sbjct: 505 KSDVSLLLTDPTKVIADHYDLVVNGVELGGGSRRIHSAAVQEFILRDILKMPADRLADFS 564

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            L  A + G PPH GIA G DR+V ++LG +++R+V  FP S    DLL+  PS ++ E 
Sbjct: 565 HLLEALRAGCPPHAGIALGFDRLVAVMLGKESLRDVIAFPKSGKGEDLLVKCPSEMTEES 624

Query: 584 LRELGLRIVEN 594
           LR   L+++++
Sbjct: 625 LRTYHLQLMDD 635


>gi|294656878|ref|XP_459196.2| DEHA2D16346p [Debaryomyces hansenii CBS767]
 gi|199431809|emb|CAG87367.2| DEHA2D16346p [Debaryomyces hansenii]
          Length = 704

 Score =  361 bits (927), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 176/638 (27%), Positives = 287/638 (44%), Gaps = 78/638 (12%)

Query: 21  VRLSGWVHRV-RPHGGIIFLDIRDHYG-ITQVVANPDSAC---FEIAKSVRSEWVLCIDG 75
           V L+G +H+  R      F ++RD  G ITQ++ +P+      F + K   +E  + + G
Sbjct: 74  VTLNGHIHKKPRIMATRSFAELRDSNGDITQILMSPEHTPTKLFNLLKETTTEDSVSVSG 133

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY-PESIRFKYRFLDLR 134
            V  + A+    N      EL  Q  +IL+ +      +   +   P+ +  ++R+L LR
Sbjct: 134 AVQLKQAKAGEENKK---WELVVQNYQILNHSNLDAARLDKLKHSSPKDLPPQFRYLQLR 190

Query: 135 RDTLHKNIVKRTRIINSMRC-RMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
                  +  R+++ N +R   +   +F+E  TP+L  S+PEGAR+FLVP+R +   FYA
Sbjct: 191 TPFYQNALRTRSKVANLIRNIFVEKHDFVEIETPLLFKSTPEGAREFLVPTRSHD-RFYA 249

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD----- 248
           LPQ+PQQYKQ+LM+SGF RYFQIA CFRDED R+DR P EF Q+D+EMS++   D     
Sbjct: 250 LPQSPQQYKQILMSSGFTRYFQIAKCFRDEDLRADRQP-EFTQIDLEMSYINNSDQVGLV 308

Query: 249 ILNTMENVLR-------------GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           + + + N+                V E+    +  +  F ++ Y +A+  YG DKPDLR+
Sbjct: 309 VEDLIHNIWNKIAMLPTYKVNSDDVLEKIDFEDRNTLAFSKLNYIEALSNYGIDKPDLRS 368

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--DRMNEWARSQGQ 353
            +   N+T          FS I + +    +     +G   +        + + A +  +
Sbjct: 369 SLKFKNIT--------TFFSPIKNKDNFPVLEVCILRGALDSSKSKVPSVLTD-ANNYSK 419

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE----AIRVRLDMQDGDSCFFIAGDPLKF 409
                   + +E         V K++           +   L ++ GD         L +
Sbjct: 420 RKPIIFGIKSEEDAQKWYQKFVDKNVIQKTAAFDETELHKYLGLKAGDILAISTRSELPY 479

Query: 410 CSF--AADAR-NHIAQELGIINCNCFE---------------FC--WIMDFPFYEWNE-- 447
            +       R   IA+         F+               F   W++DFP +   E  
Sbjct: 480 ENPTPLGKFRQLAIAEYPNKWKRKIFDRTTGDVFENYNTEEIFVGSWVVDFPLFNPVEIS 539

Query: 448 ----------EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
                     +  K +  H+PFTM +     L  +D L ++   YDLV NG E+  G  R
Sbjct: 540 ESNNAEFPEYDFTKFESTHHPFTMAKLEDYDLLASDPLKVRGEHYDLVINGVEVGGGSRR 599

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            H  ++    F  +   +      FG L  A   G PPH G+A G DR+  +L+G+ ++R
Sbjct: 600 IHDPQLQKYIFEKILKIRN-YHELFGHLLHALSMGCPPHAGLALGFDRLCTMLIGSTSIR 658

Query: 558 EVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           +V  FP +Q+  D ++ SPS V+ + L E  +  + N 
Sbjct: 659 DVIAFPKNQSGIDTVVDSPSHVNDKTLNEYHITTIVNE 696


>gi|119180393|ref|XP_001241672.1| hypothetical protein CIMG_08835 [Coccidioides immitis RS]
          Length = 684

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 183/623 (29%), Positives = 289/623 (46%), Gaps = 60/623 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDH--YGITQVVANPDSACFEIAKSVRSE 68
           L    +G  V L G++ R    G  + F+ + +       QV++   S  F+  +S+ + 
Sbjct: 81  LDTQGLGKRVTLHGYLGRRTDIGKKMSFVRLSNPPLTQTVQVISFSKSEAFDKLRSIEAN 140

Query: 69  WVLCIDGLVMSRSAETINANIITGQ-----------IELSAQKIEILSVAEELPLPVFGE 117
             + + G++ S   +  N+   T +           +E++ + ++ L+       P    
Sbjct: 141 SPVVVRGILQS---KIANSKGHTQEPTVDTEGNINSVEIALEDVQCLN-----DFPKDII 192

Query: 118 REYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMI--AENFIECSTPILTASSP 174
                    + R+L +R D  L + +  R R    +R  +      F+E  TP+L  S+P
Sbjct: 193 MTSETVFPAEKRYLQIRNDKDLRQALAFRARANKVLREVLEQCDPPFMEVETPLLFKSTP 252

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EGAR+FLVP+R   G  YALPQ+PQQYKQ+LM+SG  RY+Q A CFRDED R+DR P EF
Sbjct: 253 EGAREFLVPTR-RPGLAYALPQSPQQYKQILMSSGVPRYYQFAHCFRDEDLRADRQP-EF 310

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            QLDMEMSF   +D+++T+E V+R ++         ++ F R+ Y++A+ +YG+DKPDLR
Sbjct: 311 TQLDMEMSFARGEDVMSTIEQVIRKLWSTLMPEQLDASPFPRMTYNEAMSKYGSDKPDLR 370

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-----GGNRAFCDRMN--EW 347
             + +  V ++ +  +  V        P  E+  +   G          +F D     E+
Sbjct: 371 IGMEIRRV-DYMIPVD-LVNKITDLSAPIVEITKLKGNGDPIETRQFVTSFLDSPEASEF 428

Query: 348 AR-SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406
               +G PG+    +  D S  ++G+           T A+   LD+ DGD     A   
Sbjct: 429 INNPEGGPGV----FVFDSSKPLSGLQA----FGFEATWALENDLDLNDGDLLILQARQN 480

Query: 407 LKFC---SFAADARNHIAQ---ELGI-INCNCFEFCWIMDFPFYEWNEE-------EKKI 452
             F    +   D R  I +   E G       F F W+  FP +  + +          I
Sbjct: 481 APFSGGSTPLGDLRRAIHKAAVETGFKAAPTGFHFLWVTHFPLFSPSSDSEPGQGGTAGI 540

Query: 453 DFAHNPFTMP-QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
              H+PFT P      SL   D     A  YD+V NG E+  G  R H +EV      ++
Sbjct: 541 ASTHHPFTAPLTPEDVSLLLTDPTKATADHYDIVVNGVELGGGSRRIHSAEVQEFILRDI 600

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
               E     F  L  A + G PPH GIA G DR++ ++LG ++VR+V  FP S    D+
Sbjct: 601 LKMPESRLADFSHLLDALRAGCPPHAGIALGFDRLIAVMLGKESVRDVIAFPKSGKGEDV 660

Query: 572 LMGSPSTVSVEQLRELGLRIVEN 594
           ++ +PS ++ E L    L++   
Sbjct: 661 MVRTPSEMTEEALETYHLQLRRK 683


>gi|320035890|gb|EFW17830.1| aspartyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 688

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 180/620 (29%), Positives = 283/620 (45%), Gaps = 54/620 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGG---IIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           L    +G  V L G++ R    G     + L         QV++   S  F+  +S+ + 
Sbjct: 85  LDTQGLGKRVTLHGYLGRRTDIGKKMSFVRLSNPSLTQTVQVISFSKSEAFDKLRSIEAN 144

Query: 69  WVLCIDGLVM--------SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + + G++              T++       +E++ + ++ L+       P       
Sbjct: 145 SPVVVRGILRSKIASSKGHTQEPTVDTEGNINSVEIALEDVQCLN-----DFPKDIIMTS 199

Query: 121 PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGA 177
                 + R+L +R D  L + +  R R    +R  +      F+E  TP+L  S+PEGA
Sbjct: 200 ETVFPAEKRYLQIRNDKDLRQALAFRARANKVLREVLEECDPPFMEVETPLLFKSTPEGA 259

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R+FL+P+R   G  YALPQ+PQQYKQ+LM+SG  RY+Q A CFRDED R+DR P EF QL
Sbjct: 260 REFLIPTR-RPGLAYALPQSPQQYKQILMSSGVPRYYQFAHCFRDEDLRADRQP-EFTQL 317

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF   +D+++T+E V+R ++         ++ F R+ Y++A+ +YG+DKPDLR  +
Sbjct: 318 DMEMSFARGEDVMSTIEQVIRKLWSTLMPEQLDASPFPRMTYNEAMSKYGSDKPDLRIGM 377

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-----GGNRAFCDRMN--EWAR- 349
            +  V ++ +  +  V        P  E+  +   G          +F D     E+   
Sbjct: 378 EIRRV-DYMIPVD-LVNKITDLSAPIVEITKLKGNGDPIETRQFVTSFLDSPEASEFINN 435

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
            +G PG+    +  D S  ++G+           T A+   LD+ DGD     A     F
Sbjct: 436 PEGGPGV----FVFDSSKPLSGLQA----FGFEATWALENDLDLNDGDLLILQARQNAPF 487

Query: 410 C---SFAADARNHIAQ---ELGIIN-CNCFEFCWIMDFPFYEWNEE-------EKKIDFA 455
               +   D R  I +   E G       F F W+  FP +  + +          I   
Sbjct: 488 SGGSTPLGDLRRAIHKAAVETGFKPAPTGFHFLWVTHFPLFSPSSDSEPGQGGTAGIAST 547

Query: 456 HNPFTMP-QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
           H+PFT P      SL   D     A  YD+V NG E+  G  R H +EV      ++   
Sbjct: 548 HHPFTAPLTPEDVSLLLTDPTKATADHYDIVVNGVELGGGSRRIHSAEVQEFILRDILKM 607

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
            E     F  L  A + G PPH GIA G DR++ ++LG ++VR+V  FP S    D+++ 
Sbjct: 608 PESRLADFSHLLDALRAGCPPHSGIALGFDRLIAVMLGKESVRDVIAFPKSGKGEDVMVR 667

Query: 575 SPSTVSVEQLRELGLRIVEN 594
           +PS ++ E L    L++   
Sbjct: 668 TPSEMTEEALETYHLQLRRK 687


>gi|256274257|gb|EEU09165.1| Msd1p [Saccharomyces cerevisiae JAY291]
          Length = 658

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 173/648 (26%), Positives = 269/648 (41%), Gaps = 71/648 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRV--RPHGGIIFLDIRDHYGITQVVANPDSAC 58
           + R  T +   L     G  + L+GW+ +   R    +IF  +RD  G    + +  S  
Sbjct: 30  LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKS-- 87

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
             + K    E V+   G++   S +   +N    + E+  + I +L+ + + P  +   +
Sbjct: 88  --LLKGFTLEDVVQTVGIL---SLKRKLSNEDADEYEVQLEDITVLNASNKKPAQMQDFK 142

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                   ++R+L LR       + KR+ I   +R      +F E  TP+L  ++PEGAR
Sbjct: 143 LS-AIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATPEGAR 201

Query: 179 DFLVPSRVNQGS----FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           +FLVP+R  +      FYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR P EF
Sbjct: 202 EFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQP-EF 260

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG-----------------NTVSNNFLRI 277
            Q+DMEM+F   +D++  +E  + GV+ +FS                      + +  R+
Sbjct: 261 TQVDMEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLDSKGTLVPAKKENGTVSIFRM 320

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y+ A+  YG DKPDLR P +     +     EF  FS  L+         I        
Sbjct: 321 TYEQAMTSYGIDKPDLRAPDL-----KIINLGEFNAFS-HLNKKFPVFEVIILRNAFSNM 374

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRL--DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             + +R +    +        I   +  DE  N              N   I   L ++ 
Sbjct: 375 EEYKERWSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPHLITKFLKLKK 434

Query: 396 GDSCFFIAGDPLKFC----SFAADAR-NHIAQELGIINCNCFEFC------WIMDFPFYE 444
           GD       +P        +     R   +  E G    N +         WI+DFP + 
Sbjct: 435 GDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHG---KNIYHAVNKDVASWIVDFPLFS 491

Query: 445 W----------------NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
                              E+ ++   H+PFTM +                  YDLV NG
Sbjct: 492 PVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCLGQHYDLVVNG 551

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
            E+  G  R H   +    F ++       E  FG L  AF  G PPH G A G DR+  
Sbjct: 552 VELGGGSTRIHDPRLQDYIFEDILKIDNAYE-LFGHLLNAFDMGTPPHAGFAIGFDRMCA 610

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           ++   +++R+V  FP S    DL++ SPS +    L    ++   + K
Sbjct: 611 MICETESIRDVIAFPKSITGADLVVKSPSVIPESILEPYNIKYSNSKK 658


>gi|148707382|gb|EDL39329.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_a [Mus
           musculus]
          Length = 526

 Score =  360 bits (925), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 153/487 (31%), Positives = 242/487 (49%), Gaps = 41/487 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---I 61
           RT++CG+L  S +G  V L GW+   R +    FL +RD +G+ Q++   D +      I
Sbjct: 69  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDCHGLVQILIPQDESAASVRRI 125

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 126 LCEAPVESVVRVSGTVISRPPGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 185

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 186 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 245

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 246 LVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 303

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFVEQ  I   +E +L+  +    + + +   F  + + +A+  YGTDKPD R  + + 
Sbjct: 304 MSFVEQTGIQRLVEGLLQYSW--PGDKDPLVTPFPSMTFAEALATYGTDKPDTRFGMKIV 361

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +V++ F ++E R     L+  P   V AI    G                     +  IF
Sbjct: 362 DVSDVFRNTELRFLQDALA-KPQGTVKAICVHDGAE-------------------VLPIF 401

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               ++       P AK +       +   +++Q+ D     AG+  K CS     R   
Sbjct: 402 LNAKKN----WSSPFAKFIMEEERLELARSMEIQEEDIVLLTAGEHEKACSLLGKLRLEC 457

Query: 421 AQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGNDL 474
           A  L      + +   F F W++DFP +   EE   +++ AH+PFT P      L   + 
Sbjct: 458 ADLLEMRGAVLRDPAVFSFLWVVDFPLFLAKEESPTELESAHHPFTAPNSSDIHLLYTEP 517

Query: 475 LSIKAFQ 481
             +  + 
Sbjct: 518 EKVLTYS 524


>gi|150866285|ref|XP_001385831.2| aspartyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149387541|gb|ABN67802.2| aspartyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 668

 Score =  360 bits (923), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 175/640 (27%), Positives = 285/640 (44%), Gaps = 76/640 (11%)

Query: 20  FVRLSGWVHRV-RPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLCID 74
            V ++G ++R  R    + F +IRD  G    +        S  F++ K+   E  + + 
Sbjct: 39  KVTINGHINRKPRIRPELSFAEIRDSNGDCTQILLTPQTTSSKLFDLLKTTTVEDAVSVT 98

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY-PESIRFKYRFLDL 133
           G V  +  +  +    T + EL    ++IL+ +      +   +   PE +  ++R+L L
Sbjct: 99  GHVQLKKMKPGD---ATREWELVVDNLQILNSSNLDAARLDKLKHSNPEQLPPQFRYLQL 155

Query: 134 RRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           R       +  R+++   +R        F E  TP+L  S+PEGAR+FLVP+R +   FY
Sbjct: 156 RTKFYQNALKTRSKVAMLIRNIFTENHEFTEIETPLLFKSTPEGAREFLVPTR-SPDKFY 214

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILN 251
           ALPQ+PQQYKQ+LM+SGF RYFQIA CFRDED R+DR P EF Q+D+EM++V   D +  
Sbjct: 215 ALPQSPQQYKQILMSSGFTRYFQIAKCFRDEDLRADRQP-EFTQVDLEMAYVNNCDQVGV 273

Query: 252 TMENVLRGVFEEFSNG--------------------NTVSNNFLRICYDDAIRRYGTDKP 291
            +E+++  V+    N                        S +F ++ Y DA+ +YG DKP
Sbjct: 274 VVEDLIHNVWNRIRNISTYRVNEQGYLEAIDFDSTKPNSSLHFGKLKYIDALCKYGIDKP 333

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-GGNRAFCDRMNEWARS 350
           DLR+ +   N++E F+ S        +      +    P+KG     R+  D ++   R 
Sbjct: 334 DLRSKLEFVNLSELFIPSSTNNGQFPVLEACILKKAFEPSKGKYKLPRSLIDPLSYTRRK 393

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT----EAIRVRLDMQDGDSCFFIAGDP 406
                   I  + +          + K +           ++  LD++ GD   F     
Sbjct: 394 P-----IVIPIQDENDATNWYKKFIEKKVFSEAATFSEHKLQASLDLEAGDILAFSTRAE 448

Query: 407 LKFCSF--AADARNHIAQEL------GIINCNC------------FEFCWIMDFPFYEWN 446
           L + +       R     E        I + +             F   W+++FP +   
Sbjct: 449 LPYENPTPLGKFRQLAINEFPEKWNREIYDKSSGTISEVKDTSAIFVGSWVVEFPLFSPV 508

Query: 447 E------------EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
           E            +    +  H+PFTM +     L     L ++   YDLV NG E+  G
Sbjct: 509 EISSSSNNDFPEYDFTSFESTHHPFTMAKHEDYDLLETAPLKVRGEHYDLVINGVEVGGG 568

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
             R H +E+    F N+ ++     + FG L  A   G PPH G+A G DR+  +LLG+ 
Sbjct: 569 SRRIHDAELQKFVFKNI-LNITNYNDLFGHLLHALSMGCPPHAGLALGFDRLCAMLLGSA 627

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           ++R+V  FP +Q+  D ++ SP++VS   L +  +    N
Sbjct: 628 SIRDVIAFPKNQSGFDPVVESPTSVSESTLNQYYITTKLN 667


>gi|225679790|gb|EEH18074.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 578

 Score =  360 bits (923), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 177/593 (29%), Positives = 272/593 (45%), Gaps = 51/593 (8%)

Query: 36  IIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM--------SRSAETI 85
           + F+ + D       QV+A   +  FE  KS+ +   + + G+V           + E  
Sbjct: 1   MAFVRLTDPTLSQNVQVIAFAKNKSFEKLKSIEANSPVVVQGIVQQKQANSKEKAAGERD 60

Query: 86  NANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV-K 144
           N+N+ +  IE++ + I  L+       P             + R L +R D+  +  +  
Sbjct: 61  NSNVDS--IEIALEDIYCLNE-----FPKDIIMTSETIFPAEKRHLQIRADSNLRGALQF 113

Query: 145 RTRIINSMRCRM--IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202
           R R  N +R  +      F+E  TP+L  S+PEGAR+FLVP+R  +G  YALPQ+PQQYK
Sbjct: 114 RARARNVLRETLEDFQPPFLEIETPLLFKSTPEGAREFLVPTR-RRGLAYALPQSPQQYK 172

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           Q+LMASG  RY+Q A CFRDED R+DR P EF QLD+EMSF   +D++  +E  ++ ++ 
Sbjct: 173 QILMASGIHRYYQFARCFRDEDLRADRQP-EFTQLDLEMSFATGEDVMKIIEAAMKRLWT 231

Query: 263 EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNP 322
                     +F R  Y++A+ +YG+DKPD+R  + +  + EH +  +  + SKI  +N 
Sbjct: 232 TLMRAPLTPESFPRTTYENAMAKYGSDKPDVRIGMEIKRI-EHMIPVD--LVSKISPLNN 288

Query: 323 GYEVWAIPAKGGGGNRAFCDRMNEWARS------QGQPGLAYIFWRLDESGNVAGMGPVA 376
                A+  +G G +      +  +  S         P      +  D    ++G+ P  
Sbjct: 289 PIVE-AMKLEGNGDSDEMRKFLTSFMDSPTSSWFHNNPEGGPGAFVYDSRKPLSGLQP-- 345

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF---AADARNHI---AQELGIIN-C 429
                  T  +   L+++DGD     A +   F        + R  I   A E       
Sbjct: 346 --FGFEATWVLEQELNLKDGDLLLIQARNNAPFSGSSTPLGNLRREIHRAAVEANFTPAP 403

Query: 430 NCFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQ 481
             F F W+  FP +    + +        I   H+PFT P      SL   D   + A  
Sbjct: 404 TGFHFLWVTGFPLFSPVSDSEPGQGGAAGITSTHHPFTAPLHESDISLLLTDPTKVVADH 463

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YDLV NG E+  G  R H + V      ++          F  L  A + G PPH GIA 
Sbjct: 464 YDLVLNGVELGGGSRRIHSAAVQDFILRDILKMPAERLADFAHLLEALRAGCPPHAGIAL 523

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           G DR+V ++LG ++VR+V  FP S    DLL+  PS ++ + LR   L +   
Sbjct: 524 GFDRLVAVMLGRESVRDVIAFPKSGKGEDLLVKCPSEMTEDSLRTYHLSLRGK 576


>gi|303321267|ref|XP_003070628.1| aspartyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240110324|gb|EER28483.1| aspartyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 688

 Score =  360 bits (923), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 180/620 (29%), Positives = 283/620 (45%), Gaps = 54/620 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGG---IIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           L    +G  V L G++ R    G     + L         QV++   S  F+  +S+ + 
Sbjct: 85  LDTQGLGKRVTLHGYLGRRTDIGKKMSFVRLSNPSLTQTVQVISFSKSEAFDKLRSIEAN 144

Query: 69  WVLCIDGLVM--------SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + + G++              T++       +E++ + ++ L+       P       
Sbjct: 145 SPVVVRGILRSKIASSKGHTQEPTVDTEGNINSVEIALEDVQCLN-----DFPKDIIMTS 199

Query: 121 PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAE--NFIECSTPILTASSPEGA 177
                 + R+L +R D  L + +  R R    +R  +      F+E  TP+L  S+PEGA
Sbjct: 200 ETVFPAEKRYLQIRNDKDLRQALAFRARANKVLREVLEECDPPFMEVETPLLFKSTPEGA 259

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R+FL+P+R   G  YALPQ+PQQYKQ+LM+SG  RY+Q A CFRDED R+DR P EF QL
Sbjct: 260 REFLIPTR-RPGLAYALPQSPQQYKQILMSSGVPRYYQFAHCFRDEDLRADRQP-EFTQL 317

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           DMEMSF   +D+++T+E V+R ++         ++ F R+ Y++A+ +YG+DKPDLR  +
Sbjct: 318 DMEMSFARGEDVMSTIEQVIRKLWSTLMPEQLDASPFPRMTYNEAMSKYGSDKPDLRIGM 377

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-----GGNRAFCDRMN--EWAR- 349
            +  V ++ +  +  V        P  E+  +   G          +F D     E+   
Sbjct: 378 EIRRV-DYMIPVD-LVNKITDLSAPIVEITKLKGNGDPIETRQFVTSFLDSPEASEFINN 435

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
            +G PG+    +  D S  ++G+           T A+   LD+ DGD     A     F
Sbjct: 436 PEGGPGV----FVFDSSKPLSGLQA----FGFEATWALENDLDLNDGDLLILQARQNAPF 487

Query: 410 C---SFAADARNHIAQ---ELGIIN-CNCFEFCWIMDFPFYEWNEE-------EKKIDFA 455
               +   D R  I +   E G       F F W+  FP +  + +          I   
Sbjct: 488 SGGSTPLGDLRRAIHKAAVETGFKPAPTGFHFLWVTHFPLFSASSDSEPGQGGTAGIAST 547

Query: 456 HNPFTMP-QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
           H+PFT P      SL   D     A  YD+V NG E+  G  R H +EV      ++   
Sbjct: 548 HHPFTAPLTPEDVSLLLTDPTKATADHYDIVVNGVELGGGSRRIHSAEVQEFILRDILKM 607

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
            E     F  L  A + G PPH GIA G DR++ ++LG ++VR+V  FP S    D+++ 
Sbjct: 608 PESRLADFSHLLDALRAGCPPHSGIALGFDRLIAVMLGKESVRDVIAFPKSGKGEDVMVR 667

Query: 575 SPSTVSVEQLRELGLRIVEN 594
           +PS ++ E L    L++   
Sbjct: 668 TPSEMTEEALETYHLQLRRK 687


>gi|190407852|gb|EDV11117.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
          Length = 658

 Score =  360 bits (923), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 174/648 (26%), Positives = 273/648 (42%), Gaps = 71/648 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRV--RPHGGIIFLDIRDHYGITQVVANPDSAC 58
           + R  T +   L     G  + L+GW+ +   R    +IF  +RD  G    + +  S  
Sbjct: 30  LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKS-- 87

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
             + K    E V+   G++   S +   +N    + E+  + I +L+ + + P  +   +
Sbjct: 88  --LLKGFTLEDVVQAVGIL---SLKRKLSNEDADEYEVQLEDITVLNASNKKPAQMQDFK 142

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                   ++R+L LR       + KR+ I   +R      +F E  TP+L  ++PEGAR
Sbjct: 143 LS-AIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATPEGAR 201

Query: 179 DFLVPSRVNQGS----FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           +FLVP+R  +      FYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR P EF
Sbjct: 202 EFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQP-EF 260

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG-----------------NTVSNNFLRI 277
            Q+DMEM+F   +D++  +E  + GV+ +FS                      + +  R+
Sbjct: 261 TQVDMEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLDSKGTLVPAKKENGTVSIFRM 320

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y+ A+  YG DKPDLR P +     +     EF  FS +    P +EV  + +      
Sbjct: 321 TYEQAMTSYGIDKPDLRAPDL-----KIINLGEFNAFSHLNKKFPVFEVIILRSAFSNM- 374

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRL--DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             + +R +    +        I   +  DE  N              N   I   L ++ 
Sbjct: 375 EEYKERWSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPHLITKFLKLKK 434

Query: 396 GDSCFFIAGDPLKFC----SFAADAR-NHIAQELGIINCNCFEFC------WIMDFPFYE 444
           GD       +P        +     R   +  E G    N +         WI+DFP + 
Sbjct: 435 GDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHG---KNIYHAVNKDVASWIVDFPLFS 491

Query: 445 W----------------NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
                              E+ ++   H+PFTM +                  YDLV NG
Sbjct: 492 PVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCLGRHYDLVVNG 551

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
            E+  G  R H   +    F ++       E  FG L  AF  G PPH G A G DR+  
Sbjct: 552 VELGGGSTRIHDPRLQDYIFEDILKIDNAYE-LFGHLLNAFDMGTPPHAGFAIGFDRMCA 610

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           ++   +++R+V  FP S    DL++ SPS +    L    ++   + K
Sbjct: 611 MICETESIRDVIAFPKSITGADLVVKSPSVIPESILEPYNIKYSNSKK 658


>gi|6325153|ref|NP_015221.1| Msd1p [Saccharomyces cerevisiae S288c]
 gi|135101|sp|P15179|SYDM_YEAST RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|172872|gb|AAA35137.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|173036|gb|AAA35173.1| mitochondrial aspartyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|1151223|gb|AAB68196.1| Msd1p: mitochondrial aspartyl-tRNA synthetase [Saccharomyces
           cerevisiae]
 gi|151942693|gb|EDN61039.1| mitochondrial aspartyl-tRNA synthetase [Saccharomyces cerevisiae
           YJM789]
 gi|285815437|tpg|DAA11329.1| TPA: Msd1p [Saccharomyces cerevisiae S288c]
          Length = 658

 Score =  359 bits (922), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 174/648 (26%), Positives = 273/648 (42%), Gaps = 71/648 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRV--RPHGGIIFLDIRDHYGITQVVANPDSAC 58
           + R  T +   L     G  + L+GW+ +   R    +IF  +RD  G    + +  S  
Sbjct: 30  LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKS-- 87

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
             + K    E V+   G++   S +   +N    + E+  + I +L+ + + P  +   +
Sbjct: 88  --LLKGFTLEDVVQAVGIL---SLKRKLSNEDADEYEVQLEDITVLNASNKKPAQMQDFK 142

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                   ++R+L LR       + KR+ I   +R      +F E  TP+L  ++PEGAR
Sbjct: 143 LS-AIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNFDFTEVETPMLFKATPEGAR 201

Query: 179 DFLVPSRVNQGS----FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           +FLVP+R  +      FYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR P EF
Sbjct: 202 EFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQP-EF 260

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG-----------------NTVSNNFLRI 277
            Q+DMEM+F   +D++  +E  + GV+ +FS                      + +  R+
Sbjct: 261 TQVDMEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLDSKGTLVPAKKENGTVSIFRM 320

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y+ A+  YG DKPDLR P +     +     EF  FS +    P +EV  + +      
Sbjct: 321 TYEQAMTSYGIDKPDLRAPDL-----KIINLGEFNAFSHLNKKFPVFEVIILRSAFSNM- 374

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRL--DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             + +R +    +        I   +  DE  N              N   I   L ++ 
Sbjct: 375 EEYKERWSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPHLITKFLKLKK 434

Query: 396 GDSCFFIAGDPLKFC----SFAADAR-NHIAQELGIINCNCFEFC------WIMDFPFYE 444
           GD       +P        +     R   +  E G    N +         WI+DFP + 
Sbjct: 435 GDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHG---KNIYHAVNKDVASWIVDFPLFS 491

Query: 445 W----------------NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
                              E+ ++   H+PFTM +                  YDLV NG
Sbjct: 492 PVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCLGRHYDLVVNG 551

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
            E+  G  R H   +    F ++       E  FG L  AF  G PPH G A G DR+  
Sbjct: 552 VELGGGSTRIHDPRLQDYIFEDILKIDNAYE-LFGHLLNAFDMGTPPHAGFAIGFDRMCA 610

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           ++   +++R+V  FP S    DL++ SPS +    L    ++   + K
Sbjct: 611 MICETESIRDVIAFPKSITGADLVVKSPSVIPESILEPYNIKYSNSKK 658


>gi|323331212|gb|EGA72630.1| Msd1p [Saccharomyces cerevisiae AWRI796]
          Length = 662

 Score =  359 bits (922), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 173/648 (26%), Positives = 269/648 (41%), Gaps = 71/648 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRV--RPHGGIIFLDIRDHYGITQVVANPDSAC 58
           + R  T +   L     G  + L+GW+ +   R    +IF  +RD  G    + +  S  
Sbjct: 30  LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKS-- 87

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
             + K    E V+   G++   S +   +N    + E+  + I +L+ + + P  +   +
Sbjct: 88  --LLKGFTLEDVVQAVGIL---SLKRKLSNEDADEYEVQLEDITVLNASNKKPAQMQDFK 142

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                   ++R+L LR       + KR+ I   +R      +F E  TP+L  ++PEGAR
Sbjct: 143 LS-AIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNFDFTEVETPMLFKATPEGAR 201

Query: 179 DFLVPSRVNQGS----FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           +FLVP+R  +      FYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR P EF
Sbjct: 202 EFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQP-EF 260

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG-----------------NTVSNNFLRI 277
            Q+DMEM+F   +D++  +E  + GV+ +FS                      + +  R+
Sbjct: 261 TQVDMEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLDSKGTLVPAKKENGTVSIFRM 320

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y+ A+  YG DKPDLR P +     +     EF  FS  L+         I        
Sbjct: 321 TYEQAMTSYGIDKPDLRAPDL-----KIINLGEFNAFS-HLNKKFPVFEVIILRNAFSNM 374

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRL--DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             + +R +    +        I   +  DE  N              N   I   L ++ 
Sbjct: 375 EEYKERWSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPHLITKFLKLKK 434

Query: 396 GDSCFFIAGDPLKFC----SFAADAR-NHIAQELGIINCNCFEFC------WIMDFPFYE 444
           GD       +P        +     R   +  E G    N +         WI+DFP + 
Sbjct: 435 GDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHG---KNIYHAVNKDVASWIVDFPLFS 491

Query: 445 W----------------NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
                              E+ ++   H+PFTM +                  YDLV NG
Sbjct: 492 PVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCLGRHYDLVVNG 551

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
            E+  G  R H   +    F ++       E  FG L  AF  G PPH G A G DR+  
Sbjct: 552 VELGGGSTRIHDPRLQDYIFEDILKIDNAYE-LFGHLLNAFDMGTPPHAGFAIGFDRMCA 610

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           ++   +++R+V  FP S    DL++ SPS +    L    ++   + K
Sbjct: 611 MICETESIRDVIAFPKSITGADLVVKSPSVIPESILEPYNIKYSNSKK 658


>gi|323302733|gb|EGA56539.1| Msd1p [Saccharomyces cerevisiae FostersB]
          Length = 658

 Score =  359 bits (921), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 173/648 (26%), Positives = 268/648 (41%), Gaps = 71/648 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRV--RPHGGIIFLDIRDHYGITQVVANPDSAC 58
           + R  T +   L     G  + L+GW+ +   R    +IF  +RD  G    + +  S  
Sbjct: 30  LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKS-- 87

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
             + K    E V+   G++   S +   +N    + EL  + I +L+ + + P  +   +
Sbjct: 88  --LLKGFTLEDVVQAVGIL---SLKRKLSNEDADEYELQLEDITVLNASNKKPAQMQDFK 142

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                   ++R+L LR       + KR+ I   +R      +F E  TP+L  ++PEGAR
Sbjct: 143 LS-AIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATPEGAR 201

Query: 179 DFLVPSRVNQGS----FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           +FLVP+R  +      FYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR P EF
Sbjct: 202 EFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQP-EF 260

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG-----------------NTVSNNFLRI 277
            Q+DMEM+F   +D++  +E  +  V+ +FS                      + +  R+
Sbjct: 261 TQVDMEMAFANSEDVMKIIEKTVSEVWSKFSKKRGLLTLDSKGTLVPAKKENGTVSIFRM 320

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y+ A+  YG DKPDLR P +     +     EF  FS  L+         I        
Sbjct: 321 TYEQAMTSYGIDKPDLRAPDL-----KIINLGEFNAFS-HLNKKFPVXEVIILRNAFSNM 374

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRL--DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             + +R +    +        I   +  DE  N              N   I   L ++ 
Sbjct: 375 EEYKERWSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPHLITKFLKLKK 434

Query: 396 GDSCFFIAGDPLKFC----SFAADAR-NHIAQELGIINCNCFEFC------WIMDFPFYE 444
           GD       +P        +     R   +  E G    N +         WI+DFP + 
Sbjct: 435 GDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHG---KNIYHAVNKDVASWIVDFPLFS 491

Query: 445 W----------------NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
                              E+ ++   H+PFTM +                  YDLV NG
Sbjct: 492 PVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCLGQHYDLVVNG 551

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
            E+  G  R H   +    F ++       E  FG L  AF  G PPH G A G DR+  
Sbjct: 552 VELGGGSTRIHDPRLQDYIFEDILKIDNAYE-LFGHLLNAFDMGTPPHAGFAIGFDRMCA 610

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           ++   +++R+V  FP S    DL++ SPS +    L    ++   + K
Sbjct: 611 MICETESIRDVIAFPKSITGADLVVKSPSVIPESILEPYNIKYSNSKK 658


>gi|238491530|ref|XP_002377002.1| aspartyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
 gi|220697415|gb|EED53756.1| aspartyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
          Length = 560

 Score =  358 bits (920), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 174/577 (30%), Positives = 264/577 (45%), Gaps = 45/577 (7%)

Query: 44  HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEI 103
            + I  V    +    E  K+VR+   + + G V ++ A+       T   E+    I  
Sbjct: 2   RHSIQLVSLAKNG-ALEKLKAVRANSPVAVRGKVKAKQAKGSEME-KTDPWEIQVDDIRT 59

Query: 104 LSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE--N 160
           L+       P     +       K RFL LR D  L   +  R ++ N  +  +      
Sbjct: 60  LN-----DFPSDIIMKSDTVFPPKQRFLQLRSDSELRDALRFRAQVHNVCKEELEQCRPP 114

Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
           F+E  TP+L  S+PEGAR+FLVP+R  +G  YALPQ+PQQYKQ+LMASG  RYFQ A CF
Sbjct: 115 FVEIETPLLFKSTPEGAREFLVPTR-KRGLAYALPQSPQQYKQILMASGIPRYFQFARCF 173

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
           RDED R+DR P EF QLDMEMSF   +D++ T+E ++R ++         S  F R+ Y 
Sbjct: 174 RDEDLRADRQP-EFTQLDMEMSFATGEDVMRTVEGIIRRLWSTLMKDPAPSGPFQRMSYQ 232

Query: 281 DAIRRYGTDKPDLRNPIIMHNVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGNR 338
           DA+ RYG+DKPD R  + +  + EH +  +   ++    L +   +++          + 
Sbjct: 233 DAMSRYGSDKPDTRFGMEISRI-EHLLPVDLVSKITPLTLPIVEVFKLENNENDPAAMSE 291

Query: 339 AFCDRMNEWA------RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
                ++  A        +G PG+    +  D    + G+ P          E +   L+
Sbjct: 292 FISQFLDSPAGVPFNNNPEGGPGI----FVYDAKKPLCGLQP----FGFEAAEYLEELLE 343

Query: 393 MQDGDSCFFIAGDPLKFCSFA---ADARNHI---AQELGIIN-CNCFEFCWIMDFPFYEW 445
           +  GD     A +   F   +    D R  +   A   G       F+F WI+DFP +  
Sbjct: 344 LDHGDLIVIQAREKAPFSGGSTPIGDLRRALHSAAVSSGFKPAPTGFDFRWIVDFPLFSP 403

Query: 446 NEEEK-------KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           + + +        I   H+PFT P+      L   D   + A  YDLV NG E+  G  R
Sbjct: 404 SSDSEPGQGGAAGISSTHHPFTAPKTAADVDLLLTDPTKVVADHYDLVVNGVELGGGSRR 463

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            H + V      ++          F  L  A + G PPH G+A G DR+V ++LG ++VR
Sbjct: 464 IHDATVQEFILRDILQMPAERLADFSHLLEALRAGCPPHAGLALGFDRLVAVMLGKESVR 523

Query: 558 EVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVE 593
           +V  FP       D ++ +PS ++ E L    L++ E
Sbjct: 524 DVIAFPKIGKVGEDPMVKAPSVMTEEALETYHLQLKE 560


>gi|259150054|emb|CAY86857.1| Msd1p [Saccharomyces cerevisiae EC1118]
          Length = 658

 Score =  358 bits (919), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 172/648 (26%), Positives = 268/648 (41%), Gaps = 71/648 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRV--RPHGGIIFLDIRDHYGITQVVANPDSAC 58
           + R  T +   L     G  + L+GW+ +   R    +IF  +RD  G    + +  S  
Sbjct: 30  LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKS-- 87

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
             + K    E V+   G++   S +   +N    + E+  + I +L+ + + P  +   +
Sbjct: 88  --LLKGFTLEDVVQAVGIL---SLKRKLSNEDADEYEVQLEDITVLNASNKKPAQMQDFK 142

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                   ++R+L LR       + KR+ I   +R      +F E  TP+L  ++PEGAR
Sbjct: 143 LS-AIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATPEGAR 201

Query: 179 DFLVPSRVNQGS----FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           +FLVP+R  +      FYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR P EF
Sbjct: 202 EFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQP-EF 260

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG-----------------NTVSNNFLRI 277
            Q+DMEM+F   +D++  +E  +  V+ +FS                      + +  R+
Sbjct: 261 TQVDMEMAFANSEDVMKIIEKTVSEVWSKFSKKRGLLTLDSKGTLVPAKKENGTVSIFRM 320

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y+ A+  YG DKPDLR P +     +     EF  FS  L+         I        
Sbjct: 321 TYEQAMTSYGIDKPDLRAPDL-----KIINLGEFNAFS-HLNKKFPVFEVIILRNAFSNM 374

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRL--DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             + +R +    +        I   +  DE  N              N   I   L ++ 
Sbjct: 375 EEYKERWSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPHLITKFLKLKK 434

Query: 396 GDSCFFIAGDPLKFC----SFAADAR-NHIAQELGIINCNCFEFC------WIMDFPFYE 444
           GD       +P        +     R   +  E G    N +         WI+DFP + 
Sbjct: 435 GDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHG---KNIYHAVNKDVASWIVDFPLFS 491

Query: 445 W----------------NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
                              E+ ++   H+PFTM +                  YDLV NG
Sbjct: 492 PVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCLGRHYDLVVNG 551

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
            E+  G  R H   +    F ++       E  FG L  AF  G PPH G A G DR+  
Sbjct: 552 VELGGGSTRIHDPRLQDYIFEDILKIDNAYE-LFGHLLNAFDMGTPPHAGFAIGFDRMCA 610

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           ++   +++R+V  FP S    DL++ SPS +    L    ++   + K
Sbjct: 611 MICETESIRDVIAFPKSITGADLVVKSPSVIPESILEPYNIKYSNSKK 658


>gi|317146025|ref|XP_001821239.2| aspartyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 588

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 174/575 (30%), Positives = 265/575 (46%), Gaps = 44/575 (7%)

Query: 46  GITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105
              Q+V+   +   E  K+VR+   + + G V ++ A+       T   E+    I  L+
Sbjct: 31  SDIQLVSLAKNGALEKLKAVRANSPVAVRGKVKAKQAKGSEME-KTDPWEIQVDDIRTLN 89

Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE--NFI 162
                  P     +       K RFL LR D  L   +  R ++ N  +  +      F+
Sbjct: 90  -----DFPSDIIMKSDTVFPPKQRFLQLRSDSELRDALRFRAQVHNVCKEELEQCRPPFV 144

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
           E  TP+L  S+PEGAR+FLVP+R  +G  YALPQ+PQQYKQ+LMASG  RYFQ A CFRD
Sbjct: 145 EIETPLLFKSTPEGAREFLVPTR-KRGLAYALPQSPQQYKQILMASGIPRYFQFARCFRD 203

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           ED R+DR P EF QLDMEMSF   +D++ T+E ++R ++         S  F R+ Y DA
Sbjct: 204 EDLRADRQP-EFTQLDMEMSFATGEDVMRTVEGIIRRLWSTLMKDPAPSGPFQRMSYQDA 262

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSE--FRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
           + RYG+DKPD R  + +  + EH +  +   ++    L +   +++          +   
Sbjct: 263 MSRYGSDKPDTRFGMEISRI-EHLLPVDLVSKITPLTLPIVEVFKLENNENDPAAMSEFI 321

Query: 341 CDRMNEWA------RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
              ++  A        +G PG+    +  D    + G+ P          E +   L++ 
Sbjct: 322 SQFLDSPAGVPFNNNPEGGPGI----FVYDAKKPLCGLQP----FGFEAAEYLEELLELD 373

Query: 395 DGDSCFFIAGDPLKFCSFA---ADARNHI---AQELGIIN-CNCFEFCWIMDFPFYEWNE 447
            GD     A +   F   +    D R  +   A   G       F+F WI+DFP +  + 
Sbjct: 374 HGDLIVIQAREKAPFSGGSTPIGDLRRALHSAAVSSGFKPAPTGFDFRWIVDFPLFSPSS 433

Query: 448 EEK-------KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           + +        I   H+PFT P+      L   D   + A  YDLV NG E+  G  R H
Sbjct: 434 DSEPGQGGAAGISSTHHPFTAPKTAADVDLLLTDPTKVVADHYDLVVNGVELGGGSRRIH 493

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
            + V      ++          F  L  A + G PPH G+A G DR+V ++LG ++VR+V
Sbjct: 494 DATVQEFILRDILQMPAERLADFSHLLEALRAGCPPHAGLALGFDRLVAVMLGKESVRDV 553

Query: 560 SLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVE 593
             FP       D ++ +PS ++ E L    L++ E
Sbjct: 554 IAFPKIGKVGEDPMVKAPSVMTEEALETYHLQLKE 588


>gi|225558824|gb|EEH07107.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 578

 Score =  357 bits (917), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 180/592 (30%), Positives = 277/592 (46%), Gaps = 49/592 (8%)

Query: 36  IIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINA------ 87
           + F+ + D       Q++A   +  FE  KS+ +   + + G+V  + A +         
Sbjct: 1   MAFVRLTDPTLSQNVQIIAFAKNDSFEKLKSIEANSPVVVQGVVQQKQASSKEKTAAEQD 60

Query: 88  NIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRT 146
              T  +E+S + I  L+       P             + R L +R D  L   ++ R 
Sbjct: 61  EAKTDCVEISLEDIHPLNE-----FPKDIIMTSDTVFPAEKRHLQIRTDSKLRDALLFRA 115

Query: 147 RIINSMRCRMIAEN--FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           R  N +R  +      F+E  TP+L  S+PEGAR+FLVP+R  +G  YALPQ+PQQYKQ+
Sbjct: 116 RARNVLREVLEECQLPFVEIETPLLFKSTPEGAREFLVPTR-RRGMAYALPQSPQQYKQI 174

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           LMASG  RY+Q A CFRDED R+DR P EF QLD+EMSF   +D++  +E  ++ ++   
Sbjct: 175 LMASGIPRYYQFARCFRDEDLRADRQP-EFTQLDLEMSFATGEDVMAIIEAAVKRLWSSL 233

Query: 265 SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
            +    S +F R+ Y DA+ +YG+DKPD+R  + +  + EH +  +       L      
Sbjct: 234 MSEPLPSGSFPRLSYGDAMAKYGSDKPDVRIGMEIKRI-EHMIPVDLVSKISPLHNPIVE 292

Query: 325 EVWAIPAKGGGGNRAFCDRM-------NEWARSQGQPGLAYIFWRLDESGNVAGMGPVAK 377
            +     +     R F +         N     +G PG A+++   D    ++G+ P   
Sbjct: 293 AIKLEGNENPEEMRKFLNSFMDSPEASNFHKNPEGGPG-AFVY---DSRKPLSGLQP--- 345

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC---SFAADARNHIAQE-LG---IINCN 430
                 T  +   LD++DGD     A     F    +   D R  I +  +G   I +  
Sbjct: 346 -FGFEATWVLEQELDLKDGDLLIIQARKNAPFSGGSTPLGDLRREIHKAAVGATLISSPT 404

Query: 431 CFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQY 482
            F F W+ DFP +    + +        I   H+PFT P +    SL   D   + A  Y
Sbjct: 405 GFHFLWVRDFPLFSPITDSEPGQGGAAGIASTHHPFTAPLRKSDVSLLLTDPTKVIADHY 464

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DLV NG E+  G  R H + V      ++          F  L  A + G PPH GIA G
Sbjct: 465 DLVVNGVELGGGSRRIHSAAVQEFILRDILKMPADRLADFSHLLEALRAGCPPHAGIALG 524

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            DR+V ++LG +++R+V  FP S    DLL+  PS ++ E LR   L++ ++
Sbjct: 525 FDRLVAVMLGKESLRDVIAFPKSGKGEDLLVKCPSEMTEESLRTYHLQLRDD 576


>gi|296421241|ref|XP_002840174.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636387|emb|CAZ84365.1| unnamed protein product [Tuber melanosporum]
          Length = 593

 Score =  357 bits (916), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 178/613 (29%), Positives = 266/613 (43%), Gaps = 63/613 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGI---IFLDIR--DHYGITQVVANPDSACFEIAK-------SV 65
           G  V L G+   VR  G      F      D     +VV+  DS   +I K       S+
Sbjct: 2   GEEVVLHGYFGPVRKAGKFLYFSFFHDYSSDPPRPLKVVSVIDSLSPQITKAAHQTLGSL 61

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESI 124
                + +  +V   +         + + +EL  ++I  L+   E  +        PE  
Sbjct: 62  HRFTPVALRAIVYKCAPPKSPEKRKSDEEVELRVKEIIPLNSVSENLIYTAKTIFPPE-- 119

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
               R L LR        ++ R+R  +  R  +   +F+E  TP+L  S+PEGAR+FLVP
Sbjct: 120 ---KRHLQLRTTKELCIALRLRSRTASECRKFLEENDFLEVETPLLFKSTPEGAREFLVP 176

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R   G+ YALPQ+PQQYKQ+LMASG  RY+Q+A CFRDED R+DR P EF QLD+EMSF
Sbjct: 177 TRKGDGTCYALPQSPQQYKQILMASGVPRYYQLAKCFRDEDLRADRQP-EFTQLDLEMSF 235

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP-IIMHNV 302
              DD+++ +E ++  +++   +       F R+ Y  A++ YGTDKPD R P   + N+
Sbjct: 236 ATSDDVMDLVEGLVIRIWKNVLDVCVGPG-FKRVPYWWAMKNYGTDKPDFRYPNHRIKNL 294

Query: 303 TEHFVH-------SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
            E   +        E   F                 K    N +  D  N  A   G   
Sbjct: 295 HEVLPYLAKGDRFVEGFAFYGNTPNYNMDHAIEFLEKFKRENLSTRDD-NYVAYIAGAGN 353

Query: 356 --LAYI-----FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
              AYI      WR  +  N+ G   V +         I+ R     G            
Sbjct: 354 ETQAYIEGGMELWRDADLANIHGALWVHR---PGAIVVIKERRGYYSGG----------- 399

Query: 409 FCSFAADAR----NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK-------IDFAHN 457
             +     R    N   ++  I + + + F W++DFP +     +             H+
Sbjct: 400 -NTKLGLLRSALLNKAIEQKFISSRSDYAFVWVIDFPLFSPTSADDPGQSGRAPFSSTHH 458

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           PFT P      L G+    ++A  YDLV NG E+  G  R H + +       V      
Sbjct: 459 PFTAPIAEDIQLLGSSPHRVRAEHYDLVVNGTELGGGSRRIHEAALQKYILEKVLKMPRE 518

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
              +F  L      G PPH GIA G DR++ +++G  ++R+V  FP +    D+++GSPS
Sbjct: 519 KLQQFDHLLEVLDSGCPPHAGIALGFDRLIAVMMGRDSIRDVIAFPKNSKGADVMVGSPS 578

Query: 578 TVSVEQLRELGLR 590
            V  ++L+  GLR
Sbjct: 579 VVPDKELQAYGLR 591


>gi|323335037|gb|EGA76327.1| Msd1p [Saccharomyces cerevisiae Vin13]
          Length = 658

 Score =  356 bits (913), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 171/648 (26%), Positives = 267/648 (41%), Gaps = 71/648 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRV--RPHGGIIFLDIRDHYGITQVVANPDSAC 58
           + R  T +   L     G  + L+GW+ +   R    +IF  +RD  G    + +  S  
Sbjct: 30  LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKS-- 87

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
             + K    E V+   G++   S +   +N    + E+  + I +L+ + + P  +   +
Sbjct: 88  --LLKGFTLEDVVQAVGIL---SLKRKLSNEDADEYEVQLEDITVLNASNKKPAQMQDFK 142

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                   ++R+L LR       + KR+ I   +R      +F E  TP+L  ++PEGAR
Sbjct: 143 LS-AIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATPEGAR 201

Query: 179 DFLVPSRVNQGS----FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           +FLVP+R  +      FYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR P EF
Sbjct: 202 EFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQP-EF 260

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG-----------------NTVSNNFLRI 277
            Q+DMEM+F   +D++  +E  +   + +FS                      + +  R+
Sbjct: 261 TQVDMEMAFANSEDVMKIIEKTVSXXWSKFSKKRGLLTLDSKGTLVPAKKENGTVSIFRM 320

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y+ A+  YG DKPDLR P +     +     EF  FS  L+         I        
Sbjct: 321 TYEQAMTSYGIDKPDLRAPDL-----KIINLGEFNAFS-HLNKKFPVFEVIILRNAFSNM 374

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRL--DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             + +R +    +        I   +  DE  N              N   I   L ++ 
Sbjct: 375 EEYKERWSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPHLITKFLKLKK 434

Query: 396 GDSCFFIAGDPLKFC----SFAADAR-NHIAQELGIINCNCFEFC------WIMDFPFYE 444
           GD       +P        +     R   +  E G    N +         WI+DFP + 
Sbjct: 435 GDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHG---KNIYHAVNKDVASWIVDFPLFS 491

Query: 445 W----------------NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
                              E+ ++   H+PFTM +                  YDLV NG
Sbjct: 492 PVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCLGXHYDLVVNG 551

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
            E+  G  R H   +    F ++       E  FG L  AF  G PPH G A G DR+  
Sbjct: 552 VELGGGSTRIHDPRLQDYIFEDILKIDNAYE-LFGHLLNAFDMGTPPHAGFAIGFDRMCA 610

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           ++   +++R+V  FP S    DL++ SPS +    L    ++   + K
Sbjct: 611 MICETESIRDVIAFPKSITGADLVVKSPSVIPESILEPYNIKYSNSKK 658


>gi|289615759|emb|CBI57500.1| unnamed protein product [Sordaria macrospora]
          Length = 644

 Score =  355 bits (912), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 176/642 (27%), Positives = 274/642 (42%), Gaps = 81/642 (12%)

Query: 18  GSFVRLSGWVHRVR-PHGGIIFLDIRDHYG---ITQVVANPDSACFEIA----KSVRSEW 69
           G+ V + G++ R R     ++F DI+   G           D +  ++A    ++V    
Sbjct: 15  GTRVTVHGFLQRRRVKSSKLVFADIQVENGPSVQVTATFKEDGSPEQLATKALRAVPLYS 74

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            +C+ G V   +           +++L+   I+ L+   +  +   G +          R
Sbjct: 75  PVCVTGTVAQLNGS---------RVDLNLDAIQPLNAFPKDIIVSEGVQ-----FPASAR 120

Query: 130 FLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
            L +R  D L   ++ R +I   +R  +   +F E  TPIL  S+PEGAR+FLVP+R  +
Sbjct: 121 HLQIRFSDPLRSRLLARPQIGFQLRKTLNDLDFTEVETPILFKSTPEGAREFLVPTR-RR 179

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G  YALPQ+PQQYKQ+LM+SG   Y+Q A CFRDED R+DR P EF QLDMEM F   +D
Sbjct: 180 GLAYALPQSPQQYKQILMSSGIRGYYQFARCFRDEDLRADRQP-EFTQLDMEMGFATGED 238

Query: 249 ILNTMENVLRGVFEEFS-------------------------------NGNTVSNNFLRI 277
           ++ T+E ++  +    +                                    +  FLR+
Sbjct: 239 VMRTVETLVTELLPALNAQFNIVKSGDDIYPVPKRGLNNGESIEDGDIKWPEPTAPFLRL 298

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            YD+A+ R+G DKPDLR P   H V EH + ++F                  P   G   
Sbjct: 299 TYDEAMTRFGIDKPDLRIPFEFHRV-EHILPAQFVSMITHTEQPIVEVFRIRPQLDGEIT 357

Query: 338 R-----AFCDRMNEWARSQGQPG--LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR 390
                  F D++ +            A      +    + G+  +          ++   
Sbjct: 358 TPGTIAEFVDKLMDQLPKPLAKNPDGAPAALMFNSKKPLCGLSSLG-FEGFDALTSMEEF 416

Query: 391 LDMQDGDSCFFIAGDPLKFC----SFAADARNHIAQEL---GIINCN-CFEFCWIMDFPF 442
            D++DGD   F A     F     +    AR H        G++  +   +F W+++FP 
Sbjct: 417 SDLEDGDVLVFQARKNAPFQGEGSTALGVARTHFYHSFVSAGLLPRSFDLKFLWVVNFPM 476

Query: 443 YEWNEE-------EKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
           +  ++        +      H+PFT P       L   D L  +A  YDLV NG E+  G
Sbjct: 477 FTPDDGIDPGQGGQAGFKATHHPFTAPLTEDDVELLATDPLKARADHYDLVVNGVELGGG 536

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
             R H+S +      N+    +    +F  L  A + G PPH G A G DR+V +L    
Sbjct: 537 SRRIHLSSMQEYVMRNILKMTDAGLAQFSHLLEALRAGCPPHAGFALGFDRLVAVLTHTD 596

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           +VR+V  FP S    DL + SPS ++ +QL    L I +  +
Sbjct: 597 SVRDVIAFPKSMKGEDLTVKSPSRMTTQQLETYHLAIAKKEE 638


>gi|255731071|ref|XP_002550460.1| hypothetical protein CTRG_04758 [Candida tropicalis MYA-3404]
 gi|240132417|gb|EER31975.1| hypothetical protein CTRG_04758 [Candida tropicalis MYA-3404]
          Length = 679

 Score =  355 bits (912), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 179/660 (27%), Positives = 301/660 (45%), Gaps = 88/660 (13%)

Query: 6   THSCGDLGVSDVGS-------FVRLSGWVHRV---RPHGGIIFLDIRDHYGITQVVANP- 54
           TH+   +  S++          V L+G ++R    RP  G  FL   +   I  +     
Sbjct: 36  THTIKSIN-SNIDKFLNKQQTKVTLNGHINRKSRIRPALGFGFLRDINGDEIQLLATPEF 94

Query: 55  -DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL 112
            + + FE+ K +  E  + + G +  + ++         ++EL  +  +IL+ +  +   
Sbjct: 95  TNESIFELMKRLTVEDSVSVSGFIQQKQSKNGKT-----ELELVVENFQILNSSNLDASR 149

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTA 171
               +   PE I  ++R+L LR     K++  R++    +R      + F+E  TP+L  
Sbjct: 150 LDKLKHNNPEDIPPQFRYLQLRTPYYQKSLRLRSQAAQLIREIFTKNHGFVEIETPLLFK 209

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           S+PEGAR+FLVP+R     FYALPQ+PQQYKQ+LM+SG  RYFQIA CFRDED RSDR P
Sbjct: 210 STPEGAREFLVPTRSF-NKFYALPQSPQQYKQILMSSGITRYFQIAKCFRDEDLRSDRQP 268

Query: 232 GEFYQLDMEMSFVEQDDILNTM-ENVLRGVFEEFSN------------------GNTVSN 272
            EF Q+D+EMSF+   D +  + E+V+  V+ +                       T + 
Sbjct: 269 -EFTQIDLEMSFINNSDQVGIVVEDVVHNVWNKIGGKPTYKVNQDGYLEEITHEMGTNTL 327

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            F ++ Y DA+ +YG DKPDLR+ +   ++ + F   E   F  ++ ++   + +   AK
Sbjct: 328 QFNKLNYIDALTKYGIDKPDLRSSLTFTSLEDFFFAKENDEFP-VVEISILKQAFKPGAK 386

Query: 333 GGGGNRAFCDRMNEWARSQ-----GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI 387
                ++F D  N  AR        +P  A I+++     NV     +A       T+ +
Sbjct: 387 KYKLPKSFTDDHNFPARRPYIWAVNKPDDATIWYKKLMEANV-----IAPTNAFDETK-L 440

Query: 388 RVRLDMQDGDSCFFIAGDPLKFCSF--AADARNHIAQEL------------GIINCNCFE 433
           +  L++Q GD           + +       R    +E              + + +  +
Sbjct: 441 QNLLNLQPGDVFAVSTRSKFPYENPTPLGKFRQLAIKEFPTKWQRPILKDGQLTSDHNID 500

Query: 434 FC----WIMDFPFYEWNE----------------EEKKIDFAHNPFTMPQGGMESLKGND 473
                 W+++FP +   E                +  K +  H+PFTM +     L  +D
Sbjct: 501 DVVVGSWVVNFPLFNPVEISDSPDNETTIKYPKYDYNKFESTHHPFTMAKIEDYELLESD 560

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
            L ++   YDLV NG E+  G  R H  ++    F  + +     +  FG L +A   G 
Sbjct: 561 PLKVRGEHYDLVINGVEVGGGSRRIHDPDLQQYIFEEI-LQISNFQELFGHLLKALSMGC 619

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PPH G+A G DR+  +L+G+ ++R+V  FP +Q+  D ++ SP+ V  + L E  +   +
Sbjct: 620 PPHAGLALGFDRLCAMLIGSNSIRDVIAFPKNQSGVDPVVESPTGVKEQTLNEYYITTKK 679


>gi|295114803|emb|CBL35650.1| Aspartyl-tRNA synthetase [butyrate-producing bacterium SM4/1]
          Length = 401

 Score =  354 bits (908), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 158/391 (40%), Positives = 228/391 (58%), Gaps = 11/391 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
            R+H C +L   ++G  V + GWV + R  GGIIF+D+RD  G+ Q++          F 
Sbjct: 9   KRSHRCTELSTENIGENVTVMGWVQKSRNKGGIIFVDLRDRSGLLQIIFEEADCGSESFA 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ + G V +RS   +N N+ TG IE+ A  + ILS +E  P P+    + 
Sbjct: 69  KAEKLRSEFVIAVTGKVEARSG-AVNENLKTGAIEIRANALRILSESETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KYR+LDLRR  L KN++ R+R+    R  +  E F+E  TP L  S+PEGARD+
Sbjct: 128 KEELRLKYRYLDLRRPDLQKNLMTRSRVTTLTRAFLAEEGFLEIETPTLIKSTPEGARDY 187

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQIA C+RDED R+DR P EF Q+DME
Sbjct: 188 LVPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQIARCYRDEDLRADRQP-EFTQIDME 246

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SFV+ DD+L+  E +L+ +F+E    + +     R+ + +A+ R+G+DKPDLR  + + 
Sbjct: 247 LSFVDVDDVLDVNERLLKKLFKEICGFD-LQLPIQRMTWREAMDRFGSDKPDLRFGMELK 305

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+E     +F VF   L             + G   R   D + E+A+  G  GLAY+ 
Sbjct: 306 NVSETVKDCQFVVFKSALENGGSVRGINAEGQAG-MPRKKIDALVEFAKGFGAKGLAYLA 364

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRL 391
              D     +     AK +      A+   +
Sbjct: 365 VLEDG----SYKSSFAKFMTEEELAALVKAM 391


>gi|145616054|ref|XP_001415131.1| hypothetical protein MGG_13512 [Magnaporthe oryzae 70-15]
 gi|145009821|gb|EDJ94477.1| hypothetical protein MGG_13512 [Magnaporthe oryzae 70-15]
          Length = 660

 Score =  353 bits (907), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 193/651 (29%), Positives = 276/651 (42%), Gaps = 80/651 (12%)

Query: 17  VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYG----ITQVVANPDS---ACFEIAKSVRSE 68
           VG  V + G++ + R     + F+DI    G    +    +  DS      +  KSV + 
Sbjct: 19  VGQKVTVHGFLQKRRDRSSRLSFVDIVVDNGPRLQLKSEWSEKDSPAHMAHQQLKSVPAW 78

Query: 69  WVLCIDGLVMSRSAETINANIIT----GQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
             + +   V S        +  +    G+      ++E+  V+ +   P   +    + +
Sbjct: 79  SSVAVTAHVSSLKDGGNTGSTPSSFAGGRFPPGVNEVELELVSIQALNPWPKDIIVSDGV 138

Query: 125 RF--KYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +F    R L LR  DTL + +  R  + +S+   +  ENF E  TPIL  S+PEGAR+FL
Sbjct: 139 QFPATARHLQLRFSDTLRERMRFRQHVKSSVTACLEKENFSEVETPILFKSTPEGAREFL 198

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VP+R   G  YALPQ+PQQYKQ LMA+GF  YFQ A CFRDED R+DR P EF QLDMEM
Sbjct: 199 VPTR-RPGLAYALPQSPQQYKQTLMAAGFGGYFQFARCFRDEDLRADRQP-EFTQLDMEM 256

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGN--------------------------------- 268
           SF   +D++ T+E +++ ++   +                                    
Sbjct: 257 SFATGEDVMRTVEMLIKQLYNNVATNFVQVVDTDGWHPVSRKRQCGKRGSSEESVRDFPS 316

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
                  R+ Y D +  YG+DKPDLR P  +  V          + S+I   NP  + W 
Sbjct: 317 IDDGPLPRMSYQDVMSLYGSDKPDLRIPGQIERVEHVLPAQFVSMISEI--DNPIIDCWR 374

Query: 329 IPAKGGGGNR--AFCDRM--NEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
               GG   +   F  ++  N        P    +    D S  + G       L     
Sbjct: 375 CTLDGGSPRKYQKFFSKILSNLPLGLNRNPDGEPVILVHDSSKPLNGFSS----LGFEAA 430

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKF---CSFAADARNHIAQEL---GIINCN-CFEFCWI 437
           E +    DMQDGD     A     F    +     R+ I  E      I  +  F+F W+
Sbjct: 431 EKL--TSDMQDGDVLILQARKNRPFEGGSTALGTLRSLIYNEAVAAEYIPADPSFKFLWV 488

Query: 438 MDFPFYEWNEEEK---------KIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQYDLVCN 487
             FP +    E                H+PFT P       L   D L  KA  YDLV N
Sbjct: 489 TGFPLFTPANEGTTDPGQGGSAGFSSTHHPFTAPLTSQDFELLATDPLRAKADHYDLVLN 548

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G E+  G  R H++ V    F ++    +    +F  L  A + G PPH G A G DR+V
Sbjct: 549 GCELGGGSRRIHVAHVQEFVFRSILRMTDTGVAQFRHLLEALRAGCPPHAGFALGFDRLV 608

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE-NPKK 597
            +L G  +VR+V  FP S    +   GSPS ++ EQL    LR+ +  P K
Sbjct: 609 AMLSGTGSVRDVIAFPKSMKGEEPFAGSPSFMTEEQLETYHLRLRDGKPVK 659


>gi|241948653|ref|XP_002417049.1| aspartyl-tRNA synthetase, mitochondrial [Candida dubliniensis CD36]
 gi|223640387|emb|CAX44638.1| aspartyl-tRNA synthetase, mitochondrial [Candida dubliniensis CD36]
          Length = 683

 Score =  353 bits (905), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 184/661 (27%), Positives = 293/661 (44%), Gaps = 93/661 (14%)

Query: 6   THSCGDLGVSDVG------SFVRLSGWVHRV-RPHGGIIFLDIRDHYGI-TQVVANP--- 54
           TH+   +  +         + V L+G VHR  R    + F  +RD  G   Q++A P   
Sbjct: 35  THTIKSIDSNIENYLNKQQTKVTLNGHVHRKSRIRPALGFAFLRDTNGDEIQLLATPKYT 94

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLP 113
           + + FE+ K +  E  + + G V  + ++         Q EL  +  +IL+ +  +    
Sbjct: 95  EPSIFELMKKLTVEDSVSVTGFVQPKESKM----GKDQQWELVVEDFQILNSSNLDAAQL 150

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRC-RMIAENFIECSTPILTAS 172
              +   P++I  ++R+L LR     K++  R+     +R   +   +F+E  TP+L  S
Sbjct: 151 DKLKHNSPQNIPPQFRYLQLRTPYYQKSLRLRSEAAKVIRNIFIENHDFVEIETPLLFKS 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           +PEGAR+FLVP+R     FYALPQ+PQQYKQ+LM+SGF RYFQ+A CFRDED RSDR P 
Sbjct: 211 TPEGAREFLVPTRSF-NKFYALPQSPQQYKQILMSSGFTRYFQVAKCFRDEDLRSDRQP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTM-ENVLRGVFEEFSNGNTV------------------SNN 273
           EF Q+D+EMSFV   D +  + E+V+  V+ +     T                   S  
Sbjct: 269 EFTQIDLEMSFVNNSDQVGIVVEDVIHNVWNKVGGKPTYKVNDEGFLEKVDLAEAGKSLQ 328

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           F ++ Y DA+ +YG DKPDLR+ +   ++ + FV  E   F  ++ V    E +   +  
Sbjct: 329 FNKLNYIDALVKYGIDKPDLRSNLSFISLEDIFVAKENADFP-VVEVCVLKEAFDASSGK 387

Query: 334 GGGNRAFCDRMNE-------WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386
               + F D  N        WA  +     +Y    +D +        +    +  +   
Sbjct: 388 YKLPKTFIDDHNFSSRRPYVWAIQKNDDTFSYFKKLIDAN--------IIATTDKFDESK 439

Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSF--AADARNHIAQELG------IINCNCFEFC--- 435
           ++  L++Q GD           + +       R    +E        II           
Sbjct: 440 LQELLNLQPGDILAVSTRAQFPYENPTPLGKFRQLAIEEFPHKWQRPIIENGQLSVDYDR 499

Query: 436 -------WIMDFPFYEWNEEE--------------------KKIDFAHNPFTMPQGGMES 468
                  W+++FP +   EE                     KK +  H+PFTM +     
Sbjct: 500 NDMVVGSWVVNFPLFNPVEESSLISSATQENLKPKYPLYNFKKFESTHHPFTMAKIEDYD 559

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           L   + L +    YDLV NG E+  G  R H   +    F  + +     +  FG L +A
Sbjct: 560 LLETNPLKVHGEHYDLVINGVEVGGGSRRIHDPALQQYIFEEI-LQISNFQQLFGHLLKA 618

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
              G PPH G+A G DR+  +L+G+ ++R+V  FP +Q+  D ++ SP+ V    L E  
Sbjct: 619 LSMGCPPHAGLALGFDRLCAMLVGSPSIRDVIAFPKNQSGVDPVVESPTGVKEATLNEYF 678

Query: 589 L 589
           +
Sbjct: 679 I 679


>gi|38567122|emb|CAE76417.1| related to aspartate--tRNA ligase, mitochondrial (fragment)
           [Neurospora crassa]
          Length = 683

 Score =  353 bits (905), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 178/643 (27%), Positives = 287/643 (44%), Gaps = 83/643 (12%)

Query: 18  GSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVAN-------PDSACFEIAKSVRSEW 69
           G+ V + G++ R R     ++F DI+   G +  V +       P+    +  ++V    
Sbjct: 54  GNKVTVHGFLLRRRVKSSKLVFADIQVENGPSVQVTSTFKEDGSPEQLVTKALRAVPLYS 113

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G V         A +   +I+L+  +I+ L+   +  +   G +          R
Sbjct: 114 PVSVTGTV---------ARLHGNRIDLNLDRIQSLNAFPKDIIVSEGVQ-----FPASAR 159

Query: 130 FLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
            L +R  D L   ++ R +I   +R  +   +F E  TPIL  S+PEGAR+FLVP+R  +
Sbjct: 160 HLQIRFSDPLRSRLLARPQIGFQLRKTLNDLDFTEVETPILFKSTPEGAREFLVPTR-RR 218

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G  YALPQ+PQQYKQ+LM+SG   Y+Q A CFRDED R+DR P EF QLD+EM F   +D
Sbjct: 219 GLAYALPQSPQQYKQILMSSGIRGYYQFARCFRDEDLRADRQP-EFTQLDLEMGFATGED 277

Query: 249 ILNTMENVLRGVFEEFS-------------------------------NGNTVSNNFLRI 277
           ++ T+E ++  +    +                                    +  FLR+
Sbjct: 278 VMRTVETLVTQLLPALNAQFNVIRQGDDIYPVPKRDLNNGESTENGDHQWPEPTAPFLRL 337

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            YD+A+ R+G DKPDLR P  +H V +H + ++F V     +  P  E + I  +  G  
Sbjct: 338 TYDEAMTRFGIDKPDLRIPFELHRV-DHVLPAQF-VSMITHTEQPIVEAFRIRPQFDGET 395

Query: 338 RA------FCDRM-NEWARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV 389
                   F D++ ++  +     P  A      +    + G+  +          ++  
Sbjct: 396 VTPGTIAEFVDKLMDQLPKPLANNPDGAPAALMFNSKKPLCGLSSLG-FEGFDALTSMEA 454

Query: 390 RLDMQDGDSCFFIAGDPLKFC----SFAADARNHIAQEL---GIINCN-CFEFCWIMDFP 441
             D++DGD   F A     F     +    AR H  +     G++  +   +F W+++FP
Sbjct: 455 FSDLEDGDVLVFQARKNAPFQGEGSTALGVARTHFYRSFVSAGLLPQSFDLKFLWVVNFP 514

Query: 442 FYEWNEE-------EKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
            +  ++        +      H+PFT P       +   D L  +A  YDLV NG E+  
Sbjct: 515 MFTPDDGIDPGQGGQAGFKATHHPFTAPLTEADVEMLATDPLKARADHYDLVVNGVELGG 574

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  R H+S +      N+    +    +F  L  A + G PPH G A G DR+V +L   
Sbjct: 575 GSRRIHLSSMQEYVMRNILKMTDAGLAQFSHLLEALRAGCPPHAGFALGFDRLVAILTHT 634

Query: 554 KNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            +VR+V  FP S    DL + SPS ++ +QL    L I +  +
Sbjct: 635 DSVRDVIAFPKSMKGEDLTVKSPSKMTAQQLETYHLAIAKKEE 677


>gi|50289245|ref|XP_447053.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526362|emb|CAG59986.1| unnamed protein product [Candida glabrata]
          Length = 659

 Score =  352 bits (904), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 173/630 (27%), Positives = 278/630 (44%), Gaps = 64/630 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRV--RPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           +     G+ + L+GW+     R    +IF  +RD  G    + + +S    + +  + E 
Sbjct: 36  VRELVTGADIVLNGWIDSKPKRISKSLIFGQLRDSNGDRVQLVDTNS----LLRKCKVED 91

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI-RFKY 128
           V+ + G V     ET ++N+   + E+    ++ L+ A + P  +   R+    +   ++
Sbjct: 92  VVQVRGKVQL-KRETGSSNLDNKKFEVVVDHVKTLNAANKKPSELKELRDTSPELVPPEF 150

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R++ LR       +  R  +  ++R  +  + F E  TP L  ++PEGAR+F+VP+RV+ 
Sbjct: 151 RYIQLRTARYQNYLRTRYEVSKTLRQILDQDGFTEIETPTLFKATPEGAREFMVPTRVSA 210

Query: 189 G---------SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                      FYAL Q+PQQYKQLLMASG  +YFQ A C+RDED R+DR P EF QLDM
Sbjct: 211 KIKQVDKIVPMFYALTQSPQQYKQLLMASGVPKYFQFARCYRDEDLRADRQP-EFTQLDM 269

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------RICYDDAIR 284
           EMSF  Q D+++ +E  +  V+++F    +     L               R+ Y +A+ 
Sbjct: 270 EMSFASQKDVMSVIEKCITSVWKKFRTKESTGLLTLDRNHSLTPTDASNLYRMTYKEAMT 329

Query: 285 RYGTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
            YG DKPDLR P + + N+ E   +S     +    +     +           + +   
Sbjct: 330 NYGIDKPDLRAPSLRILNMKELGAYSN---INPAFPIFEIMIIKKAFTDKNDYKKKWSFL 386

Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403
            N+   +  +P +  I   L+          +A      NT  +   + ++ GD      
Sbjct: 387 SNDDNYNYRKPIVVPISTDLETKNWYEKFMRIASF---ENTHMLNKAIRLEVGDIVVGSN 443

Query: 404 G--DPLKFCSF--AADARNHIAQELG----IINCNCFEFCWIMDFPFYEWNE-------- 447
              D   F +      AR  I Q       +   N     W++DFP     E        
Sbjct: 444 REIDTRIFENPTPLGRARQLILQNNETKDIVRETNKDVAVWVVDFPLLSPKETEIKNTKH 503

Query: 448 -------EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
                  E++ +   H+PFTM Q         + +      YDLV NG E+  G  R H 
Sbjct: 504 KEMYPIYEDRTVISTHHPFTMVQLQDYDKLTTNPIDCLGQHYDLVMNGIELGGGSTRIHD 563

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            E+    F    +     +  FG L  AF+ G PPH G A G DR+  +L G  ++R+V 
Sbjct: 564 PELQKFMF-ENVLKISNYQILFGHLLSAFETGTPPHAGFAIGYDRMCAMLCGTDSIRDVI 622

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            FP S    DL++ SPST++ + LR+  + 
Sbjct: 623 PFPKSITGSDLVVQSPSTIAEDILRDYKIE 652


>gi|323306992|gb|EGA60276.1| Msd1p [Saccharomyces cerevisiae FostersO]
          Length = 640

 Score =  352 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 171/648 (26%), Positives = 265/648 (40%), Gaps = 71/648 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRV--RPHGGIIFLDIRDHYGITQVVANPDSAC 58
           + R  T +   L     G  + L+GW+ +   R    +IF  +RD  G    + +  S  
Sbjct: 8   LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKS-- 65

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
             + K    E V+   G++   S +   +N    + E   + I +L+ + + P  +   +
Sbjct: 66  --LLKGFTLEDVVQAVGIL---SLKRKLSNEDADEYEXQLEDITVLNASNKKPAQMQDFK 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                   ++R+L LR       + KR+ I   +R      +F E  TP+L  ++PEGAR
Sbjct: 121 LS-AIXPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATPEGAR 179

Query: 179 DFLVPSRVNQGS----FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           +FLVP+R  +      FYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR P EF
Sbjct: 180 EFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQP-EF 238

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG-----------------NTVSNNFLRI 277
            Q+DMEM+F   +D++  +E  +  V+ +FS                      + +  R+
Sbjct: 239 TQVDMEMAFANSEDVMKIIEKTVSEVWSKFSKKRGLLTLDSKGTLVPAKKENGTVSIFRM 298

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y+ A+  YG DKPDLR P +     +     EF  FS  L+         I        
Sbjct: 299 TYEQAMTSYGIDKPDLRAPDL-----KIINLGEFNAFS-HLNKKFPVFEVIILRNAFSNM 352

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRL--DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             + +R +    +        I   +  DE  N              N   I   L ++ 
Sbjct: 353 EEYKERWSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATFENPHLITKFLKLKK 412

Query: 396 GDSCFFIAGDPLKFC----SFAADAR-NHIAQELGIINCNCFEFC------WIMDFPFYE 444
           GD       +P        +     R   +  E G    N +         WI+DFP + 
Sbjct: 413 GDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHG---KNIYHAVNKDVASWIVDFPLFS 469

Query: 445 W----------------NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
                              E+ ++   H+PFTM +                  YDLV NG
Sbjct: 470 PVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKCLGQHYDLVVNG 529

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
            E+  G  R H   +    F ++       E  FG L  A   G PPH G A G DR+  
Sbjct: 530 VELGGGSTRIHDPRLQDYIFEDILKIDNAYE-LFGHLLNAXDMGTPPHAGFAIGFDRMCA 588

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           ++   +++R+V  FP S    DL++ SPS +    L    ++     K
Sbjct: 589 MICETESIRDVIAFPKSITGADLVVKSPSVIPESILEPYNIKYSNXKK 636


>gi|164427859|ref|XP_965716.2| hypothetical protein NCU02585 [Neurospora crassa OR74A]
 gi|157071912|gb|EAA36480.2| hypothetical protein NCU02585 [Neurospora crassa OR74A]
          Length = 644

 Score =  350 bits (897), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 178/643 (27%), Positives = 287/643 (44%), Gaps = 83/643 (12%)

Query: 18  GSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVAN-------PDSACFEIAKSVRSEW 69
           G+ V + G++ R R     ++F DI+   G +  V +       P+    +  ++V    
Sbjct: 15  GNKVTVHGFLLRRRVKSSKLVFADIQVENGPSVQVTSTFKEDGSPEQLVTKALRAVPLYS 74

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G V         A +   +I+L+  +I+ L+   +  +   G +          R
Sbjct: 75  PVSVTGTV---------ARLHGNRIDLNLDRIQSLNAFPKDIIVSEGVQ-----FPASAR 120

Query: 130 FLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
            L +R  D L   ++ R +I   +R  +   +F E  TPIL  S+PEGAR+FLVP+R  +
Sbjct: 121 HLQIRFSDPLRSRLLARPQIGFQLRKTLNDLDFTEVETPILFKSTPEGAREFLVPTR-RR 179

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G  YALPQ+PQQYKQ+LM+SG   Y+Q A CFRDED R+DR P EF QLD+EM F   +D
Sbjct: 180 GLAYALPQSPQQYKQILMSSGIRGYYQFARCFRDEDLRADRQP-EFTQLDLEMGFATGED 238

Query: 249 ILNTMENVLRGVFEEFS-------------------------------NGNTVSNNFLRI 277
           ++ T+E ++  +    +                                    +  FLR+
Sbjct: 239 VMRTVETLVTQLLPALNAQFNVIRQGDDIYPVPKRDLNNGESTENGDHQWPEPTAPFLRL 298

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            YD+A+ R+G DKPDLR P  +H V +H + ++F V     +  P  E + I  +  G  
Sbjct: 299 TYDEAMTRFGIDKPDLRIPFELHRV-DHVLPAQF-VSMITHTEQPIVEAFRIRPQFDGET 356

Query: 338 RA------FCDRM-NEWARSQ-GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV 389
                   F D++ ++  +     P  A      +    + G+  +          ++  
Sbjct: 357 VTPGTIAEFVDKLMDQLPKPLANNPDGAPAALMFNSKKPLCGLSSLG-FEGFDALTSMEA 415

Query: 390 RLDMQDGDSCFFIAGDPLKFC----SFAADARNHIAQEL---GIINCN-CFEFCWIMDFP 441
             D++DGD   F A     F     +    AR H  +     G++  +   +F W+++FP
Sbjct: 416 FSDLEDGDVLVFQARKNAPFQGEGSTALGVARTHFYRSFVSAGLLPQSFDLKFLWVVNFP 475

Query: 442 FYEWNEE-------EKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
            +  ++        +      H+PFT P       +   D L  +A  YDLV NG E+  
Sbjct: 476 MFTPDDGIDPGQGGQAGFKATHHPFTAPLTEADVEMLATDPLKARADHYDLVVNGVELGG 535

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  R H+S +      N+    +    +F  L  A + G PPH G A G DR+V +L   
Sbjct: 536 GSRRIHLSSMQEYVMRNILKMTDAGLAQFSHLLEALRAGCPPHAGFALGFDRLVAILTHT 595

Query: 554 KNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            +VR+V  FP S    DL + SPS ++ +QL    L I +  +
Sbjct: 596 DSVRDVIAFPKSMKGEDLTVKSPSKMTAQQLETYHLAIAKKEE 638


>gi|165971540|gb|AAI58403.1| LOC100145033 protein [Xenopus (Silurana) tropicalis]
          Length = 403

 Score =  348 bits (893), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 136/407 (33%), Positives = 206/407 (50%), Gaps = 19/407 (4%)

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+PQQ+KQLL+  G DRYFQIA C+RDE  + DR P EF Q+D+EMSFV+Q  I + +E 
Sbjct: 1   QSPQQFKQLLIIGGLDRYFQIARCYRDEGSKPDRQP-EFTQVDIEMSFVDQAGIQSLVEG 59

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           +LR  + E      +   F  + Y DA+  YG DKPD R  + + +VT  F   +     
Sbjct: 60  MLRFSWPEEKGP--LQAPFPVMSYADAMSSYGVDKPDTRFEMKIQDVTSQFREVQLGYVQ 117

Query: 316 KILSVNPGYEVWAIPAKGGGG--NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMG 373
           + L   P   V AI   GG     R   D M E  + Q    +  +  R D     +   
Sbjct: 118 ETLR-KPHGCVKAICIPGGAKFIKRKELDSMQELVKQQYNQEVVPVILRAD----SSWKS 172

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-----IIN 428
           P+ K L+    E++   ++ +  D   F AG+ ++ CS     R   A +L      + +
Sbjct: 173 PLEKFLSAKLKESLTEAMEAKSEDILLFAAGEHIRACSALGKLRLDAAAQLEEYGVPLRD 232

Query: 429 CNCFEFCWIMDFPFYEWNEE-EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F F W++DFP +   E+ E +++ AH+PFT P     +L   D   +++  YDLV N
Sbjct: 233 PTAFHFLWVVDFPLFLPKEDNELELESAHHPFTAPHPEDTALLHTDPAKVRSQHYDLVLN 292

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G E+  G IR H S +      +V      +      L  A Q G PPHGGIA G+DR++
Sbjct: 293 GSEVGGGSIRIHNSNLQRWVLQDVLKEDVSL---LSHLLEALQSGAPPHGGIALGLDRLI 349

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
            +++GA ++R+V  FP S    DL+  +P  VS E L++  ++++  
Sbjct: 350 AIIVGAPSIRDVIAFPKSFRGRDLMSNAPDMVSAEDLQQYHIQVIPP 396


>gi|163785825|ref|ZP_02180304.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159878906|gb|EDP72931.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 351

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 115/357 (32%), Positives = 183/357 (51%), Gaps = 14/357 (3%)

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           +D++   E ++  + +  ++ N   N F R+ Y +AI +YG+DKPD+R  + + ++++  
Sbjct: 2   EDVMAVSEGLIHTLLK--TSWNRFKNTFKRMTYQEAIEKYGSDKPDIRFEMHLKDISDIA 59

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366
              EF+VF   +      +   I   G   +R   D + E+A+  G  G+A+I       
Sbjct: 60  KEVEFKVFKDTIEKGGIVKGLTI-EGGASFSRKEIDDLTEYAKKFGAKGMAWIKIT---- 114

Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426
                  P+ K       + I+ +++ + GD   FIA             R HIA +L I
Sbjct: 115 -EEGFQSPITKFFTEDQLQKIKEKMNAKAGDLMVFIADVHETTHRVLGFMRKHIADKLNI 173

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL------SIKAF 480
           +    ++F WI+DFP  EW+EEE +    H+PFT P+          L       SI+A 
Sbjct: 174 VPTGRWDFLWIVDFPLLEWDEEEGRYVALHHPFTSPKEEDLPKLDKALENPEVATSIRAR 233

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLV NG EI  G IR H  ++  + F+ +GISKE  E +FG L +A + G PPHGG+A
Sbjct: 234 AYDLVLNGEEIGGGSIRIHRPDIQEKLFNILGISKEEAEEKFGFLIQALKYGAPPHGGLA 293

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            G+DR+V L+  ++++REV  FP +Q     L  +P  VS EQL ELG+ +    ++
Sbjct: 294 FGLDRLVALMTDSESIREVIAFPKTQKGSCPLTDAPDYVSKEQLEELGIEVEIPQEE 350


>gi|299783164|gb|ADJ41162.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Lactobacillus fermentum CECT 5716]
          Length = 343

 Score =  347 bits (891), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 116/349 (33%), Positives = 176/349 (50%), Gaps = 9/349 (2%)

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E +++ V +E    + V   F R+ + +A+ +YG+DKPD R  +++ +V++    S F
Sbjct: 1   MAEGLIKRVMKEAVGVD-VPTPFPRMEWQEAMDKYGSDKPDTRFDMLIQDVSDLVKDSSF 59

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
           +VFS  ++         +P      +R    +  ++ +  G  GLA++            
Sbjct: 60  KVFSATVADGNFVRAIVVPGGADKYSRKDITKKEDYIKRYGAKGLAWVKVT-----EEGY 114

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
            GPVAK LN     A+  RL  + GD   F+AG     C      R  IA+EL +I+ N 
Sbjct: 115 NGPVAKFLNDD-ANALNERLSAKVGDLVLFVAGSFHVVCDSLGYLRESIAKELDLIDENK 173

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIKAFQYDLVCNGF 489
           F + W++++P +E++E   K   AH+PFTM             D     A  YD+V NG 
Sbjct: 174 FNYLWVINWPMFEYDEGFGKWIAAHHPFTMLNEDDLKYLEEGEDPHQAHAQSYDIVLNGN 233

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G IR H  EV  + F  +G +KE  + RFG L +A + GMPP GG+A G+DR VML
Sbjct: 234 EIGGGSIRIHDPEVQEKVFKALGYTKEAAQARFGFLIKALENGMPPEGGMAFGLDRWVML 293

Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
           L  A ++R+V  FP +    + L  +P TV  EQL  L L + E PK+ 
Sbjct: 294 LAHADSIRDVIAFPKNSKAVEPLTAAPGTVDDEQLZVLHLNVEEAPKEA 342


>gi|119500862|ref|XP_001267188.1| aspartyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
 gi|119415353|gb|EAW25291.1| aspartyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
          Length = 565

 Score =  347 bits (891), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 165/579 (28%), Positives = 264/579 (45%), Gaps = 45/579 (7%)

Query: 45  YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL 104
           Y I  V    +S   E  +S+ +   + + G+V  +  +  +        E+    I+ L
Sbjct: 3   YSIQLVSFIKNSPL-EKLRSINANSPVVVRGIVQPKKGKGSDTEQSDC-WEVHIADIDPL 60

Query: 105 SVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN---F 161
           +   +  +        PE     +R+L LR D+  ++ ++    + ++    + +    F
Sbjct: 61  NEFPKDIIMTAETAFAPE-----HRYLQLRSDSELRDALRFRAQVRNICREELEQCRPPF 115

Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           +E  TP+L  S+PEGAR+FLVP+R  +G  YALPQ+PQQYKQ+LMASG  RY+Q A CFR
Sbjct: 116 VEIETPLLFKSTPEGAREFLVPTR-RRGLAYALPQSPQQYKQILMASGIPRYYQFARCFR 174

Query: 222 DEDPRSDRLPGEFYQL----DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           DED R+DR P EF QL    D+EMSF   +D++ T+E ++R ++         S  F R+
Sbjct: 175 DEDLRADRQP-EFTQLLAQLDLEMSFATGEDVMRTVEGIIRRLWSFLMKDEAPSGPFRRM 233

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y DA+ RYG+DKPD R  + +  + ++ +  +  + +KI  +                 
Sbjct: 234 SYQDAMSRYGSDKPDTRFGMEIFKI-DYLLPVD--LVNKITPLTDPIIEAFKFEGNDNDP 290

Query: 338 RAFCDRMNEW------ARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL 391
            A  + +N++      A     P      +  D    + G+ P          E I   L
Sbjct: 291 VATYEFINQFLDSPAGAPFNNNPEGGPGVFVYDAKKPLCGLQP----FGFEAAERIEELL 346

Query: 392 DMQDGDSCFFIAGDPLKFCSFA---ADARNHI---AQELGIIN-CNCFEFCWIMDFPFYE 444
           D   GD     A +   F   +    D R  +   A   G       F+F W++DFP + 
Sbjct: 347 DPDHGDLIVIQARERAPFAGGSTPIGDLRRALHTAAVSSGFKPAPTGFDFLWVVDFPLFS 406

Query: 445 WNEEEK-------KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
            + + +        I   H+PFT P+          D     A  YDLV NG E+  G  
Sbjct: 407 PSSDSEPGQGGAAGISSTHHPFTAPKTAADVDQLLTDPTKAVADHYDLVVNGVELGGGSR 466

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H + V      ++   +      F  L  A + G PPH G+A G DR+V ++LG ++V
Sbjct: 467 RIHDAAVQEFILRDILQMRPERLADFSHLLDALRAGCPPHAGLALGFDRLVAVMLGKESV 526

Query: 557 REVSLFPMSQN-FCDLLMGSPSTVSVEQLRELGLRIVEN 594
           R+V  FP +     D ++ +PS ++ E L    LR+ + 
Sbjct: 527 RDVIAFPKTGKGGDDAMVKAPSMMTEEALETYHLRLKDE 565


>gi|154323340|ref|XP_001560984.1| hypothetical protein BC1G_00069 [Botryotinia fuckeliana B05.10]
 gi|150842298|gb|EDN17491.1| hypothetical protein BC1G_00069 [Botryotinia fuckeliana B05.10]
          Length = 736

 Score =  347 bits (890), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 180/656 (27%), Positives = 279/656 (42%), Gaps = 76/656 (11%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHY----GITQVVANPDSAC--- 58
           H    L   ++G  V ++G++H  +  G  +IF  I        GI  V+ +        
Sbjct: 83  HPWEQLHSLNIGKRVTVTGFLHNKKQLGKGLIFATISRGSSANSGIQVVLKDSPEEGKIR 142

Query: 59  --FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS--AQKIEILSVAEELPLPV 114
             F+  K +R    + + G++ SR  +      I     ++  A     L+ ++ L    
Sbjct: 143 DAFKSFKDIREHSAVSVTGILQSRVKKPDKTAEIAPDSPVTEGASDSTPLTRSQLLANFD 202

Query: 115 FGEREY------PESIR--------FKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAE 159
               +       P  I            R L++R    L++ ++ R+++   +R  + + 
Sbjct: 203 IHAEDVRAINSFPRDIIVGPAQKFGPDSRHLEVRFEPDLYERLMFRSKLAKLVRKYLYSV 262

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
           +F E  TPIL  S+PEGAR+FLVP+R   G  YALPQ+PQQYKQ+LMASG  +YFQ A C
Sbjct: 263 SFDEIETPILFKSTPEGAREFLVPTR-KPGYAYALPQSPQQYKQILMASGVTKYFQFAKC 321

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV--------FEEFSNGNTVS 271
           FRDED R+DR P EF Q+DMEMS+ +   ++ T+E +++           E   +     
Sbjct: 322 FRDEDLRADRQP-EFTQIDMEMSWADGQYVMQTVEELVKSTHRQIQSEQLEAVHSLELPK 380

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
            +F R+ Y++A+ ++G+DKPDLR   ++H V      +   + + I   NP  E      
Sbjct: 381 TDFPRMTYEEAMSKHGSDKPDLRILDLIHRVDSIIPENLKGMMTSI--ENPIIEACKFRL 438

Query: 332 KGGGGN-----RAFCDRMNEW---ARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVN 383
            G         R F D  +         G PG+     R    G  A     A+ L  + 
Sbjct: 439 NGNSRKVQQFIRKFMDSADAETFQKNPDGPPGIFVFDPRRPLEGLQAFGFEGAETLKQLY 498

Query: 384 TEAIRVRLDMQD------------GDSCFFIAGDPLK---FCSFAADARNHIAQ----EL 424
           +       D  D            GD     A          +     R  + +    E 
Sbjct: 499 SSLPSSSHDNNDPRGPDATSTFDEGDLLILQARPEAPHSGGSTTLGKLRLALYKAAISEQ 558

Query: 425 GIINCNCFEFCWIMDFPFYEWNEE---------EKKIDFAHNPFTMPQ-GGMESLKGNDL 474
            +     F + W+ DFP +  N                  H+PFT P+      L   D 
Sbjct: 559 LLAPTPGFRYLWVTDFPLFTLNTANPTDPGQGGTSGFSSTHHPFTAPKTADDIELLLTDP 618

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L++ A  YDLV NG E+  G  R H +E+      +V    +   + F  L+ A + G P
Sbjct: 619 LAVTADHYDLVLNGVELGGGSKRIHSAEIQKFIMKSVLKMSDERMSDFNHLFEALRAGCP 678

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           PH G A G DR V +L G ++VR+V  FP      D ++GSP  ++ EQ     L+
Sbjct: 679 PHAGFAIGFDRWVAVLTGRESVRDVIFFPKGNKGEDAMVGSPGLITSEQEETYNLK 734


>gi|169595894|ref|XP_001791371.1| hypothetical protein SNOG_00694 [Phaeosphaeria nodorum SN15]
 gi|160701182|gb|EAT92189.2| hypothetical protein SNOG_00694 [Phaeosphaeria nodorum SN15]
          Length = 501

 Score =  347 bits (889), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 161/517 (31%), Positives = 239/517 (46%), Gaps = 53/517 (10%)

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMR 153
           E+    +E L+   E  +        PE      R L LR +  L  N++ R + +   R
Sbjct: 20  EIVVDHVEPLNQISEDFIIKQDTVFGPE-----QRHLQLRTNSQLRNNLLFRAQKVLEAR 74

Query: 154 CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
             +    + E  TPIL  S+PEGAR+FLVP+R  +G  YALPQ+PQQYKQ+LMASG  +Y
Sbjct: 75  VHLNEHEWTEIETPILFKSTPEGAREFLVPTR-EKGLAYALPQSPQQYKQILMASGLTKY 133

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           FQ A CFRDED R+DR P EF QLDMEM+F  ++D++   E +L+ ++++    N     
Sbjct: 134 FQFARCFRDEDLRADRQP-EFTQLDMEMAFAGEEDVMAQTERLLQSIWKK----NDKGER 188

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           F R+ Y +A+  YG+DKPDLR    + +            F   +S +P      + +  
Sbjct: 189 FPRMKYQEAMSSYGSDKPDLRYEAKVID-----------AFKIPMSGDPKTTRKFVASFL 237

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
                   D         GQPG+    +  D S  + G+GP+     +     + V    
Sbjct: 238 DSP-----DGKVYLDNPHGQPGI----FIGDLSQPMQGLGPLGYPYVMEGPPGLAV---- 284

Query: 394 QDGDSCFFIAGDPLKFC---SFAADARNHIAQE---LGIINC---NCFEFCWIMDFPFYE 444
           + GD     A          +   + R  + +      +I+    + ++F WI DFP + 
Sbjct: 285 EHGDLLVLQARPNAPLSGGSTMLGNLRLALYKAAIAQDLIDPPSPDDYQFLWITDFPLFT 344

Query: 445 WNEEEK-------KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
            N +              H+PFT P+      L   D     A  YD+V NG E+  G  
Sbjct: 345 PNNDSDPGQGGSSGFSSTHHPFTAPKTPADVDLLLTDPSRAIAAHYDIVVNGVELGGGSR 404

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H + V    F +    K      F  L      G PPH GIA G DR++ ++ G+++V
Sbjct: 405 RIHNAAVQEFIFRDALKMKPERIEDFRHLLNVLASGCPPHAGIALGWDRLIAVMRGSESV 464

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           R+V  FP S    D L+ SP+ V+ EQL    L++ E
Sbjct: 465 RDVIAFPKSGRGEDGLVKSPNRVTEEQLDTYHLKLKE 501


>gi|310795348|gb|EFQ30809.1| tRNA synthetase class II [Glomerella graminicola M1.001]
          Length = 636

 Score =  346 bits (887), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 178/648 (27%), Positives = 268/648 (41%), Gaps = 86/648 (13%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           ++ GS + +SG + R R  G  + F  +    G              +   +R    +  
Sbjct: 8   TNPGSEIVVSGHIGRTRKVGKNLAFAHLE-RNGERIGQICAKGENAAVLAKIRPFSAVLA 66

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V   S           + E+  + I+ L+     P P             + R L L
Sbjct: 67  KGVVTEASGAA--------RFEMDMESIQYLN-----PFPKDIIIGPDTVFPPEQRHLQL 113

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           R  + L + +  R ++ ++M   M+   F++  TPIL  S+ EGAR+F+VP+R  + + Y
Sbjct: 114 RFHEQLRERLRFRAQLKSTMGQAMVDREFMDVETPILFKSTSEGAREFIVPTRRPRYA-Y 172

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           ALPQ+PQQYKQ+LMASG   Y+Q A CFRDED R+DR P EF QLDME SF     I+  
Sbjct: 173 ALPQSPQQYKQVLMASGMGGYYQFARCFRDEDHRADRQP-EFTQLDMEKSFATGVTIMED 231

Query: 253 MENVLRGVFEEFSNGNTVS----------------------------------------- 271
           +E V+   ++       +                                          
Sbjct: 232 VEYVVGRAWDTLREIYVMEVGKDSFAPVRKASLQNWEQSIQDSAKDDAKAPIYQEYPAIS 291

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
             FLR+ Y D +  YG+DKPDLR P  +  V EH   +   + + + S  P  EVW I  
Sbjct: 292 TPFLRMKYTDCMDLYGSDKPDLRIPNRICRVDEHLNKNFVSMITDLES--PIVEVWKISP 349

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGL---------AYIFWRLDESGNVAGMGPVAKHLNIV 382
                 R     + ++  S    GL         A +F         + +GP      + 
Sbjct: 350 HEDVDRRDVWKFVIDFMESL-PKGLSQNPDGAPTALVFDSSKPLNGFSALGPEGLDSILG 408

Query: 383 NTEAIRVRLDMQDGDSCFFIAGDPLKFC---SFAADARNHI---AQELGIINCNC-FEFC 435
                    ++ +GD   F A          +   + R  +   A E G+++ +  F+F 
Sbjct: 409 ALPEDSGFSELNNGDIILFQARKDQPQQGGSTKLGETRIALYHAAVEAGLLDRDDSFKFL 468

Query: 436 WIMDFPFYEWNEEEK-------KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCN 487
           W+ DFP +   EE              H+PFT P       L   D L  KA  YDLV N
Sbjct: 469 WVTDFPMFTPEEEGDVGQGGASGFSATHHPFTAPHSEEDFELLFKDPLRAKADHYDLVLN 528

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G E+  G  R H++E+    F ++    +     F  L +A + G PPH G A G DR V
Sbjct: 529 GVELGGGSRRIHIAEIQEFIFRDILKMSQDKIKEFSHLLKALRAGCPPHAGFAIGFDRFV 588

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            +L G+ +VR+V  FP + N  D   G P  ++ EQL    L+  +  
Sbjct: 589 AVLSGSSSVRDVIAFPKNNNGVDEFAGGPGKMTKEQLETYNLQFRKKE 636


>gi|255030116|ref|ZP_05302067.1| aspartyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 321

 Score =  345 bits (885), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 106/322 (32%), Positives = 165/322 (51%), Gaps = 5/322 (1%)

Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
           Y +A+ R+G+DKPD+R  + + NV++     +F+VF   +      +     A     +R
Sbjct: 1   YKEAMDRFGSDKPDIRFGLELQNVSDVVKDVDFKVFQSAIENGGEVKAINAKAAAANFSR 60

Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398
              D +  +  + G  GLA++     E+G +   GP+AK         ++V L  +DGD 
Sbjct: 61  KDLDALGVFVANYGAKGLAWLKV---EAGELK--GPIAKFFPEDKAAELKVALQAEDGDL 115

Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
             F A       +     RN + ++L +IN     F W+ D+P +E++EE ++   AH+P
Sbjct: 116 LLFAADKADIVAASLGALRNKLGKDLNLINEEELAFLWVTDWPLFEYDEEAERYVSAHHP 175

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           FT+P+     L   D   + A  YD+V NG+EI  G +R +  EV    F  +G + E  
Sbjct: 176 FTLPKEEDIPLLETDSSKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESA 235

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
           + +FG L  A + G PPHGGIA G+DRIVM+L G  N+R+   FP + +  D L  +P  
Sbjct: 236 KEQFGFLMDALEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGE 295

Query: 579 VSVEQLRELGLRIVENPKKILK 600
           VS  QL EL L  V+   K+ K
Sbjct: 296 VSEAQLAELKLETVKKENKLKK 317


>gi|315282430|ref|ZP_07870847.1| aspartyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613935|gb|EFR87662.1| aspartyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 331

 Score =  345 bits (884), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 107/331 (32%), Positives = 166/331 (50%), Gaps = 5/331 (1%)

Query: 265 SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
           +   T+   F R+ Y +A+ R+G+DKPD+R  + + NV+E     +F+VF   +      
Sbjct: 4   AKNITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQNVSEVVKDVDFKVFQSAIENGGEV 63

Query: 325 EVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
           +     A     +R   D +  +  + G  GLA++     E+G +   GP+AK       
Sbjct: 64  KAINAKAAAANFSRKDLDALGVFVANYGAKGLAWLKV---EAGELK--GPIAKFFPEDKA 118

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYE 444
             ++  L  +DGD   F A       +     RN + ++L +IN     F W+ D+P +E
Sbjct: 119 AELQAALQAEDGDLLLFAADKADIVAASLGALRNKLGKDLNLINEEELAFLWVTDWPLFE 178

Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
           ++EE  +   AH+PFT+P+     L   D   + A  YD+V NG+EI  G +R +  EV 
Sbjct: 179 YDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAEAYDIVLNGYEIGGGSLRIYKKEVQ 238

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              F  +G + E  + +FG L  A + G PPHGGIA G+DRIVM+L G  N+R+   FP 
Sbjct: 239 ESMFRALGFTDESAKEQFGFLMEALEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFPK 298

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           + +  D L  +P  VS  QL EL L  V+  
Sbjct: 299 TGSAVDPLTNAPGEVSAAQLAELKLETVKKE 329


>gi|68488367|ref|XP_711972.1| hypothetical protein CaO19.4478 [Candida albicans SC5314]
 gi|68488418|ref|XP_711947.1| hypothetical protein CaO19.11958 [Candida albicans SC5314]
 gi|46433295|gb|EAK92741.1| hypothetical protein CaO19.11958 [Candida albicans SC5314]
 gi|46433323|gb|EAK92768.1| hypothetical protein CaO19.4478 [Candida albicans SC5314]
          Length = 698

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 182/663 (27%), Positives = 294/663 (44%), Gaps = 96/663 (14%)

Query: 6   THSCGDLGVSDVGS-------FVRLSGWVHRV-RPHGGIIFLDIRDHYGI-TQVVANP-- 54
           TH+   +  S++          V L+G VHR  R    + F  +RD  G   Q++A P  
Sbjct: 49  THTIKSID-SNIEKYLNKQQIKVTLNGHVHRKSRIRPTLGFAFLRDTNGDEIQLLATPKY 107

Query: 55  -DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL 112
            + + FE+ K +  E  + + G +  + ++    +    Q EL  +  +IL+ +  +   
Sbjct: 108 TEPSIFELMKKLTIEDSVSVSGFIQPKESK----SGKEQQWELVVENFQILNSSNLDAAQ 163

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI-AENFIECSTPILTA 171
               +   P  I  ++R+L LR     K++  R+     +R   I    F+E  TP+L  
Sbjct: 164 LDKLKHNNPRDIPPQFRYLQLRTPYYQKSLRLRSEAARLIRDIFIKNHKFVEIETPLLFK 223

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           S+PEGAR+FLVP+R     FYALPQ+PQQYKQ+LM+SGF RYFQ+A CFRDED RSDR P
Sbjct: 224 STPEGAREFLVPTRSF-NKFYALPQSPQQYKQILMSSGFTRYFQVAKCFRDEDLRSDRQP 282

Query: 232 GEFYQLDMEMSFVEQDDILNTM-ENVLRGVFEEFSNGNTV------------------SN 272
            EF Q+D+EMSFV   D +  + E+V+  V+ +     T                   S 
Sbjct: 283 -EFTQIDLEMSFVNNSDQVGIVVEDVIHNVWNKVGGKLTYKVNDEGFLVEADLAEVGKSL 341

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            F ++ Y D + +YG DKPDLR+ +   ++ + F+  E   F  ++ V      +   + 
Sbjct: 342 QFSKLNYIDVLVKYGIDKPDLRSNLSFISLEDFFIAKENADFP-VVEVCVLKGAFDASSG 400

Query: 333 GGGGNRAFCDRMNE-------WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE 385
                ++F +  N        WA  +      Y    +D +        +    N  +  
Sbjct: 401 KYKLPKSFINDHNFSSRRPYVWAIQRNDDTFGYFKKLIDAN--------IIATTNTFDES 452

Query: 386 AIRVRLDMQDGDSCFFIAGDPLKFCSF--AADARNHIAQELGI--------------INC 429
            ++  L++Q GD           + S       R    +E                 ++ 
Sbjct: 453 KLQELLNLQPGDILAVSTRAKFPYESPTPLGKFRQLAIEEFPHKWQRPIVMENGQLSVDY 512

Query: 430 NCFEFC---WIMDFPFYEWNEEE--------------------KKIDFAHNPFTMPQGGM 466
           +  +     W+++FP +   EE                     KK +  H+PFTM +   
Sbjct: 513 DRNDIVVGSWVVNFPLFNPVEESGQTSHVTEESSKPKYPVYNFKKFESTHHPFTMAKIED 572

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
             L  +D L ++   YDLV NG E+  G  R H   +    F  + +     +  FG L 
Sbjct: 573 YDLLESDPLKVRGEHYDLVINGVEVGGGSRRIHDPALQQYIFEEI-LQISNFQQLFGHLL 631

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           +A   G PPH G+A G DR+  +L+G+ ++R+V  FP +Q+  D ++ SP+ V    L E
Sbjct: 632 KALSMGCPPHAGLALGFDRLCAMLMGSTSIRDVIAFPKNQSGVDPVVESPTGVKEATLNE 691

Query: 587 LGL 589
             +
Sbjct: 692 YFI 694


>gi|227555482|ref|ZP_03985529.1| possible aspartyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|227175378|gb|EEI56350.1| possible aspartyl-tRNA synthetase [Enterococcus faecalis HH22]
          Length = 303

 Score =  343 bits (879), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 99/304 (32%), Positives = 152/304 (50%), Gaps = 6/304 (1%)

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           DKPD R  + + +V E     +F+VF   L      +           +R   D + ++ 
Sbjct: 2   DKPDTRFAMELIDVAEVVKDVDFKVFQAALENGGHVKALNAKGAADKYSRKDMDNLGKYV 61

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
              G  GLA++    D        GP+AK L    ++ +    + + GD   F A  P  
Sbjct: 62  SQFGAKGLAWLKVEED-----GLKGPIAKFLT-EVSDELIAATNAEVGDILMFGADKPEI 115

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
             +     R  + +ELG+I+ + F F WI+D+P +E++EE  +   AH+PFT P+     
Sbjct: 116 VAAALGAVRTRLGKELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVD 175

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
               D  S+ A  YD+V NG+E+  G +R H  E+  + F  +G +KE  +++FG L  A
Sbjct: 176 RLATDPASVYAEAYDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDA 235

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
              G PPHGGIA G+DR+ MLL G +N+REV  FP +    D +  +PS VS  QL EL 
Sbjct: 236 LDYGFPPHGGIALGLDRLAMLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELN 295

Query: 589 LRIV 592
           + + 
Sbjct: 296 IDVT 299


>gi|330975331|gb|EGH75397.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 306

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 101/306 (33%), Positives = 152/306 (49%), Gaps = 3/306 (0%)

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
           PDLRNP+ + +V +     EF+VFS   +   G              R+  D   ++   
Sbjct: 2   PDLRNPLELVDVADQLTGVEFKVFSGPANDPKGRVAALRVPGAASMARSQIDDYTKFVSI 61

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
            G  GLAYI       G      P+ K +   N   I  R+   DGD  FF A +     
Sbjct: 62  YGAKGLAYIKVNERAKGPEGLQSPIVKFIPEDNLNVILDRVGAVDGDIVFFGADNFKIVS 121

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                 R  I  +L +  C  +   W++DFP +E N++       H+PFT P+   E L+
Sbjct: 122 EALGALRIKIGNDLKLHTCE-WAPMWVVDFPMFEENDD-GSFTALHHPFTAPKCTPEELE 179

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            N   +  +  YD+V NG E+  G IR H  E+    F  +GI+++  + +FG L  A +
Sbjct: 180 AN-PATALSRAYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALK 238

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
            G PPHGG+A G+DR+VML+ GA+++REV  FP +Q+  D++  +P  V  + LREL +R
Sbjct: 239 YGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIR 298

Query: 591 IVENPK 596
           + E PK
Sbjct: 299 LREQPK 304


>gi|256086206|ref|XP_002579294.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238664719|emb|CAZ35533.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 508

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 159/596 (26%), Positives = 240/596 (40%), Gaps = 112/596 (18%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           D     + S V + GW+   R      FL +RD  G+ Q+  + +S          SE V
Sbjct: 14  DARDKHINSTVTVCGWLEFCRLSSR--FLVLRDDRGLIQIYCDKNSL---KIPQFNSESV 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G V +R  + +N  + TG+       IEI++ + E+                    
Sbjct: 69  LRVTGKVQARPEKDVNKRMPTGE-------IEIVAESIEILSHSS--------------- 106

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
                                                 L   +  GAR+F+VP++   G 
Sbjct: 107 ----------------------------------PLSFLPKDAANGAREFVVPTKF-PGL 131

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +Y LPQ+PQQ+KQLLM SGF +Y Q+A CFRDE  RSDR P EF QLD+EM+F+   DI 
Sbjct: 132 WYCLPQSPQQFKQLLMISGFSKYMQVARCFRDETSRSDRQP-EFTQLDIEMAFITPYDIY 190

Query: 251 NTMENVLRGVFEEF---SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
             +EN+L  ++           +S  FLR+ Y DA+ RYG+DKPD+R   +         
Sbjct: 191 EIIENMLLYIWPTVQSTLGCQPISTPFLRMQYCDAMSRYGSDKPDVRFGFLF-------- 242

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESG 367
                      +V+               +      + +         ++    +  +S 
Sbjct: 243 --------SYSAVDGHTGFNIPRKYSSNLSAEDLGSLEDLVFRLTGQRISIFTVQNIKSN 294

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
            +                 +   L  + GD   FI G+          AR  +A+   +I
Sbjct: 295 QL----------------DLLNLLKPECGDLVVFIKGNTEIELKALGMARVEVAK---LI 335

Query: 428 N-------CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           +          F F WI  FP +E N    +    H+PFT            D   +   
Sbjct: 336 DSKGLSIYEPEFHFLWINQFPLFEKNNL-GQWKSVHHPFTAASPETAHFLYTDPSKVIGL 394

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDLVCNG E+  G IR H  EV    F+ +          F     A   G PPHGGIA
Sbjct: 395 HYDLVCNGQEVGGGSIRVHNPEVQKYIFTEILKENSCEMEYF---LTALNSGAPPHGGIA 451

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
            G+DR++ + + AK++R+V  FP + +  DLL G+P+ V  E L +  + +  + K
Sbjct: 452 LGLDRLIAIFVNAKSIRDVIAFPKAADGKDLLCGTPTMVDDEILSQYCISVSNHSK 507


>gi|290559874|gb|EFD93197.1| tRNA synthetase class II (D K and N) [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 457

 Score =  340 bits (871), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 156/462 (33%), Positives = 250/462 (54%), Gaps = 15/462 (3%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
            CG +   D+   V L+GW   +R HGG IF+D+ D  G+ Q+V   +    + AK +  
Sbjct: 4   YCGKICQDDLDKEVTLNGWCRYIRDHGGKIFVDLADRTGMCQLVF--EGHLADNAKELGR 61

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY---PESI 124
           E+VL I G V  R  ET++ +  TG++E+  + ++I+S +E  P  +  E++     E I
Sbjct: 62  EYVLNISGTVRLRDKETVDEDNPTGRLEVLVKSLDIISKSETPPFEITDEKKKFLASEDI 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-GARDFLVP 183
           R KYR+LDLRR  +  NI  R ++    R      +F+E  TP L   + E GAR F+VP
Sbjct: 122 RLKYRYLDLRRKEMIDNIEFRDKVTKRARRFFWDNDFLELETPTLVKDTYETGARPFIVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR  +G F++LPQ+PQ YKQL M SG  +YFQ+A  FRDED R DR P EF QLD E+SF
Sbjct: 182 SRTKKGMFFSLPQSPQIYKQLAMMSGLGKYFQVARAFRDEDQREDRQP-EFTQLDFEVSF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            ++  I++ +E++++ +F +      +   F ++ Y +A+ +YG+DKPD+R    + ++T
Sbjct: 241 KDESYIMSLVEDLIKSIFNDVIG-EKLKVPFKKMDYYEAMSKYGSDKPDIRYDYPIIDIT 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPA--KGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +    S++ + ++++      +     A    G  N+ F   + E A+S G  GL ++F 
Sbjct: 300 DEIKDSDYNIINRVIQAGGSVKAVCFSAEYPNGKVNKDFMLSIIEIAKSNGLKGLTWLFV 359

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI 420
           R  +    +    +A+ ++    E I  +L  Q+GD   F A  D          AR  I
Sbjct: 360 R--DGKLNSIPESIAEAMSKSE-EKILNKLKAQEGDIIIFGADMDEDLLLQAIGKARKII 416

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
             ++G      F F W++DFP +E ++   K+  +HNPFT P
Sbjct: 417 GDKIGKFTE-QFSFLWVIDFPLFELDKITGKLKPSHNPFTAP 457


>gi|266625685|ref|ZP_06118620.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288862408|gb|EFC94706.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 307

 Score =  339 bits (869), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 95/311 (30%), Positives = 159/311 (51%), Gaps = 5/311 (1%)

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
           +G+DKPDLR  + + NV++     EF VF   L             +G    R   D + 
Sbjct: 2   FGSDKPDLRFGMELKNVSDVVRGCEFAVFKNALEAGGSVRGINADGQG-AMPRKKIDALV 60

Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD 405
           E+A+  G  GLAYI    D           AK +      A+   +  + GD   F A  
Sbjct: 61  EYAKGFGAKGLAYIAIAEDG----TYKSSFAKFMTEDELHALVEAMAGKPGDLLLFAADK 116

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
                    + R  +A++  ++  + F+F W+ +FP  E++EE+ +    H+PFTMP   
Sbjct: 117 DKVVFDVLGNLRLELARQQDLLKKDDFKFLWVTEFPLLEYSEEQGRFVAMHHPFTMPMDE 176

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
              L  +D  +++A  YD+V NG E+  G +R H  ++  + F  +G + E  + +FG L
Sbjct: 177 DWHLIDSDPGAVRAKAYDIVLNGTEMGGGSVRIHQGDIQSKMFEVLGFTPEQAQEQFGFL 236

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             AF+ G+PPH G+A G+DR++ML++GA ++R+V  FP  ++  D++  +P+ V  +QL 
Sbjct: 237 LDAFKYGVPPHAGLAYGLDRMIMLMVGADSIRDVIAFPKVKDASDMMTEAPAPVDEKQLE 296

Query: 586 ELGLRIVENPK 596
           ELG+ + E  +
Sbjct: 297 ELGIEVSETEE 307


>gi|28385930|gb|AAH46429.1| Dars2 protein [Mus musculus]
          Length = 413

 Score =  336 bits (861), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 130/412 (31%), Positives = 201/412 (48%), Gaps = 17/412 (4%)

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+EMSFVEQ  I   +E +L+  
Sbjct: 5   FKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIEMSFVEQTGIQRLVEGLLQYS 63

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
           +    + + +   F  + + +A+  YGTDKPD R  + + +V++ F ++E R     L+ 
Sbjct: 64  W--PGDKDPLVTPFPSMTFAEALATYGTDKPDTRFGMKIVDVSDVFRNTELRFLQDALAK 121

Query: 321 NPGYEVWAIPAKGGGGNRAF-CDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
             G         G    R    + + ++A       +  IF    ++       P AK +
Sbjct: 122 PQGTVKAIRVHDGAKYLRKEDIEFIRKFAVHHFSQEVLPIFLNAKKN----WSSPFAKFI 177

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-----IINCNCFEF 434
                  +   L++Q+ D     AG+  K CS     R   A  L      + +   F F
Sbjct: 178 MEEERLELARSLEIQEEDIVLLTAGEHEKACSLLGKLRLECADLLEMRGAVLRDPAVFSF 237

Query: 435 CWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
            W++DFP +   EE   +++ AH+PFT P      L   +   ++   YDLV NG EI  
Sbjct: 238 LWVVDFPLFLAKEESPTELESAHHPFTAPNSSDIHLLYTEPEKVRGQHYDLVLNGNEIGG 297

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G +R H +   LQ +    + KE V+     L +A   G PPHGGIA G+DR+V L+ GA
Sbjct: 298 GSVRIHDA--QLQRYILETLLKEDVK-LLSHLLQALDYGAPPHGGIALGLDRLVCLVTGA 354

Query: 554 KNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISVTT 605
            ++R+V  FP S    DL+  +P +VS E+L+   + ++       + +  T
Sbjct: 355 PSIRDVIAFPKSYRGQDLMSNAPDSVSPEELKPYHIHVLWPADSEEESASAT 406


>gi|289674666|ref|ZP_06495556.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 330

 Score =  335 bits (860), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 152/332 (45%), Positives = 218/332 (65%), Gaps = 5/332 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDLRNP+ + +V 
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDLRNPLELVDVA 299

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
           +     EF+VFS   + +P   V A+   G  
Sbjct: 300 DQLTGVEFKVFSGP-ANDPKGRVAALRVPGAA 330


>gi|307069545|ref|YP_003878022.1| putative aspartyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
 gi|306482805|gb|ADM89676.1| putative aspartyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
          Length = 567

 Score =  334 bits (856), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 166/582 (28%), Positives = 275/582 (47%), Gaps = 26/582 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R   CG +    +     L GW++ +R HG IIF D+RD  GI Q++       F     
Sbjct: 4   RNKFCGIINKKFINKIKYLYGWINNIRKHGNIIFFDLRDRSGIIQIIIKKKIKYFYKIIK 63

Query: 65  VR-SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
              +E+ + I G++ +R  + IN  I TG+IE+    I+IL+  ++  +    +    ++
Sbjct: 64  KIKNEYCIEILGIIFNRINKNINYKIFTGEIEIYILNIKILNKCKKKIINFNKKNNNEKN 123

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
                R   LR++ ++ N   + +IIN +R  +   NFIE  TPIL+  +  G+++FL  
Sbjct: 124 KLK-NRIFYLRKNKIYNNFYIKNKIINIIRNFLNKNNFIEVETPILSKITLGGSKEFLTF 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           S+ N+  F+AL Q+PQ +KQLLM S FDRY+QIA CFR+E+ R DR P EF Q+D EMSF
Sbjct: 183 SKNNKNKFFALAQSPQIFKQLLMISNFDRYYQIAKCFRNENLRKDRQP-EFTQIDCEMSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + +I+      L     +          F  + +  +I+ YGTDKPDLR  + +    
Sbjct: 242 MNKKEII-FFFEKLIKKIFKKILNINFIKPFKILKFKKSIKYYGTDKPDLRINLKL---- 296

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
                     F  I  +N  Y       K   G+R     +N +     +  + ++    
Sbjct: 297 --------LCFKNIFFINNKYIKKIFFIKILNGSRMKIKDINYYINYINKFNIYFLIIIK 348

Query: 364 DESGNVAGMG--PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            +   +       + K++N      +  + +++  D       +  K   F       I 
Sbjct: 349 IKKYFIFKKYFLKINKYINEEFFFKLLKKNNVKINDIILIFITNKKKIYKFINKLILKIG 408

Query: 422 ----QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
                +   I  N     WI++FP ++ N     I   H+ FT      +     ++  I
Sbjct: 409 YSNFSKKNKIFINKIIPLWIINFPLFKKN--NNNIKSYHHIFTS--PLKKKFNKKNIFKI 464

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YDLV NG EI  G IR +  ++  + F  + I+K+ ++++F     + +   PPHG
Sbjct: 465 FSKSYDLVINGVEIGGGSIRIYKHKLQNKIFKILNINKKSIKSKFNFFLNSLKLSTPPHG 524

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
           GIA GIDR++ ++L  K++REV  FP +Q F  LL   P+ +
Sbjct: 525 GIAFGIDRLLYIILNLKSIREVIAFPKTQKFKCLLTKCPNYI 566


>gi|224539962|ref|ZP_03680501.1| hypothetical protein BACCELL_04874 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518416|gb|EEF87521.1| hypothetical protein BACCELL_04874 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 329

 Score =  332 bits (852), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 98/339 (28%), Positives = 164/339 (48%), Gaps = 13/339 (3%)

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           +F+E      +   F R+ + DA++ YG+DKPDLR  +    + +     +F VF     
Sbjct: 1   MFKEIRGVE-LEGQFQRMAWADAMKYYGSDKPDLRFGMKFVELMDILKGHDFSVFDSAEY 59

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWAR--SQGQPGLAYIFWRLDESGNVAGMGPVAK 377
           +                 R   D + E+ +    G  G+ Y   R++E GNV     V K
Sbjct: 60  IGG-----ICAEGAAHYTRKQLDALTEFVKRPQIGAKGMVYA--RVEEDGNVK--SSVDK 110

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADARNHIAQELGIINCNCFEFCW 436
                  + ++     + GD    ++GD  +K      + R  +  +LG+ + N F   W
Sbjct: 111 FYTQEVLQQVKEAFGAKPGDLILILSGDDTMKTRKQLCELRLEMGSQLGLRDKNTFACLW 170

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           ++DFP +EW+E+E ++   H+PFT P+     L   D  +++A  YD+V NG E+  G I
Sbjct: 171 VVDFPMFEWSEQENRLMAMHHPFTHPKDEDIDLLDTDPAAVRADAYDMVINGVEVGGGSI 230

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  ++  + F  +G + E  E +FG L  AF+ G PPHGG+A G+DR V L  G  ++
Sbjct: 231 RIHDPKLQAKMFEILGFTPEKAEEQFGFLMNAFKYGAPPHGGLAYGLDRWVSLFAGLDSI 290

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           R+   FP + +  D+++ +P+ +   QL EL L +    
Sbjct: 291 RDCIAFPKNNSGRDVMLDAPAALDPSQLDELNLIVDIKE 329


>gi|320588341|gb|EFX00810.1| aspartyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 684

 Score =  332 bits (851), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 173/656 (26%), Positives = 265/656 (40%), Gaps = 87/656 (13%)

Query: 16  DVGSFVRLSGWVHRVRP-HGGIIFLDIRD---------HYGITQVVANPDSACFEIAKSV 65
           +VG  V + G++ R R       F+D+           H        +         ++V
Sbjct: 43  EVGRTVTVHGFLGRRRDISARASFVDVVRPGEPQPIQLHSTWEAEGNSGAETTHAQLRAV 102

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                +   G V+S       A      + +    I++LS      +   G         
Sbjct: 103 PPYSAVWATGTVVSVPDSQGKAGEK---VLVRLAAIQVLSRFPRDIVVSKGAV-----FP 154

Query: 126 FKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              R L +R    L + +  R+ + + +R  +    F E  TP+L  S+PEGAR+F+VP+
Sbjct: 155 ATARHLQMRFSAALQRRLAFRSDVADRLRQLLTGAGFREFETPLLFKSTPEGAREFVVPT 214

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFD-RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           R  +G  YALPQ+PQQ+KQ+LMASG    YFQ A CFRDED R+DR P EF QLD+EM+F
Sbjct: 215 R-RRGWAYALPQSPQQFKQMLMASGVAASYFQFARCFRDEDLRADRQP-EFTQLDLEMAF 272

Query: 244 VEQDDILNTMENVLRGVF----------------------------------EEFSNGNT 269
              + ++ T+E ++R ++                                  +       
Sbjct: 273 ATGEHVMQTVEQLVRDLYCHIQQTYVLAPAGIGSADESGLVPTPHSEAPTSGDAVPYATL 332

Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
               F RI Y +A+ +YG+DKPDLR P  +H + +HF+   F      L+      V   
Sbjct: 333 PDEPFRRISYYEAMAKYGSDKPDLRIPGEIHQI-DHFLPKTFTSMISDLADPVVEAVRLR 391

Query: 330 PAKGGGGNRAFCDRMNEWA------RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVN 383
                  NR F  R+ +           GQP +       D S  ++G+  +    +   
Sbjct: 392 LDGSPRANRDFVRRLFDSLPPTLGQNPDGQPAV----LLFDASQPLSGLAALG---HEAA 444

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFC---SFAADARNHIAQEL---GIINCN-CFEFCW 436
                    ++DGD     A     F    +     R    +     G++  +  F F W
Sbjct: 445 ATLGVELGGLEDGDVVLLQARRREPFSGGSTALGQLRLEAWRAAVAGGLLEPDHRFCFAW 504

Query: 437 IMDFPFYEWNEEEK---------KIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQYDLVC 486
           ++ FP +  + +                H+PFT P       L   D L  +A  YDLV 
Sbjct: 505 VVGFPMFTRDVDTASEPGQGGHAGFSATHHPFTAPLTTADLDLLATDPLRARADHYDLVV 564

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           NG E+  G  R H++ V      +V    +    +F  L  A + G PPH G+A G DR+
Sbjct: 565 NGVELGGGSRRIHVAAVQELVLRHVLQMDDAGVAQFAHLLAALRAGCPPHAGMALGFDRL 624

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           V LL G  +VR+V  FP S    DL + SP+ ++  QL    L +     K     
Sbjct: 625 VALLAGTPSVRDVIAFPKSMKGEDLAVRSPTRLTAAQLETYHLAVRPAADKGKDAE 680


>gi|168070936|ref|XP_001786991.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162659993|gb|EDQ48195.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 272

 Score =  330 bits (846), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 89/274 (32%), Positives = 142/274 (51%), Gaps = 5/274 (1%)

Query: 319 SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKH 378
                 +   +   G   +R   D + E+ +  G  GLA++    D        GP++K 
Sbjct: 1   ETGGQVKAINVKNAGSKYSRKDIDALTEFVKVYGAKGLAWLKAEED-----GLKGPISKF 55

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
           ++    + +   L ++ GD   F+A             R  +A+EL +I+ + F F W+ 
Sbjct: 56  ISEAEQKGLEQALAIEAGDLLLFVADKKNVVADALGALRLKLAKELDLIDQSKFNFLWVT 115

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D+P +E++EEE +   AH+PFTMPQ     L   +  ++KA  YD+V NG+E+  G +R 
Sbjct: 116 DWPLFEYDEEEGRFYAAHHPFTMPQRADLELLDTNPKAVKAQAYDIVLNGYELGGGSLRI 175

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              E+  + FS +G +KE    +FG L  AF+ G PPHGGIA G+DR++MLL G  N+R+
Sbjct: 176 FEKEIQEKMFSLLGFTKEEAYAQFGFLLEAFEYGTPPHGGIAIGLDRLIMLLSGRTNLRD 235

Query: 559 VSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
              FP + +   L+  +PS VS  QL +L L + 
Sbjct: 236 TIAFPKTASASCLMTNAPSEVSENQLTDLHLALK 269


>gi|325989663|ref|YP_004249362.1| aspartyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574748|emb|CBZ40404.1| Aspartyl-tRNA synthetase [Mycoplasma suis]
          Length = 543

 Score =  330 bits (846), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 169/560 (30%), Positives = 262/560 (46%), Gaps = 40/560 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              V + G++  VR    I+FL IRD  G  QVV        +  +    E  + I+G  
Sbjct: 19  NQKVVIGGFIETVRKLKDIVFLVIRDGSGKIQVVFPK-----KEVELPPRESTVLIEG-- 71

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES-IRFKYRFLDLRRD 136
              +++  N+     ++E+  +++E+ S ++        E +  E   R KYR+LDLRR 
Sbjct: 72  --TTSQKKNSE----ELEILGERMEVFSTSKPSFPIDLNEEKMSEEKYRMKYRYLDLRRS 125

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           +LHKNI   ++        + + NF E +TPIL+  S EGA  F     VN    + L Q
Sbjct: 126 SLHKNIEFCSKAKFIASSYLHSLNFREITTPILSFPSREGAETFKTEENVNVNRSFTLAQ 185

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ YKQLLM +GF++YFQ A  FR E  R DR   EF QLD+EMSF  Q+ +   +E +
Sbjct: 186 SPQIYKQLLMIAGFEKYFQFATSFRAEKMREDRQ-YEFSQLDIEMSFSTQEKLFAIIEKL 244

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           L  + ++    +     F RI + +A  +YGTDKPDLR    + ++   F   +      
Sbjct: 245 LISLIKKLVKSDFPDLPFRRISFQEAFEKYGTDKPDLRFSPYIVDLFSSFDKKQVLPTQY 304

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
            LS+    +   I        R F     ++ +      +   +    +   ++    + 
Sbjct: 305 CLSLLVERKTINIEELYSEVGRDF-----KYIKKSHSKIIEGQY----DDWMISFSEKLN 355

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN-CNCFEFC 435
            H        I               +GD  +        R  I +++      N F   
Sbjct: 356 NHSEEFYLFYI------------CCNSGDKRESLLRMGRIRTAIIKQIKNREWENNFSLV 403

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           WI D+P++E +  E K+  +H+PFT+     +SL  ++LL  K+  YDLV NG EIASGG
Sbjct: 404 WITDWPYFEES-LEGKLVTSHHPFTL--PTKDSLSKDNLLDWKSHGYDLVLNGVEIASGG 460

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            R + S++  + FS +G S E +   FG    A   G+PPH GIA G DR++  LL  K+
Sbjct: 461 QRIYNSDLQAKIFSILGYSSEEINQEFGWFLEALNYGVPPHLGIAIGWDRLMSELLNLKS 520

Query: 556 VREVSLFPMSQNFCDLLMGS 575
           +REV  FP + +    +  S
Sbjct: 521 IREVIAFPKNTHGNCSMSSS 540


>gi|325973220|ref|YP_004250284.1| aspartyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651822|gb|ADX97904.1| aspartyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 543

 Score =  328 bits (842), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 167/560 (29%), Positives = 259/560 (46%), Gaps = 40/560 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              V + G++  VR    I+FL IRD  G  QVV        +  +    E  + I+G  
Sbjct: 19  NQKVVIGGFIETVRKLKDIVFLVIRDGSGKIQVVFPK-----KEVELPPRESTVLIEG-- 71

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES-IRFKYRFLDLRRD 136
              +++  N+     ++E+  +++E+ S ++        E +  E   R KYR+LDLRR 
Sbjct: 72  --TTSQKKNSE----ELEILGERMEVFSTSKPSFPIDLNEEKMSEEKYRMKYRYLDLRRS 125

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            LH NI   ++        +   NF E +TPIL+  S EGA  F     VN    + L Q
Sbjct: 126 ALHNNIEFCSKAKFIASSYLHILNFREITTPILSFPSREGAETFKTEENVNVNRSFTLAQ 185

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +PQ YKQLLM +GF++YFQ A  FR E  R DR   EF QLD+EMSF  Q+ +   +E +
Sbjct: 186 SPQIYKQLLMIAGFEKYFQFATSFRAEKMREDRQ-YEFSQLDIEMSFSTQEKLFAIIEKL 244

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +  + ++    +     F RI + +A  +YGTDKPDLR    + ++   F   +      
Sbjct: 245 IISLIKKLVKSDFPDLPFRRISFQEAFEKYGTDKPDLRFSPYIVDLFSSFDKKQVLPTQY 304

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
            LS+    +   I        R F     ++ +      +   +    +   ++    + 
Sbjct: 305 CLSLLVERKTINIEELYSEVGRDF-----KYIKKSHSKIIEGQY----DDWMISFSEKLN 355

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN-CNCFEFC 435
            H        I               +GD  +        R  I +++      N F   
Sbjct: 356 NHSEEFYLFYI------------CCNSGDKRESLLRMGRIRTAIIKQIKNREWENNFSLV 403

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           WI D+P++E +  E K+  +H+PFT+     +SL  ++LL  K+  YDLV NG EIASGG
Sbjct: 404 WITDWPYFEES-LEGKLVTSHHPFTL--PTKDSLSKDNLLDWKSHGYDLVLNGVEIASGG 460

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            R + S++  + FS +G S E +   FG    A   G+PPH GIA G DR++  LL  K+
Sbjct: 461 QRIYNSDLQAKIFSILGYSSEEINQEFGWFLEALNYGVPPHLGIAIGWDRLMSELLNLKS 520

Query: 556 VREVSLFPMSQNFCDLLMGS 575
           +REV  FP + +    +  S
Sbjct: 521 IREVIAFPKNTHGNCSMSSS 540


>gi|331001293|ref|ZP_08324919.1| GAD domain protein [Parasutterella excrementihominis YIT 11859]
 gi|329569020|gb|EGG50816.1| GAD domain protein [Parasutterella excrementihominis YIT 11859]
          Length = 277

 Score =  328 bits (841), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 94/277 (33%), Positives = 138/277 (49%), Gaps = 6/277 (2%)

Query: 326 VWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE 385
           +      G    R+  D   E+ +  G  GLAYI     ++G      P+ K+L+    +
Sbjct: 1   MALRVPHGASMPRSEIDGYTEFVKIYGAKGLAYIKVNDIKAGREGLQSPIVKNLSDDVLK 60

Query: 386 AIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA-----QELGIINCNCFEFCWIMDF 440
           AI  R   QDGD  FF A             R  +      +  G+     +   W++DF
Sbjct: 61  AIIERTGAQDGDVIFFGADRKKIVFDSLGALRLKVGHSGFGKSHGLF-EEGWRPLWVIDF 119

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P +E++EEE++    H+PFT P+ G E     D  +  A  YD+V NG+EI  G IR H 
Sbjct: 120 PMFEYDEEEERWVACHHPFTSPKDGDEDKLVTDPENCFAKAYDMVLNGWEIGGGSIRIHK 179

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           ++V  + F+ + I  E    +FG L    Q G PPHGG+A G+DRIV ++ GA ++R+V 
Sbjct: 180 ADVQSKVFNALKIGPEEARAKFGFLLDVLQYGAPPHGGLAFGLDRIVTMMCGADSIRDVI 239

Query: 561 LFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
            FP +Q    LL  +PS V  +QLREL +R+    KK
Sbjct: 240 AFPKTQRAQCLLTQAPSPVDEKQLRELHIRLRNEHKK 276


>gi|322704787|gb|EFY96378.1| putative aspartate--tRNA ligase [Metarhizium anisopliae ARSEF 23]
          Length = 694

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 166/629 (26%), Positives = 260/629 (41%), Gaps = 60/629 (9%)

Query: 22  RLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
            ++G++ + R  G  + F D+    G    + +      E  +  R         +V +R
Sbjct: 72  VITGFLGKRRNVGKHLSFADLTTSSGEVIQICSHADGGLESHEKFRQVPAFAPV-VVCAR 130

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLH 139
                 A         S + + +  +     +P               R L +R    L 
Sbjct: 131 PEPPAQAAGEEQNSSSSKRTLYLRDIRSLNTVPKDLIVTSDVQFPQTKRHLQIRFHPELQ 190

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             +  R+ +   +   ++ + F +  TP L  S+ EGAR+FLVP+R  +G+ YAL Q+PQ
Sbjct: 191 ARLQFRSWLKGQLNQSLLEKGFTDVETPTLFKSTSEGAREFLVPTR-QRGTAYALSQSPQ 249

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV--------------- 244
           QYKQ+LMASG  +Y Q A C+RDED R+DR P EF QLDME +F                
Sbjct: 250 QYKQILMASGIGQYMQWARCYRDEDLRTDRQP-EFSQLDMEWAFAGSAKVQADVNDILLA 308

Query: 245 ---------EQDDILNTMENVLRGVFEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLR 294
                       DI      +L  +  E +  +    + F  + + ++I  YG+DKPDLR
Sbjct: 309 ALLRLRPARSYSDIRGERIPILSDILNEPAPADESPAHKFTTLTFAESIAAYGSDKPDLR 368

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNE---WAR 349
            P  +H + +   +  F      LS +P  E +  P K    +  R F  +  +    A 
Sbjct: 369 IPNKIHALEDIEPYRNFVSMITHLS-DPLIEAFTFPLKDCSPSEARKFIIKFMDNLPPAL 427

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
           +    G   I    D    ++G   +         + +     + DGD   F A +  + 
Sbjct: 428 ANNPDGKPQILIH-DSRQPLSGFSSLG-FEYESVLDKLSQGQGINDGDLVVFQAREKPQG 485

Query: 410 CSFAA-----DARNHIAQEL---------GIINCNCFEFCWIMDFPFYEWNEEEK----- 450
                     D RN + + L          + +    +F W+ +FP ++  EE +     
Sbjct: 486 QYCLGSTKIGDIRNALWKGLVEEGYMEKPKLGDPESLQFVWVTEFPMFKPVEEGEPGQGG 545

Query: 451 --KIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
              I  AH+PFT P       +   D L  ++  YDLV NG EI  G  R H+++V    
Sbjct: 546 AAGISAAHHPFTAPLSENDLEILFTDPLQARSAAYDLVLNGIEIGGGSERIHVADVQEFI 605

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +V    +     F  L+ A + G PPH G A G DR+V LL     VR+V  FP +  
Sbjct: 606 MRDVLKMTDQRIKDFSHLFDALRAGCPPHAGFALGFDRLVALLTDTSTVRDVIAFPKTMK 665

Query: 568 FCDLLMGSPSTVSVEQLRELGLRIVENPK 596
             D  + SPS +S EQL   GL+++   K
Sbjct: 666 GEDPFVRSPSKLSNEQLAPYGLQLMSKSK 694


>gi|94263255|ref|ZP_01287071.1| GAD:tRNA synthetase, class II (D, K and N) [delta proteobacterium
           MLMS-1]
 gi|93456338|gb|EAT06462.1| GAD:tRNA synthetase, class II (D, K and N) [delta proteobacterium
           MLMS-1]
          Length = 300

 Score =  326 bits (836), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 7/301 (2%)

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRMNEWARSQGQPG 355
           + +  +T    +   +VF  ++      +   I AKG    +R   D +  +A   G  G
Sbjct: 3   LELVEITHVVKNCGLQVFRDVVENGGMVKS--INAKGCAYFSRKDLDDLTAYAGEFGAKG 60

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LA++  + D         P+AK       +A+   L  Q  D  FF+A  P       A+
Sbjct: 61  LAWVKIKEDGQ----WQSPIAKFFTAEEQQAMVEALAAQPADLLFFVADQPTVVHQALAE 116

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            R  +A+ L +++   F F W+ DFP  E++ E K+    H+PFT P+     L  +D  
Sbjct: 117 LRLELARRLELVSREDFSFVWVTDFPLLEYDAEAKRHAAVHHPFTAPREEDLPLLDSDPG 176

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            +++  YDLV NG EI  G IR H  ++  Q F+ +GI+ E V+++F  L +A + G PP
Sbjct: 177 RVRSRAYDLVLNGNEIGGGSIRIHQPDLQRQVFTALGITPEEVKDKFAFLVQALELGAPP 236

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGG+A G+DR++MLL G  ++R+V  FP +Q     L  +P+ V+ +QL EL LR     
Sbjct: 237 HGGMAFGLDRLLMLLAGCDSIRDVIAFPKTQKATCPLTEAPAPVARKQLTELSLRPDWKE 296

Query: 596 K 596
           +
Sbjct: 297 E 297


>gi|322698256|gb|EFY90028.1| putative aspartate--tRNA ligase [Metarhizium acridum CQMa 102]
          Length = 694

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 169/634 (26%), Positives = 267/634 (42%), Gaps = 72/634 (11%)

Query: 23  LSGWVHRVRPHGG-IIFLDIRDHYG---ITQVVANPDSACFEIAKSVRSEWVLCIDGLV- 77
           + G++ + R  G  + F D+   +G        AN      E  + V +   + +     
Sbjct: 73  IRGFLGKRRNVGKHLSFADLTTSWGEVIQICSHANGGQEAHEKFRQVPAFAPVVVHTQPE 132

Query: 78  --MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR- 134
                + E  N++     + L  + I  L+      +P               R L +R 
Sbjct: 133 PPAQSAGEEQNSSSSKRTLYL--KDIRSLNT-----VPKDLIVTSDVQFPQTKRHLQIRF 185

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
              L   +  R+ + + +   ++ + F +  TP L  S+ EGAR+FLVP+R  +G+ Y+L
Sbjct: 186 HPELQARLKFRSWLKSQLNQSLLEKRFTDVETPTLFKSTSEGAREFLVPTR-QRGTAYSL 244

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-------EQD 247
            Q+PQQYKQ+LMASG  RY Q A C+RDED R+DR P EF QLDME +F        + +
Sbjct: 245 SQSPQQYKQVLMASGIGRYMQWARCYRDEDLRTDRQP-EFSQLDMEWAFAGSAKVQADIN 303

Query: 248 DILNTMENVLRG-------------VFEEFSN-----GNTVSNNFLRICYDDAIRRYGTD 289
           DIL    + LR              +  +  N         ++ F  + + ++I  YG+D
Sbjct: 304 DILLAALSRLRPARSYSDIRGERIPILSDILNEPAPTDEPPAHKFTTLTFAESIAAYGSD 363

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAF-CDRMNE 346
           KPDLR P  +H + +   + +F      LS +P  E +  P K    +  R F    M+ 
Sbjct: 364 KPDLRIPNKIHALEDTEPYRDFISMITHLS-DPLIEAFTFPLKDCSPSDARKFVIKFMDN 422

Query: 347 W--ARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG 404
              A +    G   I    D    + G   +         + +     + DGD   F A 
Sbjct: 423 LPPALANNPDGKPQILIH-DSRQPLCGFSSLG-FEYESVLDKLSQGQGINDGDLVVFQAR 480

Query: 405 DPLKFCSFAA-----DARNHIA---------QELGIINCNCFEFCWIMDFPFYEWNEEEK 450
           +              D R  +          ++  + +    +F W+ +FP ++  EE +
Sbjct: 481 EKPPGQYCLGSTKIGDIRKALWTGLVEEGYMEKPKLGDPESLQFVWVTEFPMFKPVEEGE 540

Query: 451 -------KIDFAHNPFTMPQGG-MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
                   I  AH+PFT P       +   D L  ++  YDLV NG EI  G  R H+++
Sbjct: 541 PGQGGAAGISAAHHPFTAPLSEKDLEILFTDPLQARSAAYDLVLNGIEIGGGSERIHVAD 600

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           V      +V    +     F  L+ A + G PPH G A G DR+V LL     VR+V  F
Sbjct: 601 VQEFIMRDVLKMTDQRIKDFSHLFDALRAGCPPHAGFALGFDRLVALLTDTSTVRDVIAF 660

Query: 563 PMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           P +    D  + SPS ++ EQL   GL+++   K
Sbjct: 661 PKTMKGEDPFVRSPSKLNNEQLAPYGLQLMSKSK 694


>gi|254994367|ref|ZP_05276557.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 341

 Score =  325 bits (832), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 141/344 (40%), Positives = 206/344 (59%), Gaps = 5/344 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +    
Sbjct: 60  LEIADSVRNEFVVTIKGTVHARGEKAINDKLATGKVEVLAEEITILNTSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E SF+ +++I    E++L  V +E  N       F R+ Y +A+ R+G+DKPD+R  + 
Sbjct: 239 LETSFLTKEEIQAITEDMLVDVVKEAKNITI-DKPFPRMTYKEAMDRFGSDKPDIRFGLE 297

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + NV++     +F+VF   +      +     A     +R   D
Sbjct: 298 LQNVSDVVKDVDFKVFQSAIENGGEVKAINAKAAAANFSRKDLD 341


>gi|218513947|ref|ZP_03510787.1| aspartyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 281

 Score =  323 bits (828), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 180/281 (64%), Positives = 225/281 (80%), Gaps = 2/281 (0%)

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
           YG+DKPDLRNPI+M  VTEHF  S F+VF+ +++ NP  ++WAIPAK GG +RAFCDRMN
Sbjct: 3   YGSDKPDLRNPIVMETVTEHFAGSGFKVFAGMIASNPKVQIWAIPAKTGG-SRAFCDRMN 61

Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD 405
            WA+SQGQPGL YIFWR  E+  + G GP+AK++    TEAIR +L + DGD+CFF+AG+
Sbjct: 62  AWAQSQGQPGLGYIFWR-SENDKLEGAGPLAKNIGEERTEAIRTQLGLGDGDACFFVAGE 120

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
           P KF  FA +AR    +EL +++ + FE CWI+DFPF+EWN+EEKK+DFAHNPF+MPQGG
Sbjct: 121 PEKFYKFAGEARTKAGEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQGG 180

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
           +++L   D L+IKAFQYD VCNGFEIASG IRN   E M+ AF  VG+S++ VE+RFGGL
Sbjct: 181 LDALTNQDPLTIKAFQYDAVCNGFEIASGSIRNQSPETMVAAFEKVGLSQQDVEDRFGGL 240

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           YRAFQ G PPHGG A GIDRIVMLL+GAKN+RE+SLFPM+Q
Sbjct: 241 YRAFQYGAPPHGGAAFGIDRIVMLLVGAKNLREISLFPMNQ 281


>gi|213580156|ref|ZP_03361982.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 260

 Score =  317 bits (812), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 83/259 (32%), Positives = 126/259 (48%), Gaps = 1/259 (0%)

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           R   D    + +  G  GLAYI       G      PVAK L     EAI  R   QDGD
Sbjct: 1   RKQIDDYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVAKFLTADIVEAILERTGAQDGD 60

Query: 398 SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN 457
             FF A +           R  + ++L + + + +   W++DFP +E ++ E  +   H+
Sbjct: 61  MIFFGADNKKVVADALGALRLKLGKDLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHH 119

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           PFT P+    S          A  YD+V NG+E+  G +R H  E+    F  +GI+++ 
Sbjct: 120 PFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQE 179

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
              +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+  +PS
Sbjct: 180 QREKFGFLLDALKYGTPPHVGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPS 239

Query: 578 TVSVEQLRELGLRIVENPK 596
             +   L ELG+++V+  +
Sbjct: 240 FANQAALTELGIQVVKKAE 258


>gi|302409574|ref|XP_003002621.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261358654|gb|EEY21082.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 599

 Score =  312 bits (799), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 147/525 (28%), Positives = 225/525 (42%), Gaps = 64/525 (12%)

Query: 129 RFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R L LR    L +++  R  +  S+   M    +++  TP L  S+ EGAR+FLVP+R  
Sbjct: 80  RHLQLRFHAKLKESLRFRAFLKASLGQTMSKLGYMDVETPTLFKSTSEGAREFLVPTR-R 138

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
            G  YALPQ+PQQYKQ+LMA+G   Y+Q A C+RDED R+DR P EF Q+D+E SF   +
Sbjct: 139 AGHAYALPQSPQQYKQVLMAAGLGGYYQFARCYRDEDHRADRQP-EFTQMDLEKSFATGE 197

Query: 248 DI-------LNTMENVLRGVFEE---------------------------FSNGNTVSNN 273
            I       +    + +R  +                             + +   ++  
Sbjct: 198 TIQADVEAFMQATWDAMREEYNRKADDTSFIPHRKSAQSSDEPSGGEPVPYKDYPAIATP 257

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           F R+ Y + +  YG+DKPDLR P  +  V  H       + + +   NP  + W      
Sbjct: 258 FRRMKYQECMDLYGSDKPDLRIPNRIERVDTHLSPGFVSMITDL--ENPIVDAWVFRPHE 315

Query: 334 GGGNRAFCDRMNEWARSQGQ-----PGLAYIFWRLDESGNVAGMGPVA----KHLNIVNT 384
               +   + M  + ++  +     P  A      D S  + G   +     K L    +
Sbjct: 316 DADRKEVHEFMQNFLQNLHKSHSQNPDGAPQALMYDTSKPLEGFSALGPDGLKTLQDAAS 375

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLK---FCSFAADARNHI---AQELGIINCNC-FEFCWI 437
               +   +++GD   F A          +   + R  +   A E  ++  +  F+F W+
Sbjct: 376 PESGLST-LENGDVVVFQARQDRPHQGGSTKLGEVRIALYHAAIEAQLLERDDSFQFLWV 434

Query: 438 MDFPFYEWNEE-------EKKIDFAHNPFTMPQG-GMESLKGNDLLSIKAFQYDLVCNGF 489
            DFP +  NEE              H+PFT P       L   D L  KA  YDLV NG 
Sbjct: 435 TDFPMFTPNEEVDVGQGGSSGFSATHHPFTAPLTVEDLELLFTDPLKAKADHYDLVLNGV 494

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G  R H++ +    F ++    +     F  L +A + G PPH G A G DR   +
Sbjct: 495 ELGGGSRRIHVAAMQEFIFRDILQMTKPKMAEFSHLLKALRAGCPPHAGFALGFDRFAAV 554

Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           L G+ +VR+V  FP +    D   G P  +S EQL    L++ + 
Sbjct: 555 LSGSSSVRDVIAFPKNNKGVDEFAGGPGKISDEQLTTYHLQLRKK 599


>gi|289674667|ref|ZP_06495557.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 258

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 88/259 (33%), Positives = 132/259 (50%), Gaps = 3/259 (1%)

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           R+  D   ++    G  GLAYI       G      P+ K +   N   I  R+   DGD
Sbjct: 1   RSQIDDYTKFVSIYGAKGLAYIKVNERAKGPEGLQSPIVKFIPEDNLNVILDRVGAVDGD 60

Query: 398 SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN 457
             FF A             R  I  +L +  C  +   W++DFP +E N++       H+
Sbjct: 61  IVFFGADKFKIVSEALGALRIKIGNDLKLHTCE-WAPMWVVDFPMFEENDD-GSFTALHH 118

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           PFT P+   E L+ N   +  +  YD+V NG E+  G IR H  E+    F  +GI+++ 
Sbjct: 119 PFTAPKCTPEELEAN-PATALSRAYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGIAEDE 177

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
            + +FG L  A + G PPHGG+A G+DR+VML+ GA+++REV  FP +Q+  D++  +P 
Sbjct: 178 QQEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAADVMTQAPG 237

Query: 578 TVSVEQLRELGLRIVENPK 596
            V  + LREL +R+ E PK
Sbjct: 238 VVDAKALRELHIRLREQPK 256


>gi|256028558|ref|ZP_05442392.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766478|ref|ZP_06525856.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289718033|gb|EFD82045.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 283

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 88/287 (30%), Positives = 139/287 (48%), Gaps = 7/287 (2%)

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ-GQPGLAYIFWRLDESGNV 369
           F  FS  +      +    P      +R F     E+ ++  G  GLAYI    D     
Sbjct: 2   FNAFSSTVQNGGLVKAVVAPNANEKFSRKFISEYEEYVKTYFGAKGLAYIKLTAD----- 56

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
               P+AK L+    +AI  +   + GD  F +A       S     R  I ++L +IN 
Sbjct: 57  GITSPIAKFLSEDEMKAIIEKTQAKTGDVIFIVADKRKVVVSALGALRLKIGKDLDLINK 116

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKAFQYDLVCNG 488
           + F+F W++DFP ++++EEE++    H+PFT  +              I+   YDLV NG
Sbjct: 117 DDFKFLWVVDFPMFDYDEEEQRYKAEHHPFTSIKAEDLDKFLAGQTEDIRTNTYDLVLNG 176

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
            EI  G IR    ++    F  +G+S+E  + +FG    AF+ G PPHGG+A GIDR +M
Sbjct: 177 SEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFGFFLDAFKYGAPPHGGLAFGIDRWLM 236

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           ++L  +++R+V  FP +     L+  +P+TV  +QL EL ++     
Sbjct: 237 VMLKEESIRDVIPFPKTNKGQCLMTEAPNTVDEKQLEELFIKSTYEK 283


>gi|295093803|emb|CBK82894.1| Aspartyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 343

 Score =  308 bits (789), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 136/355 (38%), Positives = 204/355 (57%), Gaps = 14/355 (3%)

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS--NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           MSF  Q+D+    E VL   FE+F+          +  I Y  A+  +GTDKPDLRNP+ 
Sbjct: 1   MSFATQEDVFKVGEEVLSATFEKFAPEGAVVTQAPYPIISYKQAMLEFGTDKPDLRNPLR 60

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           + ++T+ F    F+ F              +  K    ++   ++M ++A+S G  GL Y
Sbjct: 61  IIDLTDFFQRCTFKPFH-----GKTVRAINVHKK---LSKGQHEKMLKFAQSIGMGGLGY 112

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           +    D    ++  GP+ K +       I     +Q GD+ FFIA       SFA   R 
Sbjct: 113 LEILED----MSYKGPIDKFIPDDMKGEIAELAGLQPGDTIFFIADVEELAASFAGQIRI 168

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +   L +   N F FC+I DFP YE+++E KKI F HNPF+MPQGG+E+L   D L I 
Sbjct: 169 ELGNRLDLNEKNAFRFCYINDFPMYEYDKESKKIIFTHNPFSMPQGGLEALNEKDPLDIL 228

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A+QYD+VCNG E++SG +RNH  ++M++AF   G +++ ++ +FG LY AFQ G PPH G
Sbjct: 229 AYQYDIVCNGIELSSGAVRNHDMKIMVKAFEIAGYTEDDLKEKFGALYNAFQFGAPPHAG 288

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           +A G+DR++MLL   +N+REV  FPM+ N  DL+ G+P  V+ +QLRE+ +++ +
Sbjct: 289 MAPGVDRMIMLLRNEENIREVIPFPMNGNAQDLMCGAPGEVTEQQLREVHIKVRQ 343


>gi|330975332|gb|EGH75398.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 289

 Score =  307 bits (786), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 139/290 (47%), Positives = 197/290 (67%), Gaps = 4/290 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SR + GSF+ALPQ+PQ +KQLLM +GFDRY+QIA CFRDED R+DR P EF Q+D+E SF
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQP-EFTQIDIETSF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           + ++DI+   E ++R +F+E  +      +F  + +++A+RRYG+DKPDL
Sbjct: 242 LNEEDIIGLTEKMVRQLFKEVLDLEF--GDFPHMTFEEAMRRYGSDKPDL 289


>gi|260201700|ref|ZP_05769191.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289444109|ref|ZP_06433853.1| predicted protein [Mycobacterium tuberculosis T46]
 gi|289417028|gb|EFD14268.1| predicted protein [Mycobacterium tuberculosis T46]
          Length = 294

 Score =  305 bits (780), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 93/289 (32%), Positives = 139/289 (48%), Gaps = 16/289 (5%)

Query: 323 GYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
            Y    +   G    R   D   +WA+ +G  GLAY+   + E G +   GPVAK+L   
Sbjct: 12  PYVGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAYVL--VAEDGTLG--GPVAKNLTEA 67

Query: 383 NTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPF 442
               +   +  + GD  FF AG      +    AR  IA  LG+I+ + + F W++D P 
Sbjct: 68  ERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARVEIANRLGLIDPDAWAFVWVVDPPL 127

Query: 443 YEWNEEE----------KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +E  +E                 H+ FT P+   E    +D  S+ A  YD+VCNG EI 
Sbjct: 128 FEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWEDRIESDTGSVLADAYDIVCNGHEIG 187

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G +R H  ++  + F+ +G+ K   E +FG L  AF  G PPHGGIA G DR   LL G
Sbjct: 188 GGSVRIHRRDIQERVFAVMGLDKAEAEEKFGFLLEAFMFGAPPHGGIAFGWDRTTALLAG 247

Query: 553 AKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKI 601
             ++REV  FP +    D L  +P+ ++ +Q +E G+     PK++ + 
Sbjct: 248 MDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESGID--AQPKRVQQA 294


>gi|46120751|ref|XP_385110.1| hypothetical protein FG04934.1 [Gibberella zeae PH-1]
          Length = 813

 Score =  305 bits (780), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 175/645 (27%), Positives = 275/645 (42%), Gaps = 70/645 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           L   +    V   G++ + R  H  + F D+    G T +    D+     A ++ ++ +
Sbjct: 185 LDSDNSDKCV---GFLSKRRTIHKQLAFADLTTPSGET-IQICSDAKKDANAHALFTQ-I 239

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
                +V+S S +         +  +  + I  L+   +  +     +  P+   ++ RF
Sbjct: 240 PAYSPVVVSVSGQADEPADKASKTTVYLKDIRALNTVPQNLIVTPEVQFPPKKRHYQIRF 299

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
                  L + +  R+ +   +   +  + F +  TP L  S+PEGAR+FLVP+R  +G 
Sbjct: 300 ----HQELQERLKFRSWLKGELTKGLQEKGFTDIETPTLFKSTPEGAREFLVPTR-QRGK 354

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV------ 244
            YAL Q+PQQYKQ LMASG  RY Q A CFRDED R+DR P EF QLDME SF       
Sbjct: 355 AYALNQSPQQYKQTLMASGISRYMQWARCFRDEDSRADRQP-EFTQLDMEWSFAGASKVR 413

Query: 245 -EQDDILNTMENVLRGV--FEEFSN----------------GNTVSNNFLRICYDDAIRR 285
            + +DI+ +    LR V  ++E                      V++ F  + + D I  
Sbjct: 414 QDVNDIILSALEALRPVHSYQEIRGERIPVLSEIPQGTRPADEPVAHTFTTLKFQDCISS 473

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR------A 339
           YG+DKPDLR P  +H + +   + +F      L  +P  E +  P      N        
Sbjct: 474 YGSDKPDLRIPNKIHALPDLEPYKQFVSMITHLD-DPLIEAFTFPLSTEDPNEARKLVTK 532

Query: 340 FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC 399
           F D +   + +    G   I    D    + G   +       +   +     ++ GD  
Sbjct: 533 FMDNLPS-SLADNPDGKPQILV-CDRKAPLQGFSSLG--FEFQDVIDLVAGEGVEQGDLV 588

Query: 400 FFIAGDPLKFC-----SFAADARNHIAQEL---------GIINCNCFEFCWIMDFPFYEW 445
            F A +  K       +   D RN + + L          + +    +F W+ DFP ++ 
Sbjct: 589 IFQAREKPKGQYCSGSTKIGDIRNALWKFLVEEGQMEKPRLGDPGSLQFVWVTDFPMFKP 648

Query: 446 NEEEK-------KIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
            E+ +        I  +H+PFT P       L   D L  K+  YDLV NG E+  G  R
Sbjct: 649 TEKGEPGQEGAAGIAASHHPFTAPLSKTDLELLFTDPLQAKSAAYDLVLNGVEVGGGSER 708

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            H++ V     S+V    +     F  L+ A + G PPH G A G DR+V LL     VR
Sbjct: 709 IHIATVQKFIMSDVLQMTDKRIADFAHLFEALESGCPPHAGFALGFDRLVALLTDTATVR 768

Query: 558 EVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKIS 602
           +V  FP +    D  + SPS ++ EQL   GL++  + +K   + 
Sbjct: 769 DVIAFPKTMKGEDPFVKSPSRLTDEQLEPYGLQLRRSDQKGSDVE 813


>gi|302928295|ref|XP_003054676.1| hypothetical protein NECHADRAFT_31440 [Nectria haematococca mpVI
           77-13-4]
 gi|256735617|gb|EEU48963.1| hypothetical protein NECHADRAFT_31440 [Nectria haematococca mpVI
           77-13-4]
          Length = 709

 Score =  301 bits (770), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 174/636 (27%), Positives = 272/636 (42%), Gaps = 80/636 (12%)

Query: 24  SGWVHRVRP-HGGIIFLDIRDHYG-ITQVVAN--PDSACFEIAKSVRSEWVLCIDGLVMS 79
           SG + + R     +IF D+    G + Q+ A+   D     + + V +   + +D +  +
Sbjct: 82  SGLLGKKRAVSKNLIFADLTTSSGEVIQLCADAANDPEAHALLRDVPAFSPVLVDAINET 141

Query: 80  RSAETINANIITG-QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
              E+I     T  +  +S   +  L+   +  +        P    ++ +F       L
Sbjct: 142 PKNESIGEPSSTSSKPTVSLTNLRTLNSVPKDLIVTKEVNFPPHKRHYQIKF----HPEL 197

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
              +  R+ +   +   ++ + FI+  TP L  S+PEGAR+FLVP+R  +G  YAL Q+P
Sbjct: 198 QARLKFRSWLKAELTKGLLNKGFIDVETPTLFKSTPEGAREFLVPTR-RRGMAYALNQSP 256

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-------EQDDILN 251
           QQYKQ+LMASG  +Y Q A C+RDED R+DR P EF QLDME SF        + +DI+ 
Sbjct: 257 QQYKQILMASGIGQYMQWARCYRDEDSRADRQP-EFTQLDMEWSFAGAAKVRQDVNDIVL 315

Query: 252 TMENVLR--GVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTDKPDL 293
                LR    ++E  N                   +++ F  I + D+I  YGTDKPDL
Sbjct: 316 EALEALRPAHSYKEIRNQRVPILTEIPDGPQPTDEPLAHEFTTIKFQDSIASYGTDKPDL 375

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR------AFCDRM-NE 346
           R P  +H + +   + +F      +  +P  E +  P +             F D +   
Sbjct: 376 RIPNKVHAIPDLEPYRQFVSMITDIE-DPLVEAFTFPLENVSPQEAREFVIKFMDDLPTG 434

Query: 347 WAR-SQGQPG-LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG 404
            A    GQP  L Y     D S  + G+  V         + +    ++ DGD   F A 
Sbjct: 435 LANNPDGQPSVLVY-----DSSKPLMGLSSVG-FEFEAILDLVSEGKELNDGDLVVFQAR 488

Query: 405 DPL-----KFCSFAADARNHIAQEL---------GIINCNCFEFCWIMDFPFYEW----- 445
           +       K  +   + R+ + + L          +      +F W+ +FP ++      
Sbjct: 489 EKHQGQYCKGSTKIGELRSALWKALVEAEYMSTPKLGTPGSLQFVWVTEFPMFKPVEEGE 548

Query: 446 --------NEEEKKIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
                    E    I  +H+PFT P       L   + L  K+  YDLV NG E+  G  
Sbjct: 549 PGQEGEPGQEGSAGIAASHHPFTAPLSQADLELLFTNPLDAKSAAYDLVLNGVEVGGGSE 608

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H++EV      ++    +     F  L+ A Q G PPH G A G DR+V L+     V
Sbjct: 609 RIHVAEVQKFIMKDILKVPKKRIADFAHLFEALQSGCPPHAGFALGFDRLVALMTDTATV 668

Query: 557 REVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
           R+   FP +    D L+ SPS ++ EQL   GL + 
Sbjct: 669 RDAMAFPKTMKGEDPLVKSPSKLTKEQLEPYGLYLR 704


>gi|56416504|ref|YP_153578.1| asparaginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|56387736|gb|AAV86323.1| asparaginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 325

 Score =  300 bits (767), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 144/326 (44%), Positives = 198/326 (60%), Gaps = 7/326 (2%)

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           + NF  +    ++ RYG+DKPDLRNP+++ +VTE F +S FR F   +           P
Sbjct: 7   TGNFRELLTAISMIRYGSDKPDLRNPLVISDVTEIFRNSGFRTFQAGVEAGEVVRAIPAP 66

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR 390
              G   R+F D   E A+  G  GL Y+ +  D        GP+AK L+      IR  
Sbjct: 67  NTSGK-PRSFFDDKIERAKEFGARGLGYVTYEADG----TAKGPIAKFLSEDELARIRSA 121

Query: 391 LDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK 450
             + +GDS FF++    K   FA   R  +  ELG+I  + F+FCWI+DFP+++   E+ 
Sbjct: 122 AGVGNGDSVFFMSDTADKAADFAGKIRELLGLELGLIEHDTFKFCWIVDFPYFK--CEDG 179

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           ++DF HNPF+MPQG ME+L+  + L I A+QYD+VCNG EI+SG IRNH  +VM +AFS 
Sbjct: 180 ELDFCHNPFSMPQGEMEALEQQNPLDIIAYQYDIVCNGIEISSGAIRNHRLDVMYKAFSM 239

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           VG  ++ V ++FG L RAF+ G PPHGG+A GIDRIVMLL  A N+REV  FP++Q   D
Sbjct: 240 VGYDEQTVNSKFGALVRAFKFGAPPHGGLAPGIDRIVMLLADAPNIREVICFPLNQTGED 299

Query: 571 LLMGSPSTVSVEQLRELGLRIVENPK 596
           LLMG+PS VS   L+EL + +    K
Sbjct: 300 LLMGAPSEVSPAHLQELSIALNIKRK 325


>gi|94263256|ref|ZP_01287072.1| tRNA synthetase, class II (D, K and N):nucleic acid binding,
           OB-fold, tRNA/helicase-type [delta proteobacterium
           MLMS-1]
 gi|93456339|gb|EAT06463.1| tRNA synthetase, class II (D, K and N):nucleic acid binding,
           OB-fold, tRNA/helicase-type [delta proteobacterium
           MLMS-1]
          Length = 345

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 133/297 (44%), Positives = 193/297 (64%), Gaps = 4/297 (1%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACF 59
           +  R+H C  LG   +G  V L GWV R R HGG+IF+D+RD  GITQ+V NP+      
Sbjct: 6   NLKRSHHCNILGREQIGEQVTLMGWVLRRRDHGGVIFIDLRDRRGITQIVFNPEINPEVH 65

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A ++R EWV+ + G V  R A   N  + TG IE+   ++ IL+ ++  P P+  E E
Sbjct: 66  TKAHTLRPEWVVAVRGRVQQRPAGMENPKLTTGAIEVMIDELRILNRSQTPPFPLDEEIE 125

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + +R KYR+LDLRR T+  N+V R +   ++R  +  E+F+E  TP+LT S+PEGARD
Sbjct: 126 VADQLRLKYRYLDLRRPTMAANLVLRHQASQAIRNFLNDEDFLEIETPVLTRSTPEGARD 185

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRVN G F+ALPQ+PQ +KQLLM +G +RY+QI  CFRDED R+DR P EF Q+D 
Sbjct: 186 YLVPSRVNPGRFFALPQSPQLFKQLLMVAGMERYYQIVRCFRDEDLRADRQP-EFTQVDF 244

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           E+SFV+++ ++   E +++ +F+       ++  F R+ Y +A+ R+GTD+PDLR  
Sbjct: 245 ELSFVDEEGVMAVAEGMMKNLFKATLGRE-LAPPFPRMTYAEALARFGTDRPDLRFG 300


>gi|256028559|ref|ZP_05442393.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766479|ref|ZP_06525857.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289718034|gb|EFD82046.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 309

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 139/311 (44%), Positives = 204/311 (65%), Gaps = 9/311 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD---SACF 59
           YRTH+ G+L + ++G  V LSGWV   R     + F+D+RD  G TQ+V N +       
Sbjct: 3   YRTHNLGELRLKNIGEVVTLSGWVDTKRNVSTSLTFIDLRDREGKTQIVFNNELLSEKVL 62

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-ER 118
           E  + ++SE V+ + G V  RS +  N NI TG+IE+ A++IEIL+  + LP  + G + 
Sbjct: 63  EEVQKLKSESVIRVVGEVKERSNK--NLNIPTGEIEVFAKEIEILNACDTLPFQISGVDD 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E++R  YR+LD+RR  +  N+  R R+I S+R  M    F++  TP+LT S+PEGAR
Sbjct: 121 NLSENMRLTYRYLDIRRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVPSR N G+FYALPQ+PQ +KQLLM  G ++YFQIA CFRDED R+DR P EF QLD
Sbjct: 181 DFLVPSRTNPGTFYALPQSPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQP-EFTQLD 239

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +EMSFVE++D++N +E + + VF+  +     +  F R+ Y +A+ R+G+DKPDLR  + 
Sbjct: 240 IEMSFVEKEDVMNEIEGLAKYVFKNVTGEE-ANYTFQRMPYAEAMDRFGSDKPDLRFGVE 298

Query: 299 MHNVTEHFVHS 309
           + ++++   +S
Sbjct: 299 LKDLSDIVKNS 309


>gi|320186112|gb|EFW60856.1| aspartyl-tRNA synthetase [Shigella flexneri CDC 796-83]
          Length = 314

 Score =  290 bits (742), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 128/297 (43%), Positives = 189/297 (63%), Gaps = 6/297 (2%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGLVMSR 80
            L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G V +R
Sbjct: 2   TLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRAR 61

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             + IN ++ TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR  + +
Sbjct: 62  DEKNINRDMATGEIEVLASSLTIINRAD--VLPLDSNHVNTEEARLKYRYLDLRRPEMAQ 119

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
            +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ 
Sbjct: 120 RLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQL 179

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R +
Sbjct: 180 FKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHL 238

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
           + E    +    +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+  
Sbjct: 239 WLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGA 293


>gi|195579672|ref|XP_002079685.1| GD24088 [Drosophila simulans]
 gi|194191694|gb|EDX05270.1| GD24088 [Drosophila simulans]
          Length = 887

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 133/418 (31%), Positives = 212/418 (50%), Gaps = 19/418 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L  +D+   V + GW+   R +    F  +RD YG TQV+ +P +   E    
Sbjct: 463 RTHNCGELTSNDINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLSPKTYGMEEYAE 519

Query: 65  --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YP 121
             V  E ++ ++G V+ R A TIN  + TG +E+ A K+ +L+ A++       +     
Sbjct: 520 TGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRKFNRAG 579

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDF 180
           E +R  +R+LDLR + +  N+  R+ +I  MR  +I    F+E  TP L   +P GA++F
Sbjct: 580 ERLRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 639

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP+R   G FY+L Q+PQQ+KQ+LM+ G DRYFQ+A C+RDE  R DR P EF QLD+E
Sbjct: 640 VVPTR-KAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQP-EFTQLDIE 697

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +SF  +DDI+  +E  LR  + +  +   +   F RI Y++A+ +YG DKPD R   +++
Sbjct: 698 LSFTSRDDIMQLIEETLRYSWPK--DFPRLQTPFRRITYEEAMEKYGNDKPDTRFGFLLN 755

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           NV+E    S+               V A  A   G  R   + + +  +         +F
Sbjct: 756 NVSEIIEKSDEFKEKYDDLGAYAIVVRASEAFWNGAARKHYESLGKEFK-------GTLF 808

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
            R            + K L       +  + D+++ D  F   G  ++  +     R 
Sbjct: 809 VRKFGPTK-DVQEKLGKLLGEDVATEVADKFDLEENDLLFLGIGSKVETRALLGRIRL 865



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 4/115 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +C DL   DVG  V L GW+   + +    FL ++D YG TQ++   D +  +   S
Sbjct: 292 RDLTCNDLRRDDVGKTVTLVGWIPSTKNNK---FLQLKDGYGQTQLMIE-DQSLSDTFLS 347

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              + V+ I G V+ R    +N    TG++E+S   +++L+  +    P+  + +
Sbjct: 348 TPEQTVIQIVGKVLGRPKANVNLKYDTGEVEVSVTSVKVLNPDDPYDGPIKAKEK 402



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SCG+L     G FV LSG + + R +    F ++RD  G    +   +     +A+ + +
Sbjct: 148 SCGELRNHHCGLFVELSGRLIKKRVNR---FAELRDRNGGACQLVVLEDKHPRVARRMNN 204

Query: 68  E---WVLCIDGLVMSRSAETINANIITGQIELSAQKI 101
                 L I GLVM R   + N  + TG+IE+  Q I
Sbjct: 205 MPENTTLTIVGLVMRRPHNSCNQTMPTGEIEVEVQDI 241


>gi|118094150|ref|XP_422251.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 561

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 126/381 (33%), Positives = 183/381 (48%), Gaps = 18/381 (4%)

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           S +GA++FLVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P 
Sbjct: 4   SCQGAKEFLVPSR-EAGKFYSLPQSPQQFKQLLMIGGLDRYFQVARCYRDEGSRPDRQP- 61

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF Q+D+EMSFV+Q  I   +E +L+  + E      ++  F  + YD+A+  YGTDKPD
Sbjct: 62  EFTQIDIEMSFVDQAGIQRLIEGLLQYSWPE--ERGPITTPFPTMTYDEALADYGTDKPD 119

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVN-PGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
            R  + + ++++     +      +L+      +   IP           + + E A+S+
Sbjct: 120 TRFGMKIVDISDTLRRLDIGFVQNVLTYPHGTAKAICIPQGARYLKHKDLESLKEAAKSR 179

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
               +  +  R D     +    + K L       +   L+MQ  D      GD  + CS
Sbjct: 180 FNQEIMDVICRPDG----SLKSLLTKFLGEEQQSELIRVLNMQVDDVVLLAVGDHKRVCS 235

Query: 412 FAADARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGG 465
                R   A  L      + +     F W++DFP +   EE   +++ AH+PFT P   
Sbjct: 236 ALGSLRLESADLLEAAGMVLRDPAALHFLWVVDFPLFLPKEENPSELESAHHPFTAPHPL 295

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
                 +D   +++  YDLV NG EI  G IR H +E        V      V      L
Sbjct: 296 DTDFLYSDPTKVRSQHYDLVLNGSEIGGGSIRIHNAEQQRFVLEKVLKEDSEV---LSHL 352

Query: 526 YRAFQCGMPPHGGIAAGIDRI 546
             A + G PPHGGIA G  R+
Sbjct: 353 LEALEFGAPPHGGIALGSLRL 373



 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 9/186 (4%)

Query: 412 FAADARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGG 465
                R   A  L      + +     F W++DFP +   EE   +++ AH+PFT P   
Sbjct: 367 ALGSLRLESADLLEAAGMVLRDPAALHFLWVVDFPLFLPKEENPSELESAHHPFTAPHPL 426

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
              L  +D   +++  YDLV NG EI  G IR H +E        V      V      L
Sbjct: 427 DTDLLYSDPTKVRSQHYDLVLNGSEIGGGSIRIHNAEQQRFVLEKVLKEDSEV---LSHL 483

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
             A + G PPHGGIA G+DR++ L++G+ ++R+V  FP S    DL+  +P  V+ E+L 
Sbjct: 484 LEALEFGAPPHGGIALGLDRLISLIVGSPSIRDVIAFPKSFKGRDLMGNAPDYVTPEELE 543

Query: 586 ELGLRI 591
              + +
Sbjct: 544 PYHIHV 549


>gi|227555481|ref|ZP_03985528.1| possible aspartyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|227175391|gb|EEI56363.1| possible aspartyl-tRNA synthetase [Enterococcus faecalis HH22]
          Length = 286

 Score =  287 bits (734), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 129/289 (44%), Positives = 181/289 (62%), Gaps = 5/289 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--AC 58
           M + RT  CG++    +   V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +EIA   RSE+V+ + G V+ R  E IN  + TG+ E+ A  I IL+ A+  P  +  + 
Sbjct: 60  WEIADKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDN 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR ++  NI  R ++  ++R  +   +F++  TP L  S+PEGAR
Sbjct: 120 NVNDELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV+ G FYALPQ+PQ +KQLLM +GFDRY+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
           +E +F+  ++I    EN+L  V +E       S  F R+ YD+A+ RYG
Sbjct: 239 IETTFLTPEEIQTYTENMLAEVMKETKGIEI-SVPFPRMSYDEAMARYG 286


>gi|67968455|dbj|BAE00589.1| unnamed protein product [Macaca fascicularis]
          Length = 379

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 125/338 (36%), Positives = 193/338 (57%), Gaps = 12/338 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +    FL +RD +G+ QVV   D +   + K 
Sbjct: 50  RTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFHGLVQVVIPQDESAASVRKI 106

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCEAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFMKKT 166

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 167 EALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGAKEF 226

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 227 LVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 284

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  I + +E +L+  +   ++ + V   F  + + +A+  YGTDKPD R  + + 
Sbjct: 285 MSFVDQTGIQSLIEGLLQYSW--PNDKDPVVVPFPTVTFTEALATYGTDKPDTRFGMKII 342

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
           ++++ F ++E       LS  P   V AI    G    
Sbjct: 343 DISDVFRNTEIGFLQDALS-KPHGTVKAICIPEGAARH 379


>gi|218512638|ref|ZP_03509478.1| aspartyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 239

 Score =  281 bits (718), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 147/238 (61%), Positives = 186/238 (78%), Gaps = 1/238 (0%)

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
              +RAFCDRMN WA+SQ QPGL YIFWR  E   + G GP+AK++    T+AIR +L +
Sbjct: 3   NRWSRAFCDRMNAWAQSQCQPGLGYIFWR-KEGEKLEGAGPLAKNIGEERTDAIRTQLGL 61

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            DGD+CFF+AG+P KF  FA +AR    +EL +++ + FE CWI+DFPF+EW+EEEKK+D
Sbjct: 62  GDGDACFFVAGEPEKFYKFAGEARTKAGEELNLVDRDRFELCWIVDFPFFEWSEEEKKVD 121

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
           FAHNPF+MPQGG+++L+  D L+IKAFQYD VCNGFEIASG IRN   E M+ AF  +G+
Sbjct: 122 FAHNPFSMPQGGLDALQNQDPLTIKAFQYDAVCNGFEIASGSIRNQSPETMVAAFEKIGL 181

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           S++ VE+RFGGLYRAFQ G PPHGG A GIDRI+MLL+GAKN+RE+SLFPM+Q   DL
Sbjct: 182 SQQDVEDRFGGLYRAFQYGAPPHGGAAFGIDRIIMLLVGAKNLREISLFPMNQQAQDL 239


>gi|255030603|ref|ZP_05302554.1| aspartyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 267

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 122/268 (45%), Positives = 172/268 (64%), Gaps = 4/268 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +    
Sbjct: 60  LEIADSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNTSKTPPFYIEDGV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              + +R KYR+LDLRR  ++     R  +  + R ++ A  F +  TP LT S+PEGAR
Sbjct: 120 NVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGAR 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D+LVPSRV  G+FYALPQ+PQ  KQLLM +GFD+Y+QI  CFRDED R DR P EF Q+D
Sbjct: 180 DYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQP-EFTQID 238

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN 266
           +E SF+ +++I    E++L  V +E  N
Sbjct: 239 LETSFLTKEEIQAITEDMLVDVVKEAKN 266


>gi|56416505|ref|YP_153579.1| asparaginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|56387737|gb|AAV86324.1| asparaginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 296

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 147/282 (52%), Positives = 197/282 (69%), Gaps = 3/282 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M+ YRTH C +LGV+ VG+ V LSGWV+R R HGG++F+D+RD YGITQ++ N   +   
Sbjct: 1   MNIYRTHVCNELGVAHVGNEVALSGWVYRKRDHGGLLFVDLRDFYGITQLIFNESENPEL 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           F    ++  E V+ + G+V  RS + +NA+I TG++E+    + ++S A  LPL V    
Sbjct: 61  FNRMATIGLESVITVRGIVAERSEDNVNASIETGRVEVKVSTLTVVSEAAPLPLHVPTSF 120

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
            YPE IR ++RFLDLR D +  +I+ R+ +++ +R  M A  FIE  TPILT+SSPEGAR
Sbjct: 121 SYPEDIRLQHRFLDLRCDKVKNSILLRSMVVSELRRAMEALGFIEVHTPILTSSSPEGAR 180

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           D++VPSR + G FYALPQAPQ +KQLLM  GFD+YFQIAPCFRDED R+DR PGEFYQLD
Sbjct: 181 DYIVPSRTHAGKFYALPQAPQIFKQLLMVGGFDKYFQIAPCFRDEDSRADRSPGEFYQLD 240

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTV-SNNFLRICY 279
           MEMSFV Q+D+   +E VL G+F +F+  +      F RI Y
Sbjct: 241 MEMSFVTQEDVFAAIEPVLYGLFAKFAGADKKVDRQFPRITY 282


>gi|213619157|ref|ZP_03372983.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 252

 Score =  276 bits (706), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 117/254 (46%), Positives = 167/254 (65%), Gaps = 4/254 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADS--LPLDANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSF 238

Query: 244 VEQDDILNTMENVL 257
           +    +   ME ++
Sbjct: 239 MTAPQVREVMEALV 252


>gi|291336619|gb|ADD96165.1| hypothetical protein [uncultured organism MedDCM-OCT-S05-C185]
          Length = 238

 Score =  276 bits (705), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 113/229 (49%), Positives = 155/229 (67%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
              G GP+A  ++    E ++ R  M DGD+ FF AG   +    A +AR  +  +  +I
Sbjct: 8   EGEGRGPIASRISSDVLETLKGRTGMGDGDAIFFSAGKETEAAKLAGNARLKLGVDQELI 67

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             N ++FCW++DFP +E +E   KI+F+HNPF+MPQGG+E+L+  D L I AFQYD+VCN
Sbjct: 68  EQNIYKFCWVVDFPMFEKDEVTGKIEFSHNPFSMPQGGLEALETKDPLDILAFQYDIVCN 127

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G E++SG IRNH+ +VM++AFS  G SKE VE RF G+  AF+ G PPHGG A GIDRIV
Sbjct: 128 GIELSSGAIRNHLPDVMIKAFSIAGYSKEEVEERFSGMLNAFRYGAPPHGGFAPGIDRIV 187

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
           ML+    N+REV LFPM+Q   DL+M +PS VS++QL+EL ++    PK
Sbjct: 188 MLIANEPNIREVILFPMNQKAEDLMMNAPSEVSMQQLKELHIKSNLTPK 236


>gi|254227127|ref|ZP_04920674.1| aspartyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125620351|gb|EAZ48738.1| aspartyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 252

 Score =  274 bits (700), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 118/254 (46%), Positives = 169/254 (66%), Gaps = 4/254 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG L  S VG  V L GWV+R R  GG+IF+D+RD  GI QVV +PD +  F +A 
Sbjct: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +RSE+ + + G V +R    +N  + TG++EL A+ +EI++ ++   LP+   ++  E 
Sbjct: 62  QLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSD--VLPLDFNQKNSEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R KYR+LDLRR  +   I  R +  + +R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 120 QRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVP 179

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           SRV++GSFYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF
Sbjct: 180 SRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDIETSF 238

Query: 244 VEQDDILNTMENVL 257
           +  + +    E ++
Sbjct: 239 MTAEQVRAVTEKMI 252


>gi|20808736|ref|NP_623907.1| lysyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|254478749|ref|ZP_05092118.1| lysyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
 gi|39932223|sp|Q8R7N1|SYK_THETN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|20517378|gb|AAM25511.1| Lysyl-tRNA synthetase class II [Thermoanaerobacter tengcongensis
           MB4]
 gi|214035314|gb|EEB76019.1| lysyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
          Length = 499

 Score =  270 bits (691), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 109/574 (18%), Positives = 208/574 (36%), Gaps = 133/574 (23%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---AC 58
           RT+   D+     +  G  V L+G +   R HG   F DI+D  G  Q+    D+     
Sbjct: 44  RTNLSSDIKNDYENFEGKTVTLAGRIMTKRSHGKASFADIQDRDGRIQIYVRYDNVGGKN 103

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +EI K +    ++ + G V             TG+I ++ +  ++L  + +  LP     
Sbjct: 104 YEIFKLLDIGDIIGVTGEV---------FKTKTGEITINVKDFKLLCKSLQ-VLPEKWHG 153

Query: 119 EYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                +R++ R++DL    ++ +  +KRT+II ++R  +    F+E  TP+L T +    
Sbjct: 154 LKDPDLRYRQRYVDLIINPSVREVFLKRTKIIKAIREFLDNRGFLEVETPVLHTIAGGAA 213

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  GF++ ++I   FR+E       P EF  
Sbjct: 214 ARPFITHHNALDIDMY-LRIALELHLKRLIVGGFEKVYEIGRVFRNEGMDIRHNP-EFTL 271

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           L++  ++ +   ++   E +   V E+ +                    Y   + DL  P
Sbjct: 272 LELYEAYTDYHGMMELTEQLFAYVAEKVNGSTK--------------IIYQGTEIDLTPP 317

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
                + +         F K+ +                         +E AR       
Sbjct: 318 WKRITMVDAIKEYVGIDFEKVAT-------------------------DEEARK------ 346

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
                             +AK LN+        + DM+ G+    +  +           
Sbjct: 347 ------------------IAKDLNLE-----LKKPDMKKGEVIALVFDE----------- 372

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
                    ++  +  +  ++MD+P  E +   K+    +  FT                
Sbjct: 373 ---------LVEKHLIQPTFVMDYPV-EVSPLAKR-KRDNPAFTS--------------- 406

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++    G E+A+     +      + F      +E  +            A + G
Sbjct: 407 ----RFEAFIYGREVANAFSELNDPIDQKERFLEQLRQREAGDEEAHMMDEDFINALEVG 462

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP GG+  G+DR+VM +  + ++R+V LFP  +
Sbjct: 463 MPPTGGLGIGVDRLVMFMTDSYSIRDVILFPTMK 496


>gi|260201701|ref|ZP_05769192.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289444110|ref|ZP_06433854.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289417029|gb|EFD14269.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T46]
          Length = 260

 Score =  269 bits (688), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 122/263 (46%), Positives = 166/263 (63%), Gaps = 5/263 (1%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           M   R+H+ G L   D G  V L+GWV R R HGG+IF+D+RD  GI QVV     D+  
Sbjct: 1   MFVLRSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEV 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
              A  +R+E+ + + G+V  R     N  I TG+IE++A  + +L       LP   + 
Sbjct: 61  LAQAHRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLGECAP--LPFQLDE 118

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R KYR+LDLRRD     I  R+R+  + R  +   +F+E  TP +T S+PEGAR
Sbjct: 119 PAGEELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGAR 178

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           DFLVP+R++ GSFYALPQ+PQ +KQLLM +G +RY+QIA C+RDED R+DR P EF QLD
Sbjct: 179 DFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQP-EFTQLD 237

Query: 239 MEMSFVEQDDILNTMENVLRGVF 261
           MEMSFV+ +DI+   E VL  ++
Sbjct: 238 MEMSFVDAEDIIAISEEVLTELW 260


>gi|256052806|ref|XP_002569941.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|227284697|emb|CAY17471.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 412

 Score =  269 bits (688), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 120/302 (39%), Positives = 172/302 (56%), Gaps = 13/302 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y++H+CG+L    + S V + GW+   R      FL +RD  G+ Q+  + +S       
Sbjct: 41  YKSHACGELSTQHINSTVTVCGWLEHCRLSSR--FLVLRDDRGLIQIYCDKNSL---QIP 95

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
              SE VL + G V +R  + +N  + TG+IE+ A+ IEILS +  L           E 
Sbjct: 96  QFNSESVLRVTGKVQARPKKDVNKRMPTGEIEIVAESIEILSHSSPLSFLPKDAANVNEM 155

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPE--GARDF 180
            R KYR++DLR   + +N+  R+ II  MR  +     F E  TP L   +P   GAR+F
Sbjct: 156 ERLKYRYIDLRSSNMQRNMRFRSSIILQMRSFLCQNNGFTEIETPYLFKITPGESGAREF 215

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +VP++   G +Y LPQ+PQQ+KQLLM SGF +Y Q+A CFRDE  RSDR P EF QLD+E
Sbjct: 216 VVPTKF-PGLWYCLPQSPQQFKQLLMISGFSKYMQVARCFRDETSRSDRQP-EFTQLDIE 273

Query: 241 MSFVEQDDILNTMENVLRGVFEEF---SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           M+F+  DDI   +EN+L  ++      S    +S  F+R+ Y DA+ RYG+DKPD+R   
Sbjct: 274 MAFITPDDIYEIIENMLLYIWPTVQSTSGCQPISTPFMRMQYCDAMSRYGSDKPDVRFGF 333

Query: 298 IM 299
           + 
Sbjct: 334 LF 335


>gi|262197158|ref|YP_003268367.1| lysyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262080505|gb|ACY16474.1| lysyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 561

 Score =  269 bits (687), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 115/594 (19%), Positives = 203/594 (34%), Gaps = 99/594 (16%)

Query: 2   HRYR-----THSCGDLGVSDVG----------------SFVRLSGWVHRVRPHGGIIFLD 40
           + YR     TH C ++     G                  +RL+G +   R  G  +F  
Sbjct: 31  NPYRNDFRPTHQCAEVRAKYEGTQPSEPPSKGIQPVDGETIRLAGRLVARRGFGKTVFAP 90

Query: 41  IRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQK 100
           IRD  G  Q+  N D    +  + +     +          AE +      G++ L    
Sbjct: 91  IRDSSGDLQLFLNVDHLDQDAFEKLLPRLDVGD-----QVGAEGVIFWTKRGELSLLCTH 145

Query: 101 IEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAE 159
             ILS +   PLP   +       R++ R+LDL     + +   KR++I+  +R    A 
Sbjct: 146 FHILSKSLR-PLPDKWKGLTNVETRYRQRYLDLAVNPEVREVFRKRSQILRGLRRFFDAR 204

Query: 160 NFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
            F+E  TP++        AR F+        + Y L  AP+ Y + L+  GFDR ++I  
Sbjct: 205 AFLEVETPMMHPVIGGAAARPFVTHHNALDLTLY-LRIAPELYLKRLLVGGFDRVYEINR 263

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
            FR+E       P EF  L+   ++ +  D+++  E +   + +E +             
Sbjct: 264 SFRNEGLSRAHNP-EFTMLEFYQAYADYRDLMDLTEELFTELAQEVNG-----------T 311

Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
            +        D       + +             VF     V    E  A+ A  G    
Sbjct: 312 LETTWDGKAIDLARPWQRLSVRRAVTEVAGRSPEVFDDP--VRAAEEALAVDAPAGDVLS 369

Query: 339 AFCDRM--NEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
           A  + +  +E +   G+  L  I+       + A    +A  ++    +    R+     
Sbjct: 370 ALLESLSADELSALGGREALGKIW------EDPAQRPALATKISERYADEHTRRVRAGHV 423

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
               F A                       +  +  +  ++ DFP             A 
Sbjct: 424 AFAIFEAA----------------------VEESLVQPTFLTDFPL------------AV 449

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +P         +            +++L   G E+A+     +  +     F     ++ 
Sbjct: 450 SPLARRNEDDPAFCD---------RFELFIGGSEMANAFSELNDPDDQRTRFQAQLEARA 500

Query: 517 VVE----NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             +    +      RA + GMPP  G   GIDR+ MLL G  ++R+V LFP  +
Sbjct: 501 QGQDETMDYDEDYCRALEVGMPPAAGEGIGIDRLTMLLTGQSSIRDVILFPQMR 554


>gi|323485862|ref|ZP_08091197.1| lysyl-tRNA synthetase [Clostridium symbiosum WAL-14163]
 gi|323400850|gb|EGA93213.1| lysyl-tRNA synthetase [Clostridium symbiosum WAL-14163]
          Length = 654

 Score =  267 bits (683), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 99/559 (17%), Positives = 185/559 (33%), Gaps = 123/559 (22%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            +  G  V L+G +   R  G   F +I+D  G  Q     DS   E  K  +   +  +
Sbjct: 59  ETMDGKEVTLAGRMMSKRVMGKASFCNIQDLKGNIQSYVARDSIGEESYKEFKKMDIGDV 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+              TG+I + A+ + +LS + ++ LP          +R++ R++DL
Sbjct: 119 VGI------RGTVFKTKTGEISIHAEAVTLLSKSLQI-LPEKFHGLTNTDMRYRQRYVDL 171

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   ++  VKR+RII  +R  +    F+E  TP+L  ++   A               
Sbjct: 172 IMNPEVRDTFVKRSRIIKEVRNFLDGRGFMEVETPMLVPNAGGAAARPFTTHYNALDEDV 231

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   ++  
Sbjct: 232 KLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYYGMMEL 290

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +E + R V ++                  A   Y   + DL  P     +          
Sbjct: 291 VETMFREVAKKVLGT--------------AKLIYDGVEIDLEKPFERITMV--------- 327

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
                                        D + ++       G+ +   + DE       
Sbjct: 328 -----------------------------DALKKY------KGIDFTQIKTDEE------ 346

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
              AK L          R   + GD    +  +                     +  +  
Sbjct: 347 ---AKALADQYHIEYEAR--HKKGDILSMLFEE--------------------FVEEHLV 381

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +I+D P               +P T  +                 +++L     E+A
Sbjct: 382 QPTFILDHP------------IEISPLTKKKPENPDY---------TERFELFITKREMA 420

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +     +     ++ F          +            A   GMPP GGI  G+DR +M
Sbjct: 421 NAYSELNDPLDQIERFKAQEALLAAGDEEANSMDEDFVNALMVGMPPTGGIGIGMDRFIM 480

Query: 549 LLLGAKNVREVSLFPMSQN 567
           LL  +  +R+V LFP  + 
Sbjct: 481 LLTDSYAIRDVLLFPTMKT 499


>gi|323693201|ref|ZP_08107419.1| lysyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
 gi|323502684|gb|EGB18528.1| lysyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
          Length = 644

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 105/600 (17%), Positives = 198/600 (33%), Gaps = 137/600 (22%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            +  G  V L+G +   R  G   F +I+D  G  Q     DS   E  K  +   +  +
Sbjct: 56  ETMDGKEVTLAGRMMSKRVMGKASFCNIQDLKGNIQSYVARDSIGEESYKEFKKMDIGDV 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+              TG+I + A+ + +LS + ++ LP          +R++ R++DL
Sbjct: 116 VGI------RGTVFKTKTGEISIHAEAVTLLSKSLQI-LPEKFHGLTNTDMRYRQRYVDL 168

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   ++  VKR+RII  +R  +    F+E  TP+L  ++   A               
Sbjct: 169 IMNPEVRDTFVKRSRIIKEVRNFLDGRGFMEVETPMLVPNAGGAAARPFTTHYNALDEDV 228

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   ++  
Sbjct: 229 KLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYYGMMEL 287

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +E + R V ++                  A   Y   + DL  P     +          
Sbjct: 288 VETMFREVAKKVLGT--------------AKLIYDGVEIDLEKPFERITMV--------- 324

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
                                        D + ++       G+ +   + DE       
Sbjct: 325 -----------------------------DALKKY------KGIDFTQIKTDEE------ 343

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
              AK L          R   + GD    +  +                     +  +  
Sbjct: 344 ---AKALADQYHIEYEAR--HKKGDILSMLFEE--------------------FVEEHLV 378

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +I+D P               +P T  +                 +++L     E+A
Sbjct: 379 QPTFILDHP------------IEISPLTKKKPENPDY---------TERFELFITKREMA 417

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +     +     ++ F          +            A   GMPP GGI  G+DR +M
Sbjct: 418 NAYSELNDPLDQIERFKAQEALLAAGDEEANSMDEDFVNALMVGMPPTGGIGIGMDRFIM 477

Query: 549 LLLGAKNVREVSLFP--MSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISVTTI 606
           LL  +  +R+V LFP   +    D        VS ++ +     ++   K   KI  + +
Sbjct: 478 LLTDSYAIRDVLLFPTMKTLGGND--------VSKKEEKT----VITEEKAAEKIDFSNV 525


>gi|300814717|ref|ZP_07094967.1| aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511190|gb|EFK38440.1| aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 197

 Score =  266 bits (680), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 72/197 (36%), Positives = 117/197 (59%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D    +AG          + RN IA++L +I+ N +E  WI DFP +E++E+EK+    H
Sbjct: 1   DLILIVAGKDQVVYDSLGNLRNKIARDLDLIDKNSYEMLWITDFPLFEYDEDEKRYVAKH 60

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +PFT P+     +  ++    +A  YD+V NG E+  G IR +  E+  + F  +G + E
Sbjct: 61  HPFTSPKDEDLDIILSNPEKARAKAYDIVINGDEMGGGSIRINDQEIQKKMFKALGFTDE 120

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
             + +FG L  AF+ G PPHGG+A G+DR+ ML  GA+N+R+V  FP +Q+   LL  +P
Sbjct: 121 DAKEKFGFLLEAFKYGAPPHGGLAYGLDRLTMLFTGAENIRDVIAFPKTQSATCLLTEAP 180

Query: 577 STVSVEQLRELGLRIVE 593
           + +S +QL E+ ++++E
Sbjct: 181 TELSEKQLEEVHIKVIE 197


>gi|289675204|ref|ZP_06496094.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 500

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 110/578 (19%), Positives = 195/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTSVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +   +   + R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            D+    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTAADL---------QDIDKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DENPNVTDRFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPHMR 497


>gi|66044559|ref|YP_234400.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75503030|sp|Q4ZWW0|SYK_PSEU2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|63255266|gb|AAY36362.1| Lysyl-tRNA synthetase, class-2 [Pseudomonas syringae pv. syringae
           B728a]
          Length = 500

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 111/578 (19%), Positives = 196/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTSVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +   +   + R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP   V  +            D+    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTVADL---------QDIDKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DENPNVTDRFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPHMR 497


>gi|330959167|gb|EGH59427.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 500

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 110/578 (19%), Positives = 195/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTSVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +  + +    R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            D+    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTAADL---------QDVDKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DENPSVTDRFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPHMR 497


>gi|330968991|gb|EGH69057.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 500

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 109/578 (18%), Positives = 195/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAAAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTSVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +   +   + R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            D+    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTAADL---------QDIDKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DENPNVTDRFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   G+DR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGVDRLVMLLTDSPSIRDVILFPHMR 497


>gi|148549432|ref|YP_001269534.1| lysyl-tRNA synthetase [Pseudomonas putida F1]
 gi|166229819|sp|A5W890|SYK_PSEP1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|148513490|gb|ABQ80350.1| lysyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 500

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 113/578 (19%), Positives = 199/578 (34%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL                  V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYADKTKEELEAAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E   +V++  +  I       SAE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAAVKTWDLGDI------ISAEGTLARSGKGDLYVEMTNVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +   ++  + R+++I+ +R  +I  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRSQVISHIRKFLIERDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F         + + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMAMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ +  D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGSTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            DR  E A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTAADL---------QDVDRAREIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGH----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I ++P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITEYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DDNPAVTDRFELFIGGREIANAYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPHMR 497


>gi|330950713|gb|EGH50973.1| lysyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 500

 Score =  264 bits (674), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 110/578 (19%), Positives = 195/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTSVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +  + +    R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            D+    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTAADL---------QDIDKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DENPNVTDRFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPHMR 497


>gi|330975435|gb|EGH75501.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 500

 Score =  263 bits (673), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 110/578 (19%), Positives = 195/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGPIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTSVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +   +   + R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            D+    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTAADL---------QDIDKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DENPNVTDRFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTASPSIRDVILFPHMR 497


>gi|26988228|ref|NP_743653.1| lysyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|38258322|sp|Q88MS3|SYK_PSEPK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|24982968|gb|AAN67117.1|AE016340_8 lysyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|313500279|gb|ADR61645.1| LysS [Pseudomonas putida BIRD-1]
          Length = 500

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 114/578 (19%), Positives = 199/578 (34%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL                  V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYADKTKEELEAAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E   +V++  +  I       SAE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAAVKTWDLGDI------ISAEGTLARSGKGDLYVEMTNVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +   ++  + R+++I+ +R  +I  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRSQVISHIRKFLIERDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F         + + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMAMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ +  D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGSTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            DR  E AR  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTAADL---------QDVDRAREIARKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGH----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I ++P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITEYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DDNPAVTDRFELFIGGREIANAYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPHMR 497


>gi|330896020|gb|EGH28243.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 500

 Score =  263 bits (672), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 110/578 (19%), Positives = 195/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTSVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +   +   + R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNPLDMEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            D+    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTAADL---------QDIDKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DENPNVTDRFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPHMR 497


>gi|104780460|ref|YP_606958.1| lysyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|123079246|sp|Q1IDW1|SYK_PSEE4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|95109447|emb|CAK14148.1| lysyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 500

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 112/578 (19%), Positives = 199/578 (34%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL                  V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYADKTKEELEAAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   +   +V++  +  I       SAE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLSEDTLAAVKTWDLGDI------ISAEGTLARSGKGDLYVEMTNVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +   ++  + R+++I+ +R  +I  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRSQVISHIRKFLIERDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F         + + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMAMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ +  D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGSTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            DR  E A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTAADL---------QDVDRAREIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGH----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I ++P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITEYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DDNPAVTDRFELFIGGREIANAYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPHMR 497


>gi|167032114|ref|YP_001667345.1| lysyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|189082963|sp|B0KRL5|SYK_PSEPG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166858602|gb|ABY97009.1| lysyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 500

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 112/578 (19%), Positives = 199/578 (34%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL                  V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYADKTKEELEAAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E   +V++  +  I       SAE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAAVKTWDLGDI------ISAEGTLARSGKGDLYVEMTNVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +   ++  + R+++I+ +R  +I  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRSQVISHIRKFLIERDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F         + + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMAMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ +  D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGSTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            DR  + A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTAADL---------QDVDRARDIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGH----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I ++P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITEYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DDNPAVTDRFELFIGGREIANAYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPHMR 497


>gi|71733658|ref|YP_276011.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|123747561|sp|Q48F26|SYK_PSE14 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71554211|gb|AAZ33422.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 500

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 110/578 (19%), Positives = 195/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLAEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTTVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +  + +    R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            D+    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPDLTAADL---------QDVDKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLKQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DENPSVTDRFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPHMR 497


>gi|320323151|gb|EFW79240.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. B076]
          Length = 500

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 110/578 (19%), Positives = 195/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLAEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTTVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +  + +    R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            D+    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPDLTAADL---------QDVDKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DENPSVTDRFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDTDFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPHMR 497


>gi|320329577|gb|EFW85566.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
 gi|330878327|gb|EGH12476.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
          Length = 500

 Score =  263 bits (672), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 110/578 (19%), Positives = 195/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLAEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTTVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +  + +    R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            D+    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPDLTAADL---------QDVDKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DENPSVTDRFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPHMR 497


>gi|194674189|ref|XP_001789065.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Bos
           taurus]
          Length = 456

 Score =  263 bits (671), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 111/303 (36%), Positives = 178/303 (58%), Gaps = 11/303 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++CG+L  S +G  V L GW+   R +   IFL +RD +G+ QVV   D +   + K 
Sbjct: 47  RTNTCGELRSSHLGQEVTLCGWIQFRRQN---IFLVLRDFHGLVQVVIPQDESAASVKKI 103

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 E V+ + G V+SR     N  + TG+IE+  +  ++L+  ++LP  +    +  
Sbjct: 104 LCEAPMESVVQVSGTVISRPPGQKNPKMPTGEIEIKVKTAKLLNSCKKLPFEIKDFMKKT 163

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDF 180
           E++R +YR+LDLR   +  N+  R++++  MR  +     F++  TP L   +P GA++F
Sbjct: 164 ETLRLQYRYLDLRSVQMQYNLRLRSQMVMKMREYLCNLHGFVDVETPTLFKRTPGGAKEF 223

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           ++PSR   G FY+LPQ+PQQ+K   M  G DRYFQ+A C+RDE  R DR P EF Q+D+E
Sbjct: 224 VIPSR-EPGKFYSLPQSPQQFKPPHMLGGLDRYFQVARCYRDEGSRPDRQP-EFTQIDIE 281

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV+Q  + + +E +L+  +   S+ + +   F  + + +A+  YGTDKPD R  + +H
Sbjct: 282 MSFVDQTGVQSLIEGLLQYSW--PSDKDPLVVPFPSMPFAEALASYGTDKPDTRFGMKLH 339

Query: 301 NVT 303
           + T
Sbjct: 340 HKT 342


>gi|237800111|ref|ZP_04588572.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022967|gb|EGI03024.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 500

 Score =  263 bits (671), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 110/578 (19%), Positives = 195/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTSVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +  + +    R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDLEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            D+    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPDLTAADL---------QDVDKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DDNPSVTDRFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPHMR 497


>gi|325278150|ref|ZP_08143659.1| lysyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324096725|gb|EGB95062.1| lysyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 500

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 112/578 (19%), Positives = 198/578 (34%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL                  V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYADKTKEELEAAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E   +V++  +  I       SAE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAAVKTWDLGDI------ISAEGTLARSGKGDLYVEMTNVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +   ++  + R+++I+ +R  +I  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRSQVISHIRKFLIERDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F         + + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMAMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ +  D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGSTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P                VF  IL  NP      +            DR  + A+  G
Sbjct: 315 FGEPFAR-----------LSVFDSILKYNPELTAADL---------QDVDRARDIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGH----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I ++P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITEYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DDNPAVTDRFELFIGGREIANAYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPHMR 497


>gi|289626067|ref|ZP_06459021.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289646234|ref|ZP_06477577.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330867550|gb|EGH02259.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330894560|gb|EGH27221.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
 gi|330985077|gb|EGH83180.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 500

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 110/578 (19%), Positives = 195/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTTVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +  + +    R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            D+    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPDLTAADL---------QDVDKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DENPSVTDRFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPHMR 497


>gi|170723282|ref|YP_001750970.1| lysyl-tRNA synthetase [Pseudomonas putida W619]
 gi|229559861|sp|B1JD39|SYK_PSEPW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|169761285|gb|ACA74601.1| lysyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 500

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 112/578 (19%), Positives = 200/578 (34%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELEAAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E   +V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAAVKTWDLGDI------IAAEGTLARSGKGDLYVEMTNVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +   ++  + R+++I+ +R  +I  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRSQVISHIRKFLIDRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F         + + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMAMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ +  D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGSTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            DR  + A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTAADL---------QDVDRARDIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGH----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I ++P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITEYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DDNPAVTDRFELFIGGREIANAYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPHMR 497


>gi|330964103|gb|EGH64363.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 500

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 111/578 (19%), Positives = 195/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTSVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +  + +    R+R+I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSRVIAHIRSFLMQRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDLEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            D+    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTAADL---------QDVDKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DDNPNVTDRFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPHMR 497


>gi|312959347|ref|ZP_07773864.1| lysyl-tRNA synthetase, class II [Pseudomonas fluorescens WH6]
 gi|311286064|gb|EFQ64628.1| lysyl-tRNA synthetase, class II [Pseudomonas fluorescens WH6]
          Length = 500

 Score =  262 bits (670), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 109/578 (18%), Positives = 195/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R + C  L                  V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDNYCDALQKQYADKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E   SV++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLSEETLASVKTWDMGDI------IAAEGTLARSGKGDLYVEMTSVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +  + +    R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFLMQRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            D+    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTADDLN---------DIDKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DENPNVTDRFELFIGGREIANAYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPHMR 497


>gi|28868707|ref|NP_791326.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213969084|ref|ZP_03397223.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301384022|ref|ZP_07232440.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302058728|ref|ZP_07250269.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302131690|ref|ZP_07257680.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|38258314|sp|Q886S6|SYK_PSESM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|28851946|gb|AAO55021.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213926082|gb|EEB59638.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|331016329|gb|EGH96385.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 500

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 110/578 (19%), Positives = 195/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTSVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +  + +    R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMQRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDLEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            D+    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTAADL---------QDVDKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DDNPNVTDRFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPHMR 497


>gi|330872775|gb|EGH06924.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 500

 Score =  262 bits (669), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 110/578 (19%), Positives = 195/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAPIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTSVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +  + +    R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMQRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDLEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            D+    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTAADL---------QDVDKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DDNPNVTDRFELFIGGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPHMR 497


>gi|70728520|ref|YP_258269.1| lysyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|123734892|sp|Q4KHL4|SYK_PSEF5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|68342819|gb|AAY90425.1| lysyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 500

 Score =  261 bits (668), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 110/578 (19%), Positives = 195/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R + C DL                  V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RENYCEDLQKKYADKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E   SV++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLSEETLASVKTWDMGDI------IAAEGTLARSGKGDLYVEMTNVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +   +   + R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEEVRQTFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P                VF  IL  NP      +            D+    A+  G
Sbjct: 315 FGEPFAR-----------LSVFDSILKYNPELTADDLN---------DIDKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DDNPNVTDRFELFIGGREIANAYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPHMR 497


>gi|289428129|ref|ZP_06429831.1| nucleic acid-binding domain protein [Propionibacterium acnes J165]
 gi|289158672|gb|EFD06874.1| nucleic acid-binding domain protein [Propionibacterium acnes J165]
          Length = 239

 Score =  261 bits (666), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 110/238 (46%), Positives = 155/238 (65%), Gaps = 1/238 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH  G L  SD+G  V L+GWV   R HGG+ F+D+RD  G+ QVV   +      A  
Sbjct: 3   RTHDAGTLRASDIGKEVTLAGWVGHRRDHGGVAFIDLRDASGLAQVVIRDEILESSGAHD 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R+E+ + + G+V +R     N N+ TG+IE++  ++E+L+ +  LP  +       E  
Sbjct: 63  LRNEYCIRVTGVVEARPEGNANPNLPTGEIEVAITELEVLNPSAPLPFQIDEHVSVGEDA 122

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R KYR+LDLRR   H+ +V R+ + +++R  +   NF +  TP LT S+PEGARDFLVP+
Sbjct: 123 RLKYRYLDLRRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEGARDFLVPA 182

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           R+  G +YALPQ+PQ +KQLLM SG +RY+QIA C+RDED R+DR P EF QLD+EMS
Sbjct: 183 RLAPGCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQP-EFTQLDVEMS 239


>gi|77457287|ref|YP_346792.1| lysyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|123605817|sp|Q3KHF3|SYK_PSEPF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|77381290|gb|ABA72803.1| lysyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 499

 Score =  260 bits (665), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 108/578 (18%), Positives = 195/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R + C  L                  V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 41  RDNYCDALQKQYADKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E   +V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 97  KTLSEETLAAVKTWDMGDI------IAAEGTLARSGKGDLYVEMTSVRLLTKSLR-PLPD 149

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +  + +    R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 150 KHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIP 209

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 210 GGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 268 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVP--------------YGDKVFH 313

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            D+    A+  G
Sbjct: 314 FGEPFVR-----------LSVFDSILKYNPELTADDLN---------DIDKARAIAKKAG 353

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 354 AKVLGF----------------------------------------------------EG 361

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 362 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 398

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 399 DDNPNVTDRFELFIGGREIANAYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVRA 458

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 459 LEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPHMR 496


>gi|229588762|ref|YP_002870881.1| lysyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|229360628|emb|CAY47486.1| lysyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 500

 Score =  260 bits (664), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 108/578 (18%), Positives = 195/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R + C  L                  V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RENYCDALQKQYADKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   +   SV++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLSEDTLASVKTWDMGDI------IAAEGTLARSGKGDLYVEMTSVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +  + +    R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFLMQRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDLEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            D+    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTADDLN---------DIDKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DDNPNVTDRFELFIGGREIANAYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPHMR 497


>gi|43085|emb|CAA37932.1| tls [Escherichia coli K-12]
          Length = 209

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 1/208 (0%)

Query: 389 VRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE 448
            R   QDGD  FF A +           R  + ++LG+ + + +   W++DFP +E ++ 
Sbjct: 1   DRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFE-DDG 59

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +   H+PFT P+    +       +  A  YD+V NG+E+  G +R H  ++    F
Sbjct: 60  EGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVF 119

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             +GI++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +   
Sbjct: 120 GILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAA 179

Query: 569 CDLLMGSPSTVSVEQLRELGLRIVENPK 596
             L+  +PS  +   L EL +++V+  +
Sbjct: 180 ACLMTEAPSFANPTALAELSIQVVKKAE 207


>gi|321313752|ref|YP_004206039.1| lysyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|291482454|dbj|BAI83529.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
 gi|320020026|gb|ADV95012.1| lysyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 499

 Score =  259 bits (661), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 102/576 (17%), Positives = 208/576 (36%), Gaps = 127/576 (22%)

Query: 5   RTHSCGD-------LGVSDVGS---FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   +       L   ++      V ++G +   R  G   F  ++D  G  Q+    
Sbjct: 39  RTHQSQEVISAYQDLTKEELEEKAIEVTIAGRMMTKRGKGKAGFAHLQDLEGQIQIYVRK 98

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   +  +  +S  +    G ++  + +    N+  G++ + A   E+L+ A   PLP 
Sbjct: 99  DSVGDDQYEIFKSSDL----GDLIGVTGKVFKTNV--GELSVKATSFELLTKALR-PLPD 151

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +   K+  + R++II +MR  +    ++E  TP + +  
Sbjct: 152 KYHGLKDVEQRYRQRYLDLIVNPDSKHTFITRSKIIQAMRRYLDDHGYLEVETPTMHSIP 211

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 212 GGASARPFITHHNALDIPLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP- 269

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  DI++  EN++  + +E     T+               YG ++ D
Sbjct: 270 EFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGTTTIQ--------------YGEEQID 315

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
           L+      ++ +    +    F + ++V                     ++  E+A+  G
Sbjct: 316 LKPEWKRIHMVDAVKEATGVDFWEEVTV---------------------EQAREYAKEHG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
                     + +S  V  +  + +       E +             FI G P++    
Sbjct: 355 --------VEIKDSMTVGHI--INEFFEQKIEETLIQPT---------FIYGHPVEIS-- 393

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                                       P  + N E+ +       F + +    +    
Sbjct: 394 ----------------------------PLAKKNPEDPRFTDRFELFIVGREHANAFTEL 425

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +    +  +++                     L+          +++  F     A + G
Sbjct: 426 NDPIDQRERFE-------------------AQLKEREAGNDEAHLMDEDF---VEALEYG 463

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           MPP GG+  GIDR+VMLL  A ++R+V LFP  +  
Sbjct: 464 MPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMRQR 499


>gi|224540812|ref|ZP_03681351.1| hypothetical protein BACCELL_05726 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224517571|gb|EEF86676.1| hypothetical protein BACCELL_05726 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 227

 Score =  257 bits (657), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 115/229 (50%), Positives = 155/229 (67%), Gaps = 4/229 (1%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
            +R+H+CG+L +SDV   V L+GWV R R  GG+ F+D+RD YGITQ+V N   D+A  E
Sbjct: 1   MFRSHTCGELRISDVNKQVTLAGWVQRSRKMGGMTFIDLRDRYGITQLVFNEEVDAALCE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  +  E+V+ I G V  R ++  NANI TG IE+   ++ +L+ A   P  +    + 
Sbjct: 61  NANRLGREFVIQITGTVNERFSK--NANIPTGDIEIIVSELNVLNAALTPPFTIEDNTDG 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + IR KYR+LDLRR ++ +N+  R R+   +R  + ++ FIE  TP+L  S+PEGARDF
Sbjct: 119 GDDIRMKYRYLDLRRPSVRRNLELRHRMTIEVRRYLDSQGFIEVETPVLVGSTPEGARDF 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
           +VPSR+N G FYALPQ+PQ  KQLLM SGFDRYFQIA CFRDED R+DR
Sbjct: 179 VVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADR 227


>gi|300813740|ref|ZP_07094057.1| putative aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300512148|gb|EFK39331.1| putative aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 316

 Score =  257 bits (656), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 118/326 (36%), Positives = 184/326 (56%), Gaps = 11/326 (3%)

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  + +E+V+ + G+V  RS  +IN  I TG+IE+ A +I+IL+ ++  P+ V       
Sbjct: 2   ATKLHNEYVIAVKGIVRMRS--SINDKIPTGKIEVLASEIKILNESQVPPIYVKDNDNVA 59

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E++R KYR LDLR+ ++ +N+  R++I    R       FIE  TP+LT  +PEGARD+L
Sbjct: 60  ENMRLKYRTLDLRKPSMLRNLKLRSKIYKITRDFFYDNGFIEVETPMLTKPTPEGARDYL 119

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           VPSRVN G FYALPQ+PQ  KQLLM SG DRY QI  CFRDED R++R P EF Q+DME+
Sbjct: 120 VPSRVNSGKFYALPQSPQLMKQLLMVSGLDRYIQITKCFRDEDLRANRQP-EFTQIDMEL 178

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SFV +DD+++  E  L+ +F+E  + +       R+ Y +A+ R+G DKPDLR  + + +
Sbjct: 179 SFVTEDDVMSINEKFLQKLFKEMLDIDI-KLPLRRMKYSEAMDRFGVDKPDLRFGMELKD 237

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           +++    S F+VF + +  +       +       ++    ++ E+ +     GL  +  
Sbjct: 238 ISDIVKDSGFKVFEEAVK-DGSVRGINVKNGAEKYSKKKIKKLEEFVKDFKAKGLVQVKV 296

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAI 387
                        + K ++      I
Sbjct: 297 ------EDEIDSSIKKFVSEEILNKI 316


>gi|296329584|ref|ZP_06872070.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305672781|ref|YP_003864452.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296153327|gb|EFG94190.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305411024|gb|ADM36142.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 499

 Score =  256 bits (655), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 101/576 (17%), Positives = 204/576 (35%), Gaps = 127/576 (22%)

Query: 5   RTHSCGD-------LGVSDVGS---FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   +       L   ++      V ++G +   R  G   F  ++D  G  Q+    
Sbjct: 39  RTHQSQEVISAYQDLTKEELEEKAIEVTIAGRMMTKRGKGKAGFAHLQDLEGQIQIYVRK 98

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   +  +  +S  +    G ++  + +    N+  G++ + A   E+L+ A   PLP 
Sbjct: 99  DSVGDDQYEIFKSSDL----GDLIGVTGKVFKTNV--GELSVKATSFELLTKALR-PLPD 151

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +   K+    R++II +MR  +    ++E  TP + +  
Sbjct: 152 KYHGLKDVEQRYRQRYLDLIVNPDSKHTFIARSKIIQAMRRYLDDHGYLEVETPTMHSIP 211

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 212 GGASARPFITHHNALDIPLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP- 269

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  DI++  EN++  + +E     T+               YG ++ D
Sbjct: 270 EFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGTTTIQ--------------YGEEQID 315

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
           L+      ++ +    +    F + ++V                     ++  E+A+  G
Sbjct: 316 LKPEWKRIHMVDAVKEATGVDFWEEVTV---------------------EQAREYAKEHG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
                     + +S  V  +  + +       E +             FI G P++    
Sbjct: 355 --------IEIKDSMTVGHI--INEFFEQKIEETLIQPT---------FIYGHPVEIS-- 393

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                                       P  + N E+ +       F + +    +    
Sbjct: 394 ----------------------------PLAKKNPEDPRFTDRFELFIVGREHANAFTEL 425

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +    +  +++      E  +        +                         A + G
Sbjct: 426 NDPIDQRERFEAQLKEREAGNDEAHLMDED----------------------FVEALEYG 463

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           MPP GG+  GIDR+VMLL  A ++R+V LFP  +  
Sbjct: 464 MPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPQMRQR 499


>gi|254994348|ref|ZP_05276538.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 197

 Score =  256 bits (654), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 73/195 (37%), Positives = 104/195 (53%)

Query: 401 FIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
           F A       +     RN + +EL +IN     F W+ D+P +E++EE  +   AH+PFT
Sbjct: 1   FAADKADIVAASLGALRNKLGKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFT 60

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
           +P+     L   D   + A  YD+V NG+EI  G +R +  EV    F  +G + E  + 
Sbjct: 61  LPKEEDIPLLETDSSKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKE 120

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
           +FG L  A + G PPHGGIA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS
Sbjct: 121 QFGFLMDALEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVS 180

Query: 581 VEQLRELGLRIVENP 595
             QL EL L  V+  
Sbjct: 181 EAQLAELKLETVKKE 195


>gi|330807739|ref|YP_004352201.1| lysyl-tRNA synthetase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375847|gb|AEA67197.1| lysyl-tRNA synthetase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 500

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 107/578 (18%), Positives = 194/578 (33%), Gaps = 138/578 (23%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C  L                  V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDAYCDVLQKQYADKTKEELAEAAIPVKVAGRIVLDRGS----FMVIQDMTGRLQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E   +V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAAVKTWDLGDI------IAAEGTLARSGKGDLYVEMTSVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +  + +    R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            ++    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTADDLN---------DIEKARAIAKKAG 354

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L +                                                      
Sbjct: 355 AKVLGF----------------------------------------------------EG 362

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +EL  +     +  +I  +P +E +   ++                    N
Sbjct: 363 LGKLQVMIFEEL--VEHKLEQPHFITQYP-FEVSPLARR--------------------N 399

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G EIA+     + +E   + F      K+  ++          RA
Sbjct: 400 DENPSVTDRFELFIGGREIANAYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVRA 459

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 460 LEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPHMR 497


>gi|167860683|gb|ACA05124.1| aspartyl-tRNA synthetase [Flammeovirga yaeyamensis]
          Length = 239

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 120/240 (50%), Positives = 160/240 (66%), Gaps = 7/240 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFE 60
           RTH+CG+L  S +G  V LSGW   +R  GG+I++DIRD YGITQ+V     N D+A  E
Sbjct: 3   RTHNCGELRESHIGQTVTLSGWAQAIRDKGGLIWIDIRDRYGITQLVIEDDGNADAALLE 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ V  E+VL   G V+ R+A+  N NI TG IE+   ++ IL+ A+  P  +  E + 
Sbjct: 63  QARKVGREFVLKATGEVIERAAK--NPNIPTGNIEMRLSELTILNEAQTPPFKIEDETDG 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            + +R KYR+LD+RR+ + + +V R +I   +R  +  + FIE  TP+L  S+PEGARDF
Sbjct: 121 GDELRMKYRYLDIRRNPVREKLVLRHKIAQEVRRYLSDQEFIEVETPVLIKSTPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           LVPSR+N G FYALPQ+PQ +KQLLM  G DRYFQI  CFRDED R+DR P EF Q+D E
Sbjct: 181 LVPSRMNPGEFYALPQSPQTFKQLLMVGGMDRYFQIVKCFRDEDLRADRQP-EFTQIDCE 239


>gi|307138529|ref|ZP_07497885.1| aspartyl-tRNA synthetase [Escherichia coli H736]
          Length = 202

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 1/201 (0%)

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
           GD  FF A +           R  + ++LG+ + + +   W++DFP +E ++ E  +   
Sbjct: 1   GDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAM 59

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           H+PFT P+    +       +  A  YD+V NG+E+  G +R H  ++    F  +GI++
Sbjct: 60  HHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINE 119

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS 575
           E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+  +
Sbjct: 120 EEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEA 179

Query: 576 PSTVSVEQLRELGLRIVENPK 596
           PS  +   L EL +++V+  +
Sbjct: 180 PSFANPTALAELSIQVVKKAE 200


>gi|110589242|gb|ABG77130.1| aspartyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 245

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 97/215 (45%), Positives = 141/215 (65%), Gaps = 1/215 (0%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFE 60
           H  R+H CG+L  S +   V + GWVHR R HGG+IF+D+RD  G+ QVV +PD S  F 
Sbjct: 25  HFMRSHYCGELSSSHIDQEVEICGWVHRRRDHGGVIFIDLRDREGLVQVVYDPDRSEIFS 84

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           IA+ VR+E+VL + G V  R   T+N ++ TG+IE+   ++E+L+ AE  P  +      
Sbjct: 85  IAEHVRNEFVLRVKGRVRPRPEGTVNPDLPTGEIEILGLELEVLNRAETPPFQLDEHENT 144

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YR++DLRR  + + I  R ++  S+R  +    F++  TP+LT ++PEGARD+
Sbjct: 145 SEEVRLRYRYVDLRRPEMLEKIRIRAQVTRSLRRFLDDRAFLDIETPMLTKATPEGARDY 204

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           LVPSR + G F+ALPQ+PQ +KQLLM SG DRY+ 
Sbjct: 205 LVPSRTHPGQFFALPQSPQLFKQLLMMSGMDRYYT 239


>gi|307135961|gb|ADN33821.1| aspartyl-tRNA synthetase [Cucumis melo subsp. melo]
          Length = 460

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 133/396 (33%), Positives = 205/396 (51%), Gaps = 47/396 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
           RT  CG+L V DVG  VRL GWV   R HGG+ FL++RDH GI QV   P+         
Sbjct: 81  RTALCGELSVDDVGKRVRLCGWVALHRVHGGLTFLNLRDHSGIVQVTTLPNEFPDAHSAI 140

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-----VFGE 117
             +R E+V+ ++G V SR  +++N  + TG IE++A+ ++IL+                +
Sbjct: 141 NDLRLEYVVAVEGTVRSRPGDSVNVKMKTGFIEVAAEHVQILNSVGSKLPFLVTTADDAK 200

Query: 118 REYPESIRFKYR---FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
               E IR + R   FLDL R           + +  + CR+                  
Sbjct: 201 DSAKEEIRLRLRRQYFLDLLR-----------KALEIIWCRLEFR--------------- 234

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
               D +    +  G+F+ALPQ+PQ +KQ+LM SGFD+Y+QIA CFRDED R+DR P EF
Sbjct: 235 ---SDSIYMYILKPGTFFALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQP-EF 290

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            QLDME+SF   +D+L   E+++R VF E      + N F R+ Y +A+ RYG+D+PD R
Sbjct: 291 TQLDMELSFTTLEDMLRLNEDLIRKVFWEVKGV-QLPNPFPRLTYAEAMSRYGSDRPDTR 349

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR---AFCDRMNEWARSQ 351
             + +++V++ F  S F+VF+  LS     +V  +P+     +       D   E  +S 
Sbjct: 350 FDLQLNDVSDIFADSPFKVFADALSSGGIIKVLCVPSGAKRYSNTALKKGDIYTEAMKS- 408

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI 387
           G  GL ++  ++ + G +  +  ++  L +   E +
Sbjct: 409 GAKGLPFL--KVTDDGTIPSLLKISNMLKMSIVEMV 442


>gi|256751868|ref|ZP_05492740.1| lysyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749275|gb|EEU62307.1| lysyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 499

 Score =  250 bits (639), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 108/578 (18%), Positives = 200/578 (34%), Gaps = 134/578 (23%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SAC 58
           RT+   D+     +  G  V L+G +   R HG   F DI+D  G  Q+    D      
Sbjct: 44  RTNLSSDIKNDYENFEGKVVTLAGRIMSKRSHGKASFADIQDRDGRIQIYVKYDTVGEKN 103

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +EI K +    ++ + G V             TG+I +     ++LS + ++ LP     
Sbjct: 104 YEIFKILDIGDIIGVTGEV---------FKSKTGEITIRVTDFKLLSKSLQI-LPEKWHG 153

Query: 119 EYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                +R++ R+ DL     + +  +KRT+II ++R  +    F+E  TPIL T +    
Sbjct: 154 LKDPDLRYRQRYTDLIINPEVKEVFLKRTKIIKAIREFLDNRGFLEVETPILHTIAGGAA 213

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ +++   FR+E       P EF  
Sbjct: 214 ARPFITHHNALDIDMY-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNP-EFTL 271

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           L++  ++ +       M  +   +F   +     +              Y   + DL  P
Sbjct: 272 LELYEAYTDYYG----MMELTEQLFAYVAQKVNGTTK----------IVYQGTEIDLTPP 317

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
                +                                       D + E+       G+
Sbjct: 318 WKRITMV--------------------------------------DAIKEYV------GV 333

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +   + DE         +AK LN+   E       M+ G+    +  +           
Sbjct: 334 DFNEVKTDEEAIE-----IAKKLNLETKE------GMKKGEVIALVFDE----------- 371

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
                    ++  +  +  ++MD+P  E +   K+                         
Sbjct: 372 ---------LVEQHLIQPTFVMDYPV-EISPLAKR--------------------KHDNP 401

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++    G E+A+     +      + F      +E  +            A + G
Sbjct: 402 AFTSRFEAFIYGREVANAFSELNDPIDQKERFLEQLKQREAGDEEAHMMDEDFINALEVG 461

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR+VM +  A ++R+V LFP  +   D
Sbjct: 462 MPPTGGLGIGVDRLVMFMTDAYSIRDVILFPTMKPKND 499


>gi|315051818|ref|XP_003175283.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311340598|gb|EFQ99800.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 632

 Score =  250 bits (638), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 124/612 (20%), Positives = 213/612 (34%), Gaps = 100/612 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP-DSACFEIAKSVRSEWV 70
              + G  + + G++ + +  G  + F  + D      V     +    +  KS+     
Sbjct: 86  KEQNNGRSITIHGYIGKRKKIGKNMTFARLTDPTISQSVQIVVSNPQALDDLKSIEPNSP 145

Query: 71  LCIDGLVMSRS--AETINANIITG--QIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           + + G+V  +   A+    +   G   +E+  Q +  L+       P             
Sbjct: 146 VVVRGIVKPKENQAQRHEFDEQNGLDSVEVELQDVRCLNE-----FPRDIIITPDTVFPP 200

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L +R D   +  +      N+   R +     EC  P L                 
Sbjct: 201 NKRHLQIRNDASLRQSLAFRANANAALRRALE----ECEPPFLEV--------------- 241

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                    + P  +K                        +     EF  LDMEMSF   
Sbjct: 242 ---------ETPILFK-----------------------STPEGAREF-LLDMEMSFATA 268

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           +D++ T E +++ ++            F R+ Y +A+  YG+DKPD R  + +  V    
Sbjct: 269 EDVMATTEALVKKLWASIMPEPLGPEPFSRMSYYEAMGLYGSDKPDTRFDMKLRRV---D 325

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW-----ARSQ-----GQPGL 356
                    KI S++      A   +G G  +     +  +     A+       G PG 
Sbjct: 326 QSLPPDFIGKIGSLDSPAVE-AFLVRGNGCPKETMRVLQGFMNTPEAKPFLDNPDGAPG- 383

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF---A 413
               + +D S  + G+              +    + + GD  FF       F      A
Sbjct: 384 ---TFVIDSSKPMTGLSAA----GFEAAWGLETLFEPEHGDLLFFQCRKDEPFSGGSIKA 436

Query: 414 ADARNHIAQEL---GIINCN-CFEFCWIMDFPFYEWNEEEK-------KIDFAHNPFTMP 462
            + R  + Q L   G  +    F F W+  FP +  + E +        I   H+PFT P
Sbjct: 437 GELRLAVHQYLVEKGFYSPPVGFNFHWVTGFPLFSPSVETEPGQGGTAGIASTHHPFTAP 496

Query: 463 Q-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           +     +L   D     A  YDLV NG E+  G  R H + V      ++          
Sbjct: 497 RTAEDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSAAVQEFILRDILKVPPSRLQS 556

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
           F  L    + G PPH GIA G DR++ ++ G ++VR V  FP      D ++ +PS ++ 
Sbjct: 557 FSHLLECLRAGCPPHAGIALGFDRLIAVMRGTQSVRNVIAFPKGNKGEDPMVKTPSPMTE 616

Query: 582 EQLRELGLRIVE 593
           + L+   L++ +
Sbjct: 617 DSLQTYHLQLRQ 628


>gi|289579208|ref|YP_003477835.1| lysyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528921|gb|ADD03273.1| lysyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 499

 Score =  249 bits (637), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 106/578 (18%), Positives = 200/578 (34%), Gaps = 134/578 (23%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SAC 58
           RT+   ++     +  G  V L+G +   R HG   F DI+D  G  Q+    D      
Sbjct: 44  RTNVSSEIKNDYENFEGKVVTLAGRIMSKRTHGKASFADIQDREGRIQIYVKYDTVGEKN 103

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +EI K +    ++ + G V             TG+I +  +  ++LS + ++ LP     
Sbjct: 104 YEIFKILDIGDIIGVTGEV---------FKSKTGEITIRVKDFKLLSKSLQI-LPEKWHG 153

Query: 119 EYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                +R++ R+ DL     + +  +KRT+II ++R  +    F+E  TPIL T +    
Sbjct: 154 LKDPDLRYRQRYTDLIINPEVKEIFLKRTKIIKAIREFLDDRGFLEVETPILHTIAGGAA 213

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ +++   FR+E       P EF  
Sbjct: 214 ARPFITHHNALDIDMY-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNP-EFTL 271

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           L++  ++ +       M  +   +F   +     +              Y   + DL  P
Sbjct: 272 LELYEAYTDYYG----MMELTEQLFAYVAQKVNGTTK----------IVYQGTEIDLTPP 317

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
                +                                       D + E+       G+
Sbjct: 318 WKRITMV--------------------------------------DAIKEYV------GV 333

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +   + DE         +AK LN+   E       M+ G+    +  +           
Sbjct: 334 DFNEVKTDEEAIE-----IAKKLNLETKE------GMKKGEVIALVFDE----------- 371

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
                    ++  +  +  ++MD+P               +P    +             
Sbjct: 372 ---------LVEQHLIQPTFVMDYP------------VEISPLAKRKHDNPEF------- 403

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++    G E+A+     +      + F      +E  +            A + G
Sbjct: 404 --TSRFEAFIYGREVANAFSELNDPIDQKERFLEQLKQREAGDEEAHMMDEDFINALEVG 461

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR+VM +  A ++R+V LFP  +   D
Sbjct: 462 MPPTGGLGIGVDRLVMFMTDAYSIRDVILFPTMKPKND 499


>gi|331642480|ref|ZP_08343615.1| aspartyl-tRNA synthetase (Aspartate--tRNA ligase)(AspRS)
           [Escherichia coli H736]
 gi|320186111|gb|EFW60855.1| aspartyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|331039278|gb|EGI11498.1| aspartyl-tRNA synthetase (Aspartate--tRNA ligase)(AspRS)
           [Escherichia coli H736]
          Length = 200

 Score =  249 bits (636), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 1/198 (0%)

Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
            FF A +           R  + ++LG+ + + +   W++DFP +E ++ E  +   H+P
Sbjct: 2   IFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFE-DDGEGGLTAMHHP 60

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           FT P+    +       +  A  YD+V NG+E+  G +R H  ++    F  +GI++E  
Sbjct: 61  FTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQ 120

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
             +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+  +PS 
Sbjct: 121 REKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSF 180

Query: 579 VSVEQLRELGLRIVENPK 596
            +   L EL +++V+  +
Sbjct: 181 ANPTALAELSIQVVKKAE 198


>gi|167574466|ref|ZP_02367340.1| aspartyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 226

 Score =  249 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 113/220 (51%), Positives = 152/220 (69%), Gaps = 4/220 (1%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
           ++     +I   L+   GDS FFIAG P  F  FA + R H+A +L +I    FEFCWI 
Sbjct: 1   MSSDTISSIASELESVTGDSLFFIAGVPRDFYKFAGELRQHLATKLDLIAKQRFEFCWIT 60

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG----NDLLSIKAFQYDLVCNGFEIASG 494
           DFP YEW E+E++IDF HNPF++PQGG E+L+        L++KA+QYD+VCNG E++SG
Sbjct: 61  DFPMYEWAEKEQRIDFCHNPFSLPQGGFEALEAAVTVEQQLALKAYQYDIVCNGIELSSG 120

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +RNH+ E+M +AF   G     +E++FGG+ RA Q G PPHGGIA GIDRIVMLL GA 
Sbjct: 121 AVRNHVPEIMYKAFEIAGYRPADLEDKFGGMLRALQFGAPPHGGIAPGIDRIVMLLAGAS 180

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           N+R+V +FPM+Q   DL+MG+PSTV+  QL +L ++IV  
Sbjct: 181 NLRDVVMFPMNQQGEDLMMGAPSTVAARQLTDLHIQIVPP 220


>gi|225871967|ref|YP_002753421.1| lysine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225792518|gb|ACO32608.1| lysine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 558

 Score =  248 bits (634), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 97/552 (17%), Positives = 182/552 (32%), Gaps = 78/552 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLV 77
           V ++G +   RP G   F  ++      Q+    D    A F++ K +     + + G +
Sbjct: 61  VAIAGRMMANRPAGKAGFAHLQQGGERLQLYVRKDAVGDAAFDVYKLLDLGDHIGVTGYL 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRD 136
                        T ++ +  + +  L+ A  L +P          +R++ R++DL    
Sbjct: 121 ---------FRTRTNELSVHVETLTFLAKA-MLAMPDKYHGLEDVELRYRQRYVDLFMNP 170

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
            + +  VKR +++ + R    +  ++E  TP++   +    AR F+          Y L 
Sbjct: 171 EVREVFVKRAKVLAATRKFFDSRGYVEVETPMMQPIAGGAAARPFITHHNALDIDLY-LR 229

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G DR ++I   FR+E   +   P EF  L+   ++    D++   E 
Sbjct: 230 IAPELYLKRLVVGGLDRVYEINRNFRNEGISTQHNP-EFTMLEFYQAYANYHDLMKLTEE 288

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
            +  V +E +          +     A      D    R   +   + E +        +
Sbjct: 289 FITFVAQEVNGTTVTEFPIPK--GPRAGEVVEIDLAKWRRFTMREAIIEFWPDEFGAKPT 346

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPV 375
           +        +V           R        WA               +E G       +
Sbjct: 347 EAEIAFSIDQVLMRAI------RMMHAHFPNWATVF--------PPETEEQGWAEAEHAL 392

Query: 376 AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435
            K    +      V   +  G           K  S   +          +   +  E  
Sbjct: 393 KKLTIQIQILLQHVERGLPHG-----------KAISELFEL---------LAEEHLIEPT 432

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            I DFP             A +P +  +                 +++    GFE+ +  
Sbjct: 433 IIYDFPL------------AVSPLSKQKPDEPEW---------VERFEFYIGGFELGNAF 471

Query: 496 IRNHMSEVMLQAFS----NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
              +      + F           +          RA   G+PP GG   GIDR+ M+L 
Sbjct: 472 SELNDPSEQQRRFEMQLAERERGDDEAHQMDADYVRALGYGLPPTGGEGIGIDRLTMVLT 531

Query: 552 GAKNVREVSLFP 563
           G++++R+V LFP
Sbjct: 532 GSRSIRDVILFP 543


>gi|167947825|ref|ZP_02534899.1| aspartyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 219

 Score =  248 bits (632), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 140/212 (66%), Gaps = 1/212 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           R+H CG+L  S +   V + GWVHR R HGG+IF+D+RD  G+ QVV +PD S  F IA+
Sbjct: 2   RSHYCGELSSSHIDQEVEICGWVHRRRDHGGVIFIDLRDREGLVQVVYDPDRSEIFSIAE 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VR+E+VL + G V  R   T+N ++ TG+IE+   ++E+L+ AE  P  +       E 
Sbjct: 62  HVRNEFVLRVKGRVRPRPEGTVNPDLPTGEIEILGLELEVLNRAETPPFQLDEHENTSEE 121

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +YR++DLRR  + + I  R ++  S+R  +    F++  TP+LT ++PEGARD+LVP
Sbjct: 122 VRLRYRYVDLRRPEMLEKIRIRAQVTRSLRRFLDDRAFLDIETPMLTKATPEGARDYLVP 181

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           SR + G F+ALPQ+PQ +KQLLM SG DRY+ 
Sbjct: 182 SRTHPGQFFALPQSPQLFKQLLMMSGMDRYYT 213


>gi|254360791|ref|ZP_04976939.1| lysine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153091361|gb|EDN73335.1| lysine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 500

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 99/557 (17%), Positives = 184/557 (33%), Gaps = 115/557 (20%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            + +    V+++G +   R  G   F  I+D  G  Q+    D+    + +   S W L 
Sbjct: 56  TLKEQNIQVKVAGRIMLKRVMGKASFFTIQDVSGAIQLYVARDNLSDSVYEEKVSLWDL- 114

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G ++            TG++ +   ++++L+ +   PLP           R++ R+LD
Sbjct: 115 --GDIVGVEGALF--KTKTGELTVRCSEVQLLTKSLR-PLPDKHHGLTDLETRYRQRYLD 169

Query: 133 LRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +    +  + R+++++ +R   +  +FIE  TP+L        A+ F+         
Sbjct: 170 LISNEESRRTFMIRSQVVSGIRKFFLERDFIEVETPMLQVIPGGAAAKPFITHHNALDVD 229

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +  D++
Sbjct: 230 MY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMIEYYQAYADYHDLM 287

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           +  E +LR +  +      V               YG    D   P     + +      
Sbjct: 288 DNTEELLRQLALDILGTTDVP--------------YGDYVFDFGKPFERITMHD------ 327

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
                            AI   G G  R   D   +        GL        E     
Sbjct: 328 -----------------AIVKYGNGIQREDLDSFEKSVEI--AKGLG------IEIQKSW 362

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
           G+G V   +     E   ++          F+   P +                      
Sbjct: 363 GLGSVVNAIFEEVAEHQLIQ--------PTFLMAHPAEIS-------------------- 394

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
                     P    N+E  ++      F   +         +    +A ++D       
Sbjct: 395 ----------PLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAERFD------- 437

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
                             +      +    +      A + G+PP  G   GIDR+VM+ 
Sbjct: 438 ---------------AQVAAKDAGDDEAMFKDEDFIVALEHGLPPTAGEGLGIDRLVMIF 482

Query: 551 LGAKNVREVSLFPMSQN 567
             A ++R+V LFP  + 
Sbjct: 483 ANAPSIRDVILFPAMRQ 499


>gi|297545388|ref|YP_003677690.1| lysyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843163|gb|ADH61679.1| lysyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 499

 Score =  247 bits (631), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 104/575 (18%), Positives = 200/575 (34%), Gaps = 128/575 (22%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RT+   D+     +  G  V L+G +   R HG   F DI+D  G  Q+    D+   + 
Sbjct: 44  RTNVSSDIKNDYENFEGKVVTLAGRIMSKRTHGKASFADIQDREGRIQIYVKYDTVGEKN 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +     + +   G ++  + E   +   TG+I +     ++LS + ++ LP        
Sbjct: 104 YE----IFKILDIGDIIGFTGEVFKSK--TGEITIRVTDFKLLSKSLQI-LPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
             +R++ R+ DL     + +  +KRT+II ++R  +    F+E  TPIL T +    AR 
Sbjct: 157 PDLRYRQRYTDLIINPEVKEVFLKRTKIIKAIREFLDDRGFLEVETPILHTIAGGAAARP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + + + L+  G ++ +++   FR+E       P EF  L++
Sbjct: 217 FITHHNALDIDMY-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDVRHNP-EFTLLEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +       M  +   +F   +     +              Y   + DL  P   
Sbjct: 275 YEAYTDYYG----MMELTEQLFAYVAQKVNGTTK----------IVYQGTEIDLTPPWKR 320

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             +                                       D + E+       G+ + 
Sbjct: 321 ITMV--------------------------------------DAIKEYV------GVDFN 336

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             + DE         +AK LN+   E       M+ G+    +  +              
Sbjct: 337 EVKTDEEAIE-----IAKKLNLEAKE------GMKKGEVIALVFDE-------------- 371

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
                 ++  +  +  ++MD+P               +P    +                
Sbjct: 372 ------LVEQHLIQPTFVMDYP------------VEISPLAKRKHDNPEF---------T 404

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPP 535
            +++    G E+A+     +      + F      +E  +            A + GMPP
Sbjct: 405 SRFEAFIYGREVANAFSELNDPIDQKERFLEQLKQREAGDEEAHMMDEDFINALEVGMPP 464

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GG+  G+DR+VM +  A ++R+V LFP  +   D
Sbjct: 465 TGGLGIGVDRLVMFMTDAYSIRDVILFPTMKPKND 499


>gi|322387891|ref|ZP_08061498.1| lysine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321141164|gb|EFX36662.1| lysine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 496

 Score =  247 bits (630), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 98/565 (17%), Positives = 185/565 (32%), Gaps = 125/565 (22%)

Query: 10  GDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            +L      ++     ++G +   R  G + F  ++D  G  Q+    D+   E  +  +
Sbjct: 49  AELDKEQLHELNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +    G  +    E +  ++  G++ + A  I  LS A   PLP            +
Sbjct: 109 KADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPEKFHGLTDVETIY 161

Query: 127 KYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A    +   
Sbjct: 162 RKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHH 221

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 222 NAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYAD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E +++ V +                  DA   Y   +  L  P    ++ + 
Sbjct: 281 FQDIMDLTEGIIQHVAKAVKG--------------DAPVIYQGTEIKLNEPFKRVHMVDA 326

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
                   F +                         D   E A++        +     E
Sbjct: 327 IKEITGVDFWQ-------------------------DMTFEEAKAIAAEKKVPVEKHYTE 361

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G++     +         E +             F+ G P+                  
Sbjct: 362 VGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--------------- 392

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
                          P  + N E+++       F M +                      
Sbjct: 393 ---------------PLAKKNPEDERFTDRFELFIMTK---------------------- 415

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAA 541
               E  +     +     L  F     +KE+ ++   G       A + GMPP GG+  
Sbjct: 416 ----EYGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           GIDR+ MLL     +R+V LFP  +
Sbjct: 472 GIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|323210668|gb|EFZ95546.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
          Length = 190

 Score =  246 bits (628), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 98/188 (52%), Gaps = 1/188 (0%)

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                   R  + ++L + + + +   W++DFP +E ++ E  +   H+PFT P+    S
Sbjct: 2   VADALGALRLKLGKDLSLTDEDKWAPLWVIDFPMFE-DDGEGGLTAMHHPFTAPRDMTAS 60

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
                     A  YD+V NG+E+  G +R H  E+    F  +GI+++    +FG L  A
Sbjct: 61  ELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDA 120

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELG 588
            + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+  +PS  +   L ELG
Sbjct: 121 LKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELG 180

Query: 589 LRIVENPK 596
           +++V+  +
Sbjct: 181 IQVVKKAE 188


>gi|261492266|ref|ZP_05988829.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494487|ref|ZP_05990973.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261309871|gb|EEY11088.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261312045|gb|EEY13185.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 500

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 98/557 (17%), Positives = 183/557 (32%), Gaps = 115/557 (20%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            + +    V+++G +   R  G   F  I+D  G  Q+    D+    + +   S W L 
Sbjct: 56  TLKEQNIQVKVAGRIMLKRVMGKASFFTIQDVSGAIQLYVARDNLSDSVYEEKVSLWDL- 114

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G ++            TG++ +   ++++L+ +   PLP           R++ R+LD
Sbjct: 115 --GDIVGVEGALF--KTKTGELTVRCSEVQLLTKSLR-PLPDKHHGLTDLETRYRQRYLD 169

Query: 133 LRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +    +  + R+++++ +R   +  +FIE  TP+L        A+ F+         
Sbjct: 170 LISNEESRRTFMIRSQVVSGIRKFFLERDFIEVETPMLQVIPGGAAAKPFITHHNALDVD 229

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +  D++
Sbjct: 230 MY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMIEYYQAYADYHDLM 287

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           +  E +LR +  +      V               YG    D   P     + +      
Sbjct: 288 DNTEELLRQLALDILGTTDVP--------------YGDYVFDFGKPFERITMHD------ 327

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
                            AI   G G  R   D   +        GL        E     
Sbjct: 328 -----------------AIVKYGNGIQREDLDSFEKSVEI--AKGLG------IEIQKSW 362

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
           G+G V   +     E   ++          F+   P +                      
Sbjct: 363 GLGSVVNAIFEEVAEHQLIQ--------PTFLMAHPAEIS-------------------- 394

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
                     P    N+E  ++      F   +         +    +A ++D       
Sbjct: 395 ----------PLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAERFD------- 437

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
                             +      +    +      A + G+PP  G   GIDR+ M+ 
Sbjct: 438 ---------------AQVAAKDAGDDEAMFKDEDFIVALEHGLPPTAGEGLGIDRLAMIF 482

Query: 551 LGAKNVREVSLFPMSQN 567
             A ++R+V LFP  + 
Sbjct: 483 ANAPSIRDVILFPAMRQ 499


>gi|322374407|ref|ZP_08048921.1| lysine--tRNA ligase [Streptococcus sp. C300]
 gi|321279907|gb|EFX56946.1| lysine--tRNA ligase [Streptococcus sp. C300]
          Length = 496

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 96/565 (16%), Positives = 184/565 (32%), Gaps = 125/565 (22%)

Query: 10  GDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            +L      ++     ++G +   R  G + F  ++D  G  Q+    D    E  +  +
Sbjct: 49  AELDKEQLHELNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +    G  +    E +  ++  G++ + A  I  LS A   PLP            +
Sbjct: 109 KADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPEKFHGLTDVETIY 161

Query: 127 KYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A    +   
Sbjct: 162 RKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHH 221

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 222 NAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYAD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E +++   +       V+     I  ++  +R           + M +  + 
Sbjct: 281 FQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFKR-----------VHMVDAIKE 329

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
               +F                              D   E A++        +     E
Sbjct: 330 ITGVDFWQ----------------------------DMTFEEAKAIAAEKKVPVEKHYTE 361

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G++     +         E +             F+ G P+                  
Sbjct: 362 VGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--------------- 392

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
                          P  + N E+ +       F M +                      
Sbjct: 393 ---------------PLAKKNPEDNRFTDRFELFIMTK---------------------- 415

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAA 541
               E  +     +     L  F     +KE+ ++   G       A + GMPP GG+  
Sbjct: 416 ----EYGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           GIDR+ MLL     +R+V LFP  +
Sbjct: 472 GIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|331266480|ref|YP_004326110.1| lysyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326683152|emb|CBZ00770.1| lysyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 496

 Score =  245 bits (626), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 97/565 (17%), Positives = 185/565 (32%), Gaps = 125/565 (22%)

Query: 10  GDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            +L      D+     ++G +   R  G + F  ++D  G  Q+    D    E  +  +
Sbjct: 49  AELDKEQLHDLNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +    G  +    E +  ++  G++ + A  I  LS A   PLP            +
Sbjct: 109 KADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPEKFHGLTDVETIY 161

Query: 127 KYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A    +   
Sbjct: 162 RKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHH 221

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 222 NAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYAD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E +++   +       V+     I  ++  +R           + M +  + 
Sbjct: 281 FQDIMDLTEGIIQHAAKAVKGDGPVNYQGTEIKINEPFKR-----------VHMVDAIKE 329

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
               +F                              D   E A++        +     E
Sbjct: 330 ITGVDFWQ----------------------------DMTFEEAKAIAAEKKVPVEKHYTE 361

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G++     +         E +             F+ G P+                  
Sbjct: 362 VGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--------------- 392

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
                          P  + N E+++       F M +                      
Sbjct: 393 ---------------PLAKKNPEDERFTDRFELFIMTK---------------------- 415

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAA 541
               E  +     +     L  F     +KE+ ++   G       A + GMPP GG+  
Sbjct: 416 ----EYGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           GIDR+ MLL     +R+V LFP  +
Sbjct: 472 GIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|289168135|ref|YP_003446404.1| Lysyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288907702|emb|CBJ22539.1| Lysyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 496

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 98/577 (16%), Positives = 185/577 (32%), Gaps = 132/577 (22%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L           + D      ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSQELKNKYADFDKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +
Sbjct: 150 KFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E +++   +                       Y   +  +
Sbjct: 269 FTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGP--------------VNYQGTEIKI 314

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
             P    ++ E         F +                         D   E A++   
Sbjct: 315 NEPFKRVHMVEAIKEITGVDFWQ-------------------------DMTFEEAKAIAA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                +     E G++     +         E +             F+ G P+      
Sbjct: 350 EKKVPVEKHYTEVGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--- 392

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                                      P  + N E+++       F M +          
Sbjct: 393 ---------------------------PLAKKNPEDQRFTDRFELFIMTK---------- 415

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAF 529
                           E  +     +     L  F     +KE+ ++   G       A 
Sbjct: 416 ----------------EYGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEAL 459

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 460 EYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|148994403|ref|ZP_01823626.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168488382|ref|ZP_02712581.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147927239|gb|EDK78273.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183572998|gb|EDT93526.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332074509|gb|EGI84985.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 496

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 96/577 (16%), Positives = 188/577 (32%), Gaps = 132/577 (22%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L           + D      ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSQELKDKYANLDKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +
Sbjct: 150 KFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E +++   +                       Y + +  +
Sbjct: 269 FTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGP--------------VNYQSTEIKI 314

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
             P    ++ +         F + +++                         E A++   
Sbjct: 315 NEPFKRVHMVDAIREITGVDFWQDMTL-------------------------EEAKAIAA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                +     E G++     +         E +             F+ G P+      
Sbjct: 350 EKKVPVEKHYTEVGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--- 392

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                                      P  + N E+++       F M +          
Sbjct: 393 ---------------------------PLAKKNPEDQRFTDRFELFIMTK---------- 415

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAF 529
                           E  +     +     L  F     +KE+ ++   G       A 
Sbjct: 416 ----------------EYGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEAL 459

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 460 EYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|255964979|ref|NP_345214.3| lysyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|14972186|gb|AAK74854.1| lysyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
          Length = 491

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 95/577 (16%), Positives = 186/577 (32%), Gaps = 132/577 (22%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L           + D      ++G +   R  G + F  ++D  G  Q+    
Sbjct: 32  RTANSQELKDKYANLDKEQLHDKNETATIAGRLITKRGKGKVGFAHLQDREGQIQIYVRK 91

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 92  DAVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 144

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +
Sbjct: 145 KFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEA 204

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 205 GGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 263

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E +++   +                       Y   +  +
Sbjct: 264 FTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGP--------------VNYQGTEIKI 309

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
             P    ++ +         F + +++                         E A++   
Sbjct: 310 NEPFKRVHMVDAIREITGVDFWQDMTL-------------------------EEAKAIAA 344

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                +     E G++     +         E +             F+ G P+      
Sbjct: 345 EKKVPVEKHYTEVGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--- 387

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                                      P  + N E+++       F M +          
Sbjct: 388 ---------------------------PLAKKNPEDQRFTDRFELFIMTKE--------- 411

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAF 529
                              +     +     L  F     +KE+ ++   G       A 
Sbjct: 412 -----------------YGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEAL 454

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 455 EYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 491


>gi|315613067|ref|ZP_07887978.1| lysine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315177|gb|EFU63218.1| lysine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 496

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 93/565 (16%), Positives = 179/565 (31%), Gaps = 125/565 (22%)

Query: 10  GDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            +L      ++     ++G +   R  G + F  ++D  G  Q+    D    E  +  +
Sbjct: 49  AELDKEQLHELNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +    G  +    E +  ++  G++ + A  I  LS A   PLP            +
Sbjct: 109 KADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPEKFHGLTDVETIY 161

Query: 127 KYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A    +   
Sbjct: 162 RKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHH 221

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 222 NAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYAD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E +++   +                       Y   +  +  P    ++ + 
Sbjct: 281 FQDIMDLTEGIIQHAAKAVKGDGP--------------VNYQGTEIKINEPFKRVHMVDA 326

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
                   F +                         D   E A++        +     E
Sbjct: 327 IKGITGVDFWQ-------------------------DMTFEEAKAIAAEKKVPVEKHYTE 361

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G++     +         E +             F+ G P+                  
Sbjct: 362 VGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--------------- 392

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
                          P  + N E+ +       F M +                      
Sbjct: 393 ---------------PLAKKNPEDDRFTDRFELFIMTKE--------------------- 416

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAA 541
                  +     +     L  F     +KE+ ++   G       A + GMPP GG+  
Sbjct: 417 -----YGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           GIDR+ MLL     +R+V LFP  +
Sbjct: 472 GIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|307706787|ref|ZP_07643592.1| lysyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617872|gb|EFN97034.1| lysyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 496

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 94/565 (16%), Positives = 182/565 (32%), Gaps = 125/565 (22%)

Query: 10  GDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            DL      D      ++G +   R  G + F  ++D  G  Q+    D+   E  +  +
Sbjct: 49  ADLDKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +    G  +    E +  ++  G++ + A  I  LS A   PLP            +
Sbjct: 109 KADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPEKFHGLTDVETIY 161

Query: 127 KYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A    +   
Sbjct: 162 RKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHH 221

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 222 NAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYAD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E +++   +                       Y   +  +  P    ++ + 
Sbjct: 281 FQDIMDLTEGIIQHAAKAVKGDGP--------------VNYQGTEIKINEPFKRVHMVDA 326

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
                   F + +++                         E A++        +     E
Sbjct: 327 IKEITGVDFWQDMTL-------------------------EEAKAIAAEKKVPVEKHYTE 361

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G++     +         E +             F+ G P+                  
Sbjct: 362 VGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--------------- 392

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
                          P  + N E+++       F M +                      
Sbjct: 393 ---------------PLAKKNPEDQRFTDRFELFIMTKE--------------------- 416

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAA 541
                  +     +     L  F     +KE+ ++   G       A + GMPP GG+  
Sbjct: 417 -----YGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           GIDR+ MLL     +R+V LFP  +
Sbjct: 472 GIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|111656835|ref|ZP_01407683.1| hypothetical protein SpneT_02001903 [Streptococcus pneumoniae
           TIGR4]
 gi|149020353|ref|ZP_01835245.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168492226|ref|ZP_02716369.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|168492864|ref|ZP_02717007.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|39932232|sp|Q97RS9|SYK_STRPN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|147930655|gb|EDK81637.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|183573509|gb|EDT94037.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183576861|gb|EDT97389.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|332075995|gb|EGI86461.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 496

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 95/577 (16%), Positives = 186/577 (32%), Gaps = 132/577 (22%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L           + D      ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSQELKDKYANLDKEQLHDKNETATIAGRLITKRGKGKVGFAHLQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +
Sbjct: 150 KFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E +++   +                       Y   +  +
Sbjct: 269 FTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGP--------------VNYQGTEIKI 314

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
             P    ++ +         F + +++                         E A++   
Sbjct: 315 NEPFKRVHMVDAIREITGVDFWQDMTL-------------------------EEAKAIAA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                +     E G++     +         E +             F+ G P+      
Sbjct: 350 EKKVPVEKHYTEVGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--- 392

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                                      P  + N E+++       F M +          
Sbjct: 393 ---------------------------PLAKKNPEDQRFTDRFELFIMTKE--------- 416

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAF 529
                              +     +     L  F     +KE+ ++   G       A 
Sbjct: 417 -----------------YGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEAL 459

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 460 EYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|182683632|ref|YP_001835379.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|238691143|sp|B2IN95|SYK_STRPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|182628966|gb|ACB89914.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
          Length = 496

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 95/577 (16%), Positives = 186/577 (32%), Gaps = 132/577 (22%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L           + D      ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSQELKDKYANLDKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +
Sbjct: 150 KFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E +++   +                       Y   +  +
Sbjct: 269 FTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGP--------------VNYQGTEIKI 314

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
             P    ++ +         F + +++                         E A++   
Sbjct: 315 NKPFKRVHMVDAIKEITGVDFWQDMTL-------------------------EEAKAIAA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                +     E G++     +         E +             F+ G P+      
Sbjct: 350 EKKVPVEKHYTEVGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--- 392

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                                      P  + N E+++       F M +          
Sbjct: 393 ---------------------------PLAKKNPEDQRFTDRFELFIMTKE--------- 416

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAF 529
                              +     +     L  F     +KE+ ++   G       A 
Sbjct: 417 -----------------YGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEAL 459

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 460 EYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|15902670|ref|NP_358220.1| lysyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116517090|ref|YP_816116.1| lysyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|148985286|ref|ZP_01818509.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|149005821|ref|ZP_01829560.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|168482937|ref|ZP_02707889.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|168486793|ref|ZP_02711301.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|194397421|ref|YP_002037362.1| lysyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|225858528|ref|YP_002740038.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|307126899|ref|YP_003878930.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|39932186|sp|Q8CWS5|SYK_STRR6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|122278998|sp|Q04LI2|SYK_STRP2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710930|sp|B5E317|SYK_STRP4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|15458210|gb|AAK99430.1| Lysyl-tRNA synthetase (lysine--tRNA ligase) (LYSRS) [Streptococcus
           pneumoniae R6]
 gi|116077666|gb|ABJ55386.1| lysyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|147762761|gb|EDK69721.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147922484|gb|EDK73603.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|172043813|gb|EDT51859.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|183570273|gb|EDT90801.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|194357088|gb|ACF55536.1| lysyl-tRNA synthetase (classII) [Streptococcus pneumoniae G54]
 gi|225721906|gb|ACO17760.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|301799737|emb|CBW32303.1| lysyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
 gi|301801566|emb|CBW34262.1| lysyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|306483961|gb|ADM90830.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|332077129|gb|EGI87591.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
 gi|332202581|gb|EGJ16650.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
 gi|332203870|gb|EGJ17937.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 496

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 95/577 (16%), Positives = 186/577 (32%), Gaps = 132/577 (22%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L           + D      ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSQELKDKYANLDKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +
Sbjct: 150 KFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E +++   +                       Y   +  +
Sbjct: 269 FTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGP--------------VNYQGTEIKI 314

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
             P    ++ +         F + +++                         E A++   
Sbjct: 315 NEPFKRVHMVDAIREITGVDFWQDMTL-------------------------EEAKAIAA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                +     E G++     +         E +             F+ G P+      
Sbjct: 350 EKKVPVEKHYTEVGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--- 392

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                                      P  + N E+++       F M +          
Sbjct: 393 ---------------------------PLAKKNPEDQRFTDRFELFIMTKE--------- 416

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAF 529
                              +     +     L  F     +KE+ ++   G       A 
Sbjct: 417 -----------------YGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEAL 459

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 460 EYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|301793881|emb|CBW36276.1| lysyl-tRNA synthetase [Streptococcus pneumoniae INV104]
 gi|332204726|gb|EGJ18791.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 496

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 95/577 (16%), Positives = 186/577 (32%), Gaps = 132/577 (22%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L           + D      ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSQELKDKYANLDKEQLHDKNETATIAGRLITKRGKGKVGFAHLQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +
Sbjct: 150 KFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E +++   +                       Y   +  +
Sbjct: 269 FTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGP--------------VNYQGTEIKI 314

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
             P    ++ +         F + +++                         E A++   
Sbjct: 315 NEPFKRVHMVDAIREITGVDFWQDMTL-------------------------EEAKTIAA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                +     E G++     +         E +             F+ G P+      
Sbjct: 350 EKKVPVEKHYTEVGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--- 392

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                                      P  + N E+++       F M +          
Sbjct: 393 ---------------------------PLAKKNPEDQRFTDRFELFIMTKE--------- 416

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAF 529
                              +     +     L  F     +KE+ ++   G       A 
Sbjct: 417 -----------------YGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEAL 459

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 460 EYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|148989077|ref|ZP_01820477.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|221231516|ref|YP_002510668.1| lysyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225854225|ref|YP_002735737.1| lysyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|147925574|gb|EDK76651.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|220673976|emb|CAR68486.1| lysyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225722991|gb|ACO18844.1| lysyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 496

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 95/577 (16%), Positives = 186/577 (32%), Gaps = 132/577 (22%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L           + D      ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSQELKDKYTNLDKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +
Sbjct: 150 KFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E +++   +                       Y   +  +
Sbjct: 269 FTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGP--------------VNYQGTEIKI 314

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
             P    ++ +         F + +++                         E A++   
Sbjct: 315 NEPFKRVHMVDAIREITGVDFWQDMTL-------------------------EEAKAIAA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                +     E G++     +         E +             F+ G P+      
Sbjct: 350 EKKVPVEKHYTEVGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--- 392

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                                      P  + N E+++       F M +          
Sbjct: 393 ---------------------------PLAKKNPEDQRFTDRFELFIMTKE--------- 416

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAF 529
                              +     +     L  F     +KE+ ++   G       A 
Sbjct: 417 -----------------YGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEAL 459

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 460 EYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|148997215|ref|ZP_01824869.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168575371|ref|ZP_02721307.1| lysyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307067319|ref|YP_003876285.1| Lysyl-tRNA synthetase (class II) [Streptococcus pneumoniae AP200]
 gi|147756915|gb|EDK63955.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|183578679|gb|EDT99207.1| lysyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306408856|gb|ADM84283.1| Lysyl-tRNA synthetase (class II) [Streptococcus pneumoniae AP200]
          Length = 496

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 95/577 (16%), Positives = 185/577 (32%), Gaps = 132/577 (22%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L           + D      ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSQELKDKYANLDKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +
Sbjct: 150 KFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E +++   +                       Y   +  +
Sbjct: 269 FTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGP--------------VNYQGTEIKI 314

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
             P    ++ +         F + +++                         E A+    
Sbjct: 315 NEPFKRVHMVDAIREITGVDFWQDMTL-------------------------EEAKVIAA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                +     E G++     +         E +             F+ G P+      
Sbjct: 350 EKKVPVEKHYTEVGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--- 392

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                                      P  + N E+++       F M +          
Sbjct: 393 ---------------------------PLAKKNPEDQRFTDRFELFIMTKE--------- 416

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAF 529
                              +     +     L  F     +KE+ ++   G       A 
Sbjct: 417 -----------------YGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEAL 459

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 460 EYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|307709178|ref|ZP_07645637.1| lysyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307620124|gb|EFN99241.1| lysyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 496

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 94/565 (16%), Positives = 182/565 (32%), Gaps = 125/565 (22%)

Query: 10  GDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            DL      D      ++G +   R  G + F  ++D  G  Q+    D+   E  +  +
Sbjct: 49  ADLDKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +    G  +    E +  ++  G++ + A  I  LS A   PLP            +
Sbjct: 109 KADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPEKFHGLTDVETIY 161

Query: 127 KYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A    +   
Sbjct: 162 RKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHH 221

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 222 NAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYAD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E +++   +                       Y   +  +  P    ++ + 
Sbjct: 281 FQDIMDLTEGIIQHAAKSVKGDGP--------------VNYQGTEIKINEPFKRVHMVDA 326

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
                   F + +++                         E A++        +     E
Sbjct: 327 IKEITGVDFWQDMTL-------------------------EEAKAIAAEKKVPVEKHYTE 361

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G++     +         E +             F+ G P+                  
Sbjct: 362 VGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--------------- 392

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
                          P  + N E+++       F M +                      
Sbjct: 393 ---------------PLAKKNPEDQRFTDRFELFIMTKE--------------------- 416

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAA 541
                  +     +     L  F     +KE+ ++   G       A + GMPP GG+  
Sbjct: 417 -----YGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           GIDR+ MLL     +R+V LFP  +
Sbjct: 472 GIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|149010667|ref|ZP_01832038.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|303255869|ref|ZP_07341910.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303259976|ref|ZP_07345950.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303261382|ref|ZP_07347330.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303264049|ref|ZP_07349970.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303266941|ref|ZP_07352817.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269235|ref|ZP_07355011.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|147765148|gb|EDK72077.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|302597253|gb|EFL64358.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302637516|gb|EFL68003.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302638895|gb|EFL69356.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302641242|gb|EFL71613.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643515|gb|EFL73786.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302646454|gb|EFL76680.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 496

 Score =  244 bits (624), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 95/577 (16%), Positives = 186/577 (32%), Gaps = 132/577 (22%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L           + D      ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSQELKDKYANLDKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +
Sbjct: 150 KFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E +++   +                       Y   +  +
Sbjct: 269 FTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGP--------------VNYQGTEIKI 314

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
             P    ++ +         F + +++                         E A++   
Sbjct: 315 NKPFKRVHMVDAIREITGVDFWQDMTL-------------------------EEAKAIAA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                +     E G++     +         E +             F+ G P+      
Sbjct: 350 EKKVPVEKHYTEVGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--- 392

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                                      P  + N E+++       F M +          
Sbjct: 393 ---------------------------PLAKKNPEDQRFTDRFELFIMTKE--------- 416

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAF 529
                              +     +     L  F     +KE+ ++   G       A 
Sbjct: 417 -----------------YGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEAL 459

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 460 EYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|149003320|ref|ZP_01828209.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|237650050|ref|ZP_04524302.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237822721|ref|ZP_04598566.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|147758503|gb|EDK65501.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 496

 Score =  244 bits (624), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 95/577 (16%), Positives = 186/577 (32%), Gaps = 132/577 (22%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L           + D      ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSQELKDKYANLDKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +
Sbjct: 150 KFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E +++   +                       Y   +  +
Sbjct: 269 FTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGP--------------VNYQGTEIKI 314

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
             P    ++ +         F + +++                         E A++   
Sbjct: 315 NEPFKRVHMVDAIREITGVDFWQDMTL-------------------------EEAKTIAA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                +     E G++     +         E +             F+ G P+      
Sbjct: 350 EKKVPVEKHYTEVGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--- 392

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                                      P  + N E+++       F M +          
Sbjct: 393 ---------------------------PLAKKNPEDQRFTDRFELFIMTKE--------- 416

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAF 529
                              +     +     L  F     +KE+ ++   G       A 
Sbjct: 417 -----------------YGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEAL 459

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 460 EYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|32035006|ref|ZP_00135078.1| COG1190: Lysyl-tRNA synthetase (class II) [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208285|ref|YP_001053510.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|165976226|ref|YP_001651819.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|303251193|ref|ZP_07337372.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|303252272|ref|ZP_07338438.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247791|ref|ZP_07529828.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307250030|ref|ZP_07531998.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307252383|ref|ZP_07534280.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307254631|ref|ZP_07536462.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307256857|ref|ZP_07538635.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|307259082|ref|ZP_07540812.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|189082343|sp|A3N0G9|SYK_ACTP2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710880|sp|B0BP90|SYK_ACTPJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|126097077|gb|ABN73905.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
 gi|165876327|gb|ABY69375.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|302648731|gb|EFL78921.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|302649927|gb|EFL80104.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306855734|gb|EFM87900.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306857952|gb|EFM90040.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306860305|gb|EFM92321.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306862426|gb|EFM94389.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306864591|gb|EFM96496.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306866749|gb|EFM98607.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
          Length = 500

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 102/558 (18%), Positives = 188/558 (33%), Gaps = 117/558 (20%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L   D+   V+++G +   R  G   F  I+D  G  Q+    D+    +     S W L
Sbjct: 57  LKEQDI--QVKVAGRIMLKRVMGKASFFTIQDVSGQIQLYVARDNLAEGVYADKVSMWDL 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++  +         TG++ +   ++E+L+ +   PLP   +    +  R++ R+L
Sbjct: 115 ---GDIVGVAGTLF--KTKTGELTVRCSEVELLTKSLR-PLPNKVQGLTDQETRYRQRYL 168

Query: 132 DLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +    +  + R+++++ +R   + ++FIE  TP+L        A+ F+        
Sbjct: 169 DLISNEESRRTFMIRSKVVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDV 228

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +  D+
Sbjct: 229 DMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMIEYYQAYADYHDL 286

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++  E +LR +  +     TV               YG    D   P     + +     
Sbjct: 287 MDNTEELLRKLAIDILGTTTVP--------------YGEYVFDFGKPFERITMHD----- 327

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
                             AI   G G  R   D   +        GL        E    
Sbjct: 328 ------------------AIVKYGNGITREDLDSFEKSVEI--AKGLG------IEIQKS 361

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
            G+G V   +     E   ++          F+   P +                     
Sbjct: 362 WGLGSVVNAIFEEVAEHQLIQ--------PTFLMAHPAEIS------------------- 394

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
                      P    N+E  ++      F   +         +    +A ++D      
Sbjct: 395 -----------PLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAERFD------ 437

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
                              +      +    +      A + G+PP  G   GIDR+ M+
Sbjct: 438 ----------------AQVAAKDAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMI 481

Query: 550 LLGAKNVREVSLFPMSQN 567
              A ++R+V LFP  + 
Sbjct: 482 FANAPSIRDVILFPAMRQ 499


>gi|293365298|ref|ZP_06612015.1| lysine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307703838|ref|ZP_07640779.1| lysyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291316748|gb|EFE57184.1| lysine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307622673|gb|EFO01669.1| lysyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 496

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 96/565 (16%), Positives = 185/565 (32%), Gaps = 125/565 (22%)

Query: 10  GDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            +L      ++     ++G +   R  G + F  ++D  G  Q+    D    E  +  +
Sbjct: 49  AELDKEQLHELNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +    G  +    E +  ++  G++ + A  I  LS A   PLP            +
Sbjct: 109 KADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPEKFHGLTDVETIY 161

Query: 127 KYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A    +   
Sbjct: 162 RKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHH 221

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 222 NAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYAD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E +++   +       V+     I  ++  +R           + M +  + 
Sbjct: 281 FQDIMDLTEGIIQHAAKAVKGDGPVNYQGTEIKINEPFKR-----------VHMVDAIKE 329

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
               +F                              D   E A++        +     E
Sbjct: 330 ITGVDFWQ----------------------------DMTFEEAKAIAAEKKVPVEKHYTE 361

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G++     +         E +             F+ G P+                  
Sbjct: 362 VGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--------------- 392

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
                          P  + N E+++       F M +                      
Sbjct: 393 ---------------PLAKKNPEDERFTDRFELFIMTK---------------------- 415

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAA 541
               E  +     +     L  F     +KE+ ++   G       A + GMPP GG+  
Sbjct: 416 ----EYGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           GIDR+ MLL     +R+V LFP  +
Sbjct: 472 GIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|307245669|ref|ZP_07527755.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306853371|gb|EFM85590.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
          Length = 500

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 102/558 (18%), Positives = 188/558 (33%), Gaps = 117/558 (20%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L   D+   V+++G +   R  G   F  I+D  G  Q+    D+    +     S W L
Sbjct: 57  LKEQDI--QVKVAGRIMLKRVMGKASFFTIQDVSGQIQLYVARDNLAEGVYADKVSMWDL 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++  +         TG++ +   ++E+L+ +   PLP   +    +  R++ R+L
Sbjct: 115 ---GDIVGVAGTLF--KTKTGELTVRCSEVELLTKSLR-PLPNKVQGLTDQETRYRQRYL 168

Query: 132 DLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +    +  + R+++++ +R   + ++FIE  TP+L        A+ F+        
Sbjct: 169 DLISNEESRRTFMIRSKVVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFVTHHNALDV 228

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +  D+
Sbjct: 229 DMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMIEYYQAYADYHDL 286

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++  E +LR +  +     TV               YG    D   P     + +     
Sbjct: 287 MDNTEELLRKLAIDILGTTTVP--------------YGEYVFDFGKPFERITMHD----- 327

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
                             AI   G G  R   D   +        GL        E    
Sbjct: 328 ------------------AIVKYGNGITREDLDSFEKSVEI--AKGLG------IEIQKS 361

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
            G+G V   +     E   ++          F+   P +                     
Sbjct: 362 WGLGSVVNAIFEEVAEHQLIQ--------PTFLMAHPAEIS------------------- 394

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
                      P    N+E  ++      F   +         +    +A ++D      
Sbjct: 395 -----------PLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAERFD------ 437

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
                              +      +    +      A + G+PP  G   GIDR+ M+
Sbjct: 438 ----------------AQVAAKDAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMI 481

Query: 550 LLGAKNVREVSLFPMSQN 567
              A ++R+V LFP  + 
Sbjct: 482 FANAPSIRDVILFPAMRQ 499


>gi|270292827|ref|ZP_06199038.1| lysine--tRNA ligase [Streptococcus sp. M143]
 gi|270278806|gb|EFA24652.1| lysine--tRNA ligase [Streptococcus sp. M143]
          Length = 496

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 96/565 (16%), Positives = 185/565 (32%), Gaps = 125/565 (22%)

Query: 10  GDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            +L      ++     ++G +   R  G + F  ++D  G  Q+    D    E  +  +
Sbjct: 49  AELDKEQLHELNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDEVGEENYEIFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +    G  +    E +  ++  G++ + A  I  LS A   PLP            +
Sbjct: 109 KADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPEKFHGLTDVETIY 161

Query: 127 KYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A    +   
Sbjct: 162 RKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHH 221

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 222 NAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYAD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E +++   +       V+     I  ++  +R           + M +  + 
Sbjct: 281 FQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFKR-----------VHMVDAIKE 329

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
               +F                              D   E A++        +     E
Sbjct: 330 ITGVDFWQ----------------------------DMTFEEAKAIAAEKKVPVEKHYTE 361

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G++     +         E +             F+ G P+                  
Sbjct: 362 VGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--------------- 392

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
                          P  + N E+++       F M +                      
Sbjct: 393 ---------------PLAKKNPEDERFTDRFELFIMTK---------------------- 415

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAA 541
               E  +     +     L  F     +KE+ ++   G       A + GMPP GG+  
Sbjct: 416 ----EYGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGI 471

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           GIDR+ MLL     +R+V LFP  +
Sbjct: 472 GIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|307261289|ref|ZP_07542964.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|306869020|gb|EFN00822.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
          Length = 500

 Score =  244 bits (623), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 103/558 (18%), Positives = 189/558 (33%), Gaps = 117/558 (20%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L   D+   V+++G +   R  G   F  I+D  G  Q+ A  D+    +     S W L
Sbjct: 57  LKEQDI--QVKVAGRIMLKRVMGKASFFTIQDVSGQIQLYAARDNLAEGVYADKVSMWDL 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++  +         TG++ +   ++E+L+ +   PLP   +    +  R++ R+L
Sbjct: 115 ---GDIVGVAGTLF--KTKTGELTVRCSEVELLTKSLR-PLPNKVQGLTDQETRYRQRYL 168

Query: 132 DLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +    +  + R+++++ +R   + ++FIE  TP+L        A+ F+        
Sbjct: 169 DLISNEESRRTFMIRSKVVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDV 228

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +  D+
Sbjct: 229 DMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMIEYYQAYADYHDL 286

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++  E +LR +  +     TV               YG    D   P     + +     
Sbjct: 287 MDNTEELLRKLAIDILGTTTVP--------------YGEYVFDFGKPFERITMHD----- 327

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
                             AI   G G  R   D   +        GL        E    
Sbjct: 328 ------------------AIVKYGNGITREDLDSFEKSVEI--AKGLG------IEIQKS 361

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
            G+G V   +     E   ++          F+   P +                     
Sbjct: 362 WGLGSVVNAIFEEVAEHQLIQ--------PTFLMAHPAEIS------------------- 394

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
                      P    N+E  ++      F   +         +    +A ++D      
Sbjct: 395 -----------PLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAERFD------ 437

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
                              +      +    +      A + G+PP  G   GIDR+ M+
Sbjct: 438 ----------------AQVAAKDAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMI 481

Query: 550 LLGAKNVREVSLFPMSQN 567
              A ++R+V LFP  + 
Sbjct: 482 FANAPSIRDVILFPAMRQ 499


>gi|322514329|ref|ZP_08067382.1| lysine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322119783|gb|EFX91817.1| lysine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 500

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 103/558 (18%), Positives = 189/558 (33%), Gaps = 117/558 (20%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L   D+   V+++G +   R  G   F  I+D  G  Q+    D+    +     S W L
Sbjct: 57  LKEQDI--QVKVAGRIMLKRVMGKASFFTIQDVSGQIQLYVARDNLAEGVYADKVSMWDL 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++  +         TG++ +   ++E+L+ +   PLP   +    +  R++ R+L
Sbjct: 115 ---GDIVGVAGTLF--KTKTGELTVRCSEVELLTKSLR-PLPNKVQGLTDQETRYRQRYL 168

Query: 132 DLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +    +  + R+++++ +R   + ++FIE  TP+L        A+ F+    V   
Sbjct: 169 DLISNEESRRTFMIRSKVVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNVLDV 228

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +  D+
Sbjct: 229 DMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMIEYYQAYADYHDL 286

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++  E +LR +  +     TV               YG    D   P     + +     
Sbjct: 287 MDNTEELLRKLAIDILGTTTVP--------------YGEYVFDFGKPFERITMHD----- 327

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
                             AI   G G  R   D   +        GL        E    
Sbjct: 328 ------------------AIVKYGNGITREDLDSFEKSVEI--AKGLG------IEIQKP 361

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
            G+G V   +     E   ++          F+   P +                     
Sbjct: 362 WGLGSVVNAIFEEVAEHQLIQ--------PTFLMAHPAEIS------------------- 394

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
                      P    N+E  ++      F   +         +    +A ++D      
Sbjct: 395 -----------PLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAERFD------ 437

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
                              +      +    +      A + G+PP  G   GIDR+ M+
Sbjct: 438 ----------------AQVAAKDAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMI 481

Query: 550 LLGAKNVREVSLFPMSQN 567
              A ++R+V LFP  + 
Sbjct: 482 FANAPSIRDVILFPAMRQ 499


>gi|306829416|ref|ZP_07462606.1| lysine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304428502|gb|EFM31592.1| lysine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 496

 Score =  244 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 100/568 (17%), Positives = 186/568 (32%), Gaps = 131/568 (23%)

Query: 10  GDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAK 63
            +L      ++     ++G +   R  G + F  ++D  G  Q+    D      +EI K
Sbjct: 49  AELDKEQLHELNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDEVGEQNYEIFK 108

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
                  L ++G VM             G++ + A  I  LS A   PLP          
Sbjct: 109 KADLGDFLGVEGEVMRTD---------MGELSIKATHITHLSKALR-PLPEKFHGLTDVE 158

Query: 124 IRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A    +
Sbjct: 159 TIYRKRYLDLISNRESFDRFVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFI 218

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  +
Sbjct: 219 THHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQA 277

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           + +  DI++  E++++   +       V+     I  ++  +R           + M + 
Sbjct: 278 YADFQDIMDLTEDIIQHAAKSVKGDGPVNYQGTEIKINEPFKR-----------VHMVDA 326

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     +F                              D   E A++        +   
Sbjct: 327 IKEITGVDFWQ----------------------------DMTFEEAKAIAAEKKVPVEKH 358

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
             E G++     +         E +             F+ G P+               
Sbjct: 359 YTEVGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS------------ 392

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
                             P  + N E+++       F M +                   
Sbjct: 393 ------------------PLAKKNPEDERFTDRFELFIMTK------------------- 415

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGG 538
                  E  +     +     L  F     +KE+ ++   G       A + GMPP GG
Sbjct: 416 -------EYGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGG 468

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +  GIDR+ MLL     +R+V LFP  +
Sbjct: 469 LGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|322391976|ref|ZP_08065440.1| lysine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321145202|gb|EFX40599.1| lysine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 496

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 95/561 (16%), Positives = 179/561 (31%), Gaps = 117/561 (20%)

Query: 10  GDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            DL      ++     ++G +   R  G + F  ++D  G  Q+    D+   E  +  +
Sbjct: 49  ADLDKEQLHELNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +    G  +    E +  ++  G++ + A  I  LS A   PLP            +
Sbjct: 109 KSDL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPEKFHGLTDVETIY 161

Query: 127 KYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A    +   
Sbjct: 162 RKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHH 221

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 222 NAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYAD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E +++ V +                       Y   +  L  P    ++ + 
Sbjct: 281 FHDIMDLTEGIIQHVAKAVKGDGP--------------VIYQGTEIKLNEPFKRVHMVDA 326

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
                   F K                         D   E A++        +     E
Sbjct: 327 IKEITGVDFWK-------------------------DMTFEEAKAIASEKKVPVEKHFTE 361

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G++     +         E +             F+ G P+                  
Sbjct: 362 FGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--------------- 392

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
                          P  + N E+ +       F M +                  +   
Sbjct: 393 ---------------PLAKKNPEDPRFTDRFELFIMTKE-------------YGNAF--- 421

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
               E+     +    E   +A          ++        A + GMPP GG+  GIDR
Sbjct: 422 ---TELNDPIDQLSRFEAQAKAKELGDDEATGID---YDYIEALEYGMPPTGGLGIGIDR 475

Query: 546 IVMLLLGAKNVREVSLFPMSQ 566
           + MLL     +R+V LFP  +
Sbjct: 476 LCMLLTDTTTIRDVLLFPTMK 496


>gi|225860691|ref|YP_002742200.1| lysyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229273|ref|ZP_06962954.1| lysyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254528|ref|ZP_06978114.1| lysyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502499|ref|YP_003724439.1| lysyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|225727166|gb|ACO23017.1| lysyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238094|gb|ADI69225.1| lysyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|327390248|gb|EGE88590.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 496

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 98/577 (16%), Positives = 186/577 (32%), Gaps = 132/577 (22%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L           + D      ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSQELKDKYANLDKEQLHDKNETATIAGRLITKRGKGKVGFAHLQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +
Sbjct: 150 KFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E +++   +       V+     I  +           +L
Sbjct: 269 FTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKIN-----------EL 317

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
              + M +        +F                              D   E A++   
Sbjct: 318 FKRVHMVDAIREITGVDFWQ----------------------------DMTLEEAKAIAA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                +     E G++     +         E +             F+ G P+      
Sbjct: 350 EKKVPVEKHYTEVGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--- 392

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                                      P  + N E+++       F M +          
Sbjct: 393 ---------------------------PLAKKNPEDQRFTDRFELFIMTKE--------- 416

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAF 529
                              +     +     L  F     +KE+ ++   G       A 
Sbjct: 417 -----------------YGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEAL 459

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 460 EYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|322376864|ref|ZP_08051357.1| lysine--tRNA ligase [Streptococcus sp. M334]
 gi|321282671|gb|EFX59678.1| lysine--tRNA ligase [Streptococcus sp. M334]
          Length = 496

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 93/561 (16%), Positives = 180/561 (32%), Gaps = 117/561 (20%)

Query: 10  GDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            DL      D      ++G +   R  G + F  ++D  G  Q+    D+   E  +  +
Sbjct: 49  ADLDKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +    G  +    E +  ++  G++ + A  I  LS A   PLP            +
Sbjct: 109 KADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPEKFHGLTDVETIY 161

Query: 127 KYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A    +   
Sbjct: 162 RKRYLDLISNRESFERFVTRSKIISEIRRFLDQKGFLEVETPVLHNEAGGAAARPFITHH 221

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 222 NAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYAD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E +++   +                       Y   +  +  P    ++ + 
Sbjct: 281 FQDIMDLTEGIIQHAAKSVKGDGP--------------VNYQGTEIKINEPFKRVHMVDA 326

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
                   F + +++                         E A+S        +     E
Sbjct: 327 IKEITGVDFWQDMTL-------------------------EEAKSIAAEKKVPVEKHYTE 361

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G++     +         E +             F+ G P+                  
Sbjct: 362 VGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--------------- 392

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
                          P  + N E+++       F M +                  +   
Sbjct: 393 ---------------PLAKKNPEDERFTDRFELFIMTKE-------------YGNAF--- 421

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
               E+     +    E   +A          ++        A + GMPP GG+  GIDR
Sbjct: 422 ---TELNDPIDQLSRFEAQAKAKELGDDEATGID---YDYIEALEYGMPPTGGLGIGIDR 475

Query: 546 IVMLLLGAKNVREVSLFPMSQ 566
           + MLL     +R+V LFP  +
Sbjct: 476 LCMLLTDTTTIRDVLLFPTMK 496


>gi|307705122|ref|ZP_07641999.1| lysyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307621318|gb|EFO00378.1| lysyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 496

 Score =  243 bits (620), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 92/561 (16%), Positives = 180/561 (32%), Gaps = 117/561 (20%)

Query: 10  GDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            DL      D      ++G +   R  G + F  ++D  G  Q+    D+   E  +  +
Sbjct: 49  ADLDKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +    G  +    E +  ++  G++ + A  I  LS A   PLP            +
Sbjct: 109 KADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPEKFHGLTDVETIY 161

Query: 127 KYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A    +   
Sbjct: 162 RKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHH 221

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 222 NAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYAD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E +++   +                       Y   +  +  P    ++ + 
Sbjct: 281 FQDIMDLTEGIIQHAAKSVKGDGP--------------VNYQGTEIKINEPFKRVHMVDA 326

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
                   F + +++                         E A++        +     E
Sbjct: 327 IKEITGVDFWQDMTL-------------------------EEAKAIAAEKKVPVEKHYTE 361

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G++     +         E +             F+ G P+                  
Sbjct: 362 VGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--------------- 392

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
                          P  + N E+++       F M +                  +   
Sbjct: 393 ---------------PLAKKNPEDERFTDRFELFIMTKE-------------YGNAF--- 421

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
               E+     +    E   +A          ++        A + GMPP GG+  GIDR
Sbjct: 422 ---TELNDPIDQLSRFEAQAKAKELGDDEATGID---YDYIEALEYGMPPTGGLGIGIDR 475

Query: 546 IVMLLLGAKNVREVSLFPMSQ 566
           + MLL     +R+V LFP  +
Sbjct: 476 LCMLLTDTTTIRDVLLFPTMK 496


>gi|190150137|ref|YP_001968662.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307263473|ref|ZP_07545088.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|238692391|sp|B3H1E8|SYK_ACTP7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189915268|gb|ACE61520.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306871116|gb|EFN02845.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 500

 Score =  243 bits (619), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 102/558 (18%), Positives = 188/558 (33%), Gaps = 117/558 (20%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L   D+   V+++G +   R  G   F  I+D  G  Q+    D+    +     S W L
Sbjct: 57  LKEQDI--QVKVAGRIMLKRVMGKASFFTIQDVSGQIQLYVARDNLAEGVYADKVSMWDL 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++  +         TG++ +   ++E+L+ +   PLP   +    +  R++ R+L
Sbjct: 115 ---GDIVGAAGTLF--KTKTGELTVRCSEVELLTKSLR-PLPNKVQGLTDQETRYRQRYL 168

Query: 132 DLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +    +  + R+++++ +R   + ++FIE  TP+L        A+ F+        
Sbjct: 169 DLISNEESRRTFMIRSKMVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDV 228

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +  D+
Sbjct: 229 DMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMIEYYQAYADYHDL 286

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++  E +LR +  +     TV               YG    D   P     + +     
Sbjct: 287 MDNTEELLRKLAIDILGTTTVP--------------YGEYVFDFGKPFERITMHD----- 327

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
                             AI   G G  R   D   +        GL        E    
Sbjct: 328 ------------------AIVKYGNGITREDLDSFEKSVEI--AKGLG------IEIQKS 361

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
            G+G V   +     E   ++          F+   P +                     
Sbjct: 362 WGLGSVVNAIFEEVAEHQLIQ--------PTFLMAHPAEIS------------------- 394

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
                      P    N+E  ++      F   +         +    +A ++D      
Sbjct: 395 -----------PLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAERFD------ 437

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
                              +      +    +      A + G+PP  G   GIDR+ M+
Sbjct: 438 ----------------AQVAAKDAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMI 481

Query: 550 LLGAKNVREVSLFPMSQN 567
              A ++R+V LFP  + 
Sbjct: 482 FANAPSIRDVILFPAMRQ 499


>gi|307701961|ref|ZP_07638969.1| lysyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616606|gb|EFN95795.1| lysyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 496

 Score =  243 bits (619), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 94/561 (16%), Positives = 183/561 (32%), Gaps = 117/561 (20%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            DL   ++        ++G +   R  G + F  ++D  G  Q+    D+   E  +  +
Sbjct: 49  ADLDKEELHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +    G  +    E +  ++  G++ + A  I  LS A   PLP            +
Sbjct: 109 KADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPEKFHGLTDVETIY 161

Query: 127 KYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A    +   
Sbjct: 162 RKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHH 221

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 222 NAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYAD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E +++   +       V+     I  ++  +R           + M +  + 
Sbjct: 281 FQDIMDLTEGIIQHAAKAVKGDGPVNYQGTEIKINEPFKR-----------VHMVDAIKE 329

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
               +F                              D   E A++        +     E
Sbjct: 330 ITGVDFWP----------------------------DMTLEEAKAIAAEKKVPVEKHYTE 361

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G++     +         E +             F+ G P+                  
Sbjct: 362 VGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVS--------------- 392

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
                          P  + N E+++       F M +                  +   
Sbjct: 393 ---------------PLAKKNPEDERFTDRFELFIMTKE-------------YGNAF--- 421

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
               E+     +    E   +A          ++        A + GMPP GG+  GIDR
Sbjct: 422 ---TELNDPIDQLSRFEAQAKAKELGDDEATGID---YDYIEALEYGMPPTGGLGIGIDR 475

Query: 546 IVMLLLGAKNVREVSLFPMSQ 566
           + MLL     +R+V LFP  +
Sbjct: 476 LCMLLTDTTTIRDVLLFPTMK 496


>gi|167036745|ref|YP_001664323.1| lysyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115168|ref|YP_004185327.1| lysyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|238687706|sp|B0KCE4|SYK_THEP3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166855579|gb|ABY93987.1| lysyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928259|gb|ADV78944.1| lysyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 499

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 109/578 (18%), Positives = 201/578 (34%), Gaps = 134/578 (23%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SAC 58
           RT+   D+     +  G  V L+G +   R HG   F DI+D  G  Q+    D      
Sbjct: 44  RTNLSSDIKNDYENFEGKVVTLAGRIMSKRSHGKASFADIQDRDGRIQIYVKYDTVGEKN 103

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +EI K +    ++ + G V             TG+I +     ++LS + ++ LP     
Sbjct: 104 YEIFKILDIGDIIGVTGEV---------FKSKTGEITIRVTDFKLLSKSLQI-LPEKWHG 153

Query: 119 EYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                +R++ R+ DL     + +  +KRT+II ++R  +    F+E  TPIL T +    
Sbjct: 154 LKDPDLRYRQRYTDLIINPEVKEVFLKRTKIIKAIREFLDNRGFLEVETPILHTIAGGAA 213

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ +++   FR+E       P EF  
Sbjct: 214 ARPFITHHNALDIDMY-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNP-EFTL 271

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           L+                     ++E +++                   YG         
Sbjct: 272 LE---------------------LYEAYTDY------------------YG--------- 283

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             M  +TE       +  + I  +        +            D + E+       G+
Sbjct: 284 --MMELTEQLFAYVAQKVNGITKIVYQGTEIDLTPPWKRIT--MVDAIKEYV------GV 333

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +   + DE         +AK LN+   E       M+ G+    +  +           
Sbjct: 334 DFNEVKTDEEAIE-----IAKKLNLETKE------GMKKGEVIALVFDE----------- 371

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
                    ++  +  +  ++MD+P  E +   K+                         
Sbjct: 372 ---------LVEQHLIQPTFVMDYPV-EISPLAKR--------------------KHDNP 401

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++    G E+A+     +      + F      +E  +            A + G
Sbjct: 402 AFTSRFEAFIYGREVANAFSELNDPIDQKERFLEQLKQREAGDEEAHMMDEDFINALEVG 461

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  G+DR+VM +  A ++R+V LFP  +   D
Sbjct: 462 MPPTGGLGIGVDRLVMFMTDAYSIRDVILFPTMKPKND 499


>gi|313637748|gb|EFS03107.1| aspartyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 182

 Score =  242 bits (617), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 100/180 (55%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            RN + +EL ++N     F W+ D+P +E++EE  +   AH+PFT+P+     L   D  
Sbjct: 1   LRNKLGKELDLVNEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSS 60

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            + A  YD+V NG+EI  G +R +  EV    F  +G + E    +FG L  A + G PP
Sbjct: 61  KVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDEAASEQFGFLMEALEYGTPP 120

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           HGGIA G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 121 HGGIALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLATVKKE 180


>gi|311264845|ref|XP_003130365.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Sus
           scrofa]
          Length = 408

 Score =  240 bits (612), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 69/240 (28%), Positives = 114/240 (47%), Gaps = 13/240 (5%)

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
            +F + + + N      +AK +       +   L +Q+ D     AG+  K CS     R
Sbjct: 156 PVFLKANRNWN----SLLAKFITEEQGLGLIRLLGIQEEDVVLVTAGEHKKACSLLGKLR 211

Query: 418 NHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKG 471
              A  L      + +   F F W++DFP +   EE  ++++ AH+PFT P      L  
Sbjct: 212 LECADLLEARGVVLRDPALFSFLWVVDFPLFFPKEEHPQELESAHHPFTAPHPSDIHLLY 271

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            +   +++  YDLV NG E+  G IR H +E+     + V      +      L +A   
Sbjct: 272 TEPQKVRSQHYDLVLNGNEVGGGSIRIHNAELQRYVLAAVLKEDVKL---LSHLLQALDY 328

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPHGGIA G+DR++ L+ GA ++R+V  FP S    DL+  +P ++  E L+   +++
Sbjct: 329 GAPPHGGIALGLDRLMCLVTGAPSIRDVIAFPKSFRGHDLMSNAPDSIPPEDLKPYHIQV 388



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++CG+L  S +G  V L GW+   R +   IFL +RD +G+ QVV   D     +   
Sbjct: 104 RTNTCGELRSSHLGQEVTLCGWIQYRRQN---IFLVLRDFHGLVQVVIPQDEEVLPVFLK 160

Query: 65  VRSEW 69
               W
Sbjct: 161 ANRNW 165


>gi|312074259|ref|XP_003139890.1| DRS-2 protein [Loa loa]
 gi|307764949|gb|EFO24183.1| DRS-2 protein [Loa loa]
          Length = 407

 Score =  239 bits (611), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 123/344 (35%), Positives = 185/344 (53%), Gaps = 14/344 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAK 63
           RTH+CG+L V      V L GW+   R +    FL +RD YG  Q     +     E  +
Sbjct: 29  RTHTCGELRVGHENQEVTLYGWLQFSRLNR---FLVLRDAYGCVQARIPEERKDLVEKIR 85

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V  E VL I+G+V+ R  +  NA++ TG IE+    +E+L+ +         E    E 
Sbjct: 86  IVNCESVLKIEGVVVDRGEQYRNADMRTGDIEVLVNNLELLNTSPANYP--LDEVTSTEE 143

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFLV 182
            +F+YRFLDLR   + + +  R  +++ MR  ++ + NFIE  TP L   +P G+ +F+V
Sbjct: 144 TKFRYRFLDLRTKRMQRALRLRANVVHGMRKYLVEKANFIEVETPTLFRRTPGGSHEFIV 203

Query: 183 P-SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           P  + N G FY+LPQ+PQQ+KQLLM  G DRYFQIA C+RDE  +SDR P EF Q+D+E+
Sbjct: 204 PAPKPNLGKFYSLPQSPQQFKQLLMCGGIDRYFQIARCYRDEGAKSDRQP-EFTQVDVEL 262

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           SF +QD+++  +E+++   + +  +    S  F RI Y  A R +GTDKPDLR P  + +
Sbjct: 263 SFTDQDNVMKLIESIIVESWPKELDDLKPSAPFKRIKYLKAERLFGTDKPDLRIPWTIED 322

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
            T     SE     +    N   +++   +     N    +   
Sbjct: 323 CT-----SELSFLRRREIPNFVVKIFIARSAENVVNEKSLNEWT 361


>gi|312379942|gb|EFR26078.1| hypothetical protein AND_08074 [Anopheles darlingi]
          Length = 366

 Score =  239 bits (611), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 99/259 (38%), Positives = 151/259 (58%), Gaps = 7/259 (2%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+CG+L     G  V L GW+   R      F  +RD YG  Q +   +         
Sbjct: 96  RTHTCGELRAEHAGQSVTLCGWLEFSRMSK---FFTLRDGYGTVQALIAEEDGPRIPLDG 152

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPES 123
           +  E +L + G V  R     N  + TG+IE+  +K+E+L+ +++  P+ V       E+
Sbjct: 153 LPFESILRVTGKVQLRPDGQHNRFMPTGEIEVHVEKLEVLNESKKRLPINVKDHNRAKEN 212

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN-FIECSTPILTASSPEGARDFLV 182
           +R +YR++DLR   + +N+  R+++I +MR  MI +  F+E  TP L   +P GA++F+V
Sbjct: 213 LRLEYRYIDLRNPQMQRNLRLRSQVIMTMRECMINDFGFLEVETPTLFRRTPGGAQEFVV 272

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           PSR   G FY+L Q+PQQ+KQ+LM    DRYFQIA C+RDE  R DR P EF QLD+E+S
Sbjct: 273 PSR-KPGHFYSLVQSPQQFKQMLMVGAIDRYFQIARCYRDESTRPDRQP-EFTQLDIELS 330

Query: 243 FVEQDDILNTMENVLRGVF 261
           F +++ ++  +E VLR  +
Sbjct: 331 FTDREKVIALVEAVLRKSW 349


>gi|154337170|ref|XP_001564818.1| aspartyl-trna synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134061856|emb|CAM38893.1| putative aspartyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 644

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 115/575 (20%), Positives = 211/575 (36%), Gaps = 65/575 (11%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           SCG+ G    G  V +   + R R  G  + FL +R     +        A  + A+++ 
Sbjct: 124 SCGESGRIREGDTVTVRARLERTRSRGKRLAFLHLRQPPLESVQAVCEGKALTKQARNIT 183

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E ++ + G V+ R+A ++ +    G  EL    ++++S A       + +       R 
Sbjct: 184 PESIVDVTG-VLCRAATSVQSTTCQG-WELQVTALQVVSQATTPLPFPYHDTNTKLDTRL 241

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            +R +DLR + +       + +  S R  ++A +FIE  TP L  ++ EG  +       
Sbjct: 242 NHRVMDLRTEQMAATSRLVSALGQSFRNELLALDFIEVHTPKLLGAASEGGSNVFQVDYF 301

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           ++ ++ A  Q+PQ +KQ+++     R F++ P FR E   + R   EF  LD EM   + 
Sbjct: 302 DRKAYLA--QSPQLHKQMMLMGDAMRVFEVGPVFRAEKSLTHRHLTEFIGLDGEMVIKDS 359

Query: 247 D-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             ++L+ +E V+  V  + +  ++                            +     + 
Sbjct: 360 HTEVLDVLEPVMCAVLAQLAQKHSNL-----------------------IDAVWKQQQQQ 396

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG----QPGLAYIFW 361
               E          +P  E      +G       C+   E     G        A   +
Sbjct: 397 QQGLELENSDGGPQPDPATEPPRCDGRGNAQRDVCCEVALERIEFLGITTDASPTAQTPF 456

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA---DARN 418
           ++   G+     P    +    +    +R+   +        G+       A    D   
Sbjct: 457 KISAQGD-----PYHARVGGDGSGCRVLRMSFANAAQLLVSCGESEGVVDGALPADDFTL 511

Query: 419 HIAQELG-IINCNCFEFCWIMD-FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
              + LG +I        +++D FP             +  PF        +  G     
Sbjct: 512 PQERRLGQLIKERYGVDLYVVDGFP------------SSARPFYTMPVDPSTPDGP---- 555

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
                YD+   G EI SG  R H  E++ Q      + +  +++       +F+ G  PH
Sbjct: 556 --TRSYDMYLRGEEICSGAQRVHEIELLEQRLLAKRVDRVGLKD----YVDSFRYGAWPH 609

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG   G++RI +L LG  ++R+VSLFP        
Sbjct: 610 GGFGLGLERIALLFLGLNDIRQVSLFPRDPKRISP 644


>gi|169832789|ref|YP_001694171.1| lysyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|225856392|ref|YP_002737903.1| lysyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|238688279|sp|B1IAN6|SYK_STRPI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|168995291|gb|ACA35903.1| lysyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|225725099|gb|ACO20951.1| lysyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 496

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 93/574 (16%), Positives = 186/574 (32%), Gaps = 126/574 (21%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L           + D      ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSQELKDKYANLDKEQLHDKNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +
Sbjct: 150 KFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E +++   +                       Y   +  +
Sbjct: 269 FTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGP--------------VNYQGTEIKI 314

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
             P    ++ +         F + +++                           A++   
Sbjct: 315 NEPFKRVHMVDAIREITGVDFWQDMTLKE-------------------------AKAIAA 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                +     E G++     +         E +             F+ G P+     A
Sbjct: 350 EKKVPVEKHYTEVGHI-----INAFFEEFVEETLIQPT---------FVYGHPVAVSPLA 395

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGN 472
                                         + N E+++       F M +  G    + N
Sbjct: 396 ------------------------------KKNPEDQRFTDRFELFIMTKEYGNAFTELN 425

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D +   + +++      E+          +                         A + G
Sbjct: 426 DPIDQLS-RFEAQAKAKELGDDEATGIDYD----------------------YIEALEYG 462

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 463 MPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|293608892|ref|ZP_06691195.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829465|gb|EFF87827.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 509

 Score =  239 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 101/581 (17%), Positives = 187/581 (32%), Gaps = 138/581 (23%)

Query: 4   YRTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL                   V+++G V   R      F+ I+D  G  Q+  
Sbjct: 47  KREHYAADLQEQFKDQSKEQIESAEHVYVKVAGRVMLNRGS----FMVIQDMTGRIQLYV 102

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +      +I ++++   +  I       +AE        G + +  +  E+L+ +   PL
Sbjct: 103 DRKGLPKDILETIKGLDLGDI------IAAEGYIGRSGKGDLYVHLEGFELLTKSLR-PL 155

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA 171
           P          ++++ R+LDL  +   +     R +++  +R  +  E F+E  TP++  
Sbjct: 156 PDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLNNERFMEVETPMMHV 215

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   
Sbjct: 216 IPGGASARPFETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHN 274

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  ++   ++ +  D++   EN+L  +  +      V               Y  + 
Sbjct: 275 P-EFTMIEFYQAYADYKDLMALTENMLEKLALDILGTTDVP--------------YQGEV 319

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
              + P    ++           F  IL  NP +           G+R F          
Sbjct: 320 FSFKGPFKKISM-----------FDAILENNPQF------TPENVGDREF---------- 352

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
                                   +AK +     E ++    +    +  F      K  
Sbjct: 353 ------------------------LAKFIREELKEEVKPGFGLGKLQTIVFEETVETKLR 388

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                                    +I D+P               +P          + 
Sbjct: 389 Q----------------------PTFITDYP------------AETSPLARRNDDNPHVT 414

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----Y 526
                     +++    G E+A+G    +      + F      K+  ++          
Sbjct: 415 D---------RFEFFIGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDEAMHYDAEFV 465

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            A + G+PP  G   GIDR+VML   A ++R+V LFP  + 
Sbjct: 466 EALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFPHMRR 506


>gi|325121342|gb|ADY80865.1| lysyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 520

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 100/581 (17%), Positives = 186/581 (32%), Gaps = 138/581 (23%)

Query: 4   YRTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL                   V+++G V   R      F+ I+D  G  Q+  
Sbjct: 58  KREHYAADLQEQFKDQSKEQIESAEHVYVKVAGRVMLNRGS----FMVIQDMTGRIQLYV 113

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +      +I ++++   +  I       +AE        G + +  +  E+L+ +   PL
Sbjct: 114 DRKGLPKDILETIKGLDLGDI------IAAEGYIGRSGKGDLYVHLEGFELLTKSLR-PL 166

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA 171
           P          ++++ R+LDL  +   +     R +++  +R  +  E F+E  TP++  
Sbjct: 167 PDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLNNERFMEVETPMMHV 226

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   
Sbjct: 227 IPGGASARPFETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHN 285

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  ++   ++ +  D++   EN+L  +  +      V               Y  + 
Sbjct: 286 P-EFTMIEFYQAYADYKDLMALTENMLEKLALDILGTTDVP--------------YQGEV 330

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
              + P    ++           F  IL  NP +            +R F          
Sbjct: 331 FSFKGPFKKISM-----------FDAILENNPQF------TPENVSDREF---------- 363

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
                                   +AK +     E ++    +    +  F      K  
Sbjct: 364 ------------------------LAKFIREELKEEVKPGFGLGKLQTIVFEETVETKLR 399

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                                    +I D+P               +P          + 
Sbjct: 400 Q----------------------PTFITDYP------------AETSPLARRNDDNPHVT 425

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----Y 526
                     +++    G E+A+G    +      + F      K+  ++          
Sbjct: 426 D---------RFEFFIGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDEAMHYDAEFV 476

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            A + G+PP  G   GIDR+VML   A ++R+V LFP  + 
Sbjct: 477 EALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFPHMRR 517


>gi|162449905|ref|YP_001612272.1| lysine--tRNA ligase [Sorangium cellulosum 'So ce 56']
 gi|161160487|emb|CAN91792.1| Lysine--tRNA ligase [Sorangium cellulosum 'So ce 56']
          Length = 573

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 111/557 (19%), Positives = 203/557 (36%), Gaps = 99/557 (17%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEIAKSVRSEWVLCIDGLVMSR 80
           R++G V  VR  GG+ F+ +RD  G  Q+     S   FE  + +     +   G+ M+ 
Sbjct: 107 RVAGRVLFVRSFGGVTFVRLRDRTGELQLYCEQGSLADFERLEDIDLGDFVEAHGVAMAT 166

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ + A ++ +L+ A          ++     R++ R++DL  +    
Sbjct: 167 QK---------GELSIRAGRLRLLTKAYRPLPTKTSFKDV--ESRYRMRYVDLVANPHVA 215

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
            + + RT I+ ++R  + A  F+E  TP +        A+ F           + +  AP
Sbjct: 216 GVFRARTAIVAALRGFLDARGFLEVETPTMHTLVGGAAAKPFKTHHNALDLELF-MRIAP 274

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+  GF+R ++IA C+R+E   +   P EF  L+   ++   + +++  E +LR
Sbjct: 275 ELFLKRLVVGGFERVYEIARCYRNEGLSTRHNP-EFTMLEYYQAYATYETLMDATEAMLR 333

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
            V    +      +         A R Y  ++ + R P+               +    L
Sbjct: 334 HVDARLAERLPAEHA-----AWAAQRTYSLERFE-RVPMAE--------GIARALSKSGL 379

Query: 319 SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKH 378
             +    V A  A            + EWA++    G   I W    +G      P    
Sbjct: 380 PADVPQRVAADDAP-----------IKEWAKAAKASGRE-IDWTNFRAGAKKCESP---- 423

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA-DARNHIAQELGIINCNCFEFCWI 437
                            G+  F           F   D R            +     +I
Sbjct: 424 -----------------GELVFCAY--EYVVEPFLTRDYRTEAG--------DKSVPVFI 456

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           +D+P +E +   +K                  K +D   +   +++L  +G E+ +    
Sbjct: 457 IDYP-FEVSPLARK------------------KDSDPSLV--DRFELFIDGRELCNAFSE 495

Query: 498 NHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
            +  E     F      K   E           RA + G+PP  G   G+DR+ MLL GA
Sbjct: 496 LNDPEDQDARFRAQVEKKSRGEEETMDYDADYVRALEHGLPPTAGFGMGVDRLTMLLTGA 555

Query: 554 KNVREVSLFPMSQNFCD 570
            ++R+V LFP+ +   D
Sbjct: 556 TSIRDVILFPLLRPETD 572


>gi|295093804|emb|CBK82895.1| Aspartyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 240

 Score =  237 bits (605), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 115/237 (48%), Positives = 156/237 (65%), Gaps = 5/237 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR  +  ++   DVG  ++++GWV  +R HGG+ F+D+RD YG+ QVV    S    I K
Sbjct: 7   YRNRTMNEITEGDVGQTLKVAGWVENIRDHGGVSFIDLRDMYGVLQVVMRDTSLLDGITK 66

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPE 122
                  + I+G++  R  ET N  I TG IEL A+ +EIL    +++P  +   +E  E
Sbjct: 67  E----DCVSIEGIIEHRDEETYNPKIPTGTIELEAKTVEILGKVYKQIPFEIQTSKETRE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R KYR+LDLR   +  N++ R+++I+ +R +M    F+E  TPIL ASSPEGARD++V
Sbjct: 123 DVRLKYRYLDLRNKKVKDNMIFRSQVISYLRQKMTEMGFLEIQTPILCASSPEGARDYIV 182

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           PSR  +G FYALPQAPQQYKQLLM SGFD+YFQIAPCFRDED R+DR PGE   L +
Sbjct: 183 PSRKFKGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGESTSLTL 239


>gi|222874567|gb|EEF11698.1| predicted protein [Populus trichocarpa]
          Length = 166

 Score =  237 bits (604), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 66/160 (41%), Positives = 96/160 (60%)

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            W++DFP +E +EE  +    H+PFT P+ G E L   D  +  A  YD+V NG+E+  G
Sbjct: 1   LWVVDFPMFEHDEENDRWAAVHHPFTSPKDGHEELMVTDPANCLAKAYDMVLNGWELGGG 60

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +R H ++V  + F  + IS E    +FG L  A Q G PPHGG+A G+DR++ L+ GA 
Sbjct: 61  SVRIHRADVQSKVFDALKISPEDARAKFGYLLDALQYGAPPHGGLAFGLDRLITLMTGAD 120

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           ++R+V  FP +Q   DLL  +PS V  +QLREL +R+   
Sbjct: 121 SIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIRLRNP 160


>gi|330936725|gb|EGH40910.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 211

 Score =  236 bits (603), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 101/209 (48%), Positives = 139/209 (66%), Gaps = 1/209 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDR 212
           SR + GSF+ALPQ+PQ +KQLLM +GFDR
Sbjct: 183 SRTHPGSFFALPQSPQLFKQLLMVAGFDR 211


>gi|302524477|ref|ZP_07276819.1| lysyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302433372|gb|EFL05188.1| lysyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 1103

 Score =  236 bits (602), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 103/555 (18%), Positives = 189/555 (34%), Gaps = 123/555 (22%)

Query: 15   SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            S  G  VR++G V  +R  GG+ F  I+D  G  Q++ +           +         
Sbjct: 660  SHTGKRVRVAGRVLALRTLGGLCFARIKDFSGELQLMLDAKVL------DLTGWRSGVDL 713

Query: 75   GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            G  +  S E I      G++ +   +  I +     PLP   +       R + R+LDL 
Sbjct: 714  GDHVGVSGEVITTR--RGELSVLVDEWTITAKCL-HPLPDKRKGLTDPETRVRQRYLDLA 770

Query: 135  RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
             +    N+++ R+ ++ ++R R+  ++F+E  TP+L T      AR F+          Y
Sbjct: 771  VNPDSANMLRLRSTVVRAVRERLHKDDFLEVETPMLQTIHGGANARPFVTHINAYDMRMY 830

Query: 193  ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
             L  AP+ Y + L  +G +R F++   FR+E   +   P EF  L+   ++ + + + + 
Sbjct: 831  -LRIAPELYLKRLCVAGVERVFELNRNFRNEGVDATHNP-EFTMLEAYQAYADYNAMRHL 888

Query: 253  MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            M ++++   E                       YG     +R P     + EH +  ++ 
Sbjct: 889  MRDLIQYAAE---------------------AAYGAQI--VRRPDADGRIVEHDISGDWP 925

Query: 313  VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
            V                       ++A  D + E                      +   
Sbjct: 926  VIP--------------------VHKAVSDALGE---------------------EIDSH 944

Query: 373  GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
             P+A    +     + V  D   GD                            ++  +  
Sbjct: 945  TPIATLRKLCAAAGVPVPEDASAGDLVLKAHEH--------------------LVEGSTV 984

Query: 433  EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
               +  D+P      E   +   H                D L   A ++DL+  G E+ 
Sbjct: 985  LPTFYTDYP-----TEVSPLTRQHR--------------TDPL--LAERWDLIAFGSEVG 1023

Query: 493  SGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
            +            +      +                  A + GMPP GG+  G+DR++M
Sbjct: 1024 TAYTELTDPLEQRRRLEAQSLRAASGDVEAMELDEDFLLALEHGMPPTGGLGLGVDRLLM 1083

Query: 549  LLLGAKNVREVSLFP 563
            +L G  ++R+  LFP
Sbjct: 1084 MLSGT-SIRQTVLFP 1097


>gi|116180536|ref|XP_001220117.1| hypothetical protein CHGG_00896 [Chaetomium globosum CBS 148.51]
 gi|88185193|gb|EAQ92661.1| hypothetical protein CHGG_00896 [Chaetomium globosum CBS 148.51]
          Length = 695

 Score =  236 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 139/636 (21%), Positives = 237/636 (37%), Gaps = 91/636 (14%)

Query: 18  GSFVRLSGWVHRVR-PHGGIIFLDIR-DHY---GITQVVANPDSACFEIAKSVRS---EW 69
           G  V + G++ R R     + F DI+ D+     IT      +S    + + +R      
Sbjct: 91  GQTVTVHGFLFRKRIKSSKLAFADIQIDNGPAVQITSSFQEQNSPAHAVNQDLRGIPLHS 150

Query: 70  VLCIDGLV-------------MSRSAETINANIITG------------QIELSAQKIEIL 104
            + + G V             +  +        +TG            +I+L    I+ L
Sbjct: 151 PVSVTGTVAQLHTNSQPDDTLLDTAKADGETQSLTGSSRPGSFPDQVFRIDLDLTSIQPL 210

Query: 105 SVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIE 163
           +V  +  +   G +  P S     R L +R  D L   ++ R +I   +R  +    F E
Sbjct: 211 NVFPKDIIVSKGVQFPPSS-----RHLQIRFSDALRTRLLVRPQIAFQLRKSLNDLAFTE 265

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA--PCFR 221
             TP+L  SS                S ++ P A      LL+AS    Y +I      R
Sbjct: 266 VETPVLAPSST---------------SRFSWPAASGDITNLLVASETKIYGRIGNQSSHR 310

Query: 222 DEDPRSDRLPGEFY----QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
            +   S  +  + +    QLD+EMSF + +D++ T+E+++  +    ++  +V +    +
Sbjct: 311 HDITASMTVTAKRWANSAQLDLEMSFAKGEDVMRTVESIVSDLAVSLNSDFSVVDTGEEV 370

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
                          L  P    ++  H  +     F                 +G    
Sbjct: 371 YLAPKKSLLNRVDHIL--PRSFVSMITHLENPVVEAFR---------FRPNSVGEGQVPT 419

Query: 338 RAFCDRMNEW---ARSQGQPGLAYIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDM 393
            +F D + +    A SQ   G A +   +D S  + G+ P+       + +  +    D 
Sbjct: 420 SSFVDGLMKTLPPALSQNPDG-APVALIIDSSKPLRGLSPLGFEGAGALESSEMPGLADF 478

Query: 394 QDGDSCFFIAGDPLKFC---SFAADARNHI---AQELGIINCN-CFEFCWIMDFPFYEWN 446
           +DGD   F A     F    +     R+ +   A   G++  +  F+F W+ +FP +  +
Sbjct: 479 EDGDVLVFQARKDEPFQGGSTAIGTFRSLVYQTAVSKGLLPRDLSFKFLWVNNFPMFTPD 538

Query: 447 EEEK-------KIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            E              H+PFT P       L   + L  +   YDLV NG E+  G  R 
Sbjct: 539 NETDPGQGGHAGFSATHHPFTAPLTNEDVELLATNPLKARGDHYDLVVNGVELGGGSRRI 598

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
           H++++       +    +    +F  L  A + G PPH G A G DR+V +L    +VR+
Sbjct: 599 HVAKMQEYIMREILKMTDSGVAQFSHLLEALRAGCPPHAGFALGFDRLVAVLTYTDSVRD 658

Query: 559 VSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           V  FP S    DL + SP  ++ EQL    L     
Sbjct: 659 VIAFPKSMKGEDLTVKSPGRITKEQLDTYHLAFPSK 694


>gi|299066994|emb|CBJ38189.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum CMR15]
          Length = 510

 Score =  236 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 101/574 (17%), Positives = 179/574 (31%), Gaps = 130/574 (22%)

Query: 6   THSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL                  V L+G +   R  G   F  ++D  G  Q     D
Sbjct: 45  THHAADLHTRYSETDQPALEAANVEVALAGRMMLKRVMGKASFATVQDGSGQIQFYITRD 104

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               ++  + +   +    G +++        N   G++ +  Q++ +LS +   PLP  
Sbjct: 105 RVGEDLYAAFKHWDL----GDIIAARGVLFRTN--KGELSVQVQELRLLSKSLR-PLPDK 157

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + ++++ R++DL            RT+ I S+R  M    F+E  TP+L     
Sbjct: 158 FHGLADQEMKYRQRYVDLIVSPETRNTFRARTKAIASLRRHMSDAGFMEVETPMLHPIPG 217

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R +                   
Sbjct: 218 GATAKPFITHHNALDMQMF-LRIAPELYLKRLIVGGFERVY------------------- 257

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
                                        E +          R   +  +  +     D 
Sbjct: 258 -----------------------------EINRNFRNEGVSPRHNPEFTMMEFYAAYTDY 288

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
           R    + + TE+ +       +   ++N       +           C  + ++A     
Sbjct: 289 R---WLMDYTENLIRQAAIDATGSAALNYQGRELDLSKPFHRLT--ICQAIQKFAPQYTD 343

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
             LA   +   E         + K     N       L+   G     +  +  +     
Sbjct: 344 AQLADADFLRTE---------LKKFKIDTNAPQF---LNAGVGTLQLVLFEETAESQ--- 388

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                             +E  +I+D+P                            +G+D
Sbjct: 389 -----------------LWEPTFIVDYP---------------------VEVSPLARGSD 410

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAF 529
            L     +++L   G EIA+G    +  E   + F      K+  +           RA 
Sbjct: 411 TLPGITERFELFITGREIANGFSELNDPEDQAERFRKQVEQKDAGDEEAMFYDADYIRAL 470

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + GMPP GG   GIDR+VMLL  + N+R+V LFP
Sbjct: 471 EYGMPPTGGCGIGIDRLVMLLTDSPNIRDVILFP 504


>gi|262375839|ref|ZP_06069071.1| lysyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262309442|gb|EEY90573.1| lysyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 509

 Score =  236 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 101/584 (17%), Positives = 193/584 (33%), Gaps = 144/584 (24%)

Query: 4   YRTHSCGDLGVS---------DVGSFV--RLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL            + G  V  +++G V   R      F+ I+D  G  Q+  
Sbjct: 47  KREHYAQDLQDQFADKSKEEIEAGEKVYVKVAGRVMLNRGS----FIVIQDMTGRIQLYV 102

Query: 53  NPDSACFEI---AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
                  ++    K +    ++ ++G +  RS +        G + +  +  E+L+ +  
Sbjct: 103 ARKELAADVLATIKGLDLGDIIAVEGYI-GRSGK--------GDLYVHIEHFELLTKSLR 153

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPI 168
            PLP          ++++ R+LDL  +   +     R +++  +R  +  + ++E  TP+
Sbjct: 154 -PLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTEKRYMEVETPM 212

Query: 169 LTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           +        AR F         S + L  AP+ Y + L+  GF+R F+I   FR+E   +
Sbjct: 213 MHVIPGGASARPFETHHNALDMSLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVST 271

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
              P EF  ++   ++ +  D++   E +L  +  +      V               YG
Sbjct: 272 RHNP-EFTMIEFYQAYADYKDLMELTEQMLERLAIDILGTTDVP--------------YG 316

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
            +    + P    ++           F  IL  NP +            +R F       
Sbjct: 317 DEVYSFKGPFKKISM-----------FDAILENNPQF------TPENVNDREF------- 352

Query: 348 ARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407
                                      +AK L     E ++    +    +  F      
Sbjct: 353 ---------------------------LAKFLQEELKEQVKPGFGLGKLQTMVFEETVET 385

Query: 408 KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
           K                           +I ++P      E   +               
Sbjct: 386 KLRQ----------------------PTFITEYP-----AETSPLA-------------- 404

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL-- 525
             + ND       +++    G E+A+G    +      + F      K+  ++       
Sbjct: 405 --RRNDHNPHITDRFEFFIGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDEAMHYDA 462

Query: 526 --YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
               A + G+PP  G   GIDR+VM+   A ++R+V LFP  ++
Sbjct: 463 DFVEALEYGLPPTAGEGIGIDRLVMIFANAASIRDVILFPHMRH 506


>gi|71746658|ref|XP_822384.1| aspartyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|70832052|gb|EAN77556.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei]
          Length = 541

 Score =  235 bits (600), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 113/554 (20%), Positives = 196/554 (35%), Gaps = 66/554 (11%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R+ G V   R  G + F+ +R     +  V    +      K +  E ++ + G++  + 
Sbjct: 50  RVRGRVENFRVRGKLAFIQLRQPPSHSIQVVAAGAEISHKVKELTPESIVDVIGVI--KP 107

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E    ++     EL A  IE++S A         ++      R   R++D+R       
Sbjct: 108 TERPVTSVSCSNYELHATSIEVVSKAAVPLPFPLHDQNAKLDTRLNNRYIDMRTPLAVAM 167

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           I   +    S R ++++ +F+E  TP +  ++ EG           + +F A  Q+PQ Y
Sbjct: 168 IRLVSAAAQSFRTQLLSRDFVELHTPKIIGTASEGGSALFSLDYFGRQAFLA--QSPQLY 225

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGV 260
           KQ+ +     R F+I P FR E   + R   EF  LD E +  E   ++L+ +E++L G+
Sbjct: 226 KQMAIMGDGMRVFEIGPVFRAEKSLTHRHLTEFTGLDAEFTVDEFYTELLDVLESILCGM 285

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
             +    N    +  R    +            R   I+  V E  +      F    S 
Sbjct: 286 IWKLQTENAEWISQARAALMELDSTEDCGTVVPRREDIVCEVAEEIIAMYNIRFDDAAS- 344

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
                +          +R                              +   GP    + 
Sbjct: 345 ----RIAPSVPTEPSEDRYH--------------------------ARIGTSGPKVLRMT 374

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAG--DPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
             +   +    D Q       + G  D      F  +    + +   +I        +++
Sbjct: 375 FRDALQLIRDNDHQHAGRQQEVVGESDEEVVVDFNLNQERALGE---LIRLRYGVDLYVV 431

Query: 439 D-FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           D FP             A   +TMP    E           A  +D+   G EI SGG R
Sbjct: 432 DQFPL-----------AARPFYTMPHPSEE---------GVACGFDMYLRGEEICSGGQR 471

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            H    ++ +     +    + +       +F+ G  PHGG   G++RIV+ LLGA+++R
Sbjct: 472 IHDVAQLIHSMEQRRMEAAHMRD----YVDSFRYGAWPHGGFGLGLERIVLFLLGARDIR 527

Query: 558 EVSLFPMSQNFCDL 571
            VSLFP        
Sbjct: 528 RVSLFPRDPRRLAP 541


>gi|183234212|ref|XP_650600.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
 gi|169801208|gb|EAL45214.2| hypothetical protein EHI_047810 [Entamoeba histolytica HM-1:IMSS]
          Length = 769

 Score =  235 bits (600), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 108/584 (18%), Positives = 197/584 (33%), Gaps = 77/584 (13%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSV 65
              G          V ++G V   R     + F+D+ D     Q++ N   + +E  +  
Sbjct: 40  KYSGLEKSQVSDDIVSVAGRVLSKRSSSSALMFIDLHDSQTKLQIMLNK--SAYENKEDF 97

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            S   +   G +   +         TG++ L      ILS      LP        +  R
Sbjct: 98  VSLTKMIYRGDICGFTG--HPTRTKTGELSLIPISGMILSPCL-HMLPSMHYGLGDQETR 154

Query: 126 FKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP 183
           F+ R+LDL  +    KN V RT+++ ++R  +  + F+E  TPIL T      AR F+  
Sbjct: 155 FRKRYLDLIVNPESVKNFVLRTKVVKAVRKYLDDKGFLEVETPILNTIPGGATARPFITH 214

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y +  AP+ Y + L+  G +R ++I   FR+E       P EF   +  M++
Sbjct: 215 HNQLDIQMY-MRIAPELYLKELVVGGINRVYEIGRLFRNEGIDQTHNP-EFTTCEFYMAY 272

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP------- 296
            + +DI+   E +L  + ++ + G+T      R+   +        +   + P       
Sbjct: 273 ADYNDIMKMTEELLGNMVKDITGGSTKLEIKDRLMDINNEEDIKMLEKFFKEPIPRPFNS 332

Query: 297 -----IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
                +I  + TE   + +      +  +   +                   ++      
Sbjct: 333 AECSKVIEKHCTELNYYYDGNNEKAMKKLFADFVTEKKMVLDFTAPFKRISYVHALEEKF 392

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
           G+     I   LD        GP A        +   +R +         I  +P     
Sbjct: 393 GEK----IPRPLD--------GPEALTF----LKKQAIRFNA--------ICAEPQTTAR 428

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
                         +I  +  +  ++ D P         ++      +   +  +     
Sbjct: 429 VMDKLFG------DLIEVDLVQPTFVCDQP---------QLMSPLAKYHRSEPEL----- 468

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYR 527
                    +++L     EIA+     +   V    F      K   ++           
Sbjct: 469 -------TERFELFILKREIANAYTELNNPIVQRSNFEQQAKDKAAGDDEAQLVDEVFLD 521

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           A +   PP GG   GIDR+ MLL    N++EV LFP  +   +L
Sbjct: 522 AIEHAFPPTGGWGLGIDRLAMLLADVDNIKEVILFPTMRPEDEL 565


>gi|169633913|ref|YP_001707649.1| lysyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|169796805|ref|YP_001714598.1| lysyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|215484283|ref|YP_002326510.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|301345962|ref|ZP_07226703.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301512378|ref|ZP_07237615.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301595787|ref|ZP_07240795.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|226737088|sp|B7GXW0|SYK_ACIB3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238688078|sp|B0V9L5|SYK_ACIBY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238688250|sp|B0VSE0|SYK_ACIBS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|169149732|emb|CAM87623.1| lysyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|169152705|emb|CAP01708.1| lysyl-tRNA synthetase [Acinetobacter baumannii]
 gi|213987992|gb|ACJ58291.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
          Length = 509

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 99/581 (17%), Positives = 186/581 (32%), Gaps = 138/581 (23%)

Query: 4   YRTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL                   V+++G V   R      F+ I+D  G  Q+  
Sbjct: 47  KREHYAADLQEQFKDQSKEQIESAEHVYVKVAGRVMLNRGS----FMVIQDMTGRIQLYV 102

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +      +  ++++   +  I       +AE        G + +  +  E+L+ +   PL
Sbjct: 103 DRKGLPKDTLETIKGLDLGDI------IAAEGYIGRSGKGDLYVHLEGFELLTKSLR-PL 155

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA 171
           P          ++++ R+LDL  +   +     R +++  +R  +  E F+E  TP++  
Sbjct: 156 PDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHV 215

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   
Sbjct: 216 IPGGASARPFETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHN 274

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  ++   ++ +  D++   EN+L  +  +      V               Y  + 
Sbjct: 275 P-EFTMIEFYQAYADYKDLMALTENMLEKLALDILGTTDVP--------------YQGEV 319

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
              + P    ++           F  IL  NP +           G+R F          
Sbjct: 320 FSFKGPFKKISM-----------FDAILENNPQF------TPENVGDREF---------- 352

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
                                   +AK +     E ++    +    +  F      K  
Sbjct: 353 ------------------------LAKFVREELKEEVKPGFGLGKLQTIVFEETVETKLR 388

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                                    +I ++P               +P          + 
Sbjct: 389 Q----------------------PTFITEYP------------AETSPLARRNDDNPHIT 414

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----Y 526
                     +++    G E+A+G    +      + F      K+  ++          
Sbjct: 415 D---------RFEFFIGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDEAMHYDAEFV 465

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            A + G+PP  G   GIDR+VML   A ++R+V LFP  + 
Sbjct: 466 EALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFPHMRR 506


>gi|260555931|ref|ZP_05828151.1| lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260410842|gb|EEX04140.1| lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 520

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 99/581 (17%), Positives = 186/581 (32%), Gaps = 138/581 (23%)

Query: 4   YRTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL                   V+++G V   R      F+ I+D  G  Q+  
Sbjct: 58  KREHYAADLQEQFKDQSKEQIESAEHVYVKVAGRVMLNRGS----FMVIQDMTGRIQLYV 113

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +      +  ++++   +  I       +AE        G + +  +  E+L+ +   PL
Sbjct: 114 DRKGLPKDTLETIKGLDLGDI------IAAEGYIGRSGKGDLYVHLEGFELLTKSLR-PL 166

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA 171
           P          ++++ R+LDL  +   +     R +++  +R  +  E F+E  TP++  
Sbjct: 167 PDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHV 226

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   
Sbjct: 227 IPGGASARPFETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHN 285

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  ++   ++ +  D++   EN+L  +  +      V               Y  + 
Sbjct: 286 P-EFTMIEFYQAYADYKDLMALTENMLEKLAIDILGTTDVP--------------YQGEV 330

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
              + P    ++           F  IL  NP +           G+R F          
Sbjct: 331 FSFKGPFKKISM-----------FDAILENNPQF------TPENVGDREF---------- 363

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
                                   +AK +     E ++    +    +  F      K  
Sbjct: 364 ------------------------LAKFIREELKEEVKPGFGLGKLQTIVFEETVETKLR 399

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                                    +I ++P               +P          + 
Sbjct: 400 Q----------------------PTFITEYP------------AETSPLARRNDDNPHIT 425

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----Y 526
                     +++    G E+A+G    +      + F      K+  ++          
Sbjct: 426 D---------RFEFFIGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDEAMHYDAEFV 476

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            A + G+PP  G   GIDR+VML   A ++R+V LFP  + 
Sbjct: 477 EALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFPHMRR 517


>gi|302388757|ref|YP_003824578.1| lysyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302199385|gb|ADL06955.1| lysyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 490

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 75/314 (23%), Positives = 138/314 (43%), Gaps = 24/314 (7%)

Query: 5   RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+C ++        GS   ++G +  +R HG   F DI+D  G  Q+    D    E+
Sbjct: 36  RTHNCLEIKENFEKLEGSETSIAGRIMAIRGHGKAAFFDIQDEKGRLQIYIKKDHVGDEV 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +   +  I G+      E        G+I + A +I +L+ +   PLP        
Sbjct: 96  YEIFKKLDIGDIIGV------EGKIFKTQKGEISVMADRITVLAKSLR-PLPEKWHGLKD 148

Query: 122 ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
              R++ R+LDL  +  + +  V R++II ++R  + +  FIE  TP+LT  +    AR 
Sbjct: 149 VDTRYRQRYLDLIVNPDVRRTFVTRSKIIRAIRNYLDSRGFIEVETPVLTPLAGGAAARP 208

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+  GF++ ++I   FR+E       P EF  +++
Sbjct: 209 FITHHNALDIDLY-LRIATELYLKRLIVGGFEKVYEIGKDFRNEGISIKHNP-EFTMIEL 266

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTD 289
             ++ +  D++   E+++  V +E      V            + R+   +A+++Y G D
Sbjct: 267 YQAYADYQDMMELTEDMISHVAKEVLGTTKVVYQGEEIDLTPPWTRMTMVEAVKKYAGVD 326

Query: 290 KPDLRNPIIMHNVT 303
             +L+       V 
Sbjct: 327 FNELKTDEEARAVA 340


>gi|238685500|sp|A3M3D6|SYK_ACIBT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|193076724|gb|ABO11430.2| lysyl-tRNA-synthase [Acinetobacter baumannii ATCC 17978]
          Length = 509

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 99/581 (17%), Positives = 186/581 (32%), Gaps = 138/581 (23%)

Query: 4   YRTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL                   V+++G V   R      F+ I+D  G  Q+  
Sbjct: 47  KREHYAADLQEQFKDQSKEQIESAEHVYVKVAGRVMLNRGS----FMVIQDMTGRIQLYV 102

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +      +  ++++   +  I       +AE        G + +  +  E+L+ +   PL
Sbjct: 103 DRKGLPKDTLETIKGLDLGDI------IAAEGYIGRSGKGDLYVHLEGFELLTKSLR-PL 155

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA 171
           P          ++++ R+LDL  +   +     R +++  +R  +  E F+E  TP++  
Sbjct: 156 PDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHV 215

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   
Sbjct: 216 IPGGASARPFETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHN 274

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  ++   ++ +  D++   EN+L  +  +      V               Y  + 
Sbjct: 275 P-EFTMIEFYQAYADYKDLMALTENMLEKLAIDILGTTDVP--------------YQGEV 319

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
              + P    ++           F  IL  NP +           G+R F          
Sbjct: 320 FSFKGPFKKISM-----------FDAILENNPQF------TPENVGDREF---------- 352

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
                                   +AK +     E ++    +    +  F      K  
Sbjct: 353 ------------------------LAKFVREELKEEVKPGFGLGKLQTIVFEETVETKLR 388

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                                    +I ++P               +P          + 
Sbjct: 389 Q----------------------PTFITEYP------------AETSPLARRNDDNPHIT 414

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----Y 526
                     +++    G E+A+G    +      + F      K+  ++          
Sbjct: 415 D---------RFEFFIGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDEAMHYDAEFV 465

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            A + G+PP  G   GIDR+VML   A ++R+V LFP  + 
Sbjct: 466 EALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFPHMRR 506


>gi|222623269|gb|EEE57401.1| hypothetical protein OsJ_07579 [Oryza sativa Japonica Group]
          Length = 665

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 105/596 (17%), Positives = 210/596 (35%), Gaps = 72/596 (12%)

Query: 5   RTHSCGDLGVS----DVGSF-----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           RTH+  +L       + G       V ++G +   R  G ++F+ +RD  G  Q+    D
Sbjct: 99  RTHTTKELQDGYTHLENGEVCADVAVSIAGRIVARRAFGKLVFMTVRDDSGTIQLYCEKD 158

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           S   E  + +++   +          A         G++ +  +  EIL+ +  LPLP  
Sbjct: 159 SLTEEQFEQLKTIIDIG-----DIIGANGSIKKTEKGELSVYVKNFEILTKSL-LPLPDK 212

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                    R++ R++D+     +      R + ++ +R  M +  FIE  TP+L  ++ 
Sbjct: 213 YHGLTDVDKRYRQRYVDMIANPEVADVFRTRAKAVSEIRKTMESFGFIEVETPVLQGAAG 272

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+      Q   Y L  A + + + ++  G ++ ++I   FR+E   +   P E
Sbjct: 273 GAEARPFITHHNSLQRDLY-LRIATELHLKRMLVGGLEKVYEIGRIFRNEGISTRHNP-E 330

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN--GNTVSNNFLRICYDDA--------- 282
           F  ++M  ++ + + ++N  E ++                   +R    +A         
Sbjct: 331 FTTIEMYEAYSDYESMMNLAEEIVTRCAMATHGKLRVDYQEYTVRSTQCEASRPGVEMES 390

Query: 283 ------IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
                  R+ G   P +   ++   ++      ++      +S+   +    + +     
Sbjct: 391 ATAKAIGRKKGVKTPPVPWLVLTDAISYGHCQCQWLAMGTEISLERPWRRETMHSLVKEA 450

Query: 337 NRAFCDRMNEWARSQGQPGLAY-IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
                +   E    +     A  I    +E+ ++     V   LN    E +     +Q 
Sbjct: 451 TGIDFNSFGE--DLESAKNAARGIKTESNENISLQACSSVGHVLN-EVFETVVESSLVQP 507

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
                F+   P++    A   R +     G+             F  +    E       
Sbjct: 508 ----TFVLDYPVEISPLAKPHRRYA----GLTER----------FELFICGREIG----- 544

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLV---CNGFEIASGGIRNHMSEVMLQAFSNVG 512
            N F+     ++ L       ++  + DLV     G         N     M +   +  
Sbjct: 545 -NAFSELTDPIDQLVFGGFDKLEMQRPDLVNMQKRGRFENQIKQHNAKRAAMTKEVKSTE 603

Query: 513 ISKEVVENRFG-----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              E  +  +          + + GMPP  G+  GIDR+VMLL  + ++R+V  FP
Sbjct: 604 GKHEEDDFSYEVTLDEDFLTSLEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFP 659


>gi|239502972|ref|ZP_04662282.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 509

 Score =  234 bits (598), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 99/581 (17%), Positives = 185/581 (31%), Gaps = 138/581 (23%)

Query: 4   YRTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL                   V+++G V   R      F+ I+D  G  Q+  
Sbjct: 47  KREHYAADLQEQFKDQSKEQIESAEHVYVKVAGRVMLNRGS----FMVIQDMTGRIQLYV 102

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +      +  ++++   +  I       +AE        G + +  +  E+L+ +   PL
Sbjct: 103 DRKGLPKDTLETIKGLDLGDI------IAAEGYIGRSGKGDLYVHLEGFELLTKSLR-PL 155

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA 171
           P          ++++ R+LDL  +   +     R +++  +R  +  E F+E  TP++  
Sbjct: 156 PDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHV 215

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   
Sbjct: 216 IPGGASARPFETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHN 274

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  ++   ++ +  D++   EN+L  +  +      V               Y  + 
Sbjct: 275 P-EFTMIEFYQAYADYKDLMALTENMLEKLALDILGTTDVP--------------YQGEV 319

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
              + P    ++           F  IL  NP +           G+R F          
Sbjct: 320 FSFKGPFKKISM-----------FDAILENNPQF------TPENVGDREF---------- 352

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
                                   +AK +     E ++    +    +  F      K  
Sbjct: 353 ------------------------LAKFVREELKEEVKPGFGLGKLQTIVFEETVETKLR 388

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                                    +I ++P               +P          + 
Sbjct: 389 Q----------------------PTFITEYP------------AETSPLARRNDDNPHIT 414

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----Y 526
                     +++    G E+A+G    +        F      K+  ++          
Sbjct: 415 D---------RFEFFIGGRELANGFSELNDPIDQAARFQAQVAEKDAGDDEAMHYDAEFV 465

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            A + G+PP  G   GIDR+VML   A ++R+V LFP  + 
Sbjct: 466 EALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFPHMRR 506


>gi|213156802|ref|YP_002318463.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|332853679|ref|ZP_08434909.1| lysine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332870858|ref|ZP_08439503.1| lysine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|213055962|gb|ACJ40864.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|332728503|gb|EGJ59877.1| lysine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332731959|gb|EGJ63237.1| lysine--tRNA ligase [Acinetobacter baumannii 6013113]
          Length = 520

 Score =  234 bits (598), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 99/581 (17%), Positives = 186/581 (32%), Gaps = 138/581 (23%)

Query: 4   YRTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL                   V+++G V   R      F+ I+D  G  Q+  
Sbjct: 58  KREHYAADLQEQFKDQSKEQIESAEHVYVKVAGRVMLNRGS----FMVIQDMTGRIQLYV 113

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +      +  ++++   +  I       +AE        G + +  +  E+L+ +   PL
Sbjct: 114 DRKGLPKDTLETIKGLDLGDI------IAAEGYIGRSGKGDLYVHLEGFELLTKSLR-PL 166

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA 171
           P          ++++ R+LDL  +   +     R +++  +R  +  E F+E  TP++  
Sbjct: 167 PDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHV 226

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   
Sbjct: 227 IPGGASARPFETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHN 285

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  ++   ++ +  D++   EN+L  +  +      V               Y  + 
Sbjct: 286 P-EFTMIEFYQAYADYKDLMALTENMLEKLALDILGTTDVP--------------YQGEV 330

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
              + P    ++           F  IL  NP +           G+R F          
Sbjct: 331 FSFKGPFKKISM-----------FDAILENNPQF------TPENVGDREF---------- 363

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
                                   +AK +     E ++    +    +  F      K  
Sbjct: 364 ------------------------LAKFVREELKEEVKPGFGLGKLQTIVFEETVETKLR 399

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                                    +I ++P               +P          + 
Sbjct: 400 Q----------------------PTFITEYP------------AETSPLARRNDDNPHIT 425

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----Y 526
                     +++    G E+A+G    +      + F      K+  ++          
Sbjct: 426 D---------RFEFFIGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDEAMHYDAEFV 476

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            A + G+PP  G   GIDR+VML   A ++R+V LFP  + 
Sbjct: 477 EALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFPHMRR 517


>gi|260550687|ref|ZP_05824895.1| lysyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260406193|gb|EEW99677.1| lysyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 520

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 99/581 (17%), Positives = 186/581 (32%), Gaps = 138/581 (23%)

Query: 4   YRTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL                   V+++G V   R      F+ I+D  G  Q+  
Sbjct: 58  KREHYAADLQEQFKDQSKEQIESAEHVYVKVAGRVMLNRGS----FMVIQDMTGRIQLYV 113

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +      +  ++++   +  I       +AE        G + +  +  E+L+ +   PL
Sbjct: 114 DRKGLPKDTLETIKGLDLGDI------IAAEGYIGRSGKGDLYVHLEGFELLTKSLR-PL 166

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA 171
           P          ++++ R+LDL  +   +     R +++  +R  +  E F+E  TP++  
Sbjct: 167 PDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHV 226

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   
Sbjct: 227 IPGGASARPFETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHN 285

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  ++   ++ +  D++   EN+L  +  +      V               Y  + 
Sbjct: 286 P-EFTMIEFYQAYADYKDLMALTENMLEKLALDILGTTDVP--------------YQGEV 330

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
              + P    ++           F  IL  NP +           G+R F          
Sbjct: 331 FSFKGPFKKISM-----------FDAILENNPQF------TPENVGDREF---------- 363

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
                                   +AK +     E ++    +    +  F      K  
Sbjct: 364 ------------------------LAKFVREELKEEVKPGFGLGKLQTIVFEETVETKLR 399

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                                    +I ++P               +P          + 
Sbjct: 400 Q----------------------PTFITEYP------------AETSPLARRNDDNPHIT 425

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----Y 526
                     +++    G E+A+G    +      + F      K+  ++          
Sbjct: 426 D---------RFEFFIGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDEAMHYDAEFV 476

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            A + G+PP  G   GIDR+VML   A ++R+V LFP  + 
Sbjct: 477 EALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFPHMRR 517


>gi|167394823|ref|XP_001741114.1| lysyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165894451|gb|EDR22438.1| lysyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar
           SAW760]
          Length = 768

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 107/588 (18%), Positives = 199/588 (33%), Gaps = 95/588 (16%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSV 65
              G          V ++G V   R     + F+D+ D     Q++ N   + +E  +  
Sbjct: 40  KYSGLEKSQVSDDIVSVAGRVLSKRSSSAALMFIDLHDSQTKLQIMLNK--SAYENKEEF 97

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            S   +   G +             TG++ L      ILS      LP        +  R
Sbjct: 98  SSLTKMIYRGDIC--GFIGHPTRTKTGELSLIPTTGMILSPCL-HMLPSMHYGLGDQETR 154

Query: 126 FKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP 183
           F+ R+LDL  +    KN V RT+++ ++R  +  + F+E  TPIL T      AR F+  
Sbjct: 155 FRKRYLDLIVNPETVKNFVLRTKVVKAVRKYLDDKGFLEVETPILNTIPGGATARPFITH 214

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y +  AP+ Y + L+  G +R ++I   FR+E       P EF   +  M++
Sbjct: 215 HNQLDIQMY-MRIAPELYLKELIVGGINRVYEIGRLFRNEGIDQTHNP-EFTTCEFYMAY 272

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP------- 296
            + +DI+   E +L  + ++ + G+T      R+   +        +   + P       
Sbjct: 273 ADYNDIMKMTEELLGNIVKDITGGSTKLEIKDRLMDINNEEDIKMLEKFFKEPIPRPFNS 332

Query: 297 -----IIMHNVTEHFVHSE-------FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                +I  + TE   + +        ++F+  ++       +  P K      A  ++ 
Sbjct: 333 VECSKVIEKHCTELNYYYDGNNEKAMKKLFADFVTEKKMVLDFTAPFKRISYVHALEEKF 392

Query: 345 NEWARS--QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            E       G   LA++  +                          ++ +         I
Sbjct: 393 GEKIPRPLDGPEALAFLKKQ-------------------------AIKFNA--------I 419

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
             +P                   +I  +  +  ++ D P         ++      +   
Sbjct: 420 CSEPQTTARVMDKLFG------DLIENDLVQPTFVCDQP---------QLMSPLAKYHRS 464

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           +  +              +++L     EIA+     +   V    F      K   ++  
Sbjct: 465 EPEL------------TERFELFILKREIANAYTELNNPIVQRSNFEQQAKDKAAGDDEA 512

Query: 523 GG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                    A +   PP GG   GIDR+ MLL    N++EV LFP  +
Sbjct: 513 QLVDEVFLDAIEHAFPPTGGWGLGIDRLSMLLADVDNIKEVILFPTMR 560


>gi|184157279|ref|YP_001845618.1| lysyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|332872864|ref|ZP_08440828.1| lysine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|183208873|gb|ACC56271.1| Lysyl-tRNA synthetase (class II) [Acinetobacter baumannii ACICU]
 gi|322507164|gb|ADX02618.1| Lysyl-tRNA synthetase [Acinetobacter baumannii 1656-2]
 gi|323517143|gb|ADX91524.1| lysyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332738875|gb|EGJ69738.1| lysine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 520

 Score =  234 bits (597), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 99/581 (17%), Positives = 186/581 (32%), Gaps = 138/581 (23%)

Query: 4   YRTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL                   V+++G V   R      F+ I+D  G  Q+  
Sbjct: 58  KREHYAADLQEQFKDQSKEQIESAEHVYVKVAGRVMLNRGS----FMVIQDMTGRIQLYV 113

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +      +  ++++   +  I       +AE        G + +  +  E+L+ +   PL
Sbjct: 114 DRKGLPKDTLETIKGLDLGDI------IAAEGYIGRSGKGDLYVHLEGFELLTKSLR-PL 166

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA 171
           P          ++++ R+LDL  +   +     R +++  +R  +  E F+E  TP++  
Sbjct: 167 PDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHV 226

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   
Sbjct: 227 IPGGASARPFETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHN 285

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  ++   ++ +  D++   EN+L  +  +      V               Y  + 
Sbjct: 286 P-EFTMIEFYQAYADYKDLMALTENMLEKLAIDILGTTDVP--------------YQGEV 330

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
              + P    ++           F  IL  NP +           G+R F          
Sbjct: 331 FSFKGPFKKISM-----------FDAILENNPQF------TPENVGDREF---------- 363

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC 410
                                   +AK +     E ++    +    +  F      K  
Sbjct: 364 ------------------------LAKFVREELKEEVKPGFGLGKLQTIVFEETVETKLR 399

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                                    +I ++P               +P          + 
Sbjct: 400 Q----------------------PTFITEYP------------AETSPLARRNDDNPHIT 425

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----Y 526
                     +++    G E+A+G    +      + F      K+  ++          
Sbjct: 426 D---------RFEFFIGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDEAMHYDAEFV 476

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            A + G+PP  G   GIDR+VML   A ++R+V LFP  + 
Sbjct: 477 EALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFPHMRR 517


>gi|300866148|ref|ZP_07110869.1| lysyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300335860|emb|CBN56029.1| lysyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 518

 Score =  233 bits (595), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 111/586 (18%), Positives = 199/586 (33%), Gaps = 119/586 (20%)

Query: 5   RTHSCGDLGV--SDVGSFV------------RLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           R+H+  D+    S  G  +            R+ G +   R  G I F+D++D     Q+
Sbjct: 31  RSHTAKDVHELFSQPGKELQNGETDPEEISLRVCGRITSKRDSGSICFIDLKDFSDKIQL 90

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
                    E   S +    L   G  +    E I      G++ +  +++++LS A  +
Sbjct: 91  KIEKKIVTGESGLSFKQVQKLLDVGDFVGV--EGIGCRTPRGELSILVRELKVLSKA-TI 147

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL 169
             P          I  ++R +DL  +    +    R+RI+ S+R  +   +F E  TP L
Sbjct: 148 QFPDAYYGVNDPEICRRHREMDLAGNQASFHRFALRSRILQSIRSYLWKADFYEIETPTL 207

Query: 170 TAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            A      AR F+          Y L  AP+ + +  +  GFDR F++   FR+E   S 
Sbjct: 208 QAIYGGAAARPFITHHNALDVDLY-LRIAPELFLKRAICGGFDRVFELGRVFRNEGVDST 266

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  L++  S+ +                            F  +   + +  Y  
Sbjct: 267 HNP-EFTSLEVYQSYADY---------------------------FDILTVVEDVMCYAA 298

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           +        I  ++ E     E     +       Y        G  G       M E  
Sbjct: 299 N-------AIFGDIKEIENQGEIISLERKFDYTHTY-------PGFNGKHWQVKTMVEAV 344

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
           + + Q  L +    L+E+  +A    +  HL+ +  +++        G   + I    + 
Sbjct: 345 KDETQ--LDFESLSLEEA--IASAQKLELHLSKLEKQSL--------GYVLYAIFDKVVV 392

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                                   +  +I+DFP      E   +   H            
Sbjct: 393 --------------------PKLIQPTFIIDFPV-----EVSPLAKGHR----------- 416

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GG 524
                       +++L  NG E ++G    +  +   + F      K+  ++        
Sbjct: 417 -----SKPGFVERFELFINGTEYSNGFSELNDPKEQRKRFEEQLAQKDAGDDEAHPMDED 471

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             +A   GMP   G+  GIDR+VMLL   +++R+V +FP  +   D
Sbjct: 472 FIQALSLGMPNCAGMGIGIDRLVMLLTNTQSIRDVVMFPTMRPVKD 517


>gi|218191199|gb|EEC73626.1| hypothetical protein OsI_08130 [Oryza sativa Indica Group]
          Length = 603

 Score =  233 bits (595), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 104/596 (17%), Positives = 213/596 (35%), Gaps = 72/596 (12%)

Query: 5   RTHSCGDLGVS----DVGSF-----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           RTH+  +L       + G       V ++G +   R  G ++F+ +RD  G  Q+    D
Sbjct: 37  RTHTTKELQDGYTHLENGEVCADVAVSIAGRIVARRAFGKLVFMTVRDDSGTIQLYCEKD 96

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           S   E  + +++   +          A         G++ +  +  EIL+ +  LPLP  
Sbjct: 97  SLTEEQFEQLKTIIDIG-----DIIGANGSIKKTEKGELSVYVKNFEILTKSL-LPLPDK 150

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSP 174
                    R++ R++D+  +    ++ + R ++++ +R  M +  FIE  TP+L  ++ 
Sbjct: 151 YHGLTDVDKRYRQRYVDMIANPEVADVFRTRAKVVSEIRKTMESFGFIEVETPVLQGAAG 210

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+      Q   Y L  A + + + ++  G ++ ++I   FR+E   +   P E
Sbjct: 211 GAEARPFITHHNSLQRDLY-LRIATELHLKRMLVGGLEKVYEIGRIFRNEGISTRHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN--GNTVSNNFLRICYDDA--------- 282
           F  ++M  ++ + + ++N  E ++                   +R    +A         
Sbjct: 269 FTTIEMYEAYSDYESMMNLAEEIVTRCAMATHGKLRVDYQEYTVRSTQCEASRPGVAMES 328

Query: 283 ------IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
                  R+ G   P +   ++   ++      ++      + +   +    + +     
Sbjct: 329 ATAKAIGRKKGVKTPPVPWLVLTDAISYGHCQCQWLAMGTEICLERPWRRETMHSLVKEA 388

Query: 337 NRAFCDRMNEWARSQGQPGLAY-IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
                +   E    +     A  I    +E+ ++     V   LN    E +     +Q 
Sbjct: 389 TGIDFNSFGE--DLESAKNAARGIKTESNENISLQACSSVGHVLN-EVFETVVESSLVQP 445

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
                F+   P++    A   R +     G+             F  +    E       
Sbjct: 446 ----TFVLDYPVEISPLAKPHRRYA----GLTER----------FELFICGREIG----- 482

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLV---CNGFEIASGGIRNHMSEVMLQAFSNVG 512
            N F+     ++ L       ++  + DLV     G         N     M +   +  
Sbjct: 483 -NAFSELTDPIDQLVFGGFDKLEMQRPDLVNMQKRGRFENQIKQHNAKRAAMTKEVKSTE 541

Query: 513 ISKEVVENRF-----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              E  +  +          + + GMPP  G+  GIDR+VMLL  + ++R+V  FP
Sbjct: 542 GKHEEDDFSYEVTLDEDFLTSLEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFP 597


>gi|261332072|emb|CBH15065.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 541

 Score =  233 bits (594), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 113/554 (20%), Positives = 196/554 (35%), Gaps = 66/554 (11%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R+ G V   R  G + F+ +R     +  V    +      K +  E ++ + G +  + 
Sbjct: 50  RVRGRVENFRVRGKLAFIQLRQPPSHSIQVVAAGAEISHRVKELTPESIVDVIGEI--KP 107

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E    ++     EL A  IE++S A         ++      R   R++D+R       
Sbjct: 108 TERPVTSVSCSNYELHATSIEVVSKAAVPLPFPLHDQNAKLDTRLNNRYIDMRTPLAVAM 167

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           I   +    S R ++++ +F+E  TP +  ++ EG           + +F A  Q+PQ Y
Sbjct: 168 IRLVSAAAQSFRTQLLSRDFVELHTPKIIGTASEGGSALFSLDYFGRQAFLA--QSPQLY 225

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGV 260
           KQ+ +     R F+I P FR E   + R   EF  LD E +  E   ++L+ +E++L G+
Sbjct: 226 KQMAIMGDGMRVFEIGPVFRAEKSLTHRHLTEFTGLDAEFTVDEFYTELLDVLESILCGM 285

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
             +    N    +  R    +            R   I+  V E  +      F    S 
Sbjct: 286 IWKLQTENAEWISQARAALMELDSAEDCGTVVPRREDIVCEVAEEIIAMYNIRFDDAAS- 344

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
                +          +R                              +   GP    + 
Sbjct: 345 ----RIAPSVPTEPSEDRYH--------------------------ARIGTSGPKVLRMT 374

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDP--LKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
             +   +    D Q       +AG+        F  +    + +   +I        +++
Sbjct: 375 FRDALQLIRDNDHQHAGRQQEVAGESDGEVVVDFNLNQERALGE---LIRLRYGVDLYVV 431

Query: 439 D-FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           D FP             A   +TMP    E           A  +D+   G EI SGG R
Sbjct: 432 DQFPL-----------AARPFYTMPHPSEE---------GVACGFDMYLRGEEICSGGQR 471

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            H    ++ +     +    + +       +F+ G  PHGG   G++RIV+ LLGA+++R
Sbjct: 472 IHDVAQLIHSMEQRRMEAAHMRD----YVDSFRYGAWPHGGFGLGLERIVLFLLGARDIR 527

Query: 558 EVSLFPMSQNFCDL 571
            VSLFP        
Sbjct: 528 RVSLFPRDPRRLAP 541


>gi|195058964|ref|XP_001995535.1| GH17710 [Drosophila grimshawi]
 gi|193896321|gb|EDV95187.1| GH17710 [Drosophila grimshawi]
          Length = 582

 Score =  233 bits (593), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 98/569 (17%), Positives = 183/569 (32%), Gaps = 111/569 (19%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
            ++G +H +R  G  +IF D+R      QV+A+  S   E+A     +      G ++  
Sbjct: 116 SVAGRIHAIRESGAKLIFYDLRGEGVKLQVMASAKSYKNEMA--FEQDTAKLRRGDIIGV 173

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLH 139
           +          G++ +   ++++LS      LP        +  R++ R+LDL   + + 
Sbjct: 174 NG--HPGKTKKGELSIMPTELKLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNNKVR 230

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
           +    R +II+ +R  +    F+E  TP++   +    A+ F+      +   + +  AP
Sbjct: 231 ETFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNELKMDLF-MRIAP 289

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ 
Sbjct: 290 ELYHKMLVVGGLDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYMAYADYHDVIELTEQMVS 348

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
           G+ +       +               Y  D PD                    +  ++ 
Sbjct: 349 GMVKAIHGSYKIK--------------YHPDGPD-------------------GIEQELD 375

Query: 319 SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKH 378
              P   V  I          F                                 P A  
Sbjct: 376 FTPPFKRVSMIKTLEEKLQVKF---------------------------------PSADT 402

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
            N   T     +L  +           P                    I   C    +I 
Sbjct: 403 FNSQETNEFLSQLCAKH----QVECPAPRTTARLLDKLVG------DFIEETCINPTFIC 452

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D                 +P  M             +     +++L     E+ +     
Sbjct: 453 D-----------------HPQIMSPLAKYHRS----MPGLTERFELFVAKKEVCNAYTEL 491

Query: 499 HMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +   V  + F      K   ++           A + G+PP GG   GIDR+ M L  + 
Sbjct: 492 NDPVVQRERFEQQANDKAAGDDEAQMVDENFCTALEYGLPPTGGWGMGIDRLTMFLTDSN 551

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
           N++EV LFP  +        + +   V+Q
Sbjct: 552 NIKEVLLFPAMKPEEANRTPAANATEVQQ 580


>gi|261403378|ref|YP_003247602.1| aspartyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261370371|gb|ACX73120.1| aspartyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 434

 Score =  232 bits (592), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 102/327 (31%), Positives = 152/327 (46%), Gaps = 25/327 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M   RTH   ++     G  V + GWVH +R  G IIF+ +RD  G  Q+VA       E
Sbjct: 1   MKWRRTHYSAEIKPEMDGQEVVIMGWVHSIRALGKIIFVILRDREGTVQIVAPKQKVGEE 60

Query: 61  IAKSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFG 116
           + K ++    E V+ I G V++      N     G  E+   ++E+L+ A+  LPL    
Sbjct: 61  LFKQIKKLGAEDVVAIKGKVIA------NEKAPNG-FEILPLELEVLNTAQRPLPLDPAE 113

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           +       R + RFLDLRR  +      R+ ++ S+R  +  E FIE +TP L AS  EG
Sbjct: 114 KVPAELDTRLENRFLDLRRPKVQAVFKIRSEMLKSVRNTLYNEGFIEVNTPKLVASCTEG 173

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +    S   + +F  L Q+PQ YKQ+LMASG DR F+IAP FR E+  + R   E   
Sbjct: 174 GTELFPISYFEKEAF--LGQSPQLYKQMLMASGLDRVFEIAPIFRAEEHNTRRHLNEATS 231

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIR 284
           +D+EM+F +  D ++ +E V+   F +                   S  F RI YD+AI 
Sbjct: 232 IDIEMAFADDKDAMDILEKVVYNAFLDVYENRKREIDVLGIEFELPSKKFDRITYDEAID 291

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEF 311
                  ++     +    E  +  E 
Sbjct: 292 IANAKGVEISWGEDLSREAEKAIGEEM 318



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 31/157 (19%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           +A   I +E+G          +I D+P                PF             + 
Sbjct: 309 EAEKAIGEEMG-------GLYFITDWP------------SEIRPFYTMPRED------NP 343

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
              KA  +DL+    EI+SG  R H+ +++++     G++     + F     AF+ GMP
Sbjct: 344 NICKA--FDLMYKDLEISSGAQRIHLYDLLVENIKKKGLNP----DGFTYYLEAFKYGMP 397

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PH G   G DR  M+L   +N+RE  LFP  +     
Sbjct: 398 PHAGWGLGADRFTMILTQQENIRECVLFPRDRQRLTP 434


>gi|255562232|ref|XP_002522124.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223538723|gb|EEF40324.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 206

 Score =  231 bits (590), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 74/208 (35%), Positives = 103/208 (49%), Gaps = 4/208 (1%)

Query: 383 NTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPF 442
             E +  R     GD   F  G            R  IA E+ +I+ +     W  DF  
Sbjct: 2   KKEELLRRCSAGPGDLILFAVGHYASVNKTLDRLRMFIANEICLIHHSRNSILWETDFLM 61

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +EWN+ E++++  H+PFT P          DL S +A  YD+V NG EI  G +R +  E
Sbjct: 62  FEWNDTEQRLEALHHPFTAPNPEDM----EDLSSARALAYDMVYNGVEIGGGSLRIYKRE 117

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +  +    VGIS E  E +FG L  A   G PPHGGIA G+DR+VMLL  A ++R+V  F
Sbjct: 118 IQQKVLEIVGISAEQAEEKFGYLLEALDMGAPPHGGIAYGLDRLVMLLADANSIRDVIAF 177

Query: 563 PMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           P +      L  +PS V  +QL++L   
Sbjct: 178 PKTTTAQCALTRAPSEVGPQQLKDLSFN 205


>gi|255281438|ref|ZP_05345993.1| lysine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255267926|gb|EET61131.1| lysine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 649

 Score =  231 bits (589), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 73/355 (20%), Positives = 141/355 (39%), Gaps = 30/355 (8%)

Query: 5   RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH   D+        G  V L+G +   R  G   F +I+D  G  Q     DS   E 
Sbjct: 45  RTHHSQDIREHFEELEGKTVTLAGRMMSKRVMGKASFCNIQDLKGNIQSYVARDSIGEEE 104

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K+ +   +  I G+      +       TG+I + A ++ +LS + ++ LP        
Sbjct: 105 YKAFKKMDIGDIVGI------KGEVFKTKTGEISIHASEVTLLSKSLQI-LPEKFHGLTN 157

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
             +R++ R++DL  +   K+  VKR+RII+++R  +  + F+E  TP+L  ++   A   
Sbjct: 158 TDLRYRQRYVDLIMNPEVKDTFVKRSRIISAIRRYLDGQGFMEVETPMLVQNAGGAAARP 217

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                        L  + + Y + L+  G ++ ++I   FR+E   +   P EF  +++ 
Sbjct: 218 FETHFNALNEDLKLRISLELYLKRLIVGGLEKVYEIGRVFRNEGLDTRHNP-EFTLMELY 276

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ + + +++  EN+ R V +E      +  N + +              DL  P    
Sbjct: 277 QAYTDYNGMMDLTENLYRYVAQEVLGTTKIVYNGVEM--------------DLGKPFERI 322

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN----EWARSQ 351
            + +         F++I ++                     D +N    E+A   
Sbjct: 323 TMVDAVKKYAGVDFNEIHTLEEARAAAKEHHVEYEERHKKGDILNLFFEEFAEEH 377



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F M     +  L      + +   +++   NG+E+A+     +
Sbjct: 369 FFEEFAEEHMIQPT---FVMDHPIEISPLTKKKPENPEYVERFEFFMNGWEMANAYSELN 425

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F                       A + GMPP GGI  GIDR+ MLL  ++ 
Sbjct: 426 DPIDQRERFKEQEAQLAQGNEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTDSQA 485

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  ++
Sbjct: 486 IRDVLLFPTMKS 497


>gi|300933244|ref|ZP_07148500.1| lysyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 1113

 Score =  229 bits (585), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 111/589 (18%), Positives = 201/589 (34%), Gaps = 125/589 (21%)

Query: 2    HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---- 57
            H   TH+CG++      +   +SG V   R  GG++FLDI+D  G+ QV+   D      
Sbjct: 620  HPRPTHTCGEVANLAEHTEATISGRVMARRFFGGVLFLDIQDSTGVAQVIVERDHFTGAP 679

Query: 58   ---------------CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIE 102
                             ++  +V    ++ + G         +      G   L A ++ 
Sbjct: 680  AGSSLDTDATLGRNRLEQLESAVDLADLVRVTG---------VAGKSRKGHPSLLAHEVN 730

Query: 103  ILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENF 161
            + + +   PLP   +       R + R LD+  +  + +++  R+ ++N+MR  ++  ++
Sbjct: 731  LEAKSL-HPLPDKRKGLQNPETRLRNRHLDMTLNPGVMQSLRTRSAVLNAMRSELVQRDY 789

Query: 162  IECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
            +E  TPIL        AR F           Y L  AP+ Y + LM  G  + F++   F
Sbjct: 790  LEVETPILQPIHGGANARPFRTYINAYDMDLY-LRIAPELYLKRLMCGGAPKVFELGRDF 848

Query: 221  RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
            R+E   +   P EF  L+   +  +   +++    ++                       
Sbjct: 849  RNEGADNKHNP-EFTVLEAYEAHGDYRTMMDLTRRLICAAATAVHG-------------- 893

Query: 281  DAIRRYGTDKPDLRNPI--IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
                     +P +R+P    + +++      E+ V S I S+N      A+ + G     
Sbjct: 894  ---------QPVIRDPRSGELVDIS-----GEWPVRSVIGSINEALAQRALASTGQTSRT 939

Query: 339  AFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398
            A  +   E A                          +    +I     I   + +     
Sbjct: 940  ASHESDTEIA----------------------PCTTIGLDTDIDQLRKIAETVGLHP--- 974

Query: 399  CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
                     +           I  EL  +        + +DFP             + +P
Sbjct: 975  ---------QAAWDEGKIIEEIYGEL--VEDTTTLPTFYIDFP------------ASVSP 1011

Query: 459  FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----S 514
             T P     +L           ++DLV  G E+ +         +  +      +     
Sbjct: 1012 LTRPHPENPNL---------CQRWDLVAFGMELGTAYSELTDPLLQRERLEQQSLLAAGG 1062

Query: 515  KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                        RA + GMPP GG+  GIDRI+ML+ G  ++RE   FP
Sbjct: 1063 DAEAMEVDEDFLRALEFGMPPAGGLGLGIDRIIMLING-GSMRENLAFP 1110


>gi|255527651|ref|ZP_05394511.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296186916|ref|ZP_06855317.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255508664|gb|EET85044.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048630|gb|EFG88063.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 502

 Score =  229 bits (585), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 79/345 (22%), Positives = 142/345 (41%), Gaps = 25/345 (7%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH    +        G  V ++G +   R HG   F D+ D YG  Q+    +    E 
Sbjct: 44  RTHVSSQIKDNYEELEGKSVTVAGRLMSKRVHGKAGFSDLHDRYGKIQLYIKINDVGEER 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  +S  +    G ++S +         TG++ L   + E+L+ +   PLP        
Sbjct: 104 LKEYKSFDI----GDILSITGNVF--KTKTGEVTLHITEFELLAKSLR-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
             +R++ R++DL  +  +    +KRT+II ++R  +  + ++E  TPIL T +    A+ 
Sbjct: 157 PDLRYRQRYVDLIVNQDVKDTFIKRTKIIKAIRTFLDDKEYLEVETPILSTIAGGAAAKP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+  GF+R ++I   FR+E       P EF  +++
Sbjct: 217 FITHHNALSLDMY-LRIATELYLKRLIVGGFERVYEIGRNFRNEGMDVRHNP-EFTCMEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             +F + +D++   EN++  V E+      V+     I +    RR           I M
Sbjct: 275 YQAFADYNDMMELTENMVAFVCEKVLGTTKVTYEDTEIDFTPPWRR-----------ITM 323

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            +  + +   +F V S         +   I  K    +    D +
Sbjct: 324 VDAVKEYTGVDFNVISDDEEARGIAKEKHINMKKQLKDCTKGDIL 368


>gi|169806644|ref|XP_001828066.1| lysyl-tRNA synthetase, mitochondrial [Enterocytozoon bieneusi H348]
 gi|263511619|sp|A9CS74|SYKC_ENTBH RecName: Full=Probable lysyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|161779194|gb|EDQ31218.1| lysyl-tRNA synthetase, mitochondrial [Enterocytozoon bieneusi H348]
          Length = 518

 Score =  229 bits (584), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 102/557 (18%), Positives = 186/557 (33%), Gaps = 107/557 (19%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
                   V L G V R R H    F D++      Q+V N +    E   +++    + 
Sbjct: 56  SNEKTNISVELVGRVIRARIHSMTNFYDVKKDNDELQIVYNKNLQGKENPIAIKIVDCIR 115

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
              ++     + I     TG+I + A +I+ILS       P          + +++R +D
Sbjct: 116 RGDII---GFKGIVGRTKTGEISVFAHEIQILSPCLR-AFPSEKNLITNPELIYRHRHID 171

Query: 133 LRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGS 190
           L  +   +N    R++II  +R       F+E  TPI+        AR FL      +  
Sbjct: 172 LLVNQDSRNRFITRSKIIQHIREYFNKIGFLEVETPIMNNKVGGASARPFLTHHNELKID 231

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ + + L+  G +R F+I   FR+E       P EF  ++  M++ + +D++
Sbjct: 232 LY-LRVAPELFLKQLVVGGLERVFEIGKNFRNEGIDLTHNP-EFTAIEFYMAYADYNDLM 289

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
             +E +L G+ +     +                        +  P     + E  V  +
Sbjct: 290 CIVEELLSGLVKLIKGSSKF----------------------IYQPCKRETIDEIKVPLD 327

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
           F                              D + E  +S            ++ +G   
Sbjct: 328 F-----------------------STPFKRIDILEELNKS----------LNIELTGEN- 353

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
               + K   +         L+         I  +P             I +    I   
Sbjct: 354 ----IEKPETLELLIKKAEELN--------IIVNNPKTLNRMLDA---FIGE---YIEPQ 395

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
           C    ++  FP                            K +   +    ++++ CNG E
Sbjct: 396 CINPTFVTGFPI---------------------CMSPLAKDHRSKAGITERFEMFCNGKE 434

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRI 546
           + +     ++ ++  + F          ++          +  + G+PP GG   GIDR+
Sbjct: 435 LVNAYTELNIPDLQRKRFLMQDADANAGDDEAMPNDEDFCQVLEYGLPPTGGCGIGIDRL 494

Query: 547 VMLLLGAKNVREVSLFP 563
           VM L  A N+R+V LFP
Sbjct: 495 VMYLTDAANIRDVILFP 511


>gi|27904870|ref|NP_777996.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|31077002|sp|Q89AC5|SYK_BUCBP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|27904268|gb|AAO27101.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 500

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 100/576 (17%), Positives = 191/576 (33%), Gaps = 133/576 (23%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            RY+ ++   L    +   V ++G +   R  G   F  ++D  G  Q+    +      
Sbjct: 38  QRYKDYTRDQLFSLKI--CVSVAGRMTNKRIMGKSSFFILKDFEGEIQLYIQENLFALNF 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K    +W L   G ++    +       TG++ +   +I++L+ A + PLP        
Sbjct: 96  YKQFVKKWDL---GDILGAKGKLF--KTRTGELSIHCTEIKLLTKALK-PLPSKFHGLSD 149

Query: 122 ESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R++ R+LDL  + TL      R+ I  ++R  M+ + F+E  TP++        AR 
Sbjct: 150 QETRYRQRYLDLISNRTLCSIFKIRSLIFINIRKYMLKKKFLEVETPMMQNIPGGASARP 209

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+      +   Y L  +P+ Y + L+  GF++ F+I   FR+E   +   P EF     
Sbjct: 210 FITHHNTLEIDLY-LRISPELYLKRLIVGGFNKIFEINKSFRNEGISTRHNP-EFT---- 263

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
                    ++                               A   Y     +    ++M
Sbjct: 264 ---------MMEV---------------------------YMAYSNYHDMM-NFTEKLLM 286

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
             V E                             G         + ++ +   +  L   
Sbjct: 287 FLVKEIV---------------------------GNSQVKHGTNIIDFKKKFFRCTLKEA 319

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
             + + S  ++ +    K   IV    I V+  +  G     I                 
Sbjct: 320 ILKYNPSIRLSDLNDEVKMNKIVKKLGINVKKKLNAGQLILEIFNKT------------- 366

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
                  +     +  +I+D+P               +P +           +D+     
Sbjct: 367 -------VEKKLIQPTFILDYP------------VEVSPLSRR---------SDVNKNVV 398

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN------------RFGGLYR 527
            +++L  +G+EI +G    + ++   + F         + N                   
Sbjct: 399 DRFELFISGYEIGNGFSELNDADDQKKRFLMQCKLSHNINNLNKISSFDKHILYDSDYIT 458

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G+  GIDR+ MLL   K++R+V  FP
Sbjct: 459 ALEYGLPPTSGLGIGIDRLTMLLTNQKSIRDVIFFP 494


>gi|260893493|ref|YP_003239590.1| lysyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865634|gb|ACX52740.1| lysyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 489

 Score =  229 bits (583), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 68/288 (23%), Positives = 126/288 (43%), Gaps = 15/288 (5%)

Query: 3   RY-RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           RY RTH   ++        G  V L+G +   R HG + F D++D  G  Q++   D+  
Sbjct: 33  RYERTHLAEEVRERFSELEGQEVSLAGRIMARRSHGKVTFADLQDFSGRIQIMVRQDAVG 92

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E  +  +   +  I G+      +       TG+I ++  + E+L+ +   PLP     
Sbjct: 93  PEAYEIFKKLDLGDIIGV------KGSVFKTRTGEITIAVARFELLAKSLR-PLPEKWHG 145

Query: 119 EYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                +R++ R+LDL     + +  + R++II ++R  +    F+E  TP++        
Sbjct: 146 LKDVDLRYRQRYLDLIVNPEVKRIFILRSQIIRAIRRFLDERGFLEVETPMMQPVPGGAA 205

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+      +   Y L  AP+ Y + L+  GF++ ++I   FR+E   +   P EF  
Sbjct: 206 ARPFITYHNALEMQLY-LRIAPELYLKRLLVGGFEKVYEINRNFRNEGISTRHNP-EFTM 263

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           L++  ++ +  D+L   E ++  V +E      +      I      R
Sbjct: 264 LELYQAYADYQDMLKLTEELITWVAKEVLGTWQIKYGEAEIDLSPPWR 311



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 27/154 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            +  N + +EL  +        +++D+P                        +   K  D
Sbjct: 353 GEIVNEVFEEL--VEPELINPTFVLDYPV-------------------DISPLAKRKKED 391

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
                 ++++L   G EIA+     +      + F      +   +            A 
Sbjct: 392 PR--LTYRFELFIGGREIANAFSELNDPLDQRERFLQQLERRRAGDEEAHMFDEDFLVAL 449

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + GMPP GG+  GIDR+VMLL  + ++REV LFP
Sbjct: 450 EYGMPPAGGLGIGIDRLVMLLTNSPSIREVILFP 483


>gi|167758612|ref|ZP_02430739.1| hypothetical protein CLOSCI_00952 [Clostridium scindens ATCC 35704]
 gi|167663808|gb|EDS07938.1| hypothetical protein CLOSCI_00952 [Clostridium scindens ATCC 35704]
          Length = 656

 Score =  228 bits (582), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 67/316 (21%), Positives = 138/316 (43%), Gaps = 22/316 (6%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           T    ++     +  G  V ++G + + R  G   F +I D  G  Q     DS   +  
Sbjct: 49  TAHAAEIKDNYETMEGKQVSVAGRIMQKRVMGKASFCNILDQSGNIQSYVARDSVGEDSY 108

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  +   +  I G+      E       TG+I + A  + +LS + ++ LP         
Sbjct: 109 KDFKKLDIGDIVGI------EGEVFKTKTGEISIHASAVNLLSKSLQI-LPEKYHGLTNT 161

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +T  ++  +KR+RI++++R  +  + F+E  TP+L +++   A    
Sbjct: 162 DMRYRQRYVDLIMNTESRDTFIKRSRIVSAIRRYLDGQGFLEVETPMLVSNAGGAAARPF 221

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     + L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 222 ETHFNALDEDFKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQ 280

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKP 291
           ++ + + +++  EN+ R V +E      ++ N         F RI   DA+++Y G D  
Sbjct: 281 AYTDYNGMMDLTENLYRHVAQEVLGTTIITYNGVEMDLGKPFERITMIDAVKKYAGVDWN 340

Query: 292 DLRNPIIMHNVTEHFV 307
           ++        + +   
Sbjct: 341 EVSTLEEARALADKHH 356



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 11/133 (8%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   EE  I       +P  +    +   K  D   +   +++   NG+E+A+     
Sbjct: 372 FFEEFAEEHLIQPTFVMDHPIEISP--LTKKKPEDPNYV--ERFEFFMNGWEMANAYSEL 427

Query: 499 HMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      + F          +            A + GMPP GGI  GIDR+ ML+  + 
Sbjct: 428 NDPIDQRERFKAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLMTDSA 487

Query: 555 NVREVSLFPMSQN 567
            +R+V LFP  ++
Sbjct: 488 AIRDVLLFPTMKS 500


>gi|207109199|ref|ZP_03243361.1| aspartyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 219

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 72/230 (31%), Positives = 115/230 (50%), Gaps = 11/230 (4%)

Query: 322 PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNI 381
              +   +       +R+    + E+ R  G  GLAY+  + DE       GP+ K L+ 
Sbjct: 1   KRIKALNVKGADALFSRSTLKELEEFVRQFGAQGLAYLQIKEDE-----IKGPLVKFLSE 55

Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFP 441
              + I  R + Q GD  FF AGD      +    R  +A+ L +I+ +   F W+++FP
Sbjct: 56  KGLKNILERTNAQVGDIVFFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFP 115

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E  E       AH+PFTMP+     ++  D+  ++A  YD+V NG E+  G IR H  
Sbjct: 116 MFEKTE--NGYHAAHHPFTMPKN----IECEDMEEVEAHAYDVVLNGVELGGGSIRIHKE 169

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
           ++  + F  + I++E  + +FG L  A + G PPHGG A G DR++ML+ 
Sbjct: 170 KMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMT 219


>gi|11498525|ref|NP_069753.1| aspartyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3122883|sp|O29342|SYD_ARCFU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2649677|gb|AAB90318.1| aspartyl-tRNA synthetase (aspS) [Archaeoglobus fulgidus DSM 4304]
          Length = 430

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 90/291 (30%), Positives = 146/291 (50%), Gaps = 25/291 (8%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKS 64
              D+     G  V L GWVH VR  GG++F+ +RD  GI Q+           F++AK 
Sbjct: 4   YTADVKPEMEGQKVTLYGWVHEVRDLGGLVFILLRDREGIVQITLPRKFVSKQVFKLAKK 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES 123
           +R E V+ + G V              G +E+  + IE+L+ A+  LPL V  +      
Sbjct: 64  IRRESVIAVTGEVRREEK-------APGGVEIIPESIEVLNEADAPLPLEVTEKVPAELD 116

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +RF+DLRR  +      R +++ S+R  +  E FIE  TP + +++ EG  +    
Sbjct: 117 TRLDHRFMDLRRPRVQAIFRIRHQVMQSVREFLSEEGFIEVHTPKIVSTATEGGTELFPI 176

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           S   + +F  L Q+PQ YKQ+LMA+GF++ F+I P FR E+  + R   E   +D+EMSF
Sbjct: 177 SYFEKEAF--LNQSPQLYKQVLMAAGFEKVFEIGPIFRAEEHNTTRHLNEAISIDIEMSF 234

Query: 244 VEQDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDA 282
            + + +++ +E +++ V+E+ +                    F RI YD+A
Sbjct: 235 TDHNGVMDVLERLVQRVYEDVAEKCERYLGWLEVSLEIPELPFPRITYDEA 285



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 24/145 (16%)

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++        +I D+P      E K       PF                   +  +D
Sbjct: 307 LKLVGEEMGGLYFITDWP-----TESK-------PFYAMPYED--------RPEISKSFD 346

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+    E++SG  R H+ ++++++    G+        FG    AF+ GMPPH G   G 
Sbjct: 347 LMHGWLELSSGAQRIHLYDMLVESIKAKGMEP----ESFGFYLEAFRYGMPPHAGWGLGA 402

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNF 568
           +R++M +LG KNVRE  LFP  ++ 
Sbjct: 403 ERLIMSMLGLKNVREAVLFPRDRHR 427


>gi|15669750|ref|NP_248563.1| aspartyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2500972|sp|Q58950|SYD_METJA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|1592183|gb|AAB99575.1| aspartyl-tRNA synthetase (aspS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 438

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 99/328 (30%), Positives = 151/328 (46%), Gaps = 25/328 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M   RTH   D+     G  V + GWVH +R  G IIF+ +RD  G  Q+VA       E
Sbjct: 5   MKWRRTHYSADIKPEMDGQEVIIMGWVHSIRALGKIIFVILRDREGTVQIVAPKQKVGDE 64

Query: 61  IA---KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFG 116
           +    K + +E V+ + G V++      N     G  E+   ++E+++ A+  LPL    
Sbjct: 65  LFSQIKKLGAEDVIAVKGKVIA------NEKAPNG-FEILPLELEVINTAKRPLPLDPAE 117

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           +       R + RFLDLRR  +      R+ ++ S+R  +  E FIE +TP L AS  EG
Sbjct: 118 KVPAELDTRLENRFLDLRRPKVQAIFKIRSEMLKSVRNTLYNEGFIEVNTPKLVASCTEG 177

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +    S   + +F  L Q+PQ YKQ+LMA+G DR F+IAP FR E+  + R   E   
Sbjct: 178 GTELFPISYFEREAF--LGQSPQLYKQMLMATGLDRVFEIAPIFRAEEHNTRRHLNEATS 235

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIR 284
           +D+EM+F +  D ++ +E V+   F +                      F RI YD+AI 
Sbjct: 236 IDIEMAFADDKDAMDILEKVVYNAFVDVYENRKKEIETLGIEFELPPEKFDRITYDEAID 295

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
                  ++     +    E  +  E  
Sbjct: 296 IANAKGVEISWGEDLSREAEKAIGEEME 323



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 80/217 (36%), Gaps = 39/217 (17%)

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIR--VRLDMQDGDSCFFIAGDPLKFCSFAA 414
           A++    +    +  +G +   L     + I     +D+ +        G+       + 
Sbjct: 259 AFVDVYENRKKEIETLG-IEFELPPEKFDRITYDEAIDIANAKGVEISWGE-----DLSR 312

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           +A   I +E+           +I D+P                PF             + 
Sbjct: 313 EAEKAIGEEME-------GLYFITDWP------------SEIRPFYTMPDE------KNP 347

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
              KA  +DL+    EI+SG  R H+ +++++     G++     + F     AF+ GMP
Sbjct: 348 NICKA--FDLMYKDLEISSGAQRIHLYDLLVENIKKKGLNP----DGFTYYLEAFKYGMP 401

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PH G   G DR  M+L   +N+RE  LFP  +     
Sbjct: 402 PHAGWGLGADRFTMVLTQQENIRECVLFPRDRQRLTP 438


>gi|317500712|ref|ZP_07958930.1| lysyl-tRNA synthetase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|316897906|gb|EFV19959.1| lysyl-tRNA synthetase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 642

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 71/325 (21%), Positives = 137/325 (42%), Gaps = 22/325 (6%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   ++        G  V ++G +   R  G   F +++D  G  Q     DS   E  
Sbjct: 43  THHSVEVKENYEELEGKQVSIAGRMMSKRVMGKASFCNVQDLKGNIQSYVARDSIGEENY 102

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  +   V  + G+      E       TG+I + A  + +LS + ++ LP         
Sbjct: 103 KEFKKLDVGDVIGI------EGEVFKTKTGEISIHASHVTLLSKSLQI-LPEKFHGLTNT 155

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +   K+  +KR++II+++R  +  E F+E  TP+L A++   A    
Sbjct: 156 DMRYRQRYVDLIMNPEAKDTFIKRSKIISAIRRYLDGEGFMEVETPMLVANAGGAAARPF 215

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 216 ETHFNALNEDLKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQ 274

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKP 291
           ++ + + +++  EN+ R V +E      +  N         F RI   DA+++Y G D  
Sbjct: 275 AYTDYNGMMDLTENLYRHVAQEVLGTTKIVYNGVEMDLGKPFERITMVDAVKKYAGVDWN 334

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSK 316
           +++       + +           K
Sbjct: 335 EVKTLEEARKLADEHHVEYEEHHKK 359



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 11/136 (8%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F M     +  L      + +   +++   NG+E+A+     +
Sbjct: 366 FFEEFAEEHLIQPT---FVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAYSELN 422

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F          +            A + GMPP GGI  GIDR+ MLL  +  
Sbjct: 423 DPIDQRERFKAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTNSAA 482

Query: 556 VREVSLFP--MSQNFC 569
           +R+V LFP   +Q   
Sbjct: 483 IRDVLLFPTMKTQGGA 498


>gi|331089813|ref|ZP_08338706.1| hypothetical protein HMPREF1025_02289 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330403510|gb|EGG83068.1| hypothetical protein HMPREF1025_02289 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 642

 Score =  228 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 71/325 (21%), Positives = 137/325 (42%), Gaps = 22/325 (6%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   ++        G  V ++G +   R  G   F +++D  G  Q     DS   E  
Sbjct: 43  THHSVEVKENYEELEGKQVSIAGRMMSKRVMGKASFCNVQDLKGNIQSYVARDSIGEENY 102

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  +   V  + G+      E       TG+I + A  + +LS + ++ LP         
Sbjct: 103 KEFKKLDVGDVIGI------EGEVFKTKTGEISIHASHVTLLSKSLQI-LPEKFHGLTNT 155

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +   K+  +KR++II+++R  +  E F+E  TP+L A++   A    
Sbjct: 156 DMRYRQRYVDLIMNPEAKDTFIKRSKIISAIRRYLDGEGFMEVETPMLVANAGGAAARPF 215

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 216 ETHFNALNEDLKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQ 274

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKP 291
           ++ + + +++  EN+ R V +E      +  N         F RI   DA+++Y G D  
Sbjct: 275 AYTDYNGMMDLTENLYRHVAQEVLGTTKIVYNGVEMDLGKPFERITMVDAVKKYAGVDWN 334

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSK 316
           +++       + +           K
Sbjct: 335 EVKTLEEARKLADEHHVEYEEHHKK 359



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 11/136 (8%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F M     +  L      + +   +++   NG+E+A+     +
Sbjct: 366 FFEEFAEEHLIQPT---FVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAYSELN 422

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F          +            A + GMPP GGI  GIDR+ MLL  +  
Sbjct: 423 DPIDQRERFKAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTDSAA 482

Query: 556 VREVSLFP--MSQNFC 569
           +R+V LFP   +Q   
Sbjct: 483 IRDVLLFPTMKTQGGA 498


>gi|291336621|gb|ADD96167.1| hypothetical protein [uncultured organism MedDCM-OCT-S05-C185]
          Length = 205

 Score =  228 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 111/198 (56%), Positives = 138/198 (69%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+C +L   +VG   RLSGW+HR R HG ++FLD+RDHYGITQ V + +   F 
Sbjct: 1   MHRYRTHNCNELRPENVGETARLSGWIHRRRDHGQLVFLDLRDHYGITQCVVDIEDKSFS 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + VR E V+ I G V+ R  ETIN  I TG IEL     EI S A+ +PL V  E + 
Sbjct: 61  DVEKVRVESVVTITGQVLRRDEETINPKIPTGHIELRIDTFEIQSSADLVPLQVNSEEDA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +YRFLDLRR+ +H NI+ R+ +I+S+R RMI   F+E  TPILTASSPEGARDF
Sbjct: 121 GEELRLRYRFLDLRRERIHNNIITRSNVISSIRRRMIDRGFVEFQTPILTASSPEGARDF 180

Query: 181 LVPSRVNQGSFYALPQAP 198
           LVPSR++ G FYALPQAP
Sbjct: 181 LVPSRLHPGKFYALPQAP 198


>gi|225572779|ref|ZP_03781534.1| hypothetical protein RUMHYD_00970 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039836|gb|EEG50082.1| hypothetical protein RUMHYD_00970 [Blautia hydrogenotrophica DSM
           10507]
          Length = 651

 Score =  228 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 139/354 (39%), Gaps = 30/354 (8%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   D+        G  V ++G +   R  G   F  ++D  G  Q     DS   E  
Sbjct: 44  THHSEDIREQFQELEGKTVSVAGRMMSKRVMGKASFCHVQDLRGQIQSYVARDSLGEEAY 103

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  +   V  I G+      +       TG+I + A ++ +LS + +  LP         
Sbjct: 104 KEFKKMDVGDIVGI------KGEVFRTKTGEISIHAAEVTLLSKSLQ-VLPEKYHGLTNT 156

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R+ DL  +   K+  +KR++II+S+R  + A+ F+E  TP+L A++   A    
Sbjct: 157 DLRYRQRYTDLIMNPEVKDTFIKRSKIISSIRKYLDAQGFMEVETPMLVANAGGAAARPF 216

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     + L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 217 ETHFNALDEDFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQ 275

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +   +++  EN+ R V +E      ++ N + +              DL  P     
Sbjct: 276 AYTDYHGMMDLTENLYRHVAQEVLGTTKITYNGIEM--------------DLGKPFERIT 321

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM----NEWARSQ 351
           + +         F++I ++     V               D +     E+A   
Sbjct: 322 MVDAVKKYSGVDFNEIHTLKEARAVAKEHHVEYEERHKKGDILSLFFEEFAEEH 375



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F M     +  L      + +   +++   NG+E+A+     +
Sbjct: 367 FFEEFAEEHLIQPT---FVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAYSELN 423

Query: 500 MSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F          +            A + GMPP GGI  GIDR+ MLL  +  
Sbjct: 424 DPIDQRERFLAQEELLAQGDEEANHTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTNSAA 483

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  ++
Sbjct: 484 IRDVLLFPTMKS 495


>gi|26350423|dbj|BAC38851.1| unnamed protein product [Mus musculus]
          Length = 236

 Score =  228 bits (580), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 71/231 (30%), Positives = 111/231 (48%), Gaps = 9/231 (3%)

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-----IINCNCFEFC 435
                 +   +++Q+ D     AG+  K CS     R   A  L      + +   F F 
Sbjct: 2   EEERLELARSMEIQEEDIVLLTAGEHEKACSLLGKLRLECADLLEMRGAVLRDPAVFSFL 61

Query: 436 WIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
           W++DFP +   EE   +++ AH+PFT P      L   +   ++   YDLV NG EI  G
Sbjct: 62  WVVDFPLFLAKEESPTELESAHHPFTAPNSSDIHLLYTEPEKVRGQHYDLVLNGNEIGGG 121

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +R H +   LQ +    + KE V+     L +A   G PPHGGIA G+DR+V L+ GA 
Sbjct: 122 SVRIHDA--QLQRYILETLLKEDVK-LLSHLLQALDYGAPPHGGIALGLDRLVCLVTGAP 178

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISVTT 605
           ++R+V  FP S    DL+  +P +VS E+L+   + ++       + +  T
Sbjct: 179 SIRDVIAFPKSYRGQDLMSNAPDSVSPEELKPYHIHVLWPADSEEESASAT 229


>gi|260825387|ref|XP_002607648.1| hypothetical protein BRAFLDRAFT_123951 [Branchiostoma floridae]
 gi|229292996|gb|EEN63658.1| hypothetical protein BRAFLDRAFT_123951 [Branchiostoma floridae]
          Length = 454

 Score =  227 bits (578), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 103/553 (18%), Positives = 186/553 (33%), Gaps = 107/553 (19%)

Query: 27  VHRVRPHGGIIFLDI-RDHYGITQVVANPDS----ACFEIAKSVRSEWVLCIDGLVMSRS 81
           +H  R  G   FL + +  + +  +V   D        + A ++  E ++ ++G+V   +
Sbjct: 1   MHTSRAKGKQCFLVLRQQQFNVQALVFVNDKTVSKQMVKFAANITKESIIDVEGVVQKVA 60

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                 +     +EL  ++       E+   P        +  R   R +DLR  T    
Sbjct: 61  --QPVESCTQRDVELHVER-------EDASRPR-----VNQDTRLDNRIIDLRTTTNQAV 106

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
                 + +  R  +  + F+E  TP + +++ EG  +    S     ++ A  Q+PQ Y
Sbjct: 107 YRVVAGVCDLFRATLTGKGFVEIHTPKIISAASEGGANVFTVSYFKNNAYLA--QSPQLY 164

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGV 260
           KQ+ +A+ F++ F +   FR ED  + R   EF  LD+EM+F     ++L+ + ++   +
Sbjct: 165 KQMAIAADFEKVFTVGAVFRAEDSNTHRHLTEFVGLDLEMAFNYHYHEVLDVIGDMFVCI 224

Query: 261 FEEFSNGNTVSNN-FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           F+   +  + +   F+ +  + A   +             H V +        +F  +  
Sbjct: 225 FKGLRDRVSGTGKEFVDLDLEMAFNYH------------YHEVLDVIGDMFVCIFKGLRD 272

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
                             R     +                                  L
Sbjct: 273 RYKTEINTIQKQFPSEPFRFLEPSLR---------------------------------L 299

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
                 A+     ++ GD       D                    ++        +I+D
Sbjct: 300 EFPEAVAMLREAGVEIGDEDDLSTPDE----KLLGK----------LVKAKYDTDFFILD 345

Query: 440 -FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            FP             A  PF            N+     A  YD+   G EI SG  R 
Sbjct: 346 KFPL------------AVRPFYTMPD------PNNPK--YANSYDMYMRGEEILSGAQRI 385

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
           H  E + +      I       +      +F+ G PPHGG   G++R+VML LG  N+R+
Sbjct: 386 HDPEFLTERAKAHEIDI----EKIKSYIDSFRYGCPPHGGGGIGMERVVMLYLGLNNIRK 441

Query: 559 VSLFPMSQNFCDL 571
            S+FP        
Sbjct: 442 TSMFPRDPKRLTP 454


>gi|289192215|ref|YP_003458156.1| aspartyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288938665|gb|ADC69420.1| aspartyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 434

 Score =  227 bits (578), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 96/324 (29%), Positives = 147/324 (45%), Gaps = 19/324 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M   RTH   ++     G  V + GWVH +R  G IIF+ +RD  G  Q+VA       E
Sbjct: 1   MKWRRTHYSAEITPEMDGEEVIVMGWVHSIRALGKIIFVILRDREGTVQIVAPKQKVGDE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGERE 119
           +   ++    L  + ++  R     N     G  E+   ++EI++ A+  LPL    +  
Sbjct: 61  LFSQIKK---LGAEDVIAVRGKVIANEKAPNG-FEILPLELEIINTAKRPLPLDPAEKVP 116

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R + RFLDLRR  +      R+ ++ S+R  +  E FIE +TP L AS  EG  +
Sbjct: 117 AELDTRLENRFLDLRRPKVQAIFKIRSEMLKSVRNTLYNEGFIEVNTPKLVASCTEGGTE 176

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S   + +F  L Q+PQ YKQ+LMA+G DR F+IAP FR E+  + R   E   +D+
Sbjct: 177 LFPISYFEREAF--LGQSPQLYKQMLMATGLDRVFEIAPIFRAEEHNTRRHLNEATSIDI 234

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYG 287
           EM+F +  D ++ +E V+   F +                      F RI YD+AI    
Sbjct: 235 EMAFADDKDAMDILEKVVYNAFVDVYENRKKEIETLGIEFELPPEKFDRITYDEAIDIAN 294

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEF 311
               ++     +    E  +  E 
Sbjct: 295 AKGVEISWGEDLSREAEKAIGEEM 318



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 81/217 (37%), Gaps = 39/217 (17%)

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIR--VRLDMQDGDSCFFIAGDPLKFCSFAA 414
           A++    +    +  +G +   L     + I     +D+ +        G+       + 
Sbjct: 255 AFVDVYENRKKEIETLG-IEFELPPEKFDRITYDEAIDIANAKGVEISWGE-----DLSR 308

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           +A   I +E+G          +I D+P                PF             + 
Sbjct: 309 EAEKAIGEEMG-------GLYFITDWP------------SEIRPFYTMPHED------NP 343

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
              KA  +DL+    EI+SG  R H+ +++++     G++     + F     AF+ GMP
Sbjct: 344 EICKA--FDLMYKDLEISSGAQRIHLYDLLVENIKKKGLNP----DGFTYYLEAFKYGMP 397

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PH G   G DR  M+L   +N+RE  LFP  +     
Sbjct: 398 PHAGWGLGADRFTMVLTQQENIRECVLFPRDRQRLTP 434


>gi|28209978|ref|NP_780922.1| lysyl-tRNA synthetase [Clostridium tetani E88]
 gi|39932178|sp|Q899G7|SYK_CLOTE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|28202413|gb|AAO34859.1| lysyl-tRNA synthetase [Clostridium tetani E88]
          Length = 502

 Score =  226 bits (577), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 79/389 (20%), Positives = 152/389 (39%), Gaps = 32/389 (8%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++           V ++G +   R HG   F DI D YG  Q+    +    E 
Sbjct: 44  RTHTSEEIKSNFEELEDKEVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEER 103

Query: 62  AKSVRSEWV---LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            K  +S  +   + I G V             TG++ +     ++++ + + PLP     
Sbjct: 104 LKEYKSFDIGDFVTITGTV---------FKTRTGEVSIHITDFKLIAKSLK-PLPEKWHG 153

Query: 119 EYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                +R++ R++DL  +  +    +KRT+II  MR  + A+++IE  TP+L+  +    
Sbjct: 154 LKDPDLRYRQRYVDLIVNEDVRDTFMKRTKIIKYMREFLDAKDYIEVETPVLSPIAGGAA 213

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F           Y L  A + Y + L+  GF++ ++I   FR+E       P EF  
Sbjct: 214 ARPFTTHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP-EFTM 271

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +++  ++ + +D++   EN++  + E+      V      I +    +R           
Sbjct: 272 IELYEAYADYNDMMEITENMVAYIAEKVCGNTKVKYEETEIEFRPPWKR----------- 320

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           I M +  + +   +F             +      K    +    D +N +     +  L
Sbjct: 321 ITMVDSVKEYSGVDFNEIKTDEEARELVKGKDFELKKKLEDCTKADILNLFFEEYVEKNL 380

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTE 385
               +  D    ++ +    K+ N   TE
Sbjct: 381 IQPTFVCDYPVEISPLSK-KKNDNPEYTE 408


>gi|303244759|ref|ZP_07331089.1| aspartyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302484893|gb|EFL47827.1| aspartyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 438

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 100/326 (30%), Positives = 149/326 (45%), Gaps = 25/326 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           RTH   ++     G  + + GW H +R  G ++F+ +RD  G  Q+V        E+   
Sbjct: 9   RTHFSNEITPEMDGEEIIVMGWTHSIRKLGKLVFIILRDREGTVQIVVPKQKVSEEVFTT 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
           AKSV  E V+ I G V++      N     G  E+   +I IL+ AE   PL    +   
Sbjct: 69  AKSVGREDVIAIKGKVVA------NEKAPAG-FEIIPVEIRILNKAETPLPLDPSEKVPA 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RFLDLRR  +      R+ ++ S+R       FIE +TP L AS+ EG  + 
Sbjct: 122 DIDTRLDRRFLDLRRPKIQALFRLRSEMLKSVRDTFYNNGFIEVNTPKLVASATEGGTEL 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S  ++ +F  L Q+PQ YKQ++MA+GFDR F+I P FR E+  + R   E   +D E
Sbjct: 182 FPISYFDREAF--LGQSPQLYKQMMMAAGFDRVFEIGPIFRAEEHNTRRHLNEAISIDCE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYGT 288
           MSF ++ D +N +ENV+  VF +              N N     F R+ Y +A+    +
Sbjct: 240 MSFSDEKDAMNVLENVVHNVFVDLYENNQKELRTLDINLNVQETPFPRVTYTEAVDIVNS 299

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVF 314
              D+          E  +      F
Sbjct: 300 KGIDMEWGEDFSRAAEKILGDSMEGF 325



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 24/138 (17%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
           F +I ++P                PF             +    KA  +DL+    EI+S
Sbjct: 325 FYFITEWP------------TETRPFYTLPN------QENPKICKA--FDLMYKDLEISS 364

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  RNH  +++++    +G++       FG    AF+ GMPPH G   G +R +M++   
Sbjct: 365 GAQRNHKYDLLVEGIKRMGLNP----EGFGTYLEAFKYGMPPHAGWGMGAERFMMIITCQ 420

Query: 554 KNVREVSLFPMSQNFCDL 571
           +N+RE  LFP  +     
Sbjct: 421 ENIRECVLFPRDRQRLTP 438


>gi|322807845|emb|CBZ05420.1| lysyl-tRNA synthetase (class II) [Clostridium botulinum H04402 065]
          Length = 504

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 72/345 (20%), Positives = 137/345 (39%), Gaps = 25/345 (7%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++        G  V ++G +   R HG   F DI D YG  Q+    +    E 
Sbjct: 44  RTHTSKEVKDNYEDLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  ++  +    G ++S +         TG+  +     +++  +   PLP        
Sbjct: 104 LKEYKTFDI----GDIISVTGTVF--KTKTGETSIHITDFQLVCKSLR-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR-D 179
             +R++ R++DL  +  +    +KRT II SMR  +    F+E  TPIL+  +   A   
Sbjct: 157 PDLRYRQRYVDLIINQDVRDTFIKRTAIIKSMREFLDNRGFLEVETPILSPIAGGAAAKP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+  GF++ ++I   FR+E       P EF  +++
Sbjct: 217 FITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP-EFTAIEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D++   EN++  + E+      V      I +    RR           + M
Sbjct: 275 YEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGEEIDFTPPWRR-----------LTM 323

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            +  + +   +F +    +      +   I  K    +    D +
Sbjct: 324 VDAVKEYAGVDFNIIKNDIEARTIAKEKHIEFKKELKDCTKGDVL 368


>gi|226950975|ref|YP_002806066.1| lysine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226841230|gb|ACO83896.1| lysine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 504

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 72/345 (20%), Positives = 138/345 (40%), Gaps = 25/345 (7%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++     +  G  V ++G +   R HG   F DI D YG  Q+    +    E 
Sbjct: 44  RTHTSKEVKDNYENLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  ++  +    G ++S +         TG+  +     +++  +   PLP        
Sbjct: 104 LKEYKTFDI----GDIISVTGTVF--KTKTGETSIHITDFQLVCKSLR-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR-D 179
             +R++ R++DL  +  +    +KRT II SMR  +    F+E  TPIL+  +   A   
Sbjct: 157 PDLRYRQRYVDLIINQDVRDTFIKRTAIIKSMREFLDNRGFLEVETPILSPIAGGAAAKP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+  GF++ ++I   FR+E       P EF  +++
Sbjct: 217 FITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP-EFTAIEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D++   EN++  + E+      V      I +    RR           + M
Sbjct: 275 YEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEIDFTPPWRR-----------LTM 323

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            +  + +   +F +    +      +   I  K    +    D +
Sbjct: 324 VDAVKEYAGVDFNIIKNDIEARTIAKEKHIEFKKELKDCTKGDVL 368



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 79/223 (35%), Gaps = 28/223 (12%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AYI  ++  +  V   G             +   +    G     I  D ++  + A +
Sbjct: 292 IAYICEKVLGTTKVEYEGAEIDFTPPWRRLTMVDAVKEYAGVDFNIIKND-IEARTIAKE 350

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK--------KIDFAHNPFTMPQGGME 467
                 +EL             +    +E   E+K             ++P T  + G E
Sbjct: 351 KHIEFKKELKDCTKGD------VLIGLFEEFCEDKLMQPTFICDYPVENSPLTKKKRGNE 404

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----G 523
           +            +++    G E+ +     + S V  + F      +E+ ++       
Sbjct: 405 AF---------TERFEGFVFGREVCNAYSELNDSIVQKERFMQQLKERELGDDEAYMMDD 455

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
               + + GMPP GG+  GIDR++M L    ++R+V LFP  +
Sbjct: 456 DFITSLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFPTMK 498


>gi|170759400|ref|YP_001788859.1| lysyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|238688747|sp|B1KTC1|SYK_CLOBM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|169406389|gb|ACA54800.1| lysine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 504

 Score =  226 bits (577), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 72/345 (20%), Positives = 137/345 (39%), Gaps = 25/345 (7%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++        G  V ++G +   R HG   F DI D YG  Q+    +    E 
Sbjct: 44  RTHTSKEVKDNYEDLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  ++  +    G ++S +         TG+  +     +++  +   PLP        
Sbjct: 104 LKEYKTFDI----GDIISVTGTVF--KTKTGETSIHITDFQLVCKSLR-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR-D 179
             +R++ R++DL  +  +    +KRT II SMR  +    F+E  TPIL+  +   A   
Sbjct: 157 PDLRYRQRYVDLIINQDVRDTFIKRTAIIKSMREFLDNRGFLEVETPILSPIAGGAAAKP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+  GF++ ++I   FR+E       P EF  +++
Sbjct: 217 FITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP-EFTAIEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D++   EN++  + E+      V      I +    RR           + M
Sbjct: 275 YEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEIDFTPPWRR-----------LTM 323

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            +  + +   +F +    +      +   I  K    +    D +
Sbjct: 324 VDAVKEYAGVDFNIIKDDIEARAIAKEKHIEFKKELKDCTKGDVL 368



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 80/223 (35%), Gaps = 28/223 (12%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AYI  ++  +  V   G             +   +    G   F I  D ++  + A +
Sbjct: 292 IAYICEKVLGTTKVEYEGAEIDFTPPWRRLTMVDAVKEYAG-VDFNIIKDDIEARAIAKE 350

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK--------KIDFAHNPFTMPQGGME 467
                 +EL             +    +E   E+K             ++P T  + G E
Sbjct: 351 KHIEFKKELKDCTKGD------VLIGLFEEFCEDKLMQPTFICDYPVENSPLTKKKRGNE 404

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----G 523
           +            +++    G E+ +     + S V  + F      +E+ ++       
Sbjct: 405 AF---------TERFEGFVFGREVCNAYSELNDSIVQKERFMQQLKERELGDDEAYMMDD 455

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
               + + GMPP GG+  GIDR++M L    ++R+V LFP  +
Sbjct: 456 DFITSLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFPTMK 498


>gi|77359476|ref|YP_339051.1| lysyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|76874387|emb|CAI85608.1| lysyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 511

 Score =  226 bits (577), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 104/580 (17%), Positives = 200/580 (34%), Gaps = 119/580 (20%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H   DL             ++   V ++G +   R      F  I+D  G  Q  A+ 
Sbjct: 37  REHYTADLQAQFGDKSKEELVELQQVVSIAGRILAKRGP----FFVIQDMKGRVQSYASK 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     + K ++ ++     G ++        +    G + +   + ++L+ +   PLP 
Sbjct: 93  D-----VQKDLKEKYGQLDTGDIIGVKGALNKSG--KGDLYVEMTEYQLLTKSLR-PLPE 144

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  +++ R++DL  +   +   + R++++  +R  +   +F+E  TP+L    
Sbjct: 145 KFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVEGIRRFLADRDFMEVETPMLQVIP 204

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   +   P 
Sbjct: 205 GGASARPFVTHHNALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSTRHNP- 262

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  ++   ++ +  D++N  E++LR V E       V N       D+      + + D
Sbjct: 263 EFTMIEFYQAYADYIDLMNITEDMLRTVAENVLGSAVVVNT----TKDENGEVIDSVEYD 318

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P    ++++            IL  NP ++                +++  +A+   
Sbjct: 319 FGQPFTRLSMSDA-----------ILKYNPEFDAAVFNDPEN-----HFEQLKAYAKQ-- 360

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
                 +  ++ E+        + +         +             FI G P +    
Sbjct: 361 ------VHVKIPENCVWGPGKFLCEIFEETAEHMLIQPT---------FITGYPWEVSPL 405

Query: 413 AADARNHIAQELGIINCNCFEFCWIMD-FPFYEWNEE-EKKIDFAHNPFTMPQGGMESLK 470
              AR +        + N F    + D F F+    E        ++     +     ++
Sbjct: 406 ---ARRN--------DENSF----VTDRFEFFVGGRELANGFSELNDAQDQAERFTRQVE 450

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D    +A  YD                                           RA +
Sbjct: 451 EKDAGDDEAMHYD---------------------------------------EDYIRALE 471

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+PP  G   GIDR+VML   +  +++V LFP  +   D
Sbjct: 472 YGLPPTAGEGIGIDRLVMLFTDSPTIKDVILFPHMRPQAD 511


>gi|153940179|ref|YP_001392873.1| lysyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|168180988|ref|ZP_02615652.1| lysyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|170757532|ref|YP_001783159.1| lysyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|189082955|sp|A7GJB3|SYK_CLOBL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|229559856|sp|B1IGJ2|SYK_CLOBK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|152936075|gb|ABS41573.1| lysine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|169122744|gb|ACA46580.1| lysyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|182668060|gb|EDT80039.1| lysyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|295320850|gb|ADG01228.1| lysine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 504

 Score =  226 bits (577), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 72/345 (20%), Positives = 137/345 (39%), Gaps = 25/345 (7%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++        G  V ++G +   R HG   F DI D YG  Q+    +    E 
Sbjct: 44  RTHTSKEVKDNYEDLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  ++  +    G ++S +         TG+  +     +++  +   PLP        
Sbjct: 104 LKEYKTFDI----GDIISVTGTVF--KTKTGETSIHITDFQLVCKSLR-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR-D 179
             +R++ R++DL  +  +    +KRT II SMR  +    F+E  TPIL+  +   A   
Sbjct: 157 PDLRYRQRYVDLIINQDVRDTFIKRTAIIKSMREFLDNRGFLEVETPILSPIAGGAAAKP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+  GF++ ++I   FR+E       P EF  +++
Sbjct: 217 FITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP-EFTAIEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D++   EN++  + E+      V      I +    RR           + M
Sbjct: 275 YEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEIDFTPPWRR-----------LTM 323

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            +  + +   +F +    +      +   I  K    +    D +
Sbjct: 324 VDAVKEYAGVDFNIIKNDIEARTIAKEKHIEFKKELKDCTKGDVL 368



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 79/223 (35%), Gaps = 28/223 (12%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AYI  ++  +  V   G             +   +    G     I  D ++  + A +
Sbjct: 292 IAYICEKVLGTTKVEYEGAEIDFTPPWRRLTMVDAVKEYAGVDFNIIKND-IEARTIAKE 350

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK--------KIDFAHNPFTMPQGGME 467
                 +EL             +    +E   E+K             ++P T  + G E
Sbjct: 351 KHIEFKKELKDCTKGD------VLIGLFEEFCEDKLMQPTFICDYPVENSPLTKKKRGNE 404

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----G 523
           +            +++    G E+ +     + S V  + F      +E+ ++       
Sbjct: 405 AF---------TERFEGFVFGREVCNAYSELNDSIVQKERFMQQLKERELGDDEAYMMDD 455

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
               + + GMPP GG+  GIDR++M L    ++R+V LFP  +
Sbjct: 456 DFITSLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDVILFPTMK 498


>gi|182420117|ref|ZP_02951351.1| lysyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669572|ref|ZP_04529552.1| lysine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376154|gb|EDT73741.1| lysyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655016|gb|EEP52576.1| lysine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 501

 Score =  226 bits (576), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 74/352 (21%), Positives = 142/352 (40%), Gaps = 23/352 (6%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+ G++        G  V ++G +   R  G ++F DI D  G  Q+    D    E 
Sbjct: 44  RTHTTGEVRDNYEELEGKEVTIAGRIMSKRGQGKVVFSDIHDKDGKMQLFLKIDKVGEEN 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  ++  +    G  ++ + E        G+I ++    E+   + + PLP        
Sbjct: 104 LKEYKTYDI----GDWVAATGEVF--TTQRGEISINVNSFELTCKSLK-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
             +R++ R LD+  +  +    VKR+RII++MR  +    F+E  TPIL+  +   A   
Sbjct: 157 PDLRYRQRELDIITNSEVKDTFVKRSRIISAMREFLDNRGFLEVETPILSPIAGGAAAKP 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            V           L  AP+ Y + L+ +GF++ ++I   FR+ +  S R   EF  +++ 
Sbjct: 217 FVTHHNTLDMDMFLRIAPELYLKRLIVAGFEKVYEIGRNFRN-EGMSVRHNPEFTAIELY 275

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ + +D++   EN++  V E+ +    V+     I +    RR           I M 
Sbjct: 276 EAYSDYNDMMEITENMVAYVCEKINGTTKVTYQGTEIDFMPPWRR-----------ITMV 324

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
           +  + +   +F   +         +   +            + +N      G
Sbjct: 325 DAVKEYAGVDFTTINSDEEAQAIAKEKNLEFPKPLNTVTKGEVLNALYEEFG 376


>gi|332300671|ref|YP_004442592.1| Lysyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332177734|gb|AEE13424.1| Lysyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 579

 Score =  226 bits (576), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 103/560 (18%), Positives = 188/560 (33%), Gaps = 125/560 (22%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G V   R  G   F++++D  G  QV    D  C    K + ++    +  +  
Sbjct: 55  QEVSIAGRVMSRRIMGKASFMELQDTSGRIQVYVTRDDLCPGEDKDLYNKLFKKLLDIGD 114

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------YPESIRFKYRFLD 132
               +       TG+I + A+++ +LS A      V  + +          +R++ R++D
Sbjct: 115 IVGVKGFVFRTQTGEISVHAEELTLLSKALRPLPIVKAKDDQVFDGFTDPELRYRRRYVD 174

Query: 133 LRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   K   VKRT+I  SMR    A  ++E  TP+L +      AR F+         
Sbjct: 175 LIVNDEVKGIFVKRTKIFQSMRNFFNARGYLEVDTPVLQSIPGGAAARPFVTHHNALDIP 234

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  GF+  ++ +  FR+E                          +
Sbjct: 235 LY-LRIANELYLKRLIVGGFEGVYEFSRNFRNEG-------------------------M 268

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           +   N                  F  +    A + Y      +   +I H   E    + 
Sbjct: 269 DRTHN----------------PEFTCMEIYVAYKDYRWMM-QMTEQMIEHICQEVLGSTT 311

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
            +V    +   P Y    +            D + E+                   G V 
Sbjct: 312 IQVGEHTIEFKPPYRRLTM-----------IDAIQEY-------------------GGVN 341

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
             G     ++      +     ++  D+                +    +A+       +
Sbjct: 342 IDG-----MDEAELRKMCQSKGVEIDDTMG--------VGKLIDELFGAVAE------PH 382

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
             +  +I+D+P                   M     E    +DL      +++L  NG E
Sbjct: 383 LVQPTFIIDYP-----------------KAMSPLTKEHRDRSDL----TERFELFVNGKE 421

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRI 546
           +A+     +        F +     E  ++          RA + GMPP  G+  G+DR+
Sbjct: 422 LANAYSELNDPIDQRHRFEDQLRLSERGDDEAMYIDHDFLRALEFGMPPTSGMGIGMDRL 481

Query: 547 VMLLLGAKNVREVSLFPMSQ 566
           VMLL G ++++EV LFP  +
Sbjct: 482 VMLLTGQESIQEVLLFPQMR 501


>gi|168183599|ref|ZP_02618263.1| lysine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796980|ref|YP_002864532.1| lysyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182673242|gb|EDT85203.1| lysine--tRNA ligase [Clostridium botulinum Bf]
 gi|229262564|gb|ACQ53597.1| lysine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 504

 Score =  226 bits (576), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 71/345 (20%), Positives = 136/345 (39%), Gaps = 25/345 (7%)

Query: 5   RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++        G  V ++G +   R HG   F DI D YG  Q+    +    E 
Sbjct: 44  RTHTSKEVKENYEDLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  ++  +    G ++S +         TG+  +     +++  +   PLP        
Sbjct: 104 LKEYKTFDI----GDIISVTGTVF--KTKTGETSIHITDFQLVCKSLR-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR-D 179
             +R++ R++DL  +  +    +KRT II +MR  +    F+E  TPIL+  +   A   
Sbjct: 157 PDLRYRQRYVDLIINQDVRDTFIKRTAIIKAMREFLDNRGFLEVETPILSPIAGGAAAKP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+  GF++ ++I   FR+E       P EF  +++
Sbjct: 217 FITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP-EFTAIEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D++   EN++  + E+      V      I +    RR           + M
Sbjct: 275 YEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEIDFTPPWRR-----------LTM 323

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            +  + +   +F +           +   I  K    +    D +
Sbjct: 324 VDAVKEYAGVDFNIIKNDEEARTIAKEKHIEFKKELKDCTKGDVL 368


>gi|256811422|ref|YP_003128791.1| aspartyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256794622|gb|ACV25291.1| aspartyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 434

 Score =  226 bits (576), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 96/324 (29%), Positives = 147/324 (45%), Gaps = 19/324 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M   RTH   ++     G  V + GWVH +R  G IIF+ +RD  G+ Q+VA       E
Sbjct: 1   MKWKRTHYSANIKPEMDGEEVVIMGWVHSIRALGKIIFVILRDREGMVQIVAPKQKVGDE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGERE 119
           +   ++    L  + ++  R     N     G  E+   ++E+L+ A+  LPL    +  
Sbjct: 61  LFSQIKK---LGAEDVIAVRGKVVANEKAPNG-FEILPLELEVLNTAQRPLPLDPAEKVP 116

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R + RFLDLRR  +      R+ ++ S+R  +  E FIE +TP L AS  EG  +
Sbjct: 117 AELDTRLENRFLDLRRPKIQAIFKIRSEMLRSVRKTLYEEGFIEVNTPKLVASCTEGGTE 176

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S   + +F  L Q+PQ YKQ+LMA+G DR F+IAP FR E+  + R   E   +D+
Sbjct: 177 LFPISYFEREAF--LGQSPQLYKQMLMATGLDRVFEIAPIFRAEEHNTRRHLNEATSIDI 234

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYG 287
           EM+F +  D +  +E V+   F +                      F RI YD+AI    
Sbjct: 235 EMAFADDKDAMEMLEKVVYNAFLDVYENRKREIETLGIEFELPPEKFDRITYDEAIDIAN 294

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEF 311
               ++     +    E  +  E 
Sbjct: 295 AKGVEIEWGEDLSREAEKVIGEEM 318



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 31/157 (19%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           +A   I +E+G          +I D+P                PF             + 
Sbjct: 309 EAEKVIGEEMG-------GLYFITDWP------------SETRPFYTMPDE------KNP 343

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
              KA  +DL+    EI+SG  R H+ +++++     G++     + F     AF+ GMP
Sbjct: 344 NICKA--FDLMYKDLEISSGAQRIHLYDLLVENIKKKGLNP----DGFTYYLEAFKYGMP 397

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PH G   G DR  M+L   +N+RE  LFP  +     
Sbjct: 398 PHAGWGLGADRFTMVLTQQENIRECVLFPRDRQRLTP 434


>gi|121535048|ref|ZP_01666865.1| lysyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121306298|gb|EAX47223.1| lysyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 498

 Score =  226 bits (576), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 87/403 (21%), Positives = 152/403 (37%), Gaps = 53/403 (13%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +H   D+     +  G  VRL+G +  +R HG   F  + D  G  QV    D       
Sbjct: 44  SHHAADVLADFAALEGQTVRLAGRIMAIRGHGKATFAHLMDMSGRIQVYFRQDVLGEAAY 103

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              R   +  I G+      E +      G+I + A   EIL+ +   PLP         
Sbjct: 104 DFFRLLDIGDIIGV------EGVVFKTQRGEISVKATSFEILAKSLR-PLPEKWHGLKDV 156

Query: 123 SIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL     +    V R+RII +MR  + ++ F+E  TP++   +    AR F
Sbjct: 157 ETRYRQRYLDLIVNPEVRNTFVLRSRIIQAMRRYLDSKGFLEVETPMMHPIAGGAAARPF 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +        + Y +  AP+ Y + L+  GF+R ++I   FR+E       P EF  +++ 
Sbjct: 217 ITYHNALDMNLY-MRIAPELYLKRLIVGGFERVYEIGRVFRNEGISIRHNP-EFTLMELY 274

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDK 290
            ++ +  DI+   E ++  V  +      ++           + R+   +AI +Y G D 
Sbjct: 275 QAYADYQDIMKITEEIIAQVALDVLGTTKITYQGQEIDLTPPWTRMTMTEAILKYSGVDF 334

Query: 291 PDLRNPIIMHNVTEHFVHSEFR----------VFSKILSVN--------PGYEVWAIPAK 332
             ++       + +       +          VF ++   +              +  AK
Sbjct: 335 STVKTVEEARAIADRLGVVYEKKDGIGNILNNVFEEVAEKHLIQPTFIIGHPVEISPLAK 394

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPV 375
               N A  DR             A+IF R   +G      P+
Sbjct: 395 RNKDNPAITDRFE-----------AFIFAREMANGFSELNDPI 426



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 5/131 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E+  I          +    + +  D       +++      E+A+G    +   
Sbjct: 368 FEEVAEKHLIQPTFIIGHPVEISPLAKRNKD-NPAITDRFEAFIFAREMANGFSELNDPI 426

Query: 503 VMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F      +E  ++           A + GMPP GG+  GIDR+VMLL  + ++R+
Sbjct: 427 DQKERFLAQVAQRESGDDEAHMMDEDYVIALEYGMPPTGGLGIGIDRLVMLLTDSYSIRD 486

Query: 559 VSLFPMSQNFC 569
           V LFP  ++  
Sbjct: 487 VILFPHMRHRE 497


>gi|225569856|ref|ZP_03778881.1| hypothetical protein CLOHYLEM_05950 [Clostridium hylemonae DSM
           15053]
 gi|225161326|gb|EEG73945.1| hypothetical protein CLOHYLEM_05950 [Clostridium hylemonae DSM
           15053]
          Length = 646

 Score =  226 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 77/356 (21%), Positives = 146/356 (41%), Gaps = 38/356 (10%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           T    D+        G  V ++G V + R  G   F ++ D  G  Q     DS   E  
Sbjct: 43  TVHAADIKENYDEMEGKHVSVAGRVMQKRVMGKASFCNVLDQSGNIQSYVARDSLGEEAY 102

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  +   +  I GL      E       TG+I + A  +++LS + ++ LP         
Sbjct: 103 KEFKKLDIGDIVGL------EGEVFKTKTGEISIHATAVKLLSKSLQI-LPEKFHGLTNT 155

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             R++ R++DL  +   ++  +KR+ II+++R  +  + F+E  TP+L +++   A    
Sbjct: 156 DTRYRQRYVDLIMNPEVRDTFIKRSHIISAIRRYLDGQGFLEVETPMLVSNAGGAAARPF 215

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     + L  + + Y + L+  G ++ ++I   FR+E   +   P EF  +++  
Sbjct: 216 ETHFNALSEDFKLRISLELYLKRLIVGGLEKVYEIGRVFRNEGLDTRHNP-EFTLMELYQ 274

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKP 291
           ++ + + +++  EN+ R V +E     T+  N         F RI   DA+++Y G D  
Sbjct: 275 AYTDYNGMMDLTENLYRHVAQEVLGTTTIVYNGVEMDLGKPFERITMIDAVKKYAGVDWN 334

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
                  +H + E          ++ L+     E      KG   +  F +   E 
Sbjct: 335 ------EVHTLEE----------ARALADKHHVEYEDRHKKGDILSLFFEEFAEEH 374



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 11/133 (8%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   EE  I       +P  +    +   K  D   +   +++   NG+E+A+     
Sbjct: 366 FFEEFAEEHLIQPTFVMDHPIEISP--LTKKKPEDPEYV--ERFEFFMNGWEMANAYSEL 421

Query: 499 HMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      + F          +            A + GMPP GGI  GIDR+ ML+  + 
Sbjct: 422 NDPIDQRERFRAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLMTDSA 481

Query: 555 NVREVSLFPMSQN 567
            +R+V LFP  ++
Sbjct: 482 AIRDVLLFPTMKS 494


>gi|187777499|ref|ZP_02993972.1| hypothetical protein CLOSPO_01074 [Clostridium sporogenes ATCC
           15579]
 gi|187774427|gb|EDU38229.1| hypothetical protein CLOSPO_01074 [Clostridium sporogenes ATCC
           15579]
          Length = 504

 Score =  226 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 70/327 (21%), Positives = 135/327 (41%), Gaps = 24/327 (7%)

Query: 5   RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++        G  V ++G +   R HG   F DI D YG  Q+    +    E 
Sbjct: 44  RTHTSKEVKENYEDLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  ++  +    G ++S +         TG+  +     +++  +   PLP        
Sbjct: 104 LKEYKTFDI----GDIISVTGTVF--KTKTGETSIHITDFQLVCKSLR-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR-D 179
             +R++ R++DL  +  +    +KRT II +MR  +    F+E  TPIL+  +   A   
Sbjct: 157 PDLRYRQRYVDLIINQDVRDTFIKRTAIIKAMREFLDNRGFLEVETPILSPIAGGAAAKP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+  GF++ ++I   FR+E       P EF  +++
Sbjct: 217 FITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP-EFTAIEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY-GTD 289
             ++ + +D++   EN++  + E+      V            + R+   DA++ Y G D
Sbjct: 275 YEAYADYNDMMEITENMVAYICEKVLGTTKVQYEGTEIDFTPPWRRLTMVDAVKEYAGVD 334

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSK 316
              +++ I    + +       +    
Sbjct: 335 FNSIKDDIEARTIAKEKHVEFKKELKD 361


>gi|325261222|ref|ZP_08127960.1| lysine--tRNA ligase [Clostridium sp. D5]
 gi|324032676|gb|EGB93953.1| lysine--tRNA ligase [Clostridium sp. D5]
          Length = 649

 Score =  226 bits (575), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 72/351 (20%), Positives = 146/351 (41%), Gaps = 28/351 (7%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   ++        G  V ++G +   R  G   F +++D  G  Q     DS   ++ 
Sbjct: 50  THHSQEIKDQYEELEGKTVSIAGRMMSKRVMGKASFCNVQDLKGNIQSYVARDSIGEDVY 109

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  +   V  + G+V             TG++ + A  +++LS + ++ LP         
Sbjct: 110 KEFKKMDVGDVVGIVGEV------FRTKTGEMSIHASSVKLLSKSLQI-LPEKFHGLTNT 162

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            IR++ R++DL  +   K+  +KR++I++++R  + A+ F+E  TP+L +++   A    
Sbjct: 163 DIRYRQRYVDLIMNPEVKDTFIKRSKILSAIRRYLDADGFMEVETPMLVSNAGGAAARPF 222

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     + L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 223 ETHFNALDEDFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQ 281

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +   +++  EN+ R V +E     T+  N + +       R           I M +
Sbjct: 282 AYTDYHGMMDLTENLYRHVAQEVLGTTTIVYNGVEMDLGKPFER-----------ITMVD 330

Query: 302 VTEHFVHSEFRVFS-----KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
             + +   +F         K L+   G E      KG   +  F + + E 
Sbjct: 331 AVKKYAGIDFNEIQTTEEAKALAKEKGIEFEDRHKKGDILSLFFEEFVEEH 381



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 57/165 (34%), Gaps = 32/165 (19%)

Query: 417 RNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           R+     L +     +  +  +  ++MD P               +P T  +        
Sbjct: 363 RHKKGDILSLFFEEFVEEHLVQPTFVMDHP------------IEISPLTKKKPENPDY-- 408

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYR 527
                    +++   NG+E+A+     +      + F          +            
Sbjct: 409 -------VERFEFFMNGWEMANAYSELNDPIDQRERFKAQEELLAQGDEEANTTDEDFLN 461

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP--MSQNFCD 570
           A + GMPP GGI  GIDR+ MLL  +  +R+V LFP   +    D
Sbjct: 462 ALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFPTMKTLGGSD 506


>gi|313886734|ref|ZP_07820441.1| lysine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923775|gb|EFR34577.1| lysine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 579

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 102/560 (18%), Positives = 188/560 (33%), Gaps = 125/560 (22%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G V   R  G   F++++D  G  QV    D  C    K + ++    +  +  
Sbjct: 55  QEVSIAGRVMSRRIMGKASFMELQDTSGRIQVYVTRDDLCPGEDKDLYNKLFKKLLDIGD 114

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------YPESIRFKYRFLD 132
               +       TG+I + A+++ +LS A      V  + +          +R++ R++D
Sbjct: 115 IVGVKGFVFRTQTGEISVHAEELTLLSKALRPLPIVKAKDDQVFDGFTDPELRYRRRYVD 174

Query: 133 LRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   K   +KRT+I  SMR    A  ++E  TP+L +      AR F+         
Sbjct: 175 LIVNDEVKGIFIKRTKIFQSMRNFFNARGYLEVDTPVLQSIPGGAAARPFVTHHNALDIP 234

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  GF+  ++ +  FR+E                          +
Sbjct: 235 LY-LRIANELYLKRLIVGGFEGVYEFSRNFRNEG-------------------------M 268

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           +   N                  F  +    A + Y      +   +I H   E    + 
Sbjct: 269 DRTHN----------------PEFTCMEIYVAYKDYRWMM-QMTEQMIEHICQEVLGSTT 311

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
            +V    +   P Y    +            D + E+                   G V 
Sbjct: 312 IQVGEHTIEFKPPYRRLTM-----------IDAIQEY-------------------GGVN 341

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
             G     ++      +     ++  D+                +    +A+       +
Sbjct: 342 IDG-----MDEAELRKVCQSKGVEIDDTMG--------IGKLIDELFGAVAE------PH 382

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
             +  +I+D+P                   M     E    +DL      +++L  NG E
Sbjct: 383 LVQPTFIIDYP-----------------KAMSPLTKEHRDRSDL----TERFELFVNGKE 421

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRI 546
           +A+     +        F +     E  ++          RA + GMPP  G+  G+DR+
Sbjct: 422 LANAYSELNDPIDQRHRFEDQLRLSERGDDEAMYIDHDFLRALEFGMPPTSGMGIGMDRL 481

Query: 547 VMLLLGAKNVREVSLFPMSQ 566
           VMLL G ++++EV LFP  +
Sbjct: 482 VMLLTGQESIQEVLLFPQMR 501


>gi|332307385|ref|YP_004435236.1| lysyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174714|gb|AEE23968.1| lysyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 517

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 103/556 (18%), Positives = 193/556 (34%), Gaps = 106/556 (19%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + ++G  V ++G +   R      FL ++D  G  Q  A+ D+      K +++ +    
Sbjct: 56  LEELGKVVSIAGRILAKRGP----FLLLQDMTGRIQAYASKDTQ-----KDIKARYTSLD 106

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    E   +    G + ++  + ++L+ +   PLP        +  +++ R++DL
Sbjct: 107 IGDIIGVKGELHKSG--KGDLYVNMSEYQLLTKSLR-PLPEKFHGLADQETKYRQRYVDL 163

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   ++  + R++I+  +R  +    F+E  TP+L        A+ F           
Sbjct: 164 ITNQQTRDTFMIRSKIVTGIRNFLSERKFMEVETPMLQVIPGGATAKPFTTHHNALDIDM 223

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  L+   ++ +  D++N
Sbjct: 224 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMLEFYQAYADYQDLMN 281

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E +LR V ++    + V N                            NV E   +   
Sbjct: 282 LTEEMLRSVAQDVLGTSIVKNTIK---------------------DSEGNVVEEKTYDFG 320

Query: 312 RVFSKILSVNPGYEVWA-IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
           + F ++       + W     +      A  D +   A+         +  +  E   + 
Sbjct: 321 QPFQRLTMSEAVIKYWPEANVEAINDPEAHLDELKAMAKQ--------LHIKEPEVDGIW 372

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
           G G             I      +  D   FI   P +       AR +        + N
Sbjct: 373 GAGK--------YLCEIFEATAEEQLDQPTFITAYPWEVSPL---ARRN--------DDN 413

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
            F    + D                   F    GG E                 + NGF 
Sbjct: 414 SF----VTDR------------------FEFFVGGRE-----------------LANGFS 434

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
             +            +  +      +   +      RA + G+PP  G   GIDR+VML 
Sbjct: 435 ELNDSEDQEARF--RKQVAEKDAGDDEAMHFDDDYIRALEYGLPPTAGEGIGIDRLVMLF 492

Query: 551 LGAKNVREVSLFPMSQ 566
             +  +++V LFP  +
Sbjct: 493 TDSPTIKDVILFPHMK 508


>gi|332376007|gb|AEE63144.1| unknown [Dendroctonus ponderosae]
          Length = 590

 Score =  225 bits (574), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 98/551 (17%), Positives = 172/551 (31%), Gaps = 109/551 (19%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
            ++G VH +R  G  +IF D+R      Q++A      +E       +      G ++  
Sbjct: 122 SVAGRVHAIRASGPKLIFYDLRGEGTKLQIMATAKQ--YEKESEFEEDSDKIKRGDIIGV 179

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLH 139
               +      G++ +   K+ +LS      LP        +  RF+ R+LDL   + + 
Sbjct: 180 RG--VPTRTKKGELSVIPLKLTLLSPCL-HMLPHLYYGLKDKETRFRQRYLDLILNNNIR 236

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
                R +II  +R     + F+E  TP++   +        V    +      +  AP+
Sbjct: 237 FIFQTRAKIIAYIRKFFDEQGFLEIETPMMNMIAGGATAKPFVTHHNDLNMDLFMRIAPE 296

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y ++L+  GFDR ++I   FR+E       P EF   +  M++ +  D++   E++L  
Sbjct: 297 LYHKMLVVGGFDRVYEIGKQFRNEGIDLTHNP-EFTTCEFYMAYADYQDLIAITESLLST 355

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           +       + V               Y  D P+                       +I  
Sbjct: 356 MVYHIHGTHKVK--------------YHPDGPEGEE-------------------YEIDF 382

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
             P   +  +PA     N  F                                 P  +  
Sbjct: 383 TPPFKRIPMVPALEAALNVKF--------------------------------PPATEFY 410

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
           +   T+ +       + D        P                    I   C    +IM+
Sbjct: 411 SPTTTKFLDDLCIKHNVD-----CAPPRTTARLLDKLVGEF------IEEKCINPTFIME 459

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
                            +P  M             +     +++L     EI +     +
Sbjct: 460 -----------------HPQIMSPLAKWHRS----IPGLTERFELFVMKKEICNAYTELN 498

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
              V  Q F      K   ++           A + G+PP GG   GIDR+ M L    N
Sbjct: 499 DPAVQRQRFEQQAADKAAGDDEAQLVDENFCTALEYGLPPTGGWGLGIDRLTMFLTDNNN 558

Query: 556 VREVSLFPMSQ 566
           ++EV LFP  +
Sbjct: 559 IKEVLLFPAMK 569


>gi|188587577|ref|YP_001919618.1| lysyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|188497858|gb|ACD50994.1| lysyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 501

 Score =  225 bits (574), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 72/353 (20%), Positives = 141/353 (39%), Gaps = 25/353 (7%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++        G  V ++G +   R  G ++F DI D  G  Q+    D    E 
Sbjct: 44  RTHTSEEVKSNYEELEGKNVTVAGRIMSKRGQGKVVFSDIHDRDGKIQLFIKIDLVGEES 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            KS ++  +    G  +  + E       TG++ +     E++  + + PLP        
Sbjct: 104 LKSYKTYDL----GDWVVATGEVFTTK--TGEVSIKVSNFELICKSLK-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR-D 179
             +R++ R +D+  +   K   +KR++II+ +R  +    F+E  TPIL+  +   A   
Sbjct: 157 PDLRYRQREVDIITNPEVKETFIKRSKIISGIREFLDNRGFLEVETPILSPIAGGAAAKP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+ +GF++ ++I   FR+ +  S R   EF  +++
Sbjct: 217 FITHHNTLDMDMY-LRIATELYLKRLIVAGFEKVYEIGRNFRN-EGMSVRHNPEFTVIEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D++   EN++  V E+ +    V      I +    RR           I M
Sbjct: 275 YEAYSDYNDMMEITENMVAYVCEKVNGTTKVMYEGTEIDFTPPWRR-----------ITM 323

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
            +V + +   +F             +   +            + +N      G
Sbjct: 324 VDVVKEYAGVDFNEVKTNEEAQAIAKEKHLEFAKPLNTITKGEVLNSLYEEFG 376


>gi|228471340|ref|ZP_04056141.1| lysyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228306841|gb|EEK15954.1| lysyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 579

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 101/559 (18%), Positives = 188/559 (33%), Gaps = 125/559 (22%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G V   R  G   F++++D  G  QV    D  C    K + ++    +  +   
Sbjct: 56  EVSIAGRVMSRRIMGKASFMELQDASGRIQVYVTRDDLCPGEDKDLYNKLFKKLLDIGDI 115

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------YPESIRFKYRFLDL 133
              +       TG+I + A+++ +LS A      V  + +          +R++ R++DL
Sbjct: 116 VGVKGFVFRTQTGEISVHAEELTLLSKALRPLPIVKAKDDQVFDGFTDPELRYRRRYVDL 175

Query: 134 RRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   K   +KRT+I  SMR    +  ++E  TP+L +      AR F+          
Sbjct: 176 IVNEEVKGIFMKRTKIFQSMRNFFNSRGYLEVDTPVLQSIPGGAAARPFVTHHNALDIPL 235

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + Y + L+  GF+  ++ +  FR+E                          ++
Sbjct: 236 Y-LRIANELYLKRLIVGGFEGVYEFSRNFRNEG-------------------------MD 269

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
              N                  F  +    A + Y      +   +I H   E    +  
Sbjct: 270 RTHN----------------PEFTCMEIYVAYKDYRWMM-QMTEQMIEHICQEVLGSTTI 312

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
           +V    +   P Y    +            D + E+                   G V  
Sbjct: 313 QVGEHTIEFKPPYRRLTM-----------IDAIQEY-------------------GGVNI 342

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
            G     ++      +     ++  ++                +    +A+       N 
Sbjct: 343 DG-----MDEAELRKVCQAKGVEIDETMG--------VGKLIDELFGAVAE------PNL 383

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
            +  +I+D+P                   M     E    +DL      +++L  NG E+
Sbjct: 384 VQPTFIIDYP-----------------KAMSPLTKEHRDRSDL----TERFELFVNGKEL 422

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIV 547
           A+     +        F +     E  ++          RA + GMPP  G+  G+DR+V
Sbjct: 423 ANAYSELNDPIDQRHRFEDQLRLSERGDDEAMYIDHDFLRALEFGMPPTSGMGIGMDRLV 482

Query: 548 MLLLGAKNVREVSLFPMSQ 566
           MLL G ++++EV LFP  +
Sbjct: 483 MLLTGQESIQEVLLFPQMR 501


>gi|296109648|ref|YP_003616597.1| aspartyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295434462|gb|ADG13633.1| aspartyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 431

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 111/388 (28%), Positives = 173/388 (44%), Gaps = 26/388 (6%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACF 59
             RTH   ++     G  V ++GWVH +R  G IIF+ +RD  G  Q+ A     +   F
Sbjct: 2   MKRTHYSSEITPQMDGEEVIVAGWVHSIRALGKIIFVILRDREGTVQITAPKQKVEEGVF 61

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGER 118
           +  KS+  E V+ + G V++      N     G  E+   ++E+L+ AE  LPL    + 
Sbjct: 62  KTIKSLGVEDVIAVKGKVVA------NEKAPNG-FEIIPIEVEVLNRAERPLPLDPAEKV 114

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                 R + RFLDLR+  +      R  ++ S+R    +E FIE +TP L AS+ EG  
Sbjct: 115 PAELDTRLENRFLDLRKPRVQAIFKIRHEMLKSVRETFYSEGFIEVNTPKLVASATEGGT 174

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +    S   + +F  L Q+PQ YKQ+LMASG DR F+IAP FR E+  + R   E   +D
Sbjct: 175 ELFPISYFEKEAF--LGQSPQLYKQMLMASGLDRVFEIAPIFRAEEHNTRRHLNEATSID 232

Query: 239 MEMSFVEQDDILNTMENVLRGVF--------EEFS----NGNTVSNNFLRICYDDAIRRY 286
           +EM+F +  D +  +E V+            +E +           +F +I YD+AI   
Sbjct: 233 IEMAFADDKDAIKMLEKVVYNACVSVYENREKELNLLNHKLEVPPKSFDKITYDEAIEIA 292

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                ++     +    E  +  E   F  I+        +    K     +AF     +
Sbjct: 293 KRRGVEIEWGEDLSREAEKAIGEEMGGFYFIVDWPTEIRPFYTMPKDDKYCKAFDLMYKD 352

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGP 374
              S G   + +I+  L ES    G+ P
Sbjct: 353 LEISSGAQRI-HIYDMLVESIKNKGLNP 379



 Score =  107 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 33/157 (21%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           +A   I +E+G        F +I+D+P                PF       +       
Sbjct: 308 EAEKAIGEEMG-------GFYFIVDWP------------TEIRPFYTMPKDDKY------ 342

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
                  +DL+    EI+SG  R H+ ++++++  N G++     + F     AF+ GMP
Sbjct: 343 ----CKAFDLMYKDLEISSGAQRIHIYDMLVESIKNKGLNP----DAFTYYLEAFKYGMP 394

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PH G   G DR  M+L G +N+RE  LFP  ++    
Sbjct: 395 PHAGWGLGADRFTMVLTGQENIRECVLFPRDRHRLTP 431


>gi|154505279|ref|ZP_02042017.1| hypothetical protein RUMGNA_02793 [Ruminococcus gnavus ATCC 29149]
 gi|153794477|gb|EDN76897.1| hypothetical protein RUMGNA_02793 [Ruminococcus gnavus ATCC 29149]
          Length = 655

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 67/304 (22%), Positives = 131/304 (43%), Gaps = 22/304 (7%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   ++        G  V ++G +   R  G   F +++D  G  Q     DS   E  
Sbjct: 53  THHSLEIKENFEELAGKEVSIAGRMMSKRVMGKASFCNVQDLQGNIQSYVARDSIGEEAY 112

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  +   V    G V+  + E       TG+  + A  + +LS + ++ LP         
Sbjct: 113 KEFKKMDV----GDVIGITGEVF--ETKTGEKSIHASSVTLLSKSLQI-LPEKFHGLTNT 165

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            IR++ R++DL  +   K     R++I++++R  +  + F+E  TP+L +++   A    
Sbjct: 166 DIRYRQRYVDLIMNPDVKQTFINRSKILSAIRRYLDGQGFLEVETPMLVSNAGGAAARPF 225

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     + L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 226 ETHFNALDEDFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQ 284

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKP 291
           ++ + + +++  EN+ R V +E      +  N         F RI   DA+++Y G D  
Sbjct: 285 AYTDYNGMMDLTENLYRHVAQEVLGTTVIEYNGVQMDLGKPFERITMVDAVKKYAGVDWN 344

Query: 292 DLRN 295
           ++  
Sbjct: 345 EVET 348



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 9/132 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F M     +  L      + +   +++   NG+E+A+     +
Sbjct: 376 FFEEFAEEHLIQPT---FVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAYSELN 432

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F          ++           A + GMPP GGI  GIDR+ MLL  +  
Sbjct: 433 DPIDQRERFKAQEELLAQGDDEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTNSAA 492

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  ++
Sbjct: 493 IRDVLLFPTMKS 504


>gi|78044571|ref|YP_361162.1| lysyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|123756728|sp|Q3A9M2|SYK_CARHZ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|77996686|gb|ABB15585.1| lysyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 488

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 68/308 (22%), Positives = 130/308 (42%), Gaps = 24/308 (7%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++       V   V+++G +   R HG   F  I+D  G  Q+ A  +    + 
Sbjct: 34  RTHTAKEILDNFEQLVDKTVKIAGRIMAKRGHGKASFAHIQDMSGKIQIYARQNELGIDA 93

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K      +  I G+               G+I +     EIL+ +   PLP        
Sbjct: 94  YKLFEKLDIGDIIGV------TGHVFKTQKGEITVWLSSFEILAKSLR-PLPEKWHGLTD 146

Query: 122 ESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
             +R++ R++DL     + +  + R+RI+ ++R  +  + F+E  TP++   +    AR 
Sbjct: 147 VELRYRQRYVDLIVNPEVRETFILRSRIVKTIREFLDQKGFLEVETPMMHPIAGGAAARP 206

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  GF++ ++I   FR+E   +   P EF  L++
Sbjct: 207 FITHHNALDMKLY-LRIAPELYLKRLLVGGFEKVYEINRNFRNEGISTKHNP-EFTMLEL 264

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSN---------GNTVSNNFLRICYDDAIRRY-GTD 289
             ++ +  D+++  E ++  V E+               +   + RI    AI    G D
Sbjct: 265 YQAYADYHDMMDITEELITHVAEKVLGTLEITYQGTPINLHRPWKRIPMLKAIEEATGVD 324

Query: 290 KPDLRNPI 297
              +++P+
Sbjct: 325 FAGVKDPV 332



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 25/144 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +        +++D+P               +P    Q     L          ++++L  
Sbjct: 363 VEPTLINPTFVIDYP------------VEVSPLAKRQKENPDL---------TYRFELFI 401

Query: 487 NGFEIASGGIRNHMSEVMLQAF----SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
            G E+A+     +      + F           E           A + GMPP GG+  G
Sbjct: 402 YGREMANAFSELNDPIDQKERFLKQLEARAKGNEEAHMMDEDYITALEYGMPPAGGLGIG 461

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQ 566
           IDR+VMLL    ++R+V LFP+ +
Sbjct: 462 IDRLVMLLTDQASIRDVILFPLMR 485


>gi|166030715|ref|ZP_02233544.1| hypothetical protein DORFOR_00389 [Dorea formicigenerans ATCC
           27755]
 gi|166029507|gb|EDR48264.1| hypothetical protein DORFOR_00389 [Dorea formicigenerans ATCC
           27755]
          Length = 647

 Score =  225 bits (573), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 68/304 (22%), Positives = 130/304 (42%), Gaps = 19/304 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
               G  V ++G V + R  G   F +I D  G  Q     DS   E  K  +   +  I
Sbjct: 54  EEMEGKHVSVAGRVMQKRVMGKASFCNILDLSGNIQSYVARDSIGEESYKDFKKLDIGDI 113

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      E       TG+I + A  +++LS + ++ LP           R++ R++DL
Sbjct: 114 IGI------EGEVFKTKTGEISIHASAVKLLSKSLQI-LPEKFHGLTNTDTRYRQRYVDL 166

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   ++  +KR+RII+++R  +  + F+E  TP+L A++   A               
Sbjct: 167 IVNPEVRDTFIKRSRIISAVRRYLDGQGFMEVETPMLVANAGGAAARPFETHFNALNEDL 226

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + +++ 
Sbjct: 227 KLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMMDL 285

Query: 253 MENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY-GTDKPDLRNPIIMHNV 302
            EN+ R V +E      +            F RI   DA+++Y G D  ++        +
Sbjct: 286 TENLYRHVAQEVLGTTKIVYKGIEMDLGEPFERITMVDAVKKYAGVDWNEVETLEQAREL 345

Query: 303 TEHF 306
            +  
Sbjct: 346 AKEH 349



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 11/164 (6%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMES 468
                 AR  +A+E  +      +   I++  F E+ EE          F M     +  
Sbjct: 336 VETLEQAR-ELAKEHNLEFEERHKKGDILNLFFEEYVEE----HLLQPTFVMDHPVEISP 390

Query: 469 LKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG--- 524
           L      +     +++   NG+E+A+     +      + F+    +    +        
Sbjct: 391 LTKKKPENPNYVERFEFFMNGWEMANAYSELNDPIDQRERFAAQEEAFAAGDEEANHTDE 450

Query: 525 -LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
               A + GMPP GGI  GIDR+ MLL GA+ +R+V LFP  ++
Sbjct: 451 DFLNALEIGMPPTGGIGFGIDRMCMLLTGAEAIRDVLLFPTMKS 494


>gi|251780464|ref|ZP_04823384.1| lysine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243084779|gb|EES50669.1| lysine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 501

 Score =  224 bits (572), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 72/353 (20%), Positives = 142/353 (40%), Gaps = 25/353 (7%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++        G  V ++G +   R  G ++F DI D  G  Q+    D    E 
Sbjct: 44  RTHTSEEVKSNYEELEGKNVTVAGRIMSKRGQGKVVFSDIHDRDGKIQLFIKIDLVGEES 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            KS ++  +    G  +  + E       TG++ +     E++  + + PLP        
Sbjct: 104 LKSYKTYDL----GDWVVATGEVFTTK--TGEVSVKVSNFELICKSLK-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR-D 179
             +R++ R +D+  +   K   +KR++II+ +R  +  + F+E  TPIL+  +   A   
Sbjct: 157 PDLRYRQREVDIITNPEVKETFIKRSKIISGIREFLDNKGFLEVETPILSPIAGGAAAKP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+ +GF++ ++I   FR+ +  S R   EF  +++
Sbjct: 217 FITHHNTLDMDMY-LRIATELYLKRLIVAGFEKVYEIGRNFRN-EGMSVRHNPEFTVIEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D++   EN++  V E+ +    V      I +    RR           I M
Sbjct: 275 YEAYSDYNDMMEITENMVAYVCEKVNGTTKVMYEGTEIDFTPPWRR-----------ITM 323

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
            +V + +   +F             +   +            + +N      G
Sbjct: 324 VDVVKEYAGVDFNEVKTNEEAQAIAKEKHLEFAKPLNTITKGEVLNSLYEEFG 376


>gi|89892965|ref|YP_516452.1| hypothetical protein DSY0219 [Desulfitobacterium hafniense Y51]
 gi|219666232|ref|YP_002456667.1| lysyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|89332413|dbj|BAE82008.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219536492|gb|ACL18231.1| lysyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 488

 Score =  224 bits (572), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 77/354 (21%), Positives = 142/354 (40%), Gaps = 25/354 (7%)

Query: 3   RY-RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           RY RTH   ++     +  G  V+++G +   R  G ++F  I+D  G  Q     D   
Sbjct: 29  RYQRTHMAQEILDGFDTLEGQEVKIAGRMMSKRDQGKVVFTHIQDFSGQIQAYIRKDDVG 88

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            +  + +    +  I G+      +        G+I + A +++ILS +   PLP     
Sbjct: 89  EDWFELISKFDIGDIVGI------KGTVFRTRRGEISVHANEVQILSKS-MRPLPEKFHG 141

Query: 119 EYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                +R++ R++DL  +   +N  V R++II SMR  +  + F+E  TP L T      
Sbjct: 142 LTNVELRYRQRYVDLIMNPEVRNVFVMRSKIIRSMRNFLEGQGFLEVETPTLHTIPGGAA 201

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A +   + L+  GFD+ F+I   FR+E       P EF  
Sbjct: 202 ARPFITHHNTLDMDLY-LRIALELPLKRLIVGGFDKVFEIGRNFRNEGISIKHNP-EFTM 259

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +++  ++   +DI+   EN++  + +E      V+     I +    R         R P
Sbjct: 260 MELYQAYANFEDIMELTENMISAIAKEVHGTTEVTYQGQMIDFKTPWR---------RLP 310

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
           + +  + E+      ++ +   +     E       G    +   +   E+   
Sbjct: 311 M-LEGILEYGGVDFSQIHTDEEAQQAAKEKGLKVEPGSSRGKIINEFFEEFVEP 363



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 4/96 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++    G E+ +     +      Q F      ++  ++          +A + G+P
Sbjct: 392 TDRFEAFAYGRELGNAFSELNDPIDQRQRFEAQVAERDKGDDEAHMMDEDFVQALEYGLP 451

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           P GG+  GIDR+VMLL  + ++R+V LFP  +   D
Sbjct: 452 PTGGLGIGIDRLVMLLTDSASIRDVILFPTMRPRED 487


>gi|268317015|ref|YP_003290734.1| asparaginyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262334549|gb|ACY48346.1| asparaginyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 501

 Score =  224 bits (572), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 101/576 (17%), Positives = 175/576 (30%), Gaps = 107/576 (18%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKS 64
              +L    VG  V L GW++  R   G+ FL +RD  G+ Q V      D+  +++A+ 
Sbjct: 7   YIEELSR-YVGQTVTLKGWLYNKRSSKGLHFLILRDGTGLVQCVVAQDRVDADTWQVAEE 65

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
              E  L + G V+    +        G  E+  ++++++  +E  P+            
Sbjct: 66  ATQECSLEVVGTVVRDERQI-------GGHEVHVERLQLIGPSENYPITPKPHG---IEF 115

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              +R L LR       +  R R+I ++        F++   PILT ++ EG        
Sbjct: 116 LMDHRHLWLRSRRPWAIMRIRNRVIRAIHDFFQERGFLQLDAPILTGNAVEGTTTLFEID 175

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                ++  L Q+ Q Y    MA  F + +   P FR E  ++ R   EF+ ++ EM+F 
Sbjct: 176 YFGDKAY--LSQSGQLY-AEAMAMAFGKVYTFGPTFRAEKSKTRRHLTEFWMIEPEMAFY 232

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRYGTD 289
           + +  +   E ++  + +E                         F R+ Y +A+    +D
Sbjct: 233 DLEMNMALAEELVVHIVQEVLRHCRTELEVLGRDIAALERVQPPFPRLTYSEAVELLRSD 292

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
           +        +  + E     E                    AK     R     +     
Sbjct: 293 ETARMIDARIEALKEEQRQLETE--------RAENRRRYGQAKKAEKRRIDAREIE---- 340

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
                    I  RLDE        P+ K                 D     +    P+  
Sbjct: 341 ---------INQRLDEIEKELENLPLWK--ESARNFQWGNDFGNSDETVLTWHFDRPIIV 389

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
                                         FP             A   F M +   +  
Sbjct: 390 HR----------------------------FP------------AAIKAFYMKRDPEDDR 409

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV-MLQAFSNVGISKEVVENRFGGLYRA 528
                    A   D++         G      ++  L+A                     
Sbjct: 410 L--------ALGMDVLAPEGYGEIIGGGQRADDLAFLEAQIEAHGLPREAFEW---YLDL 458

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            + G  PH G   G++R +  + G  +VREV  FP 
Sbjct: 459 RRYGTVPHSGFGLGLERTLAWICGVHHVREVIPFPR 494


>gi|118444238|ref|YP_877136.1| lysyl-tRNA synthetase [Clostridium novyi NT]
 gi|259511525|sp|A0PXN4|SYK_CLONN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|118134694|gb|ABK61738.1| lysyl-tRNA synthetase [Clostridium novyi NT]
          Length = 510

 Score =  224 bits (571), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 76/318 (23%), Positives = 138/318 (43%), Gaps = 30/318 (9%)

Query: 5   RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+   +        G  V ++G +   R HG   F DIRD YG  Q+    +    E 
Sbjct: 53  RTHTSQQVKDNYDELEGKNVTVAGRLMSKRVHGKAGFSDIRDRYGKIQLYIKINDVGEEK 112

Query: 62  AKSVRSEWV---LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            K  ++  +   + I G V             TG+I L     ++LS + + PLP     
Sbjct: 113 LKEYKTFDIGDFVSITGTV---------FKTKTGEITLHILDFQLLSKSLK-PLPEKFHG 162

Query: 119 EYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                +R++ R++DL  +  + +  +KRT II ++R  +   +F+E  TPIL+  +    
Sbjct: 163 LKDPDLRYRQRYVDLIMNEDVKETFMKRTAIIKAIREFLDNRDFLEVETPILSPIAGGAA 222

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + Y + L+  GF++ ++I   FR+E       P EF  
Sbjct: 223 ARPFITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDVRHNP-EFTA 280

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY- 286
           +++  ++ + +D++   EN++  V E+ +                 + RI   DA++ Y 
Sbjct: 281 IELYEAYADYNDMMEITENMVAYVCEKVNGTTKVMYEGTEIDFKPPWRRITMVDAVKEYA 340

Query: 287 GTDKPDLRNPIIMHNVTE 304
           G D  +++       + +
Sbjct: 341 GVDFNEVKTDEEAREIAK 358


>gi|330835726|ref|YP_004410454.1| aspartyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329567865|gb|AEB95970.1| aspartyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 429

 Score =  224 bits (571), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 87/268 (32%), Positives = 135/268 (50%), Gaps = 11/268 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   ++     G  V L+GWVH VR  GG  F+ +RD  GI QVV    S  FE+AK 
Sbjct: 3   RTHFVKEITPDLDGKPVTLAGWVHNVRDLGGKKFILLRDKSGIGQVVVEKSSPPFELAKE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES 123
           +  E V+ + G+V S              +E+S   ++ILS A+  LPL V  + +    
Sbjct: 63  LSQESVIQVQGIVKSDRR-------APNGVEVSCTDLKILSKAKSPLPLDVSDKVKADIE 115

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K R LDLRR  +   I  ++  + + R  +    F E  TP + A+  EG       
Sbjct: 116 VRLKERLLDLRRQEMQAMIRIQSTAVKTFREVLYKNGFYEIFTPKIIATGTEGGAQLFPV 175

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + +F A  Q+PQ YK+ L+AS  +R F+IAP +R E+  +     EF  +D+EM+F
Sbjct: 176 IYFGKEAFLA--QSPQLYKE-LLASAVERVFEIAPAWRAEESDTPYHLAEFVSMDVEMAF 232

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS 271
            + +D++N +E ++  V +  +  N   
Sbjct: 233 ADYNDVMNVVEEIMVNVLQNVAKHNQED 260



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 78/213 (36%), Gaps = 32/213 (15%)

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            + E   V  +  VAKH N  +   +  RL             + L+             
Sbjct: 240 NVVEEIMVNVLQNVAKH-NQEDLAILGHRLPSISRPIKRVTYREALEILQSQG-LNVKFG 297

Query: 422 QELGIINCNCFE------FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            ++G                +I+D+P             A   +T  + G  ++      
Sbjct: 298 DDIGTPESRILNKVLEQDIYFIIDWP-----------ASARPFYTRRKEGDNNI------ 340

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
              +  +DL+    E+ SG  RN+  EV+       G++       F    + F  G+PP
Sbjct: 341 ---SESFDLIYRWLELVSGSSRNNTREVLESELRARGLNPVS----FEFFLKWFDYGIPP 393

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           H G   G+ R +++L G ++V+EVSLFP  +  
Sbjct: 394 HAGFGMGLQRFMLMLTGLQSVKEVSLFPRDKKR 426


>gi|227547917|ref|ZP_03977966.1| lysyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227080002|gb|EEI17965.1| lysyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 520

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 106/559 (18%), Positives = 188/559 (33%), Gaps = 118/559 (21%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            +    V ++G +   R  G + F  +++  G          +  E+     + W   +D
Sbjct: 69  EETDDVVSVAGRIMFKRDTGKLCFASLQEGDGTQ---LQVMLSLAEVGADALASWKDDVD 125

Query: 75  -GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++S +   I +    G++ + A   ++ S A       F   E  E  R ++R+ DL
Sbjct: 126 LGDIVSVTGRVIASK--RGELSVMASSWQMASKALRPLPVAFA--EMNEEQRVRHRYTDL 181

Query: 134 RRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              +  + N + R ++I ++R  +   +F+E  TP+L        AR F+  S       
Sbjct: 182 IMRSAARDNAMTRIKVIAAVRKYLTGLDFVEVETPMLQTLHGGAAARPFVTRSNALDIDL 241

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y +  +  G +R F+I   FR+E   S   P EF  L+   ++    D   
Sbjct: 242 Y-LRIAPELYLKRCVVGGIERVFEINRNFRNEGVDSSHSP-EFTMLETYQAWGTYADGAK 299

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            M+ +++   EE                                 + + + TE+    E+
Sbjct: 300 MMKGLVQFCAEEVFGSQ---------------------------KVTLADGTEYDFSGEW 332

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
           +V     S+N                R F           GQP              V  
Sbjct: 333 KVLQMYPSLNE------------ALARKF----------PGQP-------------EVTI 357

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
              V          A+   + ++           P             I +EL   +   
Sbjct: 358 DSSV------EELTAVAGAIGLKV----------PANAGWLHGKLVEEIWEELC--SDQL 399

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
           +E  ++ +FP               +P T                    ++DL   GFE+
Sbjct: 400 YEPTFVTNFP------------VETSPLTRDHRD---------QPGVTEKWDLYIRGFEL 438

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIV 547
           A+G        +  + F +        ++           A + GMPP  G   G+DR++
Sbjct: 439 ATGYSELVDPVIQRERFVDQARLAAHGDDEAMVLDEDFLAAMEQGMPPTAGTGMGVDRLL 498

Query: 548 MLLLGAKNVREVSLFPMSQ 566
           M L G   +RE  LFPM +
Sbjct: 499 MALTGLG-IRETVLFPMVK 516


>gi|302876581|ref|YP_003845214.1| lysyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307687256|ref|ZP_07629702.1| lysyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302579438|gb|ADL53450.1| lysyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 508

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 77/353 (21%), Positives = 144/353 (40%), Gaps = 25/353 (7%)

Query: 5   RTHSCGDLGVSDVG---SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++  +        V ++G +   R HG   F DI D YG  Q+    D+   E 
Sbjct: 51  RTHTSNEVKENFEDLEEKEVVVAGRLMSKRVHGKAGFCDIHDRYGKLQLHVKIDNIGEEK 110

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  ++  +    G  +S + +       TG+I +S    + L+ +   PLP        
Sbjct: 111 LKKFKTLDI----GDFISVTGKVF--KTKTGEITVSVTDYQPLTKSLR-PLPEKYHGLKD 163

Query: 122 ESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
             +R++ R++DL  +   K   +KR+ II +MR  +    +IE  TPIL+  +    AR 
Sbjct: 164 TDLRYRQRYVDLIMNPEVKETFMKRSAIITAMREYLDQHAYIEVETPILSPIAGGAAARP 223

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+  GF++ ++I   FR+E   S R   EF  +++
Sbjct: 224 FVTHHNSLDIDMY-LRIATELYLKRLIVGGFEKVYEIGRNFRNEGI-SVRHNPEFTMIEL 281

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D++   EN++  + ++      V+     I +    RR           I M
Sbjct: 282 YEAYADYNDMMVLTENMVAYICKKVLGTTKVTYQGTEIDFTPPWRR-----------ITM 330

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
            +  + +   +F             +   +  K         + +NE   + G
Sbjct: 331 VDAVKEYAGVDFNEIKTDEEARQIAKEKHLELKKELKYYTKGEILNELYEAFG 383



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 71/218 (32%), Gaps = 16/218 (7%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AYI  ++  +  V   G             +   +    G     I  D  +    A +
Sbjct: 299 VAYICKKVLGTTKVTYQGTEIDFTPPWRRITMVDAVKEYAGVDFNEIKTD-EEARQIAKE 357

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
               + +EL                   E  E   +       F        S       
Sbjct: 358 KHLELKKELKYYTKGEI---------LNELYEAFGEEHMIQPTFIYDYPVEISPLTKKKR 408

Query: 476 SIKAF--QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
             +AF  +++    G E+ +     +   V  + F      +E  ++           A 
Sbjct: 409 GNEAFTERFEGFVFGRELCNAYSELNDPIVQKERFLQQLKEREHGDDEAYMMDDDFITAL 468

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + GMPP GG+  GIDR+VM L  + ++R+V LFP  + 
Sbjct: 469 EIGMPPTGGMGMGIDRLVMFLTDSASIRDVLLFPTMKQ 506


>gi|327400136|ref|YP_004340975.1| aspartyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327315644|gb|AEA46260.1| aspartyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 430

 Score =  224 bits (570), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 97/388 (25%), Positives = 168/388 (43%), Gaps = 31/388 (7%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAK 63
               ++G  DVG  V L GW+H VR HGG++F+ +RD  G  Q+       D   F  AK
Sbjct: 3   KYTSEIGEEDVGKEVTLYGWIHEVRDHGGLVFVILRDREGFIQITLPKKKVDREIFNRAK 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPE 122
            VR E V+ + G+V +            G  E+     ++L+ A+  LPL V  +     
Sbjct: 63  KVRRESVVMVKGIVKAEPK-------APGGYEVIPTAFDVLNEADAPLPLDVAEKVPAEL 115

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R  +R+LDLR+  +      R  ++ S+R  +  E FIE +TP + +++ EG  +   
Sbjct: 116 DTRLDHRYLDLRKPKIQAIFRIRHCMLQSVRRFLCEEGFIEVNTPKIVSTATEGGTELFP 175

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            S   + +F  L Q+PQ YKQ+LM +G ++ F+I P FR E+  + R   E   +D+E S
Sbjct: 176 ISYFEKEAF--LNQSPQLYKQVLMGAGLEKVFEIGPIFRAEEHNTVRHLNEAISIDIEAS 233

Query: 243 FVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYGTDK 290
           F++ + +++ +E ++  ++E+ S              +     F R+ YD+AI       
Sbjct: 234 FMDHEGVMDVLERLVARIYEDVSVECEKFLSWLDIKLDVPEVPFERLKYDEAIEIAHEGG 293

Query: 291 PDLRNP-----IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
            D+          +  + EH   S + +        P Y +          +        
Sbjct: 294 EDIPWGEDLSTAALKIIAEHM-DSHYFIVDWPTESKPFYAMPYDDKPEVCKSFDLMHGWL 352

Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMG 373
           E A    +  L  +  +  E   ++   
Sbjct: 353 ELASGAQRIHLYDLLVKRIEECGMSPES 380



 Score =  114 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 24/145 (16%)

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L II  +     +I+D+P      E K       PF       +          K+  +D
Sbjct: 307 LKIIAEHMDSHYFIVDWP-----TESK-------PFYAMPYDDK------PEVCKS--FD 346

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+    E+ASG  R H+ +++++     G+S       FG    AF+ GMPPH G   G 
Sbjct: 347 LMHGWLELASGAQRIHLYDLLVKRIEECGMSP----ESFGFYLEAFRYGMPPHAGWGLGA 402

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNF 568
           +R++M +LG KN+RE  +FP  ++ 
Sbjct: 403 ERLLMSMLGLKNIREAIMFPRDRHR 427


>gi|229825232|ref|ZP_04451301.1| hypothetical protein GCWU000182_00584 [Abiotrophia defectiva ATCC
           49176]
 gi|229790604|gb|EEP26718.1| hypothetical protein GCWU000182_00584 [Abiotrophia defectiva ATCC
           49176]
          Length = 636

 Score =  224 bits (570), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 64/335 (19%), Positives = 127/335 (37%), Gaps = 23/335 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              V ++G +   R  G   F ++ D YG  Q     DS   E     +   V  + G+ 
Sbjct: 55  NKQVTIAGRMMFKRIMGKASFCNLSDRYGSMQCYVARDSIGEEAYADFKKYDVGDVIGV- 113

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                +       TG+I + A+++ +LS +   PLP           R++ R+LDL  + 
Sbjct: 114 -----KGFVFKTKTGEISVHAEEVTLLSKSLR-PLPEKYHGLKDTEARYRQRYLDLIMNQ 167

Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +     KR++I+  +R  +  ++F+E  TP+L  ++   A                L  
Sbjct: 168 DVRNTFEKRSQILKEIRSFLAEKDFMEVETPLLVENAGGAAARPFFTHYNALDEERKLRI 227

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + + Y + L+  GF+R F+I   FR+E   +   P EF  +++  ++ + + +++  E +
Sbjct: 228 SLELYLKRLIVGGFERVFEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYNGMMDLTEEM 286

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
            R + E+                  A+  Y   + D   P     + +         FS+
Sbjct: 287 FRYLAEKVCG--------------SAVISYNGIELDFSKPFKRITMLDAVKDYSGVDFSE 332

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           I +      +          +    D +N +    
Sbjct: 333 ITTDEAAKAIAKEKNIAFEPHHKRGDIINLFFEEF 367



 Score = 94.0 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSI-KAFQYDLVCNGFEIASGGIRNH 499
           F+E   EEK +      F M     +  L      +  +  +++L  N +E+ +     +
Sbjct: 363 FFEEFCEEKMVQPT---FVMDHPVEISPLTKKKPGAEDRVERFELFINTWEMCNAYSELN 419

Query: 500 MSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F+         +            A + GMPP GGI  GIDR+VMLL  + +
Sbjct: 420 DPIDQRERFAAQDALAAAGDEEANHTDEDFLTALEYGMPPTGGIGYGIDRLVMLLTDSAS 479

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 480 IRDVLLFP 487


>gi|225375162|ref|ZP_03752383.1| hypothetical protein ROSEINA2194_00786 [Roseburia inulinivorans DSM
           16841]
 gi|225213036|gb|EEG95390.1| hypothetical protein ROSEINA2194_00786 [Roseburia inulinivorans DSM
           16841]
          Length = 664

 Score =  224 bits (570), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 70/351 (19%), Positives = 137/351 (39%), Gaps = 28/351 (7%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   D+     S  G  V ++G +   R  G   F +++D  G  Q     D    E  
Sbjct: 58  THHSTDIKDNFESLEGQEVTVAGRMMFKRVMGKASFCNVQDLKGRIQAYVARDEIGEESY 117

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              +   V  I G+      +       TG+I + AQ++ +LS + ++ LP         
Sbjct: 118 ADFKKYDVGDILGI------KGKVFKTQTGEISIHAQEVTLLSKSLQI-LPEKYHGLTDT 170

Query: 123 SIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDF 180
             R++ R++DL  +  +    VKR+++I+S+R  +  + F+E  TP+L +++    AR F
Sbjct: 171 DARYRQRYVDLIMNEDVKDTFVKRSKVISSIRRYLDGQGFMEVETPMLVSNAGGASARPF 230

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                        L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++ 
Sbjct: 231 ETHFNALNEDL-KLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELY 288

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ +   +++  EN+ R + +E +                 I  YG    DL  P    
Sbjct: 289 QAYTDYHGMMDLTENLYRYIAKEVTGSE--------------ILTYGEHTMDLSKPFERI 334

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
            + +         F+++       ++               D +N +    
Sbjct: 335 TMVDAVKKYANIDFNEVPDTAAAKKLAEEHHIEYEERHEKGDILNLFFEEY 385



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 30/160 (18%)

Query: 417 RNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           R+     L +     +  +  +  ++MD P               +P T  +    +   
Sbjct: 371 RHEKGDILNLFFEEYVEEHLIQPTFVMDHP------------IEISPLTKMKPEDPNY-- 416

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYR 527
                    +++   NG+E+A+     +  E   + F     +    +            
Sbjct: 417 -------VERFEFFMNGWEMANAYSELNDPEDQRRRFEAQEKAFAAGDEEANHTDEDFLN 469

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A   GMPP GGI  GIDR+VM++  +  +R+V LFP  ++
Sbjct: 470 ALAIGMPPTGGIGFGIDRMVMMMTNSPAIRDVLLFPTMKS 509


>gi|323703647|ref|ZP_08115289.1| lysyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323531362|gb|EGB21259.1| lysyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 509

 Score =  223 bits (569), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 70/346 (20%), Positives = 136/346 (39%), Gaps = 28/346 (8%)

Query: 5   RTHSCGDL---GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH   D+     +  G  V ++G +   R  G   F +++D  G  Q+ A  D    E 
Sbjct: 55  RTHLTADIINNFAAMEGQTVVIAGRIMAKRVMGKASFANLQDSAGNIQIYARLDDLGAEE 114

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                   +  I G                G+I +  +K  +L+ +   PLP        
Sbjct: 115 YSRFEKLDIGDIIGC------SGKVFKTRKGEITVHIEKYTMLAKSLR-PLPEKWHGLKD 167

Query: 122 ESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
             +R++ R++DL     + +  V R+RI+ ++R  +    F+E  TP++   +    AR 
Sbjct: 168 VDLRYRQRYVDLIVNPEVKQTFVIRSRIVRAIRNYLDQRGFLEVETPMMHPIAGGASARP 227

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+        + Y +  AP+ Y + L+  GFD+ ++I   FR+E   +   P EF  L++
Sbjct: 228 FITHHNALDMNLY-MRIAPELYLKRLLVGGFDKVYEINRNFRNEGISTKHNP-EFTSLEL 285

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  D+++  E+++  V  E     T+    + I      RR           + M
Sbjct: 286 YQAYGDYHDMMDLTEDLISHVAREVLGTTTLEYEGVEISLAKPWRR-----------VPM 334

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
             + +     +F       +     +   +  + G     + D +N
Sbjct: 335 LEIVKEHSGLDFTQLKDDQAAYDAAKGLGLEIEPGA---KWGDILN 377



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 68/192 (35%), Gaps = 33/192 (17%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
           L+    +  +   D   G       G          D  N + +E+  +     +  +++
Sbjct: 344 LDFTQLKDDQAAYDAAKGLGLEIEPGAKW------GDILNTVFEEM--VEEKLIQPTFVI 395

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D+P               +P          L          ++++L   G E+A+     
Sbjct: 396 DYP------------VEISPLAKRHKEHPEL---------TYRFELFIYGREMANAFSEL 434

Query: 499 HMSEVM----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +         L          +  +       +A + GMPP GG+  GIDR+VMLL  + 
Sbjct: 435 NDPIDQKGRFLAQVEKREAGDDEAQMYDEDFVQALEYGMPPAGGLGIGIDRLVMLLTNSS 494

Query: 555 NVREVSLFPMSQ 566
           ++R+V LFP+ +
Sbjct: 495 SIRDVILFPLMR 506


>gi|262368776|ref|ZP_06062105.1| lysyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262316454|gb|EEY97492.1| lysyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 508

 Score =  223 bits (569), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 98/580 (16%), Positives = 184/580 (31%), Gaps = 136/580 (23%)

Query: 4   YRTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL                   V ++G V   R      F+ I+D  G  Q+  
Sbjct: 47  KREHYAQDLQDQFADKSKEEIEAAEHVYVSVAGRVMLNRGS----FIVIQDMTGRIQLYV 102

Query: 53  NPDSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
                     E  KS+    ++ + G +  RS +        G + +  +  E+L+ +  
Sbjct: 103 ARKELAPETLETIKSLDLGDIIAVKGYI-GRSGK--------GDLYVHIEHFELLTKSLR 153

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPI 168
            PLP          ++++ R+LDL  +   +     R ++++ +R  +  + F+E  TP+
Sbjct: 154 -PLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVSGIRAFLTEQRFMEVETPM 212

Query: 169 LTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           +        AR F           + L  AP+ Y + L+  GF+R F+I   FR+E   +
Sbjct: 213 MHVIPGGASARPFETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVST 271

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
              P EF  ++   ++ +  D++   EN+L  +  +      V               YG
Sbjct: 272 RHNP-EFTMIEFYQAYADYKDLMELTENMLERLALDILGSTDVP--------------YG 316

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
            +    + P    ++           F  IL+ NP +            +R F       
Sbjct: 317 EEVYSFKGPFKKISM-----------FDAILAHNPQF------TPENVNDREF------- 352

Query: 348 ARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407
                                      +AK +     E ++    +    +  F      
Sbjct: 353 ---------------------------LAKFVQEELKEQVKPGFGLGKLQTIVFEETVET 385

Query: 408 KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
           +                           +I ++P               +P         
Sbjct: 386 QLRQ----------------------PTFITEYP------------AETSPLARRNDHNP 411

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
            +   D         +L     E+     +    +  +   S      +   +       
Sbjct: 412 HI--TDRFEFFIGGRELANGFSELNDPIDQAERFQAQV---SEKDAGDDEAMHYDADFVE 466

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP  G   GIDR+VML   A ++R+V LFP  ++
Sbjct: 467 ALEYGLPPTAGEGIGIDRLVMLFANAASIRDVILFPHMRH 506


>gi|260588923|ref|ZP_05854836.1| lysine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540702|gb|EEX21271.1| lysine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 646

 Score =  223 bits (569), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 74/322 (22%), Positives = 137/322 (42%), Gaps = 23/322 (7%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   ++        G  V L+G +   R  G   F  I+D  G  Q     D+   +  
Sbjct: 43  THHSMEVKDAFEELEGKSVSLAGRMMSKRVMGKASFCSIQDVQGSIQSYVARDNIGEDHY 102

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  +   +  I G+      +       TG+I + A ++ +LS + + PLP         
Sbjct: 103 KDFKKMDIGDIVGI------KGEVFKTKTGEISIHATEVTLLSKSLK-PLPEKFHGLTNT 155

Query: 123 SIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +  +    +KR++II S+R  +  + F+E  TP+L A++   A    
Sbjct: 156 DLRYRQRYVDLIMNADVKDTFIKRSKIIASIRNYLNGQGFLEVETPMLVANAGGAAARPF 215

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     + L  + + Y + L+  G ++ ++I   FR+E   +   P EF  +++  
Sbjct: 216 ETHFNALDEDFKLRISLELYLKRLIVGGMEKVYEIGRVFRNEGLDTRHNP-EFTLMELYQ 274

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKP 291
           ++ +   +++  EN+ R V +E      +  N         F RI   DA+++Y G D  
Sbjct: 275 AYTDYHGMMDLTENLYRHVAQEVLGTTKIVYNGIEMDLGKPFERITMVDAVKKYAGVDFN 334

Query: 292 DLRNPIIMHNVT-EHFVHSEFR 312
           ++        V  EH V  E R
Sbjct: 335 EIHTLKEAREVAKEHHVEYEER 356



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F M     +  L      + +   +++   NG+E+A+     +
Sbjct: 366 FFEEFAEEHLIQPT---FVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAYSELN 422

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F          +            A + GM P GGI  GIDR+VMLL  +  
Sbjct: 423 DPIDQRERFKAQEELLAQGDEEANTTDEDFMNALEIGMAPTGGIGFGIDRMVMLLTDSAA 482

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  ++
Sbjct: 483 IRDVLLFPTMKS 494


>gi|331091968|ref|ZP_08340800.1| hypothetical protein HMPREF9477_01443 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330402867|gb|EGG82434.1| hypothetical protein HMPREF9477_01443 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 641

 Score =  223 bits (569), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 65/316 (20%), Positives = 139/316 (43%), Gaps = 22/316 (6%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   ++        G  V ++G +   R  G   F +++D  G  Q     D+   E  
Sbjct: 42  THHSMEIKDNFEEMEGKDVSIAGRIMSKRVMGKASFCNVQDLQGNIQSYVARDNIGEEAY 101

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  +   +    G ++    +     +  G+I + AQ++ +LS + ++ LP         
Sbjct: 102 KEFKKMDI----GDIVGIKGDVFRTKM--GEISIHAQEVTLLSKSLQI-LPEKFHGLTNT 154

Query: 123 SIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +  +    +KR++II+++R  +  + F+E  TPIL +++   A    
Sbjct: 155 DLRYRQRYVDLIMNPDVKDTFIKRSKIISAIRKYLDGQGFMEVETPILVSNAGGAAARPF 214

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     + L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 215 ETHFNALNEDFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQ 273

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKP 291
           ++ + + +++  EN+ R V +E      ++ N         F RI   DA+++Y G D  
Sbjct: 274 AYTDYNGMMDLTENLYRYVAQEVLGTTKITYNGVEMDLGKPFERITMVDAVKKYAGVDWN 333

Query: 292 DLRNPIIMHNVTEHFV 307
           +++       + +   
Sbjct: 334 EVQTLKEARALAKEHK 349



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 5/130 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  I          +    + K  D       +++   NG+E+A+     +  
Sbjct: 365 FFEEFAEEHLIQPTFVMDHPIEISPLTKKKPD-NPEYTERFEFFMNGWEMANAYSELNDP 423

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F          +            A +  MPP GGI  GIDR+ MLL  +  +R
Sbjct: 424 IDQRERFKAQEELLAQGDEEANTTDEDFMNALEIAMPPTGGIGFGIDRMCMLLTDSAAIR 483

Query: 558 EVSLFPMSQN 567
           +V LFP  ++
Sbjct: 484 DVLLFPTMKS 493


>gi|332534753|ref|ZP_08410581.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035840|gb|EGI72324.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 511

 Score =  223 bits (568), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 102/580 (17%), Positives = 197/580 (33%), Gaps = 119/580 (20%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H   DL             ++   V ++G +   R      F  I+D  G  Q  A+ 
Sbjct: 37  REHYTADLQAQFGDKSKEELVELQEVVSIAGRILAKRGP----FFVIQDMKGRVQAYASK 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     + K ++ ++     G ++        +    G + +   + ++L+ +   PLP 
Sbjct: 93  D-----VQKDLKEKYGQLDTGDIIGVKGALNKSG--KGDLYVEMTEYQLLTKSLR-PLPE 144

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  +++ R++DL  +   +   + R++++  +R  +   +F+E  TP+L    
Sbjct: 145 KFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVEGIRRFLADRDFMEVETPMLQVIP 204

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   +   P 
Sbjct: 205 GGASARPFVTHHNALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSTRHNP- 262

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  ++   ++ +  D++N  E++LR V E       V N       D+      + + D
Sbjct: 263 EFTMIEFYQAYADYIDLMNITEDMLRTVAENVLGSAIVVNT----TKDENGEVIDSVEYD 318

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P    ++ +  +      F   +  +P                   + +  +A+   
Sbjct: 319 FGQPFTRLSMADAILKYNPE-FDAAVFNDPEN---------------HFEELKAYAKQ-- 360

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
                 +  ++ E+        + +         +             FI G P +    
Sbjct: 361 ------VHVKIPENCVWGPGKFLCEIFEETAEHMLIQPT---------FITGYPWEVSPL 405

Query: 413 AADARNHIAQELGIINCNCFEFCWIMD-FPFYEWNEE-EKKIDFAHNPFTMPQGGMESLK 470
              AR +        + N F    + D F F+    E        ++     +     ++
Sbjct: 406 ---ARRN--------DENPF----VTDRFEFFVGGRELANGFSELNDAQDQAERFTRQVE 450

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D    +A  YD                                           RA +
Sbjct: 451 EKDAGDDEAMHYD---------------------------------------EDYIRALE 471

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+PP  G   GIDR+VML   +  +++V LFP  +   D
Sbjct: 472 YGLPPTAGEGIGIDRLVMLFTDSSTIKDVILFPHMRPQAD 511


>gi|109897686|ref|YP_660941.1| lysyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|109699967|gb|ABG39887.1| lysyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 517

 Score =  223 bits (568), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 101/556 (18%), Positives = 188/556 (33%), Gaps = 106/556 (19%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + ++G  V ++G +   R      FL ++D  G  Q  A+ D+      K +++ +    
Sbjct: 56  LEELGKVVSIAGRILAKRGP----FLLLQDMTGRIQAYASKDTQ-----KDIKARYTSLD 106

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    E   +    G + ++  + ++L+ +   PLP        +  +++ R++DL
Sbjct: 107 IGDIIGVKGELHKSG--KGDLYVNMNEYQLLTKSLR-PLPEKFHGLADQETKYRQRYVDL 163

Query: 134 RRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +   + R++I+  +R  +    F+E  TP+L        A+ F           
Sbjct: 164 ITNQQTRETFMIRSKIVTGIRNFLSERKFMEVETPMLQVIPGGATAKPFNTHHNALDIDM 223

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  L+   ++ +  D++N
Sbjct: 224 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMLEFYQAYADYQDLMN 281

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E +LR V ++      V N                            NV E   +   
Sbjct: 282 LTEEMLRTVAQDVLGTAIVKNTIK---------------------DTEGNVVEEKTYDFG 320

Query: 312 RVFSKILSVNPGYEVWAIPAKGG-GGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
           + F ++       + W            A  D +   A+         +  +  E   + 
Sbjct: 321 QPFQRLTMSEAVIKYWPEANVAAINDPEAHLDELKAMAKQ--------LHIKEPEVDGIW 372

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
           G G             I      +  D   FI   P +                      
Sbjct: 373 GAGK--------YLCEIFEATAEEQLDQPTFITAYPWEVS-------------------- 404

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
                     P    N++     F  + F    GG E                 + NGF 
Sbjct: 405 ----------PLARRNDDN---HFVTDRFEFFVGGRE-----------------LANGFS 434

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
             +            +  +      +   +      RA + G+PP  G   GIDR+VML 
Sbjct: 435 ELNDSEDQEARF--RKQVAEKDAGDDEAMHFDDDYIRALEYGLPPTAGEGIGIDRLVMLF 492

Query: 551 LGAKNVREVSLFPMSQ 566
             +  +++V LFP  +
Sbjct: 493 TDSPTIKDVILFPHMK 508


>gi|148381459|ref|YP_001256000.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153932316|ref|YP_001385834.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153936702|ref|YP_001389241.1| lysyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|229559854|sp|A7FZA5|SYK_CLOB1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|229559855|sp|A5I7P4|SYK_CLOBH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|148290943|emb|CAL85079.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152928360|gb|ABS33860.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152932616|gb|ABS38115.1| lysine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 504

 Score =  223 bits (568), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 71/327 (21%), Positives = 136/327 (41%), Gaps = 24/327 (7%)

Query: 5   RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++        G  V ++G +   R HG   F DI D YG  Q+    +    E 
Sbjct: 44  RTHTSKEVKENYEDLEGKTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEK 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  ++  +    G ++S +         TG+  +     +++  +   PLP        
Sbjct: 104 LKEYKTFDI----GDIISVTGTVF--KTKTGETSIHITDFQLVCKSLR-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR-D 179
             +R++ R++DL  +  +    +KRT II +MR  +  + F+E  TPIL+  +   A   
Sbjct: 157 PDLRYRQRYVDLIINQDVRDTFMKRTAIIKTMREYLDNKGFLEVETPILSPIAGGAAAKP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+  GF++ ++I   FR+E       P EF  +++
Sbjct: 217 FITHHNALNIDMY-LRIATELYLKRLIVGGFEKVYEIGRNFRNEGMDIRHNP-EFTVIEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY-GTD 289
             ++ + +D++   EN++  + E+      V            + R+   DA+R Y G D
Sbjct: 275 YEAYADYNDMMEITENMIAYICEKVLGTTKVQYEGTEIDFTPPWRRLTMVDAVREYAGVD 334

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSK 316
              +++ I    + +       +    
Sbjct: 335 FNTIKDDIEARTIAKEKHIEFKKELKD 361


>gi|197285859|ref|YP_002151731.1| lysyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227356360|ref|ZP_03840748.1| lysyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|238693207|sp|B4F0M6|SYK_PROMH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|194683346|emb|CAR44053.1| lysyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227163470|gb|EEI48391.1| lysyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 504

 Score =  223 bits (568), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 79/357 (22%), Positives = 141/357 (39%), Gaps = 31/357 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   S  +L  ++V   V ++G +   R  G   F  ++D  G  Q+  + D     +
Sbjct: 50  QKYDAMSAEELDAANV--EVAIAGRMMTRRIMGKASFATLQDMGGRIQLYVSRDDLPEGV 107

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 +W L   G ++            TG++ +   ++ +L+ A   PLP        
Sbjct: 108 YNEQFKKWDL---GDIL--GGRGRVFKTKTGELSIHCTELRLLTKALR-PLPDKFHGLAD 161

Query: 122 ESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           +  R++ R+LDL  +   +N    R++I++++R  M+ + F+E  TP++ T      AR 
Sbjct: 162 QETRYRQRYLDLISNENSRNTFKIRSKIMSAIRQFMVNKGFMEVETPMMQTIPGGASARP 221

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  +++
Sbjct: 222 FITHHNALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGV-SPRHNPEFTMMEL 279

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            M++ +  D++   E + R + ++                   I +YG ++ D   P   
Sbjct: 280 YMAYADYRDLIELTEELFRTLTQDVLGST--------------IVKYGDEEFDFGKPFEK 325

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEWARSQ 351
             + E             L         A        K  G  R  C+   E A S 
Sbjct: 326 LTMKEAICKYRPETNMADLDDMDKAVAIAQSIGIKIEKSWGLGRVQCEIFEEVAESH 382



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 75/239 (31%), Gaps = 22/239 (9%)

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
              R   +   E  R+  Q  L     +  +        P  K          R   +M 
Sbjct: 284 ADYRDLIELTEELFRTLTQDVLGSTIVKYGDE-EFDFGKPFEKLTMKEAICKYRPETNMA 342

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
           D D       D     + +   +   +  LG + C  FE               E  +  
Sbjct: 343 DLDDM-----DKAVAIAQSIGIKIEKSWGLGRVQCEIFEEV------------AESHLIQ 385

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
                  P       + ND       +++    G EI +G    + ++   + F      
Sbjct: 386 PTFIIEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAQDQAERFEEQVRQ 445

Query: 515 KEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           KE  ++           A + G+PP  G+  GIDR+VML   +  +R+V LFP  +   
Sbjct: 446 KEAGDDEAMFFDHDYITALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMRPGK 504


>gi|312136815|ref|YP_004004152.1| aspartyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224534|gb|ADP77390.1| aspartyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 438

 Score =  223 bits (568), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 98/350 (28%), Positives = 158/350 (45%), Gaps = 29/350 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           + RTH   ++     G  V L GWVH +R  GGI+FL +RD  GI QV A       E+ 
Sbjct: 7   KKRTHYSDEITPDMDGKKVSLVGWVHEIRDLGGIVFLLLRDREGIIQVTAPSKKVDKELM 66

Query: 63  KSVRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGER 118
             +R    E V+ ++G V   S    N       +E+     EI++ +++  PL   G+ 
Sbjct: 67  DKMRKSGKESVIFVEGTVKESSKAPNN-------VEIIPTNFEIINKSKQPLPLDTTGKV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +     R   RFLDLR+  ++     R +++NS+R       FIE +TP L AS+ EG  
Sbjct: 120 KAELDTRLDARFLDLRKLNVNAIFKIRNKMLNSVRKFFEENGFIEINTPKLVASATEGGT 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                +   + +F  L Q+PQ YKQ++MA+GF++ ++I P FR E+  + R   E   +D
Sbjct: 180 ALFPVTYFEREAF--LGQSPQLYKQMMMAAGFEKVYEIGPIFRAEEHDTLRHLNEAISID 237

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNT------------VSNNFLRICYDDAIRRY 286
           +E+SF   +D++  +EN++  V E+ +                    F RI YD+ I   
Sbjct: 238 IEVSFANHEDVMKILENLIVRVIEDLNKSCKKELKILNKKLEVPETPFERITYDEVIEIV 297

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSEFR----VFSKILSVNPGYEVWAIPAK 332
            +    L     +    E  +  E      +     S+ P Y +      
Sbjct: 298 NSKGVVLEYGEDLSRAAEKALGEEMDNYYFIIDWPTSIKPFYVMPNEKNP 347



 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 89/262 (33%), Gaps = 36/262 (13%)

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG-QPGLAYIFWRLDESGNVAGM 372
           F K+  + P +                 D    +A  +     L  +  R+ E  N +  
Sbjct: 209 FEKVYEIGPIFRAEEHDTLRHLNEAISIDIEVSFANHEDVMKILENLIVRVIEDLNKSCK 268

Query: 373 GPVA---KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
             +    K L +  T   R+       D    I         +  D      + LG    
Sbjct: 269 KELKILNKKLEVPETPFERITY-----DEVIEIVNSKGVVLEYGEDLSRAAEKALG---E 320

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
               + +I+D+P             +  PF +           +      + +DL+    
Sbjct: 321 EMDNYYFIIDWP------------TSIKPFYVMPNE------KNPEKC--YAFDLMYKDL 360

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI+SG +R H  +++++      ++       F     AF+ GMPPH G   G +R +M 
Sbjct: 361 EISSGAMRIHDHDLLVKRIKEQDLNP----ESFKYYLDAFKYGMPPHAGWGLGAERFMMA 416

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           L G KN+RE  LFP  +     
Sbjct: 417 LTGVKNIRETILFPRDRRRLTP 438


>gi|253681352|ref|ZP_04862150.1| lysine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253562590|gb|EES92041.1| lysine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 510

 Score =  223 bits (567), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 82/382 (21%), Positives = 149/382 (39%), Gaps = 34/382 (8%)

Query: 5   RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+   +        G  V ++G +   R HG   F DIRD YG  Q+    D    E 
Sbjct: 53  RTHTSKQVKDNYDELEGKNVTVAGRLMSKRVHGKAGFSDIRDRYGKIQLYIKIDDVGEEK 112

Query: 62  AKSVRSEWV---LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            K  ++  +   + I G V             TG++ L     ++L+ + + PLP     
Sbjct: 113 LKEYKTFDIGDFVSITGTV---------FKTKTGEVTLHIVDFKLLTKSLK-PLPEKFHG 162

Query: 119 EYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                +R++ R++DL  +  + +  +KRT II ++R  +   +F+E  TPIL+  +   A
Sbjct: 163 LKDPDLRYRQRYVDLIMNEDVRETFMKRTAIIKAIREFLDNRDFLEVETPILSPIAGGAA 222

Query: 178 R-DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
              F+          Y L  A + Y + L+  GF++ ++I   FR+E       P EF  
Sbjct: 223 AKPFITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP-EFTA 280

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +++  ++ + +D++   EN++  V E+ +    V      I +    RR           
Sbjct: 281 IELYEAYADYNDMMEITENMVAYVCEKVNGTTKVMYEGTEIDFKPPWRR----------- 329

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           I M +  + F   +F   +         +   +  K    +    D +       G+  L
Sbjct: 330 ITMVDAVKEFAGVDFNEVNTDEEAREIAKEKGLELKKELKDCTKGDILVALFEEFGEEKL 389

Query: 357 AYIFWRLDESGNVAGMGPVAKH 378
               +  D         P+ K 
Sbjct: 390 MQPTFVCDYPKEN---SPLTKK 408


>gi|187935723|ref|YP_001884425.1| lysyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187723876|gb|ACD25097.1| lysine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 501

 Score =  223 bits (567), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 71/353 (20%), Positives = 141/353 (39%), Gaps = 25/353 (7%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++        G  V ++G +   R  G ++F DI D  G  Q+    D    E 
Sbjct: 44  RTHTSEEVKSNYEELEGKNVTVAGRIMSKRGQGKVVFSDIHDRDGKIQLFIKIDLVGEES 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            KS ++  +    G  +  + E       TG++ +     E++  + + PLP        
Sbjct: 104 LKSYKTYDL----GDWVVATGEVFTTK--TGEVSVKVSNFELICKSLK-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR-D 179
             +R++ R +D+  +   K   +KR++II+ +R  +  + F+E  TPIL   +   A   
Sbjct: 157 PDLRYRQREVDIITNPEVKETFIKRSKIISGIREFLDTKGFLEVETPILAPIAGGAAAKP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+ +GF++ ++I   FR+ +  S R   EF  +++
Sbjct: 217 FVTHHNTLDIDMY-LRIATELYLKRLVVAGFEKVYEIGRNFRN-EGMSVRHNPEFTAIEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D++   EN++  V E+ +    V+     I +    RR           + M
Sbjct: 275 YEAYSDYNDMMEITENMVAYVCEKVNGTTKVTYQGTEIDFMPPWRR-----------VTM 323

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
            +V +     +F             +   +            + +N      G
Sbjct: 324 VDVVKEHAGVDFTTIKSDEEAQAIAKEKHLEFAKPLNTVTKGEVLNALYEEFG 376


>gi|331083387|ref|ZP_08332499.1| hypothetical protein HMPREF0992_01423 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330404080|gb|EGG83628.1| hypothetical protein HMPREF0992_01423 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 650

 Score =  223 bits (567), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 137/354 (38%), Gaps = 30/354 (8%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   ++        G  V L+G +   R  G   F  I+D  G  Q     D+   +  
Sbjct: 43  THHSMEVKDAFEELEGKSVSLAGRMMSKRVMGKASFCSIQDVQGSIQSYVARDNIGEDHY 102

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  +   +  I G+      +       TG+I + A ++ +LS + + PLP         
Sbjct: 103 KDFKKMDIGDIVGI------KGEVFKTKTGEISIHATEVTLLSKSLK-PLPEKFHGLTNT 155

Query: 123 SIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +  +    +KR++II S+R  +  + F+E  TP+L A++   A    
Sbjct: 156 DLRYRQRYVDLIMNADVKDTFIKRSKIIASIRNYLNGQGFLEVETPMLVANAGGAAARPF 215

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     + L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 216 ETHFNALDEDFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQ 274

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +   +++  EN+ R V +E      +  N + +              DL  P     
Sbjct: 275 AYTDYHGMMDLTENLYRHVAQEVLGTTKIVYNGIEM--------------DLGKPFERIT 320

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM----NEWARSQ 351
           + +         F++I ++     V               D +     E+A   
Sbjct: 321 MVDAVKKYAGVDFNEIHTLEEARAVAKEHHVEFEERHKKGDILSLFFEEFAEEH 374



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F M     +  L      + +   +++   NG+E+A+     +
Sbjct: 366 FFEEFAEEHLIQPT---FVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAYSELN 422

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F          +            A + GM P GGI  GIDR+VMLL  +  
Sbjct: 423 DPIDQRERFKAQEELLAQGDEEANTTDEDFMNALEIGMAPTGGIGFGIDRMVMLLTDSAA 482

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  ++
Sbjct: 483 IRDVLLFPTMKS 494


>gi|331268358|ref|YP_004394850.1| lysyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329124908|gb|AEB74853.1| lysyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 510

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 73/318 (22%), Positives = 135/318 (42%), Gaps = 30/318 (9%)

Query: 5   RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+   +        G  V ++G +   R HG   F DIRD YG  Q+    D    E 
Sbjct: 53  RTHTSQQIKDNYDELEGKNVTVAGRLMSKRVHGKAGFSDIRDRYGKIQLYIKIDDVGEEK 112

Query: 62  AKSVRSEWV---LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            K  ++  +   + I G V             TG++ L     ++L+ + + PLP     
Sbjct: 113 LKEYKTFDIGDFVSITGTV---------FKTKTGEVTLHILDFKLLTKSLK-PLPEKFHG 162

Query: 119 EYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                +R++ R++DL  +  + +  +KRT II ++R  +    F+E  TPIL+  +   A
Sbjct: 163 LKDPDLRYRQRYVDLIMNEDVRETFMKRTAIIKAIREFLDNREFLEVETPILSPIAGGAA 222

Query: 178 R-DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
              F+          Y L  A + Y + L+  GF++ ++I   FR+E       P EF  
Sbjct: 223 AKPFITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDIRHNP-EFTA 280

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY- 286
           +++  ++ + +D++   EN++  V E+ +                 + RI   DA++ + 
Sbjct: 281 IELYEAYADYNDMMEITENMVAYVCEKVNGTTKVMYEGTEIDFKPPWRRITMVDAVKEFA 340

Query: 287 GTDKPDLRNPIIMHNVTE 304
           G D  ++        + +
Sbjct: 341 GVDFNEVNTDEEAREIAK 358


>gi|284162109|ref|YP_003400732.1| aspartyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284012106|gb|ADB58059.1| aspartyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 432

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 97/347 (27%), Positives = 159/347 (45%), Gaps = 33/347 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-- 58
           M R  T   GD    DVG  + L GWVH +R  GG+IF+ +RD  G  QV          
Sbjct: 1   MQRKWTSEIGD---EDVGKDILLYGWVHEIRDLGGLIFIILRDREGFIQVTLPKKKVPAE 57

Query: 59  -FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFG 116
            FE+AK ++ E V+ + G V                 E+  ++IE+L+ AE  LPL V  
Sbjct: 58  TFELAKKLKRESVIKVVGTVKKEPK-------APQGYEVIPKEIEVLNEAEVPLPLEVTE 110

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           +       R  +RFLDLR+  +      R +++ S+R  +    FIE +TP + +++ EG
Sbjct: 111 KVPAELDTRLDHRFLDLRKPKIQAIFRIRHQMLQSVRAFLCEHGFIEVNTPKIVSTATEG 170

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +    S   + +F  L Q+PQ YKQ+LM++GF+R F+I P FR E+  + R   E   
Sbjct: 171 GTELFPISYFEKEAF--LNQSPQLYKQILMSAGFERVFEIGPIFRAEEHNTTRHLNEAIS 228

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEF------------SNGNTVSNNFLRICYDDAIR 284
           +D+EMSF + + ++  +E ++  V+E+                +  S  F R+ YD+A+ 
Sbjct: 229 IDIEMSFTDHEGVMKILEELIVRVYEDVVENCEKFLNWLNLKLDIPSLPFERVTYDEALE 288

Query: 285 RYGTDKPDLRNPIIMHN-----VTEHFVHSEFRVFSKILSVNPGYEV 326
                  ++     +       + E      + +        P Y +
Sbjct: 289 IARKKGEEIPWGEDLTTPALRALAEEIGDVHYFIVDWPTECKPFYAM 335



 Score =  102 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 31/154 (20%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             R  +A+E+G +        +I+D+P                PF               
Sbjct: 307 ALR-ALAEEIGDV------HYFIVDWP------------TECKPFYAMPYED-------- 339

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
                  +DL+    E+ASG  R H  ++++++    G++       F     AF+ GMP
Sbjct: 340 RPEICKSFDLMKGPLELASGTQRIHKYDMLVESIKAKGLNP----ESFEFYLEAFRYGMP 395

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PH G   G +R++M +L  KN+RE  LFP  ++ 
Sbjct: 396 PHAGWGLGAERLLMSMLNLKNIREAVLFPRDRHR 429


>gi|300722131|ref|YP_003711414.1| lysine tRNA synthetase, constitutive [Xenorhabdus nematophila ATCC
           19061]
 gi|297628631|emb|CBJ89209.1| lysine tRNA synthetase, constitutive [Xenorhabdus nematophila ATCC
           19061]
          Length = 504

 Score =  222 bits (566), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 78/356 (21%), Positives = 143/356 (40%), Gaps = 31/356 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   +  +L   ++G  V ++G +   R  G   F  ++D  G  Q+  + D     I 
Sbjct: 51  KYDDKTKEEL--EELGIEVTVAGRMMTRRIMGKASFATLQDMGGRIQIYVSRDDLPEGIY 108

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +   +W L   G ++    +       TG++ +   ++ +L+ A   PLP        +
Sbjct: 109 NTQFKKWDL---GDILGARGKLF--KTQTGELSIHCTELRLLTKALR-PLPDKFHGLADQ 162

Query: 123 SIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL  +   +     R+R+++++R  M +++F+E  TP++ A      AR F
Sbjct: 163 ETRYRQRYLDLISNDESRKAFQIRSRVMSALRNFMTSKDFMEVETPMMQAIPGGASARPF 222

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ 
Sbjct: 223 ITHHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SPRHNPEFTMMELY 280

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M++ +  D++   E + R + +E                   + +YG  + D   P    
Sbjct: 281 MAYADYQDLIVLTEELFRTLTQEVLGTT--------------LVQYGEQEFDFGKPFTKM 326

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEWARSQ 351
            + E             L         A        KG G  R  C+   E A S 
Sbjct: 327 TMKEAICKYRPETNMADLDDMDKAVAIAESLGIEVEKGWGLGRVQCEIFEETAESH 382



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 56/337 (16%), Positives = 104/337 (30%), Gaps = 32/337 (9%)

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA--IRRYGTDKPDLR 294
           +    +F+   D +     +++ +          ++    I + +A  I  Y    P+L 
Sbjct: 190 MSALRNFMTSKDFMEVETPMMQAI-------PGGASARPFITHHNALDIDMYLRIAPELY 242

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-NEWARSQGQ 353
              ++    E          ++ +S     E   +       +      +  E  R+  Q
Sbjct: 243 LKRLVVGGFERVFEINRNFRNEGISPRHNPEFTMMELYMAYADYQDLIVLTEELFRTLTQ 302

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
             L     +  E        P  K          R   +M D D       D     + +
Sbjct: 303 EVLGTTLVQYGEQ-EFDFGKPFTKMTMKEAICKYRPETNMADLDDM-----DKAVAIAES 356

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                     LG + C  FE               E  +         P       + ND
Sbjct: 357 LGIEVEKGWGLGRVQCEIFE------------ETAESHLIQPTFITAYPAEVSPLARRND 404

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAF 529
                  +++    G EI +G    + +E   + F+     K+  ++           A 
Sbjct: 405 DNPFITDRFEFFIGGREIGNGFSELNDAEDQAERFAEQVRQKDDGDDEAMFYDEDYITAL 464

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + G+PP  G+  GIDR+VML   +  +R+V LFP  +
Sbjct: 465 EHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMR 501


>gi|168187058|ref|ZP_02621693.1| lysyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169295090|gb|EDS77223.1| lysyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 510

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 83/382 (21%), Positives = 148/382 (38%), Gaps = 34/382 (8%)

Query: 5   RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+   +        G  V ++G +   R HG   F DIRD YG  Q+    D    E 
Sbjct: 53  RTHTSEQIKDNYDELEGKNVIVAGRLMSKRVHGKAGFSDIRDRYGKIQLYIKIDDVGEEK 112

Query: 62  AKSVRSEWV---LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            K  ++  +   + I G V             TG+I L     ++L+ + + PLP     
Sbjct: 113 LKEYKTFDIGDFVSITGTV---------FKTKTGEITLHIVDFQLLTKSLK-PLPEKFHG 162

Query: 119 EYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                +R++ R++DL  +   K   +KRT II ++R  +   +F+E  TPIL+  +    
Sbjct: 163 LKDPDLRYRQRYVDLIMNEEVKETFMKRTAIIKAIREFLDNRDFLEVETPILSPIAGGAA 222

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + Y + L+  GF++ ++I   FR+E       P EF  
Sbjct: 223 ARPFVTHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDVRHNP-EFTA 280

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +++  ++ + +D++   EN++  V E+ +    V      I +    RR           
Sbjct: 281 IELYEAYADYNDMMEITENMVAYVCEKVNGTTKVMYEGTEIDFKPPWRR----------- 329

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           + M +  + +   +F             +   +  K    +    D +       G+  L
Sbjct: 330 VTMVDAVKEYAGVDFNEVKTDEEAREVAKEKGLELKKELKDCTKGDILVALFEEFGEEKL 389

Query: 357 AYIFWRLDESGNVAGMGPVAKH 378
               +  D         P+ K 
Sbjct: 390 MQPTFICDYPKEN---SPLTKK 408


>gi|116753936|ref|YP_843054.1| aspartyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|116665387|gb|ABK14414.1| aspartyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 434

 Score =  222 bits (565), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 98/359 (27%), Positives = 155/359 (43%), Gaps = 35/359 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH  G++     GS V L+G VH +R  GGI FL +RD  G+ QV       D    E 
Sbjct: 4   RTHYSGEIRPEMDGSEVTLAGHVHEIRDLGGICFLVLRDREGLAQVTVLTKRADRKLVET 63

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
            + V  E V+ + G V +               E+  + +E+LS A+  LPL   G+   
Sbjct: 64  VRGVSRESVVLVRGRVKAEPK-------APNGFEILPEAVEVLSRADSPLPLDPTGKVGA 116

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RFLDLRR          + ++ S+R     + FIE  TP + A++ EG    
Sbjct: 117 ELDTRLDARFLDLRRPASMAVFKIESAVMRSLRNTFYEKGFIEVCTPKIVATATEGGTAL 176

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S   + +F  L Q+PQ YKQ+LMA+G DR F+I P FR E+  + R   E   +D+E
Sbjct: 177 FPISYFEREAF--LNQSPQLYKQILMATGLDRVFEIGPIFRAEEHDTRRHLNEAISVDVE 234

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRR--- 285
           +S+ + +D+++ +EN +   +   S            + +     F RI Y +A+     
Sbjct: 235 VSYADHEDVMSLLENAVSSAYRYVSEICEKELQILGVDLDIPKTPFRRITYTEALEMASE 294

Query: 286 -------YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
                  +G D        +   + EH+  +++    K     P  +   I       +
Sbjct: 295 SGRKSMEWGDDIDTETEHYLGSLIGEHYFLTDWPSSVKPYYTQPYEDKPEICKGFDLMH 353



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 69/193 (35%), Gaps = 29/193 (15%)

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFC 435
               + + V LD+           + L+  S +         ++     +       E  
Sbjct: 263 EKELQILGVDLDIPKTPFRRITYTEALEMASESGRKSMEWGDDIDTETEHYLGSLIGEHY 322

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           ++ D+P                 +T P      +            +DL+    E+ASG 
Sbjct: 323 FLTDWP-----------SSVKPYYTQPYEDKPEI---------CKGFDLMHPSMELASGA 362

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            R H  E+++      G++       F    + F+ GMPPH G   G+ R+V  +LG +N
Sbjct: 363 QRVHDYELLISRIKEKGLNP----ESFEFYLKPFRYGMPPHAGWGLGLARLVQTMLGLEN 418

Query: 556 VREVSLFPMSQNF 568
           +R+  LFP  +  
Sbjct: 419 IRDAVLFPRDRRR 431


>gi|2129413|pir||JC4352 aspartate-tRNA ligase (EC 6.1.1.12) - Pyrococcus sp
 gi|1136773|dbj|BAA08115.1| aspartyl-tRNA synthetase [Pyrococcus sp.]
          Length = 438

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 105/437 (24%), Positives = 172/437 (39%), Gaps = 40/437 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACF 59
            YRTH   ++     G  V+++GWV  V+  GGI FL IRD  GI Q+ A     D   F
Sbjct: 1   MYRTHYSSEITEELNGQKVKVAGWVWEVKDLGGIKFLWIRDRDGIVQITAPKKKVDPELF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFGER 118
           ++   +RSE V+ ++G+V                 E+  +KI +L+ AE        G+ 
Sbjct: 61  KLIPKLRSEDVVAVEGVVNFTPK-------AKLGFEILPEKIVVLNRAETPLPLDPTGKV 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +     R   RF+DLRR  +      R+ +  ++R       FIE  TP + A++ EG  
Sbjct: 114 KAELDTRLDNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATEGGT 173

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +        + +F A  Q+PQ YKQ++MASG DR ++IAP FR E+  + R   E + +D
Sbjct: 174 ELFPMKYFEEDAFLA--QSPQLYKQIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSID 231

Query: 239 MEMSFV-EQDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAIRR 285
            EM+F+ +++++++ +E ++          N                 F R+ YD A+  
Sbjct: 232 SEMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDILNFELEEPKLPFPRVSYDKALEI 291

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
            G    ++     +    E  +              P Y ++  P++         D   
Sbjct: 292 LGDLGKEIPWGEDIDTEGERLLGKYMMENENA----PLYFLYQYPSEAKPFYIMKYDNKP 347

Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPV------AKHLNIVNTEAIRVRLDMQDGDSC 399
           E  R      L Y    +   G       +       K LN  + E              
Sbjct: 348 EICR---AFDLEYRGVEISSGGQREHRHDILVEQIKEKGLNPESFEFYLKAFRYGMPPHG 404

Query: 400 FFIAGDPLKFCSFAADA 416
            F  G   +      D 
Sbjct: 405 GFGLG-AERVIKQMLDL 420



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 4/103 (3%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +   D        +DL   G EI+SGG R H  +++++     G++       F    +A
Sbjct: 340 IMKYDNKPEICRAFDLEYRGVEISSGGQREHRHDILVEQIKEKGLNP----ESFEFYLKA 395

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           F+ GMPPHGG   G +R++  +L   N+REV LFP  +     
Sbjct: 396 FRYGMPPHGGFGLGAERVIKQMLDLPNIREVILFPRDRRRLTP 438


>gi|146302990|ref|YP_001190306.1| aspartyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|145701240|gb|ABP94382.1| aspartyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 429

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 85/268 (31%), Positives = 133/268 (49%), Gaps = 11/268 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V L+GWVH VR  GG  F+ +RD  GI QVV +  S  FE+AK 
Sbjct: 3   RTHFIQDVTPDLDGKEVVLAGWVHNVRDLGGKKFILLRDKSGIGQVVVDKTSPSFEVAKE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES 123
           +  E  + I G V +              +E+S  ++ ILS A+  LPL V  + +    
Sbjct: 63  LSQESAIQIKGTVKADKR-------APNGVEVSCSELRILSKAKAPLPLDVSDKVKADIE 115

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K R LDLRR  +   I  ++  + + R  +    F E  TP + A+  EG       
Sbjct: 116 VRLKERLLDLRRQEMQAMIRIQSTAVRTFRETLYKHGFYEIFTPKIIATGTEGGAQLFPV 175

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + +F A  Q+PQ YK+ L+A   +R F++AP +R E+  +     EF  +D+EM+F
Sbjct: 176 IYFGKEAFLA--QSPQLYKE-LLAGAVERVFEVAPAWRAEESDTPYHLAEFISMDVEMAF 232

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS 271
            + +D++  +E+V+  V E  +  +   
Sbjct: 233 ADYNDVMKIVEDVIANVLENVARNHQND 260



 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 70/228 (30%), Gaps = 43/228 (18%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF------- 412
           F  +D     A    V K +  V    +         D        P             
Sbjct: 223 FISMDVEMAFADYNDVMKIVEDVIANVLENVARNHQNDLAILNHRLPSITRPIKRVTYEE 282

Query: 413 ------AADARNHIAQELGIINCNCFE------FCWIMDFPFYEWNEEEKKIDFAHNPFT 460
                 +         ++G                +I D+P                PF 
Sbjct: 283 AIEILQSQGLPTKFGDDIGTPESRVLNKVLEQDLYFITDWP------------AEARPFY 330

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
             +               +  +DLV    E+ SG  RNH  EV+ +     G++      
Sbjct: 331 TKRRED--------NPKISESFDLVYRWLELVSGSSRNHTREVLERELRARGLNPI---- 378

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            F    + F  G+PPH G   G+ R +++L G ++V+EVSLFP  +  
Sbjct: 379 NFEFFLKWFDYGIPPHAGFGMGLQRFMLMLTGLQSVKEVSLFPRDKKR 426


>gi|198275661|ref|ZP_03208192.1| hypothetical protein BACPLE_01833 [Bacteroides plebeius DSM 17135]
 gi|198271290|gb|EDY95560.1| hypothetical protein BACPLE_01833 [Bacteroides plebeius DSM 17135]
          Length = 575

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 106/600 (17%), Positives = 201/600 (33%), Gaps = 130/600 (21%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +         V ++G +   R  G   F++++D  G  QV    D  C + 
Sbjct: 36  NAFSTDIKAEFKDDAEPRKVSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPDE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + AQK+ +LS +      V  +    
Sbjct: 96  NKDLYNVVFKRLLDLGDFVGIEGFVFRTQMGEISIHAQKLTVLSKSIRPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R++DL  +  + +  +KR ++ NSMR    ++ +IE  TPIL + + 
Sbjct: 156 YDKFEDPELRYRQRYVDLVVNDGVKEIFLKRNKVYNSMREYFNSKGYIEVETPILQSIAG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y +  A + Y + L+  GF+  ++I   FR+E          
Sbjct: 216 GAAARPFITHHNALDIPLY-MRIASELYLKRLIVGGFEGVYEIGKNFRNEG--------- 265

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
                           ++   N                  F  +    A + Y       
Sbjct: 266 ----------------MDRTHN----------------PEFTCMEIYVAYKDYNWMMKFT 293

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
            N +I     +    +E +V   +++    ++   +            D + E+      
Sbjct: 294 EN-MIEKICLDVNGTTEVQVGDNVINFKAPFKRVTM-----------LDSIKEFTGY--- 338

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                     D +G           +N      +  +L+M+  D+               
Sbjct: 339 ----------DLTG-----------MNEEQIREVCKKLNMEIDDTMGK------------ 365

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               + I  E      N  +  +I D+P               +P T        L    
Sbjct: 366 GKLIDEIFGEFC--EGNYIQPTFITDYP------------IEMSPLTKKHRSNPDL---- 407

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
                  +++L+ NG E+ +     +     L+ F       E  ++          RA 
Sbjct: 408 -----TERFELMVNGKELCNAYSELNDPIDQLERFEEQMRLSEKGDDEAMIIDKDFVRAL 462

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           + GMPP  G+  G+DR+VML+ G   ++EV  FP  +    +   +P+        ELG+
Sbjct: 463 EYGMPPTSGMGIGMDRLVMLMTGQSTIQEVLFFPQMRPEKVIPKDAPAK-----FMELGI 517


>gi|296113238|ref|YP_003627176.1| lysyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295920932|gb|ADG61283.1| lysyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|326560229|gb|EGE10617.1| lysyl-tRNA synthetase [Moraxella catarrhalis 7169]
 gi|326566453|gb|EGE16603.1| lysyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326570260|gb|EGE20305.1| lysyl-tRNA synthetase [Moraxella catarrhalis BC8]
 gi|326570997|gb|EGE21021.1| lysyl-tRNA synthetase [Moraxella catarrhalis BC7]
 gi|326576889|gb|EGE26795.1| lysyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 507

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 99/578 (17%), Positives = 187/578 (32%), Gaps = 138/578 (23%)

Query: 7   HSCGDLGVS---------DVGSFV--RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           + CGDL            + G  V  +++G V   R      F+ I+D     Q+  +  
Sbjct: 50  NYCGDLQAQFDGVDKATIESGDKVYAKVAGRVMLNRGS----FIVIQDMTDRIQLYVDRK 105

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E  + ++S  +  I       +A         G + +  +  E+L+ +   PLP  
Sbjct: 106 GLPSETLELIKSLDLGDI------VAASGYIGRSGKGDLYVHLEAFELLTKSLR-PLPDK 158

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   ++++ R+LDL  +   +N    R +++  +R  +  E F+E  TP++     
Sbjct: 159 FHGLTDTEVKYRKRYLDLMVNEETRNTFAIRAKVVAGIRAFLTQERFMEVETPMMHVIPG 218

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   +   P E
Sbjct: 219 GASARPFVTHHNALDMQLY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGVSTRHNP-E 276

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  ++   +                     +++   +     R+    A+   G+     
Sbjct: 277 FTMIEFYQA---------------------YADYKDLMALTERMLETLAMDILGS----- 310

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
                    T+     E   F                 KG        D + E+      
Sbjct: 311 ---------TDVSYQGEVFSF-----------------KGPFKKITMFDAILEYNSDFSA 344

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                         ++     +AK +     + ++    +    +  F      K     
Sbjct: 345 D-------------DINDREFLAKFVKDELKQEVKPSFGLGKLQTIVFEETVETKLRQ-- 389

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                                 +I ++P      E   +                 + ND
Sbjct: 390 --------------------PTFITEYP-----AETSPLA----------------RRND 408

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAF 529
                  ++++   G E+A+G    +      + F      K+  ++           A 
Sbjct: 409 TNPHVTDRFEMFIGGRELANGFSELNDPIDQAERFRAQVAEKDAGDDEAMHYDADFIEAL 468

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + G+PP  G   GIDR+VML   A ++R+V LFP  ++
Sbjct: 469 EYGLPPTAGEGIGIDRLVMLFADAASIRDVILFPHMRH 506


>gi|240143458|ref|ZP_04742059.1| lysine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257204491|gb|EEV02776.1| lysine--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 645

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 65/289 (22%), Positives = 129/289 (44%), Gaps = 18/289 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            +  G  V ++G +   R  G   F +I+D  G  QV    D+   EI K  R   +  I
Sbjct: 52  ETMEGKQVSIAGRMMFKRVMGKASFCNIQDLKGRIQVYVARDNIGEEIYKDFRKSDIGDI 111

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      +       TG+I + A+++ +LS + ++ LP          +R++ R++DL
Sbjct: 112 WGV------KGYAFRTKTGEISIHAEEMTLLSKSLQI-LPEKFHGLTDTDMRYRQRYIDL 164

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   K   +KR++I+  +R  +   +F+E  TP+L +++   A               
Sbjct: 165 IMNQESKEVFIKRSKILKEIRNFLADRDFMEVETPMLVSNAGGAAARPFETHYNALNEDV 224

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++  
Sbjct: 225 KLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMEL 283

Query: 253 MENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
            E++ R + E+      +S N         F R+  +DAI++Y     D
Sbjct: 284 TESMFRYLAEKVCGSTKISYNGIEIDLGKPFTRMTMNDAIKKYTGIDFD 332



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K +D   +   +++L  N +E+ +     +      + F+    +    ++         
Sbjct: 393 KPSDPTKV--ERFELFINTWEMCNAYSELNDPVDQRERFAAQDANAAAGDDEAEHTDEDF 450

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++
Sbjct: 451 LNALEIGMPPTGGIGYGIDRLVMLLTDSAAIRDVLLFPTMKS 492


>gi|134298053|ref|YP_001111549.1| lysyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|134050753|gb|ABO48724.1| lysyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 510

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 63/337 (18%), Positives = 128/337 (37%), Gaps = 25/337 (7%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   D+        G  V ++G +   R  G   F +I+D  G  QV A  +    E  
Sbjct: 56  THYTFDITERFEEMEGQTVTIAGRITAKRVMGKASFANIQDSRGNIQVYARLNDLGAEEY 115

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +    +  I G                G+I +     ++LS +   PLP         
Sbjct: 116 ARLEKLDIGDIIGCYGKV------FRTRKGEITVHIDSYKLLSKSLR-PLPEKWHGLKDV 168

Query: 123 SIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDF 180
            +R++ R++DL     + +  + R+R++  +R  +    F+E  TP++   +    AR F
Sbjct: 169 DLRYRQRYVDLIVNPEVKQTFITRSRVVRGIRNYLDQRGFLEVETPMMHPIAGGASARPF 228

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +        + Y +  AP+ Y + L+  GFD+ ++I   FR+E   +   P EF  +++ 
Sbjct: 229 ITHHNTLDMNLY-MRIAPELYLKRLLVGGFDKVYEINRNFRNEGISTRHNP-EFTTIELY 286

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ + +D+++  E+++  V ++      V    + I      RR           + M 
Sbjct: 287 QAYADYNDMMDLTEDLISQVAQDVLGTTMVEYEGVEISLAKPWRR-----------VPML 335

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            + +     +F             +   +  +     
Sbjct: 336 EIVKEHSGLDFSQLKDAKEAFEAAKGLGLDVEPSASW 372



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 4/93 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVM----LQAFSNVGISKEVVENRFGGLYRAFQCGM 533
             ++++L   G E+A+     +         +          E  +       +A + GM
Sbjct: 414 LTYRFELFIYGRELANAFSELNDPIDQKGRFMSQVEKRNAGDEEAQMYDEDFIQALEYGM 473

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG+  GIDR+VMLL  + ++R+V LFP+ +
Sbjct: 474 PPAGGLGIGIDRLVMLLTNSSSIRDVILFPLMR 506


>gi|326391795|ref|ZP_08213313.1| lysyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325992153|gb|EGD50627.1| lysyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 547

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 71/318 (22%), Positives = 133/318 (41%), Gaps = 30/318 (9%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SAC 58
           RT+   D+     +  G  V L+G +   R HG   F DI+D  G  Q+    D      
Sbjct: 92  RTNVSSDIKNDYENFEGKVVTLAGRIMSKRAHGKASFADIQDRDGRIQIYVKYDTVGEKN 151

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +EI K +    ++ + G V             TG+I +     ++LS + ++ LP     
Sbjct: 152 YEIFKILDIGDIIGVTGEV---------FKSKTGEITIRVTDFKLLSKSLQI-LPEKWHG 201

Query: 119 EYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                +R++ R+ DL     + +  +KRT+II ++R  +    F+E  TPIL T +    
Sbjct: 202 LKDPDLRYRQRYTDLIINPEVKEVFLKRTKIIKAIREFLDNRGFLEVETPILHTIAGGAA 261

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ +++   FR+E       P EF  
Sbjct: 262 ARPFITHHNALDIDMY-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNP-EFTL 319

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY- 286
           L++  ++ +   ++   E +   V ++ +    +            + RI   DAI+ Y 
Sbjct: 320 LELYEAYTDYYGMMELTEQLFAYVAQKVNGTTKIVYQGTEIDLTPPWKRITMVDAIKEYV 379

Query: 287 GTDKPDLRNPIIMHNVTE 304
           G D  +++       + +
Sbjct: 380 GVDFNEVKTDAEAVEIAK 397



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 20/240 (8%)

Query: 340 FCDRMNEWARSQGQPGL-----AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
             +    +    G   L     AY+  +++ +  +   G        ++      R+ M 
Sbjct: 319 LLELYEAYTDYYGMMELTEQLFAYVAQKVNGTTKIVYQG------TEIDLTPPWKRITMV 372

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
           D     ++  D  +  + A      IA+ L +      +   ++    ++   E+  I  
Sbjct: 373 DAIKE-YVGVDFNEVKTDAEAV--EIAKRLNLETKEGMQKGEVI-ALVFDELVEQHLIQP 428

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
                   +    + + +D       +++    G E+A+     +      + F      
Sbjct: 429 TFVMDYPVEISPLAKRKHD-NPAFTSRFEAFIYGREVANAFSELNDPIDQKERFLEQLKQ 487

Query: 515 KEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +E  +            A + GMPP GG+  G+DR+VM +  A ++R+V LFP  +   D
Sbjct: 488 REAGDEEAHMMDEDFINALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILFPTMKPRND 547


>gi|331086545|ref|ZP_08335623.1| hypothetical protein HMPREF0987_01926 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330410378|gb|EGG89810.1| hypothetical protein HMPREF0987_01926 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 649

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 64/316 (20%), Positives = 138/316 (43%), Gaps = 22/316 (6%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   D+        G  V ++G +   R  G   F +++D  G  Q     D+   E  
Sbjct: 42  THHSMDIKDHFEEMEGKDVAIAGRIMSKRVMGKASFCNVQDLQGNIQSYVARDNIGEEAY 101

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K+ +   +    G ++    +     +  G+I + AQ++ +LS + ++ LP         
Sbjct: 102 KAFKKMDI----GDIVGIKGDVFRTKM--GEISIHAQEVTLLSKSLQI-LPEKFHGLTNT 154

Query: 123 SIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +  +    +KR++I++++R  +  + F+E  TPIL +++   A    
Sbjct: 155 DLRYRQRYVDLIMNPDVKDTFIKRSKILSAIRKYLDGQGFMEVETPILVSNAGGAAARPF 214

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     + L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 215 ETHFNALNEDFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQ 273

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY-GTDKP 291
           ++ + + +++  EN+ R V +E      ++           F RI   DA+++Y G D  
Sbjct: 274 AYTDYNGMMDLTENLYRFVAQEVLGTTKITYGGVEMDLGKPFERITMVDAVKKYTGIDWN 333

Query: 292 DLRNPIIMHNVTEHFV 307
           ++        + +   
Sbjct: 334 EVTTLKEARELAKEHK 349



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 56/160 (35%), Gaps = 30/160 (18%)

Query: 417 RNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           R+     L +     +  +  +  ++MD P               +P T  +        
Sbjct: 355 RHKKGDILSLFFEAFVEEHLIQPTFVMDHP------------IEISPLTKKKPENPEY-- 400

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYR 527
                    +++   NG+E+A+     +        F          +            
Sbjct: 401 -------TERFEFFMNGWEMANAYSELNDPIDQRARFKAQEELLAQGDEEANTTDEDFLN 453

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GGI  GIDR+ MLL  +  +R+V LFP  ++
Sbjct: 454 ALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFPTMKS 493


>gi|182626013|ref|ZP_02953776.1| lysyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|177908720|gb|EDT71231.1| lysyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 647

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 73/357 (20%), Positives = 148/357 (41%), Gaps = 25/357 (7%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTHS  D+        G  V+++G +   R  G ++F D+ D  G  Q+    D+   E 
Sbjct: 44  RTHSSADVKDNFEELEGKEVKVAGRLMSKRGQGKVVFADLADLPGKIQLFIKIDNVGEEA 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  ++  +    G  ++ + E     +  G++ +     E++  + + PLP        
Sbjct: 104 LKEFKTFDL----GDWVAATGEVFKTKM--GEVSVKVTSFELICKSLK-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
             +R++ R +D+  +   K+  +KR++I+ ++R  +    F+E  TPIL+  +    AR 
Sbjct: 157 PDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAGGAAARP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+ +GF++ +++   FR+E   S R   EF  +++
Sbjct: 217 FITHHNALDIDMY-LRIATELYLKRLIVAGFEKVYEMGKNFRNEGV-SVRHNPEFTAIEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D++  MEN++  V E+ +    V+     I +    RR           I M
Sbjct: 275 YEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWRR-----------ITM 323

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
            +  + F   +F             +   +            + +N      G+  L
Sbjct: 324 VDAVKEFAGIDFNEIKSDEEAQAIAKEKNLEFPKPLDKVTKGEVLNMLFEEYGEDKL 380



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 77/215 (35%), Gaps = 12/215 (5%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AY+  +++ S  V   G             +   +    G     I  D  +  + A +
Sbjct: 292 IAYVCEKVNGSTKVTYEGTEIDFTPPWRRITMVDAVKEFAGIDFNEIKSD-EEAQAIAKE 350

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
                 + L  +         +++  F E+ E+  K+         P       K     
Sbjct: 351 KNLEFPKPLDKVTKGE-----VLNMLFEEYGED--KLIQPTFLIDYPVEISPLTKKKRGN 403

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
            +   +++    G E+ +     +   V  + F      +E  ++           A + 
Sbjct: 404 EMFTERFEGFVYGREVCNAYSELNDPIVQRERFEQQAREREYGDDEAYMLDEEFMSALET 463

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           GMPP GG+  GIDR++M L  + ++R+V LFP  +
Sbjct: 464 GMPPTGGLGIGIDRMIMFLTDSSSIRDVILFPTMK 498


>gi|168206860|ref|ZP_02632865.1| lysyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168211213|ref|ZP_02636838.1| lysyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170661760|gb|EDT14443.1| lysyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170710776|gb|EDT22958.1| lysyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 647

 Score =  221 bits (563), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 73/357 (20%), Positives = 148/357 (41%), Gaps = 25/357 (7%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTHS  D+        G  V+++G +   R  G ++F D+ D  G  Q+    D+   E 
Sbjct: 44  RTHSSADVKDNFEELEGKEVKVAGRLMSKRGQGKVVFADLADLPGKIQLFIKIDNVGEEA 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  ++  +    G  ++ + E     +  G++ +     E++  + + PLP        
Sbjct: 104 LKEFKTFDL----GDWVAATGEVFKTKM--GEVSVKVTSFELICKSLK-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
             +R++ R +D+  +   K+  +KR++I+ ++R  +    F+E  TPIL+  +    AR 
Sbjct: 157 PDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAGGAAARP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+ +GF++ +++   FR+E   S R   EF  +++
Sbjct: 217 FITHHNALDIDMY-LRIATELYLKRLIVAGFEKVYEMGKNFRNEGV-SVRHNPEFTAIEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D++  MEN++  V E+ +    V+     I +    RR           I M
Sbjct: 275 YEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWRR-----------ITM 323

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
            +  + F   +F             +   +            + +N      G+  L
Sbjct: 324 VDAVKEFAGIDFNEIKSDEEAQAIAKEKNLEFPKPLDKVTKGEVLNMLFEEYGEDKL 380



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 77/215 (35%), Gaps = 12/215 (5%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AY+  +++ S  V   G             +   +    G     I  D  +  + A +
Sbjct: 292 IAYVCEKVNGSTKVTYEGTEIDFTPPWRRITMVDAVKEFAGIDFNEIKSD-EEAQAIAKE 350

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
                 + L  +         +++  F E+ E+  K+         P       K     
Sbjct: 351 KNLEFPKPLDKVTKGE-----VLNMLFEEYGED--KLIQPTFLIDYPVEISPLTKKKRGN 403

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
            +   +++    G E+ +     +   V  + F      +E  ++           A + 
Sbjct: 404 EMFTERFEGFVYGREVCNAYSELNDPIVQRERFEQQAREREYGDDEAYMLDEEFMSALET 463

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           GMPP GG+  GIDR++M L  + ++R+V LFP  +
Sbjct: 464 GMPPTGGLGIGIDRMIMFLTDSSSIRDVILFPTMK 498


>gi|325662822|ref|ZP_08151391.1| hypothetical protein HMPREF0490_02131 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325470874|gb|EGC74103.1| hypothetical protein HMPREF0490_02131 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 649

 Score =  221 bits (562), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 64/316 (20%), Positives = 138/316 (43%), Gaps = 22/316 (6%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   D+        G  V ++G +   R  G   F +++D  G  Q     D+   E  
Sbjct: 42  THHSMDIKDHFEEMEGKDVAIAGRIMSKRVMGKASFCNVQDLQGNIQSYVARDNIGEEAY 101

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K+ +   +    G ++    +     +  G+I + AQ++ +LS + ++ LP         
Sbjct: 102 KAFKKMDI----GDIVGIKGDVFRTKM--GEISIHAQEVTLLSKSLQI-LPEKFHGLTNT 154

Query: 123 SIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +  +    +KR++I++++R  +  + F+E  TPIL +++   A    
Sbjct: 155 DLRYRQRYVDLIMNPDVKDTFIKRSKILSAIRKYLDGQGFMEVETPILVSNAGGAAARPF 214

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     + L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 215 ETHFNALNEDFKLRISLELYLKRLIVGGMERVYEIGRVFRNEGLDTRHNP-EFTLMELYQ 273

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY-GTDKP 291
           ++ + + +++  EN+ R V +E      ++           F RI   DA+++Y G D  
Sbjct: 274 AYTDYNGMMDLTENLYRFVAQEVLGTTKITYGGVEMDLGKPFERITMVDAVKKYTGIDWN 333

Query: 292 DLRNPIIMHNVTEHFV 307
           ++        + +   
Sbjct: 334 EVTTLKEARRLAKEHK 349



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 56/160 (35%), Gaps = 30/160 (18%)

Query: 417 RNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           R+     L +     +  +  +  ++MD P               +P T  +        
Sbjct: 355 RHKKGDILSLFFEAFVEEHLIQPTFVMDHP------------IEISPLTKKKPENPEY-- 400

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYR 527
                    +++   NG+E+A+     +        F          +            
Sbjct: 401 -------TERFEFFMNGWEMANAYSELNDPIDQRARFKAQEELLAQGDEEANTTDEDFLN 453

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GGI  GIDR+ MLL  +  +R+V LFP  ++
Sbjct: 454 ALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFPTMKS 493


>gi|150400467|ref|YP_001324233.1| aspartyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|166225356|sp|A6USZ9|SYD_META3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150013170|gb|ABR55621.1| aspartyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 438

 Score =  221 bits (562), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 94/320 (29%), Positives = 144/320 (45%), Gaps = 25/320 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           RTH   ++     G  + + GW H +R  G ++F+ +RD  G  Q+VA       E    
Sbjct: 9   RTHYSSEVNSEMDGQEIIIMGWNHSIRKLGKLVFIILRDREGTIQIVAPKQKVSEETFAT 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
           AKS+  E V+ I G V++      N     G  E+   +I+IL+ A+   PL    +   
Sbjct: 69  AKSLGKEDVMAIKGKVVA------NEKAPAG-FEVIPIEIKILNKADTPLPLDPSEKVSA 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RFLDLRR  +      R+ ++ S+R       FI+  TP L AS+ EG  + 
Sbjct: 122 DIDTRLDKRFLDLRRPKIQSLFKLRSEVLKSIRNTFHDNGFIDVDTPKLVASATEGGTEL 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S  ++ +F  L Q+PQ YKQ++MA+GFDR F+I P FR E+  + R   E   +D E
Sbjct: 182 FPISYFDKEAF--LGQSPQLYKQMMMAAGFDRVFEIGPIFRAEEHNTRRHLNEAISIDCE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT------------VSNNFLRICYDDAIRRYGT 288
           MSF ++ D +  +E V+   F +  N N                 F RI Y +A+     
Sbjct: 240 MSFADEKDAMEILEKVINNAFTDIYNNNQKELQTLGIDLKVQETPFPRIEYTEAVDMVNA 299

Query: 289 DKPDLRNPIIMHNVTEHFVH 308
              ++          E  + 
Sbjct: 300 KGVEMEWGEDFSRPAEAALG 319



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 24/138 (17%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
           F +I D+P                PF                      +DL+    EI+S
Sbjct: 325 FYFITDWP------------TEIRPFYTLPNEDNPKLC--------KAFDLMYKDLEISS 364

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  RNH  +++++    +G++       FG    AF+ GMPPH G   GI+R++M++   
Sbjct: 365 GAQRNHKYDLLVEGIKRMGLNP----EGFGTYLEAFKYGMPPHSGWGVGIERLMMIMACQ 420

Query: 554 KNVREVSLFPMSQNFCDL 571
           +N+RE  LFP  +     
Sbjct: 421 QNIRECVLFPRDRQRLTP 438


>gi|57640427|ref|YP_182905.1| aspartyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|62296800|sp|Q52428|SYD_PYRKO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|302148834|pdb|3NEL|A Chain A, Aspartyl-Trna Synthetase Complexed With Aspartic Acid
 gi|302148835|pdb|3NEL|B Chain B, Aspartyl-Trna Synthetase Complexed With Aspartic Acid
 gi|302148836|pdb|3NEM|A Chain A, Aspartyl-Trna Synthetase Complexed With Aspartyl Adenylate
 gi|302148837|pdb|3NEM|B Chain B, Aspartyl-Trna Synthetase Complexed With Aspartyl Adenylate
 gi|302148838|pdb|3NEN|A Chain A, Unliganded Aspartyl-Trna Synthetase From Thermococcus
           Kodakarensis
 gi|302148839|pdb|3NEN|B Chain B, Unliganded Aspartyl-Trna Synthetase From Thermococcus
           Kodakarensis
 gi|57158751|dbj|BAD84681.1| aspartyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 438

 Score =  221 bits (562), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 102/414 (24%), Positives = 168/414 (40%), Gaps = 39/414 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACF 59
            YRTH   ++     G  V+++GWV  V+  GGI FL IRD  GI Q+ A     D   F
Sbjct: 1   MYRTHYSSEITEELNGQKVKVAGWVWEVKDLGGIKFLWIRDRDGIVQITAPKKKVDPELF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFGER 118
           ++   +RSE V+ ++G+V                 E+  +KI +L+ AE        G+ 
Sbjct: 61  KLIPKLRSEDVVAVEGVVNFTPK-------AKLGFEILPEKIVVLNRAETPLPLDPTGKV 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +     R   RF+DLRR  +      R+ +  ++R       FIE  TP + A++ EG  
Sbjct: 114 KAELDTRLDNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATEGGT 173

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +        + +F A  Q+PQ YKQ++MASG DR ++IAP FR E+  + R   E + +D
Sbjct: 174 ELFPMKYFEEDAFLA--QSPQLYKQIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSID 231

Query: 239 MEMSFV-EQDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAIRR 285
            EM+F+ +++++++ +E ++          N                 F R+ YD A+  
Sbjct: 232 SEMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDILNFELEEPKLPFPRVSYDKALEI 291

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
            G    ++     +    E  +              P Y ++  P++         D   
Sbjct: 292 LGDLGKEIPWGEDIDTEGERLLGKYMMENENA----PLYFLYQYPSEAKPFYIMKYDNKP 347

Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPV------AKHLNIVNTEAIRVRLDM 393
           E  R      L Y    +   G       +       K LN  + E        
Sbjct: 348 EICR---AFDLEYRGVEISSGGQREHRHDILVEQIKEKGLNPESFEFYLKAFRY 398



 Score =  102 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 4/103 (3%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +   D        +DL   G EI+SGG R H  +++++     G++       F    +A
Sbjct: 340 IMKYDNKPEICRAFDLEYRGVEISSGGQREHRHDILVEQIKEKGLNP----ESFEFYLKA 395

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           F+ GMPPHGG   G +R++  +L   N+REV LFP  +     
Sbjct: 396 FRYGMPPHGGFGLGAERLIKQMLDLPNIREVILFPRDRRRLTP 438


>gi|45359179|ref|NP_988736.1| aspartyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|62287566|sp|Q6LWU0|SYD_METMP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|45048054|emb|CAF31172.1| Aspartyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 438

 Score =  221 bits (562), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 103/359 (28%), Positives = 153/359 (42%), Gaps = 26/359 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH   D+     G  V L GWVH +R  G + F+ +RD  G  Q V      D   FEI
Sbjct: 9   RTHYSKDVIPEMDGQEVTLMGWVHSIRALGKLAFVILRDRAGTIQAVVPKQKVDEETFEI 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           AK +  E ++ I G V++      N     G  E+   +I +L+ A+  LPL    +   
Sbjct: 69  AKKLGKEDIVAIKGKVVA------NEKAPKG-FEVIPIEIRVLNKADAPLPLDPSEKVSA 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RFLD+RR  +      R+ ++ S+R     E FIE +TP L AS+ EG  + 
Sbjct: 122 EIDTRLDKRFLDIRRPKIQAIFKIRSEMLKSIRKTFADEGFIEVNTPKLVASATEGGTEL 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S   + +F  L Q+PQ YKQ++MA GFD+ F+IA  FR E+  + R   E   +D E
Sbjct: 182 FPISYFEKEAF--LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDSE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEF------------SNGNTVSNNFLRICYDDAIRRYGT 288
           MSFV + D +  +E V+   + +              N       F ++ Y +AI     
Sbjct: 240 MSFVNEKDAMAMLEKVVYNCYSDIEYNRPNEIELLELNWEIPEKTFDKVTYTEAIDIAIA 299

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE-VWAIPAKGGGGNRAFCDRMNE 346
              ++     +    E  V  E      I          + +P K         D M +
Sbjct: 300 KGVEIEWGEDLSRAAERAVGDEMGGLYFITEWPTQTRPFYTLPHKHDNKVCKAFDLMYK 358



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 64/175 (36%), Gaps = 31/175 (17%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D       +       +  A   +  E+G          +I ++P               
Sbjct: 295 DIAIAKGVEIEWGEDLSRAAERAVGDEMG-------GLYFITEWP------------TQT 335

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
            PF            +   +     +DL+    EI+SG  R H  ++++Q  SN+G++  
Sbjct: 336 RPFYT--------LPHKHDNKVCKAFDLMYKELEISSGAQRVHKYDLLVQNISNMGLNP- 386

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
              + F     AF+ GMPPH G   G DR  M+L    N+RE  LFP  +     
Sbjct: 387 ---DSFETYLEAFKYGMPPHAGWGLGADRFAMVLTAQDNIRECVLFPRDRQRLTP 438


>gi|315122583|ref|YP_004063072.1| lysyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495985|gb|ADR52584.1| lysyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 496

 Score =  221 bits (562), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 110/578 (19%), Positives = 191/578 (33%), Gaps = 139/578 (24%)

Query: 2   HRYRTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +R  +  +L                V ++G V+  R  G  +F+D+ D  G  Q+  +
Sbjct: 36  HFHRDLTNAELSEKYSHLQDDEKSEDIVTIAGRVYSSRNSG--MFMDLHDASGKIQIFTH 93

Query: 54  P---DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D     +   +    ++ + G V              G++ +++Q I +L+ A   
Sbjct: 94  KNTTDQDSQNLLPMIDLGDIIGVTGQVRRTKR---------GELTVNSQTITMLTKAL-N 143

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
            +P           R++ R+LD+  +   K    +R+RII+ +R  M    F+E  TPIL
Sbjct: 144 SIPETYYGLSDIETRYRKRYLDIISNPDSKLRFQQRSRIISQIRHFMENNGFMEVETPIL 203

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSD 228
                    D  +       +   L  AP+ Y + ++ SG  D+ F++   FR+E   S 
Sbjct: 204 QPIYGGATADPFITHHNILKADMYLRIAPELYLKRVLVSGLTDQVFELNRNFRNEGISSR 263

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  ++   ++ +  D    M  ++  +F                 ++  I  YG 
Sbjct: 264 HNP-EFTMIEAYWAYTDYRD----MMKLVEDLF-----------------HNLVISLYGK 301

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
                         T+     +   F K  +                     C  M +  
Sbjct: 302 --------------TDIPFGKKVISFKKPFA---------------------CKSMPQLV 326

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
           +     G+ ++  + D+   VA                I V  D   G+    +  +   
Sbjct: 327 KE--ATGIDFMLLKSDQEARVAAQS-----------IGIEVEEDAIWGEVMMNLFEEK-- 371

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                             I  N      I DFP        K I    +PF     G   
Sbjct: 372 ------------------IEKNILNPMHITDFP--------KDI----SPFAKEVVG--- 398

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF---GGL 525
                  S    +++  CNG+EI +     +                     +       
Sbjct: 399 ------ESRLVERFETYCNGWEICNAFSELNDPIEQRIRMEKQLKQSHKRGEKIILDEDF 452

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A   GMPP  G+  GIDR++MLL  A ++R+V LFP
Sbjct: 453 LDAMTYGMPPASGLGLGIDRLIMLLTNAPSIRDVILFP 490


>gi|326562874|gb|EGE13161.1| lysyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 507

 Score =  221 bits (562), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 99/578 (17%), Positives = 187/578 (32%), Gaps = 138/578 (23%)

Query: 7   HSCGDLGVSDVGS-----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           + CGDL     G            +V+++G V   R      F+ I+D     Q+  +  
Sbjct: 50  NYCGDLQAQFDGVDKATIESGDKVYVKVAGRVILNRGS----FIVIQDMTDRIQLYVDRK 105

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E  + ++S  +  I       +A         G + +  +  E+L+ +   PLP  
Sbjct: 106 GLPSETLELIKSLDLGDI------VAASGYIGRSGKGDLYVHLEAFELLTKSLR-PLPDK 158

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   ++++ R+LDL  +   +N    R +++  +R  +  E F+E  TP++     
Sbjct: 159 FHGLTDTEVKYRKRYLDLMVNEETRNTFAIRAKVVAGIRAFLTQERFMEVETPMMHVIPG 218

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   +   P E
Sbjct: 219 GASARPFVTHHNALDMQLY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGVSTRHNP-E 276

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  ++   +                     +++   +     R+    A+   G+     
Sbjct: 277 FTMIEFYQA---------------------YADYKDLMALTERMLETLAMDILGS----- 310

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
                    T+     E   F                 KG        D + E+      
Sbjct: 311 ---------TDVSYQGEVFSF-----------------KGPFKKITMFDAILEYNSDFSA 344

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                         ++     +AK +     + ++    +    +  F      K     
Sbjct: 345 D-------------DINDREFLAKFVKDELKQEVKPSFGLGKLQTIVFEETVETKLRQ-- 389

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                                 +I ++P      E   +                 + ND
Sbjct: 390 --------------------PTFITEYP-----AETSPLA----------------RRND 408

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAF 529
                  ++++   G E+A+G    +      + F      K+  ++           A 
Sbjct: 409 TNPHVTDRFEMFIGGRELANGFSELNDPIDQAERFRAQVAEKDAGDDEAMHYDADFIEAL 468

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + G+PP  G   GIDR+VML   A ++R+V LFP  ++
Sbjct: 469 EYGLPPTAGEGIGIDRLVMLFADAASIRDVILFPHMRH 506


>gi|189459667|ref|ZP_03008452.1| hypothetical protein BACCOP_00295 [Bacteroides coprocola DSM 17136]
 gi|189433626|gb|EDV02611.1| hypothetical protein BACCOP_00295 [Bacteroides coprocola DSM 17136]
          Length = 580

 Score =  221 bits (562), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 106/583 (18%), Positives = 199/583 (34%), Gaps = 130/583 (22%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F++++D  G  Q+    D  C +  K + +     +  L  
Sbjct: 58  RKVSVAGRIMSRRVMGKASFVELQDSKGRIQIYITRDDICPDENKDLYNVVFKRLLDLGD 117

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFKYRFLD 132
               E        G+I + AQK+ +LS +      V  +      +     +R++ R++D
Sbjct: 118 FIGIEGFVFRTQMGEISIHAQKLTVLSKSIRPLPIVKYKDGVAYDKFDDPELRYRQRYVD 177

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +  +    +KR ++ NSMR    ++ +IE  TPIL + +    AR F+         
Sbjct: 178 LVVNDGVKDIFLKRNKVYNSMREYFNSKGYIEVETPILQSIAGGAAARPFITHHNALDIP 237

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + Y + L+  GF+  ++I   FR+E                          +
Sbjct: 238 LY-MRIASELYLKRLIVGGFEGVYEIGKNFRNEG-------------------------M 271

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           +   N                  F  +    A + Y        N +I     +    +E
Sbjct: 272 DRTHN----------------PEFTCMEIYVAYKDYNWMMKFTEN-MIEKICMDVNGTTE 314

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
            +V   I++    ++   +            D + E+                D +G   
Sbjct: 315 VKVGDNIINFKAPFKRVTM-----------LDSIKEFTGY-------------DLTG--- 347

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
                   +N      +  +L+M+  D+                   + I  E      N
Sbjct: 348 --------MNEEQIREVCQKLNMEIDDTMGK------------GKLIDEIFGEFC--EGN 385

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
             +  +I D+P  E +   K+                     DL      +++L+ NG E
Sbjct: 386 YIQPTFITDYPI-EMSPLTKR----------------HRNNPDL----TERFELMVNGKE 424

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRI 546
           + +     +     L+ F       E  ++          RA + GMPP  G+  G+DR+
Sbjct: 425 LCNAYSELNDPIDQLERFEEQMRLSEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRL 484

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
           VML+ G   ++EV  FP  +    +   +P+        ELG+
Sbjct: 485 VMLMTGQSTIQEVLFFPQMRPEKVIPKDAPAK-----FMELGI 522


>gi|119470491|ref|ZP_01613194.1| lysyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119446192|gb|EAW27469.1| lysyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 511

 Score =  221 bits (562), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 103/580 (17%), Positives = 197/580 (33%), Gaps = 119/580 (20%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H   DL                  V ++G +   R      F+ I+D  G  QV A+ 
Sbjct: 37  REHYTADLQAEFGDKTKEELIELQHVVSIAGRILAKRGP----FMSIQDMKGRVQVYASK 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     + K +++++     G ++        +    G + +   + E+L+ +   PLP 
Sbjct: 93  D-----VQKDLKAKYGQLDIGDIIGVKGPLNKSG--KGDLYVDMAEYELLTKSLR-PLPE 144

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  +++ R++DL  +   +   + R++++  +R  +   +F+E  TP+L    
Sbjct: 145 KFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVEGIRRFLADRDFMEVETPMLQVIP 204

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   +   P 
Sbjct: 205 GGASARPFVTHHNALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSTRHNP- 262

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  ++   ++ +  D++N  E++LR V         V N       D+      + + D
Sbjct: 263 EFTMIEFYQAYADYIDLMNITEDMLRTVATNVLGSPIVVNT----TKDENGEVIDSVEYD 318

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P    ++ +  +      F   +  +P                   + +  +A+   
Sbjct: 319 FGKPFERLSMADAILKYNPE-FDAAVFNDPEN---------------HFEELKAYAKQ-- 360

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
                 +  ++ E+        + +         +             FI G P +    
Sbjct: 361 ------VHVKIPENCVWGPGKFLCEIFEETAEHMLIQPT---------FITGYPWEVSPL 405

Query: 413 AADARNHIAQELGIINCNCFEFCWIMD-FPFYEWNEE-EKKIDFAHNPFTMPQGGMESLK 470
              AR +        + N F    + D F F+    E        ++     +     ++
Sbjct: 406 ---ARRN--------DDNAF----VTDRFEFFVGGRELANGFSELNDAQDQAERFTRQVE 450

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D    +A  YD                                           RA +
Sbjct: 451 EKDAGDDEAMHYD---------------------------------------EDYIRALE 471

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+PP  G   GIDR+VML   +  +++V LFP  +   D
Sbjct: 472 YGLPPTAGEGIGIDRLVMLFTDSSTIKDVILFPHMRPQAD 511


>gi|315230515|ref|YP_004070951.1| aspartyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183543|gb|ADT83728.1| aspartyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 438

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 98/364 (26%), Positives = 159/364 (43%), Gaps = 37/364 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YRTH    +     G  V+++GWV+ ++  GGI FL IRD  GI QV A       EI 
Sbjct: 1   MYRTHYSSQITEELNGQRVKVAGWVYEIKDLGGIKFLWIRDREGIVQVTAPKKKVSEEIF 60

Query: 63  K---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFGER 118
           K    + SE V+ ++G+V                 E+  +K+E+LS AE        G+ 
Sbjct: 61  KLIPKLNSEDVVAVEGMVNFTPK-------AKLGFEIIPEKLEVLSKAETPLPLDPTGKV 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +     R   RF+DLR+  +      R+ +  ++R     E FIE  TP + A++ EG  
Sbjct: 114 KAELDTRLDNRFIDLRKPEVMAIFKIRSNVFKAVREFFYNEGFIEIHTPKIIATATEGGT 173

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +        + +F A  Q+PQ YKQ++MASG DR F+IAP FR E+  + R   E + +D
Sbjct: 174 ELFPMKYFEKDAFLA--QSPQLYKQIMMASGLDRVFEIAPIFRAEEHNTTRHLNEAWSID 231

Query: 239 MEMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAIR- 284
            E++F+E +D ++  +E ++          N                 F RI Y +A+  
Sbjct: 232 AEIAFIEDEDEVMQVLERLVAYTINYVREHNEKELKILNFELEEPKLPFRRITYTEALEI 291

Query: 285 --------RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
                    +G D       ++   + E++    + ++       P Y +          
Sbjct: 292 LKDLGKNIPWGEDIDTEGEKLLGQYIKENYDEDLYFIYQYPSEAKPFYIMKYDDNP--KI 349

Query: 337 NRAF 340
           +RAF
Sbjct: 350 SRAF 353



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 4/103 (3%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +   D     +  +DL   G EI SGG R H  E++ Q  +  G++       F    +A
Sbjct: 340 IMKYDDNPKISRAFDLEYRGVEITSGGQREHRYEILKQQIAEKGLNV----ESFEFYLKA 395

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           F+ GMPPHGG   G +R++  +L   N+REV LFP  +     
Sbjct: 396 FRYGMPPHGGFGLGAERLIKQMLNLGNIREVILFPRDRKRLTP 438


>gi|296390679|ref|ZP_06880154.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 203

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 93/201 (46%), Positives = 123/201 (61%), Gaps = 1/201 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  V L GWVHR R HGG+IFLD+RD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLDGQEVTLCGWVHRRRDHGGVIFLDVRDREGLAQVVFDPDRAETFAKAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ I G V  R     N N+ +G IE+   ++E+L+ AE  P P+    +  E 
Sbjct: 63  RVRSEFVVKITGKVRLRPEGARNPNMASGSIEVLGYELEVLNQAETPPFPLDEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  +   +  R RI +S+R  +    F++  TPIL   +PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAAKLKLRARITSSIRRYLDDNGFLDVETPILGRPTPEGARDYLVP 182

Query: 184 SRVNQGSFYALPQAPQQYKQL 204
           SR   G F+ALPQ+PQ +KQL
Sbjct: 183 SRTYPGHFFALPQSPQLFKQL 203


>gi|224024193|ref|ZP_03642559.1| hypothetical protein BACCOPRO_00916 [Bacteroides coprophilus DSM
           18228]
 gi|224017415|gb|EEF75427.1| hypothetical protein BACCOPRO_00916 [Bacteroides coprophilus DSM
           18228]
          Length = 575

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 104/584 (17%), Positives = 197/584 (33%), Gaps = 130/584 (22%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F++++D  G  Q+    D  C +  K + +     +  L  
Sbjct: 54  RKVSVAGRIMSRRVMGKASFIELQDSKGRIQIYITRDDICPDENKDLYNVVFKRLLDLGD 113

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFLD 132
               E        G+I + AQK+ +LS +      V  +            +R++ R++D
Sbjct: 114 FIGIEGFVFRTQMGEISIHAQKLTVLSKSIRPLPIVKYKDGVAYDKFEDPELRYRQRYVD 173

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +  +    +KR ++ NSMR    ++ +IE  TPIL + +    AR F+         
Sbjct: 174 LVVNDGVKDIFLKRNKVYNSMREYFNSKGYIEVETPILQSIAGGAAARPFITHHNALDIP 233

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + Y + L+  GF+  ++I   FR+E                          +
Sbjct: 234 LY-MRIASELYLKRLIVGGFEGVYEIGKNFRNEG-------------------------M 267

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           +   N                  F  +    A + Y        N +I     +    +E
Sbjct: 268 DRTHN----------------PEFTCMEIYVAYKDYNWMMKFTEN-MIEKICMDVNGTTE 310

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
            +V   I++    ++   +            D + E+                D +G   
Sbjct: 311 VKVGDNIINFKAPFKRVTM-----------LDSIKEFTGY-------------DLTG--- 343

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
                   +N      +  +L+M+  D+                   + I  E      N
Sbjct: 344 --------MNEEQIREVCQKLNMEIDDTMGK------------GKLIDEIFGEFC--EGN 381

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
             +  +I D+P  E +   K+              +              +++L+ NG E
Sbjct: 382 YIQPTFITDYPI-EMSPLTKR--------HRNNPEL------------TERFELMVNGKE 420

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRI 546
           + +     +     L+ F       E  ++          RA + GMPP  G+  G+DR+
Sbjct: 421 LCNAYSELNDPIDQLERFEEQMRLSEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRL 480

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLR 590
           VML+ G   ++EV  FP  +    +   +P+        ELG+ 
Sbjct: 481 VMLMTGQSTIQEVLFFPQMRPEKVIPKDAPAK-----FMELGIS 519


>gi|315652679|ref|ZP_07905654.1| lysine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485057|gb|EFU75464.1| lysine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 496

 Score =  220 bits (561), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 66/339 (19%), Positives = 124/339 (36%), Gaps = 23/339 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
               G  V ++G +   R  G   F  ++D  G  Q     DS   +  K+ +   +  I
Sbjct: 54  EKLDGKSVNIAGRLMSKRVMGKASFCHVQDLTGKIQAYVARDSVGEDEYKAFKKLDIGDI 113

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+              TG+I + A  + +LS + + PLP           R++ R++DL
Sbjct: 114 VGV------TGTVFKTQTGEISIHATDVVLLSKSLK-PLPEKFHGLTDTDTRYRQRYVDL 166

Query: 134 RRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +  +    VKR+RII  +R  +  + FIE  TP+L +++   A               
Sbjct: 167 IMNEDVKDTFVKRSRIITEIRKFLDGQGFIEVETPMLVSNAGGAAARPFNTHYNALDEDV 226

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   +++ 
Sbjct: 227 KLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYHGMMDL 285

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            EN+ R + +      T+               Y     DL  P     + E        
Sbjct: 286 TENMFRYLAQTVCGSTTIP--------------YAEAMIDLGKPFERTTMVEAIKKYSGV 331

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
            F K+ +      +               D +N +    
Sbjct: 332 DFDKVETTKEAKALAKEKKIEFEERHTRGDIINLFFEEF 370



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EEK I      F M     +  L        +   +++L   G E+A+     +
Sbjct: 366 FFEEFVEEKLIQPT---FVMDHPIEVSPLTKKKPGDPRYVERFELFIYGREMANAYSELN 422

Query: 500 MSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F     +    +            A + GMPP GGI  GIDR+VMLL  +  
Sbjct: 423 DPIDQRERFKAQEAAFAAGDEEANHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTNSPA 482

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 483 IRDVLLFP 490


>gi|73669176|ref|YP_305191.1| lysyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|72396338|gb|AAZ70611.1| lysyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 515

 Score =  220 bits (561), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 103/559 (18%), Positives = 187/559 (33%), Gaps = 122/559 (21%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             + G  VR +G ++ +R  G +IF D+ D  G  QV     +   E  K+ ++   L  
Sbjct: 72  EKNEGLTVRTAGRLYNIRRLGKMIFADLGDQGGRIQVTLRKGNLPDEDFKTFKT---LVD 128

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++             G+  +S  +  +LS +    LP           R++ R+LDL
Sbjct: 129 SGDIVGVQGTLFRTK--RGENSISVSEFSLLSKSL-CALPEKFHGLKDVETRYRKRYLDL 185

Query: 134 RRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   +   V R+++I+ +R  +    F+E  TPIL                   G   
Sbjct: 186 IVNADKREIFVMRSKLISEIRRYLSDREFLEFETPILQNVYGGANARPFTTFHNCLGQKL 245

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  G+++ F+I+  FR+ED             + E + +E  +    
Sbjct: 246 FLRIAPELYLKRLVVGGYEKVFEISKNFRNEDID--------TTHNPEFTMIEVYE---- 293

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
                                        A R Y     DL   +I   V +     E +
Sbjct: 294 -----------------------------AYRDYNDMM-DLTEGLISELVFKLTGSYEVK 323

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
           +    L+++  ++  ++            D + E+A                  G     
Sbjct: 324 IGENTLNLHTPWKRISME-----------DALKEYA------------------GLDVFA 354

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
             +         + I +   ++D             +  F A          G++     
Sbjct: 355 HSL------EELKQIAIENRIED-------YEKAKTYGEFLALLFE------GLVEDKLI 395

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              +I DFP      E   +   H                        +++L  NG+E+A
Sbjct: 396 NPTFIYDFPV-----ENSPLAKNHR----------------SKEGFVERFELFLNGWELA 434

Query: 493 SGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G    +      + F      ++      +        A   GMPP GG+  GIDR+ M
Sbjct: 435 NGYSELNDPIEQQKRFEEQDKKRKLGDLEAQTIDYDFVNALGYGMPPTGGMGLGIDRLTM 494

Query: 549 LLLGAKNVREVSLFPMSQN 567
           +L G  +++EV LFP  + 
Sbjct: 495 ILAGLDSIKEVILFPQMKR 513


>gi|315127589|ref|YP_004069592.1| lysyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315016103|gb|ADT69441.1| lysyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 511

 Score =  220 bits (561), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 105/580 (18%), Positives = 201/580 (34%), Gaps = 119/580 (20%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H   DL             ++   V ++G +   R      F+ I+D  G  QV A+ 
Sbjct: 37  REHYTADLQAEFGDKSKEELIELQHVVSIAGRILAKRGP----FMSIQDMKGRVQVYASK 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     + K +++++     G ++        +    G + +   + E+L+ +   PLP 
Sbjct: 93  D-----VQKDLKAKYGQLDIGDIIGVKGPLNKSG--KGDLYVDMAEYELLTKSLR-PLPE 144

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  +++ R++DL  +   +   + R++++  +R  +   +F+E  TP+L    
Sbjct: 145 KFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVEGIRRFLADRDFMEVETPMLQVIP 204

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   +   P 
Sbjct: 205 GGASARPFVTHHNALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSTRHNP- 262

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  ++   ++ +  D++N  E++LR V         V N       D+      + + D
Sbjct: 263 EFTMIEFYQAYADYIDLMNITEDMLRTVATNVLGSPIVVNT----TKDENGDVVDSVEYD 318

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P    ++++            IL  NP ++                + +  +A+   
Sbjct: 319 FGQPFTRLSMSDA-----------ILKYNPEFDAAVFNDPEN-----HFEELKAYAKQ-- 360

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
                 +  ++ E+        + +         +             FI G P +    
Sbjct: 361 ------VHVKIPENCVWGPGKFLCEIFEETAEHMLIQPT---------FITGYPWEVSPL 405

Query: 413 AADARNHIAQELGIINCNCFEFCWIMD-FPFYEWNEE-EKKIDFAHNPFTMPQGGMESLK 470
              AR +        + N F    + D F F+    E        ++     +     ++
Sbjct: 406 ---ARRN--------DENPF----VTDRFEFFVGGRELANGFSELNDAQDQAERFTRQVE 450

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             D    +A  YD                                           RA +
Sbjct: 451 EKDAGDDEAMHYD---------------------------------------EDYIRALE 471

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+PP  G   GIDR+VML   +  +++V LFP  +   D
Sbjct: 472 YGLPPTAGEGIGIDRLVMLFTDSSTIKDVILFPHMRPQAD 511


>gi|227486473|ref|ZP_03916789.1| possible lysine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235654|gb|EEI85669.1| possible lysine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 637

 Score =  220 bits (561), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 110/575 (19%), Positives = 195/575 (33%), Gaps = 136/575 (23%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--F 59
           +R  +    D         VR++G +   R HG + F+D++D  G  QVV   +     F
Sbjct: 37  NRISSKEIKDNFEKYEDQTVRVAGRILAKRGHGNMSFMDVQDDLGQIQVVNRKNVIGDDF 96

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  K      ++ ++G V              G+I +   K ++L+ A ++ LP      
Sbjct: 97  KYIKKYDIGDIIGVEGKV---------FKTNQGEISIEVAKSDLLTKALQM-LPEKWHGL 146

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
               +R++ R++DL  +   K +   R+RII+++R  +    F+E  TPIL   +    A
Sbjct: 147 KDPDLRYRQRYIDLIVNPEVKEVFVQRSRIISAIREFLDGRGFLEVETPILNTIAGGATA 206

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R F+          Y L  A + Y + L+  GFDR ++I   FR+E              
Sbjct: 207 RPFITHHNTLDIDMY-LRIANELYLKRLIVGGFDRVYEIGRMFRNEG------------- 252

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
                       ++   N                         +  + YG D  D     
Sbjct: 253 ------------MDATHN-------------------PEYTAMELYQAYG-DYED----- 275

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            M  +TE+ V    +       V        + A            M E  +     G+ 
Sbjct: 276 -MMEITENMVEHVAKKVKGTTLVEFDGHEIELKAPWKRIP------MIEAVKEY--SGVD 326

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +   + DE         +AK   +   E                               R
Sbjct: 327 FNEIKTDEEAK-----AIAKEKGVEVKET------------------------------R 351

Query: 418 NHIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
             I  E     +     +  +I D+P               +P    +    SL      
Sbjct: 352 GEIIAEFFDEFVEDKLIQPTFITDYP------------VEISPLAKRKNDDRSL------ 393

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQC 531
               ++++   +G EI +     + +E     F +    +E  ++           A + 
Sbjct: 394 ---TYRFEAFVSGAEIGNAFSELNDAEDQRARFEDQVRKREAGDDEAQMMDYDFVNALEV 450

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP GG+  GIDR++M+L G  ++R+V LFP  +
Sbjct: 451 GLPPTGGLGIGIDRLIMILTGQHSIRDVLLFPTMK 485


>gi|56459930|ref|YP_155211.1| lysyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81363138|sp|Q5QYV9|SYK_IDILO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|56178940|gb|AAV81662.1| Lysyl-tRNA synthetase class II [Idiomarina loihiensis L2TR]
          Length = 503

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 71/311 (22%), Positives = 130/311 (41%), Gaps = 20/311 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +++ G  V+++G +   R  G   F  I+D  G  Q+    D+       +   +W L  
Sbjct: 58  LAEKGIRVKVAGRMMTRRIMGKASFATIQDMSGKIQLYVARDNLPEGYYNTEFKKWDL-- 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++  S         TG++ +   ++ +L+ A   PLP        + +R++ R+LDL
Sbjct: 116 -GDILGASGTLFITG--TGELSVQVDEVRLLTKALR-PLPDKFHGLSDQEMRYRQRYLDL 171

Query: 134 RRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +   + R++II+ +R  +    F+E  TP++ A      AR F           
Sbjct: 172 ITNEESRSTFMARSKIIDYIRRFLSDRQFLEVETPMMQAIPGGAAARPFSTHHNALDMEL 231

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  L+   ++ +  D+++
Sbjct: 232 F-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNP-EFTMLEFYWAYADYHDLMD 289

Query: 252 TMENVLRGVFEEFSN---------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
             E +LRG  E                    F R+   +AI +Y  +   L     M+  
Sbjct: 290 LTEQMLRGAAESVLGSAQFTSQGVDYDFGKPFERMTVLEAIVKYMPEV-SLEQLNDMNTA 348

Query: 303 TEHFVHSEFRV 313
           TE        V
Sbjct: 349 TEIAEQVGVSV 359



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 8/158 (5%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLS 476
             IA+++G+     +    +     +E   E + I       T     +  L + +D   
Sbjct: 349 TEIAEQVGVSVKPSWGLGKV-QIEIFETVAEHRLIQPTF--ITAYPAEVSPLARRHDDNP 405

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCG 532
               +++    G E+A+G    + +E   + F      KE  ++           A + G
Sbjct: 406 FVTDRFEFFAGGRELANGFSELNDAEDQAERFREQVEQKEAGDDEAMFYDEDYVTALEHG 465

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP  G   GIDR+VMLL  + ++R+V LFP  +   D
Sbjct: 466 MPPTAGQGIGIDRLVMLLTDSASIRDVLLFPHMRPKAD 503


>gi|291534724|emb|CBL07836.1| Lysyl-tRNA synthetase (class II) [Roseburia intestinalis M50/1]
          Length = 645

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 64/288 (22%), Positives = 129/288 (44%), Gaps = 18/288 (6%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +  G  V ++G +   R  G   F +I+D  G  QV    D+   EI K  +   +  I 
Sbjct: 53  TMEGKPVSIAGRMMFKRVMGKASFCNIQDLKGRIQVYVARDNIGEEIYKDFKKSDIGDIW 112

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G+      +       TG+I + A+++ +LS + ++ LP          +R++ R++DL 
Sbjct: 113 GI------KGYAFRTKTGEISIHAEEMTLLSKSLQI-LPEKFHGLTDTDMRYRQRYIDLI 165

Query: 135 RDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +   K   +KR++I+  +R  +   +F+E  TP+L +++   A                
Sbjct: 166 MNQESKEVFIKRSKILKEIRNFLADRDFMEVETPMLVSNAGGAAARPFETHYNALNEDVK 225

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++   
Sbjct: 226 LRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMELT 284

Query: 254 ENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           E++ R + E+      +S N         F R+  +DAI++Y     D
Sbjct: 285 ESMFRYLAEKVCGSTKISYNGIEIDLGKPFTRMTMNDAIKKYTGIDFD 332



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K +D   +   +++L  N +E+ +     +      + F+    +    ++         
Sbjct: 393 KPSDPTKV--ERFELFINTWEMCNAYSELNDPVDQRERFAAQDANAAAGDDEAEHTDEDF 450

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++
Sbjct: 451 LNALEIGMPPTGGIGYGIDRLVMLLTDSAAIRDVLLFPTMKS 492


>gi|110803200|ref|YP_699721.1| lysyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|123047148|sp|Q0SQ86|SYK_CLOPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|110683701|gb|ABG87071.1| lysine--tRNA ligase [Clostridium perfringens SM101]
          Length = 501

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 74/365 (20%), Positives = 151/365 (41%), Gaps = 25/365 (6%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTHS  D+        G  V+++G +   R  G ++F D+ D  G  Q+    D+   E 
Sbjct: 44  RTHSSADVKDNFEELEGKEVKVAGRLMSKRGQGKVVFADLADLPGKIQLFIKIDNVGEEA 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  ++  +    G  ++ + E     +  G++ +     E++  + + PLP        
Sbjct: 104 LKEFKTFDL----GDWVAATGEVFKTKM--GEVSIKVTSFELICKSLK-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
             +R++ R +D+  +   K+  +KR++I+ ++R  +    F+E  TPIL+  +    AR 
Sbjct: 157 PDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAGGAAARP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+ +GF++ +++   FR+E   S R   EF  +++
Sbjct: 217 FITHHNALDIDMY-LRIATELYLKRLIVAGFEKVYEMGKNFRNEGV-SVRHNPEFTAIEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D++  MEN++  V E+ +    V+     I +    RR           I M
Sbjct: 275 YEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWRR-----------ITM 323

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +  + F   +F             +   +            + +N      G+  L   
Sbjct: 324 VDAVKEFAGIDFNEIKSDEEAQAIAKEKNLEFPKPLDKVTKGEVLNMLFEEYGEDKLIQP 383

Query: 360 FWRLD 364
            + +D
Sbjct: 384 TFLVD 388



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 77/215 (35%), Gaps = 12/215 (5%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AY+  +++ S  V   G             +   +    G     I  D  +  + A +
Sbjct: 292 IAYVCEKVNGSTKVTYEGTEIDFTPPWRRITMVDAVKEFAGIDFNEIKSD-EEAQAIAKE 350

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
                 + L  +         +++  F E+ E+  K+         P       K     
Sbjct: 351 KNLEFPKPLDKVTKGE-----VLNMLFEEYGED--KLIQPTFLVDYPVEISPLTKKKRGN 403

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
            +   +++    G E+ +     +   V  + F      +E  ++           A + 
Sbjct: 404 EMFTERFEGFVYGREVCNAYSELNDPIVQRERFEQQAREREYGDDEAYMLDEEFMSALET 463

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           GMPP GG+  GIDR++M L  + ++R+V LFP  +
Sbjct: 464 GMPPTGGLGIGIDRMIMFLTDSSSIRDVILFPTMK 498


>gi|85712972|ref|ZP_01044011.1| Lysyl-tRNA synthetase class II [Idiomarina baltica OS145]
 gi|85693210|gb|EAQ31169.1| Lysyl-tRNA synthetase class II [Idiomarina baltica OS145]
          Length = 503

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 66/292 (22%), Positives = 122/292 (41%), Gaps = 21/292 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK-SVRSEWVL 71
            +   G  V+++G +   R  G   F  I+D  G  Q+    D+          +   + 
Sbjct: 57  SLEQQGVRVKVAGRMMTRRIMGKASFATIQDMSGKIQLYVARDNLPEGFYNSEFKKWDLG 116

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G      A  +     TG++ +    + +L+ A   PLP        +  R++ R+L
Sbjct: 117 DIIG------ASGVLFKTGTGELSVLVDDVRLLTKALR-PLPDKFHGLADQETRYRQRYL 169

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQG 189
           DL  +   +N    R+R+I+ +R  +    F+E  TP++ T      AR F         
Sbjct: 170 DLITNEESRNTFLVRSRVIDYIRRYLNEHQFLEVETPMMQTIPGGAAARPFSTHHNALDM 229

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             + L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  L+    + +  D+
Sbjct: 230 ELF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNP-EFTMLEFYWGYADYFDL 287

Query: 250 LNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDKPD 292
           ++  E++LRG+ ++     T             F R+   +AI +Y  +  +
Sbjct: 288 MDMTEDMLRGIAQDVLGSTTFESGGVTYDFGQRFERMTVLEAIIKYMPEVTE 339



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 4/126 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E ++         P       + ND       +++    G E+A+G    + +E   Q F
Sbjct: 378 EHRLIQPTFITAYPAEVSPLARRNDENPFVTDRFEFFAGGRELANGFSELNDAEDQAQRF 437

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +   +KE  ++           A + GMPP  G   GIDR+VMLL  +  +R+V LFP 
Sbjct: 438 RDQVEAKEAGDDEAMFYDEDYVTALEHGMPPTAGEGIGIDRLVMLLTDSSTIRDVLLFPH 497

Query: 565 SQNFCD 570
            +   D
Sbjct: 498 MRPKAD 503


>gi|256821964|ref|YP_003145927.1| lysyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256795503|gb|ACV26159.1| lysyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 499

 Score =  220 bits (560), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 60/287 (20%), Positives = 122/287 (42%), Gaps = 20/287 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + ++G  V+++G +   R  G   F+ I+D  G  Q     D+   ++    ++  +  I
Sbjct: 57  LEELGKQVKVAGRIMLFRNMGKASFITIQDMSGRIQSYVRKDAVGDDVYDDFKTWDIGDI 116

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      E        G++ + A  I +L+ A   PLP        +  R++ R++DL
Sbjct: 117 VGI------EGTVFKTNKGELSVKASNIRLLTKALR-PLPDKWSGLSDQETRYRQRYVDL 169

Query: 134 RRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +   + R++++ ++R  + + +F+E  TP++        AR F           
Sbjct: 170 IVNEESRETFIIRSKVVKAIRDFLESRDFLEVETPMMHVIPGGASARPFETHHNALDMPL 229

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  G ++ ++I   FR+E   +   P EF  L+    + + +D+++
Sbjct: 230 Y-LRVAPELYLKRLVVGGLEKVYEINRNFRNEGLSTRHNP-EFTMLEFYWGYADYNDLMD 287

Query: 252 TMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTD 289
             E +LR   E                    F R+   +AI +Y  +
Sbjct: 288 LTEAMLRHTVETVLGKTVFESSGETYDFGKPFARMTVLEAITKYQPE 334



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 9/161 (5%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL- 469
           S    AR+ +A+ L I     +    +     +E   E K I       T     +  L 
Sbjct: 341 SDLDKARD-VAKRLKIKTEKSWGLGKV-QIEIFEEVAEHKLIQPTF--ITAYPAEVSPLA 396

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---- 525
           + ND       +++    G E+A+G    + +E   + F     +K+  ++         
Sbjct: 397 RRNDEDPFVTDRFEFFAGGRELANGFSELNDAEDQAERFKAQVEAKDAGDDEAMHYDADY 456

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            RA + G+PP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 457 IRALEYGLPPTAGEGIGIDRLVMLLTDSPSIRDVLLFPHMR 497


>gi|14590860|ref|NP_142932.1| aspartyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|6647821|sp|O58776|SYD_PYRHO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3257434|dbj|BAA30117.1| 438aa long hypothetical aspartyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 438

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 97/388 (25%), Positives = 164/388 (42%), Gaps = 33/388 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RTH   ++     G  V+++GWV  V+  GGI F+ IRD  GI QV A       EI K 
Sbjct: 3   RTHYSNEITEELNGKRVKVAGWVQEVKDLGGIKFIWIRDREGIVQVTAPKKKVSQEIFKL 62

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFGEREY 120
              + SE V+ ++G+V                 E+  +K+E++S A+        G+ + 
Sbjct: 63  IPKLNSEDVIVVEGIVNFTPK-------AKLGFEVIPEKLEVISRAKTPLPLDPTGKVKA 115

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RF+DLR   +      R+ +  ++R    +E FIE  TP + A++ EG  + 
Sbjct: 116 ELDTRLDNRFMDLRNPKVMAIFKIRSSVFRAVREFFYSEGFIEIHTPKIIATATEGGTEL 175

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  + +F A  Q+PQ YKQ++MA+G D+ F+IAP FR E+  + R   E + +D E
Sbjct: 176 FPLKYFERDAFLA--QSPQLYKQMMMATGLDKVFEIAPIFRAEEHNTTRHLNEAWSIDAE 233

Query: 241 MSFVEQD-DILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAIRRYG 287
           M+F+E + ++++ +E ++  V       N                 F RI YD A+    
Sbjct: 234 MAFIENEGEVMDLLERLISYVINYVREHNEKELKTLEFELNEPKRPFPRITYDKALEILS 293

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
               ++          E       ++  K ++ N G +++ I          +  + +E 
Sbjct: 294 DLGKEIPWG-------EDIDTEGEKLLGKYMAENEGADLYFIYRYPSEAKPFYIMKYDEK 346

Query: 348 ARSQGQPGLAYIFWRLDESGNVAGMGPV 375
                   L Y    +   G       V
Sbjct: 347 PEVCRAFDLEYRGVEISSGGQREHRHDV 374



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 12/118 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +      PF         +   D        +DL   G EI+SGG R H  +V+L+    
Sbjct: 330 RYPSEAKPFY--------IMKYDEKPEVCRAFDLEYRGVEISSGGQREHRHDVLLEQIKE 381

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G++ +     F    +AF+ GMPPHGG   G +R++M +L   N+REV LFP  +  
Sbjct: 382 KGLNPKS----FEFYLKAFEYGMPPHGGFGLGAERLIMRMLDIGNIREVILFPRDRRR 435


>gi|150399675|ref|YP_001323442.1| aspartyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|166225362|sp|A6UQQ8|SYD_METVS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150012378|gb|ABR54830.1| aspartyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 438

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 96/323 (29%), Positives = 147/323 (45%), Gaps = 25/323 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH    +     G  V L GWVH +R  G + F+ +RD  G+ Q+V      D   FE+
Sbjct: 9   RTHYSEQVIPEMDGQEVILMGWVHSIRALGKLAFIILRDREGLIQMVVPKQKVDEETFEL 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           AK +  E V+ I G V++      N     G  E+   +I IL+ A+  LPL    +   
Sbjct: 69  AKKLGKEDVITIRGKVVA------NEKAPKG-FEVIPMEIRILNKADAPLPLDPSEKVPA 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RFLD+RR  +      R+ ++ S+R     E FIE +TP L AS+ EG  + 
Sbjct: 122 EIDTRLDRRFLDIRRPKIQAIFKIRSEMLKSIRKTFSEEGFIEVNTPKLVASATEGGTEL 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S   + +F  L Q+PQ YKQ++MA GFD+ F+IA  FR E+  + R   E   +D E
Sbjct: 182 FPISYFEKEAF--LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDTE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEF------------SNGNTVSNNFLRICYDDAIRRYGT 288
           MSFV + D +  +E V+   + +              N       F ++ Y +A+    +
Sbjct: 240 MSFVNEKDAMAMLEKVVHNCYTDIEYNRPSEIETLELNFEIPEKTFPKVTYSEAVDVAVS 299

Query: 289 DKPDLRNPIIMHNVTEHFVHSEF 311
              ++     +    E  +  E 
Sbjct: 300 KGVEIEWGEDLSRAAEKAIGDEM 322



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 64/175 (36%), Gaps = 31/175 (17%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D       +       +  A   I  E+G          +I ++P               
Sbjct: 295 DVAVSKGVEIEWGEDLSRAAEKAIGDEMG-------GLYFITEWP------------TQT 335

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
            PF            ND    KA  +DL+    EI+SG  R H  + ++Q  +  G++  
Sbjct: 336 RPFYTLPDE------NDNKICKA--FDLMYKELEISSGAQRIHKYDSLVQNIAKRGMNP- 386

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
              + F     AF+ GMPPH G   G DR  M+L   +N+RE  LFP  +     
Sbjct: 387 ---DSFETYLEAFRYGMPPHAGWGLGADRFTMILTNQENIRECVLFPRDRQRLTP 438


>gi|110800440|ref|YP_697153.1| lysyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|123344474|sp|Q0TMI7|SYK_CLOP1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|110675087|gb|ABG84074.1| lysyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 501

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 73/357 (20%), Positives = 148/357 (41%), Gaps = 25/357 (7%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTHS  D+        G  V+++G +   R  G ++F D+ D  G  Q+    D+   E 
Sbjct: 44  RTHSSADVKDNFEELEGKEVKVAGRLMSKRGQGKVVFADLADLPGKIQLFIKIDNVGEEA 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  ++  +    G  ++ + E     +  G++ +     E++  + + PLP        
Sbjct: 104 LKEFKTFDL----GDWVAATGEVFKTKM--GEVSVKVTSFELICKSLK-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
             +R++ R +D+  +   K+  +KR++I+ ++R  +    F+E  TPIL+  +    AR 
Sbjct: 157 PDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAGGAAARP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+ +GF++ +++   FR+E   S R   EF  +++
Sbjct: 217 FITHHNALDIDMY-LRIATELYLKRLIVAGFEKVYEMGKNFRNEGV-SVRHNPEFTAIEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D++  MEN++  V E+ +    V+     I +    RR           I M
Sbjct: 275 YEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWRR-----------ITM 323

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
            +  + F   +F             +   +            + +N      G+  L
Sbjct: 324 VDAVKEFAGIDFNEIKSDEEAQAIAKEKNLEFPKPLDKVTKGEVLNMLFEEYGEDKL 380



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 77/215 (35%), Gaps = 12/215 (5%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AY+  +++ S  V   G             +   +    G     I  D  +  + A +
Sbjct: 292 IAYVCEKVNGSTKVTYEGTEIDFTPPWRRITMVDAVKEFAGIDFNEIKSD-EEAQAIAKE 350

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
                 + L  +         +++  F E+ E+  K+         P       K     
Sbjct: 351 KNLEFPKPLDKVTKGE-----VLNMLFEEYGED--KLIQPTFLIDYPVEISPLTKKKRGN 403

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
            +   +++    G E+ +     +   V  + F      +E  ++           A + 
Sbjct: 404 EMFTERFEGFVYGREVCNAYSELNDPIVQRERFEQQAREREYGDDEAYMLDEEFMSALET 463

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           GMPP GG+  GIDR++M L  + ++R+V LFP  +
Sbjct: 464 GMPPTGGLGIGIDRMIMFLTDSSSIRDVILFPTMK 498


>gi|20094147|ref|NP_613994.1| aspartyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|22257050|sp|Q8TXG4|SYD_METKA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|19887157|gb|AAM01924.1| Aspartyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 431

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 89/309 (28%), Positives = 143/309 (46%), Gaps = 18/309 (5%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKS 64
              D+     G  VRL+GWVH VR  GGI F+ +RD  GI Q+           FE    
Sbjct: 6   YTADVTPERDGEEVRLAGWVHEVRDLGGIKFVLLRDRTGIVQLTLPKQKVPKETFEKVPK 65

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFGEREYPES 123
           +  E V+ ++G V +            G +E+  Q+IE+LS ++        G+ +    
Sbjct: 66  LTKESVIRVEGTVQANEK-------APGGVEVIPQRIEVLSESDTHLPLDPTGKVDADLD 118

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R   R LDLRR+        R  +  ++R  +    FIE  TP + AS+ EG  +    
Sbjct: 119 TRLDARVLDLRREEPQAIFKIRNVVTTAIREFLEERGFIEVHTPKIIASATEGGTELFPV 178

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++ A  Q+PQ YKQ+LMA+GF+R ++I P FR E+  + R   E   +D+EMSF
Sbjct: 179 VYFERDAYLA--QSPQLYKQMLMAAGFERVYEIGPIFRAEEHNTRRHLNEAISVDIEMSF 236

Query: 244 VE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           +E ++D++  +E +L  VF +           L    D  +    T    +     +  +
Sbjct: 237 IESEEDVMRVLEELLAHVFRKVREECEKELEAL----DRELPELETPFERITYEETLDLL 292

Query: 303 TEHFVHSEF 311
           +EH +  E+
Sbjct: 293 SEHGIEVEW 301



 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 11/155 (7%)

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI-DFAHNPFTMPQG--GMESLKGND 473
           R    + L +++ +  E  W  D P     E E+K+ +    PF + +            
Sbjct: 282 RITYEETLDLLSEHGIEVEWGEDLP----TEAERKLGEIFEEPFFITEWPRETRPFYTMA 337

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                   +DL+  G E+ASG  R H  +V+++     G+S       F     AF+ GM
Sbjct: 338 KDDEVTTAFDLMYQGLELASGAQREHRYDVLVRQIEEQGLSP----EDFRHYLEAFKYGM 393

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PPHGG   G++R +M + GA+N+REV+LFP  +  
Sbjct: 394 PPHGGWGLGLERTLMTITGAENIREVTLFPRDRKR 428


>gi|18311447|ref|NP_563381.1| lysyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|168218225|ref|ZP_02643850.1| lysyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|169343177|ref|ZP_02864198.1| lysyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|39932227|sp|Q8XHL8|SYK_CLOPE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|18146131|dbj|BAB82171.1| lysine-tRNA ligase [Clostridium perfringens str. 13]
 gi|169298729|gb|EDS80805.1| lysyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|182379764|gb|EDT77243.1| lysyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 501

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 73/357 (20%), Positives = 148/357 (41%), Gaps = 25/357 (7%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTHS  D+        G  V+++G +   R  G ++F D+ D  G  Q+    D+   E 
Sbjct: 44  RTHSSADVKDNFEELEGKEVKVAGRLMSKRGQGKVVFADLADLPGKIQLFIKIDNVGEEA 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  ++  +    G  ++ + E     +  G++ +     E++  + + PLP        
Sbjct: 104 LKEFKTFDL----GDWVAATGEVFKTKM--GEVSVKVTSFELICKSLK-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
             +R++ R +D+  +   K+  +KR++I+ ++R  +    F+E  TPIL+  +    AR 
Sbjct: 157 PDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAGGAAARP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+ +GF++ +++   FR+E   S R   EF  +++
Sbjct: 217 FITHHNALDIDMY-LRIATELYLKRLIVAGFEKVYEMGKNFRNEGV-SVRHNPEFTAIEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D++  MEN++  V E+ +    V+     I +    RR           I M
Sbjct: 275 YEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWRR-----------ITM 323

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
            +  + F   +F             +   +            + +N      G+  L
Sbjct: 324 VDAVKEFAGIDFNEIKSDEEAQAIAKEKNLEFPKPLDKVTKGEVLNMLFEEYGEDKL 380



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 77/215 (35%), Gaps = 12/215 (5%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AY+  +++ S  V   G             +   +    G     I  D  +  + A +
Sbjct: 292 IAYVCEKVNGSTKVTYEGTEIDFTPPWRRITMVDAVKEFAGIDFNEIKSD-EEAQAIAKE 350

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
                 + L  +         +++  F E+ E+  K+         P       K     
Sbjct: 351 KNLEFPKPLDKVTKGE-----VLNMLFEEYGED--KLIQPTFLIDYPVEISPLTKKKRGN 403

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
            +   +++    G E+ +     +   V  + F      +E  ++           A + 
Sbjct: 404 EMFTERFEGFVYGREVCNAYSELNDPIVQRERFEQQAREREYGDDEAYMLDEEFMSALET 463

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           GMPP GG+  GIDR++M L  + ++R+V LFP  +
Sbjct: 464 GMPPTGGLGIGIDRMIMFLTDSSSIRDVILFPTMK 498


>gi|309799291|ref|ZP_07693538.1| aspartyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308117069|gb|EFO54498.1| aspartyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 254

 Score =  220 bits (560), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 103/258 (39%), Positives = 147/258 (56%), Gaps = 12/258 (4%)

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           M    FI+  TP L+ S+PEGARD+LVPSRVN+G FYALPQ+PQ  KQLLM +GFDRY+Q
Sbjct: 1   MDELEFIDVETPFLSKSTPEGARDYLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQ 60

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           I  CFRDED R DR P EF Q+D+E SF+ + +I +  E ++  V +E      V+  F 
Sbjct: 61  IVKCFRDEDLRGDRQP-EFTQVDLETSFLTEQEIQDITEGLIARVMKETKGIE-VTLPFP 118

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
           R+ YDDA+  YG+DKPD R  +++ ++T+     +F+VFS+     P  +   +      
Sbjct: 119 RMKYDDAMAFYGSDKPDTRFEMLLQDLTDLVKGVDFKVFSEA----PAVKAIVVKGAADN 174

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
            +R   D+M E A+  G  GLA++     E       GPVAK L  +  + +   L ++D
Sbjct: 175 YSRKDIDKMTEVAKQYGAKGLAWVKVVDGELN-----GPVAKFLTGIQAD-LTTALGLED 228

Query: 396 GDSCFFIAGDPLKFCSFA 413
            D   F+A       +  
Sbjct: 229 KDLVLFVADTLEVANATL 246


>gi|220930923|ref|YP_002507831.1| Lysyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992233|gb|ACL68836.1| Lysyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 491

 Score =  219 bits (559), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 71/335 (21%), Positives = 126/335 (37%), Gaps = 22/335 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
               G  V LSG +   R HG   F DI+D  G  Q+    D    +  +      +   
Sbjct: 49  EEFEGKKVSLSGRIMAKRTHGKASFADIQDVTGKIQLYVKVDIVGEKEYELFTGLDI--- 105

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++  + E        GQI +      +L+ +   PLP        + +R++ R+LDL
Sbjct: 106 -GDIIGVTGEVF--KTRRGQISVKVHSFRLLTKSLR-PLPEKWHGLRDKELRYRQRYLDL 161

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSF 191
                + K  + R++II  +R  +  + F+E  TP++   +    AR F+          
Sbjct: 162 IVNPEVRKTFITRSKIIREIRKYLEDKGFLEVETPMMHPIAGGANARPFITHHNALDIDL 221

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E       P EF  L++  +  +  D+++
Sbjct: 222 Y-LRIAPELYLKRLIVGGFERVFEINRNFRNEGMSYKHNP-EFTMLELYQAQADYHDMMD 279

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E+++  V ++      +S     I                 N + M    +     +F
Sbjct: 280 LTEDLIYNVAKKVLGTTKISYQGQEIDLTPPW-----------NRVTMVEAVKEHTGVDF 328

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                        E   I  +G        + + E
Sbjct: 329 NEIKSDEEARKAAEGLGIELEGKPSRGKVLNEIFE 363



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 9/130 (6%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           +E   E+K +      F M      S      D      ++++   N +EIA+     + 
Sbjct: 362 FEEKVEDKLVQPT---FIMDYPIEVSPLAKRKDDNPDFTYRFEAFINSWEIANAFSELNN 418

Query: 501 SEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                + F      +   ++          RA + GMPP GG+  GIDR++M+L  + ++
Sbjct: 419 PIDQRERFEEQVKQRAQGDDEAQMMDEDYVRALEYGMPPTGGLGIGIDRLIMVLTDSPSI 478

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 479 RDVILFPTMR 488


>gi|225389818|ref|ZP_03759542.1| hypothetical protein CLOSTASPAR_03566 [Clostridium asparagiforme
           DSM 15981]
 gi|225044128|gb|EEG54374.1| hypothetical protein CLOSTASPAR_03566 [Clostridium asparagiforme
           DSM 15981]
          Length = 647

 Score =  219 bits (559), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 65/343 (18%), Positives = 134/343 (39%), Gaps = 27/343 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
               G  V ++G +   R  G   F +++D  G  Q+    D+   E  K  +   +  I
Sbjct: 52  EEWEGKEVSVAGRMMFKRVMGKASFCNVQDLKGSIQIYVARDNIGEEEYKGFKKMDIGDI 111

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      +        G+I + A ++ +LS + +  LP          +R++ R++DL
Sbjct: 112 IGV------KGTVFTTKAGEISIHATELTLLSKSLQ-VLPEKFHGLTDTDMRYRQRYVDL 164

Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +  +    VKR++II ++R  + ++NF+E  TP+L +++   A               
Sbjct: 165 IMNAEVKDTFVKRSKIIAAIRKYLSSQNFMEVETPMLVSNAGGAAARPFETHFNALDEDL 224

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++  
Sbjct: 225 KLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMMEL 283

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            EN+ R V +E     T++   + +              DL  P     + +        
Sbjct: 284 TENLYRYVAQEVLGTTTITYKGVEM--------------DLSKPFERITMVDAVKKYAGV 329

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM----NEWARSQ 351
            F +I ++     V               D +     E+A   
Sbjct: 330 DFDQIKTLEEARAVAKEKGVEFEPRHKKGDILSLFFEEFAEEH 372



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 57/159 (35%), Gaps = 30/159 (18%)

Query: 417 RNHIAQELGII-----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           R+     L +        +  +  +++D P               +P T  + G      
Sbjct: 354 RHKKGDILSLFFEEFAEEHLIQPTFVLDHP------------VEISPLTKKKPGNPDF-- 399

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYR 527
                    +++   NG+E+A+     +      + F          +            
Sbjct: 400 -------VERFEFFMNGWEMANAYSEINDPIDQRERFRAQEELLAQGDEEANHTDEDFLN 452

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  +
Sbjct: 453 ALEIGMPPTGGIGYGIDRMVMLLTDSAAIRDVLLFPTMK 491


>gi|266624958|ref|ZP_06117893.1| lysine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288863147|gb|EFC95445.1| lysine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 597

 Score =  219 bits (559), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 68/335 (20%), Positives = 134/335 (40%), Gaps = 15/335 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
               G  V ++G +   R  G   F +++D  G  Q     DS   E  K  +   +  I
Sbjct: 56  EEWEGKEVSVAGRMMSKRVMGKASFCNVQDLKGNIQTYVARDSIGEESYKDFKKLDIGDI 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      +       TG+I + A  + +L+ + ++ LP          +R++ R++DL
Sbjct: 116 VGI------KGTAFTTKTGEISIHATSVVLLTKSLQI-LPEKFHGLTNTDLRYRQRYVDL 168

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
                +    VKR++II ++R  +  + F+E  TP+L A++   A               
Sbjct: 169 VMNPEVRDTFVKRSQIIKAIRDHLDDQGFMEVETPMLVANAGGAAARPFETHYNALDEDV 228

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   +++ 
Sbjct: 229 KLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYHGMMDL 287

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +E++ R V  +      V+ + + I       R      D        + TE     E  
Sbjct: 288 VEDLFRSVALKVLGTAVVTYDGVEIDLSKPFER--ITMVDALKKYKGIDFTEIHTDEE-- 343

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
             +K L+     +  A   KG   +  F + + E 
Sbjct: 344 --AKALADQYHIQYEARHKKGDILSMLFEEFVEEH 376



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 57/162 (35%), Gaps = 30/162 (18%)

Query: 415 DARNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
           +AR+     L +     +  +  +  +IMD P               +P T  +      
Sbjct: 356 EARHKKGDILSMLFEEFVEEHLVQPTFIMDHP------------VEISPLTKRKPDDPDY 403

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
                      +++L     E+A+     +        F    + K   +          
Sbjct: 404 ---------TERFELFITKREMANAYSELNDPIDQRVRFEAQEVLKAAGDEEANSMDEDF 454

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             A   GMPP GGI  GIDR VMLL  +  +R+V LFP  ++
Sbjct: 455 LNALMIGMPPTGGIGIGIDRFVMLLTDSYAIRDVLLFPTMKS 496


>gi|291540501|emb|CBL13612.1| Lysyl-tRNA synthetase (class II) [Roseburia intestinalis XB6B4]
          Length = 498

 Score =  219 bits (559), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 64/289 (22%), Positives = 129/289 (44%), Gaps = 18/289 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            +  G  V ++G +   R  G   F +I+D  G  QV    D+   EI K  +   +  I
Sbjct: 52  ETMEGKQVSIAGRMMFKRVMGKASFCNIQDLKGRIQVYVARDNIGEEIYKDFKKSDIGDI 111

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      +       TG+I + A+++ +LS + ++ LP          +R++ R++DL
Sbjct: 112 WGV------KGYAFRTKTGEISIHAEEMTLLSKSLQI-LPEKFHGLTDTDMRYRQRYIDL 164

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   K   +KR++I+  +R  +   +F+E  TP+L +++   A               
Sbjct: 165 IMNQESKEVFIKRSKILKEIRNFLADRDFMEVETPMLVSNAGGAAARPFETHYNALNEDV 224

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++  
Sbjct: 225 KLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMEL 283

Query: 253 MENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
            E++ R + E+      +S N         F R+  +DAI++Y     D
Sbjct: 284 TESMFRYLAEKVCGSTKISYNGIEIDLGKPFTRMTMNDAIKKYTGIDFD 332



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K +D   +   +++L  N +E+ +     +      + F+    +    ++         
Sbjct: 393 KPSDPTKV--ERFELFINTWEMCNAYSELNDPVDQRERFAAQDANAAAGDDEAEHTDEDF 450

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++
Sbjct: 451 LNALEIGMPPTGGIGYGIDRLVMLLTDSAAIRDVLLFPTMKS 492


>gi|153952825|ref|YP_001393590.1| lysyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219853490|ref|YP_002470612.1| hypothetical protein CKR_0147 [Clostridium kluyveri NBRC 12016]
 gi|189082956|sp|A5N4L1|SYK_CLOK5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|146345706|gb|EDK32242.1| LysS [Clostridium kluyveri DSM 555]
 gi|219567214|dbj|BAH05198.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 502

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 74/345 (21%), Positives = 140/345 (40%), Gaps = 25/345 (7%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++     +  G+ V ++G +   R HG   F D+ D YG  Q+    +    E 
Sbjct: 44  RTHTSKEIKDNYETLDGTDVTVAGRLMSKRVHGKAGFSDLYDRYGKIQLYIKINDVGEEK 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  +S  +    G ++S S +       TG++ +     ++ + + + PLP        
Sbjct: 104 LKEYKSYDI----GDILSVSGKVF--KTRTGEVSIHITDFQLAAKSLK-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGAR-D 179
             +R++ R++DL  +   ++   KRT +I ++R  +   ++IE  TPIL++ +   A   
Sbjct: 157 PDLRYRQRYVDLIINQDVRDTFLKRTAVIRAIREFLDGRDYIEVETPILSSIAGGAAAKP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+  GF++ ++I   FR+E       P EF  +++
Sbjct: 217 FITHHNALDIDMY-LRIATELYLKRLIVGGFEKVYEIGKNFRNEGIDVRHNP-EFTAMEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             +F + +D++   EN+L  V E+      V      I +               N I M
Sbjct: 275 YEAFSDYNDMMELTENMLAYVCEKVLGTTKVIYQDTEIDFKPPW-----------NRITM 323

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            +  + F   +F                 I  K    +    D +
Sbjct: 324 VDAVKQFTKVDFNEVESDDEARKIAVEKNIELKKELKDCTKGDIL 368


>gi|302385515|ref|YP_003821337.1| lysyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302196143|gb|ADL03714.1| lysyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 501

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 71/339 (20%), Positives = 139/339 (41%), Gaps = 31/339 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F +++D  G  Q     DS   E  K  +   +  I G+ 
Sbjct: 62  GKEVSIAGRLMSKRVMGKASFCNVQDLKGNIQSYVARDSIGEEEYKEFKKLDIGDIVGI- 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                + I     TG+I + A+ + +L+ + ++ LP          IR++ R++DL  + 
Sbjct: 121 -----KGIAFTTKTGEISIHAESVHLLTKSLQI-LPEKFHGLTNTDIRYRQRYVDLIMNP 174

Query: 138 LHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
             ++  VKR+++I ++R  + A+ F+E  TP+L A++   A                L  
Sbjct: 175 EVRDTFVKRSQVIKAIRDHLDAQGFMEVETPMLVANAGGAAARPFETHYNALDEDVKLRI 234

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   +++ +EN+
Sbjct: 235 SLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYHGMMDLVENL 293

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF-- 314
            R V  +                  A+  Y   + DL  P     + +     +   F  
Sbjct: 294 FRSVALKVLG--------------TAVVSYDGVEIDLSKPFERITMVDALKKYKDIDFTA 339

Query: 315 ------SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
                 +K L+     E  A   KG   +  F + + E 
Sbjct: 340 VRTDEEAKALADQYHVEYEARHKKGDILSLLFEEFVEEH 378



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 57/162 (35%), Gaps = 30/162 (18%)

Query: 415 DARNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
           +AR+     L +     +  +  +  +IMD P               +P T  +      
Sbjct: 358 EARHKKGDILSLLFEEFVEEHLVQPTFIMDHP------------VEISPLTKKKPDDPDY 405

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
                      +++L     E+A+     +     ++ F          ++         
Sbjct: 406 ---------TERFELFITKREMANAYSELNDPLDQIERFKAQEALLAAGDDEANTMDDDF 456

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             A   GMPP GGI  GIDR VMLL  +  +R+V LFP  + 
Sbjct: 457 VNALMIGMPPTGGIGIGIDRFVMLLTDSYAIRDVLLFPTMKT 498


>gi|302672111|ref|YP_003832071.1| lysyl-tRNA synthetase LysS [Butyrivibrio proteoclasticus B316]
 gi|302396584|gb|ADL35489.1| lysyl-tRNA synthetase LysS [Butyrivibrio proteoclasticus B316]
          Length = 523

 Score =  219 bits (558), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 61/346 (17%), Positives = 130/346 (37%), Gaps = 23/346 (6%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L        V L+G +   R  G   F +++D  G  Q+  + +    E     +   + 
Sbjct: 78  LSEVPADKVVSLAGRMMSKRVMGKASFANLQDRDGRMQLYVSRNDLGDEAYADFKKMDIG 137

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G+      +       TG+I +  +++ +LS +  +PLP          IR++ R++
Sbjct: 138 DIIGV------KGFAFRTKTGEISVHVKELTLLSKSL-MPLPEKFHGLTDTEIRYRQRYV 190

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL  +   K   K R+ I+  +R  +   +F+E  TP+L  ++   A    +        
Sbjct: 191 DLIMNEDVKETFKKRSAILREIRNFLADRDFLEVETPMLVENAGGAAARPFITHYNALDE 250

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++
Sbjct: 251 ERKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMM 309

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
              E++ R + E+                   + +YG ++ DL  P     + +      
Sbjct: 310 ELTESMFRYLAEKVCGTT--------------LIKYGDNEIDLGKPFERLTMNDAIKKYA 355

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
              F  + +      +               D +N +     +  L
Sbjct: 356 GIDFDAVKTDEEAKALAKEHHIEFEDRHTKGDIINLFFEEYCEKNL 401



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 54/140 (38%), Gaps = 25/140 (17%)

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             N  +  +IMD P             A +P T  +         D   +   +++L  N
Sbjct: 398 EKNLIQPTFIMDHPL------------AISPLTKKKP-------TDPEKV--ERFELFIN 436

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGI 543
            +E+ +     +      + F+    +    +            A + GM P GGI  GI
Sbjct: 437 TWEMCNAYSELNDPIDQRERFAAQDANAAAGDEEAEHTDEDFLNALEIGMAPTGGIGYGI 496

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           DR+ MLL  ++ +R+V LFP
Sbjct: 497 DRLCMLLTDSETIRDVLLFP 516


>gi|19553881|ref|NP_601883.1| lysyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62391524|ref|YP_226926.1| lysyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|21325459|dbj|BAC00081.1| Lysyl-tRNA synthetase class II [Corynebacterium glutamicum ATCC
           13032]
 gi|41326866|emb|CAF20710.1| LYSYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 526

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 102/558 (18%), Positives = 190/558 (34%), Gaps = 116/558 (20%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            +    V ++G V  VR  G + F  I++  G T       +A  E  +S+++       
Sbjct: 75  EETDVEVAIAGRVMFVRNTGKLCFASIQEGNGTTVQAMLSLAAVGE--ESLKAWKADVDM 132

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++S   + I++    G++ + A    + S +       F   +  E  R ++R+ DL 
Sbjct: 133 GDIVSVRGKVISSK--RGELSVMADSWHMASKSLRPLPVAFA--DLSEDTRVRHRYTDLI 188

Query: 135 RDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
                + N + R +++ ++R  +  ++F+E  TP+L        AR F   S       Y
Sbjct: 189 MREQARTNALTRIKVMRALRHYLEDQDFLEVETPMLQTLHGGAAARPFETHSNALDIDLY 248

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y +  +  G +R F++   FR+E   S   P EF  L+   ++   +     
Sbjct: 249 -LRIAPELYLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFAMLETYEAWGTYETGAKL 306

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++ +++ V +E                                 + + + TE+ +  E++
Sbjct: 307 IKGLVQSVAQEVFGTTL---------------------------VTLADGTEYDLGGEWK 339

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
           V     S+N        P +      +  + + E A+  G          + E+G     
Sbjct: 340 VIEMYPSLNEALARK-FPGQPEVTIDSTVEELREIAKVIG--------LSVPENGGWGH- 389

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
                                                          I  EL +     +
Sbjct: 390 -----------------------------------------GKLVEEI-WEL-LCEDQLY 406

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ DFP      E   +   H                        ++DL   GFE+A
Sbjct: 407 GPIFVKDFPV-----ETSPLTRQHR----------------TKPGVTEKWDLYVRGFELA 445

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G        +  + F +        ++           A + GMPP  G   GIDR++M
Sbjct: 446 TGYSELIDPVIQRERFEDQARLAADGDDEAMVLDEDFLTAMEQGMPPTSGNGMGIDRLLM 505

Query: 549 LLLGAKNVREVSLFPMSQ 566
            L G   +RE  LFPM +
Sbjct: 506 ALTGLG-IRETVLFPMVK 522


>gi|226324189|ref|ZP_03799707.1| hypothetical protein COPCOM_01968 [Coprococcus comes ATCC 27758]
 gi|225207738|gb|EEG90092.1| hypothetical protein COPCOM_01968 [Coprococcus comes ATCC 27758]
          Length = 650

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 69/315 (21%), Positives = 132/315 (41%), Gaps = 22/315 (6%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   ++        G  V L+G +   R  G   F +++D  G  Q     DS   E  
Sbjct: 46  THHSQEVKDNFDELEGKHVVLAGRMMSKRVMGKASFCNVQDLQGNIQSYVARDSIGEEEY 105

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K+ +   +  I GL      E       TG+I + A  +++LS + ++ LP         
Sbjct: 106 KAFKKMDIGDIVGL------EGEVFKTKTGEISIHASAVKLLSKSLQI-LPEKFHGLTNT 158

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             R++ R++DL  +   K+  +KR++I+ ++R  +  E F+E  TP+L  ++   A    
Sbjct: 159 DTRYRQRYVDLIMNPEVKDTFIKRSKILTAIRKYLGNEGFMEVETPMLVQNAGGAAARPF 218

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 219 ETHFNALNEDLKLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQ 277

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY-GTDKP 291
           ++ +   +++  EN+ R V +E      +            F RI   DA+++Y G D  
Sbjct: 278 AYTDYHGMMDLTENLYRFVAQEVLGTTQIVYKGIEMDLGKPFERITMVDAVKKYAGVDWN 337

Query: 292 DLRNPIIMHNVTEHF 306
           ++        + +  
Sbjct: 338 EVETLEQARELAKAH 352



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 30/170 (17%)

Query: 407 LKFCSFAADARNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
            K  +   + R+     L +     +  +  +  ++MD P               +P T 
Sbjct: 349 AKAHNLEFEERHKKGDILNLFFEEYVEEHLLQPTFVMDHP------------VEISPLTK 396

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
            +                 +++   NG+E+A+     +      + F          ++ 
Sbjct: 397 KKPENPDY---------VERFEFFMNGWEMANAYSELNDPIDQRERFKAQEELLAQGDDE 447

Query: 522 F----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                     A + GMPP GGI  GIDR+ MLL GA+ +R+V LFP  ++
Sbjct: 448 ANTTDEDFMNALEIGMPPTGGIGFGIDRMCMLLTGAEAIRDVLLFPTMKS 497


>gi|21226176|ref|NP_632098.1| aspartyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|24212403|sp|Q8Q0R2|SYD_METMA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|20904406|gb|AAM29770.1| Aspartyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 444

 Score =  219 bits (557), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 99/350 (28%), Positives = 156/350 (44%), Gaps = 37/350 (10%)

Query: 5   RTHSCGDLGVSDV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYG---ITQVVANPDSACF 59
           RTH   D+    V  G  V L+GWVH VR  GGI F+ +RD  G   +T V    D   F
Sbjct: 7   RTHYTADVRPDKVENGQKVTLAGWVHEVRDLGGICFVVLRDREGKAQVTLVKKKIDKDLF 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER 118
           + A+ +  E V+ + G V                 EL   +I +L+V+   LP+   G+ 
Sbjct: 67  DAARRLVRESVISVTGSVKFEEK-------APNGYELLPDEINVLNVSGSPLPMDTTGKV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E     R   RF+DLRR         R   + ++R   +  NFIE +TP + A++ EG  
Sbjct: 120 EAELDTRLDSRFIDLRRAETTAVFKIRHESLRAIREYFVKYNFIETATPKVVATATEGGT 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                +  ++ +F  L Q+PQ +KQ+LM+ GFDR F+I P FR E+  + R   E   +D
Sbjct: 180 ALFPITYFDREAF--LNQSPQLFKQILMSGGFDRVFEIGPIFRAEEHDTRRHLNEATSID 237

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEF------------SNGNTVSNNFLRICYDDAI--- 283
           +E+SF +  D++  +EN++  V+                +       FL++ YD+ I   
Sbjct: 238 VEVSFADHFDVMELLENLVAYVYTRVIENCKSSLEVLGVDLKVPKTPFLKLTYDEVIEII 297

Query: 284 -------RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEV 326
                    +G D   L    +  +V E    S + +      + P Y +
Sbjct: 298 NSRCEEKMHWGDDLGTLGEHTVGDHVYETTGESHYFIIDWPTEIKPFYAM 347



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 83/226 (36%), Gaps = 47/226 (20%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AY++ R+ E+   +              E + V L +           + ++  +   +
Sbjct: 256 VAYVYTRVIENCKSS-------------LEVLGVDLKVPKTPFLKLTYDEVIEIINSRCE 302

Query: 416 ARNHIAQELGIINCNCF----------EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
            + H   +LG +  +               +I+D+P                PF      
Sbjct: 303 EKMHWGDDLGTLGEHTVGDHVYETTGESHYFIIDWP------------TEIKPFYAMPYE 350

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
                        +  +D++    E++SG  R H+  ++     + G++     + F   
Sbjct: 351 DRPEF--------SKSFDMMHRTMELSSGAQRIHIPSLLKNRIESQGLNP----DGFEFY 398

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            +AF+ GMPPH G   G +R VM +LG +N+R+  LFP  +     
Sbjct: 399 LKAFEFGMPPHAGWGMGCERFVMTMLGTENIRDTVLFPRDRRRLSP 444


>gi|332798251|ref|YP_004459750.1| Lysyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332695986|gb|AEE90443.1| Lysyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 493

 Score =  219 bits (557), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 71/341 (20%), Positives = 136/341 (39%), Gaps = 31/341 (9%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
           +H+C  +           V+++G +  +R HG   F DI+D+ G  QV    D+     F
Sbjct: 39  SHNCQQIKANFDELENQNVKIAGRIMAIRGHGKAAFFDIQDNTGKIQVYIRKDNVSDDTF 98

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
            + K +    ++ I+G V              G+I +S   + IL+ +   PLP      
Sbjct: 99  NLYKLLDIGDIVGIEGNVFKSKR---------GEISVSVNNMTILAKSLR-PLPEKWHGL 148

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGA 177
               IR++ R+LDL  +   K     R++II++MR  +  + F+E  TP+L+  +    A
Sbjct: 149 KDTDIRYRQRYLDLIVNPEVKQTFLTRSKIISAMRQFLDDKGFVEVETPVLSPIAGGAAA 208

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R F+          Y L  A + Y + L+  GF++ +++   FR+E       P EF  +
Sbjct: 209 RPFVTYHNALDMQLY-LRIATELYLKRLIVGGFEKVYELGKDFRNEGISIKHNP-EFTMV 266

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           ++  ++ +  D++   E+++  + E+      ++     I       R           +
Sbjct: 267 ELYQAYADYKDMMKLAEDMIAYIAEKVLGTTKITYQGEEIDLTPPWTR-----------M 315

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
            M    +HF   +F   +             I        +
Sbjct: 316 TMVEAVKHFTGIDFDSIASDEEARKVARELHIEEIKDCDTK 356



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 95/309 (30%), Gaps = 45/309 (14%)

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           F+       ++ Y     +L    ++    E          ++ +S+    E   +    
Sbjct: 211 FVTYHNALDMQLYLRIATELYLKRLIVGGFEKVYELGKDFRNEGISIKHNPEFTMVELYQ 270

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
              +     ++ E         +AYI  ++  +  +   G             +   +  
Sbjct: 271 AYADYKDMMKLAEDM-------IAYIAEKVLGTTKITYQGEEIDLTPPWTRMTMVEAVKH 323

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNH-------IAQELGII-----NCNCFEFCWIMDFP 441
             G   F       +    A +             + L +I       N  +  +I D+P
Sbjct: 324 FTG-IDFDSIASDEEARKVARELHIEEIKDCDTKGKVLNLIFEEKVEQNLVQPTFIYDYP 382

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
                          +P    +     L          ++++    G EIA+     +  
Sbjct: 383 ------------IEISPLAKKKEDNPDL---------TYRFEAFVTGREIANAFSELNDP 421

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E  +            A + GMPP GG+  G+DR+VMLL  + ++R
Sbjct: 422 IDQRERFLQQLKEREAGDEEAHAFDEDYINALEYGMPPTGGMGIGVDRLVMLLTDSYSIR 481

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 482 DVILFPTMR 490


>gi|282163375|ref|YP_003355760.1| aspartyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155689|dbj|BAI60777.1| aspartyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 434

 Score =  219 bits (557), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 91/322 (28%), Positives = 144/322 (44%), Gaps = 27/322 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+  +  GS V ++GWVH +R  GG+ FL +RD  G+ QV         EI  +
Sbjct: 3   RTHYSRDITPAMNGSTVTVNGWVHEIRDFGGLAFLILRDREGLVQVTMPKKKVSKEIVDT 62

Query: 65  VR---SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           V+    E V+ + G V +               EL    +E+LS A+  LPL   G+   
Sbjct: 63  VKGLSRESVVSVTGDVKAMEK-------APNGYELIPTALEVLSRADAPLPLDPTGKVPA 115

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RF+DLR   +      R  +I ++R  + ++  +E ++P + A++ EG  + 
Sbjct: 116 ELDTRLDSRFMDLRSPEVTAVFYVRANMIKAIRDYLSSQGCLEIASPKIVATATEGGTEL 175

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S   + +F  L Q+PQ YKQ++MA G DR ++I P FR E+  + +   E   +D+E
Sbjct: 176 FPISYFEREAF--LNQSPQLYKQMMMAGGMDRVYEIGPIFRAEEHATRKHLNEATSIDVE 233

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT------------VSNNFLRICYDDAIRRYGT 288
           +SF   +D +  +EN +   +                        F R+CY DAI     
Sbjct: 234 LSFATDEDAMRLLENTIAYAYAYVKEHCQAQLKVLNVDLQVPKTPFRRLCYRDAIEIAKK 293

Query: 289 D--KPDLRNPIIMHNVTEHFVH 308
           D    D+     +    EH V 
Sbjct: 294 DPECADIEYGDDLSTQAEHAVG 315



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 24/134 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           E  +I+++P                 F            ND    KA  +DL+    E++
Sbjct: 320 EHYFIVNWP------------TNIRAFYTQPCE------NDPSICKA--FDLMHPRMELS 359

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R +    +++     G+S       F     +F+ GMPPH G   G +R++  +L 
Sbjct: 360 SGAQREYRYAELVKKMEEKGLSP----ESFKFYLDSFRYGMPPHAGWGLGAERLLQTMLN 415

Query: 553 AKNVREVSLFPMSQ 566
             N+RE  LFP  +
Sbjct: 416 LNNIREAVLFPRDR 429


>gi|300780445|ref|ZP_07090301.1| lysyl-tRNA synthetase [Corynebacterium genitalium ATCC 33030]
 gi|300534555|gb|EFK55614.1| lysyl-tRNA synthetase [Corynebacterium genitalium ATCC 33030]
          Length = 508

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 109/574 (18%), Positives = 194/574 (33%), Gaps = 122/574 (21%)

Query: 3   RYRTHSCGDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           +Y T   G+L +    +    V ++G +   R  G + F  +++  G          +  
Sbjct: 44  KYSTAE-GELALEPGEETQDEVAVAGRIMFQRNTGKLCFATLQEGDGTQ---LQVMLSLA 99

Query: 60  EIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           E+ +   + W    D G ++S     I +    G++ + A    + S A       F   
Sbjct: 100 EVGEESLANWKADTDLGDIVSVRGRVIASK--RGELSVMASSWHMASKALRPLPVAFA-- 155

Query: 119 EYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
           +  E  R +YR+ DL  RD   KN + R ++I ++R  +   +F+E  TP+L        
Sbjct: 156 DMNEEQRVRYRYTDLIMRDDARKNALTRIKVIAALRKYLTGLDFVEVETPMLQTLHGGAA 215

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F   S       Y L  AP+ Y +  +  G DR F+I   FR+E   S   P EF  
Sbjct: 216 ARPFETHSNALDIDLY-LRIAPELYLKRCVVGGIDRVFEINRNFRNEGVDSSHSP-EFTM 273

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           ++   ++    D   T++  ++   +E     T                           
Sbjct: 274 METYQAWGTYKDGAETIKGAVQFCAQEVFGSTT--------------------------- 306

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           + + + T + +  +++V     S+N      A+  K  G      D              
Sbjct: 307 VTLADGTSYDLGGDWKVLEMYPSLNE-----ALARKFPGQPEVTIDS------------- 348

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
                                   +   + I   + ++           P          
Sbjct: 349 -----------------------TVDELKGIAAAIGLKV----------PENAGWGHGKL 375

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
              I +EL   +   +E  ++++FP               +P T                
Sbjct: 376 VEEIWEELC--SDQLYEPTFVINFP------------VETSPLTRDHRE---------KP 412

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               ++DL   GFE+A+G        +  + F +        ++           A + G
Sbjct: 413 RVTEKWDLYVRGFELATGYSELVDPVIQRERFEDQARLAADGDDEAMVLDEDFLAAMEQG 472

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP  G   GIDR++M L G   +RE  LFPM +
Sbjct: 473 MPPTAGTGMGIDRLLMALTGLG-IRETVLFPMVR 505


>gi|297616356|ref|YP_003701515.1| lysyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144193|gb|ADI00950.1| lysyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 487

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 71/312 (22%), Positives = 133/312 (42%), Gaps = 24/312 (7%)

Query: 5   RTHSCGDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           R  +  D+  +   + G  VR++G +   R HG   F +++D  G  Q+    +    E 
Sbjct: 33  RNATAADIKNNYPGNEGQAVRIAGRIMARRTHGKAGFANLQDQSGQIQLYFRLNDLGAEK 92

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +S  +  I G+      E       T +I +  Q +  L+ A   PLP        
Sbjct: 93  YELFKSMDIGDIIGV------EGTVFLTKTQEITVHVQDLVYLAKAL-NPLPEKWHGLKD 145

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
             +R++ R++DL  +   +   VKR++II  MR  +    F+E  TP++        AR 
Sbjct: 146 VELRYRQRYVDLIVNPPVREVFVKRSQIIREMRRYLDERGFLEVETPMMQPIPGGAAARP 205

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  GF++ ++I   FR+E   +   P EF  L++
Sbjct: 206 FITHHNALGIDLY-LRIAPELYLKRLLVGGFEKVYEINRNFRNEGISTKHNP-EFTMLEL 263

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTD 289
             ++ +  D++   E+++  V +       V            + R+   +A+++Y G D
Sbjct: 264 YQAYADFQDMMRLTEDLISSVVKSVFGTMVVEYQGSRLDFTPPWQRLPMLEAVKKYAGVD 323

Query: 290 KPDLRNPIIMHN 301
             DL++      
Sbjct: 324 FTDLKSDEEAQE 335



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVM----LQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             ++++     EIA+     +          +  +                  A + GMP
Sbjct: 393 TDRFEVFIMNREIANAFSELNDPIDQRSRFEKQVAKREKGDTEAHMMDEDYINALEYGMP 452

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 453 PAGGLGIGIDRLVMLLTDSPSIRDVILFP 481


>gi|145296683|ref|YP_001139504.1| lysyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|140846603|dbj|BAF55602.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 526

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 102/558 (18%), Positives = 189/558 (33%), Gaps = 116/558 (20%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            +    V ++G V  VR  G + F  I++  G T       +A  E  +S+++       
Sbjct: 75  EETDVEVAIAGRVMFVRNTGKLCFASIQEGNGTTVQAMLSLAAVGE--ESLKAWKADVDM 132

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++S   + I++    G++ + A    + S +       F   +  E  R ++R+ DL 
Sbjct: 133 GDIVSIRGKVISSK--RGELSVMADSWHMASKSLRPLPVAFA--DLSEDTRVRHRYTDLI 188

Query: 135 RDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
                + N + R +++ ++R  +  ++F+E  TP+L        AR F   S       Y
Sbjct: 189 MREQARTNALTRIKVMRALRHYLEDQDFLEVETPMLQTLHGGAAARPFKTHSNALDIDLY 248

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y +  +  G +R F++   FR+E   S   P EF  L+   ++   +     
Sbjct: 249 -LRIAPELYLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFAMLETYEAWGTYETGAKL 306

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++ +++ V +E                                 + + + TE+ +  E++
Sbjct: 307 IKGLVQSVAQEVFGTTL---------------------------VTLADGTEYDLGGEWK 339

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
           V     S+N        P        +  + + E A+  G          + E+G     
Sbjct: 340 VIEMYPSLNEALARK-FPGHPEVTIDSTVEELREIAKVIG--------LSVPENGGWGH- 389

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
                                                          I  EL +     +
Sbjct: 390 -----------------------------------------GKLVEEI-WEL-LCEDQLY 406

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ DFP      E   +   H                        ++DL   GFE+A
Sbjct: 407 GPIFVKDFPV-----ETSPLTRQHR----------------TKPGVTEKWDLYVRGFELA 445

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G        +  + F +        ++           A + GMPP  G   GIDR++M
Sbjct: 446 TGYSELIDPVIQRERFEDQARLAADGDDEAMVLDEDFLTAMEQGMPPTSGNGMGIDRLLM 505

Query: 549 LLLGAKNVREVSLFPMSQ 566
            L G   +RE  LFPM +
Sbjct: 506 ALTGLG-IRETVLFPMVK 522


>gi|71653289|ref|XP_815284.1| aspartyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70880329|gb|EAN93433.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 534

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 108/554 (19%), Positives = 183/554 (33%), Gaps = 71/554 (12%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R+ G V   R  G I F+ +R     +  V    +      K +  E ++   G ++   
Sbjct: 48  RIRGRVETTRIRGKIAFIHLRQPPCHSIQVVASAADIVRRVKELTPESIIDATGTLV--P 105

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
           AE    ++     EL A++++++S A         +       R  +R +D+R       
Sbjct: 106 AERPVTSVSCKNYELHAERVDVVSRAATPLPFPIKDCNTKLDTRLNHRVMDMRTPLTASV 165

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +   + +    R +++A  F+E  TP + A++ EG           Q  + A  Q+PQ Y
Sbjct: 166 LRLVSAVCQCFRKQLLAREFVEIHTPKMLAAASEGGSAVFTIDYFGQRGYLA--QSPQLY 223

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQ+++     R F+I P FR E   + R   EF  LD E               V+   +
Sbjct: 224 KQMVLMGDAMRVFEIGPVFRAEKSLTHRHLTEFVGLDAEF--------------VIEHSY 269

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL-RNPIIMHNVTEHFVHSEFRVFSKILSV 320
            E  +        L       I     D   L R         +    S   +       
Sbjct: 270 TEVLDV-------LESTVCAMIDHLQEDHAALVRQARESLADMDAAEGSPSALGRNQEKE 322

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARS---QGQPGLAYIFWRLDESGNVAGMGPVAK 377
                        G       D       +    G+ G+  I     ++       P   
Sbjct: 323 EASIVCELSEETLGAFGCLTTDATEAHLTTDCYHGRVGVGSI-----DAQRRNPRQPKVL 377

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
            L   +   + +   + D     F      +        R     ++ II+         
Sbjct: 378 RLTFDDAVRLLLDHHVVDQPPTDFTLPQERRIGEL---VRERYGVDVYIIDQ-------- 426

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
             FP                PF            +   +     +D+   G EI SG  R
Sbjct: 427 --FPL------------TARPFYT--------LPHPHKTESTCSFDMYLRGEEICSGSQR 464

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            H   ++LQ    + +    ++        AF+ G  PHGG   G++RIV+ LLGAK++R
Sbjct: 465 IHDITLLLQNMERLQVDAASLKE----YVDAFRYGAWPHGGFGLGLERIVLFLLGAKDIR 520

Query: 558 EVSLFPMSQNFCDL 571
           ++SLFP        
Sbjct: 521 QISLFPRDPKRLAP 534


>gi|313906159|ref|ZP_07839507.1| lysyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313468998|gb|EFR64352.1| lysyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 647

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 68/314 (21%), Positives = 129/314 (41%), Gaps = 22/314 (7%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   ++           V ++G +   R  G   F  I+D  G+ Q     D+   +  
Sbjct: 42  THHSQEIKDNFADLEEKDVSIAGRIMSKRVMGKASFCHIQDKQGMIQCYVARDALGEDEY 101

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K+ +   +  I G+      E       TG+  + A+KI +LS + + PLP         
Sbjct: 102 KAFKKMDIGDIVGI------EGFVFATKTGETSVHAKKITLLSKSLQ-PLPEKFHGLVDT 154

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            IR++ R++DL  +   K   +KR+ II  +R  +   +F+E  TP+L  ++   A    
Sbjct: 155 DIRYRQRYVDLIMNQEVKTTFIKRSEIIREIRNFLAGRDFMEVETPMLVDNAGGAAARPF 214

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           +      G    L  + + Y + L+  G +R F+I   FR+E       P EF  +++  
Sbjct: 215 ITHYNALGEDKKLRISLELYLKRLIVGGLERVFEIGRVFRNEGLDQRHNP-EFTLMELYQ 273

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY-GTDKP 291
           ++ + + ++   E++ R + E+     T+            F R+  +DAI+   G D  
Sbjct: 274 AYTDYNGMMELTESMFRYLAEKVCGTTTIQYEDKVIDLGKPFRRLTMEDAIKEETGIDFS 333

Query: 292 DLRNPIIMHNVTEH 305
            +        + + 
Sbjct: 334 TIETDEEAKALAKE 347



 Score = 97.1 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 14/158 (8%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES----LKGNDLL 475
           +A+E GI   +  +   I++  F++   E+K I      F M      S     K  D  
Sbjct: 344 LAKEKGIEYEDRHKKGDIVNL-FFDEFCEDKMIQPT---FIMDHPIEISPLTKKKPEDPS 399

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQC 531
            +   +++L  NG+E+ +     +      + F+      E  +            A + 
Sbjct: 400 KV--ERFELYINGWEMCNAYSELNDPIDQRERFAAQDALSEQGDEEAQHTDEDFLNALEI 457

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++  
Sbjct: 458 GMPPTGGIGYGIDRLVMLLTNSAAIRDVLLFPTMRSGS 495


>gi|291541637|emb|CBL14747.1| Lysyl-tRNA synthetase (class II) [Ruminococcus bromii L2-63]
          Length = 637

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 72/352 (20%), Positives = 143/352 (40%), Gaps = 29/352 (8%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           T +  +         V ++G +   R  G + F+D+ D  G  Q+ A  D    E    +
Sbjct: 43  TETIKNNFEEYENKDVCVAGRLLSKRGKGKVSFMDLWDRSGKIQIFAKFDDLGEEEYGFL 102

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           +   +  I         +        G+I + A+++++LS + + PLP          +R
Sbjct: 103 KKWDIGDI------VEVKGFVFKTQMGEISVHAKEVKLLSKSLK-PLPEKYHGLTNTDLR 155

Query: 126 FKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
           ++ R++DL  +   K+  VKR++II S+R  +  + F+E  TP+L A++    AR FL  
Sbjct: 156 YRQRYVDLIMNPEVKDTFVKRSKIIGSIRRYLDNQGFMEVETPMLVANAGGASARPFLTH 215

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                     L  + + Y + L+  G ++ ++I   FR+E   +   P EF  +++  ++
Sbjct: 216 FNALDEDL-KLRISLELYLKRLIVGGLEKVYEIGRVFRNEGVDTRHNP-EFTLMELYQAY 273

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            + + +++  EN+ R V +E     T++ N + +              DL  P     + 
Sbjct: 274 TDYNGMMDLTENLYRHVAQEVLGTTTITYNGIEM--------------DLGKPFERITML 319

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN----EWARSQ 351
           +         F++I S      +               D +N    E+A   
Sbjct: 320 DAVKKYSGVDFNEIHSDEEAKAIAKEKGVEFEERHKKGDILNLFFEEFAEEH 371



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 9/132 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLL-SIKAFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F M     +  L            +++   NG+E+A+     +
Sbjct: 363 FFEEFAEEHMIQPT---FVMDHPIEISPLTKKKPENPDYVERFEFFMNGWEMANAYSELN 419

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F          ++           A + GMPP GGI  GIDR+ MLL  +  
Sbjct: 420 DPIDQRERFKAQEALLAQGDDEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTDSAA 479

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  ++
Sbjct: 480 IRDVLLFPTMKS 491


>gi|307266257|ref|ZP_07547798.1| lysyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918707|gb|EFN48940.1| lysyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 499

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 72/330 (21%), Positives = 134/330 (40%), Gaps = 30/330 (9%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SAC 58
           RT+   D+     +  G  V L+G +   R HG   F DI+D  G  Q+    D      
Sbjct: 44  RTNVSSDIKNDYENFEGKVVTLAGRIMSKRAHGKASFADIQDRDGRIQIYIKYDTVGEKN 103

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +EI K +    ++ + G V             TG+I +     ++LS + ++ LP     
Sbjct: 104 YEIFKILDIGDIIGVTGEV---------FKSKTGEITIRVTDFKLLSKSLQI-LPEKWHG 153

Query: 119 EYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                +R++ R+ DL     + +  +KRT+II ++R  +    F+E  TPIL T +    
Sbjct: 154 LKDPDLRYRQRYTDLIINPEVKEVFLKRTKIIKAIREFLDNRGFLEVETPILHTIAGGAA 213

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ +++   FR+E       P EF  
Sbjct: 214 ARPFITHHNALDIDMY-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNP-EFTL 271

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY- 286
           L++  ++ +   ++   E +   V ++ +    +            + RI   DAI+ Y 
Sbjct: 272 LELYEAYTDYYGMMELTEQLFAYVAQKVNGTTKIVYQGTEIDLTPPWKRITMVDAIKEYV 331

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           G D  +++       + +           K
Sbjct: 332 GVDFNEVKTDAEAVEIAKRLNLETKEGMKK 361



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 20/240 (8%)

Query: 340 FCDRMNEWARSQGQPGL-----AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
             +    +    G   L     AY+  +++ +  +   G        ++      R+ M 
Sbjct: 271 LLELYEAYTDYYGMMELTEQLFAYVAQKVNGTTKIVYQG------TEIDLTPPWKRITMV 324

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
           D     ++  D  +  + A      IA+ L +      +   ++    ++   E+  I  
Sbjct: 325 DAIKE-YVGVDFNEVKTDAEAV--EIAKRLNLETKEGMKKGEVI-ALVFDELVEQHLIQP 380

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
                   +    + + +D       +++    G E+A+     +      + F      
Sbjct: 381 TFVMDYPVEISPLAKRKHD-NPAFTSRFEAFIYGREVANAFSELNDPIDQKERFLEQLKQ 439

Query: 515 KEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +E  +            A + GMPP GG+  G+DR+VM +  A ++R+V LFP  +   D
Sbjct: 440 REAGDEEAHMMDEDFINALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILFPTMKPRND 499


>gi|291526254|emb|CBK91841.1| Lysyl-tRNA synthetase (class II) [Eubacterium rectale DSM 17629]
          Length = 687

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 66/320 (20%), Positives = 134/320 (41%), Gaps = 19/320 (5%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F +I+D  G  QV    D+   +     +   +  I G+   
Sbjct: 100 EVSIAGRMMFKRVMGKASFCNIQDLKGNIQVYVARDNIGEDSYADFKKSDIGDIYGV--- 156

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
              +       TG+I + A++I +LS + ++ LP           R++ R++DL  +   
Sbjct: 157 ---KGFAFRTKTGEISIHAEEITLLSKSLQI-LPEKFHGLTDTDTRYRQRYVDLIMNQES 212

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
           K   +KR++I+  +R  +   +F+E  TP+L +++   A                L  + 
Sbjct: 213 KEVFIKRSQILKEIRNFLAGRDFMEVETPMLVSNAGGAAARPFETHYNALNEDVKLRISL 272

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++   E++ R
Sbjct: 273 ELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMELTESMFR 331

Query: 259 GVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKPDLRNPIIMHNVTEHFVH 308
            + E+      +S N         F R+   DAI++Y G D   + +      + +    
Sbjct: 332 YLAEKVCGSTKISYNGVEIDLGKPFARMTMIDAIKKYAGVDFDQVPDDAAAKKLADEHHI 391

Query: 309 SEFRVFSKILSVNPGYEVWA 328
                  K   VN  +E + 
Sbjct: 392 EYEERHKKGDIVNLFFEEYC 411



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 10/159 (6%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE--KKIDFAHNPFTMPQGGMESLKGN 472
            A   +A E  I      +   I++  F E+ E+E  +      +P  +    +   K +
Sbjct: 380 AAAKKLADEHHIEYEERHKKGDIVNLFFEEYCEKELIQPTFIMDHPIEISP--LTKKKPS 437

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRA 528
           D   +   +++L CN +E+ +     +      + F+    +    ++           A
Sbjct: 438 DPTKV--ERFELFCNTWEMCNAYSELNDPIDQRERFAAQDANAAAGDDEAEHTDEDFLNA 495

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + GMPP GGI  GIDR+VMLL  ++ +R+V LFP  ++
Sbjct: 496 LEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLFPTMKS 534


>gi|167039464|ref|YP_001662449.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300915430|ref|ZP_07132743.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307725210|ref|YP_003904961.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|238687610|sp|B0K5C0|SYK_THEPX RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166853704|gb|ABY92113.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300888490|gb|EFK83639.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307582271|gb|ADN55670.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 499

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 72/330 (21%), Positives = 134/330 (40%), Gaps = 30/330 (9%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SAC 58
           RT+   D+     +  G  V L+G +   R HG   F DI+D  G  Q+    D      
Sbjct: 44  RTNVSSDIKNDYENFEGKVVTLAGRIMSKRAHGKASFADIQDRDGRIQIYVKYDTVGEKN 103

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +EI K +    ++ + G V             TG+I +     ++LS + ++ LP     
Sbjct: 104 YEIFKILDIGDIIGVTGEV---------FKSKTGEITIRVTDFKLLSKSLQI-LPEKWHG 153

Query: 119 EYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                +R++ R+ DL     + +  +KRT+II ++R  +    F+E  TPIL T +    
Sbjct: 154 LKDPDLRYRQRYTDLIINPEVKEVFLKRTKIIKAIREFLDNRGFLEVETPILHTIAGGAA 213

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ +++   FR+E       P EF  
Sbjct: 214 ARPFITHHNALDIDMY-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNP-EFTL 271

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY- 286
           L++  ++ +   ++   E +   V ++ +    +            + RI   DAI+ Y 
Sbjct: 272 LELYEAYTDYYGMMELTEQLFAYVAQKVNGTTKIVYQGTEIDLTPPWKRITMVDAIKEYV 331

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           G D  +++       + +           K
Sbjct: 332 GVDFNEVKADAEAVEIAKRLNLETKEGMKK 361



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 20/240 (8%)

Query: 340 FCDRMNEWARSQGQPGL-----AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
             +    +    G   L     AY+  +++ +  +   G        ++      R+ M 
Sbjct: 271 LLELYEAYTDYYGMMELTEQLFAYVAQKVNGTTKIVYQG------TEIDLTPPWKRITMV 324

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
           D     ++  D  +  + A      IA+ L +      +   ++    ++   E+  I  
Sbjct: 325 DAIKE-YVGVDFNEVKADAEAV--EIAKRLNLETKEGMKKGEVI-ALVFDELVEQHLIQP 380

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
                   +    + + +D       +++    G E+A+     +      + F      
Sbjct: 381 TFVMDYPVEISPLAKRKHD-NPAFTSRFEAFIYGREVANAFSELNDPIDQKERFLEQLKQ 439

Query: 515 KEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +E  +            A + GMPP GG+  G+DR+VM +  A ++R+V LFP  +   D
Sbjct: 440 REAGDEEAHMMDEDFINALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILFPTMKPKND 499


>gi|168215147|ref|ZP_02640772.1| lysyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170713448|gb|EDT25630.1| lysyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 501

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 73/357 (20%), Positives = 147/357 (41%), Gaps = 25/357 (7%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTHS  D         G  V+++G +   R  G ++F D+ D  G  Q+    D+   E 
Sbjct: 44  RTHSSADAKDNFEELEGKEVKVAGRLMSKRGQGKVVFADLADLPGKIQLFIKIDNVGEEA 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  ++  +    G  ++ + E     +  G++ +     E++  + + PLP        
Sbjct: 104 LKEFKTFDL----GDWVAATGEVFKTKM--GEVSVKVTSFELICKSLK-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
             +R++ R +D+  +   K+  +KR++I+ ++R  +    F+E  TPIL+  +    AR 
Sbjct: 157 PDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTPILSPIAGGAAARP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+ +GF++ +++   FR+E   S R   EF  +++
Sbjct: 217 FITHHNALDIDMY-LRIATELYLKRLIVAGFEKVYEMGKNFRNEGV-SVRHNPEFTAIEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D++  MEN++  V E+ +    V+     I +    RR           I M
Sbjct: 275 YEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWRR-----------ITM 323

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
            +  + F   +F             +   +            + +N      G+  L
Sbjct: 324 VDAVKEFAGIDFNEIKSDEEAQAIAKEKNLEFPKPLDKVTKGEVLNMLFEEYGEDKL 380



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 77/215 (35%), Gaps = 12/215 (5%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +AY+  +++ S  V   G             +   +    G     I  D  +  + A +
Sbjct: 292 IAYVCEKVNGSTKVTYEGTEIDFTPPWRRITMVDAVKEFAGIDFNEIKSD-EEAQAIAKE 350

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
                 + L  +         +++  F E+ E+  K+         P       K     
Sbjct: 351 KNLEFPKPLDKVTKGE-----VLNMLFEEYGED--KLIQPTFLIDYPVEISPLTKKKRGN 403

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
            +   +++    G E+ +     +   V  + F      +E  ++           A + 
Sbjct: 404 EMFTERFEGFVYGREVCNAYSELNDPIVQRERFEQQAREREYGDDEAYMLDEEFMSALET 463

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           GMPP GG+  GIDR++M L  + ++R+V LFP  +
Sbjct: 464 GMPPTGGLGIGIDRMIMFLTDSSSIRDVILFPTMK 498


>gi|4388836|pdb|1B8A|A Chain A, Aspartyl-Trna Synthetase
 gi|4388837|pdb|1B8A|B Chain B, Aspartyl-Trna Synthetase
          Length = 438

 Score =  218 bits (555), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 168/414 (40%), Gaps = 39/414 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACF 59
            YRTH   ++     G  V+++GWV  V+  GGI FL IRD  GI Q+ A     D   F
Sbjct: 1   MYRTHYSSEITEELNGQKVKVAGWVWEVKDLGGIKFLWIRDRDGIVQITAPKKKVDPELF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFGER 118
           ++   +RSE V+ ++G+V                 E+  +KI +L+ AE        G+ 
Sbjct: 61  KLIPKLRSEDVVAVEGVVNFTPK-------AKLGFEILPEKIVVLNRAETPLPLDPTGKV 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +     R   RF+DLRR  +      R+ +  ++R       FIE  TP + A++ EG  
Sbjct: 114 KAELDTRLNNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATEGGT 173

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +        + +F A  ++PQ YK+++MASG DR ++IAP FR E+  + R   E + +D
Sbjct: 174 ELFPMKYFEEDAFLA--ESPQLYKEIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSID 231

Query: 239 MEMSFV-EQDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAIRR 285
            EM+F+ +++++++ +E ++          N                 F R+ YD A+  
Sbjct: 232 SEMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDILNFELEEPKLPFPRVSYDKALEI 291

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
            G    ++     +    E  +              P Y ++  P++         D   
Sbjct: 292 LGDLGKEIPWGEDIDTEGERLLGKYMMENENA----PLYFLYQYPSEAKPFYIMKYDNKP 347

Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPV------AKHLNIVNTEAIRVRLDM 393
           E  R      L Y    +   G       +       K LN  + E        
Sbjct: 348 EICR---AFDLEYRGVEISSGGQREHRHDILVEQIKEKGLNPESFEFYLKAFRY 398



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 4/103 (3%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +   D        +DL   G EI+SGG R H  +++++     G++       F    +A
Sbjct: 340 IMKYDNKPEICRAFDLEYRGVEISSGGQREHRHDILVEQIKEKGLNP----ESFEFYLKA 395

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           F+ GMPPHGG   G +R++  +L   N+REV LFP  +     
Sbjct: 396 FRYGMPPHGGFGLGAERLIKQMLDLPNIREVILFPRDRRRLTP 438


>gi|290476398|ref|YP_003469303.1| lysine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289175736|emb|CBJ82539.1| lysine tRNA synthetase, constitutive [Xenorhabdus bovienii SS-2004]
          Length = 504

 Score =  218 bits (555), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 79/358 (22%), Positives = 145/358 (40%), Gaps = 35/358 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   +  +L   ++   V ++G +   R  G   F  ++D  G  QV  + D     I 
Sbjct: 51  KYDDKTQEELEALNI--EVTVAGRMMTRRIMGKASFATLQDMGGRIQVYVSRDDLPEGIY 108

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
                +W L   G ++    +       TG++ +   ++ +L+ A   PLP        +
Sbjct: 109 NEQFKKWDL---GDILGARGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLADQ 162

Query: 123 SIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
            +R++ R+LDL  +   +     R+RI+ ++R  M+ ++F+E  TP++ A      AR F
Sbjct: 163 EMRYRQRYLDLISNDESRKTFQIRSRIMAALRNFMVKKDFMEVETPMMQAIPGGASARPF 222

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                      Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ 
Sbjct: 223 TTHHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SPRHNPEFTMMELY 280

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M++ +  D++   E + R + +E                   + +YG  + D   P    
Sbjct: 281 MAYADYQDLIVLTEELFRTLTQEVLGTT--------------LVKYGEQEFDFGKPFTKM 326

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351
           ++ E          + I  ++   +  AI         K  G  R  C+   E A S 
Sbjct: 327 SMKEAICKYRPE--TNIADLDDMDKAVAIAKSLGIDIEKSWGLGRIQCEIFEETAESH 382



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 64/201 (31%), Gaps = 17/201 (8%)

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
                  K    ++ +    +   +   +        +             +  LG I C
Sbjct: 314 EQEFDFGKPFTKMSMKEAICKYRPETNIADLDDMDKAVAIAKSLG-IDIEKSWGLGRIQC 372

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
             FE               E  +         P       + ND       +++    G 
Sbjct: 373 EIFE------------ETAESHLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGR 420

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMPPHGGIAAGIDR 545
           EI +G    + +E   + F+     K+  ++           A + G+PP  G+  GIDR
Sbjct: 421 EIGNGFSELNDAEDQAERFAEQVRHKDEGDDEAMFYDDDYVTALEHGLPPTAGLGIGIDR 480

Query: 546 IVMLLLGAKNVREVSLFPMSQ 566
           +VML   +  +R+V LFP  +
Sbjct: 481 MVMLFTDSHTIRDVILFPAMR 501


>gi|322381159|ref|ZP_08055162.1| lysyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154735|gb|EFX47006.1| lysyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 524

 Score =  218 bits (555), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 63/296 (21%), Positives = 130/296 (43%), Gaps = 22/296 (7%)

Query: 2   HRY-RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
            +Y RT   GD+           +++ G  V ++G + + R  G   F  ++D  G  Q+
Sbjct: 57  KKYERTDYAGDILSKYAETGKEELNEQGIQVSVAGRIMQKRGMGKASFAHVQDISGKIQI 116

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D+   +  K+     +  I G+      +       TG+  +  + +E+L+ +  +
Sbjct: 117 YVRLDAVGEDKYKAFEMLDLGDIIGV------KGTVFKTKTGETSIKVKDLEVLTKSL-I 169

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP          +R++ R++DL  +  + K  + R++II SMRC + +  F+E  TP L
Sbjct: 170 PLPDKFHGLQDVELRYRQRYVDLIMNQDVQKTFILRSKIIQSMRCYLDSLGFLEVETPTL 229

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            A +    AR F+          Y +  A + + + L+  G ++ ++I   +R+E   + 
Sbjct: 230 HAIAGGASARPFITHHNALDMQLY-MRIAIELHLKRLIVGGLEKVYEIGRVYRNEGVSTR 288

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
             P EF  +++  ++ +  DI+   E+++  + +E     T+      +    A R
Sbjct: 289 HNP-EFTMIELYEAYADYKDIMQLTEDLISHIAKEVLGSTTIEYQGKEVNLAGAWR 343



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 12/159 (7%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDL 474
           + +A+E  +       F  I++  F+E   EE  I       +P  +    +      D 
Sbjct: 369 HRLAKEHNVPVEPNMTFGHIVN-QFFETFVEETLIQPTFVYGHPVAISP--LAKKNEEDP 425

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++L     E A+     +      + F      +E   +          RA +
Sbjct: 426 R--FTDRFELFIVAREHANAFTELNDPIDQRERFEAQLREREQGNDEAHMMDEDFIRALE 483

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G+PP GG+  G+DR++MLL  A ++R+V LFP  +   
Sbjct: 484 YGLPPTGGLGIGVDRLIMLLTNAPSIRDVLLFPTMRERQ 522


>gi|288554692|ref|YP_003426627.1| lysyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288545852|gb|ADC49735.1| lysyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 499

 Score =  218 bits (555), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 71/392 (18%), Positives = 138/392 (35%), Gaps = 38/392 (9%)

Query: 5   RTHSCG-------DLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+         +L   ++   G  V L+G +   R  G   F  I+D  G  Q+    
Sbjct: 35  RTHTAKTMESTFTELSKEELEEQGHEVTLAGRIMTKRGKGKAGFAHIQDLSGQVQIYVRK 94

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E      S  +  I G+               G++ +     +ILS +   PLP 
Sbjct: 95  DAVGEEQYDLFTSIDIGDIVGV------TGTAFKTKVGELSVKVTDFQILSKSLR-PLPD 147

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                     R++ R++DL  +   ++  V R++I+ SMR  +    F+E  TP + + +
Sbjct: 148 KFHGLKDIEQRYRQRYVDLIMNPEVRDTFVLRSKILQSMRRYLDNRGFLEVETPTMHSIA 207

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+        + Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 208 GGASARPFVTHHNALDMTLY-MRIAIELHLKRLIVGGMEKVYEIGRVFRNEGVSTRHNP- 265

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  DI+   E ++  +  E                      Y  D   
Sbjct: 266 EFTMIELYEAYADYQDIMELTEELVAHIAREVLG-----------TTKVTYGEYEVDLEP 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
               + M +  +     +F             +   +P K         +   E    + 
Sbjct: 315 KWTRVHMVDAIKEKSGVDFWPEMTDEEARALAKEHKVPVKETMTYGHVVNEFFEHFVEES 374

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
                +I+      G+   + P+AK       
Sbjct: 375 LIQPTFIY------GHPTAISPLAKKNPEDER 400



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F        S   K N        +++L   G E A+     +
Sbjct: 366 FFEHFVEESLIQPT---FIYGHPTAISPLAKKNPEDERFTDRFELFIVGREHANAFSELN 422

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 Q F    + +E  ++           + + GMPP GG+  GIDR+VMLL  + +
Sbjct: 423 DPIDQRQRFEQQLVEREQGDDEAHMMDEDFVESLEYGMPPTGGLGIGIDRLVMLLTNSPS 482

Query: 556 VREVSLFPMSQNFC 569
           +R+V LFP  +N  
Sbjct: 483 IRDVLLFPQMRNRE 496


>gi|71661457|ref|XP_817749.1| aspartyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70882960|gb|EAN95898.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 534

 Score =  218 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 106/554 (19%), Positives = 182/554 (32%), Gaps = 71/554 (12%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R+ G V   R  G I F+ +R     +  V    +      K +  E ++   G ++   
Sbjct: 48  RIRGRVETTRVRGKIAFIHLRQPPCHSIQVVASAADIVRRVKELTPESIIDATGTLVPAE 107

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
               +A+      EL A++++++S A         +       R  +R +D+R       
Sbjct: 108 RPVTSASCKN--YELHAERVDVVSRAATPLPFPIKDCNTRLDTRLNHRVVDMRTPLTASV 165

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +   + +    R +++A +F+E  TP +  ++ EG           Q  + A  Q+PQ Y
Sbjct: 166 LRLVSAVCQCFRKQLLARDFVEIHTPKMLGAASEGGSAVFTIDYFGQRGYLA--QSPQLY 223

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQ+++     R F+I P FR E   + R   EF  LD E               V+   +
Sbjct: 224 KQMVLMGDAMRVFEIGPVFRAEKSLTHRHLTEFVGLDAEF--------------VIEHSY 269

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL-RNPIIMHNVTEHFVHSEFRVFSKILSV 320
            E  +        L       I     D   L R         +    S   +       
Sbjct: 270 TEVLDV-------LESTVCAMIDHLQEDHAALVRQARESLADMDAAEGSPSALGRNQEKE 322

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARS---QGQPGLAYIFWRLDESGNVAGMGPVAK 377
                        G       D       +    G+ G+  I  +           P   
Sbjct: 323 EASIVCELSEETLGAFGCLTTDATEAHLTTDCYHGRVGVGSIDTQRRN-----PRQPKVL 377

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
            L   +   + +   + D     F      +        R     ++ II+         
Sbjct: 378 RLTFDDAVRLLLDHHVVDQPPTDFSLPQERRIGEL---VRERYGVDVYIIDQ-------- 426

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
             FP                PF            +   +     +D+   G EI SG  R
Sbjct: 427 --FPL------------TARPFYT--------LPHPHKTESTCSFDMYLRGEEICSGAQR 464

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            H   ++LQ    + +    +++       AF+ G  PHGG   G++RIV+ LLGAK++R
Sbjct: 465 IHDITLLLQNMERLQVDAASLKD----YVDAFRYGAWPHGGFGLGLERIVLFLLGAKDIR 520

Query: 558 EVSLFPMSQNFCDL 571
           ++SLFP        
Sbjct: 521 QISLFPRDPKRLAP 534


>gi|261820185|ref|YP_003258291.1| lysyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261604198|gb|ACX86684.1| lysyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 505

 Score =  218 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 19/284 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + ++G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L  
Sbjct: 61  LEELGIEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              D        R+ ++ ++R  M+   F+E  TP++ A      AR F+          
Sbjct: 175 IANDESRNTFRIRSNVMAAIRRFMVDHGFMEVETPMMQAIPGGASARPFITHHNALDIDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYKDLIV 292

Query: 252 TMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY 286
             EN+ R + ++                   F ++   +AI +Y
Sbjct: 293 LTENLFRTLTQDVLGSTTVVYGDQTFDFGKPFEKLTMREAICKY 336



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 8/151 (5%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLS 476
             IAQ LGI     +    I+    +E   E   I       T     +  L + ND   
Sbjct: 352 TAIAQSLGIKIEKSWGLGRIV-TEIFEETAESSLIQPTF--ITEYPAEVSPLARRNDQNP 408

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCG 532
               +++    G EI +G    + +E   + F+    +K+  ++           A + G
Sbjct: 409 EITDRFEFFIGGREIGNGFSELNDAEDQAERFAQQVNAKDAGDDEAMFYDEDYVTALEHG 468

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 469 LPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|227873284|ref|ZP_03991549.1| possible lysine--tRNA ligase [Oribacterium sinus F0268]
 gi|227840851|gb|EEJ51216.1| possible lysine--tRNA ligase [Oribacterium sinus F0268]
          Length = 651

 Score =  218 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 61/300 (20%), Positives = 124/300 (41%), Gaps = 21/300 (7%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   ++     S     V ++G +   R  G   F+ ++D  G  QV  + +S   E  
Sbjct: 45  THHSTEIKENFKSLENQQVVIAGRILSKRVMGKASFMHLQDRDGRIQVYVSRESLGEEEY 104

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  +   +    G ++          +  G+I +  +KI +LS +   PLP         
Sbjct: 105 KKFKKLDL----GDIVEVRGYVFETQM--GEISVHGEKITLLSKSL-YPLPEKFHGLTDT 157

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             R++ R++DL  +   +   +KR++I+  +R  +   +F+E  TP+L  ++   A    
Sbjct: 158 DTRYRQRYVDLIMNEDSRTVFMKRSQILREIRNFLAGRDFLEVETPMLVENAGGAAARPF 217

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 218 ETHYNALNEDVKLRISLELYLKRLIIGGMERVYEIGRVFRNEGIDTRHNP-EFTLMELYQ 276

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           ++ + + ++   E++ R + E+      +S           F R+   +AI+ Y     D
Sbjct: 277 AYTDYEGMMELTESMFRYLAEKVCGTLHISYQGTPIDLESPFRRLTMTEAIKEYAGIDFD 336



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 13/134 (9%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES----LKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           F+E   EEK +      F M      S     K +D   +   +++L   G E+A+    
Sbjct: 368 FFEEYCEEKLVQPT---FIMDHPVEISPLTKKKPSDPSKV--ERFELFIYGREMANAYSE 422

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
            +      + F       +  +            A + GMPP GGI  GIDR+VMLL  A
Sbjct: 423 LNDPIDQRERFKAQDALADAGDEEANHTDEDFLHAMEIGMPPTGGIGYGIDRLVMLLTDA 482

Query: 554 KNVREVSLFPMSQN 567
            ++R+V LFP  ++
Sbjct: 483 ASIRDVLLFPTMKS 496


>gi|294507857|ref|YP_003571915.1| Asparaginyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294344185|emb|CBH24963.1| Asparaginyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 520

 Score =  218 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 101/556 (18%), Positives = 171/556 (30%), Gaps = 75/556 (13%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---IAKSVRSEWV 70
              V   V L GW+H  R  GGI FL +RD  G  Q V   D+   +   +A  VR E  
Sbjct: 30  ADHVDETVTLKGWLHNQRGSGGIKFLILRDGSGFVQCVVPQDAVDADSWAVADDVRQEAA 89

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L I G V +            G  EL    +E +  + + P+     +E+      ++R 
Sbjct: 90  LEITGSVSADER-------APGGYELQVDAVERIGESGDYPVTP---KEHGIDFLMEHRH 139

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR ++    +  R RI  ++        F++   PILT ++ EG          +  S
Sbjct: 140 LWLRSESQWAVMRIRNRIETAIHEFFQERGFLQTDAPILTGNAVEGTSTLFDLDYFDDES 199

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q+ Q +    MA  + + +   P FR E   + R   EF+ ++ EM+F + +   
Sbjct: 200 AY-LTQSGQLH-GEAMAMAYGKVYTFGPTFRAEKSATRRHLTEFWMIEPEMAFYDLEMNA 257

Query: 251 NTMENVLRGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
              E+ +  + +    +         R             +      + +    E     
Sbjct: 258 QLAEDFVAHIVQAVLEDCEEELEALDRDTSALEQVETPFPRISYDEAVELLRSDETAEMI 317

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
           + R+ +         E         G  +    R  +    +       I  R+DE    
Sbjct: 318 DERIEALNEEKAELLEEKEENQTRRGQAKKHVKRKIDAREIE-------INKRVDEIEEA 370

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
               P  K      T          D     +    P+                      
Sbjct: 371 LRNLPDWK--ESAQTFEWGEDFGGDDETVLTWHFDRPVIV-------------------- 408

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
                                +       F M +   +      +  +            
Sbjct: 409 --------------------HRFPAEIKAFYMKRDPDDDRLAMGIDVLAPEG------YG 442

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  GG R    + + +      +     E+ F       + G  PH G   G++R V  
Sbjct: 443 EIIGGGERATDLDFLKEQIEAHDLP----EDVFDWYLDLRKFGSVPHSGFGLGLERTVSW 498

Query: 550 LLGAKNVREVSLFPMS 565
           + G  +VRE   FP +
Sbjct: 499 ITGRDHVRETIPFPRT 514


>gi|297207380|ref|ZP_06923819.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300910339|ref|ZP_07127792.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|296887943|gb|EFH26837.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300888328|gb|EFK83515.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 515

 Score =  218 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 144/377 (38%), Gaps = 26/377 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D    +     +
Sbjct: 67  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 126

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +  I G+      E +     TG++ + A+K  +L+ +   PLP           R+
Sbjct: 127 NADLGDIVGV------EGVMFKTNTGELSVKAKKFTLLTKSLR-PLPDKFHGLQDIEQRY 179

Query: 127 KYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +    +  + R++II  MR  +  + F+E  TP++   +   A    V   
Sbjct: 180 RQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTHH 239

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 240 NALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYAD 298

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E+++R +  E      V  N   I  + A  R             + +  + 
Sbjct: 299 YHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTRLH-----------IVDAVKE 347

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
               +F             +   I  K       +   +NE+   + +  L    +    
Sbjct: 348 ATGVDFYEVKSDDEAKALAKEHGIEIK---DTMKYGHILNEFFEQKVEETLIQPTFIY-- 402

Query: 366 SGNVAGMGPVAKHLNIV 382
            G+   + P+AK     
Sbjct: 403 -GHPTEISPLAKKNPED 418



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
           +A+E GI   +  ++  I++  F+E   EE  I      F       +  L   +    +
Sbjct: 365 LAKEHGIEIKDTMKYGHILN-EFFEQKVEETLIQPT---FIYGHPTEISPLAKKNPEDPR 420

Query: 479 -AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGM 533
              +++L   G E A+     +        F    + K    +           A + GM
Sbjct: 421 FTDRFELFIVGREHANAFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDEDYIEALEYGM 480

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 481 PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQ 514


>gi|258424447|ref|ZP_05687326.1| lysyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845316|gb|EEV69351.1| lysyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 515

 Score =  218 bits (554), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 144/377 (38%), Gaps = 26/377 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D    +     +
Sbjct: 67  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 126

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +  I G+      E +     TG++ + A+K  +L+ +   PLP           R+
Sbjct: 127 NADLGDIVGV------EGVMFKTNTGELSVKAKKFTLLTKSLR-PLPDKFHGLQDIEQRY 179

Query: 127 KYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +    +  + R++II  MR  +  + F+E  TP++   +   A    V   
Sbjct: 180 RQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTHH 239

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 240 NALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYAD 298

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E+++R +  E      V  N   I  + A  R             + +  + 
Sbjct: 299 YHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTRLH-----------IVDAVKE 347

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
               +F             +   I  K       +   +NE+   + +  L    +    
Sbjct: 348 ATGVDFYEVKSDEEAKALAKEHGIEIK---DTMKYGHILNEFFEQKVEETLIQPTFIY-- 402

Query: 366 SGNVAGMGPVAKHLNIV 382
            G+   + P+AK     
Sbjct: 403 -GHPTEISPLAKKNPED 418



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
           +A+E GI   +  ++  I++  F+E   EE  I      F       +  L   +    +
Sbjct: 365 LAKEHGIEIKDTMKYGHILN-EFFEQKVEETLIQPT---FIYGHPTEISPLAKKNPEDPR 420

Query: 479 -AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGM 533
              +++L   G E A+     +        F    + K    +           A + GM
Sbjct: 421 FTDRFELFIVGREHANAFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDEDYIEALEYGM 480

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 481 PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQ 514


>gi|238922489|ref|YP_002936002.1| lysyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238874161|gb|ACR73868.1| lysyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 537

 Score =  218 bits (554), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 66/320 (20%), Positives = 134/320 (41%), Gaps = 19/320 (5%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F +I+D  G  QV    D+   +     +   +  I G+   
Sbjct: 100 EVSIAGRMMFKRVMGKASFCNIQDLKGNIQVYVARDNVGEDSYADFKKSDIGDIYGV--- 156

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
              +       TG+I + A++I +LS + ++ LP           R++ R++DL  +   
Sbjct: 157 ---KGFAFRTKTGEISIHAEEITLLSKSLQI-LPEKFHGLTDTDTRYRQRYVDLIMNQES 212

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
           K   +KR++I+  +R  +   +F+E  TP+L +++   A                L  + 
Sbjct: 213 KEVFIKRSQILKEIRNFLAGRDFMEVETPMLVSNAGGAAARPFETHYNALNEDVKLRISL 272

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++   E++ R
Sbjct: 273 ELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMELTESMFR 331

Query: 259 GVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKPDLRNPIIMHNVTEHFVH 308
            + E+      +S N         F R+   DAI++Y G D   + +      + +    
Sbjct: 332 YLAEKVCGSTKISYNGVEIDLGKPFARMTMIDAIKKYAGVDFDQVPDDAAAKKLADEHHI 391

Query: 309 SEFRVFSKILSVNPGYEVWA 328
                  K   VN  +E + 
Sbjct: 392 EYEERHKKGDIVNLFFEEYC 411



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 10/159 (6%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE--KKIDFAHNPFTMPQGGMESLKGN 472
            A   +A E  I      +   I++  F E+ E+E  +      +P  +    +   K +
Sbjct: 380 AAAKKLADEHHIEYEERHKKGDIVNLFFEEYCEKELIQPTFIMDHPIEISP--LTKKKPS 437

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRA 528
           D   +   +++L CN +E+ +     +      + F+    +    ++           A
Sbjct: 438 DPTKV--ERFELFCNTWEMCNAYSELNDPIDQRERFAAQDANAAAGDDEAEHTDEDFLNA 495

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + GMPP GGI  GIDR+VMLL  ++ +R+V LFP  ++
Sbjct: 496 LEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLFPTMKS 534


>gi|302380263|ref|ZP_07268735.1| lysine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302312046|gb|EFK94055.1| lysine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 630

 Score =  218 bits (554), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 20/298 (6%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           T    D      G  V+++G +   R HG + F+D++D  G  Q+    +    E    V
Sbjct: 37  TKEISDNFDEFDGKEVKIAGRIMSKRGHGKVNFMDLQDSLGRIQLFNKVNELGEENYAKV 96

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           ++  +  I G+      E       +G+I +  + + +LS + ++ LP          +R
Sbjct: 97  KNMDIGDIVGV------EGSIFKTHSGEISIRTKSVVLLSKSLQI-LPEKWHGLKDPDLR 149

Query: 126 FKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP 183
           ++ R++DL  +   K+  VKR+RII+++R  +    F+E  TPIL T +    AR F+  
Sbjct: 150 YRQRYVDLIMNPEIKDTFVKRSRIISAIREFLDTRGFLEVDTPILNTIAGGANARPFITH 209

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  A + Y + L+  GFD+ +++   FR+E       P E+  +++  ++
Sbjct: 210 HNTLDIDMY-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDHTHNP-EYTAIELYQAY 267

Query: 244 VEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRYGTDKPD 292
            + +D+++  E ++  V E+ +              +  + RI   DAI+ Y     D
Sbjct: 268 ADYNDMMDITEQLVAFVCEKVNGSMKSQFGETEIDFTPPWKRITMVDAIKEYADINFD 325



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 53/128 (41%), Gaps = 5/128 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   EEK +          +    + +  D       +++      EIA+     +   
Sbjct: 358 FEHFCEEKLVQPTFVLGHPVEVSPLAKRNPDDER-YTHRFEAFVCTKEIANAFSELNNPI 416

Query: 503 VMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F     ++E  ++           A + G+PP GG+  G+DR++M+L   +++R+
Sbjct: 417 DQKERFLKQVEARENGDDEAQMMDYDFLNALEVGLPPTGGLGIGVDRLIMMLTNNESIRD 476

Query: 559 VSLFPMSQ 566
           + LFP  +
Sbjct: 477 IMLFPTMK 484


>gi|291526765|emb|CBK92351.1| Lysyl-tRNA synthetase (class II) [Eubacterium rectale M104/1]
          Length = 537

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 66/320 (20%), Positives = 134/320 (41%), Gaps = 19/320 (5%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F +I+D  G  QV    D+   +     +   +  I G+   
Sbjct: 100 EVSIAGRMMFKRVMGKASFCNIQDLKGNIQVYVARDNIGEDSYADFKKSDIGDIYGV--- 156

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
              +       TG+I + A++I +LS + ++ LP           R++ R++DL  +   
Sbjct: 157 ---KGFAFRTKTGEISIHAEEITLLSKSLQI-LPEKFHGLTDTDTRYRQRYVDLIMNQES 212

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
           K   +KR++I+  +R  +   +F+E  TP+L +++   A                L  + 
Sbjct: 213 KEVFIKRSQILKEIRNFLAGRDFMEVETPMLVSNAGGAAARPFETHYNALNEDVKLRISL 272

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++   E++ R
Sbjct: 273 ELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMELTESMFR 331

Query: 259 GVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKPDLRNPIIMHNVTEHFVH 308
            + E+      +S N         F R+   DAI++Y G D   + +      + +    
Sbjct: 332 YLAEKVCGSTKISYNGVEIDLGKPFARMTMIDAIKKYAGVDFDQVPDDAAAKKLADEHHI 391

Query: 309 SEFRVFSKILSVNPGYEVWA 328
                  K   VN  +E + 
Sbjct: 392 EYEERHKKGDIVNLFFEEYC 411



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 10/159 (6%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE--KKIDFAHNPFTMPQGGMESLKGN 472
            A   +A E  I      +   I++  F E+ E+E  +      +P  +    +   K +
Sbjct: 380 AAAKKLADEHHIEYEERHKKGDIVNLFFEEYCEKELIQPTFIMDHPIEISP--LTKKKPS 437

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRA 528
           D   +   +++L CN +E+ +     +      + F+    +    ++           A
Sbjct: 438 DPTKV--ERFELFCNTWEMCNAYSELNDPIDQRERFAAQDANAAAGDDEAEHTDEDFLNA 495

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + GMPP GGI  GIDR+VMLL  ++ +R+V LFP  ++
Sbjct: 496 LEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLFPTMKS 534


>gi|148266976|ref|YP_001245919.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393023|ref|YP_001315698.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151220691|ref|YP_001331513.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|253730985|ref|ZP_04865150.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253735252|ref|ZP_04869417.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257424629|ref|ZP_05601057.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257427295|ref|ZP_05603696.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257429932|ref|ZP_05606318.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257432634|ref|ZP_05608996.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257435538|ref|ZP_05611588.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257794243|ref|ZP_05643222.1| lysyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258407240|ref|ZP_05680385.1| lysyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420792|ref|ZP_05683728.1| lysyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258429634|ref|ZP_05688308.1| lysyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258446096|ref|ZP_05694257.1| lysyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448004|ref|ZP_05696134.1| lysyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258452802|ref|ZP_05700797.1| lysyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258453850|ref|ZP_05701823.1| lysyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|282895125|ref|ZP_06303345.1| lysyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282903103|ref|ZP_06310995.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282904892|ref|ZP_06312752.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282907839|ref|ZP_06315677.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910155|ref|ZP_06317961.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913345|ref|ZP_06321136.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282915835|ref|ZP_06323603.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282918298|ref|ZP_06326038.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282923049|ref|ZP_06330735.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282925592|ref|ZP_06333245.1| lysyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|283768952|ref|ZP_06341861.1| lysyl-tRNA synthetase class II [Staphylococcus aureus subsp. aureus
           H19]
 gi|283957307|ref|ZP_06374765.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500394|ref|ZP_06666246.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293509333|ref|ZP_06668049.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293515921|ref|ZP_06670611.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|297591571|ref|ZP_06950208.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|304380535|ref|ZP_07363211.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|147740045|gb|ABQ48343.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149945475|gb|ABR51411.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150373491|dbj|BAF66751.1| lysyl-tRNA synthetase, class-2 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|253725297|gb|EES94026.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253726812|gb|EES95541.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257272656|gb|EEV04776.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257275946|gb|EEV07414.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257279448|gb|EEV10043.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257282499|gb|EEV12632.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257285175|gb|EEV15292.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257788215|gb|EEV26555.1| lysyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257841198|gb|EEV65647.1| lysyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843184|gb|EEV67597.1| lysyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257849693|gb|EEV73660.1| lysyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257855073|gb|EEV78015.1| lysyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858694|gb|EEV81567.1| lysyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257859488|gb|EEV82341.1| lysyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257864021|gb|EEV86776.1| lysyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|282314568|gb|EFB44955.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317864|gb|EFB48233.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282320326|gb|EFB50668.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282322816|gb|EFB53136.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282326003|gb|EFB56309.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328315|gb|EFB58590.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282332009|gb|EFB61518.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282592496|gb|EFB97508.1| lysyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282596529|gb|EFC01489.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282762543|gb|EFC02683.1| lysyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|283461133|gb|EFC08219.1| lysyl-tRNA synthetase class II [Staphylococcus aureus subsp. aureus
           H19]
 gi|283791231|gb|EFC30041.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290921329|gb|EFD98387.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096354|gb|EFE26614.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291467878|gb|EFF10388.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|297575440|gb|EFH94157.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|302750408|gb|ADL64585.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304340939|gb|EFM06863.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312436392|gb|ADQ75463.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|320139396|gb|EFW31274.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320144173|gb|EFW35941.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177]
          Length = 515

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 144/377 (38%), Gaps = 26/377 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D    +     +
Sbjct: 67  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 126

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +  I G+      E +     TG++ + A+K  +L+ +   PLP           R+
Sbjct: 127 NADLGDIVGV------EGVMFKTNTGELSVKAKKFTLLTKSLR-PLPDKFHGLQDIEQRY 179

Query: 127 KYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +    +  + R++II  MR  +  + F+E  TP++   +   A    V   
Sbjct: 180 RQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTHH 239

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 240 NALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYAD 298

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E+++R +  E      V  N   I  + A  R             + +  + 
Sbjct: 299 YHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTRLH-----------IVDAVKE 347

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
               +F             +   I  K       +   +NE+   + +  L    +    
Sbjct: 348 ATGVDFYEVKSDEEAKALAKEHGIEIK---DTMKYGHILNEFFEQKVEETLIQPTFIY-- 402

Query: 366 SGNVAGMGPVAKHLNIV 382
            G+   + P+AK     
Sbjct: 403 -GHPTEISPLAKKNPED 418



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
           +A+E GI   +  ++  I++  F+E   EE  I      F       +  L   +    +
Sbjct: 365 LAKEHGIEIKDTMKYGHILN-EFFEQKVEETLIQPT---FIYGHPTEISPLAKKNPEDPR 420

Query: 479 -AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGM 533
              +++L   G E A+     +        F    + K    +           A + GM
Sbjct: 421 FTDRFELFIVGREHANAFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDEDYIEALEYGM 480

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 481 PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQ 514


>gi|150402788|ref|YP_001330082.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|166225359|sp|A6VHK5|SYD_METM7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150033818|gb|ABR65931.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 438

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 96/323 (29%), Positives = 146/323 (45%), Gaps = 25/323 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH   ++     G  V L GWVH +R  G + F+ +RD  G  Q V      D   FEI
Sbjct: 9   RTHYSEEVIPEMDGQEVILMGWVHSIRALGKLAFVILRDREGTIQAVVPKQKVDEETFEI 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           AK +  E ++ I G V++      N     G  E+   +I +L+ A+  LPL    +   
Sbjct: 69  AKKLGKEDIIAIRGKVVA------NEKAPKG-FEVIPIEIRVLNKADAPLPLDPSEKVPA 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RFLD+RR  +      R+ ++ S+R     E F+E +TP L AS+ EG  + 
Sbjct: 122 EIDTRLDKRFLDIRRPKIQAIFKIRSEMLRSIRKTFADEGFVEVNTPKLVASATEGGTEL 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S   + +F  L Q+PQ YKQ++MA GFD+ F+IA  FR E+  + R   E   +D E
Sbjct: 182 FPISYFEKEAF--LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAVSIDTE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEF------------SNGNTVSNNFLRICYDDAIRRYGT 288
           MSFV + D +  +E V+   + +              N       F ++ Y +AI    +
Sbjct: 240 MSFVNEKDAMAMLEKVVYNCYADIEYNRPQEIELLELNWEIPEKTFDKLTYTEAIDIAIS 299

Query: 289 DKPDLRNPIIMHNVTEHFVHSEF 311
              ++     +    E  V  E 
Sbjct: 300 KGVEIEWGEDLSRAAERAVGDEM 322



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 31/175 (17%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D       +       +  A   +  E+G          +I ++P               
Sbjct: 295 DIAISKGVEIEWGEDLSRAAERAVGDEMG-------GLYFITEWP------------TQT 335

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
            PF            ND    KA  +DL+    EI+SG  R H  +++++  SN+G++  
Sbjct: 336 RPFYTLPHE------NDNKVCKA--FDLMYKELEISSGAQRVHKYDLLVENISNMGMNP- 386

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
              + F     AF+ GMPPH G   G DR  M+L    N+RE  LFP  +     
Sbjct: 387 ---DSFETYLEAFKFGMPPHAGWGLGADRFAMVLTAQDNIRECVLFPRDRQRLTP 438


>gi|326792441|ref|YP_004310262.1| lysyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326543205|gb|ADZ85064.1| Lysyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 509

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 71/332 (21%), Positives = 131/332 (39%), Gaps = 25/332 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +   R  G   F+ I+D  G  Q     D    E     +   +  I G+     
Sbjct: 74  SVAGRIMAKRDMGKASFITIQDQEGRIQSYVRKDELGDEDYADFKKYDIGDIVGI----- 128

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E        G+I + A+ + +LS + ++ LP          +R++ R++DL  +   K+
Sbjct: 129 -EGYIFRTQKGEISVRAKSVTLLSKSLQI-LPEKYHGLKDTEMRYRQRYVDLIVNPEVKD 186

Query: 142 IV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
              KR+ II SMR  +  ++FIE  TP+L + +    AR F+          Y +  AP+
Sbjct: 187 TFLKRSAIIRSMRNFLDNKDFIEVETPVLHSIAGGAAARPFVTHHNALDIDMY-MRIAPE 245

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+  GFDR ++I   FR+E       P EF  +++  +F + +D+++  E ++R 
Sbjct: 246 LKLKRLIVGGFDRVYEIGRVFRNEGMSIRHNP-EFTIMELYQAFADYNDMMDITEEMIRH 304

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           V +E +                A+  Y     DL  P    ++ +         F  I  
Sbjct: 305 VCKEVNG--------------TAVIEYDGVTIDLDKPFARISMVDAVKQYTGVDFRAIKD 350

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           +     +          +    D +N +    
Sbjct: 351 LEEARAIAKEKHVAFEEHHMKGDILNLFFEEF 382



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 11/132 (8%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   EE  I       +P  +           +       +++L   G E A+     
Sbjct: 378 FFEEFVEEHLIQPTFLTEHPVEISPLSKRKPLDPE----YTERFELFIVGREHANAFSEL 433

Query: 499 HMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +        F      +   ++           A + G+PP GG+  G+DR+VMLL  + 
Sbjct: 434 NDPIDQRGRFKRQEELRAAGDDEACEIDEDFLTALEYGLPPTGGLGVGVDRLVMLLTNSA 493

Query: 555 NVREVSLFPMSQ 566
           ++R+V LFP  +
Sbjct: 494 SIRDVLLFPTMK 505


>gi|242371652|ref|ZP_04817226.1| lysyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242350601|gb|EES42202.1| lysyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 495

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 146/377 (38%), Gaps = 26/377 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           +S  +L   +  S V ++G +   R  G   F  I+D  G  Q+    D    E     +
Sbjct: 47  YSKEELHEKEDESHVAIAGRLMTKRGKGKAGFAHIQDLSGQIQIYVRKDQVGEEQFDIWK 106

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G+      E +     TG+I + A+   +LS +   PLP           R+
Sbjct: 107 IADLGDIVGI------EGVMFKTNTGEISVKAKSFTLLSKSLR-PLPDKFHGLQDIEQRY 159

Query: 127 KYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +    +  + R++II  MR  +  + F+E  TP++   +   A    V   
Sbjct: 160 RQRYLDLITNEDSTRTFINRSKIIQEMRNYLNKQGFLEVETPMMHQIAGGAAARPFVTHH 219

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 220 NALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYAD 278

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E+++R + +E                  A  +Y  ++ DL +     ++ + 
Sbjct: 279 YHDIMDLTESMVRHIAQEVFG--------------SAKVQYNGEEIDLESSWRRLHIVDA 324

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
              +    F  + S      +          N  +   +NE+   + +  L    +    
Sbjct: 325 VKEATGVNFYDVQSDEEAVALAKEHGIEITENMKYGHILNEFFEQKVEETLIQPTFIY-- 382

Query: 366 SGNVAGMGPVAKHLNIV 382
            G+   + P+AK     
Sbjct: 383 -GHPIEISPLAKKNPED 398



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F       +  L   +    +   +++L   G E A+     +
Sbjct: 366 FFEQKVEETLIQPT---FIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELN 422

Query: 500 MSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F    + KE               A + GMPP GG+  GIDR+VMLL  + +
Sbjct: 423 DPIDQRERFEAQLVEKEQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPS 482

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  + 
Sbjct: 483 IRDVLLFPYMRQ 494


>gi|159905438|ref|YP_001549100.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|238686962|sp|A9A945|SYD_METM6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|159886931|gb|ABX01868.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 438

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 97/323 (30%), Positives = 146/323 (45%), Gaps = 25/323 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH   ++     G  V L GWVH +R  G + F+ +RD  G  Q V      D   FEI
Sbjct: 9   RTHYSEEVIPEMDGQEVILMGWVHSIRALGKLAFVILRDREGTIQAVVPKQKVDEETFEI 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           AK +  E ++ I G V++      N     G  E+   +I +L+ A+  LPL    +   
Sbjct: 69  AKKLGKEDIIAIRGKVVA------NEKAPKG-FEVIPIEIRVLNKADAPLPLDPSEKVPA 121

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RFLD+RR  +      R+ ++ S+R     E FIE +TP L AS+ EG  + 
Sbjct: 122 EIDTRLDKRFLDIRRPKIQAIFKIRSEMLRSIRKTFADEGFIEVNTPKLVASATEGGTEL 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S   + +F  L Q+PQ YKQ++MA GFD+ F+IA  FR E+  + R   E   +D E
Sbjct: 182 FPISYFEKEAF--LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAVSIDTE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEF------------SNGNTVSNNFLRICYDDAIRRYGT 288
           MSFV + D +  +E V+   + +              N       F ++ Y +AI    +
Sbjct: 240 MSFVNEKDAMAMLEKVVYNCYADIEYNRPQEIELLELNWEVPEKTFDKVTYTEAIDIAIS 299

Query: 289 DKPDLRNPIIMHNVTEHFVHSEF 311
              ++     +    E  V  E 
Sbjct: 300 KGVEIEWGEDLSRAAERAVGDEM 322



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 64/175 (36%), Gaps = 31/175 (17%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D       +       +  A   +  E+G          +I ++P               
Sbjct: 295 DIAISKGVEIEWGEDLSRAAERAVGDEMG-------GLYFITEWP------------TQT 335

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
            PF       ++             +DL+    EI+SG  R H  +++++  SN+G++  
Sbjct: 336 RPFYTLPHEKDAK--------VCKAFDLMYKELEISSGAQRVHKYDLLVENISNMGMNP- 386

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
              + F     AF+ GMPPH G   G DR  M+L    N+RE  LFP  +     
Sbjct: 387 ---DSFETYLEAFKFGMPPHAGWGLGADRFAMVLTAQDNIRECVLFPRDRQRLTP 438


>gi|291086958|ref|ZP_06345000.2| lysine--tRNA ligase [Clostridium sp. M62/1]
 gi|291076478|gb|EFE13842.1| lysine--tRNA ligase [Clostridium sp. M62/1]
          Length = 500

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 71/363 (19%), Positives = 135/363 (37%), Gaps = 25/363 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
               G  V L+G +   R  G   F +++D  G  Q     D    E  K  +   +  I
Sbjct: 57  EEMEGKEVSLAGRMMSKRVMGKASFCNLQDLQGNIQSYVARDDIGEEAYKDFKKLDIGDI 116

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+        +     TG+I + A+ +E+LS + ++ LP          +R++ R++DL
Sbjct: 117 IGI------RGVVFKTKTGEISIHAKSVELLSKSLQI-LPEKFHGLTNTDMRYRQRYVDL 169

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSF 191
             +   K+  +KR++I+  +R  +   NF+E  TP+L A++    AR F           
Sbjct: 170 IMNPEVKDTFIKRSQIVKEIRNFLDGRNFMEVETPVLVANAGGANARPFQTHFNALDED- 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  + + Y + L+  G +R ++I   FR+E   +   P EF  L++  +F   + ++ 
Sbjct: 229 VNLRISLELYLKRLIVGGMERVYEIGRVFRNEGTDTKHNP-EFTLLEVYQAFTNYEGMME 287

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E + R V  +      V               Y  +  DL  P     + +       
Sbjct: 288 LTETMFREVARKVLGTLQVE--------------YDGEIIDLEKPFARITMIDAVKQYSG 333

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
             F +I +                      D +N +     +  L    +  D   +++ 
Sbjct: 334 VDFREIHTDEEAKAAAREHNIQFEARHKKGDILNLFFEEYVEDKLVQPTFVTDHPVDISP 393

Query: 372 MGP 374
           +  
Sbjct: 394 LSK 396



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 55/162 (33%), Gaps = 30/162 (18%)

Query: 415 DARNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
           +AR+     L +     +     +  ++ D P               +P +  +      
Sbjct: 357 EARHKKGDILNLFFEEYVEDKLVQPTFVTDHP------------VDISPLSKRKPQDPEY 404

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
                      +++L     E A+     +      + F      K   ++         
Sbjct: 405 ---------TERFELYITRREFANAYSELNDPIDQRERFLAQEALKAAGDDEACSMDEDF 455

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             A   GMPP GG+  GIDR VMLL  +  +R+V LFP  ++
Sbjct: 456 INALMIGMPPTGGLGIGIDRFVMLLTNSYAIRDVLLFPTMKS 497


>gi|300857281|ref|YP_003782265.1| lysyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300437396|gb|ADK17163.1| lysyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 503

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 73/345 (21%), Positives = 141/345 (40%), Gaps = 23/345 (6%)

Query: 5   RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++     +  G  V ++G +   R HG   F D+ D YG  Q+    +    E 
Sbjct: 44  RTHTSKEVKDNYDTLEGKDVTVAGRLISKRVHGKAGFSDLYDRYGKIQLYIRINDVGEEK 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  +S  +    G ++S +         T +I +     E+++ + + PLP        
Sbjct: 104 LKEYKSYDI----GDILSVTGRVF--KTKTEEISIHITDFELVAKSLK-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
             +R++ R++DL  ++  ++   KRT II S+R  +  +++IE  TPIL++ +   A   
Sbjct: 157 PDLRYRQRYVDLIINSDVRDTFLKRTAIIKSIREFLDNKDYIEVETPILSSIAGGAAAKP 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                        L  A + Y + L+  GF++ ++I  CFR+E       P E+  +++ 
Sbjct: 217 FTTHHNALDIDMYLRIATELYLKRLIVGGFEKVYEIGKCFRNEGMDIRHNP-EYTSIELY 275

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            +F + +D++   EN++  V E+      V      I +               N I M 
Sbjct: 276 EAFADYNDMMEITENMIAYVCEKVLGTTKVVYEDTEIDFKPPW-----------NRITMV 324

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
              + F + +F             +   I  K    + +  D ++
Sbjct: 325 EAVKKFANVDFDEVKDDEEAREIAKGKHIELKKELKDCSKGDILD 369


>gi|14521164|ref|NP_126639.1| aspartyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|13878787|sp|Q9V036|SYD_PYRAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|5458382|emb|CAB49870.1| aspS aspartyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 438

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 98/412 (23%), Positives = 166/412 (40%), Gaps = 39/412 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RTH   ++     G  V+++GWV  V+  GGI F+ IRD  GI QV A       EI K 
Sbjct: 3   RTHYSSEITEELNGKKVKVAGWVQEVKDLGGIKFIWIRDREGIVQVTAPKKKVPQEIFKL 62

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFGEREY 120
              + SE V+ ++G+V                 E+  +K+E++S A+        G+ + 
Sbjct: 63  IPKLNSEDVIVVEGIVNFTPK-------AKLGFEIIPEKLEVISKAKTPLPLDPTGKVKA 115

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RF+DLR   +      R+ +  + R     E FIE  TP + A++ EG  + 
Sbjct: 116 ELDTRLDNRFMDLRNPRVMSIFKIRSSVFRATREFFYKEGFIEIHTPKIIATATEGGTEL 175

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                    +F A  Q+PQ YKQ++M++G D+ F+I P FR E+  + R   E + +D E
Sbjct: 176 FPLKYFENDAFLA--QSPQLYKQMMMSTGLDKVFEIGPIFRAEEHNTTRHLNEAWSIDAE 233

Query: 241 MSFVE-QDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAIRRYG 287
           M+F+E ++++++ +E ++  V       N                 F RI YD+A+    
Sbjct: 234 MAFIESEEEVMDLLERLILYVINYVRENNEKELKILEFELNEPKKPFPRITYDEALEILS 293

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
               ++          E       ++  K +  N G E++ I          +  +  + 
Sbjct: 294 DLGKEIPWG-------EDIDTEGEKLLGKYMLENEGAELYFIYRYPSEAKPFYIMKYEDK 346

Query: 348 ARSQGQPGLAYIFWRLDESGNVAGMGPV------AKHLNIVNTEAIRVRLDM 393
                   L Y    +   G       +       K LN  + E      + 
Sbjct: 347 PEVCKAFDLEYRGVEISSGGQREHRHDILVEQIREKGLNPESFEFYLRAFEY 398



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 12/118 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +      PF + +   +          KA  +DL   G EI+SGG R H  +++++    
Sbjct: 330 RYPSEAKPFYIMKYEDK------PEVCKA--FDLEYRGVEISSGGQREHRHDILVEQIRE 381

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G++       F    RAF+ GMPPHGG   G +R++M +L   N+REV LFP  +  
Sbjct: 382 KGLNP----ESFEFYLRAFEYGMPPHGGFGLGAERLIMRMLDIGNIREVILFPRDRRR 435


>gi|331002786|ref|ZP_08326300.1| hypothetical protein HMPREF0491_01162 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330413275|gb|EGG92643.1| hypothetical protein HMPREF0491_01162 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 647

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 66/293 (22%), Positives = 124/293 (42%), Gaps = 19/293 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
               G  V ++G +   R  G   F  ++D  G  Q     D+   +  K+ +   +  I
Sbjct: 54  EELDGKSVNIAGRLMSKRVMGKASFCHVQDLKGRIQAYVARDAVGEDEYKAFKKLDIGDI 113

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+              TG+I L A K+E+LS + + PLP           R++ R++DL
Sbjct: 114 VGI------TGDVFKTQTGEISLHATKVELLSKSLK-PLPEKFHGLTDTDTRYRQRYVDL 166

Query: 134 RRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +  +    +KR++II  +R  +  + F+E  TP+L +++   A               
Sbjct: 167 IMNEDVKDTFIKRSKIITEIRKFLDGQGFMEVETPMLVSNAGGAAARPFNTHFNALDEDV 226

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   +++ 
Sbjct: 227 KLRISLELYLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYHGMMDL 285

Query: 253 MENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY-GTDKPDLRN 295
            EN+ R + E      T+            F RI   DAI++Y G D  ++  
Sbjct: 286 TENMFRHLAEVVCGSTTIPYAEAMIDLGKPFERITMVDAIKKYSGIDFEEIET 338



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 9/132 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   E+K I      F M     +  L        +   +++L   G E+A+     +
Sbjct: 366 FFEEFVEDKLIQPT---FVMDHPIEVSPLTKKKPRDPRYVERFELFIYGREMANAYSELN 422

Query: 500 MSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F     +    +            A + GMPP GGI  GIDR+VMLL  +  
Sbjct: 423 DPIDQRERFLAQEEAFAAGDEEANHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTNSPA 482

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  ++
Sbjct: 483 IRDVLLFPTMKS 494


>gi|302332230|gb|ADL22423.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 495

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 145/377 (38%), Gaps = 26/377 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D    +     +
Sbjct: 47  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 106

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +  I G+      E +     TG++ + A+K  +L+ +   PLP           R+
Sbjct: 107 NADLGDIVGV------EGVMFKTNTGELSVKAKKFTLLTKSLR-PLPDKFHGLQDIEQRY 159

Query: 127 KYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +    +  + R++II  MR  +  + F+E  TP++   +   A    V   
Sbjct: 160 RQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTHH 219

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 220 NALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYAD 278

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E+++R +  E      V  N   I  + A  R             + +  + 
Sbjct: 279 YHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTRLH-----------IVDAVKE 327

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
               +F             + + I  K       +   +NE+   + +  L    +    
Sbjct: 328 ATGVDFYEVKSDEEAKALAKEYGIEIK---DTMKYGHILNEFFEQKVEETLIQPTFIY-- 382

Query: 366 SGNVAGMGPVAKHLNIV 382
            G+   + P+AK     
Sbjct: 383 -GHPTEISPLAKKNPED 398



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
           +A+E GI   +  ++  I++  F+E   EE  I      F       +  L   +    +
Sbjct: 345 LAKEYGIEIKDTMKYGHILN-EFFEQKVEETLIQPT---FIYGHPTEISPLAKKNPEDPR 400

Query: 479 -AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGM 533
              +++L   G E A+     +        F    + K    +           A + GM
Sbjct: 401 FTDRFELFIVGREHANAFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDEDYIEALEYGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 461 PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQ 494


>gi|73670622|ref|YP_306637.1| aspartyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|97196719|sp|Q466Y5|SYD_METBF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|72397784|gb|AAZ72057.1| aspartyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 444

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 98/350 (28%), Positives = 157/350 (44%), Gaps = 37/350 (10%)

Query: 5   RTHSCGDLGVSDV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYG---ITQVVANPDSACF 59
           RTH   D+    V  G  + L+GWVH VR  GGI F+ +RD  G   +T V    D   F
Sbjct: 7   RTHYTADVKPEKVDNGQKITLAGWVHEVRDLGGICFVVLRDREGKAQVTLVKKKIDKELF 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGER 118
           + A+ +  E V+ + G V                 EL  ++I +L+VA   LP+   G+ 
Sbjct: 67  DAARRLVRESVISVTGSVKFEEK-------APNGYELLPEEITVLNVANSPLPMDTTGKV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E     R   RF+DLRR         R + + + R   +   FIE +TP + A++ EG  
Sbjct: 120 EAELDTRLDSRFIDLRRAETTAVFKIRHQALQATREYFVQNGFIETATPKVVATATEGGT 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                +  ++ +F  L Q+PQ +KQ+LM+ GFDR F+I P FR E+  + R   E   +D
Sbjct: 180 ALFPITYFDREAF--LNQSPQLFKQILMSGGFDRVFEIGPIFRAEEHDTRRHLNEATSID 237

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAI--- 283
           +E+SF +  D++  +EN++  V+ +       S              FL++ Y++ I   
Sbjct: 238 VEVSFADHFDVMEILENLVAYVYAQVIEKCKPSLETLGIELKVPKTPFLKLTYNEVIEII 297

Query: 284 -------RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEV 326
                    +G D       I+ + V E    S + +      + P Y +
Sbjct: 298 NARSEEKMHWGDDLGTFGEHIVGNYVYETTGESHYFIIDWPTEIKPFYAM 347



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 34/198 (17%)

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN----------CFE 433
            E + + L +           + ++  +  ++ + H   +LG    +             
Sbjct: 271 LETLGIELKVPKTPFLKLTYNEVIEIINARSEEKMHWGDDLGTFGEHIVGNYVYETTGES 330

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             +I+D+P                PF                   +  +D++    E++S
Sbjct: 331 HYFIIDWP------------TEIKPFYAMPYED--------RPEYSKSFDMMHRTMELSS 370

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  R H+ +++     + G++       F    +AF+ GMPPH G   G +R +M +LG 
Sbjct: 371 GAQRIHIPDLLKSRIESQGLNP----EGFEFYLKAFEYGMPPHAGWGMGCERFIMTMLGT 426

Query: 554 KNVREVSLFPMSQNFCDL 571
           +N+R+  LFP  +     
Sbjct: 427 ENIRDTVLFPRDRRRLSP 444


>gi|168830126|gb|ACA34354.1| lysyl-tRNA synthetase [Paenibacillus polymyxa]
          Length = 506

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 69/383 (18%), Positives = 145/383 (37%), Gaps = 28/383 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           + +Y + +  +L   ++   V ++G +   R  G   F  I+D  G  Q+    D+    
Sbjct: 53  LSKYDSLTKEELEEKNI--EVSIAGRIMAKRVMGKASFAHIQDLSGRIQIYVRQDTVPES 110

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K+     +  I G+      + +     TG+  +    IE+LS +   PLP       
Sbjct: 111 KYKAFGILDLGDIVGV------KGVLFKTKTGETTIKVLDIEVLSKSL-YPLPEKYHGLK 163

Query: 121 PESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
              +R++ R++DL     + K  + R+RII SMR  + +  ++E  TP L + +   A  
Sbjct: 164 DVELRYRQRYVDLVMNPEVQKTFITRSRIIQSMRRYLDSLGYLEVETPTLHSIAGGAAAK 223

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
             V           +  A + + + L+  G ++ ++I   +R+E   +   P EF  +++
Sbjct: 224 PFVTHHNALDMQLYMRIAIELHLKRLIVGGMEKVYEIGRVYRNEGISTRHNP-EFTMIEL 282

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  DI+   EN++  + +E      +      +      RR           + M
Sbjct: 283 YEAYADYKDIMQLTENMVAHIAQEVLGTQHIQYQGQEVDLTPQWRR-----------VSM 331

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +  +     +   FS  +S    + +          +  F   +N +     +  L   
Sbjct: 332 VDAVKEVTGVD---FSVQMSNEEAHRLAKEHKVSVEPHMTFGHILNAFFEQFVEETLIQP 388

Query: 360 FWRLDESGNVAGMGPVAKHLNIV 382
            +     G+   + P+AK     
Sbjct: 389 TFIT---GHPVEISPLAKKNEQD 408



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 11/133 (8%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   EE  I       +P  +    +      D       +++L     E A+     
Sbjct: 376 FFEQFVEETLIQPTFITGHPVEISP--LAKKNEQDPR--FTDRFELFVVAREHANAFTEL 431

Query: 499 HMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      Q F    + +E              RA + GMPP GG+  GIDR+VMLL  A 
Sbjct: 432 NDPIDQRQRFEAQLLEREHGNDEAHEMDDDFIRALEYGMPPTGGLGIGIDRLVMLLTDAP 491

Query: 555 NVREVSLFPMSQN 567
           ++R+V LFP  +N
Sbjct: 492 SIRDVLLFPHMRN 504


>gi|308066909|ref|YP_003868514.1| lysyl-tRNA synthetase (lysine--tRNA ligase) [Paenibacillus polymyxa
           E681]
 gi|305856188|gb|ADM67976.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) [Paenibacillus polymyxa
           E681]
          Length = 506

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 70/384 (18%), Positives = 148/384 (38%), Gaps = 30/384 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           + +Y + +  +L   ++   V ++G +   R  G   F  I+D  G  Q+    D+    
Sbjct: 53  LSKYDSLTKEELEEKNI--EVSIAGRIMAKRVMGKASFAHIQDLSGRIQIYVRQDTVPES 110

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K+     +  I G+      + +     TG+  +    IE+LS +   PLP       
Sbjct: 111 KYKAFGILDLGDIVGV------KGVLFKTKTGETTIKVLDIEVLSKSL-YPLPEKYHGLK 163

Query: 121 PESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR- 178
              +R++ R++DL     + K  + R+RII SMR  + +  ++E  TP L + +   A  
Sbjct: 164 DVELRYRQRYVDLVMNPEVQKTFITRSRIIQSMRRYLDSLGYLEVETPTLHSIAGGAAAK 223

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+          Y +  A + + + L+  G ++ ++I   +R+E   +   P EF  ++
Sbjct: 224 PFITHHNALDMQLY-MRIAIELHLKRLIVGGMEKVYEIGRVYRNEGISTRHNP-EFTMIE 281

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +  ++ +  DI+   EN++  + +E      +      +      RR           + 
Sbjct: 282 LYEAYADYKDIMQLTENMVAHIAQEVLGTQHIQYQGQEVDLTPQWRR-----------VS 330

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M +  +     +F V       +   +   +P +    +  F   +N +     +  L  
Sbjct: 331 MVDAVKEVTGVDFSVQMSNEEAHRLAKEHKVPVE---PHMTFGHILNAFFEQFVEETLIQ 387

Query: 359 IFWRLDESGNVAGMGPVAKHLNIV 382
             +     G+   + P+AK     
Sbjct: 388 PTFIT---GHPVEISPLAKKNEQD 408



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 11/133 (8%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   EE  I       +P  +    +      D       +++L     E A+     
Sbjct: 376 FFEQFVEETLIQPTFITGHPVEISP--LAKKNEQDPR--FTDRFELFVVAREHANAFTEL 431

Query: 499 HMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      Q F    + +E              RA + GMPP GG+  GIDR+VMLL  A 
Sbjct: 432 NDPIDQRQRFEAQLLEREHGNDEAHEMDDDFIRALEYGMPPTGGLGIGIDRLVMLLTDAP 491

Query: 555 NVREVSLFPMSQN 567
           ++R+V LFP  +N
Sbjct: 492 SIRDVLLFPHMRN 504


>gi|25029089|ref|NP_739143.1| lysyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|23494376|dbj|BAC19343.1| putative lysyl-tRNA synthetase [Corynebacterium efficiens YS-314]
          Length = 536

 Score =  217 bits (553), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 103/584 (17%), Positives = 187/584 (32%), Gaps = 136/584 (23%)

Query: 5   RTHSCGDLGVSDV------------------GSFVRLSGWVHRVRPHGGIIFLDIRDHYG 46
           RT S  DL    V                     V ++G V  +R  G + F  I++  G
Sbjct: 56  RTISITDLREKYVVGEGDAEGVTYLAAGDETDDTVAIAGRVMFIRNTGKLCFAVIQEGNG 115

Query: 47  ITQVVANPDSACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILS 105
            T        +   + +   + W   +D G ++S     I +    G++ + A    + S
Sbjct: 116 TT---VQAMLSLAAVGEEALAGWKADVDLGDIVSVRGRVIASK--RGELSVMADSWHMAS 170

Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIEC 164
            +       F   +  E  R ++R+ DL      + N + R +++ ++R  +  E+F+E 
Sbjct: 171 KSLRPLPVAFA--DMSEDTRVRHRYTDLIMREQARTNALTRIKVMRALRKYLEGEDFLEV 228

Query: 165 STPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP+L        AR F+  S       Y L  AP+ + +  +  G +R F++   FR+E
Sbjct: 229 ETPMLQTLHGGAAARPFVTHSNAFDLDLY-LRIAPELFLKRCVVGGMERVFEVNRNFRNE 287

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
              S   P EF  L+   ++   +     ++ +++ V +E                    
Sbjct: 288 GADSTHSP-EFSMLETYQAWGTYETGARLIQGLVQFVAQEVFGTT--------------- 331

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
                        + + + T + +  E++      S+N                R F  +
Sbjct: 332 ------------EVTLADGTTYDLGGEWKTIEMYPSLNE------------ALQRKFPGQ 367

Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403
                 S                             ++     I   + +          
Sbjct: 368 PEVTVES-----------------------------SVEELREIAAVIGLAV-------- 390

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463
             P K           I  EL +     +   ++ DFP               +P T   
Sbjct: 391 --PEKGGWGHGKLVEEI-WEL-LCEDQLYGPIFVKDFP------------VETSPLTRQH 434

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF- 522
                            ++DL   GFE+A+G        +  + F +        ++   
Sbjct: 435 RD---------KPGVTEKWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAM 485

Query: 523 ---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                   A + GMPP  G   GIDR++M L G   +RE  LFP
Sbjct: 486 VLDEDFLAAMEQGMPPTAGCGMGIDRLLMALTGLG-IRETVLFP 528


>gi|239626630|ref|ZP_04669661.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239516776|gb|EEQ56642.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 647

 Score =  217 bits (553), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 68/335 (20%), Positives = 133/335 (39%), Gaps = 23/335 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G    ++G +   R  G   F +I+D  G  QV    DS   E  K  +   +  + G+ 
Sbjct: 59  GKEAAIAGRMMFKRVMGKASFCNIQDLKGNIQVYVARDSVGEEPYKDFKKMDIGDVVGV- 117

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
                        TG+I + A ++ +LS + +  LP          +R++ R++DL  + 
Sbjct: 118 -----RGTVFTTKTGEISIHATEVTLLSKSLQ-VLPEKFHGLTDTDMRYRQRYVDLIMNA 171

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +    +KR+RI+ ++R  +  E F+E  TP+L A++   A                L  
Sbjct: 172 EVKDTFIKRSRILAAIRKYLGGEGFMEVETPMLVANAGGAAARPFETHFNALDEDLKLRI 231

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   +++  EN+
Sbjct: 232 SLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYHGMMDLTENL 290

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
            R V +E     T++ N +++              DL  P     + +         FS+
Sbjct: 291 YRFVAQEVLGTTTITYNGIQM--------------DLGRPFERITMVDAVKKYSGVDFSQ 336

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           I ++               G     D +N +    
Sbjct: 337 IHTLEEARAAAREKHVEFEGRHKKGDILNLFFEEF 371



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 69/201 (34%), Gaps = 40/201 (19%)

Query: 417 RNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           R+     L +     +  +  +  ++MD P               +P T  +        
Sbjct: 357 RHKKGDILNLFFEEFVEAHLVQPTFVMDHP------------IEISPLTKKKPEDPEY-- 402

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYR 527
                    +++   NG+E+A+     +      + F          +            
Sbjct: 403 -------VERFEFFMNGWEMANAYSELNDPIDQRERFKAQEELLAQGDEEANHTDEDFIN 455

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP--MSQNFCDLLMGSPSTVSVEQLR 585
           A + GMPP GGI  GIDR+ MLL  +  +R+V LFP   +    D    +P        +
Sbjct: 456 ALEVGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLFPTMKTLGGSD----APKKAE----K 507

Query: 586 ELGLRIVENPKKILKISVTTI 606
            +G  +    K  ++I  + +
Sbjct: 508 PVGKSVDAEEKAEVEIDFSNV 528


>gi|229829706|ref|ZP_04455775.1| hypothetical protein GCWU000342_01803 [Shuttleworthia satelles DSM
           14600]
 gi|229791695|gb|EEP27809.1| hypothetical protein GCWU000342_01803 [Shuttleworthia satelles DSM
           14600]
          Length = 648

 Score =  217 bits (553), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 69/346 (19%), Positives = 136/346 (39%), Gaps = 26/346 (7%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   D+        G  V+++G +   R  G   F +IRD  G  Q+    D    E  
Sbjct: 40  THHSVDIREHFEELEGKEVKIAGRMMFKRVMGKASFANIRDLKGDMQIYVTRDDLGQEDY 99

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              +   V  I G+V       +      G+I + A ++ +LS + + PLP         
Sbjct: 100 ALFKKYDVGDILGVV------GVVFRTRMGEISVHASQVTLLSKSLQ-PLPEKFHGLTDT 152

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             R++ R++DL  +   K+  VKR++II  +R  +   +F+E  TP+L +++   A    
Sbjct: 153 DTRYRQRYVDLIMNPEVKDTFVKRSQIIKEIRNFLDGRDFMEVETPMLVSNAGGAAARPF 212

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 213 ESHYNALDEDVKLRISLELYLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTLMELYQ 271

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ + + ++   E++ R + E+            RI        Y   + DL  P     
Sbjct: 272 AYTDYNGMMELTESMFRYLAEKVCGST-------RIT-------YQGTEIDLGKPFCRLT 317

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
           + +         F ++ ++    ++          +    D +N +
Sbjct: 318 MIDAIREKTGIDFDQVKTLEEARKLADEHHIAYEPHHKRGDIINLF 363



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 13/130 (10%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES----LKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           F+E N EE  I      F M      S        D   +   +++L   G E+ +    
Sbjct: 363 FFEENCEESLIQPT---FIMDHPVEISPLTKKSTKDPSKV--ERFELYIYGREMCNAYSE 417

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
            +      + F+         +            A + GMPP GGI  GIDR+VMLL  +
Sbjct: 418 LNDPIDQRERFAEQDALAAAGDEEANHTDEDFLNAMEIGMPPTGGIGYGIDRLVMLLTDS 477

Query: 554 KNVREVSLFP 563
             +R+V LFP
Sbjct: 478 PAIRDVLLFP 487


>gi|58699434|ref|ZP_00374182.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534048|gb|EAL58299.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 257

 Score =  217 bits (553), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 129/233 (55%), Positives = 166/233 (71%), Gaps = 2/233 (0%)

Query: 93  QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSM 152
           ++E    + EI      +   + GE+EYPE++RFKYRFLDLRR+ +  NI+ R++II  +
Sbjct: 18  EVEFHFDE-EIAKEERSILASITGEQEYPENMRFKYRFLDLRREKVRNNIILRSQIIAEL 76

Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
           R  MI   F+E  TPILTASSPEGARD+LVPSR+N G FYALPQAPQ +KQLLM SGFD+
Sbjct: 77  RKLMIERGFLEIQTPILTASSPEGARDYLVPSRLNPGKFYALPQAPQIFKQLLMVSGFDK 136

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN 272
           YFQIAPCFRDED R+DR PGEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  
Sbjct: 137 YFQIAPCFRDEDARADRSPGEFYQLDLEMSFVTQEDIFQIIESTLYRVFAKFS-RKSVDK 195

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
           +F RI Y +A+ +YG+DKPDLRNP+++ +VTE F  S F +F   +       
Sbjct: 196 DFPRITYKEAMLKYGSDKPDLRNPLLISDVTEIFRDSGFNIFKSNIERGMVVR 248


>gi|15896444|ref|NP_349793.1| lysyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|39932231|sp|Q97EB7|SYK_CLOAB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|15026267|gb|AAK81133.1|AE007815_3 Lysyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510602|gb|ADZ22238.1| lysyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 515

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 72/357 (20%), Positives = 145/357 (40%), Gaps = 25/357 (7%)

Query: 5   RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+   +           V ++G +   R HG   F DI D YG  Q+    D    E 
Sbjct: 55  RTHTSKQIVDNYDELEDKIVTVAGRLMSKRVHGKAGFSDIYDRYGKIQLYLKIDDVGEEK 114

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  ++  +    G  +  + +       TG+I L   K+E+++ + + PLP        
Sbjct: 115 LKEFKTFDI----GDFVVITGKVF--KTKTGEITLHVTKLELIAKSLK-PLPEKFHGLKD 167

Query: 122 ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
             ++++ R++DL  +  + +  +KRT II ++R  +  ++++E  TP+L T +S   AR 
Sbjct: 168 PDLKYRQRYVDLIINQDVRETFMKRTAIIKAVREFLDNKDYLEVETPVLSTIASGASARP 227

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           + L  A + Y + L+  GF++ ++I   FR+E       P EF  +++
Sbjct: 228 FSTHHNALDLDMH-LRIATELYLKRLIVGGFEKVYEIGKDFRNEGIDVRHNP-EFTMIEL 285

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D++   EN++    ++ +    ++     I      RR           + M
Sbjct: 286 YEAYADYNDMMEITENMVAYACQKVNGTTKITYEGTEIDLTPPWRR-----------VTM 334

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
            ++ +     +F             +   +  K    +    D +N      G+  L
Sbjct: 335 VDIVKEHSGIDFSTVKTDEEAREIAKEKKLELKKELKDCTKGDILNALFEEYGEKKL 391


>gi|256066157|ref|XP_002570486.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|227299150|emb|CAY18004.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 450

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 99/364 (27%), Positives = 150/364 (41%), Gaps = 36/364 (9%)

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEF---SNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           +LD+EM+F+   DI   +EN+L  ++           +S  FLR+ Y DA+ RYG+DKPD
Sbjct: 119 KLDIEMAFITPYDIYEIIENMLLYIWPTVQSTLGCQPISTPFLRMEYCDAMSRYGSDKPD 178

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
           +R   +  + +    H+ F +  K +SV   +  + +  K    N               
Sbjct: 179 VRFGFLF-SYSAVDGHTGFNIPRKYVSVFLRFFTFEVLIKPIFQNIK------------- 224

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L  +     E G++             NTE           D         +    F
Sbjct: 225 SKQLDLLNVLKPECGDLV-------FFTKGNTE--IELTIAFQTDCPCLWFQAKITILLF 275

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
           +     HI + L I     F F WI  FP +E N    +    H+PFT            
Sbjct: 276 S----VHI-KGLSIYEPG-FHFLWINQFPLFEKNNL-GQWKSVHHPFTAASPETAHFLYT 328

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D   +    +DLVCNG E+  G IR H  EV    F+ +          F     A   G
Sbjct: 329 DPSKVIGLHHDLVCNGQEVGGGSIRVHNPEVQKYIFTEILKENSCEMEYF---LTALNSG 385

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIV 592
            PPHGGIA G+DR++ + + AK++R+V  FP +    DLL G+P+ V  E L +  + + 
Sbjct: 386 APPHGGIALGLDRLIAIFVNAKSIRDVIAFPKAPGGKDLLCGTPTMVDDEILSQYCISVS 445

Query: 593 ENPK 596
            + K
Sbjct: 446 NHNK 449



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y++H+CG++    + S V + GW+   R      F+ +RD  GI Q+  + +S       
Sbjct: 41  YKSHACGEVNTQYINSTVTVCGWLEHCRLSSR--FVVLRDDRGIIQIYCDKNSL---QIP 95

Query: 64  SVRSEWVLCIDGLVMSRSAETIN 86
              SE VL + G V +R  + +N
Sbjct: 96  QFNSESVLRVTGKVQARPEKDVN 118


>gi|167745533|ref|ZP_02417660.1| hypothetical protein ANACAC_00224 [Anaerostipes caccae DSM 14662]
 gi|167655254|gb|EDR99383.1| hypothetical protein ANACAC_00224 [Anaerostipes caccae DSM 14662]
          Length = 637

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 143/377 (37%), Gaps = 29/377 (7%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   ++        G  V ++G +   R  G   F +I+D  G  Q     D    E  
Sbjct: 38  THHSMEIKDHFEELEGKEVSVAGRMMFKRVMGKASFCNIQDLEGRIQAYVARDEIGVEEY 97

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  +   +  I G+      +       TG+  + A+++ +LS + + PLP         
Sbjct: 98  KDFKKMDIGDIIGI------KGTVFVTKTGEKSIHAKEVVLLSKSLK-PLPEKFHGLKDT 150

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             R++ R++DL  +   K   +KR++II+ +R  +  + F+E  TP+L  ++   A    
Sbjct: 151 DARYRQRYVDLIMNEESKGTFIKRSKIISKIRSFLDGQGFMEVETPMLVPNAGGAAARPF 210

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  + + Y + L+  G ++ ++I   FR+E   +   P EF  +++  
Sbjct: 211 ETHYNALDEDVKLRISLELYLKRLIVGGLEKVYEIGRVFRNEGVDTRHNP-EFTLMELYQ 269

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ + + ++   EN+ R + +E     T++ N + +              DL  P     
Sbjct: 270 AYTDYNGMMELTENLYRYLAQEVVGSTTITYNGIEM--------------DLGKPFEKIT 315

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           + +         F +I +V    +                D +N +     +  L    +
Sbjct: 316 MVDAVKKYAGVDFDEIHTVEDARKAADEHHVEYEERHKKGDILNLFFEEFVEDKLVQPTF 375

Query: 362 RLDESGNVAGMGPVAKH 378
            LD    +    P+ K 
Sbjct: 376 VLDHPVEI---SPLTKK 389



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 30/160 (18%)

Query: 417 RNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           R+     L +     +     +  +++D P               +P T  +        
Sbjct: 351 RHKKGDILNLFFEEFVEDKLVQPTFVLDHP------------VEISPLTKKKPENPDY-- 396

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYR 527
                    +++   NG+E+A+     +      + F          +            
Sbjct: 397 -------VERFEFFMNGWEMANAYSELNDPIDQRERFKAQEELLAQGDEEANSTDEDFLN 449

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++
Sbjct: 450 ALEIGMPPTGGIGFGIDRMVMLLTDSSAIRDVLLFPTMKS 489


>gi|21282201|ref|NP_645289.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49485381|ref|YP_042602.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|38258393|sp|Q8NXZ0|SYK_STAAW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|56749397|sp|Q6GBX1|SYK_STAAS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|21203637|dbj|BAB94337.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49243824|emb|CAG42249.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476]
          Length = 495

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 144/377 (38%), Gaps = 26/377 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D    +     +
Sbjct: 47  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 106

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +  I G+      E +     TG++ + A+K  +L+ +   PLP           R+
Sbjct: 107 NADLGDIVGV------EGVMFKTNTGELSVKAKKFTLLTKSLR-PLPDKFHGLQDIEQRY 159

Query: 127 KYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +    +  + R++II  MR  +  + F+E  TP++   +   A    V   
Sbjct: 160 RQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTHH 219

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 220 NALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYAD 278

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E+++R +  E      V  N   I  + A  R             + +  + 
Sbjct: 279 YHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTRLH-----------IVDAVKE 327

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
               +F             +   I  K       +   +NE+   + +  L    +    
Sbjct: 328 ATGVDFYEVKSDDEAKALAKEHGIEIK---DTMKYGHILNEFFEQKVEETLIQPTFIY-- 382

Query: 366 SGNVAGMGPVAKHLNIV 382
            G+   + P+AK     
Sbjct: 383 -GHPTEISPLAKKNPED 398



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
           +A+E GI   +  ++  I++  F+E   EE  I      F       +  L   +    +
Sbjct: 345 LAKEHGIEIKDTMKYGHILN-EFFEQKVEETLIQPT---FIYGHPTEISPLAKKNPEDPR 400

Query: 479 -AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGM 533
              +++L   G E A+     +        F    + K    +           A + GM
Sbjct: 401 FTDRFELFIVGREHANAFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDEDYIEALEYGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 461 PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQ 494


>gi|160895077|ref|ZP_02075851.1| hypothetical protein CLOL250_02627 [Clostridium sp. L2-50]
 gi|156863508|gb|EDO56939.1| hypothetical protein CLOL250_02627 [Clostridium sp. L2-50]
          Length = 539

 Score =  217 bits (552), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 64/319 (20%), Positives = 135/319 (42%), Gaps = 19/319 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +I+D  G  QV    D    E     +   +  I G+    
Sbjct: 101 VSIAGRMMFKRVMGKASFCNIQDLKGNIQVYVARDQIGEEAYADFKKSDIGDIYGV---- 156

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH- 139
             +       TG++ + A+++ +LS + ++ LP          +R++ R++DL  +    
Sbjct: 157 --KGWAFRTKTGELSIHAEEMTLLSKSLQI-LPEKFHGLTDTDVRYRQRYVDLIMNQESK 213

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
              +KR++I+  +R  +   +F+E  TP+L A++   A                L  + +
Sbjct: 214 AVFIKRSQILKEIRNFLADRDFMEVETPMLVANAGGAAARPFETHYNALNEDVKLRISLE 273

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++   E++ R 
Sbjct: 274 LYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMELTESMFRY 332

Query: 260 VFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKPDLRNPIIMHNVTEHFVHS 309
           + E+      +S N         F R+  +DAI++Y G D   + +      + +    +
Sbjct: 333 LAEKVCGSTKISYNGIEIDFGKPFERLTMNDAIKKYTGIDFDQVEDDAAAKKLADEHNIA 392

Query: 310 EFRVFSKILSVNPGYEVWA 328
                 K   +N  +E + 
Sbjct: 393 YEERHKKGDIINLFFEEFC 411



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 14/161 (8%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES----LK 470
            A   +A E  I      +   I++  F+E   EEK I      F M      S     K
Sbjct: 380 AAAKKLADEHNIAYEERHKKGDIINL-FFEEFCEEKLIQPT---FIMDHPIEISPLTKKK 435

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LY 526
            +D   +   +++L  N +E+ +     +      + F+    +    ++          
Sbjct: 436 PSDPSKV--ERFELFINTWEMCNAYSELNDPIDQRERFAAQDANAAAGDDEAEHTDEDFL 493

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            A + GMPP GGI  GIDR+VMLL  ++ +R+V LFP  ++
Sbjct: 494 NALEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLFPTMKS 534


>gi|15923507|ref|NP_371041.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15926194|ref|NP_373727.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|57651394|ref|YP_185450.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|82750224|ref|YP_415965.1| lysyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87161440|ref|YP_493205.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194278|ref|YP_499070.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|156978845|ref|YP_001441104.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|221142291|ref|ZP_03566784.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253315214|ref|ZP_04838427.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|255005310|ref|ZP_05143911.2| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|262050002|ref|ZP_06022861.1| lysyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262052543|ref|ZP_06024740.1| lysyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269202138|ref|YP_003281407.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|284023526|ref|ZP_06377924.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294850378|ref|ZP_06791111.1| lysyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295407408|ref|ZP_06817205.1| lysyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296276170|ref|ZP_06858677.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297246488|ref|ZP_06930328.1| lysyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|54039675|sp|P67610|SYK_STAAN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|54042058|sp|P67609|SYK_STAAM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71153565|sp|Q5HIF7|SYK_STAAC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123098061|sp|Q2G0Q3|SYK_STAA8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123727449|sp|Q2YVW8|SYK_STAAB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123749646|sp|Q2FJC3|SYK_STAA3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166230591|sp|A7WYS8|SYK_STAA1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|13700407|dbj|BAB41705.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14246285|dbj|BAB56679.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|57285580|gb|AAW37674.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|82655755|emb|CAI80154.1| lysyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87127414|gb|ABD21928.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201836|gb|ABD29646.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|156720980|dbj|BAF77397.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|259159590|gb|EEW44637.1| lysyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259161937|gb|EEW46520.1| lysyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262074428|gb|ACY10401.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269940088|emb|CBI48464.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|283469809|emb|CAQ49020.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
 gi|285816216|gb|ADC36703.1| Lysyl-tRNA synthetase (class II) [Staphylococcus aureus 04-02981]
 gi|294822802|gb|EFG39238.1| lysyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294967765|gb|EFG43797.1| lysyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297176675|gb|EFH35937.1| lysyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|312829012|emb|CBX33854.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315128646|gb|EFT84649.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315193880|gb|EFU24274.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
 gi|315196201|gb|EFU26557.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
 gi|329313236|gb|AEB87649.1| Lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329725054|gb|EGG61549.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
 gi|329729791|gb|EGG66188.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
 gi|329731092|gb|EGG67464.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 495

 Score =  217 bits (552), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 144/377 (38%), Gaps = 26/377 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D    +     +
Sbjct: 47  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 106

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +  I G+      E +     TG++ + A+K  +L+ +   PLP           R+
Sbjct: 107 NADLGDIVGV------EGVMFKTNTGELSVKAKKFTLLTKSLR-PLPDKFHGLQDIEQRY 159

Query: 127 KYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +    +  + R++II  MR  +  + F+E  TP++   +   A    V   
Sbjct: 160 RQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTHH 219

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 220 NALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYAD 278

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E+++R +  E      V  N   I  + A  R             + +  + 
Sbjct: 279 YHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTRLH-----------IVDAVKE 327

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
               +F             +   I  K       +   +NE+   + +  L    +    
Sbjct: 328 ATGVDFYEVKSDEEAKALAKEHGIEIK---DTMKYGHILNEFFEQKVEETLIQPTFIY-- 382

Query: 366 SGNVAGMGPVAKHLNIV 382
            G+   + P+AK     
Sbjct: 383 -GHPTEISPLAKKNPED 398



 Score = 90.9 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
           +A+E GI   +  ++  I++  F+E   EE  I      F       +  L   +    +
Sbjct: 345 LAKEHGIEIKDTMKYGHILN-EFFEQKVEETLIQPT---FIYGHPTEISPLAKKNPEDPR 400

Query: 479 -AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGM 533
              +++L   G E A+     +        F    + K    +           A + GM
Sbjct: 401 FTDRFELFIVGREHANAFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDEDYIEALEYGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 461 PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQ 494


>gi|323438751|gb|EGA96491.1| lysyl-tRNA synthetase [Staphylococcus aureus O11]
          Length = 495

 Score =  217 bits (552), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 144/377 (38%), Gaps = 26/377 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D    +     +
Sbjct: 47  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 106

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +  I G+      E +     TG++ + A+K  +L+ +   PLP           R+
Sbjct: 107 NADLGDIVGV------EGVMFKTNTGELSVKAKKFTLLTKSLR-PLPDKFHGLQDIEQRY 159

Query: 127 KYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +    +  + R++II  MR  +  + F+E  TP++   +   A    V   
Sbjct: 160 RQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTHH 219

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 220 NALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYAD 278

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E+++R +  E      V  N   I  + A  R             + +  + 
Sbjct: 279 YHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTRLH-----------IVDAVKE 327

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
               +F             +   I  K       +   +NE+   + +  L    +    
Sbjct: 328 ATGVDFYEVKSDEEAKALAKEHGIEIK---DTMKYGHILNEFFEQKVEETLIQPTFIY-- 382

Query: 366 SGNVAGMGPVAKHLNIV 382
            G+   + P+AK     
Sbjct: 383 -GHPTEISPLAKKNPED 398



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
           +A+E GI   +  ++  I++  F+E   EE  I      F       +  L   +    +
Sbjct: 345 LAKEHGIEIKDTMKYGHILN-EFFEQKVEETLIQPT---FIYGHPTEISPLAKKNPEDTR 400

Query: 479 -AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGM 533
              +++L   G E A+     +        F    + K    +           A + GM
Sbjct: 401 FTDRFELFIVGREHANAFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDEDYIEALEYGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 461 PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQ 494


>gi|298693848|gb|ADI97070.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 495

 Score =  217 bits (552), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 144/377 (38%), Gaps = 26/377 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D    +     +
Sbjct: 47  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 106

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +  I G+      E +     TG++ + A+K  +L+ +   PLP           R+
Sbjct: 107 NADLGDIVGV------EGVMFKTNTGELSVKAKKFTLLTKSLR-PLPDKFHGLQDIEQRY 159

Query: 127 KYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +    +  + R++II  MR  +  + F+E  TP++   +   A    V   
Sbjct: 160 RQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTHH 219

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 220 NALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYAD 278

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E+++R +  E      V  N   I  + A  R             + +  + 
Sbjct: 279 YHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTRLH-----------IVDAVKE 327

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
               +F             +   I  K       +   +NE+   + +  L    +    
Sbjct: 328 ATGVDFYEVKSDEEAKALAKEHGIEIK---DTMKYGHILNEFFEQKVEETLIQPTFIY-- 382

Query: 366 SGNVAGMGPVAKHLNIV 382
            G+   + P+AK     
Sbjct: 383 -GHPTEISPLAKKNPED 398



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
           +A+E GI   +  ++  I++  F+E   EE  I      F       +  L   +    +
Sbjct: 345 LAKEHGIEIKDTMKYGHILN-EFFEQKVEETLIQPT---FIYGHPTEISPLAKKNPEDPR 400

Query: 479 -AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGM 533
              +++L   G E A+     +        F    + K    +           A + GM
Sbjct: 401 FTDRFELFIVGREHANAFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDEDYIEALEYGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 461 PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQ 494


>gi|49482744|ref|YP_039968.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|295427052|ref|ZP_06819689.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|56749426|sp|Q6GJF4|SYK_STAAR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|49240873|emb|CAG39540.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|295129055|gb|EFG58684.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16]
          Length = 495

 Score =  217 bits (552), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 144/377 (38%), Gaps = 26/377 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D    +     +
Sbjct: 47  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 106

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +  I G+      E +     TG++ + A+K  +L+ +   PLP           R+
Sbjct: 107 NADLGDIVGV------EGVMFKTNTGELSVKAKKFTLLTKSLR-PLPDKFHGLQDIEQRY 159

Query: 127 KYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +    +  + R++II  MR  +  + F+E  TP++   +   A    V   
Sbjct: 160 RQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTHH 219

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 220 NALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYAD 278

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E+++R +  E      V  N   I  + A  R             + +  + 
Sbjct: 279 YHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTRLH-----------IVDAVKE 327

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
               +F             +   I  K       +   +NE+   + +  L    +    
Sbjct: 328 ATGVDFYEVKSDEEAKALAKEHGIEIK---DTMKYGHILNEFFEQKVEETLIQPTFIY-- 382

Query: 366 SGNVAGMGPVAKHLNIV 382
            G+   + P+AK     
Sbjct: 383 -GHPTEISPLAKKNPED 398



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 10/154 (6%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
           +A+E GI   +  ++  I++  F+E   EE  I      F       +  L   +    +
Sbjct: 345 LAKEHGIEIKDTMKYGHILN-EFFEQKVEETLIQPT---FIYGHPTEISPLAKKNPEDPR 400

Query: 479 -AFQYDLVCNGFEIASGGIRNHMSEVM----LQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +++L   G E A+     +             +      +           A + GM
Sbjct: 401 FTDRFELFIVGREHANAFTELNDPIDQKGRFEAQLAEKAQGNDEAHEMDEDYIEALEYGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 461 PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQ 494


>gi|227328401|ref|ZP_03832425.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 505

 Score =  217 bits (552), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 66/284 (23%), Positives = 124/284 (43%), Gaps = 19/284 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + ++G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L  
Sbjct: 61  LEELGIEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              D        R+ ++ ++R  M+   F+E  TP++        AR F+          
Sbjct: 175 IANDESRNTFRIRSNVMAAIRRFMVDNGFMEVETPMMQVIPGGASARPFITHHNALDIDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIV 292

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY 286
             EN+ R + ++     TV            F ++   +AI +Y
Sbjct: 293 LTENLFRTLTQDVLGSTTVEYGDQTFDFGKPFEKLTMREAICKY 336



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 8/151 (5%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLS 476
             IAQ LGI     +    I+    +E   E   I       T     +  L + ND   
Sbjct: 352 TAIAQSLGIKIEKSWGLGRIV-TEIFEETAESSLIQPTF--ITEYPAEVSPLARRNDQNP 408

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCG 532
               +++    G EI +G    + +E   + F+    +K+  ++           A + G
Sbjct: 409 EITDRFEFFIGGREIGNGFSELNDAEDQAERFAQQVNAKDAGDDEAMFYDEDYVTALEHG 468

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 469 LPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|302871283|ref|YP_003839919.1| lysyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574142|gb|ADL41933.1| lysyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 495

 Score =  217 bits (552), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 71/322 (22%), Positives = 135/322 (41%), Gaps = 24/322 (7%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   D+        G FV ++G +   R HG   F+DI D  G  Q+    D    E  
Sbjct: 41  THYSTDIKENFDQFEGKFVCVAGRMLSKRGHGKASFVDILDTKGKIQIYIKIDEVGEEKY 100

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  +  + +   G ++    E        G++ + A++IE+L+     PLP         
Sbjct: 101 QEFKEYYDI---GDIIGVKGEVF--KTHKGEVSIKAKEIEMLTKCLR-PLPEKWHGLRDV 154

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL  +   ++  +KR+ II S+R  +    F+E  TP+L+  +    AR F
Sbjct: 155 DTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFLDDRGFLEVETPVLSPIAGGAAARPF 214

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + + + L+  GFD+ +++   FR+E       P EF  +++ 
Sbjct: 215 ITHHNALDIDLY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIY 272

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS---------NGNTVSNNFLRICYDDAIRRYGTDKP 291
            ++ +  D+++  E ++  V +E               ++  + R+   +AI++Y     
Sbjct: 273 QAYADYKDMMDLTEELITTVAQEVLSTLKITYQGQEIDLTPPWQRLTMVEAIKKY--VGV 330

Query: 292 DLRNPIIMHNVTEHFVHSEFRV 313
           D  N   +    +        V
Sbjct: 331 DFENVSSLDEARKIAKDLGIEV 352



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 7/161 (4%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
            S   +AR  IA++LGI     ++   I++   +E   E+  I          +    + 
Sbjct: 335 VSSLDEAR-KIAKDLGIEVEENWQVGHIIN-EVFEKKVEDFLIQPTFIMDYPVEVSPLAK 392

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
           +  D       +++L     EIA+     +      + F      ++             
Sbjct: 393 RKKDNPQF-TERFELFITCREIANAFSELNDPFDQKERFLEQLKERQRGNQEAHMMDEDF 451

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+VMLL  + ++R+V LFP  +
Sbjct: 452 IEALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFPTMR 492


>gi|317472903|ref|ZP_07932209.1| lysyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316899623|gb|EFV21631.1| lysyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 637

 Score =  216 bits (551), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 144/377 (38%), Gaps = 29/377 (7%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   ++        G  V ++G +   R  G   F +I+D  G  Q     D    E  
Sbjct: 38  THHSMEIKDHFEELEGKEVSVAGRMMFKRVMGKASFCNIQDLEGRIQAYVARDEIGVEEY 97

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  +   +  I G+      +       TG+  + A+++ +LS + + PLP         
Sbjct: 98  KDFKKMDIGDIIGI------KGTVFVTKTGEKSIHAKEVVLLSKSLK-PLPEKFHGLKDT 150

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             R++ R++DL  +   K+  +KR++II+ +R  +  + F+E  TP+L  ++   A    
Sbjct: 151 DARYRQRYVDLIMNEESKDTFIKRSKIISKIRSFLDGQGFMEVETPMLVPNAGGAAARPF 210

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  + + Y + L+  G ++ ++I   FR+E   +   P EF  +++  
Sbjct: 211 ETHYNALDEDVKLRISLELYLKRLIVGGLEKVYEIGRVFRNEGVDTRHNP-EFTLMELYQ 269

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ + + ++   EN+ R + +E     T++ N + +              DL  P     
Sbjct: 270 AYTDYNGMMELTENLYRYLAQEVVGSTTITYNGIEM--------------DLGKPFEKIT 315

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           + +         F +I +V    +                D +N +     +  L    +
Sbjct: 316 MVDAVKKYAGVDFDEIHTVEDARKAADEHHVEYEERHKKGDILNLFFEEFVEDKLVQPTF 375

Query: 362 RLDESGNVAGMGPVAKH 378
            LD    +    P+ K 
Sbjct: 376 VLDHPVEI---SPLTKK 389



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 30/160 (18%)

Query: 417 RNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           R+     L +     +     +  +++D P               +P T  +        
Sbjct: 351 RHKKGDILNLFFEEFVEDKLVQPTFVLDHP------------VEISPLTKKKPENPDY-- 396

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYR 527
                    +++   NG+E+A+     +      + F          +            
Sbjct: 397 -------VERFEFFMNGWEMANAYSELNDPIDQRERFKAQEELLAQGDEEANSTDEDFLN 449

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++
Sbjct: 450 ALEIGMPPTGGIGFGIDRMVMLLTDSSAIRDVLLFPTMKS 489


>gi|332159186|ref|YP_004424465.1| aspartyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034649|gb|AEC52461.1| aspartyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 438

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 98/412 (23%), Positives = 168/412 (40%), Gaps = 39/412 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RTH   ++     G  V+++GWV  V+  GGI F+ +RD  GI QV A       EI K 
Sbjct: 3   RTHYSNEITEELNGQKVKIAGWVQEVKDLGGIKFVWVRDREGIVQVTAPKKKVNQEIFKT 62

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFGEREY 120
              + SE V+ ++G+V                 E+  +K+EI+S A+        G  + 
Sbjct: 63  IPKLNSEDVIVVEGIVNFTPK-------AKLGFEIIPEKLEIISRAKTPLPLDPTGRVKA 115

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RF+DLR   +      R+ +  ++R     E FIE  TP + A++ EG  + 
Sbjct: 116 ELDTRLDNRFIDLRNPKVMAIFKIRSGVFRAVREFFYEEGFIEIHTPKIIATATEGGTEL 175

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  + +F A  Q+PQ YKQ++MA+G DR F+IAP FR E+  + R   E + +D E
Sbjct: 176 FPLKYFEKDAFLA--QSPQLYKQMMMATGLDRVFEIAPIFRAEEHNTTRHLNEAWSIDAE 233

Query: 241 MSFVE-QDDILNTMENVLRGVFEEFSNG------------NTVSNNFLRICYDDAIRRYG 287
           M+F+E ++++++ +E ++  V                   +     F R+ YD A+    
Sbjct: 234 MAFIESEEEVMDLLERLVVYVVNYVRENHERELKILEFELDKPKQPFPRLTYDKALEILK 293

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
               ++          E       ++  + +  N G E++ I          +  + ++ 
Sbjct: 294 DLGKEIPWG-------EDIDTEGEKLLGRYMLENEGAELYFIYKYPSEAKPFYIMKYDDK 346

Query: 348 ARSQGQPGLAYIFWRLDESGNVAGMGPV------AKHLNIVNTEAIRVRLDM 393
                   L Y    +   G       +       K LN  + E      + 
Sbjct: 347 PEICRAFDLEYRGVEISSGGQREHRHDILVQQIKEKGLNPESFEFYLKAFEY 398



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 12/118 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF + +   +          +A  +DL   G EI+SGG R H  ++++Q    
Sbjct: 330 KYPSEAKPFYIMKYDDK------PEICRA--FDLEYRGVEISSGGQREHRHDILVQQIKE 381

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G++       F    +AF+ GMPPHGG   G +R++M +L   N+REV LFP  +  
Sbjct: 382 KGLNP----ESFEFYLKAFEYGMPPHGGFGLGAERLIMRMLDIGNIREVILFPRDRRR 435


>gi|303234996|ref|ZP_07321620.1| lysine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302493851|gb|EFL53633.1| lysine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 636

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 70/298 (23%), Positives = 133/298 (44%), Gaps = 20/298 (6%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           T    D      G  V+++G +   R HG + F+D+ D  G  Q+    +    E    V
Sbjct: 37  TKEISDNFDEFDGKEVKIAGRIMSKRGHGKVNFMDLHDSLGRIQLFNKVNELGEENYAKV 96

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           ++  +  I G+      E       +G+I +  + + +LS + ++ LP          +R
Sbjct: 97  KNMDIGDIVGV------EGSIFKTHSGEISIRTKSVVLLSKSLQI-LPEKWHGLKDPDLR 149

Query: 126 FKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP 183
           ++ R++DL  +   K+  VKR+RII+++R  +    F+E  TPIL T +    AR F+  
Sbjct: 150 YRQRYVDLIMNPEIKDTFVKRSRIISAIREFLDTRGFLEVDTPILNTIAGGANARPFITH 209

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  A + Y + L+  GFD+ +++   FR+E       P E+  +++  ++
Sbjct: 210 HNTLDIDMY-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDHTHNP-EYTAIELYQAY 267

Query: 244 VEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRYGTDKPD 292
            + +D+++  E ++  V E+ +              +  + RI   DAI+ Y     D
Sbjct: 268 ADYNDMMDITEQLVAFVCEKVNGSMKSQFGETEIDFTPPWKRITMVDAIKEYADINFD 325



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 53/128 (41%), Gaps = 5/128 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   EEK +          +    + +  D       +++      EIA+     +   
Sbjct: 358 FEHFCEEKLVQPTFVLGHPVEVSPLAKRNPDDER-YTHRFEAFVCTKEIANAFSELNNPI 416

Query: 503 VMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F     ++E  ++           A + G+PP GG+  G+DR++M+L   +++R+
Sbjct: 417 DQKERFLKQVEARENGDDEAQMMDYDFLNALEVGLPPTGGLGIGVDRLIMMLTNNESIRD 476

Query: 559 VSLFPMSQ 566
           + LFP  +
Sbjct: 477 IMLFPTMK 484


>gi|323705606|ref|ZP_08117180.1| lysyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535083|gb|EGB24860.1| lysyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 506

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 68/288 (23%), Positives = 124/288 (43%), Gaps = 20/288 (6%)

Query: 5   RTHSCGDLGVSD---VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SAC 58
           RT+   D+        G  V ++G +   R HG   F DI+D  G  Q+    D      
Sbjct: 42  RTNMTSDIKNDYDKFEGKTVTIAGRIMSKRGHGKASFADIQDRDGRIQLYFKMDVLGEKN 101

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +EI K +    ++ + G V             TG++ +  Q  ++LS + ++ LP     
Sbjct: 102 YEIFKILDIGDIIGVTGEV---------FKSKTGEVTIRVQDFKLLSKSLQI-LPDKWHG 151

Query: 119 EYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                +R++ R++DL    T+ +  +KRT II ++R  + +  FIE  TPIL T +    
Sbjct: 152 LKDPDLRYRQRYVDLIINPTVKETFIKRTAIIKAIREFLDSRGFIEVETPILHTIAGGAA 211

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ +++   FR+E       P EF  
Sbjct: 212 ARPFITHHNALDIDMY-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNP-EFTL 269

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           L++  ++ +   +++  EN+   V E+ +    +      I      R
Sbjct: 270 LELYEAYTDYHGMMDITENLFAYVAEKVNGSKKIIYQGTEIDLTPPWR 317



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 76/221 (34%), Gaps = 21/221 (9%)

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA-- 414
           AY+  +++ S  +   G        ++      RL M D    F             A  
Sbjct: 291 AYVAEKVNGSKKIIYQG------TEIDLTPPWRRLTMIDAIKEFLDIDFNKVSSDEEAIE 344

Query: 415 -DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
              R+H+  + G+   +            ++   E   I          +    + + +D
Sbjct: 345 IAKRHHLEVKEGMKKGDVIALV-------FDELCESHLIQPTFIIDYPVEISPLAKRKHD 397

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
                  +++    G EIA+     +      + F      +E   +           A 
Sbjct: 398 -NPALTSRFEAFIYGREIANAFSELNDPIDQKERFIEQLKQREAGNDEAHMMDDDFINAL 456

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           + GMPP GG+  GIDR++M +  A ++R+V LFP  +   D
Sbjct: 457 EVGMPPTGGLGIGIDRLIMFMTDAYSIRDVILFPTMKPRTD 497


>gi|218133838|ref|ZP_03462642.1| hypothetical protein BACPEC_01727 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991213|gb|EEC57219.1| hypothetical protein BACPEC_01727 [Bacteroides pectinophilus ATCC
           43243]
          Length = 645

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 67/349 (19%), Positives = 130/349 (37%), Gaps = 23/349 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y T    D      G  V ++G + + R  G   F ++ D  G  Q+    DS   E   
Sbjct: 42  YHTKDIKDNFDELEGKQVSIAGRLMQKRVMGKASFGNVADLNGNIQIYVARDSIGEEPYA 101

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           + +   +    G ++    E        G++ +   +I +L+ + +  LP          
Sbjct: 102 AFKKFDI----GDIVGVKGEVF--RTQKGEMSIHVSEITLLTKSLQ-VLPEKFHGLTDTE 154

Query: 124 IRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           IR++ R+LDL  +   K   VKR++II  +R  +   +F+E  TP+L +++   A     
Sbjct: 155 IRYRQRYLDLIMNPEVKTTFVKRSQIIKEIRNFLDGRDFMEVETPMLVSNAGGAAARPFE 214

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                      L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  +
Sbjct: 215 THYNALDEDVKLRISLELYLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTLMELYQA 273

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           + +   ++   E++ R V E+ +    V               YG  + D   P     +
Sbjct: 274 YTDYYGMMELAESLYRTVCEKVNGTTKVK--------------YGDVEIDFSKPFERITM 319

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
            +         F++I +      V               D +N +    
Sbjct: 320 LDAVKKYSGVDFTQIKTDEEAKAVAKEKGVAFEDRHKKGDILNLFFEEF 368



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 63/182 (34%), Gaps = 33/182 (18%)

Query: 398 SCFFIAGDPLKFCSFAADA---RNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEE 449
           +      +          A   R+     L +     +  +  +  ++MD P        
Sbjct: 332 TQIKTDEEAKAVAKEKGVAFEDRHKKGDILNLFFEEFVEEHLIQPTFVMDHPL------- 384

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                  +P T  +                 +++L  NG+E+A+     +      + F+
Sbjct: 385 -----DISPLTKKKPDAPEY---------VERFELFMNGWEMANAYSELNDPIDQRERFA 430

Query: 510 NVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
                 +  +            A   GMPP GGI  GIDR+VMLL  +  +R+V LFP  
Sbjct: 431 AQDALADAGDEEANHTDEDFLNALAYGMPPTGGIGFGIDRMVMLLTDSAAIRDVLLFPTM 490

Query: 566 QN 567
           ++
Sbjct: 491 KS 492


>gi|315660315|ref|ZP_07913168.1| lysine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315494604|gb|EFU82946.1| lysine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 522

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 73/378 (19%), Positives = 146/378 (38%), Gaps = 28/378 (7%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           +S  +L   +  S V ++G +   R  G   F  I+D  G  Q+    D    E     +
Sbjct: 74  YSKEELHGKEAESHVTIAGRLMTKRGKGKAGFAHIQDLSGQIQIYVRKDQVGEEQFDIWK 133

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G+      + +     TG++ + A+   +LS A   PLP           R+
Sbjct: 134 IADLGDIVGI------DGVMFKTNTGELTVKAKTFTLLSKALR-PLPDKFHGLQDIEQRY 186

Query: 127 KYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+LDL  +    +  + R++II  MR  +  + F+E  TP++        AR F+   
Sbjct: 187 RQRYLDLITNKESTQTFIHRSKIIQEMRNYLNNKGFLEVETPMMHQIPGGAAARPFVTHH 246

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ 
Sbjct: 247 NALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYA 304

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +  DI++  E+++R + +E      V  N   I  + +  R             + +  +
Sbjct: 305 DFHDIMDLTESLIRHIAQEVFGSAKVQYNGEEIDLESSWTRLH-----------IVDAVK 353

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                +F             +   I  K    N  +   +NE+   + +  L    +   
Sbjct: 354 EATGVDFYQVKSDEEAKALAKEHGIEIK---ENMKYGHILNEFFEQKVEETLIQPTFIY- 409

Query: 365 ESGNVAGMGPVAKHLNIV 382
             G+   + P+AK     
Sbjct: 410 --GHPIEISPLAKKNPED 425



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
           +A+E GI      ++  I++  F+E   EE  I      F       +  L   +    +
Sbjct: 372 LAKEHGIEIKENMKYGHILN-EFFEQKVEETLIQPT---FIYGHPIEISPLAKKNPEDPR 427

Query: 479 -AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGM 533
              +++L   G E A+     +      + F    + K    +           A + GM
Sbjct: 428 FTDRFELFIVGREHANAFTELNDPIDQRERFEAQLVEKAQGNDEAHEMDEDFIEALEYGM 487

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 488 PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQ 521


>gi|210610360|ref|ZP_03288365.1| hypothetical protein CLONEX_00555 [Clostridium nexile DSM 1787]
 gi|210152510|gb|EEA83516.1| hypothetical protein CLONEX_00555 [Clostridium nexile DSM 1787]
          Length = 496

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 64/343 (18%), Positives = 135/343 (39%), Gaps = 27/343 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            +  G  V ++G +   R  G   F +++D  G  Q     D    E  K  +   +   
Sbjct: 53  ETMEGKKVSIAGRIMSKRVMGKASFCNVQDLQGNIQSYVARDCVGEEAYKDFKKMDI--- 109

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    E     +  G+I + A+++ +L+ + ++ LP          +R++ R++DL
Sbjct: 110 -GDIVGIKGEIFRTKM--GEISIHAEEVTLLAKSLQI-LPEKFHGLTNTDLRYRQRYVDL 165

Query: 134 RRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +  +    VKR++I+ S+R  +  + F+E  TP+L A++   A               
Sbjct: 166 IMNPDVKDTFVKRSKILASIRRYLDGQGFMEVETPMLVANAGGAAARPFETHFNALNEDL 225

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + +++ 
Sbjct: 226 KLRISLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMMDL 284

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            EN+ R V +E     T++ N + +              DL  P     + +        
Sbjct: 285 TENLYRYVAQEVLGTTTITYNGVEM--------------DLGKPFERITMVDAVKKYAGV 330

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM----NEWARSQ 351
            F +I ++                     D +     E+A   
Sbjct: 331 DFDEIHTLEEARAAAKEHHVEFEERHKKGDILALFFEEFAEEH 373



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F M     +  L      + +   +++   NG+E+A+     +
Sbjct: 365 FFEEFAEEHLIQPT---FVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAYSELN 421

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F          +            A + GMPP GGI  GIDR+ MLL  +  
Sbjct: 422 DPIDQRERFKAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTDSAA 481

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  ++
Sbjct: 482 IRDVLLFPTMKS 493


>gi|27469184|ref|NP_765821.1| lysyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57866087|ref|YP_187752.1| lysyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|242241602|ref|ZP_04796047.1| lysyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|251809824|ref|ZP_04824297.1| lysyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875448|ref|ZP_06284320.1| lysine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|293366159|ref|ZP_06612846.1| lysine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258353|sp|Q8CQV5|SYK_STAES RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71153566|sp|Q5HRN7|SYK_STAEQ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|27316733|gb|AAO05908.1|AE016751_203 lysyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57636745|gb|AAW53533.1| lysyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|242234983|gb|EES37294.1| lysyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|251806692|gb|EES59349.1| lysyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295805|gb|EFA88327.1| lysine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|291319753|gb|EFE60112.1| lysine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329723930|gb|EGG60455.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU144]
 gi|329733011|gb|EGG69350.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU028]
 gi|329737885|gb|EGG74113.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 495

 Score =  216 bits (551), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 65/338 (19%), Positives = 130/338 (38%), Gaps = 23/338 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   +  S V ++G +   R  G   F  I+D  G  Q+    D    +     +   +
Sbjct: 51  ELHEKEDESHVSIAGRLMTKRGKGKAGFAHIQDLKGQIQIYVRKDQVGDDQFNIWKMADL 110

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             I G+      E +     TG+I + A+   +LS +   PLP           R++ R+
Sbjct: 111 GDIIGV------EGVMFKTNTGEISVKAKSFTLLSKSLR-PLPDKFHGLQDIEQRYRQRY 163

Query: 131 LDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDL  +         R++II  MR  +  + F+E  TP++   +   A    V       
Sbjct: 164 LDLITNEDSTQTFINRSKIIQEMRNYLNKQGFLEVETPMMHQIAGGAAARPFVTHHNALD 223

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI
Sbjct: 224 ATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYHDI 282

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++  EN++R + +E                  A  +Y  ++ DL +     ++ +     
Sbjct: 283 MDLTENMVRHIAQEVFG--------------SAKVQYNDEEIDLESSWKRLHIVDAVKEV 328

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
               F  + S      +          N  +   +NE+
Sbjct: 329 TGVDFYNVNSDEEAIRLAKEHDIEITENMKYGHILNEF 366



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 70/203 (34%), Gaps = 9/203 (4%)

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIIN 428
              G      N    +       +   D+   + G D     S     R     ++ I  
Sbjct: 296 EVFGSAKVQYNDEEIDLESSWKRLHIVDAVKEVTGVDFYNVNSDEEAIRLAKEHDIEITE 355

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              +    + +F  +E   EE  I      +  P       K N        +++L   G
Sbjct: 356 NMKYGHI-LNEF--FEQKVEETLIQPT-FIYGHPIEISPLAKKNPNDERFTDRFELFIVG 411

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGID 544
            E A+     +      Q F    + KE       +       A + GMPP GG+  GID
Sbjct: 412 REHANAFTELNDPIDQRQRFEAQLVEKEQGNDEAHDMDEDYIEALEYGMPPTGGLGIGID 471

Query: 545 RIVMLLLGAKNVREVSLFPMSQN 567
           R+VMLL  + ++R+V LFP  + 
Sbjct: 472 RLVMLLTDSPSIRDVLLFPYMRQ 494


>gi|320540120|ref|ZP_08039775.1| lysine tRNA synthetase, constitutive [Serratia symbiotica str.
           Tucson]
 gi|320029786|gb|EFW11810.1| lysine tRNA synthetase, constitutive [Serratia symbiotica str.
           Tucson]
          Length = 505

 Score =  216 bits (551), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 77/345 (22%), Positives = 140/345 (40%), Gaps = 29/345 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +G  V ++G +   R  G   F+ ++D  G  Q+    D    ++      +W L  
Sbjct: 61  LEALGVDVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDELAADVYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDIIGARGKLF--KTKTGELSVHCVELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  K R++I+ SMR  M+   F+E  TP++        AR F+          
Sbjct: 175 IANEGSRNTFKVRSQIMASMRNFMVERGFMEVETPMMQVIPGGASARPFITHHNALDIDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ + +D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYNDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E++ R + E+                  ++ +YG +  D   P    ++TE       
Sbjct: 293 LTESLFRTLAEKVLG--------------TSLVQYGDEVFDFGKPFEKLSMTEAIKKYRP 338

Query: 312 RVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEWARSQ 351
                 L+        A        K  G  R   +   E A S 
Sbjct: 339 ETDLADLADMGKTVAIAESIGIKVVKSWGLGRVVTEIFEEVAESH 383



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 72/203 (35%), Gaps = 30/203 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
            ++    + K+    +   +    DM    +     G  +            I +E  + 
Sbjct: 326 KLSMTEAIKKYRPETDLADLA---DMGKTVAIAESIGIKVVKSWGLGRVVTEIFEE--VA 380

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             +  +  +I ++P                            + NDL      +++    
Sbjct: 381 ESHLIQPTFITEYP---------------------AEVSPLARRNDLNPEITDRFEFFIG 419

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGI 543
           G EI +G    + +E   Q F++   +K+  ++           A + G+PP  G+  GI
Sbjct: 420 GREIGNGFSELNDAEDQAQRFADQMNAKDAGDDEAMFYDEDYVTALEYGLPPTAGLGIGI 479

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR+VML   +  +R+V LFP  +
Sbjct: 480 DRMVMLFTNSHTIRDVILFPAMR 502


>gi|251794120|ref|YP_003008851.1| lysyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247541746|gb|ACS98764.1| lysyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 505

 Score =  216 bits (551), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 67/328 (20%), Positives = 137/328 (41%), Gaps = 23/328 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  D+  +          +    V ++G + + R  G   F  I+D  G  Q+    
Sbjct: 42  RTHNAKDIVSAYEELSKEELEEKAIKVSVAGRIMQKRGMGKASFAHIQDLSGKIQIYVRK 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+       +     +  I G+        +     TG++ + A ++E+L+ +  LPLP 
Sbjct: 102 DTVEANKYAAFEMLDIGDIVGI------TGVVFKTNTGEVSVKAYEVEVLTKSL-LPLPD 154

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                    +R++ R++DL  +  + +  + R+RII SMR  + ++ ++E  TP L + +
Sbjct: 155 KYHGLKDVELRYRQRYVDLIVNPDVQQTFITRSRIIQSMRRYLDSKGYLEVETPTLHSIA 214

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   +R+E   +   P 
Sbjct: 215 GGAAARPFITHHNALDMQLY-MRIAIELHLKRLIVGGLEKVYEIGRVYRNEGISTRHNP- 272

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  DI+   EN++  + +E      +S     I      RR      D
Sbjct: 273 EFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTMKISYQGQEIDLTPQWRR--VSMVD 330

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSV 320
           L   +   + +      E    +K+  V
Sbjct: 331 LVKEVTGVDFSVEMSDEEAHALAKVHKV 358



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 4/104 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
           K N +      +++L     E A+     +      Q F    + KE             
Sbjct: 400 KKNPVDPRFTDRFELFVVAREHANAFTELNDPIDQRQRFEAQLVEKEQGNDEAHEMDDDF 459

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            RA + GMPP GG+  G+DR+VMLL  A ++R+V LFP  +   
Sbjct: 460 IRALEYGMPPTGGLGIGVDRLVMLLTDAPSIRDVLLFPHMRERA 503


>gi|254173017|ref|ZP_04879691.1| aspartyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033173|gb|EEB74001.1| aspartyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 438

 Score =  216 bits (550), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 158/366 (43%), Gaps = 30/366 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YRTH   ++     G  V+++GWV  V+  GGI FL +RD  GI Q+ A       EI 
Sbjct: 1   MYRTHYSSEITEELNGQRVKVAGWVWEVKDLGGIKFLWLRDREGIVQITAPKKKVDPEIF 60

Query: 63  K---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGER 118
           K    + SE V+ ++G V                 E+  +K+EILS AE  LPL   G+ 
Sbjct: 61  KLIPKLNSEDVVAVEGTVNFTPK-------AKLGFEILPEKLEILSRAEAPLPLDPTGKV 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +     R   RF+D+RR  +      R+ +  ++R       FIE  TP + A++ EG  
Sbjct: 114 KAELDTRLDNRFMDVRRPEVMAIFKIRSSVFKAIRDFFHENGFIEIHTPKIIATATEGGT 173

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +        + +F A  Q+PQ YKQ++MASG DR ++IAP FR E+  + R   E + +D
Sbjct: 174 ELFPMKYFEKDAFLA--QSPQLYKQIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSVD 231

Query: 239 MEMSFVE-QDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAIRR 285
            EM+F+E +++++  +E ++          N                 F R+ YD A+  
Sbjct: 232 AEMAFIESEEEVMALLERLVAYTINYVREHNAKELETLNFELEEPKLPFPRLSYDKALEI 291

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
                  +     +    E  +        +     P Y ++  P++         D   
Sbjct: 292 LADLGKTIEWGEDIDTEGERLLGKYMMENEEA----PLYFLYKYPSEAKPFYIMKYDDKP 347

Query: 346 EWARSQ 351
           E  R+ 
Sbjct: 348 EICRAF 353



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 12/118 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF + +   +          +A  +DL   G EI SGG R H  +V+++    
Sbjct: 330 KYPSEAKPFYIMKYDDK------PEICRA--FDLEYRGVEITSGGQREHRVDVLVEQIKE 381

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G++       F    +AF+ GMPPHGG   G +R++  +L   N+REV LFP  +  
Sbjct: 382 KGLNP----ESFEFYLKAFRYGMPPHGGFGLGAERLIKQMLDLPNIREVILFPRDRKR 435


>gi|126641048|ref|YP_001084032.1| lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 428

 Score =  216 bits (550), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 91/537 (16%), Positives = 175/537 (32%), Gaps = 123/537 (22%)

Query: 37  IFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIEL 96
            F+ I+D  G  Q+  +      +  ++++   +  I       +AE        G + +
Sbjct: 6   SFMVIQDMTGRIQLYVDRKGLPKDTLETIKGLDLGDI------IAAEGYIGRSGKGDLYV 59

Query: 97  SAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCR 155
             +  E+L+ +   PLP          ++++ R+LDL  +   +     R +++  +R  
Sbjct: 60  HLEGFELLTKSLR-PLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAF 118

Query: 156 MIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           +  E F+E  TP++        AR F           + L  AP+ Y + L+  GF+R F
Sbjct: 119 LTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLF-LRIAPELYLKRLVVGGFERVF 177

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           +I   FR+E   +   P EF  ++   ++ +  D++   EN+L  +  +      V    
Sbjct: 178 EINRNFRNEGVSTRHNP-EFTMIEFYQAYADYKDLMALTENMLEKLAIDILGTTDVP--- 233

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
                      Y  +    + P    ++           F  IL  NP +          
Sbjct: 234 -----------YQGEVFSFKGPFKKISM-----------FDAILENNPQF------TPEN 265

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
            G+R F                                  +AK +     E ++    + 
Sbjct: 266 VGDREF----------------------------------LAKFVREELKEEVKPGFGLG 291

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
              +  F      K                           +I ++P             
Sbjct: 292 KLQTIVFEETVETKLRQ----------------------PTFITEYP------------A 317

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             +P          +           +++    G E+A+G    +      + F      
Sbjct: 318 ETSPLARRNDDNPHITD---------RFEFFIGGRELANGFSELNDPIDQAERFQAQVAE 368

Query: 515 KEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           K+  ++           A + G+PP  G   GIDR+VML   A ++R+V LFP  + 
Sbjct: 369 KDAGDDEAMHYDAEFVEALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFPHMRR 425


>gi|323442037|gb|EGA99672.1| lysyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 464

 Score =  216 bits (550), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 144/377 (38%), Gaps = 26/377 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D    +     +
Sbjct: 47  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 106

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +  I G+      E +     TG++ + A+K  +L+ +   PLP           R+
Sbjct: 107 NADLGDIVGV------EGVMFKTNTGELSVKAKKFTLLTKSLR-PLPDKFHGLQDIEQRY 159

Query: 127 KYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +    +  + R++II  MR  +  + F+E  TP++   +   A    V   
Sbjct: 160 RQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTHH 219

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 220 NALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYAD 278

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E+++R +  E      V  N   I  + A  R             + +  + 
Sbjct: 279 YHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTRLH-----------IVDAVKE 327

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
               +F             +   I  K       +   +NE+   + +  L    +    
Sbjct: 328 ATGVDFYEVKSDEEAKALAKEHGIEIK---DTMKYGHILNEFFEQKVEETLIQPTFIY-- 382

Query: 366 SGNVAGMGPVAKHLNIV 382
            G+   + P+AK     
Sbjct: 383 -GHPTEISPLAKKNPED 398



 Score = 43.9 bits (102), Expect = 0.084,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 10/124 (8%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
           +A+E GI   +  ++  I++  F+E   EE  I      F       +  L   +    +
Sbjct: 345 LAKEHGIEIKDTMKYGHILN-EFFEQKVEETLIQPT---FIYGHPTEISPLAKKNPEDTR 400

Query: 479 -AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGM 533
              +++L   G E A+     +        F    + K    +           A + GM
Sbjct: 401 FTDRFELFIVGREHANAFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDEDYIEALEYGM 460

Query: 534 PPHG 537
           PP G
Sbjct: 461 PPTG 464


>gi|253576832|ref|ZP_04854157.1| lysyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843699|gb|EES71722.1| lysyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 502

 Score =  216 bits (550), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 67/344 (19%), Positives = 137/344 (39%), Gaps = 33/344 (9%)

Query: 2   HRY-RTHSCGD-------LGVSDVGS---FVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
            +Y RTH  GD       L   ++      V ++G +   R  G   F  ++D  G  Q+
Sbjct: 37  KKYERTHMAGDILRQYDGLSKEELEEKHVEVTIAGRIMAKRVMGKASFAHLQDLSGKIQI 96

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               DS      ++    + +   G ++  + E       TG+  +  + +E+LS +   
Sbjct: 97  YVRQDSVPEVKYQA----FSILDLGDIVGVTGEVF--KTKTGETTIKVKDLEVLSKSL-Y 149

Query: 111 PLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP          +R++ R++DL     + +  +KR++II SMR  + +  ++E  TP L
Sbjct: 150 PLPDKYHGLKDVELRYRQRYVDLIVNPEVQQTFIKRSQIIRSMRRYLDSLGYLEVETPTL 209

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y +  A + + + L+  G ++ ++I   +R+E   + 
Sbjct: 210 HNIAGGAAARPFITHHNALDMQLY-MRIAIELHLKRLIVGGLEKVYEIGRVYRNEGISTR 268

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  +++  ++ +  DI+   EN++  + +E      V      +      RR   
Sbjct: 269 HNP-EFTMIELYEAYADYKDIMALTENLISHIAQEVLGTQVVHYQGHEVNLKPQWRR--- 324

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
                   + M +  +     +F V       +   +   +P +
Sbjct: 325 --------VSMVDAVKEVTGVDFSVQMSNEEAHRLAKEHNVPVE 360



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 11/135 (8%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   EE  I       +P  +    +      D       +++L     E A+     
Sbjct: 372 FFEQFVEETLIQPTFVYGHPVEISP--LAKKNEQDPR--FTDRFELFIVAREHANAFTEL 427

Query: 499 HMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      Q F    + +E              RA + GMPP GG+  G+DR+VMLL  + 
Sbjct: 428 NDPIDQRQRFEAQLLEREQGNDEAHEMDEDFIRALEYGMPPTGGLGIGVDRLVMLLTDSA 487

Query: 555 NVREVSLFPMSQNFC 569
           ++R+V LFP  ++  
Sbjct: 488 SIRDVLLFPHMRSAE 502


>gi|169824684|ref|YP_001692295.1| lysyl-tRNA synthetase class II [Finegoldia magna ATCC 29328]
 gi|167831489|dbj|BAG08405.1| lysyl-tRNA synthetase class II [Finegoldia magna ATCC 29328]
          Length = 636

 Score =  216 bits (550), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 20/298 (6%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           T    D      G  V+++G +   R HG + F+D++D  G  Q+    +    E    V
Sbjct: 37  TKEISDNFDEFDGKEVKIAGRIMSKRGHGKVNFMDLQDSLGRIQLFNKVNELGEENYAKV 96

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           ++  +  I G+      E       +G+I +  + + +LS + ++ LP          +R
Sbjct: 97  KNMDIGDIVGV------EGSIFKTHSGEISIRTKSVVLLSKSLQI-LPEKWHGLKDPDLR 149

Query: 126 FKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP 183
           ++ R++DL  +   K+  VKR+RII+++R  +    F+E  TPIL T +    AR F+  
Sbjct: 150 YRQRYVDLIMNPEIKDTFVKRSRIISAIREFLDTRGFLEVDTPILNTIAGGANARPFITH 209

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  A + Y + L+  GFD+ +++   FR+E       P E+  +++  ++
Sbjct: 210 HNTLDIDMY-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDHTHNP-EYTAIELYQAY 267

Query: 244 VEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRYGTDKPD 292
            + +D+++  E ++  V E+ +              +  + RI   DAI+ Y     D
Sbjct: 268 ADYNDMMDITEQLVAFVCEKVNGSMKSQFGETEIDFTPPWKRITMVDAIKEYADINFD 325



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 53/128 (41%), Gaps = 5/128 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   EEK +          +    + +  D       +++      EIA+     +   
Sbjct: 358 FEHFCEEKLVQPTFVLGHPVEVSPLAKRNPDDER-YTHRFEAFVCTKEIANAFSELNNPI 416

Query: 503 VMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F     ++E  ++           A + G+PP GG+  G+DR++M+L   +++R+
Sbjct: 417 DQKERFLKQVEARENGDDEAQMMDYDFLNALEVGLPPTGGLGIGVDRLIMMLTNNESIRD 476

Query: 559 VSLFPMSQ 566
           + LFP  +
Sbjct: 477 IMLFPTMK 484


>gi|146295866|ref|YP_001179637.1| lysyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145409442|gb|ABP66446.1| lysyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 495

 Score =  216 bits (550), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 69/295 (23%), Positives = 130/295 (44%), Gaps = 22/295 (7%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   ++        G FV ++G +   R HG   F+DI D  G  Q+    D    E  
Sbjct: 41  THYSTEIKENFEKFEGQFVSVAGRMLSKRGHGKASFVDILDPKGKIQIYIKIDEVGEEKY 100

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  +  + +   G ++    E        G+I + A++IE+L+     PLP         
Sbjct: 101 QEFKEYYDI---GDIIGVKGEVF--KTHKGEISIKAKEIEMLTKCLR-PLPEKWHGLRDV 154

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL  +   ++  +KR+ +I S+R  +    F+E  TP+L+  +    AR F
Sbjct: 155 DTRYRKRYLDLIVNHQVRDTFIKRSLMIRSIRKYLDDRGFLEVETPVLSPIAGGAAARPF 214

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + + + L+  GFD+ +++   FR+E       P EF  +++ 
Sbjct: 215 ITHHNALDIDLY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIY 272

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            ++ +  D++N  E ++  V +E      ++           + R+   DAI++Y
Sbjct: 273 QAYADYKDMMNLTEELITTVAKEVLGTLKITYQGQEIDLTPPWQRLTMIDAIKKY 327



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 56/319 (17%), Positives = 107/319 (33%), Gaps = 15/319 (4%)

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDD---AIRRYGTDKPDLRNPIIMHNVTE-HFVHSEF 311
           ++R + +   +   +      +       A R + T    L   + +   TE H      
Sbjct: 181 MIRSIRKYLDDRGFLEVETPVLSPIAGGAAARPFITHHNALDIDLYLRIATELHLKRLIV 240

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
             F K+  +   +    I  K         +    +A  +    L            +  
Sbjct: 241 GGFDKVYELGRVFRNEGISIKHNPEF-TTIEIYQAYADYKDMMNLTEELITTVAKEVLGT 299

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
           +  +      ++      RL M   D+     G      S   +AR  IA++LGI     
Sbjct: 300 L-KITYQGQEIDLTPPWQRLTMI--DAIKKYVGVDFSQVSSLDEAR-KIAKDLGIEVEEN 355

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
           ++   I++   +E   E+  +          +    + +  D       +++L     EI
Sbjct: 356 WQVGHIIN-EVFEQKVEDFLVQPTFIMDYPVEVSPLAKRKKDNPQF-TERFELFITCREI 413

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           A+     +      + F      ++               A + GMPP GG+  GIDR+V
Sbjct: 414 ANAFSELNDPFDQKERFLEQLKERQRGNQEAHMMDEDFIEALEYGMPPTGGLGIGIDRLV 473

Query: 548 MLLLGAKNVREVSLFPMSQ 566
           MLL  + ++R+V LFP  +
Sbjct: 474 MLLTDSYSIRDVLLFPTMR 492


>gi|332982217|ref|YP_004463658.1| lysyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699895|gb|AEE96836.1| lysyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 497

 Score =  216 bits (550), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 72/332 (21%), Positives = 135/332 (40%), Gaps = 25/332 (7%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH+  ++     S  G  V ++G +   R HG   F DI D  G  Q+    D    E  
Sbjct: 42  THNSKEVKEQFDSLDGCEVSIAGRIMAKRGHGKASFCDIMDELGEIQLYVKMDEVGSEAY 101

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  R   +  I G++       I     +G+I +  +  E+L+ +   PLP         
Sbjct: 102 ELFRDLDIGDILGVI------GIVFKTHSGEISVKVKTFELLAKSLR-PLPEKWHGLQDP 154

Query: 123 SIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDF 180
            +R++ R+LDL  +  + +  V R+RII +MR  + A  ++E  TP+L  ++    AR F
Sbjct: 155 DLRYRRRYLDLIMNDKVKETFVTRSRIIKTMRNFLDARGYLEVETPVLQTTAGGATARPF 214

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + + + L+  GF+R ++I   FR+E       P EF  +++ 
Sbjct: 215 ITHHNALDIDMY-LRIATELHLKRLIIGGFERVYEIGRIFRNEGMDIKHNP-EFTTIELY 272

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ +  D+++  E ++  + +E      ++     I      RR           + M 
Sbjct: 273 EAYCDYHDMMDLTEQLITYIAQEVLGTLKITYQGQEIDLALPWRR-----------MRMV 321

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
           +  + F   +F   +             +  K
Sbjct: 322 DAIKEFTGEDFEAVASDDQARALARRLGVEIK 353



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 7/174 (4%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+     G+  +  +    AR  +A+ LG+   +      +++  F  + EE   +    
Sbjct: 322 DAIKEFTGEDFEAVASDDQAR-ALARRLGVEIKDSDTRGNVINAVFETFVEE--HLVQPT 378

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
                P       K  D   + A +++L   G EIA+     +      Q F      + 
Sbjct: 379 FILDYPIEVSPLAKRTDYDPMMAERFELFITGREIANAFSELNDPLDQRQRFIMQAKQRA 438

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             +            A + GMPP GG+  G+DR+VMLL  + ++R+V LFP  +
Sbjct: 439 AGDEEAHMMDEDFVMAMEYGMPPTGGLGIGVDRLVMLLTDSYSIRDVILFPTMR 492


>gi|172041369|ref|YP_001801083.1| lysyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|171852673|emb|CAQ05649.1| lysyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
          Length = 515

 Score =  216 bits (550), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 103/556 (18%), Positives = 183/556 (32%), Gaps = 118/556 (21%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            +  S V ++G V  VR  G + F  ++D  G          +  EI       W   +D
Sbjct: 65  EETDSVVGVAGRVMFVRNTGKLAFATLQDGDGTQ---LQVMLSQAEIGAEALDRWKAEVD 121

Query: 75  -GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++      I++    G++ + AQ+  +   A+ L       +E  E  R ++R+ DL
Sbjct: 122 LGDIVFAKGRVISSR--RGELSVMAQEWTM--AAKALRPLPVAHKEMSEDARVRHRYTDL 177

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             R+   KN + R +++ ++R  +    F E  TP+L        AR F+  S       
Sbjct: 178 IMREEARKNAMTRIKVMRALRHALERRGFNELETPMLQTLHGGAAARPFVTHSNALDIDL 237

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y +  +  G DR F+I   FR+E       P EF  L+   ++ + +    
Sbjct: 238 Y-LRIAPELYLKRAVVGGLDRVFEINRNFRNEGIDRSHSP-EFAMLETYQAYGDYNTAAT 295

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
               V++ V EE                                 + MH+ TE+ +  E+
Sbjct: 296 MTREVIQEVAEEVFGTT---------------------------KLTMHDGTEYDLGGEW 328

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
            V     S+N                  F D+      S                     
Sbjct: 329 PVIEVYPSLNK------------ALAEKFPDQPEVTVDS--------------------- 355

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
                    +   +A+   + ++           P             I +   +     
Sbjct: 356 --------TVEELKALAKVIGLEV----------PKDGGWGHGKLVEEIWE--FLCEDQL 395

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
           +   ++ ++P      E   +   H                        ++DL   GFE+
Sbjct: 396 WGPVFVYNYPV-----ETSPLVRQHR----------------TERGVTEKWDLYLRGFEL 434

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIV 547
           A+G        +  + F +        ++          +A + GMPP  G   G+DR++
Sbjct: 435 ATGYSELVDPVIQRERFEDQARLAAGGDDEAMVLDEDFLQAMEQGMPPTAGTGMGLDRLL 494

Query: 548 MLLLGAKNVREVSLFP 563
           M   G   +RE  LFP
Sbjct: 495 MAFTGLG-IRETVLFP 509


>gi|20090536|ref|NP_616611.1| aspartyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|24212406|sp|Q8TQ68|SYD_METAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|19915564|gb|AAM05091.1| aspartyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 444

 Score =  216 bits (550), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 95/350 (27%), Positives = 155/350 (44%), Gaps = 37/350 (10%)

Query: 5   RTHSCGDLGVS--DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG---ITQVVANPDSACF 59
           RTH   ++     D G  + L+GW+H VR  GGI F+ +RD  G   +T V    D   F
Sbjct: 7   RTHYTAEVKPESVDNGQKITLAGWIHEVRDLGGICFVVLRDREGKAQVTLVKKKIDKELF 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER 118
           + A+ +  E V+ + G V                 EL  ++I++L+VA   LP+   G+ 
Sbjct: 67  DAARRLIRESVISVTGSVKFEEK-------APNGYELLPEEIKVLNVAGSPLPMDTTGKV 119

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           E     R   RF+DLRR         R   + ++R   +   FIE +TP + A++ EG  
Sbjct: 120 EAELDTRLDSRFIDLRRAETTAVFKIRHEALQAIREYFVKNKFIETATPKVVATATEGGT 179

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                +  ++ +F  L Q+PQ +KQ+LM  GFDR F+I P FR E+  + R   E   +D
Sbjct: 180 ALFPITYFDREAF--LNQSPQLFKQILMGGGFDRVFEIGPIFRAEEHDTRRHLNEATSID 237

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNT------------VSNNFLRICYDDAI--- 283
           +E+SF +  D++  +EN++  ++                        FL++ YD+ I   
Sbjct: 238 VEVSFADHFDVMEILENLVAHIYTRVIENCKASLEILGVELKVPKTPFLKLTYDEVIEIV 297

Query: 284 -------RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEV 326
                    +G D   L    + + V E    S + +      + P Y +
Sbjct: 298 NSRCEEKMHWGDDLGTLGEHTVGNYVYETTGESHYFIIDWPTEIKPFYAM 347



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 76/200 (38%), Gaps = 34/200 (17%)

Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF--------- 432
            + E + V L +           + ++  +   + + H   +LG +  +           
Sbjct: 269 ASLEILGVELKVPKTPFLKLTYDEVIEIVNSRCEEKMHWGDDLGTLGEHTVGNYVYETTG 328

Query: 433 -EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
               +I+D+P                PF                   +  +D++    E+
Sbjct: 329 ESHYFIIDWP------------TEIKPFYAMPYEDRPEF--------SKSFDMMHRTMEL 368

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
           +SG  R H+SE++     + G++     + F    +AF+ GMPPH G   G +R VM +L
Sbjct: 369 SSGAQRIHISELLKSRIESQGLNP----DGFEFYLKAFEYGMPPHAGWGMGCERFVMTML 424

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G +N+R+  LFP  +     
Sbjct: 425 GTENIRDTVLFPRDRRRLSP 444


>gi|2501020|sp|Q53638|SYK_STAAU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|567884|gb|AAA53114.1| lysyl-tRNA synthetase [Staphylococcus aureus]
          Length = 495

 Score =  216 bits (550), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 144/377 (38%), Gaps = 26/377 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           +S  +L   +  S V ++G +   R  G   F  ++D  G  Q+    D    +     +
Sbjct: 47  YSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWK 106

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +  I G+      E +     TG++ + A+K  +L+ +   PLP           R+
Sbjct: 107 NADLGDIVGV------EGVMFKTNTGELSVKAKKFTLLTKSLR-PLPDKFHGLQDIEQRY 159

Query: 127 KYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +    +  + R++II  MR  +  + F+E  TP++   +   A    V   
Sbjct: 160 RQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTHH 219

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 220 NALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYAD 278

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E+++R +  E      V  N   I  + A  R             + +  + 
Sbjct: 279 YHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTRLH-----------IVDAVKE 327

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
               +F             +   I  K       +   +NE+   + +  L    +    
Sbjct: 328 ATGVDFYEVKSDEERKALAKEHGIEIK---DTMKYGHILNEFFEQKVEETLIQPTFIY-- 382

Query: 366 SGNVAGMGPVAKHLNIV 382
            G+   + P+AK     
Sbjct: 383 -GHPTEISPLAKKNPED 398



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 77/205 (37%), Gaps = 13/205 (6%)

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIIN 428
             +G      N    +       +   D+     G D  +  S   + R  +A+E GI  
Sbjct: 296 EVLGSAKVQYNGETIDLESAWTRLHIVDAVKEATGVDFYEVKSD--EERKALAKEHGIEI 353

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVC 486
            +  ++  I++  F+E   EE  I      F       +  L   +    +   +++L  
Sbjct: 354 KDTMKYGHILN-EFFEQKVEETLIQPT---FIYGHPTEISPLAKKNPEDPRFTDRFELFI 409

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMPPHGGIAAG 542
            G E A+     +        F    + K    +           A + GMPP GG+  G
Sbjct: 410 VGREHANRFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDEDYIEALEYGMPPTGGLGIG 469

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQN 567
           IDR+VMLL  + ++R+V LFP  + 
Sbjct: 470 IDRLVMLLTDSPSIRDVLLFPYMRQ 494


>gi|15920386|ref|NP_376055.1| aspartyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|62287582|sp|Q976I3|SYD_SULTO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110590680|pdb|1WYD|A Chain A, Crystal Structure Of Aspartyl-Trna Synthetase From
           Sulfolobus Tokodaii
 gi|110590681|pdb|1WYD|B Chain B, Crystal Structure Of Aspartyl-Trna Synthetase From
           Sulfolobus Tokodaii
 gi|15621168|dbj|BAB65164.1| 429aa long hypothetical aspartyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 429

 Score =  216 bits (550), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 105/431 (24%), Positives = 177/431 (41%), Gaps = 42/431 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YR+H   D+     G  V  +GWVH +R  GG  F+ +RD  G+ QVV + +S+ F I+
Sbjct: 1   MYRSHFIADVTPEYDGKEVIWAGWVHLLRDLGGKKFIILRDKTGLGQVVVDKNSSAFGIS 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYP 121
           + +  E V+ + G+V +              IEL A++I +LS A+  LPL V G+ +  
Sbjct: 61  QELTQESVIQVRGIVKADKR-------APRGIELHAEEITLLSKAKAPLPLDVSGKVKAD 113

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              R + R LDLRR  +   I  ++  + + R  +  E FIE  TP + AS+ EG     
Sbjct: 114 IDTRLRERVLDLRRQEMQAVIKIQSLALKAFRETLYKEGFIEIFTPKIIASATEGGAQLF 173

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + +F A  Q+PQ YK+ LMA   +R F++AP +R E+  +     EF  +D+EM
Sbjct: 174 PVIYFGKEAFLA--QSPQLYKE-LMAGVVERVFEVAPAWRAEESDTPFHLAEFISMDVEM 230

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F + +D++  +E +L  + +                    ++    + P+++ PI    
Sbjct: 231 AFADYNDVMQLLEKILHNIVKTIKEEGKEE-----------LKILNYEPPEVKIPIKRLK 279

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
            TE       + ++     + G     I  +    +  F       AR        Y   
Sbjct: 280 YTEAIEILRSKGYNIKFGDDIGTPELRILNEELKEDLYFIVDWPSDARPF------YTKS 333

Query: 362 RLDESGNVAGMGPVAKHLNI----------VNTEAIRVRLDMQDGDSCFFI----AGDPL 407
           + +          + K L I             E    +  ++     FF+     G P 
Sbjct: 334 KSENPELSESFDLIYKFLEIVSGSTRNHKREVLEEALKKKGLKPESFEFFLKWFDYGMPP 393

Query: 408 KFCSFAADARN 418
                   AR 
Sbjct: 394 HAGFGMGLARL 404



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 80/227 (35%), Gaps = 38/227 (16%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           +A+  +          +  + K +     E +++   +        I    LK+      
Sbjct: 230 MAFADYNDVMQLLEKILHNIVKTIKEEGKEELKI---LNYEPPEVKIPIKRLKYTEAIEI 286

Query: 416 AR-----NHIAQELG------IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
            R          ++G      +      +  +I+D+P             A   +T  + 
Sbjct: 287 LRSKGYNIKFGDDIGTPELRILNEELKEDLYFIVDWP-----------SDARPFYTKSKS 335

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
               L         +  +DL+    EI SG  RNH  EV+ +A    G+        F  
Sbjct: 336 ENPEL---------SESFDLIYKFLEIVSGSTRNHKREVLEEALKKKGLKP----ESFEF 382

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             + F  GMPPH G   G+ R++++L G ++V+E+  FP  +     
Sbjct: 383 FLKWFDYGMPPHAGFGMGLARLMVMLTGIQSVKEIVPFPRDKKRLTP 429


>gi|293394609|ref|ZP_06638903.1| lysine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291422918|gb|EFE96153.1| lysine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 505

 Score =  216 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 75/355 (21%), Positives = 138/355 (38%), Gaps = 31/355 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y +    +L    +G  V ++G +   R  G   F+ ++D  G  Q+    D     +  
Sbjct: 53  YDSKENDEL--EALGVEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGVYN 110

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++    +       TG++ +   ++ +L+ A   PLP        + 
Sbjct: 111 EQFKKWDL---GDILGARGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLADQE 164

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++        AR F+
Sbjct: 165 TRYRQRYLDLIANEESRNTFKVRSQIMSGIRNFMVGRGFMEVETPMMQVIPGGASARPFV 224

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M
Sbjct: 225 THHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYM 282

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E++ R + ++                     +YG +  D   P     
Sbjct: 283 AYADYKDLIELTESLFRTLAQDVLGKTA--------------VQYGDEVFDFGKPFEKLT 328

Query: 302 VTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQ 351
           + E        ++              E   I   K  G  R   +   E A S 
Sbjct: 329 MREAIKKYRPETDLADLDDFDKAKAIAESIGIKVEKSWGLGRVVTEIFEETAESH 383



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 70/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   D+ D D       D  K  + +   +   +  LG +    FE
Sbjct: 323 PFEKLTMREAIKKYRPETDLADLDDF-----DKAKAIAESIGIKVEKSWGLGRVVTEIFE 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND       +++    G EI +
Sbjct: 378 ------------ETAESHLIQPTFITEYPAEVSPLARRNDQNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F++   +K+  ++           + + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFADQVAAKDAGDDEAMFYDEDYVTSLEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|319399674|gb|EFV87928.1| lysyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 495

 Score =  216 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 65/338 (19%), Positives = 131/338 (38%), Gaps = 23/338 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   +  S V ++G +   R  G   F  I+D  G  Q+    D    +     +   +
Sbjct: 51  ELHEKEDESHVSIAGRLMTKRGKGKAGFAHIQDLKGQIQIYVRKDQVGDDQFNIWKMADL 110

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             I G+      E +     TG+I + A+   +LS +   PLP           R++ R+
Sbjct: 111 GDIIGV------EGVMFKTNTGEISVKAKSFTLLSKSLR-PLPDKFHGLQDIEQRYRQRY 163

Query: 131 LDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDL  +         R++II  MR  +  + F+E  TP++   +   A    V       
Sbjct: 164 LDLITNEDSTQTFINRSKIIQEMRNYLNKQGFLEVETPMMHQIAGGAAARPFVTHHNALD 223

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI
Sbjct: 224 ATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYHDI 282

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++  EN++R + +E                  A  +Y  ++ DL +     ++ +    +
Sbjct: 283 MDLTENMVRHIAQEVFG--------------SAKVQYNGEEIDLESSWKRLHIVDAVKEA 328

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
               F  + S      +          N  +   +NE+
Sbjct: 329 TGVDFYNVNSDEEAIRLAKEHDIEITENMKYGHILNEF 366



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 69/203 (33%), Gaps = 9/203 (4%)

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIIN 428
              G      N    +       +   D+     G D     S     R     ++ I  
Sbjct: 296 EVFGSAKVQYNGEEIDLESSWKRLHIVDAVKEATGVDFYNVNSDEEAIRLAKEHDIEITE 355

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              +    + +F  +E   EE  I      +  P       K N        +++L   G
Sbjct: 356 NMKYGHI-LNEF--FEQKVEETLIQPT-FIYGHPIEISPLAKKNPNDERFTDRFELFIVG 411

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGID 544
            E A+     +      Q F    + KE       +       A + GMPP GG+  GID
Sbjct: 412 REHANAFTELNDPIDQRQRFEAQLVEKEQGNDEAHDMDEDYIEALEYGMPPTGGLGIGID 471

Query: 545 RIVMLLLGAKNVREVSLFPMSQN 567
           R+VMLL  + ++R+V LFP  + 
Sbjct: 472 RLVMLLTDSPSIRDVLLFPYMRQ 494


>gi|47207855|emb|CAF90608.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 664

 Score =  216 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 98/307 (31%), Positives = 154/307 (50%), Gaps = 14/307 (4%)

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G FY+LPQ+PQQ+KQLLM +G DRYFQIA C+RDE  + DR P EF Q+D+EMSFVEQ  
Sbjct: 181 GQFYSLPQSPQQFKQLLMVAGIDRYFQIARCYRDEGSKPDRQP-EFTQVDIEMSFVEQTG 239

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I++ +E +L+  + +      +   F  + +++A+R YG DKPD R  + +  + + F+ 
Sbjct: 240 IMSLVEALLQHSWPDQLGP--LQLPFQTMTFEEAMRDYGVDKPDTRFAMKLVELRDVFLS 297

Query: 309 SEFRVFSKILSV-NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESG 367
           ++ +     LS      +   +P           + + E A +Q    L+ +  R  E G
Sbjct: 298 TDVQFVRAALSQPGGSVQAIRVPGGMKHLTGRHLNTLRETAATQFGQELSLVQLR--EDG 355

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-- 425
            +  + P+ K L+   TE +  R     GD     AG      S     R   A+ L   
Sbjct: 356 TL--ISPLKKLLSPETTEELLQRTGSGPGDLLLIAAGSLDTVRSMLGHLRLKCAELLESC 413

Query: 426 ---IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
              + + + F F W++DFP +  +EEE +K++ AH+PFT P      L   +   +    
Sbjct: 414 GALVRDPSVFHFLWVLDFPLFLASEEEVEKLESAHHPFTAPLPEDAHLLYTEPQKVVPRA 473

Query: 482 YDLVCNG 488
             L+C G
Sbjct: 474 LLLLCEG 480



 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 6/118 (5%)

Query: 411 SFAADARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEE-KKIDFAHNPFTMPQG 464
           S     R   A+ L      + + + F F W++DFP +  +EEE +K++ AH+PFT P  
Sbjct: 1   SMLGHLRLKCAELLESCGALVRDPSVFHFLWVLDFPLFLASEEEAEKLESAHHPFTAPLP 60

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
               L   +   ++   YDLV NG E+  G IR H +        N+        N F
Sbjct: 61  EDAHLLYTEPQKVRGQHYDLVLNGCEVGGGSIRIHKASEQHHVLKNILKVSSKEVNHF 118


>gi|121996858|ref|YP_001001645.1| lysyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|121588263|gb|ABM60843.1| lysyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 495

 Score =  216 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 66/286 (23%), Positives = 119/286 (41%), Gaps = 18/286 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +   G+ V + G +   R  G   F  ++D  G  Q+    D        + +   V  I
Sbjct: 52  LEQEGARVTVGGRMMAKRVMGKASFAQLQDSSGRIQLYLRRDDLPEGAYAAFKGWDVGDI 111

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G      A         G++ +  ++I +L+ +   PLP          IR++ R+LDL
Sbjct: 112 VG------ATGTIFRTKKGELSIQCEEIRLLTKSLR-PLPEKWHGLNDHEIRYRQRYLDL 164

Query: 134 RRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   + +   RTR++ +MR  +    F+E  TP++       A    V      G   
Sbjct: 165 IVNEESQRVFALRTRVLAAMRRFLDERGFMEVETPMMQPIPGGAAARPFVTHHNALGRDL 224

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  GF+R +++   FR+E   +   P EF  L+   +F +  D+++ 
Sbjct: 225 YLRIAPELYLKRLVVGGFERVYEVNRNFRNEGVSTRHNP-EFTMLEFYQAFADYRDLMDL 283

Query: 253 MENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTD 289
            E +LR + E+      V+           F RI   +A+ R+ +D
Sbjct: 284 TEEMLRHLAEQALGSGQVTWQGETYDFASSFERISLIEAVLRFNSD 329



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 11/132 (8%)

Query: 442 FYEWNEEEKKIDFAHNPF--TMPQGGMESLKGN-DLLSIKAFQYDLVCNGFEIASGGIRN 498
            +E   E +     H P   T     +  L    D       +++L+  G EIA+G    
Sbjct: 365 LFEETAEPR----LHGPVFVTDYPKEVSPLARPLDDDPCYTERFELIVGGREIANGFSEL 420

Query: 499 HMSE----VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           + +E          +      +   +      RA + G+PP  G   GIDR+VMLL    
Sbjct: 421 NDAEDQAARFRAQAAERDAGDQEAMHYDADYIRALEYGLPPTAGEGIGIDRLVMLLADCD 480

Query: 555 NVREVSLFPMSQ 566
           ++R+V LFP  +
Sbjct: 481 SIRDVLLFPAMR 492


>gi|157372123|ref|YP_001480112.1| lysyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166980070|sp|A8GIP4|SYK_SERP5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157323887|gb|ABV42984.1| lysyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 505

 Score =  216 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 75/345 (21%), Positives = 133/345 (38%), Gaps = 29/345 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +G  V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L  
Sbjct: 61  LEALGVEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGVYNEEFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              D   K    R++I+ +MR  M+   F+E  TP++        AR F+          
Sbjct: 175 IANDESRKTFQVRSQIMAAMRNFMVERGFMEVETPMMQVIPGGASARPFVTHHNALDIDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E++ R + +                      +YG +  D   P +   +TE       
Sbjct: 293 LTESLFRTLTQNVLGNTQ--------------VQYGDEVFDFGKPFVKLTMTEAIKKYRP 338

Query: 312 RVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEWARSQ 351
                 L+        A        K  G  R   +   E A S 
Sbjct: 339 ETDLADLADMGKAVAIAESIGIKVEKSWGLGRVVTEIFEEVAESH 383



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 69/200 (34%), Gaps = 30/200 (15%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
            +     + K+    +   +          +     G  ++           I +E  + 
Sbjct: 326 KLTMTEAIKKYRPETDLADLADMGKAV---AIAESIGIKVEKSWGLGRVVTEIFEE--VA 380

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             +  +  +I ++P                            + ND+      +++    
Sbjct: 381 ESHLIQPTFITEYP---------------------AEVSPLARRNDVNPEITDRFEFFIG 419

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGI 543
           G EI +G    + +E   Q F++   +K+  ++           A + G+PP  G+  GI
Sbjct: 420 GREIGNGFSELNDAEDQAQRFADQANAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGI 479

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           DR+VML   +  +R+V LFP
Sbjct: 480 DRMVMLFTNSHTIRDVILFP 499


>gi|304315888|ref|YP_003851033.1| lysyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302777390|gb|ADL67949.1| lysyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 506

 Score =  216 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 20/288 (6%)

Query: 5   RTHSCGDLGVSD---VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SAC 58
           RT+   ++        G  V ++G +   R HG   F DI+D  G  Q+    D      
Sbjct: 42  RTNMTSEIKNDYDNFEGKTVTIAGRIMSKRGHGKASFADIQDRDGRIQLYFKLDVLGEKN 101

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +EI K +    ++ + G V             TG++ +  Q  ++LS + +  LP     
Sbjct: 102 YEIFKILDIGDIIGVTGEV---------FKSKTGEVTIRVQDFKLLSKSLQ-VLPDKWHG 151

Query: 119 EYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                +R++ R++DL  +  + +  +KRT II ++R  + +  FIE  TPIL T +    
Sbjct: 152 LKDPDLRYRQRYVDLIINPGVKETFIKRTAIIKAIREFLDSRGFIEVETPILHTIAGGAA 211

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ +++   FR+E       P EF  
Sbjct: 212 ARPFITHHNALDIDMY-LRIALELHLKRLIVGGLEKVYEMGRVFRNEGMDIRHNP-EFTL 269

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           L++  ++ +   +++  EN+   V E+ +    +      I      R
Sbjct: 270 LELYEAYTDYHGMMDITENLFAYVAEKVNGSKKIVYQGTEIDLTPPWR 317


>gi|289551683|ref|YP_003472587.1| Lysyl-tRNA synthetase (class II) [Staphylococcus lugdunensis
           HKU09-01]
 gi|289181214|gb|ADC88459.1| Lysyl-tRNA synthetase (class II) [Staphylococcus lugdunensis
           HKU09-01]
          Length = 495

 Score =  216 bits (549), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 73/378 (19%), Positives = 146/378 (38%), Gaps = 28/378 (7%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           +S  +L   +  S V ++G +   R  G   F  I+D  G  Q+    D    E     +
Sbjct: 47  YSKEELHDKEAESHVTIAGRLMTKRGKGKAGFAHIQDLSGQIQIYVRKDQVGEEQFDIWK 106

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G+      + +     TG++ + A+   +LS A   PLP           R+
Sbjct: 107 IADLGDIVGI------DGVMFKTNTGELTVKAKTFTLLSKALR-PLPDKFHGLQDIEQRY 159

Query: 127 KYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+LDL  +    +  + R++II  MR  +  + F+E  TP++        AR F+   
Sbjct: 160 RQRYLDLITNKESTQTFIHRSKIIQEMRNYLNNKGFLEVETPMMHQIPGGAAARPFVTHH 219

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ 
Sbjct: 220 NALDATLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYA 277

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +  DI++  E+++R + +E      V  N   I  + +  R             + +  +
Sbjct: 278 DFHDIMDLTESLIRHIAQEVFGSAKVQYNGEEIDLESSWTRLH-----------IVDAVK 326

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                +F             +   I  K    N  +   +NE+   + +  L    +   
Sbjct: 327 EATGVDFYQVKSDEEAKALAKEHGIEIK---ENMKYGHILNEFFEQKVEETLIQPTFIY- 382

Query: 365 ESGNVAGMGPVAKHLNIV 382
             G+   + P+AK     
Sbjct: 383 --GHPIEISPLAKKNPED 398



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK 478
           +A+E GI      ++  I++  F+E   EE  I      F       +  L   +    +
Sbjct: 345 LAKEHGIEIKENMKYGHILN-EFFEQKVEETLIQPT---FIYGHPIEISPLAKKNPEDPR 400

Query: 479 -AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGM 533
              +++L   G E A+     +      + F    + K    +           A + GM
Sbjct: 401 FTDRFELFIVGREHANAFTELNDPIDQRERFEAQLVEKAQGNDEAHEMDEDFIEALEYGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 461 PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQ 494


>gi|242398426|ref|YP_002993850.1| Aspartyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242264819|gb|ACS89501.1| Aspartyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 438

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 99/364 (27%), Positives = 160/364 (43%), Gaps = 37/364 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YRTH  G +        +R++GWVH V+  GGI FL IRD  GI QV A       E+ 
Sbjct: 1   MYRTHYSGQITEELNNQKIRVAGWVHEVKDLGGIKFLWIRDREGIVQVTAPKKKVSEEVF 60

Query: 63  K---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFGER 118
               S+ +E V+ ++G+V       +         EL  +KI +LS AE        G+ 
Sbjct: 61  NLIPSLHNEDVVSVEGIVNFTPKARL-------GFELIPEKIILLSKAETPLPLDPTGKV 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +     R   RF+DLRR  +      R+    ++R     E F+E  TP + A++ EG  
Sbjct: 114 KAELDTRLDNRFMDLRRPEIMAIFKIRSSTFRAVRDFFHNEGFVEIHTPKIIATATEGGT 173

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +        + +F A  Q+PQ YKQ++MASG DR F+IAP FR E+  + R   E + +D
Sbjct: 174 ELFPMKYFEKDAFLA--QSPQLYKQIMMASGLDRVFEIAPIFRAEEHNTTRHLNEAWSID 231

Query: 239 MEMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVSNN------------FLRICYDDAIRR 285
            EM+F+E +D ++  +E+++          N                 F R+ Y +A+  
Sbjct: 232 GEMAFIEDEDEVMKLLEHLITYAVNYVRENNEKELQTLGFELEEPKLPFRRVTYTEALEI 291

Query: 286 ---------YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
                    +G D       ++   + E++    + ++    S  P Y +          
Sbjct: 292 LRDLGKEISWGEDIDTEGEKLLGQYIKENYDEDLYFIYQYPSSAKPFYIMRYDNKP--EI 349

Query: 337 NRAF 340
           +R+F
Sbjct: 350 SRSF 353



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 4/99 (4%)

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D     +  +DL   G EI SGG R H  E +    +  G++       F    +AF+ G
Sbjct: 344 DNKPEISRSFDLEYRGIEITSGGQREHRYEKLKAQIAEQGLNV----ESFDFYLKAFRYG 399

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           MPPHGG   G +R++  +L   N+REV LFP  +   + 
Sbjct: 400 MPPHGGFGLGAERLIKQMLNLGNIREVMLFPRDRRRLEP 438


>gi|270264899|ref|ZP_06193163.1| lysyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270041197|gb|EFA14297.1| lysyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 505

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 73/345 (21%), Positives = 134/345 (38%), Gaps = 29/345 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +G  V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L  
Sbjct: 61  LEALGVEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGVYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  K R++++  +R  M+   F+E  TP++        AR F+          
Sbjct: 175 IANDESRNTFKVRSQVMAGIRNFMVERGFMEVETPMMQVIPGGASARPFVTHHNALDIDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E++ R + ++                     +YG +  D   P     +TE       
Sbjct: 293 LTESLFRTLTQDVLGKTQ--------------VQYGDEVFDFGKPFEKLTMTEAIKKYRP 338

Query: 312 RVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEWARSQ 351
                 L+        A        K  G  R   +   E A S 
Sbjct: 339 ETDLADLADMGKAVAIAESIGIKIEKSWGLGRVVTEIFEEVAESH 383



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 68/200 (34%), Gaps = 30/200 (15%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
            +     + K+    +   +          +     G  ++           I +E  + 
Sbjct: 326 KLTMTEAIKKYRPETDLADLADMGKAV---AIAESIGIKIEKSWGLGRVVTEIFEE--VA 380

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             +  +  +I ++P               +P          +           +++    
Sbjct: 381 ESHLIQPTFITEYP------------AEVSPLARRNDENPEITD---------RFEFFIG 419

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGI 543
           G EI +G    + +E   Q F++   +K+  ++           A + G+PP  G+  GI
Sbjct: 420 GREIGNGFSELNDAEDQAQRFADQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGI 479

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           DR+VML   +  +R+V LFP
Sbjct: 480 DRMVMLFTNSHTIRDVILFP 499


>gi|255564836|ref|XP_002523412.1| lysyl-tRNA synthetase, putative [Ricinus communis]
 gi|223537362|gb|EEF38991.1| lysyl-tRNA synthetase, putative [Ricinus communis]
          Length = 585

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 95/594 (15%), Positives = 190/594 (31%), Gaps = 142/594 (23%)

Query: 5   RTHSCGDLGV-----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RTH+   L              +    V ++G +   R  G + FL +RD  G  Q+   
Sbjct: 93  RTHTANQLQEIYRYLANGEELRNESDNVSIAGRIVARRAFGKLAFLTLRDDSGTIQLYCE 152

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            +    +  + +++   L   G ++  S          G++ +      IL+ +  LPLP
Sbjct: 153 KERLLNDEFEKLKT---LVDIGDILGASGSMKRTE--KGELSICVNSFTILTKSL-LPLP 206

Query: 114 VFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                      R++ R++D+     +     KR +I++ +R  + +  F+E  TP+L  +
Sbjct: 207 DKYHGLTDVDKRYRQRYVDMIANPEVADVFRKRAKIVSEIRKTVESSGFLEVETPVLQGA 266

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           +        V    + G    L  A + + + ++  GF++ ++I   FR+E   +   P 
Sbjct: 267 AGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNP- 325

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  ++                     ++E +S+  ++ N    I    A+  +G    D
Sbjct: 326 EFTTIE---------------------MYEAYSDYQSMMNMAEEIVTRCALAVHGKLTID 364

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
            +                  V  +              A G   N    D          
Sbjct: 365 YQ---------------GVDVCLERPWRRETMHNLVKEATGIDFNELGND---------- 399

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
                    ++ +   +  +GPV                 ++  D            CS 
Sbjct: 400 --------LKVAKDTTLRNLGPV-----------------LEHKDRSSVEG------CSS 428

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
             +  N + +   ++     +  +++D+P      E   +   H                
Sbjct: 429 VGNLLNEVFEI--VVEPKLLQPTFVLDYPI-----EISPLAKPHR--------------- 466

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMS-------EVMLQAFSNVGISKEVVENRF--- 522
                   +++L   G E+A+               E  ++  +    +           
Sbjct: 467 -RHVGLTERFELFICGRELANAFSELTDPMDQRGRLEEQVRQHNEKRSTISEAHKEEEKK 525

Query: 523 -------------GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                             A + GMPP  G+  GIDR+VMLL  + ++R+V  FP
Sbjct: 526 DEQEDDSYSVTLDDDFLTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFP 579


>gi|310639546|ref|YP_003944304.1| lysyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309244496|gb|ADO54063.1| Lysyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 508

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 70/383 (18%), Positives = 146/383 (38%), Gaps = 28/383 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           + +Y + +  +L   ++   V ++G +   R  G   F  I+D  G  Q+    D+    
Sbjct: 53  LSKYDSLTKEELEEKNI--EVSIAGRIMAKRVMGKASFAHIQDLSGRIQIYVRQDTVPEA 110

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K+     +  I G+      + +     TG+  +    IE+LS +   PLP       
Sbjct: 111 NYKAFGILDLGDIVGV------KGVLFKTKTGETTIKVLDIEVLSKSL-YPLPEKYHGLK 163

Query: 121 PESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
              +R++ R++DL     + K  + R+RII SMR  + +  ++E  TP L A +   A  
Sbjct: 164 DVELRYRQRYVDLVMNPEVQKTFITRSRIIQSMRRYLDSLGYLEVETPTLHAIAGGAAAK 223

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
             V       +   +  A + + + L+  G ++ ++I   +R+E   +   P EF  +++
Sbjct: 224 PFVTHHNALDTQLYMRIAIELHLKRLIVGGMEKVYEIGRVYRNEGVSTRHNP-EFTLIEL 282

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  DI+   EN++  + +E      +      +      RR           + M
Sbjct: 283 YEAYADYKDIMQLTENLIAHIAQEVLGTQHIQYQGQEVDLTPQWRR-----------VSM 331

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +  +     +   FS  +S    + +          +  F   +N +     +  L   
Sbjct: 332 VDAVKEVTGVD---FSAQMSNEEAHRLAKEHKVPVEPHMTFGHILNAFFEHFVEETLIQP 388

Query: 360 FWRLDESGNVAGMGPVAKHLNIV 382
            +     G+   + P+AK     
Sbjct: 389 TFIT---GHPVEISPLAKKNEQD 408



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 11/135 (8%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   EE  I       +P  +    +      D       +++L     E A+     
Sbjct: 376 FFEHFVEETLIQPTFITGHPVEISP--LAKKNEQDPR--FTDRFELFVVAREHANAFTEL 431

Query: 499 HMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      Q F    + +E              RA + GMPP GG+  GIDR+VMLL  A 
Sbjct: 432 NDPIDQRQRFEAQLLEREHGNDEAHQMDDDFIRALEYGMPPTGGLGIGIDRLVMLLTDAP 491

Query: 555 NVREVSLFPMSQNFC 569
           ++R+V LFP  +N  
Sbjct: 492 SIRDVLLFPHMRNRT 506


>gi|209550996|ref|YP_002282913.1| lysyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|259511531|sp|B5ZQW5|SYK_RHILW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|209536752|gb|ACI56687.1| lysyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 497

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 112/583 (19%), Positives = 205/583 (35%), Gaps = 134/583 (22%)

Query: 2   HRYRTHSCGDLG------VSDVGSF--VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +LG       SDV +   V ++G V+  R  G  +F+DI D  G  Q+ ++
Sbjct: 35  HFHRTLTNAELGAKYESLESDVETQDVVTVAGRVYSSRNSG--MFMDIHDASGKIQIFSH 92

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D+   E    +    +  I G+        I      G++ ++AQKIE+L+ +  LP+P
Sbjct: 93  KDTTPEEARALLPMIDIGDIIGV------TGIVRRTKRGELTINAQKIEMLTKSL-LPMP 145

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                     +R++ R LD+  +   K    +R++I++ +R  M  + F+E  TP+L + 
Sbjct: 146 EKWHGLSDIELRYRKRHLDIMTNEDSKLRFQQRSKIVSGIRRFMENDGFMEVETPMLQSI 205

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLP 231
                 +              L  AP+ + +  + SG  D+ F+I   FR+E        
Sbjct: 206 YGGATAEPFKTHHNTLKLDMYLRIAPELFLKRTLVSGLTDKVFEINRNFRNEGVS----- 260

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
               + + E + +E                  +++   + +   R+    A+  +GT + 
Sbjct: 261 ---TRHNPEFTMMECYW--------------AYADYEDMMDLVERLFETLALSIHGTTEF 303

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           D  +                    K LS    ++   +P                     
Sbjct: 304 DFGD--------------------KQLSFKGPFKRVPMPDAVKQVT-------------- 329

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS 411
              G+ ++  + DE                       V  D   G+   FI  + ++   
Sbjct: 330 ---GIDFLAIKTDEEAR-----------TAAKAAGFAVEKDWTWGECLAFIFEEKVEST- 374

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
                         +I  +      +  FP        K I    +PF     G   L  
Sbjct: 375 --------------LIQPSH-----VTHFP--------KDI----SPFAKEVPGEPRL-- 401

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR----FGGLYR 527
                    +++  CN +E+ +     +  E   +              +          
Sbjct: 402 -------VERFETYCNAWELGNAFSELNDPEEQRRRMVEQLEQAHARGEKEKQLDEEFLD 454

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           A   GMPP GG+  G+DR++MLL  A ++R+V LFP  +N  D
Sbjct: 455 AIDQGMPPAGGLGIGVDRLIMLLTNAPSIRDVILFPARRNKAD 497


>gi|157690864|ref|YP_001485326.1| lysyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157679622|gb|ABV60766.1| lysine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 499

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 82/394 (20%), Positives = 157/394 (39%), Gaps = 39/394 (9%)

Query: 2   HRY-RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
            RY R+H    +           + +  + V ++G +   R  G   F  I+D  G  Q+
Sbjct: 35  ERYDRSHQSAQIIAEYDEFSKEDLEEKSAQVTIAGRMMTKRGKGKAGFAHIQDLEGQIQI 94

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               DS   E  +  +S  +    G ++  +      N+  G++ + A   E+L+ A   
Sbjct: 95  YVRKDSVGEEAYELFKSSDL----GDIIGVTGTVFKTNV--GELSIKATSFEVLTKALR- 147

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           R++ R+LDL  +   K   + R++II SMR  + ++ ++E  TP +
Sbjct: 148 PLPDKYHGLKDVEQRYRQRYLDLIVNPESKQTFIMRSKIIQSMRRYLDSKGYLEVETPTM 207

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            +      AR F+          Y +  A + + + L+  G ++ ++I   FR+E   + 
Sbjct: 208 HSIPGGASARPFITHHNALDMPLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTR 266

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  +++  ++ +  DI+N  EN++  + EE     T+               YG 
Sbjct: 267 HNP-EFTMIELYEAYADYKDIMNLTENLIAHIAEEVLGTTTIQ--------------YGE 311

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           D+ DL+      ++ E    +    F + +SV    +  A        N      +NE+ 
Sbjct: 312 DEIDLKPEWKRLHMVEAVKEATGVDFWQEMSVEEAQQHAADHGIEITKNMTVGHIINEFF 371

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
             + +  L    +     G+   + P+AK     
Sbjct: 372 EQKVEETLVQPTFIY---GHPVEISPLAKKNPED 402



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  +      +  P       K N        +++L     E A+     +  
Sbjct: 370 FFEQKVEET-LVQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVRREHANAFTELNDP 428

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +           A + GMPP GG+  GIDR++MLL  + ++R
Sbjct: 429 IDQRERFEAQLKEREEGNDEAHLMDDDFVEALEYGMPPTGGLGIGIDRLIMLLTNSPSIR 488

Query: 558 EVSLFPMSQNF 568
           +V LFP  +N 
Sbjct: 489 DVLLFPQMRNR 499


>gi|134046818|ref|YP_001098303.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|166225358|sp|A4G0V5|SYD_METM5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|132664443|gb|ABO36089.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 438

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 99/359 (27%), Positives = 150/359 (41%), Gaps = 26/359 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH   ++     G  V L GWVH +R  G + F+ +RD  G  Q V      D   F I
Sbjct: 9   RTHYSEEVIPEMDGQEVILMGWVHSIRALGKLAFVILRDREGTIQAVVPKQKVDEETFAI 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK +  E ++ I G V++      N     G  E+   +I +L+ A+        E+   
Sbjct: 69  AKKLGKEDIIAIRGKVVA------NEKAPKG-FEVIPIEIRVLNKADAPLPLDPSEKVAA 121

Query: 122 E-SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           E   R   RFLD+RR  +      R+ ++ S+R       F+E +TP L AS+ EG  + 
Sbjct: 122 EIDTRLDKRFLDIRRPKIQAIFKIRSEMLRSIRKTFADGGFVEVNTPKLVASATEGGTEL 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S   + +F  L Q+PQ YKQ++MA GFD+ F+IA  FR E+  + R   E   +D E
Sbjct: 182 FPISYFEKEAF--LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDTE 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEF------------SNGNTVSNNFLRICYDDAIRRYGT 288
           MSFV + D +  +E V+   + +              N       F +I Y +AI     
Sbjct: 240 MSFVNEKDAMAMLEKVVYNCYADIEYNRPQEIELLELNWEIPEKTFDKITYTEAIDIANA 299

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE-VWAIPAKGGGGNRAFCDRMNE 346
              ++     +    E  V  E      I          + +P K         D M +
Sbjct: 300 KGVEIEWGEDLSRAAERAVGDEMGGLYFITEWPTQTRPFYTLPHKHDNKVCKAFDLMYK 358



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 61/157 (38%), Gaps = 31/157 (19%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
            A   +  E+G          +I ++P                PF            +  
Sbjct: 313 AAERAVGDEMG-------GLYFITEWP------------TQTRPFYT--------LPHKH 345

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +     +DL+    EI+SG  R H  +++++  SN+G++     + F     AF+ GMP
Sbjct: 346 DNKVCKAFDLMYKELEISSGAQRVHKYDLLVENISNMGMNP----DSFETYLEAFKFGMP 401

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PH G   G DR  M+L    N+RE  LFP  +     
Sbjct: 402 PHAGWGLGADRFAMVLTAQDNIRECVLFPRDRQRLTP 438


>gi|295702317|ref|YP_003595392.1| lysyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294799976|gb|ADF37042.1| lysyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 494

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 74/384 (19%), Positives = 142/384 (36%), Gaps = 51/384 (13%)

Query: 5   RTHSC-------GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+         +L    +      V L+G +   R  G   F  ++D  G  Q+    
Sbjct: 34  RTHTSQQLISEYDELTKEQLEENEVPVSLAGRIMTKRGKGKAGFAHVQDLTGQIQLYVRK 93

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +   S  +  + G+      E +      G++ +  +   +L+ A   PLP 
Sbjct: 94  DAIGEEQYEIFSSVDIGDLVGV------EGVLFKTKVGELSIKVKDFTLLTKALR-PLPD 146

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +   K     R+RII SMR  +    ++E  TP++ + +
Sbjct: 147 KYHGLKDIEQRYRQRYLDLITNPESKQTFISRSRIIQSMRRYLDNHGYLEVETPMMHSIA 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 207 GGAAARPFVTHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP- 264

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  +++  ++ +  DI+   EN++  + +E      +            + R+   DAI
Sbjct: 265 EFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTTKIQYGNQEVDLTPEWTRLHMVDAI 324

Query: 284 RRYGTDKPDLRNPIIM---------HNVTEHFVH-----------SEFRVFSKILSVNPG 323
           ++Y          +             +TEH  +            E ++          
Sbjct: 325 KQYTGVDFWGETSVEEARALAKEHGVEITEHMQYGHIVNEFFEQKVEEQLIQPTFIYGHP 384

Query: 324 YEVWAIPAKGGGGNRAFCDRMNEW 347
            E+  +  K     R F DR   +
Sbjct: 385 VEISPLAKKNAEDPR-FTDRFELF 407



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 11/134 (8%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   EE+ I       +P  +    +      D       +++L     E A+     
Sbjct: 365 FFEQKVEEQLIQPTFIYGHPVEISP--LAKKNAEDPR--FTDRFELFIVAREHANAFTEL 420

Query: 499 HMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      + F      KE               A + GMPP GG+  GIDR+VMLL  A 
Sbjct: 421 NDPIDQRERFEAQLKEKEQGNDEAHEMDDDFIEALEYGMPPTGGLGIGIDRLVMLLTNAP 480

Query: 555 NVREVSLFPMSQNF 568
           ++R+V LFP  +  
Sbjct: 481 SIRDVLLFPHMRQR 494


>gi|326573293|gb|EGE23261.1| lysyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
 gi|326575808|gb|EGE25731.1| lysyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 507

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 98/578 (16%), Positives = 189/578 (32%), Gaps = 138/578 (23%)

Query: 7   HSCGDLGVS---------DVGSFV--RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           + CGDL            + G  +  +++G V   R      F+ I+D     Q+  +  
Sbjct: 50  NYCGDLQAQFDGVDKATIESGDKMYAKVAGRVMLNRGS----FIVIQDMTDRIQLYVDRK 105

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E  + ++S  +  I       +A         G + +  +  E+L+ +   PLP  
Sbjct: 106 GLPSETLELIKSLDLGDI------VAASGYIGRSGKGDLYVHLEAFELLTKSLR-PLPDK 158

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   ++++ R+LDL  +   +N    R +++  +R  +  E F+E  TP++     
Sbjct: 159 FHGLTDTEVKYRKRYLDLMVNEETRNTFAIRAKVVAGIRAFLTQERFMEVETPMMHVIPG 218

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   +   P E
Sbjct: 219 GASARPFVTHHNALDMQLY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGVSTRHNP-E 276

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  ++                      ++ +++   +     R+    A+   G+     
Sbjct: 277 FTMIEF---------------------YQAYADYKDLMALTERMLETLAMDILGS----- 310

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
                    T+     E   F       P  ++    A     +    D +N+       
Sbjct: 311 ---------TDVSYQGEVFSFK-----GPFKKITMFDAILEHNSDFSADDIND------- 349

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                                +AK +     + ++    +    +  F      K     
Sbjct: 350 ------------------REFLAKFVKDELKQEVKPSFGLGKLQTIVFEETVETKLRQ-- 389

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                                 +I ++P      E   +                 + ND
Sbjct: 390 --------------------PTFITEYP-----AETSPLA----------------RRND 408

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAF 529
                  ++++   G E+A+G    +      + F      K+  ++           A 
Sbjct: 409 TNPHVTDRFEMFIGGRELANGFSELNDPIDQAERFRAQVAEKDAGDDEAMHYDADFIEAL 468

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + G+PP  G   GIDR+VML   A ++R+V LFP  ++
Sbjct: 469 EYGLPPTAGEGIGIDRLVMLFADAASIRDVILFPHMRH 506


>gi|240103937|ref|YP_002960246.1| aspartyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239911491|gb|ACS34382.1| Aspartyl-tRNA synthetase (aspS) [Thermococcus gammatolerans EJ3]
          Length = 438

 Score =  215 bits (548), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 156/366 (42%), Gaps = 30/366 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            YRTH   ++     G  V+++GWV  V+  GGI FL +RD  GI Q+ A       EI 
Sbjct: 1   MYRTHYSSEITEELNGQRVKVAGWVWEVKDLGGIKFLWLRDREGIVQITAPKKKVDPEIF 60

Query: 63  K---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFGER 118
           K    + +E V+ ++G+V                 E+  +K+E+LS AE        G+ 
Sbjct: 61  KLIPKLNAEDVIAVEGIVNFTPK-------AKLGFEILPEKLEVLSRAETPLPLDPTGKV 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +     R   RF+D+RR  +      R+ +  ++R       FIE  TP + A++ EG  
Sbjct: 114 KAELDTRLDNRFMDVRRPEVMAIFKIRSSVFKAIRDFFHESGFIEIHTPKIIATATEGGT 173

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +        + +F A  Q+PQ YKQ++MASG DR ++IAP FR E+  + R   E + +D
Sbjct: 174 ELFPMKYFEKDAFLA--QSPQLYKQIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSID 231

Query: 239 MEMSFVE-QDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAIRR 285
            EM+F+E +++++  +E ++          N                 F R+ YD A+  
Sbjct: 232 AEMAFIESEEEVMELLERLVAHTINYVREHNAKELETLNFELEEPKLPFPRLSYDKALEI 291

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
                 ++     +    E  +              P Y ++  P++         D   
Sbjct: 292 LADLGKEIPWGEDIDTEGERLLGKYMMENENA----PLYFLYKYPSEAKPFYIMKYDEKP 347

Query: 346 EWARSQ 351
           E  R+ 
Sbjct: 348 EICRAF 353



 Score =  102 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 12/118 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF         +   D        +DL   G EI SGG R H  +V+++    
Sbjct: 330 KYPSEAKPFY--------IMKYDEKPEICRAFDLEYRGVEITSGGQREHRVDVLVEQIKE 381

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G++       F    +AF+ GMPPHGG   G +R++  +L   N+REV LFP  +  
Sbjct: 382 KGLNP----ESFEFYLKAFRYGMPPHGGFGLGAERLIKQMLDLPNIREVILFPRDRKR 435


>gi|194017974|ref|ZP_03056581.1| lysyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010311|gb|EDW19886.1| lysyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 499

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 68/335 (20%), Positives = 133/335 (39%), Gaps = 29/335 (8%)

Query: 2   HRY-RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
            RY R+H    +           + +  + V ++G +   R  G   F  I+D  G  Q+
Sbjct: 35  ERYDRSHQSAQIIAEYDEFSKEDLEEKSAQVTIAGRMMTKRGKGKAGFAHIQDLEGQIQI 94

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               DS   E  +  +S  +    G ++  +      N+  G++ + A   E+L+ A   
Sbjct: 95  YVRKDSVGEEAYELFKSSDL----GDIIGVTGAVFKTNV--GELSIKATSFEVLTKALR- 147

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           R++ R+LDL  +   K   + R++II SMR  + ++ ++E  TP +
Sbjct: 148 PLPDKYHGLKDVEQRYRQRYLDLIVNPESKQTFIMRSKIIQSMRRYLDSKGYLEVETPTM 207

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            +      AR F+          Y +  A + + + L+  G ++ ++I   FR+E   + 
Sbjct: 208 HSIPGGASARPFITHHNALDMPLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTR 266

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  +++  ++ +  DI+N  EN++  + EE     T+      I      +R   
Sbjct: 267 HNP-EFTMIELYEAYADYKDIMNLTENLIAHIAEEVLGTTTIQYGEDEIDLKPEWKRLHM 325

Query: 289 DKP-------DLRNPIIMHNVTEHFVHSEFRVFSK 316
            +        D    + +    +H       +   
Sbjct: 326 VEAVKEATGVDFWQEMSIEEAKQHAADHGIEITKN 360



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  +      +  P       K N        +++L     E A+     +  
Sbjct: 370 FFEQKVEET-LVQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVRREHANAFTELNDP 428

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +           A + GMPP GG+  GIDR++MLL  + ++R
Sbjct: 429 IDQRERFEAQLKEREEGNDEAHLMDDDFVEALEYGMPPTGGLGIGIDRLIMLLTNSPSIR 488

Query: 558 EVSLFPMSQNF 568
           +V LFP  +N 
Sbjct: 489 DVLLFPQMRNR 499


>gi|295694794|ref|YP_003588032.1| lysyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295410396|gb|ADG04888.1| lysyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 513

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 65/335 (19%), Positives = 134/335 (40%), Gaps = 29/335 (8%)

Query: 7   HSCGDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFE 60
           H  GD    ++      VR++G +   R HG   F  I D  G  Q+    D      ++
Sbjct: 62  HFAGDRSKEELEQEGLHVRVAGRIMTKRGHGKASFAHILDRSGQIQIYVRLDRVGEFAYQ 121

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +   +    ++ ++G V+  +          G++ + A ++E+L+ +   PLP       
Sbjct: 122 VFDMLDLGDIIGVEGEVLRTNR---------GEVTIFADRVELLTKSLR-PLPTKWHGLK 171

Query: 121 PESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
              +R+++R++DL  +   +   V R+RII  MR  +  + F+E  TP + + +   A  
Sbjct: 172 DVELRYRHRYVDLIVNPQVRETFVLRSRIIRVMRRFLDDQGFLEVETPTMQSVAGGAAAR 231

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
             V           +  A + + + L+  G +R ++I   FR+E   +   P EF  +++
Sbjct: 232 PFVTHHNALNMELYMRIAMELHLKRLIVGGLERVYEIGRVFRNEGISTKHNP-EFTMMEL 290

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  D+++  EN++  +  E      +      +      RR             M
Sbjct: 291 YQAYADFRDMMDLTENLIVTIAREVLGTTQIQYQGQAVDLTPPWRRE-----------SM 339

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
            ++ +H+   +FR  S         E   +    G
Sbjct: 340 MDLIQHYTGIDFRQVSGTEQARELAENCGVKIDPG 374



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 61/155 (39%), Gaps = 6/155 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+  G+      EF  I++   +E  + E+ +      +  P       K +     
Sbjct: 361 RELAENCGVKIDPGMEFGHIVN-ECFEQ-KVEQHLVQPTFVYGYPVEISPLAKRSAADPR 418

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAF----SNVGISKEVVENRFGGLYRAFQCGM 533
              +++L   G E A+     +      + F           +           A + GM
Sbjct: 419 LTDRFELFIVGREHANAFSELNDPVDQRKRFLDQLEERAKGNDEAHEMDEDFVMALEYGM 478

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PP GG+  G+DR+VMLL    ++R+V LFP+ ++ 
Sbjct: 479 PPTGGLGIGVDRLVMLLTDQASIRDVLLFPLMRDR 513


>gi|50119719|ref|YP_048886.1| lysyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81646128|sp|Q6D945|SYK_ERWCT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|49610245|emb|CAG73688.1| lysyl tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 505

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 64/284 (22%), Positives = 122/284 (42%), Gaps = 19/284 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + ++G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L  
Sbjct: 61  LEELGIEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              D        R+ ++ ++R  M+   F+E  TP++        AR F+          
Sbjct: 175 IANDDSRNTFRIRSNVMAAIRRFMVDNGFMEVETPMMQVIPGGASARPFITHHNALDIDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIV 292

Query: 252 TMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY 286
             EN+ R + ++                   F ++   +AI +Y
Sbjct: 293 LTENLFRTLTQDVLGSTTVVYGDQTFDFGKPFDKLTMREAICKY 336



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 8/151 (5%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLS 476
             IA  LGI     +    I+    +E   E   I       T     +  L + ND  S
Sbjct: 352 TAIALSLGIKIEKSWGLGRIV-TEIFEETAESSLIQPTF--ITEYPAEVSPLARRNDQNS 408

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCG 532
               +++    G EI +G    + +E   + F+    +K+  ++           A + G
Sbjct: 409 EITDRFEFFIGGREIGNGFSELNDAEDQAERFAQQVNAKDAGDDEAMFYDEDYVTALEHG 468

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 469 LPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|83815569|ref|YP_445945.1| asparaginyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83756963|gb|ABC45076.1| asparaginyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 544

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 100/556 (17%), Positives = 168/556 (30%), Gaps = 75/556 (13%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---IAKSVRSEWV 70
              V   V L GW+H  R  GGI FL +RD  G  Q V   D+   +   +A  VR E  
Sbjct: 54  ADHVDETVTLKGWLHNQRGSGGIKFLILRDGSGFVQCVVPQDAVDADSWAVADDVRQEAA 113

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L I G V +            G  EL    +E +  + + P+     +E+      ++R 
Sbjct: 114 LEITGSVSADER-------APGGYELQVDAVERIGESGDYPVTP---KEHGIDFLMEHRH 163

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR ++    +  R RI  ++        F++   PILT ++ EG          +  S
Sbjct: 164 LWLRSESQWAVMRIRNRIETAIHEFFQERGFLQTDAPILTGNAVEGTSTLFDLDYFDDES 223

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q+ Q +    MA  + + +   P FR E   + R   EF+ ++ EM+F + +   
Sbjct: 224 AY-LTQSGQLH-GEAMAMAYGKVYTFGPTFRAEKSATRRHLTEFWMIEPEMAFYDLEMNA 281

Query: 251 NTMENVLRGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
              E+ +  + +    +         R             +      + +    E     
Sbjct: 282 QLAEDFVAHIVQAVLEDCEEELEALDRDTSALEQVETPFPRISYDEAVELLRSDETAEMI 341

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
           + R+ +         E         G  +    R  +    +       I  R+DE    
Sbjct: 342 DERIEALNEEKAELLEEKEENQTRRGQAKKHVKRKIDAREIE-------INKRVDEIEEA 394

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
               P  K      T          D     +    P+                      
Sbjct: 395 LRNLPDWK--ESAQTFEWGSDFGGDDETVLTWHFDRPVIVHR------------------ 434

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
                     FP                 F M +   +           A   D++    
Sbjct: 435 ----------FP------------AEIKAFYMKRDPDDDRL--------AMGIDVLAPEG 464

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
                G     +++                + F       + G  PH G   G++R V  
Sbjct: 465 YGEIIGGGERATDLDFLKEQIEAHDLPE--DVFDWYLDLRKFGSVPHSGFGLGLERTVSW 522

Query: 550 LLGAKNVREVSLFPMS 565
           + G  +VRE   FP +
Sbjct: 523 ITGRDHVRETIPFPRT 538


>gi|319949732|ref|ZP_08023760.1| lysyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319436597|gb|EFV91689.1| lysyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 543

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 105/594 (17%), Positives = 197/594 (33%), Gaps = 135/594 (22%)

Query: 5   RTHSCGDLGVS------DVGSF----VRLSGWVHRVRPHGGIIFLDIRDH---------- 44
           RTH   ++         + G      V ++G V  +R  G + F+ ++D           
Sbjct: 48  RTHGLAEIASDPRFAALEPGEETDVVVSVAGRVLFIRNTGKLCFVRLQDGVDPSADLSTP 107

Query: 45  -----YGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSA 98
                 G          +   + +     W   +D G  +S +   + +    G++ + A
Sbjct: 108 VPEGESGPLTPQLQAMLSLANVGQERLDAWKQDVDLGDHVSVTGRVVRSK--RGELSVMA 165

Query: 99  QKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMI 157
            +  +   A+ L       +E  E  R + R+ DL  RDT  +N + R +++ ++R  + 
Sbjct: 166 DEWVL--AAKALRPLPVAHKELSEDTRVRQRYTDLIMRDTARRNALTRIKVVRALRDALE 223

Query: 158 AENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216
              F+E  TP+L        AR F+  S       Y L  AP+ Y +  +  G +R F+I
Sbjct: 224 KRGFLEVETPMLQTLHGGAAARPFVTHSNALGLDLY-LRIAPELYLKRCVVGGIERVFEI 282

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
              FR+E   S   P EF  L+   ++ + D     +  V++ V        T       
Sbjct: 283 NRNFRNEGVDSSHSP-EFAMLETYQAYGDYDTSATMIREVIQEVATAVFGSTT------- 334

Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
                               + + + TE+ +  ++R            E+   P+     
Sbjct: 335 --------------------VTLADGTEYELGGQWR------------EMRMYPSLNEAL 362

Query: 337 NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
            R   +     A +                        V    ++     +  ++ ++  
Sbjct: 363 QRKHPELATAGAET------------------------VTVDTSVAELTELAGKVGLEVP 398

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
               ++ G               + + L           ++ DFP               
Sbjct: 399 SGKGWLHGK----------LVEELWEHLCADQLEG--PVFVRDFP------------VET 434

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +P T         + +        ++DL   GFE+A+G        +  Q F +      
Sbjct: 435 SPLT---------RDHRTDRGVTEKWDLYVRGFELATGYSELVDPVIQRQRFEDQARLAA 485

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             ++           A + GMPP  G+  GIDR++M L G   +RE  LFPM +
Sbjct: 486 AGDDEAMVLDEDFLAAMEQGMPPTTGLGMGIDRLLMALTGLG-IRETILFPMVK 538


>gi|294496950|ref|YP_003560650.1| lysyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294346887|gb|ADE67216.1| lysyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 494

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 74/384 (19%), Positives = 142/384 (36%), Gaps = 51/384 (13%)

Query: 5   RTHSC-------GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+         +L    +      V L+G +   R  G   F  ++D  G  Q+    
Sbjct: 34  RTHTSQQLISEYDELTKEQLEENEVPVSLAGRIMTKRGKGKAGFAHVQDLTGQIQLYVRK 93

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +   S  +  + G+      E +      G++ +  +   +L+ A   PLP 
Sbjct: 94  DAIGEEQYEIFSSVDIGDLVGV------EGVLFKTKVGELSIKVKDFTLLTKALR-PLPD 146

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +   K     R+RII SMR  +    ++E  TP++ + +
Sbjct: 147 KYHGLKDIEQRYRQRYLDLITNPESKQTFISRSRIIQSMRRYLDNHGYLEVETPMMHSIA 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 207 GGAAARPFVTHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP- 264

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  +++  ++ +  DI+   EN++  + +E      +            + R+   DAI
Sbjct: 265 EFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTTKIQYGDQEVDLTPEWTRLHMVDAI 324

Query: 284 RRYGTDKPDLRNPIIM---------HNVTEHFVH-----------SEFRVFSKILSVNPG 323
           ++Y          +             +TEH  +            E ++          
Sbjct: 325 KQYTGVDFWGETSVEEARALAKEHGVEITEHMQYGHIVNEFFEQKVEEQLIQPTFIYGHP 384

Query: 324 YEVWAIPAKGGGGNRAFCDRMNEW 347
            E+  +  K     R F DR   +
Sbjct: 385 VEISPLAKKNAEDPR-FTDRFELF 407



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 72/197 (36%), Gaps = 13/197 (6%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
                 +       +   D+     G      +   +AR  +A+E G+      ++  I+
Sbjct: 304 YGDQEVDLTPEWTRLHMVDAIKQYTGVDFWGETSVEEAR-ALAKEHGVEITEHMQYGHIV 362

Query: 439 DFPFYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           +  F+E   EE+ I       +P  +    +      D       +++L     E A+  
Sbjct: 363 N-EFFEQKVEEQLIQPTFIYGHPVEISP--LAKKNAEDPR--FTDRFELFIVAREHANAF 417

Query: 496 IRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
              +      + F      KE               A + GMPP GG+  GIDR+VMLL 
Sbjct: 418 TELNDPIDQRERFEAQLKEKEQGNDEAHEMDDDFIEALEYGMPPTGGLGIGIDRLVMLLT 477

Query: 552 GAKNVREVSLFPMSQNF 568
            A ++R+V LFP  +  
Sbjct: 478 NAPSIRDVLLFPHMRQR 494


>gi|38234551|ref|NP_940318.1| lysyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|38200814|emb|CAE50518.1| Putative lysyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 520

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 107/588 (18%), Positives = 192/588 (32%), Gaps = 140/588 (23%)

Query: 5   RTHSCGDLGV----------------------SDVGSFVRLSGWVHRVRPHGGIIFLDIR 42
           RTHS  +L                         D G  V ++G    +R  G + F  ++
Sbjct: 38  RTHSITELREKFAAVPEGEKGDKPGVTYLEPGEDSGVEVAITGRALFIRNTGKLCFAALQ 97

Query: 43  DHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKI 101
           +  G          +  E+ +   + W   +D G ++S     + +    G++ +     
Sbjct: 98  EGNG---EYMQAMLSLAEVGEESLASWKADVDLGDIVSIRGTVVASK--RGELSVMVNSW 152

Query: 102 EILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAEN 160
            + S +       F   +  E +R ++R+ DL      + N + R +++ ++R  +  ++
Sbjct: 153 HMASKSLRPLPVAFA--DMSEDMRIRHRYTDLIMREQARTNAMTRIKVMRALRHYLEGQD 210

Query: 161 FIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
           F+E  TP+L        AR F+  S       Y L  AP+ Y +  +  G +R F++   
Sbjct: 211 FMEVETPMLQTLHGGAAARPFVTHSNALDIDLY-LRIAPELYLKRCVVGGIERVFEVNRN 269

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           FR+E   S   P EF  L+   ++   DD    ++ +++ V  E     T          
Sbjct: 270 FRNEGVDSSHSP-EFAMLETYQAWGTYDDGAKMIQELIQSVAMEVFGSTT---------- 318

Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
                            + + + TE+ +  E++      S+N                R 
Sbjct: 319 -----------------VTLVDGTEYDLGGEWKTIEMYPSLNE------------ALTRK 349

Query: 340 FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC 399
           F           GQP                    V     +   +AI   + +      
Sbjct: 350 F----------PGQPE-------------------VTIDSTVDELKAIAAVIGLDV---- 376

Query: 400 FFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF 459
                 P K           I + L       +   ++ DFP               +P 
Sbjct: 377 ------PAKGGWGHGKLVEEIWEHLC--EDQLYGPIFVRDFP------------VETSPL 416

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
           T                    ++DL   GFE+A+G        +  + F +        +
Sbjct: 417 TRQHRS---------KPGVTEKWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGD 467

Query: 520 NRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +           A + GMPP  G   GIDR++M L G   +RE  LFP
Sbjct: 468 DEAMVLDEDFLAAMEQGMPPTAGCGMGIDRLLMALTGLG-IRETVLFP 514


>gi|117617708|ref|YP_857858.1| lysyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|166229790|sp|A0KNK7|SYK_AERHH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|117559115|gb|ABK36063.1| lysyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 511

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 71/299 (23%), Positives = 124/299 (41%), Gaps = 26/299 (8%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            S  +L    +G  V+++G +   R  G   F  ++D  G  QV    D           
Sbjct: 57  KSADELAA--LGKRVKIAGRIMTRRIMGKASFATLQDMAGKIQVYVTRDDLPEGFYNEQF 114

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            +W L   G ++         N  TG++ +    I +L+ A   PLP   +    +  R 
Sbjct: 115 KKWDL---GDIVGVEGTLFRTN--TGELSVHVSDIRLLTKALR-PLPEKHKGLTDQEARC 168

Query: 127 KYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+LDL   +   K  V RT+++  +R  +  + F+E  TP++        AR F+   
Sbjct: 169 RQRYLDLIANEESRKTFVTRTKVVAGIRKFLNDKRFMEVETPMMQVIPGGASARPFITHH 228

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  GF+R ++I   FR+E   S R   EF  L+  M++ 
Sbjct: 229 NALDIDMY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGI-SVRHNPEFTMLEFYMAYA 286

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSN--------------NFLRICYDDAIRRYGTD 289
           +  D+++  E +LR + ++      +                 F R+   D+I +Y  D
Sbjct: 287 DYIDLMDLTEEMLRTLAQDILGDTKIRYAKEGEEGLTIDFGQPFQRLSMVDSILKYNPD 345



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YR 527
           ND       +++    G E+A+G    + +E   + F      K   ++           
Sbjct: 410 NDQNPDVTDRFEFFIGGRELANGFSELNDAEDQAERFQAQVDQKAAGDDEAMFYDADFVT 469

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G+PP  G   GIDR+VML   +  +R+V LFP
Sbjct: 470 ALEHGLPPTAGQGIGIDRLVMLFTNSHTIRDVILFP 505


>gi|304414310|ref|ZP_07395678.1| Lysyl-tRNA synthetase (class II) [Candidatus Regiella insecticola
           LSR1]
 gi|304283524|gb|EFL91920.1| Lysyl-tRNA synthetase (class II) [Candidatus Regiella insecticola
           LSR1]
          Length = 504

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 72/305 (23%), Positives = 129/305 (42%), Gaps = 23/305 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      DL   D+   V+++G +   R  G   F+ ++D  G  Q+    D    E 
Sbjct: 51  EQYDNKDNDDLSKLDI--KVKVAGRMMTRRIMGKASFVTLQDAGGCIQLYVERDHLPKEF 108

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                 +W L   G ++            TG++ +   ++ +L+ A   PLP        
Sbjct: 109 YNEKFKKWDL---GDILGAQGTLF--KTKTGELSIRCTELRLLTKALR-PLPDKFHGLAD 162

Query: 122 ESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
           + + ++ R+LDL  +   +     R+++I  MR  M+ + F+E  TP++        AR 
Sbjct: 163 KEMCYRQRYLDLIVNEEARRTFKIRSQLIAGMRQFMVDKGFMEVETPMMQVIPGGAVARP 222

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S   P EF  +++
Sbjct: 223 FITHHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLSSRHNP-EFTMMEL 280

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY--GT 288
            M++ +  D++   E + R + +     N           +  F R+   +AI +Y    
Sbjct: 281 YMAYADYRDLMKLTEELFRTLTQTVLGSNIITYGDNTFDFAKPFARLTMKEAICQYCSQI 340

Query: 289 DKPDL 293
           D PDL
Sbjct: 341 DAPDL 345



 Score = 94.7 bits (234), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 51/298 (17%), Positives = 91/298 (30%), Gaps = 23/298 (7%)

Query: 275 LRICYDDA--IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
             I + +A  I  Y    P+L    ++    E          ++ LS     E   +   
Sbjct: 222 PFITHHNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGLSSRHNPEFTMMELY 281

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
               +     ++ E         +                 P A+            ++D
Sbjct: 282 MAYADYRDLMKLTEELFRTLTQTVLGSNIITYGDNTFDFAKPFARLTMKEAICQYCSQID 341

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
             D D         +K        +      LG I C  FE               E+ +
Sbjct: 342 APDLDK----MDKAVKIAQSLG-IKIDKNWGLGRIQCEIFE------------ATAEEHL 384

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
                    P       + ND   +   +++    G EI +G    + +E   + F    
Sbjct: 385 VQPTFITEYPAEVSPLARRNDDNPLITDRFEFFIGGREIGNGFSELNDAEDQAERFDAQV 444

Query: 513 ISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            ++   ++           A + GMPP  G+  GIDR+VML   + ++R+V LFP  +
Sbjct: 445 KARTGGDSEAMFYDKDYVTALEHGMPPTAGLGIGIDRMVMLFTNSHSIRDVILFPAMR 502


>gi|18977241|ref|NP_578598.1| aspartyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|22257052|sp|Q8U2G6|SYD_PYRFU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|18892906|gb|AAL80993.1| aspartyl tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 438

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 94/384 (24%), Positives = 158/384 (41%), Gaps = 33/384 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RTH   ++     G  V+++GWV  V+  GGI F+ IRD  GI Q+ A       EI K 
Sbjct: 3   RTHYSNEITEELNGKRVKVAGWVQEVKDLGGIKFVWIRDREGIVQITAPKKKVSEEIFKL 62

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFGEREY 120
              + SE V+ ++G+V                 E+  +K EIL+  +        G+ + 
Sbjct: 63  IPKLNSEDVVVVEGIVNFTPK-------AKLGFEIIPEKFEILNRTQTPLPLDPTGKVKA 115

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RF+DLR   +      R+ +  ++R     E FIE  TP + A++ EG  + 
Sbjct: 116 ELDTRLDNRFIDLRNPKVMAIFKIRSNVFRAIREFFYNEGFIEIHTPKIIATATEGGTEL 175

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                    +F A  Q+PQ YKQ++MA+G D+ F+ AP FR E+  + R   E + +D E
Sbjct: 176 FPIKYFENDAFLA--QSPQLYKQIMMATGLDKVFETAPIFRAEEHNTTRHLNEAWSIDAE 233

Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAIRRYG 287
           ++F+E  +++++ +EN++          N                 F R+ YD A+    
Sbjct: 234 IAFIENEEEVMDVLENLVVYAINYVREHNERELKILEFELEEPKQPFPRVTYDKALEILS 293

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
               ++          E       ++  K +S N G E++ I          +  + +E 
Sbjct: 294 DLGKEIPWG-------EDIDTEGEKLLGKYMSENEGVELYFIYKYPSEAKPFYIMKYDEK 346

Query: 348 ARSQGQPGLAYIFWRLDESGNVAG 371
                   L Y    +   G    
Sbjct: 347 PEICRAFDLEYRGIEISSGGQREH 370



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 12/118 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF         +   D        +DL   G EI+SGG R H  EV+L+    
Sbjct: 330 KYPSEAKPFY--------IMKYDEKPEICRAFDLEYRGIEISSGGQREHRYEVLLEQIKE 381

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G++       F    +AF+ GMPPHGG   G +R++M +L   N+REV LFP  +  
Sbjct: 382 KGLNP----ESFEFYLKAFKYGMPPHGGFGLGAERLIMRMLNIGNIREVILFPRDRKR 435


>gi|253580947|ref|ZP_04858209.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847789|gb|EES75757.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 678

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 70/402 (17%), Positives = 144/402 (35%), Gaps = 28/402 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +I+D  G  QV    D+   +     +   +  I GL    
Sbjct: 96  VAIAGRMMFKRVMGKASFCNIQDLQGNIQVYVARDAIGADSYADFKKSDIGDIFGL---- 151

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E       TG+I + A+ + +LS + ++ LP          +R++ R++DL  +   K
Sbjct: 152 --EGFAFRTRTGEISIHAESMTLLSKSLQI-LPEKFHGLTDTDMRYRQRYVDLIMNQDSK 208

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           N  +KR++I+  +R  +   +F+E  TP+L A++   A                L  + +
Sbjct: 209 NVFIKRSQILKEIRNFLADRDFMEVETPMLVANAGGAAARPFETHYNALNEDVKLRISLE 268

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++   E++ R 
Sbjct: 269 LYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMELTESMFRY 327

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           + E+                  A   Y   + DL  P     + +         F ++  
Sbjct: 328 LAEKVCG--------------SAKISYNGIEIDLSKPFERLTMNDAIKKYAGIDFDEVAD 373

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM-----GP 374
                ++               D +N +     +  L    + +D    ++ +       
Sbjct: 374 DEAAKKLADEHHIEYEERHKKGDIINLFFEEYCEKELIQPTFIMDHPIEISPLTKKKPSD 433

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
             K              +     +      +  K     ADA
Sbjct: 434 PNKVERFELFINTWEMCNAYSELNDPIDQRERFKAQDALADA 475



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 80/206 (38%), Gaps = 13/206 (6%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
            V G   ++ +   ++      RL M D    +            AA     +A E  I 
Sbjct: 331 KVCGSAKISYNGIEIDLSKPFERLTMNDAIKKYAGIDFDEVADDEAAK---KLADEHHIE 387

Query: 428 NCNCFEFCWIMDFPFYEWNEEE--KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
                +   I++  F E+ E+E  +      +P  +    +   K +D   +   +++L 
Sbjct: 388 YEERHKKGDIINLFFEEYCEKELIQPTFIMDHPIEISP--LTKKKPSDPNKV--ERFELF 443

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAA 541
            N +E+ +     +      + F       +  +            A + GMPP GGI  
Sbjct: 444 INTWEMCNAYSELNDPIDQRERFKAQDALADAGDEEANHTDEDFLNALEIGMPPTGGIGY 503

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           GIDR+VMLL  ++ +R+V LFP  ++
Sbjct: 504 GIDRLVMLLTDSQAIRDVLLFPTMKS 529


>gi|322830587|gb|EFZ33557.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 495

 Score =  215 bits (547), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 106/554 (19%), Positives = 183/554 (33%), Gaps = 71/554 (12%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R+ G V   R  G I F+ +R     +  V    +      K +  E ++   G ++   
Sbjct: 9   RIRGRVETTRIRGKIAFIHLRQPPCHSIQVVASAADIVRRVKELTPESIIDATGTLVPAE 68

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
               +A+      EL A++++++S A         +       R  +R +D+R       
Sbjct: 69  RPVTSASCKN--YELHAERVDVVSRAATPLPFPIKDCNTRLDTRLNHRVMDMRTPLTASV 126

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +   + +    R +++A +F+E  TP +  ++ EG           Q  + A  Q+PQ Y
Sbjct: 127 LRLVSAVCQCFRKQLLARDFVEIHTPKMLGAASEGGSAVFTIDYFGQRGYLA--QSPQLY 184

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQ+++     R F+I P FR E   + R   EF  LD E               V+   +
Sbjct: 185 KQMVLMGDAMRVFEIGPVFRAEKSLTHRHLTEFVGLDAEF--------------VIEHSY 230

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL-RNPIIMHNVTEHFVHSEFRVFSKILSV 320
            E  +        L       I     D   L R         +    S   +       
Sbjct: 231 TEVLDV-------LESTVCAMIDHLQEDHAALVRQARESLADMDAAEGSPSALGRNQEKE 283

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARS---QGQPGLAYIFWRLDESGNVAGMGPVAK 377
                        G       D       +    G+ G+  I     ++       P   
Sbjct: 284 EASIVCELSEETFGAFGCLTTDATEAHLTTDCYHGRVGVGSI-----DAQRRNPRQPKVL 338

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
            L   +   + +   + D     F      +        R     ++ II+         
Sbjct: 339 RLTFDDAVRLLLDHHVVDQPPTDFTLPQERRIGEL---VRERYGVDVYIIDQ-------- 387

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
             FP                PF            +   +     +D+   G EI SG  R
Sbjct: 388 --FPL------------TARPFYT--------LPHPHKTESTCSFDMYLRGEEICSGAQR 425

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            H   ++LQ    + +    +++       AF+ G  PHGG   G++RIV+ LLGAK++R
Sbjct: 426 IHDITLLLQNMERLQVDVASLKD----YVDAFRYGAWPHGGFGLGLERIVLFLLGAKDIR 481

Query: 558 EVSLFPMSQNFCDL 571
           ++SLFP        
Sbjct: 482 QISLFPRDPKRLAP 495


>gi|268591698|ref|ZP_06125919.1| lysine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291312657|gb|EFE53110.1| lysine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 505

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 76/358 (21%), Positives = 141/358 (39%), Gaps = 35/358 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   +  +L   D+   V ++G +   R  G   F  ++D  G  Q+  + D     I 
Sbjct: 51  QYDDKTSEEL--EDLNIEVSIAGRMMTRRIMGKASFATLQDVGGRIQIYVSRDDLAEGIY 108

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
                +W L   G ++            TG++ +   ++ +L+ A   PLP        +
Sbjct: 109 NEQFKKWDL---GDILGAKGRLF--KTKTGELTVHCHEVRLLTKALR-PLPDKFHGLSDQ 162

Query: 123 SIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL   D      + R++I+  +R  M++  F+E  TP++        AR F
Sbjct: 163 ETRYRQRYLDLIANDESRHTFIVRSKILAEVRNFMVSYGFMEVETPMMQVIPGGASARPF 222

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ 
Sbjct: 223 VTHHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNPEFTMMELY 280

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M++ +  D++   E++ R + ++                   + +YG  + D   P    
Sbjct: 281 MAYADYRDLIALTEDLFRTLTQKVLGNT--------------VVQYGEQEFDFGKPFTKM 326

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351
            + E          + +  ++   +  AI         K  G  R  C+   E A S 
Sbjct: 327 TMKEAICKYRPE--TNVADLDDMDKAVAIAQSIGIKIEKSWGLGRVQCEIFEEVAESH 382



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 74/233 (31%), Gaps = 22/233 (9%)

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
              R       +  R+  Q  L     +  E        P  K          R   ++ 
Sbjct: 284 ADYRDLIALTEDLFRTLTQKVLGNTVVQYGEQ-EFDFGKPFTKMTMKEAICKYRPETNVA 342

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
           D D       D     + +   +   +  LG + C  FE               E  +  
Sbjct: 343 DLDDM-----DKAVAIAQSIGIKIEKSWGLGRVQCEIFEEV------------AESHLIQ 385

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
                  P       + ND       +++    G EI +G    + +E   + F+     
Sbjct: 386 PTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAERFAEQVRQ 445

Query: 515 KEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           K+  ++           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 446 KDEGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 498


>gi|154684600|ref|YP_001419761.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|154350451|gb|ABS72530.1| LysS [Bacillus amyloliquefaciens FZB42]
          Length = 499

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 62/303 (20%), Positives = 123/303 (40%), Gaps = 18/303 (5%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F  ++D  G  Q+    DS   E  +  +S  +    G V+ 
Sbjct: 64  EVTIAGRMMTKRGKGKAGFAHLQDLEGQIQIYVRKDSVGEEQYEIFKSSDL----GDVIG 119

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
            + +    N+  G++ + A   E+L+ A   PLP           R++ R+LDL  +   
Sbjct: 120 ITGKVFKTNV--GELSVKATSFELLTKALR-PLPDKYHGLKDVEQRYRQRYLDLIVNPDS 176

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
           K   + R++II +MR  +    ++E  TP + +      AR F+          Y +  A
Sbjct: 177 KQTFITRSKIIQAMRRYLDDHGYLEVETPTMHSIPGGASARPFITHHNALDMPLY-MRIA 235

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++  EN++
Sbjct: 236 IELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDIMSLTENLV 294

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP-------DLRNPIIMHNVTEHFVHSE 310
             + +E     T+     +I      +R             D  N + +     H     
Sbjct: 295 AHIAQEVLGSTTIQYGEEQIDLKPEWKRLHMVDAVKEATGVDFWNEMTVEEARGHAKEHG 354

Query: 311 FRV 313
             +
Sbjct: 355 IEI 357



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 73/205 (35%), Gaps = 11/205 (5%)

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
             +G           +       +   D+     G          +AR H A+E GI   
Sbjct: 300 EVLGSTTIQYGEEQIDLKPEWKRLHMVDAVKEATGVDFWNEMTVEEARGH-AKEHGIEIT 358

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCN 487
           N      I++  F+E   EE  I      F       +  L   +    +   +++L   
Sbjct: 359 NSMTVGHIIN-EFFEQKIEETLIQPT---FIYGHPVEISPLAKKNPEDPRFTDRFELFIV 414

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGI 543
           G E A+     +      + F      +E   +           A + GMPP GG+  GI
Sbjct: 415 GREHANAFTELNDPIDQRERFEAQLKEREEGNDEAHMMDEDFVEALEYGMPPTGGLGIGI 474

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNF 568
           DR+VMLL  A ++R+V LFP  +  
Sbjct: 475 DRLVMLLTNAPSIRDVLLFPQMRQR 499


>gi|254166888|ref|ZP_04873742.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596142|ref|YP_003482838.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624498|gb|EDY37059.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289533929|gb|ADD08276.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 428

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 92/363 (25%), Positives = 151/363 (41%), Gaps = 21/363 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+  +      G  V++ GW+H +R  G I F+ +RD YG  Q+         E  K 
Sbjct: 3   RTHTTKE-AAQLDGEEVKVCGWIHDIRVLGKIAFIILRDRYGFAQLTLIRSIVGKEKFKE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPES 123
               +       V+    +           E+  ++IE+L+ AE      V  +      
Sbjct: 62  ----YTKLTRESVICAKGKVQKTKQAKLGFEILPEEIEVLNRAESPLPLGVADKVSADLE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R + RFLDLR+  +      R+ I+  +R  ++ +NF+E  TP + A++ EG  +    
Sbjct: 118 TRIENRFLDLRKREVLAVFEIRSTILQGIREYLLNQNFVEVHTPKIVATATEGGTELFPV 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++  L Q+PQ YKQ+LMA+G DR  ++AP FR E+  + R   EF  +D+EMSF
Sbjct: 178 KYFEKDAY--LNQSPQLYKQVLMAAGLDRVLEVAPAFRAEEHNTTRHLNEFISIDIEMSF 235

Query: 244 VEQDDILNTMENVLRGVFEEF------------SNGNTVSNNFLRICYDDAIRRYGTDKP 291
            +++D +  +E  +    ++              N    S  F RI YD+A+        
Sbjct: 236 ADEEDAMYMLEGSIVNAIKKLKEERKEEMEILGMNWEVPSLPFKRITYDEALEIVRKKGI 295

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           D+             + SE + F  I    P           G  + AF     E   + 
Sbjct: 296 DMEWGEDFSTEALKALGSELQEFYFITRW-PMEIKPFYVLPDGKYSHAFDLMYGEREITS 354

Query: 352 GQP 354
           G  
Sbjct: 355 GAQ 357



 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 27/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I  +P                PF +   G             +  +DL+    EI 
Sbjct: 317 EFYFITRWPM------------EIKPFYVLPDGKY-----------SHAFDLMYGEREIT 353

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  RNH+ E +++   + G++       F    RAF+ GMPPH G   G++R+VM++ G
Sbjct: 354 SGAQRNHVYESLVEVMRSKGLNP----ENFEYYLRAFRYGMPPHAGWGLGLERLVMIITG 409

Query: 553 AKNVREVSLFPMSQNF 568
            KN+RE  +FP  +  
Sbjct: 410 VKNIRECVIFPRDRTR 425


>gi|296131772|ref|YP_003639019.1| lysyl-tRNA synthetase [Thermincola sp. JR]
 gi|296030350|gb|ADG81118.1| lysyl-tRNA synthetase [Thermincola potens JR]
          Length = 489

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 64/285 (22%), Positives = 118/285 (41%), Gaps = 14/285 (4%)

Query: 5   RTHSCGDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH   ++  +     G  V L+G +   R  G   F +I+D  G  Q+    D    E 
Sbjct: 35  RTHLTKEVIENFDRLEGQEVTLAGRLMAKRGQGKAGFSNIQDLTGRIQLYTRLDDLGEEE 94

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K      +  I G+               G+I +  +  ++L  +   PLP        
Sbjct: 95  FKRFSHLDIGDIIGVTGKV------FKTQKGEISIWVKSYKLLCKSLR-PLPEKWHGLKD 147

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
             +R++ R++DL  +   K   V R++II ++R  +    F+E  TP++   +    AR 
Sbjct: 148 VELRYRQRYIDLIVNPEVKEVFVTRSKIIRAIRNYLDKLGFLEVETPMMHPIAGGATARP 207

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  G ++ ++I   FR+E   +   P EF  L++
Sbjct: 208 FITHHNALDMDLY-LRIAPELYLKRLIVGGLEKVYEINRNFRNEGISTKHNP-EFTMLEL 265

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
             ++ + +D++   EN++  V +E    + +      I      R
Sbjct: 266 YEAYADYEDMMVLTENLVSTVAKEVLGTDKIVYQGTEIDLAAPWR 310



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 4/95 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
               ++++      E A+     +      + F      +   ++           A Q 
Sbjct: 392 PAYTYRFEAFIYSRETANAFSELNDPIDQEERFRKQVEKRAKGDDEAHMMDEDYINALQI 451

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP GG+  GIDR+VMLL  + ++R+V LFP+ +
Sbjct: 452 GLPPTGGLGIGIDRLVMLLTDSASIRDVLLFPLMR 486


>gi|292487147|ref|YP_003530017.1| lysyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|291552564|emb|CBA19609.1| lysyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 506

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 72/338 (21%), Positives = 141/338 (41%), Gaps = 19/338 (5%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           ++G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L   G
Sbjct: 63  ELGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL---G 119

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  
Sbjct: 120 DILGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIA 176

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           +   +N  K R++I+  +R  M+  +F+E  TP++ A      AR F+          Y 
Sbjct: 177 NDDSRNTFKVRSQIMAGIRNFMVGRDFMEVETPMMQAIPGGASARPFITHHNALDLDMY- 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  +++ M++ + +D++   
Sbjct: 236 LRIAPELYLKRLVVGGFDRVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYEDLIELT 294

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           E++ R + +       V     +  +     +    +  L+      ++ +     +   
Sbjct: 295 ESLFRTLAQNVLGSTLVPYGDQQFDFGQPFAKLTMKEAILKY-RPQTDLADLADFDKSVA 353

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
            ++ L +N          K  G  R   +   E A+  
Sbjct: 354 IAQSLGIN--------VEKSWGLGRVVTEIFEETAKEH 383



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 6/156 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IAQ LGI     +    ++    +E   +E  +         P       + ND+   
Sbjct: 352 VAIAQSLGINVEKSWGLGRVV-TEIFEETAKE-HLIQPTFITEYPAEVSPLARRNDVDPE 409

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGM 533
              +++      EI +G    + ++   + F     +K+  ++           A + G+
Sbjct: 410 ITDRFEFFIGDREIGNGFSELNDAQDQAERFLQQVNAKDAGDDEAMFYDEDYVTALEHGL 469

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           PP  G+  GIDR+VML   +  +R+V LFP  +   
Sbjct: 470 PPTAGLGIGIDRMVMLFTNSHTIRDVILFPALRPGS 505


>gi|291520197|emb|CBK75418.1| Lysyl-tRNA synthetase (class II) [Butyrivibrio fibrisolvens 16/4]
          Length = 681

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 64/332 (19%), Positives = 129/332 (38%), Gaps = 23/332 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +IRD  G  QV    D+   E     +   +  I G+    
Sbjct: 98  VSIAGRMMFKRVMGKASFCNIRDRKGDIQVYVARDAIGEEPYADFKKSDIGDIYGI---- 153

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG+I + A+++ +LS + ++ LP          +R++ R++DL  +   +
Sbjct: 154 --KGWAFRTKTGEISIHAEEMTLLSKSLQI-LPEKFHGLTDTDMRYRQRYVDLVMNKDSR 210

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           +  VKR+ ++  +R  +   +F+E  TPIL +++   A         +      L  + +
Sbjct: 211 DVFVKRSLMMKEIRNFLAERDFMEVETPILVSNAGGAAARPFETHYNSLNEDVKLRISLE 270

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R ++I   FR+E   +   P EF  +++  ++ + + ++   E + R 
Sbjct: 271 LYLKRLIVGGFERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMELTETMFRR 329

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           + E+      +S              Y   + DL  P     +T+         F  I  
Sbjct: 330 LAEKVVGSTKIS--------------YNGIEIDLGKPFERMTMTDAVKKFAGVDFDTIAD 375

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
                 +               D +N +    
Sbjct: 376 DEAAKAIAREKGVEFEDRHKKGDILNLFFEEF 407



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 30/160 (18%)

Query: 417 RNHIAQELGII-----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           R+     L +        N  +  +I D P               +P T  +        
Sbjct: 393 RHKKGDILNLFFEEFCEENLIQPTFITDHP------------IEISPLTKKKP------- 433

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYR 527
            D   +   +++L  N +E+ +     +      + F+    +    ++           
Sbjct: 434 TDPTKV--ERFELFINTWEMCNAYSELNDPIDQRERFAAQDANAAAGDDEAEHTDEDFLN 491

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GGI  G+DR+ MLL  ++ +R+V LFP  ++
Sbjct: 492 ALEIGMPPTGGIGYGLDRLCMLLTDSQAIRDVLLFPTMKS 531


>gi|291618680|ref|YP_003521422.1| LysS [Pantoea ananatis LMG 20103]
 gi|291153710|gb|ADD78294.1| LysS [Pantoea ananatis LMG 20103]
 gi|327395060|dbj|BAK12482.1| lysyl-tRNA synthetase LysS [Pantoea ananatis AJ13355]
          Length = 506

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 77/357 (21%), Positives = 139/357 (38%), Gaps = 35/357 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y   S  +L   D+G  V ++G +   R  G   F+ ++D  G  Q+    D     I  
Sbjct: 53  YDEKSNEEL--EDLGIEVSVAGRMMTRRIMGKASFITLQDVGGRIQLYVARDDLAEGIYN 110

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++    +       TG++ +   ++ +L+ A   PLP        + 
Sbjct: 111 EQFKKWDL---GDILGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQE 164

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL   D        R++I+  +R  M+  +F+E  TP++        AR F+
Sbjct: 165 TRYRQRYLDLIANDESRNTFKIRSQIMAGIRQFMVGRDFMEVETPMMQVIPGGASARPFI 224

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  +++ M
Sbjct: 225 THHNALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGI-SPRHNPEFTMMELYM 282

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E++ R + ++                   +  YG  + D   P     
Sbjct: 283 AYADYKDLIELTESLFRTLAQDILGST--------------VVPYGEQEFDFGKPFEKLT 328

Query: 302 VTEHFVHS-------EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           + E            +   F K +++     +     K  G  R   +   E A + 
Sbjct: 329 MREAIKKYRPETDLADLDDFDKAVAIAQTIGIK--VEKSWGLGRVVTEIFEETAEAH 383



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/331 (14%), Positives = 95/331 (28%), Gaps = 26/331 (7%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+   D +     +++        G   +  F+       I  Y    P+L    ++   
Sbjct: 197 FMVGRDFMEVETPMMQ-----VIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVVGG 251

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +          ++ +S     E   +       +      + E         +      
Sbjct: 252 FDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGSTVV 311

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                      P  K       +  R   D+ D D       D     +     +   + 
Sbjct: 312 PYGEQEFDFGKPFEKLTMREAIKKYRPETDLADLDDF-----DKAVAIAQTIGIKVEKSW 366

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            LG +    FE               E  +         P       + ND       ++
Sbjct: 367 GLGRVVTEIFE------------ETAEAHLIQPTFITEYPAEVSPLARRNDENPEITDRF 414

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGG 538
           +    G EI +G    + ++   + F     +K+  ++           A + G+PP  G
Sbjct: 415 EFFIGGREIGNGFSELNDAQDQAERFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAG 474

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           +  GIDR+VML   +  +R+V LFP  +   
Sbjct: 475 LGIGIDRMVMLFTNSHTIRDVILFPALRPGS 505


>gi|170064641|ref|XP_001867610.1| lysyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167881959|gb|EDS45342.1| lysyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 585

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 91/556 (16%), Positives = 181/556 (32%), Gaps = 111/556 (19%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  + ++G +H +R  G  +IF D+R      QV+AN  +  +E   +   +      G 
Sbjct: 112 GESLSVAGRIHAIRESGGKLIFYDLRGEGVKLQVMAN--AKLYESEATFGEDTARLRRGD 169

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-R 135
           ++             G++ +  +K+++LS      LP        +  RF+ R+LDL   
Sbjct: 170 IVGIVG--YPGKTKKGELSVIPKKLKLLSPCL-HMLPHLHYGLKDKETRFRQRYLDLILN 226

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R +II+ +R  +    F+E  TP++   +        +    +      L 
Sbjct: 227 NHVRDIFYVRAKIISYVRQFLDGMGFLEVETPMMNMIAGGATAKPFITHHNDLNMNLFLR 286

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y ++L   G DR ++I   FR+E       P EF   +  M++ + +D++   E 
Sbjct: 287 IAPELYLKMLTVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYNDLIEMTEK 345

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++ G+ +                Y       G D  +                     F 
Sbjct: 346 MVSGMVKSIHG-----------SYKIKYHPEGPDGKEFEVDFT-------------PPFK 381

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPV 375
           ++  ++   E+  +            D++N                              
Sbjct: 382 RVSMISTLEEILKVKFPAA-------DKLN--------------------------TPEA 408

Query: 376 AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435
            K L+ + T+                    P                    +  NC    
Sbjct: 409 NKFLSDLCTKHAVE-------------CPAPRTTARLLDKLVGEF------LEENCINPT 449

Query: 436 WIMDF-----PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
           +I D      P  +++     +      F M +    +    +  +++  +++       
Sbjct: 450 FICDHPQIMSPLAKYHRNATGLTERFELFVMKKEVCNAYTELNDPAVQRERFE------- 502

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
                          Q  ++     +  +        A + G+PP GG   GIDR+ M L
Sbjct: 503 ---------------QQAADKAAGDDEAQLVDENFCTALEYGLPPTGGWGMGIDRLTMFL 547

Query: 551 LGAKNVREVSLFPMSQ 566
               N++EV LFP  +
Sbjct: 548 TDNNNIKEVLLFPAMK 563


>gi|291460290|ref|ZP_06599680.1| lysine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291417045|gb|EFE90764.1| lysine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 656

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 64/299 (21%), Positives = 128/299 (42%), Gaps = 19/299 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   FL ++D  G  QV    DS   +  +  +   +  + G+ 
Sbjct: 63  GKTVSVAGRILSKRVMGKASFLHLQDREGKIQVYVTRDSLGEDRYRGFKKLDIGDLIGV- 121

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                E        G+I + A+K+ +LS +   PLP          +R++ R++DL  + 
Sbjct: 122 -----EGFAFTTKMGEISIHAEKLTLLSKSL-YPLPEKFHGLQDTDVRYRQRYVDLIMNE 175

Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                 VKR+RII+ +R  +   +FIE  TP+L  ++   A                L  
Sbjct: 176 DSRAVFVKRSRIIHEIRSFLADRDFIEVETPMLVDNAGGAAARPFETHYNALDEDVKLRI 235

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + + Y + L+  G +R F+I   FR+E   +   P EF  +++  ++ + + ++   E++
Sbjct: 236 SLELYLKRLIIGGLERVFEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMMELTESL 294

Query: 257 LRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKPDLRNPIIMHNVTEH 305
            R + E+    + +S           F R+   +A++   G D  +++  +    + + 
Sbjct: 295 FRHIAEKVCGTSLISYQGTEIDLGKPFQRLTMTEAVKEATGIDFDEIKELVEARRLAKE 353



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 49/130 (37%), Gaps = 13/130 (10%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES----LKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           F+E   EEK I      F M      S     K  D   +   +++L   G E+ +    
Sbjct: 371 FFEEFCEEKLIQPT---FIMDHPVEISPLTKRKPEDPSKV--ERFELYIYGREMCNAYSE 425

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
            +      + F          +            A + GMPP GGI  GIDR+VML    
Sbjct: 426 LNDPIDQRERFLAQDALAAAGDEEANHTDEDFLHAMEIGMPPTGGIGYGIDRLVMLFTDT 485

Query: 554 KNVREVSLFP 563
             +R+V LFP
Sbjct: 486 PAIRDVLLFP 495


>gi|259505915|ref|ZP_05748817.1| lysine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|259166495|gb|EEW51049.1| lysine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 509

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 103/584 (17%), Positives = 187/584 (32%), Gaps = 136/584 (23%)

Query: 5   RTHSCGDLGVSDV------------------GSFVRLSGWVHRVRPHGGIIFLDIRDHYG 46
           RT S  DL    V                     V ++G V  +R  G + F  I++  G
Sbjct: 29  RTISITDLREKYVVGEGDAEGVTYLAAGDETDDTVAIAGRVMFIRNTGKLCFAVIQEGNG 88

Query: 47  ITQVVANPDSACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILS 105
            T        +   + +   + W   +D G ++S     I +    G++ + A    + S
Sbjct: 89  TT---VQAMLSLAAVGEEALAGWKADVDLGDIVSVRGRVIASK--RGELSVMADSWHMAS 143

Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIEC 164
            +       F   +  E  R ++R+ DL      + N + R +++ ++R  +  E+F+E 
Sbjct: 144 KSLRPLPVAFA--DMSEDTRVRHRYTDLIMREQARTNALTRIKVMRALRKYLEGEDFLEV 201

Query: 165 STPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TP+L        AR F+  S       Y L  AP+ + +  +  G +R F++   FR+E
Sbjct: 202 ETPMLQTLHGGAAARPFVTHSNAFDLDLY-LRIAPELFLKRCVVGGMERVFEVNRNFRNE 260

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
              S   P EF  L+   ++   +     ++ +++ V +E                    
Sbjct: 261 GADSTHSP-EFSMLETYQAWGTYETGARLIQGLVQFVAQEVFGTT--------------- 304

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
                        + + + T + +  E++      S+N                R F  +
Sbjct: 305 ------------EVTLADGTTYDLGGEWKTIEMYPSLNE------------ALQRKFPGQ 340

Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403
                 S                             ++     I   + +          
Sbjct: 341 PEVTVES-----------------------------SVEELREIAAVIGLAV-------- 363

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463
             P K           I  EL +     +   ++ DFP               +P T   
Sbjct: 364 --PEKGGWGHGKLVEEI-WEL-LCEDQLYGPIFVKDFP------------VETSPLTRQH 407

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF- 522
                            ++DL   GFE+A+G        +  + F +        ++   
Sbjct: 408 RD---------KPGVTEKWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAM 458

Query: 523 ---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                   A + GMPP  G   GIDR++M L G   +RE  LFP
Sbjct: 459 VLDEDFLAAMEQGMPPTAGCGMGIDRLLMALTGLG-IRETVLFP 501


>gi|254168902|ref|ZP_04875742.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622166|gb|EDY34741.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 428

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 93/363 (25%), Positives = 151/363 (41%), Gaps = 21/363 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+  +      G  V++ GW+H +R  G I F+ +RD YG  Q+         E  K 
Sbjct: 3   RTHTTKE-AAQLDGEEVKVCGWIHDIRVLGKIAFIILRDRYGFAQLTLIRSIVGKEKFKE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPES 123
               +       V+    +           E+  ++IE+L+ AE      V  +      
Sbjct: 62  ----YTKLTRESVICARGKVQKTKQAKLGFEILPEEIEVLNRAESPLPLGVADKVSADLE 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R + RFLDLR+  +      R+ I+  +R  ++ +NF+E  TP + A++ EG  +    
Sbjct: 118 TRIENRFLDLRKREVLAVFEIRSTILQGIREYLLNQNFVEVHTPKIVATATEGGTELFPV 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++  L Q+PQ YKQ+LMA+G DR  ++AP FR E+  + R   EF  +D+EMSF
Sbjct: 178 KYFEKDAY--LNQSPQLYKQVLMAAGLDRVLEVAPAFRAEEHNTTRHLNEFISIDIEMSF 235

Query: 244 VEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYGTDKP 291
            ++ D ++ +E  +    ++              N    S  F RI YDDA+        
Sbjct: 236 ADEADAMHMLEGSIVNAIKKLKEERKEEMEILGINWEVPSLPFKRITYDDALEIVRKKGI 295

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           D+             + SE + F  I    P           G  + AF     E   + 
Sbjct: 296 DMEWGEEFSTEALKALGSELQEFYFITRW-PMEIKPFYVLPDGKYSHAFDLMYGEREITS 354

Query: 352 GQP 354
           G  
Sbjct: 355 GAQ 357



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 27/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I  +P                PF +   G             +  +DL+    EI 
Sbjct: 317 EFYFITRWPM------------EIKPFYVLPDGKY-----------SHAFDLMYGEREIT 353

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  RNH+ E +++   + G++       F    RAF+ GMPPH G   G++R+VM++ G
Sbjct: 354 SGAQRNHVYESLIEVMRSKGLNP----ENFEYYLRAFRYGMPPHAGWGLGLERLVMIITG 409

Query: 553 AKNVREVSLFPMSQNF 568
            KN+RE  +FP  +  
Sbjct: 410 VKNIRECVIFPRDRTR 425


>gi|325288418|ref|YP_004264599.1| Lysyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324963819|gb|ADY54598.1| Lysyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 491

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 70/350 (20%), Positives = 139/350 (39%), Gaps = 26/350 (7%)

Query: 3   RY-RTHSCGDL---GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           RY RTH   ++           V ++G +   R  G   F  I+D  G  Q+ +  D+  
Sbjct: 33  RYERTHISEEIINGFDQLEEKEVSVAGRIMSKRDMGKTCFAHIQDIGGRIQIYSRVDAFG 92

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E  ++ +S  +  I G+      + I      G+I + A++  ILS +    LP     
Sbjct: 93  EEKFETFKSLDIGDIIGV------KGIVFRTKKGEISIRAEEYRILSKSLR-NLPEKFHG 145

Query: 119 EYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
                 R++ R+LDL  ++ + +  + R++II +MR  +  + F+E  TP L T      
Sbjct: 146 LTNVETRYRQRYLDLIMNSDVKQTFIVRSQIIRAMREYLEDKGFLEVETPTLMTIPGGAT 205

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y +  A +   + L+  GF++ ++I   FR+E       P EF  
Sbjct: 206 ARPFITHHNALDMQLY-MRIALELPLKRLIVGGFEKVYEIGRIFRNEGISVKHNP-EFTM 263

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +++  ++ + +DI+N  E+++  +  +  N   +S     I +    +R           
Sbjct: 264 MELYQAYADYEDIMNLTEDMIIYITRKVHNTLELSYQGETINFAKPWKR----------- 312

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           + M ++ + +   +F             +   +            +   E
Sbjct: 313 VKMLDLIKEYTGIDFEEIQTDEEARAVADSRGLIIGKDETKGKIINAFFE 362



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 4/96 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVM----LQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             +++L   G E A+     +          +         E          ++ + G+P
Sbjct: 396 TDRFELFIYGRETANAFSELNDPIDQRGRFEKQMVEREKGDEEAHMLDEDFLQSLEYGLP 455

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           P GG+  GIDR+VMLL  + ++R+V LFP  +   +
Sbjct: 456 PTGGLGIGIDRLVMLLTDSASIRDVILFPTMKPREE 491


>gi|195551041|ref|XP_002076152.1| GD12030 [Drosophila simulans]
 gi|194201801|gb|EDX15377.1| GD12030 [Drosophila simulans]
          Length = 299

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 75/302 (24%), Positives = 125/302 (41%), Gaps = 18/302 (5%)

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           ++E    S+               V A  A   G  R   + + +  +         +F 
Sbjct: 1   MSEIIEKSDEFKEKYDDLGANAIVVRASEAFWNGAARKHYESLGKEFK-------GTLFV 53

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN--- 418
           R            + K L       +  + D+++ D  F   G  ++  +     R    
Sbjct: 54  RKFGPTK-DVQEKLGKLLGEDVATEVADKFDLEENDLLFLGIGSKVETRALLGRIRLDYQ 112

Query: 419 -HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES---LKGNDL 474
             + +       N F F W++DFP +E N E  +++  H+PFT+P             +L
Sbjct: 113 DFLVENAKTKKPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDLENFATSCENL 172

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            SI++  YDLV NG E+  G IR H  ++       +        +    L  A + G P
Sbjct: 173 ESIRSQAYDLVLNGQEVGGGSIRIHDRDMQHFILEQILKIPH---DHLSHLLSALESGCP 229

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           PHGGIA G+DR++ +L  A+++R+V  FP S N  D L  +P  +S E++R   L +VE 
Sbjct: 230 PHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAPVLISDEEMRLYHLSVVEE 289

Query: 595 PK 596
            +
Sbjct: 290 EE 291


>gi|297588654|ref|ZP_06947297.1| lysine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297574027|gb|EFH92748.1| lysine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 636

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 67/286 (23%), Positives = 132/286 (46%), Gaps = 20/286 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+++G +   R HG + F+D++D  G  Q+    +    E    V++  +  I G+ 
Sbjct: 49  GKEVKIAGRIMSKRGHGKVNFMDLQDSVGRIQLFNKVNELGEENYAKVKNMDIGDIVGV- 107

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                E       +G++ +  + + +LS + ++ LP          +R++ R++DL  + 
Sbjct: 108 -----EGTIFKTHSGEVSIRTKSVVLLSKSLQI-LPEKWHGLKDPDLRYRQRYVDLIMNP 161

Query: 138 LHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
             K+  VKR+RII+++R  +    F+E  TPIL T +    AR F+          Y L 
Sbjct: 162 EIKDTFVKRSRIISAIREFLDTRGFLEVDTPILNTIAGGANARPFITHHNTLDIDMY-LR 220

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + Y + L+  GFD+ +++   FR+E       P E+  +++  ++ + +D+++  E 
Sbjct: 221 IANELYLKRLIVGGFDKVYEMGRMFRNEGMDHTHNP-EYTAIELYQAYADYNDMMDITEQ 279

Query: 256 VLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRYGTDKPD 292
           ++  V E+ +              +  + RI   DAI+ Y     D
Sbjct: 280 LVAFVCEKVNGSMKAQFGETEIDFTPPWKRITMVDAIKEYADINFD 325



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 53/128 (41%), Gaps = 5/128 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   EEK I          +    + +  D       +++      EIA+     +   
Sbjct: 358 FEHFCEEKLIQPTFVLGHPVEVSPLAKRNPDDER-YTHRFEAFVCTKEIANAFSELNNPI 416

Query: 503 VMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F     ++E  ++           A + G+PP GG+  G+DR++M+L   +++R+
Sbjct: 417 DQKERFLKQVEARENGDDEAQMMDYDFLNALEVGLPPTGGLGIGVDRLIMMLTNNESIRD 476

Query: 559 VSLFPMSQ 566
           + LFP  +
Sbjct: 477 IMLFPTMK 484


>gi|308171972|ref|YP_003918677.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307604836|emb|CBI41207.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328551783|gb|AEB22275.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328910043|gb|AEB61639.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 499

 Score =  214 bits (546), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 62/303 (20%), Positives = 123/303 (40%), Gaps = 18/303 (5%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F  ++D  G  Q+    DS   E  +  +S  +    G V+ 
Sbjct: 64  EVTIAGRMMTKRGKGKAGFAHLQDLEGQIQIYVRKDSVGEEQYEIFKSSDL----GDVIG 119

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
            + +    N+  G++ + A   E+L+ A   PLP           R++ R+LDL  +   
Sbjct: 120 ITGKVFKTNV--GELSVKATSFELLTKALR-PLPDKYHGLKDVEQRYRQRYLDLIVNPDS 176

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
           K   + R++II +MR  +    ++E  TP + +      AR F+          Y +  A
Sbjct: 177 KQTFITRSKIIQAMRRYLDDHGYLEVETPTMHSIPGGASARPFITHHNALDMPLY-MRIA 235

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++  EN++
Sbjct: 236 IELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDIMSLTENLV 294

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP-------DLRNPIIMHNVTEHFVHSE 310
             + +E     T+     +I      +R             D  N + +     H     
Sbjct: 295 AHIAQEVLGSTTIQYGEEQIDLKPEWKRLHMVDAVKEATGVDFWNEMTVEEARSHAKEHG 354

Query: 311 FRV 313
             +
Sbjct: 355 IEI 357



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 75/205 (36%), Gaps = 11/205 (5%)

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
             +G           +       +   D+     G          +AR+H A+E GI   
Sbjct: 300 EVLGSTTIQYGEEQIDLKPEWKRLHMVDAVKEATGVDFWNEMTVEEARSH-AKEHGIEIT 358

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCN 487
           N      I++  F+E   EE  I      F       +  L   +    +   +++L   
Sbjct: 359 NSMTVGHIIN-EFFEQKIEETLIQPT---FIYGHPVEISPLAKKNPEDPRFTDRFELFIV 414

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGI 543
           G E A+     +      + F      +E   +           A + GMPP GG+  GI
Sbjct: 415 GREHANAFTELNDPIDQRERFEAQLKEREEGNDEAHMMDEDFVEALEYGMPPTGGLGIGI 474

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNF 568
           DR+VMLL  A ++R+V LFP  ++ 
Sbjct: 475 DRLVMLLTNAPSIRDVLLFPQMRHR 499


>gi|223044407|ref|ZP_03614440.1| lysyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|314932739|ref|ZP_07840109.1| lysine--tRNA ligase [Staphylococcus caprae C87]
 gi|222442196|gb|EEE48308.1| lysyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|313654569|gb|EFS18321.1| lysine--tRNA ligase [Staphylococcus caprae C87]
          Length = 495

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 143/373 (38%), Gaps = 26/373 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   +  S V ++G +   R  G   F  I+D  G  Q+    D    E     +   +
Sbjct: 51  ELHEKEDESHVAIAGRLMTKRGKGKAGFAHIQDLEGQIQIYVRKDQVGEEQFDIWKIADL 110

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             I G+      E +     TG+I + A+   +LS +   PLP           R++ R+
Sbjct: 111 GDIVGI------EGVMFKTNTGEISVKAKSFTLLSKSLR-PLPDKFHGLQDIEQRYRQRY 163

Query: 131 LDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDL  +    +  + R++II  MR  +  + F+E  TP++   +   A    V       
Sbjct: 164 LDLITNEDSTRTFINRSKIIQEMRNYLNKQGFLEVETPMMHQIAGGAAARPFVTHHNALD 223

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI
Sbjct: 224 ATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYHDI 282

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++  E+++R + +E                  A   Y  ++ DL +     ++ +    +
Sbjct: 283 MDLTESMVRHIAQEVFG--------------SAKVSYNDEEIDLESSWRRLHIVDAVKEA 328

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
               F  + +      +          N  +   +NE+   + +  L    +     G+ 
Sbjct: 329 TGVNFYDVKTDEEAVSLAKEHGIEITENMKYGHILNEFFEQKVEETLIQPTFIY---GHP 385

Query: 370 AGMGPVAKHLNIV 382
             + P+AK     
Sbjct: 386 IEISPLAKKNPED 398



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F       +  L   +    +   +++L   G E A+     +
Sbjct: 366 FFEQKVEETLIQPT---FIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELN 422

Query: 500 MSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F    + KE               A + GMPP GG+  GIDR+VMLL  + +
Sbjct: 423 DPIDQRERFEAQLVEKEQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPS 482

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  + 
Sbjct: 483 IRDVLLFPYMRQ 494


>gi|15803426|ref|NP_289459.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15833016|ref|NP_311789.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168747633|ref|ZP_02772655.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4113]
 gi|168753827|ref|ZP_02778834.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4401]
 gi|168760017|ref|ZP_02785024.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4501]
 gi|168766882|ref|ZP_02791889.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4486]
 gi|168775766|ref|ZP_02800773.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4196]
 gi|168778902|ref|ZP_02803909.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4076]
 gi|168785735|ref|ZP_02810742.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC869]
 gi|168800022|ref|ZP_02825029.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC508]
 gi|195936507|ref|ZP_03081889.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208809534|ref|ZP_03251871.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4206]
 gi|208814126|ref|ZP_03255455.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4045]
 gi|208818755|ref|ZP_03259075.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4042]
 gi|209398148|ref|YP_002272364.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4115]
 gi|217327355|ref|ZP_03443438.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. TW14588]
 gi|254794841|ref|YP_003079678.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261226203|ref|ZP_05940484.1| lysine tRNA synthetase, constitutive [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261256542|ref|ZP_05949075.1| lysine tRNA synthetase, constitutive [Escherichia coli O157:H7 str.
           FRIK966]
 gi|39932437|sp|Q8XD57|SYK1_ECO57 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|12517416|gb|AAG58018.1|AE005519_4 lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation
           in primer RNA [Escherichia coli O157:H7 str. EDL933]
 gi|13363234|dbj|BAB37185.1| lysine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187768800|gb|EDU32644.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4196]
 gi|188017948|gb|EDU56070.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4113]
 gi|189003227|gb|EDU72213.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4076]
 gi|189358608|gb|EDU77027.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4401]
 gi|189363788|gb|EDU82207.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4486]
 gi|189369387|gb|EDU87803.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4501]
 gi|189373868|gb|EDU92284.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC869]
 gi|189377631|gb|EDU96047.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC508]
 gi|208729335|gb|EDZ78936.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4206]
 gi|208735403|gb|EDZ84090.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4045]
 gi|208738878|gb|EDZ86560.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4042]
 gi|209159548|gb|ACI36981.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4115]
 gi|209760608|gb|ACI78616.1| lysine tRNA synthetase [Escherichia coli]
 gi|209760610|gb|ACI78617.1| lysine tRNA synthetase [Escherichia coli]
 gi|209760612|gb|ACI78618.1| lysine tRNA synthetase [Escherichia coli]
 gi|209760616|gb|ACI78620.1| lysine tRNA synthetase [Escherichia coli]
 gi|217319722|gb|EEC28147.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. TW14588]
 gi|254594241|gb|ACT73602.1| lysine tRNA synthetase, constitutive [Escherichia coli O157:H7 str.
           TW14359]
 gi|320189233|gb|EFW63892.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320640533|gb|EFX10072.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320645780|gb|EFX14765.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320651080|gb|EFX19520.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320667171|gb|EFX34134.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|326339027|gb|EGD62842.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326343091|gb|EGD66859.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 505

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 138/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIVESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 70/202 (34%), Gaps = 21/202 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +    P  K       +  R   DM D D+      D  K    +       +  LG I 
Sbjct: 318 LDFGKPFEKLTMREAIKKYRPETDMADLDNF-----DSAKAIVESIGIHVEKSWGLGRIV 372

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE               E  +         P       + ND+      +++    G
Sbjct: 373 TEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 420

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  GID
Sbjct: 421 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VML   +  +R+V LFP  +
Sbjct: 481 RMVMLFTNSHTIRDVILFPAMR 502


>gi|52548877|gb|AAU82726.1| aspartyl-tRNA synthetase [uncultured archaeon GZfos19C7]
          Length = 441

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 80/321 (24%), Positives = 147/321 (45%), Gaps = 17/321 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M ++      ++   + G  V ++GWVH  R  GG+ FL +RD  G  QV  +      E
Sbjct: 3   MLKWNRKYATEISSDNDGETVCIAGWVHEKRDLGGVFFLIVRDFSGFAQVTLHKHKGGVE 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + + +         V++   +  + +      E+   ++E+LS A  +      E+  
Sbjct: 63  --QELFARVKKVPRESVVAIEGKVKSESKAPNGYEIIPDQMEVLSEASLVLPLDTTEKVG 120

Query: 121 PE-SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            E   R   RF+DLR +   +  + R+R++ ++R  +    FIE +TP + +++ EG   
Sbjct: 121 AELDTRLDARFMDLRIERTKQIFIIRSRVLKAIREFLDERGFIEINTPKIVSAATEGGTA 180

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S   + +F  L Q+PQ YKQ+LMASGFDR ++IAP FR E+  + +   E   +D+
Sbjct: 181 LFPISYFEREAF--LNQSPQLYKQMLMASGFDRVYEIAPIFRAEEHDTTKHLNEATSMDI 238

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNG------------NTVSNNFLRICYDDAIRRYG 287
           E++FV   +++  +E ++  V+ +  +                   F RI Y++AI    
Sbjct: 239 EVAFVSDKEVMKILEELIAFVYSKVVDYSGLAKLNLQLPLEVPKTPFRRITYEEAIEALS 298

Query: 288 TDKPDLRNPIIMHNVTEHFVH 308
               ++     +    EH + 
Sbjct: 299 KAGEEIEWGEDLGTSAEHTLG 319



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 27/176 (15%)

Query: 401 FIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEEKKIDFA 455
               + ++  S A +      ++LG    +       E  +I D+P             A
Sbjct: 288 ITYEEAIEALSKAGE-EIEWGEDLGTSAEHTLGAMIGELYFITDWP------------CA 334

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
             PF       E+   +         +DL+    E+ASG  R H  E++ +   + G+S 
Sbjct: 335 IKPFYAQPADAEAKSKD-----TCNAFDLMHPRVELASGSQRVHSYELLKRNIESKGLSA 389

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
               + F      F+ GMPPH G   GIDR++M +L  +N+REV LFP  +     
Sbjct: 390 ----DSFEFYLDTFRFGMPPHAGWGLGIDRLLMSMLEIENIREVVLFPRDRRRLAP 441


>gi|283788452|ref|YP_003368317.1| lysyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282951906|emb|CBG91624.1| lysyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 505

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 136/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHADFDGKENEELEALNVEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     I      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGIYNEQFKKWDL---GDILGAKGKLF--KTKTGELSVHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N    R++I+  +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKIRSQILAGIRQFMVGRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V               YG +  D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTTQVP--------------YGDEVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMAELDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 70/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM + D+      D  K  + +   +   +  LG I    FE
Sbjct: 323 PFEKLTMREAIKKYRPETDMAELDNF-----DSAKAIAESIGIKVEKSWGLGRIVTEIFE 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F +   +K   ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFQDQVDAKAAGDDEAMFFDEDYVTALEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|160939908|ref|ZP_02087255.1| hypothetical protein CLOBOL_04799 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437342|gb|EDP15107.1| hypothetical protein CLOBOL_04799 [Clostridium bolteae ATCC
           BAA-613]
          Length = 654

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 72/340 (21%), Positives = 140/340 (41%), Gaps = 33/340 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G    ++G +   R  G   F +++D  G  QV    DS   E  K  +   +  I G+ 
Sbjct: 59  GKEAAIAGRMMFKRVMGKASFCNVQDLKGSIQVYVARDSVGEESYKDFKKMDIGDIVGV- 117

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
                +       TG+I + A ++ +LS + +  LP          +R++ R++DL  + 
Sbjct: 118 -----KGTAFTTKTGEISIHATEVTLLSKSLQ-VLPEKFHGLTDTDMRYRQRYVDLIMNA 171

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +    +KR+RI+ ++R  +  E F+E  TP+L +++   A                L  
Sbjct: 172 EVKDTFIKRSRILAAIRKYLGGEGFMEVETPMLVSNAGGAAARPFETHFNALDEDLKLRI 231

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + +++  E +
Sbjct: 232 SLELYLKRLIVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMMDLTEKL 290

Query: 257 LRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
            R V +E     T++           F RI   DA+++Y     D      +H + E   
Sbjct: 291 YRFVAQEVLGTTTITYKGVEMDLGKPFARITMVDAVKKYAGVDFD-----QIHTLEE--- 342

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
                  ++ ++   G E      KG   N  F +   E 
Sbjct: 343 -------ARAVAKEKGVEFEGRHKKGDILNLFFEEFAEEH 375



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 58/160 (36%), Gaps = 30/160 (18%)

Query: 417 RNHIAQELGII-----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           R+     L +        +  +  +++D P               +P T  + G      
Sbjct: 357 RHKKGDILNLFFEEFAEEHLVQPTFVLDHP------------VEISPLTKKKPGNPDY-- 402

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYR 527
                    +++   NG+E+A+     +      + F          +            
Sbjct: 403 -------VERFEFFMNGWEMANAYSEINDPIDQRERFRAQEELLAQGDEEANHTDEDFLN 455

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++
Sbjct: 456 ALEVGMPPTGGIGFGIDRMVMLLTDSPAIRDVLLFPTMKS 495


>gi|317049376|ref|YP_004117024.1| lysyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316950993|gb|ADU70468.1| lysyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 505

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 77/357 (21%), Positives = 139/357 (38%), Gaps = 35/357 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y   S  +L   D+G  V ++G +   R  G   F+ ++D  G  Q+    D     +  
Sbjct: 53  YDEKSNEEL--EDLGIEVSVAGRMMTRRIMGKASFITLQDVGGRIQLYVARDDLAEGVYN 110

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++    +       TG++ +   ++ +L+ A   PLP        + 
Sbjct: 111 EQFKKWDL---GDILGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQE 164

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL   D        R++I+  +R  M+  +F+E  TP++        AR F+
Sbjct: 165 TRYRQRYLDLIANDESRHTFQVRSKIMAGIRQFMVGRDFMEVETPMMQVIPGGASARPFI 224

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  +++ M
Sbjct: 225 THHNALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGI-SPRHNPEFTMMELYM 282

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E++ R + ++      V               YG +  D   P     
Sbjct: 283 AYADYKDLIELTESLFRTLAQDVLGTTEVP--------------YGDNTFDFGKPFEKLT 328

Query: 302 VTEHFVHS-------EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           + E            +   F K +++     +     K  G  R   +   E A + 
Sbjct: 329 MREAIKKYRPETDLADLDDFDKAVAIANALHIK--VEKSWGLGRVVTEIFEETAEAH 383



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 68/202 (33%), Gaps = 21/202 (10%)

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
                   P  K       +  R   D+ D D       D  K  + A      + +  G
Sbjct: 315 DNTFDFGKPFEKLTMREAIKKYRPETDLADLD-------DFDKAVAIANALHIKVEKSWG 367

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           +          + +   +E   E   +         P       + ND       +++  
Sbjct: 368 LGRV-------VTE--IFEETAEA-HLIQPTFITEYPAEVSPLARRNDENPEITDRFEFF 417

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAA 541
             G EI +G    + +E   + F     +K+  ++           A + G+PP  G+  
Sbjct: 418 IGGREIGNGFSELNDAEDQAERFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGI 477

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           GIDR+VML   +  +R+V LFP
Sbjct: 478 GIDRMVMLFTNSHTIRDVILFP 499


>gi|237786207|ref|YP_002906912.1| lysyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237759119|gb|ACR18369.1| lysyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 536

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 103/555 (18%), Positives = 188/555 (33%), Gaps = 107/555 (19%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID- 74
           +  + V ++G V  +R  G + F  +++  G          +  E+ +     W   +D 
Sbjct: 76  ETDTEVAVAGRVIFMRNTGKLCFATLQEGDGTQ---LQAMLSLAEVGEDALKRWKSDVDM 132

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G  +S     +++    G++ + A    + S A       F   +  E  R +YR+ DL 
Sbjct: 133 GDFVSIRGRVVSSR--RGELSVFASTWTLASKALRPLPVSFA--DMNEDTRIRYRYTDLI 188

Query: 135 -RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            RD   + ++ R  ++ ++R  +    F+E  TP+L        AR F+  S       Y
Sbjct: 189 MRDDARRMMITRVTVVRAVREYLQGLGFLEVETPMLQTLHGGAAARPFVTHSNALDMDLY 248

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y +  +  G ++ F++   FR+E   S   P EF  L+   ++   DD   +
Sbjct: 249 -LRIAPELYLKRCVVGGIEKVFEVNRNFRNEGIDSSHSP-EFAMLETYQAYATYDDNAAS 306

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            + +++       N     N       D  +             + + + + +    E+ 
Sbjct: 307 TQGLIQHCARAV-NKLVHDNWDPEQDPDSLV-------------VTLADGSTYDFGGEWP 352

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
                 S+N                R F           GQP                  
Sbjct: 353 KLDMYDSLNE------------ALQRKF----------PGQPE----------------- 373

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
             V  H  +   +AI   + ++ G                       I +EL     +  
Sbjct: 374 --VTIHSTVDELKAIADTIGVEPGTGWGH------------GKFVEEIWEELCADQLDG- 418

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ +FP               +P T         + +        ++DL   GFE+A
Sbjct: 419 -PVFVRNFP------------VETSPLT---------RDHRSKPGVTEKWDLYVRGFELA 456

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G        +  Q F +        ++          +A + GMPP  G   GIDR++M
Sbjct: 457 TGYSELIDPVIQRQRFEDQARLAAGGDDEAMVLDEDFLQAMEQGMPPTAGTGMGIDRLLM 516

Query: 549 LLLGAKNVREVSLFP 563
            L G   +RE  LFP
Sbjct: 517 ALTGLG-IRETVLFP 530


>gi|308187993|ref|YP_003932124.1| lysyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308058503|gb|ADO10675.1| lysyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 506

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 73/347 (21%), Positives = 138/347 (39%), Gaps = 33/347 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L  
Sbjct: 61  LEALGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLFRTK--TGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 RRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N    R++I+  +R  M+  +F+E  TP++        AR F+          
Sbjct: 175 IANEESRNTFKIRSQIMAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS-- 309
             E++ R + ++                   +  YG  + D   P     + E       
Sbjct: 293 LTESLFRTLAQDVLGST--------------VVPYGEQEFDFGKPFEKLTMREAIKKYRP 338

Query: 310 -----EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
                +   F K +++     +     K  G  R   +   E A + 
Sbjct: 339 ETDLADLEDFDKAVAIAQSLHIK--VEKSWGLGRVVTEIFEETAEAH 383



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 66/196 (33%), Gaps = 14/196 (7%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
                    +R  +     ++      D  K  + A      + +  G+          +
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDLADLEDFDKAVAIAQSLHIKVEKSWGLGRV-------V 372

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
            +   +E   E   +         P       + ND       +++    G EI +G   
Sbjct: 373 TE--IFEETAEA-HLIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSE 429

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
            + +E   + F     +K+  ++           A + G+PP  G+  GIDR+VML   +
Sbjct: 430 LNDAEDQAERFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNS 489

Query: 554 KNVREVSLFPMSQNFC 569
             +R+V LFP  +   
Sbjct: 490 HTIRDVILFPALRPGS 505


>gi|332086814|gb|EGI91950.1| lysyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 505

 Score =  214 bits (545), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 142/364 (39%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPII---MHN-VTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     MH  + ++   ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMHEAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 21/202 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +    P  K       +  R   DM D D+      D  K  + +       +  LG I 
Sbjct: 318 LDFGKPFEKLTMHEAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIV 372

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE               E  +         P       + ND+      +++    G
Sbjct: 373 TEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGG 420

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  GID
Sbjct: 421 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VML   +  +R+V LFP  +
Sbjct: 481 RMVMLFTNSHTIRDVILFPAMR 502


>gi|303242487|ref|ZP_07328967.1| lysyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302589955|gb|EFL59723.1| lysyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 506

 Score =  214 bits (544), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 69/349 (19%), Positives = 132/349 (37%), Gaps = 23/349 (6%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           T    D   S  GS V ++G +   R  G   F D+RD     Q+    D    E+ +  
Sbjct: 56  TKYIVDNFESMEGSMVSIAGRLMSKRGMGKASFCDVRDRDSKIQIYIKVDEIGAEVYEDF 115

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           +   +    G ++    E        G+I L A  I +L+ + + PLP          +R
Sbjct: 116 KKFDI----GDIVGVKGEVF--RTHKGEISLKANNIILLAKSLQ-PLPEKWHGLTNVDLR 168

Query: 126 FKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP 183
           ++ R++DL  +   ++  + R+ II ++R  +    F+E  TP+L T      A+ F+  
Sbjct: 169 YRQRYVDLIVNPEVRDTFIVRSMIIKAIRKFLDERGFLEVDTPLLNTIPGGAAAKPFITH 228

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G +R +++   FR+E       P EF  +++  ++
Sbjct: 229 HNTLDIDMY-LRIAPELYLKRLIVGGLERVYEMGRMFRNEGMSVKHNP-EFTLMEVYEAY 286

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            +   +++  E ++  V +E      ++     I                 N + M    
Sbjct: 287 TDYKGMMDLSEQLISTVAKEVLGTTKINYQGQEIDLTPPW-----------NRMTMIEAV 335

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-NEWARSQ 351
           E +    F   +         +   +  +G        + M  E+A   
Sbjct: 336 EKYAGVNFNNITSDEEARNIAKEKKLHIEGNPTKGEVLNLMFEEFAEEH 384



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   EE  I          +    + +  D+ S    +++L     E+A+     +  
Sbjct: 376 MFEEFAEEHLIQPTFIMDYPVEVSPLTKRKPDMPSF-TERFELFITSREMANAYSELNDP 434

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F +    +E  +            A + GMPP GG+  GIDR++MLL  + ++R
Sbjct: 435 IDQKGRFLSQVEKREAGDEEANMMDEDFITALEYGMPPTGGLGIGIDRLIMLLTDSYSIR 494

Query: 558 EVSLFPMSQ 566
           ++ LFP  +
Sbjct: 495 DILLFPTMK 503


>gi|167768163|ref|ZP_02440216.1| hypothetical protein CLOSS21_02719 [Clostridium sp. SS2/1]
 gi|167709687|gb|EDS20266.1| hypothetical protein CLOSS21_02719 [Clostridium sp. SS2/1]
          Length = 646

 Score =  214 bits (544), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 131/350 (37%), Gaps = 26/350 (7%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   ++        G  V ++G +   R  G   F +++D  G  Q     D    E  
Sbjct: 38  THHSKEIKDNFEELEGKEVAVAGRLMFKRVMGKASFCNVQDLQGGIQAYVARDEIGVESY 97

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  +   +  I G+      +       TG+  + A+++ +LS + + PLP         
Sbjct: 98  QDFKKMDIGDIVGI------KGKVFATKTGEKSIHAEEVILLSKSLK-PLPEKFHGLTDT 150

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             R++ R++DL  +   K   +KR++II+ +R  +  + F+E  TP+L +++   +    
Sbjct: 151 DTRYRQRYVDLIMNEESKEVFIKRSKIISKIRSYLDGQGFMEVETPMLVSNAGGASARPF 210

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  + + Y + L+  G ++ ++I   FR+E   +   P EF  +++  
Sbjct: 211 ETHYNALSEDVKLRISLELYLKRLIVGGLEKVYEIGRVFRNEGVDTRHNP-EFTLMELYQ 269

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +   +++  EN+ R + EE   G  +      I              DL  P     
Sbjct: 270 AYTDYHGMMDLTENLYRYLAEEVCGGTKIQYKDFEI--------------DLGKPFERIT 315

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           + +         F +I ++                     D +N +    
Sbjct: 316 MVDAVKKYSGVDFKEIKTLEEARAAAEEHHVEYEERHKRGDILNLFFEEF 365



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 57/160 (35%), Gaps = 30/160 (18%)

Query: 417 RNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           R+     L +     +     +  ++MD P               +P T  +        
Sbjct: 351 RHKRGDILNLFFEEFVEDKLIQPTFVMDHP------------VEISPLTKRKPEDPDY-- 396

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYR 527
                    +++   NG+E+A+     +      + F          +            
Sbjct: 397 -------VERFEFFMNGWEMANAYSELNDPIDQRERFKAQEELLAQGDEEANTTDEDFLN 449

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++
Sbjct: 450 ALEIGMPPTGGIGFGIDRMVMLLTNSTAIRDVLLFPTMKS 489


>gi|194431772|ref|ZP_03064063.1| lysyl-tRNA synthetase LysS [Shigella dysenteriae 1012]
 gi|194420128|gb|EDX36206.1| lysyl-tRNA synthetase LysS [Shigella dysenteriae 1012]
 gi|320182208|gb|EFW57111.1| lysyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|332087728|gb|EGI92855.1| lysyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 505

 Score =  214 bits (544), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 141/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPII---MHN-VTEHFVHSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     MH  + ++   ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMHEAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 21/202 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +    P  K       +  R   DM D D+      D  K  + +       +  LG I 
Sbjct: 318 LDFGKPFEKLTMHEAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIV 372

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE               E  +         P       + ND+      +++    G
Sbjct: 373 TEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGG 420

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  GID
Sbjct: 421 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VML   +  +R+V LFP  +
Sbjct: 481 RMVMLFTNSHTIRDVILFPAMR 502


>gi|293390165|ref|ZP_06634499.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290950699|gb|EFE00818.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 502

 Score =  214 bits (544), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 21/297 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L    +   V ++G +   R  G   F+ I+D  G  Q+    D+    + K     W L
Sbjct: 57  LKEKHI--EVTVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGHWDL 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++            T ++ + A ++++L+ A   PLP        + +R++ R+L
Sbjct: 115 ---GDIVGIKGSLF--KTKTDELTVKATEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYL 168

Query: 132 DLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +    +  + R++++  +R   +++ F+E  TP+L        AR F+        
Sbjct: 169 DLISNEESRRTFIIRSKVVAGIREYFLSKGFMEVETPMLQVIPGGAAARPFVTHHNALDV 228

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+
Sbjct: 229 DMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDL 286

Query: 250 LNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           ++  E +LR +  +      V            F RI   +AI +YG++K  ++  +
Sbjct: 287 MDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHNAIIKYGSEKGIVKEDL 343



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 10/153 (6%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+ LGI     +    I++   +E   E   I      F M      S     ND     
Sbjct: 353 AERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQPT---FLMAHPAEISPLARRNDENPEV 408

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMP 534
             +++L   G EI +G    + +E     F     +KE  ++           A + G+P
Sbjct: 409 TDRFELFIGGREIGNGFSELNDAEDQNDRFDAQVAAKEAGDDEAMFKDEDFVIALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           P  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|304314436|ref|YP_003849583.1| aspartyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587895|gb|ADL58270.1| aspartyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 437

 Score =  214 bits (544), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 138/268 (51%), Gaps = 13/268 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH   D+     G  V + GWVH +R  GGIIF+ +RD  G+ Q+ A     +   F+ 
Sbjct: 8   RTHYSKDIKPEMDGEEVTVMGWVHEIRDLGGIIFVLLRDRDGLIQITAPSKKIEKDLFKS 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
            + ++ E V+   G V              G  E+    + +L+ +++  PL    + + 
Sbjct: 68  IRKLKKESVVAFGGRVQESDK-------APGGFEIIPSFLRVLNPSKQPLPLDPTEKVKA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RFLDLR+ ++      ++R+++S+R  +    F+E +TP L AS+ EG  + 
Sbjct: 121 EIDTRLDARFLDLRKPSVSAIFKIKSRMLHSVRVFLEENGFLEINTPKLVASATEGGTEL 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F  L Q+PQ YKQ++M++G DR ++IAP FR E+  + R   E   +D+E
Sbjct: 181 FPITYFEREAF--LGQSPQLYKQMMMSTGLDRVYEIAPIFRAEEHDTLRHLNEVISIDIE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN 268
            SFV+ +D++  +E ++  V E+ +   
Sbjct: 239 ASFVDHEDVMKILERLVVRVIEDVNEHC 266



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 12/120 (10%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
              A  PF +          ND    +++ +DL+    EI+SG +R H  +++++  S  
Sbjct: 330 WPTAIKPFYVMPDE------NDPE--RSYAFDLMYRDLEISSGAMRVHQHDLLVEKISRQ 381

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G++     + F     AF+ GMPPH G   G +R  M L G  N+RE  LFP  +     
Sbjct: 382 GLNP----DSFESYLAAFEYGMPPHAGWGLGAERFNMTLTGVNNIRETVLFPRDRRRLTP 437


>gi|311070729|ref|YP_003975652.1| lysyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310871246|gb|ADP34721.1| lysyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 499

 Score =  213 bits (543), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 60/303 (19%), Positives = 124/303 (40%), Gaps = 18/303 (5%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F  ++D  G  Q+    DS   E  +  ++  +    G ++ 
Sbjct: 64  EVTIAGRMMTKRGKGKAGFAHLQDLEGQIQIYVRKDSVGDEQYEIFKTSDL----GDLIG 119

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
            + +    N+  G++ + A   E+L+ A   PLP           R++ R+LDL  +   
Sbjct: 120 VTGKVFKTNV--GELSVKATSFELLTKALR-PLPDKYHGLKDVEQRYRQRYLDLIVNPDS 176

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
           KN    R++II +MR  +    ++E  TP + +      AR F+          Y +  A
Sbjct: 177 KNTFIARSKIIQAMRRYLDDHGYLEVETPTMHSIPGGASARPFITHHNALDMPLY-MRIA 235

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++  EN++
Sbjct: 236 IELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYQDIMSLTENLI 294

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP-------DLRNPIIMHNVTEHFVHSE 310
             + +E     T+     +I      +R             D  N + +    ++     
Sbjct: 295 AHIAQEVLGSTTIQYGEEQIDLKPEWKRLHMVDAVKEATGVDFWNEVTVEQARDYAKEHG 354

Query: 311 FRV 313
             +
Sbjct: 355 VEI 357



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 9/133 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F       +  L   +    +   +++L   G E A+     +
Sbjct: 370 FFEQKIEETLIQPT---FIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELN 426

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F      +E   +           A + GMPP GG+  GIDR+VMLL  A +
Sbjct: 427 DPIDQRERFEAQLKEREEGNDEAHMMDEDFVEALEYGMPPTGGLGIGIDRLVMLLTNAPS 486

Query: 556 VREVSLFPMSQNF 568
           +R+V LFP  +  
Sbjct: 487 IRDVLLFPQMRQR 499


>gi|212710039|ref|ZP_03318167.1| hypothetical protein PROVALCAL_01092 [Providencia alcalifaciens DSM
           30120]
 gi|212687246|gb|EEB46774.1| hypothetical protein PROVALCAL_01092 [Providencia alcalifaciens DSM
           30120]
          Length = 505

 Score =  213 bits (543), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 75/354 (21%), Positives = 138/354 (38%), Gaps = 35/354 (9%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            +  +L   D+   V ++G +   R  G   F  ++D  G  Q+  + D     I     
Sbjct: 55  KTAEEL--EDLNVEVTIAGRMMTRRIMGKASFATLQDVGGRIQIYVSRDDLPEGIYNEQF 112

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            +W L   G ++            TG++ +   ++ +L+ A   PLP        +  R+
Sbjct: 113 KKWDL---GDILGAKGRLF--KTKTGELTVHCHEVRLLTKALR-PLPDKFHGLSDQETRY 166

Query: 127 KYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+LDL   D      + R++I+  +R  M+   F+E  TP++        AR F+   
Sbjct: 167 RQRYLDLIANDESRNTFIIRSKILAEVRNFMVDHGFMEVETPMMQVIPGGASARPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ 
Sbjct: 227 NALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNPEFTMMELYMAYA 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +  D++   E++ R + ++                   + +YG  + D   P     + E
Sbjct: 285 DYRDLIVLTEDLFRILTQKVLGNT--------------VVKYGEQEFDFGKPFTKMTMKE 330

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351
                     + +  ++   +  AI         K  G  R  C+   E A S 
Sbjct: 331 AICKYRPE--TNVADLDDMDKAVAIAQSLGIKIEKSWGLGRIQCEIFEEVAESH 382



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 73/233 (31%), Gaps = 22/233 (9%)

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
              R       +  R   Q  L     +  E        P  K          R   ++ 
Sbjct: 284 ADYRDLIVLTEDLFRILTQKVLGNTVVKYGEQ-EFDFGKPFTKMTMKEAICKYRPETNVA 342

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
           D D       D     + +   +   +  LG I C  FE               E  +  
Sbjct: 343 DLDDM-----DKAVAIAQSLGIKIEKSWGLGRIQCEIFEEV------------AESHLIQ 385

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
                  P       + ND       +++    G EI +G    + +E   + F+     
Sbjct: 386 PTFITEYPAEVSPLARRNDENPFITDRFEFFIGGREIGNGFSELNDAEDQAERFAEQVRQ 445

Query: 515 KEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           K+  ++           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 446 KDEGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 498


>gi|261345592|ref|ZP_05973236.1| lysine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282566072|gb|EFB71607.1| lysine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 505

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 75/357 (21%), Positives = 141/357 (39%), Gaps = 35/357 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           +   +  +L   D+   V ++G +   R  G   F  ++D  G  Q+  + D     +  
Sbjct: 52  FDEKTAEEL--EDLNIDVTIAGRMMTRRIMGKASFATLQDVGGRIQIYVSRDDLPEGVYN 109

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++            TG++ +   ++ +L+ A   PLP        + 
Sbjct: 110 EQFKKWDL---GDILGAKGRLF--KTKTGELTVHCHEVRLLTKALR-PLPDKFHGLSDQE 163

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL   D      + R++I+  +R  M+++ F+E  TP++        AR F+
Sbjct: 164 TRYRQRYLDLIANDESRNTFIIRSKILAEVRNFMVSQGFMEVETPMMQVIPGGASARPFV 223

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M
Sbjct: 224 THHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNPEFTMMELYM 281

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E++ R + +E                   + +YG  + D   P     
Sbjct: 282 AYADYRDLIKLTEDLFRTLTQEVLGNT--------------VVKYGEQEFDFGKPFAKLT 327

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351
           + E          + +  ++   +  AI         K  G  R  C+   E A S 
Sbjct: 328 MKEAICKYRPE--TNVADLDDMDKAVAIAQSIGIKIEKSWGLGRIQCEIFEEVAESH 382



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/233 (19%), Positives = 75/233 (32%), Gaps = 22/233 (9%)

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
              R       +  R+  Q  L     +  E        P AK          R   ++ 
Sbjct: 284 ADYRDLIKLTEDLFRTLTQEVLGNTVVKYGEQ-EFDFGKPFAKLTMKEAICKYRPETNVA 342

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
           D D       D     + +   +   +  LG I C  FE               E  +  
Sbjct: 343 DLDDM-----DKAVAIAQSIGIKIEKSWGLGRIQCEIFEEV------------AESHLIQ 385

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
                  P       + ND       +++    G EI +G    + +E   + F+     
Sbjct: 386 PTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAERFAEQVRQ 445

Query: 515 KEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           K+  ++           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 446 KDEGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 498


>gi|11513774|pdb|1BBU|A Chain A, Lysyl-Trna Synthetase (Lyss) Complexed With Lysine
 gi|11513776|pdb|1BBW|A Chain A, Lysyl-Trna Synthetase (Lyss)
          Length = 504

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 138/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 41  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 100

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 101 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 154

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 155 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 214

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 215 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 272

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 273 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVT--------------YGDVTLD 318

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 319 FGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 378

Query: 348 ARSQ 351
           A + 
Sbjct: 379 AEAH 382



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 21/202 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +    P  K       +  R   DM D D+      D  K  + +       +  LG I 
Sbjct: 317 LDFGKPFEKLTMREAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIV 371

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE               E  +         P       + ND+      +++    G
Sbjct: 372 TEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 419

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  GID
Sbjct: 420 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 479

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VML   +  +R+V LFP  +
Sbjct: 480 RMVMLFTNSHTIRDVILFPAMR 501


>gi|15678254|ref|NP_275369.1| aspartyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3122882|sp|O26328|SYD_METTH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2621273|gb|AAB84732.1| aspartyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 437

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 90/342 (26%), Positives = 166/342 (48%), Gaps = 29/342 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH   D+     G  V + GWVH +R  GGIIF+ +RD  G+ Q+ A     +   F+ 
Sbjct: 8   RTHYSKDIEPEMDGDEVTVMGWVHEIRDLGGIIFVLLRDRDGLIQITAPSKKIEKDLFKS 67

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
            + ++ E V+   G V              G  E+    +++L+++++  PL    + + 
Sbjct: 68  IRKLKKESVVAFGGTVQESGK-------APGGFEIIPSFLKVLNISKQPLPLDPTEKVKA 120

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RFLDLR+ ++      ++R+++S+R  +  + F+E +TP L AS+ EG  + 
Sbjct: 121 EIDTRLDARFLDLRKPSVSAIFKIKSRMLHSVRVFLEEQGFLEINTPKLVASATEGGTEL 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F  L Q+PQ YKQ++M++G DR ++IAP FR E+  + R   E   +D+E
Sbjct: 181 FPITYFEREAF--LGQSPQLYKQIMMSTGLDRVYEIAPIFRAEEHDTLRHLNEVISIDIE 238

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT------------VSNNFLRICYDDAIRRYGT 288
            SFV+ +D++  +EN++  V E+ +   T                F R+ YD+A+    +
Sbjct: 239 ASFVDHEDVMKILENLVVRVIEDVNEHCTDALETLGRTLEVPETPFERLEYDEAVEMVNS 298

Query: 289 DKPDLRNPIIMHNVTE----HFVHSEFRVFSKILSVNPGYEV 326
               +++   +    E      +   + + S   ++ P Y +
Sbjct: 299 KGVPMKHGEDLPRAAEKALGEIMDGYYFITSWPTAIKPFYVM 340



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 12/120 (10%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
              A  PF +           D    ++  +DL+    EI+SG +R H  +++++     
Sbjct: 330 WPTAIKPFYVMPDED------DPE--RSHAFDLMYRDLEISSGAMRVHQHDLLVEKIKRQ 381

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G++     + F     AF+ GMPPH G   G +R  M L G KN+RE  LFP  +     
Sbjct: 382 GLNP----DSFESYLSAFEYGMPPHAGWGLGAERFNMTLTGLKNIRETVLFPRDRRRLTP 437


>gi|292900473|ref|YP_003539842.1| lysyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291200321|emb|CBJ47449.1| lysyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|312171252|emb|CBX79511.1| lysyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 506

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 72/338 (21%), Positives = 140/338 (41%), Gaps = 19/338 (5%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           ++G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L   G
Sbjct: 63  ELGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL---G 119

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  
Sbjct: 120 DILGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIA 176

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           +   +N  K R++I+  +R  M+  +F+E  TP++ A      AR F+          Y 
Sbjct: 177 NDDSRNTFKVRSQIMAGIRNFMVGRDFMEVETPMMQAIPGGASARPFITHHNALDLDMY- 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  +++ M++ + +D++   
Sbjct: 236 LRIAPELYLKRLVVGGFDRVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYEDLIELT 294

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           E++ R + +       V     +  +     +    +  L+      ++ +     +   
Sbjct: 295 ESLFRTLAQNVLGSTLVPYGDQQFDFGQPFAKLTMKEAILKY-RPQTDLADLADFDKSVA 353

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
            ++ L +N          K  G  R   +   E A   
Sbjct: 354 IAQSLGIN--------VEKSWGLGRVVTEIFEETAEEH 383



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 6/156 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IAQ LGI     +    ++    +E   EE  +         P       + ND+   
Sbjct: 352 VAIAQSLGINVEKSWGLGRVV-TEIFEETAEE-HLIQPTFITEYPAEVSPLARRNDVDPE 409

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGM 533
              +++    G EI +G    + ++   + F     +K+  ++           A + G+
Sbjct: 410 ITDRFEFFIGGREIGNGFSELNDAQDQAERFLQQVNAKDAGDDEAMFYDEDYVTALEHGL 469

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           PP  G+  GIDR+VML   +  +R+V LFP  +   
Sbjct: 470 PPTAGLGIGIDRMVMLFTNSHTIRDVILFPALRPGS 505


>gi|215488190|ref|YP_002330621.1| lysyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|215266262|emb|CAS10691.1| lysine tRNA synthetase, constitutive [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 505

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 138/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRSETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 21/202 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +    P  K       +  R   DM D D+      D  K  + +       +  LG I 
Sbjct: 318 LDFGKPFEKLTMREAIKKYRSETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIV 372

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE               E  +         P       + ND+      +++    G
Sbjct: 373 TEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 420

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  GID
Sbjct: 421 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VML   +  +R+V LFP  +
Sbjct: 481 RMVMLFTNSHTIRDVILFPAMR 502


>gi|153813032|ref|ZP_01965700.1| hypothetical protein RUMOBE_03440 [Ruminococcus obeum ATCC 29174]
 gi|149830834|gb|EDM85924.1| hypothetical protein RUMOBE_03440 [Ruminococcus obeum ATCC 29174]
          Length = 586

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 71/402 (17%), Positives = 147/402 (36%), Gaps = 28/402 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +I+D  G  QV    D+   E     +   +  I GL    
Sbjct: 8   VAIAGRMMFKRVMGKASFCNIQDLQGNIQVYVARDAIGEESYADFKKSDIGDIFGL---- 63

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E       TG+I + A+K+ +L+ + ++ LP           R++ R++DL  +   K
Sbjct: 64  --EGFAFRTRTGEISIHAEKMTMLTKSLQI-LPEKFHGLTDTDTRYRQRYVDLIMNQDSK 120

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           N  +KR++I+  +R  +   +F+E  TP+L +++   A                L  + +
Sbjct: 121 NVFIKRSQILKEIRNFLAGRDFMEVETPMLVSNAGGAAARPFETHYNALNEDVKLRISLE 180

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++   E++ R 
Sbjct: 181 LYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMELTESMFRY 239

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           + E+      +S              Y   + DL  P     + E         F ++  
Sbjct: 240 LAEKVCGSTKIS--------------YNGVEIDLGKPFARMTMNEAIKKYAGIDFDEVAD 285

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM-----GP 374
                ++          +    D +N +     +  L    + +D    ++ +       
Sbjct: 286 DEAAKKLADEHHIEYEAHHKKGDIINLFFEEYCEKELIQPTFIMDHPIEISPLTKKKPSD 345

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +K              +     +      +  K     ADA
Sbjct: 346 PSKVERFELFCNTWEMCNAYSELNDPIDQRERFKAQDALADA 387



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 13/134 (9%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES----LKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           F+E   E++ I      F M      S     K +D   +   +++L CN +E+ +    
Sbjct: 313 FFEEYCEKELIQPT---FIMDHPIEISPLTKKKPSDPSKV--ERFELFCNTWEMCNAYSE 367

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
            +      + F       +  +            A + GMPP GGI  GIDR+VMLL  +
Sbjct: 368 LNDPIDQRERFKAQDALADAGDEEANHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTDS 427

Query: 554 KNVREVSLFPMSQN 567
           + +R+V LFP  ++
Sbjct: 428 QAIRDVLLFPTMKS 441


>gi|300936045|ref|ZP_07150993.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300458837|gb|EFK22330.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1]
          Length = 505

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 138/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNDQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 21/202 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +    P  K       +  R   DM D D+      D  K  + +       +  LG I 
Sbjct: 318 LDFGKPFEKLTMREAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIV 372

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE               E  +         P       + ND+      +++    G
Sbjct: 373 TEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 420

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  GID
Sbjct: 421 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VML   +  +R+V LFP  +
Sbjct: 481 RMVMLFTNSHTIRDVILFPAMR 502


>gi|170682698|ref|YP_001745043.1| lysyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|170520416|gb|ACB18594.1| lysyl-tRNA synthetase LysS [Escherichia coli SMS-3-5]
          Length = 505

 Score =  213 bits (543), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 138/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     I      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGIYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 21/202 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +    P  K       +  R   DM D D+      D  K  + +       +  LG I 
Sbjct: 318 LDFGKPFEKLTMREAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIV 372

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE               E  +         P       + ND+      +++    G
Sbjct: 373 TEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 420

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  GID
Sbjct: 421 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VML   +  +R+V LFP  +
Sbjct: 481 RMVMLFTNSHTIRDVILFPAMR 502


>gi|260857013|ref|YP_003230904.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O26:H11
           str. 11368]
 gi|257755662|dbj|BAI27164.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O26:H11
           str. 11368]
 gi|323154770|gb|EFZ40968.1| lysyl-tRNA synthetase [Escherichia coli EPECa14]
          Length = 505

 Score =  213 bits (543), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 138/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 21/202 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +    P  K       +  R   DM D D+      D  K  + +       +  LG I 
Sbjct: 318 LDFGKPFEKLTMREAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIV 372

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE               E  +         P       + ND+      +++    G
Sbjct: 373 TEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGG 420

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  GID
Sbjct: 421 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VML   +  +R+V LFP  +
Sbjct: 481 RMVMLFTNSHTIRDVILFPAMR 502


>gi|254520542|ref|ZP_05132598.1| lysyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226914291|gb|EEH99492.1| lysyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 501

 Score =  213 bits (543), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 73/356 (20%), Positives = 143/356 (40%), Gaps = 29/356 (8%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH   D+     +  G+ V ++G +   R  G ++F D++D  G  Q+    D    E 
Sbjct: 44  RTHMSEDVKKDFENLEGTIVTVAGRIMSKRGQGKVVFSDVQDRDGKIQLFIKIDEVGEEA 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            KS ++  +    G  +  + E       TG++ +  +  E++  + + PLP        
Sbjct: 104 LKSYKTYDL----GDWVVATGEVF--KTKTGEVSVKVKNFELICKSLK-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
             +R++ R +D+  +   K N +KR  I+  +R  +    FIE  TP+L   +    AR 
Sbjct: 157 PDLRYRQREVDMISNPEVKTNFMKRATILKGVREFLDNRGFIEVETPMLAPIAGGASARP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y +  + +G ++ + +   FR+ +  S R   EF  +++
Sbjct: 217 FITHHNTLDIDMY-LRIAPELYLKRCIVAGLEKVYDMGRTFRN-EGMSVRHNPEFTMIEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             +F + +D++   EN++  V E+ +    V+     I +    RR           I M
Sbjct: 275 YEAFSDYNDMMEIAENMIASVCEKVNGTTKVNYQGTEIDFAPPWRR-----------ITM 323

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN----EWARSQ 351
            +  +     +F             +   +  K    +    + +N    E+A   
Sbjct: 324 VDAVKEHTGIDFNEIKSDEEAQAIAKEKNLEFKKNIKHVTKGEVLNVLFEEYAEQH 379



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 4/92 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++    G EI +     +   V  + F+     +E+ ++           A + GMP
Sbjct: 407 TERFEGFVFGREICNAYSELNDPIVQRERFNQQEKERELGDDEAYMIDEEFMSALETGMP 466

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P GG+  GIDR++M L  + ++R+V +FP  +
Sbjct: 467 PTGGLGIGIDRVIMFLTDSASIRDVIMFPTMK 498


>gi|170766125|ref|ZP_02900936.1| lysyl-tRNA synthetase LysS [Escherichia albertii TW07627]
 gi|170125271|gb|EDS94202.1| lysyl-tRNA synthetase LysS [Escherichia albertii TW07627]
          Length = 505

 Score =  213 bits (543), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 138/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 71/202 (35%), Gaps = 21/202 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +    P  K       +  R   DM D D+      D  K  + +       +  LG I 
Sbjct: 318 LDFGKPFEKLTMREAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIV 372

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE               E  +         P       + ND+      +++    G
Sbjct: 373 TEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 420

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EI +G    + +E   Q F +   +KE  ++           A + G+PP  G+  GID
Sbjct: 421 REIGNGFSELNDAEDQAQRFQDQVAAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VML   +  +R+V LFP  +
Sbjct: 481 RMVMLFTNSHTIRDVILFPAMR 502


>gi|16130792|ref|NP_417366.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
           substr. MG1655]
 gi|26249304|ref|NP_755344.1| lysyl-tRNA synthetase [Escherichia coli CFT073]
 gi|89109669|ref|AP_003449.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
           substr. W3110]
 gi|91212268|ref|YP_542254.1| lysyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110643038|ref|YP_670768.1| lysyl-tRNA synthetase [Escherichia coli 536]
 gi|117625121|ref|YP_854109.1| lysyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|157162350|ref|YP_001459668.1| lysyl-tRNA synthetase [Escherichia coli HS]
 gi|170018864|ref|YP_001723818.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|170082451|ref|YP_001731771.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
           substr. DH10B]
 gi|188493495|ref|ZP_03000765.1| lysyl-tRNA synthetase LysS [Escherichia coli 53638]
 gi|191173251|ref|ZP_03034782.1| lysyl-tRNA synthetase [Escherichia coli F11]
 gi|194436902|ref|ZP_03069002.1| lysyl-tRNA synthetase LysS [Escherichia coli 101-1]
 gi|209920344|ref|YP_002294428.1| lysyl-tRNA synthetase [Escherichia coli SE11]
 gi|218559883|ref|YP_002392796.1| lysyl-tRNA synthetase [Escherichia coli S88]
 gi|218691015|ref|YP_002399227.1| lysyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218701599|ref|YP_002409228.1| lysyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218706396|ref|YP_002413915.1| lysyl-tRNA synthetase [Escherichia coli UMN026]
 gi|227888438|ref|ZP_04006243.1| lysine tRNA synthetase, constitutive [Escherichia coli 83972]
 gi|237706467|ref|ZP_04536948.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|238902015|ref|YP_002927811.1| lysine tRNA synthetase, constitutive [Escherichia coli BW2952]
 gi|253772269|ref|YP_003035100.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254037933|ref|ZP_04871991.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|254162802|ref|YP_003045910.1| lysyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256024600|ref|ZP_05438465.1| lysyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|291284210|ref|YP_003501028.1| Lysyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|293406388|ref|ZP_06650314.1| lysyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293412248|ref|ZP_06654971.1| lysyl-tRNA synthetase [Escherichia coli B354]
 gi|293416143|ref|ZP_06658783.1| lysyl-tRNA synthetase [Escherichia coli B185]
 gi|298382124|ref|ZP_06991721.1| lysS [Escherichia coli FVEC1302]
 gi|300896215|ref|ZP_07114764.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300925130|ref|ZP_07141044.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300928175|ref|ZP_07143717.1| lysyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300947610|ref|ZP_07161782.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300954271|ref|ZP_07166734.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300980317|ref|ZP_07174971.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300995679|ref|ZP_07181207.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|301027418|ref|ZP_07190755.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|301027813|ref|ZP_07191118.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301049327|ref|ZP_07196297.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|301643761|ref|ZP_07243799.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|306812208|ref|ZP_07446406.1| lysyl-tRNA synthetase [Escherichia coli NC101]
 gi|307139577|ref|ZP_07498933.1| lysyl-tRNA synthetase [Escherichia coli H736]
 gi|312972869|ref|ZP_07787042.1| lysyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|331643579|ref|ZP_08344710.1| lysine--tRNA ligase [Escherichia coli H736]
 gi|331648635|ref|ZP_08349723.1| lysine--tRNA ligase [Escherichia coli M605]
 gi|331659019|ref|ZP_08359961.1| lysine--tRNA ligase [Escherichia coli TA206]
 gi|331664462|ref|ZP_08365368.1| lysine--tRNA ligase [Escherichia coli TA143]
 gi|331684515|ref|ZP_08385107.1| lysine--tRNA ligase [Escherichia coli H299]
 gi|67473140|sp|P0A8N3|SYK1_ECOLI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|67473141|sp|P0A8N4|SYK1_ECOL6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|26109712|gb|AAN81917.1|AE016766_5 Lysyl-tRNA synthetase [Escherichia coli CFT073]
 gi|146341|gb|AAA23959.1| herC protein [Escherichia coli]
 gi|887840|gb|AAA83071.1| lysyl tRNA synthetase (LysRS), constitutive [Escherichia coli]
 gi|1789256|gb|AAC75928.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
           substr. MG1655]
 gi|85675702|dbj|BAE76955.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K12
           substr. W3110]
 gi|91073842|gb|ABE08723.1| lysine tRNA synthetase [Escherichia coli UTI89]
 gi|110344630|gb|ABG70867.1| lysyl-tRNA synthetase [Escherichia coli 536]
 gi|115514245|gb|ABJ02320.1| lysine tRNA synthetase, constitutive [Escherichia coli APEC O1]
 gi|157068030|gb|ABV07285.1| lysyl-tRNA synthetase [Escherichia coli HS]
 gi|169753792|gb|ACA76491.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|169890286|gb|ACB03993.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
           substr. DH10B]
 gi|188488694|gb|EDU63797.1| lysyl-tRNA synthetase LysS [Escherichia coli 53638]
 gi|190906502|gb|EDV66110.1| lysyl-tRNA synthetase [Escherichia coli F11]
 gi|194424384|gb|EDX40371.1| lysyl-tRNA synthetase LysS [Escherichia coli 101-1]
 gi|209760614|gb|ACI78619.1| lysine tRNA synthetase [Escherichia coli]
 gi|209913603|dbj|BAG78677.1| lysyl-tRNA synthase [Escherichia coli SE11]
 gi|218366652|emb|CAR04406.1| lysine tRNA synthetase, constitutive [Escherichia coli S88]
 gi|218371585|emb|CAR19424.1| lysine tRNA synthetase, constitutive [Escherichia coli IAI39]
 gi|218428579|emb|CAR09360.1| lysine tRNA synthetase, constitutive [Escherichia coli ED1a]
 gi|218433493|emb|CAR14396.1| lysine tRNA synthetase, constitutive [Escherichia coli UMN026]
 gi|222034585|emb|CAP77327.1| Lysyl-tRNA synthetase [Escherichia coli LF82]
 gi|226839557|gb|EEH71578.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|226899507|gb|EEH85766.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|227834707|gb|EEJ45173.1| lysine tRNA synthetase, constitutive [Escherichia coli 83972]
 gi|238861694|gb|ACR63692.1| lysine tRNA synthetase, constitutive [Escherichia coli BW2952]
 gi|242378422|emb|CAQ33202.1| lysyl tRNA synthetase (LysRSs), constitutive, subunit of lysyl-tRNA
           synthetase, constitutive [Escherichia coli BL21(DE3)]
 gi|253323313|gb|ACT27915.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974703|gb|ACT40374.1| lysine tRNA synthetase, constitutive [Escherichia coli B str.
           REL606]
 gi|253978869|gb|ACT44539.1| lysine tRNA synthetase, constitutive [Escherichia coli BL21(DE3)]
 gi|260448064|gb|ACX38486.1| lysyl-tRNA synthetase [Escherichia coli DH1]
 gi|281179895|dbj|BAI56225.1| lysyl-tRNA synthetase [Escherichia coli SE15]
 gi|284922838|emb|CBG35927.1| lysyl-tRNA synthetase [Escherichia coli 042]
 gi|290764083|gb|ADD58044.1| Lysyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|291426394|gb|EFE99426.1| lysyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291432332|gb|EFF05314.1| lysyl-tRNA synthetase [Escherichia coli B185]
 gi|291469019|gb|EFF11510.1| lysyl-tRNA synthetase [Escherichia coli B354]
 gi|294492859|gb|ADE91615.1| lysyl-tRNA synthetase LysS [Escherichia coli IHE3034]
 gi|298277264|gb|EFI18780.1| lysS [Escherichia coli FVEC1302]
 gi|299879075|gb|EFI87286.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300298926|gb|EFJ55311.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300304787|gb|EFJ59307.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300318732|gb|EFJ68516.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300359949|gb|EFJ75819.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300394926|gb|EFJ78464.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300409325|gb|EFJ92863.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300418732|gb|EFK02043.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300452807|gb|EFK16427.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300463815|gb|EFK27308.1| lysyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|301077860|gb|EFK92666.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|305854246|gb|EFM54684.1| lysyl-tRNA synthetase [Escherichia coli NC101]
 gi|307554866|gb|ADN47641.1| lysine tRNA synthetase [Escherichia coli ABU 83972]
 gi|307625537|gb|ADN69841.1| lysyl-tRNA synthetase [Escherichia coli UM146]
 gi|309703250|emb|CBJ02585.1| lysyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310332811|gb|EFQ00025.1| lysyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|312947423|gb|ADR28250.1| lysyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315137489|dbj|BAJ44648.1| lysyl-tRNA synthetase [Escherichia coli DH1]
 gi|315289448|gb|EFU48843.1| lysyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315293878|gb|EFU53230.1| lysyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315295677|gb|EFU54997.1| lysyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|315614955|gb|EFU95593.1| lysyl-tRNA synthetase [Escherichia coli 3431]
 gi|320195008|gb|EFW69637.1| lysyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|320656576|gb|EFX24472.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320662096|gb|EFX29497.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|323935879|gb|EGB32178.1| lysyl-tRNA synthetase [Escherichia coli E1520]
 gi|323941590|gb|EGB37770.1| lysyl-tRNA synthetase [Escherichia coli E482]
 gi|323951672|gb|EGB47547.1| lysyl-tRNA synthetase [Escherichia coli H252]
 gi|323957390|gb|EGB53112.1| lysyl-tRNA synthetase [Escherichia coli H263]
 gi|323960814|gb|EGB56435.1| lysyl-tRNA synthetase [Escherichia coli H489]
 gi|324005541|gb|EGB74760.1| lysyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|324011761|gb|EGB80980.1| lysyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|324017286|gb|EGB86505.1| lysyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|330908922|gb|EGH37436.1| lysyl-tRNA synthetase (class 2) [Escherichia coli AA86]
 gi|331037050|gb|EGI09274.1| lysine--tRNA ligase [Escherichia coli H736]
 gi|331042382|gb|EGI14524.1| lysine--tRNA ligase [Escherichia coli M605]
 gi|331053601|gb|EGI25630.1| lysine--tRNA ligase [Escherichia coli TA206]
 gi|331058393|gb|EGI30374.1| lysine--tRNA ligase [Escherichia coli TA143]
 gi|331078130|gb|EGI49336.1| lysine--tRNA ligase [Escherichia coli H299]
 gi|332344785|gb|AEE58119.1| lysyl-tRNA synthetase LysS [Escherichia coli UMNK88]
          Length = 505

 Score =  213 bits (543), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 138/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 21/202 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +    P  K       +  R   DM D D+      D  K  + +       +  LG I 
Sbjct: 318 LDFGKPFEKLTMREAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIV 372

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE               E  +         P       + ND+      +++    G
Sbjct: 373 TEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 420

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  GID
Sbjct: 421 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VML   +  +R+V LFP  +
Sbjct: 481 RMVMLFTNSHTIRDVILFPAMR 502


>gi|317493836|ref|ZP_07952253.1| lysyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918163|gb|EFV39505.1| lysyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 505

 Score =  213 bits (543), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 76/354 (21%), Positives = 141/354 (39%), Gaps = 31/354 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y      +L   D+   V ++G +   R  G   F+ ++D  G  Q+    D     +  
Sbjct: 53  YDEKDKAEL--EDLNVEVSVAGRMMTRRIMGKAAFVTLQDMGGRIQLYVARDDLPEGLYN 110

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++    +       TG++ +   +I +L+ A   PLP        + 
Sbjct: 111 DQFKKWDL---GDIIGARGKVF--RTQTGELSIHCTEIRLLTKALR-PLPDKFHGLADQE 164

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL  +   +   + R++ + ++R  M+ + F+E  TP++        AR F+
Sbjct: 165 TRYRQRYLDLIANEESRETFRIRSKTLAAIRSFMVNKGFMEVETPMMQVIPGGASARPFI 224

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M
Sbjct: 225 THHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYM 282

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E++ R + +E                  +I +YG    D   P I   
Sbjct: 283 AYADYKDLIVLTEDLFRTLTQEVLG--------------SSIVQYGDQTFDFGKPFIKMT 328

Query: 302 VTEHFVHSEFRVFSKIL-----SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
           + E   H    +  + L     +      +     K  G  R  C+  +E A  
Sbjct: 329 MKESINHYRPDIKMEDLDDLEKATKIAESLGIKIEKSWGLGRIQCEIFDETAEK 382



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 67/195 (34%), Gaps = 18/195 (9%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE--LGIINCNCFEFC 435
                    ++  ++    D       D  K    A      I +   LG I C  F+  
Sbjct: 320 FGKPFIKMTMKESINHYRPDIKMEDLDDLEKATKIAESLGIKIEKSWGLGRIQCEIFD-- 377

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
                        EK +         P       + ND       +++    G EI +G 
Sbjct: 378 ----------ETAEKNLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGF 427

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLL 551
              + +E   + F +   +K+  ++           + + G+PP  G+  GIDR++ML  
Sbjct: 428 SELNDAEDQAERFQDQVRAKDEGDDEAMFYDEDYVTSLEHGLPPTAGLGIGIDRMMMLFT 487

Query: 552 GAKNVREVSLFPMSQ 566
            +  +R+V LFP  +
Sbjct: 488 NSHTIRDVILFPAMR 502


>gi|323188712|gb|EFZ73997.1| lysyl-tRNA synthetase [Escherichia coli RN587/1]
          Length = 505

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 138/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLLEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 21/202 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +    P  K       +  R   DM D D+      D  K  + +       +  LG I 
Sbjct: 318 LDFGKPFEKLTMREAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIV 372

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE               E  +         P       + ND+      +++    G
Sbjct: 373 TEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 420

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  GID
Sbjct: 421 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VML   +  +R+V LFP  +
Sbjct: 481 RMVMLFTNSHTIRDVILFPAMR 502


>gi|24114145|ref|NP_708655.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30064202|ref|NP_838373.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|74313449|ref|YP_311868.1| lysyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|110806794|ref|YP_690314.1| lysyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|157155962|ref|YP_001464228.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
 gi|187730899|ref|YP_001881660.1| lysyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|191165971|ref|ZP_03027807.1| lysyl-tRNA synthetase LysS [Escherichia coli B7A]
 gi|193070569|ref|ZP_03051508.1| lysyl-tRNA synthetase LysS [Escherichia coli E110019]
 gi|194426362|ref|ZP_03058917.1| lysyl-tRNA synthetase LysS [Escherichia coli B171]
 gi|218555438|ref|YP_002388351.1| lysyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218696485|ref|YP_002404152.1| lysyl-tRNA synthetase [Escherichia coli 55989]
 gi|256019312|ref|ZP_05433177.1| lysyl-tRNA synthetase [Shigella sp. D9]
 gi|260845558|ref|YP_003223336.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O103:H2
           str. 12009]
 gi|260869567|ref|YP_003235969.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O111:H-
           str. 11128]
 gi|293449212|ref|ZP_06663633.1| lysyl-tRNA synthetase [Escherichia coli B088]
 gi|300815659|ref|ZP_07095883.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300820693|ref|ZP_07100844.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300906561|ref|ZP_07124252.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|301303047|ref|ZP_07209174.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301327290|ref|ZP_07220546.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|307310491|ref|ZP_07590139.1| lysyl-tRNA synthetase [Escherichia coli W]
 gi|309793961|ref|ZP_07688386.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|331654387|ref|ZP_08355387.1| lysine--tRNA ligase [Escherichia coli M718]
 gi|331669624|ref|ZP_08370470.1| lysine--tRNA ligase [Escherichia coli TA271]
 gi|331678876|ref|ZP_08379550.1| lysine--tRNA ligase [Escherichia coli H591]
 gi|332280426|ref|ZP_08392839.1| lysyl-tRNA synthetase [Shigella sp. D9]
 gi|39932371|sp|Q83JU6|SYK1_SHIFL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123047932|sp|Q0T106|SYK_SHIF8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238691768|sp|B2U0Q7|SYK_SHIB3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|24053284|gb|AAN44362.1| lysine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30042459|gb|AAP18183.1| lysine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|73856926|gb|AAZ89633.1| lysine tRNA synthetase, constitutive [Shigella sonnei Ss046]
 gi|110616342|gb|ABF05009.1| lysine tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|157077992|gb|ABV17700.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
 gi|187427891|gb|ACD07165.1| lysyl-tRNA synthetase LysS [Shigella boydii CDC 3083-94]
 gi|190903919|gb|EDV63632.1| lysyl-tRNA synthetase LysS [Escherichia coli B7A]
 gi|192956152|gb|EDV86616.1| lysyl-tRNA synthetase LysS [Escherichia coli E110019]
 gi|194415670|gb|EDX31937.1| lysyl-tRNA synthetase LysS [Escherichia coli B171]
 gi|218353217|emb|CAU99132.1| lysine tRNA synthetase, constitutive [Escherichia coli 55989]
 gi|218362206|emb|CAQ99824.1| lysine tRNA synthetase, constitutive [Escherichia coli IAI1]
 gi|257760705|dbj|BAI32202.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O103:H2
           str. 12009]
 gi|257765923|dbj|BAI37418.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O111:H-
           str. 11128]
 gi|281602222|gb|ADA75206.1| Lysyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|291322302|gb|EFE61731.1| lysyl-tRNA synthetase [Escherichia coli B088]
 gi|300401600|gb|EFJ85138.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300526957|gb|EFK48026.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300531588|gb|EFK52650.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300841711|gb|EFK69471.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300846153|gb|EFK73913.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|306909386|gb|EFN39881.1| lysyl-tRNA synthetase [Escherichia coli W]
 gi|308122368|gb|EFO59630.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|313647929|gb|EFS12375.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|315062194|gb|ADT76521.1| lysine tRNA synthetase, constitutive [Escherichia coli W]
 gi|315256772|gb|EFU36740.1| lysyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|320175923|gb|EFW51001.1| lysyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320184567|gb|EFW59368.1| lysyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320202549|gb|EFW77119.1| lysyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323162520|gb|EFZ48370.1| lysyl-tRNA synthetase [Escherichia coli E128010]
 gi|323167905|gb|EFZ53595.1| lysyl-tRNA synthetase [Shigella sonnei 53G]
 gi|323173887|gb|EFZ59516.1| lysyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323180333|gb|EFZ65885.1| lysyl-tRNA synthetase [Escherichia coli 1180]
 gi|323183443|gb|EFZ68840.1| lysyl-tRNA synthetase [Escherichia coli 1357]
 gi|323377222|gb|ADX49490.1| lysyl-tRNA synthetase [Escherichia coli KO11]
 gi|323946625|gb|EGB42648.1| lysyl-tRNA synthetase [Escherichia coli H120]
 gi|324119930|gb|EGC13809.1| lysyl-tRNA synthetase [Escherichia coli E1167]
 gi|331047769|gb|EGI19846.1| lysine--tRNA ligase [Escherichia coli M718]
 gi|331063292|gb|EGI35205.1| lysine--tRNA ligase [Escherichia coli TA271]
 gi|331073706|gb|EGI45027.1| lysine--tRNA ligase [Escherichia coli H591]
 gi|332102778|gb|EGJ06124.1| lysyl-tRNA synthetase [Shigella sp. D9]
 gi|332752926|gb|EGJ83310.1| lysyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|332753725|gb|EGJ84104.1| lysyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332754304|gb|EGJ84670.1| lysyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332765820|gb|EGJ96033.1| lysyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|332999678|gb|EGK19263.1| lysyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333000273|gb|EGK19856.1| lysyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333000724|gb|EGK20299.1| lysyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333015180|gb|EGK34523.1| lysyl-tRNA synthetase [Shigella flexneri K-304]
 gi|333015220|gb|EGK34562.1| lysyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 505

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 138/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 21/202 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +    P  K       +  R   DM D D+      D  K  + +       +  LG I 
Sbjct: 318 LDFGKPFEKLTMREAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIV 372

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE               E  +         P       + ND+      +++    G
Sbjct: 373 TEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGG 420

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  GID
Sbjct: 421 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VML   +  +R+V LFP  +
Sbjct: 481 RMVMLFTNSHTIRDVILFPAMR 502


>gi|300814671|ref|ZP_07094922.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511290|gb|EFK38539.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 640

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 75/337 (22%), Positives = 141/337 (41%), Gaps = 27/337 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVL 71
               G  V ++G V   R HG I FLD++D+ G  QV A  D     +E  K +    ++
Sbjct: 50  EEFDGKDVCIAGRVMSKRRHGKICFLDLQDYKGRIQVFARKDILLENYEDVKGLDMGDII 109

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G V    A         G++ ++A+K+++LS + ++ LP          +R++ R++
Sbjct: 110 GVKGKVFKTEA---------GEVTVNAEKLDLLSKSLQI-LPEKFHGLKDPDLRYRQRYV 159

Query: 132 DLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQG 189
           DL  +   K +  KRT+II ++R  +  + FIE  TPIL T +    AR FL        
Sbjct: 160 DLIVNPEIKEVFLKRTKIIKAIRQYLDDKGFIEVETPILGTVAGGANARPFLTHHNTLDI 219

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  A + + + L+  GFD+ +++   FR+E   +   P EF  +++  ++V+ D++
Sbjct: 220 DM-QLRIANELFLKRLIVGGFDKVYEMGKMFRNEGMDTRHNP-EFTNIELYQAYVDMDEM 277

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           +   EN+     ++    + ++     I      RR           + M    + +   
Sbjct: 278 MAITENIFEYAAQKVLGTDKITYQGTEISLKAPWRR-----------MSMIEAVKEYAGV 326

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           +F             +   +  + G           E
Sbjct: 327 DFDKVQTDEQAQQLAKEKGVEVEEGSSWGKILSEFFE 363



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 7/130 (5%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHM 500
           F+E   EEK +       T     +  L   D    +   +++   N +E A+     + 
Sbjct: 361 FFETFCEEKLVQPTF--ITGHPVDISPLAKKDPKDTRLTRRFEAFINTWEFANAFSELND 418

Query: 501 SEVMLQAFS----NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                + F           E           A + G+PP GG+  G+DR++MLL    ++
Sbjct: 419 PIDQRERFEAQVREHEKGDEEAHPMDSDFINAIEVGLPPTGGLGIGVDRMIMLLTDQPSI 478

Query: 557 REVSLFPMSQ 566
           R++ LFP  +
Sbjct: 479 RDIILFPTMK 488


>gi|82545487|ref|YP_409434.1| lysyl-tRNA synthetase [Shigella boydii Sb227]
 gi|123728331|sp|Q31WF2|SYK_SHIBS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81246898|gb|ABB67606.1| lysine tRNA synthetase, constitutive [Shigella boydii Sb227]
 gi|332090907|gb|EGI95998.1| lysyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 505

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 138/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 21/202 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +    P  K       +  R   DM D D+      D  K  + +       +  LG I 
Sbjct: 318 LDFGKPFEKLTMREAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIV 372

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE               E  +         P       + ND+      +++    G
Sbjct: 373 TEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGG 420

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  GID
Sbjct: 421 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VML   +  +R+V LFP  +
Sbjct: 481 RMVMLFTNSHTIRDVILFPAMR 502


>gi|23097543|ref|NP_691009.1| lysyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|39932206|sp|Q8EU10|SYK_OCEIH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|22775766|dbj|BAC12044.1| lysine-tRNA ligase [Oceanobacillus iheyensis HTE831]
          Length = 493

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 71/386 (18%), Positives = 153/386 (39%), Gaps = 30/386 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           + +Y ++S  +L   +    V ++G +   R  G   F  I+D  G  Q+    D    +
Sbjct: 41  IEKYDSYSKEEL--EETTDEVTIAGRLMTKRGKGKAGFAHIQDLSGQIQLYVRKDMIGDD 98

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             +  +S  +  I G+        +      G+I + A++ ++L+ +   PLP       
Sbjct: 99  AYEVFKSADLGDIVGV------TGVMFKTNVGEISVKAKQFQLLTKSLR-PLPEKYHGLK 151

Query: 121 PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGAR 178
               R++ R+LDL  +   +     R++II SMR  +  + F+E  TP++ +      AR
Sbjct: 152 DIEQRYRQRYLDLITNPDSRGTFVSRSKIIQSMREYLNGQGFLEVETPMMHSIPGGASAR 211

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+          Y +  A + + + LM  G ++ ++I   FR+E   +   P EF  ++
Sbjct: 212 PFITHHNALDIELY-MRIAIELHLKRLMVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIE 269

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +  ++ +  DI+   EN++  + ++     T++              YG  + +L     
Sbjct: 270 LYEAYADYHDIMELTENLVAHIAKQVHGSTTIT--------------YGEHEINLEPKWT 315

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
             ++ +    +    F K +S      +          + ++   +NE+   + +  L  
Sbjct: 316 RLHIVDAVKDATGVDFWKEVSDEEARALAKEHGVQVTESMSYGHVVNEFFEQKVEETLIQ 375

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNT 384
             +     G+   + P+AK       
Sbjct: 376 PTFI---HGHPVEISPLAKKNKEDER 398



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 71/192 (36%), Gaps = 9/192 (4%)

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
           + +N E    RL + D            +     A A   +A+E G+       +  +++
Sbjct: 306 HEINLEPKWTRLHIVDAVKDATGVDFWKEVSDEEARA---LAKEHGVQVTESMSYGHVVN 362

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
             F+E   EE  I          +    + K  +       +++L   G E A+     +
Sbjct: 363 -EFFEQKVEETLIQPTFIHGHPVEISPLAKKNKEDERF-TDRFELFIVGREHANAFSELN 420

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                   F      +    +           A + GMPP GG+  G+DR+VMLL  + +
Sbjct: 421 DPIDQRARFEAQVKERAEGNDEAHYMDEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSPS 480

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  + 
Sbjct: 481 IRDVLLFPQMRT 492


>gi|193063477|ref|ZP_03044566.1| lysyl-tRNA synthetase LysS [Escherichia coli E22]
 gi|192930754|gb|EDV83359.1| lysyl-tRNA synthetase LysS [Escherichia coli E22]
          Length = 505

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 138/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 70/202 (34%), Gaps = 21/202 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +    P  K       +  R   DM D D+      D  K  + +       +  LG I 
Sbjct: 318 LDFGKPFEKLTMREAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIV 372

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE               E  +         P       + ND+      +++    G
Sbjct: 373 TEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGG 420

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EI +G    + +E   Q F     +K+  ++           A + G+PP  G+  GID
Sbjct: 421 REIGNGFSELNDAEDQAQRFLEQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VML   +  +R+V LFP  +
Sbjct: 481 RMVMLFTNSHTIRDVILFPAMR 502


>gi|311029015|ref|ZP_07707105.1| lysyl-tRNA synthetase [Bacillus sp. m3-13]
 gi|311032311|ref|ZP_07710401.1| lysyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 496

 Score =  213 bits (542), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 140/378 (37%), Gaps = 31/378 (8%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++    +      V L+G +   R  G   F  I+D  G  Q+    D+   E  +   
Sbjct: 48  GEIEKEQLDEKEIAVTLAGRIMTKRGKGKAGFAHIQDLTGQIQLYIRKDAVGDEAYEIFN 107

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           S  +  I G+               G++ + A   E+L+ A   PLP           R+
Sbjct: 108 SADIGDIVGV------TGFVFKTKVGELSIKATSFELLTKALR-PLPEKYHGLKDVEQRY 160

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL  +   +     R++II +MR  +    ++E  TP++ + +    AR F+   
Sbjct: 161 RQRYLDLITNPESRETFIARSKIIQAMRRYLDDHGYLEVETPMMHSIAGGASARPFITHH 220

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ 
Sbjct: 221 NTLDMTLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYA 278

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +  DI++  EN++  + +E      V      I      +R             M +  +
Sbjct: 279 DYKDIMSLTENLVAHIAKEVLGSTKVQYADSEIDLTPEWKRLH-----------MVDAVK 327

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                +F             +   I       +  F   +NE+   + +  L    +   
Sbjct: 328 EATGVDFWQQMTDEEARALAKEHGIQI---TEHMQFGHILNEFFEQKVEETLIQPTFIY- 383

Query: 365 ESGNVAGMGPVAKHLNIV 382
             G+   + P+AK     
Sbjct: 384 --GHPVEISPLAKKNAED 399



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 12/158 (7%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDL 474
             +A+E GI      +F  I++  F+E   EE  I       +P  +    +      D 
Sbjct: 344 RALAKEHGIQITEHMQFGHILN-EFFEQKVEETLIQPTFIYGHPVEISP--LAKKNAEDP 400

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQ 530
                 +++L   G E A+     +      + F      KE               A +
Sbjct: 401 R--FTDRFELFIVGREHANAFTELNDPIDQKERFEAQLKEKEQGNDEAHEMDHDFIEALE 458

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            GMPP GG+  GIDR+VMLL  + ++R+V LFP  ++ 
Sbjct: 459 YGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPQMRHR 496


>gi|60683052|ref|YP_213196.1| lysyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|253566194|ref|ZP_04843648.1| lysyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|265766944|ref|ZP_06094773.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|81313892|sp|Q5L9E5|SYK_BACFN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|60494486|emb|CAH09283.1| putative lysyl-tRNA synthetase, heat inducible [Bacteroides
           fragilis NCTC 9343]
 gi|251945298|gb|EES85736.1| lysyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|263253321|gb|EEZ24797.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301164518|emb|CBW24077.1| putative lysyl-tRNA synthetase, heat inducible [Bacteroides
           fragilis 638R]
          Length = 575

 Score =  213 bits (542), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 98/577 (16%), Positives = 189/577 (32%), Gaps = 125/577 (21%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +    +    V ++G +   R  G   F++++D  G  QV    D  C   
Sbjct: 36  NAFSTDIKAEFKDDETPRQVSVAGRMMSRRIMGKASFIELQDSKGRIQVYITRDDICPGE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + AQK+ +L+ + +    V  +    
Sbjct: 96  DKEMYNTVFKRLLDLGDFIGIEGFVFRTQMGEISIHAQKLTVLAKSIKPLPIVKYKDGVT 155

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R++DL  +  +    +KR+++ +SMR    ++ ++E  TPIL A + 
Sbjct: 156 YDSFEDPELRYRQRYVDLAVNEGVKDIFIKRSKVYSSMREYFNSKGYMEVETPILQAIAG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y +  A + Y + L+  GF+  ++I   FR+E          
Sbjct: 216 GAAARPFMTHHNALDIPLY-MRIASELYLKRLIVGGFEGVYEIGKNFRNEG--------- 265

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
                           ++   N                  F  +    A + Y     + 
Sbjct: 266 ----------------MDRTHN----------------PEFTCMEIYVAYKDYNWMM-EF 292

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
              +I     +    +E +V   I++    Y+   +                        
Sbjct: 293 TEKMIEKICLDVNGTTEVKVGDNIINFKAPYKRVTM------------------------ 328

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
             L  I             G     +N      +  +L+M+  D+               
Sbjct: 329 --LGAIK---------EHTGYDLTGMNEEQIREVCKKLNMEIDDTMGK------------ 365

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               + I  E         +  +I D+P               +P T        L    
Sbjct: 366 GKLIDEIFGEFC--EGTYIQPTFITDYP------------IEMSPLTKKHRDNPEL---- 407

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
                  +++L+ NG E+ +     +     L+ F +     E  ++          RA 
Sbjct: 408 -----TERFELMVNGKELCNAYSELNDPIDQLERFEDQMKLSEKGDDEAMIIDKDFVRAL 462

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP  G+  G+DR+ ML+ G   ++EV  FP  +
Sbjct: 463 EYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFPQMR 499


>gi|218550137|ref|YP_002383928.1| lysyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|218357678|emb|CAQ90319.1| lysine tRNA synthetase, constitutive [Escherichia fergusonii ATCC
           35469]
 gi|323978819|gb|EGB73900.1| lysyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324115094|gb|EGC09059.1| lysyl-tRNA synthetase [Escherichia fergusonii B253]
 gi|325498451|gb|EGC96310.1| lysyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 505

 Score =  213 bits (542), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 138/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNDQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 21/202 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +    P  K       +  R   DM D D+      D  K  + +       +  LG I 
Sbjct: 318 LDFGKPFEKLTMREAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIV 372

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE               E  +         P       + ND+      +++    G
Sbjct: 373 TEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 420

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  GID
Sbjct: 421 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VML   +  +R+V LFP  +
Sbjct: 481 RMVMLFTNSHTIRDVILFPAMR 502


>gi|323966690|gb|EGB62122.1| lysyl-tRNA synthetase [Escherichia coli M863]
 gi|327251652|gb|EGE63338.1| lysyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 505

 Score =  213 bits (542), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 138/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNDQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 21/202 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +    P  K       +  R   DM D D+      D  K  + +       +  LG I 
Sbjct: 318 LDFGKPFEKLTMREAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIV 372

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE               E  +         P       + ND+      +++    G
Sbjct: 373 TEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 420

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  GID
Sbjct: 421 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VML   +  +R+V LFP  +
Sbjct: 481 RMVMLFTNSHTIRDVILFPAMR 502


>gi|53715094|ref|YP_101086.1| lysyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|81381368|sp|Q64PM9|SYK_BACFR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|52217959|dbj|BAD50552.1| lysyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 575

 Score =  213 bits (542), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 98/577 (16%), Positives = 189/577 (32%), Gaps = 125/577 (21%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +    +    V ++G +   R  G   F++++D  G  QV    D  C   
Sbjct: 36  NAFSTDIKAEFKDDETPRQVSVAGRMMSRRIMGKASFIELQDSKGRIQVYITRDDICPGE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + AQK+ +L+ + +    V  +    
Sbjct: 96  DKEMYNTVFKRLLDLGDFIGIEGFVFRTQMGEISIHAQKLTVLAKSIKPLPIVKYKDGVT 155

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R++DL  +  +    +KR+++ +SMR    ++ ++E  TPIL A + 
Sbjct: 156 YDSFEDPELRYRQRYVDLAVNEGVKDIFIKRSKVYSSMREYFNSKGYMEVETPILQAIAG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y +  A + Y + L+  GF+  ++I   FR+E          
Sbjct: 216 GAAARPFMTHHNALDIPLY-MRIASELYLKRLIVGGFEGVYEIGKNFRNEG--------- 265

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
                           ++   N                  F  +    A + Y     + 
Sbjct: 266 ----------------MDRTHN----------------PEFTCMEIYVAYKDYNWMM-EF 292

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
              +I     +    +E +V   I++    Y+   +                        
Sbjct: 293 TEKMIEKICLDVNGTTEVKVGDNIINFKAPYKRVTM------------------------ 328

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
             L  I             G     +N      +  +L+M+  D+               
Sbjct: 329 --LGAIK---------EHTGYDLTGMNEEQIREVCKKLNMEIDDTMGK------------ 365

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               + I  E         +  +I D+P               +P T        L    
Sbjct: 366 GKLIDEIFGEFC--EGTYIQPTFITDYP------------IEMSPLTKKHRDNPEL---- 407

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
                  +++L+ NG E+ +     +     L+ F +     E  ++          RA 
Sbjct: 408 -----TERFELMVNGKELCNAYSELNDPIDQLERFEDQMKLSEKGDDEAMIIDKDFVRAL 462

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP  G+  G+DR+ ML+ G   ++EV  FP  +
Sbjct: 463 EYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFPQMR 499


>gi|317499616|ref|ZP_07957878.1| lysyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893091|gb|EFV15311.1| lysyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 638

 Score =  213 bits (542), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 131/350 (37%), Gaps = 26/350 (7%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   ++        G  V ++G +   R  G   F +++D  G  Q     D    E  
Sbjct: 38  THHSKEIKDNFEELEGKEVAVAGRLMFKRVMGKASFCNVQDLQGGIQAYVARDEIGVESY 97

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  +   +  I G+      +       TG+  + A+++ +LS + + PLP         
Sbjct: 98  QDFKKMDIGDIVGI------KGKVFATKTGEKSIHAEEVILLSKSLK-PLPEKFHGLTDT 150

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             R++ R++DL  +   K   +KR++II+ +R  +  + F+E  TP+L +++   +    
Sbjct: 151 DTRYRQRYVDLIMNEESKEVFIKRSKIISKIRSYLDGQGFMEVETPMLVSNAGGASARPF 210

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  + + Y + L+  G ++ ++I   FR+E   +   P EF  +++  
Sbjct: 211 ETHYNALSEDVKLRISLELYLKRLIVGGLEKVYEIGRVFRNEGVDTRHNP-EFTLMELYQ 269

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +   +++  EN+ R + EE   G  +      I              DL  P     
Sbjct: 270 AYTDYHGMMDLTENLYRYLAEEVCGGTKIQYKDFEI--------------DLGKPFERIT 315

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           + +         F +I ++                     D +N +    
Sbjct: 316 MVDAVKKYSGVDFKEIKTLEEARAAAEEHHVEYEERHKRGDILNLFFEEF 365



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 57/160 (35%), Gaps = 30/160 (18%)

Query: 417 RNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           R+     L +     +     +  ++MD P               +P T  +        
Sbjct: 351 RHKRGDILNLFFEEFVEDKLIQPTFVMDHP------------VEISPLTKRKPEDPDY-- 396

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYR 527
                    +++   NG+E+A+     +      + F          +            
Sbjct: 397 -------VERFEFFMNGWEMANAYSELNDPIDQRERFKAQEELLAQGDEEANTTDEDFLN 449

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++
Sbjct: 450 ALEIGMPPTGGIGFGIDRMVMLLTNSTAIRDVLLFPTMKS 489


>gi|75909357|ref|YP_323653.1| lysyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|123731434|sp|Q3M8C8|SYK_ANAVT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|75703082|gb|ABA22758.1| Lysyl-tRNA synthetase, class-2 [Anabaena variabilis ATCC 29413]
          Length = 561

 Score =  213 bits (542), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 64/346 (18%), Positives = 136/346 (39%), Gaps = 33/346 (9%)

Query: 2   HRYR---THSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           + YR   TH    L           +V + V ++G +   R  G + F  + D  G  Q+
Sbjct: 25  YAYRWESTHHAAQLQEKFADLTSGEEVDTEVAIAGRIMARRVFGKLAFFTLEDETGTIQL 84

Query: 51  VANP----DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV 106
                   +S     A +      L   G ++             G++ +  ++  IL+ 
Sbjct: 85  YLEKNRIQESMAETDADAFNHLKQLTDVGDILGAKGTIKRTE--KGELSIYVKEYTILTK 142

Query: 107 AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRT-RIINSMRCRMIAENFIECS 165
           +  LPLP         + R++ R++DL  +   +   +R  +I   +R  +   +F+E  
Sbjct: 143 SL-LPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRRRAQITAGIRRYLEQRDFLEIE 201

Query: 166 TPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
           TP+L + +    AR F+      +   Y L  A + + + L+  GF++ F++   FR+E 
Sbjct: 202 TPVLQSETGGADARPFITYHNTLEMELY-LRIATELHLKRLIVGGFEKVFELGRVFRNEG 260

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
             +   P EF  +++  ++ + +D++   E ++  V ++      ++     +      R
Sbjct: 261 ISTRHNP-EFTSIEIYQAYADYNDMMALTEGIITTVAQDVLGTLQITYQGETVDLTPPWR 319

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           R           + MH++ + +   +F  F  +       +   IP
Sbjct: 320 R-----------VTMHDLVKEYTGLDFHSFQTLEEAKSASKNAGIP 354



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 53/153 (34%), Gaps = 30/153 (19%)

Query: 420 IAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           I + L +     +  N  +  +++D+P      E   +   H                  
Sbjct: 362 IGKILNLAFEEKVEANLIQPTFVIDYPV-----EISPLAKPHR----------------S 400

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQ 530
                 +++L   G E A+            +        K       +        A +
Sbjct: 401 QPGLVERFELFIVGRETANSFSELTDPIDQRERLEAQAAKKAAGDLEAQGVDEDFLTALE 460

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP GG+  GIDR+VMLL  + ++R+V  FP
Sbjct: 461 YGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFP 493


>gi|229917390|ref|YP_002886036.1| lysyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229468819|gb|ACQ70591.1| lysyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 496

 Score =  213 bits (542), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 71/359 (19%), Positives = 142/359 (39%), Gaps = 36/359 (10%)

Query: 2   HRY-RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ R+   G+L            ++    V L+G +   R  G + F  I+D  G  Q+
Sbjct: 31  HRFDRSAHAGELHEQYESIEKEALAEQDVEVTLAGRIMTKRGKGKVFFAHIQDVTGQIQI 90

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               +    E     +S  +    G ++    +    N+  G++ +  ++ E+L+ A   
Sbjct: 91  YVRKNDVGDEPFDLFKSSDL----GDIVGVKGKLFKTNV--GELSIHVEEFELLTKALR- 143

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           R++ R+LDL  +   +   + R+RII+ +R  +  + ++E  TP+L
Sbjct: 144 PLPDKYHGLKDVEQRYRQRYLDLITNQDSRQTFILRSRIISEIRNFLNQKGYLEVETPML 203

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T +    AR FL          Y +  A + + + L+  G +R ++I   FR+E   + 
Sbjct: 204 HTIAGGAAARPFLTHHNALDMELY-MRIAIELHLKRLIVGGLERVYEIGRVFRNEGISTR 262

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  +++  ++ + +DI++  E ++  V +E                     +YG 
Sbjct: 263 HNP-EFTMIELYEAYADYNDIMDLTEELVAHVAKEVLGTTD--------------VQYGE 307

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
           D   L       ++ +         F + +S      +          +  F   +NE+
Sbjct: 308 DTIHLGIGWKRAHMVDLVKEETGVDFWQQMSDEEARALAKEHGVEVQDHMTFGHIVNEF 366



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 6/154 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E G+   +   F  I++  F+E   EE  +          +    + K N+    
Sbjct: 343 RALAKEHGVEVQDHMTFGHIVN-EFFEQKVEETLLQPTFVTGHPVEVSPLA-KKNETDPR 400

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
              +++L     E A+     +      + F    + KE               A + GM
Sbjct: 401 FTDRFELFIVRREHANAFTELNDPIDQRERFEAQLLEKEAGNDEAHELDNDFLEALEYGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++
Sbjct: 461 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPTMRH 494


>gi|304396711|ref|ZP_07378591.1| lysyl-tRNA synthetase [Pantoea sp. aB]
 gi|304355507|gb|EFM19874.1| lysyl-tRNA synthetase [Pantoea sp. aB]
          Length = 506

 Score =  213 bits (541), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 76/360 (21%), Positives = 142/360 (39%), Gaps = 35/360 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +  Y   S  +L   D+   V ++G +   R  G   F+ ++D  G  Q+  + D     
Sbjct: 50  LESYGEKSNEELEALDI--EVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEG 107

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I      +W L   G ++    +       TG++ +   ++ +L+ A   PLP       
Sbjct: 108 IYNEQFKKWDL---GDILGARGKLFRTK--TGELSIHCSELRLLTKALR-PLPDKFHGLA 161

Query: 121 PESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGAR 178
            +  R++ R+LDL  +   +N    R++I+  +R  M+  +F+E  TP++        AR
Sbjct: 162 DQETRYRQRYLDLIANEESRNTFKIRSQIMAGIRQFMVGRDFMEVETPMMQVIPGGASAR 221

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++
Sbjct: 222 PFITHHNALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGI-SPRHNPEFTMME 279

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           + M++ +  D++   E++ R + ++                   +  YG  + D   P  
Sbjct: 280 LYMAYADYKDLIELTESLFRTLAQDVLGST--------------VVPYGEQEFDFGKPFE 325

Query: 299 MHNVTEHFVHS-------EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
              + E            +   F K +++     +     K  G  R   +   E A + 
Sbjct: 326 KLTMREAIKKYRPETDLADLEDFDKAVAIAQSLHIK--VEKSWGLGRVVTEIFEETAEAH 383



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 66/196 (33%), Gaps = 14/196 (7%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
                    +R  +     ++      D  K  + A      + +  G+          +
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDLADLEDFDKAVAIAQSLHIKVEKSWGLGRV-------V 372

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
            +   +E   E   +         P       + ND       +++    G EI +G   
Sbjct: 373 TE--IFEETAEA-HLIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSE 429

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
            + +E   + F     +K+  ++           A + G+PP  G+  GIDR+VML   +
Sbjct: 430 LNDAEDQAERFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNS 489

Query: 554 KNVREVSLFPMSQNFC 569
             +R+V LFP  +   
Sbjct: 490 HTIRDVILFPALRPGS 505


>gi|261403949|ref|YP_003240190.1| lysyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261280412|gb|ACX62383.1| lysyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 503

 Score =  213 bits (541), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 139/359 (38%), Gaps = 35/359 (9%)

Query: 5   RTHSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H  GD+                  V L+G +   R  G   F  I+D  G  Q+    
Sbjct: 42  REHHAGDILKQYDELSKEELEEKQVEVNLAGRIMAKRGMGKASFAHIQDLSGRIQIYVRQ 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS      ++     +  I G+      + +     TG+  +  +++E+LS +   PLP 
Sbjct: 102 DSVAEAQYEAFSILDLGDIIGV------KGVLFKTKTGETTVKVKELEVLSKSL-YPLPE 154

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                    +R++ R++DL     + K  + R+RII SMR  + ++ ++E  TP L + +
Sbjct: 155 KFHGLKDVELRYRQRYVDLIINPDVQKTFITRSRIIQSMRRYLDSQGYLEVETPTLHSIA 214

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   +R+E   +   P 
Sbjct: 215 GGAAARPFITHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVYRNEGISTRHNP- 272

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  DI+   EN++  + +E      +S     +      RR       
Sbjct: 273 EFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTQVISYQGHEVDLTPQWRR------- 325

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
               + M +  +  V  +   FS  +S    + +          +  F   +N +    
Sbjct: 326 ----VSMVDAVKEVVGVD---FSVDMSNEEAHRLAKEHKVPVEPHMTFGHILNAFFEQF 377



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 5/130 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  I          +    + K ND+      +++L     E A+     +  
Sbjct: 373 FFEQFVEETLIQPTFVTGHPVEISPLA-KKNDVDPRFTDRFELFIVAREHANAFSELNDP 431

Query: 502 EVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               Q F      KE              RA + GMPP GG+  GIDR++MLL  + ++R
Sbjct: 432 IDQRQRFEAQMKEKEQGNDEAHEMDEDFLRALEYGMPPTGGLGIGIDRLIMLLTNSPSIR 491

Query: 558 EVSLFPMSQN 567
           +V LFP  +N
Sbjct: 492 DVLLFPHMRN 501


>gi|307276457|ref|ZP_07557580.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306506937|gb|EFM76084.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2134]
          Length = 498

 Score =  213 bits (541), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 132/354 (37%), Gaps = 28/354 (7%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            S++ + V ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSAELHEQYDNHTKEELSEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G     + + +  N  TG++ + AQ I +L+ A   PLP 
Sbjct: 100 DQVGDEAYELFKHADL----GDFFGVTGQIMKTN--TGEVTVKAQTITLLTKALR-PLPD 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +       +KR++II+ +R  +    ++E  TP+L   +
Sbjct: 153 KYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETPVLHNEA 212

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 213 GGAAARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP- 270

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ +  D+++  E ++R   E+             I YD      G+    
Sbjct: 271 EFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTD-------ITYDGQAVDLGSPFKR 323

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           L     +   T      E  +                    G     F +   E
Sbjct: 324 LHMVDAVKEQTGVDFWQEMTIEEACALAKEHNVEITDAMTVGHIINEFFETFVE 377



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +      +  P       K N        +++L   G E A+     +      + F
Sbjct: 377 EDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRERF 436

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +E   +           A + G+PP GG+  GIDR+VMLL  A+++R+V LFP 
Sbjct: 437 EEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPT 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|153853504|ref|ZP_01994884.1| hypothetical protein DORLON_00873 [Dorea longicatena DSM 13814]
 gi|149753659|gb|EDM63590.1| hypothetical protein DORLON_00873 [Dorea longicatena DSM 13814]
          Length = 610

 Score =  213 bits (541), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 71/327 (21%), Positives = 131/327 (40%), Gaps = 15/327 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +I+D  G  QV    D+   E     +   +  I GL    
Sbjct: 28  VAIAGRMMFKRVMGKASFCNIQDLQGSIQVYVARDAIGTESYADFKRSDIGDIFGL---- 83

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E       TG+I + A+K+ +LS + ++ LP           R++ R++DL  +   K
Sbjct: 84  --EGFAFRTRTGEISIHAEKMTLLSKSLQI-LPEKFHGLTDTDTRYRQRYVDLIMNPESK 140

Query: 141 -NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
              +KR++I+  +R  +    F+E  TP+L +++   A                L  + +
Sbjct: 141 ETFIKRSKILKEIRNFLDGRGFMEVETPMLVSNAGGAAARPFETHYNALNEDVKLRISLE 200

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++   E++ R 
Sbjct: 201 LYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYEGMMELTESMFRY 259

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           + E+      +S N   I  D A         D        + +E     E    +K L+
Sbjct: 260 LAEKVCGSAVISYNGTVI--DMAKPFERISMIDAVKKYAGVDFSEVKTDEE----AKALA 313

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                E      KG   N  F +   E
Sbjct: 314 DKHHVEYEERHKKGDILNLFFDEFCEE 340



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 73/226 (32%), Gaps = 39/226 (17%)

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-- 415
           Y+  ++  S  ++  G V          ++   +    G    F      +     AD  
Sbjct: 259 YLAEKVCGSAVISYNGTVIDMAKPFERISMIDAVKKYAG--VDFSEVKTDEEAKALADKH 316

Query: 416 -----ARNHIAQELGII-----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
                 R+     L +           +  ++ D P               +P T     
Sbjct: 317 HVEYEERHKKGDILNLFFDEFCEEKMIQPTFVTDHP------------IEISPLTKKNPE 364

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG- 524
             +            +++L   G E+ +     +      + F+    +    +      
Sbjct: 365 DPNY---------VERFELYVYGREMCNAYSELNDPIDQRERFAAQEEAFAAGDEEANHT 415

Query: 525 ---LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                 A + GMPP GGI  GIDR+VMLL  A+ +R+V LFP  ++
Sbjct: 416 DEDFLNALEIGMPPTGGIGYGIDRLVMLLTDAQAIRDVLLFPTMKS 461


>gi|323971673|gb|EGB66902.1| lysyl-tRNA synthetase [Escherichia coli TA007]
          Length = 505

 Score =  213 bits (541), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 138/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKMEVT--------------YGDVTLD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 21/202 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +    P  K       +  R   DM D D+      D  K  + +       +  LG I 
Sbjct: 318 LDFGKPFEKLTMREAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIV 372

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE               E  +         P       + ND+      +++    G
Sbjct: 373 TEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 420

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  GID
Sbjct: 421 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VML   +  +R+V LFP  +
Sbjct: 481 RMVMLFTNSHTIRDVILFPAMR 502


>gi|188534902|ref|YP_001908699.1| lysyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238689741|sp|B2VF45|SYK_ERWT9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|188029944|emb|CAO97828.1| Lysyl tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 506

 Score =  213 bits (541), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 74/345 (21%), Positives = 137/345 (39%), Gaps = 29/345 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L  
Sbjct: 61  LEALGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 RRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N    R++I+  +R  M+  +F+E  TP++ A      AR F+          
Sbjct: 175 IANDDSRNTFKIRSQIMAGIRSFMVDRDFMEVETPMMQAIPGGASARPFITHHNALDLDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E++ R + ++                   +  YG  + D   P     + E  +    
Sbjct: 293 LTESLFRTLAQDVLGST--------------VVPYGDQQFDFGKPFEKLTMKEAILKYRP 338

Query: 312 RVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEWARSQ 351
           +     L+        A        K  G  R   +   E A + 
Sbjct: 339 QTDLADLADFDKSVAIAQSLGIKVEKSWGLGRLVTEIFEETAEAH 383



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/339 (14%), Positives = 102/339 (30%), Gaps = 30/339 (8%)

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR--RYGTDKPDLR 294
           +    SF+   D +     +++ +          ++    I + +A+    Y    P+L 
Sbjct: 191 MAGIRSFMVDRDFMEVETPMMQAI-------PGGASARPFITHHNALDLDMYLRIAPELY 243

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354
              ++    +          ++ +S     E   +       +      + E        
Sbjct: 244 LKRLVVGGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQ 303

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
            +                 P  K          R + D+   D   F   D     + + 
Sbjct: 304 DVLGSTVVPYGDQQFDFGKPFEKLTMKEAILKYRPQTDL--ADLADF---DKSVAIAQSL 358

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +   +  LG +    FE               E  +         P       + ND+
Sbjct: 359 GIKVEKSWGLGRLVTEIFE------------ETAEAHLIQPTFITEYPAEVSPLARRNDM 406

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQ 530
                 +++    G EI +G    + ++   + F     +K+  ++           A +
Sbjct: 407 DPEITDRFEFFIGGREIGNGFSELNDAQDQAERFLQQVNAKDAGDDEAMFYDEDYVTALE 466

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G+PP  G+  GIDR+VML   +  +R+V LFP  +   
Sbjct: 467 HGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPALRPGS 505


>gi|330828581|ref|YP_004391533.1| Lysyl-tRNA synthetase, heat inducible [Aeromonas veronii B565]
 gi|328803717|gb|AEB48916.1| Lysyl-tRNA synthetase, heat inducible [Aeromonas veronii B565]
          Length = 511

 Score =  213 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 66/302 (21%), Positives = 123/302 (40%), Gaps = 26/302 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           +   S  +L    +G  V+++G +   R  G   F  ++D  G  QV    D        
Sbjct: 54  FDDKSAEELTS--LGKRVKIAGRIMTRRIMGKASFATLQDMAGKIQVYVTRDDLPEGFYN 111

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++            TG++ +    I +L+ A   PLP   +    + 
Sbjct: 112 EQFKKWDL---GDIVGVEGTLF--KTQTGELSVHVSDIRLLTKALR-PLPEKHKGLTDQE 165

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R + R+LDL   +   K  + RT+++  +R     + F+E  TP++        AR F+
Sbjct: 166 ARCRQRYLDLIANEESRKTFMIRTQVVAGIRKFFNEKRFMEVETPMMQVIPGGASARPFV 225

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R ++I   FR+E   S R   EF  ++  M
Sbjct: 226 THHNALDIDMY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGI-SVRHNPEFTMIEFYM 283

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN--------------NFLRICYDDAIRRYG 287
           ++ +  D+++  E +LR + ++      +                 F R+   ++I ++ 
Sbjct: 284 AYADYIDLMDLTEELLRTLAQDILGDTKIRYAKEGEEGLTIDFGQPFQRLTMVESILKFN 343

Query: 288 TD 289
            D
Sbjct: 344 PD 345



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 77/239 (32%), Gaps = 39/239 (16%)

Query: 340 FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC 399
             D   E  R+  Q  L     R  + G         +    +      ++ +    D  
Sbjct: 291 LMDLTEELLRTLAQDILGDTKIRYAKEGEEGLTIDFGQPFQRLTMVESILKFNP---DVT 347

Query: 400 FFIAGDPLKFCSFAADARNHI--AQELGIINCNCFE---------FCWIMDFPFYEWNEE 448
                      + A      +    ELG +    FE           +I ++P       
Sbjct: 348 LDDLATLESAKAVAKRLHIELMKGWELGHVITAIFEETVEHMLLQPTFITEYP------- 400

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
                 A +P             ND+      +++    G E+A+G    + +E   + F
Sbjct: 401 -----AAVSPLARR---------NDVNPDVTDRFEFFIGGRELANGFSELNDAEDQAKRF 446

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +    KE  ++           A + G+PP  G   GIDR+VML   +  +R+V LFP
Sbjct: 447 QDQVDQKEAGDDEAMFYDADFVTALEHGLPPTAGQGIGIDRLVMLFTNSHTIRDVILFP 505


>gi|283955126|ref|ZP_06372628.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793339|gb|EFC32106.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 469

 Score =  213 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 103/566 (18%), Positives = 199/566 (35%), Gaps = 122/566 (21%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           ++    +   D G    ++G +  +R  G  IF +I D     Q+  + DS   E+   +
Sbjct: 11  SYILEQVEKRDEGVNAVVAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSIGEELYAIL 70

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           +    L +  +V+    +       TG+  L A ++++ + A  +PLP           R
Sbjct: 71  KKN--LEVGDIVL---VKGFPFVTKTGEFSLHASEVKLATKA-IIPLPEKYHGLIDIEQR 124

Query: 126 FKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           ++ R++D+  +  + K+ + R+++++ +R     + F+E  TP++   +        V  
Sbjct: 125 YRKRYVDMIMNAEVRKDFLVRSKVVSLIRHFFEDKGFLEVETPMMHPIAGGANAKPFVTF 184

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             + G    L  AP+ Y + L+  GF+  F+I  CFR+E                     
Sbjct: 185 HNSLGVERFLRIAPELYLKRLVVGGFEAVFEINRCFRNEG-------------------- 224

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                ++   N                  F  I +  A   Y            + ++TE
Sbjct: 225 -----MDLTHN----------------PEFTTIEFYWAYHNYKD----------LMDLTE 253

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                        L ++      AI   G         +M ++++          F R+ 
Sbjct: 254 ELF---------ALLLDKLNLGKAIEFDG---------KMIDFSKP---------FERIT 286

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
               +   G + K L I + E +  +L         F A + L+        +  +    
Sbjct: 287 YKDALCKYGGLDKDL-IEDKEKVLAKLKAD-----GFKANEKLE----LGHLQAELFD-- 334

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
             +        +++DFP             + +P +        +         A +++L
Sbjct: 335 NYVEKKLINPTFVIDFP------------ISISPLSRRSDEDSQI---------AERFEL 373

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIA 540
              G E+A+G    +      + F     +K   +            A   GMPP  G  
Sbjct: 374 FICGRELANGFNELNDPLDQYERFLKQIEAKNAGDEEACEMDEDFINALGYGMPPTAGEG 433

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL   K++R+V LFP  +
Sbjct: 434 IGIDRLVMLLTNKKSIRDVILFPAMR 459


>gi|163815695|ref|ZP_02207067.1| hypothetical protein COPEUT_01876 [Coprococcus eutactus ATCC 27759]
 gi|158449000|gb|EDP25995.1| hypothetical protein COPEUT_01876 [Coprococcus eutactus ATCC 27759]
          Length = 685

 Score =  213 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 66/319 (20%), Positives = 132/319 (41%), Gaps = 19/319 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +I+D  G  QV    D    E     +   +  I G+    
Sbjct: 99  VSIAGRMMFKRVMGKASFCNIQDLKGNIQVYVARDQIGEESYADFKKSDIGDIYGV---- 154

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +        G+I + A++I +LS + ++ LP          +R++ R++DL  +   K
Sbjct: 155 --KGYAFRTKMGEISIHAEEITLLSKSLQM-LPEKFHGLTDTDMRYRQRYVDLIMNQDSK 211

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
              +KR++I+  +R  +   +F+E  TP+L +++   A                L  + +
Sbjct: 212 EVFIKRSQILKEIRNFLAGRDFMEVETPMLVSNAGGAAARPFETHYNALDEDVKLRISLE 271

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   ++   E++ R 
Sbjct: 272 LYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYYGMMELTESMFRY 330

Query: 260 VFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKPDLRNPIIMHNVTEHFVHS 309
           + E+      +S N         F R+   DAI++Y G D   + +      + +     
Sbjct: 331 LAEKVCGSTKISYNGIEIDFGKPFERLTMVDAIKKYTGVDFDQVADDAEAKKIADEHHVE 390

Query: 310 EFRVFSKILSVNPGYEVWA 328
                 K   VN  +E + 
Sbjct: 391 YEERHKKGDIVNLFFEEFC 409



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 74/182 (40%), Gaps = 25/182 (13%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES----LKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           F+E   EE  I      F M      S     K +D   +   +++L  N +E+ +    
Sbjct: 404 FFEEFCEENLIQPT---FIMDHPIEISPLTKKKPSDPTKV--ERFELFINTWEMCNAYSE 458

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
            +      + F+    +    ++           A + GMPP GGI  GIDR+VMLL  +
Sbjct: 459 LNDPIDQRERFAAQDANAAAGDDEAEHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTDS 518

Query: 554 KNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISVTTILRNVYGL 613
           + +R+V LFP  ++           V+ +   ++     E P+K +K     I  +   +
Sbjct: 519 QAIRDVLLFPTMKSL--------DGVNKK--NDVNNTASEAPEKNVKTESEKI--DFSNV 566

Query: 614 KI 615
           KI
Sbjct: 567 KI 568


>gi|150392206|ref|YP_001322255.1| lysyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149952068|gb|ABR50596.1| lysyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 499

 Score =  213 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 70/321 (21%), Positives = 131/321 (40%), Gaps = 16/321 (4%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH    +     +  G  V ++G +   R HG   F++I+D  G  QV    D    +  
Sbjct: 37  THYSEQIQEDFEALEGQKVTIAGRMMAKRGHGKASFINIQDKDGRIQVYVREDKIGEKAY 96

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +     +V    G ++    E    N   G++ + A ++++L+ + +  LP        +
Sbjct: 97  EL----FVTYDRGDILEIQGEIFKTN--KGEVSVKALEVKLLTKSLQ-VLPEKWHGLKDQ 149

Query: 123 SIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
            +R++ R++DL     + K  + R+R I S+R  +    +IE  TPIL T +    A+ F
Sbjct: 150 DLRYRQRYVDLIVNPEVKKTFMVRSRAIKSIRSFLDDRGYIEVETPILDTIAGGASAKPF 209

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                      Y L  A + + + L+  G DR ++I   FR+E       P EF  +++ 
Sbjct: 210 TTHHNTLGIDMY-LRIATELHLKRLIVGGLDRVYEIGRLFRNEGMSIKHNP-EFTTIELY 267

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ +  D+++  EN++  V E       ++     I      RR      D        
Sbjct: 268 EAYADYKDMMDITENIVAHVAENALGTTKITYQGTEIDLTPPWRR--ISMTDSCKEYADV 325

Query: 301 NVTEHFVHSEFRVFSKILSVN 321
           + +E     E    +K L + 
Sbjct: 326 DFSEIKTDEEAIELAKKLGLE 346



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 10/155 (6%)

Query: 418 NHIAQELGIINCNCFEFCWIMD--FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
             +A++LG+      +   +++  F  +     EK +         P       K N   
Sbjct: 337 IELAKKLGLEVRPGMKKGHVINEVFETFV----EKHLMQPTFITHHPVEVSPLAKRNPDN 392

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++   N +EIA+     +        F    + +E  ++           A + 
Sbjct: 393 PEITNRFEAFVNTWEIANAFSELNDPIDQRARFMEQLVQREAGDDEAHMLDEDFLNALEV 452

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP GG+  GIDR++MLL  + ++R+V LFP  +
Sbjct: 453 GLPPTGGLGIGIDRLMMLLTDSPSIRDVLLFPTMK 487


>gi|329925492|ref|ZP_08280366.1| lysine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328939775|gb|EGG36115.1| lysine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 505

 Score =  213 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 139/359 (38%), Gaps = 35/359 (9%)

Query: 5   RTHSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H  GD+                  V L+G +   R  G   F  I+D  G  Q+    
Sbjct: 44  REHHAGDILKQYDELSKEELEEKQVEVNLAGRIMAKRGMGKASFAHIQDLSGRIQIYVRQ 103

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS      ++     +  I G+      + +     TG+  +  +++E+LS +   PLP 
Sbjct: 104 DSVAEAQYEAFSILDLGDIIGV------KGVLFKTKTGETTVKVKELEVLSKSL-YPLPE 156

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                    +R++ R++DL     + K  + R+RII SMR  + ++ ++E  TP L + +
Sbjct: 157 KFHGLKDVELRYRQRYVDLIINPDVQKTFITRSRIIQSMRRYLDSQGYLEVETPTLHSIA 216

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   +R+E   +   P 
Sbjct: 217 GGAAARPFITHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVYRNEGISTRHNP- 274

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  DI+   EN++  + +E      +S     +      RR       
Sbjct: 275 EFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTQVISYQGHEVDLTPQWRR------- 327

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
               + M +  +  V  +   FS  +S    + +          +  F   +N +    
Sbjct: 328 ----VSMVDAVKEVVGVD---FSVDMSNEEAHRLAKEHKVPVEPHMTFGHILNAFFEQF 379



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 5/130 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  I          +    + K ND+      +++L     E A+     +  
Sbjct: 375 FFEQFVEETLIQPTFVTGHPVEISPLA-KKNDVDPRFTDRFELFIVAREHANAFSELNDP 433

Query: 502 EVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               Q F      KE              RA + GMPP GG+  GIDR++MLL  + ++R
Sbjct: 434 IDQRQRFEAQMKEKEQGNDEAHEMDEDFLRALEYGMPPTGGLGIGIDRLIMLLTNSPSIR 493

Query: 558 EVSLFPMSQN 567
           +V LFP  +N
Sbjct: 494 DVLLFPHMRN 503


>gi|282882559|ref|ZP_06291180.1| lysine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297701|gb|EFA90176.1| lysine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 637

 Score =  213 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 75/337 (22%), Positives = 141/337 (41%), Gaps = 27/337 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVL 71
               G  V ++G V   R HG I FLD++D+ G  QV A  D     +E  K +    ++
Sbjct: 50  EEFDGKDVCIAGRVMSKRRHGKICFLDLQDYKGRIQVFARKDVLLENYEDVKGLDMGDII 109

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G V    A         G++ ++A+K+++LS + ++ LP          +R++ R++
Sbjct: 110 GVKGKVFKTEA---------GEVTVNAEKLDLLSKSLQI-LPEKFHGLKDPDLRYRQRYV 159

Query: 132 DLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQG 189
           DL  +   K +  KRT+II ++R  +  + FIE  TPIL T +    AR FL        
Sbjct: 160 DLIVNPEIKEVFLKRTKIIKAIRQYLDEKGFIEVETPILGTVAGGANARPFLTHHNTLDI 219

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  A + + + L+  GFD+ +++   FR+E   +   P EF  +++  ++V+ D++
Sbjct: 220 DM-QLRIANELFLKRLIVGGFDKVYEMGKMFRNEGMDTRHNP-EFTNIELYQAYVDMDEM 277

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           +   EN+     ++    + ++     I      RR           + M    + +   
Sbjct: 278 MAITENIFEYAAQKVLGTDKITYQGTEISLKAPWRR-----------MSMIEAVKEYAGV 326

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           +F             +   +  + G           E
Sbjct: 327 DFDKVETDEQAQQLAKEKGVEVEEGSSWGKILSEFFE 363



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 7/130 (5%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL-LSIKAFQYDLVCNGFEIASGGIRNHM 500
           F+E   EEK +       T     +  L   D        +++   N +E A+     + 
Sbjct: 361 FFETFCEEKLVQPTF--ITGHPVDISPLAKKDPKDKRLTRRFEAFINTWEFANAFSELND 418

Query: 501 SEVMLQAFS----NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                + F           E           A + G+PP GG+  G+DR++MLL    ++
Sbjct: 419 PIDQRERFEAQVREHEKGDEEAHPMDSDFINAIEVGLPPTGGLGIGVDRMIMLLTDQPSI 478

Query: 557 REVSLFPMSQ 566
           R++ LFP  +
Sbjct: 479 RDIILFPTMK 488


>gi|70727492|ref|YP_254408.1| lysyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|123762274|sp|Q4L3H5|SYK_STAHJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|68448218|dbj|BAE05802.1| Lysyl-tRNA synthetase class II [Staphylococcus haemolyticus
           JCSC1435]
          Length = 496

 Score =  213 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 70/373 (18%), Positives = 142/373 (38%), Gaps = 25/373 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   +  S V ++G +   R  G   F  ++D  G  Q+    D    E      + W 
Sbjct: 51  ELHDKEDESHVSIAGRLMTKRGKGKAGFAHVQDLTGQIQIYVRKDQIGEE---DFDNLWK 107

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               G ++    E +     TG++ + A+   +LS A   PLP           R++ R+
Sbjct: 108 GADLGDIVGI--EGVMFKTNTGELSVKAKTFTLLSKALR-PLPDKFHGLQDIEQRYRQRY 164

Query: 131 LDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDL  +         R++II  MR  +  + F+E  TP++   +   A    V       
Sbjct: 165 LDLITNQDSTQTFINRSKIIQEMRNYLNKQGFLEVETPMMHQIAGGAAARPFVTHHNALD 224

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI
Sbjct: 225 ATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYHDI 283

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++  E+++R + +E                  A  +Y  ++ DL +     ++ +    +
Sbjct: 284 MDLTESMVRHIAQEVFG--------------SAKVQYNEEEIDLESAWTRLHIVDAVKEA 329

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
               F +I S                 N  +   +NE+   + +  L    +     G+ 
Sbjct: 330 TGVDFYQIKSDEEAIAAAKEHGIEITNNMKYGHILNEFFEQKVEETLIQPTFIY---GHP 386

Query: 370 AGMGPVAKHLNIV 382
             + P+AK     
Sbjct: 387 IEISPLAKKNPED 399



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 17/207 (8%)

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD---PLKFCSFAADARNHIAQELGI 426
              G      N    +       +   D+     G     +K    A  A    A+E GI
Sbjct: 297 EVFGSAKVQYNEEEIDLESAWTRLHIVDAVKEATGVDFYQIKSDEEAIAA----AKEHGI 352

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDL 484
              N  ++  I++  F+E   EE  I      F       +  L   +    +   +++L
Sbjct: 353 EITNNMKYGHILN-EFFEQKVEETLIQPT---FIYGHPIEISPLAKKNPEDPRFTDRFEL 408

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMPPHGGIA 540
              G E A+     +      + F    + K    +           A + GMPP GG+ 
Sbjct: 409 FIVGREHANAFTELNDPIDQRERFEAQLVEKAQGNDEAHEMDEDYIEALEYGMPPTGGLG 468

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 469 IGIDRLVMLLTDSPSIRDVLLFPYMRQ 495


>gi|256618322|ref|ZP_05475168.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256597849|gb|EEU17025.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
          Length = 484

 Score =  213 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 132/354 (37%), Gaps = 28/354 (7%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            S++ + V ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSAELHEQYDNHTKEELSEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G     + + +  N  TG++ + AQ I +L+ A   PLP 
Sbjct: 100 DQVGDEAYELFKHADL----GDFFGVTGQIMKTN--TGEVTVKAQTITLLTKALR-PLPD 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +       +KR++II+ +R  +    ++E  TP+L   +
Sbjct: 153 KYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETPVLHNEA 212

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 213 GGAAARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP- 270

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ +  D+++  E ++R   E+             I YD      G+    
Sbjct: 271 EFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTD-------ITYDGQAVDLGSPFKR 323

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           L     +   T      E  +                    G     F +   E
Sbjct: 324 LHMVDAVKEQTGVDFWQEMTIEEACALAKEHNVEITDAMTVGHIINEFFETFVE 377



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 38/108 (35%), Gaps = 4/108 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +      +  P       K N        +++L   G E A+     +      + F
Sbjct: 377 EDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRERF 436

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
                 +E   +           A + G+PP GG+  GIDR+VMLL  
Sbjct: 437 EEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVMLLTD 484


>gi|67920132|ref|ZP_00513652.1| Lysyl-tRNA synthetase, class-2 [Crocosphaera watsonii WH 8501]
 gi|67857616|gb|EAM52855.1| Lysyl-tRNA synthetase, class-2 [Crocosphaera watsonii WH 8501]
          Length = 573

 Score =  213 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 60/331 (18%), Positives = 130/331 (39%), Gaps = 21/331 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAK 63
                    +V   V ++G +   R  G + F  ++D  G  Q+  +         E+  
Sbjct: 54  KYASLKNGEEVEVDVAIAGRIIARRVFGKLAFFSLQDESGTIQLYLDKKEIQAHMSELES 113

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +      L   G ++             G++ +  ++ EIL+ +  LPLP          
Sbjct: 114 AFNHLKKLTDTGDIIGVKGSIKRTE--KGELSVKVKEYEILTKSL-LPLPDKWHGLTDTE 170

Query: 124 IRFKYRFLDLRRDTLHKNIVKRT-RIINSMRCRMIAENFIECSTPILTASSPEG-ARDFL 181
            R++ R++DL  +   +   +R  +I  S+R  +  + FIE  TP+L + +    AR F+
Sbjct: 171 KRYRQRYVDLIVNPQVRQTFRRRAQITASIRRYLDNQGFIEIETPVLQSEAGGAEARPFI 230

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 +   Y L  A + + + L+  GF++ F++   FR+E   +   P EF  +++  
Sbjct: 231 TYHNTLEMDLY-LRIATELHLKRLIVGGFEKVFEMGRIFRNEGVSTKHNP-EFTSIELYQ 288

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ + +D++   E ++    EE      ++    +I      RR           + M++
Sbjct: 289 AYADYNDMMELTEAIITTAAEEVLGTLNITYQGEQIDLSTPWRR-----------VTMND 337

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
           + +     +F  F+   +     +   +   
Sbjct: 338 IVKEKSGLDFEAFTDFETAKTEVKKAGLEVP 368


>gi|160881676|ref|YP_001560644.1| lysyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160430342|gb|ABX43905.1| lysyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 503

 Score =  213 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 72/325 (22%), Positives = 132/325 (40%), Gaps = 22/325 (6%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   D+     +  G  V ++G +   R  G   F++I+D  G  Q     DS   E  
Sbjct: 49  THHTIDVKDNFENLEGQIVAIAGRIMTKRVMGKASFINIQDKLGNIQSYIQRDSIGEEEY 108

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              +   +  I G+      +        G+I + A +I +LS   +  LP         
Sbjct: 109 AGFKKFDIGDIVGI------KGEVFKTHAGEISVRANEILLLSKCLQ-VLPEKFHGLTDT 161

Query: 123 SIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             R++ R++DL  +   K   +KR+ II  +R  +  E+FIE  TP+L  ++   A    
Sbjct: 162 DTRYRQRYVDLMMNPEVKETFIKRSAIIREIRNYLDGEDFIEVETPVLVKNAGGAAARPF 221

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           +    +      L  + + Y + L+  G +R ++I   FR+E   S R   EF  L++  
Sbjct: 222 MTHHNSLDEDLNLRISLELYLKRLIVGGLERVYEIGRVFRNEGL-SVRHNPEFTLLELYQ 280

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY-GTDKP 291
           ++ + + +++  E + R V E+      +S           F RI   +A+++Y G D  
Sbjct: 281 AYTDYNGMMDLTEKLFRTVAEKVIGTTKISYEGVEIDLGKPFERITMVEAVKKYKGIDFD 340

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSK 316
            ++       + +    S      K
Sbjct: 341 QVKTEEEAKALAKEHHVSFEDRHKK 365



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 56/160 (35%), Gaps = 30/160 (18%)

Query: 417 RNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           R+     L +     +  +  +  +++D P               +P T  +        
Sbjct: 362 RHKKGDILSLFFEEFVEEHLIQPTFVIDHP------------VEISPLTKKKPENPEY-- 407

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYR 527
                    +++L     E+A+     +      + F      K   +            
Sbjct: 408 -------TERFELFVTKREMANAYSELNDPIDQRERFVAQEALKAAGDEEANSMDEDFLN 460

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A   GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++
Sbjct: 461 ALAYGMPPTGGIGIGIDRLVMLLTDSSAIRDVLLFPTMKS 500


>gi|239825660|ref|YP_002948284.1| lysyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239805953|gb|ACS23018.1| lysyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 494

 Score =  213 bits (541), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 78/390 (20%), Positives = 147/390 (37%), Gaps = 38/390 (9%)

Query: 5   RTHSC-------GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH         GDL   ++      V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 34  RTHKAKELFDLYGDLSKEELEEKQIKVAVAGRIMTKRGKGKAGFAHIQDVTGQIQIYVRE 93

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  ++  +  I G+               G++ +     E L+ A   PLP 
Sbjct: 94  DTVGEEQYELFKTSDLGDIIGVY------GTVFKTKVGELSIKVSSYEFLTKALR-PLPE 146

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +   KN  + R+RII +MR  + +  ++E  TP++ + +
Sbjct: 147 KYHGLKDIEQRYRQRYLDLIMNPESKNTFITRSRIIQAMRRYLDSHGYLEVETPMMHSIA 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 207 GGAAARPFITHHNALDMPLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP- 264

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L++  ++ +  DI+   EN++  + +E      +               YG    D
Sbjct: 265 EFTMLELYEAYADFRDIMKLTENLIAHIAQEVLGTTKIQ--------------YGEHTVD 310

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
           L       ++ +         F K +S     E+          +  F   +NE+   + 
Sbjct: 311 LTPEWKRLHMVDAIKEYVGVDFWKQMSDEEARELAKEHGVEIAPHMTFGHIVNEFFEQKV 370

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
           +  L    +     G+   + P+AK     
Sbjct: 371 EDKLIQPTFIY---GHPVEISPLAKKNPDD 397



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 6/154 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E G+       F  I++  F+E   E+K I          +    + K  D    
Sbjct: 342 RELAKEHGVEIAPHMTFGHIVN-EFFEQKVEDKLIQPTFIYGHPVEISPLAKKNPD-DPR 399

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
              +++L   G E A+     +      + F      +E               A + GM
Sbjct: 400 FTDRFELFIVGREHANAFTELNDPIDQRERFEAQLKEREQGNDEAHEMDEDFIEALEYGM 459

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  G+DR+VMLL  + ++R+V LFP  +N
Sbjct: 460 PPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMRN 493


>gi|300861816|ref|ZP_07107896.1| lysine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|300848341|gb|EFK76098.1| lysine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|315145398|gb|EFT89414.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2141]
          Length = 498

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 132/354 (37%), Gaps = 28/354 (7%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            S++ + V ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSAELHEQYDNHTKEELSEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G     + + +  N  TG++ + AQ I +L+ A   PLP 
Sbjct: 100 DQVGDEAYELFKHADL----GDFFGVTGQIMKTN--TGEVTVKAQTITLLTKALR-PLPD 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +       +KR++II+ +R  +    ++E  TP+L   +
Sbjct: 153 KYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETPVLHNEA 212

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 213 GGAAARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP- 270

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ +  D+++  E ++R   E+             I YD      G+    
Sbjct: 271 EFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTD-------ITYDGQAVDLGSPFKR 323

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           L     +   T      E  +                    G     F +   E
Sbjct: 324 LHMADAVKEQTGVDFWQEMTIEEARALAKEHNVEITDAMTVGHIINEFFETFVE 377



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +      +  P       K N        +++L   G E A+     +      + F
Sbjct: 377 EDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRERF 436

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +E   +           A + G+PP GG+  GIDR+VMLL  A+++R+V LFP 
Sbjct: 437 EEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPT 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|307286953|ref|ZP_07567028.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306501899|gb|EFM71188.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0109]
          Length = 498

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 132/354 (37%), Gaps = 28/354 (7%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            S++ + V ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSAELHEQYDNHTKEELSEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G     + + +  N  TG++ + AQ I +L+ A   PLP 
Sbjct: 100 DQVGDEAYELFKHADL----GDFFGVTGQVMKTN--TGEVTVKAQTITLLTKALR-PLPD 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +       +KR++II+ +R  +    ++E  TP+L   +
Sbjct: 153 KYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETPVLHNEA 212

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 213 GGAAARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP- 270

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ +  D+++  E ++R   E+             I YD      G+    
Sbjct: 271 EFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTD-------ITYDGQAVDLGSPFKR 323

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           L     +   T      E  +                    G     F +   E
Sbjct: 324 LHMVDAVKEQTGVDFWQEMTIEEARALAKEHNVEITDAMTVGHIINEFFETFVE 377



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +      +  P       K N        +++L   G E A+     +        F
Sbjct: 377 EDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRDRF 436

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +E   +           A + G+PP GG+  GIDR+VMLL  A+++R+V LFP 
Sbjct: 437 EEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPT 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|309785303|ref|ZP_07679934.1| lysyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308926423|gb|EFP71899.1| lysyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 505

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 137/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHTEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +       V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQNILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRSETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 53/298 (17%), Positives = 94/298 (31%), Gaps = 23/298 (7%)

Query: 275 LRICYDDAIR--RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
             I + +A+    Y    P+L    ++    E          ++ +SV    E   +   
Sbjct: 222 PFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELY 281

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
               +      + E         +            +    P  K       +  R   D
Sbjct: 282 MAYADYKDLIELTESLFRTLAQNILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRSETD 341

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
           M D D+      D  K  + +       +  LG I    FE               E  +
Sbjct: 342 MADLDNF-----DSAKAIAESIGIHVEKSWGLGRIVTEIFEEV------------AEAHL 384

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
                    P       + ND+      +++    G EI +G    + +E   Q F +  
Sbjct: 385 IQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQV 444

Query: 513 ISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +K+  ++           A + G+PP  G+  GIDR+VML   +  +R+V LFP  +
Sbjct: 445 AAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMR 502


>gi|317126822|ref|YP_004093104.1| lysyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315471770|gb|ADU28373.1| lysyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 499

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 72/392 (18%), Positives = 143/392 (36%), Gaps = 38/392 (9%)

Query: 5   RTHSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTHS  DL                  V L+G V   R  G   F  I+D  G  Q+    
Sbjct: 35  RTHSAQDLKELYEEESKEELEEKAIEVTLAGRVMTKRGKGKAGFAHIQDLTGQIQLYVRK 94

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    +         +    G ++  + E     +  G++ +  +  +IL+ A   PLP 
Sbjct: 95  DQVGEDQYDIFNRIDI----GDLVGVTGEVFKTKV--GELSIKVKDFQILTKALR-PLPD 147

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                     R++ R++DL     + +  + R++I+ SMR  +  + ++E  TP + A +
Sbjct: 148 KYHGLKDVEQRYRQRYVDLIVNPEVRETFILRSKILQSMRRYLDNQGYLEVETPTMHAIA 207

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+        + Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 208 GGASARPFVTHHNALDMTLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP- 265

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ + +DI+   EN++  + EE                         D   
Sbjct: 266 EFTMIELYEAYADYNDIMELTENLIAHIAEEVLG-----------TTTVNYNGVDVDLKP 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
               + M +  + +   +F             +   +P K       +   +NE+  +  
Sbjct: 315 RWKRVHMVDAIKEYTGVDFWEEMTDEEARALAKEHNVPVK---DTMKYGHVVNEFFETFV 371

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
           +  L    +     G+   + P+AK       
Sbjct: 372 EEKLVQPTFIY---GHPVDISPLAKKNADDER 400



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 6/155 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   +  ++  +++  F+E   EEK +      +  P       K N     
Sbjct: 343 RALAKEHNVPVKDTMKYGHVVN-EFFETFVEEK-LVQPTFIYGHPVDISPLAKKNADDER 400

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F    + +E  ++           A + GM
Sbjct: 401 FTDRFELFIVAREHANAFTELNDPIDQRERFEAQLVEREQGDDEAHMMDEDFVEALEYGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PP GG+  GIDR+VMLL  ++++R+V LFP  ++ 
Sbjct: 461 PPTGGLGIGIDRLVMLLTNSQSIRDVLLFPQMRHR 495


>gi|330686072|gb|EGG97694.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 495

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 66/363 (18%), Positives = 138/363 (38%), Gaps = 26/363 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q+    D    E     +   +  I G+    
Sbjct: 61  VAIAGRIMTKRGKGKAGFAHVQDLSGQIQIYVRKDQIGEEQFDLWKHADLGDIVGV---- 116

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH- 139
             E +     TG++ + A+   +L+ A   PLP           R++ R+LDL  +    
Sbjct: 117 --EGVMFKTNTGELSVKAKSFTLLTKALR-PLPDKFHGLQDIEQRYRQRYLDLITNQDST 173

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           +  + R++II  MR  +  + F+E  TP++   +   A    V       +   +  A +
Sbjct: 174 RTFINRSKIIQEMRNYLNQKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIE 233

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++  E+++R 
Sbjct: 234 LHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYHDIMDLTESMVRH 292

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           + +E      V  N   I  + + +R             + +  +     +F        
Sbjct: 293 IAQEVLGSAKVQYNGTEIDLESSWKRLH-----------IVDAVKEATGVDFYNVKSDEE 341

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
                +   I       N  +   +NE+   + +  L    +     G+   + P+AK  
Sbjct: 342 AKALAKEHGIEI---TDNMKYGHILNEFFEQKVEETLIQPTFIY---GHPIDISPLAKKN 395

Query: 380 NIV 382
              
Sbjct: 396 PED 398



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSI 477
           +A+E GI   +  ++  I++  F+E   EE  I      F        S   K N     
Sbjct: 345 LAKEHGIEITDNMKYGHILN-EFFEQKVEETLIQPT---FIYGHPIDISPLAKKNPEDPR 400

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
              +++L   G E A+     +      + F    + KE               A + GM
Sbjct: 401 FTDRFELFIVGREHANAFTELNDPIDQKERFEAQLVEKEQGNDEAHEMDEDYIEALEYGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 461 PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQ 494


>gi|327438059|dbj|BAK14424.1| lysyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 497

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 70/390 (17%), Positives = 146/390 (37%), Gaps = 38/390 (9%)

Query: 5   RTHSCGDLGVSDVG----------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   ++   +              V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 35  RTHLSNEVIAENEQFNKEQLEENPREVVIAGRIMTKRGKGKAGFAHIQDLAGQIQIYVRK 94

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +      +  I G+      +        G++ + A +   L+ A   PLP 
Sbjct: 95  DAIGEEAYELFNKADLGDIVGV------KGNVFRTQVGELSVKATEFTFLTKALR-PLPD 147

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +   K     R++II ++R  +    ++E  TP+L T +
Sbjct: 148 KFHGLTDVEQRYRQRYVDLMTNDESKTTFIQRSKIIRAIRNYLDNNGYLEVETPMLHTIA 207

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 208 GGAAARPFITHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP- 265

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ + +DI++  EN++  V ++     +               +YG D  +
Sbjct: 266 EFTMIELYEAYADYNDIMDLTENLIAHVAQDVLGTTS--------------VQYGEDTIE 311

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
           L       ++ +    +    F   ++V    ++ A               +NE+   + 
Sbjct: 312 LGVGWKRVHMVDAVKEATGVDFWAPMTVEEARKLAAEHGVEIKDAHEVGHIINEFFEQKV 371

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
           +  L    +     G+   + P+AK     
Sbjct: 372 EETLVQPTFVT---GHPVEISPLAKKNPED 398



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 8/155 (5%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A E G+   +  E   I++  F+E   EE  +       T     +  L   +    
Sbjct: 343 RKLAAEHGVEIKDAHEVGHIIN-EFFEQKVEETLVQPTF--VTGHPVEISPLAKKNPEDP 399

Query: 478 K-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCG 532
           +   +++L     E A+     +      + F      KE               A + G
Sbjct: 400 RFTDRFELFIVRREHANAFTELNDPIDQRERFEAQMAEKEAGNDEAHEMDNDFIEALEYG 459

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           MPP GG+  GIDR+VMLL  + ++R+V LFP  ++
Sbjct: 460 MPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPTMRH 494


>gi|317055780|ref|YP_004104247.1| lysyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315448049|gb|ADU21613.1| lysyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 525

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 62/333 (18%), Positives = 126/333 (37%), Gaps = 22/333 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F+D+RD  G  Q+    +    E   +          G ++ 
Sbjct: 88  RVSIAGRIMSKRMMGKASFMDLRDKSGKIQLYVRMNEVGKE---AFDRYVKKGDIGDIVG 144

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTL 138
            +       +  G+I + A+   +LS   + PLP        +  R++ R+ DL     +
Sbjct: 145 ITGFVFRTRM--GEISVHAESFTLLSKNLQ-PLPEKWHGLKDQDTRYRQRYTDLICNPEV 201

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
               +KR++II+++R  +    F+E  TP+L +++   A                L  + 
Sbjct: 202 KDTFIKRSKIISTIRRYLDERGFMEVETPMLVSNAGGAAARPFETHYNALDEDVKLRISL 261

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   +++  E++ R
Sbjct: 262 ELYLKRLIVGGLERVYEIGRVFRNEGVDARHNP-EFTLMELYQAYTDYHGMMDLTEDMFR 320

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
            + E    G T+               YG  + DL  P     + E         F++I 
Sbjct: 321 HLAETVCGGTTIP--------------YGEHQIDLGKPFERLTMIEAVKKYAGVDFNEIK 366

Query: 319 SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           +      +               D +N +    
Sbjct: 367 TTEEAKALAKEKHIEFEDRHKRGDILNLFFEEY 399



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 60/160 (37%), Gaps = 30/160 (18%)

Query: 417 RNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           R+     L +     +  +  +  +IMD P               +P T  +        
Sbjct: 385 RHKRGDILNLFFEEYVEEHLIQPTFIMDHP------------IEISPLTKKKPDAPDY-- 430

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYR 527
                    +++L  NG+E+ +     +      + F     +    +           R
Sbjct: 431 -------VERFELFINGWEMCNAYSELNDPIDQRERFKAQEEALSNGDEEANRTDEDFLR 483

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++
Sbjct: 484 ALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLFPTMKS 523


>gi|74314615|ref|YP_313034.1| lysyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|73858092|gb|AAZ90799.1| lysine tRNA synthetase, inducible [Shigella sonnei Ss046]
          Length = 505

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHEEFDAKNNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIITEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIITEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 426 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|29374909|ref|NP_814062.1| lysyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227520053|ref|ZP_03950102.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227555914|ref|ZP_03985961.1| lysyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229550491|ref|ZP_04439216.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255974768|ref|ZP_05425354.1| lysyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256762063|ref|ZP_05502643.1| lysyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256956804|ref|ZP_05560975.1| lysyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256960609|ref|ZP_05564780.1| lysyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256964191|ref|ZP_05568362.1| lysyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257078473|ref|ZP_05572834.1| lysyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257081555|ref|ZP_05575916.1| lysyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257084203|ref|ZP_05578564.1| lysyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257088030|ref|ZP_05582391.1| lysyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257417633|ref|ZP_05594627.1| lysyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257418642|ref|ZP_05595636.1| lysyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|293382696|ref|ZP_06628621.1| lysine--tRNA ligase [Enterococcus faecalis R712]
 gi|293388122|ref|ZP_06632649.1| lysine--tRNA ligase [Enterococcus faecalis S613]
 gi|294779306|ref|ZP_06744709.1| lysine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307268521|ref|ZP_07549896.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307274232|ref|ZP_07555440.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307278667|ref|ZP_07559737.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|312908592|ref|ZP_07767534.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312909260|ref|ZP_07768117.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|39932158|sp|Q839A8|SYK_ENTFA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|29342367|gb|AAO80133.1| lysyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227072601|gb|EEI10564.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227174971|gb|EEI55943.1| lysyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229304348|gb|EEN70344.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255967640|gb|EET98262.1| lysyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256683314|gb|EEU23009.1| lysyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256947300|gb|EEU63932.1| lysyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256951105|gb|EEU67737.1| lysyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256954687|gb|EEU71319.1| lysyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256986503|gb|EEU73805.1| lysyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256989585|gb|EEU76887.1| lysyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256992233|gb|EEU79535.1| lysyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256996060|gb|EEU83362.1| lysyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257159461|gb|EEU89421.1| lysyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|257160470|gb|EEU90430.1| lysyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|291079856|gb|EFE17220.1| lysine--tRNA ligase [Enterococcus faecalis R712]
 gi|291082498|gb|EFE19461.1| lysine--tRNA ligase [Enterococcus faecalis S613]
 gi|294453592|gb|EFG21991.1| lysine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|306504727|gb|EFM73927.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306509194|gb|EFM78256.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306515182|gb|EFM83722.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310625379|gb|EFQ08662.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311290502|gb|EFQ69058.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|315026774|gb|EFT38706.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315032988|gb|EFT44920.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315036599|gb|EFT48531.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315147110|gb|EFT91126.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315151137|gb|EFT95153.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315168161|gb|EFU12178.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315171399|gb|EFU15416.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315172632|gb|EFU16649.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315573576|gb|EFU85767.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315582076|gb|EFU94267.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0309A]
 gi|329577256|gb|EGG58720.1| lysine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 498

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 132/354 (37%), Gaps = 28/354 (7%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            S++ + V ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSAELHEQYDNHTKEELSEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G     + + +  N  TG++ + AQ I +L+ A   PLP 
Sbjct: 100 DQVGDEAYELFKHADL----GDFFGVTGQVMKTN--TGEVTVKAQTITLLTKALR-PLPD 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +       +KR++II+ +R  +    ++E  TP+L   +
Sbjct: 153 KYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETPVLHNEA 212

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 213 GGAAARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP- 270

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ +  D+++  E ++R   E+             I YD      G+    
Sbjct: 271 EFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTD-------ITYDGQAVDLGSPFKR 323

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           L     +   T      E  +                    G     F +   E
Sbjct: 324 LHMVDAVKEQTGVDFWQEMTIEEARALAKEHNVEITDAMTVGHIINEFFETFVE 377



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +      +  P       K N        +++L   G E A+     +      + F
Sbjct: 377 EDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRERF 436

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +E   +           A + G+PP GG+  GIDR+VMLL  A+++R+V LFP 
Sbjct: 437 EEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPT 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|260914425|ref|ZP_05920894.1| lysine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631526|gb|EEX49708.1| lysine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 501

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 70/298 (23%), Positives = 129/298 (43%), Gaps = 21/298 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   ++   V+++G +   R  G   F+ ++D  G  Q+    D+    +       W 
Sbjct: 55  ELKTQEI--EVKVAGRIMTRRAMGKATFITLQDMSGRIQLYVARDNLPDGVYAEDVGTWD 112

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L   G ++            T ++ +   ++E+L+ A   PLP        +  R++ R+
Sbjct: 113 L---GDIIGVKGTLF--KTKTNELTVRCTEVELLTKALR-PLPDKFHGLSDQETRYRQRY 166

Query: 131 LDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           LDL  +    +  + R+++I  +R   I++ F+E  TP+L        AR F+       
Sbjct: 167 LDLISNEESRRTFIIRSKVIAGIRDYFISKGFMEVETPMLQIIPGGASARPFITHHNALD 226

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D
Sbjct: 227 VDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHD 284

Query: 249 ILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           +++  E +LR +  +      V            F RI   DAI +YG DK  ++  +
Sbjct: 285 LMDNTEELLRKLAIDILGTTIVPYGEYEFDFGKPFERITMHDAILKYGADKGIVKEDL 342



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 67/181 (37%), Gaps = 12/181 (6%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHI--AQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
             D+      D         D    +  A++LGI     +    +++   +E   E   I
Sbjct: 324 MHDAILKYGADKGIVKEDLYDFDRAVTVAEKLGIEVQKSWGLGSLVNV-IFEEVAEHHLI 382

Query: 453 DFAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                 F M      S     ND       +++L   G EI +G    + +E   + F  
Sbjct: 383 QPT---FLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNERFDA 439

Query: 511 VGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  +
Sbjct: 440 QVAAKEAGDDEAMFKDEDFVTALEHGLPPTAGEGLGIDRLAMLFANAASIRDVILFPAMK 499

Query: 567 N 567
            
Sbjct: 500 Q 500


>gi|298675477|ref|YP_003727227.1| aspartyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298288465|gb|ADI74431.1| aspartyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 443

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 90/326 (27%), Positives = 144/326 (44%), Gaps = 27/326 (8%)

Query: 1   MHRYRTHSCGDLGVSD-VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDS 56
           M + RTH   D+   +     V L+GWVH VR  GGI F+ +RD  G+ QV       DS
Sbjct: 3   MEKLRTHHTRDIEPEEMADKSVTLAGWVHEVRDLGGICFVVLRDREGMAQVTLVKKKVDS 62

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVF 115
             F  AK +  E V+ + G V                 E+    I +L+ +    PL   
Sbjct: 63  DFFNKAKKLMRESVISVTGTV-------KPEEKAPNGYEVLPDDITVLNESCTPLPLDTT 115

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
           G+ E         R++DLR+         R  ++ ++R     E FIE +TP + A++ E
Sbjct: 116 GKVEAEMDTCLDSRYVDLRKPRTSAIFKIRHEVLKAVRDNFTREGFIETTTPKVVATATE 175

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           G       +  ++ +F  L Q+PQ +KQ+LM+ G ++ F+I P FR E+  + R   E  
Sbjct: 176 GGTSLFPITYFDREAF--LNQSPQLFKQILMSGGLEKVFEIGPIFRAEEHDTRRHLNEAT 233

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAI 283
            +DME SF +  DI+ T+EN +   + +              +       F R+ Y +AI
Sbjct: 234 SIDMESSFSDHFDIMETLENTIAHAYSQVKENASQQLEYLGIDLEVPETPFKRLTYSEAI 293

Query: 284 RRYGTD-KPDLRNPIIMHNVTEHFVH 308
                  K +L     +  ++EH + 
Sbjct: 294 DIINQYGKEELEWGDDLSTLSEHTLG 319



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 72/206 (34%), Gaps = 34/206 (16%)

Query: 376 AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF--- 432
            K       E + + L++ +         + +   +           +L  ++ +     
Sbjct: 262 VKENASQQLEYLGIDLEVPETPFKRLTYSEAIDIINQYGKEELEWGDDLSTLSEHTLGEH 321

Query: 433 -------EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
                     +I+D+P                PF                   +  +D++
Sbjct: 322 VYNETGAHHYFIIDWP------------TEIKPFYAMPYED--------NPEISKTFDMM 361

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
               E++SG  R H  +++     N G+      + F     AF+ GMPPH G   G +R
Sbjct: 362 HTRLELSSGAQRIHYYDMLKNRIENQGLDP----DSFDFYLDAFRYGMPPHAGWGLGCER 417

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDL 571
           ++M +LG +N+REV LFP  +     
Sbjct: 418 LLMTMLGLENIREVVLFPRDRRRLSP 443


>gi|218245720|ref|YP_002371091.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|218166198|gb|ACK64935.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 573

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 70/360 (19%), Positives = 140/360 (38%), Gaps = 35/360 (9%)

Query: 6   THSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--- 54
           TH+  +L           +V   V ++G +   R  G + F  ++D  G  Q+  +    
Sbjct: 45  THTAANLQDKYATLKDGEEVDLEVAIAGRIIARRVFGKLAFFSLQDETGTIQLYLDKQQI 104

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D++  E+  +  +   L   G ++             G++ +  Q   IL+ +  LPLP 
Sbjct: 105 DTSMTEVTDAFNTLKKLTDTGDILGVVGTIKRTE--KGELSVKVQTYTILTKSL-LPLPD 161

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRT-RIINSMRCRMIAENFIECSTPILTASS 173
                     R++ R++DL  +   +   +R  +I  S+R  +    FIE  TP+L + +
Sbjct: 162 KWHGLTDTEKRYRQRYVDLIVNPQVRQTFRRRAQITASIRRYLDENGFIEIETPVLQSEA 221

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  GF++ F++   FR+E   +   P 
Sbjct: 222 GGAEARPFITYHNTLDMELY-LRIATELHLKRLIIGGFEKVFELGRIFRNEGVSTKHNP- 279

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  D++   E ++    +       ++     I      RR       
Sbjct: 280 EFTSIEVYQAYADYFDMMELTEALITNAAQTVLGTLKLTYQETEIDLSTPWRR------- 332

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI------PAKGGGGNRAFCDRMNE 346
               + M ++ +     +F  F+   S     +   I      P+ G   N AF  ++ E
Sbjct: 333 ----VTMTDIVKEKTGLDFDSFTDFESAKEAAKKAGIDVPDDCPSLGKLMNEAFEQKVEE 388



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 54/158 (34%), Gaps = 27/158 (17%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
           C       N   ++   +     +  +I+DFP      E   +   H             
Sbjct: 371 CPSLGKLMNEAFEQ--KVEETLIQPTFILDFPV-----EISPLAKPHR------------ 411

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS----EVMLQAFSNVGISKEVVENRFGGL 525
                      +++L   G E+A+            E + +            +      
Sbjct: 412 ----SKKGLVERFELYIVGRELANSFSELTDPIDQRERLEKQAEQKAAGDLEAQGVDEDF 467

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A + GMPP GG+  GIDR+VMLL  + ++R+V  FP
Sbjct: 468 LTALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFP 505


>gi|82778344|ref|YP_404693.1| lysyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|123728505|sp|Q32BV3|SYK_SHIDS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81242492|gb|ABB63202.1| lysine tRNA synthetase, constitutive [Shigella dysenteriae Sd197]
          Length = 505

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 137/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHTEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +       V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQNILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 53/298 (17%), Positives = 94/298 (31%), Gaps = 23/298 (7%)

Query: 275 LRICYDDAIR--RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
             I + +A+    Y    P+L    ++    E          ++ +SV    E   +   
Sbjct: 222 PFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELY 281

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
               +      + E         +            +    P  K       +  R   D
Sbjct: 282 MAYADYKDLIELTESLFRTLAQNILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETD 341

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
           M D D+      D  K  + +       +  LG I    FE               E  +
Sbjct: 342 MADLDNF-----DSAKAIAESIGIHVEKSWGLGRIVTEIFEEV------------AEAHL 384

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
                    P       + ND+      +++    G EI +G    + +E   Q F +  
Sbjct: 385 IQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQV 444

Query: 513 ISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +K+  ++           A + G+PP  G+  GIDR+VML   +  +R+V LFP  +
Sbjct: 445 AAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMR 502


>gi|300921221|ref|ZP_07137594.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300411827|gb|EFJ95137.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1]
          Length = 505

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 137/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +       V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQNILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 53/298 (17%), Positives = 94/298 (31%), Gaps = 23/298 (7%)

Query: 275 LRICYDDAIR--RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
             I + +A+    Y    P+L    ++    E          ++ +SV    E   +   
Sbjct: 222 PFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELY 281

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
               +      + E         +            +    P  K       +  R   D
Sbjct: 282 MAYADYKDLIELTESLFRTLAQNILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETD 341

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
           M D D+      D  K  + +       +  LG I    FE               E  +
Sbjct: 342 MADLDNF-----DSAKAIAESIGIHVEKSWGLGRIVTEIFEEV------------AEAHL 384

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
                    P       + ND+      +++    G EI +G    + +E   Q F +  
Sbjct: 385 IQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQV 444

Query: 513 ISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +K+  ++           A + G+PP  G+  GIDR+VML   +  +R+V LFP  +
Sbjct: 445 AAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMR 502


>gi|186685281|ref|YP_001868477.1| lysyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|238689252|sp|B2J384|SYK_NOSP7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|186467733|gb|ACC83534.1| lysyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 561

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 66/353 (18%), Positives = 138/353 (39%), Gaps = 33/353 (9%)

Query: 2   HRYR---THSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           + YR   TH    L           +V   V ++G +   R  G + F  ++D  G  Q+
Sbjct: 25  YAYRWESTHHAAQLQEQFADLASGEEVDLEVAIAGRIMARRVFGKLAFFTLQDETGTIQL 84

Query: 51  VANPDSACFEIAK----SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV 106
             + +     +A     +      L   G ++             G++ +  ++  IL+ 
Sbjct: 85  YLDKNRIQESMADIDADAFNHLKQLTDAGDILGVKGTIKRTE--KGELSVYVKQYTILTK 142

Query: 107 AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRT-RIINSMRCRMIAENFIECS 165
           +  LPLP         + R++ R++DL  +   +   +R  +I   +R  +   +F+E  
Sbjct: 143 SL-LPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRRRAQITAGIRRYLEQRDFLEIE 201

Query: 166 TPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
           TP+L + +    AR F+      +   Y L  A + + + L+  GF++ F++   FR+E 
Sbjct: 202 TPVLQSEAGGADARPFITHHNTLEMELY-LRIATELHLKRLIVGGFEKVFELGRIFRNEG 260

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
             +   P EF  +++  ++ + +D++   E ++  V +E      ++     I      R
Sbjct: 261 ISTRHNP-EFTTIEVYQAYADYNDMMALTEGIITTVAQEVLGTLQITYQGEPIDLTPPWR 319

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
           R           + MH++ + F   +F  F  +       +   IP      +
Sbjct: 320 R-----------VTMHDLVKEFTGLDFNSFQTLEEAKTASKNAGIPGVDEAKS 361



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 52/153 (33%), Gaps = 30/153 (19%)

Query: 420 IAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           I + L +     +  N  +  +++D+P      E   +   H                  
Sbjct: 362 IGKLLNLAFEEKVEANLIQPTFVIDYPV-----EISPLAKPHR----------------S 400

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQ 530
                 +++L   G E  +            +        K       +        A +
Sbjct: 401 QPGLVERFELFIVGRETGNSFSELTDPIDQRERLEAQAERKAAGDLEAQGVDEDFLTALE 460

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP GG+  GIDR+VMLL  + ++R+V  FP
Sbjct: 461 YGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFP 493


>gi|323164582|gb|EFZ50382.1| lysyl-tRNA synthetase [Shigella sonnei 53G]
          Length = 505

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHEEFDAKNNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIITEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 67/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIITEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP   +  GIDR++ML
Sbjct: 426 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTADLGIGIDRMIML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|312964851|ref|ZP_07779091.1| lysyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312290407|gb|EFR18287.1| lysyl-tRNA synthetase [Escherichia coli 2362-75]
          Length = 505

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 138/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I++ +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNSGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVT--------------YGDVTLD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRSETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 21/202 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +    P  K       +  R   DM D D+      D  K  + +       +  LG I 
Sbjct: 318 LDFGKPFEKLTMREAIKKYRSETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIV 372

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE               E  +         P       + ND+      +++    G
Sbjct: 373 TEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG 420

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  GID
Sbjct: 421 REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VML   +  +R+V LFP  +
Sbjct: 481 RMVMLFTNSHTIRDVILFPAMR 502


>gi|169830349|ref|YP_001716331.1| lysyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
 gi|169637193|gb|ACA58699.1| lysyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
          Length = 490

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 68/292 (23%), Positives = 123/292 (42%), Gaps = 15/292 (5%)

Query: 3   RY-RTHSCG---DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           RY RTH      D      G  + L+G +   R HG   F D++D  G  Q     +   
Sbjct: 33  RYERTHLAAVVVDDYARLEGRELSLAGRLMAKRGHGKAAFGDLQDGSGKVQAYFRLNDLG 92

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E  +  ++  +    G+              TG++ ++     +L+ +   PLP     
Sbjct: 93  PEKYELFKTLDIGDFIGI------RGTVFKTRTGEVTVAVSDFVLLAKSLR-PLPEKWHG 145

Query: 119 EYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG- 176
                +R++ R+LDL  +   +   V R+RII ++R  +    F+E  TP++   +    
Sbjct: 146 LKDVELRYRQRYLDLIINPQSREVFVTRSRIIAAIRRYLDENGFLEVETPMMQTLAGGAV 205

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F         S + L  AP+ Y + L+  GFD+ ++I   FR+E   +   P EF  
Sbjct: 206 ARPFKTYHNALGISLF-LRIAPELYLKRLLVGGFDKVYEINRNFRNEGISTRHNP-EFTM 263

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           L++  ++ +  D++N  E ++  V E+    +       R+ ++    RY  
Sbjct: 264 LEIYEAYADYHDMMNLTERLISSVIEQVFTDHIFPYGEHRLDFNIPWPRYSM 315



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 60/150 (40%), Gaps = 25/150 (16%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
             +     +  +I D+P  E +   K+ + A +                      ++++L
Sbjct: 362 DKVQPQLVQPTFIYDYPL-ELSPLAKRHEDAPH--------------------LVYRFEL 400

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIA 540
              G EIA+     +      + F      ++  +            A + GMPP GG+ 
Sbjct: 401 FIAGREIANAFSELNDPVDQRERFQAQLEKRKRGDEEAHVFDEDFVTALEYGMPPAGGLG 460

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GIDR++MLL  + ++R+V LFP+ +   D
Sbjct: 461 IGIDRLIMLLTDSPSIRDVILFPLLRPRED 490


>gi|332160510|ref|YP_004297087.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325664740|gb|ADZ41384.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330863445|emb|CBX73564.1| lysyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 505

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/357 (21%), Positives = 143/357 (40%), Gaps = 35/357 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y   +  +L   D+   V ++G +   R  G   F+ ++D  G  Q+  + D     +  
Sbjct: 53  YGEKTNEELEALDI--EVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYN 110

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++    +       TG++ +   ++ +L+ A   PLP        + 
Sbjct: 111 EEFKKWDL---GDILGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQE 164

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL  +   +N  K R+++++ +R  M+ + F+E  TP++        AR F+
Sbjct: 165 TRYRQRYLDLIANDESRNTFKVRSQVMSGIRRFMVEKGFMEVETPMMQVIPGGASARPFV 224

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M
Sbjct: 225 THHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYM 282

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E + R + E                   ++ +YG    D   P     
Sbjct: 283 AYADYKDLIALTEELFRTLTETVLG--------------SSVVQYGDQTFDFGKPFAKLT 328

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351
           + E          + +  ++   +  AI         K  G  R  C+   E A S 
Sbjct: 329 MKEAICKYRPE--TNVADLDDMDKAVAIAESLGIKVEKSWGLGRVQCEIFEETAESH 383



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 70/205 (34%), Gaps = 21/205 (10%)

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
                   P AK          R   ++ D D       D     + +   +   +  LG
Sbjct: 315 DQTFDFGKPFAKLTMKEAICKYRPETNVADLDDM-----DKAVAIAESLGIKVEKSWGLG 369

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
            + C  FE               E  +         P       + ND       +++  
Sbjct: 370 RVQCEIFE------------ETAESHLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFF 417

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAA 541
             G EI +G    + +E   Q F++   +KE  ++           A + G+PP  G+  
Sbjct: 418 IGGREIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGI 477

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           GIDR+VML   +  +R+V LFP  +
Sbjct: 478 GIDRMVMLFTNSHTIRDVILFPAMR 502


>gi|323171560|gb|EFZ57206.1| lysyl-tRNA synthetase [Escherichia coli LT-68]
          Length = 505

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 75/323 (23%), Positives = 136/323 (42%), Gaps = 31/323 (9%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHEEFDAKNNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  +++ M++ +  D++   E++ R + +E      V+           F ++   +AI
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAI 333

Query: 284 RRYGT--DKPDLRNPIIMHNVTE 304
           ++Y    D  DL N      + E
Sbjct: 334 KKYRPETDMADLDNFDAAKELAE 356



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 63/157 (40%), Gaps = 8/157 (5%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNE-EEKKIDFAHNPFTMPQGGMESLKGND 473
           DA   +A+ +GI     +    I+      ++E  E  +         P       + ND
Sbjct: 349 DAAKELAESIGITVEKSWGLGRIV---TEIFDEVAEAHLIQPTFITEYPAEVSPLARRND 405

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAF 529
           +      +++    G EI +G    + +E   + F     +K   ++           A 
Sbjct: 406 VNPEITDRFEFFIGGREIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTAL 465

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + G+PP  G+  GIDR++ML   +  +R+V LFP  +
Sbjct: 466 EYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFPAMR 502


>gi|254781118|ref|YP_003065531.1| lysyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040795|gb|ACT57591.1| lysyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 502

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 111/580 (19%), Positives = 193/580 (33%), Gaps = 143/580 (24%)

Query: 2   HRYRTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +R  +  ++                + ++G V+  R  G  +F+DI D  G  Q+  +
Sbjct: 36  HFHRDITNAEVREKYSHLQNDEKSQDMITVAGRVYSSRNSG--MFMDIHDASGKIQIFTH 93

Query: 54  PDSACFEIAKSVRSEWVLCI---DGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
            D+A  +    +    +  I    G V              G++ ++AQKI +LS A   
Sbjct: 94  KDTADQDSQNLLSMIDIGDIIGITGQVRRTKR---------GELTVNAQKIIMLSKAL-N 143

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
            +P          IR++ R+LD+  ++  K   + R+ +I+ +R  M  + F+E  TPIL
Sbjct: 144 SIPETYYGLSDVEIRYRKRYLDIISNSDSKIRFQQRSLLISQIRHFMEKKGFMEVETPIL 203

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSD 228
                    D          +   L  AP+ Y + ++ SG  D+ F++   FR+E   S 
Sbjct: 204 QPIYGGATADPFKTHHNILKADMYLRIAPELYLKRVLISGLTDQVFELNRNFRNEGVSSR 263

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  ++   ++ +  D    M  ++  +    +                       
Sbjct: 264 HNP-EFTMIEAYWAYTDYRD----MMKLVEDLCHNLAK---------------------- 296

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
                     +H  T+     +   F    +                     C  M +  
Sbjct: 297 ---------TLHGTTDIPFGEKVISFKAPFA---------------------CKSMLQLV 326

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
           +     GL ++  + D+   VA                I V  D   G+    I  +   
Sbjct: 327 KE--ATGLDFMLLKSDQEARVAAQS-----------IGITVENDALWGEVMMTIFEEK-- 371

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                             I  N      I DFP        K I    +PF     G   
Sbjct: 372 ------------------IEKNIVNPTHITDFP--------KDI----SPFAKEVAG--- 398

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM-----LQAFSNVGISKEVVENRFG 523
                       +++  CNG+EI +     +           Q   +    +  + +   
Sbjct: 399 ------EKRLVERFETYCNGWEICNAFSELNDPVEQRIRMEQQVEQSHQRGEHTILDE-- 450

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               A   GMPP  G+  GIDR++MLL  A ++R+V LFP
Sbjct: 451 DFLDAMTYGMPPASGLGLGIDRLIMLLTNAPSIRDVILFP 490


>gi|318607021|emb|CBY28519.1| lysyl-tRNA synthetase (class II) [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 505

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/357 (21%), Positives = 143/357 (40%), Gaps = 35/357 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y   +  +L   D+   V ++G +   R  G   F+ ++D  G  Q+  + D     +  
Sbjct: 53  YGEKTNEELEALDI--EVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYN 110

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++    +       TG++ +   ++ +L+ A   PLP        + 
Sbjct: 111 EEFKKWDL---GDILGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQE 164

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL  +   +N  K R+++++ +R  M+ + F+E  TP++        AR F+
Sbjct: 165 TRYRQRYLDLIANDESRNTFKVRSQVMSGIRRFMVEKGFMEVETPMMQVIPGGASARPFV 224

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M
Sbjct: 225 THHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYM 282

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E + R + E                   ++ +YG    D   P     
Sbjct: 283 AYADYKDLIALTEELFRTLTETVLG--------------SSVVQYGDQTFDFDKPFAKLT 328

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351
           + E          + +  ++   +  AI         K  G  R  C+   E A S 
Sbjct: 329 MKEAICKYRPE--TNVADLDDMDKAVAIAESLGIKVEKSWGLGRVQCEIFEETAESH 383



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 70/205 (34%), Gaps = 21/205 (10%)

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
                   P AK          R   ++ D D       D     + +   +   +  LG
Sbjct: 315 DQTFDFDKPFAKLTMKEAICKYRPETNVADLDDM-----DKAVAIAESLGIKVEKSWGLG 369

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
            + C  FE               E  +         P       + ND       +++  
Sbjct: 370 RVQCEIFE------------ETAESHLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFF 417

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAA 541
             G EI +G    + +E   Q F++   +KE  ++           A + G+PP  G+  
Sbjct: 418 IGGREIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGI 477

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           GIDR+VML   +  +R+V LFP  +
Sbjct: 478 GIDRMVMLFTNSHTIRDVILFPAMR 502


>gi|259909550|ref|YP_002649906.1| lysyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224965172|emb|CAX56704.1| Lysyl tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283479627|emb|CAY75543.1| lysyl-tRNA synthetase [Erwinia pyrifoliae DSM 12163]
          Length = 506

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 70/302 (23%), Positives = 129/302 (42%), Gaps = 24/302 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L  
Sbjct: 61  LEALGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLADGIYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              D   K    R++I+  +R  M+  +F+E  TP++ A      AR F+          
Sbjct: 175 IANDDSRKTFKIRSQIMAGIRNFMVGRDFMEVETPMMQAIPGGASARPFITHHNALDLDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGT-----DKPDLRNPI 297
             E++ R + ++      V            F ++   +AI +Y       D  D    +
Sbjct: 293 LTESLFRTLAQDVLGSTVVPYGDQQFDFGKPFAQLTMKEAILKYRPQTDLADLADFEKSV 352

Query: 298 IM 299
            +
Sbjct: 353 AI 354



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 5/131 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E   +         P       + ND+      +++    G EI +G    + ++
Sbjct: 376 FEETAEA-HLIQPTFITEYPAEVSPLARRNDVDPEITDRFEFFIGGREIGNGFSELNDAQ 434

Query: 503 VMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F     +K+  ++           A + G+PP  G+  GIDR+VML   +  +R+
Sbjct: 435 DQAERFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGVGIDRMVMLFTNSHTIRD 494

Query: 559 VSLFPMSQNFC 569
           V LFP  +   
Sbjct: 495 VILFPALRPGS 505


>gi|310766542|gb|ADP11492.1| lysyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 506

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 70/302 (23%), Positives = 129/302 (42%), Gaps = 24/302 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +G  V ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L  
Sbjct: 61  LEALGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLADGIYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              D   K    R++I+  +R  M+  +F+E  TP++ A      AR F+          
Sbjct: 175 IANDDSRKTFKIRSQIMAGIRNFMVGRDFMEVETPMMQAIPGGASARPFITHHNALDLDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGT-----DKPDLRNPI 297
             E++ R + ++      V            F ++   +AI +Y       D  D    +
Sbjct: 293 LTESLFRTLAQDVLGSTVVPYGDQQFDFGKPFAQLTMKEAILKYRPQTDLADLADFEKSV 352

Query: 298 IM 299
            +
Sbjct: 353 AI 354



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 5/131 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E   +         P       + ND+      +++    G EI +G    + ++
Sbjct: 376 FEETAEA-HLIQPTFITEYPAEVSPLARRNDVDPEITDRFEFFIGGREIGNGFSELNDAQ 434

Query: 503 VMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F     +K+  ++           A + G+PP  G+  GIDR+VML   +  +R+
Sbjct: 435 DQAERFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGVGIDRMVMLFTNSHTIRD 494

Query: 559 VSLFPMSQNFC 569
           V LFP  +   
Sbjct: 495 VILFPALRPGS 505


>gi|123443572|ref|YP_001007545.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166230601|sp|A1JPL4|SYK_YERE8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|122090533|emb|CAL13402.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 505

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/357 (21%), Positives = 143/357 (40%), Gaps = 35/357 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y   +  +L   D+   V ++G +   R  G   F+ ++D  G  Q+  + D     +  
Sbjct: 53  YGEKTNEELEALDI--EVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYN 110

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++    +       TG++ +   ++ +L+ A   PLP        + 
Sbjct: 111 EEFKKWDL---GDILGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQE 164

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL  +   +N  K R+++++ +R  M+ + F+E  TP++        AR F+
Sbjct: 165 TRYRQRYLDLIANDESRNTFKVRSQVMSGIRRFMVEKGFMEVETPMMQVIPGGASARPFV 224

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M
Sbjct: 225 THHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYM 282

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E + R + E                   ++ +YG    D   P     
Sbjct: 283 AYADYKDLIALTEELFRTLTETVLG--------------SSVVQYGDQTFDFGKPFAKLT 328

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351
           + E          + +  ++   +  AI         K  G  R  C+   E A S 
Sbjct: 329 MKEAICKYRPE--TNVADLDDMDKAVAIAESLGIKVEKSWGLGRVQCEIFEETAESH 383



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 70/205 (34%), Gaps = 21/205 (10%)

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
                   P AK          R   ++ D D       D     + +   +   +  LG
Sbjct: 315 DQTFDFGKPFAKLTMKEAICKYRPETNVADLDDM-----DKAVAIAESLGIKVEKSWGLG 369

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
            + C  FE               E  +         P       + ND       +++  
Sbjct: 370 RVQCEIFE------------ETAESHLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFF 417

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAA 541
             G EI +G    + +E   Q F++   +KE  ++           A + G+PP  G+  
Sbjct: 418 IGGREIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGI 477

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           GIDR+VML   +  +R+V LFP  +
Sbjct: 478 GIDRMVMLFTNSHTIRDVILFPAMR 502


>gi|327534065|gb|AEA92899.1| lysine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 498

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 132/354 (37%), Gaps = 28/354 (7%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            S++ + V ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSAELHEQYDNHTKEELSEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G     + + +  N  TG++ + AQ I +L+ A   PLP 
Sbjct: 100 DQVGDEAYELFKHADL----GDFFGVTGQVMKTN--TGEVTVKAQTITLLTKALR-PLPD 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +       +KR++II+ +R  +    ++E  TP+L   +
Sbjct: 153 KYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETPVLHNEA 212

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 213 GGAAARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP- 270

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ +  D+++  E ++R   E+             I YD      G+    
Sbjct: 271 EFTMLEAYTAYTDYQDVMDLTEGIIRNATEKVLGTTD-------ITYDGQAVDLGSPFKR 323

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           L     +   T      E  +                    G     F +   E
Sbjct: 324 LHMVDAVKEQTGVDFWQEMTIEEARALAKEHNVEITDAMTVGHIINEFFETFVE 377



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +      +  P       K N        +++L   G E A+     +      + F
Sbjct: 377 EDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRERF 436

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +E   +           A + G+PP GG+  GIDR+VMLL  A+++R+V LFP 
Sbjct: 437 EEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPT 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|147676598|ref|YP_001210813.1| lysyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|259511529|sp|A5D5Q4|SYK_PELTS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|146272695|dbj|BAF58444.1| lysyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 506

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 63/285 (22%), Positives = 116/285 (40%), Gaps = 14/285 (4%)

Query: 5   RTHSCG---DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+     D  V      V ++G +   R  G   F  I+D  G  Q+    +    E 
Sbjct: 50  RTHTARYILDNFVEMENRPVVIAGRIMSRRGMGKATFAHIQDGTGQIQIYVRLNDVGPES 109

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +      +    G ++          +  G+I ++A+  +ILS +   PLP        
Sbjct: 110 YELFGRLDI----GDIIGVQGSVFKTRM--GEITVAAESFKILSKSLR-PLPEKWHGLRD 162

Query: 122 ESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
             +R++ R++DL  +   K +   R++II + R  +  + F+E  TP++        AR 
Sbjct: 163 VELRYRQRYVDLIVNPEVKEVFETRSKIIRACRNFLDGKGFLEVETPMMQVIPGGAAARP 222

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  GF++ ++I   FR+E   +   P EF  L++
Sbjct: 223 FITHHNALDMDLY-LRIAPELYLKRLLVGGFEKVYEINRNFRNEGISTKHNP-EFTMLEL 280

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
             ++ +  D++N  E ++  V  E      +      I       
Sbjct: 281 YQAYADYTDMMNLTEELISAVAVEALGTTKIEYQGTEIDLAPPWP 325



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 56/149 (37%), Gaps = 25/149 (16%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            ++     +  +++D+P               +P    +     L          ++++L
Sbjct: 379 EVVEPKLIQPTFVVDYP------------VEISPLAKRKAEDPEL---------TYRFEL 417

Query: 485 VCNGFEIASGGIRNHMSEVM----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
              G EIA+     +         L+         E           A + GMPP GG+ 
Sbjct: 418 FIYGREIANAFSELNDPIDQKGRFLKQVEKRKAGDEEAHMMDEDYINALEYGMPPAGGLG 477

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            GIDR+VMLL  + ++R+V LFP+ +   
Sbjct: 478 IGIDRLVMLLTNSASIRDVILFPLMKPRE 506


>gi|229546902|ref|ZP_04435627.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|255971768|ref|ZP_05422354.1| lysyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256855222|ref|ZP_05560583.1| lysyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|257088707|ref|ZP_05583068.1| lysyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|307290186|ref|ZP_07570104.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|312904623|ref|ZP_07763778.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|312952668|ref|ZP_07771532.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|229307830|gb|EEN73817.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|255962786|gb|EET95262.1| lysyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256709735|gb|EEU24782.1| lysyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256997519|gb|EEU84039.1| lysyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|306498742|gb|EFM68241.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|310629456|gb|EFQ12739.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310631975|gb|EFQ15258.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315028813|gb|EFT40745.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315153548|gb|EFT97564.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315156272|gb|EFU00289.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315158583|gb|EFU02600.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315160788|gb|EFU04805.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315579387|gb|EFU91578.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|323479481|gb|ADX78920.1| lysyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 498

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 132/354 (37%), Gaps = 28/354 (7%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            S++ + V ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSAELHEQYDNHTKEELSEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G     + + +  N  TG++ + AQ I +L+ A   PLP 
Sbjct: 100 DQVGDEAYELFKHADL----GDFFGVTGQIMKTN--TGEVTVKAQTITLLTKALR-PLPD 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +       +KR++II+ +R  +    ++E  TP+L   +
Sbjct: 153 KYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETPVLHNEA 212

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 213 GGAAARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP- 270

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ +  D+++  E ++R   E+             I YD      G+    
Sbjct: 271 EFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTD-------ITYDGQAVDLGSPFKR 323

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           L     +   T      E  +                    G     F +   E
Sbjct: 324 LHMVDAVKEQTGVDFWQEMTIEEARALAKEHNVEITDAMTVGHIINEFFETFVE 377



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +      +  P       K N        +++L   G E A+     +      + F
Sbjct: 377 EDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRERF 436

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +E   +           A + G+PP GG+  GIDR+VMLL  A+++R+V LFP 
Sbjct: 437 EEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPT 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|16077150|ref|NP_387963.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221307892|ref|ZP_03589739.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221312214|ref|ZP_03594019.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221317147|ref|ZP_03598441.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221321410|ref|ZP_03602704.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|586058|sp|P37477|SYK_BACSU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|467470|dbj|BAA05316.1| lysyl-tRNA thynthetase [Bacillus subtilis]
 gi|2632349|emb|CAB11858.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 499

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 64/328 (19%), Positives = 132/328 (40%), Gaps = 28/328 (8%)

Query: 5   RTHSCGD-------LGVSDVGS---FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   +       L   ++      V ++G +   R  G   F  ++D  G  Q+    
Sbjct: 39  RTHQSQEVISAYQDLTKEELEEKAIEVTIAGRMMTKRGKGKAGFAHLQDLEGQIQIYVRK 98

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   +  +  +S  +    G ++  + +    N+  G++ + A   E+L+ A   PLP 
Sbjct: 99  DSVGDDQYEIFKSSDL----GDLIGVTGKVFKTNV--GELSVKATSFELLTKALR-PLPD 151

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +   K+  + R++II +MR  +    ++E  TP + +  
Sbjct: 152 KYHGLKDVEQRYRQRYLDLIVNPDSKHTFITRSKIIQAMRRYLDDHGYLEVETPTMHSIP 211

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 212 GGASARPFITHHNALDIPLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP- 269

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP- 291
           EF  +++  ++ +  DI++  EN++  + +E     T+     +I      +R       
Sbjct: 270 EFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGTTTIQYGEEQIDLKPEWKRIHMVDAV 329

Query: 292 ------DLRNPIIMHNVTEHFVHSEFRV 313
                 D    + +    E+    E  +
Sbjct: 330 KEATGVDFWEEVTVEQAREYAKEHEVEI 357



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 9/133 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F       +  L   +    +   +++L   G E A+     +
Sbjct: 370 FFEQKIEETLIQPT---FIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELN 426

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F      +E   +           A + GMPP GG+  GIDR+VMLL  A +
Sbjct: 427 DPIDQRERFEAQLKEREAGNDEAHLMDEDFVEALEYGMPPTGGLGIGIDRLVMLLTNAPS 486

Query: 556 VREVSLFPMSQNF 568
           +R+V LFP  +  
Sbjct: 487 IRDVLLFPQMRQR 499


>gi|238787317|ref|ZP_04631116.1| Lysyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238724579|gb|EEQ16220.1| Lysyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 505

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/357 (20%), Positives = 142/357 (39%), Gaps = 35/357 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y +    +L   ++   V ++G +   R  G   F+ ++D  G  Q+  + D     +  
Sbjct: 53  YDSKENEELEALNI--EVTVAGRMMTRRIMGKASFVTLQDVGGKIQLYVSRDDLPEGVYN 110

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++    +       TG++ +   ++ +L+ A   PLP        + 
Sbjct: 111 EEFKKWDL---GDILGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQE 164

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL  +   ++  K R+++++ +R  M+ + F+E  TP++        AR F+
Sbjct: 165 TRYRQRYLDLIANDESRHTFKVRSQVMSGIRRFMVEKGFMEVETPMMQVIPGGASARPFV 224

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M
Sbjct: 225 THHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYM 282

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E + R + E                    + +YG    D   P     
Sbjct: 283 AYADYKDLIVLTEELFRTLTETVLG--------------SCVVQYGEQTFDFGKPFAKLT 328

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351
           + E          + +  ++   +  AI         K  G  R  C+   E A S 
Sbjct: 329 MKEAICKYRPE--TNVADLDDMDKALAIAESLGIKVEKSWGLGRVQCEIFEETAESH 383



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 70/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P AK          R   ++ D D       D     + +   +   +  LG + C  FE
Sbjct: 323 PFAKLTMKEAICKYRPETNVADLDDM-----DKALAIAESLGIKVEKSWGLGRVQCEIFE 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND       +++    G EI +
Sbjct: 378 ------------ETAESHLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F++   +KE  ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|309389964|gb|ADO77844.1| lysyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 493

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 80/391 (20%), Positives = 147/391 (37%), Gaps = 40/391 (10%)

Query: 2   HRYR-THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
            +Y+ TH   ++           VRL+G +  +R HG   F D+ D  G  Q+    ++ 
Sbjct: 33  EKYKVTHHAAEVESNFAELEEKEVRLAGRLMAIRTHGKASFADLVDMSGKVQLYVKQNNI 92

Query: 58  C---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
               +E  + +    V+ I G V   +          GQI +     E+L+ +   PLP 
Sbjct: 93  GEDRYEFFQDLDLGDVVGITGTVFKTNR---------GQISIRVASFELLTKSLR-PLPE 142

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                  + IR++ R+LDL  +  + +  V R++II  MR  +  + F+E  TP++   +
Sbjct: 143 KFHGLKDKDIRYRQRYLDLIVNPDVKETFVIRSKIIKEMRRYLEDKGFLEVETPMMHPIA 202

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF++ F+I   FR+E       P 
Sbjct: 203 GGATARPFVTHHNALDMDLY-LRIAPELYLKKLIVGGFEKVFEINRNFRNEGMSYKHNP- 260

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  +  +  D++   EN++  +  E  +   V      I +     R       
Sbjct: 261 EFTTMELYQAQADYHDMMELTENLISYLAAEVLDTQVVEYEETEIDFTAPWDR------- 313

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEWARSQ 351
               I M +  + +   +F                 + P  G        +   E    +
Sbjct: 314 ----ITMVDAIKKYAKVDFSAIESAEEAYELAASVGVKPEPGLSYGEVINEVFEERVEEK 369

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
                  I         +  + P+AK ++  
Sbjct: 370 ------LIQPTFIMDYPIE-VSPLAKKMDED 393



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 13/132 (9%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQG----GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           +E   EEK I      F M        +      D      ++++    G EIA+     
Sbjct: 362 FEERVEEKLIQPT---FIMDYPIEVSPLAKKMDEDPR--FTYRFEAFVYGREIANAFSEL 416

Query: 499 HMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +  E   + F      +E  +           RA + GMPP GG+  GIDR++M L  + 
Sbjct: 417 NDPEEQKRRFEKQVEMREAGDEEAQMMDYDFIRALEYGMPPTGGLGIGIDRLIMFLTNSS 476

Query: 555 NVREVSLFPMSQ 566
           ++R+V LFP  +
Sbjct: 477 SIRDVILFPTMR 488


>gi|319787301|ref|YP_004146776.1| lysyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465813|gb|ADV27545.1| lysyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 509

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 71/305 (23%), Positives = 120/305 (39%), Gaps = 29/305 (9%)

Query: 4   YRTHSCGDLGVS--DVGS-----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
            R    GDL     D G             V ++G +   R  G   F  + D  G  Q+
Sbjct: 42  KRADYAGDLQAEFADAGQWTGEALEALPRTVAIAGRLMAKRVMGKASFAQVMDESGRIQL 101

Query: 51  VA--NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
               N     +E  KS     ++ ++G +             TG++ L A  + +L  + 
Sbjct: 102 FLQGNVLGEAYEAFKSFDIGDIVAVEGGL---------TRTRTGELSLKATSLRLLVKSL 152

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
             PLP           R++ R++DL       +  VKR++II ++R  +    F+E  TP
Sbjct: 153 R-PLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFVKRSKIIRAIRSWLDERRFLEVETP 211

Query: 168 ILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           ++        AR F+          Y L  AP+ Y + L+  G +R ++I   FR+E   
Sbjct: 212 MMHYIPGGATARPFVTHHNALDLQLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVS 270

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +   P EF  L++  ++    ++++  ENV+R           V     RI    A RR+
Sbjct: 271 TRHNP-EFTMLELYEAYATYHEVMDLTENVIRDTARSVLGTTEVEWEGQRIDLGPAFRRW 329

Query: 287 GTDKP 291
             D+ 
Sbjct: 330 RMDEA 334



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 4/104 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGL 525
           + +D       +++L  NG E+A+G    +  E     F     +K    +   +     
Sbjct: 404 RASDTEPGYTDRFELFINGKELANGFSELNDPEDQAARFQAQVAAKEGGDDEAMHYDADY 463

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            RA + GM P GG+  GIDR+VMLL G+ ++R+V LFP  +   
Sbjct: 464 IRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLFPYMRPGQ 507


>gi|150014997|ref|YP_001307251.1| lysyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149901462|gb|ABR32295.1| lysyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 501

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 72/318 (22%), Positives = 148/318 (46%), Gaps = 24/318 (7%)

Query: 5   RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+  ++     +  G  V ++G +   R  G ++F DI D  G  Q+    D    E 
Sbjct: 44  RTHTSEEVKANYDALEGKEVTVAGRLMSKRGQGKVVFSDIHDKDGKIQLFLKIDKVGEEN 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  ++  +    G  ++ + E       TG++ ++    E+   + + PLP        
Sbjct: 104 LKQYKTFDL----GDWIAATGEVFTTK--TGEVSVNVNTFELTCKSLK-PLPEKWHGLKD 156

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-RD 179
             +R++ R +D+  +T  K+  +KR++II+++R  + A++FIE  TPIL A +   A + 
Sbjct: 157 PDLRYRQREVDIITNTEVKDTFIKRSKIISAIREFLDAKSFIEVETPILGAIAGGAAAKP 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+ +GF++ ++I   FR+ +  S R   EF  +++
Sbjct: 217 FITHHNTLDMDMY-LRIATELYLKRLIVAGFEKVYEIGRNFRN-EGMSVRHNPEFTAIEL 274

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTD 289
             ++ + +D++   EN++  + E+ +    V+           + RI   DA++ Y G D
Sbjct: 275 YEAYSDYNDMMEITENMVAYICEKVNGTTKVAYQGTEIDFKPPWRRITMVDAVKEYAGVD 334

Query: 290 KPDLRNPIIMHNVTEHFV 307
             ++++      + +   
Sbjct: 335 FNEIKSDDEAQTIAKEKH 352


>gi|257421557|ref|ZP_05598547.1| lysyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|257163381|gb|EEU93341.1| lysyl-tRNA synthetase [Enterococcus faecalis X98]
          Length = 485

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 132/354 (37%), Gaps = 28/354 (7%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            S++ + V ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSAELHEQYDNHTKEELSEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G     + + +  N  TG++ + AQ I +L+ A   PLP 
Sbjct: 100 DQVGDEAYELFKHADL----GDFFGVTGQIMKTN--TGEVTVKAQTITLLTKALR-PLPD 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +       +KR++II+ +R  +    ++E  TP+L   +
Sbjct: 153 KYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETPVLHNEA 212

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 213 GGAAARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP- 270

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ +  D+++  E ++R   E+             I YD      G+    
Sbjct: 271 EFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTD-------ITYDGQAVDLGSPFKR 323

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           L     +   T      E  +                    G     F +   E
Sbjct: 324 LHMVDAVKEQTGVDFWQEMTIEEARALAKEHNVEITDAMTVGHIINEFFETFVE 377



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 39/109 (35%), Gaps = 4/109 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +      +  P       K N        +++L   G E A+     +      + F
Sbjct: 377 EDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRERF 436

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
                 +E   +           A + G+PP GG+  GIDR+VMLL  A
Sbjct: 437 EEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVMLLTDA 485


>gi|229846241|ref|ZP_04466353.1| lysyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229811245|gb|EEP46962.1| lysyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 502

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 70/299 (23%), Positives = 132/299 (44%), Gaps = 20/299 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G++ + + G  V+++G +   R  G   F+ I+D  G  Q+    D+   ++ K     W
Sbjct: 54  GEI-LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEDVYKDDVGTW 112

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L   G ++            T ++ +   ++++L+ A   PLP        +  R++ R
Sbjct: 113 DL---GDIIGVKGTLF--KTKTDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEARYRQR 166

Query: 130 FLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +    +  + R++++  +R   I++ F+E  TP+L        AR F+      
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNAL 226

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  
Sbjct: 227 DVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYH 284

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           D+++  E +LR +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 285 DLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATVKYGADKGIVKEDL 343



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 61/153 (39%), Gaps = 10/153 (6%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+ LGI     +    I++   +E   E   +      F M      S     ND     
Sbjct: 353 AERLGIEVQKSWGLGSIVNA-IFEEVAEHHLVQPT---FLMAHPAEISPLARRNDENPDV 408

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMP 534
             +++L   G EI +G    + +E   + F     +KE  ++           A + G+P
Sbjct: 409 TDRFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           P  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|329296880|ref|ZP_08254216.1| lysyl-tRNA synthetase [Plautia stali symbiont]
          Length = 506

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/357 (20%), Positives = 138/357 (38%), Gaps = 35/357 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y +    +L    +G  V ++G +   R  G   F  ++D  G  Q+  + D     +  
Sbjct: 53  YDSKENDEL--EALGVEVSVAGRMITRRIMGKASFATLQDVGGQIQIYVSRDDLPEGVYN 110

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++    +       TG++ +   ++ +L+ A   PLP        + 
Sbjct: 111 EQFKKWDL---GDILGARGKLF--KTKTGELSIHISELRLLTKALR-PLPDKFHGLADQE 164

Query: 124 IRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL  +   +     R++I+  +R  M+  +F+E  TP++        AR F+
Sbjct: 165 TRYRQRYLDLISNDDSRKTFKIRSQIMAGIRQFMVNRDFMEVETPMMQVIPGGASARPFI 224

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  +++ M
Sbjct: 225 THHNALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGI-SPRHNPEFTMMELYM 282

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E++ R + ++      V               YG    D   P     
Sbjct: 283 AYADYKDLIELTESLFRTLAQDVLGTTEVP--------------YGEHTFDFGKPFEKLT 328

Query: 302 VTEHFVHS-------EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           + E            +   F K +++     +     K  G  R   +   E A + 
Sbjct: 329 MREAIKKYRPETDLADLDDFDKAVAIANALHIK--VEKSWGLGRVVTEIFEETAEAH 383



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 68/194 (35%), Gaps = 21/194 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   D+ D D       D  K  + A      + +  G+       
Sbjct: 323 PFEKLTMREAIKKYRPETDLADLD-------DFDKAVAIANALHIKVEKSWGLGRV---- 371

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
              + +   +E   E   +         P       + ND       +++    G EI +
Sbjct: 372 ---VTE--IFEETAEA-HLIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K+  ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAERFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRLVML 485

Query: 550 LLGAKNVREVSLFP 563
              +  +R+V LFP
Sbjct: 486 FTNSHTIRDVILFP 499


>gi|170718674|ref|YP_001783868.1| lysyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189082960|sp|B0URW9|SYK_HAES2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|168826803|gb|ACA32174.1| lysyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 502

 Score =  212 bits (539), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 66/291 (22%), Positives = 125/291 (42%), Gaps = 19/291 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+++G +   R  G   F+ ++D  G  Q+    D+    +       W L   G +
Sbjct: 60  GIEVKVAGRIMTRRVMGKATFITLQDMSGKIQLYVARDNLAEGVYTDDVGNWDL---GDI 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +            T ++ + A ++ +L+ A   PLP        +  R++ R+LDL  + 
Sbjct: 117 VGVKGTLF--KTKTNELTIRATEVHLLTKALR-PLPNKFHGLSDQETRYRQRYLDLIANE 173

Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
              +  + R+++I  +R   I++ F+E  TP+L        AR F+          Y L 
Sbjct: 174 DSRRTFIIRSKVIAGIREYFISKGFMEVETPMLQIIPGGASARPFITHHNALDVDMY-LR 232

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ +  D+++  E 
Sbjct: 233 IAPELYLKRLVVGGFERVFELNRNFRNEGVSIRHNP-EFTMLEYYQAYADYHDLMDNTEE 291

Query: 256 VLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           +LR +  +      V            F RI   +AI +YG ++  ++  +
Sbjct: 292 LLRKLALDILGTTIVPYGDLKFDFGKPFERITMHEAILKYGAEQGIVKEDL 342



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 63/156 (40%), Gaps = 10/156 (6%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLL 475
             +AQ+LGI     +    +++   +E   E   I      F M      S     ND  
Sbjct: 349 VAVAQKLGIEVQKSWGLGSLVNA-IFEEVAEHHLIQPT---FLMAHPAEISPLARRNDEN 404

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQC 531
                +++L   G EI +G    + +E   + F     +KE  ++           A + 
Sbjct: 405 PDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVTALEH 464

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 465 GLPPTAGEGLGIDRLAMLFANANSIRDVILFPAMKT 500


>gi|307243777|ref|ZP_07525911.1| lysine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492853|gb|EFM64872.1| lysine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 636

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 62/308 (20%), Positives = 130/308 (42%), Gaps = 24/308 (7%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +H   ++     S  G  V L+G +   R  G   F+ ++D  G  Q     D    +  
Sbjct: 43  SHHSNEVVDNYDSLEGQKVSLAGRIMSKRIMGKASFMHLQDQNGRIQAYVKRDDIGVDEY 102

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  ++  +  I G+      E       T ++ +  +K+ +LS + +  LP         
Sbjct: 103 KLFKTYDIGDIVGI------EGFVFKTKTEEVSVHVEKLVLLSKSLQ-VLPEKYHGLKDV 155

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
            +R++ R++DL  +   K+    RT+ + ++R  +    F+E  TPIL T +    AR F
Sbjct: 156 DLRYRQRYVDLIVNPEVKDAFLTRTKALKALRSYLDERGFLEVETPILNTIAGGANARPF 215

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + Y + L+  GFD+ +++   FR+E       P E+  +++ 
Sbjct: 216 ITHHNTLDIPMY-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDMKHNP-EYTAIELY 273

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDK 290
            ++ +  D+++  ENV+  + +  +    ++           + R+  ++ ++ Y G D 
Sbjct: 274 QAYADYKDMMDITENVISHMAQVATGSMKINYQGTEIDFTPPWKRMTMEECVKEYAGVDF 333

Query: 291 PDLRNPII 298
            ++     
Sbjct: 334 SEINTDEE 341



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 63/154 (40%), Gaps = 17/154 (11%)

Query: 442 FYEWNEEEKKIDFA---HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   E+K I      H+P  +    +      D    +  +++   N +E+A+     
Sbjct: 366 FFEEFGEDKLIQPTFITHHPVEVSP--LAKRNVEDPR--RTDRFEAFANKWELANAFSEL 421

Query: 499 HMS-------EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
           +         E  ++           ++  F     A + G+PP GG+  GIDR++MLL 
Sbjct: 422 NDPIDQRGRFEDQVRKRELGDDEACEMDEDF---INALEVGLPPTGGLGIGIDRVIMLLT 478

Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
            +  +R+V LFP  +   D    +      ++++
Sbjct: 479 DSTTIRDVLLFPTMKPLRDGSSEADGETEKKEVK 512


>gi|331655961|ref|ZP_08356949.1| lysine--tRNA ligase [Escherichia coli M718]
 gi|331046315|gb|EGI18405.1| lysine--tRNA ligase [Escherichia coli M718]
          Length = 505

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVIRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 426 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|323156681|gb|EFZ42822.1| lysyl-tRNA synthetase [Escherichia coli EPECa14]
          Length = 403

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383


>gi|257064642|ref|YP_003144314.1| lysyl-tRNA synthetase (class II) [Slackia heliotrinireducens DSM
           20476]
 gi|256792295|gb|ACV22965.1| lysyl-tRNA synthetase (class II) [Slackia heliotrinireducens DSM
           20476]
          Length = 499

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 99/576 (17%), Positives = 180/576 (31%), Gaps = 135/576 (23%)

Query: 6   THSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           TH   +L                V+++G +  +R  G I F+ +RD     Q+    +  
Sbjct: 41  THHVAELEEKYADLEDGAVTEDVVKVAGRIMAIRNQGKIAFVVVRDATADIQLFCRINVL 100

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E  + V++  V    G      AE        GQ+ +S  ++ +LS +   PLP    
Sbjct: 101 GEEAYEEVKNLDVGDWVG------AEGTVIRTRRGQLSVSPTEVRLLSKSIR-PLPEKFH 153

Query: 118 REYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPE 175
               +  R++ R++DL     + +   KR +I+ ++R  M  + F    TP+L +     
Sbjct: 154 GLADKETRYRQRYVDLVMNPDVRETFEKRFKILAAIRRYMEGQGFYAVETPMLHSIMGGA 213

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            A+ F+         FY L  A +   + L+  GF+R +++                   
Sbjct: 214 NAKPFVTHHNALDIDFY-LRIATELPLKRLLVGGFERVYEMGRI---------------- 256

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
                                       F N      +       +A + Y         
Sbjct: 257 ----------------------------FRNEGMDPYHNPEFTTIEAYQAYSD------- 281

Query: 296 PIIMHNVTEHFVHSEFRVFSKIL-SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354
              +  + E           +   ++   Y+  A+   G   +R  CD   E+A  +   
Sbjct: 282 ---LDGMKELTQGMIQFAAQEACGTLQIEYQGQAVDLSGEWESRTMCDLATEYAGEE--- 335

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
                               V+         AI  R      D      G          
Sbjct: 336 --------------------VSFDRTREELAAIAERGGAHVED----AWGK--------G 363

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
              + I +    +  +  +  ++ + P               +P          L     
Sbjct: 364 KIISEIFEAY--VEDHLIQPIFVTEHPL------------EISPLASKLPDNPELTA--- 406

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++L   G E A+     +      + F+    +K   +           RA +
Sbjct: 407 ------RFELFICGHEYANAFTELNDPVDQRERFAAQMQAKVQGDEEAMGYDEDYIRALE 460

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GMPP GG+  GIDR+VMLL  +  +R+V LFP  +
Sbjct: 461 YGMPPAGGVGLGIDRLVMLLTDSATIRDVLLFPHMR 496


>gi|270307940|ref|YP_003329998.1| lysyl-tRNA synthetase (class II) [Dehalococcoides sp. VS]
 gi|270153832|gb|ACZ61670.1| lysyl-tRNA synthetase (class II) [Dehalococcoides sp. VS]
          Length = 498

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/287 (25%), Positives = 133/287 (46%), Gaps = 21/287 (7%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             +R++G +   R  G I F+DIRD  G  Q+    +       + ++   +    G   
Sbjct: 54  ETLRIAGRIMTRRDMGKISFMDIRDGSGKIQIFCRQNDMDEASIELLKDLDLGDFIG--- 110

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
              AE       TG+  L+A +I +LS +  LPLP           R++ R+LDL  +  
Sbjct: 111 ---AEGSLMRTRTGEPSLAATRITMLSKSL-LPLPEKWHGLQDVEKRYRQRYLDLISNAD 166

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQ 196
            +     R+R+I+++RC M A+ F+E  TP+L   +    AR F+   +     FY +  
Sbjct: 167 ARQTFLTRSRVISAIRCFMSAKEFLEVETPVLQPEAGGALARPFITHHQALDCDFY-MRI 225

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  GFDR ++I   FR+E   +   P EF  ++   ++ +  D+++ +E +
Sbjct: 226 ALELHLKRLIVGGFDRVYEIGRIFRNEGVSTRHNP-EFTMMESYQAYADYKDVMDFLEEM 284

Query: 257 LRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY-GTDKPDL 293
           +  V +E S G            +  + R+   DA+++Y G D  D 
Sbjct: 285 VSSVVKEISGGYTVPFGDITLDFTPPWPRLTIRDAVKQYAGIDFFDF 331



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 49/123 (39%), Gaps = 9/123 (7%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM-----LQAFSNV 511
           +P  M    +   K  D       +++ +C   EIA+     +           Q     
Sbjct: 379 HPVAMSP--LAKQKPEDPR--LTERFEAICANMEIANAFSELNDPVEQRARFKEQLEKRN 434

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            +  E  E+       A   GMPP GG+  GIDR+VMLL    ++REV LFP  ++  D 
Sbjct: 435 QLRTEEFESIDEDFLAALAYGMPPTGGLGVGIDRLVMLLTNHDSIREVILFPALKDREDT 494

Query: 572 LMG 574
              
Sbjct: 495 KTQ 497


>gi|269837140|ref|YP_003319368.1| lysyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786403|gb|ACZ38546.1| lysyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 513

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 83/445 (18%), Positives = 159/445 (35%), Gaps = 39/445 (8%)

Query: 2   HRYRTHSCGD-----------LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           H +RTH+  +           L        + ++G V  VR  G  +F  IRD  G  QV
Sbjct: 29  HSHRTHTAEEALARFTEIEPTLDTEHDPETITVAGRVTAVRDMGKSVFAHIRDGSGAIQV 88

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               +    +     +    L          AE       TG++ +  +   +L+ A   
Sbjct: 89  YLRRNVVGDDALAHFKRFIDLGD-----FIEAEGNLFRTRTGEVTVEVKAFRLLAKA-IN 142

Query: 111 PLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           P P           R++ R+ DL   +   +  V R   I ++R  +    F+E  TP+L
Sbjct: 143 PPPEKWHGLQDVETRYRQRYADLMANEETRRIFVIRANAIRAIRRFLDERGFLEVETPVL 202

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A              + L  A + Y + L+  G++R ++IA  FR+E   + R
Sbjct: 203 QPLYGGAAARPFTTYYNALDQTFYLRIADELYLKRLLVGGYERVYEIAKDFRNEGIDA-R 261

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
              EF  L+  M++ +  D++  +E +   V E+      ++              Y   
Sbjct: 262 HSPEFTMLEFYMAYADYHDVMELVEEMFVYVAEQALGTTKLT--------------YAGH 307

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
           + DL  P     + +  + +    + ++      YE              +   ++E  +
Sbjct: 308 EIDLTPPWPRVPLRQALIDATGIDYREVTDQRELYERAKALGADVEPTTVWPRIIDELMK 367

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR---LDMQDGDSCFFIAGDP 406
           +  +P L    + +D    +    P+AK      + A R +     M+ G++   +    
Sbjct: 368 TFVRPNLIQPTFLVDYPVEL---SPLAKRSPEDPSIAERFQPFIAGMEMGNAFTELNDPM 424

Query: 407 LKFCSFAADARNHIAQELGIINCNC 431
            +   F A AR+  A +L  +  + 
Sbjct: 425 DQLERFLAQARDRAAGDLEAMPIDD 449



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 46/117 (39%), Gaps = 5/117 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
           K +      A ++     G E+ +     +     L+ F      +   +          
Sbjct: 392 KRSPEDPSIAERFQPFIAGMEMGNAFTELNDPMDQLERFLAQARDRAAGDLEAMPIDDDF 451

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL-LMGSPSTVSV 581
             A   GMPP GG   GIDR+ MLL   +N+REV LFP  ++     L G P+  + 
Sbjct: 452 INALMYGMPPTGGFGLGIDRLTMLLTDQQNIREVILFPHLRSKPTPILAGLPTPSTE 508


>gi|113461618|ref|YP_719687.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|112823661|gb|ABI25750.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 502

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 66/291 (22%), Positives = 125/291 (42%), Gaps = 19/291 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+++G +   R  G   F+ ++D  G  Q+    D+    +       W L   G +
Sbjct: 60  GIEVKVAGRIMTRRVMGKATFITLQDMSGKIQLYVARDNLAEGVYTDDVGNWDL---GDI 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +            T ++ + A ++ +L+ A   PLP        +  R++ R+LDL  + 
Sbjct: 117 VGVKGTLF--KTKTNELTIRATEVHLLTKALR-PLPNKFHGLSDQETRYRQRYLDLIANE 173

Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
              +  + R+++I  +R   I++ F+E  TP+L        AR F+          Y L 
Sbjct: 174 DSRRTFIIRSKVIAGIREYFISKGFMEVETPMLQIIPGGASARPFITHHNALDVDMY-LR 232

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF+R F++   FR+E       P EF  L+   ++ +  D+++  E 
Sbjct: 233 IAPELYLKRLVVGGFERVFELNRNFRNEGVSIRHNP-EFTMLEYYQAYADYHDLMDNTEE 291

Query: 256 VLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           +LR +  +      V            F RI   +AI +YG ++  ++  +
Sbjct: 292 LLRKLALDILGTTIVPYGDLKFDFGKPFERITMHEAILKYGAEQGIVKEDL 342



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 12/158 (7%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLL 475
             IAQ+LGI     +    +++   +E   E   I      F M      S     ND  
Sbjct: 349 VAIAQKLGIEVQKSWGLGSLVNA-IFEEVAEHHLIQPT---FLMAHPAEISPLARRNDEN 404

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQC 531
                +++L   G EI +G    + +E   + F     +KE  ++           A + 
Sbjct: 405 PDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVTALEH 464

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP--MSQN 567
           G+PP  G   GIDR+ ML   A ++R+V LFP   ++N
Sbjct: 465 GLPPTAGEGLGIDRLAMLFANANSIRDVILFPAMKTKN 502


>gi|269797573|ref|YP_003311473.1| lysyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094202|gb|ACZ24193.1| lysyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 506

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 20/286 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +  +R HG   F +IRD  G  QV    D    E  K V+   +  I G+ 
Sbjct: 57  GQPVVIAGRLMTIRSHGKTAFANIRDKSGDIQVYFRKDVLGEEAYKYVKMLDIGDIIGV- 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                E       TG++ +   K+ +LS +   PLP          +R++ R++DL  + 
Sbjct: 116 -----EGHVFKTHTGEVTIKVNKLTLLSKSLR-PLPEKWHGLKDTELRYRQRYVDLIVNP 169

Query: 138 LHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
             ++  VKR++I+  +R  M+ + F+E  TP++ A      AR F+          Y + 
Sbjct: 170 EVRDTFVKRSQIVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALDIDIY-MR 228

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G DR F++  CFR+E    +R   EF  ++   ++ + +D +   EN
Sbjct: 229 IAPELYLKRLIVGGMDRVFEMNRCFRNEGID-NRHNPEFTTIESYQAYGDVEDAIRLTEN 287

Query: 256 VLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           ++    +E      ++           + RI   + +++Y  +  D
Sbjct: 288 LVSYCAQEVLGTQEITYQGTEINLTPPWNRITMAEGVKKYTGEDFD 333



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 10/112 (8%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++    G E+A+G    +      Q F +    +E  ++           A + G+P
Sbjct: 401 TERFEAFIYGRELANGFSELNDPIDQKQRFLDQLKEREAGDDEAHRMDEDFVTALEYGLP 460

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           P  G+  GIDR+VM L  + ++R+V LFP+ +        +P  +  E+  E
Sbjct: 461 PTAGLGVGIDRLVMFLTDSASIRDVLLFPLMKP------EAPKHIEAEEAAE 506


>gi|52550554|gb|AAU84403.1| aspartyl-tRNA synthetase [uncultured archaeon GZfos9E5]
          Length = 439

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 94/358 (26%), Positives = 162/358 (45%), Gaps = 30/358 (8%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAK 63
               ++   + G  V ++GWVH  R  GG+ FL +RD  G  QV  N    +   F   K
Sbjct: 9   KYSTEITADNDGETVCIAGWVHEKRDLGGVFFLIVRDFGGFAQVTLNRKKAEKELFARVK 68

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V  E V+ I+G V S S       II  Q+E+ ++  ++L      PL    +      
Sbjct: 69  KVPRESVVAIEGKVKSESKAPNGYEIIPNQMEVLSEASQVL------PLDTTEKVGAELD 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R   RF+DLR +   +  + R+R++ ++R  +    FIE +TP + +++ EG       
Sbjct: 123 TRLDARFMDLRIERTKQIFIIRSRVLKAIRGFLDEREFIEINTPKIVSAATEGGTALFPI 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           S   + +F  L Q+PQ YKQ+LMASGFDR ++IAP FR E+  + +   E   +D+E++F
Sbjct: 183 SYFEREAF--LNQSPQLYKQMLMASGFDRVYEIAPIFRAEEHDTTKHLNEATSMDIEVAF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNG------------NTVSNNFLRICYDDAIRRYGTDKP 291
           V   +++  +E ++  V+ +  +                   F RI Y++AI        
Sbjct: 241 VSDMEVMKILEELIAFVYSKIVDYPGLAKLNLQLPLEVPKTPFRRITYEEAIESLSEAGE 300

Query: 292 DLRNPIIMHNVTEH----FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
           ++     +    EH     +   + +     ++ P Y   A PA     ++  C+  +
Sbjct: 301 EIEWGEDLGTSAEHTLGAMIGELYFITDWPCAIKPFY---AQPANAEAKSKDTCNAFD 355



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 27/176 (15%)

Query: 401 FIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEEKKIDFA 455
               + ++  S A +      ++LG    +       E  +I D+P             A
Sbjct: 286 ITYEEAIESLSEAGE-EIEWGEDLGTSAEHTLGAMIGELYFITDWP------------CA 332

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
             PF       E+   +         +DL+    E+ASG  R H  E++ Q   + G+S 
Sbjct: 333 IKPFYAQPANAEAKSKD-----TCNAFDLMHPRVELASGSQRVHSYELLKQKIESKGLSA 387

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
               + F      F+ GMPPH G   GIDR++M +L  +N+REV LFP  +     
Sbjct: 388 ----DSFEFYLDTFRFGMPPHAGWGLGIDRLLMCMLEIENIREVVLFPRDRRRLAP 439


>gi|312965748|ref|ZP_07779977.1| lysyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312289722|gb|EFR17613.1| lysyl-tRNA synthetase [Escherichia coli 2362-75]
          Length = 505

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGIMVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +         P       + ND+      +++    G EI +G    + +E   + F
Sbjct: 381 EAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAERF 440

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K   ++           A + G+PP  G+  GIDR++ML   +  +R+V LFP 
Sbjct: 441 QEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFPA 500

Query: 565 SQ 566
            +
Sbjct: 501 MR 502


>gi|88812906|ref|ZP_01128150.1| lysyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88789828|gb|EAR20951.1| lysyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 506

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 13/278 (4%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           +  +L  + V   V+++G +   R  G   F  ++D  G  Q+    D    E+ +  +S
Sbjct: 56  TTEELEEAAV--PVKVAGRMIGKRVMGKASFAHLQDMSGRIQLFLRRDDLSSEVYQQFKS 113

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             V  I G      AE        G++ +    I +L+ +   PLP        +  R++
Sbjct: 114 WDVGDIIG------AEGHVYKTQAGELSVRVSAIRLLTKSLR-PLPEKYHGLADQEARYR 166

Query: 128 YRFLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R++DL  +    +  + R RII S+R       F+E  TP++        AR F+    
Sbjct: 167 QRYVDLIVNENARRTFILRGRIIQSIRAAFNEWGFLEVETPMMQPIPGGAAARPFITHHN 226

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ Y + L+  GF++ ++I   FR+E   +   P EF  L+   ++ +
Sbjct: 227 ALDVDLY-LRIAPELYLKRLVVGGFEKVYEINRNFRNEGVSTRHNP-EFTMLEFYQAYAD 284

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
             D+++  E +LR +  E      +      I      
Sbjct: 285 YHDLMDLTEELLRRLAAEVLGTQRLHYQGEAIDLHRPF 322



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 5/133 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E  ++         P+      +  D       +++L+  G EIA+G    + ++
Sbjct: 374 FEKTTE-HRLRQPTFVTEYPREVSPLARPKDEDPFVTERFELIIGGREIANGFSELNDAD 432

Query: 503 VMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F      KE  +           RA + G+PP  G   GIDR+VML   A ++R+
Sbjct: 433 DQAERFRAQVAGKEAGDEEAMFYDADFIRALEYGLPPTAGEGIGIDRLVMLFTDAPSIRD 492

Query: 559 VSLFPMSQNFCDL 571
           V LFP  +   + 
Sbjct: 493 VLLFPAMRPSAEP 505


>gi|145637034|ref|ZP_01792697.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145269688|gb|EDK09628.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 502

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 70/299 (23%), Positives = 132/299 (44%), Gaps = 20/299 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G++ + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W
Sbjct: 54  GEI-LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTW 112

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L   G ++            T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 113 DL---GDIVGVKGTLF--KTKTDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +    +  + R++++  +R   I++ F+E  TP+L        AR F+      
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNAL 226

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  
Sbjct: 227 DVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYH 284

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           D+++  E +LR +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 285 DLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATIKYGADKGIVKEDL 343



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 12/180 (6%)

Query: 396 GDSCFFIAGDPLKFCSFAADA-RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            D+      D         D  R    A+ LGI     +    I++   +E   E   I 
Sbjct: 326 HDATIKYGADKGIVKEDLYDFNRAKATAERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQ 384

Query: 454 FAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                F M      S     ND       +++L   G EI +G    + +E   + F   
Sbjct: 385 PT---FLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQ 441

Query: 512 GISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 442 VAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|312901060|ref|ZP_07760349.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|311291806|gb|EFQ70362.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0470]
          Length = 467

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 132/354 (37%), Gaps = 28/354 (7%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            S++ + V ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSAELHEQYDNHTKEELSEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G     + + +  N  TG++ + AQ I +L+ A   PLP 
Sbjct: 100 DQVGDEAYELFKHADL----GDFFGVTGQVMKTN--TGEVTVKAQTITLLTKALR-PLPD 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +       +KR++II+ +R  +    ++E  TP+L   +
Sbjct: 153 KYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETPVLHNEA 212

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 213 GGAAARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP- 270

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ +  D+++  E ++R   E+             I YD      G+    
Sbjct: 271 EFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTD-------ITYDGQAVDLGSPFKR 323

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           L     +   T      E  +                    G     F +   E
Sbjct: 324 LHMVDAVKEQTGVDFWQEMTIEEARALAKEHNVEITDAMTVGHIINEFFETFVE 377



 Score = 37.4 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 4/91 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +      +  P       K N        +++L   G E A+     +      + F
Sbjct: 377 EDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRERF 436

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPP 535
                 +E   +           A + G+PP
Sbjct: 437 EEQEKEREQGNDEAHGVDEDFIEALEYGLPP 467


>gi|238921195|ref|YP_002934710.1| lysyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259511526|sp|C5BAR6|SYK_EDWI9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238870764|gb|ACR70475.1| lysyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 505

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 80/355 (22%), Positives = 143/355 (40%), Gaps = 31/355 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y   S  +L   +V   V ++G +   R  G   F+ ++D  G  Q+    D    ++  
Sbjct: 53  YDGKSKEELEALNV--EVSVAGRMMTRRIMGKASFVTLQDMGGRIQLYVARDDLKDDVYS 110

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++            TG++ +    I +L+ A   PLP        + 
Sbjct: 111 EQFKKWDL---GDIIGARGTLF--RTQTGELSIHCHSIHLLTKALR-PLPDKFHGLSDQE 164

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL  +   +   + R++I+ ++R  M+ + F+E  TP++        AR F+
Sbjct: 165 TRYRQRYLDLIANESSRETFRTRSKILAAIRNFMVNKGFMEVETPMMQVIPGGASARPFI 224

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M
Sbjct: 225 THHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYM 282

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E + R + ++                  ++ +YG    D   P I  +
Sbjct: 283 AYADYKDLIVLTEELFRTISQDVLG--------------SSVVQYGDQTFDFGKPFIKMS 328

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEWARSQ 351
           + E   H    + S  L         A        K  G  R  C+  +E A SQ
Sbjct: 329 MKEAICHYRPDIASADLDDMDKACKIAESLGIKIEKSWGLGRVQCEIFDETAESQ 383



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 68/195 (34%), Gaps = 18/195 (9%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE--LGIINCNCFEFC 435
                   +++  +     D       D  K C  A      I +   LG + C  F+  
Sbjct: 320 FGKPFIKMSMKEAICHYRPDIASADLDDMDKACKIAESLGIKIEKSWGLGRVQCEIFD-- 377

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
                        E ++         P       + ND       +++    G EI +G 
Sbjct: 378 ----------ETAESQLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGF 427

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLL 551
              + +E   + F +   +K+  ++           A + G+PP  G+  GIDR++ML  
Sbjct: 428 SELNDAEDQAERFQDQVKAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGVGIDRMMMLFT 487

Query: 552 GAKNVREVSLFPMSQ 566
            +  +R+V LFP  +
Sbjct: 488 NSHTIRDVILFPAMR 502


>gi|157158511|ref|YP_001465628.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
 gi|170021873|ref|YP_001726827.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|300924404|ref|ZP_07140378.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|301330484|ref|ZP_07223100.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|312974064|ref|ZP_07788235.1| lysyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|157080541|gb|ABV20249.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
 gi|169756801|gb|ACA79500.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|300419399|gb|EFK02710.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300843567|gb|EFK71327.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|310331598|gb|EFP98854.1| lysyl-tRNA synthetase [Escherichia coli 1827-70]
          Length = 505

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHEEFDAKNNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 426 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|1311301|pdb|1LYL|A Chain A, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With
           Lysine
 gi|1311303|pdb|1LYL|B Chain B, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With
           Lysine
 gi|1311305|pdb|1LYL|C Chain C, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With
           Lysine
 gi|9954996|pdb|1E1O|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal For, Complexed With
           L
 gi|9954997|pdb|1E1T|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal Form Complexed With
           T Lysyl_adenylate Intermediate
 gi|9954998|pdb|1E22|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal Form Complexed With
           Lysine And The Non-Hydrolysable Atp Analogue Amp-Pcp
 gi|9954999|pdb|1E24|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal Form Complexed With
           Lysine And Atp And Mn2+
          Length = 504

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 41  RDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 100

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 101 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 154

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 155 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 214

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 215 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 272

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 273 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 318

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 319 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEV 378

Query: 348 ARSQ 351
           A + 
Sbjct: 379 AEAH 382



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 322 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 376

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 377 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 424

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 425 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 484

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 485 FTNSHTIRDVILFPAMR 501


>gi|315165840|gb|EFU09857.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1302]
          Length = 498

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 66/318 (20%), Positives = 129/318 (40%), Gaps = 32/318 (10%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            S++ + V ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSAELHEQYDNHTKEELSEMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G     + + +  N  TG++ + AQ I +L+ A   PLP 
Sbjct: 100 DQVGDEAYELFKHADL----GDFFGVTGQVMKTN--TGEVTVKAQTITLLTKALR-PLPD 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +       +KR++II+ +R  +    ++E  TP+L   +
Sbjct: 153 KYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETPVLHNEA 212

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 213 GGAAARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP- 270

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  L+   ++ +  D+++  E ++R   E+      +            F R+   DA+
Sbjct: 271 EFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDIKYDGQAVDLGSPFKRLHMVDAV 330

Query: 284 RRYGTDKPDLRNPIIMHN 301
           +       D    + +  
Sbjct: 331 KE--QTGVDFWQEMTIEE 346



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +      +  P       K N        +++L   G E A+     +        F
Sbjct: 377 EDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRDRF 436

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +E   +           A + G+PP GG+  GIDR+VMLL  A+++R+V LFP 
Sbjct: 437 EEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPT 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|193067810|ref|ZP_03048776.1| lysyl-tRNA synthetase LysU [Escherichia coli E110019]
 gi|192958785|gb|EDV89222.1| lysyl-tRNA synthetase LysU [Escherichia coli E110019]
          Length = 505

 Score =  211 bits (538), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHEEFDAKNNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 426 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|16273131|ref|NP_439367.1| lysyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|1174526|sp|P43825|SYK_HAEIN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1574141|gb|AAC22865.1| lysyl-tRNA synthetase (lysU) [Haemophilus influenzae Rd KW20]
          Length = 502

 Score =  211 bits (538), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 70/299 (23%), Positives = 132/299 (44%), Gaps = 20/299 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G++ + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W
Sbjct: 54  GEI-LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTW 112

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L   G ++            T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 113 DL---GDIVGIKGTLF--KTKTDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +    +  + R++++  +R   I++ F+E  TP+L        AR F+      
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNAL 226

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  
Sbjct: 227 DVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYH 284

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           D+++  E +LR +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 285 DLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATIKYGADKGIVKEDL 343



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 67/178 (37%), Gaps = 8/178 (4%)

Query: 396 GDSCFFIAGDPLKFCSFAADA-RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            D+      D         D  R    A+ LGI     +    I++   +E   E   I 
Sbjct: 326 HDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQ 384

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
                 +  +    + + ND       +++L   G EI +G    + +E   + F     
Sbjct: 385 PTFLNGSPAEISPLARR-NDENPEVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQVA 443

Query: 514 SKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 444 AKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|269140267|ref|YP_003296968.1| lysyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267985928|gb|ACY85757.1| lysyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304560095|gb|ADM42759.1| Lysyl-tRNA synthetase class II [Edwardsiella tarda FL6-60]
          Length = 505

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 80/355 (22%), Positives = 143/355 (40%), Gaps = 31/355 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y   S  +L   +V   V ++G +   R  G   F+ ++D  G  Q+    D    ++  
Sbjct: 53  YDGKSKEELEALNV--EVSVAGRMMTRRIMGKASFVTLQDMGGRIQLYVARDDLKDDVYS 110

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++            TG++ +    I +L+ A   PLP        + 
Sbjct: 111 EQFKKWDL---GDIIGARGTLF--RTQTGELSIHCHSIHLLTKALR-PLPDKFHGLSDQE 164

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL  +   +   + R++I+ ++R  M+ + F+E  TP++        AR F+
Sbjct: 165 TRYRQRYLDLIANESSRETFRTRSKILAAIRNFMVNKGFMEVETPMMQVIPGGASARPFI 224

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M
Sbjct: 225 THHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYM 282

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E + R + ++                  ++ +YG    D   P I  +
Sbjct: 283 AYADYKDLIVLTEELFRTISQDVLG--------------SSVVQYGDQTFDFGKPFIKMS 328

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEWARSQ 351
           + E   H    + S  L         A        K  G  R  C+  +E A SQ
Sbjct: 329 MKEAICHYRPDIASADLDDMEKACKIAESLGIKIEKSWGLGRVQCEIFDETAESQ 383



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 68/195 (34%), Gaps = 18/195 (9%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE--LGIINCNCFEFC 435
                   +++  +     D       D  K C  A      I +   LG + C  F+  
Sbjct: 320 FGKPFIKMSMKEAICHYRPDIASADLDDMEKACKIAESLGIKIEKSWGLGRVQCEIFD-- 377

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
                        E ++         P       + ND       +++    G EI +G 
Sbjct: 378 ----------ETAESQLIQPTFITEYPAEVSPLARRNDENPFITDRFEFFIGGREIGNGF 427

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLL 551
              + +E   + F +   +K+  ++           A + G+PP  G+  GIDR++ML  
Sbjct: 428 SELNDAEDQAERFLDQVKAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGVGIDRMMMLFT 487

Query: 552 GAKNVREVSLFPMSQ 566
            +  +R+V LFP  +
Sbjct: 488 NSHTIRDVILFPAMR 502


>gi|282850021|ref|ZP_06259403.1| lysine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282580210|gb|EFB85611.1| lysine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 505

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 20/286 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +  +R HG   F +IRD  G  QV    D    E  K V+   +  I G+ 
Sbjct: 57  GQPVVIAGRLMTIRSHGKTAFANIRDKSGDIQVYFRKDVLGEEAYKYVKMLDIGDIIGI- 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                E       TG++ +   K+ +LS +   PLP          +R++ R++DL  + 
Sbjct: 116 -----EGHVFKTHTGEVTIKVNKLTLLSKSLR-PLPEKWHGLKDTELRYRQRYVDLIVNP 169

Query: 138 LHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
             ++  VKR++I+  +R  M+ + F+E  TP++ A      AR F+          Y + 
Sbjct: 170 EVRDTFVKRSQIVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALDIDIY-MR 228

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G DR F++  CFR+E    +R   EF  ++   ++ + +D +   EN
Sbjct: 229 IAPELYLKRLIVGGMDRVFEMNRCFRNEGID-NRHNPEFTTIESYQAYGDVEDAIRLTEN 287

Query: 256 VLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           ++    +E      ++           + RI   + +++Y  +  D
Sbjct: 288 LVSYCAQEVLGTQEITYQGTEINLTPPWNRITMAEGVKKYTGEDFD 333



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 4/92 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++    G E+A+G    +      Q F +    +E  ++           A + G+P
Sbjct: 401 TERFEAFIYGRELANGFSELNDPIDQKQRFLDQLKEREAGDDEAHRMDEDFVTALEYGLP 460

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P  G+  GIDR+VM L  + ++R+V LFP+ +
Sbjct: 461 PTAGLGVGIDRLVMFLTDSASIRDVLLFPLMK 492


>gi|307129434|ref|YP_003881450.1| Lysyl-tRNA synthetase (class II) [Dickeya dadantii 3937]
 gi|306526963|gb|ADM96893.1| Lysyl-tRNA synthetase (class II) [Dickeya dadantii 3937]
          Length = 505

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 70/345 (20%), Positives = 134/345 (38%), Gaps = 29/345 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +G  V ++G +   R  G   F+ ++D  G  Q+  + D     +      +W L  
Sbjct: 61  LEALGLEVNVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDIVGARGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   ++  + R++I+  +R  M+  +F+E  TP++        AR F+          
Sbjct: 175 IANEESRHTFRVRSQIMAGIRQFMVGRDFMEVETPMMQVIPGGAAARPFITHHNALDIDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E++ R + ++                     +YG    D   P     + E       
Sbjct: 293 LTESLFRTLAQDVLGATE--------------VQYGDQVFDFGKPFEKLTMREAIKKYRP 338

Query: 312 RVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEWARSQ 351
                 L      +  A        K  G  R   +   E A + 
Sbjct: 339 ETNMADLDSFDAAKAIAESIGIKVEKSWGLGRIVTEIFEETAEAH 383



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 70/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   +M D DS      D  K  + +   +   +  LG I    FE
Sbjct: 323 PFEKLTMREAIKKYRPETNMADLDSF-----DAAKAIAESIGIKVEKSWGLGRIVTEIFE 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND       +++    G EI +
Sbjct: 378 ------------ETAEAHLIQPTFITEYPAEVSPLARRNDQNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F +   +K+  ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRLVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|224475661|ref|YP_002633267.1| lysyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222420268|emb|CAL27082.1| lysyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 497

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 68/363 (18%), Positives = 139/363 (38%), Gaps = 26/363 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  I+D  G  Q+    D    E     +   +  I G+    
Sbjct: 63  VAIAGRLMTKRGKGKAGFAHIQDLSGQIQIYVRKDQVGEEQFAIWKMADLGDIVGI---- 118

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E +     TG++ + A+   +LS +   PLP           R++ R+LDL  +    
Sbjct: 119 --EGVMFKTNTGELSVKAKSFTLLSKSLR-PLPDKFHGLQDVEQRYRQRYLDLITNQEST 175

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
                R++II  MR  + ++ F+E  TP++   +   A    V       +   +  A +
Sbjct: 176 QTFINRSKIIQEMRNYLNSKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIE 235

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++  E  +R 
Sbjct: 236 LHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADFHDIMDLTEGTIRH 294

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           + ++                  A+  YG  + DL +P    ++ +    +    F  + S
Sbjct: 295 ISKKVLG--------------TAVVPYGEYEVDLDSPWKRVHIVDAVKEATGVNFFDVKS 340

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
                E+          +  +   +NE+   + +  L    +     G+   + P+AK  
Sbjct: 341 DEEARELAKEHGIEITDHMTYGHILNEFFEQKVEETLIQPTFVY---GHPIEISPLAKKN 397

Query: 380 NIV 382
              
Sbjct: 398 PED 400



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 12/157 (7%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDL 474
             +A+E GI   +   +  I++  F+E   EE  I       +P  +    +      D 
Sbjct: 345 RELAKEHGIEITDHMTYGHILN-EFFEQKVEETLIQPTFVYGHPIEISP--LAKKNPEDP 401

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQ 530
                 +++L   G E A+     +      + F      KE               A +
Sbjct: 402 R--FTDRFELFIVGREHANAFTELNDPIDQRERFEAQLKEKEQGNDEAHEMDEDYIEALE 459

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            GMPP GG+  GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 460 YGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPYMRQ 496


>gi|325678473|ref|ZP_08158089.1| lysine--tRNA ligase [Ruminococcus albus 8]
 gi|324109841|gb|EGC04041.1| lysine--tRNA ligase [Ruminococcus albus 8]
          Length = 525

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 60/333 (18%), Positives = 126/333 (37%), Gaps = 22/333 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F+D+RD  G  Q+    +    E   +          G ++ 
Sbjct: 88  RVSIAGRIMSKRMMGKASFMDLRDKSGKVQLYVRMNEVGKE---AFDRYVKKGDIGDIVG 144

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTL 138
            +       +  G+I + A+   +LS   + PLP        +  R++ R+ DL     +
Sbjct: 145 VTGFVFRTRM--GEISVHAESFTLLSKNLQ-PLPEKWHGLKDQDTRYRQRYTDLICNPEV 201

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
               +KR++II+++R  +    F+E  TP+L +++   A                L  + 
Sbjct: 202 KDTFIKRSKIISTIRRYLDERGFMEVETPMLVSNAGGAAARPFETHYNALDEDVKLRISL 261

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   +++  E++ R
Sbjct: 262 ELYLKRLIVGGLERVYEIGRVFRNEGVDARHNP-EFTLMELYQAYTDYHGMMDLTEDMFR 320

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
            + +    G T+               YG  + DL  P     + +         F++I 
Sbjct: 321 HLAQTVCGGTTIP--------------YGEHEIDLGKPFERLTMIDAVKKYAGVDFNEIK 366

Query: 319 SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           +      +               D +N +    
Sbjct: 367 TTEEAKALAKEKHIEFEDRHKRGDILNLFFEEY 399



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 60/160 (37%), Gaps = 30/160 (18%)

Query: 417 RNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           R+     L +     +  +  +  +IMD P               +P T  +        
Sbjct: 385 RHKRGDILNLFFEEYVEEHLIQPTFIMDHP------------IEISPLTKKKPDAPDY-- 430

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYR 527
                    +++L  NG+E+ +     +      + F     +    +           R
Sbjct: 431 -------VERFELFINGWEMCNAYSELNDPIDQRERFKAQEEALSSGDEEANRTDEDFLR 483

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GGI  GIDR+VMLL  +  +R+V LFP  ++
Sbjct: 484 ALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLFPTMKS 523


>gi|157148426|ref|YP_001455745.1| lysyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|166229805|sp|A8AP96|SYK_CITK8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157085631|gb|ABV15309.1| hypothetical protein CKO_04251 [Citrobacter koseri ATCC BAA-895]
          Length = 505

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 76/364 (20%), Positives = 137/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHADFDAKENEELEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I+  +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQIMAGIRQFMVGRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V               YG +  D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVP--------------YGDEVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 71/197 (36%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +   +   +  LG I    FE
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DSAKAIAESIGIKVEKSWGLGRIVTEIFE 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F +   +KE  ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFQDQVNAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|17231563|ref|NP_488111.1| lysyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|39932230|sp|Q8YPW9|SYK_ANASP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|17133206|dbj|BAB75770.1| lysyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 561

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 64/346 (18%), Positives = 136/346 (39%), Gaps = 33/346 (9%)

Query: 2   HRYR---THSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           + YR   TH    L           +V + V ++G +   R  G + F  + D  G  Q+
Sbjct: 25  YAYRWESTHHAAQLQEKFADLTSGEEVETEVAIAGRIMARRVFGKLAFFTLEDETGTIQL 84

Query: 51  VANP----DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV 106
                   +S     A +      L   G ++             G++ +  ++  IL+ 
Sbjct: 85  YLEKNRIQESMAEIDANAFNHLKQLTDVGDILGAKGTIKRTE--KGELSVYVKEYTILTK 142

Query: 107 AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRT-RIINSMRCRMIAENFIECS 165
           +  LPLP         + R++ R++DL  +   +   +R  +I   +R  +   +F+E  
Sbjct: 143 SL-LPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRRRAQITAGIRRYLEQRDFLEIE 201

Query: 166 TPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
           TP+L + +    AR F+      +   Y L  A + + + L+  GF++ F++   FR+E 
Sbjct: 202 TPVLQSEAGGADARPFVTYHNTLEMELY-LRIATELHLKRLIVGGFEKVFELGRIFRNEG 260

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
             +   P EF  +++  ++ + +D++   E ++  V ++      ++     +      R
Sbjct: 261 ISTRHNP-EFTSIEVYQAYADYNDMMALTEGIITTVAQDVLGTLQITYQGETVDLTPPWR 319

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           R           + MH++ + +   +F  F  +       +   IP
Sbjct: 320 R-----------VTMHDLVKEYTGLDFHSFQTLEEAKSAGKNAGIP 354



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 52/153 (33%), Gaps = 30/153 (19%)

Query: 420 IAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           I + L +     +     +  +++D+P      E   +   H                  
Sbjct: 362 IGKILNLAFEEKVETKLIQPTFVIDYPV-----EISPLAKPHR----------------S 400

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQ 530
                 +++L   G E A+            +        K       +        A +
Sbjct: 401 QPGLVERFELFIVGRETANSFSELTDPIDQRERLEAQAAKKAAGDLEAQGVDEDFLTALE 460

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP GG+  GIDR+VMLL  + ++R+V  FP
Sbjct: 461 YGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFP 493


>gi|145297979|ref|YP_001140820.1| lysyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166229791|sp|A4SJK0|SYK_AERS4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|142850751|gb|ABO89072.1| lysyl tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 512

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 24/289 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V+++G +   R  G   F  ++D  G  Q+    D            +W L   G 
Sbjct: 65  LGKQVKIAGRIMTRRIMGKASFATLQDMAGKIQIYVTRDDLPEGFYNEQFKKWDL---GD 121

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-R 135
           ++         N  TG++ +    I +L+ A   PLP   +    +  R + R+LDL   
Sbjct: 122 IVGVEGTLFRTN--TGELSVHVSTIRLLTKALR-PLPEKHKGLTDQEARCRQRYLDLIAN 178

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
           +   K  + RT+++  +R     + F+E  TP++        AR F+          Y L
Sbjct: 179 EESRKTFMIRTKVVAGIRKFFNDKRFMEVETPMMQVIPGGASARPFVTHHNALDIDMY-L 237

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+R ++I   FR+E   S R   EF  ++  M++ +  D+++  E
Sbjct: 238 RIAPELYLKRLVVGGFERVYEINRNFRNEGI-SVRHNPEFTMIEFYMAYADYIDLMDLTE 296

Query: 255 NVLRGVFEEFSNGNTVSN--------------NFLRICYDDAIRRYGTD 289
            +LR + ++      +                 F R+   D+I ++  D
Sbjct: 297 ELLRTLAQDILGDTKIRYAKEGEEGLTIDFGQPFQRLTMVDSILKFNPD 345



 Score = 90.9 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 74/237 (31%), Gaps = 35/237 (14%)

Query: 340 FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC 399
             D   E  R+  Q  L     R  + G         +    +      ++ +     + 
Sbjct: 291 LMDLTEELLRTLAQDILGDTKIRYAKEGEEGLTIDFGQPFQRLTMVDSILKFNPDVTPAD 350

Query: 400 FFIAGDPLKFCSFAADARNHIAQELGIINCNCFE---------FCWIMDFPFYEWNEEEK 450
                                  ELG +    FE           +I ++P         
Sbjct: 351 LATLESAKAVAKHL-HIELMKGWELGHVITAIFEETVEHMLLQPTFITEYP--------- 400

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
               A +P             ND+      +++    G E+A+G    + +E   + F +
Sbjct: 401 ---AAVSPLARR---------NDVNPDVTDRFEFFIGGRELANGFSELNDAEDQAKRFQD 448

Query: 511 VGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               KE  ++           A + G+PP  G   GIDR+VML   +  +R+V LFP
Sbjct: 449 QVNQKEAGDDEAMFYDADFVTALEHGLPPTAGQGIGIDRLVMLFTNSHTIRDVILFP 505


>gi|15804722|ref|NP_290763.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15834365|ref|NP_313138.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|16131955|ref|NP_418553.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
           substr. MG1655]
 gi|89110851|ref|AP_004631.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
           substr. W3110]
 gi|157163595|ref|YP_001460913.1| lysyl-tRNA synthetase [Escherichia coli HS]
 gi|168748011|ref|ZP_02773033.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4113]
 gi|168755314|ref|ZP_02780321.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4401]
 gi|168760993|ref|ZP_02786000.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4501]
 gi|168766403|ref|ZP_02791410.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4486]
 gi|168774502|ref|ZP_02799509.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4196]
 gi|168780556|ref|ZP_02805563.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4076]
 gi|168784761|ref|ZP_02809768.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC869]
 gi|168798195|ref|ZP_02823202.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC508]
 gi|170083579|ref|YP_001732899.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
           substr. DH10B]
 gi|188493779|ref|ZP_03001049.1| lysyl-tRNA synthetase LysU [Escherichia coli 53638]
 gi|193063048|ref|ZP_03044140.1| lysyl-tRNA synthetase LysU [Escherichia coli E22]
 gi|194426817|ref|ZP_03059370.1| lysyl-tRNA synthetase LysU [Escherichia coli B171]
 gi|195935919|ref|ZP_03081301.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208807103|ref|ZP_03249440.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4206]
 gi|208813962|ref|ZP_03255291.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4045]
 gi|208819932|ref|ZP_03260252.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4042]
 gi|209400647|ref|YP_002273676.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4115]
 gi|209921620|ref|YP_002295704.1| lysyl-tRNA synthetase [Escherichia coli SE11]
 gi|217326188|ref|ZP_03442272.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. TW14588]
 gi|218556682|ref|YP_002389596.1| lysyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218697832|ref|YP_002405499.1| lysyl-tRNA synthetase [Escherichia coli 55989]
 gi|238903238|ref|YP_002929034.1| lysine tRNA synthetase, inducible [Escherichia coli BW2952]
 gi|254796152|ref|YP_003080989.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|260846924|ref|YP_003224702.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O103:H2
           str. 12009]
 gi|260858233|ref|YP_003232124.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O26:H11
           str. 11368]
 gi|261225251|ref|ZP_05939532.1| lysine tRNA synthetase, inducible [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255497|ref|ZP_05948030.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O157:H7
           str. FRIK966]
 gi|291285546|ref|YP_003502364.1| Lysyl-tRNA synthetase, heat inducible [Escherichia coli O55:H7 str.
           CB9615]
 gi|293417636|ref|ZP_06660258.1| lysyl-tRNA synthetase [Escherichia coli B185]
 gi|293476442|ref|ZP_06664850.1| lysyl-tRNA synthetase [Escherichia coli B088]
 gi|300818053|ref|ZP_07098266.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300821220|ref|ZP_07101368.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300906460|ref|ZP_07124156.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300920874|ref|ZP_07137270.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300947711|ref|ZP_07161878.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300954178|ref|ZP_07166643.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|301027934|ref|ZP_07191223.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301306056|ref|ZP_07212135.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301644736|ref|ZP_07244713.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|307140823|ref|ZP_07500179.1| lysyl-tRNA synthetase [Escherichia coli H736]
 gi|307312033|ref|ZP_07591670.1| lysyl-tRNA synthetase [Escherichia coli W]
 gi|331644878|ref|ZP_08345995.1| lysine--tRNA ligase [Escherichia coli H736]
 gi|331670994|ref|ZP_08371828.1| lysine--tRNA ligase [Escherichia coli TA271]
 gi|331680261|ref|ZP_08380920.1| lysine--tRNA ligase [Escherichia coli H591]
 gi|67473144|sp|P0A8N5|SYK2_ECOLI RecName: Full=Lysyl-tRNA synthetase, heat inducible; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|67473145|sp|P0A8N6|SYK2_ECO57 RecName: Full=Lysyl-tRNA synthetase, heat inducible; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|12519106|gb|AAG59329.1|AE005646_8 lysine tRNA synthetase, inducible; heat shock protein [Escherichia
           coli O157:H7 str. EDL933]
 gi|398703|emb|CAA34542.1| unnamed protein product [Escherichia coli]
 gi|536974|gb|AAA97029.1| lysyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|1790571|gb|AAC77090.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
           substr. MG1655]
 gi|13364588|dbj|BAB38534.1| lysine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|85676882|dbj|BAE78132.1| lysine tRNA synthetase, inducible [Escherichia coli str. K12
           substr. W3110]
 gi|157069275|gb|ABV08530.1| lysyl-tRNA synthetase [Escherichia coli HS]
 gi|169891414|gb|ACB05121.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
           substr. DH10B]
 gi|187769884|gb|EDU33728.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4196]
 gi|188017408|gb|EDU55530.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4113]
 gi|188488978|gb|EDU64081.1| lysyl-tRNA synthetase LysU [Escherichia coli 53638]
 gi|189001831|gb|EDU70817.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4076]
 gi|189357458|gb|EDU75877.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4401]
 gi|189364021|gb|EDU82440.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4486]
 gi|189368520|gb|EDU86936.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4501]
 gi|189375037|gb|EDU93453.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC869]
 gi|189379164|gb|EDU97580.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC508]
 gi|192931307|gb|EDV83909.1| lysyl-tRNA synthetase LysU [Escherichia coli E22]
 gi|194415153|gb|EDX31422.1| lysyl-tRNA synthetase LysU [Escherichia coli B171]
 gi|208726904|gb|EDZ76505.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4206]
 gi|208735239|gb|EDZ83926.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4045]
 gi|208740055|gb|EDZ87737.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4042]
 gi|209162047|gb|ACI39480.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4115]
 gi|209750618|gb|ACI73616.1| lysine tRNA synthetase [Escherichia coli]
 gi|209750620|gb|ACI73617.1| lysine tRNA synthetase [Escherichia coli]
 gi|209750622|gb|ACI73618.1| lysine tRNA synthetase [Escherichia coli]
 gi|209750624|gb|ACI73619.1| lysine tRNA synthetase [Escherichia coli]
 gi|209750626|gb|ACI73620.1| lysine tRNA synthetase [Escherichia coli]
 gi|209914879|dbj|BAG79953.1| lysyl-tRNA synthase [Escherichia coli SE11]
 gi|217322409|gb|EEC30833.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. TW14588]
 gi|218354564|emb|CAV01470.1| lysine tRNA synthetase, inducible [Escherichia coli 55989]
 gi|218363451|emb|CAR01105.1| lysine tRNA synthetase, inducible [Escherichia coli IAI1]
 gi|238861695|gb|ACR63693.1| lysine tRNA synthetase, inducible [Escherichia coli BW2952]
 gi|254595552|gb|ACT74913.1| lysine tRNA synthetase, inducible [Escherichia coli O157:H7 str.
           TW14359]
 gi|257756882|dbj|BAI28384.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O26:H11
           str. 11368]
 gi|257762071|dbj|BAI33568.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O103:H2
           str. 12009]
 gi|260451041|gb|ACX41463.1| lysyl-tRNA synthetase [Escherichia coli DH1]
 gi|290765419|gb|ADD59380.1| Lysyl-tRNA synthetase, heat inducible [Escherichia coli O55:H7 str.
           CB9615]
 gi|291320895|gb|EFE60337.1| lysyl-tRNA synthetase [Escherichia coli B088]
 gi|291430354|gb|EFF03352.1| lysyl-tRNA synthetase [Escherichia coli B185]
 gi|299878984|gb|EFI87195.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300318762|gb|EFJ68546.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300401741|gb|EFJ85279.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300412180|gb|EFJ95490.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300452701|gb|EFK16321.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300526109|gb|EFK47178.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300529463|gb|EFK50525.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300838698|gb|EFK66458.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301076963|gb|EFK91769.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|306907840|gb|EFN38341.1| lysyl-tRNA synthetase [Escherichia coli W]
 gi|309704599|emb|CBJ03949.1| lysyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|315063447|gb|ADT77774.1| lysine tRNA synthetase, inducible [Escherichia coli W]
 gi|315138686|dbj|BAJ45845.1| lysyl-tRNA synthetase [Escherichia coli DH1]
 gi|315253814|gb|EFU33782.1| lysyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|320190736|gb|EFW65386.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320638889|gb|EFX08535.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320644258|gb|EFX13323.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320649576|gb|EFX18100.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320654972|gb|EFX22933.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320660479|gb|EFX27940.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320665749|gb|EFX32786.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|323162115|gb|EFZ47984.1| lysyl-tRNA synthetase [Escherichia coli E128010]
 gi|323182237|gb|EFZ67647.1| lysyl-tRNA synthetase [Escherichia coli 1357]
 gi|323380483|gb|ADX52751.1| lysyl-tRNA synthetase [Escherichia coli KO11]
 gi|323935444|gb|EGB31782.1| lysyl-tRNA synthetase [Escherichia coli E1520]
 gi|323940049|gb|EGB36243.1| lysyl-tRNA synthetase [Escherichia coli E482]
 gi|323946124|gb|EGB42159.1| lysyl-tRNA synthetase [Escherichia coli H120]
 gi|324017207|gb|EGB86426.1| lysyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|324118698|gb|EGC12590.1| lysyl-tRNA synthetase [Escherichia coli E1167]
 gi|326341816|gb|EGD65599.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|326346608|gb|EGD70342.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|331035853|gb|EGI08091.1| lysine--tRNA ligase [Escherichia coli H736]
 gi|331061908|gb|EGI33833.1| lysine--tRNA ligase [Escherichia coli TA271]
 gi|331071724|gb|EGI43060.1| lysine--tRNA ligase [Escherichia coli H591]
          Length = 505

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 426 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|312134580|ref|YP_004001918.1| lysyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774631|gb|ADQ04118.1| lysyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 495

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 75/352 (21%), Positives = 143/352 (40%), Gaps = 29/352 (8%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   D+        G FV ++G +   R HG   F+DI D  G  Q+    D    E  
Sbjct: 41  THYSTDIKENFEEFEGKFVSVAGRMLSKRGHGKASFVDILDTKGKIQIYIKIDEVGEEKY 100

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  +  + +   G ++    E        G+I + A++IE+L+     PLP         
Sbjct: 101 EEFKEYYDI---GDIIGVKGEVF--KTHKGEISIKAKEIEMLTKCLR-PLPEKWHGLKDV 154

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL  +   ++  +KR+ II S+R  +    F+E  TP+L+  +    AR F
Sbjct: 155 DTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFLDDRGFLEVETPVLSPIAGGAAARPF 214

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + + + L+  GFD+ +++   FR+E       P EF  +++ 
Sbjct: 215 ITHHNALDIDLY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEVY 272

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ +  D+++  E ++  V +E      ++     I      +R           + M 
Sbjct: 273 QAYADYKDMMDLTEELITTVAQEVLGTLKITYQGQEIDLTPPWQR-----------LTMV 321

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK-----GGGGNRAFCDRMNEW 347
              + +V  +F   S +       +   I  +     G   N  F  ++ ++
Sbjct: 322 EAIKKYVGVDFENISSLDEAKKIAKDIGIEVEENWQVGHIINEVFEKKVEDF 373



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 6/152 (3%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA+++GI     ++   I++   +E   E+  I          +    + +  D     
Sbjct: 343 KIAKDIGIEVEENWQVGHIIN-EVFEKKVEDFLIQPTFIMDYPVEVSPLAKRKKDNPQF- 400

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMP 534
             +++L     EIA+     +      + F      ++               A + GMP
Sbjct: 401 TERFELFITCREIANAFSELNDPFDQKERFLEQLKERQRGNQEAHMMDEDFIEALEYGMP 460

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P GG+  GIDR+VMLL  + ++R+V LFP  +
Sbjct: 461 PTGGLGIGIDRLVMLLTDSYSIRDVLLFPTMR 492


>gi|260582140|ref|ZP_05849934.1| lysyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094772|gb|EEW78666.1| lysyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 502

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 70/299 (23%), Positives = 132/299 (44%), Gaps = 20/299 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G++ + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W
Sbjct: 54  GEI-LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTW 112

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L   G ++            T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 113 DL---GDIVGVKGTLF--KTKTDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +    +  + R++++  +R   I++ F+E  TP+L        AR F+      
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNAL 226

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  
Sbjct: 227 DVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYH 284

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           D+++  E +LR +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 285 DLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATVKYGADKGIVKEDL 343



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 10/153 (6%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+ LGI     +    I++   +E   E   I      F M      S     ND     
Sbjct: 353 AERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQPT---FLMAHPAEISPLARRNDENPDV 408

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMP 534
             +++L   G EI +G    + +E   + F     +KE  ++           A + G+P
Sbjct: 409 TDRFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           P  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|260439200|ref|ZP_05793016.1| lysine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292808215|gb|EFF67420.1| lysine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 681

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 61/297 (20%), Positives = 124/297 (41%), Gaps = 19/297 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +I+D  G  QV  + D    +     +   +  I G+    
Sbjct: 97  VTIAGRMMFKRVMGKASFCNIQDLKGNIQVYVSKDGVGEDSYADFKKSDIGDIFGI---- 152

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLH 139
             +      +TG+I + A +I +LS + ++ LP           R++ R++DL  +  + 
Sbjct: 153 --KGFAFRTMTGEISIHASEIVLLSKSLQI-LPEKYHGLTDTDARYRQRYVDLIMNSEVK 209

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
              +KR+ II  +R  +   +F+E  TP+L A+    A                L  + +
Sbjct: 210 DTFIKRSMIIKEIRNFLAGRDFMEVETPMLVANPGGAAARPFETHYNALNEDVKLRISLE 269

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++   E++ R 
Sbjct: 270 LYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYNGMMELTESMFRY 328

Query: 260 VFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKPDLRNPIIMHNVTEHF 306
           + E+       + N         F RI   D +++Y G D   ++       + +  
Sbjct: 329 LAEKVCGSTKFTYNGIEIDFGKPFERITMTDCVKKYAGIDFDAVKTDEEAKALAKEH 385



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 77/203 (37%), Gaps = 34/203 (16%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEE--KKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +A+E  I          I++  F E+ E+E  +      +P  +    +   K  D   +
Sbjct: 381 LAKEHNIEYEERHNKGHILNLFFEEYCEKELVQPTFVMDHPIAISP--LTKKKPTDPEKV 438

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGM 533
              +++L  NG+E+ +     +      + F+    +    +            A + GM
Sbjct: 439 --ERFELFINGWEMCNAYSELNDPIDQRERFALQDAAAAAGDEEAEHTDEDFLNALEIGM 496

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           PP GGI  GIDR+VMLL  +  +R+V LFP  ++                        ++
Sbjct: 497 PPTGGIGYGIDRLVMLLTDSPAIRDVLLFPTMKS------------------------LD 532

Query: 594 NPKKILKISVTTILRNVYGLKII 616
             KK  K S +  +     ++ I
Sbjct: 533 ADKKTSKTSESAPVEETKPVEKI 555


>gi|332346138|gb|AEE59472.1| lysyl-tRNA synthetase LysS [Escherichia coli UMNK88]
          Length = 505

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 67/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP   +  GIDR++ML
Sbjct: 426 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAVLGIGIDRMIML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|284008433|emb|CBA74887.1| lysyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 504

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 78/347 (22%), Positives = 147/347 (42%), Gaps = 37/347 (10%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D+   V ++G +   R  G   F  ++D  G  Q+  + D     I      +W L   G
Sbjct: 62  DLDIDVSVAGRMITRRIMGKASFATLQDMGGRIQIYISRDDLPEGIYNEQFKKWDL---G 118

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR- 134
            ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  
Sbjct: 119 DILGVKGKLF--KTKTGELTIHGYEVYLLTKALR-PLPDKFHGLADQETRYRQRYLDLIA 175

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
            D   +  + R+R+++++R  M++++F+E  TP++        AR F+          Y 
Sbjct: 176 NDRSRQTFITRSRVLSALRNFMVSKDFMEVETPMMQVIPGGAAARPFITHHNALDIDMY- 234

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   
Sbjct: 235 LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SPRHNPEFTMMELYMAYADYKDLIVLT 293

Query: 254 ENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           E + R V +E      V            F ++   +AI +Y       R   ++ ++ +
Sbjct: 294 EELFRTVTQEVLGTTQVKYGEHLFDFGQPFSKMTMKEAIVKY-------RAETVLADLDD 346

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
               +     +K L++ P         KG G  R  C+     A S 
Sbjct: 347 MTKAT---AIAKSLNIEPE--------KGWGLGRLQCEIFEAVAESH 382



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 66/200 (33%), Gaps = 21/200 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P +K          R    + D D             + + +        LG + C  FE
Sbjct: 322 PFSKMTMKEAIVKYRAETVLADLDDM-----TKATAIAKSLNIEPEKGWGLGRLQCEIFE 376

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND       +++    G EI +
Sbjct: 377 AV------------AESHLIQPTFITEYPAEVSPLARRNDNNPFITDRFEFFIGGREIGN 424

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F+     K+  ++           A + G+PP  G+  GIDR++ML
Sbjct: 425 GFSELNDAEDQAERFAQQVRQKDEGDDEAMFYDEDYITALEHGLPPTAGLGIGIDRMIML 484

Query: 550 LLGAKNVREVSLFPMSQNFC 569
           L  +  +R+V LFP  +   
Sbjct: 485 LTDSHTIRDVILFPALRPGK 504


>gi|46138565|ref|XP_390973.1| hypothetical protein FG10797.1 [Gibberella zeae PH-1]
          Length = 534

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 113/576 (19%), Positives = 193/576 (33%), Gaps = 120/576 (20%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V +SGWV  VR   G+ F+DI D   +  V    D +   +A  +R    + + G  +  
Sbjct: 52  VEVSGWVRSVRKSSGVRFIDITDGSSMRPVQVVVDKS---LAADMRPGAAVRLKGTWVDE 108

Query: 81  SAET---------------INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           S +                   +    Q EL   ++E L  ++ +  P+  + + PES+R
Sbjct: 109 SGKKTLASSSAQLPDTKGECETSTSPEQPELKVSEVEFLGGSDPMTYPIQNKYQSPESLR 168

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
                L  R       +  R+     +      E F +   PI+T+S  EGA +  V   
Sbjct: 169 -TISHLRSRTPLNSTMLRLRSDATAMLTQFFFRERFQQTHPPIITSSDCEGAGEAFVVKA 227

Query: 186 VNQGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
            +   F+  P+    + Q + + L A      + ++P FR E   + R   EFY L+ EM
Sbjct: 228 SSPDEFFRAPKYLTVSSQLHLEAL-AQSLGNVWTLSPTFRAEKSDTSRHLSEFYMLEAEM 286

Query: 242 SFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           SFV + ++++N  + +L  +       N             A +    ++ D + P    
Sbjct: 287 SFVDDMNEVMNLAQRMLNSLTSGLKELN-------------AAKELKKNRVDSKEP---- 329

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                   SE   F  ++        W          R       E  +           
Sbjct: 330 --------SERLAFKDLVEQEQLDRRWQGMLTTKTWPRITYSEAIEILK----------- 370

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
                        P+A                             P       ++   ++
Sbjct: 371 -------------PIADQFK-----------------------HRPQWGAGLQSEHEKYL 394

Query: 421 AQELGIIN-CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           A+ +G     + +   +I  +P        + I      F M Q       G     +  
Sbjct: 395 AERIGYDETTDAYVPVFITQYP--------RDIKA----FYMRQSSSSPSSG-----LTV 437

Query: 480 FQYD-LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMP 534
             +D LV N  E+A G +R H    + +    +G+      +             + G P
Sbjct: 438 DCFDLLVPNMGELAGGSMREHRLPQLKENMRALGLEVPSKHSAGGKEMAWYLDLRRWGCP 497

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PHGG   G DR++  L G  NVR+V  FP   + CD
Sbjct: 498 PHGGFGLGFDRLLSYLSGVPNVRDVVPFPRHYHRCD 533


>gi|294793384|ref|ZP_06758529.1| lysine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294455815|gb|EFG24180.1| lysine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 505

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 20/286 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +  +R HG   F +IRD  G  QV    D    E  K V+   +  I G+ 
Sbjct: 57  GQPVVIAGRLMTIRSHGKTAFANIRDKSGDIQVYFRKDVLGEEAYKYVKMLDIGDIIGV- 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                E       TG++ +   K+ +LS +   PLP          +R++ R++DL  + 
Sbjct: 116 -----EGHVFKTHTGEVTIKVNKLTLLSKSLR-PLPEKWHGLKDTELRYRQRYVDLIVNP 169

Query: 138 LHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
             ++  VKR++I+  +R  M+ + F+E  TP++ A      AR F+          Y + 
Sbjct: 170 EVRDTFVKRSQIVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALDIDIY-MR 228

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G DR F++  CFR+E    +R   EF  ++   ++ + +D +   EN
Sbjct: 229 IAPELYLKRLIVGGMDRVFEMNRCFRNEGID-NRHNPEFTTIESYQAYGDVEDAIRLTEN 287

Query: 256 VLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           ++    +E      ++           + RI   + +++Y  +  D
Sbjct: 288 LVSYCAQEVLGTQEITYQGTEINLTPPWNRITMAEGVKKYTGEDFD 333



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 4/92 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++    G E+A+G    +      Q F +    +E  ++           A + G+P
Sbjct: 401 TERFEAFIYGRELANGFSELNDPIDQKQRFLDQLKEREAGDDEAHRMDEDFVTALEYGLP 460

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P  G+  GIDR+VM L  + ++R+V LFP+ +
Sbjct: 461 PTAGLGVGIDRLVMFLTDSASIRDVLLFPLMK 492


>gi|254037141|ref|ZP_04871218.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|226840247|gb|EEH72249.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
          Length = 514

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 51  RDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 110

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 111 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 164

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 165 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 224

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 225 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 282

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 283 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 328

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 329 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEV 388

Query: 348 ARSQ 351
           A + 
Sbjct: 389 AEAH 392



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 332 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 386

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 387 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 434

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 435 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 494

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 495 FTNSHTIRDVILFPAMR 511


>gi|242240699|ref|YP_002988880.1| lysyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242132756|gb|ACS87058.1| lysyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 505

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 71/347 (20%), Positives = 134/347 (38%), Gaps = 33/347 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +G  V ++G +   R  G   F+ ++D  G  Q+  + D     +      +W L  
Sbjct: 61  LEALGLEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              D   +    R++I+  +R  M+  +F+E  TP++        AR F+          
Sbjct: 175 IANDDSRQTFRVRSQILAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS-- 309
             E++ R + ++      V               YG    D   P     + E       
Sbjct: 293 LTESLFRTLAQDVLGTTEVP--------------YGDQTFDFGKPFEKLTMREAIKKYRP 338

Query: 310 -----EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
                +   F    ++     V     K  G  R   +   + A + 
Sbjct: 339 ETNLADLDSFDAAKAIAESIGVK--VEKSWGLGRIVTEIFEDVAEAH 383



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 71/202 (35%), Gaps = 21/202 (10%)

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
                   P  K       +  R   ++ D DS      D  K  + +   +   +  LG
Sbjct: 315 DQTFDFGKPFEKLTMREAIKKYRPETNLADLDSF-----DAAKAIAESIGVKVEKSWGLG 369

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
            I    FE            +  E  +         P       + ND+      +++  
Sbjct: 370 RIVTEIFE------------DVAEAHLIQPTFITEYPAEVSPLARRNDINPEITDRFEFF 417

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAA 541
             G EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  
Sbjct: 418 IGGREIGNGFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGI 477

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           GIDR+VML   +  +R+V LFP
Sbjct: 478 GIDRLVMLFTNSHTIRDVILFP 499


>gi|126653301|ref|ZP_01725412.1| lysyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589975|gb|EAZ84104.1| lysyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 500

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 72/359 (20%), Positives = 137/359 (38%), Gaps = 37/359 (10%)

Query: 5   RTHSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   ++                  V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 38  RTHLSTEVKEQFADQTKEQLEENLQEVIIAGRIMTKRGKGKAGFAHIQDLGGQIQIYVRQ 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +  I G+               G++ + A++   L+ A   P+P 
Sbjct: 98  DHVGEEAYELFKQADLGDIVGI------RGNVFRTQVGELSVKAEEFTFLTKALR-PMPE 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R+LDL  +   K   + R++II ++R  +    ++E  TP+L T +
Sbjct: 151 KFHGLQDVEQRYRQRYLDLMTNEESKLTFIARSKIIRAIRNYLDNSGYLEVETPMLHTIA 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 211 GGAAARPFITHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  DI++  EN++  V +E     TV      I      RR       
Sbjct: 269 EFTMIELYEAYADYQDIMSLTENLIAHVAQEVLGTTTVQYGEDEINLAVGWRR------- 321

Query: 293 LRNPIIMHNVTEHFVHSEFR-----VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
               + M +  +     +F        ++ L+   G EV  +   G   N  F  ++ E
Sbjct: 322 ----VHMVDAVKEATGVDFWQPMTKEQAQALAKEHGVEVKDVHEVGHIINEFFEQKIEE 376



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 6/154 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E G+   +  E   I++  F+E   EE  +      +  P       K N     
Sbjct: 346 QALAKEHGVEVKDVHEVGHIIN-EFFEQKIEET-LVQPTFVYGHPVEISPLAKKNPEDER 403

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGM 533
              +++L     E A+     +      Q F      K    +           A + GM
Sbjct: 404 FTDRFELFIVRREHANAFTELNDPIDQRQRFEAQLAEKAAGNDEAHEMDNDFIEALEYGM 463

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  GIDR++MLL  + ++R+V LFP  ++
Sbjct: 464 PPTGGLGIGIDRLIMLLTNSPSIRDVLLFPTMRH 497


>gi|238019653|ref|ZP_04600079.1| hypothetical protein VEIDISOL_01527 [Veillonella dispar ATCC 17748]
 gi|237863694|gb|EEP64984.1| hypothetical protein VEIDISOL_01527 [Veillonella dispar ATCC 17748]
          Length = 507

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 20/286 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +  +R HG   F ++RD  G  QV    D    E  K V+   +  I G+ 
Sbjct: 57  GQPVVIAGRLMTIRSHGKTAFANVRDKSGDIQVYFRKDVLGEEAYKYVKMLDIGDIIGV- 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                E       TG++ +   K+ +LS +   PLP          +R++ R++DL  + 
Sbjct: 116 -----EGHVFKTHTGEVTIKVNKLTLLSKSLR-PLPEKWHGLKDTELRYRQRYVDLIVNP 169

Query: 138 LHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
             ++  VKR++I+  +R  M+ + F+E  TP++ A      AR F+          Y + 
Sbjct: 170 EVRDTFVKRSQIVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALDIDIY-MR 228

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G DR F++  CFR+E    +R   EF  ++   ++ + +D +   EN
Sbjct: 229 IAPELYLKRLIVGGMDRVFEMNRCFRNEGID-NRHNPEFTTIESYQAYGDVEDAIRLTEN 287

Query: 256 VLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           ++    +E      ++           + RI   + +++Y  +  D
Sbjct: 288 LVSYCAQEVLGTQEITYQGTEINLTPPWNRITMAEGVKKYTGEDFD 333



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 4/92 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++    G E+A+G    +      Q F +    +E  ++           A + G+P
Sbjct: 401 TERFEAFIYGRELANGFSELNDPIDQKQRFLDQLKEREAGDDEAHRMDEDFVTALEYGLP 460

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P  G+  GIDR+VM L  + ++R+V LFP+ +
Sbjct: 461 PTAGLGVGIDRLVMFLTDSASIRDVLLFPLMK 492


>gi|145635060|ref|ZP_01790766.1| lysyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145267668|gb|EDK07666.1| lysyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 502

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 70/299 (23%), Positives = 132/299 (44%), Gaps = 20/299 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G++ + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W
Sbjct: 54  GEI-LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTW 112

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L   G ++            T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 113 DL---GDIVGVKGTLF--KTKTDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +    +  + R++++  +R   I++ F+E  TP+L        AR F+      
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNAL 226

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  
Sbjct: 227 DVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYH 284

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           D+++  E +LR +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 285 DLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATVKYGADKGIVKEDL 343



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 10/153 (6%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+ LGI     +    I++   +E   E   I      F M      S     ND     
Sbjct: 353 AERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQPT---FLMAHPAEISPLARRNDENPEV 408

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMP 534
             +++L   G EI +G    + +E   + F     +KE  ++           A + G+P
Sbjct: 409 TDRFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           P  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|117626414|ref|YP_859737.1| lysyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|161486020|ref|NP_756986.2| lysyl-tRNA synthetase [Escherichia coli CFT073]
 gi|162138308|ref|YP_543665.2| lysyl-tRNA synthetase [Escherichia coli UTI89]
 gi|218561217|ref|YP_002394130.1| lysyl-tRNA synthetase [Escherichia coli S88]
 gi|218707745|ref|YP_002415264.1| lysyl-tRNA synthetase [Escherichia coli UMN026]
 gi|227886830|ref|ZP_04004635.1| lysine--tRNA ligase [Escherichia coli 83972]
 gi|293402762|ref|ZP_06646859.1| lysS [Escherichia coli FVEC1412]
 gi|293407855|ref|ZP_06651695.1| lysyl-tRNA synthetase [Escherichia coli B354]
 gi|298378291|ref|ZP_06988175.1| lysS [Escherichia coli FVEC1302]
 gi|300897550|ref|ZP_07115962.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300940610|ref|ZP_07155175.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300988376|ref|ZP_07178640.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301021726|ref|ZP_07185698.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|301047649|ref|ZP_07194712.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|331650168|ref|ZP_08351241.1| lysine--tRNA ligase [Escherichia coli M605]
 gi|331660708|ref|ZP_08361640.1| lysine--tRNA ligase [Escherichia coli TA206]
 gi|39932415|sp|Q8FAT5|SYK2_ECOL6 RecName: Full=Lysyl-tRNA synthetase, heat inducible; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|115515538|gb|ABJ03613.1| lysyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|218367986|emb|CAR05786.1| lysine tRNA synthetase, inducible [Escherichia coli S88]
 gi|218434842|emb|CAR15778.1| lysine tRNA synthetase, inducible [Escherichia coli UMN026]
 gi|227836172|gb|EEJ46638.1| lysine--tRNA ligase [Escherichia coli 83972]
 gi|281181228|dbj|BAI57558.1| lysyl-tRNA synthetase [Escherichia coli SE15]
 gi|284924217|emb|CBG37317.1| lysyl-tRNA synthetase [Escherichia coli 042]
 gi|291429677|gb|EFF02691.1| lysS [Escherichia coli FVEC1412]
 gi|291472106|gb|EFF14588.1| lysyl-tRNA synthetase [Escherichia coli B354]
 gi|294491540|gb|ADE90296.1| lysyl-tRNA synthetase LysU [Escherichia coli IHE3034]
 gi|298280625|gb|EFI22126.1| lysS [Escherichia coli FVEC1302]
 gi|300300455|gb|EFJ56840.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300358698|gb|EFJ74568.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300397909|gb|EFJ81447.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300407476|gb|EFJ91014.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300454610|gb|EFK18103.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|307556300|gb|ADN49075.1| lysyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|307629201|gb|ADN73505.1| lysyl-tRNA synthetase [Escherichia coli UM146]
 gi|315287968|gb|EFU47370.1| lysyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315294016|gb|EFU53368.1| lysyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315296081|gb|EFU55390.1| lysyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|320193511|gb|EFW68148.1| lysyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|323189988|gb|EFZ75266.1| lysyl-tRNA synthetase [Escherichia coli RN587/1]
 gi|323950305|gb|EGB46186.1| lysyl-tRNA synthetase [Escherichia coli H252]
 gi|323954384|gb|EGB50168.1| lysyl-tRNA synthetase [Escherichia coli H263]
 gi|323965518|gb|EGB60972.1| lysyl-tRNA synthetase [Escherichia coli M863]
 gi|323975529|gb|EGB70630.1| lysyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324008622|gb|EGB77841.1| lysyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|327250072|gb|EGE61791.1| lysyl-tRNA synthetase [Escherichia coli STEC_7v]
 gi|330908475|gb|EGH36994.1| lysyl-tRNA synthetase (class 2) [Escherichia coli AA86]
 gi|331041113|gb|EGI13270.1| lysine--tRNA ligase [Escherichia coli M605]
 gi|331051750|gb|EGI23789.1| lysine--tRNA ligase [Escherichia coli TA206]
          Length = 505

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 426 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|257453433|ref|ZP_05618728.1| lysyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257449185|gb|EEV24133.1| lysyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 510

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 64/313 (20%), Positives = 129/313 (41%), Gaps = 21/313 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ I D  G  Q   + +    EI    ++  +    G ++  
Sbjct: 72  VTVAGRIMLKRVMGKASFVTIADMTGRIQAYVSKNDLGEEIYNDFKTWDI----GDIIGV 127

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           +      N  TG++ + A ++++L+ +   PLP           R++ R LDL  +   +
Sbjct: 128 TGYVFRTN--TGELSVHATEVQLLTKSLR-PLPDKFHGLSDTEARYRSRHLDLMTNEDSR 184

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
           N  + R+++I  +R  M+ E ++E  TP++        AR F+          + L  AP
Sbjct: 185 NAFIIRSKVIAGIREYMLNERYMEVETPMMHVIPGGAVARPFVTHHNALDMPLF-LRIAP 243

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   +   P EF  ++   ++ + +D++   EN+  
Sbjct: 244 ELYLKRLVVGGFERVFEINRNFRNEGVSARHNP-EFTMIEFYQAYADYEDLMKLTENMFE 302

Query: 259 GVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
            +  +      +            F R+    AI +Y  D  D+        + ++  + 
Sbjct: 303 KLANDILGTTEIDYQGEAISFKAPFERLPMTKAIEKYA-DNFDMSKIADRDYLADYAKNV 361

Query: 310 EFRVFSKILSVNP 322
             +    I  +  
Sbjct: 362 LKQDVKDIFGIGK 374



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E K +         P       + ND  S    +++L   G EIA+G    +   
Sbjct: 380 FEETAETK-LRQPTFVTEYPAETSPLARRNDDNSEITDRFELFIGGREIANGFSELNDPI 438

Query: 503 VMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F      K+  ++           A   G+PP  G   GIDR+VML   A ++R+
Sbjct: 439 DQAERFKQQVAEKDAGDDEAMHYDAEFIEALSYGLPPTAGEGIGIDRLVMLFTNAPSIRD 498

Query: 559 VSLFPMSQN 567
           V LFP  + 
Sbjct: 499 VILFPHMRR 507


>gi|110644488|ref|YP_672218.1| lysyl-tRNA synthetase [Escherichia coli 536]
 gi|191173390|ref|ZP_03034919.1| lysyl-tRNA synthetase LysU [Escherichia coli F11]
 gi|218692425|ref|YP_002400637.1| lysyl-tRNA synthetase [Escherichia coli ED1a]
 gi|300995361|ref|ZP_07181057.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|306815736|ref|ZP_07449885.1| lysyl-tRNA synthetase [Escherichia coli NC101]
 gi|331681066|ref|ZP_08381703.1| lysine--tRNA ligase [Escherichia coli H299]
 gi|110346080|gb|ABG72317.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli 536]
 gi|190906366|gb|EDV65976.1| lysyl-tRNA synthetase LysU [Escherichia coli F11]
 gi|218429989|emb|CAR10822.1| lysine tRNA synthetase, inducible [Escherichia coli ED1a]
 gi|222035857|emb|CAP78602.1| Lysyl-tRNA synthetase, heat inducible [Escherichia coli LF82]
 gi|300304862|gb|EFJ59382.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|305851398|gb|EFM51853.1| lysyl-tRNA synthetase [Escherichia coli NC101]
 gi|312948724|gb|ADR29551.1| lysyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|324015778|gb|EGB84997.1| lysyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|331081287|gb|EGI52448.1| lysine--tRNA ligase [Escherichia coli H299]
          Length = 505

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 426 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|261342292|ref|ZP_05970150.1| lysine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288315633|gb|EFC54571.1| lysine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 505

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 137/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+  + 
Sbjct: 42  RDHTSDQLHADFDAKENEELEALNVEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     I      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGIYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +     R++I+  +R  M+  +F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRKTFKIRSQIMAGIRQFMVNRDFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V               YG +  D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGTTEVP--------------YGEEVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        +E        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 67/203 (33%), Gaps = 30/203 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
            +     + K+        +      +   +     G  ++           I +E  + 
Sbjct: 326 KLTMREAIKKYRPETEMADLDNFDSAK---AIAESIGIKVEKSWGLGRIVTEIFEE--VA 380

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             +  +  +I ++P               +P          +           +++    
Sbjct: 381 EAHLIQPTFITEYP------------AEVSPLARRNDENPEITD---------RFEFFIG 419

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGI 543
           G EI +G    + +E   Q F +   +K   ++           A + G+PP  G+  GI
Sbjct: 420 GREIGNGFSELNDAEDQAQRFQDQVNAKAAGDDEAMFFDEDYVTALEHGLPPTAGLGIGI 479

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR+VML   +  +R+V LFP  +
Sbjct: 480 DRMVMLFTNSHTIRDVILFPAMR 502


>gi|166365564|ref|YP_001657837.1| lysyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166087937|dbj|BAG02645.1| lysyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 573

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 134/349 (38%), Gaps = 28/349 (8%)

Query: 10  GDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA---KSV 65
            DL    ++ + V ++G +   R  G + F +++D  G  Q+  +       +A    + 
Sbjct: 56  ADLAPGEEISAEVAIAGRIIARRILGKLAFFNLQDETGTIQLYLDKKRISETMAAVPNAF 115

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++             G++ +   + EIL+ +  LPLP           R
Sbjct: 116 NTVIKLTDTGDILGAKGTIKRTE--RGELSIYVNEYEILTKSL-LPLPDKWHGLTDVEKR 172

Query: 126 FKYRFLDLRRDTLHKNIVKRT-RIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
           ++ R++DL  +   +   +R  +I  ++R  +  E FIE  TP+L + +    AR F+  
Sbjct: 173 YRQRYVDLIVNPEVRQTFRRRAQITAAIRRYLDQEGFIEIETPVLQSEAGGADARPFITY 232

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               +   Y L  A + + + L+  GF++ F++   FR+E   +   P EF  +++  ++
Sbjct: 233 HNTLEMELY-LRIATELHLKRLIVGGFEKVFELGRIFRNEGVSTKHNP-EFTSIEIYQAY 290

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            +  D++   EN++    ++      ++     I      RR           + MH + 
Sbjct: 291 ADYYDMMELTENIIVNAAQDVLGTLKITYQDREIDLTPPWRR-----------VTMHELV 339

Query: 304 EHFVHSEFRVFSK------ILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           +     +   F                        G   N AF  ++ E
Sbjct: 340 QEITGVDLNSFEDFESARIAAENAGIGVPEDCKTIGKLLNEAFEQKVEE 388



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 55/158 (34%), Gaps = 27/158 (17%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
           C       N   ++   +     +  +++DFP      E   +   H   T         
Sbjct: 371 CKTIGKLLNEAFEQ--KVEETLIQPTFVLDFPV-----EISPLAKPHRSKT--------- 414

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
                      +++L   G E+A+            Q      + K       +      
Sbjct: 415 -------DLVERFELYVVGRELANSFSELTDPIDQRQRLEAQALKKAAGDLEAQGVDEDF 467

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A + GMPP GG+  GIDR++MLL  + ++R+V  FP
Sbjct: 468 LTALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIAFP 505


>gi|309973326|gb|ADO96527.1| Lysyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 502

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 70/299 (23%), Positives = 132/299 (44%), Gaps = 20/299 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G++ + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W
Sbjct: 54  GEI-LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTW 112

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L   G ++            T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 113 DL---GDIVGVKGTLF--KTKTDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +    +  + R++++  +R   I++ F+E  TP+L        AR F+      
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNAL 226

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  
Sbjct: 227 DVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYH 284

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           D+++  E +LR +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 285 DLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDL 343



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 12/180 (6%)

Query: 396 GDSCFFIAGDPLKFCSFAADA-RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            D+      D         D  R    A+ LGI     +    I++   +E   E   I 
Sbjct: 326 HDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQ 384

Query: 454 FAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                F M      S     ND       +++L   G EI +G    + +E   + F   
Sbjct: 385 PT---FLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQ 441

Query: 512 GISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 442 VAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|53802401|ref|YP_112835.1| lysyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|53756162|gb|AAU90453.1| lysyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 496

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 68/298 (22%), Positives = 125/298 (41%), Gaps = 22/298 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RY   +   L  + V   V+L+G +   R  G   F  I+D  G  Q+    D     + 
Sbjct: 44  RYGDETAEALEETAV--SVKLAGRLMGKRIMGKASFAHIQDMSGRIQIFLQRDGLAEGVY 101

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  +S  +  + G+      E       TG++ + A  I +L+ +   PLP         
Sbjct: 102 EEFKSWDIGDVIGV------EGTVFRTKTGELSVKASNIRLLTKSLR-PLPEKFHGLTDA 154

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDF 180
             R++ R+LDL   +   +    R+ I+  +R  +    FIE  TP++        A+ F
Sbjct: 155 ETRYRQRYLDLLMNEESRRVFQLRSAIVRYIRDFLSERGFIEAETPMMQVIPGGARAKPF 214

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  ++  
Sbjct: 215 VTHHNALGLDLY-LRIAPELYLKRLVVGGFEKVFEINRSFRNEGLSTRHNP-EFTMIEFY 272

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTD 289
            ++ +  D+++  E ++RG+ +    G  V++          F R+   ++I  Y  D
Sbjct: 273 QAYADYRDLMDLTETLMRGIAQNLLGGTVVTHQGKDYDLGRPFRRMTVLESIIHYNPD 330



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 5/128 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E+ ++D        P       + ND       +++    G E+A+G    +  E
Sbjct: 367 FEKTVED-RLDEPTFITAYPAEVSPLARRNDENPFITDRFEFFVGGRELANGFSELNDPE 425

Query: 503 VMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F      K   +           RA + G+PP  G   GIDR+VM    + ++R+
Sbjct: 426 DQAERFRKQVEDKAAGDEEAMHYDADYIRALEYGLPPTAGEGIGIDRLVMFFTDSPSIRD 485

Query: 559 VSLFPMSQ 566
           V LFP  +
Sbjct: 486 VILFPHMR 493


>gi|237703720|ref|ZP_04534201.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|26111378|gb|AAN83560.1|AE016771_71 Lysyl-tRNA synthetase, heat inducible [Escherichia coli CFT073]
 gi|91075253|gb|ABE10134.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli UTI89]
 gi|226901632|gb|EEH87891.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
          Length = 514

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 51  RDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 110

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 111 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 164

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 165 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 224

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 225 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 282

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 283 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 328

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 329 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEV 388

Query: 348 ARSQ 351
           A + 
Sbjct: 389 AEAH 392



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 332 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 386

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 387 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 434

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 435 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 494

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 495 FTNSHTIRDVILFPAMR 511


>gi|300859194|ref|YP_003784177.1| lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686648|gb|ADK29570.1| lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|302331450|gb|ADL21644.1| Lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 518

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 101/555 (18%), Positives = 189/555 (34%), Gaps = 122/555 (21%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVM 78
            V ++G V  VR  G + F  +++  G          +  E+     ++W   +D G ++
Sbjct: 75  EVAIAGRVLFVRNTGKLCFAALQEGNG---EHIQAMLSLAEVGADALADWKAHVDLGDIV 131

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDT 137
           S     I +    G++ +  Q  ++ S +       F   +  E  R ++R+ DL  R+ 
Sbjct: 132 SVRGRVIASK--RGELSVMVQSWQMASKSLRPLPVAFA--DMSEDTRIRHRYTDLIMREE 187

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
              N + R +++ S+R  + +  F+E  TP+L        AR F   S       Y L  
Sbjct: 188 ARNNALTRIKVMRSLRNFLESRGFLEVETPMLQTLHGGAAARPFETHSNALDIDLY-LRI 246

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y +  +  G +R F++   FR+E   S   P EF  L+   ++   DD     +++
Sbjct: 247 APELYLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFSMLETYQAYGTYDDGAKLHQDM 305

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           ++ + ++     T                           + + + TE+ +  E+     
Sbjct: 306 IQYIAKDVFGSTT---------------------------VTLADGTEYDLGGEWPSIEM 338

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG-QPGLAYIFWRLDESGNVAGMGPV 375
             S+N        P +      +  + +   A++ G +PG  +        G+   +  +
Sbjct: 339 YPSLNEALARK-FPGQPEVTIHSTVEELGGIAKAIGLEPGKGW--------GHGKFVEEI 389

Query: 376 AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435
            + L                                                        
Sbjct: 390 WEFLCEDQLTG-----------------------------------------------PI 402

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           ++ DFP               +P T      E             ++DL   GFE+A+G 
Sbjct: 403 FVRDFP------------VETSPLTRDHRSKE---------GVTEKWDLYVRGFELATGY 441

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                  +  + F +        ++           A + GMPP  G   GIDR++M L 
Sbjct: 442 SELVDPVIQRERFEDQARLAAGGDDEAMVLDEDFLTAMEQGMPPTSGTGMGIDRLLMALT 501

Query: 552 GAKNVREVSLFPMSQ 566
           G   +RE  LFPM +
Sbjct: 502 GLG-IRETVLFPMVK 515


>gi|37527421|ref|NP_930765.1| lysyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|39932032|sp|Q7N1C8|SYK_PHOLL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|36786856|emb|CAE15921.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 504

 Score =  211 bits (537), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 76/358 (21%), Positives = 144/358 (40%), Gaps = 35/358 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   +  +L   ++   V + G +   R  G   F+ ++D  G  Q+    D     I 
Sbjct: 51  KYDDKTQEELEALNID--VTVGGRMMTRRIMGKASFVTLQDMGGRIQLYVARDDLPEGIY 108

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
                +W L   G ++    +       TG++ +   ++ +L+ A   PLP        +
Sbjct: 109 NEQFKKWDL---GDILGARGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLADQ 162

Query: 123 SIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL  +   +     R++++ ++R  M+++ F+E  TP++        AR F
Sbjct: 163 ETRYRQRYLDLIANEESRKTFQIRSQVLLALRSFMVSKGFMEVETPMMQVIPGGAAARPF 222

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ 
Sbjct: 223 ITHHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELY 280

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M++ +  D++  +E + R + +                    + +YG  + D   P    
Sbjct: 281 MAYADYKDLIVLIEELFRTLTQNILGNT--------------LVKYGEQEFDFGKPFAQM 326

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351
            + E          + I  ++   +V AI         KG G  R  C+   E A S 
Sbjct: 327 TMKEAICKYRPE--TNIADLDDMDKVVAIAESLGIEVEKGWGLGRVQCEIFEETAESH 382



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 77/236 (32%), Gaps = 22/236 (9%)

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
              +     + E  R+  Q  L     +  E        P A+          R   ++ 
Sbjct: 284 ADYKDLIVLIEELFRTLTQNILGNTLVKYGEQ-EFDFGKPFAQMTMKEAICKYRPETNIA 342

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
           D D       D +   + +          LG + C  FE               E  +  
Sbjct: 343 DLDDM-----DKVVAIAESLGIEVEKGWGLGRVQCEIFE------------ETAESHLIQ 385

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
                  P       + ND       +++    G EI +G    + +E   + F+     
Sbjct: 386 PTFITEYPAEVSPLARRNDANPFITDRFEFFIGGREIGNGFSELNDAEDQAERFAEQVRQ 445

Query: 515 KEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           K+  ++           A + GMPP  G+  GIDR++MLL  +  +R+V LFP  +
Sbjct: 446 KDEGDDEAMFYDEDYVTALEHGMPPTAGLGIGIDRMIMLLTDSHTIRDVILFPAMR 501


>gi|302206884|gb|ADL11226.1| Lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|308277138|gb|ADO27037.1| Lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 518

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 101/555 (18%), Positives = 189/555 (34%), Gaps = 122/555 (21%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVM 78
            V ++G V  VR  G + F  +++  G          +  E+     ++W   +D G ++
Sbjct: 75  EVAIAGRVLFVRNTGKLCFAALQEGNG---EHIQAMLSLAEVGADALADWKAHVDLGDIV 131

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDT 137
           S     I +    G++ +  Q  ++ S +       F   +  E  R ++R+ DL  R+ 
Sbjct: 132 SVRGRVIASK--RGELSVMVQSWQMASKSLRPLPVAFA--DMSEDTRIRHRYTDLIMREE 187

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
              N + R +++ S+R  + +  F+E  TP+L        AR F   S       Y L  
Sbjct: 188 ARNNALTRIKVMRSLRNFLESRGFLEVETPMLQTLHGGAAARPFETHSNALDIDLY-LRI 246

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y +  +  G +R F++   FR+E   S   P EF  L+   ++   DD     +++
Sbjct: 247 APELYLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFSMLETYQAYGTYDDGAKLHQDM 305

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           ++ + ++     T                           + + + TE+ +  E+     
Sbjct: 306 IQYIAKDVFGSTT---------------------------VTLADGTEYDLGGEWPSIEM 338

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG-QPGLAYIFWRLDESGNVAGMGPV 375
             S+N        P +      +  + +   A++ G +PG  +        G+   +  +
Sbjct: 339 YPSLNEALARK-FPGQPEVTIHSTVEELGGIAKAIGLEPGKGW--------GHGKFVEEI 389

Query: 376 AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435
            + L                                                        
Sbjct: 390 WEFLCEDQLTG-----------------------------------------------PI 402

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           ++ DFP               +P T      E             ++DL   GFE+A+G 
Sbjct: 403 FVRDFP------------VETSPLTRDHRSKE---------GVTEKWDLYVRGFELATGY 441

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                  +  + F +        ++           A + GMPP  G   GIDR++M L 
Sbjct: 442 SELVDPVIQRERFEDQARLAAGGDDEAMVLDEDFLTAMEQGMPPTSGTGMGIDRLLMALT 501

Query: 552 GAKNVREVSLFPMSQ 566
           G   +RE  LFPM +
Sbjct: 502 GLG-IRETVLFPMVK 515


>gi|194437248|ref|ZP_03069346.1| lysyl-tRNA synthetase LysU [Escherichia coli 101-1]
 gi|253775242|ref|YP_003038073.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254164062|ref|YP_003047170.1| lysyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|194423804|gb|EDX39793.1| lysyl-tRNA synthetase LysU [Escherichia coli 101-1]
 gi|242379656|emb|CAQ34479.1| lysyl-tRNA synthetase, subunit of lysyl-tRNA synthetase / Ap[4]A
           synthetase / Ap[3]A synthetase [Escherichia coli
           BL21(DE3)]
 gi|253326286|gb|ACT30888.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253975963|gb|ACT41634.1| lysine tRNA synthetase, inducible [Escherichia coli B str. REL606]
 gi|253980119|gb|ACT45789.1| lysine tRNA synthetase, inducible [Escherichia coli BL21(DE3)]
 gi|323960364|gb|EGB56002.1| lysyl-tRNA synthetase [Escherichia coli H489]
 gi|323969887|gb|EGB65165.1| lysyl-tRNA synthetase [Escherichia coli TA007]
          Length = 505

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSEQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 426 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|183599837|ref|ZP_02961330.1| hypothetical protein PROSTU_03354 [Providencia stuartii ATCC 25827]
 gi|188022109|gb|EDU60149.1| hypothetical protein PROSTU_03354 [Providencia stuartii ATCC 25827]
          Length = 506

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 75/358 (20%), Positives = 139/358 (38%), Gaps = 35/358 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   S  +L   D+   V ++G +   R  G   F  ++D  G  Q+  + D     + 
Sbjct: 52  QYDEKSAEEL--EDLNIEVAIAGRMMTRRIMGKASFATLQDVGGRIQIYVSRDDLAEGVY 109

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
                +W L   G ++            TG++ +   ++ +L+ A   PLP        +
Sbjct: 110 NEQFKKWDL---GDILGAKGRLF--KTKTGELTVHCHEVRLLTKALR-PLPDKFHGLADQ 163

Query: 123 SIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL   D      + R++I+  +R  M+ + F+E  TP++        AR F
Sbjct: 164 ETRYRQRYLDLIANDESRHTFMVRSKILAELRNFMVGKGFMEVETPMMQVIPGGASARPF 223

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ 
Sbjct: 224 VTHHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNPEFTMMELY 281

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M++ +  D+++  E + R + +                    + +YG  + D   P    
Sbjct: 282 MAYADYRDLIDLTEELFRTLAQNVLGNT--------------VVKYGEQEFDFGKPFAKL 327

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351
            + E          + +  ++   +  AI            G  R  C+   E A S 
Sbjct: 328 TMKEAICKYRPE--TNVADLDDMDKAVAIAQSIGIKVENSWGLGRVQCEIFEEVAESH 383



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 76/233 (32%), Gaps = 22/233 (9%)

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
              R   D   E  R+  Q  L     +  E        P AK          R   ++ 
Sbjct: 285 ADYRDLIDLTEELFRTLAQNVLGNTVVKYGEQ-EFDFGKPFAKLTMKEAICKYRPETNVA 343

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
           D D       D     + +   +   +  LG + C  FE               E  +  
Sbjct: 344 DLDDM-----DKAVAIAQSIGIKVENSWGLGRVQCEIFEEV------------AESHLIQ 386

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
                  P       + ND       +++    G EI +G    + +E   + F+     
Sbjct: 387 PTFIIEYPAEVSPLARRNDENPFITDRFEFFIGGREIGNGFSELNDAEDQAERFAEQVRQ 446

Query: 515 KEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           K+  ++           A + G+PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 447 KDEGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTDSHTIRDVILFP 499


>gi|332288941|ref|YP_004419793.1| lysyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330431837|gb|AEC16896.1| lysyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 502

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 67/288 (23%), Positives = 123/288 (42%), Gaps = 19/288 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F+ ++D  G  Q+    D     + + + +   L         
Sbjct: 63  VSVAGRIMTRRKMGKASFITLQDMSGKIQLYVARDLLPEGVYEEIMAMLDLGDI-----V 117

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL-H 139
            A+       T ++ +    +E+L+ A   PLP        + +R++ R+LDL  +    
Sbjct: 118 GAKGTLFKTKTNELTVRCTALELLTKALR-PLPDKFHGLADQEMRYRQRYLDLISNEESR 176

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  + R+++I  +R   I + FIE  TP+L        AR F+          Y L  AP
Sbjct: 177 RTFIIRSKVIAGIREYFIGKGFIEVETPMLQVIPGGAAARPFITHHNALDIDMY-LRIAP 235

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +  D+++  E +LR
Sbjct: 236 ELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMIEYYQAYADYHDLMDNTEELLR 294

Query: 259 GVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
            +  +      V            F RI   DA+ +YG DK  ++  +
Sbjct: 295 KLALDILGTTIVPYGEYEFDFGKPFERITMHDAVLKYGADKGIVKEDL 342



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 71/181 (39%), Gaps = 12/181 (6%)

Query: 395 DGDSCFFIAGDPLKFCSFAADA-RNH-IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
             D+      D         D  R   +A++LGI     +    +++   +E   E   I
Sbjct: 324 MHDAVLKYGADKGIVKEDLYDFDRAKAVAEKLGIEIQKSWGLGSLVNA-IFEEVAEHHLI 382

Query: 453 DFAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                 F M      S     ND       +++L   G EI +G    + +E   + F+ 
Sbjct: 383 QPT---FLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNERFNA 439

Query: 511 VGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              +KE  ++           A + G+PP  G   GIDR+ ML   A+++R+V LFP  +
Sbjct: 440 QVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLFANAESIRDVILFPAMK 499

Query: 567 N 567
           +
Sbjct: 500 H 500


>gi|289422449|ref|ZP_06424292.1| lysine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289157021|gb|EFD05643.1| lysine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 637

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 63/308 (20%), Positives = 127/308 (41%), Gaps = 24/308 (7%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +H   ++     S  G  V L+G +   R  G   F+ ++D  G  Q     D    +  
Sbjct: 43  SHHSDEVIANYDSLEGQRVSLAGRIMSKRVMGKASFMHLQDQNGRIQAYVKRDDIGVDEY 102

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  ++  +  I G+      E       T ++ +  +K+ +LS + +  LP         
Sbjct: 103 KLFKTYDLGDIVGI------EGFVFKTKTEEVSVHVEKLVLLSKSLQ-VLPEKYHGLKDV 155

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
            +R++ R++DL  +   K     RT+ + ++R  +    F+E  TPIL T +    AR F
Sbjct: 156 DLRYRQRYVDLIVNPEVKEAFLTRTKALKALRSYLDDRGFLEVETPILNTIAGGANARPF 215

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + Y + L+  GFD+ +++   FR+E       P E+  +++ 
Sbjct: 216 ITHHNTLDIPMY-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDMKHNP-EYTAIELY 273

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDK 290
            ++ +  D++   ENV+  + E  +    +            + R+  ++ ++ Y G D 
Sbjct: 274 QAYADYKDMMEITENVISHMAEVATGSMKIDYQGTEIDFTPPWKRMTMEECVKEYAGVDF 333

Query: 291 PDLRNPII 298
            ++     
Sbjct: 334 SEINTDEE 341



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 64/154 (41%), Gaps = 17/154 (11%)

Query: 442 FYEWNEEEKKIDFA---HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   E++ I      H+P  +    +      D    +  +++   N +E+A+     
Sbjct: 366 FFEEFGEDQLIQPTFITHHPVEVSP--LAKRNVEDPR--RTDRFEAFANRWELANAFSEL 421

Query: 499 HMS-------EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
           +         E  ++           ++  F     A + G+PP GG+  GIDR++MLL 
Sbjct: 422 NDPIDQRGRFEDQVRKRELGDDEACEMDEDF---LNALEVGLPPTGGLGIGIDRVIMLLT 478

Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
            +  +R+V LFP  +   D    +   V  ++++
Sbjct: 479 NSTTIRDVLLFPTMKPLRDGSSEADEEVEKKEVK 512


>gi|218702794|ref|YP_002410423.1| lysyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218372780|emb|CAR20658.1| lysine tRNA synthetase, inducible [Escherichia coli IAI39]
          Length = 505

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHEEFDAKDNQELEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 426 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|170682016|ref|YP_001746526.1| lysyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|170519734|gb|ACB17912.1| lysyl-tRNA synthetase LysU [Escherichia coli SMS-3-5]
          Length = 505

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 141/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L           +  +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHDEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 426 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|256019775|ref|ZP_05433640.1| lysyl-tRNA synthetase [Shigella sp. D9]
          Length = 505

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESVGITVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESVGITVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 426 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|145639268|ref|ZP_01794874.1| lysyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145271571|gb|EDK11482.1| lysyl-tRNA synthetase [Haemophilus influenzae PittII]
          Length = 502

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 70/299 (23%), Positives = 132/299 (44%), Gaps = 20/299 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G++ + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W
Sbjct: 54  GEI-LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTW 112

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L   G ++            T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 113 DL---GDIIGVKGTLF--KTKTDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +    +  + R++++  +R   I++ F+E  TP+L        AR F+      
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNAL 226

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  
Sbjct: 227 DVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYH 284

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           D+++  E +LR +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 285 DLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDL 343



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 12/180 (6%)

Query: 396 GDSCFFIAGDPLKFCSFAADA-RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            D+      D         D  R    A+ LGI     +    I++   +E   E   I 
Sbjct: 326 HDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQ 384

Query: 454 FAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                F M      S     ND       +++L   G EI +G    + +E   + F   
Sbjct: 385 PT---FLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQ 441

Query: 512 GISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 442 VTAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|289450735|ref|YP_003475258.1| lysine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289185282|gb|ADC91707.1| lysine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 660

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 80/325 (24%), Positives = 134/325 (41%), Gaps = 25/325 (7%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTHSC ++     +  G  V+++G +   R  G + F D+ D +G  Q+    D    E 
Sbjct: 42  RTHSCEEICRDFANLEGKRVKIAGRIMSKRGMGKVSFCDLNDKFGHIQIFTKIDLLGEEA 101

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K     W     G  +    E +      G+I +      +LS +   PLP        
Sbjct: 102 YKE----WQKLDIGDWVGIDGEVM--RTQRGEISIRNYGYVLLSKSIR-PLPEKFHGLQD 154

Query: 122 ESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
              R++ R+LDL  +   +    KR+ II ++R  +   +F+E  TPIL        AR 
Sbjct: 155 MDTRYRRRYLDLIVNPEVRQTFAKRSIIIRTLRNYLDNIDFLEVETPILNVIPGGAAARP 214

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  G DR ++I   FR+E   +   P EF  L++
Sbjct: 215 FITHHNAMNIDLY-LRIAPELYLKRLIVGGMDRVYEIGRQFRNEGMDTKHNP-EFTLLEL 272

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY-GTD 289
             +F +   ++   E ++           TV+           F R+   DA+ +Y G D
Sbjct: 273 YQAFTDYKGMMELTETLIYECAMAACGKTTVTWRGVDVDLKPPFRRLTMRDAVLQYSGVD 332

Query: 290 KPDLRN-PIIMHNVTEHFVHSEFRV 313
              +++ P  +   TEH +  E  +
Sbjct: 333 FDQIKDLPAAVAVATEHNLPVEPGM 357



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 4/135 (2%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           F  +     E K+      +  P       K          +++L   G E A+     +
Sbjct: 363 FNLFFETYVEDKLVQPTFIYDYPIEISPLTKKKPGRPELTERFELFICGAEFANAYSELN 422

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F      +E+ +            A + G+PP GG+  GIDR+ MLL  +++
Sbjct: 423 DPIDQRERFKAQLRKRELGDEEANRMDEDYCMALEYGLPPTGGMGMGIDRLTMLLTDSES 482

Query: 556 VREVSLFPMSQNFCD 570
           +R+V LFP  +   D
Sbjct: 483 IRDVLLFPTMKPLSD 497


>gi|332280912|ref|ZP_08393325.1| lysyl-tRNA synthetase [Shigella sp. D9]
 gi|332103264|gb|EGJ06610.1| lysyl-tRNA synthetase [Shigella sp. D9]
          Length = 514

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 51  RDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 110

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 111 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 164

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 165 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 224

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 225 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 282

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 283 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 328

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 329 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESVGITVEKSWGLGRIVTEIFDEV 388

Query: 348 ARSQ 351
           A + 
Sbjct: 389 AEAH 392



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +         P       + ND+      +++    G EI +G    + +E   + F
Sbjct: 390 EAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAERF 449

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K   ++           A + G+PP  G+  GIDR++ML   +  +R+V LFP 
Sbjct: 450 QEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFPA 509

Query: 565 SQ 566
            +
Sbjct: 510 MR 511


>gi|305662513|ref|YP_003858801.1| aspartyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304377082|gb|ADM26921.1| aspartyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 435

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 82/312 (26%), Positives = 145/312 (46%), Gaps = 26/312 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y+T  C D+    VGS V L+GWVH++R  GG  F+ +RD  G  Q+  + DS   E+ K
Sbjct: 5   YKTVQCKDIVKDMVGSSVVLAGWVHQIRDLGGKKFIILRDGSGFVQITISKDSVNEEVLK 64

Query: 64  ---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGERE 119
               +  E V+ + G+V                +E+   +I IL++A + LPL V G+  
Sbjct: 65  ISEELTYESVVQVKGVVKEDPR-------APRGVEIVPSEIRILNLASKPLPLDVSGKVS 117

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R + R LDLRR+ +   +      +  +R  + +  FIE  TP + A++ EG  +
Sbjct: 118 ADLDTRLRERVLDLRRNEMRAIVRIADTTLRVIRDTLRSMGFIEVFTPKIIATATEGGAN 177

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + +F A  Q+PQ YK+ L+A+  +R F+I P +R E+  +     EF  +D+
Sbjct: 178 LFPVIYFGREAFLA--QSPQLYKE-LLAASLERVFEIGPAWRAEESDTPYHLAEFISVDI 234

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF------------LRICYDDAIRRYG 287
           E +F++ +D++  +E ++  +       +                   RI Y +AI    
Sbjct: 235 EAAFMDYEDVMKILEKLIEQILTTLRKEHEDDLKILKHELPSISIPLPRIKYTEAIEILQ 294

Query: 288 TDKPDLRNPIIM 299
            +  +++    +
Sbjct: 295 NEGFNIKFGDDL 306



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 34/159 (21%)

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                  I  EL           +I +FP                 +T P      L   
Sbjct: 311 LRALSLKIGHEL----------YFITEFP-----------TKIRAFYTKPMDSNPEL--- 346

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                 +  +DLV    E+ASG  R H  +++++A  + G++       F    + F  G
Sbjct: 347 ------SESFDLVWRHIELASGSSRIHKKDMLIEALKSRGLNV----ENFQYFIKWFDYG 396

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           MPPH G   G  R++++L G  NV+EV+LFP  +     
Sbjct: 397 MPPHAGWGLGFSRLLLMLTGRSNVKEVTLFPRDKKRLTP 435


>gi|225016227|ref|ZP_03705419.1| hypothetical protein CLOSTMETH_00130 [Clostridium methylpentosum
           DSM 5476]
 gi|224950985|gb|EEG32194.1| hypothetical protein CLOSTMETH_00130 [Clostridium methylpentosum
           DSM 5476]
          Length = 502

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 84/377 (22%), Positives = 146/377 (38%), Gaps = 31/377 (8%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           T    ++        G  V L+G +   R  G   F+D+RD+ G  Q     D+   E  
Sbjct: 46  TAYANEIIEHFDEMEGKVVSLAGRMMSKRGMGKASFVDLRDNTGRLQSYVRIDAVGEETY 105

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +S +   +  I G+      E        G+I + A KI  L     LPLP         
Sbjct: 106 QSFKKWDIGDIIGI------EGEVFRTHKGEISIKASKIT-LLSKSLLPLPEKWHGLRDT 158

Query: 123 SIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDF 180
             R++ R++DL  +  +    VKR+RII  +R  +  E F+E  TP+L   +    AR F
Sbjct: 159 DTRYRQRYVDLIVNPDVKDTFVKRSRIITEIRRFLDGEGFLEVETPVLHNIAGGASARPF 218

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y +  A + + + L+  GFDR ++I   FR+E   +   P EF  L++ 
Sbjct: 219 ITHHNALNIDMY-MRIALELHLKRLIVGGFDRVYEIGRVFRNEGTDTKHNP-EFTLLELY 276

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ + + +++  E +++ V +      T               +YG  + DL  P    
Sbjct: 277 QAYTDYEGMMDITERMIKTVAQNVLGTTT--------------VQYGEHEIDLGKPFTRI 322

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +T+         FS+I ++     +               D +N +     +  L  I 
Sbjct: 323 TMTDAVKQYSGVDFSQIETLEEARAIAKEHHIEFEDRHLKGDILNLFFDEYVEDKL--IQ 380

Query: 361 WRLDESGNVAGMGPVAK 377
                   V  + P+AK
Sbjct: 381 PTFITDYPVE-ISPLAK 396



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 59/159 (37%), Gaps = 30/159 (18%)

Query: 417 RNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           R+     L +     +     +  +I D+P  E +   K+                  K 
Sbjct: 359 RHLKGDILNLFFDEYVEDKLIQPTFITDYPV-EISPLAKR------------------KP 399

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYR 527
           +D       +++L   G E A+     +        F +    K+  ++           
Sbjct: 400 SDP--TMTERFELFILGREHANAFSELNDPIDQKGRFEHQVELKKAGDDEAADMDTDYIT 457

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + GMPP GG+  GIDR+VMLL     +R+V LFP  +
Sbjct: 458 ALEYGMPPTGGLGIGIDRLVMLLTNNDCIRDVLLFPTMK 496


>gi|312144280|ref|YP_003995726.1| lysyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904931|gb|ADQ15372.1| lysyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 491

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 69/316 (21%), Positives = 135/316 (42%), Gaps = 30/316 (9%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
           TH   ++           V+L+G +  +R HG   F D+ D     Q+    ++     +
Sbjct: 36  THHAAEIEKNYEELEDKEVKLAGRLMAIRTHGKASFADLMDMTSKVQLYIKQNNVGEDRY 95

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E  +++    ++ I G V              G++ ++    E+L+ A   PLP      
Sbjct: 96  EFFQNLDLGDIIGITGTV---------FKTRRGEVSINVSSFELLTKALR-PLPEKFHGL 145

Query: 120 YPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
             + IR++ R+LDL  +  + +  V R++II  MR  +  + F+E  TP++   +    A
Sbjct: 146 KDKDIRYRQRYLDLIVNPDVKETFVIRSKIIREMRNFLEEKGFLEVETPMMHPIAGGATA 205

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R F+          Y L  AP+ Y + L+  GF++ F+I   FR+E       P EF  L
Sbjct: 206 RPFVTHHNTLDMDLY-LRIAPELYLKRLIVGGFEKVFEINRNFRNEGMSYKHNP-EFTTL 263

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY-G 287
           ++  +  +  D++   EN++  + ++  +   V            + RI   +A++ Y G
Sbjct: 264 ELYQAQADYHDMMELTENLIYSLSKKVLDKTVVEYEGTELDLTTPWRRITMVEAVKEYAG 323

Query: 288 TDKPDLRNPIIMHNVT 303
            D  ++ +    + + 
Sbjct: 324 VDFTEIDSAAEAYELA 339



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 6/152 (3%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A  +GI       +  +++   +E   EEK I          +    + K  D     
Sbjct: 337 ELANSIGIKPEEGLSYGEVLN-EIFEERVEEKLIQPTFVMDYPIEVSPLAKKIAD-DPRF 394

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMP 534
            ++++    G EIA+     +  E     F      +E  +           RA + GMP
Sbjct: 395 TYRFEGFIYGREIANAFSELNDPEEQKSRFEKQVEMREAGDEEAQMMDFDFIRALEYGMP 454

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P GG+  GIDR++MLL  + ++R+V LFP  +
Sbjct: 455 PTGGLGIGIDRLIMLLTDSSSIRDVILFPTMR 486


>gi|317486635|ref|ZP_07945452.1| lysyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316922018|gb|EFV43287.1| lysyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 527

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 60/315 (19%), Positives = 121/315 (38%), Gaps = 31/315 (9%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           +TH  G +             ++      +G +   R  G + F  + D  G  Q  A+ 
Sbjct: 65  KTHDAGAIRAEYEACSATELEELNESFTCAGRIISHRSFGKVAFFHLMDRSGRIQCYASK 124

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  K  +   +  I G+              T ++ L+  ++ +L+ +    LP 
Sbjct: 125 DLMGEEAYKHFKKFDIGDIVGVH------GKLFRTKTDELTLACDQVTLLTKS-FRSLPE 177

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
             +      IR++ R++DL  +  +     KR++II + R  +    F+E  TP+L   +
Sbjct: 178 KHKGLTNVEIRYRQRYVDLITNPKVRDIFRKRSKIIRTFRAFLEERGFVEVETPMLHPVA 237

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  AP+ Y + L+  GF++ F++   FR+E       P 
Sbjct: 238 GGAAARPFITHHNALDMELY-MRIAPELYLKRLLVGGFEKVFELNRNFRNEGISIRHNP- 295

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG----------NTVSNNFLRICYDDA 282
           EF   +   ++    D+++  E +   +  E              +     + R+ + ++
Sbjct: 296 EFTMCEFYWAYATFYDLMDLTEELFSTIATEVCGSPIITYQGTELDLTPGKWQRLTFHES 355

Query: 283 IRRYGTDKPDLRNPI 297
           + + G   P+  N  
Sbjct: 356 LEKIGGHSPEFYNDF 370



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 11/129 (8%)

Query: 442 FYEWNEEEKKIDFA---HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            ++ + E K +      H P  +      +    D       +++L   G E  +     
Sbjct: 397 LFDLDVEPKLVAPTFIYHYPTEISPLARRNKDNPD----ITDRFELFIMGREYGNAFSEL 452

Query: 499 HMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +        F      K   ++          RA + GMPP  G   GIDR+VMLL  + 
Sbjct: 453 NDPIDQRMRFEQQVREKAAGDDEACAMDEDYLRALEYGMPPAAGEGIGIDRLVMLLTDSP 512

Query: 555 NVREVSLFP 563
           ++REV  FP
Sbjct: 513 SIREVIFFP 521


>gi|256025006|ref|ZP_05438871.1| lysyl-tRNA synthetase [Escherichia sp. 4_1_40B]
          Length = 505

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 139/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A   
Sbjct: 380 AEVH 383



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEVHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 426 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|261855043|ref|YP_003262326.1| lysyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261835512|gb|ACX95279.1| lysyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 511

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 80/362 (22%), Positives = 135/362 (37%), Gaps = 40/362 (11%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R  S  +L                  V ++G V   R  G   FL I DH G  Q+    
Sbjct: 50  RDASAAELQAEYAEKEADYFEQNPRRVVVAGRVMAKRLMGKASFLSILDHSGRIQLYVAR 109

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+         ++  +  I G       E        G++ +    I +L+ +   PLP 
Sbjct: 110 DALGEATYDDFKTWDIGDIVG------GEGALFKTQKGELSVRVDSIRLLTKSLR-PLPD 162

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R++DL  +   ++  + RT+II  MR  + A++F+E  TP++    
Sbjct: 163 KFHGMSDTEQRYRQRYVDLIMNEPVRDTFRKRTQIIQFMRNYLNAKDFLEVETPMMHVIP 222

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           Y L  AP+ Y + L+  GF+R ++I   FR+E   +   P 
Sbjct: 223 GGASAKPFTTFHNALDMDLY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGLSTRHNP- 280

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  ++   ++ +  D+++  E++LR + E      T++              Y   + D
Sbjct: 281 EFTMIEFYQAYADYIDLMDMTEDLLRRLSESVCGSTTLT--------------YQGVEFD 326

Query: 293 LRNPIIMHNVT----EHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-GGNRAFCDRMNEW 347
           L  P    +V     EH         S I S     E   I  K   G  +   +   E 
Sbjct: 327 LAQPFARLSVVNAILEHNPDVTREQLSDIDSARRIAEGLGINIKDSYGLGKIQIEIFEET 386

Query: 348 AR 349
           A 
Sbjct: 387 AE 388



 Score = 94.0 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 12/174 (6%)

Query: 401 FIAGDPLKFCSFAAD---ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN 457
            +  +P       +D   AR  IA+ LGI   + +    I     +E   E K I     
Sbjct: 340 ILEHNPDVTREQLSDIDSAR-RIAEGLGINIKDSYGLGKI-QIEIFEETAEHKLIQPTF- 396

Query: 458 PFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
             T     +  L + +D       +++    G EIA+G    + +E   + F      K+
Sbjct: 397 -ITEYPAEVSPLARRSDDNPFVTDRFEFFIGGREIANGFSELNDAEDQAERFMAQVAEKD 455

Query: 517 VVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             ++          RA + GMPP  G   GIDR+VM L  + ++R+V LFP  +
Sbjct: 456 AGDDEAMHFDSDYIRALEHGMPPTAGEGIGIDRLVMFLTDSPSIRDVLLFPHMR 509


>gi|153815948|ref|ZP_01968616.1| hypothetical protein RUMTOR_02193 [Ruminococcus torques ATCC 27756]
 gi|145846767|gb|EDK23685.1| hypothetical protein RUMTOR_02193 [Ruminococcus torques ATCC 27756]
          Length = 576

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 66/301 (21%), Positives = 128/301 (42%), Gaps = 19/301 (6%)

Query: 27  VHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETIN 86
           +   R  G   F +++D  G  Q     DS   E  K  +   V  + G+      E   
Sbjct: 1   MMSKRVMGKASFCNVQDLKGNIQSYVARDSIGEENYKEFKKLDVGDVIGI------EGEV 54

Query: 87  ANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKR 145
               TG+I + A  + +LS + ++ LP          +R++ R++DL  +   K+  +KR
Sbjct: 55  FKTKTGEISIHASHVTLLSKSLQI-LPEKFHGLTNTDMRYRQRYVDLIMNPEAKDTFIKR 113

Query: 146 TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
           ++II+++R  +  E F+E  TP+L A++   A                L  + + Y + L
Sbjct: 114 SKIISAIRRYLDGEGFMEVETPMLVANAGGAAARPFETHFNALNEDLKLRISLELYLKRL 173

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           +  G +R ++I   FR+E   +   P EF  +++  ++ + + +++  EN+ R V +E  
Sbjct: 174 IVGGLERVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMMDLTENLYRHVAQEVL 232

Query: 266 NGNTVSNN---------FLRICYDDAIRRY-GTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
               +  N         F RI   DA+++Y G D  +++       + +           
Sbjct: 233 GTTKIVYNGVEMDLGKPFERITMVDAVKKYAGVDWNEVKTLEEARKLADEHHVEYEEHHK 292

Query: 316 K 316
           K
Sbjct: 293 K 293



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 11/136 (8%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F M     +  L      + +   +++   NG+E+A+     +
Sbjct: 300 FFEEFAEEHLIQPT---FVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAYSELN 356

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F          +            A + GMPP GGI  GIDR+ MLL  +  
Sbjct: 357 DPIDQRERFKAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTNSAA 416

Query: 556 VREVSLFP--MSQNFC 569
           +R+V LFP   +Q   
Sbjct: 417 IRDVLLFPTMKTQGGA 432


>gi|167516606|ref|XP_001742644.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163779268|gb|EDQ92882.1| predicted protein [Monosiga brevicollis MX1]
          Length = 649

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 93/561 (16%), Positives = 177/561 (31%), Gaps = 110/561 (19%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
                   V ++G ++  R  G  + F D+       QV+A        I        +L
Sbjct: 52  NAEQSADEVSIAGRIYLKRESGQKLRFYDLHSEGEKIQVMAEFSKHDNSIIPFADIHDIL 111

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
               ++  R           G++ ++  +I++LS      LP           RF+ R+L
Sbjct: 112 RRGDIIGVRGHPV---RTQRGELSIAPVEIQLLSPCLR-VLPHQHFGITDMETRFRQRYL 167

Query: 132 DLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL  +    +N + R +II  +R  +    F+E  TP++   +        V    +   
Sbjct: 168 DLMVNSKARENFITRAKIITYLRRFLDNMGFLEVETPMMNQIAGGATAKPFVTHHNDLNL 227

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              +  AP+ Y ++L+  G+DR ++I   FR+E       P EF   +  M++ + +D++
Sbjct: 228 DLFMRVAPELYLKMLVVGGYDRVYEIGRQFRNEQIDLTHNP-EFTSCEFYMAYADYEDLM 286

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
              E +L G+         +               Y  + PD                  
Sbjct: 287 EVTEQLLAGLVLSIKGSYKIK--------------YHPNGPDGEE--------------- 317

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
                +I    P   +  I       NR F                              
Sbjct: 318 ----HEIDFTPPFRRISMIEGLEQALNRKF------------------------------ 343

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
              P A+  +   T      L  + G  C               +           +   
Sbjct: 344 ---PSAEQFDSEETRVFLDNLCTELGVDCSAPRTTSRLTDKLVGEY----------LESQ 390

Query: 431 CFEFCWIMDF-----PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
                +I D      P  +W+  +  +      F M +    +    +   I+  +++  
Sbjct: 391 AINPTFICDHPQIMSPLAKWHRSKPGMTERFELFVMTKELCNAYTELNDPVIQRERFE-- 448

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
                           ++  +A        +  ++   G  +A + G+PP  G   G+DR
Sbjct: 449 ---------------QQMQDKAA-----GDDEAQDIDEGFIKALEHGLPPTAGWGIGLDR 488

Query: 546 IVMLLLGAKNVREVSLFPMSQ 566
           + M L  + N++EV LFP  +
Sbjct: 489 LAMFLTDSNNIKEVLLFPAMR 509


>gi|300718199|ref|YP_003743002.1| Lysyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299064035|emb|CAX61155.1| Lysyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 506

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 76/366 (20%), Positives = 136/366 (37%), Gaps = 43/366 (11%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H    L     G            V ++G +   R  G   F+ ++D  G  Q+  + 
Sbjct: 42  RDHISEQLHAEYDGRENEELEALGIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     I      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLAEGIYNEQFKKWDL---GDIVGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +     R++I+  +R  M+   F+E  TP++    
Sbjct: 156 KFHGLADQETRYRQRYLDLIANEESRKTFKIRSQIMAGIRSFMVGREFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   
Sbjct: 216 GGASARPFTTHHNALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGI-SPRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++                   +  YG  + D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGNT--------------VVPYGEQEFD 319

Query: 293 LRNPIIMHNVTEHFVHS-------EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
              P     + E  +         +   F K  ++     +     K  G  R   +   
Sbjct: 320 FGKPFDKLTMKEAILKYRPETNLADLDDFDKAAAIAQSLGIKI--EKSWGLGRLVTEIFE 377

Query: 346 EWARSQ 351
           E A S 
Sbjct: 378 ETAESH 383



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 66/203 (32%), Gaps = 21/203 (10%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
                 P  K          R   ++ D D       D     + +   +   +  LG +
Sbjct: 317 EFDFGKPFDKLTMKEAILKYRPETNLADLDDF-----DKAAAIAQSLGIKIEKSWGLGRL 371

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
               FE               E  +         P       + ND       +++    
Sbjct: 372 VTEIFE------------ETAESHLIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIG 419

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGI 543
           G EI +G    + ++   + F     +K+  ++           A + G+PP  G+  GI
Sbjct: 420 GREIGNGFSELNDAQDQAERFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGI 479

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR+VML   +  +R+V LFP  +
Sbjct: 480 DRMVMLFTNSHTIRDVILFPAMR 502


>gi|304405774|ref|ZP_07387432.1| lysyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304345017|gb|EFM10853.1| lysyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 505

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 69/359 (19%), Positives = 142/359 (39%), Gaps = 35/359 (9%)

Query: 5   RTHSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R+H   D+  +   +           V L+G + + R  G   F  I+D  G  Q+ A  
Sbjct: 42  RSHVAKDILDAHEETTKEELESQQIEVALAGRIMQKRGMGKASFAHIQDLTGKIQIYARK 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+       +     +  I G+        +     TG+  + A++I +L+ +  LPLP 
Sbjct: 102 DTLSETEYAAFDLLDIGDIVGV------RGVVFKTNTGETSVKAKEIVVLTKSL-LPLPD 154

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                    +R++ R++DL  +  + +  + R+RII SMR  + +  ++E  TP L A +
Sbjct: 155 KHHGLKDVELRYRQRYVDLITNPDVQQTFIARSRIIQSMRRYLDSLGYLEVETPTLHAIA 214

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   +R+E   +   P 
Sbjct: 215 GGASARPFITHHNALDMQLY-MRIAIELHLKRLIVGGLEKVYEIGRVYRNEGISTRHNP- 272

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  DI+   EN+++ + +E                   +  Y   + D
Sbjct: 273 EFTMIELYEAYADYKDIMALTENLVKHIAQEVLGTT--------------VIDYQGSEVD 318

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           L  P    ++ +    +    F+  +S    +E           + A    +N +    
Sbjct: 319 LGTPWRRVSMVDLVKEATGVDFAAQISNEEAHEAARQHKVPVEKHWAAGHILNAFFEQF 377



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 4/104 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
           K N+       +++L     E A+     +      + F    + +E             
Sbjct: 400 KKNEQDPRFTDRFELFIVAREHANAFTELNDPIDQRERFEAQLLEREHGNDEAHEMDDDF 459

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            RA + GMPP GG+  GIDR+VMLL    ++R+V LFP  ++  
Sbjct: 460 IRALEYGMPPTGGLGIGIDRLVMLLTNQPSIRDVLLFPHMRHRA 503


>gi|238896430|ref|YP_002921168.1| lysyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|262042531|ref|ZP_06015688.1| lysine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|330010997|ref|ZP_08306941.1| lysine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|238548750|dbj|BAH65101.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259040091|gb|EEW41205.1| lysine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|328534334|gb|EGF60945.1| lysine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 505

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 136/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHADFDGKENEELEALNVEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G +++   +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLAEGVYNDQFKKWDL---GDIIAARGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +   K R++I+  +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRKTFKVRSQILAGIRQFMVGRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V               YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGNTEVP--------------YGDQVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        +E        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 70/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   +M D D+      D  K  + +   +   +  LG I    FE
Sbjct: 323 PFEKLTMREAIKKYRPETEMADLDNF-----DSAKAIAESIGIKVEKSWGLGRIVTEIFE 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F +   +K   ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFQDQVDAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|172056108|ref|YP_001812568.1| lysyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171988629|gb|ACB59551.1| lysyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 497

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 73/381 (19%), Positives = 153/381 (40%), Gaps = 30/381 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y  H   +L  +++   V ++G V   R  G + F +++D  G  Q+    D    E  +
Sbjct: 46  YGEHEKEEL--AELKPDVSIAGRVMTTRRKGKVGFTNVQDVNGQIQLYVRKDDVGEEAYE 103

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             ++  +    G ++  S      N+  G++ +      +L+ A   PLP          
Sbjct: 104 IYKTCDL----GDIVGISGYVFKTNV--GELSVHVTSFTLLTKALR-PLPDKYHGLKDVE 156

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFL 181
            R++ R+LDL  +T  +     R+++I  +R  + +  ++E  TP+L   +    AR F+
Sbjct: 157 QRYRQRYLDLITNTESRETFIARSKVIRGIRQYLDSLGYLEVETPMLHTIAGGASARPFI 216

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                   + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  
Sbjct: 217 THHNALDMTLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP-EFTMIELYE 274

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ + +DI+N  EN++  V +E      V+              YG D  DL       +
Sbjct: 275 AYADYNDIMNLTENLIAHVAQEVLGTTQVT--------------YGEDVIDLSVGWKRAH 320

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           + +    +    F + +S    +E+          +      +NE+   + +  L    +
Sbjct: 321 MADLVKEATGVDFFEEISKERAHELAHEHGVEVQAHMTTGHILNEFFEQKIEESLVQPTF 380

Query: 362 RLDESGNVAGMGPVAKHLNIV 382
                G+   + P+AK     
Sbjct: 381 VY---GHPVEISPLAKKNPED 398



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  +      +  P       K N        +++L     E A+     +  
Sbjct: 366 FFEQKIEE-SLVQPTFVYGHPVEISPLAKKNPEDPRFTDRFELFIVRREHANAFTELNDP 424

Query: 502 EVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F    + KE               A + GMPP GG+  GIDR+VMLL  A ++R
Sbjct: 425 IDQRERFEAQLVEKEAGNDEAHEMDNDFIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIR 484

Query: 558 EVSLFPMSQN 567
           +V LFP  ++
Sbjct: 485 DVLLFPTMRH 494


>gi|170766869|ref|ZP_02901322.1| lysyl-tRNA synthetase LysU [Escherichia albertii TW07627]
 gi|170124307|gb|EDS93238.1| lysyl-tRNA synthetase LysU [Escherichia albertii TW07627]
          Length = 505

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQDVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 426 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|238763212|ref|ZP_04624177.1| Lysyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238698485|gb|EEP91237.1| Lysyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 505

 Score =  211 bits (536), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 75/357 (21%), Positives = 143/357 (40%), Gaps = 35/357 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y +    +L   ++   V ++G +   R  G   F+ ++D  G  Q+  + D     +  
Sbjct: 53  YGSKENEELEALNI--EVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYN 110

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++    +       TG++ +   ++ +L+ A   PLP        + 
Sbjct: 111 EEFKKWDL---GDILGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQE 164

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL  +   +N  K R++++  +R  M+ + F+E  TP++        AR F+
Sbjct: 165 TRYRQRYLDLIANDESRNTFKVRSQVMAGIRSFMVEKGFMEVETPMMQVIPGGASARPFV 224

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M
Sbjct: 225 THHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYM 282

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E + R + E+                  ++ +YG    D   P     
Sbjct: 283 AYADYKDLIVLTEELFRTLTEKVLG--------------SSVVQYGDQTFDFGKPFAKLT 328

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351
           + E          + +  ++   +  AI         K  G  R  C+   E A S 
Sbjct: 329 MKEAICKYRPE--TNVADLDDMDKAVAIAESLGIKVEKSWGLGRVQCEIFEETAESH 383



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 69/202 (34%), Gaps = 21/202 (10%)

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
                   P AK          R   ++ D D       D     + +   +   +  LG
Sbjct: 315 DQTFDFGKPFAKLTMKEAICKYRPETNVADLDDM-----DKAVAIAESLGIKVEKSWGLG 369

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
            + C  FE               E  +         P       + ND       +++  
Sbjct: 370 RVQCEIFE------------ETAESHLIQPTFITEYPAEVSPLARRNDDNPEITDRFEFF 417

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAA 541
             G EI +G    + +E   Q F++   +KE  ++           A + G+PP  G+  
Sbjct: 418 IGGREIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGI 477

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           GIDR+VML   +  +R+V LFP
Sbjct: 478 GIDRMVMLFTNSHTIRDVILFP 499


>gi|315644404|ref|ZP_07897544.1| lysyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315280281|gb|EFU43573.1| lysyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 503

 Score =  210 bits (535), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 68/343 (19%), Positives = 137/343 (39%), Gaps = 27/343 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L    V   V L+G +   R  G   F  I+D  G  Q+    DS      ++     +
Sbjct: 60  ELEEKQV--EVNLAGRIMAKRGMGKASFAHIQDLSGRVQIYVRQDSVAEAQYEAFSILDL 117

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             I G+      + +     TG+  +  +++E+LS +   PLP          +R++ R+
Sbjct: 118 GDIIGV------KGVLFKTKTGETTVKVKELEVLSKSL-YPLPEKFHGLKDVELRYRQRY 170

Query: 131 LDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           +DL     + K  + R+RII SMR  + +  ++E  TP L + +    AR F+       
Sbjct: 171 VDLIINPDVQKTFITRSRIIQSMRRYLDSLGYLEVETPTLHSIAGGAAARPFITHHNALD 230

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  A + + + L+  G ++ ++I   +R+E   +   P EF  +++  ++ +  D
Sbjct: 231 MELY-MRIAIELHLKRLIVGGLEKVYEIGRVYRNEGISTRHNP-EFTMIELYEAYADYKD 288

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I+   EN++  + +E      +S     +      RR           + M +  +  V 
Sbjct: 289 IMALTENLIAHIAQEVLGTQVISYQGHEVDLTPQWRR-----------VSMVDAVKEIVG 337

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
            +F V       +   +   +P +    +  F   +N +    
Sbjct: 338 VDFGVEMSNEEAHRLAKEHKVPVE---PHMTFGHILNAFFEQF 377



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 5/130 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  I          +    + K ND+      +++L     E A+     +  
Sbjct: 373 FFEQFVEETLIQPTFVTGHPVEISPLA-KKNDVDPRFTDRFELFIVAREHANAFSELNDP 431

Query: 502 EVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               Q F      KE              RA + GMPP GG+  GIDR++MLL  A ++R
Sbjct: 432 IDQRQRFEAQMKEKEQGNDEAHEMDEDFLRALEYGMPPTGGLGIGIDRLIMLLTNAPSIR 491

Query: 558 EVSLFPMSQN 567
           +V LFP  +N
Sbjct: 492 DVLLFPHMRN 501


>gi|257058766|ref|YP_003136654.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256588932|gb|ACU99818.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 573

 Score =  210 bits (535), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 69/360 (19%), Positives = 140/360 (38%), Gaps = 35/360 (9%)

Query: 6   THSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--- 54
           TH+  +L           +V   V ++G +   R  G + F  ++D     Q+  +    
Sbjct: 45  THTAANLQDKYATLKDGEEVDLEVAIAGRIIARRVFGKLAFFSLQDETATIQLYLDKQQI 104

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D++  E+  +  +   L   G ++             G++ +  Q   IL+ +  LPLP 
Sbjct: 105 DTSMTEVTDAFNTLKKLTDTGDILGVVGTIKRTE--KGELSVKVQTYTILTKSL-LPLPD 161

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRT-RIINSMRCRMIAENFIECSTPILTASS 173
                     R++ R++DL  +   +   +R  +I  S+R  +    FIE  TP+L + +
Sbjct: 162 KWHGLTDTEKRYRQRYVDLIVNPQVRQTFRRRAQITASIRRYLDENGFIEIETPVLQSEA 221

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  GF++ F++   FR+E   +   P 
Sbjct: 222 GGAEARPFITYHNTLDMELY-LRIATELHLKRLIIGGFEKVFELGRIFRNEGVSTKHNP- 279

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  D++   E ++    +       ++   + I      RR       
Sbjct: 280 EFTSIEVYQAYADYFDMMELTEALITNAAQAVLGTLKLTYQEIEIDLSTPWRR------- 332

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI------PAKGGGGNRAFCDRMNE 346
               + M ++ +     +F  F+   S     +   I      P+ G   N AF  ++ E
Sbjct: 333 ----VTMTDIVKEKTGLDFDSFTDFESAKEAAKKAGIDVPNDCPSLGKLMNEAFEQKVEE 388



 Score = 94.0 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 53/158 (33%), Gaps = 27/158 (17%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
           C       N   ++   +     +  +I+DFP      E   +   H             
Sbjct: 371 CPSLGKLMNEAFEQ--KVEETLIQPTFILDFPV-----EISPLAKPHR------------ 411

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
                      +++L   G E+A+            +        K       +      
Sbjct: 412 ----SKKGLVERFELYIVGRELANSFSELTDPIDQRERLEKQAEQKASGDLEAQGVDEDF 467

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A + GMPP GG+  GIDR+VMLL  + ++R+V  FP
Sbjct: 468 LTALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFP 505


>gi|210623237|ref|ZP_03293676.1| hypothetical protein CLOHIR_01626 [Clostridium hiranonis DSM 13275]
 gi|210153774|gb|EEA84780.1| hypothetical protein CLOHIR_01626 [Clostridium hiranonis DSM 13275]
          Length = 508

 Score =  210 bits (535), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 78/386 (20%), Positives = 151/386 (39%), Gaps = 32/386 (8%)

Query: 3   RY-RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           RY RTH    +     +  G  V+++G +   R  G   F+DI+D  G  Q     D   
Sbjct: 44  RYDRTHYSVQVKEGFEALEGETVKIAGRMMSKRIQGKAGFIDIQDAEGRIQSYVRKDRLG 103

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E     ++  +  I G+      E        G+I + A K+ +LS + ++ LP     
Sbjct: 104 DEEYTIFKTYDIGDIVGI------EGEVFITKRGEISVKADKVTLLSKSLQI-LPEKYHG 156

Query: 119 EYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + +R++ R++DL  +   K+  + RT+ + ++R  +    F+E  TPIL T +    
Sbjct: 157 LKDQELRYRQRYVDLIVNPEVKDAFITRTKALKALRSYLDERGFLEVETPILNTIAGGAN 216

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + Y + L+  GFD+ +++   FR+E       P E+  
Sbjct: 217 ARPFITHHNTLHIPMY-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDMKHNP-EYTA 274

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +++  ++ +  D++   EN++  + E  +    V      I +    +R           
Sbjct: 275 IELYQAYADFTDMMEIAENLIAHMAEVATGSTKVVYQGKEIDFKPPWKR----------- 323

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           + M    + +   +F   +         +   I  K G       + + E+    G+  L
Sbjct: 324 MTMIECVKEYSGVDFNEINTDEEAIAIAKEKGIEVKPG---MRRGEIIAEFFEEFGEDKL 380

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIV 382
               +       +    P++K  N  
Sbjct: 381 VQPTFITHHPVEI---SPLSKRNNED 403



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 14/157 (8%)

Query: 418 NHIAQELGI-INCNCFEFCWIMDFPFYEWNEEEKKIDFA---HNPFTMPQGGMESLKGND 473
             IA+E GI +         I +F  +E   E+K +      H+P  +      +    D
Sbjct: 348 IAIAKEKGIEVKPGMRRGEIIAEF--FEEFGEDKLVQPTFITHHPVEISPLSKRN--NED 403

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
                  +++   NG+E+A+     +        F +    KE+ ++           A 
Sbjct: 404 PR--LTDRFEAFANGWELANAFSELNDPIDQKGRFMDQLRKKELGDDEACDMDEDFLNAL 461

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + G+PP GG+  GIDR++MLL  + ++R+V LFP  +
Sbjct: 462 EVGLPPTGGLGIGIDRVIMLLTDSTSIRDVLLFPTMK 498


>gi|296104551|ref|YP_003614697.1| lysyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295059010|gb|ADF63748.1| lysyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 505

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 75/364 (20%), Positives = 135/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+  + 
Sbjct: 42  RDHTSDQLHADFDAKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     I      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGIYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +     R++I+  +R  M+  +F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRKTFKIRSQIMAGIRQFMVNRDFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V               YG +  D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGTTQVP--------------YGEEVFD 319

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEW 347
              P     + E             L      +  A        K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETNMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 57/329 (17%), Positives = 103/329 (31%), Gaps = 28/329 (8%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+   D +     +++        G   +  F+       +  Y    P+L    ++   
Sbjct: 197 FMVNRDFMEVETPMMQ-----VIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVVGG 251

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE-WARSQGQPGLAYIFW 361
            +          ++ +SV    E   +       +      + E   R+  Q  L     
Sbjct: 252 FDRVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGTTQV 311

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
              E        P  K       +  R   +M D D+      D  K  + +   +   +
Sbjct: 312 PYGEE-VFDFGKPFEKLTMREAIKKYRPETNMADLDNF-----DSAKAIAESIGIKVEKS 365

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
             LG I    FE               E  +         P       + ND       +
Sbjct: 366 WGLGRIVTEIFEEV------------AEAHLIQPTFITEYPAEVSPLARRNDENPEITDR 413

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHG 537
           ++    G EI +G    + +E   Q F +   +K   ++           A + G+PP  
Sbjct: 414 FEFFIGGREIGNGFSELNDAEDQAQRFQDQVDAKAAGDDEAMFFDEDYVTALEHGLPPTA 473

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+  GIDR+VML   +  +R+V LFP  +
Sbjct: 474 GLGIGIDRMVMLFTNSHTIRDVILFPAMR 502


>gi|148828360|ref|YP_001293113.1| lysyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|229559859|sp|A5UIX4|SYK_HAEIG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|148719602|gb|ABR00730.1| lysyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 502

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 70/299 (23%), Positives = 132/299 (44%), Gaps = 20/299 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G++ + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W
Sbjct: 54  GEI-LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDEVGTW 112

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L   G ++            T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 113 DL---GDIIGVKGTLF--KTKTDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +    +  + R++++  +R   I++ F+E  TP+L        AR F+      
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNAL 226

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  
Sbjct: 227 DVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYH 284

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           D+++  E +LR +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 285 DLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATVKYGADKGIVKEDL 343



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 10/153 (6%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+ LGI     +    I++   +E   E   I      F M      S     ND     
Sbjct: 353 AERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQPT---FLMAHPAEISPLARRNDENPDV 408

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMP 534
             +++L   G EI +G    + +E   + F     +KE  ++           A + G+P
Sbjct: 409 TDRFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           P  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|260581089|ref|ZP_05848910.1| lysyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|260092218|gb|EEW76160.1| lysyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 502

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 70/299 (23%), Positives = 132/299 (44%), Gaps = 20/299 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G++ + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W
Sbjct: 54  GEI-LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTW 112

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L   G ++            T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 113 DL---GDIVGIKGTLF--KTKTDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +    +  + R++++  +R   I++ F+E  TP+L        AR F+      
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNAL 226

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  
Sbjct: 227 DVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYH 284

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           D+++  E +LR +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 285 DLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATIKYGADKGIVKEDL 343



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 12/180 (6%)

Query: 396 GDSCFFIAGDPLKFCSFAADA-RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            D+      D         D  R    A+ LGI     +    I++   +E   E   I 
Sbjct: 326 HDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQ 384

Query: 454 FAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                F M      S     ND       +++L   G EI +G    + +E   + F   
Sbjct: 385 PT---FLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQ 441

Query: 512 GISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 442 VAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|152971836|ref|YP_001336945.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|150956685|gb|ABR78715.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 505

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 137/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHADFDGKENEELEALNVEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G +++   +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLAEGVYNDQFKKWDL---GDIIAARGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +   K R++I+  +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRKTFKVRSQILAGIRQFMVGRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGNTEVT--------------YGDQVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        +E        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 90.9 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 70/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   +M D D+      D  K  + +   +   +  LG I    FE
Sbjct: 323 PFEKLTMREAIKKYRPETEMADLDNF-----DSAKAIAESIGIKVEKSWGLGRIVTEIFE 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F +   +K   ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFQDQVDAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|295401954|ref|ZP_06811916.1| lysyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109229|ref|YP_003987545.1| lysyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294975956|gb|EFG51572.1| lysyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311214330|gb|ADP72934.1| lysyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 494

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 78/390 (20%), Positives = 149/390 (38%), Gaps = 38/390 (9%)

Query: 5   RTHSC-------GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH         GDL   ++      V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 34  RTHKAQELFDLYGDLSKEELEEKQIKVAVAGRIMTKRGKGKAGFAHIQDVTGQIQIYVRE 93

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  ++  +  I G+               G++ +     E L+ A   PLP 
Sbjct: 94  DAVGPEQYELFKTSDLGDIIGVC------GTVFKTKVGELSIKVSSYEFLTKALR-PLPE 146

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +   KN  + R+RII SMR  + +  ++E  TP++   +
Sbjct: 147 KYHGLKDIEQRYRQRYLDLIMNPDSKNTFITRSRIIQSMRRYLDSHGYLEVETPMMHNIA 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 207 GGAAARPFITHHNALDMPLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP- 264

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L++  ++ +  DI+   EN++  + +E      +     ++      +R       
Sbjct: 265 EFTMLELYEAYADFRDIMTLTENLIAHIAQEVLGTTKIQYGEHKVDLTPEWKRLH----- 319

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
                 M +  + +V  +   F K +S     E+          +  F   +NE+   + 
Sbjct: 320 ------MVDAIKEYVGVD---FWKQMSDEEARELAKEHGVEIAPHMTFGHIVNEFFEQKV 370

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
           +  L    +     G+   + P+AK     
Sbjct: 371 EDKLIQPTFIY---GHPVEISPLAKKNPDD 397



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 6/154 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E G+       F  I++  F+E   E+K I          +    + K  D    
Sbjct: 342 RELAKEHGVEIAPHMTFGHIVN-EFFEQKVEDKLIQPTFIYGHPVEISPLAKKNPD-DPR 399

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
              +++L   G E A+     +      + F      +E               A + GM
Sbjct: 400 FTDRFELFIVGREHANAFTELNDPIDQRERFEAQLKEREQGNDEAHEMDEDFIEALEYGM 459

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  G+DR+VMLL  + ++R+V LFP  +N
Sbjct: 460 PPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMRN 493


>gi|171322227|ref|ZP_02911073.1| lysyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171092452|gb|EDT37798.1| lysyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 508

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 68/308 (22%), Positives = 121/308 (39%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL  +   S           V ++G +   R  G   F  ++D  G  Q    P+
Sbjct: 43  THHAADLQATFADSDKAALEANPVEVSVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPN 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +  +++ +LS A   PLP  
Sbjct: 103 DVGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVQCKELRLLSKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + +R++ R++DL            RTR I S+R  M   +F+E  TP+L     
Sbjct: 156 FHGLADQEMRYRQRYVDLIVTPETRDTFRARTRTIASIRKFMDNADFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T+            F R+    AI+
Sbjct: 274 FTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAQPFHRLTITQAIQ 333

Query: 285 RYGTDKPD 292
           +Y     D
Sbjct: 334 KYAPQYTD 341



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +  +     P       + +D       +++L   G EIA+G    +  
Sbjct: 378 LFEETAESQLWEPTY-IIDYPVEVSPLARASDTAPGITERFELFMTGREIANGFSELNDP 436

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      K+  +           RA + GMPP GG   GIDR+VMLL  +  +R
Sbjct: 437 EDQAARFKKQVEQKDAGDEEAMFFDADYIRALEHGMPPTGGCGIGIDRLVMLLTDSPTIR 496

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 497 DVLLFP 502


>gi|145627807|ref|ZP_01783608.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144979582|gb|EDJ89241.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 502

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 70/299 (23%), Positives = 131/299 (43%), Gaps = 20/299 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G++ + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W
Sbjct: 54  GEI-LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYKDDVGTW 112

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L   G ++            T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 113 DL---GDIVGVKGTLF--KTKTDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +    +  + R++++  +R   I++ F+E  TP+L        AR F+      
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNAL 226

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++    
Sbjct: 227 DVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYANYH 284

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           D+++  E +LR +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 285 DLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDL 343



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 12/180 (6%)

Query: 396 GDSCFFIAGDPLKFCSFAADA-RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            D+      D         D  R    A+ LGI     +    I++   +E   E   I 
Sbjct: 326 HDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQ 384

Query: 454 FAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                F M      S     ND       +++L   G EI +G    + +E   + F   
Sbjct: 385 PT---FLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQ 441

Query: 512 GISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 442 VAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|52078577|ref|YP_077368.1| lysyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52783938|ref|YP_089767.1| lysyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52001788|gb|AAU21730.1| lysyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52346440|gb|AAU39074.1| LysS [Bacillus licheniformis ATCC 14580]
          Length = 499

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 129/354 (36%), Gaps = 32/354 (9%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   DL           + +    V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 39  RTHQSTDLIESYNEFSKEELEEKAIEVTIAGRMMTKRGKGKAGFAHIQDLKGQIQIYVRK 98

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   E  +  +S  +  I G+        +      G++ + A   ++L+ A   PLP 
Sbjct: 99  DSVGEEQYEWFKSSDLGDIVGV------TGVMFKTNVGELSVKATSFDLLTKALR-PLPD 151

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +   KN  + R++II SMR  +    ++E  TP + A  
Sbjct: 152 KYHGLKDIEQRYRQRYLDLIVNPESKNTFITRSKIIQSMRRYLDDHGYLEVETPTMHAIP 211

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 212 GGASARPFITHHNALDMPLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP- 269

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  DI+   EN++  + +E                      Y  D   
Sbjct: 270 EFTMIELYEAYADYKDIMRLTENLIAHIAQEVLG-----------TTTVQYGDYEVDLKP 318

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
               + M +  +     +F     +       +   I    G       +   E
Sbjct: 319 EWKRLHMVDAVKEATGVDFWKEVSVEEARAYAKEHGIEISEGMSVGHIINEFFE 372



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  I      +  P       K N        +++L   G E A+     +  
Sbjct: 370 FFEQKVEETLIQPT-FIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDP 428

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +           A + GMPP GG+  GIDR++MLL  + ++R
Sbjct: 429 IDQKERFEAQLKEREEGNDEAHMMDEDFVEALEYGMPPTGGLGIGIDRLIMLLTNSPSIR 488

Query: 558 EVSLFPMSQNF 568
           +V LFP  ++ 
Sbjct: 489 DVLLFPQMRHR 499


>gi|169825711|ref|YP_001695869.1| lysyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|259511527|sp|B1HSY5|SYK_LYSSC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|168990199|gb|ACA37739.1| Lysyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 500

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 140/362 (38%), Gaps = 43/362 (11%)

Query: 5   RTHSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   ++                  V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 38  RTHLSTEVKEQFADQTKEQLEENLQEVIIAGRIMTKRGKGKAGFAHIQDLGGQIQIYVRQ 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +  I G+               G++ + A++   L+ A   P+P 
Sbjct: 98  DHVGEEAYELFKQADLGDIVGI------RGNVFRTQVGELSVKAEEFTFLTKALR-PMPE 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R+LDL  +   K   + R++II ++R  +    ++E  TP+L T +
Sbjct: 151 KFHGLQDVEQRYRQRYLDLMTNEDSKLTFIARSKIIRAIRNYLDNAGYLEVETPMLHTIA 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 211 GGAAARPFITHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  DI++  EN++  V +E     T               +YG D+ +
Sbjct: 269 EFTMIELYEAYADYQDIMSLTENLIAHVAQEVLGTTT--------------VQYGEDEIN 314

Query: 293 L---RNPIIMHNVTEHFVHSEFR-----VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           L      + M +  +     +F        ++ L+   G EV  +   G   N  F  ++
Sbjct: 315 LAVGWKRVHMVDAVKEATGVDFWQPMTKEQAQALAKEHGVEVKDVHEVGHIINEFFEQKI 374

Query: 345 NE 346
            E
Sbjct: 375 EE 376



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 6/154 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E G+   +  E   I++  F+E   EE  +      +  P       K N     
Sbjct: 346 QALAKEHGVEVKDVHEVGHIIN-EFFEQKIEET-LVQPTFVYGHPVEISPLAKKNPEDER 403

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGM 533
              +++L     E A+     +      Q F      K    +           A + GM
Sbjct: 404 FTDRFELFIVRREHANAFTELNDPIDQRQRFEAQLAEKAAGNDEAHEMDNDFIEALEYGM 463

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  GIDR++MLL  + ++R+V LFP  ++
Sbjct: 464 PPTGGLGIGIDRLIMLLTNSPSIRDVLLFPTMRH 497


>gi|213855685|ref|ZP_03383925.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
          Length = 486

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 74/345 (21%), Positives = 136/345 (39%), Gaps = 29/345 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L  
Sbjct: 61  LEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDL 174

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  K R++I+  +R  M+A  F+E  TP++        AR F+          
Sbjct: 175 ISNDESRNTFKTRSKILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV---- 307
             E++ R + ++      V               YG +  D   P     + E       
Sbjct: 293 LTESLFRTLAQDVLGTTQVP--------------YGDEVFDFGKPFEKLTMREAIKKYRP 338

Query: 308 HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQ 351
            ++        S     E   I   K  G  R   +  +E A + 
Sbjct: 339 ETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFDEVAEAH 383


>gi|168704919|ref|ZP_02737196.1| lysyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 553

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 96/553 (17%), Positives = 196/553 (35%), Gaps = 67/553 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSEWVLCID 74
           G  VR +G V R R  G +++ +I D  G  Q++   +       ++A+ +    ++ +D
Sbjct: 54  GPKVRAAGRVVRARTGGKLMWFEIWDQTGRVQLMVRVNKLTETEWQVAQLLDLGDIIGVD 113

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G               TG++ +  +K+  L+ + E P P        E  R ++R+LD+ 
Sbjct: 114 GEF---------GTTKTGELTIQVEKLTFLTKSLE-PHPKDVYGMGDEEYRLRHRYLDMV 163

Query: 135 -RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
                 +   +R +II ++R  + A+ ++E  TP L A +    AR F           +
Sbjct: 164 YTPDTLRRAHQRVKIIRTIRNHLDAQGYMEVETPTLHAIAGGAAARPFETHHNALDIDLF 223

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
               A +   + L+  G ++ +++   FR+E       P EF  L++  S+ +   +++ 
Sbjct: 224 V-RIALELPLKRLLVGGIEKVYELGRVFRNEGISRKHNP-EFTMLELYQSYGDYQTMMDL 281

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            E ++    +                    +     DK + +   + H V +       R
Sbjct: 282 TEGLIVACVDVVGP-----------TATVNLDEEYEDKGEKKTRAVPHRVYDLHGERHLR 330

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
              K+++ NP ++              + D   E          A +      +    G 
Sbjct: 331 FGEKVVNFNPPFQRA-----------KYGDLFKEHVGCDMTDEAAVLAAARAANIATEGK 379

Query: 373 GPVAKHLNIVNT--EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
                +   +N   + +   +                            + ++   +   
Sbjct: 380 DKTTNYAEKLNLAYKKVAQTVPADAQPPREITTPKAHVV------LVQELFEKF--VEDA 431

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
                ++ D+P                P T  +    ++     L +   +   + N + 
Sbjct: 432 LVGPVFVYDYP------------SPLCPLTKRKRENPAIAERFELYVHGME---LANAYT 476

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
             +  I    +     A  +   S   +++ F    RA + GMPP GG+  GIDR+VMLL
Sbjct: 477 ELNDPITQEQTFSQQLAGLSDDDSMAKMDHDF---IRALRHGMPPAGGLGIGIDRLVMLL 533

Query: 551 LGAKNVREVSLFP 563
              + +R+V LFP
Sbjct: 534 TNTQTIRDVILFP 546


>gi|323491012|ref|ZP_08096206.1| lysyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323395368|gb|EGA88220.1| lysyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 494

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 80/395 (20%), Positives = 150/395 (37%), Gaps = 44/395 (11%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   ++           + +    V ++G V   R  G   F  I+D  G  Q+    
Sbjct: 33  RTHLSQEIIEQYGEFSKEELEEASHEVVIAGRVMTKRGKGKAGFAHIQDLKGQIQIYVRK 92

Query: 55  D---SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
           D      +E   +V    +L I G V   +          G++ + A+++E L+ A   P
Sbjct: 93  DAIGDEAYEFYNTVDLGDILGIKGTVFKTNV---------GELSIKAKEVEFLTKALR-P 142

Query: 112 LPVFGEREYPESIRFKYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP           R++ R+LDL   +   +  + R+RII SMR  +  E F+E  TP+L 
Sbjct: 143 LPEKFHGLKDVEQRYRQRYLDLLTSEESKETFILRSRIIQSMRRYLDNEGFLEVETPMLH 202

Query: 171 ASSPEGAR-DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
           + +   A   F+          Y +  A + + + L+  G ++ ++I   FR+E   +  
Sbjct: 203 SIAGGAAAKPFITHHNALDMELY-IRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRH 261

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  L++  ++ + +DI+   EN++  + +E     T               +YG D
Sbjct: 262 NP-EFTMLELYEAYADYNDIMALTENLVAHIAQEVLGTTT--------------VQYGED 306

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
           + DL       ++ +         F K ++      +                 +NE+  
Sbjct: 307 QIDLAVGWKRLHMADAVKEYTGVDFWKHITKEEAQALAKEHGIEIKSTMEVGHILNEFFE 366

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
            + +  L    +     G+   + P+AK       
Sbjct: 367 QKVEEQLVQPTFIY---GHPVEISPLAKKNPEDER 398



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 6/153 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E GI   +  E   I++  F+E   EE+ +      +  P       K N     
Sbjct: 341 QALAKEHGIEIKSTMEVGHILN-EFFEQKVEEQ-LVQPTFIYGHPVEISPLAKKNPEDER 398

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGM 533
              +++L     E A+     +      Q F    + K    +           A + G+
Sbjct: 399 FTDRFELFIVRREHANAFTELNDPIDQRQRFEAQLVEKAEGNDEAHEMDEDFIEALEYGL 458

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG+  GIDR++MLL  + ++R+V LFP  +
Sbjct: 459 PPTGGLGIGIDRLIMLLTNSSSIRDVLLFPQMR 491


>gi|294795203|ref|ZP_06760337.1| lysine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294453995|gb|EFG22370.1| lysine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 505

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 20/286 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +  +R HG   F +IRD  G  QV    D    +  K V+   +  I G+ 
Sbjct: 57  GQPVVIAGRLMTIRSHGKTAFANIRDKSGDIQVYFRKDVLGEDAYKYVKMLDIGDIIGV- 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                E       TG++ +   K+ +LS +   PLP          +R++ R++DL  + 
Sbjct: 116 -----EGHVFKTHTGEVTIKVNKLTLLSKSLR-PLPEKWHGLKDTELRYRQRYVDLIVNP 169

Query: 138 LHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
             ++  VKR++I+  +R  M+ + F+E  TP++ A      AR F+          Y + 
Sbjct: 170 EVRDTFVKRSQIVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALDIDIY-MR 228

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G DR F++  CFR+E    +R   EF  ++   ++ + +D +   EN
Sbjct: 229 IAPELYLKRLIVGGMDRVFEMNRCFRNEGID-NRHNPEFTTIESYQAYGDVEDAIRLTEN 287

Query: 256 VLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           ++    +E      ++           + RI   + +++Y  +  D
Sbjct: 288 LVSYCAQEVLGTQEITYQGTEINLTPPWNRITMAEGVKKYTGEDFD 333



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 4/92 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++    G E+A+G    +      Q F +    +E  ++           A + G+P
Sbjct: 401 TERFEAFIYGRELANGFSELNDPIDQKQRFLDQLKEREAGDDEAHRMDEDFVTALEYGLP 460

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P  G+  GIDR+VM L  + ++R+V LFP+ +
Sbjct: 461 PTAGLGVGIDRLVMFLTDSASIRDVLLFPLMK 492


>gi|268609181|ref|ZP_06142908.1| lysyl-tRNA synthetase, class II [Ruminococcus flavefaciens FD-1]
          Length = 539

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 71/344 (20%), Positives = 132/344 (38%), Gaps = 23/344 (6%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
             DL   +    VR++G +   R  G   F+D+RD     QV    +    ++ K+ + +
Sbjct: 79  AADLEALNSN-IVRIAGRIMSWRDMGKANFIDVRDASDRIQVYVRSNDVGADLFKTFKKK 137

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
           W +   G ++             G+I + A+ I  L     LPLP           R++ 
Sbjct: 138 WDI---GDIVGIEGYVFRTK--RGEISIHAKGIT-LLSKSLLPLPEKWHGLKDTDTRYRQ 191

Query: 129 RFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R+LDL     +    VKR++II S+R  +  + F+E  TP+L +++   A          
Sbjct: 192 RYLDLIINPDVKDTFVKRSKIIASIRRYLDNQGFMEVETPMLVSNAGGAAARPFETHYNA 251

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
                 L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 252 LDEEVKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYY 310

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
            +++  EN+ R V +E     TV               YG    DL  P     + +   
Sbjct: 311 GMMDLTENMFRHVAQEVCGTTTVP--------------YGEHMIDLGKPFERLTMIDAVK 356

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
                 F++I ++                     D +N +  + 
Sbjct: 357 KYSGVDFNEIKTLEEARAAAKEHNVEFEDRHKRGDILNLFFEAY 400



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 59/160 (36%), Gaps = 30/160 (18%)

Query: 417 RNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           R+     L +     +  +  +  +IMD P               +P T  +        
Sbjct: 386 RHKRGDILNLFFEAYVEEHLIQPTFIMDHP------------VEISPLTKKKPDAPDY-- 431

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYR 527
                    +++L   G E+ +     +      + F     +    +           R
Sbjct: 432 -------VERFELFITGREMCNAYSELNDPIDQRERFKAQEEALSQGDEEANRTDEDFLR 484

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + GMPP GGI  GIDR+VMLL  + ++R+V LFP  ++
Sbjct: 485 ALEIGMPPTGGIGYGIDRLVMLLTNSPSIRDVLLFPTMKS 524


>gi|29653775|ref|NP_819467.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|154707035|ref|YP_001424981.1| lysyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|161830462|ref|YP_001596361.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|164686042|ref|ZP_01947471.2| lysyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165924116|ref|ZP_02219948.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|212213083|ref|YP_002304019.1| lysyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212218959|ref|YP_002305746.1| lysyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|39932163|sp|Q83E97|SYK_COXBU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189082957|sp|A9KEG1|SYK_COXBN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189082958|sp|A9NBP7|SYK_COXBR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710886|sp|B6J8K2|SYK_COXB1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710887|sp|B6J1P6|SYK_COXB2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|29541038|gb|AAO89981.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|154356321|gb|ABS77783.1| lysyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|161762329|gb|ABX77971.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|164601597|gb|EAX31910.2| lysyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165916439|gb|EDR35043.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|212011493|gb|ACJ18874.1| lysyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212013221|gb|ACJ20601.1| lysyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 498

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 66/299 (22%), Positives = 127/299 (42%), Gaps = 14/299 (4%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G L    +   V+++G +   R  G   F  I+D  G  Q+    DS    +    +S  
Sbjct: 54  GALTAKAI--RVKMAGRMMTRRIMGKASFAHIQDMKGRMQIYVTRDSLPQGVYSDFKSWD 111

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           +  I G+      E       T ++ +   +I +L+ A   P+P      + +  RF+ R
Sbjct: 112 LGDIVGI------EGELFKTKTEELSVKVDQIRLLTKALR-PMPDKFHGLHDQEQRFRQR 164

Query: 130 FLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +   +++   R+++I  +R  +    +IE  TP++        AR F       
Sbjct: 165 YLDLIVNESSRHLFQTRSQVIAQIRRFLDDRGYIEVETPMMHPLPGGAAARPFETHHNAM 224

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               + L  AP+ Y + L+  GF++ ++I   FR+E   +   P EF  L+   ++   +
Sbjct: 225 NMDLF-LRIAPELYLKRLVVGGFEKVYEINRNFRNEGISTRHNP-EFTMLEFYQAYATYE 282

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-NPIIMHNVTEH 305
           D++   E+++R + E+      +    +RI  +    R       L+ NP I  +  +H
Sbjct: 283 DMMMLTESMIRHLAEKIFGVMEIKYQGVRIDLNKPFPRLSLRDAILQFNPGITPDQIDH 341



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   EEK +         P+      + N+       +++    G EIA+G    +  
Sbjct: 369 LFEKLVEEK-LQQPIFITHFPKEVSPLSRANEENDFITDRFEFYVGGREIANGFSELNDP 427

Query: 502 EVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F     ++        +       A + G+PP  G   GIDR+VML     ++R
Sbjct: 428 EDQAARFREQLKARNAGDLEAMSFDEDYITALEYGLPPTAGEGIGIDRLVMLFTDNASIR 487

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 488 DVILFP 493


>gi|77918852|ref|YP_356667.1| lysyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|77544935|gb|ABA88497.1| lysyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 494

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 66/291 (22%), Positives = 131/291 (45%), Gaps = 20/291 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + ++     L+G +   R  G   F+ I+D +G  QV    D+   E  +  R   +  I
Sbjct: 51  LENINHHYALAGRMMARRDFGKAAFIQIQDRHGRLQVFVRRDNVGEEAFQMFRKLDIGDI 110

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+              T ++ L A  + +L+ + + PLP          +R++ R+LDL
Sbjct: 111 VGV------TGKPFRTKTNELSLRADSLRLLTKSLQ-PLPEKWHGLTDVEMRYRQRYLDL 163

Query: 134 RRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSF 191
             +  + +   KR++I++ +R  M+  +F+E  TP++   +    AR F+      +   
Sbjct: 164 IVNPDVQEIFKKRSQIVSLIRNFMVDNDFLEVETPMMQPVAGGATARPFMTHHNTLKMDL 223

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + L  AP+ Y + L+  GF+R F+I   FR+E       P EF  ++   ++   +D+++
Sbjct: 224 F-LRIAPELYLKRLVVGGFERVFEINRNFRNEGISIQHNP-EFTMMEFYQAYANYEDLMD 281

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDL 293
             E ++  V E+     T +           + R+   +AI +YG  +P++
Sbjct: 282 FTEKLICHVAEKVVGSLTFTYGGREVDLTAPWDRLTVKEAILKYGDVEPEV 332



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 55/154 (35%), Gaps = 27/154 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                 +  E  +     +   +I  +P               +P +        +    
Sbjct: 357 GKLLTELFDE--VAEPKLWNPTFITQYP------------TEVSPLSRKNEDNPEVVD-- 400

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
                  +++L   G E+A+     +        F+   + KE  ++          RA 
Sbjct: 401 -------RFELFVVGRELANAFSELNDPIDQKDRFAKQLLEKEAGDDEAHAMDEDYIRAL 453

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + G+PP  G   GIDR+VMLL  A ++REV LFP
Sbjct: 454 EYGLPPTAGEGIGIDRLVMLLTDAASIREVILFP 487


>gi|115352206|ref|YP_774045.1| lysyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|172061073|ref|YP_001808725.1| lysyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|122322758|sp|Q0BDR2|SYK_BURCM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238689175|sp|B1YT20|SYK_BURA4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|115282194|gb|ABI87711.1| lysyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|171993590|gb|ACB64509.1| lysyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 508

 Score =  210 bits (535), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 68/308 (22%), Positives = 121/308 (39%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL  +   S           V ++G +   R  G   F  ++D  G  Q    P+
Sbjct: 43  THHAADLQATFADSDKAALEANPVEVSVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPN 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +  +++ +LS A   PLP  
Sbjct: 103 DVGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVQCKELRLLSKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + +R++ R++DL            RTR I S+R  M   +F+E  TP+L     
Sbjct: 156 FHGLADQEMRYRQRYVDLIVTPETRDTFRARTRTIASIRKFMDNADFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T+            F R+    AI+
Sbjct: 274 FTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFHRLTITQAIQ 333

Query: 285 RYGTDKPD 292
           +Y     D
Sbjct: 334 KYAPQYTD 341



 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +  +     P       + +D       +++L   G EIA+G    +  
Sbjct: 378 LFEETAESQLWEPTY-IIDYPVEVSPLARASDTTPGITERFELFMTGREIANGFSELNDP 436

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      K+  +           RA + GMPP GG   GIDR+VMLL  +  +R
Sbjct: 437 EDQAARFKKQVEQKDAGDEEAMFFDADYIRALEHGMPPTGGCGIGIDRLVMLLTDSPTIR 496

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 497 DVLLFP 502


>gi|16081991|ref|NP_394405.1| aspartyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|13878780|sp|Q9HJM1|SYD_THEAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|10640261|emb|CAC12075.1| aspartyl-tRNA synthetase related protein [Thermoplasma acidophilum]
          Length = 428

 Score =  210 bits (535), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 92/308 (29%), Positives = 140/308 (45%), Gaps = 23/308 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L   + G+ V + GW+   R    I FL IRD+ G  Q     D A  +I K 
Sbjct: 3   RT-YIDTLRDHEDGAKVVVYGWMQEARIMKNISFLMIRDNTGTIQATFKNDEATLDIIKR 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES 123
           +  E ++ +DG V  +S       I    IE+S   I I++ AE  LPLPV    +    
Sbjct: 62  INRESIVRVDGSVNKKS-------ISKAGIEISGTSISIVNEAEAPLPLPVVDPVQADLE 114

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R   RF+DLR+  +       + ++  +R  + ++ FIE  TP + A++ EG  D    
Sbjct: 115 TRLNSRFMDLRKRNISAIFRIESALLWGIRQYLHSQKFIEVHTPKIVAAATEGGSDLFPV 174

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++  L Q+PQ YK++LM++GFDR F++ P FR E+  + R   EF  +D+EMSF
Sbjct: 175 RYFEKDAY--LNQSPQLYKEVLMSAGFDRVFEVGPAFRAEEHNTTRHLNEFTSIDIEMSF 232

Query: 244 VEQDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAIRRYGTDKP 291
            + +D +  +EN +R   E     N                 F RI Y+  I     D  
Sbjct: 233 ADHNDAMAMLENAIRSGIENAVRENAEDFESLGISISVPETPFPRITYEQCIDLLQKDGI 292

Query: 292 DLRNPIIM 299
           D       
Sbjct: 293 DFTFGDDF 300



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 26/136 (19%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           F +I ++P             +  PF TMP+     L  +         +DL     E+ 
Sbjct: 315 FYFITEWP------------SSVRPFYTMPKSEDPRLTNS---------FDLQYREIEVT 353

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  ++++Q F+   +  +     F     AF+ GMPPH G   G++R+ M+LLG
Sbjct: 354 SGAQRVHDPKMLIQRFNEKKLDVKS----FQFYVDAFKYGMPPHAGWGLGLERLTMILLG 409

Query: 553 AKNVREVSLFPMSQNF 568
             N+RE +LFP  +  
Sbjct: 410 LNNIRETTLFPRDRTR 425


>gi|319648606|ref|ZP_08002820.1| lysyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|317389373|gb|EFV70186.1| lysyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 500

 Score =  210 bits (535), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 129/354 (36%), Gaps = 32/354 (9%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   DL           + +    V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 40  RTHQSTDLIESYNEFSKEELEEKAIEVTIAGRMMTKRGKGKAGFAHIQDLKGQIQIYVRK 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   E  +  +S  +  I G+        +      G++ + A   ++L+ A   PLP 
Sbjct: 100 DSVGEEQYEWFKSSDLGDIVGV------TGVMFKTNVGELSVKATSFDLLTKALR-PLPD 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +   KN  + R++II SMR  +    ++E  TP + A  
Sbjct: 153 KYHGLKDIEQRYRQRYLDLIVNPESKNTFITRSKIIQSMRRYLDDHGYLEVETPTMHAIP 212

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 213 GGASARPFITHHNALDMPLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP- 270

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  DI+   EN++  + +E                      Y  D   
Sbjct: 271 EFTMIELYEAYADYKDIMRLTENLIAHIAQEVLG-----------TTTVQYGDYEVDLKP 319

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
               + M +  +     +F     +       +   I    G       +   E
Sbjct: 320 EWKRLHMVDAVKEATGVDFWKEVSVEEARAYAKEHGIEISEGMSVGHIINEFFE 373



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  I      +  P       K N        +++L   G E A+     +  
Sbjct: 371 FFEQKVEETLIQPT-FIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDP 429

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +           A + GMPP GG+  GIDR++MLL  + ++R
Sbjct: 430 IDQKERFEAQLKEREEGNDEAHMMDEDFVEALEYGMPPTGGLGIGIDRLIMLLTNSPSIR 489

Query: 558 EVSLFPMSQNF 568
           +V LFP  ++ 
Sbjct: 490 DVLLFPQMRHR 500


>gi|258592406|emb|CBE68715.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [NC10 bacterium
           'Dutch sediment']
          Length = 500

 Score =  210 bits (535), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 11/273 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            +D    V ++G +  +R HG + F  ++D  G  Q+  + D    ++    +   V   
Sbjct: 49  ETDAAPEVAIAGRLMSLRHHGKVTFAHLQDGSGRMQIYLSRDVLGAQLYDLCKRLDVGDH 108

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      E       TG++ +    + +LS +   PLP           RF+ R+LDL
Sbjct: 109 LGV------EGQLFRTRTGELTVRVGTVRLLSKSLR-PLPEKWHGLTDVETRFRQRYLDL 161

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSF 191
             +    +  + R+R+I  +R    +  F+E  TP++ + +    AR F+          
Sbjct: 162 IVNRQVADAFRKRSRLIAEIRRFFESREFLEVETPMMQSMAGGAMARPFVTHHNALDIKL 221

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   +   P EF  L+   ++ + +D++ 
Sbjct: 222 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGISTQHNP-EFTMLEFYQAYADYEDLMA 279

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
             E +L  + +  +    V+    +I +     
Sbjct: 280 MTEEMLAHLAKGITGDQQVTYQGQQISFAPPWP 312



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 25/148 (16%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           ++     +  +I+DFP  E +   K       P T                    +++L 
Sbjct: 365 LVESKLIQPTFIIDFPT-ELSPLAKATQ--GEPTT------------------VQRFELF 403

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAA 541
             G EIA+     +        F +    ++  +    GL     RA + GMPP  G   
Sbjct: 404 IGGMEIANAYSELNDPREQRIRFLDQLRQRDQGDLEAHGLDEDFLRALEYGMPPTAGEGI 463

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           GIDR+ MLL  + ++R+V LFP+ +   
Sbjct: 464 GIDRLAMLLTDSPSIRDVILFPLLKPAQ 491


>gi|251790992|ref|YP_003005713.1| lysyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247539613|gb|ACT08234.1| lysyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 505

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 71/347 (20%), Positives = 131/347 (37%), Gaps = 33/347 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +G  V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L  
Sbjct: 61  LEALGLEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              D        R++I+  +R  M+  +F+E  TP++        AR F+          
Sbjct: 175 IANDESRHTFRVRSQILAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS-- 309
             E++ R + +       V               YG    D   P     + E       
Sbjct: 293 LTESLFRTLAQNVLGTTEVP--------------YGDQVFDFGKPFEKLTMREAIKKYRP 338

Query: 310 -----EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
                +   F    ++     +     K  G  R   +   E A + 
Sbjct: 339 ETNLADLDSFDAAKAIAESIGIK--VEKSWGLGRIVTEIFEEVAEAH 383



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 70/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   ++ D DS      D  K  + +   +   +  LG I    FE
Sbjct: 323 PFEKLTMREAIKKYRPETNLADLDSF-----DAAKAIAESIGIKVEKSWGLGRIVTEIFE 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND       +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDQNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F +   +K+  ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|271499214|ref|YP_003332239.1| lysyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270342769|gb|ACZ75534.1| lysyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 505

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 71/347 (20%), Positives = 131/347 (37%), Gaps = 33/347 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +G  V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L  
Sbjct: 61  LEALGLEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              D        R++I+  +R  M+  +F+E  TP++        AR F+          
Sbjct: 175 IANDESRHTFRVRSQILAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS-- 309
             E++ R + +       V               YG    D   P     + E       
Sbjct: 293 LTESLFRTLAQNVLGTTEVP--------------YGDQVFDFGKPFEKLTMREAIKKYRP 338

Query: 310 -----EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
                +   F    ++     +     K  G  R   +   E A + 
Sbjct: 339 ETNLADLDSFDAAKAIAESIGIK--VEKSWGLGRIVTEIFEEVAEAH 383



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 70/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   ++ D DS      D  K  + +   +   +  LG I    FE
Sbjct: 323 PFEKLTMREAIKKYRPETNLADLDSF-----DAAKAIAESIGIKVEKSWGLGRIVTEIFE 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND       +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDQNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F +   +K+  ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|253687050|ref|YP_003016240.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511528|sp|C6D8Z6|SYK_PECCP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|251753628|gb|ACT11704.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 505

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 64/276 (23%), Positives = 120/276 (43%), Gaps = 19/276 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L   G ++   
Sbjct: 69  TVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL---GDILGAR 125

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHK 140
            +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL   D    
Sbjct: 126 GKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESRN 182

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
               R++++ ++R  M+   F+E  TP++        AR F+          Y L  AP+
Sbjct: 183 TFRIRSKVMAAIRSFMVDHGFMEVETPMMQVIPGGASARPFITHHNALDIDMY-LRIAPE 241

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   EN+ R 
Sbjct: 242 LYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTENLFRT 300

Query: 260 VFEEFSNGNTVSN---------NFLRICYDDAIRRY 286
           + ++     TV            F ++   +AI +Y
Sbjct: 301 LTQDVLGSTTVEYGDQTFDFGKPFEKLTMREAICKY 336



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 8/151 (5%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLS 476
             IAQ LGI     +    I+    +E   E   I       T     +  L + ND   
Sbjct: 352 TAIAQSLGIKIEKSWGLGRIV-TEIFEETAESSLIQPTF--ITEYPAEVSPLARRNDQNP 408

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCG 532
               +++    G EI +G    + +E   + F+    +K+  ++           A + G
Sbjct: 409 EITDRFEFFIGGREIGNGFSELNDAEDQAERFAQQVNAKDAGDDEAMFYDEDYVTALEHG 468

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +PP  G+  GIDR+VML   +  +R+V LFP
Sbjct: 469 LPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499


>gi|313894590|ref|ZP_07828153.1| lysine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313440780|gb|EFR59209.1| lysine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 507

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 68/286 (23%), Positives = 128/286 (44%), Gaps = 20/286 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +  +R HG   F ++RD  G  QV    D    +  K V+   +  I G+ 
Sbjct: 57  GQPVVIAGRLMTIRSHGKTAFANVRDKSGDIQVYFRKDVLGEDAYKYVKMLDIGDIIGV- 115

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                E       TG++ +   K+ +LS +   PLP          +R++ R++DL  + 
Sbjct: 116 -----EGHVFKTHTGEVTIKVNKLTLLSKSLR-PLPEKWHGLKDTELRYRQRYVDLIVNP 169

Query: 138 LHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
             ++  VKR++I+  +R  M+ + F+E  TP++ A      AR F+          Y + 
Sbjct: 170 EVRDTFVKRSQIVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALDIDIY-MR 228

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G DR F++  CFR+E    +R   EF  ++   ++ + +D +   EN
Sbjct: 229 IAPELYLKRLIVGGMDRVFEMNRCFRNEGID-NRHNPEFTTIESYQAYGDVEDAIRLTEN 287

Query: 256 VLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           ++    +E      ++           + RI   + +++Y  +  D
Sbjct: 288 LVSYCAQEVLGTQEITYQGTEINLTPPWNRITMAEGVKKYTGEDFD 333



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 4/92 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++    G E+A+G    +      Q F +    +E  ++           A + G+P
Sbjct: 401 TERFEAFIYGRELANGFSELNDPIDQKQRFLDQLKEREAGDDEAHRMDEDFVTALEYGLP 460

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P  G+  GIDR+VM L  + ++R+V LFP+ +
Sbjct: 461 PTAGLGVGIDRLVMFLTDSASIRDVLLFPLMK 492


>gi|152979179|ref|YP_001344808.1| lysyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|229559853|sp|A6VPH6|SYK_ACTSZ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|150840902|gb|ABR74873.1| lysyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 503

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 21/286 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI-AKSVRSEWVLC 72
           + +    V ++G +   R  G   F+ I+D  G  Q+    D+    + A+ V+S  +  
Sbjct: 57  LKEKNPQVAVAGRIMTRRAMGKATFITIQDMSGKIQLYVACDNLPEGVYAEDVKSWDLGD 116

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G+      +       T ++ + A ++++L+ A   PLP        +  R++ R+LD
Sbjct: 117 IVGI------KGTLFKTKTNELTVKAHEVQLLTKALR-PLPDKFHGLSDQETRYRQRYLD 169

Query: 133 LRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +    +  V R+++I  +R   I + FIE  TP+L        AR F+         
Sbjct: 170 LISNEESRRTFVIRSKVIAGIREYFIGKGFIEVETPMLQVIPGGAAARPFVTHHNALDID 229

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +  D++
Sbjct: 230 MY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMIEYYQAYADYHDLM 287

Query: 251 NTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYG 287
           +  E +LR +  +      V            F RI   DA+ +YG
Sbjct: 288 DNTEELLRKLALDILGTTIVPYGEYEFDFGKPFERITMHDAVLKYG 333



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 68/180 (37%), Gaps = 10/180 (5%)

Query: 395 DGDSCFFIAGDPLKFCSFAADA-RNHIAQ-ELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
             D+      +         D  R   A  +LGI     +    +++   +E   E   I
Sbjct: 325 MHDAVLKYGAEKGIVKEDLYDLERAKAAATKLGIEIQKSWGLGSVVNA-IFEEVAEHHLI 383

Query: 453 DFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                  T     +  L + ND       +++L   G EI +G    + +E   + F   
Sbjct: 384 QPTFL--TAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAERFDAQ 441

Query: 512 GISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +K+  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  ++
Sbjct: 442 VAAKDAGDDEAMFKDDDFVTALEHGLPPTAGEGLGIDRLAMLFANAPSIRDVILFPAMKH 501


>gi|284929667|ref|YP_003422189.1| lysyl-tRNA synthetase (class II) [cyanobacterium UCYN-A]
 gi|284810111|gb|ADB95808.1| lysyl-tRNA synthetase (class II) [cyanobacterium UCYN-A]
          Length = 514

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 64/354 (18%), Positives = 132/354 (37%), Gaps = 31/354 (8%)

Query: 6   THSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--- 54
           TH+   L           ++   V L+G +   R  G + F  ++D  G  Q+  +    
Sbjct: 45  THNAAHLQKTYVDLGEGEELDKEVSLAGRIMARRVFGKLAFFTLQDETGNIQLYLDKKII 104

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                 I         L   G ++  +          G++ +  +  EIL+ +  LPLP 
Sbjct: 105 QDNMSNIENPFNHLKKLIDTGDIIGVTGSIKKTE--KGELSIKVKTYEILTKSL-LPLPD 161

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASS 173
                     R++ R++DL  +   +   + R+++I+S+R  +    F+E  TP+L + +
Sbjct: 162 KWHGLTDREKRYRQRYIDLIVNPSTRETFRCRSKVISSIRKFLEERGFLEIETPVLQSEA 221

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  GF++ F+I   FR+E   +   P 
Sbjct: 222 GGADARPFITHHNTLNMDLY-LRIATELHLKRLIVGGFEKVFEIGRIFRNEGISTKHNP- 279

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +   ++   E ++  +  +      +     +I +    R+       
Sbjct: 280 EFTSIEIYEAYSDYYGMMELTEKIITRIIHDIGQDTIIECQGQKINFSQPWRK------- 332

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
               I M+ + +   + +F  F              I        R     +NE
Sbjct: 333 ----ITMNEIVKEKNNLDFESFKTFEEAKIAVNKLGIQIPEAC--RTIGKLLNE 380



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 68/216 (31%), Gaps = 40/216 (18%)

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +    ++E                   +    +L +Q             + C       
Sbjct: 330 WRKITMNEIVKEKNNLDFESFKTFEEAKIAVNKLGIQI-----------PEACRTIGKLL 378

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           N + ++   +     +  +I+DFP      E   +   H                     
Sbjct: 379 NEVFEQ--TVEETIIQPTFILDFPV-----EISPLAKPHR----------------TKGN 415

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
              +++L   G E+A+            +      I K        N       A + GM
Sbjct: 416 VVERFELYIMGRELANSFSELTDPIDQRERLEKQAIKKAAGDLEAHNIDEDFLTALEYGM 475

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP--MSQN 567
           PP GG+  GIDR++MLL  + ++R+V  FP   +QN
Sbjct: 476 PPTGGLGIGIDRLIMLLTNSASIRDVIAFPLLKNQN 511


>gi|170702007|ref|ZP_02892927.1| lysyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170133097|gb|EDT01505.1| lysyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 508

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 67/308 (21%), Positives = 120/308 (38%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL  +   S           V ++G +   R  G   F  ++D  G  Q    P+
Sbjct: 43  THHAADLQATFADSDKATLEANPVEVSVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPN 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +  +++ +LS A   PLP  
Sbjct: 103 DVGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVQCKELRLLSKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + +R++ R++DL            RTR I S+R  M   +F+E  TP+L     
Sbjct: 156 FHGLADQEMRYRQRYVDLIVTPETRDTFRARTRTIASIRKFMDNADFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +      +            F R+    AI+
Sbjct: 274 FTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAAIQYQGRELDLAKPFHRLTITQAIQ 333

Query: 285 RYGTDKPD 292
           +Y     D
Sbjct: 334 KYAPQYTD 341



 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +  +     P       + +D       +++L   G EIA+G    +  
Sbjct: 378 LFEETAESQLWEPTY-IIDYPVEVSPLARASDTTPGITERFELFMTGREIANGFSELNDP 436

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      K+  +           RA + GMPP GG   GIDR+VMLL  +  +R
Sbjct: 437 EDQAARFKKQVEQKDAGDEEAMFFDADYIRALEHGMPPTGGCGIGIDRLVMLLTDSPTIR 496

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 497 DVLLFP 502


>gi|238917592|ref|YP_002931109.1| lysyl-tRNA synthetase, class II [Eubacterium eligens ATCC 27750]
 gi|238872952|gb|ACR72662.1| lysyl-tRNA synthetase, class II [Eubacterium eligens ATCC 27750]
          Length = 534

 Score =  210 bits (534), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 62/296 (20%), Positives = 124/296 (41%), Gaps = 19/296 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V  +G +   R  G   F +I D  G  Q   + D+   E     +   +  I G+    
Sbjct: 98  VSFAGRMMFKRVMGKASFCNIADLKGRMQAYISRDAIGEEAYADFKKSDIGDIFGI---- 153

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       TG+I + A++I +LS + +  LP          +R++ R++DL  +   K
Sbjct: 154 --KGFIFRTKTGEISVHAEEITLLSKSLQ-VLPEKFHGITDTDMRYRQRYVDLIMNPEVK 210

Query: 141 -NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
              VKR++II  +R  +   +F+E  TP L +++   A                L  + +
Sbjct: 211 ETFVKRSKIIKEIRKFLDGRDFMEVETPTLVSNAGGAAARPFETHYNALDEDVKLRISLE 270

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G +R ++I   +R+E   +   P EF  +++  ++ + + ++   E++ R 
Sbjct: 271 LYLKRLIVGGLERVYEIGRVYRNEGVDTRHNP-EFTLMELYQAYTDYEGMMELTESMFRH 329

Query: 260 VFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKPDLRNPIIMHNVTEH 305
           + E       ++ N         F R+  +DAI+ Y G D   ++       + + 
Sbjct: 330 LAETVCGTTKITYNGTEIDLGKPFRRLTMNDAIKEYAGVDFDTIKTDEEAKALAKE 385



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 13/134 (9%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG----GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           F+E   EE  I      F M        +   K +D   +   +++L  N +E+ +    
Sbjct: 403 FFEEYCEENLIQPT---FIMDHPLAISPLTKKKPSDPEKV--ERFELFINTWEMCNAYSE 457

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
            +      + F+    + E  +            A   GMPP GGI  GIDR+VMLL  +
Sbjct: 458 LNDPIDQRERFAQQDKNAENGDEEAQHTDEDFLNALAVGMPPTGGIGYGIDRLVMLLTDS 517

Query: 554 KNVREVSLFPMSQN 567
             +R+V LFP  ++
Sbjct: 518 PAIRDVLLFPTMKS 531


>gi|227112637|ref|ZP_03826293.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 505

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 64/276 (23%), Positives = 120/276 (43%), Gaps = 19/276 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +   R  G   F+ ++D  G  Q+  + D     I      +W L   G ++   
Sbjct: 69  TVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDL---GDILGAR 125

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHK 140
            +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL   D    
Sbjct: 126 GKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDESRN 182

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
               R++++ ++R  M+   F+E  TP++        AR F+          Y L  AP+
Sbjct: 183 TFRIRSKVMAAIRSFMVDHGFMEVETPMMQVIPGGASARPFITHHNALDIDMY-LRIAPE 241

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   EN+ R 
Sbjct: 242 LYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTENLFRT 300

Query: 260 VFEEFSNGNTVSN---------NFLRICYDDAIRRY 286
           + ++     TV            F ++   +AI +Y
Sbjct: 301 LTQDVLGSTTVQYGDQTFDFGKPFEKLTMREAICKY 336



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 8/154 (5%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLS 476
             IAQ LGI     +    I+    +E   E   I       T     +  L + ND   
Sbjct: 352 TAIAQSLGIKIEKSWGLGRIV-TEIFEETAESSLIQPTF--ITEYPAEVSPLARRNDQNP 408

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCG 532
               +++    G EI +G    + +E   + F+    +K+  ++           A + G
Sbjct: 409 EITDRFEFFIGGREIGNGFSELNDAEDQAERFAQQVNAKDAGDDEAMFYDEDYVTALEHG 468

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +PP  G+  GIDR+VML   +  +R+V LFP  +
Sbjct: 469 LPPTAGLGIGIDRMVMLFTNSHTIRDVILFPTMR 502


>gi|330896124|gb|EGH28345.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 194

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 89/192 (46%), Positives = 124/192 (64%), Gaps = 1/192 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           R+H CG L  S  G  + L GWVHR R HGG+IFLDIRD  G+ QVV +PD    F  A 
Sbjct: 3   RSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAAAD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            VRSE+V+ + G V +R A  +NAN+ +G IE+   ++E+L+ +E  P P+    +  E 
Sbjct: 63  RVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVGEE 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R +YRF+DLRR  + + +  R+RI  S+R  +    F++  TPILT ++PEGARD+LVP
Sbjct: 123 TRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLVP 182

Query: 184 SRVNQGSFYALP 195
           SR + GSF+ALP
Sbjct: 183 SRTHPGSFFALP 194


>gi|283835351|ref|ZP_06355092.1| lysine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291068516|gb|EFE06625.1| lysine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 505

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 75/364 (20%), Positives = 134/364 (36%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHADFDAKENEELEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I+  +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQIMAGIRQFMVGRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +       V               YG +  D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQNVLGTTEVP--------------YGEEVFD 319

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEW 347
              P     + E             L      +  A        K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIQKYRPETNMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 71/197 (36%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   +M D D+      D  K  + +   +   +  LG I    FE
Sbjct: 323 PFEKLTMREAIQKYRPETNMADLDNF-----DSAKAIAESIGIKVEKSWGLGRIVTEIFE 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F +   +K+  ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFQDQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|213965141|ref|ZP_03393339.1| lysyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213952255|gb|EEB63639.1| lysyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 510

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 114/578 (19%), Positives = 186/578 (32%), Gaps = 134/578 (23%)

Query: 5   RTHSCGDLGVS----DVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  D+       + G      V + G V  +R  G + F  +++  G T       +
Sbjct: 42  RTHSLKDVREEWGHLEAGEETQDVVTVIGRVMFIRNTGKLCFAALQEGDGTTLQAMLSKA 101

Query: 57  ACFEIA-----KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              E A       V     + I G V+S            G++ + A + ++ S A    
Sbjct: 102 EVGEDALAAWKADVDMGDFVLITGRVISSRR---------GELSVMATEWQMASKALRPL 152

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILT 170
              F   +  E  R ++R+ DL      + N + R ++I  +R  +    F+E  TP+L 
Sbjct: 153 PVSFA--DLSEDSRVRHRYTDLIMREQARTNALTRIKVIRELRHALERRGFLEVETPMLQ 210

Query: 171 A-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  AR F+  S       Y L  AP+ Y +  +  G +R F+I   FR+E   S  
Sbjct: 211 TLHGGAAARPFVTHSNALDIDLY-LRIAPELYLKRCVVGGMERVFEINRNFRNEGIDSSH 269

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  L+   +F   DD   T+  V++ +        T                    
Sbjct: 270 SP-EFAMLEYYEAFGTYDDSARTVREVIQEICVAVFGSTT-------------------- 308

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
                  + + + TE     E++      S+N      A+  K  G      D       
Sbjct: 309 -------VTLADGTEFDFGGEWKQIEMYPSLNE-----ALARKFPGQPEVTIDS------ 350

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
                                          +   +AI   + ++           P K 
Sbjct: 351 ------------------------------TVEELKAIADVIGLEV----------PEKG 370

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
                     I + L     +     ++ DFP               +P T         
Sbjct: 371 GWGHGKLVEEIWELLCEDQLDG--PVFVRDFP------------VETSPLTRQHRS---- 412

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
                      ++DL   GFE+A+G        V  + F +        ++         
Sbjct: 413 -----KPGVTEKWDLYVRGFELATGYSELVDPVVQRERFEDQARLAAGGDDEAMVLDEDF 467

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A + GMPP  G+  GIDR++M L G   +RE  LFP
Sbjct: 468 LHAMEQGMPPTTGVGMGIDRLLMALTGLG-IRETVLFP 504


>gi|16761821|ref|NP_457438.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|29143308|ref|NP_806650.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|213616408|ref|ZP_03372234.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
 gi|213646960|ref|ZP_03377013.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
 gi|33301733|sp|Q8Z3X8|SYK1_SALTI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|25293040|pir||AF0871 lysyl tRNA synthetase (LysRS) [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16504123|emb|CAD02870.1| lysyl tRNA synthetase (LysRS) [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138942|gb|AAO70510.1| lysyl tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
          Length = 505

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 75/345 (21%), Positives = 139/345 (40%), Gaps = 29/345 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L  
Sbjct: 61  LEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDL 174

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  K R++I+  +R  M+A  F+E  TP++        AR F+          
Sbjct: 175 ISNDESRNTFKTRSKILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---MHN-VTEHFV 307
             E++ R + ++      V               YG +  D   P     MH  + ++  
Sbjct: 293 LTESLFRTLAQDVLGTTQVP--------------YGDEVFDFGKPFEKLTMHEAIKKYRP 338

Query: 308 HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQ 351
            ++        S     E   I   K  G  R   +  +E A + 
Sbjct: 339 ETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFDEVAEAH 383



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 69/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMHEAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F +   +K   ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFLDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|238783658|ref|ZP_04627678.1| Lysyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238715371|gb|EEQ07363.1| Lysyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 505

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 75/355 (21%), Positives = 139/355 (39%), Gaps = 31/355 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y +    +L   ++   V ++G +   R  G   F+ ++D  G  Q+  + D     +  
Sbjct: 53  YGSKENEELEALNI--EVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYN 110

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++    +       TG++ +   ++ +L+ A   PLP        + 
Sbjct: 111 EEFKKWDL---GDILGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQE 164

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL  +   +N  K R+++++ +R  M+ + F+E  TP++        AR F+
Sbjct: 165 TRYRQRYLDLIANDESRNTFKVRSQVMSGIRSFMVEKGFMEVETPMMQVIPGGASARPFV 224

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M
Sbjct: 225 THHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYM 282

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E + R + E                   ++ +YG    D   P +   
Sbjct: 283 AYADYKDLIVLTEELFRTLTENILG--------------SSVVQYGEQTFDFGKPFVKLT 328

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEWARSQ 351
           + E             L         A        K  G  R  C+   E A S 
Sbjct: 329 MKEAICKYRPETNVADLDDMGKAVTIAESLGIKVEKSWGLGRVQCEIFEETAESH 383



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 66/198 (33%), Gaps = 17/198 (8%)

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
                  K    +  +    +   +   +     G  +         +   +  LG + C
Sbjct: 315 EQTFDFGKPFVKLTMKEAICKYRPETNVADLDDMGKAVTIAESLG-IKVEKSWGLGRVQC 373

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
             FE               E  +         P       + ND       +++    G 
Sbjct: 374 EIFE------------ETAESHLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGR 421

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDR 545
           EI +G    + +E   Q F++   +KE  ++           A + G+PP  G+  GIDR
Sbjct: 422 EIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDR 481

Query: 546 IVMLLLGAKNVREVSLFP 563
           +VML   +  +R+V LFP
Sbjct: 482 MVMLFTNSHTIRDVILFP 499


>gi|319897323|ref|YP_004135519.1| lysyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432828|emb|CBY81193.1| lysyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 502

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 20/299 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G++ + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    +       W
Sbjct: 54  GEI-LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNW 112

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L   G ++            T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 113 DL---GDIIGVKGTLF--KTKTNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +    +  + R++++  +R   I++ F+E  TP+L        AR F+      
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNAL 226

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  
Sbjct: 227 DVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYH 284

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           D+++  E +LR +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 285 DLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDL 343



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 12/180 (6%)

Query: 396 GDSCFFIAGDPLKFCSFAADA-RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            D+      D         D  R    A+ LGI     +    I++   +E   E   I 
Sbjct: 326 HDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQ 384

Query: 454 FAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                F M      S     ND       +++L   G EI +G    + +E   + F   
Sbjct: 385 PT---FLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQ 441

Query: 512 GISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 442 VTAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|301169952|emb|CBW29556.1| lysine tRNA synthetase, inducible [Haemophilus influenzae 10810]
          Length = 502

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 20/299 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G++ + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    +       W
Sbjct: 54  GEI-LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNW 112

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L   G ++            T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 113 DL---GDIIGVKGTLF--KTKTNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +    +  + R++++  +R   I++ F+E  TP+L        AR F+      
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNAL 226

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  
Sbjct: 227 DVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYH 284

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           D+++  E +LR +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 285 DLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDL 343



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 12/180 (6%)

Query: 396 GDSCFFIAGDPLKFCSFAADA-RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            D+      D         D  R    A+ LGI     +    I++   +E   E   I 
Sbjct: 326 HDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQ 384

Query: 454 FAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                F M      S     ND       +++L   G EI +G    + +E   + F   
Sbjct: 385 PT---FLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQ 441

Query: 512 GISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 442 VTAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|309751146|gb|ADO81130.1| Lysyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 502

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 20/299 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G++ + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    +       W
Sbjct: 54  GEI-LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNW 112

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L   G ++            T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 113 DL---GDIIGVKGTLF--KTKTNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +    +  + R++++  +R   I++ F+E  TP+L        AR F+      
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNAL 226

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  
Sbjct: 227 DVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYH 284

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           D+++  E +LR +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 285 DLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDL 343



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 12/180 (6%)

Query: 396 GDSCFFIAGDPLKFCSFAADA-RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            D+      D         D  R    A+ LGI     +    I++   +E   E   I 
Sbjct: 326 HDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQ 384

Query: 454 FAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                F M      S     ND       +++L   G EI +G    + +E   + F   
Sbjct: 385 PT---FLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQ 441

Query: 512 GISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 442 VAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|148826181|ref|YP_001290934.1| lysyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229559858|sp|A5UCQ0|SYK_HAEIE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|148716341|gb|ABQ98551.1| lysyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 502

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 20/299 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G++ + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    +       W
Sbjct: 54  GEI-LKEKGVEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNW 112

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L   G ++            T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 113 DL---GDIIGVKGTLF--KTKTNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +    +  + R++++  +R   I++ F+E  TP+L        AR F+      
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNAL 226

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  
Sbjct: 227 DVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYH 284

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           D+++  E +LR +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 285 DLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATVKYGADKGIVKEDL 343



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 10/153 (6%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+ LGI     +    I++   +E   E   I      F M      S     ND     
Sbjct: 353 AERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQPT---FLMAHPAEISPLARRNDENPEV 408

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMP 534
             +++L   G EI +G    + +E   + F     +KE  ++           A + G+P
Sbjct: 409 TDRFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           P  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|154484001|ref|ZP_02026449.1| hypothetical protein EUBVEN_01709 [Eubacterium ventriosum ATCC
           27560]
 gi|149735043|gb|EDM50929.1| hypothetical protein EUBVEN_01709 [Eubacterium ventriosum ATCC
           27560]
          Length = 513

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 66/328 (20%), Positives = 134/328 (40%), Gaps = 22/328 (6%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVL 71
            D    V ++G +   R  G   F +++D  G  QV    +      FE  K  +   + 
Sbjct: 68  KDPAKLVSIAGRIMLKRVMGKASFCNVQDKTGNIQVYVARNELGDEPFEEYKDFKKMDIG 127

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G+      +       TG+  + A ++ +LS + ++ LP          +R++ R+L
Sbjct: 128 DIVGV------KGYPFVTKTGEKSIHATEVTLLSKSLQI-LPEKHHGLTNTDLRYRQRYL 180

Query: 132 DLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL  +   K   +KR++II+ +R  +  + F+E  TP+L  ++   A             
Sbjct: 181 DLIMNPEVKETFIKRSKIISEIRKYLDGQGFMEVETPMLVHNAGGAAARPFETHFNALDE 240

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  + + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ +   ++
Sbjct: 241 DVKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNP-EFTLMELYQAYTDYHGMM 299

Query: 251 NTMENVLRGVFEEFSN---------GNTVSNNFLRICYDDAIRRY-GTDKPDLRNPIIMH 300
           +  EN+ R + E+               +S  F R+   DA+++Y G D  ++       
Sbjct: 300 DLTENLYRHLAEKVCGSAKIEYNGIEMDLSKPFERLTMVDAVKKYAGVDWNEVETVEQAR 359

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            + +           K   +N  +E + 
Sbjct: 360 ELAKEHHVEFEEHHKKGDILNLFFEEFV 387



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  +      F M     +  L      + +   +++   NG+E+A+     +
Sbjct: 382 FFEEFVEEHLVQPT---FIMDHPIEISPLTKKKPENPEYVERFEFFMNGWEMANAYSELN 438

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F        + +            A + GMPP GGI  GIDR+ MLL  A  
Sbjct: 439 DPIDQRERFKAQEELLALGDEEANTTDEDFMNALEIGMPPTGGIGFGIDRMCMLLTNAAA 498

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  + 
Sbjct: 499 IRDVLLFPTMKQ 510


>gi|78066893|ref|YP_369662.1| lysyl-tRNA synthetase [Burkholderia sp. 383]
 gi|77967638|gb|ABB09018.1| Lysyl-tRNA synthetase, class-2 [Burkholderia sp. 383]
          Length = 524

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 67/306 (21%), Positives = 120/306 (39%), Gaps = 30/306 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL  +   S           V ++G +   R  G   F  ++D  G  Q    P+
Sbjct: 59  THHAADLQTTFADSDKAALEANPVEVSVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPN 118

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +  +++ +LS A   PLP  
Sbjct: 119 DVGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVQCKELRLLSKALR-PLPDK 171

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + +R++ R++DL            RT+ I S+R  M    F+E  TP+L     
Sbjct: 172 FHGLSDQEMRYRQRYVDLIVTPETRDTFRARTKTIASIRKFMDNAEFMEVETPMLHPIPG 231

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 232 GAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 289

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T+            F R+    AI+
Sbjct: 290 FTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFHRLTITQAIQ 349

Query: 285 RYGTDK 290
           +Y  D 
Sbjct: 350 KYAPDY 355



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 60/163 (36%), Gaps = 27/163 (16%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
            P    +     +  + +E        +E  +I+D+P                       
Sbjct: 379 QPAFLNAGIGALQLALFEE--TAEAQLWEPTFIIDYP---------------------VE 415

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                + +D +     +++L   G EIA+G    +  E     F      K+  +     
Sbjct: 416 VSPLARASDTVPGITERFELFMTGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMF 475

Query: 525 ----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 RA + GMPP GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 476 FDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVLLFP 518


>gi|145633058|ref|ZP_01788790.1| lysyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144986284|gb|EDJ92863.1| lysyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 502

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 20/299 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G++ + + G  V+++G +   R  G   F+ I+D  G  Q+    D+    +       W
Sbjct: 54  GEI-LKEKGIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNW 112

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L   G ++            T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 113 DL---GDIIGVKGTLF--KTKTNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +    +  + R++++  +R   I++ F+E  TP+L        AR F+      
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNAL 226

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  
Sbjct: 227 DVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYH 284

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           D+++  E +LR +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 285 DLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATVKYGADKGIVKEDL 343



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 10/153 (6%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+ LGI     +    I++   +E   E   I      F M      S     ND     
Sbjct: 353 AERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQPT---FLMAHPAEISPLARRNDENPDV 408

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMP 534
             +++L   G EI +G    + +E   + F     +KE  ++           A + G+P
Sbjct: 409 TDRFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           P  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|222152138|ref|YP_002561298.1| lysyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222121267|dbj|BAH18602.1| lysyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 495

 Score =  210 bits (534), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 76/376 (20%), Positives = 150/376 (39%), Gaps = 28/376 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   +  S V ++G +   R  G   F  ++D  G  Q+    D+   E      S  +
Sbjct: 51  ELHDKEAESHVAIAGRIMTKRGKGKAGFAHVKDLEGQIQIYVRKDAVGDEQFDLWNSADL 110

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             I G+      E +     TG++ + A    +L+ A   PLP           R++ R+
Sbjct: 111 GDIVGV------EGVMFKTNTGELSVKATSFTMLAKALR-PLPDKFHGLQDIEQRYRQRY 163

Query: 131 LDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQ 188
           LDL   D   +  + R++II  MR  + A+ F+E  TP++ T +    AR F+       
Sbjct: 164 LDLITSDESTQTFITRSKIIQEMRSYLNAKGFLEVETPMMHTIAGGAAARPFVTHHNALD 223

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + +D
Sbjct: 224 MELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP-EFTMIELYEAYADYND 281

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I++  E ++  + E+ +   TV+ +   I      RR+            M +  + F  
Sbjct: 282 IMDLTEEMVAYIAEKVTGSTTVTYDGEEIQLAPKWRRWH-----------MVDAVKEFTG 330

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA---YIFWRLDE 365
            +   F  + +    + +          N  +   +NE+   + +  L    +I+    E
Sbjct: 331 VD---FYNVNTDEEAHTLAKEHGVEVKPNMKYGHVLNEFFEQKVEEHLVQPTFIYGHPVE 387

Query: 366 SGNVAGMGPVAKHLNI 381
              +A   P  K    
Sbjct: 388 VSPLAKQNPEDKRFTD 403



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 5/130 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  +      +  P       K N        +++L     E A+     +  
Sbjct: 366 FFEQKVEE-HLVQPTFIYGHPVEVSPLAKQNPEDKRFTDRFELFIVRREHANAFTELNDP 424

Query: 502 EVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               Q F      K    +           A + GMPP GG+  GIDR+VMLL  + ++R
Sbjct: 425 IDQKQRFLAQMEEKAQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSASIR 484

Query: 558 EVSLFPMSQN 567
           +V LFP  ++
Sbjct: 485 DVLLFPYMRH 494


>gi|237729830|ref|ZP_04560311.1| lysyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226908436|gb|EEH94354.1| lysyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 505

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 75/364 (20%), Positives = 134/364 (36%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHADFDAKENEELEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I+  +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQIMAGIRQFMVGRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +       V               YG +  D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQNVLGTTEVP--------------YGEEVFD 319

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEW 347
              P     + E             L      +  A        K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIQKYRPETNMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 70/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   +M D D+      D  K  + +   +   +  LG I    FE
Sbjct: 323 PFEKLTMREAIQKYRPETNMADLDNF-----DSAKAIAESIGIKVEKSWGLGRIVTEIFE 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND       +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F +   +K+  ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFQDQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|21231301|ref|NP_637218.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66768647|ref|YP_243409.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|39932239|sp|Q9L3G6|SYK_XANCP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81305381|sp|Q4UU84|SYK_XANC8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|7688055|emb|CAB89697.1| putative lysyl tRNA synthetase [Xanthomonas campestris pv.
           campestris]
 gi|21112955|gb|AAM41142.1| putative lysyl tRNA synthetase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573979|gb|AAY49389.1| putative lysyl tRNA synthetase [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 505

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 67/302 (22%), Positives = 120/302 (39%), Gaps = 25/302 (8%)

Query: 5   RTHSCGDLGVS-------------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           RTH  GDL                     V+L+G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  RTHFAGDLQAEFAEAETWTAEALEAADRSVKLAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              +           + +     G +++           TG++ + A  + +L+ +   P
Sbjct: 101 LQGNVLG-----DAYTAFKGWDVGDIVAVEGGL--TRTKTGELSVKATALRLLTKSLR-P 152

Query: 112 LPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP           R++ R++DL       +  +KR++II ++R  + A  F+E  TP++ 
Sbjct: 153 LPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAIRAWLDARRFLEVETPMMH 212

Query: 171 -ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   +  
Sbjct: 213 YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRH 271

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  L++  ++    +I++  E V+R   +       VS +   I    A RR+  D
Sbjct: 272 NP-EFTMLELYEAYATYHEIMDLTEQVIRDTAQGVLGTTQVSWDGADIDLAPAFRRWRMD 330

Query: 290 KP 291
           + 
Sbjct: 331 EA 332



 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
           + +D       +++L  NG E+A+G    +  E     F     +K+       +     
Sbjct: 402 RASDTEPGYTDRFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMHYDADY 461

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 462 IRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|261867764|ref|YP_003255686.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413096|gb|ACX82467.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 502

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 64/301 (21%), Positives = 122/301 (40%), Gaps = 12/301 (3%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L    +   V ++G +   R  G   F+ I+D  G  Q+    ++    + K     W L
Sbjct: 57  LKEKHI--EVTVAGRIMTRRAMGKATFITIQDMSGKIQLYVARNNLPEGVYKDDVGHWDL 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++            T ++ + A K+++L+ A   PLP        + +R++ R+L
Sbjct: 115 ---GDIVGIKGSLF--KTKTDELTVKATKVQLLTKALR-PLPDKFHGLTDQEVRYRQRYL 168

Query: 132 DLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +    +  + R++++  +R   +++ F+E  TP+L        AR F+        
Sbjct: 169 DLISNEESRRTFIIRSKVVAGIREYFLSKGFMEVETPMLQVIPGGAAARPFVTHHNALDV 228

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+
Sbjct: 229 DMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDL 286

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++  E +LR +         V    L   +     R       ++       V E     
Sbjct: 287 MDNTEELLRKLAINILGTTIVKYGDLEFDFGKPFERITLHDATIKYGAEKGIVKEDLYDF 346

Query: 310 E 310
           +
Sbjct: 347 D 347



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 10/154 (6%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+ LGI     +    I++   +E   E   I      F M      S     ND     
Sbjct: 353 AERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQPT---FLMAHPAEISPLARRNDENPEV 408

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMP 534
             +++L   G EI +G    + +E     F     +KE  ++           A + G+P
Sbjct: 409 TDRFELFIGGREIGNGFSELNDAEDQNDRFDAQVAAKEAGDDEAMFKDEDFVIALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           P  G   GIDR+ ML   A ++R+V LFP  +  
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQR 502


>gi|30961858|gb|AAP40013.1| lysine tRNA synthetase [Citrobacter freundii]
          Length = 505

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 75/364 (20%), Positives = 134/364 (36%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHADFDAKENEELEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I+  +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQIMAGIRQFMVGRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +       V               YG +  D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQNVLGTTEVP--------------YGEEVFD 319

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEW 347
              P     + E             L      +  A        K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIQKYRPETNMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 70/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   +M D D+      D  K  + +   +   +  LG I    FE
Sbjct: 323 PFEKLTMREAIQKYRPETNMADLDNF-----DSAKAIAESIGIKVEKSWGLGRIVTEIFE 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND       +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPTEVSPLARRNDENPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F +   +K+  ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFQDQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|227509315|ref|ZP_03939364.1| lysyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227191245|gb|EEI71312.1| lysyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 501

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 75/394 (19%), Positives = 150/394 (38%), Gaps = 39/394 (9%)

Query: 2   HRY-RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RT+    L             ++   V ++G +   R  G + F D++D  G  Q+
Sbjct: 31  HRFQRTYLATQLHDEFDNTDKDDLMNLNKKVTVAGRMMAKRGKGKVGFADLKDRTGKIQI 90

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    +I    +   +    G  +  S + I  ++  G++ + A+ +  LS A   
Sbjct: 91  YVRKDIVGDDIYHIFKRSDI----GDHLGISGQIIKTDM--GELTVRAESVTFLSKALR- 143

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP        +  +++ R+LDL  +        KR+ II ++R  + + +++E  TP+L
Sbjct: 144 PLPDKWHGLQDQEQKYRQRYLDLISNQDSFDRFHKRSHIITAIRNYLDSHDYLEVETPVL 203

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + L+  G +R ++I   FR+E   + 
Sbjct: 204 HNQAGGANARPFITHHNALNIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGMDTR 262

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  L+  +++ +  D+++  E + +   +  +              DD +  Y  
Sbjct: 263 HNP-EFTMLESYVAYYDFHDVMDETEGIFKAAAKTVT--------------DDGMITYQG 307

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
              DL  P    ++ +         F K +  +   ++                 +N + 
Sbjct: 308 HTIDLDKPFKRQHMVDAIKEYTGIDFWKPMDDDAAKKLADEHHIHYEPWWKTGHIINAFF 367

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
               QP L    +     G+   + P+AK     
Sbjct: 368 EELVQPKLEQPTFIY---GHPVEISPLAKKNAED 398



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 4/120 (3%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K++     +  P       K N        +++L     E A+     +      Q F  
Sbjct: 374 KLEQPTFIYGHPVEISPLAKKNAEDPRFTDRFELYILTNEFANAFTELNDPIDQRQRFEA 433

Query: 511 VGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
               ++   +   G       A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  +
Sbjct: 434 QVKERQEGNDEAEGIDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTMR 493


>gi|315634627|ref|ZP_07889911.1| lysine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476575|gb|EFU67323.1| lysine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 502

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 69/297 (23%), Positives = 126/297 (42%), Gaps = 21/297 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L    +   V ++G +   R  G   F+ I+D  G  Q+    D+    +       W L
Sbjct: 57  LKEQHI--EVAVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYGDDVGHWDL 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++            T ++ + A  +++L+ A   PLP        + +R++ R+L
Sbjct: 115 ---GDIVGVKGSLF--KTKTNELTVKATDVQLLTKALR-PLPDKFHGLTDQEVRYRQRYL 168

Query: 132 DLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +    +  + R++++  +R   I++ F+E  TP+L        AR F+        
Sbjct: 169 DLISNEESRRTFIIRSKVVAGIRDYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDV 228

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+
Sbjct: 229 DMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDL 286

Query: 250 LNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           ++  E +LR +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 287 MDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDL 343



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 12/180 (6%)

Query: 396 GDSCFFIAGDPLKFCSFAADA-RNH-IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            D+      D         D  R   +A  LGI     +    I++   +E   E   I 
Sbjct: 326 HDATIKYGADKGIVKEDLYDIDRAKAVAARLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQ 384

Query: 454 FAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                F M      S     ND       +++L   G EI +G    + +E   + F   
Sbjct: 385 PT---FLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQ 441

Query: 512 GISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 442 VAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|323141547|ref|ZP_08076432.1| lysine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413959|gb|EFY04793.1| lysine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 656

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 77/345 (22%), Positives = 149/345 (43%), Gaps = 29/345 (8%)

Query: 4   YR---THSCGDLGV-----SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           YR   TH   D+       S+  + V+++G +  +R HG   F+D++D  G  QV    D
Sbjct: 45  YRFLYTHRAADIAAQFDELSEKETEVKMAGRIMAIRGHGKTCFMDMQDKTGRIQVYVRKD 104

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E    ++   +    G+               G++ + A  +E+LS +   PLP  
Sbjct: 105 VIGEENYALIKLMDIGDTVGI------TGTAFRTHMGELSIKANSVEMLSKSLR-PLPEK 157

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASS 173
                    R++ R++DL  +   ++  VKR++II S+R  + + +F+E  TPIL T + 
Sbjct: 158 WHGLKDVETRYRQRYVDLIVNPEVRDTFVKRSQIIRSVREVLDSHDFLEVETPILNTIAG 217

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y +  AP+ Y + L+  G DR +++   FR+E    +R   E
Sbjct: 218 GAAARPFISYHNALDMQVY-MRIAPELYLKRLIVGGMDRVYEMGRVFRNEGID-NRHNPE 275

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIR 284
           F  +++  +F +  D+++  E V+    E+     T++           + R+   +A++
Sbjct: 276 FTSVEIYQAFADYRDMMDLTEEVVVKTAEKVLGTTTINYEGTTIELASPWKRMSMIEAVK 335

Query: 285 RY-GTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            Y G D  ++ +      + +    +    F     +N  +E + 
Sbjct: 336 EYSGKDFTNVTDLEEARAIAKELNVAVEPSFGIGKIINACFEEYV 380



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 13/188 (6%)

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463
           G      +   +AR  IA+EL +     F    I++  F E+ E+  K+         P+
Sbjct: 339 GKDFTNVTDLEEAR-AIAKELNVAVEPSFGIGKIINACFEEYVED--KLIQPTFITGHPK 395

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF- 522
                 K N        +++    G EI +G    +      + F      +   +    
Sbjct: 396 EISPLAKSNPENPEITDRFEAYIYGREICNGFTELNDPIDQKERFLKQVEERANGDEEAN 455

Query: 523 ---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP------MSQNFCDLLM 573
                   A + G+PP GG+  GIDR+VM L  +  +R+V  FP       + +     M
Sbjct: 456 MMDEDFVNALEYGLPPTGGLGIGIDRLVMFLTNSSTIRDVLFFPTMKPLGKAVSEKPDFM 515

Query: 574 GSPSTVSV 581
            +P+  + 
Sbjct: 516 QAPAVAAP 523


>gi|331665797|ref|ZP_08366691.1| lysine--tRNA ligase [Escherichia coli TA143]
 gi|331056848|gb|EGI28842.1| lysine--tRNA ligase [Escherichia coli TA143]
          Length = 505

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDKLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 426 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|260599229|ref|YP_003211800.1| lysyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260218406|emb|CBA33489.1| Lysyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 505

 Score =  209 bits (533), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 76/364 (20%), Positives = 134/364 (36%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHADFDGKENEELEALNIEVCVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGARGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL   D   K    R++I+  +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLIANDESRKTFKARSQILAGIRQFMVGRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFVTHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V               YG +  D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQEVLGTTQVP--------------YGEETFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++              +   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDDFEKAKGIAQAVGIKIEKSWGLGRVVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 68/203 (33%), Gaps = 30/203 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
            +     + K+    +   +      +         G  ++           I +E  + 
Sbjct: 326 KLTMREAIKKYRPETDMADLDDFEKAK---GIAQAVGIKIEKSWGLGRVVTEIFEE--VA 380

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             +  +  +I ++P               +P          +           +++    
Sbjct: 381 EAHLIQPTFITEYP------------AEVSPLARRNDENPEITD---------RFEFFIG 419

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGI 543
           G EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  GI
Sbjct: 420 GREIGNGFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGI 479

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR+VML   +  +R+V LFP  +
Sbjct: 480 DRMVMLFTNSHTIRDVILFPAMR 502


>gi|119897778|ref|YP_932991.1| lysyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|166229792|sp|A1K5J9|SYK_AZOSB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|119670191|emb|CAL94104.1| lysyl-tRNA synthetase [Azoarcus sp. BH72]
          Length = 500

 Score =  209 bits (533), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 115/280 (41%), Gaps = 20/280 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            VR++G V   R  G   F+ I+D  G  Q+    D    ++    +   +  I G V  
Sbjct: 65  EVRVAGRVMLKRVMGKASFITIQDLSGRIQLYVQRDGVGEDVYADFKHWDIGDIVGCV-- 122

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                      TG++ + A +I +L+ +   PLP           +++ R+LDL      
Sbjct: 123 ----GTLFKTKTGELTVKASEIRLLTKSLR-PLPDKFHGLTDVEQKYRQRYLDLIMSEQT 177

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
           +     R+R++ S+R  MI   F+E  TP++        A+ F+          + L  A
Sbjct: 178 RFTFVARSRMVQSIRNYMINHGFLEVETPMMHPIPGGAAAKPFVTHHNALDMELF-LRIA 236

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  G ++ F++   FR+E   S R   EF  ++   ++ +   ++N  E ++
Sbjct: 237 PELYLKRLVVGGLEKVFEVNRNFRNEGL-SPRHNPEFTMMEFYEAYADYRSLMNFTEGLI 295

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGT 288
           R    E     +          S  F R+    AIR+Y  
Sbjct: 296 RQAAREALGAESFVYQGRELDLSKPFHRLTIVQAIRKYHP 335



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 25/143 (17%)

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
               +E  +I+D+P                            + +D       +++L   
Sbjct: 377 EAELWEPTFIIDYP---------------------VEVSPLARASDSNPEITERFELFIV 415

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGI 543
           G EIA+G    +  E     F     +KE  +           RA + G+PP GG   GI
Sbjct: 416 GREIANGFSELNDPEDQAARFLAQAQAKEAGDEEAMYYDADYIRALEFGLPPTGGCGIGI 475

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR+VMLL  + ++R+V LFP  +
Sbjct: 476 DRLVMLLTDSASIRDVILFPQMR 498


>gi|258510227|ref|YP_003183661.1| lysyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257476953|gb|ACV57272.1| lysyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 495

 Score =  209 bits (533), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 86/431 (19%), Positives = 160/431 (37%), Gaps = 40/431 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   D+     G            VR++G +   R HG   F  + D  G  Q+ A  D
Sbjct: 32  THHAADIHRFGEGKDQAELERENLRVRIAGRLVARRGHGKATFAVLNDVTGNIQIYAKYD 91

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E     +    L   G ++         N   G+I + A+++  L+ +   PLP  
Sbjct: 92  VLGPEAYDVFQH---LVDLGDILGVEGTVFRTN--RGEITVLAEQVTFLTKSLR-PLPEK 145

Query: 116 GEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASS 173
                    R++ R+LDL  +  + +  + R+RII  +R  +  + F+E  TP L T +S
Sbjct: 146 WHGLKDVETRYRQRYLDLIVNPDVRQIFIARSRIIQEIRRFLDGQGFLEVETPTLHTVAS 205

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + + + L+  G +R ++I   +R+E   +   P E
Sbjct: 206 GAHARPFITHHNALDMDLY-LRIAIELHLKRLIVGGLERVYEIGRVYRNEGVSTRHNP-E 263

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  L++  ++ +  DI++  EN++R   +       +               YG    DL
Sbjct: 264 FTMLELYQAYADFHDIMDLTENMVRHAAKAVIGKLHLP--------------YGDHVVDL 309

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
            +P    ++ +  +      F ++ S      + A        +  +   +NE+   + +
Sbjct: 310 ESPFKRAHIADLVLEHTGVDFRRVTSDEEARRLAAEHGVKIEPHMTYGHILNEFFEQRVE 369

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL---DMQDGDSCFFIAGDPLKFC 410
             L    +     G+   + P+AK          R  L     +  ++   +     +  
Sbjct: 370 DKLIQPTFVY---GHPVEISPLAKKNADDPRFTDRFELFIVGREHANAFSELNDPIDQRE 426

Query: 411 SFAADARNHIA 421
            F A  R   A
Sbjct: 427 RFLAQLREKEA 437



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 5/133 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   E+K I          +    + K  D       +++L   G E A+     +  
Sbjct: 363 FFEQRVEDKLIQPTFVYGHPVEISPLAKKNAD-DPRFTDRFELFIVGREHANAFSELNDP 421

Query: 502 EVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      KE      +        A + GMPP GG+  GIDR+VMLL G  ++R
Sbjct: 422 IDQRERFLAQLREKEAGNEEAQALDEDFLTALEHGMPPTGGLGVGIDRLVMLLTGQPSIR 481

Query: 558 EVSLFPMSQNFCD 570
           +V LFP+ +   D
Sbjct: 482 DVLLFPLMRERQD 494


>gi|255657502|ref|ZP_05402911.1| lysyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296452826|ref|ZP_06894513.1| lysine--tRNA ligase [Clostridium difficile NAP08]
 gi|296879922|ref|ZP_06903894.1| lysine--tRNA ligase [Clostridium difficile NAP07]
 gi|296258374|gb|EFH05282.1| lysine--tRNA ligase [Clostridium difficile NAP08]
 gi|296429036|gb|EFH14911.1| lysine--tRNA ligase [Clostridium difficile NAP07]
          Length = 509

 Score =  209 bits (533), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 73/350 (20%), Positives = 137/350 (39%), Gaps = 26/350 (7%)

Query: 3   RY-RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           RY RTH   ++     S  G   +++G +   R  G   F+DI+D  G  Q     D+  
Sbjct: 43  RYDRTHYSMEIKDNFESLEGKTTKIAGRIMSKRIQGKAGFIDIQDQEGRIQSYVRLDAIG 102

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E      +  +  I G+      E        G+I + A+ + +L  + +  LP     
Sbjct: 103 EEEYSVFSTYDIGDIVGI------EGEIFKTKKGEISVKAKSVVLLCKSLQ-VLPEKYHG 155

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + +R++ R++DL  +   KN    RT+ + ++R  +    F+E  TPIL T +    
Sbjct: 156 LKDQELRYRQRYVDLIVNPEVKNAFLIRTKALKALRAYLDDRGFLEVETPILNTIAGGAN 215

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + Y + L+  GFD+ +++   FR+E       P E+  
Sbjct: 216 ARPFITNHNTLHIPMY-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDLKHNP-EYTA 273

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +++  ++ +  D++   ENV+  + E  +    V+     I +    +R           
Sbjct: 274 IELYQAYADYTDMMEITENVIAHMAEVATGSMIVNYQGTEINFTPPWKR----------- 322

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           + M +  + +   +F   +             I  K G       +   E
Sbjct: 323 MSMEDCVKEYSGVDFSTINTDEEALEVAREKGIEIKPGMRRGEVINAFFE 372



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 69/171 (40%), Gaps = 16/171 (9%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---HNPFTMPQGGMESLKGNDL 474
             +A+E GI          +++  F+E   E+K I      H+P  +      +    D 
Sbjct: 347 LEVAREKGIEIKPGMRRGEVINA-FFEEFGEDKLIQPTFITHHPVEVSPLSKRN--AEDP 403

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVML----QAFSNVGISKEVVENRFGGLYRAFQ 530
              +  ++++  N +E+A+     +                 +  +          +A +
Sbjct: 404 R--RTDRFEVFANKWELANAFSELNDPIDQKGRFIDQLRKRELGDDEAFEMDEDFLKALE 461

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
            G+PP GG+  GIDR++MLL  + ++R+V LFP  +     +  +P+    
Sbjct: 462 VGLPPTGGLGIGIDRVIMLLTNSPSIRDVLLFPTMK----PIDNNPNKEEE 508


>gi|239637503|ref|ZP_04678477.1| lysyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596948|gb|EEQ79471.1| lysyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 495

 Score =  209 bits (533), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 65/363 (17%), Positives = 137/363 (37%), Gaps = 26/363 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D     Q+    D    E     +   +  I G+    
Sbjct: 61  VAIAGRIMTKRGKGKAGFAHVQDLSEQIQIYVRKDQIGEEQFDLWKHADLGDIVGV---- 116

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH- 139
             E +     TG++ + A+   +L+ A   PLP           R++ R+LDL  +    
Sbjct: 117 --EGVMFKTNTGELSVKAKSFTLLTKALR-PLPDKFHGLQDIEQRYRQRYLDLITNQDST 173

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           +  + R++II  MR  +  + F+E  TP++   +   A    V       +   +  A +
Sbjct: 174 RTFINRSKIIQEMRNYLNQKGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIE 233

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++  E+++R 
Sbjct: 234 LHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYHDIMDLTESMVRH 292

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           + +E      V  N   I  + + +R             + +  +     +F        
Sbjct: 293 IAQEVLGSAKVQYNGTEIDLESSWKRLH-----------IVDAVKEATGVDFYNVKSDEE 341

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
                +   I       N  +   +NE+   + +  L    +     G+   + P+AK  
Sbjct: 342 AKALAKEHGIEI---TDNMKYGHILNEFFEQKVEETLIQPTFIY---GHPIDISPLAKKN 395

Query: 380 NIV 382
              
Sbjct: 396 PED 398



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSI 477
           +A+E GI   +  ++  I++  F+E   EE  I      F        S   K N     
Sbjct: 345 LAKEHGIEITDNMKYGHILN-EFFEQKVEETLIQPT---FIYGHPIDISPLAKKNPEDPR 400

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
              +++L   G E A+     +      + F    + KE               A + GM
Sbjct: 401 FTDRFELFIVGREHANAFTELNDPIDQKERFEAQLVEKEQGNDEAHEMDEDYIEALEYGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 461 PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQ 494


>gi|302390919|ref|YP_003826739.1| lysyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302202996|gb|ADL11674.1| lysyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 491

 Score =  209 bits (533), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 72/319 (22%), Positives = 142/319 (44%), Gaps = 26/319 (8%)

Query: 5   RTHSCGDL-----GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           R+H   ++      + +  + VRL+G +  VR HG   F DI D  G  Q+ A  D+   
Sbjct: 35  RSHVAQEVIDNFEELKEDETEVRLTGRLMAVREHGKASFADIEDMSGRIQLYAKEDNLGE 94

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           ++ +   S  +    G+      E +      G++ +  +  E+L+ A   PLP      
Sbjct: 95  DLYELFMSLDIGDQIGI------EGLLFKTGRGEVTVQIENFELLAKALR-PLPEKWHGL 147

Query: 120 YPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
               +R++ R++DL  ++ +    V R++II++MR  +  E+F+E  TP++   +    A
Sbjct: 148 KDVEMRYRQRYVDLIVNSDVRNTFVLRSKIIHTMREHLEEEDFLEVETPLMHPIAGGAEA 207

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R F+          Y L  AP+ Y + L+  GF++ F+I    R+E   +   P EF  +
Sbjct: 208 RPFVTHHNALDMDLY-LRIAPELYLKRLIVGGFEKVFEIGKNLRNEGISTKHNP-EFTSM 265

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-G 287
           ++  +  + +D++   E+V+  + +E      +  +         + R+   +AI  Y G
Sbjct: 266 ELYQANADYEDMMEITESVIVNIAQEVLGTLEIEYDGQEIDLSPSWTRMTMREAINEYAG 325

Query: 288 TDKPDLRNPIIMHNVTEHF 306
            D  ++ +      + E  
Sbjct: 326 VDFSEVDDFKTAQKLAEDH 344



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++L   G E+A+     +      Q F      +E  ++          RA + GMP
Sbjct: 397 TERFELFVAGNELANAFSELNDPIDQKQRFKEQMEQREAGDDEAHMMDYDYIRALEYGMP 456

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P GG+  GIDR+VMLL  + ++R+V LFP  +
Sbjct: 457 PTGGLGIGIDRLVMLLTDSTSIRDVILFPHMR 488


>gi|52425598|ref|YP_088735.1| lysyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81386871|sp|Q65SB0|SYK_MANSM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|52307650|gb|AAU38150.1| LysU protein [Mannheimia succiniciproducens MBEL55E]
          Length = 503

 Score =  209 bits (533), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 71/289 (24%), Positives = 126/289 (43%), Gaps = 23/289 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-KSVRSEW 69
            L   D+   V ++G +   R  G   F+ I+D  G  Q+    D+    +  + V+S  
Sbjct: 56  QLKEKDL--HVAVAGRIMTRRTMGKATFITIQDMSGKIQLYVARDNLPEGVYGEDVKSWD 113

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           +  I G+      +       T ++ + A ++++L+ A   PLP        +  R++ R
Sbjct: 114 LGDIVGI------KGTLFKTKTNELTVKAHEVQLLTKALR-PLPDKFHGLSDQETRYRQR 166

Query: 130 FLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +    +  V R+++I  +R   I + FIE  TP+L        AR F+      
Sbjct: 167 YLDLISNEESRRTFVIRSKVIAGIREYFIGKGFIEVETPMLQVIPGGAAARPFVTHHNAL 226

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +  
Sbjct: 227 DIDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMIEYYQAYADYH 284

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYG 287
           D+++  E +LR +  +      V            F RI   DA+ +YG
Sbjct: 285 DLMDNTEELLRKLALDILGTTIVPYGEYEFDFGKPFERITMHDAVIKYG 333



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 67/181 (37%), Gaps = 12/181 (6%)

Query: 395 DGDSCFFIAGDPLKFCSFAADA-RNHIAQ-ELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
             D+      +         D  R   A  +LGI     +    I++   +E   E   I
Sbjct: 325 MHDAVIKYGAEKGIVKEDLYDLDRAKAAAAKLGIEIQKSWGLGSIVNA-IFEEVAEHHLI 383

Query: 453 DFAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                 F M      S     ND       +++L   G EI +G    + +E   + F  
Sbjct: 384 QPT---FLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAERFDA 440

Query: 511 VGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              +K+  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  +
Sbjct: 441 QVAAKDAGDDEAMFKDDDFVTALEHGLPPTAGEGLGIDRLAMLFANAPSIRDVILFPAMK 500

Query: 567 N 567
           +
Sbjct: 501 H 501


>gi|312623017|ref|YP_004024630.1| lysyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203484|gb|ADQ46811.1| lysyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 497

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 72/322 (22%), Positives = 135/322 (41%), Gaps = 24/322 (7%)

Query: 6   THSCGDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   D+  +     G FV ++G +   R HG   F+DI D  G  Q+    D    E  
Sbjct: 43  THYSTDIKENFEVFEGKFVCVAGRMLSKRGHGKASFVDILDTKGKIQIYIKIDEVGEEKY 102

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  +  + +   G ++    E        G+I + A++IE+L+     PLP         
Sbjct: 103 EEFKEYYDI---GDIIGVKGEVF--KTHKGEISVKAKEIEMLTKCLR-PLPEKWHGLKDV 156

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL  +   ++  +KR+ II S+R  +    F+E  TP+L+  +    AR F
Sbjct: 157 DTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFLDDRGFLEVETPVLSPVAGGAAARPF 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + + + L+  GFD+ +++   FR+E       P EF  +++ 
Sbjct: 217 ITHHNALDIDLY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIY 274

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKP 291
            ++ +  D+++  E ++  V +E      ++           + R+   +AI +Y     
Sbjct: 275 QAYADYKDMMDLTEKLITTVAQEVLGTLKITYQGQEIDLTPPWQRLTMVEAINKY--VGV 332

Query: 292 DLRNPIIMHNVTEHFVHSEFRV 313
           D  N   +    +        V
Sbjct: 333 DFENVTSLDEARKIAKDLGIEV 354



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 7/161 (4%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
            +   +AR  IA++LGI     ++   I++   +E   E+  +          +    + 
Sbjct: 337 VTSLDEAR-KIAKDLGIEVEENWQIGHIIN-EIFEKKVEDFLVQPTFIMDYPVEVSPLAK 394

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
           +  D       +++L     EIA+     +      + F      ++             
Sbjct: 395 RKKDNPQF-TERFELFITCREIANAFSELNDPFDQKERFLEQLKERQRGNQEAHMMDEDF 453

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+VMLL  + ++R+V LFP  +
Sbjct: 454 IEALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFPTMR 494


>gi|134296299|ref|YP_001120034.1| lysyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166229801|sp|A4JFZ6|SYK_BURVG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|134139456|gb|ABO55199.1| lysyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 508

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 65/308 (21%), Positives = 122/308 (39%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   +L  +   S           V ++G +   R  G   F  ++D  G  Q    P+
Sbjct: 43  THHAAELQSTYADSDKAALEANPVEVSVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPN 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +  +++ +L+ A   PLP  
Sbjct: 103 DVGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVQCKELRLLAKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + +R++ R++DL            RT+ I+S+R  M   +F+E  TP+L     
Sbjct: 156 FHGLADQEMRYRQRYVDLIVTPETRDTFRARTKTISSIRRFMENADFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFITHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T+            F R+    AI+
Sbjct: 274 FTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFHRLTITQAIQ 333

Query: 285 RYGTDKPD 292
           +Y     D
Sbjct: 334 KYAPQYTD 341



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +  +     P       + +D +     +++L   G EIA+G    +  
Sbjct: 378 LFEETAESQLWEPTY-IIDYPVEVSPLARASDTVPGITERFELFMTGREIANGFSELNDP 436

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      K+  +           RA + GMPP GG   GIDR+VMLL  +  +R
Sbjct: 437 EDQAARFKKQVEQKDAGDEEAMFFDADYIRALEHGMPPTGGCGIGIDRLVMLLTDSPTIR 496

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 497 DVLLFP 502


>gi|188991535|ref|YP_001903545.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|229559863|sp|B0RSQ8|SYK_XANCB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|167733295|emb|CAP51494.1| lysyl-tRNA synthetase heat inducible [Xanthomonas campestris pv.
           campestris]
          Length = 505

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 67/302 (22%), Positives = 120/302 (39%), Gaps = 25/302 (8%)

Query: 5   RTHSCGDLGVS-------------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           RTH  GDL                     V+L+G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  RTHFAGDLQAEFAEAETWTAEALEAADRSVKLAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              +           + +     G +++           TG++ + A  + +L+ +   P
Sbjct: 101 LQGNVLG-----DAYTAFKGWDVGDIVAVEGGL--TRTKTGELSVKASALRLLTKSLR-P 152

Query: 112 LPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP           R++ R++DL       +  +KR++II ++R  + A  F+E  TP++ 
Sbjct: 153 LPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAIRAWLDARRFLEVETPMMH 212

Query: 171 -ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   +  
Sbjct: 213 YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRH 271

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  L++  ++    +I++  E V+R   +       VS +   I    A RR+  D
Sbjct: 272 NP-EFTMLELYEAYATYHEIMDLTEQVIRDTAQGVLGTTQVSWDGADIDLAPAFRRWRMD 330

Query: 290 KP 291
           + 
Sbjct: 331 EA 332



 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
           + +D       +++L  NG E+A+G    +  E     F     +K+       +     
Sbjct: 402 RASDTEPGYTDRFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMHYDADY 461

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 462 IRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|215489478|ref|YP_002331909.1| lysyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|215267550|emb|CAS12004.1| lysine tRNA synthetase, inducible [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 505

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 139/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG + +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGALSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGIMVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +         P       + ND+      +++    G EI +G    + +E   + F
Sbjct: 381 EAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAERF 440

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K   ++           A + G+PP  G+  GIDR++ML   +  +R+V LFP 
Sbjct: 441 QEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFPA 500

Query: 565 SQ 566
            +
Sbjct: 501 MR 502


>gi|16766341|ref|NP_461956.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56414986|ref|YP_152061.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62181550|ref|YP_217967.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161615987|ref|YP_001589952.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167550076|ref|ZP_02343833.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167994103|ref|ZP_02575195.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168231145|ref|ZP_02656203.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168236099|ref|ZP_02661157.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168242827|ref|ZP_02667759.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168261798|ref|ZP_02683771.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168463792|ref|ZP_02697709.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168823069|ref|ZP_02835069.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194443381|ref|YP_002042292.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194450411|ref|YP_002047025.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194471972|ref|ZP_03077956.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194472758|ref|ZP_03078742.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194736687|ref|YP_002115990.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197250263|ref|YP_002147953.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197265303|ref|ZP_03165377.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197363915|ref|YP_002143552.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|198242473|ref|YP_002217018.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|200387283|ref|ZP_03213895.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204928085|ref|ZP_03219285.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205353964|ref|YP_002227765.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207858303|ref|YP_002244954.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|213161325|ref|ZP_03347035.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
 gi|213425819|ref|ZP_03358569.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|213583165|ref|ZP_03364991.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
 gi|238909839|ref|ZP_04653676.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|17865728|sp|P28354|SYK1_SALTY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|75481018|sp|Q57K76|SYK_SALCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81361439|sp|Q5PL30|SYK_SALPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189082967|sp|A9N3L6|SYK_SALPB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710925|sp|B5F5G4|SYK_SALA4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710926|sp|B5FUF3|SYK_SALDC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710927|sp|B5QXG7|SYK_SALEP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710928|sp|B5RE01|SYK_SALG2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710929|sp|B4T535|SYK_SALNS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238690649|sp|B4TGW0|SYK_SALHS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238690720|sp|B5BFK5|SYK_SALPK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238693697|sp|B4TUQ8|SYK_SALSV RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|16421590|gb|AAL21915.1| constitutive lysine tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56129243|gb|AAV78749.1| lysyl tRNA synthetase (LysRS) [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62129183|gb|AAX66886.1| lysine tRNA synthetase, constitutive [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161365351|gb|ABX69119.1| hypothetical protein SPAB_03787 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402044|gb|ACF62266.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194408715|gb|ACF68934.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194458336|gb|EDX47175.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194459122|gb|EDX47961.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194712189|gb|ACF91410.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195633136|gb|EDX51550.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197095392|emb|CAR60951.1| lysyl tRNA synthetase (LysRS) [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197213966|gb|ACH51363.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197243558|gb|EDY26178.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197290865|gb|EDY30219.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197936989|gb|ACH74322.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199604381|gb|EDZ02926.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204322407|gb|EDZ07604.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205273745|emb|CAR38740.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205324787|gb|EDZ12626.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205328003|gb|EDZ14767.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205334471|gb|EDZ21235.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205338151|gb|EDZ24915.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205340632|gb|EDZ27396.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205349204|gb|EDZ35835.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206710106|emb|CAR34461.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|261248172|emb|CBG26008.1| LysRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267995194|gb|ACY90079.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301159596|emb|CBW19115.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312914061|dbj|BAJ38035.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|320087469|emb|CBY97234.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|321225715|gb|EFX50769.1| Lysyl-tRNA synthetase class II [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322613438|gb|EFY10379.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322621030|gb|EFY17888.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322624094|gb|EFY20928.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322628167|gb|EFY24956.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322633286|gb|EFY30028.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322636136|gb|EFY32844.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322639475|gb|EFY36163.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322647593|gb|EFY44082.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322648777|gb|EFY45224.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322653832|gb|EFY50158.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322657938|gb|EFY54206.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322664041|gb|EFY60240.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322668948|gb|EFY65099.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322673058|gb|EFY69165.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322677951|gb|EFY74014.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322681127|gb|EFY77160.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322687943|gb|EFY83910.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|322716031|gb|EFZ07602.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323131396|gb|ADX18826.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|323194861|gb|EFZ80048.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323196612|gb|EFZ81760.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323202688|gb|EFZ87728.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323207825|gb|EFZ92771.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323212623|gb|EFZ97440.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323214894|gb|EFZ99642.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323222625|gb|EGA06990.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323225096|gb|EGA09348.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323230618|gb|EGA14736.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323235031|gb|EGA19117.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323239070|gb|EGA23120.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323244572|gb|EGA28578.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323247187|gb|EGA31153.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323253330|gb|EGA37159.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323256363|gb|EGA40099.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323262461|gb|EGA46017.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323267443|gb|EGA50927.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323269153|gb|EGA52608.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
 gi|326624785|gb|EGE31130.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
 gi|326629078|gb|EGE35421.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
 gi|332989907|gb|AEF08890.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 505

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 74/345 (21%), Positives = 136/345 (39%), Gaps = 29/345 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L  
Sbjct: 61  LEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDL 174

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  K R++I+  +R  M+A  F+E  TP++        AR F+          
Sbjct: 175 ISNDESRNTFKTRSKILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV---- 307
             E++ R + ++      V               YG +  D   P     + E       
Sbjct: 293 LTESLFRTLAQDVLGTTQVP--------------YGDEVFDFGKPFEKLTMREAIKKYRP 338

Query: 308 HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQ 351
            ++        S     E   I   K  G  R   +  +E A + 
Sbjct: 339 ETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFDEVAEAH 383



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 69/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F +   +K   ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFLDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|161506412|ref|YP_001573524.1| lysyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|189082966|sp|A9MRI4|SYK_SALAR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|160867759|gb|ABX24382.1| hypothetical protein SARI_04610 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 505

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 74/345 (21%), Positives = 136/345 (39%), Gaps = 29/345 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L  
Sbjct: 61  LEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGAKGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDL 174

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  K R++I+  +R  M+A  F+E  TP++        AR F+          
Sbjct: 175 ISNDESRNTFKTRSKILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV---- 307
             E++ R + ++      V               YG +  D   P     + E       
Sbjct: 293 LTESLFRTLAQDVLGNTQVP--------------YGDEVFDFGKPFEKLTMREAIKKYRP 338

Query: 308 HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQ 351
            ++        S     E   I   K  G  R   +  +E A + 
Sbjct: 339 ETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFDEVAEAH 383



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 69/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F +   +K   ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFQDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|156932659|ref|YP_001436575.1| lysyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|166229806|sp|A7MR65|SYK_ENTS8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|156530913|gb|ABU75739.1| hypothetical protein ESA_00442 [Cronobacter sakazakii ATCC BAA-894]
          Length = 505

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 75/364 (20%), Positives = 134/364 (36%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHADFDGKENEELEALNIEVCVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDILGARGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL   D   K    R++I+  +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLIANDESRKTFKVRSQILAGIRQFMVGRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFVTHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V               YG +  D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTTQVP--------------YGEETFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        ++              +   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDLADLDDFEKAKGIAQAVGIKVEKSWGLGRVVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 68/203 (33%), Gaps = 30/203 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
            +     + K+    +   +      +         G  ++           I +E  + 
Sbjct: 326 KLTMREAIKKYRPETDLADLDDFEKAK---GIAQAVGIKVEKSWGLGRVVTEIFEE--VA 380

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             +  +  +I ++P               +P          +           +++    
Sbjct: 381 EAHLIQPTFITEYP------------AEVSPLARRNDENPEITD---------RFEFFIG 419

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGI 543
           G EI +G    + +E   Q F +   +K+  ++           A + G+PP  G+  GI
Sbjct: 420 GREIGNGFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGI 479

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR+VML   +  +R+V LFP  +
Sbjct: 480 DRMVMLFTNSHTIRDVILFPAMR 502


>gi|126658229|ref|ZP_01729379.1| lysyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126620378|gb|EAZ91097.1| lysyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 573

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 60/323 (18%), Positives = 131/323 (40%), Gaps = 21/323 (6%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVL 71
            +V   + ++G +   R  G + F +++D  G  Q+  +     S   E+  +      L
Sbjct: 62  EEVDVDIAIAGRIIARRVFGKLAFFNLQDETGTIQLYLDKKEIQSHMSELENAFNHLKKL 121

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++             G++ +  ++ +IL+ +  LPLP           R++ R++
Sbjct: 122 TDTGDIIGVKGSIKRTE--KGELSVKVKQYQILTKSL-LPLPDKWHGLTDTEKRYRQRYV 178

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQG 189
           DL  +   +   + R +I  S+R  +  + FIE  TP+L + +    AR F+      + 
Sbjct: 179 DLIVNPQVRQTFRHRAQITASIRRYLDNQGFIEIETPVLQSEAGGAEARPFITYHNTLEM 238

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A + + + L+  GF++ F++   FR+E   +   P EF  +++  ++ + +D+
Sbjct: 239 DLY-LRIATELHLKRLIVGGFEKVFEMGRIFRNEGVSTKHNP-EFTSIEIYQAYADYNDM 296

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           +   E ++    +E    + ++    +I      RR           + MH + +     
Sbjct: 297 MELTEAIITTAAQEVLGDSKITYQGEKIDISTPWRR-----------VTMHEIVKEKSGL 345

Query: 310 EFRVFSKILSVNPGYEVWAIPAK 332
           +F  F    S     +   +   
Sbjct: 346 DFEKFKDFESAKDAVKNAELEVP 368


>gi|299536697|ref|ZP_07050007.1| lysyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298727811|gb|EFI68376.1| lysyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 497

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 70/392 (17%), Positives = 144/392 (36%), Gaps = 38/392 (9%)

Query: 5   RTHSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   ++                  V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 35  RTHLSTEVREQFADQTKEQLEENLQEVIIAGRIMTKRGKGKAGFAHIQDLNGQIQIYVRQ 94

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +  I G+               G++ + A++   L+ A   P+P 
Sbjct: 95  DHVGEEAYELFKQADLGDIVGV------RGNVFRTQVGELSVKAEEFTFLTKALR-PMPE 147

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R+LDL  +   K   + R++II ++R  +    ++E  TP+L T +
Sbjct: 148 KFHGLQDVEQRYRQRYLDLMTNEDSKKTFITRSKIIRAIRNYLDNAGYLEVETPMLHTIA 207

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 208 GGAAARPFITHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP- 265

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  +F +  DI++  EN++  V +E     +               +YG D+ +
Sbjct: 266 EFTMIELYEAFADYQDIMSLTENLIAHVAQEVLGTTS--------------VQYGEDEIN 311

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
           L       ++ +    +    F + ++      +                 +NE+   + 
Sbjct: 312 LAVGWKRVHMVDAVKEATGVDFWQPMTKEQAQALAKEHGVEVKDVHEVGHIINEFFEQKV 371

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
           +  L    +     G+   + P+AK       
Sbjct: 372 EETLVQPTFVY---GHPVEISPLAKKNPEDER 400



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 6/154 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E G+   +  E   I++  F+E   EE  +      +  P       K N     
Sbjct: 343 QALAKEHGVEVKDVHEVGHIIN-EFFEQKVEET-LVQPTFVYGHPVEISPLAKKNPEDER 400

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
              +++L     E A+     +      Q F      KE               A + GM
Sbjct: 401 FTDRFELFIVRREHANAFTELNDPIDQRQRFEAQMAEKEAGNDEAHEMDNDFIEALEYGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  GIDR++MLL  + ++R+V LFP  ++
Sbjct: 461 PPTGGLGIGIDRLIMLLTNSPSIRDVLLFPTMRH 494


>gi|145631261|ref|ZP_01787034.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983188|gb|EDJ90683.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 502

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 20/299 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G++ + +    V+++G +   R  G   F+ I+D  G  Q+    D+    + K     W
Sbjct: 54  GEI-LKEKNIEVQVAGRIMTRRAMGKATFITIQDMSGKIQLYIARDNLPEGVYKDDVGTW 112

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L   G ++            T ++ +   ++++L+ A   PLP        + +R++ R
Sbjct: 113 DL---GDIVGVKGTLF--KTKTDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQR 166

Query: 130 FLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +    +  + R++++  +R   I++ F+E  TP+L        AR F+      
Sbjct: 167 YLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNAL 226

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  
Sbjct: 227 DVDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYH 284

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           D+++  E +LR +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 285 DLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDL 343



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 12/180 (6%)

Query: 396 GDSCFFIAGDPLKFCSFAADA-RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            D+      D         D  R    A+ LGI     +    I++   +E   E   I 
Sbjct: 326 HDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQ 384

Query: 454 FAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                F M      S     ND       +++L   G EI +G    + +E   + F   
Sbjct: 385 PT---FLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQ 441

Query: 512 GISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 442 VTAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|206578828|ref|YP_002236653.1| lysyl-tRNA synthetase LysS [Klebsiella pneumoniae 342]
 gi|288933630|ref|YP_003437689.1| lysyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|290511304|ref|ZP_06550673.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|206567886|gb|ACI09662.1| lysyl-tRNA synthetase LysS [Klebsiella pneumoniae 342]
 gi|288888359|gb|ADC56677.1| lysyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|289776297|gb|EFD84296.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 505

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 137/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHADFDAKENEELEALNVEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G +++   +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLAEGVYNDQFKKWDL---GDIIAARGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +N  K R++I+  +R  M+   F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILAGIRQFMVGRGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V               YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQDILGNTEVP--------------YGDQVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P     + E        +E        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 70/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   +M D D+      D  K  + +   +   +  LG I    FE
Sbjct: 323 PFEKLTMREAIKKYRPETEMADLDNF-----DSAKAIAESIGIKVEKSWGLGRIVTEIFE 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F +   +K   ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFQDQVDAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|167769659|ref|ZP_02441712.1| hypothetical protein ANACOL_00993 [Anaerotruncus colihominis DSM
           17241]
 gi|167668020|gb|EDS12150.1| hypothetical protein ANACOL_00993 [Anaerotruncus colihominis DSM
           17241]
          Length = 657

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 139/367 (37%), Gaps = 28/367 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F+D+RD  G  Q     D    E     +   +  I G+ 
Sbjct: 66  GREVSIAGRMMSRRIMGKASFIDVRDASGRIQSYVRRDEIGDEPYADFKKWDIGDIVGI- 124

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                         G+I + A +I  L     LPLP          +R++ R++DL  + 
Sbjct: 125 -----RGEVFRTQKGEISIKAHEIT-LLSKSLLPLPEKWHGLKDTELRYRQRYVDLIVNP 178

Query: 138 LHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
             K+  VKR++II ++R  + A+ +IE  TP+L A +    AR F+          Y + 
Sbjct: 179 EVKDTFVKRSKIITAIRSFLEAKGYIEVETPVLHAIAGGAAARPFITHHNALDIDMY-MR 237

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + + + L+  GFD+ ++I   FR+E   +   P EF  L++  ++ +   +++  E 
Sbjct: 238 IALELHLKRLIVGGFDKVYEIGRVFRNEGIDTRHNP-EFTLLELYEAYTDYHGMMDITEG 296

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++R                           YG  + DL  P    ++ E         F+
Sbjct: 297 LVRHCAHAVLGTGK--------------IVYGDVEIDLDKPFERLSMREAVKKYSGVDFA 342

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPV 375
           +I ++     +               D ++ +     +  L    +  D   +   + P+
Sbjct: 343 QIETLEQARAIAKEHHIEYEQRHGKGDILSLFFEEYCEKHLIQPVFITD---HPVDISPL 399

Query: 376 AKHLNIV 382
           +K     
Sbjct: 400 SKRKPEE 406



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 48/130 (36%), Gaps = 4/130 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +     EK +         P       K          +++L   G E A+     +  
Sbjct: 373 LFFEEYCEKHLIQPVFITDHPVDISPLSKRKPEEPEYTERFELFILGREHANAFSELNDP 432

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F +    K   ++           A + GMPP GG+  G+DR+VMLL  + ++R
Sbjct: 433 IDQRGRFEHQAALKAAGDDEANDIDEDFLTALEYGMPPTGGLGIGVDRLVMLLTNSASIR 492

Query: 558 EVSLFPMSQN 567
           +V LFP  + 
Sbjct: 493 DVLLFPTMKT 502


>gi|224584829|ref|YP_002638627.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|254782479|sp|C0PY12|SYK_SALPC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|224469356|gb|ACN47186.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
          Length = 505

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 74/345 (21%), Positives = 136/345 (39%), Gaps = 29/345 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L  
Sbjct: 61  LEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDL 174

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  K R++I+  +R  M+A  F+E  TP++        AR F+          
Sbjct: 175 ISNDESRNTFKTRSKILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV---- 307
             E++ R + ++      V               YG +  D   P     + E       
Sbjct: 293 LTESLFRTLAQDVLGTTQVP--------------YGDEVFDFGKPFEKLTMREAIKKYRP 338

Query: 308 HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQ 351
            ++        S     E   I   K  G  R   +  +E A + 
Sbjct: 339 ETDMADLGNFDSAKAVAESIGIHVEKSWGLGRIVTEIFDEVAEAH 383



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +         P       + ND+      +++    G EI +G    + +E   Q F
Sbjct: 381 EAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRF 440

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +   +K   ++           A + G+PP  G+  GIDR+VML   +  +R+V LFP 
Sbjct: 441 LDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPA 500

Query: 565 SQ 566
            +
Sbjct: 501 MR 502


>gi|73663548|ref|YP_302329.1| lysyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123761498|sp|Q49V26|SYK_STAS1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|72496063|dbj|BAE19384.1| lysyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 495

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 70/363 (19%), Positives = 138/363 (38%), Gaps = 26/363 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q+    D    +      S  +  I G+    
Sbjct: 61  VSIAGRLMTKRGKGKAGFAHVQDLSGQIQIYVRKDQVGEDQFAIWNSADLGDIVGV---- 116

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH- 139
             E +     TG++ + AQ   +L+ A   PLP           R++ R+LDL  +    
Sbjct: 117 --EGVMFKTNTGELSVKAQSFTLLTKALR-PLPDKFHGLQDIEQRYRQRYLDLITNQDST 173

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           +  +KR++I+  MR  +  + F+E  TP++   +   A    V       +   +  A +
Sbjct: 174 QTFIKRSKILQEMRNYLNQQGFLEVETPMMHQIAGGAAARPFVTHHNALDATLYMRIAIE 233

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI++  EN++R 
Sbjct: 234 LHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYHDIMDITENMIRH 292

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           + E+                  A   YG +  DL +     ++ +         F  I S
Sbjct: 293 ISEKVLG--------------TAKVTYGEETIDLESKWKRIHMADAVKEETGVDFFNIQS 338

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
                            N  +   +NE+   + +  L    +     G+   + P+AK  
Sbjct: 339 DEDAKIAAKEHGIEITDNMKYGHILNEFFEQKVEETLIQPTFVY---GHPIEISPLAKKN 395

Query: 380 NIV 382
              
Sbjct: 396 AED 398



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 51/133 (38%), Gaps = 11/133 (8%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   EE  I       +P  +    +      D       +++L   G E  +     
Sbjct: 366 FFEQKVEETLIQPTFVYGHPIEISP--LAKKNAEDPR--FTDRFELFIVGREHGNAFTEL 421

Query: 499 HMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +        F    + KE               A + GMPP GG+  GIDR+VMLL  + 
Sbjct: 422 NDPIDQRARFEAQLVEKEQGNDEAHEMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSA 481

Query: 555 NVREVSLFPMSQN 567
           ++R+V LFP  + 
Sbjct: 482 SIRDVLLFPYMRQ 494


>gi|217970370|ref|YP_002355604.1| lysyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217507697|gb|ACK54708.1| lysyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 513

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 60/280 (21%), Positives = 114/280 (40%), Gaps = 20/280 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            VR++G +   R  G   F+ I+D  G  Q+    D    ++    ++  +  I G V  
Sbjct: 66  EVRVAGRIMLKRIMGKASFVTIQDLSGRIQLYVQRDGVGEDVYAQFKTWDIGDIVGCV-- 123

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                      TG++ + A +I +L+ +   PLP           +++ R++DL  +   
Sbjct: 124 ----GTVFKTKTGELTVKAAEIRLLTKSLR-PLPDKFHGLTDVEQKYRQRYVDLIMNEQS 178

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
           +     R+R++ S+R  M    F+E  TP++        A+ F           + L  A
Sbjct: 179 RFTFVARSRMVQSIRNYMTGHGFLEVETPMMHPIPGGAAAKPFTTHHNALDMELF-LRIA 237

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  G ++ F++   FR+E   S R   EF  ++   ++     +++  E ++
Sbjct: 238 PELYLKRLVVGGLEKVFEVNRNFRNEGL-SPRHNPEFTMMEFYEAYANYKTLMDFTEGLI 296

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGT 288
           R    E     +          S  F R+    AIR+Y  
Sbjct: 297 RHAAREALGTESFVYQGRELDLSKPFHRLTIVQAIRKYHP 336



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 70/202 (34%), Gaps = 31/202 (15%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +  + K+      E +     +++    F     P    S         A+      
Sbjct: 325 LTIVQAIRKYHPGFTAEQLADAAWLKEKIVAFGEKVKPGGLGSLQLQLFEACAE------ 378

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              +E  +I+D+P                            + +D       +++L   G
Sbjct: 379 AELWEPTFIIDYP---------------------VEVSPLARASDTDPEITERFELFIVG 417

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGID 544
            EIA+G    +  E     F     +KE  +           RA + G+PP GG   GID
Sbjct: 418 REIANGFSELNDPEDQAARFRAQVEAKEAGDEEAMYYDADYIRALEYGLPPTGGCGIGID 477

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VMLL  A  +R+V LFP  +
Sbjct: 478 RLVMLLTDAPAIRDVILFPQMR 499


>gi|205371965|ref|ZP_03224783.1| lysyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 498

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 142/375 (37%), Gaps = 24/375 (6%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   D+             +  + V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 37  RTHLSEDIKTQYADIEKDELEEKNASVAIAGRIMTKRGKGKAGFTHIQDLTGQIQLYVRQ 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G ++  +       +  G++ +     E+L+ A   PLP 
Sbjct: 97  DAVGEEAYELFKQADL----GDLVGVAGTVFKTKV--GELSIKVTSFELLTKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASS 173
                     R++ R+LDL  +   +     R+RII SMR  + +  ++E  TP++ + +
Sbjct: 150 KYHGLKDVEQRYRQRYLDLITNQESRETFIARSRIIQSMRRYLDSNGYLEVETPMMHSIA 209

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F           + +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 210 GGASARPFTTHHNALDMPLF-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ + +DI+   EN++  + +E     TV         + A +       D
Sbjct: 268 EFTMIELYEAYADYNDIMELTENLVAHIAQEVLGTTTVPYGDY--SVELAPKWTRLHMVD 325

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
                   +  +     E R  +K   +     +           +   D++ +     G
Sbjct: 326 AVKEHTGVDFWKEMTDEEARALAKEHGIEIKDTMQYGHVVNEFFEQRVEDKLIQPTFIYG 385

Query: 353 QP-GLAYIFWRLDES 366
            P  ++ +  + DE 
Sbjct: 386 HPVEISPLAKKNDED 400



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 6/155 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E GI   +  ++  +++  F+E   E+K I      +  P       K ND    
Sbjct: 345 RALAKEHGIEIKDTMQYGHVVN-EFFEQRVEDKLIQPT-FIYGHPVEISPLAKKNDEDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L   G E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVGREHANAFTELNDPIDQRERFEAQLKEREEGNDEAHMMDDDFIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PP GG+  GIDR+VMLL  + ++R+V LFP+ ++ 
Sbjct: 463 PPTGGLGIGIDRLVMLLTNSPSIRDVLLFPLMRHR 497


>gi|206560552|ref|YP_002231317.1| lysyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|238693118|sp|B4EDB2|SYK_BURCJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|198036594|emb|CAR52491.1| lysyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 508

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 67/307 (21%), Positives = 120/307 (39%), Gaps = 30/307 (9%)

Query: 7   HSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           H   DL      S           V ++G +   R  G   F  ++D  G  Q    P+ 
Sbjct: 44  HHAADLQAKFADSDKAALEANPVEVSVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPND 103

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E   + +   +  I       +A  +      G++ +  +++ +LS A   PLP   
Sbjct: 104 VGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVQCKELRLLSKALR-PLPDKF 156

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
                + +R++ R++DL            RT+ I S+R  M   +F+E  TP+L      
Sbjct: 157 HGLSDQEMRYRQRYVDLIVTPETRDTFRARTKTIASIRKFMDNADFMEVETPMLHPIPGG 216

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF
Sbjct: 217 AAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEF 274

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRR 285
             ++   ++ +   +++  E ++R    +     T+            F R+    AI++
Sbjct: 275 TMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFHRLTITQAIQK 334

Query: 286 YGTDKPD 292
           Y  D  D
Sbjct: 335 YAPDYTD 341



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 58/337 (17%), Positives = 104/337 (30%), Gaps = 46/337 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++  D +     +L  +      G   +  F+       ++ +    P+L    ++   
Sbjct: 196 FMDNADFMEVETPMLHPI-----PGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVGG 250

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQG--QPGLAYI 359
            E          ++ +S     E   +         R   D   +  R       G A I
Sbjct: 251 FERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATI 310

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG---------DPLKFC 410
            ++  E         +   +     +      D Q  D  F              P    
Sbjct: 311 QYQGRELDLAKPFHRLT--ITQAIQKYAPDYTDGQLSDDAFLRTELKRFGVDVSQPAFLN 368

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           +     +  + +E        +E  +I+D+P                            +
Sbjct: 369 AGIGALQLALFEE--TAEAQLWEPTFIIDYP---------------------VEVSPLAR 405

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LY 526
            +D +     +++L   G EIA+G    +  E     F      K+  +           
Sbjct: 406 ASDTVPGITERFELFMTGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMFFDADYI 465

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 466 RALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|172038375|ref|YP_001804876.1| lysyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171699829|gb|ACB52810.1| lysyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 573

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 65/343 (18%), Positives = 134/343 (39%), Gaps = 35/343 (10%)

Query: 6   THSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS- 56
           TH    L           +V   V ++G +   R  G + F +++D  G  Q+  +    
Sbjct: 45  THDAATLQDKYTNLKDGEEVAVDVAIAGRIIARRVFGKLAFFNLQDETGTIQLYLDKKEI 104

Query: 57  --ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                ++  +      L   G ++             G++ +  ++ +IL+ +  LPLP 
Sbjct: 105 QAHMSDLDSAFNHLKKLTDTGDIIGVKGSIKRTE--KGELSVKVKQYQILTKSL-LPLPD 161

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRT-RIINSMRCRMIAENFIECSTPILTASS 173
                     R++ R++DL  +   +   +R   I  S+R  +  + FIE  TP+L + +
Sbjct: 162 KWHGLTDTEKRYRQRYVDLIVNPQVRQTFRRRAEITASIRRYLDKQGFIEIETPVLQSEA 221

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+      +   Y L  A + + + L+  GF++ F++   FR+E   +   P 
Sbjct: 222 GGAEARPFITYHNTLEMDLY-LRIATELHLKRLIVGGFEKVFELGRIFRNEGVSTKHNP- 279

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ + +D++   E ++    EE           L+I        Y  +  D
Sbjct: 280 EFTSIEVYQAYADYNDMMELTEAIITTAAEEVLG-------TLKIT-------YQGEDID 325

Query: 293 LRNP---IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
           L  P   + MH++ +     +F  F    +     +   +   
Sbjct: 326 LSTPWRRVTMHDIVKEKSGLDFEQFKDFETAKNAVKEVGLDVP 368



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 58/167 (34%), Gaps = 27/167 (16%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
           D  + C       N + ++   +     +  +I+DFP      E   +   H        
Sbjct: 366 DVPETCQSLGKLINEVFEQ--TVEETLIQPTFILDFPV-----EISPLAKPHR------- 411

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVEN 520
                           +++L   G E+A+                     K        +
Sbjct: 412 ---------NKEGLVERFELYIVGRELANSFSELTDPIDQRNRLEKQAEQKAAGDLEAHS 462

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                  A + GMPP GG+  GIDR++MLL  + ++R+V  FP+ +N
Sbjct: 463 VDEDFLTALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIAFPLLKN 509


>gi|76664737|emb|CAJ17808.1| aspartyl-tRNA synthetase [Candidatus Phytoplasma solani]
          Length = 225

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 94/227 (41%), Positives = 142/227 (62%), Gaps = 2/227 (0%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M    +    +L + + G  V L G++ R R  G  +FLD+RD  GI Q++       ++
Sbjct: 1   MQNKHSRYNNELTLQNKGEAVFLKGFLFRKRNLGKTLFLDLRDVSGIIQLLIKETHPQYQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              +++ E V+ I GLV+ RS +  N  + T +IE+    + +L+ A+ LPL VF  ++ 
Sbjct: 61  QIIALKLETVVEIKGLVVERSNK--NTKLKTSEIEILVSYLNVLNEAQTLPLNVFRSQDS 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E  R KYR+LDLR   +   +++R  I  S+R  ++  +F+E  TPIL+ S+PEGARD+
Sbjct: 119 LEETRLKYRYLDLRNPDIKYFLIQRHHITQSIRQTLLKNDFLELETPILSKSTPEGARDY 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           LVPSR+  G+FYALPQ+PQ +KQL M +GF+RYFQ+A CFRDED R+
Sbjct: 179 LVPSRIYPGNFYALPQSPQLFKQLYMIAGFERYFQVARCFRDEDLRA 225


>gi|240949401|ref|ZP_04753742.1| lysyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240296150|gb|EER46806.1| lysyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 501

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 73/307 (23%), Positives = 132/307 (42%), Gaps = 28/307 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L   D+   V+++G +   R  G   F  I+D  G  Q+    D+    +     S W L
Sbjct: 57  LKEQDI--QVKVAGRIMLKRVMGKASFFTIQDVSGQIQLYVARDNLAEGVYSDKVSLWDL 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++  S         TG++ +   ++E+L+ +   PLP   +    + IR++ R+L
Sbjct: 115 ---GDIVGVSGTLF--KTKTGELTVRCSEVELLTKSLR-PLPNKVQGITDQEIRYRQRYL 168

Query: 132 DLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +    +  + R+++++ +R   +   FIE  TP+L        AR F+        
Sbjct: 169 DLISNEESRRTFMIRSQVVSGIRQFFLERGFIEVETPMLQVIPGGAAARPFVTHHNALDV 228

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +  D+
Sbjct: 229 DMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMIEYYQAYADYHDL 286

Query: 250 LNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           ++  E +LR +  +      V            F RI   +AI +YG       N I M 
Sbjct: 287 MDNTEELLRKLALDILGTTDVPYGEYVFDFGKPFERITMHEAIVKYG-------NGISME 339

Query: 301 NVTEHFV 307
           ++ +   
Sbjct: 340 DLHDFDK 346



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 67/196 (34%), Gaps = 18/196 (9%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
                    +   +             D  K  + A      I +  G+ +        I
Sbjct: 316 FGKPFERITMHEAIVKYGNGISMEDLHDFDKAVAIAKGLHIEIQKSWGLGS--------I 367

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGG 495
           ++   +E   E + I      F M      S     ND       +++L   G EI +G 
Sbjct: 368 VNA-IFEEVAEHQLIQPT---FLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGF 423

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLL 551
              + +E   + F     +K+  ++           A + G+PP  G   GIDR+ M+  
Sbjct: 424 SELNDAEDQAERFDAQVAAKDAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMIFA 483

Query: 552 GAKNVREVSLFPMSQN 567
            A ++R+V LFP  + 
Sbjct: 484 NAPSIRDVILFPAMRQ 499


>gi|228476210|ref|ZP_04060913.1| lysine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228269695|gb|EEK11194.1| lysine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 496

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 66/373 (17%), Positives = 143/373 (38%), Gaps = 25/373 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   +  S V ++G +   R  G   F  ++D  G  Q+    D    E   ++   W 
Sbjct: 51  ELHEKEDESHVSIAGRLMTKRGKGKAGFAHVQDLTGQIQIYVRKDQIDEEPFDNL---WK 107

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               G ++    E +     TG++ + A+   +LS A   PLP           R++ R+
Sbjct: 108 TTDLGDIVGI--EGVMFKTNTGELSVKAKSFTLLSKALR-PLPDKFHGLQDIEQRYRQRY 164

Query: 131 LDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDL  +    +  + R++II  MR  +    ++E  TP++   +   A    V       
Sbjct: 165 LDLITNQDSTRTFINRSKIIQEMRNYLNQRGYLEVETPMMHQIAGGAAARPFVTHHNALD 224

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI
Sbjct: 225 ATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYHDI 283

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++  E+++R + +                   A  +Y  ++ DL +     ++ +    +
Sbjct: 284 MDLTESMVRHIAQTVLG--------------SAKVQYNGEEIDLESDWKRLHIVDAVKEA 329

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
               F  + +      +          N  +   +NE+   + +  L    +     G+ 
Sbjct: 330 TGVNFYNVKTDEEAKALAKAHGIEITENMKYGHILNEFFEQKVEETLIQPTFIY---GHP 386

Query: 370 AGMGPVAKHLNIV 382
             + P+AK     
Sbjct: 387 IEISPLAKKNPED 399



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F       +  L   +    +   +++L   G E A+     +
Sbjct: 367 FFEQKVEETLIQPT---FIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELN 423

Query: 500 MSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F    + KE               A + GMPP GG+  GIDR+VMLL  + +
Sbjct: 424 DPIDQRERFEAQLVEKEQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPS 483

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  + 
Sbjct: 484 IRDVLLFPYMRQ 495


>gi|189423826|ref|YP_001951003.1| lysyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189420085|gb|ACD94483.1| lysyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 492

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 69/277 (24%), Positives = 119/277 (42%), Gaps = 20/277 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            L+G +   R  G   F+ ++D  G  QV    D    E+     S  +  I G+V    
Sbjct: 57  VLAGRIIARRSFGKAAFMQLQDRKGRIQVYVRKDDLGEEVFAQFESFDIGDIIGIV---- 112

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                    TG++ + A+ I +L  +  LPLP           R++ R++DL  +   + 
Sbjct: 113 --GFPFRTKTGELSVHARSIRLLVKSL-LPLPEKFHGLTDVETRYRQRYVDLIVNPEVRE 169

Query: 142 -IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             +KR+RI+N +R  M + +F+E  TP++        AR F+          Y L  AP+
Sbjct: 170 LFIKRSRIVNLIRSFMTSRDFLEVETPMMHQIPGGATARPFVTHHNALDMELY-LRIAPE 228

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++   +D+++  E +   
Sbjct: 229 LYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYQAYATFEDLMDFTEELFCH 287

Query: 260 VFEEFSNG---------NTVSNNFLRICYDDAIRRYG 287
           V E+              +    + R+   +AI  YG
Sbjct: 288 VAEQVLGTLGFSYQGLAISFQRPWRRLTVKEAILEYG 324



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 7/130 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           +E   E K I       T     +  L + NDL      +++L+  G EIA+     +  
Sbjct: 362 FEEVAEHKLIQPTF--VTAYPTEVSPLSRKNDLDPYIVDRFELMIGGREIANAFSELNDP 419

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      K+  +           RA + G+PP  G   GIDR+VMLL  + ++R
Sbjct: 420 VDQKERFLAQVAEKDKGDEEAHYMDEDYVRALEYGLPPTAGEGIGIDRLVMLLTDSASIR 479

Query: 558 EVSLFPMSQN 567
           +V LFP  + 
Sbjct: 480 DVILFPQLRK 489


>gi|146312949|ref|YP_001178023.1| lysyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166980067|sp|A4WE42|SYK_ENT38 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|145319825|gb|ABP61972.1| lysyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 505

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 76/364 (20%), Positives = 137/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+  + 
Sbjct: 42  RDHTSDQLHADFDAKENEELEALNVEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     I      +W L   G ++    +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGIYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL  +   +     R++I+  +R  M+  +F+E  TP++    
Sbjct: 156 KFHGLQDQEARYRQRYLDLISNDESRKTFKIRSQIMAGIRQFMVGRDFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFVTHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +       V               YG +  D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQNILGTTEVP--------------YGDEVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEW 347
              P +   + E        +E        S     E   I   K  G  R   +   E 
Sbjct: 320 FGKPFVKLTMREAIKKYRPETEMADLDNYDSAKAIAESIGIKVEKSWGQGRIVTEIFEEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 5/128 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E   +         P       + ND       +++    G EI +G    + ++
Sbjct: 376 FEEVAEA-HLIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSELNDAQ 434

Query: 503 VMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              Q F +   +K   ++           A + G+PP  G+  GIDR+VML   +  +R+
Sbjct: 435 DQAQRFQDQVDAKAAGDDEAMFFDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRD 494

Query: 559 VSLFPMSQ 566
           V LFP  +
Sbjct: 495 VILFPAMR 502


>gi|218549238|ref|YP_002383029.1| lysyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|218356779|emb|CAQ89407.1| lysine tRNA synthetase, inducible [Escherichia fergusonii ATCC
           35469]
 gi|324114245|gb|EGC08218.1| lysyl-tRNA synthetase [Escherichia fergusonii B253]
 gi|325497656|gb|EGC95515.1| lysyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 505

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 74/345 (21%), Positives = 137/345 (39%), Gaps = 29/345 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G +   R  G   F+ ++D  G  Q+    DS    +      +W L  
Sbjct: 61  LESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++            TG++ +   ++ +L+ A   PLP        + +R++ R+LDL
Sbjct: 119 -GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPDKFHGLQDQEVRYRQRYLDL 174

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              D   +  V R++I+ ++R  M+A  F+E  TP++        AR F+          
Sbjct: 175 IANDKSRQTFVVRSKILAAIRKFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIE 292

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV---- 307
             E++ R + ++      V+              YG    D   P     + E       
Sbjct: 293 LTESLFRTLAQDVLGTTKVT--------------YGEHVFDFGKPFEKLTMREAIKKYRP 338

Query: 308 HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEWARSQ 351
            ++        +     E   I   K  G  R   +  +E A + 
Sbjct: 339 ETDMADLDDFDAAKALAESIGITVEKSWGLGRIVTEIFDEVAEAH 383



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 67/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D       D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDDF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 426 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|238792835|ref|ZP_04636466.1| Lysyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238727943|gb|EEQ19466.1| Lysyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 507

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 75/357 (21%), Positives = 143/357 (40%), Gaps = 35/357 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y +    +L   ++   V ++G +   R  G   F+ ++D  G  Q+  + D     I  
Sbjct: 55  YGSKENEELEALNI--EVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGIYN 112

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++    +       TG++ +   ++ +L+ A   PLP        + 
Sbjct: 113 EEFKKWDL---GDILGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQE 166

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL  +   ++  K R+++++ +R  M+ + F+E  TP++        AR F+
Sbjct: 167 TRYRQRYLDLIANDESRHTFKVRSQVMSGIRSFMVEKGFMEVETPMMQVIPGGASARPFV 226

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M
Sbjct: 227 THHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYM 284

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E + R + E                   ++ +YG    D   P     
Sbjct: 285 AYADYKDLIVLTEELFRTLTETVLG--------------SSVVQYGEQTFDFGKPFAKLT 330

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351
           + E          + +  ++   +  AI         K  G  R  C+   E A S 
Sbjct: 331 MKEAICKYRPE--TNVADLDDMDKALAIAESLGIKVEKSWGLGRVQCEIFEETAESH 385



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 70/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P AK          R   ++ D D       D     + +   +   +  LG + C  FE
Sbjct: 325 PFAKLTMKEAICKYRPETNVADLDDM-----DKALAIAESLGIKVEKSWGLGRVQCEIFE 379

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND       +++    G EI +
Sbjct: 380 ------------ETAESHLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGN 427

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F++   +KE  ++           A + G+PP  G+  GIDR+VML
Sbjct: 428 GFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 487

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 488 FTNSHTIRDVILFPAMR 504


>gi|193084144|gb|ACF09810.1| aspartyl-tRNA synthetase [uncultured marine group III euryarchaeote
           SAT1000-53-B3]
          Length = 427

 Score =  209 bits (532), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 92/360 (25%), Positives = 152/360 (42%), Gaps = 28/360 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            + T  CG++  SD GS   L GW+   R  GGI FL +RD  G+ Q+         E  
Sbjct: 1   MFYTRKCGEIEESDFGSEQTLCGWLQDTRNLGGIAFLQLRDITGVIQLTLLKKKLGDENF 60

Query: 63  KS---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGER 118
           KS   +  E ++ + G+V              G +E+    IE+++ AE      V  + 
Sbjct: 61  KSWANINRESIILVRGIVKENKE-------APGGVEMLPDNIELVNEAETPLPLGVIDKI 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +     R   R+LDLR+  +  N   R  I  ++   +  ENF+E  TP + AS+ EG  
Sbjct: 114 DSEIETRLNARYLDLRKTEIVANFQIRAAISGAVHKHLRRENFLEVQTPKIIASATEGGT 173

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                   ++ ++ A  Q+PQ YKQ+LM+ G +R +++ P FR E+  + R   EF  +D
Sbjct: 174 SLFEMKYFDKTAYLA--QSPQLYKQILMSGGLERVYEVGPAFRAEEHNTPRHLNEFISID 231

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTV-----------SNNFLRICYDDAIRRYG 287
           +EMSF + D ++  ME ++       S                     RI YD+A+    
Sbjct: 232 IEMSFADDDVVMGVMERLVATAARSVSKETKALKALGIEPIDLELPLPRITYDEAVEMAQ 291

Query: 288 TDKPDLRN-PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                  +  +         ++  + +    LS+ P Y     P +    ++ F    NE
Sbjct: 292 GKVKWGEDLSMEATRTIAEQMNGFYFITKWPLSLKPFYIQ---PDEDPKYSKGFDFMYNE 348



 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 71/195 (36%), Gaps = 32/195 (16%)

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K L I   +       +   ++     G        + +A   IA+++         F +
Sbjct: 265 KALGIEPIDLELPLPRITYDEAVEMAQGKVKWGEDLSMEATRTIAEQMN-------GFYF 317

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I  +P             +  PF +                 +  +D + N  E+ SGG 
Sbjct: 318 ITKWPL------------SLKPFYIQPDEDPKY---------SKGFDFMYNEVEMTSGGQ 356

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H   ++ +     G+      + F      F+ GMPPH G   G+DR+ M+  GAKNV
Sbjct: 357 RVHDVNLLRERLKEQGLDP----DGFNHYLDPFRYGMPPHAGWGLGLDRLAMIFAGAKNV 412

Query: 557 REVSLFPMSQNFCDL 571
           RE  LFP  +N    
Sbjct: 413 RECVLFPRDRNRMTP 427


>gi|222528674|ref|YP_002572556.1| lysyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455521|gb|ACM59783.1| lysyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 497

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 72/322 (22%), Positives = 136/322 (42%), Gaps = 24/322 (7%)

Query: 6   THSCGDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   D+  +     G FV ++G +   R HG   F+DI D  G  Q+    D    E  
Sbjct: 43  THYSTDIKENFEVFEGKFVCVAGRMLSKRGHGKASFVDILDTKGKIQIYIKIDEVGEEKY 102

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  +  + +   G ++    E        G+I + A++IE+L+     PLP         
Sbjct: 103 EEFKEYYDI---GDIIGVKGEVF--KTHKGEISVKAKEIEMLTKCLR-PLPEKWHGLKDV 156

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL  +   ++  +KR+ II S+R  +    F+E  TP+L+  +    AR F
Sbjct: 157 DTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFLDDRGFLEVETPVLSPVAGGAAARPF 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + + + L+  GFD+ +++   FR+E       P EF  +++ 
Sbjct: 217 ITHHNALDIDLY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIY 274

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKP 291
            ++ +  D+++  E ++  V +E      ++           + R+   +AI++Y     
Sbjct: 275 QAYADYKDMMDLTEKLITTVAQEVLGTLKITYQGQEIDLTAPWQRLTMVEAIKKY--VGV 332

Query: 292 DLRNPIIMHNVTEHFVHSEFRV 313
           D  N   +    +        V
Sbjct: 333 DFENVTSLDEARKIAKDLGIEV 354



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 7/161 (4%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
            +   +AR  IA++LGI     ++   I++   +E   E+  +          +    + 
Sbjct: 337 VTSLDEAR-KIAKDLGIEVEENWQIGHIIN-EIFEKKVEDFLVQPTFIMDYPVEVSPLAK 394

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
           +  D       +++L     EIA+     +      + F      ++             
Sbjct: 395 RKKDNPQF-TERFELFITCREIANAFSELNDPFDQKERFLEQLKERQRGNQEAHMMDEDF 453

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+VMLL  + ++R+V LFP  +
Sbjct: 454 IEALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFPTMR 494


>gi|212223489|ref|YP_002306725.1| aspartyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212008446|gb|ACJ15828.1| aspartyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 443

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 155/368 (42%), Gaps = 30/368 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +  YRTH    +     G  V+++GWV  V+  GGI FL IRD  GI Q+ A       E
Sbjct: 4   VEMYRTHYSSQITEDLNGQRVKVAGWVWEVKDLGGIKFLWIRDREGIVQITAPKKKVDPE 63

Query: 61  IAK---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFG 116
           I K    + SE V+ ++G+V                 E+  +K+E+LS A+        G
Sbjct: 64  IFKLIPKLNSEDVIAVEGIVNFTPK-------AKLGFEILPEKLEVLSRAQTPLPLDPTG 116

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           + +     R   RF+D+R+  +      R+ +  ++      E FIE  TP + A++ EG
Sbjct: 117 KVKAELDTRLDNRFMDVRKPEVTAIFKIRSSVFKAVHDFFHGEGFIEVHTPKIIATATEG 176

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +        + +F A  Q+PQ YKQ++MASG DR +++AP FR E+  + R   E + 
Sbjct: 177 GTELFPMKYFEKDAFLA--QSPQLYKQIMMASGLDRVYEVAPIFRAEEHNTTRHLNEAWS 234

Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAI 283
           +D EM+F+E  ++++  +E ++          N                 F R+ YD A+
Sbjct: 235 IDAEMAFIENEEEVMELLERLIAYTINHVREHNEKELETLNFELEEPKLPFPRLAYDKAL 294

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
                   ++     +    E  +              P Y ++  P++         D 
Sbjct: 295 EILADLGKEIPWGEDIDTEGERLLGKYMMENENA----PLYFLYRYPSEAKPFYIMKYDD 350

Query: 344 MNEWARSQ 351
             E  R+ 
Sbjct: 351 KPEICRAF 358



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +      PF + +   +          +A  +DL   G EI SGG R H  +V+++    
Sbjct: 335 RYPSEAKPFYIMKYDDK------PEICRA--FDLEYRGVEITSGGQREHRVDVLVEQIKE 386

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G++       F    +AF+ GMPPHGG   G +R++  +L   N+REV LFP  +    
Sbjct: 387 KGLNP----ESFEFYLKAFRYGMPPHGGFGLGAERLLKQMLNLNNIREVVLFPRDRRRLT 442

Query: 571 L 571
            
Sbjct: 443 P 443


>gi|314937276|ref|ZP_07844618.1| lysine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654572|gb|EFS18322.1| lysine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 496

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 66/373 (17%), Positives = 143/373 (38%), Gaps = 25/373 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   +  S V ++G +   R  G   F  ++D  G  Q+    D    E   ++   W 
Sbjct: 51  ELHEKEDESHVSIAGRLMTKRGKGKAGFAHVQDLTGQIQIYVRKDQIGEEPFDNL---WK 107

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               G ++    E +     TG++ + A+   +LS A   PLP           R++ R+
Sbjct: 108 TTDLGDIVGI--EGVMFKTNTGELSVKAKSFTLLSKALR-PLPDKFHGLQDIEQRYRQRY 164

Query: 131 LDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDL  +    +  + R++II  MR  +    ++E  TP++   +   A    V       
Sbjct: 165 LDLITNQDSTRTFINRSKIIQEMRNYLNQRGYLEVETPMMHQIAGGAAARPFVTHHNALD 224

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI
Sbjct: 225 ATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYHDI 283

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++  E+++R + +                   A  +Y  ++ DL +     ++ +    +
Sbjct: 284 MDLTESMVRYIAQTVLG--------------SAKVQYNGEEIDLESDWKRLHIVDAVKEA 329

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
               F  + +      +          N  +   +NE+   + +  L    +     G+ 
Sbjct: 330 TGVNFYNVKTDEEAKALAKAHGIEITENMRYGHILNEFFEQKVEETLIQPTFIY---GHP 386

Query: 370 AGMGPVAKHLNIV 382
             + P+AK     
Sbjct: 387 IEISPLAKKNPED 399



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F       +  L   +    +   +++L   G E A+     +
Sbjct: 367 FFEQKVEETLIQPT---FIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELN 423

Query: 500 MSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F    + KE               A + GMPP GG+  GIDR+VMLL  + +
Sbjct: 424 DPIDQRERFEAQLVEKEQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPS 483

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  + 
Sbjct: 484 IRDVLLFPYMRQ 495


>gi|195953371|ref|YP_002121661.1| lysyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932983|gb|ACG57683.1| lysyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 569

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 96/573 (16%), Positives = 179/573 (31%), Gaps = 130/573 (22%)

Query: 6   THSCGDLGVSDVG----SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           T S  D+            + ++G +  +R  G  IF  I+D  G  Q+    D    E 
Sbjct: 114 TTSIDDIKKEHDLDPNFEDISIAGRLVALRSMGKAIFGHIQDFTGKLQIYIKKDIVGDEK 173

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K V         G ++    +       TG++ +    IE+L+ A    +P        
Sbjct: 174 FKFVEDY---IDVGDIIGIKGKLF--RTHTGELTVEVFDIELLTKAL-NNMPEKWHGIKD 227

Query: 122 ESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
             I+++ R+LDL  +   + +   R++II ++R       F+E  TPIL   +    AR 
Sbjct: 228 IEIKYRQRYLDLIANESSRKVFTLRSKIIKALRDFFDKNKFMEVETPILQPIASGATARP 287

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+      +   Y L  AP+ Y + L+  G  R ++                        
Sbjct: 288 FVTYHNYLESELY-LRIAPELYLKKLIVGGIPRVYE------------------------ 322

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
                               + + F N    + +       +    Y   K  ++    +
Sbjct: 323 --------------------IGKNFRNEGVDTTHNPEFTMVEFYAAYWDYKKLIKFTEEL 362

Query: 300 HN-VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
            + +T+          + ++++ P + V             F + + E            
Sbjct: 363 FDYLTDITGIKSIETQNGVINLKPPFRVA-----------KFFELLEE------------ 399

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                D+S  +     + K  N +           +  +  F                  
Sbjct: 400 -KTSKDKSFFLHHEEELKKFANELGIPKAYTLTKPKLIEKVFEYT--------------- 443

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
                   +     +  +I+DFP               +P        + L         
Sbjct: 444 --------VEDELIQPTFIIDFP------------KMLSPLAKTHRDDDEL--------- 474

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++L  N  EIA+     +  E   + F    + K   +            A + GMP
Sbjct: 475 VERFELYINKKEIANAYSELNDPEDQAKRFLEQKLQKATGDEEAMETDDDFVEALRYGMP 534

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           P  G   GIDR+VML     ++R+V LFP ++ 
Sbjct: 535 PTAGEGIGIDRLVMLFANVDSIRDVILFPANRK 567


>gi|30250282|ref|NP_842352.1| lysS; putative lysyl-tRNA synthetase protein [Nitrosomonas europaea
           ATCC 19718]
 gi|39932150|sp|Q82SH1|SYK_NITEU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|30181077|emb|CAD86267.1| lysS; putative lysyl-tRNA synthetase protein [Nitrosomonas europaea
           ATCC 19718]
          Length = 502

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 68/302 (22%), Positives = 133/302 (44%), Gaps = 22/302 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y + S  +L  S V   V+++G +   R  G   F  I+D  G  Q+  + D      
Sbjct: 49  EKYDSCSREELESSQV--TVKVAGRMLFKRVMGKASFATIQDMSGRIQLYISNDHTGETA 106

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            ++ R   +  I G      AE +     T ++ L   ++ +L+ +   PLP        
Sbjct: 107 HEAFRHYDLGDILG------AEGVLFKTRTDELSLRVTQLHLLTKSLR-PLPEKFHGLAD 159

Query: 122 ESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  +++ R+LDL  +   + +   R++II ++R  ++  +++E  TP++ +      AR 
Sbjct: 160 QEQKYRRRYLDLITNEDTRRVFAIRSKIIQAIREFLVDRDYLEVETPMMHSIPGGATARP 219

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+        S Y L  AP+ Y + L+  G ++ F+I   FR+E   +   P EF  L+ 
Sbjct: 220 FVTHHNALDMSLY-LRIAPELYLKRLVVGGMEKVFEINRNFRNEGISTRHNP-EFTMLEF 277

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDK 290
             ++ + + +++  E++LR V  + S    +            F R+    AI +Y  + 
Sbjct: 278 YEAYQDHNYLMDLTESMLREVALKVSGTTRIVYQQREMDLAQPFARLTIAQAILKYHPEY 337

Query: 291 PD 292
            D
Sbjct: 338 SD 339



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 59/155 (38%), Gaps = 29/155 (18%)

Query: 421 AQELGIINCNC----FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             +L + +       FE  +I+D+P               +P          +       
Sbjct: 367 GLQLALFDETTEHLLFEPVFIVDYP------------AEVSPLARCNDANPEITD----- 409

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCG 532
               +++L   G EIA+G    +  E     F     +KE       +      +A + G
Sbjct: 410 ----RFELYIAGREIANGFSELNDPEDQANRFLEQARAKEAGDLEAMHYDADYIQALEYG 465

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +PP  G   GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 466 LPPTAGEGIGIDRLVMLLTDSPSIRDVILFPQLRK 500


>gi|312128201|ref|YP_003993075.1| lysyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778220|gb|ADQ07706.1| lysyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 497

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 73/322 (22%), Positives = 136/322 (42%), Gaps = 24/322 (7%)

Query: 6   THSCGDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   D+  +     G FV ++G +   R HG   F+DI D  G  Q+    D    E  
Sbjct: 43  THYSADIKENFEVFEGKFVCVAGRMLSKRGHGKASFVDILDTKGKIQIYIKIDEVGEEKY 102

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  +  + +   G ++    E        G+I + A++IE+L+     PLP         
Sbjct: 103 EEFKEYYDI---GDIIGVKGEVF--KTHKGEISVKAKEIEMLTKCLR-PLPEKWHGLRDI 156

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL  +   ++  +KR+ II S+R  +    F+E  TP+L+  +    AR F
Sbjct: 157 DTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFLDDRGFLEVETPVLSPVAGGAAARPF 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + + + L+  GFD+ +++   FR+E       P EF  +++ 
Sbjct: 217 ITHHNALDIDLY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIY 274

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKP 291
            ++ +  D++N  E ++  V +E      ++           + R+   +AI++Y     
Sbjct: 275 QAYADYKDMMNLTEELITTVAKEVLGTLKITYQGQEIDLTPPWQRLTMVEAIKKY--VGV 332

Query: 292 DLRNPIIMHNVTEHFVHSEFRV 313
           D  N   +    +        V
Sbjct: 333 DFENVNSIDEARKIAKDLGIEV 354



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 6/153 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IA++LGI     ++   I++   +E   E+  +          +    + +  D    
Sbjct: 344 RKIAKDLGIEVEENWQVGHIIN-EIFEKKVEDFLVQPTFIMDYPVEVSPLAKRKKDNPQF 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
              +++L     E+A+     +      + F      ++               A + GM
Sbjct: 403 -TERFELFITCRELANAFSELNDPFDQKERFLEQLKERQRGNQEAHMMDEDFIEALEYGM 461

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG+  GIDR+VMLL  + ++R+V LFP  +
Sbjct: 462 PPTGGLGIGIDRLVMLLTDSYSIRDVLLFPTMR 494


>gi|218437352|ref|YP_002375681.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218170080|gb|ACK68813.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 573

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 67/360 (18%), Positives = 135/360 (37%), Gaps = 35/360 (9%)

Query: 6   THSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-- 55
           TH   +L           ++   V ++G +   R  G + F +++D  G  Q+       
Sbjct: 45  THHAAELQEKYADLENGEEIDLEVSIAGRIIARRVFGKLAFFNLQDETGTIQLYLEKKRI 104

Query: 56  -SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                ++A +  +   L   G ++             G++ +   +  IL+    LPLP 
Sbjct: 105 SQTMADVANAFNTVLKLTDTGDILGAKGTIKRTE--KGELSIYVTEYAILTKTL-LPLPD 161

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                     R++ R++DL     + +   +R +I  S+R  +  E F+E  TP+L + +
Sbjct: 162 KFHGLTDIEKRYRQRYVDLIINPEVRETFRRRAQITASIRRYLEQEGFLEIETPVLQSEA 221

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+      +   Y L  A + + + L+  GF++ F++   FR+E   +   P 
Sbjct: 222 GGADARPFITYHNTLEMDLY-LRIATELHLKRLIVGGFEKVFEMGRIFRNEGVSTRHNP- 279

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  D++   EN++    ++      ++     I      RR       
Sbjct: 280 EFTSIEIYQAYADYHDMMVLTENIITTAAKDVVGTLKITYQEEEIDLTPPWRR------- 332

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK------GGGGNRAFCDRMNE 346
               + MH + E     +   F          +   I         G   N AF  ++ E
Sbjct: 333 ----VTMHELVEEKTGLDLNKFKTFEEARTAAKKAGIDVPEDCKTLGKLLNEAFEQKVEE 388



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 66/218 (30%), Gaps = 40/218 (18%)

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +    + E         + K            +  +           D  + C       
Sbjct: 330 WRRVTMHELVEEKTGLDLNKFKTFEEARTAAKKAGI-----------DVPEDCKTLGKLL 378

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           N   ++   +  +  +  +++DFP      E   +   H                   S 
Sbjct: 379 NEAFEQ--KVEESLIQPTFVLDFPV-----EISPLAKPHR----------------SKSG 415

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
              +++L   G E+A+            +        K                A + GM
Sbjct: 416 LVERFELYIVGRELANSFSELTDPIDQRKRLEAQAEKKAAGDLEAHGVDEDFLTALEYGM 475

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP--MSQNFC 569
           PP GG+  GIDR++MLL  + ++R+V  FP   SQ+  
Sbjct: 476 PPTGGLGIGIDRLIMLLTNSPSIRDVIAFPLLKSQSAA 513


>gi|258544155|ref|ZP_05704389.1| lysine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520597|gb|EEV89456.1| lysine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 497

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 70/312 (22%), Positives = 131/312 (41%), Gaps = 31/312 (9%)

Query: 2   HRYRTHSCGDL-----GVSDVGS-----FVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQV 50
           H   TH    L     G+ D         +R++G +   R  G   F  I+D  G   Q+
Sbjct: 32  HARPTHKAAALHAAYHGIEDADQLLAAGEIRVAGRMMSKRVMGKASFTAIQDGSGARMQI 91

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
             + D          ++  V    G ++S   +       TG++ + A  +E+L+ +   
Sbjct: 92  YLSRDELPEGRYADFKTWDV----GDIISARGKLF--RTQTGELTIHADDVELLTKSLR- 144

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP        +  R++ R++DL  +   +N  + R++I++ +R    A +F+E  TP++
Sbjct: 145 PLPEKYHGLSDQETRYRQRYVDLITNEDSRNTFIIRSKIVSYIRRFFEARDFLEVETPMM 204

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   A+ F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   + 
Sbjct: 205 HPIPGGATAKPFITHHNALDMPLY-LRIAPELYLKRLVVGGFERVFEINRSFRNEGVSTR 263

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICY 279
             P EF  L+   ++ +  D+++  E + +G+  E      ++           F R+  
Sbjct: 264 HNP-EFTMLEYYQAYADYHDLMDQTEELFQGLAREVLGSPQITYQGVAIDLGQPFARLTM 322

Query: 280 DDAIRRYGTDKP 291
            DAIR++     
Sbjct: 323 LDAIRQHAPQHA 334



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 4/99 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN----VGISKEVVENRFGGLYR 527
           ND       +++L   G E+A+G    + +E   + F           +   +      R
Sbjct: 397 NDDTPDICDRFELFIGGREVANGFSELNDAEDQAERFRAQAAAFDAGDDEAMHYDADYIR 456

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + GMPP  G   GIDR+VMLL  A ++R+V LFP  +
Sbjct: 457 ALEYGMPPTAGEGIGIDRLVMLLTDAPSIRDVLLFPHMR 495


>gi|13540308|gb|AAK29404.1|AF337055_1 lysyl tRNA synthetase [Methanosarcina barkeri]
          Length = 516

 Score =  209 bits (531), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 101/559 (18%), Positives = 188/559 (33%), Gaps = 121/559 (21%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             + G  VR +G ++ +R  G +IF D+ D  G  Q+     +   E  K+ ++   L  
Sbjct: 72  EKNEGLTVRTAGRLYNIRRLGKMIFADLGDQGGRIQITLRKGNLPDEDFKTFKT---LVD 128

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++             G+  +S  +  +LS +    LP           R++ R+LDL
Sbjct: 129 SGDIVGVQGTLFRTK--RGENSISVSEFSLLSKSL-CALPEKFHGLKDVETRYRKRYLDL 185

Query: 134 RRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   +   V R+++I+ +R  +    F+E  TPIL                   G   
Sbjct: 186 IVNADKREIFVMRSKLISEIRRYLSDREFLEFETPILHNVYGGANARPFTTFHNCLGQNS 245

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           +L  AP+ Y + L+  G+++ F+I   FR                         ++ ++T
Sbjct: 246 SLRIAPELYLKRLVVGGYEKVFEITKNFR-------------------------NEDIDT 280

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
             N                  F  I   +A R Y     DL   +I   + +     E +
Sbjct: 281 THN----------------PEFTTIEVYEAYRDYNDMM-DLTEGLISELMFKLTGSYEVK 323

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
           +    L+++  ++  ++            D + E+A                  G     
Sbjct: 324 IGENTLNLSTPWKRISME-----------DALKEYA------------------GLDVFA 354

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
             +         + I +   ++D             +  F A          G++     
Sbjct: 355 HSL------EELKQIAIENKIED-------YEKANTYGEFLALLFE------GLVEDKLI 395

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              +I D+P        +    A NP    +G +                    NG+E+A
Sbjct: 396 NPTFIYDYPV-------ENSPLAKNPTGQKKGLLRDSSY-------------FMNGWELA 435

Query: 493 SGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G    +      + F      ++      +        A   GMPP GG+  GIDR+ M
Sbjct: 436 NGYSELNDPIEQKKRFEEQDKKRKLGDLEAQTIDYDFVNALGYGMPPTGGMGLGIDRLTM 495

Query: 549 LLLGAKNVREVSLFPMSQN 567
           +L+G  +++EV LFP  + 
Sbjct: 496 ILVGLDSIKEVILFPQMKR 514


>gi|126701178|ref|YP_001090075.1| lysyl-tRNA synthetase [Clostridium difficile 630]
 gi|115252615|emb|CAJ70458.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Clostridium
           difficile]
          Length = 509

 Score =  209 bits (531), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 74/350 (21%), Positives = 137/350 (39%), Gaps = 26/350 (7%)

Query: 3   RY-RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           RY RTH   D+     S  G   +++G +   R  G   F+DI+D  G  Q     D+  
Sbjct: 43  RYDRTHYSMDIKDNFDSLEGKTTKIAGRIMSKRIQGKAGFIDIQDQEGRIQSYVRLDAIG 102

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E      +  +  I G+      E        G+I + A+ + +L  + +  LP     
Sbjct: 103 EEEYSVFSTYDIGDIVGI------EGEIFKTKKGEISVKAKSVVLLCKSLQ-VLPEKYHG 155

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + +R++ R++DL  +   KN    RT+ + ++R  +    F+E  TPIL T +    
Sbjct: 156 LKDQELRYRQRYVDLIVNPEVKNAFLIRTKALKALRAYLDDRGFLEVETPILNTIAGGAN 215

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + Y + L+  GFD+ +++   FR+E       P E+  
Sbjct: 216 ARPFITNHNTLHIPMY-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDLKHNP-EYTA 273

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +++  ++ +  D++   ENV+  + E  +    V+     I +    +R           
Sbjct: 274 IELYQAYADYTDMMEITENVIAHMAEVATGSMIVNYQGTEINFTPPWKR----------- 322

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           + M +  + +   +F   +             I  K G       +   E
Sbjct: 323 MSMEDCVKEYSGVDFSTINTDEEALEVAREKGIEIKPGMRRGEVINAFFE 372



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 12/156 (7%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---HNPFTMPQGGMESLKGNDL 474
             +A+E GI          +++  F+E   E+K I      H+P  +      ++   D 
Sbjct: 347 LEVAREKGIEIKPGMRRGEVINA-FFEEFGEDKLIQPTFITHHPVEVSPLSKRNV--EDP 403

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVML----QAFSNVGISKEVVENRFGGLYRAFQ 530
              +  +++   N +E+A+     +                 +  +          +A +
Sbjct: 404 R--RTDRFEAFANKWELANAFSELNDPIDQKGRFIDQLRKRELGDDEAFEMDEDFLKALE 461

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG+  GIDR++MLL  + ++R+V LFP  +
Sbjct: 462 VGLPPTGGLGIGIDRVIMLLTNSPSIRDVLLFPTMK 497


>gi|238796546|ref|ZP_04640053.1| Lysyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238719524|gb|EEQ11333.1| Lysyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 505

 Score =  209 bits (531), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 75/357 (21%), Positives = 143/357 (40%), Gaps = 35/357 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y +    +L   ++   V ++G +   R  G   F+ ++D  G  Q+  + D     +  
Sbjct: 53  YGSKENEELEALNI--EVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYN 110

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++    +       TG++ +   ++ +L+ A   PLP        + 
Sbjct: 111 EEFKKWDL---GDILGARGKLF--KTKTGELSIHCNELRLLTKALR-PLPDKFHGLADQE 164

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL  +   +N  K R+++++ +R  M+ + F+E  TP++        AR F+
Sbjct: 165 TRYRQRYLDLIANDESRNTFKVRSQVMSGIRSFMVEKGFMEVETPMMQVIPGGASARPFV 224

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M
Sbjct: 225 THHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYM 282

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E + R + E                   ++ +YG    D   P     
Sbjct: 283 AYADYKDLIVLTEELFRTLTENILG--------------SSVVQYGEQTFDFGKPFAKLT 328

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351
           + E          + +  ++   +  AI         K  G  R  C+   E A S 
Sbjct: 329 MKEAICKYRPE--TNVADLDDMDKALAIAESLGIKVEKSWGLGRVQCEIFEETAESH 383



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 69/194 (35%), Gaps = 21/194 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P AK          R   ++ D D       D     + +   +   +  LG + C  FE
Sbjct: 323 PFAKLTMKEAICKYRPETNVADLDDM-----DKALAIAESLGIKVEKSWGLGRVQCEIFE 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND       +++    G EI +
Sbjct: 378 ------------ETAESHLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F++   +KE  ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFP 563
              +  +R+V LFP
Sbjct: 486 FTNSHTIRDVILFP 499


>gi|238752990|ref|ZP_04614449.1| Lysyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238708778|gb|EEQ01037.1| Lysyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 505

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 73/347 (21%), Positives = 137/347 (39%), Gaps = 33/347 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G +   R  G   F+ ++D  G  Q+  + D     +      +W L  
Sbjct: 61  LEALNIEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYNEEFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              D   K    R+++++ +R  M+ + F+E  TP++        AR F+          
Sbjct: 175 IANDESRKTFKIRSQVMSGIRSFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIV 292

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E + R + E                   ++ +YG    D   P     + E       
Sbjct: 293 LTEELFRTLTETVLG--------------SSVVQYGEQTFDFGKPFAKLTMKEAICKYRP 338

Query: 312 RVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351
              + +  ++   +  AI         K  G  R  C+   E A S 
Sbjct: 339 E--TNVADLDDMDKAVAIAESLGIKIEKSWGLGRIQCEIFEETAESH 383



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 70/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P AK          R   ++ D D       D     + +   +   +  LG I C  FE
Sbjct: 323 PFAKLTMKEAICKYRPETNVADLDDM-----DKAVAIAESLGIKIEKSWGLGRIQCEIFE 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND       +++    G EI +
Sbjct: 378 ------------ETAESHLIQPTFIIEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F++   +KE  ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|254977178|ref|ZP_05273650.1| lysyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255094508|ref|ZP_05323986.1| lysyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255102764|ref|ZP_05331741.1| lysyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255308585|ref|ZP_05352756.1| lysyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|255316259|ref|ZP_05357842.1| lysyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518920|ref|ZP_05386596.1| lysyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255652099|ref|ZP_05399001.1| lysyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260685072|ref|YP_003216357.1| lysyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260688730|ref|YP_003219864.1| lysyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306521833|ref|ZP_07408180.1| lysyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|260211235|emb|CBA66755.1| lysyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260214747|emb|CBE07437.1| lysyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 509

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 74/350 (21%), Positives = 137/350 (39%), Gaps = 26/350 (7%)

Query: 3   RY-RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           RY RTH   D+     S  G   +++G +   R  G   F+DI+D  G  Q     D+  
Sbjct: 43  RYDRTHYSMDIKDNFDSLEGKTTKIAGRIMSKRIQGKAGFIDIQDQEGRIQSYVRLDAIG 102

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E      +  +  I G+      E        G+I + A+ + +L  + +  LP     
Sbjct: 103 EEEYSVFSTYDIGDIVGI------EGEIFKTKKGEISVKAKSVVLLCKSLQ-VLPEKYHG 155

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEG 176
              + +R++ R++DL  +   KN    RT+ + ++R  +    F+E  TPIL T +    
Sbjct: 156 LKDQELRYRQRYVDLIVNPEVKNAFLIRTKALKALRAYLDDRGFLEVETPILNTIAGGAN 215

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + Y + L+  GFD+ +++   FR+E       P E+  
Sbjct: 216 ARPFITNHNTLHIPMY-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDLKHNP-EYTA 273

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +++  ++ +  D++   ENV+  + E  +    V+     I +    +R           
Sbjct: 274 IELYQAYADYTDMMEITENVIAHMAEVATGSMIVNYQGTEINFTPPWKR----------- 322

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           + M +  + +   +F   +             I  K G       +   E
Sbjct: 323 MSMEDCVKEYSGVDFSTINTDEEALEVAREKGIEIKPGMRRGEVINAFFE 372



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 69/171 (40%), Gaps = 16/171 (9%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---HNPFTMPQGGMESLKGNDL 474
             +A+E GI          +++  F+E   E+K I      H+P  +      ++   D 
Sbjct: 347 LEVAREKGIEIKPGMRRGEVINA-FFEEFGEDKLIQPTFITHHPVEVSPLSKRNV--EDP 403

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVML----QAFSNVGISKEVVENRFGGLYRAFQ 530
              +  +++   N +E+A+     +                 +  +          +A +
Sbjct: 404 R--RTDRFEAFANKWELANAFSELNDPIDQKGRFIDQLRKRELGDDEAFEMDEDFLKALE 461

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
            G+PP GG+  GIDR++MLL  + ++R+V LFP  +     +  +P+    
Sbjct: 462 VGLPPTGGLGIGIDRVIMLLTNSPSIRDVLLFPTMK----PIDNNPNKEEE 508


>gi|312793712|ref|YP_004026635.1| lysyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180852|gb|ADQ41022.1| lysyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 497

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 72/322 (22%), Positives = 135/322 (41%), Gaps = 24/322 (7%)

Query: 6   THSCGDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   D+  +     G FV ++G +   R HG   F+DI D  G  Q+    D    E  
Sbjct: 43  THYSTDIKENFEVFEGKFVCVAGRMLSKRGHGKASFVDILDTKGKIQIYIKIDEVGEEKY 102

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  +  + +   G ++    E        G+I + A++IE+L+     PLP         
Sbjct: 103 EEFKEYYDI---GDIIGVKGEVF--KTHKGEISVKAKEIEMLTKCLR-PLPEKWHGLKDV 156

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL  +   ++  +KR+ II S+R  +    F+E  TP+L+  +    AR F
Sbjct: 157 DTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFLDDRGFLEVETPVLSPIAGGAAARPF 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + + + L+  GFD+ +++   FR+E       P EF  +++ 
Sbjct: 217 ITHHNALDIDLY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIY 274

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKP 291
            ++ +  D++   E ++  V +E      ++           + R+   +AI++Y     
Sbjct: 275 QAYADYKDMMELTEKLITTVAQEVLGTLKITYQGQEIDLTPPWQRLTMVEAIKKY--VGV 332

Query: 292 DLRNPIIMHNVTEHFVHSEFRV 313
           D  N   +    +        V
Sbjct: 333 DFENVTSLDEARKIAKDLGIEV 354



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 7/161 (4%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
            +   +AR  IA++LGI     ++   I++   +E   E+  +          +    + 
Sbjct: 337 VTSLDEAR-KIAKDLGIEVEENWQVGHIIN-EVFEKKVEDFLVQPTFIMDYPVEVSPLAK 394

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
           +  D       +++L     EIA+     +      + F      ++             
Sbjct: 395 RKKDNPQF-TERFELFITCREIANAFSELNDPFDQKERFLEQLKERQRGNQEAHMMDEDF 453

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+VMLL  + ++R+V LFP  +
Sbjct: 454 IEALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFPTMR 494


>gi|114565688|ref|YP_752842.1| lysyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122319141|sp|Q0B0N3|SYK_SYNWW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|114336623|gb|ABI67471.1| lysyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 493

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 67/344 (19%), Positives = 131/344 (38%), Gaps = 28/344 (8%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKS 64
           +  +      G  + ++G +   R HG   F ++ D  G  Q+    D      +E+ K 
Sbjct: 42  NIKEAFSELEGKTIAIAGRIMSKRRHGKAGFANLADLSGSIQLYFRQDDLGPEKYELYKK 101

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +    +L I G V              G+I +  + +  LS +   PLP          +
Sbjct: 102 LDIGDILGIQGEVFRTQK---------GEISIHVRDLYYLSKSLT-PLPEKWHGLKDVEL 151

Query: 125 RFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182
           R++ R++DL  +   K   VKR+RII  MR  +    F+E  TP++        AR F+ 
Sbjct: 152 RYRQRYVDLIVNPEVKEVFVKRSRIIKEMRNYLDDRGFLEVETPMMQPIPGGATARPFIT 211

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y L  AP+ Y + L+  G ++ ++I   FR+E   +   P EF  L++  +
Sbjct: 212 HHNALDMELY-LRIAPELYLKRLIVGGLEKVYEINRNFRNEGISTRHNP-EFTMLEIYQA 269

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           + + + ++   E+++  V  + +    +     ++ +    RR           + M + 
Sbjct: 270 YGDYEVMMQLCEDLISAVMLKVNGSMQIDFEGEQLDFTPPWRR-----------VTMLDA 318

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
            +     +F +               +  K G       + + E
Sbjct: 319 IKEAAGLDFSLIKSDEDACQAAWQLGLEVKAGASRGELINEIFE 362



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 11/128 (8%)

Query: 443 YEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           +E   E+K I       +P  +      +L+  +       +++L     EIA+     +
Sbjct: 361 FEQFVEDKLIQPTFVYGHPVEVSPLAKRNLETPE----FTDRFELFIMQREIANAFSELN 416

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F      +   +            A + GMPP GG+  GIDR+VML+ G+ +
Sbjct: 417 DPIDQKERFIKQVEKRAGGDAEAHMMDEDYINALEYGMPPAGGMGIGIDRLVMLMTGSPS 476

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 477 IRDVILFP 484


>gi|332707653|ref|ZP_08427681.1| lysyl-tRNA synthetase, class II [Lyngbya majuscula 3L]
 gi|332353562|gb|EGJ33074.1| lysyl-tRNA synthetase, class II [Lyngbya majuscula 3L]
          Length = 572

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 63/334 (18%), Positives = 137/334 (41%), Gaps = 22/334 (6%)

Query: 10  GDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA---KSV 65
            DLG   +V   V ++G +   R  G + F +I+D  G  Q+  +      ++A    + 
Sbjct: 55  ADLGNGEEVDVEVAVAGRIIARRVFGKLAFFNIQDETGTIQLYLDKKRITAKMADLPNAF 114

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                L   G ++             G++ +  ++ +IL+ +  LPLP           R
Sbjct: 115 NILKKLTDTGDIIGAKGTIKRTE--KGELSIYVKEYDILTKSL-LPLPDKWHGLTDTEKR 171

Query: 126 FKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
           ++ R++DL  +  + +   +R +I  S+R  +  ++FIE  TP+L + +    AR F+  
Sbjct: 172 YRQRYVDLIVNPDVRETFRRRAKITASIRHYLNQQDFIEIETPVLQSEAGGADARPFITY 231

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               Q   Y L  A + + + L+  GF++ +++   FR+E   +   P EF  +++  ++
Sbjct: 232 HNTLQMDLY-LRIATELHLKRLIVGGFEKVYELGRVFRNEGISTRHNP-EFTMIEIYQAY 289

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            + + ++   EN++    +E     T++     I      R+           + M  + 
Sbjct: 290 ADYNQMMVLTENLISNAAKEVLGTLTINYQGEVIDLTPPWRK-----------VTMQELV 338

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
           +  +  +F  F+ I       +   +       +
Sbjct: 339 KDQIGLDFDKFTNIEQAKAAAKDAGVEVPNDCYS 372


>gi|167586750|ref|ZP_02379138.1| lysyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 508

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 67/308 (21%), Positives = 120/308 (38%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL      S           V ++G +   R  G   F  ++D  G  Q    P+
Sbjct: 43  THHAADLQAKFADSDKAALEANPVEVAVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPN 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +  +++ +LS A   PLP  
Sbjct: 103 DVGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVQCKELRLLSKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + +R++ R++DL            RT+ I S+R  M   +F+E  TP+L     
Sbjct: 156 FHGLADQEMRYRQRYVDLIVTPETRDTFRARTKTIASIRKFMDTADFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T+            F R+    AI+
Sbjct: 274 FTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFHRLTITQAIQ 333

Query: 285 RYGTDKPD 292
           +Y     D
Sbjct: 334 KYAPQYTD 341



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +  +     P       + +D +     +++L   G EIA+G    +  
Sbjct: 378 LFEETAEAQLWEPTY-IIDYPVEVSPLARASDTVPGITERFELFMTGREIANGFSELNDP 436

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      K+  +           RA + GMPP GG   GIDR+VMLL  +  +R
Sbjct: 437 EDQAARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIR 496

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 497 DVLLFP 502


>gi|89257628|gb|ABD65116.1| asparaginyl-tRNA synthetase, putative [Brassica oleracea]
          Length = 705

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 105/630 (16%), Positives = 189/630 (30%), Gaps = 86/630 (13%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
            D G+  VG  + + GWV  +R    + F++I D   ++ +    +    E    V +  
Sbjct: 92  ADEGLGRVGQSLSVMGWVRTLRSQSSVTFIEINDGSCLSNLQCVMNPDA-EGYDQVEAGS 150

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           VL   G  +S     + +     ++EL   KI ++   +        ++           
Sbjct: 151 VL--TGASVSVQGTIVASQGTKQKVELKVHKIILVGKCDSSYPIQ--KKRVSREFLRTKA 206

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ- 188
            L  R ++       R  +  +         F+  ++PI+TAS  EGA +    + +   
Sbjct: 207 HLRPRTNSFGAVARVRNTLAYATHKFFQESGFVWVASPIITASDCEGAGEQFCVTILIPS 266

Query: 189 -----------------------GSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRD 222
                                    F+  P       Q      A+     +   P FR 
Sbjct: 267 SHETTDSPIDAIPKTKGGLVDWSQDFFGKPAFLTVSGQLNGETYATALSDIYTFGPTFRA 326

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQ----------------DDILNTMENVL-RGVFEEFS 265
           E+  + R   EF+ L +    +                   + +   +  + +G+    S
Sbjct: 327 ENSNTSRHLAEFWNLLLPTWMMTWPVPPPTSPVKYVLDNCKEDMEFFDTWIEKGITHRLS 386

Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
           +   V   FL++ Y DAI        +   P+   +   +EH  +     F       P 
Sbjct: 387 DV--VEKEFLQLSYTDAIELLLKANKEFEFPVKWGLDLQSEHERYITEEAFEG----RPV 440

Query: 324 YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVN 383
                         R   D     A     P +  +         +  +      L +  
Sbjct: 441 IIRDYPKEIKAFYMRENDDGKTVAAMDMLVPRVGELIGGSQREERLEVLEARLDGLKLDK 500

Query: 384 TEAIR----VRLDMQDGDSCFFIAGDPLKFCSFAADARNHI------------AQELGII 427
                     R                ++F +   + R+ +            A EL + 
Sbjct: 501 ESYWWYLDLRRYGSVPHAGFGLGFERLVQFATGIDNIRDDVVEKEFLQLSYTDAIELLLK 560

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKID---FAHNPFTMPQGGME----SLKGNDLLSIKAF 480
               FEF   + +     +E E+ I    F   P  +     E     ++ ND     A 
Sbjct: 561 ANKEFEF--PVKWGLDLQSEHERYITEEAFEGRPVIIRDYPKEIKAFYMRENDDGKTVAA 618

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
              LV    E+  G  R    EV+      + + K      +       + G  PH G  
Sbjct: 619 MDMLVPRVGELIGGSQREERLEVLEARLDGLKLDK----ESYWWYLDLRRYGSVPHAGFG 674

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R+V    G  N+R+V  FP S    D
Sbjct: 675 LGFERLVQFATGIDNIRDVIPFPRSPGSAD 704


>gi|191165676|ref|ZP_03027516.1| lysyl-tRNA synthetase LysU [Escherichia coli B7A]
 gi|309796860|ref|ZP_07691262.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|190904371|gb|EDV64080.1| lysyl-tRNA synthetase LysU [Escherichia coli B7A]
 gi|308119501|gb|EFO56763.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7]
          Length = 505

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 77/364 (21%), Positives = 139/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D     Q+    
Sbjct: 42  RDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGDRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +E      V+              YG    D
Sbjct: 274 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT--------------YGEHVFD 319

Query: 293 LRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P     + E        ++        +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 426 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|242279993|ref|YP_002992122.1| lysyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242122887|gb|ACS80583.1| lysyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 508

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 69/339 (20%), Positives = 133/339 (39%), Gaps = 25/339 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +G   +L+G V   R  G + F  ++D  G  QV A  D    ++ K  +   +  I
Sbjct: 58  LEALGKKFKLAGRVITHRSFGKVAFFHLQDPTGRIQVYAARDDLGADLYKIFKKFDIGDI 117

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      E       T ++ + A K+++++ +   PLP           R++ R++DL
Sbjct: 118 VGV------EGTLFRTKTDELTVKADKVDLITKS-MRPLPEKYHGLKDVETRYRQRYVDL 170

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
                  +   KRT I+ ++R  + ++ F+E  TP++   +    AR F           
Sbjct: 171 IVTPRAREIFQKRTLIVRAIRNYLDSKGFMEVETPMMHPIAGGAAARPFTTHHNALDMQL 230

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y +  AP+ Y + L+  GF++ ++I   FR+E   S R   EF  L+   ++   +++++
Sbjct: 231 Y-MRIAPELYLKRLLVGGFEKVYEINRNFRNEGI-SVRHNPEFTMLEFYWAYANFENLMD 288

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E ++  V +E +    +     RI             P   + +  H   E       
Sbjct: 289 LTEEMISSVCKEVNGDTVIDYQDERIDLT----------PGAWHRMAFHESLEKVGGVSP 338

Query: 312 RVFSKILSVNPGYEVWAIPA----KGGGGNRAFCDRMNE 346
            V++         +     A    K G       D + E
Sbjct: 339 EVYNDYDKCKELVKKLGEKAVEGEKLGKLQAKLFDALVE 377


>gi|297620027|ref|YP_003708132.1| aspartyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297379004|gb|ADI37159.1| aspartyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 438

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 85/320 (26%), Positives = 139/320 (43%), Gaps = 19/320 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   ++        V L GWVH +R  G + F+ +RD  G  Q+V        E  + 
Sbjct: 9   RTHYSKEVVAEMNEQEVVLMGWVHSIRALGKLAFVILRDREGTIQLVVPKQKVSEETFEI 68

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES 123
            +          V++   + + +       E+   +I +L+ +   LPL    +      
Sbjct: 69  AKK----LGKEDVVAVKGKVVASEKAPNGFEIIPIEIRVLTKSNAPLPLDPAEKVPADID 124

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +RFLD+RR  +      R  ++ S+R       FIE +TP L AS+ EG  +    
Sbjct: 125 TRLDHRFLDIRRPKIQALFKIRAEMLKSVRNTFNDNGFIEVNTPKLVASATEGGTELFPI 184

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           S   + +F  L Q+PQ YKQ++MA GFDR F+IA  FR E+  + R   E   +DMEMSF
Sbjct: 185 SYFEKEAF--LGQSPQLYKQMMMAGGFDRVFEIAQIFRAEEHNTRRHLNEAVSIDMEMSF 242

Query: 244 VEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYGTDKP 291
            ++ D ++ +E V+   +++ +            N       F ++ Y +A+        
Sbjct: 243 SDEYDAMDILEKVVYNSYKDIAENRADEIETLGINFEVPDKKFTKLTYSEAVDIANGKGV 302

Query: 292 DLRNPIIMHNVTEHFVHSEF 311
           +L     +    E  V  E 
Sbjct: 303 ELEWGEDLSRAAEKAVGDEM 322



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 68/183 (37%), Gaps = 36/183 (19%)

Query: 389 VRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE 448
             +D+ +G       G+       +  A   +  E+G          +I ++P       
Sbjct: 292 EAVDIANGKGVELEWGE-----DLSRAAEKAVGDEMG-------GLYFITEWP------- 332

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
                    PF       ++             +DL+    EI SG  R H  +++++  
Sbjct: 333 -----TITRPFYTMPYEKDNK--------ICKAFDLMYKELEITSGAQRVHKYDLLVENI 379

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           S +G++       FG    AF+ GMPPH G   G DR  M+L   +N+RE  LFP  +  
Sbjct: 380 SKMGMNP----EGFGTYLEAFEYGMPPHAGFGLGADRFAMILGQEENIRECVLFPRDRQR 435

Query: 569 CDL 571
              
Sbjct: 436 LTP 438


>gi|148643296|ref|YP_001273809.1| aspartyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|148552313|gb|ABQ87441.1| aspartyl-tRNA synthetase, AspS [Methanobrevibacter smithii ATCC
           35061]
          Length = 439

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 154/352 (43%), Gaps = 25/352 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RT+   ++     G  V + GWVH +R  GGIIF+ IRD  G  Q+ A     D+   E 
Sbjct: 10  RTNYTKNVTPDLTGQDVIVMGWVHEIRDLGGIIFVIIRDREGKVQITAPSKKVDAEILED 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
            + +R E V+ I G V         AN     +E+  ++I +L++A +  P+    + + 
Sbjct: 70  IRKLRKESVVAIKGTVQE-------ANQAPTGVEIIPKEINLLNLANQPLPMDPTDKVKA 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RF+DLRRD +      + R+ +++R       F+E +TP L AS+ EG  + 
Sbjct: 123 EIDTRLDSRFIDLRRDNVSAIFKIKNRMFHTIRDFFYENGFMEINTPKLVASATEGGTEL 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F  L Q+PQ YKQ++M+SG D+ F+I   FR E+  + R   E   +D E
Sbjct: 183 FPITYFEKEAF--LGQSPQLYKQMMMSSGMDKVFEIGQIFRAEEHDTLRHLNEAVSIDAE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAIRRYGT 288
            SF++  D++  + N+L  V  + +                    F  + YD+A+    +
Sbjct: 241 ASFMDDIDVMKILNNMLEQVIIDINEDCKEELNILEHEMPVPDGPFPVVTYDEAVDIVNS 300

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
              ++     +    E  +      F  +       + + +        +A 
Sbjct: 301 RDVEMSWGEDLSRAGEKALGDVMGGFYFLTEWPSEIKPFYVMPNSKDPTKAH 352



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 74/195 (37%), Gaps = 30/195 (15%)

Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE-----FCW 436
                +   + + DG        + +   +   D      ++L              F +
Sbjct: 270 EELNILEHEMPVPDGPFPVVTYDEAVDIVNSR-DVEMSWGEDLSRAGEKALGDVMGGFYF 328

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           + ++P                PF +     +          KA  +DL+ N  E++SG  
Sbjct: 329 LTEWP------------SEIKPFYVMPNSKDP--------TKAHAFDLMYNNLELSSGAT 368

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  +V+++     G++       FG   +AF+ GMPPH G   G DR+ M+L G +N+
Sbjct: 369 RVHQYDVLVKQIEEKGLNV----ASFGSYLKAFEYGMPPHAGWGVGADRLAMVLTGVENI 424

Query: 557 REVSLFPMSQNFCDL 571
           RE  LFP  ++    
Sbjct: 425 RETVLFPRDRHRLTP 439


>gi|322831510|ref|YP_004211537.1| lysyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321166711|gb|ADW72410.1| lysyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 509

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 66/295 (22%), Positives = 124/295 (42%), Gaps = 21/295 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   +  +L   ++   V + G +   R  G   F+ ++D  G  Q+    D     I 
Sbjct: 54  KYGEKTNEELEALNI--EVTVGGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGIY 111

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
                +W L   G ++  + +       TG++ +   ++ +L+ A   PLP        +
Sbjct: 112 NEQFKKWDL---GDILGATGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLQDQ 165

Query: 123 SIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL  +   +     R++I++ +R  M+   F+E  TP++        AR F
Sbjct: 166 EARYRQRYLDLIANEDSRKTFKIRSQIMSGIRSFMVENGFMEVETPMMQVIPGGAAARPF 225

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  +++ 
Sbjct: 226 ITHHNALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGV-SPRHNPEFTMMELY 283

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSN---------GNTVSNNFLRICYDDAIRRY 286
           M++ +  D++   E + R + E                    F ++   +AI +Y
Sbjct: 284 MAYADYKDLIVLTETLFRTLTESVLGSSVVQYGDQTFDFGKPFAKLTMREAICKY 338



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 8/154 (5%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLS 476
             IA+ LGI     +    I+    +E   E + I       T     +  L + ND+  
Sbjct: 354 TAIAESLGIKIEKSWGLGRIV-TEIFEETAEAQLIQPTF--ITEYPAEVSPLARRNDVNP 410

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCG 532
               +++    G EI +G    + +E   Q F++   +K+  ++           A + G
Sbjct: 411 EITDRFEFFIGGREIGNGFSELNDAEDQAQRFADQVSAKDAGDDEAMFYDEDYVTALEHG 470

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +PP  G+  GIDR+VML   +  +R+V LFP  +
Sbjct: 471 LPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMR 504


>gi|223042067|ref|ZP_03612243.1| lysyl-tRNA synthase [Actinobacillus minor 202]
 gi|223017142|gb|EEF15578.1| lysyl-tRNA synthase [Actinobacillus minor 202]
          Length = 501

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 72/307 (23%), Positives = 131/307 (42%), Gaps = 28/307 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L   D+   V+++G +   R  G   F  I+D  G  Q+    D+    +       W L
Sbjct: 57  LKEQDI--QVKVAGRIMLKRVMGKASFFTIQDVSGQVQLYVARDNLAEGVYSDKVGLWDL 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++  S         TG++ +   ++E+L+ +   PLP   +    + IR++ R+L
Sbjct: 115 ---GDIVGVSGTLF--KTKTGELTVRCSEVELLTKSLR-PLPNKVQGITDQEIRYRQRYL 168

Query: 132 DLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +    +  + R+++++ +R   +   FIE  TP+L        AR F+        
Sbjct: 169 DLISNEESRRTFMIRSQVVSGIRQFFLERGFIEVETPMLQVIPGGAAARPFVTHHNALDV 228

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +  D+
Sbjct: 229 DMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMIEYYQAYADYHDL 286

Query: 250 LNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           ++  E +LR +  +      V            F RI   +AI +YG       N I M 
Sbjct: 287 MDNTEELLRKLALDILGTTDVPYGEYVFDFGKPFERITMHEAIVKYG-------NGISME 339

Query: 301 NVTEHFV 307
           ++ +   
Sbjct: 340 DLHDFDK 346



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 67/196 (34%), Gaps = 18/196 (9%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
                    +   +             D  K  + A      I +  G+ +        I
Sbjct: 316 FGKPFERITMHEAIVKYGNGISMEDLHDFDKAVAIAKGLHIEIQKSWGLGS--------I 367

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGG 495
           ++   +E   E + I      F M      S     ND       +++L   G EI +G 
Sbjct: 368 VNA-IFEEVAEHQLIQPT---FLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGF 423

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLL 551
              + +E   + F     +K+  ++           A + G+PP  G   GIDR+ M+  
Sbjct: 424 SELNDAEDQAERFDAQVAAKDAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMIFA 483

Query: 552 GAKNVREVSLFPMSQN 567
            A ++R+V LFP  + 
Sbjct: 484 NAPSIRDVILFPAMRQ 499


>gi|160871773|ref|ZP_02061905.1| lysyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120572|gb|EDP45910.1| lysyl-tRNA synthetase [Rickettsiella grylli]
          Length = 502

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 72/322 (22%), Positives = 136/322 (42%), Gaps = 37/322 (11%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H   DL           +      VR++G +   R  G  +F DI+D  G  Q+    
Sbjct: 39  RNHLTADLHHRFEQVDSDRLQQKNCSVRVAGRIMLKRDMGKSLFFDIQDMSGKMQIYVKQ 98

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLP 113
           D+   E  + ++   +  I G+V       +     T Q+ + A+K+++LS A   LP  
Sbjct: 99  DTVGVEHYEMIKRLDLGDIVGIV------GVLFRTKTNQLSVKAEKVDLLSKALRPLPDK 152

Query: 114 VFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
             G  E  +  R+++R+LDL  +    K    R+++I  +R  +    F+E  TP++   
Sbjct: 153 FHGLSESDKEQRYRHRYLDLMTNEKTRKTFQIRSQLIQEIRQFLNRRGFLEVETPMMHVL 212

Query: 173 SPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                AR F+          + L  AP+ + + L+  G ++ F+I   FR+E   +   P
Sbjct: 213 PGGALARPFITHHNALNMPLF-LRVAPELHLKRLVVGGMEKVFEINRSFRNEGLSTRHNP 271

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDA 282
            EF  L+   ++ +  D+++  E ++R + +       ++           F R+   DA
Sbjct: 272 -EFTMLEFYQAYSDYHDLMDLTEQLIRELAKTILTTEQLTYQGEIYDLSKPFKRLTMIDA 330

Query: 283 IRRYGTDKPDLRNPIIMHNVTE 304
           +  Y  +         +++VTE
Sbjct: 331 LLEYNPEWQ-------LNDVTE 345



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 62/177 (35%), Gaps = 9/177 (5%)

Query: 399 CFFIAGDPLKFCSFAADARNH-IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN 457
                    +       AR   IA +L I             F  +E   EEK +     
Sbjct: 330 ALLEYNPEWQLNDVTEFARLKKIAADLEIQPKESIGQL---QFAVFEETVEEK-LKQPTF 385

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE- 516
               P       + N      A +++L   G E+A+G    +  E     F    ++K  
Sbjct: 386 ITQYPIVVSPLARRNSENPDFADRFELYIGGRELANGFSELNDPEDQRARFKQQLLAKSK 445

Query: 517 ---VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                        +A + G+PP  G   GIDR+ ML   + ++R+V LFP+ +   D
Sbjct: 446 GDSEAMPYDEEYIQALEYGLPPTAGEGMGIDRLTMLFTDSVSIRDVILFPLMRPESD 502


>gi|227489351|ref|ZP_03919667.1| lysyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227090724|gb|EEI26036.1| lysyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 514

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 107/559 (19%), Positives = 192/559 (34%), Gaps = 124/559 (22%)

Query: 16  DVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           +VG      V ++G V   R  G + F  ++   G          +  E+ +     W  
Sbjct: 64  EVGEETDIVVSVAGRVIFFRNTGKLCFAKLQAGSG---ASVQAMISLAEVGEESLKNWKA 120

Query: 72  CID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            +D G ++S +   I++    G++ + A   ++ S A          +E  E  R ++R+
Sbjct: 121 DVDLGDIISVTGRVISSK--RGELSVMATDWQMASKALRPLP--VAHKEMSEDQRIRHRY 176

Query: 131 LDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
            DL  RD   KN + R +++ ++R  + +E F+E  TP+L        AR F+  S    
Sbjct: 177 TDLIMRDEARKNALTRIKVMRALRNFLESEGFLEVETPMLQTLHGGAAARPFVTHSNAMD 236

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  AP+ + +  +  G +R F++   FR+E   S   P EF  L+   ++ + + 
Sbjct: 237 MDLY-LRIAPELFLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFAMLETYQAWGDYNT 294

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
             + ++ +++ V  E     T                           + + + TE+   
Sbjct: 295 GADLIKRLIQSVATEVFGSTT---------------------------VTLVDGTEYDFG 327

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
            E++      S+N                R F           GQP              
Sbjct: 328 GEWKTLEMYPSLNE------------ALARKF----------PGQP-------------E 352

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           V     V         EAI   + ++ G    +  G  ++           I +   +  
Sbjct: 353 VTIDSSV------EELEAIADHIGLEKG--KGWGHGKFVE----------EIWE--FLCE 392

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              +   ++ DFP               +P T                    ++DL   G
Sbjct: 393 DQLYGPVFVRDFP------------VETSPLTRQHRS---------KPGVTEKWDLYVRG 431

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           FE+A+G        +  + F +         +           A +  MPP  G   GID
Sbjct: 432 FELATGYSELVDPVIQRERFEDQARLAAGGDDEAMELDEDFLFAMEQAMPPTSGNGMGID 491

Query: 545 RIVMLLLGAKNVREVSLFP 563
           R++M L G   +RE  LFP
Sbjct: 492 RLLMALTGLG-IRETVLFP 509


>gi|91772787|ref|YP_565479.1| aspartyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121684432|sp|Q12XU7|SYD_METBU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91711802|gb|ABE51729.1| Aspartyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 443

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 87/346 (25%), Positives = 154/346 (44%), Gaps = 29/346 (8%)

Query: 5   RTHSCGDLGVSDVGS-FVRLSGWVHRVRPHGGIIFLDIRDHYG---ITQVVANPDSACFE 60
           RTH    + +  +G   V + GWVH VR  GGI F+ +RD  G   IT V    D   F+
Sbjct: 7   RTHYTSQIDIEQIGDDKVTVCGWVHEVRDLGGICFVVVRDREGRAQITLVKKKIDKEIFD 66

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGERE 119
            A+ +  E ++ + G   +               E+  + I +L+ AE  LP+   G+ +
Sbjct: 67  AARKLVRESIVAVTGTAKAEGK-------APNGYEIIPESIVVLNEAESPLPMDTTGKVD 119

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   RF+DLRR+        R  ++ ++R  +  + +IE  +P + A++ EG   
Sbjct: 120 AELDTRLDSRFMDLRRERTTAIFKIRHEVLRAVRDFLSKDGYIETCSPKVVATATEGGTS 179

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               +  ++ +F  L Q+PQ +KQ+LM+ G D+ F+I P FR E+  + R   E   +D+
Sbjct: 180 LFPITYFDREAF--LNQSPQLFKQILMSGGLDKVFEIGPIFRAEEHDTRRHLNEATSIDI 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAIRRYG 287
           E SF++  D++  +E+++  V+E+                      F+++ Y  AI    
Sbjct: 238 EASFLDHFDVMEVLEDMVAYVYEQVIENEAASLKALDIELSVPKTPFMKVPYSQAIDIVN 297

Query: 288 TDKPD-LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +  + +     +  V EH +     VF +    +     W    K
Sbjct: 298 AESEETVEWGGDLGTVAEHTI--GEHVFKETGESHYFITDWPTEIK 341



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 72/202 (35%), Gaps = 34/202 (16%)

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF------- 432
              + +A+ + L +             +   +  ++       +LG +  +         
Sbjct: 266 EAASLKALDIELSVPKTPFMKVPYSQAIDIVNAESEETVEWGGDLGTVAEHTIGEHVFKE 325

Query: 433 ---EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
                 +I D+P                PF         L         +  +D++    
Sbjct: 326 TGESHYFITDWP------------TEIKPFYAMPYEDNPL--------ISKSFDMMHRTM 365

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E++SG  R H+ +++     + G+      + F    RAF+ GMPPH G   G +R+VM 
Sbjct: 366 ELSSGAQRIHIHDMLKARIESQGLD----SDGFDFYLRAFKYGMPPHSGWGIGCERLVMT 421

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           +L  +N+R+  LFP  +     
Sbjct: 422 MLSVENIRDTVLFPRDRKRLSP 443


>gi|281490916|ref|YP_003352896.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281374674|gb|ADA64194.1| Lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 494

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 76/351 (21%), Positives = 142/351 (40%), Gaps = 33/351 (9%)

Query: 2   HRY-RTHSCGDLGVSDVGSFV----------RLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           H++ RTH+  +L  +                 ++G +   R  G + F  ++D  G  Q+
Sbjct: 31  HKFTRTHNSQELHEAYDEKTKEELHELALSGIVAGRLMTKRGKGKVGFAHLQDREGQIQL 90

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    E  +  +   +    G  +    E +  ++  G++ + A+K+  LS A   
Sbjct: 91  YVRKDEVGEENYEIFKKADL----GDFLGVEGEIMKTDM--GELSIKAKKLTFLSKALR- 143

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           R++ R+LDL  +       V R++II+ +R  M    F+E  TPIL
Sbjct: 144 PLPEKFHGLTDTETRYRKRYLDLISNKESFDRFVTRSKIISEIRHYMDGRGFLEVETPIL 203

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            + +    AR F            AL  A + + + L+  G ++ ++I   FR+E   + 
Sbjct: 204 HSEAGGAAARPFFTHHNTLDIDM-ALRIALELHLKRLIVGGMEKVYEIGRVFRNEGMDTT 262

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICY 279
             P EF  L+   ++ +  D+++  E + + V +     + +  +         F R+  
Sbjct: 263 HNP-EFTMLESYEAYADFHDVMDLTEGIFQHVAKTVVGQDVLEYDGKEINVGGKFKRVHM 321

Query: 280 DDAIRR-YGTD-KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            DAI+   G D  P++          EH +H E    S    +N  +E + 
Sbjct: 322 VDAIKEVAGVDFWPEMTFEEATALAKEHDIHVEKHFTSVGHIINEFFEKYV 372



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  I      F  P+      K N+       +++L  NG E A+     +  
Sbjct: 367 FFEKYVEETLIQPTFV-FGHPKEISPLAKMNEKDPRFTDRFELFINGKEYANAFSELNDP 425

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
              L+ F     +KE+ ++   G       A + GMPP GG+  GIDR+VML  G  ++R
Sbjct: 426 IDQLERFEAQAKAKELGDDEATGVDYDYVEALEHGMPPTGGLGIGIDRLVMLFTGTTSIR 485

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 486 DVLLFPTMK 494


>gi|238759278|ref|ZP_04620444.1| Lysyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238702439|gb|EEP94990.1| Lysyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 505

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 71/347 (20%), Positives = 138/347 (39%), Gaps = 33/347 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G +   R  G   F+ ++D  G  Q+  + D     +      +W L  
Sbjct: 61  LEALNIEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLAEGVYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDL 174

Query: 134 RRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   ++    R+++++ +R  M+ + F+E  TP++        AR F+          
Sbjct: 175 IANDDSRHTFKIRSQVMSGIRSFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++ 
Sbjct: 235 Y-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIV 292

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E + R + E                   ++ +YG    D   P     + E       
Sbjct: 293 LTEELFRTLTETILG--------------SSVVQYGEQTFDFGKPFAKLTMKEAICKYRP 338

Query: 312 RVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351
              + +  ++   +  AI         K  G  R  C+   E A S 
Sbjct: 339 E--TNVADLDDMDKAVAIAESLGVKVEKSWGLGRVQCEIFEETAESH 383



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 70/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P AK          R   ++ D D       D     + +   +   +  LG + C  FE
Sbjct: 323 PFAKLTMKEAICKYRPETNVADLDDM-----DKAVAIAESLGVKVEKSWGLGRVQCEIFE 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND       +++    G EI +
Sbjct: 378 ------------ETAESHLVQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F++   +KE  ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFADQVSAKEAGDDEAMFFDEDYVTALEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|107028702|ref|YP_625797.1| lysyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116690139|ref|YP_835762.1| lysyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|170733472|ref|YP_001765419.1| lysyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|254247790|ref|ZP_04941111.1| Lysyl-tRNA synthetase (class II) [Burkholderia cenocepacia PC184]
 gi|122977748|sp|Q1BHT1|SYK_BURCA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229795|sp|A0K8P2|SYK_BURCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238688559|sp|B1JUZ7|SYK_BURCC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|105897866|gb|ABF80824.1| lysyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116648228|gb|ABK08869.1| lysyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|124872566|gb|EAY64282.1| Lysyl-tRNA synthetase (class II) [Burkholderia cenocepacia PC184]
 gi|169816714|gb|ACA91297.1| lysyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 508

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 66/307 (21%), Positives = 120/307 (39%), Gaps = 30/307 (9%)

Query: 7   HSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           H   DL      S           V ++G +   R  G   F  ++D  G  Q    P+ 
Sbjct: 44  HHAADLQAKFADSDKAALEANPVEVSVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPND 103

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +   + +   +  I       +A  +      G++ +  +++ +LS A   PLP   
Sbjct: 104 VGADTYDAFKKWDLGDI------VAARGVLFRTNKGELSVQCKELRLLSKALR-PLPDKF 156

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
                + +R++ R++DL            RT+ I S+R  M   +F+E  TP+L      
Sbjct: 157 HGLSDQEMRYRQRYVDLIVTPETRDTFRARTKTIASIRKFMDNADFMEVETPMLHPIPGG 216

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF
Sbjct: 217 AAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEF 274

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRR 285
             ++   ++ +   +++  E ++R    +     T+            F R+    AI++
Sbjct: 275 TMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFHRLTITQAIQK 334

Query: 286 YGTDKPD 292
           Y  D  D
Sbjct: 335 YAPDYTD 341



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 58/337 (17%), Positives = 104/337 (30%), Gaps = 46/337 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++  D +     +L  +      G   +  F+       ++ +    P+L    ++   
Sbjct: 196 FMDNADFMEVETPMLHPI-----PGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVGG 250

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQG--QPGLAYI 359
            E          ++ +S     E   +         R   D   +  R       G A I
Sbjct: 251 FERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATI 310

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG---------DPLKFC 410
            ++  E         +   +     +      D Q  D  F              P    
Sbjct: 311 QYQGRELDLAKPFHRLT--ITQAIQKYAPDYTDGQLSDDAFLRTELKRFGVDVSQPAFLN 368

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           +     +  + +E        +E  +I+D+P                            +
Sbjct: 369 AGIGALQLALFEE--TAEAQLWEPTFIIDYP---------------------VEVSPLAR 405

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LY 526
            +D +     +++L   G EIA+G    +  E     F      K+  +           
Sbjct: 406 ASDTVPGITERFELFMTGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMFFDADYI 465

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 466 RALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|224824517|ref|ZP_03697624.1| lysyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603010|gb|EEG09186.1| lysyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 500

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 62/308 (20%), Positives = 123/308 (39%), Gaps = 29/308 (9%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R+H    L  +               V + G +   R  G   F  ++D  G  Q+  + 
Sbjct: 40  RSHMARQLHDAHDDKEREQLEGEQIEVAVVGRMMLKRVMGKASFATLQDGSGRIQIFVSN 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E     +   +  I       +A        TG++ + A ++ +LS +   PLP 
Sbjct: 100 DKTGLEQHDQFKHWDMGDI------VAARGTLFKTKTGELTVQANEVRLLSKSIR-PLPE 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  +++ R+LDL  +   +++  KR++I+  +R  M+ E ++E  TP++    
Sbjct: 153 KFHGLTDQEQKYRQRYLDLIMNEQSRDVFTKRSQIVQGIRSYMVDEGYLEVETPMMHPIP 212

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+          Y L  AP+ Y + L+  G +R F+I   FR+E   +   P 
Sbjct: 213 GGATAKPFVTHHNALDMPLY-LRIAPELYLKRLVVGGLERVFEINRNFRNEGMSTRHNP- 270

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--------FLRICYDDAIR 284
           EF  ++   ++ +   ++   E V++ + ++      +           F R+    AI+
Sbjct: 271 EFTMMEFYEAYSDYQRMMEMTEGVIQKLAKDILGTLHIQYQGKTVDLSKFERLTIVGAIK 330

Query: 285 RYGTDKPD 292
           +Y     D
Sbjct: 331 KYNPHYSD 338



 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 76/202 (37%), Gaps = 30/202 (14%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +G + K+    + E +  R  +++  +     G            +  + +E     
Sbjct: 323 LTIVGAIKKYNPHYSDEQLHDRAWLKEEIARL---GGKPVLTDGIGGLQLSLFEEC--AE 377

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              +   +I+D+P                            +G+D  +    +++L   G
Sbjct: 378 SQLWNPTFIVDYP---------------------VEVSPLARGSDKHAGITERFELFVVG 416

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            E+A+G    +  E     F      K+  ++          RA + G+PP GG   GID
Sbjct: 417 RELANGYSELNDPEDQAARFLAQVQQKDAGDDEAMHYDADYIRALEFGLPPTGGCGIGID 476

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VMLL  + ++R+V LFP  +
Sbjct: 477 RLVMLLTDSPSIRDVILFPQMR 498


>gi|292492473|ref|YP_003527912.1| lysyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291581068|gb|ADE15525.1| lysyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 500

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 64/311 (20%), Positives = 126/311 (40%), Gaps = 25/311 (8%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+++G +   R  G   F  I+D  G  Q+    D    E  +  +   +  I G    
Sbjct: 58  RVKVAGRMMTRRIMGKASFAHIQDMSGRIQLYIRRDQLPEEGYREFKRWDIGDIVG---- 113

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
             AE +     +G++ +    + +L+ +   PLP        +  R++ R+LDL  + + 
Sbjct: 114 --AEGVLMKTNSGELSVRVDGLRLLTKSLR-PLPEKFHGLADQETRYRQRYLDLIMNEVT 170

Query: 140 KNIVKRTR-IINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQA 197
           +   +R   II+ +R  +  + F+E  TP++ A      AR F+          + L  A
Sbjct: 171 RETFRRRSYIIDRIRRYLGDKGFLEVETPMMQAIPGGAVARPFITYHNTLDMELF-LRIA 229

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF++ F+I   FR+E   +   P EF  L+   ++   +D+++  E ++
Sbjct: 230 PELYLKRLVVGGFEKVFEINRNFRNEGLSARHNP-EFTMLEFYQAYATYEDLMDLTEAMM 288

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
           R + +       ++              Y  +  D  +P    ++ E  +     +F   
Sbjct: 289 RDLAQTVLGSTEIT--------------YQGETYDFGSPFTRMSLKESILSFNPDIFPAD 334

Query: 318 LSVNPGYEVWA 328
           L   P     A
Sbjct: 335 LETLPAARRVA 345



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 66/165 (40%), Gaps = 7/165 (4%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                AR  +A+ L I     +    I     +E   E  ++         P       +
Sbjct: 336 ETLPAAR-RVAEHLDIPLRESYGLGKI-QLEIFEKTVES-RLKNPTFITAYPTEVSPLAR 392

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LY 526
            N+   + A +++    G+EIA+G    + +E   + F      +E  +           
Sbjct: 393 RNETDPLVADRFEFFVGGWEIANGFSELNDAEDQAERFRAQLQDREAGDQEAMHFDMDYI 452

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +A + GMPP  G   GIDR+VMLL  + ++R+V LFP  +    L
Sbjct: 453 QALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVLLFPHMRPREKL 497


>gi|253988707|ref|YP_003040063.1| lysyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|211637968|emb|CAR66596.1| lysyl-trna synthetase (ec 6.1.1.6) (lysine--trna ligase) (lysrs)
           [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253780157|emb|CAQ83318.1| lysyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 504

 Score =  208 bits (530), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 77/356 (21%), Positives = 139/356 (39%), Gaps = 31/356 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   +  +L   ++   V + G +   R  G   F+ ++D  G  Q+    D     I 
Sbjct: 51  KYDDKTQEELEALNI--EVTVGGRMMTRRIMGKASFVTLQDAGGRIQLYVARDDLPEGIY 108

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
                +W L   G ++    +       TG++ +   ++ +L+ A   PLP        +
Sbjct: 109 NEQFKKWDL---GDILGARGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLADQ 162

Query: 123 SIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL  +   +     R+++++ MR  +I++ F+E  TP++        AR F
Sbjct: 163 ETRYRQRYLDLIANEESRKTFQIRSQVLSVMRNFIISKGFMEVETPMMQVIPGGAAARPF 222

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  L++ 
Sbjct: 223 VTHHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMLELY 280

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           M++ +  D++  +E + R + +       V               YG  + D   P    
Sbjct: 281 MAYADYKDLIVLIEELFRTLAQNVLGDTRVK--------------YGEQEFDFGKPFAQM 326

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAI-----PAKGGGGNRAFCDRMNEWARSQ 351
           ++ E             L         A        KG G  R  C+   E A S+
Sbjct: 327 SMKEAICKYRPETNMADLDDMDKAVAIAESLGIDVEKGWGLGRVQCEIFEETAESR 382



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 59/166 (35%), Gaps = 16/166 (9%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
           D     + +          LG + C  FE               E ++         P  
Sbjct: 348 DKAVAIAESLGIDVEKGWGLGRVQCEIFE------------ETAESRLIQPTFITEYPAE 395

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                + N+       +++    G EI +G    + +E   + F+     K+  ++    
Sbjct: 396 VSPLARRNNDNPFITDRFEFFIGGREIGNGFSELNDAEDQAERFAEQVRQKDEGDDEAMF 455

Query: 525 L----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                  A + GMPP  G+  GIDR+VML   +  +R+V LFP  +
Sbjct: 456 YDEDYITALEHGMPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMR 501


>gi|255030315|ref|ZP_05302266.1| lysyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 484

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 143/373 (38%), Gaps = 28/373 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +    V ++G +   R  G + F  I+D +   Q+    D+   +     +   +  I
Sbjct: 56  LEEAAIEVSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKLADLGDI 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      +       TG++ + A +  +LS +   PLP           R++ R+LDL
Sbjct: 116 IGI------KGTIFRTNTGELSVKATEFTLLSKSLR-PLPDKYHGLKDVEQRYRQRYLDL 168

Query: 134 RRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +       V R++I+   R  M  + F+E  TP+L T +    A+ F+          
Sbjct: 169 ITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMEL 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++
Sbjct: 229 Y-LRIALELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMD 286

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +E ++  V ++ +              +     Y  D       I M +  + +V  +F
Sbjct: 287 LVEGLVSTVCKQVNG-----------TTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDF 335

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
              +         +   +P      +  +   +NE+  +  +  L    +     G+   
Sbjct: 336 WNVTSDEEARELAKKHDVPV---TEHMTYGHILNEFFETYVEEKLIQPTFVY---GHPVE 389

Query: 372 MGPVAKHLNIVNT 384
           + P+AK       
Sbjct: 390 ISPLAKKNKEDER 402



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 5/118 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + K  +       +++L   G E A+     +  
Sbjct: 368 FFETYVEEKLIQPTFVYGHPVEISPLAKKNKEDERF-TDRFELFIVGREHANAFSELNDP 426

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
               + F      +E   +   G       A + G+PP GG+  GIDR+VMLL  A +
Sbjct: 427 IDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPS 484


>gi|283955824|ref|ZP_06373315.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792779|gb|EFC31557.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 501

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 100/550 (18%), Positives = 193/550 (35%), Gaps = 122/550 (22%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +  +R  G  IF +I D     Q+  + DS   E+   ++    L +  +V+   
Sbjct: 59  VVAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYAILKKN--LEVGDIVL--- 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
            +       TG+  L A ++++ + A  +PLP           R++ R++D+  +  + K
Sbjct: 114 VKGFPFVTKTGEFSLHASEVKLATKA-IVPLPEKYHGLTDIEQRYRKRYVDMIMNAEVRK 172

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           + + R+++++ +R     + F+E  TP++   +        V    + G    L  AP+ 
Sbjct: 173 DFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPEL 232

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF+  F+I  CFR+E                          ++   N     
Sbjct: 233 YLKRLVVGGFEAVFEINRCFRNEG-------------------------MDLTHN----- 262

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
                        F  I +  A   Y            + ++TE             L +
Sbjct: 263 -----------PEFTTIEFYWAYHNYKD----------LMDLTEELF---------ALLL 292

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
           +       I   G         +M ++++          F R+     +   G + + L 
Sbjct: 293 DKLNLGKTIEFDG---------KMIDFSKP---------FERITYKDALCKYGGLDRDL- 333

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
           I + E I  +L         F A + L+        +  +      +        +++DF
Sbjct: 334 IEDKEKILTKLKAD-----GFEANEKLE----LGHLQAELFD--NYVEEKLINPTFVIDF 382

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P             + +P +        +         A +++L   G E+A+G    + 
Sbjct: 383 P------------ISISPLSRRSDEDSQI---------AERFELFICGRELANGFNELND 421

Query: 501 SEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                + F     +K   +            A   GMPP  G   GIDR+VMLL   K++
Sbjct: 422 PLDQYERFLKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKSI 481

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 482 RDVILFPAMR 491


>gi|15602054|ref|NP_245126.1| lysyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|13431878|sp|P57822|SYK_PASMU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|12720410|gb|AAK02273.1| LysU [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 501

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 68/287 (23%), Positives = 124/287 (43%), Gaps = 21/287 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L   +V   V+++G +   R  G   F+ ++D  G  Q+    D+    I      +W L
Sbjct: 56  LKAQEV--EVKVAGRIMTRRAMGKATFITLQDMSGRIQLYVARDNLPEGIYADDVGQWDL 113

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++            T ++ +   ++++L+ A   PLP        +  R++ R+L
Sbjct: 114 ---GDIIGVKGTLF--KTKTNELTVRCTEVQLLTKALR-PLPDKFHGLSDQETRYRQRYL 167

Query: 132 DLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +    +  + R+++I  +R   +++ F+E  TP+L        AR F+        
Sbjct: 168 DLIANEDSRRTFIIRSKVIAGIREYFLSKGFMEVETPMLQIIPGGASARPFVTHHNALDV 227

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+
Sbjct: 228 DMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDL 285

Query: 250 LNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYG 287
           ++  E +LR +  +      V            F RI   DAI +YG
Sbjct: 286 MDNTEELLRKLAMDILGTTIVPYGELEFDFGKPFERITMHDAILKYG 332



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 68/181 (37%), Gaps = 12/181 (6%)

Query: 395 DGDSCFFIAGDPLKFCSFAADA-R-NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
             D+      +         D  R   +A++LGI     +    +++   +E   E   I
Sbjct: 324 MHDAILKYGAEKGIVKEDLYDFDRAVAVAKKLGIEVQKSWGLGSLVNV-IFEEVAEHHLI 382

Query: 453 DFAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                 F M      S     ND       +++L   G EI +G    + +E   + F  
Sbjct: 383 QPT---FLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNERFDA 439

Query: 511 VGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  +
Sbjct: 440 QVAAKEAGDDEAMFKDEDFVTALEHGLPPTAGEGLGIDRLAMLFANAASIRDVILFPAMK 499

Query: 567 N 567
            
Sbjct: 500 Q 500


>gi|237807750|ref|YP_002892190.1| lysyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259511537|sp|C4LCP0|SYK_TOLAT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|237500011|gb|ACQ92604.1| lysyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 513

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 65/285 (22%), Positives = 121/285 (42%), Gaps = 24/285 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +   R  G   F  ++D  G  Q+    D            +W L   G ++  
Sbjct: 70  VKIAGRIMTRRIMGKASFATLQDMGGKIQIYVTRDDLPEGFYNEQFKKWDL---GDIVGV 126

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                  N  TG++ +    I +L+ A   PLP   +    +  R + R+LDL  +   +
Sbjct: 127 EGYMFRTN--TGELSVHTTSIRLLTKALR-PLPEKHKGLTDQEARCRQRYLDLIANEESR 183

Query: 141 NIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
                R +++N +R  + ++NF+E  TP++        AR F+          Y L  AP
Sbjct: 184 RTFQIRNQVMNGIRNFLNSKNFMEVETPMMQVIPGGASARPFVTHHNALDIDMY-LRIAP 242

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R +++   FR+E   S R   EF  L+  M++ + +D+++  E +LR
Sbjct: 243 ELYLKRLVVGGFERVYEVNRNFRNEGI-SVRHNPEFTMLEFYMAYADYNDLMDLTEEMLR 301

Query: 259 GVFEEFSNGNTVSN--------------NFLRICYDDAIRRYGTD 289
            + +       +                 F R+   ++I +YG D
Sbjct: 302 TLAQNIHGTTKIRYAKDGEEGIEIDFGQPFARMTMVESILKYGND 346



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 448 EEKKIDFAHNP-FTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
           EE      H P F        S     ND       +++    G EIA+G    + +E  
Sbjct: 384 EETAEHMLHQPTFITEYPAAVSPLARRNDDNPEVTDRFEFFIGGREIANGFSELNDAEDQ 443

Query: 505 LQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            + F      KE  ++           A + G+PP  G   GIDR+VML   +  +R+V 
Sbjct: 444 AERFQAQVAQKEAGDDEAMFYDADFVTALEHGLPPTAGQGIGIDRLVMLFTNSHTIRDVI 503

Query: 561 LFP 563
           LFP
Sbjct: 504 LFP 506


>gi|56707357|ref|YP_169253.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110669827|ref|YP_666384.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|254370939|ref|ZP_04986944.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874191|ref|ZP_05246901.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56603849|emb|CAG44825.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320160|emb|CAL08208.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569182|gb|EDN34836.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254840190|gb|EET18626.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
          Length = 576

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 70/300 (23%), Positives = 129/300 (43%), Gaps = 17/300 (5%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV            
Sbjct: 122 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPDGQY 181

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++ ++   LC  G ++  +      N  TG++ + A   EIL+ A   PLP        +
Sbjct: 182 ETFKN---LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHGLADQ 235

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +   + + K R++++N +R      +F+E  TP++      GA    
Sbjct: 236 EMRYRQRYVDLITNEKAREVFKVRSKVVNFIRNYFDRLDFMEVETPMMHVLQGGGAAKPF 295

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  L+  M
Sbjct: 296 KTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTMLEFYM 354

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPD 292
           ++ + +D+++  E++L  + +E      +            + RI   D+I +Y  D   
Sbjct: 355 AYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYNDDITK 414



 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 106/337 (31%), Gaps = 44/337 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---- 298
           + ++ D +     ++         G   +  F        +  Y    P+L    +    
Sbjct: 269 YFDRLDFMEVETPMMH-----VLQGGGAAKPFKTHHNALDMPLYLRIAPELYLKRLVVGG 323

Query: 299 MHNVTEHFVH-SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQPGL 356
              V E   +     V S+        E +   A          D +++  +   G   L
Sbjct: 324 FERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEIL 383

Query: 357 AYIFWRLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            Y  ++++  G    +     + K+ + +  E +      +            ++     
Sbjct: 384 EYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKK---IAEKLKIKVEAYHEL 440

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               N I +E   +     +  +I D+P               +P    Q G        
Sbjct: 441 GHLINEIFEE--TVEHQLIQPTFITDYP------------AVVSPLARRQDGNPEFTD-- 484

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  +++      E+A+G    + +E   + F     +     +          RA 
Sbjct: 485 -------RFEFFIGAREVANGFSELNDAEDQAERFRKQVEAAASGDDEAMPYDKDYIRAL 537

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP  G   GIDR+VM L  ++++R+V LFP  +
Sbjct: 538 EYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFPHMK 574


>gi|88597300|ref|ZP_01100535.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|121612659|ref|YP_001000112.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005070|ref|ZP_02270828.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|205355949|ref|ZP_03222717.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|218562059|ref|YP_002343838.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|8928543|sp|P41258|SYK_CAMJE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229804|sp|A1VYC1|SYK_CAMJJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|87250122|gb|EAQ73080.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|88190361|gb|EAQ94335.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359765|emb|CAL34551.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|205346073|gb|EDZ32708.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|284925672|gb|ADC28024.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315926687|gb|EFV06066.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315929054|gb|EFV08292.1| Lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 501

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 99/550 (18%), Positives = 191/550 (34%), Gaps = 122/550 (22%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +  +R  G  IF +I D     Q+  + DS   E+   ++    L +  +V+   
Sbjct: 59  VVAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKN--LEVGDIVL--- 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
            +       TG+  L A ++++ + A  +PLP           R++ R++D+  +  + K
Sbjct: 114 VKGFPFVTKTGEFSLHASEVKLATKA-IVPLPEKYHGLTDIEQRYRKRYVDMIMNVEVRK 172

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           + + R+++++ +R     + F+E  TP++   +        V    + G    L  AP+ 
Sbjct: 173 DFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPEL 232

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF+  F+I  CFR+E                          ++   N     
Sbjct: 233 YLKRLIVGGFEAVFEINRCFRNEG-------------------------MDLTHN----- 262

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
                        F  I +  A   Y            + ++TE        +F+ +L  
Sbjct: 263 -----------PEFTTIEFYWAYHNYKD----------LMDLTEE-------LFALLLDK 294

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
               +      K    ++ F                     R+     +   G + + L 
Sbjct: 295 LNLGKTIEFDGKMINFSKPFE--------------------RITYKDALCKYGGLDRDL- 333

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
           I + E I  +L         F A + L+        +  +      +        +++DF
Sbjct: 334 IEDKEKILTKLKAD-----GFEANEKLE----LGHLQAELFD--NYVEEKLINPTFVIDF 382

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P             + +P +        +         A +++L   G E+A+G    + 
Sbjct: 383 P------------ISISPLSRRSDEDSQI---------AERFELFICGRELANGFNELND 421

Query: 501 SEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                + F     +K   +            A   GMPP  G   GIDR+VMLL   K++
Sbjct: 422 PLDQYERFLKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKSI 481

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 482 RDVILFPAMR 491


>gi|86149179|ref|ZP_01067411.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85840537|gb|EAQ57794.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
          Length = 501

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 99/550 (18%), Positives = 191/550 (34%), Gaps = 122/550 (22%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +  +R  G  IF +I D     Q+  + DS   E+   ++    L +  +V+   
Sbjct: 59  VVAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKN--LEVGDIVL--- 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
            +       TG+  L A ++++ + A  +PLP           R++ R++D+  +  + K
Sbjct: 114 VKGFPFVTKTGEFSLHASEVKLATKA-IVPLPEKYHGLTDIEQRYRKRYVDMIMNVEVRK 172

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           + + R+++++ +R     + F+E  TP++   +        V    + G    L  AP+ 
Sbjct: 173 DFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGIERFLRIAPEL 232

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF+  F+I  CFR+E                          ++   N     
Sbjct: 233 YLKRLIVGGFEAVFEINRCFRNEG-------------------------MDLTHN----- 262

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
                        F  I +  A   Y            + ++TE        +F+ +L  
Sbjct: 263 -----------PEFTTIEFYWAYHNYKD----------LMDLTEE-------LFALLLDK 294

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
               +      K    ++ F                     R+     +   G + + L 
Sbjct: 295 LNLGKTIEFDGKMINFSKPFE--------------------RITYKDALCKYGGLDRDL- 333

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
           I + E I  +L         F A + L+        +  +      +        +++DF
Sbjct: 334 IEDKEKILTKLKAD-----GFEANEKLE----LGHLQAELFD--NYVEEKLINPTFVIDF 382

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P             + +P +        +         A +++L   G E+A+G    + 
Sbjct: 383 P------------ISISPLSRRSDEDSQI---------AERFELFICGRELANGFNELND 421

Query: 501 SEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                + F     +K   +            A   GMPP  G   GIDR+VMLL   K++
Sbjct: 422 PLDQYERFLKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKSI 481

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 482 RDVILFPAMR 491


>gi|328675335|gb|AEB28010.1| Lysyl-tRNA synthetase (class II) [Francisella cf. novicida 3523]
          Length = 560

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 69/300 (23%), Positives = 129/300 (43%), Gaps = 17/300 (5%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RY   +  +L   D     +L+G V   R  G   F+ ++D+ G  QV            
Sbjct: 106 RYADKTKQELEELDNKQQYKLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPEGQY 165

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++ ++   LC  G ++  S      N  TG++ + A   EIL+ A   PLP        +
Sbjct: 166 ETFKN---LCDLGDIVGISGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHGLADQ 219

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++       A    
Sbjct: 220 EMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDKLDFMEVETPMMHVLQGGAAAKPF 279

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  L+  M
Sbjct: 280 KTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTMLEFYM 338

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPD 292
           ++ + +D+++  E++L  + +E      +            + RI   D+I +Y  D   
Sbjct: 339 AYADYNDLMDLTEDMLSKLVQEVIGSEVLEYGEYKINFGGKYERISMVDSIVKYNDDITK 398



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 50/337 (14%), Positives = 105/337 (31%), Gaps = 44/337 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---- 298
           + ++ D +     ++         G   +  F        +  Y    P+L    +    
Sbjct: 253 YFDKLDFMEVETPMMH-----VLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVVGG 307

Query: 299 MHNVTEHFVH-SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQPGL 356
              V E   +     V S+        E +   A          D +++  +   G   L
Sbjct: 308 FERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEVL 367

Query: 357 AYIFWRLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            Y  ++++  G    +     + K+ + +  E +      +            ++     
Sbjct: 368 EYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKK---IAEKLKIKVEAYHEL 424

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               N I +E   +     +  +I D+P               +P    Q          
Sbjct: 425 GHLINEIFEE--TVEHQLIQPTFITDYP------------AVVSPLARRQDSNPEFTD-- 468

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  +++      E+A+G    + +E   + F     +     +          RA 
Sbjct: 469 -------RFEFFIGAREVANGFSELNDAEDQAERFRKQVEAAASGDDEAMPYDKDYIRAL 521

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + G+PP  G   GIDR+VM L  ++++R+V LFP  +
Sbjct: 522 EYGLPPTAGQGIGIDRLVMYLTNSQSIRDVILFPHMK 558


>gi|319654915|ref|ZP_08008989.1| lysyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317393340|gb|EFV74104.1| lysyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 496

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 70/390 (17%), Positives = 142/390 (36%), Gaps = 38/390 (9%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R+H   +L             +    V L+G +   R  G   F  I+D  G  Q+    
Sbjct: 36  RSHQSKELIEQYGELEKEEIEEKNVSVTLAGRIMTKRGKGKAGFAHIQDLSGQIQIYIRK 95

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E      S  +  I G+               G++ + AQ+ ++L+ +   PLP 
Sbjct: 96  DAVGEENYAIFESADLGDIIGV------SGTLFKTKVGELSVKAQEFDLLTKSLR-PLPD 148

Query: 115 FGEREYPESIRFKYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                     R++ R+LDL   +   +  + R+RII SMR  + +  ++E  TP++ + +
Sbjct: 149 KFHGLKDVEQRYRQRYLDLIMSEESKQTFITRSRIIQSMRRYLDSHGYLEVETPMMHSIA 208

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 209 GGASARPFITHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP- 266

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  DI++  EN++  + +E                      Y  D   
Sbjct: 267 EFTMIELYEAYADYRDIMSLTENLIAHIAQEVLG-----------TTSVQYGEYEVDLKP 315

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
               + M +  + +   +F   +         +   +  K         +   E    + 
Sbjct: 316 EWKRLHMVDAIKEYTGVDFWKETSKEEAQQLAKEHGVEIKDNMEYGHIVNEFFEQKVEEK 375

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
                +I+      G+   + P+AK     
Sbjct: 376 LIQPTFIY------GHPVEISPLAKKNEED 399



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 12/156 (7%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLS 476
           +A+E G+   +  E+  I++  F+E   EEK I       +P  +    +      D   
Sbjct: 346 LAKEHGVEIKDNMEYGHIVN-EFFEQKVEEKLIQPTFIYGHPVEISP--LAKKNEEDPR- 401

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++L     E A+     +      + F      +E   +           A + G
Sbjct: 402 -FTDRFELFIVAREHANAFTELNDPIDQRERFEAQLKEREEGNDEAHMMDDDFIEALEYG 460

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           MPP GG+  GIDR+VMLL  + ++R+V LFP+ ++ 
Sbjct: 461 MPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPLMRHR 496


>gi|307822370|ref|ZP_07652602.1| lysyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307736936|gb|EFO07781.1| lysyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 499

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 69/281 (24%), Positives = 118/281 (41%), Gaps = 19/281 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+L+G +   R  G   F  I+D  G  Q+    D+           +W +        
Sbjct: 61  RVKLAGRMMTRRVMGKASFCHIQDMSGQIQLYVTRDALPESFYNEQFKKWDIGDI----- 115

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
             AE +     TG++ +    I +L+ A   PLP        + I+++ R+LDL      
Sbjct: 116 VGAEGVLFKTQTGELSVKIDDIRLLTKALR-PLPEKFHGIADQEIKYRQRYLDLIMSEQS 174

Query: 140 KNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
           +N    R++++  +R  +I  +F+E  TP++        AR F           Y L  A
Sbjct: 175 RNTFLIRSKVVAYIRQFLIERDFLEVETPMMQMIPGGATARPFTTFHNALDMELY-LRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   +   P EF  L+   ++ E  D+++  E +L
Sbjct: 234 PELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMLEFYQAYAEYHDLMDLTEAML 292

Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTD 289
           RGV  E      ++           F R+   D+I  +  D
Sbjct: 293 RGVAVEVLGQTEITYQGEQYDFGKPFDRMTVFDSILHFNPD 333



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 6/156 (3%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           +A   +A+ L I   + +    I     +E   E  ++         P       + ND 
Sbjct: 343 EAAVEVAKNLHIPVKDGYGLGKI-QIEIFEKTVES-RLMNPTFITAYPVEVSPLARRNDD 400

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++    G EIA+G    + +E     F      KE  ++           A +
Sbjct: 401 NPHVTDRFEFFVGGREIANGFTELNDAEDQAARFQKQVEEKEAGDDEAMHFDADYIVALE 460

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GMPP  G   GIDR+VML   A ++R+V LFP  +
Sbjct: 461 HGMPPTAGEGIGIDRLVMLFADAPSIRDVLLFPHMR 496


>gi|238754560|ref|ZP_04615914.1| Lysyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238707191|gb|EEP99554.1| Lysyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 505

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 74/341 (21%), Positives = 138/341 (40%), Gaps = 33/341 (9%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F+ ++D  G  Q+  + D     +      +W L   G ++ 
Sbjct: 67  EVTVAGRMMTRRIMGKASFVTLQDVGGQIQLYVSRDDLPEGVYNEEFKKWDL---GDILG 123

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
              +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL  +   
Sbjct: 124 ARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANDES 180

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
           +N  K R+R+++ +R  M+ + F+E  TP++        AR F+          Y L  A
Sbjct: 181 RNTFKVRSRVMSGIRQFMVEKGFMEVETPMMQVIPGGASARPFITHHNALDIDMY-LRIA 239

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E + 
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELF 298

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
           R + E                   ++ +YG  + D   P     + E          + +
Sbjct: 299 RTLTETILG--------------SSVVKYGEQEFDFGKPFTKLTMKEAICKYRPE--TNV 342

Query: 318 LSVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351
             ++   +  AI         K  G  R  C+   E A S 
Sbjct: 343 ADLDDMDKAVAIAESLGIKIEKSWGLGRVQCEIFEETAESH 383



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 68/203 (33%), Gaps = 21/203 (10%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
                 P  K          R   ++ D D       D     + +   +   +  LG +
Sbjct: 317 EFDFGKPFTKLTMKEAICKYRPETNVADLDDM-----DKAVAIAESLGIKIEKSWGLGRV 371

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
            C  FE               E  +         P       + ND       +++    
Sbjct: 372 QCEIFE------------ETAESHLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIG 419

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGI 543
           G EI +G    + +E   + F+    +K+  ++           A + G+PP  G+  GI
Sbjct: 420 GREIGNGFSELNDAEDQAERFAEQVRAKDEGDDEAMFYDEDYVTALEHGLPPTAGLGIGI 479

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR+VML   +  +R+V LFP  +
Sbjct: 480 DRMVMLFTNSHTIRDVILFPAMR 502


>gi|297582413|ref|YP_003698193.1| lysyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297140870|gb|ADH97627.1| lysyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 503

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 139/375 (37%), Gaps = 30/375 (8%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
            +L   D+   V L G +   R  G   F  ++D  G  Q+    D    E  +      
Sbjct: 52  DELADKDI--KVTLGGRIMTKRGKGKAGFAHVQDLTGQIQIYVRKDQVGDEAYELFTKTD 109

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           +  I G+        +      G++ +     E+L+ +   PLP           R++ R
Sbjct: 110 IGDIVGV------SGVLFKTKVGELSIKVSSFEMLTKSLR-PLPDKYHGLKDVEQRYRQR 162

Query: 130 FLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +   ++  V R++I+ SMR  +    ++E  TP++ A      A+ F+      
Sbjct: 163 YLDLIVNPEVRDTFVLRSKILQSMRRYLDDHGYLEVETPMMHAIPGGASAKPFITHHNAL 222

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
             + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  
Sbjct: 223 DMTLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYH 280

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
           D++   EN++  + ++      V      I  +   RR             M +  +   
Sbjct: 281 DVMALTENLIAHIAQDVLGTTKVHYGDSEIDLEPKWRRLH-----------MVDAIKEET 329

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESG 367
             +F             +   +P K       F   +NE+     +  L    +     G
Sbjct: 330 GVDFWQEMTDEEARDLAKKHGVPHK---DTMKFGHIVNEFFEHFIEEKLIEPTFVY---G 383

Query: 368 NVAGMGPVAKHLNIV 382
           +   + P+AK  +  
Sbjct: 384 HPLDISPLAKKNDED 398



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSI 477
           +A++ G+ + +  +F  I++  F+E   EEK I+     F        S   K ND    
Sbjct: 345 LAKKHGVPHKDTMKFGHIVN-EFFEHFIEEKLIEPT---FVYGHPLDISPLAKKNDEDPR 400

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L   G E A+     +        F    + +E  ++           + + G+
Sbjct: 401 FTDRFELFIVGREHANAFSELNDPVDQRARFEAQLLEREQGDDEAHMMDEDFVESLEYGL 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           PP GG+  GIDR+VMLL  + ++R+V LFP  +N  
Sbjct: 461 PPTGGLGIGIDRLVMLLTNSPSIRDVLLFPQMRNSQ 496


>gi|158319501|ref|YP_001512008.1| lysyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158139700|gb|ABW18012.1| lysyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 495

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 63/303 (20%), Positives = 128/303 (42%), Gaps = 23/303 (7%)

Query: 4   YRTHSCGDL---GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           Y TH    +        G    ++G +   R HG   F++I+D  G  QV    D    E
Sbjct: 36  YVTHYSQQIIEDFEQLEGQNATIAGRIMTKRGHGKASFINIQDKDGQIQVYVREDKIGAE 95

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             +   +  +    G ++    E    N    +I + A ++ +L+ + ++ LP       
Sbjct: 96  DYELFVTYDI----GDIIEIKGEIFKTN--KDEISVRANEVRLLTKSIQI-LPDKWHGLK 148

Query: 121 PESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGAR 178
              +R++ R++DL     + K  V R++ I +++  +    ++E  TPIL T +    AR
Sbjct: 149 DHDLRYRQRYVDLIVNPEVKKTFVTRSKAIKAIKEFLDNRGYLEVETPILGTLAGGANAR 208

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+          Y L  A + + + L+  GFD+ +++   FR+E       P EF  ++
Sbjct: 209 PFITHHNTLDIDMY-LRIANELFLKRLIVGGFDKVYEMGRMFRNEGMSIKHNP-EFTSIE 266

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTD 289
           +  ++ + +D+++  EN++    E+      ++           + R+   +A R+Y   
Sbjct: 267 LYEAYADYNDMMDITENIVAYAAEKALGTTKINYQGQEIDLTPPWNRMTMVEACRKYANV 326

Query: 290 KPD 292
             D
Sbjct: 327 DFD 329



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           EK +         P       K N        +++   N +EIA+     +        F
Sbjct: 367 EKHLIQPTFITQHPVEISPLAKRNPEDPAFTNRFEAFINTWEIANAFSELNDPIDQRGRF 426

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +    +E  ++           A + G+PP GG+  GIDR++ML+  + ++R+V LFP 
Sbjct: 427 MDQLEQREAGDDEAHVLDEDFLNAIEVGLPPTGGLGIGIDRLMMLITNSPSIRDVLLFPT 486

Query: 565 SQ 566
            +
Sbjct: 487 MK 488


>gi|251792905|ref|YP_003007631.1| lysyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534298|gb|ACS97544.1| lysyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 502

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 67/287 (23%), Positives = 123/287 (42%), Gaps = 21/287 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L    +   V ++G +   R  G   F+ ++D  G  Q+    D+    + K     W L
Sbjct: 57  LKEKHI--EVAVAGRIMTRRAMGKATFITLQDMSGRIQLYVARDNLPEGVYKEDVGAWDL 114

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++            T ++ + A ++++L+ A   PLP        + +R++ R+L
Sbjct: 115 ---GDIVGVKGTLF--KTKTNELTVKATEVQLLTKALR-PLPNKFHGLTDQEVRYRQRYL 168

Query: 132 DLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +    +  + R++++  +R   I++ F+E  TP+L        AR F+        
Sbjct: 169 DLIANEDSRRTFMIRSQVVAGIREYFISKGFMEVETPMLQVIPGGAAARPFVTHHNALDV 228

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+
Sbjct: 229 DMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDL 286

Query: 250 LNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYG 287
           ++  E +LR +  +      V            F RI   DA  +YG
Sbjct: 287 MDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYG 333



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 65/180 (36%), Gaps = 12/180 (6%)

Query: 396 GDSCFFIAGDPLKFCSFAADARNH--IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            D+      +         D       A+ LGI     +    I++   +E   E   I 
Sbjct: 326 HDATIKYGAEKGIVKEDLYDLERAKAAAKRLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQ 384

Query: 454 FAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                F M      S     ND       +++L   G EI +G    + +E   + F   
Sbjct: 385 PT---FLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQ 441

Query: 512 GISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 442 VAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|227540939|ref|ZP_03970988.1| lysyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227183199|gb|EEI64171.1| lysyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 514

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 106/559 (18%), Positives = 192/559 (34%), Gaps = 124/559 (22%)

Query: 16  DVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           +VG      V ++G V   R  G + F  ++   G          +  E+ +     W  
Sbjct: 64  EVGEETDIVVSVAGRVIFFRNTGKLCFAKLQAGSG---ASVQAMISLAEVGEESLKNWKA 120

Query: 72  CID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            +D G ++S +   I++    G++ + A   ++ S A          +E  E  R ++R+
Sbjct: 121 DVDLGDIISVTGRVISSK--RGELSVMATDWQMASKALRPLP--VAHKEMSEDQRIRHRY 176

Query: 131 LDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
            DL  R+   KN + R +++ ++R  + +E F+E  TP+L        AR F+  S    
Sbjct: 177 TDLIMREEARKNALTRIKVMRALRNFLESEGFLEVETPMLQTLHGGAAARPFVTHSNAMD 236

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  AP+ + +  +  G +R F++   FR+E   S   P EF  L+   ++ + + 
Sbjct: 237 MDLY-LRIAPELFLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFAMLETYQAWGDYNT 294

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
             + ++ +++ V  E     T                           + + + TE+   
Sbjct: 295 GADLIKRLIQSVATEVFGSTT---------------------------VTLVDGTEYDFG 327

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
            E++      S+N                R F           GQP              
Sbjct: 328 GEWKTLEMYPSLNE------------ALARKF----------PGQP-------------E 352

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           V     V         EAI   + ++ G    +  G  ++           I +   +  
Sbjct: 353 VTIDSSV------EELEAIADHIGLEKG--KGWGHGKFVE----------EIWE--FLCE 392

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              +   ++ DFP               +P T                    ++DL   G
Sbjct: 393 DQLYGPVFVRDFP------------VETSPLTRQHRS---------KPGVTEKWDLYVRG 431

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           FE+A+G        +  + F +         +           A +  MPP  G   GID
Sbjct: 432 FELATGYSELVDPVIQRERFEDQARLAAGGDDEAMELDEDFLFAMEQAMPPTSGNGMGID 491

Query: 545 RIVMLLLGAKNVREVSLFP 563
           R++M L G   +RE  LFP
Sbjct: 492 RLLMALTGLG-IRETVLFP 509


>gi|144208|gb|AAA23029.1| transfer RNA-Lys synthetase [Campylobacter jejuni]
          Length = 501

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 99/550 (18%), Positives = 191/550 (34%), Gaps = 122/550 (22%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +  +R  G  IF +I D     Q+  + DS   E+   ++    L +  +V+   
Sbjct: 59  VVAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKN--LEVGDIVL--- 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
            +       TG+  L A ++++ + A  +PLP           R++ R++D+  +  + K
Sbjct: 114 VKGFPFVTKTGEFSLHASEVKLATKA-IVPLPEKYHGLTDIEQRYRKRYVDMIMNVEVRK 172

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           + + R+++++ +R     + F+E  TP++   +        V    + G    L  AP+ 
Sbjct: 173 DFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPEL 232

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF+  F+I  CFR+E                          ++   N     
Sbjct: 233 YLKRLIVGGFEAVFEINRCFRNEG-------------------------MDLTHN----- 262

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
                        F  I +  A   Y            + ++TE        +F+ +L  
Sbjct: 263 -----------PEFTTIEFYWAYHNYKD----------LMDLTEE-------LFALLLDK 294

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
               +      K    ++ F                     R+     +   G + + L 
Sbjct: 295 LNLGKTIEFDGKMINFSKPFE--------------------RITYKDALCKYGGLDRDL- 333

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
           I + E I  +L         F A + L+        +  +      +        +++DF
Sbjct: 334 IEDKEKILTKLKAD-----GFEANEKLE----LGHLQAELFD--NYVEEKLINPTFVIDF 382

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P             + +P +        +         A +++L   G E+A+G    + 
Sbjct: 383 P------------ISISPLSRRSDEDSQI---------AERFELFICGRELANGFNELND 421

Query: 501 SEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                + F     +K   +            A   GMPP  G   GIDR+VMLL   K++
Sbjct: 422 PLDQYERFLKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKSI 481

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 482 RDVILFPAMR 491


>gi|85059967|ref|YP_455669.1| lysyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123766398|sp|Q2NRG1|SYK_SODGM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|84780487|dbj|BAE75264.1| lysyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 506

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 69/295 (23%), Positives = 123/295 (41%), Gaps = 21/295 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RY   S  +L   ++   V ++G +   R  G   F  ++D  G  Q+    D       
Sbjct: 53  RYGEKSNEELEALNI--EVSIAGRMMTRRIMGKASFATLQDVGGKIQLYVARDDLPEGQY 110

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
                +W L   G ++    +       TG++ +   +I +L+ A   PLP        +
Sbjct: 111 NEQFKKWDL---GDILGTRGKLF--KTRTGELSVHCSEIRLLTKA-MRPLPDKFHGLADQ 164

Query: 123 SIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
             R++ R+LDL   D   +    R+RI+  +R  M+  +F+E  TP++ T      AR F
Sbjct: 165 ETRYRQRYLDLIANDESRQTFKVRSRIMAEIRRFMMDNDFMEVETPMMQTIPGGAAARPF 224

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ 
Sbjct: 225 ITHHNALGIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNPEFTMMELY 282

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSN---------GNTVSNNFLRICYDDAIRRY 286
           M++ +  D++  +E + R + +                    F ++   +AI  Y
Sbjct: 283 MAYADYRDLIVLVETLFRTLTQRVLGSSVVHNGDQTFDFGKPFTQMTMKEAICHY 337



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 7/126 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           +E   E   I       T     +  L + ND       +++    G EI +G    + +
Sbjct: 377 FEETAESHLIQPTF--ITAYPAEVSPLARRNDDNPFFTDRFEFFIGGREIGNGFSELNDA 434

Query: 502 EVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F+    +K+  ++           A + G+PP  G+  GIDR++MLL  +  +R
Sbjct: 435 EDQAARFAEQAQAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRLMMLLTNSHTIR 494

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 495 DVILFP 500


>gi|83589024|ref|YP_429033.1| lysyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|123739358|sp|Q2RM49|SYK_MOOTA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|83571938|gb|ABC18490.1| lysyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 489

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 65/303 (21%), Positives = 125/303 (41%), Gaps = 24/303 (7%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           THS   +        G  V L+G +  +R HG   F D++D  G  Q+    D+    I 
Sbjct: 35  THSTTAIRERFDELEGQEVALAGRLLAIRSHGKASFADLQDREGRLQLYIRLDNVGPGIY 94

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  +   +  I G+               G+I +  +++ +L  +   PLP         
Sbjct: 95  ELFQKLDIGDIVGV------RGKVFRTHRGEISVEVRQLTLLCKSLR-PLPEKWHGLKDV 147

Query: 123 SIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
            +R++ R+LDL     + +  + R RII ++R  +    F+E  TP +   +    AR F
Sbjct: 148 DLRYRQRYLDLIVNPEVKQVFITRARIIRAIRSFLDNRGFLEVETPTMHPIAGGAAARPF 207

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + + + L+  G ++ +++   FR+E   +   P EF  L++ 
Sbjct: 208 ITHHNALDIDLY-LRIALELHLKRLLVGGLEKVYEMGRIFRNEGISTKHNP-EFTMLELY 265

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI-RRYGTDK 290
            ++ +   +++ +E ++  V  E      V+           + R+   +AI + YG D 
Sbjct: 266 QAYADYYVMMDLLEEMVAYVAREALGTTVVTYQGDRLDLTPPWPRLTMLEAIKKYYGVDF 325

Query: 291 PDL 293
             L
Sbjct: 326 DQL 328



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 63/183 (34%), Gaps = 34/183 (18%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE---------FCWIMDFPFYEWNE 447
           D       +  +  + +         E G I    FE           +I+D+P      
Sbjct: 324 DFDQLPTAEDARRAAISLGLEIEPGMERGKIINEVFEATVEPHLIQPTFILDYP------ 377

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
                  A +P    +                ++++    G E+A+     +      + 
Sbjct: 378 ------VAISPLAKRKKENPDF---------TYRFEAFIAGRELANAFSELNDPIDQRRR 422

Query: 508 FSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           F      +   +           +A + GMPP GG+  GIDR+VM+L  + ++R+V LFP
Sbjct: 423 FEAQMAERAAGDEEAHMMDEDFLQALEYGMPPAGGMGIGIDRLVMVLTDSPSIRDVILFP 482

Query: 564 MSQ 566
             +
Sbjct: 483 TMR 485


>gi|229094798|ref|ZP_04225804.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228688666|gb|EEL42538.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 499

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 60/312 (19%), Positives = 124/312 (39%), Gaps = 20/312 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   ++   V ++G +   R  G   F  I+D +G  Q+    D+   E  +   +  +
Sbjct: 55  ELEEKEI--TVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDTVGDEEYELFTTADL 112

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               G ++    +    N+  G++ + A    +L+ +   PLP           R++ R+
Sbjct: 113 ----GDLVGIEGKVFKTNV--GELSVKATGFTLLTKSLR-PLPDKYHGLKDVEQRYRQRY 165

Query: 131 LDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQ 188
           LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F        
Sbjct: 166 LDLITSIESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFTTHHNALD 225

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + +D
Sbjct: 226 MELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYND 283

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPIIMHN 301
           I+   EN++  + ++     T+      I  +    R             D  NP+ +  
Sbjct: 284 IMKLTENMVAHIAKKVLGTTTIQYGDYEINLEPEWTRLHMVDAIKQHSGADFWNPMSVEE 343

Query: 302 VTEHFVHSEFRV 313
             E        +
Sbjct: 344 ARELAKEHNVEI 355



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   +  E   I++  F+E   E+K I      +  P       K ND    
Sbjct: 345 RELAKEHNVEIKDTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDEDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|116871612|ref|YP_848393.1| lysyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123460668|sp|A0AF28|SYK_LISW6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116740490|emb|CAK19610.1| lysyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 498

 Score =  208 bits (529), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 144/373 (38%), Gaps = 28/373 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +    V ++G +   R  G + F  I+D +   Q+    D+   +     +   +  I
Sbjct: 56  LEEAAIEVSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAIFKLADLGDI 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      +       TG++ + A    +LS +   PLP           R++ R+LDL
Sbjct: 116 IGI------KGTIFRTNTGELSVKATDFTLLSKSLR-PLPDKYHGLKDVEQRYRQRYLDL 168

Query: 134 RRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +       V R++I+   R  M ++ F+E  TP+L T +    A+ F+          
Sbjct: 169 ITNEESQNRFVMRSKILKYTRDYMDSQGFLEVETPVLHTIAGGAAAKPFITHHNALDMEL 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++
Sbjct: 229 Y-LRIALELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMD 286

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +E ++  V ++ +              +     Y  D       + M +V + +V  + 
Sbjct: 287 LVEGLVSTVCKQVNG-----------TTEITYGEYKVDLTPNWRRVHMADVVKEYVGVD- 334

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
             F  + S     E+          +  +   +NE+  +  +  L    +     G+   
Sbjct: 335 --FWNVTSDEEARELAKKHDVAITEHMTYGHILNEFFETYVEEKLIQPTFVY---GHPVE 389

Query: 372 MGPVAKHLNIVNT 384
           + P+AK       
Sbjct: 390 ISPLAKKNKEDER 402



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + K  +       +++L   G E A+     +  
Sbjct: 368 FFETYVEEKLIQPTFVYGHPVEISPLAKKNKEDERF-TDRFELFIVGREHANAFSELNDP 426

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +   G       A + G+PP GG+  G+DR+VMLL  A ++R
Sbjct: 427 IDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGVDRLVMLLTDAPSIR 486

Query: 558 EVSLFPMSQNF 568
           ++ LFP  ++ 
Sbjct: 487 DILLFPTMKHR 497


>gi|315274625|ref|ZP_07869480.1| lysyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313615745|gb|EFR89018.1| lysyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 498

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 143/373 (38%), Gaps = 28/373 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +    V ++G +   R  G + F  I+D +   Q+    D+   +     +   +  I
Sbjct: 56  LEEAAIEVSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAIFKLADLGDI 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      +       TG++ + A +  +LS +   PLP           R++ R+LDL
Sbjct: 116 IGI------KGTIFRTNTGELSVKATEFTLLSKSLR-PLPDKYHGLKDVEQRYRQRYLDL 168

Query: 134 RRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +       V R++I+   R  M  + F+E  TP+L T +    A+ F+          
Sbjct: 169 ITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMEL 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++
Sbjct: 229 Y-LRIALELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMD 286

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +E ++  V ++ +              +     Y  D       I M +  + +V  +F
Sbjct: 287 LVEGLVSTVCKQVNG-----------TTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDF 335

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
              +         +   +P      +  +   +NE+  +  +  L    +     G+   
Sbjct: 336 WNVTSDEEARELAKKHDVPV---TEHMTYGHILNEFFETYVEEKLIQPTFVY---GHPVE 389

Query: 372 MGPVAKHLNIVNT 384
           + P+AK       
Sbjct: 390 ISPLAKKNKEDER 402



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + K  +       +++L   G E A+     +  
Sbjct: 368 FFETYVEEKLIQPTFVYGHPVEISPLAKKNKEDERF-TDRFELFIVGREHANAFSELNDP 426

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +   G       A + G+PP GG+  GIDR+VMLL  A ++R
Sbjct: 427 IDQRERFEAQIKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIR 486

Query: 558 EVSLFPMSQNF 568
           ++ LFP  ++ 
Sbjct: 487 DILLFPTMKHR 497


>gi|152973925|ref|YP_001373442.1| lysyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|189082695|sp|A7GJY9|SYK_BACCN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|152022677|gb|ABS20447.1| lysyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 499

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 64/330 (19%), Positives = 132/330 (40%), Gaps = 32/330 (9%)

Query: 5   RTHSCGDL-------GVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTHS  +L          ++      V ++G +   R  G   F  I+D +G  Q+    
Sbjct: 37  RTHSSKELLNLYGEFSKEELEEKAISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  ++  +    G ++    +    N+  G++ + A    +L+ +   PLP 
Sbjct: 97  DAVGDEEYELFKTADL----GDLVGIEGKVFKTNV--GELSVKATSFTLLTKSLR-PLPD 149

Query: 115 FGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                     R++ R+LDL       +  V R++II  MR  +    ++E  TP++   +
Sbjct: 150 KYHGLKDIEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHTIA 209

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 210 GGASARPFITHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  +++  ++ +  DI+   EN++  + +      T+            + R+   DAI
Sbjct: 268 EFTMIELYEAYADYKDIMKLTENMIAHIAKRVLGTTTIQYGEHEINLEPEWTRLHMVDAI 327

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           ++Y     D   P+ +          +  +
Sbjct: 328 KQY--CGVDFWKPMSVEEARALAKEHDVEI 355



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   +  E   I++  F+E   EEK I      +  P       K ND  S 
Sbjct: 345 RALAKEHDVEIKDTMEVGHIIN-EFFEQKVEEKLIQPT-FIYGHPVEISPLAKKNDEDSR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  + ++R+V LFP  ++  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNSPSIRDVLLFPTMRHKQD 499


>gi|229153855|ref|ZP_04281986.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228629659|gb|EEK86355.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 499

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 60/316 (18%), Positives = 126/316 (39%), Gaps = 21/316 (6%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G+    ++      V ++G +   R  G   F  I+D +G  Q+    D+   E  +  +
Sbjct: 49  GEFSKEELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +    G ++    +    N+  G++ + A    +L+ +   PLP           R+
Sbjct: 109 TADL----GDLVGIEGKIFKTNV--GELSVKATGFTLLTKSLR-PLPDKYHGLKDVEQRY 161

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F+   
Sbjct: 162 RQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ 
Sbjct: 222 NALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYA 279

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPI 297
           +  DI+   EN++  + ++     T+      I  +    R             D  NP+
Sbjct: 280 DYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWTRLHMVDAIKEHSGADFWNPM 339

Query: 298 IMHNVTEHFVHSEFRV 313
            + +  E        +
Sbjct: 340 SVEDARELAKEHNVEI 355



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 7/160 (4%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           DAR  +A+E  +   +  E   I++  F+E   E+K I      +  P       K ND 
Sbjct: 343 DAR-ELAKEHNVEIKDTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDE 399

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++L     E A+     +      + F      +E   +           A +
Sbjct: 400 DPRFTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALE 459

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GMPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 460 YGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|256374484|ref|YP_003098144.1| lysyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255918787|gb|ACU34298.1| lysyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 503

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 103/574 (17%), Positives = 192/574 (33%), Gaps = 134/574 (23%)

Query: 5   RTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  ++  +  G          V ++G V  +R  G + F  +R+  G          
Sbjct: 44  RTHSLREVREAHTGLDPDTGTGEVVGVTGRVMFIRNTGKLAFATLREGDGT---ELQAML 100

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +  ++ +   ++W   +D G  +    E I +    G++ + A +  I + A        
Sbjct: 101 SLNKVGEQALADWKSDVDLGDHVFVRGEVITSR--RGELSVMADEWAITAKALRPLP--V 156

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL      ++ V+ R +++ S+R       F E  TP+L     
Sbjct: 157 AHKELAEETRIRQRYVDLILREQARDTVRNRAKLVRSLRESFHRRGFTEVETPMLQTLQG 216

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       + L  AP+ Y +  +  G ++ F+I   FR+E   S   P E
Sbjct: 217 GAAARPFVTRSNALDIDLF-LRIAPELYLKRCVVGGIEKVFEINRNFRNEGIDSSHSP-E 274

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  L+                       E ++  +T +     +  + A+   G+     
Sbjct: 275 FSMLEYY---------------------EAYATYDTNAVMTRELIQEAAMAVAGSHV--- 310

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
              + + + TE+ +  E+   +   S                        ++E A  +  
Sbjct: 311 ---VTLVDGTEYDLGGEWTTLTMYGS------------------------LSEAAGVEVT 343

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
           PG                        ++ +  A+  +L ++                   
Sbjct: 344 PG-----------------------TSVDDLRALADKLGLETDPKLGH------------ 368

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                 + + L  +  +     ++ DFP               +P T             
Sbjct: 369 GKLVEELWEHL--VGDHLHAPTFVRDFP------------VETSPLTRQHRS-------- 406

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMS----EVMLQAFSNVGISKEVVENRFGGLYRAF 529
                A ++DL   GFE+A+G           E +                      R+ 
Sbjct: 407 -TPGVAEKWDLYVRGFELATGYSELVDPVVERERLEAQARLGASGDVEAMPVDEDFLRSL 465

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + GMPP GG+  GIDR++M + G   +RE  LFP
Sbjct: 466 EYGMPPSGGVGMGIDRLLMAITGLG-IRETILFP 498


>gi|57237456|ref|YP_178469.1| lysyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|81354013|sp|Q5HW66|SYK_CAMJR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|57166260|gb|AAW35039.1| lysyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315057824|gb|ADT72153.1| Lysyl-tRNA synthetase (class II) [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 501

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 100/550 (18%), Positives = 193/550 (35%), Gaps = 122/550 (22%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +  +R  G  IF +I D     Q+  + DS   E+   ++    L +  +V+   
Sbjct: 59  VVAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKN--LEVGDIVL--- 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
            +       TG+  L A ++++ + A  +PLP           R++ R++D+  +  + K
Sbjct: 114 VKGFPFVTKTGEFSLHASEVKLATKA-IVPLPEKYHGLTDIEQRYRKRYVDMIMNAEVRK 172

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           + + R+++++ +R     + F+E  TP++   +        V    + G    L  AP+ 
Sbjct: 173 DFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPEL 232

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF+  F+I  CFR+E                          ++   N     
Sbjct: 233 YLKRLVVGGFEAVFEINRCFRNEG-------------------------MDLTHN----- 262

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
                        F  I +  A   Y            + ++TE             L +
Sbjct: 263 -----------PEFTTIEFYWAYHNYKD----------LMDLTEELF---------ALLL 292

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
           +       I   G         +M ++++          F R+     +   G + + L 
Sbjct: 293 DKLNLGKTIEFDG---------KMIDFSKP---------FERITYKDALCKYGGLDRDL- 333

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
           I + E I  +L         F A + L+        +  +      +        +++DF
Sbjct: 334 IEDKEKILTKLKAD-----GFEANEKLE----LGHLQAELFD--NYVEEKLINPTFVIDF 382

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P             + +P +        +         A +++L   G E+A+G    + 
Sbjct: 383 P------------ISISPLSRRSDEDSQI---------AERFELFICGRELANGFNELND 421

Query: 501 SEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                + F     +K   +            A   GMPP  G   GIDR+VMLL   K++
Sbjct: 422 PLDQYERFLKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKSI 481

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 482 RDVILFPAMR 491


>gi|304440039|ref|ZP_07399932.1| lysine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371531|gb|EFM25144.1| lysine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 633

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 66/300 (22%), Positives = 134/300 (44%), Gaps = 26/300 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGL 76
             V ++G +   R HG I FLD++D  G  Q+    D  +  +++ K +    ++ + G 
Sbjct: 53  KDVVVAGRIMSKRRHGKIAFLDLQDSRGTIQIFLRKDVMNEGYDVIKDIDIGDIVGVKGK 112

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V    A         G+I + A +  +LS + ++ LP          +R++ R++DL  +
Sbjct: 113 VFKTEA---------GEITVRATEASLLSKSLQI-LPEKFHGLKDIELRYRMRYVDLIVN 162

Query: 137 TLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYAL 194
              K+  +KR++II +++  +    F+E  TPIL + +    A+ FL            +
Sbjct: 163 PEVKDVFIKRSKIIKAIKEYLDERGFLEVETPILGSVAGGANAKPFLTHHNTLDMDM-QM 221

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + Y + L+  GFD+ +++   FR+E   S R   EF  +++  ++V+ ++++   E
Sbjct: 222 RIANELYLKRLIVGGFDKVYELGKMFRNEGI-SPRHNPEFTNIELYQAYVDYEEMMRITE 280

Query: 255 NVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKPDLRNPIIMHNVTE 304
            +   V ++      ++           + RI   DAI  Y G D  ++        + +
Sbjct: 281 GIFEYVAKKVLGTTKINYQGKEIELKAPWRRITMIDAINEYAGVDFNEINTDEEAREIAK 340



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 7/130 (5%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHM 500
            +E   E   +       T     +  L   D    +   +++   N +E+A+     + 
Sbjct: 359 MFEEFCESHLVQPTF--VTKHPVEVSPLAKRDPEDPRLTQRFEAFMNTWELANAFSELND 416

Query: 501 SEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                + F      KE+ ++           A + G+PP GG+  G+DR++M+LL    +
Sbjct: 417 PIDQRERFEEQLREKEMGDDEAHPMDTDFLNAIEVGLPPTGGLGIGVDRMIMILLDQPTI 476

Query: 557 REVSLFPMSQ 566
           R++  FP  +
Sbjct: 477 RDIIFFPTMK 486


>gi|58582495|ref|YP_201511.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58427089|gb|AAW76126.1| lysyl-tRNA synthetase heat inducible [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 528

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 67/302 (22%), Positives = 120/302 (39%), Gaps = 25/302 (8%)

Query: 5   RTHSCGDLGVSDV-------------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL                  G  V+++G +   R  G   F  I+D  G  Q+ 
Sbjct: 64  REHFAGDLQAEFADADTWTPDALEASGRTVKMAGRLMAKRVMGKASFAQIQDESGRVQLF 123

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              +           + +     G +++           TG++ + A  + +L+ +   P
Sbjct: 124 LQGNVLG-----DAYTAFKGWDVGDIVAVEGGL--TRTKTGELSVKASALRLLTKSLR-P 175

Query: 112 LPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP           R++ R++DL       +  +KR++II +MR  + A  F+E  TP++ 
Sbjct: 176 LPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPMMH 235

Query: 171 -ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   +  
Sbjct: 236 YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRH 294

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  L++  ++    +I++  E V+R   +       VS +   I    A RR+  D
Sbjct: 295 NP-EFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFRRWRMD 353

Query: 290 KP 291
           + 
Sbjct: 354 EA 355



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           + +D       +++L  NG E+A+G    +  E     F     +K+  ++         
Sbjct: 425 RSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMHFDADY 484

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GMPP GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 485 IRALEYGMPPTGGLGIGIDRLVMLLTGSTSIRDVLLFP 522


>gi|311278190|ref|YP_003940421.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308747385|gb|ADO47137.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 506

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 76/364 (20%), Positives = 136/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L           +  +   V ++G +   R  G   F+ ++D  G  Q+ A  
Sbjct: 43  RDHTSDQLHSEFDAKENEELESLNVEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYAAR 102

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G +++   +       TG++ +   ++ +L+ A   PLP 
Sbjct: 103 DDLPEGVYNDQFKKWDL---GDIIAARGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 156

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL   D        R++I+  MR  M+   F+E  TP++    
Sbjct: 157 KFHGLQDQEARYRQRYLDLIANDESRNTFKIRSQILAGMRKFMVGRGFMEVETPMMQVIP 216

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 217 GGASARPFITHHNALDMDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 274

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V               YG    D
Sbjct: 275 EFTMMELYMAYADYKDLIELTESLFRTLAQDVLGKTEVP--------------YGEHTFD 320

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEW 347
              P +   + E             L      +  A        K  G  R   +  +E 
Sbjct: 321 FGKPFVKLTMREAIKKYRPETNMADLDNFDAAKAIAESIGIHVEKSWGLGRIVTEIFDEV 380

Query: 348 ARSQ 351
           A + 
Sbjct: 381 AEAH 384



 Score = 90.9 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 68/194 (35%), Gaps = 21/194 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   +M D D+      D  K  + +       +  LG I    F+
Sbjct: 324 PFVKLTMREAIKKYRPETNMADLDNF-----DAAKAIAESIGIHVEKSWGLGRIVTEIFD 378

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 379 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 426

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F +   +K   ++           A + G+PP  G+  GIDR+VML
Sbjct: 427 GFSELNDAEDQAQRFLDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 486

Query: 550 LLGAKNVREVSLFP 563
              +  +R+V LFP
Sbjct: 487 FTNSHTIRDVILFP 500


>gi|224456425|ref|ZP_03664898.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158489|gb|ADA77880.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 560

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 70/300 (23%), Positives = 129/300 (43%), Gaps = 17/300 (5%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV            
Sbjct: 106 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPDGQY 165

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++ ++   LC  G ++  +      N  TG++ + A   EIL+ A   PLP        +
Sbjct: 166 ETFKN---LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHGLADQ 219

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +   + + K R++++N +R      +F+E  TP++      GA    
Sbjct: 220 EMRYRQRYVDLITNEKAREVFKVRSKVVNFIRNYFDRLDFMEVETPMMHVLQGGGAAKPF 279

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  L+  M
Sbjct: 280 KTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTMLEFYM 338

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPD 292
           ++ + +D+++  E++L  + +E      +            + RI   D+I +Y  D   
Sbjct: 339 AYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYNDDITK 398



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 106/337 (31%), Gaps = 44/337 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---- 298
           + ++ D +     ++         G   +  F        +  Y    P+L    +    
Sbjct: 253 YFDRLDFMEVETPMMH-----VLQGGGAAKPFKTHHNALDMPLYLRIAPELYLKRLVVGG 307

Query: 299 MHNVTEHFVH-SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQPGL 356
              V E   +     V S+        E +   A          D +++  +   G   L
Sbjct: 308 FERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEIL 367

Query: 357 AYIFWRLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            Y  ++++  G    +     + K+ + +  E +      +            ++     
Sbjct: 368 EYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKK---IAEKLKIKVEAYHEL 424

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               N I +E   +     +  +I D+P               +P    Q G        
Sbjct: 425 GHLINEIFEE--TVEHQLIQPTFITDYP------------AVVSPLARRQDGNPEFTD-- 468

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  +++      E+A+G    + +E   + F     +     +          RA 
Sbjct: 469 -------RFEFFIGAREVANGFSELNDAEDQAERFRKQVEAAASGDDEAMPYDKDYIRAL 521

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP  G   GIDR+VM L  ++++R+V LFP  +
Sbjct: 522 EYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFPHMK 558


>gi|47093173|ref|ZP_00230948.1| lysyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|47018480|gb|EAL09238.1| lysyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|328467946|gb|EGF38976.1| lysyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 498

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 144/373 (38%), Gaps = 28/373 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +    V ++G +   R  G + F  I+D +   Q+    D+   +     +   +  I
Sbjct: 56  LEEAAIEVSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKLADLGDI 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      +       TG++ + A +  +LS +   PLP           R++ R+LDL
Sbjct: 116 IGI------KGTIFRTNTGELSVKATEFTLLSKSLR-PLPDKYHGLKDVEQRYRQRYLDL 168

Query: 134 RRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +       V R++I+   R  M  + F+E  TP+L T +    A+ F+          
Sbjct: 169 ITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMEL 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++
Sbjct: 229 Y-LRIALELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMD 286

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +E ++  V ++ +              +     Y  D       I M +  + +V  +F
Sbjct: 287 LVEGLVSTVCKQVNG-----------TTEITYGEYNVDLTPNWRRIHMADAVKEYVGVDF 335

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
              +         +   +P      +  +   +NE+  +  +  L    +     G+   
Sbjct: 336 WNVTSDEEARELAKKHNVPV---TEHMTYGHILNEFFETYVEEKLIQPTFVY---GHPVE 389

Query: 372 MGPVAKHLNIVNT 384
           + P+AK     + 
Sbjct: 390 ISPLAKKNKEDDR 402



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + K  +       +++L   G E A+     +  
Sbjct: 368 FFETYVEEKLIQPTFVYGHPVEISPLAKKNKEDDRF-TDRFELFIVGREHANAFSELNDP 426

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +   G       A + G+PP GG+  GIDR+VMLL  A ++R
Sbjct: 427 IDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIR 486

Query: 558 EVSLFPMSQNF 568
           ++ LFP  +  
Sbjct: 487 DILLFPTMKRR 497


>gi|320450006|ref|YP_004202102.1| lysyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320150175|gb|ADW21553.1| lysyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 491

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 66/295 (22%), Positives = 120/295 (40%), Gaps = 24/295 (8%)

Query: 2   HRY-RTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           +RY +THS  ++  +  G          V L+G +  +R  G + F  + D  G  Q+  
Sbjct: 25  YRYPKTHSAKEILSAKEGAPPESEWEEEVALAGRIVALRRMGKVTFAHLLDESGKIQLYF 84

Query: 53  NPD-SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
             D +  +E+ K +    +L + G V             TG++ +       L  +   P
Sbjct: 85  QKDLTPSYELLKKLDVGDILGVKGTV---------FTTKTGEVTVKVLSWTPLVKSL-HP 134

Query: 112 LPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP        + +R++ R+LDL     + +   +RT ++  +R       F+E  TPIL 
Sbjct: 135 LPDKWHGIKDKEVRYRQRYLDLIVNPEVREVFRRRTAMVRYIRRFFEERGFLEVETPILQ 194

Query: 171 ASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
            ++    AR F          FY L  + + Y + L+  GF++ F+I   FR+E    + 
Sbjct: 195 PTTGGAEARPFKTYHNALDHEFY-LRISLELYLKRLLVGGFEKVFEIGRNFRNEGIDHNH 253

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            P EF  L+   ++ +  D+   +E +L G+         V      + +    R
Sbjct: 254 NP-EFTMLEAYWAYADYQDMAKLVEELLSGLVLHLFGSYQVPYQGRVLDFTPPFR 307



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 51/149 (34%), Gaps = 25/149 (16%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +        ++ DFP             A +P          L           ++DL  
Sbjct: 359 VEPELQNPTFVFDFPL------------AISPLAKRHREKPGL---------TERWDLYA 397

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAG 542
            G E+A      +      + F      +   +            A + GMPP  G+  G
Sbjct: 398 GGMELAPAYSELNDPLDQRERFLEQARRRREGDEEAPEPDEDFLLALEYGMPPAAGLGLG 457

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +DR+ M+L    ++R+V LFP+ +   +L
Sbjct: 458 LDRLAMILTDQPSLRDVLLFPLLKPKREL 486


>gi|222445531|ref|ZP_03608046.1| hypothetical protein METSMIALI_01171 [Methanobrevibacter smithii
           DSM 2375]
 gi|261349911|ref|ZP_05975328.1| aspartate--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|222435096|gb|EEE42261.1| hypothetical protein METSMIALI_01171 [Methanobrevibacter smithii
           DSM 2375]
 gi|288860694|gb|EFC92992.1| aspartate--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 439

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 154/352 (43%), Gaps = 25/352 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RT+   ++     G  V + GWVH +R  GGIIF+ IRD  G  Q+ A     D+   E 
Sbjct: 10  RTNYTKNVTPDLTGQDVIVMGWVHEIRDLGGIIFVIIRDREGKVQITAPSKKVDAEILED 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
            + +R E V+ I G V         AN     +E+  ++I +L++A +  P+    + + 
Sbjct: 70  IRKLRKESVVAIKGTVQE-------ANQAPTGVEIIPKEINLLNLANQPLPMDPTDKVKA 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RF+DLRRD +      + R+ +++R       F+E +TP L AS+ EG  + 
Sbjct: 123 EIDTRLDSRFIDLRRDNVSAIFKIKNRMFHTVRDFFYENGFMEINTPKLVASATEGGTEL 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F  L Q+PQ YKQ++M+SG D+ F+I   FR E+  + R   E   +D E
Sbjct: 183 FPITYFEKEAF--LGQSPQLYKQMMMSSGMDKVFEIGQIFRAEEHDTLRHLNEAVSIDAE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAIRRYGT 288
            SF++  D++  + N+L  V  + +                    F  + YD+A+    +
Sbjct: 241 ASFMDDIDVMKILNNMLEQVIIDINEDCKEELNILEHEMPVPDGPFPVVTYDEAVDIVNS 300

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
              ++     +    E  +      F  +       + + +        +A 
Sbjct: 301 RDVEMSWGEDLSRAGEKALGDVMGGFYFLTEWPSEIKPFYVMPNSKDPTKAH 352



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 74/195 (37%), Gaps = 30/195 (15%)

Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE-----FCW 436
                +   + + DG        + +   +   D      ++L              F +
Sbjct: 270 EELNILEHEMPVPDGPFPVVTYDEAVDIVNSR-DVEMSWGEDLSRAGEKALGDVMGGFYF 328

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           + ++P                PF +     +          KA  +DL+ N  E++SG  
Sbjct: 329 LTEWP------------SEIKPFYVMPNSKDP--------TKAHAFDLMYNNLELSSGAT 368

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  +V+++     G++       FG   +AF+ GMPPH G   G DR+ M+L G +N+
Sbjct: 369 RVHQYDVLVKQIEEKGLNV----ASFGSYLKAFEYGMPPHAGWGVGADRLAMVLTGVENI 424

Query: 557 REVSLFPMSQNFCDL 571
           RE  LFP  ++    
Sbjct: 425 RETVLFPRDRHRLTP 439


>gi|21228018|ref|NP_633940.1| lysyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|39932430|sp|Q8PVP6|SYK2_METMA RecName: Full=Lysyl-tRNA synthetase 2; AltName: Full=Lysine--tRNA
           ligase 2; Short=LysRS 2
 gi|20906448|gb|AAM31612.1| Lysyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 511

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 98/559 (17%), Positives = 181/559 (32%), Gaps = 122/559 (21%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             + G  VR +G ++ +R HG +IF D+ D  G  QV+    +   E  +  ++   L  
Sbjct: 68  EKNEGLTVRTAGRLYNIRKHGKMIFADLGDQAGRVQVLVRKGNLPDEEFEIFKN---LVD 124

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +        G+  +S  +  +LS +    LP           R++ R+LDL
Sbjct: 125 SGDIIGVQGDLFRTK--RGENSISVSEFSLLSKSL-CALPEKFHGLKDVETRYRKRYLDL 181

Query: 134 RRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   +   V R+++I+ +R  +    F+E  TPIL                   G   
Sbjct: 182 IVNAEKREIFVMRSKLISEIRRFLTDREFLEFETPILQTVYGGANARPFTTFHNCLGQNL 241

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  G+++ F+I                                    
Sbjct: 242 FLRIAPELYLKRLVVGGYEKVFEI------------------------------------ 265

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
                    + F N +  + +       +    Y       R+   M ++TE        
Sbjct: 266 --------CKNFRNEDIDTTHNPEFTMIEVYEAY-------RDYNDMMDLTE--SLVSEL 308

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
           VF    S         I  +      +  D + E+A                  G     
Sbjct: 309 VFKLTGSYEVQMGEKTINLRSPWKRISMEDALKEYA------------------GLDIFA 350

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
             +       + + I +   ++D                F A          G++     
Sbjct: 351 HSI------EDLKKIAIENRIED-------YEKAKSHGEFLALLFE------GLVEDKLI 391

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +I DFP      E   +   H                   +    +++L  NG+E+A
Sbjct: 392 DPTFIYDFPV-----ENSPLAKNHR----------------EKAGFVERFELFLNGWELA 430

Query: 493 SGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G    +      + F      ++      +        A   G+PP GG+  GIDR+ M
Sbjct: 431 NGYSELNDPLEQEKRFEEQDKKRKLGDLEAQTVDYDFINALGYGLPPTGGMGLGIDRLTM 490

Query: 549 LLLGAKNVREVSLFPMSQN 567
           +L G ++++EV LFP  + 
Sbjct: 491 ILSGLESIKEVILFPQMKR 509


>gi|315640561|ref|ZP_07895669.1| lysine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315483765|gb|EFU74253.1| lysine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 497

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 72/361 (19%), Positives = 135/361 (37%), Gaps = 35/361 (9%)

Query: 2   HRY-RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH   +L             ++G    ++G +   R  G + F  ++D  G  Q+
Sbjct: 35  HRFERTHQSAELHELFDPRTKEELEEMGLTASVAGRIVTKRGKGKVGFAHLQDREGRIQI 94

Query: 51  VANPDSAC---FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
               D      +++ K         + G +M            TG++ +   +I ILS A
Sbjct: 95  YVRKDQVGDEPYDVFKHADLGDFFGVTGQIMKTD---------TGEVTIKPTEITILSKA 145

Query: 108 EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECST 166
              PLP           R++ R+LDL  +    +   KR++II+ +R  +    ++E  T
Sbjct: 146 LR-PLPDKYHGLTNVEQRYRQRYLDLISNQESFDRFTKRSKIISEIRRYLDGLGYLEVET 204

Query: 167 PILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           P+L   +    AR F+          Y L  A + + + L+  G ++ ++I   FR+E  
Sbjct: 205 PVLHNQAGGAAARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGI 263

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            +   P EF  ++   ++ +  D+++  E ++R V E+  +  +       I Y  A   
Sbjct: 264 DTTHNP-EFTMMECYTAYTDYRDVMDLTEAIIRTVAEKTLDTTS-------ITYGGAPVD 315

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
            G+D   +     +   T      E  +                    G     F +   
Sbjct: 316 LGSDFRRVHMADAVKEKTGVDFWQEMSIEQARQYAKEHNVEITDAMAVGHILNEFFETFV 375

Query: 346 E 346
           E
Sbjct: 376 E 376



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS----EVM 504
           E+ +      +  P       K N        +++L   G E A+     +      E  
Sbjct: 376 EETLQQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFTELNDPIDQRERF 435

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +         +           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP 
Sbjct: 436 EEQEREREAGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPT 495

Query: 565 SQ 566
            +
Sbjct: 496 MR 497


>gi|22127148|ref|NP_670571.1| lysyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45443319|ref|NP_994858.1| lysyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|51597474|ref|YP_071665.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108806378|ref|YP_650294.1| lysyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108813247|ref|YP_649014.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145597934|ref|YP_001162010.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|150260101|ref|ZP_01916829.1| lysyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153947369|ref|YP_001399867.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162420680|ref|YP_001608157.1| lysyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165924940|ref|ZP_02220772.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165937386|ref|ZP_02225950.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166010379|ref|ZP_02231277.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166212829|ref|ZP_02238864.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399819|ref|ZP_02305337.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167418755|ref|ZP_02310508.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425298|ref|ZP_02317051.1| lysyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|170023173|ref|YP_001719678.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186896594|ref|YP_001873706.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218928061|ref|YP_002345936.1| lysyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229837574|ref|ZP_04457736.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229840797|ref|ZP_04460956.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229842644|ref|ZP_04462799.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229903703|ref|ZP_04518816.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270487482|ref|ZP_06204556.1| lysine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294502945|ref|YP_003567007.1| lysyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|32130174|sp|Q8ZHK5|SYK_YERPE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81638631|sp|Q666T3|SYK_YERPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|122979986|sp|Q1CF16|SYK_YERPN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123072973|sp|Q1CB23|SYK_YERPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166230602|sp|A4TIC5|SYK_YERPP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166980072|sp|A7FF39|SYK_YERP3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710933|sp|A9R4M4|SYK_YERPG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238688479|sp|B1JPH6|SYK_YERPY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238691348|sp|B2K0N6|SYK_YERPB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|21960209|gb|AAM86822.1|AE013928_7 lysine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45438188|gb|AAS63735.1| lysyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|51590756|emb|CAH22401.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108776895|gb|ABG19414.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108778291|gb|ABG12349.1| lysyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115346672|emb|CAL19555.1| lysyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145209630|gb|ABP39037.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149289509|gb|EDM39586.1| lysyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152958864|gb|ABS46325.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162353495|gb|ABX87443.1| lysyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165914860|gb|EDR33473.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165923140|gb|EDR40291.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990865|gb|EDR43166.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166206121|gb|EDR50601.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962749|gb|EDR58770.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050527|gb|EDR61935.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055698|gb|EDR65482.1| lysyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169749707|gb|ACA67225.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186699620|gb|ACC90249.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|229679473|gb|EEO75576.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229690954|gb|EEO83008.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229697163|gb|EEO87210.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229704262|gb|EEO91273.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262360980|gb|ACY57701.1| lysyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262364920|gb|ACY61477.1| lysyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270335986|gb|EFA46763.1| lysine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294353404|gb|ADE63745.1| lysyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320014036|gb|ADV97607.1| lysyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 505

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 73/357 (20%), Positives = 143/357 (40%), Gaps = 35/357 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           + +    +L   ++   V ++G +   R  G   F+ ++D  G  Q+  + D     +  
Sbjct: 53  FDSKENEELEALNID--VTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYN 110

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++    +       TG++ +   ++ +L+ A   PLP        + 
Sbjct: 111 EEFKKWDL---GDILGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQE 164

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL  +   ++  K R+++++ +R  M+ + F+E  TP++        AR F+
Sbjct: 165 TRYRQRYLDLIANDESRHTFKVRSQVMSGIRSFMVEKGFMEVETPMMQVIPGGASARPFV 224

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M
Sbjct: 225 THHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMELYM 282

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E + R + E                   ++ +YG    D   P     
Sbjct: 283 AYADYKDLIVLTEELFRTLTETILG--------------SSVVQYGEQTFDFGKPFAKLT 328

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAI-------PAKGGGGNRAFCDRMNEWARSQ 351
           + E          + +  ++   +  AI         K  G  R  C+   E A S 
Sbjct: 329 MKEAICKYRPE--TNVADLDDMDKAVAIAESLGIKVEKSWGLGRIQCEIFEETAESH 383



 Score = 97.4 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 70/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P AK          R   ++ D D       D     + +   +   +  LG I C  FE
Sbjct: 323 PFAKLTMKEAICKYRPETNVADLDDM-----DKAVAIAESLGIKVEKSWGLGRIQCEIFE 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND       +++    G EI +
Sbjct: 378 ------------ETAESHLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F++   +KE  ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYITALEHGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|145641184|ref|ZP_01796764.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145274021|gb|EDK13887.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 502

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 67/289 (23%), Positives = 125/289 (43%), Gaps = 19/289 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+++G +   R  G   F+ I+D  G  Q+    D+    +       W L   G ++ 
Sbjct: 63  EVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDL---GDIIG 119

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL- 138
                      T ++ +   ++++L+ A   PLP        + +R++ R+LDL  +   
Sbjct: 120 VKGTLF--KTKTNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISNEES 176

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            +  + R++++  +R   I++ F+E  TP+L        AR F+          Y L  A
Sbjct: 177 RRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMY-LRIA 235

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+++  E +L
Sbjct: 236 PELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNTEELL 294

Query: 258 RGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           R +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 295 RKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDL 343



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 12/180 (6%)

Query: 396 GDSCFFIAGDPLKFCSFAADA-RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            D+      D         D  R    A+ LGI     +    I++   +E   E   I 
Sbjct: 326 HDATIKYGADKGIVKEDLYDFNRAKATAERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQ 384

Query: 454 FAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                F M      S     ND       +++L   G EI +G    + +E   + F   
Sbjct: 385 PT---FLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQ 441

Query: 512 GISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 442 VAAKEAGDDEAMFKDDDFVVALEHGLPPTAGEGLGIDRLAMLYANASSIRDVILFPAMRQ 501


>gi|254832543|ref|ZP_05237198.1| lysyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 498

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 143/373 (38%), Gaps = 28/373 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +    V ++G +   R  G + F  I+D +   Q+    D+   +     +   +  I
Sbjct: 56  LEEAAIEVSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKLADLGDI 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      +       TG++ + A +  +LS +   PLP           R++ R+LDL
Sbjct: 116 IGI------KGTIFRTNTGELSVKATEFTLLSKSLR-PLPDKYHGLKDVEQRYRQRYLDL 168

Query: 134 RRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +       V R++I+   R  M  + F+E  TP+L T +    A+ F+          
Sbjct: 169 ITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMEL 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++
Sbjct: 229 Y-LRIALELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMD 286

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +E ++  V ++ +              +     Y  D       I M +  + +V  +F
Sbjct: 287 LVEGLVSTVCKQVNG-----------TTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDF 335

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
              +         +   +P      +  +   +NE+  +  +  L    +     G+   
Sbjct: 336 WNVTSDEEALELAKKHDVPV---TEHMTYGHILNEFFETYVEEKLVQPTFVY---GHPVE 389

Query: 372 MGPVAKHLNIVNT 384
           + P+AK       
Sbjct: 390 ISPLAKKNKEDER 402



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK +          +    + K  +       +++L   G E A+     +  
Sbjct: 368 FFETYVEEKLVQPTFVYGHPVEISPLAKKNKEDERF-TDRFELFIVGREHANAFSELNDP 426

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +   G       A + G+PP GG+  GIDR+VMLL  A ++R
Sbjct: 427 IDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIR 486

Query: 558 EVSLFPMSQNF 568
           ++ LFP  ++ 
Sbjct: 487 DILLFPTMKHR 497


>gi|46906461|ref|YP_012850.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|226222857|ref|YP_002756964.1| lysyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254826414|ref|ZP_05231415.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254854616|ref|ZP_05243964.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254933690|ref|ZP_05267049.1| lysyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|254992593|ref|ZP_05274783.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|300766503|ref|ZP_07076451.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|67461802|sp|Q724I4|SYK_LISMF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|46879725|gb|AAT03027.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|225875319|emb|CAS04016.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP
           80459]
 gi|258608011|gb|EEW20619.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293585254|gb|EFF97286.1| lysyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293595655|gb|EFG03416.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300512785|gb|EFK39884.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|332310639|gb|EGJ23734.1| Lysyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 498

 Score =  207 bits (528), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 144/373 (38%), Gaps = 28/373 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +    V ++G +   R  G + F  I+D +   Q+    D+   +     +   +  I
Sbjct: 56  LEEAAIEVSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKLADLGDI 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      +       TG++ + A +  +LS +   PLP           R++ R+LDL
Sbjct: 116 IGI------KGTIFRTNTGELSVKATEFTLLSKSLR-PLPDKYHGLKDVEQRYRQRYLDL 168

Query: 134 RRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +       V R++I+   R  M  + F+E  TP+L T +    A+ F+          
Sbjct: 169 ITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMEL 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++
Sbjct: 229 Y-LRIALELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMD 286

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +E ++  V ++ +              +     Y  D       I M +  + +V  +F
Sbjct: 287 LVEGLVSTVCKQVNG-----------TTEITYGEYNVDLTPNWRRIHMADAVKEYVGVDF 335

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
              +         +   +P      +  +   +NE+  +  +  L    +     G+   
Sbjct: 336 WNVTSDEEARELAKKHNVPV---TEHMTYGHILNEFFETYVEEKLIQPTFVY---GHPVE 389

Query: 372 MGPVAKHLNIVNT 384
           + P+AK     + 
Sbjct: 390 ISPLAKKNKEDDR 402



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + K  +       +++L   G E A+     +  
Sbjct: 368 FFETYVEEKLIQPTFVYGHPVEISPLAKKNKEDDRF-TDRFELFIVGREHANAFSELNDP 426

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +   G       A + G+PP GG+  GIDR+VMLL  A ++R
Sbjct: 427 IDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIR 486

Query: 558 EVSLFPMSQNF 568
           ++ LFP  ++ 
Sbjct: 487 DILLFPTMKHR 497


>gi|218895213|ref|YP_002443624.1| lysyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228898830|ref|ZP_04063113.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228963177|ref|ZP_04124347.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|229074138|ref|ZP_04207185.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|229113753|ref|ZP_04243189.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|226737090|sp|B7ISY7|SYK_BACC2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|218541672|gb|ACK94066.1| lysyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228669750|gb|EEL25156.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228709032|gb|EEL61158.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228796562|gb|EEM44000.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228860855|gb|EEN05232.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 499

 Score =  207 bits (528), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 60/312 (19%), Positives = 124/312 (39%), Gaps = 20/312 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   ++   V ++G +   R  G   F  I+D +G  Q+    D+   E  +   +  +
Sbjct: 55  ELEEKEI--TVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDTVGDEEYELFTTADL 112

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               G ++    +    N+  G++ + A    +L+ +   PLP           R++ R+
Sbjct: 113 ----GDLVGIEGKVFKTNV--GELSVKATGFTLLTKSLR-PLPDKYHGLKDVEQRYRQRY 165

Query: 131 LDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQ 188
           LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F        
Sbjct: 166 LDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFTTHHNALD 225

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + +D
Sbjct: 226 MELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYND 283

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPIIMHN 301
           I+   EN++  + ++     T+      I  +    R             D  NP+ +  
Sbjct: 284 IMKLTENMVAHIAKKVLGTTTIQYGDYEINLEPEWTRLHMVDAIKQHSGADFWNPMSVEE 343

Query: 302 VTEHFVHSEFRV 313
             E        +
Sbjct: 344 ARELAKEHNVEI 355



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   +  E   I++  F+E   E+K I      +  P       K ND    
Sbjct: 345 RELAKEHNVEIKDTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDEDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|16802274|ref|NP_463759.1| lysyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224500853|ref|ZP_03669202.1| lysyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|224503815|ref|ZP_03672122.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|284803032|ref|YP_003414897.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284996173|ref|YP_003417941.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|38258394|sp|Q8YAB8|SYK_LISMO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|16409593|emb|CAD00755.1| lysyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|284058594|gb|ADB69535.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284061640|gb|ADB72579.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 498

 Score =  207 bits (528), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 143/373 (38%), Gaps = 28/373 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +    V ++G +   R  G + F  I+D +   Q+    D+   +     +   +  I
Sbjct: 56  LEEAAIEVSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKLADLGDI 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      +       TG++ + A +  +LS +   PLP           R++ R+LDL
Sbjct: 116 IGI------KGTIFRTNTGELSVKATEFTLLSKSLR-PLPDKYHGLKDVEQRYRQRYLDL 168

Query: 134 RRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +       V R++I+   R  M  + F+E  TP+L T +    A+ F+          
Sbjct: 169 ITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMEL 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++
Sbjct: 229 Y-LRIALELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMD 286

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +E ++  V ++ +              +     Y  D       I M +  + +V  +F
Sbjct: 287 LVEGLVSTVCKQVNG-----------TTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDF 335

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
              +         +   +P      +  +   +NE+  +  +  L    +     G+   
Sbjct: 336 WNVTSDEEARELAKKHDVPV---TEHMTYGHILNEFFETYVEEKLIQPTFVY---GHPVE 389

Query: 372 MGPVAKHLNIVNT 384
           + P+AK       
Sbjct: 390 ISPLAKKNKEDER 402



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + K  +       +++L   G E A+     +  
Sbjct: 368 FFETYVEEKLIQPTFVYGHPVEISPLAKKNKEDERF-TDRFELFIVGREHANAFSELNDP 426

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +   G       A + G+PP GG+  GIDR+VMLL  A ++R
Sbjct: 427 IDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIR 486

Query: 558 EVSLFPMSQNF 568
           ++ LFP  ++ 
Sbjct: 487 DILLFPTMKHR 497


>gi|166711948|ref|ZP_02243155.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 505

 Score =  207 bits (528), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 67/302 (22%), Positives = 120/302 (39%), Gaps = 25/302 (8%)

Query: 5   RTHSCGDLGVSDV-------------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL                  G  V+++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPDALEASGRTVKMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              +           + +     G +++           TG++ + A  + +L+ +   P
Sbjct: 101 LQGNVLG-----DAYTAFKGWDVGDIVAVEGGL--TRTKTGELSVKASALRLLTKSLR-P 152

Query: 112 LPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP           R++ R++DL       +  +KR++II +MR  + A  F+E  TP++ 
Sbjct: 153 LPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPMMH 212

Query: 171 -ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   +  
Sbjct: 213 YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRH 271

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  L++  ++    +I++  E V+R   +       VS +   I    A RR+  D
Sbjct: 272 NP-EFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFRRWRMD 330

Query: 290 KP 291
           + 
Sbjct: 331 EA 332



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           + +D       +++L  NG E+A+G    +  E     F     +K+  ++         
Sbjct: 402 RSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMHFDADY 461

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 462 IRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|68249757|ref|YP_248869.1| lysyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81335815|sp|Q4QL88|SYK_HAEI8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|68057956|gb|AAX88209.1| lysyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 502

 Score =  207 bits (528), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 67/289 (23%), Positives = 125/289 (43%), Gaps = 19/289 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+++G +   R  G   F+ I+D     Q+    D+    + K     W L   G ++ 
Sbjct: 63  EVQVAGRIMTRRAMGKATFITIQDMSSKIQLYVARDNLPEGVYKDDVGTWDL---GDIVG 119

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL- 138
                      T ++ +   ++++L+ A   PLP        + +R++ R+LDL  +   
Sbjct: 120 VKGTLF--KTKTDELTVKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISNEES 176

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            +  + R++++  +R   I++ F+E  TP+L        AR F+          Y L  A
Sbjct: 177 RRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMY-LRIA 235

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+++  E +L
Sbjct: 236 PELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNTEELL 294

Query: 258 RGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           R +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 295 RKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATVKYGADKGIVKEDL 343



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 10/153 (6%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIK 478
           A+ LGI     +    I++   +E   E   I      F M      S     ND     
Sbjct: 353 AERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQPT---FLMAHPAEISPLARRNDENPDV 408

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMP 534
             +++L   G EI +G    + +E   + F     +KE  ++           A + G+P
Sbjct: 409 TDRFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVVALEHGLP 468

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           P  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 469 PTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|190574184|ref|YP_001972029.1| lysyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|190012106|emb|CAQ45729.1| putative lysyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
          Length = 503

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 62/276 (22%), Positives = 118/276 (42%), Gaps = 12/276 (4%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+++G +   R  G   F  I+D  G  Q+          +     + +     G +
Sbjct: 65  GRQVKMAGRLMAKRIMGKASFAQIQDESGRIQLFLQG-----AVLGDAYTAFKGWDVGDI 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RD 136
           ++           TG++ + A+ I +L+ +   PLP           R++ R++DL    
Sbjct: 120 IAVEGGL--TRTKTGELSVKAESIRLLTKSLR-PLPDKWHGLADVEQRYRQRYVDLIVTP 176

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALP 195
                 +KR++II +MR  +   +F+E  TP++        A+ F           Y L 
Sbjct: 177 ESRAVFIKRSKIIRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDLY-LR 235

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L   G +R ++I   FR+E   +   P EF  +++  ++   ++I++  E 
Sbjct: 236 VAPELYLKRLTVGGLERVYEINRNFRNEGVSTRHNP-EFTMMELYEAYATYNEIMDLTEG 294

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           V+R V +  + G  V  +  +I    A RR+  D+ 
Sbjct: 295 VIRDVAKAVNGGTEVEWDGAKIDLGPAFRRWRMDEA 330



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGL 525
           + ND       +++L  NG E+A+G    +  E   Q F     +K    +   +     
Sbjct: 400 RANDNDPGYTDRFELFVNGKELANGFSELNDPEDQAQRFQAQVAAKEGGDDEAMHYDADY 459

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  G+DR+VMLL G+ ++R+V LFP
Sbjct: 460 IRALEYGMAPTGGLGIGVDRLVMLLTGSSSIRDVLLFP 497


>gi|148926492|ref|ZP_01810175.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145844655|gb|EDK21761.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 501

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 98/550 (17%), Positives = 190/550 (34%), Gaps = 122/550 (22%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +  +R  G  IF +I D     Q+  + DS   E+   ++    L +  +V+   
Sbjct: 59  VVAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKN--LEVGDIVL--- 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
            +       TG+  L A ++++ + A  + LP           R++ R++D+  +  + K
Sbjct: 114 VKGFPFVTKTGEFSLHASEVKLATKA-IVLLPEKYHGLTDIEQRYRKRYVDMIMNVEVRK 172

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           + + R+++++ +R     + F+E  TP++   +        V    + G    L  AP+ 
Sbjct: 173 DFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPEL 232

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF+  F+I  CFR+E                          ++   N     
Sbjct: 233 YLKRLIVGGFEAVFEINRCFRNEG-------------------------MDLTHN----- 262

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
                        F  I +  A   Y            + ++TE        +F+ +L  
Sbjct: 263 -----------PEFTTIEFYWAYHNYKD----------LMDLTEE-------LFALLLDK 294

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
               +      K    ++ F                     R+     +   G + + L 
Sbjct: 295 LNLGKTIEFDGKMINFSKPFE--------------------RITYKDALCKYGGLDRDL- 333

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
           I + E I  +L         F A + L+        +  +      +        +++DF
Sbjct: 334 IEDKEKILTKLKAD-----GFEANEKLE----LGHLQAELFD--NYVEEKLINPTFVIDF 382

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P             + +P +        +         A +++L   G E+A+G    + 
Sbjct: 383 P------------ISISPLSRRSDEDSQI---------AERFELFICGRELANGFNELND 421

Query: 501 SEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                + F     +K   +            A   GMPP  G   GIDR+VMLL   K++
Sbjct: 422 PLDQYERFLKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKSI 481

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 482 RDVILFPAMR 491


>gi|84624383|ref|YP_451755.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|123752737|sp|Q2P1U6|SYK_XANOM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|84368323|dbj|BAE69481.1| lysyl-tRNA synthetase heat inducible [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
          Length = 505

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 67/302 (22%), Positives = 120/302 (39%), Gaps = 25/302 (8%)

Query: 5   RTHSCGDLGVSDV-------------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL                  G  V+++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPDALEASGRTVKMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              +           + +     G +++           TG++ + A  + +L+ +   P
Sbjct: 101 LQGNVLG-----DAYTAFKGWDVGDIVAVEGGL--TRTKTGELSVKASALRLLTKSLR-P 152

Query: 112 LPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP           R++ R++DL       +  +KR++II +MR  + A  F+E  TP++ 
Sbjct: 153 LPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPMMH 212

Query: 171 -ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   +  
Sbjct: 213 YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRH 271

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  L++  ++    +I++  E V+R   +       VS +   I    A RR+  D
Sbjct: 272 NP-EFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFRRWRMD 330

Query: 290 KP 291
           + 
Sbjct: 331 EA 332



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           + +D       +++L  NG E+A+G    +  E     F     +K+  ++         
Sbjct: 402 RSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMHFDADY 461

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GMPP GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 462 IRALEYGMPPTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|325916712|ref|ZP_08178969.1| lysyl-tRNA synthetase (class II) [Xanthomonas vesicatoria ATCC
           35937]
 gi|325537061|gb|EGD08800.1| lysyl-tRNA synthetase (class II) [Xanthomonas vesicatoria ATCC
           35937]
          Length = 505

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 66/302 (21%), Positives = 120/302 (39%), Gaps = 25/302 (8%)

Query: 5   RTHSCGDLGVSDV-------------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL                  G  V+++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPEALEASGRTVKMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              +           + +     G +++           TG++ + A  + +L+ +   P
Sbjct: 101 LQGNVLG-----DAYTAFKGWDVGDIVAVEGGL--TRTKTGELSVKATALRLLTKSLR-P 152

Query: 112 LPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP           R++ R++DL       +  +KR++II +MR  + A  F+E  TP++ 
Sbjct: 153 LPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPMMH 212

Query: 171 -ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   +  
Sbjct: 213 YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRH 271

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  L++  ++    +I++  E V+R   +       V+ +   I    A RR+  D
Sbjct: 272 NP-EFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVNWDGAAIDLAPAFRRWRMD 330

Query: 290 KP 291
           + 
Sbjct: 331 EA 332



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
           + +D       +++L  NG E+A+G    +  E     F     +K+       +     
Sbjct: 402 RSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMHYDADY 461

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 462 IRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|52548501|gb|AAU82350.1| aspartyl-tRNA synthetase [uncultured archaeon GZfos17A3]
          Length = 439

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 92/358 (25%), Positives = 160/358 (44%), Gaps = 30/358 (8%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAK 63
               ++   + G  V ++GWVH  R  GG+ FL +RD  G  QV  N    +   F   K
Sbjct: 9   KYSTEITADNDGETVCIAGWVHEKRDLGGVFFLIVRDFGGFAQVTLNRKKTEKELFARVK 68

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V  E V+ I+G V S S       II  Q+E+ ++  ++L      PL    +      
Sbjct: 69  KVPRESVVAIEGKVKSESKAPNGYEIIPNQMEVLSEASQVL------PLDTTEKVGAELD 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R   RF+DLR +   +  + R+ ++ ++R  +    FIE +TP + +++ EG       
Sbjct: 123 TRLDARFMDLRIERTKQIFIIRSCVLKAIREFLDERGFIEINTPKIVSAATEGGTALFPI 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           S   + +F  L Q+PQ YKQ+LMASGFDR ++IAP FR E+  + +   E   +D+E++F
Sbjct: 183 SYFEREAF--LNQSPQLYKQMLMASGFDRVYEIAPIFRAEEHDTTKHLNEATSMDIEVAF 240

Query: 244 VEQDDILNTMENVLRGVFEEFSNG------------NTVSNNFLRICYDDAIRRYGTDKP 291
           V   +++  +E ++  V+ +  +                   F RI Y++AI        
Sbjct: 241 VSDKEVMKILEELIVFVYSKIVDYPGLAKLNLQLPLEVPKIPFRRITYEEAIESVSEAGE 300

Query: 292 DLRNPIIMHNVTEH----FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
           ++     +    E      +   + +     ++ P Y   A PA     ++  C+  +
Sbjct: 301 EIEWGEDLGTSAERTLGAMIGELYFITDWPCAIKPFY---AQPADAEAKSKHTCNAFD 355



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/176 (25%), Positives = 70/176 (39%), Gaps = 27/176 (15%)

Query: 401 FIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEEKKIDFA 455
               + ++  S A +      ++LG            E  +I D+P             A
Sbjct: 286 ITYEEAIESVSEAGE-EIEWGEDLGTSAERTLGAMIGELYFITDWP------------CA 332

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
             PF       E+   +         +DL+    E+ASG  R H  E++ +   + G+S 
Sbjct: 333 IKPFYAQPADAEAKSKH-----TCNAFDLMHPRVELASGSQRVHSYELLKRNIESKGLSA 387

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
               + F      F+ GMPPH G   GIDR++M +L  +N+REV LFP  +     
Sbjct: 388 ----DSFEFYLDTFRFGMPPHAGWGLGIDRLLMCMLEIENIREVVLFPRDRRRLAP 439


>gi|229015479|ref|ZP_04172478.1| Lysyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229021688|ref|ZP_04178271.1| Lysyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228739624|gb|EEL90037.1| Lysyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228745822|gb|EEL95825.1| Lysyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 499

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 60/312 (19%), Positives = 123/312 (39%), Gaps = 20/312 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   ++   V ++G +   R  G   F  I+D  G  Q+    D+   E  +   +  +
Sbjct: 55  ELEEKEI--TVSIAGRIMTKRGKGKAGFAHIQDLQGQVQIYVRKDTVGDEEYELFTTADL 112

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               G ++    +    N+  G++ + A    +L+ +   PLP           R++ R+
Sbjct: 113 ----GDLVGIEGKVFKTNV--GELSVKATGFTLLTKSLR-PLPDKYHGLKDVEQRYRQRY 165

Query: 131 LDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQ 188
           LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F        
Sbjct: 166 LDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFTTHHNALD 225

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + +D
Sbjct: 226 MELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYND 283

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPIIMHN 301
           I+   EN++  + ++     T+      I  +    R             D  NP+ +  
Sbjct: 284 IMKLTENMVAHIAKKVLGTTTIQYGDYEINLEPEWTRLHMVDAIKQHSGADFWNPMSVEE 343

Query: 302 VTEHFVHSEFRV 313
             E        +
Sbjct: 344 ARELAKEHNVEI 355



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   +  E   I++  F+E   E+K I      +  P       K ND    
Sbjct: 345 RELAKEHNVEIKDTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDQDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|188575994|ref|YP_001912923.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|238689562|sp|B2SV97|SYK_XANOP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|188520446|gb|ACD58391.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 505

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 67/302 (22%), Positives = 120/302 (39%), Gaps = 25/302 (8%)

Query: 5   RTHSCGDLGVSDV-------------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL                  G  V+++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPDALEASGRTVKMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              +           + +     G +++           TG++ + A  + +L+ +   P
Sbjct: 101 LQGNVLG-----DAYTAFKGWDVGDIVAVEGGL--TRTKTGELSVKASALRLLTKSLR-P 152

Query: 112 LPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP           R++ R++DL       +  +KR++II +MR  + A  F+E  TP++ 
Sbjct: 153 LPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPMMH 212

Query: 171 -ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   +  
Sbjct: 213 YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRH 271

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  L++  ++    +I++  E V+R   +       VS +   I    A RR+  D
Sbjct: 272 NP-EFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFRRWRMD 330

Query: 290 KP 291
           + 
Sbjct: 331 EA 332



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           + +D       +++L  NG E+A+G    +  E     F     +K+  ++         
Sbjct: 402 RSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMHFDADY 461

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 462 IRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|319776547|ref|YP_004139035.1| lysyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|329124058|ref|ZP_08252605.1| lysine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317451138|emb|CBY87371.1| lysyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327467483|gb|EGF12981.1| lysine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 502

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 67/289 (23%), Positives = 125/289 (43%), Gaps = 19/289 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+++G +   R  G   F+ I+D  G  Q+    D+    +       W L   G ++ 
Sbjct: 63  EVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDL---GDIIG 119

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL- 138
                      T ++ +   ++++L+ A   PLP        + +R++ R+LDL  +   
Sbjct: 120 VKGTLF--KTKTNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISNEES 176

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            +  + R++++  +R   I++ F+E  TP+L        AR F+          Y L  A
Sbjct: 177 RRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMY-LRIA 235

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+++  E +L
Sbjct: 236 PELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNTEELL 294

Query: 258 RGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           R +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 295 RKLAIDILGTTIVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDL 343



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 12/180 (6%)

Query: 396 GDSCFFIAGDPLKFCSFAADA-RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            D+      D         D  R    A+ LGI     +    I++   +E   E   I 
Sbjct: 326 HDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQ 384

Query: 454 FAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                F M      S     ND       +++L   G EI +G    + +E   + F   
Sbjct: 385 PT---FLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQ 441

Query: 512 GISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 442 VAAKEAGDDEAMFKDDDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|254373628|ref|ZP_04989112.1| lysine-tRNA ligase [Francisella novicida GA99-3548]
 gi|151571350|gb|EDN37004.1| lysine-tRNA ligase [Francisella novicida GA99-3548]
          Length = 576

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 17/300 (5%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV            
Sbjct: 122 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPDGQY 181

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++ ++   LC  G ++  +      N  TG++ + A   EIL+ A   PLP        +
Sbjct: 182 ETFKN---LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHGLADQ 235

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++       A    
Sbjct: 236 EMRYRQRYVDLITNEKARGVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAAAKPF 295

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  L+  M
Sbjct: 296 KTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTMLEFYM 354

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPD 292
           ++ + +D+++  E++L  + +E      +            + RI   D+I +Y  D   
Sbjct: 355 AYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYNDDITK 414



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 106/337 (31%), Gaps = 44/337 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---- 298
           + ++ D +     ++         G   +  F        +  Y    P+L    +    
Sbjct: 269 YFDRLDFMEVETPMMH-----VLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVVGG 323

Query: 299 MHNVTEHFVH-SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQPGL 356
              V E   +     V S+        E +   A          D +++  +   G   L
Sbjct: 324 FERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEIL 383

Query: 357 AYIFWRLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            Y  ++++  G    +     + K+ + +  E +      +            ++     
Sbjct: 384 EYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKK---IAEKLKIKVEAYHEL 440

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               N I +E   +     +  +I D+P               +P    Q G        
Sbjct: 441 GHLINEIFEE--TVEHQLIQPTFITDYP------------AVVSPLARRQDGNPEFTD-- 484

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  +++      E+A+G    + +E   + F     +     +          RA 
Sbjct: 485 -------RFEFFIGAREVANGFSELNDAEDQAERFRKQVEAAASGDDEAMPYDKDYIRAL 537

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP  G   GIDR+VM L  ++++R+V LFP  +
Sbjct: 538 EYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFPHMK 574


>gi|238028012|ref|YP_002912243.1| lysyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237877206|gb|ACR29539.1| Lysyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 508

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 73/336 (21%), Positives = 126/336 (37%), Gaps = 33/336 (9%)

Query: 6   THSCGDLGV--SDVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL    +D            VRL+G +   R  G   F  ++D  G  Q    P 
Sbjct: 43  THHAADLQSTYADADKEALEAQPLEVRLAGRMMLKRVMGKASFATVQDGSGQIQFFVTPA 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +LS A   PLP  
Sbjct: 103 DVGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVKCSELRLLSKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + +R++ R++DL            RT+ I S+R  M    F+E  TP+L     
Sbjct: 156 FHGLADQEMRYRQRYVDLIVTPETRNTFRARTKAIASIRKFMSDAEFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFITHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T+            F R+    AI+
Sbjct: 274 FTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLARPFHRLTITQAIQ 333

Query: 285 RY--GTDKPDLRNP-IIMHNVTEHFVHSEFRVFSKI 317
           +Y  G     L +P  +   +    V      F   
Sbjct: 334 KYAPGYGDAQLADPAFLRTELKRFGVDVGQPAFLNA 369



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 61/164 (37%), Gaps = 27/164 (16%)

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463
           G P    +     +  + +E        +E  +I+D+P                      
Sbjct: 362 GQPAFLNAGLGALQLALFEE--TAESQLWEPTYIIDYP---------------------V 398

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                 + +D +     +++L   G EIA+G    +  E     F      K+  +    
Sbjct: 399 EVSPLARASDTVPGITERFELFMTGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAM 458

Query: 524 G----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                  RA + GMPP GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 459 FFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|254524293|ref|ZP_05136348.1| lysyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219721884|gb|EED40409.1| lysyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 489

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 62/276 (22%), Positives = 117/276 (42%), Gaps = 12/276 (4%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+++G +   R  G   F  I+D  G  Q+                + +     G +
Sbjct: 51  GRQVKMAGRLMAKRIMGKASFAQIQDESGRIQLFLQGTVLG-----DAYTAFKGWDVGDI 105

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RD 136
           ++           TG++ + A+ I +L+ +   PLP           R++ R++DL    
Sbjct: 106 IAVEGGL--TRTKTGELSVKAESIRLLTKSLR-PLPDKWHGLADVEQRYRQRYVDLIVTP 162

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALP 195
                 +KR++II +MR  +   +F+E  TP++        A+ F           Y L 
Sbjct: 163 ESRAVFIKRSKIIRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDLY-LR 221

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L   G +R ++I   FR+E   +   P EF  +++  ++   ++I++  E 
Sbjct: 222 VAPELYLKRLTVGGLERVYEINRNFRNEGVSTRHNP-EFTMMELYEAYATYNEIMDLTEG 280

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           V+R V +  + G  V  +  +I    A RR+  D+ 
Sbjct: 281 VIRDVAQAVNGGTEVEWDGAKIDLGPAFRRWRMDEA 316



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGL 525
           + ND       +++L  NG E+A+G    +  E   Q F     +K    +   +     
Sbjct: 386 RANDNDPGYTDRFELFVNGKELANGFSELNDPEDQAQRFQAQVAAKEGGDDEAMHYDADY 445

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  G+DR+VMLL G+ ++R+V LFP
Sbjct: 446 IRALEYGMAPTGGLGIGVDRLVMLLTGSSSIRDVLLFP 483


>gi|21242620|ref|NP_642202.1| lysyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|39932221|sp|Q8PLC6|SYK_XANAC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|21108084|gb|AAM36738.1| lysyl-tRNA synthetase heat inducible [Xanthomonas axonopodis pv.
           citri str. 306]
          Length = 505

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 68/302 (22%), Positives = 119/302 (39%), Gaps = 25/302 (8%)

Query: 5   RTHSCGDLGVSDV-------------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL                  G  VR++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPEALEASGRTVRMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              +           + +     G +++           TG++ + A  + +L+ +   P
Sbjct: 101 LQGNVLG-----DAYTAFKGWDVGDIVAVEGGL--TRTKTGELSVKASALRLLTKSLR-P 152

Query: 112 LPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP           R++ R++DL       +  +KR++II +MR  + A  F+E  TP++ 
Sbjct: 153 LPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPMMH 212

Query: 171 -ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   +  
Sbjct: 213 YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRH 271

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  L++  ++     I++  E V+R   +       VS +   I    A RR+  D
Sbjct: 272 NP-EFTMLELYEAYATYHQIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFRRWRMD 330

Query: 290 KP 291
           + 
Sbjct: 331 EA 332



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           + +D       +++L  NG E+A+G    +  E     F     +K+  ++         
Sbjct: 402 RSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMHFDADY 461

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 462 IRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|220934634|ref|YP_002513533.1| lysyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|259511536|sp|B8GRJ2|SYK_THISH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|219995944|gb|ACL72546.1| lysyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 499

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 127/362 (35%), Gaps = 40/362 (11%)

Query: 5   RTHSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R    G+L                  V ++G +   R  G   F  I D  G  Q+    
Sbjct: 37  RNVMSGELHAEYDAKPAEFFEQNAIRVSVAGRMMAKRIMGKASFTQILDMSGRIQLFIQR 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS         ++  V  I G      AE       TG++ ++   + +L+ +   PLP 
Sbjct: 97  DSLPDGAYSDFKTWDVGDILG------AEGTLFKTKTGELTVNVDSLRLLTKSLR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R++DL  +   +   + RTR+I  +R  +    F+E  TP++ A  
Sbjct: 150 KFHGLSDTETRYRQRYVDLIMNEPVRETFRTRTRVIQFIRQFLDQRGFLEVETPMMQAIP 209

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F           + L  AP+ Y + L+  GF+R ++I   FR+E   +   P 
Sbjct: 210 GGATARPFATHHHALDMQLF-LRIAPELYLKRLVVGGFERVYEINRNFRNEGLSTRHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  ++   ++    D+++  E++LR +  E                      Y  +  D
Sbjct: 268 EFTMVEFYEAYANYHDLMDLTEDLLRDLTLEVLGSTQ--------------VHYQGETYD 313

Query: 293 LRNPIIMHNVTE----HFVHSEFRVFSKILSVNPGYEVWAIPAKGG-GGNRAFCDRMNEW 347
              P     V E    H         + +       +   IP K   G  + + +   + 
Sbjct: 314 FERPFTRMTVKESILQHNPDVSEAELADLERARAVAQRLGIPLKDSYGLGKVWIEIFEKT 373

Query: 348 AR 349
             
Sbjct: 374 VE 375



 Score =  100 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 14/175 (8%)

Query: 401 FIAGDPLKFCSFAADARNH--IAQELGIINCNCFEF--CWIMDFPFYEWNEEEKKIDFAH 456
            +  +P    +  AD      +AQ LGI   + +     WI     +E   E    D   
Sbjct: 327 ILQHNPDVSEAELADLERARAVAQRLGIPLKDSYGLGKVWIE---IFEKTVEGNLKDPTF 383

Query: 457 NPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
              T     +  L + ND       +++    G EIA+G    +  E   + F      K
Sbjct: 384 --ITAYPTEVSPLARRNDEDPFVTDRFEFFVGGREIANGFSELNDYEDQAERFRKQVQEK 441

Query: 516 EVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           E  ++          RA + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 442 EAGDDEAMHFDADYLRALEHGMPPTAGEGIGIDRLVMLLTDSPSIRDVLLFPHMR 496


>gi|228905873|ref|ZP_04069771.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228853813|gb|EEM98572.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 499

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 60/312 (19%), Positives = 124/312 (39%), Gaps = 20/312 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   ++   V ++G +   R  G   F  I+D +G  Q+    D+   E  +   +  +
Sbjct: 55  ELEEKEI--TVAIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDTVGDEEYELFTTADL 112

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               G ++    +    N+  G++ + A    +L+ +   PLP           R++ R+
Sbjct: 113 ----GDLVGIEGKVFKTNV--GELSVKATGFTLLTKSLR-PLPDKYHGLKDVEQRYRQRY 165

Query: 131 LDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQ 188
           LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F        
Sbjct: 166 LDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFTTHHNALD 225

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + +D
Sbjct: 226 MELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYND 283

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPIIMHN 301
           I+   EN++  + ++     T+      I  +    R             D  NP+ +  
Sbjct: 284 IMKLTENMVAHIAKKVLGTTTIQYGDYEINLEPEWTRLHMVDAIKQHSGADFWNPMSVEE 343

Query: 302 VTEHFVHSEFRV 313
             E        +
Sbjct: 344 ARELAKEHNVEI 355



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   +  E   I++  F+E   E+K I      +  P       K ND    
Sbjct: 345 RELAKEHNVEIKDTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDQDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|30260268|ref|NP_842645.1| lysyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47525330|ref|YP_016679.1| lysyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183111|ref|YP_026363.1| lysyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49481679|ref|YP_034430.1| lysyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52145139|ref|YP_081689.1| lysyl-tRNA synthetase [Bacillus cereus E33L]
 gi|65317538|ref|ZP_00390497.1| COG1190: Lysyl-tRNA synthetase (class II) [Bacillus anthracis str.
           A2012]
 gi|118475848|ref|YP_892999.1| lysyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|165872546|ref|ZP_02217178.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167635062|ref|ZP_02393379.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167641503|ref|ZP_02399751.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170688911|ref|ZP_02880113.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170707537|ref|ZP_02897990.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177655622|ref|ZP_02936985.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190568953|ref|ZP_03021854.1| lysyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196036416|ref|ZP_03103813.1| lysyl-tRNA synthetase [Bacillus cereus W]
 gi|196041753|ref|ZP_03109043.1| lysine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196047399|ref|ZP_03114612.1| lysyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225862130|ref|YP_002747508.1| lysyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227812751|ref|YP_002812760.1| lysyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228912816|ref|ZP_04076464.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228925330|ref|ZP_04088427.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931579|ref|ZP_04094486.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943883|ref|ZP_04106269.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229089208|ref|ZP_04220490.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229119739|ref|ZP_04249001.1| Lysyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229182471|ref|ZP_04309723.1| Lysyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|229604711|ref|YP_002864729.1| lysine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254682296|ref|ZP_05146157.1| lysyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254724218|ref|ZP_05186003.1| lysyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254735479|ref|ZP_05193187.1| lysyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744619|ref|ZP_05202298.1| lysyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254756324|ref|ZP_05208353.1| lysyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254762380|ref|ZP_05214222.1| lysyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|300119172|ref|ZP_07056873.1| lysyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|39932145|sp|Q81VW3|SYK_BACAN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81397490|sp|Q6HPU0|SYK_BACHK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81689861|sp|Q63HC2|SYK_BACCZ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229793|sp|A0R8E9|SYK_BACAH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|30253589|gb|AAP24131.1| lysine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47500478|gb|AAT29154.1| lysyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177038|gb|AAT52414.1| lysyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49333235|gb|AAT63881.1| lysine--tRNA ligase (lysyl-tRNA synthetase) [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|51978608|gb|AAU20158.1| lysine--tRNA ligase (lysyl-tRNA synthetase) [Bacillus cereus E33L]
 gi|118415073|gb|ABK83492.1| lysine--tRNA ligase [Bacillus thuringiensis str. Al Hakam]
 gi|164711674|gb|EDR17219.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510488|gb|EDR85886.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167529536|gb|EDR92286.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170127533|gb|EDS96407.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170667135|gb|EDT17896.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172080033|gb|EDT65132.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190559877|gb|EDV13861.1| lysyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|195991046|gb|EDX55017.1| lysyl-tRNA synthetase [Bacillus cereus W]
 gi|196021801|gb|EDX60495.1| lysyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196027373|gb|EDX65990.1| lysine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|225790233|gb|ACO30450.1| lysine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227006353|gb|ACP16096.1| lysine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228601051|gb|EEK58619.1| Lysyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228663764|gb|EEL19342.1| Lysyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228694171|gb|EEL47852.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228815840|gb|EEM62075.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228828131|gb|EEM73858.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834377|gb|EEM79917.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228846876|gb|EEM91880.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229269119|gb|ACQ50756.1| lysine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|298723494|gb|EFI64235.1| lysyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 499

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 60/316 (18%), Positives = 125/316 (39%), Gaps = 21/316 (6%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G+    ++      V ++G +   R  G   F  I+D +G  Q+    D+   E  +  +
Sbjct: 49  GEFSKEELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +    G ++    +    N+  G++ + A    +L+ +   PLP           R+
Sbjct: 109 TADL----GDLVGIEGKVFKTNV--GELSVKATGFTLLTKSLR-PLPDKYHGLKDVEQRY 161

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F+   
Sbjct: 162 RQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ 
Sbjct: 222 NALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYA 279

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPI 297
           +  DI+   EN++  + ++     T+      I  +    R             D  NP+
Sbjct: 280 DYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWTRLHMVDAIKEHSGADFWNPM 339

Query: 298 IMHNVTEHFVHSEFRV 313
            +    E        +
Sbjct: 340 SVEEARELAKEHNVEI 355



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   +  E   I++  F+E   E+K I      +  P       K ND    
Sbjct: 345 RELAKEHNVEIKDTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDEDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|229027923|ref|ZP_04184078.1| Lysyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|229170927|ref|ZP_04298530.1| Lysyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228612593|gb|EEK69812.1| Lysyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228733437|gb|EEL84264.1| Lysyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 499

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 60/316 (18%), Positives = 125/316 (39%), Gaps = 21/316 (6%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G+    ++      V ++G +   R  G   F  I+D +G  Q+    D+   E  +  +
Sbjct: 49  GEFSKEELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +    G ++    +    N+  G++ + A    +L+ +   PLP           R+
Sbjct: 109 TADL----GDLVGIEGKVFKTNV--GELSVKATGFTLLTKSLR-PLPDKYHGLKDVEQRY 161

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F+   
Sbjct: 162 RQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ 
Sbjct: 222 NALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYA 279

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPI 297
           +  DI+   EN++  + ++     T+      I  +    R             D  NP+
Sbjct: 280 DYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWTRLHMVDAIKEHSGADFWNPM 339

Query: 298 IMHNVTEHFVHSEFRV 313
            +    E        +
Sbjct: 340 SVEEARELAKEHNVGI 355



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   +  E   I++  F+E   E+K I      +  P       K ND    
Sbjct: 345 RELAKEHNVGIKDTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDEDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|152969073|ref|YP_001334182.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238893514|ref|YP_002918248.1| lysyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|150953922|gb|ABR75952.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|218117880|dbj|BAH03311.1| lysyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238545830|dbj|BAH62181.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 505

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 75/364 (20%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDAKDNDELASLNVEVAVAGRMMTRRVMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G +++   +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDIIAARGKLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL  +   ++  + R++I+ +MR  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANEESRHTFRIRSQILATMRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +       V               YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKTEVP--------------YGDQVFD 319

Query: 293 LRNPII----MHNVTEHFVHSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P         + +H   +         +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKHRPETNMADLDNFDAAKALAESIGIQVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +         P       + ND+      +++    G EI +G    + +E   Q F
Sbjct: 381 EAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRF 440

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +   +K   ++           A + G+PP  G+  GIDR+VML   +  +R+V LFP 
Sbjct: 441 QDQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPA 500

Query: 565 SQ 566
            +
Sbjct: 501 MR 502


>gi|220927852|ref|YP_002504761.1| lysyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219998180|gb|ACL74781.1| lysyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 499

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 69/339 (20%), Positives = 126/339 (37%), Gaps = 23/339 (6%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           S  G    ++G +   R  G   F D++D  G  Q+    D    E+ +  +   +    
Sbjct: 58  SLEGQNASIAGRLMSKRGMGKAGFCDLQDRDGRIQLYVRKDEVGDEVYEMFKKYDI---- 113

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++    E        G+I +  ++I  L     LPLP          +R++ R++DL 
Sbjct: 114 GDIVGVQGEIF--KTHKGEISIKVKEIT-LLSKSLLPLPEKWHGLKDTDLRYRQRYVDLI 170

Query: 135 RDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
            +   KN  + R++II S+R  +    F+E  TP+L T      AR F+          Y
Sbjct: 171 VNPEVKNTFILRSKIIKSIRKFLDDRGFLEVDTPLLNTIPGGAAARPFITHHNTLDIDMY 230

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  G ++ +++   FR+E       P EF  +++  ++ +   ++  
Sbjct: 231 -LRIAPELYLKRLIVGGMEKVYEMGRMFRNEGMSVKHNP-EFTMMEVYEAYNDYKGMMEL 288

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            EN++  V  E      +      I                 N + M    + +   +F 
Sbjct: 289 TENLVSTVAMETLGTTKIQYQGQEIDLTPPW-----------NRMTMIEAVKEYTGIDFD 337

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-NEWARS 350
                       E   +  K G       + M  E+  S
Sbjct: 338 TIKTDEEAKAAAESKKVHVKEGMVRGEILNLMFEEFVES 376



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 27/192 (14%)

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL--GIINCNCFEFCWIM 438
               E   +  D    D     A +  K        R  I   +    +  N  +  +I 
Sbjct: 326 EAVKEYTGIDFDTIKTDEEAKAAAESKKVHVKEGMVRGEILNLMFEEFVESNLVQPTFIY 385

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D+P               +P T  +     L           +++    G E+ +     
Sbjct: 386 DYP------------VEISPLTKRKPDCPEL---------TERFEFFITGREMGNAYSEL 424

Query: 499 HMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      + F +    ++  +            A + GMPP GG+  G+DR+V+LL  + 
Sbjct: 425 NDPIDQKERFVSQVKKRDSGDEEANMMDEDYVTALEYGMPPTGGLGIGVDRLVILLTDSA 484

Query: 555 NVREVSLFPMSQ 566
           ++R++ LFP  +
Sbjct: 485 SIRDILLFPTMK 496


>gi|301156452|emb|CBW15923.1| lysine tRNA synthetase, inducible [Haemophilus parainfluenzae T3T1]
          Length = 502

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 67/289 (23%), Positives = 123/289 (42%), Gaps = 19/289 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F+ ++D  G  Q+    D+    + +     W L   G ++ 
Sbjct: 63  EVAVAGRIMTRRAMGKATFITLQDMSGKIQLYVARDNLPEGVYEEDVGSWDL---GDIIG 119

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL- 138
                      T ++ +   ++++L+ A   PLP           R++ R+LDL  +   
Sbjct: 120 VKGTLF--KTKTNELTIKTTEVQLLTKALR-PLPNKFHGLTDMEARYRQRYLDLISNEES 176

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            +  + R+++I  +R   I++ F+E  TP+L        AR F+          Y L  A
Sbjct: 177 RRTFIIRSKVIAGIREFFISKGFMEVETPMLQVIPGGASARPFITHHNALDVDMY-LRIA 235

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+++  E +L
Sbjct: 236 PELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNTEELL 294

Query: 258 RGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           R +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 295 RKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATIKYGADKGIVKEDL 343



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 12/180 (6%)

Query: 396 GDSCFFIAGDPLKFCSFAADA-RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            D+      D         D  R    A+ LGI     +    I++   +E   E   I 
Sbjct: 326 HDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQ 384

Query: 454 FAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                F M      S     ND       +++L   G EI +G    + +E   + F   
Sbjct: 385 PT---FLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQ 441

Query: 512 GISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 442 VAAKEAGDDEAMFKDDDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|294666712|ref|ZP_06731948.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|292603537|gb|EFF46952.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 505

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 68/302 (22%), Positives = 119/302 (39%), Gaps = 25/302 (8%)

Query: 5   RTHSCGDLGVSDV-------------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL                  G  VR++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPEALEASGRTVRMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              +           + +     G +++           TG++ + A  + +L+ +   P
Sbjct: 101 LQGNVLG-----DAYTAFKGWDVGDIVAVEGGL--TRTKTGELSVKASALRLLTKSLR-P 152

Query: 112 LPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP           R++ R++DL       +  +KR++II +MR  + A  F+E  TP++ 
Sbjct: 153 LPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPMMH 212

Query: 171 -ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   +  
Sbjct: 213 YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRH 271

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  L++  ++     I++  E V+R   +       VS +   I    A RR+  D
Sbjct: 272 NP-EFTMLELYEAYATYHQIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFRRWRMD 330

Query: 290 KP 291
           + 
Sbjct: 331 EA 332



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           + +D       +++L  NG E+A+G    +  E     F     +K+  ++         
Sbjct: 402 RSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMHFDADY 461

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 462 IRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|294624918|ref|ZP_06703573.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292600797|gb|EFF44879.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
          Length = 505

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 68/302 (22%), Positives = 119/302 (39%), Gaps = 25/302 (8%)

Query: 5   RTHSCGDLGVSDV-------------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL                  G  VR++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPEALEASGRTVRMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              +           + +     G +++           TG++ + A  + +L+ +   P
Sbjct: 101 LQGNVLG-----DAYTAFKGWDVGDIVAVEGGL--TRTKTGELSVKASALRLLTKSLR-P 152

Query: 112 LPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP           R++ R++DL       +  +KR++II +MR  + A  F+E  TP++ 
Sbjct: 153 LPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPMMH 212

Query: 171 -ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   +  
Sbjct: 213 YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRH 271

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  L++  ++     I++  E V+R   +       VS +   I    A RR+  D
Sbjct: 272 NP-EFTMLELYEAYATYHQIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFRRWRMD 330

Query: 290 KP 291
           + 
Sbjct: 331 EA 332



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           + +D       +++L  NG E+A+G    +  E     F     +K+  ++         
Sbjct: 402 RSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMHFDADY 461

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 462 IRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|17545747|ref|NP_519149.1| lysyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|39932228|sp|Q8Y0L5|SYK_RALSO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|17428041|emb|CAD14730.1| putative lysyl-trna synthetase (lysine--trna ligase) (lysrs)
           protein [Ralstonia solanacearum GMI1000]
          Length = 510

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 65/308 (21%), Positives = 120/308 (38%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL                  V L+G +   R  G   F  ++D  G  Q     D
Sbjct: 45  THHAADLHTRYSETDQPALEAANVEVALAGRMMLKRVMGKASFATVQDGSGQIQFYITRD 104

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               ++  + +   +  I       +A  +      G++ +  Q++ +LS +   PLP  
Sbjct: 105 RVGEDVYAAFKHWDLGDI------VAARGVLFRTNKGELSVQVQELRLLSKSLR-PLPDK 157

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + ++++ R++DL            RT+ I S+R  M    F+E  TP+L     
Sbjct: 158 FHGLADQEMKYRQRYVDLIVSPETRNTFRARTKAIASLRHHMSDAGFMEVETPMLHPIPG 217

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R ++I   FR+E   S R   E
Sbjct: 218 GAAAKPFITHHNALDMQMF-LRIAPELYLKRLIVGGFERVYEINRNFRNEGV-SPRHNPE 275

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIR 284
           F  ++   ++ +   +++  EN++R    + +             +S  F R+    AI+
Sbjct: 276 FTMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSAALNYQGRELDLSKPFHRLTICQAIQ 335

Query: 285 RYGTDKPD 292
           +Y     D
Sbjct: 336 KYAPQYTD 343



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +        P       +G+D L     +++L   G EIA+G    +  
Sbjct: 380 LFEETAESQLWEPT-FIVDYPVEVSPLARGSDTLPGITERFELFITGREIANGFSELNDP 438

Query: 502 EVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   + F      K+  +           RA + GMPP GG   GIDR+VMLL  + N+R
Sbjct: 439 EDQAERFRKQVEQKDAGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIR 498

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 499 DVILFP 504


>gi|42779156|ref|NP_976403.1| lysyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206977926|ref|ZP_03238813.1| lysyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217957653|ref|YP_002336195.1| lysyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222093847|ref|YP_002527896.1| lysyl-tRNA synthetase [Bacillus cereus Q1]
 gi|229136923|ref|ZP_04265551.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|229194467|ref|ZP_04321271.1| Lysyl-tRNA synthetase [Bacillus cereus m1293]
 gi|81411375|sp|Q73FD1|SYK_BACC1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226737092|sp|B7HPY8|SYK_BACC7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|42735071|gb|AAS39011.1| lysyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206743832|gb|EDZ55252.1| lysyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217064281|gb|ACJ78531.1| lysyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221237894|gb|ACM10604.1| lysyl-tRNA synthetase [Bacillus cereus Q1]
 gi|228589057|gb|EEK47071.1| Lysyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228646588|gb|EEL02794.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|324324067|gb|ADY19327.1| lysyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 499

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 60/316 (18%), Positives = 125/316 (39%), Gaps = 21/316 (6%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G+    ++      V ++G +   R  G   F  I+D +G  Q+    D+   E  +  +
Sbjct: 49  GEFSKEELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +    G ++    +    N+  G++ + A    +L+ +   PLP           R+
Sbjct: 109 TADL----GDLVGIEGKVFKTNV--GELSVKATGFTLLTKSLR-PLPDKYHGLKDVEQRY 161

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F+   
Sbjct: 162 RQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ 
Sbjct: 222 NALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYA 279

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPI 297
           +  DI+   EN++  + ++     T+      I  +    R             D  NP+
Sbjct: 280 DYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWTRLHMVDAIKEHSGADFWNPM 339

Query: 298 IMHNVTEHFVHSEFRV 313
            +    E        +
Sbjct: 340 SVEEARELAKEHNVEI 355



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   +  E   I++  F+E   E+K I      +  P       K ND    
Sbjct: 345 RELAKEHNVEIKDTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDEDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|289433583|ref|YP_003463455.1| lysyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289169827|emb|CBH26365.1| lysyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 498

 Score =  207 bits (527), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 143/373 (38%), Gaps = 28/373 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +    V ++G +   R  G + F  I+D +   Q+    D+   +     +   +  I
Sbjct: 56  LEEASIEVTVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKIADLGDI 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      +       TG++ + A +  +LS +   PLP           R++ R+LDL
Sbjct: 116 IGI------KGTIFRTNTGELSVKATEFTLLSKSLR-PLPDKYHGLKDVEQRYRQRYLDL 168

Query: 134 RRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +       V R++I+   R  M  + F+E  TP+L T +    A+ F+          
Sbjct: 169 ITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMEL 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++
Sbjct: 229 Y-LRIALELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMD 286

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +E ++  V E+ +                    Y  D       I M +  + +V  +F
Sbjct: 287 LVEGLVSTVCEQVNG-----------TTKITYGEYDVDLTPKWRRIHMADAVKEYVGVDF 335

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
              +     +   +   +P      +  +   +NE+  +  +  L    +     G+   
Sbjct: 336 WNVTSDEEAHQLAKEHNVPV---TKHMTYGHILNEFFETFVEEKLIQPTFVY---GHPVE 389

Query: 372 MGPVAKHLNIVNT 384
           + P+AK       
Sbjct: 390 ISPLAKKNKEDER 402



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + K  +       +++L   G E A+     +  
Sbjct: 368 FFETFVEEKLIQPTFVYGHPVEISPLAKKNKEDERF-TDRFELFIVGREHANAFSELNDP 426

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +   G       A + G+PP GG+  GIDR+VMLL  A ++R
Sbjct: 427 IDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIR 486

Query: 558 EVSLFPMSQNF 568
           ++ LFP  ++ 
Sbjct: 487 DILLFPTMKHR 497


>gi|227552660|ref|ZP_03982709.1| lysyl-tRNA synthetase [Enterococcus faecium TX1330]
 gi|257888628|ref|ZP_05668281.1| lysyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257897417|ref|ZP_05677070.1| lysyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293378825|ref|ZP_06624980.1| lysine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|227178189|gb|EEI59161.1| lysyl-tRNA synthetase [Enterococcus faecium TX1330]
 gi|257824682|gb|EEV51614.1| lysyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257833982|gb|EEV60403.1| lysyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|292642366|gb|EFF60521.1| lysine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 498

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 69/318 (21%), Positives = 130/318 (40%), Gaps = 32/318 (10%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            +++G    ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSEELHELFDPRTKEELAEMGLTASVAGRMMTRRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G     + + +     TG++ + A +I ILS A   PLP 
Sbjct: 100 DQVGDEAYEVFKHADL----GDFFGVTGQIM--KTDTGEVSIKASEITILSKALR-PLPD 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +       +KR++II+ +R  +    +IE  TP+L   +
Sbjct: 153 KYHGLTNIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYLDGNGYIEVETPVLHNEA 212

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 213 GGAAARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP- 270

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  L+   ++ + +D++N  E ++R   E+      ++          +F RI   DAI
Sbjct: 271 EFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAVDLESDFKRIHMVDAI 330

Query: 284 RRYGTDKPDLRNPIIMHN 301
           +       D    + +  
Sbjct: 331 KE--QTGVDFWKEMTLEE 346



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E+ +      +  P       K N        +++L   G E A+     +      + F
Sbjct: 377 EETLTQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFTELNDPIDQRERF 436

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +E+  +           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP 
Sbjct: 437 EAQEKERELGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPT 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|229083395|ref|ZP_04215745.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228699931|gb|EEL52566.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 499

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 62/314 (19%), Positives = 130/314 (41%), Gaps = 24/314 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   ++   V ++G +   R  G   F  ++D +G  Q+    D+   E  +  ++  +
Sbjct: 55  ELEEKEI--TVSIAGRIMTKRGKGKAGFAHVQDLHGQVQIYVRKDAVGDEQYELFKTADL 112

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               G ++    +    N+  G++ + A    +L+ A   PLP           R++ R+
Sbjct: 113 ----GDLVGIEGKVFKTNV--GELSVKATGFTLLTKALR-PLPDKYHGLKDVEQRYRQRY 165

Query: 131 LDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQ 188
           LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F+       
Sbjct: 166 LDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHHNALD 225

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  D
Sbjct: 226 MELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKD 283

Query: 249 ILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPIIM 299
           I+   EN++  + ++     T+            + R+   DAI++Y     D  NP+ +
Sbjct: 284 IMKLTENMIAHIAKQVLGTTTIQYGEQEINLEPEWTRLHMVDAIKQY--SGADFWNPMSV 341

Query: 300 HNVTEHFVHSEFRV 313
                        +
Sbjct: 342 EEARALAKEHGVEI 355



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 6/156 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E G+   +  E   I++  F+E   EE+ I      +  P       K ND    
Sbjct: 345 RALAKEHGVEIKDTMEVGHIIN-EFFEQKVEEELIQPT-FIYGHPVEISPLAKKNDEDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++  
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQ 498


>gi|147921302|ref|YP_684884.1| aspartyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|110620280|emb|CAJ35558.1| aspartyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 434

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 91/337 (27%), Positives = 145/337 (43%), Gaps = 36/337 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RTH   D+     G  V +SGWVH +R  GG+ FL +RD  G+ QV         EI 
Sbjct: 1   MKRTHYSKDITPEMNGDAVIVSGWVHEIRDFGGLAFLILRDRAGLVQVTMPKKKVPKEII 60

Query: 63  KSVR---SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGER 118
            +V+    E V+ I G V + +             EL   +IE+LS+AE   PL   G+ 
Sbjct: 61  DTVKGLSRESVVSIGGTVKAEAK-------APNGYELIPTEIEVLSIAETPLPLDPTGKV 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                 R   RF+D+R   +      R  +I ++R  + A   +E +TP + A++ EG  
Sbjct: 114 PAELDTRLDARFMDIRSPEVTAIFTIRAHMIKAVRDFLSANGCLEIATPKIVATATEGGT 173

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                S  ++ +F  L Q+PQ YKQ++MA+G DR ++I P FR E+  + +   E   +D
Sbjct: 174 ALFPISYFDREAF--LNQSPQLYKQMMMAAGMDRVYEIGPIFRAEEHATRKHLNEATSID 231

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRI--------- 277
           +E+SF   +D +  +EN +  V+                        F R+         
Sbjct: 232 VELSFATHEDAMILLENTIAYVYNYVKEHCASQLKVLNIDLQVPKTPFRRVPYTEAVEIA 291

Query: 278 --CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
               + A    G D       +I   + EH+   ++ 
Sbjct: 292 KTSPECAHLELGDDLDTAAEHVIGETIGEHYFIVDWP 328



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 29/156 (18%)

Query: 416 ARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           A   +  +L      +I     E  +I+D+P                 F           
Sbjct: 298 AHLELGDDLDTAAEHVIGETIGEHYFIVDWP------------TNIRAFYSQAYDDR--- 342

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
                  KA  +DL+    E++SG  R H  + +++   +  ++     + F     +F+
Sbjct: 343 ---PEVCKA--FDLMHPRMELSSGAQREHRVDKLIKNLEDRDLNP----DSFKFYLDSFR 393

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GMPPH G   G +R++  +L   NVRE  LFP  +
Sbjct: 394 YGMPPHAGWGLGAERLLQTMLNLNNVREAVLFPRDR 429


>gi|311280819|ref|YP_003943050.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308750014|gb|ADO49766.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 506

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 76/364 (20%), Positives = 136/364 (37%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L           +  +   V ++G +   R  G   F+ ++D  G  Q+ A  
Sbjct: 43  RDHTSDQLHSEFDAKENEELESLNVEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYAAR 102

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G +++   +       TG++ +   ++ +L+ A   PLP 
Sbjct: 103 DDLPEGVYNDRFKKWDL---GDIIAARGKLF--KTKTGELSIHCTELRLLTKALR-PLPD 156

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R+LDL   D        R++I+  MR  M+   F+E  TP++    
Sbjct: 157 KFHGLQDQEARYRQRYLDLIANDESRNTFKIRSQILAGMRKFMVGRGFMEVETPMMQVIP 216

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 217 GGASARPFITHHNALDMDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 274

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + ++      V               YG    D
Sbjct: 275 EFTMMELYMAYADYKDLIELTESLFRTLAQDVLGKTEVP--------------YGEHTFD 320

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEW 347
              P +   + E             L      +  A        K  G  R   +  +E 
Sbjct: 321 FGKPFVKLTMREAIKKYRPETNMADLDNFDAAKAIAESIGIHVEKSWGLGRIVTEIFDEV 380

Query: 348 ARSQ 351
           A + 
Sbjct: 381 AEAH 384



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 68/194 (35%), Gaps = 21/194 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   +M D D+      D  K  + +       +  LG I    F+
Sbjct: 324 PFVKLTMREAIKKYRPETNMADLDNF-----DAAKAIAESIGIHVEKSWGLGRIVTEIFD 378

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 379 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 426

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F +   +K   ++           A + G+PP  G+  GIDR+VML
Sbjct: 427 GFSELNDAEDQAQRFLDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 486

Query: 550 LLGAKNVREVSLFP 563
              +  +R+V LFP
Sbjct: 487 FTNSHTIRDVILFP 500


>gi|323465359|gb|ADX77512.1| lysyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 495

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 138/373 (36%), Gaps = 26/373 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   +  S   ++G +   R  G   F  I+D  G  Q+    D           +  +
Sbjct: 51  ELAEKETESHTVIAGRIMTKRGKGKAGFAHIQDLSGQIQIYVRKDQVGDAQFGIWNTADL 110

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             I G+      E I     TG++ + A+  ++LS A   PLP           R++ R+
Sbjct: 111 GDIVGV------EGIMFKTNTGELSVKAKSFKLLSKALR-PLPDKHHGLQDIEQRYRQRY 163

Query: 131 LDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDL  +         R+RI+  MR  +  + F+E  TP++   +   A    V       
Sbjct: 164 LDLITNEESTQTFINRSRILQEMRNYLNEKGFLEVETPMMHQIAGGAAAKPFVTHHNALD 223

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI
Sbjct: 224 ATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDI 282

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++  E ++  +        +V      I  +   RR             M +  +     
Sbjct: 283 MSLTEELVAHIARRVLGTTSVQYGDETINLEPQWRRLH-----------MVDAVKEATGV 331

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
           +   F ++ S    +E+          N  +   +NE+   + +  L    +     G+ 
Sbjct: 332 D---FYEVKSDKEAHELAKAHGIEVDDNMKYGHILNEFFEQKVEETLIQPTFIY---GHP 385

Query: 370 AGMGPVAKHLNIV 382
             + P+AK     
Sbjct: 386 IEISPLAKKNPED 398



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F       +  L   +    +   +++L   G E A+     +
Sbjct: 366 FFEQKVEETLIQPT---FIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELN 422

Query: 500 MSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 Q F    + KE               A + GMPP GG+  GIDR+VMLL  + +
Sbjct: 423 DPIDQRQRFEAQLVEKEQGNDEAHEMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTNSPS 482

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  + 
Sbjct: 483 IRDVLLFPYMRQ 494


>gi|114320955|ref|YP_742638.1| lysyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227349|gb|ABI57148.1| lysyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 499

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 62/294 (21%), Positives = 119/294 (40%), Gaps = 21/294 (7%)

Query: 9   CGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           C +L    +      VR++G +   R  G   F  ++D  G  Q+    D     + +  
Sbjct: 46  CAELDDEALEAENIRVRVAGRMMAKRVMGKASFTHLQDQSGRIQLFLARDELPEGVYQQF 105

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           +   V  I G      A         G++ +   ++ +L+ +   PLP           R
Sbjct: 106 KGWDVGDIIG------AAGTLFRTRKGELSVKVDELRLLTKSLR-PLPEKYHGLTDTEAR 158

Query: 126 FKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           ++ R++DL  +    +  + R+R++  +R  +    F+E  TP++            V  
Sbjct: 159 YRQRYVDLIMNDDSRRVFMLRSRLVAGIRDFLNGRGFLEVETPMMQPIPGGATARPFVTH 218

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
               G+   L  AP+ Y + L+  GF++ ++I   FR+E   +   P EF  L+   ++ 
Sbjct: 219 HNALGADLYLRVAPELYLKRLVVGGFEQVYEINRNFRNEGVSTRHNP-EFTMLEFYQAYA 277

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTD 289
           + +D+++  E +LR + EE      ++           F RI   DAI  +  D
Sbjct: 278 DHNDLMDLTEAMLRRLAEEQLGTTQITYQGETFDFGRPFRRIRMVDAICEFNPD 331



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P+      +  D       +++L+  G EIA+G    + +E   + F
Sbjct: 373 EHKLREPTFVTHYPKEVSPLARPVDDDPFYTERFELIVGGREIANGFSELNDAEDQAERF 432

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 K   ++          RA + G+PP  G   GIDR+VML   A ++R+V LFP 
Sbjct: 433 RAQAAEKAAGDDEAMHYDADFIRALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVLLFPA 492

Query: 565 SQ 566
            +
Sbjct: 493 MR 494


>gi|218901279|ref|YP_002449113.1| lysyl-tRNA synthetase [Bacillus cereus AH820]
 gi|226737089|sp|B7JK84|SYK_BACC0 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|218535399|gb|ACK87797.1| lysyl-tRNA synthetase [Bacillus cereus AH820]
          Length = 499

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 60/316 (18%), Positives = 125/316 (39%), Gaps = 21/316 (6%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G+    ++      V ++G +   R  G   F  I+D +G  Q+    D+   E  +  +
Sbjct: 49  GEFSKEELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +    G ++    +    N+  G++ + A    +L+ +   PLP           R+
Sbjct: 109 TADL----GDLVGIEGKVFKTNV--GELSVKATGFTLLTKSLR-PLPDKYHGLKDVEQRY 161

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F+   
Sbjct: 162 RQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ 
Sbjct: 222 NALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYA 279

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPI 297
           +  DI+   EN++  + ++     T+      I  +    R             D  NP+
Sbjct: 280 DYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPKWTRLHMVDAIKEHSGADFWNPM 339

Query: 298 IMHNVTEHFVHSEFRV 313
            +    E        +
Sbjct: 340 SVEEARELAKEHNVEI 355



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   +  E   I++  F+E   E+K I      +  P       K ND    
Sbjct: 345 RELAKEHNVEIKDTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDEDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|94270667|ref|ZP_01291795.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
 gi|93450711|gb|EAT01789.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
          Length = 495

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 64/293 (21%), Positives = 117/293 (39%), Gaps = 15/293 (5%)

Query: 6   THSCGDL------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           +H   +L        +  G    ++G +  +R  G   FL ++D  G  QV    D    
Sbjct: 37  SHRIKELLPGPDPEAALAGGNKAVAGRIMALRRFGKAAFLHLQDSSGRIQVHVKRDEIGQ 96

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +   + +   V    G + + S         TG++ + A  +++L+ +   PLP      
Sbjct: 97  QAYATFKKFDV----GDIAAFSGPLFRTK--TGEVTIQALSVKLLTKSLR-PLPEKFHGL 149

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRT-RIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                R++ R++DL  +   ++  +R   II  +R  +    F+E  TP++ A +     
Sbjct: 150 TDIETRYRQRYVDLMVNPEVRDTFRRRVEIIRLVRDFLTNRGFLEVETPMMQAIAGGATA 209

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                     G    L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  L+
Sbjct: 210 KPFKTHHNALGLDLYLRIAPELYLKRLLVGGFERVFEINRNFRNEGLSTRHNP-EFTMLE 268

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
              ++   D+++   E +L  V  E      +S     +      RRY  D+ 
Sbjct: 269 FYQAYATYDELMELAEEMLSWVAMEVCGTMQISYQGQEVDLAPPWRRYTMDEA 321



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 7/127 (5%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
            +E   E+K ID      T     +  L + N        +++L   G E+A+     + 
Sbjct: 363 LFELLVEDKLIDPTF--ITAYPTEVSPLARRNQENPEITDRFELFITGREMANAFSELND 420

Query: 501 SEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
            +   Q        +   E  F        RA + GMPP  G   GIDR+ MLL  A ++
Sbjct: 421 PDDQRQRLEKQIAERGSDEEIFPVLDEDFLRALEYGMPPAAGCGVGIDRLTMLLTDAPSI 480

Query: 557 REVSLFP 563
           R+V LFP
Sbjct: 481 RDVILFP 487


>gi|257882590|ref|ZP_05662243.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257886012|ref|ZP_05665665.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257891705|ref|ZP_05671358.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894180|ref|ZP_05673833.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260559536|ref|ZP_05831717.1| lysyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206687|ref|ZP_05921385.1| lysyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289565049|ref|ZP_06445503.1| lysyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293553702|ref|ZP_06674326.1| lysyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|293563203|ref|ZP_06677659.1| lysyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|293570125|ref|ZP_06681205.1| lysyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294614890|ref|ZP_06694781.1| lysyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294623714|ref|ZP_06702547.1| lysyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314938205|ref|ZP_07845505.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314943100|ref|ZP_07849899.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314949297|ref|ZP_07852640.1| lysyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314952230|ref|ZP_07855245.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314992088|ref|ZP_07857538.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314996271|ref|ZP_07861327.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|257818248|gb|EEV45576.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257821868|gb|EEV48998.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257828065|gb|EEV54691.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830559|gb|EEV57166.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260074635|gb|EEW62956.1| lysyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260079180|gb|EEW66873.1| lysyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289163256|gb|EFD11102.1| lysyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291587497|gb|EFF19381.1| lysyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291592176|gb|EFF23794.1| lysyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291596929|gb|EFF28147.1| lysyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291602277|gb|EFF32505.1| lysyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291604853|gb|EFF34331.1| lysyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313589515|gb|EFR68360.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313593302|gb|EFR72147.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313595625|gb|EFR74470.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313598159|gb|EFR77004.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313642401|gb|EFS06981.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313644303|gb|EFS08883.1| lysyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 498

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 69/318 (21%), Positives = 130/318 (40%), Gaps = 32/318 (10%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            +++G    ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSEELHELFDPRTKEELAEMGLTASVAGRMMTRRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G     + + +     TG++ + A +I ILS A   PLP 
Sbjct: 100 DQVGDEAYEVFKHADL----GDFFGVTGQIM--KTDTGEVSIKASEITILSKALR-PLPD 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +       +KR++II+ +R  +    +IE  TP+L   +
Sbjct: 153 KYHGLTNIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYLDGNGYIEVETPVLHNEA 212

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 213 GGAAARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP- 270

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  L+   ++ + +D++N  E ++R   E+      ++          +F RI   DAI
Sbjct: 271 EFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAVDLESDFKRIHMVDAI 330

Query: 284 RRYGTDKPDLRNPIIMHN 301
           +       D    + +  
Sbjct: 331 KE--QTGVDFWQEMTLEE 346



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E+ +      +  P       K N        +++L   G E A+     +      + F
Sbjct: 377 EETLTQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFTELNDPIDQRERF 436

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +E+  +           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP 
Sbjct: 437 EAQEKERELGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPT 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|197301309|ref|ZP_03166394.1| hypothetical protein RUMLAC_00040 [Ruminococcus lactaris ATCC
           29176]
 gi|197299627|gb|EDY34142.1| hypothetical protein RUMLAC_00040 [Ruminococcus lactaris ATCC
           29176]
          Length = 693

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 64/286 (22%), Positives = 130/286 (45%), Gaps = 19/286 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +I+D  G  QV    D+   +     +   +  I GL    
Sbjct: 105 VAIAGRMMFKRVMGKASFCNIQDLQGNIQVYVARDAIGTDSYADFKKSDIGDIFGL---- 160

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E       TG+I + A+K+ +LS + ++ LP           R++ R++DL  ++  K
Sbjct: 161 --EGFAFRTRTGEISIHAEKMTLLSKSLQM-LPEKFHGLTDTDTRYRQRYVDLIMNSDTK 217

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           +  +KR++I++++R  +  + F+E  TP+L A++   A                L  + +
Sbjct: 218 DTFIKRSKILSAIRKYLSGKGFMEVETPMLVANAGGAAARPFETHFNALNEDLKLRISLE 277

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +   +++  EN+ R 
Sbjct: 278 LYLKRLIVGGLEKVYEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYHGMMDLTENLYRF 336

Query: 260 VFEEFSNGNTVSN---------NFLRICYDDAIRRY-GTDKPDLRN 295
           V +E      +            F RI   DA+++Y G D  ++++
Sbjct: 337 VAQEVLGTTHIVYKGIEMDLGKPFERITMVDAVKKYAGVDWNEVKD 382



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 72/201 (35%), Gaps = 34/201 (16%)

Query: 417 RNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           R+     L +     +  +  +  ++MD P               +P T  +        
Sbjct: 400 RHKKGDILNLFFEEYVEEHLLQPTFVMDHP------------IEISPLTKKKPENPEY-- 445

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYR 527
                    +++   NG+E+A+     +      + F          ++           
Sbjct: 446 -------VERFEFFMNGWEMANAYSELNDPIDQRERFKAQEELLAQGDDEANTTDEDFMN 498

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMGSPSTVSVEQLRE 586
           A + GMPP GGI  GIDR+ MLL GA+ +R+V LFP  ++   D      S  +  +  +
Sbjct: 499 ALEIGMPPTGGIGFGIDRMCMLLTGAEAIRDVLLFPTMKSIGADKQENKASKSNEAEKCD 558

Query: 587 LGLRIVENPKKILKISVTTIL 607
              +I    +KI   +V    
Sbjct: 559 ---QIATKEEKIDFSNVKIEP 576


>gi|161524327|ref|YP_001579339.1| lysyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189350917|ref|YP_001946545.1| lysyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|238687033|sp|A9AGV1|SYK_BURM1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|160341756|gb|ABX14842.1| lysyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189334939|dbj|BAG44009.1| class II lysyl-tRNA synthetase [Burkholderia multivorans ATCC
           17616]
          Length = 508

 Score =  207 bits (526), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 66/308 (21%), Positives = 118/308 (38%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   +L      S           V ++G +   R  G   F  ++D  G  Q    P+
Sbjct: 43  THRAAELQAKFAESDKEALEANPFEVAVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPN 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +LS A   PLP  
Sbjct: 103 DVGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVKCTELRLLSKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + +R++ R++DL            RT+ I S+R  M    F+E  TP+L     
Sbjct: 156 FHGLSDQEMRYRQRYVDLIVTPETRDTFRARTKTIASIRKFMSDAEFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T+            F R+    AI+
Sbjct: 274 FTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFHRLTITQAIQ 333

Query: 285 RYGTDKPD 292
           +Y     D
Sbjct: 334 KYAPQYTD 341



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 60/163 (36%), Gaps = 27/163 (16%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
            P    +     +  + +E        +E  +I+D+P                       
Sbjct: 363 QPAFLNAGIGALQLALFEE--TAESQLWEPTFIIDYP---------------------VE 399

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF-- 522
                + +D +     +++L   G EIA+G    +  E     F      K+  +     
Sbjct: 400 VSPLARASDTVPGITERFELFITGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMY 459

Query: 523 --GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 RA + GMPP GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 460 FDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|228989284|ref|ZP_04149277.1| Lysyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|229003090|ref|ZP_04160942.1| Lysyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228758173|gb|EEM07366.1| Lysyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228770494|gb|EEM19065.1| Lysyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 497

 Score =  207 bits (526), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 66/330 (20%), Positives = 134/330 (40%), Gaps = 32/330 (9%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT+S  +L           + + G  V ++G +   R  G   F  I+D +G  Q+    
Sbjct: 37  RTNSTEELLNLYGEFSKEELEEKGISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +   +  +    G ++    +    N+  G++ + A    +L+ A   PLP 
Sbjct: 97  DAVGDEQYELFNTADL----GDLVGIEGKVFKTNV--GELSVKATGFTLLTKALR-PLPD 149

Query: 115 FGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                     R++ R+LDL       +  V R++II  MR  +    ++E  TP++ A +
Sbjct: 150 KYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIA 209

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 210 GGASARPFITHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  +++  ++ +  DI+   EN++  + ++     T+            + R+   DAI
Sbjct: 268 EFTMIELYEAYADYKDIMKLTENMIAHIAKQVLGTTTIQYGEQEINLEPEWTRLHMVDAI 327

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           ++Y     D  +P+ +             +
Sbjct: 328 KQY--SGADFWSPMSVEEARALAKEHGVEI 355



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 73/193 (37%), Gaps = 7/193 (3%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
                         +   D+    +G          +AR  +A+E G+   +  E   I+
Sbjct: 307 YGEQEINLEPEWTRLHMVDAIKQYSGADFWSPMSVEEAR-ALAKEHGVEIKDTMEVGHII 365

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           +  F+E   EEK I      +  P       K ND       +++L     E A+     
Sbjct: 366 N-EFFEQKVEEKLIQPT-FIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTEL 423

Query: 499 HMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      + F      +E   +           A + GMPP GG+  GIDR+VMLL  A 
Sbjct: 424 NDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAP 483

Query: 555 NVREVSLFPMSQN 567
           ++R+V LFP  ++
Sbjct: 484 SIRDVLLFPAMRH 496


>gi|206580188|ref|YP_002239893.1| lysyl-tRNA synthetase LysS homolog [Klebsiella pneumoniae 342]
 gi|288936730|ref|YP_003440789.1| lysyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|290510214|ref|ZP_06549584.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|206569246|gb|ACI11022.1| lysyl-tRNA synthetase LysS homolog [Klebsiella pneumoniae 342]
 gi|288891439|gb|ADC59757.1| lysyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|289776930|gb|EFD84928.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 505

 Score =  207 bits (526), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 75/364 (20%), Positives = 140/364 (38%), Gaps = 39/364 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHAEFDAKDNDELASLNVEVAVAGRMMTRRVMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     +      +W L   G +++   +       TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DDLPEGVYNEQFKKWDL---GDIIAARGKLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL  +   ++  + R++I+ +MR  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANEESRHTFRIRSQILATMRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M++ +  D++   E++ R + +       V               YG    D
Sbjct: 274 EFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKTEVP--------------YGDQVFD 319

Query: 293 LRNPII----MHNVTEHFVHSEFRVFSKILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEW 347
              P         + +H   +         +     E   I   K  G  R   +  +E 
Sbjct: 320 FGKPFEKLTMREAIKKHRPETNMADLDNFDAAKALAESLGIQVEKSWGLGRIVTEIFDEV 379

Query: 348 ARSQ 351
           A + 
Sbjct: 380 AEAH 383



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 70/197 (35%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   +M D D+      D  K  + +   +   +  LG I    F+
Sbjct: 323 PFEKLTMREAIKKHRPETNMADLDNF-----DAAKALAESLGIQVEKSWGLGRIVTEIFD 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 378 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 425

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F +   +K   ++           A + G+PP  G+  GIDR+VML
Sbjct: 426 GFSELNDAEDQAQRFQDQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMVML 485

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 486 FTNSHTIRDVILFPAMR 502


>gi|147669196|ref|YP_001214014.1| lysyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|289432464|ref|YP_003462337.1| lysyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|189082959|sp|A5FRN5|SYK_DEHSB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|146270144|gb|ABQ17136.1| lysyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|288946184|gb|ADC73881.1| lysyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 498

 Score =  207 bits (526), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 76/298 (25%), Positives = 138/298 (46%), Gaps = 27/298 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRS 67
           +   + +   ++L+G +   R  G I F+DIRD  G  Q+     + D A  E+ K +  
Sbjct: 46  ETQENHLKEVLKLAGRIMTRRDMGKISFMDIRDGSGKMQIFFRQNDLDEASIELLKDLDL 105

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
              + ++G +M            TG+  L+A K+ +LS +  LPLP           R++
Sbjct: 106 GDFIGVEGSLMRT---------RTGEPSLAATKVSMLSKSL-LPLPEKWHGLQDVEKRYR 155

Query: 128 YRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSR 185
            R+LDL  +   +     R+R+I+ +R  M A+ F+E  TP+L   +    AR F+   +
Sbjct: 156 QRYLDLISNADARQTFLTRSRVISVIRAFMNAKGFLEVETPVLQPEAGGALARPFITHHQ 215

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                FY +  A + + + L+  GFDR ++I   FR+E   +   P EF  ++   ++  
Sbjct: 216 ALNCDFY-MRIALELHLKRLIVGGFDRVYEIGRIFRNEGISTRHNP-EFTMMESYQAYAN 273

Query: 246 QDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY-GTDKPDL 293
             D+++ +E ++  V +E S G            +  + R+   DA+++Y G D  D 
Sbjct: 274 YKDVMDFLEEMVSSVVKEISGGYTLPFGDITLDFTPPWPRLTMRDAVKQYAGIDFFDF 331



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 9/123 (7%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM-----LQAFSNV 511
           +P  M    +   K  D       +++ +C   EIA+     +           Q     
Sbjct: 379 HPVAMSP--LAKQKPEDPR--LTERFEAICANMEIANAFSELNDPVEQRARFKEQLEKRS 434

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            +  +  E+       A   GMPP GG+  GIDR+VML     ++REV LFP  ++  D 
Sbjct: 435 QLRTDESESVDEDFLAALAYGMPPTGGLGVGIDRLVMLFTNHDSIREVILFPALKDREDT 494

Query: 572 LMG 574
              
Sbjct: 495 KTQ 497


>gi|229067841|ref|ZP_04201159.1| Lysyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228715325|gb|EEL67183.1| Lysyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 499

 Score =  207 bits (526), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 60/318 (18%), Positives = 130/318 (40%), Gaps = 25/318 (7%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G+    ++      V ++G +   R  G   F  ++D +G  Q+    D+   +  +  +
Sbjct: 49  GEFSKEELEEKEIAVSIAGRIMTKRGKGKAGFAHVQDLHGQVQIYVRKDAVGDDEYELFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +    G ++    +    N+  G++ + A    +L+ +   PLP           R+
Sbjct: 109 TADL----GDLVGIEGKVFKTNV--GELSVKATGFTLLTKSLR-PLPDKYHGLKDVEQRY 161

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F    
Sbjct: 162 RQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFTTHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ 
Sbjct: 222 NALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYA 279

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRN 295
           +  DI+   E+++  + ++     T+            + R+   DAI++Y     D  N
Sbjct: 280 DYKDIMKLTEDMVAHIAKKVLGTTTIQYGDYEINLEPEWTRLHMVDAIKQY--SGADFWN 337

Query: 296 PIIMHNVTEHFVHSEFRV 313
           P+ +    E        +
Sbjct: 338 PMSIEEARELAKEHNVEI 355



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   +  E   I++  F+E   E+K I      +  P       K ND    
Sbjct: 345 RELAKEHNVEIKDTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDEDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|228995467|ref|ZP_04155137.1| Lysyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228764328|gb|EEM13205.1| Lysyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 497

 Score =  207 bits (526), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 66/330 (20%), Positives = 133/330 (40%), Gaps = 32/330 (9%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT+S  +L           + + G  V ++G +   R  G   F  I+D +G  Q+    
Sbjct: 37  RTNSTEELLNLYGEFSKEELEEKGISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +   +  +    G ++    +    N+  G++ + A    +L+ A   PLP 
Sbjct: 97  DAVGDEQYELFNTADL----GDLVGIEGKVFKTNV--GELSVKATGFTLLTKALR-PLPD 149

Query: 115 FGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                     R++ R+LDL       +  V R++II  MR  +    ++E  TP++ A +
Sbjct: 150 KYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIA 209

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 210 GGASARPFITHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  +++  ++ +  DI+   EN++  + +      T+            + R+   DAI
Sbjct: 268 EFTMIELYEAYADYKDIMKLTENMIAHIAKRVLGTTTIQYGEQEINLEPEWTRLHMVDAI 327

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           ++Y     D  +P+ +             +
Sbjct: 328 KQY--SGADFWSPMSVEEARALAKEHGVEI 355



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 73/193 (37%), Gaps = 7/193 (3%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
                         +   D+    +G          +AR  +A+E G+   +  E   I+
Sbjct: 307 YGEQEINLEPEWTRLHMVDAIKQYSGADFWSPMSVEEAR-ALAKEHGVEIKDTMEVGHII 365

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           +  F+E   EEK I      +  P       K ND       +++L     E A+     
Sbjct: 366 N-EFFEQKVEEKLIQPT-FIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTEL 423

Query: 499 HMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      + F      +E   +           A + GMPP GG+  GIDR+VMLL  A 
Sbjct: 424 NDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAP 483

Query: 555 NVREVSLFPMSQN 567
           ++R+V LFP  ++
Sbjct: 484 SIRDVLLFPAMRH 496


>gi|257899976|ref|ZP_05679629.1| lysyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|293571081|ref|ZP_06682122.1| lysyl-tRNA synthetase [Enterococcus faecium E980]
 gi|257837888|gb|EEV62962.1| lysyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|291608864|gb|EFF38145.1| lysyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 498

 Score =  207 bits (526), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 68/318 (21%), Positives = 130/318 (40%), Gaps = 32/318 (10%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            +++G    ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSEELHELFDPRTKEELAEMGLTASVAGRMMTRRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G     + + +     TG++ + A +I ILS A   PLP 
Sbjct: 100 DQVGDEAYEVFKHADL----GDFFGVTGQIM--KTDTGEVSIKASEITILSKALR-PLPD 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +       +KR++II+ +R  +    +IE  TP+L   +
Sbjct: 153 KYHGLTNIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYLDGNGYIEVETPVLHNEA 212

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 213 GGAAARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP- 270

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  L+   ++ + +D++N  E ++R   ++      ++          +F RI   DAI
Sbjct: 271 EFTMLEAYTAYTDFNDVMNLTEGIIRNAAQKVLGTAKITYDGQAVDLESDFKRIHMVDAI 330

Query: 284 RRYGTDKPDLRNPIIMHN 301
           +       D    + +  
Sbjct: 331 KE--QTGVDFWKEMTLEE 346



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E+ +      +  P       K N        +++L   G E A+     +      + F
Sbjct: 377 EETLTQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFTELNDPIDQRERF 436

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +E+  +           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP 
Sbjct: 437 EAQEKERELGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPT 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|225181740|ref|ZP_03735179.1| lysyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167611|gb|EEG76423.1| lysyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 487

 Score =  207 bits (526), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 64/356 (17%), Positives = 142/356 (39%), Gaps = 31/356 (8%)

Query: 6   THSCGDL---GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---F 59
           TH   D+        G  V L+G +  VR HG   F +++D  G  Q+    D      +
Sbjct: 34  THYAADVIGRFDELDGQSVTLAGRLMTVRAHGKASFANLQDESGQIQIYVRLDDVGQRTY 93

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           ++ + +    ++ + G V              G++ ++ +++++L+ +   PLP      
Sbjct: 94  DVFELLDIGDIVGLTGDVFRTRR---------GEVTVAVKELQLLAKSLR-PLPEKWHGL 143

Query: 120 YPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
               +R++ R+LD+  +  + K  V R++I+  +R  + ++ F+E  TP++   +    A
Sbjct: 144 TNVDMRYRQRYLDMIVNPDVKKTFVLRSKIVQEIRNFLNSDGFLEVETPVMHTLAGGASA 203

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F+        + Y L  A + + + L+  G D+ +++   FR+E   +   P EF  +
Sbjct: 204 KPFITHHNALDMNLY-LRIATELHLKRLVVGGMDKVYELGRIFRNEGISTKHNP-EFTSV 261

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGT 288
           ++  +  + +D++   E ++  V ++      V            + R+   +AI +Y  
Sbjct: 262 EIYQAQADYEDMMTLTEELITTVAQKVLGTLKVPYQEQELDLTSPWPRLTMVEAIEKYA- 320

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
              +  N        E        V +         E++    +G      F    
Sbjct: 321 -GINFNNIQTAEEAREAAKQKGLEVKAGTSRGEIMNELFEEFVEGQLFQPTFIMDY 375



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 62/157 (39%), Gaps = 27/157 (17%)

Query: 413 AADARNHIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           A  +R  I  EL    +    F+  +IMD+P                   +    +   K
Sbjct: 346 AGTSRGEIMNELFEEFVEGQLFQPTFIMDYP-------------------IEVSPLAKKK 386

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLY 526
            +D      ++++      EIA+     +      + F    + +E  +           
Sbjct: 387 ADDPS--MTYRFEAFMARSEIANAFTELNDPLDQRERFEQQVLKREAGDEEAHMLDEDFL 444

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            + + GMPP GG+  GIDR++M+L  + ++R+V LFP
Sbjct: 445 LSLEYGMPPTGGLGIGIDRLIMMLTDSPSIRDVILFP 481


>gi|313639775|gb|EFS04521.1| lysyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 498

 Score =  207 bits (526), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 143/373 (38%), Gaps = 28/373 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +    V ++G +   R  G + F  I+D +   Q+    D+   +     +   +  I
Sbjct: 56  LEEASIEVTVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKIADLGDI 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      +       TG++ + A +  +LS +   PLP           R++ R+LDL
Sbjct: 116 IGI------KGTIFRTNTGELSVKATEFTLLSKSLR-PLPDKYHGLKDVEQRYRQRYLDL 168

Query: 134 RRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +       V R++I+   R  M  + F+E  TP+L T +    A+ F+          
Sbjct: 169 ITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMEL 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++
Sbjct: 229 Y-LRIALELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMD 286

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +E ++  V E+ +                    Y  D       I M +  + +V  +F
Sbjct: 287 LVEGLVSTVCEQVNG-----------TTKITXXEYDVDLTPKWRRIHMADAVKEYVGVDF 335

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
              +     +   +   +P      +  +   +NE+  +  +  L    +     G+   
Sbjct: 336 WNVTSDEEAHQLAKEHNVPV---TKHMTYGHILNEFFETFVEEKLIQPTFVY---GHPVE 389

Query: 372 MGPVAKHLNIVNT 384
           + P+AK       
Sbjct: 390 ISPLAKKNKEDER 402



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + K  +       +++L   G E A+     +  
Sbjct: 368 FFETFVEEKLIQPTFVYGHPVEISPLAKKNKEDERF-TDRFELFIVGREHANAFSELNDP 426

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +   G       A + G+PP GG+  GIDR+VMLL  A ++R
Sbjct: 427 IDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIR 486

Query: 558 EVSLFPMSQNF 568
           ++ LFP  ++ 
Sbjct: 487 DILLFPTMKHR 497


>gi|47570201|ref|ZP_00240855.1| lysyl-tRNA synthetase [Bacillus cereus G9241]
 gi|228983332|ref|ZP_04143546.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|47553145|gb|EAL11542.1| lysyl-tRNA synthetase [Bacillus cereus G9241]
 gi|228776446|gb|EEM24798.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 499

 Score =  207 bits (526), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 60/316 (18%), Positives = 125/316 (39%), Gaps = 21/316 (6%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G+    ++      V ++G +   R  G   F  I+D +G  Q+    D+   E  +  +
Sbjct: 49  GEFSKEELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +    G ++    +    N+  G++ + A    +L+ +   PLP           R+
Sbjct: 109 TADL----GDLVGIEGKIFKTNV--GELSVKATGFTLLTKSLR-PLPDKYHGLKDVEQRY 161

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F+   
Sbjct: 162 RQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ 
Sbjct: 222 NALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYA 279

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPI 297
           +  DI+   EN++  + ++     T+      I  +    R             D  NP+
Sbjct: 280 DYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWTRLHMVDAIKEHSGADFWNPM 339

Query: 298 IMHNVTEHFVHSEFRV 313
            +    E        +
Sbjct: 340 SVEEARELAKEHNVEI 355



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   +  E   I++  F+E   E+K I      +  P       K ND    
Sbjct: 345 RELAKEHNVEIKDTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDEDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|227512327|ref|ZP_03942376.1| lysyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227084502|gb|EEI19814.1| lysyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 501

 Score =  207 bits (526), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 75/394 (19%), Positives = 150/394 (38%), Gaps = 39/394 (9%)

Query: 2   HRY-RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RT+    L             ++   V ++G +   R  G + F D++D  G  Q+
Sbjct: 31  HRFQRTYLATQLHDEFDKTDKDDLMNLNKKVTVAGRMMAKRGKGKVGFADLKDRTGKIQI 90

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    +I    +   +    G  +  S + I  ++  G++ + A+ +  LS A   
Sbjct: 91  YVRKDIVGDDIYHIFKRSDI----GDHLGISGQIIKTDM--GELTVRAESVTFLSKALR- 143

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP        +  +++ R+LDL  +        KR+ II ++R  + + +++E  TP+L
Sbjct: 144 PLPDKWHGLQDKEQKYRQRYLDLISNQDSFDRFHKRSHIITAIRNYLDSHDYLEVETPVL 203

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + L+  G +R ++I   FR+E   + 
Sbjct: 204 HNQAGGANARPFITHHNALNIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGMDTR 262

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  L+  +++ +  D+++  E + +   +  +              DD +  Y  
Sbjct: 263 HNP-EFTMLESYVAYYDFHDVMDETEGIFKAAAKTVT--------------DDGMITYQG 307

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
              DL  P    ++ +         F K +  +   ++                 +N + 
Sbjct: 308 HTIDLDKPFKRQHMVDAIKEYTGIDFWKPMDDDDAKKLADEHHIHYEPWWKTGHIINAFF 367

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
               QP L    +     G+   + P+AK     
Sbjct: 368 EELVQPKLEQPTFIY---GHPVEISPLAKKNAED 398



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 4/120 (3%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K++     +  P       K N        +++L     E A+     +      Q F  
Sbjct: 374 KLEQPTFIYGHPVEISPLAKKNAEDPRFTDRFELYILTNEFANAFTELNDPIDQRQRFEA 433

Query: 511 VGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
               ++   +   G       A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  +
Sbjct: 434 QVKERQEGNDEAEGIDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTMR 493


>gi|229077367|ref|ZP_04210034.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228705946|gb|EEL58265.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 499

 Score =  206 bits (525), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 60/318 (18%), Positives = 130/318 (40%), Gaps = 25/318 (7%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G+    ++      V ++G +   R  G   F  ++D +G  Q+    D+   +  +  +
Sbjct: 49  GEFSKEELEEKEIAVSIAGRIMTKRGKGKAGFAHVQDLHGQVQIYVRKDAVGDDEYELFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +    G ++    +    N+  G++ + A    +L+ +   PLP           R+
Sbjct: 109 TADL----GDLVGIEGKVFKTNV--GELSVKATGFTLLTKSLR-PLPDKYHGLKDVEQRY 161

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F    
Sbjct: 162 RQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFTTHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ 
Sbjct: 222 NALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYA 279

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRN 295
           +  DI+   E+++  + ++     T+            + R+   DAI++Y     D  N
Sbjct: 280 DYKDIMKLTEDMVAHIAKKVLGTTTIQYGDYEINLEPEWTRLHMVDAIKQY--SGADFWN 337

Query: 296 PIIMHNVTEHFVHSEFRV 313
           P+ +    E        +
Sbjct: 338 PMSIEEARELAKEHNVEI 355



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   +  E   I++  F+E   E+K I      +  P       K ND    
Sbjct: 345 RELAKEHNVEIKDTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDEDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  A ++R+V LFP   +  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMHHKQD 499


>gi|209877783|ref|XP_002140333.1| lysyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
 gi|209555939|gb|EEA05984.1| lysyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
          Length = 557

 Score =  206 bits (525), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 104/567 (18%), Positives = 191/567 (33%), Gaps = 124/567 (21%)

Query: 13  GVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVAN------PDSACFEIAKSV 65
           G  +    + L+G +  +R     +IF DI       Q++AN            ++   +
Sbjct: 81  GEVEKDKVISLAGRITSIRSASSKLIFYDIVGDDKKVQIIANLLGHDNTTGNFNQVHSEI 140

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           R   V+ + G                G++ L  + I +LS      LP        + IR
Sbjct: 141 RRGDVVGVIG---------NPGKSRRGELSLFIKSILLLSPCY-HMLPTAISGLKDQEIR 190

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVP 183
           ++ R+LDL  +   + + K R+R +  +R        +E  TP++    S   AR F+  
Sbjct: 191 YRQRYLDLILNEDSRRVFKLRSRALKFIRNFFDNLGCLEVETPMMNLIYSGASARPFITY 250

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y +  AP+ Y + L+  GFDR ++I   FR+E       P EF  +++ +++
Sbjct: 251 HNELNTQLY-MRIAPEIYLKQLVIGGFDRVYEIGKNFRNEGIDLTHNP-EFTAVEVYIAY 308

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            +  D+++  E ++ G+  E      +               Y  D PD   P+ ++   
Sbjct: 309 ADYYDLMDMTEELISGLIMEIHGKLQIE--------------YNPDGPD-SEPVTIN--- 350

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
                     F++                           + E   + G+  L  +    
Sbjct: 351 ----------FTRP--------------------WKRYSFVEEIEAAIGKSLLRPL---- 376

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           +   N+  M  + K  +I                        P            H    
Sbjct: 377 NGQENIKFMLDICKEYSIEV--------------------PQPQTAAKLLDKLAGHF--- 413

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
              I   C    +I+D                 +P TM           ++      +++
Sbjct: 414 ---IEIKCHNPSFIID-----------------HPQTMSPLAKWHRSKAEV----TERFE 449

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGI 539
           L   G E+ +     +        F     +KE+ +            A + G+PP GG 
Sbjct: 450 LFVLGKELCNAYTELNEPRQQRTCFEEQVKAKELGDTEACPIDETFCLALEHGLPPTGGW 509

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             G+DR++MLL    N++EV LFP  +
Sbjct: 510 GLGVDRLIMLLANKNNIKEVVLFPAMK 536


>gi|115315489|ref|YP_764212.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156503376|ref|YP_001429441.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|115130388|gb|ABI83575.1| lysine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156253979|gb|ABU62485.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 576

 Score =  206 bits (525), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 17/300 (5%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV            
Sbjct: 122 RYTDKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPDGQY 181

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++ ++   LC  G ++  +      N  TG++ + A   EIL+ A   PLP        +
Sbjct: 182 ETFKN---LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHGLADQ 235

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++       A    
Sbjct: 236 EMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAAAKPF 295

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  L+  M
Sbjct: 296 KTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGISSRHNP-EFTMLEFYM 354

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPD 292
           ++ + +D+++  E++L  + +E      +            + RI   D+I +Y  D   
Sbjct: 355 AYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYNDDITK 414



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 51/337 (15%), Positives = 106/337 (31%), Gaps = 44/337 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---- 298
           + ++ D +     ++         G   +  F        +  Y    P+L    +    
Sbjct: 269 YFDRLDFMEVETPMMH-----VLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVVGG 323

Query: 299 MHNVTEHFVH-SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQPGL 356
              V E   +     + S+        E +   A          D +++  +   G   L
Sbjct: 324 FERVYEINRNFRNEGISSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEIL 383

Query: 357 AYIFWRLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            Y  ++++  G    +     + K+ + +  E +      +            ++     
Sbjct: 384 EYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKK---IAEKLKIKVEAYHEL 440

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               N I +E   +     +  +I D+P               +P    Q G        
Sbjct: 441 GHLINEIFEE--TVEHQLIQPTFITDYP------------AVVSPLARRQDGNPEFTD-- 484

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  +++      E+A+G    + +E   + F     +     +          RA 
Sbjct: 485 -------RFEFFIGAREVANGFSELNDAEDQAERFRKQVEAAASGDDEAMPYDKDYIRAL 537

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP  G   GIDR+VM L  ++++R+V LFP  +
Sbjct: 538 EYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFPHMK 574


>gi|288941014|ref|YP_003443254.1| lysyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896386|gb|ADC62222.1| lysyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 505

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 62/278 (22%), Positives = 116/278 (41%), Gaps = 19/278 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+L+G +   R  G   F  I+D     QV    D    E     + E  L   G ++ 
Sbjct: 66  RVKLAGRLMTRRVMGKASFAHIQDMSARIQVFVQRDQVGEETYDHFKRELDL---GDIIG 122

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
              +       TG++ +    + +L+ A   PLP           R++ R+LDL  +T  
Sbjct: 123 VEGQVF--KTKTGELSVRCDSLRLLTKALR-PLPEKFHGLTDMESRYRQRYLDLIMNTGT 179

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQA 197
           ++  + RT I+  +R  +    ++E  TP++        AR F+          + L  A
Sbjct: 180 RDTFRVRTAIVQFIRDYLNGRGYLEVETPMMQVIPGGAVARPFITHHNALDMQLF-LRIA 238

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ + + L+  GF++ ++I   FR+E   +   P EF  L+   ++ +  D+++  E++L
Sbjct: 239 PELFLKRLVVGGFEKVYEINRNFRNEGLSTRHNP-EFTMLEFYEAYADYHDLMDLTEDML 297

Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           R +  E      +            F R+   DAI ++
Sbjct: 298 RRMAIEVLGTTQIQYQGANYDFGRPFARLSVRDAILQF 335



 Score = 90.9 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 7/130 (5%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
            +E   E + +D      T     +  L + ND       +++L   G EIA+G    + 
Sbjct: 374 LFEQTVESRLMDPTF--ITRYPTEVSPLARRNDEDPSVTDRFELFVGGREIANGFSELND 431

Query: 501 SEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           +E   + F      K    +          RA + G+PP  G   GIDR+VML   + ++
Sbjct: 432 AEDQAERFRAQVAEKEAGDQEAMYYDADYVRALEHGLPPTAGEGIGIDRLVMLFTDSPSI 491

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 492 RDVLLFPHMR 501


>gi|319442421|ref|ZP_07991577.1| lysyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 540

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 103/564 (18%), Positives = 184/564 (32%), Gaps = 119/564 (21%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G+    +VG    ++G V  VR  G + F  +++  G          +  E+ +   + W
Sbjct: 85  GEETTDEVG----VAGRVIFVRNTGKLAFARLQEGDGTQMQAM---LSLAEVGEDALASW 137

Query: 70  VLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
              +D G ++      + +    G++ + A    + S +          +E  E  R ++
Sbjct: 138 KTDVDLGDIVFVHGRVVASK--RGELSVMADSWSMASKSLRPLP--VAHKEMSEDTRIRH 193

Query: 129 RFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R+ DL      + N + R +++ ++R  +    F+E  TP+L        AR F   S  
Sbjct: 194 RYTDLIMREQARTNAMTRIKVMRALRNALERRGFLEVETPMLQTLHGGAAARPFETHSNA 253

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  AP+ Y +  +  G D+ F++   FR+E   S   P EF  L+   ++   
Sbjct: 254 LDIDLY-LRIAPELYLKRCVVGGIDKVFEVNRNFRNEGVDSSHSP-EFAMLETYQAYGTY 311

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           D     + ++++ +  E     T                           + + + T + 
Sbjct: 312 DTGAQLIHDIIQEIAVEVFGSTT---------------------------VTLVDGTGYD 344

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366
              E+RV     S+N                R F                          
Sbjct: 345 FGGEWRVMEMYPSLNE------------ALGRKF-------------------------- 366

Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426
                  P    +  V  ++    L     D    +   P K           I + L  
Sbjct: 367 -------PEQTAVAEVTIDSTVEELKALAEDIGLVV---PPKGGWGHGKLVEEIWEYLC- 415

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
                +   ++ DFP               +P T                  A ++DL  
Sbjct: 416 -EDQLYGPVFVRDFP------------VETSPLTRQHRS---------KPGVAEKWDLYV 453

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAG 542
            GFE+A+G        +  + F +        ++           A + GMPP  G   G
Sbjct: 454 RGFELATGYSELVDPVIQRERFEDQARLAADGDDEAMVLDEDFLAAMEQGMPPTSGNGMG 513

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQ 566
           IDR++M L G   +RE  LFPM +
Sbjct: 514 IDRLLMALTGLG-IRETVLFPMVK 536


>gi|16799337|ref|NP_469605.1| lysyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|38258397|sp|Q92F47|SYK_LISIN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|16412689|emb|CAC95493.1| lysyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 498

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 69/374 (18%), Positives = 143/374 (38%), Gaps = 28/374 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            + +    V ++G +   R  G + F  I+D +   Q+    D+   +     +   +  
Sbjct: 55  DLEEAAIEVSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAIFKLADLGD 114

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G+      +       TG++ + A +  +LS +   PLP           R++ R+LD
Sbjct: 115 IIGI------KGTIFRTNTGELSVKATEFTLLSKSLR-PLPDKYHGLKDVEQRYRQRYLD 167

Query: 133 LRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGS 190
           L  +       V R++I+   R  M  + F+E  TP+L T +    A+ F+         
Sbjct: 168 LITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDME 227

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D++
Sbjct: 228 LY-LRIALELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVM 285

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           + +E ++  V ++ +                    Y  D       I M +  + +V  +
Sbjct: 286 DLVEGLVSTVCKQVNG-----------TTKITYGEYDVDLTPNWRRIHMADAVKEYVGVD 334

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
              F  + S    +E+          +  +   +NE+  +  +  L    +     G+  
Sbjct: 335 ---FWNVTSDEEAHELAKKHDVAVTEHMTYGHILNEFFETYVEEKLIQPTFVY---GHPV 388

Query: 371 GMGPVAKHLNIVNT 384
            + P+AK       
Sbjct: 389 EISPLAKKNKEDER 402



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + K  +       +++L   G E A+     +  
Sbjct: 368 FFETYVEEKLIQPTFVYGHPVEISPLAKKNKEDERF-TDRFELFIVGREHANAFSELNDP 426

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +   G       A + G+PP GG+  GIDR+VMLL  A ++R
Sbjct: 427 IDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIR 486

Query: 558 EVSLFPMSQNF 568
           ++ LFP  ++ 
Sbjct: 487 DILLFPTMKHR 497


>gi|298370419|ref|ZP_06981735.1| lysine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281879|gb|EFI23368.1| lysine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 503

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 68/302 (22%), Positives = 129/302 (42%), Gaps = 22/302 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   +  +L   D+   V+++G +   R  G   F  I+D  G  Q+  N      E+
Sbjct: 51  KKYGEINKEELDPQDI--PVKIAGRMMLKRQMGKASFATIQDMSGQIQLYLNNKGVSQEV 108

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                   +  I G      AE        G++ +    I +LS +   PLP   +    
Sbjct: 109 LDDFNHWDLGDIVG------AEGTLFKTNHGELTVRVSAIRLLSKSLR-PLPDKHKGLAD 161

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           + ++++ R++DL  +   ++  +KR++II ++R  M++E ++E  TP++        A+ 
Sbjct: 162 QEVKYRQRYVDLIVNPESRDTFIKRSKIIQTVRNYMVSEGYLEVETPMMHPIPGGATAKP 221

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  G +R F+I   FR+E   +   P EF  ++ 
Sbjct: 222 FITHHNALDMPLY-LRIAPELYLKRLVVGGLERVFEINRSFRNEGMSTRHNP-EFTMMEF 279

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
             +F   + ++   E V+R   E       +S         + F R+   +AI++Y    
Sbjct: 280 YEAFCTYERMMEMTEGVIRACAETVCGAAKISCNGKEVDLASPFERLTILEAIKKYNPHY 339

Query: 291 PD 292
            D
Sbjct: 340 TD 341



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 56/146 (38%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIIDYP---------------------VEVSPLARASDTKPGLTDRFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E     F      K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQSTRFRAQVAQKDAGDDEAMHYDADYIRAMEYGLPPTGGSG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+DR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGLDRLVMLLTDSQTIRDVILFPQMR 501


>gi|294495524|ref|YP_003542017.1| aspartyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292666523|gb|ADE36372.1| aspartyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 443

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 94/346 (27%), Positives = 159/346 (45%), Gaps = 29/346 (8%)

Query: 5   RTHSCGDLGVSDVGS-FVRLSGWVHRVRPHGGIIFLDIRDHYG---ITQVVANPDSACFE 60
           RTH    +    +G   V L+GWVH VR  GGI F+ +RD  G   +T V    D   F 
Sbjct: 7   RTHYTTQIDPGKIGDDKVALAGWVHEVRDLGGICFVVLRDRQGRAQVTLVKKKIDRELFN 66

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGERE 119
            A+ +  E V+ + G +                 EL   +IE+L+ A+  LPL   G+ +
Sbjct: 67  FARKLIRESVISVRGSI-------KPEEKAPNGYELIPDEIELLNEADSPLPLDTTGKVD 119

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   RF+DLRR   +     R  +++++R  +  + F+E S+P + A++ EG   
Sbjct: 120 AELDTRLDSRFIDLRRSRTNAIFRIRHEVLHAVRNYLANDGFLETSSPKVVATATEGGTA 179

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               +  ++ +F  L Q+PQ +KQ+LM+ G DR F+I P FR E+  + R   E   +D+
Sbjct: 180 LFPITYFDREAF--LNQSPQLFKQILMSGGMDRVFEIGPIFRAEEHDTRRHLNEATSIDI 237

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNG------------NTVSNNFLRICYDDAIRRYG 287
           E SFV+  D++  +EN++  V+ +                      FL++ Y +AI    
Sbjct: 238 EASFVDHFDVMEILENMVEYVYNQVIENVPDALEVLGIELKVPKTPFLKLTYQEAIDIVN 297

Query: 288 TD-KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
           +  + +L+    +  ++EH +     VF +    +     W    K
Sbjct: 298 SHGEEELKWGDDLSTLSEHTI--GEHVFQETGEEHYFIIDWPTEIK 341



 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 71/201 (35%), Gaps = 34/201 (16%)

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-------- 432
               E + + L +           + +   +   +       +L  ++ +          
Sbjct: 267 PDALEVLGIELKVPKTPFLKLTYQEAIDIVNSHGEEELKWGDDLSTLSEHTIGEHVFQET 326

Query: 433 --EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
             E  +I+D+P                PF                   +  +D++    E
Sbjct: 327 GEEHYFIIDWP------------TEIKPFYAMPYE--------EKPEFSKSFDMMHRTME 366

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           ++SG  R H+ E++    ++ G+        F    RAF  GMPPH G   G +R VM +
Sbjct: 367 LSSGAQRIHVPEMLKNRIADQGLDP----EGFDFYLRAFSYGMPPHSGWGLGCERFVMTM 422

Query: 551 LGAKNVREVSLFPMSQNFCDL 571
           LG +N+R+V LFP  +     
Sbjct: 423 LGVENIRDVVLFPRDRRRLSP 443


>gi|221198423|ref|ZP_03571469.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221208900|ref|ZP_03581897.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221214769|ref|ZP_03587738.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221165308|gb|EED97785.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221171183|gb|EEE03633.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221182355|gb|EEE14756.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 508

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 66/308 (21%), Positives = 118/308 (38%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   +L      S           V ++G +   R  G   F  ++D  G  Q    P+
Sbjct: 43  THRAAELQAKFAESDKEALEANPFEVAVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPN 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +LS A   PLP  
Sbjct: 103 DVGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVKCTELRLLSKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + +R++ R++DL            RT+ I S+R  M    F+E  TP+L     
Sbjct: 156 FHGLSDQEMRYRQRYVDLIVTPETRDTFRARTKTIASIRKFMSDAEFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T+            F R+    AI+
Sbjct: 274 FTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFHRLTITQAIQ 333

Query: 285 RYGTDKPD 292
           +Y     D
Sbjct: 334 KYAPQYTD 341



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 60/163 (36%), Gaps = 27/163 (16%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
            P    +     +  + +E        +E  +I+D+P                       
Sbjct: 363 QPAFLNAGIGALQLALFEE--TAESQLWEPTFIIDYP---------------------VE 399

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF-- 522
                + +D +     +++L   G EIA+G    +  E     F      K+  +     
Sbjct: 400 VSPLARASDTVPGITERFELFITGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMY 459

Query: 523 --GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 RA + GMPP GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 460 FDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|193084078|gb|ACF09748.1| aspartyl-tRNA synthetase [uncultured marine group III euryarchaeote
           AD1000-40-D7]
          Length = 427

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 87/360 (24%), Positives = 150/360 (41%), Gaps = 28/360 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            + T  CG++  SD G+   L GW+   R  GGI F+ +RD  G+ Q+         E  
Sbjct: 1   MFYTRKCGEIEESDFGTEQTLCGWLQDTRNLGGIAFIQLRDITGVIQLTLLKKKLDEEKF 60

Query: 63  K---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGER 118
           K   ++  E ++ + G+V              G +E+    IE+++ AE      V  + 
Sbjct: 61  KNWTTINRESIILVRGIVKENKE-------APGGVEMLPDNIELVNEAETPLPLGVIDKI 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +     R   R+LDLR+  +  N   R  I  ++   +  E F+E  TP + AS+ EG  
Sbjct: 114 DSEIETRLNARYLDLRKSEIAANFQIRAAISGAVHKHLRREKFLEVQTPKIIASATEGGT 173

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                   ++ ++ A  Q+PQ YKQ+LM  G +R +++ P FR E+  + R   EF  +D
Sbjct: 174 SLFEMKYFDRTAYLA--QSPQLYKQMLMGGGLERVYEVGPAFRAEEHNTPRHLNEFISID 231

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTV-----------SNNFLRICYDDAIRRYG 287
           +EMSF + D ++  ME ++       +                     RI YD+A+    
Sbjct: 232 IEMSFADDDVVMGVMERLIDTAARAVAKETEALETLGIEPIELELPLPRITYDEAVEMAQ 291

Query: 288 TDKPDLRN-PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                  +  +         ++  + +    LS+ P Y     P +    ++ F    NE
Sbjct: 292 GKAEWGEDLSMEATRAIAKQMNGFYFITKWPLSLKPFYIQ---PDEDPKYSKGFDFMYNE 348



 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 43/193 (22%), Positives = 69/193 (35%), Gaps = 32/193 (16%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
           L I   E       +   ++     G        + +A   IA+++         F +I 
Sbjct: 267 LGIEPIELELPLPRITYDEAVEMAQGKAEWGEDLSMEATRAIAKQMN-------GFYFIT 319

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            +P             +  PF +                 +  +D + N  E+ SGG R 
Sbjct: 320 KWPL------------SLKPFYIQPDEDPKY---------SKGFDFMYNEVEMTSGGQRV 358

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
           H   ++ +     G+      + F      F+ GMPPH G   G+DR+ M+  GAKNVRE
Sbjct: 359 HDVNLLRKRLKEQGLDP----DGFNHYLDPFRYGMPPHAGWGLGLDRLAMIFAGAKNVRE 414

Query: 559 VSLFPMSQNFCDL 571
             LFP  +     
Sbjct: 415 CVLFPRDRTRMTP 427


>gi|254368388|ref|ZP_04984405.1| lysine-tRNA ligase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157121282|gb|EDO65483.1| lysine-tRNA ligase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 576

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 17/300 (5%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV            
Sbjct: 122 RYTDKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPDGQY 181

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++ ++   LC  G ++  +      N  TG++ + A   EIL+ A   PLP        +
Sbjct: 182 ETFKN---LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHGLADQ 235

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++       A    
Sbjct: 236 EMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAAAKPF 295

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  L+  M
Sbjct: 296 KTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGISSRHNP-EFTMLEFYM 354

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPD 292
           ++ + +D+++  E++L  + +E      +            + RI   D+I +Y  D   
Sbjct: 355 AYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYNDDITK 414



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 51/337 (15%), Positives = 106/337 (31%), Gaps = 44/337 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---- 298
           + ++ D +     ++         G   +  F        +  Y    P+L    +    
Sbjct: 269 YFDRLDFMEVETPMMH-----VLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVVGG 323

Query: 299 MHNVTEHFVH-SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQPGL 356
              V E   +     + S+        E +   A          D +++  +   G   L
Sbjct: 324 FERVYEINRNFRNEGISSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEIL 383

Query: 357 AYIFWRLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            Y  ++++  G    +     + K+ + +  E +      +            ++     
Sbjct: 384 EYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKK---IAEKLKIKVEAYHEL 440

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               N I +E   +     +  +I D+P               +P    Q G        
Sbjct: 441 GHLINEIFEE--TVEHQLIQPTFITDYP------------AVVSPLARRQDGNPEFTD-- 484

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  +++      E+A+G    + +E   + F     +     +          RA 
Sbjct: 485 -------RFEFFIGAREVANGFSELNDAEDQAERFRKQVEAAASGDDEAMPYDKDYIRAL 537

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP  G   GIDR+VM L  ++++R+V LFP  +
Sbjct: 538 EYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFPHMK 574


>gi|47097268|ref|ZP_00234828.1| lysyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254829645|ref|ZP_05234332.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254901220|ref|ZP_05261144.1| lysyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254914105|ref|ZP_05264117.1| lysyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254938415|ref|ZP_05270112.1| lysyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|47014368|gb|EAL05341.1| lysyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258602063|gb|EEW15388.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258611029|gb|EEW23637.1| lysyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293592703|gb|EFG00464.1| lysyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 498

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 143/373 (38%), Gaps = 28/373 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +    V ++G +   R  G + F  I+D +   Q+    D+   +     +   +  I
Sbjct: 56  LEEAAIEVSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKLADLGDI 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      +       TG++ + A +  +LS +   PLP           R++ R+LDL
Sbjct: 116 IGI------KGTIFRTNTGELSVKATEFTLLSKSLR-PLPDKYHGLKDVEQRYRQRYLDL 168

Query: 134 RRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +       V R++I+   R  M  + F+E  TP+L T +    A+ F+          
Sbjct: 169 ITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMEL 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++
Sbjct: 229 Y-LRIALELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMD 286

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +E ++  V ++ +              +     Y  D       I M +  + +V  +F
Sbjct: 287 LVEGLVSTVCKQVNG-----------TTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDF 335

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
              +         +   +P      +  +   +NE+  +  +  L    +     G+   
Sbjct: 336 WNVTSDEEALELAKKHDVPV---TEHMTYGHILNEFFETYVEEKLIQPTFVY---GHPVE 389

Query: 372 MGPVAKHLNIVNT 384
           + P+AK       
Sbjct: 390 ISPLAKKNKEDER 402



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + K  +       +++L   G E A+     +  
Sbjct: 368 FFETYVEEKLIQPTFVYGHPVEISPLAKKNKEDERF-TDRFELFIVGREHANAFSELNDP 426

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +   G       A + G+PP GG+  GIDR+VMLL  A ++R
Sbjct: 427 IDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIR 486

Query: 558 EVSLFPMSQNF 568
           ++ LFP  ++ 
Sbjct: 487 DILLFPTMKHR 497


>gi|258406354|ref|YP_003199096.1| lysyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257798581|gb|ACV69518.1| lysyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 504

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 73/348 (20%), Positives = 128/348 (36%), Gaps = 20/348 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +  Y + S  DL   +V     L+G +  +R  G   F+ I+D  G  QV    D+   +
Sbjct: 48  IQSYESLSAEDL--ENVEHTFALAGRIMAIRSFGKATFMHIQDSTGKLQVFVQRDAVGAD 105

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + K  +   V  I G+              T ++ L A+ +E+++ +   PLP       
Sbjct: 106 LYKLFKKFDVGDIVGV------RGTLFRTRTDELTLKAEHVELVTKS-MRPLPEKYHGLK 158

Query: 121 PESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGAR 178
               R++ R++DL          VKRTRI+  +R  +    F+E  TP++        AR
Sbjct: 159 DVETRYRQRYVDLIVTPQARDIFVKRTRIVQGLRHFLDNRGFMEVETPMMQHIPGGATAR 218

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+          Y L  AP+ Y + L+  G +R ++I   FR+E   +   P EF  L+
Sbjct: 219 PFVTHHNALDMELY-LRIAPELYLKRLLVGGLERVYEINRNFRNEGISTQHNP-EFTMLE 276

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              ++ +  D+++  E +   + ++            RI Y       G     L     
Sbjct: 277 FYWAYADVYDLMDLTEEMFAQLAQDVCGTT-------RITYQGQEIELGGRWNRLTFHQA 329

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           +  +                 V    E      + G       D + E
Sbjct: 330 LEEIGGLEPQQYQDHDQAQALVQRLGENVQTGEQLGKTQAKLFDLLVE 377



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 55/147 (37%), Gaps = 16/147 (10%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++LG      F+               E K+   H     P       + N+       
Sbjct: 361 GEQLGKTQAKLFDLL------------VEPKLIQPHFISHYPTDISPLSRRNEENPELTD 408

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G E+A+     +      Q F      K   ++          RA + GMPP 
Sbjct: 409 RFELFICGREMANAFSELNDPFDQRQRFEQQVQEKSAGDDEAHAMDEDYLRALEYGMPPA 468

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++REV LFP
Sbjct: 469 AGQGVGIDRLVMLLTDSASIREVILFP 495


>gi|167626876|ref|YP_001677376.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
 gi|167596877|gb|ABZ86875.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
          Length = 560

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 67/301 (22%), Positives = 130/301 (43%), Gaps = 17/301 (5%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           ++Y  +S  +L   +      ++G V   R  G   F+ ++D+ G  QV           
Sbjct: 105 NQYAQYSKQELEELEDKKQYNITGRVVLRRVMGKASFITLQDYSGRIQVYLKKSDLPEGQ 164

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            ++ ++   LC  G ++  +      N  TG++ + A   EIL+ A   PLP        
Sbjct: 165 YETFKN---LCDLGDIVGITGTMFKTN--TGELSVEASHFEILTKAIR-PLPDKFHGLAD 218

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           + +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++       A   
Sbjct: 219 QEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDKLDFMEVETPMMHVLQGGAAAKP 278

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                        L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  L+  
Sbjct: 279 FKTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTMLEFY 337

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKP 291
           M++ + +D+++  EN+L  + +E      +            + RI   D+I +Y  D  
Sbjct: 338 MAYADYNDLMDLTENMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYNDDIT 397

Query: 292 D 292
            
Sbjct: 398 K 398



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/338 (15%), Positives = 104/338 (30%), Gaps = 44/338 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           + ++ D +     ++         G   +  F        +  Y    P+L    ++   
Sbjct: 253 YFDKLDFMEVETPMMH-----VLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVVGG 307

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE------WARSQGQPGL 356
            E          ++ +S     E   +       +      + E           G   L
Sbjct: 308 FERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTENMLSKLVQEVIGSEIL 367

Query: 357 AYIFWRLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            Y  ++++  G    +     + K+ + +  E +      +       I    ++     
Sbjct: 368 EYGEYKINFGGKYERISMVDSIVKYNDDITKEDLATFESAKALAEKLKI---KVEAYHEL 424

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               N I +E   +     +  +I D+P               +P    Q G        
Sbjct: 425 GHLINEIFEE--TVEHQLIQPTFITDYP------------AVVSPLARRQDGNPEFTD-- 468

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  +++      EIA+G    + +E   + F     +     +          RA 
Sbjct: 469 -------RFEFFVGAREIANGFSELNDAEDQAERFRKQVEAAASGDDEAMPYDKDYIRAL 521

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + GMPP  G   GIDR+VM L  ++++R+V LFP  + 
Sbjct: 522 EYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFPHMKR 559


>gi|227522413|ref|ZP_03952462.1| lysyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227090471|gb|EEI25783.1| lysyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 501

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 75/394 (19%), Positives = 151/394 (38%), Gaps = 39/394 (9%)

Query: 2   HRY-RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RT+    L             ++   V ++G +   R  G + F D++D  G  Q+
Sbjct: 31  HRFQRTYLATQLHDEFDKTDKDDLMNLNKKVTVAGRMMAKRGKGKVGFADLKDRTGKIQI 90

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    +I    +   +    G  +  S + I  ++  G++ + A+ +  LS A   
Sbjct: 91  YVRKDIVGDDIYHIFKRSDI----GDHLGISGQIIKTDM--GELTVRAESVTFLSKALR- 143

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP        +  +++ R+LDL  +        KR+ II ++R  + + +++E  TP+L
Sbjct: 144 PLPDKWHGLQDKEQKYRQRYLDLISNQDSFDRFHKRSHIITAIRNYLDSHDYLEVETPVL 203

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + L+  G +R ++I   FR+E   + 
Sbjct: 204 HNQAGGANARPFITHHNALNIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGMDTR 262

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  L+  +++ +  D+++  E + +   +  +              DD +  Y  
Sbjct: 263 HNP-EFTMLESYVAYYDFHDVMDETEGIFKAAAKTVT--------------DDGMITYQG 307

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
            + DL  P    ++ +         F K +  +   ++                 +N + 
Sbjct: 308 HRIDLDKPFKRQHMVDAIKEYTGIDFWKPMDDDDAKKLADEHHIHYEPWWKTGHIINAFF 367

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
               QP L    +     G+   + P+AK     
Sbjct: 368 EELVQPKLEQPTFIY---GHPVEISPLAKKNAED 398



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 6/105 (5%)

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG- 524
           +      D      F++ ++ N  E A+     +      Q F      ++   +   G 
Sbjct: 391 LAKKNAEDPRFTDRFEFYILTN--EFANAFTELNDPIDQRQRFEAQVKERQEGNDEAEGI 448

Query: 525 ---LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                 A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  +
Sbjct: 449 DEDYIEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTMR 493


>gi|291279545|ref|YP_003496380.1| lysyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754247|dbj|BAI80624.1| lysyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 488

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 134/353 (37%), Gaps = 32/353 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           T+   D+  + + +           V ++G V  +R  G   FL+I+D  G  QV     
Sbjct: 27  TNKISDIKKAYINTSSAELLDKKYRVTVAGRVMAIREFGKAAFLNIKDRSGSIQVYIAKK 86

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               +  +  +   +    G+              TG++ + A+  +IL+ A    LP  
Sbjct: 87  ELSEQEYEIFKKTDIGDFIGV------SGYLFKTKTGELTVLAETYKILTKALR-DLPEK 139

Query: 116 GEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                    R++ R++DL  +  + +  + R++II  MR   I   FIE  TP++   + 
Sbjct: 140 WHGLKDVEKRYRQRYVDLIVNDEIRELFILRSKIIQRMRQFFIENEFIEVETPMMQPIAG 199

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+        + Y L  AP+ Y + L+  G +R F+I   FR+E   +   P E
Sbjct: 200 GATARPFITHHNALDMTLY-LRIAPELYLKRLVIGGLERVFEINRNFRNEGISTKHNP-E 257

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  ++  M++ +  D +   EN+L  + ++     T++              Y  D    
Sbjct: 258 FTMVEWYMAYADYYDQMAFTENMLYTIAKDVLGKTTIT-----------FGEYEIDLTPP 306

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
            + + + +  E +   +        S     +   I  +   G       + E
Sbjct: 307 WDKLTLEDSIEKYTDIKKDDLKDFDSAKQVAKNLEIKLEKNWGRGKIVLEIFE 359



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 5/128 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E K I          +    +    D   +   +++L   G E+A+G    +   
Sbjct: 358 FEKTVEHKLIQPTFIIDYPKEVSPLAKSKFDNPDV-TERFELFIAGMEVANGFNELNDPI 416

Query: 503 VMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F     +KE  +           RA + G+PP  G   G+DR+VML     ++RE
Sbjct: 417 DQKERFEKQVEAKEAGDEEAHMMDHDYIRALEYGLPPTAGQGLGVDRLVMLFTNKNSIRE 476

Query: 559 VSLFPMSQ 566
           V LFP  +
Sbjct: 477 VILFPHMR 484


>gi|73748416|ref|YP_307655.1| lysyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|123759759|sp|Q3ZWX9|SYK_DEHSC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|73660132|emb|CAI82739.1| lysyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 498

 Score =  206 bits (525), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 76/298 (25%), Positives = 138/298 (46%), Gaps = 27/298 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRS 67
           +   + +   ++L+G +   R  G I F+DIRD  G  Q+     + D A  E+ K +  
Sbjct: 46  ETQENHLKEVLKLAGRIMNRRDMGKISFMDIRDGSGKMQIFFRQNDLDEASIELLKDLDL 105

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
              + ++G +M            TG+  L+A K+ +LS +  LPLP           R++
Sbjct: 106 GDFIGVEGSLMRT---------RTGEPSLAATKVSMLSKSL-LPLPEKWHGLQDVEKRYR 155

Query: 128 YRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSR 185
            R+LDL  +   +     R+R+I+ +R  M A+ F+E  TP+L   +    AR F+   +
Sbjct: 156 QRYLDLISNADARQTFLTRSRVISVIRAFMNAKGFLEVETPVLQPEAGGALARPFITHHQ 215

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                FY +  A + + + L+  GFDR ++I   FR+E   +   P EF  ++   ++  
Sbjct: 216 ALNCDFY-MRIALELHLKRLIVGGFDRVYEIGRIFRNEGISTRHNP-EFTMMESYQAYAN 273

Query: 246 QDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY-GTDKPDL 293
             D+++ +E ++  V +E S G            +  + R+   DA+++Y G D  D 
Sbjct: 274 YKDVMDFLEEMVSSVVKEISGGYTLPFGDITLDFTPPWPRLTMRDAVKQYAGIDFFDF 331



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 9/123 (7%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM-----LQAFSNV 511
           +P  M    +   K  D       +++ +C   EIA+     +           Q     
Sbjct: 379 HPVAMSP--LAKQKPEDPR--LTERFEAICANMEIANAFSELNDPVEQRARFKEQLEKRS 434

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            +  +  E+       A   GMPP GG+  GIDR+VML     ++REV LFP  ++  D 
Sbjct: 435 QLRTDESESVDEDFLAALAYGMPPTGGLGVGIDRLVMLFTNHDSIREVILFPALKDREDT 494

Query: 572 LMG 574
              
Sbjct: 495 KTQ 497


>gi|154148211|ref|YP_001407169.1| lysyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|166229802|sp|A7I3S8|SYK_CAMHC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|153804220|gb|ABS51227.1| lysyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 499

 Score =  206 bits (525), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 95/570 (16%), Positives = 179/570 (31%), Gaps = 124/570 (21%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
              +         + +SG +   R  G   F +I D  G  Q+  + DS   E     + 
Sbjct: 44  YIAENETKKADEEIVISGRIKLKRVAGRSTFANIEDESGNVQIYYSKDSIGEENYLKFKK 103

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
              +    LV     +       TG+  +    + + S A  + LP        + +R++
Sbjct: 104 NIEVGDIILV-----KGYAFLTGTGEFSIHVSDLILASKAISI-LPEKFHGLADKELRYR 157

Query: 128 YRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSR 185
            R+LD+  D   +    KR+ I+ ++R       F+E  TP++   +    A+ F+    
Sbjct: 158 QRYLDMIMDPSVRVDFEKRSLIVRTIRRFFEDRGFLEVETPMMHQIAGGANAKPFITHHN 217

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ Y + L+  G +  F++  CFR+E                      
Sbjct: 218 ALDIDRY-LKIAPELYLKRLVVGGMNSVFEMNRCFRNEG--------------------- 255

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
               ++   N                  F  I +  A   Y              ++TE 
Sbjct: 256 ----MDLTHN----------------PEFTSIEFYWAWHNY----------FEAMDLTEE 285

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
                  +F+++L      E+          ++ F               + Y+    D 
Sbjct: 286 -------LFNELLKTLNLGEILDYGNLKIDFSKKF-------------QRIKYL----DA 321

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
              +  + P          + ++            F A + L         +  +     
Sbjct: 322 LVLIGEISPEIIKDKDEILKKLKSD---------GFEANEKL----DLGHLQAELFD--N 366

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
            +        +I DFP             + +P +        +         A +++L 
Sbjct: 367 YVESKLINPTFITDFP------------VSISPLSRRSDKDPEI---------AERFELY 405

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMPPHGGIAA 541
             G E+A+     +      + F     +K    +          RA    MPP  G   
Sbjct: 406 IAGKELANAFNELNDPLDQYERFKAQIEAKKAGDDEAHEMDEDYVRALSYAMPPTVGWGL 465

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G+DR+VM+LL   ++R+V LFP  +   +L
Sbjct: 466 GVDRLVMILLNKASIRDVILFPAMKPIKNL 495


>gi|330817653|ref|YP_004361358.1| Lysyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327370046|gb|AEA61402.1| Lysyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 509

 Score =  206 bits (525), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 69/308 (22%), Positives = 123/308 (39%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGV--SDVGS--------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL    ++            V+L+G +   R  G   F  ++D  G  Q    P 
Sbjct: 44  THHAADLQADYAEADKDALEAKPLEVKLAGRMMLRRVMGKASFATVQDGSGQIQFFVTPA 103

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +    G +++ S      N   G++ +   ++ +L+ A   PLP  
Sbjct: 104 DVGAETYDAFKKWDL----GDIVAASGVLFRTN--KGELSVKCTELRLLAKALR-PLPDK 156

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + +R++ R++DL            RT+ I S+R  M   +F+E  TP+L     
Sbjct: 157 FHGLADQEMRYRQRYVDLIVTPETRNTFRARTKAIASIRKFMADADFMEVETPMLHPIPG 216

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 217 GATAKPFVTHHNALDMEMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPE 274

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E V+R    +     T+            F R+    AI+
Sbjct: 275 FTMMEFYAAYTDYRWMMDFTEQVIRQAAVDSLGTATIQYQGRELDLAKPFHRLTIKQAIQ 334

Query: 285 RYGTDKPD 292
           +Y  D  D
Sbjct: 335 KYAPDYSD 342



 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 61/164 (37%), Gaps = 27/164 (16%)

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463
           G P    +     +  + +E        +E  +I+D+P                      
Sbjct: 363 GQPAFLNAGLGALQLALFEE--TAEAQLWEPTFIIDYP---------------------V 399

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF- 522
                 + +D +     +++L   G EIA+G    +  E     F      K+  +    
Sbjct: 400 EVSPLARESDAMPGVTERFELFMTGREIANGFSELNDPEDQAARFKKQVDQKDAGDEEAM 459

Query: 523 ---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                  RA + GMPP GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 460 YFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVLLFP 503


>gi|228937379|ref|ZP_04100026.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228970265|ref|ZP_04130925.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228976835|ref|ZP_04137248.1| Lysyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228782931|gb|EEM31096.1| Lysyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228789500|gb|EEM37419.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228822337|gb|EEM68318.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|326937869|gb|AEA13765.1| lysyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 499

 Score =  206 bits (525), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 59/312 (18%), Positives = 123/312 (39%), Gaps = 20/312 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   ++   V ++G +   R  G   F  I+D +G  Q+    D+   E  +   +  +
Sbjct: 55  ELEEKEI--TVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDTVGDEEYELFTTADL 112

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               G ++    +    N+  G++ + A    +L+ +   PLP           R++ R+
Sbjct: 113 ----GDLVGIEGKVFKTNV--GELSVKATGFTLLTKSLR-PLPDKYHGLKDVEQRYRQRY 165

Query: 131 LDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQ 188
           LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F        
Sbjct: 166 LDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFTTHHNALD 225

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + +D
Sbjct: 226 MELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYND 283

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPIIMHN 301
           I+   EN++  + ++     T+      I  +    R             D   P+ +  
Sbjct: 284 IMKLTENMVAHIAKKVLGTTTIQYGDYEINLEPEWTRLHMVDAIKQHSGADFWTPMSVEE 343

Query: 302 VTEHFVHSEFRV 313
             E        +
Sbjct: 344 ARELAKEHNVEI 355



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   +  E   I++  F+E   E+K I      +  P       K ND    
Sbjct: 345 RELAKEHNVEIKDTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDEDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|313115333|ref|ZP_07800808.1| lysyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622364|gb|EFQ05844.1| lysyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 503

 Score =  206 bits (525), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 63/293 (21%), Positives = 122/293 (41%), Gaps = 20/293 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             +D G  V L+G +   R  G   F  +RD  G  Q+    D    E   + +   V  
Sbjct: 59  NETDSGKTVALAGRMMSKRVMGKASFAHLRDDKGDIQLYVRRDELGEEPYAAFKKLDVGD 118

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G+      +       TG++ + A ++ +L+ +   PLP          +R++ R++D
Sbjct: 119 IIGV------KGEVFRTKTGELSVRATELTLLAKSLR-PLPEKFHGLTDTEMRYRQRYVD 171

Query: 133 LR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L     +    VKR++I+  +R  +  + F+E  TPILT       AR F          
Sbjct: 172 LIANPEVKDTFVKRSQILKEIRAYLDEKGFLEVDTPILTPFEIGASARPFYTHHNSLNMD 231

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L    + Y + L+  G DR +++   FR+E       P EF  +++  +F +   ++
Sbjct: 232 M-VLRIETELYLKRLIVGGMDRVYEVGRIFRNEGMDPKHNP-EFTSIELYQAFTDFHGMM 289

Query: 251 NTMENVLRGVFEEF--------SNGNTVSNNFLRICYDDAIRRY-GTDKPDLR 294
           + +E + + + ++                 ++ R+   +A+++Y G D  D +
Sbjct: 290 DLVEELYKRLAQKICGSMVIPYQGKQIDMGHWERLTMVEAVKKYSGVDFNDWK 342



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 5/123 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML--- 505
           E K+      +  P       K          +++   +  E  +     +         
Sbjct: 377 EDKLIQPTFIYDYPVEISPLAKRKPDDPAFTERFEYFIDCTEYGNAFSELNDPIDQKGRF 436

Query: 506 --QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             Q      I  +           A + G+PP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 437 ERQVAERKAIEPDCKAQVDYDYVNALEYGLPPTGGLGFGVDRLVMLLTDSASIRDVLLFP 496

Query: 564 MSQ 566
             +
Sbjct: 497 TMK 499


>gi|269925130|ref|YP_003321753.1| lysyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269788790|gb|ACZ40931.1| lysyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 497

 Score =  206 bits (525), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 64/345 (18%), Positives = 132/345 (38%), Gaps = 22/345 (6%)

Query: 4   YRTHSCGDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           YRTH+  ++  S     G  V ++G +   R  G  +F D+ D  G  Q++   ++A  +
Sbjct: 38  YRTHTAHEVYSSVDSLEGQEVTVAGRLTARRDMGKSVFADLEDASGKIQLLVRLNTAGPD 97

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                +    L   G ++  +   +     TG+  +  + + IL+     PLP       
Sbjct: 98  TLSFFKE---LIDLGDIVEATGSPMRTR--TGEPTVDVKSVRILAKVL-NPLPDKWHGLE 151

Query: 121 PESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
               R++ R+LDL  +   ++  +KR +II+S+R  +    FIE  TP+L       +  
Sbjct: 152 DVEKRYRQRYLDLMVNPEVRDVFIKRAKIISSVRRYLDDLGFIEVETPVLQPLYGGASAK 211

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                       + L  A + Y + L+  G ++ ++I   FR+E   +   P EF  +++
Sbjct: 212 PFTTYYNALDQTFYLRIATELYLKRLLVGGIEKVYEIGKDFRNEGLSTKHNP-EFTMMEL 270

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + + I++ +E ++            ++     I      RR           + +
Sbjct: 271 YQAYADYNSIMDLVEKLITFTASNVLQTLKITYRGHEIDLTPPWRR-----------LPL 319

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            +V  +    +F        +        I  + G       D +
Sbjct: 320 RDVVLNATGIDFYALRDDADLAEAIRKAGIELRPGATRAQMIDEL 364



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 25/154 (16%)

Query: 414 ADARNHIAQEL-GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
              R  +  EL         +  +++D+P               +PF   +     L   
Sbjct: 354 GATRAQMIDELLDNSEHELIQPTFVIDYP------------VELSPFAKRKEDNPEL--- 398

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV---GISKEVVENRFGGLYRAF 529
                   ++++   G EI +     +      + F                     +A 
Sbjct: 399 ------TERFEVFIGGMEIGNAFTELNDPIDQARRFQAQLTNRTPDGEENPYDEDFIQAL 452

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             GMPP GG+  GIDR+VMLL    ++R+V LFP
Sbjct: 453 MYGMPPTGGLGIGIDRLVMLLTDRPSIRDVILFP 486


>gi|291457273|ref|ZP_06596663.1| lysine--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291381108|gb|EFE88626.1| lysine--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 560

 Score =  206 bits (525), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 107/574 (18%), Positives = 193/574 (33%), Gaps = 128/574 (22%)

Query: 6   THSCGDLGVSDVGSF---------VRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD 55
           T++  ++     G           V ++G V  +R  GG+ F+ +    G   Q + +  
Sbjct: 92  TNTIEEVRAKYDGKLEAGQETEDMVGIAGRVLFLRNAGGLCFVQLSAGDGTRIQGMISKK 151

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               +  K  +    L   G  +      I +   TG++ + A +  I S A +    + 
Sbjct: 152 EIGADSLKQFKQ---LVDLGDHLYLKGRVIASK--TGELSVFATEWAIASKALQPLPAL- 205

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
             ++  E  R +  ++ +  D   +N+V+ R++ + S+R    A +F+E  TP+L     
Sbjct: 206 -HKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAVASLRRTFDAHDFLEVETPMLQTLHG 264

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F           Y L  AP+ + +  +  G DR F+I   FR+E   +   P E
Sbjct: 265 GAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAP-E 322

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  ++   ++   D I   ++ +++                       A+  YG+ K   
Sbjct: 323 FTMVEAYQAYGTYDSIGQLVKELVQ---------------------QTAMDVYGSHK--- 358

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
              + + + TE+    E++  S   S++       +P  G        + + E A   G 
Sbjct: 359 ---VTLLDGTEYDFGGEWKTISMYDSLSEALGEEIVPNGGPEHPGTSVEHLGEIADKLG- 414

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                      E  +V   G + +HL                                  
Sbjct: 415 ----------VERDDVENHGKLVEHLWEH------------------------------- 433

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                             +E  ++ DFP      E   +   H                 
Sbjct: 434 ------------FYEDKLYEPTFVRDFPV-----ETSPLVKGHR---------------- 460

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
                  ++DL   GFE+A+G    +   V  + F          +            A 
Sbjct: 461 TKPGVVEKWDLYVRGFELATGYSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEAL 520

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             GMPP GG+  GIDR+++ L GA  +RE   FP
Sbjct: 521 GVGMPPAGGMGMGIDRLLIALTGA-TIRETITFP 553


>gi|134302700|ref|YP_001122668.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134050477|gb|ABO47548.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 560

 Score =  206 bits (525), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 69/300 (23%), Positives = 128/300 (42%), Gaps = 17/300 (5%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV            
Sbjct: 106 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPDGQY 165

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++ ++   LC  G ++  +      N  TG++ + A   EIL+ A   PLP        +
Sbjct: 166 ETFKN---LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHGLADQ 219

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +   + + K R++++N +R      +F+E  TP++       A    
Sbjct: 220 EMRYRQRYVDLITNEKAREVFKVRSKVVNFIRNYFDRLDFMEVETPMMHVLQGGAAAKPF 279

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  L+  M
Sbjct: 280 KTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTMLEFYM 338

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPD 292
           ++ + +D+++  E++L  + +E      +            + RI   D+I +Y  D   
Sbjct: 339 AYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYNDDITK 398



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 106/337 (31%), Gaps = 44/337 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---- 298
           + ++ D +     ++         G   +  F        +  Y    P+L    +    
Sbjct: 253 YFDRLDFMEVETPMMH-----VLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVVGG 307

Query: 299 MHNVTEHFVH-SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQPGL 356
              V E   +     V S+        E +   A          D +++  +   G   L
Sbjct: 308 FERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEIL 367

Query: 357 AYIFWRLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            Y  ++++  G    +     + K+ + +  E +      +            ++     
Sbjct: 368 EYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKK---IAEKLKIKVEAYHEL 424

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               N I +E   +     +  +I D+P               +P    Q G        
Sbjct: 425 GHLINEIFEE--TVEHQLIQPTFITDYP------------AVVSPLARRQDGNPEFTD-- 468

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  +++      E+A+G    + +E   + F     +     +          RA 
Sbjct: 469 -------RFEFFIGAREVANGFSELNDAEDQAERFRKQVEAAASGDDEAMPYDKDYIRAL 521

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP  G   GIDR+VM L  ++++R+V LFP  +
Sbjct: 522 EYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFPHMK 558


>gi|241667456|ref|ZP_04755034.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254876004|ref|ZP_05248714.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254842025|gb|EET20439.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 560

 Score =  206 bits (524), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 66/301 (21%), Positives = 130/301 (43%), Gaps = 17/301 (5%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           ++Y  +S  +L   +      ++G V   R  G   F+ ++D+ G  QV           
Sbjct: 105 NQYAQYSKQELEELEDKKQYNITGRVVLRRVMGKASFITLQDYSGRIQVYLKKSDLPEGQ 164

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            ++ ++   LC  G ++  +      N  TG++ + A   EIL+ A   PLP        
Sbjct: 165 YETFKN---LCDLGDIVGITGTMFKTN--TGELSVEASHFEILTKAIR-PLPDKFHGLAD 218

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           + +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++       A   
Sbjct: 219 QEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDKLDFMEVETPMMHVLQGGAAAKP 278

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                        L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  L+  
Sbjct: 279 FKTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTMLEFY 337

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKP 291
           M++ + +D+++  E++L  + +E      +            + RI   D+I +Y  D  
Sbjct: 338 MAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYNDDIT 397

Query: 292 D 292
            
Sbjct: 398 K 398



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 54/337 (16%), Positives = 107/337 (31%), Gaps = 44/337 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---- 298
           + ++ D +     ++         G   +  F        +  Y    P+L    +    
Sbjct: 253 YFDKLDFMEVETPMMH-----VLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVVGG 307

Query: 299 MHNVTEHFVH-SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQPGL 356
              V E   +     V S+        E +   A          D +++  +   G   L
Sbjct: 308 FERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEIL 367

Query: 357 AYIFWRLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            Y  ++++  G    +     + K+ + +  E +      +       I    ++     
Sbjct: 368 EYGEYKINFGGKYERISMVDSIVKYNDDITKEDLATFESAKALAEKLKI---KVEAYHEL 424

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               N I +E   +     +  +I D+P               +P    Q G        
Sbjct: 425 GHLINEIFEE--TVEHQLIQPTFITDYP------------AVVSPLARRQDGNPEFTD-- 468

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  +++      EIA+G    + +E   + F     +     +          RA 
Sbjct: 469 -------RFEFFVGAREIANGFSELNDAEDQAERFRKQVEAAASGDDEAMPYDKDYIRAL 521

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP  G   GIDR+VM L  ++++R+V LFP  +
Sbjct: 522 EYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFPHMK 558


>gi|328676242|gb|AEB27112.1| Lysyl-tRNA synthetase (class II) [Francisella cf. novicida Fx1]
          Length = 560

 Score =  206 bits (524), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 17/300 (5%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV            
Sbjct: 106 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPDGQY 165

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++ ++   LC  G ++  +      N  TG++ + A   EIL+ A   PLP        +
Sbjct: 166 ETFKN---LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHGLADQ 219

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++       A    
Sbjct: 220 EMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAAAKPF 279

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  L+  M
Sbjct: 280 KTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTMLEFYM 338

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPD 292
           ++ + +D+++  E++L  + +E      +            + RI   D+I +Y  D   
Sbjct: 339 AYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYNDDITK 398



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 106/337 (31%), Gaps = 44/337 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---- 298
           + ++ D +     ++         G   +  F        +  Y    P+L    +    
Sbjct: 253 YFDRLDFMEVETPMMH-----VLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVVGG 307

Query: 299 MHNVTEHFVH-SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQPGL 356
              V E   +     V S+        E +   A          D +++  +   G   L
Sbjct: 308 FERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEIL 367

Query: 357 AYIFWRLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            Y  ++++  G    +     + K+ + +  E +      +            ++     
Sbjct: 368 EYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKK---IAEKLKIKVEAYHEL 424

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               N I +E   +     +  +I D+P               +P    Q G        
Sbjct: 425 GHLINEIFEE--TVEHQLIQPTFITDYP------------AVVSPLARRQDGNPEFTD-- 468

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  +++      E+A+G    + +E   + F     +     +          RA 
Sbjct: 469 -------RFEFFIGAREVANGFSELNDAEDQAERFRKQVEAAASGDDEAMPYDKDYIRAL 521

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP  G   GIDR+VM L  ++++R+V LFP  +
Sbjct: 522 EYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFPHMK 558


>gi|89257151|ref|YP_514513.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|167011048|ref|ZP_02275979.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254368375|ref|ZP_04984393.1| lysyl-tRNA ligase [Francisella tularensis subsp. holarctica 257]
 gi|290954113|ref|ZP_06558734.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295312498|ref|ZP_06803266.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89144982|emb|CAJ80342.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|134254183|gb|EBA53277.1| lysyl-tRNA ligase [Francisella tularensis subsp. holarctica 257]
          Length = 560

 Score =  206 bits (524), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 17/300 (5%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV            
Sbjct: 106 RYTDKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPDGQY 165

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++ ++   LC  G ++  +      N  TG++ + A   EIL+ A   PLP        +
Sbjct: 166 ETFKN---LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHGLADQ 219

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++       A    
Sbjct: 220 EMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAAAKPF 279

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  L+  M
Sbjct: 280 KTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGISSRHNP-EFTMLEFYM 338

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPD 292
           ++ + +D+++  E++L  + +E      +            + RI   D+I +Y  D   
Sbjct: 339 AYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYNDDITK 398



 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 51/337 (15%), Positives = 106/337 (31%), Gaps = 44/337 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---- 298
           + ++ D +     ++         G   +  F        +  Y    P+L    +    
Sbjct: 253 YFDRLDFMEVETPMMH-----VLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVVGG 307

Query: 299 MHNVTEHFVH-SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQPGL 356
              V E   +     + S+        E +   A          D +++  +   G   L
Sbjct: 308 FERVYEINRNFRNEGISSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEIL 367

Query: 357 AYIFWRLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            Y  ++++  G    +     + K+ + +  E +      +            ++     
Sbjct: 368 EYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKK---IAEKLKIKVEAYHEL 424

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               N I +E   +     +  +I D+P               +P    Q G        
Sbjct: 425 GHLINEIFEE--TVEHQLIQPTFITDYP------------AVVSPLARRQDGNPEFTD-- 468

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  +++      E+A+G    + +E   + F     +     +          RA 
Sbjct: 469 -------RFEFFIGAREVANGFSELNDAEDQAERFRKQVEAAASGDDEAMPYDKDYIRAL 521

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP  G   GIDR+VM L  ++++R+V LFP  +
Sbjct: 522 EYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFPHMK 558


>gi|55820759|ref|YP_139201.1| lysyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55736744|gb|AAV60386.1| lysyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
          Length = 511

 Score =  206 bits (524), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 67/340 (19%), Positives = 126/340 (37%), Gaps = 30/340 (8%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             ++     ++G +   R  G + F  I+D  G  Q+    
Sbjct: 52  RTATSGQLKEKYADKTKEELHEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRK 111

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 112 DAVGEENYEIFKKADL----GDFLGVEGEIMRTDM--GELSIKATHITHLSKALR-PLPE 164

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  + A+ F+E  TP+L   +
Sbjct: 165 KFHGLSDIETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYLDAQGFLEVETPVLHNEA 224

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 225 GGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRVFRNEGMDATHNP-E 283

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  +++  ++ +  DI+N  E +++   +       ++           F RI   DAI+
Sbjct: 284 FTTIEVYQAYADFHDIMNLTEGIIQHAAKAVKGDGPINYQGTEIKINEPFKRIHMVDAIK 343

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
                  D    + +             V      V    
Sbjct: 344 E--ITGVDFWQDMTLDEAKAIAAEKNVPVEKHYTEVGHII 381



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K N        +++L     E  +     +     L  F     +KE+ ++   G     
Sbjct: 411 KKNPEDPRFTDRFELFIMTKEYGNAFTELNDPIDQLSRFEAQAAAKELGDDEATGIDYDY 470

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 471 VEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 511


>gi|319891471|ref|YP_004148346.1| class II Lysyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161167|gb|ADV04710.1| class II Lysyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 495

 Score =  206 bits (524), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 138/373 (36%), Gaps = 26/373 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   +  S   ++G +   R  G   F  ++D  G  Q+    D           +  +
Sbjct: 51  ELAEKETESHTVIAGRIMTKRGKGKAGFAHVQDLSGQIQIYVRKDQVGDAQFGIWNTADL 110

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             I G+      E I     TG++ + A+  ++LS A   PLP           R++ R+
Sbjct: 111 GDIVGV------EGIMFKTNTGELSVKAKSFKLLSKALR-PLPDKHHGLQDIEQRYRQRY 163

Query: 131 LDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDL  +         R+RI+  MR  +  + F+E  TP++   +   A    V       
Sbjct: 164 LDLITNEESTQTFINRSRILQEMRNYLNEKGFLEVETPMMHQIAGGAAAKPFVTHHNALD 223

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +   +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ +  DI
Sbjct: 224 ATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYKDI 282

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++  E ++  +        +V      I  +   RR             M +  +     
Sbjct: 283 MSLTEELVAHIARRVLGTTSVQYGDETINLEPQWRRLH-----------MVDAVKEATGV 331

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
           +   F ++ S    +E+          N  +   +NE+   + +  L    +     G+ 
Sbjct: 332 D---FYEVKSDKEAHELAKAHGIEVDDNMKYGHILNEFFEQKVEETLIQPTFIY---GHP 385

Query: 370 AGMGPVAKHLNIV 382
             + P+AK     
Sbjct: 386 IEISPLAKKNPED 398



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           F+E   EE  I      F       +  L   +    +   +++L   G E A+     +
Sbjct: 366 FFEQKVEETLIQPT---FIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELN 422

Query: 500 MSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 Q F    + KE               A + GMPP GG+  GIDR+VMLL  + +
Sbjct: 423 DPIDQRQRFEAQLVEKEQGNDEAHEMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTNSPS 482

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  + 
Sbjct: 483 IRDVLLFPYMRQ 494


>gi|118496782|ref|YP_897832.1| lysyl-tRNA synthetase [Francisella tularensis subsp. novicida U112]
 gi|194324537|ref|ZP_03058309.1| lysyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
 gi|118422688|gb|ABK89078.1| lysyl-tRNA synthetase [Francisella novicida U112]
 gi|194321372|gb|EDX18858.1| lysyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
          Length = 576

 Score =  206 bits (524), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 17/300 (5%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV            
Sbjct: 122 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPDGQY 181

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++ ++   LC  G ++  +      N  TG++ + A   EIL+ A   PLP        +
Sbjct: 182 ETFKN---LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHGLADQ 235

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++       A    
Sbjct: 236 EMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAAAKPF 295

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  L+  M
Sbjct: 296 KTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTMLEFYM 354

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPD 292
           ++ + +D+++  E++L  + +E      +            + RI   D+I +Y  D   
Sbjct: 355 AYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYNDDITK 414



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 106/337 (31%), Gaps = 44/337 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---- 298
           + ++ D +     ++         G   +  F        +  Y    P+L    +    
Sbjct: 269 YFDRLDFMEVETPMMH-----VLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVVGG 323

Query: 299 MHNVTEHFVH-SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQPGL 356
              V E   +     V S+        E +   A          D +++  +   G   L
Sbjct: 324 FERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEIL 383

Query: 357 AYIFWRLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            Y  ++++  G    +     + K+ + +  E +      +            ++     
Sbjct: 384 EYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKK---IAEKLKIKVEAYHEL 440

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               N I +E   +     +  +I D+P               +P    Q G        
Sbjct: 441 GHLINEIFEE--TVEHQLIQPTFITDYP------------AVVSPLARRQDGNPEFTD-- 484

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  +++      E+A+G    + +E   + F     +     +          RA 
Sbjct: 485 -------RFEFFIGAREVANGFSELNDAEDQAERFRKQVEAAASGDDEAMPYDKDYIRAL 537

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP  G   GIDR+VM L  ++++R+V LFP  +
Sbjct: 538 EYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFPHMK 574


>gi|254372145|ref|ZP_04987637.1| hypothetical protein FTCG_01528 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569875|gb|EDN35529.1| hypothetical protein FTCG_01528 [Francisella novicida GA99-3549]
          Length = 575

 Score =  206 bits (524), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 17/300 (5%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV            
Sbjct: 121 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPDGQY 180

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++ ++   LC  G ++  +      N  TG++ + A   EIL+ A   PLP        +
Sbjct: 181 ETFKN---LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHGLADQ 234

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++       A    
Sbjct: 235 EMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAAAKPF 294

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  L+  M
Sbjct: 295 KTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTMLEFYM 353

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPD 292
           ++ + +D+++  E++L  + +E      +            + RI   D+I +Y  D   
Sbjct: 354 AYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYNDDITK 413



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 106/337 (31%), Gaps = 44/337 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---- 298
           + ++ D +     ++         G   +  F        +  Y    P+L    +    
Sbjct: 268 YFDRLDFMEVETPMMH-----VLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVVGG 322

Query: 299 MHNVTEHFVH-SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQPGL 356
              V E   +     V S+        E +   A          D +++  +   G   L
Sbjct: 323 FERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEIL 382

Query: 357 AYIFWRLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            Y  ++++  G    +     + K+ + +  E +      +            ++     
Sbjct: 383 EYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKK---IAEKLKIKVEAYHEL 439

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               N I +E   +     +  +I D+P               +P    Q G        
Sbjct: 440 GHLINEIFEE--TVEHQLIQPTFITDYP------------AVVSPLARRQDGNPEFTD-- 483

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  +++      E+A+G    + +E   + F     +     +          RA 
Sbjct: 484 -------RFEFFIGAREVANGFSELNDAEDQAERFRKQVEAAASGDDEAMPYDKDYIRAL 536

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP  G   GIDR+VM L  ++++R+V LFP  +
Sbjct: 537 EYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFPHMK 573


>gi|229148486|ref|ZP_04276743.1| Lysyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228635028|gb|EEK91600.1| Lysyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 499

 Score =  206 bits (524), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 60/318 (18%), Positives = 130/318 (40%), Gaps = 25/318 (7%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G+    ++      V ++G +   R  G   F  ++D +G  Q+    D+   +  +  +
Sbjct: 49  GEFSKEELEEKEIAVSIAGRIMTKRGKGKAGFAHVQDLHGQVQIYVRKDAVGDDEYELFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +    G ++    +    N+  G++ + A    +L+ +   PLP           R+
Sbjct: 109 TADL----GDLVGIEGKVFKTNV--GELSVKATGFTLLTKSLR-PLPDKYHGLKDVEQRY 161

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F    
Sbjct: 162 RQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFTTHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ 
Sbjct: 222 NALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYA 279

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRN 295
           +  DI+   E+++  + ++     T+            + R+   DAI++Y     D  N
Sbjct: 280 DYKDIMKLTEDMVAHIAKKVLGTTTIQYGDYEINLEPEWTRLHMVDAIKQY--SGADFWN 337

Query: 296 PIIMHNVTEHFVHSEFRV 313
           P+ +    E        +
Sbjct: 338 PMSVEEARELAKEHNVEI 355



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   +  E   I++  F+E   E+K I      +  P       K ND  S 
Sbjct: 345 RELAKEHNVEIKDTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDEDSR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|312278089|gb|ADQ62746.1| Lysyl-tRNA synthetase [Streptococcus thermophilus ND03]
          Length = 496

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 67/340 (19%), Positives = 126/340 (37%), Gaps = 30/340 (8%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             ++     ++G +   R  G + F  I+D  G  Q+    
Sbjct: 37  RTATSGQLKEKYADKTKEELHEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  + A+ F+E  TP+L   +
Sbjct: 150 KFHGLSDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYLDAQGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRVFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  +++  ++ +  DI+N  E +++   +       ++           F RI   DAI+
Sbjct: 269 FTSIEVYQAYADFHDIMNLTEGIIQHAAKAVKGDGPINYQGTEIKINEPFKRIHMVDAIK 328

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
                  D    + +             V      V    
Sbjct: 329 E--ITGVDFWQDMTLEEAKVIAAEKNVPVEKHYTEVGHII 366



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K N        +++L     E  +     +     L  F +   +KE+ ++   G     
Sbjct: 396 KKNPEDPRFTDRFELFIMTKEYGNAFTELNDPIDQLSRFESQAAAKELGDDEATGIDYDY 455

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 456 VEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|312877912|ref|ZP_07737856.1| lysyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795304|gb|EFR11689.1| lysyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 497

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 71/322 (22%), Positives = 135/322 (41%), Gaps = 24/322 (7%)

Query: 6   THSCGDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   D+  +     G FV ++G +   R HG   F+DI D  G  Q+    D    E  
Sbjct: 43  THYSTDIKENFEVFEGKFVCVAGRMLSKRGHGKASFVDILDTKGKIQIYIKIDEVGEEKY 102

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  +  + +   G ++    E        G+I + A++IE+L+     PLP         
Sbjct: 103 EEFKEYYDI---GDIIGVKGEVF--KTHKGEISVKAKEIEMLTKCLR-PLPEKWHGLRDI 156

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL  +   ++  +KR+ II S+R  +    F+E  TP+L+  +    AR F
Sbjct: 157 DTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFLDDRGFLEVETPVLSPVAGGAAARPF 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + + + L+  GFD+ +++   FR+E       P EF  +++ 
Sbjct: 217 ITHHNALDIDLY-LRIATELHLKRLIVGGFDKVYELGRVFRNEGISIKHNP-EFTTIEIY 274

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKP 291
            ++ +  +++   E ++  V +E      ++           + R+   +AI++Y     
Sbjct: 275 QAYADYKEMMELTEKLITTVAQEVLGTLKITYQRQEIDLTPPWQRLTMVEAIKKY--VGV 332

Query: 292 DLRNPIIMHNVTEHFVHSEFRV 313
           D  N   +    +        V
Sbjct: 333 DFENVTSLDEARKIAKDLGIEV 354



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 7/161 (4%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
            +   +AR  IA++LGI     ++   I++   +E   E+  +          +    + 
Sbjct: 337 VTSLDEAR-KIAKDLGIEVEENWQVGHIIN-EVFEKKVEDFLVQPTFIMDYPVEVSPLAK 394

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
           +  D       +++L     EIA+     +      + F      ++             
Sbjct: 395 RKKDNPQF-TERFELFITCREIANAFSELNDPFDQKERFLEQLKERQRGNQEAHMMDEDF 453

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+VMLL  + ++R+V LFP  +
Sbjct: 454 IEALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLFPTMR 494


>gi|212637922|ref|YP_002314442.1| lysyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212559402|gb|ACJ32457.1| Lysyl-tRNA synthetase (class II) [Anoxybacillus flavithermus WK1]
          Length = 494

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 72/390 (18%), Positives = 146/390 (37%), Gaps = 38/390 (9%)

Query: 5   RTHSCGDL-------GVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   +L          ++      V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 34  RTHQAEELFTLYGHLSKEELEEKQIHVSIAGRIMTKRGKGKAGFAHIQDLTGQIQIYVRK 93

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +   +  +  I G+      +        G++ +     E+L+ +   PLP 
Sbjct: 94  DDVGEEQYEIFDTSDLGDIVGV------QGTVFKTKVGELSIKVHSYEMLTKSLR-PLPE 146

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +   K   + R+ II SMR  +  + ++E  TP++ + +
Sbjct: 147 KYHGLKDIEQRYRQRYLDLIMNPESKKTFITRSLIIQSMRRYLDQKGYLEVETPMMHSIA 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+        + Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 207 GGAAARPFITHHNALDMTLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP- 264

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L++  ++ +  DI+   E+++  + +E      +               YG  + D
Sbjct: 265 EFTMLELYEAYADYTDIMRLTEDMIAHIAQEVLGTTKIQ--------------YGEHEVD 310

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
           L       ++ +         F K +S     ++          +  F   +NE+   + 
Sbjct: 311 LTPSWKRLHMVDAIKDYVGVDFWKHMSDEEARQLAKEHGVEVAPHMTFGHIVNEFFEQKV 370

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
           +  L    +     G+   + P+AK     
Sbjct: 371 EQHLIQPTFIY---GHPVEISPLAKKNPED 397



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 6/152 (3%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A+E G+       F  I++  F+E  + E+ +      +  P       K N       
Sbjct: 344 LAKEHGVEVAPHMTFGHIVN-EFFEQ-KVEQHLIQPTFIYGHPVEISPLAKKNPEDPRFT 401

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPP 535
            +++L     E A+     +      + F      KE               A + GMPP
Sbjct: 402 DRFELFIVAREHANAFTELNDPIDQRERFEAQLREKEQGNDEAHEMDEDFIEALEYGMPP 461

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            GG+  GIDR+VMLL  + ++R+V LFP  ++
Sbjct: 462 TGGLGIGIDRLVMLLTNSPSIRDVLLFPQMRH 493


>gi|94267598|ref|ZP_01290933.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
 gi|93451927|gb|EAT02649.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
          Length = 493

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 63/293 (21%), Positives = 118/293 (40%), Gaps = 15/293 (5%)

Query: 6   THSCGDL------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           +H   +L        +  G    ++G +  +R  G   FL ++D  G  QV    D    
Sbjct: 35  SHRIKELLPGPDPEAALAGGNKAVAGRIMALRRFGKAAFLHLQDSSGRIQVHVKRDEIGQ 94

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +   + +   V    G + + S         TG++ + A  +++L+ +   PLP      
Sbjct: 95  QAYATFKKFDV----GDIAAFSGPLFRTK--TGEVTIQALSVKLLTKSLR-PLPEKFHGL 147

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRT-RIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                R++ R++DL  +   ++  +R   II+ +R  +    F+E  TP++ A +     
Sbjct: 148 TDIETRYRQRYVDLMVNPEVRDTFRRRVEIIHLVRDFLTNRGFLEVETPMMQAIAGGATA 207

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                     G    L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  L+
Sbjct: 208 KPFKTHHNALGLDLYLRIAPELYLKRLLVGGFERVFEINRNFRNEGLSTRHNP-EFTMLE 266

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
              ++   D+++   E +L  V  E      ++     +      RRY  D+ 
Sbjct: 267 FYQAYATYDELMELAEEMLSWVAMEVCGTMQINYQGQEVDLAPPWRRYTMDEA 319



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 7/127 (5%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
            +E   E+K ID      T     +  L + N        +++L   G E+A+     + 
Sbjct: 361 LFELLVEDKLIDPTF--ITAYPTEVSPLARRNQENPEITDRFELFITGREMANAFSELND 418

Query: 501 SEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
            +   Q        +   E  F        RA + GMPP  G   GIDR+ MLL  A ++
Sbjct: 419 PDDQRQRLEKQIAERGSDEEIFPVLDEDFLRALEYGMPPAAGCGVGIDRLTMLLTDAPSI 478

Query: 557 REVSLFP 563
           R+V LFP
Sbjct: 479 RDVILFP 485


>gi|238897259|ref|YP_002922936.1| lysine tRNA synthetase, inducible [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|229465014|gb|ACQ66788.1| lysine tRNA synthetase, inducible [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 504

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/362 (21%), Positives = 133/362 (36%), Gaps = 39/362 (10%)

Query: 7   HSCGDLGVSD----------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           H  GDL              +   V L+G +   R  G   F  ++D  G  Q+  + D 
Sbjct: 43  HFSGDLHTEYDHKENEELIALNKEVILAGRMMTRRIMGKASFFTLQDTKGRIQLYVSRDD 102

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
               I      +W L   G ++            TG++ +   ++ +L+ A   PLP   
Sbjct: 103 LPEGIYNEDFKKWDL---GDILGVRGRLF--KTKTGELSVHCTELRLLTKALR-PLPDKF 156

Query: 117 EREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
                +  R++ R+LDL  +    KN + R++ I+ +R  M+ + F+E  TP++ +    
Sbjct: 157 HGLLDQEARYRQRYLDLIVNEKSRKNFILRSKTISMLRQFMMGKGFMEVETPMMQSIPGG 216

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR FL          Y L  AP+ Y + L+  GFDR F+I   FR+E       P EF
Sbjct: 217 AAARPFLTHHNALNIDMY-LRIAPELYLKRLVVGGFDRIFEINRNFRNEGISLRHNP-EF 274

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
             +++ M++ +  D++   E + R +       +              + +YG    D  
Sbjct: 275 TMMELYMAYADHQDLIELTEELFRELTLNVLGTH--------------VVKYGEHIFDFS 320

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEWAR 349
            P     + E        +    L       + A        K     R  C+   E A 
Sbjct: 321 QPFQKWTMKEAIQKYRPEININDLEDKNKAILIAESLDVRVEKFWELGRIQCEIFEETAE 380

Query: 350 SQ 351
             
Sbjct: 381 KH 382



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 71/197 (36%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R  +++ D         +     + + D R     ELG I C  FE
Sbjct: 322 PFQKWTMKEAIQKYRPEININD-----LEDKNKAILIAESLDVRVEKFWELGRIQCEIFE 376

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          EK +         P       + ND  S  A +++    G EI +
Sbjct: 377 ------------ETAEKHLIQPTFITEYPAEVSPLARRNDHNSFIADRFEFFIAGKEIGN 424

Query: 494 GGIRNHMSEVMLQAFSNV----GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F+              +       A + G+PP  G+  GIDR++ML
Sbjct: 425 GFSELNDAEDQAQRFTEQLNSKEKGDHEAMSYDQDYIIALEHGLPPTAGLGIGIDRMIML 484

Query: 550 LLGAKNVREVSLFPMSQ 566
           L  + N+R+V LFP  +
Sbjct: 485 LTNSINIRDVILFPTMR 501


>gi|229844834|ref|ZP_04464972.1| lysyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229812215|gb|EEP47906.1| lysyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 502

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 67/289 (23%), Positives = 126/289 (43%), Gaps = 19/289 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+++G +   R  G   F+ I+D  G  Q+    D+    +       W L   G ++ 
Sbjct: 63  EVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDL---GDIIG 119

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL- 138
                      T ++ +   ++++L+ A   PLP        + +R++ R+LDL  +   
Sbjct: 120 VKGTLF--KTKTNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLDLISNEES 176

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            +  + R++++  +R   I++ F+E  TP+L        AR F+          Y L  A
Sbjct: 177 RRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMY-LRIA 235

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+++  E +L
Sbjct: 236 PELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNTEELL 294

Query: 258 RGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           R +  +  +   V            F RI   DA  +YG DK  ++  +
Sbjct: 295 RKLAIDILSTTIVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDL 343



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 12/180 (6%)

Query: 396 GDSCFFIAGDPLKFCSFAADA-RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            D+      D         D  R    A+ LGI     +    I++   +E   E   I 
Sbjct: 326 HDATIKYGADKGIVKEDLYDFNRAKATAERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQ 384

Query: 454 FAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                F M      S     ND       +++L   G EI +G    + +E   + F   
Sbjct: 385 PT---FLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQ 441

Query: 512 GISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 442 VAAKEAGDDEAMFKDDDFVVALEHGLPPTAGEGLGIDRLAMLYANASSIRDVILFPAMRQ 501


>gi|30018348|ref|NP_829979.1| lysyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206972583|ref|ZP_03233526.1| lysyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218232500|ref|YP_002364927.1| lysyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228919027|ref|ZP_04082407.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228950625|ref|ZP_04112760.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228956518|ref|ZP_04118315.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229039982|ref|ZP_04189746.1| Lysyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229107763|ref|ZP_04237400.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229125594|ref|ZP_04254627.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229142883|ref|ZP_04271325.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229176677|ref|ZP_04304082.1| Lysyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|229188362|ref|ZP_04315411.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|296500912|ref|YP_003662612.1| lysyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|39932142|sp|Q81J70|SYK_BACCR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226737091|sp|B7HJ16|SYK_BACC4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|29893888|gb|AAP07180.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206732485|gb|EDZ49664.1| lysyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218160457|gb|ACK60449.1| lysine--tRNA ligase [Bacillus cereus B4264]
 gi|228595161|gb|EEK52931.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228606844|gb|EEK64260.1| Lysyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228640595|gb|EEK96983.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228657911|gb|EEL13716.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228675736|gb|EEL30943.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228727390|gb|EEL78583.1| Lysyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228803208|gb|EEM50029.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228809100|gb|EEM55584.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228840676|gb|EEM85937.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|296321964|gb|ADH04892.1| lysyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 499

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 60/318 (18%), Positives = 130/318 (40%), Gaps = 25/318 (7%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G+    ++      V ++G +   R  G   F  ++D +G  Q+    D+   +  +  +
Sbjct: 49  GEFSKEELEEKEIAVSIAGRIMTKRGKGKAGFAHVQDLHGQVQIYVRKDAVGDDEYELFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +    G ++    +    N+  G++ + A    +L+ +   PLP           R+
Sbjct: 109 TADL----GDLVGIEGKVFKTNV--GELSVKATGFTLLTKSLR-PLPDKYHGLKDVEQRY 161

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F    
Sbjct: 162 RQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFTTHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ 
Sbjct: 222 NALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYA 279

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRN 295
           +  DI+   E+++  + ++     T+            + R+   DAI++Y     D  N
Sbjct: 280 DYKDIMKLTEDMVAHIAKKVLGTTTIQYGDYEINLEPEWTRLHMVDAIKQY--SGADFWN 337

Query: 296 PIIMHNVTEHFVHSEFRV 313
           P+ +    E        +
Sbjct: 338 PMSVEEARELAKEHNVEI 355



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   +  E   I++  F+E   E+K I      +  P       K ND    
Sbjct: 345 RELAKEHNVEIKDTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDEDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|303228849|ref|ZP_07315662.1| lysine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516469|gb|EFL58398.1| lysine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 503

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 66/286 (23%), Positives = 126/286 (44%), Gaps = 20/286 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              V ++G +  +R HG   F +IRD  G  QV    D    +  K V+   +  I GL 
Sbjct: 56  DQPVVIAGRLMTMRSHGKTAFANIRDLSGDIQVYFRKDVLGEDNYKYVKMLDIGDIVGL- 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                E       +G++ +   K+ +LS A   PLP          +R++ R++DL  + 
Sbjct: 115 -----EGHVFRTHSGEVTIKVDKLTLLSKALR-PLPEKWHGLKDTELRYRQRYVDLIVNP 168

Query: 138 LHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
             ++  +KR++I+  +R  M+ + F+E  TP++        AR F+          Y + 
Sbjct: 169 EVRDTFIKRSKIVAKIREYMMNDGFMEVETPMMHPIPGGAAARPFITHHNALDIDIY-MR 227

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G +R F++  CFR+E    +R   EF  ++   ++ + +D +   EN
Sbjct: 228 IAPELYLKRLIVGGMERVFEMNRCFRNEGID-NRHNPEFTTIESYQAYGDVEDAIRLTEN 286

Query: 256 VLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           ++    +E      ++           + RI   + +++Y  +  D
Sbjct: 287 LVSYCAQEVLGTQEITYQGTEINLTPPWNRITMAEGVKKYTGEDFD 332



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 70/169 (41%), Gaps = 11/169 (6%)

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE--KKIDFAHNPFTM 461
           G+     +   +AR  IA  L +   +      I++  F ++ EE   +      +P  +
Sbjct: 328 GEDFDAVTTVEEAR-AIADRLNVEYTDNDGIGKILNACFEDYVEENLIQPTIVYGHPKEI 386

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
                 S +      +   +++    G E+A+G    +      Q F +    +E  ++ 
Sbjct: 387 SPLAKASRENP----LATERFEAFIYGRELANGFSELNDPIDQKQRFLDQLKEREAGDDE 442

Query: 522 F----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                     A + G+PP  G+  GIDR+VM L  + ++R+V LFP+ +
Sbjct: 443 AHRMDEDFVNALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLFPLMK 491


>gi|326203393|ref|ZP_08193258.1| lysyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325986651|gb|EGD47482.1| lysyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 499

 Score =  206 bits (524), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 71/348 (20%), Positives = 129/348 (37%), Gaps = 23/348 (6%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           T +  D   +  G    ++G +   R  G   F D++D  G  Q+    D    E+ +  
Sbjct: 49  TKNIIDNFEAQEGQTASIAGRLMSKRGMGKAGFCDLQDRDGKIQLYVRKDEVGDEVYEMF 108

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           +   +  I G+      +        G+I +  ++I  L     LPLP          +R
Sbjct: 109 KKYDIGDIVGV------KGEIFKTHKGEISIKVKEIT-LLSKSLLPLPEKWHGLKDTDLR 161

Query: 126 FKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP 183
           ++ R++DL  +   KN  + R++II S+R  +    F+E  TP+L T      AR F+  
Sbjct: 162 YRQRYVDLIVNPEVKNTFILRSKIIKSIRKFLDNRGFLEVDTPLLNTIPGGATARPFVTH 221

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  G ++ +++   FR+E       P EF  +++  ++
Sbjct: 222 HNTLDIDMY-LRIAPELYLKRLIVGGMEKVYEMGRMFRNEGMSVKHNP-EFTMMEVYEAY 279

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            +   ++   EN++  V  E      +      I                 N + M    
Sbjct: 280 NDYKGMMELTENLISTVAMETLGTTKIQYQGQDIDLTPPW-----------NRMTMIEAV 328

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-NEWARS 350
           + F   +F             E   +  K G       + M  E+  S
Sbjct: 329 KKFSGIDFDTIKTDEEAKAAAESKKVHVKEGMVRGEILNLMFEEFVES 376



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 64/192 (33%), Gaps = 27/192 (14%)

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL--GIINCNCFEFCWIM 438
               +   +  D    D     A +  K        R  I   +    +  N  +  +I 
Sbjct: 326 EAVKKFSGIDFDTIKTDEEAKAAAESKKVHVKEGMVRGEILNLMFEEFVESNLVQPTFIY 385

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D+P               +P T  +     L           +++    G E+ +     
Sbjct: 386 DYP------------VEISPLTKRKPNCPEL---------TERFEFFITGREMGNAYSEL 424

Query: 499 HMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +        F +    ++  +            A + GMPP GG+  G+DR+++LL  + 
Sbjct: 425 NDPIDQKDRFISQVKKRDSGDEEANMMDDDYVTALEYGMPPTGGLGIGVDRLIILLTDSA 484

Query: 555 NVREVSLFPMSQ 566
           ++R++ LFP  +
Sbjct: 485 SIRDIMLFPTMK 496


>gi|257879864|ref|ZP_05659517.1| lysyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|294618638|ref|ZP_06698177.1| lysyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|257814092|gb|EEV42850.1| lysyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|291595157|gb|EFF26495.1| lysyl-tRNA synthetase [Enterococcus faecium E1679]
          Length = 498

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 69/318 (21%), Positives = 130/318 (40%), Gaps = 32/318 (10%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            +++G    ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSEELHELFDPRTKEELAEMGLTASVAGRMMTRRGKGKTGFAHLQDREGQIQIYVRK 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G     + + +     TG++ + A +I ILS A   PLP 
Sbjct: 100 DQVGDEAYEVFKHADL----GDFFGVTGQIM--KTDTGEVSIKASEITILSKALR-PLPD 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +       +KR++II+ +R  +    +IE  TP+L   +
Sbjct: 153 KYHGLTNIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYLDGNGYIEVETPVLHNEA 212

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 213 GGAAARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP- 270

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  L+   ++ + +D++N  E ++R   E+      ++          +F RI   DAI
Sbjct: 271 EFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAVDLESDFKRIHMVDAI 330

Query: 284 RRYGTDKPDLRNPIIMHN 301
           +       D    + +  
Sbjct: 331 KE--QTGVDFWQEMTLEE 346



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E+ +      +  P       K N        +++L   G E A+     +      + F
Sbjct: 377 EETLTQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFTELNDPIDQRERF 436

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +E+  +           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP 
Sbjct: 437 EAQEKERELGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPT 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|33152397|ref|NP_873750.1| lysyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|39932104|sp|Q7VLU5|SYK_HAEDU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33148620|gb|AAP96139.1| lysyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 498

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 68/302 (22%), Positives = 126/302 (41%), Gaps = 24/302 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + D    V++ G +   R  G   F  I+D  G  Q+    D+    +       W L  
Sbjct: 55  LKDADVQVKVVGRIMLKRVMGKASFFTIQDVSGQIQLYVARDNLAEGVYVDNVGLWDL-- 112

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++            TG++ +    +E+L+ +   PLP   +    + +R++ R+LDL
Sbjct: 113 -GDIVGVCGTLF--KTKTGELTVRCADVELLTKSLR-PLPNKHQGLVDQEMRYRQRYLDL 168

Query: 134 RRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +    +  V R+++++ +R   +   F+E  TP+L        A+ F+          
Sbjct: 169 IANEQSRRTFVIRSQVVSGIRQFFLERGFMEVETPMLQVIPGGAAAKPFVTHHNALDVDM 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +  D+++
Sbjct: 229 Y-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMIEYYQAYADYHDLMD 286

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGT-----DKPDLRNPI 297
             E +LR +  +      V            F RI   DAI +YG      D  D+   +
Sbjct: 287 NTEQLLRKLALDILGTTAVPYGEYQFDFGQPFERITMHDAIVKYGNGIAREDLDDIEKAV 346

Query: 298 IM 299
            +
Sbjct: 347 EI 348



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 10/156 (6%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLL 475
             IA++LGI     +    +++   +E   E + I      F M      S     ND  
Sbjct: 346 VEIAKKLGIEVQKSWGLGAVVNA-IFEEVAEHQLIQPT---FLMAHPAEISPLARRNDEN 401

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQC 531
                +++L   G EI +G    + +E     F     +K+  ++           A + 
Sbjct: 402 PEVTDRFELFIGGREIGNGFSELNDAEDQAARFDAQVAAKDAGDDEAMFKDDDFVVALEH 461

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+PP  G   GIDR+VM+   A ++R+V LFP  ++
Sbjct: 462 GLPPTAGEGLGIDRLVMIFANAPSIRDVILFPAMRH 497


>gi|33862420|ref|NP_893980.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|39932063|sp|Q7U3A4|SYK_PROMM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33640533|emb|CAE20322.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
          Length = 508

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 66/359 (18%), Positives = 135/359 (37%), Gaps = 29/359 (8%)

Query: 6   THSCGDLGVSDV----GSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           +HS  +L         G      V ++G V   R  G + F  + D  G  Q+     + 
Sbjct: 38  SHSTANLQADHADLAKGEERLLTVSVAGRVMTRRVMGKLAFYTLADETGTIQLYLEKATI 97

Query: 58  CFEIAKSVRSEWVLCIDGLVMS---RSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
               +  + S   + +  LV +        +      G++ +  Q+ +ILS + + PLP 
Sbjct: 98  DAAASNELASGTFVQLTTLVDAGDWIGVTGVLRRTDRGELSVKVQQWQILSKSLQ-PLPD 156

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAENFIECSTPILTASS 173
                     R++ R+LDL      +   +R   +++++R  +    F+E  TP+L A +
Sbjct: 157 KWHGLADVEKRYRQRYLDLIVSPQSRETFRRRALMVSAIRRWLDDRAFLEIETPVLQAEA 216

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  GF+R +++   FR+E   +   P 
Sbjct: 217 GGAEARPFITHHNTLDLPLY-LRIATELHLKRLVVGGFERVYELGRIFRNEGMSTRHNP- 274

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  D++   E ++  V  +      ++   + I      RR       
Sbjct: 275 EFTSVEVYQAYADYIDMMVLTEQLISSVCTQICGSTRITYQGIEIDLTPPWRR------- 327

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSK--ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
                 MH + +     +F  F    + +         +P+K     R   +   +   
Sbjct: 328 ----ASMHELVQEATGLDFMGFKDLAVAASAMARVGLEVPSKADSVGRLLNEAFEQAVE 382



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPP 535
            +++L   G E A+            Q        ++              +A + GMPP
Sbjct: 413 ERFELFIVGRETANAFSELIDPLDQRQRLEAQQARRQAGDLEAHGVDEDFLQALEVGMPP 472

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG+  GIDR+VML   + ++R+V  FP
Sbjct: 473 TGGLGIGIDRLVMLFTDSPSIRDVIAFP 500


>gi|308174027|ref|YP_003920732.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307606891|emb|CBI43262.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328552847|gb|AEB23339.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328912355|gb|AEB63951.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 430

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 85/321 (26%), Positives = 128/321 (39%), Gaps = 34/321 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVL 71
              G  V +  WV   R  G I FL +RD  G  Q   V A  +   F+IAKSV  E  L
Sbjct: 10  KHTGEEVTIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEENIFQIAKSVTQETSL 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G+V       +         EL+   IE++  A + P+     +E+       +R L
Sbjct: 70  YVKGIVKEDERSPL-------GYELAVTSIEVIHEATDYPITP---KEHGTEFLMDHRHL 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR    H  +  R  II +       E F++   PILT S+PEG  +       ++ +F
Sbjct: 120 WLRSKRQHAIMKIRNEIIRATYEFFNKEGFVKVDPPILTGSAPEGTTELFATKYFDEDAF 179

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L 
Sbjct: 180 --LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFEENLE 236

Query: 252 TMENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRY---GTDKPDL 293
             EN +  + +       +  N               F RI YD AI      G D  + 
Sbjct: 237 VQENYVAYIVQSVLKNCKIELNTLGRDTSKLEQIKAPFPRITYDKAIEFLKEKGFDDIEW 296

Query: 294 RNPIIMHNVTEHFVHSEFRVF 314
            +     + T      +  VF
Sbjct: 297 GDDFGAPHETAIAESYDKPVF 317



 Score = 67.4 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 50/140 (35%), Gaps = 26/140 (18%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDL 484
           I  +  +  +I  +P             +  PF M         +   DL++ + +    
Sbjct: 308 IAESYDKPVFITHYP------------TSLKPFYMQPAKDRDDVVLCADLIAPEGYG--- 352

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
                EI  G  R H  +++ +     G+      + +       Q G  PH G   G++
Sbjct: 353 -----EIIGGSERVHDMDLLEERLKEHGLD----SDAYKWYAELRQYGSVPHSGFGLGLE 403

Query: 545 RIVMLLLGAKNVREVSLFPM 564
           R V  + GA +VRE   FP 
Sbjct: 404 RTVAWISGAPHVRETIPFPR 423


>gi|208780603|ref|ZP_03247942.1| lysyl-tRNA synthetase [Francisella novicida FTG]
 gi|208743578|gb|EDZ89883.1| lysyl-tRNA synthetase [Francisella novicida FTG]
          Length = 560

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 17/300 (5%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV            
Sbjct: 106 RYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPDGQY 165

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++ ++   LC  G ++  +      N  TG++ + A   EIL+ A   PLP        +
Sbjct: 166 ETFKN---LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHGLADQ 219

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +   + + K R+++++ +R      +F+E  TP++       A    
Sbjct: 220 EMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAAAKPF 279

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  L+  M
Sbjct: 280 KTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTMLEFYM 338

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPD 292
           ++ + +D+++  E++L  + +E      +            + RI   D+I +Y  D   
Sbjct: 339 AYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYNDDITK 398



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 106/337 (31%), Gaps = 44/337 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---- 298
           + ++ D +     ++         G   +  F        +  Y    P+L    +    
Sbjct: 253 YFDRLDFMEVETPMMH-----VLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVVGG 307

Query: 299 MHNVTEHFVH-SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQPGL 356
              V E   +     V S+        E +   A          D +++  +   G   L
Sbjct: 308 FERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEIL 367

Query: 357 AYIFWRLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            Y  ++++  G    +     + K+ + +  E +      +            ++     
Sbjct: 368 EYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKK---IAEKLKIKVEAYHEL 424

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               N I +E   +     +  +I D+P               +P    Q G        
Sbjct: 425 GHLINEIFEE--TVEHQLIQPTFITDYP------------AVVSPLARRQDGNPEFTD-- 468

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  +++      E+A+G    + +E   + F     +     +          RA 
Sbjct: 469 -------RFEFFIGAREVANGFSELNDAEDQAERFRKQVEAAASGDDEAMPYDKDYIRAL 521

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP  G   GIDR+VM L  ++++R+V LFP  +
Sbjct: 522 EYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFPHMK 558


>gi|325922146|ref|ZP_08183936.1| lysyl-tRNA synthetase (class II) [Xanthomonas gardneri ATCC 19865]
 gi|325547381|gb|EGD18445.1| lysyl-tRNA synthetase (class II) [Xanthomonas gardneri ATCC 19865]
          Length = 505

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 69/331 (20%), Positives = 126/331 (38%), Gaps = 22/331 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  VR++G +   R  G   F  I+D  G  Q+    +           + +     G +
Sbjct: 67  GRTVRMAGRLMAKRVMGKASFAQIQDESGRVQLFLQGNVLG-----DAYTAFKGWDVGDI 121

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RD 136
           ++           TG++ + A  + +L+ +   PLP           R++ R++DL    
Sbjct: 122 VAVEGGL--TRTKTGELSVKATALRLLTKSLR-PLPDKWHGLSDVEQRYRQRYVDLIVTP 178

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALP 195
              +  +KR++II +MR  + A  F+E  TP++        A+ F           Y L 
Sbjct: 179 EAREVFIKRSKIIRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLY-LR 237

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G +R ++I   FR+E   +   P EF  L++  ++    +I++  E 
Sbjct: 238 VAPELYLKRLVVGGLERVYEINRNFRNEGVSTRHNP-EFTMLELYEAYATYHEIMDLTEQ 296

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           V+R   +       V+ +   I    A RR+  D+           V  H         +
Sbjct: 297 VIRDTAQSVLGTTQVNWDGADIDLAPAFRRWRMDEA----------VRHHNPDISAADCT 346

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
              ++    E   I  K   G       + E
Sbjct: 347 DRAALLGHCERLKIKVKPSYGWGKLLLEIFE 377



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
           + +D       +++L  NG E+A+G    +  E     F     +K+       +     
Sbjct: 402 RSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMHYDADY 461

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 462 IRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|227498560|ref|ZP_03928704.1| lysyl-tRNA synthetase class II [Acidaminococcus sp. D21]
 gi|226904016|gb|EEH89934.1| lysyl-tRNA synthetase class II [Acidaminococcus sp. D21]
          Length = 657

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 72/312 (23%), Positives = 140/312 (44%), Gaps = 27/312 (8%)

Query: 2   HRYR-THSCGDLG-----VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           H Y+ TH   ++      + + G+ VR++G +  +R HG   F+D+ D  G  Q+    D
Sbjct: 43  HAYKVTHHNKEVHDKVKELEEKGAEVRVAGRLTAIRGHGKTAFMDLLDKSGKIQLYVRKD 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               +    V+    L   G ++    E    ++  G+  +  +K+E LS A + PLP  
Sbjct: 103 ELGEDNYSVVK----LLDIGDIVGVEGEVFTTHM--GEPSIRVKKLEFLSKALK-PLPEK 155

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASS 173
                 + IR++ R++DL  +   ++  VKRT II S+R  +  E ++E  TP+L T S 
Sbjct: 156 WHGLKDKEIRYRQRYVDLIVNPEVRDTFVKRTEIIKSIRNILDNEGYLEVETPVLNTISG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A +   + L+  G +R ++I   FR+E       P E
Sbjct: 216 GATARPFVTHHNALDIDLY-LRIATELNLKRLIVGGLERVYEIGRIFRNEGMDIKHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  +++  ++ +   +++  E ++    +       ++           + R+   +A++
Sbjct: 274 FTSIELYEAYGDYQTMMDITEKLVSETAQRVLGTMKITYQGKEIDLTPPWPRMTMVEAVK 333

Query: 285 RY-GTDKPDLRN 295
           ++ G D   +R+
Sbjct: 334 KFSGYDFTGVRD 345



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 8/117 (6%)

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
              +P  +      SL   ++      +++   NG EI +G    +      + F     
Sbjct: 388 IMGHPKEISPLAKSSLADPEV----TDRFEGFINGSEICNGFTELNDPIDQKERFEKQVE 443

Query: 514 SKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +   ++  G        A   G+PP GG+  GIDR+VMLL  + ++R+V LFP  +
Sbjct: 444 ERNNGDDEAGMMDEDFINALMHGLPPTGGLGIGIDRLVMLLTNSASIRDVLLFPTMK 500


>gi|56418609|ref|YP_145927.1| lysyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|261417575|ref|YP_003251257.1| lysyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|297528449|ref|YP_003669724.1| lysyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|319765233|ref|YP_004130734.1| lysyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|56378451|dbj|BAD74359.1| lysyl-tRNA synthetase (lysine--tRNA ligase) [Geobacillus
           kaustophilus HTA426]
 gi|261374032|gb|ACX76775.1| lysyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|297251701|gb|ADI25147.1| lysyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|317110099|gb|ADU92591.1| lysyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 494

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 69/330 (20%), Positives = 125/330 (37%), Gaps = 32/330 (9%)

Query: 5   RTHSC-------GDLGVSDVGS---FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH         GDL   ++      V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 34  RTHKAQELFELYGDLSKEELEEKQIEVAVAGRIMTKRGKGKAGFAHIQDVTGQIQIYVRQ 93

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    +  +  +   +  I G+               G++ +     E L+ A   PLP 
Sbjct: 94  DDVGEQQYELFKISDLGDIVGV------RGTMFKTKVGELSIKVSSYEFLTKALR-PLPE 146

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +   K   + R+ II SMR  + +  ++E  TP++ A +
Sbjct: 147 KYHGLKDIEQRYRQRYLDLIMNPESKKTFITRSLIIQSMRRYLDSRGYLEVETPMMHAVA 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+        + Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 207 GGAAARPFITHHNALDMTLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP- 264

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  L++  ++ +  DI+   EN++  +  E      +            + R+   DAI
Sbjct: 265 EFTMLELYEAYADFRDIMELTENLIAHIATEVLGTTKIQYGEHVVDLTPEWRRLHMVDAI 324

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           + Y     D    +      E        V
Sbjct: 325 KEY--VGVDFWRQMSDEEARELAKEHGVEV 352



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 6/154 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E G+       F  I++  F+E  + E  +      +  P       K N     
Sbjct: 342 RELAKEHGVEVAPHMTFGHIVN-EFFEQ-KVESHLIQPTFIYGHPVEISPLAKKNPDDPR 399

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
              +++L   G E A+     +      Q F      +E               A + GM
Sbjct: 400 FTDRFELFIVGREHANAFTELNDPIDQRQRFEAQLKEREQGNDEAHEMDEDFLEALEYGM 459

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  G+DR+VMLL  + ++R+V LFP  ++
Sbjct: 460 PPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMRH 493


>gi|312863664|ref|ZP_07723902.1| lysine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322517081|ref|ZP_08069966.1| lysine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|311101200|gb|EFQ59405.1| lysine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322124341|gb|EFX95849.1| lysine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 496

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 67/340 (19%), Positives = 126/340 (37%), Gaps = 30/340 (8%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             ++     ++G +   R  G + F  I+D  G  Q+    
Sbjct: 37  RTATSGQLKEKYADKTKEELHEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  + A+ F+E  TP+L   +
Sbjct: 150 KFHGLSDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYLDAQGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  +++  ++ +  DI+N  E +++   +       ++           F RI   DAI+
Sbjct: 269 FTSIEVYQAYADFHDIMNLTEGIIQHAAKVVKGDGPINYQGTEIKINEPFKRIHMVDAIK 328

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
                  D    + +             V      V    
Sbjct: 329 E--ITGVDFWQDMTLDEAKAIAAEKNVPVEKHYTEVGHII 366



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K N        +++L     E  +     +     L  F     +KE+ ++   G     
Sbjct: 396 KKNPEDPRFTDRFELFIMTKEYGNAFTELNDPIDQLSRFEAQAAAKELGDDEATGIDYDY 455

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 456 VEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|118475508|ref|YP_892300.1| lysyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|118414734|gb|ABK83154.1| lysyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 504

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 102/576 (17%), Positives = 185/576 (32%), Gaps = 128/576 (22%)

Query: 1   MHRYRTH--SCGDLG--VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           +  ++T      DL          V +SG +   R  G   F ++ D     Q+  +  S
Sbjct: 36  ISEFKTKFAYIKDLNGDEKKADEEVTISGRLKLKRVAGKSTFANMEDENDNIQIYYSLGS 95

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E     +    L +  +V+            TG+  + A KI + S A   PLP   
Sbjct: 96  IGEEDYTKFKKN--LEVGDIVLVTG---YAFVTKTGEFSIHASKIVLASKAIS-PLPEKF 149

Query: 117 EREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                  +R++ R+LD+  D  +  + VKR+ II+++R     + F+E  TP++   +  
Sbjct: 150 HGLTDIEMRYRQRYLDMIMDKDVRADFVKRSLIISTIRRFFEDKGFLEVETPMMHPIAGG 209

Query: 176 G-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             A+ F+          Y L  AP+ Y + L+  G +  F++  CFR+E           
Sbjct: 210 ANAKPFITHHNALDVDRY-LKIAPELYLKRLIVGGMEAVFEMNRCFRNEG---------- 258

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
                          ++   N                  F  I +  A   Y        
Sbjct: 259 ---------------MDLTHN----------------PEFTSIEFYWAWHNY-------- 279

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354
                 ++TE          +    +    +              + D + E        
Sbjct: 280 --FEAMDLTEELFAVLLDRLNLPQVIEFDGKSIDFSKPFARV--KYIDAIVE-------- 327

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
                            +G +++ + + N + I  +L         F A D L       
Sbjct: 328 -----------------IGGISRDI-VTNKDKILSKLKADK-----FEANDKL----DLG 360

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +  +      +        +I+DFP             + +P +           +D 
Sbjct: 361 HLQAELFD--NYVEDKLINPTFIVDFP------------ISISPLSRR---------SDA 397

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS----NVGISKEVVENRFGGLYRAFQ 530
               A +++L   G E+A+     +      + F           +          +A  
Sbjct: 398 DKNVAERFELFIAGRELANAFNELNDPVDQYERFKSQIEAKNAGDDEAHEMDEDYCQALG 457

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GM P  G   G+DR+VMLLL  K++R+V LFP  +
Sbjct: 458 YGMSPTVGWGLGVDRLVMLLLNKKSIRDVILFPAMK 493


>gi|301057954|ref|ZP_07199011.1| lysine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300447921|gb|EFK11629.1| lysine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 493

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 69/328 (21%), Positives = 128/328 (39%), Gaps = 22/328 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R++G +   R  G   F+ I+D  G  Q     +       ++ +   +    G+     
Sbjct: 59  RVAGRIVSKRDFGKASFIHIKDRSGRIQAYVRKNKVKEGQFETFKLMDIGDFVGI----- 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
                    TG++ L A+ + +LS +   PLP           R++ R++DL  +  +  
Sbjct: 114 -RGPLFRTKTGELTLLAEDMVLLSKS-MRPLPEKWHGLTDVETRYRQRYVDLIMNDPVRD 171

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             V R+RII ++R   I+ +F+E  TP++        AR F+          Y L  AP+
Sbjct: 172 VFVTRSRIIQAIRQFFISRDFLEVETPMMQPIPGGATARPFITHHNALDMDLY-LRVAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F+I   FR+E       P EF  ++  M++   +D++   E V   
Sbjct: 231 LYLKRLVVGGFERVFEINRNFRNEGLSIKHNP-EFTMMEFYMAYATYEDLMVLTEEVFGY 289

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           + ++ + G  +     RI +               N I + +        E  +F     
Sbjct: 290 LLDQVAGGQVIEYQGKRIDFTPPW-----------NRIPLFDSLRETGEIEENIFEGREP 338

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
                   AIP +   G+     ++ + 
Sbjct: 339 AAALARSLAIPVQERDGHGQILTKLFDH 366



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 4/102 (3%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYR 527
           ND       +++L   G EIA+     +        F +    ++  +            
Sbjct: 392 NDRDPTLTDRFELFIGGREIANAFTELNDPVDQKARFESQVALRDAGDKEALFMDEDYVT 451

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           A + GMPP  G   GIDR+VMLL  + ++R+V LFP  +   
Sbjct: 452 ALEYGMPPTAGEGIGIDRVVMLLTDSPSIRDVILFPQMRARE 493


>gi|328956582|ref|YP_004373968.1| lysine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328672906|gb|AEB28952.1| lysine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 499

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 70/362 (19%), Positives = 139/362 (38%), Gaps = 23/362 (6%)

Query: 5   RTHSCGDLGVSD--------VGSFVR--LSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   +L  +          G      ++G +   R  G + F  ++D  G  Q+    
Sbjct: 39  RTHLSNELHEAYDEFTKEEIAGKEETATVAGRIMTKRGKGKVGFAHLQDRKGQIQIYVRK 98

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  ++ ++  +    G+              TG++ +    I  LS A   PLP 
Sbjct: 99  DTVGEEDYETFKNADLGDFIGV------TGTIMKTDTGEVTIKPTSITQLSKALR-PLPD 151

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +    +   KR++II  +R  +  ++++E  TP L   +
Sbjct: 152 KYHGLTNVEQRYRQRYLDLISNRESFDRFTKRSQIIREVRNYLNEQDYLEVETPTLHNLA 211

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 212 GGAAARPFITHHNALDMELY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGVDTTHNP- 269

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D+++ +E ++R V +       ++ N   I  + + +R      D
Sbjct: 270 EFTMLEAYTAYTDFEDVMDLVEGLIRTVAQRVLGTGQITYNGQAIDLESSWKR--QHMVD 327

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
                   +  +H  + E R  +K   V                 +   D++ +     G
Sbjct: 328 AIKEHSGVDFWQHMTNEEARALAKEHDVPVTEHSQFGHVVNEFFEKFVEDKLIQPTFIYG 387

Query: 353 QP 354
            P
Sbjct: 388 HP 389



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 65/157 (41%), Gaps = 12/157 (7%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDL 474
             +A+E  +      +F  +++  F+E   E+K I       +P  +    +      D 
Sbjct: 347 RALAKEHDVPVTEHSQFGHVVN-EFFEKFVEDKLIQPTFIYGHPLEISP--LAKKNTEDP 403

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++    G E  +     +      + F +    + +  +           + +
Sbjct: 404 R--FTDRFEAFIVGHEYGNAFSELNDPIDQRERFESQMKERALGNDEAHMIDEDFIESLE 461

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            GMPP GG+  GIDR+VMLL  A+++R+V LFP  +N
Sbjct: 462 YGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMRN 498


>gi|229159250|ref|ZP_04287275.1| Lysyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228624265|gb|EEK81066.1| Lysyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 499

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 59/316 (18%), Positives = 124/316 (39%), Gaps = 21/316 (6%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G+    ++      V ++G +   R  G   F  I+D +G  Q+    D+   E  +  +
Sbjct: 49  GEFSKEELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +    G ++    +    N+  G++ + A    +L+ +   PLP           R+
Sbjct: 109 TADL----GDLVGIEGKVFKTNV--GELSVKATGFTLLTKSLR-PLPDKYHGLKDVEQRY 161

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F+   
Sbjct: 162 RQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ 
Sbjct: 222 NALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYA 279

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPI 297
           +  DI+   EN++  + ++     T+      I  +    R             D   P+
Sbjct: 280 DYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWTRLHMVDAIKEHSGADFWKPM 339

Query: 298 IMHNVTEHFVHSEFRV 313
            +    E        +
Sbjct: 340 SVEEARELAKEHNVDI 355



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   +  E   I++  F+E   E+K I      +  P       K ND    
Sbjct: 345 RELAKEHNVDIKDTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDEDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|270290208|ref|ZP_06196434.1| lysyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304385523|ref|ZP_07367867.1| lysine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|270281745|gb|EFA27577.1| lysyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304328027|gb|EFL95249.1| lysine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 498

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 76/385 (19%), Positives = 144/385 (37%), Gaps = 50/385 (12%)

Query: 2   HRY-RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH    L             + G    ++G +   R  G + F D++D  G  Q+
Sbjct: 33  HRFERTHLAAQLHEKYGDMSKEEIEEQGVVATVAGRMVSKRGKGKVGFADLKDRSGKIQL 92

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    ++ K  +   +    G  +  + + +  ++  G++ +    +  LS A   
Sbjct: 93  YVRKDELGEDVYKIFKRADL----GDFLGVTGDVMKTDM--GELTIKVTSLTFLSKALR- 145

Query: 111 PLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP            ++ R+LDL   D   +   KRT+I++++R  +    F E  TP+L
Sbjct: 146 PLPDKFHGLQNVEQIYRQRYLDLIANDESMERFRKRTKIVSAIRRYLDDHGFAEVETPVL 205

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T +    AR F+          Y L  A + + + L+  G +R ++I   FR+E   + 
Sbjct: 206 HTQAGGASARPFITHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTR 264

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICY 279
             P EF  L+  +++ +  D+++  E +L+      S+   ++           F R+  
Sbjct: 265 HNP-EFTMLETYVAYYDFHDVMDETEGILKAAVNAVSDDGKITYQGTELDLNQDFERLHM 323

Query: 280 DDAIRRYGTDKPDLRNPIIM-------------------HNVTEHFVHSEFRVFSKILSV 320
            DAI++Y          +                     H + E F         + + +
Sbjct: 324 VDAIKKYAGVDFWPEMSVEEARKLADEHGVKYESWWTVGHIINEFFEDKVQDQLKQPVFI 383

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMN 345
                  +  AK    +  F DR  
Sbjct: 384 YGHPVEISPLAKKNADDPRFTDRFE 408



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 6/153 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A E G+   + +    I++  F+E ++ + ++      +  P       K N     
Sbjct: 345 RKLADEHGVKYESWWTVGHIIN-EFFE-DKVQDQLKQPVFIYGHPVEISPLAKKNADDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGM 533
              +++L   G E  +     +      Q F      +E       G       A + GM
Sbjct: 403 FTDRFELYILGNEYGNAFTELNDPIDQRQRFEAQVAEREAGNEEAEGIDEDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG+  GIDR+VMLL  A ++R+V LFP  +
Sbjct: 463 PPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTMR 495


>gi|186476208|ref|YP_001857678.1| lysyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|238691313|sp|B2JIY1|SYK_BURP8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|184192667|gb|ACC70632.1| lysyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 512

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 68/308 (22%), Positives = 123/308 (39%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL      +           V L+G +   R  G   F  +RD  G  Q    P 
Sbjct: 47  THHAADLQTEYADADKDALETKALHVALAGRMMLKRVMGKASFATVRDGSGQIQFFITPA 106

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                  ++ +   +  I       +A+ +      G++ +   ++ +LS A   PLP  
Sbjct: 107 DVGEATYEAFKKWDLGDI------VAAKGVLFRTNKGELSVRCTELRLLSKALR-PLPDK 159

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + +R++ R++DL   D   K  V RT+ ++S+R  M   +F+E  TP+L     
Sbjct: 160 FHGLADQEMRYRQRYVDLIVTDEARKTFVARTKAVSSIRKFMAEADFMEVETPMLHPIPG 219

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 220 GAAAKPFVTHHNALDMQMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPE 277

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +      ++           F R+    AI+
Sbjct: 278 FTMMEFYAAYTDYKWLMDFTEQLIRQAAVDALGNAAITYQGRELDLSKPFHRLTITQAIQ 337

Query: 285 RYGTDKPD 292
           +Y     D
Sbjct: 338 KYAPQYSD 345



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 61/163 (37%), Gaps = 27/163 (16%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
            P    +     +  + +E        +E  +I+D+P                       
Sbjct: 367 QPAFLNAGIGALQLALFEE--TAESQLWEPTFIIDYPI---------------------E 403

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF-- 522
                + +D +     +++L   G EIA+G    +  E     F      K+  +     
Sbjct: 404 VSPLARASDSVDGITERFELFITGREIANGFSELNDPEDQAARFKKQVDQKDAGDEEAMY 463

Query: 523 --GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 RA + GMPP GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 464 YDADYIRALEYGMPPAGGCGIGIDRLVMLLTDSPSIRDVILFP 506


>gi|289663373|ref|ZP_06484954.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289668829|ref|ZP_06489904.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 505

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 25/302 (8%)

Query: 5   RTHSCGDLGVSDV-------------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL                  G  V+++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPEALEASGGTVKMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              +    +   + +   V  I       + E       TG++ + A  + +L+ +   P
Sbjct: 101 LQGNVLG-DAYTAFKGWDVGDI------VAVEGWLTRTKTGELSVKASALRLLTKSLR-P 152

Query: 112 LPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP           R++ R++DL       +  +KR++II +MR  + A  F+E  TP++ 
Sbjct: 153 LPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPMMH 212

Query: 171 -ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   +  
Sbjct: 213 YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRH 271

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  L++  ++    +I++  E V+R   +       VS +   I    A RR+  D
Sbjct: 272 NP-EFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFRRWRMD 330

Query: 290 KP 291
           + 
Sbjct: 331 EA 332



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           + +D       +++L  NG E+A+G    +  E     F     +K+  ++         
Sbjct: 402 RSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMHFDADY 461

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 462 IRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|320353044|ref|YP_004194383.1| lysyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320121546|gb|ADW17092.1| lysyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 495

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 63/287 (21%), Positives = 119/287 (41%), Gaps = 20/287 (6%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D G   R++G V  +R  G   F  ++D     Q+ A  D    E+    +   V  I G
Sbjct: 53  DSGHSYRVAGRVMSMRKFGKAAFFHLQDASERLQIYARRDLLGEEVYDLFKKWDVGDIVG 112

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +      E       TG++ L A  +++++ +   PLP           R++ R+LDL  
Sbjct: 113 V------EGRLFKTKTGELSLEATTLQMITKSLR-PLPEKFHGLTDVETRYRQRYLDLIV 165

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           +   + + K R  II  +R  +    ++E  TP++        A+ F           Y 
Sbjct: 166 NPEAREVFKKRVEIIRLIREFLNNRGYMEVETPMMQPVPGGATAKPFRTHHNALDMDLY- 224

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  L+   ++    D+++  
Sbjct: 225 LRIAPELYLKRLLVGGFEKVFEINRNFRNEGLSTRHNP-EFTMLEFYQAYATYHDLMDLT 283

Query: 254 ENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKP 291
           E ++  +  E +    +S           + R+  ++++ + G   P
Sbjct: 284 EEMVSWLAHEVTGSMDISYQGTPVNLAPPWRRLTMEESLVQIGGLDP 330



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 7/130 (5%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
            +E   EE+ ID      T     +  L + N+       +++L   G EIA+     + 
Sbjct: 363 LFELLVEERLIDPTF--ITSYPTEVSPLARRNEEDPTVTDRFELFITGREIANAFSELND 420

Query: 501 SEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
               LQ F      +   E           RA + GMP   G   GIDR+VMLL  + ++
Sbjct: 421 PIDQLQRFQKQIDERGEDEEIHPVLDRDYVRALEYGMPSAAGEGIGIDRLVMLLTDSPSI 480

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 481 RDVILFPQMK 490


>gi|229131084|ref|ZP_04259997.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228652421|gb|EEL08345.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 499

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 60/312 (19%), Positives = 124/312 (39%), Gaps = 20/312 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   ++   V ++G +   R  G   F  I+D +G  Q+    D+   E  +   +  +
Sbjct: 55  ELEEKEI--TVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDTVGDEEYELFTTADL 112

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               G ++    +    N+  G++ + A    +L+ +   PLP           R++ R+
Sbjct: 113 ----GDLVGIEGKVFKTNV--GELSVKAIGFTLLTKSLR-PLPDKYHGLKDVEQRYRQRY 165

Query: 131 LDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQ 188
           LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F        
Sbjct: 166 LDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFTTHHNALD 225

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + +D
Sbjct: 226 MELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYND 283

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPIIMHN 301
           I+   EN++  + ++     T+      I  +    R             D  NP+ +  
Sbjct: 284 IMKLTENMVAHIAKKVLGTTTIQYGDYEINLEPEWTRLHMVDAIKQHSGADFWNPMSVEE 343

Query: 302 VTEHFVHSEFRV 313
             E        +
Sbjct: 344 ARELAKEHNVEI 355



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   N  E   I++  F+E   E+K I      +  P       K ND    
Sbjct: 345 RELAKEHNVEIKNTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDEDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|146328872|ref|YP_001209830.1| lysyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|229559857|sp|A5EY50|SYK_DICNV RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|146232342|gb|ABQ13320.1| lysyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 498

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 68/302 (22%), Positives = 131/302 (43%), Gaps = 31/302 (10%)

Query: 6   THSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANP 54
           TH    L           +S  G  V ++G +   R  G   F+ ++D  G   Q+  + 
Sbjct: 39  THKAAQLHRDFDHGDEAALSQAG-TVAIAGRMMGKRVMGKASFVHVQDGSGEQIQLYVSS 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E+ +  ++  V    G ++  S         TG++ +    I +L+ +   PLP 
Sbjct: 98  DALTEEVYEEFKTWDV----GDIIFASGSLFRTK--TGELTVQTNAIRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + IR++ R++DL  +   +++ K R++II+ +R    A +F+E  TP++    
Sbjct: 151 KFHGLTDQEIRYRQRYVDLMVNAQSRDVFKARSKIISYIRHFFEARDFLEVETPMMHPIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFITHHNALDMPLY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSARHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN--------NFLRICYDDAIR 284
           EF  L+   ++ + +D+++  E + +G+ +                   F R+   DA+ 
Sbjct: 269 EFTMLEFYQAYADYNDLMDLSEVLFQGLAQTILGTTKFDYQGTEIDFSQFRRLPMRDAVC 328

Query: 285 RY 286
           +Y
Sbjct: 329 QY 330



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 4/99 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN----VGISKEVVENRFGGLYR 527
           ND       +++L   G EIA+G    + +E   + F           E   +  G   R
Sbjct: 398 NDENPDITDRFELFIGGREIANGFSELNDAEDQAERFKEQAAAFEAGDEEAMHYDGDFVR 457

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + G+PP  G   GIDR+VMLL  A ++R+V LFP  +
Sbjct: 458 ALEYGLPPTAGQGIGIDRLVMLLTNAPSIRDVLLFPHMR 496


>gi|116627566|ref|YP_820185.1| lysyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|122267836|sp|Q03LD3|SYK_STRTD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116100843|gb|ABJ65989.1| Lysyl-tRNA synthetase (class II) [Streptococcus thermophilus LMD-9]
          Length = 496

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 67/354 (18%), Positives = 132/354 (37%), Gaps = 27/354 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             ++     ++G +   R  G + F  I+D  G  Q+    
Sbjct: 37  RTATSGQLKEKYADKTKEELHEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  + A+ F+E  TP+L   +
Sbjct: 150 KFHGLSDIETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYLDAQGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAAKPFITHHNAQNIDMVLRIALELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E +++   +       V+     I  ++  +R        
Sbjct: 269 FTMIEVYQAYADFHDIMDLTEGIIQHAAKAVKGDGPVNYQGTEIKINEPFKRIHMVDA-- 326

Query: 294 RNPIIMHNVTEHFVHSEFRVFSK-ILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                +  +T      +        L+      V     + G    AF +   E
Sbjct: 327 -----IKEITGVDFWQDMTFEEAVALANEKHVPVEKHYTEVGQIINAFFEEFVE 375



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 54/134 (40%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      +  P       K N        +++L     E  +   
Sbjct: 365 IINAFFEEFVEET--LTQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAYS 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 423 ELNDPIDQLSRFEAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTD 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 TTTIRDVLLFPTMK 496


>gi|270157122|ref|ZP_06185779.1| lysyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289164473|ref|YP_003454611.1| lysyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269989147|gb|EEZ95401.1| lysyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288857646|emb|CBJ11486.1| putative lysyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 497

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 69/309 (22%), Positives = 130/309 (42%), Gaps = 31/309 (10%)

Query: 2   HRYRTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           H  R H   +L           +++    V ++G +   R  G   F  I+D  G  Q+ 
Sbjct: 35  HFRREHLAQELIKEYDSLDKETLAEKHIKVTVAGRIVLRRIMGKASFFHIQDFSGRIQIY 94

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              +    E  +  +   +    G ++    E    N  TG++ ++A+ IE+L+ +   P
Sbjct: 95  IRANDLP-EQYEQFKHWDL----GDIVGVEGELFKTN--TGELTVNAEGIELLTKSLR-P 146

Query: 112 LPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP        + +R++ R++DL   D      + R+R+I ++R  M    F+E  TP++ 
Sbjct: 147 LPDKFHGLADQEMRYRKRYVDLIANDESRLTFLIRSRLIQALRQFMDKSFFLEVETPMMH 206

Query: 171 ASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  AR F+        + Y L  AP+ Y + L+  GF+R ++I   FR+E   +  
Sbjct: 207 PIPGGALARPFVTHHHTLDMTMY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGISTRH 265

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYD 280
            P EF  ++   ++ +  D++N  E ++R + +       V            F R+   
Sbjct: 266 NP-EFTMVEFYQAYADYKDLMNFTEEMIRYLCDSVLERRQVEYQGQILDFDKPFTRMTVK 324

Query: 281 DAIRRYGTD 289
           +AI  Y  +
Sbjct: 325 EAILHYHPE 333



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 7/127 (5%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
            +E   E +         T     +  L + +D       +++    G EIA+G    + 
Sbjct: 369 LFEETVEHQLFQPTF--ITGYPTEISPLARRSDQDPELTDRFEFFIAGREIANGFSELND 426

Query: 501 SEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           +E   + F      K+  +            A + G+PP  G   GIDR+VML   ++++
Sbjct: 427 AEDQAERFRKQVAEKDAGDMEAMHFDSDYIEALEYGLPPTAGEGIGIDRLVMLFTNSQSI 486

Query: 557 REVSLFP 563
           R+V LFP
Sbjct: 487 RDVILFP 493


>gi|194365604|ref|YP_002028214.1| lysyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194348408|gb|ACF51531.1| lysyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 503

 Score =  206 bits (523), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 62/276 (22%), Positives = 116/276 (42%), Gaps = 12/276 (4%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+++G +   R  G   F  I+D  G  Q+                + +     G +
Sbjct: 65  GRQVKMAGRLMAKRIMGKASFAQIQDESGRIQLFLQGTVLG-----DAYTAFKGWDVGDI 119

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RD 136
           ++           TG++ + A+ I +L+ +   PLP           R++ R++DL    
Sbjct: 120 IAVEGGL--TRTKTGELSVKAESIRLLTKSLR-PLPDKWHGLADVEQRYRQRYVDLIVTP 176

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALP 195
                 +KR++II +MR  +   +F+E  TP++        A+ F           Y L 
Sbjct: 177 ESRAVFIKRSKIIRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDLY-LR 235

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L   G +R ++I   FR+E   +   P EF  +++  ++   ++I++  E 
Sbjct: 236 VAPELYLKRLTVGGLERVYEINRNFRNEGVSTRHNP-EFTMMELYEAYATYNEIMDLTEG 294

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           V+R V    + G  V  +  +I    A RR+  D+ 
Sbjct: 295 VIRDVATTVNGGTEVEWDGAKIDLGPAFRRWRMDEA 330



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGL 525
           + ND       +++L  NG E+A+G    +  E   Q F     +K    +   +     
Sbjct: 400 RANDNDPGYTDRFELFVNGKELANGFSELNDPEDQAQRFQAQVAAKEGGDDEAMHYDADY 459

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  G+DR+VMLL G+ ++R+V LFP
Sbjct: 460 IRALEYGMAPTGGLGIGVDRLVMLLTGSSSIRDVLLFP 497


>gi|254220959|pdb|3E9H|A Chain A, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysylsulfamoyl Adenosine
 gi|254220960|pdb|3E9H|B Chain B, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysylsulfamoyl Adenosine
 gi|254220961|pdb|3E9H|C Chain C, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysylsulfamoyl Adenosine
 gi|254220962|pdb|3E9H|D Chain D, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysylsulfamoyl Adenosine
 gi|254220963|pdb|3E9I|A Chain A, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysine Hydroxamate-Amp
 gi|254220964|pdb|3E9I|B Chain B, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysine Hydroxamate-Amp
 gi|254220965|pdb|3E9I|C Chain C, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysine Hydroxamate-Amp
 gi|254220966|pdb|3E9I|D Chain D, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysine Hydroxamate-Amp
 gi|307568117|pdb|3A74|A Chain A, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With Diadenosine Tetraphosphate (Ap4a)
 gi|307568118|pdb|3A74|B Chain B, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With Diadenosine Tetraphosphate (Ap4a)
 gi|307568119|pdb|3A74|C Chain C, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With Diadenosine Tetraphosphate (Ap4a)
 gi|307568120|pdb|3A74|D Chain D, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With Diadenosine Tetraphosphate (Ap4a)
          Length = 493

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 69/330 (20%), Positives = 125/330 (37%), Gaps = 32/330 (9%)

Query: 5   RTHSC-------GDLGVSDVGS---FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH         GDL   ++      V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 33  RTHKAEELFELYGDLSKEELEEQQIEVAVAGRIMTKRGMGKAGFAHIQDVTGQIQIYVRQ 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    +  +  +   +  I G+               G++ +     E L+ A   PLP 
Sbjct: 93  DDVGEQQYELFKISDLGDIVGV------RGTMFKTKVGELSIKVSSYEFLTKALR-PLPE 145

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +   K   + R+ II SMR  + +  ++E  TP++ A +
Sbjct: 146 KYHGLKDIEQRYRQRYLDLIMNPESKKTFITRSLIIQSMRRYLDSHGYLEVETPMMHAVA 205

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+        + Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 206 GGAAARPFITHHNALDMTLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP- 263

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  L++  ++ +  DI+   EN++  +  E      +            + R+   DAI
Sbjct: 264 EFTMLELYEAYADFRDIMKLTENLIAHIATEVLGTTKIQYGEHLVDLTPEWRRLHMVDAI 323

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           + Y     D    +      E        V
Sbjct: 324 KEY--VGVDFWRQMSDEEARELAKEHGVEV 351



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 6/154 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E G+       F  I++  F+E   E+K I          +    + K  D    
Sbjct: 341 RELAKEHGVEVAPHMTFGHIVN-EFFEQKVEDKLIQPTFIYGHPVEISPLAKKNPD-DPR 398

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
              +++L   G E A+     +      Q F      +E               A + GM
Sbjct: 399 FTDRFELFIVGREHANAFTELNDPIDQRQRFEEQLKEREQGNDEAHEMDEDFLEALEYGM 458

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  G+DR+VMLL  + ++R+V LFP  ++
Sbjct: 459 PPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMRH 492


>gi|55822661|ref|YP_141102.1| lysyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|55738646|gb|AAV62287.1| lysyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 511

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 67/340 (19%), Positives = 126/340 (37%), Gaps = 30/340 (8%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             ++     ++G +   R  G + F  I+D  G  Q+    
Sbjct: 52  RTATSGQLKEKYADKTKEELHEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRK 111

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 112 DAVGEENYEIFKKADL----GDFLGVEGEIMRTDM--GELSIKATHITHLSKALR-PLPE 164

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  + A+ F+E  TP+L   +
Sbjct: 165 KFHGLSDIETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYLDAQGFLEVETPVLHNEA 224

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 225 GGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRVFRNEGMDATHNP-E 283

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  +++  ++ +  DI+N  E +++   +       ++           F RI   DAI+
Sbjct: 284 FTTIEVYQAYADFHDIMNLTEGIIQHAAKAVKGDGPINYQGTEIKINEPFKRIHMVDAIK 343

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
                  D    + +             V      V    
Sbjct: 344 E--ITGVDFWQDMTLEEAKAVAAEKNVPVEKHYTEVGHII 381



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K N        +++L     E  +     +     L  F     +KE+ ++   G     
Sbjct: 411 KKNPEDPRFTDRFELFIMTKEYGNAFTELNDPIDQLSRFEAQAAAKELGDDEATGIDYDY 470

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 471 VEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 511


>gi|94309979|ref|YP_583189.1| lysyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|123081366|sp|Q1LPK6|SYK_RALME RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|93353831|gb|ABF07920.1| lysine tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 515

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 67/308 (21%), Positives = 124/308 (40%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVS--DVGS--------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH  G L     +            V ++G +   R  G   F  ++D  G  Q     D
Sbjct: 49  THQAGALHAQYGETDQATLEASPVEVSIAGRMMLKRVMGKASFATVQDGSGQIQFYITRD 108

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               ++  + +   +    G ++S   E    N   G++ +  +++ +LS A   PLP  
Sbjct: 109 KVGEDVYAAFKHWDL----GDIISARGELFRTN--KGELSVQVRELRLLSKALR-PLPDK 161

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 +  +++ R++DL            RT+ I+S+R  M    F+E  TP+L     
Sbjct: 162 FHGLADQETKYRQRYVDLIVSPETRSTFRARTQAISSIRRHMADAGFMEVETPMLHPIPG 221

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + +  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 222 GAAAKPFITHHNALDMQMF-MRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 279

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  EN++R    +     TV+           F R+    AI+
Sbjct: 280 FTMMEFYAAYTDYRWLMDFTENLIRQAAIDARGSATVTYQGRELDLSKPFHRLTICGAIQ 339

Query: 285 RYGTDKPD 292
           +Y  +  D
Sbjct: 340 KYAPEYTD 347



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 55/306 (17%), Positives = 98/306 (32%), Gaps = 40/306 (13%)

Query: 275 LRICYDDA--IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
             I + +A  ++ +    P+L    ++    E          ++ +S     E   +   
Sbjct: 227 PFITHHNALDMQMFMRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFY 286

Query: 333 GGG-GNRAFCDRMNEWARSQG--QPGLAYIFWRLDESGNVAGM------GPVAKHLNIVN 383
                 R   D      R       G A + ++  E             G + K+     
Sbjct: 287 AAYTDYRWLMDFTENLIRQAAIDARGSATVTYQGRELDLSKPFHRLTICGAIQKYAPEYT 346

Query: 384 TEAIRVR--LDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFP 441
              +     L  +  +        P    +     +  + +E        +E  +I+D+P
Sbjct: 347 DAQLADADFLRAELKNKFKINTSAPQFLNAGLGTLQLVLFEE--TAEAQLWEPTYIVDYP 404

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
                                       +G+D       +++L   G EIA+G    +  
Sbjct: 405 ---------------------VEVSPLARGSDTQPGITERFELFITGREIANGFSELNDP 443

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   + F      K+  +           RA + GMPP GG   GIDR+VMLL  + N+R
Sbjct: 444 EDQAERFRKQVEQKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIR 503

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 504 DVILFP 509


>gi|219852705|ref|YP_002467137.1| lysyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219546964|gb|ACL17414.1| lysyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 511

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 64/288 (22%), Positives = 124/288 (43%), Gaps = 19/288 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
            D+G       V+++G ++ +R HG  +F D+ D  G  Q+    +    E       + 
Sbjct: 46  ADIGHEKSEESVKIAGRIYTIRNHGKTVFADLGDEQGRIQLYIRKNDVGEEQFSLFTEQ- 104

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
                G ++  S       +  G+I L   ++ +L+ +   PLP           R++ R
Sbjct: 105 --IDRGDIIGVSGHLFRTKL--GEITLWVDQLTLLTKSL-CPLPEKFHGLKDTETRYRQR 159

Query: 130 FLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL  +   +   + R+RII+ +R  +    F+E  TP L        AR F       
Sbjct: 160 YVDLIMNEKARETFRVRSRIISLIRQFLGERGFLEFETPTLQPVYGGANARPFTTYHNFL 219

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
             +F+ L  A + Y + L+  GF++ F+I   FR+ED  +   P EF  +++  ++ + +
Sbjct: 220 DQTFF-LRIATELYLKRLLVGGFEKIFEIGKNFRNEDIDTSHNP-EFTLIEIYEAYRDYN 277

Query: 248 DILNTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRRY 286
           D+++ ME  L  +       +           +  + RI  ++A+R Y
Sbjct: 278 DMMDLMEEFLSSLVNAIHGCDQVTFDEVVISFAGPWRRITMEEAVREY 325



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMP 534
             +++L  NG EIA+G    +     +         +       +        A   GMP
Sbjct: 399 TERFELFINGMEIANGFSELNDPIDQMNRLEAQDRKRLSGDLEAQMVDYDFINALGYGMP 458

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
           P GG+  G+DR+VMLL    +++EV LFP  +     +  +P      Q
Sbjct: 459 PTGGVGFGVDRVVMLLTNNTSIKEVILFPSMKK---PVADAPPNEDESQ 504


>gi|56961899|ref|YP_173621.1| lysyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81367474|sp|Q5WLU5|SYK_BACSK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|56908133|dbj|BAD62660.1| lysyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 502

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 63/340 (18%), Positives = 126/340 (37%), Gaps = 32/340 (9%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  ++           + +    V L+G +   R  G   F  I+D  G  Q+    
Sbjct: 38  RTHTSNEVIEQFAAFTKEELEEKDDHVVLAGRLMTKRGKGKAGFAHIQDIGGQIQIYVRQ 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E     +S  +  + G+               G++ +   ++ IL  +   PLP 
Sbjct: 98  DAVGEEAYGLFKSLDIGDMVGV------GGRPFKTKVGEMSVKVTELVILGKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL          + R++II  MR  +  + F+E  TP++ +  
Sbjct: 151 KYHGLKDVEQRYRQRYLDLITSPESRTAFITRSKIIQVMRRYLDEKGFLEVETPMMHSIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 211 GGASARPFVTHHNTLDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  DI+   E V+  + +E     TV      +    + +R       
Sbjct: 269 EFTMIELYEAYADYHDIMELTEGVIAHIAKEVLGTTTVQYGEHTVELAPSWKR------- 321

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
               + M +  +     +F             +   +P K
Sbjct: 322 ----VHMVDAIKEKTGVDFWQQMSDGEARALAKEHGVPVK 357



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 13/163 (7%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMESLK 470
            +AR  +A+E G+       F  +++  F+E   EE  I       +P  +    +    
Sbjct: 343 GEAR-ALAKEHGVPVKETMTFGHVVN-EFFEHFIEETLIQPTFVYGHPLAISP--LAKKN 398

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLY 526
             D       +++L   G E A+     +      + F    I +E  ++          
Sbjct: 399 EEDPR--FTDRFELFIVGREHANAFSELNDPIDQRKRFEAQLIEREQGDDEAHRMDEDFI 456

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            A + GMPP GG+  GIDR+VMLL  + ++R+V LFP  +N  
Sbjct: 457 EALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVILFPQMRNRE 499


>gi|57168540|ref|ZP_00367673.1| lysyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|305432957|ref|ZP_07402115.1| lysine--tRNA ligase [Campylobacter coli JV20]
 gi|57020045|gb|EAL56722.1| lysyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|304444111|gb|EFM36766.1| lysine--tRNA ligase [Campylobacter coli JV20]
          Length = 502

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 101/551 (18%), Positives = 187/551 (33%), Gaps = 124/551 (22%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            +SG +  +R  G  IF +I D     Q+  + DS   E     +    L +  +++   
Sbjct: 59  VISGRLKLLRIAGKSIFANIEDENENLQIYFSKDSLGEEKFNLFKKN--LEVGDIIL--- 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
           A+       TG+  L A +I + + +  +PLP           R++ R++D+  +  + K
Sbjct: 114 AKGFPFVTKTGEFSLHASEITLATKS-IVPLPEKYHGLTDIEQRYRKRYVDMIMNAEVRK 172

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           + + R+++++ +R     + F+E  TP++   +        V    + G    L  AP+ 
Sbjct: 173 DFLTRSKVVSLIRHFFEEKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPEL 232

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF+  F+I  CFR+E                          ++   N     
Sbjct: 233 YLKRLVVGGFEAVFEINRCFRNEG-------------------------MDLTHN----- 262

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
                        F  I +  A   Y            + ++TE        +F+ +L  
Sbjct: 263 -----------PEFTTIEFYWAYHNYKD----------LMDLTEE-------LFALLLEK 294

Query: 321 NPGYEVWAIPAKGGGGNRAFCDR-MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
               ++     +    ++ F      +  +  G                          L
Sbjct: 295 LQLGKIIEFDGQKIDFSKPFERITYKDALKKYGA-------------------------L 329

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
           +    E     L+    D   F A D L         +  +      +     +  +I D
Sbjct: 330 SDEIIENKDKILEKLKKDG--FEANDKL----DLGHLQAELFD--NYVESKLIDPTFITD 381

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           FP             + +P +           +D  S  A +++L   G E+A+G    +
Sbjct: 382 FP------------ISISPLSRR---------SDKNSEIAERFELFVCGRELANGFNELN 420

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F     +K   +            A   GMPP  G   GIDR+VMLL   K+
Sbjct: 421 DPLDQYERFLKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKS 480

Query: 556 VREVSLFPMSQ 566
           +R+V LFP  +
Sbjct: 481 IRDVILFPAMR 491


>gi|187932242|ref|YP_001892227.1| lysyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|187713151|gb|ACD31448.1| lysyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 576

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 17/300 (5%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RY   +  +L   D      L+G V   R  G   F+ ++D+ G  QV            
Sbjct: 122 RYADKTKQELEELDNKQQYNLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDLPDGQY 181

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++ ++   LC  G ++  +      N  TG++ + A   EIL+ A   PLP        +
Sbjct: 182 ETFKN---LCDLGDIVGITGTMFKTN--TGELSVEANHFEILTKAIR-PLPDKFHGLADQ 235

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            +R++ R++DL  +   + + K R++++N +R      +F+E  TP++       A    
Sbjct: 236 EMRYRQRYVDLITNEKAREVFKVRSKVVNFIRNYFDRLDFMEVETPMMHVLQGGAAAKPF 295

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                       L  AP+ Y + L+  GF+R ++I   FR+E   S   P EF  L+  +
Sbjct: 296 KTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNEGVSSRHNP-EFTMLEFYI 354

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPD 292
           ++ + +D+++  E++L  + +E      +            + RI   D+I +Y  D   
Sbjct: 355 AYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYNDDITK 414



 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 106/337 (31%), Gaps = 44/337 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---- 298
           + ++ D +     ++         G   +  F        +  Y    P+L    +    
Sbjct: 269 YFDRLDFMEVETPMMH-----VLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVVGG 323

Query: 299 MHNVTEHFVH-SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS-QGQPGL 356
              V E   +     V S+        E +   A          D +++  +   G   L
Sbjct: 324 FERVYEINRNFRNEGVSSRHNPEFTMLEFYIAYADYNDLMDLTEDMLSKLVQEVIGSEIL 383

Query: 357 AYIFWRLDESGNVAGMG---PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            Y  ++++  G    +     + K+ + +  E +      +            ++     
Sbjct: 384 EYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKK---IAEKLKIKVEAYHEL 440

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               N I +E   +     +  +I D+P               +P    Q G        
Sbjct: 441 GHLINEIFEE--TVEHQLIQPTFITDYP------------AVVSPLARRQDGNPEFTD-- 484

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  +++      E+A+G    + +E   + F     +     +          RA 
Sbjct: 485 -------RFEFFIGAREVANGFSELNDAEDQAERFRKQVEAAASGDDEAMPYDKDYIRAL 537

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP  G   GIDR+VM L  ++++R+V LFP  +
Sbjct: 538 EYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFPHMK 574


>gi|254251974|ref|ZP_04945292.1| Lysyl-tRNA synthetase (class II) [Burkholderia dolosa AUO158]
 gi|124894583|gb|EAY68463.1| Lysyl-tRNA synthetase (class II) [Burkholderia dolosa AUO158]
          Length = 508

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 65/308 (21%), Positives = 120/308 (38%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL      S           V ++G +   R  G   F  ++D  G  Q    P+
Sbjct: 43  THHAADLQAKFAESDKAALEADPVEVAVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPN 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               +   + +   +  I       +A  +      G++ +  +++ +LS +   PLP  
Sbjct: 103 DVGADTYDAFKKWDLGDI------VAARGVLFRTNKGELSVQCKELRLLSKSLR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + +R++ R++DL            RT+ I S+R  M   +F+E  TP+L     
Sbjct: 156 FHGLADQEMRYRQRYVDLIVTPETRDTFRARTKTIASIRKFMSDADFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T+            F R+    AI+
Sbjct: 274 FTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAQPFHRLTITQAIQ 333

Query: 285 RYGTDKPD 292
           +Y     D
Sbjct: 334 KYAPQYTD 341



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +        P       + +D +     +++L   G EIA+G    +  
Sbjct: 378 LFEETAEAQLWEPT-FIIDYPVEVSPLARASDTVPGITERFELFITGREIANGFSELNDP 436

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      K+  +           RA + GMPP GG   GIDR+VMLL  +  +R
Sbjct: 437 EDQAARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIR 496

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 497 DVLLFP 502


>gi|167837159|ref|ZP_02464042.1| lysyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 508

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 66/308 (21%), Positives = 117/308 (37%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL      +           V ++G +   R  G   F  ++D  G  Q    P 
Sbjct: 43  THRAADLQTEYADADKEALEAKPLEVAIAGRMMLKRVMGKASFATVQDGSGQIQFFVTPA 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +L+ A   PLP  
Sbjct: 103 DVGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVKCTELRLLTKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 +  R++ R++DL            RT+ I S+R  M    F+E  TP+L     
Sbjct: 156 FHGLADQETRYRQRYVDLIVTPETRATFRARTKAIASIRKFMSDAEFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T+            F R+    AIR
Sbjct: 274 FTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATIQYQGRELDLAKPFHRLTITQAIR 333

Query: 285 RYGTDKPD 292
           +Y  +  D
Sbjct: 334 KYAPNYTD 341



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +         +    + + +D ++    +++L   G EIA+G    +  
Sbjct: 378 LFEETAEAQLWEPTFIIDYPIEVSPLA-RESDTVTGITERFELFITGREIANGFSELNDP 436

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      K+  +           RA + GMPP GG   GIDR+VMLL  +  +R
Sbjct: 437 EDQAARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIR 496

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 497 DVLLFP 502


>gi|154499801|ref|ZP_02037839.1| hypothetical protein BACCAP_03458 [Bacteroides capillosus ATCC
           29799]
 gi|150271399|gb|EDM98656.1| hypothetical protein BACCAP_03458 [Bacteroides capillosus ATCC
           29799]
          Length = 500

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 65/284 (22%), Positives = 116/284 (40%), Gaps = 20/284 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            +  G  V ++G +   R  G  +F D++D  G  Q+    D    E     +   +  I
Sbjct: 56  ETMEGQTVSVAGRLMSKRGMGKAVFCDLQDAQGRIQLYVRIDELGEEPFARFKKVDIGDI 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      E        G+I + A K+ +LS +   PLP        +  R++ R++DL
Sbjct: 116 VGV------EGEAFRTKRGEISVKANKVTLLSKSLR-PLPEKFHGLTDKETRYRQRYVDL 168

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
                + +N V R+R I  MR  +    +IE  TP+L T +    AR F+          
Sbjct: 169 MVNPEVKRNFVVRSRFIQFMRSYLDNMGYIEVETPVLNTIAGGAAARPFITHHNTLDIDM 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y +  A +   + L+  G DR ++I   FR+E       P EF  +++  ++ +   +++
Sbjct: 229 Y-MRIATELPLKRLIVGGMDRVYEIGRIFRNEGMDPKHNP-EFTTVELYQAYTDFHGMMD 286

Query: 252 TMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
             E +L G  +       V            + R+   DA++ Y
Sbjct: 287 IAEGILSGAAQSILGTYEVEWQGEKLNLAPGWRRLTMVDAVKEY 330



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 7/129 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           ++   EE+ I       TM    +  L K +        +++L     E+A+     +  
Sbjct: 371 FDQKVEEQLIQPTF--ITMYPVEVSPLTKRSPQDPRLTERFELFVCHSELANAYSELNDP 428

Query: 502 EVM----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                   +         E  E        A + GMPP GG+  GIDR VM+L  A  +R
Sbjct: 429 IDQRSRFEKQLELRERGDEETEMLDEDFLTALEYGMPPTGGMGMGIDRCVMMLTNADTIR 488

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 489 DVILFPTMK 497


>gi|325578590|ref|ZP_08148690.1| lysine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159826|gb|EGC71956.1| lysine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 502

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 66/289 (22%), Positives = 122/289 (42%), Gaps = 19/289 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F+ ++D  G  Q+    D+    +       W L   G ++ 
Sbjct: 63  EVAVAGRIMTRRAMGKATFITLQDMSGKIQLYVARDNLPEGVYAEDVGSWDL---GDIIG 119

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL- 138
                      T ++ +   ++++L+ A   PLP           R++ R+LDL  +   
Sbjct: 120 VKGTLF--KTKTNELTIKTTEVQLLTKALR-PLPNKFHGLTDMEARYRQRYLDLISNEES 176

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            +  + R++++  +R   I++ F+E  TP+L        AR F+          Y L  A
Sbjct: 177 RRTFIIRSKVVAGIREFFISKGFMEVETPMLQVIPGGASARPFITHHNALDVDMY-LRIA 235

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+++  E +L
Sbjct: 236 PELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNTEELL 294

Query: 258 RGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           R +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 295 RKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATIKYGADKGIVKEDL 343



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 12/180 (6%)

Query: 396 GDSCFFIAGDPLKFCSFAADA-RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            D+      D         D  R    A+ LGI     +    I++   +E   E   I 
Sbjct: 326 HDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQ 384

Query: 454 FAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                F M      S     ND       +++L   G EI +G    + +E   + F   
Sbjct: 385 PT---FLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQ 441

Query: 512 GISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 442 VAAKEAGDDEAMFKDDDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 501


>gi|228478164|ref|ZP_04062772.1| lysyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228249843|gb|EEK09113.1| lysyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 496

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 67/340 (19%), Positives = 126/340 (37%), Gaps = 30/340 (8%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             ++     ++G +   R  G + F  I+D  G  Q+    
Sbjct: 37  RTATSGQLKEKYADKTKEELHEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGIEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  + A+ F+E  TP+L   +
Sbjct: 150 KFHGLSDVETIYRKRYLDLISNRDSFDRFVTRSKIISEIRRYLDAQGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  +++  ++ +  DI+N  E +++   +       ++           F RI   DAI+
Sbjct: 269 FTSIEVYQAYADFHDIMNLTEGIIQHAAKAVKGDGPINYQGTEIKINEPFKRIHMVDAIK 328

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
                  D    + +             V      V    
Sbjct: 329 E--ITGVDFWQDMTLDEAKAIAAEKNVPVEKHYTEVGHII 366



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K N        +++L     E  +     +     L  F     +KE+ ++   G     
Sbjct: 396 KKNPEDPRFTDRFELFIMTKEYGNAFTELNDPIDQLSRFEAQAAAKELGDDEATGIDYDY 455

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 456 VEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|325925183|ref|ZP_08186596.1| lysyl-tRNA synthetase (class II) [Xanthomonas perforans 91-118]
 gi|325544437|gb|EGD15807.1| lysyl-tRNA synthetase (class II) [Xanthomonas perforans 91-118]
          Length = 505

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 68/302 (22%), Positives = 119/302 (39%), Gaps = 25/302 (8%)

Query: 5   RTHSCGDLGVSDV-------------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL                  G  VR++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPEALEASGRTVRMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              +           + +     G +++           TG++ + A  + +L+ +   P
Sbjct: 101 LQGNVLG-----DAYTAFKGWDVGDIVAVEGGL--TRTKTGELSVKAGALRLLTKSLR-P 152

Query: 112 LPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP           R++ R++DL       +  +KR++II +MR  + A  F+E  TP++ 
Sbjct: 153 LPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPMMH 212

Query: 171 -ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   +  
Sbjct: 213 YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRH 271

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  L++  ++     I++  E V+R   +       VS +   I    A RR+  D
Sbjct: 272 NP-EFTMLELYEAYATYHQIMDLTEQVIRDTAQTVLGTTQVSWDGADIDLAPAFRRWRMD 330

Query: 290 KP 291
           + 
Sbjct: 331 EA 332



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           + +D       +++L  NG E+A+G    +  E     F     +K+  ++         
Sbjct: 402 RSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMHFDADY 461

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 462 IRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|11387152|sp|Q9RHV9|SYK_BACST RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|6681368|dbj|BAA88691.1| lysyl-tRNA synthetase [Geobacillus stearothermophilus]
          Length = 494

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 69/330 (20%), Positives = 125/330 (37%), Gaps = 32/330 (9%)

Query: 5   RTHSC-------GDLGVSDVGS---FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH         GDL   ++      V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 34  RTHKAEELFELYGDLSKEELEEQQIEVAVAGRIMTKRGMGKAGFAHIQDVTGQIQIYVRQ 93

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    +  +  +   +  I G+               G++ +     E L+ A   PLP 
Sbjct: 94  DDVGEQQYELFKISDLGDIVGV------RGTMFKTKVGELSIKVSSYEFLTKALR-PLPE 146

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +   K   + R+ II SMR  + +  ++E  TP++ A +
Sbjct: 147 KYHGLKDIEQRYRQRYLDLIMNPESKKTFITRSLIIQSMRRYLDSHGYLEVETPMMHAVA 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+        + Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 207 GGAAARPFITHHNALDMTLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP- 264

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  L++  ++ +  DI+   EN++  +  E      +            + R+   DAI
Sbjct: 265 EFTMLELYEAYADFRDIMKLTENLIAHIATEVLGTTKIQYGEHLVDLTPEWRRLHMVDAI 324

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           + Y     D    +      E        V
Sbjct: 325 KEY--VGVDFWRQMSDEEARELAKEHGVEV 352



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 6/154 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E G+       F  I++  F+E   E+K I          +    + K  D    
Sbjct: 342 RELAKEHGVEVAPHMTFGHIVN-EFFEQKVEDKLIQPTFIYGHPVEISPLAKKNPD-DPR 399

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
              +++L   G E A+     +      Q F      +E               A + GM
Sbjct: 400 FTDRFELFIVGREHANAFTELNDPIDQRQRFEEQLKEREQGNDEAHEMDEDFLEALEYGM 459

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  G+DR+VMLL  + ++R+V LFP  ++
Sbjct: 460 PPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMRH 493


>gi|145637999|ref|ZP_01793635.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145268809|gb|EDK08776.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 503

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 67/289 (23%), Positives = 122/289 (42%), Gaps = 19/289 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F+ ++D  G  Q+    D+    +       W L   G ++ 
Sbjct: 64  EVAVAGRIMTRRAMGKATFITLQDMSGKIQLYVARDNLPEGVYAEDVGNWDL---GDIIG 120

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL- 138
                      T ++ +   ++++L+ A   PLP           R++ R+LDL  +   
Sbjct: 121 VKGTLF--KTKTNELTIKTTEVQLLTKALR-PLPNKFHGLTDMEARYRQRYLDLISNEES 177

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            +  + R++++  +R   I++ F+E  TP+L        AR F+          Y L  A
Sbjct: 178 RRTFIIRSKVVAGIREFFISKGFMEVETPMLQVIPGGASARPFITHHNALDVDMY-LRIA 236

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E   S R   EF  L+   S+ +  D+++  E +L
Sbjct: 237 PELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQSYADYHDLMDNTEELL 295

Query: 258 RGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPI 297
           R +  +      V            F RI   DA  +YG DK  ++  +
Sbjct: 296 RKLAIDILGTTIVKYGDLEFDFGKPFERITLHDATIKYGADKGIVKEDL 344



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 12/180 (6%)

Query: 396 GDSCFFIAGDPLKFCSFAADA-RNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
            D+      D         D  R    A+ LGI     +    I++   +E   E   I 
Sbjct: 327 HDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNA-IFEEVAEHHLIQ 385

Query: 454 FAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                F M      S     ND       +++L   G EI +G    + +E   + F   
Sbjct: 386 PT---FLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQ 442

Query: 512 GISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +KE  ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 443 VAAKEAGDDEAMFKDDDFVVALEHGLPPTAGEGLGIDRLAMLYANASSIRDVILFPAMRQ 502


>gi|73662599|ref|YP_301380.1| asparaginyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|82582282|sp|Q49XR0|SYN_STAS1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|72495114|dbj|BAE18435.1| asparaginyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 430

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 81/322 (25%), Positives = 122/322 (37%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +G  V +  W+   R  G I FL +RD  G  Q     A  D   F+ AK +  E  
Sbjct: 9   KQYIGQEVTIGAWLTNKRSSGKIAFLQLRDGTGFIQGVVAKAEVDEEIFQKAKEITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G++   +   I         E+  + IE++S A + P+     + +       +R 
Sbjct: 69  LYVTGVISEDNRSDI-------GYEMQVKSIEVISEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II +         F +   PILTAS+PEG  +       +Q +
Sbjct: 119 LWLRSKKQHAVMKIRNEIIRATYEFFNDNGFTKIDPPILTASAPEGTSELFHTKYFDQDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ ++ EM+F E    L
Sbjct: 179 F--LSQSGQLYMEAA-AMAHGRVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFCEHAQSL 235

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  V +   N   +                  F RI Y DA+      G D  +
Sbjct: 236 EVQEQYVTHVVKSVLNHCKLELKALDRDTSKLEKVTTPFPRITYADAVIFLKEQGFDDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 296 WGEDFGAPHETAIANHYDLPVF 317



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 62/194 (31%), Gaps = 31/194 (15%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE---- 433
            L +   +    +L+            D + F            ++ G  +         
Sbjct: 254 KLELKALDRDTSKLEKVTTPFPRITYADAVIFLKEQGFDDIEWGEDFGAPHETAIANHYD 313

Query: 434 -FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFE 490
              +I ++P                PF M       +++   DL++ + +         E
Sbjct: 314 LPVFITNYP------------TKIKPFYMQPNPENEDTVLCADLIAPEGYG--------E 353

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R +  E++ +  S   +        +       + G  PH G   G++R V  L
Sbjct: 354 IIGGSERINDLELLEERLSQFELDA----ESYSYYLDLRRYGSVPHSGFGLGLERTVAWL 409

Query: 551 LGAKNVREVSLFPM 564
            G ++VRE + FP 
Sbjct: 410 SGVEHVRETAPFPR 423


>gi|300087728|ref|YP_003758250.1| lysyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527461|gb|ADJ25929.1| lysyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 493

 Score =  205 bits (522), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 77/384 (20%), Positives = 148/384 (38%), Gaps = 36/384 (9%)

Query: 4   YRTHSCGD-----LGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           +RTH+  +     +     G     V ++G V   R  G + FLDIRD     Q+  +  
Sbjct: 32  HRTHTNLEALDTLIKAEKDGKEPGVVTVAGRVVSRRDMGKLCFLDIRDSSQKIQLFCSAK 91

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +       S+++  +    G  +  + + I     +G+  ++   + I++ + + PLP  
Sbjct: 92  NLSESSIFSLKNLDI----GDFVGATGQLIRTR--SGEPSVNTSNLVIINKSLQ-PLPEK 144

Query: 116 GEREYPESIRFKYRFLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                    R + R+LDL  +       + R  II+ +R  +    F+E  TP+L + + 
Sbjct: 145 WHGLQDTEKRHRQRYLDLISNPEGRNIFITRCSIISGIRNFLNNNGFLEVETPVLQSQAC 204

Query: 175 EGA-RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
             A R F+        S Y L  A + Y + L+  GFD  ++I   FR+E       P E
Sbjct: 205 GAAARPFVTYHNALDQSMY-LRIALELYLKRLLVGGFDGVYEIGRIFRNEGISVKHNP-E 262

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  L+   ++ + +D+++  E ++ G+ E+   G       + + +     R      D 
Sbjct: 263 FTMLECYKAYADYNDMMDLTEKMVSGIVEQIYGGYQAPYGDITLDFTPPWPRL-----DF 317

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
           R  ++  +        +F  +S    +        + A          D   E      +
Sbjct: 318 RTLLLEKS------GVDFLAYSDADGLRNKMIESGLEADVAKDKGQLID---ELVAQFIE 368

Query: 354 PGLAYIFWRLDESGNVAGMGPVAK 377
           P L    + +D    +    P+AK
Sbjct: 369 PNLVQPCFLIDYPIEL---SPLAK 389



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 59/170 (34%), Gaps = 30/170 (17%)

Query: 400 FFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF 459
              +G             + +  +   I  N  + C+++D+P                  
Sbjct: 342 MIESGLEADVAKDKGQLIDELVAQF--IEPNLVQPCFLIDYPI----------------- 382

Query: 460 TMPQGGMESLKGNDL-LSIKAFQYDLVCNGFEIASGGIRNHMSEVM-----LQAFSNVGI 513
                 +  L       S    +++   +G EIA+     +  +        Q       
Sbjct: 383 -----ELSPLAKTKPGESGIVERFEAFAHGMEIANAFSELNDPQEQYLRFAQQLEGETQS 437

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             +  E        A + GMPP GG+  GIDR+VMLL   K++REV LFP
Sbjct: 438 QTDDTETIDRDFITALEYGMPPTGGLGIGIDRLVMLLTNQKSIREVILFP 487


>gi|163938085|ref|YP_001642969.1| lysyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229009586|ref|ZP_04166813.1| Lysyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229053923|ref|ZP_04195358.1| Lysyl-tRNA synthetase [Bacillus cereus AH603]
 gi|229165065|ref|ZP_04292861.1| Lysyl-tRNA synthetase [Bacillus cereus AH621]
 gi|226710882|sp|A9VN90|SYK_BACWK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|163860282|gb|ABY41341.1| lysyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228618450|gb|EEK75479.1| Lysyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228721464|gb|EEL72984.1| Lysyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228751730|gb|EEM01529.1| Lysyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 499

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 60/312 (19%), Positives = 123/312 (39%), Gaps = 20/312 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   ++   V ++G +   R  G   F  I+D  G  Q+    D+   E  +   +  +
Sbjct: 55  ELEEKEI--TVSIAGRIMTKRGKGKAGFAHIQDLQGQVQIYVRKDTVGDEEYELFTTADL 112

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               G ++    +    N+  G++ + A    +L+ +   PLP           R++ R+
Sbjct: 113 ----GDLVGIEGKVFKTNV--GELSVKAIGFTLLTKSLR-PLPDKYHGLKDVEQRYRQRY 165

Query: 131 LDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQ 188
           LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F        
Sbjct: 166 LDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFTTHHNALD 225

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + +D
Sbjct: 226 MELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYND 283

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPIIMHN 301
           I+   EN++  + ++     T+      I  +    R             D  NP+ +  
Sbjct: 284 IMKLTENMVAHIAKKVLGTTTIQYGDYEINLEPEWTRLHMVDAIKQHSGADFWNPMSVEE 343

Query: 302 VTEHFVHSEFRV 313
             E        +
Sbjct: 344 ARELAKEHNVEI 355



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   N  E   I++  F+E   E+K I      +  P       K ND    
Sbjct: 345 RELAKEHNVEIKNTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDEDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|78047472|ref|YP_363647.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|123771380|sp|Q3BUB6|SYK_XANC5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78035902|emb|CAJ23593.1| lysyl-tRNA synthetase heat inducible [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 505

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 68/302 (22%), Positives = 119/302 (39%), Gaps = 25/302 (8%)

Query: 5   RTHSCGDLGVSDV-------------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R H  GDL                  G  VR++G +   R  G   F  I+D  G  Q+ 
Sbjct: 41  REHFAGDLQAEFADADTWTPEALEASGRTVRMAGRLMAKRVMGKASFAQIQDESGRVQLF 100

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              +           + +     G +++           TG++ + A  + +L+ +   P
Sbjct: 101 LQGNVLG-----DAYTAFKGWDVGDIVAVEGGL--TRTKTGELSVKAGALRLLTKSLR-P 152

Query: 112 LPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP           R++ R++DL       +  +KR++II +MR  + A  F+E  TP++ 
Sbjct: 153 LPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETPMMH 212

Query: 171 -ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F           Y L  AP+ Y + L+  G +R ++I   FR+E   +  
Sbjct: 213 YIPGGATAKPFTTHHNALDLDLY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRH 271

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  L++  ++     I++  E V+R   +       VS +   I    A RR+  D
Sbjct: 272 NP-EFTMLELYEAYATYHQIMDLTEQVIRDTAQTVLGTTQVSWDGADIDLAPAFRRWRMD 330

Query: 290 KP 291
           + 
Sbjct: 331 EA 332



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           + +D       +++L  NG E+A+G    +  E     F     +K+  ++         
Sbjct: 402 RSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAARFQAQVQAKDGGDDEAMHFDADY 461

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 462 IRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499


>gi|332284054|ref|YP_004415965.1| lysyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330428007|gb|AEC19341.1| lysyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 506

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 64/318 (20%), Positives = 134/318 (42%), Gaps = 23/318 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +++VG  V+++G +   R  G   F  ++D  G  Q+  + ++   ++    ++  +   
Sbjct: 59  LAEVGKQVKVAGRMMLKRVMGKASFATLQDSSGRIQIFLDKNTVGEDLYTQFKTWDI--- 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +++        N   G++ + A  + +L+ +   PLP          +R++ R++DL
Sbjct: 116 -GDIVAVEGAMFKTN--KGELSVHAATVRLLTKSLR-PLPDKFHGVADTELRYRQRYVDL 171

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              +   +  + R++ I S+R  MI   F+E  TP+L        A+ F+          
Sbjct: 172 IMTEETRRCFLARSKAIGSIRHHMINAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMEM 231

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + L  AP+ Y + L+  GFDR F++   FR+E   S R   EF  ++   ++ +   +++
Sbjct: 232 F-LRIAPELYLKRLVVGGFDRVFEVNRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMD 289

Query: 252 TMENVLR---------GVFEEFSNGNTVSNNFLRICYDDAIRRY--GTDKPDLRNP-IIM 299
             E ++R          V         +S  F R+    AI +Y  G  +  L++   + 
Sbjct: 290 FTETLIREAAIAASGSAVLTYQEKVLDLSQPFDRLTIVQAILKYAPGYTQEQLQDGTFLR 349

Query: 300 HNVTEHFVHSEFRVFSKI 317
             +          V ++ 
Sbjct: 350 TELKRLGADVNGPVLARA 367



 Score =  107 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 61/162 (37%), Gaps = 27/162 (16%)

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
           P+   +     +  + +E        +   +I+D+P                        
Sbjct: 362 PVLARAGLGGLQLALFEE--TAEAKLWNPTYIIDYP---------------------VEV 398

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF--- 522
               + +D       +++L   G EIA+G    +  E     F     +K+  +      
Sbjct: 399 SPLARASDTQEGITERFELFMTGREIANGFSELNDPEDQAARFLAQVEAKDAGDEEAMYY 458

Query: 523 -GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                RA + GMPP GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 459 DADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVILFP 500


>gi|78223563|ref|YP_385310.1| lysyl-tRNA synthetase, class-2 [Geobacter metallireducens GS-15]
 gi|78194818|gb|ABB32585.1| Lysyl-tRNA synthetase, class-2 [Geobacter metallireducens GS-15]
          Length = 491

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 66/279 (23%), Positives = 123/279 (44%), Gaps = 11/279 (3%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +   R  G   F+ ++D  G  Q+    D+   E  ++  S  +  I G      
Sbjct: 57  VVAGRIIARRSFGKAAFVQLQDRKGRIQLYVRKDTLGDEAYEAFESFDIGDIIG------ 110

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHK 140
           A        TG++ L+A ++ +L+ +  LPLP           R++ R++DL     + +
Sbjct: 111 ATGTPFRTKTGELSLNASEVRLLTKS-FLPLPEKFHGLTDVETRYRQRYVDLIVNPEVRE 169

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             +KR+RI+N +R  M+  +F+E  TP++        AR F+          + L  AP+
Sbjct: 170 VFIKRSRIVNLIREFMVRHDFLEVETPMMQPIPGGATARPFVTHHNALDMELF-LRIAPE 228

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++   +D+++  E +L  
Sbjct: 229 LYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYQAYATFEDLMDFTEELLCH 287

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           V +E       +   + I +    +R    +  L    I
Sbjct: 288 VTQEVLGTLDFTYQGVEISFQRPWKRLTVKEAILEYGDI 326



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 7/130 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           +E   E K I       T     +  L + +D       +++  C G E+A+     +  
Sbjct: 362 FEEVAEVKLIQPTF--ITAYPTEVSPLSRKSDKDPDIVDRFEFFCAGREMANAFSELNDP 419

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      K   +           RA + GMPP  G   GIDR+VMLL  + ++R
Sbjct: 420 VDQKERFLGQVAQKAKGDEEAHYMDEDYIRALEYGMPPTAGEGIGIDRLVMLLTDSPSIR 479

Query: 558 EVSLFPMSQN 567
           +V LFP  + 
Sbjct: 480 DVILFPQLRK 489


>gi|325479516|gb|EGC82612.1| lysine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 632

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 145/367 (39%), Gaps = 29/367 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  VR++G +   R HG + F+DI+D  G  Q+  N  +   E  K V+   +  I G+ 
Sbjct: 52  GKEVRIAGRIMAKRGHGNMSFMDIQDESGQIQI-VNRKNVIGEEFKQVKKYDIGDIVGI- 109

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                +        G+I +  +K  +++ + ++ LP          +R++ R+LDL  + 
Sbjct: 110 -----DGKVFKTNQGEISIETEKPVLMTKSLQI-LPEKWHGLKDPDLRYRQRYLDLIVNP 163

Query: 138 LHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
             K++   R++II+ +R  +    F+E  TPIL   +             +      L  
Sbjct: 164 EVKDVFVQRSQIISEIRRFLDGRGFLEVETPILNTIAGGATARPFTTHHNSLNIGMYLRI 223

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + Y + L+  GFD+ ++I   FR+E   +   P EF  +++  ++ + +D++   E +
Sbjct: 224 ASELYLKRLIVGGFDKVYEIGRMFRNEGMDATHNP-EFTTMELYQAYGDFEDMMEITETM 282

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +  V ++      V  +   I      +R           + M +  + +   +F   S 
Sbjct: 283 VETVAQKVKGTTVVEFDGNEIELKAPWKR-----------MTMIDAVKEYSGVDFNEISD 331

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
                   +   +  KG  G     +  +E+   +       I         V  + P+A
Sbjct: 332 YDEAVSKAKENNVEVKGTIG-EIIAEFFDEFVEDK------LIQPTFITDYPVE-ISPLA 383

Query: 377 KHLNIVN 383
           K  N   
Sbjct: 384 KRKNDDE 390


>gi|292670845|ref|ZP_06604271.1| lysine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292647466|gb|EFF65438.1| lysine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 503

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 79/360 (21%), Positives = 137/360 (38%), Gaps = 35/360 (9%)

Query: 2   HRYR-THSCGDLGVS-------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           HR+  T    DL          + G  V ++G +  +R HG   F  + D  G  QV   
Sbjct: 40  HRFEVTDYAADLKEKYDSLAEDEEGKEVYIAGRLMAIRGHGKASFSTLNDRTGNIQVYFK 99

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D    +  K    E+     G ++      +      G+I +  +   +LS A   PLP
Sbjct: 100 LDVLGEQKYKE---EFKRLDIGDIIGIRG--VVFKTRRGEITVRVEDFNLLSKALR-PLP 153

Query: 114 VFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TA 171
                      R++ R++DL  +  +     KRTRII S+R  +   +F+E  TP+L T 
Sbjct: 154 EKFHGLKDVDTRYRQRYIDLMVNYEVRDTFRKRTRIIQSIRRYLDERDFLEVETPVLSTI 213

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F+          Y L  A +   + L+  G DR +++   FR+E       P
Sbjct: 214 AGGAAARPFITHHNALDIDLY-LRIATELNLKRLIVGGLDRVYEMGRIFRNEGMDVRHNP 272

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF  +++  +F +  D++   E ++R   +                   A +    D  
Sbjct: 273 -EFTTIEIYQAFADYRDLMEITEGIVRHAAKSVLG-----------TTQIAYQGVNIDLD 320

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK-----GGGGNRAFCDRMNE 346
           ++R  I M++        +F     +           +P +     GG  N AF +++ E
Sbjct: 321 NVRT-ISMNDSVRQATGKDFLSCQTVDEARAMARAIGVPFEERYGIGGILNAAFEEKVEE 379



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/176 (22%), Positives = 68/176 (38%), Gaps = 7/176 (3%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
             DS     G     C    +AR  +A+ +G+     +    I++  F E  EE   +  
Sbjct: 327 MNDSVRQATGKDFLSCQTVDEAR-AMARAIGVPFEERYGIGGILNAAFEEKVEET--LMQ 383

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
                  P       K N        +++    G E+A+G    +      Q F      
Sbjct: 384 PTFITGHPTEISPLAKRNPDDPRITDRFEFFVYGRELANGFTELNDPIDQEQRFLEQLEQ 443

Query: 515 KEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           ++  +            A + G+PP GG+  G+DR+VMLL  + ++R+V LFP  +
Sbjct: 444 RQAGDAEAHVMDRDYITALEYGLPPTGGLGIGVDRLVMLLTDSPSIRDVLLFPTMK 499


>gi|77409348|ref|ZP_00786050.1| lysyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77172050|gb|EAO75217.1| lysyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 496

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 69/355 (19%), Positives = 134/355 (37%), Gaps = 29/355 (8%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             D+     ++G +   R  G + F  I+D  G  Q+    
Sbjct: 37  RTATSGQLNEKYADKSKEDLHDIEETATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   E  +  +   +    G  +    + +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DSVGEENYEIFKKADL----GDFLGVEGQVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R LDL  +       V R++II+ +R  M +  F+E  TP+L   +
Sbjct: 150 KFHGLTDIETIYRKRHLDLISNRDSFDRFVTRSKIISEIRRFMDSNGFLEVETPVLHNEA 209

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+            L  A + + + L+  G +R ++I   FR+E   +   P 
Sbjct: 210 GGASARPFITHHNAQDIDM-VLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  ++   ++ +  DI++  E +++ V +       ++     I  ++  +R       
Sbjct: 268 EFTSIEAYQAYADYQDIMDLTEGIIQHVTKTVKGDGPINYQGTEIKINEPFKRVHMVDA- 326

Query: 293 LRNPIIMHNVTEHFVHSEFRV-FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                 +  +T+     E  +  ++ L+      +       G    AF +   E
Sbjct: 327 ------VKEITDIDFWKEMTLEEAQALAQEKNVPLEKHFTTVGHIINAFFEEFVE 375



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ E+   +      F  P       K ND       +++L     E A+   
Sbjct: 365 IINAFFEEFVEDT--LIQPTFVFGHPVEVSPLAKKNDTDPRFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 423 ELNDPIDQLSRFEAQASAKELGDDEATGVDYDYVEALEYGMPPTGGLGIGIDRLCMLLTD 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 TTTIRDVLLFPTMK 496


>gi|56751700|ref|YP_172401.1| lysyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81301224|ref|YP_401432.1| lysyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81561805|sp|Q5N1D9|SYK_SYNP6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123769185|sp|Q31KH4|SYK_SYNE7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|56686659|dbj|BAD79881.1| lysyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81170105|gb|ABB58445.1| lysyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 504

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 64/348 (18%), Positives = 131/348 (37%), Gaps = 33/348 (9%)

Query: 2   HRYR---THSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           + YR   +HS   L           +V   V ++G +   R  G + F  ++D  G  Q+
Sbjct: 23  YAYRWDCSHSAAQLQALYADLPAGEEVAVEVAIAGRIMARRVFGKLAFFTLQDESGQIQL 82

Query: 51  VANPDSACFEIA----KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV 106
                     +A    ++      L   G ++             G++ ++  +  IL+ 
Sbjct: 83  YLEKQRLSESMAAIDAEAFSHLKALTDVGDILGVKGSVRRTE--KGELSIAVDQYAILTK 140

Query: 107 AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRT-RIINSMRCRMIAENFIECS 165
           + + PLP           R++ R++DL  +   +   +R  +I  ++R  +  + FIE  
Sbjct: 141 SLQ-PLPDKWHGLTDVEKRYRQRYVDLIVNPEVRETFRRRAKITAAIRRHLEDQGFIEIE 199

Query: 166 TPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
           TP+L A +    AR F+      +   Y L  A + + + L+  GF++ F++   FR+E 
Sbjct: 200 TPVLQAEAGGAEARPFITYHNTLELDLY-LRIATELHLKRLIVGGFEKVFELGRIFRNEG 258

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
             +   P EF  +++  ++ + +D++   E ++  V E+      V      I      +
Sbjct: 259 ISTRHNP-EFTSIEVYQAYADYEDMMRLTETLIAQVAEQVVGSLQVPYQGQTIDLAPPWK 317

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
           R             M  +       +F     + +     +   IP  
Sbjct: 318 R-----------ATMAELVLAATGIDFESLKDLEAGIAAVKAAGIPVP 354



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 53/158 (33%), Gaps = 27/158 (17%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
           C       NH  +E   +     +  +++D+P      E   +   H             
Sbjct: 357 CPNLGKLLNHCFEE--KVEATLIQPTFVIDYPV-----EISPLAKPHR------------ 397

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
                      +++L   G E A+            Q        K        +     
Sbjct: 398 ----SKPGLVERFELFIVGRETANSFSELTDPVDQRQRLEAQAADKAAGNVEANDVDEDF 453

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A + GMPP GG+  GIDR+VMLL  + ++R+V  FP
Sbjct: 454 LLALEHGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFP 491


>gi|284048762|ref|YP_003399101.1| lysyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952983|gb|ADB47786.1| lysyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 664

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 79/385 (20%), Positives = 151/385 (39%), Gaps = 36/385 (9%)

Query: 2   HRYR-THSCGDLGV-----SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           H Y+ TH   ++          G+ V+++G +  +R HG   F+D++D  G  Q+    D
Sbjct: 45  HAYQWTHHTKEVHDQVEAMEAAGTVVKVAGRLLAIRGHGKTCFMDLQDKTGKIQLYVRKD 104

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               +    V+   +  I G+      E        G+  +  QK+E LS A + PLP  
Sbjct: 105 EMGEDAYSVVKLLDIGDIVGV------EGPVFKTHMGEPSIRVQKLEFLSKALK-PLPEK 157

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASS 173
                 + IR++ R++DL  +   ++  VKRT+II  +R  +  + ++E  TP+L T S 
Sbjct: 158 WHGLKDKEIRYRQRYVDLIVNPEVRDVFVKRTQIIKCIRQVLDDQGYLEVETPVLNTISG 217

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A +   + L+  G +R +++   FR+E       P E
Sbjct: 218 GATARPFITHHNALDIDLY-LRIATELNLKRLVVGGLERVYELGRVFRNEGMDIKHNP-E 275

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  L+   +F + + +++  E ++    E+      +      I       R        
Sbjct: 276 FTTLECYEAFGDFNTMMDLTEKIVTTCAEKVLGTLKIQYEGTEIDLTGPWPR-------- 327

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNEWARSQG 352
              + M +  + +   +F     + +         +  +   G     +   +E+     
Sbjct: 328 ---MTMIDAVKKYSGKDFTGVKDVETARQLAREAGVAVEPAWGVGKIINAFFDEFVEKN- 383

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAK 377
              +  IF      G+   + P+AK
Sbjct: 384 --LIQPIFIT----GHPKEISPLAK 402



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/176 (22%), Positives = 70/176 (39%), Gaps = 11/176 (6%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE--KKIDF 454
           D+    +G           AR  +A+E G+     +    I++  F E+ E+   + I  
Sbjct: 332 DAVKKYSGKDFTGVKDVETARQ-LAREAGVAVEPAWGVGKIINAFFDEFVEKNLIQPIFI 390

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             +P  +    +      D       +++    G E+ +G    +      + F      
Sbjct: 391 TGHPKEISP--LAKSSAADPE--ITDRFEGYIFGRELCNGFTELNDPLDQKERFEKQVEE 446

Query: 515 KEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +   ++  G        A   G+PP GG+  GIDR+VM L GA ++R+V LFP  +
Sbjct: 447 RNAGDDEAGMMDEDFINALMHGLPPTGGLGIGIDRLVMFLTGAVSIRDVLLFPTMK 502


>gi|119025394|ref|YP_909239.1| lysyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|118764978|dbj|BAF39157.1| lysyl-tRNA synthetase 1 [Bifidobacterium adolescentis ATCC 15703]
          Length = 587

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 111/568 (19%), Positives = 197/568 (34%), Gaps = 122/568 (21%)

Query: 5   RTHSCGDLGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANPDSACFEI 61
           R    G L   D  G  V ++G V  +R  GG+ F+ +   D   I  +++  +      
Sbjct: 127 RAKYDGKLEAGDETGDVVGIAGRVLFLRNAGGLCFVQLSAGDGTKIQGMISKKEIG---- 182

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S++    L   G  +      I +   TG++ + A +  I + A +    +   +E  
Sbjct: 183 ADSLKQFKQLVDLGDHLFIKGRVIASK--TGELSVFATEWAIAAKALQPLPAL--HKELN 238

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           E  R +  ++ +  D   +N+V+ R++ + S+R      +F+E  TP+L T      AR 
Sbjct: 239 EDTRTRKPYIGMIADEKIRNMVRNRSKAVASLRKTFADHDFLEVETPMLQTVHGGAAARP 298

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           Y L  AP+ + +  +  G DR F+I   FR+E   +   P EF  ++ 
Sbjct: 299 FTTHMNAFDLDLY-LRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAP-EFTMVEA 356

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++   D I   ++ +++                     D A+  +G+ K      + +
Sbjct: 357 YQAYGNYDTIGALVKQLVQ---------------------DTAMDVFGSHK------VTL 389

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            + TE+    E++  S   S++       +P  G        + + E A   G       
Sbjct: 390 LDGTEYDFGGEWKTISMYDSLSEALGEEIVPNGGPDNPGTSVEHLGEIADKLG------- 442

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E  +V   G + +HL                                        
Sbjct: 443 ----VERDDVENHGKLVEHLWEH------------------------------------- 461

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
                       +E  ++ DFP      E   +   H                   +   
Sbjct: 462 ------FYEDKLYEPTFVRDFPV-----ETSPLVKGHR----------------SKAGVV 494

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPP 535
            ++DL   GFE+A+G    +   V  + F          +            A   GMPP
Sbjct: 495 EKWDLYVRGFELATGYSELNDPVVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPP 554

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG+  GIDR+++ L GA  +RE   FP
Sbjct: 555 AGGMGMGIDRLLIALTGA-TIRETITFP 581


>gi|301051815|ref|YP_003790026.1| lysyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300373984|gb|ADK02888.1| lysyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 499

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 59/316 (18%), Positives = 124/316 (39%), Gaps = 21/316 (6%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G+    ++      V ++G +   R  G   F  I+D +G  Q+    D+   E  +  +
Sbjct: 49  GEFSKEELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +  +    G ++    +    N+  G++ + A    +L+ +   PLP           R+
Sbjct: 109 TADL----GDLVGIEGKVFKTNV--GELSVKATGFTLLTKSLR-PLPDKYHGLKDVEQRY 161

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL       +  V R++II  MR  +    ++E  TP++ A +    AR F+   
Sbjct: 162 RQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ 
Sbjct: 222 NALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYA 279

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPI 297
           +   I+   EN++  + ++     T+      I  +    R             D  NP+
Sbjct: 280 DYKYIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWTRLHMVDAIKEHSGADFWNPM 339

Query: 298 IMHNVTEHFVHSEFRV 313
            +    E        +
Sbjct: 340 SVEEARELAKEHNVEI 355



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +   +  E   I++  F+E   E+K I      +  P       K ND    
Sbjct: 345 RELAKEHNVEIKDTMEVGHIIN-EFFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDEDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E A+     +      + F      +E   +           A + GM
Sbjct: 403 FTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 463 PPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 499


>gi|332685807|ref|YP_004455581.1| lysyl-tRNA synthetase (class II) [Melissococcus plutonius ATCC
           35311]
 gi|332369816|dbj|BAK20772.1| lysyl-tRNA synthetase (class II) [Melissococcus plutonius ATCC
           35311]
          Length = 498

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 66/318 (20%), Positives = 131/318 (41%), Gaps = 32/318 (10%)

Query: 5   RTHSCGDL-------GVSDVGS---FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L          ++        ++G +   R  G + F +++D  G  Q+    
Sbjct: 40  RTHNSAELHKLFDDRTKEELNEMNLTASVAGRMITKRGKGKVGFANLQDRDGQIQLYVRK 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E     +   +    G     + + +     TG++ + A+KI +LS A   PLP 
Sbjct: 100 DEVGEEPYDLFKHADL----GDFFGVTGQIM--KTDTGEVTIKAKKITLLSKALR-PLPD 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +       +KR++II+ +R  + +  +IE  TP+L   +
Sbjct: 153 KYHGLTNIEQRYRQRYLDLISNKESFDRFIKRSQIISEIRRYLDSNGYIEVETPVLHNEA 212

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 213 GGAAARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP- 270

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283
           EF  +++  ++ +  D+++  E ++R V E+      ++           F R+   DAI
Sbjct: 271 EFTMMEVYTAYTDYRDVMDLTEGIIRNVAEKVLGKTDITYGGQPVDLGKAFKRVHMVDAI 330

Query: 284 RRYGTDKPDLRNPIIMHN 301
           +       D    + +  
Sbjct: 331 KE--QVGIDFWPKMTLDE 346



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
           K N+       +++L   G E A+     +        F      +E   +         
Sbjct: 398 KKNEQDPRFTDRFELFIVGKEFANAFTELNDPIDQRSRFEEQEKEREQGNDEAHGVDEDF 457

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             + + GMPP GG+  G+DR+VMLL  A ++R+V LFP
Sbjct: 458 LESLEYGMPPTGGLGIGMDRLVMLLTDAPSIRDVLLFP 495


>gi|225850960|ref|YP_002731194.1| lysyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225645229|gb|ACO03415.1| lysyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 579

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 64/331 (19%), Positives = 130/331 (39%), Gaps = 21/331 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F  I+D  G  Q+    D+   E          +   G ++
Sbjct: 140 EKVSVAGRIVSFRDQGKAAFGHIQDADGKIQIYFRRDTLGDEKYNEAME---ILDIGDIV 196

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDT 137
               E      +TG++ +  +  ++L+ +    LP          +R++ R++DL     
Sbjct: 197 GVEGELF--RTMTGELTVEVKDFKLLTKSLR-ALPEKWHGLKDVELRYRRRYVDLIANPK 253

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQ 196
             +    R + I S+R  + +E F+E  TPIL + +    AR F+          Y L  
Sbjct: 254 AREIFKIRYKAIKSLREFLESEGFMEVETPILQSVASGAMARPFITHHNALDIDMY-LRI 312

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y ++L+  GF+R +++   FR+E   +   P EF  ++   ++++ +D+++  E +
Sbjct: 313 APELYLKMLIVGGFNRVYELGRNFRNEGIDTTHNP-EFTMVEFYAAYMDYNDLMDLTERL 371

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +R +  +           L+I ++     +      LR    +   T      +   F  
Sbjct: 372 MRKILMDTVGK-------LKITWEGQELDFSKPFRRLRFFDALKEKT----GKDKEFFLD 420

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
                   +   IP      +    D++ E 
Sbjct: 421 EGKAREFAKEVGIPKAETLTHLKILDKLFEH 451



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 7/178 (3%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+     G   +F      AR   A+E+GI          I+D  F  + EE+       
Sbjct: 405 DALKEKTGKDKEFFLDEGKAR-EFAKEVGIPKAETLTHLKILDKLFEHFIEEDLVQPTFV 463

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
             F      +     +D   +   +++L+ N  EIA+     +  E   + F      K 
Sbjct: 464 IDFPKILSPLAKTHRDDPDLV--ERFELIVNKQEIANAYTELNDPEDQRERFLQQLKEKA 521

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             +            A + G+PP GG   GIDR+VM+L  + ++REV LFP  +   D
Sbjct: 522 AGDEEAMDIDENFLTALEYGLPPTGGEGIGIDRLVMMLTDSPSIREVILFPTLRPEKD 579


>gi|169335601|ref|ZP_02862794.1| hypothetical protein ANASTE_02016 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258339|gb|EDS72305.1| hypothetical protein ANASTE_02016 [Anaerofustis stercorihominis DSM
           17244]
          Length = 491

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 69/344 (20%), Positives = 135/344 (39%), Gaps = 25/344 (7%)

Query: 8   SCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
            C D+        G  V+L+G +   R  G + F D+ D  G  Q+    D    +    
Sbjct: 40  YCKDINEKFEEYEGKKVKLAGRLMSKRGQGKVGFYDLMDSSGRIQLFIKKDVVGEDEYAL 99

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +++  +    G ++    E        GQI +  +K+ +LS + +  LP          +
Sbjct: 100 IKAYDI----GDILGVDGEVF--KTQRGQISVRVEKVILLSKSIQ-VLPEKFHGLKDPEL 152

Query: 125 RFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV 182
           R++ R++DL  +   K++   R++I+  MR  M  E F+E  TP+L T +    AR F+ 
Sbjct: 153 RYRQRYVDLIMNPEVKDVFLMRSKIVKCMRDFMDGEGFVEVETPVLGTLAGGANARPFIT 212

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y +  A +   + L+  GFD+ ++I   FR+E   +   P EF  ++   +
Sbjct: 213 HHNTLDIPMY-MRIATELPLKRLVVGGFDKVYEIGRIFRNEGMDATHNP-EFTTMESYQA 270

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           + + +D++N  E +   +  +     +V      I      RR           + M ++
Sbjct: 271 YADFNDVMNMSEKMYEYIASKTLGTTSVEFGDNEISLKAPFRR-----------VKMVDL 319

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                  +F   + I       +   +  +   G     + + E
Sbjct: 320 ITEETGVDFDKITDIEVAREEAKKLNVVPEEEWGIGKIIEEVFE 363



 Score = 97.1 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 13/158 (8%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID---FAHNPFTMPQGGMESLKGN 472
           AR   A++L ++    +    I++   +E + E K I      H+P  +     + +  +
Sbjct: 337 AREE-AKKLNVVPEEEWGIGKIIE-EVFEEHCEAKLIQPTFVTHHPVEISPLAKKCMDDD 394

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRA 528
                   +++L   G E  +G    +      + F+     K    +           A
Sbjct: 395 ----RYTQRFELFIAGHEYCNGFSELNDPFDQRERFAAQMEKKATGDDEAHPYDTDFINA 450

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + G+PP GG+  G+DR+VMLL    ++R+V LFP  +
Sbjct: 451 LEVGLPPTGGVGFGVDRLVMLLTNQSSIRDVILFPTMK 488


>gi|290894520|ref|ZP_06557472.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290555921|gb|EFD89483.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 498

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 144/373 (38%), Gaps = 28/373 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +    V ++G +   R  G + F  I+D +   Q+    D+   +     +   +  I
Sbjct: 56  LEEDAIEVSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAIFKLADLGDI 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      +       TG++ + A +  +LS +   PLP           R++ R+LDL
Sbjct: 116 IGI------KGTIFRTNTGELSVKATEFTLLSKSLR-PLPDKYHGLKDVEQRYRQRYLDL 168

Query: 134 RRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +       V R++I+   R  M ++ F+E  TP+L T +    A+ F+          
Sbjct: 169 ITNEESQNRFVMRSKILKYTRDYMDSQGFLEVETPVLHTIAGGAAAKPFITHHNALDMEL 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D++N
Sbjct: 229 Y-LRIALELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMN 286

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +E ++  V ++ +              +     Y  D       I M +  + +V  +F
Sbjct: 287 LVEGLVSTVCKQVNG-----------TTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDF 335

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
              +         +   +P      +  +   +NE+  +  +  L    +     G+   
Sbjct: 336 WNVTSDEEARELAKKHDVPV---TEHMTYGHILNEFFETHVEEKLIQPTFVY---GHPVE 389

Query: 372 MGPVAKHLNIVNT 384
           + P+AK       
Sbjct: 390 ISPLAKKNKEDER 402



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E + EEK I          +    + K  +       +++L   G E A+     +  
Sbjct: 368 FFETHVEEKLIQPTFVYGHPVEISPLAKKNKEDERF-TDRFELFIVGREHANAFSELNDP 426

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +   G       A + G+PP GG+  G+DR+VMLL  A ++R
Sbjct: 427 IDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGVDRLVMLLTNAPSIR 486

Query: 558 EVSLFPMSQNF 568
           ++ LFP  ++ 
Sbjct: 487 DILLFPTMKHR 497


>gi|292557973|gb|ADE30974.1| Lysyl-tRNA synthetase, class-2 [Streptococcus suis GZ1]
          Length = 500

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 69/345 (20%), Positives = 132/345 (38%), Gaps = 17/345 (4%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   S  DL   ++G    ++G +   R  G   F  I+D  G  Q+    D    E  
Sbjct: 47  QYEDKSKEDL--EELGQTAIIAGRIMTKRGKGKAGFAHIQDREGQIQIYVRKDDVSEENY 104

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  +   +    G  +    +    N+  G++ + A+K+  LS A   PLP         
Sbjct: 105 EIFKKADL----GDFIGVEGDVFKTNV--GELSIHARKLTHLSKALR-PLPEKFHGLTDI 157

Query: 123 SIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             R++ R+LDL  +       V R++II+ +R  +    F+E  TP+L   +   A    
Sbjct: 158 ETRYRKRYLDLITNRESFDRFVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAARPF 217

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           +     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 218 ITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQ 276

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  DI++  E +++   +       V+     I   +  +R           I    
Sbjct: 277 AYADYQDIMDLTEGIIQHTAKAVVGDGPVTYQGTEIAIHEPFKRIHMVDA-----IKEQT 331

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
             + +    F   +K L+      V     + G    +F +   E
Sbjct: 332 GVDFWQEMSFEE-AKALAAEHKVPVEKHHTEVGQIINSFFEEYVE 375



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K ND       +++L     E  +     +     L+ F     +KE+ ++   G     
Sbjct: 396 KKNDEDPRFTDRFELFIMTKEYGNAFTELNDPIDQLERFEAQAKAKELGDDEATGVDYDY 455

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 456 IEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|291484658|dbj|BAI85733.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 431

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 86/321 (26%), Positives = 131/321 (40%), Gaps = 34/321 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVL 71
             VG  V +  WV   R  G I FL +RD  G  Q   V A  + + F+ AKSV  E  L
Sbjct: 11  KHVGEEVTIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEESIFQTAKSVTQETSL 70

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G+V       +         EL+   IE++  A + P+     +E+       +R L
Sbjct: 71  YIKGIVKEDERSPL-------GYELAVTDIEVIHEATDYPITP---KEHGTEFLMDHRHL 120

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR    H  +  R  II +       E F++   PILT S+PEG  +       ++ ++
Sbjct: 121 WLRSKRQHAIMKIRNEIIRATYEFFNNEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY 180

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L 
Sbjct: 181 --LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFEENLQ 237

Query: 252 TMENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRY---GTDKPDL 293
             EN +  + +       +  N               F RI YD+AI      G D  + 
Sbjct: 238 VQENYVSFIVQSVLKNCKIELNTLGRDTSKLEQIKAPFPRITYDEAIEFLKEKGFDDIEW 297

Query: 294 RNPIIMHNVTEHFVHSEFRVF 314
            +     + T    H +  VF
Sbjct: 298 GDDFGAPHETAIAEHYDKPVF 318



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 19/128 (14%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           D P +       +   +  PF M         +   DL++ + +         EI  G  
Sbjct: 314 DKPVF-----ITRYPTSLKPFYMQPASDREDVVLCADLIAPEGYG--------EIIGGSE 360

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  E++       G+      + +       + G  PH G   G++R V  + GA +V
Sbjct: 361 RIHDMELLESRLKEHGLD----SDAYKWYAELRKYGSVPHSGFGLGLERTVAWISGAPHV 416

Query: 557 REVSLFPM 564
           RE   FP 
Sbjct: 417 RETIPFPR 424


>gi|227499307|ref|ZP_03929419.1| possible lysine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227218658|gb|EEI83892.1| possible lysine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 632

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 75/355 (21%), Positives = 142/355 (40%), Gaps = 32/355 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FE 60
           R  + +  D   +  G  VR++G +   R HG + F+DI+D  G  Q+V   +     F 
Sbjct: 37  RIPSKNIKDDFEAYDGKNVRIAGRIMAKRGHGNMSFMDIQDESGQIQIVNRKNVIGDLFS 96

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K      ++ IDG V              G+I +   +  +L       LP       
Sbjct: 97  QVKKYDIGDIVGIDGKV---------FKTNQGEISIE-TETPLLMTKSLQMLPEKWHGLK 146

Query: 121 PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-AR 178
            + +R++ R+LDL  +   K++   R+ II+ +R  +  + F+E  TPIL   +    AR
Sbjct: 147 DQDLRYRQRYLDLIVNPEVKDVFVQRSLIISEIRRFLDGKGFLEVETPILNTIAGGATAR 206

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+          Y L  A + Y + L+  GFD+ ++I   FR+E   +   P EF  ++
Sbjct: 207 PFITHHNSLDIGMY-LRIASELYLKRLIVGGFDKVYEIGRMFRNEGMDATHNP-EFTTME 264

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +  ++ + +D++   E ++  V ++      V  +   I              +L+ P  
Sbjct: 265 LYQAYADFEDMMEITETMVEAVAQKVKGKTLVELDGNEI--------------ELKAPWK 310

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--DRMNEWARSQ 351
             ++ E         F++I       E+         G+R     +  +E+   +
Sbjct: 311 RISMIEAVKEYSGVDFNEITDYEAAVEIAKEKNVEVKGSRGEIIAEFFDEFVEDK 365


>gi|217965685|ref|YP_002351363.1| lysyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|217334955|gb|ACK40749.1| lysyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307569767|emb|CAR82946.1| lysyl-tRNA synthetase [Listeria monocytogenes L99]
          Length = 498

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 69/373 (18%), Positives = 144/373 (38%), Gaps = 28/373 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +    V ++G +   R  G + F  I+D +   Q+    D+   +     +   +  I
Sbjct: 56  LEEDAIEVSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKLADLGDI 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      +       TG++ + A +  +LS +   PLP           R++ R+LDL
Sbjct: 116 IGI------KGTIFRTNTGELSVKATEFTLLSKSLR-PLPDKYHGLKDVEQRYRQRYLDL 168

Query: 134 RRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +       V R++I+   R  M ++ F+E  TP+L T +    A+ F+          
Sbjct: 169 ITNEESQNRFVMRSKILKYTRDYMDSQGFLEVETPVLHTIAGGAAAKPFITHHNALDMEL 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G D+ ++I   FR+E   +   P EF  L+   ++ + +D++N
Sbjct: 229 Y-LRIALELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMN 286

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +E ++  V ++ +              +     Y  D       I M +  + +V  +F
Sbjct: 287 LVEGLVSTVCKQVNG-----------TTEITYGEYKVDLTPNWRRIHMADAVKEYVGVDF 335

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
              +         +   +P      +  +   +NE+  +  +  L    +     G+   
Sbjct: 336 WNVTSDEEARELAKKHDVPV---TEHMTYGHILNEFFETHVEEKLIQPTFVY---GHPVE 389

Query: 372 MGPVAKHLNIVNT 384
           + P+AK       
Sbjct: 390 ISPLAKKNKEDER 402



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E + EEK I          +    + K  +       +++L   G E A+     +  
Sbjct: 368 FFETHVEEKLIQPTFVYGHPVEISPLAKKNKEDERF-TDRFELFIVGREHANAFSELNDP 426

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +   G       A + G+PP GG+  G+DR+VMLL  A ++R
Sbjct: 427 IDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGVDRLVMLLTNAPSIR 486

Query: 558 EVSLFPMSQNF 568
           ++ LFP  ++ 
Sbjct: 487 DILLFPTMKHR 497


>gi|16079293|ref|NP_390117.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310152|ref|ZP_03591999.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221314474|ref|ZP_03596279.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221319396|ref|ZP_03600690.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221323672|ref|ZP_03604966.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|321311705|ref|YP_004203992.1| asparaginyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|1711642|sp|P39772|SYN_BACSU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|1146247|gb|AAB38455.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|2634654|emb|CAB14152.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|320017979|gb|ADV92965.1| asparaginyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 430

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 86/321 (26%), Positives = 131/321 (40%), Gaps = 34/321 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVL 71
             VG  V +  WV   R  G I FL +RD  G  Q   V A  + + F+ AKSV  E  L
Sbjct: 10  KHVGEEVTIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEESIFQTAKSVTQETSL 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G+V       +         EL+   IE++  A + P+     +E+       +R L
Sbjct: 70  YIKGIVKEDERSPL-------GYELAVTDIEVIHEATDYPITP---KEHGTEFLMDHRHL 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR    H  +  R  II +       E F++   PILT S+PEG  +       ++ ++
Sbjct: 120 WLRSKRQHAIMKIRNEIIRATYEFFNNEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY 179

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L 
Sbjct: 180 --LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFEENLQ 236

Query: 252 TMENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRY---GTDKPDL 293
             EN +  + +       +  N               F RI YD+AI      G D  + 
Sbjct: 237 VQENYVSFIVQSVLKNCKIELNTLGRDTSKLEQIKAPFPRITYDEAIEFLKEKGFDDIEW 296

Query: 294 RNPIIMHNVTEHFVHSEFRVF 314
            +     + T    H +  VF
Sbjct: 297 GDDFGAPHETAIAEHYDKPVF 317



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 19/128 (14%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           D P +       +   +  PF M         +   DL++ + +         EI  G  
Sbjct: 313 DKPVF-----ITRYPTSLKPFYMQPASDREDVVLCADLIAPEGYG--------EIIGGSE 359

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  E++       G+      + +       + G  PH G   G++R V  + GA +V
Sbjct: 360 RIHDMELLESRLKEHGLD----SDAYKWYAELRKYGSVPHSGFGLGLERTVAWISGAPHV 415

Query: 557 REVSLFPM 564
           RE   FP 
Sbjct: 416 RETIPFPR 423


>gi|322372640|ref|ZP_08047176.1| lysine--tRNA ligase [Streptococcus sp. C150]
 gi|321277682|gb|EFX54751.1| lysine--tRNA ligase [Streptococcus sp. C150]
          Length = 496

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 67/354 (18%), Positives = 134/354 (37%), Gaps = 27/354 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             ++     ++G +   R  G + F  I+D  G  Q+    
Sbjct: 37  RTATSGQLKEKYADKTKEELHEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E     +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYDIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  + A+ F+E  TP+L   +
Sbjct: 150 KFHGLSDVETIYRKRYLDLISNRDSFDRFVTRSKIISEIRRYLDAQGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI+N  E +++   +       ++     I  ++  +R        
Sbjct: 269 FTSIEVYQAYADFHDIMNLTEGIIQHAAKAVKGDGPINYQGTEIKINEPFKRIHMVDA-- 326

Query: 294 RNPIIMHNVTEHFVHSEFRV-FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                +  +T      +  +  +K ++      V     + G    AF +   E
Sbjct: 327 -----IKEITGVNFWQDMTLDEAKAIAAEKNVPVEKHYTEVGHIINAFFEEFVE 375



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K N        +++L     E  +     +     L  F     +KE+ ++   G     
Sbjct: 396 KKNPEDPRFTDRFELFIMTKEYGNAFTELNDPIDQLSRFEAQAAAKELGDDEATGIDYDY 455

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 456 VEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|89100492|ref|ZP_01173353.1| lysyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084758|gb|EAR63898.1| lysyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 496

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 137/354 (38%), Gaps = 27/354 (7%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R+H   DL           + +    V L+G +   R  G   F  I+D  G  Q+    
Sbjct: 36  RSHQSQDLIDEYGEQEKEAIEEQNISVTLAGRIMTKRGKGKAGFAHIQDLKGQIQIYVRQ 95

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +   S  +    G ++  +       +  G++ +  +  E+L+ +   PLP 
Sbjct: 96  DAIGEESYEIFNSADL----GDLVGVTGTLFKTKV--GELSIKVEAFELLTKSLR-PLPE 148

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                     R++ R+LDL      K   + R+RII SMR  + +  ++E  TP++ + +
Sbjct: 149 KFHGLKDVEQRYRQRYLDLIMSQESKKTFITRSRIIQSMRRYLDSHGYLEVETPMMHSIA 208

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 209 GGASARPFITHHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP- 266

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  DI++  EN++  + EE     TV      +       R       
Sbjct: 267 EFTMIELYEAYADYRDIMSLTENLVAHIAEEVLGTTTVQYGDYEVNLKPEWTRLHMVDA- 325

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
               I  H   + +        ++ L+     E+      G   N  F  ++ E
Sbjct: 326 ----IKEHTGVDFWKQMSKEE-AQALAKEHNVEIKETMEYGHIVNEFFEQKVEE 374



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 12/158 (7%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDL 474
             +A+E  +      E+  I++  F+E   EEK I       +P  +    +      D 
Sbjct: 344 QALAKEHNVEIKETMEYGHIVN-EFFEQKVEEKLIQPTFIYGHPVEISP--LAKKNEEDP 400

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++L     E A+     +      + F      +E   +           A +
Sbjct: 401 R--FTDRFELFIVAREHANAFTELNDPIDQRERFEAQLKEREQGNDEAHMMDDDFIEALE 458

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            GMPP GG+  GIDR+VMLL  + ++R+V LFP+ ++ 
Sbjct: 459 YGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLFPLMRHR 496


>gi|138893753|ref|YP_001124206.1| lysyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|134265266|gb|ABO65461.1| Lysyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 494

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 67/329 (20%), Positives = 124/329 (37%), Gaps = 23/329 (6%)

Query: 5   RTHSC-------GDLGVSDVGS---FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH         GDL   ++      V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 34  RTHKAEELFKLYGDLSKEELEEQQIEVAVAGRIMTKRGKGKAGFAHIQDVTGQIQIYVRQ 93

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    +  +  +   +  I G+               G++ +     E L+ A   PLP 
Sbjct: 94  DDVGEQQYELFKISDLGDIVGV------RGTMFKTKVGELSIKVSSYEFLTKALR-PLPE 146

Query: 115 FGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL       +  + R+ II SMR  + ++ ++E  TP++ A +
Sbjct: 147 KYHGLKDVEQRYRQRYLDLTMNPQSKQTFITRSLIIQSMRRYLDSQGYLEVETPMMHAIA 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+        + Y +  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 207 GGAAARPFITHHNALDMTLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP- 264

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L++  ++ +  DI+   EN++  +  E      +      +      RR       
Sbjct: 265 EFTMLELYEAYADFRDIMKLTENLIAHIATEVLGTTKIQYGEHTVDLTPEWRRLHMVDAI 324

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
                +  +   H    E R  +K   V 
Sbjct: 325 KEY--VGVDFWRHMDDEEARALAKEHGVE 351



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 6/154 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E G+       F  I++  F+E   E + I          +    + K  D    
Sbjct: 342 RALAKEHGVEIAPHMTFGHIVN-EFFEQKVESQLIQPTFIYGHPVEISPLAKKNPD-DPR 399

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
              +++L   G E A+     +      Q F      +E               A + GM
Sbjct: 400 FTDRFELFIVGREHANAFTELNDPIDQRQRFEAQLKEREQGNDEAHEMDEDFLEALEYGM 459

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  G+DR+VMLL  + ++R+V LFP  ++
Sbjct: 460 PPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMRH 493


>gi|315638751|ref|ZP_07893924.1| lysine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481160|gb|EFU71791.1| lysine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 502

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 105/551 (19%), Positives = 187/551 (33%), Gaps = 122/551 (22%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V  +R  G  IF +I D     Q+  + DS   E     +    +   G ++  
Sbjct: 58  VSIAGRVKLLRIAGKSIFANIEDESENVQIYFSKDSIGEEQFNLFKKNLEV---GDIILA 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLH 139
                   +  G+  L   ++ IL+    +PLP           R++ R++D+  +  + 
Sbjct: 115 KGYPFLTKM--GEFSLHISEL-ILATKSIVPLPEKFHGLTDIEQRYRKRYVDMIMNADVR 171

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           K+   R++I++ +R     + F+E  TP++   +        V      G    L  AP+
Sbjct: 172 KDFFTRSKIVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNALGVERFLRIAPE 231

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + L+  GF+  F+I  CFR+E                          ++   N    
Sbjct: 232 LHLKRLIVGGFEAVFEINRCFRNEG-------------------------MDLTHN---- 262

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
                         F  I +      Y            + ++TE             L 
Sbjct: 263 ------------PEFTTIEFYWTYHNYRD----------LMDLTEELF---------ALL 291

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
           +        I          F D++ ++++          F R+     +   G + K L
Sbjct: 292 LKELNLETKI---------TFDDKIIDFSKP---------FERISYKEALKKYGNLDKEL 333

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
            I N E I  +L         F A + L         +  +      +        +I+D
Sbjct: 334 -IENKEQILNKLKND-----GFEANEKL----DLGHLQAELFDHY--VEDKLINPTFIID 381

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           FP             + +P +      E++         A +++L   G EIA+G    +
Sbjct: 382 FP------------ISISPLSRRSEKDENI---------AERFELFIAGKEIANGFNELN 420

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F     +K   +            A   GMPP  G   GIDR+VMLL G K+
Sbjct: 421 DPLDQYERFLKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGEGIGIDRLVMLLTGKKS 480

Query: 556 VREVSLFPMSQ 566
           +R+V LFP  +
Sbjct: 481 IRDVILFPAMR 491


>gi|296090191|emb|CBI40010.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 94/613 (15%), Positives = 189/613 (30%), Gaps = 137/613 (22%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           + +Y   S GD  + DV   V L+G +   R     + F D+       QV+A+  S+  
Sbjct: 168 IKKYGALSNGD-HLEDV--TVSLAGRIMSKRSSSSKLFFYDLHGDGAKVQVMADARSSDM 224

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF---- 115
           + A+  R    +    +V              G++ +  +   +LS    +         
Sbjct: 225 DEAEFSRFHSGVKRGDIV---GVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAGPG 281

Query: 116 ------GEREY---------------PESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMR 153
                  + +                 +  R++ R+LDL  +  + +    R +II+ +R
Sbjct: 282 SDNANVKKTDVWVPGSTRNPETYILKDQETRYRQRYLDLMLNMEVRQIFKTRAKIISYIR 341

Query: 154 CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
             +   +F+E  TP++   +   A    V    +      +  AP+ Y + L+  G DR 
Sbjct: 342 SFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKLYMRIAPELYLKELVVGGLDRV 401

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           ++I   FR+E                          ++   N                  
Sbjct: 402 YEIGKQFRNEG-------------------------IDLTHN----------------PE 420

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           F    +  A   Y     +L   ++   V E     + +  +  L  +P    +  P + 
Sbjct: 421 FTTCEFYMAFADYNDVM-ELTEKMLSGMVKELTGGYKIKYHANGLDKDPIEIDFTPPFR- 478

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
                   + + + A                          + K L+        V   +
Sbjct: 479 ---RIDMIEDLEKMADL-----------------------SIPKDLSSDEANKYLVDACL 512

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
           +           P            H  +E  +         +I +              
Sbjct: 513 K----FDIKCPPPQTTARLLDKLVGHFLEETCV------NPTFITN-------------- 548

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
              +P  M                   +++L  N  E+ +     +   V  Q F+    
Sbjct: 549 ---HPEIMSPLAKWHRS----KQSLTERFELFVNKHELCNAYTELNDPVVQRQRFAEQLK 601

Query: 514 SKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            ++  ++           A + G+PP GG   GIDR+ M+L  ++N++EV LFP  +   
Sbjct: 602 DRQSGDDEAMALDETFCMALEYGLPPTGGWGLGIDRLTMMLTDSQNIKEVLLFPAMKPQD 661

Query: 570 DLLMGSPSTVSVE 582
           +  +  P+ +S +
Sbjct: 662 EPSVQPPAELSSQ 674


>gi|257440518|ref|ZP_05616273.1| lysine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257197022|gb|EEU95306.1| lysine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 503

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 66/308 (21%), Positives = 128/308 (41%), Gaps = 21/308 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             +D G  V L+G +   R  G   F  +RD  G  Q+    D    E   + +   V  
Sbjct: 59  NETDSGKQVALAGRMMSKRVMGKASFAHLRDDKGDIQLYVRRDELGEEAYAAFKKLDVGD 118

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G+      +       TG++ + A ++ +L+ +   PLP          +R++ R++D
Sbjct: 119 IIGV------KGEVFRTKTGELSVRATELTLLAKSLR-PLPEKFHGLTDTEMRYRQRYVD 171

Query: 133 LR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L     +    VKR++I+  +R  +  + F+E  TPILT       AR F          
Sbjct: 172 LIANPEVKDTFVKRSQILKEIRAYLDEKGFLEVDTPILTPFEIGASARPFYTHHNSLNMD 231

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L    + Y + L+  G DR +++   FR+E       P EF  +++  +F +   ++
Sbjct: 232 M-VLRIETELYLKRLIVGGMDRVYEVGRIFRNEGMDPKHNP-EFTSIELYQAFTDFHGMM 289

Query: 251 NTMENVLRGVFEEFSNGNTVSN--------NFLRICYDDAIRRY-GTDKPDLR-NPIIMH 300
           + +E + + +  +      +          ++ R+   +A+++Y G D  D + +   + 
Sbjct: 290 DLVEELYKRLALKICGSMVIPYQGKQIDMSHWERLTMVEAVKKYSGVDFNDWKSDEDAIA 349

Query: 301 NVTEHFVH 308
           +  EH V 
Sbjct: 350 SAKEHHVE 357



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 5/123 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML--- 505
           E K+      +  P       K          +++   +  E  +     +         
Sbjct: 377 EDKLIQPTFIYDYPVEISPLAKRKPDDPAFTERFEYFIDCTEYGNAFSELNDPIDQKGRF 436

Query: 506 --QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             Q      I  +           A + G+PP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 437 ERQVAERKAIEPDCKAQVDYDYVNALEYGLPPTGGLGFGVDRLVMLLTDSASIRDVLLFP 496

Query: 564 MSQ 566
             +
Sbjct: 497 TMK 499


>gi|146318173|ref|YP_001197885.1| lysyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146320358|ref|YP_001200069.1| lysyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253751355|ref|YP_003024496.1| lysyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253753256|ref|YP_003026396.1| lysyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253755149|ref|YP_003028289.1| lysyl-tRNA synthetase [Streptococcus suis BM407]
 gi|166230593|sp|A4VZY0|SYK_STRS2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166230595|sp|A4VTP6|SYK_STRSY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|145688979|gb|ABP89485.1| Lysyl-tRNA synthetase (class II) [Streptococcus suis 05ZYH33]
 gi|145691164|gb|ABP91669.1| Lysyl-tRNA synthetase (class II) [Streptococcus suis 98HAH33]
 gi|251815644|emb|CAZ51232.1| lysyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251817613|emb|CAZ55360.1| lysyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251819501|emb|CAR45058.1| lysyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|319757641|gb|ADV69583.1| lysyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 496

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 69/345 (20%), Positives = 132/345 (38%), Gaps = 17/345 (4%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   S  DL   ++G    ++G +   R  G   F  I+D  G  Q+    D    E  
Sbjct: 47  QYEDKSKEDL--EELGQTAIIAGRIMTKRGKGKAGFAHIQDREGQIQIYVRKDDVSEENY 104

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  +   +    G  +    +    N+  G++ + A+K+  LS A   PLP         
Sbjct: 105 EIFKKADL----GDFIGVEGDVFKTNV--GELSIHARKLTHLSKALR-PLPEKFHGLTDI 157

Query: 123 SIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             R++ R+LDL  +       V R++II+ +R  +    F+E  TP+L   +   A    
Sbjct: 158 ETRYRKRYLDLITNRESFDRFVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAARPF 217

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           +     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 218 ITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQ 276

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  DI++  E +++   +       V+     I   +  +R           I    
Sbjct: 277 AYADYQDIMDLTEGIIQHTAKAVVGDGPVTYQGTEIAIHEPFKRIHMVDA-----IKEQT 331

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
             + +    F   +K L+      V     + G    +F +   E
Sbjct: 332 GVDFWQEMSFEE-AKALAAEHKVPVEKHHTEVGQIINSFFEEYVE 375



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K ND       +++L     E  +     +     L+ F     +KE+ ++   G     
Sbjct: 396 KKNDEDPRFTDRFELFIMTKEYGNAFTELNDPIDQLERFEAQAKAKELGDDEATGVDYDY 455

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 456 IEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|71908461|ref|YP_286048.1| lysyl-tRNA synthetase, class-2 [Dechloromonas aromatica RCB]
 gi|123733161|sp|Q47C53|SYK_DECAR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71848082|gb|AAZ47578.1| Lysyl-tRNA synthetase, class-2 [Dechloromonas aromatica RCB]
          Length = 501

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 62/284 (21%), Positives = 118/284 (41%), Gaps = 20/284 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+++G +   R  G   F  I+D  G  Q+    D    E+    ++  +  I G+   
Sbjct: 66  EVKVAGRLMLKRVMGKASFATIQDLSGRIQIYITRDRVGEEVYADFKTWDLGDIIGV--- 122

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                      TG++ + A +I +L+ +   PLP        + ++++ R++DL  +   
Sbjct: 123 ---TGSLMKTKTGELSIQAAEIRLLTKSLR-PLPDKFHGLADQEMKYRQRYVDLIMNEET 178

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
           +   + R+ I+ S+R  M    F+E  TP++        A+ F+          + L  A
Sbjct: 179 RFTFRARSAIVASIRNYMTGHGFMEVETPMMHPIPGGASAKPFVTHHNALDMQQF-LRIA 237

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF++ F+I   FR+E   S R   EF  ++   ++     +++  E +L
Sbjct: 238 PELYLKRLVVGGFEKVFEINRNFRNEGL-SPRHNPEFTMMEFYEAYANYHTLMDFTEGLL 296

Query: 258 RGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
           R    E                S  F R+  + AI+R   +  D
Sbjct: 297 RHAAREALGKEVFVYQGRELDLSKPFHRLTINQAIQRQHPEFSD 340



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 25/143 (17%)

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             +C+E  +I+D+P                            + +D       +++L   
Sbjct: 378 EAHCWEPTFIIDYP---------------------VEVSPLARASDTNPEITERFELFIV 416

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGI 543
           G EIA+G    + +E     F     +K+  +           RA + G+PP GG   GI
Sbjct: 417 GREIANGFSELNDAEDQAARFQEQMKAKDAGDEEAMYYDADFIRALEYGLPPTGGCGIGI 476

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR++MLL  A  +R+V LFP  +
Sbjct: 477 DRLIMLLTDAAAIRDVILFPSMR 499


>gi|311068749|ref|YP_003973672.1| asparaginyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310869266|gb|ADP32741.1| asparaginyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 430

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 85/321 (26%), Positives = 129/321 (40%), Gaps = 34/321 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVL 71
             VG  V +  WV   R  G I FL +RD  G  Q   V A  D   F+ AKSV  E  L
Sbjct: 10  KHVGQEVTIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVDETIFQTAKSVTQETSL 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G+V       +         EL+   IE++  A + P+     +E+       +R L
Sbjct: 70  YVKGIVKEDERSPL-------GFELAVTSIEVIHEATDYPITP---KEHGTEFLMDHRHL 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR    H  +  R  II +       E F++   PILT S+PEG  +       ++ ++
Sbjct: 120 WLRSKRQHAIMKIRNEIIRATYEFFNNEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY 179

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L 
Sbjct: 180 --LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFNENLE 236

Query: 252 TMENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRY---GTDKPDL 293
             EN +  V +       +  N               F RI YD+A+      G D  + 
Sbjct: 237 VQENYVSFVVQSVLENCKIELNTLGRDTSKLEQIKAPFPRITYDEALAFLKEKGFDDIEW 296

Query: 294 RNPIIMHNVTEHFVHSEFRVF 314
            +     + T      +  VF
Sbjct: 297 GDDFGAPHETAIAESYDKPVF 317



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 26/140 (18%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDL 484
           I  +  +  +I  +P             +  PF M         +   DL++ + +    
Sbjct: 308 IAESYDKPVFITHYP------------TSLKPFYMQPAEDREDVVLCADLIAPEGYG--- 352

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
                EI  G  R H  E++       G+      + +       + G  PH G   G++
Sbjct: 353 -----EIIGGSERIHDMELLEARLKEHGLE----SDAYKWYAELRKYGSVPHSGFGLGLE 403

Query: 545 RIVMLLLGAKNVREVSLFPM 564
           R V  + GA +VRE   FP 
Sbjct: 404 RTVAWISGAPHVRETIPFPR 423


>gi|299144546|ref|ZP_07037625.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298517634|gb|EFI41374.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 500

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 70/333 (21%), Positives = 132/333 (39%), Gaps = 27/333 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDG 75
           G  V ++G +   R HG I FLD++D  G  Q+ A  D     +E  K      ++ ++G
Sbjct: 54  GKKVSIAGRIMSKRRHGKIAFLDVQDKLGRIQIFARKDVLLDNYEDIKGYDMGDIIGVEG 113

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V    A         G+I + A+   +LS + ++ LP          +R++ R++DL  
Sbjct: 114 EVFKTEA---------GEISVRAESTLLLSKSLQI-LPEKFHGLKDPDLRYRQRYVDLIV 163

Query: 136 DTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193
           +   K+  +KRT+I+ S+R  + + +F+E  TPIL T +    AR FL            
Sbjct: 164 NPEIKDVFIKRTKILKSIRNYLDSRDFLEVETPILATVAGGANARPFLTHHNTLDMDM-Q 222

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  A + + + L+  G DR +++   FR+E   +   P EF  +++  ++ + +D++   
Sbjct: 223 MRIANELFLKRLIVGGMDRVYEMGKMFRNEGMDTRHNP-EFTNIEVYQAYADYEDMMRLT 281

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           E +      E      ++     I      +R           I M +        +F  
Sbjct: 282 EGIFENAAMEVYGTTKITYQGTEIDLKAPWKR-----------ITMIDAINEATGVDFNK 330

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                      +   +  +           M E
Sbjct: 331 IDSDEEAQKIAKAKGLEIESDWTRGKIISEMFE 363



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 57/154 (37%), Gaps = 8/154 (5%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG-MESLKGNDLLS 476
             IA+  G+   + +    I+    +E   E   I          +   +      D   
Sbjct: 338 QKIAKAKGLEIESDWTRGKIIS-EMFEEFCEASLIQPTFVLKHPVEVSPLAKRSAEDPR- 395

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++   N +E A+     +      + F      KE  ++           A + G
Sbjct: 396 -LTDRFEAFINTWEFANAFSELNDPIDQRERFEEQVREKEAGDDEAHPMDYDFVNALEVG 454

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +PP GG+  G+DR+VMLL    ++R+V  FP  +
Sbjct: 455 LPPTGGLGIGVDRMVMLLTDQPSIRDVVFFPTMK 488


>gi|254497461|ref|ZP_05110254.1| lysine tRNA synthetase, heat inducible [Legionella drancourtii
           LLAP12]
 gi|254353276|gb|EET12018.1| lysine tRNA synthetase, heat inducible [Legionella drancourtii
           LLAP12]
          Length = 497

 Score =  204 bits (520), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 68/305 (22%), Positives = 129/305 (42%), Gaps = 31/305 (10%)

Query: 5   RTHSCGDLGVS--DVGSFV--------RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H   DL  +  ++G            ++G +   R  G   F  I+D  G  Q+    
Sbjct: 38  REHLAADLLKAYAELGKETLAQQQVKASVAGRIVLRRIMGKASFFHIQDVSGRIQIYIRA 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           +    E+ +  +   +    G ++  S E    N  TG++ L+A+ IE+L+ +   PLP 
Sbjct: 98  NDLP-ELYEQFKHWDL----GDIVGVSGELFKTN--TGELTLNAEHIELLTKSLR-PLPD 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASS 173
                  + ++++ R++DL  +   +     R+R+I + R  M    F+E  TP++    
Sbjct: 150 KFHGLADQEVKYRKRYVDLIANEDSRTTFLIRSRLIQAFRQFMDKNQFLEVETPMMHPIP 209

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+        + Y L  AP+ Y + L+  GF+R ++I   FR+E   +   P 
Sbjct: 210 GGAVARPFITHHNSLDMTMY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGISTRHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283
           EF  ++   ++ + +D++   E +L+ + +       V            F R+   +AI
Sbjct: 268 EFTMVEFYQAYADYNDLMTFTEQLLQYLCDVVLGTRQVEYQGQSIDFNQPFTRMTVKEAI 327

Query: 284 RRYGT 288
             Y  
Sbjct: 328 LHYHP 332



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 7/127 (5%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
            +E   E +         T     +  L + +D       +++    G EIA+G    + 
Sbjct: 369 LFEETVEHQLFQPTF--ITAYPTEISPLARRSDSDPEVTDRFEFFIAGREIANGFSELND 426

Query: 501 SEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           +E   + F      K+       +       A + G+PP  G   GIDR+VML   ++++
Sbjct: 427 AEDQAERFRKQVEEKDAGDLEAMHYDSDYIEALEYGLPPTAGEGIGIDRLVMLFTNSQSI 486

Query: 557 REVSLFP 563
           R+V LFP
Sbjct: 487 RDVILFP 493


>gi|285018128|ref|YP_003375839.1| lysine-tRNA ligase (lysyl-tRNA synthetase) protein [Xanthomonas
           albilineans GPE PC73]
 gi|283473346|emb|CBA15851.1| probable lysine-trna ligase (lysyl-trna synthetase) protein
           [Xanthomonas albilineans]
          Length = 505

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 66/278 (23%), Positives = 122/278 (43%), Gaps = 16/278 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75
           G  +RL+G +   R  G   F+ ++D  G  Q+   AN   A ++  K      ++ ++G
Sbjct: 67  GRSLRLAGRLLAKRVMGKASFVQLQDESGRIQLYLQANALGAAYDAFKGWDIGDIIAVEG 126

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR- 134
            +             TG++ + A  + +L+ A   PLP           R++ R++DL  
Sbjct: 127 GL---------TRTKTGELSIKATALRLLTKALR-PLPDKWHGLSDVEQRYRQRYVDLIV 176

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYA 193
                   VKR++II +MR  + A  F+E  TP++        A+ F           Y 
Sbjct: 177 SPEARAVFVKRSKIIRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLY- 235

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  G +R ++I   FR+E   +   P EF  +++  ++    ++++  
Sbjct: 236 LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTRHNP-EFTMMELYEAYATYHEVMDLT 294

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           E+V+R V  +      V  + + I    A RR+  D+ 
Sbjct: 295 ESVIRDVARDVLGTTQVHWDGVDIDLGPAFRRWRMDEA 332



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           + +D       +++L  NG EIA+G    +  E     F     +KE  ++         
Sbjct: 402 RSSDTEPGYTDRFELFINGKEIANGFSELNDPEDQAARFQAQVAAKEGGDDEAMHFDADY 461

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + G+PP GG+  GIDR+VMLL G+ ++R+V LFP
Sbjct: 462 IRALEVGLPPTGGLGIGIDRLVMLLTGSASIRDVLLFP 499


>gi|164686646|ref|ZP_02210674.1| hypothetical protein CLOBAR_00239 [Clostridium bartlettii DSM
           16795]
 gi|164604375|gb|EDQ97840.1| hypothetical protein CLOBAR_00239 [Clostridium bartlettii DSM
           16795]
          Length = 507

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 63/297 (21%), Positives = 122/297 (41%), Gaps = 21/297 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            +  G  V+++G +   R  G   F+DI+D  G  Q     D+   E     ++  +  I
Sbjct: 56  EAKEGENVKIAGRIMSKRIQGKAGFIDIQDSEGRIQCYVRKDAIGEEEYPVFKTYDIGDI 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      E         +I + A  + +LS + +  LP          +R++ R++DL
Sbjct: 116 IGV------EGTVFKTKKEEISVKATSVVLLSKSLQ-VLPEKYHGLKDVDLRYRQRYVDL 168

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +   K     RT+ + ++R  +    F+E  TPIL T +    AR F+          
Sbjct: 169 IVNPEVKQAFLTRTKALKALRSYLDDRGFLEVETPILNTIAGGANARPFITHHNTLDIPM 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + Y + L+  GFD+ +++   FR+E    +  P E+  ++M  ++ + +D++ 
Sbjct: 229 Y-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDVNHNP-EYTAIEMYQAYADFNDMME 286

Query: 252 TMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY-GTDKPDLRNPII 298
             ENV+  + E  +                 + R+   + ++ Y G D   +     
Sbjct: 287 LTENVIAHMAEVATGSTVVNFQGTEIDFKPPWKRMTMIECVKEYSGVDFDTIETDEE 343



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 11/132 (8%)

Query: 442 FYEWNEEEKKIDFA---HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   E+K I      H+P  +    +      D       +++   N +E+A+     
Sbjct: 368 FFEEFGEDKLIQPTFITHHPVEVSP--LAKRNAEDPRK--TDRFEAFANKWELANAFSEL 423

Query: 499 HMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      + F +    KE+ ++           A + G+PP GG+  GIDR++MLL  + 
Sbjct: 424 NDPIDQKERFMDQLRKKELGDDEACDMDEDFINALEVGLPPTGGLGIGIDRVMMLLTNSA 483

Query: 555 NVREVSLFPMSQ 566
           ++R+V LFP  +
Sbjct: 484 SIRDVILFPTMK 495


>gi|57506076|ref|ZP_00371999.1| lysyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57015684|gb|EAL52475.1| lysyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 502

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 104/551 (18%), Positives = 188/551 (34%), Gaps = 122/551 (22%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V  +R  G  IF +I D     Q+  + DS   E     +    +   G ++  
Sbjct: 58  VSIAGRVKLLRIAGKSIFANIEDESENVQIYFSKDSIGEEQFNLFKKNLEV---GDIILA 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLH 139
                   +  G+  L   K+ + + +  +PLP           R++ R++D+  +  + 
Sbjct: 115 KGYPFLTKM--GEFSLHISKLTLATKS-IVPLPEKFHGLTDIEQRYRKRYVDMIMNADVR 171

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           K+   R++I++ +R     + F+E  TP++   +        V      G    L  AP+
Sbjct: 172 KDFFTRSKIVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNALGVERFLRIAPE 231

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + L+  GF+  F+I  CFR+E                          ++   N    
Sbjct: 232 LHLKRLIVGGFEAVFEINRCFRNEG-------------------------MDLTHN---- 262

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
                         F  I +  A   Y            + ++TE             L 
Sbjct: 263 ------------PEFTTIEFYWAYHNYND----------LMDLTEELF---------ALL 291

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
           +        I          F D++ +++R          F R+     +   G ++K +
Sbjct: 292 LKELNLETKI---------TFDDKIIDFSRP---------FERISYKEALEKYGNLSKEI 333

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
            I N E I  +L         F A + L         +  +      +        +I+D
Sbjct: 334 -IENKEQILNKLKSD-----GFEANEKL----DLGHLQAELFD--NYVEDKLINPTFIID 381

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           FP             + +P +      E++         A +++L   G EIA+G    +
Sbjct: 382 FP------------ISISPLSRRSEKDENI---------AERFELFIAGREIANGFNELN 420

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F     +K   +            A   GMPP  G   GIDR+VMLL   K+
Sbjct: 421 DPLDQYERFLKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGEGIGIDRLVMLLTEKKS 480

Query: 556 VREVSLFPMSQ 566
           +R+V LFP  +
Sbjct: 481 IRDVILFPAMR 491


>gi|312898248|ref|ZP_07757639.1| lysyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620745|gb|EFQ04314.1| lysyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 502

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 75/336 (22%), Positives = 144/336 (42%), Gaps = 34/336 (10%)

Query: 6   THSCGDLG-----VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SA 57
           TH   D+      +   G+ V L+G +  +R HG   F  +RD  G  Q+    D    A
Sbjct: 46  THHAQDIKDRAEALEKDGTTVSLAGRLMALRRHGKTAFCVLRDISGEVQLYFRKDVVGEA 105

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            +E+ K +    ++ ++G V             TG+  +      +LS +   PLP    
Sbjct: 106 SYELFKLLDIGDIVGVEGDV---------FTTHTGETTVRVVTWTLLSKSLR-PLPEKFH 155

Query: 118 REYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
               +  R++ R+LDL  +   KN  + R+RII  +R  + A NF+E  TP+L   +   
Sbjct: 156 GLTDKETRYRQRYLDLIVNPEVKNTFIMRSRIIKGIREYLDARNFLEVETPMLHNIAGGA 215

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+          + L  AP+ + + L+  G +R +++  CFR+E   +   P EF 
Sbjct: 216 AARPFVTHHNALDMDIF-LRIAPELHLKRLLVGGLERVYEMNRCFRNEGIDTRHNP-EFT 273

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY 286
            +++  +F + +D++   E ++  +  +      ++           + R+   +A+ +Y
Sbjct: 274 TVELYQAFGDLEDVIRITEELVSELALKLYGTTKITYIDKEIELAAPWNRMTMIEAVEKY 333

Query: 287 -GTDKPDLRNPIIMHNVTE--HFVHSEFRVFSKILS 319
            G D   +        + +  H  + E+    KI++
Sbjct: 334 TGKDFSKVETVEEARKIADELHVEYGEYDGIGKIIN 369



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 7/129 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL-SIKAFQYDLVCNGFEIASGGIRNHMS 501
           +E   EE  I       T     +  L   D    +   +++    G E+A+G    +  
Sbjct: 372 FEDYVEENLIQPTV--ITGHPLEISPLTKQDASNPLLTHRFEAFIYGRELANGFSELNDP 429

Query: 502 EVML----QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                   +         +          RA + GMPP GG+  GIDR+VM L  + ++R
Sbjct: 430 LDQRDRFIKQMEERAHGDDEAHQMDEDYCRALEYGMPPAGGLGIGIDRLVMFLTNSPSIR 489

Query: 558 EVSLFPMSQ 566
           +V LFP+S+
Sbjct: 490 DVLLFPLSR 498


>gi|288931892|ref|YP_003435952.1| aspartyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894140|gb|ADC65677.1| aspartyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 429

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 96/358 (26%), Positives = 154/358 (43%), Gaps = 35/358 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRS 67
           ++   D G  V L GW+H VR  GG++F+ +RD  G  Q+           FE AK+VR 
Sbjct: 7   EISEEDFGKKVTLYGWIHEVRDLGGLVFVVLRDREGFAQITLPKKKVKQEVFERAKNVRR 66

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRF 126
           E V       +    E           E+  ++ E+L+ A+  LPL V  +       R 
Sbjct: 67  ESV-------VKVVGEVKKEERAPNGFEIIPEEFEVLNEADAPLPLDVTEKVPAELDTRL 119

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            +RFLDLR+  +      R+ ++N+ R       FIE +TP + +++ EG  +    +  
Sbjct: 120 DHRFLDLRKHRVFAIFRVRSEVLNATREFFHERGFIEVNTPKIVSTATEGGTELFPITYF 179

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            + +F  L Q+PQ YKQ LMA+GFDR F+I P FR E+  + R   E   +D+E+SF + 
Sbjct: 180 EREAF--LNQSPQLYKQTLMAAGFDRVFEIGPIFRAEEHNTVRHLNEATSIDIEVSFTDH 237

Query: 247 DDILNTMENVLRGVFEEF------------SNGNTVSNNFLRICYDDAIRRYGTDK---- 290
           + ++  +E ++  + E                       F RI YD+A+      +    
Sbjct: 238 NGVMKYLEELIVYIHERVVENCEKYLNWLNVKLEVPEKPFERITYDEALEIVSRKEEIPW 297

Query: 291 -PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
             D   P +   + EH     + +        P Y   A+P +         D M  W
Sbjct: 298 GEDFSTPALKV-LAEHMQGY-YFITDWPTESKPFY---AMPYENRKEICKSFDLMKGW 350



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 24/145 (16%)

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L ++  +   + +I D+P      E K       PF                      +D
Sbjct: 306 LKVLAEHMQGYYFITDWP-----TESK-------PFYAMPYEN--------RKEICKSFD 345

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+    E+ASG  R H  +++++     G+        FG    AF+ GMPPH G   G+
Sbjct: 346 LMKGWLELASGAQRIHKYDLLVERIKAQGLDP----ESFGFYLEAFRYGMPPHAGWGLGV 401

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNF 568
           +R++M +L  KN+RE  LFP  +  
Sbjct: 402 ERLLMAMLDLKNIREAVLFPRDRQR 426


>gi|325525096|gb|EGD02989.1| lysyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 508

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 65/308 (21%), Positives = 119/308 (38%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   +L      S           V ++G +   R  G   F  ++D  G  Q    P+
Sbjct: 43  THHAAELQAKFAESDKEALEANPFEVAIAGRMMLKRVMGKASFATVQDGSGQIQFFVTPN 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +LS A   PLP  
Sbjct: 103 DVGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVKCTELRLLSKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + +R++ R++DL            RT+ I S+R  M   +F+E  TP+L     
Sbjct: 156 FHGLADQEMRYRQRYVDLIVTPETRDTFRARTKAIASIRKFMGDADFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T+            F R+    AI+
Sbjct: 274 FTMMEFYAAYTDYRWLMDFTEQLIRQTAIDALGTATIQYQGRELDLAKPFHRLTITQAIQ 333

Query: 285 RYGTDKPD 292
           ++     D
Sbjct: 334 KFAPQYTD 341



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 60/163 (36%), Gaps = 27/163 (16%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
            P    +     +  + +E        +E  +I+D+P                       
Sbjct: 363 QPAFLNAGIGALQLALFEE--TAEAQLWEPTFIIDYP---------------------VE 399

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                + +D +     +++L   G EIA+G    +  E     F      K+  +     
Sbjct: 400 VSPLARASDTVPGITERFELFMTGREIANGFSELNDPEDQAARFRKQVEQKDAGDEEAMF 459

Query: 525 ----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 RA + GMPP GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 460 FDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|83748478|ref|ZP_00945500.1| Lysyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|83724889|gb|EAP72045.1| Lysyl-tRNA synthetase [Ralstonia solanacearum UW551]
          Length = 510

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 64/307 (20%), Positives = 117/307 (38%), Gaps = 30/307 (9%)

Query: 7   HSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           H   DL                  V ++G +   R  G   F  ++D  G  Q     D 
Sbjct: 46  HHAADLHTRYSETDQPALEAANVEVAIAGRMMLKRVMGKASFATVQDGSGQIQFYITRDR 105

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E+  + +   +  I       +A  +      G++ +  Q++ +LS +   PLP   
Sbjct: 106 VGEEVYAAFKHWDLGDI------IAARGVLFRTNKGELSVQVQELRLLSKSLR-PLPDKF 158

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
                + ++++ R++DL            RT+ I S+R  M    F+E  TP+L      
Sbjct: 159 HGLADQEMKYRQRYVDLIVSPETRNTFRARTKAIASLRRHMGDAGFMEVETPMLHPIPGG 218

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             A+ F+          + L  AP+ Y + L+  GF+R ++I   FR+E   S R   EF
Sbjct: 219 AAAKPFITHHNALDMQMF-LRIAPELYLKRLIVGGFERVYEINRNFRNEGV-SPRHNPEF 276

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEE-----FSNGNTVS----NNFLRICYDDAIRR 285
             ++   ++ +   +++  EN++R    +       N           F R+    AI++
Sbjct: 277 TMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSAVLNYQGRELDLSKPFHRLTIAQAIQK 336

Query: 286 YGTDKPD 292
           Y     D
Sbjct: 337 YAPQYTD 343



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +        P       + +D  +    +++L   G EIA+G    +  
Sbjct: 380 LFEETAESQLWEPT-FIIDYPVEVSPLARASDTRASITERFELFITGREIANGFSELNDP 438

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   + F      K+  +           RA + GMPP GG   GIDR+VMLL  + N+R
Sbjct: 439 EDQAERFRKQVEQKDAGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIR 498

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 499 DVILFP 504


>gi|297539160|ref|YP_003674929.1| lysyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297258507|gb|ADI30352.1| lysyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 514

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 122/310 (39%), Gaps = 35/310 (11%)

Query: 7   HSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYG-----ITQVV 51
           H   DL  +               V ++G +   R  G   F  I+D  G       Q+ 
Sbjct: 49  HKAADLIAAYANQENEAFEATPVNVVVAGRMMLKRVMGKASFATIQDGSGANAGSRIQLY 108

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              D    E+ +  +   +    G      A        TG++ +   +I +L+ +   P
Sbjct: 109 VAKDMISEEVYEQFKHWDLGDFLG------ATGYLFKTKTGELSIKVTEIRLLTKSLR-P 161

Query: 112 LPVFGEREYPESIRFKYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP        + ++++ R++DL   +      V R+++++++R  MI   F+E  TP+L 
Sbjct: 162 LPEKFHGLQDQEVKYRQRYVDLITSEETRATFVARSKVVSAIRNFMIQNEFLEVETPMLH 221

Query: 171 A-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F+          Y +  AP+ Y + L+  GF+R F++   FR+E   S R
Sbjct: 222 PIPGGASAKPFITHHNALDMQMY-MRIAPELYLKRLVVGGFERVFEVNRNFRNEGL-SVR 279

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLR---------GVFEEFSNGNTVSNNFLRICYD 280
              EF  ++   ++ +   +++  EN +R          V E       +S  F R+   
Sbjct: 280 HNPEFTMMEFYAAYTDYQWLMDFTENCIRTAAIAARGTAVLEYQGRELDLSKPFQRLTIV 339

Query: 281 DAIRRYGTDK 290
            AI++Y    
Sbjct: 340 GAIQKYAPQY 349



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 52/307 (16%), Positives = 102/307 (33%), Gaps = 41/307 (13%)

Query: 275 LRICYDDA--IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
             I + +A  ++ Y    P+L    ++    E          ++ LSV    E   +   
Sbjct: 231 PFITHHNALDMQMYMRIAPELYLKRLVVGGFERVFEVNRNFRNEGLSVRHNPEFTMMEFY 290

Query: 333 GGGGNRAFCDRMNE---WARSQGQPGLAYIFWRLDESGNVAGM------GPVAKHLNIVN 383
               +  +     E      +    G A + ++  E             G + K+     
Sbjct: 291 AAYTDYQWLMDFTENCIRTAAIAARGTAVLEYQGRELDLSKPFQRLTIVGAIQKYAPQYT 350

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFY 443
              +     ++   +     G      +     +  + +E        +E  +I+D+P  
Sbjct: 351 LGQLNDEAFLR---AEILKHGTKPFDHAGLGALQLALFEE--TAESQLWEPTYIIDYP-- 403

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
                                     + +D       +++L   G EIA+G    + +E 
Sbjct: 404 -------------------VEVSPLARASDKNPEITERFELFVTGREIANGFSELNDAED 444

Query: 504 MLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
               F     +KE  ++          RA + GMPP GG   GIDR+VM++  + ++R+V
Sbjct: 445 QAARFHAQMKAKEAGDHEAMFYDADFIRALEYGMPPAGGCGIGIDRLVMMITDSASIRDV 504

Query: 560 SLFPMSQ 566
            LFP  +
Sbjct: 505 ILFPHMR 511


>gi|81429206|ref|YP_396207.1| lysyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|123769667|sp|Q38V83|SYK_LACSS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78610849|emb|CAI55901.1| Lysyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 505

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 67/320 (20%), Positives = 124/320 (38%), Gaps = 28/320 (8%)

Query: 5   RTHSCGDLGVSDV----------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH    L                  V ++G +   R  G + F DIRD  G  Q+    
Sbjct: 38  RTHLAAALHEEFEAIEKDDLDVKNQEVTIAGRMMSKRGKGKVGFADIRDRSGKIQIYVRK 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    +  K  +   +    G  +  + + +  ++  G++ + A  +  LS A   PLP 
Sbjct: 98  DEVGEDNYKIFKKADL----GDHLGITGQIMKTDM--GELTVKATHLTFLSKALR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +    +   KR++II+++R  +   +F E  TP+L   +
Sbjct: 151 KYHGLTNVEQIYRQRYLDLIANPESMDRFTKRSKIISAVREYLDTHDFTEVETPVLHGQA 210

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+        + Y L  A + + + L+  G +R ++I   FR+E   +   P 
Sbjct: 211 GGASARPFITHHNALDINLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTKHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP- 291
           EF  L+   ++ +  D+++  E ++R    +      +S     I  D    R       
Sbjct: 269 EFTMLETYAAYFDYKDVMDETEGIIRFAAHKVLGTGQISYQGQAIDLDSDFARVHMVDAI 328

Query: 292 ------DLRNPIIMHNVTEH 305
                 D   P+ + +  E 
Sbjct: 329 KAETGVDFWQPMTVESAREL 348



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 79/209 (37%), Gaps = 15/209 (7%)

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           ++  +G ++  G      +      +   +  + G   +     P+   S        +A
Sbjct: 299 KVLGTGQISYQGQAIDLDSDFARVHMVDAIKAETGVDFW----QPMTVESA-----RELA 349

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            +  +     ++   I++  F E+ E+   +      +  P       K N        +
Sbjct: 350 DQHHVKYEEYWQVGHIINAFFEEFVEDT--LVQPTFIYGHPVEISPLAKKNAEDDRFTDR 407

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHG 537
           ++L  +G E A+     +      + F      +E   +   G       A + GMPP G
Sbjct: 408 WELFMHGNEYANAFTELNDPIDQRERFEAQAKERENGNDEAEGIDEDYVEALEYGMPPTG 467

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+  GIDR+VMLL  A ++R+V LFP  +
Sbjct: 468 GLGIGIDRLVMLLTDAASIRDVLLFPTMR 496


>gi|331701912|ref|YP_004398871.1| Lysyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329129255|gb|AEB73808.1| Lysyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 501

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 77/394 (19%), Positives = 154/394 (39%), Gaps = 39/394 (9%)

Query: 2   HRY-RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RT+    L           + +    V ++G +   R  G + F D++D  G  Q+
Sbjct: 31  HRFVRTYLAEQLHHDFDDEDKDELMEKDKKVTIAGRMIAKRGKGKVGFADLKDRTGKIQI 90

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    +I    +   +    G  +  S + I  ++  G++ + A+ +  LS A   
Sbjct: 91  YVRKDIVGDDIYHIFKRSDI----GDHLGISGQIIKTDM--GELTVRAESVTFLSKALR- 143

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP        +  R++ R+LDL  +       VKRT+I++++R  + + ++ E  TP+L
Sbjct: 144 PLPDKFHGLKDKEQRYRQRYLDLISNQDSFDRFVKRTKIVSAVRKYLDSNDYQEVETPVL 203

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
             S+    AR F+          Y L  A + + + L+  G +R ++I   FR+E   + 
Sbjct: 204 HNSAGGANARPFITHHNALNIDLY-LRIALELHLKRLIVGGLERVYEIGRVFRNEGMDTR 262

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  L+  +++ +  D+++  E + +      ++ N              +  Y  
Sbjct: 263 HNP-EFTMLESYVAYYDFHDVMDETEGIFKAAAAAVTDDN--------------VVTYQG 307

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
              DL  P    ++ +         F + +S +   ++                 +N + 
Sbjct: 308 HTVDLNKPFKRQHMVDAIKEYTGIDFWQPMSDDDAKKLADEHHIHYEPWWKTGHIINAFF 367

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
               QP L    +     G+   + P+AK  +  
Sbjct: 368 EELVQPKLEQPTFIY---GHPVEISPLAKKNHDD 398



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 4/120 (3%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K++     +  P       K N        +++L     E A+     +      Q F  
Sbjct: 374 KLEQPTFIYGHPVEISPLAKKNHDDPRFTDRFELYILTNEFANAFSELNDPIDQRQRFEA 433

Query: 511 VGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
               ++       G       A + GMPP GG+  GIDR+VMLL  A ++R+V LFP  +
Sbjct: 434 QVAERKAGNEEAEGIDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVILFPTMR 493


>gi|224476575|ref|YP_002634181.1| asparaginyl-tRNA synthetase [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421182|emb|CAL27996.1| putative asparaginyl-tRNA synthetase [Staphylococcus carnosus
           subsp. carnosus TM300]
          Length = 430

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 79/322 (24%), Positives = 126/322 (39%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
            + +G  V +  W+H  R  G I FL +RD  G  Q   V +  D   F  AK++  E  
Sbjct: 9   KNHIGQEVTIGAWLHNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEDTFATAKNITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + I+++  A + P+     + +       +R 
Sbjct: 69  LYVTGTITEDNRSDL-------GYEMQVKSIDVIQEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II +         F++   PILTAS+PEG  +       ++ +
Sbjct: 119 LWLRSKKQHAVMKIRNEIIRATYEFFHETGFVKIDPPILTASAPEGTSELFHTKYFDEDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A  + + F   P FR E  ++ R   EF+ ++ EM+F E  D L
Sbjct: 179 F--LSQSGQLYLEAA-AMAYGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFYEHADSL 235

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDAI      G D  +
Sbjct: 236 EVQEQYVTHVVQSVLKNCELELKILDRDTSKLEKVKTPFPRITYDDAIEYLKEQGFDDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 296 WGEDFGASHETAIANHYDLPVF 317



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 66/200 (33%), Gaps = 33/200 (16%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCF--FIAGDPLKFCSFAADARNHIAQELGIINCNC 431
            V K+  +      R    ++   + F      D +++            ++ G  +   
Sbjct: 248 SVLKNCELELKILDRDTSKLEKVKTPFPRITYDDAIEYLKEQGFDDIEWGEDFGASHETA 307

Query: 432 FE-----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDL 484
                    +I ++P                PF M       E++   DL++ + +    
Sbjct: 308 IANHYDLPVFITNYP------------TKIKPFYMQPNPENEETVLCADLIAPEGYG--- 352

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
                EI  G  R +  E++ +      + +      +       + G  PH G   G++
Sbjct: 353 -----EIIGGSERINDLELLEERIEEHQLDR----ESYNYYLDLRRYGSVPHSGFGLGLE 403

Query: 545 RIVMLLLGAKNVREVSLFPM 564
           R V  + G ++VRE + FP 
Sbjct: 404 RTVAWISGVEHVRETAPFPR 423


>gi|160944697|ref|ZP_02091924.1| hypothetical protein FAEPRAM212_02211 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443881|gb|EDP20885.1| hypothetical protein FAEPRAM212_02211 [Faecalibacterium prausnitzii
           M21/2]
 gi|295104347|emb|CBL01891.1| Lysyl-tRNA synthetase (class II) [Faecalibacterium prausnitzii
           SL3/3]
          Length = 503

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 63/294 (21%), Positives = 122/294 (41%), Gaps = 20/294 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             +D G  V L+G +   R  G   F  +RD  G  Q+    D    E   + +   V  
Sbjct: 59  NETDSGKLVALAGRMMSKRVMGKASFAHLRDDKGDIQLYVRRDELGDEAYAAFKKLDVGD 118

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G+      +       TG++ + A ++ +L+ +   PLP          +R++ R++D
Sbjct: 119 IIGV------KGEVFRTKTGELSVRATELTLLAKSLR-PLPEKFHGLTDTEMRYRQRYVD 171

Query: 133 LR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L     +    +KR+RI+  +R  +  + F+E  TPILT       AR F          
Sbjct: 172 LIANPEVKDTFIKRSRILKEIRAYLDEKGFLEVDTPILTPFEIGASARPFYTHHNTLNMD 231

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L    + Y + L+  G DR +++   FR+E       P EF  +++  +F +   ++
Sbjct: 232 M-VLRIETELYLKRLIVGGMDRVYEVGRIFRNEGMDPKHNP-EFTTIELYQAFTDFHGMM 289

Query: 251 NTMENVLRGVFEEF--------SNGNTVSNNFLRICYDDAIRRY-GTDKPDLRN 295
           + +E + + +  +                +++ R+   +A+++Y G D  D + 
Sbjct: 290 DLVEELYKRLALKICGSLVIPYQGKQIDMSHWERLTMVEAVKKYSGVDFNDWQT 343



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 5/123 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML--- 505
           E K+      +  P       K          +++   +  E  +     +         
Sbjct: 377 EDKLIQPTFIYDYPVEISPLAKRKPDDPAFTERFEYFIDCTEYGNAFSELNDPIDQKGRF 436

Query: 506 --QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             Q      +  E           A + G+PP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 437 ERQVAERKALEPECKAQVDYDYVNALEYGLPPTGGLGFGVDRLVMLLTDSASIRDVLLFP 496

Query: 564 MSQ 566
             +
Sbjct: 497 TMK 499


>gi|16330075|ref|NP_440803.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501021|sp|P73443|SYK_SYNY3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1652562|dbj|BAA17483.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 510

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 62/353 (17%), Positives = 133/353 (37%), Gaps = 23/353 (6%)

Query: 6   THSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-- 55
           TH   DL           +V   V ++G +   R  G + F  ++D  G  Q+       
Sbjct: 39  THQAQDLQETYRDLSNGEEVDLKVAIAGRILARRVMGKLAFFTLQDESGTIQLYLEKQRL 98

Query: 56  -SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                E+  +      +   G ++  +          G++ +  Q   +L+ +  LPLP 
Sbjct: 99  TEHMPELENAFNLLKKITDVGDILGVTGTLKRTE--KGELSVYVQTYAVLTKSL-LPLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                     R++ R++DL    T+ +   +R +I  ++R  +  + FIE  TP+L   S
Sbjct: 156 KWHGLTDTEKRYRQRYVDLIVNPTVRQTFRRRAQITAAIRRYLDKQGFIEIETPVLQGES 215

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+       G    L  A + + + L+  GF++ F++   FR+E   +   P 
Sbjct: 216 GGAEARPFITHHNTL-GMPLYLRIATELHLKRLVVGGFEKVFELGRIFRNEGVSTRHNP- 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++V+ ++++   E ++    +       ++     I      +R    +  
Sbjct: 274 EFTSIEVYQAYVDYNEMMALTEALVTTAAQAVLGTLKITYQGEEIDLTPPWKRITMHEA- 332

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
               + +    +    ++     +  +          P+ G   N AF  ++ 
Sbjct: 333 ----VQLETGIDFSQFTDLETAKQAATKAGIGVPEDCPSLGHLLNHAFEQKVE 381



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 59/168 (35%), Gaps = 35/168 (20%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
           C       NH  ++   +     +  +I+DFP      E   +   H             
Sbjct: 365 CPSLGHLLNHAFEQ--KVEGTLMQPTFIIDFPV-----EISPLAKPHR------------ 405

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS-------EVMLQAFSNVGISKEVVENRF 522
                      +++L   G E+A+               E      +   +    V+  F
Sbjct: 406 ----SKPGLVERFELFVYGRELANSFSELTDPIDQRSRLEAQAAKKAAGDLEAHSVDEDF 461

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP--MSQNF 568
                A + GMPP GG+  GIDR+VMLL  + ++R+V  FP   +Q  
Sbjct: 462 ---LTALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLKNQEA 506


>gi|33864663|ref|NP_896222.1| lysyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|39932070|sp|Q7U9X5|SYK_SYNPX RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33632186|emb|CAE06642.1| lysyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 502

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 65/356 (18%), Positives = 125/356 (35%), Gaps = 28/356 (7%)

Query: 6   THSCGDLGVSDV----GSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           TH    L  +      G      V ++G V   R  G + F  + D  G  Q+       
Sbjct: 30  THRMAALHEAHADLPNGEEREVTVSVAGRVMTRRVMGKLAFFTLADETGTIQLFLEKAGL 89

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             +     +    L   G  +  S      +   G++ +      +L+ A + PLP    
Sbjct: 90  EAQQEGWFKQITGLVDGGDWLGVSGTLRRTD--RGELSVKVSDWRMLTKALQ-PLPDKWH 146

Query: 118 REYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
                  R++ R+LDL       +   +R R+++ +R  +   +F+E  TP+L +     
Sbjct: 147 GLADVEKRYRQRYLDLIVSPDSRETFRRRARLVSGIRRWLDQRDFLEIETPVLQSEPGGA 206

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F             L  A + + + L+  GF+R +++   FR+E   +   P EF 
Sbjct: 207 DARPFETHHNALDLPL-TLRIATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP-EFT 264

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            +++  ++ +   ++   E ++  V +E      ++     I      RR          
Sbjct: 265 SVEIYQAYSDYIGMMELTEQMVSAVCQEVCGSCQITYQDTEIDLSPPWRR---------- 314

Query: 296 PIIMHNVTEHFVHSEFRVFS--KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
              MH + E     +F  FS  +  +V    +    P       R   +   +   
Sbjct: 315 -ATMHELVEEATGLDFNSFSSREAAAVAMTGKGLHAPELADSVGRLLNEAFEQAVE 369



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 56/181 (30%), Gaps = 35/181 (19%)

Query: 397 DSCFFIAGDPLKFCSFAADARN-HIAQELGIINCNCFE---------FCWIMDFPFYEWN 446
           D   F + +               +A  +G +    FE           ++ D+P     
Sbjct: 328 DFNSFSSREAAAVAMTGKGLHAPELADSVGRLLNEAFEQAVETTLIQPTFVTDYPV---- 383

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
            E   +   H                        +++L   G E A+            Q
Sbjct: 384 -EISPLARPHR----------------SKPGLVERFELFIVGREHANAFSELTDPVDQRQ 426

Query: 507 AFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                   K       +        A + GMPP GG+  GIDR+VMLL  + ++R+V  F
Sbjct: 427 RLEAQQARKAAGDLEAQGLDEDFVTALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAF 486

Query: 563 P 563
           P
Sbjct: 487 P 487


>gi|257868308|ref|ZP_05647961.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257874419|ref|ZP_05654072.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257877913|ref|ZP_05657566.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257802422|gb|EEV31294.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257808583|gb|EEV37405.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257812079|gb|EEV40899.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 497

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 71/330 (21%), Positives = 132/330 (40%), Gaps = 32/330 (9%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            +++     ++G +   R  G   F  ++D  G  Q+    
Sbjct: 39  RTHNSAELHELFDQRTKEELAEMNLSASIAGRIVTKRGKGKAGFAHLQDREGRIQIYVRK 98

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G     S E +     TG++ + A++I ILS A   PLP 
Sbjct: 99  DQVGDEPYEVFKHADL----GDFFGVSGEIM--KTDTGEVTIKAKEIVILSKALR-PLPD 151

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILT-AS 172
                     R++ R+LDL  +       +KR++II+ +R  +    +IE  TP+L   +
Sbjct: 152 KYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGHGYIEVETPVLHNQA 211

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 212 GGAAARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP- 269

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  L+   ++ +  D+++  E ++R   E+  +  T+           +F RI   DAI
Sbjct: 270 EFTMLEAYTAYTDFKDVMDLTEGIIRNAAEKVLHTATIQYDGQEVDLASDFARIHMVDAI 329

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           +       D   P+ +             +
Sbjct: 330 KN--QTGVDFWQPMSVEEARSLAKEHHVEI 357



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E+ +      F  P       K N        +++L   G E A+     +      + F
Sbjct: 376 EETLQQPTFVFGHPVEVSPLAKKNPEDERFTDRFELFIVGREFANAFTELNDPIDQRERF 435

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +E   +           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP 
Sbjct: 436 EGQEKEREAGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPT 495

Query: 565 SQ 566
            +
Sbjct: 496 MR 497


>gi|253702017|ref|YP_003023206.1| lysyl-tRNA synthetase [Geobacter sp. M21]
 gi|251776867|gb|ACT19448.1| lysyl-tRNA synthetase [Geobacter sp. M21]
          Length = 492

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 71/306 (23%), Positives = 125/306 (40%), Gaps = 20/306 (6%)

Query: 4   YR-THSCGDLGVSDVGSFV--------RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           YR  H+  DL  +     V         ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 30  YRPQHTSADLRAAYGDKEVIEAEPQSFVVAGRILMRRSFGKAAFVQVQDRKGRMQLYMKK 89

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E+     +  +  I G      A        TG++ L+  ++ +L+ +  LPLP 
Sbjct: 90  DTLGEELFAEFENYDIGDIIG------ATGTPFRTKTGELSLAVTELRLLTKSL-LPLPE 142

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R++DL     + +   KR+R+I  +R  M   +F+E  TP++    
Sbjct: 143 KFHGLTDVETRYRQRYVDLIVSPDVREVFYKRSRVIQLIRDFMTKNDFLEVETPMMHPIP 202

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 203 GGATAKPFATHHNALDMELF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 260

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  ++   ++   +D++N  E +L  V +E       S     I +    RR+   +  
Sbjct: 261 EFTMMEFYQAYATFEDLMNYTEELLCHVAQELLGTLDFSYGGEPISFQRPWRRFTVKEAI 320

Query: 293 LRNPII 298
           L    I
Sbjct: 321 LEYGDI 326



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 7/130 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           +E   E K I       T     +  L + +D       +++  C G E+A+     +  
Sbjct: 362 FEEVAEVKLIQPTF--ITNYPTEVSPLSRKSDQDPEYVDRFEFFCAGREMANAFSELNDP 419

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F     +K+  +           RA + G+PP  G   GIDR+VMLL  + ++R
Sbjct: 420 RDQKERFLAQVAAKDKGDEEAHYMDEDYIRALEYGLPPTAGEGIGIDRLVMLLTDSPSIR 479

Query: 558 EVSLFPMSQN 567
           +V LFP  + 
Sbjct: 480 DVILFPQLRK 489


>gi|229542254|ref|ZP_04431314.1| lysyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229326674|gb|EEN92349.1| lysyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 495

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 64/298 (21%), Positives = 122/298 (40%), Gaps = 12/298 (4%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           C +  + +    V ++G +   R  G   F  I+D  G  Q     D+   E  +  +S 
Sbjct: 48  CTEEQLEEKEIPVAIAGRIMTKRRKGRAGFAHIQDLKGQIQFYIRQDAVGEEQYELFKST 107

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            +  I GL      +        G++ +  ++  +L+ A   PLP           R++ 
Sbjct: 108 DLGDIVGL------KGTVFRTKVGELSVKVKEFILLTKALR-PLPDKFHGLRDIEQRYRQ 160

Query: 129 RFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R+LDL   +      + R+RII S+R  +    ++E  TP++ A +    AR F+     
Sbjct: 161 RYLDLIMSEESKNTFITRSRIIQSIRNYLDKNGYLEVETPMMHAIAGGAAARPFITHHNA 220

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  L++  ++ + 
Sbjct: 221 LDIDLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGIDTRHNP-EFTMLELYEAYADF 278

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT-DKPDLRNPIIMHNVT 303
           +DI+   EN++    +E     T+      +  +   RR    D       +   NVT
Sbjct: 279 NDIMQLTENMIVHTAKEVLGTTTIRYGEHEVNLEPEWRRLHMVDAIKEYTGVDFWNVT 336



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I      +  P       + N+       +++L   G E A+     +  
Sbjct: 365 FFEQRVEEKLIQPTFV-YGHPVEISPLARKNEKDPRFTDRFELFIVGREHANAFTELNDP 423

Query: 502 EVMLQAF----SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F           +           A + GMPP GG+  G+DR+VMLL  A ++R
Sbjct: 424 IDQRERFVNQLKEREQGNDEAHQMDEDFIEALEYGMPPTGGLGIGVDRLVMLLTNAPSIR 483

Query: 558 EVSLFPMSQNF 568
           +V LFP+ ++ 
Sbjct: 484 DVLLFPLMKSR 494


>gi|257092653|ref|YP_003166294.1| lysyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257045177|gb|ACV34365.1| lysyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 504

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 62/275 (22%), Positives = 113/275 (41%), Gaps = 13/275 (4%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L  S V   V+++G +   R  G   F+ ++D  G  QV  + D    +     +   +
Sbjct: 61  ELAASPV--EVKVAGRIMLKRVMGKASFITLQDLSGRIQVYVSRDHLGEDDYAGFKRWDL 118

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             I G V             TG++ +   +I +L+ +   PLP        +  +++ R+
Sbjct: 119 GDIVGAV------GTLFRTKTGELTVECLEIRLLAKSLR-PLPEKFHGLTDQEQKYRMRY 171

Query: 131 LDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           +DL  +   +     R+RI+ S+R  M+   F+E  TP++        AR F        
Sbjct: 172 VDLITNEQSRFTFAVRSRIVQSIRSFMVHHGFLEVETPMMHPIPGGATARPFATHHNALD 231

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              + L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ E   
Sbjct: 232 MPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNPEFTMMEFYEAYTEYRQ 289

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
           +++  E +LR    E            R+ +    
Sbjct: 290 LMDFTEGLLRHSAREALGAEAFEYQGRRLDFAKPF 324



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 62/162 (38%), Gaps = 27/162 (16%)

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                   +  + +E      + ++  +I+D+P                           
Sbjct: 364 ATDGLGTLQLKLFEE--TAEADLWDPTFIIDYP---------------------AEVSPL 400

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GG 524
            + +D     A +++L   G EIA+G    +  E     F     +KE  +         
Sbjct: 401 ARRSDSNPEVAERFELFIAGREIANGFSELNDPEDQAARFLEQAKAKEAGDEEAMYYDAD 460

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             RA + G+PP GG   GIDR+VMLL  + N+R+V LFP  +
Sbjct: 461 YVRALEYGLPPTGGCGIGIDRLVMLLTDSPNIRDVILFPQMR 502


>gi|76787024|ref|YP_329498.1| lysyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|123602016|sp|Q3K1V5|SYK_STRA1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|76562081|gb|ABA44665.1| lysyl-tRNA synthetase [Streptococcus agalactiae A909]
          Length = 496

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 63/316 (19%), Positives = 121/316 (38%), Gaps = 28/316 (8%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             D+     ++G +   R  G + F  I+D  G  Q+    
Sbjct: 37  RTATSGQLNEKYADKSKEDLHDIEETATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   E  +  +   +    G  +    + +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DSVGEENYEIFKKADL----GDFLGVEGQVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R LDL  +       V R++II+ +R  M +  F+E  TP+L   +
Sbjct: 150 KFHGLTDIETIYRKRHLDLISNRDSFDRFVTRSKIISEIRRFMDSNGFLEVETPVLHNEA 209

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+            L  A + + + L+  G +R ++I   FR+E   +   P 
Sbjct: 210 GGASARPFITHHNAQDIDM-VLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP- 291
           EF  ++   ++ +  DI++  E +++ V +       ++     I  ++  +R       
Sbjct: 268 EFTSIEAYQAYADYQDIMDLTEGIIQHVTKTVKGDGPINYQGTEIKINEPFKRVHMVDAV 327

Query: 292 ------DLRNPIIMHN 301
                 D    + +  
Sbjct: 328 KEITGIDFWKEMTLEE 343



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ E+   +      F  P       K ND       +++L     E A+   
Sbjct: 365 IINAFFEEFVEDT--LIQPTFVFGHPVEVSPLAKKNDTDPRFTDRFELFVMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 423 ELNDPIDQLSRFEAQASAKELGDDEATGVDYDYVEALEYGMPPTGGLGIGIDRLCMLLTD 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 TTTIRDVLLFPTMK 496


>gi|325568182|ref|ZP_08144623.1| lysine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325158383|gb|EGC70534.1| lysine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 516

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 71/330 (21%), Positives = 132/330 (40%), Gaps = 32/330 (9%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            +++     ++G +   R  G   F  ++D  G  Q+    
Sbjct: 58  RTHNSAELHELFDQRTKEELAEMNLSASIAGRIVTKRGKGKAGFAHLQDREGRIQIYVRK 117

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G     S E +     TG++ + A++I ILS A   PLP 
Sbjct: 118 DQVGDEPYEVFKHADL----GDFFGVSGEIM--KTDTGEVTIKAKEIVILSKALR-PLPD 170

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILT-AS 172
                     R++ R+LDL  +       +KR++II+ +R  +    +IE  TP+L   +
Sbjct: 171 KYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGHGYIEVETPVLHNQA 230

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 231 GGAAARPFITHHNALDMDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP- 288

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  L+   ++ +  D+++  E ++R   E+  +  T+           +F RI   DAI
Sbjct: 289 EFTMLEAYTAYTDFKDVMDLTEGIIRNAAEKVLHTATIQYDGQEVDLASDFARIHMVDAI 348

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           +       D   P+ +             +
Sbjct: 349 KN--QTGVDFWQPMSVEEARSLAKEHHVEI 376



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E+ +      F  P       K N        +++L   G E A+     +      + F
Sbjct: 395 EETLQQPTFVFGHPVEVSPLAKKNPEDERFTDRFELFIVGREFANAFTELNDPIDQRERF 454

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +E   +           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP 
Sbjct: 455 EGQEKEREAGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPT 514

Query: 565 SQ 566
            +
Sbjct: 515 MR 516


>gi|319744806|gb|EFV97146.1| lysine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 533

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 63/316 (19%), Positives = 121/316 (38%), Gaps = 28/316 (8%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             D+     ++G +   R  G + F  I+D  G  Q+    
Sbjct: 74  RTATSGQLNEKYADKSKEYLHDIEETATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRK 133

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   E  +  +   +    G  +    + +  ++  G++ + A  I  LS A   PLP 
Sbjct: 134 DSVGEENYEIFKKADL----GDFLGVEGQVMRTDM--GELSIKATHITHLSKALR-PLPE 186

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R LDL  +       V R++II+ +R  M +  F+E  TP+L   +
Sbjct: 187 KFHGLTDIETIYRKRHLDLISNRDSFDRFVTRSKIISEIRRFMDSNGFLEVETPVLHNEA 246

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+            L  A + + + L+  G +R ++I   FR+E   +   P 
Sbjct: 247 GGASARPFITHHNAQDIDM-VLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP- 304

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP- 291
           EF  ++   ++ +  DI++  E +++ V +       ++     I  ++  +R       
Sbjct: 305 EFTSIEAYQAYADYQDIMDLTEGIIQHVTKTVKGDGPINYQGTEIKINEPFKRVHMVDAV 364

Query: 292 ------DLRNPIIMHN 301
                 D    + +  
Sbjct: 365 KEITGIDFWKEMTLEE 380



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ E+   +      F  P       K ND       +++L     E A+   
Sbjct: 402 IINAFFEEFVEDT--LIQPTFVFGHPVEVSPLAKKNDTDPRFTDRFELFIMTKEYANAFT 459

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 460 ELNDPIDQLSRFEAQASAKELGDDEATGVDYDYVEALEYGMPPTGGLGIGIDRLCMLLTD 519

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 520 TTTIRDVLLFPTMK 533


>gi|56479345|ref|YP_160934.1| lysyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81356212|sp|Q5NY31|SYK_AZOSE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|56315388|emb|CAI10033.1| Lysyl-tRNA synthetase (class II) [Aromatoleum aromaticum EbN1]
          Length = 502

 Score =  204 bits (519), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 61/288 (21%), Positives = 114/288 (39%), Gaps = 20/288 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L  + V   V+++G +   R  G   F+ I+D  G  Q+    D+   ++    +   +
Sbjct: 59  ELDATPV--EVKVAGRIMLKRVMGKASFMTIQDLSGQIQLYVTRDAVGEDVYADFKHWDI 116

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             I G V             TG++ +    I +L+ +   PLP           +++ R 
Sbjct: 117 GDIVGAV------GTLFKTRTGELSVKCTDIRLLTKSLR-PLPDKFHGLTDVEQKYRQRH 169

Query: 131 LDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDL  +   +     R+R++ S+R  M++  F+E  TP++       A            
Sbjct: 170 LDLIMNEQTRFTFVARSRMVQSIRNYMVSHGFLEVETPMMHPIPGGAAAKPFTTHHNALD 229

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  AP+ Y + L+  GF++ F++   FR+E   S R   EF  ++   ++     +
Sbjct: 230 MELFLRIAPELYLKRLVVGGFEKVFEVNRNFRNEGL-SPRHNPEFTMMEFYEAYANYKSL 288

Query: 250 LNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGT 288
           +N  E +LR    E                S  F R+   +AI ++  
Sbjct: 289 MNFTEGLLRQAAREALGTEVFVYQGRELDLSKPFARLTIVEAIHQFHP 336



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 64/179 (35%), Gaps = 36/179 (20%)

Query: 404 GDPLKFCSFAADARNHIAQELGI-----------INCNCFEFCWIMDFPFYEWNEEEKKI 452
            D     +   D +  +  + G+                +E  +I+D+P           
Sbjct: 344 NDEAWLRAKLTDLKAKLRDDAGLGTLQLMLFEETTEAELWEPTFIIDYP----------- 392

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
                            + ND       +++L   G EIA+G    +  E     F    
Sbjct: 393 ----------AEVSPLARRNDANPEITERFELFIVGREIANGFSELNDPEDQAARFLEQV 442

Query: 513 ISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            +KE  +           RA + G+PP GG   GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 443 KAKEAGDEEAMFYDADYIRALEYGLPPTGGCGIGIDRLVMLLTDSPSIRDVILFPQMRT 501


>gi|254491641|ref|ZP_05104820.1| lysyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224463119|gb|EEF79389.1| lysyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 497

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 62/296 (20%), Positives = 123/296 (41%), Gaps = 20/296 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y   S  DL  S     V+++G +   R  G   F ++RD  G  Q+    D     +  
Sbjct: 47  YEHTSADDLKAST--RRVKIAGRLMTKRVMGKASFANLRDMSGDMQLYVKRDDLPEGVYA 104

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             +   +  I       +AE +      G++ +    I +L+ +   PLP        + 
Sbjct: 105 QFKRWDMGDI------IAAEGVMFRTQKGELSVLVDDIRLLTKSLR-PLPEKFHGLSDQE 157

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            R++ R++DL  +   +   + RT+II+ +R  ++ + ++E  TP++ A           
Sbjct: 158 TRYRQRYVDLIMNEASRETFRLRTKIIDGVRRFLMDKGYLEVETPMMQAIPGGATARPFT 217

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
               +      L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   +
Sbjct: 218 TYHNSLDMDLFLRIAPELYLKRLIVGGFERVFEINRNFRNEGLSTRHNP-EFTMVEFYQA 276

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTD 289
           + +  ++++  E +LR V ++    + V            F R+   ++I  +  D
Sbjct: 277 YADHHELMDLTEAMLRTVTQDVLGTSKVHYQGLDIDFAQPFTRMTVTESILHFNPD 332



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 69/171 (40%), Gaps = 9/171 (5%)

Query: 401 FIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
           F      +  +    AR  IA  L I   + +    +     +E   E + +D      T
Sbjct: 329 FNPDIKAEQLNTLEAAR-EIAASLEIPVKDSYGLGKV-QIEIFEKTVEHRLMDPTF--IT 384

Query: 461 MPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
                +  L + +D       +++    G EIA+G    + +E   + F      K+  +
Sbjct: 385 AYPTEVSPLARRSDNDPFVTDRFEFFVGGREIANGFSELNDAEDQAERFQAQVEEKDAGD 444

Query: 520 NRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +          RA + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 445 DEAMHYDADYIRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVLLFPHMR 495


>gi|300704643|ref|YP_003746246.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum
           CFBP2957]
 gi|299072307|emb|CBJ43640.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum
           CFBP2957]
          Length = 510

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 64/307 (20%), Positives = 117/307 (38%), Gaps = 30/307 (9%)

Query: 7   HSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           H   DL                  V ++G +   R  G   F  ++D  G  Q     D 
Sbjct: 46  HHAADLHTRYSETDQPALEAANVEVAIAGRMMLKRVMGKASFATVQDGSGQIQFYITRDR 105

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E+  + +   +  I       +A  +      G++ +  Q++ +LS +   PLP   
Sbjct: 106 VGEEVYAAFKHWDLGDI------IAARGVLFRTNKGELSVQVQELRLLSKSLR-PLPDKF 158

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
                + ++++ R++DL            RT+ I S+R  M    F+E  TP+L      
Sbjct: 159 HGLADQEMKYRQRYVDLIVSPETRNTFRARTKAIASLRRHMGDAGFMEVETPMLHPIPGG 218

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             A+ F+          + L  AP+ Y + L+  GF+R ++I   FR+E   S R   EF
Sbjct: 219 AAAKPFITHHNALDMQMF-LRIAPELYLKRLIVGGFERVYEINRNFRNEGV-SPRHNPEF 276

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEE-----FSNGNTVS----NNFLRICYDDAIRR 285
             ++   ++ +   +++  EN++R    +       N           F R+    AI++
Sbjct: 277 TMMEFYAAYTDYRWLMDYTENLIRRAAIDATGSAVLNYQGRELDLSKPFHRLTIAQAIQK 336

Query: 286 YGTDKPD 292
           Y     D
Sbjct: 337 YAPQYTD 343



 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +        P       + +D  +    +++L   G EIA+G    +  
Sbjct: 380 LFEETAESQLWEPT-FIIDYPVEVSPLARASDTRASITERFELFITGREIANGFSELNDP 438

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   + F      K+  +           RA + GMPP GG   GIDR+VMLL  + N+R
Sbjct: 439 EDQAERFRKQVEQKDAGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIR 498

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 499 DVILFP 504


>gi|22536914|ref|NP_687765.1| lysyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|25010826|ref|NP_735221.1| lysyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76798749|ref|ZP_00780967.1| lysyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77405989|ref|ZP_00783067.1| lysyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77410771|ref|ZP_00787129.1| lysyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77413074|ref|ZP_00789275.1| lysyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|39932195|sp|Q8E0I1|SYK_STRA5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|39932198|sp|Q8E656|SYK_STRA3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|22533765|gb|AAM99637.1|AE014225_20 lysyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|23095205|emb|CAD46415.1| lysyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76585904|gb|EAO62444.1| lysyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77160867|gb|EAO71977.1| lysyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77163150|gb|EAO74103.1| lysyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77175384|gb|EAO78175.1| lysyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 496

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 63/316 (19%), Positives = 121/316 (38%), Gaps = 28/316 (8%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             D+     ++G +   R  G + F  I+D  G  Q+    
Sbjct: 37  RTATSGQLNEKYADKSKEDLHDIEETATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   E  +  +   +    G  +    + +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DSVGEENYEIFKKADL----GDFLGVEGQVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R LDL  +       V R++II+ +R  M +  F+E  TP+L   +
Sbjct: 150 KFHGLTDIETIYRKRHLDLISNRDSFDRFVTRSKIISEIRRFMDSNGFLEVETPVLHNEA 209

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+            L  A + + + L+  G +R ++I   FR+E   +   P 
Sbjct: 210 GGASARPFITHHNAQDIDM-VLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP- 291
           EF  ++   ++ +  DI++  E +++ V +       ++     I  ++  +R       
Sbjct: 268 EFTSIEAYQAYADYQDIMDLTEGIIQHVTKTVKGDGPINYQGTEIKINEPFKRVHMVDAV 327

Query: 292 ------DLRNPIIMHN 301
                 D    + +  
Sbjct: 328 KEITGIDFWKEMTLEE 343



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ E+   +      F  P       K ND       +++L     E A+   
Sbjct: 365 IINAFFEEFVEDT--LIQPTFVFGHPVEVSPLAKKNDTDPRFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 423 ELNDPIDQLSRFEAQASAKELGDDEATGVDYDYVEALEYGMPPTGGLGIGIDRLCMLLTD 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 TTTIRDVLLFPTMK 496


>gi|222055188|ref|YP_002537550.1| lysyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221564477|gb|ACM20449.1| lysyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 494

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 71/302 (23%), Positives = 126/302 (41%), Gaps = 19/302 (6%)

Query: 7   HSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           H+  DL  +               ++G +   R  G   F+ ++D  G  Q+    D+  
Sbjct: 36  HTSADLVAAYGNVQEIEADPQHFIVAGRIIARRSFGKAAFVQLQDRKGRFQLYVKKDAVG 95

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E+ +   S  +  I G      A        TG++ L  ++I +L+ +  LPLP     
Sbjct: 96  EEVFEQFESFDIGDIVG------ATGYPFRTKTGELSLHVEQIRLLTKSL-LPLPEKFHG 148

Query: 119 EYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                 R++ R++DL  +   +   VKR+R+IN +R  M+  +F+E  TP++        
Sbjct: 149 LTDVETRYRQRYVDLIVNPEVRELFVKRSRVINLIREFMVKNDFLEVETPMMQQIPGGAT 208

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          + L  AP+ Y + L+  G DR F+I   FR+E   S R   EF  
Sbjct: 209 ARPFVTHHNALDMELF-LRIAPELYLKRLVVGGLDRVFEINRNFRNEGI-SVRHNPEFTM 266

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           ++   ++   +D++N  E +L  V +        S   + I +    +R+   +  L   
Sbjct: 267 MEFYQAYATFEDLMNYTEELLCHVAQNVLGTLDFSYQGMPISFQRPWKRFTVKEAILEYG 326

Query: 297 II 298
            I
Sbjct: 327 DI 328



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 7/130 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           +E   E K I       T     +  L + +D       +++  C G E+A+     +  
Sbjct: 364 FEEVAETKLIQPTF--ITAYPTEVSPLSRKSDHDPEIVDRFEFFCAGREMANAFSELNDP 421

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F     +K   +           RA + GMPP  G   GIDR+VMLL  A ++R
Sbjct: 422 VDQKERFLAQVAAKAKGDEEAHYMDEDYIRALEYGMPPTAGEGIGIDRLVMLLCDAPSIR 481

Query: 558 EVSLFPMSQN 567
           +V LFP  + 
Sbjct: 482 DVILFPQLRK 491


>gi|289208168|ref|YP_003460234.1| lysyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943799|gb|ADC71498.1| lysyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 496

 Score =  204 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 78/336 (23%), Positives = 132/336 (39%), Gaps = 29/336 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F+ +RD  G  Q+ A  DS    +  + +   +  I G  
Sbjct: 57  GIRVTVAGRMIGKRVMGKASFVRLRDQSGDIQLFAQRDSLPEGVYAAFKHWDLGDIVG-- 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                +       TG++ +   ++ +L+ +   PLP        +  R++ R++DL    
Sbjct: 115 ----GQGTLFKTKTGELTVQLDELRLLTKSLR-PLPEKFHGLTDQEQRYRQRYVDLITSP 169

Query: 138 LHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
             + + + RTRI+  +R     E+FIE  TP++        AR F           Y L 
Sbjct: 170 DSRELFRTRTRIVRYIREYFEREDFIEVETPMMQVIPGGATARPFATHHNALDMPLY-LR 228

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF++ F+I   FR+E   +   P EF  L+   +FV+   +++  E 
Sbjct: 229 IAPELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNP-EFTMLEFYEAFVDYHALMDRTET 287

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE----HFVHSEF 311
           +LRG+ E+     T+               Y  +  D   P     V E    H      
Sbjct: 288 LLRGLCEDVLGTTTIE--------------YQGETYDFGQPFTRMTVREAILAHNPEISS 333

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
              + I  V    E   IP K   G       + E+
Sbjct: 334 EDLADIDKVRAHCERLEIPIKQSFGLGKLWTEIFEY 369



 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 72/202 (35%), Gaps = 20/202 (9%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +   G             +R  +   + +       D  K  +        I Q  G+  
Sbjct: 302 IEYQGETYDFGQPFTRMTVREAILAHNPEISSEDLADIDKVRAHCERLEIPIKQSFGLGK 361

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF--TMPQGGMESL-KGNDLLSIKAFQYDLV 485
                  W      +E+  E K      +P   T     +  L + ND       +++L 
Sbjct: 362 ------LWTE---IFEYTAENK----LRHPTFITAYPTEVSPLARRNDDDPFVTDRFELF 408

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAA 541
             G EIA+G    +  E   + F      K+  ++          RA + G+PP  G   
Sbjct: 409 VGGREIANGFSELNDPEDQAERFQAQVAEKDAGDDEAMHYDADYIRALEYGLPPTAGEGI 468

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           GIDR+VMLL  + ++R+V LFP
Sbjct: 469 GIDRLVMLLTNSPSIRDVLLFP 490


>gi|322689860|ref|YP_004209594.1| lysyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
 gi|320461196|dbj|BAJ71816.1| lysyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
          Length = 560

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 107/563 (19%), Positives = 192/563 (34%), Gaps = 125/563 (22%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANPDSACFEIAKSVR 66
            G+     VG    ++G V  +R  GG+ F+ +   D   I  +++  +      A S++
Sbjct: 108 AGEETEDMVG----IAGRVLFLRNAGGLCFVQLSAGDGTKIQGMISKKEIG----ADSLK 159

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G  +      I +   TG++ + A +  I S A +    +   ++  E  R 
Sbjct: 160 QFKQLVDLGDHLYLKGRVIASK--TGELSVFATEWAIASKALQPLPAL--HKDLNEDTRT 215

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           +  ++ +  D   +N+V+ R++ + S+R      +F+E  TP+L        AR F    
Sbjct: 216 RKPYIGMIADENIRNMVRNRSKAVASLRRTFDDHDFLEVETPMLQTLHGGAAARPFTTHM 275

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ + +  +  G DR F+I   FR+E   +   P EF  ++   ++ 
Sbjct: 276 NAFDLDLY-LRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYG 333

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             D I   ++ +++                       A+  YG+ K      + + + TE
Sbjct: 334 TYDSIGQLVKELVQK---------------------TAMDVYGSHK------VTLLDGTE 366

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +    E++  S   S++       +P  G        + + E A   G            
Sbjct: 367 YDFGGEWKTISMYDSLSESLGEEIVPNGGPEHPGTSVEHLGEIADKLG-----------V 415

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E  +V   G + +HL                                             
Sbjct: 416 ERDDVENHGKLVEHLWEH------------------------------------------ 433

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                  +E  ++ DFP      E   +   H                        ++DL
Sbjct: 434 -FYEDKLYEPTFVRDFPV-----ETSPLVKGHR----------------TKPGVVEKWDL 471

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIA 540
              GFE+A+G    +   V  + F          +            A   GMPP GG+ 
Sbjct: 472 YVRGFELATGYSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMG 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            GIDR+++ L GA  +RE   FP
Sbjct: 532 MGIDRLLIALTGA-TIRETITFP 553


>gi|256544718|ref|ZP_05472090.1| lysine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256399607|gb|EEU13212.1| lysine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 637

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 78/386 (20%), Positives = 151/386 (39%), Gaps = 35/386 (9%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           +R  +    D      G  VR++G +   R HG + F+D++D  G  QV  N  +   + 
Sbjct: 37  NRSLSEDIKDNFEEFEGKIVRVAGRIMARRGHGNMSFMDVQDSLGQIQV-VNRKNIMGDN 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  +   +  I G+      E        G+I +  +  ++L+ + ++ LP        
Sbjct: 96  FKETKGYDIGDIIGI------EGKVFKTNQGEISIETEHADLLTKSLQI-LPEKWHGLKD 148

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
             IR++ R++DL  +   K+  V R++II+ +R  +    F+E  TPIL T +    AR 
Sbjct: 149 PDIRYRQRYVDLIVNPEVKDVFVLRSKIISEIRKFLENRGFLEVETPILNTIAGGASARP 208

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + Y + L+  GFD+ ++I   FR+E   +   P EF  +++
Sbjct: 209 FITHHNSLDIGMY-LRIASELYLKRLIVGGFDKVYEIGRMFRNEGMDATHNP-EFTTMEL 266

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D++   E ++  V  +      V  +   I              +L+ P   
Sbjct: 267 YQAYGDFEDMMEITETMVEEVANKVKGTTLVEFDGKEI--------------ELKTPWKR 312

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--DRMNEWARSQGQPGLA 357
            ++ +         F++I       ++           R     +  +E+   +      
Sbjct: 313 ISMIDAVKEYSGVDFNEITEYEDAVKIAKEKNIEVKSTRGEIIAEFFDEFVEDK------ 366

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVN 383
            I         V  + P+AK  N   
Sbjct: 367 LIQPTFVIDYPVE-ISPLAKRKNDDE 391



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 70/177 (39%), Gaps = 27/177 (15%)

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
           +  D+        ++  S   +       E   +     +  +++D+P            
Sbjct: 332 EYEDAVKIAKEKNIEVKSTRGEIIAEFFDEF--VEDKLIQPTFVIDYP------------ 377

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
              +P    +   ESL          ++++   NG EIA+     + +    Q F +   
Sbjct: 378 VEISPLAKRKNDDESL---------TYRFEAFVNGAEIANAFSELNDAVDQKQRFLDQVA 428

Query: 514 SKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +E  ++           A + GMPP GG+  GIDR++M+L G +++R+V LFP  +
Sbjct: 429 KREAGDDEAHMMDYDFVNALEVGMPPTGGLGIGIDRLIMILTGQRSIRDVLLFPTMK 485


>gi|154486811|ref|ZP_02028218.1| hypothetical protein BIFADO_00639 [Bifidobacterium adolescentis
           L2-32]
 gi|154084674|gb|EDN83719.1| hypothetical protein BIFADO_00639 [Bifidobacterium adolescentis
           L2-32]
          Length = 559

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 107/575 (18%), Positives = 197/575 (34%), Gaps = 130/575 (22%)

Query: 6   THSCGDLGVSDVGS---------FVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANP 54
           T +  ++     G           V ++G V  +R  GG+ F+ +   D   I  +++  
Sbjct: 92  TATIEEVRAKYDGKLEAGAETEDVVGIAGRVLFLRNAGGLCFVQLSAGDGTKIQGMISKK 151

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           +      A S++    L   G  +      I +   TG++ + A +  I + A +    +
Sbjct: 152 EIG----ADSLKQFKQLVDLGDHLFIKGRVIASK--TGELSVFATEWAIAAKALQPLPAL 205

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
              ++  E  R +  ++ +  D   +N+V+ R++ + S+R      +F+E  TP+L T  
Sbjct: 206 --HKDLNEDTRTRKPYIGMIADEKIRNMVRNRSKAVASLRKTFADHDFLEVETPMLQTVH 263

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F           Y L  AP+ + +  +  G DR F+I   FR+E   +   P 
Sbjct: 264 GGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAP- 321

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  ++   ++   D I   ++ +++                     D A+  +G+ K  
Sbjct: 322 EFTMVEAYQAYGNYDTIGALVKQLVQ---------------------DTAMDVFGSHK-- 358

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
               + + + TE+    E++  S   S++       +P  G        + + E A   G
Sbjct: 359 ----VTLLDGTEYDFGGEWKTISMYDSLSEALGEEIVPNGGPDNPGTSVEHLGEIADKLG 414

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
                       E  +V   G + +HL                                 
Sbjct: 415 -----------VERDDVENHGKLVEHLWEH------------------------------ 433

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                              +E  ++ DFP      E   +   H                
Sbjct: 434 -------------FYEDKLYEPTFVRDFPV-----ETSPLVKGHR--------------- 460

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRA 528
              +    ++DL   GFE+A+G    +   V  + F          +            A
Sbjct: 461 -SKAGVVEKWDLYVRGFELATGYSELNDPVVQRERFVAQAKDALAGDEEACDIDEDFLEA 519

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              GMPP GG+  GIDR+++ L GA  +RE   FP
Sbjct: 520 LGVGMPPAGGMGMGIDRLLIALTGA-TIRETITFP 553


>gi|307153161|ref|YP_003888545.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306983389|gb|ADN15270.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 573

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 67/360 (18%), Positives = 134/360 (37%), Gaps = 35/360 (9%)

Query: 6   THSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-- 55
           TH    L           +V   V ++G +   R  G + F +++D  G  Q+  +    
Sbjct: 45  THHAAQLQEKYASLENGEEVDLEVAVAGRIIARRVFGKLAFFNLQDESGTIQLYLDKKRI 104

Query: 56  -SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                ++  +  +   L   G ++             G++ +   +  IL+ +  LPLP 
Sbjct: 105 GQTMADVPNAFNTVMKLTDTGDILGAKGTIKRTE--KGELSIYVNEYAILTKSL-LPLPD 161

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                     R++ R++DL     + +   +R +I  S+R  +  E F+E  TP+L + +
Sbjct: 162 KFHGLTDIEKRYRQRYVDLIINPEVRETFRRRAQITASIRRYLEGEGFLEIETPVLQSEA 221

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+      +   Y L  A + + + L+  GF++ F++   FR+E   +   P 
Sbjct: 222 GGADARPFITYHNTLEMDLY-LRIATELHLKRLIVGGFEKVFEMGRIFRNEGVSTRHNP- 279

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  D++   EN++    ++      V+     I      RR       
Sbjct: 280 EFTSIEIYQAYADYHDMMVLTENIITNAAKDALGTLKVTYQDQEIDLTPPWRR------- 332

Query: 293 LRNPIIMHNVTEHFVHSEFRVF------SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
               + MH + E     +F  F       K                G     +F  ++ E
Sbjct: 333 ----LTMHQLVEEKTGIDFNQFQTFEEGKKAAQKAGIQVSEDCKTLGKLLYESFEQKVEE 388



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 56/166 (33%), Gaps = 29/166 (17%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
           C           ++   +  +  E  +++DFP      E   +   H             
Sbjct: 371 CKTLGKLLYESFEQ--KVEESLIEPTFVLDFPV-----EISPLAKPHR------------ 411

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
                      +++L   G E+A+            +        K        +     
Sbjct: 412 ----NKPGLVERFELYIVGRELANSFSELTDPIDQRERLEAQAEKKAAGDLEAHSVDEDF 467

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP--MSQNFC 569
             A + GMPP GG+  GIDR+VMLL  + ++R+V  FP   SQ+  
Sbjct: 468 LTALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLKSQSAA 513


>gi|295102174|emb|CBK99719.1| Lysyl-tRNA synthetase (class II) [Faecalibacterium prausnitzii
           L2-6]
          Length = 503

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 63/295 (21%), Positives = 123/295 (41%), Gaps = 20/295 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             +D G  V L+G +   R  G   F  +RD  G  Q+    D    +   + +   V  
Sbjct: 59  NETDSGKKVALAGRLMSKRVMGKASFAHLRDDKGDIQLYVRRDELGDDAYAAFKKLDVGD 118

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G+      +       TG++   A++I +L+ +   PLP          +R++ R++D
Sbjct: 119 IIGV------KGEVFRTKTGELSARAEEITLLAKSLR-PLPEKFHGLTDTEMRYRQRYVD 171

Query: 133 LR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L     + +  VKR++I+  +R  +  + F+E  TPILT       AR F          
Sbjct: 172 LIANPEVKETFVKRSKILKEIRAYLDEKGFLEVDTPILTPFEIGASARPFYTHHNTLNMD 231

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L    + Y + L+  G DR +++   FR+E       P EF  +++  +F +   ++
Sbjct: 232 M-VLRIETELYLKRLIVGGMDRVYEVGRIFRNEGMDPKHNP-EFTTIELYQAFTDFHGMM 289

Query: 251 NTMENVLRGVFEEF--------SNGNTVSNNFLRICYDDAIRRY-GTDKPDLRNP 296
           + +E + + + ++                 ++ R+   +A+++Y G D  D +  
Sbjct: 290 DLVEELYKRLAQKICGSLVIPYQGKQIDMGHWERLTMIEAVKKYSGVDFNDWKTD 344



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 5/123 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML--- 505
           E K+      +  P       K          +++   +  E  +     +         
Sbjct: 377 EDKLIQPTFIYDYPVEISPLAKRKPDDPAFTERFEYFIDCTEYGNAFSELNDPIDQKGRF 436

Query: 506 --QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             Q      I  +           A + G+PP GG+  G+DR+VMLL  + ++R+V LFP
Sbjct: 437 ERQVAERKAIEPDCKAQVDYDYVNALEYGLPPTGGLGFGVDRLVMLLTDSASIRDVLLFP 496

Query: 564 MSQ 566
             +
Sbjct: 497 TMK 499


>gi|163791063|ref|ZP_02185484.1| lysyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873708|gb|EDP67791.1| lysyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 499

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 70/390 (17%), Positives = 144/390 (36%), Gaps = 38/390 (9%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R+H   +L  +          +      ++G +   R  G + F  ++D  G  Q+    
Sbjct: 39  RSHLSNELHEAYDKFTKEEIAEKEETATVAGRIMTKRGKGKVGFAHLQDRKGQIQIYVRK 98

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E   + +S  +    G+              TG++ +    +  LS A   PLP 
Sbjct: 99  DAVGEEDYATFKSADLGDFIGV------TGTIMKTDTGEVTIKPTSVTQLSKALR-PLPD 151

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL  +    +   KR++II  +R  +  ++++E  TP L   +
Sbjct: 152 KYHGLTNVEQRYRQRYLDLISNRESFDRFTKRSQIIREVRNYLNEQDYLEVETPTLHNLA 211

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G +R ++I   FR+E   +   P 
Sbjct: 212 GGAAARPFITHHNALDMELY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGVDTTHNP- 269

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D+++ +E ++R V +       ++              Y     D
Sbjct: 270 EFTMLEAYTAYTDFEDVMDLVEGLIRTVAQRVLGTGKIT--------------YNEQAID 315

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
           L +P    ++ +         F + ++      +          +  F   +NE+     
Sbjct: 316 LESPWKRQHMVDAIKEHSGVDFWQQMTNEEARALAKEHDVPVTEHSQFGHVVNEFFEKFV 375

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
           +  L    +     G+   + P+AK     
Sbjct: 376 EDKLIQPTFIY---GHPLEISPLAKKNVED 402



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 12/157 (7%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDL 474
             +A+E  +      +F  +++  F+E   E+K I       +P  +    +      D 
Sbjct: 347 RALAKEHDVPVTEHSQFGHVVN-EFFEKFVEDKLIQPTFIYGHPLEISP--LAKKNVEDP 403

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++    G E  +     +      + F      + +  +           + +
Sbjct: 404 R--FTDRFEAFIVGHEYGNAFSELNDPIDQRERFEAQMQERALGNDEAHMIDEDFIESLE 461

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            GMPP GG+  GIDR+VMLL  A+++R+V LFP  +N
Sbjct: 462 YGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMRN 498


>gi|52080744|ref|YP_079535.1| asparaginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52786115|ref|YP_091944.1| asparaginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319645298|ref|ZP_07999531.1| asparaginyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|81385241|sp|Q65I63|SYN_BACLD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|52003955|gb|AAU23897.1| asparaginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52348617|gb|AAU41251.1| AsnS [Bacillus licheniformis ATCC 14580]
 gi|317393107|gb|EFV73901.1| asparaginyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 430

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 83/321 (25%), Positives = 130/321 (40%), Gaps = 34/321 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVL 71
             VG  V +  W+   R  G I FL +RD  G  Q   V A  D   F+ AKSV  E  L
Sbjct: 10  KHVGEEVTIGAWIANKRSSGKIAFLQLRDGTGFIQGVVVKAEVDEETFQTAKSVTQETSL 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G+V       +         EL+   +E++  A + P+     +E+       +R L
Sbjct: 70  YVKGVVKEDERSPL-------GYELAVTSLEVIHEATDYPITP---KEHGTEFLMDHRHL 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR    H  +  R  II +       E F++   PILT S+PEG  +       ++ ++
Sbjct: 120 WLRSKRQHATMKIRNEIIRATYEFFNKEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY 179

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L 
Sbjct: 180 --LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFNENLE 236

Query: 252 TMENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRY---GTDKPDL 293
             EN +  + +       +  N               F RI YD+AI+     G D  + 
Sbjct: 237 VQENYVSFIVQSVLENCKIELNTLGRDTSKLELIKAPFPRITYDEAIQFLKEKGFDDIEW 296

Query: 294 RNPIIMHNVTEHFVHSEFRVF 314
            +     + T      +  VF
Sbjct: 297 GDDFGAPHETAIAESYDKPVF 317



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 71/224 (31%), Gaps = 37/224 (16%)

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI------RVRLDMQDGDSCFFIAGDPL 407
           P +A++ +  +       +  + + +       +        +L++           + +
Sbjct: 224 PEMAFVEFNENLEVQENYVSFIVQSVLENCKIELNTLGRDTSKLELIKAPFPRITYDEAI 283

Query: 408 KFCSFAADARNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           +F             + G      I  +  +  +I  +P             +  PF M 
Sbjct: 284 QFLKEKGFDDIEWGDDFGAPHETAIAESYDKPVFITHYP------------TSLKPFYMQ 331

Query: 463 QGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
                   +   DL++ + +         EI  G  R H  E++       G+      +
Sbjct: 332 PAPDREDVVLCADLIAPEGYG--------EIIGGSERIHDLELLEARLKEHGLE----SD 379

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +       + G  PH G   G++R V  + G+ +VRE   FP 
Sbjct: 380 AYQWYAELRKYGSVPHSGFGLGLERTVAWICGSPHVRETIPFPR 423


>gi|310829432|ref|YP_003961789.1| hypothetical protein ELI_3882 [Eubacterium limosum KIST612]
 gi|308741166|gb|ADO38826.1| hypothetical protein ELI_3882 [Eubacterium limosum KIST612]
          Length = 488

 Score =  204 bits (518), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 71/343 (20%), Positives = 137/343 (39%), Gaps = 30/343 (8%)

Query: 1   MHRYR-THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           M RY  T    D+     +     V ++G +   R  G + F D++D  G  Q+    D 
Sbjct: 30  MTRYDVTAYADDVNENFEAYEEKPVSMAGRIMSKRGQGKVGFYDLQDSTGKIQMFLKKDL 89

Query: 57  -ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
              ++  K+     ++ I G V              GQI +  +++ +LS + ++ LP  
Sbjct: 90  LENYDEIKTYDIGDIVGIKGEV---------FKTQKGQISVRVKELTLLSKSLQI-LPEK 139

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASS 173
                   +R++ R++DL  +   KN  + R++II  +R  +    FIE  TP+L   + 
Sbjct: 140 YHGLKDTELRYRQRYVDLIVNPEVKNVFILRSQIIRKIREFLDNRGFIEVETPVLYNLAG 199

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y +  A +   + L+  GFD+ ++++  FR+E   +   P E
Sbjct: 200 GANARPFVTHHNALDIPLY-MRIALELPLKRLIVGGFDKVYELSRVFRNEGMDATHNP-E 257

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  L+   ++ + DD++N +E +   + +E    +TV      I      +R        
Sbjct: 258 FTLLETYEAYADYDDVMNMVEALYGFLAKEILGTDTVEYEGHDISLAAPFKRAR------ 311

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
                M ++ E      F V + +       +   +  +    
Sbjct: 312 -----MVDLVEEHTGVNFDVMTDLAEAQEAAKKLHVDVEDKHS 349



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 5/116 (4%)

Query: 460 TMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           TM    +  L   +    +   +++L  NG E A+     +        F      K   
Sbjct: 373 TMHPVEISPLSKREPTDPRYTQRFELFINGAECANAFSELNDPIDQKGRFEAQVQKKADG 432

Query: 519 ENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           ++           A + G+PP GG+  GIDR+VML  G  ++R+V LFP  +   D
Sbjct: 433 DDEAHPYDADFINALEVGLPPTGGLGIGIDRLVMLFTGQHSIRDVILFPTMKPLDD 488


>gi|302023490|ref|ZP_07248701.1| lysyl-tRNA synthetase [Streptococcus suis 05HAS68]
          Length = 496

 Score =  203 bits (517), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 69/345 (20%), Positives = 132/345 (38%), Gaps = 17/345 (4%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   S  DL   ++G    ++G +   R  G   F  I+D  G  Q+    D    E  
Sbjct: 47  QYEDKSKEDL--EELGQTAIIAGRIMTKRGKGKAGFAHIQDREGQIQIYVRKDDVGEENY 104

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  +   +    G  +    +    N+  G++ + A+K+  LS A   PLP         
Sbjct: 105 EIFKKADL----GDFIGVEGDVFKTNV--GELSIHARKLTHLSKALR-PLPEKFHGLTDI 157

Query: 123 SIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             R++ R+LDL  +       V R++II+ +R  +    F+E  TP+L   +   A    
Sbjct: 158 ETRYRKRYLDLITNRESFDRFVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAARPF 217

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           +     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 218 ITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQ 276

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  DI++  E +++   +       V+     I   +  +R           I    
Sbjct: 277 AYADYLDIMDLTEGIIQHTAKAVVGDGPVTYQGTEIAIHEPFKRIHMVDA-----IKEQT 331

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
             + +    F   +K L+      V     + G    +F +   E
Sbjct: 332 GVDFWQEMSFEE-AKALAAEHKVPVEKHHTEVGQIINSFFEEYVE 375



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K ND       +++L     E  +     +     L+ F     +KE+ ++   G     
Sbjct: 396 KKNDEDPRFTDRFELFIMTKEYGNAFTELNDPIDQLERFEAQAKAKELGDDEATGVDYDY 455

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 456 IEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|223933785|ref|ZP_03625756.1| lysyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897553|gb|EEF63943.1| lysyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 496

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 68/345 (19%), Positives = 132/345 (38%), Gaps = 17/345 (4%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   S  +L   ++G    ++G +   R  G   F  I+D  G  Q+    D    E  
Sbjct: 47  QYEDKSKEEL--EELGQTAIIAGRIMTKRGKGKAGFAHIQDREGQIQIYVRKDDVGEENY 104

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  +   +    G  +    +    N+  G++ + A+K+  LS A   PLP         
Sbjct: 105 EIFKKADL----GDFIGVEGDVFKTNV--GELSIHARKLTHLSKALR-PLPEKFHGLTDI 157

Query: 123 SIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             R++ R+LDL  +       V R++II+ +R  +    F+E  TP+L   +   A    
Sbjct: 158 ETRYRKRYLDLITNRESFDRFVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAARPF 217

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           +     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 218 ITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQ 276

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  DI++  E +++   +       V+     I   +  +R           I    
Sbjct: 277 AYADYLDIMDLTEGIIQHTAKAVVGDGPVTYQGTEIAIHEPFKRIHMVDA-----IKEQT 331

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
             + +    F   +K L+      V     + G    +F +   E
Sbjct: 332 GVDFWQEMSFEE-AKALAAEHKVPVEKHHTEVGQIINSFFEEYVE 375



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K ND       +++L     E  +     +     L+ F     +KE+ ++   G     
Sbjct: 396 KKNDEDPRFTDRFELFIMTKEYGNAFTELNDPIDQLERFEAQAKAKELGDDEATGVDYDY 455

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 456 IEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|259501967|ref|ZP_05744869.1| lysine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259170144|gb|EEW54639.1| lysine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 500

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 78/333 (23%), Positives = 127/333 (38%), Gaps = 32/333 (9%)

Query: 4   YRTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
            R H   DL             + G  V ++G + R R  G   F D  D  G  QV A 
Sbjct: 24  KRDHLAQDLHDEYDQYDKDELNEKGEMVTIAGRMTRKRSSGKAGFADFVDRTGKIQVYAR 83

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D    E     +   +    G  +    + I  N  TG++ + A KI  LS A   PLP
Sbjct: 84  KDMVGDEQYHIFKRADI----GDFLGIEGDVIKTN--TGELTVRAHKITFLSKALR-PLP 136

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TA 171
              E        ++ R+LDL  +    K   +RT II ++R  M    F E  TPIL T 
Sbjct: 137 NKWEGVTDPETIYRQRYLDLISNPESFKRFHQRTAIIKAVREYMDDHGFTEVETPILNTQ 196

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F+          Y L  A + Y + L+  GF+R +++   FR+E        
Sbjct: 197 AGGANARPFVTHHNALDIDMY-LRIATELYLKRLIVGGFERVYELGRIFRNEGMD-PHHN 254

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDA 282
            EF  ++   ++ +  D+++  E +++   +  S+   ++           F RI   DA
Sbjct: 255 PEFTTMETYAAYFDFQDVMDETEGIVKAAAKVVSDDGKITYQGREIDLGGDFKRITMVDA 314

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++       D  +  +  +  +         F 
Sbjct: 315 VKE--KTGIDFGDDAMTDDDAKKLAEEHKIEFK 345



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 10/154 (6%)

Query: 421 AQELGIINCNCFEFCW----IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           A++L   +   F+  W    I++  F E+ E+   +      +  P       K N    
Sbjct: 333 AKKLAEEHKIEFKPYWTKGHILNAFFEEYVEDT--LIQPTFVYEYPVEVSPLAKRNKDNP 390

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCG 532
               +++L  +G E+ +     +      + F      K    +  E       +A + G
Sbjct: 391 AMTDRFELYVDGSELGNAFSELNDPIDQKERFEMQAKEKANGNDEAEPVDLDYVQALEYG 450

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP GG+  GIDR+VMLL  AK++R+V LFP  +
Sbjct: 451 MPPTGGLGIGIDRLVMLLTDAKSIRDVILFPTMR 484


>gi|148265268|ref|YP_001231974.1| lysyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146398768|gb|ABQ27401.1| lysyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 494

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 72/302 (23%), Positives = 126/302 (41%), Gaps = 19/302 (6%)

Query: 7   HSCGDLGVSDVGSFV--------RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           H+  DL  +  GS           ++G +   R  G   F+ ++D  G  Q+    D+  
Sbjct: 36  HTSADLFAAYGGSETIDEDPPNFVVAGRIIARRSFGKAAFVQLQDRKGRFQLYVKKDAIG 95

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E+     S  +  I G V             TG++ L   +I +L+ +  LPLP     
Sbjct: 96  DEVFGQFESFDIGDIVGAV------GYPFRTKTGELSLHVLEIRLLTKSL-LPLPEKFHG 148

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                 R++ R++DL  +   + +  KR+RI+N +R  M+  +F+E  TP++        
Sbjct: 149 LTDVETRYRQRYVDLIVNPEVREVFAKRSRIVNLIRAFMVKNDFLEVETPMMQQIPGGAT 208

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          + L  AP+ Y + L+  G DR F+I   FR+E   S R   EF  
Sbjct: 209 ARPFVTHHNALDMELF-LRIAPELYLKRLVVGGLDRVFEINRNFRNEGI-SVRHNPEFTM 266

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           ++   ++   +D++N  E +L  V  +       S   + I +    +R+   +  L   
Sbjct: 267 MEFYQAYATFEDLMNFTEELLCHVAHDVLGTLDFSYQGMPISFQRPWKRFTVKEAILEYG 326

Query: 297 II 298
            I
Sbjct: 327 DI 328



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 7/130 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           +E   E K I       T     +  L + ND       +++  C G E+A+     +  
Sbjct: 364 FEEVAETKLIQPTF--ITAYPTEVSPLSRKNDHDPEIVDRFEFFCAGREMANAFSELNDP 421

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F     +K   +           RA + G+PP  G   GIDR+VMLL  A ++R
Sbjct: 422 VDQKERFLAQVAAKAKGDEEAHYMDEDYIRALEYGLPPTAGEGIGIDRLVMLLTDAPSIR 481

Query: 558 EVSLFPMSQN 567
           +V LFP  + 
Sbjct: 482 DVILFPQLRK 491


>gi|330839287|ref|YP_004413867.1| Lysyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329747051|gb|AEC00408.1| Lysyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 511

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 60/288 (20%), Positives = 116/288 (40%), Gaps = 20/288 (6%)

Query: 2   HRYR-THSCGDL--------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           HRY  T    +L          ++  + V ++G +  +R HG   F  + D  G  Q+  
Sbjct: 39  HRYEVTRHADELLAEFASLGEEAESETEVSIAGRLMAIRGHGKASFAVLMDLSGKIQIYF 98

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
             D    E  K  +   +  I G+        +      G++ +      +LS +   PL
Sbjct: 99  KLDVLGEEKYKEFKLLDIGDIIGV------RGVVFRTRRGELTVRVDDFTLLSKSLR-PL 151

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-T 170
           P          +R++ R++DL  +   K+    RT+II S+R  +    F+E  TP++ T
Sbjct: 152 PEKFHGLKDVEMRYRQRYVDLIMNPEVKDTFIARTKIIQSIRRYLDERGFLEVETPVMST 211

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +    AR F+          Y L  A +   + L+  G +R ++I   FR+E       
Sbjct: 212 IAGGAAARPFVTYHNALDMKLY-LRIATELNLKRLIVGGLERVYEIGRIFRNEGIDVRHN 270

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
           P EF  +++  ++ + +D+++  E +     ++      ++     I 
Sbjct: 271 P-EFTSIEIYQAYADYNDLMDVTEGICCQAAKDVLGTTALTYEGTEID 317



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 11/131 (8%)

Query: 443 YEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           +E   EE  I       +P  +    +      D       +++    G E+A+G    +
Sbjct: 372 FEAKVEESLIQPTFITGHPTEISP--LAKRNPEDPR--ITDRFEFYVYGRELANGFTELN 427

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F      +E  ++           A + G+PP GG+  GIDR+VMLL  + +
Sbjct: 428 DPIDQKERFLEQVKQREAGDDEAHPMDSDFITAMEYGLPPTGGLGIGIDRLVMLLTDSSS 487

Query: 556 VREVSLFPMSQ 566
           +R+V  FP  +
Sbjct: 488 IRDVLFFPHMR 498


>gi|207725250|ref|YP_002255646.1| lysyl-trna synthetase (lysine--trna ligase) (lysrs) protein
           [Ralstonia solanacearum MolK2]
 gi|206590484|emb|CAQ37446.1| lysyl-trna synthetase (lysine--trna ligase) (lysrs) protein
           [Ralstonia solanacearum MolK2]
          Length = 490

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 64/307 (20%), Positives = 117/307 (38%), Gaps = 30/307 (9%)

Query: 7   HSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           H   DL                  V ++G +   R  G   F  ++D  G  Q     D 
Sbjct: 26  HHAADLHTRYSETDQPALEAANVEVAIAGRMMLKRVMGKASFATVQDGSGQIQFYITRDR 85

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E+  + +   +  I       +A  +      G++ +  Q++ +LS +   PLP   
Sbjct: 86  VGEEVYAAFKHWDLGDI------IAARGVLFRTNKGELSVQVQELRLLSKSLR-PLPDKF 138

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
                + ++++ R++DL            RT+ I S+R  M    F+E  TP+L      
Sbjct: 139 HGLADQEMKYRQRYVDLIVSPETRNTFRARTKAIASLRRHMGDAGFMEVETPMLHPIPGG 198

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             A+ F+          + L  AP+ Y + L+  GF+R ++I   FR+E   S R   EF
Sbjct: 199 AAAKPFITHHNALDMQMF-LRIAPELYLKRLIVGGFERVYEINRNFRNEGV-SPRHNPEF 256

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEE-----FSNGNTVS----NNFLRICYDDAIRR 285
             ++   ++ +   +++  EN++R    +       N           F R+    AI++
Sbjct: 257 TMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSAVLNYQGRELDLSKPFHRLTIAQAIQK 316

Query: 286 YGTDKPD 292
           Y     D
Sbjct: 317 YAPQYTD 323



 Score =  107 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +        P       + +D  +    +++L   G EIA+G    +  
Sbjct: 360 LFEETAESQLWEPT-FIIDYPVEVSPLARASDTRASITERFELFITGREIANGFSELNDP 418

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   + F      K+  +           RA + GMPP GG   GIDR+VMLL  + N+R
Sbjct: 419 EDQAERFRKQVEQKDAGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIR 478

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 479 DVILFP 484


>gi|239827463|ref|YP_002950087.1| asparaginyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239807756|gb|ACS24821.1| asparaginyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 430

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 75/298 (25%), Positives = 119/298 (39%), Gaps = 32/298 (10%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKS 64
           +  ++  + VG  V +  W+   R  G I FL +RD  G  Q V    N     F+IAKS
Sbjct: 4   TIAEV-KNYVGQEVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVEKANVTEDVFKIAKS 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E  L + G V                 ELS   +EI+  A + P+     +E+    
Sbjct: 63  ITQETSLYVTGTVRIDERSPF-------GYELSVTNLEIIHEAVDYPITP---KEHGVEF 112

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              +R L LR    H  +  R  +I +         F++   PILT S+PEG  +     
Sbjct: 113 LMDHRHLWLRSRRQHAIMKIRNEVIRATYEFFNNHGFVKVDPPILTGSAPEGTTELFHTK 172

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             ++ ++  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F 
Sbjct: 173 YFDEDAY--LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFY 229

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRYG 287
           E +D L   E  +  + +       +                  F RI YD+AI+   
Sbjct: 230 EFEDNLKLQEEYVSHIVQSVLKNCQLELKTLGRDTTKLELVKPPFPRITYDEAIQLLH 287



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 46/134 (34%), Gaps = 26/134 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG--MESLKGNDLLSIKAFQYDLVCNGFE 490
           +  +I  +P                PF M       E +   DL++ + +         E
Sbjct: 314 KPVFITHYP------------TTLKPFYMQPDPNRPEVVLCADLIAPEGYG--------E 353

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R H  E++ Q      +  +  +          Q G  PH G   G++R +  +
Sbjct: 354 IIGGSERIHDYELLKQRLEEHHLPLDAYK----WYLELRQYGSVPHSGFGLGLERTIAWI 409

Query: 551 LGAKNVREVSLFPM 564
            G  +VRE   FP 
Sbjct: 410 CGVDHVRETIPFPR 423


>gi|302878949|ref|YP_003847513.1| lysyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302581738|gb|ADL55749.1| lysyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 507

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 67/308 (21%), Positives = 126/308 (40%), Gaps = 32/308 (10%)

Query: 5   RTHSCGDLGVSDVGS-----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RTH  G+L   + G             V ++G +   R  G   F  ++D  G  Q+  +
Sbjct: 46  RTHLSGNLH-EEFGELTHDELEAKQIHVAVAGRMMLKRVMGKASFATLQDMSGRLQLFIS 104

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
                 E   + +   +  I G V       +     TG++ +   ++ +L+ +   PLP
Sbjct: 105 NGDVGEEAHAAFKHYDLGDILGAV------GVLFKTKTGELSVRVSQVRLLTKSLR-PLP 157

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA- 171
                   +  +++ R+LDL  +   ++  V RT+II ++R   I   ++E  TP++ + 
Sbjct: 158 EKFHGLADQEQKYRQRYLDLITNPDARHVFVTRTKIIQAIREFFIHHGYLEVETPMMHSI 217

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P
Sbjct: 218 PGGASAKPFETHHNALDMQMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNP 276

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDA 282
            EF  L+   ++ + + ++   E +LR V  +      VS           F R+    A
Sbjct: 277 -EFTMLEFYEAYRDYNYLMGFTEKLLREVARKVLGTTIVSYQGRELDLGKPFHRLTMVQA 335

Query: 283 IRRYGTDK 290
           I++Y    
Sbjct: 336 IQKYHPQF 343



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 27/158 (17%)

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  + +EL       FE  +I+D+P                            + +
Sbjct: 371 LGGLQLSLFEELS--ETLLFEPTFIIDYP---------------------VEVSPLARSS 407

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRA 528
           D       +++L   G E+A+G    + +E     F    I+KE  +           RA
Sbjct: 408 DANPAITERFELFVLGRELANGFSELNDAEDQEARFDAQVIAKEAGDEEAMFKDNDYIRA 467

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + G+PP  G   GIDR++M+L  + ++R+V LFP  +
Sbjct: 468 LEYGLPPTAGEGIGIDRLIMMLTDSSSIRDVILFPQMR 505


>gi|292654841|ref|YP_003534738.1| aspartyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291371103|gb|ADE03330.1| aspartyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 434

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 90/351 (25%), Positives = 156/351 (44%), Gaps = 43/351 (12%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           R RT++      ++ G  V ++GWVH VR  GGI FL +RD  G  QV    D    ++ 
Sbjct: 2   RNRTYTAD----AEPGDTVTVAGWVHEVRDLGGIAFLILRDTSGKIQVKFEKDEMDDDLV 57

Query: 63  KS---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGER 118
           ++   V  E V+ + G V             TG +E++ + +++++ AE +LPL   G+ 
Sbjct: 58  ETGLGVHRESVISVTGEVDEEP------RAPTG-VEVTPESLDVIAEAEAQLPLDPSGKV 110

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +   S R   R LDLR+D +      R  +  ++R +       E +TP + A+  EG  
Sbjct: 111 DAELSTRLDNRTLDLRKDEVKAIFEIRAEVQRAVRDKFRDLRATEINTPKIVATGTEGGT 170

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +    +   Q +F    Q+PQ +KQL++ SG +R F++ P FR E+  + R   E   +D
Sbjct: 171 ELFPITYFGQEAFMN--QSPQLFKQLMVGSGLERVFEVGPIFRAEEHNTPRHLNEATSID 228

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNT--------------VSNNFLRICYDDAIR 284
            E +F++  + ++  E V+   +E                      S  F R+ Y++AI 
Sbjct: 229 FESAFIDHTEAMDVCEAVVTAAYEAVEENCQDELEALGLEEEFEAPSGEFPRLTYEEAIE 288

Query: 285 R------------YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
           R            +G D P      +  +V EH+  +++    K   +   
Sbjct: 289 RINATGELDEQLVWGDDLPTEGEKALGEDVGEHYFITDWPSEIKPFYIKDH 339



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 13/144 (9%)

Query: 433 EFCWIMDFPFYEWNEEEKKI--DFAHNPFTMPQGGMES---LKGNDLLSIKAFQYDLVCN 487
           +  W  D P     E EK +  D   + F            +K +D     +  +D++  
Sbjct: 299 QLVWGDDLP----TEGEKALGEDVGEHYFITDWPSEIKPFYIKDHDDDETLSTGFDMMHP 354

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             E+ SGG R H  + ++  F   G+      + F    + F+ GMPPH G   G +R++
Sbjct: 355 NMELVSGGQREHRFDHLVAGFEQQGLDP----DAFEYYTKMFKYGMPPHAGFGLGGERLI 410

Query: 548 MLLLGAKNVREVSLFPMSQNFCDL 571
           M +LG +N+RE  LFP  +     
Sbjct: 411 MTMLGLENIREAVLFPRDRQRLSP 434


>gi|257389083|ref|YP_003178856.1| aspartyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257171390|gb|ACV49149.1| aspartyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 432

 Score =  203 bits (517), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 87/346 (25%), Positives = 153/346 (44%), Gaps = 43/346 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++      ++ G  V ++GWVH VR  GGI FL +RD  G  QV    +    ++ ++
Sbjct: 4   RTYTAD----AEPGDTVTVAGWVHEVRDLGGIAFLILRDTTGKIQVKFEVEEMDDDLVET 59

Query: 65  ---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
              V  E V+ + G V             TG +E++   ++++S A+   PL   G+ + 
Sbjct: 60  GLNVHRESVISVTGDVEEEP------RAPTG-VEVTPASVDVISEADPELPLDPSGKVDA 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
             S R   R LDLR+D +      R  ++ ++R +       E +TP + A+  EG  + 
Sbjct: 113 ELSTRLDNRTLDLRKDEVKAIFEIRAEVLRAVREQFRELGCTEINTPKIVATGTEGGTEL 172

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   Q +F    Q+PQ +KQL++ SG +R F+I P FR E+  + R   E   +D E
Sbjct: 173 FPITYFGQEAFMN--QSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFE 230

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT--------------VSNNFLRICYDDAIRR- 285
            +F +  + ++  E V++  +E                        +F R+ Y++AI R 
Sbjct: 231 SAFADHTEAMDACEAVVKAAYEAVEENCQDELVALDLADEFEAPEGDFPRLTYEEAIERI 290

Query: 286 -----------YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
                      +G D P      +  +V EH+  +++    K   +
Sbjct: 291 NATGELDEPLVWGDDLPTEGEHALGQDVGEHYFITDWPSEIKPFYI 336



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 69/199 (34%), Gaps = 33/199 (16%)

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF------- 432
           + +    +    +  +GD       + ++  +   +    +     +             
Sbjct: 260 DELVALDLADEFEAPEGDFPRLTYEEAIERINATGELDEPLVWGDDLPTEGEHALGQDVG 319

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           E  +I D+P                PF +     E           +  +D++    E+ 
Sbjct: 320 EHYFITDWP------------SEIKPFYIMDKDDE----------VSTGFDMMHPEMELV 357

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SGG R H  + ++  F   G+        F    + F+ GMPPH G   G +R++M +LG
Sbjct: 358 SGGQREHRYDHLVDGFEQQGLDP----EAFDYYTKMFKYGMPPHAGWGLGGERLIMTMLG 413

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+RE  LFP  +     
Sbjct: 414 LGNIREAVLFPRDRQRLSP 432


>gi|325267116|ref|ZP_08133785.1| lysine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324981469|gb|EGC17112.1| lysine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 504

 Score =  203 bits (517), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 67/297 (22%), Positives = 128/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++   ++      V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 55  GEISKEELDPQAVPVKIAGRIMLKREMGKASFATIQDVTGQIQLYLNNKGVSQEVLDDFN 114

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 115 HWDLGDIIG------AEGTLFKTGKGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 167

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 168 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNEHYLEVETPMMHPIPGGATAKPFVTHH 227

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 228 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 285

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    +S N         F R+   +AI++Y     D
Sbjct: 286 DYERMMQMAEDIIRNASRTVNGTAKISYNGKEVDLESPFERLTILEAIKKYNPHYTD 342



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 378 GCAESKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 416

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F      K+  ++          RA + G+PP GG  
Sbjct: 417 FVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 476

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 477 IGIDRLVMLLTDSQTIRDVILFPQMR 502


>gi|116071683|ref|ZP_01468951.1| lysyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116065306|gb|EAU71064.1| lysyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 502

 Score =  203 bits (517), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 63/357 (17%), Positives = 127/357 (35%), Gaps = 28/357 (7%)

Query: 6   THSCGDLGVSDV----GSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           +H   +L         G      V ++G V   R  G + F  + D  G  Q+       
Sbjct: 30  SHRMAELQADHADLPNGEERELSVAVAGRVMTRRVMGKLAFFTLADETGTIQLFLEKAGL 89

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             +     +    L   G  +  S      +   G++ +  +   +LS + + PLP    
Sbjct: 90  EAQQEGWFKQITSLVDAGDWLGVSGTLRRTD--RGELSVKVRDWRMLSKSLQ-PLPDKWH 146

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRI-INSMRCRMIAENFIECSTPILTASSPEG 176
                  R++ R+LDL      +   +R  + ++ +R  +    F+E  TP+L + +   
Sbjct: 147 GLADVEKRYRQRYLDLIVSPQSRETFRRRALLVSGIRRWLDERQFLEIETPVLQSEAGGA 206

Query: 177 -ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+          Y L  A + + + L+  GF+R +++   FR+E   +   P EF 
Sbjct: 207 DARPFITHHNTLDLPLY-LRIATELHLKRLVVGGFERVYELGRIFRNEGMSTRHNP-EFT 264

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            +++  ++ +   ++   E+++  V ++   G  +      I      RR          
Sbjct: 265 SVEVYQAYSDYIGMMELTESMIAEVCQQVCGGTHIHYQGTDIDLTPPWRR---------- 314

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARS 350
              MH + E      F  F+         E   +   G   +  R   +   +   +
Sbjct: 315 -ATMHELVEEATGLNFEAFTTRAQAAEAMEAAGLEVPGAADSVGRLLNEAFEQRVEA 370



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 56/173 (32%), Gaps = 28/173 (16%)

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                    N   ++   +  N  +  ++ D+P      E   +   H            
Sbjct: 352 AADSVGRLLNEAFEQ--RVEANLIQPTFVTDYPI-----EISPLARKHR----------- 393

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGG 524
                       +++L   G E A+            Q        K       +     
Sbjct: 394 -----SKPGLVERFELFIVGRETANAFSELIDPVDQRQRLEAQQARKAAGDLEAQGLDED 448

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
              A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+ +        +PS
Sbjct: 449 FVHALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLMRPESRP-DEAPS 500


>gi|220905826|ref|YP_002481137.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|219862437|gb|ACL42776.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 509

 Score =  203 bits (517), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 58/297 (19%), Positives = 120/297 (40%), Gaps = 19/297 (6%)

Query: 2   HRYR---THSCGDL--------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           + YR   +H   +L          ++V   V L+G +   R  G + F  ++D  G  Q+
Sbjct: 38  YAYRWEVSHHAAELQRQFADLPSGAEVELEVGLAGRIMARRFMGKLAFATLQDETGTIQL 97

Query: 51  VANPDSACFEI-AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
                     + A++ +    L   G ++             G++ ++  +  IL+ +  
Sbjct: 98  YLEKQRLADHMDAEAFKRLDKLMDTGDIVGVRGTVKRTE--KGELSIAVSEYAILTKSL- 154

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAENFIECSTPI 168
           LPLP           R++ R++DL  +   +   +R   I  ++R  +  ++FIE  TP+
Sbjct: 155 LPLPDKWHGLTDVEKRYRQRYVDLIVNPEVRETFRRRALITAAIRRYLDQQDFIEIETPV 214

Query: 169 LTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L   +    AR F+      +   Y L  A + + + L+  GF++ F++   FR+E   +
Sbjct: 215 LQLEAGGAEARPFITYHNTLEMQMY-LRIATELHLKRLIVGGFEKVFELGRVFRNEGIST 273

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
              P EF  +++  ++ +  D++   EN++    E       +      I      +
Sbjct: 274 RHNP-EFTTIEIYQAYADYQDMMALTENLIVTAAETVLGTLKIDYQGTEIDLTPPWQ 329



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 10/91 (10%)

Query: 480 FQYDLVCNGFEIASGGIRNHMS-------EVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            +++L   G E A+               E+  +  +   +    V+  F     A + G
Sbjct: 416 ERFELFIVGRETANSFSELTDPIDQRQRLELQAERKAAGDLEAHSVDEDF---LTALEHG 472

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP GG+  GIDR+VMLL  A ++R+V  FP
Sbjct: 473 MPPTGGLGIGIDRLVMLLTNAASIRDVIAFP 503


>gi|95929407|ref|ZP_01312150.1| lysyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95134523|gb|EAT16179.1| lysyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 494

 Score =  203 bits (517), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 65/313 (20%), Positives = 125/313 (39%), Gaps = 31/313 (9%)

Query: 6   THSCGDLGVSDVG----------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           +H    +  + V               ++G +   R  G   F+ ++D  G  Q+    +
Sbjct: 33  SHQNAQIHAAHVEDDAAALEGCEQEYVIAGRIMARRDFGKAAFIQVQDRTGRLQIYVGKN 92

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E         V  I G+              T ++ L A+ + +L+ + + PLP  
Sbjct: 93  KIGDEQFAVFGKLDVGDIVGI------SGKPFRTKTDELSLRAESLTLLTKSLQ-PLPEK 145

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                    R++ R+LDL     +     KR++II+ MR  M   +++E  TP++   + 
Sbjct: 146 WHGLTDVETRYRQRYLDLIVNPEVGDVFKKRSQIISLMRAFMQERDYLEVETPMMQPVAG 205

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+      +   + L  AP+ Y + L+  GF+R F+I   FR+E       P E
Sbjct: 206 GATAKPFVTHHNTLKMDLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGISIQHNP-E 263

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIR 284
           F  ++   ++    D+++  E ++  + E+      +S           + R+   +AI 
Sbjct: 264 FTMMEFYQAYATYHDLMDMTEEMIGSIAEKVCGSRVISYGGKDVDLTAPWDRLTVKEAIV 323

Query: 285 RYGT-DKPDLRNP 296
           +YG     DL +P
Sbjct: 324 KYGDISLEDLEDP 336



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 110/348 (31%), Gaps = 53/348 (15%)

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           + +  +F+++ D L     +++ V      G   +  F+       +  +    P+L   
Sbjct: 180 ISLMRAFMQERDYLEVETPMMQPVA-----GGATAKPFVTHHNTLKMDLFLRIAPELYLK 234

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
            ++    E          ++ +S+    E   +              M E         +
Sbjct: 235 RLVVGGFERVFEINRNFRNEGISIQHNPEFTMMEFYQAYATYHDLMDMTEEM-------I 287

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA--- 413
             I  ++  S  ++  G         +   ++  + ++ GD       DP K  ++A   
Sbjct: 288 GSIAEKVCGSRVISYGGKDVDLTAPWDRLTVKEAI-VKYGDISLEDLEDPDKALAYANSI 346

Query: 414 ----------ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463
                           +  E  +     +   ++ ++P  E +   ++            
Sbjct: 347 GLEFEGTIGYGKLLTELFDE--VAEPKLWNPTFVTEYPT-EVSPLSRR------------ 391

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM----LQAFSNVGISKEVVE 519
                   ND       +++L   G E+A+     +          Q         +   
Sbjct: 392 --------NDERPEVVDRFELFVVGRELANAFSELNDPVDQKGRFEQQLVEKEAGDDEAH 443

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                  RA + G+PP  G   GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 444 AMDEDYIRALEYGLPPTAGEGIGIDRLVMLLTDSASIRDVILFPQLRK 491


>gi|325981413|ref|YP_004293815.1| lysyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325530932|gb|ADZ25653.1| lysyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 501

 Score =  203 bits (517), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 56/293 (19%), Positives = 124/293 (42%), Gaps = 20/293 (6%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           C    + +  + V+++G +   R  G   F  I+D  G  Q+  + D        + +  
Sbjct: 53  CSKEELEEQSAVVKIAGRMVLKRVMGKASFATIQDMTGRIQLYISNDHTGETAHAAFKHY 112

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            +  I G      A+ I     TG++ +   ++++L+ +   PLP        +  +++ 
Sbjct: 113 DLGDILG------AQGILFKTKTGELSIRVTELQLLTKSLR-PLPEKFHGLADQEQKYRQ 165

Query: 129 RFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R+LDL  +   + +   R+R+I ++R   +  N++E  TP++        A+ F      
Sbjct: 166 RYLDLITNEETRRVFTIRSRVIQAIREFFVERNYLEVETPMMHPIPGGASAKPFSTHHNA 225

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
              + + L  AP+ Y + L+  G ++ F+I   FR+E   +   P EF  L+   ++ + 
Sbjct: 226 LDMALF-LRIAPELYLKRLVVGGMEKVFEINRNFRNEGISTRHNP-EFTMLEFYEAYQDH 283

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDK 290
             +++  E +L    ++      ++           F+R+    AI+++    
Sbjct: 284 TYLMDFTEQMLAYTAQKVLGTTHLTYQGKTMDLSRPFMRLTIIQAIQKFHPHY 336



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 67/199 (33%), Gaps = 30/199 (15%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +  + K         +  R  +        I  +P          +  +  E     
Sbjct: 323 LTIIQAIQKFHPHYTAAQLNDRNYLIQALEALKIHYNP---NDGLGGLQLSLFDE--TTE 377

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              FE  +I+D+P               +P          +           +++L   G
Sbjct: 378 HLLFEPTFIVDYP------------AEVSPLARRNDNNPDITD---------RFELYIAG 416

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGID 544
            EIA+G    +  E     F     +K+       +      RA + G+PP  G   GID
Sbjct: 417 REIANGFSELNDPEDQAARFLEQAKAKDAGDSEAMHYDADYIRALEYGLPPTAGEGIGID 476

Query: 545 RIVMLLLGAKNVREVSLFP 563
           R+VMLL  + ++R+V LFP
Sbjct: 477 RLVMLLTDSPSIRDVILFP 495


>gi|325959112|ref|YP_004290578.1| aspartyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325330544|gb|ADZ09606.1| aspartyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 439

 Score =  203 bits (516), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 89/320 (27%), Positives = 150/320 (46%), Gaps = 25/320 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH    +        V + GW+H +R  GGIIF+ +RD  G+TQV A     +   FE 
Sbjct: 10  RTHYSKQIKPEMKDEDVVIMGWIHEMRDLGGIIFVLLRDRDGVTQVTAPSKKIEPELFEE 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
            K ++ E V+ + G V   +          G +E+  + I++LS ++  LPL    +   
Sbjct: 70  LKKLKKESVIAVKGRVQESAK-------APGGVEIIPETIKLLSESKLPLPLDTTEKVRA 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RF+DLR+ ++      ++R+++S+R  + +EN+ E +TP L  S+ EG  + 
Sbjct: 123 EIDTRLDSRFIDLRKHSVSAIFKVKSRMLHSVRNFLESENYTEINTPKLVGSATEGGTEL 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F  L Q+PQ YKQ++MASGFD  ++IAP FR E+  + R   E   +D+E
Sbjct: 183 FPITYFEREAF--LGQSPQLYKQMMMASGFDNVYEIAPIFRAEEHDTLRHLNEVISIDVE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAIRRYGT 288
            +F +Q D +N +E ++     +                      F RI YD+ +     
Sbjct: 241 TAFTDQIDAMNILEKMVVKAITDVKEHCKDALDTLEFDLQIPETPFPRIEYDEMVEMVNN 300

Query: 289 DKPDLRNPIIMHNVTEHFVH 308
               + +   M    E  + 
Sbjct: 301 KGVKMEHGEDMSRAAEKVMG 320



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 4/97 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
              K+  +DL+    EI+SG +R H  +++++   + G++     + F     AF+ GMP
Sbjct: 347 DPAKSCAFDLMYKDLEISSGAMRIHNHDLLVEKIKSKGLNP----DSFNRYLAAFEYGMP 402

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PH G   G +R  M + G  N+RE  LFP  +     
Sbjct: 403 PHAGWGVGAERFTMTMTGQTNIRETVLFPRDRRRLTP 439


>gi|323705368|ref|ZP_08116943.1| asparaginyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535270|gb|EGB25046.1| asparaginyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 431

 Score =  203 bits (516), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 70/337 (20%), Positives = 131/337 (38%), Gaps = 30/337 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
              VG  V ++GW++  R  G I FL IRD  G      V    D   FE+   +  E  
Sbjct: 10  KDHVGEEVTINGWLYNKRSSGKIKFLIIRDGSGFVQGIVVKNEVDENVFELCDKLTQESS 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G+V                 EL+ + I+++ +A          +E+        R 
Sbjct: 70  ISVSGIVRKDERSPF-------GFELTVKNIDLIQMA--FNDYPISLKEHGVDFLLDNRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L +R       +  R  +I S++  +   +F+   +PI+T S+ EG  D        + +
Sbjct: 121 LWIRTPRQQAILSIRHEVIKSIQEFLNNNDFVRIDSPIITPSTCEGTSDLFQIDYFGENA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q  Q Y Q   A    + +   P FR E  ++ R   EF+ ++ EM+FV+    +
Sbjct: 181 Y--LSQTGQLY-QEAAAMALGKVYSFGPTFRAEKSKTRRHLNEFWMVEPEMAFVDHYANM 237

Query: 251 NTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
              E ++  + +               + S    +   F R+ YD+AI     +  +++ 
Sbjct: 238 EVQEKLVEYIVQSVLENCSRELKELGRDLSKLEKIKTPFPRLTYDEAIELLNKNGYEIQW 297

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
              + +  E F+ ++F     I       + + +  K
Sbjct: 298 GNDLGSPDETFLSNQFDKPVFITEYPAKCKAFYMQPK 334



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 54/152 (35%), Gaps = 31/152 (20%)

Query: 421 AQELGIINC----NCF-EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM--ESLKGND 473
             +LG  +     N F +  +I ++P                 F M       E +   D
Sbjct: 298 GNDLGSPDETFLSNQFDKPVFITEYP------------AKCKAFYMQPKEDRPEVVLCAD 345

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           LL+ + +         EI  G  R H  +++++      +      + +       + G 
Sbjct: 346 LLAPEGYG--------EIIGGSQRIHDYDLLVKRLKEENLPI----DMYDWYLDLRKYGT 393

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            PH G   GI+R V  +   ++VRE   FP +
Sbjct: 394 VPHSGFGLGIERTVAWITNTEHVRECIPFPRT 425


>gi|288560271|ref|YP_003423757.1| aspartyl-tRNA synthetase AspS [Methanobrevibacter ruminantium M1]
 gi|288542981|gb|ADC46865.1| aspartyl-tRNA synthetase AspS [Methanobrevibacter ruminantium M1]
          Length = 440

 Score =  203 bits (516), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 88/327 (26%), Positives = 145/327 (44%), Gaps = 26/327 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           RTH   D+     G  V + GWVH +R  GGIIF+ IRD  G+ Q+ A     D+   E 
Sbjct: 10  RTHYSKDVNPDISGEEVIIMGWVHEIRDLGGIIFVIIRDRDGLVQITAPSKKVDAEILEE 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
            +++R E V+ I G V                +E+   K  IL+ A++  P+    + + 
Sbjct: 70  LRALRKESVVAIKGTVQEAGK-------APNGVEIIPIKTTILNPAKQPLPMDPTEKVKA 122

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RFLDLR+  +      +  +  ++R     +  IE +TP L AS+ EG  + 
Sbjct: 123 EIDTRLNSRFLDLRKANVSSIFKIKANMFKAVRQYFDEQGMIEINTPKLVASATEGGTEL 182

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F  L Q+PQ YKQ++M +GFD+ F+I   FR E+  + R   E   +D E
Sbjct: 183 FPITYFEKEAF--LGQSPQLYKQMMMGAGFDKVFEIGQIFRAEEHDTLRHLNEAVSIDCE 240

Query: 241 MSFVEQDDILNTMENVLRGVFE-------------EFSNGNTVSNNFLRICYDDAIRRYG 287
           +SF +  D++N ++ ++  V +             E+         F  + YDDA+    
Sbjct: 241 ISFADDVDVMNVLDGMITRVLQSTKENCAKELETLEYDLSAIPEGPFPEVKYDDAVDIIN 300

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVF 314
           +   D+     +    E  +      F
Sbjct: 301 SKGIDMEWGEDLSREAEKALGDTQEGF 327



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 27/157 (17%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           D      + LG        F ++ D+P             A  PF               
Sbjct: 311 DLSREAEKALGDTQEG---FYFLTDWP------------SAIKPFYAMPYED-------- 347

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               +  +DL+    EI+SG IR H  +++++      ++     + FG   +AF+ GM 
Sbjct: 348 RPEISHAFDLMYKNLEISSGSIRVHQYDLLVKQMIERDLNP----DGFGSYLKAFEYGMA 403

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PH G   G DR+ M+L G +N+RE  LFP  ++    
Sbjct: 404 PHAGWGVGADRLAMVLTGVENIRETVLFPRDRHRLTP 440


>gi|254669925|emb|CBA04495.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 503

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 70/297 (23%), Positives = 131/297 (44%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                S Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDISLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    +S N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTAKISYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score =  100 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F +    K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|83719490|ref|YP_442413.1| lysyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167581336|ref|ZP_02374210.1| lysyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
 gi|167619418|ref|ZP_02388049.1| lysyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257138615|ref|ZP_05586877.1| lysyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|123767660|sp|Q2SXD6|SYK_BURTA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|83653315|gb|ABC37378.1| lysyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 508

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 65/308 (21%), Positives = 118/308 (38%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL  +   +           V ++G +   R  G   F  ++D  G  Q    P 
Sbjct: 43  THHAADLQTAYADADKEALEAKSLEVAIAGRMMLKRVMGKASFATVQDGSGQIQFFVTPA 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +L+ A   PLP  
Sbjct: 103 DVGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVKCTQLRLLAKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 +  R++ R++DL            RT+ I S+R  M   +F+E  TP+L     
Sbjct: 156 FHGLADQETRYRQRYVDLIVTPETRTTFRARTKAIASIRKFMGDADFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFVTHHNALDMEMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T+            F R+    AI+
Sbjct: 274 FTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATIQYQGRELDLAQPFHRLTITQAIQ 333

Query: 285 RYGTDKPD 292
           +Y     D
Sbjct: 334 KYAPSYTD 341



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +         +    + + +D ++    +++L   G EIA+G    +  
Sbjct: 378 LFEETAEAQLWEPTFIIDYPIEVSPLA-RESDTVAGITERFELFITGREIANGFSELNDP 436

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      K+  +           RA + GMPP GG   GIDR+VMLL  +  +R
Sbjct: 437 EDQAARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIR 496

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 497 DVLLFP 502


>gi|295398908|ref|ZP_06808890.1| asparaginyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312110485|ref|YP_003988801.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294978374|gb|EFG53970.1| asparaginyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311215586|gb|ADP74190.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 430

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 75/303 (24%), Positives = 119/303 (39%), Gaps = 32/303 (10%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKS 64
           +  ++  + VG  V +  W+   R  G I FL +RD  G  Q V          F+IAKS
Sbjct: 4   TIAEV-KNYVGQEVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVEKSKVTEEVFQIAKS 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E  L + G V                 ELS   +EI+  A + P+     +E+    
Sbjct: 63  ISQETSLYVTGTVRVDERSPF-------GYELSVTNLEIIHEAVDYPITP---KEHGVEF 112

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              +R L LR    H  +  R  +I +         F++   PILT S+PEG  +     
Sbjct: 113 LMDHRHLWLRSRRQHAIMKIRNEVIRATYEFFNDRGFVKVDPPILTGSAPEGTTELFHTK 172

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             ++ ++  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F 
Sbjct: 173 YFDEDAY--LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFY 229

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRYGTD 289
           E +D L   E  +  + +       +                  F RI YD+AI+     
Sbjct: 230 EFEDNLTLQEEYVSHIVQSVLENCQLELKTLGRDTTKLELVKPPFPRITYDEAIQLLHDK 289

Query: 290 KPD 292
             D
Sbjct: 290 GFD 292



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 46/134 (34%), Gaps = 26/134 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFE 490
           +  +I  +P             A  PF M         +   DL++ + +         E
Sbjct: 314 KPVFITHYP------------AALKPFYMQPDPDRPDVVLCADLIAPEGYG--------E 353

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R H  E++ +      +  +  +          Q G  PH G   G++R V  +
Sbjct: 354 IIGGSERIHDYELLKKRIEEHHLPLDAYK----WYLELRQYGSVPHSGFGLGLERTVAWI 409

Query: 551 LGAKNVREVSLFPM 564
            G  +VRE   FP 
Sbjct: 410 CGVDHVRETIPFPR 423


>gi|39997369|ref|NP_953320.1| lysyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|39984260|gb|AAR35647.1| lysyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298506306|gb|ADI85029.1| lysyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 491

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 67/279 (24%), Positives = 123/279 (44%), Gaps = 11/279 (3%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +   R  G   F+ I+D  G  QV    D+   E  ++  +  +  I G+     
Sbjct: 57  TVAGRIIARRSFGKAAFIQIQDRKGRMQVYVRKDTVGDEAFEAFETFDIGDIVGV----- 111

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                    TG++ L+A  I +L+ + + PLP           R++ R++DL  +   + 
Sbjct: 112 -GGTPFRTKTGELTLNAAFIRLLTKSLQ-PLPEKFHGLTDVETRYRQRYVDLIVNPEVRE 169

Query: 142 -IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             VKR+RI+N +R  M+ ++F+E  TP++        AR F+          + L  AP+
Sbjct: 170 VFVKRSRIVNLIREFMVRKDFLEVETPMMQPIPGGATARPFVTHHNALDMQLF-LRIAPE 228

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++   +D+++  E +L  
Sbjct: 229 LYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYQAYATFEDLMDFTEELLCH 287

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           V +E       +   + I +    +R    +  L    I
Sbjct: 288 VAQEVLGTLDFTYQEMPISFQRPWKRLAVVEAILEYGDI 326



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 7/130 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           +E   E K I       T     +  L + +D       +++L   G E+A+     +  
Sbjct: 362 FEEVAETKLIQPTF--ITAYPTEVSPLSRKSDKDPEIVDRFELFIAGREMANAFSELNDP 419

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F     +K   ++          RA + G+PP  G   GIDR+VMLL  + ++R
Sbjct: 420 VDQKERFLAQVAAKAKGDDEAHYMDEDYIRALEFGLPPTAGEGIGIDRLVMLLTDSPSIR 479

Query: 558 EVSLFPMSQN 567
           +V LFP  + 
Sbjct: 480 DVILFPQLRK 489


>gi|332638688|ref|ZP_08417551.1| lysyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 494

 Score =  203 bits (516), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 67/331 (20%), Positives = 122/331 (36%), Gaps = 29/331 (8%)

Query: 2   HRY-RTHSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH+   L      +           V ++G +   R  G I F DI+D  G  QV
Sbjct: 32  HRFERTHTAAQLHELYDDTTAEDLEAQAIEVTIAGRMMTKRRSGKISFADIKDRSGRIQV 91

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
                    E  + ++   +  I G                G++ ++   +  L+ A   
Sbjct: 92  FVQKPVVGEEAYELLKKSDLGDILGF------TGTVMKTRAGELSINVTALTHLTKALR- 144

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           +++ R+LDL  +       VKR++II ++R  +  E FIE  TP+L
Sbjct: 145 PLPDKFHGLTDVETKYRQRYLDLISNEDSFERFVKRSKIITAIRHYLDGEGFIEVETPML 204

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y +  A + + + L+  G +R ++I   FR+E     
Sbjct: 205 QNEAGGASARPFITHHNALDIDLY-MRIALELHLKRLIVGGMERVYEIGRVFRNEGMDPK 263

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  ++   ++   +D++   EN+++      ++   V+     I       R   
Sbjct: 264 HNP-EFTVIETYAAYWNFEDVMVETENIIKAAAAAVTDDLKVTYQGHDIDLAQPFARKHM 322

Query: 289 DK-------PDLRNPIIMHNVTEHFVHSEFR 312
                     D   P+ +            +
Sbjct: 323 VDLIKETTGVDFWQPMTIEEARAIADDKGVK 353



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 6/153 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IA + G+     +    I++  F E+ E+   +      +  P       K N+    
Sbjct: 344 RAIADDKGVKYEQYWGVGHIINEFFEEFVEDT--LIQPTFVYGHPVEVSPLAKKNETDDR 401

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGM 533
              +++L   G E  +     +      + F      ++   +   G       A + GM
Sbjct: 402 FTDRFELFIVGAEYGNAFTELNDPIDQRERFEAQVAERDAGNDEAEGIDEDFIEALEYGM 461

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG+  GIDR+VMLL     +R+V LFP  +
Sbjct: 462 PPTGGLGIGIDRLVMLLTDTDTIRDVLLFPTMR 494


>gi|254672942|emb|CBA07339.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha275]
 gi|325136531|gb|EGC59135.1| lysyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 503

 Score =  203 bits (516), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 69/297 (23%), Positives = 129/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      EI     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEILDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E ++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNERYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    ++ N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIIDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F +    K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|229818183|ref|ZP_04448465.1| hypothetical protein BIFANG_03478 [Bifidobacterium angulatum DSM
           20098]
 gi|229784434|gb|EEP20548.1| hypothetical protein BIFANG_03478 [Bifidobacterium angulatum DSM
           20098]
          Length = 557

 Score =  202 bits (515), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 108/575 (18%), Positives = 197/575 (34%), Gaps = 130/575 (22%)

Query: 6   THSCGDLGVSDVGS---------FVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANP 54
           T +  ++     G           V ++G V  +R  GG+ F+ +   D   I  +++  
Sbjct: 90  TATIEEVRAKYDGKLEAGDETEDVVGIAGRVLFLRNAGGLCFVQLAAGDGTKIQGMISKK 149

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           +      A S++    L   G  +      I +   TG++ + A +  I + A +    +
Sbjct: 150 EIG----ADSLKQFKQLVDLGDHLFIKGRVIASK--TGELSVFATEWAIAAKALQPLPAL 203

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
              +E  E  R +  ++ +  D   +N+V+ R++ + S+R      +F+E  TP+L T  
Sbjct: 204 --HKELNEDTRTRKPYIGMIADEKIRNMVRNRSKAVASLRKTFADHDFLEVETPMLQTVH 261

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F           Y L  AP+ + +  +  G DR F+I   FR+E   +   P 
Sbjct: 262 GGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAP- 319

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  ++   ++   D I   ++ +++                     D A+  +G+ K  
Sbjct: 320 EFTMVEAYQAYGNYDTIGALVKQLVQ---------------------DTAMDVFGSHK-- 356

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
               + + + TE+    E++  S   S++       +P  G        + + E A   G
Sbjct: 357 ----VTLLDGTEYDFGGEWKTISMYDSLSEALGEEIVPNGGPDSPGTSVEHLGEIADKLG 412

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
                       E  +V   G + +HL                                 
Sbjct: 413 -----------VERDDVENHGKLVEHLWEH------------------------------ 431

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                              +E  ++ DFP      E   +   H                
Sbjct: 432 -------------FYEDKLYEPTFVRDFPV-----ETSPLVKGHR--------------- 458

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRA 528
              +    ++DL   GFE+A+G    +   V  + F          +            A
Sbjct: 459 -SKAGVVEKWDLYVRGFELATGYSELNDPVVQRERFVAQAKDALAGDEEACDIDEDFLEA 517

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              GMPP GG+  GIDR+++ L GA  +RE   FP
Sbjct: 518 LGVGMPPAGGMGMGIDRLLIALTGA-TIRETITFP 551


>gi|261392312|emb|CAX49838.1| lysyl-tRNA synthetase (lysine--tRNA ligase; LysRS) [Neisseria
           meningitidis 8013]
          Length = 503

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 69/297 (23%), Positives = 130/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNQGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    ++ N         F R+   DAI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRAVNGTANITYNGKEVDLESPFERLTILDAIKKYNPHYTD 341



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIIDYP---------------------VEVSPLARASDSKPGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F      K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|318042860|ref|ZP_07974816.1| lysyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 502

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 60/345 (17%), Positives = 129/345 (37%), Gaps = 29/345 (8%)

Query: 6   THSCGDLGVSDV----GSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS- 56
           +H   +L  +      G      V ++G V   R  G + F  + D  G  Q+     + 
Sbjct: 30  SHRTAELQAAHADLANGEERDLAVAVAGRVMTRRVMGKLAFFTLADETGPIQLFIEKATL 89

Query: 57  --ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
             +  +  ++      L   G ++         +   G++ +  +  ++LS + + PLP 
Sbjct: 90  AASMPDDPEAFAHITSLVDAGDLIGVQGTLRRTD--RGELSVKVKSWQMLSKSLQ-PLPD 146

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRI-INSMRCRMIAENFIECSTPILTA-S 172
                     R++ R+LDL      +   +R  + ++++R  +    F+E  TP+L +  
Sbjct: 147 KWHGLSDVEKRYRQRYLDLIVSPDTRETFRRRALAVSAIRRWLDERGFLEIETPVLQSVP 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F             L  A + + + L+  GF+R +++   FR+E   +   P 
Sbjct: 207 GGADARPFETHHNALDLPL-TLRIATELHLKRLVVGGFERVYELGRIFRNEGISTRHNP- 264

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ + +D+++  E ++  V ++     T+      I      RR       
Sbjct: 265 EFTSIEVYQAYADYNDMMDLTEQLIAHVCQQVCGSTTIRYQGNEIDLTPPWRR------- 317

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
               + MH + +     +F  F          E   + A     +
Sbjct: 318 ----VTMHELVQEATGLDFGAFGSRAEAAAAMEAKGLAAPALADS 358



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 52/141 (36%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +  +  +  +++D+P      E   +  AH                        +++L  
Sbjct: 371 VETDLIQPTFVIDYPV-----ENSPLARAHR----------------SKPGLVERFELFI 409

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMPPHGGIAAG 542
            G E A+            Q        K    +  +       +A + GMPP GG+  G
Sbjct: 410 VGRETANAFSELIDPVDQRQRLEAQMARKAAGDDEAQEVDEDFIQALEVGMPPTGGLGIG 469

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR+VMLL  + ++R+V  FP
Sbjct: 470 IDRLVMLLTDSASIRDVIAFP 490


>gi|332652695|ref|ZP_08418440.1| lysine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332517841|gb|EGJ47444.1| lysine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 643

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 63/283 (22%), Positives = 120/283 (42%), Gaps = 20/283 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +  G  V ++G +   R  G + F D++D  G  Q+ A  D    E     +   +    
Sbjct: 57  ALEGQPVSIAGRLMSKRGMGKVSFCDLQDKSGRIQLYARKDEMDEEEYNRFKKYDI---- 112

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++    E        G++ +  QK+  L     LPLP          +R++ R++DL 
Sbjct: 113 GDIVGVQGEVF--RTQRGEMSVRVQKVT-LLSKSLLPLPEKFHGLTNTELRYRQRYVDLI 169

Query: 135 -RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
               + +N + R++ I  +R  M A  F+E  TP+L T S    AR F+          Y
Sbjct: 170 VNPEVKRNFIIRSQFIKYVRDFMDARGFMEVETPVLNTISGGATARPFITHHNTLDIDMY 229

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  A +   + L+  G DR ++I   FR+E       P EF  +++  ++ + +D+++ 
Sbjct: 230 -MRIATELPLKRLIVGGMDRVYEIGRIFRNEGMDPKHNP-EFTTIELYQAYADFNDMMDL 287

Query: 253 MENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            E++L    ++      V            + R+   +A+++Y
Sbjct: 288 FEDLLSSAAQKILGTYQVEWQGEKIDLTPGWPRMPMHEAVKKY 330



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 7/129 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           ++   EEK I       TM    +  L K +        +++L     E+ +     +  
Sbjct: 371 FDQKVEEKLIQPTF--ITMHPVDVSPLAKRSPSDPRLTERFELFICHSEMGNAFSELNDP 428

Query: 502 EVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               Q F      ++  ++  G        A + G+PP GG+  GIDR VMLL  + ++R
Sbjct: 429 IDQRQRFQKQVELRDKGDDEAGMMDEDFLTALEYGLPPTGGLGIGIDRCVMLLTNSDSIR 488

Query: 558 EVSLFPMSQ 566
           EV LFP  +
Sbjct: 489 EVILFPTMK 497


>gi|212638975|ref|YP_002315495.1| asparaginyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212560455|gb|ACJ33510.1| Asparaginyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 454

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 75/303 (24%), Positives = 120/303 (39%), Gaps = 32/303 (10%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKS 64
           +  ++    VG  V +  W+   R  G I FL +RD  G  Q V      D   F+ AKS
Sbjct: 28  TIAEVHK-YVGQEVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVEKAQVDEDVFQTAKS 86

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E  L + G+V   +             ELS   IEI+  A + P+     +E+    
Sbjct: 87  MTQESSLYVTGVVREDARSPF-------GYELSVTNIEIIHTAVDYPITP---KEHGVEF 136

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              +R L LR    H  +  R  +I +         F++   PILT S+PEG  +     
Sbjct: 137 LMDHRHLWLRSKRQHAIMKIRNEVIRATYEFFNENGFVKVDPPILTGSAPEGTTELFHTK 196

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             ++ ++  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F 
Sbjct: 197 YFDEDAY--LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFY 253

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRYGTD 289
           + +D L   E  +  + +       +                  F RI YD+AI+     
Sbjct: 254 QFEDNLQVQEQYVSHIVQSVLKHCQLELKTLGRDTSKLENVKPPFARITYDEAIQLLHEK 313

Query: 290 KPD 292
             D
Sbjct: 314 GFD 316



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 26/134 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG--MESLKGNDLLSIKAFQYDLVCNGFE 490
           +  +I  +P                PF M       E +   DL++ + +         E
Sbjct: 338 KPVFITHYP------------TTLKPFYMQPDPNRPEVVLCADLIAPEGYG--------E 377

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R H  +++ Q      +S +  +          Q G  PH G   G++R +  +
Sbjct: 378 IIGGSERIHDYDLLKQRLEEHQLSLDAYK----WYLELRQYGSVPHSGFGLGLERTIAWI 433

Query: 551 LGAKNVREVSLFPM 564
            G ++VRE   FP 
Sbjct: 434 CGVEHVRETIPFPR 447


>gi|120601936|ref|YP_966336.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|120562165|gb|ABM27909.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 501

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 61/292 (20%), Positives = 116/292 (39%), Gaps = 21/292 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +   R  G + F  I D  G  Q  A  +    E  K+ +   +  I G+     
Sbjct: 66  TMAGRIVSHRSFGKVAFFHIMDRTGRMQCYAAREELGEEAYKTFKKLDIGDIVGV----- 120

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHK 140
                    TG++ LS  ++ +L+ +   PLP          IR++ R++DL        
Sbjct: 121 -SGRLFRTKTGELTLSCTEVRLLTKSIR-PLPEKYHGLKDVEIRYRQRYVDLIVTPRARD 178

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
              KRT I+   R  + A  F+E  TP++ A      A+ F+          Y +  AP+
Sbjct: 179 IFRKRTIIVREFRRFLEARGFMEVETPMMQAIPGGATAKPFVTFHNALDMQLY-MRIAPE 237

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF++ F+I   FR+E   +   P EF   +   ++   +D+++  E +   
Sbjct: 238 LYLKRLLVGGFEKVFEINRNFRNEGISTQHNP-EFTMCEFYWAYATFEDLMDLTEELFSH 296

Query: 260 VFEEFSN----------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +  E              +     ++R+ + +++ + G   P+  N      
Sbjct: 297 IAREVCGSSVITYQGQEVDLTPGKWVRLTFHESLEKVGGHSPEFYNDYEKVR 348



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            ++ + E  ++      +  P       + N+       +++L   G E+A+     +  
Sbjct: 371 LFDLDVEP-RLIQPTFIYHYPTDISPLSRRNEQNPDVTDRFELFITGRELANAFSELNDP 429

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F +    KE  ++          RA + GMPP  G   GIDR+VMLL  + ++R
Sbjct: 430 VDQRMRFEDQVKEKEAGDDEAHFMDEDYLRALEYGMPPAAGQGVGIDRLVMLLTDSPSIR 489

Query: 558 EVSLFP 563
           EV LFP
Sbjct: 490 EVILFP 495


>gi|172037197|ref|YP_001803698.1| asparaginyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171698651|gb|ACB51632.1| asparaginyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 463

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 72/366 (19%), Positives = 125/366 (34%), Gaps = 53/366 (14%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           M   R      L        V + GWV   R      F+++ D   +  +    D +   
Sbjct: 1   MQTKRVRDI--LRHGKPDETVTIQGWVRTKRELKEFAFMEVNDGSSLNSLQVVLDESVPN 58

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             +  K + +   + + G ++    +  N       IEL A K+++   ++    P+  +
Sbjct: 59  YQDALKLLNTGASVEVSGTLVQSPGKGQN-------IELKAAKVQVYGTSDPETYPLQKK 111

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           R   E +R     L  R +TL   +  R     ++       +FI   TPI+TAS  EGA
Sbjct: 112 RHSFEFLR-TIGHLRSRTNTLGAVMRVRNACATAIHKFFQERDFIWIHTPIITASDCEGA 170

Query: 178 RDFLVPSRVNQG--------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCF 220
            +    +  + G               F+   A      Q +  +MA  F   +   P F
Sbjct: 171 GELFTVTNFDLGKVPLDKQQKIDYTQDFFGKQAYLTVSGQLEAEVMAMAFQNVYTFGPTF 230

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS--------- 271
           R E+  + R   EF+ ++ EM+F + +   +  E  L+ +F+                  
Sbjct: 231 RAENSNTSRHLAEFWMVEPEMAFCDIEGDQDLAEEFLKYIFKYVLKTCPEDMEFFNKRID 290

Query: 272 ------------NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKI 317
                       N F RI Y  AI             +   +   +EH  +    +F K 
Sbjct: 291 KSVLETADNIINNEFERITYTKAIELLEKSNKKFEYAVEWGIDLQSEHERYLAEELFKKP 350

Query: 318 LSVNPG 323
           L V   
Sbjct: 351 LIVTNY 356



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 4/77 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    +++ +  + +GI  + +           + G  PH G   G +R+V  
Sbjct: 386 EIIGGSQREERLDILEKRINEMGIIPDDLW----WYLDLRRYGTVPHAGFGLGFERVVQF 441

Query: 550 LLGAKNVREVSLFPMSQ 566
           + G  N+R+V  FP + 
Sbjct: 442 MTGMANIRDVIPFPRTP 458


>gi|307152637|ref|YP_003888021.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306982865|gb|ADN14746.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 463

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 77/391 (19%), Positives = 141/391 (36%), Gaps = 52/391 (13%)

Query: 6   THSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE-I 61
           T    + L  +     V + GWV   R   G  F+++ D   +   QVV +P    ++ +
Sbjct: 3   TRRIAEILKQAQPDETVTIGGWVRTKRELKGFAFMEVNDGSSMANLQVVLDPQVPSYDSL 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            + + +   + + G ++    +         +IEL A  + +   A+    P+  +R   
Sbjct: 63  LQQINTGASVVVTGTLVPSPGKG-------QRIELKATSVTLYGEADPETYPLQKKRHSF 115

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R     L  R +TL   +  R    N++        F+   TPI+TA+  EGA +  
Sbjct: 116 EFLR-TIAHLRGRTNTLGAVMRVRNACANAIHRFFQERGFLWVHTPIITANDCEGAGELF 174

Query: 182 VPSRVNQG--------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             + ++                 F+   A      Q +  +MA  F   +   P FR E+
Sbjct: 175 TVTNLDLKKLPRNEQQGIDFSQDFFGKRAYLTVSGQLEAEIMALAFQNVYTFGPTFRAEN 234

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------------ 266
             + R   EF+ ++ EM+F + D   +  E  L+ +F+   +                  
Sbjct: 235 SNTSRHLAEFWMVEPEMAFCDLDGDQDLAEAFLKYIFKSVLDSCLEDMEFFNQRIDNTVL 294

Query: 267 ---GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVN 321
               N ++N F RI Y +AI            P+   +   +EH  +    +F K L V 
Sbjct: 295 ETAENIINNEFGRITYTEAIELLEKADRKFEYPVEWGIDLQSEHERYLAEELFKKPLIVT 354

Query: 322 PGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              +           +      M+  A   G
Sbjct: 355 NYPKDIKAFYMRLNDDNKTVAAMDVLAPKIG 385



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R     V+ +    +G+  E +           + G  PH G   G +R+V  
Sbjct: 386 EIIGGSQREERLNVLEERIKQMGMLPEDLW----WYLDLRRFGTVPHAGFGLGFERVVQF 441

Query: 550 LLGAKNVREVSLFPMSQNFCD 570
           + G  N+R+V  FP +    D
Sbjct: 442 MTGMGNIRDVIPFPRTPLSAD 462


>gi|126180281|ref|YP_001048246.1| lysyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|229559860|sp|A3CY14|SYK_METMJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|125863075|gb|ABN58264.1| lysyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 508

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 72/285 (25%), Positives = 124/285 (43%), Gaps = 20/285 (7%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V  +G V+ VR HG  IF DI D  G  Q+    +    E     +        G ++
Sbjct: 55  EEVSTAGRVYVVRQHGKTIFADIGDSEGRIQLYLRKNDLGEEQFDLFKQY---VDAGDIV 111

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                     +  G+I +   + E+L+ +   PLP           R++ R+LDL  +  
Sbjct: 112 GVVGHVFRTKM--GEITVWVDRFELLTKS-VCPLPEKFHGLKNVETRYRQRYLDLIMNEE 168

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQ 196
            +   + R+RII+ +R  +   +++E  TP L        AR F           Y L  
Sbjct: 169 SRETFRARSRIISLLRQFLFERDYLEFETPTLQPIYGGANARPFTTHHNALDQKLY-LRI 227

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GFD+ F+IA  FR+ED  ++  P EF  +++  ++ + +D++N  E +
Sbjct: 228 APELYLKRLVVGGFDKVFEIAKNFRNEDIDTNHNP-EFTMVEVYEAYRDYNDMMNLTEEI 286

Query: 257 LRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY-GTDKP 291
           L  + E+                S  + R+  ++A+R Y G D P
Sbjct: 287 LSHLAEKVLGTTVCSFAGHDLDFSRPWRRLTMEEAVREYAGIDFP 331



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 4/124 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM---- 504
           EK +      +  P       K +        +++L   G E+A+G    +         
Sbjct: 369 EKHLIQPTFIYDFPIENSPLAKKHRSKEGLTERFELFIAGMEMANGFSELNDPLDQKARL 428

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            Q  +         +        A   GMPP GG+  GIDR+VMLL G  +++EV LFP 
Sbjct: 429 EQQDAKRRKGDLEAQMIDYDFINALGYGMPPTGGVGIGIDRLVMLLTGKDSIKEVLLFPQ 488

Query: 565 SQNF 568
            +  
Sbjct: 489 MKTA 492


>gi|171741192|ref|ZP_02916999.1| hypothetical protein BIFDEN_00264 [Bifidobacterium dentium ATCC
           27678]
 gi|283455445|ref|YP_003360009.1| lysyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|306823487|ref|ZP_07456862.1| lysine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309802618|ref|ZP_07696722.1| lysine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|171276806|gb|EDT44467.1| hypothetical protein BIFDEN_00264 [Bifidobacterium dentium ATCC
           27678]
 gi|283102079|gb|ADB09185.1| lysS Lysyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|304553194|gb|EFM41106.1| lysine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308220682|gb|EFO76990.1| lysine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 558

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 110/568 (19%), Positives = 198/568 (34%), Gaps = 122/568 (21%)

Query: 5   RTHSCGDLGVSDVGSFVR-LSGWVHRVRPHGGIIFLDIR--DHYGITQVVANPDSACFEI 61
           R    G L   D    V  ++G V  +R  GG+ F+ +   D   I  +++  +      
Sbjct: 98  RAKYDGKLEAGDETEDVVGIAGRVLFLRNAGGLCFVQLSAGDGTKIQGMISKKEIG---- 153

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S++    L   G  +      I +   TG++ + A +  I + A +    +   ++  
Sbjct: 154 ADSLKQFKQLVDLGDHLFIKGRVIASK--TGELSVFATEWAIAAKALQPLPAL--HKDLN 209

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           E  R +  ++ +  D   +N+V+ R++ + S+R      +FIE  TP+L T      AR 
Sbjct: 210 EDTRTRKPYIGMIADEKIRNMVRNRSKAVASLRKTFADHDFIEVETPMLQTVHGGAAARP 269

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           Y L  AP+ + +  +  G DR F+I   FR+E   +   P EF  ++ 
Sbjct: 270 FTTHMNAFDLDLY-LRIAPELFLKRCLVGGIDRVFEINRDFRNEGADATHAP-EFTMVEA 327

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++   D I   ++ +++                     D A+  +G+ K      + +
Sbjct: 328 YQAYGNYDTIGALVKQLVQ---------------------DTAMDVFGSHK------VTL 360

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            + TE+ +  E++  S   S++       +P  G        + + E A   G       
Sbjct: 361 LDGTEYDLGGEWKTISMYDSLSEALGEEIVPNGGPDNPGTSVEHLGEIADRLG------- 413

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                E  +V   G + +HL                                        
Sbjct: 414 ----VERDDVENHGKLVEHLWEH------------------------------------- 432

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
                       +E  ++ DFP      E   +   H                   +   
Sbjct: 433 ------FYEDKLYEPTFVRDFPV-----ETSPLVKGHR----------------SKAGVV 465

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPP 535
            ++DL   GFE+A+G    +   V  + F     +    +            A   GMPP
Sbjct: 466 EKWDLYVRGFELATGYSELNDPVVQRERFVAQAKAALAGDEEACDIDEDFLEALGVGMPP 525

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG+  GIDR+++ L GA  +RE   FP
Sbjct: 526 AGGMGMGIDRLLIALTGA-TIRETITFP 552


>gi|266626100|ref|ZP_06119035.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288861994|gb|EFC94292.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 192

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 92/193 (47%), Positives = 133/193 (68%), Gaps = 2/193 (1%)

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
             +  E +R KYR+LDLRR  + +NI+ R++     R  +  E F E  TP L  S+PEG
Sbjct: 2   NSKTKEELRLKYRYLDLRRPDIQRNIMVRSQAAIITRAFLAEEGFFEIETPTLIKSTPEG 61

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           ARD+LVPSRV+ GSFYALPQ+PQ +KQLLM SG+DRYFQ+A C+RDED R+DR P EF Q
Sbjct: 62  ARDYLVPSRVHPGSFYALPQSPQLFKQLLMCSGYDRYFQLARCYRDEDLRADRQP-EFTQ 120

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +D+E+SFV+ +D+L+  E +L+ +F+E  N + +     R+ + +A+ R+G+DKPDLR  
Sbjct: 121 IDLELSFVDVEDVLDVNERLLKRLFKEICNFD-LELPIPRMTWHEAMDRFGSDKPDLRFG 179

Query: 297 IIMHNVTEHFVHS 309
           + + NV++     
Sbjct: 180 MELKNVSDVVRGC 192


>gi|322418264|ref|YP_004197487.1| lysyl-tRNA synthetase [Geobacter sp. M18]
 gi|320124651|gb|ADW12211.1| lysyl-tRNA synthetase [Geobacter sp. M18]
          Length = 492

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 67/302 (22%), Positives = 124/302 (41%), Gaps = 19/302 (6%)

Query: 7   HSCGDLGVSDVGSFV--------RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           H+  DL  +     V         ++G +   R  G   F+ ++D  G  Q+    D+  
Sbjct: 34  HTSADLRDAYGDKEVIEENPQTFVVAGRIIMRRSFGKAAFVQVQDRKGRMQLYMKKDTLG 93

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E+     +  +  I G      A        TG++ L+   + +L+ +  LPLP     
Sbjct: 94  EELFAEFENYDIGDIIG------ATGTPFRTKTGELSLAVSSVRLLTKSL-LPLPEKFHG 146

Query: 119 EYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                 R++ R++DL     + +   KR+RI+  +R  M  ++F+E  TP++        
Sbjct: 147 LTDVETRYRQRYVDLIVSPEVREVFYKRSRIVQLIREFMTRKDFLEVETPMMQQIPGGAT 206

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  
Sbjct: 207 AKPFVTHHNALDMELF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTM 264

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           ++   ++   +D++N  E +L  V +E       +     I +    +R+   +  L   
Sbjct: 265 MEFYQAYATFEDLMNFTEELLCHVTQELLGTLDFTYGGEPISFQRPWKRFTVKEAILEYG 324

Query: 297 II 298
            I
Sbjct: 325 DI 326



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 7/130 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           +E   E K I       T     +  L + +D       +++  C G E+A+     +  
Sbjct: 362 FEEVAEAKLIQPTF--ITNYPTEVSPLSRKSDHDPEYVDRFEFFCAGREMANAFSELNDP 419

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F     +K+  +           RA + G+PP  G   GIDR+VMLL  + ++R
Sbjct: 420 RDQKERFLAQVAAKDKGDEEAHYMDEDYIRALEYGLPPTAGEGIGIDRLVMLLTDSPSIR 479

Query: 558 EVSLFPMSQN 567
           +V LFP  + 
Sbjct: 480 DVILFPQLRK 489


>gi|226309769|ref|YP_002769663.1| lysyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226092717|dbj|BAH41159.1| lysyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 506

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 64/354 (18%), Positives = 138/354 (38%), Gaps = 35/354 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   D+  +               V ++G +   R  G   F  + D  G  Q+    D
Sbjct: 46  THHAADITKAFSEKSKEELEAEENVVTIAGRLMAKRGMGKASFAQLLDRSGQIQIYVRQD 105

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +   E++K      +  + G+        +     TG++ + A+++  L+ +   PLP  
Sbjct: 106 TVGEELSKVFDLADIGDMIGV------TGVVFKTKTGELSVKAKELSYLTKSLR-PLPEK 158

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                    R++ R++DL  +   ++  + R+RI+ SMR  +    ++E  TP L A + 
Sbjct: 159 YHGLKDIETRYRKRYVDLIVNPEVRDTFITRSRILTSMRRYLDNLGYLEVETPTLHAIAG 218

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y +  A + + + L+  G ++ ++I   +R+E   +   P E
Sbjct: 219 GASARPFITHHNALDMQLY-MRIAIELHLKRLIVGGLEKVYEIGRVYRNEGISTRHNP-E 276

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E ++  + +E      +      I      RR        
Sbjct: 277 FTMIELYEAYADYQDIMSLTEEMVAHIAQEVLGTMKIQYQGNEIDLTPKWRR-------- 328

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
              + M ++ +  +  +   F K +S +    +          +  F   +NE+
Sbjct: 329 ---VHMVDLIKENLGVD---FWKEMSDDEARALAKEHGVSVEPHHTFGHVVNEF 376



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 6/155 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E G+       F  +++  F+E  + E  +      +  P       K ND    
Sbjct: 353 RALAKEHGVSVEPHHTFGHVVN-EFFEQ-KLEHTLIQPTFVYGHPVAISPLAKKNDQDPR 410

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
              +++L     E A+     +      + F    + KE       +       A + GM
Sbjct: 411 FTDRFELFIVAREHANAFTELNDPIDQRERFEAQLLEKEAGNDEAHDMDDDFIEALEYGM 470

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PP GG+  GIDR+VMLL  + ++R+V LFP  +N 
Sbjct: 471 PPTGGLGIGIDRLVMLLTNSPSIRDVLLFPHMRNR 505


>gi|325144654|gb|EGC66952.1| lysyl-tRNA synthetase [Neisseria meningitidis M01-240013]
 gi|325204413|gb|ADY99866.1| lysyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 503

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      EI     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEILDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E ++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNERYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    +S N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTAKISYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F      K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|289580752|ref|YP_003479218.1| aspartyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530305|gb|ADD04656.1| aspartyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 434

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 86/349 (24%), Positives = 152/349 (43%), Gaps = 43/349 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++      ++ G    ++GWVH +R  GGI FL +RD  G  QV    D    E+  +
Sbjct: 4   RTYTAD----AEPGDDATVAGWVHEIRDLGGIAFLILRDATGKIQVKFEKDEMDDELVDT 59

Query: 65  ---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
              V  E V+ + G V             TG +E++ + ++++S A+   PL   G+ + 
Sbjct: 60  GLGVSRESVVSVTGTVEEEP------RAPTG-VEVTPESVDVISAADPELPLDPSGKVDA 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
             S R   R LDLR+D +      R  I+ ++R +       E +TP + A+  EG  + 
Sbjct: 113 DLSTRLDNRTLDLRKDEVQAVFEIRAEILRAVREQFREFYCTEINTPKIVATGTEGGTEL 172

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F    Q+PQ +KQL+  S  +R F+I P FR E+  + R   E   +D E
Sbjct: 173 FPITYFGEEAFMN--QSPQLFKQLIAGSNVERVFEIGPIFRAEEHNTPRHLNEATSIDFE 230

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN--------------TVSNNFLRICYDDAIRR- 285
            +F +Q+D ++  E +++  +E  +                     +F R+ Y++AI R 
Sbjct: 231 GAFCDQNDAMDVAEGIVKAAYEAVTENCSEELEALGLEEEFEVPEGDFPRLSYEEAIERI 290

Query: 286 -----------YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
                      +G D P      +  +V  H+  +++    K   +   
Sbjct: 291 NATGELDEQLVWGDDLPTEGEKALGDDVGGHYFITDWPSEIKPFYIKDH 339



 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 13/144 (9%)

Query: 433 EFCWIMDFPFYEWNEEEKKI--DFAHNPFTMPQGGMES---LKGNDLLSIKAFQYDLVCN 487
           +  W  D P     E EK +  D   + F            +K +D     +  +DL+  
Sbjct: 299 QLVWGDDLP----TEGEKALGDDVGGHYFITDWPSEIKPFYIKDHDDDEQLSTGFDLMHP 354

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             E+ SGG R H  E +++ F   G+      ++F    + F+ GMPPH G   G +R++
Sbjct: 355 RMELVSGGQREHRHEHLIEGFEQQGLDP----DQFEYYTKMFKYGMPPHAGFGLGGERLI 410

Query: 548 MLLLGAKNVREVSLFPMSQNFCDL 571
           M +LG  N+RE  LFP  +     
Sbjct: 411 MTILGLDNIREAVLFPRDRQRLSP 434


>gi|188997502|ref|YP_001931753.1| lysyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932569|gb|ACD67199.1| lysyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 577

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 70/331 (21%), Positives = 130/331 (39%), Gaps = 21/331 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +  +R  G   F  I+D  G  QV  N D    E  K  ++  ++ I  ++ 
Sbjct: 138 KQVAVAGRLIALRDQGKAAFGHIQDSDGKLQVYFNADILGEENYK--KAMDLIDIGDII- 194

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               E      +TG++ +     EIL+ +   PLP           R++YR+LDL  +  
Sbjct: 195 --GVEGHLFRTMTGELTVEVHNYEILAKSLR-PLPEKWHGLKDTEYRYRYRYLDLIANQR 251

Query: 139 HKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQ 196
            + I   R++ I S+R  + ++ FIE  TPIL   +    A+ F+        + Y L  
Sbjct: 252 TREIFKIRSKAIKSLREFLESKGFIEVETPILQPVASGAMAKPFITYHNALDMNLY-LRI 310

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y ++L+  GF+R F+I   FR+E   +   P EF  ++   ++++ +D++   E +
Sbjct: 311 APELYLKMLVVGGFNRVFEIGRNFRNEGIDTTHNP-EFTMVEFYAAYLDYNDLMALTEEL 369

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
            R +  +                         D       +   +  +     +   F  
Sbjct: 370 FRKILLDTVG-----------TLKITWEGQELDFEKPFRKVAFFDALKQKTGKDKEFFLD 418

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
                   +   IP      +    D++ E 
Sbjct: 419 FEKARNFAKEVGIPKADTLTHVKILDKLFEH 449



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 68/172 (39%), Gaps = 9/172 (5%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+     G   +F      ARN  A+E+GI   +      I+D   +E   EE  I    
Sbjct: 403 DALKQKTGKDKEFFLDFEKARN-FAKEVGIPKADTLTHVKILDK-LFEHFVEEDLIQPTF 460

Query: 457 NP-FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF----SNV 511
              F      +     ND   +   +++L+ N  E+A+     +      + F       
Sbjct: 461 VIDFPKILSPLAKTHRNDPDLV--ERFELIINKKELANAYTELNDPMDQRERFIQQIREK 518

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  E   +       A + G+PP  G   GIDR+VM+L    ++REV LFP
Sbjct: 519 EMGDEEAMDIDETFLTALEYGLPPTAGEGIGIDRLVMMLTDNYSIREVILFP 570


>gi|290580761|ref|YP_003485153.1| lysyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254997660|dbj|BAH88261.1| lysyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 496

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 131/359 (36%), Gaps = 32/359 (8%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             D+     ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTATSGQLKEKYADKTKEELHDINETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   +  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DTVGDDNYQIFKKADI----GDFLGVEGEIMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +    +  + R++II+ +R  +    F+E  TP+L   +
Sbjct: 150 KFHGLTDVETIYRKRYLDLISNRESLERFITRSKIISEIRRYLDGLGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A          Q     L  A + + + L+  G +R +++   FR+E   +   P E
Sbjct: 210 GGAAAKPFTTHHNAQDMDMVLRIATELHLKRLIVGGMERVYEMGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ + +DI++  E +++           ++     I  ++  +R        
Sbjct: 269 FTSIEVYQAYADFEDIMDLTEGIVQHAATAVKGDGPITYQGTEIKINEPFKRAH------ 322

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARS 350
                + ++ +     +F     +       +   +P +    +          E+   
Sbjct: 323 -----IVDLIKEVTGVDFWKEMTLAEAQALAQEKNVPLEKHYTSVGHIINAFFEEFVEE 376



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  I          +    + K  D       +++L     E  +     +  
Sbjct: 369 FFEEFVEETLIQPIFVYGHPVEVSPLAKKNAD-DPRFTDRFELFIMTKEYGNAFTELNDP 427

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
              L+ F     +KE+ ++   G       A + GMPP GG+  GIDR+VMLL     +R
Sbjct: 428 IDQLERFKAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIR 487

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 488 DVLLFPTMK 496


>gi|78183738|ref|YP_376172.1| lysyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|123729968|sp|Q3B0J9|SYK_SYNS9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78168032|gb|ABB25129.1| Lysyl-tRNA synthetase, class-2 [Synechococcus sp. CC9902]
          Length = 502

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 63/357 (17%), Positives = 126/357 (35%), Gaps = 28/357 (7%)

Query: 6   THSCGDLGVSDV----GSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           +H   +L         G      V ++G V   R  G + F  + D  G  Q+       
Sbjct: 30  SHRMAELQADHADLPNGEERELSVAVAGRVMTRRVMGKLAFFTLADETGTIQLFLEKAGL 89

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             +     +    L   G  +  S      +   G++ +  +   +LS + + PLP    
Sbjct: 90  EAQQEGWFKQITSLVDAGDWLGVSGTLRRTD--RGELSVKVRDWRMLSKSLQ-PLPDKWH 146

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRI-INSMRCRMIAENFIECSTPILTASSPEG 176
                  R++ R+LDL      +   +R  + ++ +R  +    F+E  TP+L + +   
Sbjct: 147 GLADVEKRYRQRYLDLIVSPQSRETFRRRALLVSGIRRWLDERQFLEIETPVLQSEAGGA 206

Query: 177 -ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+          Y L  A + + + L+  GF+R +++   FR+E   +   P EF 
Sbjct: 207 DARPFITHHNTLDLPLY-LRIATELHLKRLVVGGFERVYELGRIFRNEGMSTRHNP-EFT 264

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            +++  ++ +   ++   E ++  V ++   G  +      I      RR          
Sbjct: 265 SVEVYQAYSDYIGMMELTEAMIAEVCQQVCGGTRIHYQGTDIDLTPPWRR---------- 314

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARS 350
              MH + E      F  F+         E   +   G   +  R   +   +   +
Sbjct: 315 -ATMHELVEEATGLNFEAFTTRAQAAEAMEAAGLEVPGAADSVGRLLNEAFEQRVEA 370



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 56/173 (32%), Gaps = 28/173 (16%)

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                    N   ++   +  +  +  ++ D+P      E   +   H            
Sbjct: 352 AADSVGRLLNEAFEQ--RVEASLIQPTFVTDYPI-----EISPLARKHR----------- 393

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGG 524
                       +++L   G E A+            Q        K       +     
Sbjct: 394 -----SKPGLVERFELFIVGRETANAFSELIDPVDQRQRLEAQQARKAAGDLEAQGLDED 448

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
              A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+ +        +PS
Sbjct: 449 FVHALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLMRPESRP-DEAPS 500


>gi|193083965|gb|ACF09640.1| asparaginyl-tRNA synthetase [uncultured marine crenarchaeote
           AD1000-56-E4]
          Length = 436

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 12/295 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H   DL  S  GS V + GW+  +R HG I FL + D  G  Q+VA   ++  ++ +S
Sbjct: 11  RSHYSKDLDASMEGSDVTIMGWISSIRGHGNITFLTLVDKMGAIQIVAKKGTSPDDLVQS 70

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPES 123
           +         GL+         +      IE+S + + I S  E+  P     +      
Sbjct: 71  ISKLKEHSSIGLI----GTVKTSEKAPNGIEISPKDLRIFSSVEKIPPFDPHAKTVKNID 126

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R + R +DLRR+TL +    R+ ++ S+R      NF E +TP + A++ EG       
Sbjct: 127 TRLEIRAIDLRRNTLQQVFKARSNVLKSIRQYFYDHNFTEINTPKMIATATEGGAALFPI 186

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              N+ +F A  Q+PQ YK+ L  S F++ F+IAP FR E  R++R   E   +D E ++
Sbjct: 187 FYYNKEAFLA--QSPQLYKEQLTMS-FEKVFEIAPIFRAEPSRTNRHLSEAISIDFEEAY 243

Query: 244 VEQDDILNTMENVLRG---VFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
           V+ +D+++ +  +++      +EFS + + V      I        Y      +R
Sbjct: 244 VDYNDVMSRIGQIIKQTILTMQEFSKDNDDVEFTIPEISDTIPQYTYSDLLEKIR 298



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 24/132 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
           F +I D+P                PF         +K ++     +  +DL+    E++S
Sbjct: 323 FYFIKDWP------------VGPKPFY--------VKVSNDNPKISESFDLMYGDLELSS 362

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  R      +     N G+      + FG     F  G+PPH G   G++R++M L G 
Sbjct: 363 GSTRIAKKSELEDRMKNKGMKI----DTFGYHLGVFDYGVPPHAGCGIGLERLMMALTGI 418

Query: 554 KNVREVSLFPMS 565
            N+R+ + +P  
Sbjct: 419 DNIRDTTFYPRD 430


>gi|23466201|ref|NP_696804.1| lysyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|189440639|ref|YP_001955720.1| lysyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|227546547|ref|ZP_03976596.1| lysyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|322691799|ref|YP_004221369.1| lysyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217]
 gi|23326943|gb|AAN25440.1| lysyl-tRNA synthetase 1 [Bifidobacterium longum NCC2705]
 gi|189429074|gb|ACD99222.1| Lysyl-tRNA synthetase class II [Bifidobacterium longum DJO10A]
 gi|227212864|gb|EEI80743.1| lysyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|320456655|dbj|BAJ67277.1| lysyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217]
          Length = 560

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 108/563 (19%), Positives = 197/563 (34%), Gaps = 125/563 (22%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANPDSACFEIAKSVR 66
            G+     VG    ++G V  +R  GG+ F+ +   D   I  +++  +      A S++
Sbjct: 108 AGEETEDMVG----IAGRVLFLRNAGGLCFVQLSAGDGTKIQGMISKKEIG----ADSLK 159

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G  +      I +   TG++ + A +  I S A +    +   ++  E  R 
Sbjct: 160 QFKQLVDLGDHLYLKGRVIASK--TGELSVFATEWAIASKALQPLPAL--HKDLNEDTRT 215

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           +  ++ +  D   +N+V+ R++ + S+R      +F+E  TP+L        AR F    
Sbjct: 216 RKPYIGMIADENIRNMVRNRSKAVASLRRTFDDHDFLEVETPMLQTLHGGAAARPFTTHM 275

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ + +  +  G DR F+I   FR+E   +   P EF  ++   ++ 
Sbjct: 276 NAFDLDLY-LRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYG 333

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             D I   ++ +++                       A+  YG+ K      + + + TE
Sbjct: 334 TYDSIGQLVKELVQK---------------------TAMDVYGSHK------VTLLDGTE 366

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +    E++  S   S++       +P  G                    PG         
Sbjct: 367 YDFGGEWKTISMYDSLSESLGEEIVPNGGPD-----------------APGT-------- 401

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
              +V  +G +A  L +        R D+++                       H+ +  
Sbjct: 402 ---SVEHLGAIADKLGVE-------RDDVENH-----------------GKLVEHLWEHF 434

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                  +E  ++ DFP      E   +   H                        ++DL
Sbjct: 435 --YEDKLYEPTFVRDFPV-----ETSPLVKGHR----------------TKPGVVEKWDL 471

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIA 540
              GFE+A+G    +   V  + F          +            A   GMPP GG+ 
Sbjct: 472 YVRGFELATGYSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMG 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            GIDR+++ L GA  +RE   FP
Sbjct: 532 MGIDRLLIALTGA-TIRETITFP 553


>gi|46450201|gb|AAS96849.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
          Length = 501

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 61/292 (20%), Positives = 116/292 (39%), Gaps = 21/292 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +   R  G + F  I D  G  Q  A  +    E  K+ +   +  I G+     
Sbjct: 66  TMAGRIVSHRSFGKVAFFHIMDRTGRMQCYAAREELGEEAYKTFKKLDIGDIVGV----- 120

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHK 140
                    TG++ LS  ++ +L+ +   PLP          IR++ R++DL        
Sbjct: 121 -SGRLFRTKTGELTLSCTEVRLLTKSIR-PLPEKYHGLKDVEIRYRQRYVDLIVTPRARD 178

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
              KRT I+   R  + A  F+E  TP++ A      A+ F+          Y +  AP+
Sbjct: 179 IFRKRTIIVREFRRFLEARGFMEVETPMMQAIPGGATAKPFVTFHNALDMQLY-MRIAPE 237

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF++ F+I   FR+E   +   P EF   +   ++   +D+++  E +   
Sbjct: 238 LYLKRLLVGGFEKVFEINRNFRNEGISTQHNP-EFTMCEFYWAYATFEDLMDLTEELFSH 296

Query: 260 VFEEFSN----------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +  E              +     ++R+ + +++ + G   P+  N      
Sbjct: 297 IAREVCGSSVITYQGQEVDLTPGKWVRLTFHESLEKVGGHSPEFYNDYEKVR 348



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            ++ + E  ++      +  P       + N+       +++L   G E+A+     +  
Sbjct: 371 LFDLDVEP-RLIQPTFIYHYPTDISPLSRRNEQNPDVTDRFELFITGRELANAFSELNDP 429

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F +    KE  ++          RA + GMPP  G   GIDR+VMLL  + ++R
Sbjct: 430 VDQRMRFEDQVKEKEAGDDEAHFMDEDYLRALEYGMPPAAGQGVGIDRLVMLLTDSPSIR 489

Query: 558 EVSLFP 563
           EV LFP
Sbjct: 490 EVILFP 495


>gi|325205820|gb|ADZ01273.1| lysyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 503

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    ++ N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F      K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|296454791|ref|YP_003661935.1| lysyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301]
 gi|296184223|gb|ADH01105.1| lysyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301]
          Length = 560

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 103/563 (18%), Positives = 188/563 (33%), Gaps = 125/563 (22%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANPDSACFEIAKSVR 66
            G+     VG    ++G V  +R  GG+ F+ +   D   I  +++  +      A S++
Sbjct: 108 AGEETEDMVG----IAGRVLFLRNAGGLCFVQLSAGDGTKIQGMISKKEIG----ADSLK 159

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G  +      I +   TG++ + A +  I S A +    +   ++  E  R 
Sbjct: 160 QFKQLVDLGDHLYLKGRVIASK--TGELSVFATEWAIASKALQPLPAL--HKDLNEDTRT 215

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           +  ++ +  D   +N+V+ R++ + S+R      +F+E  TP+L        AR F    
Sbjct: 216 RKPYIGMIADENIRNMVRNRSKAVASLRRTFDDHDFLEVETPMLQTLHGGAAARPFTTHM 275

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ + +  +  G DR F+I   FR+E   +   P EF  ++   ++ 
Sbjct: 276 NAFDLDLY-LRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYG 333

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             D I   ++ +++    +    +                            + + + TE
Sbjct: 334 TYDSIGQLVKELVQKTAMDVFGSH---------------------------KVTLLDGTE 366

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +    E++  S   S++       +P  G        + + E A   G            
Sbjct: 367 YDFGGEWKTISMYDSLSEALGEQIVPNGGPDNPGTSVEHLGEIADKLG-----------V 415

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E  +V   G + +HL                                             
Sbjct: 416 ERDDVENHGKLVEHLWEH------------------------------------------ 433

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                  +E  ++ DFP      E   +   H                        ++DL
Sbjct: 434 -FYEDKLYEPTFVRDFPV-----ETSPLVKGHR----------------TKPGVVEKWDL 471

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIA 540
              GFE+A+G    +   V  + F          +            A   GMPP GG+ 
Sbjct: 472 YVRGFELATGYSELNDPVVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMG 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            GIDR+++ L GA  +RE   FP
Sbjct: 532 MGIDRLLIALTGA-TIRETITFP 553


>gi|311234489|gb|ADP87343.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 527

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 61/292 (20%), Positives = 116/292 (39%), Gaps = 21/292 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +   R  G + F  I D  G  Q  A  +    E  K+ +   +  I G+     
Sbjct: 92  TMAGRIVSHRSFGKVAFFHIMDRTGRMQCYAAREELGEEAYKTFKKLDIGDIVGV----- 146

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHK 140
                    TG++ LS  ++ +L+ +   PLP          IR++ R++DL        
Sbjct: 147 -SGRLFRTKTGELTLSCTEVRLLTKSIR-PLPEKYHGLKDVEIRYRQRYVDLIVTPRARD 204

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
              KRT I+   R  + A  F+E  TP++ A      A+ F+          Y +  AP+
Sbjct: 205 IFRKRTIIVREFRRFLEARGFMEVETPMMQAIPGGATAKPFVTFHNALDMQLY-MRIAPE 263

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF++ F+I   FR+E   +   P EF   +   ++   +D+++  E +   
Sbjct: 264 LYLKRLLVGGFEKVFEINRNFRNEGISTQHNP-EFTMCEFYWAYATFEDLMDLTEELFSH 322

Query: 260 VFEEFSN----------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +  E              +     ++R+ + +++ + G   P+  N      
Sbjct: 323 IAREVCGSSVITYQGQEVDLTPGKWVRLTFHESLEKVGGHSPEFYNDYEKVR 374



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            ++ + E  ++      +  P       + N+       +++L   G E+A+     +  
Sbjct: 397 LFDLDVEP-RLIQPTFIYHYPTDISPLSRRNEQNPDVTDRFELFITGRELANAFSELNDP 455

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F +    KE  ++          RA + GMPP  G   GIDR+VMLL  + ++R
Sbjct: 456 VDQRMRFEDQVKEKEAGDDEAHFMDEDYLRALEYGMPPAAGQGVGIDRLVMLLTDSPSIR 515

Query: 558 EVSLFP 563
           EV LFP
Sbjct: 516 EVILFP 521


>gi|320547204|ref|ZP_08041498.1| lysine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320448191|gb|EFW88940.1| lysine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 500

 Score =  202 bits (515), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 64/338 (18%), Positives = 123/338 (36%), Gaps = 26/338 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             ++     ++G +   R  G + F  I+D  G  Q+    
Sbjct: 41  RTATSGQLKEKYSDKTKEELHEINETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRK 100

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 101 DAVGDENYQIFKKADL----GDFLGIEGEVMRTDM--GELTIKATHITHLSKALR-PLPE 153

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +    F+E  TP+L   +
Sbjct: 154 KFHGLTDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYLDGLGFLEVETPVLHNEA 213

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    V     Q     L  A + + + L+  G ++ ++I   FR+E   +   P E
Sbjct: 214 GGAAARPFVTHHNAQDMDMVLRIALELHLKRLIVGGMEKVYEIGRVFRNEGMDATHNP-E 272

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP-- 291
           F  +++  ++ +  DI++  E +++      +    ++     I  D   +R        
Sbjct: 273 FTMIELYQAYADFKDIMDITEGIIQNASAAVNGNGPITYQGTEIAIDKPFKRIHMVDAIK 332

Query: 292 -----DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
                D    + +    E        V     SV    
Sbjct: 333 EVTGVDFWKEMTLEEAQELAKEKNVPVEKHFTSVGHII 370



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 7/154 (4%)

Query: 418 NHIAQELGIINCNCFEFC-WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             +A+E  +     F     I++  F E+ EE   +      +  P       K N    
Sbjct: 349 QELAKEKNVPVEKHFTSVGHIINAFFEEFVEET--LTQPTFVYGHPVEVSPLAKKNAEDP 406

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCG 532
               +++L     E  +     +     L  F     +KE+ ++   G       A + G
Sbjct: 407 RFTDRFELFIMTKEYGNAYSELNDPIDQLARFEAQAKAKELGDDEATGVDYDYVEALEYG 466

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP GG+  GIDR+VMLL     +R+  LFP  +
Sbjct: 467 MPPTGGLGIGIDRLVMLLTDTTTIRDALLFPTMK 500


>gi|254805207|ref|YP_003083428.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254668749|emb|CBA06609.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 503

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    ++ N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score =  100 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F +    K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|171780089|ref|ZP_02920993.1| hypothetical protein STRINF_01877 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281437|gb|EDT46872.1| hypothetical protein STRINF_01877 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 496

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 64/338 (18%), Positives = 123/338 (36%), Gaps = 26/338 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             ++     ++G +   R  G + F  I+D  G  Q+    
Sbjct: 37  RTATSGQLKEKYADKTKEELHEINKTATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGDENYQIFKKADL----GDFLGIEGEIMRTDM--GELTIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +    F+E  TP+L   +
Sbjct: 150 KFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISGIRRYLDGLGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    V     Q     L  A + + + L+  G ++ ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFVTHHNAQDMDMVLRIALELHLKRLIVGGMEKVYEIGRVFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP-- 291
           F  +++  ++ +  DI++  E +++      +    ++     I  D   +R        
Sbjct: 269 FTMIELYEAYADFKDIMDITEGIIQNASAAVNGNGPITYQGTEIAIDQPFKRIHMVDAIK 328

Query: 292 -----DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
                D    + +    E        V     SV    
Sbjct: 329 EVTGVDFWKEMTLEEAQELAKEKNVPVEKHFTSVGHII 366



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 7/154 (4%)

Query: 418 NHIAQELGIINCNCFEFC-WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             +A+E  +     F     I++  F E+ EE   +      +  P       K N   +
Sbjct: 345 QELAKEKNVPVEKHFTSVGHIINAFFEEFVEET--LIQPTFVYGHPVEVSPLAKKNAEDT 402

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCG 532
               +++L     E  +     +     L  F     +KE+ ++   G       A + G
Sbjct: 403 RFTDRFELFIMTKEYGNAYSELNDPIDQLSRFEAQAKAKELGDDEATGVDYDYVEALEYG 462

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP GG+  GIDR+VMLL     +R+  LFP  +
Sbjct: 463 MPPTGGLGIGIDRLVMLLTDTTTIRDALLFPTMK 496


>gi|113955017|ref|YP_729353.1| lysyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123132786|sp|Q0IDW9|SYK_SYNS3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|113882368|gb|ABI47326.1| lysyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 489

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 61/338 (18%), Positives = 130/338 (38%), Gaps = 30/338 (8%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVLCIDGL 76
            V ++G V   R  G + F  + D  G  Q+     +     A+    V +  ++ + G+
Sbjct: 52  KVSVAGRVMTRRVMGKLAFFTLADETGTIQLFLEKATLGDSFAQLSSLVDAGDLIGVHGI 111

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G++ +   K E+L+ + + PLP           R++ R+LDL   
Sbjct: 112 LRRTDR---------GELSVKVSKWEMLTKSLQ-PLPDKWHGLADVEKRYRQRYLDLIVT 161

Query: 137 TLHKNIVKRTRI-INSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYAL 194
              +   +R  + ++++R  +   +F+E  TP+L + +    AR F+          Y L
Sbjct: 162 PQSRETFRRRAMAVSAIRRWLDERDFLEIETPVLQSEAGGAEARPFITHHNTLDLPLY-L 220

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  GF+R +++   FR+E   +   P EF  +++  ++ + +D++   E
Sbjct: 221 RIATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP-EFTSVEVYQAYADYNDMMTLTE 279

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
            ++  V E+      +S   + +    + RR             MH + +     +F  F
Sbjct: 280 QLIASVCEQVCGTTRISYQGVEVDLTPSWRR-----------ATMHELVQEATGLDFTSF 328

Query: 315 SKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARS 350
               +         +PA        R   +        
Sbjct: 329 ETREAAVEAMRAANLPAPDKADTVGRLLNEAFEHAVEP 366



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 66/196 (33%), Gaps = 41/196 (20%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
             +    EA    +   +                   +A  H       +  N  +  ++
Sbjct: 325 FTSFETREAAVEAMRAAN----LPAPDKADTVGRLLNEAFEHA------VEPNLIQPTFV 374

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           +D+P     +E   +   H                        +++L   G E A+    
Sbjct: 375 LDYP-----QEISPLARKHR----------------SKPGLVERFELFIVGRETANAFSE 413

Query: 498 NHMS-------EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
                      E+  +  +   +    V+  F    +A + GMPP GG+  GIDR+VMLL
Sbjct: 414 LTDPLDQRGRMELQQERRAAGDVEASGVDEDF---IQALEVGMPPTGGLGIGIDRLVMLL 470

Query: 551 LGAKNVREVSLFPMSQ 566
             + ++R+V  FP+ +
Sbjct: 471 TDSPSIRDVIAFPLMR 486


>gi|325201876|gb|ADY97330.1| lysyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325208371|gb|ADZ03823.1| lysyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 503

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    ++ N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIIDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F +    K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|313667866|ref|YP_004048150.1| lysyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313005328|emb|CBN86761.1| lysyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 503

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    ++ N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F      K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|124021897|ref|YP_001016204.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|166229815|sp|A2C629|SYK_PROM3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123962183|gb|ABM76939.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 508

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 65/359 (18%), Positives = 136/359 (37%), Gaps = 29/359 (8%)

Query: 6   THSCGDLGVSDV----GSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           +H   +L         G      V ++G V   R  G + F  + D  G  Q+  +  + 
Sbjct: 38  SHRTANLQADHADLAKGEERLLSVSVAGRVMARRVMGKLAFYTLADETGTIQLYLDKATI 97

Query: 58  CFEIAKSVRSEWVLCIDGLVMS---RSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
               +  + S   + +  LV +        +      G++ +  Q+ +ILS + + PLP 
Sbjct: 98  DAAASNELASGTFVQLTTLVDAGDWIGVTGVLRRTDRGELSVKVQQWQILSKSLQ-PLPD 156

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAENFIECSTPILTASS 173
                     R++ R+LDL      +   +R   +++++R  +    F+E  TP+L A +
Sbjct: 157 KWHGLADVEKRYRQRYLDLIVSPQSRETFRRRALMVSAIRRWLDDRAFLEIETPVLQAEA 216

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  GF+R +++   FR+E   +   P 
Sbjct: 217 GGAEARPFITHHNTLDLPLY-LRIATELHLKRLVVGGFERVYELGRIFRNEGMSTRHNP- 274

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  D++   E ++  V  +      ++   + I      RR       
Sbjct: 275 EFTSVEVYQAYADYIDMMVLTEQLISSVCTQICGSTRITYQGIEIDLTPPWRR------- 327

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSK--ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
                 MH + +     +F  F+   + +         +P+K     R   +   +   
Sbjct: 328 ----ASMHELVQEATGLDFMGFADRAVAASAMARAGLEVPSKADSVGRLLNEAFEQAVE 382



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPP 535
            +++L   G E A+            Q        ++              +A + GMPP
Sbjct: 413 ERFELFIVGRETANAFSELIDPLDQRQRLEAQQARRQAGDLEAHGVDEDFLQALEVGMPP 472

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG+  GIDR+VML   + ++R+V  FP
Sbjct: 473 TGGLGIGIDRLVMLFTDSPSIRDVIAFP 500


>gi|24379232|ref|NP_721187.1| lysyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|39932192|sp|Q8DUW8|SYK_STRMU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|24377146|gb|AAN58493.1|AE014919_1 lysyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 496

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 131/359 (36%), Gaps = 32/359 (8%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             D+     ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTATSGQLKEKYADKTKEELHDINETATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   +  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DTVGDDNYQIFKKADI----GDFLGVEGEIMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +    +  + R++II+ +R  +    F+E  TP+L   +
Sbjct: 150 KFHGLTDVETIYRKRYLDLISNRESLERFITRSKIISEIRRYLDGLGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A          Q     L  A + + + L+  G +R +++   FR+E   +   P E
Sbjct: 210 GGAAAKPFTTHHNAQDMDMVLRIATELHLKRLIVGGMERVYEMGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ + +DI++  E +++           ++     I  ++  +R        
Sbjct: 269 FTSIEVYQAYADFEDIMDLTEGIVQHAATAVKGDGPITYQGTEIKINEPFKRAH------ 322

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARS 350
                + ++ +     +F     +       +   +P +    +          E+   
Sbjct: 323 -----IVDLIKEVTGVDFWKEMTLAEAQALAQEKNVPLEKHYTSVGHIINAFFEEFVEE 376



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  I          +    + K  D       +++L     E  +     +  
Sbjct: 369 FFEEFVEETLIQPIFVYGHPVEVSPLAKKNAD-DPRFTDRFELFIMTKEYGNAFTELNDP 427

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
              L+ F     +KE+ ++   G       A + GMPP GG+  GIDR+VMLL     +R
Sbjct: 428 IDQLERFKAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIR 487

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 488 DVLLFPTMK 496


>gi|308389530|gb|ADO31850.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha710]
          Length = 503

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKIAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNQGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    ++ N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F      K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|304569719|ref|YP_011589.2| lysyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
          Length = 514

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 61/292 (20%), Positives = 116/292 (39%), Gaps = 21/292 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +   R  G + F  I D  G  Q  A  +    E  K+ +   +  I G+     
Sbjct: 79  TMAGRIVSHRSFGKVAFFHIMDRTGRMQCYAAREELGEEAYKTFKKLDIGDIVGV----- 133

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHK 140
                    TG++ LS  ++ +L+ +   PLP          IR++ R++DL        
Sbjct: 134 -SGRLFRTKTGELTLSCTEVRLLTKSIR-PLPEKYHGLKDVEIRYRQRYVDLIVTPRARD 191

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
              KRT I+   R  + A  F+E  TP++ A      A+ F+          Y +  AP+
Sbjct: 192 IFRKRTIIVREFRRFLEARGFMEVETPMMQAIPGGATAKPFVTFHNALDMQLY-MRIAPE 250

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF++ F+I   FR+E   +   P EF   +   ++   +D+++  E +   
Sbjct: 251 LYLKRLLVGGFEKVFEINRNFRNEGISTQHNP-EFTMCEFYWAYATFEDLMDLTEELFSH 309

Query: 260 VFEEFSN----------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +  E              +     ++R+ + +++ + G   P+  N      
Sbjct: 310 IAREVCGSSVITYQGQEVDLTPGKWVRLTFHESLEKVGGHSPEFYNDYEKVR 361



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            ++ + E  ++      +  P       + N+       +++L   G E+A+     +  
Sbjct: 384 LFDLDVEP-RLIQPTFIYHYPTDISPLSRRNEQNPDVTDRFELFITGRELANAFSELNDP 442

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F +    KE  ++          RA + GMPP  G   GIDR+VMLL  + ++R
Sbjct: 443 VDQRMRFEDQVKEKEAGDDEAHFMDEDYLRALEYGMPPAAGQGVGIDRLVMLLTDSPSIR 502

Query: 558 EVSLFP 563
           EV LFP
Sbjct: 503 EVILFP 508


>gi|320459194|dbj|BAJ69815.1| lysyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 559

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 103/563 (18%), Positives = 188/563 (33%), Gaps = 125/563 (22%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANPDSACFEIAKSVR 66
            G+     VG    ++G V  +R  GG+ F+ +   D   I  +++  +      A S++
Sbjct: 108 AGEETEDMVG----IAGRVLFLRNAGGLCFVQLSAGDGTKIQGMISKKEIG----ADSLK 159

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G  +      I +   TG++ + A +  I S A +    +   ++  E  R 
Sbjct: 160 QFKQLVDLGDHLYLKGRVIASK--TGELSVFATEWAIASKALQPLPAL--HKDLNEDTRT 215

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           +  ++ +  D   +N+V+ R++ + S+R      +F+E  TP+L        AR F    
Sbjct: 216 RKPYIGMIADENIRNMVRNRSKAVASLRRTFDDHDFLEVETPMLQTLHGGAAARPFTTHM 275

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ + +  +  G DR F+I   FR+E   +   P EF  ++   ++ 
Sbjct: 276 NAFDLDLY-LRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYG 333

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             D I   ++ +++    +    +                            + + + TE
Sbjct: 334 TYDSIGQLVKELVQKTAMDVFGSH---------------------------KVTLLDGTE 366

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +    E++  S   S++       +P  G        + + E A   G            
Sbjct: 367 YDFGGEWKTISMYDSLSEALGEQIVPNGGPDNPGTSVEHLGEIADKLG-----------V 415

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E  +V   G + +HL                                             
Sbjct: 416 ERDDVENHGKLVEHLWEH------------------------------------------ 433

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                  +E  ++ DFP      E   +   H                        ++DL
Sbjct: 434 -FYEDKLYEPTFVRDFPV-----ETSPLVKGHR----------------TKPGVVEKWDL 471

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIA 540
              GFE+A+G    +   V  + F          +            A   GMPP GG+ 
Sbjct: 472 YVRGFELATGYSELNDPVVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMG 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            GIDR+++ L GA  +RE   FP
Sbjct: 532 MGIDRLLIALTGA-TIRETITFP 553


>gi|121635115|ref|YP_975360.1| lysyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|166229812|sp|A1KUN1|SYK_NEIMF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|120866821|emb|CAM10579.1| lysyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|325132393|gb|EGC55086.1| lysyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325138382|gb|EGC60950.1| lysyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 503

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    ++ N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIIDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F      K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|52842004|ref|YP_095803.1| lysine tRNA synthetase, heat inducible [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|148359321|ref|YP_001250528.1| lysine tRNA synthetase [Legionella pneumophila str. Corby]
 gi|296107368|ref|YP_003619068.1| lysyl-tRNA synthetase, class II [Legionella pneumophila 2300/99
           Alcoy]
 gi|81377301|sp|Q5ZUL6|SYK_LEGPH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229810|sp|A5ICT2|SYK_LEGPC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|52629115|gb|AAU27856.1| lysine tRNA synthetase, heat inducible [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|148281094|gb|ABQ55182.1| lysine tRNA synthetase, heat inducible [Legionella pneumophila str.
           Corby]
 gi|295649269|gb|ADG25116.1| lysyl-tRNA synthetase, class II [Legionella pneumophila 2300/99
           Alcoy]
 gi|307610477|emb|CBX00049.1| hypothetical protein LPW_18041 [Legionella pneumophila 130b]
          Length = 496

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 62/281 (22%), Positives = 123/281 (43%), Gaps = 21/281 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F  I+D  G  QV    +    +I +  +   +    G ++ 
Sbjct: 62  KVSVAGRIVLRRIMGKASFFHIQDVSGRIQVYLRSNDLP-DIYEQFKHWDL----GDIVG 116

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
              E    N  TG++ ++A+ +E+L+ +   PLP        + ++++ R++DL  +   
Sbjct: 117 VQGELFKTN--TGELTINAEHVELLTKSLR-PLPDKFHGLADQELKYRKRYVDLIANEDS 173

Query: 140 KNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQA 197
           +     R+ +I + R  M   +F+E  TP++        AR F+        + Y L  A
Sbjct: 174 RKTFLIRSHLIKAFREFMDDNHFLEVETPMMHPIPGGALARPFVTHHNTLDMTMY-LRIA 232

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R ++I   FR+E   +   P EF  L+   ++ + +D++N  E + 
Sbjct: 233 PELYLKRLVVGGFERVYEINRNFRNEGISTRHNP-EFTMLEFYQAYADYNDLMNFTEQLF 291

Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTD 289
             + ++      +            F R+   +AI +Y  D
Sbjct: 292 HYLCDKVLATRQIEYQGQVIDFNKPFERLSVKEAILKYHPD 332



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 73/199 (36%), Gaps = 30/199 (15%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           ++    + K+   +  + +      +   +     G P K        +  + +E   + 
Sbjct: 320 LSVKEAILKYHPDIKAQQLETVEGCR---TLLNDLGLPYKETDGLGKLQIILFEE--TVE 374

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              F+  +I ++P  E +   ++                    +D       +++    G
Sbjct: 375 HQLFQPTFITEYPT-EISPLARR--------------------SDTNPEVTDRFEFFIAG 413

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGID 544
            EIA+G    + +E   + F      K+  +            A + G+PP  G   GID
Sbjct: 414 REIANGFSELNDAEDQAERFRKQVEEKDAGDLEAMHFDSDYIEALEYGLPPTAGEGIGID 473

Query: 545 RIVMLLLGAKNVREVSLFP 563
           R+VML   ++++R+V LFP
Sbjct: 474 RLVMLFTNSQSIRDVILFP 492


>gi|304387240|ref|ZP_07369437.1| lysine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304338728|gb|EFM04841.1| lysine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|325128487|gb|EGC51366.1| lysyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 503

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKIAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    ++ N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIIDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F +    K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|53719891|ref|YP_108877.1| lysyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|81379446|sp|Q63SN9|SYK_BURPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|52210305|emb|CAH36284.1| lysyl-tRNA synthetase [Burkholderia pseudomallei K96243]
          Length = 508

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 65/308 (21%), Positives = 117/308 (37%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVS--DVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH    L     D            V ++G +   R  G   F  ++D  G  Q    P 
Sbjct: 43  THHAAGLQTEYADADKEALDAKALDVAVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPA 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +L+ A   PLP  
Sbjct: 103 DVGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVKCTELRLLAKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 +  R++ R++DL            RT+ I S+R  M   +F+E  TP+L     
Sbjct: 156 FHGLADQETRYRQRYVDLIVTPETRATFRARTKAIASIRKFMSDADFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T+            F R+    AI+
Sbjct: 274 FTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATIRYQGRELDLAKPFHRLTITQAIQ 333

Query: 285 RYGTDKPD 292
           +Y  +  D
Sbjct: 334 KYAPNYTD 341



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 61/163 (37%), Gaps = 27/163 (16%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
            P    +     +  + +E        +E  +I+D+P                       
Sbjct: 363 QPAFLNAGIGALQLALFEE--TAEAQLWEPTFIIDYPI---------------------E 399

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                + +D ++    +++L   G EIA+G    +  E     F      K+  +     
Sbjct: 400 VSPLARESDTVAGITERFELFVTGREIANGFSELNDPEDQAARFRKQVEQKDAGDEEAMF 459

Query: 525 ----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 RA + GMPP GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 460 FDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|76811249|ref|YP_334110.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|167895042|ref|ZP_02482444.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167919677|ref|ZP_02506768.1| lysyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|254260252|ref|ZP_04951306.1| lysine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254297039|ref|ZP_04964492.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|123598607|sp|Q3JQP3|SYK_BURP1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|76580702|gb|ABA50177.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|157807694|gb|EDO84864.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|254218941|gb|EET08325.1| lysine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 508

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 65/308 (21%), Positives = 117/308 (37%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVS--DVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH    L     D            V ++G +   R  G   F  ++D  G  Q    P 
Sbjct: 43  THHAAGLQTEYADADKEALDAKALDVAVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPA 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +L+ A   PLP  
Sbjct: 103 DVGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVKCTELRLLAKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 +  R++ R++DL            RT+ I S+R  M   +F+E  TP+L     
Sbjct: 156 FHGLADQETRYRQRYVDLIVTPETRATFRARTKAIASIRKFMSDADFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T+            F R+    AI+
Sbjct: 274 FTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATIRYQGRELDLAKPFRRLTITQAIQ 333

Query: 285 RYGTDKPD 292
           +Y  +  D
Sbjct: 334 KYAPNYTD 341



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +         +    + + +D ++    +++L   G EIA+G    +  
Sbjct: 378 LFEETAEAQLWEPTFIIDYPIEVSPLA-RESDTVAGITERFELFVTGREIANGFSELNDP 436

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      K+  +           RA + GMPP GG   GIDR+VMLL  +  +R
Sbjct: 437 EDQAARFRKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIR 496

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 497 DVLLFP 502


>gi|301632175|ref|XP_002945166.1| PREDICTED: lysyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 476

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 66/304 (21%), Positives = 128/304 (42%), Gaps = 20/304 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F  ++D  G  Q+    D+   E+  + +   +  I G    
Sbjct: 72  QVSVAGRMMLKRVMGKASFTTLQDATGRIQLYVTRDALGEELYAAFKHWDLGDILG---- 127

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
             AE       TG++ +   ++ +L+ +   P+P        + ++++ R++DL  D   
Sbjct: 128 --AEGQLMQTKTGELSVKVTRLRLLTKSLR-PMPDKFHGVADQELKYRQRYVDLMTDEAA 184

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
           +     R++ +NSMR  M+   F+E  TP+L        AR F+      +   Y L  A
Sbjct: 185 RQRFVARSKAVNSMREFMVQHGFLEVETPMLHPIPGGANARPFVTQHNALEQDMY-LRIA 243

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D++   E ++
Sbjct: 244 PELYLKRLLVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYQDLMGFTEQLV 302

Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           R    +      +S           F R+   +AI +Y      + + + + +  +    
Sbjct: 303 RNTALKAVGTLQLSYQGRAVDLSQPFARLTIREAIYQYTEAGAHVDDAVWLVSALKKLGL 362

Query: 309 SEFR 312
           SE +
Sbjct: 363 SEEK 366


>gi|197117228|ref|YP_002137655.1| lysyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197086588|gb|ACH37859.1| lysyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 492

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 20/306 (6%)

Query: 4   YR-THSCGDLGVSDVGSFV--------RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           YR  H+  D+  +     V         ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 30  YRPQHTSADVRAAYGDKEVIEEEPQSFVVAGRILMRRSFGKAAFVQVQDRKGRMQLYMKK 89

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E+     +  +  I G      A        TG++ L+  ++ +L+ +  LPLP 
Sbjct: 90  DTLGEELFAEFENYDIGDIIG------ATGTPFRTKTGELSLAVSELRLLTKSL-LPLPE 142

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R++DL     + +   KR+R+I  +R  M   +F+E  TP++    
Sbjct: 143 KFHGLTDVETRYRQRYVDLIVSPDVREVFYKRSRVIQLIRDFMTKNDFLEVETPMMHPIP 202

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 203 GGATAKPFATHHNALDMELF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNP 260

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  ++   ++   +D++N  E +L  V +E       S     I +    RR+   +  
Sbjct: 261 EFTMMEFYQAYATFEDLMNYTEELLCHVAQELLGTLDFSYGGEPISFQRPWRRFTVKEAI 320

Query: 293 LRNPII 298
           L    I
Sbjct: 321 LEYGDI 326



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 7/130 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           +E   E K I       T     +  L + +D       +++  C G E+A+     +  
Sbjct: 362 FEEVAEIKLIQPTF--ITNYPTEVSPLSRKSDQDPEYVDRFEFFCAGREMANAFSELNDP 419

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F     +K+  +           RA + G+PP  G   GIDR+VMLL  + ++R
Sbjct: 420 RDQKERFLAQVAAKDKGDEEAHYMDEDYIRALEYGLPPTAGEGIGIDRLVMLLTDSPSIR 479

Query: 558 EVSLFPMSQN 567
           +V LFP  + 
Sbjct: 480 DVILFPQLRK 489


>gi|54294664|ref|YP_127079.1| hypothetical protein lpl1741 [Legionella pneumophila str. Lens]
 gi|81368463|sp|Q5WVS0|SYK_LEGPL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|53754496|emb|CAH15980.1| hypothetical protein lpl1741 [Legionella pneumophila str. Lens]
          Length = 496

 Score =  202 bits (514), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 61/281 (21%), Positives = 123/281 (43%), Gaps = 21/281 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F  I+D  G  QV    +    ++ +  +   +    G ++ 
Sbjct: 62  KVSVAGRIVLRRIMGKASFFHIQDVSGRIQVYLRSNDLP-DVYEQFKHWDL----GDIVG 116

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
              E    N  TG++ ++A+ +E+L+ +   PLP        + ++++ R++DL  +   
Sbjct: 117 VQGELFKTN--TGELTINAEHVELLTKSLR-PLPDKFHGLADQELKYRKRYVDLIANEDS 173

Query: 140 KNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQA 197
           +     R+ +I + R  M   +F+E  TP++        AR F+        + Y L  A
Sbjct: 174 RKTFLIRSHLIKAFREFMDDNHFLEVETPMMHPIPGGALARPFVTHHNTLDMTMY-LRIA 232

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R ++I   FR+E   +   P EF  L+   ++ + +D++N  E + 
Sbjct: 233 PELYLKRLVVGGFERVYEINRNFRNEGISTRHNP-EFTMLEFYQAYADYNDLMNFTEQLF 291

Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTD 289
             + ++      +            F R+   +AI +Y  D
Sbjct: 292 HYLCDKVLATRQIEYQGQVIDFNKPFERLSVKEAILKYHPD 332



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +           P       + +D       +++    G EIA+G    + +
Sbjct: 368 LFEETVEHQLFQPT-FITEYPTEISPLARRSDTNPEVTDRFEFFIAGREIANGFSELNDA 426

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   + F      K+  +            A + G+PP  G   GIDR+VML   ++++R
Sbjct: 427 EDQAERFRKQVEEKDAGDLEAMHFDSDYIEALEYGLPPTAGEGIGIDRLVMLFTNSQSIR 486

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 487 DVILFP 492


>gi|313889087|ref|ZP_07822743.1| lysine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312844827|gb|EFR32232.1| lysine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 635

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 75/347 (21%), Positives = 137/347 (39%), Gaps = 31/347 (8%)

Query: 7   HSCG---DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           HS G   +   +D    V ++G +   R HG I FLD+RD  G  QV A  D     +E 
Sbjct: 41  HSVGIKEEFNEADE-REVSIAGRIMSKRRHGKICFLDLRDSEGNIQVFARKDVLEDKYED 99

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K +    ++ + G+V    A         G+I + A  I +LS + ++ LP        
Sbjct: 100 VKGIDIGDIVGVKGIVFKTEA---------GEITVRATDITLLSKSLQI-LPEKFHGLKD 149

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR-CRMIAENFIECSTPIL-TASSPEGARD 179
             +R++ R++DL  +   K++  +   I       +  ++F+E  TPIL T +    AR 
Sbjct: 150 PDLRYRQRYVDLIVNPEVKDVFIKRNKIIKKIREFLDKKDFLEVETPILGTVAGGANARP 209

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F             L  A + + + L+  GFD+ +++   FR+E   +   P EF  +++
Sbjct: 210 FYTHHNTLDIDM-QLRIANELFLKRLIVGGFDKVYEMGKMFRNEGMDTRHNP-EFTNIEL 267

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++V+ ++++   E++   V  E    +T++     IC     +R           I M
Sbjct: 268 YQAYVDYEEMMRITEDLFEYVALEVLGTDTINYQGTEICLKAPWKR-----------ITM 316

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
            +  + +   +F                 I              M E
Sbjct: 317 IDAVKKYADVDFNEIDTDEKAREIAREKGIEVHENDTWGKLLSEMFE 363



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   EE  ++              + K N        +++   N +E A+     +  
Sbjct: 361 MFEEFCEEHLVEPTFVIGHPVDVSPLA-KRNPKDPRLTQRFEAFINTWEFANAFSELNDP 419

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               Q F      K   ++           A + G+PP GG+  G+DR+++LL    ++R
Sbjct: 420 IDQRQRFEAQVAEKAAGDDEAHPMDSDFINAIEVGLPPTGGLGIGVDRMIVLLTDQPSIR 479

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 480 DVLLFPTMK 488


>gi|312869848|ref|ZP_07729989.1| lysine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094627|gb|EFQ52930.1| lysine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 498

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 78/339 (23%), Positives = 126/339 (37%), Gaps = 28/339 (8%)

Query: 4   YRTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
            R H   DL             + G  V ++G + R R  G   F D  D  G  QV A 
Sbjct: 31  KRDHLAQDLHDEYDQYDKDELNEKGEMVTIAGRMTRKRSSGKAGFADFVDRTGKIQVYAR 90

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D    E     +   +    G  +    + I  N  TG++ + A KI  LS A   PLP
Sbjct: 91  KDMVGDEPYHIFKRADI----GDFLGIEGDVIKTN--TGELTVRAHKITFLSKALR-PLP 143

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TA 171
              E        ++ R+LDL  +    K   +RT II ++R  M    F E  TPIL T 
Sbjct: 144 NKWEGVTDPETIYRQRYLDLISNPESFKRFHQRTAIIKAVRKYMDDHGFTEVETPILNTQ 203

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F+          Y L  A + Y + L+  GF+R +++   FR+E        
Sbjct: 204 AGGANARPFVTHHNALDIDMY-LRIATELYLKRLIVGGFERVYELGRIFRNEGMD-PHHN 261

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF  ++   ++ +  D+++  E +++   +  S+         +I Y       G D  
Sbjct: 262 PEFTTMETYAAYFDFQDVMDETEGIVKAAAKVVSDDG-------KITYQGREIDLGGDFK 314

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
            +     +   T      E         +   +++   P
Sbjct: 315 RITMVDAVKEKTGIDFGDESMTDDDAKKLAEDHKIEFKP 353



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 10/154 (6%)

Query: 421 AQELGIINCNCFEFCW----IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           A++L   +   F+  W    I++  F E+ E+   +      +  P       K N    
Sbjct: 340 AKKLAEDHKIEFKPYWTKGHILNAFFEEYVEDT--LIQPTFVYEYPVEVSPLAKRNKENP 397

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCG 532
               +++L  +G E+ +     +      + F      +    +  E       +A + G
Sbjct: 398 AMTDRFELYVDGSELGNAFSELNDPIDQKERFEMQAKERANGNDEAEPVDLDYVQALEYG 457

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP GG+  GIDR+VMLL  AK++R+V LFP  +
Sbjct: 458 MPPTGGLGIGIDRLVMLLTDAKSIRDVILFPTMR 491


>gi|257871360|ref|ZP_05651013.1| lysyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257805524|gb|EEV34346.1| lysyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 497

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 131/354 (37%), Gaps = 28/354 (7%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            +++     ++G +   R  G   F  ++D  G  Q+    
Sbjct: 39  RTHNSAELHELFDQRTKEELTEMNLSASVAGRMVTKRGKGKAGFAHLQDRDGQIQIYVRK 98

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G     S E +     TG++ + A++I ILS A   PLP 
Sbjct: 99  DQVGDEPYEGFKHADL----GDFFGVSGEIM--KTDTGEVTIKAKEIVILSKALR-PLPD 151

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILT-AS 172
                     R++ R+LDL  +       +KR++II+ +R  +    +IE  TP+L   +
Sbjct: 152 KYHGLTNIEQRYRQRYLDLISNKDSFDRFMKRSQIISEIRRYLDGHGYIEVETPVLHNQA 211

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P 
Sbjct: 212 GGAAARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP- 269

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ +  D+++  E ++R   E+  +          I YD       +D   
Sbjct: 270 EFTMLEAYTAYTDFKDVMDLTEGIIRNAAEKVLDSAV-------ITYDGQEVDLASDFAR 322

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           +     +   T      E  +                    G     F +   E
Sbjct: 323 VHMVDAIKQQTGVDFWKEMTIEEAHALAKEHQVEVTPTMTVGHVINEFFETFVE 376



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E+ +      +  P       K N        +++L   G E A+     +      Q F
Sbjct: 376 EETLQQPTFVYGHPVEVSPLAKKNPKDPRFTDRFELFIVGREFANAFTELNDPIDQRQRF 435

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 ++   +           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP 
Sbjct: 436 EAQEKERQEGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPT 495

Query: 565 SQ 566
            +
Sbjct: 496 MR 497


>gi|293376909|ref|ZP_06623126.1| lysine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325838530|ref|ZP_08166552.1| lysine--tRNA ligase [Turicibacter sp. HGF1]
 gi|292644455|gb|EFF62548.1| lysine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325490825|gb|EGC93127.1| lysine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 495

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 72/363 (19%), Positives = 134/363 (36%), Gaps = 24/363 (6%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH    L           + +    V ++G +   R  G   F  I+D  G  Q+    
Sbjct: 34  RTHLSSQLVEEFGEFSKEELEEKNIEVAIAGRIRTKRGKGKAGFAHIQDIKGQVQIYVRQ 93

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E         +  I G+        +      G++ +  ++   L+ A   PLP 
Sbjct: 94  DAVGEEAYAFFDKADLGDIVGV------RGVVFKTKVGELSIKVKEYTPLTKALR-PLPE 146

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTAS- 172
                     R++ R++DL  +   K   + RTRII +MR  +    ++E  TPIL  + 
Sbjct: 147 KYHGLTDVEERYRRRYVDLIMNEESKQTFITRTRIITAMRRYLDNLGYLEVETPILHTTL 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F           Y L  A + + + L+  G ++ ++I   FR+E   S R   
Sbjct: 207 GGAAARPFETHHNALDMPLY-LRIATELHLKRLLVGGLEKVYEIGRIFRNEGI-SVRHNP 264

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ + + +++  EN++  + +E     TV      I  + A+        D
Sbjct: 265 EFTSIELYEAYGDMETMMDLTENMIASIAQEVLGTTTVPYGGHEI--NLAVGWKRWHMVD 322

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-DRMNEWARSQ 351
               I   +  +     E +  +K  +V        +          F  D++ +     
Sbjct: 323 AIKEITGVDFFKEMTFEEAKAIAKEHNVEVPTHFTGVGHIINAFFEEFVEDKIVQPTFIY 382

Query: 352 GQP 354
           G P
Sbjct: 383 GHP 385



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 4/123 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E KI      +  P       K N        +++   +G E  +     +      + F
Sbjct: 372 EDKIVQPTFIYGHPVEVSPLAKKNAKDPRFTDRFEFFIDGREYGNAFTELNDPIDQKERF 431

Query: 509 SNV----GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                   +  +           A + GMPP GG+  GIDR+VMLL  + ++R+V LFP 
Sbjct: 432 EAQLAEKELGNDEASEMDVDYIEALEYGMPPAGGLGIGIDRLVMLLTNSPSIRDVLLFPT 491

Query: 565 SQN 567
            + 
Sbjct: 492 MRK 494


>gi|126657196|ref|ZP_01728362.1| asparaginyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126621467|gb|EAZ92178.1| asparaginyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 463

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 73/366 (19%), Positives = 129/366 (35%), Gaps = 53/366 (14%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           M   R      L        V + GWV   R      F+++ D   +  +    D +   
Sbjct: 1   MQTKRVRDI--LRYGKPDETVTIQGWVRTKRELKEFAFMEVNDGSSLNSLQVVLDESVPN 58

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             ++ K + +   + + G ++    +  N       IEL A K+++   ++    P+  +
Sbjct: 59  YQDVLKLLNTGASVEVSGTLVQSPGKGQN-------IELKAAKVQVYGTSDPETYPLQKK 111

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           R   E +R     L  R +TL   I  R     ++       +F+   TPI+TAS  EGA
Sbjct: 112 RHSFEFLR-TIGHLRSRTNTLGAVIRVRNACATAIHKFFQERDFLWIHTPIITASDCEGA 170

Query: 178 RDFLVPSRVNQG--------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCF 220
            +    +  + G               F+   A      Q +  +MA  F   +   P F
Sbjct: 171 GELFTVTNFDLGKVPLDKQQKIDYTQDFFGKQAYLTVSGQLEAEVMAMAFQNVYTFGPTF 230

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------------- 266
           R E+  + R   EF+ ++ EM+F + +   +  E  L+ +F+                  
Sbjct: 231 RAENSNTSRHLAEFWMVEPEMAFCDIEGDQDLAEEFLKYIFKYVLEACPEDMEFFNKRID 290

Query: 267 -------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKI 317
                   N ++N F RI Y  AI             +   +   +EH  +    +F K 
Sbjct: 291 KSVLETADNIINNEFERITYTKAIELLEKSNKKFEYAVEWGIDLQSEHERYLAEELFKKP 350

Query: 318 LSVNPG 323
           L V   
Sbjct: 351 LIVTNY 356



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 4/77 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    +++ +  + +GI  + +           + G  PH G   G +R+V  
Sbjct: 386 EIIGGSQREERLDILEKRINEMGIIPDDLW----WYLDLRRYGTVPHAGFGLGFERVVQF 441

Query: 550 LLGAKNVREVSLFPMSQ 566
           + G  N+R+V  FP + 
Sbjct: 442 MTGMTNIRDVIPFPRTP 458


>gi|254184374|ref|ZP_04890964.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|184214905|gb|EDU11948.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1655]
          Length = 508

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 65/308 (21%), Positives = 117/308 (37%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVS--DVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH    L     D            V ++G +   R  G   F  ++D  G  Q    P 
Sbjct: 43  THHAAGLQTEYADADKEALDAKALDVAVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPA 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +L+ A   PLP  
Sbjct: 103 DVGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVKCTELRLLAKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 +  R++ R++DL            RT+ I S+R  M   +F+E  TP+L     
Sbjct: 156 FHGLADQETRYRQRYVDLIVTPETRATFRARTKAIASIRKFMSDADFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T+            F R+    AI+
Sbjct: 274 FTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATIRYQGRELDLAKPFHRLTITQAIQ 333

Query: 285 RYGTDKPD 292
           +Y  +  D
Sbjct: 334 KYAPNYTD 341



 Score =  102 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 61/163 (37%), Gaps = 27/163 (16%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
            P    +     +  + +E        +E  +I+D+P                       
Sbjct: 363 QPAFLNAGIGALQLALFEETS--EAQLWEPTFIIDYPI---------------------E 399

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                + +D ++    +++L   G EIA+G    +  E     F      K+  +     
Sbjct: 400 VSPLARESDTVAGITERFELFVTGREIANGFSELNDPEDQAARFRKQVEQKDAGDEEAMF 459

Query: 525 ----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 RA + GMPP GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 460 FDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|207340581|gb|EDZ68888.1| YPL104Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 362

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 106/333 (31%), Positives = 167/333 (50%), Gaps = 33/333 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRV--RPHGGIIFLDIRDHYGITQVVANPDSAC 58
           + R  T +   L     G  + L+GW+ +   R    +IF  +RD  G    + +  S  
Sbjct: 30  LFRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKS-- 87

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
             + K    E V+   G++   S +   +N    + E+  + I +L+ + + P  +   +
Sbjct: 88  --LLKGFTLEDVVQAVGIL---SLKRKLSNEDADEYEVQLEDITVLNASNKKPAQMQDFK 142

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                   ++R+L LR       + KR+ I   +R      +F E  TP+L  ++PEGAR
Sbjct: 143 LS-AIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNFDFTEVETPMLFKATPEGAR 201

Query: 179 DFLVPSRVNQGS----FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           +FLVP+R  +      FYAL Q+PQQYKQLLMASG ++Y+Q+A CFRDED R+DR P EF
Sbjct: 202 EFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQP-EF 260

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN-----------------TVSNNFLRI 277
            Q+DMEM+F   +D++  +E  + GV+ +FS                      + +  R+
Sbjct: 261 TQVDMEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLDSKGTLVPDEKGNGTVSIFRM 320

Query: 278 CYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVHS 309
            Y+ A+  YG DKPDLR P + + N+ E    S
Sbjct: 321 TYEQAMTSYGIDKPDLRAPDLKIINLGEFNAFS 353


>gi|126441810|ref|YP_001059617.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|166229800|sp|A3NB96|SYK_BURP6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|126221303|gb|ABN84809.1| lysine--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 508

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 65/308 (21%), Positives = 117/308 (37%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVS--DVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH    L     D            V ++G +   R  G   F  ++D  G  Q    P 
Sbjct: 43  THHAAGLQTEYADADKEALDAKALDVAVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPA 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +L+ A   PLP  
Sbjct: 103 DVGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVKCTELRLLAKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 +  R++ R++DL            RT+ I S+R  M   +F+E  TP+L     
Sbjct: 156 FHGLADQETRYRQRYVDLIVTPETRATFRARTKAIASIRKFMSDADFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T+            F R+    AI+
Sbjct: 274 FTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATIRYQGRELDLAKPFHRLTITQAIQ 333

Query: 285 RYGTDKPD 292
           +Y  +  D
Sbjct: 334 KYAPNYTD 341



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 61/163 (37%), Gaps = 27/163 (16%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
            P    +     +  + +E        +E  +I+D+P                       
Sbjct: 363 QPAFLNAGIGALQLALFEE--TAEAQLWEPTFIVDYPI---------------------E 399

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                + +D ++    +++L   G EIA+G    +  E     F      K+  +     
Sbjct: 400 VSPLARESDTVAGITERFELFVTGREIANGFSELNDPEDQAARFRKQVEQKDAGDEEAMF 459

Query: 525 ----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 RA + GMPP GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 460 FDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|154686483|ref|YP_001421644.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166231657|sp|A7Z5Y7|SYN_BACA2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|154352334|gb|ABS74413.1| AsnS [Bacillus amyloliquefaciens FZB42]
          Length = 430

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 85/321 (26%), Positives = 128/321 (39%), Gaps = 34/321 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVL 71
              G  V +  WV   R  G I FL +RD  G  Q   V A  +   F+IAKSV  E  L
Sbjct: 10  KHTGEEVMIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEEDIFQIAKSVTQETSL 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G+V       +         EL+   IE++  A + P+     +E+       +R L
Sbjct: 70  YVKGIVKEDERSPL-------GYELAVTSIEVIHEATDYPITP---KEHGTEFLMDHRHL 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR    H  +  R  II +       E F++   PILT S+PEG  +       ++ +F
Sbjct: 120 WLRSKRQHAIMKIRNEIIRATYEFFNKEGFVKVDPPILTGSAPEGTTELFATKYFDEDAF 179

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L 
Sbjct: 180 --LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFEENLE 236

Query: 252 TMENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRY---GTDKPDL 293
             EN +  + +       +  N               F RI YD AI      G D  + 
Sbjct: 237 VQENYVAYIVQSVLEHCKIELNTLGRDTSKLEQIKAPFPRITYDKAIEFLKEKGFDDIEW 296

Query: 294 RNPIIMHNVTEHFVHSEFRVF 314
            +     + T      +  VF
Sbjct: 297 GDDFGAPHETAIAESYDKPVF 317



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 50/140 (35%), Gaps = 26/140 (18%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDL 484
           I  +  +  +I  +P             +  PF M         +   DL++ + +    
Sbjct: 308 IAESYDKPVFITHYP------------TSLKPFYMQPAKDRDDVVLCADLIAPEGYG--- 352

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
                EI  G  R H  +++ +     G+      + +       Q G  PH G   G++
Sbjct: 353 -----EIIGGSERVHDMDLLEERLKEHGLD----SDAYKWYAELRQYGSVPHSGFGLGLE 403

Query: 545 RIVMLLLGAKNVREVSLFPM 564
           R V  + GA +VRE   FP 
Sbjct: 404 RTVAWISGAPHVRETIPFPR 423


>gi|117924339|ref|YP_864956.1| lysyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|226737093|sp|A0L6F7|SYK_MAGSM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|117608095|gb|ABK43550.1| lysyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 501

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 67/278 (24%), Positives = 127/278 (45%), Gaps = 20/278 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+++G +  +R  G + F  ++D  G  Q+ A  D    E+  +V  +  +   G ++  
Sbjct: 64  VKVAGRIMLLRNFGKLTFATLQDESGRLQISAQRDVVGAELYSTVFRKIEV---GDILGV 120

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                   +  G++ +  ++ E+LS A   PLP           R++ R++DL  +T  +
Sbjct: 121 EGHLFRTKV--GELTVQVERFELLSKAVR-PLPEKFHGLEDVETRYRQRYVDLIVNTEVR 177

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
            I K R+R+I+ +R  M    F+E  TP++        AR F+          Y L  AP
Sbjct: 178 EIFKTRSRVISRIRQFMEHRGFLEVETPMMHPIPGGATARPFVTHHNALDTDLY-LRIAP 236

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +  ++++  E +++
Sbjct: 237 ELYLKRLIVGGFERVFEINRNFRNEGL-SPRHNPEFTMMEFYQAYTDYRELMDFTEALVQ 295

Query: 259 GVFEEFSNGN----------TVSNNFLRICYDDAIRRY 286
            V ++ + G             S  + R+   +AI RY
Sbjct: 296 DVVKDVNEGELTVAYQGQELDFSGPWARLTPAEAIVRY 333



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 79/227 (34%), Gaps = 22/227 (9%)

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD 415
           AY  +R       A +  V K +N           ++   G        + +     A  
Sbjct: 279 AYTDYRELMDFTEALVQDVVKDVNEGELTVAYQGQELDFSGPWARLTPAEAIVRYMEADA 338

Query: 416 ARNH-------IAQELGIINCNCFE----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
           AR         +A+ LGI     ++       I     +E    E K+         P  
Sbjct: 339 ARITERGYLESLAESLGIKAETSWDDGMLLLTI-----FE-EGVEHKLMAPTFIIDYPIS 392

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                + +D     A +++L   G EIA+     +        F     +K+        
Sbjct: 393 VSPLSRRSDDNPDIAERFELFIAGREIANAFSELNDPADQASRFQKQVEAKDAGNEEAMH 452

Query: 525 ----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                 RA + GMPP GG   GIDR+VMLL  A N+REV LFP  + 
Sbjct: 453 FDADYIRALEYGMPPTGGEGIGIDRLVMLLTDAANIREVLLFPQMKR 499


>gi|319639579|ref|ZP_07994326.1| lysyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317399150|gb|EFV79824.1| lysyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 503

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 70/315 (22%), Positives = 133/315 (42%), Gaps = 23/315 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++   ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEISKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVTGQIQLYLNNKGVSQEVLDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      A+        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AKGTLFKTNHGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPDLRN 295
           + + ++   E+++R      +    +S N         F R+   +AI++Y     D + 
Sbjct: 285 DYERMMQMAEDIIRNASRAVNGTAKISYNGKEVDLESPFERLTILEAIKKYNPHYTDEQL 344

Query: 296 PIIMHNVTEHFVHSE 310
                   E   H E
Sbjct: 345 NDEEWLKKEIVKHGE 359



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIIDYP---------------------VEVSPLARASDSKPGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F      K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|89900573|ref|YP_523044.1| lysyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|89345310|gb|ABD69513.1| lysyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 520

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 64/308 (20%), Positives = 125/308 (40%), Gaps = 30/308 (9%)

Query: 8   SCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
              DL  + VG             +++G +   R  G   F  ++D  G  Q+    +  
Sbjct: 48  HAADLFAAHVGQTPEGLIEQGATAKVAGRMMLKRVMGKASFATLQDSTGRIQLYIKGEDV 107

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+  S +   +  I       +AE       TG++ + A  + +L+ +   P+P    
Sbjct: 108 GAEVYASFKHWDLGDI------VAAEGKIFKTKTGELSIHATSLRLLTKSLR-PMPDKFH 160

Query: 118 REYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
               +  +++ R++DL  D T       R++ ++ +R  M+A +F+E  TP+L       
Sbjct: 161 GMNDQETKYRQRYVDLMMDETARARFTARSKAVSGIREFMVAHDFLEVETPMLHPIPGGA 220

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            A+ F           + L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF 
Sbjct: 221 NAKPFTTHHNALDQQMF-LRIAPELYLKRLIVGGFERVFEINRSFRNEGI-SVRHNPEFT 278

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY 286
            ++   ++ +  D++   E ++R   ++      +S           F R+   +AI ++
Sbjct: 279 MMEFYAAYWDYQDLMTFTEKLIRDAAQKAVGTLELSYGGRAVDLTQPFERLTIHEAICKF 338

Query: 287 GTDKPDLR 294
                +L 
Sbjct: 339 TEAGQELE 346



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 11/129 (8%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           ++E   EEK         +P  +        + +D       +++L   G E  +G    
Sbjct: 390 YFEETVEEKLWQPTFICEHPVEISPLA----RASDHKPGVTERFELYITGREFGNGFSEL 445

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           + +E     F     +K+  ++          RA + GMPP GG   G+DR++MLL  + 
Sbjct: 446 NDAEEQASRFHAQVAAKDDGDDEAMYYDHDFIRALEYGMPPTGGCGVGLDRLMMLLTDSS 505

Query: 555 NVREVSLFP 563
           ++R+V LFP
Sbjct: 506 SIRDVILFP 514


>gi|53723795|ref|YP_103320.1| lysyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67642992|ref|ZP_00441742.1| lysine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|121601586|ref|YP_993519.1| lysyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124385926|ref|YP_001029052.1| lysyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126449902|ref|YP_001081027.1| lysyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126453655|ref|YP_001066898.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|134277392|ref|ZP_01764107.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167000660|ref|ZP_02266471.1| lysine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167846463|ref|ZP_02471971.1| lysyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|217420502|ref|ZP_03452007.1| lysine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|226195488|ref|ZP_03791076.1| lysine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|242314267|ref|ZP_04813283.1| lysine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254178151|ref|ZP_04884806.1| lysyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254191407|ref|ZP_04897911.1| lysyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254195944|ref|ZP_04902370.1| lysyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254200277|ref|ZP_04906643.1| lysyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254209353|ref|ZP_04915699.1| lysyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254357975|ref|ZP_04974248.1| lysyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81604733|sp|Q62IZ9|SYK_BURMA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229796|sp|A3ML91|SYK_BURM7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229797|sp|A2SAT3|SYK_BURM9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229798|sp|A1V5L6|SYK_BURMS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229799|sp|A3NX27|SYK_BURP0 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|52427218|gb|AAU47811.1| lysyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121230396|gb|ABM52914.1| lysyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124293946|gb|ABN03215.1| lysine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126227297|gb|ABN90837.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126242772|gb|ABO05865.1| lysine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|134251042|gb|EBA51121.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|147749873|gb|EDK56947.1| lysyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147750126|gb|EDK57197.1| lysyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148027102|gb|EDK85123.1| lysyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|157939079|gb|EDO94749.1| lysyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|160699190|gb|EDP89160.1| lysyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|169652689|gb|EDS85382.1| lysyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|217395914|gb|EEC35931.1| lysine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|225932448|gb|EEH28447.1| lysine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|238524227|gb|EEP87661.1| lysine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242137506|gb|EES23908.1| lysine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243063467|gb|EES45653.1| lysine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 508

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 65/308 (21%), Positives = 117/308 (37%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVS--DVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH    L     D            V ++G +   R  G   F  ++D  G  Q    P 
Sbjct: 43  THHAAGLQTEYADADKEALDAKALDVAVAGRMMLKRVMGKASFATVQDGSGQIQFFVTPA 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +L+ A   PLP  
Sbjct: 103 DVGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVKCTELRLLAKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 +  R++ R++DL            RT+ I S+R  M   +F+E  TP+L     
Sbjct: 156 FHGLADQETRYRQRYVDLIVTPETRATFRARTKAIASIRKFMSDADFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T+            F R+    AI+
Sbjct: 274 FTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATIRYQGRELDLAKPFHRLTITQAIQ 333

Query: 285 RYGTDKPD 292
           +Y  +  D
Sbjct: 334 KYAPNYTD 341



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 61/163 (37%), Gaps = 27/163 (16%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
            P    +     +  + +E        +E  +I+D+P                       
Sbjct: 363 QPAFLNAGIGALQLALFEE--TAEAQLWEPTFIIDYPI---------------------E 399

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                + +D ++    +++L   G EIA+G    +  E     F      K+  +     
Sbjct: 400 VSPLARESDTVAGITERFELFVTGREIANGFSELNDPEDQAARFRKQVEQKDAGDEEAMF 459

Query: 525 ----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 RA + GMPP GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 460 FDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|15612661|ref|NP_240964.1| lysyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|11387139|sp|Q9KGG4|SYK_BACHD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|10172710|dbj|BAB03817.1| lysyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 501

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 55/270 (20%), Positives = 115/270 (42%), Gaps = 11/270 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L+G V   R  G   F  I+D  G  Q+    D+   +      S  +  I G+    
Sbjct: 61  VVLAGRVMTKRGKGKAGFAHIQDLTGQIQIYVRKDAVGDKSYDLFTSIDIGDIVGV---- 116

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             + +      G++ +  Q  ++L+ +   PLP           R++ R+LDL  +   +
Sbjct: 117 --KGVAFKTKVGELSVKVQDFQLLTKSLR-PLPDKYHGLKDVEQRYRQRYLDLIVNPEVR 173

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  V R++I+ SMR  +    ++E  TP + +      AR F+        + Y +  A 
Sbjct: 174 DTFVLRSKILQSMRRYLDDRGYLEVETPTMHSIPGGASARPFVTHHNALDMTLY-MRIAI 232

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+  G ++ ++I   FR+E   +   P EF  +++  ++ + +DI+   E ++ 
Sbjct: 233 ELHLKRLIVGGMEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYNDIMELTELLIA 291

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
            + ++     T++     +  +   RR   
Sbjct: 292 HIAKDVLGTTTITYGEHEVNLEPKWRRVHM 321



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 6/161 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +       +  +++  F+E   EEK I               + K  D    
Sbjct: 343 RALAKEHNVPVKETMTYGHVVN-EFFEHFVEEKLIQPTFVYGHPVAISPLAKKNPD-DPR 400

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L   G E A+     +        F    + +E  ++           + + GM
Sbjct: 401 FTDRFELFIVGREHANAFSELNDPIDQRHRFEQQLVEREQGDDEAHMMDEDFVESLEYGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
           PP GG+  GIDR+VMLL  + ++R+V LFP  ++       
Sbjct: 461 PPTGGLGIGIDRLVMLLTNSPSIRDVLLFPQMRHKDSPATE 501


>gi|298529246|ref|ZP_07016649.1| lysyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510682|gb|EFI34585.1| lysyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 508

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 11/264 (4%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R++G +  +R  G +IF  I DH    Q+    D       K  +   V  I G+     
Sbjct: 71  RVAGRIMALRSFGKVIFAHILDHSDRIQIFVQRDMLGENEFKVFKKLDVGDIIGVH---- 126

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                    TG++ + A++I++L+ A   PLP           R++ R++DL  +   K 
Sbjct: 127 --GALFRTRTGELTIKAEEIQLLTKAVR-PLPEKYHGLKDVETRYRQRYVDLIVNPSSKQ 183

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           I   R RII  +R  + A +FIE  TP++ A      AR F           Y L  AP+
Sbjct: 184 IFLARNRIIRYIRDFLDARDFIEVETPMMQAIPGGATARPFNTHHNALDMKLY-LRVAPE 242

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF++ ++I   FR+E   +   P EF  L+   ++V+  D+++  E ++ G
Sbjct: 243 LYLKRLLVGGFEKVYEINRNFRNEGISTQHNP-EFTMLEFYRAYVDYWDLMDFTEEMISG 301

Query: 260 VFEEFSNGNTVSNNFLRICYDDAI 283
           +    + G  ++     I +    
Sbjct: 302 LCRHMTGGTQITYQGNTIDFTPPW 325



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E ++   H  +  P       + ND       +++L   G EIA+     +  +     F
Sbjct: 381 EPRLQQPHFIYHYPTEISPLSRRNDKDPAITDRFELFIAGREIANAFSELNDPQDQKGRF 440

Query: 509 SNVGISKE--VVENRF--GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 KE   VE  +      RA + GMPP GG   GIDR+VML   + ++REV LFP
Sbjct: 441 QEQVQDKEAGDVEAHYMDEDYIRALEYGMPPAGGEGIGIDRLVMLFTNSASIREVILFP 499


>gi|258513605|ref|YP_003189827.1| lysyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777310|gb|ACV61204.1| lysyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 499

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 64/304 (21%), Positives = 127/304 (41%), Gaps = 28/304 (9%)

Query: 2   HRY-----RTHSCGDL---GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H Y     R H   ++        G  V ++G +   R HG   F +++D  G  QV   
Sbjct: 36  HPYGDKYDRLHCSAEIINNFEQYEGQEVSVAGRLMAKRGHGKAGFANLQDTAGSIQVYGR 95

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            ++   E  +  +   +  I G+      +        G+I +  Q + +LS +   PLP
Sbjct: 96  LNNLGSEDYELFQKLDIGDIIGV------KGKVFRTQKGEITVEIQVLTLLSKSLR-PLP 148

Query: 114 VFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA- 171
                     +R++ R++DL     +    V R++I+  +R  +  + F+E  TP++ + 
Sbjct: 149 EKWHGLRDVELRYRQRYVDLIVNPEVKNQFVARSQIVRCIRNLLDEKGFLEVETPMMQSI 208

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F+          Y L  AP+ Y + L+  GFD+ ++I   FR+E   +   P
Sbjct: 209 AGGAAARPFITHHNALDMELY-LRIAPELYLKRLLVGGFDKVYEINRNFRNEGISTKHNP 267

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDA 282
            EF  L++  ++ +  D++   E ++       +    +S           + R+   +A
Sbjct: 268 -EFTMLELYQAYADYYDMMEMAEYLVYNTSLRVNGTPVISYQEQEINLVPPWNRMPMLEA 326

Query: 283 IRRY 286
           +++Y
Sbjct: 327 VKKY 330



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 62/154 (40%), Gaps = 27/154 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            +  N + +E+  +     +  +I+D+P               +P    +    SL    
Sbjct: 363 GEVLNKVFEEM--VEPKLIQPTFIIDYP------------VEISPLAKKKDDDASL---- 404

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
                 ++++L   G E+A+     +        F      +   ++          +A 
Sbjct: 405 -----TYRFELFIYGREMANAFSELNDPIDQKARFQKQVEQRRSGDDEAHMMDEDYIQAL 459

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + GMPP GG+  GIDR+VMLL  A ++R++ LFP
Sbjct: 460 EYGMPPAGGLGIGIDRLVMLLTNAASIRDIILFP 493


>gi|319789983|ref|YP_004151616.1| lysyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114485|gb|ADU96975.1| lysyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 517

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 58/257 (22%), Positives = 107/257 (41%), Gaps = 9/257 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G         L+G +  +R  G   F  I+D  G  Q     D+   E    V     L 
Sbjct: 58  GEELPSQEFSLAGRIVSMRVMGKAAFFHIQDESGRLQCYIRRDTVGEEFYNKVFKR--LI 115

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G ++            TG++ L  +++  L+ +   PLP           R++ R+LD
Sbjct: 116 DIGDIVGVKGTLFRTR--TGELTLEVKELTPLTKSLR-PLPEKWHGLKDTEKRYRQRYLD 172

Query: 133 LRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   + + + RT +I ++R  + +  F+E  TPIL   +S   A+ F+         
Sbjct: 173 LIVNPEVREVFRTRTEVIKAIREFLDSRGFLEVETPILQPIASGAAAKPFITHYNALDID 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R +++   FR+E   +   P EF  ++  M++ +  D++
Sbjct: 233 VY-LRIAPELYLKRLLVGGFERVYELGKNFRNEGISTRHNP-EFTMVEWYMAYADYYDLM 290

Query: 251 NTMENVLRGVFEEFSNG 267
              E +   + +     
Sbjct: 291 EMTEELFEFLLDRLYGP 307



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 69/211 (32%), Gaps = 36/211 (17%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL--- 424
            +   G            +    L  + G +   +  +  K    A +     A++L   
Sbjct: 311 EIEYQGTKISFKRPFRRISYLEELSKKTGLTPDELLHNEEKVLQKAKELEIENAEKLSHF 370

Query: 425 --------GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
                    ++     +  +++DFP             A +P    + G   L       
Sbjct: 371 KRVQELFEKLVEPELIQPTFVVDFP------------KAISPLAKEKRGNPEL------- 411

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCG 532
               +++L   G E+A+     +  E   + F      K    E           A + G
Sbjct: 412 --VERFELFIYGREVANAYSELNNPEEQARRFKQQLQEKARGDEEAMEYDADFVTALEYG 469

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP  G   GIDR+VML     ++REV LFP
Sbjct: 470 MPPTAGEGIGIDRLVMLFTDKDSIREVLLFP 500


>gi|332523099|ref|ZP_08399351.1| lysine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314363|gb|EGJ27348.1| lysine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 496

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 66/354 (18%), Positives = 133/354 (37%), Gaps = 27/354 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             D+     ++G +   R  G + F  I+D  G  Q+    
Sbjct: 37  RTANSGQLKAKYAEKTKEDLHDLNETAIIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E     +   +    G  +    E +  ++  G++ + A  +  LS +   PLP 
Sbjct: 97  DAVGEENYDIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHLTHLSKSLR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R LDL  +       V R++II+ +R  + +++F+E  TP+L   +
Sbjct: 150 KFHGLTDIETIYRKRHLDLISNRESFNRFVTRSKIISEIRRYLDSKDFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI+N  E +++   +  +    +      I  ++  +R        
Sbjct: 269 FTSIEVYEAYADFQDIMNLTEGIIQHAAKAVTGDGPIDYQGQMIHINEPFKRLHMVDA-- 326

Query: 294 RNPIIMHNVTEHFVHSEFRV-FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                + +VT      E     ++ L+      +       G    AF +   E
Sbjct: 327 -----IKDVTGIDFWKEMSFDDARALAQEKHVPLETHFTTVGHIINAFFEEFVE 375



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      +  P       K N   +    +++L     E A+   
Sbjct: 365 IINAFFEEFVEET--LIQPTFVYGHPVEVSPLAKKNAEDARFTDRFELFIVTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ +    G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 423 ELNDPIDQLSRFEAQAQAKELGDIEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTN 482

Query: 553 AKNVREVSLFPMSQ 566
             ++R+V LFP  +
Sbjct: 483 TTSIRDVLLFPTMK 496


>gi|54297690|ref|YP_124059.1| hypothetical protein lpp1741 [Legionella pneumophila str. Paris]
 gi|81370415|sp|Q5X4D5|SYK_LEGPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|53751475|emb|CAH12893.1| hypothetical protein lpp1741 [Legionella pneumophila str. Paris]
          Length = 496

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 61/281 (21%), Positives = 123/281 (43%), Gaps = 21/281 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F  I+D  G  QV    +    ++ +  +   +    G ++ 
Sbjct: 62  KVSVAGRIVLRRIMGKASFFHIQDVSGRIQVYLRSNDLP-DVYEQFKHWDL----GDIVG 116

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
              E    N  TG++ ++A+ +E+L+ +   PLP        + ++++ R++DL  +   
Sbjct: 117 VQGELFKTN--TGELTINAEYVELLTKSLR-PLPDKFHGLADQELKYRKRYVDLIANEDS 173

Query: 140 KNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQA 197
           +     R+ +I + R  M   +F+E  TP++        AR F+        + Y L  A
Sbjct: 174 RKTFLIRSHLIKAFREFMDDNHFLEVETPMMHPIPGGALARPFVTHHNTLDMTMY-LRIA 232

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R ++I   FR+E   +   P EF  L+   ++ + +D++N  E + 
Sbjct: 233 PELYLKRLVVGGFERVYEINRNFRNEGISTRHNP-EFTMLEFYQAYADYNDLMNFTEQLF 291

Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTD 289
             + ++      +            F R+   +AI +Y  D
Sbjct: 292 HYLCDKVLATRQIEYQGQVIDFNKPFERLSVKEAILKYHPD 332



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 73/199 (36%), Gaps = 30/199 (15%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           ++    + K+   +  + +      +   +     G P K        +  + +E   + 
Sbjct: 320 LSVKEAILKYHPDIKAQQLETLEGCR---TLLNDLGLPYKETDGLGKLQIILFEE--TVE 374

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              F+  +I ++P  E +   ++                    +D       +++    G
Sbjct: 375 HQLFQPTFITEYPT-EISPLARR--------------------SDTNPEVTDRFEFFIAG 413

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGID 544
            EIA+G    + +E   + F      K+  +            A + G+PP  G   GID
Sbjct: 414 REIANGFSELNDAEDQAERFRKQVEEKDAGDLEAMHFDSDYIEALEYGLPPTAGEGIGID 473

Query: 545 RIVMLLLGAKNVREVSLFP 563
           R+VML   ++++R+V LFP
Sbjct: 474 RLVMLFTNSQSIRDVILFP 492


>gi|27468060|ref|NP_764697.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57866954|ref|YP_188601.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251810882|ref|ZP_04825355.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876112|ref|ZP_06284979.1| asparagine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|293366577|ref|ZP_06613254.1| asparagine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258361|sp|Q8CSI9|SYN_STAES RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|81674545|sp|Q5HP89|SYN_STAEQ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|27315605|gb|AAO04739.1|AE016747_236 asparaginyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57637612|gb|AAW54400.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251805562|gb|EES58219.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295137|gb|EFA87664.1| asparagine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|291319346|gb|EFE59715.1| asparagine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329725417|gb|EGG61900.1| asparagine--tRNA ligase [Staphylococcus epidermidis VCU144]
 gi|329735367|gb|EGG71659.1| asparagine--tRNA ligase [Staphylococcus epidermidis VCU045]
 gi|329737271|gb|EGG73525.1| asparagine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 430

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 79/322 (24%), Positives = 122/322 (37%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 9   KKHLNQEVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEETFQLAKDITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L I G +   +   +         E+  + IEI+  A + P+     + +       +R 
Sbjct: 69  LYITGTITEDNRSDL-------GYEMQVKSIEIVHEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II +         F +   PILTAS+PEG  +       ++ +
Sbjct: 119 LWLRSKKQHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDEDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 179 F--LSQSGQLYMEAA-AMAHGRVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHAESL 235

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  + +   N   +                  F RI YDDAI      G D  +
Sbjct: 236 EIQEQYVSHIVQSVLNHCQLELKALDRDTTKLEKVATPFPRISYDDAIEFLKKEGFDDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 296 WGEDFGAPHETAIANHYDLPVF 317



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 64/193 (33%), Gaps = 31/193 (16%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE----- 433
           L +   +    +L+            D ++F            ++ G  +          
Sbjct: 255 LELKALDRDTTKLEKVATPFPRISYDDAIEFLKKEGFDDIEWGEDFGAPHETAIANHYDL 314

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM--ESLKGNDLLSIKAFQYDLVCNGFEI 491
             +I ++P                PF M       +++   DL++ + +         EI
Sbjct: 315 PVFITNYP------------TKIKPFYMQPNPDNEDTVLCADLIAPEGYG--------EI 354

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R +  E++ Q  +   +     E  +       + G  PH G   G++R V  + 
Sbjct: 355 IGGSERINDLELLEQRINEHELD----EESYSYYLDLRRYGSVPHSGFGLGLERTVAWIS 410

Query: 552 GAKNVREVSLFPM 564
           G ++VRE S FP 
Sbjct: 411 GVEHVRETSPFPR 423


>gi|317128623|ref|YP_004094905.1| asparaginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315473571|gb|ADU30174.1| asparaginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 429

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 71/299 (23%), Positives = 120/299 (40%), Gaps = 31/299 (10%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLC 72
            V   V +  W+   R  G I FL +RD  G  Q   V A  + + F++AK +  E  + 
Sbjct: 11  HVEQSVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEESVFQLAKELTQESSIY 70

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G+V                 EL+ Q+I+++  A++ P+     +E+       +R L 
Sbjct: 71  VTGIVREDKR-------APSGYELTVQEIQVIHEAKDYPITP---KEHGTEFLMDHRHLW 120

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR    H  +  R  II +       + F +   PILT SS EG  +       ++ ++ 
Sbjct: 121 LRSKRQHAIMRVRNEIIRATYEFFNEQGFSKVDPPILTGSSAEGTTNLFHTKYFDEDAY- 179

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F++ +D L  
Sbjct: 180 -LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMDHEDSLVV 237

Query: 253 MENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRYGTDKPDLRNP 296
            E  +  V +                          F RI YD+AI     +  ++   
Sbjct: 238 QEQYVSHVVQAVLANCKQELQALERDTSKLENIVAPFPRITYDEAIDMLKKEGHEIEWG 296



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 47/143 (32%), Gaps = 7/143 (4%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY-D 483
            ++     E  W  DF         +K D        P          D    +     D
Sbjct: 284 DMLKKEGHEIEWGEDFGAPHETAIAEKYDKPVFITHYPAEIKAFYMKPDPNREEVVLCAD 343

Query: 484 LVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           L+      EI  G  R    +++ Q +    +S    E  +       + G  PH G   
Sbjct: 344 LIAPEGYGEIIGGSQRIDDEDLLKQRYDEHNLS----EESYQWYLDLRKYGSVPHSGFGL 399

Query: 542 GIDRIVMLLLGAKNVREVSLFPM 564
           G++R V  + G ++VRE   FP 
Sbjct: 400 GLERTVAWMCGVEHVRETIPFPR 422


>gi|237813010|ref|YP_002897461.1| lysine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|237504206|gb|ACQ96524.1| lysine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 508

 Score =  202 bits (513), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 65/308 (21%), Positives = 117/308 (37%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVS--DVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH    L     D            V ++G +   R  G   F  ++D  G  Q    P 
Sbjct: 43  THHAAGLQTEYADADKEALDAKALDVAIAGRMMLKRVMGKASFATVQDGSGQIQFFVTPA 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +L+ A   PLP  
Sbjct: 103 DVGAETYDAFKKWDLGDI------VAARGVLFRTNKGELSVKCTELRLLAKALR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 +  R++ R++DL            RT+ I S+R  M   +F+E  TP+L     
Sbjct: 156 FHGLADQETRYRQRYVDLIVTPETRATFRARTKAIASIRKFMSDADFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T+            F R+    AI+
Sbjct: 274 FTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATIRYQGRELDLAKPFHRLTITQAIQ 333

Query: 285 RYGTDKPD 292
           +Y  +  D
Sbjct: 334 KYAPNYTD 341



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 61/163 (37%), Gaps = 27/163 (16%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
            P    +     +  + +E        +E  +I+D+P                       
Sbjct: 363 QPAFLNAGIGALQLALFEE--TAEAQLWEPTFIIDYPI---------------------E 399

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                + +D ++    +++L   G EIA+G    +  E     F      K+  +     
Sbjct: 400 VSPLARESDTVAGITERFELFVTGREIANGFSELNDPEDQAARFRKQVEQKDAGDEEAMF 459

Query: 525 ----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 RA + GMPP GG   GIDR+VMLL  +  +R+V LFP
Sbjct: 460 FDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVLLFP 502


>gi|213693014|ref|YP_002323600.1| lysyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213524475|gb|ACJ53222.1| lysyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 509

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 103/563 (18%), Positives = 188/563 (33%), Gaps = 125/563 (22%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANPDSACFEIAKSVR 66
            G+     VG    ++G V  +R  GG+ F+ +   D   I  +++  +      A S++
Sbjct: 58  AGEETEDMVG----IAGRVLFLRNAGGLCFVQLSAGDGTKIQGMISKKEIG----ADSLK 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G  +      I +   TG++ + A +  I S A +    +   ++  E  R 
Sbjct: 110 QFKQLVDLGDHLYLKGRVIASK--TGELSVFATEWAIASKALQPLPAL--HKDLNEDTRT 165

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           +  ++ +  D   +N+V+ R++ + S+R      +F+E  TP+L        AR F    
Sbjct: 166 RKPYIGMIADENIRNMVRNRSKAVASLRRTFDDHDFLEVETPMLQTLHGGAAARPFTTHM 225

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ + +  +  G DR F+I   FR+E   +   P EF  ++   ++ 
Sbjct: 226 NAFDLDLY-LRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYG 283

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             D I   ++ +++    +    +                            + + + TE
Sbjct: 284 TYDSIGQLVKELVQKTAMDVFGSH---------------------------KVTLLDGTE 316

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +    E++  S   S++       +P  G        + + E A   G            
Sbjct: 317 YDFGGEWKTISMYDSLSEALGEQIVPNGGPDNPGTSVEHLGEIADKLG-----------V 365

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E  +V   G + +HL                                             
Sbjct: 366 ERDDVENHGKLVEHLWEH------------------------------------------ 383

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                  +E  ++ DFP      E   +   H                        ++DL
Sbjct: 384 -FYEDKLYEPTFVRDFPV-----ETSPLVKGHR----------------TKPGVVEKWDL 421

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIA 540
              GFE+A+G    +   V  + F          +            A   GMPP GG+ 
Sbjct: 422 YVRGFELATGYSELNDPVVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMG 481

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            GIDR+++ L GA  +RE   FP
Sbjct: 482 MGIDRLLIALTGA-TIRETITFP 503


>gi|15672355|ref|NP_266529.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|38258400|sp|Q9CII7|SYK_LACLA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|12723244|gb|AAK04471.1|AE006274_5 lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|326405950|gb|ADZ63021.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 494

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 71/350 (20%), Positives = 140/350 (40%), Gaps = 31/350 (8%)

Query: 2   HRY-RTHSCGDLGVSDVGSFV----------RLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           H++ RTH+  +L  +                 ++G +   R  G + F  ++D  G  Q+
Sbjct: 31  HKFTRTHNSQELHEAYDEKTKEELHELALSGIVAGRLMTKRGKGKVGFAHLQDREGQIQL 90

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    E  +  +   +    G  +    E +  ++  G++ + A+K+  LS A   
Sbjct: 91  YVRKDEVGEENYEIFKKADL----GDFLGVEGEIMKTDM--GELSIKAKKLTFLSKALR- 143

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           R++ R+LDL  +       V R++II+ +R  M    ++E  TP+L
Sbjct: 144 PLPEKFHGLTDTETRYRKRYLDLISNKESFNRFVTRSKIISEIRRYMDGRGYLEVETPVL 203

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
              +   A         +     AL  A + + + L+  G ++ +++   FR+E      
Sbjct: 204 NNEAGGAAARPFYTHHNSLDIDMALRIATELHLKRLIVGGMEKVYELGRVFRNEGMDMTH 263

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYD 280
            P EF  ++   ++ + +DI++  E + + V +     + +  +         F R+   
Sbjct: 264 NP-EFTTMESYEAYADFEDIMDLTEGIFQHVAKTVVGQDVLEYDGKEINVGGKFKRVHMV 322

Query: 281 DAIRR-YGTD-KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           DAI+   G D  P++          EH +H E    S    +N  +E + 
Sbjct: 323 DAIKEVAGVDFWPEMTFEEATALAKEHDIHVEKHFTSVGHIINEFFEKYV 372



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  I      F  P+      K N+       +++L  NG E A+     +  
Sbjct: 367 FFEKYVEETLIQPTFV-FGHPKEISPLAKMNEKDPRFTDRFELFINGKEYANAFSELNDP 425

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
              L+ F     +KE+ ++   G       A + GMPP GG+  GIDR+VML  G  ++R
Sbjct: 426 IDQLERFEAQAKAKELGDDEATGVDYDYVEALEHGMPPTGGLGIGIDRLVMLFTGTTSIR 485

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 486 DVLLFPTMK 494


>gi|257066135|ref|YP_003152391.1| lysyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798015|gb|ACV28670.1| lysyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 631

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 66/303 (21%), Positives = 126/303 (41%), Gaps = 20/303 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
               G  VR++G +   R HG + F+DI+D  G  Q+  N  +   +  K V+   +  I
Sbjct: 48  EKYDGEKVRIAGRIMAKRGHGNMSFMDIQDEEGQIQI-VNRKNVIGDEFKQVKKYDIGDI 106

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      E        G+I +   +  +L       LP          +R++ R+LDL
Sbjct: 107 VGI------EGKVFKTNQGEISIE-TETPLLMTKSLQMLPEKWHGLKDPDLRYRQRYLDL 159

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   K++   R++II+ +R  +  + F+E  TPIL   +             +     
Sbjct: 160 IVNPEVKSVFVQRSQIISEIRRFLDGQGFLEVETPILNTIAGGATARPFTTHHNSLNIGM 219

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GFDR ++I   FR+E   +   P EF  +++  ++ + +D++  
Sbjct: 220 YLRIASELYLKRLIVGGFDRVYEIGRMFRNEGMDATHNP-EFTTMELYQAYGDFEDMMEI 278

Query: 253 MENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY-GTDKPDLRNPIIMHNV 302
            EN++  V  +      V            + RI   DA++ + G D  +++       +
Sbjct: 279 TENMVEHVANKVKGTTVVEFDGNEIELKAPWKRISMIDAVKEHSGVDFNEIKTDEEAIAI 338

Query: 303 TEH 305
            + 
Sbjct: 339 AKE 341


>gi|118602601|ref|YP_903816.1| lysyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|259511534|sp|A1AWN8|SYK_RUTMC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|118567540|gb|ABL02345.1| lysyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 497

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 131/329 (39%), Gaps = 26/329 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           + ++ + S   L   +V   V ++G +   R  G   F+ ++D  G  Q+    D     
Sbjct: 41  IQKFDSSSKEALAQKNV--QVSIAGRMMLKRVMGKASFVHVQDSSGQIQLFITRDELPEN 98

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                  ++     G ++  +      ++  G++ +    I++L+ +   PLP       
Sbjct: 99  FYNE---QFKKLDIGDIVGATGVLFKTSV--GELSIRISDIKLLTKSLR-PLPEKFHGLS 152

Query: 121 PESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEG-AR 178
            +  R++ R++DL  +   +N   +R++I++ +R      +FIE  TP+L        A+
Sbjct: 153 DQETRYRQRYVDLIMNKTSRNTFKRRSQIVSYIRNFFNNHDFIEVETPMLQTIPGGAIAK 212

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F           Y L  AP+ Y + L+  G DR F+++  FR+E   +   P EF  ++
Sbjct: 213 SFETHHNALDMPMY-LRIAPELYLKRLIVGGMDRVFEVSRNFRNEGLSTRHNP-EFTMIE 270

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              ++    D++N  E + RG+  +                  A   Y  +  D   P  
Sbjct: 271 FYQAYATYHDLMNLTEKLFRGIAFDVYG--------------SANIHYQGNDFDFSKPFE 316

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
             +V +  +     + +  L+ +   ++ 
Sbjct: 317 CISVFDSILQYNPNLTATNLNQDNAKKIA 345



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 62/330 (18%), Positives = 108/330 (32%), Gaps = 29/330 (8%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F    D +     +L+ +      G  ++ +F        +  Y    P+L    ++   
Sbjct: 188 FFNNHDFIEVETPMLQTI-----PGGAIAKSFETHHNALDMPMYLRIAPELYLKRLIVGG 242

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +          ++ LS     E   I              + E    +   G+A+  + 
Sbjct: 243 MDRVFEVSRNFRNEGLSTRHNPEFTMIEFYQAYATYHDLMNLTE----KLFRGIAFDVYG 298

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                        +K             L      +   +  D  K           IA+
Sbjct: 299 SANIHYQGNDFDFSKPF--ECISVFDSILQYNPNLTATNLNQDNAK----------KIAE 346

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQ 481
           +LGI     +    I     +E   EEK I       T     +  L + ND       +
Sbjct: 347 KLGIQVKENWGLGKI-QIEIFEATVEEKLIQPTF--ITEYPTEVSPLARCNDDNPFITDR 403

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHG 537
           ++L   G EIA+G    + +E   + F      K+  ++          RA + GMPP  
Sbjct: 404 FELFIGGREIANGFSELNDAENQAERFKKQVEEKDASDDEAMQYDADYIRALEYGMPPTA 463

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G   GIDR+VML   + ++R+V LFP  ++
Sbjct: 464 GEGIGIDRLVMLFTNSPSIRDVLLFPHMRS 493


>gi|312866389|ref|ZP_07726607.1| lysine--tRNA ligase [Streptococcus downei F0415]
 gi|311098083|gb|EFQ56309.1| lysine--tRNA ligase [Streptococcus downei F0415]
          Length = 496

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 131/351 (37%), Gaps = 24/351 (6%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   +  +L   ++     ++G +   R  G + F  ++D  G  Q+    D    E  
Sbjct: 47  KYDDKTKEELH--ELDEKATIAGRLMTKRGKGKVGFAHLQDREGQIQIYVRKDEVGEENY 104

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  +   +    G  +    + +  ++  G++ + A  +  LS A   PLP         
Sbjct: 105 QIFKKADI----GDFLGVEGQVMRTDM--GELSIKATHLTHLSKALR-PLPEKFHGLTDV 157

Query: 123 SIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             +++ R+LDL  +       V R++II+ +R  +    F+E  TP+L   +   A    
Sbjct: 158 ETKYRKRYLDLITNRDSFDRFVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAAKPF 217

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           V     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 218 VTHHNAQDMDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQ 276

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ + +DI++  E +++   +       V      I  ++  +R           + M +
Sbjct: 277 AYADFNDIMDLTEGIIQHATKAVKGDGPVIYQETEIKINEPFKR-----------VHMVD 325

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARS 350
             +     +F     +       +   +P +    +          E+   
Sbjct: 326 AIKEVTGVDFWPQMSLDEAKALAQEKNVPLEKHFTSVGHVINAFFEEFVEE 376



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  I          +    + K  D       +++L     E  +     +  
Sbjct: 369 FFEEFVEETLIQPTFVYGHPVEVSPLAKKNAD-DPRFTDRFELFIMNHEYGNAFTELNDP 427

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
              L+ F     +KE+ ++   G       A + GMPP GG+  GIDR+VMLL     +R
Sbjct: 428 IDQLERFKAQAAAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLVMLLTDTTTIR 487

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 488 DVLLFPTMK 496


>gi|254416475|ref|ZP_05030227.1| lysyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196176679|gb|EDX71691.1| lysyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 516

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 139/364 (38%), Gaps = 35/364 (9%)

Query: 2   HRYRTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H   TH   +L           +V   V ++G +   R  G + F +++D  G  Q+  +
Sbjct: 39  HWQSTHQAAELQEKFADLGNGEEVDFEVAIAGRILARRVFGKLAFFNLQDETGTIQLYLD 98

Query: 54  PDS---ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
                    ++         L   G ++         +   G++ +   +  IL+ +  L
Sbjct: 99  KKRITATMTDLPNPFTPLKQLTDIGDILGVKGTIKRTD--KGELSVYVSEYAILTKSL-L 155

Query: 111 PLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           R++ R++DL    T+ +   +R +I  ++R  +    FIE  TP+ 
Sbjct: 156 PLPDKWHGLTDTEKRYRQRYVDLMVNPTVRETFRRRAKITAAIRRYLEDRGFIEIETPVF 215

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           +  +    AR F+      +   Y L  A + + + L+  GF++ F++   FR+E   + 
Sbjct: 216 STEAGGAEARPFITYHNTLEMELY-LRIATELHLKRLIVGGFEKVFELGRIFRNEGISTR 274

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  +++  ++ + +D++   EN++  V +E      ++     I +    RR   
Sbjct: 275 HNP-EFTSIEVYQAYADYNDMMTLTENLITTVTQESLTTLEITYQGETIDFTPPWRR--- 330

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI------PAKGGGGNRAFCD 342
                   + MH + +     +F  F          +   I      P+ G   N  F  
Sbjct: 331 --------VTMHELVQEVTGLDFNQFKTFDEAKIAAKKVGIEGVEDCPSLGKLLNECFEQ 382

Query: 343 RMNE 346
           +  E
Sbjct: 383 KCEE 386



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 56/171 (32%), Gaps = 27/171 (15%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
           C       N   ++         +  +I+DFP      E   +   H             
Sbjct: 369 CPSLGKLLNECFEQ--KCEETLIQPTFIVDFPI-----EISPLAKPHR------------ 409

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
                      +++L   G E A+            +        K       +      
Sbjct: 410 ----SKPGLVERFELFMAGRETANSFSELTDPIDQRERLEAQAARKAAGDLEAQGVDEDF 465

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
             A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+ ++       +P
Sbjct: 466 LAALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIAFPLLKSSSRDGSPAP 516


>gi|223043225|ref|ZP_03613272.1| asparaginyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222443436|gb|EEE49534.1| asparaginyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 430

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 78/322 (24%), Positives = 121/322 (37%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 9   KQHLNQEVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEETFQLAKEITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++  A + P+     + +       +R 
Sbjct: 69  LYVTGTITEDNRSDL-------GYEMQVKSIEVIHEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II +         F +   PILTAS+PEG  +       +Q +
Sbjct: 119 LWLRSKKQHAVMKIRNEIIRATYEFFNDNGFTKIDPPILTASAPEGTSELFHTKYFDQDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 179 F--LSQSGQLYMEAA-AMAHGRVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHAESL 235

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDAI      G D  +
Sbjct: 236 EVQEQYVTHVVQSVLKNCELELKALDRDTTKLEKVATPFPRISYDDAIEFLKEQGFDDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 296 WGEDFGAPHETAIANHYDLPVF 317



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 66/200 (33%), Gaps = 33/200 (16%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCF--FIAGDPLKFCSFAADARNHIAQELGIINCNC 431
            V K+  +      R    ++   + F      D ++F            ++ G  +   
Sbjct: 248 SVLKNCELELKALDRDTTKLEKVATPFPRISYDDAIEFLKEQGFDDIEWGEDFGAPHETA 307

Query: 432 FE-----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM--ESLKGNDLLSIKAFQYDL 484
                    +I ++P                PF M       +++   DL++ + +    
Sbjct: 308 IANHYDLPVFITNYP------------TQIKPFYMQPNPDNEDTVLCADLIAPEGYG--- 352

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
                EI  G  R +  +++ Q      +     E  +       + G  PH G   G++
Sbjct: 353 -----EIIGGSERINDLDLLEQRIKEHELD----EESYSYYLDLRRYGSVPHSGFGLGLE 403

Query: 545 RIVMLLLGAKNVREVSLFPM 564
           R V  + G ++VRE S FP 
Sbjct: 404 RTVAWISGVEHVRETSPFPR 423


>gi|325142613|gb|EGC65005.1| lysyl-tRNA synthetase [Neisseria meningitidis 961-5945]
          Length = 503

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    ++ N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIIDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F +    K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|241896599|ref|ZP_04783895.1| lysyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241870080|gb|EER73831.1| lysyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 494

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 84/411 (20%), Positives = 149/411 (36%), Gaps = 39/411 (9%)

Query: 2   HRY-RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH   +L                + V ++G +   R  G I F DI+D  G  QV
Sbjct: 32  HRFDRTHMASELHTLYDDVSGEDLEAQANEVAIAGRMMTKRRSGKISFADIKDRSGRIQV 91

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
                    E  +  +   +    G       +        G++ L+   I  LS A   
Sbjct: 92  FVQKPVVGEETYEWFKKSDLGDWLGF------KGTIMKTRAGELSLNVTAITHLSKALR- 144

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           +++ R+LDL  +    +   KR++II+++R  M  + F E  TP+L
Sbjct: 145 PLPDKFHGLTDIETKYRQRYLDLIANDDSFDRFQKRSKIISAIRAYMDGDGFTEVETPML 204

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
             A+    AR F+          Y +  A + + + L+  G +R ++I   FR+E     
Sbjct: 205 QNAAGGAAARPFITHHNALNIDLY-MRIALELHLKRLIVGGMERVYEIGRVFRNEGMDPK 263

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  ++   +F +  D++   EN+ +   +  +              DD I  Y  
Sbjct: 264 HNP-EFTVMESYAAFWDLGDVMTETENIFKAAAKVVA--------------DDMIITYQE 308

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
              DL  P    ++ +         F +  +V     +                 +NE+ 
Sbjct: 309 HTIDLAKPFARKHMVDLIKEKTGVDFWQDYTVEEARAIADEKGVKYEQYWGVGHIINEFF 368

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC 399
            +  +  L    +     G+   + P+AK  +     A R  L +  G+  
Sbjct: 369 ENFVEDTLIEPTFVY---GHPVEVSPLAKKSDDDKRFAQRFELFISGGEYA 416



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K +D     A +++L  +G E A+     +      + F      +    +   G     
Sbjct: 394 KKSDDDKRFAQRFELFISGGEYANAFTELNDPIDQRERFEAQAAERAAGNDEAEGIDEDF 453

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             + + GMPP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 454 IESLEYGMPPTGGLGIGIDRLVMLLTNADTIRDVLLFPTMR 494


>gi|325134355|gb|EGC57000.1| lysyl-tRNA synthetase [Neisseria meningitidis M13399]
          Length = 503

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    ++ N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F      K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|307107552|gb|EFN55794.1| hypothetical protein CHLNCDRAFT_57712 [Chlorella variabilis]
          Length = 618

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 61/321 (19%), Positives = 127/321 (39%), Gaps = 27/321 (8%)

Query: 5   RTHSCGDLGVSDVG---------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           RTH+   L     G         + V ++G V   R  G + F  + D  G  Q+     
Sbjct: 122 RTHTAAQLQELHAGLGEGQVAEGASVAVAGRVMSRRFMGKLAFFKLVDASGSIQLYIERA 181

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                  ++  +   L   G ++             G++ ++ + +E+L+ +  LPLP  
Sbjct: 182 VLDEAQPEAFAAVKGLVDSGDIVGVRGGIKRTE--KGELSVTVESLEVLTKSL-LPLPDK 238

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                    R++ R+LD+     +      R++ I++MR  +  ++F+E  TP+L +S+ 
Sbjct: 239 WHGLSDVEQRYRKRYLDMIVTPGVVDTFKARSKTISTMRRMLEEQDFLEVETPVLESSAG 298

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+       G  + +  A + + + L+  G +R F+I   FR+E   +   P E
Sbjct: 299 GADARPFVTYHNAL-GRNFTMRIATELHLKRLVVGGLERVFEIGRIFRNEGISARHNP-E 356

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  D+++  E ++R   +       +      + +     R        
Sbjct: 357 FTSIELYQAYADYSDMMDLTEAIIRTCAQAVCGQLQLPYQGQVLDFGAPFCR-------- 408

Query: 294 RNPIIMHNVTEHFVHSEFRVF 314
                MH++       +F  F
Sbjct: 409 ---ATMHDLVRDKTGVDFEAF 426



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 54/170 (31%), Gaps = 49/170 (28%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G++  +  +  +++D P      E   +   H                        +++L
Sbjct: 470 GLVEADLQQPTFVLDHPV-----EISPLAKPHR----------------SRKGVVERFEL 508

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF---------------------- 522
              G E+A+            Q       + +    +                       
Sbjct: 509 FVVGRELANSFSELTDPVDQRQRLEAQVAAHQAAVQQQQAAAAVANGAGAAEAASGEEEA 568

Query: 523 ------GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                      A + GMPP GG+  GIDR+VMLL  + ++R+V  FP+ +
Sbjct: 569 YEVVLDEDFLAALEYGMPPTGGMGMGIDRLVMLLTDSPSIRDVIAFPLMK 618


>gi|15677284|ref|NP_274437.1| lysyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|32130177|sp|Q9JYU6|SYK_NEIMB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|7226664|gb|AAF41786.1| lysyl-tRNA synthetase, heat inducible [Neisseria meningitidis MC58]
 gi|316984545|gb|EFV63510.1| lysyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325140370|gb|EGC62891.1| lysyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325199958|gb|ADY95413.1| lysyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 503

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    ++ N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F    + K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKAQVVQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|219848798|ref|YP_002463231.1| asparaginyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|254782876|sp|B8GBG7|SYN_CHLAD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|219543057|gb|ACL24795.1| asparaginyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 440

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 72/297 (24%), Positives = 122/297 (41%), Gaps = 30/297 (10%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEIAKSVRSEWVLC 72
            VG  V L+GWV+     G +IF+ +RD  G  Q      N   A F  A+++  E    
Sbjct: 15  HVGQRVTLAGWVYHKTEKGKLIFILLRDGSGTIQCVTFKKNVSEATFATAQALTQESSCR 74

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G V +            G  EL  ++IE++  + E P+     +E+      ++R L 
Sbjct: 75  ITGSVRADER-------APGGYELDVEEIELVGPSHEYPITP---KEHGVEFLMEHRHLW 124

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R    H  +  R  +I + +  +  + F+   TPILTA++ EG  +       + G  Y
Sbjct: 125 VRSAKQHAILRIRAEVIAAAQEWLNEQGFVRFDTPILTATAAEGTTNLFATDYFDLGKAY 184

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q  Q Y +  M S F + +   P FR E  ++ R   EF+ ++ E++F + +D +  
Sbjct: 185 -LAQTGQLYVEAGMMS-FGKVYCFGPTFRAEKSKTRRHLTEFWMIEPEVAFADHEDNMRL 242

Query: 253 MENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRYGTDKPDLR 294
            E  +  +     +                      F RI YD AI      + ++ 
Sbjct: 243 QEQFVSAIVARVLDRRREDLKVLERDISLLEQVVPPFPRITYDQAIELIAAHQGEVE 299



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 14/116 (12%)

Query: 451 KIDFAHNPFTMPQGG--MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           +   A   F M       E     DLL+ + +         EI  G  R H  +++ Q  
Sbjct: 330 RFPSAVKAFYMQPDPNRPEVALCADLLAPEGYG--------EIIGGSQRIHDPDLLEQRI 381

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              G+  E  +          + G  PH G   GI+R+V  + G +++RE   FP 
Sbjct: 382 RAHGLRLEDYQ----WYLDLRRYGTVPHSGFGMGIERVVAWITGTRHIRETIPFPR 433


>gi|291295875|ref|YP_003507273.1| lysyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470834|gb|ADD28253.1| lysyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 502

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 68/358 (18%), Positives = 127/358 (35%), Gaps = 42/358 (11%)

Query: 3   RYR---THSCGDLGVSDVG---------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
            YR   TH    +  +  G           VR++G +   R  G   F  ++D  G  Q+
Sbjct: 27  PYRFPKTHDAAQILAAHAGAAPQQEWPEEEVRVAGRLMTFRHMGKASFAHLQDQSGRIQL 86

Query: 51  VANPD-SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
               D +  +++ K +    +L ++G V             TG+I +  +K   L  +  
Sbjct: 87  YLARDITEHYDLIKKLDIGDILGVEGTV---------FTTKTGEITIKVRKFVPLVKSL- 136

Query: 110 LPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
            PLP           R++ R+LDL     + +    R+R++  +R       F+E   P 
Sbjct: 137 HPLPDKWHGIRDVETRYRQRYLDLIQNPEVREVFRIRSRMVRYIRDFFDQRGFLEVEGPT 196

Query: 169 LTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L A +    A+ F          F  L  A + + + L+  GF++ F+I   +R+E    
Sbjct: 197 LQAIAGGTEAKPFKTFHNALDHEF-NLRIALELHLKRLLVGGFEKVFEIGRNYRNEGISV 255

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
              P EF  L+   ++ +  D++  +E++L G+ +                      +YG
Sbjct: 256 KHNP-EFTMLEAYWAYADYHDMMALVEDLLSGLVQHLFGSTQ--------------VQYG 300

Query: 288 TDKPDLRNPIIMHN-VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
               D   P    + V      +        L     +     P      +    D++
Sbjct: 301 EHLIDFAKPFKRIDFVATLKERAGLDFDPTDLERLRTWADQKHPELRSVPSYKLLDKL 358



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 5/96 (5%)

Query: 473 DLLSI-KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYR 527
           D        + DL   GFEI+      + +      F      +E               
Sbjct: 389 DPSKTNLTERADLFVAGFEISPIYSELNDALDQRARFQEQAKRREAGDDEEPEIDEDFLL 448

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G+  GIDR+ M+L   +++R+V LFP
Sbjct: 449 ALEYGMPPAAGMGLGIDRLAMVLTNQESIRDVILFP 484


>gi|110640530|ref|YP_668258.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli 536]
 gi|191171296|ref|ZP_03032846.1| lysyl-tRNA synthetase [Escherichia coli F11]
 gi|300988985|ref|ZP_07178881.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|28316248|emb|CAD66193.1| putative lysil-tRNA synthetase LysU [Escherichia coli]
 gi|110342122|gb|ABG68359.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli 536]
 gi|190908596|gb|EDV68185.1| lysyl-tRNA synthetase [Escherichia coli F11]
 gi|300305805|gb|EFJ60325.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|324010339|gb|EGB79558.1| lysyl-tRNA synthetase [Escherichia coli MS 60-1]
          Length = 498

 Score =  201 bits (512), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 66/311 (21%), Positives = 135/311 (43%), Gaps = 31/311 (9%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH   DL   D+   V ++G +   R  G  IF+ I+D+ G  Q+  + D         +
Sbjct: 51  TH--EDLTKKDIN--VIMAGRIMSRRIMGKSIFMHIQDNKGRIQLYCSSDILPESTFSDI 106

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           +        G ++    +       T ++ ++  +I +L+ +   PLP        + +R
Sbjct: 107 KK----LDTGDIIGIKGKLF--KTKTNELSVNCYEISLLTKSLR-PLPDKFHGLLDQELR 159

Query: 126 FKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
           ++ R++DL  +    +    R+RI+  +R  M   +F+E  TP++ +      AR F+  
Sbjct: 160 YRQRYVDLIVNHDTYRTFETRSRILTEIRRYMAEHDFMEVETPMMQSIPGGASARPFITH 219

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  +P+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ +++
Sbjct: 220 HNALDQDMF-LRISPELYLKRLVVGGFERVFEINRNFRNEGI-SPRHNPEFTMMELYIAY 277

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
            +  D++N  E++ R V +       +            F ++   ++I +YG       
Sbjct: 278 ADFHDLINFTEDLFRTVAQNVLGTTLIEYGDELFDFGKPFNKLTMRESIIKYG------- 330

Query: 295 NPIIMHNVTEH 305
           N I + ++ + 
Sbjct: 331 NGITLTDIDDI 341



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 60/155 (38%), Gaps = 10/155 (6%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEE--EKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           A++LGI      E  W +     E  EE  E+ +         P       + ND   + 
Sbjct: 348 ARKLGI----TVEPSWGVGRLQSEIFEEVVEQHLIQPTFITEYPAEISPLARRNDKNPLY 403

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++      EI +G    + +E   + F     +KE  +            A + GMP
Sbjct: 404 TDRFEFFIGKREIGNGFSELNDAEDQAERFKEQVKAKEAGDEEAMYYDEDYVTALEYGMP 463

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           P  G+  GIDR++ML      +R+V +FP  +   
Sbjct: 464 PTAGLGIGIDRMIMLFTNCHTIRDVIMFPAMRTSK 498


>gi|310658261|ref|YP_003935982.1| lysine tRNA synthetase, inducible [Clostridium sticklandii DSM 519]
 gi|308825039|emb|CBH21077.1| lysine tRNA synthetase, inducible [Clostridium sticklandii]
          Length = 506

 Score =  201 bits (512), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 67/344 (19%), Positives = 144/344 (41%), Gaps = 25/344 (7%)

Query: 1   MHRY-RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           + +Y +TH    +        GS V L+G +  +R HG   F+DI+D  G  QV    D+
Sbjct: 37  IEKYIKTHHSKQVKDNFEKLEGSEVSLAGRIMSMRGHGKASFIDIQDEQGRIQVYVRQDA 96

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +      +  +    G ++         N   G+  + A K+ +L+ + ++ LP   
Sbjct: 97  IGDDSYTDFVTYDM----GDIIGVEGTVFMTN--KGEQSVKASKVALLTKSLQI-LPEKY 149

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                  +R++ R++DL  +   K     R++ I +++  +   +F+E  TPIL+  +  
Sbjct: 150 HGLKDPDLRYRQRYVDLIVNPDVKEAFLIRSKAIKALKEYLDERDFLEVDTPILSTIAGG 209

Query: 176 G-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+          Y +  A + Y + L+  GF+R +++   FR+E       P E+
Sbjct: 210 ATARPFITHHNTLDIDMY-MRIANELYLKRLIVGGFERVYELGKMFRNEGMSIKHNP-EY 267

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRR 285
             +++  ++ + +DI+   E  +  + ++      ++           + R+   DAI+ 
Sbjct: 268 TAIEVYQAYADYEDIMRLTEEAVACMAQKSLGTTKINYQGTEIDLTPPWRRLSMIDAIKE 327

Query: 286 Y-GTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           + G D  +++       V +        V ++   +   +E + 
Sbjct: 328 FKGIDFNEIQTDEEAIKVAKENHIEITPVMNRGFVIAAMFEEFC 371



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 11/132 (8%)

Query: 442 FYEWNEEEKKIDFA---HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            +E   EE  I      H+P  +      +   +D       +++   N +EIA+     
Sbjct: 366 MFEEFCEEHLIQPTFITHHPVEVSPLSKRN--PDDPR--LTNRFEAFVNTWEIANAFSEL 421

Query: 499 HMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      + F +    +E+ ++           A + G+PP GG+  GIDR++MLL  + 
Sbjct: 422 NDPIDQRERFMDQLKQRELGDDEAYMLDEDFLNAIEVGLPPTGGLGIGIDRVIMLLTNSS 481

Query: 555 NVREVSLFPMSQ 566
           ++R+V LFP  +
Sbjct: 482 SIRDVILFPTMK 493


>gi|317131158|ref|YP_004090472.1| lysyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469137|gb|ADU25741.1| lysyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 505

 Score =  201 bits (512), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 69/292 (23%), Positives = 119/292 (40%), Gaps = 21/292 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
              G  V ++G +   R  G   F+D+ D  G  QV    +    E   S +   +  I 
Sbjct: 63  ELEGKEVSIAGRLMSRRDMGKANFIDVHDATGRMQVYVRVNDVGEESFASFKKWDIGDIV 122

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G+      +        G+I + A  +  L     LPLP          +R++ R+LDL 
Sbjct: 123 GV------KGKVFRTRRGEISIHATAVT-LLSKSLLPLPEKFHGLKDTELRYRQRYLDLI 175

Query: 135 RDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +   K   V+R+RII  +R  +  + FIE  TPIL        AR F+          Y
Sbjct: 176 MNPEVKETFVRRSRIIAFIRSFLEQKGFIEVETPILNVIPGGAAARPFITHHNTLDMDLY 235

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  G ++ F+I   FR+E       P EF  +++  ++ + + ++  
Sbjct: 236 -LRIAPELYLKRLIVGGMEKVFEIGRLFRNEGIDVKHNP-EFTSIEIYQAYTDYNGMMRL 293

Query: 253 MENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY-GTDKPDLR 294
            E ++ G  +       +         +  + R+   +A++ Y G D   LR
Sbjct: 294 TEELVAGAAQTVLGTMKITCGGEEIDLTPPWRRLTMVEAVKTYTGIDFDVLR 345



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 25/144 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +     +  +I+D+P               +P T  +     L           +++   
Sbjct: 380 VEEQLVQPTFILDYP------------IEVSPLTKRKADRPEL---------TERFEFFI 418

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAG 542
              E+ +     +      + F      +   +   G        A + GMPP GG+  G
Sbjct: 419 LRREMGNAYSELNDPIDQRERFLRQVELRNAGDLEAGMMDEDFVTALEYGMPPTGGLGIG 478

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQ 566
           IDR+VMLL  + ++R+V LFP  +
Sbjct: 479 IDRLVMLLTDSPSIRDVLLFPTMK 502


>gi|22297756|ref|NP_681003.1| lysyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|34222748|sp|Q8DMA9|SYK_THEEB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|22293933|dbj|BAC07765.1| lysyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 506

 Score =  201 bits (512), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 59/309 (19%), Positives = 123/309 (39%), Gaps = 21/309 (6%)

Query: 1   MHRY-----RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI 47
           M  Y     RTH+   L            VG  V ++G +   R  G + F  ++D  G 
Sbjct: 27  MSPYAYRWERTHTAALLQDKYAHLAAGEAVGDRVSVAGRIMARRIFGKLAFFTLQDDSGT 86

Query: 48  TQVVANPDSACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSV 106
            Q+  +  +    + ++  ++     D G ++             G++ +  +   +L+ 
Sbjct: 87  IQLYLDKQTISQTMGEAAFADLKHLTDVGDILGAVGTLKRTE--KGELSVVVESYTMLTK 144

Query: 107 AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECS 165
           +  LPLP           R++ R++DL  +   ++  + R  I  ++R  +  + FIE  
Sbjct: 145 SL-LPLPDKWHGLTDVEKRYRQRYVDLIVNPQVRDTFRKRALITAAIRRYLNEQGFIEIE 203

Query: 166 TPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
           TP+L   +    AR F+      +   Y L  A + + + L+  GF++ +++   FR+E 
Sbjct: 204 TPVLQVEAGGAEARPFITYHNTLEMQLY-LRIATELHLKRLIVGGFEKVYELGRIFRNEG 262

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
             +   P EF  +++  ++ + +D++   E ++     E      ++     I      R
Sbjct: 263 ISTKHNP-EFTSIEVYQAYADYNDMMTLTEAIITTGAMEVLGTLKITYQGETIDLTPPWR 321

Query: 285 RYGTDKPDL 293
           R       L
Sbjct: 322 RVTMHDAVL 330



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 60/166 (36%), Gaps = 33/166 (19%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
             L  C       N + ++  I+     +  +++D+P      E   +   H        
Sbjct: 356 KDLDTCDTIGRVLNEVFEQ--IVEPTLIQPTFVLDYPV-----EISPLAKPHR------- 401

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS-------EVMLQAFSNVGISKEV 517
                           +++L   G E A+               E   +  +   ++   
Sbjct: 402 ---------SQPGLVERFELFIVGREHANSFSELTDPLDQRQRLEEQARRKAAGDLAAHS 452

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           V+  F     A + GMPP GG+  GIDR+VMLL  + ++R+V  FP
Sbjct: 453 VDEDF---LTALEHGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFP 495


>gi|325849665|ref|ZP_08170868.1| lysine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480006|gb|EGC83084.1| lysine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 637

 Score =  201 bits (512), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 71/348 (20%), Positives = 141/348 (40%), Gaps = 24/348 (6%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +    D      G  VR++G +   R HG + F+D++D  G  QV  N  +   +  K  
Sbjct: 41  SKEIKDNFEEFEGKVVRVAGRIMARRGHGNMSFMDVQDSLGQIQV-VNRKNVMGDNFKET 99

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           +   +  + G+      E        G++ +  +  ++L+ + ++ LP          IR
Sbjct: 100 KGYDIGDLIGI------EGKVFKTNQGEVSIETEHADLLTKSLQI-LPEKWHGLKDPDIR 152

Query: 126 FKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
           ++ R++DL  +   K+  V R++II+ +R  +    F+E  TPIL   +    AR F+  
Sbjct: 153 YRQRYVDLIVNPEVKDVFVLRSKIISEIRRFLENRGFLEVETPILNTIAGGATARPFITH 212

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  A + Y + L+  GFD+ ++I   FR+E   +   P EF  +++  ++
Sbjct: 213 HNSLDIGMY-LRIASELYLKRLIVGGFDKVYEIGRMFRNEGMDATHNP-EFTTMELYQAY 270

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            + +D++   E ++  V  +      V  +   I      RR           + M +  
Sbjct: 271 GDFEDMMEITETMVEYVANKVKGSTVVEFDGNEIELKAPWRR-----------VSMIDAV 319

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           + F   +F   ++        +   I  K   G     +  +E+   +
Sbjct: 320 KEFSGVDFNEITEYEDAVKIAKEKNIEVKDSRG-EIIAEFFDEFVEEK 366



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 71/195 (36%), Gaps = 32/195 (16%)

Query: 376 AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435
            K  + V+   I         D+        ++      +       E   +     +  
Sbjct: 319 VKEFSGVDFNEITE-----YEDAVKIAKEKNIEVKDSRGEIIAEFFDEF--VEEKLIQPT 371

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           +I+D+P               +P    +    SL          ++++   NG EIA+  
Sbjct: 372 FIVDYP------------VEISPLAKRKNDDPSL---------TYRFEAFINGSEIANAF 410

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
              + +    + F +    +E  ++           A + GMPP GG+  GIDR++M+L 
Sbjct: 411 SELNDAVDQKERFLDQVAKREAGDDEAQMMDYDFVNALEVGMPPTGGLGIGIDRLIMILT 470

Query: 552 GAKNVREVSLFPMSQ 566
           G  ++R+V LFP  +
Sbjct: 471 GQHSIRDVLLFPTMK 485


>gi|317482148|ref|ZP_07941171.1| lysyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916382|gb|EFV37781.1| lysyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 560

 Score =  201 bits (512), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 107/563 (19%), Positives = 196/563 (34%), Gaps = 125/563 (22%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANPDSACFEIAKSVR 66
            G+     VG    ++G V  +R  GG+ F+ +   D   I  +++  +      A S++
Sbjct: 108 AGEETEDMVG----IAGRVLFLRNAGGLCFVQLSAGDGTKIQGMISKKEIG----ADSLK 159

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G  +      I +   TG++ + A +  I S A +    +   ++  E  R 
Sbjct: 160 QFKQLVDLGDHLYLKGRVIASK--TGELSVFATEWAIASKALQPLPAL--HKDLNEDTRT 215

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           +  ++ +  D   +N+ + R++ + S+R      +F+E  TP+L        AR F    
Sbjct: 216 RKPYIGMIADENIRNMARNRSKAVASLRRTFDDHDFLEVETPMLQTLHGGAAARPFTTHM 275

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ + +  +  G DR F+I   FR+E   +   P EF  ++   ++ 
Sbjct: 276 NAFDLDLY-LRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYG 333

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             D I   ++ +++                       A+  YG+ K      + + + TE
Sbjct: 334 TYDSIGQLVKELVQK---------------------TAMDVYGSHK------VTLLDGTE 366

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +    E++  S   S++       +P  G                    PG         
Sbjct: 367 YDFGGEWKTISMYDSLSESLGEEIVPNGGPD-----------------APGT-------- 401

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
              +V  +G +A  L +        R D+++                       H+ +  
Sbjct: 402 ---SVEHLGAIADKLGVE-------RDDVENH-----------------GKLVEHLWEHF 434

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                  +E  ++ DFP      E   +   H                        ++DL
Sbjct: 435 --YEDKLYEPTFVRDFPV-----ETSPLVKGHR----------------TKPGVVEKWDL 471

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIA 540
              GFE+A+G    +   V  + F          +            A   GMPP GG+ 
Sbjct: 472 YVRGFELATGYSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMG 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            GIDR+++ L GA  +RE   FP
Sbjct: 532 MGIDRLLIALTGA-TIRETITFP 553


>gi|261401860|ref|ZP_05987985.1| lysine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269207986|gb|EEZ74441.1| lysine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 503

 Score =  201 bits (512), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 70/310 (22%), Positives = 129/310 (41%), Gaps = 30/310 (9%)

Query: 4   YRTHSCGDLGVS--DVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
            R     DL     D+G          V+++G +   R  G   F  I+D  G  Q+  N
Sbjct: 41  KRDSFAADLHAQYGDIGKEELDPQAVPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLN 100

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
                 E+        +  I G      AE        G++ +    I +LS +   PLP
Sbjct: 101 NKGVSQEVLDDFNHWDLGDIVG------AEGTLFKTNHGELTVRVSDIRLLSKSLR-PLP 153

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA- 171
              +    +  +++ R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++   
Sbjct: 154 DKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPI 213

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                A+ F+          Y L  AP+ Y + L+  G +R F+I   FR+ +  S R  
Sbjct: 214 PGGATAKPFVTHHNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHN 271

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDA 282
            EF  ++   +F + + ++   E+++R      +    ++ N         F R+   +A
Sbjct: 272 PEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEA 331

Query: 283 IRRYGTDKPD 292
           I++Y     D
Sbjct: 332 IKKYNPHYTD 341



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F      K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|290969241|ref|ZP_06560766.1| lysine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290780747|gb|EFD93350.1| lysine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 510

 Score =  201 bits (512), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 69/334 (20%), Positives = 133/334 (39%), Gaps = 23/334 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VRL+G +  +R HG   F  +RD  G  QV    D    +     +   +  I G+    
Sbjct: 66  VRLAGRLMAIRRHGKTAFCVLRDISGEIQVYFRKDLLGEDSYTLFKLLDIGDIIGV---- 121

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E       TG+  +     ++L+ A   PLP        +  R++ R+LDL  +   K
Sbjct: 122 --EGTVFTTHTGETTIRVSDWKLLTKALR-PLPEKFHGLTDKETRYRQRYLDLIVNPEVK 178

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  +KR++II  +R  +    F+E  TP+L T +    AR F           Y L  AP
Sbjct: 179 DTFIKRSKIIKGIRRYLDERGFLEVETPMLHTIAGGAAARPFKTYHHALDMDMY-LRIAP 237

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+  G +R +++  CFR+E   +   P EF  +++  +F + +D++   E+++ 
Sbjct: 238 ELHLKRLLVGGLERVYEMNRCFRNEGIDTRHNP-EFTTVELYQAFGDLEDVIAITEDIVA 296

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
            + ++      ++     I      +R           + M      F   +F   + + 
Sbjct: 297 TLAKQLYGTTKITYLDTEIDLTPPWKR-----------MTMIEAVAEFTGKDFTGVTDLA 345

Query: 319 SVNPGYEVWAIPAKGGGGNRAFCDR-MNEWARSQ 351
           +     +   +P     G     +    E+   +
Sbjct: 346 AAQAIADELQVPYGKFDGIGKIINACFEEYVEEK 379



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 8/170 (4%)

Query: 401 FIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
           F   D       AA     IA EL +          I++  F E+ EE  K+        
Sbjct: 333 FTGKDFTGVTDLAAA--QAIADELQVPYGKFDGIGKIINACFEEYVEE--KLIQPTIITG 388

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
            P       K      +  ++++    G E+A+G    +      + F+     +E  ++
Sbjct: 389 HPLEISPLTKQQRENPLLTYRFEAFIYGRELANGFSELNDPLDQRRRFTAQMEERERGDD 448

Query: 521 RF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                     RA + G+PP GG+  GIDR+VM L  + ++R+V LFP  +
Sbjct: 449 EAHQMDEDYCRALEYGLPPTGGLGIGIDRLVMFLTDSASIRDVLLFPTMK 498


>gi|306821054|ref|ZP_07454672.1| lysine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550890|gb|EFM38863.1| lysine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 500

 Score =  201 bits (512), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 63/313 (20%), Positives = 126/313 (40%), Gaps = 24/313 (7%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH    +     +  G  V ++G +   R  G   F+D++D  G  Q  A  D    E+ 
Sbjct: 38  THHSKQIKDDFENFEGKEVSVAGRMMSFRSFGKSTFVDVQDKDGKIQCYAKKDELGEELY 97

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K+ +   +  I G+        +       +I +    +++LS +  + LP         
Sbjct: 98  KAFKEFDIGDIIGV------TGVVFKTQKDEISIKMHDVKLLSKSLRI-LPEKYHGLKDM 150

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDF 180
            +R++ R++DL  +   K     R + I ++R  +    FIE  TPIL   +    AR F
Sbjct: 151 DLRYRQRYVDLIVNPEVKEAFLTRNKAIKALREFLEQREFIEVETPILNTIAGGATARPF 210

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + Y + L+  GF++ +++   FR+E       P E+  +++ 
Sbjct: 211 ITHHNTLDIDMY-LRIANELYLKRLIVGGFEKVYEMGRMFRNEGMDIKHNP-EYTAMELY 268

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGT-DK 290
            ++ + +DI+   E ++  +    +    ++           + R+   DAI+ Y   D 
Sbjct: 269 QAYADYEDIMKLTEELVAYMAVAATGSTLINYQGKQIDLKPPWRRLSMTDAIKEYANIDF 328

Query: 291 PDLRNPIIMHNVT 303
            D++       + 
Sbjct: 329 EDIKTDEEAVELA 341



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 11/131 (8%)

Query: 443 YEWNEEEKKIDFA---HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           +E   E+K I+     H+P  +      +    D       +++   N +EIA+     +
Sbjct: 362 FEKYCEDKLINPTFITHHPVEISPLSKRN--PEDPR--ITNRFEAFVNTWEIANAFSELN 417

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                   F +    +E+ +            A + G+PP GG+  GIDR++MLL  + +
Sbjct: 418 DPIDQRARFMDQLRQRELGDEEAQMLDEDFLNAIEVGLPPTGGLGIGIDRVIMLLTNSAS 477

Query: 556 VREVSLFPMSQ 566
           +R+V LFP  +
Sbjct: 478 IRDVILFPTMK 488


>gi|239621546|ref|ZP_04664577.1| lysyl-tRNA synthetase 1 [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|312133944|ref|YP_004001283.1| lysu [Bifidobacterium longum subsp. longum BBMN68]
 gi|239515421|gb|EEQ55288.1| lysyl-tRNA synthetase 1 [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|311773240|gb|ADQ02728.1| LysU [Bifidobacterium longum subsp. longum BBMN68]
          Length = 560

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 106/563 (18%), Positives = 191/563 (33%), Gaps = 125/563 (22%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANPDSACFEIAKSVR 66
            G+     VG    ++G V  +R  GG+ F+ +   D   I  +++  +      A S++
Sbjct: 108 AGEETEDMVG----IAGRVLFLRNAGGLCFVQLSAGDGTKIQGMISKKEIG----ADSLK 159

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G  +      I +   TG++ + A +  I S A +    +   ++  E  R 
Sbjct: 160 QFKQLVDLGDHLYLKGRVIASK--TGELSVFATEWAIASKALQPLPAL--HKDLNEDTRT 215

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           +  ++ +  D   +N+V+ R++ + S+R      +F+E  TP+L        AR F    
Sbjct: 216 RKPYIGMIADENIRNMVRNRSKAVASLRRTFDDHDFLEVETPMLQTLHGGAAARPFTTHM 275

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ + +  +  G DR F+I   FR+E   +   P EF  ++   ++ 
Sbjct: 276 NAFDLDLY-LRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYG 333

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             D I   ++ +++                       A+  YG+ K      + + + TE
Sbjct: 334 TYDSIGQLVKELVQK---------------------TAMDVYGSHK------VTLLDGTE 366

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +    E++  S   S++       +P  G        + +   A   G            
Sbjct: 367 YDFGGEWKTISMYDSLSEALGEEIVPNGGPEHPGTSVEHLGAIADKLG-----------V 415

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E  +V   G + +HL                                             
Sbjct: 416 ERDDVENHGKLVEHLWEH------------------------------------------ 433

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                  +E  ++ DFP      E   +   H                        ++DL
Sbjct: 434 -FYEDKLYEPTFVRDFPV-----ETSPLVKGHR----------------TKPGVVEKWDL 471

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIA 540
              GFE+A+G    +   V  + F          +            A   GMPP GG+ 
Sbjct: 472 YVRGFELATGYSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMG 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            GIDR+++ L GA  +RE   FP
Sbjct: 532 MGIDRLLIALTGA-TIRETITFP 553


>gi|332529458|ref|ZP_08405417.1| lysyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332041104|gb|EGI77471.1| lysyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 512

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 60/285 (21%), Positives = 123/285 (43%), Gaps = 25/285 (8%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +   R  G   F  ++D  G  Q+    D+   E+  + +   +    G +++  
Sbjct: 74  SVAGRMMLKRVMGKASFATLQDATGRIQLYVTRDAVGEEVYAAFKHWDL----GDILA-- 127

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
           AE       TG++ ++  +I +L+ +   P+P        + ++++ R++DL  D   + 
Sbjct: 128 AEGTVFKTKTGELSINVSQIRLLTKSLR-PMPDKFHGMADQEMKYRQRYVDLITDEEARK 186

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
               R++ ++S+R  M+   F+E  TP+L        A+ F+          + L  AP+
Sbjct: 187 RFAARSKAVSSIRDYMVQNGFLEVETPMLHPIPGGANAKPFVTHHNALDQEMF-LRIAPE 245

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +  D++   E+++R 
Sbjct: 246 LYLKRLIVGGFERVFEINRSFRNEGI-SVRHNPEFTMMEFYAAYWDYQDLMTYTESLIRH 304

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           V ++      ++              YG    DL  P     + E
Sbjct: 305 VAQKAVGSLQLT--------------YGGKPVDLSQPFERLTIRE 335



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           ++E   EEK        F M      S   + +D       +++L   G E  +G    +
Sbjct: 382 YFEEVVEEKLWQPT---FVMEHPVEISPLARASDKHPEVTERFELYITGREFGNGFSELN 438

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            +E   + F +   +K+  ++          RA + GMPP GG   G+DR++MLL  + +
Sbjct: 439 DAEEQARRFQSQVEAKDSGDDEAMYYDHDYVRALEYGMPPTGGCGVGLDRLMMLLTDSPS 498

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 499 IRDVILFP 506


>gi|73540772|ref|YP_295292.1| lysyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|123760232|sp|Q473I5|SYK_RALEJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|72118185|gb|AAZ60448.1| Lysyl-tRNA synthetase, class-2 [Ralstonia eutropha JMP134]
          Length = 516

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 63/308 (20%), Positives = 121/308 (39%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVS--DVGS--------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH    L     +            V ++G +   R  G   F  ++D  G  Q     D
Sbjct: 51  THQAAALHEQYGETDQPALEATPVEVAIAGRMMLKRVMGKASFATVQDGSGQIQFYITRD 110

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               ++  + +   +  I       SA  +      G++ +  Q++ +LS +   PLP  
Sbjct: 111 KVGEDVYAAFKHWDLGDI------ISARGVLFRTNKGELSVQVQELRLLSKSLR-PLPDK 163

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + ++++ R++DL            RT+ ++S+R  M    F+E  TP+L     
Sbjct: 164 FHGLADQEMKYRQRYVDLIVSPETRNTFRARTKAMSSLRRHMSDAGFMEVETPMLHPIPG 223

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + +  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 224 GAAAKPFITHHNALDMQMF-MRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 281

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIR 284
           F  ++   ++ +   +++  EN++R    + S             +S  F R+    AI+
Sbjct: 282 FTMMEFYAAYTDYRWLMDFTENLIRQAAIDASGTAVLTYQGRELDLSKPFHRLTICQAIQ 341

Query: 285 RYGTDKPD 292
           ++     D
Sbjct: 342 KFAPQYTD 349


>gi|328950625|ref|YP_004367960.1| Lysyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328450949|gb|AEB11850.1| Lysyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 499

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 71/359 (19%), Positives = 141/359 (39%), Gaps = 39/359 (10%)

Query: 2   HRY-RTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           +RY +TH    +  +  G          VRL+G +  +R  G + F  + D  G  Q+  
Sbjct: 28  YRYPKTHDAAQILEAHAGAGPGEEWPEVVRLAGRLVALRRMGKVTFAHLLDGSGRIQLYF 87

Query: 53  NP-DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
           N  ++  + + K +    ++ ++G V             TG+I +   +  +L  +   P
Sbjct: 88  NKQETPDYNLLKKLDIGDIIGVEGTV---------FTTKTGEITVRVTRWTLLVKSLR-P 137

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT 170
           LP        + +R++ R+LDL  +   + + K R +I+  +R  +    F+E  TP++ 
Sbjct: 138 LPDKWHGIRDKEVRYRQRYLDLIVNPEVREVFKKRAQIVRFVRRFLEDRGFLEVETPVIV 197

Query: 171 ASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
            ++    AR F        G+ + L  A +   + L+  GF++ F+I   FR+E   +  
Sbjct: 198 PTAGGTEARPFRTYHNAL-GTEFELRIALELPLKRLLVGGFEKVFEIGRVFRNEGIDAQH 256

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  L++  ++ + +D+   +E++L  + +      TV               Y   
Sbjct: 257 NP-EFTMLELYWAYADYNDVAQLVEDLLSSLAKAIHGSYTVP--------------YQGR 301

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKI-LSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
           + D   P    +  E         F  + L     +     P      +    D++ E 
Sbjct: 302 EIDFTPPFKRISFVETLKERAGLDFDPLDLEQLQRWARAKHPEFADVPSYKLLDKLFEH 360



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 49/141 (34%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +    +   ++ DFP             A +P          L           ++DL  
Sbjct: 362 VEAELWNPTFVYDFPL------------AISPLAKKHREKPGL---------TERWDLFV 400

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAG 542
            G E+A      +        F      +E  +    G       A +  MPP GG+  G
Sbjct: 401 AGLELAPAYSELNDPLDQRARFEEQARRREAGDEEAHGYDEDFLVALEHAMPPAGGLGIG 460

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR+ M+L    ++R+V LFP
Sbjct: 461 IDRLTMILTDMPSIRDVILFP 481


>gi|296125772|ref|YP_003633024.1| lysyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296017588|gb|ADG70825.1| lysyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 507

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 68/330 (20%), Positives = 134/330 (40%), Gaps = 22/330 (6%)

Query: 4   YRTHSCGDL--GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           Y++H   +    +    + V ++G +   R  G   FL I+D  G  Q     D    E 
Sbjct: 47  YKSHDIAEKFDELEKNQTEVSIAGRIMLYRVMGKSSFLTIKDSQGTIQAYIQRDKVGDEF 106

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             +V     L   G ++            TG+I + A ++++L+ +   PLP        
Sbjct: 107 YNTVFK--KLIDIGDIVGIKGTVF--KTKTGEITVYASELKLLTKSL-NPLPEKFHGLTD 161

Query: 122 ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
             +R++ R++DL  +  + +  +KR+++I+++R  MI  NF+E  TP++        A+ 
Sbjct: 162 TELRYRQRYVDLIMNDDVKEAFIKRSKMISAIREVMIEHNFLEVETPMMHPLIGGAKAKP 221

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+        + Y L  AP+ Y + L+  GFDR F++   FR+E   +   P EF  ++ 
Sbjct: 222 FVTHHNTLDMTLY-LRIAPELYLKRLVVGGFDRVFELNRNFRNEGISTRHNP-EFTMMEA 279

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            M++     ++  +E+V   V  + +   T       I +     R           + M
Sbjct: 280 YMAYANFYKVMELVEDVFSKVCYKLNGKYTSVYKDYEINFKPPFAR-----------VPM 328

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
            ++ +     +F             +   +
Sbjct: 329 VDLVKEHSGLDFNAIESDDEAIEKAKSIGV 358



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   EEK I               S    D   I   +Y+L   G E+++G    +   
Sbjct: 377 FEDRVEEKLIQPTFVINYPKAVSPLSKSYPDNPDI-TERYELFIGGMELSNGFSELNDPV 435

Query: 503 VMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F     +K   E+           A + G+PP GG+  GIDR+ +L L A ++R+
Sbjct: 436 DQKERFEEQLKAKARGEDETMDMDLDYINALEYGLPPTGGLGIGIDRMAILFLNAASIRD 495

Query: 559 VSLFPMSQNF 568
             LFP  +  
Sbjct: 496 TILFPQMRKS 505


>gi|225350977|ref|ZP_03742000.1| hypothetical protein BIFPSEUDO_02556 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158433|gb|EEG71675.1| hypothetical protein BIFPSEUDO_02556 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 558

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 105/575 (18%), Positives = 192/575 (33%), Gaps = 130/575 (22%)

Query: 6   THSCGDLGVSDVGS---------FVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANP 54
           T +  ++     G           V ++G V  +R  GG+ F+ +   D   I  +++  
Sbjct: 91  TATIEEVRAKYDGKLEAGDETEDVVGIAGRVLFLRNAGGLCFVQLSAGDGTKIQGMISKK 150

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           +      A S++    L   G  +      I +   TG++ + A +  I + A +    +
Sbjct: 151 EIG----ADSLKQFKQLVDLGDHLFIKGRVIASK--TGELSVFATEWAIAAKALQPLPAL 204

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
              ++  E  R +  ++ +  D  +   +  R++ + S+R      +F+E  TP+L T  
Sbjct: 205 --HKDLNEDTRTRKPYIGMIADEKMRNMVRNRSKAVASLRKTFADHDFLEVETPMLQTVH 262

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F           Y L  AP+ + +  +  G DR F+I   FR+E   +   P 
Sbjct: 263 GGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAP- 320

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  ++   ++   D I   ++ +++                     D A+  +GT K  
Sbjct: 321 EFTMVEAYQAYGNYDTIGALVKQLVQ---------------------DTAMDVFGTHK-- 357

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
               + + + +E+    E++  S   S++       +P  G        + +   A   G
Sbjct: 358 ----VTLLDGSEYDFGGEWKTISMYDSLSEALGEEIVPNGGPDNPGTSVEHLGAIADKLG 413

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
                       E  +V   G + +HL                                 
Sbjct: 414 -----------VERDDVENHGKLVEHLWEH------------------------------ 432

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                              FE  ++ DFP      E   +   H                
Sbjct: 433 -------------FYEDKLFEPTFVRDFPV-----ETSPLVKGHR--------------- 459

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRA 528
                   ++DL   GFE+A+G    +   V  + F          +            A
Sbjct: 460 -SKPGVVEKWDLYVRGFELATGYSELNDPVVQRERFVAQAKDALAGDEEACDIDEDFLEA 518

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              GMPP GG+  GIDR+++ L GA  +RE   FP
Sbjct: 519 LGVGMPPAGGMGMGIDRLLIALTGA-TIRETITFP 552


>gi|319892446|ref|YP_004149321.1| Asparaginyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162142|gb|ADV05685.1| Asparaginyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323464451|gb|ADX76604.1| asparaginyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 430

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 79/322 (24%), Positives = 127/322 (39%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
            + +G  V +  W+   R  G I FL +RD  G  Q   V A+ D   F+ AKS+  E  
Sbjct: 9   KNKIGQEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKADVDEDIFQRAKSLTQETS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++  A + P+     + +       +R 
Sbjct: 69  LYVTGEITEDNRSDL-------GYEMQVKNIEVIHEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II +         F +   PILTAS+PEG  +       ++ +
Sbjct: 119 LWLRSKKQHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDEDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A  + + F   P FR E  ++ R   EF+ ++ EM+F   ++ L
Sbjct: 179 F--LSQSGQLYMEAA-AMAYGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTTHEESL 235

Query: 251 NTMENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDAI+     G D   
Sbjct: 236 EVQEAYVSYVVQSVLKNCQIELKLLERDTSKLEKVQAPFPRISYDDAIKFLHEAGFDDIK 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
             +     + T    H +  VF
Sbjct: 296 WGDDFGAPHETAIANHYDLPVF 317



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 70/213 (32%), Gaps = 33/213 (15%)

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCF--FIAGDPLKFCSFAADARN 418
             + E+     +  V K+  I      R    ++   + F      D +KF   A     
Sbjct: 235 LEVQEAYVSYVVQSVLKNCQIELKLLERDTSKLEKVQAPFPRISYDDAIKFLHEAGFDDI 294

Query: 419 HIAQELGIINCNCFE-----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKG 471
               + G  +            +I+++P                PF M       +++  
Sbjct: 295 KWGDDFGAPHETAIANHYDLPVFIVNYP------------TKIKPFYMQPNPENEDTVLC 342

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            DL++ + +         EI  G  R +  E++ Q      +        +       + 
Sbjct: 343 ADLIAPEGYG--------EIIGGSERINDLELLEQRIDEHQLDT----ESYQYYLDLRKY 390

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G  PH G   G++R V  + G ++VRE S FP 
Sbjct: 391 GSVPHSGFGLGLERTVAWIAGVEHVRETSPFPR 423


>gi|225024787|ref|ZP_03713979.1| hypothetical protein EIKCOROL_01674 [Eikenella corrodens ATCC
           23834]
 gi|224942494|gb|EEG23703.1| hypothetical protein EIKCOROL_01674 [Eikenella corrodens ATCC
           23834]
          Length = 506

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 70/303 (23%), Positives = 125/303 (41%), Gaps = 23/303 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+++G +   R  G   F  ++D  G  Q+  N      +I +  +   +  I G    
Sbjct: 66  TVKVAGRMMLQRDMGKASFATLQDVSGQIQLYVNDQGVGEKIHEEFKHWDLGDILG---- 121

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
             AE +      G++ +   +I +L+ A   PLP        +  R++ R+ DL  +   
Sbjct: 122 --AEGVLFKTNHGELTVRVSQIRLLAKALR-PLPDKVHGLKDQETRYRQRYADLIVNAES 178

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
           + I K R RII ++R  M  E ++E  TP++   +    AR F+          + +  A
Sbjct: 179 REIFKKRGRIIQTIRNFMTGEQYLEVETPMMHPIAGGAAARPFVTHHNALDIPLF-MRIA 237

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   +F +   +++  E V+
Sbjct: 238 PELYLKRLVVGGFERVFEINRNFRNEGVSARHNP-EFTMMEFYEAFSDYHRMMDMTEGVI 296

Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPDLR---NPIIMHNVTEH 305
           R           V  N         F R+   DAI++Y     D +      +   V +H
Sbjct: 297 RACANAVCGSLHVPYNGKEVDLEKRFDRLTIVDAIKKYNPHYTDEQLNDEEWLKKEVVKH 356

Query: 306 FVH 308
              
Sbjct: 357 GED 359



 Score =  100 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 27/168 (16%)

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
            G+ L         +  + +  G      +   +I+D+P                     
Sbjct: 356 HGEDLPAAPGIGSLQLALFE--GCAEGKLWNPTFIIDYP--------------------- 392

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVV 518
                  + +D       +++L   G E+A+G    +  E     F +    K    +  
Sbjct: 393 VEVSPLARASDTNPKLTERFELFAVGRELANGYSELNDPEDQADRFRSQVAQKEAGDDEA 452

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            N      RA + G+PP GG   GIDR+VMLL  A ++R+V LFP  +
Sbjct: 453 MNYDADYIRAMEYGLPPTGGCGIGIDRLVMLLTNAPSIRDVILFPHMR 500


>gi|253999564|ref|YP_003051627.1| lysyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|313201598|ref|YP_004040256.1| lysyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|253986243|gb|ACT51100.1| lysyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|312440914|gb|ADQ85020.1| lysyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 504

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 60/285 (21%), Positives = 123/285 (43%), Gaps = 20/285 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            +      V ++G +   R  G   F  ++D  G  Q+  + +S   E+  + +   +  
Sbjct: 60  TLEPANVQVSVAGRMMLKRVMGKASFATLQDKSGRIQLFISKESIGEELYDAFKKWDM-- 117

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G +++  A  +     TG++ +   ++ +L+ +   PLP        +  +++ R++D
Sbjct: 118 --GDILA--ARGVVFKTKTGELSIKVSELRLLTKSLR-PLPEKFHGLSDQETKYRQRYVD 172

Query: 133 LR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L   D   +  + R++I+ ++R  M+   F+E  TP+L        A+ F+         
Sbjct: 173 LIVSDDTRQTFIARSKIVAAIRSFMLGNEFLEVETPMLHPIPGGASAKPFITHHNALDMQ 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   ++
Sbjct: 233 MY-MRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SVRHNPEFTMMEFYAAYTDYKWLM 290

Query: 251 NTMENVL---------RGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +  EN +           V E       +S  F R+    AI++Y
Sbjct: 291 DFTENCIRAAAIAARGTAVLEYQGRTLDLSQPFQRLTIVGAIQKY 335



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 57/307 (18%), Positives = 106/307 (34%), Gaps = 41/307 (13%)

Query: 275 LRICYDDA--IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
             I + +A  ++ Y    P+L    ++    E          ++ +SV    E   +   
Sbjct: 221 PFITHHNALDMQMYMRIAPELYLKRLIVGGFERVFEINRNFRNEGVSVRHNPEFTMMEFY 280

Query: 333 GGGGNRAFCDRMNE------WARSQGQPGLAYIFWRLDESGN---VAGMGPVAKHLNIVN 383
               +  +     E         ++G   L Y    LD S     +  +G + K+     
Sbjct: 281 AAYTDYKWLMDFTENCIRAAAIAARGTAVLEYQGRTLDLSQPFQRLTIVGAIQKYAPAYT 340

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFY 443
            E +     ++   +     G      +     +  + +E        +E  +I+D+P  
Sbjct: 341 LEQLNDAAFLR---TELKKFGVEAFAHAGLGALQLALFEE--TAESQLWEPTYIIDYP-- 393

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
                                     + +D       +++L   G EIA+G    + +E 
Sbjct: 394 -------------------VEVSPLARASDTNPEITERFELFVTGREIANGFSELNDAED 434

Query: 504 MLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
               F     +KE  ++          RA + GMPP GG   GIDR+VMLL  + ++R+V
Sbjct: 435 QAARFHAQVAAKEAGDDEAMYYDADFIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDV 494

Query: 560 SLFPMSQ 566
            LFP  +
Sbjct: 495 ILFPHMR 501


>gi|294671198|ref|ZP_06736052.1| hypothetical protein NEIELOOT_02906 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307136|gb|EFE48379.1| hypothetical protein NEIELOOT_02906 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 503

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 69/297 (23%), Positives = 129/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++      V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQAVPVKIAGRMMLKRQMGKASFATIQDVTGQIQLYLNNKGVSQEVLDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    +S N         F R+   DAI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTAKISYNGKEVDLESPFERLTILDAIKKYNPHYTD 341



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAESKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F +    K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|332525509|ref|ZP_08401667.1| lysyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332108776|gb|EGJ10000.1| lysyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 492

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 64/290 (22%), Positives = 115/290 (39%), Gaps = 23/290 (7%)

Query: 7   HSCGDLGVSDVGS-----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           H   DL     G             V ++G +   R  G   F  ++D  G  Q+    D
Sbjct: 33  HHAADLHHQH-GQVPNEELEPKAVTVSVAGRMMLKRVMGKACFATLQDATGRIQLYVTQD 91

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +   E   + +   +  I G       E       TG++ + A  + +L+ +   PLP  
Sbjct: 92  AVGPETLAAFKRWDLGDILGC------EGTLFRTKTGELSIKATNVRLLTKSLR-PLPDK 144

Query: 116 GEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 +  +++ R++DL  D   +   V R++ ++S+R  M+   F+E  TP+L     
Sbjct: 145 FHGMTDQEQKYRQRYVDLMTDDAARSRFVARSKAVSSIRQYMVEHGFLEVETPMLHPIPG 204

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 205 GANAKPFVTHHNALDQEMF-LRIAPELYLKRLLVGGFERVFEINRNFRNEGI-SVRHNPE 262

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
           F  ++   ++    D+++  E VLR      +   T+S     +      
Sbjct: 263 FTMMEFYAAYWTHHDLMDFTEQVLRHAARAATGSATLSYAGREVDLAQPF 312



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 9/157 (5%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           + A  AR    + LG      +     + F  +E   E+K           P       +
Sbjct: 335 AAALHARL---KALGEEPPAHWTLA-ELQFGLFEAAVEDKLWQPT-FIIDYPVEVSPLAR 389

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----Y 526
            +D       +++L   G E A+G    + +E     F     +K+  +           
Sbjct: 390 ASDSNPSITERFELFITGREYANGFSELNDAEDQAARFQAQVANKDAGDEEAMYYDADFI 449

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + GMPP GG   GIDR++MLL  + ++R+V LFP
Sbjct: 450 RALEYGMPPAGGCGIGIDRLIMLLTDSPSIRDVILFP 486


>gi|329765180|ref|ZP_08256761.1| aspartyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138339|gb|EGG42594.1| aspartyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 436

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 81/297 (27%), Positives = 134/297 (45%), Gaps = 14/297 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H   +L  S  GS V + GWV  VR HG I F+ +RD  G   +VA       E+ + 
Sbjct: 11  RSHYSNELNSSMDGSEVTVMGWVLTVRGHGNISFVTLRDKNGDIPIVAKKGDCPDELREK 70

Query: 65  V---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREY 120
           +   ++   + + G V S           TG  E+    + + S  E+  P     +   
Sbjct: 71  LSALKAHSSIAVVGKVKSSE------KAPTG-FEIIPTDLRVFSDVEKIPPFEPLAKTVK 123

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R + R +DLRR TL      R+ ++ S+R     E F E +TP + A++ EG    
Sbjct: 124 NIDTRLEVRPIDLRRKTLQHIFNVRSEVLKSIRDYFYEEEFTEINTPKMIATATEGGAAL 183

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 N+ +F A  Q+PQ YK+ L  S F++ F+I P FR E  R++R   E   +D+E
Sbjct: 184 FAIFYYNKEAFLA--QSPQLYKEQLTMS-FEKVFEIGPIFRAEPSRTNRHLAEAISIDLE 240

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
            +FV+ +D++N +EN+++      ++    + +   I              DL   +
Sbjct: 241 EAFVDYNDVMNRIENIIKISLNSVNDYAKNNPDAEFIIPQIPKSIPRYSYDDLVEKM 297



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 27/155 (17%)

Query: 414 ADARNHIAQEL---GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           A A+     +L    +       F +I D+P                PF         +K
Sbjct: 300 AGAKTEWGDDLYPSNLKKIGVEGFYFIKDWPL------------GPKPFY--------VK 339

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            +      +  +DL+    E++SG  R      + +   N G+      + F     AF 
Sbjct: 340 DSKANPKISESFDLMFGDLELSSGSTRIEKRHELEERMKNKGMKT----DAFEYHLGAFD 395

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G+PPH G   G++R++M L G +N+R+V+ +P  
Sbjct: 396 YGVPPHAGCGIGLERLIMALTGTENIRDVTFYPRD 430


>gi|220909288|ref|YP_002484599.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|219865899|gb|ACL46238.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 467

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 146/380 (38%), Gaps = 63/380 (16%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF-EIAKSVRSE 68
           L   + G+ V++ GWV   R      FL++ D   +   QV+   D   + E+ K + + 
Sbjct: 12  LRQGEPGTRVKVKGWVRTKREQKEFTFLEVNDGSSLQSLQVILKRDLPNYTEVLKQLNTG 71

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G++++   +         +IEL A ++++   A+    P+  +R   E +R   
Sbjct: 72  ASVTVAGMLVASQGKN-------QRIELQADQVQVWGEADPETYPLQKKRHSLEFLR-TI 123

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +TL      R     ++        F+   TPI+TAS  EGA +    + ++ 
Sbjct: 124 GHLRSRTNTLGAVFRIRNACARAIHQFFQERGFLWVHTPIITASDCEGAGEMFAVTSLDL 183

Query: 189 --------------GSFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+  P       Q +  +MA  F   +   P FR E+  + R  
Sbjct: 184 SKVPLTPDQKVDYSQDFFGRPTYLTVSGQLEAEIMAMAFTNVYTFGPTFRAENSNTSRHL 243

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG-----------------------N 268
            EF+ ++ EM+F + +  ++  E  L+ +F+   +                        N
Sbjct: 244 AEFWMVEPEMAFCDLEGDMDLAEAFLKFIFQHVLDTCPEDLAFCNQWVDESKSVLATAEN 303

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEV 326
            +S+ F RI Y +AI            P+   +   +EH  +   ++F K + V    + 
Sbjct: 304 IISHQFERITYTEAIALLEKSNHPFEFPVQWGLDLQSEHERYLAEQLFKKPVIVTDYPKQ 363

Query: 327 WAIPAKGGGGNRAFCDRMNE 346
                      +AF  R+NE
Sbjct: 364 I----------KAFYMRLNE 373



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 48/138 (34%), Gaps = 24/138 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +   + D+P        K+I      F M           D  +++A    L     EI 
Sbjct: 353 KPVIVTDYP--------KQIKA----FYMR-------LNEDGKTVRAMDV-LAPKIGEII 392

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    EV+ Q  S  G+                + G  PH G   G +R+V  + G
Sbjct: 393 GGSQREERLEVLEQRISEQGLDLAPYW----WYLDLRRYGTVPHAGFGLGFERLVQFMTG 448

Query: 553 AKNVREVSLFPMSQNFCD 570
             N+R+V  FP +    D
Sbjct: 449 IGNIRDVIPFPRTPQNAD 466


>gi|212716371|ref|ZP_03324499.1| hypothetical protein BIFCAT_01290 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660624|gb|EEB21199.1| hypothetical protein BIFCAT_01290 [Bifidobacterium catenulatum DSM
           16992]
          Length = 558

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 108/575 (18%), Positives = 195/575 (33%), Gaps = 130/575 (22%)

Query: 6   THSCGDLGVSDVGS---------FVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANP 54
           T +  ++     G           V ++G V  +R  GG+ F+ +   D   I  +++  
Sbjct: 91  TATIEEVRAKYDGKLEAGDETEDVVGIAGRVLFLRNAGGLCFVQLSAGDGTKIQGMISKK 150

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           +      A S++    L   G  +      I +   TG++ + A +  I + A +    +
Sbjct: 151 EIG----ADSLKQFKQLVDLGDHLFIKGRVIASK--TGELSVFATEWAIAAKALQPLPAL 204

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
              ++  E  R +  ++ +  D   +N+V+ R++ + S+R      +F+E  TP+L T  
Sbjct: 205 --HKDLNEDTRTRKPYIGMIADEKIRNMVRNRSKAVASLRKTFADHDFLEVETPMLQTVH 262

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F           Y L  AP+ + +  +  G DR F+I   FR+E   +   P 
Sbjct: 263 GGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAP- 320

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  ++   ++   D I   ++ +++                     D A+  +GT K  
Sbjct: 321 EFTMVEAYQAYGNYDTIGALVKQLVQ---------------------DTAMDVFGTHK-- 357

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
               + + + TE+    E++  S   S++       +P  G        + +   A   G
Sbjct: 358 ----VTLLDGTEYDFGGEWKTISMYDSLSEALGEEIVPNGGPDNPGTSVEHLGAIADKLG 413

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
                       E  +V   G + +HL                                 
Sbjct: 414 -----------VERDDVENHGKLVEHLWEH------------------------------ 432

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                              FE  ++ DFP      E   +   H                
Sbjct: 433 -------------FYEDKLFEPTFVRDFPV-----ETSPLVKGHR--------------- 459

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRA 528
                   ++DL   GFE+A+G    +   V  + F          +            A
Sbjct: 460 -SKPGVVEKWDLYVRGFELATGYSELNDPVVQRERFVAQAKDALAGDEEACDIDEDFLEA 518

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              GMPP GG+  GIDR+++ L GA  +RE   FP
Sbjct: 519 LGVGMPPAGGMGMGIDRLLIALTGA-TIRETITFP 552


>gi|329118329|ref|ZP_08247038.1| lysine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465553|gb|EGF11829.1| lysine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 580

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 66/302 (21%), Positives = 124/302 (41%), Gaps = 22/302 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   S   L   ++   V+++G +   R  G   F  ++D  G  Q+  N        
Sbjct: 128 EKYDALSKEALDPQEI--PVKIAGRMMLKRAMGKASFATVQDVSGQIQLYINNQGVGEAA 185

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +   +  I G      AE        G++ +    I +LS +   PLP   +    
Sbjct: 186 HEDFKHWDMGDIVG------AEGTLFKTNHGELTVRVSNIRLLSKSLR-PLPDKHKGLAD 238

Query: 122 ESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           + ++++ R++DL          +KR++II ++R  M+ E ++E  TP++        A+ 
Sbjct: 239 QEVKYRQRYVDLIVSPESRDTFIKRSKIIQTVRNYMVGERYLEVETPMMHPIPGGASAKP 298

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  G +R F+I   FR+E   +   P EF  ++ 
Sbjct: 299 FVTHHNALDMPLY-LRIAPELYLKRLIVGGLERVFEINRSFRNEGMSTRHNP-EFTMMEF 356

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDK 290
             +F   + ++   E V+R   +       +S N         F R+   +AI++Y    
Sbjct: 357 YEAFCTYERMMQMTEGVIRACAQAVCGTAKISYNGKEVDLESPFERLTILEAIKKYNPHY 416

Query: 291 PD 292
            D
Sbjct: 417 TD 418



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 454 GCAEGKLWNPTFIIDYP---------------------VEVSPLARASDTKPGLTDRFEL 492

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E     F      K+  ++          RA + G+PP GG  
Sbjct: 493 FVVGRELANGYSELNDPEDQSARFKAQVAQKDAGDDEAMHYDADYIRAMEYGLPPTGGSG 552

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+DR+VMLL  A ++R+V LFP  +
Sbjct: 553 IGLDRLVMLLTDAPSIRDVILFPQMR 578


>gi|303230964|ref|ZP_07317707.1| lysine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514346|gb|EFL56345.1| lysine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 504

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 64/286 (22%), Positives = 125/286 (43%), Gaps = 20/286 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
                ++G +  +R HG   F +IRD  G  QV    D    +  K V+   +  I G+ 
Sbjct: 56  DQPTVIAGRLMTMRSHGKTAFANIRDLTGDIQVYFRKDVLGEDNYKYVKMLDIGDIVGI- 114

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                E       +G++ +   K+ +LS A   PLP          +R++ R++DL  + 
Sbjct: 115 -----EGHVFRTHSGEVTIKVNKLTLLSKALR-PLPEKWHGLKDTELRYRQRYVDLIVNP 168

Query: 138 LHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
             ++  +KR++I+  +R  M+ + F+E  TP++        AR F+          Y + 
Sbjct: 169 EVRDTFIKRSKIVAKIREYMMNDGFMEVETPMMHPIPGGAAARPFITHHNALDIDIY-MR 227

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G +R F++  CFR+E    +R   EF  ++   ++ + +D +   EN
Sbjct: 228 IAPELYLKRLIVGGMERVFEMNRCFRNEGID-NRHNPEFTTIESYQAYGDVEDAIRLTEN 286

Query: 256 VLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           ++    +E      ++           + RI   + +++Y  +  D
Sbjct: 287 LVSYCAQEVLGTQEITYQGTEINLTPPWNRITMAEGVKKYTGEDFD 332



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 11/112 (9%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++    G E+A+G    +      Q F +    +E  ++           A + G+P
Sbjct: 400 TERFEAFIYGRELANGFSELNDPIDQKQRFLDQLKEREAGDDEAHRMDEDFVNALEYGLP 459

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           P  G+  GIDR+VM L  + ++R+V LFP       L+    S V  E++ E
Sbjct: 460 PTAGLGVGIDRLVMFLTDSASIRDVLLFP-------LMKPETSQVQEEEITE 504


>gi|167855466|ref|ZP_02478230.1| lysyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853395|gb|EDS24645.1| lysyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 500

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 69/308 (22%), Positives = 133/308 (43%), Gaps = 28/308 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   ++     ++G +   R  G   F+ I+D  G  Q+    D+      ++      
Sbjct: 56  ELKAKEI--PAVVAGRIMLRRVMGKATFVTIQDVSGQIQLYVARDNLPEGEYENTVG--- 110

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L   G ++            TG++ + A ++++L+ A   PLP   +    +  R++ R+
Sbjct: 111 LLDLGDIIGVKGTLF--KTKTGELTVRAAELQLLTKALR-PLPNKHKGLTDQETRYRQRY 167

Query: 131 LDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           LDL   +   +  V R+++++ +R   + ++FIE  TP+L        A+ F+       
Sbjct: 168 LDLIANEESRRAFVIRSKVVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALD 227

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +  D
Sbjct: 228 VDMY-LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMIEYYQAYADYHD 285

Query: 249 ILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPIIM 299
           +++  E +LR +  +     TV            F RI   +AI +YG       N I M
Sbjct: 286 LMDNTEELLRKLALDILGTTTVPYGEYVFDFGKPFERITMHEAIVKYG-------NGISM 338

Query: 300 HNVTEHFV 307
            ++ +   
Sbjct: 339 DDLHDFDK 346



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 10/156 (6%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLL 475
             IA+ L I     +    I++   +E   E + I      F M      S     ND  
Sbjct: 348 VAIAKGLNIEIQKSWGLGSIVNA-IFEEVAEHQLIQPT---FLMAHPAEISPLARRNDEN 403

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQC 531
                +++L   G EI +G    + +E   + F     +KE  ++           A + 
Sbjct: 404 PEVTDRFELFIGGREIGNGFSELNDAEDQAERFQAQVAAKEAGDDEAMFYDDNFVVALEH 463

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+PP  G   GIDR+ M+   A ++R+V LFP  + 
Sbjct: 464 GLPPTAGEGLGIDRLAMIFANAPSIRDVILFPAMRQ 499


>gi|300864096|ref|ZP_07108995.1| asparaginyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300337912|emb|CBN54141.1| asparaginyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 463

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 75/384 (19%), Positives = 133/384 (34%), Gaps = 51/384 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSE 68
           L        V + GWV   R      F+++ D   +   QVV N +   +E I K + + 
Sbjct: 10  LRNGQPDENVTVQGWVRTKRELKEFTFVEVNDGSAMANLQVVINLNLPNYEHIVKQLNTG 69

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G++++  A+         +IEL A  + +   A+    P+  +R   E +R   
Sbjct: 70  ASVEVTGVLVASPAKG-------QRIELKASAVTVYGDADPQTYPLQKKRHSFEFLR-TI 121

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +T       R    +++        F+   TPI+TAS  EGA +    +  + 
Sbjct: 122 AHLRSRTNTYSAVFRVRNACAHAVHQFFQERGFLWVHTPIITASDCEGAGEMFSVTNFDL 181

Query: 189 G--------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q +  +MA  F   +   P FR E+  + R  
Sbjct: 182 KNIPRNDREQIDFTKDFFGKPAYLTVSGQLEAEVMAMAFGNVYTFGPTFRAENSNTSRHL 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS-------------------- 271
            EF+ ++ EM+F + +  ++  E  L+ +F+                             
Sbjct: 242 AEFWMIEPEMAFCDLEGDMDLAEAFLKHIFKYVLETCQEDIEFFNERIDKTVLATAENII 301

Query: 272 -NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            N F RI Y +A+R           P+   +   +EH  +    +F K   V        
Sbjct: 302 NNQFERITYTEAVRLLEQADKQFEFPVKWGLDLQSEHERYLAEELFKKPTIVTDYPVEIK 361

Query: 329 IPAKGGGGNRAFCDRMNEWARSQG 352
                   +      M+  A   G
Sbjct: 362 AFYMRLSDDEKTVRAMDVLAPKIG 385



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 48/130 (36%), Gaps = 14/130 (10%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
            ++              F M     E +++  D+L+ K           EI  G  R   
Sbjct: 346 LFKKPTIVTDYPVEIKAFYMRLSDDEKTVRAMDVLAPKIG---------EIIGGSQREER 396

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            +V+ +     G++KE +           + G  PH G   G +R+V  + G  N+R+V 
Sbjct: 397 LDVLERRIEAQGMNKEDLW----WYLDLRRYGTVPHAGFGLGFERVVQFMTGMGNIRDVI 452

Query: 561 LFPMSQNFCD 570
            FP +    D
Sbjct: 453 PFPRAPLTID 462


>gi|260880904|ref|ZP_05403101.2| lysine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260849879|gb|EEX69886.1| lysine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 506

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 70/342 (20%), Positives = 137/342 (40%), Gaps = 27/342 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L   + G  VR++G +  +R HG   F  + D  G  QV    D    +  K   +++  
Sbjct: 61  LEGDEEGGEVRIAGRLMAIRGHGKASFCTLNDRTGNIQVYFKIDVLGEDKYK---NQFKK 117

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++      I      G++ +  +  ++LS +   PLP          IR++ R+L
Sbjct: 118 LDIGDIVGIRG--IVFKTHRGEVTVRVEDFDLLSKSLR-PLPEKFHGLQDVDIRYRQRYL 174

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQG 189
           DL  +   +   + RT+II S+R  +   +++E  TP+L T +    AR F+        
Sbjct: 175 DLIMNPEVRETFRKRTKIIQSIRSYLDTRDYLEVETPVLSTIAGGAAARPFVTHHNALDI 234

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A +   + L+  GFDR +++   FR+E       P EF  ++   ++ +  D+
Sbjct: 235 DLY-LRIATELNLKRLVIGGFDRVYEMGRVFRNEGMDVRHNP-EFTTIEFYQAYADYTDM 292

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++  E ++    +       ++   + I                   I M++  +     
Sbjct: 293 MDITEGIVVNAAKSVLGTPVINYQGVEIDLSKV------------KRISMNDAVKEATGK 340

Query: 310 EFRVFSKILSVNPGYEVWAIPAK-----GGGGNRAFCDRMNE 346
           +F     +       +   +P +     GG  N+AF +++ E
Sbjct: 341 DFLSCETVEEARKMADEIGVPYEQRHGIGGILNQAFEEKVEE 382



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/176 (23%), Positives = 68/176 (38%), Gaps = 7/176 (3%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
             D+     G     C    +AR  +A E+G+          I++  F E  EE   +  
Sbjct: 330 MNDAVKEATGKDFLSCETVEEAR-KMADEIGVPYEQRHGIGGILNQAFEEKVEET--LMQ 386

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
                  P       K N        +++    G E+A+G    +        F +    
Sbjct: 387 PTFITGHPTEISPLAKRNPEDPRITDRFEFFIYGRELANGFTELNDPIDQEGRFLDQLKQ 446

Query: 515 KEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +E  ++           A + G+PP GG+  GIDR+VMLL  A ++R+V LFP  +
Sbjct: 447 REAGDDEAHVMDRDYITAMEYGLPPTGGVGIGIDRLVMLLTDAPSIRDVLLFPTMK 502


>gi|113461151|ref|YP_719219.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|112823194|gb|ABI25283.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 496

 Score =  201 bits (511), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 76/364 (20%), Positives = 140/364 (38%), Gaps = 40/364 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R+H   +L      +           V ++G +   R  G I F+ ++D     Q+  + 
Sbjct: 34  RSHYAVELHNKYDQTTKIELEMLKVNVAVTGRIMTKRFMGKIAFITLKDGDSSIQLYISQ 93

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D       +  +   +  I G+      E       T ++ ++ +K  +L+ A   PLP 
Sbjct: 94  DIVSNAEFEKFKKWDIGDIVGV------EGAVFKTNTDELSINTKKARLLTKALR-PLPD 146

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R++DL  +    N  K R++I+  +R  M++  F+E  TP++    
Sbjct: 147 KFHGLSDQEMRYRQRYVDLIVNEKSYNTFKLRSKILAEIRNYMVSNGFMEVETPMMQVIP 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  +P+ + + L+  GFDR F+I   FR+E   S R   
Sbjct: 207 GGASARPFITHHNALNSDLY-LRISPELFLKRLIVGGFDRVFEINRNFRNEGI-SPRHNP 264

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++ M+  +  D++   EN+ R V                      I +YG  + D
Sbjct: 265 EFTMMELYMAHADYRDLIKLTENLFRTVAINTLG--------------SPIVKYGNIEFD 310

Query: 293 LRNPIIMHNVTEHFVHSEF-----RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
              P +   + E  +H         + S   +V    ++     K  G  R   +   E 
Sbjct: 311 FSKPFVQMTMREAIIHYGNDIQLDDIMSYESAVKIAQKLGIQVEKSWGLGRLQSEIFEEV 370

Query: 348 ARSQ 351
           A   
Sbjct: 371 AEKH 374



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 63/152 (41%), Gaps = 10/152 (6%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEE--EKKIDFAHNPFTMPQGGMESLKGNDLL 475
             IAQ+LGI         W +     E  EE  EK +         P       + ND+ 
Sbjct: 343 VKIAQKLGIQVEKS----WGLGRLQSEIFEEVAEKHLIQPTFITEYPAEISPLARRNDID 398

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQC 531
                +++      EI +G    + +E   + F +   +KE  ++           A + 
Sbjct: 399 PEYTDRFEFFIGAREIGNGFSELNDAEDQAERFRDQVKAKEAGDDEAMFYDDDYVIALEY 458

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP  G+  GIDR+VMLL  +  +R+V LFP
Sbjct: 459 GMPPTAGLGIGIDRMVMLLTDSHTIRDVILFP 490


>gi|296333026|ref|ZP_06875483.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305674870|ref|YP_003866542.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296149877|gb|EFG90769.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305413114|gb|ADM38233.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 430

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 86/321 (26%), Positives = 131/321 (40%), Gaps = 34/321 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVL 71
             VG  V +  WV   R  G I FL +RD  G  Q   V A  + + F+ AKSV  E  L
Sbjct: 10  KHVGEEVMIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEESIFQTAKSVTQETSL 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G+V       +         EL+   IE++  A + P+     +E+       +R L
Sbjct: 70  YIKGIVKEDERSPL-------GYELAVTGIEVIHEATDYPITP---KEHGTEFLMDHRHL 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR    H  +  R  II +       E F++   PILT S+PEG  +       ++ ++
Sbjct: 120 WLRSKRQHAIMKIRNEIIRATYEFFNNEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY 179

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L 
Sbjct: 180 --LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFEENLQ 236

Query: 252 TMENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRY---GTDKPDL 293
             EN +  + +       +  N               F RI YD+AI      G D  + 
Sbjct: 237 VQENYVSFIVQSVLKNCKIELNTLGRDTSKLEQIKAPFPRITYDEAIDFLKEKGFDDIEW 296

Query: 294 RNPIIMHNVTEHFVHSEFRVF 314
            +     + T    H +  VF
Sbjct: 297 GDDFGAPHETAIAEHYDKPVF 317



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 19/128 (14%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           D P +       +   +  PF M         +   DL++ + +         EI  G  
Sbjct: 313 DKPVF-----ITRYPTSLKPFYMQPASDRDDVVLCADLIAPEGYG--------EIIGGSE 359

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  E++       G+      + +       + G  PH G   G++R V  + GA +V
Sbjct: 360 RIHDMELLEARLKEHGLD----SDAYKWYAELRKYGSVPHSGFGLGLERTVAWISGAPHV 415

Query: 557 REVSLFPM 564
           RE   FP 
Sbjct: 416 RETIPFPR 423


>gi|291516409|emb|CBK70025.1| Lysyl-tRNA synthetase (class II) [Bifidobacterium longum subsp.
           longum F8]
          Length = 560

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 105/563 (18%), Positives = 193/563 (34%), Gaps = 125/563 (22%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANPDSACFEIAKSVR 66
            G+     VG    ++G V  +R  GG+ F+ +   D   I  +++  +      A S++
Sbjct: 108 AGEETEDMVG----IAGRVLFLRNAGGLCFVQLSAGDGTKIQGMISKKEIG----ADSLK 159

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G  +      I +   TG++ + A +  I S A +    +   ++  E  R 
Sbjct: 160 QFKQLVDLGDHLYLKGRVIASK--TGELSVFATEWAIASKALQPLPAL--HKDLNEDTRT 215

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           +  ++ +  D   +N+V+ R++ + S+R      +F+E  TP+L        AR F    
Sbjct: 216 RKPYIGMIADENIRNMVRNRSKAVASLRRTFDDHDFLEVETPMLQTLHGGAAARPFTTHM 275

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ + +  +  G DR F+I   FR+E   +   P EF  ++   ++ 
Sbjct: 276 NAFDLDLY-LRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAP-EFTMVEAYQAYG 333

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             D I   ++ +++                       A+  YG+ K      + + + TE
Sbjct: 334 TYDSIGQLVKELVQK---------------------TAMDVYGSHK------VTLLDGTE 366

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
           +    E++  S   S++       +P  G                               
Sbjct: 367 YDFGGEWKTISMYDSLSEALGEEIVPNGG------------------------------- 395

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
                    P     ++ +  AI  +L ++  D                     H+ +  
Sbjct: 396 ---------PEHPGTSVEHLAAIADKLGVERDD------------VENHGKLVEHLWEHF 434

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                  +E  ++ DFP      E   +   H                        ++DL
Sbjct: 435 --YEDKLYEPTFVRDFPV-----ETSPLVKGHR----------------TKPGVVEKWDL 471

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIA 540
              GFE+A+G    +   V  + F          +            A   GMPP GG+ 
Sbjct: 472 YVRGFELATGYSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMG 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            GIDR+++ L GA  +RE   FP
Sbjct: 532 MGIDRLLIALTGA-TIRETITFP 553


>gi|261406095|ref|YP_003242336.1| asparaginyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261282558|gb|ACX64529.1| asparaginyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 431

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 75/320 (23%), Positives = 123/320 (38%), Gaps = 33/320 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVL 71
             VG  V +  W++  R  G I FL +RD  G  Q   V +      +E AKS+  E  L
Sbjct: 12  QHVGETVTIGAWINNKRSSGKIQFLQLRDGSGYIQGVVVKSEVSEQVWEDAKSLTQESSL 71

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G++                 E++   IEI+ + E  P+     +E+       +R L
Sbjct: 72  YVTGVIREEPRSQS-------GYEMTVTGIEIIHLTENYPITP---KEHGVDYLMDHRHL 121

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR       +V R  II +++       F     PILT +S EG  +       ++ ++
Sbjct: 122 WLRTQKQRAIMVIRAEIIRAVQEYFDTNGFTLVDPPILTPTSAEGTTNLFHTKYFDEDAY 181

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ EM+F + ++ L 
Sbjct: 182 --LTQSGQLYMEAA-AMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTDHEESLQ 238

Query: 252 TMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
             E  +  V +               + S    +   F RI YD+AI    T   D+   
Sbjct: 239 VQEQFISHVVQSVVKNCRQELETIGRDISKLEAIQAPFPRITYDEAIEFLHTQDFDIPWG 298

Query: 297 IIMHNVTE--HFVHSEFRVF 314
                  E       +  VF
Sbjct: 299 EDFGAPHETAIAEKYDKPVF 318



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 46/138 (33%), Gaps = 7/138 (5%)

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL-SIKAFQYDLVCN-- 487
            F+  W  DF         +K D        P G        D          D++    
Sbjct: 292 DFDIPWGEDFGAPHETAIAEKYDKPVFITHYPAGIKAFYMKPDPNCPEVVLCADMIAPEG 351

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             EI  G  R    +++ + F    +S E  +          + G  PH G   G++R V
Sbjct: 352 YGEIIGGSQRIDDPQLLEERFKEHDLSMETYQ----WYMDLRKYGTVPHSGFGLGLERTV 407

Query: 548 MLLLGAKNVREVSLFPMS 565
             + G  +VRE   FP +
Sbjct: 408 AWICGLDHVRETIPFPRT 425


>gi|218768429|ref|YP_002342941.1| lysyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|32130176|sp|Q9JTT7|SYK_NEIMA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|121052437|emb|CAM08773.1| lysyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|319410675|emb|CBY91052.1| lysyl-tRNA synthetase (lysine-tRNA ligase; LysRS) [Neisseria
           meningitidis WUE 2594]
          Length = 503

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    ++ N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASHTVNGTANITYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F      K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|308069459|ref|YP_003871064.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase)
           [Paenibacillus polymyxa E681]
 gi|305858738|gb|ADM70526.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase)
           [Paenibacillus polymyxa E681]
          Length = 431

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 74/299 (24%), Positives = 120/299 (40%), Gaps = 31/299 (10%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLC 72
            VG  V +  WV+  R  G I FL +RD  G  Q V        +I   AKS+  E  L 
Sbjct: 13  HVGETVTIGAWVNNKRSSGKIQFLQLRDGSGYIQGVIVKSEVSEDIWNDAKSLTQESSLY 72

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G+V                 EL+   IEI+ + E  P+     +E+       +R L 
Sbjct: 73  VTGVVREEPRSQS-------GFELTVTGIEIIHLTENYPITP---KEHGVDFLMDHRHLW 122

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       ++ R  II +++       F +   PILT SS EG  +       ++ ++ 
Sbjct: 123 LRSAKQRAVLIVRAEIIRAVQEFFNGNGFTKVDPPILTPSSAEGTTELFHIKYFDEDAY- 181

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ EM+FV+ ++ L  
Sbjct: 182 -LTQSGQLYMEAA-AMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVDHEESLRV 239

Query: 253 MENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
            E  +  + +               + S    +   F RI YD+AI     +  D+   
Sbjct: 240 QEQFVSHIVQSVLKNCAKELETIGRDVSKLEQIQGEFPRITYDEAIAFLQGEGFDIPWG 298



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 38/134 (28%), Gaps = 24/134 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAH-NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
           +  +I  +P              H   F M               I    Y       EI
Sbjct: 315 KPVFITHWP-------------THIKAFYMKPDPTRPEVVLCADMIAPEGY------GEI 355

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R     +M + F+   +        +         G  PH G   G++R V  + 
Sbjct: 356 IGGSQRIDDPALMEERFNEHNL----AREAYQWYMDLRTYGTVPHSGFGLGLERTVAWIC 411

Query: 552 GAKNVREVSLFPMS 565
           G  +VRE   FP  
Sbjct: 412 GLDHVRETIPFPRM 425


>gi|116511230|ref|YP_808446.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|122940346|sp|Q031U8|SYK_LACLS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116106884|gb|ABJ72024.1| Lysyl-tRNA synthetase (class II) [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 494

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 73/351 (20%), Positives = 141/351 (40%), Gaps = 33/351 (9%)

Query: 2   HRY-RTHSCGDLGVSDVGSFV----------RLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           H++ RTH+  +L  +                 ++G +   R  G + F  ++D  G  Q+
Sbjct: 31  HKFTRTHNSQELHEAYDEKTKEELHELALSGIVAGRLMTKRGKGKVGFAHLQDREGQIQL 90

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    E  +  +   +    G  +    E +  ++  G++ + A+K+  LS A   
Sbjct: 91  YVRKDEVGEENYEIFKKADL----GDFLGVEGEIMKTDM--GELSIKAKKLTFLSKALR- 143

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           R++ R+LDL  +       V R++II+ +R  M    ++E  TP+L
Sbjct: 144 PLPEKFHGLTDTETRYRKRYLDLISNKESFNRFVTRSKIISEIRRYMDGRGYLEVETPVL 203

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F            AL  A + + + L+  G ++ +++   FR+E     
Sbjct: 204 NNEAGGASARPFYTHHNSLDIDM-ALRIATELHLKRLIVGGMEKVYELGRVFRNEGMDMT 262

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICY 279
             P EF  ++   ++ + +DI++  E + + V +     + +  +         F R+  
Sbjct: 263 HNP-EFTTMESYEAYADFEDIMDLTEGIFQHVAKTVVGQDVLEYDGKEINVGGKFKRVHM 321

Query: 280 DDAIRR-YGTD-KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            DAI+   G D  P++          EH +H E    S    +N  +E + 
Sbjct: 322 VDAIKEVAGVDFWPEMTFEEATALAKEHDIHVEKHFTSVGHIINEFFEKYV 372



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  I      F  P+      K N+       +++L  NG E A+     +  
Sbjct: 367 FFEKYVEETLIQPTFV-FGHPKEISPLAKMNEKDPRFTDRFELFINGKEYANAFSELNDP 425

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
              L+ F     +KE+ ++   G       A + GMPP GG+  GIDR+VML  G  ++R
Sbjct: 426 IDQLERFEAQAKAKELGDDEATGVDYDYVEALEHGMPPTGGLGIGIDRLVMLFTGTTSIR 485

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 486 DVLLFPTMK 494


>gi|70606564|ref|YP_255434.1| aspartyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|68567212|gb|AAY80141.1| aspartyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 428

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 86/308 (27%), Positives = 144/308 (46%), Gaps = 23/308 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           + +   ++     G  V L+GWVH +R  GG  FL +RD  GI Q+V +  S  F+    
Sbjct: 2   KDYYIKNVTQDLDGKEVTLAGWVHNIRDLGGKKFLLLRDKTGIGQIVVDKSSPSFQEISD 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPES 123
           +  E V+ + G+V +        N     +E+ A++++ILS A+  LPL V G+ +    
Sbjct: 62  ISQESVIMVKGVVKAD-------NRAPNGVEVHAKEVKILSKAKSPLPLDVSGKVKADID 114

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R K R LDLRR  +   +  +   + S R  +  E F+E  TP + AS+ EG       
Sbjct: 115 TRLKERVLDLRRQEMQSILKIQNITLKSFRETLYKEGFVEVFTPKIIASATEGGAQLFSV 174

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + +F A  Q+PQ YK+ L+A   ++ F+IAP +R ED  +     EF  +D+EM+F
Sbjct: 175 IYFGETAFLA--QSPQLYKE-LLAGVVEKVFEIAPAWRAEDSDTPYHLAEFISMDVEMAF 231

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------RICYDDAIRRYGTDKP 291
              +D +  +E ++  +     N  +     L            R+ Y DAI    +   
Sbjct: 232 GNYEDAMKLLEKLIYNIVNSVKNEASDELKILSHNLPDVKIPIKRLTYKDAIEILQSKGY 291

Query: 292 DLRNPIIM 299
           +++    +
Sbjct: 292 NIKFGDDI 299



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/143 (27%), Positives = 56/143 (39%), Gaps = 24/143 (16%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           + N    +  +I D+P                PF          K  D     +  +DL+
Sbjct: 307 LYNELKEDLYFITDWPTLS------------RPFYTKS------KDTDPN--VSESFDLI 346

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
               EIASG  RNH  EV+  +    G+        F    R F  GMPPH G   G  R
Sbjct: 347 YRWLEIASGSTRNHKREVLEDSLRKRGLKP----ENFEFFLRWFDYGMPPHTGFGMGFAR 402

Query: 546 IVMLLLGAKNVREVSLFPMSQNF 568
           ++++L G  NV+E+  FP  +  
Sbjct: 403 LLVMLTGIHNVKEIVPFPRDKKR 425


>gi|113867187|ref|YP_725676.1| lysyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|123134219|sp|Q0KCG3|SYK_RALEH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|113525963|emb|CAJ92308.1| Lysyl-tRNA synthetase (class II) [Ralstonia eutropha H16]
          Length = 514

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 65/336 (19%), Positives = 129/336 (38%), Gaps = 33/336 (9%)

Query: 6   THSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH    L      +           V ++G +   R  G   F  ++D  G  Q     D
Sbjct: 49  THQAAALQAQYTETEQATLEAAPVEVAIAGRMMLKRVMGKASFATVQDGSGQIQFYITRD 108

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E+  + +   +    G ++S   E    N   G++ +  +++ +LS +   PLP  
Sbjct: 109 KVGEEVYAAFKHWDL----GDIISARGELFRTN--KGELSVQVRELRLLSKSLR-PLPDK 161

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + ++++ R++DL            RT  I+S+R  M    F+E  TP+L     
Sbjct: 162 FHGLADQEMKYRQRYVDLIVSPETRNTFRARTNAISSLRRHMADAGFMEVETPMLHPIPG 221

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + +  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 222 GAAAKPFITHHNALDMQMF-MRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPE 279

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIR 284
           F  ++   ++ +   +++  E+++R    +               +S  F R+    AI+
Sbjct: 280 FTMMEFYAAYTDYRWLMDFTEDLIRKAAIDARGSAVLTYQDRELDLSKPFHRLTICQAIQ 339

Query: 285 RYGTDKPDLR---NPIIMHNVTEHFVHSEFRVFSKI 317
           ++     D +      +   + +  V++    F   
Sbjct: 340 KFAPQYTDAQLADAGFLRTELKKFGVNTNAPQFLNA 375



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 53/305 (17%), Positives = 100/305 (32%), Gaps = 39/305 (12%)

Query: 275 LRICYDDA--IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
             I + +A  ++ +    P+L    ++    E          ++ +S     E   +   
Sbjct: 227 PFITHHNALDMQMFMRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFY 286

Query: 333 GGG-GNRAFCDRMNEWARSQG--QPGLAYIFWRLDESGNVAGMG------PVAKHLNIVN 383
                 R   D   +  R       G A + ++  E               + K      
Sbjct: 287 AAYTDYRWLMDFTEDLIRKAAIDARGSAVLTYQDRELDLSKPFHRLTICQAIQKFAPQYT 346

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSF-AADARNHIAQELGIINCNCFEFCWIMDFPF 442
              +     ++     F +  +  +F +      +  + +E        +E  +I+D+P 
Sbjct: 347 DAQLADAGFLRTELKKFGVNTNAPQFLNAGLGTLQLVLFEE--TAENQLWEPTFIVDYP- 403

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
                                      + +D +     +++L   G EIA+G    + +E
Sbjct: 404 --------------------VEVSPLARASDTVPGITERFELFITGREIANGFSELNDAE 443

Query: 503 VMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
                F      K+  +           RA + GMPP GG   GIDR+VMLL  + N+R+
Sbjct: 444 DQADRFRKQVEQKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRD 503

Query: 559 VSLFP 563
           V LFP
Sbjct: 504 VILFP 508


>gi|15837714|ref|NP_298402.1| lysyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|11387145|sp|Q9PEB6|SYK_XYLFA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|9106069|gb|AAF83922.1|AE003947_2 lysyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 506

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 62/303 (20%), Positives = 122/303 (40%), Gaps = 24/303 (7%)

Query: 4   YRTHSCGDL-------------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
            R H   D+              +   G  VR++G +   R  G   F  I+D  G  Q+
Sbjct: 40  KREHYAADVQVAFANVETWTAEALEASGDRVRMAGRLMAKRLMGKASFAQIQDESGRIQL 99

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
           +   +    +   + +   V    G +++           TG++ +    + +L+ A   
Sbjct: 100 LIQSNVLGEDSYAAFKVLDV----GDIIAVEGGL--TRTRTGELSVKVNVLRLLTKALR- 152

Query: 111 PLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           R++ R++DL       +  +KR++II ++R  + A  F+E  TP++
Sbjct: 153 PLPDKWHGLTDVEQRYRQRYVDLIVTPESREIFIKRSKIIRALRTWLDARLFLEVETPMM 212

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   A+ F+          Y L  AP+ Y + L+  G +R ++I   FR+E   + 
Sbjct: 213 HYIPGGAAAKPFVTYHNALDLELY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTR 271

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  L++  ++    ++++  E ++R   +       V  +  +I      RR+  
Sbjct: 272 HNP-EFTMLELYEAYSTYHEVMDLAETMIRDTAQSVLGTTQVIWDGAQIDLGPIFRRWRM 330

Query: 289 DKP 291
           D+ 
Sbjct: 331 DEA 333



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
           + +D+      +++L  NG EIA+G    +  E     F     +KE  ++         
Sbjct: 403 RESDIEPGYTDRFELFINGKEIANGFSELNDPEEQAMRFQKQVEAKEGGDDEAMYYDADY 462

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  G+DR+VMLL G+ ++R+V LFP
Sbjct: 463 IRALEYGMAPTGGLGIGVDRLVMLLTGSTSIRDVLLFP 500


>gi|319779399|ref|YP_004130312.1| Lysyl-tRNA synthetase (class II) [Taylorella equigenitalis MCE9]
 gi|317109423|gb|ADU92169.1| Lysyl-tRNA synthetase (class II) [Taylorella equigenitalis MCE9]
          Length = 513

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 62/297 (20%), Positives = 119/297 (40%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDVGSFVR---LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            ++   ++        ++G +   R  G   F  ++D  G  QV  +      E     +
Sbjct: 63  DEISKEELDPLETPAIVAGRMMLKRVMGKASFATLQDSTGRIQVYLDKKHLGDEAYDDFK 122

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           S  +  I G+             + G++ + AQ IE++S +   PLP        + +R+
Sbjct: 123 SWDIGDIVGV------SGRVFKTMKGELSVHAQSIELISKSLR-PLPDKFHGLSDQELRY 175

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +   + R++ +  +R  M    F+E  TP+L        A+ F+   
Sbjct: 176 RQRYVDLIMNESTRETFRIRSQAMTHLRQIMSEHGFLEVETPMLHPIPGGATAKPFVTHH 235

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++   ++ 
Sbjct: 236 NALDMDMY-LRVAPELYLKRLVVGGFDRVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYT 293

Query: 245 EQDDILNTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRRYGTDKPD 292
           + + +++  E +LR +                      F R+   +AI +Y     +
Sbjct: 294 DYEWMMDFTEKLLREIAVRTLGSAQFFHQGRALSFEEPFERLTMVEAILKYCDKYTE 350



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 27/155 (17%)

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  + +E   +    +   +I+D+P  E +   +  D  H+               
Sbjct: 376 LGALQLALFEE--TVESLLWNPTFIVDYPV-EVSPLARASDANHD--------------- 417

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRA 528
                   +++L   G EIA+G    +  E     F     +K+  +           RA
Sbjct: 418 -----ITERFELFITGREIANGFSELNDPEDQSARFMEQVKAKDAGDEEAMYYDSDYIRA 472

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            + GMP  GG   GIDR++MLL  +  +R+V LFP
Sbjct: 473 LEYGMPYAGGCGIGIDRLMMLLTDSSTIRDVLLFP 507


>gi|94676799|ref|YP_588620.1| lysyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|123384151|sp|Q1LTU4|SYK_BAUCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|94219949|gb|ABF14108.1| lysyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 506

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 74/335 (22%), Positives = 136/335 (40%), Gaps = 24/335 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            +  +   V L+G +   R  G   F+ ++D  G  Q+  +  +           +W L 
Sbjct: 61  TLKTLNIQVSLAGRMINRRIMGKASFVILQDSGGTIQLYLSSKNLSDSFYNEHFKKWDL- 119

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G ++            TG++ ++  +I +L+ A   P+P        + IR++ R+LD
Sbjct: 120 --GDILGVHGRLF--KTKTGELTINCNEIILLTKALR-PIPNKFHGIVDKQIRYRQRYLD 174

Query: 133 LRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +    N+ K R++II  +R  +  E+FIE  TPIL +      AR F+        +
Sbjct: 175 LITNKNSFNLFKTRSQIITEIRQFLNKEDFIEVETPILQSLPGGATARPFITYHNALDMN 234

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  +++ +++ +  D++
Sbjct: 235 LY-LRIAPELYLKQLIIGGFEKIFEINRNFRNEGLSAHHNP-EFTMMELYIAYADYHDVM 292

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
              +N+L  +       N              I +YG  K D     +   + E   H  
Sbjct: 293 LLTQNLLNTITNHVLGTN--------------IIQYGNLKLDFSKNFVKMTMKEAICHYN 338

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
            ++ SK L         A         +    R+ 
Sbjct: 339 KQILSKHLDDKMQAITCAKNIGIHIDQKWGLGRIQ 373



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 5/128 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E K +       + P       + ND     A +++L   G+EI +G    +  E
Sbjct: 377 FEKTTE-KHLLQPTFITSYPIEVSPLARRNDNNPFFADRFELFIGGYEIGNGFSELNDYE 435

Query: 503 VMLQAFSNVGISKEVVENRFGGLYR----AFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
                       K   +N           A + G+PP  G+  GIDR+VMLL  +  +R+
Sbjct: 436 DQANRLIEQATIKNSGDNESMFYDEDYIIALEHGLPPTAGLGIGIDRLVMLLTNSHFIRD 495

Query: 559 VSLFPMSQ 566
           V LFP  +
Sbjct: 496 VILFPTMR 503


>gi|167465842|ref|ZP_02330931.1| lysyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 432

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 55/260 (21%), Positives = 115/260 (44%), Gaps = 11/260 (4%)

Query: 27  VHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETIN 86
           + + R  G   F  ++D  G  Q+    D+   +  K+     +  I G+      +   
Sbjct: 1   MMQKRGMGKASFAHVQDISGQIQIYVRLDAVGEDKYKAFEMLDLGDIIGV------KGTV 54

Query: 87  ANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKR 145
               TG+  +  + +E+L+ +  +PLP          +R++ R++DL  +  + K  + R
Sbjct: 55  FKTKTGETSIKVKDLEVLTKSL-IPLPDKFHGLQDVELRYRQRYVDLIMNQDVQKTFILR 113

Query: 146 TRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           ++II SMRC + +  F+E  TP L A +    AR F+          Y +  A + + + 
Sbjct: 114 SKIIQSMRCYLDSLGFLEVETPTLHAIAGGASARPFITHHNALDMQLY-MRIAIELHLKR 172

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           L+  G ++ ++I   +R+E   +   P EF  +++  ++ +  DI+   E+++  + +E 
Sbjct: 173 LIVGGLEKVYEIGRVYRNEGVSTRHNP-EFTMIELYEAYADYKDIMQLTEDLISHIAKEV 231

Query: 265 SNGNTVSNNFLRICYDDAIR 284
               T+      +    A R
Sbjct: 232 LGSTTIEYQGKEVNLAGAWR 251



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 12/159 (7%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDL 474
           + +A+E  +       F  I++  F+E   EE  I       +P  +    +      D 
Sbjct: 277 HRLAKEHNVPVEPNMTFGHIVN-QFFETFVEETLIQPTFVYGHPVAISP--LAKKNEEDP 333

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++L     E A+     +      + F      +E   +          RA +
Sbjct: 334 R--FTDRFELFIVAREHANAFTELNDPIDQRERFEAQLREREQGNDEAHMMDEDFIRALE 391

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G+PP GG+  G+DR++MLL  A ++R+V LFP  +   
Sbjct: 392 YGLPPTGGLGIGVDRLIMLLTNAPSIRDVLLFPTMRERQ 430


>gi|261378958|ref|ZP_05983531.1| lysine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269144660|gb|EEZ71078.1| lysine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 503

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 71/315 (22%), Positives = 131/315 (41%), Gaps = 23/315 (7%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           GD+   ++      V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GDISKEELDPQAVPVKIAGRMMLKRQMGKASFATIQDVTGQIQLYLNNKGVSQEVLDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPDLRN 295
           + + ++   E+++R      +    +S N         F R+    AI++Y     D + 
Sbjct: 285 DYERMMQMAEDIIRNASRAVNGTAKISYNGKEVDLESPFERLTILGAIKKYNPHYTDEQL 344

Query: 296 PIIMHNVTEHFVHSE 310
                   E   H E
Sbjct: 345 NDEEWLKKEIVKHGE 359



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F      K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|125623258|ref|YP_001031741.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|166229809|sp|A2RIA0|SYK_LACLM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|124492066|emb|CAL96994.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070008|gb|ADJ59408.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 494

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 73/351 (20%), Positives = 141/351 (40%), Gaps = 33/351 (9%)

Query: 2   HRY-RTHSCGDLGVSDVGSFV----------RLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           H++ RTH+  +L  +                 ++G +   R  G + F  ++D  G  Q+
Sbjct: 31  HKFTRTHNSQELHEAYDEKTKEELHELALSGIVAGRLMTKRGKGKVGFAHLQDREGQIQL 90

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    E  +  +   +    G  +    E +  ++  G++ + A+K+  LS A   
Sbjct: 91  YVRKDEVGEENYEIFKKADL----GDFLGVEGEIMKTDM--GELSIKAKKLTFLSKALR- 143

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           R++ R+LDL  +       V R++II+ +R  M    ++E  TP+L
Sbjct: 144 PLPEKFHGLTDTETRYRKRYLDLISNKESFNRFVTRSKIISEIRRYMDGRGYLEVETPVL 203

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F            AL  A + + + L+  G ++ +++   FR+E     
Sbjct: 204 NNEAGGASARPFYTHHNSLDIDM-ALRIATELHLKRLIVGGMEKVYELGRVFRNEGMDMT 262

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICY 279
             P EF  ++   ++ + +DI++  E + + V +     + +  +         F R+  
Sbjct: 263 HNP-EFTTMESYEAYADFEDIMDLTEGIFQHVAKTVVGQDVLEYDGKEINVGGKFKRVHM 321

Query: 280 DDAIRR-YGTD-KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            DAI+   G D  P++          EH +H E    S    +N  +E + 
Sbjct: 322 VDAIKEVAGVDFWPEMTFEEATALAKEHDIHVEKHFTSVGHIINEFFEKYV 372



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  I      F  P+      K N+       +++L  NG E A+     +  
Sbjct: 367 FFEKYVEETLIQPTFV-FGHPKEISPLAKMNEKDPRFTDRFELFINGKEYANAFSELNDP 425

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
              L+ F     +KE+ ++   G       A + GMPP GG+  GIDR+VML  G  ++R
Sbjct: 426 IDQLERFEAQAKAKELGDDEATGVDYDYVEALEHGMPPTGGLGIGIDRLVMLFTGTTSIR 485

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 486 DVLLFPTMK 494


>gi|161870293|ref|YP_001599463.1| lysyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161595846|gb|ABX73506.1| lysyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 491

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 42  GEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEVLDDFN 101

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 102 HWDLGDIVG------AEGTLFKTNHGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 154

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 155 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 214

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 215 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 272

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    ++ N         F R+   +AI++Y     D
Sbjct: 273 DYERMMQMAEDIIRNASHTVNGTANITYNGKEVDLESPFERLTILEAIKKYNPHYTD 329



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 365 GCAEGKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 403

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F      K+  ++          RA + G+PP GG  
Sbjct: 404 FVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 463

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 464 IGIDRLVMLLTDSQTIRDVILFPQMR 489


>gi|59801795|ref|YP_208507.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|239999529|ref|ZP_04719453.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240014706|ref|ZP_04721619.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240017153|ref|ZP_04723693.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
 gi|240081208|ref|ZP_04725751.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240113420|ref|ZP_04727910.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240116233|ref|ZP_04730295.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|240118517|ref|ZP_04732579.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|240121228|ref|ZP_04734190.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
 gi|240124061|ref|ZP_04737017.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|240126319|ref|ZP_04739205.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|240128726|ref|ZP_04741387.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|254494246|ref|ZP_05107417.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|260439953|ref|ZP_05793769.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|268595341|ref|ZP_06129508.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268597319|ref|ZP_06131486.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268599493|ref|ZP_06133660.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268601895|ref|ZP_06136062.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268604225|ref|ZP_06138392.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268682686|ref|ZP_06149548.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268684904|ref|ZP_06151766.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268687112|ref|ZP_06153974.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291043238|ref|ZP_06568961.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|293398557|ref|ZP_06642735.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|75355660|sp|Q5F6U2|SYK_NEIG1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|59718690|gb|AAW90095.1| putative lysyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|226513286|gb|EEH62631.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268548730|gb|EEZ44148.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268551107|gb|EEZ46126.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268583624|gb|EEZ48300.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268586026|gb|EEZ50702.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268588356|gb|EEZ53032.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268622970|gb|EEZ55370.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268625188|gb|EEZ57588.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268627396|gb|EEZ59796.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291012844|gb|EFE04827.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291611028|gb|EFF40125.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|317164775|gb|ADV08316.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 503

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 67/297 (22%), Positives = 129/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++      V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQAVPVKIAGRMMLKRQMGKASFATIQDVTGQIQLYLNNKGVSQEVLDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    ++ N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F +    K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL   + +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDLQTIRDVILFPQMR 501


>gi|138895750|ref|YP_001126203.1| asparaginyl-tRNA synthetase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196248632|ref|ZP_03147332.1| asparaginyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|166231665|sp|A4IQ54|SYN_GEOTN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|134267263|gb|ABO67458.1| Asparaginyl-tRNA synthetase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196211508|gb|EDY06267.1| asparaginyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 430

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 72/294 (24%), Positives = 119/294 (40%), Gaps = 32/294 (10%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKS 64
           +  ++    VG  V +  W+   R  G I FL +RD  G  Q V    N     F+ AK+
Sbjct: 4   TIAEVN-QYVGQEVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVEKANVSEEVFQRAKT 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E  L + G V                 ELS   I++++ A + P+     +E+    
Sbjct: 63  LTQETSLYVTGTVRVDERSPF-------GYELSVTNIQVINEAVDYPITP---KEHGVEF 112

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              +R L LR    H  +  R  +I +         F++   PILT S+PEG  +     
Sbjct: 113 LMDHRHLWLRSRRQHAIMKIRNELIRATYEFFNERGFVKVDAPILTGSAPEGTTELFHTK 172

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             ++ ++  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F 
Sbjct: 173 YFDEDAY--LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFY 229

Query: 245 EQDDILNTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283
           E +D L   E  +  + +               + +    V   F R+ YD+AI
Sbjct: 230 EFEDNLRLQEEYVSYLVQSVLSRCQLELGRLGRDVTKLELVKPPFPRLTYDEAI 283



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 50/166 (30%), Gaps = 21/166 (12%)

Query: 401 FIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
               + +K              + G  +       +  D P +           +  PF 
Sbjct: 277 LTYDEAIKLLHDKGFTDIEWGDDFGAPHETAIAESF--DKPVF-----ITHYPTSLKPFY 329

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           M          N    +     DL+      EI  G  R H  E++ Q      +  E  
Sbjct: 330 MQPD------PNRPDVVLCA--DLIAPEGYGEIIGGSERIHDYELLKQRLEEHHLPLEAY 381

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           E          + G  PH G   G++R V  + G ++VRE   FP 
Sbjct: 382 E----WYLDLRKYGSVPHSGFGLGLERTVAWICGVEHVRETIPFPR 423


>gi|228476075|ref|ZP_04060783.1| asparagine--tRNA ligase [Staphylococcus hominis SK119]
 gi|314936411|ref|ZP_07843758.1| asparagine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|228269898|gb|EEK11378.1| asparagine--tRNA ligase [Staphylococcus hominis SK119]
 gi|313655030|gb|EFS18775.1| asparagine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 430

 Score =  201 bits (510), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 77/322 (23%), Positives = 123/322 (38%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 9   KQYINQEVTIGAWLTNKRSSGKIAFLQLRDGSGFMQGVVVKSEVDEETFKLAKDITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++  A + P+     + +       +R 
Sbjct: 69  LYVIGTITEDNRSDL-------GYEMQVKSIEVIHEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II +         F +   PILTAS+PEG  +       +Q +
Sbjct: 119 LWLRSKKQHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDQDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ ++ EM+F   ++ L
Sbjct: 179 F--LSQSGQLYMEAA-AMAHGRVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHEESL 235

Query: 251 NTMENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRY---GTDKPD 292
              E  +  + +       +                  F RI YDDAI+     G D  +
Sbjct: 236 QVQEQYVSHIVKSVLEHCKLELKALDRDTSKLEKVSVPFPRISYDDAIKFLKEEGFDDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 296 WGEDFGAPHETAIANHYDLPVF 317



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 31/171 (18%)

Query: 401 FIAGDPLKFCSFAADARNHIAQELGIINCNCFE-----FCWIMDFPFYEWNEEEKKIDFA 455
               D +KF            ++ G  +            +I ++P              
Sbjct: 277 ISYDDAIKFLKEEGFDDIEWGEDFGAPHETAIANHYDLPVFITNYP------------TK 324

Query: 456 HNPFTMPQGGM--ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
             PF M       +++   DL++ + +         EI  G  R +  E++ Q      +
Sbjct: 325 IKPFYMQPNPDNEDTVLCADLIAPEGYG--------EIIGGSERINDLELLEQRIDEHQL 376

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                   +       + G  PH G   G++R V  + G ++VRE S FP 
Sbjct: 377 DT----ESYNYYLDLRRYGSVPHSGFGLGLERTVAWISGVEHVRETSPFPR 423


>gi|212696519|ref|ZP_03304647.1| hypothetical protein ANHYDRO_01057 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676455|gb|EEB36062.1| hypothetical protein ANHYDRO_01057 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 639

 Score =  201 bits (510), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 70/348 (20%), Positives = 141/348 (40%), Gaps = 24/348 (6%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +    D      G  VR++G +   R HG + F+D++D  G  QV  N  +   +  K  
Sbjct: 43  SKEIKDNFEEFEGKVVRVAGRIMARRGHGNMSFMDVQDSLGQIQV-VNRKNVMGDNFKET 101

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           +   +  + G+      E        G++ +  +  ++L+ + ++ LP          IR
Sbjct: 102 KGYDIGDLIGI------EGKVFKTNQGEVSIETEHADLLTKSLQI-LPEKWHGLKDPDIR 154

Query: 126 FKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
           ++ R++DL  +   KN  V R++II+ +R  +    F+E  TPIL   +    AR F+  
Sbjct: 155 YRQRYVDLIVNPEVKNVFVLRSKIISEIRRFLENRGFLEVETPILNTIAGGATARPFITH 214

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  A + Y + L+  GFD+ ++I   FR+E   +   P EF  +++  ++
Sbjct: 215 HNSLDIGMY-LRIASELYLKRLIVGGFDKVYEIGRMFRNEGMDATHNP-EFTTMELYQAY 272

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            + +D++   E ++  V  +      V  +   I      RR           + M +  
Sbjct: 273 GDFEDMMEITETMVEDVANKVKGSTVVEFDGNEIELKAPWRR-----------VSMIDAV 321

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           + +   +F   ++        +   +  K   G     +  +E+   +
Sbjct: 322 KEYSGVDFNEITEYEDAVKIAKEKDVEVKDSRG-EIIAEFFDEFVEDK 368



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 67/177 (37%), Gaps = 27/177 (15%)

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
           +  D+        ++      +       E   +     +  +I+D+P            
Sbjct: 334 EYEDAVKIAKEKDVEVKDSRGEIIAEFFDEF--VEDKLIQPTFIVDYP------------ 379

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
              +P    +    SL          ++++   NG EIA+     + +    + F +   
Sbjct: 380 VEISPLAKRKNDDPSL---------TYRFEAFINGSEIANAFSELNDAVDQKERFLDQVA 430

Query: 514 SKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +E  ++           A + GMPP GG+  GIDR++M+L G  ++R+V LFP  +
Sbjct: 431 KREAGDDEAQMMDYDFVNALEVGMPPTGGLGIGIDRLIMILTGQHSIRDVLLFPTMK 487


>gi|300692009|ref|YP_003753004.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum PSI07]
 gi|299079069|emb|CBJ51731.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum PSI07]
          Length = 510

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 62/305 (20%), Positives = 118/305 (38%), Gaps = 30/305 (9%)

Query: 7   HSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           H   DL                  V ++G +   R  G   F  ++D  G  Q     D 
Sbjct: 46  HHAADLHTRYSEADQPALEAANVEVAIAGRMMLKRVMGKASFATVQDGSGQIQFYITRDR 105

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              ++  + +   +  I       +A  +      G++ +  Q++ +LS +   PLP   
Sbjct: 106 VGEDLYAAFKHWDLGDI------IAARGVLFRTNKGELSVQVQELRLLSKSLR-PLPDKF 158

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
                + ++++ R++DL            RT+ I S+R  M    F+E  TP+L      
Sbjct: 159 HGLADQEMKYRQRYVDLIVSPETRNTFRARTKAIASLRRHMGDAGFMEVETPMLHPIPGG 218

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             A+ F+          + L  AP+ Y + L+  GF+R ++I   FR+E   S R   EF
Sbjct: 219 AAAKPFVTHHNALDMQMF-LRIAPELYLKRLIVGGFERVYEINRNFRNEGV-SPRHNPEF 276

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRR 285
             ++   ++ +   +++  EN++R    + +             +S  F R+    AI++
Sbjct: 277 TMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSATLNYQGRELDLSKPFHRLTITQAIQK 336

Query: 286 YGTDK 290
           Y    
Sbjct: 337 YAPQY 341



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +        P       +G+D L     +++L   G EIA+G    +  
Sbjct: 380 LFEETAEAQLWEPT-FIIDYPVEVSPLARGSDTLPGITERFELFITGREIANGFSELNDP 438

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   + F      K+  +           RA + GMPP GG   GIDR+VMLL  + N+R
Sbjct: 439 EDQAERFRKQVEQKDAGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIR 498

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 499 DVILFP 504


>gi|227528916|ref|ZP_03958965.1| lysine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227351190|gb|EEJ41481.1| lysine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 507

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 80/311 (25%), Positives = 125/311 (40%), Gaps = 31/311 (9%)

Query: 4   YRTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
            R H   DL           +S+ G  V ++G + R R  G   F D  D  G  QV A 
Sbjct: 31  KRDHLAQDLHDKYDQFDKEELSEKGQMVIIAGRMTRKRSSGKAGFADFVDRTGKIQVYAR 90

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D    E     +   +    G  +    + I     TG++ + A KI  LS A   PLP
Sbjct: 91  KDMVGDEPYHIFKRADI----GDFLGIEGDVI--KTDTGELTVRAHKITFLSKALR-PLP 143

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TA 171
              E        ++ R+LDL  +    K   +RT II ++R  M    F E  TPIL T 
Sbjct: 144 NKWEGVTDPETIYRQRYLDLISNPESFKRFHQRTAIIKAVRRYMDEHGFTEVETPILNTQ 203

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F+          Y L  A + Y + L+  GF+R +++   FR+E        
Sbjct: 204 AGGANARPFITHHNALDIDMY-LRIATELYLKRLIVGGFERVYELGRIFRNEGMD-PHHN 261

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDA 282
            EF  ++   ++ +  D+++  E +++   +  S+   V+           F RI   DA
Sbjct: 262 PEFTTMETYAAYFDFRDVMDETEGIVKAAAKVVSDDGKVTYQGHEIDLGGDFKRITMVDA 321

Query: 283 IRRY-GTDKPD 292
           ++   G D  D
Sbjct: 322 VKEKTGIDFSD 332



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 10/154 (6%)

Query: 421 AQELGIINCNCFEFCW----IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           A++L   +   ++  W    I++  F E+ E+   +      +  P       K N    
Sbjct: 340 AKKLADEHKVEYKPYWTKGHILNAFFEEFVEDT--LIQPTFVYEYPVEVSPLAKRNKENP 397

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCG 532
               +++L  +G E+A+     +      + F      K    +  E        A + G
Sbjct: 398 AMTDRFELYVDGSELANAFSELNDPIDQKERFEMQAKEKANGNDEAEPVDLDYVEALEYG 457

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP GG+  GIDR+VMLL  AK++R+V LFP  +
Sbjct: 458 MPPTGGLGIGIDRLVMLLTDAKSIRDVILFPTMR 491


>gi|219870540|ref|YP_002474915.1| lysyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219690744|gb|ACL31967.1| lysyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 483

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 129/297 (43%), Gaps = 26/297 (8%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +   R  G   F+ I+D  G  Q+    D+      ++      L   G ++   
Sbjct: 65  VVAGRIMLRRVMGKATFVTIQDVSGQIQLYVARDNLPEGEYENTVG---LLDLGDIIGVK 121

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHK 140
                    TG++ + A ++++L+ A   PLP   +    +  R++ R+LDL   +   +
Sbjct: 122 GTLF--KTKTGELTVRAAELQLLTKALR-PLPNKHKGLTDQETRYRQRYLDLIANEESRR 178

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             V R+++++ +R   + ++FIE  TP+L        A+ F+          Y L  AP+
Sbjct: 179 AFVIRSKVVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMY-LRIAPE 237

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +  D+++  E +LR 
Sbjct: 238 LYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMIEYYQAYADYHDLMDNTEELLRK 296

Query: 260 VFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
           +  +     TV            F RI   +AI +YG       N I M ++ +   
Sbjct: 297 LALDILGTTTVPYGEYVFDFGKPFERITMHEAIVKYG-------NGISMDDLHDFDK 346



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 10/135 (7%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLL 475
             IA+ L I     +    I++   +E   E + I      F M      S     ND  
Sbjct: 348 VAIAKGLNIEIQKSWGLGSIVNA-IFEEVAEHQLIQPT---FLMAHPAEISPLARRNDEN 403

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQC 531
                +++L   G EI +G    + +E   + F     +KE  ++           A + 
Sbjct: 404 PEVTDRFELFIGGREIGNGFSELNDAEDQAERFQAQVAAKEAGDDEAMFYDDDFVVALEH 463

Query: 532 GMPPHGGIAAGIDRI 546
           G+PP  G   GIDR 
Sbjct: 464 GLPPTAGEGLGIDRF 478


>gi|329929807|ref|ZP_08283483.1| asparagine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328935785|gb|EGG32246.1| asparagine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 431

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 75/320 (23%), Positives = 123/320 (38%), Gaps = 33/320 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVL 71
             VG  V +  W++  R  G I FL +RD  G  Q   V +      +E AKS+  E  L
Sbjct: 12  QHVGETVTIGAWINNKRSSGKIQFLQLRDGSGYIQGVVVKSEVSEQVWEDAKSLTQESSL 71

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G++                 E++   IEI+ + E  P+     +E+       +R L
Sbjct: 72  YVTGVIREEPRSQS-------GYEMTVTGIEIIHLTENYPITP---KEHGVDYLMDHRHL 121

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR       +V R  II +++       F     PILT +S EG  +       ++ ++
Sbjct: 122 WLRTQKQRAIMVIRAEIIRAVQEYFDTNGFTLVDPPILTPTSAEGTTNLFHTKYFDEDAY 181

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ EM+F + ++ L 
Sbjct: 182 --LTQSGQLYMEAA-AMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTDHEESLQ 238

Query: 252 TMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
             E  +  V +               + S    +   F RI YD+AI    T   D+   
Sbjct: 239 VQEQFISHVVQSVVKNCRQELETIGRDISKLEAIQAPFPRITYDEAIEFLHTQDFDIPWG 298

Query: 297 IIMHNVTE--HFVHSEFRVF 314
                  E       +  VF
Sbjct: 299 EDFGAPHETAIAEKYDKPVF 318



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 47/138 (34%), Gaps = 7/138 (5%)

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY-DLVCN-- 487
            F+  W  DF         +K D        P G        D    +     D++    
Sbjct: 292 DFDIPWGEDFGAPHETAIAEKYDKPVFITHYPAGIKAFYMKPDPNRPEVVLCADMIAPEG 351

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             EI  G  R    +++ + F    +S E  +          + G  PH G   G++R V
Sbjct: 352 YGEIIGGSQRIDDPQLLEERFKEHDLSMETYQ----WYMDLRKYGTVPHSGFGLGLERTV 407

Query: 548 MLLLGAKNVREVSLFPMS 565
             + G  +VRE   FP +
Sbjct: 408 AWICGLDHVRETIPFPRT 425


>gi|254527072|ref|ZP_05139124.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221538496|gb|EEE40949.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 512

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 70/317 (22%), Positives = 130/317 (41%), Gaps = 25/317 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVM 78
           V L+G V   R  G I F  I D  G  Q+  +    +   E  K +  E +  I  +  
Sbjct: 53  VSLAGRVMAKRVMGKIAFFTISDQEGQIQLYLDKRIINLNLEKQKLLSFEDIKEIVDIGD 112

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                        G++ +  +K E+LS + + PLP           R++ R+LDL  +  
Sbjct: 113 WIGVYGTIKKTNKGELSIKVEKWEMLSKSLQ-PLPDKWHGLTDIEKRYRQRYLDLIVNPN 171

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQ 196
            KN+ K R + I+ +R  +   NF+E  TPIL + +    AR F+          Y L  
Sbjct: 172 SKNVFKTRAKCISFIRKWLDNRNFLEIETPILQSEAGGAEARPFITHHNTLDIPLY-LRI 230

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + ++  GF++ +++   FR+E   +   P EF  +++  ++ +  D++N  E +
Sbjct: 231 ATELHLKRMVVGGFEKVYELGRIFRNEGISTRHNP-EFTSVEIYEAYSDYFDMMNLTEEL 289

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEHFVHSEFRV 313
           ++ V  +                   I  Y   + D   P   I M ++ + +   +F  
Sbjct: 290 IKDVVAD--------------SCGSLIINYQNKEIDFSKPWLRISMKDIVKKYTGIDFDS 335

Query: 314 FS-KILSVNPGYEVWAI 329
           FS   L+     +   +
Sbjct: 336 FSGDFLAAKQAVKNINV 352



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 57/158 (36%), Gaps = 27/158 (17%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
            +      N + ++   +     E  +++D+P               +P   P    + +
Sbjct: 358 VNTMGRLLNEVFEQ--KVESKLIEPTFVIDYP------------VEISPLARPHLDNKEI 403

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
                      +++L   G E+A+            +        ++  +          
Sbjct: 404 ---------VQRFELFIVGRELANAFSELIDPVDQRERMQLQQSLRDEGDLEAHCIDEDF 454

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A + GMPP GG+  GIDR++ML+  + ++R+V  FP
Sbjct: 455 LNALEIGMPPTGGLGIGIDRLIMLITNSASIRDVIPFP 492


>gi|304436292|ref|ZP_07396270.1| lysine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370697|gb|EFM24344.1| lysine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 501

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 75/342 (21%), Positives = 137/342 (40%), Gaps = 27/342 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L   + G  VR++G +  +R HG   F  + D  G  QV    D    +  K    E+  
Sbjct: 56  LAEDEEGKEVRIAGRLMAIRGHGKASFSTLNDRTGNIQVYFKLDVLGEQKYKE---EFKR 112

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++      +      G++ +  +  ++L+ A   PLP           R++ R+L
Sbjct: 113 LDIGDIIGIRG--VVFKTRRGEVTVRVEDFDLLAKALR-PLPEKFHGLKDVDTRYRQRYL 169

Query: 132 DLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQG 189
           DL  +  + +   KRT I+ S+R  + A +F+E  TP+L T +    AR F+        
Sbjct: 170 DLMVNQEVRETFRKRTAILQSIRRYLDARDFLEVETPVLSTLAGGAAARPFVTHHNALDI 229

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A +   + L+  G DR +++   FR+E       P EF  +++  +F +  D+
Sbjct: 230 DLY-LRIATELSLKRLIVGGLDRVYEMGRVFRNEGMDVRHNP-EFTSIEIYQAFADHRDL 287

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           +   E ++R   E+      ++   + I           D   +R  I M++        
Sbjct: 288 MAITEGIVRQAAEDVLGTTKITYQGVEI-----------DLEQVRT-ISMNDAVREATGK 335

Query: 310 EFRVFSKILSVNPGYEVWAIPAK-----GGGGNRAFCDRMNE 346
           +F     +           +P +     GG  N AF +++ E
Sbjct: 336 DFLSCRTVDEARAMAREIHVPFEERHGIGGILNAAFEEKVEE 377



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 71/178 (39%), Gaps = 11/178 (6%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE--KKI 452
             D+     G     C    +AR  +A+E+ +          I++  F E  EE   +  
Sbjct: 325 MNDAVREATGKDFLSCRTVDEAR-AMAREIHVPFEERHGIGGILNAAFEEKVEESLMQPT 383

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
               +P  +    +     +D       +++    G E+A+G    +      Q F +  
Sbjct: 384 FITGHPTEISP--LAKRNADDPR--ITDRFEFFIYGRELANGFTELNDPIDQEQRFLDQL 439

Query: 513 ISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             +E  +            A + G+PP GG+  GIDR+VMLL  + ++R+V LFP  +
Sbjct: 440 AQREAGDAEAHVMDHDYVTALEYGLPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPTMK 497


>gi|325198560|gb|ADY94016.1| lysyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 503

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 128/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      EI     
Sbjct: 54  GEIGKEELDPQGIPVKIAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEILDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +       +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANGESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    ++ N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIIDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F +    K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|306833932|ref|ZP_07467056.1| lysine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304423933|gb|EFM27075.1| lysine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 496

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 64/359 (17%), Positives = 131/359 (36%), Gaps = 32/359 (8%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             ++     ++G +   R  G + F  I+D  G  QV    
Sbjct: 37  RTATSGQLKEKYADKTKEELHEINKTATIAGRLMTKRGKGKVGFAHIQDRDGQIQVYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  +  LS A   PLP 
Sbjct: 97  DAVGDENYQIFKKADL----GDFLGIEGEIMRTDM--GELTIKATHLTHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                     +++ R+LDL  +       V R++II+ +R  +    F+E  TP+L   +
Sbjct: 150 KFHGLTDVETKYRKRYLDLVSNRESFERFVTRSKIISEIRRYLDGLGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFITHHNAQDMDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E +++   +       +S     I  D   +R        
Sbjct: 269 FTSIEVYQAYADFKDIMDLTEGIIQHASKAVKGDGPISYQGTEIAIDKPFKR-------- 320

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARS 350
              + M +  +     +F     +       +   +P +    +          E+   
Sbjct: 321 ---VHMVDAIKEVTGVDFWKEMTLEEAQAIAKEKNVPVEKHFTSVGHIINAFFEEFVEE 376



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 49/207 (23%), Positives = 77/207 (37%), Gaps = 10/207 (4%)

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            S  V G GP++     +  +    R+ M D            +     A A   IA+E 
Sbjct: 295 ASKAVKGDGPISYQGTEIAIDKPFKRVHMVDAIKEVTGVDFWKEMTLEEAQA---IAKEK 351

Query: 425 GIINCNCFEFC-WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            +     F     I++  F E+ EE   +      +  P       K N        +++
Sbjct: 352 NVPVEKHFTSVGHIINAFFEEFVEET--LIQPTFVYGHPVEVSPLAKKNAEDPRFTDRFE 409

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGI 539
           L     E  +     +     L  F     +KE+ ++   G       A + GMPP GG+
Sbjct: 410 LFIMTKEYGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGL 469

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             GIDR+VMLL     +R+V LFP  +
Sbjct: 470 GIGIDRLVMLLTDTTTIRDVLLFPTMK 496


>gi|196250797|ref|ZP_03149484.1| lysyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|196209747|gb|EDY04519.1| lysyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 447

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 63/313 (20%), Positives = 120/313 (38%), Gaps = 15/313 (4%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L    +   V ++G +   R  G   F  I+D  G  Q+    D    +  +  +   +
Sbjct: 5   ELEEQQI--EVAVAGRIMTKRGKGKAGFAHIQDVTGQIQIYVRQDDVGEQQYELFKISDL 62

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             I G+               G++ +     E L+ A   PLP           R++ R+
Sbjct: 63  GDIVGV------RGTMFKTKVGELSIKVSSYEFLTKALR-PLPEKYHGLKDVEQRYRQRY 115

Query: 131 LDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           LDL  +   K   + R+ II SMR  + ++ ++E  TP++ A +    AR F+       
Sbjct: 116 LDLTMNPQSKQTFITRSLIIQSMRRYLDSQGYLEVETPMMHAIAGGAAARPFITHHNALD 175

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            + Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  L++  ++ +  D
Sbjct: 176 MTLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGISTRHNP-EFTMLELYEAYADFRD 233

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I+   EN++  +  E      +      +      RR            +  +   H   
Sbjct: 234 IMKLTENLIAHIATEVLGTTKIQYGEHTVDLTPEWRRLHMVDAIKEY--VGVDFWRHMDD 291

Query: 309 SEFRVFSKILSVN 321
            E R  +K   V 
Sbjct: 292 EEARALAKEHGVE 304



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 6/154 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E G+       F  I++  F+E   E + I          +    + K  D    
Sbjct: 295 RALAKEHGVEIAPHMTFGHIVN-EFFEQKVESQLIQPTFIYGHPVEISPLAKKNPD-DPR 352

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
              +++L   G E A+     +      Q F      +E               A + GM
Sbjct: 353 FTDRFELFIVGREHANAFTELNDPIDQRQRFEAQLKEREQGNDEAHEMDEDFLEALEYGM 412

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  G+DR+VMLL  + ++R+V LFP  ++
Sbjct: 413 PPTGGLGIGVDRLVMLLTNSPSIRDVLLFPQMRH 446


>gi|330832369|ref|YP_004401194.1| lysyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329306592|gb|AEB81008.1| lysyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 496

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 68/345 (19%), Positives = 131/345 (37%), Gaps = 17/345 (4%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   S  DL   ++     ++G +   R  G   F  I+D  G  Q+    D    E  
Sbjct: 47  QYEDKSKEDL--EELRQTAIIAGRIMTKRGKGKAGFAHIQDREGQIQIYVRKDDVGEENY 104

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +  +   +    G  +    +    N+  G++ + A+K+  LS A   PLP         
Sbjct: 105 EIFKKADL----GDFIGVEGDVFKTNV--GELSIHARKLTHLSKALR-PLPEKFHGLTDI 157

Query: 123 SIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             R++ R+LDL  +       V R++II+ +R  +    F+E  TP+L   +   A    
Sbjct: 158 ETRYRKRYLDLITNRESFDRFVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAARPF 217

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           +     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  
Sbjct: 218 ITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQ 276

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  DI++  E +++   +       V+     I   +  +R           I    
Sbjct: 277 AYADYQDIMDLTEGIIQHTAKAVVGDGPVTYQGTEIAIHEPFKRIHMVDA-----IKEQT 331

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
             + +    F   +K L+      V     + G    +F +   E
Sbjct: 332 GVDFWQEMSFEE-AKALAAEHKVPVEKHHTEVGQIINSFFEEYVE 375



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K ND       +++L     E  +     +     L+ F     +KE+ ++   G     
Sbjct: 396 KKNDEDPRFTDRFELFIMTKEYGNAFTELNDPIDQLERFEAQAKAKELGDDEATGVDYDY 455

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 456 IEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|158522857|ref|YP_001530727.1| lysyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158511683|gb|ABW68650.1| lysyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 484

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 65/290 (22%), Positives = 117/290 (40%), Gaps = 20/290 (6%)

Query: 6   THSCGD-LGVSDVGSFVR--------LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           TH+  D LG+ + G            L+G +  +   G   F+  RD  G+ Q     D 
Sbjct: 19  THTVADMLGLIEAGRPPSPESDNLPVLAGRMMAINRFGKAAFVRFRDRTGLMQAYIQKDK 78

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +     +   V  + GL              TG+  + A+ I +L  A   PLP   
Sbjct: 79  VGSDAYALFKQMDVGDVIGL------SGGLFQTKTGEWTVQAETIRLLCKA-TRPLPEKF 131

Query: 117 EREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                   R++ R+LDL  ++  ++  ++R+R I ++R  ++  +F+E  TP++      
Sbjct: 132 HGLKDPEKRYRKRYLDLIMNSATRDVFIRRSRAIQAIRTFLLERDFLEVETPMMQPIPGG 191

Query: 176 G-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+          + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF
Sbjct: 192 AEARPFVTHHNALDMDLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGISTRHNP-EF 249

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
             L+   ++ +   ++   E++   V E  +    V      I +     
Sbjct: 250 TMLEFYQAYADYQGLMAMTEDLFCHVAEAVTGSRQVVYQAHTIDFSGPWP 299



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 4/96 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPP 535
            +++L   G EIA+G    +  E   Q F+    +++  ++           A + GMPP
Sbjct: 386 DRFELFIAGNEIANGFSELNDPEEQRQRFAAQVAARKAGDDEAHFMDEDYIEALEYGMPP 445

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             G   GIDR+VMLL  A ++REV LFP  +     
Sbjct: 446 TAGEGIGIDRLVMLLTDAPSIREVILFPHMRREEAP 481


>gi|311030328|ref|ZP_07708418.1| asparaginyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 430

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 78/321 (24%), Positives = 123/321 (38%), Gaps = 34/321 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVL 71
             VG  V +  W+   R  G I FL +RD  G  Q   V A  + + F+ AKSV  E  +
Sbjct: 10  KHVGEEVTIGAWIANKRSSGKIAFLQLRDGSGFIQGVVVKAEVEESVFQAAKSVTQETSV 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G+V                 EL    +E++  A + P+     + +        R L
Sbjct: 70  YVTGIVREDERSPF-------GYELGVTGVEVIHEAVDYPITP---KNHGTEFLMDNRHL 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR    H  +  R  +I +         F +   PILT S+PEG  +       ++ ++
Sbjct: 120 WLRSKKQHAIMKIRNEVIRATYEFFNDNGFSKVDPPILTGSAPEGTSELFATKYFDEDAY 179

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F E +D L 
Sbjct: 180 --LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYEFEDNLV 236

Query: 252 TMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRY---GTDKPDL 293
             E  +  + +               + S    +   F RI YDDAI+     G D    
Sbjct: 237 VQEQYVSFIVQSVVKNCKLELGILDRDVSKLEKIQAPFPRISYDDAIKFLNEKGFDDIQW 296

Query: 294 RNPIIMHNVTEHFVHSEFRVF 314
            +     + T      +  VF
Sbjct: 297 GDDFGAPHETAIAESYDMPVF 317



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 63/200 (31%), Gaps = 33/200 (16%)

Query: 374 PVAKH--LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
            V K+  L +   +    +L+            D +KF +           + G  +   
Sbjct: 248 SVVKNCKLELGILDRDVSKLEKIQAPFPRISYDDAIKFLNEKGFDDIQWGDDFGAPHETA 307

Query: 432 FE-----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDL 484
                    +I  +P                PF M       + +   DL++ + +    
Sbjct: 308 IAESYDMPVFITHYP------------TGIKPFYMQPHPERDDVVLCADLIAPEGYG--- 352

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
                EI  G  R H  +++ Q      +      + +       Q G  PH G   G++
Sbjct: 353 -----EIIGGSERIHDYDLLKQRLEEHNLE----SDAYKWYLELRQYGSVPHSGFGLGLE 403

Query: 545 RIVMLLLGAKNVREVSLFPM 564
           R V  + G ++VRE   FP 
Sbjct: 404 RTVAWISGTEHVREAIPFPR 423


>gi|242373763|ref|ZP_04819337.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348500|gb|EES40102.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 430

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 78/322 (24%), Positives = 122/322 (37%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 9   KQHLNQEVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEETFQLAKDITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++  A + P+     + +       +R 
Sbjct: 69  LYVTGTITEDNRSDL-------GYEMQVKSIEVIHEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II +       + F +   PILTAS+PEG  +       +Q +
Sbjct: 119 LWLRSKKQHAVMKIRNEIIRATYEFFNEKGFTKIDPPILTASAPEGTSELFHTKYFDQDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 179 F--LSQSGQLYMEAA-AMAHGRVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHAESL 235

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDAI      G D  +
Sbjct: 236 EIQEQYVTHVVQSVLKNCVLELKALDRDTTKLEKVATPFPRISYDDAIEFLKQEGFDDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 296 WGEDFGAPHETAIANHYDLPVF 317



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 68/200 (34%), Gaps = 33/200 (16%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCF--FIAGDPLKFCSFAADARNHIAQELGIINCNC 431
            V K+  +      R    ++   + F      D ++F            ++ G  +   
Sbjct: 248 SVLKNCVLELKALDRDTTKLEKVATPFPRISYDDAIEFLKQEGFDDIEWGEDFGAPHETA 307

Query: 432 FE-----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM--ESLKGNDLLSIKAFQYDL 484
                    +I ++P         +I     PF M       +++   DL++ + +    
Sbjct: 308 IANHYDLPVFITNYP--------TRIK----PFYMQPNPDNEDTVLCADLIAPEGYG--- 352

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
                EI  G  R +  +++ +      +     E  +       + G  PH G   G++
Sbjct: 353 -----EIIGGSERINDLDLLEERIKEHELD----EESYSYYLDLRRYGSVPHSGFGLGLE 403

Query: 545 RIVMLLLGAKNVREVSLFPM 564
           R V  + G ++VRE S FP 
Sbjct: 404 RTVAWISGVEHVRETSPFPR 423


>gi|160946714|ref|ZP_02093917.1| hypothetical protein PEPMIC_00672 [Parvimonas micra ATCC 33270]
 gi|158447098|gb|EDP24093.1| hypothetical protein PEPMIC_00672 [Parvimonas micra ATCC 33270]
          Length = 493

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 81/368 (22%), Positives = 151/368 (41%), Gaps = 42/368 (11%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           T    ++     +  G  VRL+G +   R HG + F+D++D  G  Q+    D     +E
Sbjct: 36  TIYAKEIKDNYENYEGKVVRLAGRIRTKRGHGKVCFMDLQDFSGKIQLFNKLDVLGESYE 95

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K++    ++ ++G V +  A         G+I + + K+ +L+ + +  LP       
Sbjct: 96  EVKTLDIGDIVGVEGEVFTTHA---------GEISIRSSKVVLLTKSLQ-LLPEKFHGLK 145

Query: 121 PESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGAR 178
              +R++ R++DL  +   K+  V R++II+S+R  + +  F+E  TPIL T      AR
Sbjct: 146 DVDLRYRQRYVDLIVNPEIKDVFVMRSKIISSIRKYLDSRGFLEVETPILNTIPGGANAR 205

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+          Y L  A + Y + L+  GFD+ +++   FR+E       P E+  ++
Sbjct: 206 PFITHHNTLDIDMY-LRIANELYLKRLIVGGFDKVYEMGRMFRNEGMDKLHNP-EYTAIE 263

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNG---------NTVSNNFLRICYDDAIRRY-GT 288
           +  ++V+ ++++   E ++  V  E                   + RI   DA++ Y G 
Sbjct: 264 LYQAYVDYEEMMKLCEEMVYTVCMEVVGKSEVELQGKVIDFKPPWRRISMVDAVKEYAGV 323

Query: 289 DKPDLRNPIIMH--------NVTEHFVHSE-----FRVFSKILSVNPGYEVWAIPAKGGG 335
           D   +                +TEH    E     F  F +   V P +           
Sbjct: 324 DFETILTDEEARKIAIEKKIEITEHTTRGEIISLFFEEFCEEYMVQPTFVTKHPVEISPL 383

Query: 336 GNRAFCDR 343
             R   D+
Sbjct: 384 AKRDPKDK 391



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 7/130 (5%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHM 500
           F+E   EE  +       T     +  L   D    +   +++   N  EIA+     + 
Sbjct: 358 FFEEFCEEYMVQPTF--VTKHPVEISPLAKRDPKDKRYTQRFEAFVNCGEIANAFSELND 415

Query: 501 SEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           +    Q F     ++E  ++           A + G+PP GG+  GIDR++M L     +
Sbjct: 416 AIDQKQRFLKQVEARENGDDEAQMMDYDFINALEIGLPPTGGMGIGIDRLIMYLTNQDTI 475

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 476 RDVLLFPTMK 485


>gi|297584385|ref|YP_003700165.1| asparaginyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142842|gb|ADH99599.1| asparaginyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 429

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 75/307 (24%), Positives = 125/307 (40%), Gaps = 32/307 (10%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKS 64
           +  ++G   V   V +  W+   R  G I FL +RD  G  Q   V A  +   F++AK 
Sbjct: 4   TISEVGK-YVDQSVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEEDIFKLAKE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E  L + G V                 EL+ + +E++ +AE+ P+     +E+    
Sbjct: 63  LTQESSLYVTGKVREDDR-------APSGYELTVESVEVIQMAEDYPITP---KEHGTEF 112

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              +R L LR    H  +  R  II +       + F +   PILT SS EG  +     
Sbjct: 113 LMDHRHLWLRSRKQHAIMKIRNEIIRATYEFFNEQGFTKIDPPILTGSSAEGTTNLFHTK 172

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             ++ ++  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F+
Sbjct: 173 YFDEDAY--LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFM 229

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRYGTD 289
           + D+ L   EN +  V +       +                  F RI YD+AI     +
Sbjct: 230 DHDESLVLQENYVSFVVQAVLQNCKLELKTLERDTATLEKISAPFPRISYDEAISFLQKE 289

Query: 290 KPDLRNP 296
             ++   
Sbjct: 290 GYEIEWG 296



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 58/152 (38%), Gaps = 27/152 (17%)

Query: 418 NHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               ++ G  +         +  +I ++P     ++ K      +P        + +   
Sbjct: 293 IEWGEDFGAPHETAIAEAHEKPVFITNYP-----KDIKAFYMKPHP-----ERDDVVLCA 342

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DL++ + +         EI  G  R   +E+M Q ++   +S    E+ +       + G
Sbjct: 343 DLIAPEGYG--------EIIGGSQRIDDAELMKQRYAEHNLS----EDAYKWYLDLRKYG 390

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             PH G   G++R V  + G ++VRE   FP 
Sbjct: 391 TVPHSGFGLGLERTVAWISGTEHVRETIPFPR 422


>gi|327383534|gb|AEA55010.1| Lysyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327386727|gb|AEA58201.1| Lysyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 499

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 71/339 (20%), Positives = 133/339 (39%), Gaps = 36/339 (10%)

Query: 2   HRY-RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH+   +             D    V ++G +   R  G + F DIRD  G  Q+
Sbjct: 36  HRFDRTHTAAKVREEFGEDDKETLLDEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 95

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    +     +   +    G ++  S E +     +G++ + A  +  L+ A   
Sbjct: 96  YVRKDVVGDDNYMIFKKADL----GDILGISGEVM--KTDSGELTVKANHVTHLAKALR- 148

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           +++ R+LDL  +       VKRT+I++++R  +    F+E  TP+L
Sbjct: 149 PLPDKWHGLTDVEQKYRKRYLDLISNEDSFDRFVKRTKIVSAVREYLDNNGFLEVETPVL 208

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + L+  G +R ++I   FR+E   + 
Sbjct: 209 HNQAGGANARPFVTHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTK 267

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF +L+   ++ +  D++   E + R    +  +   ++              Y  
Sbjct: 268 HNP-EFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLT--------------YQG 312

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
              DL  P    N+ +         F   +SV+   ++ 
Sbjct: 313 MAIDLDAPFARINMLDAIKDKTGVDFWPEMSVDDARKLA 351



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K N        +++L   G E A+     +      Q F      K    +   G     
Sbjct: 398 KKNPKDPRFVERFELFVGGGEYANAFTELNDPIDQRQRFEAQAAEKSAGNDEAQGIDDDY 457

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 458 VEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 495


>gi|325130491|gb|EGC53248.1| lysyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 503

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 69/297 (23%), Positives = 128/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++   G  V+++G +   R  G   F  I+D  G  Q+  N      EI     
Sbjct: 54  GEIGKEELDPQGIPVKIAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEILDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +       +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANGESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    +S N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTAKISYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F +    K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|291565884|dbj|BAI88156.1| asparaginyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 463

 Score =  200 bits (509), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 68/352 (19%), Positives = 121/352 (34%), Gaps = 45/352 (12%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L     G  V + GWV   R      F+++ D   +  +    +    + A  +R     
Sbjct: 10  LRTGKPGEAVTVQGWVRTKRELKEFTFVEVNDGSCMANLQVVLNPDLTDYAAILRQ---- 65

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +    E +++     +IEL A  +++   A+     +  +R   E +R     L
Sbjct: 66  LNTGASVEVVGEIVSSPAKGQRIELKADTVQVYGEADPQTYVLQKKRHSFEFLR-TIAHL 124

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +T       R     ++        F+   TPI+TAS  EGA +    + ++    
Sbjct: 125 RSRTNTYGAVFRVRNACAAAVHQFFQERGFLWIHTPIITASDCEGAGELFSVTSLDLNNL 184

Query: 190 ------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q +  +MA  F   +   P FR E+  + R   EF
Sbjct: 185 PLTDTKAIDFSQDFFGKRAFLTVSGQLEAEIMALAFGNVYTFGPTFRAENSNTSRHLAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NN 273
           + ++ EM+F + D  ++  E  L+ +F+                              N 
Sbjct: 245 WMIEPEMAFCDLDGNMDLAEAFLKHIFKSVLEQCPEDLEFFNQRIDNSVLATADNIINNE 304

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
           F RI Y +AI            P+   +   +EH  +    +F K + V   
Sbjct: 305 FERITYTEAIALLEKSDRTFEYPVSWGLDLQSEHERYLAEELFKKPVIVTDY 356



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 54/153 (35%), Gaps = 30/153 (19%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            ++A+EL        +   + D+P                 F M Q         D  ++
Sbjct: 340 RYLAEELFK------KPVIVTDYP------------QEIKAFYMRQNE-------DGKTV 374

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A    L     EI  G  R    +++ +    + I+ + +           + G  PH 
Sbjct: 375 RAMDV-LAPKVGEIIGGSQREERLDILQKRMEALQINPDELW----WYLDLRRYGTVPHA 429

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G   G +R+V  + G  N+R+V  FP +    D
Sbjct: 430 GFGLGFERVVQFMTGMANIRDVIPFPRAPQTID 462


>gi|191639442|ref|YP_001988608.1| Lysyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|239630366|ref|ZP_04673397.1| lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|190713744|emb|CAQ67750.1| Lysyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|239526649|gb|EEQ65650.1| lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 498

 Score =  200 bits (509), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 71/339 (20%), Positives = 133/339 (39%), Gaps = 36/339 (10%)

Query: 2   HRY-RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH+   +             D    V ++G +   R  G + F DIRD  G  Q+
Sbjct: 35  HRFDRTHTAAKVREEFGEDDKETLLDEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 94

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    +     +   +    G ++  S E +     +G++ + A  +  L+ A   
Sbjct: 95  YVRKDVVGDDNYMIFKKADL----GDILGISGEVM--KTDSGELTVKANHVTHLAKALR- 147

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           +++ R+LDL  +       VKRT+I++++R  +    F+E  TP+L
Sbjct: 148 PLPDKWHGLTDVEQKYRKRYLDLISNEDSFDRFVKRTKIVSAVREYLDNNGFLEVETPVL 207

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + L+  G +R ++I   FR+E   + 
Sbjct: 208 HNQAGGANARPFVTHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTK 266

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF +L+   ++ +  D++   E + R    +  +   ++              Y  
Sbjct: 267 HNP-EFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLT--------------YQG 311

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
              DL  P    N+ +         F   +SV+   ++ 
Sbjct: 312 MAIDLDAPFARINMLDAIKDKTGVDFWPEMSVDDARKLA 350



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K N        +++L   G E A+     +      Q F      K    +   G     
Sbjct: 397 KKNPKDPRFVERFELFVGGGEYANAFTELNDPIDQRQRFEAQAAEKSAGNDEAQGIDDDY 456

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 457 VEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 494


>gi|78189143|ref|YP_379481.1| lysyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|123729854|sp|Q3ARD7|SYK_CHLCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78171342|gb|ABB28438.1| Lysyl-tRNA synthetase, class-2 [Chlorobium chlorochromatii CaD3]
          Length = 511

 Score =  200 bits (509), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 67/324 (20%), Positives = 134/324 (41%), Gaps = 32/324 (9%)

Query: 6   THSCGDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH    +      +  + V ++G +  +R  G   F +++D  G  Q+    D    ++ 
Sbjct: 49  THHSATILTEFQDEAKTPVAVAGRIMTIRKMGKASFFNVQDSAGRIQIYLKKD----DVG 104

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++  + + L   G ++  +  T      TG+I + A+ +E+L+ +         +    E
Sbjct: 105 EAAYNMFKLLDIGDIVGVTGYTFRTK--TGEISIHAESLELLTKSLRPIPIAKEKEVDGE 162

Query: 123 ----------SIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
                      +R++ R++DL     + +  +KRT I+ +MR       ++E  TPIL  
Sbjct: 163 KVVFDAFSDKELRYRQRYVDLIVNPEVRETFIKRTAIVAAMRNFFARHGWLEVETPILQP 222

Query: 172 S-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F           Y L  A + Y + L+  GFD  F+ A  FR+E       
Sbjct: 223 IYGGAAARPFTTHHNALDMQLY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEGIDRFHN 281

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDD 281
           P EF Q+++ +++ + + ++N +E ++     E +  +T +           F R+   D
Sbjct: 282 P-EFTQVELYVAYKDYNWMMNLVEELIYTTAMEVNKSDTTTFLGHEISVKPPFRRLTISD 340

Query: 282 AIRRYGTDKPDLRNPIIMHNVTEH 305
           AI  Y       ++   + N+ + 
Sbjct: 341 AIAEYTDKDIRNKSEEELRNIAKE 364


>gi|78356412|ref|YP_387861.1| lysyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218817|gb|ABB38166.1| lysyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 532

 Score =  200 bits (509), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 114/297 (38%), Gaps = 21/297 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +      +G +   R  G + F  + D  G  Q  A+ DS   +     +   +  I
Sbjct: 89  LETLDQEFSCAGRIVSQRSFGKVTFFHLLDKSGKMQCYASRDSLGADAYSVFKKFDIGDI 148

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+              TG++ +    +++L+ +   PLP           R++ R++DL
Sbjct: 149 VGVC------GTLFRTKTGELTIQCSSVQLLTKSIR-PLPEKYHGLKDVETRYRQRYVDL 201

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
                  +   KR +I+   R  M    F+E  TP++        A+ F+          
Sbjct: 202 IVTPRTREIFRKRGQIVREFRNFMEERGFMEVETPMMQPIPGGATAKPFVTHHNALDMQL 261

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y +  AP+ Y + L+  GF++ F+I   FR+E   +   P EF   +   ++   +D+++
Sbjct: 262 Y-MRIAPELYLKRLLVGGFEKVFEINRNFRNEGISTQHNP-EFTMCEFYWAYARFEDLMD 319

Query: 252 TMENVLRGVFEEFSN----------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
             E +   + ++              +     + R+ + D++ + G   P+  N   
Sbjct: 320 LTEQLFSRLAQKVCGSTVITYQGQEVDLTPGKWQRMTFHDSLEKVGGHAPEFYNDYE 376



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 16/147 (10%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++LG +    F+             + E K+   H  +  P       + ND       
Sbjct: 392 GEKLGKLQAKLFDL------------DVEYKLIQPHFIYHYPTDISPLSRRNDDNPDVTD 439

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPH 536
           +++L   G E+A+     +      + F +    KE  ++          RA + GMPP 
Sbjct: 440 RFELFITGRELANAFSELNDPVDQRKRFDDQVAEKEAGDDEAHFMDEDYLRALEYGMPPA 499

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++REV LFP
Sbjct: 500 AGQGVGIDRLVMLLTDSASIREVILFP 526


>gi|194099248|ref|YP_002002342.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|238690219|sp|B4RP57|SYK_NEIG2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|193934538|gb|ACF30362.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
          Length = 503

 Score =  200 bits (509), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 67/297 (22%), Positives = 129/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++      V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GEIGKEELDPQAVPVKIAGRMMLKRQMGKASFATIQDVTGQIQLYLNNKGVSQEVLDGFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSDIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    ++ N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F +    K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL   + +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDLQTIRDVILFPQMR 501


>gi|116493270|ref|YP_805005.1| lysyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122265266|sp|Q03E09|SYK_PEDPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116103420|gb|ABJ68563.1| Lysyl-tRNA synthetase (class II) [Pediococcus pentosaceus ATCC
           25745]
          Length = 498

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 75/396 (18%), Positives = 146/396 (36%), Gaps = 39/396 (9%)

Query: 2   HRY-RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH    L             + G    ++G +   R  G + F D++D  G  Q+
Sbjct: 33  HRFERTHLAAQLHEKYSDMTKEELDEQGVVATIAGRMISKRGKGKVGFADLKDRSGKMQL 92

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    ++ K  +   +    G  +  + + +  ++  G++ +    +  LS A   
Sbjct: 93  YVRKDVLGEDVYKVFKRSDI----GDFLGVTGDVMKTDM--GELTIKVTGLTFLSKALR- 145

Query: 111 PLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP            ++ R+LDL   D       KRT+I++++R  +   +F E  TP+L
Sbjct: 146 PLPDKFHGLQNVEQIYRQRYLDLIANDDSMDRFRKRTKIVSAVRRYLDGNDFAEVETPVL 205

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T +    AR F+        + Y L  A + + + L+  G +R ++I   FR+E   + 
Sbjct: 206 HTQAGGASARPFITHHNALDINLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTR 264

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  L+   ++ +  D+++  E + +      S+         +I Y       G 
Sbjct: 265 HNP-EFTMLETYAAYFDFHDVMDETEGIFKAAVAAVSDDG-------KITYQGTELDLGQ 316

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           D   L     M +  + +   +F     +       +   I  +         +   E  
Sbjct: 317 DFERLH----MVDAIKKYAGVDFWPKMSVEDAKKLADENGIHYESWWTVGHIINEFFEEK 372

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
                    +I+      G+   + P+AK     + 
Sbjct: 373 VQDQLKQPVFIY------GHPVEISPLAKKNAEDDR 402



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 10/154 (6%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLS 476
            +A E GI   + +    I++    E+ EE+ +       F        S   K N    
Sbjct: 346 KLADENGIHYESWWTVGHIIN----EFFEEKVQDQLKQPVFIYGHPVEISPLAKKNAEDD 401

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCG 532
               +++L   G E  +     +        F      +E   +   G       A + G
Sbjct: 402 RFTDRFELYILGNEYGNAFTELNDPIDQRARFEAQVAEREAGNDEAEGIDEDYIEALEYG 461

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP GG+  GIDR+VMLL  A ++R+V LFP  +
Sbjct: 462 MPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTMK 495


>gi|241759648|ref|ZP_04757749.1| lysine--tRNA ligase [Neisseria flavescens SK114]
 gi|241320020|gb|EER56401.1| lysine--tRNA ligase [Neisseria flavescens SK114]
          Length = 503

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 71/315 (22%), Positives = 131/315 (41%), Gaps = 23/315 (7%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           GD+G  ++      V+++G +   R  G   F  I+D  G  Q+  N      E+     
Sbjct: 54  GDIGKEELDPQAVPVKIAGRMMLKRQMGKASFATIQDVTGQIQLYLNNKGVSQEVLDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G       E        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVGT------EGTLFKTNHGELTVRVSNIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPDLRN 295
           + + ++   E+++R      +    +S N         F R+    AI++Y     D + 
Sbjct: 285 DYERMMQMAEDIIRNASRAVNGTAKISYNGKEVDLESPFERLTILGAIKKYNPHYTDEQL 344

Query: 296 PIIMHNVTEHFVHSE 310
                   E   H E
Sbjct: 345 NDEEWLKKEIVKHGE 359



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIIDYP---------------------VEVSPLARASDSKPGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F      K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|218439606|ref|YP_002377935.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218172334|gb|ACK71067.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 463

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 131/377 (34%), Gaps = 51/377 (13%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---IAKSVRSEWVLCIDG 75
             V ++GWV   R   G  F+++ D   +  +    D    +   + +++ +   + + G
Sbjct: 17  ETVTIAGWVRTKRELKGFAFMEVNDGSCMANLQVVLDPQVPDYDTLVQTINTGASVVVKG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++    +         +IEL A  + +   A+    P+  +R   E +R     L  R 
Sbjct: 77  NLVPSPGKG-------QRIELKATTVTLYGEADPQTYPLQKKRHSFEFLR-TIAHLRSRT 128

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           +TL   +  R    N++        F+   TPI+TAS  EGA +    + ++        
Sbjct: 129 NTLGAVMRVRNACANAIHRFFQERGFLWVHTPIITASDCEGAGELFTVTSLDFNKLPRNK 188

Query: 190 --------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q +  +MA  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 QQEIDFSQDFFGKRAYLTVSGQLEAEIMALAFQNVYTFGPTFRAENSNTSRHLAEFWMVE 248

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            EM+F + +   +  E  L+ +F+   +       F                      RI
Sbjct: 249 PEMAFCDLNGDQDLAEAFLKYIFKFVLDHCQEDMEFFNQRIDNTVLETAENIINNEFGRI 308

Query: 278 CYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y +AI            P+       +EH  +    +F K L V+   +          
Sbjct: 309 TYTEAIALLEKADRQFEYPVEWGVDLQSEHERYLAEELFKKPLIVSNYPKDIKAFYMRLN 368

Query: 336 GNRAFCDRMNEWARSQG 352
            +      M+  A   G
Sbjct: 369 DDDKTVAAMDVLAPKIG 385



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 4/95 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    L     EI  G  R    +V+    + +G+  E +           + 
Sbjct: 368 NDDDKTVAAMDVLAPKIGEIIGGSQREERLDVLENRIAQMGLPPEDLW----WYLDLRRF 423

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G  PH G   G +R+V  + G  N+R+V  FP + 
Sbjct: 424 GTVPHAGFGLGFERVVQFMTGMGNIRDVIPFPRTP 458


>gi|114330878|ref|YP_747100.1| lysyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|114307892|gb|ABI59135.1| lysyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 532

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 66/302 (21%), Positives = 128/302 (42%), Gaps = 22/302 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   S  +L    V   V+++G +   R  G   F  I+D  G  Q+  + D      
Sbjct: 79  EKYDNDSREELESGQV--KVKVAGRMLFKRVMGKASFATIQDMSGRIQLYISNDHTGESA 136

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            ++ R   +  I G      AE I     T ++ L   ++ +L+ +   PLP        
Sbjct: 137 HEAFRHYDLGDILG------AEGILFKTRTDELSLRVTRLRLLTKSLR-PLPEKFHGLID 189

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  +++ R+LDL  +   + +   R++II ++R  ++   ++E  TP++ +      AR 
Sbjct: 190 QEQKYRRRYLDLITNEETRKVFLVRSKIIQAVREFLVNRGYLEVETPMMHSIPGGATARP 249

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+        S Y L  AP+ Y + L+  G ++ F+I   FR+E   +   P EF  L+ 
Sbjct: 250 FITHHNALDMSLY-LRIAPELYLKRLVVGGMEKVFEINRNFRNEGISTRHNP-EFTMLEF 307

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDK 290
             ++ +   +++  E++LR V  +      +            F R+    AI +Y  + 
Sbjct: 308 YEAYQDHHYLMDLTESMLREVALKVLGTTRIVYQQREMDLARPFARLTVMQAILKYHPEN 367

Query: 291 PD 292
            +
Sbjct: 368 SE 369



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 58/155 (37%), Gaps = 29/155 (18%)

Query: 421 AQELGIINCNC----FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             +L + +       FE  +I+D+P                            + ND   
Sbjct: 397 GLQLALFDETTEHLLFEPVFIVDYP---------------------AEVSPLARRNDQNP 435

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCG 532
               +++L   G EIA+G    +  E     F     +K        +      +A + G
Sbjct: 436 EITDRFELYIAGREIANGFSELNDPEDQASRFLEQARAKEAGDMEAMHYDADYIQALEYG 495

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +PP  G   GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 496 LPPTAGEGIGIDRLVMLLTDSPSIRDVILFPQLRK 530


>gi|284050824|ref|ZP_06381034.1| asparaginyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 463

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 68/352 (19%), Positives = 120/352 (34%), Gaps = 45/352 (12%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L     G  V + GWV   R      F+++ D   +  +    +    + A  +R     
Sbjct: 10  LRTGKPGEAVTVQGWVRTKRELKEFTFVEVNDGSCMANLQVVLNPDLTDYAAILRQ---- 65

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +    E +++     +IEL A  + +   A+     +  +R   E +R     L
Sbjct: 66  LNTGASVEVVGEIVSSPAKGQRIELKADTVRVYGEADPQTYVLQKKRHSFEFLR-TIAHL 124

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +T       R     ++        F+   TPI+TAS  EGA +    + ++    
Sbjct: 125 RSRTNTYGAVFRVRNACAAAVHQFFQERGFLWIHTPIITASDCEGAGELFSVTSLDLNNL 184

Query: 190 ------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q +  +MA  F   +   P FR E+  + R   EF
Sbjct: 185 PLTDTKAIDFSQDFFGKRAFLTVSGQLEAEIMALAFGNVYTFGPTFRAENSNTSRHLAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NN 273
           + ++ EM+F + D  ++  E  L+ +F+                              N 
Sbjct: 245 WMIEPEMAFCDLDGNMDLAEAFLKHIFKSVLEQCPEDLEFFNQRIDNSVLATADNIINNE 304

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
           F RI Y +AI            P+   +   +EH  +    +F K + V   
Sbjct: 305 FERITYTEAIALLEKSDRTFEYPVSWGLDLQSEHERYLAEELFKKPVIVTDY 356



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 54/153 (35%), Gaps = 30/153 (19%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            ++A+EL        +   + D+P                 F M Q         D  ++
Sbjct: 340 RYLAEELFK------KPVIVTDYP------------QEIKAFYMRQNE-------DGKTV 374

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           +A    L     EI  G  R    +++ +    + I+ + +           + G  PH 
Sbjct: 375 RAMDV-LAPKVGEIIGGSQREERLDILQKRMEALQINPDELW----WYLDLRRYGTVPHA 429

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G   G +R+V  + G  N+R+V  FP +    D
Sbjct: 430 GFGLGFERVVQFMTGMANIRDVIPFPRAPQTID 462


>gi|304316831|ref|YP_003851976.1| asparaginyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778333|gb|ADL68892.1| asparaginyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 433

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 71/334 (21%), Positives = 130/334 (38%), Gaps = 30/334 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCI 73
           VG  V + GW++  R  G I FL IRD  G  Q V   +      FE+   +  E  + +
Sbjct: 15  VGEEVTIKGWLYNKRSSGKIKFLIIRDGSGFVQGVVVKNEVAEDVFELCDKLTQESSITV 74

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V                 EL+   I+++ +A          +E+        R L +
Sbjct: 75  TGVVRKDDRSPY-------GYELTISSIKLIQMA--FNDYPISLKEHGVDFLLDNRHLWI 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  +I +++  +    F+   +PI+T S+ EG  D        + ++  
Sbjct: 126 RTPKQHAILSIRHEVIKAIQEFLNNNGFVRIDSPIITPSTCEGTSDLFQIDYFGENAY-- 183

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y Q   A    + +   P FR E  ++ R   EF+ ++ EMSFV+  + +   
Sbjct: 184 LSQTGQLY-QEAAAMALGKVYSFGPTFRAEKSKTRRHLNEFWMVEPEMSFVDHYENMEIQ 242

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           E ++  + +               + S    +   F R+ YD+AI     +  ++     
Sbjct: 243 EKLVEYIVQSVLENRSKELKELGRDLSKLEKIKTPFPRLTYDEAIEILKKNGYEIEWGND 302

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
           + +  E F+ ++F     I       + + +  K
Sbjct: 303 LGSPDETFLSNQFDKPVFITEYPAKCKAFYMQPK 336



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 53/155 (34%), Gaps = 31/155 (20%)

Query: 418 NHIAQELGIINC----NCF-EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM--ESLK 470
                +LG  +     N F +  +I ++P                 F M       E + 
Sbjct: 297 IEWGNDLGSPDETFLSNQFDKPVFITEYP------------AKCKAFYMQPKEDRPEVVM 344

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             DLL+ + +         EI  G  R H  +++++      +        +       +
Sbjct: 345 CADLLAPEGYG--------EIIGGSQRIHDYDLLIKRLKEENLPL----EMYDWYIDLRK 392

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G  PH G   GI+R V  +   ++VRE   FP +
Sbjct: 393 YGSVPHSGFGLGIERTVAWITNTEHVRECIPFPRT 427


>gi|239636872|ref|ZP_04677871.1| asparaginyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239597546|gb|EEQ80044.1| asparaginyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|330685007|gb|EGG96682.1| asparagine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 430

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 76/322 (23%), Positives = 122/322 (37%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F ++K +  E  
Sbjct: 9   KQHLNQEVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEDVFNLSKEITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++  A + P+     + +       +R 
Sbjct: 69  LYVTGTITEDNRSDL-------GYEMQVKSIEVIHEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II +         F +   PILTAS+PEG  +       ++ +
Sbjct: 119 LWLRSKKQHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDEDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ ++ EM+F E  + L
Sbjct: 179 F--LSQSGQLYMEAA-AMAHGRVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTEHAESL 235

Query: 251 NTMENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDA++     G D  +
Sbjct: 236 EVQEQYVAHVVQSVLKNCQLELKALDRDTSKLEKVAAPFPRITYDDAVKFLKEEGFDDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 296 WGEDFGAPHETAIANHYDLPVF 317



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 66/200 (33%), Gaps = 33/200 (16%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCF--FIAGDPLKFCSFAADARNHIAQELGIINCNC 431
            V K+  +      R    ++   + F      D +KF            ++ G  +   
Sbjct: 248 SVLKNCQLELKALDRDTSKLEKVAAPFPRITYDDAVKFLKEEGFDDIEWGEDFGAPHETA 307

Query: 432 FE-----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM--ESLKGNDLLSIKAFQYDL 484
                    +I ++P                PF M       +++   DL++ + +    
Sbjct: 308 IANHYDLPVFITNYP------------TKIKPFYMQPNPDNEDTVLCADLIAPEGYG--- 352

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
                EI  G  R +  E++ Q  +   +        +       + G  PH G   G++
Sbjct: 353 -----EIIGGSERINDLELLEQRINEHELDP----EAYSYYLDLRRYGSVPHSGFGLGLE 403

Query: 545 RIVMLLLGAKNVREVSLFPM 564
           R V  + G ++VRE S FP 
Sbjct: 404 RTVAWISGVEHVRETSPFPR 423


>gi|225620049|ref|YP_002721306.1| lysyl-tRNA synthetase LysU (class II) [Brachyspira hyodysenteriae
           WA1]
 gi|225214868|gb|ACN83602.1| lysyl-tRNA synthetase LysU (class II) [Brachyspira hyodysenteriae
           WA1]
          Length = 510

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 68/330 (20%), Positives = 133/330 (40%), Gaps = 22/330 (6%)

Query: 4   YRTHSCGD--LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           Y++H   +    +    + V ++G +   R  G   FL I+D  G  Q     D    E 
Sbjct: 51  YKSHEIAEKFEELEKNETEVAIAGRIMLYRVMGKSSFLTIKDAEGTIQAYIQRDKVGDEF 110

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             +V     L   G ++            TG+I + A ++++L+ +   PLP        
Sbjct: 111 YNTVFK--KLIDIGDIVGVKGTVF--KTKTGEITIYANELKLLTKSL-NPLPEKFHGLTD 165

Query: 122 ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
             +R++ R++DL  +  + +  +KR+++I+++R  MI  NF+E  TP++        A+ 
Sbjct: 166 TELRYRQRYVDLIMNDDVKEAFIKRSKMISAIREVMIENNFLEVETPMMHPLIGGAKAKP 225

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+        + Y L  AP+ Y + L+  GFDR F++   FR+E   +   P EF  ++ 
Sbjct: 226 FITHHNTLDMTLY-LRIAPELYLKRLVVGGFDRVFELNRNFRNEGISTRHNP-EFTMMEA 283

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            M++     ++  +E V   V  + +   T       I +     R           + M
Sbjct: 284 YMAYANFHKVMELVEEVFSKVCFKLNGKYTSQYKDYEINFKPPFAR-----------VPM 332

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
            ++ +     +F             +   +
Sbjct: 333 VDLVKEHSGLDFNAIQSDDEALEKAKSVGV 362



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   EEK I               S    D   I   +Y+L   G E+++G    +   
Sbjct: 381 FEEKVEEKLIQPTFVINYPKAVSPLSKSYPDNPDI-TERYELFIGGMEMSNGFSELNDPI 439

Query: 503 VMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F     +K   E+           A + G+PP GG+  GIDR+ +L L   ++R+
Sbjct: 440 DQKERFEEQLKAKARGEDETMDMDLDYINALEYGLPPTGGLGIGIDRMAILFLNVASIRD 499

Query: 559 VSLFPMSQN 567
             LFP  + 
Sbjct: 500 TILFPQMRK 508


>gi|194289271|ref|YP_002005178.1| lysyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|254782472|sp|B3R478|SYK_CUPTR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|193223106|emb|CAQ69111.1| lysine tRNA synthetase, constitutive [Cupriavidus taiwanensis LMG
           19424]
          Length = 517

 Score =  200 bits (508), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 61/284 (21%), Positives = 117/284 (41%), Gaps = 20/284 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F  ++D  G  Q     D    E+  + +   +    G ++S
Sbjct: 76  EVAIAGRMMLKRVMGKASFATVQDGSGQIQFYITRDKVGEEVYAAFKHWDL----GDIIS 131

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTL 138
              E    N   G++ +  +++ +LS +   PLP        + ++++ R++DL      
Sbjct: 132 ARGELFRTN--KGELSVQVRELRLLSKSLR-PLPDKFHGLADQEMKYRQRYVDLIVSPET 188

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
                 RT  I+S+R  M    F+E  TP+L        A+ F+          + L  A
Sbjct: 189 RNTFRARTDAISSLRRHMADAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMF-LRIA 247

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E+++
Sbjct: 248 PELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYTDYRWLMDFTEDLI 306

Query: 258 RGVFEEFSNGN---------TVSNNFLRICYDDAIRRYGTDKPD 292
           R    +               +S  F R+    AI+++     D
Sbjct: 307 RKAAIDARGSAVLTYQDRELDLSKPFHRLTICQAIQKFAPQYTD 350



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 81/239 (33%), Gaps = 36/239 (15%)

Query: 338 RAFCDRMNEWARSQG--QPGLAYIFWRLDESGNVAGMG------PVAKHLNIVNTEAIRV 389
           R   D   +  R       G A + ++  E               + K         +  
Sbjct: 296 RWLMDFTEDLIRKAAIDARGSAVLTYQDRELDLSKPFHRLTICQAIQKFAPQYTDAQLAD 355

Query: 390 RLDMQDGDSCFFIAGDPLKFCSF-AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE 448
              ++     F +  +  +F +      +  + +E        +E  +I+D+P       
Sbjct: 356 AEFLRTELKKFGVNTNAPQFLNAGLGTLQLVLFEE--TAESQLWEPTFIVDYP------- 406

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
                                + +D +     +++L   G EIA+G    + +E     F
Sbjct: 407 --------------VEVSPLARASDTVPGITERFELFITGREIANGFSELNDAEDQADRF 452

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 K+  +           RA + GMPP GG   GIDR+VMLL  + N+R+V LFP
Sbjct: 453 RKQVEQKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVILFP 511


>gi|300711961|ref|YP_003737775.1| aspartyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299125644|gb|ADJ15983.1| aspartyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 432

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 85/348 (24%), Positives = 152/348 (43%), Gaps = 42/348 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++      ++ G    ++GWVH VR  GGI FL +RD  G  Q+    D    EI + 
Sbjct: 4   RTYTA----EAEPGETATVAGWVHEVRDLGGIAFLILRDKSGKIQIKFEKDEMDDEIVET 59

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
              +  E V+ + G V             TG +E++ +++++++ AE   PL   G+ + 
Sbjct: 60  GLDLARESVISVTGAVEEEP------RAPTG-VEITPEELDVIASAEPELPLDPSGKVDA 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
             S R   R LDLR++        R  ++ ++R         E +TP + A+  EG  + 
Sbjct: 113 ELSTRLDNRTLDLRKEETKAIFEIRAEVLRAVRESFREIGCTEINTPKIVATGTEGGTEL 172

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   Q +F    Q+PQ +KQL++ SG +R F+I P FR E+  + R   E   +D E
Sbjct: 173 FPITYFGQEAFMN--QSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATMIDFE 230

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS-------------NGNTVSNNFLRICYDDAIRR-- 285
            +F++ ++ ++  E  L   +E  +             +    +  F R+ Y++AI R  
Sbjct: 231 SAFIDHEEAMDACERTLLAAYEGVAENCEAQLETLGYDDFEVPAEGFPRLTYEEAIERIN 290

Query: 286 ----------YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
                     +G D P      +  +V  H+  +++    K   +   
Sbjct: 291 ATGELDEQLVWGDDLPTEGEKALGDDVGGHYFVTDWPSEIKPFYIQDH 338



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 12/143 (8%)

Query: 433 EFCWIMDFPFYEWNEEEKKI--DFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNG 488
           +  W  D P     E EK +  D   + F              +      +  +DL+   
Sbjct: 298 QLVWGDDLP----TEGEKALGDDVGGHYFVTDWPSEIKPFYIQDHEGGELSKGFDLMHPR 353

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
            E+ SGG R H  + +++ F   G+       +F    + F+ GMPPH G A G++R+VM
Sbjct: 354 MELVSGGQREHRYDHLVEGFEQQGLDP----AQFEYYTKMFKYGMPPHAGWAYGVERLVM 409

Query: 549 LLLGAKNVREVSLFPMSQNFCDL 571
            +L   N+RE  LFP  +     
Sbjct: 410 TMLDLGNIREAVLFPRDRQRLSP 432


>gi|242242735|ref|ZP_04797180.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233871|gb|EES36183.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|319400806|gb|EFV89025.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 430

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 78/322 (24%), Positives = 122/322 (37%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 9   KKHLNQEVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEETFQLAKDITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L I G +   +   +         E+  + IEI+  A + P+     + +       +R 
Sbjct: 69  LYITGTITEDNRSDL-------GYEMQVKSIEIVHEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II +         F +   PILTAS+PEG  +       ++ +
Sbjct: 119 LWLRSKKQHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDEDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 179 F--LSQSGQLYMEAA-AMAHGRVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHAESL 235

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  + +   N   +                  F RI YDDAI      G +  +
Sbjct: 236 EIQEQYVSHIVQSVLNHCQLELKALDRDTTKLEKVATPFPRISYDDAIEFLKKEGFNDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 296 WGEDFGAPHETAIANHYDLPVF 317



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 64/193 (33%), Gaps = 31/193 (16%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE----- 433
           L +   +    +L+            D ++F            ++ G  +          
Sbjct: 255 LELKALDRDTTKLEKVATPFPRISYDDAIEFLKKEGFNDIEWGEDFGAPHETAIANHYDL 314

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM--ESLKGNDLLSIKAFQYDLVCNGFEI 491
             +I ++P                PF M       +++   DL++ + +         EI
Sbjct: 315 PVFITNYP------------TKIKPFYMQPNPDNEDTVLCADLIAPEGYG--------EI 354

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R +  E++ Q  +   +     E  +       + G  PH G   G++R V  + 
Sbjct: 355 IGGSERINDLELLEQRINEHELD----EESYSYYLDLRRYGSVPHSGFGLGLERTVAWIS 410

Query: 552 GAKNVREVSLFPM 564
           G ++VRE S FP 
Sbjct: 411 GVEHVRETSPFPR 423


>gi|217077430|ref|YP_002335148.1| asparaginyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217037285|gb|ACJ75807.1| asparaginyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 431

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 77/318 (24%), Positives = 127/318 (39%), Gaps = 31/318 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFEIAKSVRSEWVLCI 73
           +G  V L GWV R R  G I F+++RD  GI QVV      D   F+ A+ +R E  L +
Sbjct: 12  IGKEVELRGWVWRSRSSGKIAFINMRDGTGIVQVVVEASSVDEETFKNARKLRMESSLIV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V S            G +E+ A+  E++ V          + ++      ++R L L
Sbjct: 72  RGTVKSEER-------APGGVEIHAK--EVIPVQIPTEDFPINKPDHSIDYLMEHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  ++ ++R      +F++  TPI T +  E A +       + G  Y 
Sbjct: 123 RSRRQMHILNIRDAVLRAIRKFYWENDFVQVDTPIFTGAIGESAGNLFEIDYFDYGKVY- 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +        R F + P FR E  ++ R   EF+  + E+++ E +D L   
Sbjct: 182 LAQTGQLYLEAA-CMALGRVFNLGPTFRAEKSKTRRHLIEFWMNEAEVAYFEHEDNLKLQ 240

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           EN++  + +               + S    +   F RI Y +A++       D+     
Sbjct: 241 ENLVSYIVKYVLENAREHLEALNRDISKLEKIEPPFPRITYTEAVKMLQKKGYDIEWGDD 300

Query: 299 M--HNVTEHFVHSEFRVF 314
                 TE     +  VF
Sbjct: 301 FGGDEETEIAKQFDKPVF 318



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 49/143 (34%), Gaps = 7/143 (4%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           ++    ++  W  DF   E  E  K+ D        P+         D  +      D +
Sbjct: 287 MLQKKGYDIEWGDDFGGDEETEIAKQFDKPVFVTHYPRKAKAFYMQPDPDNPDVVLCDDL 346

Query: 486 C---NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
                  EI     R H  +++++      +        +       + G  PH G   G
Sbjct: 347 IAPEGYGEIIGASQRIHDYDLLVERLKEFNLPV----ESYDWYLDLRKFGSVPHSGFGLG 402

Query: 543 IDRIVMLLLGAKNVREVSLFPMS 565
           ++R +  + G +++RE   FP +
Sbjct: 403 VERTIAWIAGLEHIREAIPFPRT 425


>gi|41582254|gb|AAS07872.1| lysyl-tRNA synthetase [uncultured marine bacterium 580]
          Length = 480

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 66/285 (23%), Positives = 117/285 (41%), Gaps = 16/285 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            +   G  V +SG +   R  G   F  I+D+ G  Q+    D    +    + +++   
Sbjct: 33  TLEKKGIEVSVSGRMMLKRVMGKASFASIQDNKGRIQLYVARDFINSDDNPELYAQFKKW 92

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G ++    +       T ++ +   +I +L+ +   PLP        +  +++ R++D
Sbjct: 93  DLGDIVGAKGKLF--KTRTNELTIEVTEIVLLTKSIR-PLPEKFHGLSDQETKYRQRYVD 149

Query: 133 LRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   K     R++II++MR  M    F+E  TP+L        AR F          
Sbjct: 150 LIVNEDTKKTFLNRSKIISNMRAFMEEHEFLEVETPMLHPIPGGATARPFETHHNALDMD 209

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++   ++ E   ++
Sbjct: 210 MY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SVRHNPEFTMMEFYAAYTEYKWLM 267

Query: 251 NTMENVLRGVFEEFSN---------GNTVSNNFLRICYDDAIRRY 286
           N  E+ +R V +                    F R+   +AI +Y
Sbjct: 268 NFTEDCIRDVTKRILGTLKVKYQDKIIDFEKPFERLTLVEAIMKY 312



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E K  D  +      +    + + +D  +    +++L   G EIA+G    + +
Sbjct: 351 LFELEAEAKLWDPTYIIDYPTEVSPLA-RASDTNNAITERFELFIAGREIANGFSELNDA 409

Query: 502 EVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   + F     +K+  +           RA + G+PP GG   GIDR+VMLL  + ++R
Sbjct: 410 EDQAKRFQMQVAAKDAGDEEAMYYDADFVRALEYGLPPTGGCGVGIDRLVMLLTDSPSIR 469

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 470 DVILFPHMR 478


>gi|293606110|ref|ZP_06688475.1| lysine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292815565|gb|EFF74681.1| lysine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 507

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 66/318 (20%), Positives = 134/318 (42%), Gaps = 23/318 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           ++  G  V+++G +   R  G   F  ++D  G  Q+  +  +   +   + +   +   
Sbjct: 60  LAAAGVTVKVAGRMMLKRVMGKASFATLQDSTGRIQIYLDRGTLGEDNYAAFKQWDI--- 116

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +++        N   G++ + A    +LS +   PLP        + +R++ R++DL
Sbjct: 117 -GDIIAIEGSVFKTN--KGELSVHAATARLLSKSLR-PLPDKFHGVADQELRYRQRYVDL 172

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              D   +    R++ + S+R  M+   F+E  TP+L        A+ F+          
Sbjct: 173 IMTDATRRTFEARSKAVGSIRQFMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMEM 232

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ E   +++
Sbjct: 233 Y-LRIAPELYLKRLIVGGFERVFEVNRNFRNEGV-SPRHNPEFTMMEFYAAYAEYRWLMD 290

Query: 252 TMENVLR---------GVFEEFSNGNTVSNNFLRICYDDAIRRY--GTDKPDLRNPI-IM 299
             E ++R          V         +S  F R+   +AI +Y  G  +  L +P+ + 
Sbjct: 291 FTEELIRQAAISATGSAVLTYQERELDLSKPFDRLTICEAILKYAPGYTQAQLDDPVFVR 350

Query: 300 HNVTEHFVHSEFRVFSKI 317
             + +    ++  V S+ 
Sbjct: 351 AELKKLGADADGPVLSRA 368



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/306 (16%), Positives = 97/306 (31%), Gaps = 37/306 (12%)

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
             F+       +  Y    P+L    ++    E          ++ +S     E   +  
Sbjct: 219 KPFVTHHNALDMEMYLRIAPELYLKRLIVGGFERVFEVNRNFRNEGVSPRHNPEFTMMEF 278

Query: 332 KGG-GGNRAFCDRMNEWARSQG--QPGLAYIFWRLDESGNVAGM------GPVAKHLNIV 382
                  R   D   E  R       G A + ++  E               + K+    
Sbjct: 279 YAAYAEYRWLMDFTEELIRQAAISATGSAVLTYQERELDLSKPFDRLTICEAILKYAPGY 338

Query: 383 NTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFP 441
               +   + ++          D P+   +     +  + +E        +   +I+D+P
Sbjct: 339 TQAQLDDPVFVRAELKKLGADADGPVLSRAGLGALQLALFEE--TAEAKLWNPTYIIDYP 396

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
                                       + +D       +++L   G EIA+G    +  
Sbjct: 397 ---------------------VEVSPLARASDTREGITERFELFMTGREIANGFSELNDP 435

Query: 502 EVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   + F +   +K+  +           RA + GMPP GG   GIDR+VMLL  + ++R
Sbjct: 436 EDQAERFRSQVEAKDAGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIR 495

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 496 DVILFP 501


>gi|225849439|ref|YP_002729604.1| lysyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643541|gb|ACN98591.1| lysyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 577

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 72/332 (21%), Positives = 133/332 (40%), Gaps = 21/332 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +  +R  G   F  ++D  G  Q+  N D    E  +       L   G +
Sbjct: 137 GKEVAVAGRLVALRDQGKAAFGHLQDADGKLQIYFNADILGQENYQKAMD---LIDIGDI 193

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    +      +TG++ +     +ILS +   PLP           R++YRFLDL  + 
Sbjct: 194 VGVKGKLF--RTMTGELTVEVHSYQILSKSLR-PLPEKWHGLRDVEERYRYRFLDLIANQ 250

Query: 138 LHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALP 195
             + I K R++ I S+R  + ++ FIE  TPIL   +    A+ F+        + Y L 
Sbjct: 251 RSREIFKLRSKAIKSLREFLESKGFIEVETPILQPVASGALAKPFITYHNALDMNLY-LR 309

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y ++L+  GF+R F+I   FR+E   +   P EF  ++   ++++ +D++   E 
Sbjct: 310 IAPELYLKMLVVGGFNRVFEIGRNFRNEGIDTTHNP-EFTMVEFYAAYLDYNDLMALTEE 368

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           + R +  +      +      I ++   RR           +      +     +   F 
Sbjct: 369 LFRKILLDTVGTLKIKWEDQEIDFEKPFRR-----------LPFFEALKQKTGKDKEFFL 417

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
                    +   IP      +    D++ E 
Sbjct: 418 DYEKAKNFAKEVGIPKADTLTHMKILDKLFEH 449



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 6/148 (4%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            A+E+GI   +      I+D  F  + EE+         F      +     ND   +  
Sbjct: 425 FAKEVGIPKADTLTHMKILDKLFEHFVEEDLVQPTFVIDFPKILSPLAKTHRNDPDLV-- 482

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAF----SNVGISKEVVENRFGGLYRAFQCGMPP 535
            +++L+ N  E+A+     +      + F        +  E   +       A + G+PP
Sbjct: 483 ERFELIINKQELANAYTELNDPFDQRERFIQQIREKEMGDEEAMDVDETFLTALEYGLPP 542

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             G   GIDR+VM+L  + ++REV LFP
Sbjct: 543 TAGEGIGIDRLVMMLTDSVSIREVILFP 570


>gi|320528945|ref|ZP_08030037.1| lysyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320138575|gb|EFW30465.1| lysyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 503

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 62/287 (21%), Positives = 117/287 (40%), Gaps = 18/287 (6%)

Query: 2   HRYR-THSCGDLGVS-------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           HR+  T    ++          + G  V ++G +  +R HG   F  + D  G  Q+   
Sbjct: 40  HRFEVTDYAAEIRAQYDHLDEDEEGGEVCIAGRLMAIRGHGKASFSTLNDRTGNIQIYFK 99

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D    +  K    E+     G ++      +      G++ +  +  ++LS +   PLP
Sbjct: 100 QDVLGEKKYKE---EFKRLDIGDIIGIRG--VVFKTRRGEVTVRVEDFDLLSKSLR-PLP 153

Query: 114 VFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TA 171
                      R++ R+LDL  +  +     KR +II S+R  +   +F+E  TP+L T 
Sbjct: 154 EKFHGLKDVDTRYRQRYLDLMVNYEVRDTFRKRAKIIRSIRSYLDERDFLEVETPVLSTI 213

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F+          Y L  A +   + L+  G DR +++   FR+E       P
Sbjct: 214 AGGAAARPFITHHNALDIDLY-LRIATELSLKRLIVGGLDRVYEMGRIFRNEGMDVRHNP 272

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
            EF  +++  +F +  D++   E ++R   E+      ++   + I 
Sbjct: 273 -EFTSIEIYQAFGDYRDLMEITEGIVRRTAEDVLGTTKITYQGVEID 318



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 7/176 (3%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
             D+     G     C+   +AR  +A+E+G+          I++  F E  EE   +  
Sbjct: 327 MNDAVCEATGRDFLSCTTVDEAR-AMAKEIGVPFEERHGIGGILNAAFEEKVEET--LIQ 383

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
                  P       K N        +++    G E+A+G    +      Q F +    
Sbjct: 384 PTFITGHPTEISPLAKRNPDDPRITDRFEFFVYGRELANGFTELNDPIDQEQRFIDQLAQ 443

Query: 515 KEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +E  +            A + G+PP GG+  GIDR+VMLL  + ++R+V LFP  +
Sbjct: 444 REAGDAEAHVMDRDYVTALEYGLPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPTMK 499


>gi|194467683|ref|ZP_03073670.1| lysyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454719|gb|EDX43616.1| lysyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 508

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 77/311 (24%), Positives = 127/311 (40%), Gaps = 31/311 (9%)

Query: 4   YRTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
            R H   DL           ++++G+ V ++G + R R  G   F D  D  G  QV A 
Sbjct: 31  KRDHLAQDLHDKFDQYDKEELNEMGAKVIIAGRMTRKRSSGKAGFADFVDRTGKIQVYAR 90

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D    E     +   +    G  +    + I     TG++ + A KI  LS A   PLP
Sbjct: 91  KDMVGDEPYHVFKRSDI----GDFLGIEGDVI--KTDTGELTVRAHKITFLSKALR-PLP 143

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TA 171
              +        ++ R+LDL  +    K   +RT II ++R  M    F E  TPIL T 
Sbjct: 144 NKWDGVTDPETIYRQRYLDLISNPESFKRFHQRTAIIKAVRKYMDDNGFTEVETPILNTQ 203

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F+          Y L  A + Y + L+  GF+R +++   FR+E        
Sbjct: 204 AGGANARPFITHHNALDIDMY-LRIATELYLKRLIVGGFERVYELGRIFRNEGMD-PHHN 261

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDA 282
            EF  ++   ++ +  D+++  E +++   +  S+   ++           F RI   DA
Sbjct: 262 PEFTTMETYAAYFDFQDVMDETEGIVKAAAKVVSDDGKITYQGNEIDLGGNFKRITMVDA 321

Query: 283 IRRY-GTDKPD 292
           ++   G D  D
Sbjct: 322 VKEKTGIDFSD 332



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 10/154 (6%)

Query: 421 AQELGIINCNCFEFCW----IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           A++L   +   ++  W    I++  F E+ E+   +      +  P       K N    
Sbjct: 340 AKKLADEHKVEYKPYWTKGHILNAFFEEFVEDT--LIQPTFVYEFPVEVSPLAKRNADNP 397

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCG 532
               +++L  +G E+A+     +      + F      K    +  E       +A + G
Sbjct: 398 AMTDRFELYVDGSELANAFSELNDPIDQKERFEMQAKEKANGNDEAEPVDLDYVQALEYG 457

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP GG+  GIDR+VMLL  AK++R+V LFP  +
Sbjct: 458 MPPTGGLGIGIDRLVMLLTDAKSIRDVILFPTMR 491


>gi|227533061|ref|ZP_03963110.1| Lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227189312|gb|EEI69379.1| Lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 508

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 77/335 (22%), Positives = 136/335 (40%), Gaps = 33/335 (9%)

Query: 2   HRY-RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH+   +             D    V ++G +   R  G + F DIRD  G  Q+
Sbjct: 45  HRFDRTHTAAKVREEFGEDDKETLLDEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 104

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    +     +   +    G ++  S E +     +G++ + A  +  L+ A   
Sbjct: 105 YVRKDVVGDDNYMIFKKADL----GDILGISGEVM--KTDSGELTVKANHVTHLAKALR- 157

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           +++ R+LDL  +       VKRT+I++++R  +    F+E  TP+L
Sbjct: 158 PLPDKWHGLTDVEQKYRKRYLDLISNEDSFDRFVKRTKIVSAVREYLDNNGFLEVETPVL 217

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + L+  G +R ++I   FR+E   + 
Sbjct: 218 HNQAGGANARPFVTHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTK 276

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICY 279
             P EF +L+   ++ +  D++   E + R    +  +   ++           F RI  
Sbjct: 277 HNP-EFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLTYQGMAIDLDAPFARINM 335

Query: 280 DDAIRRY-GTD-KPDLRNPIIMHNVTEHFVHSEFR 312
            DAI+   G D  P++          EH VH E  
Sbjct: 336 LDAIKDKTGVDFWPEMSVDDARKLADEHDVHYEPY 370



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K N        +++L   G E A+     +      Q F      K    +   G     
Sbjct: 407 KKNPKDPRFVERFELFVGGGEYANAFTELNDPIDQRQRFEAQAAEKSAGNDEAQGIDDDY 466

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 467 VEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 504


>gi|319943697|ref|ZP_08017978.1| lysine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319742930|gb|EFV95336.1| lysine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 513

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 66/304 (21%), Positives = 122/304 (40%), Gaps = 30/304 (9%)

Query: 9   CGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
            G L  +  G            V ++G +   R  G   F  ++D  G  Q+  N D   
Sbjct: 55  AGALLAAHDGKTREELEAENISVSVAGRMVLKRVQGKASFATLQDATGRIQLWMNDDGVG 114

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E   + +   +  I       +AE        G++ +    + +L+ +   PLP     
Sbjct: 115 AEAHDAFKHWDLGDI------VAAEGTLFKTKKGELSIRCNMVRLLTKSLR-PLPDKFHG 167

Query: 119 EYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
              + +R++ R++DL  +   +   + R++ I ++R  M+    +E  TP+L        
Sbjct: 168 LADQEMRYRQRYVDLMSNESTRQTFIIRSKAIAAIRQFMVDNGCLEVETPMLQPIPGGAT 227

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F         + + L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  
Sbjct: 228 ARPFQTHHNALDQAMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGL-SPRHNPEFTM 285

Query: 237 LDMEMSFVEQDDILNTMENVLRG---------VFEEFSNGNTVSNNFLRICYDDAIRRYG 287
           ++   ++ +   +++  E V+R          V E       +S  F R+   +AIR + 
Sbjct: 286 MEFYAAYTDCRWMMDYTEQVIRHAAQAARGSTVLEYQGRPVDLSKPFARLTIVEAIRTHA 345

Query: 288 TDKP 291
            + P
Sbjct: 346 PELP 349



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 92/300 (30%), Gaps = 33/300 (11%)

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           F           +    P+L    ++    E          ++ LS     E   +    
Sbjct: 231 FQTHHNALDQAMFLRIAPELYLKRLIVGGFERVFEINRNFRNEGLSPRHNPEFTMMEFYA 290

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
              +  +     E                  +   V    P A+   +         L  
Sbjct: 291 AYTDCRWMMDYTEQVIRHAAQAARGSTVLEYQGRPVDLSKPFARLTIVEAIRTHAPELPA 350

Query: 394 QDGDSCFFIAGDPLK------FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNE 447
           +  D   ++  +  K        +     +  + +E  +     ++  +I+D+P      
Sbjct: 351 EKLDDAAWLRAELAKHGVEPPANAGVGALQLALFEE--VAESKLWDPTFIIDYP------ 402

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
                                 + +D       +++L   G E A+G    +  E   + 
Sbjct: 403 ---------------AEVSPLARSSDHDPEITERFELFMTGREFANGFSELNDPEDQAER 447

Query: 508 FSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           F     +KE  ++          RA + GMPP GG+  GIDR++MLL  +  +R+V LFP
Sbjct: 448 FRKQVEAKEAGDDEAMYYDADYIRALEYGMPPTGGVGIGIDRLMMLLTDSPTIRDVILFP 507


>gi|314933638|ref|ZP_07841003.1| asparagine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653788|gb|EFS17545.1| asparagine--tRNA ligase [Staphylococcus caprae C87]
          Length = 430

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 78/322 (24%), Positives = 121/322 (37%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 9   KQHLNQEVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEETFQLAKEITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++  A + P+     + +       +R 
Sbjct: 69  LYVTGTITEDNRSDL-------GYEMQVKSIEVIHEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II +         F +   PILTAS+PEG  +       +Q +
Sbjct: 119 LWLRSKKQHAVMKIRNEIIRATYEFFNDNGFTKIDPPILTASAPEGTSELFHTKYFDQDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 179 F--LSQSGQLYMEAA-AMADGRVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHAESL 235

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDAI      G D  +
Sbjct: 236 EVQEQYVTHVVQSVLKNCELELKALDRDTTKLEKVATPFPRISYDDAIEFLKEQGFDDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 296 WGEDFGAPHETAIANHYDLPVF 317



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 66/200 (33%), Gaps = 33/200 (16%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCF--FIAGDPLKFCSFAADARNHIAQELGIINCNC 431
            V K+  +      R    ++   + F      D ++F            ++ G  +   
Sbjct: 248 SVLKNCELELKALDRDTTKLEKVATPFPRISYDDAIEFLKEQGFDDIEWGEDFGAPHETA 307

Query: 432 FE-----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM--ESLKGNDLLSIKAFQYDL 484
                    +I ++P                PF M       +++   DL++ + +    
Sbjct: 308 IANHYDLPVFITNYP------------TQIKPFYMQPNPDNEDTVLCADLIAPEGYG--- 352

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
                EI  G  R +  +++ Q      +     E  +       + G  PH G   G++
Sbjct: 353 -----EIIGGSERINDLDLLEQRIKEHELD----EESYSYYLDLRRYGSVPHSGFGLGLE 403

Query: 545 RIVMLLLGAKNVREVSLFPM 564
           R V  + G ++VRE S FP 
Sbjct: 404 RTVAWISGVEHVRETSPFPR 423


>gi|15614259|ref|NP_242562.1| asparaginyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|20139934|sp|Q9KC78|SYN_BACHD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|10174313|dbj|BAB05415.1| asparaginyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 430

 Score =  200 bits (508), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 82/321 (25%), Positives = 126/321 (39%), Gaps = 34/321 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVL 71
             V   V L  W+   R  G I FL +RD  G  Q   V A      F+ AK++  E  L
Sbjct: 10  QYVDQEVTLGAWLANKRSSGKIAFLQLRDGTGFIQGVVVKAEVGDEWFQKAKNLTQESSL 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G+V                 EL+    +I+  A + P+     +E+       +R L
Sbjct: 70  YVTGIVRKDER-------APSGYELTVTSFDIIHEATDYPITP---KEHGTEFLMDHRHL 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R    H  +  R  II +         F++   PILT S+PEG  +       ++ +F
Sbjct: 120 WIRSRKQHAVLRIRNEIIRATYEFFHENGFVKVDPPILTGSAPEGTTELFHTKYFDEDAF 179

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A  F R F   P FR E  ++ R   EF+ ++ EM+FVE ++ L 
Sbjct: 180 --LSQSGQLYMEAA-ALAFGRVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEFEESLE 236

Query: 252 TMENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRY---GTDKPDL 293
             EN +  + +       +                  F RI YDDAI+     G D  + 
Sbjct: 237 IQENYVAYIVQSVLKHCAIELKTLGRDTSVLESIQAPFPRISYDDAIKFLHEKGFDDIEW 296

Query: 294 RNPIIMHNVTEHFVHSEFRVF 314
            +     + T    H +  VF
Sbjct: 297 GDDFGAPHETAIAEHFDKPVF 317



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 31/171 (18%)

Query: 401 FIAGDPLKFCSFAADARNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
               D +KF             + G      I  +  +  +I  +P             +
Sbjct: 277 ISYDDAIKFLHEKGFDDIEWGDDFGAPHETAIAEHFDKPVFITHYP------------TS 324

Query: 456 HNPFTMPQGG--MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
             PF M       + +   DL++ + +         EI  G  R    +++ +      +
Sbjct: 325 LKPFYMEPDPNRDDVVLCADLIAPEGYG--------EIIGGSQRISDYDLLKKRLEEHDL 376

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           S     + +       + G  PH G   G++R V  + GA +VRE   FP 
Sbjct: 377 SL----DAYAWYLDLRKYGSVPHSGFGLGLERTVGWISGAGHVRETIPFPR 423


>gi|55378426|ref|YP_136276.1| aspartyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|62287529|sp|Q5V1N2|SYD_HALMA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|55231151|gb|AAV46570.1| aspartyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 434

 Score =  200 bits (508), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 85/349 (24%), Positives = 154/349 (44%), Gaps = 43/349 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++      +  G  V ++GWVH +R  GGI FL +RD  G  QV    D    ++ ++
Sbjct: 4   RTYTAD----ATPGDTVTVAGWVHEIRDLGGIAFLILRDTTGKIQVKFEKDEMDDDLVET 59

Query: 65  ---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
              V+ E V+ + G V             TG +E++ + ++++S A+   PL   G+ + 
Sbjct: 60  GLNVQRESVISVTGAVEEEP------RAPTG-VEVTPESVDVISEADPELPLDPSGKVDA 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   R LDLR+D +      R  ++ S+R      N  E +TP + A+  EG  + 
Sbjct: 113 ELPTRLDNRTLDLRKDEVKAIFEIRAEVLRSVREAFRELNCTEINTPKIVATGTEGGTEL 172

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   Q +F    Q+PQ +KQL++ SG +R F+I P FR E+  + R   E   +D E
Sbjct: 173 FPITYFGQEAFMN--QSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFE 230

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT--------------VSNNFLRICYDDAIRR- 285
            +F +  + ++  E+V++  +E  +                     +F R+ Y++A+ + 
Sbjct: 231 SAFYDHTEAMDACEHVVQSAYEGVAENCQDQLEALGLEDEFAAPEGDFPRLTYEEALDKI 290

Query: 286 -----------YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
                      +G D       ++   V EH+  +++    K   +   
Sbjct: 291 NATGELDEPLVWGDDLSTEAEHVLGQEVGEHYFITDWPSEIKPFYIKDH 339



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 70/196 (35%), Gaps = 31/196 (15%)

Query: 383 NTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA--RNHIAQELGIINCNCF-----EFC 435
               +       +GD       + L   +   +         +L     +       E  
Sbjct: 263 EALGLEDEFAAPEGDFPRLTYEEALDKINATGELDEPLVWGDDLSTEAEHVLGQEVGEHY 322

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           +I D+P                PF         +K +D     +  +D++    E+ SGG
Sbjct: 323 FITDWP------------SEIKPFY--------IKDHDDDEEVSTGFDMMHPSMELVSGG 362

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            R H  + +++ F   G+        F    + F+ GMPPH G   G +R++M +LG +N
Sbjct: 363 QREHRFDHLVEGFEQQGLDP----EAFEYYTKMFKYGMPPHAGWGLGGERLIMTMLGLEN 418

Query: 556 VREVSLFPMSQNFCDL 571
           +RE  LFP  +     
Sbjct: 419 IREAVLFPRDRQRLSP 434


>gi|317968463|ref|ZP_07969853.1| lysyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 499

 Score =  200 bits (508), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 56/294 (19%), Positives = 116/294 (39%), Gaps = 19/294 (6%)

Query: 6   THSCGDLGVSDV----GSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           +H   +L  +      G      V ++G V   R  G + F  + D  G  Q+     + 
Sbjct: 30  SHRTAELQQAHADLPNGEERDVSVSVAGRVMTRRVMGKLAFFTLADETGPIQLFIEKAT- 88

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
              + ++      L   G ++         +   G++ +  +  ++LS + + PLP    
Sbjct: 89  ---LEEAFGHLTSLVDAGDLIGVKGSLRRTD--RGELSVKVKSWQMLSKSLQ-PLPDKWH 142

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRI-INSMRCRMIAENFIECSTPILTA-SSPE 175
                  R++ R+LDL      +   +R  I ++S+R  +    F+E  TP+L +     
Sbjct: 143 GLADVEKRYRQRYLDLIVSPDTRETFRRRAIAVSSIRRWLDERGFLEIETPVLQSVPGGA 202

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F             L  A + + + L+  GF+R +++   FR+E   +   P EF 
Sbjct: 203 DARPFETHHNALDLPL-TLRIATELHLKRLVVGGFERVYELGRIFRNEGISTRHNP-EFT 260

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            +++  ++ + +D+++  E ++  V ++      +S     I      RR    
Sbjct: 261 SIEVYQAYADYNDMMDLTEQLIAHVCQQVCGTTRISYQGTEIDLTPPWRRATMH 314



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 49/135 (36%), Gaps = 25/135 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +++D+P      E   +  AH                        +++L   G E A
Sbjct: 370 QPTFVIDYPV-----ENSPLARAHR----------------SKPGLVERFELFIVGRETA 408

Query: 493 SGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +            Q        K    +  +        A + GMPP GG+  GIDR+VM
Sbjct: 409 NAFSELIDPVDQRQRLEAQMARKAAGDDEAQEVDEDFINALEVGMPPTGGLGIGIDRLVM 468

Query: 549 LLLGAKNVREVSLFP 563
           LL  + ++R+V  FP
Sbjct: 469 LLTDSPSIRDVIAFP 483


>gi|229824567|ref|ZP_04450636.1| hypothetical protein GCWU000282_01911 [Catonella morbi ATCC 51271]
 gi|229785938|gb|EEP22052.1| hypothetical protein GCWU000282_01911 [Catonella morbi ATCC 51271]
          Length = 502

 Score =  200 bits (508), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 61/300 (20%), Positives = 123/300 (41%), Gaps = 16/300 (5%)

Query: 7   HSCGDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           H+  ++    +      VR++G +   R  G   F  + D  G  Q+    DS   E  +
Sbjct: 49  HAYSEIDKEALEEKKIPVRVAGRMVSKRGKGKAGFAHLLDMDGKIQIYVRQDSVGEESYQ 108

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             ++  +  I G+V             TG++ + AQ+   L+ A   PLP          
Sbjct: 109 WFKAADLGDIVGVV------GYVFKTNTGELSVFAQEFHPLTKALR-PLPDKYHGLTNVE 161

Query: 124 IRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFL 181
            R++ R+LDL  +   +   + R++I+  +R  +  + ++E  TP+L   +    AR F+
Sbjct: 162 QRYRQRYLDLISNEESRERFILRSKIVREIRRFLDDQGYLEVETPVLHTIAGGATARPFV 221

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  A + + + L+  G ++ +++   FR+E   +   P EF  ++   
Sbjct: 222 THHNALDMELY-LRIATELHLKRLVVGGIEKVYELGRIFRNEGIDTTHNP-EFTTIECYT 279

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++    D+++ +E +L+ V E   N  ++  +   I       R      DL   +   +
Sbjct: 280 AYQVYTDVMDLIEGMLKNVAERVLNKTSLEYHGHTIELGQPWAR--RHMVDLIKEVTGVD 337



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 5/130 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E + E+K I          +    + K  +       +++L   G E A+        
Sbjct: 372 FFEEHCEDKCIQPTFVYGHPVEVSPLARKNEE-DPRFTDRFELFIVGKEYANAFTELSDP 430

Query: 502 EVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               Q F      K       +        A + GMPP GG   GIDR+VML  GA  +R
Sbjct: 431 IDQRQRFEAQMEEKNKGNDEAQPMDDEFIEALEYGMPPTGGWGLGIDRLVMLFTGATAIR 490

Query: 558 EVSLFPMSQN 567
           +V LFP  ++
Sbjct: 491 DVLLFPTMRH 500


>gi|322385813|ref|ZP_08059456.1| lysine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321270098|gb|EFX53015.1| lysine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 496

 Score =  199 bits (507), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 64/347 (18%), Positives = 131/347 (37%), Gaps = 19/347 (5%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   S  +L   ++     ++G +   R  G + F  I+D  G  Q+    D    E 
Sbjct: 46  EKYSDKSKEELH--ELNEKATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDEVGEEN 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +   +    G  +    + +  ++  G++ + A  I  LS A   PLP        
Sbjct: 104 YEIFKKADL----GDFLGIEGDVMRTDM--GELSIKATHITHLSKALR-PLPEKFHGLTD 156

Query: 122 ESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A   
Sbjct: 157 VETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAARP 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++ 
Sbjct: 217 FITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVY 275

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ +  DI++  E +++   +       V+     I  ++  +R             + 
Sbjct: 276 QAYADFQDIMDLTEGIIQHAAKAVKGDGPVNYQGTEIKINEPFKRVHMVDA-------IK 328

Query: 301 NVTEHFVHSEFRV-FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
            +T      +     +  L+      V     + G    AF +   E
Sbjct: 329 EITGVDFWQDMSFEEAAALAKEKKVPVEKHYTEVGHIINAFFEEFVE 375



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K N        +++L     E A+     +     L  F     +KE+ ++   G     
Sbjct: 396 KKNPEDPRFTDRFELFIMTKEYANAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDY 455

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+VMLL     +R+V LFP  +
Sbjct: 456 VEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVLLFPTMK 496


>gi|296314356|ref|ZP_06864297.1| lysine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296838911|gb|EFH22849.1| lysine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 503

 Score =  199 bits (507), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 129/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++G  ++      V+++G +   R  G   F  I+D  G  Q+  N      EI     
Sbjct: 54  GEIGKEELDPQDIPVKIAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQEILDDFN 113

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE        G++ +    I +LS +   PLP   +    +  ++
Sbjct: 114 HWDLGDIVG------AEGTLFKTNHGELTVRVSGIRLLSKSLR-PLPDKHKGLSDQETKY 166

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   +N  +KR++II S+R  M+ E+++E  TP++        A+ F+   
Sbjct: 167 RQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHH 226

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 227 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFS 284

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+++R      +    ++ N         F R+   +AI++Y     D
Sbjct: 285 DYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKYNPHYTD 341



 Score =  100 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 377 GCAEGKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 415

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F      K+  ++          RA + G+PP GG  
Sbjct: 416 FVVGRELANGYSELNDPEDQAERFKTQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 476 IGIDRLVMLLTDSQTIRDVILFPQMR 501


>gi|311064831|ref|YP_003971557.1| lysyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|310867151|gb|ADP36520.1| LysS Lysyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 533

 Score =  199 bits (507), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 106/585 (18%), Positives = 199/585 (34%), Gaps = 135/585 (23%)

Query: 1   MHRYRTH-----SCGDLGVSDVGS---------FVRLSGWVHRVRPHGGIIFLDIR--DH 44
           M  Y  H     +   +     G           V ++G V  +R  GG+ F+ +   D 
Sbjct: 54  MQPYPVHLDVTDTIEAVRAKYDGKLEAGQETEDVVGIAGRVLFLRNGGGLCFVQLSAGDG 113

Query: 45  YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL 104
             I  +++  +      A S++    L   G  +      I +   TG++ + A +  I 
Sbjct: 114 TKIQGMISKKEIG----ADSLKQFKQLVDLGDHLYLRGRVIASK--TGELSVFATEWAIA 167

Query: 105 SVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIE 163
           S A +    +   ++  +  R +  ++ +  D   +N+V+ R++ + S+R      +F+E
Sbjct: 168 SKALQPLPAL--HKDLNDDTRTRKPYIGMIADEKVRNMVRNRSKAVASLRRTFDDHDFLE 225

Query: 164 CSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
             TP+L T      AR F           Y L  AP+ + +  +  G DR F+I   FR+
Sbjct: 226 VETPMLQTIHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVGGIDRVFEINRDFRN 284

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           E   +   P EF  ++   ++       +T+  +++ + ++                  A
Sbjct: 285 EGVDATHAP-EFTMVEAYQAYGT----YDTIGQLVKELVQK-----------------TA 322

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +  +G+ K      + + + TE+    +++  S   S++       +P  G        +
Sbjct: 323 MDVFGSHK------VTLLDGTEYDFGGDWKTISMYDSLSEALGEEIVPNGGPDNPGTSVE 376

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            + E A   G            E  +V   G + +HL                       
Sbjct: 377 HLGEIADKLG-----------VERDDVENHGKLVEHLWEH-------------------- 405

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
                                        +E  ++ DFP      E   +   H      
Sbjct: 406 -----------------------FYEDKLYEPTFVRDFPV-----ETSPLVKGHR----- 432

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
                        +    ++DL   GFE+A+G    +   V  + F          +   
Sbjct: 433 -----------NKAGVVEKWDLYVRGFELATGYSELNDPIVQRERFVAQAKDALAGDEEA 481

Query: 523 ----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                    A   GMPP GG+  GIDR+++ L GA  +RE   FP
Sbjct: 482 CDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETITFP 525


>gi|315925854|ref|ZP_07922060.1| lysine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315620818|gb|EFV00793.1| lysine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 491

 Score =  199 bits (507), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 68/322 (21%), Positives = 133/322 (41%), Gaps = 20/322 (6%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-FEI 61
           T +  +L     +  G  V L+G +   R  G + F D+ D  G  Q+    D    ++ 
Sbjct: 39  TDTAAELTDNFEAHEGQNVSLAGRIMAKRGQGKVGFYDLLDSSGRIQLFLKKDLLPDYDQ 98

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K V    ++ I G +              GQI +      +LS + +  LP        
Sbjct: 99  IKKVDIGDIVGIKGELFKTQR---------GQISVRVNAFTLLSKSLQ-VLPEKYHGLKD 148

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
             IR++ R++DL  +   ++  V R++II  +R  +    F+E  TP+L   +    AR 
Sbjct: 149 TDIRYRERYVDLIVNPEVRDVFVIRSKIITEIRRFLDGRGFLEVETPVLNNLAGGANARP 208

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A +   + L+  GFD+ ++++  FR+E       P EF +L+ 
Sbjct: 209 FVTHHNTLDIPMY-LRIALELPLKRLIVGGFDKVYELSRVFRNEGMDPTHNP-EFTELET 266

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  D++N +E++   + ++      V+ +   I   +  RR      D+   +  
Sbjct: 267 YEAYADYVDVMNMVEDLYHHLADKILGTTDVAYDGQVIHLGEPFRRARMV--DIVKEVTG 324

Query: 300 HNVTEHFVHSEFRVFSKILSVN 321
            +       +E +  ++ L V+
Sbjct: 325 VDFDGMTDPAEAKAAAEGLEVD 346



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 7/129 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMS 501
           ++   E++ I       TM       L   D    +   +++L  +G E A+     +  
Sbjct: 361 FDETCEDQLIQPTF--VTMHPVETSPLAKKDPADPRYTQRFELYIDGAECANAFSELNDP 418

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F      K   ++          +A + G+PP GG+  GIDR+VML  G +++R
Sbjct: 419 ADQKARFEAQMARKADGDDEAHPYDADFIKALEVGLPPTGGLGIGIDRLVMLFTGQRSIR 478

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 479 DVILFPTMK 487


>gi|110667239|ref|YP_657050.1| aspartyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|121692429|sp|Q18KP5|SYD_HALWD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|109624986|emb|CAJ51399.1| aspartate--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 434

 Score =  199 bits (507), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 39/336 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK---SVRSEWVLCID 74
           G  + ++GWVH +R  GGI FL +RD  G  Q+    D    EI +    V  E V+ I 
Sbjct: 13  GDEITVAGWVHEIRDLGGIAFLILRDRSGKIQIKFEKDEMNDEIVQTGLDVPRESVISIT 72

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDL 133
           G+                 +E+    IE+LS A+   PL   G+     S R   R LDL
Sbjct: 73  GVADDEPR-------APTDVEIVPTAIEVLSSADTELPLDPSGKVNADLSTRLDNRTLDL 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R+  +      R+ ++ + R         E +TP + A+  EG  +    +   + +F  
Sbjct: 126 RKKEVKAVFQIRSEVLRAARDAFRELGCTEINTPKIVATGTEGGTELFPITYFGEEAFMN 185

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
             Q+PQ +KQL++ SG +R F+I P FR E+  + R   E   +D E +F+   + ++  
Sbjct: 186 --QSPQLFKQLMIGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFESAFINHAEAMDAC 243

Query: 254 ENVLRGVFEEFSNGNTVS--------------NNFLRICYDDAIRR------------YG 287
           E V+   ++  +                     +F RI Y +AI R            +G
Sbjct: 244 EYVVTAAYQGVAENCITELETLGLRDGFSVPDESFPRISYQEAIERINATGELDEQLVWG 303

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
            D P      +  +V  H+  +++    K   +   
Sbjct: 304 DDLPTDGERALGADVGSHYFITDWPSEIKPFYIKDH 339



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              +I D+P                PF         +K +D     +  +D++    E+ 
Sbjct: 320 SHYFITDWP------------SEIKPFY--------IKDHDDDKTLSTGFDMMHPQMELV 359

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SGG R H  E ++  F   G+       +F    + F+ GMPPH G   G +R+VM +LG
Sbjct: 360 SGGQREHRYEHLVSGFEQQGLDP----EQFDYYTKMFRYGMPPHAGWGLGGERLVMTMLG 415

Query: 553 AKNVREVSLFPMSQNFCDL 571
            +N+RE  LFP  +     
Sbjct: 416 LENIREAVLFPRDRQRLSP 434


>gi|148543508|ref|YP_001270878.1| lysyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184152915|ref|YP_001841256.1| lysyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227363657|ref|ZP_03847771.1| lysine--tRNA ligase [Lactobacillus reuteri MM2-3]
 gi|325681852|ref|ZP_08161371.1| lysine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|148530542|gb|ABQ82541.1| lysyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224259|dbj|BAG24776.1| lysyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071326|gb|EEI09635.1| lysine--tRNA ligase [Lactobacillus reuteri MM2-3]
 gi|324978943|gb|EGC15891.1| lysine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 508

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 77/311 (24%), Positives = 127/311 (40%), Gaps = 31/311 (9%)

Query: 4   YRTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
            R H   DL           ++++G+ V ++G + R R  G   F D  D  G  QV A 
Sbjct: 31  KRDHLAQDLHDKFDQYDKEELNEMGAKVIIAGRMTRKRSSGKAGFADFVDRTGKIQVYAR 90

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D    E     +   +    G  +    + I     TG++ + A KI  LS A   PLP
Sbjct: 91  KDMVGDEPYHVFKRSDI----GDFLGIEGDVI--KTDTGELTVRAHKITFLSKALR-PLP 143

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TA 171
              +        ++ R+LDL  +    K   +RT II ++R  M    F E  TPIL T 
Sbjct: 144 NKWDGVTDPETIYRQRYLDLISNPESFKRFHQRTAIIKAVRKYMDDNGFTEVETPILNTQ 203

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F+          Y L  A + Y + L+  GF+R +++   FR+E        
Sbjct: 204 AGGANARPFITHHNALDIDMY-LRIATELYLKRLIVGGFERVYELGRIFRNEGMD-PHHN 261

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDA 282
            EF  ++   ++ +  D+++  E +++   +  S+   ++           F RI   DA
Sbjct: 262 PEFTTMETYAAYFDFQDVMDETEGIVKAAAKVVSDDGKITYQGHEIDLGGNFKRITMVDA 321

Query: 283 IRRY-GTDKPD 292
           ++   G D  D
Sbjct: 322 VKEKTGIDFSD 332



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 10/154 (6%)

Query: 421 AQELGIINCNCFEFCW----IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           A++L   +   ++  W    I++  F E+ E+   +      +  P       K N    
Sbjct: 340 AKKLADEHKVEYKPYWTKGHILNAFFEEFVEDT--LIQPTFVYEFPVEVSPLAKRNADNP 397

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCG 532
               +++L  +G E+A+     +      + F      K    +  E       +A + G
Sbjct: 398 AMTDRFELYVDGSELANAFSELNDPIDQKERFEMQAKEKANGNDEAEPVDLDYVQALEYG 457

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP GG+  GIDR+VMLL  AK++R+V LFP  +
Sbjct: 458 MPPTGGLGIGIDRLVMLLTDAKSIRDVILFPTMR 491


>gi|226312103|ref|YP_002771997.1| asparaginyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226095051|dbj|BAH43493.1| asparaginyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 429

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 79/320 (24%), Positives = 126/320 (39%), Gaps = 33/320 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVL 71
             VG  VRL  W++  R  G I FL +RD  G  Q   V A      +E A  +  E  L
Sbjct: 10  QHVGQEVRLGCWLYNKRSSGKIQFLQLRDGSGFIQGVVVKAEVAEEVWENASQLTQESSL 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G V +               EL+   +EI+ +A+E P      +E+       +R L
Sbjct: 70  YITGSVRADDR-------APSGYELTVTGVEIIQIAQEYP---ISLKEHGVDFLMDHRHL 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR       +  R+ +I +M        F++   PILT +S EG  +       ++ ++
Sbjct: 120 WLRSPRQRAVMAVRSEVIRAMYEFFHENGFVKVDPPILTPTSAEGTTNLFHTKYFDEDAY 179

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    R +   P FR E  ++ R   EF+ ++ EM+FV+ ++ L 
Sbjct: 180 --LSQSGQLYMEAA-AMALGRVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVDHEENLR 236

Query: 252 TMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRYGTDKPDLRNP 296
             E  +  V +                         +F RI YDDAI+       +++  
Sbjct: 237 IQEAFVSHVVQSVLKNCERELKTLERDTTKLQNVTGSFPRISYDDAIKLLQEKGSEIKWG 296

Query: 297 IIMH--NVTEHFVHSEFRVF 314
                 + T    H +  VF
Sbjct: 297 DDFGAPDETMIADHFDKPVF 316



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 70/212 (33%), Gaps = 30/212 (14%)

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD--GDSCFFIAGDPLKFCSFAADARN 418
            R+ E+     +  V K+         R    +Q+  G        D +K          
Sbjct: 235 LRIQEAFVSHVVQSVLKNCERELKTLERDTTKLQNVTGSFPRISYDDAIKLLQEKGS-EI 293

Query: 419 HIAQELGIINC----NCF-EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
               + G  +     + F +  +I  +P      E K      +P        E +   D
Sbjct: 294 KWGDDFGAPDETMIADHFDKPVFITHYP-----TEIKAFYMKPHP-----ERPEVVLCAD 343

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           +++ + +         EI  G  R    E++ + F+   +S    E  +       + G 
Sbjct: 344 MIAPEGYG--------EIIGGSQRIDDPELLEKRFAEHELS----EEAYRWYMDLRKYGT 391

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            PH G   G++R +  + G  +VRE   FP  
Sbjct: 392 VPHSGFGLGLERTIAWICGLDHVRETIPFPRM 423


>gi|227544676|ref|ZP_03974725.1| lysine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300909082|ref|ZP_07126545.1| lysine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185322|gb|EEI65393.1| lysine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300894489|gb|EFK87847.1| lysine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 508

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 77/311 (24%), Positives = 127/311 (40%), Gaps = 31/311 (9%)

Query: 4   YRTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
            R H   DL           ++++G+ V ++G + R R  G   F D  D  G  QV A 
Sbjct: 31  KRDHLAQDLHDKFDQYDKEELNEMGAKVIIAGRMTRKRSSGKAGFADFVDRTGKIQVYAR 90

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D    E     +   +    G  +    + I     TG++ + A KI  LS A   PLP
Sbjct: 91  KDMVGDEPYHVFKRSDI----GDFLGIEGDVI--KTDTGELTVRAHKITFLSKALR-PLP 143

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TA 171
              +        ++ R+LDL  +    K   +RT II ++R  M    F E  TPIL T 
Sbjct: 144 NKWDGVTDPETIYRQRYLDLISNPESFKRFHQRTAIIKAVRKYMDDNGFTEVETPILNTQ 203

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F+          Y L  A + Y + L+  GF+R +++   FR+E        
Sbjct: 204 AGGANARPFITHHNALDIDMY-LRIATELYLKRLIVGGFERVYELGRIFRNEGMD-PHHN 261

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDA 282
            EF  ++   ++ +  D+++  E +++   +  S+   ++           F RI   DA
Sbjct: 262 PEFTTMETYAAYFDFQDVMDETEGIVKAAAKVVSDDGKITYQGHEIDLGGNFKRITMVDA 321

Query: 283 IRRY-GTDKPD 292
           ++   G D  D
Sbjct: 322 VKEKTGIDFSD 332



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 10/154 (6%)

Query: 421 AQELGIINCNCFEFCW----IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           A++L   +   ++  W    I++  F E+ E+   +      +  P       K N    
Sbjct: 340 AKKLADEHKIEYKPYWTKGHILNAFFEEFVEDT--LIQPTFVYEFPVEVSPLAKRNADNP 397

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCG 532
               +++L  +G E+A+     +      + F      K    +  E       +A + G
Sbjct: 398 AMTDRFELYVDGSELANAFSELNDPIDQKERFEMQAKEKANGNDEAEPVDLDYVQALEYG 457

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP GG+  GIDR+VMLL  AK++R+V LFP  +
Sbjct: 458 MPPTGGLGIGIDRLVMLLTDAKSIRDVILFPTMR 491


>gi|225166205|ref|ZP_03727917.1| lysyl-tRNA synthetase [Opitutaceae bacterium TAV2]
 gi|224799553|gb|EEG18070.1| lysyl-tRNA synthetase [Opitutaceae bacterium TAV2]
          Length = 519

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 58/305 (19%), Positives = 114/305 (37%), Gaps = 14/305 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +  +R  GG  F+ I D  G  Q+    D    E     +   +    G+    
Sbjct: 75  VAVAGRLVTIRVQGGSAFVKILDQQGQIQLYIRRDVIGLEAYTEFKKLDLGDFIGV---- 130

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL-H 139
                     TG+I + A    ++S A   PLP            ++ R+LDL  +    
Sbjct: 131 --TGTLFKTKTGEITVRADNYTLVSKALR-PLPEKWHGLSDPEQVYRQRYLDLIVNPESR 187

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             +  R++II  +R  +   NF+E  TP+L + +   A           G  + L  + +
Sbjct: 188 ARLQLRSKIITHIRRFLEDRNFLEVETPVLQSVAGGAAARPFETHHNALGVDFVLRISLE 247

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + ++  GFDR F+I   FR+E   S R   EF  L++  ++ +   ++  + ++ + 
Sbjct: 248 LYLKRMLVGGFDRVFEIGRNFRNEGV-SRRHNPEFTMLEVYQAYSDYRGMMTLVRDLFQS 306

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           +  +      + +             +  D  ++    ++ + T            KI +
Sbjct: 307 LCRDVLGTTEIKHA-----ASGETINFAGDWREVPYKDLIKDATNDPDWFSRSKTEKIAA 361

Query: 320 VNPGY 324
                
Sbjct: 362 AQKLG 366



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 74/204 (36%), Gaps = 18/204 (8%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
                     +  +     D  +F      K  +         AQ+LG+     +E   I
Sbjct: 328 FAGDWREVPYKDLIKDATNDPDWFSRSKTEKIAA---------AQKLGLYADPKWEDYEI 378

Query: 438 MDFPFYEWNEEE--KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            +  F +  E    +     H P  +    +  L   D   I    ++L   G EIA   
Sbjct: 379 TNEIFSKKIEPTLIQPTFVTHLPKELCP--LAKLNLEDPSVI--DVFELTIGGMEIAPAY 434

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
              +  +V  Q F         ++        A + GMPP GG+  GIDR+ +LL GA++
Sbjct: 435 SEQNDPDVQRQMFEAQAGE--DIQKIDTDFLLALEHGMPPAGGMGIGIDRLCILLTGAES 492

Query: 556 VREVSLFPM-SQNFCDLLMGSPST 578
           +R+V LFP    +     +  P +
Sbjct: 493 IRDVILFPQLRPSAASPTVEKPES 516


>gi|146689|gb|AAA24096.1| lysyl-tRNA synthetase (lysU) (E.C. 6.1.1.6) [Escherichia coli]
          Length = 501

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 73/323 (22%), Positives = 134/323 (41%), Gaps = 35/323 (10%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDII---GAGTLFKTQTGELSIHCTELRLLTKALR-PLPD 154

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 155 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 214

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          YA   AP+ Y + L+  GF+R F+     R+E  R  R   
Sbjct: 215 GGASARPFITHHNALDLDMYA-RIAPELYLKRLVVGGFERVFE--HVTRNEGIR--RHNP 269

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  +++ M++ +  D++   E++ R + +E      V+           F ++   +AI
Sbjct: 270 EFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAI 329

Query: 284 RRYGT--DKPDLRNPIIMHNVTE 304
           ++Y    D  DL N      + E
Sbjct: 330 KKYRPETDMADLDNFDARKALAE 352



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 62/164 (37%), Gaps = 22/164 (13%)

Query: 415 DARNHIAQELGIINCNCF--------EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
           DAR  +A+ +GI     +         F  ++          E  +         P    
Sbjct: 345 DARKALAESIGITVEKSWGLGRSVTEIFDEVV----------EGHVIQPSFITEYPAEVS 394

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL- 525
              + ND+      +++    G EI +G    + +E   + F     +K   ++      
Sbjct: 395 PLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYD 454

Query: 526 ---YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                A + G+PP  G+  GIDR++ML   +  +R+V LFP  +
Sbjct: 455 EDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFPAMR 498


>gi|307596403|ref|YP_003902720.1| aspartyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307551604|gb|ADN51669.1| aspartyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 433

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 94/383 (24%), Positives = 163/383 (42%), Gaps = 45/383 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-- 62
           +TH   D+     G  V L+GWV  +R  G I F+ +RD  GI Q+      A   +   
Sbjct: 6   KTHWTKDVTPELDGKEVILTGWVWDIRDLGNIKFILLRDREGIIQLTVKKGVAPEGVWSL 65

Query: 63  -KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +S+  E  + + G+V +       + I    +E+   +I +++ ++ LP+ ++G  E  
Sbjct: 66  TQSLGREDAIAVKGVVKA-------SKIARAGVEVFPSEIHVVAKSKALPIDIWGSVETD 118

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              R KYR +DL+R          + +  ++R  +    FIE  TP +  +S EG  +  
Sbjct: 119 LDTRLKYRSIDLKRPINSLIFRVESEVTRAIRETLYGRGFIEVFTPKIIVTSTEGGAELF 178

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + ++ A  Q+PQ YK+ L AS  +R F+IAP +R E   ++    EF  +D+E 
Sbjct: 179 TVQYFERAAYLA--QSPQLYKEELTAS-LERVFEIAPAYRAEKHNTNYHLNEFISVDIEE 235

Query: 242 SFVEQDDILNTMENVLRGVFEEFSN------------GNTVSNNFLRICYDDAIRR---- 285
           +F    D+++ +E+V+  V+E  +                    F RI YD+A+      
Sbjct: 236 AFANYMDVMDVLEDVIISVYERVNKVFSNELAKYGIEIKIPKKPFRRITYDEALDMLSRR 295

Query: 286 -----YGTDKPDLRNPIIMHNVTE----HFVHSEFRVF-SKILSVNPGYEVWAIPAKGG- 334
                +G D P     ++     E        ++ R F +K L  +P          GG 
Sbjct: 296 GLKINWGDDVPKNGLELLSEEFNEPFFIIHFPTDLRAFYTKPLDSDPKISESFDLVIGGL 355

Query: 335 ----GGNRAFCDR-MNEWARSQG 352
               G +R      + E  R +G
Sbjct: 356 EIASGSSRIHIKEQLIEALRKRG 378



 Score = 97.1 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 9/153 (5%)

Query: 422 QELGIINCNCFEFCWIMDFP---FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           + L +++    +  W  D P       +EE  +  F  +  T  +        +D     
Sbjct: 287 EALDMLSRRGLKINWGDDVPKNGLELLSEEFNEPFFIIHFPTDLRAFYTKPLDSDPK--I 344

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  +DLV  G EIASG  R H+ E +++A    G++       F      +  GMPPH G
Sbjct: 345 SESFDLVIGGLEIASGSSRIHIKEQLIEALRKRGLNP----ENFESHLMVYDYGMPPHAG 400

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
              G+ R++M+LL   N+REV L+P  +   + 
Sbjct: 401 WGMGLYRLLMVLLKRDNIREVVLYPRDRFRLEP 433


>gi|51245481|ref|YP_065365.1| lysyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|50876518|emb|CAG36358.1| probable lysyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 503

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 57/283 (20%), Positives = 113/283 (39%), Gaps = 20/283 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G V  +R  G   F  + D  G  Q+    D    EI    +   +  I G+     
Sbjct: 59  SVAGRVMAMRKFGKAAFFQVMDKTGRVQIYIKKDVIGEEIFAQFKKWDIGDIVGI----- 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHK 140
            +        G++ ++A  ++++S +   PLP           R++ R++DL       +
Sbjct: 114 -KGHLFKTKVGELSIAASSVQMISKSLR-PLPDKWHGLSDVETRYRQRYVDLIVTPESRE 171

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
              KR  II  +R  +    F+E  TP++ A      A+ F           Y L  AP+
Sbjct: 172 VFRKRGEIIRHIRDFLSDRGFMEVETPMMQAVPGGATAKPFKTHHNALDMDLY-LRVAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G +R F+I   FR+E   +   P EF  L+   ++   +D+++  E ++  
Sbjct: 231 LYLKRLLVGGLERVFEINRNFRNEGLSTRHNP-EFTMLEFYQAYATYEDMMDITEEMVST 289

Query: 260 VFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPDL 293
             E+ +    +            + R+   +++ +     P++
Sbjct: 290 ACEKVNGSMQIQYQGTDVNLAPPWQRMTMQESLTKVAGIAPEI 332



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 7/127 (5%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
            +E   EEK ID      T     +  L + ND       +++L   G E+A+     + 
Sbjct: 363 LFELLVEEKLIDPTF--ITSYPTEVSPLARRNDEDPSTTDRFELFITGRELANAFSELND 420

Query: 501 SEVMLQAFSNVGISKEVVEN---RFGG-LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                Q F+     +   E           RA + GMP   G   GIDR+ MLL  + ++
Sbjct: 421 PVDQYQRFAKQIAERGDDEEIHPELDHDYIRALEYGMPSAAGEGIGIDRLTMLLTDSPSI 480

Query: 557 REVSLFP 563
           R+V  FP
Sbjct: 481 RDVIFFP 487


>gi|124026775|ref|YP_001015890.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|123961843|gb|ABM76626.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 513

 Score =  199 bits (507), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 66/342 (19%), Positives = 132/342 (38%), Gaps = 26/342 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-----NPDSACFEIAKSVRSEWVLCID 74
            V ++G V   R  G + F  + D  GI Q+       N +        +  +   L   
Sbjct: 59  EVSIAGRVTSRRVMGKLAFFTLSDETGIIQLFLEKATLNRNEDSENPKNNFENITSLVDS 118

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G  +  S      +   G++ +   +  +LS + + PLP           R++ R+LDL 
Sbjct: 119 GDWIGVSGILRRTD--RGELSIKVFEWSMLSKSLQ-PLPDKWHGLADVEKRYRQRYLDLI 175

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            +   +   + R  +++S+R  +  ++F+E  TP+L + +    AR F+          Y
Sbjct: 176 VNPQSRKTFRTRALLVSSIRRWLDEKDFLEIETPVLQSEAGGADARPFITHHNTLDLPLY 235

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + + + L+  GF R +++   FR+E   +   P EF  +++  +F +  D+++ 
Sbjct: 236 -LRIATELHLKRLVVGGFQRVYELGRIFRNEGISTRHNP-EFTSVEIYEAFADYFDMMDL 293

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            E +L  V E+      ++     I      RR             MH++ + F   +F 
Sbjct: 294 TEKLLSSVCEKICGSTKINYQEQEIDLQPPWRR-----------ATMHDLVKEFTGIDFE 342

Query: 313 VF---SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           +F   +         E   +P K         +   +    +
Sbjct: 343 LFGDNADDAKAEMSREGLQVPDKADTVGILLNEAFEQAVEPE 384



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 49/141 (34%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +     +  ++MD+P      E   +   H                        +++L  
Sbjct: 381 VEPELIQPTFVMDYPI-----EISPLARKHR----------------TKKGLVERFELFI 419

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAG 542
            G E A+            +        KE      ++       A + GMPP GG+  G
Sbjct: 420 VGRETANAFSELIDPIDQRERLLLQQAKKEAGDLEAQSLDEDFINALEVGMPPTGGLGIG 479

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR VMLL  + ++R+V  FP
Sbjct: 480 IDRFVMLLTDSPSIRDVIAFP 500


>gi|159898199|ref|YP_001544446.1| lysyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|238687095|sp|A9B5T5|SYK_HERA2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|159891238|gb|ABX04318.1| lysyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 492

 Score =  199 bits (507), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 62/332 (18%), Positives = 120/332 (36%), Gaps = 23/332 (6%)

Query: 5   RTHSCGDLGVS-----DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           RTH+   +        +  + V + G + + R  G   F  + D +G  Q+  +      
Sbjct: 32  RTHTLTAVREQFSALVEANATVTIMGRLRQRRVMGKSAFAHLNDDHGAFQIFLSKADVGD 91

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E  K       L   G +++ +       +  G+  +      +LS A   P      + 
Sbjct: 92  EPFKHFVD---LTDLGDIIAVTGTLFTTKM--GEPSVHVTSWTMLSKAITPPPDKREGQF 146

Query: 120 YPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
             +  R + R++DL     + +    R R+I +MR  +    F+E  TP+L       A 
Sbjct: 147 SDQEARQRQRYVDLSANPEVREIFRIRARLITAMRRYLDERGFLEVETPVLQGIYGGAAA 206

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                          L  A + Y + L+  GFD  ++I   FR+E       P EF  ++
Sbjct: 207 RPFTTHHNQLHQDLYLRIATELYLKRLIVGGFDGVYEIGKNFRNEGVDRTHNP-EFTMIE 265

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTD 289
           +  ++ + + I+   E ++R   E+  N  ++            + R+   DAI  +   
Sbjct: 266 VYQAYGDYESIMQLTEGMIRFAAEQIFNSTSIEYQGHQIELGGSWQRLTMRDAI--FEKT 323

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
             D+R       + E    +  ++  K     
Sbjct: 324 GVDIRECREFDTLWEAIGEAGLKIERKPTWAK 355



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF--- 522
           +   K +D   +   +++L   G EIA+     +      Q F   G      ++     
Sbjct: 385 LAKRKADDPQFV--ERFELFMLGAEIANAFSELNDPFDQEQRFLEQGRDYAAGDDEAMQM 442

Query: 523 -GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 A + GMPP GG+  GIDR+ +L      +REV  FP
Sbjct: 443 DEDYLEALKVGMPPTGGLGIGIDRLCLLFTNQTTIREVIFFP 484


>gi|312138065|ref|YP_004005401.1| lysyl-tRNA ligase lyss [Rhodococcus equi 103S]
 gi|311887404|emb|CBH46716.1| lysyl-tRNA ligase LysS [Rhodococcus equi 103S]
          Length = 503

 Score =  199 bits (507), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 105/581 (18%), Positives = 184/581 (31%), Gaps = 134/581 (23%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  ++          S  G  V + G V  VR  G + F  +++  G         +
Sbjct: 40  RTHSLAEIRAKYPDLEPDSSTGEQVGVVGRVIFVRNTGKLCFATLQEGDGTQLQAMLSLA 99

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E A +     V    G  +    E I++    G++ + A   ++   A+ L      
Sbjct: 100 NVGEDALAAWKSDVDL--GDFVFVHGEVISSR--RGELSVMADTWQM--AAKSLRPMPVA 153

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
            +E  E  R + R+ DL  R        KR  ++  +R  +    F+E  TP+L      
Sbjct: 154 HKEMSEESRVRQRYADLIIRPEARDMARKRVAVVRELRNALERRGFLEVETPMLQTLHGG 213

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+  S       Y L  AP+ + +  +  G ++ F+I   FR+E   S   P EF
Sbjct: 214 AAARPFVTHSNALDIDLY-LRIAPELFLKRCVVGGIEKVFEINRNFRNEGVDSTHSP-EF 271

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
             L+                       E +   +  +     +  + A   +GT      
Sbjct: 272 AMLETY---------------------EAYGTYDDSAKMIRELVQEVAQAAFGTQV---- 306

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354
             + + + TE+ +  E++      S++    V   P                        
Sbjct: 307 --VTLADGTEYDLSGEWKTMEMYPSLSAAIGVDVTP------------------------ 340

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
                                     +    A+  R+ ++                    
Sbjct: 341 -----------------------DTTVEELLALAERVGLE--------------VPKDKG 363

Query: 415 DARNHIAQELGIINCNC--FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                + +EL    C    FE  ++ +FP               +P T     +      
Sbjct: 364 YGHGKLVEELWEHQCGDQLFEPTFVRNFP------------VETSPLTRQHRSLP----- 406

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRA 528
                   ++DL   GFE+A+G        +  + F +        ++           A
Sbjct: 407 ----GVTEKWDLYVRGFELATGYSELVDPIIQRERFMDQARLASAGDDEAMVLDEEFLAA 462

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            + GMPP  G   GIDR++M L G   +RE  LFP+ +   
Sbjct: 463 MEQGMPPTTGTGMGIDRLLMALTGLG-IRETILFPIVRPAA 502


>gi|72383033|ref|YP_292388.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|72002883|gb|AAZ58685.1| lysyl-tRNA synthetase, class-2 [Prochlorococcus marinus str.
           NATL2A]
          Length = 513

 Score =  199 bits (507), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 63/304 (20%), Positives = 124/304 (40%), Gaps = 23/304 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-----NPDSACFEIAKSVRSEWVLCID 74
            V ++G V   R  G + F  + D  GI Q+       N +        +  +   L   
Sbjct: 59  EVSIAGRVTSRRVMGKLAFFTLSDETGIIQLFLEKATLNRNEDSENPKNNFENITSLVDS 118

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G  +  S      +   G++ +   +  +LS + + PLP           R++ R+LDL 
Sbjct: 119 GDWIGVSGILRRTD--RGELSIKVFEWSMLSKSLQ-PLPDKWHGLADVEKRYRQRYLDLI 175

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            +   +   + R  +++S+R  +  ++F+E  TP+L + +    AR F+          Y
Sbjct: 176 VNPQSRKTFRTRALLVSSIRRWLDEKDFLEIETPVLQSEAGGADARPFITHHNTLDLPLY 235

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + + + L+  GF R +++   FR+E   +   P EF  +++  +F +  D+++ 
Sbjct: 236 -LRIATELHLKRLVVGGFQRVYELGRIFRNEGISTRHNP-EFTSVEIYEAFADYFDMMDL 293

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            E +L  V E+      ++     I      RR             MH++ + F   +F 
Sbjct: 294 TEKLLSSVCEKICGSTKINYQEQEIDLQPPWRR-----------ATMHDLVKEFTGIDFE 342

Query: 313 VFSK 316
           +F  
Sbjct: 343 LFGD 346



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 49/141 (34%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +     +  ++MD+P      E   +   H                        +++L  
Sbjct: 381 VEPELIQPTFVMDYPI-----EISPLARKHR----------------TKKGLVERFELFI 419

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAG 542
            G E A+            +        KE      ++       A + GMPP GG+  G
Sbjct: 420 VGRETANAFSELIDPIDQRERLLLQQAKKEAGDLEAQSLDEDFINALEVGMPPTGGLGIG 479

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR VMLL  + ++R+V  FP
Sbjct: 480 IDRFVMLLTDSPSIRDVIAFP 500


>gi|48478286|ref|YP_023992.1| aspartyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|62287564|sp|Q6KZQ3|SYD_PICTO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|48430934|gb|AAT43799.1| aspartyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 423

 Score =  199 bits (507), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 87/349 (24%), Positives = 151/349 (43%), Gaps = 23/349 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGLVM 78
            V LSGW   +R    I+F+ +RD  G  QV    ++   F+    +  E VL + G V 
Sbjct: 13  EVELSGWAEDIRRIKSIVFIILRDVTGRIQVTVKSENVKNFDEVYKINRESVLKVHGTVD 72

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +S            IE+ A  +EIL+ AE  LPL V  + +     R   R++DLR+D 
Sbjct: 73  HQSRS-------KSGIEIIADSVEILNAAEAPLPLGVVDKVQADLDTRLNNRYIDLRKDE 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  ++ ++  +R  +    FIE  TP + A++ EG  D        + ++  L Q+
Sbjct: 126 NLIIFKAQSTLLWGIREYLNRLGFIEVHTPKIVAAATEGGADLFPVKYFERDAY--LNQS 183

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           PQ YK++LMA+GF++ F++ P FR E   + R   EF  +D+EMSF + +D+++ +EN +
Sbjct: 184 PQLYKEILMAAGFEKVFEVGPAFRAEKENTLRHLNEFTSIDIEMSFADHNDVMDVLENTV 243

Query: 258 RGVFEEFSNG------------NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           +       N             ++++    RI Y +AI    +    +            
Sbjct: 244 KNAINTLKNNLGDELNKHGFNIDSINGRIPRITYREAIDYLNSSGFQMNFGDDFSPEAAR 303

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354
            +   ++ F  I         +    K     ++F  ++ E     G  
Sbjct: 304 VLGERYKSFYFITEWPVSLRPFYTMKKDDETTKSFDLQLRELEICSGAQ 352



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 58/136 (42%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
            F +I ++P             +  PF   +   E+             +DL     EI 
Sbjct: 311 SFYFITEWP------------VSLRPFYTMKKDDET----------TKSFDLQLRELEIC 348

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  + ++    N G++       F     AF+ GMPPH G A G++R+ M LLG
Sbjct: 349 SGAQRIHRYDDLVNNIKNKGLNP----ESFTFYLSAFRYGMPPHAGWAIGLERLTMNLLG 404

Query: 553 AKNVREVSLFPMSQNF 568
            KNVRE +LFP  +  
Sbjct: 405 IKNVRETTLFPRDRTR 420


>gi|238926930|ref|ZP_04658690.1| lysine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238885164|gb|EEQ48802.1| lysine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 501

 Score =  199 bits (507), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 74/342 (21%), Positives = 134/342 (39%), Gaps = 27/342 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L   + G  V ++G +  +R HG   F  + D  G  QV    D    +  K    E+  
Sbjct: 56  LAEDEEGKEVHIAGRLMAIRGHGKASFSTLNDRTGNIQVYFKLDVLGEQKYKE---EFKR 112

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++      +      G++ +  +  ++L+ A   PLP           R++ R+L
Sbjct: 113 LDIGDIIGIRG--VVFKTRRGEVTVRVEDFDLLAKALR-PLPEKFHGLKDVDTRYRQRYL 169

Query: 132 DLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQG 189
           DL  +  + +   KRT I+ S+R  + A +F+E  TP+L T +    AR F+        
Sbjct: 170 DLMVNQEVRETFRKRTAILQSIRRYLDARDFLEVETPVLSTLAGGAAARPFVTHHNALDI 229

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A +   + L+  G DR +++   FR+E       P EF  +++  +F +  D+
Sbjct: 230 DLY-LRIATELSLKRLIVGGLDRVYEMGRVFRNEGMDVRHNP-EFTSIEIYQAFADHYDL 287

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           +   E ++R   E+            +I Y       G  +      I M++        
Sbjct: 288 MAITEGIVRQAAEDVLGTT-------KITYQGVEIDLGQVRT-----ISMNDAVREATGK 335

Query: 310 EFRVFSKILSVNPGYEVWAIPAK-----GGGGNRAFCDRMNE 346
           +F     +           +P +     GG  N AF +++ E
Sbjct: 336 DFLSCRTVDEARAMAREIHVPFEERHGIGGILNAAFEEKVEE 377



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 71/178 (39%), Gaps = 11/178 (6%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE--KKI 452
             D+     G     C    +AR  +A+E+ +          I++  F E  EE   +  
Sbjct: 325 MNDAVREATGKDFLSCRTVDEAR-AMAREIHVPFEERHGIGGILNAAFEEKVEESLMQPT 383

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
               +P  +    +     +D       +++    G E+A+G    +      Q F +  
Sbjct: 384 FITGHPTEISP--LAKRNADDPR--ITDRFEFFIYGRELANGFTELNDPIDQEQRFLDQL 439

Query: 513 ISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             +E  +            A + G+PP GG+  GIDR+VMLL  + ++R+V LFP  +
Sbjct: 440 AQREAGDAEAHVMDHDYVTALEYGLPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPTMK 497


>gi|332970948|gb|EGK09922.1| lysine--tRNA ligase [Desmospora sp. 8437]
          Length = 499

 Score =  199 bits (507), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 67/343 (19%), Positives = 128/343 (37%), Gaps = 31/343 (9%)

Query: 12  LGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           L   ++      V ++G +   R  G   F  ++D  G  Q+    D    E  ++  + 
Sbjct: 52  LSKEEIEEKQQAVVIAGRLVAKRKQGKASFAHLQDQTGRIQIYVRKDEVGEEDYETFSTA 111

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            +    G+        I      G+  + A ++  LS +   PLP          +R++ 
Sbjct: 112 DLGDWLGI------SGIVFKTNRGETSVKAAELTFLSKSLR-PLPEKFHGLKDVELRYRK 164

Query: 129 RFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R+LDL  +   KN  + R+RII+++R  +    ++E  TP L        AR F+     
Sbjct: 165 RYLDLIMNPEVKNTFITRSRIISTIRRYLDGRGYLEVETPTLHNIPGGAAARPFITHHNA 224

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  A + + + L+  G ++ ++I   +R+E   +   P EF  L++  +F + 
Sbjct: 225 LDMELY-MRIAIELHLKRLIVGGIEKVYEIGRVYRNEGISTRHNP-EFTMLELYEAFADF 282

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---MHNVT 303
            DI++  E ++  V  E    +T               RYG    +L  P     M ++ 
Sbjct: 283 HDIMDLTEQLITHVAREVLGSDT--------------LRYGEHTVELGKPWARKHMVDLV 328

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           +     +F               + +  K G       +   E
Sbjct: 329 KEHTGIDFWQGVSDEEARSLAREYGVELKPGMTFGHIVNEFFE 371



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 62/151 (41%), Gaps = 12/151 (7%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLS 476
           +A+E G+       F  I++  F+E   EEK I       +P  +    +      D   
Sbjct: 348 LAREYGVELKPGMTFGHIVN-EFFEQKVEEKLIQPTFVYGHPVEISP--LARKNEKDPR- 403

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++L   G E A+     +      + F      K    +           A + G
Sbjct: 404 -FTDRFELFIVGREHANAFTELNDPLDQRERFEAQVREKSQGNDEAHPMDEDFLEALEYG 462

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 463 MPPTGGLGIGIDRLVMLLTDSASIRDVLLFP 493


>gi|238879131|gb|EEQ42769.1| hypothetical protein CAWG_00990 [Candida albicans WO-1]
          Length = 580

 Score =  199 bits (507), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 139/533 (26%), Positives = 233/533 (43%), Gaps = 75/533 (14%)

Query: 6   THSCGDLGVSDVGS-------FVRLSGWVHRV-RPHGGIIFLDIRDHYGI-TQVVANP-- 54
           TH+   +  S++          V L+G VHR  R    + F  +RD  G   Q++A P  
Sbjct: 49  THTIKSID-SNIEKYLNKQQIKVTLNGHVHRKSRIRPTLGFAFLRDTNGDEIQLLATPKY 107

Query: 55  -DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPL 112
            + + FE+ K +  E  + + G +  + ++    +    Q EL  +  +IL+ +  +   
Sbjct: 108 TEPSIFELMKKLTVEDSVSVSGFIQPKESK----SGKEQQWELVVENFQILNSSNLDAAQ 163

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI-AENFIECSTPILTA 171
               +   P+ I  ++R+L LR     K++  R+     +R   I    F+E  TP+L  
Sbjct: 164 LDKLKHNNPQDIPPQFRYLQLRTPYYQKSLRLRSEAARLIRDIFIKNHEFVEIETPLLFK 223

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           S+PEGAR+FLVP+R     FYALPQ+PQQYKQ+LM+SGF RYFQ+A CFRDED RSDR P
Sbjct: 224 STPEGAREFLVPTRSF-NKFYALPQSPQQYKQILMSSGFTRYFQVAKCFRDEDLRSDRQP 282

Query: 232 GEFYQLDMEMSFVEQDDILNT-MENVLRGVFEEFSNGNTV------------------SN 272
            EF Q+D+EMSFV   D +   +E+V+  V+ +     T                   S 
Sbjct: 283 -EFTQIDLEMSFVNNSDQVGIVVEDVIHNVWNKVGGKLTYKVNDEGFLVEADLAEVGKSL 341

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            F ++ Y D + +YG DKPDLR+ +   ++ + F+  E   F  ++ V      +   + 
Sbjct: 342 QFSKLNYIDVLVKYGIDKPDLRSNLSFISLEDFFIAKENADFP-VVEVCVLKGAFDASSG 400

Query: 333 GGGGNRAFCDRMNE-------WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE 385
                ++F D  N        WA  +      Y    +D +        +    N  +  
Sbjct: 401 KYKLPKSFIDDHNFSSRRPYVWAIQRNDDTFGYFKKLIDAN--------IIATTNTFDES 452

Query: 386 AIRVRLDMQDGDSCFFIAGDPLKFCS--FAADARNHIAQELGI--------------INC 429
            ++  L++Q GD           + +       R    +E                 ++ 
Sbjct: 453 KLQKLLNLQPGDILAVSTRAKFPYENPTPLGKFRQLAIEEFPHKWQRPIVMENGQLSVDY 512

Query: 430 NCFEFC---WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +  +     W+++FP +   EE  +        + P+  + +LK  +   I +
Sbjct: 513 DRNDIVVGSWVVNFPLFNPVEESGQTSHVTEESSKPKYPVYNLKKLNPHIIHS 565


>gi|323143524|ref|ZP_08078204.1| lysine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322416718|gb|EFY07372.1| lysine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 508

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 63/308 (20%), Positives = 123/308 (39%), Gaps = 31/308 (10%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
               ++G +   R  G   F  ++D  G  Q+    D+      + +  +  L   G ++
Sbjct: 64  KTFTVAGRMMTRRIMGKASFATLQDMGGKIQIYVTRDALPEGQYQELFKKLDL---GDII 120

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
             +         TG++ L    + +L  A   PLP   +    +  R + R+LDL  +  
Sbjct: 121 GVTG--YAFKTKTGELTLHVTALRLLVKALR-PLPEKYKGLTDQEARCRQRYLDLIANEE 177

Query: 139 HKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
            +     RT+I++ +R  M +  F+E  TP++        A+ F+          Y L  
Sbjct: 178 SRRTFEIRTKIVSFIRSYMDSHRFMEVETPMMHVIPGGANAKPFITHHNALDIDMY-LRI 236

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + + L+  GF+R ++I   FR+E       P EF  ++  M++ +  D+++  E++
Sbjct: 237 APELFLKRLVVGGFERVYEINRNFRNEGIDVRHNP-EFTMMEFYMAYHDYHDLIDFTEDL 295

Query: 257 LRGVFEEFSNGN--------------TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
            R +  E                     +  F R+   ++I +YG       N I M ++
Sbjct: 296 FRKMALEVLGDTKVHYGKEGEEGLDIDFAKPFDRLTMKESIVKYG-------NGITMEDL 348

Query: 303 TEHFVHSE 310
            +     E
Sbjct: 349 DDAEKTKE 356



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 92/327 (28%), Gaps = 23/327 (7%)

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           S+++    +     ++         G   +  F+       I  Y    P+L    ++  
Sbjct: 194 SYMDSHRFMEVETPMMH-----VIPGGANAKPFITHHNALDIDMYLRIAPELFLKRLVVG 248

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA-FCDRMNEWARSQGQPGLAYIF 360
             E          ++ + V    E   +       +     D   +  R      L    
Sbjct: 249 GFERVYEINRNFRNEGIDVRHNPEFTMMEFYMAYHDYHDLIDFTEDLFRKMALEVLGDTK 308

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
               + G        AK  + +  +   V+              D  K           +
Sbjct: 309 VHYGKEGEEGLDIDFAKPFDRLTMKESIVKYGNG---ITMEDLDDAEKT--------KEL 357

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++L I     +E    +   F E  EE   +       + P       + +D       
Sbjct: 358 CKKLHIEIMPSWEHGHFIAALFDELVEE--HLQQPTFITSYPAEISPLARRSDSDPRYTD 415

Query: 481 QYDLVCNGFEIASGGIRNHMSEVML----QAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +++    G E+ +G    +  +       Q         +           A Q G+PP 
Sbjct: 416 RFEFFIGGREMGNGFSELNDPDDQASRFHQQAEAKKHGDDEAMYYDEDYIVALQHGLPPT 475

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR VML      +R+V LFP
Sbjct: 476 AGEGIGIDRTVMLFTNCHTIRDVILFP 502


>gi|288905716|ref|YP_003430938.1| lysyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|306831812|ref|ZP_07464968.1| lysine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|325978748|ref|YP_004288464.1| lysyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732442|emb|CBI14014.1| lysyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|304426010|gb|EFM29126.1| lysine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|325178676|emb|CBZ48720.1| lysyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 496

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 62/359 (17%), Positives = 131/359 (36%), Gaps = 32/359 (8%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             ++     ++G +   R  G + F  I+D  G  Q+    
Sbjct: 37  RTATSGQLKEKYADKTKEELHEINKTATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  +  LS A   PLP 
Sbjct: 97  DAVGDENYQIFKKADL----GDFLGIEGEIMRTDM--GELTIKATHLTHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                     +++ R+LDL  +       V R++II+ +R  +    F+E  TP+L   +
Sbjct: 150 KFHGLTDVETKYRKRYLDLISNRESFDRFVTRSKIISEIRRYLDGLGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G ++ ++I   FR+E       P E
Sbjct: 210 GGAAARPFITHHNAQDMDMVLRIALELHLKRLIVGGMEKVYEIGRVFRNEGMDVTHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E +++   +  +    +S     I  D   +R        
Sbjct: 269 FTMIELYEAYADFKDIMDITEGIIQHASKAVNGDGPISYQGTEIAIDQPFKR-------- 320

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWARS 350
              + M +  +     +F     +       +   +P +    +          E+   
Sbjct: 321 ---VHMVDAIKEVTGVDFWKEMTLEEAQAIAKEKNVPVEKHFTSVGHIINAFFEEFVEE 376



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 74/199 (37%), Gaps = 10/199 (5%)

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
           GP++     +  +    R+ M D            +     A A   IA+E  +     F
Sbjct: 303 GPISYQGTEIAIDQPFKRVHMVDAIKEVTGVDFWKEMTLEEAQA---IAKEKNVPVEKHF 359

Query: 433 EFC-WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
                I++  F E+ EE   +      +  P       K N        +++L     E 
Sbjct: 360 TSVGHIINAFFEEFVEET--LIQPTFVYGHPVEVSPLAKKNAEDPRFTDRFELFIMTKEY 417

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIV 547
            +     +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+V
Sbjct: 418 GNAYSELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLV 477

Query: 548 MLLLGAKNVREVSLFPMSQ 566
           MLL     +R+V LFP  +
Sbjct: 478 MLLTDTTTIRDVLLFPTMK 496


>gi|329769858|ref|ZP_08261257.1| lysyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328837912|gb|EGF87536.1| lysyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 500

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 70/394 (17%), Positives = 148/394 (37%), Gaps = 43/394 (10%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   +L           + +    V ++G +   R  G   F  ++D  G  Q+    
Sbjct: 41  RTHLSNELVEEFDKFSKEELEEKSVTVTIAGRIMTKRGKGKAGFAHVQDLGGQIQIYVRQ 100

Query: 55  DSAC--FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           D     +E  K++    ++ + G++   +          G++ + A K EIL+ A   PL
Sbjct: 101 DRVGDSYEYFKTLDLGDIVGVTGVLFKTNV---------GELSVKADKFEILTKALR-PL 150

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL-T 170
           P           R++ R++DL  +   K   + R++II  MR  +    ++E  TP++ T
Sbjct: 151 PDKFHGLKDVEERYRRRYVDLIMNEDSKETFILRSKIIQIMRSYLNERGYLEVETPMMHT 210

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +    AR F+          + +  A +   + L+  G ++ ++I   FR+E   +   
Sbjct: 211 IAGGAAARPFVTHHNALDMELF-MRIALELPLKRLIVGGLEKVYEIGRAFRNEGVSTRHN 269

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  +++  ++ + +DI++  E+++  +  E                      YG D+
Sbjct: 270 P-EFTMIELYEAYADYNDIMDLTESMIAYICNEIHGTTK--------------IMYGEDE 314

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
            DL       ++ +         F + ++    + +          +      +NE+   
Sbjct: 315 IDLTPKWARIHMVDAIKDVTGVDFWQEMTDEQAHALAKEHNVPVRKDMKVGHIINEFFEV 374

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
             +  L    +     G+   + P+AK       
Sbjct: 375 FVEETLVQPTFIY---GHPVEVSPLAKTNAEDKR 405



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 4/123 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E+ +      +  P       K N        +++L     E A+     +      + F
Sbjct: 377 EETLVQPTFIYGHPVEVSPLAKTNAEDKRFTDRFELFIVRREHANAFSELNDPIDQKERF 436

Query: 509 SNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 K+     V         A + GMPP GG+  GIDR+VMLL  + ++R+V LFP 
Sbjct: 437 LAQMDEKDAGNEEVYEMDEDFVEALEYGMPPTGGLGIGIDRLVMLLTNSASIRDVLLFPY 496

Query: 565 SQN 567
            ++
Sbjct: 497 MKH 499


>gi|70726459|ref|YP_253373.1| asparaginyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|82582281|sp|Q4L6F8|SYN_STAHJ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|68447183|dbj|BAE04767.1| asparaginyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 430

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 75/322 (23%), Positives = 122/322 (37%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +      F++AK +  E  
Sbjct: 9   KQHLNQEVTIGAWLTNKRSSGKIAFLQLRDGSGFMQGVVVKSEVSDETFQLAKEITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G++   +   +         E+  + IE++  A + P+     + +       +R 
Sbjct: 69  LYVTGVITEDNRSDL-------GYEMQVKSIEVIHEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II +         F +   PILTAS+PEG  +       ++ +
Sbjct: 119 LWLRSKKQHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSELFHTKYFDEDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 179 F--LSQSGQLYMEAA-AMAHGRVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTNHVESL 235

Query: 251 NTMENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDAI+     G +  +
Sbjct: 236 EVQEQYVSHVVKSVLKNCQLELKALDRDTSKLEKVSAPFPRISYDDAIKFLKEEGFNDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 296 WGEDFGAPHETAIANHYDLPVF 317



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 33/200 (16%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCF--FIAGDPLKFCSFAADARNHIAQELGIINCNC 431
            V K+  +      R    ++   + F      D +KF            ++ G  +   
Sbjct: 248 SVLKNCQLELKALDRDTSKLEKVSAPFPRISYDDAIKFLKEEGFNDIEWGEDFGAPHETA 307

Query: 432 FE-----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDL 484
                    +I ++P                PF M       E++   DL++ + +    
Sbjct: 308 IANHYDLPVFITNYP------------TKIKPFYMQPNPENEETVLCADLIAPEGYG--- 352

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
                EI  G  R +  E++ Q      +        +       + G  PH G   G++
Sbjct: 353 -----EIIGGSERINDLELLEQRIDEHQLDA----ESYNYYLDLRRYGSVPHSGFGLGLE 403

Query: 545 RIVMLLLGAKNVREVSLFPM 564
           R V  + G ++VRE + FP 
Sbjct: 404 RTVAWISGVEHVRETAPFPR 423


>gi|116495963|ref|YP_807697.1| lysyl-tRNA synthetase (class II) [Lactobacillus casei ATCC 334]
 gi|116106113|gb|ABJ71255.1| Lysyl-tRNA synthetase (class II) [Lactobacillus casei ATCC 334]
          Length = 498

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 71/339 (20%), Positives = 133/339 (39%), Gaps = 36/339 (10%)

Query: 2   HRY-RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH+   +             D    V ++G +   R  G + F DIRD  G  Q+
Sbjct: 35  HRFDRTHTAAKVREEFGEDDKETLLDEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 94

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    +     +   +    G ++  S E +     +G++ + A  +  L+ A   
Sbjct: 95  YVRKDVVGDDNYMIFKKADL----GDILGISGEVM--KTDSGELTVKANHVTHLAKALR- 147

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           +++ R+LDL  +       VKRT+I++++R  +    F+E  TP+L
Sbjct: 148 PLPDKWHGLTDVEQKYRKRYLDLISNEDSFDRFVKRTKIVSAVREYLDNNGFLEVETPVL 207

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + L+  G +R ++I   FR+E   + 
Sbjct: 208 HNQAGGANARPFVTHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTK 266

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF +L+   ++ +  D++   E + R    +  +   ++              Y  
Sbjct: 267 HNP-EFTELETYAAYRDLTDVMTETEGIFRFAAHKVLDTGKLT--------------YQG 311

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
              DL  P    N+ +         F   +SV+   ++ 
Sbjct: 312 MAIDLDAPFARINMLDAIKDKTGVDFWPEMSVDDARKLA 350



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K N        +++L   G E A+     +      Q F      K    +   G     
Sbjct: 397 KKNPKDPRFVERFELFVGGGEYANAFTELNDPIDQRQRFEAQAAEKSAGNDEAQGIDDDY 456

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 457 VEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 494


>gi|49486294|ref|YP_043515.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|59798533|sp|Q6G9A8|SYN_STAAS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|49244737|emb|CAG43173.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MSSA476]
          Length = 430

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 77/322 (23%), Positives = 124/322 (38%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 9   KDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++S A + P+     + +       +R 
Sbjct: 69  LYVTGTITEDNRSDL-------GYEMQVKSIEVISEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +
Sbjct: 119 LWLRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F+   + L
Sbjct: 179 F--LSQSGQLYLEAA-AMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFINHAESL 235

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDAI      G D  +
Sbjct: 236 EIQEQYVTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAIEFLKSEGFDDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 296 WGEDFGAPHETAIANHYDLPVF 317



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 31/194 (15%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE---- 433
            L +   E    +L+            D ++F            ++ G  +         
Sbjct: 254 KLELKILERDTSKLEKVATPFPRISYDDAIEFLKSEGFDDIEWGEDFGAPHETAIANHYD 313

Query: 434 -FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFE 490
              +I ++P                PF M       E++   DL++ + +         E
Sbjct: 314 LPVFITNYP------------TKIKPFYMQPNPENEETVLCADLIAPEGYG--------E 353

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R    E++ Q     G+     E  +       + G  PH G   G++R V  +
Sbjct: 354 IIGGSERVDDLELLEQRVKEHGLD----EEAYSYYLDLRRYGSVPHCGFGLGLERTVAWI 409

Query: 551 LGAKNVREVSLFPM 564
            G ++VRE + FP 
Sbjct: 410 SGVEHVRETAPFPR 423


>gi|299821670|ref|ZP_07053558.1| asparagine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299817335|gb|EFI84571.1| asparagine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 430

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 78/323 (24%), Positives = 129/323 (39%), Gaps = 34/323 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEW 69
               VG  V +  W+   R  G I FL +RD  G  Q   V A      F+ AKS+  E 
Sbjct: 8   SADYVGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGEEIFQAAKSLTQET 67

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L + G++   +             E++   ++++S + + P+     +E+       +R
Sbjct: 68  SLYVTGIINEDTRSPF-------GYEIAVSGVKVISESHDFPITP---KEHGTEFLMDHR 117

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR +  H  +  R  II +       E FI+   PILT S+PEG  +       ++ 
Sbjct: 118 HLWLRSNRQHAIMKIRNEIIRASYEFFNNEGFIKIDPPILTGSAPEGTTELFHTKYFDED 177

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +F  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D 
Sbjct: 178 AF--LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYQLEDS 234

Query: 250 LNTMENVLRGVFEEFSNGNT---------------VSNNFLRICYDDAI---RRYGTDKP 291
           L   E  +  + +   +                  ++  F RI Y +AI      G D  
Sbjct: 235 LKVQEQYVAFLVKAVLDNCKLELERLGRDVSVLESMTAPFPRITYTEAIEKLHELGFDDI 294

Query: 292 DLRNPIIMHNVTEHFVHSEFRVF 314
           +  +     + T      E  VF
Sbjct: 295 EWGDDFGAPHETAIADSFEKPVF 317



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/328 (14%), Positives = 92/328 (28%), Gaps = 45/328 (13%)

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG-TDKPDLRNPIIMHNVTEHFV 307
           I+     ++R  +E F+N   +  +   +                      +    + ++
Sbjct: 129 IMKIRNEIIRASYEFFNNEGFIKIDPPILTGSAPEGTTELFHTKYFDEDAFLSQSGQLYM 188

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESG 367
            +    F K+ S  P +      A+     R   +          +P +A+         
Sbjct: 189 EAAAMAFGKVFSFGPTFR-----AEKSKTRRHLIEFW------MIEPEMAFYQLEDSLKV 237

Query: 368 NVAGMGPVAK------HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
               +  + K       L +         L+            + ++             
Sbjct: 238 QEQYVAFLVKAVLDNCKLELERLGRDVSVLESMTAPFPRITYTEAIEKLHELGFDDIEWG 297

Query: 422 QELGIINC----NCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            + G  +     + FE   +I  +P             A  PF MP+             
Sbjct: 298 DDFGAPHETAIADSFEKPVFITHYP------------KAIKPFYMPEDPDNEQVVLCADM 345

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           I    Y       EI  G  R H   V+L+      +     E  +       + G  PH
Sbjct: 346 IAPEGY------GEIIGGSERIHDLGVLLERMKEHELD----EKAYSWYIDLARYGSVPH 395

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            G   G++R V  + G ++VRE   FP 
Sbjct: 396 SGFGLGLERTVAWISGTEHVRETIPFPR 423


>gi|289641085|ref|ZP_06473253.1| lysyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289509026|gb|EFD29957.1| lysyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 478

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 74/346 (21%), Positives = 135/346 (39%), Gaps = 22/346 (6%)

Query: 4   YRTHSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           YRT S       +  G+ VRL+G V   R  GG+IF  I+D  G  QV  + D      A
Sbjct: 8   YRTDSVAAGAREAPDGTPVRLAGRVVLWRRMGGLIFGHIQDRSGRVQVSLSRDELG---A 64

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++R        G  +  +          G+  ++   + +L+      LP   +     
Sbjct: 65  DTIREWSRALKIGDFVGVAGRLYTTR--RGERTVAVSDLTVLNRT-ARALPDKWQGLSNV 121

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDF 180
             R++ R+LDL   D        RT+ I  +R  +   +F+E  TPIL  A+S   AR F
Sbjct: 122 EARYRRRYLDLLVNDESRARFRTRTKAIQRIRRFLDDNDFLEVETPILQEAASGAAARPF 181

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +         FY L  +P+ + + ++   FDR +++   FR+E   S     EF  L+  
Sbjct: 182 VTHHNALDEDFY-LRISPETFLKRVVVGSFDRVYELGRNFRNEGMDSS-HLQEFTMLEWY 239

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ +  D +  +  ++  V ++             + Y+     +G D P+L   + + 
Sbjct: 240 AAYWDYRDNMAFVRELILAVLDDVLG-------TRTVTYEGVKLDFGADWPELDYRVEVA 292

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
             T      +  V   + ++        +  +      A  D + +
Sbjct: 293 RRT----GIDLAVVRDLPTLRERVAGLGLDVENAPSYAALVDLLYK 334



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 44/120 (36%), Gaps = 10/120 (8%)

Query: 455 AHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
            H+P       +  L + +D    +   + +V NG+EI                      
Sbjct: 348 VHHP-----AELVPLARRSDDDPTRLDMFQVVVNGWEIVKAYSELVDPAEQRTRLEEQAE 402

Query: 514 SKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +E  ++           A + GMPP  G+  GIDR   LL  A  +R+V LFP  +   
Sbjct: 403 LREAGDDETMMLEEDFIEAMEYGMPPMSGLGLGIDRFTALLTDAPTLRDVVLFPTMRGAR 462


>gi|259650774|dbj|BAI42936.1| lysyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 499

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 72/339 (21%), Positives = 133/339 (39%), Gaps = 36/339 (10%)

Query: 2   HRY-RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTHS   +             +    V ++G +   R  G + F DIRD  G  Q+
Sbjct: 36  HRFDRTHSAAKVREEFGEDDKETLLEEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 95

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    E     +   +    G ++  S E +     +G++ + A  +  L+ A   
Sbjct: 96  YVRKDVVGDENYMIFKKADL----GDILGISGEVM--KTDSGELTVKANHVTHLAKALR- 148

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           +++ R+LDL  +       VKRT+I++++R  +    F+E  TP+L
Sbjct: 149 PLPDKWHGLTDVEQKYRKRYLDLISNPDSFDRFVKRTKIVSAVREYLDNHGFLEVETPVL 208

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + L+  G +R ++I   FR+E   + 
Sbjct: 209 HNQAGGANARPFITHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTK 267

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF +L+   ++ +  D++   E + R    +  +   ++              Y  
Sbjct: 268 HNP-EFTELETYAAYWDLSDVMVETEGIFRFAAHKVLDSGKLT--------------YQG 312

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
              DL  P    N+ +         F   +SV+   ++ 
Sbjct: 313 MDIDLDAPFARINMLDAIKDKTGVDFWPEMSVDEARKLA 351



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 14/153 (9%)

Query: 421 AQELGIINCNCFEFCWIMD------FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           A++L   +   +E  W +       F  +  +   +      +P  +    +      D 
Sbjct: 347 ARKLADDHEVHYEPYWKVGHIISAFFDQFVESTLIQPTFITGHPIEVSP--LAKKNPKDP 404

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
             +   +++L   G E A+     +      Q F      K        G       A +
Sbjct: 405 RFV--ERFELFVGGGEYANAFTELNDPIDQRQRFEAQAAEKTAGNEEAQGIDDDYVEALE 462

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 463 YGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 495


>gi|71897687|ref|ZP_00679932.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Ann-1]
 gi|71732590|gb|EAO34643.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Ann-1]
          Length = 506

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 61/303 (20%), Positives = 120/303 (39%), Gaps = 24/303 (7%)

Query: 4   YRTHSCGDLGVSDVGSF-------------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
            R H   D+  +                  VR++G +   R  G   F  I+D  G  Q+
Sbjct: 40  KREHYAADVQAAFANVETWTAETLEASSHRVRMAGRLMAKRLMGKASFAQIQDESGRIQL 99

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
           +   +    +   + +   V    G +++           TG++ +    + +L+ A   
Sbjct: 100 LIQSNVLGEDSYAAFKVLDV----GDIIAVEGGL--TRTRTGELSVKVNVLRLLTKALR- 152

Query: 111 PLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           R++ R++DL       +  +KR++II ++R  + A  F+E  TP++
Sbjct: 153 PLPDKWHGLTDVEQRYRQRYVDLIVTPESREIFIKRSKIIRALRTWLDARLFLEVETPMM 212

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   A+ F+          Y L  AP+ Y + L+  G +R ++I   FR+E   + 
Sbjct: 213 HYIPGGAAAKPFVTYHNALDLELY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTR 271

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  L++  ++    ++++  E ++R   +       V  +  +I      RR+  
Sbjct: 272 HNP-EFTMLELYEAYSTYHEVMDLAETMIRDTAQSVLGTTQVIWDGAQIDLGPIFRRWRM 330

Query: 289 DKP 291
           D  
Sbjct: 331 DDA 333



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
           + +D+ S    +++L  NG EIA+G    +  E     F     +KE  ++         
Sbjct: 403 RESDIESGYTDRFELFINGKEIANGFSELNDPEEQAMRFQKQVEAKEGGDDEAMYYDADY 462

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  G+DR+VMLL G+ ++R+V LFP
Sbjct: 463 IRALEYGMAPTGGLGIGVDRLVMLLTGSTSIRDVLLFP 500


>gi|160932786|ref|ZP_02080175.1| hypothetical protein CLOLEP_01627 [Clostridium leptum DSM 753]
 gi|156867860|gb|EDO61232.1| hypothetical protein CLOLEP_01627 [Clostridium leptum DSM 753]
          Length = 503

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 66/297 (22%), Positives = 120/297 (40%), Gaps = 21/297 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
                  V ++G +   R  G   F+DI D  G  QV    +    E+ + +    +  I
Sbjct: 60  EELENQDVCVAGRIMSWRDMGKASFIDIHDRTGRIQVYLRINDLGEEVYRGLDKWDIGDI 119

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
                  S +        G+I + A+++ +LS +                +R++ R++DL
Sbjct: 120 ------ASVKGFVFRTRRGEISIHAKEVRLLSKSLLPLPD-KFHGLTNTDLRYRQRYVDL 172

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +   K+  +KR++II S+R  +   +FIE  TPIL T      AR F+          
Sbjct: 173 IVNPEVKDTFIKRSQIIKSIREDLDNLDFIEVETPILNTIPGGAAARPFITHHNTLDIDL 232

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  G +R ++I   FR+E       P EF  +++  ++ + + ++ 
Sbjct: 233 Y-LRIAPELYLKRLIVGGMERVYEIGRLFRNEGMDVKHNP-EFTTIELYQAYTDYNGMME 290

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY-GTDKPDLRNPII 298
             EN++     +      +S           F R+   DA++   G D    R    
Sbjct: 291 LTENLIHSAAIKVCGTEEISYGGQPVSLALPFKRVTMIDAVKEATGIDFGAFRGDTE 347



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 67/195 (34%), Gaps = 36/195 (18%)

Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI------AQELGI-----INCNCFEFC 435
           +   +    G       GD  K    A + R  I         L +     +     +  
Sbjct: 327 MIDAVKEATGIDFGAFRGDTEKAREAAKELRLEIKESDTWGNILNLAFEEKVEDTLIQPT 386

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           ++ D+P               +P T  + GM  L           +++L   G E A+  
Sbjct: 387 FVCDYP------------IEVSPLTKKKKGMPEL---------VERFELFITGREFANAY 425

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
              +      + F      +E  ++           A + GM P GG+  GIDR+ MLL 
Sbjct: 426 SELNDPIDQRERFLRQAALREAGDDEANMLDEDFLTALEYGMAPTGGMGMGIDRLAMLLT 485

Query: 552 GAKNVREVSLFPMSQ 566
            + ++R+V LFP  +
Sbjct: 486 DSASIRDVLLFPTMK 500


>gi|296134907|ref|YP_003642149.1| lysyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295795029|gb|ADG29819.1| lysyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 506

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 64/290 (22%), Positives = 120/290 (41%), Gaps = 20/290 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +   G  VR++G +   R  G   F  ++D  G  Q+  + D    E   + +   +   
Sbjct: 59  LEAAGVRVRVAGRMMLKRVMGKASFATLQDGTGRIQIHVSNDVTGEEAHAAFKHYDLGDW 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G       E +     TG++ + A+++ +L  +   PLP           R++ R++DL
Sbjct: 119 IGC------EGVLFKTRTGELTIRAEQVRLLVKSLR-PLPDKFHGLEDVETRYRQRYVDL 171

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
                  +    R++ I ++R  M+A  F+E  TP+L        A+ F+          
Sbjct: 172 IVTPESRERFALRSKAIAALRNEMLAAGFMEVETPMLHPIPGGAAAKPFITHHNALDQQM 231

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D ++
Sbjct: 232 Y-LRIAPELYLKRLLVGGFERVFEINRNFRNEGL-SPRHNPEFTMMEFYAAWWTYRDQMD 289

Query: 252 TMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
             E ++R   +       +++          F R+    AI+++  D  D
Sbjct: 290 FTEALIRNTAQLTCGTAVLTHQGRTLDLSAPFARLTLTQAIQKHAPDYTD 339



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 27/155 (17%)

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  + ++  +     +E  +I+D+P                            + +
Sbjct: 369 LGALQLALFEQ--VAEHLLWEPTFIVDYP---------------------VEVSPLARAS 405

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRA 528
           D  +    +++L   G EIA+G    +  E     F +   +KE  ++          +A
Sbjct: 406 DADANTTERFELFITGREIANGFSELNDPEDQAARFQSQVQAKEAGDDEAMYFDADYVQA 465

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            + GMPP GG   GIDR+VMLL  A ++R+V LFP
Sbjct: 466 LEYGMPPAGGCGIGIDRLVMLLTDAPSIRDVILFP 500


>gi|241890039|ref|ZP_04777337.1| lysyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863661|gb|EER68045.1| lysyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 499

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 63/359 (17%), Positives = 137/359 (38%), Gaps = 43/359 (11%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   ++           + +    V ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHLSNEIVAEYDKYSKEELEEKNISVTIAGRIMTKRGKGKAGFAHVQDLGGQVQIYVRQ 99

Query: 55  DSAC--FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           D     +E  K++    ++ + G++   +          G++ + A + EIL+ A   PL
Sbjct: 100 DRVGDSYEYFKTLDLGDIVGVTGVLFKTNV---------GELSVKADEFEILTKALR-PL 149

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA 171
           P           R++ R++DL  +   K   + R++II  MR  +    ++E  TP++ +
Sbjct: 150 PDKFHGLKDVEERYRRRYVDLIMNEESKETFILRSKIIQIMRSYLNERGYLEVETPMMHS 209

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +    AR F+          + +  A +   + L+  G ++ ++I   FR+E   +   
Sbjct: 210 VAGGAAARPFVTHHNALDMQLF-MRIALELPLKRLIVGGLEKVYEIGRAFRNEGVSTRHN 268

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  +++  ++ + +DI++  E+++  +  E                      YG D+
Sbjct: 269 P-EFTMIELYEAYADYNDIMDLTESMIAYICNEIHGTTK--------------VMYGEDE 313

Query: 291 PDL---RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
            DL      + M +  +     +F         +   +   +P +         +   E
Sbjct: 314 IDLTPKWRRVHMVDAIKEVTGVDFWPEMTDEQAHALAKEHNVPVRKDMKVGHIINEFFE 372



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 4/93 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMP 534
             +++L     E A+     +      + F +    K+     V         A + GMP
Sbjct: 406 TDRFELFIVRREHANAFSELNDPIDQKERFLSQMDEKDAGNEEVYEMDEDFVEALEYGMP 465

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           P GG+  GIDR+VMLL  + ++R+V LFP  ++
Sbjct: 466 PTGGLGIGIDRLVMLLTNSASIRDVLLFPYMKH 498


>gi|118575444|ref|YP_875187.1| aspartyl/asparaginyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118193965|gb|ABK76883.1| aspartyl/asparaginyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 522

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 76/257 (29%), Positives = 122/257 (47%), Gaps = 12/257 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           RTH    LG S  G  V + GWV  VR HG I F+ IRD  G  QVVA   S   E    
Sbjct: 99  RTHYSSGLGPSMDGKDVTVMGWVMAVRGHGAISFMTIRDRDGRIQVVAKSGSCPDETRER 158

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
              ++   V+ + G V +         ++  ++++ A   +I       P     +    
Sbjct: 159 ISGLKPHSVVAVTGTVRASEKAPSGFELVPNELKVFADVQKI------PPFEPQAKTVKN 212

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              R + R +DLRRD L +    R+ ++   R       F+E STP + +++ EG     
Sbjct: 213 IETRLEIRPIDLRRDALLELFHARSAVLRETREYFYENGFVEASTPKMISTATEGGAALF 272

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                N+ +F A  Q+PQ YK+ L  S  +R F+I P FR E  R++R   E   +D+E 
Sbjct: 273 PIFYYNKEAFLA--QSPQLYKEQLTMS-LERVFEIGPIFRAEPSRTNRHLAEAISIDLEE 329

Query: 242 SFVEQDDILNTMENVLR 258
           +FV+ +DI++ + ++++
Sbjct: 330 AFVDYNDIMDRISDIVK 346



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 70/205 (34%), Gaps = 39/205 (19%)

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD------PLKFCSFA-----ADARNHIAQE 423
           +   ++ +   A         G    F   D         +         A A+     +
Sbjct: 337 IMDRISDIVKRAASAATPYAGGPGAQFAVPDVPAEIPRYTYADLLDRIKGAGAKAEWGDD 396

Query: 424 L---GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           L    +       F +I D+P                PF +  G              + 
Sbjct: 397 LYPSALKKAGLEGFYFITDWP------------AGPKPFYVKVG---------PDGRTSE 435

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +DL+    EI+SG  R      + +  +  G++       FG    AF  G+PPH G  
Sbjct: 436 SFDLMFGDLEISSGSTRIDNRAELEERMAAKGMNAGS----FGHHLAAFDYGVPPHAGCG 491

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G++R++M L G +N+R+V+ +P  
Sbjct: 492 IGLERLMMALTGTENIRDVTFYPRD 516


>gi|258509503|ref|YP_003172254.1| Lysyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257149430|emb|CAR88403.1| Lysyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 498

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 72/339 (21%), Positives = 133/339 (39%), Gaps = 36/339 (10%)

Query: 2   HRY-RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTHS   +             +    V ++G +   R  G + F DIRD  G  Q+
Sbjct: 35  HRFDRTHSAAKVREEFGEDDKETLLEEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 94

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    E     +   +    G ++  S E +     +G++ + A  +  L+ A   
Sbjct: 95  YVRKDVVGDENYMIFKKADL----GDILGISGEVM--KTDSGELTVKANHVTHLAKALR- 147

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           +++ R+LDL  +       VKRT+I++++R  +    F+E  TP+L
Sbjct: 148 PLPDKWHGLTDVEQKYRKRYLDLISNPDSFDRFVKRTKIVSAVREYLDNHGFLEVETPVL 207

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + L+  G +R ++I   FR+E   + 
Sbjct: 208 HNQAGGANARPFITHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTK 266

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF +L+   ++ +  D++   E + R    +  +   ++              Y  
Sbjct: 267 HNP-EFTELETYAAYWDLSDVMVETEGIFRFAAHKVLDSGKLT--------------YQG 311

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
              DL  P    N+ +         F   +SV+   ++ 
Sbjct: 312 MDIDLDAPFARINMLDAIKDKTGVDFWPEMSVDEARKLA 350



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 14/153 (9%)

Query: 421 AQELGIINCNCFEFCWIMD------FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           A++L   +   +E  W +       F  +  +   +      +P  +    +      D 
Sbjct: 346 ARKLADDHEVHYEPYWKVGHIISAFFDQFVESTLIQPTFITGHPIEVSP--LAKKNPKDP 403

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
             +   +++L   G E A+     +      Q F      K        G       A +
Sbjct: 404 RFV--ERFELFVGGGEYANAFTELNDPIDQRQRFEAQAAEKTAGNEEAQGIDDDYVEALE 461

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 462 YGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 494


>gi|224283778|ref|ZP_03647100.1| lysyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|310287955|ref|YP_003939214.1| Lysyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|313140932|ref|ZP_07803125.1| lysyl-tRNA synthetase 1 [Bifidobacterium bifidum NCIMB 41171]
 gi|309251892|gb|ADO53640.1| Lysyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|313133442|gb|EFR51059.1| lysyl-tRNA synthetase 1 [Bifidobacterium bifidum NCIMB 41171]
          Length = 563

 Score =  199 bits (506), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 106/585 (18%), Positives = 198/585 (33%), Gaps = 135/585 (23%)

Query: 1   MHRYRTH-----SCGDLGVSDVGS---------FVRLSGWVHRVRPHGGIIFLDIR--DH 44
           M  Y  H     +   +     G           V ++G V  +R  GG+ F+ +   D 
Sbjct: 84  MQPYPVHLDVTDTIEAVRAKYDGKLEAGQETEDVVGIAGRVLFLRNGGGLCFVQLSAGDG 143

Query: 45  YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL 104
             I  +++  +      A S++    L   G  +      I +   TG++ + A +  I 
Sbjct: 144 TKIQGMISKKEIG----ADSLKQFKQLVDLGDHLYLRGRVIASK--TGELSVFATEWAIA 197

Query: 105 SVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIE 163
           S A +    +   ++  +  R +  ++ +  D   +N+V+ R++ + S+R      +F+E
Sbjct: 198 SKALQPLPAL--HKDLNDDTRTRKPYIGMIADEKVRNMVRNRSKAVASLRRTFDDHDFLE 255

Query: 164 CSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
             TP+L T      AR F           Y L  AP+ + +  +  G DR F+I   FR+
Sbjct: 256 VETPMLQTIHGGAAARPFTTHMNAFDLDLY-LRIAPELFLKRCLVGGIDRVFEINRDFRN 314

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           E   +   P EF  ++   ++       +T+  +++ + ++                  A
Sbjct: 315 EGVDATHAP-EFTMVEAYQAYGT----YDTIGQLVKELVQK-----------------TA 352

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +  +G+ K      + + + TE+     ++  S   S++       +P  G        +
Sbjct: 353 MDVFGSHK------VTLLDGTEYDFGGNWKTISMYDSLSEALGEEIVPNGGPDNPGTSVE 406

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            + E A   G            E  +V   G + +HL                       
Sbjct: 407 HLGEIADKLG-----------VERDDVENHGKLVEHLWEH-------------------- 435

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
                                        +E  ++ DFP      E   +   H      
Sbjct: 436 -----------------------FYEDKLYEPTFVRDFPV-----ETSPLVKGHR----- 462

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
                        +    ++DL   GFE+A+G    +   V  + F          +   
Sbjct: 463 -----------NKAGVVEKWDLYVRGFELATGYSELNDPIVQRERFVAQAKDALAGDEEA 511

Query: 523 ----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                    A   GMPP GG+  GIDR+++ L GA  +RE   FP
Sbjct: 512 CDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETITFP 555


>gi|110598631|ref|ZP_01386897.1| lysyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110339743|gb|EAT58252.1| lysyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 514

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 65/311 (20%), Positives = 122/311 (39%), Gaps = 29/311 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            +    V ++G +  +R  G   F  I+D  G  Q+    D    E+  +    + L   
Sbjct: 64  EEAKEPVAVAGRIMTIRKMGKASFFHIQDSKGKIQIYLKKD----EVGDTAYDTFKLLDI 119

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE----------SI 124
           G ++     T      TG+I + A+  E+LS +         +    E            
Sbjct: 120 GDIVGVKGYTF--KTRTGEISVHAESFELLSKSLRPIPVPKEKEVDGEKVVFDAFSDREQ 177

Query: 125 RFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLV 182
           R++ R++DL     + +  +KR+ +++ MR    ++ ++E  TPIL        AR F  
Sbjct: 178 RYRQRYVDLIVNPEVRQTFIKRSAVVSFMRQFFSSQGWLEVETPILQPIYGGAAARPFTT 237

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y L  A + Y + L+  GFD  F+ A  FR+E       P EF Q+++ ++
Sbjct: 238 HHNALDMELY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEGIDRFHNP-EFTQVELYVA 295

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDL 293
           + + + ++  +E +      E +                 F R+   DAI  Y       
Sbjct: 296 YKDYNWMMELVEELFYRTALEVNKSEVTLFLGNEISLKPPFKRLSIIDAIEEYCGKNIRG 355

Query: 294 RNPIIMHNVTE 304
           ++ + + NV +
Sbjct: 356 KSEVELRNVAK 366



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 7/156 (4%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           + RN +A++LG+          I+D  F E+ E   K+         P       K +  
Sbjct: 360 ELRN-VAKDLGLELDPKISSGKIIDEIFGEFVE--PKLIQPTFITDYPTEMSPLAKEHRS 416

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++L+  G E+ +     +   V  +   +    ++  +           RA +
Sbjct: 417 QPGIVERFELIVGGKEVCNSFSELNDPVVQRERLESQAKLRQRGDEEAMIVDEDFLRALE 476

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GMPP  G+  GIDR+VML+ G  ++R+V  FP  +
Sbjct: 477 YGMPPCAGLGIGIDRMVMLITGQDSIRDVIFFPHMK 512


>gi|199598782|ref|ZP_03212194.1| Lysyl-tRNA synthetase (class II) [Lactobacillus rhamnosus HN001]
 gi|199590287|gb|EDY98381.1| Lysyl-tRNA synthetase (class II) [Lactobacillus rhamnosus HN001]
          Length = 498

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 72/339 (21%), Positives = 133/339 (39%), Gaps = 36/339 (10%)

Query: 2   HRY-RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTHS   +             +    V ++G +   R  G + F DIRD  G  Q+
Sbjct: 35  HRFDRTHSAAKVREEFGEDDKETLLEEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 94

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    E     +   +    G ++  S E +     +G++ + A  +  L+ A   
Sbjct: 95  YVRKDVVGDENYMIFKKADL----GDILGISGEVM--KTDSGELTVKANHVTHLAKALR- 147

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           +++ R+LDL  +       VKRT+I++++R  +    F+E  TP+L
Sbjct: 148 PLPDKWHGLTDVEQKYRKRYLDLISNPDSFDRFVKRTKIVSAVREYLDNHGFLEVETPVL 207

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + L+  G +R ++I   FR+E   + 
Sbjct: 208 HNQAGGANARPFITHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTK 266

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF +L+   ++ +  D++   E + R    +  +   ++              Y  
Sbjct: 267 HNP-EFTELETYAAYWDLSDVMVETEGIFRFAAHKVLDSGKLT--------------YQG 311

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
              DL  P    N+ +         F   +SV+   ++ 
Sbjct: 312 MDIDLDAPFARINMLDAIKDKTGVDFWPEMSVDEARKLA 350



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 58/153 (37%), Gaps = 14/153 (9%)

Query: 421 AQELGIINCNCFEFCWIMD------FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           A++L   +   +E  W +       F  +  +   +      +P  +    +      D 
Sbjct: 346 ARKLADDHEVHYEPYWKVGHIISAFFDQFVESTLIQPTFITGHPIEVSP--LAKKNPKDP 403

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
             +   +++L   G E A+     +      Q F      K        G         +
Sbjct: 404 RFV--ERFELFVGGGEYANAFTELNDPIDQRQRFEAQAAEKTAGNEEAQGIDDDYVEVLE 461

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 462 YGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 494


>gi|237755721|ref|ZP_04584328.1| lysyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692113|gb|EEP61114.1| lysyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 577

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 69/331 (20%), Positives = 131/331 (39%), Gaps = 21/331 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +  +R  G   F  I+D  G  QV  N D+   E  K  ++  ++ I  ++ 
Sbjct: 138 KQVAVAGRLIALRDQGKAAFGHIQDADGKLQVYFNADTLREENYK--KAMDLIDIGDII- 194

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               E      +TG++ +     EIL+ +   PLP           R++YR+LDL  +  
Sbjct: 195 --GVEGHLFRTMTGELTVEVHNYEILAKSLR-PLPEKWHGLKDTEYRYRYRYLDLIANQR 251

Query: 139 HKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQ 196
            + I   R++ I S+R  + ++ FIE  TPIL   +    A+ F+        + Y L  
Sbjct: 252 TREIFKIRSKAIKSLREFLESKGFIEVETPILQPVASGAMAKPFITYHNALDMNLY-LRI 310

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y ++L+  GF++ F+I   FR+E   +   P EF  ++   ++++ +D++   E +
Sbjct: 311 APELYLKMLVVGGFNKVFEIGRNFRNEGIDTTHNP-EFTMVEFYAAYLDYNDLMVLTEEL 369

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
            R +  +                         D       +   +  +     +   F  
Sbjct: 370 FRKILLDTVG-----------TLKITWEGQELDFEKPFRKVSFFDALKQKTGKDKEFFLD 418

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
                   +   IP      +    D++ E 
Sbjct: 419 FEKARNFAKEVGIPKADTLTHAKILDKLFEH 449



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/174 (24%), Positives = 68/174 (39%), Gaps = 13/174 (7%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+     G   +F      ARN  A+E+GI   +      I+D   +E   EE  +    
Sbjct: 403 DALKQKTGKDKEFFLDFEKARN-FAKEVGIPKADTLTHAKILDK-LFEHFVEEDLVQPTF 460

Query: 457 ---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF----S 509
               P  +           DL+     +++L+ N  E+A+     +      + F     
Sbjct: 461 VIDFPKILSPLAKTHRSYPDLV----ERFELIINKKELANAYTELNDPMDQRERFIQQIR 516

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              +  E   +       A + G+PP  G   GIDR+VM+L    ++REV LFP
Sbjct: 517 EKEMGDEEAMDVDETFLTALEYGLPPTAGEGIGIDRLVMMLTDNYSIREVILFP 570


>gi|71276051|ref|ZP_00652332.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Dixon]
 gi|71899473|ref|ZP_00681631.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Ann-1]
 gi|170729665|ref|YP_001775098.1| lysyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|238687952|sp|B0U572|SYK_XYLFM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71163134|gb|EAO12855.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Dixon]
 gi|71730786|gb|EAO32859.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Ann-1]
 gi|167964458|gb|ACA11468.1| lysyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 506

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 61/303 (20%), Positives = 121/303 (39%), Gaps = 24/303 (7%)

Query: 4   YRTHSCGDLGVSDVGSF-------------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
            R H   D+  +                  VR++G +   R  G   F  I+D  G  Q+
Sbjct: 40  KREHYAADVQAAFANVETWTAETLEASSHRVRMAGRLMAKRLMGKASFAQIQDESGRIQL 99

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
           +   +    +   + +   V    G +++           TG++ +    + +L+ A   
Sbjct: 100 LIQSNVLGEDSYAAFKVLDV----GDIIAVEGGL--TRTRTGELSVKVNVLRLLTKALR- 152

Query: 111 PLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           R++ R++DL       +  +KR++II ++R  + A  F+E  TP++
Sbjct: 153 PLPDKWHGLTDVEQRYRQRYVDLIVTPESREIFIKRSKIIRALRTWLDARLFLEVETPMM 212

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   A+ F+          Y L  AP+ Y + L+  G +R ++I   FR+E   + 
Sbjct: 213 HYIPGGAAAKPFVTYHNALDLELY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTR 271

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  L++  ++    ++++  E ++R   +       V  +  +I      RR+  
Sbjct: 272 HNP-EFTMLELYEAYSTYHEVMDLAETMIRDTAQSVLGTTQVIWDGAQIDLGPIFRRWRM 330

Query: 289 DKP 291
           D+ 
Sbjct: 331 DEA 333



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
           + +D+ S    +++L  NG EIA+G    +  E     F     +KE  ++         
Sbjct: 403 RESDIESGYTDRFELFINGKEIANGFSELNDPEEQAMRFQKQVEAKEGGDDEAMYYDADY 462

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  G+DR+VMLL G+ ++R+V LFP
Sbjct: 463 IRALEYGMAPTGGLGIGVDRLVMLLTGSTSIRDVLLFP 500


>gi|226941342|ref|YP_002796416.1| lysyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|254782474|sp|C1DB68|SYK_LARHH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226716269|gb|ACO75407.1| Syk [Laribacter hongkongensis HLHK9]
          Length = 503

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 120/284 (42%), Gaps = 20/284 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F  ++D  G  Q   + D    ++    ++  +  I G    
Sbjct: 67  EVVVAGRMMLKRVMGKASFATVQDSSGRIQFYISRDKVGEDVYADFKTWDMGDILG---- 122

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
             A+       TG++ +   ++ +LS +   PLP        +  +++ R++DL  +   
Sbjct: 123 --AKGTLMKTKTGELSVEVSELRLLSKSLR-PLPDKFHGLADQEQKYRQRYVDLIINQDS 179

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
           ++  +KR++I+ ++R  M+ E+++E  TP++        A+ F+          Y L  A
Sbjct: 180 RDTFIKRSKIVQTVREVMVGEDYLEVETPMMHPIPGGAAAKPFVTHHNALDMPLY-LRIA 238

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  G +R F+I   FR+E   +   P EF  ++   ++   + ++   E ++
Sbjct: 239 PELYLKRLVVGGLERVFEINRNFRNEGMSTRHNP-EFTMIEFYEAYCGYERMMEMTEKII 297

Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           R   E       V+ N         F R     AI+ Y     D
Sbjct: 298 RRCAEAACGTTKVTYNGKEVDLGKPFDRFTIVGAIKHYNPQYTD 341



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 27/157 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
              +  + +E        +   +I+D+P                            +G+D
Sbjct: 368 GSLQLALFEEC--AEGKLWNPTFIIDYP---------------------VEVSPLARGSD 404

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAF 529
                  +++L   G E A+G    +  E     F +    K+  ++          RA 
Sbjct: 405 ADPSITERFELFIVGREHANGYSELNDPEDQAARFRSQVEQKDAGDDEAMHYDADYIRAM 464

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + G+PP GG   GIDR+VMLL  A ++R+V LFP  +
Sbjct: 465 EYGLPPTGGCGIGIDRLVMLLTDAPSIRDVILFPHMR 501


>gi|194766780|ref|XP_001965502.1| GF22422 [Drosophila ananassae]
 gi|190619493|gb|EDV35017.1| GF22422 [Drosophila ananassae]
          Length = 580

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 95/568 (16%), Positives = 172/568 (30%), Gaps = 109/568 (19%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
            ++G VH +R  G  +IF D+R      QV+A+  S   E  K    +      G ++  
Sbjct: 115 SVAGRVHAIRESGAKLIFYDLRGEGVKLQVMASAKSYKSE--KDFEVDTAKLRRGDIIGV 172

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLH 139
                      G++ +   +I++LS      LP        +  R++ R+LDL   + + 
Sbjct: 173 VG--HPGKTKKGELSVMPTEIQLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNNKVR 229

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           +N   R +II+ +R  +    F+E  TP++   +        V    +      +  AP+
Sbjct: 230 ENFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNDLKMDLFMRIAPE 289

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y ++L+  G DR ++I                                           
Sbjct: 290 LYHKMLVVGGLDRVYEIG------------------------------------------ 307

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
              +F N      +       +    Y              +  +    +E  V   + S
Sbjct: 308 --RQFRNEGIDLTHNPEFTTCEFYMAYA-------------DYADIMDITEQLVSGMVKS 352

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
           +   Y++   P  G  G     D    + R      L            +    P A   
Sbjct: 353 IRGSYKITYHP-DGPEGPEQELDFTPPFKRVSMIKTL---------EEKLGVQFPSADTF 402

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
           N   T     +L ++           P               +E  +         +I++
Sbjct: 403 NTPATNQFLSQLCVKH----QVECPAPRTTARLLDKLVGEFIEEFCV------NPTFIIE 452

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
                            +P  M             +     +++L     EI +     +
Sbjct: 453 -----------------HPQIMSPLAKYHRS----IPGLTERFELFVAKKEICNAYTELN 491

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
              V  + F      K   ++           A + G+PP GG   GIDR+ M L  + N
Sbjct: 492 DPVVQRERFEQQASDKAAGDDEAQLVDENFCTALEYGLPPTGGFGMGIDRLAMFLTDSNN 551

Query: 556 VREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
           ++EV LFP  +        +P T    Q
Sbjct: 552 IKEVLLFPAMKPEEANRTAAPETTPAPQ 579


>gi|291613966|ref|YP_003524123.1| lysyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291584078|gb|ADE11736.1| lysyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 500

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 60/311 (19%), Positives = 121/311 (38%), Gaps = 32/311 (10%)

Query: 4   YRTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL  ++ G             V ++G +   R  G   F  ++D  G  Q+  
Sbjct: 38  KREHMAADLH-AEFGEKSHDELEAAQVHVAVAGRMMLKRVMGKASFATVQDMSGRIQLFI 96

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           + D          +   +  I G V       +     +G++ +   ++ +L+ A   PL
Sbjct: 97  SNDITGEAAHSEFKHYDMGDILGAV------GVLFKTKSGELSVRVTQVRLLTKALR-PL 149

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA 171
           P           +++ R+LDL  +   +   + RT+II ++R   +   ++E  TP++  
Sbjct: 150 PEKFHGLTDMEQKYRQRYLDLITNEQSRKVFIARTQIIQAIREFFVRHGYLEVETPMMHP 209

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 A+ F+          Y L  AP+ Y + L+  GF++ F++   FR+E   +   
Sbjct: 210 IPGGASAKPFVTHHNALDLQMY-LRIAPELYLKRLVVGGFEKVFEVNRNFRNEGVSTRHN 268

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDD 281
           P EF  ++   ++ +   +++  E +   V  +      ++           F R+    
Sbjct: 269 P-EFTMIEFYEAYRDYKYLMDFSEKLFAEVARKVLGTTVITYQGKELDLGKPFHRLTMVQ 327

Query: 282 AIRRYGTDKPD 292
           AI++Y     D
Sbjct: 328 AIQKYHPQFTD 338



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 63/160 (39%), Gaps = 27/160 (16%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                 +  + +EL     + FE  +I+D+P                            +
Sbjct: 362 DAVGGLQLSLFEEL--AEAHLFEPTFIIDYP---------------------VEVSPLAR 398

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LY 526
            +D       +++L   G EIA+G    + +E   + F     +K+  +           
Sbjct: 399 SSDARPEITERFELFIVGREIANGFSELNDAEDQERRFDAQVAAKDAGDEEAMFKDNDYV 458

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           RA + G+PP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 459 RALEYGLPPTAGEGIGIDRLVMLLTDSASIRDVILFPHMR 498


>gi|307729219|ref|YP_003906443.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307583754|gb|ADN57152.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 508

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 67/308 (21%), Positives = 119/308 (38%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGV--SDVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL                  V ++G +   R  G   F  +RD  G  Q    P 
Sbjct: 43  THHAEDLQAQFEHADKEALEANPLEVAIAGRMMLKRVMGKASFATVRDGSGQIQFFITPA 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +LS +   PLP  
Sbjct: 103 DVGQETYDAFKKWDMGDI------VAARGVLFRTNKGELSVRCTQLRLLSKSLR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + ++++ R++DL       K  V RT+ I+S+R  M    F+E  TP+L     
Sbjct: 156 FHGLSDQEMKYRQRYVDLIVTPETRKTFVARTKAISSIRKFMADAGFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F           + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFTTHHNALDMQMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SVRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T++           F R+    AI+
Sbjct: 274 FTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTATITYQGRELDLSKPFHRLTITQAIQ 333

Query: 285 RYGTDKPD 292
           +Y     D
Sbjct: 334 KYAPQYTD 341



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +  +     P       + +D +     +++L   G EIA+G    +  
Sbjct: 378 LFEETAESQLWEPTY-IIDYPVEVSPLARASDKVEGITERFELFITGREIANGFSELNDP 436

Query: 502 EVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      K+  +           RA + GMPP GG   GIDR+VM+L  + ++R
Sbjct: 437 EDQAARFKKQVDQKDAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLVMMLTDSPSIR 496

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 497 DVILFP 502


>gi|288556137|ref|YP_003428072.1| asparaginyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288547297|gb|ADC51180.1| asparaginyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 430

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 81/319 (25%), Positives = 124/319 (38%), Gaps = 34/319 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           V   V +  W+   R  G I FL +RD  G  Q   V A      F+ AK++  E  L +
Sbjct: 12  VEQEVTIGAWLANKRSSGKIAFLQLRDGTGFIQGVVVKAEVGEEAFQAAKNLTQESSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V +               EL+  K+E++  A + P+     +E+       +R L L
Sbjct: 72  TGTVRADDR-------APSGYELTVTKVEVIHEATDYPITP---KEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +        +F +   PILT S+PEG  +       ++ ++  
Sbjct: 122 RSKRQHAVMKVRNEIIRATYEFFNQNDFAKVDPPILTGSAPEGTTELFATKYFDEDAY-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ ++ EM+FVE D+ L   
Sbjct: 180 LSQSGQLYMEAA-AMALGRVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEFDESLEIQ 238

Query: 254 ENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRY---GTDKPDLRN 295
           E  +  + +       +                  F RI YDDAI      G D     +
Sbjct: 239 EQYVSYLAKSVLENCQLELKTLGRDTEKLEKVQAPFPRISYDDAITFLHEKGFDDIKWGD 298

Query: 296 PIIMHNVTEHFVHSEFRVF 314
                + T    H +  VF
Sbjct: 299 DFGAPHETAIAEHYDKPVF 317



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 71/224 (31%), Gaps = 37/224 (16%)

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKH------LNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407
           P +A++ +          +  +AK       L +        +L+            D +
Sbjct: 224 PEMAFVEFDESLEIQEQYVSYLAKSVLENCQLELKTLGRDTEKLEKVQAPFPRISYDDAI 283

Query: 408 KFCSFAADARNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
            F             + G      I  +  +  +I  +P             +  PF M 
Sbjct: 284 TFLHEKGFDDIKWGDDFGAPHETAIAEHYDKPVFITHYP------------TSLKPFYMQ 331

Query: 463 QGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
                   +   DL++ + +         EI  G  R H  E++ Q  +   +S +  + 
Sbjct: 332 PDANREDVVLCADLIAPEGYG--------EIIGGSERIHSYELLEQRINEHNLSLDTYQ- 382

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                    + G  PH G   G++R V  L G ++VRE   FP 
Sbjct: 383 ---WYLDLRKYGSVPHSGFGLGLERTVAWLSGVEHVRESIPFPR 423


>gi|253997053|ref|YP_003049117.1| lysyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253983732|gb|ACT48590.1| lysyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 516

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/281 (20%), Positives = 125/281 (44%), Gaps = 16/281 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q+  + D+   E +++V   +     G +++ 
Sbjct: 76  VSIAGRMMLKRVMGKASFATVQDSTGRIQLFVSKDNFTDENSEAVYEAFKHWDLGDIIA- 134

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLH 139
            A+ +     TG++ +   ++ +L+ +   PLP        + ++++ R++DL   +   
Sbjct: 135 -AKGVLFKTKTGELSVKVSELRLLTKSLR-PLPEKFHGLQDQEVKYRQRYVDLMVSEETR 192

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
              + R+++++++R  M+   F+E  TP+L        A+ F+          Y +  AP
Sbjct: 193 ATFMARSKVVSAIRSFMLENQFLEVETPMLHPIPGGASAKPFITHHNALDMQMY-MRIAP 251

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F++   FR+E   S R   EF  ++   ++ +   +++  E  +R
Sbjct: 252 ELYLKRLVVGGFERVFEVNRNFRNEGL-SVRHNPEFTMMEFYAAYTDYLWLMDFTERCIR 310

Query: 259 ---------GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
                     V +       +S  F R+    AI++Y    
Sbjct: 311 AAAIAATGSAVLQYQGRELDLSKPFQRLTIVGAIQKYAPQY 351



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +  +     P       + +D       +++L   G EIA+G    + +
Sbjct: 386 LFEETAESQLWEPTY-IIDYPVEVSPLARASDKNPEITERFELFVTGREIANGFSELNDA 444

Query: 502 EVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F     +KE  +           RA + GMPP GG   GIDR+VM++  + ++R
Sbjct: 445 EDQAARFHAQMKAKEAGDAEAMYYDADFIRALEYGMPPTGGCGIGIDRLVMMITDSPSIR 504

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 505 DVILFPHMR 513


>gi|254413364|ref|ZP_05027135.1| asparaginyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196179984|gb|EDX74977.1| asparaginyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 463

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 73/352 (20%), Positives = 128/352 (36%), Gaps = 51/352 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEI-AKSVRSE 68
           L        V + GWV   R      F+++ D   +   QV+ NPD   ++   + V + 
Sbjct: 10  LRTGQPDETVTIQGWVRTKRELKEFAFMEVNDGSCLANLQVILNPDVPDYQTTLQRVNTG 69

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G+++    +         +IEL A  +++   A+    P+  +R   E +R   
Sbjct: 70  ASVEVAGVLVPSPGKG-------QRIELRANSVQVYGEADPATYPLQKKRHSFEFLR-TI 121

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +T+   +  R    N++        F+   +PI+TAS  EGA +    + +N 
Sbjct: 122 GHLRSRTNTIGAVLRVRNACANAIHQFFQERGFLWIHSPIITASDCEGAGELFTVTNLNL 181

Query: 189 G--------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q +  +MA  F   +   P FR E+  + R  
Sbjct: 182 NEIPKTEDQLVDFSQDFFGRQAYLTVSGQLQAEVMAMTFGNVYTFGPTFRAENSNTSRHL 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS-------------------- 271
            EF+ ++ EM+F +    ++  E  L+ VF                              
Sbjct: 242 AEFWMVEPEMAFCDLQGDMDLAEEFLKYVFSSVLENCPEDMEFFNKRIDNSVLATADNII 301

Query: 272 -NNFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSV 320
            N F RI Y DAI +          P+       +EH  +    +F K + V
Sbjct: 302 NNQFERITYTDAIAQLEKADRKFEYPVEWGTDLQSEHERYLAEELFQKPVIV 353



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 55/189 (29%), Gaps = 32/189 (16%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
           +              ++  D  F    +        ++   ++A+EL        +   +
Sbjct: 302 NNQFERITYTDAIAQLEKADRKFEYPVEWGT--DLQSEHERYLAEELFQ------KPVIV 353

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
            D+P                 F M                 A    L     EI  G  R
Sbjct: 354 SDYP------------VGIKAFYMRLNED--------GKTVAAMDVLAPKIGEIIGGSQR 393

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               +V+ Q   N G++       F       + G   H G   G +R+V  + G  N+R
Sbjct: 394 EERLDVLQQRIQNQGMNP----EEFWWYLDLRRYGTVAHAGFGLGFERLVQFMTGMGNIR 449

Query: 558 EVSLFPMSQ 566
           +V  FP + 
Sbjct: 450 DVIPFPRTP 458


>gi|57234639|ref|YP_181320.1| lysyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|123746105|sp|Q3Z8X9|SYK_DEHE1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|57225087|gb|AAW40144.1| lysyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 498

 Score =  199 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 72/284 (25%), Positives = 129/284 (45%), Gaps = 21/284 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R++G +  +R  G I F+DIRD  G  QV    +       + ++   +    G      
Sbjct: 57  RIAGRIMTLRDMGKISFMDIRDGSGKIQVFCRQNDLDEASIELLKDLDLGDFIG------ 110

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
           AE       TG+  L+A KI  L     LPLP           R++ R+LDL  +   + 
Sbjct: 111 AEGSLMRTRTGEPSLAATKIS-LLSKSLLPLPEKWHGLQDVEKRYRQRYLDLISNADARQ 169

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
               R+++I+++R  M ++ F+E  TP+L   +    AR F+   +     FY +  A +
Sbjct: 170 TFLTRSQVISAIRSFMSSKGFLEVETPVLQPEAGGALARPFITHHQALDCDFY-MRIALE 228

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + L+  GFDR ++I   FR+E   +   P EF  ++   ++ +  D+++ +E ++  
Sbjct: 229 LHLKRLIVGGFDRVYEIGRIFRNEGVSTRHNP-EFTMMESYQAYADYKDVMDFLEEMVSS 287

Query: 260 VFEEFSNGN---------TVSNNFLRICYDDAIRRY-GTDKPDL 293
           V +E S G            +  + R+   DA+++Y G D  D 
Sbjct: 288 VVKEISGGYTVPFGDTTLDFTPPWPRLSMRDAVKQYAGIDFFDF 331



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 9/119 (7%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM-----LQAFSNV 511
           +P  M    +   K  D       +++ +C   EIA+     +           Q     
Sbjct: 379 HPVAMSP--LAKQKPEDPR--LTERFEAICANMEIANAFSELNDPVEQRARFKEQLEKRN 434

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            +  E  E+       A   GMPP GG+  GIDR+VMLL    ++REV LFP  ++  D
Sbjct: 435 QLRTEESESIDEDFLAALAYGMPPTGGLGVGIDRLVMLLTNHDSIREVILFPALKDRED 493


>gi|28198321|ref|NP_778635.1| lysyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182680960|ref|YP_001829120.1| lysyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130167|sp|Q87EB3|SYK_XYLFT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238691085|sp|B2I848|SYK_XYLF2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|28056391|gb|AAO28284.1| lysyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182631070|gb|ACB91846.1| lysyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307579428|gb|ADN63397.1| lysyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 506

 Score =  199 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 61/303 (20%), Positives = 121/303 (39%), Gaps = 24/303 (7%)

Query: 4   YRTHSCGDLGVSDVGSF-------------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
            R H   D+  +                  VR++G +   R  G   F  I+D  G  Q+
Sbjct: 40  KREHYAADVQAAFANVETWTAETLEASSHRVRMAGRLMAKRLMGKASFAQIQDESGRIQL 99

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
           +   +    +   + +   V    G +++           TG++ +    + +L+ A   
Sbjct: 100 LIQSNVLGEDSYAAFKVLDV----GDIIAVEGGL--TRTRTGELSVKVNVLRLLTKALR- 152

Query: 111 PLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           R++ R++DL       +  +KR++II ++R  + A  F+E  TP++
Sbjct: 153 PLPDKWHGLTDVEQRYRQRYVDLIVTPESREIFIKRSKIIRALRTWLDARLFLEVETPMM 212

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   A+ F+          Y L  AP+ Y + L+  G +R ++I   FR+E   + 
Sbjct: 213 HYIPGGAAAKPFVTYHNALDLELY-LRVAPELYLKRLVVGGLERVYEINRNFRNEGVSTR 271

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  L++  ++    ++++  E ++R   +       V  +  +I      RR+  
Sbjct: 272 HNP-EFTMLELYEAYSTYHEVMDLAETMIRDTAQSVLGTTQVIWDGAQIDLGPIFRRWRM 330

Query: 289 DKP 291
           D+ 
Sbjct: 331 DEA 333



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
           + +D+ S    +++L  NG EIA+G    +  E     F     +KE  ++         
Sbjct: 403 RESDIESGYTDRFELFINGKEIANGFSELNDPEEQAMRFQKQVEAKEGGDDEAMYYDADY 462

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GM P GG+  G+DR+VMLL G+ ++R+V LFP
Sbjct: 463 IRALEYGMAPTGGLGIGVDRLVMLLTGSTSIRDVLLFP 500


>gi|40063229|gb|AAR38056.1| lysyl-tRNA synthetase [uncultured marine bacterium 577]
          Length = 501

 Score =  199 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 66/309 (21%), Positives = 124/309 (40%), Gaps = 30/309 (9%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H   DL                  V ++G +   R  G   F  I+D  G  Q+  + 
Sbjct: 39  RNHLASDLHKKYGDQSNDTLEKDPISVEVAGRMILKRVMGKASFATIQDMSGHIQLYISN 98

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D        + +   +  I G+              +G++ +  + + +L+ +   PLP 
Sbjct: 99  DITGESAHAAFKHFDLGDILGVH------GTLFITKSGELTIRVKSLRLLTKSLR-PLPE 151

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  +++ R+LDL  +   + +   R+RII S+R       ++E  TP++    
Sbjct: 152 KFHGLTDQEQKYRQRYLDLISNEDTRKVFLTRSRIIQSIRTFFEERGYLEVETPMMHPIP 211

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+         FY L  AP+ Y + L+ SG ++ F+I   FR+E   +   P 
Sbjct: 212 GGAAARPFITHHNALNMDFY-LRIAPELYLKRLVVSGMEKVFEINRSFRNEGISTRHNP- 269

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAI 283
           EF  L+   ++ +   ++N  E ++R +  +               +SN FLR+    AI
Sbjct: 270 EFTMLEFYEAYQDHIYLMNLTETLIRELAIKVLGTTEISYQGYKINLSNPFLRLSITQAI 329

Query: 284 RRYGTDKPD 292
           +++  +  D
Sbjct: 330 QKFHPEHTD 338



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 53/306 (17%), Positives = 108/306 (35%), Gaps = 45/306 (14%)

Query: 275 LRICYDDA--IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
             I + +A  +  Y    P+L    ++ +  E          ++ +S     E   +   
Sbjct: 218 PFITHHNALNMDFYLRIAPELYLKRLVVSGMEKVFEINRSFRNEGISTRHNPEFTMLEFY 277

Query: 333 GGGGNRAFCDRMNE------WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386
               +  +   + E        +  G   ++Y  ++++ S     +      +     + 
Sbjct: 278 EAYQDHIYLMNLTETLIRELAIKVLGTTEISYQGYKINLSNPFLRLS-----ITQAIQKF 332

Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ-ELGIINCNCFEFC----WIMDFP 441
                D Q  D  + I    L+  + +    + I + +L + +           +I+D+P
Sbjct: 333 HPEHTDAQLNDRAYLI--KKLEALNISYKPEDGIGKLQLSLFDETTEHLLMDPTFIVDYP 390

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
             E +   ++                    ND       +++L   G E+A+G    +  
Sbjct: 391 S-EVSPLARR--------------------NDKNPGVTDRFELYITGREMANGFSELNDP 429

Query: 502 EVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F     +KE       +  G   RA + G+PP  G   GIDR++MLL  + ++R
Sbjct: 430 EDQAARFQEQVRAKESGDKEAMHYDGDYIRALEHGLPPTAGEGIGIDRLIMLLTDSPSIR 489

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 490 DVILFP 495


>gi|313127269|ref|YP_004037539.1| aspartyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312293634|gb|ADQ68094.1| aspartyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 434

 Score =  199 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 90/349 (25%), Positives = 153/349 (43%), Gaps = 43/349 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++      ++ G  V ++GWVH VR  GGI FL +RD  G  Q+    D    E+ + 
Sbjct: 4   RTYTAD----AEPGDSVTVAGWVHEVRDLGGIAFLILRDKSGKIQIKLEKDEMDEELVET 59

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
              V  E V+ + G V             TG +E+  + I++++ A+   PL   G+ + 
Sbjct: 60  GLDVARESVVSVSGDVKEEP------RAPTG-VEVVPEDIDVMAEADTQLPLDPSGKVDA 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
             S R   R LDLR+D +      R  I+ S+R      N  E +TP + A+  EG  + 
Sbjct: 113 ELSTRLDNRTLDLRKDEVKAVFEIRAEILRSVRDAFRGLNATEINTPKIVATGTEGGTEL 172

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   Q +F    Q+PQ +KQL++ SG +R F++ P FR E+  + R   E   +D E
Sbjct: 173 FPITYFGQEAFMN--QSPQLFKQLMVGSGLERVFEVGPIFRAEEHNTPRHLNEATSIDFE 230

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT--------------VSNNFLRICYDDAIRR- 285
            +F +  + ++  E+V++  +E  +                      F R+ Y++AI R 
Sbjct: 231 SAFFDHTEAMDACEHVVKAAYEGVAENCQRELETLGLAEEFEVPEGEFPRLTYEEAIERI 290

Query: 286 -----------YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
                      +G D P      +  +V EH+  +++    K   +   
Sbjct: 291 NATGELDEQLVWGDDLPTEGERALGEDVGEHYFITDWPSEIKPFYIKDH 339



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 77/198 (38%), Gaps = 31/198 (15%)

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI--AQEL-----GIINCNCFE 433
            + T  +    ++ +G+       + ++  +   +    +    +L       +  +  E
Sbjct: 261 ELETLGLAEEFEVPEGEFPRLTYEEAIERINATGELDEQLVWGDDLPTEGERALGEDVGE 320

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             +I D+P                PF         +K +D     +  +D++    E+ S
Sbjct: 321 HYFITDWP------------SEIKPFY--------IKDHDDDETLSTGFDMMHPRMELVS 360

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           GG R H  E ++  F   G+      ++F    + F+ GMPPH G   G +R+VM +LG 
Sbjct: 361 GGQREHRFEHLVAGFEQQGLDP----DQFEYYTKMFKYGMPPHAGWGLGGERLVMTMLGL 416

Query: 554 KNVREVSLFPMSQNFCDL 571
            N+RE  LFP  +     
Sbjct: 417 DNIREAVLFPRDRQRLSP 434


>gi|313902254|ref|ZP_07835660.1| lysyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467484|gb|EFR62992.1| lysyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 552

 Score =  199 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 14/284 (4%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   ++        G  VR++G +  +R HG   F D++D  G  Q++A       +  
Sbjct: 99  THHAREIVDRFAELEGHPVRVAGRLMALRRHGRAAFADLQDASGRIQLLARVGPLAEDTY 158

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +    ++    G  +      I      G+I +      +L  +   PLP         
Sbjct: 159 SA----FLELDRGDWVGAEGTVIRTR--RGEISVEVTGFVLLGKSL-YPLPEKWHGLQNV 211

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDF 180
            +R++ R++DL  +       + R+RII  +R  +    F E  TP+L        AR F
Sbjct: 212 DLRYRQRYVDLIVNPQVLETFRLRSRIIREIRAFLDQRGFYEVETPVLHLIYGGAAARPF 271

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + + + L+  G +R ++I   FR+E   +   P EF  L++ 
Sbjct: 272 VTHHNALDLDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGISTRHNP-EFTMLELY 329

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            +F + + ++   E ++  V +       V      I +    R
Sbjct: 330 QAFSDYEGMMELTEQLVSHVAQAVHGSPVVHYQGQAIDFTPPWR 373



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 18/130 (13%)

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P + ++          +P          L          ++++ +  G EIA+     + 
Sbjct: 434 PTFLYD-----YPVVLSPLARRIPDRPHL---------TYRFEAMVAGMEIANAFSELND 479

Query: 501 SEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
            +   Q F     ++   +            A + G+P  GG+  GIDR+VMLL    ++
Sbjct: 480 PDDQRQRFEEQLAARARGDEEAHQMDEDYIHALEIGLPATGGLGIGIDRLVMLLTDNPSI 539

Query: 557 REVSLFPMSQ 566
           R+V LFP+ +
Sbjct: 540 RDVILFPLMR 549


>gi|84488964|ref|YP_447196.1| aspartyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|97196728|sp|Q2NHT0|SYD_METST RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|84372283|gb|ABC56553.1| AspS [Methanosphaera stadtmanae DSM 3091]
          Length = 439

 Score =  199 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 99/421 (23%), Positives = 176/421 (41%), Gaps = 39/421 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
            RTH   ++G    G  V+++GWVH +R  GGI+F+ IRD  GITQ+ A       E+  
Sbjct: 9   KRTHYSNEIGPELAGETVKVTGWVHEIRDLGGIVFVLIRDKNGITQLTAPSKKLSEEMMA 68

Query: 64  SVR---SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGERE 119
            VR    E ++ + G V   +            +E+    I++++V++  LPL    + E
Sbjct: 69  DVRAARKETIITLTGTVQESAK-------APNGVEIIPSNIDVINVSQLPLPLDTTEKVE 121

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R   RF+DLR+  +      +++++++ R      +F E +TP L AS+ EG  +
Sbjct: 122 AEMDTRLDSRFMDLRKHDVSAIFKIKSQMLHTARNYFYDNDFTEITTPKLVASATEGGTE 181

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               +   + +F  L Q+PQ YKQ++MA+G D  F+I   FR E+  + R   E   +D 
Sbjct: 182 LFPITYFEKEAF--LGQSPQLYKQMMMATGLDNVFEIGQIFRAEEHDTLRHLNEALSIDA 239

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAIRRYG 287
           EMSF  Q D +NT+E +++ +  + S                    F  + Y++ I    
Sbjct: 240 EMSFKSQTDAMNTLEELIKRILSDISTNCQKELSDLDHELDIPTEPFPIVTYEEVIDIVN 299

Query: 288 TDKPDLRNPIIMHNVTE----HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
           +   ++     ++   E      + S + +     ++ P Y +    +     + AF   
Sbjct: 300 SRDVEMNYGEDLNRAAEKVLGETMGSYYFITEWPTAIKPFYVMP--NSDDAEKSTAFDLM 357

Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403
             +   S G   +           ++      AK LN  + E               +  
Sbjct: 358 YRDLELSSGAQRI--------HDYDLLYSQIEAKDLNPDSFEKYLQAFKYGMPPHSGWGM 409

Query: 404 G 404
           G
Sbjct: 410 G 410



 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 12/120 (10%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
              A  PF +     ++         K+  +DL+    E++SG  R H  +++       
Sbjct: 332 WPTAIKPFYVMPNSDDA--------EKSTAFDLMYRDLELSSGAQRIHDYDLLYSQIEAK 383

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            ++     + F    +AF+ GMPPH G   G DR+ M++ GAKN+RE  LFP  +     
Sbjct: 384 DLNP----DSFEKYLQAFKYGMPPHSGWGMGADRLTMVITGAKNIRETVLFPRDRRRLTP 439


>gi|157151486|ref|YP_001450052.1| lysyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|189082972|sp|A8AW92|SYK_STRGC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157076280|gb|ABV10963.1| lysyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 496

 Score =  199 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 61/338 (18%), Positives = 119/338 (35%), Gaps = 26/338 (7%)

Query: 5   RTHSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L                    ++G +   R  G + F  I+D  G  Q+    
Sbjct: 37  RTANSGQLKEKYADKSKEELHDLADTATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DEVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +
Sbjct: 150 KFHGLTDVETIYRKRYLDLISNRESFNRFVTRSKIISEIRRYLDGQGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP-- 291
           F  +++  ++ +  DI++  E +++           ++     I  ++  +R        
Sbjct: 269 FTSIEVYQAYADFQDIMDLTEGIIQHAAISVCGDGPINYQGTEIKINEPFKRVHMVDAIK 328

Query: 292 -----DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
                D    +     T         +      V    
Sbjct: 329 EITGVDFWQDMSFEEATALAKEKNVPLEKHFTEVGHVI 366



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 7/154 (4%)

Query: 418 NHIAQELGIINCNCF-EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             +A+E  +     F E   +++  F E+ EE   +      +  P       K N    
Sbjct: 345 TALAKEKNVPLEKHFTEVGHVINAFFEEFVEET--LTQPTFIYGHPVAVSPLAKKNPEDP 402

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCG 532
               +++L     E A+     +     L  F     +KE+ ++   G       A + G
Sbjct: 403 RFTDRFELFIMTKEYANAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYVEALEYG 462

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP GG+  GIDR+VMLL     +R+V LFP  +
Sbjct: 463 MPPTGGLGIGIDRLVMLLTDVTTIRDVLLFPTMK 496


>gi|269469084|gb|EEZ80637.1| lysyl-tRNA synthetase, class II [uncultured SUP05 cluster
           bacterium]
          Length = 496

 Score =  199 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 65/287 (22%), Positives = 121/287 (42%), Gaps = 21/287 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   +V   V ++G +   R  G   F  ++D     Q+ A  D            +W 
Sbjct: 51  ELEEKNV--EVSVAGRMMLKRVMGKASFATLQDSSAKIQIFATRDELPEGFYNEQFKKWD 108

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           +   G ++         N+  G++ +   +I++L+ +   PLP        + IR++ R+
Sbjct: 109 I---GDIIGAVGTLFKTNV--GELSIRISQIKLLTKSLR-PLPEKFHGLADQEIRYRQRY 162

Query: 131 LDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQ 188
           +DL      +N+  +R++I+  +R      +FIE  TP+L T      A+ F        
Sbjct: 163 VDLIVSEDSRNVFKRRSQIVAYIRNFFNESDFIEVETPMLQTIPGGATAKPFETHHNALD 222

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  AP+ Y + L+  G D+ F+I   FR+E   +   P EF  ++   ++    D
Sbjct: 223 IGMY-LRIAPELYLKRLIVGGMDKVFEINRNFRNEGLSTRHNP-EFTMIEFYQAYATYHD 280

Query: 249 ILNTMENVLRGVFEEFSNG---------NTVSNNFLRICYDDAIRRY 286
           +++  E + RG+  +                S +F RI   D+I +Y
Sbjct: 281 LMDLTEQLFRGIAVDVCGNSSIHYQGDDFDFSKSFDRISVFDSILKY 327



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 6/150 (4%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++LGI   + +          +E   EEK I         P       + ND       
Sbjct: 345 AEKLGIQVKDNWGLGK-TQIEIFEATVEEKLIQPT-FITEYPTEVSPLARRNDNNPFITD 402

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPH 536
           +++L   G EIA+G    + +E     F      K+  ++          RA + GMPP 
Sbjct: 403 RFELFIGGREIANGFSELNDAEDQATRFKAQVAEKDAGDDEAMHYDADYIRALEYGMPPT 462

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G   GIDR+VML   + ++R+V LFP  +
Sbjct: 463 AGEGIGIDRLVMLFTDSPSIRDVLLFPHMR 492


>gi|88808214|ref|ZP_01123725.1| lysyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88788253|gb|EAR19409.1| lysyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 497

 Score =  199 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 60/342 (17%), Positives = 129/342 (37%), Gaps = 28/342 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R +T         +    V ++G V   R  G + F  + D  G  Q+     +    
Sbjct: 41  MARLQTDHADLPKGEEKDCAVAVAGRVMTRRVMGKLAFFTLADETGTIQLFLEKAALGEA 100

Query: 61  IAK---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            A+    V +  ++ + G +              G++ +   +  +L+ + + PLP    
Sbjct: 101 FAQITSLVDAGDLIGVRGTLRRTDR---------GELSVKVAEWTMLTKSLQ-PLPDKWH 150

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRI-INSMRCRMIAENFIECSTPILTASSPEG 176
                  R++ R+LDL      +   +R  + ++++R  +    F+E  TP+L A +   
Sbjct: 151 GLADVEKRYRQRYLDLIVTPQSRETFRRRALTVSAIRRWLDEREFLEIETPVLQAEAGGA 210

Query: 177 -ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+          Y L  A + + + L+  GF+R +++   FR+E   +   P EF 
Sbjct: 211 DARPFITHHNTLDLPLY-LRIATELHLKRLVVGGFERVYELGRIFRNEGMSTRHNP-EFT 268

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            +++  ++ +   +++  E+++  + ++      ++     I      RR          
Sbjct: 269 SVEVYQAYTDYLGMIDLTESMIASICQQVCGSTRLAYQGTEIDLTPPWRR---------- 318

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
              MH + E     +F  FS   +         +P      +
Sbjct: 319 -ATMHELVEEATGLDFTTFSDREAAAEAMAAKGLPVPEKADS 359



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +  N  +  +++D+P     EE   +   H                        +++L  
Sbjct: 372 VEANLTQPTFVLDYP-----EEISPLARKHR----------------SKPGLVERFELFI 410

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAG 542
            G E A+                     +   +    G      +A + GMPP GG+  G
Sbjct: 411 VGRETANAFSELIDPVDQRGRLEAQQARRAAGDEEAQGVDEDFLQALEVGMPPTGGLGIG 470

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR+VMLL  + ++R+V  FP
Sbjct: 471 IDRLVMLLTDSPSIRDVIAFP 491


>gi|118581419|ref|YP_902669.1| lysyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118504129|gb|ABL00612.1| lysyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 503

 Score =  199 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 66/279 (23%), Positives = 114/279 (40%), Gaps = 11/279 (3%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +   R  G   F+ I+D  G  Q+    D    +      +  +  I G+     
Sbjct: 67  VVAGRILARRSFGKAAFIKIQDRKGRLQLYIKKDEIGEQAFADFETFDIGDIVGV----- 121

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK- 140
            E       T ++ L A+KI +L  +   PLP           R++ R++DL  +   + 
Sbjct: 122 -EGFPFRTKTNELSLHAKKIRLLVKSL-HPLPEKFHGLTDVETRYRQRYVDLIVNPESRE 179

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             +KR+RIIN +R  M A +F+E  TP++        A+ F+          + L  AP+
Sbjct: 180 IFIKRSRIINLIRAFMTARDFLEVETPMMQRIPGGATAKPFITHHNALDMQLF-LRIAPE 238

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G +R F+I   FR+E   S R   EF  ++   ++   +D++N  E +   
Sbjct: 239 LYLKRLVVGGMERVFEINRNFRNEGI-SVRHNPEFTMMEFYQAYATYEDLMNFTEELFCH 297

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           V +E        N    I +    +R       L    I
Sbjct: 298 VAQEVLGTLDFVNQGREISFQRPWKRLTVRDAILEYGDI 336



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 7/130 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           +E   E K I       T     +  L + ND       +++L+  G EIA+     +  
Sbjct: 372 FEEVAEHKLIQPTF--VTAYPTEVSPLSRKNDHNPDIVDRFELIVGGREIANAFSELNDP 429

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F +    K   +           RA + G+PP  G   GIDR+VMLL  + ++R
Sbjct: 430 VDQKERFLSQVAEKAKGDEEAHYMDEDYIRALEYGLPPTAGEGIGIDRLVMLLTDSASIR 489

Query: 558 EVSLFPMSQN 567
           +V LFP  + 
Sbjct: 490 DVILFPQLRK 499


>gi|167757477|ref|ZP_02429604.1| hypothetical protein CLORAM_03027 [Clostridium ramosum DSM 1402]
 gi|237735040|ref|ZP_04565521.1| lysyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|167702474|gb|EDS17053.1| hypothetical protein CLORAM_03027 [Clostridium ramosum DSM 1402]
 gi|229381816|gb|EEO31907.1| lysyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 494

 Score =  199 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 68/322 (21%), Positives = 128/322 (39%), Gaps = 26/322 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           +TH   +L    V   V+++G +   R  G + F+ I+D  G  Q+    D+   ++ + 
Sbjct: 48  KTH--EELEEMAV--EVKVAGRIMTKRRKGKVCFMHIQDRDGQIQLYVRKDAVGEDVYEI 103

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           ++   +    G ++         N  TG+  +  ++   L+ A   PLP           
Sbjct: 104 IKKGDI----GDIVGVKGTVFMTN--TGECSIKVEEYTHLTKALR-PLPEKYHGLSDVEE 156

Query: 125 RFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLV 182
           R++ R++DL  +   +     R +II S++  +  + ++E  TP+L        AR F+ 
Sbjct: 157 RYRRRYVDLIMNEEARKIAFARPKIIRSIQHYLDNQGYVEVETPVLNPILGGASARPFVT 216

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  +FY L  A +   + L+  G D  ++I   FR+E       P EF  +++  +
Sbjct: 217 HHNALDMNFY-LRIATELGLKRLIVGGMDAVYEIGRLFRNEGMDRTHNP-EFTTIEVYKA 274

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKPD 292
           F + + +++  E ++     E      +            F RI   DAI+   G D  D
Sbjct: 275 FSDLEGMMDLTEGIISNAANEVCGTYELEYKGNKISLAPGFKRISMTDAIKEKTGIDFAD 334

Query: 293 -LRNPIIMHNVTEHFVHSEFRV 313
            L          EH +  E   
Sbjct: 335 QLSFDDAKKLAEEHHIEVEPHF 356



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 11/133 (8%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   EE  I+      +P  +     ++L           +++L   G E A+     
Sbjct: 365 FFEKYVEETIIEPTFVYGHPIEISPLAKKNLDDP----RFTQRFELFICGNEYANAFTEL 420

Query: 499 HMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      + F+N    KE               A + G+PP GG+  GIDR+VMLL G +
Sbjct: 421 NDPIDQYERFANQLKEKELGNDEANEMDLDYVEALEYGLPPTGGMGMGIDRLVMLLTGQE 480

Query: 555 NVREVSLFPMSQN 567
           ++REV LFP  +N
Sbjct: 481 SIREVILFPHMKN 493


>gi|150020425|ref|YP_001305779.1| asparaginyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149792946|gb|ABR30394.1| asparaginyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 431

 Score =  199 bits (505), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 79/327 (24%), Positives = 124/327 (37%), Gaps = 32/327 (9%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK---S 64
              DL  + VG  V L GWV R R  G I F+++RD  GI QVV    S   E  K    
Sbjct: 4   YIRDL-KNYVGKEVELRGWVWRSRSSGKIAFINMRDGTGIVQVVVEASSVDEETFKNTRK 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R E  L + G+V              G +E+ A  +  + +  E         ++    
Sbjct: 63  LRMESSLIVKGIVKEEQR-------APGGVEIHATHVTPVQIPSEDFPINKP--DHSIEY 113

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              +R L LR       +  R  ++ ++R       FI+  TPI T +  E A +     
Sbjct: 114 LMDHRHLWLRSRRQMHILNIRDTVLKAIRKFYWENGFIQVDTPIFTGAIGESAGNLFKID 173

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             + G  Y L Q  Q Y +        + F + P FR E  ++ R   EF+  + E+++ 
Sbjct: 174 YFDYGKVY-LAQTGQLYLEAA-CMALGKVFNLGPTFRAEKSKTRRHLIEFWMNEAEVAYY 231

Query: 245 EQDDILNTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTD 289
           E +D L   EN++  + +               + S    +   F RI Y +A++     
Sbjct: 232 EHEDNLKLQENLVSYIIKYILENASEHLHALNRDTSKLEKIEPPFPRITYTEAVKLLQKK 291

Query: 290 KPDLRNPIIM--HNVTEHFVHSEFRVF 314
             D+           TE     E  VF
Sbjct: 292 GYDIEWGDDFGGDEETEIAKQFEKPVF 318



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 49/143 (34%), Gaps = 7/143 (4%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           ++    ++  W  DF   E  E  K+ +        P+         D  +      D +
Sbjct: 287 LLQKKGYDIEWGDDFGGDEETEIAKQFEKPVFVTHYPRKAKAFYMQPDPENPDVVLCDDL 346

Query: 486 C---NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
                  EI     R H  +++++      +        +       + G  PH G   G
Sbjct: 347 IAPEGYGEIIGASQRIHDYDLLVERLKEFNLPV----EAYDWYLDLRKFGSVPHSGFGLG 402

Query: 543 IDRIVMLLLGAKNVREVSLFPMS 565
           I+R +  + G +++RE   FP +
Sbjct: 403 IERTIAWIAGLEHIREAIPFPRT 425


>gi|315222516|ref|ZP_07864405.1| lysyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188202|gb|EFU21928.1| lysyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 505

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 64/326 (19%), Positives = 129/326 (39%), Gaps = 26/326 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   +  +L   ++     ++G +   R  G + F  I+D  G  Q+    D+   E 
Sbjct: 56  EKYNDKTKEELH--ELAETATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDTVGEEN 113

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP        
Sbjct: 114 YQIFKKADI----GDFLGIEGEVMRTDM--GELSIKATHITHLSKALR-PLPEKFHGLTD 166

Query: 122 ESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               ++ R+LDL  +       V R+RI++ +R  +  + F+E  TP+L   +   A   
Sbjct: 167 VETIYRKRYLDLISNRESFERFVTRSRIVSEIRRYLDNQGFLEVETPVLHNEAGGAAARP 226

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +     Q     L  A + + + L+  G +R +++   FR+E   +   P EF  ++  
Sbjct: 227 FITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEMGRIFRNEGMDATHNP-EFTTIEAY 285

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKP 291
            ++ + +DI++  E +++   +  ++  +V            F R    +AI+       
Sbjct: 286 QAYADFEDIMDLTEGIIQSAAKAVTDAESVPYQGTEIFIGRKFARKHMLEAIKE--QTGI 343

Query: 292 DLRNPIIMHNVT----EHFVHSEFRV 313
           D    + +   T    EH V  E   
Sbjct: 344 DFWKDMTLEEATALAKEHHVTVEKHF 369



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 6/153 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +     F    I++  F+E +  E  +      +  P       K N     
Sbjct: 355 TALAKEHHVTVEKHFTVGHIINA-FFE-DFVEDTLIQPTFIYGHPVEVSPLAKKNADDPR 412

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGM 533
              +++L   G E A+     +     L  F     +KE+ ++   G       A + GM
Sbjct: 413 FTDRFELFIVGREFANAFTELNDPIDQLARFEAQAKAKELGDDEATGIDYDYVEALEYGM 472

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG+  GIDR++MLL    ++R+V LFP  +
Sbjct: 473 PPTGGLGIGIDRLIMLLTDVTSIRDVLLFPTMK 505


>gi|289548164|ref|YP_003473152.1| lysyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289181781|gb|ADC89025.1| lysyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 569

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 63/331 (19%), Positives = 128/331 (38%), Gaps = 20/331 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              V ++G +  +R  G  +F  ++D  G  Q+    D    E  K           G V
Sbjct: 129 NREVSVAGRLISLRFMGKAVFGHLQDATGKIQIYIRKDLLGEEAFKEFEDT---VDPGDV 185

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RD 136
           +    +    +  TG++ +  Q+  +L+ +   PLP          +R++ R+LDL    
Sbjct: 186 IGVKGKLFRTS--TGELTVEVQEYTLLAKSL-HPLPEKWHGLKDVEVRYRQRYLDLIANP 242

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
              + ++ R+R+I  +R  + ++ F+E  TPIL   +S   A+ F+      + + Y L 
Sbjct: 243 KTREILLLRSRVITEVRRFLESKGFVEVETPILQPVASGANAKPFVTYHNYLEQNLY-LR 301

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G  + +++   FR+E   +   P EF  ++   ++ +  D++   E 
Sbjct: 302 IAPELYLKRLIVGGLLKVYELGKNFRNEGVDTTHNP-EFTMVEFYCAYWDYKDLMAFTEE 360

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           +   +  E   G T++     + +    R Y               + E     +     
Sbjct: 361 LFTHILTEVMGGLTITYQGRLLDFTPPYRVYRY----------FDLLKEKTGKDKDFFLR 410

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
               V        IP      +    D++ +
Sbjct: 411 DEEGVRKLALDIGIPNAEKLTHAKLIDKIFD 441



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 68/220 (30%), Gaps = 36/220 (16%)

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I   +     +   G +               L  + G    F   D       A D   
Sbjct: 365 ILTEVMGGLTITYQGRLLDFTPPYRVYRYFDLLKEKTGKDKDFFLRDEEGVRKLALDIGI 424

Query: 419 HIAQEL-----------GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
             A++L            ++    +  C+++DFP               +P         
Sbjct: 425 PNAEKLTHAKLIDKIFDRLVEEELWGPCFVIDFP------------ALLSPLAKRHREDP 472

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM----LQAFSNVGISKEVVENRFG 523
            L           +++L   G E+A+     +         LQ      +  E       
Sbjct: 473 DL---------VERFELFVAGSELANAYSELNDPIEQRERFLQQLREKEMGDEEAMELDE 523

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              +A + GMPP  G   GIDR+VM+L    ++REV LFP
Sbjct: 524 DFVKALEYGMPPTAGEGIGIDRLVMILADVDSIREVILFP 563


>gi|212704562|ref|ZP_03312690.1| hypothetical protein DESPIG_02622 [Desulfovibrio piger ATCC 29098]
 gi|212671961|gb|EEB32444.1| hypothetical protein DESPIG_02622 [Desulfovibrio piger ATCC 29098]
          Length = 528

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 59/302 (19%), Positives = 124/302 (41%), Gaps = 24/302 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G L   ++   G    ++G +  +R  G + F  I D  G  Q  A+ +    E+   V+
Sbjct: 78  GSLSAEELEAKGDVFAIAGRIVSLRSFGKVAFFHIMDESGRIQCYASREELPEEVYNVVK 137

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V  I G+           +  TG++ +S + +++++ +   PLP           R+
Sbjct: 138 KLDVGDIVGV------SGHLFHTKTGELTISCRNLKLITRS-MRPLPEKYHGLKDMETRY 190

Query: 127 KYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL   +   +   KR+ I++  R  +    F+E  TP++ A +    AR F    
Sbjct: 191 RQRYVDLIVTERAREIFRKRSMIVSEFRRFLEERGFMEVETPMMQAVAGGAAARPFETYH 250

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  AP+ Y + L+  GF++ F++   FR+E   +   P EF   +   ++ 
Sbjct: 251 NALDLKLY-MRIAPELYLKRLLVGGFEKVFELNRNFRNEGIDTRHNP-EFTSCEFYWAYA 308

Query: 245 EQDDILNTMENVLRGVFEEFSN----------GNTVSNNFLRICYDDAIRRYGTDKPDLR 294
              D+++  E +   +  +              +     + R+ + +++ + G   P+  
Sbjct: 309 NFHDLMDLTEELFARLANKVCGGTVITYQGQEIDLTPGKWTRMSFYESLTKIGGHSPEFY 368

Query: 295 NP 296
           N 
Sbjct: 369 ND 370



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            ++ + EEK I   H  +  P       + N+       +++L   G E+A+     +  
Sbjct: 398 LFDLDVEEKLIQP-HFIYHYPTEISPLSRRNNEHPDLTDRFELFITGRELANAFSELNDP 456

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F      KE  ++          RA + GMPP  G   GIDR+VMLL  + ++R
Sbjct: 457 VDQRLRFEEQVREKEAGDDEAHAMDEDFLRALEYGMPPAAGEGIGIDRLVMLLTDSASIR 516

Query: 558 EVSLFP 563
           EV LFP
Sbjct: 517 EVILFP 522


>gi|229551628|ref|ZP_04440353.1| lysine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|229315032|gb|EEN81005.1| lysine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
          Length = 499

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/358 (21%), Positives = 137/358 (38%), Gaps = 29/358 (8%)

Query: 2   HRY-RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTHS   +             +    V ++G +   R  G + F DIRD  G  Q+
Sbjct: 36  HRFDRTHSAAKVREEFGEDDKETLLEEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 95

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    E     +   +    G ++  S E +     +G++ + A  +  L+ A   
Sbjct: 96  YVRKDVVGDENYMIFKKADL----GDILGISGEVM--KTDSGELTVKANHVTHLAKALR- 148

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           +++ R+LDL  +       VKRT+I++++R  +    F+E  TP+L
Sbjct: 149 PLPDKWHGLTDVEQKYRKRYLDLISNPDSFDRFVKRTKIVSAVREYLDNHGFLEVETPVL 208

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + L+  G +R ++I   FR+E   + 
Sbjct: 209 HNQAGGANARPFITHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTK 267

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF +L+   ++ +  D++   E + R    +  +   ++   + I  D    R   
Sbjct: 268 HNP-EFTELETYAAYWDLSDVMVETEGIFRFAAHKVLDSGKLTYQGMDIDLDAPFARINM 326

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                     + + T      E  V       +     +    K G    AF D+  E
Sbjct: 327 LDA-------IKDKTGVDFWPEMTVDEARKLADDHEVHYEPYWKVGHIISAFFDQFVE 377



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 5/109 (4%)

Query: 460 TMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           T     +  L   +    +   +++L   G E A+     +      Q F      K   
Sbjct: 387 TGHPIEVSPLAKKNPKDTRFVERFELFVGGGEYANAFTELNDPIDQRQRFEAQAAEKTAG 446

Query: 519 ENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                G       A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 447 NEEAQGIDDDYVEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 495


>gi|260220768|emb|CBA28663.1| Lysyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 592

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 64/325 (19%), Positives = 136/325 (41%), Gaps = 27/325 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY-----GITQVVANPDSAC 58
           Y   +  +L    +G+  +++G +   R  G   F  ++D       G  Q+    +   
Sbjct: 134 YNDKTTEELAA--LGATAKVAGRMMLKRVMGKASFCTLQDSSFGPSGGRIQLYVRGEDVG 191

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            ++  + +   +  I       +AE       TG++ + A  I +L+ +   P+P     
Sbjct: 192 VDLYAAFKHWDLGDI------VAAEGTLFKTKTGELSIHATSIRLLTKSLR-PMPDKFHG 244

Query: 119 EYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
              +  +++ R++DL  D    K  V R++ ++++R  M++ NF+E  TP+L        
Sbjct: 245 MADQETKYRQRYVDLMTDVESRKRFVARSKAVSALREFMVSHNFLEVETPMLHPIPGGAN 304

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F           + L  AP+ Y + L+  GFDR F+I   +R+E   S R   EF  
Sbjct: 305 AKPFKTHHNALDQEMF-LRIAPELYLKRLIVGGFDRVFEINRSYRNEGI-SVRHNPEFTM 362

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSN---------GNTVSNNFLRICYDDAIRRYG 287
           ++   ++    D+++  E ++R    + +             +   F R+   +AI++Y 
Sbjct: 363 MEFYAAYWNYQDLMDYTEKLIRDAARKATGGLQLSYAGKPVDLEQPFERLTIVEAIQKYT 422

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFR 312
               ++ +   + N  +    +E +
Sbjct: 423 DAGDNVFDATWLTNAVKKLGLTEAK 447



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           ++E   EEK  +     F M      S   + ND       +++L   G E  +G    +
Sbjct: 462 YFEETVEEKLWNPT---FIMEHPTEISPLARANDDRPEVTERFELYITGREFGNGFSELN 518

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            +E     F     +K+  ++          RA + GMPP GG   GIDR++MLL  + +
Sbjct: 519 DAEDQAARFQAQVAAKDSGDDEAMHFDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSAS 578

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 579 IRDVILFP 586


>gi|218779631|ref|YP_002430949.1| lysyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218761015|gb|ACL03481.1| Lysyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 504

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 65/336 (19%), Positives = 129/336 (38%), Gaps = 22/336 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            ++D G    ++G +  +   G   F+  +D  G  Q     D    +  K  ++  V  
Sbjct: 47  SLTDEGPVFGVAGRLMAINKFGKSAFVRFKDRTGQMQAYIRKDQVDEQAFKVFKALHVGD 106

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             GL      +       TG+  L+A+++ +L  +   PLP    +      R++ R+LD
Sbjct: 107 FVGL------KGTIFKTKTGEWTLAARELTLLCKSLR-PLPEKYNKLKDPEKRYRQRYLD 159

Query: 133 LRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +   +   ++R++I+ +MR      +F+E  TP++        A  F+        +
Sbjct: 160 LIMNEETRETFIRRSKIVRAMRRFFDQRDFLEVETPMMQPIPGGAEACPFVTHHNALDMA 219

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  G +R ++I   FR+E   +   P EF  L+   ++    D++
Sbjct: 220 LY-LRIAPELYLKRLVVGGLERVYEINRNFRNEGVSTRHNP-EFTMLEFYWAYATYHDLM 277

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
              E + + V +E     T       I ++   +R           I M N  +    ++
Sbjct: 278 ELTEEMFQHVAKEVLGSTTFMYQGQEISFEGPWKR-----------ISMFNALQTIGGAD 326

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
             V      +    E   +P            ++ +
Sbjct: 327 KEVLEDRDKLIAFAESKNVPIDKKARTGKIMTKLFD 362



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 6/107 (5%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVM----LQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +++L   G EIA+G    +  +      LQ  ++     E           A + GM
Sbjct: 395 LTERFELFIAGKEIANGFSELNDPDDQRGRFLQQVADKEAGDEEAHWMDEDYVEALEYGM 454

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG--SPST 578
           PP  G   GIDR+ MLL  A ++REV LFP  ++   L  G  +P+ 
Sbjct: 455 PPTAGQGVGIDRLAMLLTDAASIREVILFPHMRHAASLKTGDEAPNK 501


>gi|76801236|ref|YP_326244.1| aspartyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|97196739|sp|Q3IT59|SYD_NATPD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|76557101|emb|CAI48675.1| aspartate--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 433

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 89/346 (25%), Positives = 148/346 (42%), Gaps = 43/346 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++      ++ G  V ++GWVH VR  GGI FL +RD  G  QV    D    E+ ++
Sbjct: 4   RTYTAD----AEPGETVTVAGWVHEVRDLGGIAFLILRDTTGQIQVKFEKDEMDDELVET 59

Query: 65  ---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
              V  E V+ + G V             TG +E++ + +E+LS A+   PL   G+ + 
Sbjct: 60  GLNVARESVITVSGDVEEEP------RAPTG-VEVTPETVEVLSEADTELPLDPTGKVDA 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
             S R   R LDLR +        R  ++ ++R      N  E +T  + A+  EG  + 
Sbjct: 113 ELSTRLDNRTLDLRSEEGQAIFEIRAEVLRAVREAFRDANATEINTSKIVATGTEGGTEL 172

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F    Q+PQ +KQL+  S  +R F+I P FR E+  + R   E   +D E
Sbjct: 173 FPITYFGEEAFMN--QSPQLFKQLVAGSNIERVFEIGPIFRAEEHNTPRHLNEATSIDFE 230

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNT--------------VSNNFLRICYDDAIRR- 285
            +F +  D ++  E V+   +E  +   T                  F R+ Y++AI R 
Sbjct: 231 GAFCDHTDAMDVCEQVVTAAYEAVAENCTDQLEALGITEEFEVPETPFPRLSYEEAIERI 290

Query: 286 -----------YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
                      +G D P      +  +V  H+  +++    K   +
Sbjct: 291 NATGELDEQLVWGDDLPTEGEKALGDDVGGHYFITDWPAEIKPFYI 336



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 53/138 (38%), Gaps = 25/138 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             +I D+P                PF +       L         +  +D++    E+ S
Sbjct: 321 HYFITDWP------------AEIKPFYIMDHEDGEL---------STGFDMMHPRMELVS 359

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           GG R H  E ++  F   G+        F    + F+ GMPPH G   G +R++M +L  
Sbjct: 360 GGQREHRREELIAGFEQQGLEP----EAFEYYTKMFKYGMPPHAGWGLGGERLLMTMLDL 415

Query: 554 KNVREVSLFPMSQNFCDL 571
            N+RE  LFP  +     
Sbjct: 416 DNIREAVLFPRDRQRLSP 433


>gi|258540705|ref|YP_003175204.1| lysyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|257152381|emb|CAR91353.1| Lysyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 498

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/358 (21%), Positives = 137/358 (38%), Gaps = 29/358 (8%)

Query: 2   HRY-RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTHS   +             +    V ++G +   R  G + F DIRD  G  Q+
Sbjct: 35  HRFDRTHSAAKVREEFGEDDKETLLEEKPEVTIAGRMMSKRGKGKVGFADIRDRSGKMQI 94

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    E     +   +    G ++  S E +     +G++ + A  +  L+ A   
Sbjct: 95  YVRKDVVGDENYMIFKKADL----GDILGISGEVM--KTDSGELTVKANHVTHLAKALR- 147

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           +++ R+LDL  +       VKRT+I++++R  +    F+E  TP+L
Sbjct: 148 PLPDKWHGLTDVEQKYRKRYLDLISNPDSFDRFVKRTKIVSAVREYLDNHGFLEVETPVL 207

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + L+  G +R ++I   FR+E   + 
Sbjct: 208 HNQAGGANARPFITHHNALDIDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTK 266

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF +L+   ++ +  D++   E + R    +  +   ++   + I  D    R   
Sbjct: 267 HNP-EFTELETYAAYWDLSDVMVETEGIFRFAAHKVLDSGKLTYQGMDIDLDAPFARINM 325

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                     + + T      E  V       +     +    K G    AF D+  E
Sbjct: 326 LDA-------IKDKTGVDFWPEMTVDEARKLADDHEVHYEPYWKVGHIISAFFDQFVE 376



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 5/109 (4%)

Query: 460 TMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           T     +  L   +    +   +++L   G E A+     +      Q F      K   
Sbjct: 386 TGHPIEVSPLAKKNPKDTRFVERFELFVGGGEYANAFTELNDPIDQRQRFEAQAAEKTAG 445

Query: 519 ENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                G       A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 446 NEEAQGIDDDYVEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 494


>gi|262282664|ref|ZP_06060432.1| lysyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262261955|gb|EEY80653.1| lysyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 496

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 60/317 (18%), Positives = 117/317 (36%), Gaps = 26/317 (8%)

Query: 5   RTHSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L                    ++G +   R  G + F  I+D  G  Q+    
Sbjct: 37  RTANSGQLKEKYADKSKEELHDLADTATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DEVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +
Sbjct: 150 KFHGLTDVETIYRKRYLDLISNRESFNRFVTRSKIISEIRRYLDGQGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP-- 291
           F  +++  ++ +  DI++  E +++           ++     I  ++  +R        
Sbjct: 269 FTSIEVYQAYADFQDIMDLTEGIIQHAAISVCGDGPINYQGTEIKINEPFKRVHMVDAIK 328

Query: 292 -----DLRNPIIMHNVT 303
                D    +     T
Sbjct: 329 EITGVDFWQDMSFEEAT 345



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      +  P       K N        +++L     E A+   
Sbjct: 365 IINAFFEEFVEET--LTQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+VMLL  
Sbjct: 423 ELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTD 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 VTTIRDVLLFPTMK 496


>gi|317120994|ref|YP_004100997.1| lysyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315590974|gb|ADU50270.1| lysyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 552

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 61/284 (21%), Positives = 109/284 (38%), Gaps = 14/284 (4%)

Query: 6   THSCGDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   D+        G  VR++G V  +R HG   F D++D  G  Q++A       +  
Sbjct: 99  THHARDVVEQFGQLEGQVVRVAGRVMGLRRHGRAAFADLQDVSGRLQLLARVGPLPEDEY 158

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++          G      AE        G+I +      +L  +   PLP         
Sbjct: 159 RAFLELDRGDWIG------AEGTVIRTRRGEISVEVTGFVLLGKSL-YPLPEKWHGLRDV 211

Query: 123 SIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDF 180
            +R++ R++DL  +         R+++I  +R  +    F E  TP+L        AR F
Sbjct: 212 DLRYRQRYVDLVVNPQVLETFKIRSKVIREIRAFLDRRGFYEVETPVLHLIYGGAAARPF 271

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + + + L+  G +R ++I   FR+E   +   P EF  L++ 
Sbjct: 272 ITHHNALDLDLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGISTRHNP-EFTMLELY 329

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            +F + + ++   E ++  V +       V      I +    R
Sbjct: 330 QAFSDYEGMMELTEQLVSHVAQAVHGTPVVRYQGQEIDFTPPWR 373



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 18/130 (13%)

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P + ++          +P          L          ++++ +  G EIA+     + 
Sbjct: 434 PTFLYD-----YPVVLSPLARRIPDRPHL---------TYRFEALVAGMEIANAFSELND 479

Query: 501 SEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
            +   Q F     ++   +            A + G+P  GG+  GIDR+VML+  + ++
Sbjct: 480 PDDQRQRFEEQLAARARGDEEAHQMDEDYIHALEIGLPATGGLGIGIDRLVMLMTDSPSI 539

Query: 557 REVSLFPMSQ 566
           R+V LFP+ +
Sbjct: 540 RDVILFPLMR 549


>gi|229544031|ref|ZP_04433090.1| asparaginyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229325170|gb|EEN90846.1| asparaginyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 430

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 75/321 (23%), Positives = 118/321 (36%), Gaps = 34/321 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW---VL 71
             +G  V +  W++  R  G I FL++RD  G  Q V   + A  E+ ++ +S       
Sbjct: 10  QHIGEEVTIGVWLNNKRSSGKIAFLELRDGTGFIQGVVVKNEAGEEVFQTAKSMSQETSF 69

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G V   +             EL    I+I+  A + P+               +R L
Sbjct: 70  YVTGTVREDARSPF-------GYELQVTGIQIIHEAVDYPITPKAHG---TEFLMDHRHL 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR    H  +  R  II +         F +   PILT S+PEG  +       ++ ++
Sbjct: 120 WLRSRRQHAVMKIRNEIIRATYEFFNTHGFTKIDPPILTGSAPEGTTELFHTKYFDEEAY 179

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F E +D L 
Sbjct: 180 --LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYEHEDSLK 236

Query: 252 TMENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAI---RRYGTDKPDL 293
             E  +  +         +  +               F RI YDDAI      G D    
Sbjct: 237 VQEQYVSYIVRSVLENCKLDLHRLGRDTSKLEQVSAPFPRITYDDAIELLHEKGFDDIKW 296

Query: 294 RNPIIMHNVTEHFVHSEFRVF 314
                  + T      +  VF
Sbjct: 297 GEDFGAPHETAIAESFDKPVF 317



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 54/149 (36%), Gaps = 21/149 (14%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM--ESLKGNDLL 475
               ++ G  +       +  D P +           A  PF M       E +   DL+
Sbjct: 294 IKWGEDFGAPHETAIAESF--DKPVF-----ITHYPAAIKPFYMQPDAKRPEVVLCADLI 346

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + + +         EI  G  R +  +++L+   +  +S    E  +       + G  P
Sbjct: 347 APEGYG--------EIIGGSERINDYDLLLKRIKDFNLS----EEAYKWYLDLRKYGSVP 394

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           H G   G++R V  + G ++VRE   FP 
Sbjct: 395 HSGFGLGLERTVAWISGVEHVRETIPFPR 423


>gi|329731349|gb|EGG67715.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 430

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 77/322 (23%), Positives = 123/322 (38%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 9   KDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++S A + P+     + +       +R 
Sbjct: 69  LYVTGTITEDNRSDL-------GYEMQVKSIEVISEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +
Sbjct: 119 LWLRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 179 F--LSQSGQLYLEAA-AMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESL 235

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDAI      G D  +
Sbjct: 236 EIQEQYVTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 296 WGEDFGAPHETAIANHYDLPVF 317



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 56/192 (29%), Gaps = 27/192 (14%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE---- 433
            L +   E    +L+            D ++F            ++ G  +         
Sbjct: 254 KLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHYD 313

Query: 434 -FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              +I ++P                PF M               I    Y       EI 
Sbjct: 314 LPVFITNYP------------TKIKPFYMQPNPENEKTVLCADLIAPEGY------GEII 355

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    E++ Q     G+     E  +       + G  PH G   G++R V  + G
Sbjct: 356 GGSERVDDLELLEQRVKEHGLD----EEAYSYYLDLRRYGSVPHCGFGLGLERTVAWISG 411

Query: 553 AKNVREVSLFPM 564
            ++VRE + FP 
Sbjct: 412 VEHVRETAPFPR 423


>gi|21283073|ref|NP_646161.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MW2]
 gi|24212397|sp|Q8NWP3|SYN_STAAW RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|21204513|dbj|BAB95209.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MW2]
          Length = 430

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 77/322 (23%), Positives = 123/322 (38%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 9   KDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++S A + P+     + +       +R 
Sbjct: 69  LYVTGTITEDNRSDL-------GYEMQVKSIEVISEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +
Sbjct: 119 LWLRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 179 F--LSQSGQLYLEAA-AMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESL 235

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDAI      G D  +
Sbjct: 236 EIQEQYVTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAIEFLKSEGFDDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 296 WGEDFGAPHETAIANHYDLPVF 317



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 31/194 (15%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE---- 433
            L +   E    +L+            D ++F            ++ G  +         
Sbjct: 254 KLELKILERDTSKLEKVATPFPRISYDDAIEFLKSEGFDDIEWGEDFGAPHETAIANHYD 313

Query: 434 -FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFE 490
              +I ++P                PF M       E++   DL++ + +         E
Sbjct: 314 LPVFITNYP------------TKIKPFYMQPNPENEETVLCADLIAPEGYG--------E 353

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R    E++ Q     G+     E  +       + G  PH G   G++R V  +
Sbjct: 354 IIGGSERVDDLELLEQRVKEHGLD----EEAYSYYLDLRRYGSVPHCGFGLGLERTVAWI 409

Query: 551 LGAKNVREVSLFPM 564
            G ++VRE + FP 
Sbjct: 410 SGVEHVRETAPFPR 423


>gi|170076670|ref|YP_001733308.1| lysyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|169884339|gb|ACA98052.1| lysyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 538

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 64/353 (18%), Positives = 135/353 (38%), Gaps = 40/353 (11%)

Query: 1   MHRYR-----THSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI 47
           M+ Y      +H   +L           +V   V ++G +   R  G + F  ++D  G 
Sbjct: 28  MNPYAYKWEISHHTAELQEKYKDIEAGEEVEDTVSIAGRILARRVFGKLAFFSLQDETGT 87

Query: 48  TQVVANP---DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL 104
            Q+  +    +    ++  +      L   G ++             G++ +   +  +L
Sbjct: 88  IQLYLDKKLINGGMPDLEGAFNHLKKLTDVGDIIGVKGIIKRTE--KGELSIKVSQFAML 145

Query: 105 SVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIE 163
           + +  LPLP           R++ R++DL     + +   +R +I  ++R  +   +F+E
Sbjct: 146 TKSL-LPLPDKWHGLTDIEKRYRQRYVDLIINPQVKETFRRRAKITAAIRRYLEDRDFLE 204

Query: 164 CSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
             TP+L A +    AR F+          Y L  A + + + L+  GF+R F++   FR+
Sbjct: 205 IETPVLQAEAGGAEARPFITHHNTLDMPLY-LRIATELHLKRLVVGGFERVFELGRIFRN 263

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           E   +   P EF  +++  ++ +  D+++  E+++R + ++                  A
Sbjct: 264 EGVSTKHNP-EFTSIEVYQAYGDYFDMMDLTEDLIRTLAKDIVG--------------QA 308

Query: 283 IRRYGTDKPDLRNPI---IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
              YG    D+  P     M N+ +      F  F  + +     E   +   
Sbjct: 309 QLPYGEVIVDVGTPWRRETMQNLVQEATGINFLSFDDLNAAKQAAESVGMHIP 361



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 4/93 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++L   G E+A+G           Q        K   +            A +
Sbjct: 406 KPGLTERFELFIVGRELANGFSELTDPVDQRQRLEEQAAKKAAGDEEACDVDEDFVTALE 465

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP  G+  GIDR+VMLL  A+++R+V  FP
Sbjct: 466 YGMPPTVGLGIGIDRLVMLLTNAESIRDVIAFP 498


>gi|156740037|ref|YP_001430166.1| lysyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|189082965|sp|A7NFC6|SYK_ROSCS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|156231365|gb|ABU56148.1| lysyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 489

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 69/315 (21%), Positives = 123/315 (39%), Gaps = 17/315 (5%)

Query: 5   RTHSCGDL-----GVSDVGSFVRLSGW-VHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           RTH+ G++      + D G  V ++G  V   R  G + F  I D  G  Q+  +     
Sbjct: 31  RTHTIGEVLAGFDQLMDRGEQVTVAGRIVGARRVLGKLAFAHIEDESGRIQLWLSRGDLG 90

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E     R +             A         G+  +   ++ +L+ +   P P     
Sbjct: 91  DEWFDRFRDDL-----DTFDIVEASGTLRRTQRGEPSVFVTRMGVLAKSL-NPPPEKWHG 144

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS-SPEG 176
                 R + R+LDL  +   +++ + R  I+ +MR  +    F+E  TP L        
Sbjct: 145 LSDIEERHRQRYLDLIVNPEVRDVFRTRATIVRTMRRFLDERGFLEVETPTLQPIYGGAS 204

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+      +   Y L  A + Y + L+  GF+R ++I+  FR+E       P EF  
Sbjct: 205 ARPFITHHNQLKQDLY-LRIAVELYLKRLIVGGFERVYEISKVFRNEGVDRTHNP-EFTM 262

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP-DLRN 295
           ++   ++ +  D++  +E++ R +  E +   T+      I +  A RR         R 
Sbjct: 263 MECYQAYADYHDMMRLVEDLYRALALEVTGSTTIVFQGQTIDFGPAWRRVSIPAAIAERT 322

Query: 296 PIIMHNVTEHFVHSE 310
            I +  +TE     E
Sbjct: 323 GIDILELTELEPLQE 337



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 4/88 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPP 535
            +++ V  G EI +     +      Q F   G + +  ++           A   GMPP
Sbjct: 396 ERFEPVVAGMEIGNAFTELNDPLDQEQRFLEQGRAYDAGDDEAQQMDVDFLNALMYGMPP 455

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG+  GIDR VML     ++REV LFP
Sbjct: 456 TGGLGIGIDRTVMLFTDQPSIREVILFP 483


>gi|85860098|ref|YP_462300.1| lysyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85723189|gb|ABC78132.1| lysyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 542

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 65/288 (22%), Positives = 120/288 (41%), Gaps = 20/288 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +     L+G +  +R  G   F++I+D  G  Q   + +S         +   V    G 
Sbjct: 99  LNERFTLAGRMMAIRNFGKAAFINIQDRKGRIQAYLHRNSIGDASYALFKRLDV----GD 154

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++      I     TG++ + A +  +LS A   PLP           R++ R +DL  +
Sbjct: 155 IVFIGGRPIRTK--TGELTIEADEFMLLSKAIR-PLPEKWHGLTDVETRYRQRHVDLIVN 211

Query: 137 T-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYAL 194
             + +  + R+RIIN++R  M   +F+E  TP++   +    AR F           Y L
Sbjct: 212 PKVREVFITRSRIINAIRQFMDERDFLEVETPMMQPKAGGATARPFETHHNALGMDLY-L 270

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  G +R ++I   FR+E   +   P EF  ++   ++   +D+++  E
Sbjct: 271 RIAPELYLKRLITGGMERVYEINRNFRNEGISTFHNP-EFTMMEFYQAYATYEDLMDMTE 329

Query: 255 NVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPDL 293
            +   V  +   G               + RI   ++I R+    PD+
Sbjct: 330 ELFASVAMKIFGGLKFQYQGMDIDLTPPWPRISVKESILRHHDIDPDV 377



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 55/160 (34%), Gaps = 27/160 (16%)

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                  I +E  ++     +  ++  +P               +P +   G   SL   
Sbjct: 401 LGKLVTAIFEE--VVEKELVQPTFVTLYP------------VEVSPLSRRNGKDPSLTD- 445

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRA 528
                   +++L   G EIA+     +  +   + F      +E              R 
Sbjct: 446 --------RFELYIAGREIANAFSELNDPQDQRERFLMQAREREEGNEETHVMDEDYVRV 497

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            +  MPP  G   GIDR+VML   + ++R+V LFP  +  
Sbjct: 498 LEYAMPPTAGEGIGIDRLVMLFTDSPSIRDVILFPHMRKR 537


>gi|330507681|ref|YP_004384109.1| aspartyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928489|gb|AEB68291.1| aspartyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 434

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 90/352 (25%), Positives = 153/352 (43%), Gaps = 35/352 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           RTH  G +     G  V L+G+ H +R  GGI FL +RD  G+ Q+           F++
Sbjct: 4   RTHYSGQISADMDGKEVMLAGFAHEIRDLGGIAFLVLRDREGMAQITLVKKLLGKDVFKM 63

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREY 120
           A+S+  E V+ + G V + +             E+   +I++LS A+  LPL    + E 
Sbjct: 64  ARSISRESVVMVRGNVKAEAK-------APRGYEILPTEIQVLSAAQVPLPLDPTEKVEC 116

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   RF+D+RR  +       + ++ S+R     +  +E  TP + A++ EG  D 
Sbjct: 117 ELDTRLDSRFMDIRRPCVLAAFEIESAVLCSLRDYFHKKGIVEVFTPKIVAAATEGGTDL 176

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S   + +F  L Q+PQ YKQ+LM +G DR ++I P FR E+  + R   E   +D+E
Sbjct: 177 FPISYFEKEAF--LNQSPQLYKQMLMGAGMDRVYEIGPIFRAEEHDTRRHLNEAISIDLE 234

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAI----- 283
           +SF +  D++  +E  + G +   ++                   F RI Y  A+     
Sbjct: 235 VSFADDKDVMEILEEAVAGAYSYVADNCRRQLEVLNMELEVPRLPFKRITYTRALELAEE 294

Query: 284 -----RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
                 ++G D        +  ++ EH+   ++    K     P  +   I 
Sbjct: 295 KAGARMQWGDDLDTETERFLGESIGEHYFLIDWPSSIKPYYTLPYEDKPEIC 346



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 29/167 (17%)

Query: 407 LKFCSFAADARNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
           L+     A AR     +L       +  +  E  +++D+P                 +T+
Sbjct: 289 LELAEEKAGARMQWGDDLDTETERFLGESIGEHYFLIDWP-----------SSIKPYYTL 337

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P      +            +DL+    E+ASG  R H   ++++     G+      + 
Sbjct: 338 PYEDKPEI---------CRGFDLMHPRMELASGAQRVHDYSLLVERIKEKGLDP----DG 384

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           F    RAF+ GMPPH G   G+ R+VM +L  +N+R+  +FP  +  
Sbjct: 385 FEFYLRAFRYGMPPHAGWGLGLSRLVMTMLNLENIRDAVIFPRDRRR 431


>gi|222151349|ref|YP_002560505.1| asparaginyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222120474|dbj|BAH17809.1| asparaginyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 431

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 77/323 (23%), Positives = 122/323 (37%), Gaps = 34/323 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEW 69
             + VG  V +  W+   R  G I FL +RD  G  Q V   +S     F++AK +  E 
Sbjct: 9   SPNYVGQTVTIGAWILNKRSSGKIAFLQLRDGTGFMQAVVVKESIGEDLFKVAKGITQES 68

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L I G++                 E+    +EI+  A + P+               +R
Sbjct: 69  SLFITGVIKEDERSDF-------GFEMEVTDLEIIHEAVDYPITPKAHG---TDFLMDHR 118

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR    H  +  R  II +       + F +   PILT S+PEG  +       ++ 
Sbjct: 119 HLWLRSKRQHAVMKIRNEIIRATYEFFNEQGFTKIDPPILTGSAPEGTSELFHTKYFDED 178

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +F  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F   +D 
Sbjct: 179 AF--LSQSGQLYMEAA-AMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYRHEDS 235

Query: 250 LNTMENVLRGVFEEFSNGN---------------TVSNNFLRICYDDAIRRY---GTDKP 291
           L   E  +  + +                      ++  F RI Y DAI+     G D  
Sbjct: 236 LEVQEQYVTHLVKSVLKNCQLDLKILGRDTTKLEQITTPFPRITYTDAIKFLKEQGFDDI 295

Query: 292 DLRNPIIMHNVTEHFVHSEFRVF 314
           +  +     + T    H +  VF
Sbjct: 296 EWGDDFGAPHETAIANHYDKPVF 318



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 52/169 (30%), Gaps = 27/169 (15%)

Query: 401 FIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEEKKIDFA 455
               D +KF             + G  +         +  +I+++P             +
Sbjct: 278 ITYTDAIKFLKEQGFDDIEWGDDFGAPHETAIANHYDKPVFIINYP------------TS 325

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
             PF M     E         I    Y       EI  G  R    E++ Q     G+  
Sbjct: 326 IKPFYMQPNPEEEGTVKCADMIAPEGY------GEIIGGSERIDDLELLQQRIKEHGLDP 379

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +       + G  PH G   G++R V  L G ++VRE S FP 
Sbjct: 380 ----EAYSYYTDLRKYGSVPHSGFGLGLERTVAWLSGVEHVRETSPFPR 424


>gi|319938836|ref|ZP_08013200.1| lysyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319811886|gb|EFW08152.1| lysyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 495

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 64/326 (19%), Positives = 129/326 (39%), Gaps = 26/326 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   +  +L   ++     ++G +   R  G + F  I+D  G  Q+    D+   E 
Sbjct: 46  EKYSDKTKEELH--ELAETATIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDTVGEEN 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP        
Sbjct: 104 YQIFKKADI----GDFLGIEGEIMRTDM--GELSIKATHITHLSKALR-PLPEKFHGLTD 156

Query: 122 ESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               ++ R+LDL  +       V R+RI++ +R  +  + F+E  TP+L   +   A   
Sbjct: 157 VETIYRKRYLDLISNRESFERFVTRSRIVSEIRRYLDNQGFLEVETPVLHNEAGGAAARP 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +     Q     L  A + + + L+  G +R +++   FR+E   +   P EF  ++  
Sbjct: 217 FITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEMGRIFRNEGMDATHNP-EFTTIEAY 275

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKP 291
            ++ + +DI++  E +++   +  ++  +V            F R    +AI+       
Sbjct: 276 QAYADFEDIMDLTEGIIQSAAKAVTDAESVPYQGTEIFIGRKFARKHMLEAIKE--QTGI 333

Query: 292 DLRNPIIMHNVT----EHFVHSEFRV 313
           D    + +   T    EH V  E   
Sbjct: 334 DFWKEMTLEEATALAKEHHVTVEKHF 359



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 6/153 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +     F    I++  F+E +  E  +      +  P       K N     
Sbjct: 345 TALAKEHHVTVEKHFTVGHIINA-FFE-DFVEDTLIQPTFIYGHPVEVSPLAKKNADDPR 402

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGM 533
              +++L   G E A+     +     L  F     +KE+ ++   G       A + GM
Sbjct: 403 FTDRFELFIVGREFANAFTELNDPIDQLSRFEAQAQAKELGDDEATGIDYDYVEALEYGM 462

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG+  GIDR++MLL    ++R+V LFP  +
Sbjct: 463 PPTGGLGIGIDRLIMLLTDVTSIRDVLLFPTMK 495


>gi|57650409|ref|YP_186338.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           COL]
 gi|87161603|ref|YP_494042.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195188|ref|YP_499989.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|151221577|ref|YP_001332399.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|161509622|ref|YP_001575281.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221140979|ref|ZP_03565472.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|258451112|ref|ZP_05699147.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|262048980|ref|ZP_06021859.1| asparaginyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051626|ref|ZP_06023846.1| asparaginyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|282916721|ref|ZP_06324479.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|282921700|ref|ZP_06329417.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|283770527|ref|ZP_06343419.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           H19]
 gi|284024453|ref|ZP_06378851.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           132]
 gi|294848418|ref|ZP_06789164.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|81694480|sp|Q5HFW9|SYN_STAAC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123291797|sp|Q2FYH6|SYN_STAA8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123722388|sp|Q2FGY6|SYN_STAA3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|172048886|sp|A6QH05|SYN_STAAE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|189083484|sp|A8Z434|SYN_STAAT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|57284595|gb|AAW36689.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           COL]
 gi|87127577|gb|ABD22091.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202746|gb|ABD30556.1| asparaginyl-tRNA synthetase,putative [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|150374377|dbj|BAF67637.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|160368431|gb|ABX29402.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257861167|gb|EEV83980.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|259160467|gb|EEW45491.1| asparaginyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259162912|gb|EEW47475.1| asparaginyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|269940947|emb|CBI49331.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282319208|gb|EFB49560.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|282593962|gb|EFB98951.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|283460674|gb|EFC07764.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           H19]
 gi|283470667|emb|CAQ49878.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
 gi|294824444|gb|EFG40867.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|302333065|gb|ADL23258.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|302751285|gb|ADL65462.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|315197800|gb|EFU28134.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|329314131|gb|AEB88544.1| Asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329723218|gb|EGG59749.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 430

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 77/322 (23%), Positives = 123/322 (38%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 9   KDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++S A + P+     + +       +R 
Sbjct: 69  LYVTGTITEDNRSDL-------GYEMQVKSIEVISEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +
Sbjct: 119 LWLRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 179 F--LSQSGQLYLEAA-AMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESL 235

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDAI      G D  +
Sbjct: 236 EIQEQYVTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 296 WGEDFGAPHETAIANHYDLPVF 317



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 31/194 (15%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE---- 433
            L +   E    +L+            D ++F            ++ G  +         
Sbjct: 254 KLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHYD 313

Query: 434 -FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFE 490
              +I ++P                PF M       E++   DL++ + +         E
Sbjct: 314 LPVFITNYP------------TKIKPFYMQPNPENEETVLCADLIAPEGYG--------E 353

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R    E++ Q     G+     E  +       + G  PH G   G++R V  +
Sbjct: 354 IIGGSERVDDLELLEQRVKEHGLD----EEAYSYYLDLRRYGSVPHCGFGLGLERTVAWI 409

Query: 551 LGAKNVREVSLFPM 564
            G ++VRE + FP 
Sbjct: 410 SGVEHVRETAPFPR 423


>gi|193213961|ref|YP_001995160.1| lysyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193087438|gb|ACF12713.1| lysyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 517

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 66/306 (21%), Positives = 127/306 (41%), Gaps = 29/306 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +  +R  G   F  ++D  G  QV    D    E+ ++    + L   G ++  
Sbjct: 73  VAIAGRIMSIRKMGKASFFHVQDASGRIQVYIKKD----EVGETAYQVFKLLDIGDIVGV 128

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----------YPESIRFKYRF 130
                +    TG++ + A+  E+LS +         +              + +R++ R+
Sbjct: 129 KG--FSFRTKTGEVSVHAEACELLSKSLRPMPIAKQKEVDGKTVTYDAFSDKELRYRQRY 186

Query: 131 LDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQ 188
           +DL  +   K +  KRT++INS+R  +    ++E  TPIL        AR F+       
Sbjct: 187 VDLIVNPEVKTVFLKRTKMINSIRNFLNERGYLEVETPILQPIYGGASARPFVTHHNTLD 246

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  A + Y + L+  GFD  ++ A  FR+E       P EF Q+++ +++ +   
Sbjct: 247 MPLY-LRIANELYLKRLIVGGFDGVYEFAKDFRNEGMDRFHNP-EFTQIELYVAYKDYAW 304

Query: 249 ILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           ++N +E +L    E  +    V            F R+   D+I+ Y     D ++   +
Sbjct: 305 MMNLVEEMLSKTAEAVNGSTVVEFAGHKIDLKPPFKRMTITDSIKEYTGKDIDGKSEAEL 364

Query: 300 HNVTEH 305
             + + 
Sbjct: 365 RQIAKE 370



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 11/159 (6%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           A+ R  IA+ELGI          I+D  F E+  E K ID     F M      S     
Sbjct: 362 AELRQ-IAKELGIEIEANLGSSKIIDEIFGEYV-EPKLIDPT---FIMDYPVEMSPLAKK 416

Query: 474 LLSIKAF--QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYR 527
                 F  +++L+  G EI +     +               +   ++          R
Sbjct: 417 HREKPGFVERFELIAAGKEICNSFSELNDPLDQRARLEEQASLRARGDDEAMAVDEDFLR 476

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + GMPP  G+  GIDR+ M+L G +++R+V  FP  +
Sbjct: 477 ALEYGMPPCAGLGIGIDRLAMILTGQESIRDVLFFPQMK 515


>gi|297566644|ref|YP_003685616.1| lysyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296851093|gb|ADH64108.1| lysyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 503

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 131/364 (35%), Gaps = 41/364 (11%)

Query: 2   HRY-RTHSCGDLGVSDV---------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           +RY +THS   +  +           G  VR++G +   R  G   F  ++D  G  Q+ 
Sbjct: 28  YRYDKTHSAAQILAAHPEPQPGQEFPGEKVRMAGRLMTFRHMGKASFAHLQDESGRIQIY 87

Query: 52  ANPD-SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
              D +  +++ K +    ++ ++G V             TG++ +  ++   L  +   
Sbjct: 88  LARDLTERYDLLKKLDIGDIVGVEGTVFVT---------KTGEVTIKVERWLPLVKSL-H 137

Query: 111 PLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           R++ R+LDL     + +    R+R+   +R  +    F+E   P L
Sbjct: 138 PLPDKWHGIKDLETRYRQRYLDLIQNPEVREVFRIRSRVTRYIRDYLTDRGFLEVEGPTL 197

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F          FY L  A + + + L+  GF++ F+I   +R+E     
Sbjct: 198 QVVAGGTEARPFKTYHNALNHEFY-LRIALELHLKRLLVGGFEKVFEIGRNYRNEGISHK 256

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  L+   ++ +  D++  +E++L G+                        RYG 
Sbjct: 257 HNP-EFTMLEAYWAYADYTDMMALVEDMLSGMVASIHGTTK--------------IRYGE 301

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFS-KILSVNPGYEVWAIPAKGGGGNRAFCDRMN-E 346
            + D   P    +            F    L     +     P      +    D++  E
Sbjct: 302 HEIDFATPFRRIDFVGTLKEKAGLDFDPTDLERLRQFADSKHPEMRSVPSYKLLDKLFGE 361

Query: 347 WARS 350
           +   
Sbjct: 362 YVEP 365



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 5/96 (5%)

Query: 473 DLLSI-KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYR 527
           D        + DL   GFEI+      + +    + F      ++        +      
Sbjct: 389 DPAKANLTERADLYVAGFEISPIYSELNDALDQRKRFEEQSARRQAGDEEEPEQDEDFLL 448

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G+  GIDR+ MLL    ++R+V LFP
Sbjct: 449 ALEYGMPPAAGMGLGIDRLTMLLTDQHSIRDVILFP 484


>gi|297207886|ref|ZP_06924319.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300911971|ref|ZP_07129414.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|296887460|gb|EFH26360.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300886217|gb|EFK81419.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 432

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 77/322 (23%), Positives = 123/322 (38%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 11  KDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++S A + P+     + +       +R 
Sbjct: 71  LYVTGTITEDNRSDL-------GYEMQVKSIEVISEAHDYPITP---KNHGTEFLMDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +
Sbjct: 121 LWLRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 181 F--LSQSGQLYLEAA-AMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESL 237

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDAI      G D  +
Sbjct: 238 EIQEQYVTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAIEFLKSEGFDDIE 297

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 298 WGEDFGAPHETAIANHYDLPVF 319



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 31/194 (15%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE---- 433
            L +   E    +L+            D ++F            ++ G  +         
Sbjct: 256 KLELKILERDTSKLEKVATPFPRISYDDAIEFLKSEGFDDIEWGEDFGAPHETAIANHYD 315

Query: 434 -FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFE 490
              +I ++P                PF M       E++   DL++ + +         E
Sbjct: 316 LPVFITNYP------------TKIKPFYMQPNPENEETVLCADLIAPEGYG--------E 355

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R    E++ Q     G+     E  +       + G  PH G   G++R V  +
Sbjct: 356 IIGGSERVDDLELLEQRVKEHGLD----EEAYSYYLDLRRYGSVPHCGFGLGLERTVAWI 411

Query: 551 LGAKNVREVSLFPM 564
            G ++VRE + FP 
Sbjct: 412 SGVEHVRETAPFPR 425


>gi|320527101|ref|ZP_08028290.1| lysyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132686|gb|EFW25227.1| lysyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 544

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 66/319 (20%), Positives = 121/319 (37%), Gaps = 20/319 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y   S  +L        V ++G + + R  G + F+ + D  G  QVV N      EI +
Sbjct: 92  YSEKSAEELESLHA--EVSIAGRIMQKRRMGKLGFIHLLDREGKIQVVINKRIIGDEIYE 149

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             ++  +  I G+              TG++ + A +   LS A   PLP        + 
Sbjct: 150 LFKASDLGDIVGI------RGTVIKTQTGELSVEAHEYTHLSKALR-PLPDKFHGLQDKE 202

Query: 124 IRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFL 181
            R++ R++DL  +    K  + R RI++++R  M ++ ++E  TPIL        AR F+
Sbjct: 203 ERYRRRYVDLIMNDESRKIAILRPRIVSAIRRYMDSQGYLEVETPILQPILGGANARPFI 262

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                    FY L  A +   + L+  G ++ ++I   FR+E       P EF  ++   
Sbjct: 263 THHNALDKDFY-LRIATELPLKRLIVGGLEKVYEIGRIFRNEGMDLKHNP-EFTTMEAYC 320

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP-------DLR 294
           ++ + + ++   E +   V  E             I      +R+            D  
Sbjct: 321 AYTDLEGMMKLNEGLFEHVALEVCGTTDFKFMGQDISLKAPFKRWNMVDAVKEVTGVDFW 380

Query: 295 NPIIMHNVTEHFVHSEFRV 313
            P+ +    +        V
Sbjct: 381 QPMSVEEAYKLAQEHHITV 399



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 4/124 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E KI      +  P       K N        +++L+ NG E+ +     +      + F
Sbjct: 419 EDKIVQPTFVYGHPIEISPLAKKNPEDPRFTDRFELLVNGIEMDNAFTELNDPIDQRERF 478

Query: 509 SNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +KE+ ++           A + G+PP GGI  GIDR VMLL G  ++R+V LFP 
Sbjct: 479 EAQLKAKELGDDEANEMDTDYVEALEYGLPPTGGIGFGIDRFVMLLTGTDSIRDVLLFPT 538

Query: 565 SQNF 568
            ++ 
Sbjct: 539 MKDR 542


>gi|56963824|ref|YP_175555.1| asparaginyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|59798484|sp|Q5WGB1|SYN_BACSK RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|56910067|dbj|BAD64594.1| asparaginyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 430

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 81/319 (25%), Positives = 126/319 (39%), Gaps = 34/319 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           V   V +  W+   R  G I FL +RD  G  Q   V A      F +AKS+  E  L +
Sbjct: 12  VNEQVTIGAWIANKRSSGKIAFLQLRDGTGFIQGVVVKAEVPEDVFALAKSITQESSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V                 ELS ++IE++  A + P+     +++       +R L L
Sbjct: 72  TGTVREDERS-------PSGYELSVEQIELIHQATDYPITP---KQHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R++II S         F +  +PILT SSPEG  +       ++ ++  
Sbjct: 122 RSKRQHAIMKIRSQIIRSTYDFFSERGFTKLDSPILTGSSPEGTSELFHTKYFDEDAY-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y     A    R F   P FR E  ++ R   EF+ ++ EM+FVE ++ L   
Sbjct: 180 LSQSGQLY-AEAGAMALGRVFTFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEHEESLEIQ 238

Query: 254 ENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRY---GTDKPDLRN 295
           E  +  + +   +   +                  F RI YD+A+      G D     +
Sbjct: 239 EQYVAHLAKAVLDHCQLELKQLGRDVTKLEAIKAPFPRITYDEALDLLKEKGFDDISWGD 298

Query: 296 PIIMHNVTEHFVHSEFRVF 314
                + T    H +  VF
Sbjct: 299 DFGSPHETAIAEHFDKPVF 317



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 24/155 (15%)

Query: 422 QELGIINCNCFE-FCWIMDF--PF-------YEWNEEEKKIDFAHNPFTMPQGGMES--L 469
           + L ++    F+   W  DF  P        ++      +   +  PF M         +
Sbjct: 281 EALDLLKEKGFDDISWGDDFGSPHETAIAEHFDKPVFITRYPRSLKPFYMQPAPDRDDVV 340

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              DL++ + +         EI  G  R H  +++ Q      +      + +G      
Sbjct: 341 LCADLIAPEGYG--------EIIGGSERIHDYDLLKQELEKHNLPL----DAYGWYLDLR 388

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + G  PH G   G++R V  L G ++VRE   FP 
Sbjct: 389 KYGSVPHSGFGLGLERTVAWLSGTEHVRETIPFPR 423


>gi|56750719|ref|YP_171420.1| asparaginyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|56685678|dbj|BAD78900.1| asparaginyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
          Length = 462

 Score =  198 bits (504), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 85/417 (20%), Positives = 151/417 (36%), Gaps = 58/417 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSE 68
           L     G  V + GW+   R      F+++ D   +   QVV   + A +E +AK + + 
Sbjct: 10  LSQGQPGQTVVVRGWIRTARQLKEFTFVEVNDGSCLKGIQVVLGQELADYEMLAKQLDTG 69

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + ++G +++  A+         ++EL A  +EI+  A+    P+  +R   E +R   
Sbjct: 70  AAIAVEGQLVASPAKG-------QRVELQAASVEIVGGADPEQYPLQKKRHSFEFLR-TI 121

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R ++L   +  R     ++        F+   TPI+TAS  EGA +    + ++ 
Sbjct: 122 AHLRPRTNSLGAVMRVRNAAATAIHDFFQERGFLWVHTPIITASDCEGAGELFTVTNLDL 181

Query: 189 G-------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                          F+   A      Q +  +M  GF   +   P FR E+  + R   
Sbjct: 182 DKLGQSQQAPDFEQDFFGKRAYLTVSGQLEAEIMGLGFSNVYTFGPTFRAENSNTSRHLA 241

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS--------------------- 271
           EF+ ++ E +F +    ++  E  L+ VF+  S+  +                       
Sbjct: 242 EFWMVEPETAFCDLGGDMDLAEAFLKFVFQRVSDRCSEDLEFFNQRIDSEVLNRAETILN 301

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
           N+F R+ Y DAI            P+   +   +EH  +     F K L V         
Sbjct: 302 NDFERVSYTDAIALLEKADRSFDYPVAWGIDLQSEHERYLAEEYFRKPLIVYDYPREI-- 359

Query: 330 PAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386
                   R   D+    A     PG+  I   +  S     +G + + L   N   
Sbjct: 360 ---KALYMRLNDDQKTVAAMDVLAPGIGEI---IGGSQREERLGVLKQRLAEANLPE 410



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
             +D  ++ A   D++  G  EI  G  R     V+ Q  +   +     E  +      
Sbjct: 366 LNDDQKTVAAM--DVLAPGIGEIIGGSQREERLGVLKQRLAEANLP----EENYWWYLDL 419

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           ++ G  PH G   G +R+V  + G  N+R+V  FP +  
Sbjct: 420 WRYGSVPHAGFGLGFERLVQFITGMGNIRDVIPFPRTPQ 458


>gi|313889970|ref|ZP_07823607.1| lysine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121628|gb|EFR44730.1| lysine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 496

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 68/354 (19%), Positives = 133/354 (37%), Gaps = 27/354 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             D+     ++G +   R  G + F  I+D  G  Q+    
Sbjct: 37  RTANSGQLKAKYAEKTKEDLHDLNEKAVIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E     +   +    G  +    E +  ++  G++ + A  +  LS +   PLP 
Sbjct: 97  DAVGDENYDIFKKADL----GDFLGVEGEIMRTDM--GELSIKATHLTHLSKSLR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R LDL  +       V R+RII+ +R  + +++F+E  TP+L   +
Sbjct: 150 KFHGLTDIETIYRKRHLDLISNRESFNRFVTRSRIISEIRRYLDSKDFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI+N  E +++   +  +    +      I  ++  +R        
Sbjct: 269 FTSIEVYEAYADFQDIMNLTEGIIQHAAKAVTGEGPIDYQGQLIHINEPFKRLHMVDA-- 326

Query: 294 RNPIIMHNVTEHFVHSEFRV-FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                +  VT      E     ++ L+      + A     G    AF +   E
Sbjct: 327 -----IKEVTGIDFWKEMSFEEARTLAQEKHVPLEAHFTTVGHIINAFFEEFVE 375



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      +  P       K N   +    +++L     E A+   
Sbjct: 365 IINAFFEEFVEET--LIQPTFVYGHPVEVSPLAKKNAEDARFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 423 ELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTN 482

Query: 553 AKNVREVSLFPMSQ 566
             ++R+V LFP  +
Sbjct: 483 TTSIRDVLLFPTMK 496


>gi|304406895|ref|ZP_07388549.1| asparaginyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304343882|gb|EFM09722.1| asparaginyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 433

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 73/298 (24%), Positives = 115/298 (38%), Gaps = 31/298 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
            G  V +  W+   R  G I FL +RD  G  Q     +      +E A+ +  E  L +
Sbjct: 16  AGESVTIGCWLQGKRSSGKIQFLKLRDGSGFIQGVLAKSEASEQAWEAAQKLTQESSLYV 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V                 ELS   IE++   E+ P+     +E+        R L L
Sbjct: 76  TGIVREEPRS-------PSGYELSVTGIEVIQYTEDYPITP---KEHGVDFLMDRRHLWL 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +V R +II +++       F     PILT SS EG  +       ++ ++  
Sbjct: 126 RSPKQRAILVIRAQIIRAVQQFFDESGFTLVDPPILTPSSCEGTTNLFHTKYFDEDAY-- 183

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ EM+FV+ +  L   
Sbjct: 184 LTQSGQLYMEAA-AMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVDHEQNLEVQ 242

Query: 254 ENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           E  +  V +               + S    V   F RI YD+AI     +  DL   
Sbjct: 243 EQFISFVVQSVLTNCKAELETIGRDISKLENVQVPFPRITYDEAIELLHKEGFDLPWG 300



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 48/144 (33%), Gaps = 7/144 (4%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL-LSIKAFQYD 483
            +++   F+  W  DF         +K D        P          D          D
Sbjct: 288 ELLHKEGFDLPWGEDFGAPHETAIAEKFDRPVFITHYPASFKAFYMKPDPNRPEVVLCAD 347

Query: 484 LVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           ++      EI  G  R     +M + F    +S    E  +       + G  PH G   
Sbjct: 348 MIAPEGYGEIIGGSQRIDDPALMAERFQEHELS----EEAYAWYLDLRRYGTVPHSGFGL 403

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G++R V  + G ++VRE   FP +
Sbjct: 404 GLERTVAWICGLEHVRETIAFPRT 427


>gi|300871937|ref|YP_003786810.1| lysyl-tRNA-synthetase LysU class II [Brachyspira pilosicoli
           95/1000]
 gi|300689638|gb|ADK32309.1| lysyl-tRNA-synthetase LysU class II [Brachyspira pilosicoli
           95/1000]
          Length = 510

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 67/338 (19%), Positives = 133/338 (39%), Gaps = 22/338 (6%)

Query: 4   YRTHSCGD--LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           Y++    +    +    + V ++G +   R  G   FL I+D  G  Q     D    E 
Sbjct: 51  YKSKDIAEQFEELEKNETEVAVAGRIMLYRVMGKSSFLTIKDSKGTIQAYIQKDKLGDEF 110

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             +V     L   G ++            TG+I + A ++++L+ +   PLP        
Sbjct: 111 YNTVFK--KLIDIGDIVGVKGTVF--KTKTGEITIYASELKLLTKSL-NPLPEKFHGLTD 165

Query: 122 ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
             +R++ R++DL  +  + +  +KR+++I+++R  MI  NF+E  TP++        A+ 
Sbjct: 166 TELRYRQRYVDLIMNDDVKEAFIKRSKMISAIREIMIENNFLEVETPMMHPLIGGAKAKP 225

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+        + Y L  AP+ Y + L+  GFD+ F++   FR+E   +   P EF  ++ 
Sbjct: 226 FVTHHNTLDMTLY-LRIAPELYLKRLIVGGFDKVFELNRNFRNEGISTRHNP-EFTMMEA 283

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            M++     ++  +E V   V  + +   T       I +     R           + M
Sbjct: 284 YMAYANFHKVMELVEEVFSKVCFKLNGKYTSQYKDYEINFKPPFAR-----------VPM 332

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            ++ +     +F             +   +      G 
Sbjct: 333 VDLVKEHSGLDFNSIQSDDEAISKAKSIGVEIDTSKGK 370



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   EEK I               S    D   I   +Y+L   G E+++G    +   
Sbjct: 381 FEEKVEEKLIQPTFVINYPKAVSPLSKSYPDNPDI-TERYELFIGGMEMSNGFSELNDPI 439

Query: 503 VMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F     +K   E+           A + G+PP GG+  GIDR+ +L L   ++R+
Sbjct: 440 DQKERFEEQLKAKARGEDETMDMDLDFINALEYGLPPTGGLGIGIDRMAILFLNVPSIRD 499

Query: 559 VSLFPMSQN 567
             LFP  + 
Sbjct: 500 TILFPQMRK 508


>gi|253732096|ref|ZP_04866261.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733299|ref|ZP_04867464.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|304380964|ref|ZP_07363622.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|253724143|gb|EES92872.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728839|gb|EES97568.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|304340489|gb|EFM06425.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320142699|gb|EFW34502.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
          Length = 432

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 77/322 (23%), Positives = 123/322 (38%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 11  KDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++S A + P+     + +       +R 
Sbjct: 71  LYVTGTITEDNRSDL-------GYEMQVKSIEVISEAHDYPITP---KNHGTEFLMDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +
Sbjct: 121 LWLRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 181 F--LSQSGQLYLEAA-AMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESL 237

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDAI      G D  +
Sbjct: 238 EIQEQYVTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIE 297

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 298 WGEDFGAPHETAIANHYDLPVF 319



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 31/194 (15%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE---- 433
            L +   E    +L+            D ++F            ++ G  +         
Sbjct: 256 KLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHYD 315

Query: 434 -FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFE 490
              +I ++P                PF M       E++   DL++ + +         E
Sbjct: 316 LPVFITNYP------------TKIKPFYMQPNPENEETVLCADLIAPEGYG--------E 355

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R    E++ Q     G+     E  +       + G  PH G   G++R V  +
Sbjct: 356 IIGGSERVDDLELLEQRVKEHGLD----EEAYSYYLDLRRYGSVPHCGFGLGLERTVAWI 411

Query: 551 LGAKNVREVSLFPM 564
            G ++VRE + FP 
Sbjct: 412 SGVEHVRETAPFPR 425


>gi|239814417|ref|YP_002943327.1| lysyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|259511538|sp|C5CSG3|SYK_VARPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|239800994|gb|ACS18061.1| lysyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 520

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 58/277 (20%), Positives = 116/277 (41%), Gaps = 20/277 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D     Q+    D+   E     +   +  I G     
Sbjct: 82  VSVAGRMMLKRVMGKASFATVQDATSRIQLYVTRDAIGEEAYAEFKRWDLGDIVG----- 136

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
            AE       TG++ +   K+ +L+ +   PLP        +  +++ R++DL  D   +
Sbjct: 137 -AEGTLMKTKTGELSVKVTKLRLLTKSLR-PLPDKFHGMADQEQKYRQRYVDLITDETAR 194

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
                R++ ++++R  M+   F+E  TP+L        A+ F           + L  AP
Sbjct: 195 VRFTARSKAVSALREFMVGHGFLEVETPMLHPIPGGANAKPFKTHHNALDQEMF-LRIAP 253

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   +R+E   S R   EF  ++   ++    D+++  E ++R
Sbjct: 254 ELYLKRLIVGGFERVFEINRSYRNEGI-SVRHNPEFTMMEFYAAYWNYRDLMDFTETLIR 312

Query: 259 GVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            + ++      ++           F R+   +AI +Y
Sbjct: 313 TIADKAVGTQQLTYQGKPVDLTQPFERLTIREAILKY 349



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           ++E   EEK        F M      S   + ND       +++L   G E  +G    +
Sbjct: 390 YFEETVEEKLWQPT---FIMEHPTEISPLARANDERPEVTERFELYITGREFGNGFSELN 446

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            +E     F+    +K+  ++          RA + GMPP GG   GIDR++MLL  + +
Sbjct: 447 DAEDQAARFNAQVAAKDSGDDEAMFYDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSPS 506

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 507 IRDVILFP 514


>gi|152990921|ref|YP_001356643.1| lysyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|151422782|dbj|BAF70286.1| lysyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 502

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 74/342 (21%), Positives = 137/342 (40%), Gaps = 16/342 (4%)

Query: 8   SCGDLGVSDVGSF-VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
              DL         V+L+G +  +R  G   F  I D  GI Q+  N DS   E  K V+
Sbjct: 45  YVKDLEEKKDEKACVKLNGRIKFLRHMGKAAFAKIEDESGIVQIYFNRDSLGDEWFKKVK 104

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G ++   A+       TG++ L A ++ +++ A  +PLP        + +R+
Sbjct: 105 K---LIEVGDIIE--AKGYPFVTKTGELTLHANELNLVTKA-IVPLPEKFHGLQDKELRY 158

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +  + K  + R+RI++ +R    +  F+E  TP++        AR F+   
Sbjct: 159 RQRYVDLIMNPEVKKVFMLRSRIVSLIRDFFESHGFLEVETPMMHPIPGGANARPFITHH 218

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  GF+  F+I   FR+E   +   P EF  ++   ++ 
Sbjct: 219 NALGVDRY-LRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDATHNP-EFTMIEFYWAYH 276

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             +D++   E++   +FE+ S    ++     I +     +       +    +  ++ E
Sbjct: 277 TYEDLMKLTEDLFDYLFEKLSLPKKLTYGEHTIDFSTPFSKIKYKDAIIEIGEVPEDIVE 336

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                +       L        +A     G       D   E
Sbjct: 337 -----DKEKIISFLKDKGIEPEFAHKMSLGALQAELFDNFVE 373



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 54/157 (34%), Gaps = 26/157 (16%)

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  +      +        +I  FP                            + +
Sbjct: 360 LGALQAELFD--NFVEEKLINPTFITHFPI---------------------DISPLARRS 396

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF---GGLYRAF 529
           D     A +++L   G EIA+G    +      + F     +KEV +          RA 
Sbjct: 397 DENPEIAERFELFIAGKEIANGFNELNDPLDQYERFKAQVQAKEVDDEAMHMDEDFVRAL 456

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             GMPP  G   GIDR+VMLL    ++R+V LFP  +
Sbjct: 457 GYGMPPTAGEGIGIDRLVMLLTNQHSIRDVILFPAMK 493


>gi|67922046|ref|ZP_00515562.1| Asparaginyl-tRNA synthetase, class IIb [Crocosphaera watsonii WH
           8501]
 gi|67856262|gb|EAM51505.1| Asparaginyl-tRNA synthetase, class IIb [Crocosphaera watsonii WH
           8501]
          Length = 463

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 72/392 (18%), Positives = 127/392 (32%), Gaps = 47/392 (11%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M   R      L        V + GWV   R      F+++ D   +  +    D +  +
Sbjct: 1   MQTKRVRDI--LRHGQPDETVTIQGWVRTKRELKDFSFMEVNDGSSLNSLQVVLDESVPD 58

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               ++    L   G  +  S   + +     +IEL A  +++   ++    P+  +R  
Sbjct: 59  YQDVLK----LLNTGSSVEVSGTLVQSLGKGQKIELKAATVQVYGTSDPETYPLQKKRHS 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R     L  R +T+   +  R     ++       +F+   TPI+TAS  EGA + 
Sbjct: 115 FEFLR-TIGHLRSRTNTIGAVMRVRNACATAIHNFFQERDFMWVHTPIITASDCEGAGEL 173

Query: 181 LVPSRVNQ--------------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
              +  +                 F+   A      Q +  +MA  F   +   P FR E
Sbjct: 174 FTVTNFDLSKIPVDKQEKIDYSQDFFGKQAYLTVSGQLEAEVMAMSFQNVYTFGPTFRAE 233

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------ 271
           +  + R   EF+ ++ EM+F + +   +  E  L+ +F+                     
Sbjct: 234 NSNTSRHLAEFWMVEPEMAFCDIEGDQDLAEEFLKYIFKYVLETCPEDMEFFNKRIDKSV 293

Query: 272 ---------NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
                    N F RI Y  AI             +   +   +EH  +    +F K L V
Sbjct: 294 LETADNIINNEFERITYTKAIELLEKCNKKFEYAVEWGIDLQSEHERYLAEELFKKPLIV 353

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
                           N      M+  A   G
Sbjct: 354 TNYPAAIKAFYMRLNDNEKTVAAMDVLAPKIG 385



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 61/187 (32%), Gaps = 31/187 (16%)

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
           N          +++ +  +  F           +   R ++A+EL        +   + +
Sbjct: 303 NEFERITYTKAIELLEKCNKKFEYAVEWGIDLQSEHER-YLAEELFK------KPLIVTN 355

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           +P             A   F M        + ND     A    L     EI  G  R  
Sbjct: 356 YP------------AAIKAFYM--------RLNDNEKTVAAMDVLAPKIGEIIGGSQREE 395

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             +V+ +  + + I  + +           + G  PH G   G +R+V  + G  N+R+V
Sbjct: 396 RLDVLERRINEMEIIPDDLW----WYLDLRKYGTVPHAGFGLGFERVVQFMTGMGNIRDV 451

Query: 560 SLFPMSQ 566
             FP + 
Sbjct: 452 IPFPRTP 458


>gi|329767267|ref|ZP_08258794.1| lysyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836934|gb|EGF86581.1| lysyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 499

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 64/359 (17%), Positives = 136/359 (37%), Gaps = 43/359 (11%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH    +           + +    V ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHLSDQIVAEYDKFSKEELEEKNISVTIAGRIMTKRGKGKAGFAHVQDLGGQVQIYVRQ 99

Query: 55  DSAC--FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           D     +E  K++    ++ + G++   +          G++ + A K EIL+ A   PL
Sbjct: 100 DRVGDSYEYFKTLDLGDIVGVTGVLFKTNV---------GELSVKADKFEILTKALR-PL 149

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA 171
           P           R++ R++DL  +   K   + R++II  MR  +    ++E  TP++ +
Sbjct: 150 PDKFHGLKDVEERYRRRYVDLIMNEDSKETFILRSKIIQIMRSYLNERGYLEVETPMMHS 209

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +    AR F+          + +  A +   + L+  G ++ ++I   FR+E   +   
Sbjct: 210 VAGGAAARPFVTHHNALDMQLF-MRIALELPLKRLIVGGLEKVYEIGRAFRNEGVSTRHN 268

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  +++  ++ + +DI++  E+++  +  E                      YG D+
Sbjct: 269 P-EFTMIELYEAYADYNDIMDLTESMIAYICNEIHGTTK--------------IMYGEDE 313

Query: 291 PDL---RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
            DL      + M +  +     +F         +   +   +P +         +   E
Sbjct: 314 IDLTPKWRRVHMVDAIKEVTGVDFWPEMTDAEAHALAKEHNVPVRKDMKVGHIINEFFE 372



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 4/93 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMP 534
             +++L     E A+     +      + F      K+     V         A + GMP
Sbjct: 406 TDRFELFIVRREHANAFSELNDPIDQKERFLAQMDEKDAGNEEVYEMDEDFVEALEYGMP 465

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           P GG+  GIDR+VMLL  + ++R+V LFP  ++
Sbjct: 466 PTGGLGIGIDRLVMLLTNSASIRDVLLFPYMKH 498


>gi|297529658|ref|YP_003670933.1| asparaginyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252910|gb|ADI26356.1| asparaginyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 431

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 74/297 (24%), Positives = 121/297 (40%), Gaps = 32/297 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEI 61
           +T +  ++    VG  V +  W+   R  G I+FL +RD  G  Q     AN     F+ 
Sbjct: 2   KTTTIAEVN-QYVGQQVTIGAWLANKRSSGKIVFLQLRDGTGFIQGVAEKANVSEEVFQR 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK++  E  L + G V                 ELS   ++++  A + P+     +E+ 
Sbjct: 61  AKTLTQETSLYVTGTVRIDERSPF-------GYELSVADLQVIQEAVDYPITP---KEHG 110

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +R L LR    H  +  R  II +         F++   PILT S+PEG  +  
Sbjct: 111 VEFLMDHRHLWLRSRRQHAIMKIRNEIIRATYEFFNDRGFVKVDAPILTGSAPEGTTELF 170

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                ++ ++  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 171 HTKYFDEDAY--LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMVEPEM 227

Query: 242 SFVEQDDILNTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283
           +F E +D L   E  +  + +               + S    V   F R+ YD+AI
Sbjct: 228 AFYEFEDNLRLQEEYVSYLVQSVLERCRLELGRLGRDVSKLELVKPPFPRLTYDEAI 284



 Score = 70.5 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 49/166 (29%), Gaps = 21/166 (12%)

Query: 401 FIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
               + +K              + G  +       +  D P +           +  PF 
Sbjct: 278 LTYDEAIKLLHEKGLTDIEWGDDFGAPHETAIAESF--DKPVF-----ITHYPTSLKPFY 330

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           M          N    +     DL+      EI  G  R H   ++ +      +  E  
Sbjct: 331 MQPD------PNRPDVVLCA--DLIAPEGYGEIIGGSERIHDYVLLKRRLEEHHLPLEAY 382

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           E          + G  PH G   G++R V  + G ++VRE   FP 
Sbjct: 383 E----WYLDLRKYGSVPHSGFGLGLERTVAWICGVEHVRETIPFPR 424


>gi|325829779|ref|ZP_08163237.1| lysine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325487946|gb|EGC90383.1| lysine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 647

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 70/343 (20%), Positives = 131/343 (38%), Gaps = 29/343 (8%)

Query: 6   THSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           +H   DL                V+++G V   R  G + FL++RD  G  Q+    ++ 
Sbjct: 42  SHHLADLAEQYADLEDGASTEDEVKVAGRVMAKRDQGKLAFLELRDSTGDMQLFCRINAL 101

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             +    ++   V    G+      E        GQ+ +S    E+LS +   PLP    
Sbjct: 102 GEDAFAELKDLDVGDWIGV------EGTMMRTKRGQLSVSVASFELLSKSLR-PLPEKFH 154

Query: 118 REYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPE 175
               +  R++ R++DL     +     KR ++++++R  M    + E  TPIL       
Sbjct: 155 GLADKETRYRQRYVDLVMNREVRDTFEKRFKVVSAIRRYMEDHGYYEVETPILHPILGGA 214

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+         FY L  A + + + L+  GF++ F+I   FR+E       P EF 
Sbjct: 215 NARPFVTHHNALDKDFY-LRIATELHLKRLLVGGFEKVFEIGRQFRNEGMDPYHNP-EFT 272

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVF---------EEFSNGNTVSNNFLRICY-DDAIRR 285
            ++   +F + + ++   + V++            E   +   +S ++ R    + A   
Sbjct: 273 TMEFYQAFSDLEGMMELTQGVIQAAALASCGTLQVEYQGHQVDLSGSWRRATMIELASEG 332

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            G D    R    + ++ E         + K   +   +E  A
Sbjct: 333 AGEDVSFQRTRDELVDILERNGGHAEAAWGKGKLIAEIFEAVA 375



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 11/132 (8%)

Query: 443 YEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           +E   EEK I       +P  +    +      D       +++L   G E A+     +
Sbjct: 371 FEAVAEEKLIQPTFVTEHPIEVSP--LAKKLAGDPN--LTERFELFICGHEYANAFGELN 426

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F     +K++ ++          RA + GMPP GG   GIDR+VMLL  A +
Sbjct: 427 DPVDQAERFRAQVEAKDLGDDEAMGYDDDYVRALEYGMPPAGGCGIGIDRLVMLLTDAPS 486

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  ++
Sbjct: 487 IRDVLLFPHMRD 498


>gi|295676933|ref|YP_003605457.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295436776|gb|ADG15946.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 518

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 66/306 (21%), Positives = 119/306 (38%), Gaps = 30/306 (9%)

Query: 6   THSCGDLGV--SDVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL                  V ++G +   R  G   F  +RD  G  Q    P 
Sbjct: 53  THHAEDLQSQYEHTDKEALEANPLEVAIAGRMMLKRVMGKASFATVRDGSGQIQFFITPA 112

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +LS +   PLP  
Sbjct: 113 DVGQETYDAFKKWDMGDI------VAARGVLFRTNKGELSVRCTELRLLSKSLR-PLPDK 165

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + ++++ R++DL       +  V RT+ I+S+R  M   NF+E  TP+L     
Sbjct: 166 FHGLADQEMKYRQRYVDLIVTPETRRTFVARTKAISSIRKYMADANFMEVETPMLHPIPG 225

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F           + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 226 GAAAKPFSTHHNALDMQMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SVRHNPE 283

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T++           F R+    AI+
Sbjct: 284 FTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTATITYQGRELDLSKPFHRLTITQAIQ 343

Query: 285 RYGTDK 290
           +Y    
Sbjct: 344 KYAPQY 349



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +  +      +    + + +D ++    +++L   G EIA+G    +  
Sbjct: 388 LFEETAESQLWEPTYIIDYPIEVSPLA-RASDKVAGITERFELFITGREIANGFSELNDP 446

Query: 502 EVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      K+  +           RA + GMPP GG   GIDR+VM+L  + ++R
Sbjct: 447 EDQAARFKKQVDQKDAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLVMMLTDSPSIR 506

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 507 DVILFP 512


>gi|78355146|ref|YP_386595.1| asparaginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123755034|sp|Q317J6|SYN_DESDG RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|78217551|gb|ABB36900.1| asparaginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 461

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 124/359 (34%), Gaps = 49/359 (13%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE 60
             RT     L  S     +R+ GWV   R   G  FL++ D   +   QV+ + ++  + 
Sbjct: 1   MKRTQILDALNASAPCDDIRICGWVRTRRDAKGFSFLELNDGSCLTNIQVIVDEETDAYR 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                 +   + I G ++    +         + E+ A  + +L  A+    P+  +R  
Sbjct: 61  SVGEATTGASVDIRGQLVESPGKG-------QKWEVRAATMTLLGKADPETFPLQKKRHS 113

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R     L  R +        R     ++        F    TPILT S  EGA + 
Sbjct: 114 DEYLR-TIAHLRPRTNKFGAAFRIRAEASYAVHSFFRENGFFNVHTPILTGSDCEGAGEM 172

Query: 181 LVPSR-------------VNQGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
              +              V  G F+          Q +  +MA    + +   P FR E+
Sbjct: 173 FRVTTLPAVGASAPAEGSVFDGDFFGKECSLTVSGQLEAEIMAQSLGKVYTFGPTFRAEN 232

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG----------------- 267
             + R   EF+ ++ EM+F + +D +   E++++ V                        
Sbjct: 233 SNTPRHAAEFWMVEPEMAFADLEDDMQLAEDMVKYVISHVMKHCAADLDLFCKFVDKELS 292

Query: 268 ----NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSV 320
               N +++ F R+ Y +AI            P        TEH  +     F K ++V
Sbjct: 293 ARLENILAHPFARVSYTEAIEILKASGRKFEYPAEWGADLQTEHERYLAEEHFKKPVAV 351



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+      +G + +             + 
Sbjct: 366 NDDGKTVAAMDLLVPRIGELVGGSQREERLDVLEARIKELGQNPDDYW----WYLELRKF 421

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G  PH G   G +R++MLL G  N+R+V  FP +  
Sbjct: 422 GTAPHAGFGMGFERLLMLLTGIGNIRDVIPFPRTPR 457


>gi|319763832|ref|YP_004127769.1| lysyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|330823904|ref|YP_004387207.1| lysyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|317118393|gb|ADV00882.1| lysyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|329309276|gb|AEB83691.1| lysyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 515

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 67/327 (20%), Positives = 132/327 (40%), Gaps = 27/327 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY-----GITQVVANPDS 56
            RY       L   DV   V ++G +   R  G   F  ++D       G  Q+    D 
Sbjct: 55  QRYGALDAEALEAQDV--AVSVAGRMMLKRVMGKASFATLQDGSLGETGGRIQLYVTRDG 112

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              ++    +   +  I G      AE       TG++ +   ++ +L+ +   P+P   
Sbjct: 113 VGEDVYADFKRWDLGDIVG------AEGTLMKTKTGELSVKVTRLRLLTKSLR-PMPDKF 165

Query: 117 EREYPESIRFKYRFLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
                + ++++ R++DL  D    +  V R++ I  +R  MI   F+E  TP+L      
Sbjct: 166 HGVADQEVKYRQRYVDLMTDEAARRRFVARSKAIGGIRAFMIEHGFLEVETPMLHPIPGG 225

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+      +   + L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF
Sbjct: 226 ANARPFVTHHNALEQEMF-LRIAPELYLKRLIVGGFERVFEINRNFRNEGI-SVRHNPEF 283

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRR 285
             ++   ++    D+++  E ++R    + ++   ++           F R+   +AI +
Sbjct: 284 TMMEFYAAYWNYRDLMDFTEELVRDAALKATDTLQLTYGGRAVDLSQPFARLTIREAIYQ 343

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           Y      + +   + +  +    +E +
Sbjct: 344 YTEAGAHVDDAAWLVSALKKLGMTEEK 370



 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           ++E   E+K        F M      S   + NDL      +++L   G E  +G    +
Sbjct: 385 YFEEEVEDKLWQPT---FIMEHPTEISPLARANDLRPEVTERFELYITGREFGNGFSELN 441

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            +E     F+    +K+  ++          RA + GMPP GG   GIDR++MLL  + +
Sbjct: 442 DAEDQAARFNAQVAAKDSGDDEAMFFDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSPS 501

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 502 IRDVILFP 509


>gi|294338844|emb|CAZ87178.1| Lysyl-tRNA synthetase, heat inducible (Lysine--tRNA ligase) (LysRS)
           [Thiomonas sp. 3As]
          Length = 509

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 63/290 (21%), Positives = 120/290 (41%), Gaps = 20/290 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +   G  VR++G +   R  G   F  ++D  G  Q+  + D    E   + +   +   
Sbjct: 62  LEAAGVRVRVAGRMMLKRVMGKASFATLQDGTGRIQIHVSNDVTGEEAHAAFKHYDLGDW 121

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G       + +     TG++ + A+++ +L  +   PLP           R++ R++DL
Sbjct: 122 IGC------DGVLFKTRTGELTIRAEQVRLLVKSLR-PLPDKFHGLEDVETRYRQRYVDL 174

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
                  +    R++ I ++R  M+A  F+E  TP+L        A+ F+          
Sbjct: 175 IVTPESRERFALRSKAIAALRNEMLAAGFMEVETPMLHPIPGGAAAKPFITHHNALDQQM 234

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D ++
Sbjct: 235 Y-LRIAPELYLKRLLVGGFERVFEINRNFRNEGL-SPRHNPEFTMMEFYAAWWTYRDQMD 292

Query: 252 TMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
             E ++R   +       +++          F R+    AI+++  D  D
Sbjct: 293 FTEALIRNTAQLTCGTAVLTHQGRTLDLSAPFARLTLTQAIQKHAPDYTD 342



 Score =  102 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 27/155 (17%)

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  + ++  +     +E  +I+D+P                            +  
Sbjct: 372 LGALQLALFEQ--VAEHMLWEPTFIVDYP---------------------VEVSPLARAA 408

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRA 528
           D  +    +++L   G EIA+G    +  E     F +   +KE  ++          RA
Sbjct: 409 DADANTTERFELFITGREIANGFSELNDPEDQAARFQSQVQAKEAGDDEAMYFDADYVRA 468

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            + GMPP GG   GIDR+VMLL  A ++R+V LFP
Sbjct: 469 LEYGMPPAGGCGIGIDRLVMLLTDAPSIRDVILFP 503


>gi|320140374|gb|EFW32230.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
          Length = 432

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/322 (23%), Positives = 123/322 (38%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 11  KDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++S A + P+     + +       +R 
Sbjct: 71  LYVTGTITEDNRSDL-------GYEMQVKSIEVISEAHDYPITP---KNHGTEFLMDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +
Sbjct: 121 LWLRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 181 F--LSQSGQLYLEAA-AMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESL 237

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  + +       +                  F RI YDDAI      G D  +
Sbjct: 238 EIQEQYVTHIVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIE 297

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 298 WGEDFGAPHETAIANHYDLPVF 319



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 31/194 (15%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE---- 433
            L +   E    +L+            D ++F            ++ G  +         
Sbjct: 256 KLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHYD 315

Query: 434 -FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFE 490
              +I ++P                PF M       E++   DL++ + +         E
Sbjct: 316 LPVFITNYP------------TKIKPFYMQPNPENEETVLCADLIAPEGYG--------E 355

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R    E++ Q     G+     E  +       + G  PH G   G++R V  +
Sbjct: 356 IIGGSERVDDLELLEQRVKEHGLD----EEAYSYYLDLRRYGSVPHCGFGLGLERTVAWI 411

Query: 551 LGAKNVREVSLFPM 564
            G ++VRE + FP 
Sbjct: 412 SGVEHVRETAPFPR 425


>gi|49483643|ref|YP_040867.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257425520|ref|ZP_05601945.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428179|ref|ZP_05604577.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430809|ref|ZP_05607191.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433567|ref|ZP_05609925.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436409|ref|ZP_05612456.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|258422514|ref|ZP_05685422.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|282904037|ref|ZP_06311925.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282905802|ref|ZP_06313657.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282911033|ref|ZP_06318835.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914245|ref|ZP_06322032.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282919168|ref|ZP_06326903.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282924352|ref|ZP_06332026.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|283958219|ref|ZP_06375670.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293501271|ref|ZP_06667122.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510232|ref|ZP_06668940.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|293526827|ref|ZP_06671511.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295427964|ref|ZP_06820596.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|59798534|sp|Q6GGV5|SYN_STAAR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|49241772|emb|CAG40463.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257271977|gb|EEV04115.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275020|gb|EEV06507.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278937|gb|EEV09556.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281660|gb|EEV11797.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284691|gb|EEV14811.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|257847271|gb|EEV71277.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|282313739|gb|EFB44132.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316978|gb|EFB47352.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322313|gb|EFB52637.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282324728|gb|EFB55038.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282331094|gb|EFB60608.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595655|gb|EFC00619.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790368|gb|EFC29185.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920385|gb|EFD97449.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096276|gb|EFE26537.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467176|gb|EFF09694.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|295128322|gb|EFG57956.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|315195352|gb|EFU25739.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 430

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 77/322 (23%), Positives = 123/322 (38%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 9   KDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++S A + P+     + +       +R 
Sbjct: 69  LYVTGTITEDNRSDL-------GYEMQVKSIEVISEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +
Sbjct: 119 LWLRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 179 F--LSQSGQLYLEAA-AMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESL 235

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDAI      G D  +
Sbjct: 236 EIQEQYVTHVVKSVLENCKLELKMLERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 296 WGEDFGAPHETAIANHYDLPVF 317



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 31/194 (15%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE---- 433
            L +   E    +L+            D ++F            ++ G  +         
Sbjct: 254 KLELKMLERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHYD 313

Query: 434 -FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFE 490
              +I ++P                PF M       E++   DL++ + +         E
Sbjct: 314 LPVFITNYP------------TKIKPFYMQPNPENEETVLCADLIAPEGYG--------E 353

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R    E++ Q     G+     E  +       + G  PH G   G++R V  +
Sbjct: 354 IIGGSERVDDLELLEQRVKEHGLD----EEAYSYYLDLRRYGSVPHCGFGLGLERTVAWI 409

Query: 551 LGAKNVREVSLFPM 564
            G ++VRE + FP 
Sbjct: 410 SGVEHVRETAPFPR 423


>gi|218961955|ref|YP_001741730.1| lysyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167730612|emb|CAO81524.1| lysyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 498

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 71/345 (20%), Positives = 133/345 (38%), Gaps = 27/345 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGS-----FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           +  YRTH   DL             V ++G +  +R  G I F D+ D  G  Q+    +
Sbjct: 29  IKSYRTHYISDLLKDKEEQLQKAEEVTITGRLTAMRRQGKIGFGDLEDISGKIQLYVAQN 88

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E  +  +    LC  G  +  + +T      TG+  L    I++LS        V 
Sbjct: 89  LIGEENYELFK----LCDPGDFIQATGKTFFTQ--TGEYSLKCNNIKLLSKNIRPLPAVK 142

Query: 116 GE----------REYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIEC 164
            +                +R++ R+LDL  +  H+ +   R +II ++R  M +  ++E 
Sbjct: 143 EKIVDGKKIRYDEFSDIELRYRKRYLDLLLNPEHRKVFETRAKIITAIRNFMDSRGYVEV 202

Query: 165 STPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            TPIL        AR F+          Y L  A + Y + L+  GF++ +++   FR+E
Sbjct: 203 ETPILQPLYGGANARPFITHHNTLDMDLY-LRIATELYLKRLIVGGFEKVYELGKDFRNE 261

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
                  P EF  ++   ++ + + +++  E +++ +  +    +T   +  ++C     
Sbjct: 262 GMDRTHNP-EFTMIEFYEAYSDLEGMMDIAEELIKHLALDIIGKDTFFYHNHQVCLSGEW 320

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           +R     PDL +  +  NV          +      V P      
Sbjct: 321 KR--ASLPDLVSEFVGQNVMNISFEELSTICKNKELVIPPGSEKG 363



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 4/102 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM----LQAFSNVGISKEVVENRFGGL 525
           K        A +++L   G E A+     +          +      +  +         
Sbjct: 396 KAKPENPFVADRFELFIAGGEFANAFSELNDPLEQRVRLEEQAKLRALGIDDANVVDEDF 455

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             A + GMPP GG   GIDR+VMLL    +++EV LFP  + 
Sbjct: 456 LEALEYGMPPMGGQGIGIDRLVMLLTENDSIKEVILFPQMKT 497


>gi|269469091|gb|EEZ80642.1| lysyl-tRNA synthetase, class II [uncultured SUP05 cluster
           bacterium]
          Length = 496

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 65/287 (22%), Positives = 121/287 (42%), Gaps = 21/287 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L   +V   V ++G +   R  G   F  ++D     Q+ A  D            +W 
Sbjct: 51  ELEEKNV--EVSVAGRMMLKRVMGKASFATLQDSSAKIQIFATRDELPEGFYNEQFKKWD 108

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           +   G ++         N+  G++ +   +I++L+ +   PLP        + IR++ R+
Sbjct: 109 I---GDIIGAVGTLFKTNV--GELSIRISQIKLLTKSLR-PLPEKFHGLADQEIRYRQRY 162

Query: 131 LDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQ 188
           +DL      +N+  +R++I+  +R      +FIE  TP+L T      A+ F        
Sbjct: 163 VDLIVSEDSRNVFKRRSQIVAYIRNFFNEFDFIEVETPMLQTIPGGATAKPFETHHNALD 222

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  AP+ Y + L+  G D+ F+I   FR+E   +   P EF  ++   ++    D
Sbjct: 223 IGMY-LRIAPELYLKRLIVGGMDKVFEINRNFRNEGLSTRHNP-EFTMIEFYQAYATYHD 280

Query: 249 ILNTMENVLRGVFEEFSNG---------NTVSNNFLRICYDDAIRRY 286
           +++  E + RG+  +                S +F RI   D+I +Y
Sbjct: 281 LMDLTEQLFRGIAVDVCGNSSIHYQGDDFDFSKSFDRISVFDSILKY 327



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 6/150 (4%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++LGI   + +          +E   EEK I         P       + ND       
Sbjct: 345 AEKLGIQVKDNWGLGK-TQIEIFEATVEEKLIQPT-FITEYPTEVSPLARRNDNNPFITD 402

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPH 536
           +++L   G EIA+G    + +E     F      K+  ++          RA + GMPP 
Sbjct: 403 RFELFIGGREIANGFSELNDAEDQATRFKAQVAEKDAGDDEAMHYDADYIRALEYGMPPT 462

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G   GIDR+VML   + ++R+V LFP  +
Sbjct: 463 AGEGIGIDRLVMLFTDSPSIRDVLLFPHMR 492


>gi|126697148|ref|YP_001092034.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166229814|sp|A3PFA8|SYK_PROM0 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|126544191|gb|ABO18433.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 512

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 67/314 (21%), Positives = 130/314 (41%), Gaps = 19/314 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVM 78
           V L+G V   R  G I F  I D  G  Q+       +   E  K +  E +  I  +  
Sbjct: 53  VSLAGRVMAKRVMGKIAFFTISDQDGQIQLYLEKRIINLNLEKQKLLSFEDIKEIVDIGD 112

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                        G++ +  +K E+LS + + PLP           R++ R+LDL  +  
Sbjct: 113 WIGVYGTIKKTNKGELSIKVEKWEMLSKSLQ-PLPDKWHGLTDIEKRYRQRYLDLIVNPH 171

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQ 196
            KN+ K R + I+ +R  +   NF+E  TPIL + +    AR F+          Y L  
Sbjct: 172 SKNVFKTRAKCISFIRKWLDNRNFLEIETPILQSEAGGAEARPFITHHNTLDIPLY-LRI 230

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + ++  GF++ +++   FR+E   +   P EF  +++  ++ +  D++N  E +
Sbjct: 231 ATELHLKRMVVGGFEKVYELGRIFRNEGISTRHNP-EFTSVEIYEAYSDYVDMMNLTEEL 289

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS- 315
           ++ +  +     T++     I +     R           I M ++ + +   +F  F+ 
Sbjct: 290 IKDILADACGSLTINYQNKEIDFSKPWLR-----------ISMKDIVKKYTGIDFHSFNG 338

Query: 316 KILSVNPGYEVWAI 329
             L+     +   +
Sbjct: 339 DFLAAKKAVKNINV 352



 Score = 85.1 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 63/194 (32%), Gaps = 31/194 (15%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-----IINCNCFE 433
           +  +  +   +     +GD              F+    N I + L       +     E
Sbjct: 321 MKDIVKKYTGIDFHSFNGDFLAAKKAVKNINVDFSNKV-NTIGRLLNEVFEQKVESKLIE 379

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             +++D+P      E   +   H                        +++L   G E+A+
Sbjct: 380 PTFVIDYPV-----EISPLARPHF----------------DNKEIVQRFELFIVGRELAN 418

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVML 549
                       +        ++  +            A + GMPP GG+  GIDR++ML
Sbjct: 419 AFSELIDPVDQRERMQLQQSLRDKGDLEAHCIDEDFLNALEIGMPPTGGLGIGIDRLIML 478

Query: 550 LLGAKNVREVSLFP 563
           +  + ++R+V  FP
Sbjct: 479 ITNSASIRDVIPFP 492


>gi|295106037|emb|CBL03580.1| Lysyl-tRNA synthetase (class II) [Gordonibacter pamelaeae 7-10-1-b]
          Length = 660

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 60/289 (20%), Positives = 112/289 (38%), Gaps = 19/289 (6%)

Query: 6   THSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           +H   DL     G          V+++G +   R  G + FL++RD  G  Q+    ++ 
Sbjct: 44  SHHLADLAAQYEGLEDGASTSDEVKVAGRIMAKRDQGKLAFLELRDSSGDMQLFCRINAL 103

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             +    ++   V    G+               GQ+ ++    E+LS +   PLP    
Sbjct: 104 GEDAFAELKDLDVGDWIGV------RGTMMRTKRGQLSVAVDSFELLSKSLR-PLPEKFH 156

Query: 118 REYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPE 175
               +  R++ R++DL     +     KR +I+ ++R  M    + E  TPIL       
Sbjct: 157 GLADKETRYRQRYVDLVMNPEVKSTFEKRFKIVAAIRRYMEDHGYYEVETPILHPILGGA 216

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+         FY L  A + + + L+  GF++ F+I   FR+E       P EF 
Sbjct: 217 NARPFVTHHNALDKDFY-LRIATELHLKRLIVGGFEKVFEIGRQFRNEGMDPYHNP-EFT 274

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            ++   +F + + ++   + V++           V     ++      R
Sbjct: 275 TMEFYQAFSDLEGMMELTQGVVQAAAMAACGTTQVEYQGQQVDLGGTWR 323



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 11/132 (8%)

Query: 443 YEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           +E   EEK I       +P  +    +   K  +       +++L   G E A+     +
Sbjct: 373 FEAVAEEKLIQPTFVTEHP--LEVSPLAKKKAGEPE--LTERFELFICGHEYANAFGELN 428

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F     +K++ ++          RA + GMPP GG   GIDR+ MLL  A +
Sbjct: 429 DPIDQAERFRKQVEAKDLGDDEAMGYDDDYVRALEYGMPPAGGCGIGIDRLAMLLTDAPS 488

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  ++
Sbjct: 489 IRDVLLFPHMRD 500


>gi|256831144|ref|YP_003159872.1| lysyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256580320|gb|ACU91456.1| lysyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 502

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 64/311 (20%), Positives = 120/311 (38%), Gaps = 30/311 (9%)

Query: 5   RTHSCGDLGVSD--VGSFV--------RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R+   GD+  +       V         L G +   R  G   F  I+D  G  QV A  
Sbjct: 39  RSAEIGDVLEAHGEKDENVLLQENLTFALCGRIMAHRSFGKATFFHIQDTSGKIQVYAQR 98

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E     +   +  I G+              TG++ + +  + +LS +   PLP 
Sbjct: 99  DDLGVEQYGVFKKFEIGDIVGV------SGALFRTKTGELTIKSAAVRLLSKS-MRPLPE 151

Query: 115 FGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                     R++ R++DL   D       KRT I+  +R  +    F+E  TP++   +
Sbjct: 152 KYHGLKDVETRYRQRYVDLLVNDRARDIFRKRTAIVQFIRNFLNERGFLEVETPMMQPIA 211

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GFDR ++I   FR+E   +   P 
Sbjct: 212 GGATAKPFRTHHNALDMDLF-LRIAPELYLKRLLVGGFDRVYEINRNFRNEGIDTRHNP- 269

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283
           EF  ++   ++    D+++  + +L  + +     + V            ++R+ + +++
Sbjct: 270 EFTMIEFYWAYATFVDLMDLTQELLGDLAKSVCGTHLVEYQGNVIDLQDGWVRMPFHESL 329

Query: 284 RRYGTDKPDLR 294
              G   P++ 
Sbjct: 330 EIIGGVSPEIY 340



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+   H  +  P       + ND       +++L   G E+A+     +        F
Sbjct: 376 EPKLIQPHFIYHYPTDISPLSRKNDANPEITDRFELFICGQEMANAFSELNDPYDQKDRF 435

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 K   ++          RA + GMPP  G   GIDR+VMLL  + ++REV LFP
Sbjct: 436 EEQVREKAAGDDEAHAMDEDYIRALEYGMPPAAGQGIGIDRLVMLLTDSPSIREVILFP 494


>gi|257791982|ref|YP_003182588.1| lysyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|317489991|ref|ZP_07948483.1| lysyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|257475879|gb|ACV56199.1| lysyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|316910989|gb|EFV32606.1| lysyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 647

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 70/343 (20%), Positives = 131/343 (38%), Gaps = 29/343 (8%)

Query: 6   THSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           +H   DL                V+++G V   R  G + FL++RD  G  Q+    ++ 
Sbjct: 42  SHHLADLAEQYADLEDGASTEDEVKVAGRVMAKRDQGKLAFLELRDSTGDMQLFCRINAL 101

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             +    ++   V    G+      E        GQ+ +S    E+LS +   PLP    
Sbjct: 102 GEDAFAELKDLDVGDWIGV------EGTMMRTKRGQLSVSVASFELLSKSLR-PLPEKFH 154

Query: 118 REYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPE 175
               +  R++ R++DL     +     KR ++++++R  M    + E  TPIL       
Sbjct: 155 GLADKETRYRQRYVDLVMNREVRDTFEKRFKVVSAIRRYMEDHGYYEVETPILHPILGGA 214

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+         FY L  A + + + L+  GF++ F+I   FR+E       P EF 
Sbjct: 215 NARPFVTHHNALDKDFY-LRIATELHLKRLLVGGFEKVFEIGRQFRNEGMDPYHNP-EFT 272

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVF---------EEFSNGNTVSNNFLRICY-DDAIRR 285
            ++   +F + + ++   + V++            E   +   +S ++ R    + A   
Sbjct: 273 TMEFYQAFSDLEGMMELTQGVIQAAALASCGTLQVEYQGHQVDLSGSWRRATMIELASEG 332

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            G D    R    + ++ E         + K   +   +E  A
Sbjct: 333 AGEDVSFQRTRDELVDILERNGGHAEAAWGKGKLIAEIFEAVA 375



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 11/132 (8%)

Query: 443 YEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           +E   EEK I       +P  +    +      D       +++L   G E A+     +
Sbjct: 371 FEAVAEEKLIQPTFVTEHPIEVSP--LAKKLAGDPN--LTERFELFICGHEYANAFGELN 426

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F     +K++ ++          RA + GMPP GG   GIDR+VMLL  A +
Sbjct: 427 DPVDQAERFRAQVEAKDLGDDEAMGYDDDYVRALEYGMPPAGGCGIGIDRLVMLLTDAPS 486

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  ++
Sbjct: 487 IRDVLLFPHMRD 498


>gi|82751053|ref|YP_416794.1| asparaginyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123754652|sp|Q2YY52|SYN_STAAB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|82656584|emb|CAI81007.1| asparaginyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 430

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 77/322 (23%), Positives = 124/322 (38%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 9   KDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++S A + P+     + +       +R 
Sbjct: 69  LYVTGTITEDNRSDL-------GYEMQVKSIEVISEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  +I +       + F +   PILTAS+PEG  +  +    +Q +
Sbjct: 119 LWLRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFLTKYFDQDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 179 F--LSQSGQLYLEAA-AMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESL 235

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDAI      G D  +
Sbjct: 236 EIQEQYVTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 296 WGEDFGAPHETAIANHYDLPVF 317



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 31/194 (15%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE---- 433
            L +   E    +L+            D ++F            ++ G  +         
Sbjct: 254 KLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHYD 313

Query: 434 -FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFE 490
              +I ++P                PF M       E++   DL++ + +         E
Sbjct: 314 LPVFITNYP------------TKIKPFYMQPNPENEETVLCADLIAPEGYG--------E 353

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R    E++ Q     G+     E  +       + G  PH G   G++R V  +
Sbjct: 354 IIGGSERVDDLELLEQRVKEHGLD----EEAYSYYLDLRRYGSVPHCGFGLGLERTVAWI 409

Query: 551 LGAKNVREVSLFPM 564
            G ++VRE + FP 
Sbjct: 410 SGVEHVRETAPFPR 423


>gi|91201443|emb|CAJ74503.1| strongly similar to lysyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 477

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 64/267 (23%), Positives = 117/267 (43%), Gaps = 19/267 (7%)

Query: 24  SGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDGLVMSR 80
           +G +  +RPHG  +FLDIRD  G  QV    D      FEI+  +    +L ++G +   
Sbjct: 52  AGRIMTMRPHGKTVFLDIRDRTGKIQVYIKRDKVGEDTFEISHLLDLGDILGVEGTL--- 108

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LH 139
                     TG+I + A  I +LS +  L  P          +R + R++DL  +  + 
Sbjct: 109 ------FKTRTGEITIFADNITLLSKSL-LNPPEKWHGLKDIELRHRQRYVDLFTNQDVM 161

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
           +  +KR +IIN +R  +   +F+E  TP++        AR F+          Y L  AP
Sbjct: 162 QTFLKRIQIINHIRAFLNERDFVEVETPMMQPIPGGAVARPFITHHNALDIDLY-LRIAP 220

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  G +R ++I   FR+E   +   P EF  +++  ++ + + ++   E ++ 
Sbjct: 221 ELYLKRLLVGGMERVYEINRNFRNEGISTRHNP-EFTMMELYQAYSDYNGMMELTEELIT 279

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRR 285
            +  +         +F  I  +     
Sbjct: 280 SLAMKIQGK--YELSFGEITVNMTPPW 304



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 67/182 (36%), Gaps = 24/182 (13%)

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL--GIINCNCFEFCWIMDFPF 442
           E ++    +   D    I             +R++IA  L   ++        +++D+P 
Sbjct: 311 ELLKEHSGISYDDEEGLIRKSKESGLETNGISRDNIANTLFEELVEKTLVNPTFVLDYP- 369

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
                            T     +     +D     A +++L     E+A+     + S 
Sbjct: 370 -----------------TSICP-LTKTCAHDPR--FAQRFELYIASMEVANSYSELNDSI 409

Query: 503 VMLQAFSNVGISKEVVENRFG-GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
              +       ++  +  +       A + GMPP GG+  GIDR++MLL    ++REV L
Sbjct: 410 EQDRRLHEQIGTETDITGKIDEDFLTALKYGMPPAGGLGIGIDRLIMLLTNNVSIREVIL 469

Query: 562 FP 563
           FP
Sbjct: 470 FP 471


>gi|13541921|ref|NP_111609.1| aspartyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|62287583|sp|Q979P6|SYD_THEVO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|14325352|dbj|BAB60256.1| tRNA synthetase Asp [Thermoplasma volcanium GSS1]
          Length = 428

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 22/302 (7%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
             G L   +    V + GW+  ++    + FL +RD  G  QV          + K +  
Sbjct: 5   YIGSLRELNHNDNVEIYGWLQDLKLLKNVSFLIMRDRTGTVQVTFKNTPDIVNLLKELPR 64

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRF 126
           E VL I G +  +S            +E+S + +E+L+ +E  LPLPV    +     R 
Sbjct: 65  ESVLKISGKINKKSVS-------KSGLEVSGESVEVLNRSERPLPLPVIDPVQADLETRL 117

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             RF+DLR+  +       + I+  +R  + ++ FIE  TP + A++ EG  D       
Sbjct: 118 NNRFIDLRKRDVSSIFNAESSILWGIREFLHSQGFIEVHTPKIVAAATEGGADLFPVKYF 177

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
              ++  L Q+PQ YK++LM+SGF++ F++ P FR E+  + R   EF  +D+EMSF + 
Sbjct: 178 ENDAY--LNQSPQLYKEILMSSGFEKVFEVGPAFRAEEHNTTRHLNEFTSIDIEMSFADH 235

Query: 247 DDILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAIRRYGTDKPDLR 294
           +D +  +EN ++   E   N N                 F RI Y + I+    +  + +
Sbjct: 236 NDAMRILENAVKSGIENMINENGKDLQENGINISIPEIPFPRITYKECIKLLEKEGLEFQ 295

Query: 295 NP 296
             
Sbjct: 296 FG 297



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 24/147 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL II  N  +F +I ++P                 +TMP     ++  +         
Sbjct: 303 EELRIIGRNFKDFYFITEWP-----------SSLRPFYTMPNRDDPTITNS--------- 342

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +DL     E+ SG  R H  +++L+ F+   ++     + F    +AF+ GMPPH G   
Sbjct: 343 FDLQYREVEVTSGAQRVHDPDLLLKRFNEKKLNI----DSFKFYIQAFKYGMPPHAGWGL 398

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNF 568
           G++R+ M++LG  N+RE +LFP  +  
Sbjct: 399 GLERLTMIVLGLNNIRETTLFPRDRTR 425


>gi|309778096|ref|ZP_07673034.1| lysine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914155|gb|EFP59957.1| lysine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 508

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 68/343 (19%), Positives = 126/343 (36%), Gaps = 29/343 (8%)

Query: 2   HRY-RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           H Y RTH  G++             +    V+++G +   R  G   F+ I+D  G  Q+
Sbjct: 43  HAYQRTHKSGEIRAAYENCTKEELEEQDLTVKIAGRIMTKRRQGKAGFMHIQDIDGQIQI 102

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    E  +  +   +  I G+      E        G++ + A+    L+ A   
Sbjct: 103 YVRKDVIGEEAYEIFKKSDLGDIVGI------EGKVMKTNHGELSVKAEVYTHLTKALR- 155

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           RF+ R++DL  +    +  + R RII +++  +  E  +E  TP+L
Sbjct: 156 PLPEKYHGLQDVEERFRRRYVDLITNENSKRIALTRPRIIRAIQNYLDGEGLVEVETPVL 215

Query: 170 TAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   AR F+         FY L  A +   + L+  G +  ++I   FR+E   + 
Sbjct: 216 QPILGGASARPFITHHNTLDMPFY-LRIATELPLKRLIVGGLEGVYEIGRLFRNEGMDAT 274

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  ++  +++ + + +++ +E +L  V E+      ++     I      +R   
Sbjct: 275 HNP-EFTTVEAYVAYSDLNGMMDLVEGLLNHVAEKVCGTTEIAWQDKTISLKAPFKRLHM 333

Query: 289 -------DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
                     D    +            +  V  K  SV    
Sbjct: 334 VDGIKEACGVDFWQQMSFEEACAIAKEHDIEVEKKHNSVGHII 376



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 11/133 (8%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   EE  I   +   +P  +    +      D     A +Y+L  +G E A+     
Sbjct: 379 FFEKYVEETLIQPTYVYGHPVEISP--LAKKNAQDPR--FADRYELFIDGHEYANAFSEL 434

Query: 499 HMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      + F N    +++ ++           A + G+PP GG+  GIDR+VMLL  ++
Sbjct: 435 NDPIDQRERFENQLKLRDLGDDEANEMDTDYVEALEYGLPPTGGVGLGIDRLVMLLTNSQ 494

Query: 555 NVREVSLFPMSQN 567
            +REV LFP  +N
Sbjct: 495 TIREVLLFPHMKN 507


>gi|315646475|ref|ZP_07899593.1| asparaginyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315278118|gb|EFU41438.1| asparaginyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 431

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 74/320 (23%), Positives = 122/320 (38%), Gaps = 33/320 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVL 71
             VG  V +  W++  R  G I FL +RD  G  Q   V +      ++ AKS+  E  L
Sbjct: 12  QHVGETVTIGAWINNKRSSGKIQFLQLRDGSGYIQGVVVKSEVSEQVWDDAKSLTQESSL 71

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G++                 E++   IEI+ + E  P+     +E+       +R L
Sbjct: 72  YVTGVIREEPRSQS-------GYEMTVTGIEIIHLTENYPITP---KEHGVDYLMDHRHL 121

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR       +V R  II +++       F     PILT +S EG  +        + ++
Sbjct: 122 WLRTQKQRAIMVIRAEIIRAVQAYFDTNGFTLVDPPILTPTSAEGTTNLFHTKYFEEDAY 181

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ EM+F + ++ L 
Sbjct: 182 --LTQSGQLYMEAA-AMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTDHEESLQ 238

Query: 252 TMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
             E  +  V +               + S    +   F RI YD+AI    T   D+   
Sbjct: 239 VQEQFISYVVQSVVKNCRQELEAIGRDISKLEAIQAPFPRITYDEAIEFLHTQGFDIPWG 298

Query: 297 IIMHNVTE--HFVHSEFRVF 314
                  E       +  VF
Sbjct: 299 EDFGAPHETAIAEKYDKPVF 318



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 47/138 (34%), Gaps = 7/138 (5%)

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY-DLVCN-- 487
            F+  W  DF         +K D        P G        D    +     D++    
Sbjct: 292 GFDIPWGEDFGAPHETAIAEKYDKPVFITHYPAGIKAFYMKPDPNRPEVVLCADMIAPEG 351

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             EI  G  R    +++ + F    +S E  +          + G  PH G   G++R V
Sbjct: 352 YGEIIGGSQRIDDPQLLEERFKEHELSMETYQ----WYMDLRKYGTVPHSGFGLGLERTV 407

Query: 548 MLLLGAKNVREVSLFPMS 565
             + G  +VRE   FP +
Sbjct: 408 AWICGLDHVRETIPFPRT 425


>gi|284165949|ref|YP_003404228.1| aspartyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284015604|gb|ADB61555.1| aspartyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 434

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 82/349 (23%), Positives = 150/349 (42%), Gaps = 43/349 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK- 63
           RT++      ++ G  V ++GWVH +R  GGI FL +RD  G  Q+    D    ++ + 
Sbjct: 4   RTYTAD----TEPGDDVTVAGWVHEIRDLGGIAFLILRDTSGKIQIKFEKDEMDDDLVET 59

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
                 E V+ + G V             TG +E++ + +E+++ A+   PL   G+ + 
Sbjct: 60  GLDASRESVVKVSGAVEEEP------RAPTG-VEVTPESVEVVAPADPELPLDPSGKVDA 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
             S R   R LDLR++ +      R+ ++N++R +    +  E +TP + A+  EG  + 
Sbjct: 113 DLSTRLDNRTLDLRKEDVQSVFEIRSGVLNAVRDQFREFDCTEINTPKIVATGTEGGTEL 172

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F    Q+PQ +KQL+  S  +R F+I P FR E+  + R   E   +D E
Sbjct: 173 FPITYFGEEAFMN--QSPQLFKQLIAGSNVERVFEIGPIFRAEEHNTPRHLNEATSIDFE 230

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRR- 285
            +F +  D ++  E +++  +E                        +F RI Y+ AI R 
Sbjct: 231 GAFCDHQDAMDVAEGIVKAAYEAVQENFGDELEAIGIADEFAVPEGDFPRISYEGAIERI 290

Query: 286 -----------YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
                      +G D        +  +V  H+  +++    K   +   
Sbjct: 291 NATGELDEQLVWGDDLSTPAEEALGQDVGGHYFITDWPSEIKPFYIKDH 339



 Score =  107 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 71/197 (36%), Gaps = 23/197 (11%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
             + +    I     + +GD         ++  +   +    +               W 
Sbjct: 258 FGDELEAIGIADEFAVPEGDFPRISYEGAIERINATGELDEQL--------------VWG 303

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMES---LKGNDLLSIKAFQYDLVCNGFEIASG 494
            D       EE    D   + F            +K +D     +  +DL+    E+ SG
Sbjct: 304 DD--LSTPAEEALGQDVGGHYFITDWPSEIKPFYIKDHDDDPELSTGFDLMHPRMELVSG 361

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           G R H  E +++ F   G+      ++F    + F+ GMPPH G   G +R++M LLG  
Sbjct: 362 GQREHRHEKLIEGFEQQGLDP----DQFEYYTKMFKYGMPPHAGFGLGGERLIMTLLGLD 417

Query: 555 NVREVSLFPMSQNFCDL 571
           N+RE  LFP  +     
Sbjct: 418 NIREAVLFPRDRQRLSP 434


>gi|283853281|ref|ZP_06370531.1| lysyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283571321|gb|EFC19331.1| lysyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 529

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 66/327 (20%), Positives = 119/327 (36%), Gaps = 18/327 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           RL+G +  +R  G + F  I+D  G  QV A  D    E  ++ +   +  I G+     
Sbjct: 91  RLAGRIVSLRSFGKVAFFTIQDASGRIQVFAERDKLGTEAYQTFKKFDIGDIVGV----- 145

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHK 140
                    TG++ L A  + +L+ +   PLP           R++ R++DL       +
Sbjct: 146 -SGRLFRTKTGELTLHADTVRLLTKS-MRPLPEKFHGLKDVETRYRQRYVDLIVTPKAVE 203

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
               RT I+  +R  +    F+E  TP++ A      A+ F+          + L  AP+
Sbjct: 204 IFKARTTIVRELRAFLDTAGFMEVETPMMQAIPGGATAKPFVTHHNALDMGLF-LRIAPE 262

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF++ +++   FR+E   +   P EF   +   ++    D+++  E +   
Sbjct: 263 LYLKRLLVGGFEKVYEVGRNFRNEGVSTRHNP-EFTMCEFYWAYARYTDLMDLTERLFSH 321

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           +    + G+ V+     I         G     L     +  V            +    
Sbjct: 322 LARAVTGGDVVTYQGQEI-------NLGLGWTRLAFHDSLEKVGGISPDVYRDFDAAKAL 374

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           V    E      K G       D   E
Sbjct: 375 VEKSGEKVLKGEKLGKVQAKLFDIFVE 401



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+   H  +  P       + N        +++L   G E+A+     +        F
Sbjct: 401 EPKLLQPHFIYHYPTEISPLSRRNSEDPTITDRFELFICGREMANAFSELNDPVDQRLRF 460

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +    KE  ++          RA + GMPP  G   GIDR+VMLL    ++REV LFP
Sbjct: 461 EDQVREKEAGDDEAHRMDDDYVRALEYGMPPAAGEGIGIDRLVMLLTDQASIREVILFP 519


>gi|260584307|ref|ZP_05852054.1| lysine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157825|gb|EEW92894.1| lysine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 501

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 62/334 (18%), Positives = 130/334 (38%), Gaps = 25/334 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+++G +   R  G   F  I+D  G  Q+    D    E  +      +    G ++ 
Sbjct: 65  TVQIAGRIMTKRGKGKAGFAHIQDGKGQIQIYVRKDVVGDEAYELFDKADL----GDIVG 120

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                +  N  TG++ + A +   L+ A   PLP           +++ R+LDL  +   
Sbjct: 121 VVGTVMVTN--TGELSVKATQFVHLTKALR-PLPDKYHGLTNVEQQYRQRYLDLISNRDS 177

Query: 140 K-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQA 197
               V R++II  +R  + + +++E  TP+L   +    AR F+          Y +  A
Sbjct: 178 MDRFVTRSKIIREIRHYLDSRDYLEVETPVLHTLAGGANARPFITHHNALDMELY-MRIA 236

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  D+++  E ++
Sbjct: 237 PELHLKRLVVGGMERVYEIGRVFRNEGIDTTHNP-EFTSIEIYTAYTDYQDVMDLTEGIV 295

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
             V +E      V               YG  + +L+ P    ++ +         F   
Sbjct: 296 SSVAQEVLGKTKVP--------------YGEYEVELKAPWKRVHMVDAIKEVTGVDFWVE 341

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           ++      +          +  +   +NE+  + 
Sbjct: 342 MTDEEARAIAKEKGVKVEDSMTYGHVVNEFFETF 375



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 74/202 (36%), Gaps = 7/202 (3%)

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
             +G           E       +   D+   + G          +AR  IA+E G+   
Sbjct: 301 EVLGKTKVPYGEYEVELKAPWKRVHMVDAIKEVTGVDFWVEMTDEEAR-AIAKEKGVKVE 359

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
           +   +  +++  F+E   EE  I      +  P       + ND       +++      
Sbjct: 360 DSMTYGHVVN-EFFETFVEETLIQPT-FIYGHPVAVSPLARKNDEDPRFTDRFECFICTK 417

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDR 545
           E A+G           + F      KE   +          +A + G+ P GG+  GIDR
Sbjct: 418 EYANGFTELTDPIDQRERFMKQVEEKETGNDEAHPLDEDFVQALEYGLSPTGGVGIGIDR 477

Query: 546 IVMLLLGAKNVREVSLFPMSQN 567
           +VMLL  ++++R V LFP  ++
Sbjct: 478 LVMLLTNSQSIRNVLLFPTMKH 499


>gi|297591066|ref|ZP_06949704.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|297575952|gb|EFH94668.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312438141|gb|ADQ77212.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 432

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 77/322 (23%), Positives = 123/322 (38%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 11  KDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEITQESS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++S A + P+     + +       +R 
Sbjct: 71  LYVTGTITEDNRSDL-------GYEMQVKSIEVISEAHDYPITP---KNHGTEFLMDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +
Sbjct: 121 LWLRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 181 F--LSQSGQLYLEAA-AMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESL 237

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDAI      G D  +
Sbjct: 238 EIQEQYVTHVVKSVLENCKLELKMLERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIE 297

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 298 WGEDFGAPHETAIANHYDLPVF 319



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 31/194 (15%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE---- 433
            L +   E    +L+            D ++F            ++ G  +         
Sbjct: 256 KLELKMLERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHYD 315

Query: 434 -FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFE 490
              +I ++P                PF M       E++   DL++ + +         E
Sbjct: 316 LPVFITNYP------------TKIKPFYMQPNPENEETVLCADLIAPEGYG--------E 355

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R    E++ Q     G+     E  +       + G  PH G   G++R V  +
Sbjct: 356 IIGGSERVDDLELLEQRVKEHGLD----EEAYSYYLDLRRYGSVPHCGFGLGLERTVAWI 411

Query: 551 LGAKNVREVSLFPM 564
            G ++VRE + FP 
Sbjct: 412 SGVEHVRETAPFPR 425


>gi|120609891|ref|YP_969569.1| lysyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|120588355|gb|ABM31795.1| lysyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 518

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 62/306 (20%), Positives = 123/306 (40%), Gaps = 35/306 (11%)

Query: 7   HSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHY-----GITQVV 51
           H   DL      +           V ++G +   R  G   F  ++D       G  Q+ 
Sbjct: 51  HHAADLQAQYAETEAETLEANPVPVSVAGRMMLKRVMGKASFATVQDGSLGATHGRIQLY 110

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              D+   E   + +   +  I G      AE       TG++ +    + +L+ +   P
Sbjct: 111 VTRDAIGEEAYAAFKHWDLGDIVG------AEGTLMKTKTGELSVKVTNLRLLTKSLR-P 163

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           +P        + ++++ R++DL  D    +  + R++ ++ +R  M+   F+E  TP+L 
Sbjct: 164 MPDKFHGVADQEVKYRQRYVDLMTDEAARRRFIARSKAVSGIREFMVQHGFLEVETPMLH 223

Query: 171 A-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F+      +   Y L  AP+ Y + L+  GF+R F+I   FR+E   S R
Sbjct: 224 PIPGGANAKPFVTHHNALEQEMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVR 281

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYD 280
              EF  ++   ++    D+++  E ++R    + +    ++           F R+   
Sbjct: 282 HNPEFTMMEFYAAYWNYRDLMDFTEQLVRDAATKAAGSLQLTYQGRAVDLSQPFERLTIR 341

Query: 281 DAIRRY 286
           +AI R+
Sbjct: 342 EAILRH 347



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           ++E   E+K        F M      S   + ND       +++L   G E  +G    +
Sbjct: 388 YFEETVEDKLWQPT---FIMEHPTEISPLARANDTRPEVTERFELYITGREFGNGFSELN 444

Query: 500 MSEVMLQAFSNVGISKEVVEN---RFGG-LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            +E     F +   +K+  ++    F     RA + GMPP GG   GIDR++MLL  + +
Sbjct: 445 DAEDQAARFQSQVEAKDSGDDEAMYFDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSPS 504

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 505 IRDVILFP 512


>gi|116074402|ref|ZP_01471664.1| lysyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116069707|gb|EAU75459.1| lysyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 497

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 63/357 (17%), Positives = 125/357 (35%), Gaps = 28/357 (7%)

Query: 6   THSCGDLGVSDV----GSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           +H    L  +      G      V ++G V   R  G + F  + D  G  Q+       
Sbjct: 30  SHRMAALQEAHADLPNGEERDVPVAVAGRVMTRRVMGKLAFFTLADETGTIQLFLEKAGL 89

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             +     +    L   G  +  S      +   G++ +      +LS + + PLP    
Sbjct: 90  EAQQEGWFKQITSLVDSGDWLGVSGTLRRTD--RGELSVKVSDWRMLSKSLQ-PLPDKWH 146

Query: 118 REYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
                  R++ R+LDL       +   +R R+++ +R  +   +F+E  TP+L +     
Sbjct: 147 GLADVEKRYRQRYLDLVVSPDTRETFRRRARLVSGIRRWLDERDFLEIETPVLQSEPGGA 206

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F             L  A + + + L+  GF+R +++   FR+E   +   P EF 
Sbjct: 207 DARPFETHHNALDLPL-TLRIATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP-EFT 264

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            +++  ++ +   ++   E ++  V +E      ++     +      RR          
Sbjct: 265 SVEIYQAYSDYIGMMELTEQMVAAVCQEVCGSTKITYQGTEVDLTPPWRR---------- 314

Query: 296 PIIMHNVTEHFVHSEFRVFS--KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
              MH + E     +F  FS     +     +   +P       R   +   +   S
Sbjct: 315 -ATMHELVEDATGLDFNGFSSRDEAAAAMTAKGLHVPELADSVGRLLNEAFEQAVES 370



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 58/186 (31%), Gaps = 35/186 (18%)

Query: 392 DMQDGDSCFFIAGDPLKFCSFAADARN-HIAQELGIINCNCFE---------FCWIMDFP 441
           D    D   F + D       A       +A  +G +    FE           ++ D+P
Sbjct: 323 DATGLDFNGFSSRDEAAAAMTAKGLHVPELADSVGRLLNEAFEQAVESTLIQPTFVTDYP 382

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
                 E   +   H                        +++L   G E A+        
Sbjct: 383 V-----EISPLARPHR----------------SKPGLVERFELFIVGREHANAFSELIDP 421

Query: 502 EVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               Q        K       +        A + GMPP GG+  GIDR+VMLL  + ++R
Sbjct: 422 VDQRQRLEAQQARKAAGDLEAQGLDEDFVNALEVGMPPTGGLGIGIDRLVMLLTDSPSIR 481

Query: 558 EVSLFP 563
           +V  FP
Sbjct: 482 DVIAFP 487


>gi|314984274|gb|EFT28366.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
          Length = 1081

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 103/563 (18%), Positives = 180/563 (31%), Gaps = 120/563 (21%)

Query: 7    HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626  HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67   SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686  HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127  KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
            + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740  RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185  RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   Y L  AP+ Y + LM  G  R F+                             
Sbjct: 800  NAYDLDLY-LRIAPELYLKRLMVGGAGRVFE----------------------------- 829

Query: 245  EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                           +   F N    + +       +A + YG         + M ++T 
Sbjct: 830  ---------------IGRNFRNEGADATHNPEFTMLEAYQAYGDY-------VQMRHLTR 867

Query: 305  HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                    + S   +   G  V     KG        D  NE           +    ++
Sbjct: 868  EM------ILSAARNATGGTVVRGRDRKGVEH---EIDLANE-----------WHVITVN 907

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            E         +++ L    T        +   +                 +   H+++ +
Sbjct: 908  EG--------ISRGLGEEVTADTPKETLLGYANKLGIATLPKWSRGDVVLELHEHLSEHV 959

Query: 425  GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                    E  +  DFP               +P T        L         A ++DL
Sbjct: 960  ------TVEPTFFCDFP------------TDVSPLTRQHRDDPRL---------AEKWDL 992

Query: 485  VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +  G E+ +         +  + F+   +                  A +  MPP GG+ 
Sbjct: 993  IIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMG 1052

Query: 541  AGIDRIVMLLLGAKNVREVSLFP 563
             G+DR+VM+L  A ++RE   FP
Sbjct: 1053 MGLDRLVMMLTNA-SIRETISFP 1074


>gi|313811482|gb|EFS49196.1| lysyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313831223|gb|EFS68937.1| lysyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834245|gb|EFS71959.1| lysyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314974099|gb|EFT18195.1| lysyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976611|gb|EFT20706.1| lysyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|315095443|gb|EFT67419.1| lysyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|327328499|gb|EGE70261.1| lysine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327444286|gb|EGE90940.1| lysyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327444834|gb|EGE91488.1| lysyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|328759934|gb|EGF73518.1| lysine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 1081

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 103/563 (18%), Positives = 180/563 (31%), Gaps = 120/563 (21%)

Query: 7    HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626  HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67   SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686  HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127  KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
            + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740  RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185  RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   Y L  AP+ Y + LM  G  R F+                             
Sbjct: 800  NAYDLDLY-LRIAPELYLKRLMVGGAGRVFE----------------------------- 829

Query: 245  EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                           +   F N    + +       +A + YG         + M ++T 
Sbjct: 830  ---------------IGRNFRNEGADATHNPEFTMLEAYQAYGDY-------VQMRHLTR 867

Query: 305  HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                    + S   +   G  V     KG        D  NE           +    ++
Sbjct: 868  EM------ILSAARNATGGTVVRGRDRKGVEH---EIDLANE-----------WHVITVN 907

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            E         +++ L    T        +   +                 +   H+++ +
Sbjct: 908  EG--------ISRGLGEEVTADTPKETLLGYANKLGIATLPKWSRGDVVLELHEHLSEHV 959

Query: 425  GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                    E  +  DFP               +P T        L         A ++DL
Sbjct: 960  ------TVEPTFFCDFP------------TDVSPLTRQHRDDPRL---------AEKWDL 992

Query: 485  VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +  G E+ +         +  + F+   +                  A +  MPP GG+ 
Sbjct: 993  IIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMG 1052

Query: 541  AGIDRIVMLLLGAKNVREVSLFP 563
             G+DR+VM+L  A ++RE   FP
Sbjct: 1053 MGLDRLVMMLTNA-SIRETISFP 1074


>gi|313773647|gb|EFS39613.1| lysyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
          Length = 1081

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 103/563 (18%), Positives = 180/563 (31%), Gaps = 120/563 (21%)

Query: 7    HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626  HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67   SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686  HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127  KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
            + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740  RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185  RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   Y L  AP+ Y + LM  G  R F+                             
Sbjct: 800  NAYDLDLY-LRIAPELYLKRLMVGGAGRVFE----------------------------- 829

Query: 245  EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                           +   F N    + +       +A + YG         + M ++T 
Sbjct: 830  ---------------IGRNFRNEGADATHNPEFTMLEAYQAYGDY-------VQMRHLTR 867

Query: 305  HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                    + S   +   G  V     KG        D  NE           +    ++
Sbjct: 868  EM------ILSAARNATGGTVVRGRDRKGVEH---EIDLANE-----------WHVITVN 907

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            E         +++ L    T        +   +                 +   H+++ +
Sbjct: 908  EG--------ISRGLGEEVTADTPKETLLGYANKLGIATLPKWSRGDVVLELHEHLSEHV 959

Query: 425  GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                    E  +  DFP               +P T        L         A ++DL
Sbjct: 960  ------TVEPTFFCDFP------------TDVSPLTRQHRDDPRL---------AEKWDL 992

Query: 485  VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +  G E+ +         +  + F+   +                  A +  MPP GG+ 
Sbjct: 993  IIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMG 1052

Query: 541  AGIDRIVMLLLGAKNVREVSLFP 563
             G+DR+VM+L  A ++RE   FP
Sbjct: 1053 MGLDRLVMMLTNA-SIRETISFP 1074


>gi|56420706|ref|YP_148024.1| asparaginyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|56380548|dbj|BAD76456.1| asparaginyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 431

 Score =  198 bits (503), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 74/297 (24%), Positives = 121/297 (40%), Gaps = 32/297 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           +T +  ++    VG  V +  W+   R  G I+FL +RD  G  Q V    N     F+ 
Sbjct: 2   KTTTIAEVN-QYVGQQVTIGAWLANKRSSGKIVFLQLRDGTGFIQGVVEKANVSEEVFQR 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK++  E  L + G V                 ELS   ++++  A + P+     +E+ 
Sbjct: 61  AKTLTQETSLYVTGTVRIDERSPF-------GYELSVADLQVIQEAVDYPITP---KEHG 110

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +R L LR    H  +  R  II +         F++   PILT S+PEG  +  
Sbjct: 111 VEFLMDHRHLWLRSRRQHAIMKIRNEIIRATYEFFNDRGFVKVDAPILTGSAPEGTTELF 170

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                ++ ++  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 171 HTKYFDEDAY--LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMVEPEM 227

Query: 242 SFVEQDDILNTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283
           +F E +D L   E  +  + +               + S    V   F R+ YD+AI
Sbjct: 228 AFYEFEDNLRLQEEYVSYLVQSVLERCRLELGRLGRDVSKLELVKPPFPRLTYDEAI 284



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 50/166 (30%), Gaps = 21/166 (12%)

Query: 401 FIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
               + +K              + G  +       +  D P +           +  PF 
Sbjct: 278 LTYDEAIKLLHEKGLTDIEWGDDFGAPHETAIAESF--DKPVF-----ITHYPTSLKPFY 330

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           M          N    +     DL+      EI  G  R H  E++ +      +  E  
Sbjct: 331 MQPD------PNRPDVVLCA--DLIAPEGYGEIIGGSERIHDYELLKRRLEEHHLPLEAY 382

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           E          + G  PH G   G++R V  + G ++VRE   FP 
Sbjct: 383 E----WYLDLRKYGSVPHSGFGLGLERTVAWICGVEHVRETIPFPR 424


>gi|15924444|ref|NP_371978.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927035|ref|NP_374568.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|148267940|ref|YP_001246883.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|150394003|ref|YP_001316678.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JH1]
 gi|156979773|ref|YP_001442032.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253315963|ref|ZP_04839176.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|255006241|ref|ZP_05144842.2| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257795490|ref|ZP_05644469.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258413299|ref|ZP_05681575.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420594|ref|ZP_05683536.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258426790|ref|ZP_05688010.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258444788|ref|ZP_05693117.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258447378|ref|ZP_05695522.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258449737|ref|ZP_05697838.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258454594|ref|ZP_05702558.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|269203079|ref|YP_003282348.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282892950|ref|ZP_06301185.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282927981|ref|ZP_06335590.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|295407204|ref|ZP_06817004.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296275348|ref|ZP_06857855.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297244628|ref|ZP_06928511.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|54039683|sp|P67572|SYN_STAAN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|54042044|sp|P67571|SYN_STAAM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166232738|sp|A7X2E9|SYN_STAA1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|189083482|sp|A6U1S3|SYN_STAA2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|189083483|sp|A5ISY4|SYN_STAA9 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|13701252|dbj|BAB42547.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247225|dbj|BAB57616.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|147741009|gb|ABQ49307.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149946455|gb|ABR52391.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JH1]
 gi|156721908|dbj|BAF78325.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|257789462|gb|EEV27802.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839863|gb|EEV64331.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843542|gb|EEV67949.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257849951|gb|EEV73909.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257850281|gb|EEV74234.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257853569|gb|EEV76528.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257856985|gb|EEV79885.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257862977|gb|EEV85741.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262075369|gb|ACY11342.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282590278|gb|EFB95358.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282764947|gb|EFC05072.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285817134|gb|ADC37621.1| Asparaginyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294967917|gb|EFG43946.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297178658|gb|EFH37904.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|312829846|emb|CBX34688.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315129169|gb|EFT85164.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|329727061|gb|EGG63517.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 430

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 77/322 (23%), Positives = 123/322 (38%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 9   KDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLAKEIAQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++S A + P+     + +       +R 
Sbjct: 69  LYVTGTITEDNRSDL-------GYEMQVKSIEVISEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +
Sbjct: 119 LWLRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 179 F--LSQSGQLYLEAA-AMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESL 235

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDAI      G D  +
Sbjct: 236 EIQEQYVTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 296 WGEDFGAPHETAIANHYDLPVF 317



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 31/194 (15%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE---- 433
            L +   E    +L+            D ++F            ++ G  +         
Sbjct: 254 KLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHYD 313

Query: 434 -FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFE 490
              +I ++P                PF M       E++   DL++ + +         E
Sbjct: 314 LPVFITNYP------------TKIKPFYMQPNPENEETVLCADLIAPEGYG--------E 353

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R    E++ Q     G+     E  +       + G  PH G   G++R V  +
Sbjct: 354 IIGGSERVDDLELLEQRVKEHGLD----EEAYSYYLDLRRYGSVPHCGFGLGLERTVAWI 409

Query: 551 LGAKNVREVSLFPM 564
            G ++VRE + FP 
Sbjct: 410 SGVEHVRETAPFPR 423


>gi|91784240|ref|YP_559446.1| lysyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|122970323|sp|Q13WZ5|SYK_BURXL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|91688194|gb|ABE31394.1| Lysyl-tRNA synthetase, class-2 [Burkholderia xenovorans LB400]
          Length = 513

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 67/306 (21%), Positives = 120/306 (39%), Gaps = 30/306 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL      S           V ++G +   R  G   F  +RD  G  Q    P 
Sbjct: 48  THHAEDLQAQYEHSDKEALEANPLEVAIAGRMMLKRVMGKASFATVRDGSGQIQFFITPA 107

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +LS +   PLP  
Sbjct: 108 DVGQETYDAFKKWDMGDI------VAARGVLFRTNKGELSVRCTELRLLSKSLR-PLPDK 160

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + ++++ R++DL       K  V RT+ I+S+R  M   +F+E  TP+L     
Sbjct: 161 FHGLSDQEMKYRQRYVDLIVTPETRKTFVARTKAISSIRKFMADADFMEVETPMLHPIPG 220

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F           + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 221 GAAAKPFTTHHNALDMQMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SVRHNPE 278

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T++           F R+    AI+
Sbjct: 279 FTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTATITYQGRELDLAKPFHRLTITQAIQ 338

Query: 285 RYGTDK 290
           +Y    
Sbjct: 339 KYAPQY 344



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +  +      +    + + +D +     +++L   G EIA+G    +  
Sbjct: 383 LFEETAESQLWEPTYIIDYPIEVSPLA-RASDKVEGITERFELFITGREIANGFSELNDP 441

Query: 502 EVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      K+  +           RA + GMPP GG   GIDR+VMLL  + ++R
Sbjct: 442 EDQAARFRKQVDQKDAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLVMLLTDSPSIR 501

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 502 DVILFP 507


>gi|154149654|ref|YP_001403272.1| aspartyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|153998206|gb|ABS54629.1| aspartyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 430

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 84/307 (27%), Positives = 138/307 (44%), Gaps = 27/307 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCIDGLVMS 79
           + GWVH  R  GG+ F  IRD  GI QV         E+   AK V  E V+ I G V +
Sbjct: 17  ICGWVHEERDLGGLAFFLIRDRTGIIQVTIPKKKVSEEVLLAAKKVSRESVVRIAGTVKA 76

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPESIRFKYRFLDLRRDTL 138
                       G  E+   K EI+++AE        E+       R   RFLD+RR  +
Sbjct: 77  VEK-------APGGREIVPDKFEIINLAETPLPLDVSEKVGVELDTRLDARFLDVRRPRV 129

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                 R+  + ++   +  E FI  +TP + A++ EG  +    +  ++ +F  L Q+P
Sbjct: 130 AAVFQIRSAALFAVNEFLHKEGFISITTPKIVAAATEGGTELFPIAYFDKEAF--LNQSP 187

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           Q YKQ++MA GF++ ++I P FR E+  + +   E   +D+E+SF +  D++ T+E+++ 
Sbjct: 188 QLYKQMMMAGGFEKVYEIGPIFRAEEHNTTKHLNEATSIDIEVSFADHHDVMKTLEHLIV 247

Query: 259 GVFE-------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPD-LRNPIIMHNVTE 304
             +E             E  N       F R+ Y +AI        + ++    +    E
Sbjct: 248 TTYEYVNKTCSTQIANLEIDNFAVPKAPFTRLPYGEAIGIAQKKSGEPIKYGDDISAAAE 307

Query: 305 HFVHSEF 311
           H +  E 
Sbjct: 308 HAIGDEM 314



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 96/261 (36%), Gaps = 38/261 (14%)

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG-QPGLAYIFWRLDESGNVAGM 372
           F K+  + P +                 D    +A        L ++     E  N    
Sbjct: 199 FEKVYEIGPIFRAEEHNTTKHLNEATSIDIEVSFADHHDVMKTLEHLIVTTYEYVNKTCS 258

Query: 373 GPVAKHLNIVNTEAIRVR-LDMQDGDSCFFIA---GDPLKFCS-FAADARNHIAQELGII 427
             +A +L I N    +     +  G++        G+P+K+    +A A + I  E+G  
Sbjct: 259 TQIA-NLEIDNFAVPKAPFTRLPYGEAIGIAQKKSGEPIKYGDDISAAAEHAIGDEMG-- 315

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                   +I+D+P                P+             D    KA  +DL+  
Sbjct: 316 -----AHYFIVDWP------------TEIRPYYAMPYED------DPSICKA--FDLMHP 350

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             E++SG  R H  ++++Q     G++       F    R F+ GMPPH G   G +R++
Sbjct: 351 RMELSSGAQRVHQYDLLVQQIKKKGLNP----ESFEFYLRPFRYGMPPHAGWGLGAERLI 406

Query: 548 MLLLGAKNVREVSLFPMSQNF 568
           M +LG  NVRE  LFP   + 
Sbjct: 407 MTMLGLSNVREAVLFPRDMHR 427


>gi|158338556|ref|YP_001519733.1| lysyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158308797|gb|ABW30414.1| lysyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 517

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 64/345 (18%), Positives = 133/345 (38%), Gaps = 33/345 (9%)

Query: 2   HRYR---THSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           + YR   TH+   L           +    V ++G +   R  G + F +++D  G  Q+
Sbjct: 38  YAYRWQSTHTAQALQEKFVDLANGEEEDFEVAIAGRILARRVFGKLAFFNLQDETGTIQL 97

Query: 51  VANP----DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV 106
                   +    +  ++      L   G  +         +   G++ +  Q   +L+ 
Sbjct: 98  YLEKKRIQEQMGEQDEQAFNHLKQLTDVGDFIGVQGTIKRTD--KGELSVYVQTYTVLTK 155

Query: 107 AEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECS 165
           +  LPLP         + R++ R++DL  +  + +   +R +I  S+R  +  + FIE  
Sbjct: 156 SL-LPLPDKWHGLTDIAKRYRQRYVDLIVNPSVRETFRRRAQITASIRRYLDEQGFIEIE 214

Query: 166 TPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
           TP+L + +    AR F+      +   Y L  A + + + L+  GF++ F++   FR+E 
Sbjct: 215 TPVLNSEAGGAEARPFITYHNTMEMDLY-LRIATELHLKRLIVGGFEKVFELGRVFRNEG 273

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
             +   P EF  +++  ++ + +D+++  E ++    E       V      I      R
Sbjct: 274 ISTRHNP-EFTTIEVYQAYADYNDMMDLTEALICTAAERSVGSLKVPYQGETIDLTSPWR 332

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
           R           + MH+  +     +F  F  + +         I
Sbjct: 333 R-----------VTMHDAVQEKTGLDFTTFETVEAAQKAATKAGI 366



 Score = 85.1 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 4/92 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQC 531
           S    +++L   G E A+            Q        KE               A + 
Sbjct: 415 SGLVERFELFIVGRETANSFSELTDPVDQRQRLEAQAARKEAGDLEAHGVDEDFITALEY 474

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP GG+  GIDR+ MLL  A ++R+V  FP
Sbjct: 475 GMPPTGGLGIGIDRLAMLLSDAASIRDVIAFP 506


>gi|33592239|ref|NP_879883.1| lysyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|39932123|sp|Q7VZ37|SYK_BORPE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33571884|emb|CAE41400.1| lysyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332381656|gb|AEE66503.1| lysyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 506

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 63/312 (20%), Positives = 128/312 (41%), Gaps = 23/312 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+++G +   R  G   F  ++D  G  Q+     +   E   + +   +    G +++
Sbjct: 65  TVKVAGRMMLKRVMGKASFATLQDGSGRIQIYLERGTLGEEAYAAFKQWDI----GDIIA 120

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTL 138
                   N   G++ + A    +LS +   PLP        + +R++ R++DL   D  
Sbjct: 121 IEGPVFKTN--KGELSVHANSARLLSKSLR-PLPDKFHGVADQELRYRQRYVDLIMTDAT 177

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            +    R++ +  +R  M+   F+E  TP+L        A+ F+          + L  A
Sbjct: 178 RRTFEARSKAVGGIRQAMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMF-LRIA 236

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E+++
Sbjct: 237 PELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYADYRWLMDFTEDLI 295

Query: 258 R---------GVFEEFSNGNTVSNNFLRICYDDAIRRY--GTDKPDLRNP-IIMHNVTEH 305
           R          V         +S  F R+   +AI +Y  G  +  L +P  +   + + 
Sbjct: 296 RQAAIAATGSAVLSYQDRELDLSQPFDRLTICEAILKYAEGYTQAQLDDPAFVRAELRKL 355

Query: 306 FVHSEFRVFSKI 317
             + E    ++ 
Sbjct: 356 GANVEGPPLARA 367



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 61/162 (37%), Gaps = 27/162 (16%)

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
           P    +     +  + +E        +   +I+D+P                        
Sbjct: 362 PPLARAGLGALQLALFEE--TAEAKLWRPTYIIDYP---------------------VEV 398

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF--- 522
               + +D       +++L   G EIA+G    +  E   + F     +K+  +      
Sbjct: 399 SPLARASDTRDGITERFELFITGREIANGFSELNDPEDQAERFRAQVEAKDAGDEEAMYF 458

Query: 523 -GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                RA + GMPP GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 459 DADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVILFP 500


>gi|296158327|ref|ZP_06841158.1| lysyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295891271|gb|EFG71058.1| lysyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 527

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 68/306 (22%), Positives = 120/306 (39%), Gaps = 30/306 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL      S           V ++G +   R  G   F  +RD  G  Q    P 
Sbjct: 62  THHAEDLQAQYEHSDKEALEANPLEVAIAGRMMLKRVMGKASFATVRDGSGQIQFFITPA 121

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +LS +   PLP  
Sbjct: 122 DVGQETYDAFKKWDMGDI------VAARGVLFRTNKGELSVRCTELRLLSKSLR-PLPDK 174

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + ++++ R++DL       K  V RTR I+S+R  M   +F+E  TP+L     
Sbjct: 175 FHGLSDQEMKYRQRYVDLIVTPETRKTFVARTRAISSIRKFMADADFMEVETPMLHPIPG 234

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F           + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 235 GAAAKPFTTHHNALDMQMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SVRHNPE 292

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T++           F R+    AI+
Sbjct: 293 FTMIEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATITYQGRELDLAKPFHRLTITQAIQ 352

Query: 285 RYGTDK 290
           +Y    
Sbjct: 353 KYAPQY 358



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +  +      +    + + +D +     +++L   G EIA+G    +  
Sbjct: 397 LFEETAESQLWEPTYIIDYPIEVSPLA-RASDKVDGITERFELFITGREIANGFSELNDP 455

Query: 502 EVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      K+  +           RA + GMPP GG   GIDR+VMLL  + ++R
Sbjct: 456 EDQAARFRKQVDQKDAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLVMLLTDSPSIR 515

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 516 DVILFP 521


>gi|94968314|ref|YP_590362.1| lysyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|94550364|gb|ABF40288.1| lysyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 508

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 63/300 (21%), Positives = 123/300 (41%), Gaps = 21/300 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            ++ + +  +L    +   VR++G +  +R  G   F  ++ +    Q+    D+   + 
Sbjct: 41  EQFESKTGEELEAHHID--VRVAGRLMSIRGQGKAGFAHLQQNGKKLQLYVRLDNVGEKG 98

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
               +   +    G      A+       TG++ +  ++I  L+  + LPLP        
Sbjct: 99  FALYKLLDLGDFIG------AKGYLFRTRTGELSIHVEEITFLAK-DLLPLPEKWHGLTD 151

Query: 122 ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARD 179
             +R++ R++D+  D  + +  +KR RI+ +MR       F+E  TP+L        AR 
Sbjct: 152 VELRYRRRYVDMNMDPDVREVFIKRARILQTMRSFFDQRGFVEVETPMLQSQYGGAAARP 211

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           Y L  AP+ Y + L+  G DR ++I   FR+E   +   P EF  L+ 
Sbjct: 212 FTTHHNTLDMDLY-LRIAPELYLKRLVVGGIDRVYEINRNFRNEGISTRHNP-EFTMLEF 269

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS--------NGNTVSNNFLRICYDDAIRRYGTDKP 291
             ++ +  D++   E + R +  E +        +     +   R+   DAI +Y  +  
Sbjct: 270 YWAYADYFDLMTLTEELFRQLATEVTGGTTVQYGDHTLDFSKMERLTMRDAILKYWPENA 329



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 6/96 (6%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS----NVGISKEVVENRFGGLYR 527
            D   +   ++++ C G EI +     +      + F           E          R
Sbjct: 403 EDPEWV--ERFEVFCAGMEIGNAFSELNDPIEQRKRFEMQLAERARGDEEAHQMDEDYVR 460

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP GG+  GIDR VMLL  +K++R+V LFP
Sbjct: 461 ALSYGMPPTGGMGIGIDRTVMLLTNSKSIRDVILFP 496


>gi|154491796|ref|ZP_02031422.1| hypothetical protein PARMER_01413 [Parabacteroides merdae ATCC
           43184]
 gi|154088037|gb|EDN87082.1| hypothetical protein PARMER_01413 [Parabacteroides merdae ATCC
           43184]
          Length = 468

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 58/291 (19%), Positives = 107/291 (36%), Gaps = 27/291 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61
            RT     L     G+ V + GWV   R    + F+ + D   I  V    + D    E 
Sbjct: 5   KRTKIVDVLKSEAFGTTVNVKGWVRTRRGSKQVSFIALNDGSTINNVQIVVDVDKLGEEF 64

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K + +   + ++G ++    +  N       +E+ A +IEI   A+    P+  +    
Sbjct: 65  LKPITTGASISVNGTLVQSQGKGQN-------VEIQATEIEIYGSADPNTYPLQKKGHSM 117

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +   L  R +T       R  +  ++        F    TP++TAS  EGA    
Sbjct: 118 EFLR-EIAHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPLITASDCEGAGQMF 176

Query: 182 VPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDED 224
             + +N                 F+    +     Q +  L A+   + +   P FR E+
Sbjct: 177 QVTTMNLYDLKKDENGSIVYDNDFFGKQASLTVSGQLEGELAATALGQIYTFGPTFRAEN 236

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
             + R   EF+ ++ E++F +  D +   E  ++   +   +       FL
Sbjct: 237 SNTPRHLAEFWMIEPEVAFNDILDNMQLAEEFIKYCVQWALDNCMDDIKFL 287



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 24/149 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P     +E K        F M Q         D  +++A  
Sbjct: 343 HERFLVEEHFKRPVILTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 383

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R    + +L   + +GI  + +           + G  PH G   
Sbjct: 384 V-LFPKIGEIIGGSEREADYDKLLNRINEMGIPMKDMW----WYLDTRRFGTVPHSGFGL 438

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G +R+++ + G  N+R+V  FP +    D
Sbjct: 439 GFERLLLFVTGMTNIRDVIPFPRTPKNAD 467


>gi|322369960|ref|ZP_08044522.1| aspartyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320550296|gb|EFW91948.1| aspartyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 432

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 79/347 (22%), Positives = 146/347 (42%), Gaps = 41/347 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++      ++ G  V ++GWVH +R  GGI FL +RD  G  QV    D    E+ ++
Sbjct: 4   RTYTAD----AEPGETVTVAGWVHEIRDLGGIAFLIVRDTTGKIQVKFEKDDMDEELVET 59

Query: 65  ---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-PVFGEREY 120
              V  E V+ I G V                +E+    + +++ AE        G+ + 
Sbjct: 60  GLGVNRESVVEITGDVKEEPR-------APTDVEIVPTDVAVIAEAEPELPLDPSGKVDA 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
             S R   R LD R++ +      R  ++ ++R         E +TP + A+  EG  + 
Sbjct: 113 DLSTRLDNRTLDARKEDVEAVFKIRGEVLRAVRETFRDLGCSEINTPKIVATGTEGGTEL 172

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F    Q+PQ +KQL++ SG +R F+I P FR E+  + R   E   +D E
Sbjct: 173 FPITYFGEEAFMN--QSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFE 230

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDA------ 282
            +F + ++ ++  E V++  +E  +            +      +F R+ Y++A      
Sbjct: 231 SAFYDHNEAMDACEAVVKAAYEGVAENCQDELDALDIDFEVPEGDFPRLTYEEAIERINA 290

Query: 283 ------IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
                 +  +G D P      +  +V  H+  +++    K   +   
Sbjct: 291 TGELDEMLVWGDDLPTEGEKALGEDVGTHYFITDWPSEIKPFYIKDH 337



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 76/198 (38%), Gaps = 31/198 (15%)

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI--AQEL-----GIINCNCFE 433
               +A+ +  ++ +GD       + ++  +   +    +    +L       +  +   
Sbjct: 259 QDELDALDIDFEVPEGDFPRLTYEEAIERINATGELDEMLVWGDDLPTEGEKALGEDVGT 318

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             +I D+P                PF         +K +D     +  +D++    E+ S
Sbjct: 319 HYFITDWP------------SEIKPFY--------IKDHDDDEELSTGFDMMHPRMELVS 358

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           GG R H  + +++ F   G+        F    + F+ GMPPH G   G +R++M +LG 
Sbjct: 359 GGQREHRYDRLVEGFEQQGLDP----EAFDYYTKMFKYGMPPHAGWGLGGERLIMTMLGL 414

Query: 554 KNVREVSLFPMSQNFCDL 571
            N+RE  LFP  +     
Sbjct: 415 DNIREAVLFPRDRQRLSP 432


>gi|293399907|ref|ZP_06644053.1| lysine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306307|gb|EFE47550.1| lysine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 493

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 69/339 (20%), Positives = 124/339 (36%), Gaps = 28/339 (8%)

Query: 5   RTHSCGDLGVSDVG----------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH  G +     G            V+++G +   R  G   F+ I+D  G  Q+    
Sbjct: 32  RTHKSGQIRAEYEGCTKEELEEKNVTVKVAGRIMTKRRQGKAGFMHIQDVDGQIQIYVRK 91

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +  I G+      E        G++ + A+    L+ A   PLP 
Sbjct: 92  DVIGEEAYEVFKKSDLGDIVGI------EGKVMKTNHGELSVKAEVYTHLTKALR-PLPE 144

Query: 115 FGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTAS- 172
                  +  RF+ R++DL  +    +  V R RII +++  +  +  +E  TP+L    
Sbjct: 145 KFHGLQDKEERFRRRYVDLIMNEESKRIAVTRPRIIRAIQRYLDGKGLMEVETPVLQPIL 204

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+         FY L  A +   + L+  G +  ++I   FR+E   +   P 
Sbjct: 205 GGAAARPFITHHNTLDMPFY-LRIATELPLKRLIVGGLEGVYEIGRLFRNEGMDATHNP- 262

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP- 291
           EF  ++  +++ + + +++ +E +   V  E      ++ N   I      +R       
Sbjct: 263 EFTTVEAYVAYSDLNGMMDLIEGLFDYVANEVLGTTEITYNEKAISLKAPFKRLHMVDAI 322

Query: 292 ------DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
                 D    +      E     E  V  K  SV    
Sbjct: 323 KEACGVDFWKEMSFEEACEIAKEHEIEVEKKHNSVGHII 361



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 11/133 (8%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   EE  I   +   +P ++    +      D     A +Y+L  +G E A+     
Sbjct: 364 FFEKYVEETLIQPTYIYGHPTSISP--LAKKNAQDPR--FADRYELFIDGHEYANAFSEL 419

Query: 499 HMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      + F N    +++ ++           A + G+PP GG+  GIDR VMLL G  
Sbjct: 420 NDPIDQRERFENQLKLRDLGDDEANEMDTDYVEALEYGLPPTGGVGLGIDRFVMLLTGQT 479

Query: 555 NVREVSLFPMSQN 567
            +REV LFP  +N
Sbjct: 480 TIREVLLFPHMKN 492


>gi|33601276|ref|NP_888836.1| lysyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|39932139|sp|Q7WK46|SYK_BORBR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33575711|emb|CAE32789.1| lysyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 506

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 63/312 (20%), Positives = 128/312 (41%), Gaps = 23/312 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+++G +   R  G   F  ++D  G  Q+     +   E   + +   +    G +++
Sbjct: 65  TVKVAGRMMLKRVMGKASFATLQDGSGRIQIYLERGTLGEEAYAAFKQWDI----GDIIA 120

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTL 138
                   N   G++ + A    +LS +   PLP        + +R++ R++DL   D  
Sbjct: 121 IEGPVFKTN--KGELSVHANSARLLSKSLR-PLPDKFHGVADQELRYRQRYVDLIMTDAT 177

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            +    R++ +  +R  M+   F+E  TP+L        A+ F+          + L  A
Sbjct: 178 RRTFEARSKAVGGIRQTMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMF-LRIA 236

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E+++
Sbjct: 237 PELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYADYRWLMDFTEDLI 295

Query: 258 R---------GVFEEFSNGNTVSNNFLRICYDDAIRRY--GTDKPDLRNP-IIMHNVTEH 305
           R          V         +S  F R+   +AI +Y  G  +  L +P  +   + + 
Sbjct: 296 RQAAIAATGSAVLSYQDRELDLSQPFDRLTICEAILKYAEGYTQAQLDDPAFVRAELRKL 355

Query: 306 FVHSEFRVFSKI 317
             + E    ++ 
Sbjct: 356 GANVEGPPLARA 367



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 61/162 (37%), Gaps = 27/162 (16%)

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
           P    +     +  + +E        +   +I+D+P                        
Sbjct: 362 PPLARAGLGALQLALFEE--TAEAKLWRPTYIIDYP---------------------VEV 398

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF--- 522
               + +D       +++L   G EIA+G    +  E   + F     +K+  +      
Sbjct: 399 SPLARASDTRDGITERFELFITGREIANGFSELNDPEDQAERFRAQVEAKDAGDEEAMYF 458

Query: 523 -GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                RA + GMPP GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 459 DADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVILFP 500


>gi|220903895|ref|YP_002479207.1| lysyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868194|gb|ACL48529.1| lysyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 503

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 53/287 (18%), Positives = 113/287 (39%), Gaps = 19/287 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +  +R  G ++F  I D  G  Q  A  +         V+   +  I G+    
Sbjct: 67  VAIAGRIVSLRSFGKVVFFHIMDQTGRVQCYAAREHLDDATHSLVKKLDIGDIVGV---- 122

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLH 139
                     TG++ ++ + I++++ +   PLP           R++ R++DL       
Sbjct: 123 --SGHLFRTKTGELTIACRTIKLITRS-MRPLPEKYHGLKDMETRYRQRYVDLIVTPRAR 179

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           +   KR++I+   R  M    F+E  TP++   +   A                +  AP+
Sbjct: 180 EIFFKRSQIVREFRHFMEDHGFMEVETPMMQPLAGGAAAKPFKTHHNALDMGLYMRIAPE 239

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF++ F++   FR+E   +   P EF   +   ++   +D+++  E +   
Sbjct: 240 LYLKRLLVGGFEKVFELNRNFRNEGIDTRHNP-EFTMCEFYWAYATFEDLMDLTEKLFAH 298

Query: 260 VFEEFSN----------GNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           + +               +     + R+ + D++   G  +P+  N 
Sbjct: 299 LAQTVCGTTVVPYQGEMIDLTPGKWTRMSFYDSLTVIGGHQPEFYND 345



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            ++ + E  K+   H  +  P       + ND       +++L   G EI++     +  
Sbjct: 373 LFDLDVE-GKLVQPHFIYHYPTEISPLSRRNDNDPALTDRFELFITGREISNAFSELNDP 431

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F +    KE  ++          RA + GMPP  G   GIDR+VMLL  + ++R
Sbjct: 432 VDQRLRFEDQVREKEAGDDEAHSMDEDYLRALEYGMPPAAGQGVGIDRLVMLLTDSASIR 491

Query: 558 EVSLFP 563
           EV LFP
Sbjct: 492 EVILFP 497


>gi|187924548|ref|YP_001896190.1| lysyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|238689470|sp|B2SXV7|SYK_BURPP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|187715742|gb|ACD16966.1| lysyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 518

 Score =  197 bits (502), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 67/306 (21%), Positives = 120/306 (39%), Gaps = 30/306 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL      S           V ++G +   R  G   F  +RD  G  Q    P 
Sbjct: 53  THHAEDLQSQYEQSDKEALEANPLEVAIAGRMMLKRVMGKASFATVRDGSGQIQFFITPT 112

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +LS +   PLP  
Sbjct: 113 DVGQETYDAFKKWDMGDI------VAARGVLFRTNKGELSVRCTELRLLSKSLR-PLPDK 165

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + ++++ R++DL       K  V RT+ I+S+R  M   +F+E  TP+L     
Sbjct: 166 FHGLADQEMKYRQRYVDLIVTPETRKTFVARTKAISSIRKFMAEADFMEVETPMLHPIPG 225

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F           + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 226 GAAAKPFTTHHNALDMQMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SVRHNPE 283

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T++           F R+    AI+
Sbjct: 284 FTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTATITYQGRELDLAKPFHRLTITQAIQ 343

Query: 285 RYGTDK 290
           +Y    
Sbjct: 344 KYAPQY 349



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +  +      +    + + +D ++    +++L   G EIA+G    +  
Sbjct: 388 LFEETAESQLWEPTYIIDYPIEVSPLA-RASDKVAGITERFELFITGREIANGFSELNDP 446

Query: 502 EVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      KE  +           RA + GMPP GG   GIDR+VM+L  + ++R
Sbjct: 447 EDQAARFKKQVDQKEAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLVMMLTDSPSIR 506

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 507 DVILFP 512


>gi|260886922|ref|ZP_05898185.1| lysine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260863351|gb|EEX77851.1| lysine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 308

 Score =  197 bits (502), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 59/272 (21%), Positives = 111/272 (40%), Gaps = 20/272 (7%)

Query: 2   HRYR-THSCGDL--------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           HRY  T    +L          ++  + V ++G +  +R HG   F  + D  G  Q+  
Sbjct: 39  HRYEVTRHADELLAEFASLGEEAESETEVSIAGRLMAIRGHGKASFAVLMDLSGKIQIYF 98

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
             D    E  K  +   +  I G+        +      G++ +      +LS +   PL
Sbjct: 99  KLDVLGEEKYKEFKLLDIGDIIGV------RGVVFRTRRGELTVRVDDFTLLSKSLR-PL 151

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-T 170
           P          +R++ R++DL  +   K+    RT+II S+R  +    F+E  TP++ T
Sbjct: 152 PEKFHGLKDVEMRYRQRYVDLIMNPEVKDTFIARTKIIQSIRRYLDERGFLEVETPVMST 211

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +    AR F+          Y L  A +   + L+  G +R ++I   FR+E       
Sbjct: 212 IAGGAAARPFVTYHNALDMKLY-LRIATELNLKRLIVGGLERVYEIGRIFRNEGIDVRHN 270

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           P EF  +++  ++ + +D+++  E +      
Sbjct: 271 P-EFTSIEIYQAYADYNDLMDVTEGICCQAAR 301


>gi|209519986|ref|ZP_03268765.1| lysyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209499583|gb|EDZ99659.1| lysyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 518

 Score =  197 bits (502), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 65/306 (21%), Positives = 119/306 (38%), Gaps = 30/306 (9%)

Query: 6   THSCGDLGV--SDVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL                  V ++G +   R  G   F  +RD  G  Q    P 
Sbjct: 53  THHAEDLQAQYEHTDKEALEANPLEVAIAGRMMLKRVMGKASFATVRDGSGQIQFFITPA 112

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +LS +   PLP  
Sbjct: 113 DVGQETYDAFKKWDMGDI------VAARGVLFRTNKGELSVRCTELRLLSKSLR-PLPDK 165

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + ++++ R++DL       +  + RT+ I+S+R  M   NF+E  TP+L     
Sbjct: 166 FHGLADQEMKYRQRYVDLIVTPETRRTFLARTKAISSIRKYMADANFMEVETPMLHPIPG 225

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F           + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 226 GAAAKPFSTHHNALDMQMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SVRHNPE 283

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T++           F R+    AI+
Sbjct: 284 FTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTATITYQGRELDLSKPFHRLTITQAIQ 343

Query: 285 RYGTDK 290
           +Y    
Sbjct: 344 KYAPQY 349



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +  +      +    + + +D +     +++L   G EIA+G    +  
Sbjct: 388 LFEETAESQLWEPTYIIDYPIEVSPLA-RASDKVDGITERFELFITGREIANGFSELNDP 446

Query: 502 EVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      K+  +           RA + GMPP GG   GIDR+VM+L  + ++R
Sbjct: 447 EDQAARFKKQVDQKDAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLVMMLTDSPSIR 506

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 507 DVILFP 512


>gi|170780565|ref|YP_001708897.1| lysyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169155133|emb|CAQ00233.1| lysyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 513

 Score =  197 bits (502), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 106/556 (19%), Positives = 184/556 (33%), Gaps = 127/556 (22%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            +    V ++G V   R  G + F  ++   G          +  E+     + W   +D
Sbjct: 75  EETDHVVGIAGRVVHFRNTGKLCFATLQAGDGT---RIQAMISLAEVGDEALAAWKELVD 131

Query: 75  -GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +      I +    G++ + A +  I S A           E  +  R + R+LDL
Sbjct: 132 LGDHVFVGGRVIASR--KGELSIMASEWRIASKAL--LPLPNLHSELSDETRVRSRYLDL 187

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             RD   KN++ R ++  SMR       ++E  TP+L        AR F+  S       
Sbjct: 188 IVRDQARKNVLDRAKVNASMRETFRQRGYVEVETPMLQVMHGGASARPFVTHSNAFDTEM 247

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y +  +  G DR F+I   FR+E   S   P EF  L+             
Sbjct: 248 Y-LRIAPELYLKRAVVGGIDRVFEINRNFRNEGADSTHSP-EFAMLEAY----------- 294

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
                     E + +  +++     +  D A+   G+        +   + T++ +  E+
Sbjct: 295 ----------EAYGDYTSIAELTQTLVQDAAMAVAGSHV------VTWADGTDYDLGGEW 338

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
              S   S++    +   PA          D +   A  +G               +++ 
Sbjct: 339 DRISMYASLSEAAGIEITPA-------TSVDELQAIADREGV------------DVHLST 379

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
            G + + L     +    R                                         
Sbjct: 380 HGKLVEELWEHFVKGSLER----------------------------------------- 398

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
               +++DFP               +P T     +E             ++DL   GFE+
Sbjct: 399 --PTFVLDFP------------VETSPLTRAHRSIE---------GVVEKWDLYIRGFEL 435

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIV 547
           A+G        V  + F +        ++          RA + GMPP GG+  G+DR++
Sbjct: 436 ATGYSELVDPVVQRERFVDQARQLARGDDEAMPLDEEFLRALEHGMPPSGGMGMGVDRLL 495

Query: 548 MLLLGAKNVREVSLFP 563
           M + G   +RE  LFP
Sbjct: 496 MAITGLG-IRETILFP 510


>gi|296876143|ref|ZP_06900197.1| lysine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296432854|gb|EFH18647.1| lysine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 496

 Score =  197 bits (502), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 64/354 (18%), Positives = 129/354 (36%), Gaps = 27/354 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             D+     ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSGHLKEKYSELDKEQLHDLNETAIIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ +    I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGVEGEIMRTDM--GELSIKVTHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +
Sbjct: 150 KFHGLSDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E +++   +       +      I  ++  +R        
Sbjct: 269 FTSIEVYQAYADFHDIMDLTEGIIQHAAKAVHGDGPIDYQGTEIKINEPFKRVHMVDA-- 326

Query: 294 RNPIIMHNVTEHFVHSEFRVFSK-ILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                +  +T      +        L+      V     + G    AF +   E
Sbjct: 327 -----IKEITGVDFWQDMTFEEAVALANEKHVPVEKHYTEVGQIINAFFEEFVE 375



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      +  P       K N        +++L     E A+   
Sbjct: 365 IINAFFEEFVEET--LTQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     LQ F     +KE+ ++   G       A + GMPP GG+  GIDR+VMLL  
Sbjct: 423 ELNDPIDQLQRFEAQARAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTN 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 VTTIRDVLLFPTMK 496


>gi|91775150|ref|YP_544906.1| lysyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|123380554|sp|Q1H372|SYK_METFK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|91709137|gb|ABE49065.1| lysyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 509

 Score =  197 bits (502), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 61/298 (20%), Positives = 121/298 (40%), Gaps = 22/298 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y       L    +G  V ++G +   R  G   F  ++D  G  Q+    ++       
Sbjct: 58  YDAVEAEALESQALG--VAIAGRMMLKRVMGKASFATVQDRSGRIQIFITRENVGEATYD 115

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           + +   +  I       +A        TG++ +   ++ +L+ +   PLP        + 
Sbjct: 116 AFKKWDLGDI------IAARGTLFKTKTGELSVKVSELRLLTKSLR-PLPEKFHGLADQE 168

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            +++ R++DL   +   K  V R++I+ ++R  M++  F+E  TP+L        A+ F+
Sbjct: 169 TKYRQRYVDLIVSEETRKTFVARSKIVAAIRAFMLSHEFLEVETPMLHPIPGGAAAKPFI 228

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y +  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   
Sbjct: 229 THHNALDLQMY-MRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SVRHNPEFTMMEFYA 286

Query: 242 SFVEQDDILNTMENVLR---------GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           ++ +   +++  E+ +R          V E       +   F R+    AI++Y    
Sbjct: 287 AYTDYKWLMDFTESCIRAAAIAACGSAVVEYQGRELDLGKPFERLTIIGAIQKYAPQY 344



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 5/128 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E +  +  +     P       + +D       +Y+L   G EIA+G    + +E
Sbjct: 380 FEETAESQLWNPTY-IIDYPVEVSPLARASDSDPSITERYELFITGREIANGFSELNDAE 438

Query: 503 VMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
                F     +KE  ++      G   RA + GMPP GG   GIDR+VMLL  + ++R+
Sbjct: 439 DQAARFHAQVAAKEAGDDEAMYYDGDFIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRD 498

Query: 559 VSLFPMSQ 566
           V LFP  +
Sbjct: 499 VILFPHMR 506


>gi|323439543|gb|EGA97264.1| asparaginyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442218|gb|EGA99849.1| asparaginyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 432

 Score =  197 bits (502), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 77/322 (23%), Positives = 123/322 (38%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 11  KDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEIFKLAKEITQESS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++S A + P+     + +       +R 
Sbjct: 71  LYVTGTITEDNRSDL-------GYEMQVKSIEVISEAHDYPITP---KNHGTEFLMDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +
Sbjct: 121 LWLRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 181 F--LSQSGQLYLEAA-AMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESL 237

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDAI      G D  +
Sbjct: 238 EIQEQYVTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIE 297

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 298 WGEDFGAPHETAIANHYDLPVF 319



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 31/194 (15%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE---- 433
            L +   E    +L+            D ++F            ++ G  +         
Sbjct: 256 KLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHYD 315

Query: 434 -FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFE 490
              +I ++P                PF M       E++   DL++ + +         E
Sbjct: 316 LPVFITNYP------------TKIKPFYMQPNPENEETVLCADLIAPEGYG--------E 355

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R    E++ Q     G+     E  +       + G  PH G   G++R V  +
Sbjct: 356 IIGGSERVDDLELLEQRVKEHGLD----EEAYSYYLDLRRYGSVPHCGFGLGLERTVAWI 411

Query: 551 LGAKNVREVSLFPM 564
            G ++VRE + FP 
Sbjct: 412 SGVEHVRETAPFPR 425


>gi|149927858|ref|ZP_01916109.1| lysyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149823480|gb|EDM82711.1| lysyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 510

 Score =  197 bits (501), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 62/280 (22%), Positives = 118/280 (42%), Gaps = 20/280 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V +SG +   R  G   F  ++D  G  Q   N +     +    +   +    G +
Sbjct: 66  GIEVSVSGRMMLKRVMGKASFATVQDGTGRIQFYINNEGVGEGVHGEFKHWDL----GDI 121

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RD 136
           ++   +    N   G++ +   +I +L+ +   PLP        + I+++ R++DL   +
Sbjct: 122 IAAKGKLFKTN--KGELSVHCTEIHLLAKSLR-PLPDKFHGLADQEIKYRQRYVDLIVSE 178

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
                 V R+R ++S+R  M    F+E  TP+L        A+ F+          Y L 
Sbjct: 179 ETRSTFVARSRAMSSVRNFMADHGFLEVETPMLHPIPGGASAKPFITHHNALDMEMY-LR 237

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D+++  E 
Sbjct: 238 IAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYWNYRDLMDFTEQ 296

Query: 256 VLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           V++      +    ++           F R+   +AI++Y
Sbjct: 297 VIQHAATTATGSAKLTYQGRDLDLSKPFARLTIVEAIQKY 336



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 57/306 (18%), Positives = 101/306 (33%), Gaps = 40/306 (13%)

Query: 275 LRICYDDA--IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
             I + +A  +  Y    P+L    ++    E          ++ +S     E   +   
Sbjct: 222 PFITHHNALDMEMYLRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFY 281

Query: 333 GGGGNRAFCDRMNEWARSQ------GQPGLAYIFWRLDESGN---VAGMGPVAKHLNIVN 383
               N        E           G   L Y    LD S     +  +  + K+     
Sbjct: 282 AAYWNYRDLMDFTEQVIQHAATTATGSAKLTYQGRDLDLSKPFARLTIVEAIQKYFPEYG 341

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCS--FAADARNHIAQELGIINCNCFEFCWIMDFP 441
           TE ++    ++   +   +  D             +  + +E        +E  +I+D+P
Sbjct: 342 TEDLQNIDYLKKALAKKGVHVDKEPALKNVGIGALQLALFEETS--ESLLWEPTFIVDYP 399

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
                                       + +D  S    +++L   G EIA+G    +  
Sbjct: 400 ---------------------VEVSPLARASDANSQITERFELFITGREIANGFSELNDP 438

Query: 502 EVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F     +KE  ++          RA + GMPP GG   GIDR++ML+  + N+R
Sbjct: 439 EDQADRFKKQVEAKEAGDDEAMFFDADFIRALEYGMPPTGGCGIGIDRLMMLITDSPNIR 498

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 499 DVILFP 504


>gi|21672688|ref|NP_660755.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009350|sp|Q8K9C5|SYK_BUCAP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|21623328|gb|AAM67966.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 503

 Score =  197 bits (501), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 70/295 (23%), Positives = 133/295 (45%), Gaps = 14/295 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y   +  +L V +V   V ++G + + R  G   F  ++D  G  Q+         +   
Sbjct: 50  YENKTINELKVLNV--EVTIAGRMIQRRIMGKASFFTLQDMEGKIQIYTREKEITSDFYN 107

Query: 64  -SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              +   +  I G+      E I     TG++ + ++K++IL+ +   PLP        +
Sbjct: 108 NHFKKWDIGDILGI------EGILFKTKTGELSIFSKKLKILTKSLR-PLPDKFHGLSNQ 160

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL  +    NI K R++II  +R  MI  NF+E  TP+L        AR F
Sbjct: 161 EKRYRKRYLDLISNNQLFNIFKNRSKIIRFIRNFMIENNFLEVETPMLHNIPGGANARPF 220

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GF+R F++   FR+E   +   P EF  ++  
Sbjct: 221 ITYHNEINEEMY-LRIAPELYLKQLIVGGFERIFELNRNFRNEGVSARHNP-EFTMMEAY 278

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           +++   +D++N  EN+L+ + +     + +  N   + ++   ++    +  L+ 
Sbjct: 279 IAYSNYEDMMNFTENLLKNIIKSICGKSEIKYNKYYLNFNIPFKKLTMKESILQF 333



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 6/149 (4%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA  +GI   + +   +I +   +E   E K +         P       + ND  S  
Sbjct: 350 KIANNIGIEIKDNWNIGYIEN-EIFEKTVE-KNLIQPTFITEYPVEVSPLARRNDFNSNV 407

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++L   G+EI +G    + SE     F N     E  +N+          A + G+P
Sbjct: 408 TDRFELFIAGYEIGNGFSELNDSEDQKNRFLNQMKIAEKEKNKDMLYDENYIEALKYGLP 467

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G+  GIDR++M+L    ++R+V LFP
Sbjct: 468 PTSGLGIGIDRLIMILTNQISIRDVILFP 496


>gi|269118661|ref|YP_003306838.1| lysyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268612539|gb|ACZ06907.1| lysyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 494

 Score =  197 bits (501), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 66/324 (20%), Positives = 123/324 (37%), Gaps = 22/324 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
               + +G +   R  G   F  I+D  G  Q     D+   E  +  +   V    G+ 
Sbjct: 51  DKTFKTAGRIVAFRRMGKNGFGHIQDLSGKIQYYVKKDTVGEENYEIYKKLGVGDFIGI- 109

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRD 136
                E       TG++ L A   E+LS     PLP           R++ R++DL   +
Sbjct: 110 -----EGTLFRTQTGELTLRASSFEVLSK-NIRPLPEKFHGLTDVETRYRQRYVDLVMNN 163

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALP 195
            + +  + R +I+  +R  +  + F+E  TP+L   +    A+ F+         F+ L 
Sbjct: 164 DVKETFITRFKILRFIRNFLENKGFLEVETPMLHPIAGGANAKPFITHHNALDMDFF-LR 222

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF++ F+I   FR+E       P EF  L++  ++ + +DI+N  E 
Sbjct: 223 IAPELYLKRLLVGGFEKVFEINRSFRNEGTSIKHNP-EFTMLELYQAYADFEDIMNLTEE 281

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++  + EE      ++     I +    +R           I M +  +     +    +
Sbjct: 282 LVSSLVEELFGTTKLTYQDTEIDFTRPWKR-----------IKMKDAVKDATGFDLDSIN 330

Query: 316 KILSVNPGYEVWAIPAKGGGGNRA 339
                    +   IP +       
Sbjct: 331 SDEEALNLVKSMNIPLEKDKAYTK 354



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPP 535
            ++++   G E A+     +      + F      KE  ++          RA + GMPP
Sbjct: 398 DRFEMFIYGREHANAFSELNDPVEQKERFDAQEKMKEAGDDEAHETDLDYIRALEYGMPP 457

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG+  GIDR+ MLL  + ++R+V LFP
Sbjct: 458 AGGLGIGIDRLTMLLTDSFSIRDVLLFP 485


>gi|303248492|ref|ZP_07334750.1| lysyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302490112|gb|EFL50032.1| lysyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 529

 Score =  197 bits (501), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 65/339 (19%), Positives = 129/339 (38%), Gaps = 18/339 (5%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
            + G++ +    RL+G +  +R  G + F  ++D  G  QV A  D+   ++  + +   
Sbjct: 79  DEAGLAALDRTFRLAGRIVALRSFGKVAFFTVQDASGRLQVFAERDTLGTDVYSTFKKFD 138

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           +    G ++  + +       TG++ L A  I++L+ +   PLP           R++ R
Sbjct: 139 I----GDIVGVTGKLFRTK--TGELTLHAATIKLLTKS-MRPLPEKYHGLKDVETRYRQR 191

Query: 130 FLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL       +    RT+I+  +R  +    F+E  TP++ A      A+ F+      
Sbjct: 192 YVDLIVTPKAVEIFKARTKIVRELRAFLDTAGFMEVETPMMQAIPGGATAKPFITHHNAL 251

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
             S Y +  AP+ Y + L+  GF+R +++   FR+E   +   P EF   +   +F   +
Sbjct: 252 DMSLY-MRIAPELYLKRLLVGGFERVYEVGRNFRNEGISTRHNP-EFTMCEFYWAFARYN 309

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
           D+++  E +   +    +  + V      I         G     +     +  +     
Sbjct: 310 DLMDLTERLFGHIARAVTGSDAVEYQGQTI-------HLGPGWARVPFHESLQTIGGIDP 362

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                  +    V    E      K G       D   E
Sbjct: 363 AVYNDFDAAKALVEKSGEKVLKGEKLGKVQAKLFDIFVE 401



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 58/329 (17%), Positives = 103/329 (31%), Gaps = 33/329 (10%)

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA--IRRYGTDKPDLRNPIIM 299
           +F++    +     +++ +          +     I + +A  +  Y    P+L    ++
Sbjct: 217 AFLDTAGFMEVETPMMQAI-------PGGATAKPFITHHNALDMSLYMRIAPELYLKRLL 269

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
               E          ++ +S     E                  + E  R  G     +I
Sbjct: 270 VGGFERVYEVGRNFRNEGISTRHNPEFTMCEFYWAFARYNDLMDLTE--RLFG-----HI 322

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGDPLKFCSFAADARN 418
              +  S  V   G                 L    G D   +   D  K     +  + 
Sbjct: 323 ARAVTGSDAVEYQGQTIHLGPGWARVPFHESLQTIGGIDPAVYNDFDAAKALVEKSGEKV 382

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
              ++LG +    F+  ++           E K+   H  +  P       + N      
Sbjct: 383 LKGEKLGKVQAKLFD-IFV-----------EPKLIEPHFIYHYPTEISPLSRRNTDDPTI 430

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++L   G E+A+     +      Q F      KE  ++          RA + GMP
Sbjct: 431 TDRFELFIAGREMANAFSELNDPVDQRQRFEEQVREKEAGDDEAHRMDDDYVRALEYGMP 490

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VMLL    ++REV LFP
Sbjct: 491 PAAGEGIGIDRLVMLLTDQASIREVILFP 519


>gi|261367898|ref|ZP_05980781.1| lysine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282570710|gb|EFB76245.1| lysine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 501

 Score =  197 bits (501), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 59/289 (20%), Positives = 120/289 (41%), Gaps = 19/289 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            ++ G  V L+G +   R  G   F  +RD  G  Q+    D    E   + +   +   
Sbjct: 58  EAETGKIVTLAGRMMSKRVMGKASFAHLRDQKGDIQIFVKRDLLGDEAYAAFKKLDI--- 114

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    E     +  G+I +   ++  L     LPLP           R++ R++DL
Sbjct: 115 -GDIIGCRGEVFRTKM--GEISVRVNELT-LLSKSLLPLPEKFHGLTDREARYRQRYVDL 170

Query: 134 RRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +  + +  +KR+ I+  +R  +  + F+E  TPILT       AR FL          
Sbjct: 171 IVNPDVKQTFIKRSAILRELRSFLDGKGFLEVETPILTPFEIGASARPFLTHHNTLDMDM 230

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L    + Y + L+  G DR +++   FR+E       P EF  +++  ++ +   +++
Sbjct: 231 -VLRIETELYLKRLIVGGMDRVYEVGRIFRNEGMDPKHNP-EFTTIELYQAYTDYHGMMD 288

Query: 252 TMENVLRGVFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPD 292
            +E +++ V ++            +   +++ R+   +A+++Y     D
Sbjct: 289 LVEEMMKTVAQKVCGSLQITYQGKDIDLSHWERMTMTEAVKKYSGVDFD 337



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 5/96 (5%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVML-----QAFSNVGISKEVVENRFGGLYRAFQ 530
                +++   N  E  +     +           Q      I              A +
Sbjct: 402 PAITERFEYFINATEFGNAFSELNDPIDQKGRFERQVAERKQIDPASKAQVDYDYVTALE 461

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG+  G+DR+VMLL  + ++R+V LFP  +
Sbjct: 462 YGLPPTGGLGFGVDRLVMLLTDSASIRDVLLFPTMK 497


>gi|306825318|ref|ZP_07458660.1| lysine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304432754|gb|EFM35728.1| lysine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 496

 Score =  197 bits (501), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 63/342 (18%), Positives = 127/342 (37%), Gaps = 20/342 (5%)

Query: 10  GDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            DL      ++     ++G +   R  G + F  ++D  G  Q+    D+   E     +
Sbjct: 49  ADLDKEQLHELNETATIAGRLVTKRGKGKVGFAHLQDRDGQIQIYVRKDTVGDENYDIFK 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +    G  +    E +  ++  G++ + A  I  LS A   PLP            +
Sbjct: 109 KADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPEKFHGLTDVETIY 161

Query: 127 KYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +       V R++II+ +R  +   +F+E  TP+L   +   A    +   
Sbjct: 162 RKRYLDLISNRESFDRFVTRSKIISEIRRYLDGHDFLEVETPVLHNEAGGAAAKPFITHH 221

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +
Sbjct: 222 NAQNIDMVLRIALELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTMIEVYQAYAD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             DI++  E +++   +       V+     I  ++  +R             +  +T  
Sbjct: 281 FHDIMDLTEGIIQHAAKAVKGDGPVNYQGTEIKINEPFKRVHMVDA-------IKEITGV 333

Query: 306 FVHSEFRVFSK-ILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
               +        L+      V     + G    AF +   E
Sbjct: 334 DFWQDLTFEEAVALANEKHVPVEKHYTEVGHIINAFFEEFVE 375



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K N        +++L     E  +     +     L  F     +KE+ ++   G     
Sbjct: 396 KKNPEDERFTDRFELFIMTKEYGNAYSELNDPIDQLSRFEAQAKAKELGDDEATGIDYDY 455

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 456 IEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 496


>gi|289550765|ref|YP_003471669.1| Asparaginyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|315658261|ref|ZP_07911133.1| asparagine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|289180297|gb|ADC87542.1| Asparaginyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|315496590|gb|EFU84913.1| asparagine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 430

 Score =  197 bits (501), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 77/322 (23%), Positives = 121/322 (37%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +  D   F++AK +  E  
Sbjct: 9   KQHLNQEVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSAVDEETFQLAKDITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   I         E+    I+++  A + P+     + +       +R 
Sbjct: 69  LYVTGTISEDNRSDI-------GYEMQVTSIQVIHEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II +         + +   PILTAS+PEG  +       +Q +
Sbjct: 119 LWLRSKKQHAVMKIRNEIIRATYEFFDTHGYTKIDPPILTASAPEGTSELFHTKYFDQDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A      F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 179 F--LSQSGQLYLEAA-AMAHRNVFSFGPTFRAEKSKTRRHLIEFWMIEAEMAFTTHAESL 235

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  V +      T+                  F RI YDDAI      G D  +
Sbjct: 236 EVQEQYVAHVVQSVLENCTLELKLLDRDTSKLEKVATPFPRITYDDAIDYLKEQGFDDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
             +     + T    H +  VF
Sbjct: 296 WGDDFGAPHETAIANHYDLPVF 317



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 19/128 (14%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGME--SLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           D P +  N        +  PF M        ++   DL++ + +         EI  G  
Sbjct: 313 DLPVFIIN-----YPTSIKPFYMQPNPDNNNTVLCADLIAPEGYG--------EIIGGSE 359

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R +  E++ +      +     E  +       + G  PH G   G++R V  + G ++V
Sbjct: 360 RINNLELLEERIKQYHLD----EESYSYYLDLRRYGSVPHSGFGLGLERTVAWISGVEHV 415

Query: 557 REVSLFPM 564
           RE S FP 
Sbjct: 416 RETSPFPR 423


>gi|221632875|ref|YP_002522097.1| lysyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156597|gb|ACM05724.1| lysyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 529

 Score =  197 bits (501), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 63/288 (21%), Positives = 104/288 (36%), Gaps = 9/288 (3%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V L+G V  VR  G  +F  IRD  G  Q+    +    +     +    L       
Sbjct: 56  EPVTLAGRVVSVRDMGRTVFSHIRDGSGAIQLFLRREFVGDDQLAWFKRYVDLND----- 110

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDT 137
              A+       TG++ L    + +LS A   P P           R++ R++DL     
Sbjct: 111 FVEADGHLFRTRTGEVSLEVHALRLLSKAL-NPPPDKWHGLTDVETRYRQRYVDLMANPD 169

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
             +  V R R+I ++R  +    F+E  TP L       A              + L  +
Sbjct: 170 TRQIFVTRARVIRAIRQYLDERGFLEVETPTLQPIYGGAAARPFTTYYHALDQTFYLRIS 229

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + Y + L+  G++R ++I   FR+E   +   P EF  L+   ++ +  DI+   E ++
Sbjct: 230 DELYLKRLLVGGYERVYEICKDFRNEGIDARHNP-EFTMLEFYAAYADYHDIMQMCEELI 288

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN-PIIMHNVTE 304
                E     T       I       R    +  LR   I    VT+
Sbjct: 289 VFAAREALGTLTFQWGDTVIDLTPPWARMSLREALLRFTGIDFLEVTD 336



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF--- 522
           +   K  D   +   ++ L   G E+A+     +     L  F      +   +      
Sbjct: 389 LAKRKPEDPRLV--ERFQLFVGGLELANAYTELNDPLDQLYRFLEQARDRAQGDEEAMPI 446

Query: 523 -GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
                 A   GMPP GG   GIDR+VML      +REV LFP  +     L
Sbjct: 447 DEDFINALMYGMPPTGGFGLGIDRLVMLFTNRPTIREVILFPQLRTKPQPL 497


>gi|326773885|ref|ZP_08233167.1| lysine--tRNA ligase [Actinomyces viscosus C505]
 gi|326636024|gb|EGE36928.1| lysine--tRNA ligase [Actinomyces viscosus C505]
          Length = 562

 Score =  197 bits (501), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 97/586 (16%), Positives = 181/586 (30%), Gaps = 142/586 (24%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            +    V ++G V  +R  G + F+ ++D  G T        A      +  + +   +D
Sbjct: 87  QETDDVVGVAGRVVFLRNTGRLCFVTLQDGAGTTLQAMLSAKALPAEGHTALAAFKADVD 146

Query: 75  -GLVMSRSAETINANIITGQIELSAQ--------------------KIEILSVAEELPLP 113
            G  +      I++    G++ + A+                       I S A      
Sbjct: 147 LGDHLFVHGRVISSR--RGELSVMAEPVLREGAEAASAGDDDVEVPAWRIASKALRPLPK 204

Query: 114 VFGER-----EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTP 167
            +           E  R + R LDL      +++V+ R  ++ S+R      +++E  TP
Sbjct: 205 TWTNEAGEAVTLSEEQRVRRRELDLLTRPAARDMVRTRAAVVRSIRENFFRRDYLELETP 264

Query: 168 ILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +L        AR F+          Y L  A + Y +  +  G DR F+I   FR+E   
Sbjct: 265 MLQVIHGGAAARPFITHMNAFDMDLY-LRIATEIYLKRAVVGGVDRVFEINRNFRNEGAD 323

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           S   P EF  L+   ++ + D +     N+++    +                       
Sbjct: 324 SSHSP-EFTALEAYEAYSDYDGMAELTRNLVQQAARD----------------------- 359

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
             D P+    + + + TE+ +  E+                              D    
Sbjct: 360 AFDLPEGGEVVTLADGTEYDLSGEWD---------------------------KIDLYTS 392

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406
            + + G+                     +          A   ++ ++  D         
Sbjct: 393 VSEALGEE--------------------ITVETPREQLVAYAEKIGLEIDDYAV------ 426

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
                 A      I +EL  +    +   ++ DFP     E+   +   H          
Sbjct: 427 ------AGKVVEDIFEEL--VGNKLWAPTFVYDFP-----EDTSPLTRYHR--------- 464

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF---- 522
                         ++DL   GFE A+         V  + F    ++    +       
Sbjct: 465 -------SKPGLTEKWDLYVRGFETATAYSELADPVVQRERFEAQALAAAKGDPEAMILD 517

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
                A + G PP GG+  GIDR++M+L G   +RE   FP+ +  
Sbjct: 518 EDFLVAMEQGFPPSGGMGMGIDRLLMVLTGQG-IRETITFPLVKRG 562


>gi|260434775|ref|ZP_05788745.1| lysyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260412649|gb|EEX05945.1| lysyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 502

 Score =  197 bits (501), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 127/349 (36%), Gaps = 23/349 (6%)

Query: 6   THSCGDL-GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           TH   DL    +    V ++G V   R  G + F  + D  G  Q+         + A  
Sbjct: 39  TH--ADLPKGEERDVSVSVAGRVMTRRVMGKLAFFTLADETGSIQLFLEKAGLEAQQAGW 96

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
            +    L   G  +  S      +   G++ +      +L+ A + PLP           
Sbjct: 97  FKQITSLVDSGDWLGVSGTLRRTD--RGELSVKVSDWRMLTKALQ-PLPDKWHGLADVEK 153

Query: 125 RFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182
           R++ R+LDL       +   +R R+++ +R  +   +F+E  TP+L +      AR F  
Sbjct: 154 RYRQRYLDLVVSPDSRETFRRRARLVSGIRRWLDQRDFLEIETPVLQSEPGGADARPFET 213

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                      L  A + + + L+  GF+R +++   FR+E   +   P EF  +++  +
Sbjct: 214 HHNALDLPL-TLRIATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP-EFTSVEIYQA 271

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           + +   ++   E ++  V +E     T++     I      RR             MH +
Sbjct: 272 YSDYIGMMELTEQMVSAVCQEVCGTTTITYQGTEIDLAPPWRR-----------ATMHEL 320

Query: 303 TEHFVHSEFRVFS--KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
            +     +F  FS  +  +     +   +P       R   +   +   
Sbjct: 321 VQDATGLDFNSFSSREAAAAAMTAKGLHVPELADSVGRLLNEAFEQAVE 369



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 58/186 (31%), Gaps = 35/186 (18%)

Query: 392 DMQDGDSCFFIAGDPLKFCSFAADARN-HIAQELGIINCNCFE---------FCWIMDFP 441
           D    D   F + +       A       +A  +G +    FE           ++ D+P
Sbjct: 323 DATGLDFNSFSSREAAAAAMTAKGLHVPELADSVGRLLNEAFEQAVETTLIQPTFVTDYP 382

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
                 E   +   H                        +++L   G E A+        
Sbjct: 383 V-----EISPLARPHR----------------SKPGLVERFELFIVGREHANAFSELTDP 421

Query: 502 EVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               Q        K       +        A + GMPP GG+  GIDR+VMLL  + ++R
Sbjct: 422 VDQRQRLEAQQARKAAGDLEAQGLDEDFVTALEVGMPPTGGLGIGIDRLVMLLTDSPSIR 481

Query: 558 EVSLFP 563
           +V  FP
Sbjct: 482 DVIAFP 487


>gi|326316036|ref|YP_004233708.1| lysyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323372872|gb|ADX45141.1| lysyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 518

 Score =  197 bits (501), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 62/306 (20%), Positives = 123/306 (40%), Gaps = 35/306 (11%)

Query: 7   HSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHY-----GITQVV 51
           H   DL      +           V ++G +   R  G   F  ++D       G  Q+ 
Sbjct: 51  HHAADLQAQYAETEAETLEANPVPVSVAGRMMLKRVMGKASFATVQDGSLGATGGRIQLY 110

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              D+   E   + +   +  I G      AE       TG++ +    + +L+ +   P
Sbjct: 111 VTRDAIGEEAYAAFKHWDLGDIVG------AEGTLMKTKTGELSVKVTTLRLLTKSLR-P 163

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILT 170
           +P        + ++++ R++DL  D   +   + R++ ++ +R  M+   F+E  TP+L 
Sbjct: 164 MPDKFHGVADQEVKYRQRYVDLMTDEAARKRFIARSKAVSGIREFMVQHGFLEVETPMLH 223

Query: 171 A-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F+      +   Y L  AP+ Y + L+  GF+R F+I   FR+E   S R
Sbjct: 224 PIPGGANAKPFVTHHNALEQEMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVR 281

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYD 280
              EF  ++   ++    D+++  E ++R    + +    ++           F R+   
Sbjct: 282 HNPEFTMMEFYAAYWNYRDLMDFTEQLVRDAATKAAGSLQLTYQGRAVDLSQPFERLTIR 341

Query: 281 DAIRRY 286
           +AI R+
Sbjct: 342 EAILRH 347



 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           ++E   E+K        F M      S   + ND       +++L   G E  +G    +
Sbjct: 388 YFEETVEDKLWQPT---FIMEHPTEISPLARANDTRPEVTERFELYITGREFGNGFSELN 444

Query: 500 MSEVMLQAFSNVGISKEVVEN---RFGG-LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            +E     F +   +K+  ++    F     RA + GMPP GG   GIDR++MLL  + +
Sbjct: 445 DAEDQAARFQSQVEAKDSGDDEAMYFDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSPS 504

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 505 IRDVILFP 512


>gi|317153560|ref|YP_004121608.1| asparaginyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943811|gb|ADU62862.1| asparaginyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 455

 Score =  197 bits (501), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 69/353 (19%), Positives = 124/353 (35%), Gaps = 43/353 (12%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RT     L  +     + + GWV   R   G  FL++ D  G+  + A  D      A
Sbjct: 1   MKRTKIKAALAATGPMDEIVIKGWVRTKRDSKGFSFLELNDGSGLLNIQAVVDHTPEIEA 60

Query: 63  KSVR--SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              R  +   +C+ G ++    +         + E+  + +E+L  A++   P+  +R  
Sbjct: 61  ALARIGTGASVCVTGALVESPGKG-------QKWEIRGRGLEVLGEADQETFPLQKKRHS 113

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R     L  R +        R+ +  ++      + F    TPI+T S  EGA + 
Sbjct: 114 DEFLR-TIAHLRPRTNKYGAMFRIRSELAQAIHKFFADKGFFYIHTPIITGSDCEGAGEM 172

Query: 181 LVPSRVNQG-------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
              + +  G        F+  P       Q    + A      +   P FR E+  + R 
Sbjct: 173 FRVTSLEPGSTESADKDFFGKPAQLTVSGQLSAEMFALSLGDVYTFGPTFRAENSNTPRH 232

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------------- 271
             EF+ ++ EM+F +  D ++  E +++ +     +                        
Sbjct: 233 VAEFWMIEPEMAFADLADNMDLGEEMIKYLVTHILDNCPDDVDLFAKWVDKDLMPTLENI 292

Query: 272 --NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
               F R+ Y +AI      K +   P+   M   TEH        F K + V
Sbjct: 293 LKEPFKRLPYTEAIDILKNAKKEFEYPVEWGMDLQTEHERFLCEEQFKKPVYV 345



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 54/147 (36%), Gaps = 24/147 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +  ++ D+P                PF M          +D  ++ A  
Sbjct: 330 HERFLCEEQFKKPVYVHDYP------------KVIKPFYMR-------LNDDGRTVAAMD 370

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    E+  G  R    +++L     + +     E  +     + + G  PH G   
Sbjct: 371 C-LVPRIGELIGGSQREERLDMLLARMQEMRLH----EEDYWWYLDSRRFGTAPHAGFGM 425

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNF 568
           G +R++ML+ G  N+R+V  FP + N 
Sbjct: 426 GFERMLMLVTGVANIRDVMPFPRTPNS 452


>gi|221124356|ref|XP_002162882.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 537

 Score =  197 bits (501), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 64/325 (19%), Positives = 136/325 (41%), Gaps = 27/325 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY-----GITQVVANPDSAC 58
           Y   +  +L    +G+  +++G +   R  G   F  ++D       G  Q+    +   
Sbjct: 79  YNDKTTEELAA--LGATAKVAGRMMLKRVMGKASFCTLQDSSFGPSGGRIQLYVRGEDVG 136

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            ++  + +   +  I       +AE       TG++ + A  I +L+ +   P+P     
Sbjct: 137 VDLYAAFKHWDLGDI------VAAEGTLFKTKTGELSIHATSIRLLTKSLR-PMPDKFHG 189

Query: 119 EYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
              +  +++ R++DL  D    K  V R++ ++++R  M++ NF+E  TP+L        
Sbjct: 190 MADQETKYRQRYVDLMTDVESRKRFVARSKAVSALREFMVSHNFLEVETPMLHPIPGGAN 249

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F           + L  AP+ Y + L+  GFDR F+I   +R+E   S R   EF  
Sbjct: 250 AKPFKTHHNALDQEMF-LRIAPELYLKRLIVGGFDRVFEINRSYRNEGI-SVRHNPEFTM 307

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSN---------GNTVSNNFLRICYDDAIRRYG 287
           ++   ++    D+++  E ++R    + +             +   F R+   +AI++Y 
Sbjct: 308 MEFYAAYWNYQDLMDYTEKLIRDAARKATGGLQLSYAGKPVDLEQPFERLTIVEAIQKYT 367

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFR 312
               ++ +   + N  +    +E +
Sbjct: 368 DAGDNVFDATWLTNAVKKLGLTEAK 392



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           ++E   EEK  +     F M      S     ND       +++L   G E  +G    +
Sbjct: 407 YFEETVEEKLWNPT---FIMEHPTEISPLARANDDRPEVTERFELYITGREFGNGFSELN 463

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            +E     F     +K+  ++          RA + GMPP GG   GIDR++MLL  + +
Sbjct: 464 DAEDQAARFQAQVAAKDSGDDEAMHFDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSAS 523

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 524 IRDVILFP 531


>gi|260664830|ref|ZP_05865681.1| lysyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|260561313|gb|EEX27286.1| lysyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
          Length = 514

 Score =  197 bits (501), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 77/436 (17%), Positives = 155/436 (35%), Gaps = 35/436 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y+     +L         +++G +   R  G + F DI D  G  Q+    D    E 
Sbjct: 50  EKYKGEDKDELNADMP--QTKIAGRMMAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEEN 107

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +   +    G+      E       TG++ + A  +  LS A   PLP        
Sbjct: 108 YQIFKKSDLGDFLGI------EGEVMKTDTGELTVRAHHVTFLSKALR-PLPDKYHGLQN 160

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
               ++ R+LDL  +         RT+II ++R  +   +F+E  TP+L        AR 
Sbjct: 161 VEQIYRQRYLDLMTNHESYMRFVHRTKIIQAIRDYLNNRDFLEVETPVLHNIPGGAEARP 220

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A +   + L+  G +R ++I   FR+E   +   P EF +L+ 
Sbjct: 221 FITHHNALDIDLY-LRIALELPLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTELET 278

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  D+++  E +++   +  ++                   Y   + DL  P   
Sbjct: 279 YCAYWDFHDVMDEAEGIIKAAAKVVTDDGK--------------VNYQGTEIDLGKPFRR 324

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++ +         F K ++++   +V                 +N +    G+  +   
Sbjct: 325 VHMVDLIKEQTGVDFWKPMTLDEAKKVAEEHGIHVEPFWKVGHIINAFFEEFGEKSIVNP 384

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVR---LDMQDGDSCFFIAG--DPLKFCSFAA 414
            +     G+   + P+AK          R     + M+ G++   +    D  +      
Sbjct: 385 TFVY---GHPVEISPLAKKNADDPRFTDRFEIFIMGMEYGNAFSELNDPIDQRERFEAQM 441

Query: 415 DARNHIAQELGIINCN 430
             R+    E  +I+ +
Sbjct: 442 AERDAGNDEADVIDED 457



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 6/152 (3%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+E GI     ++   I++  F E+ E  K I      +  P       K N      
Sbjct: 350 KVAEEHGIHVEPFWKVGHIINAFFEEFGE--KSIVNPTFVYGHPVEISPLAKKNADDPRF 407

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMP 534
             ++++   G E  +     +      + F      ++   +          RA + GMP
Sbjct: 408 TDRFEIFIMGMEYGNAFSELNDPIDQRERFEAQMAERDAGNDEADVIDEDFVRALEYGMP 467

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 468 PTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 499


>gi|78211662|ref|YP_380441.1| lysyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|123770824|sp|Q3ANE6|SYK_SYNSC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78196121|gb|ABB33886.1| lysyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 502

 Score =  197 bits (501), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 65/356 (18%), Positives = 127/356 (35%), Gaps = 28/356 (7%)

Query: 6   THSCGDLGVSDV----GSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           +H   +L V+      G      V ++G V   R  G + F  + D  G  Q+       
Sbjct: 30  SHRMAELQVTHADLPKGEERDVSVSVAGRVMTRRVMGKLAFFTLADETGSIQLFLEKAGL 89

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             +     +    L   G  +  S      +   G++ +      +L+ A + PLP    
Sbjct: 90  EAQQEGWFKQITSLVDSGDWLGVSGTLRRTD--RGELSVKVSDWRMLTKALQ-PLPDKWH 146

Query: 118 REYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
                  R++ R+LDL       +   +R R+++ +R  +   +F+E  TP+L +     
Sbjct: 147 GLADVEKRYRQRYLDLVVSPDSRETFRRRARLVSGIRRWLDQRDFLEIETPVLQSEPGGA 206

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F             L  A + + + L+  GF+R +++   FR+E   +   P EF 
Sbjct: 207 DARPFETHHNALDLPL-TLRIATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP-EFT 264

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            +++  ++ +   ++   E ++  V EE     T++     I      RR          
Sbjct: 265 SVEIYQAYSDYVGMMELTEQMVSAVCEEVCGTTTITYQGTEIDLAPPWRR---------- 314

Query: 296 PIIMHNVTEHFVHSEFRVFS--KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
              MH + +     +F  FS  +  +     +    P       R   +   +   
Sbjct: 315 -ATMHELVQDATGLDFNGFSSREEAAAAMTAKGLHAPELADSVGRLLNEAFEQAVE 369



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 57/186 (30%), Gaps = 35/186 (18%)

Query: 392 DMQDGDSCFFIAGDPLKFCSFAADARN-HIAQELGIINCNCFE---------FCWIMDFP 441
           D    D   F + +       A       +A  +G +    FE           ++ D+P
Sbjct: 323 DATGLDFNGFSSREEAAAAMTAKGLHAPELADSVGRLLNEAFEQAVETTLIQPTFVTDYP 382

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
                 E   +   H                        +++L   G E A+        
Sbjct: 383 V-----EISPLARPHR----------------SKPGLVERFELFIVGREHANAFSELTDP 421

Query: 502 EVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               Q        K       +        A + GMPP GG+  GIDR+VMLL    ++R
Sbjct: 422 VDQRQRLEAQQARKAAGDLEAQGLDEDFVMALEVGMPPTGGLGIGIDRLVMLLTDCPSIR 481

Query: 558 EVSLFP 563
           +V  FP
Sbjct: 482 DVIAFP 487


>gi|71892044|ref|YP_277774.1| lysyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|123734157|sp|Q493E1|SYK_BLOPB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71796150|gb|AAZ40901.1| lysyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 509

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 75/357 (21%), Positives = 145/357 (40%), Gaps = 28/357 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +H+   H+   + +  +   V ++G +   R  G   F+ IRD  G  Q+    +S    
Sbjct: 51  LHKKYAHTSN-VELIQLNIEVTIAGRIISQRIMGKASFITIRDAEGCIQLYITSNSLATN 109

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +      +W L   G ++   A  I     TG++ +  ++I +L+ +   PLP       
Sbjct: 110 LYDENIKQWDL---GDIL--GARGILFRTRTGELSIYCKEIRLLTKSLR-PLPDKFHGLN 163

Query: 121 PESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            +  +++ R+LDL  +   +     R+ +I+ +R  M   NF+E  TP++   +      
Sbjct: 164 NQETKYRQRYLDLIINENTRKTFKIRSLVISEIRQFMKKNNFMEVETPMMHTIAGGAIAH 223

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
             +      G    L  AP+ Y + L+  GF+R F+I   FR+E   S   P EF  +++
Sbjct: 224 PFITHHNKLGIDMYLRIAPELYLKKLVIGGFERIFEINRSFRNEGISSYHNP-EFTMMEI 282

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            M++ +  DI+  ++N+LR V ++    N              I  YG  + D ++P   
Sbjct: 283 YMAYADYRDIIILVQNLLRSVTQKILGSN--------------IINYGDYELDFKHPFTQ 328

Query: 300 HNVTE----HFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-GNRAFCDRMNEWARSQ 351
            ++ E    +   +  +    I +     +   I  K     +R       E    +
Sbjct: 329 ISIKEAILYYLPETRSQNIDDICTAVSIAKSLGIKVKSCWTLHRIHMVIFEEVIEKK 385



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 11/152 (7%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEE-EKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           IA+ LGI   +C+    I       + E  EKKI       + P       + ND     
Sbjct: 356 IAKSLGIKVKSCWTLHRIH---MVIFEEVIEKKIIQPTCVTSYPIEISPLARRNDNNPEF 412

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE-------NRFGGLYRAFQC 531
           A +++L   G EI +G    +  E   + F      K+          +       A + 
Sbjct: 413 ADRFELFIAGREIGNGFSELNDPEDQKERFLKQAYGKKNKINNNNVHIHYDEDYLIALEY 472

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP  GI  GIDR++MLL  +  +R+V LFP
Sbjct: 473 GLPPTAGIGIGIDRLIMLLTDSHTIRDVILFP 504


>gi|218888077|ref|YP_002437398.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218759031|gb|ACL09930.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 501

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 130/346 (37%), Gaps = 25/346 (7%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           +  +L   +V +    +G +   R  G + F  + D  G  Q     +    +  ++ + 
Sbjct: 54  TAEEL--ENVDTRFTCAGRIVSQRSFGKVTFFHLMDKSGRLQCYTAREVLGEDPYRNFKK 111

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             +  I G+              TG++ LS  +  +L+ +   PLP           R++
Sbjct: 112 LDIGDIVGV------SGTLFRTKTGELTLSCDQCILLTKSIR-PLPEKYHGLKDVETRYR 164

Query: 128 YRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R++DL       +   KRT I+   R  +  + F+E  TP++        A  F+    
Sbjct: 165 QRYVDLIVTPRTREIFRKRTLIVREFRRFLEDKGFMEVETPMMQPIPGGATAMPFITHHN 224

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y +  AP+ Y + L+  GF++ F+I   FR+E   +   P EF   +   ++  
Sbjct: 225 ALDMQLY-MRIAPELYLKRLLVGGFEKVFEINRNFRNEGISTRHNP-EFTMCEFYWAYAT 282

Query: 246 QDDILNTMENVLRGVFEEFSN----------GNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            +D+++  E +   V E+              +     + R+ + D++ + G  KP+  N
Sbjct: 283 FEDLMDLTEQLFAHVAEKVCGSYVVTYQGQEVDLTPGRWTRLSFHDSLEKIGGHKPEFYN 342

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
                 V ++      +V           +++ +  +G      F 
Sbjct: 343 DYEA--VRKYIRERGEKVVDGEKMAKLQAKLFDLDVEGKLIQPTFI 386



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            ++ + E  K+      +  P       + N+       +++L   G E+ +     +  
Sbjct: 371 LFDLDVE-GKLIQPTFIYHYPTDISPLSRRNNERPDVTDRFELFITGRELGNAFSELNDP 429

Query: 502 --EVMLQAFSNVGISKEVVENRF--GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
             + M              E  F      RA + GMPP  G   GIDR+VMLL  + ++R
Sbjct: 430 VDQRMRFMDQVAEKEAGDAEAHFMDEDYLRALEYGMPPAAGEGVGIDRLVMLLTDSPSIR 489

Query: 558 EVSLFP 563
           EV LFP
Sbjct: 490 EVILFP 495


>gi|108757457|ref|YP_632893.1| lysyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108461337|gb|ABF86522.1| lysyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 517

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 72/358 (20%), Positives = 129/358 (36%), Gaps = 42/358 (11%)

Query: 4   YR-THSCGDLGVSDVGSFVR-----------LSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           YR  H   ++                     ++G V  +R  G   F+ +RD  G  QV 
Sbjct: 47  YRPQHQAAEIHEKHAAQSAEEIEQAAPPPYDVAGRVVAMRSFGKAAFIKLRDRSGEIQVH 106

Query: 52  ANPDSAC--FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
              D+    +E  K       L   G V             TG++ LSA K   L+ +  
Sbjct: 107 MKKDALGDSYETFKLCDLGDFLAATGPV---------FRSKTGELTLSATKFTPLTKSLR 157

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
            PLP          +R++ R+LDL  +  + +  ++R ++I  +R  +   +F+E  TP+
Sbjct: 158 -PLPEKWHGLTDVEVRYRQRYLDLVSNPDVKQTFLRRNKLIRFIRNFLDTRDFVEVETPM 216

Query: 169 LTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           +    S   AR F           Y +  AP+ Y + L+  G +R +++   FR+E   +
Sbjct: 217 MHPLVSGAAARPFTTHHNALDIDLY-MRIAPELYLKRLVVGGLERVYEVNRNFRNEGIST 275

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
              P EF  L+   ++   +D+++  E ++    +  +    V               YG
Sbjct: 276 RHNP-EFTMLEFYQAYATYEDLMDLSEEMISEAAKAVTGDTKVK--------------YG 320

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
               D        ++TE        +  K ++         +        R   D MN
Sbjct: 321 DHVLDFGKGWKRISMTEAIREVVSGLSDKDMADADRLRHELLKTSHSEAERRAIDTMN 378



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV----GISKEVVENRFGGLYR 527
           ND       +++L   G EIA+     +        F          ++   +      R
Sbjct: 415 NDQNPDVTDRFELYVAGREIANAFSELNDPLDQKGRFQAQLDAKQRGQQETMDYDEDYIR 474

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP  G   GIDR+ ML   ++++R+V LFP
Sbjct: 475 ALEHGMPPTAGEGIGIDRLAMLFTDSQSIRDVILFP 510


>gi|254431514|ref|ZP_05045217.1| lysyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197625967|gb|EDY38526.1| lysyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 522

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 64/359 (17%), Positives = 125/359 (34%), Gaps = 29/359 (8%)

Query: 6   THSCGDLGVSDV----GSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           +HS   L  +      G      V ++G V   R  G + F  + D  G  Q+     + 
Sbjct: 30  SHSTAQLQQAHADLPNGQERDVAVAVAGRVMTRRVMGKLAFFTLADESGPIQLYLEKATL 89

Query: 58  CFEIAKSVRSEWVLCIDGLVMS---RSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                ++        I  LV +      E        G++ +  +   +LS + + PLP 
Sbjct: 90  EAACPEAPPPGAFGQITTLVDAGDLIGVEGSLRRTDRGELSVKVKSWTMLSKSLQ-PLPD 148

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRI-INSMRCRMIAENFIECSTPILT-AS 172
                     R++ R+LDL      +   +R  + +++MR  +    F+E  TP+L    
Sbjct: 149 KWHGLADVEKRYRQRYLDLIVSPHTRETFRRRALAVSAMRRWLDERGFLEIETPVLQSQP 208

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F             L  A + + + L+  GF+R +++   FR+E   +   P 
Sbjct: 209 GGADARPFETHHNALDLPL-TLRIATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP- 266

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  D++   E +L  V ++      ++     I      RR       
Sbjct: 267 EFTSVEIYQAYADYTDMMELTEQLLAHVCQQVCGTTAITYQGTAIDLAPPWRR------- 319

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSK--ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
                 MH++       +F  F+     +         +P       R   +   +   
Sbjct: 320 ----ATMHDLVLQATGLDFTGFASRAEAAAAMEAAGLVVPEPADSVGRLLVEAFEQRVE 374



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 49/141 (34%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +     +  +++D+P      E   +  AH                        +++L  
Sbjct: 373 VEDTLIQPTFVLDYPV-----ENSPLARAHR----------------SKPGMVERFELFI 411

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAG 542
            G E A+            Q        K               +A + GMPP GG+  G
Sbjct: 412 VGRETANAFSELIDPLDQRQRLEAQQARKAAGDLEAHGVDEDFLQALEVGMPPTGGLGIG 471

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR+VMLL  + ++R+V  FP
Sbjct: 472 IDRLVMLLTDSTSIRDVIAFP 492


>gi|163847001|ref|YP_001635045.1| asparaginyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222524823|ref|YP_002569294.1| asparaginyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|189083269|sp|A9WA97|SYN_CHLAA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|254782877|sp|B9LCU8|SYN_CHLSY RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|163668290|gb|ABY34656.1| asparaginyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222448702|gb|ACM52968.1| asparaginyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 440

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 71/296 (23%), Positives = 118/296 (39%), Gaps = 30/296 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV---VANPDSACFEIAKSVRSEWVLCI 73
           VG  V L+GWV+     G +IF+ +RD  G  Q      N     F  A+S+  E    I
Sbjct: 16  VGQRVTLAGWVYHKTEKGKLIFILLRDGSGTIQCVTFKKNVSEETFATAQSLTQESSCRI 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V +            G  EL  + IE++  + E P+     +E+       +R L +
Sbjct: 76  TGSVRADER-------APGGYELDVESIELIGPSHEYPITP---KEHGVEFLMAHRHLWV 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  +I + +  +  + F+   TPILTA++ EG  +       + G  Y 
Sbjct: 126 RSAKQHAILRIRAEVIAAAQEWLNEQGFVRFDTPILTATAAEGTTNLFATDYFDLGKAY- 184

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +  M   F + +   P FR E  ++ R   EF+ ++ E++F + +D +   
Sbjct: 185 LAQTGQLYVEAGM-MAFGKVYCFGPTFRAEKSKTRRHLTEFWMIEPEVAFADHEDNMRLQ 243

Query: 254 ENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRYGTDKPDLR 294
           E  +  +                            F RI YD+AI      + ++ 
Sbjct: 244 EEFVSAIVARVLERRRDDLQTLERDTTLLEQVRPPFPRITYDEAIELIAAHQGEVE 299



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 14/116 (12%)

Query: 451 KIDFAHNPFTMPQGG--MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           +   A   F M       E     DLL+ + +         EI  G  R H   ++ Q  
Sbjct: 330 RFPSAVKAFYMQPDPERPEVALCADLLAPEGYG--------EIIGGSQRIHDPILLEQRI 381

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              G+  E  E          + G  PH G   GI+R+V  + G +++RE   FP 
Sbjct: 382 REHGLRIEDYE----WYLDLRRYGTVPHSGFGMGIERVVAWITGTRHIRETIPFPR 433


>gi|238855046|ref|ZP_04645374.1| lysine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|282934832|ref|ZP_06340066.1| lysine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472616|ref|ZP_07813105.1| lysine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832290|gb|EEQ24599.1| lysine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529433|gb|EEQ68434.1| lysine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|281301104|gb|EFA93414.1| lysine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 507

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 77/436 (17%), Positives = 155/436 (35%), Gaps = 35/436 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y+     +L         +++G +   R  G + F DI D  G  Q+    D    E 
Sbjct: 43  EKYKGEDKDELNADMP--QTKIAGRMMAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEEN 100

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +   +    G+      E       TG++ + A  +  LS A   PLP        
Sbjct: 101 YQIFKKSDLGDFLGI------EGEVMKTDTGELTVRAHHVTFLSKALR-PLPDKYHGLQN 153

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
               ++ R+LDL  +         RT+II ++R  +   +F+E  TP+L        AR 
Sbjct: 154 VEQIYRQRYLDLMTNHESYMRFVHRTKIIQAIRDYLNNRDFLEVETPVLHNIPGGAEARP 213

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A +   + L+  G +R ++I   FR+E   +   P EF +L+ 
Sbjct: 214 FITHHNALDIDLY-LRIALELPLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTELET 271

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  D+++  E +++   +  ++                   Y   + DL  P   
Sbjct: 272 YCAYWDFHDVMDEAEGIIKAAAKVVTDDGK--------------VNYQGTEIDLGKPFRR 317

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++ +         F K ++++   +V                 +N +    G+  +   
Sbjct: 318 VHMVDLIKEQTGVDFWKPMTLDEAKKVAEEHGIHVEPFWKVGHIINAFFEEFGEKSIVNP 377

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVR---LDMQDGDSCFFIAG--DPLKFCSFAA 414
            +     G+   + P+AK          R     + M+ G++   +    D  +      
Sbjct: 378 TFVY---GHPVEISPLAKKNADDPRFTDRFEIFIMGMEYGNAFSELNDPIDQRERFEAQM 434

Query: 415 DARNHIAQELGIINCN 430
             R+    E  +I+ +
Sbjct: 435 AERDAGNDEADVIDED 450



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 6/152 (3%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+E GI     ++   I++  F E+ E  K I      +  P       K N      
Sbjct: 343 KVAEEHGIHVEPFWKVGHIINAFFEEFGE--KSIVNPTFVYGHPVEISPLAKKNADDPRF 400

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMP 534
             ++++   G E  +     +      + F      ++   +          RA + GMP
Sbjct: 401 TDRFEIFIMGMEYGNAFSELNDPIDQRERFEAQMAERDAGNDEADVIDEDFVRALEYGMP 460

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 461 PTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 492


>gi|291166187|gb|EFE28233.1| lysine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 508

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 69/341 (20%), Positives = 134/341 (39%), Gaps = 25/341 (7%)

Query: 6   THSCGDL---GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH   D+           V ++G +  +R HG   FL I+D  G  QV    D    E  
Sbjct: 45  THHSVDIIDKFEELEEKDVSIAGRIMLIRGHGKASFLTIQDSEGRIQVYVRQDVVGEESY 104

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              ++  +  I G+               G+I + A+++ +L+ +   PLP         
Sbjct: 105 TDFKTYDIGDIIGV------TGTVFRTHKGEITVKAKEVTLLTKSL-HPLPDKHAGLKDP 157

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDF 180
            +R++ R++DL  +   K   +KR++ I +++  +    F+E  TPIL T +    AR F
Sbjct: 158 DLRYRQRYVDLIVNPEVKESFIKRSKAIKALKEYLDNRGFLEVDTPILSTIAGGANARPF 217

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                      Y +  A + Y + L+  GF++ +++   FR+E    +  P E+  +++ 
Sbjct: 218 KTHHNTLNLEMY-MRIANELYLKRLIVGGFEKVYEMGRMFRNEGMDINHNP-EYTAIEIY 275

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++V+ ++I+   E ++  + E+ +    V      I +    RR           I M 
Sbjct: 276 QAYVDYEEIMRLTEGIVSYMAEKSTGSMVVDYQGTEIDFTPPWRR-----------ISMI 324

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
           +  + +V  +F             +   I        R   
Sbjct: 325 DAVKEYVGVDFNKIDTDEEAIAIAKEKGIELTPATMTRGHI 365



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 7/130 (5%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHM 500
           F+E   EE  +       T     +  L   D L  +   +++   N +EIA+     + 
Sbjct: 369 FFEEFCEEHMVQPTF--VTGHPVEISPLSKRDPLDTRLTHRFEAFANRWEIANAFSELND 426

Query: 501 SEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                Q F +    KE               A + G+PP GG+  G+DR++MLL  A ++
Sbjct: 427 PVDQRQRFEDQMRQKELGDDEAHEMDEDFLNAIEVGLPPTGGLGIGVDRVIMLLTNASSI 486

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 487 RDVILFPTMK 496


>gi|313899864|ref|ZP_07833367.1| lysine--tRNA ligase [Clostridium sp. HGF2]
 gi|312955479|gb|EFR37144.1| lysine--tRNA ligase [Clostridium sp. HGF2]
          Length = 502

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 68/343 (19%), Positives = 124/343 (36%), Gaps = 29/343 (8%)

Query: 2   HRY-RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           H Y RTH  G++             +    V+++G +   R  G   F+ I+D  G  Q+
Sbjct: 36  HAYQRTHKSGEIRAAYEDCTKEELEEKDLTVKIAGRIMTKRRQGKAGFMHIQDIDGQIQI 95

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    E  +  +   +  I G+      E        G++ + A+    L+ A   
Sbjct: 96  YVRKDVIGEEAYEVFKKSDLGDIVGI------EGKVMKTNHGELSVKAEVYTHLTKALR- 148

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           RF+ R++DL  +    +  + R RII +++  +  E  +E  TP+L
Sbjct: 149 PLPEKYHGLQDVEERFRRRYVDLITNENSKRIALTRPRIIRAIQNYLDGEGLVEVETPVL 208

Query: 170 TAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   AR F+         FY L  A +   + L+  G +  ++I   FR+E   + 
Sbjct: 209 QPILGGASARPFVTHHNTLDMPFY-LRIATELPLKRLIVGGLEGVYEIGRLFRNEGMDAT 267

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  ++  +++ +   +++ +E +L  V E       +      I      +R   
Sbjct: 268 HNP-EFTTVEAYVAYSDLSGMMDLVEGLLNHVAETVCGTTEIEWQDKTISLKAPFKRLHM 326

Query: 289 -------DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
                     D    +   +        +  V  K  SV    
Sbjct: 327 VDGIKEACGVDFWQEMSFADACAIAKEHDIEVEKKHNSVGHII 369



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 11/132 (8%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   EE  I   +   +P  +    +      D     A +Y+L  +G E A+     
Sbjct: 372 FFEKYVEETLIQPTYVYGHPVEISP--LAKKNAQDPR--FADRYELFIDGHEYANAFSEL 427

Query: 499 HMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      + F N    +++ ++           A + G+PP GG+  GIDR+VMLL  ++
Sbjct: 428 NDPIDQRERFENQLKLRDLGDDEANEMDTDYVEALEYGLPPTGGVGLGIDRLVMLLTNSQ 487

Query: 555 NVREVSLFPMSQ 566
            +REV LFP  +
Sbjct: 488 TIREVLLFPHMR 499


>gi|241662570|ref|YP_002980930.1| lysyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|309781153|ref|ZP_07675890.1| lysine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|240864597|gb|ACS62258.1| lysyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|308919974|gb|EFP65634.1| lysine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 514

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 64/308 (20%), Positives = 126/308 (40%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVS--DVGS--------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH  GDL     ++           V ++G +   R  G   F  ++D     Q   + D
Sbjct: 49  THHAGDLQAKYRELEQAALEAEPVQVAIAGRMMLKRVMGKASFATVQDSTDRIQFYISRD 108

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +   ++  S +   +  I       +A        TG++ ++  ++ +LS +   PLP  
Sbjct: 109 AVGEDVYASFKKWDLGDI------VAARGTLMKTKTGELSVAVTELRLLSKSLR-PLPGD 161

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 +  +++ R++DL      ++  + RT+ + S+R  M    F+E  TP+L     
Sbjct: 162 YYGLADQEQKYRQRYVDLIVSKETRDTFRARTKAMASLRNFMAGNGFMEVETPMLHPIPG 221

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R ++I   FR+E   S R   E
Sbjct: 222 GAAAKPFITHHNALDMQMF-LRIAPELYLKRLIVGGFERVYEINRNFRNEGV-SPRHNPE 279

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    + S   T++           F R+    AI+
Sbjct: 280 FTMMEFYAAYTDYRWLMDFTEQLIRQAAIDASGTATLTYQGRELDLAKPFHRLTICQAIQ 339

Query: 285 RYGTDKPD 292
           +Y     D
Sbjct: 340 KYAPQYTD 347



 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 25/136 (18%)

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
           +E  +I+D+P                            +G+D L     +++L   G EI
Sbjct: 394 WEPTFIIDYP---------------------VEVSPLARGSDTLPGITERFELFITGREI 432

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIV 547
           A+G    +  E   + F      K+  +           RA + GMPP GG   GIDR+V
Sbjct: 433 ANGFSELNDPEDQAERFRKQVEQKDAGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLV 492

Query: 548 MLLLGAKNVREVSLFP 563
           MLL  + N+R+V LFP
Sbjct: 493 MLLTDSPNIRDVILFP 508


>gi|225571840|ref|ZP_03780710.1| hypothetical protein CLOHYLEM_07814 [Clostridium hylemonae DSM
           15053]
 gi|225159504|gb|EEG72123.1| hypothetical protein CLOHYLEM_07814 [Clostridium hylemonae DSM
           15053]
          Length = 227

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 51/235 (21%), Positives = 105/235 (44%), Gaps = 9/235 (3%)

Query: 35  GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI 94
              F ++ D  G  Q     DS   E  K  +   +  I GL      E       TG+I
Sbjct: 1   KASFCNVLDQSGNIQSYVARDSLGEEAYKEFKKLDIGDIVGL------EGEVFKTKTGEI 54

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMR 153
            + A  +++LS + ++ LP           R++ R++DL  +   ++  +KR+ II+++R
Sbjct: 55  SIHATAVKLLSKSLQI-LPEKFHGLTNTDTRYRQRYVDLIMNPEVRDTFIKRSHIISAIR 113

Query: 154 CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
             +  + F+E  TP+L +++   A              + L  + + Y + L+  G ++ 
Sbjct: 114 RYLDGQGFLEVETPMLVSNAGGAAARPFETHFNALSEDFKLRISLELYLKRLIVGGLEKV 173

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           ++I   FR+E   +   P EF  +++  ++ + + +++  EN+ R V +E     
Sbjct: 174 YEIGRVFRNEGLDTRHNP-EFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGTT 227


>gi|261417990|ref|YP_003251672.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767197|ref|YP_004132698.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374447|gb|ACX77190.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112063|gb|ADU94555.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 431

 Score =  197 bits (500), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 32/297 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEI 61
           +T +  ++     G  V +  W+   R  G I+FL +RD  G  Q V    N     F+ 
Sbjct: 2   KTTTIAEVN-QYAGQQVTIGAWLANKRSSGKIVFLQLRDGTGFIQGVVEKANVSEEVFQR 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK++  E  L + G V                 ELS   ++++  A + P+     +E+ 
Sbjct: 61  AKTLTQETSLYVTGTVRIDERSPF-------GYELSVADLQVIQEAVDYPITP---KEHG 110

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +R L LR    H  +  R  II +         F++   PILT S+PEG  +  
Sbjct: 111 VEFLMDHRHLWLRSRRQHAIMKIRNEIIRATYEFFNDRGFVKVDAPILTGSAPEGTTELF 170

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                ++ ++  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 171 HTKYFDEDAY--LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMVEPEM 227

Query: 242 SFVEQDDILNTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAI 283
           +F E +D L   E  +  + +               + S    V   F R+ YD+AI
Sbjct: 228 AFYEFEDNLRLQEEYVSYLVQSVLERCRLELGRLGRDVSKLELVKPPFPRLTYDEAI 284



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 50/166 (30%), Gaps = 21/166 (12%)

Query: 401 FIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
               + +K              + G  +       +  D P +           +  PF 
Sbjct: 278 LTYDEAIKLLHEKGLTDIEWGDDFGAPHETAIAESF--DKPVF-----ITHYPTSLKPFY 330

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           M          N    +     DL+      EI  G  R H  E++ +      +  E  
Sbjct: 331 MQPD------PNRPDVVLCA--DLIAPEGYGEIIGGSERIHDYELLKRRLEEHHLPLEAY 382

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           E          + G  PH G   G++R V  + G ++VRE   FP 
Sbjct: 383 E----WYLDLRKYGSVPHSGFGLGLERTVAWICGVEHVRETIPFPR 424


>gi|319651309|ref|ZP_08005439.1| asparaginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317397089|gb|EFV77797.1| asparaginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 431

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 76/319 (23%), Positives = 120/319 (37%), Gaps = 34/319 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           V   V +  W+   R  G I FL +RD  G  Q   V A      F+ AKSV  E  + +
Sbjct: 13  VDQEVTIGAWIANKRSSGKIAFLQLRDGTGFIQGVVVKAEVPEEIFQGAKSVTQESSVYV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +                 E+    +E++  A + P+     +E+        R L L
Sbjct: 73  TGKIQKDERSPF-------GFEMLVTGLEVIHQAVDYPITP---KEHGTEFLMDNRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +       + F +   PILT S+PEG  +       ++ ++  
Sbjct: 123 RSRRQHAVMKIRNEIIRATYEFFNEQGFSKVDPPILTGSAPEGTSELFATKYFDEDAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F E DD L   
Sbjct: 181 LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFCEFDDNLKVQ 239

Query: 254 ENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRY---GTDKPDLRN 295
           E  +  + +      ++                  F RI YD+AI+     G D     +
Sbjct: 240 EEYVAHIVQSVLKNCSIELKTLGRDTEKLEKITAPFPRITYDEAIKFLQEKGFDDIQWGD 299

Query: 296 PIIMHNVTEHFVHSEFRVF 314
                + T      +  VF
Sbjct: 300 DFGAPHETAIAESYDKPVF 318



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 49/140 (35%), Gaps = 26/140 (18%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDL 484
           I  +  +  +I  +P             +  PF M         +   DL++ + +    
Sbjct: 309 IAESYDKPVFITHYP------------TSLKPFYMQPDPSREDVVLCADLIAPEGYG--- 353

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
                EI  G  R H  +++ Q      +  +  +          Q G  PH G   G++
Sbjct: 354 -----EIIGGSERIHDYDLLKQRLDEHKLDMDAYK----WYLELRQYGSVPHSGFGLGLE 404

Query: 545 RIVMLLLGAKNVREVSLFPM 564
           R V  + G ++VRE   FP 
Sbjct: 405 RTVAWISGVEHVRETIPFPR 424


>gi|170694747|ref|ZP_02885898.1| lysyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170140378|gb|EDT08555.1| lysyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 508

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 66/306 (21%), Positives = 118/306 (38%), Gaps = 30/306 (9%)

Query: 6   THSCGDLGV--SDVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL                  V ++G +   R  G   F  +RD  G  Q    P 
Sbjct: 43  THHAEDLQAQFEHTDKEALEANPLEVAIAGRMMLKRVMGKASFATVRDGSGQIQFFITPA 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +   +  I       +A  +      G++ +   ++ +LS +   PLP  
Sbjct: 103 DVGQETYDAFKKWDMGDI------VAARGVLFRTNKGELSVRCTELRLLSKSLR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + ++++ R++DL       K  V RTR I+S+R  M    F+E  TP+L     
Sbjct: 156 FHGLSDQEMKYRQRYVDLIVTPETRKTFVARTRAISSIRKFMADAGFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F           + L  AP+ Y + L+  GF+R F++   FR+E   S R   E
Sbjct: 216 GAAAKPFTTHHNALDMQMF-LRIAPELYLKRLVVGGFERVFEVNRNFRNEGV-SVRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T++           F R+    AI+
Sbjct: 274 FTMIEFYAAYTDYKWVMDFTEQLIRQAAIDALGTATITYQGRELDLAKPFHRLTITQAIQ 333

Query: 285 RYGTDK 290
           +Y    
Sbjct: 334 KYAPQY 339



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +  +      +    + + +D +     +++L   G EIA+G    +  
Sbjct: 378 LFEETAESQLWEPTYIIDYPLEVSPLA-RASDKVEGITERFELFITGREIANGFSELNDP 436

Query: 502 EVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      K+  +           RA + GMPP GG   GIDR+VM+L  + ++R
Sbjct: 437 EDQAARFRKQVDQKDAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLVMMLTDSPSIR 496

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 497 DVILFP 502


>gi|322389927|ref|ZP_08063467.1| lysine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321143363|gb|EFX38801.1| lysine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 496

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 64/354 (18%), Positives = 129/354 (36%), Gaps = 27/354 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             D+     ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSGQLKEKYSELDKEQLHDLNETAIIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGVEGEIMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +
Sbjct: 150 KFHGLSDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    +     Q     L  A + + + L+  G +  ++I   FR+E   +   P E
Sbjct: 210 GGAAAKPFITHHNAQNIDMVLRIATELHLKRLIVGGMECVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI++  E +++   +       +      I  ++  +R        
Sbjct: 269 FTSIEVYQAYADFHDIMDLTEGIIQHAAKAVHGDGPIDYQGTEIKINEPFKRVHMVDA-- 326

Query: 294 RNPIIMHNVTEHFVHSEFRVFSK-ILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                +  +T      +        L+      V     + G    AF +   E
Sbjct: 327 -----IKEITGVDFWQDMTFEEAVALANEKHVPVEKHYTEVGQIINAFFEEFVE 375



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      +  P       K N        +++L     E A+   
Sbjct: 365 IINAFFEEFVEET--LTQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     LQ F     +KE+ ++   G       A + GMPP GG+  GIDR+VMLL  
Sbjct: 423 ELNDPIDQLQRFEAQARAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTN 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 VTTIRDVLLFPTMK 496


>gi|81299641|ref|YP_399849.1| asparaginyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81168522|gb|ABB56862.1| asparaginyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 462

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 82/391 (20%), Positives = 144/391 (36%), Gaps = 55/391 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSE 68
           L     G  V + GW+   R      F+++ D   +   QVV   + A +E +AK + + 
Sbjct: 10  LSQGQPGQTVVVRGWIRTARQLKEFTFVEVNDGSCLKGIQVVLGQELADYEMLAKQLDTG 69

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + ++G +++  A+         ++EL A  +EI+  A+    P+  +R   E +R   
Sbjct: 70  AAIAVEGQLVASPAKG-------QRVELQAASVEIVGGADPEQYPLQKKRHSFEFLR-TI 121

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R ++L   +  R     ++        F+   TPI+TAS  EGA +    + ++ 
Sbjct: 122 AHLRPRTNSLGAVMRVRNAAATAIHDFFQERGFLWVHTPIITASDCEGAGELFTVTNLDL 181

Query: 189 G-------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                          F+   A      Q +  +MA  F   +   P FR E+  + R   
Sbjct: 182 DKLGQSQQAPDFEQDFFGKRAYLTVSGQLEAEIMALAFSNVYTFGPTFRAENSNTSRHLA 241

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS--------------------- 271
           EF+ ++ EM+F +    ++  E  L+ VF+  S+  +                       
Sbjct: 242 EFWMVEPEMAFCDLGGDMDLAEAFLKFVFQRVSDRCSEDLEFFNQRIDSEVLNRAETILN 301

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
           N+F R+ Y DAI            P+   +   +EH  +     F K L V         
Sbjct: 302 NDFERVSYTDAIALLEKADRSFDYPVAWGIDLQSEHERYLAEEYFRKPLIVYDYPREI-- 359

Query: 330 PAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                   R   D+    A     PG+  I 
Sbjct: 360 ---KAFYMRLNDDQKTVAAMDVLAPGIGEII 387



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 19/128 (14%)

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNH 499
           P   ++            F M          +D  ++ A   D++  G  EI  G  R  
Sbjct: 349 PLIVYD-----YPREIKAFYMR-------LNDDQKTVAAM--DVLAPGIGEIIGGSQREE 394

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             +V+ Q  +   +     E  +       + G  PH G   G +R+V  + G  N+R+V
Sbjct: 395 RLDVLKQRLAEANLP----EENYWWYLDLRRYGSVPHAGFGLGFERLVQFITGMGNIRDV 450

Query: 560 SLFPMSQN 567
             FP +  
Sbjct: 451 IPFPRTPQ 458


>gi|90020864|ref|YP_526691.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase
           [Saccharophagus degradans 2-40]
 gi|89950464|gb|ABD80479.1| lysyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 502

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 120/264 (45%), Gaps = 20/264 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +    V ++G + R R      F++++D  G  Q+    ++  F  AKS+    ++  
Sbjct: 59  LEEAAEVVSVAGRIIRNRG----AFMELQDGSGRIQLYVTKEARPF--AKSLDLGDIVGA 112

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++              G + +S  + ++L+ A   PLP        + +R++ R++DL
Sbjct: 113 KGVLHKSGK---------GDLYVSLDEYQLLTKALR-PLPDKFHGLADQEMRYRQRYVDL 162

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
                + K  V R+R++  +R  +  + F+E  TP+L T      AR F+          
Sbjct: 163 IANPEVRKTFVTRSRVVQFIRNYLNEKAFLEVETPMLQTIPGGASARPFITHHNALDMDM 222

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R ++I   FR+E   +   P EF  L+   ++ + +D+++
Sbjct: 223 Y-LRIAPELYLKRLVVGGFERVYEINRNFRNEGLSTRHNP-EFTMLEFYQAYADYNDLMD 280

Query: 252 TMENVLRGVFEEFSNGNTVSNNFL 275
             E++LR + +       V N   
Sbjct: 281 LTEDMLRNLAQTVLGDTKVVNTLP 304



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 7/160 (4%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                AR  +A+ LG+   + +    +     +E   E  ++         P       +
Sbjct: 344 DTLEAAR-EVAKNLGVQLKDSYGLGKV-QIEIFEKTVE-HRLIQPTFITEYPTEVSPLAR 400

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----Y 526
            +D       +++    G EIA+G    + +E   Q F      K+  ++          
Sbjct: 401 RSDSNPFVTDRFEFFVGGREIANGFSELNDAEDQAQRFKEQVAEKDAGDDEAMHYDADYV 460

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           RA + G+PP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 461 RALEYGLPPTAGEGIGIDRLVMLLTDSPSIRDVLLFPHMR 500


>gi|253577515|ref|ZP_04854828.1| asparaginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251843055|gb|EES71090.1| asparaginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 431

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 71/300 (23%), Positives = 119/300 (39%), Gaps = 31/300 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVL 71
             VG  V +  W++  R  G I FL +RD  G  Q V   +    E    AKS+  E  +
Sbjct: 12  EHVGEQVVIGSWLNNKRSSGKIQFLQLRDGTGYIQAVVVKNEVSEETWNKAKSLTQESSM 71

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G++                 E++   IEI+ + E  P+     +E+       +R L
Sbjct: 72  YVTGVIREEPRS-------KSGYEMTVSDIEIIQLTENYPITP---KEHGVDFLMDHRHL 121

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR       +V R  II +++       F     PILT +S EG  +       ++ ++
Sbjct: 122 WLRSSKQRAIMVIRAEIIRAVQEFFDQNGFTLVDPPILTPTSAEGTTNLFHTKYFDEDAY 181

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ EM+F + ++ L 
Sbjct: 182 --LTQSGQLYMEAA-AMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTDHEESLK 238

Query: 252 TMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
             EN +  V +               + S    +   F RI YD+AI    +   D+   
Sbjct: 239 IQENFITHVVQSVLKNCRAELEAVGRDVSKLEAIQAPFPRITYDEAIEYLHSQGFDIPWG 298



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 45/138 (32%), Gaps = 7/138 (5%)

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY-DLVCN-- 487
            F+  W  DF         ++ D        P G        D    +     D++    
Sbjct: 292 GFDIPWGEDFGAPHETAIAERYDKPVFITHYPAGIKAFYMKPDPNRPEVVLCADMIAPEG 351

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             EI  G  R     +M + F    +S E  +          + G  PH G   G++R V
Sbjct: 352 YGEIIGGSQRIDDPVLMEERFKEHNLSPETYQ----WYLDLRKYGSVPHSGFGLGLERTV 407

Query: 548 MLLLGAKNVREVSLFPMS 565
             + G  +VRE   FP  
Sbjct: 408 AWICGLDHVRETIPFPRM 425


>gi|78780096|ref|YP_398208.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|123755041|sp|Q318C3|SYK_PROM9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78713595|gb|ABB50772.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 512

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 68/321 (21%), Positives = 125/321 (38%), Gaps = 18/321 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVM 78
           V L+G V   R  G I F  I D  G  Q+  +    +   E  K +  E +  I  +  
Sbjct: 53  VSLAGRVMAKRVMGKIAFFTISDQEGQIQLYLDKRMINCNLENQKLLSFEDIKEIVDIGD 112

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                        G++ +  +K E+LS + + PLP           R++ R+LDL  +  
Sbjct: 113 WIGVYGTIKKTNKGELSIKVEKWEMLSKSLQ-PLPDKWHGLTDIEKRYRQRYLDLIVNPH 171

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQ 196
            KN+ K R + I+ +R  +   NF+E  TPIL + +    AR F+          Y L  
Sbjct: 172 SKNVFKTRAKCISFIRQWLDNRNFLEIETPILQSEAGGAEARPFITHHNTLDIPLY-LRI 230

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + ++  GF++ +++   FR+E   +   P EF  +++  +F    D++N  E +
Sbjct: 231 ATELHLKRMVVGGFEKVYELGRIFRNEGISTKHNP-EFTSVEIYQAFSNYVDMMNLTEEL 289

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           ++ +         ++     I +     R           I M ++ + +   +F  FS 
Sbjct: 290 IKDIVFNVCGSLVINYQNKEIDFSKPWSR-----------ISMKDIVKKYTGIDFDSFSG 338

Query: 317 ILSVNPGYEVWAIPAKGGGGN 337
                               N
Sbjct: 339 DFQSAKQAVKSINVEFSNKVN 359



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 58/158 (36%), Gaps = 27/158 (17%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
            +      N + ++   +     E  +++D+P               +P   P    + +
Sbjct: 358 VNSMGRLLNEVFEQ--KVESELIEPTFVIDYP------------VEISPLARPHLDNKEM 403

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
                      +++L   G E+A+            +        ++  ++         
Sbjct: 404 ---------VQRFELFIVGRELANAFSELIDPVDQRERMQLQQSLRDEGDHEAHCIDEDF 454

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A + GMPP GG+  GIDR++ML+  + ++R+V  FP
Sbjct: 455 LNALEIGMPPTGGLGIGIDRLIMLITNSPSIRDVIPFP 492


>gi|195130335|ref|XP_002009607.1| GI15452 [Drosophila mojavensis]
 gi|193908057|gb|EDW06924.1| GI15452 [Drosophila mojavensis]
          Length = 554

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 86/543 (15%), Positives = 165/543 (30%), Gaps = 111/543 (20%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
            ++G +H +R  G  +IF D+R      QV+A+  S   E A     +      G ++  
Sbjct: 112 SVAGRIHAIRESGAKLIFYDLRGEGVKLQVMASAKSYKSEAA--FEQDTAKLRRGDIIGV 169

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLH 139
           +          G++ +   ++++LS      LP        +  R++ R+LDL   + + 
Sbjct: 170 NG--HPGKTKKGELSIMPTELKLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNNKVR 226

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
           +N   R +II+ +R  +    F+E  TP++   +    A+ F+      +   + +  AP
Sbjct: 227 ENFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNELKMDLF-MRIAP 285

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++++  G DR ++I   FR+E       P EF   +  M++    D  + +     
Sbjct: 286 ELYHKMVVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYA---DYYDLI----- 336

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
                            ++     +  +G+ K             ++       V  +I 
Sbjct: 337 -------------EITEQMLSGMVMAIHGSYKI------------KYHPDGPEGVEQEID 371

Query: 319 SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKH 378
              P   V  I          F                                 P A  
Sbjct: 372 FTPPFKRVSMIKTLEEKLQVKF---------------------------------PSADT 398

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
            N         +L  +           P                    I   C    +I 
Sbjct: 399 FNSPAANEFLSQLCAKH----QVECPPPRTTARLLDKLVGEF------IEETCINPTFI- 447

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
                             +P  M                   +++L     E+ +     
Sbjct: 448 ----------------CEHPQIMSPLAKYHRSVP----GLTERFELFVAKKEVCNAYTEL 487

Query: 499 HMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +   V  + F      K   ++           A + G+PP GG   GIDR+ M L  + 
Sbjct: 488 NDPVVQRERFEQQAGDKAAGDDEAQMVDENFCTALEYGLPPTGGWGMGIDRLAMFLTDSN 547

Query: 555 NVR 557
            ++
Sbjct: 548 TIK 550


>gi|167462236|ref|ZP_02327325.1| asparaginyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 432

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 73/302 (24%), Positives = 119/302 (39%), Gaps = 32/302 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              VG  VR+  W+H  R  G I FL +RD  G  Q   V +  +   ++ A  +  E  
Sbjct: 11  KHHVGQSVRIGCWLHNKRSSGKIQFLQLRDGSGFIQGVVVKSEVNEQVWDAASKLTQESS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G V                 EL+   +EI+ +  E P+     +E+       +R 
Sbjct: 71  LYVTGTVREDDRSQS-------GFELTVDHVEIIQITHEYPVTP---KEHGVDFLMDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +V R++II +++       F    TPILT SS EG  +       ++ +
Sbjct: 121 LWLRAPRQRAIMVIRSQIIRAVQEYFDERGFHLVDTPILTPSSCEGTTNLFHTKYFDEDA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A    R +   P FR E  ++ R   EF+ ++ EM+FVE ++ L
Sbjct: 181 Y--LTQSGQLYIEAA-AMALGRVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEHEESL 237

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRYGTD-KPDLR 294
              E  +  + +                          F RI YD+A+     +   D +
Sbjct: 238 RIQEEFVAHIIKSVLTHCQKELKVLGRDTSKLEACVTPFPRIAYDEAVEFLHENGFEDFK 297

Query: 295 NP 296
             
Sbjct: 298 WG 299



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 52/152 (34%), Gaps = 8/152 (5%)

Query: 417 RNHIAQELGIINCNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           R    + +  ++ N FE F W  DF         +  +        P          D  
Sbjct: 278 RIAYDEAVEFLHENGFEDFKWGEDFGAPHETAIAEAYNKPVFITHYPTEIKAFYMKPDPN 337

Query: 476 SIKAFQY-DLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
             +     DL+      EI  G  R    E+M Q F   G+S    E  +       + G
Sbjct: 338 RPEVVLCADLIAPEGYGEIIGGSQRIDDPELMEQRFKEHGLS----EEAYQWYMDLRRYG 393

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             PH G   G++R V  + G  +VRE   FP 
Sbjct: 394 TVPHCGFGLGLERTVAWICGLDHVRETIPFPR 425


>gi|187927988|ref|YP_001898475.1| lysyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|238691787|sp|B2U8U9|SYK_RALPJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|187724878|gb|ACD26043.1| lysyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 514

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 64/308 (20%), Positives = 126/308 (40%), Gaps = 30/308 (9%)

Query: 6   THSCGDLGVS--DVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH  GDL     ++           V ++G +   R  G   F  ++D     Q   + D
Sbjct: 49  THHAGDLQAKYRELEQTALEAEPVQVAIAGRMMLKRVMGKASFATVQDATDRIQFYISRD 108

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +   ++  S +   +  I       +A        TG++ ++  ++ +LS +   PLP  
Sbjct: 109 AVGEDVYASFKKWDLGDI------VAARGTLMKTKTGELSVAVTELRLLSKSLR-PLPGD 161

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 +  +++ R++DL      ++  + RT+ + S+R  M    F+E  TP+L     
Sbjct: 162 YYGLADQEQKYRQRYVDLIVSKETRDTFRARTKAMASLRNFMAGNGFMEVETPMLHPIPG 221

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          + L  AP+ Y + L+  GF+R ++I   FR+E   S R   E
Sbjct: 222 GAAAKPFITHHNALDMQMF-LRIAPELYLKRLIVGGFERVYEINRNFRNEGV-SPRHNPE 279

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    + S   T++           F R+    AI+
Sbjct: 280 FTMMEFYAAYTDYRWLMDFTEQLIRQAAIDASGTATLTYQGRELDLAKPFHRLTICQAIQ 339

Query: 285 RYGTDKPD 292
           +Y     D
Sbjct: 340 KYAPQYTD 347



 Score =  107 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 25/136 (18%)

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
           +E  +I+D+P                            +G+D L     +++L   G EI
Sbjct: 394 WEPTFIIDYP---------------------VEVSPLARGSDTLPGITERFELFITGREI 432

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIV 547
           A+G    +  E   + F      K+  +           RA + GMPP GG   GIDR+V
Sbjct: 433 ANGFSELNDPEDQAERFRKQVEQKDAGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLV 492

Query: 548 MLLLGAKNVREVSLFP 563
           MLL  + N+R+V LFP
Sbjct: 493 MLLTDSPNIRDVILFP 508


>gi|74316911|ref|YP_314651.1| lysyl-tRNA synthetase, class-2 [Thiobacillus denitrificans ATCC
           25259]
 gi|123745516|sp|Q3SKD9|SYK_THIDA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|74056406|gb|AAZ96846.1| lysyl-tRNA synthetase, class-2 [Thiobacillus denitrificans ATCC
           25259]
          Length = 501

 Score =  197 bits (500), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 63/281 (22%), Positives = 123/281 (43%), Gaps = 20/281 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+L+G +   R  G   F  ++D  G  QV  + D    +  ++ +   +    G  +  
Sbjct: 65  VQLAGRMMLKRVMGKASFATLQDMSGRIQVYVSNDLTGLDAHEAFKRWDL----GDFVGV 120

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           S      N   G++ + A+ + +LS A   PLP        +  +++ R+LDL  +   +
Sbjct: 121 SGTLFKTN--KGELTIQAKSVRLLSKALR-PLPEKFHGLADQEQKYRQRYLDLITNDDAR 177

Query: 141 -NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
              V+R++II ++R  M    F+E  TP++        A+ F+          + L  AP
Sbjct: 178 STFVRRSKIIQAIREFMTGHGFLEVETPMMHPIPGGAAAKPFVTHHNALDMELF-LRIAP 236

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF++ F+I   FR+E   +   P EF  ++   ++ E   +++  E ++R
Sbjct: 237 ELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNP-EFTMMEFYEAYREYRYLMDFTEALIR 295

Query: 259 GVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDK 290
                 +   T+S           F R+   +A+R+Y  + 
Sbjct: 296 HTAVAATGSTTISYQGSTIELGTPFDRLTIVEAVRKYHPEY 336



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YR 527
           +D       +++L   G E+A+G    + +E   + F     +KE  +           R
Sbjct: 400 SDTQPEITERFELFITGREMANGFSELNDAEDQAERFMEQVRAKEAGDEEAMHYDADFIR 459

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP GG   GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 460 ALEHGLPPTGGCGIGIDRLVMLLTDSPSIRDVILFPQMRR 499


>gi|194016905|ref|ZP_03055518.1| asparaginyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194011511|gb|EDW21080.1| asparaginyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 431

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 82/321 (25%), Positives = 129/321 (40%), Gaps = 34/321 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVL 71
             V   V +  W+   R  G I FL +RD  G  Q   V A  +   F++AKSV  E  +
Sbjct: 11  KHVDEDVTIGAWIANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEEEVFKLAKSVTQETSV 70

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G V       +         EL  + IE++  A + P+     +E+       +R L
Sbjct: 71  YVTGQVTKDERSPL-------GFELQVKSIEVIHEATDYPITP---KEHGTEFLMDHRHL 120

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR    H  +  R  II +       E F++   PILT S+PEG  +       ++ ++
Sbjct: 121 WLRSKKQHAIMKIRNEIIRATYEFFHQEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY 180

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L 
Sbjct: 181 --LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFNENLE 237

Query: 252 TMENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRY---GTDKPDL 293
             EN +  V +       V  +               F RI YD+AI+     G D  + 
Sbjct: 238 YQENYVTHVVQSVLENCKVELHTLGRDTAKLENIKTPFPRITYDEAIKFLQEKGFDDIEW 297

Query: 294 RNPIIMHNVTEHFVHSEFRVF 314
            +     + T      +  VF
Sbjct: 298 GDDFGAPHETAIAESYDKPVF 318



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 49/140 (35%), Gaps = 26/140 (18%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDL 484
           I  +  +  +I  +P             +  PF M         +   DL++ + +    
Sbjct: 309 IAESYDKPVFITHYP------------TSLKPFYMQPAPDRDDVVLCADLIAPEGYG--- 353

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
                EI  G  R H  E++       G+     +  +       Q G  PH G   G++
Sbjct: 354 -----EIIGGSERVHDLELLEARLKEHGLD----QETYKWYTELRQYGSVPHSGFGLGLE 404

Query: 545 RIVMLLLGAKNVREVSLFPM 564
           R V  + GA +VRE   FP 
Sbjct: 405 RTVAWISGAPHVRETIPFPR 424


>gi|295703515|ref|YP_003596590.1| asparaginyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294801174|gb|ADF38240.1| asparaginyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 430

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 74/292 (25%), Positives = 116/292 (39%), Gaps = 31/292 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              VG  V +  W+   R  G I FL +RD  G  Q   V A  +   F++AKS+  E  
Sbjct: 9   SKHVGKEVTIGAWLANKRSSGKIAFLQLRDGSGFMQGVVVKAEVEEETFKLAKSMTQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G+V                 EL+   +E++  A + P+     +E+        R 
Sbjct: 69  LYVTGIVREDERSPF-------GYELTVTSLEVIHEAVDYPITP---KEHGTEFLMDNRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II +         F +   PILT S+PEG  +       ++ +
Sbjct: 119 LWLRSKRQHAVMKVRNEIIRATYEFFNENGFTKVDPPILTGSAPEGTTELFHTKYFDEDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F + +D L
Sbjct: 179 Y--LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYQFEDNL 235

Query: 251 NTMENVLRGVFEEF---------------SNGNTVSNNFLRICYDDAIRRYG 287
              E  +  V +                 S    +   F RI YDDA++   
Sbjct: 236 KVQEEYVSHVVQSVLTNCKLELNVLGRDTSKLEQIKAPFPRISYDDALKFLH 287



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 53/171 (30%), Gaps = 31/171 (18%)

Query: 401 FIAGDPLKFCSFAADARNHIAQELGI-----INCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
               D LKF             + G      I  +  +  +I  +P             +
Sbjct: 277 ISYDDALKFLHEKGFTDIQWGDDFGAPHETAIAESYDKPVFITHYP------------TS 324

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGI 513
             PF M           D++       DL+      EI  G  R H  E++ Q      +
Sbjct: 325 LKPFYMQPDPT----NEDVVLCA----DLIAPEGYGEIIGGSERIHDQELLAQRVEEHKL 376

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                   +       + G  PH G   G++R V  + G ++VRE   FP 
Sbjct: 377 DT----ETYKWYLELRKYGSVPHSGFGLGLERTVAWISGVEHVRETIPFPR 423


>gi|323526608|ref|YP_004228761.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323383610|gb|ADX55701.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 508

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 65/306 (21%), Positives = 118/306 (38%), Gaps = 30/306 (9%)

Query: 6   THSCGDLGV--SDVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH   DL                  V ++G +   R  G   F  +RD  G  Q    P 
Sbjct: 43  THHAEDLQAQFEHTDKETLEANPLEVAIAGRMMLKRVMGKASFATVRDGSGQIQFFITPA 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               +   + +   +  I       +A  +      G++ +   ++ +LS +   PLP  
Sbjct: 103 DVGQDTYDAFKKWDMGDI------VAARGVLFRTNKGELSVRCTELRLLSKSLR-PLPDK 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + ++++ R++DL       K  V RT+ I+S+R  M    F+E  TP+L     
Sbjct: 156 FHGLSDQEMKYRQRYVDLIVTPETRKTFVARTKAISSIRKFMADAGFMEVETPMLHPIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F           + L  AP+ Y + L+  GF+R F+I   FR+E   S R   E
Sbjct: 216 GAAAKPFTTHHNALDMQMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SVRHNPE 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIR 284
           F  ++   ++ +   +++  E ++R    +     T++           F R+    AI+
Sbjct: 274 FTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTATITYQGRELDLAKPFHRLTITQAIQ 333

Query: 285 RYGTDK 290
           +Y    
Sbjct: 334 KYAPQY 339



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +  +     P       + +D ++    +++L   G EIA+G    +  
Sbjct: 378 LFEETAESQLWEPTY-IIDYPVEVSPLARASDKVAGITERFELFITGREIANGFSELNDP 436

Query: 502 EVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      K+  +           RA + GMPP GG   GIDR+VM+L  + ++R
Sbjct: 437 EDQAARFKKQVDQKDAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLVMMLTDSPSIR 496

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 497 DVILFP 502


>gi|189485651|ref|YP_001956592.1| lysyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287610|dbj|BAG14131.1| lysyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 489

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 70/336 (20%), Positives = 136/336 (40%), Gaps = 32/336 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
                   V+ +G V   R  G   FLDI+D     Q+    D    E  K  +S   + 
Sbjct: 57  REQLANIKVKAAGRVMTYRNMGRAAFLDIKDGLAKIQIYIRADKMGEEQYKFFKSMVDIS 116

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
               V     E I     T ++ +  +K  +L+ A   PLP          IR + R+LD
Sbjct: 117 DIIAV-----EGIPFRTRTNELSIMVEKWTMLTKA-FRPLPEKWHGLKDIEIRCRQRYLD 170

Query: 133 LRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +  +    VKR+ +I+++R ++    FIE  TPIL + +    AR F+        +
Sbjct: 171 LIANSEVKDIFVKRSMVISAVRHKLEELGFIEVETPILQSLAGGANARPFITHHNALDIN 230

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L  AP+ + + L+  G DR F+I   FR+E    +  P EF  L++  ++ + +D++
Sbjct: 231 LF-LRIAPELFLKRLVVGGLDRVFEIGRNFRNEGIDKNHNP-EFTMLELYQAYADYNDMM 288

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           +  E +++   ++    + ++  F R                    + M ++ + +   +
Sbjct: 289 DMSEILIKAAAKKVG--SALNLEFTR--------------------VKMFDLIKKYAGLD 326

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
              + +   +    +   +       +R   D++ E
Sbjct: 327 LLPYVESGKMFEQVKHLNLDLAEDATDRKILDQLFE 362



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 25/142 (17%)

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            N     ++MD+P              ++P +  +     +         A +++L  +G
Sbjct: 367 PNLKNPTFVMDYP------------AVYSPLSKVKFDQPEI---------AERFELYISG 405

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGID 544
            EI +     +  E+    F+    +K   +++          A + G+PP GG+  GID
Sbjct: 406 IEIGNAYSELNDPELQKIRFTQQMKAKNKGDDKVMPYDEDFIFALEQGLPPTGGLGIGID 465

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VM+L G +++REV +FP  +
Sbjct: 466 RLVMVLTGVESIREVIIFPAMR 487


>gi|116873331|ref|YP_850112.1| asparaginyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123461236|sp|A0AK01|SYN_LISW6 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116742209|emb|CAK21333.1| asparaginyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 430

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 31/294 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDMFASAKALTQETSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +             E++   +E++S + + P+     +E+       +R L L
Sbjct: 72  TGTINEDTRSPF-------GYEMAVSGVEVISESHDYPITP---KEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +  H  +  R  II +       E F++   PILT S+PEG  +        + +F  
Sbjct: 122 RSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L   
Sbjct: 180 LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQVQ 238

Query: 254 ENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRYGTDKPD 292
           EN +  + +   +   +                  F RI Y +AI R      D
Sbjct: 239 ENYVAYLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIERLHELGFD 292



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 41/122 (33%), Gaps = 10/122 (8%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E          A  PF MP+    +        I    Y       EI  G  R H  E
Sbjct: 312 FEKPVFITHYPKAIKPFYMPEDPENNQVVLCADMIAPEGY------GEIIGGSERIHDLE 365

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +     +  +     +  +       + G  PH G   G++R V  + G ++VRE   F
Sbjct: 366 TLQARMEDFDLD----QEAYSWYLDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPF 421

Query: 563 PM 564
           P 
Sbjct: 422 PR 423


>gi|302338751|ref|YP_003803957.1| asparaginyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301635936|gb|ADK81363.1| asparaginyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 462

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 68/384 (17%), Positives = 128/384 (33%), Gaps = 52/384 (13%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---I 61
           RTH    +     G  V + GWV   R    + FL++ D      +    D A  E   +
Sbjct: 3   RTHRIVTILSMAPGERVTVYGWVRTKRDSKNVCFLELSDGSSFRNLQVIVDKAEEEKSPV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             S+ +   + + G + +   +  +       IEL A  ++++  A     P+  +R   
Sbjct: 63  IDSITTGASVEVTGTLAASPGKNQS-------IELQADSLKLIGEAPAESYPLQKKRHSF 115

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +   L  R +T       R ++  ++      + FI   TP+++ S  EGA +  
Sbjct: 116 EFLR-EIAHLRPRTNTFGAVTRVRNQLSWAVHRFFQEQGFIYVHTPLISTSDCEGAGEMF 174

Query: 182 VPSRVNQG-------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDP 225
             + +                 F+    +     Q +  + AS F   +   P FR E+ 
Sbjct: 175 QVTTLPLEKVPLKEGKIDYSQDFFGKRASLTVSGQLEAEIYASAFSDVYTFGPTFRAENS 234

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV--------------- 270
            + R   EF+ ++ EM+F +    +   E  L+ +        +                
Sbjct: 235 NTTRHLAEFWMIEPEMAFCDLAGNMELAEAFLKNILSSVLEHCSEDMKFFNQWVEKGIID 294

Query: 271 ------SNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
                    F  + Y +A++   T K +   P+   +     + SE   F          
Sbjct: 295 SLEKVIDTPFTHMSYTEAVQALKTGKTNFEFPVEWGS----DLQSEHERFLTETVCKGPV 350

Query: 325 EVWAIPAKGGGGNRAFCDRMNEWA 348
            V   P +         D     A
Sbjct: 351 IVTDYPKEIKAFYMKLNDDGKSVA 374



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 4/97 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +K ND     A    LV    EI  G  R     V+ Q   + G++       +      
Sbjct: 364 MKLNDDGKSVAAMDVLVPRLGEIIGGSERESRLSVLEQRIHDTGLNP----EEYWWYLDL 419

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            + G  PH G   G +R++  + G +N+R+V  FP +
Sbjct: 420 RRFGTVPHSGFGLGFERLIQYVTGMQNIRDVIPFPRT 456


>gi|291514973|emb|CBK64183.1| Lysyl-tRNA synthetase (class II) [Alistipes shahii WAL 8301]
          Length = 572

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 68/320 (21%), Positives = 120/320 (37%), Gaps = 19/320 (5%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             VR++G +   R  G   F +++DH G  QV    D  C E   ++ +     +  +  
Sbjct: 53  QDVRIAGRIMSRRIMGSASFFELQDHTGRIQVYIRRDDICPEGDPTLYNTVFKKLLDIGD 112

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------YPESIRFKYRFLD 132
               E    +  TG++ +  +K  +LS +      V  +            +R++ R+LD
Sbjct: 113 FIGVEGFVFHTNTGELSVHCRKFTVLSKSIRPLPVVKEKDGKTFDAFTDPEVRYRQRYLD 172

Query: 133 LRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   K   V+R RI+ +MR       +IE  TPIL        AR F+         
Sbjct: 173 LIVNPQVKETFVRRARIMATMREFFNERGYIEVETPILQPIPGGASARPFITHHNSLDID 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  GFD  ++    FR+E       P EF  +++ +++ +   ++
Sbjct: 233 LY-LRIATELYLKKLIVGGFDGVYEFGKNFRNEGMDRTHNP-EFTCMEIYVAYKDYLWMM 290

Query: 251 NTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
              E +L  V    +                 F R+   DAIR         R+   +  
Sbjct: 291 EFTEQMLERVAMAVNGTTELTIDGKPISFKAPFRRLTMTDAIREKTGYDITGRSEEELRE 350

Query: 302 VTEHFVHSEFRVFSKILSVN 321
             +         F K   ++
Sbjct: 351 ACKQLNVEVDETFGKGKLID 370



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 4/93 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGM 533
              +++L  NG E+ +     +     L+ F       E  ++          RA + GM
Sbjct: 407 LTERFELFVNGKELCNAYSELNDPIDQLERFQEQLRLSEKGDDEAMFIDMDFVRALEYGM 466

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P   G+  GIDR+ M +    ++++V  FP  +
Sbjct: 467 PTCSGMGIGIDRLTMFMTDQSSIQDVLFFPQMR 499


>gi|268325663|emb|CBH39251.1| aspartyl-tRNA synthetase [uncultured archaeon]
          Length = 437

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 82/342 (23%), Positives = 147/342 (42%), Gaps = 26/342 (7%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
               ++  ++ G  V ++GWVH  R  GG+ FL +RD  G  Q+         E+   V+
Sbjct: 14  KYTNEITAANAGERVSVAGWVHEKRDLGGVFFLIVRDISGFAQITLPKKKVEPELFDRVK 73

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIR 125
                     V+    E  +        E+  Q++++LS A ++ PL   G+       R
Sbjct: 74  R----VPRESVVVVEGEVKSEKKAPNGYEIIPQQMDVLSEASQVLPLDTTGKVGAELDTR 129

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              RF+DLR +      + R+  + ++R        IE +TP + +++ EG       S 
Sbjct: 130 LDARFMDLRTERTKHIFMIRSLALKAIRDFFDERGLIEINTPKIVSAATEGGTALFPISY 189

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             + +F  L Q+PQ YKQ+LMASGFDR ++IAP FR E+  + +   E   +D+E++FV 
Sbjct: 190 FEREAF--LNQSPQLYKQILMASGFDRVYEIAPIFRAEEHDTTKHLNEATSVDVELAFVS 247

Query: 246 QDDILNTMENVLRGVFEEFSNG----------NTVSNNFLRICYDDAIR---------RY 286
             +++  +E ++  ++ +  +              +  F RI Y +AI           +
Sbjct: 248 DKEVMALLEELIASIYTKVVDYPGLAKLKVKLEVPAIPFRRITYAEAIELLSGEGEQIEW 307

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           G D        +   + E +  +++    K     P  E   
Sbjct: 308 GEDIGTSAERTLGKIIGELYFITDWPCAIKPFYAQPAAEGIC 349



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 26/139 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           E  +I D+P             A  PF                      +DL+    E++
Sbjct: 325 ELYFITDWP------------CAIKPFYAQPAA----------EGICNAFDLMHPRLELS 362

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  E++ +     G+S     + F     AF+ GMPPH G   G++R++M +L 
Sbjct: 363 SGSQRVHSYELLKRQIETKGLSA----DSFEFYLDAFRYGMPPHAGWGLGVERLLMSMLE 418

Query: 553 AKNVREVSLFPMSQNFCDL 571
            +N+R+V LFP  +     
Sbjct: 419 VENIRDVVLFPRDRRRLTP 437


>gi|148241213|ref|YP_001226370.1| lysyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|166230597|sp|A5GQ58|SYK_SYNR3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|147849523|emb|CAK27017.1| Lysyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 502

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 63/357 (17%), Positives = 131/357 (36%), Gaps = 32/357 (8%)

Query: 6   THSCGDLGVSDV----GSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           +H   +L  +      G      V ++G V   R  G + F  + D  G  Q+       
Sbjct: 30  SHRTAELQQAHADLPNGEERDVSVAIAGRVMTRRVMGKLAFFTLADETGPIQLFLEK--- 86

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
              +  + +    L   G  +         +   G++ + A + ++LS + + PLP    
Sbjct: 87  -AALGDAFKQITSLVDAGDWIGVKGTLRRTD--RGELSVKAAQWQMLSKSLQ-PLPDKWH 142

Query: 118 REYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
                  R++ R+LDL           +R ++++ +R  +   +F+E  TP+L +     
Sbjct: 143 GLADVEKRYRQRYLDLIVSPDTRDTFRRRAQLVSGIRRWLDERDFLEIETPVLQSEPGGA 202

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F             L  A + + + L+  GF+R +++   FR+E   +   P EF 
Sbjct: 203 DARPFETHHNALDLPL-TLRIATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP-EFT 260

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            +++  +F + +D+++  E ++  V ++      ++     I      RR          
Sbjct: 261 SVEIYQAFADYNDMMDLTEELISSVTQQVCGSTLINYQGTEINLAPGWRR---------- 310

Query: 296 PIIMHNVTEHFVHSEFRVFS--KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
              MH + +     +F  FS  +  +     +    PA      R   +   +    
Sbjct: 311 -ATMHELVKEATGLDFAGFSSREDAAAAMEAKGLQTPALADSVGRLLNEAFEQAVEE 366



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 62/193 (32%), Gaps = 38/193 (19%)

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN-HIAQELGIINCNCFE---------F 434
           E ++    +   D   F + +       A   +   +A  +G +    FE          
Sbjct: 315 ELVKEATGL---DFAGFSSREDAAAAMEAKGLQTPALADSVGRLLNEAFEQAVEETLIQP 371

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            ++ D+P      E   +  +H                        +++L   G E  + 
Sbjct: 372 TFVTDYPV-----EISPLARSHR----------------SKPGLVERFELFIVGREHGNA 410

Query: 495 GIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
                      Q        +       +        A + GMPP GG+  GIDR+VMLL
Sbjct: 411 FSELTDPVDQRQRLEAQQERRAAGDLEAQRVDEDFLNALEVGMPPTGGLGIGIDRLVMLL 470

Query: 551 LGAKNVREVSLFP 563
             + ++R+V  FP
Sbjct: 471 TDSPSIRDVIAFP 483


>gi|82703393|ref|YP_412959.1| lysyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|82411458|gb|ABB75567.1| lysyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 507

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 67/302 (22%), Positives = 126/302 (41%), Gaps = 22/302 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + Y  HS   L    V   VR++G +   R  G   F  ++D  G  Q+    D A    
Sbjct: 54  NTYSEHSTETLEAEPV--PVRVAGRMVLKRVMGKASFATLQDMRGRIQLYIAKDVAGDSA 111

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             + R   +  I G      AE       TG++ +    + +L+ +   PLP        
Sbjct: 112 YGAFRHYDLGDILG------AEGTLFRTRTGELSVRVTNLRLLTKSLR-PLPEKFHGLSD 164

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  +++ R+LDL  +   +   + R+RII ++R  ++   ++E  TP++        AR 
Sbjct: 165 QEQKYRQRYLDLITNESSRKVFIARSRIIQAIREFLVGHGYLEVETPMMHPIPGGAAARP 224

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  G ++ F+I   FR+E   +   P EF  L+ 
Sbjct: 225 FITHHNALDMQLY-LRIAPELYLKRLVIGGLEKVFEINRSFRNEGISTRHNP-EFTMLEF 282

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDK 290
             ++ +   +++  E +LR V  +     + +           F R+   +AIR++  + 
Sbjct: 283 YEAYRDYAYLMDLTEALLREVTLKVLGAASFTYQERELDLAQPFARLTITEAIRKFHPEY 342

Query: 291 PD 292
            +
Sbjct: 343 TE 344



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 65/194 (33%), Gaps = 32/194 (16%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIA-----GDPLKFCSFAADARNHIAQELGIINCNCFE 433
           +     +      + Q  D  F I      G P K        +  +  E        F+
Sbjct: 331 ITEAIRKFHPEYTEAQLDDRAFLIDKLQELGIPYKPGDGVGGLQLTLFDE--TTEHLLFD 388

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             +I+D+P                            + ND       +++L   G EIA+
Sbjct: 389 PTFIVDYP---------------------AEVSPLARRNDRNPAITDRFELYIAGREIAN 427

Query: 494 GGIRNHMSEVM----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           G    +  E      L+             +      RA + G+PP  G   GIDR+VML
Sbjct: 428 GFSELNDPEDQAVRFLEQARAKEAGDAEAMHYDADYIRALEYGLPPTAGEGIGIDRLVML 487

Query: 550 LLGAKNVREVSLFP 563
           L  + ++R+V LFP
Sbjct: 488 LTNSPSIRDVILFP 501


>gi|225017738|ref|ZP_03706930.1| hypothetical protein CLOSTMETH_01667 [Clostridium methylpentosum
           DSM 5476]
 gi|224949531|gb|EEG30740.1| hypothetical protein CLOSTMETH_01667 [Clostridium methylpentosum
           DSM 5476]
          Length = 464

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 69/355 (19%), Positives = 119/355 (33%), Gaps = 50/355 (14%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           C  L     G+ V + GWV  +R    + F+++ D      V    + +     K V   
Sbjct: 13  CAQLD----GTSVTVCGWVKTIRDSKALGFIELNDGSCFKGVQIVFEESNLSNFKEVTKY 68

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V    G  +  + + I         E+ A +I +L  A     P+  +R   E +R   
Sbjct: 69  NV----GSALIVTGKLIVTPNARQPFEIHADEI-VLEGASTSDYPLQKKRHSLEFLR-TI 122

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +T       R+    ++        F+   TPI+T+S  EGA +    + ++ 
Sbjct: 123 AHLRPRTNTFSAVFRVRSAAAFAIHKFFNERGFVYSHTPIITSSDAEGAGEMFRVTTLDP 182

Query: 189 G--------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+  P +     Q +   MA  F + +   P FR E   + R  
Sbjct: 183 KAPPLNEDGTVDFTQDFFEKPTSLTVSGQLEAECMAMAFGKTYTFGPTFRAEKSNTPRHA 242

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------- 275
            EF+ ++ E++F +  D ++   ++++ V             F                 
Sbjct: 243 AEFWMIEPEIAFADLQDDMDLARDMIKSVLSYVLETCPEDMAFFNAHYDKGLIERLNSLI 302

Query: 276 -----RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
                 I Y +AI      K     P+       TEH       VF K + V   
Sbjct: 303 ESDFGHITYTEAIEILEKHKEKFEYPVHWGVDLQTEHERFLTEEVFKKPIFVTDY 357



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 55/150 (36%), Gaps = 26/150 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +  ++ D+P     +E K        F M          +D  ++ A  
Sbjct: 339 HERFLTEEVFKKPIFVTDYP-----KEIK-------AFYMR-------LNDDGKTVAAV- 378

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            D++  G  EI  G  R    +V+L     +G+        +       + G   H G  
Sbjct: 379 -DMLVPGVGEIIGGSQREERLDVLLARMEELGLQP----EDYSWYLDLRRYGGSKHAGFG 433

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R++M + G  N+R++  FP +    +
Sbjct: 434 LGFERLIMYMTGVSNIRDMLPFPRTTGSAE 463


>gi|322411385|gb|EFY02293.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 497

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 61/325 (18%), Positives = 123/325 (37%), Gaps = 18/325 (5%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   +  DL   ++     ++G +   R  G + F  ++D  G  Q+    DS   + 
Sbjct: 46  EKYSDKTKEDLH--ELNKTAIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDSVGEDN 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +   +    G  +    E +  ++  G++ + A K+  LS +   PLP        
Sbjct: 104 YEIFKKADL----GDFLGVEGEIMRTDM--GELSIKATKLTHLSKSLR-PLPEKFHGLTD 156

Query: 122 ESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               ++ R LDL  +       V R+++I+ +R  +   +F+E  TP+L   +   A   
Sbjct: 157 IETIYRKRHLDLISNRESFNRFVTRSKMISEIRRYLDGLDFLEVETPVLHNEAGGAAARP 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            V     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++ 
Sbjct: 217 FVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVY 275

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ +  DI+N  E +++   +       +      I  ++  +R             + 
Sbjct: 276 QAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFKRVHMVDA-------IK 328

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYE 325
            VT      E  V   I        
Sbjct: 329 EVTGVDFWPEMTVEEAIALAKEKQV 353



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      F  P       K N   +    +++L     E A+   
Sbjct: 365 IINAFFEEFVEET--LIQPTFVFGHPVEVSPLAKKNPKDARFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 423 ELNDPIDQLSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTN 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 TTTIRDVLLFPTMK 496


>gi|294788454|ref|ZP_06753697.1| lysine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294483885|gb|EFG31569.1| lysine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 504

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 64/303 (21%), Positives = 128/303 (42%), Gaps = 23/303 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   S  +L   ++   V+++G +   R  G   F  ++D  G  Q+  N      +I
Sbjct: 51  EQYDNTSKEELDPQNI--PVKIAGRMMLKRQMGKATFATVQDVSGSIQLYLNNKGVSQDI 108

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                   +  I G      A         G++ +   +I +LS +   PLP   +    
Sbjct: 109 LDDFNHWDMGDIIG------ATGTLFKTNHGELTVRVSEIRLLSKSLR-PLPDKHKGLSD 161

Query: 122 ESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  +++ R++DL  +   +   +KR++II S+R  M+ E ++E  TP++ +      A+ 
Sbjct: 162 QETKYRQRYVDLIANAESRETFIKRSQIIQSVRNFMVGEKYLEVETPMMHSIPGGATAKP 221

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++ 
Sbjct: 222 FVTHHNALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEF 279

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS----------NGNTVSNNFLRICYDDAIRRYGTD 289
             +F + + ++   E+++R   +  +              + + F R+    AI++Y   
Sbjct: 280 YEAFSDYNRMMQMAEDIIRNACKTVNSGSLKIEYNGKEVDLESPFERLTILQAIKKYNPQ 339

Query: 290 KPD 292
             D
Sbjct: 340 YTD 342



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 63/171 (36%), Gaps = 27/171 (15%)

Query: 400 FFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF 459
               G+ L   S     +  + +  G      +   +I+D+P                  
Sbjct: 355 IVKHGESLPHASGLGSLQLALFE--GCAESKLWNPTFIVDYP------------------ 394

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
                     + +D       +++L   G E+A+G    +  E     F      K+  +
Sbjct: 395 ---VEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAARFKAQVAQKDAGD 451

Query: 520 NRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +          RA + G+PP GG   GIDR+VMLL  A+ +R+V LFP  +
Sbjct: 452 DEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTNAQTIRDVILFPQMR 502


>gi|262274919|ref|ZP_06052730.1| lysyl-tRNA synthetase (class II) [Grimontia hollisae CIP 101886]
 gi|262221482|gb|EEY72796.1| lysyl-tRNA synthetase (class II) [Grimontia hollisae CIP 101886]
          Length = 504

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 74/344 (21%), Positives = 150/344 (43%), Gaps = 41/344 (11%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H   DL              +   V ++G +   R      FL ++D  G  Q  A+ 
Sbjct: 37  REHKAADLQAEFGDKSKEELEALDHKVSIAGRIMAKRGP----FLALQDVSGRIQAYASK 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     + K ++ ++     G ++        +    G + ++ ++ ++L+ A   PLP 
Sbjct: 93  D-----VQKELKEQYQGLDIGDIIGVKGALHKSG--KGDLYVNMEEYQLLTKALR-PLPE 144

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R++DL  +   +N  K R+++I+++R  M +++F+E  TP++    
Sbjct: 145 KFHGLTDQELRYRQRYVDLIVNEDSRNTFKVRSKLISAIRRYMESKDFMEVETPMMQVIP 204

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 205 GGAAARPFITHHNALDQQMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNP 262

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  ++  M++ + +D+++  E++LR V  E     ++            + R+   +AI
Sbjct: 263 EFTMIEFYMAYADYNDLIDLTEDMLRTVALEVLGQTSMPYGEHTVDFGGKYARMTMLEAI 322

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           + Y  D  D++       +TE  V    ++ +   S+    E +
Sbjct: 323 KHYNPDHADIQA------LTEEDVQDRDKLVAIAESLKIYVEKF 360



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 376 EPKLIQPTFITGYPADVSPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 435

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K+  ++           A + G+PP  G   GIDR+ ML      +R+V LFP 
Sbjct: 436 KAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFPA 495

Query: 565 SQ 566
            +
Sbjct: 496 MR 497


>gi|256852019|ref|ZP_05557406.1| lysyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661412|ref|ZP_05862325.1| lysyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|256615431|gb|EEU20621.1| lysyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547867|gb|EEX23844.1| lysyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
          Length = 514

 Score =  196 bits (499), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 77/436 (17%), Positives = 155/436 (35%), Gaps = 35/436 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y+     +L         +++G +   R  G + F DI D  G  Q+    D    E 
Sbjct: 50  EKYKGEDKDELNADMP--QTKIAGRMMAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEEN 107

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +   +    G+      E       TG++ + A  +  LS A   PLP        
Sbjct: 108 YQIFKKSDLGDFLGI------EGEVMKTDTGELTVRAHHVTFLSKALR-PLPDKYHGLQN 160

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
               ++ R+LDL  +         RT+II ++R  +   +F+E  TP+L        AR 
Sbjct: 161 VEQIYRQRYLDLMTNHDSYMRFVHRTKIIQAIRDYLNNRDFLEVETPVLHNIPGGAEARP 220

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A +   + L+  G +R ++I   FR+E   +   P EF +L+ 
Sbjct: 221 FITHHNALDIDLY-LRIALELPLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTELET 278

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  D+++  E +++   +  ++                   Y   + DL  P   
Sbjct: 279 YCAYWDFHDVMDEAEGIIKAAAKVVTDDGK--------------VNYQGTEIDLGKPFRR 324

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++ +         F K ++++   +V                 +N +    G+  +   
Sbjct: 325 VHMVDLIKEQTGVDFWKPMTLDEAKKVAEEHGIHVEPFWKVGHIINAFFEEFGEKSIVNP 384

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVR---LDMQDGDSCFFIAG--DPLKFCSFAA 414
            +     G+   + P+AK          R     + M+ G++   +    D  +      
Sbjct: 385 TFVY---GHPVEISPLAKKNADDPRFTDRFEIFIMGMEYGNAFSELNDPIDQRERFEAQM 441

Query: 415 DARNHIAQELGIINCN 430
             R+    E  +I+ +
Sbjct: 442 AERDAGNDEADVIDED 457



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 6/152 (3%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+E GI     ++   I++  F E+ E  K I      +  P       K N      
Sbjct: 350 KVAEEHGIHVEPFWKVGHIINAFFEEFGE--KSIVNPTFVYGHPVEISPLAKKNADDPRF 407

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMP 534
             ++++   G E  +     +      + F      ++   +          RA + GMP
Sbjct: 408 TDRFEIFIMGMEYGNAFSELNDPIDQRERFEAQMAERDAGNDEADVIDEDFVRALEYGMP 467

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 468 PTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 499


>gi|157414225|ref|YP_001485091.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|166980068|sp|A8G7C4|SYK_PROM2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157388800|gb|ABV51505.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 512

 Score =  196 bits (499), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 69/317 (21%), Positives = 130/317 (41%), Gaps = 25/317 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVM 78
           V ++G V   R  G I F  I D  G  Q+  +    +   E  K +  E +  I  +  
Sbjct: 53  VSVAGRVLAKRVMGKIAFFTISDQEGQIQLYLDKRIINLNLEKQKLLSFEDIKEIVDIGD 112

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                        G++ +  +K E+LS + + PLP           R++ R+LDL  +  
Sbjct: 113 WIGVYGTIKKTNKGELSIKVEKWEMLSKSLQ-PLPDKWHGLTDIEKRYRQRYLDLIVNPH 171

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQ 196
            KN+ K R + I+ +R  +   NF+E  TPIL + +    AR F+          Y L  
Sbjct: 172 SKNVFKTRAKCISFIRKWLDNRNFLEIETPILQSEAGGAEARPFITHHNTLDIPLY-LRI 230

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + ++  GF++ +++   FR+E   +   P EF  +++  ++ +  D++N  E +
Sbjct: 231 ATELHLKRMVVGGFEKVYEMGRIFRNEGISTRHNP-EFTSVEIYEAYSDYFDMMNLTEEL 289

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEHFVHSEFRV 313
           ++ V  +                   I  Y   + D   P   I M ++ + +   +F  
Sbjct: 290 IKDVVAD--------------SCGSLIINYQNKEIDFSKPWLRISMKDIVKKYTGIDFDS 335

Query: 314 FS-KILSVNPGYEVWAI 329
           FS   L+     +   +
Sbjct: 336 FSGDFLAAKQAVKNINV 352



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 55/158 (34%), Gaps = 27/158 (17%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
            +      N + ++   +     E  +++D+P      E   +   H             
Sbjct: 358 VNTMGRLLNEVFEQ--KVESKLIEPTFVIDYPV-----EISPLARPHF------------ 398

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
                      +++L   G E+A+            +        ++  +          
Sbjct: 399 ----DNKEIVQRFELFIVGRELANAFSELIDPVDQRERMQLQQSLRDEGDLEAHCIDEDF 454

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A + GMPP GG+  GIDR++ML+  + ++R+V  FP
Sbjct: 455 LNALEIGMPPTGGLGIGIDRLIMLITNSASIRDVIPFP 492


>gi|282933691|ref|ZP_06339049.1| lysine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|281302181|gb|EFA94425.1| lysine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 507

 Score =  196 bits (499), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 77/436 (17%), Positives = 155/436 (35%), Gaps = 35/436 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y+     +L         +++G +   R  G + F DI D  G  Q+    D    E 
Sbjct: 43  EKYKGEDKDELNADMP--QTKIAGRMMAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEEN 100

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +   +    G+      E       TG++ + A  +  LS A   PLP        
Sbjct: 101 YQIFKKSDLGDFLGI------EGEVMKTDTGELTVRAHHVTFLSKALR-PLPDKYHGLQN 153

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
               ++ R+LDL  +         RT+II ++R  +   +F+E  TP+L        AR 
Sbjct: 154 VEQIYRQRYLDLMTNHDSYMRFVHRTKIIQAIRDYLNNRDFLEVETPVLHNIPGGAEARP 213

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A +   + L+  G +R ++I   FR+E   +   P EF +L+ 
Sbjct: 214 FITHHNALDIDLY-LRIALELPLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTELET 271

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  D+++  E +++   +  ++                   Y   + DL  P   
Sbjct: 272 YCAYWDFHDVMDEAEGIIKAAAKVVTDDGK--------------VNYQGTEIDLGKPFRR 317

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++ +         F K ++++   +V                 +N +    G+  +   
Sbjct: 318 VHMVDLIKEQTGVDFWKPMTLDEAKKVAEEHGIHVEPFWKVGHIINAFFEEFGEKSIVNP 377

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVR---LDMQDGDSCFFIAG--DPLKFCSFAA 414
            +     G+   + P+AK          R     + M+ G++   +    D  +      
Sbjct: 378 TFVY---GHPVEISPLAKKNADDPRFTDRFEIFIMGMEYGNAFSELNDPIDQRERFEAQM 434

Query: 415 DARNHIAQELGIINCN 430
             R+    E  +I+ +
Sbjct: 435 AERDAGNDEADVIDED 450



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 6/152 (3%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+E GI     ++   I++  F E+ E  K I      +  P       K N      
Sbjct: 343 KVAEEHGIHVEPFWKVGHIINAFFEEFGE--KSIVNPTFVYGHPVEISPLAKKNADDPRF 400

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMP 534
             ++++   G E  +     +      + F      ++   +          RA + GMP
Sbjct: 401 TDRFEIFIMGMEYGNAFSELNDPIDQRERFEAQMAERDAGNDEADVIDEDFVRALEYGMP 460

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 461 PTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 492


>gi|16803935|ref|NP_465420.1| asparaginyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47096479|ref|ZP_00234071.1| asparaginyl-tRNA synthetase [Listeria monocytogenes str. 1/2a
           F6854]
 gi|224500248|ref|ZP_03668597.1| asparaginyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|224501304|ref|ZP_03669611.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254827219|ref|ZP_05231906.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254831503|ref|ZP_05236158.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|254899407|ref|ZP_05259331.1| asparaginyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912454|ref|ZP_05262466.1| asparaginyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936781|ref|ZP_05268478.1| asparaginyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284802341|ref|YP_003414206.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995483|ref|YP_003417251.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|20139878|sp|P58695|SYN_LISMO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|16411349|emb|CAC99974.1| ansB [Listeria monocytogenes EGD-e]
 gi|47015132|gb|EAL06073.1| asparaginyl-tRNA synthetase [Listeria monocytogenes str. 1/2a
           F6854]
 gi|258599602|gb|EEW12927.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258609376|gb|EEW21984.1| asparaginyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284057903|gb|ADB68844.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060950|gb|ADB71889.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|293590436|gb|EFF98770.1| asparaginyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 430

 Score =  196 bits (499), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 31/294 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDIFATAKALTQETSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +             E++   +E++S + + P+     +E+       +R L L
Sbjct: 72  TGTINEDTRSPF-------GYEMAVSSVEVISESHDYPITP---KEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +  H  +  R  II +       E F++   PILT S+PEG  +        + +F  
Sbjct: 122 RSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L   
Sbjct: 180 LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQVQ 238

Query: 254 ENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRYGTDKPD 292
           EN +  + +   +   +                  F RI Y +AI R      D
Sbjct: 239 ENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIERLHELGFD 292



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 46/124 (37%), Gaps = 14/124 (11%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN--GFEIASGGIRNHM 500
           +E          A  PF MP+        ND + + A   D++      EI  G  R H 
Sbjct: 312 FEKPVFITHYPKAIKPFYMPED-----PENDQVVLCA---DMIAPEGYGEIIGGSERIHD 363

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            E +     +  +     +  +       + G  PH G   G++R V  + G ++VRE  
Sbjct: 364 LETLQARMEDFDLD----QEAYSWYLDLARYGSVPHSGFGLGLERTVAWISGTEHVRETI 419

Query: 561 LFPM 564
            FP 
Sbjct: 420 PFPR 423


>gi|317495481|ref|ZP_07953849.1| lysyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914295|gb|EFV35773.1| lysyl-tRNA synthetase [Gemella moribillum M424]
          Length = 499

 Score =  196 bits (499), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 67/392 (17%), Positives = 147/392 (37%), Gaps = 43/392 (10%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   ++           + +    V ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHLSSEIVAEFDKYSKEELEEKNVSVTIAGRIMTKRGKGKAGFAHVQDLGGQIQIYVRQ 99

Query: 55  DSAC--FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           D     +E  K++    ++ + G++   +          G++ + A    IL+ A   PL
Sbjct: 100 DRVGDSYEYFKTLDLGDIVGVTGVLFKTNV---------GELSVKADNFVILTKALR-PL 149

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA 171
           P           R++ R++DL  +   K   + R++II  MR  +    ++E  TP++ +
Sbjct: 150 PDKFHGLKDVEERYRRRYVDLIMNEESKETFIMRSKIIQIMRSYLNDRGYLEVETPMMHS 209

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +    AR F+          + +  A +   + L+  G ++ ++I   FR+E   +   
Sbjct: 210 VAGGAAARPFVTHHNALDMQLF-MRIALELPLKRLIVGGLEKVYEIGRAFRNEGVSTRHN 268

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  +++  ++ + +DI++  E+++  +  E                      YG D+
Sbjct: 269 P-EFTMIELYEAYADFNDIMDLTESMIAYICNEIHGTTK--------------IMYGEDE 313

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
            DL       ++ +         F K ++    + +          +      +NE+  +
Sbjct: 314 IDLTPKWRRIHMVDAIKEVTGVDFWKEMTDEEAHTLAKEHNVPVRKDMKVGHIINEFFET 373

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
             +  L    +     G+   + P+AK     
Sbjct: 374 FVEETLVQPTFVY---GHPVEVSPLAKTNPED 402



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 5/108 (4%)

Query: 465 GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVE 519
            +  L   +    +   +++L     E A+     +      + F      K+     V 
Sbjct: 391 EVSPLAKTNPEDTRFTDRFELFIVRREHANAFSELNDPIDQKERFLAQMDEKDAGNEEVY 450

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                   + + GMPP GG+  GIDR+VMLL  + ++R+V LFP  ++
Sbjct: 451 EMDEDFVESLEYGMPPTGGLGIGIDRLVMLLTNSASIRDVLLFPYMKH 498


>gi|323340117|ref|ZP_08080382.1| lysine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323092494|gb|EFZ35101.1| lysine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 497

 Score =  196 bits (499), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 67/352 (19%), Positives = 136/352 (38%), Gaps = 27/352 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L   D+   V ++G +   R  G + F D++D  G  Q+    D    ++
Sbjct: 44  EKYGDMDKEELNDKDI--IVTIAGRMVAKRGKGKVGFADLQDKTGRMQLYIRKDEVGEDM 101

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
               +   +    G  +  + + I  ++  G++ + A K+  LS A   PLP        
Sbjct: 102 YHIFKRSDL----GDFLGITGQVIKTDM--GELTVKATKLTFLSKALR-PLPDKYHGLQD 154

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
               ++ R+LDL  +    +    R+RI+ ++R  +    F+E  TP+L T +    AR 
Sbjct: 155 IEQIYRQRYLDLITNRESYDRFVNRSRIVTAIRRYLDKNGFLEVETPVLHTQAGGASARP 214

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + + + L+  G +R ++I   FR+E   +   P EF  L+ 
Sbjct: 215 FITHHNALDIELY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTHHNP-EFTMLET 272

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  D+++  E + +   +  S              D++I  Y   + +   P   
Sbjct: 273 YAAYFDFKDVMDETEGIFKAAAKVVS--------------DNSIVTYQGTEVNFDKPFKR 318

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
            ++ +         F K ++V    ++                 +NE+    
Sbjct: 319 AHMVDLIKEYTGVDFWKEMTVEEARKIADEHGVHYESYWKVGHIINEFFEEF 370



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 81/223 (36%), Gaps = 15/223 (6%)

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIV--------NTEAIRVRLDMQDGDSCFFIAGDPLK 408
           AY  ++             AK ++               +        D      G    
Sbjct: 275 AYFDFKDVMDETEGIFKAAAKVVSDNSIVTYQGTEVNFDKPFKRAHMVDLIKEYTGVDFW 334

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                 +AR  IA E G+   + ++   I++  F+E   E+K +D         +    +
Sbjct: 335 KEMTVEEAR-KIADEHGVHYESYWKVGHIIN-EFFEEFCEDKIVDPTFVYGHPVEISPLA 392

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG---- 524
            K  D       +++L   G E A+     +      Q F      ++   +   G    
Sbjct: 393 KKNAD-DPRFTDRFELYILGGEYANAFTELNDPIDQRQRFEAQVEERKAGNDEAEGIDED 451

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              A + GMPP GG+  GIDR+VMLL  A+++R+V LFP  + 
Sbjct: 452 YIEAMEYGMPPTGGLGIGIDRLVMLLTNAESIRDVLLFPTMKT 494


>gi|118594577|ref|ZP_01551924.1| lysyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118440355|gb|EAV46982.1| lysyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 504

 Score =  196 bits (499), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 66/291 (22%), Positives = 118/291 (40%), Gaps = 16/291 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            +   G    ++G +   R  G   F  I+D  G  Q+    D    E    + S +   
Sbjct: 57  NLEKKGVIASIAGRMMLKRVMGKASFATIQDKQGKIQLYVARDLINSETNPELYSHFKKW 116

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G ++         N  T ++ +   +I +L+ +   PLP        +  +++ R++D
Sbjct: 117 DLGDILGAKGRVFKTN--TNELTIEVTEIILLTKSIR-PLPEKFHGLSDQETKYRQRYVD 173

Query: 133 LRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   ++   KR++I++ +R  M    F+E  TP+L        AR F          
Sbjct: 174 LIVNEDTRDTFLKRSKIMSGIRTFMQEHEFLEVETPMLHPIPGGATARPFKTHHNALDME 233

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++   ++ E + ++
Sbjct: 234 MY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SVRHNPEFTMMEFYAAYTEYNWLM 291

Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
              E+ +R V E       V+           F R+   +AI +Y     +
Sbjct: 292 EFTESCIRYVAELVVGSTKVNYQGKEIDFGKSFDRLTMVEAILKYSDKYNE 342



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---- 525
           + +D       +++L   G EIA+G    + +E     F     +KE  +          
Sbjct: 402 RASDTNPDITERFELFIAGREIANGFSELNDAEDQAVRFKAQVEAKESGDEEAMYYDADF 461

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            RA + G+PP GG   GIDR+VML+  + ++R+V LFP  +
Sbjct: 462 IRALEYGLPPTGGCGIGIDRLVMLVTDSPSIRDVLLFPHMR 502


>gi|321473938|gb|EFX84904.1| hypothetical protein DAPPUDRAFT_99304 [Daphnia pulex]
          Length = 468

 Score =  196 bits (499), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 86/381 (22%), Positives = 147/381 (38%), Gaps = 47/381 (12%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDI-RDHYGITQVVANPDSACFEIAK---S 64
            GDLG S +   V   G +H  R  G   F  + +    +  ++A  +S      K    
Sbjct: 15  VGDLGTSVIDKKVWARGRLHTSRAKGKQCFFLLRQQQSTVQCLLAVSESTSKAFVKFVAG 74

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES- 123
           +  E V+ ++G+V S   +   A      +EL   ++ ++S AE        +   PE  
Sbjct: 75  ITKESVIDVEGIVRSVPQKIEGAT--QQDVELHVTQVWVISAAEPRLPLQIEDASRPEEE 132

Query: 124 ------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
                        R   R LDLR  T       +  +    R  +    F+E  TP + +
Sbjct: 133 KEGELAIRVNQETRLDNRVLDLRTPTNQAIFRIQAAVCRLFREALDQRKFVEIHTPKIIS 192

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +    S     ++ A  Q+PQ YKQ+ +A+ F++ + I   FR ED  + R  
Sbjct: 193 AASEGGANVFTVSYFKGSAYLA--QSPQLYKQMAIAADFEKVYTIGAVFRAEDSNTHRHL 250

Query: 232 GEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVS----------------NNF 274
            EF  LD+EM+F     ++L+T+  VL  VF                          +  
Sbjct: 251 TEFVGLDLEMAFHSHYHEVLDTIGVVLTEVFRGLQKDCMQEIATVNRQFPSEPFTFLDPP 310

Query: 275 LRICYDDAIRRYGT------DKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYE 325
           LR+ + +A+           D+ DL  P+   +  + +    ++F +  K  L+V P Y 
Sbjct: 311 LRLEFPEAVEMLRQAGEQIGDEDDLSTPMEKLLGRLVKAKYDTDFYILDKYPLAVRPFYT 370

Query: 326 VWAIPAKGGGGNRAFCDRMNE 346
           +     K    +     R  E
Sbjct: 371 MPDPNNKKYSNSYDIFMRGEE 391



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                   +  YD+   G EI SG  R H  E + +   +
Sbjct: 360 KYPLAVRPFYTMPD--------PNNKKYSNSYDIFMRGEEIMSGAQRIHDPEYLSERAKH 411

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI    ++        +F+ G PPH G   G++R+ ML LG  N+R+ S+FP       
Sbjct: 412 HGIDLSKIKA----YIDSFRYGCPPHAGGGIGMERVAMLFLGLDNIRKTSMFPRDPKRIT 467

Query: 571 L 571
            
Sbjct: 468 P 468


>gi|297205109|ref|ZP_06922505.1| lysine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297149687|gb|EFH29984.1| lysine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 513

 Score =  196 bits (498), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 77/436 (17%), Positives = 155/436 (35%), Gaps = 35/436 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y+     +L         +++G +   R  G + F DI D  G  Q+    D    E 
Sbjct: 50  EKYKGEDKDELNADMP--QTKIAGRMMAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEEN 107

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +   +    G+      E       TG++ + A  +  LS A   PLP        
Sbjct: 108 YQIFKKSDLGDFLGI------EGEVMKTDTGELTVRAHHVTFLSKALR-PLPDKYHGLQN 160

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
               ++ R+LDL  +         RT+II ++R  +   +F+E  TP+L        AR 
Sbjct: 161 VEQIYRQRYLDLMTNHDSYMRFVHRTKIIQAIRDYLNNRDFLEVETPVLHNIPGGAEARP 220

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A +   + L+  G +R ++I   FR+E   +   P EF +L+ 
Sbjct: 221 FITHHNALDIDLY-LRIALELPLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTELET 278

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  D+++  E +++   +  ++                   Y   + DL  P   
Sbjct: 279 YCAYWDFHDVMDEAEGIIKAAAKVVTDDGK--------------VNYQGTEIDLGKPFRR 324

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++ +         F K ++++   +V                 +N +    G+  +   
Sbjct: 325 VHMVDLIKEQTGVDFWKPMTLDEAKKVAEEHGIHVEPFWKVGHIINAFFEEFGEKSIVNP 384

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVR---LDMQDGDSCFFIAG--DPLKFCSFAA 414
            +     G+   + P+AK          R     + M+ G++   +    D  +      
Sbjct: 385 TFVY---GHPVEISPLAKKNADDPRFTDRFEIFIMGMEYGNAFSELNDPIDQRERFEAQM 441

Query: 415 DARNHIAQELGIINCN 430
             R+    E  +I+ +
Sbjct: 442 AERDAGNDEADVIDED 457



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 6/152 (3%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+E GI     ++   I++  F E+ E  K I      +  P       K N      
Sbjct: 350 KVAEEHGIHVEPFWKVGHIINAFFEEFGE--KSIVNPTFVYGHPVEISPLAKKNADDPRF 407

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMP 534
             ++++   G E  +     +      + F      ++   +          RA + GMP
Sbjct: 408 TDRFEIFIMGMEYGNAFSELNDPIDQRERFEAQMAERDAGNDEADVIDEDFVRALEYGMP 467

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 468 PTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 499


>gi|33241228|ref|NP_876170.1| lysyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|39932090|sp|Q7V9Q0|SYK_PROMA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33238758|gb|AAQ00823.1| Lysyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 502

 Score =  196 bits (498), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 62/366 (16%), Positives = 133/366 (36%), Gaps = 30/366 (8%)

Query: 1   MHRYRTHSCGDLGVSDV----GS----FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           ++ + TH   +L         G      V ++G V   R  G + F  + D  G  Q+  
Sbjct: 25  LNFHPTHKTAELQSDHKDLPNGQDREIKVAVAGRVLSRRVMGKLAFFTLLDESGSIQLFL 84

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINA---NIITGQIELSAQKIEILSVAEE 109
              +         +      I   V +     +N        G++ +     +IL  + +
Sbjct: 85  EKATLEEFDTSENQVSSFKQITDFVDAGDWLGVNGILRRTDRGELSIKVHSWKILCKSLQ 144

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRI-INSMRCRMIAENFIECSTPI 168
            PLP           R++ R+LDL  +   +   +R  + ++++R  +   +F+E  TP+
Sbjct: 145 -PLPDKWHGLADIEKRYRQRYLDLVVNPDSRKTFRRRALTVSAIRRWLDERSFLEIETPV 203

Query: 169 LTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L +++    AR F+          + L  A + + + L+  GF+R +++   FR+E   +
Sbjct: 204 LQSAAGGADARPFITHHNTFDIPLF-LRIATELHLKRLVVGGFERVYELGRIFRNEGIST 262

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
              P EF  +++  +F + + +++  E ++  V  E      +S   + +      RR  
Sbjct: 263 RHNP-EFTSVEIYQAFADYNQMMDLTEELISSVCIEICGSTKISYQDVSLDLTPPWRR-- 319

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVF---SKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                    + M  +       +F  F    +  S         +P+      R   +  
Sbjct: 320 ---------VTMQELVLEATGIDFDNFDGDQEKASSEMINLGLEVPSTADSVGRLMNEAF 370

Query: 345 NEWARS 350
            +    
Sbjct: 371 EQKVEP 376



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 52/141 (36%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +  N  +  +++D+P      +   +   H      +  M              +++L  
Sbjct: 374 VEPNLIQPTFVIDYPI-----DISPLARKHR----CKEDMVE------------RFELFI 412

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAG 542
            G E A+            +      I K   +            A + GMPP GG+  G
Sbjct: 413 AGRETANAFSELIDPIDQRERLLAQQIRKNEGDIEAHSLDEDFLNALEVGMPPTGGLGIG 472

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR+VMLL  + ++R+V  FP
Sbjct: 473 IDRLVMLLTDSPSIRDVIAFP 493


>gi|219850950|ref|YP_002465382.1| aspartyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219545209|gb|ACL15659.1| aspartyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 424

 Score =  196 bits (498), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 27/308 (8%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCIDGLVM 78
           ++ GWVH VR  GG+ F  IRD  GI QV      A  E+    K V  E V+ + G V 
Sbjct: 10  KIIGWVHEVRDLGGLAFFLIRDRTGIIQVTIPKKKASEEVLAAIKGVSRESVVQVTGQVK 69

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +            G  EL     ++LS ++  LPL V  +       R   RFLD RR  
Sbjct: 70  AMEK-------APGGRELLPSSFDVLSRSDSPLPLDVVEKVPADLDTRLDVRFLDARRPR 122

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           +      R+ ++++++  +    F + +TP + A++ EG  +    +   + +F  L Q+
Sbjct: 123 VAAVFEIRSAVLHAVQQFLHKREFTQITTPKIVAAATEGGTELFPIAYFEKEAF--LNQS 180

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           PQ YKQ++MA+GF++ ++I P FR E+  + +   E   +D+E+SF +  D++  +E ++
Sbjct: 181 PQLYKQMMMAAGFEKVYEIGPIFRAEEHNTTKHLNEATSIDVEVSFADHYDMMTLLEEMI 240

Query: 258 RGVFE-------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPD-LRNPIIMHNVT 303
              +E             E          F R+ Y +AI        + ++    + +  
Sbjct: 241 ITTYEHISQTCQDQLANLEIEEFEVPKGPFTRLPYAEAIEIAAKKIDEPIKYGDDLGSAA 300

Query: 304 EHFVHSEF 311
           E  V  E 
Sbjct: 301 ERAVGEEM 308



 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 32/166 (19%)

Query: 404 GDPLKFCSFAA-DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
            +P+K+       A   + +E+G          +I D+P             +  P+   
Sbjct: 287 DEPIKYGDDLGSAAERAVGEEMG-------AHYFITDWP------------SSIRPYYAM 327

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
                     D    KA  +DL+    E++SG  R H  ++++      G+S       F
Sbjct: 328 PYED------DPSICKA--FDLMHPRMELSSGAQRVHQYDLLVSQIIAKGLSP----ESF 375

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
               R F+ GMPPH G   G +R+VM +LG +N+RE  LFP  ++ 
Sbjct: 376 EFYLRPFRYGMPPHAGFGVGAERLVMTMLGLQNIREAVLFPRDRHR 421


>gi|303325874|ref|ZP_07356317.1| asparagine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302863790|gb|EFL86721.1| asparagine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 454

 Score =  196 bits (498), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 127/375 (33%), Gaps = 41/375 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L      + + + GWV   R   G  F++I D   +  +    D      A  
Sbjct: 3   RTLIIDALNAEKAQNAITICGWVRTRRDAKGFSFVEINDGSCLANMQCIVDEGTEAHAAL 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
             +       G  ++   E + +       E+ A+ + +  +A+    P+  +R   E +
Sbjct: 63  GEAN-----TGAALAVVGELVPSPGKGQTWEVRAKSVTVFGLADTETFPLQKKRHSDEFL 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R     L  R +        R+    ++        F    TP+LT S  EGA +    +
Sbjct: 118 RG-IAHLRARTNKYGAAFRIRSEAGRAVHDFFHGRRFAWVHTPVLTGSDCEGAGEMFRVT 176

Query: 185 RV------NQGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            +        G F+  P       Q +   +A G  R +   P FR E+  + R   EF+
Sbjct: 177 TLAPGEKNTDGDFFNRPCNLTVSGQLEAEALALGLGRVYTFGPTFRAENSNTPRHAAEFW 236

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNF 274
            ++ EM+F +  D++   E++ R V E                            +   F
Sbjct: 237 MIEPEMAFADLSDLMELGESLTRHVIEHVLAHCEADVKLFDNFVDKGLLERLQGMLRQPF 296

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSV---NPGYEVWAI 329
            R+ Y +AIR       +   P+       TEH  +     F + + V       + + +
Sbjct: 297 ARVPYAEAIRILEDSGKEFAFPVTFGVDLQTEHERYLAEEHFQRPVIVYDYPKEIKAFYM 356

Query: 330 PAKGGGGNRAFCDRM 344
            A       A  D +
Sbjct: 357 RANDDNETVAAMDML 371



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 60/157 (38%), Gaps = 10/157 (6%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH--NPFTMPQGGME----SL 469
           AR   A+ + I+  +  EF + + F      E E+ +   H   P  +     E     +
Sbjct: 297 ARVPYAEAIRILEDSGKEFAFPVTFGVDLQTEHERYLAEEHFQRPVIVYDYPKEIKAFYM 356

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
           + ND     A    LV    E+  G  R    + +      +G +       +       
Sbjct: 357 RANDDNETVAAMDMLVPRIGELIGGSQREERLDRLEARIRELGQNP----EDYWWYLDLR 412

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + G  PH G   G +R++MLL G  N+R+V  FP + 
Sbjct: 413 RFGSVPHAGFGLGFERLLMLLTGITNIRDVIPFPRTP 449


>gi|32491190|ref|NP_871444.1| hypothetical protein WGLp441 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|31340438|sp|Q8D2B3|SYK_WIGBR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|25166397|dbj|BAC24587.1| lysS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 493

 Score =  196 bits (498), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 105/542 (19%), Positives = 191/542 (35%), Gaps = 120/542 (22%)

Query: 31  RPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANII 90
           R  G   FL+IR+     Q+  + ++      K +  +      G ++         N  
Sbjct: 66  RVMGKSSFLEIRNIESKIQIYISENNISKNKYKKIIKQ---LDIGDIIGVLGVLFKTN-- 120

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRII 149
           T ++ +  +K+ +L+ + + P P   +    + I ++ R+LDL  +   +N  K R+ II
Sbjct: 121 TEELSVKCKKLYVLTKSVK-PFPNKFQGLLNQEICYRKRYLDLITNKKSRNTFKTRSIII 179

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
           N++R  MI ENF+E  TP++      G     +    +      L  AP+ Y + L+  G
Sbjct: 180 NNIRKFMIKENFVEVETPMMHNIPGGGLSKPFITHHSSLNIDLYLRIAPELYLKQLIVGG 239

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
           F++ F+I   FR+E   S+  P EF                  ME  +  +         
Sbjct: 240 FEKIFEINRNFRNEGLSSNHNP-EFT----------------MMEFYVAYI--------- 273

Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
                              D  DL     M  V     +   ++F+K       Y  + I
Sbjct: 274 -------------------DYEDL-----MKIVENLLNYIVDKIFNK---NKINYNNFMI 306

Query: 330 PAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV 389
             +      +  D + E+ ++  Q  ++ I    D          +AK  NI   +   V
Sbjct: 307 NFEKPFKKISMQDSICEYCKNVTQSDISDIKIITD----------IAKSFNITVEKNWGV 356

Query: 390 RLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE 449
                                      +  I  E   +  N  +  +++D+P        
Sbjct: 357 ------------------------GKLQEKIFSE--KVEKNLIQPTFVIDYP-------- 382

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                     T       + K N    +   +++L   G EI +G    +  +     F 
Sbjct: 383 ----------TEISPLARAKKNN---KLITDRFELFVCGNEIGNGFSELNDPKEQKNRFL 429

Query: 510 NVGISKEVVENRFGG---LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
               +K + E           + + G+PP  G   GIDR+VM+L    ++++V LFP  +
Sbjct: 430 EQLKNKTLEEQNIFYDKDYITSLEYGLPPTAGCGIGIDRLVMILTNNYSIKDVILFPTLR 489

Query: 567 NF 568
           N 
Sbjct: 490 NA 491


>gi|332967664|gb|EGK06775.1| lysine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 504

 Score =  196 bits (498), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 64/302 (21%), Positives = 127/302 (42%), Gaps = 22/302 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   S  +L   ++   V+++G +   R  G   F  I+D  G  Q+  N      +I
Sbjct: 52  EKYGALSKEELDPQEI--PVKIAGRMMLKRQMGKASFATIQDVSGQIQLYLNNKGVSQDI 109

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             +     +  I G V              G++ +   +I +L+ +   PLP        
Sbjct: 110 LDAFNHWDMGDIVGAV------GTLFKTNHGELTVRVSEIRLLTKSLR-PLPSKFHGLSD 162

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  +++ R++DL  +   ++  +KR++I+ S+R  M+ E ++E  TP++        A+ 
Sbjct: 163 QETKYRQRYVDLIANPDSRDTFIKRSQIVQSIRNFMVNEQYLEVETPMMHPIPGGATAKP 222

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++ 
Sbjct: 223 FVTHHNALDMPLY-LRIAPELYLKRLVVGGLERVFEINRNFRN-EGMSVRHNPEFTMMEF 280

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDK 290
             +F + + ++   E V+R      +    ++ N         F R+    AI+++    
Sbjct: 281 YEAFCDYERMMEMTEGVIRAASHAVNGTAKITYNGKEVDLESPFERLTILQAIKKFNPQY 340

Query: 291 PD 292
            D
Sbjct: 341 TD 342



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 73/202 (36%), Gaps = 30/202 (14%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +  +  + K       E +     ++         G+ L   S     +  + +  G   
Sbjct: 327 LTILQAIKKFNPQYTDEQLHDAEWLKK---EIVKHGESLPHASGLGSLQLALFE--GCTE 381

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              +   +I+D+P                            + +D  S    +++L   G
Sbjct: 382 SKLWNPTFIIDYP---------------------VEVSPLARASDTKSDLTERFELFVVG 420

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGID 544
            E+A+G    +  E     F +    K+  ++          RA + G+PP GG   GID
Sbjct: 421 RELANGYSELNDPEDQAARFKSQVAQKDAGDDEAMHFDADYIRAMEFGLPPTGGCGIGID 480

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VMLL  A+ +R+V LFP  +
Sbjct: 481 RLVMLLTDAQTIRDVVLFPQMR 502


>gi|46908129|ref|YP_014518.1| asparaginyl-tRNA synthetase [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47094410|ref|ZP_00232099.1| asparaginyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|226224500|ref|YP_002758607.1| asparaginyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254825609|ref|ZP_05230610.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254852800|ref|ZP_05242148.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254931933|ref|ZP_05265292.1| asparaginyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|254992078|ref|ZP_05274268.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|255521649|ref|ZP_05388886.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300763794|ref|ZP_07073791.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|59798547|sp|Q71YB9|SYN_LISMF RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|46881399|gb|AAT04695.1| asparaginyl-tRNA synthetase [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47017218|gb|EAL08062.1| asparaginyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|225876962|emb|CAS05671.1| Putative asparaginyl-tRNA synthetase [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258606127|gb|EEW18735.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293583485|gb|EFF95517.1| asparaginyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293594852|gb|EFG02613.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300515530|gb|EFK42580.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|328466245|gb|EGF37402.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 1816]
 gi|328473611|gb|EGF44448.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 220]
 gi|332312337|gb|EGJ25432.1| Asparaginyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 430

 Score =  196 bits (498), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 74/294 (25%), Positives = 120/294 (40%), Gaps = 31/294 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDIFATAKALTQETSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +             E++   +E++S + + P+     +E+       +R L L
Sbjct: 72  TGTINEDTRSPF-------GYEMAVSGVEVISESHDYPITP---KEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +  H  +  R  II +       E F++   PILT S+PEG  +       ++ +F  
Sbjct: 122 RSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFDEDAF-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L   
Sbjct: 180 LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQVQ 238

Query: 254 ENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRYGTDKPD 292
           EN +  + +   +   +                  F RI Y +AI R      D
Sbjct: 239 ENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIERLHELGFD 292



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 46/124 (37%), Gaps = 14/124 (11%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN--GFEIASGGIRNHM 500
           +E          A  PF MP+        ND + + A   D++      EI  G  R H 
Sbjct: 312 FEKPVFITHYPKAIKPFYMPED-----PENDQVVLCA---DMIAPEGYGEIIGGSERIHD 363

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            E +     +  +     +  +       + G  PH G   G++R V  + G ++VRE  
Sbjct: 364 LETLQARMEDFDLD----QEAYSWYLDLARYGSVPHSGFGLGLERTVAWISGTEHVRETI 419

Query: 561 LFPM 564
            FP 
Sbjct: 420 PFPR 423


>gi|68071131|ref|XP_677479.1| lysine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56497613|emb|CAH98977.1| lysine--tRNA ligase, putative [Plasmodium berghei]
          Length = 516

 Score =  196 bits (498), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 100/574 (17%), Positives = 193/574 (33%), Gaps = 117/574 (20%)

Query: 1   MHRYRTHSCGDLGVSDVGSFV-RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC 58
           + +Y+    G+     +   +  ++G + RV   G  + F D+       QV+AN     
Sbjct: 49  IEKYKNLENGE----HLEQTILNITGRIMRVSSSGQKLRFFDLVGDGKRIQVLANYSFHD 104

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E +  V     +    +V              G++ +  ++  +LS    +    +G +
Sbjct: 105 KEKSNFVECYDKIKRGDIV---GIIGFPGKSKKGELSIFPKETILLSPCLHMLPMKYGLK 161

Query: 119 EYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEG 176
           +    IR++ R+LDL   ++     + RT+IIN +R  +  + F+E  TP +   +    
Sbjct: 162 DT--EIRYRQRYLDLLINESTRNVFITRTKIINFLRNFLNDQGFMEVETPSMNLMAGGAS 219

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A +   ++L+  G D+ ++I   FR+E   +   P EF  
Sbjct: 220 ARPFITHHNDLDLDLY-LRIATELPLKMLIVGGLDKVYEIGKVFRNEGIDNTHNP-EFTS 277

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
            +   ++ +  D++   EN    +         +               Y  D P+ ++P
Sbjct: 278 CEFYWAYADYYDLIKWSENFFSKLVYHLFGSYKIL--------------YNKDGPE-KDP 322

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           I +              + KI  V    ++  +  +    +    ++M            
Sbjct: 323 IEID---------FTPPYPKISLVEELEKITKVKLEQPFDSTETINKM------------ 361

Query: 357 AYIFWRLDESGNVAGMGP--VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
                 + +  N+    P   AK L+ + +  I      +     FFI   P      A 
Sbjct: 362 ----INIIKENNIEMPNPPTAAKLLDQLASHFIENIYQNKP----FFIIEHPQIMSPLAK 413

Query: 415 DARNH--IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
             R+   + + L +  C                 E        ++PF   +      K  
Sbjct: 414 YHRSKPGLTERLEMFICGK---------------EVLNAYTELNDPFKQKECFSAQQKDK 458

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +    +AF  D                                            + + G
Sbjct: 459 EKGDTEAFHCD---------------------------------------AAFCTSLEYG 479

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +PP GG+  GIDRI M L    ++++V LFP  +
Sbjct: 480 LPPTGGLGLGIDRITMFLTNKNSIKDVILFPTMK 513


>gi|322381866|ref|ZP_08055820.1| asparaginyl-tRNA synthetase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321154254|gb|EFX46576.1| asparaginyl-tRNA synthetase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 427

 Score =  196 bits (498), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 73/302 (24%), Positives = 119/302 (39%), Gaps = 32/302 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              VG  VR+  W+H  R  G I FL +RD  G  Q   V +  +   ++ A  +  E  
Sbjct: 6   KHHVGQSVRIGCWLHNKRSSGKIQFLQLRDGSGFIQGVVVKSEVNEQVWDAASKLTQESS 65

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G V                 EL+   +EI+ +  E P+     +E+       +R 
Sbjct: 66  LYVTGTVREDDRSQS-------GFELTVDHVEIIQITHEYPVTP---KEHGVDFLMDHRH 115

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +V R++II +++       F    TPILT SS EG  +       ++ +
Sbjct: 116 LWLRAPRQRAIMVIRSQIIRAVQEYFDERGFHLVDTPILTPSSCEGTTNLFHTKYFDEDA 175

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A    R +   P FR E  ++ R   EF+ ++ EM+FVE ++ L
Sbjct: 176 Y--LTQSGQLYIEAA-AMALGRVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEHEESL 232

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRYGTD-KPDLR 294
              E  +  + +                          F RI YD+A+     +   D +
Sbjct: 233 RIQEEFVAHIIKSVLTHCQKELKVLGRDTSKLEACVTPFPRIAYDEAVEFLHENGFEDFK 292

Query: 295 NP 296
             
Sbjct: 293 WG 294



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 52/152 (34%), Gaps = 8/152 (5%)

Query: 417 RNHIAQELGIINCNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           R    + +  ++ N FE F W  DF         +  +        P          D  
Sbjct: 273 RIAYDEAVEFLHENGFEDFKWGEDFGAPHETAIAEAYNKPVFITHYPTEIKAFYMKPDPN 332

Query: 476 SIKAFQY-DLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
             +     DL+      EI  G  R    E+M Q F   G+S    E  +       + G
Sbjct: 333 RPEVVLCADLIAPEGYGEIIGGSQRIDDPELMEQRFKEHGLS----EEAYQWYMDLRRYG 388

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             PH G   G++R V  + G  +VRE   FP 
Sbjct: 389 TVPHCGFGLGLERTVAWICGLDHVRETIPFPR 420


>gi|157692736|ref|YP_001487198.1| asparaginyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157681494|gb|ABV62638.1| asparagine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 452

 Score =  196 bits (498), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 82/321 (25%), Positives = 129/321 (40%), Gaps = 34/321 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVL 71
             V   V +  W+   R  G I FL +RD  G  Q   V A  +   F++AKSV  E  +
Sbjct: 32  KHVDEDVTIGAWIANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEEEVFKLAKSVTQETSV 91

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G V       +         EL  + IE++  A + P+     +E+       +R L
Sbjct: 92  YVTGQVTKDERSPL-------GFELQVKSIEVIHEATDYPITP---KEHGTEFLMDHRHL 141

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR    H  +  R  II +       E F++   PILT S+PEG  +       ++ ++
Sbjct: 142 WLRSKKQHAIMKIRNEIIRATYEFFHQEGFVKVDPPILTGSAPEGTTELFATKYFDEDAY 201

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L 
Sbjct: 202 --LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFNENLE 258

Query: 252 TMENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRY---GTDKPDL 293
             EN +  V +       V  +               F RI YD+AI+     G D  + 
Sbjct: 259 YQENYVTHVVQSVLENCKVELHTLGRDTAKLENIKAPFPRITYDEAIKFLQEKGFDDIEW 318

Query: 294 RNPIIMHNVTEHFVHSEFRVF 314
            +     + T      +  VF
Sbjct: 319 GDDFGAPHETAIAESYDKPVF 339



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 49/140 (35%), Gaps = 26/140 (18%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDL 484
           I  +  +  +I  +P             +  PF M         +   DL++ + +    
Sbjct: 330 IAESYDKPVFITHYP------------TSLKPFYMQPAPDRDDVVLCADLIAPEGYG--- 374

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
                EI  G  R H  E++       G+     +  +       Q G  PH G   G++
Sbjct: 375 -----EIIGGSERVHDLELLEARLKEHGLD----QETYKWYTELRQYGSVPHSGFGLGLE 425

Query: 545 RIVMLLLGAKNVREVSLFPM 564
           R V  + GA +VRE   FP 
Sbjct: 426 RTVAWISGAPHVRETIPFPR 445


>gi|16801076|ref|NP_471344.1| asparaginyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|20139892|sp|Q92AB2|SYN_LISIN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|16414511|emb|CAC97240.1| ansB [Listeria innocua Clip11262]
 gi|313618183|gb|EFR90265.1| asparaginyl-tRNA synthetase [Listeria innocua FSL S4-378]
 gi|313623164|gb|EFR93425.1| asparaginyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 430

 Score =  196 bits (498), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 74/294 (25%), Positives = 120/294 (40%), Gaps = 31/294 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDMFATAKALTQETSLFV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +             E++   +E++S + + P+     +E+       +R L L
Sbjct: 72  TGTINEDTRSPF-------GYEMAVSGVEVISESHDYPITP---KEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +  H  +  R  II +       E F++   PILT S+PEG  +       ++ +F  
Sbjct: 122 RSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFDEDAF-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L   
Sbjct: 180 LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQVQ 238

Query: 254 ENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRYGTDKPD 292
           EN +  + +   +   +                  F RI Y +AI R      D
Sbjct: 239 ENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIERLHELGFD 292



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 40/122 (32%), Gaps = 10/122 (8%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E          A  PF MP+             I    Y       EI  G  R H  E
Sbjct: 312 FEKPVFITHYPKAIKPFYMPEDPENDQVVLCADMIAPEGY------GEIIGGSERIHDLE 365

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +     +  +     +  +       + G  PH G   G++R V  + G ++VRE   F
Sbjct: 366 TLQARMEDFDLD----QEAYSWYLDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPF 421

Query: 563 PM 564
           P 
Sbjct: 422 PR 423


>gi|163857080|ref|YP_001631378.1| lysyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|226710883|sp|A9IQY2|SYK_BORPD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|163260808|emb|CAP43110.1| lysyl-tRNA synthetase [Bordetella petrii]
          Length = 506

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 64/318 (20%), Positives = 129/318 (40%), Gaps = 23/318 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           ++  G  V+++G +   R  G   F  ++D  G  Q+  +  +   E   + +   +   
Sbjct: 59  LAAAGVQVKVAGRMMLKRVMGKASFATVQDGSGRIQIYLDRGTLGDEAYAAFKQWDI--- 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +++        N   G++ + A    +LS +   PLP        + +R++ R++DL
Sbjct: 116 -GDIIAIEGSVFKTN--KGELSVHAATARLLSKSLR-PLPDKFHGVADQELRYRQRYVDL 171

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              D   +    R++ + S+R  M+   F+E  TP+L        A+ F+          
Sbjct: 172 IMTDATRRTFETRSKAVGSIRQVMLDAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMEM 231

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++
Sbjct: 232 F-LRIAPELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYADYRWLMD 289

Query: 252 TMENVLR---------GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIM 299
             E+VLR          V         +S  F R+   +AI +Y       +      + 
Sbjct: 290 FTEHVLRQAAIAATGSAVLTYQDRELDLSRPFDRLTICEAILKYAPAYTQAQLDDAAFVR 349

Query: 300 HNVTEHFVHSEFRVFSKI 317
             + +     +  V ++ 
Sbjct: 350 AELKKLGADVDGPVLARA 367



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 62/162 (38%), Gaps = 27/162 (16%)

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
           P+   +     +  + +E        +   +I+D+P                        
Sbjct: 362 PVLARAGLGALQLALFEE--TAEAQLWNPTYIIDYP---------------------VEV 398

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF--- 522
               + +D       +++L   G EIA+G    +  E   + F     +K+  +      
Sbjct: 399 SPLARASDTRPGITERFELFMTGREIANGFSELNDPEDQAERFRAQVEAKDAGDEEAMYF 458

Query: 523 -GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                RA + GMPP GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 459 DADYIRALEYGMPPTGGCGIGIDRLVMLLTNSPSIRDVILFP 500


>gi|193212439|ref|YP_001998392.1| lysyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|238692632|sp|B3QMN9|SYK_CHLP8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|193085916|gb|ACF11192.1| lysyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 511

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 62/307 (20%), Positives = 127/307 (41%), Gaps = 29/307 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +  +R  G   F  I+D  G  Q+    D    +   + +   +  I G+  
Sbjct: 65  EDVSVAGRIMAIRKMGKASFFHIQDSVGRIQIYLKRDEVGVDSYNTFKLLDIGDIVGV-- 122

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE----------SIRFKY 128
               +  +    TG+I + A++ E+LS +         +    E           +R++ 
Sbjct: 123 ----KGFSFRTKTGEISVHAKEFELLSKSLRPIPIAKEKEVDGEKVVYDAFADRELRYRQ 178

Query: 129 RFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRV 186
           R++DL  +   ++  +KRT+I+  MR    +  ++E  TPIL        AR F      
Sbjct: 179 RYVDLIVNPEVRDTFIKRTKIVALMRNYFASNGWLEVETPILQPIYGGAAARPFTTHHNA 238

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  A + Y + L+  GFD  ++ A  FR+E       P EF Q+++ +++ + 
Sbjct: 239 LDMQLY-LRIANELYLKRLIVGGFDGVYEFAKDFRNEGIDRFHNP-EFTQVELYVAYKDY 296

Query: 247 DDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
             ++  +E++L     E +  +          +   F R+   D+I+ Y   +   ++  
Sbjct: 297 VWMMELVEDLLHKACVEVNGKDSTMFLGNEINLKPPFRRLTIADSIKEYTGMEIRDKSEA 356

Query: 298 IMHNVTE 304
            + ++ +
Sbjct: 357 QLRDIAK 363



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 7/157 (4%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           A  R+ IA++LG+          I+D  F E+ E   K+         P+      K + 
Sbjct: 356 AQLRD-IAKDLGLELDPKISSGKIIDEIFGEFVE--PKLIQPTFITDYPEEMSPLAKKHR 412

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
                  +++L+  G E+ +     +   +  +        ++  ++          RA 
Sbjct: 413 SEPGLVERFELIVGGKEVCNSFSELNDPVIQRERLEEQARLRQRGDDEAMIVDEDFLRAL 472

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP  G+  GIDR+VMLL G  ++R+V  FP  +
Sbjct: 473 EYGMPPCAGLGIGIDRMVMLLTGEDSIRDVIFFPHMK 509


>gi|312796707|ref|YP_004029629.1| lysyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312168482|emb|CBW75485.1| Lysyl-tRNA synthetase (EC 6.1.1.6) [Burkholderia rhizoxinica HKI
           454]
          Length = 510

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 66/307 (21%), Positives = 116/307 (37%), Gaps = 30/307 (9%)

Query: 7   HSCGDLGV--SDVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           HS  DL    +D            V ++G +   R  G   F  ++D  G  Q    P  
Sbjct: 46  HSAADLHARFADTDKNALEALALNVSIAGRMMLKRIMGKASFATVQDGTGQIQFFITPAD 105

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +   + +   +  I       +A  +      G++ +    + +LS A   PLP   
Sbjct: 106 VGADTYDAFKKWDLGDI------IAAHGVLFRTNKGELSVRCTGLRLLSKAIR-PLPDKF 158

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
                +  R++ R++DL       +    RTR I S+R  M   +F+E  TP+L      
Sbjct: 159 HGLSDQETRYRQRYVDLIVTPEARQTFQARTRTIASIRHFMTNADFMEVETPMLHPIPGG 218

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             A+ F+          + L  AP+ Y + L+  G +R F+I   FR+E   S R   EF
Sbjct: 219 AAAKPFITHHNALDMQMF-LRIAPELYLKRLIVGGLNRVFEINRNFRNEGV-SPRHNPEF 276

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRR 285
             ++   ++ +   +++  E ++R    +      V            F R+    AI++
Sbjct: 277 TMMEFYAAYTDYRWLMDFTEQLIRQAALDARGTTAVHYQGRELDLGKPFHRLTITGAIQK 336

Query: 286 YGTDKPD 292
           Y     D
Sbjct: 337 YAPQYSD 343



 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 73/201 (36%), Gaps = 30/201 (14%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVR--LDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426
           +   G + K+    +   +  R  L  +           PL+  +     +  + +E   
Sbjct: 328 LTITGAIQKYAPQYSDAQLADRDWLRAELHRLGVDTHAAPLR-NAGVGALQLALFEE--T 384

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
                +E  +I+D+P                            + +D +     +++L  
Sbjct: 385 AEAQLWEPTYIVDYP---------------------VEVSPLARASDTVPGITERFELFM 423

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAG 542
            G EIA+G    +  E     F      K+  +           RA + GMPP GG   G
Sbjct: 424 TGREIANGFSELNDPEDQAARFRQQVAQKDAGDEEAMYYDADYIRALEYGMPPTGGCGIG 483

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR+VMLL  + ++R+V LFP
Sbjct: 484 IDRLVMLLTDSPSIRDVILFP 504


>gi|217967320|ref|YP_002352826.1| asparaginyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336419|gb|ACK42212.1| asparaginyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 433

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/327 (22%), Positives = 123/327 (37%), Gaps = 33/327 (10%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
              D+     G  V + GW+   R  G I+FL IRD  G  Q VA  D+   E   S   
Sbjct: 7   YIEDIPRIQEG-EVEIRGWLFNKRSSGKIVFLIIRDGTGYIQGVATLDNFTEEELDSFEK 65

Query: 68  E---WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
                 L + G +              G  EL  +++ I+S +E+ P+    ++++    
Sbjct: 66  IPIESSLIVVGDLRREPR-------APGGYELLLKRVNIVSYSEDYPIQ---KKDHSVDF 115

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
             + R L +R    +  +  R+ ++ ++R  +  + F+    PILT SS EG        
Sbjct: 116 LLERRHLWIRSRKQNAILRIRSEVVKAIRDFLDEKGFVLIDAPILTPSSCEGTTTLFSLD 175

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             + G  Y L Q+ Q Y +      F + +   P FR E  ++ R   EF+ ++ EM+F 
Sbjct: 176 YFDLGKAY-LSQSGQLYMEAA-CMAFGKVYCFGPAFRAEKSKTRRHLTEFWMVEPEMAFW 233

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRYGTD 289
           +  D +   E ++  + +                          F RI Y +AI     +
Sbjct: 234 DWQDNMKLQEELVSYIVQRVLEKRKRELEILERDTKPLEKVVPPFPRITYREAIEILKRN 293

Query: 290 KPDLRNPIIM--HNVTEHFVHSEFRVF 314
             D+           T      +  VF
Sbjct: 294 GQDIEYGDDFGGDEETIISNQFDKPVF 320



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 45/129 (34%), Gaps = 19/129 (14%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQG--GMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           D P +              PF M         +  NDLL+ + +         EI  G  
Sbjct: 316 DKPVF-----IHHYPAKIKPFYMQPDPENPNEVLNNDLLAPEGYG--------EIIGGSQ 362

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  +++ +      + +      F       + G  PH G   GI+R V  + G K+V
Sbjct: 363 RIHDLKLLEKKLEEYNLPR----EVFEWYLDLRRYGSVPHSGFGLGIERTVAWICGLKHV 418

Query: 557 REVSLFPMS 565
           RE   FP  
Sbjct: 419 REAIPFPRM 427


>gi|323450275|gb|EGB06157.1| hypothetical protein AURANDRAFT_1254 [Aureococcus anophagefferens]
          Length = 567

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 94/555 (16%), Positives = 171/555 (30%), Gaps = 106/555 (19%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G   R    G +IF D+       QV+++P S      ++  +       G V+ 
Sbjct: 109 TVSVAGRAMRKAGQGKLIFYDLHGSGVKIQVMSDPRSFGAGE-EAWEAINDRLRRGDVVG 167

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFG-EREYPESIRFKYRFLDLRRDTL 138
                       G++ +  +++ +LS    +     G         RF+ R+LDL  +  
Sbjct: 168 VVGSP--GKSKRGELSIFPKELALLSPCLHMLPKGQGASVLKDPDTRFRKRYLDLMVNEG 225

Query: 139 HKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
             ++   R+RI++S+R  +    F+E  TP++   +        V      G    +  A
Sbjct: 226 AADVFAIRSRIVSSVRKYLDDRGFLEVETPMMNMVAGGATAKPFVTYFNELGINVFMRVA 285

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y +  +  G DR ++I   FR+E       P           F   +  +       
Sbjct: 286 PELYLKTCVVGGLDRVYEIGRQFRNEGMDLTHNPE----------FTTCEFYMAYA---- 331

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
                                          D  DL       ++TE  + S        
Sbjct: 332 -------------------------------DYHDL------MDMTEDMISS-------- 346

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA--YIFWRLDESGNVAGMGPV 375
             V   +  + +  +   G+    D    W R     GL        +D +   A   P 
Sbjct: 347 -LVKDIHGTYKVKYQPKEGDEIEIDFSPPWPRVPMLAGLVKELAKLSIDAAWLDA---PG 402

Query: 376 AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435
           A  L     + + V    +           P        +          ++  NC    
Sbjct: 403 ALSLPDAAAKLLAVHSAAK-----IDPCQKPHTVARLVDNLVGE------LLEDNCVNPA 451

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           +I +                 +P  M                   +++L   G E+ +  
Sbjct: 452 FITE-----------------HPAEMSPLAKYHRDKP----GLTERFELFVAGKELCNAY 490

Query: 496 IRNHMSEVMLQAFSNV----GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
              +   V  + F+          +    +      A + G+PP GG   GIDR+ M L 
Sbjct: 491 TELNNPFVQRERFAAQAGDVDAGDDEAMVKDEDFCVALEHGLPPTGGWGCGIDRLTMFLS 550

Query: 552 GAKNVREVSLFPMSQ 566
              ++REV LFP  +
Sbjct: 551 NKNSIREVLLFPAMK 565


>gi|148654264|ref|YP_001274469.1| lysyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|172048100|sp|A5UPG6|SYK_ROSS1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|148566374|gb|ABQ88519.1| lysyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 489

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 67/314 (21%), Positives = 128/314 (40%), Gaps = 25/314 (7%)

Query: 5   RTHSCGDLGVS-----DVGSFVRLSGW-VHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           RTH+ G +  S     + G  V ++G  V   R  G + F  I D  G  Q+  +     
Sbjct: 31  RTHTIGFVLASFDQLMERGEQVTVAGRIVGARRILGKLAFAHIEDESGRIQIWLSRGDIG 90

Query: 59  FEIAKSVR----SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            E     R    +  ++   G +              G+  +  +++ +L+ +   P P 
Sbjct: 91  DEWFDRFRDDLDTFDIVEATGTLRRTQR---------GEPSVFVERLGVLAKSL-NPPPE 140

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS- 172
                     R + R+LDL  +   +++ + R +I+++MR  +    F+E  TP L    
Sbjct: 141 KWHGLSDIEERHRQRYLDLIVNPEVRDVFRTRAKIVSTMRRFLDERGFLEVETPTLQPIY 200

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+      +   Y L  A + Y + L+  GF+R ++I+  FR+E       P 
Sbjct: 201 GGASARPFITHHNQLKQDLY-LRIAVELYLKRLIVGGFERVYEISKVFRNEGVDRTHNP- 258

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP- 291
           EF  ++   ++ + +D++  +E++ R +  E +   T+      I +  A +R       
Sbjct: 259 EFTMMECYQAYADYNDMMRLVEDLYRTLALEVAGSTTIVFQGHTIDFGPAWQRVSIPTAI 318

Query: 292 DLRNPIIMHNVTEH 305
             R  I +  +TE 
Sbjct: 319 AARTGIDILELTEL 332



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 4/91 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAF----SNVGISKEVVENRFGGLYRAFQCGMPP 535
            +++ +  G E+ +     +      Q F           +  +        A   GMPP
Sbjct: 396 ERFEPIVAGMEVGNAFTELNDPLDQEQRFLEQGRAYDAGDDEAQQMDIDFLNALMYGMPP 455

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GG+  GIDR VML     ++REV LFP  +
Sbjct: 456 TGGLGIGIDRTVMLFTDQPSIREVILFPHMR 486


>gi|238023019|ref|ZP_04603445.1| hypothetical protein GCWU000324_02941 [Kingella oralis ATCC 51147]
 gi|237865402|gb|EEP66542.1| hypothetical protein GCWU000324_02941 [Kingella oralis ATCC 51147]
          Length = 527

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 64/297 (21%), Positives = 128/297 (43%), Gaps = 23/297 (7%)

Query: 10  GDLGVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G++   ++      V+++G +   R  G   F  ++D  G  Q+  N      E+  +  
Sbjct: 78  GEMSKEELDPQAVPVKIAGRMMLKRQMGKASFATVQDATGQIQLYLNNKGVSQEVLDAFN 137

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +  I G      AE +      G++ +   +I +LS +   PLP   +    +  ++
Sbjct: 138 HWDMGDIIG------AEGVLFKTNHGELTVRVSQIRLLSKSLR-PLPDKHKGLSDQETKY 190

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   ++  +KR++II ++R  M++E ++E  TP++        A+ F+   
Sbjct: 191 RQRYVDLIANADSRDVFIKRSKIIQAVRNFMVSEQYLEVETPMMHPIPGGATAKPFVTHH 250

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  G +R F+I   FR+ +  S R   EF  ++   +F 
Sbjct: 251 NALDIPLY-LRIAPELYLKRLVVGGLERVFEINRSFRN-EGMSVRHNPEFTMIEFYEAFC 308

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           + + ++   E+ +R      S    +  N         F R+    AI++Y     D
Sbjct: 309 DYNRMMQMAEDTIRAACRSVSGSLKIEYNGKEVDLESPFERLTILQAIKKYNPHYTD 365



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 27/171 (15%)

Query: 400 FFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF 459
               G+ L   +     +  + +  G      +   +I+D+P                  
Sbjct: 378 IVKHGESLPHAAGLGSLQLALFE--GCAESKLWNPTFIVDYP------------------ 417

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
                     + +D  +    +++L   G E+A+G    +  E     F      K+  +
Sbjct: 418 ---VEVSPLARASDSQAGLTERFELFVVGRELANGYSELNDPEDQAARFKAQVAQKDAGD 474

Query: 520 NRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +          RA + G+PP GG   GIDR+VMLL   + +R+V LFP  +
Sbjct: 475 DEAMHYDADYIRAMEYGLPPTGGCGIGIDRLVMLLTDTQTIRDVILFPQMR 525


>gi|69247321|ref|ZP_00604303.1| Asparaginyl-tRNA synthetase, class IIb [Enterococcus faecium DO]
 gi|257879983|ref|ZP_05659636.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257884121|ref|ZP_05663774.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257890492|ref|ZP_05670145.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894419|ref|ZP_05674072.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258614366|ref|ZP_05712136.1| asparaginyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260558925|ref|ZP_05831112.1| asparaginyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261209448|ref|ZP_05923811.1| asparaginyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289566625|ref|ZP_06447044.1| asparaginyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293553818|ref|ZP_06674433.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|293559763|ref|ZP_06676283.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|294616367|ref|ZP_06696160.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294622013|ref|ZP_06701156.1| asparaginyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314950178|ref|ZP_07853463.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|68194891|gb|EAN09362.1| Asparaginyl-tRNA synthetase, class IIb [Enterococcus faecium DO]
 gi|257814211|gb|EEV42969.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257819959|gb|EEV47107.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257826852|gb|EEV53478.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830798|gb|EEV57405.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260075033|gb|EEW63348.1| asparaginyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260076576|gb|EEW64340.1| asparaginyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289161566|gb|EFD09447.1| asparaginyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291590881|gb|EFF22597.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291598403|gb|EFF29477.1| asparaginyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291602024|gb|EFF32261.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291606246|gb|EFF35660.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313643488|gb|EFS08068.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 432

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/299 (24%), Positives = 118/299 (39%), Gaps = 32/299 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEW 69
             + VG  V +  WV   R  G I FL +RD         V +      F+ AK++  E 
Sbjct: 9   SKNHVGETVTIGAWVANKRSSGKIAFLQLRDGTAFFQGVVVKSEVSEEVFQTAKNLHQET 68

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G +   S             E+    +E++S + + P+     +E+       +R
Sbjct: 69  SVLVTGEIREDSRSKF-------GYEIGITNVEVVSESHDYPITP---KEHGTDFLMDHR 118

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR    H  +  R  II +        +F++   PILT S+PEG  D    +  +Q 
Sbjct: 119 HLWLRSSRQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEGTTDLFETNYFDQK 178

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F  Q++ 
Sbjct: 179 AY--LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTHQEES 235

Query: 250 LNTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPD 292
           L   E  +  + +   +                       F RI YDDAI     +  D
Sbjct: 236 LEVQEQYVAFLVQNVLDHCEYALDVLGRDKEVLKTYTKLPFPRITYDDAIELLKKNGFD 294



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 38/113 (33%), Gaps = 10/113 (8%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
              A  PF M               I    Y       EI  G  R    + +L+   N 
Sbjct: 323 YPKAIKPFYMKPHPTREDVVICADMIAPEGY------GEIIGGSERATDYDFLLEQIRNH 376

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G+ ++     +       + G  PH G   G++R V  + G  +VRE   FP 
Sbjct: 377 GLDEKE----YSWYLDLRKYGSVPHSGFGLGLERTVTWIAGIDHVREAIPFPR 425


>gi|255030480|ref|ZP_05302431.1| asparaginyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 363

 Score =  196 bits (498), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 31/294 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDIFATAKALTQETSLYV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +             E++   +E++S + + P+     +E+       +R L L
Sbjct: 72  TGTINEDTRSPF-------GYEMAVSSVEVISESHDYPITP---KEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +  H  +  R  II +       E F++   PILT S+PEG  +        + +F  
Sbjct: 122 RSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L   
Sbjct: 180 LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQVQ 238

Query: 254 ENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRYGTDKPD 292
           EN +  + +   +   +                  F RI Y +AI R      D
Sbjct: 239 ENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIERLHELGFD 292


>gi|314940159|ref|ZP_07847337.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314942424|ref|ZP_07849267.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314952300|ref|ZP_07855311.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314994257|ref|ZP_07859560.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314997172|ref|ZP_07862158.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313588746|gb|EFR67591.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313591344|gb|EFR70189.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313595559|gb|EFR74404.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313598824|gb|EFR77669.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313640598|gb|EFS05178.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133a04]
          Length = 432

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/299 (24%), Positives = 119/299 (39%), Gaps = 32/299 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEW 69
             + VG  V +  WV   R  G I FL +RD         V +      F+ AK++  E 
Sbjct: 9   SKNHVGETVTIGAWVANKRSSGKIAFLQLRDGTAFFQGVVVKSEVSEEVFQTAKNLHQET 68

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G + + S             E+    +E++S + + P+     +E+       +R
Sbjct: 69  SVLVTGEIRADSRSKF-------GYEIGITNVEVVSESHDYPITP---KEHGTDFLMDHR 118

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR    H  +  R  II +        +F++   PILT S+PEG  D    +  +Q 
Sbjct: 119 HLWLRSSRQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEGTTDLFETNYFDQK 178

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F  Q++ 
Sbjct: 179 AY--LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTHQEES 235

Query: 250 LNTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPD 292
           L   E  +  + +   +                       F RI YDDAI     +  D
Sbjct: 236 LEVQEQYVAFLVQNVLDHCEYALDVLGRDKEVLKTYTKLPFPRITYDDAIELLKKNGFD 294



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 38/113 (33%), Gaps = 10/113 (8%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
              A  PF M               I    Y       EI  G  R    + +L+   N 
Sbjct: 323 YPKAIKPFYMKPHPTREDVVICADMIAPEGY------GEIIGGSERATDYDFLLEQIRNH 376

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G+ ++     +       + G  PH G   G++R V  + G  +VRE   FP 
Sbjct: 377 GLDEKE----YSWYLDLRKYGSVPHSGFGLGLERTVTWIAGIDHVREAIPFPR 425


>gi|124265793|ref|YP_001019797.1| lysyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|166229811|sp|A2SDC3|SYK_METPP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|124258568|gb|ABM93562.1| lysyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 508

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 65/285 (22%), Positives = 117/285 (41%), Gaps = 25/285 (8%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R++G +   R  G   F  ++D  G  Q+    D+   E   + +   +  I G      
Sbjct: 74  RIAGRMMLKRVMGKACFATLQDGSGRIQLYITSDAVGPEALAAFKHWDLGDILG------ 127

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
           AE       TG++ L    I +L+ +   PLP        + ++++ R +DL  D   + 
Sbjct: 128 AEGTLFKTRTGELSLKVGTIRLLTKSLR-PLPDKFHGMADQELKYRQREVDLIMDEASRE 186

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             + R++ ++S+R  M+   F+E  TP+L        A+ F+          + L  AP+
Sbjct: 187 RFRARSKAVSSIRQFMVEHGFLEVETPMLHPIPGGANAKPFVTHHNALDQQMF-LRIAPE 245

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D+++  E +LR 
Sbjct: 246 LYLKRLVVGGFERVFEINRNFRNEGV-SVRHNPEFTMMEFYAAYWTHHDLMDFTEQILRH 304

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              +                  A   YG    DL +P    +V +
Sbjct: 305 AARKAVG--------------TAQLAYGGQAVDLESPFARLSVRD 335



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 35/172 (20%)

Query: 400 FFIAGDPLKFCSFAADARNHIAQELGI----INCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
               G+        A+       + G+    +    ++  +I+D+P              
Sbjct: 358 LEAHGEKAPAHWSLAEL------QFGLFEAAVEEKLWQPTFIVDYP-------------- 397

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
                         + +D       +++L   G E  +G    +  E     F+    +K
Sbjct: 398 -------VEVSPLARASDADPTITERFELFITGREFGNGFSELNDPEDQAARFAAQASNK 450

Query: 516 EVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +  +           RA + G+PP GG   GIDR++MLL  + N+R+V LFP
Sbjct: 451 DAGDEEAMYFDTDYIRALEHGLPPTGGCGIGIDRLMMLLTDSPNIRDVILFP 502


>gi|124484868|ref|YP_001029484.1| aspartyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|166225357|sp|A2SPG1|SYD_METLZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|124362409|gb|ABN06217.1| aspartyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 429

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 81/304 (26%), Positives = 133/304 (43%), Gaps = 26/304 (8%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCIDGLVM 78
           R++GWVH  R  GG+ FL +RD  GI QV         E+    K    E V+  +G+V 
Sbjct: 16  RIAGWVHEERDLGGLTFLLVRDRTGILQVTIPKKKVTPEVLAAVKEATRESVIECEGVVK 75

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRDT 137
           +            G  EL    + ++S AE        E+       R   R+LDLR+  
Sbjct: 76  ATEK-------APGGRELVPDMLRVVSRAETPLPLDVSEKVPAELDTRLDNRYLDLRKPR 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           ++     R   + ++   +    F +  TP + A++ EG  +    +  ++ +F  L Q+
Sbjct: 129 INAIFQIRNACLRAISEYLWDNGFTQVQTPKIVAAATEGGTELFPLAYFDKEAF--LNQS 186

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           PQ YKQ+LM++GFDR F+I   FR E+  + R   E   +D+EMSF  ++D ++ +ENV+
Sbjct: 187 PQLYKQMLMSAGFDRVFEIGAIFRAEEHNTVRHLNEATSIDIEMSFANEEDAMHVLENVV 246

Query: 258 RGVFEEFSNGN-------------TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              ++  ++                 +  F RI Y +AI         L     +    E
Sbjct: 247 ASAYQYVADHCGDALATLGITDFKVPTVPFPRITYKEAIEISTAGGEPLVFGDDLSTAAE 306

Query: 305 HFVH 308
             V 
Sbjct: 307 RIVG 310



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 73/183 (39%), Gaps = 32/183 (17%)

Query: 390 RLDMQDGDSCFFIAGDPLKFCSFAA-DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE 448
           R+  ++        G+PL F    +  A   + +++G +        +I ++P       
Sbjct: 278 RITYKEAIEISTAGGEPLVFGDDLSTAAERIVGEKMGTM-------YFITEWP------- 323

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
                 +  PF                  +A  +D++    E+ SG  R H+  ++++  
Sbjct: 324 -----TSTRPFYTMPFEDR------PEVCRA--FDMMHPRMELTSGAQRCHIHSLLVEQI 370

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
              G++     + F      F+ GMPPH G   G +R+VM +L  +N+RE  LFP  ++ 
Sbjct: 371 KAKGLNP----DAFEFYLNPFRYGMPPHAGWGLGAERLVMTMLDLQNIREAVLFPRDRHR 426

Query: 569 CDL 571
              
Sbjct: 427 VSP 429


>gi|167044234|gb|ABZ08915.1| putative tRNA synthetases class II (D, K and N) [uncultured marine
           microorganism HF4000_APKG5H11]
          Length = 509

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 67/331 (20%), Positives = 131/331 (39%), Gaps = 29/331 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGL 76
             V L+G +  +R  G   FLD++D  G+ Q +   +     F++ K++     L + G 
Sbjct: 58  QNVTLAGRITSIRDMGKAAFLDLQDASGVIQALLRQNNLKDGFDLLKNLDIGDHLGVRGN 117

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++            TGQ+ + A ++ + +     PLP           R++ R+LDL  +
Sbjct: 118 LIRT---------RTGQVTIDAMELTVTAKV-MRPLPEKWHGLKDVETRYRQRYLDLIAN 167

Query: 137 --TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYA 193
              +    V R++++  +R  +    F+E  TPIL   +    A+ F+          Y 
Sbjct: 168 QDEVMPVFVLRSKVVRGIRRFLDDRGFLEVDTPILVPVAAGAHAKPFVTHHNALDQQLY- 226

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  A + Y + L+  GFD+ ++I   FR+E    D  P EF  L+   ++ + +D++  +
Sbjct: 227 LRIATELYLKRLIIGGFDKVYEIGRVFRNEGIDQDHNP-EFTLLESYEAYADYNDVMEMV 285

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           E ++  +  E +    V+     I +    +R           + +    E     +   
Sbjct: 286 EQMVSTIAIEVNGSTKVTIGDQVIDFAPPWQR-----------VSLREELEKRSGIDLES 334

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           F          E+  I  K         D++
Sbjct: 335 FDDDALRQKAGEM-GIDTKVLESRGRLIDKL 364



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 28/149 (18%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +  +  +  +++D+P                     +      K          +++   
Sbjct: 369 VEPHLIQPTFVLDYP---------------------EEMSPLAKAKPDAPGYVERFEAFA 407

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVG-----ISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
            G EIA+     +  +V  + F            E V+ +      A + GMPP GG+  
Sbjct: 408 FGMEIANSYSELNDPKVQRERFEAQEQIQALYENEDVDRQDDDFLTAMEYGMPPTGGLGI 467

Query: 542 GIDRIVMLLLGAKNVREVSLFP--MSQNF 568
           GIDR+VMLL G +++R+V LFP   +Q  
Sbjct: 468 GIDRLVMLLAGQRSIRDVLLFPQMRTQQG 496


>gi|313205503|ref|YP_004044160.1| lysyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312444819|gb|ADQ81175.1| lysyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 575

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 137/359 (38%), Gaps = 24/359 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           + T    +    + G  V ++G +   R  G   F++++D  G  QV  + D    E   
Sbjct: 37  FSTDIKAEFKDDESGKPVCVAGRIMSRRIMGKASFVELQDSKGRIQVYVSRDDINTEAQP 96

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--- 120
            + +     +  +      +        G+I + AQ++ +LS A      V  +      
Sbjct: 97  EMYNVVFKKLLDIGDFVGIKGFVFRTQMGEISVHAQELTVLSKALRPLPIVKYKDGVAFD 156

Query: 121 ---PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
                  R++ R++DL  +  +    +KRT++  SMR    A+ +IE  TPIL +     
Sbjct: 157 AFEDPEQRYRQRYVDLVVNDGVKDIFLKRTKVYQSMRDYFNAQGYIEVETPILQSIPGGA 216

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+          Y L  A + Y + L+  GF+  ++ +  FR+E       P EF 
Sbjct: 217 SARPFITHHNALDIPLY-LRVADELYLKRLIVGGFEGVYEFSKNFRNEGMDRTHNP-EFT 274

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRRY 286
            +++ +++ + + +++  E ++  +  + +  N              F RI   DAI+ +
Sbjct: 275 AMEIYVAYKDYNWMMDFTERMIEKICLDVNGTNEITVGDKTISFKTPFKRITMIDAIKEH 334

Query: 287 -GTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            G D     N +    + E        V   +       E++    +G      F    
Sbjct: 335 TGIDI----NGMDEVQLREVCKTLHVEVDETMGKGKMIDEIFGEKCEGNYIQPTFITDY 389



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 4/93 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGM 533
              +++L+ NG E+A+     +     L  F       E  ++          R+ + GM
Sbjct: 406 LTERFELMVNGKELANAYSELNDPIDQLGRFQEQLKLSEKGDDEAMFIDMDFVRSLEYGM 465

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP  G+  G+DR+VML+ G + ++EV  FP  +
Sbjct: 466 PPTSGMGIGMDRLVMLMTGQQAIQEVLFFPQMK 498


>gi|323489716|ref|ZP_08094943.1| asparaginyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396847|gb|EGA89666.1| asparaginyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 431

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 77/329 (23%), Positives = 122/329 (37%), Gaps = 34/329 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
               G  ++L  W+   R  G I FL +RD  G  Q   V A      F  AK +  E  
Sbjct: 10  AKHNGETIKLGAWIANKRSSGKIAFLQLRDGSGFVQGVVVKAEVGDDLFATAKGLTQETS 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G V                 EL+   IE++  A++ P+     +E+        R 
Sbjct: 70  VYVTGEVKEDERSAF-------GYELAVTGIEVIHEAKDFPITP---KEHGTEFLMDNRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II S         F++   PILT SSPEG  +       ++ +
Sbjct: 120 LWLRSRKQHAIMKIRNEIIRSTYEFFNDNGFVKVDPPILTGSSPEGTSELFATKYFDEDA 179

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F+E  + L
Sbjct: 180 Y--LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFIEHVESL 236

Query: 251 NTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRY---GTDKPD 292
              E  +  + +               + S    +   F R+ YDDAI+     G D   
Sbjct: 237 EVQEQYVSYIVQSVLKNCKLELERLDRDVSKLEKIKAPFPRVSYDDAIKWLNDNGFDDIK 296

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
                   + T      +  +F     + 
Sbjct: 297 WGEDFGAPHETALAESYDMPIFITHYPIG 325



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 56/187 (29%), Gaps = 17/187 (9%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
            L +   +    +L+            D +K+ +          ++ G  +       + 
Sbjct: 255 KLELERLDRDVSKLEKIKAPFPRVSYDDAIKWLNDNGFDDIKWGEDFGAPHETALAESY- 313

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
            D P +              PF M               I    Y       EI  G  R
Sbjct: 314 -DMPIF-----ITHYPIGIKPFYMQPHPERDDVVLCADMIAPEGY------GEIIGGSER 361

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            H  E+M Q      +     E+ +       + G  PH G   G++R V  + G +++R
Sbjct: 362 IHDYELMKQRIQEHNLD----EDAYAWYLDLSKYGSVPHSGFGLGLERTVAWISGVEHIR 417

Query: 558 EVSLFPM 564
           E   FP 
Sbjct: 418 ESIPFPR 424


>gi|313637223|gb|EFS02737.1| asparaginyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 430

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 78/319 (24%), Positives = 126/319 (39%), Gaps = 34/319 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGEEVFATAKALTQETSLFV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +             E++   +E++S + + P+     +E+       +R L L
Sbjct: 72  TGTINEDTRSPF-------GYEMAVSGLEVISESHDYPITP---KEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +  H  +  R  II +       E F++   PILT S+PEG  +        + +F  
Sbjct: 122 RSNRQHAIMKIRNEIIRATYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L   
Sbjct: 180 LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLKVQ 238

Query: 254 ENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAI---RRYGTDKPDLRN 295
           EN +  + +   +   +                  F RI Y +AI    + G D     +
Sbjct: 239 ENYVAFLVKAVLDNCRLELDRLGRDISHLEKMVAPFPRITYTEAIDLLHKLGFDDIVWGD 298

Query: 296 PIIMHNVTEHFVHSEFRVF 314
                + T      E  VF
Sbjct: 299 DFGAPHETAIADSFEKPVF 317



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 40/122 (32%), Gaps = 10/122 (8%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E          A  PF MP+             I    Y       EI  G  R H  E
Sbjct: 312 FEKPVFITHYPKAIKPFYMPEDPENDQVVLCADMIAPEGY------GEIIGGSERIHDLE 365

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +     +  +     +  +       + G  PH G   G++R V  + G ++VRE   F
Sbjct: 366 TLQARMKDFDLD----QEAYSWYIDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPF 421

Query: 563 PM 564
           P 
Sbjct: 422 PR 423


>gi|289435245|ref|YP_003465117.1| asparaginyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171489|emb|CBH28033.1| asparaginyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 430

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 78/319 (24%), Positives = 126/319 (39%), Gaps = 34/319 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGEEVFAAAKALTQETSLFV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +             E++   +E++S + + P+     +E+       +R L L
Sbjct: 72  TGTINEDTRSPF-------GYEMAVSGVEVISESHDYPITP---KEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +  H  +  R  II +       E F++   PILT S+PEG  +        + +F  
Sbjct: 122 RSNRQHAIMKIRNEIIRATYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L   
Sbjct: 180 LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLKVQ 238

Query: 254 ENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAI---RRYGTDKPDLRN 295
           EN +  + +   +   +                  F RI Y +AI    + G D     +
Sbjct: 239 ENYVAFLVKAVLDNCRLELDRLGRDISHLEKMVAPFPRITYTEAIDLLHKLGFDDIVWGD 298

Query: 296 PIIMHNVTEHFVHSEFRVF 314
                + T      E  VF
Sbjct: 299 DFGAPHETAIADSFEKPVF 317



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 40/122 (32%), Gaps = 10/122 (8%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E          A  PF MP+             I    Y       EI  G  R H  E
Sbjct: 312 FEKPVFITHYPKAIKPFYMPEDPENDQVVLCADMIAPEGY------GEIIGGSERIHDLE 365

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +     +  +     +  +       + G  PH G   G++R V  + G ++VRE   F
Sbjct: 366 TLQARMKDFDLD----QEAYSWYIDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPF 421

Query: 563 PM 564
           P 
Sbjct: 422 PR 423


>gi|268325209|emb|CBH38797.1| aspartyl-tRNA synthetase [uncultured archaeon]
          Length = 437

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 83/342 (24%), Positives = 146/342 (42%), Gaps = 26/342 (7%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
               ++  ++ G  V ++GWVH  R  GG+ FL +RD  G  Q+         E+   V+
Sbjct: 14  KYTNEITAANAGERVSVAGWVHEKRDLGGVFFLIMRDLSGFAQITLPKKKVEPELFDRVK 73

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESIR 125
                     V+    E  +        E+  Q++++LS A ++ PL   G+       R
Sbjct: 74  R----VPRESVVVVEGEVKSEKKAPNGYEIIPQQMDVLSEASQVLPLDTTGKVGAELDTR 129

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              RF+DLR +      + R+  + ++R        IE +TP + +++ EG       S 
Sbjct: 130 LDARFMDLRTERTKHIFMIRSLTLRAIRDFFDERGLIEINTPKIVSAATEGGTALFPISY 189

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             + +F  L Q+PQ YKQ+LMASGFDR ++IAP FR E+  + +   E   +D+E++FV 
Sbjct: 190 FEREAF--LNQSPQLYKQILMASGFDRVYEIAPIFRAEEHDTTKHLNEATSVDVELAFVS 247

Query: 246 QDDILNTMENVLRGVFEEFSNG----------NTVSNNFLRICYDDAIR---------RY 286
             +++  +E ++  V+    +              +  F RI Y +AI           +
Sbjct: 248 DKEVMALLEELIAFVYSRVVDYPGLAKLKVTLEVPAIPFRRITYAEAIELLSGEGEQIGW 307

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           G D        +   + E +  +++    K     P  E   
Sbjct: 308 GEDIGTSAERTLGKIIGELYFITDWPCAIKPFYAQPAAEGIC 349



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 26/139 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           E  +I D+P             A  PF                      +DL+    E++
Sbjct: 325 ELYFITDWP------------CAIKPFYAQPAA----------EGICNAFDLMHPRLELS 362

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  E++ +     G+S     + F     AF+ GMPPH G   G++R++M +L 
Sbjct: 363 SGSQRVHSYELLKRQIETKGLSA----DSFEFYLDAFRYGMPPHAGWGLGVERLLMSMLE 418

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+REV LFP  +     
Sbjct: 419 IDNIREVVLFPRDRRRLTP 437


>gi|257053788|ref|YP_003131621.1| aspartyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256692551|gb|ACV12888.1| aspartyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 434

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 89/349 (25%), Positives = 149/349 (42%), Gaps = 43/349 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF---EI 61
           RT    D   +D G+   ++GWVH +R  GGI FL +RD  G  QV    D       E 
Sbjct: 4   RT-YAAD---ADPGTSATVAGWVHEIRDLGGIAFLILRDTTGKIQVKIEKDELDEALVET 59

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREY 120
           A  V  E VL ++G V             TG +E++   IE+++ A+   PL   G+ + 
Sbjct: 60  ALDVHRESVLRVEGDVEEEE------RAPTG-VEVTPDDIEVIAPADPELPLDPSGKVDA 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   R LDLR+  +      R  ++ S+R      +  E +TP + A+  EG  + 
Sbjct: 113 ELPTRLDNRTLDLRKPEVKAIFEIRAEVLRSVREAFRNLDATEINTPKIVATGTEGGTEL 172

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +   + +F    Q+PQ +KQL++ SG +R F+I P FR E+  + R   E   +D E
Sbjct: 173 FPITYFGREAFMN--QSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFE 230

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN--------------TVSNNFLRICYDDAIRR- 285
            +F +  + ++  E V++  +E  +                     +F R+ Y++AI R 
Sbjct: 231 SAFYDHTEAMDACETVVKAAYEGVAGNCADELETLGLTEVFSAPEGDFPRLTYEEAIERI 290

Query: 286 -----------YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
                      +G D        +  +V EH+  +++    K   +   
Sbjct: 291 NATGEIDDVLVWGDDLSTEAEHALGQDVGEHYFITDWPSEIKPFYIKDH 339



 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 36/187 (19%)

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYE 444
           E    R++         + GD       + +A + + Q++G       E  +I D+P   
Sbjct: 284 EEAIERINATGEIDDVLVWGD-----DLSTEAEHALGQDVG-------EHYFITDWP--- 328

Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
                        PF         +K +D     +  +D++    E+ SGG R H  + +
Sbjct: 329 ---------SEIKPFY--------IKDHDDDPELSTGFDMMHPSMELVSGGQREHRHDHL 371

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           ++ F   G+        F    + F+ GMPPH G   G +R+VM +LG +N+RE  +FP 
Sbjct: 372 VEGFEQQGLDPGA----FEYYTKMFKYGMPPHAGWGLGGERLVMTMLGLENIREAVIFPR 427

Query: 565 SQNFCDL 571
            +     
Sbjct: 428 DRQRLSP 434


>gi|313895695|ref|ZP_07829251.1| lysine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975821|gb|EFR41280.1| lysine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 503

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 63/288 (21%), Positives = 117/288 (40%), Gaps = 20/288 (6%)

Query: 2   HRYR-THSCGDLGVS-------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           HR+  T     +          + G  VR++G +  +R HG   F  + D  G  Q+   
Sbjct: 40  HRFEVTDYAAQIRAQYDGLGEDEEGGEVRIAGRLMAIRGHGKASFSTLNDRTGNIQIYFK 99

Query: 54  PDSACFEIAKS-VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
            D    +  K   +   +  I G+        +      G++ +  +  ++LS +   PL
Sbjct: 100 QDVLGEKKYKEEFKRLDIGDIIGIC------GVVFKTRRGEVTVRVEDFDLLSKSLR-PL 152

Query: 113 PVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-T 170
           P           R++ R+LDL  +  +     KR +II S+R  +   +F+E  TP+L T
Sbjct: 153 PEKFHGLKDVDTRYRQRYLDLMVNYEVRDTFRKRAKIIRSIRSYLDERDFLEVETPVLST 212

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +    AR F+          Y L  A +   + L+  G DR +++   FR+E       
Sbjct: 213 IAGGAAARPFITHHNALDIDLY-LRIATELSLKRLIVGGLDRVYEMGRIFRNEGMDVRHN 271

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
           P EF  +++  +F +  D++   E ++R   E+      ++   + I 
Sbjct: 272 P-EFTSIEIYQAFGDYRDLMEITEGIVRRTAEDVLGTTKITYQGVEID 318



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 7/176 (3%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
             D+     G     C+   +AR  +A+E+G+          I++  F E  EE   +  
Sbjct: 327 MNDAVCEATGRDFLSCTTVDEAR-AMAKEIGVPFEERHGIGGILNAAFEEKVEET--LIQ 383

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
                  P       K N        +++    G E+A+G    +      Q F +    
Sbjct: 384 PTFITGHPTEISPLAKRNPDDPRITDRFEFFVYGRELANGFTELNDPIDQEQRFIDQLAQ 443

Query: 515 KEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +E  +            A + G+PP GG+  GIDR+VMLL  + ++R+V LFP  +
Sbjct: 444 REAGDAEAHVMDRDYVTALEYGLPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPTMK 499


>gi|86608981|ref|YP_477743.1| lysyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557523|gb|ABD02480.1| lysyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 511

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 65/340 (19%), Positives = 125/340 (36%), Gaps = 32/340 (9%)

Query: 6   THSCGDLGVSDV-----GSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           TH   +L          G      V ++G +   R  G + F  ++D  G  Q+  +   
Sbjct: 38  THLAAELQEQFADLEPGGEREDVQVAVAGRIRARRVMGKLAFFTLQDRSGTIQLYLDKKR 97

Query: 57  ACFEIAK-SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
              ++ + + ++   L   G  +             G++ +   + ++L+ A  LPLP  
Sbjct: 98  LTEQMGELAFKNLDKLIDVGDWLGAKGCLKRTE--KGELSVRVDEYQVLTKAL-LPLPDK 154

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSP 174
                    R++ R++DL  +   K  +  R +II S+R  +    F+E  TP+L     
Sbjct: 155 WHGLRDVEKRYRQRYVDLIVNPEVKQTLLDRAQIIRSLRQTLEERGFVEIETPVLQVIPG 214

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 215 GAEARPFVTHHNALDLDLY-LRIATELHLKRLVVGGIERVYEIGRVFRNEGISTRHNP-E 272

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  L+   +F +   ++   E ++            ++     I      RR        
Sbjct: 273 FTSLEAYQAFADYHTMMELTETLVCNAALAVRGSLQLTYQGEAIDLTPPWRR-------- 324

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
              + M  + E        +F  +    P   + A+ A+G
Sbjct: 325 ---VTMQELVEEATG----IFIDVEKGCPEELLPALAAQG 357



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 4/93 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQ 530
               A +++L   G E A+            Q        K   +     L      A +
Sbjct: 406 KPGLAERFELFIVGRETANAYSELTDPVDQRQRLEAQAALKAAGDEEAHFLDEDFLTALE 465

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+PP GG+  GIDR+VMLL  A ++R+V  FP
Sbjct: 466 YGLPPTGGLGVGIDRLVMLLCDAPSIRDVIAFP 498


>gi|87123221|ref|ZP_01079072.1| Lysyl-tRNA synthetase, class-2:tRNA synthetases, class II
           [Synechococcus sp. RS9917]
 gi|86168941|gb|EAQ70197.1| Lysyl-tRNA synthetase, class-2:tRNA synthetases, class II
           [Synechococcus sp. RS9917]
          Length = 501

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 66/326 (20%), Positives = 127/326 (38%), Gaps = 42/326 (12%)

Query: 6   THSCGDLGVSDV----GSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           +H    L         G      V ++G V   R  G + F  + D  G  Q+     S 
Sbjct: 30  SHRTAQLQADHADLANGEERQLEVAVAGRVMTRRVMGKLAFFTLADASGPIQLFLEKASL 89

Query: 58  CFEIAKS---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
               A+    V +   + + G++              G++ +   + ++L+ A + PLP 
Sbjct: 90  GDAFAQLTSLVDAGDWIGVRGILRRTDR---------GELSVKVAEWQMLTKALQ-PLPD 139

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAENFIECSTPILTASS 173
                     R++ R+LDL      +   +R   +++++R  +   +F+E  TP+L A +
Sbjct: 140 KWHGLADVEKRYRQRYLDLIVSPQSRETFRRRALMVSAIRRWLDDRDFLEIETPVLQAEA 199

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + + L+  GF+R +++   FR+E   +   P 
Sbjct: 200 GGAEARPFITHHNTLDLPLY-LRIATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP- 257

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ +  D++N  E ++  V E+            RI        Y     D
Sbjct: 258 EFTSVEVYQAYADYVDMMNLTEQLIASVTEQICGTT-------RIT-------YQGTAVD 303

Query: 293 LRNP---IIMHNVTEHFVHSEFRVFS 315
           L  P     MH + +     +F  F+
Sbjct: 304 LTPPWRRATMHELVQEATGLDFTAFT 329



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPP 535
            +++L   G E A+            Q   +    +   ++          +A + GMPP
Sbjct: 401 ERFELFIVGRETANAFSELIDPLDQRQRLEDQQARRAAGDDEAHGVDEDFLQALEVGMPP 460

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG+  GIDR+VMLL  + ++R+V  FP
Sbjct: 461 TGGLGIGIDRLVMLLTDSASIRDVIAFP 488


>gi|259047581|ref|ZP_05737982.1| lysine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259035772|gb|EEW37027.1| lysine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 501

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 60/334 (17%), Positives = 130/334 (38%), Gaps = 25/334 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+++G +   R  G   F  I+D  G  Q+    D+   +  +      +    G ++ 
Sbjct: 65  TVQIAGRMMTKRGKGKAGFAHIQDGKGQIQIYVRKDAVGDDAYEVFTKADL----GDIVG 120

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                +  N  TG++ + A++   L+ A   PLP           +++ R+LDL  +   
Sbjct: 121 VVGTVMVTN--TGELSVKAEQFVHLTKALR-PLPDKYHGLTNVEQQYRQRYLDLISNRDS 177

Query: 140 K-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQA 197
               V R++II  +R  +   +++E  TP+L   +    AR F+          Y +  A
Sbjct: 178 FDRFVTRSKIIREIRRYLDDRDYLEVETPVLHTLAGGANARPFITHHNALDMELY-MRIA 236

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  D+++  E ++
Sbjct: 237 TELHLKRLVVGGMERVYEIGRVFRNEGIDTTHNP-EFTSIEIYTAYTDYKDVMDLTEGII 295

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
             V E+                   +  YG  + +L+ P    ++ +         F   
Sbjct: 296 SDVAEKVLGTT--------------LVPYGEHEVELKAPWKRIHMVDAIKEVTGVDFWPH 341

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           ++      +          +  F   +NE+  + 
Sbjct: 342 MTDEEARAIAKEKGVKVEDSMTFGHVVNEFFETF 375



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 6/154 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IA+E G+   +   F  +++  F+E   EE  I      +  P       + ND    
Sbjct: 348 RAIAKEKGVKVEDSMTFGHVVN-EFFETFVEETLIQPT-FIYGHPVEVSPLARKNDEDPR 405

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGM 533
              +++      E  +G           + F      K    +          +A + G+
Sbjct: 406 FTDRFECFICTKEYGNGFTELTDPIDQRERFMKQVEEKSAGNDEAHPHDEDFIQALEYGL 465

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            P GG+  GIDR+VMLL  ++++R V LFP  +N
Sbjct: 466 SPTGGVGIGIDRLVMLLTNSQSIRNVLLFPTMKN 499


>gi|149174859|ref|ZP_01853483.1| asparaginyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148846196|gb|EDL60535.1| asparaginyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 463

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 73/378 (19%), Positives = 131/378 (34%), Gaps = 58/378 (15%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC---FE 60
           RT     L  S  G  +++ GWV   R    G  F+++ D   +  +    D       +
Sbjct: 3   RTKIKSALHTSQPGETIKVCGWVRTRRDSKSGFSFVELNDGSCMANLQIVLDQNVPNYEK 62

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + K + +   L + G V+    +         +IE+ A+  ++   A+    P+  +R  
Sbjct: 63  LIKDLTTGSSLSVTGKVIESPGKN-------QRIEIHAEAFDLYGSADAETYPLQKKRHS 115

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +   L  R +T       R     ++     +  FI   TPI+T S  EGA + 
Sbjct: 116 FEFLR-EIAHLRPRTNTFGAITRVRNEAATAIHRFFQSRGFIYIQTPIITTSDCEGAGEM 174

Query: 181 LVPSRVNQG-------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDED 224
              + +N                F+    +     Q +  + A+     +   P FR E+
Sbjct: 175 FQVTTLNLDRLAQVQTEIDFSQDFFGKRASLTVSGQLEAEIFATSIGDCYTFGPTFRAEN 234

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG----------------- 267
             + R   EF+ ++ EM F +  D +   E+ +R V  +                     
Sbjct: 235 SNTTRHLAEFWMIEPEMPFYDLQDNMALAESFVRDVISDVLENCAEDMVFFNQRIDKTTL 294

Query: 268 ----NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN---------VTEHFVHSEFRVF 314
               N   N F+RI Y +AI    +       PI   +         +TE        V+
Sbjct: 295 ETLRNITENEFIRISYTEAIEIVKSSGKKFDFPIEWGSDMQSEHERFLTEEHFKQPVIVY 354

Query: 315 SKILSVNPGYEVWAIPAK 332
           +   ++ P Y       K
Sbjct: 355 NYPKTIKPFYMRCNDDGK 372



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 66/213 (30%), Gaps = 42/213 (19%)

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------RNHIAQELGIINCNCFE 433
                + I   L+    D  FF             +       R    + + I+  +  +
Sbjct: 264 ESFVRDVISDVLENCAEDMVFFNQRIDKTTLETLRNITENEFIRISYTEAIEIVKSSGKK 323

Query: 434 FCWIMDFPFYEW-----NEEEKKIDFAHN--------------PFTMPQGGMESLKGNDL 474
           F    DFP  EW     +E E+ +   H               PF M        + ND 
Sbjct: 324 F----DFPI-EWGSDMQSEHERFLTEEHFKQPVIVYNYPKTIKPFYM--------RCNDD 370

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
                    LV    EI  G  R    ++++      G++       +       + G  
Sbjct: 371 GKTVCAMDVLVPGVGEIIGGSQREERYDILIDRMKEGGLNP----EDYWWYTDLRKYGTV 426

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PH G   G +R++ L+    N+R+   FP +  
Sbjct: 427 PHSGFGLGFERLIQLITSMTNIRDCIPFPRTPK 459


>gi|157273325|gb|ABV27224.1| asparaginyl-tRNA synthetase [Candidatus Chloracidobacterium
           thermophilum]
          Length = 438

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 69/292 (23%), Positives = 127/292 (43%), Gaps = 30/292 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWV 70
            + +G  V + GW++  R  G I+FL+IRD  GI Q +   ++   E+   A+S+  E  
Sbjct: 11  ATHLGEEVVIKGWLYNARSSGKILFLEIRDGSGIVQGIVAKNAVSEEVWERAESLTQESS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G                G  EL  + + I+ +  + P+     +E+       +R 
Sbjct: 71  IIVTGTPREHPKR-------PGVYELDVRDLTIVQLTHDYPITP---KEHGIEFLMDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  ++ ++R  +  + FI   TPILT ++ EG          ++G 
Sbjct: 121 LWLRSKRQHAILRVRHEVVRAVRDFLDNDGFILADTPILTPAACEGTTTLFELDYFDEGK 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q+ Q Y +   A+ F + +   P FR E  ++ R   EF+ ++ E+++   DD++
Sbjct: 181 AY-LTQSGQLYNE-ATAAAFGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVAYATLDDMM 238

Query: 251 NTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYG 287
              E  L  + E               + S    ++  F R+ YD+A++   
Sbjct: 239 VLAERFLCFIVERILERRKEELTLLERDISKLEAIAPPFPRLSYDEAVQMLH 290



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            R    + + Q  +   + +      F       + G  PH G   GI+R V  L G ++
Sbjct: 367 QRMQSYDRLAQRIAEHNLPR----EAFEWYLDLRRYGTVPHAGFGMGIERCVAWLCGLEH 422

Query: 556 VREVSLFPMS 565
           VRE   FP  
Sbjct: 423 VRETIPFPRM 432


>gi|299820637|ref|ZP_07052526.1| lysine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299817658|gb|EFI84893.1| lysine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 498

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 67/365 (18%), Positives = 135/365 (36%), Gaps = 28/365 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +   R  G + F  I+D +   Q+    D+   +     +   +  I G+     
Sbjct: 64  SVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDNVGEDAYAVFKLADLGDIIGI----- 118

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
            +       TG++ + A+   +LS +   PLP           R++ R+LDL  +    K
Sbjct: 119 -KGTVFRTNTGELSVKAEAFTLLSKSLR-PLPDKYHGLKDVEQRYRQRYLDLITNDESQK 176

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             V R++I+  +R  M  E+++E  TP+L T      A+ F+          Y L  A +
Sbjct: 177 RFVMRSKILRYIREYMDKEDYLEVETPVLHTIPGGAAAKPFITHHNALDMDLY-LRIALE 235

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + L+  G D+ ++I   FR+E   +   P EF  L+   +F   +D++  +E ++  
Sbjct: 236 LHLKRLIVGGMDKVYEIGRVFRNEGISTRHNP-EFTMLESYAAFENYEDVMELVEGLVAY 294

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           V E+                      Y  D       + M +  + +   +F        
Sbjct: 295 VSEKLHG-----------TTKIQYGEYEVDLTPKWRRLHMADAVKEYAGVDFWTVKTDEE 343

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
                +   +       +  +   +NE+  +  +  L    +     G+   + P+AK  
Sbjct: 344 AKALAKEHNVAI---TEHMTYGHILNEFFETFVEEKLIQPTFVY---GHPVEISPLAKKN 397

Query: 380 NIVNT 384
                
Sbjct: 398 KEDER 402



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + K  +       +++L   G E A+     +  
Sbjct: 368 FFETFVEEKLIQPTFVYGHPVEISPLAKKNKEDERF-TDRFELFIVGREHANAFSELNDP 426

Query: 502 EVMLQAF----SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               Q F           +   +       + + G+PP GG+  GIDR+VMLL  A ++R
Sbjct: 427 IDQRQRFEGQVKEREQGNDEAHSMDEDFLESLEYGLPPTGGLGIGIDRLVMLLTNAPSIR 486

Query: 558 EVSLFPMSQNF 568
           +V LFP  ++ 
Sbjct: 487 DVLLFPTMKHR 497


>gi|218247934|ref|YP_002373305.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|257060743|ref|YP_003138631.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|218168412|gb|ACK67149.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|256590909|gb|ACV01796.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 463

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 138/378 (36%), Gaps = 61/378 (16%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSE 68
           L        + + GWV   R      F+++ D   +  +    D+      E+ K + + 
Sbjct: 10  LRHGQPDDTITVQGWVRTKRELKEFTFIEVNDGSSMANIQVVLDATLPNYEEVLKRLNTG 69

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G ++    +         +IE+ A  I++   ++    P+  +R   E +R   
Sbjct: 70  ASVEVLGTLVPSPGKG-------QRIEVKASSIQVYGESDPETYPLQKKRHSFEFLR-TI 121

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +TL   +  R     ++       +FI   TPI+TAS  EGA +    +  + 
Sbjct: 122 GHLRSRTNTLGAVMRVRNACATAIHRFFQERDFIWVHTPIITASDCEGAGELFTVTSFDL 181

Query: 189 --------------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q +  +MA  F   +   P FR E+  + R  
Sbjct: 182 SKIPQTQEKTVDYSQDFFGKRAYLTVSGQLEAEVMAMAFQNVYTFGPTFRAENSNTSRHL 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTV 270
            EF+ ++ EM+F + +      E  L+ +F+          EF N            N +
Sbjct: 242 AEFWMVEPEMAFCDLEGDQELAEAFLKYIFKFVLETCSEDMEFFNERIDKSVLETANNII 301

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           +N F RI Y +A++           P+   +   +EH  +    +F K L          
Sbjct: 302 NNEFERITYTEAVKLLEKADRQFEYPVEWGIDLQSEHERYLAEELFKKPL---------- 351

Query: 329 IPAKGGGGNRAFCDRMNE 346
           I      G +AF  R+NE
Sbjct: 352 IVTNYPAGIKAFYMRLNE 369



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 77/233 (33%), Gaps = 36/233 (15%)

Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398
           AF   + ++        + +   R+D+S        +  +              ++  D 
Sbjct: 265 AFLKYIFKFVLETCSEDMEFFNERIDKSVLETANNII--NNEFERITYTEAVKLLEKADR 322

Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
            F    +        ++   ++A+EL        +   + ++P                 
Sbjct: 323 QFEYPVEWGI--DLQSEHERYLAEELFK------KPLIVTNYP------------AGIKA 362

Query: 459 FTMP-QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           F M      +++   D+L+ K           EI  G  R    EV+ Q    +GI +E 
Sbjct: 363 FYMRLNEDDKTVAAMDVLAPKIG---------EIIGGSQREERLEVLQQRIQKLGILEED 413

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +           + G  PH G   G +R+V  + G  N+R+V  FP +    D
Sbjct: 414 IW----WYLDLRRYGTVPHAGFGLGFERLVQFMTGMGNIRDVIPFPRTPLSAD 462


>gi|319792237|ref|YP_004153877.1| lysyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315594700|gb|ADU35766.1| lysyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 520

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 65/325 (20%), Positives = 127/325 (39%), Gaps = 28/325 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q+    D+   E     +   +  I G     
Sbjct: 82  VSVAGRMMLKRVMGKASFATLQDATGRIQLYVTRDAVGEEAYAEFKRWDLGDILG----- 136

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
            AE       TG++ +   K+ +L+ +   PLP        +  +++ R++DL  D   +
Sbjct: 137 -AEGTLMKTKTGELSVKVTKLRLLTKSLR-PLPGDFYGMADQEQKYRQRYVDLITDEAAR 194

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
                R++ ++++R  M+A +F+E  TP+L        A+ F           + L  AP
Sbjct: 195 VRFTARSKAVSALREFMVANDFLEVETPMLHPIPGGANAKPFKTHHNALDQEMF-LRIAP 253

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   +R+E   S R   EF  ++   ++    D+++  E ++R
Sbjct: 254 ELYLKRLIVGGFERVFEINRSYRNEGI-SVRHNPEFTMMEFYAAYWNYRDLMDFTETLIR 312

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH---FVHSEFRVFS 315
            + ++      ++              YG    DL  P     + E       +   V  
Sbjct: 313 TIADKAVGSQQLT--------------YGGKPVDLSQPFERLTIREAILKHTDAGDGVDD 358

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAF 340
               +N   ++     K     R+ 
Sbjct: 359 TAWLINGLRKLGLSEEKDKLSQRSL 383



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           ++E   EEK        F M      S   + ND       +++L   G E  +G    +
Sbjct: 390 YFEETVEEKLWQPT---FIMEHPTEISPLARANDERPEVTERFELYITGREFGNGFSELN 446

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            +E     F+    +K+  ++          RA + GMPP GG   GIDR++MLL  + +
Sbjct: 447 DAEDQAARFNAQVAAKDSGDDEAMYYDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSPS 506

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 507 IRDVILFP 514


>gi|306827767|ref|ZP_07461039.1| lysine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304430085|gb|EFM33122.1| lysine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 497

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/332 (18%), Positives = 123/332 (37%), Gaps = 26/332 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L             ++     ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSAELKEKYADKTKEELHELNETAIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   +  +  +   +    G  +    E +  ++  G++ + A K+  LS +   PLP 
Sbjct: 97  DSVGEDNYEIFKKADL----GDFIGVEGEVMRTDM--GELSIKATKLTHLSKSLR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R LDL  +       V R+++I+ +R  +   +F+E  TP+L   +
Sbjct: 150 KFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    V     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI+N  E +++   +       +      I  ++  +R        
Sbjct: 269 FTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFKRVHMVDA-- 326

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                +  VT      E  V   I        
Sbjct: 327 -----IKEVTGVDFWPEMTVEEAIALAKEKQV 353



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      F  P       K N   +    +++L     E A+   
Sbjct: 365 IINAFFEEFVEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 423 ELNDPIDQLSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTN 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 TTTIRDVLLFPTMK 496


>gi|298694745|gb|ADI97967.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 430

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 76/322 (23%), Positives = 122/322 (37%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G  Q   V +      F++AK +  E  
Sbjct: 9   KDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVGEEVFKLAKEITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +   +         E+  + IE++S A + P+     + +       +R 
Sbjct: 69  LYVTGTITEDNRSDL-------GYEMQVKSIEVISEAHDYPITP---KNHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  +I +       + F +   PILTAS+PEG  +       +Q +
Sbjct: 119 LWLRSKKQHAVMKIRNEVIRATYEFFSKDGFTKVDPPILTASAPEGTSELFHTKYFDQDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 179 F--LSQSGQLYLEAA-AMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESL 235

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  V +       +                  F RI YDDAI      G D  +
Sbjct: 236 EIQEQYVTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T    H +  VF
Sbjct: 296 WGEDFGAPHETAIANHYDLPVF 317



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 31/194 (15%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE---- 433
            L +   E    +L+            D ++F            ++ G  +         
Sbjct: 254 KLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHYD 313

Query: 434 -FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFE 490
              +I ++P                PF M       E++   DL++ + +         E
Sbjct: 314 LPVFITNYP------------TKIKPFYMQPNPENEETVLCADLIAPEGYG--------E 353

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R    E++ Q     G+     E  +       + G  PH G   G++R V  +
Sbjct: 354 IIGGSERVDDLELLEQRVKEHGLD----EEAYSYYLDLRRYGSVPHCGFGLGLERTVAWI 409

Query: 551 LGAKNVREVSLFPM 564
            G ++VRE + FP 
Sbjct: 410 SGVEHVRETAPFPR 423


>gi|254468124|ref|ZP_05081530.1| lysyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207086934|gb|EDZ64217.1| lysyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 503

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/289 (21%), Positives = 118/289 (40%), Gaps = 16/289 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            + +    V ++G +   R  G   F  I+D  G  Q+    D    E    + S +   
Sbjct: 56  TLEEKNIEVVVAGRMMLKRVMGKASFATIQDRTGRIQLYVARDLINNEDNPELYSSFKKW 115

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G ++    +    N  T ++ +   +I +L+ +   P+P        + ++++ R++D
Sbjct: 116 DMGDIIGAKGKLFKTN--TDELTIEVTEICLLTKSLR-PMPEKFHGLQDQEMKYRQRYVD 172

Query: 133 LRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   K+    R++ I S+R  M++  F+E  TP+L        A+ F+         
Sbjct: 173 LMVNQETKDTFLTRSKAIQSIREFMVSNKFLEVETPMLHPIPGGASAKPFVTHHNALDME 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + +  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++   ++ +   ++
Sbjct: 233 MF-MRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SVRHNPEFTMMEFYAAYADYQWLM 290

Query: 251 NTMENVLR----GVFEEFS-----NGNTVSNNFLRICYDDAIRRYGTDK 290
              E+ +R    G   +            S  F R+    AI +Y    
Sbjct: 291 TFTEDCIRSSITGCGVDLKLTYQDKEIDFSQPFDRLTLVQAIEKYNNQF 339



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 63/168 (37%), Gaps = 27/168 (16%)

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
            G+ L         +  + +   +   + +   +I+D+P                     
Sbjct: 357 MGEELPPNRSLGSLQLALFEV--VAEEHLWNPTFIIDYP--------------------- 393

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
                  + +D       +++L   G EIA+G    +  E   + F      KE  ++  
Sbjct: 394 TEVSPLARASDNDPTITERFELFIAGREIANGFSELNDPEEQSERFKKQVEQKEAGDDEA 453

Query: 523 GGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                   RA + GMPP GG   GIDR++ML+    ++R+V LFP  +
Sbjct: 454 MYYDADFIRALEYGMPPTGGCGIGIDRLIMLITNKPSIRDVILFPHMR 501


>gi|311747795|ref|ZP_07721580.1| lysine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126575786|gb|EAZ80096.1| lysine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 568

 Score =  196 bits (497), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 64/327 (19%), Positives = 128/327 (39%), Gaps = 21/327 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             + ++G +   R  G   F +I+D  G  Q+    D  C E  K++ +     + G+  
Sbjct: 52  KSISIAGRLMSRRIMGSASFAEIQDSTGRLQIYVRRDDICTEEDKTLYNTVFKKLLGIGD 111

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKYRFL 131
               +       TG+I L   ++ +LS + +    V  + +           +R++ R++
Sbjct: 112 FIGVKGYIFTTQTGEISLHVTELTLLSKSVKPLPVVKRDEDGNVHDGFTDPELRYRQRYV 171

Query: 132 DL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL     +      R++II++MR       ++E  TPIL A      AR F         
Sbjct: 172 DLTVNPEVKATFKTRSKIISTMRRYFDDHGWLEVETPILQAVHGGAAARPFATHHNTLDM 231

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             + L  A + Y + L+  GFD  ++    FR+E       P EF  +++ +++ +   +
Sbjct: 232 PLF-LRIANELYLKRLIVGGFDGVYEFGKMFRNEGMDRTHNP-EFTSMEIYVAYKDYVWM 289

Query: 250 LNTMENVLRGVFEEF---------SNGNTVSNNFLRICYDDAIRRY-GTDKPDLRNPIIM 299
           +  +E ++  V E           +N    +  + R+   D+I+ Y G D   +    + 
Sbjct: 290 MEMVEELIEQVTESIHGKTKIKVGANEIEFAGPYRRLTMYDSIKEYAGIDVSKMDEEGLR 349

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEV 326
              +E  +  +  +    L      E 
Sbjct: 350 KVCSEMGIAVDDSMGKGKLVDEIFGEK 376



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQ 530
                 +++L  NG EIA+     +      + F +        ++          RA +
Sbjct: 404 EPGLVERFELFVNGKEIANAYTELNDPIDQRERFEDQLKLAARGDDEAMAMDTDFLRALE 463

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GMPP  G+  GIDR+ MLL     ++EV  FP  +
Sbjct: 464 YGMPPTSGLGIGIDRLTMLLTNKTTIQEVLFFPQMR 499


>gi|90408625|ref|ZP_01216779.1| asparaginyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310269|gb|EAS38400.1| asparaginyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 466

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 69/424 (16%), Positives = 137/424 (32%), Gaps = 58/424 (13%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           +GS V + GW+   R    GI FL I D      + A   +     +  V S       G
Sbjct: 16  IGSQVTVKGWIRTRRDSKAGISFLAIYDGSCFDPIQAVVPATLENYSNDVLS----LTAG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + E + +       E+ A K+ ++   ++        + +      ++  L  R 
Sbjct: 72  CSVEVTGELVESPGKGQSFEIQATKVVVVGFVQDPDTYPMSAKRHSIEYMREHAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +        R  + +++        F   STPI+T S  EGA +    S ++  +     
Sbjct: 132 NMFGAVTRVRNCLSHAIHNFFYERGFNWISTPIITGSDCEGAGEMFRVSTLDLENLPKTA 191

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                YKQ                    A      +   P FR E+  + R   EF+ ++
Sbjct: 192 DGKVDYKQDFFGKETFMTVSGQLNAETYACALSNVYTFGPTFRAENSHTTRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + +D+    E++L+ VF+                          N ++++F+R+
Sbjct: 252 PEIAFADLNDVAQLAEDMLKYVFKAVLEERADDMAFFAQRVDKEAISRLENMINSDFVRM 311

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y +AI        D   P+            + +   +            I        
Sbjct: 312 DYSEAIEILENCGQDFEYPVKW--------GVDLQSEHERYLAEKHVGAPIILQNYPKDI 363

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           +AF  ++N         G       +   G    +G   +  N+   +     + +   D
Sbjct: 364 KAFYMKLN-------ADGKTVAAMDVIAPGIGEIIGGSQREENLEALDKRLAEMGLNKDD 416

Query: 398 SCFF 401
             ++
Sbjct: 417 YSWY 420



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D++  G  EI  G  R    E + +  + +G++K    + +       + G  PH G   
Sbjct: 381 DVIAPGIGEIIGGSQREENLEALDKRLAEMGLNK----DDYSWYRDLRKYGTVPHAGFGL 436

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G +R+V  + G +N+R+V  FP +    D
Sbjct: 437 GFERLVSYVTGVQNIRDVIAFPRAPGSAD 465


>gi|313632667|gb|EFR99644.1| asparaginyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 430

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 78/319 (24%), Positives = 126/319 (39%), Gaps = 34/319 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGEEVFAAAKALTQETSLFV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +             E++   +E++S + + P+     +E+       +R L L
Sbjct: 72  TGTINEDTRSPF-------GYEMAVSGLEVISESHDYPITP---KEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +  H  +  R  II +       E F++   PILT S+PEG  +        + +F  
Sbjct: 122 RSNRQHAIMKIRNEIIRATYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L   
Sbjct: 180 LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLKVQ 238

Query: 254 ENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAI---RRYGTDKPDLRN 295
           EN +  + +   +   +                  F RI Y +AI    + G D     +
Sbjct: 239 ENYVAFLVKAVLDNCRLELDRLGRDISHLEKMVAPFPRITYTEAIDLLHKLGFDDIVWGD 298

Query: 296 PIIMHNVTEHFVHSEFRVF 314
                + T      E  VF
Sbjct: 299 DFGAPHETAIADSFEKPVF 317



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 40/122 (32%), Gaps = 10/122 (8%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E          A  PF MP+             I    Y       EI  G  R H  E
Sbjct: 312 FEKPVFITHYPKAIKPFYMPEDPENDQVVLCADMIAPEGY------GEIIGGSERIHDLE 365

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +     +  +     +  +       + G  PH G   G++R V  + G ++VRE   F
Sbjct: 366 TLQARMKDFDLD----QEAYSWYIDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPF 421

Query: 563 PM 564
           P 
Sbjct: 422 PR 423


>gi|187478019|ref|YP_786043.1| lysyl-tRNA synthetase [Bordetella avium 197N]
 gi|115422605|emb|CAJ49130.1| lysyl-tRNA synthetase [Bordetella avium 197N]
          Length = 504

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 66/286 (23%), Positives = 121/286 (42%), Gaps = 20/286 (6%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D    V+++G +   R  G   F  ++D  G  Q+     S   E+  + +   +    G
Sbjct: 59  DAAVRVKVAGRMMLKRVMGKASFATLQDGSGRIQLYLERGSLGEEVYAAFKQWDI----G 114

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR- 134
            +++        N   G++ + A    +LS +   PLP        + +R++ R++DL  
Sbjct: 115 DIIAIEGTMFKTN--KGELSVHATSARLLSKSLR-PLPDKFHGVSDQELRYRQRYVDLIM 171

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
            D+  +    R++ I  +R  M+A +F+E  TP+L        A+ F+          Y 
Sbjct: 172 TDSTRRTFEARSKAIGGIRQAMLAADFLEVETPMLHPIPGGAAAKPFVTHHNALDMEMY- 230

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++   ++ E   I++  
Sbjct: 231 LRIAPELYLKRLVVGGFDRVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYAEYRWIMDFT 289

Query: 254 ENVLR---------GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           E+++R          V         +S  F R+   +AI ++    
Sbjct: 290 ESLIRQAAITATGSAVLTYQERELDLSKPFARLTICEAILKHAPHY 335



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 62/162 (38%), Gaps = 27/162 (16%)

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
           P+   +     +  + +E        +E  +I+D+P                        
Sbjct: 360 PVLARAGVGALQLALFEE--TAESKLWEPTFIVDYP---------------------VEV 396

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF--- 522
               + +D       +++L   G EIA+G    +  E     F     +K+  +      
Sbjct: 397 SPLARASDTREGITERFELFITGREIANGFSELNDPEDQAARFQAQVEAKDAGDEEAMYF 456

Query: 523 -GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                RA + GMPP GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 457 DADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVILFP 498


>gi|222152758|ref|YP_002561935.1| lysyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|222113571|emb|CAR41394.1| lysyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 496

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 72/357 (20%), Positives = 131/357 (36%), Gaps = 33/357 (9%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L           + D+     ++G +   R  G + F  I+D  G  Q+    
Sbjct: 37  RTATSAELINQFADKSKEELHDLEETAIIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRK 96

Query: 55  D---SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
           D      +EI K       L ++G +M             G++ + A K+  LS A   P
Sbjct: 97  DAVGDENYEIFKKADLGDFLGVEGDIMRTD---------MGELSIKATKLTHLSKALR-P 146

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP            ++ R LDL  +       V R+++I+ +R  +   NF+E  TP+L 
Sbjct: 147 LPEKFHGLTDIETIYRKRHLDLISNRDSFNRFVTRSKMISEIRRYLDGLNFLEVETPVLH 206

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
             +   A    +     Q     L  A + + + L+  G +R ++I   FR+E   +   
Sbjct: 207 NEAGGAAARPFITHHNAQNMDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHN 266

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  +++  ++ +  DI+N  E +++   +       +      I  ++  +R     
Sbjct: 267 P-EFTTIEVYQAYADFQDIMNLTEGIIQHAAKAVKGDGPIEYQGQVIKINEPFKRIHMVD 325

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKI-LSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                   +  VT      E  V   I L+      +       G    AF +   E
Sbjct: 326 A-------IKEVTGVDFWKEMTVEEAIQLAQEKHVPLEKHFTSVGHIINAFFEEFVE 375



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      F  P       K N   +    +++L     E A+   
Sbjct: 365 IINAFFEEFVEET--LIQPTFVFGHPVEVSPLAKKNPEDNRFTDRFELFIVTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 423 ELNDPIDQLSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTD 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 TTTIRDVLLFPTMK 496


>gi|158335177|ref|YP_001516349.1| asparaginyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158305418|gb|ABW27035.1| asparaginyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 463

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 73/381 (19%), Positives = 135/381 (35%), Gaps = 45/381 (11%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L     G  +++ GWV   R      FLD+ D   +  +    +    E  ++++    L
Sbjct: 10  LRHGTPGESIKVQGWVRTKRELKEFAFLDVNDGSSLQGLQVVVNQNLPEYEQTLK----L 65

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +S   E + +     ++EL A+ +++   A+    P+  +R   E +R     L
Sbjct: 66  LNTGSSVSIEGELVASQGKNQRVELVAKAVQVWGTADLETYPLQKKRHSFEFLR-TIAHL 124

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS- 190
             R +TL      R     ++       +F+   TPI+TAS  EGA + L  + +N    
Sbjct: 125 RSRTNTLGSVFRIRNACSQAIHQFFQDRDFMWIHTPIITASDCEGAGEQLAVTSLNLQDV 184

Query: 191 -------------FYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+  P       Q +  +MAS F   +   P FR E+  + R   EF
Sbjct: 185 PLSEDQTVDYSQDFFGKPTYLTVSGQLEGEIMASAFCNVYTFGPTFRAENSNTSRHLAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NN 273
           + ++ E++F +    ++  E  L+ VF+                              + 
Sbjct: 245 WMVEPEVAFCDLQGDMDLAEAFLKHVFKSVLEQCPEDFEFFNLRIDKSVLETADTIINSE 304

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           F RI Y +A+ +          P+   +   +EH  +    +F K + V    +      
Sbjct: 305 FERITYTEAVNQLEKASRKFEFPVEWGLDLQSEHERYLSEELFKKPVIVTDYPKQIKAFY 364

Query: 332 KGGGGNRAFCDRMNEWARSQG 352
                +      M+      G
Sbjct: 365 MRMNDDDKTVAAMDVLVPKIG 385



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 46/134 (34%), Gaps = 24/134 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +   + D+P        K+I      F M          ND     A    LV    EI 
Sbjct: 349 KPVIVTDYP--------KQIKA----FYMRM--------NDDDKTVAAMDVLVPKIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +++ Q     G+        +       + G  PH G   G +R+V  + G
Sbjct: 389 GGSQREERLDLLEQRIVAQGLPL----EDYWWYLDLRRYGTVPHAGFGLGFERLVQFMTG 444

Query: 553 AKNVREVSLFPMSQ 566
             N+R+V  FP + 
Sbjct: 445 MANIRDVIPFPRTP 458


>gi|293568613|ref|ZP_06679928.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|293571665|ref|ZP_06682686.1| asparaginyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291588573|gb|EFF20406.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291608335|gb|EFF37636.1| asparaginyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 432

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 72/299 (24%), Positives = 118/299 (39%), Gaps = 32/299 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEW 69
             + VG  V +  WV   R  G I FL +RD         V +      F+ AK++  E 
Sbjct: 9   SKNHVGETVTIGAWVANKRSSGKIAFLQLRDGTAFFQGVVVKSEVPEEVFQTAKNLHQET 68

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G +   S             E+    +E++S + + P+     +E+       +R
Sbjct: 69  SVLVTGEIREDSRSKF-------GYEIGITNVEVVSESHDYPITP---KEHGTDFLMDHR 118

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR    H  +  R  II +        +F++   PILT S+PEG  D    +  +Q 
Sbjct: 119 HLWLRSSRQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEGTTDLFETNYFDQK 178

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F  Q++ 
Sbjct: 179 AY--LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTHQEES 235

Query: 250 LNTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPD 292
           L   E  +  + +   +                       F RI YDDAI     +  D
Sbjct: 236 LEVQEQYVAFLVQNVLDHCEYALDVLGRDKEVLKTYTKLPFPRITYDDAIELLKKNGFD 294



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 38/113 (33%), Gaps = 10/113 (8%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
              A  PF M               I    Y       EI  G  R    + +L+   N 
Sbjct: 323 YPKAIKPFYMKPHPTREDVVICADMIAPEGY------GEIIGGSERATDYDFLLEQIRNH 376

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G+ ++     +       + G  PH G   G++R V  + G  +VRE   FP 
Sbjct: 377 GLDEKE----YSWYLDLRKYGSVPHSGFGLGLERTVTWIAGIDHVREAIPFPR 425


>gi|86605053|ref|YP_473816.1| lysyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|86553595|gb|ABC98553.1| lysyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 508

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 56/291 (19%), Positives = 108/291 (37%), Gaps = 17/291 (5%)

Query: 6   THSCGDL---------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           TH   +L         G       V ++G +   R  G + F  ++D  G  Q+      
Sbjct: 38  THLAAELQAQFADLEPGAEREDVQVAVAGRIRARRVMGKLAFFTLQDRSGTIQLYLEKQR 97

Query: 57  ACFEIAK-SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               + + + ++   L   G  +             G++ +   + ++L+ A  LPLP  
Sbjct: 98  LTQHMGELAFKNLDKLLDVGDWLGAKGCLKRTE--KGELSVRVDEYQVLTKAL-LPLPDK 154

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSP 174
                    R++ R++DL  +   K  +  R +I+ S+R  +    F+E  TP+L     
Sbjct: 155 WHGLRDVEKRYRQRYVDLIVNPEVKQTLLDRAKIVRSLRQTLEERGFVEIETPVLQVIPG 214

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 215 GAEARPFITHHNALDLDLY-LRIATELHLKRLVVGGIERVYEIGRVFRNEGISTRHNP-E 272

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           F  L+   +F +   ++   E ++            ++     I      R
Sbjct: 273 FTSLEAYQAFADYHTMMELTEALVCNAALAVRGSLQITYQGETIDLTPPWR 323



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 4/93 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQ 530
               A +++L   G E A+            Q        K   +     L      A +
Sbjct: 406 KPGLAERFELFIVGRETANAYSELTDPVDQRQRLEAQAALKAAGDEEAHFLDEDFLTALE 465

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+PP GG+  GIDR+ MLL  A ++R+V  FP
Sbjct: 466 YGLPPTGGLGIGIDRLAMLLCDAASIRDVIAFP 498


>gi|281358632|ref|ZP_06245110.1| lysyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281314862|gb|EFA98897.1| lysyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 505

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 55/271 (20%), Positives = 111/271 (40%), Gaps = 10/271 (3%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           + G  V ++G +   R  G  IF D++D  G  Q+         EI +   + +     G
Sbjct: 64  EFGPEVVVAGRLMAKRGMGKSIFADLKDSTGKIQLFVGKS----EIGEEAFAIFKKLDIG 119

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++     T    +  G++ +   +  +LS +   PLP           R++ R+LDL  
Sbjct: 120 DIVGIKGPTFVTRM--GELTIRVHECTLLSKSLR-PLPEKYHGLVDIEQRYRQRYLDLIT 176

Query: 136 DTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           +    + +  R+RI+  +R  M    F+E  TP+L A +   + +          S   +
Sbjct: 177 NEESFRVLKLRSRILAEIRNFMNGRGFMEVETPMLQALAGGASANPFTTYYEALSSTMYM 236

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF++ +++   FR+E     R   EF  +++  ++ +   ++  +E
Sbjct: 237 RIAPELYLKRLLVGGFEKVYELGRNFRNEGMD-RRHNPEFTMMEIYQAYGDCRTMMELIE 295

Query: 255 NVLRGV-FEEFSNGNTVSNNFLRICYDDAIR 284
           +++  V  +          N   I      R
Sbjct: 296 SLITTVAMKTVGTLKIDHGNGKVIDLTPPWR 326



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 57/156 (36%), Gaps = 9/156 (5%)

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL- 475
           R    QEL +          + +   YE   E   I       T     +  L       
Sbjct: 350 RIKRGQELKLDVHTGMSDLDVTN-ELYEKLVEPTLIQPTF--VTRIPVELLPLAKGCPDD 406

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-----GISKEVVENRFGGLYRAFQ 530
                 ++L  NG E+A      +   +  Q               + E        A +
Sbjct: 407 PTHVDVFELGINGVEVAPAYSELNNPIIQRQRLMEQFEKNKQEGDVLAEKVDEDFLVALE 466

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GMPP GG+  GIDR+VM+L GA+++R+V LFP  +
Sbjct: 467 HGMPPAGGMGVGIDRLVMILTGAESIRDVILFPQMK 502


>gi|294498164|ref|YP_003561864.1| asparaginyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294348101|gb|ADE68430.1| asparaginyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 430

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 73/292 (25%), Positives = 115/292 (39%), Gaps = 31/292 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWV 70
              VG  V +  W+   R  G I FL +RD  G  Q   V A  +   F++AKS+  E  
Sbjct: 9   SKHVGKEVTIGAWLANKRSSGKIAFLQLRDGSGFMQGVVVKAEVEEETFKLAKSMTQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G+V                 EL+   +E++  A + P+     +E+        R 
Sbjct: 69  LYVTGVVREDERSPF-------GYELTVTSLEVIHEAVDYPITP---KEHGTEFLMDNRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II +         F +   PILT S+PEG  +        + +
Sbjct: 119 LWLRSKRQHAVMKVRNEIIRATYEFFNENGFTKVDPPILTGSAPEGTTELFHTKYFEEDA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F + +D L
Sbjct: 179 Y--LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYQFEDNL 235

Query: 251 NTMENVLRGVFEEF---------------SNGNTVSNNFLRICYDDAIRRYG 287
              E  +  V +                 S    +   F RI YD+A++   
Sbjct: 236 KVQEEYVSHVVQSVLTNCKLELNVLGRDTSKLEQIKAPFPRISYDEALKFLH 287



 Score = 70.5 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 47/140 (33%), Gaps = 26/140 (18%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           I  +  +  +I  +P             +  PF M           D++       DL+ 
Sbjct: 308 IAESYDKPVFITHYP------------TSLKPFYMQPDPT----NEDVVLCA----DLIA 347

Query: 487 N--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
                EI  G  R H  E++ Q      +        +       + G  PH G   G++
Sbjct: 348 PEGYGEIIGGSERIHDQELLAQRVEEHKLDT----ETYKWYLELRKYGSVPHSGFGLGLE 403

Query: 545 RIVMLLLGAKNVREVSLFPM 564
           R V  + G ++VRE   FP 
Sbjct: 404 RTVAWISGVEHVRETIPFPR 423


>gi|6094394|sp|O24822|SYD_HALVO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3298338|dbj|BAA31457.1| aspartyl tRNA synthetase [Haloferax volcanii]
          Length = 433

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 148/350 (42%), Gaps = 42/350 (12%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           R RT++      ++ G  V ++GWVH VR  GGI FL +RD  G  QV    D    ++ 
Sbjct: 2   RNRTYTAD----AEPGDTVTVAGWVHEVRDLGGIAFLILRDTSGKIQVKFEKDEMDDDLV 57

Query: 63  KS---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGER 118
           ++   V  E V+ + G V             TG +E++ + +++++ AE +LPL   G+ 
Sbjct: 58  ETGLGVHRESVISVTGEVDEEP------RAPTG-VEVTPESLDVIAEAEAQLPLDPSGKV 110

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +   S R   R LDLR+D +      R  +  ++R +       E +TP + A+  EG  
Sbjct: 111 DAELSTRLDNRTLDLRKDEVKAIFEIRAEVQRAVRDKFRDLRATEINTPKIVATGTEGGT 170

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +    +   Q +F    Q+PQ +KQL++ SG +R F++ P FR E+  + R   E   +D
Sbjct: 171 ELFPITYFGQEAFMN--QSPQLFKQLMVGSGLERVFEVGPIFRAEEHNTPRHLNEATSID 228

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF----------LRICYDD------- 281
            E +F++  + ++  E V+   +E                       R+           
Sbjct: 229 FESAFIDHTEAMDVCEAVVTAAYEAVEENCQDELEALGLEEEFERRPRVPAAHLRGGHRA 288

Query: 282 --------AIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
                       +G D P      +  +V EH+  +++    K   +   
Sbjct: 289 HQRTGELDEQLVWGDDLPTEGEKALGEDVGEHYFITDWPSEIKPFYIKDH 338



 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 69/173 (39%), Gaps = 18/173 (10%)

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI--DFAHNPFTM 461
              +         R H  Q  G ++    +  W  D P     E EK +  D   + F  
Sbjct: 274 RPRVPAAHLRGGHRAH--QRTGELDE---QLVWGDDLP----TEGEKALGEDVGEHYFIT 324

Query: 462 PQGGMES---LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
                     +K +D     +  +D++    E+ SGG R H  + ++  F   G+     
Sbjct: 325 DWPSEIKPFYIKDHDDDETLSTGFDMMHPNMELVSGGQREHRFDHLVAGFEQQGLDP--- 381

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            + F    + F+ GMPPH G   G +R++M +LG +N+RE  LFP  +     
Sbjct: 382 -DAFEYYTKMFKYGMPPHAGFGLGGERLIMTMLGLENIREAVLFPRDRQRLSP 433


>gi|289807187|ref|ZP_06537816.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 185

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 52/182 (28%), Positives = 76/182 (41%), Gaps = 1/182 (0%)

Query: 327 WAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386
                 G   +R   D    + +  G  GLAYI       G      PVAK L     EA
Sbjct: 1   ALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVAKFLTADIVEA 60

Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWN 446
           I  R   QDGD  FF A +           R  + ++L + + + +   W++DFP +E +
Sbjct: 61  ILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKDLSLTDEDKWAPLWVIDFPMFE-D 119

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           + E  +   H+PFT P+    S          A  YD+V NG+E+  G +R H  E+   
Sbjct: 120 DGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQT 179

Query: 507 AF 508
            F
Sbjct: 180 VF 181


>gi|209559054|ref|YP_002285526.1| lysyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|238064862|sp|B5XKG9|SYK_STRPZ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|209540255|gb|ACI60831.1| Lysyl-tRNA synthetase (class II) [Streptococcus pyogenes NZ131]
          Length = 497

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 61/332 (18%), Positives = 123/332 (37%), Gaps = 26/332 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L             ++     ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSAELKEKYADKTKEELHELNETAIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   +  +  +   +    G  +    E +  ++  G++ + A K+  LS +   PLP 
Sbjct: 97  DSVGEDNYEIFKKADL----GDFIGVEGEVMRTDM--GELSIKATKLTHLSKSLR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R LDL  +       V R+++I+ +R  +   +F+E  TP+L   +
Sbjct: 150 KFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    V     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI+N  E +++   +       +      I  ++  +R        
Sbjct: 269 FTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFKRVHMVDA-- 326

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                +  VT      E  V   I        
Sbjct: 327 -----IKEVTGVDFWPEMTVEEAIALAKEKQV 353



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      F  P       K N   +    +++L     E A+   
Sbjct: 365 IINAFFEEFVEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 423 ELNDPIDQLSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTN 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 TTTIRDVLLFPTMK 496


>gi|257883094|ref|ZP_05662747.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257818752|gb|EEV46080.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,502]
          Length = 432

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 72/299 (24%), Positives = 118/299 (39%), Gaps = 32/299 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEW 69
             + VG  V +  WV   R  G I FL +RD         V +      F+ AK++  E 
Sbjct: 9   SKNHVGETVTIGAWVANKRSSGKITFLQLRDGTAFFQGVVVKSEVSEEVFQTAKNLHQET 68

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G +   S             E+    +E++S + + P+     +E+       +R
Sbjct: 69  SVLVTGEIREDSRSKF-------GYEIGITNVEVVSESHDYPITP---KEHGTDFLMDHR 118

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR    H  +  R  II +        +F++   PILT S+PEG  D    +  +Q 
Sbjct: 119 HLWLRSSRQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEGTTDLFETNYFDQK 178

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F  Q++ 
Sbjct: 179 AY--LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTHQEES 235

Query: 250 LNTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPD 292
           L   E  +  + +   +                       F RI YDDAI     +  D
Sbjct: 236 LEVQEQYVAFLVQNVLDHCEYALDVLGRDKEVLKTYTKLPFPRITYDDAIELLKKNGFD 294



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 38/113 (33%), Gaps = 10/113 (8%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
              A  PF M               I    Y       EI  G  R    + +L+   N 
Sbjct: 323 YPKAIKPFYMKPHPTREDVVICADMIAPEGY------GEIIGGSERATDYDFLLEQIRNH 376

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G+ ++     +       + G  PH G   G++R V  + G  +VRE   FP 
Sbjct: 377 GLDEKE----YSWYLDLRKYGSVPHSGFGLGLERTVTWIAGIDHVREAIPFPR 425


>gi|71903140|ref|YP_279943.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|71802235|gb|AAX71588.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 501

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 61/332 (18%), Positives = 123/332 (37%), Gaps = 26/332 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L             ++     ++G +   R  G + F  ++D  G  Q+    
Sbjct: 41  RTANSAELKEKYADKTKEELHELNETAIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRK 100

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   +  +  +   +    G  +    E +  ++  G++ + A K+  LS +   PLP 
Sbjct: 101 DSVGEDNYEIFKKADL----GDFIGVEGEVMRTDM--GELSIKATKLTHLSKSLR-PLPE 153

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R LDL  +       V R+++I+ +R  +   +F+E  TP+L   +
Sbjct: 154 KFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETPVLHNEA 213

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    V     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 214 GGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 272

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI+N  E +++   +       +      I  ++  +R        
Sbjct: 273 FTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFKRVHMVDA-- 330

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                +  VT      E  V   I        
Sbjct: 331 -----IKEVTGVDFWPEMTVEEAIALAKEKQV 357



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      F  P       K N   +    +++L     E A+   
Sbjct: 369 IINAFFEEFVEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFT 426

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 427 ELNDPIDQLSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTN 486

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 487 TTTIRDVLLFPTMK 500


>gi|331000231|ref|ZP_08323915.1| lysine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329572397|gb|EGG54050.1| lysine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 511

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 59/292 (20%), Positives = 112/292 (38%), Gaps = 12/292 (4%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           + +  +L  + V   V ++G V   R  G   FL ++D     Q          E     
Sbjct: 61  SKTPEELEAAPV--EVTVAGRVMLKRVMGKASFLTVKDGTDHIQFFITKAEVGDETYDFF 118

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           +    +   G ++  +         TG++ +  +   +L+     PLP           R
Sbjct: 119 KKMVDI---GDIVGATGTLFFTK--TGELSVRVKNFRLLTK-NIRPLPDKFHGLSDPETR 172

Query: 126 FKYRFLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
           ++ R++DL  +    +  + R++ I   R  M+  +F+E  TP+L        A+ F+  
Sbjct: 173 YRQRYVDLIMNESTRRTFMIRSKAIAETRKFMMEHHFMEVETPMLHPIPGGANAKPFITH 232

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  GF+R F++   FR+E       P EF  ++   ++
Sbjct: 233 HNALDMDMY-LRIAPELYLKRLVVGGFERVFELNRSFRNEGVDVRHNP-EFTMMEFYAAY 290

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            E   +++  E +LR V E+      +      I       R    +  L+ 
Sbjct: 291 KEYHWLMDYTEKLLRTVAEKTIGTAVIQYQGHTIDLTKPFDRLTAKEAVLKY 342



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
           + +D +     +++L   G E A+G    +  +     F      K   ++         
Sbjct: 408 RASDKVPGITERFELFMAGRETANGFSELNDPQDQAARFMAQAKLKASGDDEAMYYDADY 467

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            RA + G+PP GG   G+DR VMLL  + ++R+V LFP  +
Sbjct: 468 VRALEYGLPPTGGCGVGLDRFVMLLTDSPSIRDVLLFPHMR 508


>gi|239618393|ref|YP_002941715.1| lysyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239507224|gb|ACR80711.1| lysyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 504

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 71/342 (20%), Positives = 130/342 (38%), Gaps = 21/342 (6%)

Query: 2   HRYRTHSCGDLGVS---------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           H  +THS  D+               + + ++G V  +R HG   F  ++D  G  Q   
Sbjct: 27  HFEKTHSTSDIRKEYDMLQPSETKEDTTISVAGRVMALRHHGKSSFFVLKDSDGRIQAYI 86

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
             DS   E  K  +    +           +       TG++ +  +  ++LS A     
Sbjct: 87  RKDSVGDEAFKLFKKYVSIGD-----FVGVKGFPFKTHTGELSIFVKDFKLLSKAIRTM- 140

Query: 113 PVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
           P        + I ++ R++++   D   K    R  ++  +R  + A  FIE  TPIL +
Sbjct: 141 PEKWHGIKDKEIIYRQRYVEMIASDDAIKRFKIRFELLRRVREFLNARGFIEVETPILHS 200

Query: 172 SSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +    AR F+    V     Y L  A + Y +  +  GF++ ++I   FR+E       
Sbjct: 201 VTGGASARPFVTHINVFDSDMY-LRIAEELYLKRYLVGGFEKIYEIGKNFRNEGMSYKHH 259

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  +++  ++ + +DI++  E+++  V E+ +    +      I  D A        
Sbjct: 260 P-EFVMMELYQAYADYNDIMDLTEDLISTVVEQLTGSTKIVYQGKEI--DFAKPWLRIKM 316

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            D     +  ++ E        V  K  SV    E   +  K
Sbjct: 317 ADFIKEKLGVDILEDSDERLIEVLEKHNSVPEIKERGHLIEK 358



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 59/152 (38%), Gaps = 26/152 (17%)

Query: 417 RNHIAQEL-GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           R H+ ++L  ++  +  +  ++++                 +P  +    +  +   D  
Sbjct: 352 RGHLIEKLWDLVEDDIVQPTFVVE-----------------HPVIISP--LAKVHREDPR 392

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV----GISKEVVENRFGGLYRAFQC 531
                +++L+ NG E A+     +      + F +            +       RA + 
Sbjct: 393 --VTERFELIINGMECANAFSELNDPIEQYRRFLHQAGLREAGDAEAQMMDRDFIRALEY 450

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP GG+  G DRI+M +  +  +R+V  FP
Sbjct: 451 GMPPTGGLGIGWDRILMFVTDSPTIRDVIPFP 482


>gi|91789471|ref|YP_550423.1| lysyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|91698696|gb|ABE45525.1| lysyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 516

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 66/326 (20%), Positives = 139/326 (42%), Gaps = 27/326 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY-----GITQVVANPDSA 57
           +Y + +  +LG   V   V ++G +   R  G   F  ++D       G  QV  N +  
Sbjct: 57  QYDSKTKEELGPLAV--KVSVAGRMMLKRVMGKASFATLQDASFGPSGGRIQVYINNEGV 114

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+  + +   +    G +++ +         TG++ + A  I +++ +   PLP    
Sbjct: 115 GEEVHNAFKHWDL----GDIVAATGTLF--KTKTGELSIHATSIRLVTKSLR-PLPDKFH 167

Query: 118 REYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
               + ++++ R++DL  D    K  + R++ ++ +R  M+A +F+E  TP+L       
Sbjct: 168 GMADQEVKYRQRYVDLIMDESARKRFMARSKAVSGLREFMVAHDFLEVETPMLHPIPGGA 227

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F           + L  AP+ Y + L+  GF+R F+I   +R+E   S R   EF 
Sbjct: 228 NARPFKTHHNALDQEMF-LRIAPELYLKRLIVGGFERVFEINRSYRNEGI-SVRHNPEFT 285

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY 286
            ++   ++    D++   E ++R   ++ +    +S           F R+   +AI ++
Sbjct: 286 MMEFYAAWWNYSDLMTFTEALIRDAAQKVTGSLQLSYGGKAVDLSQPFERLTIREAILKH 345

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSEFR 312
                 + + + + N  +    +E +
Sbjct: 346 TEAGEHVDDMVWLTNALKKLGATEAK 371



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           ++E   EEK        F M      S   + ND       +++L   G E  +G    +
Sbjct: 386 YFEETVEEKLWQPT---FIMEHPTEISPLARANDARPEVTERFELYITGREFGNGFSELN 442

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            +E     F+    +K+  ++          RA + GMPP GG   GIDR++MLL  + +
Sbjct: 443 DAEEQAARFNAQVAAKDDGDDEAMFYDHDFIRALEYGMPPTGGCGVGIDRLMMLLTDSPS 502

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 503 IRDVILFP 510


>gi|227551929|ref|ZP_03981978.1| asparagine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257886906|ref|ZP_05666559.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257895477|ref|ZP_05675130.1| asparaginyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257898093|ref|ZP_05677746.1| asparaginyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|293378343|ref|ZP_06624512.1| asparagine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|227178930|gb|EEI59902.1| asparagine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257822960|gb|EEV49892.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257832042|gb|EEV58463.1| asparaginyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257836005|gb|EEV61079.1| asparaginyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|292643207|gb|EFF61348.1| asparagine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 432

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 72/299 (24%), Positives = 118/299 (39%), Gaps = 32/299 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEW 69
             + VG  V +  WV   R  G I FL +RD         V +      F+ AK++  E 
Sbjct: 9   SKNHVGETVTIGAWVANKRSSGKIAFLQLRDGTAFFQGVVVKSEVPEEVFQTAKNLHQET 68

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G +   S             E+    +E++S + + P+     +E+       +R
Sbjct: 69  SVLVTGEIREDSRSKF-------GYEIGITNVEVVSESHDYPITP---KEHGTDFLMDHR 118

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR    H  +  R  II +        +F++   PILT S+PEG  D    +  +Q 
Sbjct: 119 HLWLRSSRQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEGTTDLFETNYFDQK 178

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F  Q++ 
Sbjct: 179 AY--LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTHQEES 235

Query: 250 LNTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPD 292
           L   E  +  + +   +                       F RI YDDAI     +  D
Sbjct: 236 LEVQEQYVAFLVQNVLDHCEYALDVLGRDKEVLKTYTKLPFPRITYDDAIELLKKNGFD 294



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 38/113 (33%), Gaps = 10/113 (8%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
              A  PF M               I    Y       EI  G  R    + +L+   + 
Sbjct: 323 YPKAIKPFYMKPHPTREDVVICADMIAPEGY------GEIIGGSERATDYDFLLEQIRDH 376

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G+ ++     +       + G  PH G   G++R V  + G  +VRE   FP 
Sbjct: 377 GLDEKE----YSWYLDLRKYGSVPHSGFGLGLERTVTWIAGIDHVREAIPFPR 425


>gi|21909956|ref|NP_664224.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|39932216|sp|Q8K880|SYK_STRP3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|21904145|gb|AAM79027.1| putative lysyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
          Length = 497

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 61/332 (18%), Positives = 124/332 (37%), Gaps = 26/332 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L  +          ++     ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSAELKENYADKTKEELHELNETAIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   +  +  +   +    G  +    E +  ++  G++ + A K+  LS +   PLP 
Sbjct: 97  DSVGEDNYEIFKKADL----GDFIGVEGEVMRTDM--GELSIKATKLTHLSKSLR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R LDL  +       V R+++I+ +R  +   +F+E  TP+L   +
Sbjct: 150 KFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    V     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI+N  E +++   +       +      I  ++  +R        
Sbjct: 269 FTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFKRVHMVDA-- 326

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                +  VT      E  V   I        
Sbjct: 327 -----IKEVTGVDFWPEMTVEEAIALAKEKQV 353



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      F  P       K N   +    +++L     E A+   
Sbjct: 365 IINAFFEEFVEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 423 ELNDPIDQLSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTN 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 TTTIRDVLLFPTMK 496


>gi|312867292|ref|ZP_07727501.1| lysine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311096993|gb|EFQ55228.1| lysine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 438

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/331 (18%), Positives = 123/331 (37%), Gaps = 17/331 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
                ++G +   R  G + F  ++D  G  Q+    D+   E  +  +   +    G  
Sbjct: 2   NEKAIIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEENYEIFKKADL----GDF 57

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    E +  ++  G++ + A  I  LS A   PLP            ++ R+LDL  + 
Sbjct: 58  LGVEGEIMRTDM--GELSIKATHITHLSKALR-PLPEKFHGLSDVETIYRKRYLDLISNR 114

Query: 138 LHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                 V R++II+ +R  +  + F+E  TP+L   +   A    +     Q     L  
Sbjct: 115 ESFERFVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRI 174

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI++  E +
Sbjct: 175 ATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFHDIMDLTEGI 233

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           ++   +       +      I  ++  +R             +  +T      +      
Sbjct: 234 IQHAAKAVHGDGPIDYQGTEIKINEPFKRVHMVDA-------IKEITGVDFWQDMTFEEA 286

Query: 317 -ILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
             L+      V     + G    AF +   E
Sbjct: 287 VALANEKHVPVEKHYTEVGQIINAFFEEFVE 317



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      +  P       K N        +++L     E A+   
Sbjct: 307 IINAFFEEFVEET--LTQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 364

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     LQ F     +KE+ ++   G       A + GMPP GG+  GIDR+VMLL  
Sbjct: 365 ELNDPIDQLQRFEAQARAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTN 424

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 425 VTTIRDVLLFPTMK 438


>gi|294506912|ref|YP_003570970.1| Lysyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294343240|emb|CBH24018.1| Lysyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 514

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 96/575 (16%), Positives = 183/575 (31%), Gaps = 136/575 (23%)

Query: 10  GDLGVSDVGS----FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
            DL   + G      V ++G +  +R  GG  F D+RD  G  QV         +    V
Sbjct: 49  DDLHQPEDGEVGGYKVSVAGRITGLRVMGGSAFFDLRDETGTIQVYVRSQDLGDDFYDEV 108

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSA-QKIEILSVAEELPLPVFGERE----- 119
            +E  L   G ++          +  G++ + A  + ++L+ A      V    E     
Sbjct: 109 FTE--LFDIGDIVGVEGFVFRTGM--GEVTVRAADEFQLLAKALRPLPVVKETEEETYYE 164

Query: 120 -YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
              +  R++ R++DL  +   + + + R+ +I++MR  +  +  +E  TP+L        
Sbjct: 165 VTDKEFRYRQRYVDLAVNEDVRGVFRQRSELISTMRRFLDEQGCLEVETPVLQPVYGGAS 224

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A  F           Y L  A + Y + L+  GF+  ++I                    
Sbjct: 225 AAPFETHHNALDMPLY-LRIADELYLKRLLVGGFEGVYEIG------------------- 264

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
                                    ++F N      +       +    Y       ++ 
Sbjct: 265 -------------------------KDFRNEGLSRFHNPEFTMMECYVAY-------KDY 292

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             M ++TE F+ +         +V   +E   I   GG     F + + E          
Sbjct: 293 RWMMDLTEDFLRTAATALHDTPTV--AFEGHEIDFGGGWTRIPFFEAIEE--------AT 342

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +  +R              +  ++   E     ++   G                    
Sbjct: 343 GFDLYRAGAD----------RVYDVAANELGLEEVEADMG----------------LGGL 376

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            + I  E   +     +  ++ D+P               +P        E L       
Sbjct: 377 LDEIFSE--TVEPTLVQPTFVTDYP------------IELSPLAKKHREKEGL------- 415

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF--------GGLYRA 528
               +++LV  G E+A+     +  +   + F      +    +              RA
Sbjct: 416 --VERFELVVAGREVANAFSELNDPQDQRERFERQARQRAAEVDDDVDPEDLIDEDYLRA 473

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            + GMPP  G+  GIDR+ M+L G +++R+V LFP
Sbjct: 474 LEYGMPPAAGLGVGIDRLTMILTGQESIRDVILFP 508


>gi|302842054|ref|XP_002952571.1| hypothetical protein VOLCADRAFT_62618 [Volvox carteri f.
           nagariensis]
 gi|300262210|gb|EFJ46418.1| hypothetical protein VOLCADRAFT_62618 [Volvox carteri f.
           nagariensis]
          Length = 493

 Score =  195 bits (496), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 77/384 (20%), Positives = 146/384 (38%), Gaps = 33/384 (8%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   DL             + G+ V ++G V   R  G + FL +RD  G  Q+  + 
Sbjct: 30  RTHFTKDLQDLYASLPNGAEDEAGTLVAVAGRVLAKRVMGKLAFLSLRDDKGQIQLYVDR 89

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                   +   +   L   G ++  S          G++ + A  +++L+ +  LPLP 
Sbjct: 90  TRLDASQNEGFNTVKGLVDVGDIVGCSGTVKRTE--KGELSVVATGMQVLTKSL-LPLPD 146

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASS 173
                     R++ R+LDL      ++  + R+RII+++R ++    FIE  TP+L + +
Sbjct: 147 KWHGLSDVEKRYRQRYLDLIMTAEVRDTFRARSRIISTLRRQLEDRGFIEVETPVLESVA 206

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                        + G    L  A + + + ++  GF+R F++   FR+E   S   P E
Sbjct: 207 GGADARPFRTFHNSLGRDLTLRIATELHLKRMVVGGFERVFELGRVFRNEGLSSRHNP-E 265

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ + +D++N  E ++R    E                  A   Y     D 
Sbjct: 266 FTSVEIYQAYADYNDMMNLTEELIRVCAMEVRG--------------SAQVSYQGVAIDF 311

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
             P     + +    +    F   ++           A       +    +NE   + G+
Sbjct: 312 SQPFRRVTMADLVREACGLDFEAAMAAARQVGSAEAAAAVRSAP-SLGHLLNEMFEAVGE 370

Query: 354 PGLAYIFWRLDESGNVAGMGPVAK 377
            GL    + L+    +    P+AK
Sbjct: 371 AGLVQPTFVLEHPVEI---SPLAK 391



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 42/131 (32%), Gaps = 13/131 (9%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            +E   E   +       +P  +                   +++L   G E A+     
Sbjct: 364 MFEAVGEAGLVQPTFVLEHPVEISPLAKPHRSKP----GVTERFELFIYGREHANAFSEL 419

Query: 499 HMSEVMLQAFSNVGISKEVVENRFG------GLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
                    F                         A + GMPP GG+  G+DR+VMLL  
Sbjct: 420 TDPVDQRARFEAQVARHNAAFQERQKVALDTDFIAALEYGMPPTGGLGIGVDRLVMLLTD 479

Query: 553 AKNVREVSLFP 563
           + ++R+V  FP
Sbjct: 480 SPSIRDVIAFP 490


>gi|319936968|ref|ZP_08011378.1| lysyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807904|gb|EFW04483.1| lysyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 642

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 61/299 (20%), Positives = 113/299 (37%), Gaps = 30/299 (10%)

Query: 6   THSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH    +     G            V+++G +   R  G + F+ I+D  G  Q+    D
Sbjct: 35  THFSKQIKEEFAGKTHEELEEMAVPVKIAGRIMTKRRKGKVCFMHIQDRDGQIQIYVRKD 94

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               +  + +    +  I G+      E       TG++ +   K   L+ A   PLP  
Sbjct: 95  VIGEDEYEVLIKSDIGDIVGI------EGTVFVTNTGELSVKVAKFIHLTKALR-PLPEK 147

Query: 116 GEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTAS-S 173
                    R++ R++DL  +   +     R +II S++  + ++ ++E  TP+L     
Sbjct: 148 YHGLSDVEERYRRRYVDLIMNEESRKIAFARPKIIRSIQNFLDSQGYVEVETPVLNPILG 207

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F         +FY L  A +   + L+  G D  ++I   FR+E       P E
Sbjct: 208 GAAARPFTTHHNALDMNFY-LRIATELSLKRLIVGGMDAVYEIGRLFRNEGMDRTHNP-E 265

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283
           F  +++  +F + + +++  E ++            +            F RI   DAI
Sbjct: 266 FTTIEVYKAFSDLEGMMDLTEGIISNAAMSVCGTYDLEYKGNKISLAPGFKRISMTDAI 324



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 10/154 (6%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEE--KKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +A+E  I   N F +  I++  F E+ EE   +      +P  +     ++L+       
Sbjct: 344 LAEERHIEVENHFGYGHIINAFFEEYVEETIVEPTFVYGHPIEISPLAKKNLEDP----R 399

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
              +++L   G E A+     +      + FSN    KE               A + G+
Sbjct: 400 FTQRFELFICGNEYANAFTELNDPIDQYERFSNQLKEKELGNDEANEMDLDYVEALEYGL 459

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG+  GIDR+VMLL G +++REV LFP  + 
Sbjct: 460 PPTGGMGMGIDRLVMLLTGQESIREVILFPTMKT 493


>gi|15674679|ref|NP_268853.1| lysyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71910308|ref|YP_281858.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|39932234|sp|Q9A0V7|SYK_STRP1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|13621797|gb|AAK33574.1| putative lysyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71853090|gb|AAZ51113.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 497

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 66/354 (18%), Positives = 131/354 (37%), Gaps = 27/354 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L             ++     ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSAELKEKYADKTKEELHELNETAIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   +  +  +   +    G  +    E +  ++  G++ + A K+  LS +   PLP 
Sbjct: 97  DSVGEDNYEIFKKADL----GDFIGVEGEVMRTDM--GELSIKATKLTHLSKSLR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R LDL  +       V R+++I+ +R  +   +F+E  TP+L   +
Sbjct: 150 KFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    V     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI+N  E +++   +       +      I  ++  +R        
Sbjct: 269 FTSIEVYQAYADYLDIMNLTEGIIQHAAKAVRGDGPIDYQGTEIRINEPFKRVHMVDA-- 326

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKI-LSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                +  VT      E  V   I L+      +       G    AF +   E
Sbjct: 327 -----IKEVTGADFWPEMTVEEAIALAKEKQVPLEKHFISVGHIINAFFEEFVE 375



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      F  P       K N   +    +++L     E A+   
Sbjct: 365 IINAFFEEFVEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 423 ELNDPIDQLSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTN 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 TTTIRDVLLFPTMK 496


>gi|222823513|ref|YP_002575087.1| lysyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|222538735|gb|ACM63836.1| lysyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 500

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 96/551 (17%), Positives = 183/551 (33%), Gaps = 124/551 (22%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            L+G +  +R  G  +F +I D     Q+  N +    E    ++    L +  +V+   
Sbjct: 59  VLAGRLKLLRIAGKSVFANIEDEQDNLQIYFNQNILGEEYFAILKKY--LEVGDIVL--- 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
            +       TG+  L  ++I+I + A  +PLP           R++ R+LD+  +  + K
Sbjct: 114 VKGFPFMTKTGEFSLHVEQIQIATKA-IVPLPEKYHGLTDIEQRYRKRYLDMIMNSEVRK 172

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           + + R++I++ +R     + F+E  TP++   +        V      G    L  AP+ 
Sbjct: 173 DFILRSKIVSYIRSFFDNKGFLEVETPMMHPIAGGANAKPFVTYHNALGVERFLRIAPEL 232

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF+  ++I  CFR+E                          ++   N     
Sbjct: 233 YLKRLIVGGFEAVYEINRCFRNEG-------------------------MDLTHN----- 262

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
                        F  I +  A   Y            + ++TE        +F+ +L  
Sbjct: 263 -----------PEFTTIEFYWAYHNYHD----------LMDLTEE-------LFAMLLDK 294

Query: 321 NPGYEVWAIPAKGGGGNRAFCDR-MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
               +      K    +++F      +  +  G                          L
Sbjct: 295 LNLDKKLEFDEKIIDFSKSFERITYKDALKKYGG-------------------------L 329

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
           +        + L     D   F A + L+        +  +      +        +++D
Sbjct: 330 DDELINNKELILKKLKKDG--FEANEKLE----LGHLQAELFD--NYVEDKLINPTFVID 381

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           FP             + +P +        +         A +++L   G EIA+G    +
Sbjct: 382 FP------------ISISPLSRRSDKDADI---------AERFELFIAGREIANGFNELN 420

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F     +K   +            A    M P  G   GIDR+VMLL+  K+
Sbjct: 421 DPLDQYERFLKQIEAKNAGDEEACEMDEDFVNALGYAMAPTAGQGIGIDRLVMLLINKKS 480

Query: 556 VREVSLFPMSQ 566
           +R+V LFP  +
Sbjct: 481 IRDVVLFPAMR 491


>gi|119357536|ref|YP_912180.1| lysyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|119354885|gb|ABL65756.1| lysyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 509

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 64/320 (20%), Positives = 129/320 (40%), Gaps = 30/320 (9%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D    V ++G +  +R  G   F  ++D  G  Q+    D       ++ +   +  I G
Sbjct: 60  DANETVSVAGRIMTIRKMGKASFFHLQDANGRIQIYLKKDDVGESSYQTFKLLDIGDIVG 119

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----------YPESIR 125
           +      +       TG+I + AQ+  +LS +         +              + +R
Sbjct: 120 V------KGYTFKTKTGEISVHAQEFSLLSKSLRPIPIAKEKEIDGQKVVYDAFSDKELR 173

Query: 126 FKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVP 183
           ++ R++DL  +  + +  +KR+ I++ MR     + ++E  TPIL        AR F   
Sbjct: 174 YRQRYVDLIVNPDVRQTFIKRSAIVSFMRGFFTGQGWLEVETPILQPIYGGAAARPFTTH 233

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  A + Y + L+  GFD  F+ A  FR+E       P EF Q+++ +++
Sbjct: 234 HNALDMQLY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEGIDRFHNP-EFTQVELYVAY 291

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY-GTDKPDL 293
            + + ++  +E +        +N ++V            F R+   D+I+ Y G D  D 
Sbjct: 292 KDYEWMMKLVEELFYQTACAVNNSDSVVFLGNDISLKPPFRRLTITDSIKEYCGIDITDK 351

Query: 294 RNPIIMHNVTEHFVHSEFRV 313
               + +   +  +  + ++
Sbjct: 352 DEHELRYMARDLGLELDPKI 371



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 7/153 (4%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           + R ++A++LG+          I+D  F E+ E   K+         P       K +  
Sbjct: 355 ELR-YMARDLGLELDPKISSGKIIDEIFGEFVE--PKLIQPTFITDYPVEMSPLAKEHRS 411

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++L+  G E+ +     +   +  +        ++  +           RA +
Sbjct: 412 KPGFVERFELIAGGKELCNSFSELNDPVIQRERLEAQAKLRQRGDEEAMIVDEDFLRALE 471

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP  G+  G+DR+VMLL G  ++R+V  FP
Sbjct: 472 YGMPPCAGLGVGVDRMVMLLTGQDSIRDVIFFP 504


>gi|118587147|ref|ZP_01544576.1| lysyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|118432426|gb|EAV39163.1| lysyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
          Length = 496

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 76/307 (24%), Positives = 125/307 (40%), Gaps = 30/307 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCIDGL 76
             V ++G +   R  G IIF DIRD  G  Q+ A  D     + + +      +L   G 
Sbjct: 62  KHVIIAGRIMTKRGAGKIIFADIRDVSGTVQIYARRDDLADNYALIRRADLGDILGFSGT 121

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           VM   A         G+  +   K+  LS A   PLP           R++ R+LDL  +
Sbjct: 122 VMKTDA---------GETTILIDKLTWLSKALR-PLPDKYHGLTDIDTRYRKRYLDLISN 171

Query: 137 TLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-RDFLVPSRVNQGSFYAL 194
                  +KR++I+ ++R  M +  F+E  TPIL  S+   A R F+          Y L
Sbjct: 172 PKSFEVFIKRSKIVKAIRNYMDSIGFLEVETPILQNSAGGAAARPFVTHHNALDIDMY-L 230

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + Y + L+  G +R ++I   FR+E   +   P EF  L+   ++ +  D++   E
Sbjct: 231 RIATELYLKRLIVGGMERVYEIGRIFRNEGMDTRHNP-EFTTLESYGAYWDLSDVMIETE 289

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
           N++R   +  +              +D +  Y   K DL       ++TE         F
Sbjct: 290 NIIRAAAKSIN--------------EDGVIDYQGHKIDLSKDFAKRSMTELIKEKTGIDF 335

Query: 315 SKILSVN 321
            K + + 
Sbjct: 336 DKKIDLE 342



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 7/119 (5%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F +    +   + N+   +   +++L   G E  +     +      Q F    
Sbjct: 381 TFVYH-FPLEVSPLAKKEDNNPDFV--QRFELYIAGGEYGNAFTELNDPIDQRQRFEAQA 437

Query: 513 ISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +E      E+       A + GM P GG+  GIDR+ MLL    +VR+V LFP  +N
Sbjct: 438 AERENGNDEAESIDEDYIEALEHGMAPTGGLGIGIDRLTMLLTNQTSVRDVLLFPTMRN 496


>gi|94988116|ref|YP_596217.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94989997|ref|YP_598097.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94992003|ref|YP_600102.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94993910|ref|YP_602008.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|251782024|ref|YP_002996326.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|94541624|gb|ABF31673.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94543505|gb|ABF33553.1| Lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94545511|gb|ABF35558.1| Lysyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94547418|gb|ABF37464.1| Lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|242390653|dbj|BAH81112.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 501

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 61/332 (18%), Positives = 123/332 (37%), Gaps = 26/332 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L             ++     ++G +   R  G + F  ++D  G  Q+    
Sbjct: 41  RTANSAELKEKYADKTKEELHELNETAIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRK 100

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   +  +  +   +    G  +    E +  ++  G++ + A K+  LS +   PLP 
Sbjct: 101 DSVGEDNYEIFKKADL----GDFIGVEGEVMRTDM--GELSIKATKLTHLSKSLR-PLPE 153

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R LDL  +       V R+++I+ +R  +   +F+E  TP+L   +
Sbjct: 154 KFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETPVLHNEA 213

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    V     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 214 GGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 272

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI+N  E +++   +       +      I  ++  +R        
Sbjct: 273 FTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFKRVHMVDA-- 330

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                +  VT      E  V   I        
Sbjct: 331 -----IKEVTGVDFWPEMTVEEAIALAKEKQV 357



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      F  P       K N   +    +++L     E A+   
Sbjct: 369 IINAFFEEFVEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFT 426

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 427 ELNDPIDQLSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTN 486

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 487 TTTIRDVLLFPTMK 500


>gi|125718339|ref|YP_001035472.1| lysyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|323351244|ref|ZP_08086900.1| lysine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|166230594|sp|A3CP17|SYK_STRSV RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|125498256|gb|ABN44922.1| Lysyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
 gi|322122468|gb|EFX94179.1| lysine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|324991525|gb|EGC23458.1| lysine--tRNA ligase [Streptococcus sanguinis SK353]
 gi|324993887|gb|EGC25806.1| lysine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|325690836|gb|EGD32837.1| lysine--tRNA ligase [Streptococcus sanguinis SK115]
 gi|325696096|gb|EGD37987.1| lysine--tRNA ligase [Streptococcus sanguinis SK160]
 gi|327463149|gb|EGF09470.1| lysine--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327474760|gb|EGF20165.1| lysine--tRNA ligase [Streptococcus sanguinis SK408]
 gi|327489865|gb|EGF21654.1| lysine--tRNA ligase [Streptococcus sanguinis SK1058]
 gi|328946786|gb|EGG40924.1| lysine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 496

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 56/288 (19%), Positives = 117/288 (40%), Gaps = 11/288 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L   ++     ++G +   R  G + F  I+D  G  Q+    D+   E 
Sbjct: 46  EKYNDKDKEELN--ELNETAIIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGEEN 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +   +    G  +    E +  ++  G++ + A  +  LS A   PLP        
Sbjct: 104 YEIFKKADL----GDFLGIEGEIMRTDM--GELSIKATHLTHLSKALR-PLPEKFHGLTD 156

Query: 122 ESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A   
Sbjct: 157 VETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAARP 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++ 
Sbjct: 217 FITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVY 275

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
            ++ +  DI++  E +++      +    V+     I  ++  +R   
Sbjct: 276 QAYADFQDIMDLTEGIIQHAAVSVNGDGPVNYQGTEIKINEPFKRVHM 323



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           +++  F E+ EE   +      +  P       K N        +++L     E A+   
Sbjct: 365 VINAFFEEFVEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+VMLL  
Sbjct: 423 ELNDPIDQLSRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTD 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 VTTIRDVLLFPTMK 496


>gi|28896347|ref|NP_802697.1| lysyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|28811598|dbj|BAC64530.1| putative lysyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 501

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 61/332 (18%), Positives = 124/332 (37%), Gaps = 26/332 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L  +          ++     ++G +   R  G + F  ++D  G  Q+    
Sbjct: 41  RTANSAELKENYADKTKEELHELNETAIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRK 100

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   +  +  +   +    G  +    E +  ++  G++ + A K+  LS +   PLP 
Sbjct: 101 DSVGEDNYEIFKKADL----GDFIGVEGEVMRTDM--GELSIKATKLTHLSKSLR-PLPE 153

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R LDL  +       V R+++I+ +R  +   +F+E  TP+L   +
Sbjct: 154 KFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETPVLHNEA 213

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    V     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 214 GGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 272

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI+N  E +++   +       +      I  ++  +R        
Sbjct: 273 FTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFKRVHMVDA-- 330

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                +  VT      E  V   I        
Sbjct: 331 -----IKEVTGVDFWPEMTVEEAIALAKEKQV 357



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      F  P       K N   +    +++L     E A+   
Sbjct: 369 IINAFFEEFVEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFT 426

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 427 ELNDPIDQLSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTN 486

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 487 TTTIRDVLLFPTMK 500


>gi|325694881|gb|EGD36786.1| lysine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 496

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 56/288 (19%), Positives = 117/288 (40%), Gaps = 11/288 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L   ++     ++G +   R  G + F  I+D  G  Q+    D+   E 
Sbjct: 46  EKYNDKDKEELN--ELNETAIIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGEEN 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +   +    G  +    E +  ++  G++ + A  +  LS A   PLP        
Sbjct: 104 YEIFKKADL----GDFLGIEGEIMRTDM--GELSIKATHLTHLSKALR-PLPEKFHGLTD 156

Query: 122 ESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A   
Sbjct: 157 VETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAARP 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++ 
Sbjct: 217 FITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVY 275

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
            ++ +  DI++  E +++      +    V+     I  ++  +R   
Sbjct: 276 QAYADFQDIMDLTEGIIQHAAVSVNGDGPVNYQGTEIKINEPFKRVHM 323



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           +++  F E+ EE   +      +  P       K N        +++L     E A+   
Sbjct: 365 VINAFFEEFVEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+VMLL  
Sbjct: 423 ELNDPIDQLSRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTD 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 VTTIRDVLLFPTMK 496


>gi|311087328|gb|ADP67408.1| lysyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon
           pisum)]
          Length = 506

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 69/322 (21%), Positives = 137/322 (42%), Gaps = 13/322 (4%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y+T +  +L   ++   V ++G + + R  G   F  ++D  G  Q+  N      + 
Sbjct: 51  QKYQTKNRNELISLNI--EVSIAGRMVQRRIMGKASFFTLQDIEGKIQIYINEKKISSDF 108

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
               R  +     G ++            TG++ +  + + IL+ + + PLP        
Sbjct: 109 Y---RFHFKKWDIGDILGVIGTLF--KTKTGELSIYCKNVTILNKSLK-PLPDKFHGLSN 162

Query: 122 ESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           + IR++ R+LDL   + L+     R+ II ++R  MI  +F+E  TP+L        AR 
Sbjct: 163 QEIRYRKRYLDLISNNKLYSIFKNRSNIITAIRNFMIENDFLEVETPMLQNIPGGANARP 222

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  GF+R F++   FR+E   +   P EF  ++ 
Sbjct: 223 FITYHNEIDSQMY-LRIAPELYLKKLIIGGFERIFELNRNFRNEGVSARHNP-EFTMMEA 280

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            +++   +D++   EN+ + + +     N +  N     +    RR       L     +
Sbjct: 281 YIAYSNYEDMMELTENLFKNITKFLFQDNKIIFNNNNFDFSQPFRRLTMTDSILEFNSTI 340

Query: 300 HNVTEHFVHSEFRVFSKILSVN 321
            + ++     + R F+K + + 
Sbjct: 341 TS-SDLKDFYKIREFAKSIGIK 361



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           EKK+         P       + ND+      +++L   G+EI +G    +  E     F
Sbjct: 381 EKKLIQPTFITQYPVEVSPLARRNDINLNITDRFELFIGGYEIGNGFSELNDVEDQKTRF 440

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            N        +N+          A + G+PP  G+  GIDR++M+L    ++R+V LFP
Sbjct: 441 LNQIQKSNKEDNKNLFYDKEYIEALKYGLPPTSGLGIGIDRLIMILTNQISIRDVILFP 499


>gi|242037499|ref|XP_002466144.1| hypothetical protein SORBIDRAFT_01g002140 [Sorghum bicolor]
 gi|241919998|gb|EER93142.1| hypothetical protein SORBIDRAFT_01g002140 [Sorghum bicolor]
          Length = 580

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 66/344 (19%), Positives = 135/344 (39%), Gaps = 30/344 (8%)

Query: 5   RTHSCGDLGVSDV----GSF-----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           RTH+  +L         G       V ++G +   R  G ++F+ +RD  G  Q+    D
Sbjct: 92  RTHTTKELQEQYAHLVNGEVCEDVSVSVAGRIVARRAFGKLVFMTVRDDSGTMQLYCEKD 151

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           S   +  + +++   +   G ++  S          G++ +  +  EIL+ +  LPLP  
Sbjct: 152 SLTEDQFEQLKAFIDI---GDILGASGSIKKTE--KGELSVYVKNFEILTKSL-LPLPDK 205

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                    R++ R++D+     +      R ++++ +R  M +  FIE  TP+L  ++ 
Sbjct: 206 YHGLTDVDKRYRQRYVDMIANPKVADVFRTRAKVVSEIRKTMESFGFIEVETPVLQGAAG 265

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+      Q   Y L  A + + + ++  G ++ ++I   FR+E   +   P E
Sbjct: 266 GAEARPFITYHNSLQRDLY-LRIATELHLKRMLVGGLEKVYEIGRIFRNEGISTRHNP-E 323

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  ++M  ++ + + ++N  E ++            V      I  +   RR        
Sbjct: 324 FTTIEMYEAYSDYESMMNMAEEIVTRCAMATHGKLKVDYEGTEISLERPWRRE------- 376

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
                MH++ +     +F  F  + S     +       G   +
Sbjct: 377 ----TMHSLVKEATGIDFNSFGDVESAKRAVKGLPGFEVGNNES 416



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 22/109 (20%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVM---------------LQAFSNVGISKEVVENR 521
               +++L   G EI +                                V  ++   ++ 
Sbjct: 466 GLTERFELFICGREIGNAFSELTDPIDQRSRFENQIKQHNVKRAAMAKEVKSTEGDGDDD 525

Query: 522 FGG-------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +            + + GMPP  G+  GIDR+VMLL  + ++R+V  FP
Sbjct: 526 YSYEVSLDEDFLTSLEYGMPPASGMGLGIDRLVMLLTNSSSIRDVIAFP 574


>gi|218296573|ref|ZP_03497301.1| lysyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243115|gb|EED09647.1| lysyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 492

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 66/305 (21%), Positives = 121/305 (39%), Gaps = 35/305 (11%)

Query: 2   HRYR---THSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           + YR    HS   +  +  G          V L+G V  +R  G + F  + D  G  Q+
Sbjct: 23  YPYRFPKAHSARAILEAKAGAPPETEWPEEVALAGRVVAIRRMGKVTFAHLLDESGRIQL 82

Query: 51  VANPDSAC-FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
               D    +E+ K +    +L + G +             TG++ +       L  +  
Sbjct: 83  YFQKDLTPRYELLKKLDVGDILGVKGPL---------FTTKTGEVTVKVLSWTPLVKSL- 132

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPI 168
            PLP        + +R++ R+LDL  +   +    +R+ ++  +R       F+E  TPI
Sbjct: 133 HPLPDKWHGLKDKEVRYRQRYLDLIVNPEVREVFRRRSEMVRYIRRFFEDRGFLEVETPI 192

Query: 169 LTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L A++    AR F          F+ L  + + Y + L+  G+++ F+I   FR+E    
Sbjct: 193 LQATTGGAEARPFKTYHNALDHEFF-LRISLELYLKRLLVGGYEKVFEIGRVFRNEGIDH 251

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRIC 278
           +  P EF  L+   ++ +  D+   +E +L G+         V            F RI 
Sbjct: 252 NHNP-EFTMLEAYWAYADYQDMALLVEELLSGLVLHLFGTYEVPYQGRILNFKPPFRRIS 310

Query: 279 YDDAI 283
           + +A+
Sbjct: 311 FVEAL 315



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 54/150 (36%), Gaps = 26/150 (17%)

Query: 422 QELGI-INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           +  G+ +     +  ++ DFP             A +P          L           
Sbjct: 353 KLFGLYVEPELQDPTFVFDFPL------------AISPLAKRHREKPGL---------TE 391

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           ++DL   G E+A      +      + F      ++  +            A + GMPP 
Sbjct: 392 RWDLFAGGMELAPAYSELNDPLDQRERFLEQARRRKEGDEEAPEPDEDFLLALEYGMPPA 451

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+  GIDR+ MLL    ++R+V LFP+ +
Sbjct: 452 AGLGLGIDRLAMLLTDQASLRDVLLFPLMK 481


>gi|159904285|ref|YP_001551629.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|238687128|sp|A9BD62|SYK_PROM4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|159889461|gb|ABX09675.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 503

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 66/363 (18%), Positives = 130/363 (35%), Gaps = 35/363 (9%)

Query: 6   THSCGDLGVSDV----GSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           TH    L V       G      V ++G V   R  G + F  + D  G  Q+     + 
Sbjct: 30  THKAAVLQVEHQDLANGQERQLEVCVAGRVISRRVMGKLAFFTLSDESGSIQLFLEKATL 89

Query: 58  CF------EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
                   E   S      L   G  +  +      +   G++ +      +L  + + P
Sbjct: 90  EEHSDLDQESPGSFSQLTDLVDSGDWIGVNGILRRTD--RGELSIKVFSWTMLCKSLQ-P 146

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT 170
           LP           R++ R++DL  +   +   + R  +++++R  +   +F+E  TP+L 
Sbjct: 147 LPDKWHGLSDVEKRYRQRYVDLIVNPQSRKTFRSRALMVSAIRRWLDERDFLEIETPVLQ 206

Query: 171 ASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
           + +    AR F+        S Y L  A + + + L+  GF+R +++   FR+E   +  
Sbjct: 207 SEAGGAEARPFITHHNTLDLSLY-LRIATELHLKRLVVGGFERVYELGRIFRNEGISTRH 265

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  +++  +F +  D+++  E ++  V  +     T+      +      RR    
Sbjct: 266 NP-EFTTVEIYQAFADYTDMMDLTEEMISFVCSQICGSTTIQYQGKEVDLTPPWRR---- 320

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNP---GYEVWAIPAKGGGGNRAFCDRMNE 346
                  I MH +       +F  F + +S            +P       R   +   +
Sbjct: 321 -------ITMHELVLESTGLDFYEFGQDISKASTAMQSVGLNVPDHADSVGRLMNEAFEQ 373

Query: 347 WAR 349
              
Sbjct: 374 AVE 376



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 51/141 (36%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +  + F+  ++MD+P      E   +   H                        +++L  
Sbjct: 375 VEGDLFQPTFVMDYPI-----EISPLARKHR----------------SKPGIVERFELFI 413

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAG 542
            G E A+            +        ++  +            A + GMPP GG+  G
Sbjct: 414 AGRETANAFSELIDPVDQKERLLLQQSRRQAGDLEAHVIDEDFVNALEVGMPPTGGLGIG 473

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR+VMLL  + ++R+V  FP
Sbjct: 474 IDRLVMLLTDSPSIRDVIAFP 494


>gi|323126879|gb|ADX24176.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 500

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 61/332 (18%), Positives = 123/332 (37%), Gaps = 26/332 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L             ++     ++G +   R  G + F  ++D  G  Q+    
Sbjct: 41  RTANSAELKEKYADKTKEELHELNETAIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRK 100

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   +  +  +   +    G  +    E +  ++  G++ + A K+  LS +   PLP 
Sbjct: 101 DSVGEDNYEIFKKADL----GDFIGVEGEVMRTDM--GELSIKATKLTHLSKSLR-PLPE 153

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R LDL  +       V R+++I+ +R  +   +F+E  TP+L   +
Sbjct: 154 KFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETPVLHNEA 213

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    V     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 214 GGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 272

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI+N  E +++   +       +      I  ++  +R        
Sbjct: 273 FTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFKRVHMVDA-- 330

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                +  VT      E  V   I        
Sbjct: 331 -----IKEVTGVDFWPEMTVEEAIALAKEKQV 357



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      F  P       K N   +    +++L     E A+   
Sbjct: 369 IINAFFEEFVEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFT 426

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 427 ELNDPIDQLSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTN 486

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 487 TTTIRDVLLFPTMK 500


>gi|294619950|ref|ZP_06699323.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291593807|gb|EFF25308.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1679]
          Length = 432

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 72/299 (24%), Positives = 118/299 (39%), Gaps = 32/299 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEW 69
             + VG  V +  WV   R  G I FL +RD         V +      F+ AK++  E 
Sbjct: 9   SKNHVGETVTIGAWVANKRSSGKIAFLQLRDGTAFFQGVVVKSEVPEEVFQTAKNLHQET 68

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G +   S             E+    +E++S + + P+     +E+       +R
Sbjct: 69  SVLVTGEIREDSRSKF-------GYEIGITNVEVVSESHDYPITP---KEHGTDFLMDHR 118

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR    H  +  R  II +        +F++   PILT S+PEG  D    +  +Q 
Sbjct: 119 HLWLRSSRQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEGTTDLFETNYFDQK 178

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F  Q++ 
Sbjct: 179 AY--LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTHQEES 235

Query: 250 LNTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPD 292
           L   E  +  + +   +                       F RI YDDAI     +  D
Sbjct: 236 LEVQEQYVAFLVQNILDHCEYALDVLGRDKEVLKTYTKLPFPRITYDDAIELLKKNGFD 294



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 38/113 (33%), Gaps = 10/113 (8%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
              A  PF M               I    Y       EI  G  R    + +L+   N 
Sbjct: 323 YPKAIKPFYMKPHPTREDVVICADMIAPEGY------GEIIGGSERATDYDFLLEQIRNH 376

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G+ ++     +       + G  PH G   G++R V  + G  +VRE   FP 
Sbjct: 377 GLDEKE----YSWYLDLRKYGSVPHSGFGLGLERTVTWIAGIDHVREAIPFPR 425


>gi|168058919|ref|XP_001781453.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667090|gb|EDQ53728.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 589

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 64/332 (19%), Positives = 128/332 (38%), Gaps = 32/332 (9%)

Query: 5   RTHSCGDLGVSDVG-----------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RTH+  +L    V              V ++G +   R  G + FL +RD  G  Q+   
Sbjct: 96  RTHTAAELQKQYVDLPSATEANEEKDHVAVAGRIIARRVFGKLAFLTMRDDSGDIQLYCE 155

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
                 E    +++   L   G  +             G++ +   ++ IL+ +  LPLP
Sbjct: 156 KAKLTDEAFDQLKT---LMDIGDFIGAKGTMKRTE--KGELSVLVGELSILTKSL-LPLP 209

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS 172
                      R++ R++D+  +     + + R +II+ +R  M +  ++E  TP+L   
Sbjct: 210 DKWHGLTDVEKRYRQRYVDMIMNPDVATVFRDRAKIISEIRRHMESLGYLEIETPVLQGE 269

Query: 173 SPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F+          Y L  A + + + ++  GF+R ++I   FR+E   +   P
Sbjct: 270 AGGADARPFVTHHNALGQDMY-LRIATELHLKRMVVGGFERVYEIGRIFRNEGISTRHNP 328

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF  +++  ++ + DD++N  E ++       +   +++     I      +R      
Sbjct: 329 -EFTSIELYQAYADYDDMMNLAEEIVEKCALTVNGSLSLTYQGTEISLQRPWKR------ 381

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
                  MH++ E      F  F   +     
Sbjct: 382 -----ASMHSLVEEVTGINFASFGDDIEAAKN 408



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 43/136 (31%), Gaps = 27/136 (19%)

Query: 459 FTMPQGGMESLKGNDLLS--IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F M      S       S      +++L   G E+A+              F     +  
Sbjct: 453 FVMDHPVEISPLAKPHRSKPGLVERFELFVYGREMANAFSELTDPIEQRSRFEAQVRTHN 512

Query: 517 VVENRF-------------------------GGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                                               A + GMPP  G+  GIDR+VMLL 
Sbjct: 513 AAMAAAAEAAKAKGDTALTSAINDAYEVGMDEDFVTALEYGMPPTAGMGIGIDRLVMLLT 572

Query: 552 GAKNVREVSLFPMSQN 567
            + ++R+V  FP+ ++
Sbjct: 573 DSASIRDVIAFPVMKS 588


>gi|219682343|ref|YP_002468727.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|219622076|gb|ACL30232.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|311086168|gb|ADP66250.1| lysyl-tRNA synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon
           pisum)]
 gi|311086740|gb|ADP66821.1| lysyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 506

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 69/322 (21%), Positives = 137/322 (42%), Gaps = 13/322 (4%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y+T +  +L   ++   V ++G + + R  G   F  ++D  G  Q+  N      + 
Sbjct: 51  QKYQTKNRNELISLNI--EVSIAGRMVQRRIMGKASFFTLQDIEGKIQIYINEKKISSDF 108

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
               R  +     G ++            TG++ +  + + IL+ + + PLP        
Sbjct: 109 Y---RFHFKKWDIGDILGVIGTLF--KTKTGELSIYCKNVTILNKSLK-PLPDKFHGLSN 162

Query: 122 ESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           + IR++ R+LDL   + L+     R+ II ++R  MI  +F+E  TP+L        AR 
Sbjct: 163 QEIRYRKRYLDLISNNKLYSIFKNRSNIITAIRNFMIENDFLEVETPMLQNIPGGANARP 222

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  GF+R F++   FR+E   +   P EF  ++ 
Sbjct: 223 FITYHNEIDSQMY-LRIAPELYLKKLIIGGFERIFELNRNFRNEGVSARHNP-EFTMMEA 280

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            +++   +D++   EN+ + + +     N +  N     +    RR       L     +
Sbjct: 281 YIAYSNYEDMMELTENLFKSITKFLFQDNKIIFNNNNFDFSQPFRRLTMTDSILEFNSTI 340

Query: 300 HNVTEHFVHSEFRVFSKILSVN 321
            + ++     + R F+K + + 
Sbjct: 341 TS-SDLKDFYKIREFAKSIGIK 361



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           EKK+         P       + ND+      +++L   G+EI +G    +  E     F
Sbjct: 381 EKKLIQPTFITQYPVEVSPLARRNDINLNITDRFELFIGGYEIGNGFSELNDVEDQKTRF 440

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            N        +N+          A Q G+PP  G+  GIDR++M+L    ++R+V LFP
Sbjct: 441 LNQIQKSNKEDNKNLFYDKEYIEALQYGLPPTSGLGIGIDRLIMILTNQISIRDVILFP 499


>gi|148238513|ref|YP_001223900.1| lysyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|166230596|sp|A5GI38|SYK_SYNPW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|147847052|emb|CAK22603.1| Lysyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 489

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 58/322 (18%), Positives = 124/322 (38%), Gaps = 28/322 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK---SVRSEWVLCIDGLV 77
           V ++G V   R  G + F  + D  G  Q+     +     A+    V +  ++ + G +
Sbjct: 53  VAVAGRVMTRRVMGKLAFFTLADETGTIQLFLEKAALGEAFAQITSLVDAGDLIGVRGTL 112

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                         G++ +   +  +L+ + + PLP           R++ R+LDL    
Sbjct: 113 RRTDR---------GELSVKVAEWTMLTKSLQ-PLPDKWHGLADVEKRYRQRYLDLIVTP 162

Query: 138 LHKNIVKRTRI-INSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALP 195
             +   +R  + ++++R  +    F+E  TP+L + +    AR F+          Y L 
Sbjct: 163 QSRETFRRRALTVSAIRRWLDEREFLEIETPVLQSEAGGADARPFITHHNTLDLPLY-LR 221

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + + + L+  GF+R +++   FR+E   +   P EF  +++  ++ +   ++   E+
Sbjct: 222 IATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP-EFTSVEVYQAYADYLGMIELTES 280

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++  V E+   G  ++     I      RR             MH + E     +F  F+
Sbjct: 281 MIASVCEQVCGGTRLTYQGTEIDLTPPWRR-----------ATMHELVEEATGLDFTAFA 329

Query: 316 KILSVNPGYEVWAIPAKGGGGN 337
              +         +P      +
Sbjct: 330 DRAAAAEAMTAKGLPVPDKADS 351



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +  N  +  +++D+P     EE   +   H                        +++L  
Sbjct: 364 VEANLIQPTFVLDYP-----EEISPLARKHR----------------SKPGLVERFELFI 402

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAG 542
            G E A+                     +   +    G      +A + GMPP GG+  G
Sbjct: 403 VGRETANAFSELIDPVDQRGRLEAQQARRAAGDEEAQGVDEDFLQALEVGMPPTGGLGIG 462

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR+VMLL  + ++R+V  FP
Sbjct: 463 IDRLVMLLTDSPSIRDVIAFP 483


>gi|327470680|gb|EGF16136.1| lysine--tRNA ligase [Streptococcus sanguinis SK330]
 gi|332358916|gb|EGJ36737.1| lysine--tRNA ligase [Streptococcus sanguinis SK49]
 gi|332362485|gb|EGJ40285.1| lysine--tRNA ligase [Streptococcus sanguinis SK1056]
 gi|332367177|gb|EGJ44913.1| lysine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 496

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 56/288 (19%), Positives = 117/288 (40%), Gaps = 11/288 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L   ++     ++G +   R  G + F  I+D  G  Q+    D+   E 
Sbjct: 46  EKYNDKDKEELN--ELNETAIIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGEEN 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +   +    G  +    E +  ++  G++ + A  +  LS A   PLP        
Sbjct: 104 YEIFKKADL----GDFLGIEGEIMRTDM--GELSIKATHLTHLSKALR-PLPEKFHGLTD 156

Query: 122 ESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A   
Sbjct: 157 VETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAARP 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++ 
Sbjct: 217 FITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVY 275

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
            ++ +  DI++  E +++      +    V+     I  ++  +R   
Sbjct: 276 QAYADFQDIMDLTEGIIQHAAVSVNGDGPVNYQGTEIKINEPFKRVHM 323



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           +++  F E+ EE   +      +  P       K N        +++L     E A+   
Sbjct: 365 VINAFFEEFVEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+VMLL  
Sbjct: 423 ELNDPIDQLSRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTD 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 VTTIRDVLLFPTMK 496


>gi|327461043|gb|EGF07376.1| lysine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 496

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 56/288 (19%), Positives = 117/288 (40%), Gaps = 11/288 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L   ++     ++G +   R  G + F  I+D  G  Q+    D+   E 
Sbjct: 46  EKYNDKDKEELN--ELNETAIIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGEEN 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +   +    G  +    E +  ++  G++ + A  +  LS A   PLP        
Sbjct: 104 YEIFKKADL----GDFLGIEGEIMRTDM--GELSIKATHLTHLSKALR-PLPEKFHGLTD 156

Query: 122 ESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A   
Sbjct: 157 VETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAARP 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++ 
Sbjct: 217 FITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVY 275

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
            ++ +  DI++  E +++      +    V+     I  ++  +R   
Sbjct: 276 QAYADFQDIMDLTEGIIQHAAVSVNGDGPVNYQGTEIKINEPFKRVHM 323



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           +++  F E+ EE   +      +  P       K N        +++L     E A+   
Sbjct: 365 VINAFFEEFVEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+VMLL  
Sbjct: 423 ELNDPIDQLSRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTD 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 VTTIRDVLLFPTMK 496


>gi|311107123|ref|YP_003979976.1| lysyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310761812|gb|ADP17261.1| lysyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 507

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 65/312 (20%), Positives = 129/312 (41%), Gaps = 23/312 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+++G +   R  G   F  ++D  G  Q+  +  +   +   + +   +    G +++
Sbjct: 66  TVKVAGRMMLKRVMGKASFATLQDSTGRIQIYLDRGTLGEDSYAAFKQWDI----GDIIA 121

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTL 138
                   N   G++ + A    +LS +   PLP        + +R++ R++DL   D  
Sbjct: 122 IEGSVFKTN--KGELSVHAASARLLSKSLR-PLPDKFHGVADQELRYRQRYVDLIMTDAT 178

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            +    R++ + S+R  M+   F+E  TP+L        A+ F+          Y L  A
Sbjct: 179 RRTFEARSKAVGSIRQFMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMEMY-LRIA 237

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E   S R   EF  ++   +F E   +++  E ++
Sbjct: 238 PELYLKRLIVGGFERVFEVNRNFRNEGV-SPRHNPEFTMMEFYAAFAEYRWLMDFTEELI 296

Query: 258 R---------GVFEEFSNGNTVSNNFLRICYDDAIRRY--GTDKPDLRN-PIIMHNVTEH 305
           R          V         +S  F R+   +AI +Y  G  +  L +   +   + + 
Sbjct: 297 RQAAISATGSAVLTYGERELDLSKPFDRLTICEAILKYAPGYTQAQLDDAAFVRAELKKL 356

Query: 306 FVHSEFRVFSKI 317
              ++  V S+ 
Sbjct: 357 GADADGPVLSRA 368



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 63/162 (38%), Gaps = 27/162 (16%)

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
           P+   +     +  + +E        +   +I+D+P                        
Sbjct: 363 PVLSRAGLGALQLALFEE--TAEAKLWNPTYIIDYP---------------------VEV 399

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
               + +D       +++L   G EIA+G    +  E   + F +   +K+  +      
Sbjct: 400 SPLARASDTREGITERFELFMTGREIANGFSELNDPEDQAERFRSQVEAKDAGDEEAMFY 459

Query: 526 ----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                RA + GMPP GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 460 DADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVILFP 501


>gi|300312097|ref|YP_003776189.1| lysyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300074882|gb|ADJ64281.1| lysyl-tRNA synthetase (Class II) protein [Herbaspirillum
           seropedicae SmR1]
          Length = 513

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 25/289 (8%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGI-----TQVVANPDSACFEIAKSVRSEWVLCID 74
            V ++G +   R  G   F  ++D  G+      Q+    D    E   + +   +  I 
Sbjct: 67  TVTVAGRMMLKRVMGKAAFATLQDASGVRADGRIQLYITRDVTGEEAMAAFKHYDLGDIL 126

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G      AE       TG++ +   K+++++ +   PLP        + ++++ R++DL 
Sbjct: 127 G------AEGTLFKTKTGELSVKVTKLKLITKSLR-PLPDKFHGLADQEMKYRQRYVDLI 179

Query: 135 R-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
             +   +    RT  ++S+R  M    F+E  TP+L        A+ F+          +
Sbjct: 180 MSEETRRTFKARTAAMSSIRRFMETHGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMF 239

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++V+   ++  
Sbjct: 240 -MRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYVDYQWLMGF 297

Query: 253 MENVLR---------GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
            E V+R          V         +S  F R+    AI +Y  +  +
Sbjct: 298 TEQVIRQAAIDAHGTAVLSYQGRELDLSKPFDRLTITGAILKYAPNYTE 346



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +  +     P       + +D ++    +++L   G EIA+G    + +
Sbjct: 383 LFEETAESQLWNPTY-IIDYPVEVSPLARASDTVAGITERFELFITGREIANGFSELNDA 441

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F     +K+  +           RA + GMPP GG   GIDR++ML+  + N+R
Sbjct: 442 EDQAARFHAQVAAKDAGDEEAMYYDADYIRALEYGMPPAGGCGIGIDRLMMLITDSPNIR 501

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 502 DVILFP 507


>gi|194476928|ref|YP_002049107.1| lysyl-tRNA synthetase [Paulinella chromatophora]
 gi|171191935|gb|ACB42897.1| lysyl-tRNA synthetase [Paulinella chromatophora]
          Length = 519

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 57/323 (17%), Positives = 123/323 (38%), Gaps = 21/323 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEW 69
              +    V ++G V   R  G + F  + D  G+ Q+     +    ++          
Sbjct: 45  NGEERNLTVAIAGRVMAKRVMGKLAFFTLADETGLIQLYIEKATLAISMSGDSLAFSHLT 104

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L   G ++             G++ +  +K  +L+ +   PLP           R++ R
Sbjct: 105 SLVDTGDLIGIYGTLRRTE--RGELSVRVKKWHMLTKSL-HPLPDKWHGLADVEKRYRQR 161

Query: 130 FLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVN 187
           +LDL       + + +R ++++ +R  +    F+E  TP+L   +    AR F+      
Sbjct: 162 YLDLIVSPQTRETLRRRAQVVSGIRRWLDEREFLEIETPVLHVEAGGAEARPFITQHNTL 221

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A + + + L+  GF+R +++   FR+E   S   P EF  +++  ++ +  
Sbjct: 222 DLPLY-LRIATELHLKRLVVGGFERVYELGRIFRNEGVSSRHNP-EFTSVEIYQAYADYT 279

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
           D+++  E ++  +  +    + +      I      RR             MH + +   
Sbjct: 280 DMMDLTEQLIDTIANQVCGTSKIEYQEEIIDLTPPWRR-----------ATMHELVKEAT 328

Query: 308 HSEFRVFSKILSVNPGYEVWAIP 330
             +F +FS   + +    +  I 
Sbjct: 329 GLDFTLFSDYETASEAITLSGIM 351



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 63/193 (32%), Gaps = 27/193 (13%)

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
           + K    ++           +  +   I    L   S      N+I +    +     + 
Sbjct: 323 LVKEATGLDFTLFSDYETASEAITLSGIMLSKLDAQSSVGHLLNYIFE--NAVEHTLIQP 380

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            ++ D+P      E   +   H                   S    +++L   G E A+ 
Sbjct: 381 TFVTDYPI-----EISPLARKHR----------------NKSGLVERFELFIVGRETANA 419

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
                      +      + ++  +           +A + GMPP GG+  GIDR+ MLL
Sbjct: 420 FSELIDPIDQRERLEAQQLRRQAGDLEANMIDEDFLQALEVGMPPTGGLGIGIDRLTMLL 479

Query: 551 LGAKNVREVSLFP 563
             + ++R+V  FP
Sbjct: 480 TNSPSIRDVIAFP 492


>gi|15617036|ref|NP_240249.1| lysyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219681788|ref|YP_002468174.1| lysyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471490|ref|ZP_05635489.1| lysyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon
           pisum)]
 gi|11134965|sp|P57512|SYK_BUCAI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|25293056|pir||G84980 lysine-tRNA ligase (EC 6.1.1.6) [imported] - Buchnera sp.  (strain
           APS)
 gi|10039101|dbj|BAB13135.1| lysyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219624631|gb|ACL30786.1| lysyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
          Length = 506

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 69/322 (21%), Positives = 137/322 (42%), Gaps = 13/322 (4%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y+T +  +L   ++   V ++G + + R  G   F  ++D  G  Q+  N      + 
Sbjct: 51  QKYQTKNRNELISLNI--EVSIAGRMVQRRIMGKASFFTLQDIEGKIQIYINEKKISSDF 108

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
               R  +     G ++            TG++ +  + + IL+ + + PLP        
Sbjct: 109 Y---RFHFKKWDIGDILGVIGTLF--KTKTGELSIYCKNVTILNKSLK-PLPDKFHGLSN 162

Query: 122 ESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           + IR++ R+LDL   + L+     R+ II ++R  MI  +F+E  TP+L        AR 
Sbjct: 163 QEIRYRKRYLDLISNNKLYSIFKNRSNIITAIRNFMIENDFLEVETPMLQNIPGGANARP 222

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  GF+R F++   FR+E   +   P EF  ++ 
Sbjct: 223 FITYHNEIDSQMY-LRIAPELYLKKLIIGGFERIFELNRNFRNEGVSARHNP-EFTMMEA 280

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            +++   +D++   EN+ + + +     N +  N     +    RR       L     +
Sbjct: 281 YIAYSNYEDMMELTENLFKSITKFLFQDNKIIFNNNNFDFSQPFRRLTMTDSILEFNSTI 340

Query: 300 HNVTEHFVHSEFRVFSKILSVN 321
            + ++     + R F+K + + 
Sbjct: 341 TS-SDLKDFYKIREFAKSIGIK 361



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           EKK+         P       + ND+      +++L   G+EI +G    +  E     F
Sbjct: 381 EKKLIQPTFITQYPVEVSPLARRNDINLNITDRFELFIGGYEIGNGFSELNDVEDQKTRF 440

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            N        +N+          A + G+PP  G+  GIDR++M+L    ++R+V LFP
Sbjct: 441 LNQIQKSNKEDNKNLFYDKEYIEALKYGLPPTSGLGIGIDRLIMILTNQISIRDVILFP 499


>gi|19745706|ref|NP_606842.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|139474193|ref|YP_001128909.1| lysyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|39932219|sp|Q8P1X6|SYK_STRP8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|73919758|sp|Q5XD62|SYK_STRP6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166230592|sp|A2RFR7|SYK_STRPG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|19747842|gb|AAL97341.1| putative lysyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|134272440|emb|CAM30696.1| lysyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 497

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 61/332 (18%), Positives = 123/332 (37%), Gaps = 26/332 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L             ++     ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTANSAELKEKYADKTKEELHELNETAIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   +  +  +   +    G  +    E +  ++  G++ + A K+  LS +   PLP 
Sbjct: 97  DSVSEDNYEIFKKADL----GDFIGVEGEVMRTDM--GELSIKATKLTHLSKSLR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R LDL  +       V R+++I+ +R  +   +F+E  TP+L   +
Sbjct: 150 KFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETPVLHNEA 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    V     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 210 GGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI+N  E +++   +       +      I  ++  +R        
Sbjct: 269 FTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFKRVHMVDA-- 326

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                +  VT      E  V   I        
Sbjct: 327 -----IKEVTGVDFWPEMTVEEAIALAKEKQV 353



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      F  P       K N   +    +++L     E A+   
Sbjct: 365 IINAFFEEFVEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 423 ELNDPIDQLSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTN 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 TTTIRDVLLFPTMK 496


>gi|325687234|gb|EGD29256.1| lysine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 496

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 55/288 (19%), Positives = 117/288 (40%), Gaps = 11/288 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L   ++     ++G +   R  G + F  I+D  G  Q+    D+   E 
Sbjct: 46  EKYNAKDKEELN--ELNETAIIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGEEN 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +   +    G  +    E +  ++  G++ + A  +  LS A   PLP        
Sbjct: 104 YEIFKKADL----GDFLGIEGEIMRTDM--GELSIKATHLTHLSKALR-PLPEKFHGLTD 156

Query: 122 ESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A   
Sbjct: 157 VETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAARP 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++ 
Sbjct: 217 FITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVY 275

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
            ++ +  DI++  E +++      +    ++     I  ++  +R   
Sbjct: 276 QAYADFQDIMDLTEGIIQHAAVSVNGDGPINYQGTEIKINEPFKRVHM 323



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           +++  F E+ EE   +      +  P       K N        +++L     E A+   
Sbjct: 365 VINAFFEEFVEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+VMLL  
Sbjct: 423 ELNDPIDQLSRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTD 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 VTTIRDVLLFPTMK 496


>gi|315282918|ref|ZP_07871218.1| asparaginyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613436|gb|EFR87280.1| asparaginyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 430

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 31/294 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDIFATAKALTQETSLFV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +             E++   +E++S + + P+     +E+       +R L L
Sbjct: 72  TGTINEDTRSPF-------GYEMAVSGVEVISESHDYPITP---KEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +  H  +  R  II +       E F++   PILT S+PEG  +        + +F  
Sbjct: 122 RSNRQHAIMKIRNEIIRASYEFFNQEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L   
Sbjct: 180 LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQVQ 238

Query: 254 ENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRYGTDKPD 292
           EN +  + +   +   +                  F RI Y +AI R      D
Sbjct: 239 ENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIERLHELGFD 292



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 46/124 (37%), Gaps = 14/124 (11%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN--GFEIASGGIRNHM 500
           +E          A  PF MP+        ND + + A   D++      EI  G  R H 
Sbjct: 312 FEKPVFITHYPKAIKPFYMPED-----PENDQVVLCA---DMIAPEGYGEIIGGSERIHD 363

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            E +     +  +     +  +       + G  PH G   G++R V  + G ++VRE  
Sbjct: 364 LETLQARMEDFDLD----QEAYSWYLDLARYGSVPHSGFGLGLERTVAWISGTEHVRETI 419

Query: 561 LFPM 564
            FP 
Sbjct: 420 PFPR 423


>gi|237712336|ref|ZP_04542817.1| lysyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|265752046|ref|ZP_06087839.1| lysyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|229453657|gb|EEO59378.1| lysyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263236838|gb|EEZ22308.1| lysyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 576

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 118/276 (42%), Gaps = 10/276 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +    +    V ++G +   R  G   F++++D  G  QV    D  C + 
Sbjct: 36  NAFSTDIKAEFKDDEEPRKVSVAGRMMSRRVMGKASFIELQDSKGRIQVYITRDDICPDE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + A+K+ +LS + +    V  +    
Sbjct: 96  NKELYNTVFKRLLDLGDFVGIEGFVFRTQMGEISIHAKKLTVLSKSIKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R++DL  +   K   +KR+++ +SMR    ++ ++E  TPIL + + 
Sbjct: 156 YDKFEDPELRYRQRYVDLAVNEEVKDIFIKRSKVFSSMREYFNSKGYMEVETPILQSIAG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y +  A + Y + L+  GF+  ++I   FR+E       P E
Sbjct: 216 GAAARPFITHHNALDMPLY-MRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
           F  +++ +++ + + ++   E ++  +  + +    
Sbjct: 274 FTCMEIYVAYKDYNWMMEFTEKMIEKICLDVNGTTQ 309



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 13/138 (9%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+ NG E+ +     +     L+ F
Sbjct: 378 EGTYIQPTFITDYPKEMSPLTKIHRSNPDLTERFELMVNGKELCNAYSELNDPIDQLERF 437

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  E  ++          RA + GMPP  G+  G+DR+ ML+ G   ++EV  FP 
Sbjct: 438 EEQMRLSEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFPQ 497

Query: 565 SQNFCDLLMGSPSTVSVE 582
            +         P  V+ +
Sbjct: 498 MR---------PEKVTPK 506


>gi|317405232|gb|EFV85570.1| lysyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 507

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 62/312 (19%), Positives = 129/312 (41%), Gaps = 23/312 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+++G +   R  G   F  ++D  G  Q+  +  +   +   + +   +    G +++
Sbjct: 66  TVKVAGRMMLKRVMGKASFATLQDSTGRIQIYLDRGTLGEDSYAAFKQWDI----GDIIA 121

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTL 138
                   N   G++ + A    +LS +   PLP        + +R++ R++DL   D  
Sbjct: 122 VEGSVFKTN--KGELSVHAATARLLSKSLR-PLPDKFHGVADQELRYRQRYVDLIMTDAT 178

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            +    R++ + S+R  M+   F+E  TP+L        A+ F+          + L  A
Sbjct: 179 RRTFEARSKAMGSIRQFMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMEMF-LRIA 237

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F++   FR+E   S R   EF  ++   +F +   +++  E ++
Sbjct: 238 PELYLKRLIVGGFERVFEVNRNFRNEGV-SPRHNPEFTMMEFYAAFADYRWLMDFTEELI 296

Query: 258 R---------GVFEEFSNGNTVSNNFLRICYDDAIRRY--GTDKPDLRN-PIIMHNVTEH 305
           R          V         +S  F R+   +AI +Y  G  +  L +   +   + + 
Sbjct: 297 RQAAISATGSAVLTYQERELDLSKPFDRLTICEAILKYAPGYTQAQLDDVAFVRAELKKL 356

Query: 306 FVHSEFRVFSKI 317
              ++  V ++ 
Sbjct: 357 GADADGPVLARA 368



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 63/162 (38%), Gaps = 27/162 (16%)

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
           P+   +     +  + +E        +   +I+D+P                        
Sbjct: 363 PVLARAGLGALQLALFEE--TAEAKLWNPTYIIDYP---------------------VEV 399

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF--- 522
               + +D       +++L   G EIA+G    +  E   + F +   +K+  +      
Sbjct: 400 SPLARASDTREGITERFELFMTGREIANGFSELNDPEDQAERFRSQVEAKDAGDEEAMYY 459

Query: 523 -GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                RA + GMPP GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 460 DADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVILFP 501


>gi|288817495|ref|YP_003431842.1| lysyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288786894|dbj|BAI68641.1| lysyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751102|gb|ADO44585.1| lysyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 567

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 68/366 (18%), Positives = 139/366 (37%), Gaps = 26/366 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            VRL+G +  +R  G  IF  ++D  G  Q+    D    E  K     + L   G V+ 
Sbjct: 130 QVRLAGRLVSLRSMGKAIFGHLQDATGKVQIYIKKDVVGDEKFKVFDDLFDL---GDVIG 186

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-L 138
                   +  TG++ +  Q  ++L+ +   PLP          +R++ R+LDL  +   
Sbjct: 187 VVGRLFRTS--TGELTVEVQDFKMLAKSL-HPLPEKWHGLKDVEVRYRQRYLDLISNEKA 243

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            +  + R+++++ +R  +    FIE  TP+L   +S   A+ F+      + + Y L  A
Sbjct: 244 RRITLLRSKLLSEIRKFLEERGFIEAETPVLQHIASGANAKPFITYHNYLEQNLY-LRIA 302

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R +++   FR+E   +   P EF  L+   ++ +  D++   + + 
Sbjct: 303 PELYLKRLIVGGFNRVYELGKNFRNEGVDTTHNP-EFTMLEFYCAYWDYKDLMEFTQELF 361

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
             + ++      ++     + +    + Y               + E     +       
Sbjct: 362 SHLLKKLVGSLKITYQNYTLDFTPPYKVYRY----------FDLLLEKTGKDKDFFLRHE 411

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAK 377
             V        IP      +    D++ +        G A++            + P+AK
Sbjct: 412 KEVRKLAAELGIPKAQELTHAKLLDKIFDVLVEDELIGPAFVIDFP------KLLSPLAK 465

Query: 378 HLNIVN 383
                 
Sbjct: 466 THREDE 471



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 59/173 (34%), Gaps = 10/173 (5%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD--FPFYEWNEEEKKIDF 454
           D      G    F          +A ELGI          ++D  F     +E       
Sbjct: 394 DLLLEKTGKDKDFFLRHEKEVRKLAAELGIPKAQELTHAKLLDKIFDVLVEDELIGPAFV 453

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM----LQAFSN 510
              P  +        +  DL+     +++L   G EIA+     +         LQ    
Sbjct: 454 IDFPKLLSPLAKTHREDEDLV----ERFELFVAGKEIANAYTELNDPIEQRDRFLQQIKE 509

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             +  E           A + GMPP  G   GIDR+VMLL    ++REV LFP
Sbjct: 510 KEMGDEEAMQMDEDFITALEYGMPPTAGEGIGIDRLVMLLADVDSIREVILFP 562


>gi|324994794|gb|EGC26707.1| lysine--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 496

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 56/288 (19%), Positives = 117/288 (40%), Gaps = 11/288 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L   ++     ++G +   R  G + F  I+D  G  Q+    D+   E 
Sbjct: 46  EKYNAKDKEELN--ELNETAIIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGEEN 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +   +    G  +    E +  ++  G++ + A  +  LS A   PLP        
Sbjct: 104 YEIFKKADL----GDFLGIEGEIMRTDM--GELSIKATHLTHLSKALR-PLPEKFHGLTD 156

Query: 122 ESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A   
Sbjct: 157 VETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAARP 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++ 
Sbjct: 217 FITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVY 275

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
            ++ +  DI++  E +++      +    V+     I  ++  +R   
Sbjct: 276 QAYADFQDIMDLTEGIIQHAAVSVNGDGPVNYQGTEIKINEPFKRVHM 323



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           +++  F E+ EE   +      +  P       K N        +++L     E A+   
Sbjct: 365 VINAFFEEFVEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+VMLL  
Sbjct: 423 ELNDPIDQLSRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTD 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 VTTIRDVLLFPTMK 496


>gi|320353431|ref|YP_004194770.1| asparaginyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320121933|gb|ADW17479.1| asparaginyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 459

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 58/273 (21%), Positives = 104/273 (38%), Gaps = 20/273 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH   T     L    VG  V +SGWV   R  G   FL+I D   +  +    +     
Sbjct: 1   MHT--TSIVDLLRRQPVGETVTISGWVRTRRDSGSFSFLEINDGSCLANLQLIAEEQLVN 58

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  V+        G  +      + +      +E+ A++IE++  A+    P+  +R  
Sbjct: 59  YASEVKK----LTTGCSLRAHGLLVASPAKGQTVEVRAERIEVIGWADPETYPLQKKRHS 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R     L  R + L      R+ +  ++        F++  TP++T S  EGA + 
Sbjct: 115 FEFLR-SIAHLRPRTNALGAVARVRSALSFAIHRFFHEHGFLQVHTPVITTSDCEGAGEM 173

Query: 181 LVPSRVNQG----------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
              + +  G           F+          Q +  + A    R +   P FR E   +
Sbjct: 174 FTVTALEPGQLQGPDPFNNDFFGRRAGLTVSGQLQAEIFALSHGRVYTFGPTFRAEHSNT 233

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            R   EF+ L+ EM+F +     +  E++++ +
Sbjct: 234 SRHLAEFWMLEPEMAFCDLAGNRDVAESLIKFL 266



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 52/153 (33%), Gaps = 26/153 (16%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
                E  +          + ++P                PF M          +D  ++
Sbjct: 330 LQAEHERFLCEEVAQAPVVVTNYP------------ADIKPFYMR-------LDDDGRTV 370

Query: 478 KAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
            A   D++  G  E+  G  R    EV+    +  G+       ++G      + G  PH
Sbjct: 371 AAM--DILVAGIGELIGGSQREERYEVLAARMAAAGLDL----AQYGWYLDLRRYGSVPH 424

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G   G +R+V  + G +N+R+V  FP +    
Sbjct: 425 SGFGLGFERLVQFVTGMQNIRDVIPFPRTPGSA 457


>gi|170079063|ref|YP_001735701.1| asparaginyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|226695303|sp|B1XKH1|SYN_SYNP2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|169886732|gb|ACB00446.1| asparaginyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 460

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 85/434 (19%), Positives = 153/434 (35%), Gaps = 68/434 (15%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---IAKSVRSE 68
           L  + + S +   GWV   R   G  F++I D   +  +    D    +   I K + + 
Sbjct: 7   LNTAAINSTITAEGWVKTKRELKGFSFIEISDGSTMNGLQVIIDGNLADYEAIIKKLNTG 66

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             +   GLV+    +         +IEL A+ + +   A+    P+  +R   E +R   
Sbjct: 67  AAVTATGLVVESPGKG-------QRIELQAKAVTVHGEADPETYPLQKKRHSFEFLR-TI 118

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  + +T+   +  R     ++        FI   TPI+TAS  EGA +    +  + 
Sbjct: 119 GHLRGKTNTMGAVMRVRNACATAIHQFFQERGFIWAHTPIITASDCEGAGEMFAVTNFDL 178

Query: 189 --------------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q +  +MA  F   +   P FR E+  + R  
Sbjct: 179 ANPKRTKEGAVDYAEDFFGRPAYLTVSGQLEAEVMAMAFKDVYTFGPTFRAENSNTSRHL 238

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTV 270
            EF+ ++ EM+F +     +  E  LR +F+                          N +
Sbjct: 239 AEFWMVEPEMAFCDIVGDQDLAEEFLRYIFKYVLEACPEDMEFFNKRIDNSVLATAQNII 298

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            N F RI Y +AI            P+   +   +EH  +    +F K L          
Sbjct: 299 ENEFARITYTEAIALLEKSNKTFEFPVEWGIDLQSEHERYLAEDLFKKPL---------- 348

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIR 388
           I +      +AF  R+N+      Q  +A +     + G + G     + L     E   
Sbjct: 349 IVSNYPKDIKAFYMRLND-----DQKTVAAMDVLAPKIGEIIGGSQREERL--DVLERRI 401

Query: 389 VRLDMQDGDSCFFI 402
             ++++  D  +++
Sbjct: 402 QEMNIEAADLWWYL 415



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    +V+ +    + I    +           + G  PH G   G +R+V  
Sbjct: 383 EIIGGSQREERLDVLERRIQEMNIEAADLW----WYLDLRRFGTVPHAGFGLGFERLVQF 438

Query: 550 LLGAKNVREVSLFPMSQ 566
           + G  N+R+V  FP + 
Sbjct: 439 MTGMGNIRDVIPFPRTP 455


>gi|319946598|ref|ZP_08020832.1| lysine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319746646|gb|EFV98905.1| lysine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 496

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 63/339 (18%), Positives = 123/339 (36%), Gaps = 28/339 (8%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT   G L             D+     ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTADSGQLKEKYSELDKEQLHDLNETAIIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+   E  +  +   +    G  +    E +  ++  G++ + A  I  LS A   PLP 
Sbjct: 97  DAVGEENYEIFKKADL----GDFLGVEGEVMRTDM--GELSIKATHITHLSKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +
Sbjct: 150 KFHGLSDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETPVLHNEA 209

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+            L  A + + + L+  G +R ++I   FR+E   +   P 
Sbjct: 210 GGASARPFITHHNAQNIDM-VLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP- 291
           EF  ++++ ++ +  DI++  E +++   +       V+     I  ++  +R       
Sbjct: 268 EFTSIEVDQAYADYQDIMDLTEGIIQHAAKAIHGDGPVNYQGTEIKINEPFKRVHMVDAI 327

Query: 292 ------DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
                 D    +               V      V    
Sbjct: 328 KEIAGVDFWQDMSFEEAVALAKEKHVPVEKHYTEVGHII 366



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      +  P       K ND       +++L     E A+   
Sbjct: 365 IINAFFEEYVEET--LTQPTFVYGHPVAVSPLAKKNDEDPRFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L+ F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 423 ELNDPIDQLERFEAQARAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTD 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 TTTIRDVLLFPTMK 496


>gi|123969360|ref|YP_001010218.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|123199470|gb|ABM71111.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 488

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 115/269 (42%), Gaps = 11/269 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK----SVRSEWVLCIDGL 76
           V ++G V   R  G I F  I D  G  Q+  +     F + K    S      +   G 
Sbjct: 38  VSIAGRVLAKRVMGKIAFFTISDQEGQIQLYLDKRIINFNLEKQKLLSFEDLKEIVDIGD 97

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            +         N   G++ +  +K E+LS + + PLP           R++ R+LDL  +
Sbjct: 98  WIGVYGTIKKTN--KGELSIKVEKWEMLSKSLQ-PLPDKWHGLTDIEKRYRQRYLDLIVN 154

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYAL 194
              KN+ K R + I+ +R  +   NF+E  TPIL + +    AR F+          Y L
Sbjct: 155 PHSKNVFKTRAKCISFIRKWLDNRNFLEIETPILQSEAGGAEARPFITHHNTLDIPLY-L 213

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + ++  GF++ +++   FR+E   +   P EF  +++  ++ +  D++N  E
Sbjct: 214 RIATELHLKRMVVGGFEKVYELGRIFRNEGISTRHNP-EFTSVEIYEAYSDYVDMMNLTE 272

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
            +++ +  +      ++     I +    
Sbjct: 273 ELIKDIVADACGSLIINYQNKEIDFSKPW 301



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 75/223 (33%), Gaps = 32/223 (14%)

Query: 348 ARSQGQPGLAYIFWRLDESGNVAGMG--PVAKHLNIVNTEAIR-VRLDMQDGDSCFFIAG 404
           A + G   + Y    +D S   + +    + K    ++ ++     L  +       +  
Sbjct: 280 ADACGSLIINYQNKEIDFSKPWSRISMKAIVKKYTGIDFDSFSGDFLAAKQAVKNINVDC 339

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
                 +      N + ++   +     E  +++D+P      E   +   H+       
Sbjct: 340 SNKV--NTMGRLLNEVFEQ--KVESKLVEPTFVIDYPV-----EISPLARPHH------- 383

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF-- 522
                           +++L   G E+A+            +        ++  +     
Sbjct: 384 ---------DNKQIVQRFELFIVGRELANAFSELIDPVDQRERMQLQQSLRDEGDLEAHC 434

Query: 523 --GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                  A + GMPP GG+  GIDR++ML+  + ++R+V  FP
Sbjct: 435 IDEDFLNALEIGMPPTGGLGIGIDRLIMLITNSASIRDVIPFP 477


>gi|33596660|ref|NP_884303.1| lysyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|39932130|sp|Q7W8T6|SYK_BORPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33573361|emb|CAE37345.1| lysyl-tRNA synthetase [Bordetella parapertussis]
          Length = 506

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 111/278 (39%), Gaps = 11/278 (3%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+++G +   R  G   F  ++D  G  Q+     +   E   + +   +    G +++
Sbjct: 65  TVKVAGRMMLKRVMGKASFATLQDGSGRIQIYLERGTLGEEAYAAFKQWDI----GDIIA 120

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTL 138
                   N   G++ + A    +LS +   PLP        + +R++ R++DL   D  
Sbjct: 121 IEGPVFKTN--KGELSVHANSARLLSKSLR-PLPDKFHGVADQELRYRQRYVDLIMTDAT 177

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            +    R++ +  +R  M+   F E  TP+L        A+ F+          + L  A
Sbjct: 178 RRTFEARSKAVGGIRQAMLNAGFFEVETPMLHPIPGGAAAKPFVTHHNALDMQMF-LRIA 236

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++ +   +++  E+++
Sbjct: 237 PELYLKRLIVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYAAYADYRWLMDFTEDLI 295

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           R      +    +S     +            +  L+ 
Sbjct: 296 RQAAIAATGSAVLSYQDRELDLSQPFDHLTICEAILKY 333



 Score =  107 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 61/162 (37%), Gaps = 27/162 (16%)

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
           P    +     +  + +E        +   +I+D+P                        
Sbjct: 362 PPLARAGLGALQLALFEE--TAEARLWRPTYIIDYP---------------------VEV 398

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF--- 522
               + +D       +++L   G EIA+G    +  E   + F     +K+  +      
Sbjct: 399 SPLARASDTRDGITERFELFITGREIANGFSELNDPEDQAERFRAQVEAKDAGDEEAMYF 458

Query: 523 -GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                RA + GMPP GG   GIDR+VMLL  + ++R+V LFP
Sbjct: 459 DADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVILFP 500


>gi|217963952|ref|YP_002349630.1| asparaginyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|217333222|gb|ACK39016.1| asparaginyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307571478|emb|CAR84657.1| asparaginyl-tRNA synthetase [Listeria monocytogenes L99]
          Length = 430

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 31/294 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDDIFATAKALTQETSLFV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +             E++   +E++S + + P+     +E+       +R L L
Sbjct: 72  TGTINEDTRSPF-------GYEMAVSGVEVISESHDYPITP---KEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +  H  +  R  II +       E F++   PILT S+PEG  +        + +F  
Sbjct: 122 RSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L   
Sbjct: 180 LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQVQ 238

Query: 254 ENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRYGTDKPD 292
           EN +  + +   +   +                  F RI Y +AI R      D
Sbjct: 239 ENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIERLHELGFD 292



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 40/122 (32%), Gaps = 10/122 (8%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E          A  PF MP+             I    Y       EI  G  R H  E
Sbjct: 312 FEKPVFITHYPKAIKPFYMPEDPENDQVVLCADMIAPEGY------GEIIGGSERIHDLE 365

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +     +  +     +  +       + G  PH G   G++R V  + G ++VRE   F
Sbjct: 366 TLQARMEDFDLD----QEAYSWYLDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPF 421

Query: 563 PM 564
           P 
Sbjct: 422 PR 423


>gi|189347081|ref|YP_001943610.1| lysyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|189341228|gb|ACD90631.1| lysyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 507

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 64/307 (20%), Positives = 119/307 (38%), Gaps = 29/307 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +  +R  G   F  I+D  G  QV    D        + +   +  I G+  
Sbjct: 61  KQVSVAGRIMTIRKMGKASFFHIQDSKGRIQVYLKKDDVGETAYNTFKLLDIGDIVGV-- 118

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----------YPESIRFKY 128
               +       TG+I + A+  E+LS +         +              + +R++ 
Sbjct: 119 ----KGFTFRTKTGEISVHAETFELLSKSLRPIPVAKEKDIDGQKVVYDAFSDKELRYRQ 174

Query: 129 RFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRV 186
           R++DL     + +  +KR+ I+  MR     + ++E  TPIL        AR F      
Sbjct: 175 RYVDLIVNPEVRETFIKRSAIVTFMRQFFTGKGWLEVETPILQPIYGGAAARPFTTHHNA 234

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  A + Y + L+  GFD  F+ A  FR+E       P EF Q+++ +++ + 
Sbjct: 235 LDMQLY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEGIDRFHNP-EFTQVELYVAYKDY 292

Query: 247 DDILNTMENVL---------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           + ++  +E +L                 N  ++   F R+   DAI+ Y       +N  
Sbjct: 293 NWMMELVEELLYRTTLSVNGTHTTSFLGNDISLEPPFRRLTIVDAIKEYCNVDVSGKNET 352

Query: 298 IMHNVTE 304
            + +  +
Sbjct: 353 ELRSAAK 359


>gi|329117573|ref|ZP_08246290.1| lysine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907978|gb|EGE54892.1| lysine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 500

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 65/347 (18%), Positives = 127/347 (36%), Gaps = 19/347 (5%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   S  +L   D+     ++G +   R  G + F  ++D  G  Q+    D+   E 
Sbjct: 50  EKYADKSKEELH--DLNETAIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDAVGEEN 107

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
               +   +    G  +    E +  ++  G++ + A K+  LS +   PLP        
Sbjct: 108 YDIFKKADL----GDFIGVEGEVMRTDM--GELSIKATKLTHLSKSLR-PLPEKFHGLTD 160

Query: 122 ESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               ++ R LDL  +       V R+++I+ +R  +   +F+E  TP+L   +   A   
Sbjct: 161 IETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGMDFLEVETPVLHNEAGGAAARP 220

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            V     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++ 
Sbjct: 221 FVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVY 279

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ +  DI+N  E +++           +      I  +   +R             + 
Sbjct: 280 QAYADYQDIMNLTEGIIQHAANAVKGDGPIDYQGNEILINQPFKRVHMVDA-------IK 332

Query: 301 NVTEHFVHSEFRVFSK-ILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
            VT      E  +     L+      +       G    AF +   E
Sbjct: 333 EVTGIDFWPEMSIEDALALAKEKHVPLEKHFTSVGHIINAFFEEFVE 379



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      F  P       K N        +++L     E A+   
Sbjct: 369 IINAFFEEFVEET--LIQPTFVFGHPVEVSPLAKKNPEDGRFTDRFELFIMTKEYANAFT 426

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 427 ELNDPIDQLSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTN 486

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 487 TTTIRDVLLFPTMK 500


>gi|323698049|ref|ZP_08109961.1| lysyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323457981|gb|EGB13846.1| lysyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 502

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 59/302 (19%), Positives = 123/302 (40%), Gaps = 24/302 (7%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G+L    +    +   ++G V   R  G + F  ++D  G  QV A  D    +  +  +
Sbjct: 51  GELDEEALEGTDAQFTIAGRVVSYRSFGKVTFFHMQDRSGNIQVYAARDELGPDEYQLFK 110

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +    G ++  +         TG++ +  +  ++++ +   PLP           R+
Sbjct: 111 KTDI----GDIVGVTGSLFRTK--TGELTVKTRHFQLVTKS-MRPLPEKYHGLKDVETRY 163

Query: 127 KYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL       +    RT II  +R  +  + F+E  TP++ A      A+ F    
Sbjct: 164 RQRYVDLIVTPRTKEIFQARTAIIRELRNILDEKGFMEVETPMMQAIPGGATAKPFETHH 223

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  AP+ Y + L+  GF+R ++I   FR+E   +   P EF  L+   ++ 
Sbjct: 224 NALDMKLY-MRIAPELYLKRLLVGGFERVYEINRNFRNEGMDTQHNP-EFTMLEFYWAYA 281

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN----------FLRICYDDAIRRYGTDKPDLR 294
           +  D+++  E +   + E+ +    V             + R+ + +++ + G   PD+ 
Sbjct: 282 DFMDLMDLTEEIFSRIAEKVTGSTVVPYQGEMIDLTVGAWTRMPFHESLEKIGGVSPDVY 341

Query: 295 NP 296
             
Sbjct: 342 MD 343



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 56/147 (38%), Gaps = 16/147 (10%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
            ++LG +    F+               E ++   H  +  P       + N+       
Sbjct: 361 GEKLGKLQAKLFDLL------------VEPRLIQPHFIYHYPTDISPLSRRNEDNPDITD 408

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPH 536
           +++L   G E+A+     +        F      KE  +           RA + GMPP 
Sbjct: 409 RFELFMTGRELANAFSELNDPVDQRGRFEIQVQEKEAGDEEAHFMDEDYVRALEYGMPPA 468

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   GIDR+VMLL  + ++REV LFP
Sbjct: 469 AGQGIGIDRLVMLLTDSASIREVILFP 495


>gi|255522650|ref|ZP_05389887.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
          Length = 429

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 66/359 (18%), Positives = 137/359 (38%), Gaps = 28/359 (7%)

Query: 28  HRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINA 87
              R  G + F  I+D +   Q+    D+   +     +   +  I G+      +    
Sbjct: 1   MTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKLADLGDIIGI------KGTIF 54

Query: 88  NIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL-HKNIVKRT 146
              TG++ + A +  +LS +   PLP           R++ R+LDL  +       V R+
Sbjct: 55  RTNTGELSVKATEFTLLSKSLR-PLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRS 113

Query: 147 RIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
           +I+   R  M  + F+E  TP+L T +    A+ F+          Y L  A + + + L
Sbjct: 114 KILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELY-LRIALELHLKRL 172

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           +  G D+ ++I   FR+E   +   P EF  L+   ++ + +D+++ +E ++  V ++ +
Sbjct: 173 IVGGMDKVYEIGRVFRNEGTSTRHNP-EFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVN 231

Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                         +     Y  D       I M +  + +V  +F   +         +
Sbjct: 232 G-----------TTEITYGEYNVDLTPNWRRIHMADAVKEYVGVDFWNVTSDEEARELAK 280

Query: 326 VWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
              +P      +  +   +NE+  +  +  L    +     G+   + P+AK     + 
Sbjct: 281 KHNVPV---TEHMTYGHILNEFFETYVEEKLIQPTFVY---GHPVEISPLAKKNKEDDR 333



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + K  +       +++L   G E A+     +  
Sbjct: 299 FFETYVEEKLIQPTFVYGHPVEISPLAKKNKEDDRF-TDRFELFIVGREHANAFSELNDP 357

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +   G       A + G+PP GG+  GIDR+VMLL  A ++R
Sbjct: 358 IDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIR 417

Query: 558 EVSLFPMSQNF 568
           ++ LFP  ++ 
Sbjct: 418 DILLFPTMKHR 428


>gi|258511605|ref|YP_003185039.1| asparaginyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478331|gb|ACV58650.1| asparaginyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 431

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 74/309 (23%), Positives = 121/309 (39%), Gaps = 31/309 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWV 70
              VG  VRL GW++  R  G I FL +RD  G+ Q V    N     F  + ++  E  
Sbjct: 11  ADHVGQDVRLRGWLYNKRSSGKIHFLQVRDGTGLVQCVVVKSNVSDETFAASDALTQESS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L ++G V   +          G  E+  + IE + +A E P      +E+       +R 
Sbjct: 71  LVVEGTVRQDAR-------APGGYEIDVRHIEPVQLAHEYP---IALKEHGIDFLLDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L +R       +  R  I  +++  +    F     PILT +S E   +       +  +
Sbjct: 121 LWIRVPRQRAILRIRAEIECAIQAFLDNNGFTRVDAPILTPASCEDTTELFETRYFDDTA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A    + +   PCFR E  ++ R   EF+ ++ EM+FVE ++ L
Sbjct: 181 Y--LTQSGQLYMEAA-AMALGKVYCFGPCFRAEKSKTRRHLIEFWMVEPEMAFVEHEENL 237

Query: 251 NTMENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRYGTDKPDLRN 295
              E ++  V +   +                      F R+ YDDAIR       D+  
Sbjct: 238 RVQEALVEHVVQSVIDRCAPELELLGRDIARLERVRAPFARMSYDDAIRWLRDHGFDIAW 297

Query: 296 PIIMHNVTE 304
                +  E
Sbjct: 298 GDDFGSPHE 306



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 47/129 (36%), Gaps = 19/129 (14%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGM--ESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           D P +      ++       F M       E +   D+L+ + +         EI  G  
Sbjct: 314 DTPVF-----IERYPTKLKAFYMQPDPDRPEVVLCADMLAPEGYG--------EIIGGSQ 360

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  E++   F    +     E  +G      + G  PH G   G++R +  + G  +V
Sbjct: 361 RIHDYELLKARFEEHRLP----EETYGWYLDLRRYGSVPHSGFGLGLERTIAWICGLDHV 416

Query: 557 REVSLFPMS 565
           RE  LFP  
Sbjct: 417 REAILFPRM 425


>gi|218671075|ref|ZP_03520746.1| aspartyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 193

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 124/195 (63%), Positives = 155/195 (79%), Gaps = 2/195 (1%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           M +GFDRYFQIAPCFRDEDPR+DRLPGEFYQLD+EMSFV Q+D+ NTM  ++  +FEEF+
Sbjct: 1   MVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLEMSFVTQEDVWNTMGPLMTQIFEEFA 60

Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
            G  V+  + RI YD+AIR+YGTDKPDLRNPI+M  VTEHF  S F+VF+ +++ NP  +
Sbjct: 61  EGKPVTKEWPRIPYDEAIRKYGTDKPDLRNPIVMEAVTEHFAGSGFKVFAGMIASNPKVQ 120

Query: 326 VWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE 385
           +WAIPAK GG +RAFCDRMN WA+SQGQPGL YIFWR  E+  + G GP+AK++    TE
Sbjct: 121 IWAIPAKTGG-SRAFCDRMNAWAQSQGQPGLGYIFWR-SENDKLEGAGPLAKNIGEERTE 178

Query: 386 AIRVRLDMQDGDSCF 400
           AIR +L + DGD+CF
Sbjct: 179 AIRTQLGLGDGDACF 193


>gi|332703876|ref|ZP_08423964.1| Lysyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332554025|gb|EGJ51069.1| Lysyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 523

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 112/262 (42%), Gaps = 11/262 (4%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
               ++G +  +R  G   F  ++D  G  QV A+ D    +  +  +   +  + G+  
Sbjct: 85  REFTVAGRIVAMRSFGKAAFFHLQDPTGRLQVFASRDDLGEDAYRVFKKLDMGDLVGV-- 142

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDT 137
                    +  TG++ L + +I +L+ +   PLP          +R++ R++DL     
Sbjct: 143 ----RGTLFHTKTGELTLKSSQITLLTKSLR-PLPDKWHGLKDVEMRYRQRYVDLIVTPR 197

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
             +  +KRT+++  MR  +  E F+E  TP++        A+ F           Y +  
Sbjct: 198 TREIFLKRTQVVREMRNFLDREGFMEVETPMMQPIPGGATAKPFETHHNALDMKLY-MRI 256

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF++ +++   FR+E   +   P EF   +   ++   +D+++  E +
Sbjct: 257 APELYLKRLLVGGFEKVYEVNRNFRNEGISTQHNP-EFTMCEFYWAYATFEDLMDLTERM 315

Query: 257 LRGVFEEFSNGNTVSNNFLRIC 278
              + ++ +    V     +I 
Sbjct: 316 FAHIAQQVTGNTVVEYQGQQID 337



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 8/128 (6%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           F  +     E K+   H  +  P       + ND       +++L  +G E+A+     +
Sbjct: 394 FDMFV----EPKLVQPHFIYHYPTDISPLSRRNDQDPTITDRFELFMSGREMANAFSELN 449

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                   F      KE  +           RA + GMPP  G   GIDR+VMLL  + +
Sbjct: 450 DPVDQRLRFMEQVQEKEAGDEEAHYMDEDYVRALEYGMPPAAGQGIGIDRLVMLLTDSPS 509

Query: 556 VREVSLFP 563
           +REV LFP
Sbjct: 510 IREVILFP 517


>gi|332359479|gb|EGJ37299.1| lysine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 496

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 56/288 (19%), Positives = 117/288 (40%), Gaps = 11/288 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L   ++     ++G +   R  G + F  I+D  G  Q+    D+   E 
Sbjct: 46  EKYNDKDKEELN--ELNETAIIAGRLMTKRGKGKVGFAHIQDREGQIQIYVRKDAVGEEN 103

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +  +   +    G  +    E +  ++  G++ + A  +  LS A   PLP        
Sbjct: 104 YEIFKKADL----GDFLGIEGEIMRTDM--GELSIKATHLTHLSKALR-PLPEKFHGLTD 156

Query: 122 ESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               ++ R+LDL  +       V R++II+ +R  +  + F+E  TP+L   +   A   
Sbjct: 157 VETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAARP 216

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +     Q     L  A + + + L+  G +R ++I   FR+E   +   P EF  +++ 
Sbjct: 217 FITHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVY 275

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
            ++ +  DI++  E +++      +    V+     I  ++  +R   
Sbjct: 276 QAYADFQDIMDLTEGIIQHAAISVNGDGPVNYQGTEIKINEPFKRVHM 323



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           +++  F E+ EE   +      +  P       K N        +++L     E A+   
Sbjct: 365 VINAFFEEFVEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFT 422

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+VMLL  
Sbjct: 423 ELNDPIDQLSRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTD 482

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 483 VTTIRDVLLFPTMK 496


>gi|121595553|ref|YP_987449.1| lysyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|120607633|gb|ABM43373.1| lysyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 515

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/309 (19%), Positives = 127/309 (41%), Gaps = 25/309 (8%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHY-----GITQVVANPDSACFEIAKSVRSEWVLCID 74
            V ++G +   R  G   F  ++D       G  Q+    D+   E     +   +  I 
Sbjct: 71  TVSVAGRMMLKRVMGKASFATLQDGSLGDTGGRIQLYVTRDAIGEEAYSDFKRWDLGDIL 130

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G      AE       TG++ +   ++ +L+ +   P+P        + ++++ R++DL 
Sbjct: 131 G------AEGTLMKTKTGELSVKVSRLRLLTKSLR-PMPDKFHGVADQEVKYRQRYVDLM 183

Query: 135 RDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            D    +  V R++ + S+R  M+   F+E  TP+L        A+ F+      +   +
Sbjct: 184 TDEAARRRFVARSKAVGSIRSFMMEHGFLEVETPMLHPIPGGANAKPFVTHHNALEQEMF 243

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D+++ 
Sbjct: 244 -LRIAPELYLKRLIVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYRDLMDF 301

Query: 253 MENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            E ++R    + +    ++           F R+   +AI ++      + +   + +  
Sbjct: 302 TEALVRDAALKATGTLQLTYGGRAVDLAQPFQRLTIREAIYQHTEAGAHVDDAAWLISAL 361

Query: 304 EHFVHSEFR 312
           +    +E +
Sbjct: 362 KKLGMTEEK 370



 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           ++E   E+K        F M      S   + NDL      +++L   G E  +G    +
Sbjct: 385 YFEEEVEDKLWQPT---FIMEHPTEISPLARANDLRPEVTERFELYITGREFGNGFSELN 441

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            +E     F     +K+  ++          RA + GMPP GG   GIDR++MLL  + +
Sbjct: 442 DAEDQAARFHAQVAAKDAGDDEAMFFDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSPS 501

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 502 IRDVILFP 509


>gi|257076701|ref|ZP_05571062.1| aspartyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 427

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 148/365 (40%), Gaps = 25/365 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
           RT    D+   D GS V + GWV   R    ++F+ +RD+ G  QV A  DS   ++   
Sbjct: 2   RT-YIADIKTLDDGSDVTIKGWVQETRKIKNLMFIIMRDNTGSIQVTAKKDSMKNYDQLY 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPE 122
            +  E V+ + G +  +S       I    +E+   +IEILS+A+      V        
Sbjct: 61  DITRESVISVYGTLNKKS-------ISKSGMEIQGIEIEILSIADTPLPLGVIDRVSADF 113

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R   RFLDLR+          ++++  +R  M  ENFIE  TP + A++ EG  D   
Sbjct: 114 DTRLNNRFLDLRKPEHLLIFQFESQLLFGIREFMNKENFIEVHTPKIVAAATEGGADLFR 173

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                + +F  L Q+PQ YK++L+ASGFD+ F++ P FR E   + R   EF  +DME +
Sbjct: 174 VEYFEKNAF--LNQSPQLYKEILIASGFDKVFEVGPAFRAEKENTVRHLNEFTSIDMEAA 231

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTV------------SNNFLRICYDDAIRRYGTDK 290
           F++    +  +EN +        +                   F RI Y+D I       
Sbjct: 232 FIDDKKAMEYLENAISYAVNRNIDLMHTKLEEYGYHLEKIETPFPRISYEDGIEYLNDHG 291

Query: 291 PDLRNPIIMH-NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
             L           +         +      +     +  P       ++F  ++N+   
Sbjct: 292 LKLNFGDDFSPEANKILAEKFNGFYFITGWPSDMRPFYTHPDTNPALTKSFDLQLNDIEV 351

Query: 350 SQGQP 354
           + G  
Sbjct: 352 TSGAQ 356



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D        +DL  N  E+ SG  R H  +++   F   G++K      F    +AF+ 
Sbjct: 332 PDTNPALTKSFDLQLNDIEVTSGAQRIHNYKMLEDNFMKKGLNKND----FEFYEKAFKF 387

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GMPPH G   G++R+VM LL   NVRE +LFP  +     
Sbjct: 388 GMPPHAGWGLGLERLVMNLLHLNNVRESTLFPRDRTRLSP 427


>gi|310822815|ref|YP_003955173.1| lysyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309395887|gb|ADO73346.1| Lysyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 516

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 70/305 (22%), Positives = 119/305 (39%), Gaps = 36/305 (11%)

Query: 4   YR-THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           YR  H   D+                    ++G +  +R  G   F+ +RD  G  QV  
Sbjct: 46  YRAEHLAADIHAKHASQSPEELEKDAPTYTVAGRIVAMRTFGKAAFIKLRDRSGEIQVHM 105

Query: 53  NPDSAC--FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
             D+    +E  K       L   G V             TG++ LSA K   L+ +   
Sbjct: 106 KKDALGDSYEAFKLCDLGDFLGATGPV---------FRTKTGELSLSATKFTPLTKSLR- 155

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL 169
           PLP          IR++ R+LDL  +   K    KR +++  +R  + + ++IE  TP++
Sbjct: 156 PLPEKWHGLTDVEIRYRQRYLDLVSNPEVKQTFLKRNKLVRFIREFLDSRDYIEVETPMM 215

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
               S   AR F           Y +  AP+ Y + L+  G +R ++I   FR+E   + 
Sbjct: 216 HPLVSGAAARPFKTHHNALDIELY-MRIAPELYLKRLVVGGIERVYEINRNFRNEGISTR 274

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICY 279
             P EF  L+   ++   +D+++  E ++    +  +    V            + RI  
Sbjct: 275 HNP-EFTMLEFYQAYATYEDLMDLTEQMISEAAQAVTGATKVPYQGHELDFGKGWKRIPM 333

Query: 280 DDAIR 284
            +AIR
Sbjct: 334 TEAIR 338



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 61/328 (18%), Positives = 105/328 (32%), Gaps = 26/328 (7%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++  D +     ++  +          +  F        I  Y    P+L    ++   
Sbjct: 201 FLDSRDYIEVETPMMHPLV-----SGAAARPFKTHHNALDIELYMRIAPELYLKRLVVGG 255

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            E          ++ +S     E   +              + E   S+    +     +
Sbjct: 256 IERVYEINRNFRNEGISTRHNPEFTMLEFYQAYATYEDLMDLTEQMISEAAQAVTGAT-K 314

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           +   G+    G   K + +  TEAIR  +     D       DP K         +  A+
Sbjct: 315 VPYQGHELDFGKGWKRIPM--TEAIREAVGGALSDK---DMADPDKLRHELLKTSHGEAE 369

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA---HNPFTMPQGGMESLKGNDLLSIKA 479
              I   N  E         +E + E+K I      H P ++        + ND      
Sbjct: 370 RRAIETMNQGELVGA----LFEAHVEQKLIHPTFITHFPTSVSPLA----RRNDQNPEIT 421

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAF----SNVGISKEVVENRFGGLYRAFQCGMPP 535
            +++L   G EIA+     +        F          ++   +      RA + GMPP
Sbjct: 422 DRFELFVAGREIANAFSELNDPLDQKGRFLGQLEAKQRGQQETMDYDEDYIRALEHGMPP 481

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             G   GIDR+ ML   A ++R+V LFP
Sbjct: 482 TAGEGIGIDRLTMLFTDAPSIRDVILFP 509


>gi|50913862|ref|YP_059834.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|50902936|gb|AAT86651.1| Lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 501

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 61/332 (18%), Positives = 123/332 (37%), Gaps = 26/332 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT +  +L             ++     ++G +   R  G + F  ++D  G  Q+    
Sbjct: 41  RTANSAELKEKYADKTKEELHELNETAIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRK 100

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   +  +  +   +    G  +    E +  ++  G++ + A K+  LS +   PLP 
Sbjct: 101 DSVSEDNYEIFKKADL----GDFIGVEGEVMRTDM--GELSIKATKLTHLSKSLR-PLPE 153

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      ++ R LDL  +       V R+++I+ +R  +   +F+E  TP+L   +
Sbjct: 154 KFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETPVLHNEA 213

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    V     Q     L  A + + + L+  G +R ++I   FR+E   +   P E
Sbjct: 214 GGAAARPFVTHHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-E 272

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  DI+N  E +++   +       +      I  ++  +R        
Sbjct: 273 FTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFKRVHMVDA-- 330

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                +  VT      E  V   I        
Sbjct: 331 -----IKEVTGVDFWPEMTVEEAIALAKEKQV 357



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ EE   +      F  P       K N   +    +++L     E A+   
Sbjct: 369 IINAFFEEFVEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFT 426

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ MLL  
Sbjct: 427 ELNDPIDQLSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTN 486

Query: 553 AKNVREVSLFPMSQ 566
              +R+V LFP  +
Sbjct: 487 TTTIRDVLLFPTMK 500


>gi|239908486|ref|YP_002955228.1| lysyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239798353|dbj|BAH77342.1| lysyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 510

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 64/344 (18%), Positives = 126/344 (36%), Gaps = 23/344 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +  ++++G   RL+G +  +R  G + F  I+D  G  QV A  ++   E     +   +
Sbjct: 61  EEALAELGRTFRLAGRIVSLRSFGKVAFFTIQDASGRIQVFAERETLGQEAYTVFKKFDI 120

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             I G+              TG++ L A  + +++ +   PLP           R++ R+
Sbjct: 121 GDIVGV------TGRLFRTKTGELTLHADTLSLVTKS-MRPLPEKYHGLKDVETRYRQRY 173

Query: 131 LDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           +DL       +    RT II  +R  + +  F+E  TP++ A      AR F+       
Sbjct: 174 VDLIVTPRSVEIFKARTTIIRELRAFLDSSGFMEVETPMMQAIPGGATARPFVTHHNALD 233

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  AP+ Y + L+  GF++ +++   FR+E   +   P EF   +   ++    D
Sbjct: 234 MGLY-MRIAPELYLKRLLVGGFEKVYEVGRNFRNEGVSTRHNP-EFTMCEFYWAYARYTD 291

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           +++  E +   + +  +    VS     I       R           +  H   E    
Sbjct: 292 LMDLTERLFARLAKAVTGSEAVSYQGQEINLAPGWAR-----------LSFHESIEKVGG 340

Query: 309 SEFRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQ 351
            +  +           E       KG    +      + +   +
Sbjct: 341 IDPEIIRDYDKAKSLVEKSGEKVLKGDKLGKVQAKLFDIFVEPK 384



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 51/333 (15%), Positives = 102/333 (30%), Gaps = 27/333 (8%)

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
             +    +F++    +     +++ +      G   +  F+       +  Y    P+L 
Sbjct: 191 TIIRELRAFLDSSGFMEVETPMMQAI-----PGGATARPFVTHHNALDMGLYMRIAPELY 245

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354
              ++    E          ++ +S     E                  + E   ++   
Sbjct: 246 LKRLLVGGFEKVYEVGRNFRNEGVSTRHNPEFTMCEFYWAYARYTDLMDLTERLFARLAK 305

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
            +      +   G    + P    L+   +      +D +                  + 
Sbjct: 306 AVTG-SEAVSYQGQEINLAPGWARLSFHESIEKVGGIDPE----IIRDYDKAKSLVEKSG 360

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           +       +LG +    F+  ++           E K+   H  +  P       + N  
Sbjct: 361 EKVLK-GDKLGKVQAKLFD-IFV-----------EPKLIQPHFIYHYPTEISPLSRRNTE 407

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++L   G E+A+     +      Q F +    KE  ++          RA +
Sbjct: 408 NPEITDRFELFIAGREMANAFSELNDPVDQRQRFEDQVREKEAGDDEAHRMDEDYVRALE 467

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP  G   GIDR+VMLL    ++REV LFP
Sbjct: 468 YGMPPAAGEGIGIDRLVMLLTDQASIREVILFP 500


>gi|222111774|ref|YP_002554038.1| lysyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|221731218|gb|ACM34038.1| lysyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 515

 Score =  194 bits (494), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/309 (19%), Positives = 127/309 (41%), Gaps = 25/309 (8%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHY-----GITQVVANPDSACFEIAKSVRSEWVLCID 74
            V ++G +   R  G   F  ++D       G  Q+    D+   E     +   +  I 
Sbjct: 71  TVSVAGRMMLKRVMGKASFATLQDGSLGDTGGRIQLYVTRDAIGEEAYSDFKRWDLGDIL 130

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G      AE       TG++ +   ++ +L+ +   P+P        + ++++ R++DL 
Sbjct: 131 G------AEGTLMKTKTGELSVKVSRLRLLTKSLR-PMPDKFHGVADQEVKYRQRYVDLM 183

Query: 135 RDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            D    +  V R++ + S+R  M+   F+E  TP+L        A+ F+      +   +
Sbjct: 184 TDEAARRRFVARSKAVGSIRSFMMEHGFLEVETPMLHPIPGGANAKPFVTHHNALEQEMF 243

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D+++ 
Sbjct: 244 -LRIAPELYLKRLIVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYRDLMDF 301

Query: 253 MENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            E ++R    + +    ++           F R+   +AI ++      + +   + +  
Sbjct: 302 TEALVRDAALKATGTLQLTYGGRAVDLAQPFQRLTIREAIYQHTEAGAHVDDAAWLISAL 361

Query: 304 EHFVHSEFR 312
           +    +E +
Sbjct: 362 KKLGMTEEK 370



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           ++E   E+K        F M      S   + NDL      +++L   G E  +G    +
Sbjct: 385 YFEEEVEDKLWQPT---FIMEHPTEISPLARANDLRPEVTERFELYITGREFGNGFSELN 441

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            +E     F     +K+  ++          RA + GMPP GG   GIDR++MLL  + +
Sbjct: 442 DAEDQAARFHAQVAAKDAGDDEAMFFDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSPS 501

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 502 IRDVILFP 509


>gi|182413900|ref|YP_001818966.1| lysyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177841114|gb|ACB75366.1| lysyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 500

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 65/308 (21%), Positives = 123/308 (39%), Gaps = 22/308 (7%)

Query: 6   THSCGD-----LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           TH   D     +   D    V ++G +   R  GG  F+ I+D  G  Q+    D    E
Sbjct: 38  THFSADAKALYVDGQDYAVPVTVAGRLVTFRVQGGSSFVKIQDQQGQIQLYFRKDVLGEE 97

Query: 61  IA----KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
                 K++    ++ + G +             TG+I +      ++S A   PLP   
Sbjct: 98  RYGFFKKALDLGDIIGVTGTL---------FKTKTGEITVRVDSFTLVSKALR-PLPEKF 147

Query: 117 EREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                    ++ R+LD+  +      ++ R+RI++ +R  +   +FIE  TP+L A++  
Sbjct: 148 HGLSDPEQVYRQRYLDVIMNQESRARLMLRSRIVSHVRRFLEGRSFIEVETPVLEATAGG 207

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            A    V         + L  A +   + ++  GFDR F+I   FR+E   S R   EF 
Sbjct: 208 AAARPFVTHHNALNVDFFLRIATELRLKRMLVGGFDRVFEIGRIFRNEGV-SRRHNPEFT 266

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            L++  ++ +   ++  + ++L  +  +       S           I  +G +  ++R 
Sbjct: 267 MLEVYQAYSDYRGMMTLIRDLLTSLVRDIVKPADGSLKIKHSASGQEID-FGGEWREVRY 325

Query: 296 PIIMHNVT 303
             ++  VT
Sbjct: 326 KDLIKEVT 333



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 82/224 (36%), Gaps = 23/224 (10%)

Query: 342 DRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
           D +    R   +P    +  +   SG     G              +  +    GD+ +F
Sbjct: 286 DLLTSLVRDIVKPADGSLKIKHSASGQEIDFG------GEWREVRYKDLIKEVTGDAEWF 339

Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE--KKIDFAHNPF 459
                 K            A+ +G+     +E   I +  F +  E    +     H P 
Sbjct: 340 SRSKAEKIAK---------AEAMGLQIHPGWEEFEITNEIFSKKIEPTLIQPTFVTHLPK 390

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
            +    +  L   D   +    ++L   G E+A      +  +V  + F      ++   
Sbjct: 391 ELCP--LAKLNAEDPSVL--DVFELTIGGMEVAPAYSEQNDPDVQREMFEKQAGEEKQNI 446

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           ++      A + GMPP GG+  GIDR+ +LL GA+++R+V LFP
Sbjct: 447 DQ--DFLLALEHGMPPAGGMGVGIDRLCILLTGAESIRDVILFP 488


>gi|302185553|ref|ZP_07262226.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 416

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 74/366 (20%), Positives = 132/366 (36%), Gaps = 59/366 (16%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTSVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +   +   + R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDLEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D ++  E + R + +       V               YG     
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVP--------------YGDKVFH 314

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P +              VF  IL  NP      +            D+    A+  G
Sbjct: 315 FGEPFVR-----------LSVFDSILKYNPELTAADL---------QDIDKARAIAKKAG 354

Query: 353 QPGLAY 358
              L +
Sbjct: 355 AKVLGF 360


>gi|161528574|ref|YP_001582400.1| aspartyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339875|gb|ABX12962.1| aspartyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 428

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 75/310 (24%), Positives = 141/310 (45%), Gaps = 25/310 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           +TH   +L    +G  V L GW+  +R  G + F+ +RD  GI+QV+   +    +    
Sbjct: 5   KTHDISELTSELIGKQVVLGGWIEDLRKLGKMSFITLRDVSGISQVIVKGELN--DNLGE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123
           +  + V+ + G+V    A            E+ A++IE+L  A   LP+   G  E    
Sbjct: 63  INRQSVVSVKGIVQETKARDFA-------FEIKAEEIEVLGKAIHPLPVDPIGRVESNID 115

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LD+R          R  ++ S+R  ++ + FIE +TP +  S+ EG  +    
Sbjct: 116 TRLNHRALDMRNQKTASIFKLRHYVLQSLRKTLVGKKFIEITTPKIIGSASEGGANLFSL 175

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++ A  Q+PQ YK+  M  G +R F+I+  +R E+  + R   EF  +D+E +F
Sbjct: 176 EYFGKKAYLA--QSPQLYKEQ-MTIGLERVFEISNFYRAENSHTGRHLSEFTSIDIEAAF 232

Query: 244 VEQDDILNTMENVLRGVFE----------EFSNGNT--VSNNFLRICYDDAIRRYGTDKP 291
           ++ +D+++ +E+++  V++          E          + F RI Y+  I    +   
Sbjct: 233 MDYNDVMDVLESLVMDVYKFTSENCKKEQEIIGHTIEVPKSPFERITYNQCIEELKSAGE 292

Query: 292 DLRNPIIMHN 301
            +     + +
Sbjct: 293 KVEFGDDLLD 302



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 72/192 (37%), Gaps = 30/192 (15%)

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
            I   ++   R+           AG+ ++F     D+   I      I  N   F ++ D
Sbjct: 267 TIEVPKSPFERITYNQCIEELKSAGEKVEFGDDLLDSHLRI------IGNNHPGFFFLTD 320

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           +P                PF + +      K  D     +  +DL     E++SGG R H
Sbjct: 321 WPM------------KLKPFYIRE------KDEDPE--LSRSFDLQYGYLELSSGGTRLH 360

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             E +        +       +F    +AF  GMPPH G   G+DR++  L+G  NVREV
Sbjct: 361 NPERLKNRLREQDLDP----AQFTDHLKAFDWGMPPHSGWGMGLDRLMTTLIGIDNVREV 416

Query: 560 SLFPMSQNFCDL 571
            L+P   +    
Sbjct: 417 VLYPRDPDRLSP 428


>gi|227888862|ref|ZP_04006667.1| lysyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|268318842|ref|YP_003292498.1| lysyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
 gi|227850699|gb|EEJ60785.1| lysyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|262397217|emb|CAX66231.1| lysyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
          Length = 514

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 81/440 (18%), Positives = 157/440 (35%), Gaps = 37/440 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L      +  +++G +   R  G + F D+ D  G  Q+    D    + 
Sbjct: 44  EKYSNEDKDELNADMPMT--KIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDN 101

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  +   +    G  +    E +     TG++ + A  I  LS A   PLP   +    
Sbjct: 102 YKIFKKSDI----GDFLGIDGEVM--KTDTGELTIRATHITFLSKALR-PLPNKWDGLKD 154

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
               ++ R+LDL  +         RT+II ++R  +   +F+E  TP+L        AR 
Sbjct: 155 VEQIYRQRYLDLITNHDSYMRFVHRTQIIQAIRDYLNNRDFLEVETPVLHNIPGGAEARP 214

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  A +   + L+  G +R ++I   FR+E   +   P EF +L+ 
Sbjct: 215 FITHHNALDIDLY-MRIALELPLKRLIVGGMERVYEIGRVFRNEGLDTKHNP-EFTELET 272

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  D+++  E ++R   +                 D  I   GTD  DL  P   
Sbjct: 273 YAAYWDFHDVMDEAEGIIRAAAKVV-------------SPDGKITYQGTD-IDLGKPFRR 318

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++ +         F K +++    +V                 +N +    G+  +   
Sbjct: 319 VHMVDLIKEKTGVDFWKPMTIEEARKVADEHNVHYESYWKVGHIINAFFEEFGEGSIVQP 378

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVR---LDMQDGDSCFFIA---GDPLKFCSFA 413
            +     G+   + P+AK          R     +  + G++   +        +F    
Sbjct: 379 TFVY---GHPVEVSPLAKKNADDPRFTDRFEIFIMGAEYGNAFSELNDPDDQRHRFEDQM 435

Query: 414 ADARNHIAQELGIINCNCFE 433
           A+ R     E  +I+ +   
Sbjct: 436 AE-REAGNDEADMIDEDYLR 454



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 6/153 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A E  +   + ++   I++  F E+   E  I      +  P       K N     
Sbjct: 343 RKVADEHNVHYESYWKVGHIINAFFEEF--GEGSIVQPTFVYGHPVEVSPLAKKNADDPR 400

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGM 533
              ++++   G E  +     +  +     F +    +E   +          RA + GM
Sbjct: 401 FTDRFEIFIMGAEYGNAFSELNDPDDQRHRFEDQMAEREAGNDEADMIDEDYLRAMEFGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 461 PPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 493


>gi|51245183|ref|YP_065067.1| asparaginyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|59798522|sp|Q6ANL4|SYN_DESPS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|50876220|emb|CAG36060.1| probable asparaginyl-tRNA synthetase [Desulfotalea psychrophila
           LSv54]
          Length = 449

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 61/335 (18%), Positives = 126/335 (37%), Gaps = 38/335 (11%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDG 75
             V ++GW+   R  G   FL++ D   +  +    D +     E  K + +   + ++G
Sbjct: 16  QVVTVAGWIRTRRDTGDFSFLEVNDGSTLINMQVIADKSLGNYEEEVKKLSTGCSVMVEG 75

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           ++    A+  +       +E+ A  + ++  A+    P+  +R   E +R +   L  R 
Sbjct: 76  VLKESPAKGQS-------VEVHASSVTVVGWADPETYPLQKKRHSLEFLR-EISHLRPRT 127

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-RVNQGSFYAL 194
           + +      R+R+  ++      + F +  TPI+T S  EGA +    +     G F+  
Sbjct: 128 NAISAVARVRSRLSYAVHNFFQEKGFTQVHTPIITTSDCEGAGEMFQVAATGKDGHFFGA 187

Query: 195 P---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           P       Q +  + A+     +   P FR E+  + R   EF+ ++ EM+F +    + 
Sbjct: 188 PAGLTVSGQLQAEVYATALGDVYTFGPTFRAENSNTSRHLAEFWMIEPEMAFCDLQGDME 247

Query: 252 TMENVLRGVFEEFSNGNTVSNN---------------------FLRICYDDAIRRYGTDK 290
             E +L+ V  +         N                     F R+ Y +A+ +     
Sbjct: 248 VAEEMLKYVLADVLEHCVTDMNLFDKFISKGIIERLQSVLAHDFARVTYTEAVDQLLASG 307

Query: 291 PDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
                 +   +   +EH  +   +V+ + L V   
Sbjct: 308 QKFDFAVKWGIDLQSEHERYLTEQVYKRPLIVTDY 342



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 43/134 (32%), Gaps = 24/134 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
               + D+P             A  PF M                 A    LV    E+ 
Sbjct: 335 RPLIVTDYP------------AAIKPFYMRMNED--------GKTVAAMDILVPGIGELV 374

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +++ +     G+        +G      + G  PH G   G +R+V  + G
Sbjct: 375 GGSQREERYDLLAERMEAAGLDL----EEYGWYLDLRKYGTVPHAGFGLGFERLVQFVTG 430

Query: 553 AKNVREVSLFPMSQ 566
             N+REV  FP + 
Sbjct: 431 MANIREVIPFPRTP 444


>gi|51892720|ref|YP_075411.1| asparaginyl-tRNA synthetase [Symbiobacterium thermophilum IAM
           14863]
 gi|59798516|sp|Q67P26|SYN_SYMTH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|51856409|dbj|BAD40567.1| asparaginyl-tRNA synthetase [Symbiobacterium thermophilum IAM
           14863]
          Length = 437

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 71/308 (23%), Positives = 113/308 (36%), Gaps = 32/308 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWV 70
               G  V L GWV   R  G I F+  RD  G+ Q V    +     FE  K +  E  
Sbjct: 10  PQYEGQTVELRGWVQNYRSSGKIQFIIFRDGTGVCQAVLFIKDVPPEVFEAGKRLTQESS 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I G V              G  E+  Q +EI+ +AEE P+    ++E+       +R 
Sbjct: 70  IIIRGSVRKDDR-------APGGYEIGVQDLEIVQIAEEYPIT---KKEHGTEFLMDHRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L +R +     +  R  I  ++   +    F+   +PIL  ++ EG       + VN   
Sbjct: 120 LWIRSNRQVAILRIRNEITMAIHQFLQENGFVLTESPILMGTAAEGGATLFETTYVNDEP 179

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q+ Q + +   A    R +   P FR E  ++ R   EF+ ++ E ++   +D +
Sbjct: 180 AY-LSQSGQLHVE-ATAMALGRVYTFGPTFRAEKSKTRRHLIEFWMVEPEAAYFTHEDNM 237

Query: 251 NTMENVLRGVFEEFSNG---------------NTVSNNFLRICYDDAIRRYG--TDKPDL 293
              E ++  V                        V   F RI Y +A+          D 
Sbjct: 238 RLQEEMVTYVVRRVLERRSKELQLIGRDTTLLEKVEPPFPRITYTEAVEMLKKLHKPGDE 297

Query: 294 RNPIIMHN 301
             PI    
Sbjct: 298 WEPIEWGE 305



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 52/147 (35%), Gaps = 24/147 (16%)

Query: 430 NCFEFC-WIMDF--P-------FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +E   W  DF  P        +E     +K       F M           +   +  
Sbjct: 296 DEWEPIEWGEDFGAPHETVLTQQFEKPVFVEKFPVKVKAFYMQPD------PENPDVVLG 349

Query: 480 FQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
              DL+      EI  G  R H  E++ + F   G+        +G  Y   + G  PH 
Sbjct: 350 A--DLLAPEGYGEIIGGSQRIHDPELLKRRFEEHGLDMNT----YGWYYDLRRFGSVPHS 403

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G   GI+R V  + G ++VRE   FP 
Sbjct: 404 GFGLGIERTVAWICGLEHVRETIPFPR 430


>gi|302899207|ref|XP_003048003.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256728935|gb|EEU42290.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 526

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 108/569 (18%), Positives = 195/569 (34%), Gaps = 114/569 (20%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V +SGWV  VR   G+ F+DI D   +  V    D +   +A  +R    + + G  +  
Sbjct: 52  VEVSGWVRSVRKSSGVRFIDITDGSSMRPVQVVVDKS---LATDMRPGAAVRLKGTWVDE 108

Query: 81  SAETINANIITGQI-------ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           + E    N  + +        EL   ++E+L  ++    P+  + + PES+R     L  
Sbjct: 109 TKEESENNAESSEAPKTPANAELQVSEVEVLGHSDPQTYPIQNKYQTPESLR-TISHLRS 167

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R+     +      E F +   PI+T+S  EGA +       + G F+ 
Sbjct: 168 RTPLNSTMLRLRSDATALLTQFFFQERFQQSHPPIITSSDCEGAGEAFAVKASSPGEFFR 227

Query: 194 LPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            P+    + Q + + L A      + ++P FR E   + R   EFY L+ EMSFV   D 
Sbjct: 228 DPKYLTVSSQLHLEAL-AQALGNVWTLSPTFRAEQSDTSRHLSEFYMLEAEMSFV---DD 283

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++                                               + ++ +  ++S
Sbjct: 284 MD----------------------------------------------EVMDLAQRMLNS 297

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW--RLDESG 367
             R   ++ +     +   + +K      AF D +++    +   GL       R+  S 
Sbjct: 298 LARGLKELNAAKELEQNR-VDSKDPAERLAFNDLVDQEQLDRRWRGLLTTKKWPRVTYSE 356

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
            +  + P+A                             P       ++   ++A+++G  
Sbjct: 357 AIKILEPIADQFE-----------------------HKPTWGAGLQSEHEKYLAEKIGYD 393

Query: 428 NC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
              +     +I  +P                 F M Q        +    +    +DL+ 
Sbjct: 394 EATDSSVPIFITQYP------------REIKAFYMRQSA-----SSPDAGLTVDCFDLLV 436

Query: 487 NGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPHGGIAA 541
               E+A G +R H    + +    +G+      +             + G PPHGG   
Sbjct: 437 PSLGELAGGSMREHRLPQLEENMRALGLEVPSKRSPKGKELAWYLDLRRWGCPPHGGFGL 496

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G DR++  L G  NVR+V  FP     CD
Sbjct: 497 GFDRLLSYLTGVPNVRDVVAFPRHYERCD 525


>gi|317504976|ref|ZP_07962924.1| lysine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315663858|gb|EFV03577.1| lysine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 579

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 66/325 (20%), Positives = 129/325 (39%), Gaps = 21/325 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + Y T    +    D    V ++G +   R  G   F +++D  G  QV  + D  C E 
Sbjct: 36  NAYSTDIKDEFKDDDEKREVVIAGRMMSRRIMGKASFAELQDSKGRIQVYISRDEICPEE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---- 117
            K + +     +  +      +       TG+I + A++I +LS + +    V  +    
Sbjct: 96  NKDLYNVVFKKLLDIGDIIGVKGYVFRTQTGEISVHAKEITLLSKSLKPLPIVKYKDGVA 155

Query: 118 --REYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
             +     +R + R++DL  +  + +  +KR  I+ +MR       + E  TP L + + 
Sbjct: 156 YDKFDDPELRARQRYVDLIVNDGIKETFLKRATILRTMRNFFDEHGYTEVETPTLQSIAG 215

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y +  A + Y + L+  GF+  ++I   FR+E       P E
Sbjct: 216 GASARPFITHFNALNIDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKFHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN----------GNTVSNNFLRICYDDAI 283
           F  +++ + + + + +++  E +L  + +  +N            +    F R+   +AI
Sbjct: 274 FTCMELYVQYKDYNWMMSFTEQLLETICKAVNNGSTEVKNGEHTISFKAPFRRLPILEAI 333

Query: 284 RRY-GTDKPDLRNPIIMHNVTEHFV 307
           +   G D  D     I    TE   
Sbjct: 334 KEKTGFDLTDKNEEEIRKIATEELK 358


>gi|304311880|ref|YP_003811478.1| Lysyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301797613|emb|CBL45834.1| Lysyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 500

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 68/306 (22%), Positives = 126/306 (41%), Gaps = 34/306 (11%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H C  L  +                 ++G V R R      FL I+D  G  Q+  N 
Sbjct: 42  REHYCQGLQDAHRDQTREDLEKALISASVAGRVMRNRG----AFLVIQDMTGKIQLYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                E+   ++S  +  I G+      + I      G++ +   +  +L  +   PLP 
Sbjct: 98  QVLAPEVLDDIKSWDLGDIVGV------KGILHRSNKGELYVDMAEAHLLVKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
             +    + +R++ R++DL  +   +N  + R++ ++ +R  +   +F+E  TP++    
Sbjct: 151 KFKGLSDQEMRYRQRYVDLIVNEEVRNTFRVRSQTVDYIRNYLKQRDFLEVETPMMQVIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ + + L+  GF+R F+I   FR+E   +   P 
Sbjct: 211 GGATARPFVTFHNALDIDLY-LRIAPELFLKRLVVGGFERVFEINRNFRNEGLSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283
           EF  L+   ++ +  D+++  E +LRG+ E       V            F R+   +AI
Sbjct: 269 EFTMLEFYQAYADYRDLMDLTEEMLRGLAETVLGSTQVHYQGDVYDFGKPFRRMTVVEAI 328

Query: 284 RRYGTD 289
             +  D
Sbjct: 329 LHFNPD 334



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/206 (22%), Positives = 71/206 (34%), Gaps = 22/206 (10%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE----L 424
           V   G V           +   +   + D            C  A  AR  IA +    L
Sbjct: 306 VHYQGDVYDFGKPFRRMTVVEAILHFNPDLRAEQLATREAACEVA--ARLEIAIKDSYGL 363

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G I    FE               E ++         P       + ND       +++ 
Sbjct: 364 GKIQIEIFE------------ATAEHQLKDPTFITAYPTEVSPLARRNDHDPFVTDRFEF 411

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIA 540
              G EIA+G    + SE   + F     SK+  ++           A + G+PP  G  
Sbjct: 412 FVGGREIANGFSELNDSEDQAERFQKQVESKDAGDDEAMHFDQDYITALEYGLPPTAGEG 471

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  + ++R+V LFP  +
Sbjct: 472 IGIDRLVMLLTDSPSIRDVILFPHMR 497


>gi|218961042|ref|YP_001740817.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS)
           [Candidatus Cloacamonas acidaminovorans]
 gi|167729699|emb|CAO80611.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS)
           [Candidatus Cloacamonas acidaminovorans]
          Length = 431

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 78/321 (24%), Positives = 131/321 (40%), Gaps = 32/321 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPD--SACFEIAKSVRSEWV 70
              +G  VRL GWV  +R  G ++F+ +RD  G I  V   PD     FE AK +  E  
Sbjct: 10  EKYLGQEVRLKGWVRNIRHSGKLLFIILRDGTGEIQTVAFQPDLGEKAFETAKHLTLESS 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I G+      +        G  EL   +++ L +A+E P    G++E+        R 
Sbjct: 70  VIICGIPNLHPKQE-------GVYELQVTQVQPLQIADEYP---IGKKEHGPDFLLSNRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L +R       +  R  +  ++   +   NFI   +PILT ++ EG          ++G 
Sbjct: 120 LWIRSQKQWAILRIRHTVYYAICNYLNEHNFIRFDSPILTPNACEGTTTLFELDYFDEGK 179

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q+ Q Y +  + S F R +   P FR E  ++ +   EF+ +D E +FVE D+ +
Sbjct: 180 AY-LSQSGQLYLETGIMS-FGRVYDFGPVFRAERSKTRKHLTEFWMMDAEAAFVEHDENM 237

Query: 251 NTMENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRYGTDKPDL-- 293
              E+++R V     +   +                  F R+ + +A+        D+  
Sbjct: 238 QIQEDLIRYVIRTVLSECALELQILERNTESLKAADAPFKRMTHYEAVELLRQKGSDITH 297

Query: 294 RNPIIMHNVTEHFVHSEFRVF 314
              +   +       SE  VF
Sbjct: 298 SKDLGAQDEVLLTEDSEVPVF 318



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 37/115 (32%), Gaps = 10/115 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +  +          I    +       E+  G  R    E++L     
Sbjct: 321 RWPKEIKAFYMKRDPLNPNLVLGDDLIAPEGF------GELIGGSQREDDYELLLSRMQA 374

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             +  +  +          + G  PH G   G++R+V  L G  ++RE   FP  
Sbjct: 375 ENMPIDDYQ----WFLDLRKYGSVPHSGFGVGLERLVAWLSGTPHIRETIPFPRM 425


>gi|83816690|ref|YP_445039.1| lysyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83758084|gb|ABC46197.1| lysyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 514

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 95/575 (16%), Positives = 183/575 (31%), Gaps = 136/575 (23%)

Query: 10  GDLGVSDVGS----FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
            DL   + G      V ++G +  +R  GG  F D+RD  G  QV         +    V
Sbjct: 49  DDLHQPEDGEVGGYKVSVAGRITGLRVMGGSAFFDLRDETGTIQVYVRSQDLGDDFYDEV 108

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSA-QKIEILSVAEELPLPVFGERE----- 119
            +E  L   G ++          +  G++ + A  + ++L+ A      V    E     
Sbjct: 109 FTE--LFDIGDIVGVEGFVFRTGM--GEVTVRAADEFQLLAKALRPLPVVKETEEETYYE 164

Query: 120 -YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
              +  R++ R++DL  +   + + + R+++I++MR  +  +  +E  TP+L        
Sbjct: 165 VTDKEFRYRQRYVDLAVNEDVRGVFRQRSKLISTMRGFLDEQGCLEVETPVLQPVYGGAS 224

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A  F           Y L  A + Y + L+  GF+  ++I                    
Sbjct: 225 AAPFETHHNALDMPLY-LRIADELYLKRLLVGGFEGVYEIG------------------- 264

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
                                    ++F N      +       +    Y       ++ 
Sbjct: 265 -------------------------KDFRNEGLSRFHNPEFTMMECYVAY-------KDY 292

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             M ++TE  + +         +V   +E   I   GG     F + + E          
Sbjct: 293 RWMMDLTEDLLRTAATALHDTPTV--AFEGHEIDFGGGWTRIPFFEAIEE--------AT 342

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
            +  +R              +  ++   E     ++   G                    
Sbjct: 343 GFDLYRAGAD----------RVYDVAANELGLEEVEADMG----------------LGGL 376

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            + I  E   +     +  ++ D+P               +P        E L       
Sbjct: 377 LDEIFSE--TVEPTLVQPTFVTDYP------------IELSPLAKKHREKEGL------- 415

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF--------GGLYRA 528
               +++LV  G E+A+     +  +   + F      +    +              RA
Sbjct: 416 --VERFELVVAGREVANAFSELNDPQDQRERFERQARQRAAEVDDDVDPEDLIDEDYLRA 473

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            + GMPP  G+  GIDR+ M+L G +++R+V LFP
Sbjct: 474 LEYGMPPAAGLGVGIDRLTMILTGQESIRDVILFP 508


>gi|45657773|ref|YP_001859.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|59798559|sp|Q72R38|SYK_LEPIC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|45601013|gb|AAS70496.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 495

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 68/314 (21%), Positives = 123/314 (39%), Gaps = 30/314 (9%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +L G +H  R  G   F  ++D+ GI Q+ A  D          +S  +  I GL     
Sbjct: 55  KLGGRLHSKRVMGKASFAHLKDNSGIIQLYATKDDLGETQYSIFKSLDLGDIIGL----- 109

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFLDLRR 135
            E        G+I L    +E+LS        V  +             R++ R++DL  
Sbjct: 110 -EGYLFKTQKGEITLHVTSVELLSKCIRPLPVVKEKDGVVYDAFADVEQRYRMRYVDLIV 168

Query: 136 D-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           +  +    + R++I++ +R  +  E F+E  TP++   +    AR F+          + 
Sbjct: 169 NDHVRDTFITRSKIVSEIRSFLTQEGFLEVETPMMQPIAGGAAARPFVTHHNTLDMQLF- 227

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  G DR F++   FR+E   +   P EF  ++  M+F +   +L+  
Sbjct: 228 LRIAPELYLKRLIVGGMDRVFELNRNFRNEGISTKHNP-EFTMMEAYMAFGDMSTMLDLT 286

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           E ++  + ++                     +YG D  DL  P       +         
Sbjct: 287 ERLITHLAQKICGTLK--------------IQYGKDLIDLSPPWKRTTYVDIIKEYSGID 332

Query: 314 FSKILSVNPGYEVW 327
           FS+I+S+    +  
Sbjct: 333 FSQIISLEEAKKKA 346



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 70/198 (35%), Gaps = 34/198 (17%)

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNHIAQELGIINCNCFE 433
           + K  + ++   I    + +   S   +           A +  +  A+       N  +
Sbjct: 324 IIKEYSGIDFSQIISLEEAKKKASELKVDVSKCQTIWKVADEVFSEKAE------PNLIQ 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS-IKAFQYDLVCNGFEIA 492
             +I D+P                        +  L  ++        +++    G EI 
Sbjct: 378 PIFITDYP----------------------KELSPLAKSNPDKPGYVERFEPYVAGREIG 415

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +     +      + F +    +E  ++          RA + GMPP GG+  GIDR+VM
Sbjct: 416 NAFTELNDPFDQKERFEDQVKQREAGDDEAFMMDEDYIRALEYGMPPTGGLGIGIDRLVM 475

Query: 549 LLLGAKNVREVSLFPMSQ 566
           LL  + ++R+  LFP+ +
Sbjct: 476 LLTNSHSIRDTILFPLMR 493


>gi|325280339|ref|YP_004252881.1| Lysyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324312148|gb|ADY32701.1| Lysyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 573

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 70/339 (20%), Positives = 132/339 (38%), Gaps = 24/339 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F +++D  G  QV  + D    + A +  +     +  +    
Sbjct: 55  VVIAGRMMSRRIMGKASFFELQDATGRIQVYVSRDDISTDEASTAYNTVFKKLMDIGDIV 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------YPESIRFKYRFLDLR 134
             +       TG+I + A+++ +LS +      V  +             R++ R+LDL 
Sbjct: 115 GVKGFVFRTQTGEISVHAKELTMLSKSLRPLPIVKEKEGKVFDAFTDPEQRYRQRYLDLI 174

Query: 135 RDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +   K   VKRTR+IN++R    ++ ++E  TP+L A      AR F+          Y
Sbjct: 175 VNPQVKEVFVKRTRMINAIRNFFNSKGYLEVETPVLQAIPGGASARPFITHHNALDIPLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF+  ++ +  FR+E       P EF  +++ +++ +   ++N 
Sbjct: 235 -LRIANELYLKRLIVGGFEGVYEFSRNFRNEGMDRTHNP-EFTCMEIYVAYKDYLWMMNF 292

Query: 253 MENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY-GTDKPDLRNPIIMHNV 302
            E ++       +                 F R+   DAI+ Y G D       +    +
Sbjct: 293 TEEMIETAALAINGTTKAVIGENEIDFKRPFRRVRMADAIKEYTGYDI----EKMSEEEL 348

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
            E  V  E  V   +       E++    +G      F 
Sbjct: 349 YEACVKMEIPVDKTMGKGKLIDEIFGEKCEGHYIQPTFI 387



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E         +  P+      K +        +++L  NG E+A+     +     L+ F
Sbjct: 378 EGHYIQPTFIYDYPKEMSPLTKKHRENPELTERFELFVNGKEVANAYSELNDPIDQLERF 437

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +    +E  ++          RA + GMPP  G+  GIDR+ M L  + ++++V  FP 
Sbjct: 438 QDQLKLQERGDDEAMYIDYDFVRALEYGMPPTSGMGIGIDRLCMFLTNSASIQDVLFFPQ 497

Query: 565 SQ 566
            +
Sbjct: 498 MK 499


>gi|154151870|ref|YP_001405488.1| lysyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|154000422|gb|ABS56845.1| lysyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 514

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 66/285 (23%), Positives = 118/285 (41%), Gaps = 9/285 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT    ++        V  +G +  +R HG  IF D+ D  G  Q+         E    
Sbjct: 43  RTKF-SEITHEKSAEGVVTAGRLSIIRNHGKTIFADLGDESGKIQLYIRKADLGDEAFDF 101

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
                     G  +  +       +  G+I +   KI++L+ A   PLP           
Sbjct: 102 FNQY---IERGDFVGVTGHVFRTKL--GEITIWVDKIQLLTKA-VCPLPEKFHGLTDVEK 155

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           R++ R++DL  +   +   + R+RI++S+R  +   +F+E  TPIL              
Sbjct: 156 RYRQRYVDLIANEEVRQNFRNRSRILSSIRRYLSERDFLEFETPILQPVYGGANARPFTT 215

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                G    L  AP+ Y + L+  GF+R F+IA  FR+ED  +   P EF  +++  ++
Sbjct: 216 FHNCLGQKLFLRIAPELYLKRLVVGGFERIFEIARNFRNEDIDTHHNP-EFTMVEIYWAY 274

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
            +  D+++  E+ L  + +E  N   ++     I +   +RR   
Sbjct: 275 HDVYDMMDLTEDFLATLVQEVHNKTEITFEGTSISFAKPLRRLSM 319



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 55/147 (37%), Gaps = 25/147 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            ++     +  +I DFP      E   +   H                        +++L
Sbjct: 367 NMVEEKLIQPTFIYDFPV-----ENSPLAKRHR----------------TKEGFTERFEL 405

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIA 540
              G E+A+G    +      + F      ++      +        A   GMPP GG+ 
Sbjct: 406 FIYGMELANGFSELNDPLDQKERFEAQDKKRQLGDLEAQMIDYDFINALGYGMPPTGGVG 465

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            GIDR+VMLL G  +++EV LFP  ++
Sbjct: 466 IGIDRLVMLLTGNNSIKEVILFPSMKS 492


>gi|303328113|ref|ZP_07358552.1| lysine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302861939|gb|EFL84874.1| lysine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 527

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 58/286 (20%), Positives = 115/286 (40%), Gaps = 21/286 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +  +R  G + F  + D  G  Q  A+ +    E  K V+   V  I G+      
Sbjct: 93  IAGRIVSLRSFGKVAFFHLMDQSGRIQCYASREHLDEETYKIVKKLDVGDIVGV------ 146

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKN 141
                   TG++ ++ + +++++ +   PLP           R++ R++DL       + 
Sbjct: 147 SGHLFRTKTGELTIACRSLKLITRS-MRPLPEKYHGLKDMETRYRQRYVDLIVTPRAREI 205

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQ 200
             KR+ I+   R  M    F+E  TPI+   +    A+ F           + L  AP+ 
Sbjct: 206 FAKRSLIVREFRRFMEEHGFMEVETPIMQPLAGGATAKPFKTHHNALDLDLF-LRIAPEL 264

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF++ F++   FR+E   +   P EF   +   ++   +D++N  E +   +
Sbjct: 265 YLKRLLVGGFEKVFELNRSFRNEGIDTRHNP-EFTMCEFYWAYATFEDLMNFTEKLFAHL 323

Query: 261 FEEFSN----------GNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
                            +    ++ R+ + D++   G   PD  N 
Sbjct: 324 AMAACGTTVVTYQGQEIDLTPGHWKRLSFYDSLTEIGGHSPDFYND 369



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            ++ + E  K+   H  +  P       + NDL      +++L   G E+++     +  
Sbjct: 397 LFDLDVE-GKLIQPHFIYHYPTEISPLSRRNDLRPEITDRFELFITGRELSNAFSELNDP 455

Query: 502 EVM----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                   +         +   +      RA + GMPP  G   GIDR+VMLL  + ++R
Sbjct: 456 VDQRLRFEEQVREREAGDDEAHSMDEDYLRALEYGMPPAAGQGVGIDRLVMLLTDSASIR 515

Query: 558 EVSLFP 563
           EV LFP
Sbjct: 516 EVILFP 521


>gi|42518374|ref|NP_964304.1| lysyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|41582659|gb|AAS08270.1| lysyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 513

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 81/440 (18%), Positives = 157/440 (35%), Gaps = 37/440 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L      +  +++G +   R  G + F D+ D  G  Q+    D    + 
Sbjct: 44  EKYSNEDKDELNADMPMT--KIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDN 101

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  +   +    G  +    E +     TG++ + A  I  LS A   PLP   +    
Sbjct: 102 YKIFKKSDI----GDFLGIDGEVM--KTDTGELTIRATHITFLSKALR-PLPNKWDGLKD 154

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
               ++ R+LDL  +         RT+II ++R  +   +F+E  TP+L        AR 
Sbjct: 155 VEQIYRQRYLDLITNHDSYMRFVHRTQIIQAIRDYLNNRDFLEVETPVLHNIPGGAEARP 214

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  A +   + L+  G +R ++I   FR+E   +   P EF +L+ 
Sbjct: 215 FITHHNALDIDLY-MRIALELPLKRLIVGGMERVYEIGRVFRNEGLDTKHNP-EFTELET 272

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  D+++  E ++R   +                 D  I   GTD  DL  P   
Sbjct: 273 YAAYWDFHDVMDEAEGIIRAAAKVV-------------SPDGKITYQGTD-IDLGKPFRR 318

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++ +         F K +++    +V                 +N +    G+  +   
Sbjct: 319 VHMVDLIKEKTGVDFWKPMTIEEARKVADEHNVHYESYWKVGHIINAFFEEFGEGSIVQP 378

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVR---LDMQDGDSCFFIA---GDPLKFCSFA 413
            +     G+   + P+AK          R     +  + G++   +        +F    
Sbjct: 379 TFVY---GHPVEVSPLAKKNADDPRFTDRFEIFIMGAEYGNAFSELNDPDDQRHRFEDQM 435

Query: 414 ADARNHIAQELGIINCNCFE 433
           A+ R     E  +I+ +   
Sbjct: 436 AE-REAGNDEADMIDEDYLR 454



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 6/153 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A E  +   + ++   I++  F E+   E  I      +  P       K N     
Sbjct: 343 RKVADEHNVHYESYWKVGHIINAFFEEF--GEGSIVQPTFVYGHPVEVSPLAKKNADDPR 400

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGM 533
              ++++   G E  +     +  +     F +    +E   +          RA + GM
Sbjct: 401 FTDRFEIFIMGAEYGNAFSELNDPDDQRHRFEDQMAEREAGNDEADMIDEDYLRAMEFGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 461 PPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 493


>gi|21674209|ref|NP_662274.1| lysyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|39932217|sp|Q8KCM7|SYK_CHLTE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|21647373|gb|AAM72616.1| lysyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 511

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 63/305 (20%), Positives = 123/305 (40%), Gaps = 29/305 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +  +R  G   FL I+D  G  Q+    D        + +   +  I G+    
Sbjct: 67  VSVAGRIMAIRRMGKASFLHIQDSEGRIQIYLKKDDVGEASYNTFKLLDIGDIVGV---- 122

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----------YPESIRFKYRF 130
                     TG+I + A++ E+L+ +         +                +R++ R+
Sbjct: 123 --SGFTFKTKTGEISVHARQFELLAKSLRPIPIAKEKEVDGQKVIYDAFSDRELRYRQRY 180

Query: 131 LDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQ 188
           +DL  +   +   +KRT+I+  MR    +  ++E  TPIL        AR F        
Sbjct: 181 VDLIVNPEVRGTFIKRTKIVALMRNYFASNGWLEVETPILQPIYGGAAARPFTTHHNALD 240

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  A + Y + L+  GFD  F+ A  FR+E       P EF Q+++ +++ +   
Sbjct: 241 MQLY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEGIDRFHNP-EFTQVELYVAYKDYIW 298

Query: 249 ILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           ++  +E++L     E +  +          +   F R+   D+IR Y   +   ++   +
Sbjct: 299 MMELVEDLLHKACVEVNGKDSTMFLGNEINLKPPFRRLTIADSIREYTGMEIRGKSEAQL 358

Query: 300 HNVTE 304
            ++ +
Sbjct: 359 RDIAK 363



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 7/157 (4%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           A  R+ IA++LG+          I+D  F E+ E   K+         P+      K + 
Sbjct: 356 AQLRD-IAKDLGLELDPKISSGKIIDEIFGEFVE--PKLIQPTFITDYPEEMSPLAKKHR 412

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
                  +++L+  G E+ +     +   +  +        ++  ++          RA 
Sbjct: 413 SEPGLVERFELIVGGKEVCNSFSELNDPVIQRERLEEQARLRQRGDDEAMIVDEDFLRAL 472

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP  G+  GIDR+VMLL G  ++R+V  FP  +
Sbjct: 473 EYGMPPCAGLGIGIDRMVMLLTGQDSIRDVIFFPHMK 509


>gi|15606442|ref|NP_213822.1| lysyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6226183|sp|O67258|SYK_AQUAE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|2983651|gb|AAC07218.1| lysyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 597

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 70/334 (20%), Positives = 127/334 (38%), Gaps = 22/334 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L+G +  +R  G  IF  I+D  G  Q+    D    E  K           G ++  
Sbjct: 154 VSLAGRLVSMRSMGKAIFGHIQDLTGKIQIYLKKDVIGEEKLKFFNDY---IDVGDIVGV 210

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLH 139
             +    N  TG++ +  ++ ++L+ +   PLP          +R++ R+LDL       
Sbjct: 211 RGKLFRTN--TGELTVEVEEYQLLAKSL-HPLPEKWHGLKDVEVRYRQRYLDLIANPEAR 267

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  + RT++I  MR       FIE  TPIL   +S   AR F+      +   Y L  AP
Sbjct: 268 RIFMLRTKLITEMRKFFEMHGFIEVETPILQPIASGANARPFVTYHNFLETELY-LRIAP 326

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF R ++I   FR+E       P EF  ++   ++ +  D++   E++  
Sbjct: 327 ELYLKRLIVGGFPRVYEIGKNFRNESVDRTHNP-EFTMVEFYAAYWDYHDLIKFTEDMFV 385

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
            + E+                      +  D       +   ++ +     +   F K L
Sbjct: 386 YLLEKTLG-----------TLKVKYGEWELDFSPPFKKVRYFDLLKEKTGKDKDFFLKDL 434

Query: 319 S-VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
             +    +   IP      +    D++ E    +
Sbjct: 435 EGLRKLAKELEIPDVERMTHAKLLDKVFEKVAEE 468



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 9/164 (5%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP-FTMPQ 463
           D   F       R  +A+EL I +        ++D   +E   EE  I       F    
Sbjct: 426 DKDFFLKDLEGLR-KLAKELEIPDVERMTHAKLLDK-VFEKVAEEDLIQPTFVIDFPKIL 483

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF- 522
             +      D   +   +++L+   +E+A+     +      + F      K++ +    
Sbjct: 484 SPLAKTHREDPDLV--ERFELIIARYEVANAYTELNDPFDQKERFLEQLKEKQMGDEEAM 541

Query: 523 ---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                  RA + GMPP  G   GIDR+VM+L    ++REV LFP
Sbjct: 542 DMDEDFIRALEYGMPPTAGEGIGIDRLVMILANTDSIREVILFP 585


>gi|225870836|ref|YP_002746783.1| lysyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225700240|emb|CAW94458.1| lysyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 497

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 60/339 (17%), Positives = 120/339 (35%), Gaps = 28/339 (8%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G+L                    ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTTNSGELKEKYSDKTKEDLQELQATAIIAGRLMTKRGKGKVGFAHLQDRQGQIQIYVRK 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   +     +   +    G  +    + +  ++  G++ + A K+  LS +   PLP 
Sbjct: 97  DSVGDDNYDIFKKADL----GDFIGVEGDIMCTDM--GELSIKATKLTHLSKSLR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                      ++ R LDL  +       + R+++I+ +R  +    F+E  TP+L   +
Sbjct: 150 KFHGLTDIETIYRKRHLDLISNRSSFERFITRSKMISEIRRYLDGLGFLEVETPVLHNEA 209

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+            L  AP+ + + L+  G +R ++I   FR+E   +   P 
Sbjct: 210 GGAAARPFITHHNAQDIDM-VLRIAPELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP- 291
           EF  +++  ++ +  D++   E +++   +       +      I   +  RR       
Sbjct: 268 EFTSIEVYEAYADYLDMMTLTEGIIQHAAKAVKGEGPIDYQGTEIKLHEPFRRVHMVDAI 327

Query: 292 ------DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
                 D    +     T         V     SV    
Sbjct: 328 KEVTGIDFWPEMTFEEATALANEKHVPVEKHFTSVGHII 366



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K N   S    +++L     E A+     +     L  F     +KE+ ++   G     
Sbjct: 396 KKNPEDSRFTDRFELFIMTKEYANAFTELNDPIDQLSRFKAQAAAKELGDDEATGIDYDF 455

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 456 VEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 496


>gi|254785321|ref|YP_003072750.1| lysine--tRNA ligase [Teredinibacter turnerae T7901]
 gi|259511535|sp|C5BRM0|SYK_TERTT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|237687139|gb|ACR14403.1| lysine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 498

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 67/310 (21%), Positives = 128/310 (41%), Gaps = 44/310 (14%)

Query: 6   THSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH    L  +               V ++G V R R      F+ ++D  G  Q+    +
Sbjct: 42  THHADALQQAHGSKEKAALEEAAMVVSVAGRVIRNRG----AFMVLQDGSGQIQLYVTKE 97

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +  F  AKS+    ++ + G++              G + ++  + ++L+ A   PLP  
Sbjct: 98  ARGF--AKSLDLGDIIGVSGVLHKSGK---------GDLYVNLDEYKLLTKALR-PLPDK 145

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 + +R++ R++DL     + K  + R+RI+  +R  +    F+E  TP+L A   
Sbjct: 146 YHGLADQELRYRQRYVDLIANPEVRKTFLLRSRIVQFIRDYLNGREFLEVETPMLQAIPG 205

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F           Y L  AP+ Y + L+  GF+R ++I   FR+E   +   P E
Sbjct: 206 GATARPFETHHNALDIDMY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGLSTRHNP-E 263

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN--------------GNTVSNNFLRICY 279
           F  L+   ++ + +D+++  E++LR + +                      +  F+R+  
Sbjct: 264 FTMLEFYQAYADYNDLMDLTEDMLRNLAQTVLGSTEVTATLGEDESVTYDFAKPFVRLSV 323

Query: 280 DDAIRRYGTD 289
            D+I  +  D
Sbjct: 324 FDSILHFNPD 333



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 6/153 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+ LGI   + +    +     +E   E  ++         P       + ND    
Sbjct: 346 RAVAKNLGIPMKDNWGLGKV-QIEIFEKTVE-HRLIQPTFITEYPTEVSPLARRNDDNPF 403

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVM----LQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +++    G EIA+G    + +E       Q  +      +   +      RA + G+
Sbjct: 404 VTDRFEFFVGGREIANGFSELNDAEDQADRFKQQVAEKNAGDDEAMHYDADYVRALEYGL 463

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 464 PPTAGEGIGIDRLVMLLTDSASIRDVLLFPHMR 496


>gi|90413185|ref|ZP_01221181.1| lysyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90325876|gb|EAS42328.1| lysyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 502

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 64/292 (21%), Positives = 133/292 (45%), Gaps = 25/292 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + + G  V ++G V   R      FL I+D  G  Q  A+       + K ++ ++    
Sbjct: 56  LEEEGHIVAIAGRVMAKRGP----FLAIQDVSGRIQAYADKT-----VQKELKEKYSGLD 106

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +   +    G + ++    E+L+ A   PLP        + +R++ R++DL
Sbjct: 107 IGDIIGVKGQLHLSG--KGDLYVTMDNYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 163

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N ++ R+++++++R  M  ++F+E  TP++        AR F+          
Sbjct: 164 IVNEDSRNTMIMRSKVVSAIRNFMTKKDFMEVETPMMHVIPGGATARPFITHHNALDIDM 223

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++  M++ + +D+++
Sbjct: 224 Y-LRVAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYNDLMD 281

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
             E +L  +  +      +            + RI   +AI++Y  D  +++
Sbjct: 282 LTEEMLSSIATDLHGSPKLPYGDAIVDFGGPYPRISMLNAIKQYNPDNAEIQ 333



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 6/111 (5%)

Query: 459 FTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F        S     ND       +++    G E+A+G    + ++   Q F     +K+
Sbjct: 384 FITEYPADISPLARRNDTNDFITDRFEFFIGGREVANGFSELNDAQDQDQRFKAQVNAKD 443

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             ++           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 444 AGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|290889690|ref|ZP_06552779.1| hypothetical protein AWRIB429_0169 [Oenococcus oeni AWRIB429]
 gi|290480687|gb|EFD89322.1| hypothetical protein AWRIB429_0169 [Oenococcus oeni AWRIB429]
          Length = 496

 Score =  194 bits (493), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 76/307 (24%), Positives = 124/307 (40%), Gaps = 30/307 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCIDGL 76
             V ++G +   R  G IIF DIRD  G  Q+ A  D     + + +      +L   G 
Sbjct: 62  KHVIIAGRIMAKRGAGKIIFADIRDVSGTVQIYARRDDLADNYALIRRADLGDILGFSGT 121

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           VM   A         G+  +   K+  LS A   PLP           R++ R+LDL  +
Sbjct: 122 VMKTDA---------GETTILIDKLTWLSKALR-PLPDKYHGLTDIDTRYRKRYLDLISN 171

Query: 137 TLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-RDFLVPSRVNQGSFYAL 194
                  +KR++I+ ++R  M +  F+E  TPIL  S+   A R F+          Y L
Sbjct: 172 PKSFEVFIKRSKIVKAIRNYMDSIGFLEVETPILQNSAGGAAARPFVTHHNALDIDMY-L 230

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + Y + L+  G +R ++I   FR+E   +   P EF  L+   ++ +  D++   E
Sbjct: 231 RIATELYLKRLIVGGMERVYEIGRIFRNEGMDTRHNP-EFTTLESYGAYWDLSDVMIETE 289

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
           N++R   +  +              +D    Y   K DL       ++TE         F
Sbjct: 290 NIIRAAAKSIN--------------EDGFIDYQGHKIDLSKDFAKRSMTELIKEKTGIDF 335

Query: 315 SKILSVN 321
            K + + 
Sbjct: 336 DKKIDLE 342



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 4/123 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           EK +      +  P       K  D       +++L   G E  +     +      Q F
Sbjct: 374 EKSLIEPTFVYHFPLEVSPLAKKEDNNPDFVQRFELYIAGGEYGNAFTELNDPIDQRQRF 433

Query: 509 SNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +E      E+       A + GM P GG+  GIDR+ MLL    +VR+V LFP 
Sbjct: 434 EAQAAERENGNDEAESIDEDYIEALEHGMAPTGGLGIGIDRLTMLLTNQTSVRDVLLFPT 493

Query: 565 SQN 567
            +N
Sbjct: 494 MRN 496


>gi|303257505|ref|ZP_07343517.1| lysine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302859475|gb|EFL82554.1| lysine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 511

 Score =  194 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 59/292 (20%), Positives = 112/292 (38%), Gaps = 12/292 (4%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           + +  +L  + V   V ++G V   R  G   FL ++D     Q          E     
Sbjct: 61  SKTPEELEAAPV--EVTVAGRVMLKRVMGKASFLTVKDGTDHIQFFITKAEVDDETYDFF 118

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           +    +   G ++  +         TG++ +  +   +L+     PLP           R
Sbjct: 119 KKMVDI---GDIVGATGTLFFTK--TGELSVRVKNFRLLTK-NIRPLPDKFHGLSDPETR 172

Query: 126 FKYRFLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
           ++ R++DL  +    +  + R++ I   R  M+  +F+E  TP+L        A+ F+  
Sbjct: 173 YRQRYVDLIMNESTRRTFMIRSKAIAETRKFMMEHHFMEVETPMLHPIPGGANAKPFITH 232

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L+  GF+R F++   FR+E       P EF  ++   ++
Sbjct: 233 HNALDMDMY-LRIAPELYLKRLVVGGFERVFELNRSFRNEGVDVRHNP-EFTMMEFYAAY 290

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            E   +++  E +LR V E+      +      I       R    +  L+ 
Sbjct: 291 KEYHWLMDYTEKLLRTVAEKTIGTAVIQYQGHTIDLTKPFDRLTAKEAVLKY 342



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
           + +D +     +++L   G E A+G    +  +     F      K   ++         
Sbjct: 408 RASDKVPGITERFELFMAGRETANGFSELNDPQDQAARFMAQAKLKASGDDEAMYYDADY 467

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            RA + G+PP GG   G+DR VMLL  + ++R+V LFP  +
Sbjct: 468 VRALEYGLPPTGGCGVGLDRFVMLLTDSPSIRDVLLFPHMR 508


>gi|170583906|ref|XP_001896781.1| hypothetical protein [Brugia malayi]
 gi|158595913|gb|EDP34374.1| conserved hypothetical protein [Brugia malayi]
          Length = 218

 Score =  194 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 87/199 (43%), Gaps = 10/199 (5%)

Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
             F+ GD           R+ + + + +      EF WI  FP +  N E  +++ AH+P
Sbjct: 2   VLFMWGDDTCVKRTLGQLRHLVGEAMHLRAEQRMEFVWITHFPLFSRNAE-GRLESAHHP 60

Query: 459 FTMPQGGMESLKGND--LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           FT P      L      LLSI    YDLV NG E+  G IR H ++V     S       
Sbjct: 61  FTAPIPDDVPLLYEPNKLLSITGQHYDLVLNGVELGGGSIRIHNADVQRHVLST---IYG 117

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLL 572
                   + +A   G PPHGG A G+DR V LL G  B    +R+V  FP S+   DL+
Sbjct: 118 ESLEEMEHMIKALSYGAPPHGGFAIGLDRYVALLFGRGBSSVPIRDVIAFPKSKEGNDLM 177

Query: 573 MGSPSTVSVEQLRELGLRI 591
              P   +  QL   G+ +
Sbjct: 178 TKCPVEATPSQLSRYGISV 196


>gi|258647926|ref|ZP_05735395.1| asparagine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260851765|gb|EEX71634.1| asparagine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 467

 Score =  194 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 108/291 (37%), Gaps = 28/291 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EI 61
            RT     L  +D  + V + GWV   R    +IF+ + D   I  V    D+  F  E+
Sbjct: 5   KRTKIIDVLKRTDFDTVVNVRGWVRTKRGSKNVIFIALNDGSTINNVQIVADTEAFDAEL 64

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K + +   L ++G ++               +E+ A++IEIL             +   
Sbjct: 65  VKDITTGACLSVNGALVQSQGSGQV-------VEIQAKEIEILGTCGSDFPMQKKGQ--S 115

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                +Y  + LR +T       R  +  ++        F    TPI+TAS  EGA    
Sbjct: 116 FEYMRQYAHMRLRTNTFGAVFRIRHNMAMAIHHYFHEHGFFYFHTPIITASDCEGAGQMF 175

Query: 182 VPSRVNQ--------------GSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDED 224
             +  N                 F+  P +     Q +  L A+     +   P FR E+
Sbjct: 176 QVTTKNLYDLKKDENGKIDYSDDFFGKPTSLTVSGQLEGELGATSLGAIYTFGPTFRAEN 235

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
             + R   EF+ ++ E++F +  D ++  E+ L+   +   +      NFL
Sbjct: 236 SNTPRHLAEFWMIEPEVAFNDITDNMDLAEDFLKYCIQWAFDNCQDDLNFL 286



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 55/150 (36%), Gaps = 18/150 (12%)

Query: 430 NCFEF--CWIMDFPFYEWNEEEKKIDFAHN----PFTMPQGGMESL---KGNDLLSIKAF 480
             FEF   W +D      +E E+ +   H       T     +++       D  +++A 
Sbjct: 326 KKFEFPIYWGVDL----ASEHERYLVEEHFKRPVILTDYPKEIKAFYMKLNEDGKTVRAM 381

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
              L     EI  G  R    + +      + +  + +           + G  PH G  
Sbjct: 382 DV-LFPQIGEIIGGSEREADYDKLQTRIQEMDLPMKDMW----WYLDTRKYGTCPHSGFG 436

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R+++ + G +N+R+V  FP +    D
Sbjct: 437 LGFERLILFVTGMQNIRDVIPFPRTPKNAD 466


>gi|115380061|ref|ZP_01467105.1| lysyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115362936|gb|EAU62127.1| lysyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 477

 Score =  194 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 70/305 (22%), Positives = 119/305 (39%), Gaps = 36/305 (11%)

Query: 4   YR-THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           YR  H   D+                    ++G +  +R  G   F+ +RD  G  QV  
Sbjct: 46  YRAEHLAADIHAKHASQSPEELEKDAPTYTVAGRIVAMRTFGKAAFIKLRDRSGEIQVHM 105

Query: 53  NPDSAC--FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
             D+    +E  K       L   G V             TG++ LSA K   L+ +   
Sbjct: 106 KKDALGDSYEAFKLCDLGDFLGATGPV---------FRTKTGELSLSATKFTPLTKSLR- 155

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL 169
           PLP          IR++ R+LDL  +   K    KR +++  +R  + + ++IE  TP++
Sbjct: 156 PLPEKWHGLTDVEIRYRQRYLDLVSNPEVKQTFLKRNKLVRFIREFLDSRDYIEVETPMM 215

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
               S   AR F           Y +  AP+ Y + L+  G +R ++I   FR+E   + 
Sbjct: 216 HPLVSGAAARPFKTHHNALDIELY-MRIAPELYLKRLVVGGIERVYEINRNFRNEGISTR 274

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICY 279
             P EF  L+   ++   +D+++  E ++    +  +    V            + RI  
Sbjct: 275 HNP-EFTMLEFYQAYATYEDLMDLTEQMISEAAQAVTGATKVPYQGHELDFGKGWKRIPM 333

Query: 280 DDAIR 284
            +AIR
Sbjct: 334 TEAIR 338


>gi|218289169|ref|ZP_03493405.1| asparaginyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218240752|gb|EED07931.1| asparaginyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 431

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 73/309 (23%), Positives = 122/309 (39%), Gaps = 31/309 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWV 70
              VG  V L GW++  R  G I FL +RD  G+ Q V    N     F  + ++  E  
Sbjct: 11  ADHVGQDVLLRGWLYNKRSSGKIHFLQVRDGTGLVQCVVVKSNVSDETFAASDALTQESS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L ++G V   +          G  E+   +IE + +A E P      +E+       +R 
Sbjct: 71  LVVEGTVRQDAR-------APGGYEIDVSRIEPVQLAHEYP---IALKEHGIDFLLDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L +R       +  R  I  +++  + +  F     PILT +S E   +       +  +
Sbjct: 121 LWIRVPRQRAILRIRAEIERAIQAFLDSNGFTRVDAPILTPASCEDTTELFETRYFDDTA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A    + +   PCFR E  ++ R   EF+ ++ EM+FVE ++ L
Sbjct: 181 Y--LTQSGQLYMEAA-AMALGKVYCFGPCFRAEKSKTRRHLIEFWMVEPEMAFVEHEENL 237

Query: 251 NTMENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRYGTDKPDLRN 295
              E+++  V +   +                      F R+ YDDAIR       D+  
Sbjct: 238 RVQESLVEHVVQSVIDRCAPELELLGRDIARLERVRAPFARMSYDDAIRWLRDHGFDIAW 297

Query: 296 PIIMHNVTE 304
                +  E
Sbjct: 298 GDDFGSPHE 306



 Score = 77.8 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 47/129 (36%), Gaps = 19/129 (14%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGM--ESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           D P +      ++       F M       E +   D+L+ + +         EI  G  
Sbjct: 314 DTPVF-----IERYPTKLKAFYMQPDPDRPEVVLCADMLAPEGYG--------EIIGGSQ 360

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  E++   F    +     E  +G      + G  PH G   G++R +  + G  +V
Sbjct: 361 RIHDYELLKARFEEHRLP----EETYGWYLDLRRYGSVPHSGFGLGLERTIAWICGLDHV 416

Query: 557 REVSLFPMS 565
           RE  LFP  
Sbjct: 417 REAILFPRM 425


>gi|229175266|ref|ZP_04302781.1| Asparaginyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608098|gb|EEK65405.1| Asparaginyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 463

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 70/372 (18%), Positives = 131/372 (35%), Gaps = 61/372 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCID 74
            G  V++SGW+  +R      F+++ D      V    + +   F+    +     + ++
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSSVKVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V++               E+ A+KI+I  +++    P+  +R   E +R     L  R
Sbjct: 77  GTVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+   TPI+T S  EGA +    +  N       
Sbjct: 128 TNAFSATFRVRSVAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQNLNNVPKG 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E  D+++  E++L+   +          +F                      R
Sbjct: 248 EPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVINSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           I Y +AI+       D + P+   +   TEH  +    +F + + V    +         
Sbjct: 308 ITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI------- 360

Query: 335 GGNRAFCDRMNE 346
              +AF  RMNE
Sbjct: 361 ---KAFYMRMNE 369



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M           D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMRMNE-------DGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|157106533|ref|XP_001649366.1| lysyl-tRNA synthetase [Aedes aegypti]
 gi|108868817|gb|EAT33042.1| lysyl-tRNA synthetase [Aedes aegypti]
          Length = 588

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 96/551 (17%), Positives = 167/551 (30%), Gaps = 109/551 (19%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
            ++G +H +R  G  +IF D+R      QV+AN  +  +E   +   +      G ++  
Sbjct: 116 SVAGRIHAIRESGGKLIFYDLRGEGVKLQVMAN--AKLYESEAAFLEDTSRLRRGDIVGV 173

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +  +K+++LS      LP        +  RF+ R+LDL  +   +
Sbjct: 174 QG--YPGKTKKGELSVIPRKLKLLSPCL-HMLPHLHYGLKDKETRFRQRYLDLILNGNVR 230

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           NI   R +II+ +R  +    F+E  TP++   +        +    +      L  AP+
Sbjct: 231 NIFLVRAKIISYVRQFLDGMGFLEVETPMMNMIAGGATAKPFITHHNDLNMNLFLRIAPE 290

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y ++L   G DR ++I   FR+E                          ++   N    
Sbjct: 291 LYLKMLTVGGLDRVYEIGRQFRNEG-------------------------IDLTHN---- 321

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
                                +    Y  D  DL       ++TE  V    +       
Sbjct: 322 ---------------PEFTTCEFYMAYA-DYNDL------IDLTEKMVSGMVKSIHGSYK 359

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
           +           +G  G     D    + R      L  I      S          K L
Sbjct: 360 IK-------YHPEGPDGKEYDIDFTPPFKRISMLSSLEEILKVKFPSPESFNTAETNKFL 412

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
           + +  +                    P                    +  NC    +I D
Sbjct: 413 SDLCIKHEVE-------------CPAPRTTARLLDKLVGEF------LEENCINPTFICD 453

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
                            +P  M              +    +++L     EI +     +
Sbjct: 454 -----------------HPQIMSPLAKYHRSA----AGLTERFELFIMKKEICNAYTELN 492

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
              V  + F      K   ++           A + G+PP GG   GIDR+ M L    N
Sbjct: 493 DPAVQRERFEQQAADKAAGDDEAQMVDENFCTALEYGLPPTGGWGMGIDRLTMFLTDNNN 552

Query: 556 VREVSLFPMSQ 566
           ++EV LFP  +
Sbjct: 553 IKEVLLFPAMK 563


>gi|195565967|ref|XP_002106565.1| GD16054 [Drosophila simulans]
 gi|194203945|gb|EDX17521.1| GD16054 [Drosophila simulans]
          Length = 610

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 92/577 (15%), Positives = 176/577 (30%), Gaps = 109/577 (18%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G +     + ++G VH +R  G  +IF D+R      QV+A+  S   E      ++   
Sbjct: 137 GETLENVKLSVAGRVHAIRESGAKLIFYDLRGEGVKVQVMASAKSYKSEA--DFETDTSK 194

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++             G++ +   +I++LS      LP        +  R++ R+L
Sbjct: 195 LRRGDIIGVVG--HPGKTKKGELSVMPSEIKLLSPCL-HMLPHLHFGLKDKETRYRQRYL 251

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL   + + +N   R +II+ +R  +    F+E  TP++   +        V    +   
Sbjct: 252 DLILNNKVRENFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNDLKM 311

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              +  AP+ Y ++L+  G DR ++I                                  
Sbjct: 312 DLFMRIAPELYHKMLVVGGLDRVYEIG--------------------------------- 338

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
                       +F N      +       +    Y              +  +    +E
Sbjct: 339 -----------RQFRNEGIDLTHNPEFTTCEFYMAYA-------------DYADIMDITE 374

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
             V   + ++   Y++   P +G  G     D    + R      L            + 
Sbjct: 375 QLVSGMVKAIRGSYKIIYHP-EGPEGPEQELDFTPPFKRVSMIKTL---------EEKLQ 424

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
              P A   N   T     +L  +           P               +E  +    
Sbjct: 425 VKFPAADTFNSPETNQFLSQLCAKH----QVECPAPRTTARLLDKLVGEFIEEFCV---- 476

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
                +I                   +P  M        K +  +     +++L     E
Sbjct: 477 --NPTFI-----------------CEHPQIMSPLA----KYHSSIPGLTERFELFVAKKE 513

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRI 546
           I +     +   V  + F      K   ++           + + G+PP GG   GIDR+
Sbjct: 514 ICNAYTELNDPVVQRERFEQQASDKAAGDDEAQLVDENFCTSLEYGLPPTGGFGMGIDRL 573

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            M L  + N++EV LFP  +        + +  + +Q
Sbjct: 574 AMFLTDSNNIKEVLLFPAMKPEDANRTAAETAPAAQQ 610


>gi|212691214|ref|ZP_03299342.1| hypothetical protein BACDOR_00705 [Bacteroides dorei DSM 17855]
 gi|212666446|gb|EEB27018.1| hypothetical protein BACDOR_00705 [Bacteroides dorei DSM 17855]
          Length = 576

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 118/276 (42%), Gaps = 10/276 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +    +    V ++G +   R  G   F++++D  G  QV    D  C + 
Sbjct: 36  NAFSTDIKAEFKDDEEPRKVSVAGRMMSRRVMGKASFIELQDSKGRIQVYITRDDICPDE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + A+K+ +LS + +    V  +    
Sbjct: 96  NKELYNTVFKRLLDLGDFVGIEGFVFRTQMGEISIHAKKLTVLSKSIKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R++DL  +   K   +KR+++ +SMR    ++ ++E  TPIL + + 
Sbjct: 156 YDKFEDPELRYRQRYVDLAVNEEIKDIFIKRSKVFSSMREYFNSKGYMEVETPILQSIAG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y +  A + Y + L+  GF+  ++I   FR+E       P E
Sbjct: 216 GAAARPFITHHNALDMPLY-MRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
           F  +++ +++ + + ++   E ++  +  + +    
Sbjct: 274 FTCMEIYVAYKDYNWMMEFTEKMIEKICLDVNGTTQ 309



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 17/150 (11%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+ NG E+ +     +     L+ F
Sbjct: 378 EGTYIQPTFITDYPKEMSPLTKIHRSNPDLTERFELMVNGKELCNAYSELNDPIDQLERF 437

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  E  ++          RA + GMPP  G+  G+DR+ ML+ G   ++EV  FP 
Sbjct: 438 EEQMRLSEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFPQ 497

Query: 565 SQNFCDLLMGSPSTVSVE----QLRELGLR 590
            +         P  V+ +    +  ELG+ 
Sbjct: 498 MR---------PEKVTPKDTPAKFMELGIS 518


>gi|194336791|ref|YP_002018585.1| lysyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|238693364|sp|B4SB22|SYK_PELPB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|194309268|gb|ACF43968.1| lysyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 511

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 64/305 (20%), Positives = 121/305 (39%), Gaps = 32/305 (10%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           THS G++      +  + V ++G +  +R  G   F  ++D  G  Q+    D       
Sbjct: 49  THSSGEIIANFVEEAKTPVSVAGRIMTIRKMGKASFFHLQDSAGRIQIYMKKDEVGDATY 108

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            + +   +  I G+      +       TG+I + A+ +E+L+ +         +    E
Sbjct: 109 DTFKLLDIGDIIGI------KGFTFKTRTGEISVHAESLELLTKSLRPIPVAKEKEVDGE 162

Query: 123 ----------SIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA 171
                      +R++ R++DL  +   K   +KR+ I++ MR     + ++E  TPIL  
Sbjct: 163 KVVFDAFSDKELRYRQRYVDLIVNPEVKETFIKRSAIVSFMRNAFTGKGWLEVETPILQP 222

Query: 172 S-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F           Y L  A + Y + L+  GFD  F+ A  FR+E       
Sbjct: 223 IYGGAAARPFTTHHNALDMQLY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEGIDRFHN 281

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDD 281
           P EF Q+++ +++ + + ++  +E +        +     +           F R+   D
Sbjct: 282 P-EFTQVELYVAYKDYNWMMEMVEELFSQTALAVNKSEVTTFLGNEISLKPPFRRLSIID 340

Query: 282 AIRRY 286
           AI  Y
Sbjct: 341 AITEY 345


>gi|113475887|ref|YP_721948.1| asparaginyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110166935|gb|ABG51475.1| asparaginyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 463

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 79/385 (20%), Positives = 141/385 (36%), Gaps = 61/385 (15%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACF-EIAKSVRSE 68
           LG     + V + GWV   R      F+++ D   +   QVV NPD   + E  + + + 
Sbjct: 10  LGSGQPDAKVTIQGWVRTKRELKEFAFVEVNDGSCLANLQVVLNPDLPNYQESLQQMNTG 69

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G+++   A+         +IEL A+ I     A+    P+  +R   E +R   
Sbjct: 70  ASVEMTGILVESPAKG-------QRIELKAESITAYGDADPETYPLQKKRHSFEFLR-TI 121

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +T       R    N++        F+   TPI+TAS  EGA +    + ++ 
Sbjct: 122 AHLRGRTNTYGAVFRVRNTCANAIHQFFQERGFLWVHTPIITASDCEGAGEMFTVTNLDL 181

Query: 189 G--------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q +  +MA+     +   P FR E+  + R  
Sbjct: 182 KKIPLTEKQDIDFSQDFFGKSAFLTVSGQLEAEIMATALSNVYTFGPTFRAENSNTSRHL 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS-------------------- 271
            EF+ ++ EM+F + +  ++  E  L+ +F+    G                        
Sbjct: 242 AEFWMIEPEMAFCDLEGDMDLAEEFLKYIFKSVLEGCPEDMEFFNKRIDKTVFETADTII 301

Query: 272 -NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            N+F RI Y +A+            P+   +   +EH  +    +F K            
Sbjct: 302 NNSFERITYTEAVSLLEKADKKFDYPVDWGLDLQSEHERYLCEELFKKP----------V 351

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQ 353
           I        +AF  R+N+ A++   
Sbjct: 352 IVTDYPAKIKAFYMRLNDDAKTVRA 376



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 76/223 (34%), Gaps = 31/223 (13%)

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG--DSCFFIAGDPLKFCSFAADARNHIA 421
           D  G++       K++     E     ++  +   D   F   D +   SF    R    
Sbjct: 255 DLEGDMDLAEEFLKYIFKSVLEGCPEDMEFFNKRIDKTVFETADTIINNSF---ERITYT 311

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEK--------------KIDFAHNPFTMPQGGME 467
           + + ++     +F + +D+     +E E+                      F M      
Sbjct: 312 EAVSLLEKADKKFDYPVDWGLDLQSEHERYLCEELFKKPVIVTDYPAKIKAFYMR----- 366

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
               +D  +++A    LV    EI  G  R    +V+ +      ++KE +         
Sbjct: 367 --LNDDAKTVRAMDV-LVPKVGEIIGGSQREERLDVLERRIDEQEMNKEELW----WYLD 419

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             + G  PH G   G +R+V  + G  N+R+V  FP +    D
Sbjct: 420 LRRYGTVPHAGFGLGFERVVQFMTGMGNIRDVIPFPRAPLTVD 462


>gi|119947031|ref|YP_944711.1| lysyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|259511530|sp|A1T047|SYK_PSYIN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|119865635|gb|ABM05112.1| lysyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 509

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 61/277 (22%), Positives = 114/277 (41%), Gaps = 21/277 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK-SVRSEWVLCIDGLVMSR 80
            ++G +   R  G   F  I+D  G  Q+    D           +   +  I G     
Sbjct: 72  SIAGRMMMRRIMGKASFATIQDMGGRIQLYVTRDKLPESFYNTEFKKWDLGDIIG----- 126

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
            A+ +     T ++ +   +I IL+ A   PLP            ++ R+LDL  +   +
Sbjct: 127 -AKGVLFKTQTNELSIKVSEIRILTKALR-PLPDKFHGLSDTEACYRQRYLDLIANDNSR 184

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
                R +I+N++R  +   +F+E  TP+L +      A+ F           Y L  AP
Sbjct: 185 KTFLLRNKIVNAIRQYLNDRDFMEVETPMLQSIPGGAAAKPFETYHNALSLPMY-LRIAP 243

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L+  GF+R F+I   FR+E   +   P EF  ++   ++ +  D++N  E +LR
Sbjct: 244 ELNLKRLVVGGFERVFEINRSFRNEGVSTRHNP-EFTMIEFYQAYADYIDLMNLTEEMLR 302

Query: 259 GVFEEFSNGNTVSN---------NFLRICYDDAIRRY 286
            + E     + V+           F+R+   +++ +Y
Sbjct: 303 SIAENVLGSSIVNYGDQVFDFGAAFIRMTMKESVLQY 339



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 7/129 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           +E   E K +       T     +  L + ND       +++    G E+A+G    + S
Sbjct: 379 FEETTEHKLLQPTF--ITAYPAEVSPLARRNDQDPSVTDRFEFFVGGRELANGFSELNDS 436

Query: 502 EVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           +   + F +    KE  ++           A + G+PP  G   GIDR+VML   +  +R
Sbjct: 437 QDQAERFMDQVAQKESGDDEAMFYDADYITALEHGLPPTAGEGIGIDRLVMLFTDSHTIR 496

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 497 DVLLFPHMR 505


>gi|223934542|ref|ZP_03626463.1| lysyl-tRNA synthetase [bacterium Ellin514]
 gi|223897005|gb|EEF63445.1| lysyl-tRNA synthetase [bacterium Ellin514]
          Length = 486

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 108/266 (40%), Gaps = 16/266 (6%)

Query: 6   THSCGDLGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEI 61
           T +      + V    V L+G +   R  G  IF DI+D  G  QV A   +     F+I
Sbjct: 33  TETAAQARANYVENREVALAGRITAYREMGKSIFFDIKDQSGRIQVYAQKAALGDEQFDI 92

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K +     L + G++             TG+I +      I+  A   P P        
Sbjct: 93  FKLLDMGDFLGVKGVL---------FTTKTGEISVKLASFTIIGKALR-PPPEKWHGLVD 142

Query: 122 ESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
             IR++ R+LDL  +  + K  + R+ ++  +R    +  ++E  TP++       A   
Sbjct: 143 TEIRYRQRYLDLMSNDEVKKTFLLRSAVVREIRNFFHSRGYVEVETPMMQNIPGGAAAAP 202

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            V      G  + L  A + Y + L+  G D+ F+I   FR+E       P EF  L+  
Sbjct: 203 FVTHHNALGCNFYLRIAIELYHKRLLVGGIDKMFEIGKNFRNEGLSRKHNP-EFTMLEAY 261

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSN 266
            ++ + + ++  +++++  V E    
Sbjct: 262 QAYGDYETMMELVQSMIVHVAESVLG 287



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 6/113 (5%)

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
             H P  +    +  L   D  S++   ++   NG EIA      + +    +   +   
Sbjct: 377 VTHLPKELVP--LAKLSPEDPTSVEV--FECCINGQEIAPAYSEQNDAVEQRERLEHQAG 432

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            ++   +       A + GMPP GG+  GIDR+ M+LLG +++R+V LFP  +
Sbjct: 433 GEQQKLDE--DFLIALEHGMPPAGGMGMGIDRLCMMLLGQESIRDVILFPQMK 483


>gi|116490302|ref|YP_809846.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni PSU-1]
 gi|116091027|gb|ABJ56181.1| Lysyl-tRNA synthetase (class II) [Oenococcus oeni PSU-1]
          Length = 496

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 76/307 (24%), Positives = 125/307 (40%), Gaps = 30/307 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCIDGL 76
             V ++G +   R  G IIF DIRD  G  Q+ A  D     + + +      +L   G 
Sbjct: 62  KHVIIAGRIMAKRGAGKIIFADIRDVSGTVQIYARRDDLADNYALIRRADLGDILGFSGT 121

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           VM   A         G+  +   K+  LS A   PLP           R++ R+LDL  +
Sbjct: 122 VMKTDA---------GETTILIDKLTWLSKALR-PLPDKYHGLTDIDTRYRKRYLDLISN 171

Query: 137 TLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-RDFLVPSRVNQGSFYAL 194
                  +KR++I+ ++R  M +  F+E  TPIL  S+   A R F+          Y L
Sbjct: 172 PKSFEVFIKRSKIVKAIRNYMDSIGFLEVETPILQNSAGGAAARPFVTHHNALDIDMY-L 230

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + Y + L+  G +R ++I   FR+E   +   P EF  L+   ++ +  D++   E
Sbjct: 231 RIATELYLKRLIVGGMERVYEIGRIFRNEGMDTRHNP-EFTTLESYGAYWDLSDVMIETE 289

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
           N++R   +  +              +D +  Y   K DL       ++TE         F
Sbjct: 290 NIIRAAAKSIN--------------EDGVIDYQGHKIDLSKDFAKRSMTELIKEKTGIDF 335

Query: 315 SKILSVN 321
            K + + 
Sbjct: 336 DKKIDLE 342



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 4/123 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           EK +      +  P       K  D       +++L   G E  +     +      Q F
Sbjct: 374 EKSLIEPTFVYHFPLEVSPLAKKEDNNPDFVQRFELYIAGGEYGNAFTELNDPIDQRQRF 433

Query: 509 SNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +E      E+       A + GM P GG+  GIDR+ MLL    +VR+V LFP 
Sbjct: 434 EAQAAERENGNDEAESIDEDYIEALEHGMAPTGGLGIGIDRLTMLLTNQTSVRDVLLFPT 493

Query: 565 SQN 567
            +N
Sbjct: 494 MRN 496


>gi|88603737|ref|YP_503915.1| lysyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|121725410|sp|Q2FSN8|SYK_METHJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|88189199|gb|ABD42196.1| lysyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 505

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 64/294 (21%), Positives = 120/294 (40%), Gaps = 18/294 (6%)

Query: 1   MHRY---RTHSCGDLGV--SDVG-----SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           M+ +   R+H+  ++    S  G       V  +G ++ VR HG   F D+RD  G  Q+
Sbjct: 27  MYPHEFRRSHTIAEIRAKYSQAGHDPSSDQVITAGRLYGVRDHGKTFFADLRDETGRIQL 86

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D+      +  +S       G ++  +       +  G+I +    I +L+     
Sbjct: 87  YIRKDALPEGKFQMFKSS---IERGDIIGVTGRIFKTKV--GEISIFVDDIILLTKTL-C 140

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
            LP           R++ R+LDL  +   +   + R+RII+ +R  +  + F+E  TP L
Sbjct: 141 SLPEKFHGLTNLEKRYRQRYLDLIVNEESRETFRTRSRIISLLRNYLTGQGFLEFETPTL 200

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                              G    L  AP+ Y + L+  GF++ F++A  FR+ED  +  
Sbjct: 201 QPLYGGANARPFTTFHNFLGQKLYLRIAPELYLKRLVVGGFEKVFEVAKNFRNEDIDTSH 260

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
            P EF  +++  ++ +  D++   E ++  +  E +    V+     I Y    
Sbjct: 261 NP-EFSMVEIYQAYADYTDMMKLTEGIISSIVHEVTGSYEVAFEENTISYKAPW 313



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 25/146 (17%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           ++     +  +I DFP      E   +  +H                        +++L 
Sbjct: 367 LVEDKLIQPTFITDFPV-----ENSPLAKSHR----------------EKEGFVERFELF 405

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNV----GISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             G E+A+G    +     ++ F        +  E  +        A   GMPP GG+  
Sbjct: 406 IAGMELANGFSELNDPLDQMERFEAQEEKRRLGDEEAQMHDYDFVNALGYGMPPTGGVGI 465

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           GIDR+VML+ G  +++EV LFP  + 
Sbjct: 466 GIDRLVMLITGNTSIKEVILFPSMKR 491


>gi|261880057|ref|ZP_06006484.1| asparagine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270333298|gb|EFA44084.1| asparagine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 465

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 61/292 (20%), Positives = 119/292 (40%), Gaps = 26/292 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC 58
           M   RT     L  +D G  + + GWV   R    + F+ + D   I   Q+V NP+S  
Sbjct: 1   MIMKRTKVIDALRSTDFGQDITVKGWVRSHRSSKAVDFIALNDGSTIKNIQIVVNPESMD 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E  KS+ +   +   G ++    +  +        E+ A++IEI  +      P+  + 
Sbjct: 61  DEELKSITTGACIRATGTLVESQGKGQDC-------EVQAKEIEIYGLC-PGDYPMQKKG 112

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E +R +Y  + LR +T       R  +  ++        F    +PI+TAS  EGA 
Sbjct: 113 QSFEYMR-QYGHMRLRTNTFGAVFRIRHNMAIAIHKYFHEHGFYYFHSPIITASDAEGAG 171

Query: 179 DFLVPSRVN------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDE 223
           +    + ++               F+    +     Q +  L A+     +   P FR E
Sbjct: 172 EMFQVTTLDLDRVAKSGKVEYDKDFFGKKTSLTVSGQLEGELGATALGAIYTFGPTFRAE 231

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +  + R   EF+ ++ E++F++Q ++++  E+ ++       +      +FL
Sbjct: 232 NSNTPRHLAEFWMIEPEVAFMDQKELMDLEEDFIKYCVRWALDNCRDDLDFL 283



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 14/118 (11%)

Query: 451 KIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                   F M +    ++++G D+         L     EI  G +R    + ++    
Sbjct: 357 DYPAEIKAFYMKKNEDGKTMQGTDV---------LFPRIGEIIGGSVREENLDKLVNEIK 407

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             G+        +       + G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 408 ARGMESHA----YDWYLDTRKYGSCPHAGFGLGFERLILFVTGMQNIRDVIPFPRTPK 461


>gi|283768797|ref|ZP_06341708.1| lysine--tRNA ligase [Bulleidia extructa W1219]
 gi|283104583|gb|EFC05956.1| lysine--tRNA ligase [Bulleidia extructa W1219]
          Length = 646

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 110/269 (40%), Gaps = 11/269 (4%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +   R  G + F+ + D  G  Q+V N      EI +  +   +  I G+     
Sbjct: 66  TVAGRIMMKRRMGKMGFISLLDKTGRIQIVMNQRIIGEEIYELFKKSDLGDIIGV----- 120

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
            +       TG++ + A +   L+ A   PLP        +  R++ R+LDL  +    K
Sbjct: 121 -KGTIMKTQTGELSIEAHEYTHLTKALR-PLPDKFHGLQDKEERYRRRYLDLITNDESRK 178

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQ 199
             + R +II+++R  M ++ +IE  TP+L    +   AR F+         FY L  A +
Sbjct: 179 VAILRPKIISAIRHYMDSQGYIEVETPVLQPLLTGASARPFITHHNALDRDFY-LRIATE 237

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+  G +R ++I   FR+E       P EF  ++   ++ +   +++  E +   
Sbjct: 238 LPLKRLIVGGLERVYEIGRIFRNEGMDLKHNP-EFTTMEAYCAYSDMQGMMDLTEGLYET 296

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           V  E             I      +++  
Sbjct: 297 VAMEVFGKTDFEFMGKTISLKAPFKKWNM 325



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 6/129 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   E K            +    + KG D       +++L   G E+ +     +  
Sbjct: 371 FFEAFCENKIEQPTFIWGHPIEVSPLAKKGKDPR--FTERFELSIMGIEMNNAFSELNDP 428

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               Q F +   +KE  +            A + G+PP GGI  GIDR VMLL G  ++R
Sbjct: 429 IDQKQRFLDQLAAKEAGDEEASEMDQDYVEALEYGLPPTGGIGFGIDRFVMLLTGNDSIR 488

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 489 DVLLFPTMK 497


>gi|23099214|ref|NP_692680.1| asparaginyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|38258374|sp|Q8EQE2|SYN_OCEIH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|22777442|dbj|BAC13715.1| asparagine-tRNA ligase [Oceanobacillus iheyensis HTE831]
          Length = 430

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 74/322 (22%), Positives = 124/322 (38%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
              +   V +  W+   R  G I FL +RD  G      V ++     F  +K++  E  
Sbjct: 9   PQYIEQEVTIGAWLSNKRSSGKIAFLQLRDGTGFMQGIVVKSDVSEDVFSTSKNITQESS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G ++  +             E+    +E++  A + P+     +E+       +R 
Sbjct: 69  LYVTGKIVEDTRSDF-------GYEMQVSNVEVIHEANDYPITP---KEHGTEFLMDHRH 118

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II S       E F++   PILT SS EG  +       ++ +
Sbjct: 119 LWLRSKKQHAVMKIRNEIIRSTYEYFNKEGFVKVDPPILTGSSAEGTTELFHTKYFDEEA 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L
Sbjct: 179 Y--LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEHEESL 235

Query: 251 NTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRY---GTDKPD 292
              EN +  + +               + S    +   F RI YD+AI      G D  +
Sbjct: 236 QIQENYVSHIVQSVLTNCKLELSVLDRDLSKLEKIKAPFPRISYDEAIDMLKEKGFDDIE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
                   + T      +  VF
Sbjct: 296 WGEDFGAPHETAIAESYDMPVF 317



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 27/152 (17%)

Query: 418 NHIAQELGIINCNCFE-----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               ++ G  +            +I ++P     ++ K      +P        + +   
Sbjct: 294 IEWGEDFGAPHETAIAESYDMPVFITNYP-----KDIKAFYMKPHP-----DRSDVVLCA 343

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DL++ + +         EI  G  R    E+M Q +   G++    +          + G
Sbjct: 344 DLIAPEGYG--------EIIGGSQRIDDLELMEQRYEEHGLTGPAYQ----WYLELRKYG 391

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             PH G   G++R V  L G ++VRE   FP 
Sbjct: 392 SVPHSGFGLGLERTVAWLSGVEHVRETIPFPR 423


>gi|198467359|ref|XP_001354371.2| GA11433 [Drosophila pseudoobscura pseudoobscura]
 gi|198149207|gb|EAL31424.2| GA11433 [Drosophila pseudoobscura pseudoobscura]
          Length = 584

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 93/552 (16%), Positives = 171/552 (30%), Gaps = 111/552 (20%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
            ++G VH +R  G  +IF D+R      QV+A+  S   E A    ++      G ++  
Sbjct: 113 SVAGRVHAIRESGAKLIFYDLRGEGVKLQVMASAKSYQPETA--FETDTAKLRRGDIIGV 170

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLH 139
                      G++ +   +I++LS      LP        +  R++ R+LDL   + + 
Sbjct: 171 KG--HPGKTKKGELSIMPTEIKLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNNKVR 227

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
           +N   R +II+ +R  +    F+E  TP++   +    A+ F+      +   + +  AP
Sbjct: 228 ENFQIRAKIISYVRQFLDRLGFLEIETPMMNMVAGGATAKPFVTHHNELKMDLF-MRIAP 286

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I                                          
Sbjct: 287 ELYHKMLVVGGLDRVYEIG----------------------------------------- 305

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
               +F N      +       +    Y              +  +    +E  +   + 
Sbjct: 306 ---RQFRNEGIDLTHNPEFTTCEFYMAYA-------------DYADVMDITEQLISGMVK 349

Query: 319 SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKH 378
           S+   Y++   P +G  G     D    + R      L            +    P A+ 
Sbjct: 350 SIRGSYKIKYHP-EGPEGPEQELDFTPPFKRVSMIKTL---------EEKLKVQFPSAET 399

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
            N   T     +L ++           P                    I   C    +I 
Sbjct: 400 FNTRATTDFLSQLCVKH----QVECPAPRTTARLLDKLVGEF------IEEECINPTFI- 448

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
                             +P  M                   +++L     EI +     
Sbjct: 449 ----------------CEHPQIMSPLAKYHRSAP----GLTERFELFVAKKEICNAYTEL 488

Query: 499 HMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +   V  + F      K   ++           A + G+PP GG   GIDR+ M L  + 
Sbjct: 489 NDPVVQRERFEQQASDKAAGDDEAQMVDENFCTALEYGLPPTGGFGMGIDRLTMFLTDSN 548

Query: 555 NVREVSLFPMSQ 566
           N++EV LFP  +
Sbjct: 549 NIKEVLLFPAMK 560


>gi|313884406|ref|ZP_07818167.1| lysine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620190|gb|EFR31618.1| lysine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 504

 Score =  194 bits (492), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 64/358 (17%), Positives = 132/358 (36%), Gaps = 35/358 (9%)

Query: 5   RTHSCGDLGVS-----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           R+H   +L  S           +V   V ++G +   R  G   F  I+D  G  Q+   
Sbjct: 42  RSHLSQELISSYDQYDKEYFENEVKIQVAIAGRLVSKRGKGKAGFAHIQDMAGRIQIYVR 101

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D+   +     +   +  I G+      +       TG++ + A++   L+ A   PLP
Sbjct: 102 KDAIGEDRYLWFKQADLGDIVGV------KGYVFKTNTGELSVHAEEFYPLTKALR-PLP 154

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS 172
                      R++ R+LDL  +   +     R+ II  +R  +    ++E  TP+L   
Sbjct: 155 DKFHGLTNVEQRYRQRYLDLISNDDSRQRFINRSMIIRQIRRYLDDLGYLEVETPVLHNI 214

Query: 173 SPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    A+ F+          Y L  A + + + L+  GF++ +++   FR+E   +   P
Sbjct: 215 AGGATAKPFITHHNALDMELY-LRIATELHLKRLVVGGFEKVYELGRVFRNEGIDTTHNP 273

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF  +++  ++    D ++ +EN++R V +E      +     +I  +    R      
Sbjct: 274 -EFTTIEIYTAYSVYTDCMDLVENLIRTVAKEAIGQTVIDYAGQKIDLETPWAR------ 326

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEW 347
                  M ++ + +   +F             +   +P             +   E+
Sbjct: 327 -----RHMVDMIKEYTGVDFWQEMTFEEAKALAKEHHVPLNDHDNTVGHVINNFFEEY 379



 Score = 90.9 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   E+K I      +  P       + ND       +++L   G E A+        
Sbjct: 375 FFEEYCEDKCIQPTFV-YGHPVEVSPLARKNDEDPRFTDRFELFIVGNEYANAFTELTDP 433

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      K+   +           A + GMPP GGI  G+DR+ MLL  A+++R
Sbjct: 434 IDQRERFEAQMAEKDAGNDEAHPVDDDFLEALEYGMPPTGGIGIGVDRLAMLLTDAQSIR 493

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 494 DVLLFP 499


>gi|296490538|gb|DAA32651.1| aspartyl-tRNA synthetase, cytoplasmic [Bos taurus]
          Length = 501

 Score =  194 bits (492), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 149/381 (39%), Gaps = 47/381 (12%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKS 64
             DL V   G  V +   VH  R  G   FL +R        +  V  +      + A +
Sbjct: 48  ISDLTVQKAGEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAAN 107

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE-- 122
           +  E ++ ++G+V  R       +     +EL  QKI ++S AE        +   PE  
Sbjct: 108 INKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISSAEPRLPLQLDDAVRPEVE 165

Query: 123 -----------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
                        R   R +DLR  T       ++ I +  R  +  + F+E  TP + +
Sbjct: 166 GEEDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLTNKGFVEIQTPKIIS 225

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R  
Sbjct: 226 AASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHL 283

Query: 232 GEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------ 274
            EF  LD+EM+F        ++I +T+  + +G+ + F       N       F      
Sbjct: 284 TEFVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPT 343

Query: 275 LRICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYE 325
           LR+ Y +A+           D+ DL  P    +  + +    ++F +  K  L+V P Y 
Sbjct: 344 LRLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFYT 403

Query: 326 VWAIPAKGGGGNRAFCDRMNE 346
           +          +     R  E
Sbjct: 404 MPDPRNPKQSNSYDMFMRGEE 424



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 345 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYD----TDFYILD------KY 394

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 395 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 445

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 446 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501


>gi|325294994|ref|YP_004281508.1| Lysyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065442|gb|ADY73449.1| Lysyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 512

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 9/250 (3%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
               L+G +  +R  G   F  I+D     Q     D    E    +     L   G ++
Sbjct: 59  EEFSLAGRIVSMRVMGKAAFFHIQDGTEKIQCYVRRDLVGEEFYNKIFK--KLIDIGDIV 116

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               +       TG++ L   +I +L+ +   PLP           R++ R+LDL  +  
Sbjct: 117 GVKGKLFRTR--TGELTLETFQITLLTKSLR-PLPEKWHGLTDVEKRYRQRYLDLIVNPQ 173

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
            + I + RT+II  +R  + ++ F+E  TPIL   +S   A+ F+          Y L  
Sbjct: 174 VREIFRTRTKIIKKLREFLDSKGFMEVETPILQPIASGAAAKPFITHYNALDIDVY-LRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+R +++   FR+E   +   P EF  ++  M++ + +D++   E +
Sbjct: 233 APELYLKRLLVGGFERVYELGKNFRNEGISTRHNP-EFTMVEFYMAYADYNDLMELTEEL 291

Query: 257 LRGVFEEFSN 266
              + +E   
Sbjct: 292 FEYLLDEIFG 301



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 51/142 (35%), Gaps = 25/142 (17%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           +I     +  +++DFP             A +P    + G   L           +++L 
Sbjct: 375 LIEPELIQPTFVIDFP------------KAISPLAKEKRGNPEL---------VERFELF 413

Query: 486 CNGFEIASGGIRNHMSEVML----QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             G EIA+     +  E       Q         +           A + GMPP  G   
Sbjct: 414 IFGREIANAYTELNNPEEQEARFRQQLEEKAKGDDEAMEYDADFITALEYGMPPTAGEGI 473

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           GIDR+VML     ++REV LFP
Sbjct: 474 GIDRLVMLFTDKDSIREVLLFP 495


>gi|119112485|ref|XP_317634.3| AGAP007858-PA [Anopheles gambiae str. PEST]
 gi|116123376|gb|EAA12164.3| AGAP007858-PA [Anopheles gambiae str. PEST]
          Length = 572

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 99/552 (17%), Positives = 170/552 (30%), Gaps = 109/552 (19%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G VH +R  G  +IF D+R      Q++A+  +A ++  +    E      G ++ 
Sbjct: 111 VSVAGRVHAIRESGDKLIFFDLRGEGQKLQIMAS--AAGYQNEEQFYDETSRLRRGDIIG 168

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTL 138
            +          G++ + A++I++L+      LP        +  R++ R+LDL   + +
Sbjct: 169 VTGAP--GKTKKGELSVMAKQIQLLAPCL-HMLPHLHYGLKDKETRYRQRYLDLMLNNDV 225

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
               V R RII+ +R  +    F+E  TP++   +        V    +      L  AP
Sbjct: 226 RSIFVTRARIISFIRRFLDGAGFLEVETPMMNMIAGGATAKPFVTHHNDLNMDLFLRIAP 285

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L   G DR ++                                           
Sbjct: 286 ELYLKMLTVGGLDRVYE------------------------------------------- 302

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
            +  +F N      +       +    Y  D  DL        +TE  + S         
Sbjct: 303 -IGRQFRNEGMDVTHNPEFTTCEFYMAYA-DYNDL------MEITEQLLSSLVYSVHGSF 354

Query: 319 SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKH 378
            V           +G GG+    D    + R         I         ++   P A  
Sbjct: 355 KVK-------YHPEGHGGDEVEIDFTPPFKR---------ISMIDTLEDVLSVKFPPADQ 398

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
           L+          L  Q           P                    +  NC    +I 
Sbjct: 399 LDTPEAAKFLEELCQQRN----IDCQPPRTTARLLDKFVGEF------LEGNCHNPTFIC 448

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D                 +P  M              S    +++L   G EI +     
Sbjct: 449 D-----------------HPQIMSPLAKYHR----TRSGLTERFELFVMGKEICNAYTEL 487

Query: 499 HMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +   V  Q F      K    +  +        A + G+PP GG   GIDR+ M L    
Sbjct: 488 NDPAVQRQRFKQQAAEKAAGNDEAQLVDENFCTALEYGLPPTGGWGLGIDRLAMFLTDCT 547

Query: 555 NVREVSLFPMSQ 566
           +++EV LFP  +
Sbjct: 548 SIKEVLLFPAMK 559


>gi|325968136|ref|YP_004244328.1| aspartyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323707339|gb|ADY00826.1| aspartyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 433

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 92/386 (23%), Positives = 164/386 (42%), Gaps = 46/386 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEI 61
           +TH   DL     G  V L+GWV  +R  G I F+ IRD  G  Q+         + + +
Sbjct: 6   KTHWTKDLTPELDGKEVILTGWVWDIRDLGNIKFILIRDREGFIQLTIKRGVAPDSVWSM 65

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             S+  E  + + G+V +       + I+   IE+   +I++++ ++ LP+ ++G  E  
Sbjct: 66  IPSLNREDAIAVKGVVRA-------SKIVKAGIEVFPSEIQVIAKSKALPIDIWGSVETD 118

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              R K+R +DL+R          +  + ++R  +   +FIE  TP +  +S EG  +  
Sbjct: 119 LDTRLKFRSIDLKRPFNLLIFRVESETVRAIRETLYGRDFIEVFTPKIIVTSTEGGAELF 178

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + ++ A  Q+PQ YK+ L AS  +R F+IAP +R E   ++    EF  +D+E 
Sbjct: 179 TVQYFERIAYLA--QSPQLYKEELTAS-LERIFEIAPAYRAEKHNTNYHLNEFISVDIEE 235

Query: 242 SFVEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIR----- 284
           +F +  D++  +E+V+  V++  S                    F +I YD+A+      
Sbjct: 236 AFADYMDVMEILEDVIVNVYDRVSRLYGNELAKYGIEVKVPKRPFRKITYDEALDILSKR 295

Query: 285 ----RYGTDKPDLRNPIIMHNVTE-----HFVHSEFRVFSKILSVNPGYEVWAIPAKGG- 334
                +G D P     I+   + E     HF       ++K L  +P           G 
Sbjct: 296 GLRINWGEDVPKNGMEILSEEIVEPFFIIHFPTDLRAFYTKPLDSDPKISESFDLVIDGL 355

Query: 335 ----GGNRAFCDRMNEWARSQGQPGL 356
               G +R       +   +  + GL
Sbjct: 356 EIASGSSRIHIK--EQLMDALKKKGL 379



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 9/153 (5%)

Query: 422 QELGIINCNCFEFCWIMDFP---FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           + L I++       W  D P       +EE  +  F  +  T  +        +D     
Sbjct: 287 EALDILSKRGLRINWGEDVPKNGMEILSEEIVEPFFIIHFPTDLRAFYTKPLDSDPK--I 344

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  +DLV +G EIASG  R H+ E ++ A    G++       F      +  GMPPH G
Sbjct: 345 SESFDLVIDGLEIASGSSRIHIKEQLMDALKKKGLNP----ESFENHLMIYDYGMPPHAG 400

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
              G+ R++M+LL   N+REV L+P  +   + 
Sbjct: 401 WGMGLYRLLMVLLKRSNIREVVLYPRDRYRLEP 433


>gi|227510345|ref|ZP_03940394.1| asparaginyl-tRNA synthetase [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227189997|gb|EEI70064.1| asparaginyl-tRNA synthetase [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 426

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 78/335 (23%), Positives = 137/335 (40%), Gaps = 32/335 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCI 73
           V   V++  W+   R  G I FL +RD         V  N     FE+AK V+ E  + I
Sbjct: 8   VNEKVKIGVWLTNKRSSGKIAFLQLRDGTAYFQGVVVKNNVSEETFELAKEVKQETSMWI 67

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++   +             E+  + IE++S + E P+     +E+       +R L L
Sbjct: 68  TGIIHEDNRSHF-------GYEIEVESIEVVSESHEYPITP---KEHGVDFLMDHRHLWL 117

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  +I +       E FI+   PILT S+PEG  D    +  ++ ++  
Sbjct: 118 RSSRPHAVMRIRNEVIKATYDFFNDEGFIKIDAPILTGSAPEGTTDLFHTTYFDKDAY-- 175

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L+  
Sbjct: 176 LSQSGQLY-EEAGAEAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLDIQ 234

Query: 254 ENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRRYGTDKPDLRNPI 297
           E  +  + +   +   +                   + RI YD+AI     +  DL   +
Sbjct: 235 ERYIAYLVQRVIDNCQMELKTLGRDIETLKKYTILPYPRISYDEAIDLLKKNDFDLDWGV 294

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
              +  E F+  +F     +L+     + + +   
Sbjct: 295 DFGSPEETFLADQFDQPVFVLNYPKAIKPFYMKPH 329



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 51/156 (32%), Gaps = 33/156 (21%)

Query: 425 GIINCNCFEFCWIMDF--------------PFYEWNEEEKKIDFAHNPFTMPQGGMES-- 468
            ++  N F+  W +DF              P +  N        A  PF M         
Sbjct: 281 DLLKKNDFDLDWGVDFGSPEETFLADQFDQPVFVLN-----YPKAIKPFYMKPHPTRDDV 335

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +   DLL+ + +         EI  G  R    + +       G+  +     +      
Sbjct: 336 VICADLLAPEGYG--------EIIGGSERAVDYDYLYDQIVKAGLDPKE----YSWYLDL 383

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            + G  PH G   G++R +  + G  +VRE   FP 
Sbjct: 384 RKYGSVPHSGFGLGLERALTWITGEDHVREAIAFPR 419


>gi|229579863|ref|YP_002838262.1| aspartyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228010578|gb|ACP46340.1| aspartyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
          Length = 429

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 84/303 (27%), Positives = 151/303 (49%), Gaps = 22/303 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            +RTH   +L     G+ V+++GWVH +R  GG +F+ +RD  GI Q+V    ++ ++  
Sbjct: 1   MFRTHLVSELNPKLDGAEVKVAGWVHNIRNLGGKVFILLRDKSGIGQIVVEKGNSAYDKI 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYP 121
            ++  E  L ++G+V +              IE+ A+ +EILS A+  LPL V G+ +  
Sbjct: 61  MNIGLESTLVVNGIVKADPR-------APNGIEVHAKDVEILSYAKSPLPLDVTGKVKAD 113

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              R + R LDLRR  +   +  ++  + S R  +    F+E  TP + AS+ EG     
Sbjct: 114 IDTRLRERLLDLRRLEMQAVLKIQSVAVKSFRETLYKYGFVEVFTPKIIASATEGGAQLF 173

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + +F A  Q+PQ YK+ L+A   +R F+IAP +R E+  +     EF  +D+EM
Sbjct: 174 PVLYFGKEAFLA--QSPQLYKE-LLAGAIERVFEIAPAWRAEESDTPYHLSEFISMDVEM 230

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F + +DI+  +E ++  +  +            R   ++ ++      PD++ P+   +
Sbjct: 231 AFADYNDIMALIEQIIYNMINDV-----------RRECENELKNLNYTPPDVKIPMKKIS 279

Query: 302 VTE 304
            +E
Sbjct: 280 YSE 282



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 71/196 (36%), Gaps = 33/196 (16%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA--DARNHIAQELGIINCNCFEFC 435
           +    + +    ++   +        G  +KF       + R        + +    +  
Sbjct: 265 NYTPPDVKIPMKKISYSEAIEILKSKGVNIKFGDDIGTPELRV-------LYSELKEDLY 317

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           ++ D+P+               PF   Q               +  +DL+    EI SG 
Sbjct: 318 FVTDWPWLS------------RPFYTKQKKD--------NPQLSESFDLIFRWLEIVSGS 357

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            RNH+ EV+  +    G++       F    + F  GMPPH G   G+ R++++L G ++
Sbjct: 358 SRNHVKEVLENSLKVRGLNP----ESFEFFLKWFDYGMPPHAGFGMGLARVMLMLTGLQS 413

Query: 556 VREVSLFPMSQNFCDL 571
           V+EV  FP  +     
Sbjct: 414 VKEVVPFPRDKKRLTP 429


>gi|223982711|ref|ZP_03632941.1| hypothetical protein HOLDEFILI_00215 [Holdemania filiformis DSM
           12042]
 gi|223965307|gb|EEF69589.1| hypothetical protein HOLDEFILI_00215 [Holdemania filiformis DSM
           12042]
          Length = 496

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 63/296 (21%), Positives = 118/296 (39%), Gaps = 21/296 (7%)

Query: 5   RTHSCGDLGVS--DVGSFV--------RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH    L     +V             ++G +   R  G + F+ ++D  G  QVV N 
Sbjct: 33  RTHRSAQLREEYGEVSQEELEEKKIPCAIAGRIMTKRRMGKLGFMHLQDRDGQIQVVVNK 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                E+ +  ++  +  I G+      E       TG++ + A+K+E L+ A   PLP 
Sbjct: 93  GVVGEEVYELFKAADLGDIVGI------EGYVCKTNTGELSVKAEKLEHLTKALR-PLPE 145

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS- 172
                     RF+ R++DL  +    K  + R +II +++  +  +  +E  TP+L    
Sbjct: 146 KFHGLQDVEERFRRRYVDLIMNEDSRKIAMLRPKIIRAVQHYLDGQGLMEVETPVLQPIL 205

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+         FY L  A +   + L+  G +  ++I   FR+E       P 
Sbjct: 206 GGAAARPFVTHHNTLDMDFY-LRIATELPLKRLIVGGLEGVYEIGRLFRNEGMDPKHNP- 263

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           EF  ++  +++ + + ++   E +   V  E       +    +I      +R+  
Sbjct: 264 EFTTVEAYVAYSDIEGMMALNEGLFESVAMEVFGKTDFTLGDKQISLKAPYKRWHM 319



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I      +  P       + N        +++L+  G E ++     +  
Sbjct: 365 FFEQFCEEK-ITQPTFVYGHPVEISPLARKNAKDPRFTDRFELLIYGTEYSNAFSELNDP 423

Query: 502 EVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               Q F      KE               A + G+PP GGI  GIDR VMLL G +++R
Sbjct: 424 IDQRQRFEEQLKLKEMGDAEASEMDIDYVEALEYGLPPTGGIGIGIDRFVMLLTGQESIR 483

Query: 558 EVSLFPMSQNF 568
           EV LFP  +N 
Sbjct: 484 EVLLFPHMKNR 494


>gi|170290898|ref|YP_001737714.1| asparaginyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170174978|gb|ACB08031.1| asparaginyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 432

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 66/324 (20%), Positives = 131/324 (40%), Gaps = 29/324 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           +TH   +L   + G  VRL+GWV R    GGI+F+ +RD  G  QVV    +   +   +
Sbjct: 7   KTHYIAELRGLEEGENVRLAGWVQRKSELGGIVFIRMRDATGSVQVVLREGNLSEQELTA 66

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            R    E  + ++G +              G +E+ A K  ++  +++ P+         
Sbjct: 67  ARGAGIEASIIVEGSLRRDPR-------APGGLEVIASKFILVGDSKDFPIKPG----VG 115

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E      R L +R   +   ++ R  ++ +     +   F+    P    ++ EG     
Sbjct: 116 EEFLLDNRHLHIRTTRMRNALMIRMEVMRATEEWFVNNGFVRVEAPTFVGAAVEGGATLF 175

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + ++  L Q+ Q Y +  + S F+  + I P FR E  R+ R   EF+  + EM
Sbjct: 176 EVPYFGKKAY--LTQSSQFYLEAAIFS-FENVYTIQPSFRAEKSRTRRHLTEFWHAEAEM 232

Query: 242 SFVEQDDILNTMENVLRGVFEEFSN------------GNTVSNNFLRICYDDAIRRYGTD 289
           ++ + + +++ +E++++ + E+                  +   F RI YD+A+      
Sbjct: 233 AWADLNGMMDVVESLVKYIVEKVVERASDKLEALGRRMEAIEGRFPRITYDEALELAKRK 292

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRV 313
             ++          E  +  EF +
Sbjct: 293 GAEIEWGEDFGTEVERLISLEFDL 316



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 73/215 (33%), Gaps = 35/215 (16%)

Query: 364 DESGNVAGMGPVAKHLNI-------VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           D +G +  +  + K++            EA+  R++  +G        + L+       A
Sbjct: 236 DLNGMMDVVESLVKYIVEKVVERASDKLEALGRRMEAIEGRFPRITYDEALELAKRKG-A 294

Query: 417 RNHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
                ++ G     +I+       ++  +P        KK    ++         E +  
Sbjct: 295 EIEWGEDFGTEVERLISLEFDLPVFVTHYP--------KKAKAFYHK--QDPKRPEVVLC 344

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            DLL+ +           EI  GG R      ++      G++ E  +          + 
Sbjct: 345 ADLLAPEGIG--------EIVGGGQRIESENELISRIVEEGLNPEDYK----WYLDLRRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G  PH G   GI+R +  + G  ++R+   FP + 
Sbjct: 393 GSVPHSGFGLGIERTIRWIAGLPHIRDAIPFPRTP 427


>gi|221068672|ref|ZP_03544777.1| lysyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220713695|gb|EED69063.1| lysyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 514

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 65/307 (21%), Positives = 125/307 (40%), Gaps = 20/307 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            G  V ++G +   R  G   F  ++D  G  Q     D+   E+    +   +    G 
Sbjct: 72  AGVAVSVAGRMMLKRVMGKASFATVQDATGRIQAYVTRDAVGEEVYADFKKWDL----GD 127

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +++   + +     TG++ + A KI +L+ +   P+P           + + R++DL  D
Sbjct: 128 IIAVEGQLM--KTKTGELSIKAAKIRLLTKSLR-PMPDKFHGMADLEQKVRQRYVDLMTD 184

Query: 137 TL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
               K  V R++ +  +R  M+   F+E  TP+L        A+ F+          Y L
Sbjct: 185 EEARKRFVARSKAVAGIRDFMVEHGFLEVETPMLHPIPGGANAKPFITHHNALDQEMY-L 243

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D+++  E
Sbjct: 244 RIAPELYLKRLIVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYQDLMDYTE 302

Query: 255 NVLRGVFEEFSN---------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            ++R    +               ++  F R+   +AI +Y     ++ N   + N  + 
Sbjct: 303 KLIRDAAIKAVGTLELSYGGKPVDLAKPFERLTIPEAIVKYTEAGDNVANREWLTNALKK 362

Query: 306 FVHSEFR 312
               E +
Sbjct: 363 LGMKEDK 369



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           ++E   EEK  +     F M      S   + ND       +++L   G E  +G    +
Sbjct: 384 YFEEVVEEKLWNPT---FIMEHPTEISPLARANDERPEVTERFELYITGREFGNGFSELN 440

Query: 500 MSEVMLQAFSNVGISKEVVEN---RFGG-LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            +E     F+    +K+  ++    F     RA + GMPP GG   GIDR +MLL  + +
Sbjct: 441 DAEDQAARFNAQVEAKDGGDDEAMYFDHDFVRALEYGMPPTGGCGIGIDRFMMLLTDSAS 500

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 501 IRDVILFP 508


>gi|218899713|ref|YP_002448124.1| asparaginyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228903076|ref|ZP_04067213.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228910382|ref|ZP_04074197.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228967656|ref|ZP_04128677.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|218544920|gb|ACK97314.1| asparaginyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228792032|gb|EEM39613.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228849148|gb|EEM93987.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228856562|gb|EEN01085.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 463

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 131/376 (34%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWV 70
                G  V++SGW+  +R      F+++ D      V    + +   F+    +     
Sbjct: 13  TEKYAGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G V++               E+ A+KI+I  +++    P+  +R   E +R     
Sbjct: 73  VKVEGKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++        F+   TPI+T S  EGA +    +  +   
Sbjct: 124 LRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 VPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F E  D+++  E++L+   +          +F                   
Sbjct: 244 FWMVEPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVINS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              RI Y +AI+       D + P+   +   TEH  +    +F + + V    +     
Sbjct: 304 DFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  RMNE
Sbjct: 361 -------KAFYMRMNE 369



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M           D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMRMNE-------DGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|227513353|ref|ZP_03943402.1| asparaginyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227524496|ref|ZP_03954545.1| asparaginyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227083226|gb|EEI18538.1| asparaginyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227088366|gb|EEI23678.1| asparaginyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 426

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 78/335 (23%), Positives = 137/335 (40%), Gaps = 32/335 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCI 73
           V   V++  W+   R  G I FL +RD         V  N     FE+AK V+ E  + I
Sbjct: 8   VNEKVKIGVWLTNKRSSGKIAFLQLRDGTAYFQGVVVKNNVSEETFELAKEVKQETSMWI 67

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++   +             E+  + IE++S + E P+     +E+       +R L L
Sbjct: 68  TGIIHEDNRSHF-------GYEIEVESIEVVSESHEYPITP---KEHGVDFLMDHRHLWL 117

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  +I +       E FI+   PILT S+PEG  D    +  ++ ++  
Sbjct: 118 RSSRPHAVMRIRNEVIKATYDFFNDEGFIKIDAPILTGSAPEGTTDLFHTTYFDKDAY-- 175

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L+  
Sbjct: 176 LSQSGQLY-EEAGAEAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLDIQ 234

Query: 254 ENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRRYGTDKPDLRNPI 297
           E  +  + +   +   +                   + RI YD+AI     +  DL   +
Sbjct: 235 ERYIAYLVQRVIDNCQMELKTLGRDIETLKKYTILPYPRISYDEAIDLLKKNDFDLDWGV 294

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
              +  E F+  +F     +L+     + + +   
Sbjct: 295 DFGSPEETFLADQFDQPVFVLNYPKAIKPFYMKPH 329



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 51/156 (32%), Gaps = 33/156 (21%)

Query: 425 GIINCNCFEFCWIMDF--------------PFYEWNEEEKKIDFAHNPFTMPQGGMES-- 468
            ++  N F+  W +DF              P +  N        A  PF M         
Sbjct: 281 DLLKKNDFDLDWGVDFGSPEETFLADQFDQPVFVLN-----YPKAIKPFYMKPHPTRDDV 335

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +   DLL+ + +         EI  G  R    + +       G+  +     +      
Sbjct: 336 VICADLLAPEGYG--------EIIGGSERAVDYDYLYDQIVKAGLDPKE----YSWYLDL 383

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            + G  PH G   G++R +  + G  +VRE   FP 
Sbjct: 384 RKYGSVPHSGFGLGLERALTWITGEDHVREAIPFPR 419


>gi|94987469|ref|YP_595402.1| lysyl-tRNA synthetase (class II) [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731718|emb|CAJ55081.1| Lysyl-tRNA synthetase (class II) [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 457

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 59/349 (16%), Positives = 133/349 (38%), Gaps = 23/349 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y  +S  +L    +      +G +  +R  G +IF  I D  G  Q  A+ ++   E   
Sbjct: 6   YEAYSASEL--ESLDEIFACAGRIISLRSFGKVIFFHIMDRSGRIQCYASRENMGEEAFS 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           + +   +    G ++  + +     +  G++ L+   I +L+ +    LP          
Sbjct: 64  TFKKFDI----GDIVGVNGKLFRTKM--GELTLNCSTITLLAKS-FRSLPEKHNGLTNIE 116

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           +R++ R++DL  +   ++I + R++II+ +R  +    FIE  TPIL             
Sbjct: 117 LRYRQRYIDLIVNPKTRDIFRKRSKIIHEIRAFLEENGFIEVETPILQPIPGGAMARPFT 176

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                      +  AP+ Y + L+  GF++ F++   FR+E       P EF   +   +
Sbjct: 177 THNNAMDMTLYMRIAPELYLKRLLVGGFEKLFELNRSFRNEGISIQHNP-EFTMCEFYWA 235

Query: 243 FVEQDDILNTMENVLRGVFEEFSN----------GNTVSNNFLRICYDDAIRRYGTDKPD 292
           +    D++   E +   + ++              +     + +  + +++ + G   P+
Sbjct: 236 YATYLDLMELTEEMFAYLTKKICGTMTISYQGNTIDFTPGTWQKYTFHESLEKIGGHSPE 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
             N      V+E+      +V +         +++ +  +       F 
Sbjct: 296 FYNNFE--KVSEYIKEHGEKVLTTDKIGKLQAKLFDLDVENKLIQPTFI 342



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            ++ + E K I      +  P       K N        +++L   G EIA+     +  
Sbjct: 327 LFDLDVENKLIQPT-FIYHYPTDISPLSKKNKDNPEVTDRFELFIAGKEIANAFSELNDP 385

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F    + K   +           RA + GMPP  G   GIDR+VMLL  + ++R
Sbjct: 386 IDQRLRFEEQVLEKARGDEEACPMDEDYLRALEYGMPPAAGEGIGIDRLVMLLTDSPSIR 445

Query: 558 EVSLFP 563
           EV LFP
Sbjct: 446 EVILFP 451


>gi|46198987|ref|YP_004654.1| lysyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55981010|ref|YP_144307.1| lysyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|730872|sp|P41255|SYK_THETH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81364188|sp|Q5SJG7|SYK_THET8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81405966|sp|Q72JT9|SYK_THET2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1072959|pir||A55589 lysine-tRNA ligase (EC 6.1.1.6) - Thermus aquaticus
 gi|486665|emb|CAA50039.1| lysine--tRNA ligase [Thermus thermophilus]
 gi|46196611|gb|AAS81027.1| lysyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55772423|dbj|BAD70864.1| lysyl-tRNA synthetase (lysine--tRNA ligase) (LysRS) [Thermus
           thermophilus HB8]
          Length = 492

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 67/306 (21%), Positives = 124/306 (40%), Gaps = 36/306 (11%)

Query: 2   HRYR---THSCGDLGVSDVG---------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ 49
           + YR   THS   +  +  G           V ++G +  +R  G + F  + D  G  Q
Sbjct: 23  YPYRFPKTHSAEAILKAKRGAPPESEWPEEEVAVAGRLVALRRMGKVTFAHLLDETGRIQ 82

Query: 50  VVANPD-SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
           +    D +  +E+ K +    +L + G               TG++ +       L  + 
Sbjct: 83  LYFQRDLTPKYELLKKLDVGDILGVRG---------HPFTTKTGEVTVKVLDWTPLVKSL 133

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
             PLP        + +R++ R+LDL     + +   +R+ I+  +R    A+ F+E  TP
Sbjct: 134 -HPLPDKWHGLRDKEVRYRQRYLDLIVNPEVREVFRRRSEIVRYIRRFFEAKGFLEVETP 192

Query: 168 ILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           IL  ++    AR F          FY L  + + Y + L+  G+++ F+I   FR+E   
Sbjct: 193 ILQPTTGGAEARPFKTYHNALDHEFY-LRISLELYLKRLLVGGYEKVFEIGRNFRNEGID 251

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRI 277
            +  P EF  L+   ++ +  D+   +E +L G+       + V            F RI
Sbjct: 252 HNHNP-EFTMLEAYWAYADYQDMAGLVEELLSGLVLHLFGSHEVPYQGRVLNFKPPFRRI 310

Query: 278 CYDDAI 283
            + +A+
Sbjct: 311 SFVEAL 316



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 49/141 (34%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +     +  ++ DFP             A +P          L           ++DL  
Sbjct: 360 VEPELQDPTFVFDFPL------------AISPLAKRHREKPGL---------VERWDLYA 398

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAG 542
            G E+A      +      + F      ++  +            A + GMPP  G+  G
Sbjct: 399 GGMELAPCYSELNDPLDQRERFLEQARRRKEGDEEAPEPDEDFLLALEYGMPPAAGLGLG 458

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR+ MLL    ++R+V LFP
Sbjct: 459 IDRLAMLLTDQPSLRDVLLFP 479


>gi|291391498|ref|XP_002712168.1| PREDICTED: aspartyl-tRNA synthetase [Oryctolagus cuniculus]
          Length = 501

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 87/379 (22%), Positives = 149/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL V      V + G VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTVQKADEVVWVRGRVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +   PE    
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEIEGE 167

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSF-VEQDDILNTMENVLRGVFE----------EFSNGNTVSNNF------LR 276
           F  LD+EM+F     +++  + + L  +F+          +  N       F      LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTLVQIFKGLQERFQTEIQMVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    +  + +    ++F +  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 345 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGRLVKEKYD----TDFYILD------KY 394

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 395 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 445

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 446 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501


>gi|167044328|gb|ABZ09006.1| putative tRNA synthetases class II (D, K and N) [uncultured marine
           crenarchaeote HF4000_APKG6C9]
          Length = 436

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 80/287 (27%), Positives = 132/287 (45%), Gaps = 12/287 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H   +L  S   S V + GW+  VR HG I FL I D  G  Q+VA   S   ++ K+
Sbjct: 11  RSHYSKELDPSLAESDVTIMGWISSVRSHGNITFLTIVDKMGEVQIVAKKGSCPDDLIKN 70

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPES 123
           +         GL+         +      +E+  + + I S  E+  P   + +      
Sbjct: 71  LSKLKEHSSVGLI----GTVKTSEKAPNGVEIIPKDLRIFSSVEKIPPFDPYAKTIKNID 126

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R + R +DLRR  L      R+ ++ S+R     +NF E +TP + A++ EG       
Sbjct: 127 TRLEIRAIDLRRSVLQNVFNARSNVLRSIRQYFYDQNFTEINTPKMIATATEGGAALFPI 186

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              N+ +F A  Q+PQ YK+ L  S F++ F+IAP FR E  R++R   E   +D E ++
Sbjct: 187 FYYNKEAFLA--QSPQLYKEQLTMS-FEKVFEIAPIFRAEPSRTNRHLSEAISIDFEEAY 243

Query: 244 VEQDDILNTMENVLRGV---FEEFSNGNTVSNNF-LRICYDDAIRRY 286
           V+ +D++  +E +++      +EFS  N  ++     I        Y
Sbjct: 244 VDYNDVMKRIEQIIKQAILSIQEFSKDNHDADFTIPEISDTIPQYSY 290



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 24/132 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
           F +I D+P                  T P+     +  ++     +  +DL+    EI+S
Sbjct: 323 FYFIKDWP------------------TGPKPFYVKVNKDNPK--ISESFDLMYGDLEISS 362

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  R      +     N G+      + F      F  G+PPH G   G++R++M L G 
Sbjct: 363 GSTRIEKKSELEDRMKNKGMKI----DTFSYHLNVFDYGVPPHAGCGIGLERLMMALTGI 418

Query: 554 KNVREVSLFPMS 565
           +N+R+ + +P  
Sbjct: 419 ENIRDTTFYPRD 430


>gi|225868226|ref|YP_002744174.1| lysyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|225701502|emb|CAW98673.1| lysyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 497

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 64/342 (18%), Positives = 122/342 (35%), Gaps = 34/342 (9%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G+L                    ++G +   R  G + F  ++D  G  Q+    
Sbjct: 37  RTTNSGELKEKYSDKTKEDLQELQATAIIAGRLMTKRGKGKVGFAHLQDRQGQIQIYVRK 96

Query: 55  DS---ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
           DS     ++I K       + ++G +M             G++ + A K+  LS +   P
Sbjct: 97  DSVGDDNYDIFKKADLGDFIGVEGDIMRTD---------MGELSIKATKLTHLSKSLR-P 146

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP            ++ R LDL  +    +  V R+++I+ +R  +    F+E  TP+L 
Sbjct: 147 LPEKFHGLTDIETIYRKRHLDLISNRSSLERFVTRSKMISEIRRYLDGLGFLEVETPVLH 206

Query: 171 A-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             +    AR F+            L  AP+ + + L+  G +R ++I   FR+E   +  
Sbjct: 207 NEAGGAAARPFITHHNAQDIDM-VLRIAPELHLKRLIVGGMERVYEIGRIFRNEGMDATH 265

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            P EF  +++  ++ +  D++   E +++   +       +      I   +  RR    
Sbjct: 266 NP-EFTSIEVYEAYADYLDMMTLTEGIIQHAAKAVKGEGPIDYQGTEIKLHEPFRRVHMV 324

Query: 290 KP-------DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
                    D    +     T         V     SV    
Sbjct: 325 DAIKEVTGIDFWPEMTFEEATALANEKHVPVEKHFTSVGHII 366



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K N   S    +++L     E A+     +     L  F     +KE+ ++   G     
Sbjct: 396 KKNPEDSRFTDRFELFIMTKEYANAFTELNDPIDQLSRFKAQAAAKELGDDEATGIDYDF 455

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 456 VEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 496


>gi|323703770|ref|ZP_08115409.1| asparaginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323531294|gb|EGB21194.1| asparaginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 430

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 15/263 (5%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANPDSACFEIAKSVRSEWVLC 72
             VG  V + GW++  R  G I FL +RD  G+ Q  +V N     FE+AK++  E  L 
Sbjct: 12  KHVGEEVTVQGWLYNKRSSGKIQFLIVRDGTGLVQGVLVKNEAPELFELAKTLTQESSLR 71

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G+V              G  EL+   +EI+ +AEE P      +E+        R L 
Sbjct: 72  LKGIVREEPRAV-------GGYELNVTDLEIIHIAEEYP---ITHKEHGVDFLMDRRHLW 121

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R    +  +  R  I  + R      +F    +PI+T ++ EG           + ++ 
Sbjct: 122 IRTPRQNAILRIRAEIEQAARDFFHQNDFTLVDSPIITPAACEGTTTLFELDYHGEKAY- 180

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A    R +   P FR E  ++ R   EF+ ++ E +F + +D +  
Sbjct: 181 -LSQSGQLYNE-ASAMAVGRMYCFGPTFRAEKSKTRRHLMEFWMIEAEAAFFDHEDNMKL 238

Query: 253 MENVLRGVFEEFSNGNTVSNNFL 275
            E ++  + +           FL
Sbjct: 239 QEELVYFIIQRVLERRRKDLEFL 261



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 47/165 (28%), Gaps = 33/165 (20%)

Query: 417 RNHIAQELGIINCNCFEFCWIMDF--------------PFYEWNEEEKKIDFAHNPFTMP 462
           R    + + ++     EF W  DF              P +       +       F M 
Sbjct: 277 RLSYTEAVELLKSKGEEFQWGDDFGAPHETIISESFNAPVFV-----HRYPAEIKAFYMQ 331

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG--IRNHMSEVMLQAFSNVGISKEVVEN 520
                     D   +     DL+         G   R H  +++ Q      + K     
Sbjct: 332 PD------PEDPRVVLGA--DLIAPEGYGEIIGGGQRIHDFKLLEQRIEEHKLPK----E 379

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            F       + G  PH G   G++R V  +    +VRE   +P  
Sbjct: 380 AFEWYLDLRRYGSVPHSGFGLGLERTVAWICKLDHVRETIPYPRM 424


>gi|88603688|ref|YP_503866.1| aspartyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|97196725|sp|Q2FRU5|SYD_METHJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|88189150|gb|ABD42147.1| aspartyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 430

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 85/307 (27%), Positives = 138/307 (44%), Gaps = 27/307 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR---SEWVLCIDGLVMS 79
           + GW H +R  GG+ FL IRD  GI QV         EIA+++R    E V+ + G V  
Sbjct: 17  VIGWAHEIRDLGGLAFLLIRDRTGIIQVTVPKKKVAPEIAETIRAISRESVVRVTGTVKP 76

Query: 80  RSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                       G  EL    IEI+S+ A  LPL V  +       R   RFLD RR  +
Sbjct: 77  EGK-------APGGRELIPDAIEIVSLSATPLPLDVAEKVPAELDTRLDNRFLDARRPRV 129

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                 R  + ++ R       FIE +T  + A++ EG  +    +   + +F  L Q+P
Sbjct: 130 SAIFKIRNAVQHATRNFFFENGFIEINTSKIVAAATEGGTELFPIAYFEKEAF--LNQSP 187

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           Q YKQ++MA+GF++ ++I P FR E+  + +   E   +D+E+SF +   ++ T+E+++R
Sbjct: 188 QLYKQMMMAAGFEKVYEIGPIFRAEEHNTTKHLNEATSIDIEVSFTDHLGVMQTLEDLIR 247

Query: 259 GVFEEFSNGN-------------TVSNNFLRICYDDAIRRY-GTDKPDLRNPIIMHNVTE 304
            +++                        F R+ Y +AI     T + D+     +    E
Sbjct: 248 DIYQFVDKTCSDAIADLGLDDFAVPEKGFPRLPYSEAIEIASATCEEDIAYGDDIGTAAE 307

Query: 305 HFVHSEF 311
             +  E 
Sbjct: 308 RAIGEEM 314



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 31/154 (20%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
            A   I +E+G          +I+D+P             +  P+            ND 
Sbjct: 305 AAERAIGEEMG-------RLYFIVDWP------------SSIRPYYAMPYE------NDP 339

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
              KA  +D++    E++SG  R H  +++++  +  G++       F      F+ GMP
Sbjct: 340 EICKA--FDMMHPRMELSSGAQRVHQHDLLVEQIAKKGLNP----ENFEFYLNPFRFGMP 393

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PH G   G +R+V  +LG  NVRE  LFP  ++ 
Sbjct: 394 PHAGWGLGAERLVTTMLGLPNVREAVLFPRDRHR 427


>gi|327440744|dbj|BAK17109.1| aspartyl/asparaginyl-tRNA synthetase [Solibacillus silvestris
           StLB046]
          Length = 431

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 80/320 (25%), Positives = 123/320 (38%), Gaps = 34/320 (10%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLC 72
            +G  V++  W+   R  G + FL +RD  G      V        F +AK +  E  + 
Sbjct: 12  HIGETVKIGTWLANKRSSGKLAFLQLRDGSGFAQGVVVKEEVGEELFAVAKGMTQETSMY 71

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V +    +  A       EL+   IE++S A++ P+     +E+        R L 
Sbjct: 72  VIGEVKADERSSFGA-------ELNVTGIEVISPAKDYPITP---KEHGTEFLMDNRHLW 121

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR    H  +  R  II +         F +   PILT SSPEG  +       ++ +F 
Sbjct: 122 LRSRKQHAIMKVRNEIIRATYEFFNENGFTKMDPPILTGSSPEGTSELFHTKYFDEDAF- 180

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE D+ L  
Sbjct: 181 -LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEHDESLEV 238

Query: 253 MENVLRGVFEEFSNGN---------------TVSNNFLRICYDDAIRRY---GTDKPDLR 294
            E  +  + +                      V   F RI YD AI      G D     
Sbjct: 239 QEQYVSHIVQSVLKNCKLDLERLGRDTSKLENVKAPFPRISYDQAIEFLHEQGFDDIQWG 298

Query: 295 NPIIMHNVTEHFVHSEFRVF 314
           +     + T    H +  VF
Sbjct: 299 DDFGAPHETAIANHYDKPVF 318



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 19/128 (14%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           D P +              PF M       + +   DL++ + +         EI  G  
Sbjct: 314 DKPVF-----ITCYPIGIKPFYMQPHPERDDVVLCADLIAPEGYG--------EIIGGSE 360

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R +  E+M        +S     + +       + G  PH G   G++R V  + G +++
Sbjct: 361 RIYDYELMKSRLEEHNLSM----DAYAWYLDLCKQGAVPHSGFGLGLERTVAWISGTEHI 416

Query: 557 REVSLFPM 564
           RE   FP 
Sbjct: 417 RESIPFPR 424


>gi|332976957|gb|EGK13772.1| asparagine--tRNA ligase [Desmospora sp. 8437]
          Length = 429

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 70/294 (23%), Positives = 122/294 (41%), Gaps = 32/294 (10%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKS 64
           + G++  + VG  VRL  W++  R  G I FL +RD  G  Q   V +      +E A  
Sbjct: 4   TIGNVS-AHVGEQVRLGAWLYNKRSSGKIQFLQLRDGTGFIQGVLVKSKVSPEVWEAAVE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E  L ++G + +               E+    IE++  A+E P      +E+    
Sbjct: 63  LTQESSLYVEGTIRADKR-------APSGYEMDVTSIEVIQQAQEYP---IALKEHGVEF 112

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              +R L +R       +  R++I+ ++R  +  + F     P+LT SS EG  +     
Sbjct: 113 LMDHRHLWIRSPRQRAILRIRSKIVQAVRGWLDGQGFTLVDPPVLTPSSCEGTTNLFHTK 172

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             ++ ++  L Q+ Q Y +   A    R +   P FR E  ++ R   EF+ ++ EM+FV
Sbjct: 173 YFDEDAY--LTQSGQLYMEAA-AMALGRVYSFGPAFRAEKSKTRRHLIEFWMIEPEMAFV 229

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAI 283
           + ++ L   EN+L  +                            F RI YD+A+
Sbjct: 230 DHEENLVIQENMLTHLVRYVLENCREELEILGRDPASLEKVQGPFPRITYDEAV 283



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 49/147 (33%), Gaps = 7/147 (4%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL-LSIKAF 480
           + + ++N    EF W  DF      +  +  D        P          D      A 
Sbjct: 281 EAVELLNREGMEFTWGEDFGAPHETKIAESFDRPVFITHYPTEIKAFYMKPDPSRPEVAL 340

Query: 481 QYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
             DL+      EI  G  R     ++ + F    +S+      +       + G  PH G
Sbjct: 341 CADLIAPEGYGEIIGGSQRIDDPALLDERFQQHQLSR----EDYAWYMDLRKYGTVPHSG 396

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMS 565
              G++R V  + G  +VRE   FP  
Sbjct: 397 FGLGLERTVAWICGLDHVRETIPFPRM 423


>gi|228941737|ref|ZP_04104284.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228974661|ref|ZP_04135227.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981255|ref|ZP_04141555.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228778455|gb|EEM26722.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785064|gb|EEM33077.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817949|gb|EEM64027.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326942342|gb|AEA18238.1| asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 463

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 131/376 (34%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWV 70
                G  V++SGW+  +R      F+++ D      V    + +   F+    +     
Sbjct: 13  TEKYAGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G V++               E+ A+KI+I  +++    P+  +R   E +R     
Sbjct: 73  VKVEGKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++        F+   TPI+T S  EGA +    +  +   
Sbjct: 124 LRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 VPKGEDGKVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F E  D+++  E++L+   +          +F                   
Sbjct: 244 FWMVEPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVINS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              RI Y +AI+       D + P+   +   TEH  +    +F + + V    +     
Sbjct: 304 DFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  RMNE
Sbjct: 361 -------KAFYMRMNE 369



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M           D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMRMNE-------DGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|54307775|ref|YP_128795.1| lysyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81400152|sp|Q6LUN2|SYK_PHOPR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|46912198|emb|CAG18993.1| putative lysyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 502

 Score =  193 bits (491), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 64/292 (21%), Positives = 133/292 (45%), Gaps = 25/292 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + + G  V ++G V   R      FL I+D  G  Q  A+       + K ++ ++    
Sbjct: 56  LEEEGHIVAIAGRVMAKRGP----FLAIQDVSGRIQAYADKT-----VQKELKEKYSGLD 106

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +   +    G + ++    E+L+ A   PLP        +  R++ R++DL
Sbjct: 107 IGDIIGVKGQLHLSG--KGDLYVTMDNYELLTKALR-PLPEKFHGLTDQETRYRQRYVDL 163

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N ++ R+++++++R  M+ ++F+E  TP++        AR F+          
Sbjct: 164 IVNEDSRNTMIMRSKVVSAIRNFMMKKDFMEVETPMMHVIPGGATARPFITHHNALDIDM 223

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++  M++ + +D+++
Sbjct: 224 Y-LRVAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYNDLMD 281

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
             E +L  +  +      +            + RI   +AI++Y  D  +++
Sbjct: 282 LTEEMLSSIATDLHGSPKLPYGDAIVDFGGPYPRISMLNAIKQYNPDNAEIQ 333



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 6/111 (5%)

Query: 459 FTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F        S     ND       +++    G E+A+G    + ++   Q F     +K+
Sbjct: 384 FITEYPADISPLARRNDTNDFITDRFEFFIGGREVANGFSELNDAQDQDQRFKAQVNAKD 443

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             ++           A + G+PP  G   GIDR+VML      +R+V LFP
Sbjct: 444 AGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFP 494


>gi|229581477|ref|YP_002839876.1| aspartyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012193|gb|ACP47954.1| aspartyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 429

 Score =  193 bits (491), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 84/303 (27%), Positives = 151/303 (49%), Gaps = 22/303 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            +RTH   +L     G+ V+++GWVH +R  GG +F+ +RD  GI Q+V    ++ ++  
Sbjct: 1   MFRTHLVSELNPKLDGAEVKVAGWVHNIRNLGGKVFILLRDKSGIGQIVVEKGNSAYDKI 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYP 121
            ++  E  L ++G+V +              IE+ A+ +EILS A+  LPL V G+ +  
Sbjct: 61  MNIGLESTLVVNGIVKADPR-------APNGIEVHAKDVEILSYAKSPLPLDVTGKVKAD 113

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              R + R LDLRR  +   +  ++  + S R  +    F+E  TP + AS+ EG     
Sbjct: 114 IDTRLRERLLDLRRLEMQAVLKIQSVAVKSFRETLYKYGFVEVFTPKIIASATEGGAQLF 173

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + +F A  Q+PQ YK+ L+A   +R F+IAP +R E+  +     EF  +D+EM
Sbjct: 174 PVLYFGKEAFLA--QSPQLYKE-LLAGAIERVFEIAPAWRAEESDTPYHLSEFISMDVEM 230

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F + +DI+  +E ++  +  +            R   ++ ++      PD++ P+   +
Sbjct: 231 AFADYNDIMALIEQIIYNMINDV-----------RRECENELKILNYTPPDVKIPMKKIS 279

Query: 302 VTE 304
            +E
Sbjct: 280 YSE 282



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 62/160 (38%), Gaps = 30/160 (18%)

Query: 418 NHIAQELG------IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
                ++G      + +    +  ++ D+P+               PF   Q        
Sbjct: 294 IKFGDDVGTPELRVLYSELKEDLYFVTDWPWLS------------RPFYTKQKKD----- 336

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
                  +  +DL+    EI SG  RNH+ EV+  +    G++       F    + F  
Sbjct: 337 ---NPQLSESFDLIFRWLEIVSGSSRNHVKEVLENSLKVRGLNP----ESFEFFLKWFDY 389

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GMPPH G   G+ R++++L G ++V+EV  FP  +     
Sbjct: 390 GMPPHAGFGMGLARVMLMLTGLQSVKEVVPFPRDKKRLTP 429


>gi|123967040|ref|YP_001012121.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|166229816|sp|A2BZ03|SYK_PROM5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123201406|gb|ABM73014.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 512

 Score =  193 bits (491), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 81/350 (23%), Positives = 138/350 (39%), Gaps = 31/350 (8%)

Query: 16  DVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEI-AKSVRSEW 69
           D G      V L+G V   R  G I F  I D  G  Q+         +EI AK +  E 
Sbjct: 44  DNGQEFDLNVSLAGRVLAKRVMGKIAFFTITDQEGKIQLYLEKRIIDDYEINAKLLSFED 103

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           +  I  +               G++ +   K E+LS + + PLP           R++ R
Sbjct: 104 LKEIVDIGDWIGVFGTIKKTNKGELSIKVSKWEMLSKSLQ-PLPDKWHGLTDIEKRYRQR 162

Query: 130 FLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVN 187
           +LDL  + L K + K R + I+ +R  +  +NF+E  TPIL + +    AR F+      
Sbjct: 163 YLDLIVNPLSKTVFKTRAKCISLIRRWLDEKNFLEIETPILQSEAGGAEARPFITHHNTL 222

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A + + + ++  GF++ +++   FR+E   +   P EF  +++  +F    
Sbjct: 223 DIPLY-LRIATELHLKRMVVGGFEKVYELGRIFRNEGVSTKHNP-EFTSVEIYQAFSNYI 280

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTE 304
           D++N  E++++ +                 C D  +  Y     D   P   I M NV +
Sbjct: 281 DMMNLTEDLIKNIVLS--------------CCDSLVINYQDKVIDFSKPWKRISMKNVVK 326

Query: 305 HFVHSEFRVFSKILSVNPGYE---VWAIPAKGGGGNRAFCDRMNEWARSQ 351
            +   +F  F   L+    +       I  K     R   +   +   SQ
Sbjct: 327 EYTGIDFDSFDGDLNKAKKFSEEINIEISPKINTLGRLLNEVFEQKVESQ 376


>gi|167045666|gb|ABZ10314.1| putative tRNA synthetases class II (D, K and N) [uncultured marine
           crenarchaeote HF4000_APKG10L15]
          Length = 431

 Score =  193 bits (491), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 81/339 (23%), Positives = 141/339 (41%), Gaps = 29/339 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V L GWV  +R  G + FL +RD  GITQ++   D    +    
Sbjct: 8   RTHYIEDINTDMKGQEVILGGWVEDLRKMGKMTFLTLRDVTGITQIILTDD--VMKSIDD 65

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123
           +  + V+ + G +    A          + E+ A +I +L+ A   LP+   G  E    
Sbjct: 66  ITRQSVVRVTGKIQDTKARDF-------ECEIKADEINVLAKAVHPLPIDPLGRLESHID 118

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R   R LD+R          R  ++ S+R     + F E +TP +  S+ EG  +    
Sbjct: 119 NRLNSRALDMRNQKTASIFKIRHHVLASLRKTFAEKKFTEITTPKIIGSASEGGANLFSL 178

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++ A  Q+PQ YK+  M  G +R F+IA  +R E   + R   EF  +D+E +F
Sbjct: 179 DYFGKQAYLA--QSPQLYKEQ-MTIGLERVFEIASFYRAEKSHTGRHLSEFTSVDIEAAF 235

Query: 244 VEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYGTDKP 291
           ++  D++N +E+++   F+  S                 +  F +I Y  A+        
Sbjct: 236 MDYTDVMNVLEDLVFNTFKYVSENCKKEQEIIGNKITMPNGPFKKITYSQALEELNRKDA 295

Query: 292 DLRNPIIMHN----VTEHFVHSEFRVFSKILSVNPGYEV 326
            L     + +    + E    + + +    + + P Y +
Sbjct: 296 KLEFGDDLLDSHLRIIEENHPNFYFITDWPIKLKPFYIM 334



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 63/162 (38%), Gaps = 29/162 (17%)

Query: 415 DARNHIAQEL-----GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
           DA+     +L      II  N   F +I D+P                PF + +      
Sbjct: 294 DAKLEFGDDLLDSHLRIIEENHPNFYFITDWP------------IKLKPFYIMEKED--- 338

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
                    +  +DL     E++SGG R H  E +    S   +       +F    +AF
Sbjct: 339 -----NPELSESFDLQFGYLELSSGGSRLHNPEKIKMRLSEQNLDP----AKFSEHLQAF 389

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             GMPPH G   G++R++ ++LG  NVREV L+P        
Sbjct: 390 DWGMPPHAGWGLGLERLLTVILGIDNVREVILYPRDPERLKP 431


>gi|159030332|emb|CAO91227.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 454

 Score =  193 bits (491), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 69/368 (18%), Positives = 123/368 (33%), Gaps = 39/368 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              V + GWV   R      FL++ D   +  +    +S   +    +++       G  
Sbjct: 15  DQSVTVQGWVRTKRELKEFTFLEVNDGSSLANLQVILESTLPDYENVLKTIS----TGTA 70

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           ++ S   + +      IEL A +I +         P+  +R   E +R     L  R +T
Sbjct: 71  IAVSGNLVPSPGKGQNIELKAAEITLYGDC-PPEYPLQKKRHSFEFLR-TIAHLRARTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-------GS 190
           L   +  R     ++      + FI   TPI+TA+  EGA +    + ++          
Sbjct: 129 LGAVMRVRNACATAIHSFFQEKGFIWVHTPIITANDCEGAGELFTVTSLDLKKTANFAED 188

Query: 191 FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           F+   A      Q +  +MA      +   P FR E+  + R   EF+ ++ EM+F + +
Sbjct: 189 FFGKRAYLTVSGQLQAEVMAMALSNVYTFGPTFRAENSNTSRHLAEFWMVEPEMAFCDLE 248

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RICYDDAIRRY 286
              +  E  L+ +F+           F                      RI Y +AI   
Sbjct: 249 GDQDLAEAFLKYIFKFVLENCPEDLQFFNERIDKTVLSTAENIVNSEFGRITYSEAIELL 308

Query: 287 GTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                    P+       +EH  +    +F K + V    +           N      M
Sbjct: 309 EKADRQFEFPVEWGVDLQSEHERYLAEELFKKPVIVTNYPKTIKAFYMRLDDNNKTVSAM 368

Query: 345 NEWARSQG 352
           +  A   G
Sbjct: 369 DILAPKIG 376



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    +V++Q     G++ + +           + G  PH G   G +R+V  
Sbjct: 377 EIIGGSQREERLDVLIQRMQEQGMNPDDLW----WYLDLRRYGSVPHAGFGLGFERLVQF 432

Query: 550 LLGAKNVREVSLFPMSQNFCD 570
           + G  N+R+V  FP +    D
Sbjct: 433 MTGMTNIRDVIPFPRTPLSAD 453


>gi|281425305|ref|ZP_06256218.1| hypothetical protein HMPREF0971_02277 [Prevotella oris F0302]
 gi|299141503|ref|ZP_07034639.1| lysine--tRNA ligase [Prevotella oris C735]
 gi|281400598|gb|EFB31429.1| lysine--tRNA ligase [Prevotella oris F0302]
 gi|298576839|gb|EFI48709.1| lysine--tRNA ligase [Prevotella oris C735]
          Length = 579

 Score =  193 bits (490), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 116/273 (42%), Gaps = 10/273 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + Y T    +    +    V ++G +   R  G   F +++D  G  QV  + D  C + 
Sbjct: 36  NAYSTDIKDEFNDDEKQREVVIAGRMMSRRIMGKASFAELQDSKGRIQVYISRDDICPDE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---- 117
            K + ++    +  +      +       TG+I + A++I +LS + +    V  +    
Sbjct: 96  NKDLYNKVFKKLLDIGDIIGVKGFVFRTQTGEISVHAKEITLLSKSLKPLPIVKYKDGVA 155

Query: 118 --REYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
             +     +R + R++DL  +  + +  +KR  I+ +MR       + E  TP L + + 
Sbjct: 156 YDKFDDPELRARQRYVDLIVNDGVKETFLKRATILRTMRNFFDEHGYTEVETPTLQSIAG 215

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y +  A + Y + L+  GF+  ++I   FR+E       P E
Sbjct: 216 GASARPFITHFNALNIDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKFHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           F  +++ + + + + +++  E +L  + +  +N
Sbjct: 274 FTCMELYVQYKDYNWMMSFTEQLLETICKAVNN 306



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 9/146 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+A+     +      + F
Sbjct: 381 EGTFIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERF 440

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  +  ++          RA Q GM P  GI  GIDR+ ML+ G + ++EV LFP 
Sbjct: 441 KEQMKLADKGDDEAMIIDQDFLRALQYGMAPTSGIGIGIDRLCMLMTGKEFIQEVLLFPQ 500

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLR 590
            +    +    P + S+++  ELG+ 
Sbjct: 501 MKPEAKM----PQS-SIKEWAELGVE 521


>gi|298713460|emb|CBJ27015.1| Lysyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 710

 Score =  193 bits (490), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 53/273 (19%), Positives = 110/273 (40%), Gaps = 18/273 (6%)

Query: 6   THSCGDL---------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           THS  +L         G  D  + V ++G +   R  G + F +++D  G  Q+  +   
Sbjct: 225 THSSSELQKQWEGLEAGTEDEEAEVSVAGRIMARRVFGKLAFFNMQDSEGSFQLYIDKGR 284

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E            I G      A+        G++ +  +   +LS +  LPLP   
Sbjct: 285 LGDEFKDLKTWTDAGDIVG------AKGTVKRTDKGELSVYVKSWAMLSKS-VLPLPDKF 337

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPE 175
                   R++ R +D+  +   +++ + R ++ + +R  +  ++F+E  TP+L + +  
Sbjct: 338 HGLKDTEKRYRQRHVDMMVNPAVRDVFRMRAKVTSFIRRSLDDDDFLEIETPVLQSIAGG 397

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            A                L  A + + + L+  GFDR +++   FR+E   +   P EF 
Sbjct: 398 AAAKPFATHHNVLDMPLTLRIATELHLKRLVVGGFDRVYELGRIFRNEGISTRHNP-EFT 456

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
            +++  ++ +  D++   E ++ G   E     
Sbjct: 457 SVEVYQAYADYHDMMELTERLVAGAASEVLGTT 489



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             ++++   G E+A+              F      K   +            A + GMP
Sbjct: 602 TERFEVFVQGREMANAFSELTDPVDQRNRFELQAAKKAAGDEEACDVDDDFLDALERGMP 661

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G+  GIDR++MLL GA ++R+V  FP
Sbjct: 662 PTAGLGIGIDRLIMLLAGATSIRDVIAFP 690


>gi|227828226|ref|YP_002830006.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|227830984|ref|YP_002832764.1| aspartyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229585454|ref|YP_002843956.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238620417|ref|YP_002915243.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|284998473|ref|YP_003420241.1| aspartyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|227457432|gb|ACP36119.1| aspartyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|227460022|gb|ACP38708.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228020504|gb|ACP55911.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238381487|gb|ACR42575.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|284446369|gb|ADB87871.1| aspartyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|323475293|gb|ADX85899.1| aspartyl-tRNA synthetase [Sulfolobus islandicus REY15A]
 gi|323478018|gb|ADX83256.1| aspartyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 429

 Score =  193 bits (490), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 84/303 (27%), Positives = 151/303 (49%), Gaps = 22/303 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            +RTH   +L     G+ V+++GWVH +R  GG +F+ +RD  GI Q+V    ++ ++  
Sbjct: 1   MFRTHLVSELNPKLDGAEVKVAGWVHNIRNLGGKVFILLRDKSGIGQIVVEKGNSAYDKI 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYP 121
            ++  E  L ++G+V +              IE+ A+ +EILS A+  LPL V G+ +  
Sbjct: 61  MNIGLESTLVVNGIVKADPR-------APNGIEVHAKDVEILSYAKSPLPLDVTGKVKAD 113

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              R + R LDLRR  +   +  ++  + S R  +    F+E  TP + AS+ EG     
Sbjct: 114 IDTRLRERLLDLRRLEMQAVLKIQSVAVKSFRETLYKYGFVEVFTPKIIASATEGGAQLF 173

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + +F A  Q+PQ YK+ L+A   +R F+IAP +R E+  +     EF  +D+EM
Sbjct: 174 PVLYFGKEAFLA--QSPQLYKE-LLAGAIERVFEIAPAWRAEESDTPYHLSEFISMDVEM 230

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F + +DI+  +E ++  +  +            R   ++ ++      PD++ P+   +
Sbjct: 231 AFADYNDIMALIEQIIYNMINDV-----------RRECENELKILNYTPPDVKIPMKKIS 279

Query: 302 VTE 304
            +E
Sbjct: 280 YSE 282



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 71/196 (36%), Gaps = 33/196 (16%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA--DARNHIAQELGIINCNCFEFC 435
           +    + +    ++   +        G  +KF       + R        + +    +  
Sbjct: 265 NYTPPDVKIPMKKISYSEAIEILKSKGVNIKFGDDIGTPELRV-------LYSELKEDLY 317

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           ++ D+P+               PF   Q               +  +DL+    EI SG 
Sbjct: 318 FVTDWPWLS------------RPFYTKQKKD--------NPQLSESFDLIFRWLEIVSGS 357

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            RNH+ EV+  +    G++       F    + F  GMPPH G   G+ R++++L G ++
Sbjct: 358 SRNHVKEVLENSLKVRGLNP----ESFEFFLKWFDYGMPPHAGFGMGLARVMLMLTGLQS 413

Query: 556 VREVSLFPMSQNFCDL 571
           V+EV  FP  +     
Sbjct: 414 VKEVVPFPRDKKRLTP 429


>gi|329666683|gb|AEB92631.1| lysyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 509

 Score =  193 bits (490), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 81/440 (18%), Positives = 157/440 (35%), Gaps = 37/440 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L      +  +++G +   R  G + F D+ D  G  Q+    D    + 
Sbjct: 39  EKYSNEDKDELNADMPMT--KIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDN 96

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  +   +    G  +    E +     TG++ + A  I  LS A   PLP   +    
Sbjct: 97  YKIFKKSDI----GDFLGIDGEVM--KTDTGELTIRATHITFLSKALR-PLPNKWDGLKD 149

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
               ++ R+LDL  +         RT+II ++R  +   +F+E  TP+L        AR 
Sbjct: 150 VEQIYRQRYLDLITNHDSYMRFVHRTQIIQAIRGYLNNRDFLEVETPVLHNIPGGAEARP 209

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  A +   + L+  G +R ++I   FR+E   +   P EF +L+ 
Sbjct: 210 FITHHNALDIDLY-MRIALELPLKRLIVGGMERVYEIGRVFRNEGLDTKHNP-EFTELET 267

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  D+++  E ++R   +                 D  I   GTD  DL  P   
Sbjct: 268 YAAYWDFHDVMDEAEGIIRAAAKVV-------------SPDGKITYQGTD-IDLGKPFRR 313

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++ +         F K +++    +V                 +N +    G+  +   
Sbjct: 314 VHMVDLIKEKTGVDFWKPMTIEEARKVADEHNVHYESYWKVGHIINAFFEEFGEGSIVQP 373

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVR---LDMQDGDSCFFIA---GDPLKFCSFA 413
            +     G+   + P+AK          R     +  + G++   +        +F    
Sbjct: 374 TFVY---GHPVEVSPLAKKNADDPRFTDRFEIFIMGAEYGNAFSELNDPDDQRHRFEDQM 430

Query: 414 ADARNHIAQELGIINCNCFE 433
           A+ R     E  +I+ +   
Sbjct: 431 AE-REAGNDEADMIDEDYLR 449



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 6/153 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A E  +   + ++   I++  F E+   E  I      +  P       K N     
Sbjct: 338 RKVADEHNVHYESYWKVGHIINAFFEEF--GEGSIVQPTFVYGHPVEVSPLAKKNADDPR 395

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGM 533
              ++++   G E  +     +  +     F +    +E   +          RA + GM
Sbjct: 396 FTDRFEIFIMGAEYGNAFSELNDPDDQRHRFEDQMAEREAGNDEADMIDEDYLRAMEFGM 455

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 456 PPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 488


>gi|145592543|ref|YP_001154545.1| aspartyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145284311|gb|ABP51893.1| aspartyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 428

 Score =  193 bits (490), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 75/268 (27%), Positives = 133/268 (49%), Gaps = 14/268 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---A 57
           M+  +TH   ++     GS V ++GWV  +R  G I F+ +RD  G  Q+          
Sbjct: 1   MYPKKTHWTSEVTPELHGSNVVVAGWVWELRDLGKIKFIVVRDREGFVQITLKAGKTPDH 60

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F+I   +  E V+ + G+V S       + I    +E+  ++I +L+ A+ LPL ++ E
Sbjct: 61  LFKIFSELGKEDVVVVKGIVES-------SKIAKSGVEIFPEEIWVLNKAKPLPLDIWSE 113

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                + R K+R +DL+R          + I+ ++R  M  E F+E  TP +  +S EG 
Sbjct: 114 TP-DLATRLKWRSVDLKRPRNLAVFSTASAILRAIRDVMYEEGFVEVFTPKIIVTSTEGG 172

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +        + ++  L Q+PQ YK+ L AS  +R F+I P +R E   +D    EF  +
Sbjct: 173 AELFPVMYFERVAY--LSQSPQLYKEQLTAS-LERVFEIGPAYRAEKHNTDYHLNEFISV 229

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFS 265
           D E +F++ +DI++ +E +++ V    +
Sbjct: 230 DAEAAFMDYNDIMDILEKLVKRVISTIT 257



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 4/94 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K+  YDL+ NG E+ASG  R H  + + +     G+   +    F      F  GMPPH 
Sbjct: 339 KSESYDLIINGIEVASGATRVHRRDELEEEMKRRGLDPRL----FESHLAVFDYGMPPHA 394

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   G +R+V  LLG  NVR  +L+P  +   + 
Sbjct: 395 GFGLGFNRLVAALLGLDNVRHATLYPRDRYRVEP 428


>gi|322368673|ref|ZP_08043240.1| aspartyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320551404|gb|EFW93051.1| aspartyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 436

 Score =  193 bits (490), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 92/359 (25%), Positives = 154/359 (42%), Gaps = 34/359 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIA 62
           RT    D+     G  V ++G VH +R  GG+ F+ +RD  G TQVV     D   FE A
Sbjct: 4   RT-YSDDITAEQDGETVSIAGHVHDIRDLGGLSFVIVRDREGQTQVVFKEGNDEDLFEAA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYP 121
             +  E V+ I G V +       ++   G +EL   ++E+++ AE  LP+ V  + E  
Sbjct: 63  NDLGKEDVVRITGSVKA-------SDQAPGGVELMPSELEVINAAESPLPMEVAKDIESD 115

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            S R   R +DLR+   +     R++++N+M      E F    TP+L+    EG  +  
Sbjct: 116 LSTRLDNRSIDLRKPEAYAVFSLRSKLVNAMEEWFDGEGFRNVDTPLLSQEGAEGGAELF 175

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 +  F  L Q+PQ YKQ+LMA+GFD+ ++    FR E   + R   E    D+E+
Sbjct: 176 PVVYYGEEVF--LSQSPQLYKQMLMAAGFDKIYETGTAFRAEAFATSRHVSEISMFDVEL 233

Query: 242 SFV-EQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDA------ 282
           +++ +  D+++  E  LR   E  S            +    ++ F R+ +++A      
Sbjct: 234 AYIDDHHDVMDVQEESLRHTLERVSENATDELETLGVDLAVPTDPFPRVTFEEARDILAT 293

Query: 283 -IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
                  D+ DL        + E+F       F  +   +  +            +R F
Sbjct: 294 EFDHVPEDETDLDTKGE-KLLGEYFEEQGHPAFFVVGYPDEKFYYKQDVPGDDIASRKF 351



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 6/157 (3%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           +AR+ +A E   +  +  +     +    E+ EE+     A      P       +    
Sbjct: 286 EARDILATEFDHVPEDETDLDTKGEKLLGEYFEEQGH--PAFFVVGYPDEKFYYKQDVPG 343

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             I + ++DL+  G E++SGG R H  E M +   + G         F     AF+ G+P
Sbjct: 344 DDIASRKFDLIYKGQELSSGGQREHDIETMSEYMEDQGADP----ENFHFYLEAFRFGIP 399

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PHGG   GIDR+V  +    N++E  LFP   +    
Sbjct: 400 PHGGYGLGIDRLVQKVGELDNIKEAILFPRDPDRVTP 436


>gi|194890440|ref|XP_001977309.1| GG18967 [Drosophila erecta]
 gi|190648958|gb|EDV46236.1| GG18967 [Drosophila erecta]
          Length = 574

 Score =  193 bits (490), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 93/583 (15%), Positives = 178/583 (30%), Gaps = 110/583 (18%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           HS  + G +     + ++G VH +R  G  +IF D+R      QV+A+  S   E     
Sbjct: 96  HSLKE-GETLENVKLSVAGRVHAIRESGAKLIFYDLRGEGVKVQVMASAKSYKSEA--DF 152

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            ++      G ++    +        G++ +   +I++LS      LP        +  R
Sbjct: 153 VTDTAKLRRGDIIGVVGQP--GKTKKGELSVMPSEIKLLSPCL-HMLPHLHFGLKDKETR 209

Query: 126 FKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           ++ R+LDL   + + +N   R +II+ +R  +    F+E  TP++   +        V  
Sbjct: 210 YRQRYLDLILNNKVRENFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTH 269

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             +      +  AP+ Y ++L+  G DR ++I                            
Sbjct: 270 HNDLKMDLFMRIAPELYHKMLVVGGLDRVYEIG--------------------------- 302

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                             +F N      +       +    Y              +  +
Sbjct: 303 -----------------RQFRNEGIDLTHNPEFTTCEFYMAYA-------------DYAD 332

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
               +E  V   + ++   Y++   P +G  G     D    + R      L        
Sbjct: 333 IMDITEQLVSGMVKAIRGSYKIIYHP-EGPEGPEQELDFTPPFKRVSMIKTL-------- 383

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
               +    P A   N   T     +L  +           P               +E 
Sbjct: 384 -EEKLQVKFPAADTFNSPETNQFLSQLCAKH----QVECPAPRTTARLLDKLVGEFIEEF 438

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            +         +I                   +P  M             +     +++L
Sbjct: 439 CV------NPTFI-----------------CEHPQIMSPLAKYHRS----IPGLTERFEL 471

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIA 540
                EI +     +   V  + F      K   ++           + + G+PP GG  
Sbjct: 472 FVAKKEICNAYTELNDPVVQRERFEQQASDKAAGDDEAQLVDENFCTSLEYGLPPTGGFG 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            GIDR+ M L  + N++EV LFP  +        + +  + +Q
Sbjct: 532 MGIDRLAMFLTDSNNIKEVLLFPAMKPEDANRTAAETAPAAQQ 574


>gi|94971623|ref|YP_593671.1| asparaginyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
 gi|122986019|sp|Q1IHQ3|SYN_ACIBL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|94553673|gb|ABF43597.1| asparaginyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 442

 Score =  193 bits (490), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 69/319 (21%), Positives = 125/319 (39%), Gaps = 31/319 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSA 57
           M +    +  ++G  D G  V + GW++ +R  G ++F   RD  G+ Q V    N    
Sbjct: 1   MEQAPVSTIHEIGKHD-GQSVTIKGWLYNLRESGKLLFPIFRDGTGLLQGVLFKKNVSPE 59

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F++ K++  E  + + G V +            G  E+    +E++    E        
Sbjct: 60  LFDLVKNLTQESSVIVTGNVRAEQR-------APGGYEMDVTALEVVQRVPENEPYPITP 112

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           +E+      ++R L +R       +  R  I+ S       + F     PILT ++ EG 
Sbjct: 113 KEHGIEFLMEHRHLWVRSQRQAAILRIRGEIVRSAHEFFDKQGFTLTEPPILTPAACEGT 172

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                       +F  L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ +
Sbjct: 173 STLFPVDYFGDPAF--LTQSGQLYIE-ATAMALGKVYSFGPTFRAEKSKTRRHLTEFWMV 229

Query: 238 DMEMSFVEQDDILNTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDA 282
           + E++F E DDI+   E+ +  + +               + S    +   F RI YD+A
Sbjct: 230 EPEVAFAELDDIMKLAEDFITHIVKSVLERRRDDLKTIERDLSKLENIDTPFPRISYDEA 289

Query: 283 --IRRYGTDKPDLRNPIIM 299
             + + G  K +L +    
Sbjct: 290 VQMLQEGHAKGELESRFEW 308



 Score = 61.2 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 35/115 (30%), Gaps = 10/115 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M      S     +  +    Y       E+  G  R    E +L     
Sbjct: 332 RYPVEVKAFYMEPDPNNSKVALCVDVLAPEGY------GEVIGGSQRMGSYEKLLARIHE 385

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             +     E  F       + G  PH G   GI+R V  + G  +VRE   F  +
Sbjct: 386 HQLP----EESFKWYLDLRKFGGVPHSGFGMGIERAVAWICGLDHVRETIPFART 436


>gi|87301696|ref|ZP_01084536.1| lysyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87283913|gb|EAQ75867.1| lysyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 506

 Score =  193 bits (490), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 65/360 (18%), Positives = 127/360 (35%), Gaps = 30/360 (8%)

Query: 2   HRY----RTHSCGDL-GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           HR+    R H   DL    +    V ++G V   R  G + F  + D  G  Q+     +
Sbjct: 36  HRHAELQRLH--ADLANGQERDERVSVAGRVMTRRVMGKLAFFTLLDETGPIQLFIEKAT 93

Query: 57  ACF---EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
                 +  ++      L   G  +  S      +   G++ +     ++L+ A + PLP
Sbjct: 94  LAAALPDQPEAFTQLTTLVDAGDWIGVSGSLRRTD--RGELSVKVTGWQMLTKALQ-PLP 150

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRI-INSMRCRMIAENFIECSTPILTAS 172
                      R++ R+LDL      +   +R  + ++ +R  +    F+E  TP+L A 
Sbjct: 151 DKWHGLADVEKRYRQRYLDLVVSPQTRETFRRRALLVSGIRRWLDERQFLEIETPVLNAE 210

Query: 173 SPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F             L  A + + + L+  GF+R +++   FR+E   +   P
Sbjct: 211 AGGADARPFTTHHNTLDLPL-VLRIATELHLKRLVVGGFERVYELGRIFRNEGVSTRHNP 269

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF  +++  ++ +  D++   E ++  V ++      +      I      RR      
Sbjct: 270 -EFTTVEIYQAYADYTDMMVLTEELIASVCQQVCGTTAIEYQGTAIDLTPPWRR------ 322

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN--RAFCDRMNEWAR 349
                  MH + E     +F  FS             +       +  R   +   +   
Sbjct: 323 -----ATMHELVEQATGLDFNGFSSREQAAAAMAAAGLEVPEAADSVGRLLNEAFEQRVE 377



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 56/163 (34%), Gaps = 33/163 (20%)

Query: 408 KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
           +         N   ++   +  +  +  ++ D+P      E   +  AH           
Sbjct: 359 EAADSVGRLLNEAFEQ--RVEDSLIQPTFVTDYPV-----ENSPLARAHR---------- 401

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS-------EVMLQAFSNVGISKEVVEN 520
                        +++L   G E A+               E   +  +   +    V+ 
Sbjct: 402 ------SKPGLVERFELFIVGRETANAFSELIDPIDQRRRLEAQQERRAAGDLEAHGVDE 455

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            F     A + GMPP GG+  GIDR+ MLL  + ++R+V  FP
Sbjct: 456 DF---LHALEVGMPPTGGLGIGIDRLAMLLTDSPSIRDVIAFP 495


>gi|326511347|dbj|BAJ87687.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 582

 Score =  193 bits (490), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 66/332 (19%), Positives = 135/332 (40%), Gaps = 30/332 (9%)

Query: 5   RTHSCGDLGVS----DVGSF-----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           RTH+  +L       + G       V ++G +   R  G ++F+ IRD  G  Q+    +
Sbjct: 94  RTHTTKELQERYTHLEDGEVCTEAAVSIAGRIVARRAFGKLVFMTIRDDSGTIQLYCEKE 153

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           S   E  + +++   + +D ++    A         G++ +     EIL+ +  LPLP  
Sbjct: 154 SLTEEQFEQLKAF--IDVDDIL---GASGSIKKTEKGELSVYVNFFEILTKSL-LPLPDK 207

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                    R++ R++D+     +      R+++++ +R  M +  FIE  TP+L  ++ 
Sbjct: 208 YHGLTDVDKRYRQRYIDMIANPEVADVFRTRSKVVSEIRKTMESFGFIEVETPVLQGAAG 267

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+      Q   Y L  A + + + ++  G ++ ++I   FR+E   +   P E
Sbjct: 268 GAEARPFITHHNSLQRDLY-LRIATELHLKRMLVGGLEKVYEIGRIFRNEGISTRHNP-E 325

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  ++M  ++ + + ++N  E ++       +    +      I  +   RR        
Sbjct: 326 FTTIEMYEAYSDYESMMNLAEEIVIRCAMATTGKLKIDYQGTEISLERPWRRE------- 378

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                MH + E     +F  F  + S     +
Sbjct: 379 ----TMHRLVEEATGVDFNSFGDVESAKNAAK 406



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 22/110 (20%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVM---------------LQAFSNVGISKEVVEN 520
           +    +++L   G EI +                                V   +   ++
Sbjct: 467 AGLTERFELFVCGREIGNAFSELTDPIDQRNRFENQIKQHNAKRAAMDKKVKSDESKGDD 526

Query: 521 RFGG-------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +            + + GMPP  G+  GIDR+VMLL  + ++R+V  FP
Sbjct: 527 EYSYEVSLDEDFLTSLEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFP 576


>gi|307354031|ref|YP_003895082.1| aspartyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157264|gb|ADN36644.1| aspartyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 429

 Score =  193 bits (490), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 80/345 (23%), Positives = 137/345 (39%), Gaps = 29/345 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
              ++ GWVH +R  GG+ F  +RD  G  Q       A   +  + R          V+
Sbjct: 13  ETAKVIGWVHEIRDLGGLSFYILRDRTGFLQATIVKKKAPEAVLNAARDVS----RESVV 68

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRFLDLRRDT 137
             S          G  EL  ++ EI+S AE        E+       R   R+LD RR  
Sbjct: 69  MVSGIVKPTEKAPGGRELIPEEFEIISRAETPLPLDVSEKVLAEVDTRIDNRYLDARRPK 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           ++     R+ +  ++   M +E FI  +T  + A++ EG  +    +  ++ +F  L Q+
Sbjct: 129 INSIFSIRSNVTRALYEFMFSEGFINITTSKIVAAATEGGTELFPIAYFDKEAF--LNQS 186

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           PQ YKQ++MA+GFD+ F+I P FR E+  + R   E   +D+E+SF + + ++  +E V+
Sbjct: 187 PQLYKQMMMAAGFDKVFEIGPIFRAEEHNTTRHLNEATSIDVEVSFADHNGVMELLEKVI 246

Query: 258 RGVFEEFSNGNTVS------------NNFLRICYDDAIRR----------YGTDKPDLRN 295
              +                        F ++ Y +AI            YG D      
Sbjct: 247 IAAYGAVEKNCQNEIETLGIEFEVPKTPFPKVTYAEAIDIAAISIDEEISYGDDLSTAAE 306

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
             I   + EH+  +++    K     P  +   I       +   
Sbjct: 307 RAIGDEMGEHYFITDWPTSIKPYYAMPYEDEPEICKAFDLMHPKM 351



 Score =  111 bits (278), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 71/180 (39%), Gaps = 32/180 (17%)

Query: 393 MQDGDSCFFIAGDPLKFCSFAA-DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK 451
            +  D       + + +    +  A   I  E+G       E  +I D+P          
Sbjct: 281 AEAIDIAAISIDEEISYGDDLSTAAERAIGDEMG-------EHYFITDWP---------- 323

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
              +  P+       E          KA  +DL+    E++SG  R H  +++++     
Sbjct: 324 --TSIKPYYAMPYEDE------PEICKA--FDLMHPKMELSSGAQRIHQHDLLVEQIREK 373

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G+S     + F    + F+ GMPPH G   G++R++M +L   N+RE  LFP  ++    
Sbjct: 374 GLSP----DSFEFYLKPFRYGMPPHAGWGLGMERLIMTMLDLPNIREAVLFPRDRHRLTP 429


>gi|262382421|ref|ZP_06075558.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262295299|gb|EEY83230.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 468

 Score =  193 bits (490), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 59/291 (20%), Positives = 107/291 (36%), Gaps = 27/291 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61
            RT     L     G+ V + GWV   R    + F+ + D   I  V    + D    E 
Sbjct: 5   KRTKIVDVLKSDAFGTTVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDVDKLGDEF 64

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K + +   + ++G++     +  N       +E+ A +IEI   A+    P+  +    
Sbjct: 65  LKPITTGASISVNGILTQSQGKGQN-------VEIQATEIEIFGTADPATYPLQKKGHSM 117

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +   L  R +T       R  +  ++        F    TPI+TAS  EGA    
Sbjct: 118 EFLR-EIAHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQMF 176

Query: 182 VPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDED 224
             +  N              +  F+    +     Q +  L A+   + +   P FR E+
Sbjct: 177 QVTTKNLYDLKKDENGSIIYEDDFFGKQASLTVSGQLEGELAATALGQIYTFGPTFRAEN 236

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
             + R   EF+ ++ E++F +  D +   E  ++   +   +       FL
Sbjct: 237 SNTPRHLAEFWMIEPEVAFNDITDNMELAEEFIKYCVQWALDNCMEDIKFL 287



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P     +E K        F M Q         D  +++A  
Sbjct: 343 HERFLVEDHFKRPVILTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 383

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R    + ++     +GI  + +           + G  PH G   
Sbjct: 384 V-LFPKIGEIIGGSEREADYDKLMSRIDELGIPMKDMW----WYLDTRRFGTVPHSGFGL 438

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G  N+R+V  FP + N
Sbjct: 439 GFERLLLFVTGMGNIRDVIPFPRTPN 464


>gi|217962040|ref|YP_002340610.1| asparaginyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229141286|ref|ZP_04269824.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|217068277|gb|ACJ82527.1| asparaginyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228642067|gb|EEK98360.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 463

 Score =  193 bits (490), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 65/353 (18%), Positives = 123/353 (34%), Gaps = 51/353 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCID 74
            G  V++SGW+  +R      F+++ D      V    + +   F+    +     + ++
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V+                E+ A+KI+I  +++    P+  +R   E +R     L  R
Sbjct: 77  GKVIVTPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+   TPI+T S  EGA +    +  +       
Sbjct: 128 TNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVPKG 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E  D++N  E++L+ V +           F                      R
Sbjct: 248 EPEIAFAELGDVMNLTEDMLKYVMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           I Y +AI+       D + P+   +   TEH  +    +F + + V    +  
Sbjct: 308 ITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI 360



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M          +D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMR-------LNDDGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G+     E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMK----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|229161185|ref|ZP_04289172.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228622281|gb|EEK79120.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 432

 Score =  193 bits (490), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 70/279 (25%), Positives = 124/279 (44%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 5   MKRSLTREC----TEHSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               +  E V+ + G ++  S   +        +E+ A ++++L+ AE LP  +  ++  
Sbjct: 60  ---KLEMESVVQVIGEIVETSKTEV-------GVEVLAHEVKVLNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        +  +  S    +   +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKATLAQSFSEYLTENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKVPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEQHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++           L+I
Sbjct: 228 EIGFINDFHEVMQLETDVLRHMFQQVVKNCEKELQLLQI 266



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 61/154 (39%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP         
Sbjct: 297 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTMPNKE------ 339

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
               +     +DL+  G EI SG  R H   ++L +F+  G+       +F      F+ 
Sbjct: 340 ---NTAVTDSFDLLYKGLEITSGAQRIHDYNMLLTSFNEKGLH----SEKFQSYVDTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERVVYKLLQLSNVREASAFPRD 426


>gi|24640851|ref|NP_727353.1| Lysyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|320541906|ref|NP_001188571.1| Lysyl-tRNA synthetase, isoform C [Drosophila melanogaster]
 gi|22832014|gb|AAF46510.2| Lysyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|318069350|gb|ADV37653.1| Lysyl-tRNA synthetase, isoform C [Drosophila melanogaster]
          Length = 607

 Score =  193 bits (490), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 91/577 (15%), Positives = 172/577 (29%), Gaps = 109/577 (18%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G +     + ++G VH +R  G  +IF D+R      QV+A+  S   E       +   
Sbjct: 134 GETLENVKLSVAGRVHAIRESGAKLIFYDLRGEGVKVQVMASAKSYKSEA--DFEIDTSK 191

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++             G++ +   +I++LS      LP        +  R++ R+L
Sbjct: 192 LRRGDIIGVVG--HPGKTKKGELSVMPSEIKLLSPCL-HMLPHLHFGLKDKETRYRQRYL 248

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL   + + +    R +II+ +R  +    F+E  TP++   +        V    +   
Sbjct: 249 DLILNNNVREKFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNDLKM 308

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              +  AP+ Y ++L+  G DR ++I                                  
Sbjct: 309 DLFMRIAPELYHKMLVVGGLDRVYEIG--------------------------------- 335

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
                       +F N      +       +    Y              +  +    +E
Sbjct: 336 -----------RQFRNEGIDLTHNPEFTTCEFYMAYA-------------DYADIMDITE 371

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
             V   + ++   Y+V   P +G  G     D    + R      L            + 
Sbjct: 372 QLVSGMVKAIRGSYKVIYHP-EGPEGPEQELDFTPPFKRVSMIKTL---------EEKLQ 421

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
              P A   N   T     +L  +           P               +E  +    
Sbjct: 422 VKFPAADTFNSPETNQFLSQLCAKH----QVECPAPRTTARLLDKLVGEFIEEFCV---- 473

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
                +I                   +P  M             +     +++L     E
Sbjct: 474 --NPTFI-----------------CEHPQIMSPLAKYHRS----IPGLTERFELFVAKKE 510

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRI 546
           I +     +   V  + F      K   ++           + + G+PP GG   GIDR+
Sbjct: 511 ICNAYTELNDPVVQRERFEQQASDKAAGDDEAQLVDENFCTSLEYGLPPTGGFGMGIDRL 570

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            M L  + N++EV LFP  +        + +  + +Q
Sbjct: 571 AMFLTDSNNIKEVLLFPAMKPEDANRTAAETAPTAQQ 607


>gi|315426572|dbj|BAJ48202.1| aspartyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 440

 Score =  193 bits (490), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 73/304 (24%), Positives = 140/304 (46%), Gaps = 26/304 (8%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSV 65
            GD+     G  V L GWVH +R  G ++F+ +RD  GI QVV      + +  +  K +
Sbjct: 16  AGDVKPELDGRVVNLFGWVHEIRDLGKLVFILLRDVSGICQVVFRMEEVEQSVRDAVKGL 75

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-PLPVFGEREYPESI 124
            +E  + ++G+V+ +    +        +E+  +++ +L  A     L   G+       
Sbjct: 76  TNESAVFVEGVVVKQPRSKL-------GVEVVGKRLTVLGRAVPKLELDPTGKVPAGLDA 128

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R ++R LDLRR  +    +  + ++ +MR     + F+E  TP L  S+ EG  +     
Sbjct: 129 RLRHRILDLRRPEVRAVFLVGSEVLKAMRDFFHMKGFVEVRTPKLIGSATEGGAELFEVK 188

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             ++ ++ A  Q+PQ YK+ L  + F++  +I P FR E   + R   EF  +D+E SF 
Sbjct: 189 YFDRVAYLA--QSPQLYKEQLT-TVFEKVCEIGPYFRAEASHTGRHISEFTSVDIEQSFA 245

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTV------------SNNFLRICYDDAIRRYGTDKPD 292
           +  ++++ +E ++  V +     +                +F R  YD+A+    ++  +
Sbjct: 246 DMYEVMDVLEELVVHVHKHLVENHQHLLQMLGVNLRVPKRHFKRFTYDEALEILRSEGVE 305

Query: 293 LRNP 296
           +R  
Sbjct: 306 MRWG 309



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 5/146 (3%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME-SLKGNDLLSIKAF 480
           + L I+     E  W  DF         KK    +     P       ++  +     + 
Sbjct: 294 EALEILRSEGVEMRWGEDFGTPHLRLLGKKYPTYYFITHFPTESKPFYIQETEKDPRISE 353

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +DL+    E+ASGG R    +V+ +     G++       F    + F  GMP H G  
Sbjct: 354 SFDLMYQWLELASGGTRVSDHDVLERKLREKGLNP----AMFEDHLKVFSYGMPVHAGWG 409

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G +R +M+L    N+RE  LFP  +
Sbjct: 410 LGFERFLMVLTRRTNIRETVLFPRDR 435


>gi|301308376|ref|ZP_07214330.1| asparagine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300833846|gb|EFK64462.1| asparagine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 468

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 59/291 (20%), Positives = 107/291 (36%), Gaps = 27/291 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61
            RT     L     G+ V + GWV   R    + F+ + D   I  V    + D    E 
Sbjct: 5   KRTKIVDVLKSDAFGTTVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDVDKLGDEF 64

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K + +   + ++G++     +  N       +E+ A +IEI   A+    P+  +    
Sbjct: 65  LKPITTGASISVNGILTQSQGKGQN-------VEIQATEIEIFGTADPATYPLQKKGHSM 117

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +   L  R +T       R  +  ++        F    TPI+TAS  EGA    
Sbjct: 118 EFLR-EIAHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQMF 176

Query: 182 VPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDED 224
             +  N              +  F+    +     Q +  L A+   + +   P FR E+
Sbjct: 177 QVTTKNLYDLKKDENGSIIYEDDFFGKQASLTVSGQLEGELAATALGQIYTFGPTFRAEN 236

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
             + R   EF+ ++ E++F +  D +   E  ++   +   +       FL
Sbjct: 237 SNTPRHLAEFWMIEPEVAFNDITDNMELAEEFIKYCVQWALDNCMEDIKFL 287



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P     +E K        F M Q         D  +++A  
Sbjct: 343 HERFLVEDHFKRPVILTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 383

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R    + ++     +GI  + +           + G  PH G   
Sbjct: 384 V-LFPKIGEIIGGSEREADYDKLMTRIDELGIPMKDMW----WYLDTRRFGTVPHSGFGL 438

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G  N+R+V  FP + N
Sbjct: 439 GFERLLLFVTGMGNIRDVIPFPRTPN 464


>gi|325281305|ref|YP_004253847.1| Asparaginyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324313114|gb|ADY33667.1| Asparaginyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 487

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 56/283 (19%), Positives = 110/283 (38%), Gaps = 27/283 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEW 69
           L   D    V +SGWV   R +  + F+ + D   I   Q+V + ++   E+ K V +  
Sbjct: 18  LQSGDCDKEVEISGWVRTKRGNKQVNFIALNDGSTINNIQIVVDMNNISEELMKKVTTGA 77

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + GL++       +        E+ A ++++L  A+    P+  ++   E +R  + 
Sbjct: 78  AIHVKGLLVKSEGSGQSH-------EIQAHELDVLGEADPEKYPIQPKKHSLEFLR-DHA 129

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L  R +        R  +  ++        F    TP++TAS  EGA +    + ++  
Sbjct: 130 HLRFRTNMFGAIFRIRHAMAFAIHQYFDQHGFFYLHTPLITASDCEGAGEMFRVTTLDPK 189

Query: 190 --------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                          F+          Q +  L A    + +   P FR E+  + R   
Sbjct: 190 NPPLTEEGEVDFRQDFFGKATNLTVSGQLEGELGAMALGKIYTFGPTFRAENSNTTRHLS 249

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           EF+ ++ E +F + DD ++  E+ L+ +     +       FL
Sbjct: 250 EFWMIEPEAAFYDLDDNMDLAEDFLKYLIRYALDNCMDDLKFL 292



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 40/120 (33%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD-LVCNGFEIASGGIRNHMSEVMLQA 507
           EK           P+         +         D L     EI  G  R    + ++  
Sbjct: 368 EKHFKKPVILTGYPKEIKAFYMKQNPDGKTVAAMDVLFPQIGEIIGGSQREENYDKLVAR 427

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + VGIS    E          + G   H G   G +R+++ + G  N+R+V  FP +  
Sbjct: 428 MNEVGIS----EESMSYYLDTRRFGSAVHSGFGLGFERLLLFVTGMGNIRDVIPFPRTPK 483


>gi|294783903|ref|ZP_06749225.1| lysine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294479715|gb|EFG27494.1| lysine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 493

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 120/310 (38%), Gaps = 14/310 (4%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + +G +  +R  G + F  I D  G  Q+    D    E    +     +   G ++   
Sbjct: 57  KTAGRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEEFDHIVKMLNV---GDIIGVE 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHK 140
            E    +  T ++ L  + I +L+      LP          IR++ R++DL  +  +  
Sbjct: 114 GELFITH--TEELTLRVKSISLLTK-NVRSLPEKYHGLTDVEIRYRKRYVDLIMNPDVRS 170

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
             +KRT+II ++R  +    F+E  TP++       A    V           L  AP+ 
Sbjct: 171 TFIKRTQIIKAVRKYLDDRGFLEVETPLMHPILGGAAAKPFVTHHNALNLDLFLRIAPEL 230

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF+R +++   FR+E   +   P EF  +++  S    +D+++  E ++  V
Sbjct: 231 YLKKLIVGGFERVYELGRNFRNEGISTRHNP-EFTMIELYQSHANFNDMMDLCEGIISSV 289

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKP------DLRNPIIMHNVTEHFVHSEFRVF 314
            +E +    +  + +++   +  R +  D        D    +      +        V 
Sbjct: 290 CQEVNGTTDIEYDGVQLSLKNFQRVHMVDMIKDVTGVDFWQEMTFEEAKKLAKEHHVEVA 349

Query: 315 SKILSVNPGY 324
             + SV    
Sbjct: 350 DHMDSVGHVI 359



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE ++      +  P       K N+       +++L  N  E A+     +  
Sbjct: 362 FFEQKCEE-RVVQPTFVYGHPVEISPLAKRNEKNPNFTDRFELFINKREYANAFTELNDP 420

Query: 502 EVM-----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                    Q    +  ++E           A + G+PP GG+  GIDR+VMLL GA ++
Sbjct: 421 ADQRGRFEAQVEEALRGNEEATPEIDESFVEALEYGLPPTGGMGIGIDRLVMLLTGAPSI 480

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 481 RDVILFPQMK 490


>gi|229032204|ref|ZP_04188177.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228728984|gb|EEL79987.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 463

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 130/372 (34%), Gaps = 61/372 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCID 74
            G  V++SGW+  +R      F+++ D      V    + +   F+    +     + ++
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSSVKVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V++               E+ A+KI+I  +++    P+  +R   E +R     L  R
Sbjct: 77  GKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+   TPI+T S  EGA +    +  +       
Sbjct: 128 TNAFSATFRVRSVAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVPKG 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E  D+++  E++L+   +           F                      R
Sbjct: 248 EPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           I Y +AI+       D + P+   +   TEH  +    +F + + V    +         
Sbjct: 308 ITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI------- 360

Query: 335 GGNRAFCDRMNE 346
              +AF  RMNE
Sbjct: 361 ---KAFYMRMNE 369



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M           D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMRMNE-------DGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|153005580|ref|YP_001379905.1| asparaginyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152029153|gb|ABS26921.1| asparaginyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 434

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 74/348 (21%), Positives = 119/348 (34%), Gaps = 37/348 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWV 70
               G  V L GW++  R  G + FL +RD  G  Q V    N     F  A  +  E  
Sbjct: 11  AQHEGKEVTLHGWLYNRRSSGKLHFLQVRDGTGTIQCVVFKGNVSPEAFREADHLPQETS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + GLV       I         EL  + +++  VA        G +E+  +   + R 
Sbjct: 71  LTVTGLVKKDERSPI-------GFELDVRDLKV--VALPSQEYPIGHKEHGVAFLMEQRH 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R  +  ++R    A  F     PI T S+ EG            G 
Sbjct: 122 LWLRSQRQQVILRVRHTVEKAIRDFFDARGFTLVDAPIFTPSACEGTSTLFEVPYFELGK 181

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E+++++ D  +
Sbjct: 182 AY-LTQSGQLYMEAA-AMALGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVAYMDLDGDM 239

Query: 251 NTMENVLRGVFE----------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
             ME  +  V +                + S    V   F RI Y +A+         ++
Sbjct: 240 ELMEQFVSHVVQTALEKHRKELVAVLERDVSKLENVKPPFPRITYTEAVDVLQKAGHPMK 299

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
                    +     E  V +K          +    K     +   D
Sbjct: 300 WG-------DDIGGDEETVIAKQYDRPVMVHRYPAEMKAFYFKKDPTD 340



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 58/208 (27%), Gaps = 40/208 (19%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQ--ELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
           DGD             +     R  +    E  +      +      FP   + E    +
Sbjct: 236 DGDMELMEQFVSHVVQTALEKHRKELVAVLERDVSKLENVKP----PFPRITYTEAVDVL 291

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYD---LVCN---------------------G 488
             A +P  M  G      G D  ++ A QYD   +V                       G
Sbjct: 292 QKAGHP--MKWGDDI---GGDEETVIAKQYDRPVMVHRYPAEMKAFYFKKDPTDPKVALG 346

Query: 489 FEIASGGIRNHM-----SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
            ++ +      +      E  L+         ++ +  F       + G  PH G   G+
Sbjct: 347 CDVLAPEGYGEIIGGGERESSLETLEAAIAHHQLPKEAFEWYLDLRRYGTVPHAGFGMGV 406

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R V  + G  +VRE   F         
Sbjct: 407 ERCVAWICGLHHVRETIPFARMMERITP 434


>gi|24214695|ref|NP_712176.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|39932210|sp|Q8F4P5|SYK_LEPIN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|24195684|gb|AAN49194.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 495

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 67/314 (21%), Positives = 123/314 (39%), Gaps = 30/314 (9%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +L G +H  R  G   F  ++D+ GI Q+ A  D          +S  +  I GL     
Sbjct: 55  KLGGRLHSKRVMGKASFAHLKDNSGIIQLYATKDDLGETQYSIFKSLDLGDIIGL----- 109

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFLDLRR 135
            E        G+I L    +E+L+        V  +             R++ R++DL  
Sbjct: 110 -EGYLFKTQKGEITLHVTSVELLAKCIRPLPVVKEKDGVVYDAFADVEQRYRMRYVDLIV 168

Query: 136 D-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           +  +    + R++I++ +R  +  E F+E  TP++   +    AR F+          + 
Sbjct: 169 NDHVRDTFITRSKIVSEIRSFLTQEGFLEVETPMMQPIAGGAAARPFVTHHNTLDMQLF- 227

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  G DR F++   FR+E   +   P EF  ++  M+F +   +L+  
Sbjct: 228 LRIAPELYLKRLIVGGMDRVFELNRNFRNEGISTKHNP-EFTMMEAYMAFGDMSTMLDLT 286

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           E ++  + ++                     +YG D  DL  P       +         
Sbjct: 287 ERLITHLAQKICGTLK--------------IQYGKDLIDLSPPWKRTTYVDIIKEYSGID 332

Query: 314 FSKILSVNPGYEVW 327
           FS+I+S+    +  
Sbjct: 333 FSQIISLEEAKKKA 346



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 70/198 (35%), Gaps = 34/198 (17%)

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP-LKFCSFAADARNHIAQELGIINCNCFE 433
           + K  + ++   I    + +   S   +           A +  +  A+       N  +
Sbjct: 324 IIKEYSGIDFSQIISLEEAKKKASELKVDVSKCQTIWKVADEVFSEKAE------PNLIQ 377

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS-IKAFQYDLVCNGFEIA 492
             +I D+P                        +  L  ++        +++    G EI 
Sbjct: 378 PIFITDYP----------------------KELSPLAKSNPDKPGYVERFEPYVAGREIG 415

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +     +      + F +    +E  ++          RA + GMPP GG+  GIDR+VM
Sbjct: 416 NAFTELNDPFDQKERFEDQVKQREAGDDEAFMMDEDYIRALEYGMPPTGGLGIGIDRLVM 475

Query: 549 LLLGAKNVREVSLFPMSQ 566
           LL  + ++R+  LFP+ +
Sbjct: 476 LLTNSHSIRDTILFPLMR 493


>gi|257468138|ref|ZP_05632234.1| lysyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317062423|ref|ZP_07926908.1| lysyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313688099|gb|EFS24934.1| lysyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 493

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 69/328 (21%), Positives = 130/328 (39%), Gaps = 19/328 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + +G +   R  G  +F  I D  G  Q+    D    E+ + V    V  I G+     
Sbjct: 57  KTAGRIMAYRGKGKTLFAHIEDRTGRIQLYLRKDELGDEVFEMVNKIGVGDIVGV----- 111

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E       TG++ L    I++LS     PLP           R++ R++DL  +   ++
Sbjct: 112 -EGELFVTHTGELTLRVTSIQLLSK-NIRPLPEKFHGLTDVETRYRKRYVDLIMNKEVRD 169

Query: 142 -IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
             +KRT+II  +R  +  + F+E  TP++       A    V           +  AP+ 
Sbjct: 170 TFIKRTQIIKGIRSILDNKGFLEVETPLMHPILGGAAAKPFVTHHNALNVDLYMRIAPEL 229

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  G ++ +++   FR+E   +   P EF  +++  ++ + +D+++  E ++  +
Sbjct: 230 YLKRLIVGGLEKVYELGRNFRNEGMSTRHNP-EFTMIELYQAYADFNDMMDLAEEIITTL 288

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF--SKIL 318
            +E     TV  N   +  ++  R +  D         +  VT      +   F  +K L
Sbjct: 289 AKEVLGTTTVEYNGKTLVLENFKRIHMVDF--------VKEVTGVDFWDQNMTFEEAKAL 340

Query: 319 SVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           +     EV       G     F +   E
Sbjct: 341 AKQHHVEVADHMNSVGHVVNQFFEEKCE 368



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 6/130 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I      F  P       K N+       +++L  +  E A+        
Sbjct: 362 FFEEKCEEK-IVQPTFVFGHPVEISPLAKRNEEDPRFTDRFELFIDAREYANAFSELQDP 420

Query: 502 EVM-----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                    Q       + E           A + G+PP GG+  GIDR++MLL  + ++
Sbjct: 421 ADQRGRFEDQVEEAERGNDEATPVIDDDFVEALEYGLPPTGGMGIGIDRLIMLLTQSDSI 480

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 481 RDVLLFPQMK 490


>gi|326803025|ref|YP_004320843.1| lysine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651480|gb|AEA01663.1| lysine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 500

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 64/335 (19%), Positives = 128/335 (38%), Gaps = 21/335 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           ++D   FV ++G +   R  G   F  I+D  G  Q+    D       K     W    
Sbjct: 58  LADKAVFVNIAGRLMTKRGKGRAGFGHIQDGSGQIQIYVRKDEIG---DKDYVDIWKKAD 114

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +++ S   +  N  TG++ + A++++ L+ A   PLP        +   ++ R LDL
Sbjct: 115 LGDIIAVSGYVMRTN--TGELSVKAEELKHLTKALR-PLPDKYHGLQDKEQIYRQRHLDL 171

Query: 134 RRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +       V R++II+ +R  +    ++E  TP+L        AR F+          
Sbjct: 172 ITNRESYDRFVTRSKIISEIRRFLDQRGYLEVETPVLHNIPGGANARPFVTHHNALDIDL 231

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + + + L+  G ++ ++I   FR+E       P EF  L++  ++ +  D+++
Sbjct: 232 Y-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDHTHNP-EFTLLELYTAYSDMWDVMD 289

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            +E +   +  +     T+     ++ +    RR           + M +  +     +F
Sbjct: 290 LVEELYHHIASQVVGSTTIPYGDHQLDFSGQWRR-----------VHMVDAIKEATGVDF 338

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                        +   +  KG        +   E
Sbjct: 339 WQEMTDEEARQLAKDHHVEVKGTDDFGKVVNEFFE 373



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 65/155 (41%), Gaps = 12/155 (7%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLS 476
           +A++  +      +F  +++  F+E   EE  I       +P ++        + N+  S
Sbjct: 350 LAKDHHVEVKGTDDFGKVVN-EFFETFVEETLIQPTFVYGHPKSISPLA----RANEEDS 404

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCG 532
               +++    G E  +            Q F      +E+ ++           A + G
Sbjct: 405 RFTDRFEAFIAGAEAGNAFTELTDPIDQRQRFEAQVKERELGDDEAQHMDEDFVEALETG 464

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           MPP GG+  GIDR+VM+   + ++R++ LFP  +N
Sbjct: 465 MPPTGGLGIGIDRLVMIFTNSDSIRDILLFPTMRN 499


>gi|198282779|ref|YP_002219100.1| lysyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665818|ref|YP_002424976.1| lysyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198247300|gb|ACH82893.1| lysyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518031|gb|ACK78617.1| lysyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 496

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 66/291 (22%), Positives = 120/291 (41%), Gaps = 22/291 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           RL G +   R  G   F DI+D  G  Q+  + D+   E+    +   +  I G+     
Sbjct: 60  RLGGRLMSRRVMGKASFADIQDQSGRIQLFVSRDNLGEEVYARFKGLDLGDIIGV----- 114

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHK 140
            + I     TG++ L    +++LS A   PLP           RF+ R++DL   +   +
Sbjct: 115 -DGILFRTKTGELSLKVHSLQLLSKALR-PLPEKWHGLADPETRFRQRYVDLIVTEATRR 172

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
               R   + ++R  +    F E  TP++        AR F+        + Y L  AP+
Sbjct: 173 TFQIRAETVAALRDGLRQRGFYEAETPMMQPVPGGATARPFVTHHHALDMTLY-LRIAPE 231

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G ++ F+I   FR+E   +   P EF  L+   ++ +    ++  E ++R 
Sbjct: 232 LYLKRLVVGGIEQVFEINRNFRNEGISTRHNP-EFTMLEWYEAYADHVRAMDLTETLIRA 290

Query: 260 VFEEFSNGNTVSNN---------FLRICYDDAIRRYGTD--KPDLRNPIIM 299
             +       +S           F R+   +++R +  D    DLR+P ++
Sbjct: 291 AAQAALGTTAISYQGLEIDLGKPFHRLTVTESVRAHNPDLADADLRDPAVL 341



 Score =  100 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +         P       + NDL      +++L+  G E+A+G    +  E     F
Sbjct: 371 EGHLQQPTFITEYPLEVSPLARRNDLDPEVTDRFELMIAGRELANGFSELNDPEDQSARF 430

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                +K+  +           RA + GMPP  G+  GIDR+VMLL    ++REV LFP
Sbjct: 431 RAQVEAKDAGDEEAMFFDADYIRALEYGMPPTAGVGLGIDRLVMLLADQPSIREVILFP 489


>gi|195350522|ref|XP_002041789.1| GM11355 [Drosophila sechellia]
 gi|194123594|gb|EDW45637.1| GM11355 [Drosophila sechellia]
          Length = 574

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 91/577 (15%), Positives = 174/577 (30%), Gaps = 109/577 (18%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G +     + ++G VH +R  G  +IF D+R      QV+A+  S   E      ++   
Sbjct: 101 GETLENVKLSVAGRVHAIRESGAKLIFYDLRGEGVKVQVMASAKSYKSEA--DFETDTSK 158

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++             G++ +   +I++LS      LP        +  R++ R+L
Sbjct: 159 LRRGDIIGVVG--HPGKTKKGELSVMPSEIKLLSPCL-HMLPHLHFGLKDKETRYRQRYL 215

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL   + + +N   R +II+ +R  +    F+E  TP++   +        V    +   
Sbjct: 216 DLILNNKVRENFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNDLKM 275

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              +  AP+ Y ++L+  G DR ++I                                  
Sbjct: 276 DLFMRIAPELYHKMLVVGGLDRVYEIG--------------------------------- 302

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
                       +F N      +       +    Y              +  +    +E
Sbjct: 303 -----------RQFRNEGIDLTHNPEFTTCEFYMAYA-------------DYADIMDITE 338

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
             V   + ++   Y++   P +G  G     D    + R      L            + 
Sbjct: 339 QLVSGMVKAIRGSYKIIYHP-EGPEGPEQELDFTPPFKRVSMIKTL---------EEKLQ 388

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
              P A   N   T     +L  +           P               +E  +    
Sbjct: 389 VKFPAADTFNSPETNQFLSQLCAKH----QVECPAPRTTARLLDKLVGEFIEEFCV---- 440

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
                +I                   +P  M             +     +++L     E
Sbjct: 441 --NPTFI-----------------CEHPQIMSPLAKYHRS----IPGLTERFELFVAKKE 477

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRI 546
           I +     +   V  + F      K   ++           + + G+PP GG   GIDR+
Sbjct: 478 ICNAYTELNDPVVQRERFEQQASDKAAGDDEAQLVDENFCTSLEYGLPPTGGFGMGIDRL 537

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            M L  + N++EV LFP  +        + +  + +Q
Sbjct: 538 AMFLTDSNNIKEVLLFPAMKPEDANRTAAETAPAAQQ 574


>gi|188584759|ref|YP_001916304.1| lysyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349446|gb|ACB83716.1| lysyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 489

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 68/354 (19%), Positives = 128/354 (36%), Gaps = 33/354 (9%)

Query: 6   THSCGDLGVS-----DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-- 58
           T+   ++  +     +    V LSG +   R HG   F  I+D  G  Q+    D+    
Sbjct: 33  TYYAQEVKDNYEQLLETKEEVSLSGRIMAKRGHGKAGFAHIQDSSGQVQIYTRVDNVGEE 92

Query: 59  -FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            +E+ K +    ++ + G V              G+I +  ++  + S +   PLP    
Sbjct: 93  DYELYKELDIGDIIALKGPVFMTRK---------GEITVEVKEFHLQSKSLR-PLPEKWH 142

Query: 118 REYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPE 175
                 +R++ R+LDL  +  +    V R++II  MR  +    F E  TP L T     
Sbjct: 143 GLKDVDLRYRKRYLDLIMNQDVKDTFVIRSKIIREMRRYLDDRGFFEMETPTLHTIPGGA 202

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F       +   Y +  A + + + L+  GFD+ +++   FR+E   +   P EF 
Sbjct: 203 NARPFKTYHNALEMKLY-MRIATELHLKRLIVGGFDKVYELGRIFRNEGISTKHNP-EFT 260

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            +++  S  +  D++   EN++  +  +      V      I +     R          
Sbjct: 261 SIELYQSNSDYHDMMELTENMIYEIANKIFGTPVVEYQGTNIDFTPPWPRK--------- 311

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
              M +  +     +F   +   +     +      K      A  +   E   
Sbjct: 312 --TMIDAVKEATGIDFSELNHEKAREKAEQAGIEVEKDATWGEALNEIFEEKVE 363



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 4/105 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
           K ++  S   ++++    G EIA+     +      + F +    ++  +          
Sbjct: 384 KRHEEDSRLTYRFEGFLWGSEIANAFTELNDPRDQRERFESQVEKRDAGDEEAHMMDEDF 443

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             A + GMPP GG+  GIDR+VM +  + ++R+V LFP  +   D
Sbjct: 444 VEALEYGMPPTGGLGIGIDRLVMFMTNSTSIRDVILFPTMRPKQD 488


>gi|282898480|ref|ZP_06306470.1| Asparaginyl-tRNA synthetase, class IIb [Raphidiopsis brookii D9]
 gi|281196646|gb|EFA71552.1| Asparaginyl-tRNA synthetase, class IIb [Raphidiopsis brookii D9]
          Length = 463

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 77/366 (21%), Positives = 138/366 (37%), Gaps = 53/366 (14%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC 58
           M  +R  +   L  S     + + GWV   R   G  FL+I D   +   Q+V N D   
Sbjct: 1   MIEHRIATI--LRSSQPEETLVVRGWVRTKRELKGFTFLEINDGSCLANLQIVINQDLPQ 58

Query: 59  FE-IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           ++ I K + +   + + G++++   +         +IEL A+ +++   A+    P+  +
Sbjct: 59  YQTIIKQINTGASVEVGGVLVASQGKG-------QRIELKAEGVKVYGDADPETYPLQKK 111

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           R   E +R     L  R ++       R     ++        F+   TPILTAS  EGA
Sbjct: 112 RHSFEFLR-SIAHLRSRTNSFGAVFRVRNACATAIHQFFQQRGFMWVHTPILTASDCEGA 170

Query: 178 RDFLVPSRVNQGS--------------FYALPQ---APQQYKQLLMASGFDRYFQIAPCF 220
            +    + +N                 F+  P       Q +  +MA  F   +   P F
Sbjct: 171 GELFSVTSLNLKDIPRKENQEVDYSQDFFGKPTYLTVSGQLEAEIMAMAFTNVYTFGPTF 230

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS--------- 271
           R E+  + R   EF+ ++ EM+F + +  +N  E+ L+ +F                   
Sbjct: 231 RAENSHTSRHLAEFWMVEPEMAFCDLEGDMNLAEDFLKHIFRYVMENCEQDMEFFNERID 290

Query: 272 ------------NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKI 317
                       N F R+ Y DAI+     +     P+   +   +EH  +   ++F K 
Sbjct: 291 NTVLETAENIVNNQFERLTYTDAIQMLEKAEVKFDYPVEWGLDLQSEHERYLAEQLFKKP 350

Query: 318 LSVNPG 323
           + V   
Sbjct: 351 VIVTDY 356



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 49/139 (35%), Gaps = 26/139 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +   + D+P                 F M          ND  +++A   D++     EI
Sbjct: 349 KPVIVTDYP------------AQIKAFYMK-------LNNDEKTVRAM--DILAPKIGEI 387

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    +++ +     G+  E +           + G  PH G   G +R+V  + 
Sbjct: 388 IGGSQREERLDILERRVLAQGMKPEDLW----WYLDLRRYGTVPHAGFGLGFERLVQFMT 443

Query: 552 GAKNVREVSLFPMSQNFCD 570
           G  N+R+V  FP +    +
Sbjct: 444 GMGNIRDVIPFPRTPQSAE 462


>gi|282878146|ref|ZP_06286943.1| asparagine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299724|gb|EFA92096.1| asparagine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 489

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 56/292 (19%), Positives = 111/292 (38%), Gaps = 28/292 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE 60
             RT     L  +D G  V + GWV   R    + F+ + D   I   Q+V +P     +
Sbjct: 26  MKRTKVVDVLKSTDFGKEVVVKGWVRTHRSSKAVDFIALNDGSTIKNIQIVVDPSKINAD 85

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             KS+ +   LC+ G ++    +  +       +E+  Q IE+  +           +  
Sbjct: 86  TLKSITTGACLCVTGTLVESQGKGQS-------VEIQCQDIEVYGLCGSDYPMQKKGQ-- 136

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
                 ++  + LR +T    +  R  +  ++        F    TP++TAS  EGA + 
Sbjct: 137 SFEYMRQHAHMRLRTNTFGAVMRIRHNMAFAIHQYFHEHGFFYFHTPLITASDAEGAGEM 196

Query: 181 LVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDE 223
              +  N              +  F+    +     Q +  L A+   + +   P FR E
Sbjct: 197 FQVTTQNLNDLKKGEDGKVSYEDDFFGKMTSLTVSGQLEGELGATALGQIYTFGPTFRAE 256

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +  + R   EF+ ++ E++F+   D+++  E+ ++       +      +FL
Sbjct: 257 NSNTPRHLAEFWMIEPEIAFIALPDLMDLEEDFIKYCVRWALDNCKDDLDFL 308



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 12/146 (8%)

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHN---PFTMPQGGME----SLKGNDLLSIKAFQ 481
            N  +F + + +   +   E ++    H+   P  M     E     +K N+        
Sbjct: 345 ANGHKFEFPVSWGM-DLASEHERFLVEHHFKKPVIMYDYPKEIKAFYMKINEDGKTVQGT 403

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G +R    E +        I  + +           + G  PHGG   
Sbjct: 404 DVLFPQIGEIIGGSVREESLEKLTSEIERRHIPMKDMW----WYLDTRKYGTCPHGGFGL 459

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G +N+R+V  FP +  
Sbjct: 460 GFERLILFVTGMQNIRDVIPFPRTPK 485


>gi|229163550|ref|ZP_04291500.1| Asparaginyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619932|gb|EEK76808.1| Asparaginyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 463

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 130/372 (34%), Gaps = 61/372 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCID 74
            G  V++SGW+  +R      F+++ D      V    + +   F+    +     + ++
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSSVKVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V++               E+ A+KI+I  +++    P+  +R   E +R     L  R
Sbjct: 77  GKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+   TPI+T S  EGA +    +  +       
Sbjct: 128 TNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVPKG 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E  D+++  E++L+   +           F                      R
Sbjct: 248 EPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           I Y +AI+       D + P+   +   TEH  +    +F + + V    +         
Sbjct: 308 ITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI------- 360

Query: 335 GGNRAFCDRMNE 346
              +AF  RMNE
Sbjct: 361 ---KAFYMRMNE 369



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M           D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMRMNE-------DGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|315303833|ref|ZP_07874321.1| asparaginyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313627794|gb|EFR96439.1| asparaginyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 430

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 79/319 (24%), Positives = 125/319 (39%), Gaps = 34/319 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+   R  G I FL +RD  G  Q   V A      F  AK++  E  L +
Sbjct: 12  VGKEVTIGVWLANKRSSGKIAFLQLRDGTGFMQGVVVKAEVGDEVFATAKALTQETSLFV 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +             EL+   +E++S + + P+     +E+       +R L L
Sbjct: 72  TGTINEDTRSPF-------GYELAVSGVEVISESNDYPITP---KEHGTEFLMDHRHLWL 121

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +       E F++   PILT S+PEG  +        + +F  
Sbjct: 122 RSSRQHAIMKIRNEIIRATYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAF-- 179

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +D L   
Sbjct: 180 LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLKVQ 238

Query: 254 ENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAI---RRYGTDKPDLRN 295
           EN +  + +   +   +                  F RI Y +AI    + G D     +
Sbjct: 239 ENYVAFLVKAVLDNCRLELDRLGRDISHLEKMVAPFPRITYTEAIDLLHKLGFDDIVWGD 298

Query: 296 PIIMHNVTEHFVHSEFRVF 314
                + T      E  VF
Sbjct: 299 DFGAPHETAIADSFEKPVF 317



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 46/124 (37%), Gaps = 14/124 (11%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN--GFEIASGGIRNHM 500
           +E          A  PF MP+        ND + + A   D++      EI  G  R H 
Sbjct: 312 FEKPVFITHYPKAIKPFYMPED-----PENDQVVLCA---DMIAPEGYGEIIGGSERIHD 363

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            E +     +  +     +  +       + G  PH G   G++R V  + G ++VRE  
Sbjct: 364 LETLQARMKDFDLD----QEAYSWYIDLARYGSVPHSGFGLGLERTVAWISGTEHVRETI 419

Query: 561 LFPM 564
            FP 
Sbjct: 420 PFPR 423


>gi|156938222|ref|YP_001436018.1| aspartyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|156567206|gb|ABU82611.1| aspartyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 453

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 82/309 (26%), Positives = 138/309 (44%), Gaps = 20/309 (6%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +YR     ++     G  VR++GWVH VR  G + FL +RD  G  QV         E  
Sbjct: 2   KYRDLLVAEITPEMEGRRVRVAGWVHAVRSIGKLAFLILRDFSGTIQVTFRVPKDVSEEE 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINA----NIITGQIELSAQKIEILSVAE-ELPLPVFGE 117
           K    E +  +  +        +            +ELS ++IE+L+ A+  LPL V G+
Sbjct: 62  KKRYKELIKKVSKIPPESVVMVVGVVRRDPRAPRGVELSGEEIEVLNEAKSPLPLDVSGK 121

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +     R   R +DLRR      +   +    ++R  + + NF+E  TP + AS  EG 
Sbjct: 122 VDAHIDTRLANRPIDLRRPESQAVLRLVSLSAKAIREYLYSLNFVEVFTPKIIASGTEGG 181

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
              +      + ++ A  Q+PQ YK+LL +S  +  F+IAP +R E+  +     EF  +
Sbjct: 182 AQLVPVFYFGKTAYLA--QSPQLYKELLTSS-LEYVFEIAPAWRHEESDTPYHLAEFISV 238

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSN------------GNTVSNNFLRICYDDAIRR 285
           D+EM+F + +D++  +ENV++ V +   N               V+    RI Y +A   
Sbjct: 239 DVEMAFADYNDVMKVLENVVKRVIDSVKNEGRKWLEVLGHEPPEVNLPIPRITYKEAWEI 298

Query: 286 YGTDKPDLR 294
              +  ++ 
Sbjct: 299 LKAEGVEVE 307



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 55/135 (40%), Gaps = 18/135 (13%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
           F +I D+P                PF   +GG E + G ++    +  +DL     EI+S
Sbjct: 334 FYFITDWP------------ADVRPFYTKRGGKEVIGGKEVD--LSESFDLNWRHLEISS 379

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  R H    + +     G++       F    + +  GMPPH G   G+ R+++ + G 
Sbjct: 380 GSTRIHRRNELEEELKKRGLNP----ANFEWYLKWYDYGMPPHAGWGMGLQRLMVPVAGI 435

Query: 554 KNVREVSLFPMSQNF 568
            NVR  S FP     
Sbjct: 436 PNVRLASTFPRDMKR 450


>gi|257460079|ref|ZP_05625183.1| lysyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442520|gb|EEV17659.1| lysyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 497

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 69/302 (22%), Positives = 123/302 (40%), Gaps = 19/302 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
              D         V L+G +   R  G   F +I D  G  Q+  + DS   E     + 
Sbjct: 44  YIKDTEDKKASEEVSLAGRLKLKRVAGKSTFANIEDQSGNIQIYYSRDSIGEEDYAKFKK 103

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
              L +  +++ R          TG+  + A KI + S A   PLP          +R++
Sbjct: 104 N--LEVGDIILVRG---YAFVTQTGEFSIHASKITLASKA-ICPLPEKFHGLVDIEMRYR 157

Query: 128 YRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSR 185
            R+LD+  +  + ++ +KR+ I++ +R       F+E  TP++   +    A+ F+    
Sbjct: 158 QRYLDMIMNPEVREDFIKRSIIVSEIRSFFEKHGFLEVETPMMHPIAGGANAKPFITHHN 217

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ Y + L+  G +  F+I   FR+E       P EF  ++   ++ +
Sbjct: 218 ALDVDRY-LRIAPELYLKRLVVGGMEAVFEINRNFRNEGMDLTHNP-EFTSIEFYWAWHD 275

Query: 246 QDDILNTMENVLRGVFEEFS---------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
            +D +N  E + + +F+                 S  F RI Y DA+ + G  +P + N 
Sbjct: 276 YNDAMNLTEELFKALFKRLRLGEILTYDEREIDFSKPFARIKYLDALTQIGGIEPQIVND 335

Query: 297 II 298
             
Sbjct: 336 RE 337



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 53/158 (33%), Gaps = 27/158 (17%)

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               ++ +      +        +I+DFP             + +P +        +   
Sbjct: 356 LGHLQSELFD--NYVEAKLINPTFIVDFP------------ISISPLSRRSDENPQI--- 398

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV----GISKEVVENRFGGLYRA 528
                 A +++L   G E+A+     +        F           +          RA
Sbjct: 399 ------AERFELYIAGKELANAFNELNDPLDQYARFKAQIDAKNAGDDEAHEMDEDYVRA 452

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
               MPP  G   GIDR+ M+LL  K++R+V LFP  +
Sbjct: 453 LSYAMPPTTGWGLGIDRLAMILLNKKSIRDVILFPAMR 490


>gi|254513974|ref|ZP_05126035.1| lysyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219676217|gb|EED32582.1| lysyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 499

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 70/323 (21%), Positives = 132/323 (40%), Gaps = 36/323 (11%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G L             +      ++G + R R      FL I+D  G  Q+  + 
Sbjct: 42  RTATAGQLQQDFAEEEKAALEERNEEFAVAGRLIRNRG----AFLLIQDGEGQIQLYVDR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                E   S++S  +    G +++       +    G + ++ ++  +L+ A   PLP 
Sbjct: 98  KGLSEETLASIKSWDL----GDIVAARGPLHRSG--KGDLYINMREARLLTKALR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R++DL  +   +     R+R+I+ +R  M   +F+E  TP++    
Sbjct: 151 KYHGLADQELRYRQRYVDLIVNERSREVFRIRSRVISYIRKFMDGRDFMEVETPMMQPIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+        + Y L  AP+ Y + L   GF+R ++I   FR+E   +   P 
Sbjct: 211 GGAAAKPFVTHHNALDLTMY-LRIAPELYLKRLTVGGFERVYEINRNFRNEGLSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAI 283
           EF  L+   ++ +  D ++  E++LRG+ +E                S  F R+   +AI
Sbjct: 269 EFTMLEYYWAYADYQDAMDLTEHMLRGLTQEVLGSQQVNYQGQVFDFSQPFARMTVTEAI 328

Query: 284 RRYGT--DKPDLRNPIIMHNVTE 304
             Y       D+    +   V E
Sbjct: 329 LAYNPSLSMADIAERELARRVAE 351



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 56/330 (16%), Positives = 101/330 (30%), Gaps = 30/330 (9%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F++  D +     +++ +      G   +  F+       +  Y    P+L    +    
Sbjct: 192 FMDGRDFMEVETPMMQPI-----PGGAAAKPFVTHHNALDLTMYLRIAPELYLKRLTVGG 246

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            E          ++ LS     E   +       +      + E         L  +   
Sbjct: 247 FERVYEINRNFRNEGLSTRHNPEFTMLEYYWAYADYQDAMDLTEHM-------LRGLTQE 299

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA--RNHI 420
           +  S  V   G V           +   +   +         +       A       H 
Sbjct: 300 VLGSQQVNYQGQVFDFSQPFARMTVTEAILAYNPSLSMADIAERELARRVAEGLGIEVHT 359

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           +  LG I    FE               E +++        P       + ND       
Sbjct: 360 SWGLGKIQIEIFE------------KTAEHRLEQPTFITAYPTEVSPLARRNDDDPFVTD 407

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPH 536
           +++    G E+A+G    + +E   Q F +    K+  +           RA + GMPP 
Sbjct: 408 RFEFFVAGRELANGFSELNDAEDQAQRFKDQVAQKDAGDEEAMHFDADYVRALEYGMPPT 467

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 468 AGEGIGIDRLVMLLTDSPSIRDVLLFPHMR 497


>gi|217077587|ref|YP_002335305.1| lysyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|226736755|sp|B7ID87|SYK_THEAB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|217037442|gb|ACJ75964.1| lysyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 502

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 65/334 (19%), Positives = 136/334 (40%), Gaps = 24/334 (7%)

Query: 5   RTHSCGDLGVS----DVGSF-----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           +THS  D+       + G       V  +G +  +R HG   F  I+D +G  Q     D
Sbjct: 30  KTHSSQDIKAQFENLNPGEVKEDASVSTAGRIMSLRHHGKSAFFHIKDFFGRIQAYIRQD 89

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               ++ +  +    +   G ++        +   TG++ +  ++IE+L+     P+P  
Sbjct: 90  IVGKDVYEFFKEHIAI---GDIVGVKGSVFKSK--TGEVTILVKEIELLNKPLR-PMPEK 143

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASS 173
                 + + ++ R++D+   D        R  II  +R  + ++ FIE  TPIL   + 
Sbjct: 144 WHGIKDKEVLYRQRYVDMIANDETLNRFRIRFEIIKLIREFLNSKGFIEVETPILEYVTG 203

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+    V     Y +  A + Y +  +  GF++ +++   FR+E       P E
Sbjct: 204 GASARPFITHLNVFDIDMY-MRIATELYLKRFIVGGFEKVYELGKNFRNEGLSYKHHP-E 261

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ + +D++N  E +   + E+      V    + I +    R     +  +
Sbjct: 262 FTSIEIYQAYADYEDMMNLTEELFVFIVEKLFGTTKVKYQDIEIDFSRPWR-----RVKM 316

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           R+ I  H   +    +E ++   +   +   E+ 
Sbjct: 317 RDFIKEHLGVDILEDTEEKMLEVLKQHDVEVEIK 350



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 6/96 (6%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYR 527
            D       +++L+  G E+A+     +      + F      +E  +           R
Sbjct: 389 EDPR--VTERFELIIYGREMANAFSELNDPVDQYERFLRQAKLREAGDEEAQMMDKDFVR 446

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  +  +R+V  FP
Sbjct: 447 ALEYGMPPTGGLGIGIDRLVMLLTNSPTIRDVIAFP 482


>gi|313679937|ref|YP_004057676.1| lysyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152652|gb|ADR36503.1| lysyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 498

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 63/295 (21%), Positives = 127/295 (43%), Gaps = 23/295 (7%)

Query: 2   HRY-RTHSCGDLGVSDVG---------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           +RY +TH    +  +  G           VR++G +  +R  G + F  + D  G  Q+ 
Sbjct: 28  YRYEKTHDAAQILEAHAGAAPEQAWPEERVRVAGRLVSLRRMGKVTFAHLLDESGRIQLY 87

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
            + D    E  + ++   +  I G      AE       TG++ ++ ++ + L  A   P
Sbjct: 88  LSRD--ATEQYRLLKKLDIGDIVG------AEGTVFTTKTGEVTVAVERWQPLVKALR-P 138

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT 170
           LP        + +R++ R+LDL  +   +++ + R R++  +R  +    F+E  TP++ 
Sbjct: 139 LPDKWHGIKDKEVRYRQRYLDLIVNPEVRDVFRTRARVVRHIRRFLEERGFLEVETPVIL 198

Query: 171 ASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
            ++    AR F          F  L  + +   + L+  GF++ F++   FR+E   +  
Sbjct: 199 PTAGGTEARPFKTFHNALAHEF-ELRISLELPLKKLLVGGFEKVFELGRVFRNEGIDAQH 257

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            P EF  L+   ++ +  D+    E +L  + +E + G T++     I +    R
Sbjct: 258 NP-EFTMLEAYWAYADYQDMAEMTEAMLSSLVQELTGGYTLAYQGRTIDFTPPFR 311



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 58/159 (36%), Gaps = 16/159 (10%)

Query: 413 AADARNHI-AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP-FTMPQGGMESLK 470
               R    A+   +I    ++     D  F  + EEE      H+P F      + S  
Sbjct: 332 LDRLRIWADAKHPELIEVPSYKLL---DKLFELYVEEE-----LHDPTFVFDFPAVISPL 383

Query: 471 GNDLLS--IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GG 524
                       ++DL   G E+A      +      + F      +E  +         
Sbjct: 384 AKKHREREGLTERWDLFVAGMELAPAYSELNDPLDQRERFEEQARRREGGDEEAHRVDED 443

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              A + GMPP GG+  GIDR+ M+L    ++R+V LFP
Sbjct: 444 FLTALEHGMPPAGGMGLGIDRLTMILADQPSIRDVILFP 482


>gi|312879332|ref|ZP_07739132.1| asparaginyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310782623|gb|EFQ23021.1| asparaginyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 434

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 76/349 (21%), Positives = 124/349 (35%), Gaps = 33/349 (9%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LC 72
             G  V L GW++  R  G I FL IRD  G  Q V    +   E  ++ +  W+   + 
Sbjct: 14  HEGQEVTLKGWIYNKRSSGKIHFLQIRDGSGFIQGVMERTAVPEETFQAAKGLWIEASVE 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V                 ELS   + +  V+  +      ++E+        R L 
Sbjct: 74  VRGTVRRDER-------APSGFELSVSDLVV--VSNPVEEYPITKKEHGIDFLLDNRHLW 124

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       +  R R+I S R  +    F+   +PILT S  EGA         +QG  Y
Sbjct: 125 LRSHRQQAILKIRDRVILSCRTYLHDRGFLLVDSPILTGSIGEGADGLFELDYFDQGKAY 184

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q  Q Y +   A+ + R +   P FR E  ++ R   EF+ ++ E +F +  D +  
Sbjct: 185 -LAQTGQLYLEAA-AAAYGRVYCFGPTFRAEKSKTRRHLTEFWMIEPEAAFFDHKDNMAL 242

Query: 253 MENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRYGTDKPDLRNPI 297
            E+++  V  +                         F  I YD+A+        D+    
Sbjct: 243 QEDLVCHVVAQVLEHCRPELAFLERDTSLLERIVPPFPHITYDEAVGILQKLGSDIPYGD 302

Query: 298 IM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                + T      E  VF +        + + +       +   CD +
Sbjct: 303 DFGGDDETLLTQQFEKPVFVECYPKG--VKAFYMKQHPEREDLVLCDDL 349



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 14/125 (11%)

Query: 443 YEWNEEEKKIDFAHNPFTM-PQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           +E     +        F M      E L   +DLL+ + +         EI  G  R   
Sbjct: 316 FEKPVFVECYPKGVKAFYMKQHPEREDLVLCDDLLAPEGYG--------EIIGGSQREDD 367

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            + +L       +     E  +       + G  PH G   GI+R+V  + G +++RE  
Sbjct: 368 LDRLLGRIREQKLP----EESYSWYLDQRRFGSFPHSGFGMGIERLVAWICGLQHIREAI 423

Query: 561 LFPMS 565
            +P +
Sbjct: 424 PWPRT 428


>gi|163803525|ref|ZP_02197394.1| lysyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159172660|gb|EDP57513.1| lysyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 510

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 63/294 (21%), Positives = 129/294 (43%), Gaps = 29/294 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIAKSVRSEWVL 71
           +  +   V ++G +   R      FL I++  G  Q  A+        E  + +    ++
Sbjct: 66  LEALNHVVSIAGRIMAKRGP----FLVIQETSGRIQAYADKAVQKVLKEKYQGLDIGDII 121

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G + ++ ++ E+L+ A   PLP        + +R++ R++
Sbjct: 122 GVKGALHKSGK---------GDLYVNMEEFELLTKALR-PLPEKFHGLTDQEMRYRQRYV 171

Query: 132 DLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +   +   V R+++++++R  MI++ F+E  TP++        AR F+        
Sbjct: 172 DLIVNEDSRQAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDM 231

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+
Sbjct: 232 PMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDL 289

Query: 250 LNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
           ++  E +L  + +E     ++            + R+   +AI+ Y  D   ++
Sbjct: 290 MDLTEELLSSIAQEVLGSTSMPYGDDTVEFGGTYTRMSMFEAIKHYNPDHAQIQ 343



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 386 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 445

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP 
Sbjct: 446 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTDTHTIRDVILFPA 505

Query: 565 SQ 566
            +
Sbjct: 506 MR 507


>gi|33862174|ref|NP_893735.1| lysyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
 gi|39932077|sp|Q7UZP0|SYK_PROMP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33634392|emb|CAE20077.1| Lysyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
          Length = 512

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 83/349 (23%), Positives = 138/349 (39%), Gaps = 27/349 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEI-AKSVRSEWV 70
              D    V ++G V   R  G I F  I D  G  Q+         FEI AK +  E +
Sbjct: 45  NGQDFNLDVAIAGRVLAKRVMGKIAFYTIADQEGKIQLYLEKKILDDFEIHAKLLSFEDL 104

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             I  +               G++ +   K E+LS + + PLP           R++ R+
Sbjct: 105 KEIVDIGDWIGVYGTIKKTNKGELSIKVSKWEMLSKSLQ-PLPDKWHGLTDIEKRYRQRY 163

Query: 131 LDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQ 188
           LDL  + L KN+ K R + I+ +R  +  +NF+E  TPIL + +    AR F+       
Sbjct: 164 LDLIVNPLSKNVFKTRAKCISLIRRWLDEKNFLEIETPILQSEAGGAEARPFITHHNTLD 223

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  A + + + ++  GF++ +++   FR+E   +   P EF  +++  +F    D
Sbjct: 224 IPLY-LRIATELHLKRMVVGGFEKVYELGRIFRNEGISTKHNP-EFTSVEIYQAFSNYID 281

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEH 305
           ++N  E+++R +                 C D  I  Y     D   P   I M +V   
Sbjct: 282 MMNLTEDLIRDIVLS--------------CCDSLIINYQEKVIDFSKPWKRISMKDVVME 327

Query: 306 FVHSEFRVFSKILS---VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           +   +F  F+  L+    +       I  K     R   +   E   SQ
Sbjct: 328 YTGIDFDSFNGDLNKAMKDLEESNIEISPKINTLGRLLNEVFEEKVESQ 376



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 58/157 (36%), Gaps = 27/157 (17%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           +      N + +E   +     E  +++D+P               +P   P    + + 
Sbjct: 359 NTLGRLLNEVFEE--KVESQLVEPTFVIDYP------------IEISPLARPHPENKEM- 403

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLY 526
                     +++L   G E+A+            +        ++  +           
Sbjct: 404 --------VQRFELFIAGRELANAFSELIDPVDQRKRMQLQQSLRDAGDLEAHCIDEDFL 455

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +A + GMPP GG+  GIDR++MLL  + ++R+V  FP
Sbjct: 456 QALEIGMPPTGGLGIGIDRLIMLLTNSPSIRDVITFP 492


>gi|295397836|ref|ZP_06807900.1| lysine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973933|gb|EFG49696.1| lysine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 506

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 66/351 (18%), Positives = 133/351 (37%), Gaps = 24/351 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y  +    L  +++   V ++G +   R  G   F +I+D  G  Q+    D    E 
Sbjct: 54  KKYEAYDKAQL--AEMDDVVAIAGRLVTKRGKGKAGFGNIQDMSGNIQIYVRRDHIDEED 111

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
              +   W     G ++      +  N  TG++ + A K   L+ A   PLP        
Sbjct: 112 YDHL---WKKADLGDIVGVEGTLMRTN--TGELSVKATKFVHLTKALR-PLPDKYHGLTD 165

Query: 122 ESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
               +++R+LDL  +    +   KR++II  +R  + + +++E  TP+L   +    AR 
Sbjct: 166 VEQIYRHRYLDLIANRESFDRFTKRSQIIREVRHYLDSNDYLEVETPVLHNIAGGASARP 225

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A + + + L+  G +R ++I   FR+E   +   P EF  L++
Sbjct: 226 FITHHNALDMELY-LRIALELHLKRLVVGGMERVYEIGRVFRNEGIDTTHNP-EFTMLEV 283

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  D+++ +E + + V E+     +       I YD      G         + M
Sbjct: 284 YTAYSKMTDVMDLVEGLFQSVAEKVLGTTS-------ITYDGQAIELGGKWRR----VHM 332

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG-GGNRAFCDRMNEWAR 349
            +  +     +F             +   +  +          +   E+  
Sbjct: 333 VDAVKEVSGVDFWQEMTDEEARAIAKEHHVQVENNFTVGHVINEFFEEFVE 383



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 10/156 (6%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEE--KKIDFAHNPFTMPQGGMESLKGNDLL 475
             IA+E  +   N F    +++  F E+ E+   +      +P  +    +     +D  
Sbjct: 354 RAIAKEHHVQVENNFTVGHVINEFFEEFVEDTLIQPTFVYGHPTAISP--LARKNEDDPR 411

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                ++++   G E  +            + F      K    +           A + 
Sbjct: 412 --FTDRFEVFIVGSESGNAFTELTDPIDQRERFEAQVKEKAEGNDEAHPLDEEFLEALET 469

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           GMPP GG+  GIDR+VMLL  A+++R+V LFP  +N
Sbjct: 470 GMPPTGGLGIGIDRMVMLLTDAQSIRDVLLFPTMRN 505


>gi|90417431|ref|ZP_01225355.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90330765|gb|EAS46040.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 497

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 71/334 (21%), Positives = 136/334 (40%), Gaps = 34/334 (10%)

Query: 7   HSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           HS  +L              +G  V ++G V R R      F+ ++D  G  Q+    ++
Sbjct: 37  HSAAELQTGFGEETKEALEQLGKVVSVAGRVIRNRG----AFIVVQDSSGTIQLYVTKEA 92

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F  AKS+    ++ I G +              G + +     ++L+ A   PLP   
Sbjct: 93  RPF--AKSLDLGDIVGITGALHLSGK---------GDLYVQMDNYQLLTKALR-PLPDKF 140

Query: 117 EREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                + +R++ R++DL  +  +      R+R+++ +R  + A +++E  TP+L      
Sbjct: 141 HGLADQEMRYRQRYVDLIVNPDVRNTFRIRSRVVDFIRRYLNAADYLEVETPMLQVIPGG 200

Query: 176 G-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+          Y +  AP+ Y + L+  GF+R ++I   FR+E   +   P EF
Sbjct: 201 AVARPFVTHHNALDIDMY-MRIAPELYLKRLVVGGFERVYEINRNFRNEGLSTRHNP-EF 258

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
             L+   ++ + +D+++  E++LR +  E      V N       D           D  
Sbjct: 259 TMLEFYQAYSDFNDLMDLTEDMLRKMTTEVLGSTKVVNT----TKDAEGEVVSEVHYDFA 314

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            P I  +V +  +     + ++ L+   G    A
Sbjct: 315 EPFIRLSVFDSILQYNPEISAEQLADEAGARKIA 348



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 10/165 (6%)

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
            +    A      IA +L I   + +    +     +E   E           TM    +
Sbjct: 336 EQLADEAGA--RKIATDLHIPLKDIWGLGKV-QIEIFEKTVEHLLEQPTF--ITMYPAEV 390

Query: 467 ESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG- 524
             L + ND       +++    G EIA+G    + SE     F      K+  ++     
Sbjct: 391 SPLARRNDQDPHVTDRFEFFVGGREIANGFSELNDSEDQESRFKQQVAEKDAGDDEAMHF 450

Query: 525 ---LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                RA + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 451 DADYIRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVLLFPHMR 495


>gi|78045531|ref|NP_001030257.1| aspartyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|110287976|sp|Q3SYZ4|SYDC_BOVIN RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|74267650|gb|AAI03320.1| Aspartyl-tRNA synthetase [Bos taurus]
          Length = 501

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 149/381 (39%), Gaps = 47/381 (12%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKS 64
             DL V   G  V +   VH  R  G   FL +R        +  V  +      + A +
Sbjct: 48  ISDLTVQKAGEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAAN 107

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE-- 122
           +  E ++ ++G+V  R       +     +EL  QKI ++S AE        +   PE  
Sbjct: 108 INKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISSAEPRLPLQLDDAVRPEVE 165

Query: 123 -----------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
                        R   R +DLR  T       ++ I +  R  +  + F+E  TP + +
Sbjct: 166 GEEEGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHPFRETLTNKGFVEIQTPKIIS 225

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R  
Sbjct: 226 AASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHL 283

Query: 232 GEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------ 274
            EF  LD+EM+F        ++I +T+  + +G+ + F       N       F      
Sbjct: 284 TEFVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPT 343

Query: 275 LRICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYE 325
           LR+ Y +A+           D+ DL  P    +  + +    ++F +  K  L+V P Y 
Sbjct: 344 LRLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFYT 403

Query: 326 VWAIPAKGGGGNRAFCDRMNE 346
           +          +     R  E
Sbjct: 404 MPDPRNPKQSNSYDMFMRGEE 424



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 345 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYD----TDFYILD------KY 394

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 395 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLVTERALHH 445

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 446 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501


>gi|241763859|ref|ZP_04761904.1| lysyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241366903|gb|EER61317.1| lysyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 514

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 35/306 (11%)

Query: 7   HSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHY-----GITQVV 51
           H    L                  V ++G +   R  G   F  ++D       G  Q+ 
Sbjct: 47  HHAATLQDQHASKDAESLEAHAVHVSVAGRMMLKRVMGKASFATVQDGSLGETGGRIQLY 106

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              D+   ++  + +   +  I G      AE       TG++ +    + +L+ +   P
Sbjct: 107 ITRDALGEDLYAAFKHWDLGDIIG------AEGTLMKTKTGELSVKVTTLRLLTKSLR-P 159

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILT 170
           +P        + ++++ R++DL  D   +   V R++ ++ +R  M+   F+E  TP+L 
Sbjct: 160 MPDKFHGVADQEVKYRQRYVDLMTDEAARKRFVARSKAVSGIRDFMVQHGFLEVETPMLH 219

Query: 171 A-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F+      +   Y L  AP+ Y + L+  GF+R F+I   FR+E   S R
Sbjct: 220 PIPGGANAKPFVTHHNALEQEMY-LRIAPELYLKRLLVGGFERVFEINRNFRNEGI-SVR 277

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYD 280
              EF  ++   ++    D++   E ++R    + +    ++           F R+   
Sbjct: 278 HNPEFTMMEFYAAYWNYQDLMGFTEQLVRDAALKAAGTLQLTYQGREVDLAQPFARLTIR 337

Query: 281 DAIRRY 286
           +AI +Y
Sbjct: 338 EAIFQY 343



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           ++E   E+K        F M      S   + ND       +++L   G E  +G    +
Sbjct: 384 YFEETVEDKLWQPT---FIMEHPTEISPLARANDARPEVTERFELYITGREFGNGFSELN 440

Query: 500 MSEVMLQAFSNVGISKEVVEN---RFGG-LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            +E     F     +K+  ++    F     RA + GMPP GG   GIDR++MLL  + +
Sbjct: 441 DAEDQAARFHAQVAAKDSGDDEAMYFDHDFVRALEYGMPPAGGCGIGIDRLMMLLTDSPS 500

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 501 IRDVILFP 508


>gi|163791072|ref|ZP_02185492.1| asparaginyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873628|gb|EDP67712.1| asparaginyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 432

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 75/324 (23%), Positives = 129/324 (39%), Gaps = 35/324 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEW 69
             + VG  V +  WV   R  G I FL +RD  G      V +  +   F++AKS+  E 
Sbjct: 9   SKNHVGEEVEIGAWVANKRSSGKIAFLQLRDGSGFFQGIVVKSEVEEEVFQLAKSLNQET 68

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G++   S             E++ + I+++  +++ P+     +E+       +R
Sbjct: 69  SISLTGIIQEDSRSKF-------GYEIAVKSIKVIGESQDYPITP---KEHGTEFLMDHR 118

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR    H  +  R  II +       E FI+   PILTAS+ E + +       +Q 
Sbjct: 119 HLWLRSSKQHAIMQIRNEIIRATYNFFNEEGFIKVDPPILTASAAEDSTELFHTQYFDQE 178

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +F  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F++ +  
Sbjct: 179 AF--LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMDHEQS 235

Query: 250 LNTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDA---IRRYGTDK 290
           L   E  +  + +   +                       + RI YDDA   +   G D 
Sbjct: 236 LEVQEKYVAYIIQSVLDNCDDALDVVGRDKELLKKYTELPYPRISYDDAVKLLNDNGFDD 295

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVF 314
               +     + T      +  VF
Sbjct: 296 ITWGDDFGSPHETFIATQYDKPVF 319



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 19/128 (14%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           D P +  N        A   F M         +   DL++ + +         E+  G  
Sbjct: 315 DKPVFILN-----YPKAIKAFYMKPHPDRDDVVLCADLIAPEGYG--------EVIGGSE 361

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R    + + Q     G++    E  +       + G  PH G   G++R V  + G +++
Sbjct: 362 REVDFDALSQRIKEFGLT----EEDYAWYMDLRKYGSVPHSGFGLGLERTVTWICGTEHI 417

Query: 557 REVSLFPM 564
           RE   FP 
Sbjct: 418 RESIPFPR 425


>gi|150006587|ref|YP_001301331.1| lysyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|166229794|sp|A6L7P5|SYK_BACV8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|149935011|gb|ABR41709.1| lysyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
          Length = 576

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 118/276 (42%), Gaps = 10/276 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +    +    V ++G +   R  G   F++++D  G  QV    D  C + 
Sbjct: 36  NAFSTDIKAEFKDDEEPRKVSVAGRMMSRRVMGKASFIELQDSKGRIQVYITRDDICPDE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + A+K+ +LS + +    V  +    
Sbjct: 96  NKEMYNTVFKRLLDLGDFIGIEGFVFRTQMGEISIHAKKLTVLSKSIKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R++DL  +   K   +KR+++ +SMR    ++ ++E  TPIL + + 
Sbjct: 156 YDKFEDPELRYRQRYVDLAVNEEIKDIFIKRSKVYSSMREYFNSKGYMEVETPILQSIAG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y +  A + Y + L+  GF+  ++I   FR+E       P E
Sbjct: 216 GAAARPFITHHNALDMPLY-MRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
           F  +++ +++ + + ++   E ++  +  + +    
Sbjct: 274 FTCMEIYVAYKDYNWMMEFTEKMIEKICLDVNGTTQ 309



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 17/150 (11%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+ NG E+ +     +     L+ F
Sbjct: 378 EGTYIQPTFITDYPKEMSPLTKIHRSNPDLTERFELMVNGKELCNAYSELNDPIDQLERF 437

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  E  ++          RA + GMPP  G+  G+DR+ ML+ G   ++EV  FP 
Sbjct: 438 EEQMKLSEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFPQ 497

Query: 565 SQNFCDLLMGSPSTVSVE----QLRELGLR 590
            +         P  ++ +    +  ELG+ 
Sbjct: 498 MR---------PEKITPKDTPAKFMELGIS 518


>gi|88704508|ref|ZP_01102222.1| asparaginyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88701559|gb|EAQ98664.1| asparaginyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 465

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 73/388 (18%), Positives = 122/388 (31%), Gaps = 48/388 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
              D G  V + GW+   R    GI FL I D      + A   +        +    + 
Sbjct: 13  RSPDEGGEVAVRGWLRSKRDSKAGISFLAIHDGSSFDAIQAVVPAELENYESEI----LA 68

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +      + +      +E+ A ++ +L   ++       ++ +          L
Sbjct: 69  LNTGCSVEVKGNLVPSQGKGQSVEIQASEVRVLGWVDDPETYPVAKKRHTFEYLRTQAHL 128

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
             R +T       R  + N++        F   +TPI+T S  EGA +    S ++  + 
Sbjct: 129 RPRTNTFGAITRVRHTLANAVHSYFHDNGFYWVNTPIITGSDCEGAGELFRVSTLDMSNI 188

Query: 192 YALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEF 234
              P     Y Q        L  SG            + +   P FR E+  + R   EF
Sbjct: 189 PRTPDGAVDYTQDFFGGDAFLTVSGQLAVESYCLSMSKVYTFGPTFRAENSNTSRHLAEF 248

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNN 273
           + ++ E++F +  D  +  E++L+ VF    N                        V  N
Sbjct: 249 WMIEPEVAFADLADNADLAESLLKYVFRRVLNECEDDLAFFNQRIDNTVIDRLTAMVDQN 308

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           F R+ Y DAI            P+         + SE   F     V     +   P + 
Sbjct: 309 FERMDYSDAITILKNSGKQFEFPVEWG----VDLASEHERFLCEEHVGRPVVLMNYPREI 364

Query: 334 GG-GNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 365 KAFYMRLNDDEKTVAAMDVLAPGIGEII 392



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 9/98 (9%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
             +D  ++ A   D++  G  EI  G  R    +V+             +          
Sbjct: 371 LNDDEKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARM------DSQLREELWWYRDL 422

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + G  PH G   G +R++  + G +N+R+   FP + 
Sbjct: 423 RRYGTVPHSGFGLGFERLINYVTGMENIRDAIPFPRTP 460


>gi|116328407|ref|YP_798127.1| lysine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116331136|ref|YP_800854.1| lysine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
 gi|122281115|sp|Q04SM4|SYK_LEPBJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|122283805|sp|Q050Q1|SYK_LEPBL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116121151|gb|ABJ79194.1| Lysine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116124825|gb|ABJ76096.1| Lysine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 495

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 72/367 (19%), Positives = 139/367 (37%), Gaps = 39/367 (10%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +L G +H  R  G   F  ++D  GI Q+ A  D          +S  +  I GL     
Sbjct: 55  KLGGRLHSKRVMGKASFAHLKDSTGIIQLYATRDDLGEISYSIFKSLDLGDIIGL----- 109

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFLDLRR 135
            E        G++ L    +E+L+        V  +             R++ R++DL  
Sbjct: 110 -EGYLFKTQKGEVTLHVTSVELLAKCIRPLPVVKEKDGVIYDAFADVEQRYRMRYVDLVV 168

Query: 136 D-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           +  +    + R+RI++ +R  +  E F+E  TP++   +    AR F+          + 
Sbjct: 169 NDHVRDTFITRSRIVSEIRNFLTNEGFLEVETPMMQPIAGGAAARPFVTHHNTLDMQLF- 227

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  G DR F++   FR+E   +   P EF  ++  ++F + + +L+  
Sbjct: 228 LRIAPELYLKRLIVGGMDRVFELNRNFRNEGISTKHNP-EFTMMEAYIAFADMNTMLDLT 286

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEHFVHSE 310
           E ++  + ++                     +YG D  DL  P   I   ++ + +   +
Sbjct: 287 ERLITHLAQKIHGALK--------------IQYGKDLIDLSPPWRKITYTDIIKEYSGID 332

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
           F + + +           +            D   E    + +P L    + +D    + 
Sbjct: 333 FSLITSLEEAKKKASELNVDVSKCNTIWKVAD---EVFSEKAEPNLIQPVFIIDYPKEL- 388

Query: 371 GMGPVAK 377
              P+AK
Sbjct: 389 --SPLAK 393



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 27/144 (18%)

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS-IKAFQYDLVC 486
             N  +  +I+D+P                        +  L  ++        +++   
Sbjct: 372 EPNLIQPVFIIDYP----------------------KELSPLAKSNPDKPGYVERFEPYV 409

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAG 542
            G EI +     +      + F +    +E  ++          RA + GMPP GG+  G
Sbjct: 410 AGREIGNAFTELNDPFDQKERFEDQVQQREAGDDEAFMMDEDYIRALEYGMPPTGGLGIG 469

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQ 566
           IDR+VMLL  + ++R+  LFP+ +
Sbjct: 470 IDRLVMLLTDSHSIRDTILFPLMR 493


>gi|37522925|ref|NP_926302.1| lysyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|39932049|sp|Q7NG18|SYK_GLOVI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|35213927|dbj|BAC91297.1| lysyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 497

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 69/324 (21%), Positives = 126/324 (38%), Gaps = 25/324 (7%)

Query: 2   HRY-RTHSCGDLGVS----DVGSFV----RLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           +RY RTH  GDL       + G  V     ++G +   R  G + F  ++D  G  Q+  
Sbjct: 27  YRYERTHMAGDLQAKYKDLENGQEVEDAVSVAGRIVARRVLGSVAFFGLQDDSGTIQLYF 86

Query: 53  NPDSACFEI-AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
           +       + A + +    L   G  +             G++ +   + E+L  +  LP
Sbjct: 87  DKKRIRESMGADAFKWLDKLTDTGDFIGAHGTIRRTE--RGELSVYVHEYELLCKS-ILP 143

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP           R++ R+LDL  +  + +   KR  I+  +R  +    F+E  TP+L 
Sbjct: 144 LPSEYYGLTDVQKRYRQRYLDLIANPGVRETFRKRALIVREIRRFLDERGFLEIETPVLQ 203

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
             +   A           G    L  A + + + L+  GF++ +++   FR+E   +   
Sbjct: 204 TEAGGAAARPFTTHHNALGLDMFLRIATELHLKRLVVGGFEKVYELGRIFRNEGISTRHN 263

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS---------NGNTVSNNFLRICY-D 280
           P EF  +++  ++ +  DI++ +E +LR V              N   +   F RI   D
Sbjct: 264 P-EFTTVEIYEAYSDYFDIMDLVETLLRAVAHIVLGSTELVCEGNTIDLGAPFRRITMFD 322

Query: 281 DAIRRYGTDKPDLRNPIIMHNVTE 304
              +  G     LR+      + E
Sbjct: 323 LVAQMTGVALAGLRDGEKAARLAE 346



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 480 FQYDLVCNGFEIASGGIRNHMS-------EVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            +++L  NG E A G    +         E   +A +   +     +  F     A + G
Sbjct: 402 ERFELYINGRETADGFSELNDPVDQRARLEAQAKAKAAGDLEAHPFDEDF---LTAIEHG 458

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +PP GG+  GIDR+VMLL  + ++R+V  FP
Sbjct: 459 LPPTGGVGIGIDRLVMLLTDSPSIRDVIAFP 489


>gi|225873796|ref|YP_002755255.1| asparagine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225794514|gb|ACO34604.1| asparagine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 452

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 62/307 (20%), Positives = 113/307 (36%), Gaps = 30/307 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVL 71
              G  + L GW++ +R  G ++F   RD  G  Q +    +     FE  K +  E  +
Sbjct: 24  EHEGKTITLRGWLYNLRESGKLLFPIFRDGSGTIQGIVPKAAVAPEVFERIKGLTQESSV 83

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G V +            G  EL  + +E++    E        +E+      ++R L
Sbjct: 84  IVTGKVRADHR-------APGGYELDVENVEVVQRVPEDTPFPISLKEHGTDFLMEHRHL 136

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R       +  R  II + R  +    FI    PILT ++ EG             ++
Sbjct: 137 WIRTPRQSAILRIRAEIIKAARDFLDDNGFILTDPPILTPAACEGTSTLFPVEYFGDEAY 196

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E ++   DD++ 
Sbjct: 197 --LTQSGQLYIEST-ALALGKVYSFGPTFRAEKSKTRRHLTEFWMVEPEWAYAGLDDLMG 253

Query: 252 TMENVLRGVF---------------EEFSNGNTVSNNFLRICYDDAIRRYGTDKPD--LR 294
             E  +  +                 + +   ++   F R+ YD+A +          L 
Sbjct: 254 LAEQFISFIVGRVLTRRAADLKVLGRDVAKLQSIQAPFPRLSYDEAAQMLNDAHAKGLLE 313

Query: 295 NPIIMHN 301
           +P    N
Sbjct: 314 HPFEYGN 320



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 38/115 (33%), Gaps = 10/115 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   A   F M      S     +  +    Y       EI  G  R    E++ Q   +
Sbjct: 342 RYPAAVKAFYMEPDPENSKYALCVDVLAPEGY------GEIIGGSQRISSYELLKQRIED 395

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             +        F       + G  PH G   GI+R V  + G ++VRE   F  +
Sbjct: 396 HQLPL----EAFQWYLDLRRYGSVPHSGFGMGIERAVAWICGLEHVRETIPFART 446


>gi|195978451|ref|YP_002123695.1| lysyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975156|gb|ACG62682.1| Lysyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 501

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 63/320 (19%), Positives = 120/320 (37%), Gaps = 32/320 (10%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT + G+L                    ++G +   R  G + F  ++D  G  Q+    
Sbjct: 41  RTTNSGELKEKYSDKTKEDLQELQATAIIAGRLMTKRGKGKVGFAHLQDRQGQIQIYVRK 100

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS   E     +   +    G  +    + +  ++  G++ + A K+  LS +   PLP 
Sbjct: 101 DSVGDENYDIFKKADL----GDFIGVEGDIMRTDM--GELSIKATKLTHLSKSLR-PLPE 153

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                      ++ R LDL  +       V R+++I+ +R  +    F+E  TP+L   +
Sbjct: 154 KFHGLTDIETIYRKRHLDLISNRSSFERFVTRSKMISEIRRYLDGLGFLEVETPVLHNEA 213

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+            L  A + + + L+  G +R ++I   FR+E   +   P 
Sbjct: 214 GGAAARPFITHHNAQDIDM-VLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP- 271

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283
           EF  +++  ++ +  D++N  E +++   +       V            F RI   DAI
Sbjct: 272 EFTSIEVYEAYADYLDMMNLTEGIIQHAAKAVRGEGPVDYQGTEIKINEPFKRIHMVDAI 331

Query: 284 RRYGTDKPDLRNPIIMHNVT 303
           +       D    +     T
Sbjct: 332 KE--VTGIDFWPEMTFEEAT 349



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K N   S    +++L     E A+     +     L  F     +KE+ ++   G     
Sbjct: 400 KKNPEDSRFTDRFELFIMTKEYANAFTELNDPIDQLSRFKAQAAAKELGDDEATGIDYDF 459

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+ MLL     +R+V LFP  +
Sbjct: 460 VEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLLFPTMK 500


>gi|166363182|ref|YP_001655455.1| asparaginyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189083274|sp|B0JN99|SYN_MICAN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166085555|dbj|BAG00263.1| asparaginyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 454

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 68/368 (18%), Positives = 122/368 (33%), Gaps = 39/368 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              V + GWV   R      FL++ D   +  +    +    +    +++       G  
Sbjct: 15  DQSVTVQGWVRTKRELKEFTFLEVNDGSSLANLQVILEPTLPDYENVLKTIS----TGAA 70

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           ++ S   + +      IEL A +I +         P+  +R   E +R     L  R +T
Sbjct: 71  IAVSGNLVPSPGKGQNIELKAAEITLYGDC-PPDYPLQKKRHSFEFLR-TIAHLRARTNT 128

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-------GS 190
           L   +  R     ++      + FI   TPI+TA+  EGA +    + ++          
Sbjct: 129 LGAVMRVRNACATAIHSFFQEKGFIWVHTPIITANDCEGAGELFTVTSLDLKKPANFAED 188

Query: 191 FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           F+   A      Q +  +MA      +   P FR E+  + R   EF+ ++ EM+F + +
Sbjct: 189 FFGKRAYLTVSGQLQAEVMAMALSNVYTFGPTFRAENSNTSRHLAEFWMVEPEMAFCDLE 248

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RICYDDAIRRY 286
              +  E  L+ +F+           F                      RI Y +AI   
Sbjct: 249 GDQDLAEAFLKYIFKFVLENCPEDLQFFNERIDKTVLSTAENIVNSEFGRITYSEAIELL 308

Query: 287 GTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                    P+       +EH  +    +F K + V    +           N      M
Sbjct: 309 EKADRQFEFPVEWGVDLQSEHERYLAEELFKKPVIVTNYPKTIKAFYMRLDDNNKTVSAM 368

Query: 345 NEWARSQG 352
           +  A   G
Sbjct: 369 DILAPKIG 376



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    +V++Q     G++ + +           + G  PH G   G +R+V  
Sbjct: 377 EIIGGSQREERLDVLIQRMQEQGMNPDDLW----WYLDLRRYGSVPHAGFGLGFERLVQF 432

Query: 550 LLGAKNVREVSLFPMSQNFCD 570
           + G  N+R+V  FP +    D
Sbjct: 433 MTGMTNIRDVIPFPRTPLSAD 453


>gi|237745577|ref|ZP_04576057.1| lysyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229376928|gb|EEO27019.1| lysyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 511

 Score =  192 bits (488), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 66/312 (21%), Positives = 118/312 (37%), Gaps = 35/312 (11%)

Query: 7   HSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYG-----ITQVV 51
           H    L     G            V ++G +   R  G   F  + D  G       Q+ 
Sbjct: 46  HKAASLHEQYDGQDNDTLEPAAIQVCVAGRMMLKRVMGKASFATLMDASGPRADGRIQLF 105

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
            + D+   E     +   +  I G      A+       TG++ +    + +++ +   P
Sbjct: 106 ISNDTIGKEAHDIFKRYDIGDILG------AKGTLFKTKTGELTIRVTALRLITKSVR-P 158

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT 170
           LP        + IR++ R++DL  +   +   + RT  I S+R  M    F+E  TP+L 
Sbjct: 159 LPDKFHGLSDQEIRYRQRYVDLIMNEETRRTFRARTAAIASIRRFMGENGFMEVETPMLH 218

Query: 171 A-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
           A      A+ F+          + +  AP+ Y + L+  GFDR F++   FR+E   S R
Sbjct: 219 AIPGGAAAKPFITYHNALDMQMF-MRIAPELYLKRLLVGGFDRVFELNRNFRNEGV-SPR 276

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYD 280
              EF  ++   ++V+   +++  E V+R    +                S  F R+   
Sbjct: 277 HNPEFTMMEFYAAYVDYRWLMDFTETVIRQAVIDTYGTPVITYQGRELDFSKPFHRLTIL 336

Query: 281 DAIRRYGTDKPD 292
           +AI +Y      
Sbjct: 337 EAIAKYAPHYTK 348



 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 5/130 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E K  +  +     P       + +D       +++L   G EIA+G    +  
Sbjct: 381 LFEETAEAKLWEPTY-IIDYPVEVSPLARASDTRPDITERFELFMVGREIANGFSELNDP 439

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F     +K+  +           RA + GMPP GG   GIDR+VMLL  + N+R
Sbjct: 440 EDQSARFMKQVEAKDAGDEEAMYYDSDYIRALEYGMPPAGGCGIGIDRLVMLLTDSPNIR 499

Query: 558 EVSLFPMSQN 567
           +V LFP  + 
Sbjct: 500 DVILFPHMRR 509


>gi|291556890|emb|CBL34007.1| Lysyl-tRNA synthetase (class II) [Eubacterium siraeum V10Sc8a]
          Length = 503

 Score =  192 bits (488), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 67/295 (22%), Positives = 119/295 (40%), Gaps = 23/295 (7%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH    +           V ++G +   R  G   F+DIRD  G  QV    D    +  
Sbjct: 50  THKAQQIRDNFEELEEKDVMIAGRITSWRDMGKANFIDIRDDSGRMQVYVRIDDIGEDNF 109

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  +   +  I G+               G+I + A+ I+ L     LPLP        +
Sbjct: 110 KEFKKWDLGDIVGV------SGFVFKTRRGEISVHAKSIK-LLSKSLLPLPEKWHGLKDK 162

Query: 123 SIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL     +    VKR+ I+  +R  + +  ++E  TP+L        AR F
Sbjct: 163 EERYRKRYLDLIANPEIKDTFVKRSMILREIRSFLDSRGYLEVDTPVLHTLEIGAAARPF 222

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L    + Y + L+  GFDR +++   FR+E   +   P EF  ++M 
Sbjct: 223 VTHHNALDIDMY-LRIETELYLKRLIVGGFDRVYEVGRIFRNEGMDATHNP-EFTSIEMY 280

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            ++ +   +++ +E + R V  +    +TV            + R+   +A++ Y
Sbjct: 281 QAYTDYYGMMDLIEEMYRTVALKVCGTDTVPYQGKEIEIGKPWKRMTMKEAVKEY 335



 Score = 84.0 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 4/128 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E+K I      +  P       K          +++   N  E  +     +  
Sbjct: 373 LFEEFVEDKLIQPTI-IYDYPVENSPLAKRKPTDPAFTERFEYFINACEFGNAFSELNDP 431

Query: 502 EVMLQAFSNVGISKEVVENRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
               + F+   + K               A + G+PP GG+  G+DR VMLL  + ++R+
Sbjct: 432 IDQRERFTKQVMEKRKQGANAQIDEDFLTALEYGLPPTGGLGMGLDRFVMLLTDSASIRD 491

Query: 559 VSLFPMSQ 566
           V LFP  +
Sbjct: 492 VLLFPTMK 499


>gi|327260634|ref|XP_003215139.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 503

 Score =  192 bits (488), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 91/379 (24%), Positives = 150/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL        V + G VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 52  DLTGEKADEVVWVRGRVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 111

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ I+G+V     +          +EL  Q+I ++S+AE        +   PE    
Sbjct: 112 KESIVDIEGVVRKVPHKIGGCT--QQDVELHVQRIYVISLAEPRLPLQLDDAIRPEVDGE 169

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R +DLR  T       ++ I    R  +I + F+E  TP + +++
Sbjct: 170 EEGRATVNQDTRLDNRVIDLRTCTSQAVFRLQSGICQLFRETLIQKGFVEIQTPKIISAA 229

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + FD+ F I P FR ED  + R   E
Sbjct: 230 SEGGANVFTVSYFKSNAYLA--QSPQLYKQMCICADFDKVFCIGPVFRAEDSNTHRHLTE 287

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNFL-----------R 276
           F  LD+EM+F        D+I +TM  + +G+ E F +   TVS  F            R
Sbjct: 288 FVGLDIEMAFNYHYHEVVDEIADTMVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 347

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + + +A+           D+ DL  P    +  + +    ++F +  K  L+V P Y + 
Sbjct: 348 LEFPEALAMLREAGVEMGDEDDLSTPSEKLLGRLVKEKYDTDFYILDKYPLAVRPFYTMP 407

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 408 DPKNPKTSNSYDMFMRGEE 426



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                   +  YD+   G EI SG  R H  +++ +   +
Sbjct: 395 KYPLAVRPFYTMPD--------PKNPKTSNSYDMFMRGEEILSGAQRVHDPQLLTERAMH 446

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP       
Sbjct: 447 HGIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLYLGLSNVRQTSMFPRDPKRLT 502

Query: 571 L 571
            
Sbjct: 503 P 503


>gi|229112023|ref|ZP_04241566.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229152756|ref|ZP_04280939.1| Asparaginyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228630576|gb|EEK87222.1| Asparaginyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228671346|gb|EEL26647.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock1-15]
          Length = 463

 Score =  192 bits (488), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 130/372 (34%), Gaps = 61/372 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCID 74
            G  V++SGW+  +R      F+++ D      V    + +   F+    +     + ++
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V++               E+ A+KI+I  +++    P+  +R   E +R     L  R
Sbjct: 77  GKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+   TPI+T S  EGA +    +  +       
Sbjct: 128 TNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNLPKG 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGKVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E  D++N  E++L+   +           F                      R
Sbjct: 248 EPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           I Y +AI+       D + P+   +   TEH  +    +F + + V    +         
Sbjct: 308 ITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI------- 360

Query: 335 GGNRAFCDRMNE 346
              +AF  R+NE
Sbjct: 361 ---KAFYMRLNE 369



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M           D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMR-------LNEDGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|254304063|ref|ZP_04971421.1| lysine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148324255|gb|EDK89505.1| lysine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 493

 Score =  192 bits (488), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 61/314 (19%), Positives = 125/314 (39%), Gaps = 16/314 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + +G +  +R  G + F  I D  G  Q+    D    E    +     +   G ++   
Sbjct: 57  KTAGRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNV---GDIIGIE 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E    +  T ++ L  + I +L+      LP          IR++ R++DL  +   ++
Sbjct: 114 GELFITH--TEELTLRVKSIALLTK-NVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRD 170

Query: 142 -IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQ 199
             +KRT+II ++R  +    F+E  TP++        A+ F+          Y L  AP+
Sbjct: 171 TFIKRTQIIKAVRKYLDDRGFLEVETPLMHPILGGAAAKPFVTHHNALNLDLY-LRIAPE 229

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R +++   FR+E   +   P EF  +++  S    +D+++  E ++  
Sbjct: 230 LYLKKLIVGGFERVYELGRNFRNEGISTRHNP-EFTMIELYQSHANFNDMMDLCEGIISS 288

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP------DLRNPIIMHNVTEHFVHSEFRV 313
           V +E +    +  + +++   +  R +  D        D    +      +        V
Sbjct: 289 VCQEVNGTTDIEYDGVKLSLKNFARVHMVDMIKEVTGVDFWKEMTFEEAKKIAKEHHVEV 348

Query: 314 FSKILSVNPGYEVW 327
              + SV      +
Sbjct: 349 ADHMDSVGHIINEF 362



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 6/130 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE+ +          +    + +  D  +    +++L  N  E A+     +  
Sbjct: 362 FFEQKCEERVVQPTFVYGHPVEISPLAKRNEDNPNF-TDRFELFINKREYANAFTELNDP 420

Query: 502 EVM-----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                    Q    +  ++E           A + G+PP GG+  GIDR+VMLL GA ++
Sbjct: 421 ADQRGRFEAQVEEAMRGNEEATPEIDESFVEALEYGLPPTGGMGIGIDRLVMLLTGAPSI 480

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 481 RDVILFPQMK 490


>gi|329913867|ref|ZP_08276000.1| Lysyl-tRNA synthetase (class II) [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327545273|gb|EGF30527.1| Lysyl-tRNA synthetase (class II) [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 510

 Score =  192 bits (488), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/287 (20%), Positives = 117/287 (40%), Gaps = 25/287 (8%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGI-----TQVVANPDSACFEIAKSVRSEWVLCID 74
            V ++G +   R  G   F  ++D  G+      Q+    D+   +   + +   +  I 
Sbjct: 68  KVVVAGRMMLKRVMGKASFATLQDASGVRADGRIQLYITNDNVGADAHDAFKHYDLGDIL 127

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G      AE +     TG++ +    + +++ +   PLP        + ++++ R++DL 
Sbjct: 128 G------AEGLLFKTKTGELSIKVTALRLITKSLR-PLPDKFHGLADQEMKYRQRYVDLI 180

Query: 135 R-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFY 192
             +   +    RT  ++S+R  M    F+E  TP+L T      A+ F+          +
Sbjct: 181 MSEETRRTFKARTATMSSIRRFMNEHEFMEVETPMLHTIPGGAAAKPFITHHNALDMQMF 240

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++V+   +++ 
Sbjct: 241 -LRIAPELYLKRLVVGGFERVFEVNRNFRNEGV-SPRHNPEFTMMEFYAAYVDYHWLMDF 298

Query: 253 MENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDK 290
            E V+R    +     T++           F R     AI  Y    
Sbjct: 299 TEAVIRQAAIDAHGTATLTYQGRELDLSQPFRRFTILGAINHYAPQY 345



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 54/336 (16%), Positives = 111/336 (33%), Gaps = 48/336 (14%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA--IRRYGTDKPDLRNPIIMH 300
           F+ + + +     +L  +          +     I + +A  ++ +    P+L    ++ 
Sbjct: 202 FMNEHEFMEVETPMLHTI-------PGGAAAKPFITHHNALDMQMFLRIAPELYLKRLVV 254

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ---PGLA 357
              E          ++ +S     E   +       +  +     E    Q      G A
Sbjct: 255 GGFERVFEVNRNFRNEGVSPRHNPEFTMMEFYAAYVDYHWLMDFTEAVIRQAAIDAHGTA 314

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF------CS 411
            + ++  E   +    P  +   +        +   +      FI  +  KF       +
Sbjct: 315 TLTYQGRE---LDLSQPFRRFTILGAINHYAPQYSAEQLADADFIKTELKKFGVKPFATA 371

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
                +  + +E        +E  +I+D+P                            + 
Sbjct: 372 GLGALQLALFEE--TAEAQLWEPTYIVDYP---------------------AEVSPLARA 408

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYR 527
           +D +     +++L   G E+A+G    + +E     F     +K+  +           R
Sbjct: 409 SDTVPGITERFELFICGRELANGFSELNDAEDQAARFQAQVAAKDAGDEEAMFYDADYIR 468

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG   GIDR+VML+  + N+R+V LFP
Sbjct: 469 ALEYGMPPAGGCGIGIDRLVMLITDSPNIRDVILFP 504


>gi|78187216|ref|YP_375259.1| lysyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|123771051|sp|Q3B365|SYK_PELLD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78167118|gb|ABB24216.1| Lysyl-tRNA synthetase, class-2 [Chlorobium luteolum DSM 273]
          Length = 501

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/312 (20%), Positives = 124/312 (39%), Gaps = 29/312 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             D    V ++G +  +R  G   F  I+D  G  Q+    D    E+     + + L  
Sbjct: 50  KEDAEEKVSVAGRIMAIRRMGKASFFHIQDSDGRMQIYLKKD----EVGDDAYATFKLLD 105

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE----------S 123
            G ++  +  T      TG+I + A+  E+L  +         +    E           
Sbjct: 106 IGDIVGVNGYTFRTR--TGEISVHAESFELLCKSLRPIPVAKEKEVEGEKVVFDAFADRE 163

Query: 124 IRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFL 181
           +R++ R++DL  +   +   +KR+ I++ +R    ++ ++E  TPIL        AR F 
Sbjct: 164 LRYRQRYVDLIVNPEVRSTFIKRSAIVSHIRSFFTSQGWLEVETPILQPIYGGAAARPFT 223

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  A + Y + L+  GFD  F+ A  FR+E       P EF Q+++ +
Sbjct: 224 THHNALDMQLY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEGIDRFHNP-EFTQVELYV 281

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPD 292
           ++ + D ++  +E + +      +                 F R+   D+IR Y   + +
Sbjct: 282 AYKDYDWMMRLVEELFQQTAIAVNGTAMTTFLGHEISLEAPFRRLTIADSIREYTGAEIE 341

Query: 293 LRNPIIMHNVTE 304
            +    + N+ +
Sbjct: 342 GKTETELRNLAK 353



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 7/153 (4%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           + RN +A++LG+          I+D  F E+ E   K+         P       K +  
Sbjct: 347 ELRN-LAKDLGLELDPKIGSGKIIDEIFGEFVE--PKLIQPTFITDYPTEMSPLAKPHRS 403

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++L+  G EI +     +   +  Q        ++  ++          RA +
Sbjct: 404 KPGLVERFELIAGGKEICNSFSELNDPVIQRQRLEEQASLRQRGDDEAMVVDEDFLRALE 463

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP  G+  GIDR+VML+ G +++R+V  FP
Sbjct: 464 YGMPPTAGLGIGIDRLVMLITGEESIRDVIFFP 496


>gi|253583599|ref|ZP_04860797.1| lysine-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251834171|gb|EES62734.1| lysine-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 493

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/329 (20%), Positives = 132/329 (40%), Gaps = 21/329 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + +G +   R  G  +F  I D  G  Q+    D    E+ + V    V  I G+     
Sbjct: 57  KTAGRIMAYRGKGKTLFAHIEDRTGRIQLYLRKDELGDEVFEMVNKIGVGDIVGV----- 111

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHK 140
            E       TG++ L    I++LS     PLP           R++ R++DL  +  +  
Sbjct: 112 -EGELFVTHTGELTLRVTSIQLLSK-NIRPLPEKFHGLTDVETRYRKRYVDLIMNKDVRD 169

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQ 199
             +KRT+II  +R  +  + F+E  TP++        A+ F+          Y +  AP+
Sbjct: 170 TFIKRTQIIKGIREILDNKGFLEVETPLMHPILGGAAAKPFITHHNALNVDLY-MRIAPE 228

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G ++ +++   FR+E   +   P EF  +++  ++ + +D+++  E ++  
Sbjct: 229 LYLKRLIVGGLEKVYELGRNFRNEGMSTRHNP-EFTMIELYQAYADFNDMMDLAEEIITT 287

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF--SKI 317
           + ++     TV  N   +  ++  R +  D         +  VT      +   F  +K 
Sbjct: 288 LAKKVLGTTTVEYNGKTLVLENFKRIHMVDF--------VKEVTGVDFWDQNMTFEEAKA 339

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           L+     EV       G     F +   E
Sbjct: 340 LAKQHHVEVADHMNSVGHVVNQFFEEKCE 368



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 12/133 (9%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   EEK +       +P  +    +      D       +++L  +  E A+     
Sbjct: 362 FFEEKCEEKIVQPTFVYGHPVEISP--LAKRNEEDPR--FTDRFELFIDAREYANAFSEL 417

Query: 499 HMSEVM-----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
                       Q       + E           A + G+PP GG+  GIDR++MLL  +
Sbjct: 418 QDPADQRGRFEDQVEEAERGNDEATPVIDDDFVEALEYGLPPTGGMGIGIDRLIMLLTQS 477

Query: 554 KNVREVSLFPMSQ 566
            ++R+V LFP  +
Sbjct: 478 DSIRDVLLFPQMK 490


>gi|24640849|ref|NP_572573.1| Lysyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|19528341|gb|AAL90285.1| LD23509p [Drosophila melanogaster]
 gi|22832013|gb|AAN09255.1| Lysyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|220944834|gb|ACL84960.1| Aats-lys-PA [synthetic construct]
 gi|220954614|gb|ACL89850.1| Aats-lys-PA [synthetic construct]
          Length = 574

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 91/577 (15%), Positives = 172/577 (29%), Gaps = 109/577 (18%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G +     + ++G VH +R  G  +IF D+R      QV+A+  S   E       +   
Sbjct: 101 GETLENVKLSVAGRVHAIRESGAKLIFYDLRGEGVKVQVMASAKSYKSEA--DFEIDTSK 158

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++             G++ +   +I++LS      LP        +  R++ R+L
Sbjct: 159 LRRGDIIGVVG--HPGKTKKGELSVMPSEIKLLSPCL-HMLPHLHFGLKDKETRYRQRYL 215

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL   + + +    R +II+ +R  +    F+E  TP++   +        V    +   
Sbjct: 216 DLILNNNVREKFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNDLKM 275

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              +  AP+ Y ++L+  G DR ++I                                  
Sbjct: 276 DLFMRIAPELYHKMLVVGGLDRVYEIG--------------------------------- 302

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
                       +F N      +       +    Y              +  +    +E
Sbjct: 303 -----------RQFRNEGIDLTHNPEFTTCEFYMAYA-------------DYADIMDITE 338

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
             V   + ++   Y+V   P +G  G     D    + R      L            + 
Sbjct: 339 QLVSGMVKAIRGSYKVIYHP-EGPEGPEQELDFTPPFKRVSMIKTL---------EEKLQ 388

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
              P A   N   T     +L  +           P               +E  +    
Sbjct: 389 VKFPAADTFNSPETNQFLSQLCAKH----QVECPAPRTTARLLDKLVGEFIEEFCV---- 440

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
                +I                   +P  M             +     +++L     E
Sbjct: 441 --NPTFI-----------------CEHPQIMSPLAKYHRS----IPGLTERFELFVAKKE 477

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRI 546
           I +     +   V  + F      K   ++           + + G+PP GG   GIDR+
Sbjct: 478 ICNAYTELNDPVVQRERFEQQASDKAAGDDEAQLVDENFCTSLEYGLPPTGGFGMGIDRL 537

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
            M L  + N++EV LFP  +        + +  + +Q
Sbjct: 538 AMFLTDSNNIKEVLLFPAMKPEDANRTAAETAPTAQQ 574


>gi|86159150|ref|YP_465935.1| asparaginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775661|gb|ABC82498.1| asparaginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 434

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/305 (22%), Positives = 111/305 (36%), Gaps = 30/305 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWV 70
               G  V L GW+H  R  G + FL +RD  G  Q V    N     F+ +  +  E  
Sbjct: 11  AQHEGKEVTLHGWLHNRRSSGKLHFLQLRDGTGTIQCVVFKGNVTPEVFQASDHLPQETS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + GLV       I         EL  + + +  VA        G +E+  +   + R 
Sbjct: 71  LAVTGLVKKDERSPI-------GFELDVRDVRV--VARPALEFPIGHKEHGVAFLMEQRH 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R  +  ++R       F     PI T ++ EG          + G 
Sbjct: 122 LWLRSQRQQVILRVRHTVEKAIRDFFDQRGFTLVDAPIFTPAACEGTSTLFEVPYFDLGK 181

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E++F++ D  +
Sbjct: 182 AY-LTQSGQLYMEAA-AMALGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVAFMDLDGDM 239

Query: 251 NTMENVLRGVFE----------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
             ME  +  V +                + S    V   F RI Y +A+         ++
Sbjct: 240 ELMEQFVSYVVQTALEKHRAELATVLERDVSKLENVKAPFPRITYTEAVEVIQKAGHPMK 299

Query: 295 NPIIM 299
               +
Sbjct: 300 WGDDI 304



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 59/206 (28%), Gaps = 36/206 (17%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
           DGD             +     R  +A  L   + +  E      FP   + E  + I  
Sbjct: 236 DGDMELMEQFVSYVVQTALEKHRAELATVLE-RDVSKLENVK-APFPRITYTEAVEVIQK 293

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYD---LVCN---------------------GFE 490
           A +P  M  G      G D  ++ A Q+D   +V                       G +
Sbjct: 294 AGHP--MKWGDDI---GGDEETVVAKQFDRPVMVHRYPAEMKAFYFKKDPADPKVALGCD 348

Query: 491 IASGGIRNH-----MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
           + +             E  L          ++ +  F       + G  PH G   G++R
Sbjct: 349 VLAPEGYGEIIGGGQREDDLATLEAAIEHHQLPKQAFEWYLDLRRYGTVPHAGFGMGVER 408

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDL 571
            V  + G  +VRE   F         
Sbjct: 409 CVAWICGLHHVRETIPFARMMERITP 434


>gi|260909949|ref|ZP_05916636.1| asparagine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635899|gb|EEX53902.1| asparagine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 467

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 62/295 (21%), Positives = 116/295 (39%), Gaps = 29/295 (9%)

Query: 1   MHRYR-THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M + R T     L  +D GS V + GWV   R    + F+ + D   I  V    D   F
Sbjct: 1   MEKIRRTKIVDVLQRTDFGSEVNVKGWVRTHRSSKVVDFIALNDGSTINNVQVVVDPTKF 60

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+ K + +   +   G ++    +  N+       E+   ++E+L        P+  +
Sbjct: 61  DTELLKQITTGACVNATGKLVESQGQGQNS-------EIQCTELELLGGCGSDY-PMQKK 112

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +  E +R ++  L LR +T    +  R  +  ++        F    TPI+TAS  EGA
Sbjct: 113 GQTFEYMR-QHAHLRLRTNTFGAVMRIRHNMAIAIHQYFHDHGFYYFHTPIITASDAEGA 171

Query: 178 RDFLVPSRVNQ--------------GSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
            +    +  N                 F+    +     Q +  L A+   + +   P F
Sbjct: 172 GEMFQVTTKNLNDLKKDESGKVNYNDDFFGKMTSLTVSGQLEGELGATALGQIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F++ DD+++  E+ ++       +       FL
Sbjct: 232 RAENSNTPRHLAEFWMIEPEVAFIDLDDLMDLEEDFIKYCVRWALDNCKDDLAFL 286



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 14/121 (11%)

Query: 451 KIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                   F M       +++G D+         L     EI  G +R    + ++    
Sbjct: 359 HYPKGIKAFYMKLDEDGRTVQGTDV---------LFPQIGEIIGGSVREENYDKLVAQIE 409

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
              I  + +           + G  PHGG   G +R+++ + G +N+R+V  FP +    
Sbjct: 410 ERHIPMKDMW----WYLDTRRFGTCPHGGFGLGFERLILFVTGMQNIRDVIPFPRTPKSA 465

Query: 570 D 570
           +
Sbjct: 466 E 466


>gi|313158752|gb|EFR58139.1| lysine--tRNA ligase [Alistipes sp. HGB5]
          Length = 573

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/272 (22%), Positives = 115/272 (42%), Gaps = 10/272 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR++G +   R  G   F +++DH G  QV    D  C E   ++ +     +  +    
Sbjct: 55  VRIAGRIMTRRIMGSASFFELQDHTGRIQVYIRRDDICPEGDPTLYNTVFKKLLDIGDFI 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------YPESIRFKYRFLDL- 133
             E    +  TG++ +  +K  +LS +      V  +            +R++ R++DL 
Sbjct: 115 GVEGFAFHTNTGELSVHCRKFTVLSKSIRPLPVVKEKDGQTFDAFTDPEVRYRQRYVDLA 174

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
               + +  VKR +II++MR    ++ ++E  TPIL        AR F+          Y
Sbjct: 175 VNPQVREVFVKRAKIISTMREFFNSKGYVEVETPILQPIPGGAAARPFITHHNALDIDQY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GFD  ++    FR+E       P EF  +++ +++ +   ++  
Sbjct: 235 -LRIASELYLKKLIVGGFDGVYEFGKNFRNEGMDRTHNP-EFTVMEIYVAYKDYLWMMEF 292

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            E +L  V    +    V+ +  +I +    R
Sbjct: 293 TEQMLEKVAVAVNGTTEVTLDGKQISFKAPFR 324



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 4/93 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGM 533
              +++L  NG E+ +     +     L+ F       E  ++          RA + GM
Sbjct: 407 LTERFELFVNGKELCNAYSELNDPIDQLERFQEQLQLSEKGDDEAMFIDMDFVRALEYGM 466

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P   G+  GIDR+ M +    ++++V  FP  +
Sbjct: 467 PSCSGMGIGIDRLTMFMTDQASIQDVLFFPQMR 499


>gi|83645055|ref|YP_433490.1| asparaginyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|123767469|sp|Q2SJV9|SYN_HAHCH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|83633098|gb|ABC29065.1| asparaginyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 465

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 70/402 (17%), Positives = 135/402 (33%), Gaps = 59/402 (14%)

Query: 6   THS-CGDL--GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACF 59
           TH    DL    +++GS V + GWV   R    G+ F+ + D       Q V   +   +
Sbjct: 2   THYAISDLLKNKAEIGSEVTVKGWVRSRRDSKAGVSFIHVHDGSCFDAIQAVVAKELPNY 61

Query: 60  EI-AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +     + +   L + G ++    +  +        E+ A  +E++ + ++       ++
Sbjct: 62  DADVLRLTTGCSLIVTGTLVESPGQGQSC-------EIQATSVELVGLVDDPETYPVAKK 114

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
            +          L  R +        RT + +++      + F   +TPILTAS  EGA 
Sbjct: 115 RHTFEFLRGVAHLRPRTNAFGAVTRVRTTLSHAVHHFFYEQGFQWINTPILTASDCEGAG 174

Query: 179 DFLVPSRVNQ--------------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFR 221
           +    S ++                 F+          Q           + +   P FR
Sbjct: 175 ELFRVSTLDMANLPKTDSGKIDYSKDFFGKETFLTVSGQLNVEAYCLAMSKVYTFGPTFR 234

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN--------------- 266
            E+  + R   EF+ ++ E++F + +D  +  E  L+ +F+   +               
Sbjct: 235 AENSNTSRHLAEFWMIEPEIAFADLNDDADLAERFLKHMFKVVLDERSDDMAFFAERINP 294

Query: 267 ------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKIL 318
                  N V   F+RI Y +AI+           P+   +   +EH  +      ++  
Sbjct: 295 DVVSRLENMVDKEFVRIDYSEAIKILQNCGKKFEYPVQWGLDLQSEHERY-----LAETH 349

Query: 319 SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
              P   +           R   D     A     PG+  I 
Sbjct: 350 VGAPVIVMNYPKEIKAFYMRLNDDDKTVAAMDVLAPGIGEII 391



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 8/99 (8%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
             +D  ++ A   D++  G  EI  G  R    +V+     ++       +         
Sbjct: 370 LNDDDKTVAAM--DVLAPGIGEIIGGSQREDRLDVLDARIGDMHH-----KEELWWYRDL 422

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP + +
Sbjct: 423 RRYGSVPHAGFGLGFERLIAYVTGMENVRDVIPFPRTPD 461


>gi|30264628|ref|NP_847005.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530098|ref|YP_021447.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49187449|ref|YP_030701.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|52140949|ref|YP_085881.1| asparaginyl-tRNA synthetase [Bacillus cereus E33L]
 gi|65321925|ref|ZP_00394884.1| COG0017: Aspartyl/asparaginyl-tRNA synthetases [Bacillus anthracis
           str. A2012]
 gi|165871453|ref|ZP_02216100.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167635590|ref|ZP_02393902.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167641599|ref|ZP_02399846.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170688249|ref|ZP_02879459.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170708691|ref|ZP_02899129.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177653163|ref|ZP_02935450.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190566877|ref|ZP_03019793.1| asparaginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196042100|ref|ZP_03109384.1| asparagine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196044950|ref|ZP_03112184.1| asparaginyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218905785|ref|YP_002453619.1| asparaginyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225866533|ref|YP_002751911.1| asparaginyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227817342|ref|YP_002817351.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228917197|ref|ZP_04080754.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228929605|ref|ZP_04092623.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935868|ref|ZP_04098678.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948283|ref|ZP_04110566.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229093653|ref|ZP_04224753.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229124124|ref|ZP_04253316.1| Asparaginyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229603957|ref|YP_002868837.1| asparagine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254686949|ref|ZP_05150807.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254724513|ref|ZP_05186296.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254736666|ref|ZP_05194372.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741704|ref|ZP_05199391.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254754699|ref|ZP_05206734.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757531|ref|ZP_05209558.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|38258300|sp|Q81L32|SYN_BACAN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|59798502|sp|Q633N6|SYN_BACCZ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|30259286|gb|AAP28491.1| asparagine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505246|gb|AAT33922.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49181376|gb|AAT56752.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|51974418|gb|AAU15968.1| asparagine--tRNA ligase (asparaginyl-tRNA synthetase) [Bacillus
           cereus E33L]
 gi|164712750|gb|EDR18280.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510484|gb|EDR85883.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167529010|gb|EDR91765.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170126371|gb|EDS95260.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170667755|gb|EDT18508.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172081687|gb|EDT66758.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190561868|gb|EDV15837.1| asparaginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196024438|gb|EDX63111.1| asparaginyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196027036|gb|EDX65659.1| asparagine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|218535284|gb|ACK87682.1| asparaginyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225786582|gb|ACO26799.1| asparagine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227004623|gb|ACP14366.1| asparagine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228659426|gb|EEL15074.1| Asparaginyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228689740|gb|EEL43547.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228811270|gb|EEM57608.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228823636|gb|EEM69458.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829992|gb|EEM75611.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842398|gb|EEM87489.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229268365|gb|ACQ50002.1| asparagine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 463

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/353 (18%), Positives = 123/353 (34%), Gaps = 51/353 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCID 74
            G  V++SGW+  +R      F+++ D      V    + +   F+    +     + ++
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V++               E+ A+KI+I  +++    P+  +R   E +R     L  R
Sbjct: 77  GKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+   TPI+T S  EGA +    +  +       
Sbjct: 128 TNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVPKG 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E  D++N  E++L+   +           F                      R
Sbjct: 248 EPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           I Y +AI+       D + P+   +   TEH  +    +F + + V    +  
Sbjct: 308 ITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI 360



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 70/204 (34%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M          +D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMR-------LNDDGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|291515937|emb|CBK65147.1| asparaginyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 462

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 63/312 (20%), Positives = 113/312 (36%), Gaps = 29/312 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEW 69
           L    V + V + GWV   R +  + F+ + D   +   QVV +      E  K V +  
Sbjct: 10  LKSDAVDTDVVVKGWVRTKRGNKNVAFIALNDGSCVGNIQVVVDLAKISEEQLKPVTTGA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L +DG +++              +E+ A+KIE+   A+    P+  +    E +R +  
Sbjct: 70  CLRVDGRLVASPGAG-------QGVEVQAEKIEVYGTADPESYPLQKKGHSLEFLR-EIA 121

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           +L  R +T    +  R  +  ++        F    TPI+TAS  EGA      + ++  
Sbjct: 122 YLRPRTNTFGAVLRIRHAMAYAIHEYFNKHGFYYFHTPIITASDCEGAGAMFQVTTLDMN 181

Query: 190 --------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                          F+          Q +  L A    R +   P FR E+  + R   
Sbjct: 182 NLPRTGEGAVDYAQDFFGKACNLTVSGQLEGELGALSLGRIYTFGPTFRAENSNTPRHAS 241

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF+ ++ E +F E +D +   E+ L+ +     +       F  +               
Sbjct: 242 EFWMIEPEAAFFELEDNMELAEDFLKYLIRYALDNCMEDLEF--MNKMWDKGLLERLHFV 299

Query: 293 LRNPIIMHNVTE 304
           L +     + TE
Sbjct: 300 LEHDFKRLDYTE 311



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 73/190 (38%), Gaps = 29/190 (15%)

Query: 383 NTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQELGIINCNCFEFCWIMDFP 441
             E    RLD  +G      +G   +F C +  D ++    E  ++  +      ++++P
Sbjct: 299 VLEHDFKRLDYTEGIEILKASGRKFEFPCDWGCDLQSE--HERYLVEEHFKRPVILINYP 356

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHM 500
                   K I      F M Q         D  +++A   D++  G  EI  G  R   
Sbjct: 357 --------KDIKA----FYMKQND-------DGKTVRAM--DVLFPGIGEIIGGSEREAD 395

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
              +    + +G++++ +           + G  PH G   G DR+++ + G  N+R+V 
Sbjct: 396 YGKLHARVAELGMNEKELW----WYLDTRRWGSAPHSGFGLGFDRLLLFVTGMTNIRDVQ 451

Query: 561 LFPMSQNFCD 570
            FP +    D
Sbjct: 452 PFPRTPQHAD 461


>gi|255012440|ref|ZP_05284566.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 468

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 58/291 (19%), Positives = 107/291 (36%), Gaps = 27/291 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61
            RT     L     G+ V + GWV   R    + F+ + D   I  V    + D    E 
Sbjct: 5   KRTKIVDVLKSEAFGTTVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDVDKLGDEF 64

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K + +   + ++G++     +  +       +E+ A +IEI   A+    P+  +    
Sbjct: 65  LKPITTGASISVNGILTQSQGKGQS-------VEIQATEIEIFGTADPATYPLQKKGHSM 117

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +   L  R +T       R  +  ++        F    TPI+TAS  EGA    
Sbjct: 118 EFLR-EIAHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQMF 176

Query: 182 VPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDED 224
             +  N              +  F+    +     Q +  L A+   + +   P FR E+
Sbjct: 177 QVTTKNLYDLKKDENGSIIYEDDFFGKQASLTVSGQLEGELAATALGQIYTFGPTFRAEN 236

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
             + R   EF+ ++ E++F +  D +   E  ++   +   +       FL
Sbjct: 237 SNTPRHLAEFWMIEPEVAFNDITDNMELAEEFIKYCVQWALDNCMEDIKFL 287



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P     +E K        F M Q         D  +++A  
Sbjct: 343 HERFLVEDHFKRPVILTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 383

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R    + ++     +GI  + +           + G  PH G   
Sbjct: 384 V-LFPKIGEIIGGSEREADYDKLMTRIDELGIPMKDMW----WYLDTRRFGTVPHSGFGL 438

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G  N+R+V  FP + N
Sbjct: 439 GFERLLLFVTGMANIRDVIPFPRTPN 464


>gi|257867747|ref|ZP_05647400.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257874075|ref|ZP_05653728.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257876652|ref|ZP_05656305.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257801830|gb|EEV30733.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257808239|gb|EEV37061.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257810818|gb|EEV39638.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 432

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 71/298 (23%), Positives = 118/298 (39%), Gaps = 32/298 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
              VG  V++  WV   R  G I FL +RD         V +      F++AK++  E  
Sbjct: 10  KKHVGETVQIGAWVANKRSSGKIAFLQLRDGTAYFQGIVVKSEVGEEVFQLAKNLNQETA 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +   S             E+    +E++  + + P+     +E+       +R 
Sbjct: 70  VLVTGEIREDSRSKF-------GYEIGISGLEVVGESHDYPITP---KEHGTDFLMDHRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II +         FI+   PILT S+PEG  D    +  +Q +
Sbjct: 120 LWLRSSKQHAIMQIRNEIIRATYEFFNKNGFIKIDPPILTGSAPEGTTDLFETNYFDQKA 179

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L
Sbjct: 180 Y--LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESL 236

Query: 251 NTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPD 292
              E  +  + +   +                       F RI YDDA+     +  D
Sbjct: 237 EVQEQYVAFLVQNVLDNCDYALDVLGRDREVLKKYTKLPFPRISYDDAVALLQKNGFD 294



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 38/113 (33%), Gaps = 10/113 (8%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
              A  PF M               I    Y       EI  G  R    E +L+     
Sbjct: 323 YPKAIKPFYMKPHPTREDVVICADMIAPEGY------GEIIGGSERAIDHEYLLEQIRAH 376

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G+     EN +       + G  PH G   G++R V  L G ++VRE   FP 
Sbjct: 377 GLD----ENEYSWYLDLRKYGSVPHTGFGLGLERTVTWLSGIEHVRESIPFPR 425


>gi|295099925|emb|CBK89014.1| Lysyl-tRNA synthetase (class II) [Eubacterium cylindroides T2-87]
          Length = 649

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 66/335 (19%), Positives = 127/335 (37%), Gaps = 24/335 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +  Y   +  +L   +V   V+++G +   R  G   F+ I+D  G  Q+    D    +
Sbjct: 40  VEAYENCTKEELQEKEV--HVKVAGRIMTKRRQGKAGFMHIQDVDGQIQIYVRKDVIGDD 97

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             +  +   +  I G+      E        GQ+ + AQ    LS +   PLP       
Sbjct: 98  QYEIFKKNDIGDIVGI------EGTVMKTDHGQLSVRAQVYTHLSKSLR-PLPEKFHGLT 150

Query: 121 PESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGAR 178
               R++ R++DL  +   K+I + R +II +++  +  +  +E  TP+L        AR
Sbjct: 151 DVEERYRRRYVDLIMNPEAKHIALTRPKIIRAIQHYLDGQGLVEVETPVLQPILGGASAR 210

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+         FY +  A +   + L+  G +  ++I   FR+E   +   P EF  ++
Sbjct: 211 PFVTHHNTLDMDFY-MRIATELPLKRLIVGGLEGVYEIGRLFRNEGMDAMHNP-EFTTVE 268

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTD 289
             +++ +   +++ +E +   V  E      ++           F RI   DAI+     
Sbjct: 269 AYVAYSDLYGMMDLIEGLFDSVANEVLGTTEITYQGQQLSLKAPFKRIHMVDAIKE--AC 326

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
             D    + +          +  V     SV    
Sbjct: 327 GVDFWKEMTLDEAKALAKEHDIEVEKIHNSVGHII 361



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 11/136 (8%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   EE  +       +P ++    +      D     A +Y+L   G E A+     
Sbjct: 364 FFEKYVEETIVQPTFVYGHPTSISP--LAKKNAEDPR--FADRYELFICGHEYANAFSEL 419

Query: 499 HMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      Q F      +E+ ++           A + GMPP GG+  GIDR VMLL   +
Sbjct: 420 NDPIDQRQRFEKQLELRELGDDEANEVDTDYVEALEYGMPPTGGVGLGIDRFVMLLTDQR 479

Query: 555 NVREVSLFPMSQNFCD 570
            +REV LFP  +   D
Sbjct: 480 TIREVLLFPHMKLTKD 495


>gi|167751088|ref|ZP_02423215.1| hypothetical protein EUBSIR_02073 [Eubacterium siraeum DSM 15702]
 gi|167656006|gb|EDS00136.1| hypothetical protein EUBSIR_02073 [Eubacterium siraeum DSM 15702]
          Length = 503

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 67/295 (22%), Positives = 120/295 (40%), Gaps = 23/295 (7%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH    +           V ++G +   R  G   F+DIRD  G  QV    D    +  
Sbjct: 50  THKAQQIRDNFEELEEKDVMIAGRITSWRDMGKANFIDIRDDSGRMQVYVRIDDIGEDNF 109

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  +   +  I G+               G+I + A+ I+ L     LPLP        +
Sbjct: 110 KEFKKWDLGDIVGV------SGFVFKTRRGEISVHAKSIK-LLSKSLLPLPEKWHGLKDK 162

Query: 123 SIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL     +    VKR+ I+  +R  + ++ ++E  TP+L        AR F
Sbjct: 163 EERYRKRYLDLIANPEIKDTFVKRSMILREIRSFLDSKGYLEVDTPVLHTLEIGAAARPF 222

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L    + Y + L+  GFDR +++   FR+E   +   P EF  ++M 
Sbjct: 223 VTHHNALDIDMY-LRIETELYLKRLIVGGFDRVYEVGRIFRNEGMDATHNP-EFTSIEMY 280

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
            ++ +   +++ +E + R V  +    +TV            + R+   +A++ Y
Sbjct: 281 QAYTDYYGMMDLIEEMYRTVALKVCGTDTVPYQGKEIEIGKPWKRMTMKEAVKEY 335



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 49/132 (37%), Gaps = 4/132 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   EEK I      +  P       K          +++   N  E  +     +  
Sbjct: 373 LFEEFVEEKLIQPTI-IYDYPVENSPLAKRKPTDPAFTERFEYFINACEFGNAFSELNDP 431

Query: 502 EVMLQAFSNVGISKEVVENRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
               + F+   + K               A + G+PP GG+  G+DR VMLL  + ++R+
Sbjct: 432 IDQRERFTKQVMEKRKQGANAQIDEDFLTALEYGLPPTGGLGMGLDRFVMLLTDSASIRD 491

Query: 559 VSLFPMSQNFCD 570
           V LFP  +   D
Sbjct: 492 VLLFPTMKPLSD 503


>gi|116051697|ref|YP_789464.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296387793|ref|ZP_06877268.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
 gi|313109106|ref|ZP_07795078.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|122260840|sp|Q02RH2|SYK_PSEAB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|115586918|gb|ABJ12933.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310881580|gb|EFQ40174.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 501

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 140/367 (38%), Gaps = 46/367 (12%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   +  +L  + +   V+++G +   R      F+ ++D     QV  N  +   E 
Sbjct: 52  KQYADKTKEELEAAAI--PVKVAGRIMLNRGS----FIVLQDSSERLQVYVNRKTLPEET 105

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
              +++  +  I G      AE + A    G + +    + +L+ +   PLP        
Sbjct: 106 LAEIKTWDLGDIIG------AEGVLARSGKGDLYVDMTSVRLLTKSLR-PLPDKHHGLTD 158

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
              R++ R++DL  +   ++  + R+++I  +R  +    F+E  TP+L T      A+ 
Sbjct: 159 TEQRYRQRYVDLMVNEETRHTFRVRSQVIAHIRRFLSERGFLEVETPMLQTIPGGAAAKP 218

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F         + + L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  L+ 
Sbjct: 219 FETHHNALDMAMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP-EFTMLEF 276

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D ++  E + R + +       V               YG        P + 
Sbjct: 277 YQAYADYEDNMDLTEELFRELAQAVLGTTDVP--------------YGDKVFHFGEPFVR 322

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V +  +     +      +N   +  AI  K G             A+  G  GL  +
Sbjct: 323 LSVFDSILKYNPEI--SAADLNDVEKARAIAKKAG-------------AKVLGHEGLGKL 367

Query: 360 FWRLDES 366
              + E 
Sbjct: 368 QVMIFEE 374



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K++  H     P       + ND       +++L   G EIA+     + +E   + F
Sbjct: 377 EHKLEQPHFITRYPFEVSPLARRNDEDPSVTDRFELFIGGREIANAYSELNDAEDQAERF 436

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 K+  ++           A + GMPP  G   GIDR+VMLL  + ++R+V LFP 
Sbjct: 437 MLQVKEKDAGDDEAMHYDADFINALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPH 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|148244696|ref|YP_001219390.1| lysyl-tRNA synthetase, class II [Candidatus Vesicomyosocius
           okutanii HA]
 gi|259511539|sp|A5CWL4|SYK_VESOH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|146326523|dbj|BAF61666.1| lysyl-tRNA synthetase, class II [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 496

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 62/278 (22%), Positives = 114/278 (41%), Gaps = 19/278 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G + F+ ++D  G  Q+    D            +W +        
Sbjct: 58  QVSIAGRMMLKRVMGKVSFVHVQDSSGKIQLFVTCDKLPESFYNEQFKKWDIG-----DI 112

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
             A  I      G++ +    I++L+ +   PLP        + IR++ R++DL  +   
Sbjct: 113 IGAIGILFKTNMGELSIRIDDIKLLTKSLR-PLPGKFHGLSDQEIRYRQRYVDLIMNKTS 171

Query: 140 KNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           +N   +R++IIN +R      +FIE  TP+L T      A+ F           Y    +
Sbjct: 172 RNTFKRRSQIINYIRNFFNHHDFIEVETPMLQTIPGGATAKPFETYHNALDMPMY-FRIS 230

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  G ++ F+I   FR+E   +   P EF  ++   ++    D++N  E + 
Sbjct: 231 PELYLKRLIIGGMNKVFEINRNFRNEGLSTRHNP-EFTMIEFYQAYGTYHDLMNLTEKLF 289

Query: 258 RGVFEEFS---------NGNTVSNNFLRICYDDAIRRY 286
           R +  +           N      +F RI   D+I +Y
Sbjct: 290 RSIALDVCGSANVYYQGNNLDFFKSFKRISVVDSILQY 327


>gi|160900680|ref|YP_001566262.1| lysyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|160366264|gb|ABX37877.1| lysyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 519

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/296 (21%), Positives = 119/296 (40%), Gaps = 27/296 (9%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY-----GITQVVANPDSACFEI 61
            S   L    V   V L G +   R  G   F  I+D       G  Q+    D+   E+
Sbjct: 64  KSAEQLDAEAV--QVSLGGRMMLKRVMGKASFATIQDGSLGPTHGRIQLYITRDTVGEEV 121

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             + +   +  I G      AE       TG++ +  Q + +L+ +   P+P        
Sbjct: 122 YAAFKRWDLGDILG------AEGTLMKTKTGELSVKVQTLRLLTKSLR-PMPDKFHGMAD 174

Query: 122 ESIRFKYRFLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
              + + R++DL  D    +  + R++ ++ +R  M+   F+E  TP+L        A+ 
Sbjct: 175 LEQKVRQRYVDLMMDEQARRRFIARSKAVSGIREFMVEHGFLEVETPMLHPIPGGANAKP 234

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++ 
Sbjct: 235 FVTHHNALDQEMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEF 292

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY 286
             ++    D+++  E ++R   ++      ++           F R+   +AI ++
Sbjct: 293 YAAYWNYRDLMDYTEALVRDAAQKAVGTLQLTYGGKPVDLSQPFQRLTIPEAIVKF 348



 Score =  102 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 14/192 (7%)

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA--QELGIINCNCFEFCWI 437
             V+      RL + +    F  AGD +    +  +A   +   +E   ++        +
Sbjct: 328 KPVDLSQPFQRLTIPEAIVKFTEAGDKVADREWLTNALRKLGMTEEKDRLSTRTLASLQV 387

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGG 495
           +   ++E   EEK        F M      S   + ND       +++L   G E  +G 
Sbjct: 388 L---YFEEVVEEKLWQPT---FIMEHPTEISPLARANDERPEVTERFELYITGREFGNGF 441

Query: 496 IRNHMSEVMLQAFSNVGISKEVVEN---RFGG-LYRAFQCGMPPHGGIAAGIDRIVMLLL 551
              + +E     F+    +K+  ++    F     RA + GMPP GG   GIDR++MLL 
Sbjct: 442 SELNDAEDQAARFNAQVQAKDGGDDEAMYFDHDFVRALEYGMPPTGGCGIGIDRLMMLLT 501

Query: 552 GAKNVREVSLFP 563
            + ++R+V LFP
Sbjct: 502 DSASIRDVILFP 513


>gi|332236935|ref|XP_003267655.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 1
           [Nomascus leucogenys]
          Length = 501

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 87/379 (22%), Positives = 149/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL        V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTTQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--------- 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +         
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 118 ----REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                   +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F       N       F      LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    + ++ +    ++F +  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 345 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 394

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 395 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 445

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 446 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501


>gi|229019778|ref|ZP_04176581.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229026005|ref|ZP_04182389.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735286|gb|EEL85897.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228741503|gb|EEL91700.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 463

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 131/376 (34%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
                   V++SGW+  +R      F+++ D       Q+V + +   F+    +     
Sbjct: 13  TEKYADQTVQVSGWIRNLRDSKAFGFIELNDGSFFKGVQIVFDTELENFKEIAKLPLSSS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G V++               E+ A+KI+I  +++    P+  +R   E +R     
Sbjct: 73  VKVEGTVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++        F+   TPI+T S  EGA +    +  +   
Sbjct: 124 LRPRTNAFSATFRVRSVAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 VPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F E  D+++  E++L+   +           F                   
Sbjct: 244 FWMVEPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              RI Y +AI+       D + P+   +   TEH  +    +F + + V    +     
Sbjct: 304 DFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  RMNE
Sbjct: 361 -------KAFYMRMNE 369



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M           D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMRMNE-------DGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|196034320|ref|ZP_03101729.1| asparaginyl-tRNA synthetase [Bacillus cereus W]
 gi|218232058|ref|YP_002369357.1| asparaginyl-tRNA synthetase [Bacillus cereus B4264]
 gi|195992862|gb|EDX56821.1| asparaginyl-tRNA synthetase [Bacillus cereus W]
 gi|218160015|gb|ACK60007.1| asparagine--tRNA ligase [Bacillus cereus B4264]
          Length = 463

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/353 (18%), Positives = 123/353 (34%), Gaps = 51/353 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCID 74
            G  V++SGW+  +R      F+++ D      V    + +   F+    +     + ++
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V++               E+ A+KI+I  +++    P+  +R   E +R     L  R
Sbjct: 77  GKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+   TPI+T S  EGA +    +  +       
Sbjct: 128 TNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVPKG 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGQVDETKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E  D++N  E++L+   +           F                      R
Sbjct: 248 EPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           I Y +AI+       D + P+   +   TEH  +    +F + + V    +  
Sbjct: 308 ITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI 360



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 70/204 (34%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M          +D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMR-------LNDDGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|255994120|ref|ZP_05427255.1| lysine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993788|gb|EEU03877.1| lysine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 507

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 61/303 (20%), Positives = 124/303 (40%), Gaps = 22/303 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V  +G +   R  G   F+DI+D  G  Q     D    E  +  ++  +  I G+ 
Sbjct: 64  GKEVSCAGRIMANRHMGKASFIDIKDKLGRIQCYIRQDEITPEEYEVFKTYDIGDIVGV- 122

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                +        G+I +    I +LS + +  LP   +    + +R++ R++DL  + 
Sbjct: 123 -----KGSVFKTRHGEISIRVSDIALLSKSLQ-VLPDKFKGLKDQDLRYRQRYVDLIVND 176

Query: 138 LHKNIVK-RTRIINSMRCRM-IAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYAL 194
              +  + R  II  +R  +     F++  TP+LT  +    AR F             L
Sbjct: 177 DVADTFRKRAAIIKEIRRYLEDDRGFLDVDTPVLTTIAGGANARPFNTHHNTLDLDM-KL 235

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             + + Y + L+  G DR +++   FR+E    +  P EF  +++  ++ + D +++  E
Sbjct: 236 RISNELYLKRLIVGGLDRVYEMGKMFRNEGMDRNHNP-EFTSMELYQAYGDMDTVMDITE 294

Query: 255 NVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGT-DKPDLRNPIIMHNVTE 304
           N++  V E+ +    ++           + RI   DA++++   D   ++       V +
Sbjct: 295 NLIAKVSEKVNGSMKITYQGKEFDLTPPWDRITMVDAVKKWANEDFDKIQTDEEAIEVAK 354

Query: 305 HFV 307
              
Sbjct: 355 KHK 357



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 8/131 (6%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           F  Y  +  E  I    +P  +          +D    +  +++   N +E+A+G    +
Sbjct: 374 FEMYCEDHLEGPIFVTGHPVEISPLSKRD--SSDPRITR--RFEAYINCWEVANGFSELN 429

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                L+ F +     +  ++           A + G+PP GG+  GIDR++ML+  A +
Sbjct: 430 DPIDQLKRFKSQQEQLDAGDDEAHPMDEDFVNALEVGLPPTGGLGIGIDRVIMLITNAAS 489

Query: 556 VREVSLFPMSQ 566
           +R+V LFP  +
Sbjct: 490 IRDVILFPTMK 500


>gi|332886410|gb|EGK06654.1| lysyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 575

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 62/324 (19%), Positives = 129/324 (39%), Gaps = 25/324 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V L+G +   R  G   F++++D  G  QV  + D  C +  K + +     +  +    
Sbjct: 55  VSLAGRIMGRRIMGKASFMELQDSEGRIQVYISRDDLCPDENKELYNTIFKKLLDIGDFV 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVF------GEREYPESIRFKYRFLDLR 134
             +        G+I + A+++ +L  +      V        +       R++ R++DL 
Sbjct: 115 GVKGFVFRTQMGEISVHAEELTVLGKSLRPLPVVKVKDGVTYDGFTDPEQRYRQRYVDLV 174

Query: 135 RDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +   K+  +KRT++ NSMR  +    +IE  TP+L +      AR F+          Y
Sbjct: 175 VNDNVKDVFIKRTKVFNSMREFLNGHGYIEVDTPVLQSIPGGATARPFITHHNALDIPLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GFD  ++ +  FR+E       P EF  ++   ++ + + +++ 
Sbjct: 235 -LRIANELYLKRLIVGGFDGVYEFSRNFRNEGMDRTHNP-EFTVMEFYAAYKDYNWMMDF 292

Query: 253 MENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY------GTDKPDLRNPI 297
            E +L  +  +                   + R+   D+I+ +      G D+  LR+  
Sbjct: 293 TERMLEKICTDVHGTTKVKMGDKEIDYKAPYPRVTMIDSIKHFTGFDISGMDEDQLRDVC 352

Query: 298 IMHNVTEHFVHSEFRVFSKILSVN 321
              ++ +     + ++   I    
Sbjct: 353 KQLDIEQDATMGKGKLIDAIFGEK 376



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 71/177 (40%), Gaps = 12/177 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+A+     +        F
Sbjct: 378 EGNYIQPTFIIDYPVEMSPLTKKHRNNPELTERFELMVNGKELANAYSELNDPIDQRARF 437

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +     E  ++          RA + GMPP  GI  G+DR+VM + G ++++EV  FP 
Sbjct: 438 EDQLKLSEKGDDEAMFIDQDFLRALEYGMPPTSGIGIGMDRLVMFMTGQESIQEVMFFPQ 497

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLR--IVENPKKILKISVTTILRNVYGLKIIHSI 619
            +        +P   +V +  ELG+   +V   +K    +V + +++V   KI   I
Sbjct: 498 MRPEK-----APKKDAVSKYEELGIAEDLVPVLQKAGYFTVES-MKDVNSQKIRQDI 548


>gi|329765408|ref|ZP_08256988.1| aspartyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138314|gb|EGG42570.1| aspartyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 428

 Score =  192 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 73/310 (23%), Positives = 139/310 (44%), Gaps = 25/310 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           +TH   +L    +G  V L GWV  +R  G + F+ +RD  GI+Q++   +    +  + 
Sbjct: 5   KTHDISELNSGIIGKEVVLGGWVEDLRKLGKMTFITLRDVSGISQIIVKGELN--DNLEE 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123
           +  + V+ + G+V    A            E+ A++I++L+ A   LP+   G  E    
Sbjct: 63  LNRQSVISVRGIVQETKARDF-------DFEIKAEEIDVLAKAIHPLPVDPIGRLESNID 115

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R  +R LD+R          R  ++  +R  +  + FIE +TP +  S+ EG  +    
Sbjct: 116 TRLNHRALDMRNQKTASIFKLRHHVLEILRKTLAEKKFIEITTPKIIGSASEGGANLFSL 175

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++ A  Q+PQ YK+  M  G +R ++I+  +R E+  + R   EF  +D+E +F
Sbjct: 176 DYFGKTAYLA--QSPQLYKEQ-MTIGLERVYEISNFYRAENSHTGRHLSEFTSIDIEAAF 232

Query: 244 VEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYGTDKP 291
           ++ +D++N +E+++  V++  S                  + F RI Y   I        
Sbjct: 233 MDYNDVMNILESLVMEVYKFVSVNCKKEQENIGHTIEIPKSPFERITYTQVIEELKKVGE 292

Query: 292 DLRNPIIMHN 301
            +     + +
Sbjct: 293 KIEFGDDLLD 302



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 30/168 (17%)

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463
           G+ ++F     D+   I      I  N   F ++ D+P                PF    
Sbjct: 291 GEKIEFGDDLLDSHLRI------IGKNHPGFYFLTDWPM------------KLKPFY--- 329

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                ++  D  S  +  +DL     E++SGG R H  E +       G+       +F 
Sbjct: 330 -----IREKDEDSKLSRSFDLQYGYLELSSGGTRLHNPETLKSRLKEQGLDPT----QFA 380

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
              + F  GMPPH G   G+DR++  L+G  NVREV L+P   +    
Sbjct: 381 DHLQTFDWGMPPHSGWGMGLDRLMTTLIGIDNVREVVLYPRDPDRLSP 428


>gi|298374691|ref|ZP_06984649.1| asparagine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298269059|gb|EFI10714.1| asparagine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 468

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 58/291 (19%), Positives = 107/291 (36%), Gaps = 27/291 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61
            RT     L     G+ V + GWV   R    + F+ + D   I  V    + D    E 
Sbjct: 5   KRTKIVDVLKSEAFGTTVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDVDKLGDEF 64

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K + +   + ++G++     +  +       +E+ A +IEI   A+    P+  +    
Sbjct: 65  LKPITTGASISVNGILTQSQGKGQS-------VEIQATEIEIFGTADPATYPLQKKGHSM 117

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +   L  R +T       R  +  ++        F    TPI+TAS  EGA    
Sbjct: 118 EFLR-EIAHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQMF 176

Query: 182 VPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDED 224
             +  N              +  F+    +     Q +  L A+   + +   P FR E+
Sbjct: 177 QVTTKNLYDLKKDENGSIIYEDDFFGKQASLTVSGQLEGELAATALGQIYTFGPTFRAEN 236

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
             + R   EF+ ++ E++F +  D +   E  ++   +   +       FL
Sbjct: 237 SNTPRHLAEFWMIEPEVAFNDITDNMELAEEFIKYCVQWALDNCMEDIKFL 287



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P     +E K        F M Q         D  +++A  
Sbjct: 343 HERFLVEDHFKRPVILTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 383

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R    + ++     +GI  + +           + G  PH G   
Sbjct: 384 V-LFPKIGEIIGGSEREADYDKLMTRIDELGIPMKDMW----WYLDTRRFGTVPHSGFGL 438

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G  N+R+V  FP + N
Sbjct: 439 GFERLLLFVTGMANIRDVIPFPRTPN 464


>gi|269217201|ref|ZP_06161055.1| lysine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269129338|gb|EEZ60423.1| lysine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 509

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 65/288 (22%), Positives = 114/288 (39%), Gaps = 19/288 (6%)

Query: 6   THSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           +H   DL  +             V++SG +  +R  G I F+ IRD  G  Q+    +  
Sbjct: 50  SHHARDLEEAYADLEDGASTEDVVKVSGRIMAIRNQGKIAFIVIRDLTGDIQLFCRVNIL 109

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E    V+   V    G      AE        GQ+ ++   + +LS +   PLP    
Sbjct: 110 GEEAYDDVKDLDVGDWVG------AEGTVIRTRRGQLSVAPTSVRLLSKSLR-PLPEKFH 162

Query: 118 REYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPE 175
               + IR++ R++DL  +  +    VKR  I++++R  M ++ F E  TP+L       
Sbjct: 163 GLSDKEIRYRQRYVDLVMNQDVRDTFVKRFAIVSAIRRYMESQGFFEVETPMLQPIMGGA 222

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+         FY L  A +   + L+  G +R F+I   FR+E       P EF 
Sbjct: 223 NARPFVTHHNALDMDFY-LRIATELPLKRLLVGGLERVFEIGRIFRNEGMDPYHNP-EFT 280

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
            ++   +F + + +++    +++   +       V      I      
Sbjct: 281 TIEAYQAFSDLEGMMDLTRGMIQAAAQAACGTLQVEYQGRAIDLSGTW 328



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 4/92 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMP 534
            ++++L   G E A+     +      + F+    +K    +          RA + GMP
Sbjct: 414 TYRFELFICGHEYANAFNELNDPIDQEERFAAQMEAKAGGDDEAMEYDSDYIRALEYGMP 473

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P GG+  GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 474 PAGGVGVGIDRLVMLLTDSETIRDVLLFPHMR 505


>gi|228987808|ref|ZP_04147917.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228771856|gb|EEM20313.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|324328451|gb|ADY23711.1| asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 463

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/353 (18%), Positives = 123/353 (34%), Gaps = 51/353 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCID 74
            G  V++SGW+  +R      F+++ D      V    + +   F+    +     + ++
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V++               E+ A+KI+I  +++    P+  +R   E +R     L  R
Sbjct: 77  GKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+   TPI+T S  EGA +    +  +       
Sbjct: 128 TNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVPKG 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E  D++N  E++L+   +           F                      R
Sbjct: 248 EPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           I Y +AI+       D + P+   +   TEH  +    +F + + V    +  
Sbjct: 308 ITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI 360



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M          +D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMR-------LNDDGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G+     E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMK----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|118418931|gb|ABK87350.1| asparagine--tRNA ligase [Bacillus thuringiensis str. Al Hakam]
          Length = 475

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/353 (18%), Positives = 123/353 (34%), Gaps = 51/353 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCID 74
            G  V++SGW+  +R      F+++ D      V    + +   F+    +     + ++
Sbjct: 29  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 88

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V++               E+ A+KI+I  +++    P+  +R   E +R     L  R
Sbjct: 89  GKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAHLRPR 139

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+   TPI+T S  EGA +    +  +       
Sbjct: 140 TNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVPKD 199

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 200 EDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMV 259

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E  D++N  E++L+   +           F                      R
Sbjct: 260 EPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGR 319

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           I Y +AI+       D + P+   +   TEH  +    +F + + V    +  
Sbjct: 320 ITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI 372



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 70/204 (34%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 296 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 355

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M          +D  ++ A   DL+  
Sbjct: 356 EEIFKRPVFVTDYP--------KDIKA----FYMR-------LNDDGKTVAAT--DLLVP 394

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 395 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 450

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 451 LMYITGMANIRDVIPFPRTPGSSE 474


>gi|90962323|ref|YP_536239.1| lysyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227891608|ref|ZP_04009413.1| lysyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|90821517|gb|ABE00156.1| Lysyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227866755|gb|EEJ74176.1| lysyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|300214973|gb|ADJ79389.1| Lysyl-tRNA synthetase [Lactobacillus salivarius CECT 5713]
          Length = 495

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 65/351 (18%), Positives = 132/351 (37%), Gaps = 27/351 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           ++   +  +L   D+     ++G +   R  G + F D++D  G  Q+    D    E+ 
Sbjct: 45  KFEDKTKEEL--IDLDVKATIAGRMVAKRGKGKVGFADLQDKTGRMQLYIRKDEVGEEMY 102

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              +   +    G  +  + + I  ++  G++ +   K+  LS A   PLP         
Sbjct: 103 HIFKRSDL----GDFLGVTGDVIKTDM--GELTIKVTKLTFLSKALR-PLPDKFHGLQNV 155

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDF 180
              ++ R+LDL  +    N    R++I+ ++R  + +  F+E  TP+L   +    AR F
Sbjct: 156 EQIYRQRYLDLITNRESYNRFVNRSKIVTAVRNYLDSNGFLEVETPVLHNQAGGAAARPF 215

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + + + L+  G +R ++I   FR+E   +   P EF  L+  
Sbjct: 216 ITHHNALDIQLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTKHNP-EFTMLETY 273

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ +  D+++  E + +   +                 D  I   GTD  D        
Sbjct: 274 AAYFDFKDVMDETEGIFKAAAKVV-------------TSDGKINYQGTDV-DFNKEFKRV 319

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           ++ +         F K +S+    ++                 +NE+    
Sbjct: 320 HMVDLIKEKTGVDFWKEMSLEEARKIADEHKVHYEPYWQVGHIINEFFEQF 370



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 78/224 (34%), Gaps = 25/224 (11%)

Query: 357 AYIFWRLDESGNVAGMGPVAK--------HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
           AY  ++             AK        +    + +  +    +   D      G    
Sbjct: 275 AYFDFKDVMDETEGIFKAAAKVVTSDGKINYQGTDVDFNKEFKRVHMVDLIKEKTGVDFW 334

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCW-----IMDFPFYEWNEEEKKIDFAHNPFTMPQ 463
                 +AR  IA E  +     +E  W     I +F  +E   E+  +D         +
Sbjct: 335 KEMSLEEAR-KIADEHKV----HYEPYWQVGHIINEF--FEQFCEDTIVDPTFVYGHPVE 387

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
               + K  D       +++L   G E A+     +      Q F      ++   +   
Sbjct: 388 ISPLAKKNAD-DPRFTDRFELFILGNEYANAFTELNDPIDQRQRFEAQVAERQAGNDEAE 446

Query: 524 G----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G       A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 447 GIDEDYIEAMEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 490


>gi|325571049|ref|ZP_08146621.1| asparagine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325156134|gb|EGC68320.1| asparagine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 432

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 71/298 (23%), Positives = 118/298 (39%), Gaps = 32/298 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
              VG  V++  WV   R  G I FL +RD         V +      F++AK++  E  
Sbjct: 10  KKHVGETVQIGAWVANKRSSGKIAFLQLRDGTAYFQGIVVKSEVGEEVFQLAKNLNQETA 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +   S             E+    +E++  + + P+     +E+       +R 
Sbjct: 70  VLVTGEIREDSRSKF-------GYEIGISGLEVVGESHDYPITP---KEHGTDFLMDHRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II +         FI+   PILT S+PEG  D    +  +Q +
Sbjct: 120 LWLRSSKQHAIMQIRNEIIRATYEFFNKNGFIKIDPPILTGSAPEGTTDLFETNYFDQKA 179

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L
Sbjct: 180 Y--LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESL 236

Query: 251 NTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPD 292
              E  +  + +   +                       F RI YDDA+     +  D
Sbjct: 237 EVQEQYVAFLVQNVLDNCDYALDVLGRDREVLKKYTKLPFPRISYDDAVELLQKNGFD 294



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 38/113 (33%), Gaps = 10/113 (8%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
              A  PF M               I    Y       EI  G  R    E +L+     
Sbjct: 323 YPKAIKPFYMKPHPTREDVVICADMIAPEGY------GEIIGGSERAIDHEYLLEQIRAH 376

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G+     EN +       + G  PH G   G++R V  L G ++VRE   FP 
Sbjct: 377 GLD----ENEYSWYLDLRKYGSVPHTGFGLGLERTVTWLSGIEHVRESIPFPR 425


>gi|313204393|ref|YP_004043050.1| asparaginyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312443709|gb|ADQ80065.1| asparaginyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 465

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 58/288 (20%), Positives = 108/288 (37%), Gaps = 23/288 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L  +D G+ V + GWV   R +  + F+ + D   I  +    D+  F     
Sbjct: 3   RTVIVDALKRTDFGAEVNIKGWVRTRRGNKNVSFIALNDGSTINNIQVVADNEKFG---- 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
                     G  +S + + + +      +E+ A+KIEI  +A+    P+  +    E +
Sbjct: 59  -DEYLKPITTGACISVTGKLVESLGQGQHVEIQAEKIEIYGIADPESYPLQKKGHTMEFL 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R +   L  R +T       R  +  ++        F    TPI+TAS  EGA      +
Sbjct: 118 R-EIAHLRPRTNTFGAVFRVRHNMAMAIHTFFHERGFFYFHTPIITASDCEGAGQMFQVT 176

Query: 185 RVNQ--------------GSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            +N                 F+    +     Q +  L A      +   P FR E+  +
Sbjct: 177 TMNLYDLKKDETGQIDYSNDFFGKQASLTVSGQLEGELAAMSMGAIYTFGPTFRAENSNT 236

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            R   EF+ ++ E++F E  + +   ++ ++   +   +      +FL
Sbjct: 237 PRHLSEFWMIEPEVAFNEIAENMQLAQDFIQYCVKWALDNCKDDLDFL 284



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 4/99 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +K ND          L     EI  G  R      +      +G+  + +          
Sbjct: 367 MKQNDDGKTVRAMDVLFPKIGEIIGGSQREEDYLKLKTRADEMGVPTKDIW----WYLET 422

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+++ + G  N+R+V  FP + N
Sbjct: 423 RKFGTAPHSGFGLGFERLLLFVTGMSNIRDVIPFPRTPN 461


>gi|298488302|ref|ZP_07006334.1| Lysyl-tRNA synthetase (class II) [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298157124|gb|EFH98212.1| Lysyl-tRNA synthetase (class II) [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 500

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 66/306 (21%), Positives = 123/306 (40%), Gaps = 34/306 (11%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTTVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +  + +    R+++I  +R  ++  +F+E  TP+L T  
Sbjct: 151 KHNGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAI 283
           EF  L+   ++ + +D ++  E + R + +                    F+R+   D+I
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFVRLSVFDSI 328

Query: 284 RRYGTD 289
            +Y  D
Sbjct: 329 LKYNPD 334



 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K++  H     P       + ND       +++L   G EIA+     + +E   + F
Sbjct: 376 EHKLEQPHFITQYPFEVSPLARRNDENPSVTDRFELFIGGREIANAYSELNDAEDQAERF 435

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 K+  ++          RA + GMPP  G   GIDR+VMLL  + ++R+V LFP 
Sbjct: 436 QAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPH 495

Query: 565 SQ 566
            +
Sbjct: 496 MR 497


>gi|229184424|ref|ZP_04311631.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228599220|gb|EEK56833.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 432

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A F 
Sbjct: 5   MKRSLTKEC----TEKSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGF- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++  
Sbjct: 60  ---KVDVESIVHVIGEIVETSKTEL-------GVEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEKELQLLQI 266



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 63/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     S+  
Sbjct: 297 GDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTMPHKENASITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+      + F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DTFQSYLNTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERVVYKLLELSNVREASAFPRD 426


>gi|49481692|ref|YP_038607.1| asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|162382772|ref|YP_896857.2| asparaginyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|229186812|ref|ZP_04313967.1| Asparaginyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|59798536|sp|Q6HCW9|SYN_BACHK RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|49333248|gb|AAT63894.1| asparagine--tRNA ligase (asparaginyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|228596549|gb|EEK54214.1| Asparaginyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 463

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/353 (18%), Positives = 123/353 (34%), Gaps = 51/353 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCID 74
            G  V++SGW+  +R      F+++ D      V    + +   F+    +     + ++
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V++               E+ A+KI+I  +++    P+  +R   E +R     L  R
Sbjct: 77  GKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+   TPI+T S  EGA +    +  +       
Sbjct: 128 TNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVPKD 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E  D++N  E++L+   +           F                      R
Sbjct: 248 EPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           I Y +AI+       D + P+   +   TEH  +    +F + + V    +  
Sbjct: 308 ITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI 360



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 70/204 (34%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M          +D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMR-------LNDDGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|301056067|ref|YP_003794278.1| asparaginyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378236|gb|ADK07140.1| asparaginyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
           CI]
          Length = 463

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/353 (18%), Positives = 123/353 (34%), Gaps = 51/353 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCID 74
            G  V++SGW+  +R      F+++ D      V    + +   F+    +     + ++
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V++               E+ A+KI+I  +++    P+  +R   E +R     L  R
Sbjct: 77  GKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+   TPI+T S  EGA +    +  +       
Sbjct: 128 TNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVPKG 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGQVDETKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E  D++N  E++L+   +           F                      R
Sbjct: 248 EPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           I Y +AI+       D + P+   +   TEH  +    +F + + V    +  
Sbjct: 308 ITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI 360



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M          +D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMR-------LNDDGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G+     E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMK----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|220905534|ref|YP_002480846.1| asparaginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869833|gb|ACL50168.1| asparaginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 454

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/350 (18%), Positives = 126/350 (36%), Gaps = 42/350 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L  +     + L GW+   R      F++I D   +   Q + +  +   +  
Sbjct: 3   RTLIIDALNSTSAQPAIVLCGWIRTRRDAKDFSFVEINDGSCLANMQCIVDAGTPAHQGL 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
               +   + + G ++S   +         Q E+ A  +++  +A+    P+  +R   E
Sbjct: 63  GDAATGAAVRVTGELVSSPGKG-------QQWEVRAHDVQVYGLADPENFPLQKKRHSDE 115

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R     L  R +        R+    ++     +  F    TP+LT +  EGA +   
Sbjct: 116 FLR-TIAHLRPRTNKYGAVFRIRSEAGFAVHDFFRSRRFAWVHTPVLTGADCEGAGEMFR 174

Query: 183 PSRVNQG------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            + +  G       F++         Q +   +A+G  R +   P FR E+  + R   E
Sbjct: 175 VTTLEPGAKNLDQDFFSRQCNLTVSGQLEAEALATGLGRVYSFGPTFRAENSNTPRHAAE 234

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSN 272
           F+ ++ EM+F + +D++   E + R V +                          + ++ 
Sbjct: 235 FWMIEPEMAFADLEDLMELGEGLTRHVVDHVLTRCESDVNLFDSFVDKGLRQRLQDMLAA 294

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSV 320
            F R+ Y +A+        D   P+       TEH  +     F K + V
Sbjct: 295 PFGRVSYTEAVEILQKSGKDFAFPVAFGTDLQTEHERYLAEEHFKKPVIV 344



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 47/145 (32%), Gaps = 24/145 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +   + D+P        K I      F M Q               A  
Sbjct: 329 HERYLAEEHFKKPVIVYDYP--------KDIKA----FYMRQNED--------GKTVAAM 368

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    E+  G  R      +      +G +       +       + G  PH G   
Sbjct: 369 DMLVPRIGELIGGSQREERLPTLEARIREMGHNP----EDYWWYLELRRFGTVPHAGFGL 424

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           G +R++MLL G  N+R+V  FP + 
Sbjct: 425 GFERLLMLLTGITNIRDVIPFPRTP 449


>gi|42783731|ref|NP_980978.1| asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|59798564|sp|Q72ZI3|SYN_BACC1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|42739661|gb|AAS43586.1| asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 463

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/353 (18%), Positives = 122/353 (34%), Gaps = 51/353 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCID 74
            G  V++SGW+  +R      F+++ D      V    + +   F+    +     + ++
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V+                E+ A+KI+I  +++    P+  +R   E +R     L  R
Sbjct: 77  GKVIVTPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+   TPI+T S  EGA +    +  +       
Sbjct: 128 TNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVPKG 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E  D++N  E++L+   +           F                      R
Sbjct: 248 EPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           I Y +AI+       D + P+   +   TEH  +    +F + + V    +  
Sbjct: 308 ITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI 360



 Score = 77.4 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 70/204 (34%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M          +D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMR-------LNDDGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|17231150|ref|NP_487698.1| asparaginyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|20139875|sp|P58692|SYN_ANASP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|17132791|dbj|BAB75357.1| asparaginyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 463

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 71/355 (20%), Positives = 132/355 (37%), Gaps = 51/355 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY--GITQVVANPDSACFEIA-KSVRSE 68
           L        + + GWV   R   G  F+++ D    G  QVV N D   + +  K + + 
Sbjct: 10  LRSGQPDESLVVQGWVRTKRELKGFAFIEVNDGSSLGNLQVVINQDLPDYAVIVKQLNTG 69

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + ++G++++   +         +IEL A+ +++   A+    P+  +R   E +R   
Sbjct: 70  ASVEVNGVLVASQGKG-------QRIELKAEAVKVYGEADPETYPLQKKRHSFEFLR-TI 121

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R ++       R     ++        F+   TPI+TAS  EGA +    + ++ 
Sbjct: 122 GHLRSRTNSFGAVFRVRNACSAAIHQFFQERGFLWVHTPIITASDCEGAGELFSVTSLDL 181

Query: 189 G--------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+A P       Q +  +MA  F   +   P FR E+  + R  
Sbjct: 182 KQIPRTENQGIDYSQDFFAKPTYLTVSGQLEAEVMAMAFSNVYTFGPTFRAENSNTSRHL 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS-------------------- 271
            EF+ ++ EM+F + +  ++  E  L+ +F                              
Sbjct: 242 AEFWMVEPEMAFCDLEGDMDLAEAFLKHIFNHVLEKCPEDMEFFNQRIDNTVLATAENII 301

Query: 272 -NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
            N F R+ Y DAI+           P+   +   +EH  +   ++F K + V   
Sbjct: 302 NNQFERLTYTDAIKLLEKADVKFEYPVSWGLDLQSEHERYLAEQLFKKPVIVTDY 356



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 48/136 (35%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEI 491
           +   + D+P                 F M     E +++  D+L+ K           EI
Sbjct: 349 KPVIVTDYP------------AQIKAFYMRLSDDEKTVRAMDVLAPKIG---------EI 387

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    +V+ +     G+  E +           + G  PH G   G +R+V  + 
Sbjct: 388 IGGSQREERLDVLERRVLAQGMQPEDLW----WYLDLRRYGTVPHAGFGLGFERLVQFIT 443

Query: 552 GAKNVREVSLFPMSQN 567
           G  N+R+V  FP +  
Sbjct: 444 GMGNIRDVIPFPRTPQ 459


>gi|237739093|ref|ZP_04569574.1| lysyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423693|gb|EEO38740.1| lysyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 493

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 58/310 (18%), Positives = 119/310 (38%), Gaps = 14/310 (4%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + +G +  +R  G + F  I D  G  Q+    D         +     +   G ++   
Sbjct: 57  KTAGRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGENEFDHIVKMLNV---GDIIGVE 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E    +  T ++ L  + I +L+      LP          IR++ R++DL  +   ++
Sbjct: 114 GELFVTH--TEELTLRVKSISLLTK-NVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRD 170

Query: 142 -IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
             +KRT+II +++  +    F+E  TP++       A    V           L  AP+ 
Sbjct: 171 TFIKRTQIIKAVKKYLDDRGFLEVETPLMHPILGGAAAKPFVTHHNALNLDLFLRIAPEL 230

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF+R +++   FR+E   +   P EF  +++  S     D+++  E ++  V
Sbjct: 231 YLKKLIVGGFERVYELGRNFRNEGISTRHNP-EFTMIELYQSHANFHDMMDLCEGIISSV 289

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKP------DLRNPIIMHNVTEHFVHSEFRVF 314
            +E +    +  + +++   +  R +  D        D    +      +        V 
Sbjct: 290 CQEVNGTTDIEYDGVQLSLKNFQRVHMVDMIKDVTGVDFWQEMTFEEAKKLAKEHHVEVA 349

Query: 315 SKILSVNPGY 324
             + SV    
Sbjct: 350 DHMDSVGHVI 359



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE ++      +  P       K N+       +++L  N  E A+     +  
Sbjct: 362 FFEQKCEE-RVVQPTFVYGHPVEISPLAKRNEKNPNFTDRFELFINKREYANAFTELNDP 420

Query: 502 EVM-----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                    Q    +  ++E           A + G+PP GG+  GIDR+VMLL GA ++
Sbjct: 421 ADQRGRFEAQVEEALRGNEEATPEIDESFVEALEYGLPPTGGMGIGIDRLVMLLTGAPSI 480

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 481 RDVILFPQMK 490


>gi|186681358|ref|YP_001864554.1| asparaginyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186463810|gb|ACC79611.1| asparaginyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 463

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 71/355 (20%), Positives = 131/355 (36%), Gaps = 51/355 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSE 68
           L         ++ GWV   R   G  F+++ D   +   QVV N D   +E I K + + 
Sbjct: 10  LRSGQPDESFQVQGWVRTKRESKGFAFIEVNDGSSLANLQVVINQDLPDYEAILKKLNTG 69

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             +   G++++   +         +IEL A+ +++   A+    P+  +R   E +R   
Sbjct: 70  AAVEATGVLVASLGKG-------QRIELKAESVKVYGEADPDTYPLQKKRHSFEFLR-TI 121

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R ++       R     ++        F+   TPI+TAS  EGA +    + ++ 
Sbjct: 122 GHLRSRTNSFGAVFRVRNACSTAIHQFFQQRGFLWVHTPIITASDCEGAGELFSVTSLDL 181

Query: 189 G--------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+A P       Q +  +MA  F   +   P FR E+  + R  
Sbjct: 182 KNIPRTENQAVDYSQDFFAKPTYLTVSGQLEAEVMAMAFSNVYTFGPTFRAENSNTSRHL 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS-------------------- 271
            EF+ ++ EM+F + +  ++  E  L+ +F+                             
Sbjct: 242 AEFWMVEPEMAFCDLEGDMDLAEAFLKHIFKYVLETCPEDMEFFNERIDKSVLATAENII 301

Query: 272 -NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
            N F R+ Y +AI+           P+   +   +EH  +   + F K + V   
Sbjct: 302 NNQFERLTYTEAIKVLEKADVKFEYPVSWGLDLQSEHERYLAEQQFKKPVIVTDY 356



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 49/139 (35%), Gaps = 26/139 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEI 491
           +   + D+P                 F M     E +++  D+L+ K           EI
Sbjct: 349 KPVIVTDYP------------AQIKAFYMRLNDDEKTVRAMDILAPKIG---------EI 387

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    EV+ +     G+  E +           + G  PH G   G +R+V  + 
Sbjct: 388 VGGSQREERLEVLERRVLAQGLKPEELW----WYLDLRRYGTVPHAGFGLGFERLVQFMT 443

Query: 552 GAKNVREVSLFPMSQNFCD 570
           G  N+R+V  FP +    +
Sbjct: 444 GMGNIRDVIPFPRTPQSAE 462


>gi|333031523|ref|ZP_08459584.1| Lysyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332742120|gb|EGJ72602.1| Lysyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 576

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 74/344 (21%), Positives = 135/344 (39%), Gaps = 24/344 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             VR++G +   R  G   F++++D  G  QV    D  C +  KS+ +     +  L  
Sbjct: 54  QRVRIAGRMMSRRVMGKASFMELQDSKGRIQVYITRDDICPDEDKSMYNTVFKKLLDLGD 113

Query: 79  SRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREY-----PESIRFKYRFLD 132
               E        G+I + A+KI ILS + + LP+    + E         +R++ R++D
Sbjct: 114 FVGIEGFVFRTKMGEISVHAEKITILSKSIKPLPIVKHKDGETYDSFDDPEMRYRRRYVD 173

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +  +    +KRT+I NSMR       +IE  TP+L        AR F+         
Sbjct: 174 LAVNEGIKDIFIKRTKIYNSMRDFFNTRGYIEVETPVLQPIPGGAAARPFITHHNALDMP 233

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ + + ++
Sbjct: 234 LY-LRIANELYIKRLVVGGFDGVYEFSRNFRNEGMDRTHNP-EFTVMEIYVAYKDYNWMM 291

Query: 251 NTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY-GTDKPDLRNPIIMH 300
              E ++  +  + +                 F RI   D+I+ + G D     N     
Sbjct: 292 CFTEQMIEKICLDVNGTTKVKVGENEIDFKAPFKRITMLDSIKEFTGYDL----NGKSED 347

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            + E        +   +       E++    +G      F    
Sbjct: 348 EIREICKKLNLEIDETMGKGKLIDEIFGEFCEGNYIQPTFITDY 391



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 25/143 (17%)

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             N  +  +I D+P               +P T        L           +++L+ N
Sbjct: 379 EGNYIQPTFITDYP------------IEMSPLTKKHRDNPDL---------TERFELMAN 417

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGI 543
           G E+ +     +     L  F +     E  ++          RA + GMPP  G+  G+
Sbjct: 418 GKELCNAYSELNDPIDQLARFQDQLKLSEKGDDEAMFIDMDFVRALEYGMPPTAGMGIGM 477

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR+VMLL G ++++EV  FP  +
Sbjct: 478 DRLVMLLTGQESIQEVLFFPQMR 500


>gi|152984795|ref|YP_001346822.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|166229817|sp|A6V187|SYK_PSEA7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|150959953|gb|ABR81978.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 501

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 141/367 (38%), Gaps = 46/367 (12%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   +  +L  + +   V+++G +   R      F+ ++D     QV  N  +   E 
Sbjct: 52  KQYADKTKEELEAAAI--PVKVAGRIMLNRGS----FIVLQDSSERLQVYVNRKTLPEET 105

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
              +++  +  I G      AE + A    G + +    + +L+ +   PLP        
Sbjct: 106 LAEIKTWDLGDIIG------AEGVLARSGKGDLYVDMTSVRLLTKSLR-PLPDKHHGLTD 158

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
              R++ R++DL  +   ++  + R+++I  +R  +    F+E  TP+L T      A+ 
Sbjct: 159 TEQRYRQRYVDLMVNEETRHTFRVRSQVIAHIRRFLSERGFLEVETPMLQTIPGGAAAKP 218

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F         + + L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  L+ 
Sbjct: 219 FETHHNALDMAMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP-EFTMLEF 276

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D ++  E + R + +       V               YG        P + 
Sbjct: 277 YQAYADYEDNMDLTEELFRELAQAVLGSTDVP--------------YGDKVFHFGEPFVR 322

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V +  +    ++      +N   +  AI  K G             A+  G  GL  +
Sbjct: 323 LSVYDSILKYNPQI--TPADLNDVEKARAIARKAG-------------AKVLGHEGLGKL 367

Query: 360 FWRLDES 366
              + E 
Sbjct: 368 QVMIFEE 374



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K++  H     P       + ND       +++L   G EIA+     + +E   + F
Sbjct: 377 EHKLEQPHFITRYPFEVSPLARRNDEDPSVTDRFELFIGGREIANAYSELNDAEDQAERF 436

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 K+  ++           A + GMPP  G   GIDR+VMLL  + ++R+V LFP 
Sbjct: 437 MLQVKEKDAGDDEAMHYDADFINALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPH 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|206901450|ref|YP_002250648.1| asparaginyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206740553|gb|ACI19611.1| asparaginyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 433

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/327 (20%), Positives = 124/327 (37%), Gaps = 33/327 (10%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
              D+     G  + + GW+   R  G I+FL IRD  G  Q VA  D+   +  +S+  
Sbjct: 7   YIEDIPKIQEG-EIEVRGWLFNKRSSGKIVFLIIRDGTGYIQGVATLDNFTQDQLESLEK 65

Query: 68  E---WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
                 L + G +              G  EL  + + ++S +EE P+    ++++    
Sbjct: 66  IPIESSLIVVGDLKKEPR-------APGGYELLLKSVNVVSYSEEYPIQ---KKDHSIDF 115

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
             + R L +R    +  +  R+ ++ ++R  +  + F+    PILT S+ EG        
Sbjct: 116 LLERRHLWIRSRKQNAILRIRSEVVKAIRDFLDEKGFVLIDAPILTPSACEGTTTLFELD 175

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             + G  Y L Q+ Q Y +      F + +   P FR E  ++ R   EF+ ++ EM+F 
Sbjct: 176 YFDLGKAY-LSQSGQLYMEAA-CMAFGKVYCFGPAFRAEKSKTRRHLTEFWMVEPEMAFW 233

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRYGTD 289
           +  D +   E ++  + +                          F RI Y +AI     +
Sbjct: 234 DWQDNMRLQEELVSYIVQRVLEKRKRELEILERDTKPLEKVVPPFPRITYREAIEILKRN 293

Query: 290 KPDLRNPIIM--HNVTEHFVHSEFRVF 314
             ++           T      +  VF
Sbjct: 294 GQNVEYGDDFGGDEETIISSQFDRPVF 320



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 43/117 (36%), Gaps = 14/117 (11%)

Query: 451 KIDFAHNPFTMPQG--GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
                  PF M       E +  NDLL+ + +         EI  G  R H  +++ +  
Sbjct: 323 HYPAKIKPFYMQPDPENPEEVLNNDLLAPEGYG--------EIIGGSQRIHDLKLLEKKL 374

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
               + K      F       + G  PH G   GI+R V  + G K+VRE   FP  
Sbjct: 375 EEYNLPK----EAFEWYLDLRRYGSVPHSGFGLGIERTVAWICGLKHVREAIPFPRM 427


>gi|229158164|ref|ZP_04286232.1| Asparaginyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228625326|gb|EEK82085.1| Asparaginyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 463

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/353 (18%), Positives = 122/353 (34%), Gaps = 51/353 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCID 74
            G  V++SGW+  +R      F+++ D      V    + +   F+    +     + ++
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSSVKVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V++               E+ A KI+I  +++    P+  +R   E +R     L  R
Sbjct: 77  GKVIATPG-------AKQPFEIKADKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+   TPI+T S  EGA +    +  +       
Sbjct: 128 TNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVPKG 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E  D++N  E++L+   +           F                      R
Sbjct: 248 EPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           I Y +AI+       D + P+   +   TEH  +    +F + + V    +  
Sbjct: 308 ITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI 360



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M          +D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMR-------LNDDGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G+     E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMK----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|301300314|ref|ZP_07206521.1| lysine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852087|gb|EFK79764.1| lysine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 495

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 65/351 (18%), Positives = 132/351 (37%), Gaps = 27/351 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           ++   +  +L   D+     ++G +   R  G + F D++D  G  Q+    D    E+ 
Sbjct: 45  KFEDKTKEEL--IDLDVKATIAGRMVAKRGKGKVGFADLQDKTGRMQLYIRKDEVGEEMY 102

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              +   +    G  +  + + I  ++  G++ +   K+  LS A   PLP         
Sbjct: 103 HIFKRSDL----GDFLGVTGDVIKTDM--GELTIKVTKLTFLSKALR-PLPDKFHGLQNV 155

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDF 180
              ++ R+LDL  +    N    R++I+ ++R  + +  F+E  TP+L   +    AR F
Sbjct: 156 EQIYRQRYLDLITNRESYNRFVNRSKIVIAVRNYLDSNGFLEVETPVLHNQAGGAAARPF 215

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  A + + + L+  G +R ++I   FR+E   +   P EF  L+  
Sbjct: 216 ITHHNALDIQLY-LRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTKHNP-EFTMLETY 273

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ +  D+++  E + +   +                 D  I   GTD  D        
Sbjct: 274 AAYFDFKDVMDETEGIFKAAAKVV-------------TSDGKINYQGTDV-DFNKEFKRV 319

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           ++ +         F K +S+    ++                 +NE+    
Sbjct: 320 HMVDLIKEKTGVDFWKEMSLEEARKIADEHKVHYEPYWQVGHIINEFFEQF 370



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 78/224 (34%), Gaps = 25/224 (11%)

Query: 357 AYIFWRLDESGNVAGMGPVAK--------HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
           AY  ++             AK        +    + +  +    +   D      G    
Sbjct: 275 AYFDFKDVMDETEGIFKAAAKVVTSDGKINYQGTDVDFNKEFKRVHMVDLIKEKTGVDFW 334

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCW-----IMDFPFYEWNEEEKKIDFAHNPFTMPQ 463
                 +AR  IA E  +     +E  W     I +F  +E   E+  +D         +
Sbjct: 335 KEMSLEEAR-KIADEHKV----HYEPYWQVGHIINEF--FEQFCEDTIVDPTFVYGHPVE 387

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
               + K  D       +++L   G E A+     +      Q F      ++   +   
Sbjct: 388 ISPLAKKNAD-DPRFTDRFELFILGNEYANAFTELNDPIDQRQRFEAQVAERQAGNDEAE 446

Query: 524 G----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G       A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 447 GIDEDYIEAMEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 490


>gi|237726471|ref|ZP_04556952.1| lysyl-tRNA synthetase [Bacteroides sp. D4]
 gi|229434997|gb|EEO45074.1| lysyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
          Length = 576

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 117/276 (42%), Gaps = 10/276 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +    +    V  +G +   R  G   F++++D  G  QV    D  C + 
Sbjct: 36  NAFSTDIKAEFKDDEEPRKVSAAGRMMSRRVMGKASFIELQDSKGRIQVYITRDDICPDE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + A+K+ +LS + +    V  +    
Sbjct: 96  NKELYNTVFKRLLDLGDFVGIEGFVFRTQMGEISIHAKKLTVLSKSIKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R++DL  +   K   +KR+++ +SMR    ++ ++E  TPIL + + 
Sbjct: 156 YDKFEDPELRYRQRYVDLAVNEEVKDIFIKRSKVFSSMREYFNSKGYMEVETPILQSIAG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y +  A + Y + L+  GF+  ++I   FR+E       P E
Sbjct: 216 GAAARPFITHHNALDMPLY-MRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
           F  +++ +++ + + ++   E ++  +  + +    
Sbjct: 274 FTCMEIYVAYKDYNWMMEFTEKMIEKICLDVNGTTQ 309



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 17/150 (11%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+ NG E+ +     +     L+ F
Sbjct: 378 EGTYIQPTFITDYPKEMSPLTKIHRSNPDLTERFELMVNGKELCNAYSELNDPIDQLERF 437

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  E  ++          RA + GMPP  G+  G+DR+ ML+ G   ++EV  FP 
Sbjct: 438 EEQMRLSEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFPQ 497

Query: 565 SQNFCDLLMGSPSTVSVE----QLRELGLR 590
            +         P  V+ +    +  ELG+ 
Sbjct: 498 MR---------PEKVTPKDTPAKFMELGIS 518


>gi|329569957|gb|EGG51712.1| asparagine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 450

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 76/352 (21%), Positives = 133/352 (37%), Gaps = 45/352 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEI 61
               VG  V++  W+   R  G I FL +RD       VV  P+          +  F+ 
Sbjct: 15  SNKHVGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQE 74

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K +  E  + + G++   S             E+    +E++  +E+ P+     +E+ 
Sbjct: 75  IKHLSQETAVMVTGVIKEDSRSKF-------GYEMDITDLEVVGASEDYPITP---KEHG 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +R L LR    H  ++ R+ II +       + FI+  +PILT S+PEG  +  
Sbjct: 125 TDFLMDHRHLWLRSSKQHAIMLVRSEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELF 184

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 Q +F  L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 185 ETDYFGQPAF--LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRR 285
           ++   ++ L+  E  ++ + +                           F RI YDDAI  
Sbjct: 242 AYTTHEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIEL 301

Query: 286 YG-----TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
                   D   +       +  E F+ + + V + IL+     + + +   
Sbjct: 302 LQKEEANNDYDHIEWGEDFGSPHETFISNYYGVPTFILNYPKAIKAFYMKPH 353



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF-------QYDLVC----- 486
           D+   EW E+       H  F     G+ +   N   +IKAF       + D+V      
Sbjct: 310 DYDHIEWGEDFG---SPHETFISNYYGVPTFILNYPKAIKAFYMKPHPTREDVVICADLI 366

Query: 487 ---NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
                 EI  G  R    + + +  +  G+S    E  +       + G  PH G   G+
Sbjct: 367 APEGYGEIIGGSERATDYDYLKEKVAEFGLS----EEEYSWYLDLRKYGSVPHSGFGLGL 422

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R V  + G +++RE   FP  
Sbjct: 423 ERAVTFITGNEHIREAIPFPRM 444


>gi|218887177|ref|YP_002436498.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218758131|gb|ACL09030.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 471

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 68/360 (18%), Positives = 118/360 (32%), Gaps = 52/360 (14%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L      + +R+ GWV   R   G  FL+I D   +   Q + +     F + 
Sbjct: 10  RTPVADALTAQAPVAHIRICGWVRTRRDAKGFSFLEINDGSCLANIQCIVDEALPDFAVI 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K V +   + + G ++    +         + E+ A  + +L  A+    P+  +R   E
Sbjct: 70  KDVNTGAAVDVRGELVESPGKG-------QKWEVRAAALTLLGGADAEAYPLQKKRHSDE 122

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R     L  R +        R+    ++        F    TPILT S  EGA +   
Sbjct: 123 FLR-TIAHLRARTNKFGAAFRIRSEAAYAIHEFFRERGFFHVHTPILTGSDCEGAGEMFR 181

Query: 183 PS----------------RVNQGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            +                   +  F+          Q +   +A G  + +   P FR E
Sbjct: 182 VTTLPVSGASGTPVPPSGNHFEADFFGKECNLTVSGQLEAEALAMGLGKVYTFGPTFRAE 241

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------ 271
           +  + R   EF+ ++ E +F + +D +   E + R V                       
Sbjct: 242 NSNTARHAAEFWMIEPEFAFADLNDDMELAEAMTRTVVTRVLERCAADIELFDRFVDNGL 301

Query: 272 ---------NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
                      F R+ Y +AI            P+   +   TEH  +     F K + V
Sbjct: 302 IERLRTIAGQPFARVSYREAIELLKACGKKFDYPVSFGLDLQTEHERYLAEEHFGKPVIV 361



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 4/83 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    E+  G  R    +V+      +G +               + G  PH G   G 
Sbjct: 388 LVPRIGELIGGSQREERLDVLEARIREIGQNPGDYW----WYLDLRRFGSVPHAGFGLGF 443

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           +R++MLL G  N+R+V  FP + 
Sbjct: 444 ERLLMLLTGIANIRDVVPFPRTP 466


>gi|75909835|ref|YP_324131.1| asparaginyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|75703560|gb|ABA23236.1| Asparaginyl-tRNA synthetase, class IIb [Anabaena variabilis ATCC
           29413]
          Length = 463

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 71/355 (20%), Positives = 132/355 (37%), Gaps = 51/355 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY--GITQVVANPDSACFEIA-KSVRSE 68
           L        + + GWV   R   G  F+++ D    G  QVV N D   + +  K + + 
Sbjct: 10  LRSGQPDESLVVQGWVRTKRELKGFAFIEVNDGSSLGNLQVVINQDLPDYAVIVKQLNTG 69

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + ++G++++   +         +IEL A+ +++   A+    P+  +R   E +R   
Sbjct: 70  ASVEVNGVLVASQGKG-------QRIELKAEAVKVYGEADPETYPLQKKRHSFEFLR-TI 121

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R ++       R     ++        F+   TPI+TAS  EGA +    + ++ 
Sbjct: 122 GHLRSRTNSFGAVFRVRNACSAAIHQFFQERGFLWVHTPIITASDCEGAGELFSVTSLDL 181

Query: 189 G--------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+A P       Q +  +MA  F   +   P FR E+  + R  
Sbjct: 182 KQIPRTENQGIDYSQDFFAKPTYLTVSGQLEAEVMAMAFSNVYTFGPTFRAENSNTSRHL 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS-------------------- 271
            EF+ ++ EM+F + +  ++  E  L+ +F                              
Sbjct: 242 AEFWMVEPEMAFCDLEGDMDLAEAFLKHIFNHVLEKCPEDMEFFNQRIDNTVLATAENII 301

Query: 272 -NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
            N F R+ Y DAI+           P+   +   +EH  +   ++F K + V   
Sbjct: 302 NNQFERLTYTDAIKLLEKADVKFEYPVSWGLDLQSEHERYLAEQLFKKPVIVTDY 356



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 48/136 (35%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEI 491
           +   + D+P                 F M     E +++  D+L+ K           EI
Sbjct: 349 KPVIVTDYP------------AQIKAFYMRLSDDEKTVRAMDVLAPKIG---------EI 387

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    +V+ +     G+  E +           + G  PH G   G +R+V  + 
Sbjct: 388 IGGSQREERLDVLERRILAQGMQPEDLW----WYLDLRRYGTVPHAGFGLGFERLVQFIT 443

Query: 552 GAKNVREVSLFPMSQN 567
           G  N+R+V  FP +  
Sbjct: 444 GMGNIRDVIPFPRTPQ 459


>gi|332978485|gb|EGK15197.1| lysine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 508

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 68/347 (19%), Positives = 130/347 (37%), Gaps = 40/347 (11%)

Query: 2   HRYRTHSCGDLGVSDVG---------------SFVRLSGWVHRVRPHGGIIFLDIRDHYG 46
              RT    DL     G               + V ++G V   R      F+ I+D  G
Sbjct: 41  KFKRTDYAEDLQKQFEGISKEEIEEKAANGDKTQVNVAGRVMLNRG----AFIVIQDMTG 96

Query: 47  ITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV 106
             Q+         E    ++S  +  I G+               G + +  ++I +L+ 
Sbjct: 97  RIQLYVARKELTEETLALIKSLDLGDIVGV------SGYIGRSGKGDLYVHIEEITLLTK 150

Query: 107 AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECS 165
           +   P+P           R++ R LDL  +   +N    R+++I+ +R  M+ E F+E  
Sbjct: 151 SLR-PMPNKFHGLADTEARYRNRHLDLMTNEDSRNTFLIRSKVISGIRKFMLNERFMEVE 209

Query: 166 TPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
           TP++        AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E 
Sbjct: 210 TPMMHPIPGGAVARPFITHHNALDMPLY-LRIAPELYLKRLVVGGFERVFEINRSFRNEG 268

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FL 275
             +   P EF  ++   ++ +  D+++  E +   +  +      ++           F 
Sbjct: 269 VSTRHNP-EFTMIEFYQAYADYKDLMDLTERLFNELATDILGTTELTYQDENISFKAPFA 327

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNP 322
           R+   DAI +Y  D  D+        + ++  +   +   +   +  
Sbjct: 328 RLSMKDAIAQYA-DNFDMSKIDDRDYLADYAQNVLKQQVKEGFGIGK 373



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 5/128 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E    E K+         P       + ND       +++L   G EIA+G    +   
Sbjct: 379 FE-ETAEHKLRQPTFITEYPAETSPLARRNDENPEITDRFELFIGGREIANGFSELNDPA 437

Query: 503 VMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F N    K+  ++           A   G+PP  G   GIDR+VML   A ++R+
Sbjct: 438 DQAERFHNQVAEKDAGDDEAMHFDADYIEALSYGLPPTAGEGIGIDRLVMLFTDAASIRD 497

Query: 559 VSLFPMSQ 566
           V LFP  +
Sbjct: 498 VILFPHMR 505


>gi|124026937|ref|YP_001012257.1| aspartyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|123977631|gb|ABM79912.1| Aspartyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 442

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 12/266 (4%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFE 60
           R R +    L    +G+   ++GWV  VR HGG++F+ +RD  G  Q+V   +     +E
Sbjct: 6   RERVYIRDLLEKGVIGNEYTVAGWVDTVRVHGGLVFVVVRDRTGKMQLVVKRNISREAWE 65

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +  E V+   G ++        +    G  EL   ++E+L+ A+ LP+ ++   + 
Sbjct: 66  HARKLAPESVVAARGRLVE-------SKAALGGRELQVYELEVLNKADPLPIDIYAPDKT 118

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
             + R  +RFLDLR       +     +  + R   +   FIE  TP +  ++ EG  + 
Sbjct: 119 TLAKRLDWRFLDLRNPRNQLIMRIAAEVARAAREWFVENGFIEIFTPKIVGAATEGGAEV 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 ++ +F A  Q+PQ YKQ+ + +G ++ F+I P FR E   + R   E+  +D+E
Sbjct: 179 FSIVYFDKPAFLA--QSPQLYKQMGVIAGLEKVFEIGPAFRAEPHHTTRHLTEYTSIDLE 236

Query: 241 MSFVE-QDDILNTMENVLRGVFEEFS 265
           M F++  +D+++ +E V+R V     
Sbjct: 237 MGFIDSYEDVMDIVEAVIRHVISSVL 262



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 26/156 (16%)

Query: 415 DARNHIAQELGIINCNCFE--FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
           D  +   ++LG I    +     ++ ++P+            A  PF   +   E     
Sbjct: 308 DLSSEAERKLGEIVEREYGSYLVFVTEYPW------------AVRPFYTMRKSDEP---- 351

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                  + +DL+  G EIA+GG R H  +V+++     G++       F      F+ G
Sbjct: 352 ----DWTYSFDLLMRGLEIATGGQREHRYDVLVKQLEEKGLNPR----NFEWYLAMFRYG 403

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            PPHGG   G++R+VM LLG  N+RE  + P     
Sbjct: 404 APPHGGAGIGLERVVMQLLGLGNIREARMLPRDPER 439


>gi|262065895|ref|ZP_06025507.1| lysine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291380375|gb|EFE87893.1| lysine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 493

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 64/330 (19%), Positives = 129/330 (39%), Gaps = 18/330 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + +G +  +R  G + F  I D  G  QV    D         +     +   G ++   
Sbjct: 57  KTAGRIMSLRGKGKVYFAHIEDQSGKIQVYIKKDELGEAEFDHIVKMLNV---GDIIGVE 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHK 140
            E    +  T ++ L  + I +L+      LP          IR++ R++DL  +  +  
Sbjct: 114 GELFITH--TEELTLRVKSISLLTK-NVRSLPEKYHGLTDVEIRYRKRYVDLIMNPDVRS 170

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
             +KRT+II ++R  +    F+E  TP++       A    V           L  AP+ 
Sbjct: 171 TFIKRTQIIKAVRKYLDDRGFLEVETPLMHPILGGAAAKPFVTHHNALNLDLFLRIAPEL 230

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF+R +++   FR+E   +   P EF  +++  S    +D+++  E ++  V
Sbjct: 231 YLKKLIVGGFERVYELGRNFRNEGISTRHNP-EFTMIELYQSHANFNDMMDLCEGIISSV 289

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT--EHFVHSEFRVFSKIL 318
            +E +    +  + +++   +  R +  D         + +VT  + +    F    K+ 
Sbjct: 290 CQEVNGTTDIEYDGVQLSLKNFQRVHMVDM--------IKDVTGVDFWQEMTFEEAKKLA 341

Query: 319 SVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
             +       + + G   N  F  +  E  
Sbjct: 342 KEHHVEVADHMDSVGHIINEFFEQKCEERV 371



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE ++      +  P       K N+       +++L  N  E A+     +  
Sbjct: 362 FFEQKCEE-RVVQPTFVYGHPVEISPLAKRNEKNPNFTDRFELFINKREYANAFTELNDP 420

Query: 502 EVM-----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                    Q    +  ++E           A + G+PP GG+  GIDR+VMLL GA ++
Sbjct: 421 ADQRGRFEAQVEEAMRGNEEATPEIDESFVEALEYGLPPTGGMGIGIDRLVMLLTGAPSI 480

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 481 RDVILFPQMK 490


>gi|229011492|ref|ZP_04168680.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228749783|gb|EEL99620.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 437

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 10  MKRSLTREC----TEHGGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 64

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ I G ++      +        +E+ A+++++L+ AE LP  +  ++  
Sbjct: 65  ---KVDVESVVQIIGEIVETPKTEL-------GVEVLAREVKVLNGAEPLPFEINKKKLQ 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 115 VGLDQLLNERVLSLRHERIAAVFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 175 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 232

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 233 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 271



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +T+P     ++  
Sbjct: 302 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTIPNKENPTITD 350

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  +++L +F   G+       +F      F+ 
Sbjct: 351 S---------FDLLYKGLEITSGAQRIHNYDMLLASFKEKGLHP----EKFQSYLNTFRY 397

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 398 GCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 431


>gi|212703997|ref|ZP_03312125.1| hypothetical protein DESPIG_02050 [Desulfovibrio piger ATCC 29098]
 gi|212672590|gb|EEB33073.1| hypothetical protein DESPIG_02050 [Desulfovibrio piger ATCC 29098]
          Length = 454

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 70/350 (20%), Positives = 126/350 (36%), Gaps = 42/350 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIA 62
           RT     L        + + GW+   R      F++I D   +T +    D  +A  E  
Sbjct: 3   RTLIVNALASEAPQRQITVCGWIRTRRDAKDFSFVEINDGSCLTNMQCIVDAGTAAHEGL 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
               +   + + G +++   +         + E+ A+ I +  +A+    P+  +R   E
Sbjct: 63  GDANTGASVAVTGELVASPGKG-------QKWEVRAESIRVFGLADPESFPLQKKRHSDE 115

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R     L +R +        R+    ++     +++F    TPILT S  EGA +   
Sbjct: 116 FLRG-IAHLRMRTNKYGAAFRIRSEAARAVHDYFHSQHFSWVHTPILTGSDCEGAGEMFR 174

Query: 183 PSRVNQG------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            + +  G       F+   A      Q +   +A G  R +   P FR E+  + R   E
Sbjct: 175 VTALPAGEKDLSKDFFGRQANLTVSGQLEAEALALGLGRVYTFGPTFRAENSNTPRHAAE 234

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSN 272
           F+ ++ EM+F E +DI+   E + R V +                            ++ 
Sbjct: 235 FWMIEPEMAFAELEDIMELGEGLTRHVVDHALTRCESDLKLFDNFVDKGLIDRLKGMLAQ 294

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSV 320
            F R+ Y DAI        +   P+       TEH        F + + V
Sbjct: 295 PFARVSYRDAIHILEDSGKEFTFPVAFGVDLQTEHERFLAEEHFRRPVIV 344



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 4/98 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++GND     A    LV    E+  G  R    + +L   + +G         +      
Sbjct: 356 MRGNDDGETVAAMDVLVPRIGELIGGSQREERLDKLLARIAEMGQKP----EDYWWYLDL 411

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + G  PH G   G +R++M+L G  N+R+V  FP + 
Sbjct: 412 RRFGSVPHAGFGMGFERLLMMLTGITNIRDVIPFPRTP 449


>gi|107103214|ref|ZP_01367132.1| hypothetical protein PaerPA_01004283 [Pseudomonas aeruginosa PACS2]
 gi|218890023|ref|YP_002438887.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|254236610|ref|ZP_04929933.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|254242395|ref|ZP_04935717.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|226736753|sp|B7V0Z5|SYK_PSEA8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|126168541|gb|EAZ54052.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|126195773|gb|EAZ59836.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|218770246|emb|CAW26011.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 501

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 140/367 (38%), Gaps = 46/367 (12%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   +  +L  + +   V+++G +   R      F+ ++D     QV  N  +   E 
Sbjct: 52  KQYADKTKEELEAAAI--PVKVAGRIMLNRGS----FIVLQDSSERLQVYVNRKTLPEET 105

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
              +++  +  I G      AE + A    G + +    + +L+ +   PLP        
Sbjct: 106 LAEIKTWDLGDIIG------AEGVLARSGKGDLYVDMTSVRLLTKSLR-PLPDKHHGLTD 158

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
              R++ R++DL  +   ++  + R+++I  +R  +    F+E  TP+L T      A+ 
Sbjct: 159 TEQRYRQRYVDLMVNEETRHTFRVRSQVIAHIRRFLSERGFLEVETPMLQTIPGGAAAKP 218

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F         + + L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  L+ 
Sbjct: 219 FETHHNALDMAMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP-EFTMLEF 276

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D ++  E + R + +       V               YG        P + 
Sbjct: 277 YQAYADYEDNMDLTEELFRELAQAVLGTTDVP--------------YGDKVFHFGEPFVR 322

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V +  +     +      +N   +  AI  K G             A+  G  GL  +
Sbjct: 323 LSVFDSILKYNPEI--TAADLNDVEKARAIAKKAG-------------AKVLGHEGLGKL 367

Query: 360 FWRLDES 366
              + E 
Sbjct: 368 QVMIFEE 374



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K++  H     P       + ND       +++L   G EIA+     + +E   + F
Sbjct: 377 EHKLEQPHFITRYPFEVSPLARRNDEDPSVTDRFELFIGGREIANAYSELNDAEDQAERF 436

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 K+  ++           A + GMPP  G   GIDR+VMLL  + ++R+V LFP 
Sbjct: 437 MLQVKEKDAGDDEAMHYDADFINALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPH 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|153809093|ref|ZP_01961761.1| hypothetical protein BACCAC_03403 [Bacteroides caccae ATCC 43185]
 gi|149128426|gb|EDM19645.1| hypothetical protein BACCAC_03403 [Bacteroides caccae ATCC 43185]
          Length = 467

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 58/293 (19%), Positives = 109/293 (37%), Gaps = 25/293 (8%)

Query: 1   MHRY-RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L  +D+G+ V + GWV   R    + F+ + D   I  +    D A F
Sbjct: 1   MEKIGRTKIVDLLKRTDIGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNLQVVVDLANF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +          L   G  +S + E + +     ++E+ A++IE+L   +        ++ 
Sbjct: 61  DE-----EMLKLITTGACISVNGEMVESVGSGQKVEVQAREIEVLGTCDNTYPLQ--KKG 113

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           +      +   L  R +T       R  +  ++        F    TPI+TAS  EGA  
Sbjct: 114 HSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHDRGFFYFHTPIITASDCEGAGQ 173

Query: 180 FLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRD 222
               + +N                 F+    +     Q +  L A+     +   P FR 
Sbjct: 174 MFQVTTMNLYDLKKDERGSISYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRA 233

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           E+  + R   EF+ ++ E++F +  D ++  E  ++   +   +       FL
Sbjct: 234 ENSNTPRHLAEFWMIEPEVAFNDIADNMDLAEEFIKYCVKWALDNCADDVKFL 286



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 70/226 (30%), Gaps = 33/226 (14%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCF-FIAGDPLKFCSFAA 414
           LA  F +      +       K LN +  + +  RL     D+       D +K    A 
Sbjct: 263 LAEEFIKYCVKWALDNCADDVKFLNDMFDKGLIERLQGVLKDNFVRLPYTDGIKILEEAV 322

Query: 415 DARNHIAQELGIINCNCFEF--CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK-- 470
                          + FEF   W +D        E ++     +            +  
Sbjct: 323 A------------KGHKFEFPVYWGVD-----LASEHERYLVEEHFKCPVILTDYPKEIK 365

Query: 471 ------GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   D  +++A    L     EI  G  R    + ++     + I  + +      
Sbjct: 366 AFYMKQNEDGKTVRAMDV-LFPKIGEIIGGSERESDYDKLMTRIEEMHIPMKDMW----W 420

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                + G  PH G   G +R+++ + G  N+R+V  FP +    D
Sbjct: 421 YLDTRKFGTCPHSGFGLGFERLLLFVTGMSNIRDVIPFPRTPRNAD 466


>gi|126651186|ref|ZP_01723396.1| asparaginyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126592024|gb|EAZ86090.1| asparaginyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 431

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 80/322 (24%), Positives = 122/322 (37%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
              +G  V++  W+   R  G I FL +RD  G  Q V   +      F  AK +  E  
Sbjct: 10  PQHIGETVKMGAWLANKRSSGKIAFLQLRDGSGFVQGVVVKEEVGEEIFATAKGLTQETS 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I G V +    +          EL+   IE+L    + P+     +E+        R 
Sbjct: 70  MYITGEVKADERSSFGC-------ELAVTGIEVLHTTTDFPITP---KEHGPEFLMDNRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II +         F +   PILT SSPEG  +       ++ +
Sbjct: 120 LWLRSRKQHAIMKVRNEIIRATYEFFNNNGFTKMDPPILTGSSPEGTSELFHTKYFDEDA 179

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L
Sbjct: 180 F--LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEFEENL 236

Query: 251 NTMENVLRGVFEEF---------------SNGNTVSNNFLRICYDDAI---RRYGTDKPD 292
              E  +  + +                 S    +   F RI YDDAI      G D  +
Sbjct: 237 EVQEQYVTHIVQSVLANCKLELERLDRDTSKLENIKAPFPRISYDDAIKLLHEQGFDDIE 296

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
             +     + T      +  VF
Sbjct: 297 WGDDFGAPHETAIANSFDKPVF 318



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 57/189 (30%), Gaps = 21/189 (11%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
            L +   +    +L+            D +K              + G  +       + 
Sbjct: 255 KLELERLDRDTSKLENIKAPFPRISYDDAIKLLHEQGFDDIEWGDDFGAPHETAIANSF- 313

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGG 495
            D P +              PF M         +   DL++ + +         EI  G 
Sbjct: 314 -DKPVF-----ITCYPVGIKPFYMQPHPDRDDVVLCADLIAPEGYG--------EIIGGS 359

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            R H  +++        +S     + +       + G  PH G   G++R V  + G ++
Sbjct: 360 ERIHDYDLLKSRLEEHNLSL----DAYAWYLELRKHGSVPHSGFGLGLERTVAWISGTEH 415

Query: 556 VREVSLFPM 564
           +RE   FP 
Sbjct: 416 IRETIPFPR 424


>gi|323465812|gb|ADX69499.1| Lysyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 516

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 62/301 (20%), Positives = 117/301 (38%), Gaps = 18/301 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +++G +   R  G + F D+ D  G  Q+    D    +  K  +   +    G  +   
Sbjct: 62  KIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDI----GDFLGID 117

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E +     TG++ + A  +  LS A   PLP            ++ R+LDL  +     
Sbjct: 118 GEVM--KTDTGELTIRATHVTFLSKALR-PLPDKYHGLKDVEAIYRQRYLDLITNRDSYM 174

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
               RT+II ++R  +  +NF+E  TP+L        AR F+          Y +  A +
Sbjct: 175 RFVHRTQIIQAIRDYLNKQNFLEVETPVLHNIPGGAEARPFITHHNALDIDLY-MRIALE 233

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  E ++R 
Sbjct: 234 LPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDFHDVMDEAEGIIRA 292

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPIIMHNVTEHFVHSEFR 312
             +  S+   ++     I      RR             D   P+ +   T+     +  
Sbjct: 293 AAKVVSDDGKITYQGQDIDLGKPFRRIHMVDLIKEKTGVDFWKPMTLEEATKIAEDHDIH 352

Query: 313 V 313
           V
Sbjct: 353 V 353



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 6/153 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IA++  I     ++   I++  F+E   EE  +D         +    + K  D    
Sbjct: 343 TKIAEDHDIHVEKFWKVGHIINA-FFEKYCEETIVDPTFVYGHPVEISPLAKKNAD-DPR 400

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGM 533
              ++++   G E  +     +  +     F      +E   +          RA + GM
Sbjct: 401 FTDRFEIYIMGEEYGNAFSELNDPDDQRARFEAQMEEREAGNDEADMIDEDYLRAMEYGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 461 PPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 493


>gi|315640659|ref|ZP_07895764.1| asparagine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315483598|gb|EFU74089.1| asparagine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 432

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 76/323 (23%), Positives = 128/323 (39%), Gaps = 35/323 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
            + VG  V++  WV   R  G I FL +RD         V        F++AKS+  E  
Sbjct: 10  KNHVGETVKIGAWVANKRSSGKIAFLQLRDGTAYFQGVVVKNEVSEEVFQLAKSLTQETS 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +   S             EL    +E++  +++ P+     +E+       +R 
Sbjct: 70  VIVTGEIREDSRSKF-------GYELGISNVEVIGESQDYPITP---KEHGTDFLMDHRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  +I +        +F++   PILT S+PEG  D    +  +Q +
Sbjct: 120 LWLRSSRQHAIMQIRNELIRATYEFFNKHHFVKIDPPILTGSAPEGTTDLFETNYFDQKA 179

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L
Sbjct: 180 Y--LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESL 236

Query: 251 NTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIR---RYGTDKP 291
              E  +  + +   +                    +  F RI YDDAI    + G D  
Sbjct: 237 EVQEQYVAFLVQNVLDNCDYALDVLGRDRAVLEKYTNLPFPRISYDDAIDLLIKNGFDDI 296

Query: 292 DLRNPIIMHNVTEHFVHSEFRVF 314
              +     + T      +  VF
Sbjct: 297 QWGDDFGSPHETFIANSFDRPVF 319



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 43/126 (34%), Gaps = 15/126 (11%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D P +  N        A  PF M               I    Y       EI  G  R 
Sbjct: 315 DRPVFILN-----YPKAIKPFYMKPHPTREDVVICADLIAPEGY------GEIIGGSERA 363

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              E +L+   N G+S    E  +       + G  PH G   G++R V  + G ++VRE
Sbjct: 364 TDYEFLLEQIKNHGLS----EEEYSWYLDLRRYGSVPHSGFGLGLERTVTWISGIEHVRE 419

Query: 559 VSLFPM 564
              FP 
Sbjct: 420 AIPFPR 425


>gi|254421242|ref|ZP_05034960.1| lysyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196188731|gb|EDX83695.1| lysyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 524

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 59/346 (17%), Positives = 134/346 (38%), Gaps = 23/346 (6%)

Query: 2   HRYR---THSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           + YR   THS   L          ++    V ++G +   R  G + F  ++D  G  Q+
Sbjct: 42  YAYRWEVTHSAAQLQAKFADLATGAEADFEVSVAGRIMARRVFGKLAFFTLQDQTGTIQL 101

Query: 51  VANPDS----ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV 106
                +          ++      L   G ++         +   G++ +  +   +L+ 
Sbjct: 102 YLEKKTIQAAMGEADEQAFNHLKQLTDAGDILGARGTIKRTD--KGELSVKVKHYAMLTK 159

Query: 107 AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECS 165
           +  LPLP         + R++ R++DL  +   ++  + R +I  ++R  +    ++E  
Sbjct: 160 SL-LPLPDKFHGLTDVAKRYRQRYVDLIVNPEVRDTFRKRAKITAAIRRHLDQLGYLEVE 218

Query: 166 TPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
           TP+L +      AR F+          Y L  A + + + ++  GF++ F++   FR+E 
Sbjct: 219 TPVLQSEPGGAEARPFVTYHNTLDMELY-LRIATELHLKRMVVGGFEKVFELGRVFRNEG 277

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
             +   P EF  ++M  ++ + +D+++  E ++  +  E +    V+     I +    +
Sbjct: 278 ISTRHNP-EFTTIEMYQAYGDYEDMMSLTETMIEQIVVEVTGSKGVTYQGEEISFARPWQ 336

Query: 285 RY-GTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
           R    D    +  I    + +     +    + I  V     +  +
Sbjct: 337 RITMHDAVREKTGIDFVQIKDLAKAKQAAKEAGINEVEACESIGHV 382



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)

Query: 480 FQYDLVCNGFEIASGGIRNHMS-------EVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            +++L   G E A+G              E+         +    V+  F     A + G
Sbjct: 423 ERFELFIVGRETANGFSELTDPVDQRERLELQAAKKEAGNLEAHSVDEDF---LTALEYG 479

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP  G+  GIDR+VM+L  A ++R+   FP
Sbjct: 480 MPPTVGMGIGIDRLVMVLTDAASIRDAIAFP 510


>gi|37678853|ref|NP_933462.1| lysyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|39932022|sp|Q7MNP6|SYK_VIBVY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|37197594|dbj|BAC93433.1| lysyl-tRNA synthetase, class II [Vibrio vulnificus YJ016]
          Length = 510

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 67/292 (22%), Positives = 132/292 (45%), Gaps = 25/292 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G V   R      FL I++  G  Q  A+ D     + K ++ ++    
Sbjct: 66  LEALNHVVAIAGRVMAKRGP----FLVIQETSGRIQAYADKD-----VQKVLKDKYQGLD 116

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++        +    G + ++ ++ E+L+ A   PLP        + +R++ R++DL
Sbjct: 117 IGDIIGVKGALHKSG--KGDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 173

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  V R+++++++R  MI++ F+E  TP++        AR F+          
Sbjct: 174 IVNEDSRNAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPM 233

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++
Sbjct: 234 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMD 291

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
             E +L  V  E     ++            + R+   +AI+ Y  D   ++
Sbjct: 292 LTEELLSSVALEVLGSTSMPYGEHTVEFGGTYTRMSMFEAIKHYNPDHAQIQ 343



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 386 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 445

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 446 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504


>gi|256839145|ref|ZP_05544655.1| asparaginyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256740064|gb|EEU53388.1| asparaginyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 468

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 58/291 (19%), Positives = 107/291 (36%), Gaps = 27/291 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61
            RT     L     G+ V + GWV   R    + F+ + D   I  V    + D    E 
Sbjct: 5   KRTKIVDVLKSEAFGTTVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDVDKLGDEF 64

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K + +   + ++G++     +  +       +E+ A +IEI   A+    P+  +    
Sbjct: 65  LKPITTGASISVNGILTQSQGKGQS-------VEIQATEIEIFGTADPATYPLQKKGHSM 117

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +   L  R +T       R  +  ++        F    TPI+TAS  EGA    
Sbjct: 118 EFLR-EIAHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQMF 176

Query: 182 VPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDED 224
             +  N              +  F+    +     Q +  L A+   + +   P FR E+
Sbjct: 177 QVTTKNLYDLKKDENGSIIYEDDFFGKQASLTVSGQLEGELAATALGQIYTFGPTFRAEN 236

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
             + R   EF+ ++ E++F +  D +   E  ++   +   +       FL
Sbjct: 237 SNTPRHLAEFWMIEPEVAFNDIADNMELAEEFIKYCVQWALDNCMEDIKFL 287



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P     +E K        F M Q         D  +++A  
Sbjct: 343 HERFLVEDHFKRPVILTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 383

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R    + ++     +GI  + +           + G  PH G   
Sbjct: 384 V-LFPKIGEIIGGSEREADYDKLMTRIDELGIPMKDMW----WYLDTRRFGTVPHSGFGL 438

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G  N+R+V  FP + N
Sbjct: 439 GFERLLLFVTGMANIRDVIPFPRTPN 464


>gi|206977721|ref|ZP_03238612.1| asparaginyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|222098023|ref|YP_002532080.1| asparaginyl-tRNA synthetase [Bacillus cereus Q1]
 gi|229198708|ref|ZP_04325407.1| Asparaginyl-tRNA synthetase [Bacillus cereus m1293]
 gi|206744022|gb|EDZ55438.1| asparaginyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|221242081|gb|ACM14791.1| asparaginyl-tRNA synthetase [Bacillus cereus Q1]
 gi|228584784|gb|EEK42903.1| Asparaginyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 463

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 64/353 (18%), Positives = 122/353 (34%), Gaps = 51/353 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCID 74
            G  V++SGW+  +R      F+++ D      V    + +   F+    +     + ++
Sbjct: 17  AGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSSVKVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V+                E+ A+KI+I  +++    P+  +R   E +R     L  R
Sbjct: 77  GKVIVTPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+   TPI+T S  EGA +    +  +       
Sbjct: 128 TNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVPKG 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E  D++N  E++L+   +           F                      R
Sbjct: 248 EPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           I Y +AI+       D + P+   +   TEH  +    +F + + V    +  
Sbjct: 308 ITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI 360



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M          +D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMR-------LNDDGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G+     E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMK----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|299141528|ref|ZP_07034664.1| asparagine--tRNA ligase [Prevotella oris C735]
 gi|298576864|gb|EFI48734.1| asparagine--tRNA ligase [Prevotella oris C735]
          Length = 465

 Score =  191 bits (486), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 59/292 (20%), Positives = 120/292 (41%), Gaps = 26/292 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC 58
           M   RT     L  ++ G  + + GWV   R    + F+ + D   I   Q+V +P S  
Sbjct: 1   MKMKRTKVIDALQCTEYGKDINVKGWVRSHRSSKAVDFIALNDGSTINNIQIVVDPASMD 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E  K++ +   + + G ++               +E+ +++IEI  +      P+  + 
Sbjct: 61  AETLKNITTGACISVVGQLVKSQGAGQT-------VEIQSREIEIYGLC-PSDYPMQKKG 112

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E +R KY  L LR +T       R  +  ++        F    TP++TAS  EGA 
Sbjct: 113 QSFEYMR-KYAHLRLRTNTFGAVFRIRHNMAIAVHKYFHDHGFYYFHTPLITASDAEGAG 171

Query: 179 DFLVPSRVN------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDE 223
           +    + ++            +  F+    +     Q +  L A+     +   P FR E
Sbjct: 172 EMFQVTTLDLARTGKDGEVPYERDFFGKKTSLTVSGQLEGELGATALGAIYTFGPTFRAE 231

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +  + R   EF+ ++ E++F+++D++++  E+ ++   +   +       FL
Sbjct: 232 NSNTPRHLAEFWMIEPEVAFLDKDELMDLEEDFIKYCVQWALDNCKDDLEFL 283



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 14/121 (11%)

Query: 451 KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                   F M +    ++++G D+         L     EI  G +R    + ++    
Sbjct: 357 DYPSEIKAFYMKKNPDGKTMQGTDV---------LFPRIGEIIGGSVREESYDKLVNEIK 407

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G+ K    + +       + G  PH G   G +R+++ + G +N+R+V  FP +    
Sbjct: 408 ARGMEK----DCYSWYLDTRKYGSCPHAGFGLGFERLILFVTGMQNIRDVIPFPRTPKSA 463

Query: 570 D 570
           +
Sbjct: 464 E 464


>gi|110003925|emb|CAK98265.1| lysyl-trna synthetase protein [Spiroplasma citri]
          Length = 500

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 64/341 (18%), Positives = 130/341 (38%), Gaps = 30/341 (8%)

Query: 5   RTHSCGDLGV------------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           RTH+   L              S     V+++G +   R  G   F  ++D  GI Q+  
Sbjct: 35  RTHTSKVLNEQFNHLSKEILATSSDNMTVKIAGRIKTFREVGKASFATVQDQNGIFQIYV 94

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
             D    E  +   +  +  I G+        I     TG++ +  ++  +L+ A    L
Sbjct: 95  RNDEVGDEKYQEFINFDLGDIIGV------TGIMMKTNTGELTVRVKEFVLLAKALR-AL 147

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA 171
           P           +++ R++DL   T  K   +KR++II  MR    ++ ++E  TP+L  
Sbjct: 148 PDKYRGMTDIEEKYRRRYVDLITSTETKDIFIKRSKIIALMRDFFNSKGYLEVETPVLQP 207

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 A+ F+         FY L  A +   + L+  GF+  +++   FR+E   +   
Sbjct: 208 IHGGAAAKPFVTHHNTLDMDFY-LRVATELPLKRLIVGGFEGVYEMGRLFRNEGMDTRHN 266

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  +++ +++ + + ++   E+ +  + +   N N    + + I +    +R+    
Sbjct: 267 P-EFTTVEIYVAYQDMNFMMQLTEDTICYIAKNILNKNETEYDGVMISFQQPWKRWHMVD 325

Query: 291 P-------DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
                   D   P+      +     +  +     SV    
Sbjct: 326 AIKELVGIDFWKPMTFAEAKKISKEKKVPIEKFHTSVGHII 366



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 4/124 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+      +  P       K N        +++L   G E A+     +        F
Sbjct: 375 EDKLIQPTFIYGHPVEVSPLAKTNAEDPRFTDRFELFIKGREYANAYSELNNPVEQYDRF 434

Query: 509 ----SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
               +      +  +        A + GMPP GG+  GIDR+VMLL G  ++++V LFP 
Sbjct: 435 VSQLAERDNGNDEAQELDIDFIEALEYGMPPTGGLGIGIDRLVMLLTGQDSIKDVLLFPH 494

Query: 565 SQNF 568
            ++ 
Sbjct: 495 MRSR 498


>gi|167752417|ref|ZP_02424544.1| hypothetical protein ALIPUT_00661 [Alistipes putredinis DSM 17216]
 gi|167660658|gb|EDS04788.1| hypothetical protein ALIPUT_00661 [Alistipes putredinis DSM 17216]
          Length = 574

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 64/283 (22%), Positives = 115/283 (40%), Gaps = 19/283 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             +R++G +   R  G   F +++DH G  QV    D  C E   ++ +     +  +  
Sbjct: 53  QGIRIAGRIMSRRIMGSASFFELQDHTGRIQVYIRRDDICPEGDPTLYNTVFKKLLDIGD 112

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------YPESIRFKYRFLD 132
               E       TG++ +  QK+ +LS +      V  +            IR++ R++D
Sbjct: 113 IVGVEGFAFRTNTGELSVHCQKLTLLSKSLRPLPVVKEKDGQTFDAFTDPEIRYRQRYVD 172

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +  + +  +KR++II++MR       ++E  TPIL        AR F+         
Sbjct: 173 LIVNPHVREVFIKRSKIISTMREYFNQFGYVEVETPILQPIPGGAAARPFITHHNALDID 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  GFD  ++    FR+E       P EF  +++ +++ +   ++
Sbjct: 233 QY-LRIASELYLKKLIVGGFDGVYEFGKNFRNEGMDRTHNP-EFTVMEIYVAYKDYLWMM 290

Query: 251 NTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIR 284
              E +L  V        T             F R+   DAIR
Sbjct: 291 EFTERMLEKVALALHGTTTVQIDGREISFKAPFRRLTMTDAIR 333



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 4/93 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGM 533
              +++L  NG E+ +     +     L+ F       E  ++          RA + GM
Sbjct: 407 LTERFELFVNGKELCNAYSELNDPIDQLERFQEQLRLSEKGDDEAMFIDMDFVRALEYGM 466

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P   G+  GIDR+ M + G  ++++V  FP  +
Sbjct: 467 PTCSGMGIGIDRLTMFMTGNSSIQDVLFFPQMR 499


>gi|229496852|ref|ZP_04390561.1| lysyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316263|gb|EEN82187.1| lysyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 581

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 107/273 (39%), Gaps = 10/273 (3%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             VRL+G +   R  G   F+++ D  G  Q+    DS        + +        +  
Sbjct: 58  QRVRLAGRIMGRRIMGKASFVELADSTGRIQIYITRDSIADGENTDLYNVVFKKCLDIGD 117

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFKYRFLD 132
               E       TG++ + A  + +LS +      V  +             R++ R++D
Sbjct: 118 FIGVEGYVFKTQTGEVSVHALSLTVLSKSLRPLPIVKEKDGKVFDGFTDPEQRYRRRYVD 177

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +  +    +KR +I  SMR       ++E  TPIL +      AR F+         
Sbjct: 178 LLVNDGVRDIFLKRNKIFTSMRNFFNEHGYLEVETPILQSIPGGAAARPFITHHNALDIP 237

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  GF+  ++ +  FR+E       P EF  +++ +++ + + ++
Sbjct: 238 LY-LRIANELYLKRLIVGGFEGVYEFSRNFRNEGMDRTHNP-EFTCMEIYVAYKDYNWLM 295

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
           +  E++L  + +E      V      I +    
Sbjct: 296 DFTESMLSRIAQEVLGTTEVKVGDHEISFRPPF 328



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 4/133 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K          P+      K +        +++L+ NG E+A+     +      + F
Sbjct: 383 EGKYIQPTFITDYPKEMSPLTKEHRTNPELTERFELMVNGKELANAYSELNDPIDQRKRF 442

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +     E  ++          RA + GMPP  G+  G+DR+VMLL G ++++EV  FP 
Sbjct: 443 EDQLALSEKGDDEAMFIDQDFLRALEYGMPPTAGLGIGMDRLVMLLTGQESIQEVLFFPQ 502

Query: 565 SQNFCDLLMGSPS 577
            +    +    P+
Sbjct: 503 MKPEAVVKRDKPA 515


>gi|90077708|dbj|BAE88534.1| unnamed protein product [Macaca fascicularis]
          Length = 501

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 87/379 (22%), Positives = 150/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL +      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--------- 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +         
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 118 ----REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                   +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F       N       F      LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    + ++ +    ++F +  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 345 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 394

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 395 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 445

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 446 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501


>gi|167771370|ref|ZP_02443423.1| hypothetical protein ANACOL_02736 [Anaerotruncus colihominis DSM
           17241]
 gi|167666010|gb|EDS10140.1| hypothetical protein ANACOL_02736 [Anaerotruncus colihominis DSM
           17241]
          Length = 516

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 70/390 (17%), Positives = 126/390 (32%), Gaps = 57/390 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWV 70
            S  G+ V + GWV  +R    I F+++ D      +         + F     +     
Sbjct: 66  ESFDGAEVTVCGWVRTIRDSKAIGFIELNDGSAFKNLQIILETEKVSNFAEIVKLNVGSA 125

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           +C+ G V+               +E+ A ++ +L  A     P+  +R   E +R     
Sbjct: 126 ICVRGRVILTPQ-------AKQPLEVHADEV-VLEGASTPDYPLQKKRHTLEFLR-SIAH 176

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++        F+   TP++T S  EGA +    + ++   
Sbjct: 177 LRPRTNTFEAVFRVRSVAAYAIHRFFNERGFVYAHTPLITGSDCEGAGEMFRVTTLDPKN 236

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q +   MA  F + +   P FR E+  + R   E
Sbjct: 237 PPLTEDGAVDFAQDFFGKATGLTVSGQLEGECMAMAFGKIYTFGPTFRAENSNTARHAAE 296

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +  D +   E++++ V             F                   
Sbjct: 297 FWMIEPEIAFADLADNMELAEDMIKYVLSYVLEQCPQEMAFFNSFYDKGLIERLDSIISS 356

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
               I Y +AI      K   + P+       TEH  +   +V  +     P +      
Sbjct: 357 DFGHITYTEAIEILEKAKDQFQYPVYWGCDLQTEHERYLTEQVMKR-----PVFVTDYPK 411

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                  R   DR    A     PG+  I 
Sbjct: 412 EIKAFYMRLNDDRKTVAAVDLLVPGIGEII 441



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 47/139 (33%), Gaps = 26/139 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              ++ D+P     +E K        F M                     DL+  G  EI
Sbjct: 402 RPVFVTDYP-----KEIK-------AFYMRLNDDRKTVA---------AVDLLVPGIGEI 440

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    +V+L     +G+        +       + G   H G   G +R++M + 
Sbjct: 441 IGGSQREERLDVLLSRMGELGLDPAD----YSWYLDLRRYGGTKHAGYGLGFERLIMYMT 496

Query: 552 GAKNVREVSLFPMSQNFCD 570
           G  N+R+V  FP +    +
Sbjct: 497 GISNIRDVLPFPRTTGSAE 515


>gi|315607440|ref|ZP_07882436.1| asparagine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250872|gb|EFU30865.1| asparagine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 466

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 62/294 (21%), Positives = 115/294 (39%), Gaps = 28/294 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC 58
           M   RT     L  +D G  + + GWV   R    + F+ + D   I   Q+V +P    
Sbjct: 1   MKMKRTKVVDALVSTDFGKDINVKGWVRSHRSSKAVDFIALNDGSTIKNIQIVVDPSLVD 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            ++ KS+ +   L + G ++        +       E+  ++IE+  +      P+  + 
Sbjct: 61  ADLLKSITTGACLSVVGTLVESQGAGQAS-------EIQCKEIEVYGLC-PGDYPMQKKG 112

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E +R KY  L LR +T       R  +  ++        F    TPI+TAS  EGA 
Sbjct: 113 QSFEYMR-KYAHLRLRTNTFGAVFRIRHHMAMAIHRYFHEHGFFYFHTPIITASDCEGAG 171

Query: 179 DFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFR 221
           +    +  N                 F+    +     Q +  L A+     +   P FR
Sbjct: 172 EMFQVTTKNLYNLEKDEEGRIKYDDDFFGKTTSLTVSGQLEGELGATALGAIYTFGPTFR 231

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            E+  + R   EF+ ++ E++F+EQ  +++  E+ ++   +   +       FL
Sbjct: 232 AENSNTPRHLAEFWMIEPEVAFLEQQGLMDLEEDFIKYCVKWALDNCKDDLEFL 285



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 34/148 (22%)

Query: 436 WIMDFPFYEWNEEEKKIDFAHN---------------PFTMPQGGM-ESLKGNDLLSIKA 479
           W +D        E ++    H+                F M       +++G D+     
Sbjct: 333 WGVD-----LASEHERYLVEHHFRKPVIMTDYPKDIKAFYMKINEDGRTVQGTDV----- 382

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
               L     EI  G +R    + ++       +  + +           + G  PH G 
Sbjct: 383 ----LFPQIGEIIGGSVREENYDKLMGEVERRNVPMKDMW----WYLDTRKYGTCPHAGF 434

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             G +R+++ + G +N+R+V  FP +  
Sbjct: 435 GLGFERLILFVTGMQNIRDVIPFPRTPK 462


>gi|75764905|ref|ZP_00744256.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74487607|gb|EAO51472.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 430

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 57/295 (19%), Positives = 115/295 (38%), Gaps = 18/295 (6%)

Query: 28  HRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINA 87
              R  G   F  I+D +G  Q+    D+   E  +   +  +    G ++    +    
Sbjct: 1   MTKRGKGKTGFAHIQDLHGQVQMYVRKDTVGDEEYELFTTADL----GDLVGIEGKVFKT 56

Query: 88  NIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRT 146
           N+  G++ + A    +L+ +   PLP           R++ R+LDL       +  V R+
Sbjct: 57  NV--GELSVKATGFTLLTKSLR-PLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRS 113

Query: 147 RIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
           +II  MR  +    ++E  TP++ A +    AR F           Y +  A + + + L
Sbjct: 114 KIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFTTHHNALDMELY-MRIAIELHLKRL 172

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           +  G ++ ++I   FR+E   +   P EF  +++  ++ + +DI+   EN++  + ++  
Sbjct: 173 IVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEAYADYNDIMKLTENMVAHIAKKVL 231

Query: 266 NGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPIIMHNVTEHFVHSEFRV 313
              T+      I  +    R             D  NP+ +    E        +
Sbjct: 232 GTTTILYGDYEINLEPEWTRLHMVDAIKQHSGADFWNPMSVEEARELAKEHNVEI 286



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 8/158 (5%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLS 476
             +A+E  +   +  E   I++  F+E   E+K I    + FT     +  L K ND   
Sbjct: 276 RELAKEHNVEIKDTMEVGHIIN-EFFEQKVEDKLIHQ--HLFTGHPVEISPLAKKNDEDP 332

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMS----EVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
               +++L     E A+     +      E             +           A + G
Sbjct: 333 RFTDRFELFIVAREHANAFTELNDPIDPKERFEAQLKEREQGNDEAHMMDDDYIEALEYG 392

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           MPP GG+  GIDR+VMLL  A ++R+V LFP  ++  D
Sbjct: 393 MPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD 430


>gi|330504611|ref|YP_004381480.1| lysyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328918897|gb|AEB59728.1| lysyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 500

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 62/309 (20%), Positives = 123/309 (39%), Gaps = 34/309 (11%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C +L     G            V+++G +   R      F+ ++D  G  QV  + 
Sbjct: 42  RDSLCAELQKQYEGKSKEELEAAAIPVKIAGRIMLNRG----AFMVLQDTSGRLQVYVDR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                E  +++++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KGLPAETLEAIKTWDLGDI------IAAEGTLARSGKGDLYVHMTNVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +   ++  + R+++I  +R  +    F+E  TP+L T  
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEETRHTFRVRSQVIAHIRRFLNDRGFLEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F         + + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFETHHNALDMAMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAI 283
           EF  L+   ++ +  D ++  E + R +                      F+R+   D+I
Sbjct: 269 EFTMLEFYQAYADYRDNMDLTEELFRELALAVLGTTDVPYGDKVFHFGEPFVRLSVYDSI 328

Query: 284 RRYGTDKPD 292
            +Y  D  +
Sbjct: 329 LKYNPDITE 337



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K++  H     P       + ND       +++L   G EIA+     + +E   + F
Sbjct: 376 ESKLEQPHFITEYPFEVSPLARRNDQNPNVTDRFELFIGGREIANAYSELNDAEDQAERF 435

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 K+  ++          RA + GMPP  G   GIDR+VMLL  + ++R+V LFP 
Sbjct: 436 LAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPH 495

Query: 565 SQ 566
            +
Sbjct: 496 MR 497


>gi|229105186|ref|ZP_04235835.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228678112|gb|EEL32340.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 463

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 130/376 (34%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWV 70
                   V++SGW+  +R      F+++ D      V    + +   F+    +     
Sbjct: 13  TEKYADQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G V++               E+ A+KI+I  +++    P+  +R   E +R     
Sbjct: 73  VKVEGKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++        F+   TPI+T S  EGA +    +  +   
Sbjct: 124 LRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 VSKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F E  D+++  E++L+   +          +F                   
Sbjct: 244 FWMVEPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVINS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              RI Y +AI+       D + P+   +   TEH  +    +F + + V    +     
Sbjct: 304 DFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  RMNE
Sbjct: 361 -------KAFYMRMNE 369



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M           D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMRMNE-------DGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|70954415|ref|XP_746255.1| lysine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56526803|emb|CAH78087.1| lysine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 516

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 101/573 (17%), Positives = 191/573 (33%), Gaps = 115/573 (20%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           + +Y+    G+       + + ++G + R+   G  + F D+       QV+AN      
Sbjct: 49  IEKYKDLENGEHLEE---TTLSVTGRIMRISSSGQKLRFFDLVGDGKRIQVLANFSFHDK 105

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E +  V     +    +V              G++ +  ++  +LS    +    +G ++
Sbjct: 106 EKSNFVECYDKIRRGDIV---GIIGFPGKSKKGELSIFPRETILLSPCLHMLPMKYGLKD 162

Query: 120 YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGA 177
               IR++ R+LDL  +   +N  + RT+IIN +R  +  + FIE  TP +   +    A
Sbjct: 163 T--EIRYRQRYLDLIVNESTRNIFITRTKIINFLRSFLNDQGFIEVETPSMNLVAGGASA 220

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R F+          Y L  A +   ++L+  G DR ++I   FR+E   +   P EF   
Sbjct: 221 RPFITHHNDLDIDLY-LRIATELPLKMLIVGGLDRVYEIGKVFRNEGIDNTHNP-EFTSC 278

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +   ++ +  D++   E     +         +               Y  D P+ ++PI
Sbjct: 279 EFYWAYADYYDLIKWSEEFFSKLVYHLFGTYKIL--------------YNKDGPE-KDPI 323

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            +              + KI  V    ++  +  +    +    ++M             
Sbjct: 324 EID---------FTPPYPKISLVEELEKITKVKLEQPFDSPETINKM------------- 361

Query: 358 YIFWRLDESGNVAGMGP--VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
                + +  N+    P   AK L+ + +  I      Q     FFI   P      A  
Sbjct: 362 ---INIIKENNIEMPNPPTAAKLLDQLASHFIENIYQNQX----FFIIEHPQIMSPLAKY 414

Query: 416 ARNH--IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            R+   + + L +  C                 E        ++PF   +      K  +
Sbjct: 415 HRSKPGLTERLEMFICGK---------------EVLNAYTELNDPFKQKECFSAQQKDKE 459

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
               +A+  D                                            A +  +
Sbjct: 460 KGDAEAYHCD---------------------------------------AAFCTALEYAL 480

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG+  GIDRI M L     +++V LFP  +
Sbjct: 481 PPTGGLGLGIDRITMFLTNKNCIKDVILFPTMK 513


>gi|229076061|ref|ZP_04209029.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|229099019|ref|ZP_04229953.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229118050|ref|ZP_04247409.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228665273|gb|EEL20756.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228684247|gb|EEL38191.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228706924|gb|EEL59129.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 463

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 130/376 (34%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWV 70
                   V++SGW+  +R      F+++ D      V    + +   F+    +     
Sbjct: 13  TEKYADQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G V++               E+ A+KI+I  +++    P+  +R   E +R     
Sbjct: 73  VKVEGKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++        F+   TPI+T S  EGA +    +  +   
Sbjct: 124 LRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 VSKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F E  D+++  E++L+   +          +F                   
Sbjct: 244 FWMVEPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVINS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              RI Y +AI+       D + P+   +   TEH  +    +F + + V    +     
Sbjct: 304 DFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  RMNE
Sbjct: 361 -------KAFYMRMNE 369



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 70/204 (34%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M           D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMRMNE-------DGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V+++    +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVERIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|323342365|ref|ZP_08082597.1| lysine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463477|gb|EFY08671.1| lysine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 494

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 68/345 (19%), Positives = 130/345 (37%), Gaps = 21/345 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
           Y + S  +L   +     +++G V   R  G   F+ ++D  G  QV    D+     FE
Sbjct: 44  YDSKSKEELAELEA--TTKIAGRVMTKRVMGKAGFMHLQDRDGQIQVYVRKDTVGDLAFE 101

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K +    +L ++G +   +          G++ + A ++  L+ A   PLP       
Sbjct: 102 YFKELDLGDILGVEGTIFRTNH---------GELSVKASELTHLTKALR-PLPDKFHGLQ 151

Query: 121 PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGAR 178
            +  R++ R+LDL  +    +  + R  I+ S+R        +E  TP+LT   S   AR
Sbjct: 152 DKEERYRRRYLDLIMNEDSRRTAMLRPLIMRSIRKFFDDRGLVEVETPVLTPILSGAAAR 211

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+         FY L  A +   + L+  G +  ++I   FR+E       P EF  ++
Sbjct: 212 PFVTHHNTLDMEFY-LRIATELPLKRLIVGGMEGVYEIGRLFRNEGMSPKHNP-EFTTIE 269

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
             +++ +  D+++  E +L  +  E      +      +      RR      D+   + 
Sbjct: 270 AYVAYADMYDMMDISEGLLEYLAHEVLGTTEIVYQGTELSLKGPYRR--VHMVDIIKDVT 327

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
             +        E    +K  ++N      +           FC+ 
Sbjct: 328 GVDFWNVKSDEEAVAIAKEHNINMAKHQLSFGHVVNEFFETFCEE 372



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 7/156 (4%)

Query: 418 NHIAQELGI-INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             IA+E  I +  +   F  +++  F+E   EEK I      +  P       K N    
Sbjct: 341 VAIAKEHNINMAKHQLSFGHVVN-EFFETFCEEK-IVQPTFVYGHPVEVSPLAKKNPEDP 398

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS----NVGISKEVVENRFGGLYRAFQCG 532
               ++++  +  E A+     +      + F        +  E           A + G
Sbjct: 399 RFTDRFEMFIDAREYANAFSELNDPIDQRERFESQLSERELGNEEANEMDVDYVEALEYG 458

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           MPP GGI  G+DR++MLL  + ++R+V LFP  +  
Sbjct: 459 MPPTGGIGIGLDRLIMLLTDSASIRDVLLFPHMKKR 494


>gi|94987146|ref|YP_595079.1| asparaginyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|123385048|sp|Q1MQG9|SYN_LAWIP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|94731395|emb|CAJ54758.1| Aspartyl/asparaginyl-tRNA synthetases [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 455

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 63/335 (18%), Positives = 119/335 (35%), Gaps = 43/335 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GW+   R   G +FL++ D   +   Q + N  SA +++   V +   + + G ++
Sbjct: 19  VHVGGWIRTRRNAKGFVFLELNDGSCLKNIQCIINEGSAAWDMLDGVNTGACVSVYGKLV 78

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                           E+  +K+ +  +A     P+  +R   E +R     L +R +  
Sbjct: 79  PSPGRG-------QDWEIQVEKMVVHGLAAPEVFPLQKKRHSDEFLR-TIAHLRVRTNKY 130

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS-------F 191
                 R     ++      + F    TPILT S  EGA +    +  +  +       F
Sbjct: 131 GAIFRIRAEAAQAIHNYFYKKGFYYIHTPILTGSDCEGAGEMFRVTTAHSSNDSQSSDNF 190

Query: 192 YAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           +          Q +   +A G  + +   P FR E+  + R   EF+ ++ EM+F +  D
Sbjct: 191 FGKECSLTVSGQLEAECLAMGLGKVYTFGPTFRAENSNTPRHAAEFWMVEPEMAFADLQD 250

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNN---------------------FLRICYDDAIRRYG 287
            +N  E +   V  +    +                          F+R  Y DAI    
Sbjct: 251 NMNLAEELTCEVIRKVLQCHIDDIMLLDKYVQPGLIKALENIIAKPFIRCSYHDAITILL 310

Query: 288 TDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
           +   D   P+   +   +EH  +     F   + +
Sbjct: 311 SSHKDFEFPVTFGLDLQSEHEKYLTEEYFKHPVII 345



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 19/124 (15%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +++ +E K        F M Q   E       L        LV    E+  G  R    +
Sbjct: 346 FDYPKEIK-------AFYMRQNDDEETVAAMDL--------LVPRIGELIGGSQREERLD 390

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +L     +G   + +E  +       + G  PH G   G +R+VMLL G  N+R+V  F
Sbjct: 391 NLLSRIRELG---QSIEEYW-WYLDLRRFGTVPHAGFGLGFERLVMLLTGVSNIRDVLPF 446

Query: 563 PMSQ 566
           P + 
Sbjct: 447 PRTP 450


>gi|254881511|ref|ZP_05254221.1| lysyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294775452|ref|ZP_06740965.1| lysine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319642896|ref|ZP_07997532.1| lysyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|254834304|gb|EET14613.1| lysyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294450693|gb|EFG19180.1| lysine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317385444|gb|EFV66387.1| lysyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 576

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 118/276 (42%), Gaps = 10/276 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +    +    V ++G +   R  G   F++++D  G  QV    D  C + 
Sbjct: 36  NAFSTDIKAEFKDDEEPRKVSVAGRMMSRRVMGKASFIELQDSKGRIQVYITRDDICPDE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + A+++ +LS + +    V  +    
Sbjct: 96  NKEMYNTVFKRLLDLGDFIGIEGFVFRTQMGEISIHAKRLTVLSKSIKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R++DL  +   K   +KR+++ +SMR    ++ ++E  TPIL + + 
Sbjct: 156 YDKFEDPELRYRQRYVDLAVNEEIKDIFIKRSKVYSSMREYFNSKGYMEVETPILQSIAG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y +  A + Y + L+  GF+  ++I   FR+E       P E
Sbjct: 216 GAAARPFITHHNALDMPLY-MRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
           F  +++ +++ + + ++   E ++  +  + +    
Sbjct: 274 FTCMEIYVAYKDYNWMMEFTEKMIEKICLDVNGTTQ 309



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 17/150 (11%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+ NG E+ +     +     L+ F
Sbjct: 378 EGTYIQPTFITDYPKEMSPLTKIHRSNPDLTERFELMVNGKELCNAYSELNDPIDQLERF 437

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  E  ++          RA + GMPP  G+  G+DR+ ML+ G   ++EV  FP 
Sbjct: 438 EEQMRLSEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFPQ 497

Query: 565 SQNFCDLLMGSPSTVSVE----QLRELGLR 590
            +         P  ++ +    +  ELG+ 
Sbjct: 498 MR---------PEKITPKDTPAKFMELGIS 518


>gi|119872193|ref|YP_930200.1| aspartyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119673601|gb|ABL87857.1| aspartyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 429

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 93/385 (24%), Positives = 159/385 (41%), Gaps = 44/385 (11%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SA 57
           M+  +TH   D+     G  V L+GWV  +R  G + F+ +RD  G  Q+          
Sbjct: 1   MYPKKTHWTSDITTDLHGREVTLAGWVWELRDLGKVKFIVLRDREGFVQLTLKVGKTPEH 60

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F +   +  E V+ + G+V +       + I    +E+    I IL+ A+ LPL ++ E
Sbjct: 61  VFRVFSELNREDVIVVKGVVET-------SKIAKRGVEVFPTDITILNKAKPLPLDIWSE 113

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                + R K+R +DL+R          ++I+  +R  +  E F+E  TP +  +S EG 
Sbjct: 114 TP-DLATRLKWRSIDLKRPRNLAVFSLASKILREIRETLYGERFVEVFTPKIIVTSTEGG 172

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +        + ++  L Q+PQ YK+ L AS  +R F+I P FR E   +D    EF  +
Sbjct: 173 AELFPVLYFERVAY--LSQSPQLYKEQLTAS-LERVFEIGPAFRAEKHNTDYHLNEFISV 229

Query: 238 DMEMSFVEQDDILNTMENVLRGV----------FEEFSNGNTVS--NNFLRICYDDAIRR 285
           D E +F+   D+++ +E +++ V            E      V+  +   R+ YD+AI +
Sbjct: 230 DAEAAFMNYHDVMDILEKIMKRVVLVLSENVARLREVGLMPVVTELDKIPRVEYDEAIEK 289

Query: 286 YGTDKPDLRNP----IIMHNVTEHFVHSEFRVFSKILSVNPGYEVW-------------- 327
            G     ++      + M      F  S + +     S+ P Y                 
Sbjct: 290 LGQLGYSVKWGDDFTVEMQKALMRFYGSVYFIIDFPASLRPFYTKRKENDRSESYDLIIN 349

Query: 328 AIPAKGGGGNRAFCDRMNEWARSQG 352
            I    G       D + E  R +G
Sbjct: 350 GIEVASGATRIHKRDELEEEMRKRG 374



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 26/139 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              +I+DFP             +  PF   +   +          ++  YDL+ NG E+A
Sbjct: 317 SVYFIIDFP------------ASLRPFYTKRKEND----------RSESYDLIINGIEVA 354

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  + + +     G+  ++    F      F  GMPPH G   G +R++  LLG
Sbjct: 355 SGATRIHKRDELEEEMRKRGLDPKL----FESHLAVFDYGMPPHAGFGLGFNRLLTALLG 410

Query: 553 AKNVREVSLFPMSQNFCDL 571
             NVR  +L+P  +   + 
Sbjct: 411 LDNVRHATLYPRDRYRVEP 429


>gi|15897124|ref|NP_341729.1| aspartyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284174365|ref|ZP_06388334.1| aspartyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|62287584|sp|Q980V3|SYD_SULSO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|13813305|gb|AAK40519.1| Aspartyl-tRNA synthetase (aspS) [Sulfolobus solfataricus P2]
 gi|261601786|gb|ACX91389.1| aspartyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 429

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 85/303 (28%), Positives = 149/303 (49%), Gaps = 22/303 (7%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            +RTH   +L     GS V+++GWVH VR  GG IF+ +RD  GI Q+V    +  ++  
Sbjct: 1   MFRTHLVSELNPKLDGSEVKVAGWVHNVRNLGGKIFILLRDKSGIGQIVVEKGNNAYDKV 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYP 121
            ++  E  + ++G+V + +            +E+ A+ IEILS A   LPL V G+ +  
Sbjct: 61  INIGLESTIVVNGVVKADAR-------APNGVEVHAKDIEILSYARSPLPLDVTGKVKAD 113

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              R + R LDLRR  +   +  ++  + S R  +    F+E  TP + AS+ EG     
Sbjct: 114 IDTRLRERLLDLRRLEMQAVLKIQSVAVKSFRETLYKHGFVEVFTPKIIASATEGGAQLF 173

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + +F A  Q+PQ YK+ L+A   +R F+IAP +R E+  +     EF  +D+EM
Sbjct: 174 PVLYFGKEAFLA--QSPQLYKE-LLAGAIERVFEIAPAWRAEESDTPYHLSEFISMDVEM 230

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F + +DI+  +E ++  +  +                ++ ++      P++R PI   +
Sbjct: 231 AFADYNDIMALIEQIIYNMINDVKRE-----------CENELKILNYTPPNVRIPIKKVS 279

Query: 302 VTE 304
            ++
Sbjct: 280 YSD 282



 Score = 97.4 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 70/196 (35%), Gaps = 33/196 (16%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA--DARNHIAQELGIINCNCFEFC 435
           +    N      ++   D        G  +KF       + R        + N    +  
Sbjct: 265 NYTPPNVRIPIKKVSYSDAIELLKSKGVNIKFGDDIGTPELRV-------LYNELKEDLY 317

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           ++ D+P+               PF   Q               +  +DL+    EI SG 
Sbjct: 318 FVTDWPWLS------------RPFYTKQKKD--------NPQLSESFDLIFRWLEIVSGS 357

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            RNH+ EV+  +    G++       F    + F  GMPPH G   G+ R++++L G ++
Sbjct: 358 SRNHVKEVLENSLKVRGLNP----ESFEFFLKWFDYGMPPHAGFGMGLARVMLMLTGLQS 413

Query: 556 VREVSLFPMSQNFCDL 571
           V+EV  FP  +     
Sbjct: 414 VKEVVPFPRDKKRLTP 429


>gi|15598896|ref|NP_252390.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|38258401|sp|Q9HXU0|SYK_PSEAE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|9949865|gb|AAG07088.1|AE004789_8 lysyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
          Length = 501

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 140/367 (38%), Gaps = 46/367 (12%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   +  +L  + +   V+++G +   R      F+ ++D     QV  N  +   E 
Sbjct: 52  KQYADKTKEELEAAAI--PVKVAGRIMLNRGS----FIVLQDSSERLQVYVNRKTLPEET 105

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
              +++  +  I G      AE + A    G + +    + +L+ +   PLP        
Sbjct: 106 LAEIKTWDLGDIIG------AEGVLARSGKGDLYVDMTSVRLLTKSLR-PLPDKHHGLTD 158

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
              R++ R++DL  +   ++  + R+++I  +R  +    F+E  TP+L T      A+ 
Sbjct: 159 TEQRYRQRYVDLMVNEETRHTFRVRSQVIAHIRRFLSERGFLEVETPMLQTIPGGAAAKP 218

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F         + + L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  L+ 
Sbjct: 219 FETHHNALDMAMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP-EFTMLEF 276

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D ++  E + R + +       V               YG        P + 
Sbjct: 277 YQAYADYEDNMDLTEELFRELAQSVLGTTDVP--------------YGDKVFHFGEPFVR 322

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V +  +     +      +N   +  AI  K G             A+  G  GL  +
Sbjct: 323 LSVFDSILKYNPEI--TAADLNDVEKARAIAKKAG-------------AKVLGHEGLGKL 367

Query: 360 FWRLDES 366
              + E 
Sbjct: 368 QVMIFEE 374



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K++  H     P       + ND       +++L   G EIA+     + +E   + F
Sbjct: 377 EHKLEQPHFITRYPFEVSPLARRNDEDPSVTDRFELFIGGREIANAYSELNDAEDQAERF 436

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 K+  ++           A + GMPP  G   GIDR+VMLL  + ++R+V LFP 
Sbjct: 437 MLQVKEKDAGDDEAMHYDADFINALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPH 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|269793269|ref|YP_003318173.1| asparaginyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100904|gb|ACZ19891.1| asparaginyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 435

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 70/268 (26%), Positives = 107/268 (39%), Gaps = 14/268 (5%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLC 72
             G  V + GWV+  R  G I FL +RD  G  Q V    S   E+   AKS+  E  + 
Sbjct: 14  HEGKRVTIKGWVYNKRSSGKIHFLQVRDGSGFIQAVMERSSVSEELFAAAKSLWLEASVE 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I+G V                 EL    + I  V+         ++E+       +R L 
Sbjct: 74  IEGTVRRDDR-------APSGFELGVTDLRI--VSNPTLEYPISKKEHGIDFLLDHRHLW 124

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       +  R R+I S R  + ++ F+   +PILT S  EGA         + G  Y
Sbjct: 125 LRSRRQRCIMAIRDRVILSCRNFLHSKGFMLVDSPILTGSIGEGADGLFELDYFDLGKAY 184

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q  Q Y +    + + R +   P FR E  ++ R   EF+ ++ E +F E  D +  
Sbjct: 185 -LAQTGQLYLEAAA-AAYGRVYCFGPTFRAEKSKTRRHLTEFWMIEPEAAFFEHRDNMAL 242

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYD 280
            E ++  + +E    +     FL    D
Sbjct: 243 QEEMVSHLVKEVLEHHEKDLVFLERDVD 270



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 14/110 (12%)

Query: 458 PFTM-PQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
            F M      E L   +DLL+ + +         EI  G  R    +++L +     +  
Sbjct: 332 AFYMKQHPEREDLVLCDDLLAPEGYG--------EIIGGSQREDDLDLLLSSIRAHNLP- 382

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
              E  +       + G  PH G   GI+R V  + G K++RE   +P +
Sbjct: 383 ---EESYSWYLDIRRYGSFPHSGFGMGIERAVAWICGLKHIREAIPWPRT 429


>gi|229545213|ref|ZP_04433938.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|229309758|gb|EEN75745.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1322]
          Length = 450

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 76/352 (21%), Positives = 131/352 (37%), Gaps = 45/352 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPDSAC----------FEI 61
               VG  V++  W+   R  G I FL +RD       VV  P+             F+ 
Sbjct: 15  SNKHVGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIGAFGEEAGTEKFQE 74

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K +  E  + + G++   S             E+    +E++  +E+ P+     +E+ 
Sbjct: 75  IKHLSQETAVMVTGVIKEDSRSKF-------GYEMDITDLEVVGASEDYPITP---KEHG 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +  
Sbjct: 125 TDFLMDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELF 184

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 Q +F  L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 185 ETDYFGQPAF--LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRR 285
           ++   ++ L+  E  ++ + +                           F RI YDDAI  
Sbjct: 242 AYTTHEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIEL 301

Query: 286 YG-----TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
                   D   +       +  E F+ + + V + IL+     + + +   
Sbjct: 302 LQKEEANNDYDHIEWGEDFGSPHETFISNYYGVPTFILNYPKAIKAFYMKPH 353



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF-------QYDLVC----- 486
           D+   EW E+       H  F     G+ +   N   +IKAF       + D+V      
Sbjct: 310 DYDHIEWGEDFG---SPHETFISNYYGVPTFILNYPKAIKAFYMKPHPTREDVVICADLI 366

Query: 487 ---NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
                 EI  G  R    + + +  +  G+S    E  +       + G  PH G   G+
Sbjct: 367 APEGYGEIIGGSERATDYDYLKEKVAEFGLS----EEEYSWYLDLRKYGSVPHSGFGLGL 422

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R V  + G +++RE   FP  
Sbjct: 423 ERAVTFITGNEHIREAIPFPRM 444


>gi|218281530|ref|ZP_03487959.1| hypothetical protein EUBIFOR_00524 [Eubacterium biforme DSM 3989]
 gi|218217319|gb|EEC90857.1| hypothetical protein EUBIFOR_00524 [Eubacterium biforme DSM 3989]
          Length = 637

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 68/320 (21%), Positives = 128/320 (40%), Gaps = 24/320 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y   +  +L    V   V+++G +   R  G   F++I+D  G  Q+    D    +  +
Sbjct: 43  YEDKTKEELDELQV--TVKIAGRIMTKRRQGKAGFMNIQDREGQIQIYVRKDEIGDDQYE 100

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             +   +  I G+      E        GQ+ + A+    LS +   PLP          
Sbjct: 101 IFKKNDIGDIVGI------EGTVMKTDHGQLSVRAKNYTHLSKSLR-PLPEKFHGLTDVE 153

Query: 124 IRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFL 181
            RF+ R++DL  +   K+I + R +II +++  +  +  +E  TP++        AR F+
Sbjct: 154 ERFRRRYVDLIMNPEAKHIALTRPKIIRAIQHYLDGQGLVEVETPVMQPILGGASARPFV 213

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                    FY L  A +   + L+  G +  ++I   FR+E   +   P EF  ++  +
Sbjct: 214 THHNTLNMDFY-LRIATELPLKRLIVGGLEGVYEIGRLFRNEGMDAMHNP-EFTTVEAYV 271

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTD-K 290
           ++ +   +++ +E +   V  E      ++           F RI   DAI+   G D  
Sbjct: 272 AYSDLHGMMDLIEGLFDSVANEVLGTTDITYQGTQLSLKAPFKRIHMVDAIKEACGVDFW 331

Query: 291 PDLRNPIIMHNVTEHFVHSE 310
            D+     +    EH +  E
Sbjct: 332 QDMSYEEAVKLAEEHDIEVE 351



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 61/155 (39%), Gaps = 20/155 (12%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   EE  +       +P ++    +      D     A +Y+L   G E A+     
Sbjct: 364 FFEKYVEETIVQPTFVYGHPTSISP--LAKKNKKDPR--FADRYELFICGHEYANAFSEL 419

Query: 499 HMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      + F      +E+ ++           A + G+PP GG+  GIDR VMLL   +
Sbjct: 420 NDPIDQRERFEKQLELRELGDDEANEVDTDYVEALEYGLPPTGGVGLGIDRFVMLLTDQR 479

Query: 555 NVREVSLFPMSQNFCD---------LLMGSPSTVS 580
            +REV LFP  +N  D          +  +P  V 
Sbjct: 480 TIREVLLFPHMKNLGDSNKKAQVKKPVESAPVKVD 514


>gi|160916179|ref|ZP_02078386.1| hypothetical protein EUBDOL_02206 [Eubacterium dolichum DSM 3991]
 gi|158431903|gb|EDP10192.1| hypothetical protein EUBDOL_02206 [Eubacterium dolichum DSM 3991]
          Length = 495

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 58/297 (19%), Positives = 113/297 (38%), Gaps = 21/297 (7%)

Query: 4   YRTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
            RTH  G +             D    V+++G +   R  G   F+ I+D  G  Q+   
Sbjct: 31  KRTHKSGQIRAEYENCSKEELADKAVNVKIAGRIMTKRRQGKAGFMHIQDLDGKIQIYVR 90

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D    E  +  +   +  I G+      E        G++ + A+    LS +   PLP
Sbjct: 91  KDEIGEEQYEIFKKSDIGDIVGI------EGQVMKTDHGELSVRAKVYTHLSKSLR-PLP 143

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                      R++ R++DL  +    +  + R RII +++  +  +  +E  TP+L   
Sbjct: 144 EKFHGLQDVEERYRRRYVDLIMNPEAKRIALMRPRIIRAIQRYLDGKGLVEVETPVLQPI 203

Query: 173 -SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                AR F+         FY +  A +   + L+  G +  ++I   FR+E    +  P
Sbjct: 204 LGGANARPFVTHHNTLDMDFY-MRIATELPLKRLIVGGLEGVYEIGRLFRNEGMDKNHNP 262

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
            EF  ++  +++ + + ++   E ++  V  +      V+     I      +R   
Sbjct: 263 -EFTTVEAYVAYSDMEGMMELTEGLMENVAFDVLGTTDVTWREKEISLKAPFKRLHM 318



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 51/131 (38%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   E+  +          +    S +  D       +++L+ +G E  +     +  
Sbjct: 364 FFEKYVEDTIVQPTFVYGHPVEISPLSKRCPD-DPRFTERFELLIDGAEFCNAFSELNDP 422

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               Q F      KE               A + G+PP GG+  GIDR VMLL G   +R
Sbjct: 423 IDQKQRFEAQLAEKENGNEEACEMDTDFVEALEYGLPPTGGVGIGIDRFVMLLTGQDTIR 482

Query: 558 EVSLFPMSQNF 568
           EV LFP  +N 
Sbjct: 483 EVLLFPHMKNR 493


>gi|254424532|ref|ZP_05038250.1| asparaginyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196192021|gb|EDX86985.1| asparaginyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 468

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 71/356 (19%), Positives = 125/356 (35%), Gaps = 49/356 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L     G  + + GWV   R      F+++ D   +  +         +  K +      
Sbjct: 11  LKSGQPGESLTIQGWVRTKRSAKKFTFIEVNDGSSMNGLQVIAPEDIPDYEKQIERIS-- 68

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  +     +     ++EL A +IE+   ++    P+  +R   E +R     L
Sbjct: 69  --TGASVQITGTLAESPGKGQRVELQASEIEVFGESDGETYPLQKKRHSFEFLR-TIGHL 125

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +TL      R     ++       +F+   TPILTAS  EGA +    +R N    
Sbjct: 126 RSRTNTLGAVFRVRNACATAIHEFFWKRDFLWMHTPILTASDCEGAGEMFTVTRFNLDSI 185

Query: 190 ------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q +  +M+  F   +   P FR E+  + R   EF
Sbjct: 186 PKTESGKADYGQDFFGRPAYLTVSGQLEAEIMSMAFSNVYTFGPTFRAENSNTARHLAEF 245

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSNN 273
           + ++ EM+F + +  ++  E  L+ VF                           N + N+
Sbjct: 246 WMVEPEMAFCDLEGNMDLAEAFLKYVFSYVMEHCADDMAFFNQRIDKTVLETAENIIDND 305

Query: 274 FLRICYDDAIRRYGTDKPD----LRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
           F RI Y DAI +      +       P+   +   +EH  +    +F K + V   
Sbjct: 306 FERITYTDAIAQLERAIENGDKTFEFPVKWGIDLQSEHERYLAEELFKKPVIVTDY 361



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 77/234 (32%), Gaps = 34/234 (14%)

Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD--MQDG 396
           AF   +  +        +A+   R+D++        +      +       +L+  +++G
Sbjct: 266 AFLKYVFSYVMEHCADDMAFFNQRIDKTVLETAENIIDNDFERITYTDAIAQLERAIENG 325

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D  F             ++   ++A+EL        +   + D+P               
Sbjct: 326 DKTFEFPVKWGI--DLQSEHERYLAEELFK------KPVIVTDYP------------AEI 365

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
             F M        + ND     A    L     EI  G  R    +V+ +     G+   
Sbjct: 366 KAFYM--------RLNDDNKTVAAMDVLAPRIGEIIGGAQREERLDVLERRIKAAGLP-- 415

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             +  +       + G  PH G   G +R+V  + G  N+R+V  FP + +  D
Sbjct: 416 --QEDYWWYLDLRRYGTVPHAGFGLGFERLVQFMTGMSNIRDVIPFPRTPDNLD 467


>gi|148707802|gb|EDL39749.1| aspartyl-tRNA synthetase [Mus musculus]
          Length = 574

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 91/379 (24%), Positives = 152/379 (40%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL V      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 123 DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 182

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +   PE    
Sbjct: 183 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 240

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 241 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 300

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 301 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 358

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNFL-----------R 276
           F  LD+EM+F        ++I +T+  + +G+ E F +   TVS  F            R
Sbjct: 359 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 418

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    +  + +    ++F V  K  L+V P Y + 
Sbjct: 419 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFYTMP 478

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 479 DPRNPKQSNSYDMFMRGEE 497



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF             D  + K +  YD+   G EI SG  R H  +++ +   
Sbjct: 466 KYPLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERAL 516

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           + GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP      
Sbjct: 517 HHGIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRL 572

Query: 570 DL 571
             
Sbjct: 573 TP 574


>gi|27363989|ref|NP_759517.1| lysyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|320157368|ref|YP_004189747.1| lysyl-tRNA synthetase (class II) [Vibrio vulnificus MO6-24/O]
 gi|31340442|sp|Q8DEQ9|SYK_VIBVU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|27360106|gb|AAO09044.1| lysyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|319932680|gb|ADV87544.1| lysyl-tRNA synthetase (class II) [Vibrio vulnificus MO6-24/O]
          Length = 510

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 67/292 (22%), Positives = 132/292 (45%), Gaps = 25/292 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G V   R      FL I++  G  Q  A+ D     + K ++ ++    
Sbjct: 66  LEALNHVVAIAGRVMAKRGP----FLVIQETSGRIQAYADKD-----VQKVLKDKYQGLD 116

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++        +    G + ++ ++ E+L+ A   PLP        + +R++ R++DL
Sbjct: 117 IGDIIGVKGALHKSG--KGDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 173

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  V R+++++++R  MI++ F+E  TP++        AR F+          
Sbjct: 174 IVNEDSRNAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFVTHHNALDMPM 233

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++
Sbjct: 234 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMD 291

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
             E +L  V  E     ++            + R+   +AI+ Y  D   ++
Sbjct: 292 LTEELLSSVALEVLGSTSMPYGEHTVEFGGTYTRMSMFEAIKHYNPDHAQIQ 343



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 386 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 445

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 446 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504


>gi|255020529|ref|ZP_05292593.1| Lysyl-tRNA synthetase (class II) [Acidithiobacillus caldus ATCC
           51756]
 gi|254970049|gb|EET27547.1| Lysyl-tRNA synthetase (class II) [Acidithiobacillus caldus ATCC
           51756]
          Length = 495

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 63/295 (21%), Positives = 114/295 (38%), Gaps = 13/295 (4%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RY      +L    V     L G +   R  G   F D++D  G  Q+  + D    +  
Sbjct: 42  RYDQSDAAELDAQAV--QAHLGGRLMSRRIMGKASFADLQDGSGRLQLFFSRDELGEDAY 99

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
              +   +  + G+              TG++ L      +L+ A   PLP         
Sbjct: 100 AQFKELDLGDVIGV------GGQLFRTKTGELSLRVASFTLLAKALR-PLPEKWHGLSDP 152

Query: 123 SIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             RF+ R++DL   ++  +    R++ + ++R  +  + FIE  TP++        AR F
Sbjct: 153 ETRFRQRYVDLIVTESTRRTFRIRSQTVAALRAVLSNDGFIEVETPMMQPIPGGATARPF 212

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +        + Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  L+  
Sbjct: 213 ITHHHALDMTLY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMLEWY 270

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            ++ +    ++  E ++R   +       +    L I   +   R G  +   R 
Sbjct: 271 EAYADYTMAMDRCETLIRAAAQAALGSTDIHYQGLAIHLGEPFARLGVAEAVRRY 325



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 6/95 (6%)

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRA 528
           D       +++L   G E+A+G    +  +     F     +KE  +           RA
Sbjct: 396 DPE--LTDRFELFIAGRELANGFSELNDPDDQAARFRAQVAAKEAGDEEAMFFDADYIRA 453

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            + GMPP  G+  G+DR+VMLL    ++REV LFP
Sbjct: 454 LEYGMPPTAGVGLGVDRLVMLLADQPSIREVILFP 488


>gi|220918011|ref|YP_002493315.1| asparaginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955865|gb|ACL66249.1| asparaginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 434

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 66/305 (21%), Positives = 112/305 (36%), Gaps = 30/305 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWV 70
               G  + L GW+H  R  G + FL +RD  G  Q V    N     F+ +  +  E  
Sbjct: 11  AQHEGKEITLHGWLHNRRSSGKLHFLQLRDGTGTIQCVVFKGNVTPEVFQASDHLPQETS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + GLV       I         EL  + +++  V+        G +E+  +   + R 
Sbjct: 71  LTVTGLVKKDERSPI-------GFELDVRDLQV--VSRPAQEFPIGHKEHGVAFLMEQRH 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R  +  ++R       F     PI T S+ EG          + G 
Sbjct: 122 LWLRSQRQQVILRVRHTVEKAIRDFFDQRGFTLVDAPIFTPSACEGTSTLFEVPYFDLGK 181

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E+++++ D  +
Sbjct: 182 AY-LTQSGQLYMEAA-AMALGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVAYMDLDGDM 239

Query: 251 NTMENVLRGVFE----------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
             ME  +  V +                + S    V   F RI Y +A+         ++
Sbjct: 240 ELMEQFVSYVVQTALEKHRVELATVLERDVSKLENVKAPFPRITYTEAVEVIQKAGHPMK 299

Query: 295 NPIIM 299
               +
Sbjct: 300 WGDDI 304



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 59/206 (28%), Gaps = 36/206 (17%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
           DGD             +     R  +A  L   + +  E      FP   + E  + I  
Sbjct: 236 DGDMELMEQFVSYVVQTALEKHRVELATVLE-RDVSKLENVK-APFPRITYTEAVEVIQK 293

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYD---LVCN---------------------GFE 490
           A +P  M  G      G D  ++ A Q+D   +V                       G +
Sbjct: 294 AGHP--MKWGDDI---GGDEETVVARQFDRPVMVHRYPAEMKAFYFKKDPADPKVALGCD 348

Query: 491 IASGGIRNH-----MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
           + +             E  L          ++ +  F       + G  PH G   G++R
Sbjct: 349 VLAPEGYGEIIGGGQREDDLATLEAAIDHHQLPKQAFEWYLDLRRYGTVPHAGFGMGVER 408

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDL 571
            V  + G  +VRE   F         
Sbjct: 409 CVAWICGLHHVRETIPFARMMERITP 434


>gi|47207856|emb|CAF90609.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 323

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 88/220 (40%), Positives = 138/220 (62%), Gaps = 11/220 (5%)

Query: 89  IITGQIELSAQKIEILSVAEELPLPVFGERE------YPESIRFKYRFLDLRRDTLHKNI 142
           + TG+IE+ A+ +E+ +V  +LP  V    +        ES+R +YR+LDLR   + +N+
Sbjct: 48  MPTGEIEVLAESVEVYNVCRKLPFEVKDFVKMFVVGQKSESLRMQYRYLDLRSSRMQRNL 107

Query: 143 VKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
             R++++  MR  +     F++  TP L   +P GA++F+VPSR   G FY+LPQ+PQQ+
Sbjct: 108 RLRSQLVMKMREFLCNLHGFVDVETPTLFKRTPGGAKEFVVPSR-EPGRFYSLPQSPQQF 166

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           KQLLM +G DRYFQIA C+RDE  + DR P EF Q+D+EMSFVEQ  I++ +E +L+  +
Sbjct: 167 KQLLMVAGIDRYFQIARCYRDEGSKPDRQP-EFTQVDIEMSFVEQTGIMSLVEALLQHSW 225

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
            +      +   F  + +++A+R YG DKPD R  + + +
Sbjct: 226 PDQLGP--LQLPFQTMTFEEAMRDYGVDKPDTRFAMKVSD 263


>gi|146308389|ref|YP_001188854.1| lysyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166229818|sp|A4XXQ6|SYK_PSEMY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|145576590|gb|ABP86122.1| lysyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 505

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 63/309 (20%), Positives = 124/309 (40%), Gaps = 34/309 (11%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   CG+L     G            V+++G +   R      F+ ++D  G  QV  + 
Sbjct: 47  RDSLCGELQKQYEGKSKEELEAAAIPVKIAGRIMLNRG----AFMVLQDTSGRLQVYVDR 102

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                E  +++++  +  I       +AE   A    G + ++   + +L+ +   PLP 
Sbjct: 103 KGLPAETLEAIKTWDLGDI------IAAEGTLARSGKGDLYVNMTSVRLLTKSLR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
                     R++ R++DL  +   ++  + R+++I  +R  +    F+E  TP+L T  
Sbjct: 156 KHHGLTDTEQRYRQRYVDLIVNEETRHTFRVRSQVIAHIRRFLNERGFLEVETPMLQTIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P 
Sbjct: 216 GGAAAKPFETHHNALDMQMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP- 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAI 283
           EF  L+   ++ +  D ++  E + R +                      F+R+   D+I
Sbjct: 274 EFTMLEFYQAYADYRDNMDLTEELFRELALAVLGTTDVPYGDKVFHFGEPFVRLSVYDSI 333

Query: 284 RRYGTDKPD 292
            +Y  D  +
Sbjct: 334 LKYNPDITE 342



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K++  H     P       + ND       +++L   G EIA+     + +E   + F
Sbjct: 381 ESKLEQPHFITEYPFEVSPLARRNDQNPAVTDRFELFIGGREIANAYSELNDAEDQAERF 440

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 K+  ++          RA + GMPP  G   GIDR+VMLL  + ++R+V LFP 
Sbjct: 441 HAQVAEKDAGDDEAMHFDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPH 500

Query: 565 SQ 566
            +
Sbjct: 501 MR 502


>gi|333029319|ref|ZP_08457380.1| Asparaginyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332739916|gb|EGJ70398.1| Asparaginyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 467

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 57/290 (19%), Positives = 110/290 (37%), Gaps = 28/290 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L   D G+ V + GWV   R    + F+ + D   I  V    D   F  E+ 
Sbjct: 6   RTRIVDLLKREDFGAMVNVKGWVRTRRGSKKVNFIALNDGSTINNVQLVVDLGEFDEELL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K + +   + ++G++     +  NA       E+  ++IE+L V +        ++ +  
Sbjct: 66  KKITTGACISVNGVLTESMGKGQNA-------EIQVKEIEVLGVCDSSFPLQ--KKGHSL 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
               +   L  R +T       R  +  ++        F    TP++T S  EGA +   
Sbjct: 117 EFLREIAHLRPRTNTFGAVFRIRHNMAYAIHKYFHDRGFFYFHTPLITGSDAEGAGEMFQ 176

Query: 183 PSRVN--------------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
            + ++              +  F+   A      Q +  L A+     +   P FR E+ 
Sbjct: 177 VTTLDLNNVPKDENGKINYKEDFFGKEANLTVSGQLEGELAATALGAIYTFGPTFRAENS 236

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + R   EF+ ++ E++F + +D +N  E+ ++   +   +       FL
Sbjct: 237 NTPRHLAEFWMIEPEVAFNDNNDNMNLAEDFIKYCVQWALDNCMDDLKFL 286



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 26/150 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAF 480
            E  ++  +      + D+P     +E K        F M Q    ++++G D+      
Sbjct: 342 HERFLVEEHYKRPVIMTDYP-----KEIK-------AFYMKQNEDGKTVRGMDV------ 383

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
              L     EI  G  R    + ++Q      I  + +           + G  PH G  
Sbjct: 384 ---LFPKIGEIIGGSEREVDYDTLMQRVEENHIPLKDMW----WYLDTRKYGSCPHSGFG 436

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R+++ + G  N+R+V  FP + N  D
Sbjct: 437 LGFERLLLFVTGMSNIRDVIPFPRTPNNAD 466


>gi|46578424|ref|YP_009232.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|59798549|sp|Q72G53|SYN_DESVH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|46447835|gb|AAS94491.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311232356|gb|ADP85210.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 461

 Score =  191 bits (485), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 69/357 (19%), Positives = 121/357 (33%), Gaps = 49/357 (13%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT     L  +     +RL GWV   R   G  FL+I D   +  + A  D     +   
Sbjct: 3   RTQIVDALAATAPQPVIRLCGWVRTRRDAKGFSFLEINDGSCLANIQAIVDEGIPAYANI 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +V +   + I G ++    +         + E+  Q + +L  A+    P+  +R   E
Sbjct: 63  GAVSTGAAVDITGELVESPGKG-------QKWEVRVQTLTLLGAADAETYPLQKKRHSDE 115

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R     L  R +        R+    ++        F    TPILT S  EGA +   
Sbjct: 116 FLR-SIAHLRARTNKYGAAFRIRSEAAFAIHEFYRERGFFYVHTPILTGSDCEGAGEMFR 174

Query: 183 PSRV-------------NQGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
            + +              +  F+          Q +   +A G  + +   P FR E+  
Sbjct: 175 VTTLPVEGSATPASGNRYENDFFGKECNLTVSGQLEAETLALGLGKVYTFGPTFRAENSN 234

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN------------------ 268
           + R   EF+ ++ E++F + ++ +N  E++ R V     +                    
Sbjct: 235 TPRHAAEFWMIEPEVAFADLEEDMNLAEDMTRTVVRRILDRCAADLDLFNRFVDTTLVER 294

Query: 269 ---TVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
                   F R  Y +AI            P+   +   TEH  +     F K + V
Sbjct: 295 LRQIADEPFARCSYTEAIELLLKSGKKFEYPVSFGLDLQTEHERYLAEEHFGKPVIV 351



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 4/95 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+    + +G +       +       + 
Sbjct: 366 NDDGRTVAAMDVLVPRIGELIGGSQREERLDVLEARINEMGQNL----EDYWWYLDLRRF 421

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G  PH G   G +R++MLL G  N+R+V  FP + 
Sbjct: 422 GSVPHAGFGMGFERLLMLLTGITNIRDVIPFPRTP 456


>gi|257869635|ref|ZP_05649288.1| asparaginyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257803799|gb|EEV32621.1| asparaginyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 432

 Score =  191 bits (485), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 77/339 (22%), Positives = 133/339 (39%), Gaps = 33/339 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWV 70
              VG  V++  WV   R  G I FL +RD     Q +   +    E+   AK++  E  
Sbjct: 10  KKHVGETVQIGAWVANKRSSGKIAFLQLRDGTAYFQGIVVKNEVGEEVFQLAKNLNQETA 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +   S             E+    IE++  + E P+     +E+       +R 
Sbjct: 70  VLVTGEIREDSRSKF-------GYEIGISGIEVVGESHEYPITP---KEHGTDFLMDHRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  +I +         FI+   PILT S+PEG  D    +  +Q +
Sbjct: 120 LWLRSSKQHAIMQIRNEVIRATYEFFNNNGFIKIDPPILTGSAPEGTTDLFETNYFDQKA 179

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L
Sbjct: 180 Y--LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESL 236

Query: 251 NTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTD-KPDL 293
              E  +  + +   +                       F RI YDDA+     +   D+
Sbjct: 237 EVQEQYVAFLVQSVLDNCDYALDVLGRDRAILEKYTKLPFPRISYDDAVELLQKNGFEDI 296

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
           +      +  E F+ + F     IL+     + + + + 
Sbjct: 297 QWGDDFGSPHETFIANSFDQPVFILNYPKAIKPFYMKSH 335



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 39/113 (34%), Gaps = 10/113 (8%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
              A  PF M               I    Y       EI  G  R    E +L+   N 
Sbjct: 323 YPKAIKPFYMKSHPTRDDVVICADMIAPEGY------GEIIGGSERATDYEFLLEQIRNH 376

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G+     EN +       + G  PH G   G++R V  L G ++VRE   FP 
Sbjct: 377 GLD----ENEYSWYLDLRKYGSVPHTGFGLGLERTVTWLSGIEHVREAIPFPR 425


>gi|120601052|ref|YP_965452.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|166231664|sp|A1V9B8|SYN_DESVV RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|120561281|gb|ABM27025.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 461

 Score =  191 bits (485), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 69/357 (19%), Positives = 121/357 (33%), Gaps = 49/357 (13%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIA 62
           RT     L  +     +RL GWV   R   G  FL+I D   +  + A  D     +   
Sbjct: 3   RTQIVDALAATAPQPVIRLCGWVRTRRDAKGFSFLEINDGSCLANIQAIVDEGIPAYANI 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +V +   + I G ++    +         + E+  Q + +L  A+    P+  +R   E
Sbjct: 63  GAVSTGAAVDITGELVESPGKG-------QKWEVRVQTLTLLGAADAETYPLQKKRHSDE 115

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R     L  R +        R+    ++        F    TPILT S  EGA +   
Sbjct: 116 FLR-SIAHLRARTNKYGAAFRIRSEAAFAIHEFYRERGFFYVHTPILTGSDCEGAGEMFR 174

Query: 183 PSRV-------------NQGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
            + +              +  F+          Q +   +A G  + +   P FR E+  
Sbjct: 175 VTTLPVEGSPTPASGNRYENDFFGKECNLTVSGQLEAETLALGLGKVYTFGPTFRAENSN 234

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN------------------ 268
           + R   EF+ ++ E++F + ++ +N  E++ R V     +                    
Sbjct: 235 TPRHAAEFWMIEPEVAFADLEEDMNLAEDMTRTVVRRILDRCAADLDLFNRFVDTTLVER 294

Query: 269 ---TVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
                   F R  Y +AI            P+   +   TEH  +     F K + V
Sbjct: 295 LRQIADEPFARCSYTEAIELLLKSGKKFEYPVSFGLDLQTEHERYLAEEHFGKPVIV 351



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 4/95 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+    + +G +       +       + 
Sbjct: 366 NDDGRTVAAMDVLVPRIGELIGGSQREERLDVLEARINEMGQNL----EDYWWYLDLRRF 421

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G  PH G   G +R++MLL G  N+R+V  FP + 
Sbjct: 422 GSVPHAGFGMGFERLLMLLTGITNIRDVIPFPRTP 456


>gi|291530007|emb|CBK95592.1| Lysyl-tRNA synthetase (class II) [Eubacterium siraeum 70/3]
          Length = 649

 Score =  191 bits (485), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 72/352 (20%), Positives = 130/352 (36%), Gaps = 26/352 (7%)

Query: 6   THSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           TH    +           V ++G +   R  G   F+DIRD  G  QV    D    +  
Sbjct: 50  THKAQQIRDNFEELEEKDVMIAGRITSWRDMGKANFIDIRDDSGRMQVYVRIDDIGEDNF 109

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  +   +  I G+               G+I + A  I+ L     LPLP        +
Sbjct: 110 KEFKKWDLGDIVGV------SGFVFKTRRGEISVHANSIK-LLSKSLLPLPEKWHGLKDK 162

Query: 123 SIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R+LDL     +    VKR+ I+  +R  + ++ ++E  TP+L        AR F
Sbjct: 163 EERYRKRYLDLIANPEIKDTFVKRSMILREIRSFLDSKGYLEVDTPVLHTLEIGAAARPF 222

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L    + Y + L+  GFDR +++   FR+E   +   P EF  ++M 
Sbjct: 223 VTHHNALDIDMY-LRIETELYLKRLIVGGFDRVYEVGRIFRNEGMDATHNP-EFTSIEMY 280

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ +   +++ +E + R V  +    +TV      I      +R           + M 
Sbjct: 281 QAYTDYYGMMDLIEEMYRTVALKVCGTDTVPYQGNEIEIGKPWKR-----------VTMK 329

Query: 301 NVTEHFVHSEFRVF-SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
              + +   ++  + S   +V       A  A          +   E+   +
Sbjct: 330 EAVKEYTGLDYDSWTSDADAVAQAKTKHAEIADTATKGEVLIELFEEFVEEK 381



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 4/128 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   EEK I      +  P       K          +++   N  E  +     +  
Sbjct: 373 LFEEFVEEKLIQPTI-IYDYPVENSPLAKRKPTDPAFTERFEYFINACEFGNAFSELNDP 431

Query: 502 EVMLQAFSNVGISKEVVENRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
               + F+   + K               A + G+PP GG+  G+DR VMLL  + ++R+
Sbjct: 432 IDQRERFTKQVMEKRKQGANAQIDEDFLTALEYGLPPTGGLGMGLDRFVMLLTDSASIRD 491

Query: 559 VSLFPMSQ 566
           V LFP  +
Sbjct: 492 VLLFPTMK 499


>gi|225011412|ref|ZP_03701850.1| lysyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225003915|gb|EEG41887.1| lysyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 564

 Score =  191 bits (485), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 61/289 (21%), Positives = 114/289 (39%), Gaps = 16/289 (5%)

Query: 8   SCGDLGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
              DL  + V G  V L+G +   R  G   F ++ D  G  QV  N D  C    K++ 
Sbjct: 36  YAKDLPKTYVEGKAVVLAGRLMSRRIQGKASFAELLDSSGRVQVYFNRDEICIGEDKTLY 95

Query: 67  S--EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----- 119
           +     L   G ++           + G+  +   +  +L+ A         + +     
Sbjct: 96  NEVYKKLLDIGDIIGVKGTLF--TTMVGEQTVKVTEFTVLNKALRPLPLPKTDADGNSFD 153

Query: 120 --YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
                 +R++ R++DL  +   KN    R++I  ++R  +  + ++E  TPIL       
Sbjct: 154 EFNDPELRYRQRYVDLIVNPKVKNTFLQRSKITTAIRDFLTEKEYLEVETPILQPIPGGA 213

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+          Y L  A + Y + L+  GF+  F+ A  FR+E       P EF 
Sbjct: 214 TARPFVTHHNALNTPLY-LRIANELYLKRLIVGGFEGVFEFAKDFRNEGMDRTHNP-EFT 271

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            +++ +++ +   ++ T E +L  +  E      V+    +I +     
Sbjct: 272 VMELYVAYKDYFWMMETTEELLEKIAMEVHGTPDVTVGDHQISFKSPYP 320



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 21/170 (12%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +   +    +++L+ NG E+A+     +      + F
Sbjct: 374 EHHYIQPTFITDYPKSMSPLTKEHRSNAKLTERFELMVNGKELANAYSELNDPIDQRERF 433

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  E  ++          RA + GMPP  GI  GIDR+VML+    +++EV  FP 
Sbjct: 434 EAQLSLSEKGDDEAMFIDQDFLRALEYGMPPTSGIGIGIDRLVMLMTNNSSIQEVLFFPQ 493

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISVTTILRNVYGLK 614
            +               EQ     + + E  K I++    +   ++  +K
Sbjct: 494 MK--------------PEQKA---VSLTEEEKNIIQQIKKSETTDLISIK 526


>gi|229822933|ref|ZP_04449003.1| hypothetical protein GCWU000282_00225 [Catonella morbi ATCC 51271]
 gi|229787746|gb|EEP23860.1| hypothetical protein GCWU000282_00225 [Catonella morbi ATCC 51271]
          Length = 437

 Score =  191 bits (485), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 74/320 (23%), Positives = 123/320 (38%), Gaps = 35/320 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCI 73
           +   V +  WV   R  G I FL +RD         V A+     F +AK +  E  + +
Sbjct: 18  IDQTVIIKAWVTNKRSSGKIAFLQLRDGSAYFQAIVVKADVSEETFALAKGLNQETSVKV 77

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G + + +   +         EL  Q IE++  + + P+     +E+       +R L L
Sbjct: 78  VGKIQADTRSAL-------GYELLVQDIEVIGESHDYPITP---KEHGTDFLMDHRHLWL 127

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +    M  E  I+   PILT S+PEG  +       ++ +F  
Sbjct: 128 RSSKQHAIMQIRNEIIRATYEFMNQEGLIKVDPPILTGSAPEGTTELFHTKYFDEDAF-- 185

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ +++E++FVE ++ L   
Sbjct: 186 LSQSGQLYLEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMMEVELAFVEHEENLQFQ 244

Query: 254 ENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAI---RRYGTDKPDLR 294
           E  +  +     +                       + RI Y DAI      G D     
Sbjct: 245 ERYVAHLVRNVIDHCGLALKTLNRDVAVLEQYTKLPYPRISYTDAIKLLNDNGFDDIQWG 304

Query: 295 NPIIMHNVTEHFVHSEFRVF 314
           +     + T      +  +F
Sbjct: 305 DDFGSPHETFIASQYDRPIF 324



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 26/134 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN--GFE 490
              +I+++P             A  PF M           D  ++     D++      E
Sbjct: 321 RPIFIVNYP------------KAIKPFYMRINE------EDPRTVLCA--DMIAPEGYGE 360

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           +  G  R    E + +      +        +       + G  PH G   G++R V  L
Sbjct: 361 VIGGSERIVDFETLDENIKAYNLDPSA----YAWYLDLRKYGAVPHSGFGLGLERAVAWL 416

Query: 551 LGAKNVREVSLFPM 564
            G +++RE S FP 
Sbjct: 417 SGIEHIRETSPFPR 430


>gi|328957365|ref|YP_004374751.1| asparagine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673689|gb|AEB29735.1| asparagine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 432

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 66/299 (22%), Positives = 123/299 (41%), Gaps = 16/299 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEW 69
             + VG  V +  WV   R  G I FL +RD  G      V +  +   F++AKS+  E 
Sbjct: 9   SKNHVGEEVEIGAWVANKRSSGKIAFLQLRDGSGFFQGIVVKSEVEEEVFQLAKSLNQET 68

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G++   +             E++ + I+++  + + P+     +E+       +R
Sbjct: 69  SILLTGVIQEDARSKF-------GYEIAVKSIKVIGESHDYPITP---KEHGTEFLMDHR 118

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR    H  +  R  II +       E FI+   PILTA++ E + +       +Q 
Sbjct: 119 HLWLRSSKQHAIMRIRNEIIRATYNFFNEEGFIKVDPPILTANAAEDSTELFHTEYFDQE 178

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           +F  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F++ +  
Sbjct: 179 AF--LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMDHEQS 235

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           L   E  +  + +   +    + N L    +   +      P +     +  + E+   
Sbjct: 236 LEVQEKYVAYLIQSVLDNCDDALNTLERDKEVLKKYTELPYPRISYDDAVTLLNENGFD 294



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 53/155 (34%), Gaps = 32/155 (20%)

Query: 426 IINCNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF---- 480
           ++N N F+   W  DF               H  F   Q        N   +IKAF    
Sbjct: 287 LLNENGFDDITWGDDF------------GSPHETFIANQYDKPVFILNYPKAIKAFYMKP 334

Query: 481 ---QYDLVC--------NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              + D+V            EI  G  R    + + Q   + G+     E  +       
Sbjct: 335 HPEREDVVLCADLIAPEGYGEIVGGSEREVDFDALSQRIKDFGLK----EEDYAWYMDLR 390

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + G  PH G   G++R V  + G +++RE   FP 
Sbjct: 391 KYGSVPHSGFGLGLERTVTWICGTEHIRESIPFPR 425


>gi|154249833|ref|YP_001410658.1| lysyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769382|sp|A7HM68|SYK_FERNB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|154153769|gb|ABS61001.1| lysyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 509

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 68/324 (20%), Positives = 130/324 (40%), Gaps = 26/324 (8%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           +TH+  D+                V  +G +  +R HG   F  I+D YG  Q     D 
Sbjct: 30  KTHTTEDIKKQFEHLSNGEVTDKRVSTAGRIMSIREHGKSAFFHIKDTYGRIQAYIRKDK 89

Query: 57  -ACFEIAKS-VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
              +E  K  V    ++ ++G+V             TG+I +  +K E+L      P+P 
Sbjct: 90  TENYEFFKERVTVGDIVGVEGIV---------FKSNTGEITILVEKFELLVKPLR-PMPE 139

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                  + + ++ R++D+   D   K    R+ II  +R  +  + F E  TPIL   +
Sbjct: 140 KWHGIKDKEVLYRQRYVDMIANDETIKRFRMRSDIIRMIREFLTKKGFFEVETPILQYLT 199

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  A + + +  +  GFD+ ++I   FR+E       P 
Sbjct: 200 GGASARPFITHLNALDIDMY-LRIATELHLKRFIVGGFDKVYEIGKIFRNEGISYKHHP- 257

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  +++  ++ + +D++N  E ++  + E+      ++     I +    RR      D
Sbjct: 258 EFTSIELYQAYADYEDMMNLTEELITYLVEQLYGTTKITYQGQEIDFTRPWRR--VKMRD 315

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSK 316
                +  ++ E    +  +V ++
Sbjct: 316 FIKENLGVDIIEDSDETMAKVLAE 339



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 6/104 (5%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV----GISKEVVENRFGGLYR 527
            D       +++L+  G E+A+     +     L+ F N      +  +  +       R
Sbjct: 386 EDPR--VTERFELIIYGREMANAFSELNDPVDQLERFMNQLRLRDLGDQEAQMLDKDFVR 443

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           A + GMPP GG+  GIDR+VMLL  + N+R+V  FP+ +   D+
Sbjct: 444 ALEYGMPPTGGLGIGIDRLVMLLTDSANIRDVIAFPLVRPEGDI 487


>gi|295132554|ref|YP_003583230.1| lysyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294980569|gb|ADF51034.1| lysyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 563

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 66/352 (18%), Positives = 130/352 (36%), Gaps = 32/352 (9%)

Query: 7   HSCGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           H+  D+  + + G  V ++G +   R  G   F +++D  G  QV  N D  C +  KS 
Sbjct: 34  HTSADIKTNFEEGKKVVIAGRLMSRRIQGKASFAELQDSKGKIQVYFNRDEICTDEDKSK 93

Query: 66  RS--EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE---- 119
            +     L   G  +    E     +  G++ +  +  E+LS +         ++E    
Sbjct: 94  YNDVYKKLLDIGDFIGIQGELFKTQV--GEMTVMVKDFELLSKSIRPLPLPKTDKEGNTY 151

Query: 120 ---YPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
                   R++ R+ DL     + +  VKRT++ ++MR       + E  TPIL +    
Sbjct: 152 DGFTDPEHRYRQRYADLAVNPKVKEIFVKRTKLFSAMRNFFNEAGYFEVETPILQSIPGG 211

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+          Y L  A + Y + L+  GFD  ++ +  FR+E       P EF
Sbjct: 212 AAARPFITHHNALDIPLY-LRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EF 269

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
             +++ +++ + + +++  E +L       +     +              +G  + D +
Sbjct: 270 TAMEIYVAYKDYNWMMDFTEKLLEHCAMAVNGTTEAT--------------FGKHQVDFK 315

Query: 295 NPIIMHNVTEHFVHSEFRVF--SKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            P     +T+  +              +    +   I      G     D +
Sbjct: 316 APYKRVTMTDAIIEFTGFDITGKSEAELFEAAKSMGIEVDKTMGKGKLIDEI 367



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 5/123 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 373 EGNYIQPTFITDYPKEMSPLCKTHRENPELTERFELMVCGKEIANAYSELNDPIDQRERF 432

Query: 509 SNVGISKEVVENRF-----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                  E  ++           RA + GMPP  G+  G+DR+VM L   ++++EV  FP
Sbjct: 433 EEQLRLAEKGDDEATEFIDQDFLRALEYGMPPTSGLGIGMDRLVMFLTNNQSIQEVLFFP 492

Query: 564 MSQ 566
             +
Sbjct: 493 QMK 495


>gi|148654413|ref|YP_001274618.1| asparaginyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|172048101|sp|A5UPW5|SYN_ROSS1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148566523|gb|ABQ88668.1| asparaginyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 440

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 75/308 (24%), Positives = 122/308 (39%), Gaps = 32/308 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWV 70
               G  V L+GWV      G ++F+ +RD  G+ Q V    N   A F  A+ +  E  
Sbjct: 13  AHHNGEVVTLAGWVVHKTEKGKLVFIRLRDGSGVIQCVVFRNNVTEATFAAAQQLTIESS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             I G V + +          G  EL    IEI+ +A E P+     +E+      ++R 
Sbjct: 73  CRITGAVRADAR-------APGGFELDVNAIEIIQIAPEYPIQP---KEHGVEFLMEHRH 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L +R    H  +  R  II + +  +  + F+   TPILT  + EG  +       + G+
Sbjct: 123 LWIRSSKQHALLRIRAEIIAAAQEWLNDQGFVRFDTPILTPCAAEGTTNLFATPYFDLGT 182

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q  Q Y +  M S F + +   P FR E  ++ R   EF+ ++ E++F   +D L
Sbjct: 183 AY-LGQTGQLYVEAGMMS-FGKVYCFGPTFRAEKSKTRRHLTEFWMIEPEVAFALHEDNL 240

Query: 251 NTMENVLRGVFEEFSNG---------------NTVSNNFLRICYDDAIRRYGTDKPDLR- 294
              E  +  + +                          F RI YD+A++       D+  
Sbjct: 241 ALQERFVSAIVQRVLERRADDLATLERDTKPLERCVPPFPRITYDEALKLIAERHADVEG 300

Query: 295 -NPIIMHN 301
             P+    
Sbjct: 301 CTPLEWGE 308



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 51/150 (34%), Gaps = 21/150 (14%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG--MESLKGNDLL 475
               ++LG  +       +  D P +      ++   A   F M       E     DLL
Sbjct: 304 LEWGEDLGAPHETLIASLF--DRPVFV-----ERFPSAIKAFYMEPDPQRPEVALCADLL 356

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + + +         EI  G  R H   ++ +     G++ +  +          + G  P
Sbjct: 357 APEGYG--------EIIGGSQRIHDPALLERRIREYGLNVDDYQ----WYIDLRRYGSVP 404

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           H G   GI+R    + G  ++RE   FP  
Sbjct: 405 HSGFGMGIERATAWIAGTHHIRETIPFPRM 434


>gi|237736851|ref|ZP_04567332.1| lysyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229420713|gb|EEO35760.1| lysyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 493

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 69/330 (20%), Positives = 137/330 (41%), Gaps = 22/330 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + +G +   R  G   F+ I D  G  QV    D    E    V+   V  I G+     
Sbjct: 57  KTAGRIMAYRGKGKTAFVHIEDISGKIQVYLRQDELGEENYALVKKIGVGDIIGV----- 111

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHK 140
            E       TG++ + A  + +L       LP           R++ R++DL  +  +  
Sbjct: 112 -EGTLFLTSTGELTIRASVVTLLCK-NIRSLPEKFHGLTDVETRYRKRYVDLIMNKDVRD 169

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQ 199
             VKRT+II+++R  +  + F+E  TP++        AR F+          Y L  AP+
Sbjct: 170 TFVKRTKIISAIRRILDGKGFLEVETPLMHPILGGAAARPFITHHNTLDIDLY-LRIAPE 228

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G ++ +++   FR+E   +   P EF  ++M  ++ +  D+++  E ++  
Sbjct: 229 LYLKRLIIGGMEKVYELGRNFRNEGMSTRHNP-EFTMIEMYQAYADYTDMMDLAEEIIST 287

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           + ++    +T++ N   I  ++  R +  D        ++  VT     ++   F +  +
Sbjct: 288 LAKDVLGTSTITYNGKEIVLENFKRIHMVD--------LIKEVTGVDFWNKDITFEEAKA 339

Query: 320 VNPGYEVWA---IPAKGGGGNRAFCDRMNE 346
           +   + V     +   G   N+ F ++  E
Sbjct: 340 LAKEHHVEVPEHMNTVGHIINQFFEEKCEE 369



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 6/130 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  I      +  P       K N+  S    +++L  +  E A+        
Sbjct: 362 FFEEKCEET-IVQPTFVYGHPVEISPLSKRNEEDSRFTDRFELFIDAREYANAFSELQDP 420

Query: 502 EVMLQAFSNVGISKEVVENRF-----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                 F       E   +            A + G+PP GG+  GIDR++MLL  ++++
Sbjct: 421 ADQRGRFEAQVEEAERGNDEATPVIDDDFVEALEYGLPPTGGMGIGIDRLIMLLTNSESI 480

Query: 557 REVSLFPMSQ 566
           R+V  FP  +
Sbjct: 481 RDVLYFPQMK 490


>gi|307291045|ref|ZP_07570931.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306497894|gb|EFM67425.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|315030989|gb|EFT42921.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX4000]
          Length = 450

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 76/352 (21%), Positives = 132/352 (37%), Gaps = 45/352 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEI 61
               VG  V++  W+   R  G I FL +RD       VV  P+          +  F+ 
Sbjct: 15  SNKHVGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQE 74

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K +  E  + + G++   S             E+    +E++  +E+ P+     +E+ 
Sbjct: 75  IKHLSQETSVMVTGVIKEDSRSKF-------GYEMDITDLEVVGASEDYPITP---KEHG 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +  
Sbjct: 125 TDFLMDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELF 184

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 Q +F  L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 185 ETDYFGQPAF--LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRR 285
           ++   ++ L+  E  ++ + +                           F RI YDDAI  
Sbjct: 242 AYTTHEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVLEPFKRITYDDAIEL 301

Query: 286 YG-----TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
                   D   +       +  E F+ + + V + IL+     + + +   
Sbjct: 302 LQKEEANNDYDHIEWGEDFGSPHETFISNYYGVPTFILNYPKAIKAFYMKPH 353



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF-------QYDLVC----- 486
           D+   EW E+       H  F     G+ +   N   +IKAF       + D+V      
Sbjct: 310 DYDHIEWGEDFG---SPHETFISNYYGVPTFILNYPKAIKAFYMKPHPTREDVVICADLI 366

Query: 487 ---NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
                 EI  G  R    + + +  +  G+S    E  +       + G  PH G   G+
Sbjct: 367 APEGYGEIIGGSERATDYDYLKEKVAEFGLS----EEEYSWYLDLRKYGSVPHSGFGLGL 422

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R V  + G +++RE   FP  
Sbjct: 423 ERAVTFITGNEHIREAIPFPRM 444


>gi|288924577|ref|ZP_06418514.1| asparagine--tRNA ligase [Prevotella buccae D17]
 gi|288338364|gb|EFC76713.1| asparagine--tRNA ligase [Prevotella buccae D17]
          Length = 466

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 62/294 (21%), Positives = 115/294 (39%), Gaps = 28/294 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC 58
           M   RT     L  +D G  + + GWV   R    + F+ + D   I   Q+V +P    
Sbjct: 1   MKMKRTKVVDALVSTDFGKDINVKGWVRSHRSSKAVDFIALNDGSTIKNIQIVVDPSLVD 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            ++ KS+ +   L + G ++        +       E+  ++IE+  +      P+  + 
Sbjct: 61  ADLLKSITTGACLSVVGTLVESQGAGQAS-------EIQCKEIEVYGLC-PGDYPMQKKG 112

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E +R KY  L LR +T       R  +  ++        F    TPI+TAS  EGA 
Sbjct: 113 QSFEYMR-KYAHLRLRTNTFGAVFRIRHHMAMAIHRYFHEHGFFYFHTPIITASDCEGAG 171

Query: 179 DFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFR 221
           +    +  N                 F+    +     Q +  L A+     +   P FR
Sbjct: 172 EMFQVTTKNLYNLEKDEEGRIKYDDDFFGKTTSLTVSGQLEGELGATALGAIYTFGPTFR 231

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            E+  + R   EF+ ++ E++F+EQ  +++  E+ ++   +   +       FL
Sbjct: 232 AENSNTPRHLAEFWMIEPEVAFLEQQGLMDLEEDFIKYCVKWALDNCKDDLEFL 285



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 51/148 (34%), Gaps = 34/148 (22%)

Query: 436 WIMDFPFYEWNEEEKKIDFAHN---------------PFTMPQGGM-ESLKGNDLLSIKA 479
           W +D        E ++    H+                F M       +++G D+     
Sbjct: 333 WGVD-----LASEHERYLVEHHFRKPVIMTDYPKDIKAFYMKINEDGRTVQGTDV----- 382

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
               L     EI  G +R    + ++    +  +  + +           + G  PH G 
Sbjct: 383 ----LFPQIGEIIGGSVREENYDKLMGEVEHRNVPMKDMW----WYLDTRKYGTCPHAGF 434

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             G +R+++ + G +N+R+V  FP +  
Sbjct: 435 GLGFERLILFVTGMQNIRDVIPFPRTPK 462


>gi|126180091|ref|YP_001048056.1| aspartyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|166225360|sp|A3CXH4|SYD_METMJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|125862885|gb|ABN58074.1| aspartyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 429

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 83/277 (29%), Positives = 132/277 (47%), Gaps = 25/277 (9%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCIDGLVMS 79
           + GWVH VR  GG+ F  IRD  GI QV         EI   A+SV  E V+ + G V +
Sbjct: 17  IVGWVHEVRDLGGLSFFLIRDRTGIIQVTIPKKKVPAEILDTARSVSRESVVRVRGTVKA 76

Query: 80  RSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                       G  E+  +++EI+S AE  LPL V  +       R   RFLD R+  +
Sbjct: 77  IEK-------APGGREIVPEELEIISTAESPLPLDVAEKVSAEMDTRLDSRFLDARKPRV 129

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                 R+ +  +    + +   I  +TP + A++ EG  +    +   + +F    Q+P
Sbjct: 130 RAIFFIRSAVTCAATAFLASRGCINIATPKIVAAATEGGTELFPIAYFEKEAFMN--QSP 187

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           Q YKQ++MA+GF+  F+I P FR E+  + R   E   LD+E+SF + +D++  +E+++ 
Sbjct: 188 QLYKQMMMAAGFEAVFEIGPIFRAEEHNTVRHLNEATSLDVEVSFADHNDVMELLEDLIV 247

Query: 259 GVFEEFSNGN------------TVSNNFLRICYDDAI 283
            V++  +                 S  F RI Y +AI
Sbjct: 248 HVYDHVAKDCSEHLAELEIDLKVPSKPFPRIPYAEAI 284



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 73/192 (38%), Gaps = 29/192 (15%)

Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-----IINCNCFEFCW 436
            +   + + L +           + ++  +   + +     +L       I     +  +
Sbjct: 259 EHLAELEIDLKVPSKPFPRIPYAEAIEIANKTIEEKLAFGDDLSPAAERAIGDTVGQHYF 318

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I+D+P      + +          MP                   +DL+    E++SG  
Sbjct: 319 IVDWP-----TDIRPYYA------MPYPDRPEF---------CKAFDLMHPRMELSSGAQ 358

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  +++++  S  G+S       F    + F+ GMPPH G   GI+R+VM +L   N+
Sbjct: 359 RIHDHDLLVERISAKGLSP----ESFEFYLKPFRYGMPPHAGWGLGIERLVMTMLDLPNI 414

Query: 557 REVSLFPMSQNF 568
           RE  LFP  ++ 
Sbjct: 415 REAVLFPRDRHR 426


>gi|150010294|ref|YP_001305037.1| asparaginyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|166231669|sp|A6LIA1|SYN_PARD8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|149938718|gb|ABR45415.1| asparaginyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 468

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 58/291 (19%), Positives = 107/291 (36%), Gaps = 27/291 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61
            RT     L     G+ V + GWV   R    + F+ + D   I  V    + D    E 
Sbjct: 5   KRTKIVDVLKSDAFGTTVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDVDKLGDEF 64

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K + +   + ++G++     +  +       +E+ A +IEI   A+    P+  +    
Sbjct: 65  LKPITTGASISVNGILTQSQGKGQS-------VEIQATEIEIFGTADPATYPLQKKGHSM 117

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +   L  R +T       R  +  ++        F    TPI+TAS  EGA    
Sbjct: 118 EFLR-EIAHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQMF 176

Query: 182 VPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDED 224
             +  N              +  F+    +     Q +  L A+   + +   P FR E+
Sbjct: 177 QVTTKNLYDLKKDENGSIIYEDDFFGKQASLTVSGQLEGELAATALGQIYTFGPTFRAEN 236

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
             + R   EF+ ++ E++F +  D +   E  ++   +   +       FL
Sbjct: 237 SNTPRHLAEFWMIEPEVAFNDITDNMELAEEFIKYCVQWALDNCMEDIKFL 287



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P     +E K        F M Q         D  +++A  
Sbjct: 343 HERFLVEDHFKRPVILTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 383

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R    + ++     +GI  + +           + G  PH G   
Sbjct: 384 V-LFPKIGEIIGGSEREADYDKLMTRIDELGIPMKDMW----WYLDTRRFGTVPHSGFGL 438

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G  N+R+V  FP + N
Sbjct: 439 GFERLLLFVTGMANIRDVIPFPRTPN 464


>gi|229133032|ref|ZP_04261873.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228650450|gb|EEL06444.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 437

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 72/279 (25%), Positives = 131/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 10  MKRSLTREC----TEHSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVVQCVLENELAGY- 64

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G +++ +   +        +E+ A ++++L+ AE+LP  +  ++  
Sbjct: 65  ---KVDVESVVQVIGEIVTTTKTEL-------GVEVLAHEVKVLNGAEQLPFEINKKKLQ 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 115 VGLDQLLNERVLSLRHERIAAIFKVKSTLVQSFSEFLIENDFTRVFTPKIVSQGAEGGAN 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               S   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 175 VFKLSYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 232

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++           L+I
Sbjct: 233 ELGFINDFYEVMQLETDVLRYMFQQVGETCEKELQLLQI 271



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TM      ++  
Sbjct: 302 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTMQNKENSAITD 350

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  +++L +F   G+       +F      F+ 
Sbjct: 351 S---------FDLLYKGLEITSGAQRIHNHDMLLASFKEKGLH----SEKFQSYLDTFRY 397

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++RIV   L   NVRE S FP  
Sbjct: 398 GCPPHGGFGIGLERIVYKFLELTNVREASAFPRD 431


>gi|260171987|ref|ZP_05758399.1| asparaginyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315920299|ref|ZP_07916539.1| asparaginyl-tRNA synthetase [Bacteroides sp. D2]
 gi|313694174|gb|EFS31009.1| asparaginyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 467

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 58/293 (19%), Positives = 111/293 (37%), Gaps = 25/293 (8%)

Query: 1   MHRY-RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L  +D+G+ V + GWV   R    + F+ + D   I  +    D A F
Sbjct: 1   MEKIGRTKIVDLLKRTDIGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNLQVVVDLANF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +          L   G  +S + E + +     ++E+ A++IE+L   +        ++ 
Sbjct: 61  DE-----EMLKLITTGACISVNGEMVESVGSGQKVEVQAREIEVLGTCDNTYPLQ--KKG 113

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           +      +   L  R +T       R  +  ++      + F    TPI+TAS  EGA  
Sbjct: 114 HSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQ 173

Query: 180 FLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRD 222
               + +N              +  F+    +     Q +  L A+     +   P FR 
Sbjct: 174 MFQVTTMNLYDLKKDERGSISYEDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRA 233

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           E+  + R   EF+ ++ E++F +  D ++  E  ++   +   +       FL
Sbjct: 234 ENSNTPRHLAEFWMIEPEVAFNDITDNMDLAEEFIKYCVKWALDNCADDVKFL 286



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 71/228 (31%), Gaps = 37/228 (16%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL-DMQDGDSCFFIAGDPLKFCSFAA 414
           LA  F +      +       K LN +  + +  RL  +   D       D +K    A 
Sbjct: 263 LAEEFIKYCVKWALDNCADDVKFLNDMFDKGLIERLQGVLKDDFVCLPYTDGIKILEEAV 322

Query: 415 D------------ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
                               E  ++  +      + D+P     +E K        F M 
Sbjct: 323 AKGHKFEFPVYWGVDLASEHERFLVEEHFKRPVILTDYP-----KEIK-------AFYMK 370

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           Q         D  +++A    L     EI  G  R      ++     + I  + +    
Sbjct: 371 QNE-------DGKTVRAMDV-LFPKIGEIIGGSEREADYNKLMTRIEEMHIPMKDMW--- 419

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                  + G  PH G   G +R+++ + G  N+R+V  FP +    D
Sbjct: 420 -WYLDTRKFGTCPHSGFGLGFERLLLFVTGMANIRDVIPFPRTPRNAD 466


>gi|303236532|ref|ZP_07323117.1| asparagine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483280|gb|EFL46290.1| asparagine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 463

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 60/290 (20%), Positives = 117/290 (40%), Gaps = 26/290 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE 60
             RT     L  +D G  + + GWV   R    + F+ + D   I   QVV +P+S   E
Sbjct: 1   MKRTKVVDALSCTDFGKDINVRGWVRSHRSSKAVDFIALNDGSTIKNIQVVVDPNSMDAE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             KS+ +   + ++G+++    +   +       E+  ++IEI  +      P+  + + 
Sbjct: 61  TLKSITTGACISVNGVLVESQGKGQTS-------EIQCKEIEIYGLC-PSDYPMQKKGQS 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KY  + LR +T       R  +  ++        F    TP++T S  EGA + 
Sbjct: 113 FEYMR-KYGHMRLRTNTFGAVFRIRHHMAMAIHQYFHEHGFYYFHTPLITGSDAEGAGNM 171

Query: 181 LVPSRVNQG------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
              + ++               F+          Q +  L A+     +   P FR E+ 
Sbjct: 172 FQVTTLDLDRVAKAGEVDYNADFFGKKTHLTVSGQLEGELGATSLGAIYTFGPTFRAENS 231

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + R   EF+ ++ E++F++Q ++++  E+ ++       N       FL
Sbjct: 232 NTPRHLAEFWMVEPEVAFIDQQELMDLEEDFIKYCVRWALNNCKDDLEFL 281



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 56/149 (37%), Gaps = 33/149 (22%)

Query: 439 DFPFYEW----NEEEKKIDFAHNP---------------FTMPQGGM-ESLKGNDLLSIK 478
           +FP  EW    + E ++     +                F M +    ++++G D+    
Sbjct: 324 EFPVSEWGMDLSSEHERYLVEKHFKRPVIMTDYPSQIKSFYMKKNADGKTMQGTDV---- 379

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
                L     EI  G +R    E +L    + G+     E  +       + G  PHGG
Sbjct: 380 -----LFPRIGEIIGGSVREESYEKLLNEIQSRGMK----EEVYDWYLDTRKYGTCPHGG 430

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              G +R+++ + G +N+R+V  F  +  
Sbjct: 431 FGLGFERLILFVTGMQNIRDVIPFARTPK 459


>gi|148653258|ref|YP_001280351.1| lysyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|229559862|sp|A5WFG0|SYK_PSYWF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|148572342|gb|ABQ94401.1| lysyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 510

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 70/331 (21%), Positives = 132/331 (39%), Gaps = 47/331 (14%)

Query: 2   HRYRTHSCGDLGVSDVG---------------SFVRLSGWVHRVRPHGGIIFLDIRDHYG 46
              RT    DL     G               + V ++G V   R      F+ I+D  G
Sbjct: 43  QFKRTDYAEDLQKQFEGITKQEIEENAANGGKTQVSIAGRVMLNRG----AFIVIQDMTG 98

Query: 47  ITQVVA---NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEI 103
             Q+       D     + KS+    ++ + G +  RS +        G + +  ++I +
Sbjct: 99  RIQLYVARKELDEDSLALIKSLDLGDIIGVSGYI-GRSGK--------GDLYVHIEQITL 149

Query: 104 LSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFI 162
           L+ +   P+P           R++ R LDL  +   +N  + R+++I+ +R  M+ E F+
Sbjct: 150 LTKSLR-PMPNKFHGLADTEARYRNRHLDLMTNESSRNTFMIRSQVISGIRKFMLNERFM 208

Query: 163 ECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           E  TP++        AR F+          Y L  AP+ Y + L+  GF+R F+I   FR
Sbjct: 209 EVETPMMHPIPGGAVARPFITHHNALDMPLY-LRIAPELYLKRLVVGGFERVFEINRSFR 267

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-------- 273
           +E   +   P EF  ++   ++ +  D+++  E +   +  +      ++          
Sbjct: 268 NEGVSTRHNP-EFTMIEFYQAYADYKDLMDLTERLFNQLAMDILGTTELTYQEETISLKA 326

Query: 274 -FLRICYDDAIRRY--GTDKPDLRNPIIMHN 301
            F R+   DAI +Y  G D   + +   + +
Sbjct: 327 PFARLSMTDAIAQYAEGFDMSKVADRDYLAD 357



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 7/129 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           +E   E K         T        L + ND       +++L   G EIA+G    +  
Sbjct: 381 FEETAEHKLRQPTF--ITQYPAETSPLARRNDENPEITDRFELFIGGREIANGFSELNDP 438

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F N    K+  ++           A   G+PP  G   GIDR+VML   A ++R
Sbjct: 439 ADQAERFHNQVAEKDAGDDEAMHFDADYIEALAYGLPPTAGEGIGIDRLVMLFTDAASIR 498

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 499 DVILFPHMR 507


>gi|296204889|ref|XP_002749521.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 1
           [Callithrix jacchus]
          Length = 501

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 87/379 (22%), Positives = 150/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL V      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTVQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--------- 117
            E ++ ++G+V  R       +     +EL  QK+ ++S+AE        +         
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKVYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 118 ----REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                   +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F       N       F      LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    + ++ +    ++F +  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 345 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 394

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 395 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 445

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 446 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501


>gi|159898884|ref|YP_001545131.1| asparaginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|226695297|sp|A9AYM5|SYN_HERA2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|159891923|gb|ABX05003.1| asparaginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 447

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 74/289 (25%), Positives = 125/289 (43%), Gaps = 30/289 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEW 69
               VG  V+L+GWV+     G ++F+ +RD     Q V    N     F  AK +  E 
Sbjct: 12  SADHVGEAVKLAGWVYHKTEKGKLVFIQLRDGTATIQCVVFKKNVSEEVFARAKELTQES 71

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G + +    ++         EL    IEI+ + +  P+     +E+      ++R
Sbjct: 72  SCYIHGTLRADERSSL-------GFELDVTDIEIVHLTQNYPITP---KEHGTQFLMEHR 121

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L +R    H  +  R ++I + +  + +E+F+   +PILTA++ EG  D       + G
Sbjct: 122 HLWVRSAKQHALLRIRAQVIAAAQEYLNSEHFVRYDSPILTATAAEGTSDLFATEYFDLG 181

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           + Y L Q  Q Y +  MA+ F R +   P FR E  ++ R   EF+ ++ E +F +QDD 
Sbjct: 182 NAY-LAQTGQLYVESGMAT-FGRVYCFGPTFRAEKSKTRRHLTEFWMIEPEFAFADQDDN 239

Query: 250 LNTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAI 283
           +   EN +  + +   +                      F RI YD+AI
Sbjct: 240 MELQENFVSYIVQRVLDRCEEDLKILERDTSKLENIVPPFPRISYDEAI 288



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 51/149 (34%), Gaps = 21/149 (14%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG--MESLKGNDLL 475
                + G  +       +  D P + +N            F M       E ++  DL+
Sbjct: 311 LEWGDDFGAPHETYLASLF--DKPLFIYN-----YPTKVKAFYMQPAEGRPEVVRCADLI 363

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + + +         EI  G  R H +E++       G+     +          + G  P
Sbjct: 364 APEGYG--------EIIGGSQRIHDAELLEARIREHGLDVADYQ----WYLDLRRYGSVP 411

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           H G   GI+R V  L G +++RE   FP 
Sbjct: 412 HSGFGMGIERCVAWLAGTRHIREAIPFPR 440


>gi|152995161|ref|YP_001339996.1| lysyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|150836085|gb|ABR70061.1| lysyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 500

 Score =  191 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 65/278 (23%), Positives = 121/278 (43%), Gaps = 24/278 (8%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G + R R      F+ ++D  G  Q   N      E+    ++  +  I G+   
Sbjct: 67  KVSIAGRIIRNRG----AFMLLQDMTGQIQAYVNRKVLSPELLADQKTWDLGDIIGI--- 119

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                       G + +   + ++L+ +   PLP          +R++ R++DL  +   
Sbjct: 120 ---SGPVHKSGKGDLYIDMHEAQLLTKSLR-PLPDKHHGLSDMEMRYRQRYVDLIVNEES 175

Query: 140 KNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           +     R++II+++R  +    F+E  TP+L T      AR F+        S Y L  A
Sbjct: 176 RETFQMRSKIISTIRRFLEDRRFMEVETPMLQTIPGGASARPFITHHNAMDMSMY-LRIA 234

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   ++ +  D+++  E++L
Sbjct: 235 PELYLKRLVVGGFERVFEINRNFRNEGTSTRHNP-EFTMIEFYQAYADYKDLMDLTEDML 293

Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           R V E+     TV+           F+R+   D+I  Y
Sbjct: 294 RTVAEKVLGTTTVTYQGSEYDFGAPFVRMSMLDSILHY 331



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 10/155 (6%)

Query: 418 NHIAQELGIINCNCFEF--CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
             +A++L I     +     W      +E    E K+D        P       + ND  
Sbjct: 347 TAVAKKLKIDVKPIWGLGKLWTE---IFE-ETAEHKLDQPTFITEYPAEVSPLARRNDDN 402

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQC 531
                +++    G EIA+G    +  E   + F      K+  ++           A + 
Sbjct: 403 DFITDRFEFFVGGREIANGFSELNDPEDQAERFMRQVAEKDAGDDEAMHYDADYINALEY 462

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP  G   GIDR+VML   A ++R+V LFP  +
Sbjct: 463 GLPPTAGEGIGIDRLVMLFTDAPSIRDVLLFPHMK 497


>gi|30022634|ref|NP_834265.1| asparaginyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206969927|ref|ZP_03230881.1| asparaginyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228923302|ref|ZP_04086590.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228954827|ref|ZP_04116847.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228960827|ref|ZP_04122462.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229048266|ref|ZP_04193834.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229072060|ref|ZP_04205269.1| Asparaginyl-tRNA synthetase [Bacillus cereus F65185]
 gi|229081811|ref|ZP_04214303.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229129842|ref|ZP_04258808.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229147117|ref|ZP_04275476.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229180877|ref|ZP_04308212.1| Asparaginyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|229192759|ref|ZP_04319717.1| Asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|296505034|ref|YP_003666734.1| asparaginyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|38258297|sp|Q817I8|SYN_BACCR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|29898192|gb|AAP11466.1| Asparaginyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206735615|gb|EDZ52783.1| asparaginyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228590598|gb|EEK48459.1| Asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228602434|gb|EEK59920.1| Asparaginyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228636366|gb|EEK92837.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228653533|gb|EEL09405.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228701399|gb|EEL53893.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228710994|gb|EEL62960.1| Asparaginyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228722991|gb|EEL74368.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228798849|gb|EEM45828.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228804816|gb|EEM51415.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228836256|gb|EEM81609.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296326086|gb|ADH09014.1| asparaginyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 463

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 129/376 (34%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWV 70
                   V++SGW+  +R      F+++ D      V    + +   F+    +     
Sbjct: 13  TEKYADQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G V++               E+ A+KI+I  +++    P+  +R   E +R     
Sbjct: 73  VKVEGKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++        F+   TPI+T S  EGA +    +  +   
Sbjct: 124 LRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 LPKGEDGKVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F E  D++N  E++L+   +           F                   
Sbjct: 244 FWMVEPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              RI Y +AI+       D + P+   +   TEH  +    +F + + V    +     
Sbjct: 304 DFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  R+NE
Sbjct: 361 -------KAFYMRLNE 369



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M           D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMR-------LNEDGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|257124941|ref|YP_003163055.1| lysyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257048880|gb|ACV38064.1| lysyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 494

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 65/320 (20%), Positives = 117/320 (36%), Gaps = 22/320 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + +G +   R  G   F  I+D  G  Q     D    E  K  +   +    GL     
Sbjct: 55  KTAGRIVAFRRMGKNGFGQIQDPTGKIQYYVKKDEVGEEQYKIYKKMGLGDFIGL----- 109

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHK 140
            E       TG++ L     E+LS     PLP           R++ R++DL     + +
Sbjct: 110 -EGKLFRTNTGELTLRVDSFEVLSK-NVRPLPEKFHGLTNIETRYRQRYVDLVMNREVME 167

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
            + KR +II   R  +    F E  TP++   +    AR F+          + L  AP+
Sbjct: 168 TMKKRFQIIRFFRSYLEKHGFTEVETPMMHPVAGGATARPFVTHHNALDMELF-LRIAPE 226

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF++ F+I   FR+E       P EF  +++  ++ + +D+++  E+++  
Sbjct: 227 LYLKRLLVGGFEKVFEINRSFRNEGISIKHNP-EFTMMELYQAYADFNDMMDLTEDLISS 285

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           +  E      +      I      RR           + M ++ +     +F   S    
Sbjct: 286 LTFELHGKYEIEYEDKTINMAKPWRR-----------VTMKDIVKETTGFDFDTISSDED 334

Query: 320 VNPGYEVWAIPAKGGGGNRA 339
                +   IP +       
Sbjct: 335 AINKAKEMNIPLEKDKTYTK 354



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPP 535
            +++L  +G E A+     +      + F      +E  ++   G      RA + GMPP
Sbjct: 398 DRFELFISGREFANAYSELNDPRDQKERFEEQVKLREAGDDEAQGMDLDYIRALEYGMPP 457

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG+  GIDR+VML   + ++R+V LFP
Sbjct: 458 AGGLGIGIDRLVMLQTNSASIRDVILFP 485


>gi|229059887|ref|ZP_04197262.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228719432|gb|EEL71035.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 437

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 10  MKRSLTREC----TEHGGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 64

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ I G ++      +        +E+ A ++++L+ AE LP  +  ++  
Sbjct: 65  ---KVDVESVVQIIGEIVETPKTEL-------GVEILAHEVKVLNGAESLPFEINKKKLQ 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 115 VGLDQLLNERVLSLRHERIAAIFKVKSTLVQSFSEFLIENDFTRVFTPKIVSQGAEGGAN 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 175 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 232

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 233 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 271



 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 45/155 (29%), Positives = 64/155 (41%), Gaps = 26/155 (16%)

Query: 413 AADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             D      + LG      +  EF +I  +P             A   +TMP    E++ 
Sbjct: 301 MGDLDTEGEKLLGKYVKETYDSEFVFITHYP-----------KEARPMYTMPNKENEAIT 349

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            +         +DL+  G EI SG  R H  E++L +F   G+       +F      F+
Sbjct: 350 DS---------FDLLYKGLEITSGAQRIHNHEMLLASFKEKGLHP----EKFQSYLDTFR 396

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 397 YGCPPHGGFGIGLERVVYRLLELSNVREASAFPRD 431


>gi|298492161|ref|YP_003722338.1| asparaginyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298234079|gb|ADI65215.1| asparaginyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 463

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 73/355 (20%), Positives = 132/355 (37%), Gaps = 51/355 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY--GITQVVANPDSACFE-IAKSVRSE 68
           L        + + GWV   R   G  FL++ D    G  Q+V N D   +E I K + + 
Sbjct: 10  LRTGQPDESLLIQGWVRTKRELKGFAFLEVNDGSSLGNLQIVINQDLPNYEGILKQINTG 69

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G++++   +         +IEL A  ++I   A+    P+  +R   E +R   
Sbjct: 70  ASVEVSGVLVASQGKG-------QRIELKADVLKIYGDADPETYPLQKKRHSFEFLR-TI 121

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R ++       R     ++       +F+   TPI+TAS  EGA +    + ++ 
Sbjct: 122 AHLRSRTNSFGAVFRVRNACATAIHQFFQERDFLWVHTPIITASDCEGAGELFSVTNLDF 181

Query: 189 G--------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q +  +MA  F   +   P FR E+  + R  
Sbjct: 182 KKIPRTGNQDIDYSQDFFSKPAYLTVSGQLEAEIMAMAFTNVYTFGPTFRAENSNTSRHL 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS-------------------- 271
            EF+ ++ EM+F + +  ++  E  L+ +F+      T                      
Sbjct: 242 AEFWMVEPEMAFCDLEGDMDLAEEFLKYIFKYVLETCTQDMEFFNERIDRTVLETADYII 301

Query: 272 -NNFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
            N F R+ Y DA++           P+       +EH  +   ++F K + V   
Sbjct: 302 SNQFERLSYTDAVKFLEKADVKFDYPVTWGTDLQSEHERYLAEQLFKKPVVVTDY 356



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 50/138 (36%), Gaps = 24/138 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +   + D+P                 F M          +D  +++A    LV    EI 
Sbjct: 349 KPVVVTDYP------------AGIKAFYMR-------LSDDEKTVRAMDI-LVPKIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+ +   + G++ E +           + G  PH G   G +R+V  + G
Sbjct: 389 GGSQREERLDVLEKRVLDQGMNPEDLW----WYLDLRRYGTVPHAGFGLGFERLVQFMTG 444

Query: 553 AKNVREVSLFPMSQNFCD 570
             N+R+V  FP +    +
Sbjct: 445 MGNIRDVIPFPRTPQSAE 462


>gi|269964523|ref|ZP_06178763.1| lysyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269830760|gb|EEZ84979.1| lysyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 505

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 68/305 (22%), Positives = 134/305 (43%), Gaps = 37/305 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIAKSVRSEWVLCIDGLVM 78
           V ++G +   R      FL I++  G  Q  A+        E  + +    ++ + G + 
Sbjct: 68  VAIAGRIMAKRGP----FLVIQETSGRIQAYADKAVQKVLKEKYQGLDIGDIIGVKGALH 123

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                        G + ++ ++ E+L+ A   PLP        + +R++ R++DL  +  
Sbjct: 124 KSGK---------GDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNED 173

Query: 139 HKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
            +   V R+++++++R  MI++ F+E  TP++        AR F+          Y L  
Sbjct: 174 SRQAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMY-LRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +
Sbjct: 233 APELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMDLTEEL 291

Query: 257 LRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKP--------DLRNPIIM 299
           L  V +E     ++            + R+   +AI+ Y  D          DL+N  +M
Sbjct: 292 LSSVAQEVLGSTSMPYGDETVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDLQNRDLM 351

Query: 300 HNVTE 304
            ++ +
Sbjct: 352 VSIAK 356



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 381 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 440

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 441 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 499


>gi|167043278|gb|ABZ07984.1| putative tRNA synthetases class II (D, K and N) [uncultured marine
           crenarchaeote HF4000_ANIW141M12]
          Length = 431

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 80/339 (23%), Positives = 139/339 (41%), Gaps = 29/339 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   D+     G  V L GW+  +R  G + FL +RD  GITQ++   D    +    
Sbjct: 8   RTHYIEDVNADMKGQEVILGGWIEDLRKMGKMTFLTLRDVTGITQIILTDD--VAKSIDG 65

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123
           +  + V+ + G +    A            E+ A +I +LS A   LP+   G  E    
Sbjct: 66  ITRQSVVRVTGKIQDTKARDFAC-------EIKADEINVLSKAVHPLPIDPLGRLESHID 118

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R   R LD+R          R  ++ S+R   + + F E +TP +  S+ EG  +    
Sbjct: 119 NRLNSRALDMRNQKTASIFKIRHHVLASLRKIFLEKKFTEITTPKIIGSASEGGANLFSL 178

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++ A  Q+PQ YK+  M  G +R F+IA  +R E   + R   EF  +D+E +F
Sbjct: 179 DYFGKQAYLA--QSPQLYKEQ-MTIGLERVFEIASFYRAEKSHTGRHLSEFTSVDIEAAF 235

Query: 244 VEQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYGTDKP 291
           ++  D++N +E+++   F+  S                 +  F +I Y   +        
Sbjct: 236 MDYTDVMNILEDLVLNTFKYVSENCKEEQEIIGNKITIPNGPFKKITYSQVLEELNRKDA 295

Query: 292 DLRNPIIMHN----VTEHFVHSEFRVFSKILSVNPGYEV 326
            L     + +    + E      + +    + + P Y +
Sbjct: 296 KLEFGDDLLDSHLRILEENHPGFYFITDWPIKLKPFYIM 334



 Score = 97.4 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 63/162 (38%), Gaps = 29/162 (17%)

Query: 415 DARNHIAQEL-----GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
           DA+     +L      I+  N   F +I D+P                PF + +      
Sbjct: 294 DAKLEFGDDLLDSHLRILEENHPGFYFITDWP------------IKLKPFYIMEKED--- 338

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
                    +  +DL     E++SGG R H  E +    S   +       +F    +AF
Sbjct: 339 -----NPELSESFDLQYGYLELSSGGSRLHNPEKIKIRLSEQNLDP----AKFSEHLQAF 389

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             GMPPH G   G++R++ ++LG  NVREV L+P        
Sbjct: 390 DWGMPPHAGWGLGLERLLTVILGIDNVREVILYPRDPERLKP 431


>gi|161506863|ref|YP_001576817.1| lysyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|160347852|gb|ABX26526.1| Lysyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 511

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 62/301 (20%), Positives = 117/301 (38%), Gaps = 18/301 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +++G +   R  G + F D+ D  G  Q+    D    +  K  +   +    G  +   
Sbjct: 57  KIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDI----GDFLGID 112

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E +     TG++ + A  +  LS A   PLP            ++ R+LDL  +     
Sbjct: 113 GEVM--KTDTGELTIRATHVTFLSKALR-PLPDKYHGLKDVEAIYRQRYLDLITNRDSYM 169

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
               RT+II ++R  +  +NF+E  TP+L        AR F+          Y +  A +
Sbjct: 170 RFVHRTQIIQAIRDYLNKQNFLEVETPVLHNIPGGAEARPFITHHNALDIELY-MRIALE 228

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  E ++R 
Sbjct: 229 LPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDFHDVMDEAEGIIRA 287

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPIIMHNVTEHFVHSEFR 312
             +  S+   ++     I      RR             D   P+ +   T+     +  
Sbjct: 288 AAKVVSDDGKITYQGQDIDLGKPFRRIHMVDLIKEKTGVDFWKPMTLEEATKIAEDHDIH 347

Query: 313 V 313
           V
Sbjct: 348 V 348



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 112/348 (32%), Gaps = 26/348 (7%)

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVL-RGVFEEF-----SNGNTVSNNFLRICYDDA 282
           R        D  M FV +  I+  + + L +  F E       N    +     I + +A
Sbjct: 157 RYLDLITNRDSYMRFVHRTQIIQAIRDYLNKQNFLEVETPVLHNIPGGAEARPFITHHNA 216

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +      +  L  P+    V +     E     +   ++  +       +       F D
Sbjct: 217 LDIELYMRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNPEFTELESYAAYWDFHD 276

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            M+E                + + G +   G             +   +  + G   +  
Sbjct: 277 VMDEAEGIIRAAAKV-----VSDDGKITYQGQDIDLGKPFRRIHMVDLIKEKTGVDFW-- 329

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
              P+            IA++  I     ++   I++  F+E   EE  +D         
Sbjct: 330 --KPMTLEEA-----TKIAEDHDIHVEKFWKVGHIINA-FFEKYCEETIVDPTFVYGHPV 381

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           +    + K  D       ++++   G E  +     +  +     F      +E   +  
Sbjct: 382 EISPLAKKNAD-DPRFTDRFEIYIMGEEYGNAFSELNDPDDQRARFEAQMEEREAGNDEA 440

Query: 523 G----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                   RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 441 DMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 488


>gi|16758642|ref|NP_446251.1| aspartyl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
 gi|135099|sp|P15178|SYDC_RAT RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|203066|gb|AAA40789.1| aspartyl-tRNA synthetase [Rattus norvegicus]
 gi|1773257|gb|AAC52981.1| aspartyl-tRNA synthetase [Rattus norvegicus]
 gi|47938978|gb|AAH72534.1| Dars protein [Rattus norvegicus]
 gi|149058716|gb|EDM09873.1| rCG46287 [Rattus norvegicus]
 gi|161728829|dbj|BAF94235.1| aspartyl-tRNA synthetase [Rattus norvegicus]
 gi|161728850|dbj|BAF94255.1| aspartyl-tRNA synthetase [Rattus norvegicus]
          Length = 501

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 90/379 (23%), Positives = 150/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL V      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTVQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +   PE    
Sbjct: 110 KESIIDVEGIV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EDGRATVNQDTRLDNRIIDLRTSTSQAIFHLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKSNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------LR 276
           F  LD+EM+F        ++I +T+  + +G+ E F       N       F      LR
Sbjct: 286 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    +  + +    ++F V  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF             D  + K +  YD+   G EI SG  R H  +++ +   
Sbjct: 393 KYPLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERAL 443

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           + GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP      
Sbjct: 444 HHGIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRL 499

Query: 570 DL 571
             
Sbjct: 500 TP 501


>gi|282900612|ref|ZP_06308554.1| Asparaginyl-tRNA synthetase, class IIb [Cylindrospermopsis
           raciborskii CS-505]
 gi|281194412|gb|EFA69367.1| Asparaginyl-tRNA synthetase, class IIb [Cylindrospermopsis
           raciborskii CS-505]
          Length = 463

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 77/366 (21%), Positives = 137/366 (37%), Gaps = 53/366 (14%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC 58
           M  +R  +   L  S     + + GWV   R   G  FL+I D   +   Q+V N D   
Sbjct: 1   MIEHRIATI--LRSSQPEETLVVQGWVRTKRELKGFTFLEINDGSCLANLQIVINQDLPH 58

Query: 59  FE-IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           ++ I K + +   + + G++++   +         +IEL A+ +++   A+    P+  +
Sbjct: 59  YQTIIKQINTGASVEVGGVLVASQGKG-------QRIELKAEAVKVYGDADPETYPLQKK 111

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           R   E +R     L  R ++       R     ++        F+   TPILTAS  EGA
Sbjct: 112 RHSFEFLR-SIAHLRSRTNSFGAVFRVRNACATAIHQFFQQRGFMWVHTPILTASDCEGA 170

Query: 178 RDFLVPSRVNQGS--------------FYALPQ---APQQYKQLLMASGFDRYFQIAPCF 220
            +    + +N                 F+  P       Q +  +MA  F   +   P F
Sbjct: 171 GELFSVTSLNLQDIPRKENQDVDYSQDFFGKPTYLTVSGQLEAEIMAMAFTNVYTFGPTF 230

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS--------- 271
           R E+  + R   EF+ ++ EM+F + +  +N  E  L+ +F                   
Sbjct: 231 RAENSHTSRHLAEFWMVEPEMAFCDLEGDMNLAEEFLKHIFRYVMENCEQDMEFFNQRID 290

Query: 272 ------------NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKI 317
                       N F R+ Y DAI+     +     P+   +   +EH  +   ++F K 
Sbjct: 291 NTVLETAENIVNNQFERLSYTDAIQILEKAEVKFDYPVEWGLDLQSEHERYLAEQLFKKP 350

Query: 318 LSVNPG 323
           + V   
Sbjct: 351 VIVTDY 356



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 49/139 (35%), Gaps = 26/139 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +   + D+P                 F M          ND  +++A   D++     EI
Sbjct: 349 KPVIVTDYP------------AQIKAFYMK-------LNNDEKTVRAM--DILAPKIGEI 387

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    +++ +     G+  E +           + G  PH G   G +R+V  + 
Sbjct: 388 IGGSQREERLDILERRILAQGMKPEDLW----WYLDLRRYGTVPHAGFGLGFERLVQFMT 443

Query: 552 GAKNVREVSLFPMSQNFCD 570
           G  N+R+V  FP +    +
Sbjct: 444 GMGNIRDVIPFPRTPQSAE 462


>gi|240849241|ref|NP_001155359.1| aspartyl-tRNA synthetase, cytoplasmic [Ovis aries]
 gi|238799810|gb|ACR55777.1| aspartyl-tRNA synthetase [Ovis aries]
          Length = 501

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 86/381 (22%), Positives = 150/381 (39%), Gaps = 47/381 (12%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKS 64
             DL V   G  V +   VH  R  G   FL +R        +  V  +      + A +
Sbjct: 48  ISDLTVQKAGEVVWVRARVHASRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAAN 107

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE-- 122
           +  E ++ ++G+V  R       +     +EL  QK+ ++S AE        +   PE  
Sbjct: 108 INKESIVDVEGVV--RKVNQKIGSCTQQDVELRVQKVYVISSAEPRLPLQLDDAVRPEVE 165

Query: 123 -----------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
                        R   R +DLR  T       ++ I +  R  +  + F+E  TP + +
Sbjct: 166 GEEEGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLTNKGFVEIQTPKIIS 225

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R  
Sbjct: 226 AASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHL 283

Query: 232 GEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNFL---------- 275
            EF  LD+EM+F        ++I +T+  + +G+ + F +    V+  F           
Sbjct: 284 TEFVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQMVNKQFPCEPFKFLEPT 343

Query: 276 -RICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYE 325
            R+ Y +A+           D+ DL  P    +  + +    ++F +  K  L+V P Y 
Sbjct: 344 LRLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFYT 403

Query: 326 VWAIPAKGGGGNRAFCDRMNE 346
           +          +     R  E
Sbjct: 404 MPDPRNPKQSNSYDMFMRGEE 424



 Score =  100 bits (249), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 345 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYD----TDFYILD------KY 394

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 395 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 445

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 446 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501


>gi|254516796|ref|ZP_05128854.1| asparaginyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219674301|gb|EED30669.1| asparaginyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 465

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 73/386 (18%), Positives = 123/386 (31%), Gaps = 50/386 (12%)

Query: 16  DVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLC 72
           D G  V + GW+   R    GI FL I D       Q V   D   +E      SE +  
Sbjct: 16  DTGGEVAVRGWLRSKRDSKAGISFLAIHDGSSFDAIQAVVPADLDNYE------SEVLQL 69

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +      + +     Q+E+ A ++ +L   E+       ++ +          L 
Sbjct: 70  TTGCSVELRGTLVPSQGKGQQVEIQASELRVLGWVEDPETYPVAKKRHTFEYLRTQAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R +T       R  + N++        F   +TPI+T S  EGA +    S ++     
Sbjct: 130 PRTNTFGAITRVRHCLANAIHSYFHDNGFYWVNTPIITGSDCEGAGELFRVSTLDMNNIP 189

Query: 190 -----------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+   A      Q           + +   P FR E+  + R   EF+
Sbjct: 190 RAADGSVDYGQDFFGGDAYLTVSGQLAVESYCLSMSKVYTFGPTFRAENSNTSRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNF 274
            ++ E++F +  D  +  E++L+ VF    N                        V  NF
Sbjct: 250 MIEPEVAFADLADNADLAESLLKHVFGRVLNECEDDLAFFNQRIDDTVLTRLAAMVDQNF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
            R+ Y +AI+           P+      +     E  +  + +   P   +        
Sbjct: 310 ERMDYSEAIKILKASGQKFEFPVEWG--VDLASEHERYLCEQHVG-RPVVLMNYPREIKA 366

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIF 360
              R   D     A     PG+  I 
Sbjct: 367 FYMRLNDDEKTVAAMDVLAPGIGEII 392



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 68/189 (35%), Gaps = 20/189 (10%)

Query: 391 LDMQDGDSCFFIAGDPLKFCSFAADA------RNHIAQELGIINCNCFEFCWIMDFPFYE 444
           L+  + D  FF         +  A        R   ++ + I+  +  +F + +++    
Sbjct: 279 LNECEDDLAFFNQRIDDTVLTRLAAMVDQNFERMDYSEAIKILKASGQKFEFPVEWGVDL 338

Query: 445 WNEEEKKIDFAH--NPFTMPQGGME----SLKGNDLLSIKAFQYDLVCNGF-EIASGGIR 497
            +E E+ +   H   P  +     E     ++ ND     A   D++  G  EI  G  R
Sbjct: 339 ASEHERYLCEQHVGRPVVLMNYPREIKAFYMRLNDDEKTVA-AMDVLAPGIGEIIGGSQR 397

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               +V+             + +         + G  PH G   G +R++  + G +NVR
Sbjct: 398 EERLDVLDARM------DPQLRDELWWYRDLRRYGTVPHAGFGLGFERLINYVTGMENVR 451

Query: 558 EVSLFPMSQ 566
           +   FP + 
Sbjct: 452 DAIPFPRTP 460


>gi|29376869|ref|NP_816023.1| asparaginyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227519904|ref|ZP_03949953.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227553908|ref|ZP_03983955.1| asparaginyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|257084665|ref|ZP_05579026.1| asparaginyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|307270869|ref|ZP_07552156.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307271487|ref|ZP_07552759.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307285841|ref|ZP_07565975.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307287739|ref|ZP_07567782.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|312903710|ref|ZP_07762884.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|38258305|sp|Q831X4|SYN_ENTFA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|29344334|gb|AAO82093.1| asparaginyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227072698|gb|EEI10661.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227176967|gb|EEI57939.1| asparaginyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|256992695|gb|EEU79997.1| asparaginyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|306501477|gb|EFM70780.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306502602|gb|EFM71869.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306511759|gb|EFM80757.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306512782|gb|EFM81427.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310632902|gb|EFQ16185.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315025447|gb|EFT37379.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315032867|gb|EFT44799.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315146020|gb|EFT90036.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315150177|gb|EFT94193.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315161738|gb|EFU05755.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315164838|gb|EFU08855.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315173639|gb|EFU17656.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315574391|gb|EFU86582.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315578688|gb|EFU90879.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|315580135|gb|EFU92326.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 450

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 76/352 (21%), Positives = 132/352 (37%), Gaps = 45/352 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEI 61
               VG  V++  W+   R  G I FL +RD       VV  P+          +  F+ 
Sbjct: 15  SNKHVGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQE 74

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K +  E  + + G++   S             E+    +E++  +E+ P+     +E+ 
Sbjct: 75  IKHLSQETAVMVTGVIKEDSRSKF-------GYEMDITDLEVVGASEDYPITP---KEHG 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +  
Sbjct: 125 TDFLMDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELF 184

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 Q +F  L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 185 ETDYFGQPAF--LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRR 285
           ++   ++ L+  E  ++ + +                           F RI YDDAI  
Sbjct: 242 AYTTHEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIEL 301

Query: 286 YG-----TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
                   D   +       +  E F+ + + V + IL+     + + +   
Sbjct: 302 LQKEEANNDYDHIEWGEDFGSPHETFISNYYGVPTFILNYPKAIKAFYMKPH 353



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF-------QYDLVC----- 486
           D+   EW E+       H  F     G+ +   N   +IKAF       + D+V      
Sbjct: 310 DYDHIEWGEDFG---SPHETFISNYYGVPTFILNYPKAIKAFYMKPHPTREDVVICADLI 366

Query: 487 ---NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
                 EI  G  R    + + +  +  G+S    E  +       + G  PH G   G+
Sbjct: 367 APEGYGEIIGGSERATDYDYLKEKVAEFGLS----EEEYSWYLDLRKYGSVPHSGFGLGL 422

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R V  + G +++RE   FP  
Sbjct: 423 ERAVTFITGNEHIREAIPFPRM 444


>gi|315155305|gb|EFT99321.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0043]
          Length = 450

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 76/352 (21%), Positives = 132/352 (37%), Gaps = 45/352 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEI 61
               VG  V++  W+   R  G I FL +RD       VV  P+          +  F+ 
Sbjct: 15  SNKHVGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEETGTEKFQE 74

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K +  E  + + G++   S             E+    +E++  +E+ P+     +E+ 
Sbjct: 75  IKHLSQETAVMVTGVIKEDSRSKF-------GYEMDITDLEVVGASEDYPITP---KEHG 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +  
Sbjct: 125 TDFLMDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELF 184

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 Q +F  L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 185 ETDYFGQPAF--LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRR 285
           ++   ++ L+  E  ++ + +                           F RI YDDAI  
Sbjct: 242 AYTTHEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIEL 301

Query: 286 YG-----TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
                   D   +       +  E F+ + + V + IL+     + + +   
Sbjct: 302 LQKEEANNDYDHIEWGEDFGSPHETFISNYYGVPTFILNYPKAIKAFYMKPH 353



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF-------QYDLVC----- 486
           D+   EW E+       H  F     G+ +   N   +IKAF       + D+V      
Sbjct: 310 DYDHIEWGEDFG---SPHETFISNYYGVPTFILNYPKAIKAFYMKPHPTREDVVICADLI 366

Query: 487 ---NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
                 EI  G  R    + + +  +  G+S    E  +       + G  PH G   G+
Sbjct: 367 APEGYGEIIGGSERATDYDYLKEKVAEFGLS----EEEYSWYLDLRKYGSVPHSGFGLGL 422

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R V  + G +++RE   FP  
Sbjct: 423 ERAVTFITGNEHIREAIPFPRM 444


>gi|313672325|ref|YP_004050436.1| lysyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939081|gb|ADR18273.1| lysyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 490

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 58/266 (21%), Positives = 108/266 (40%), Gaps = 11/266 (4%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +  +R  G   F  I+D  G  Q+    D        S  +  V    G+   
Sbjct: 51  KVTVAGRILSMRHFGKATFATIKDRTGSIQIYIKRDDLTDVEKISFDNTDVGDFIGI--- 107

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                      TG++ + A+  +IL+ A    LP          IR + R++DL  +   
Sbjct: 108 ---SGFLFKTKTGELTIYAETFKILTKALR-DLPEKWHGLKDIEIRQRQRYVDLIVNPEV 163

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQA 197
           K + K R+ II  +R     ++F+E  TP++   +    A+ F+          Y L  A
Sbjct: 164 KEVFKKRSLIIKHIRDFFYNKDFLEVETPMMHPIAGGATAKPFITHHNTLDMKLY-LRIA 222

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   ++ +  D++   E ++
Sbjct: 223 PELYLKRLVVGGFERVFEINRNFRNEGISTKHNP-EFTMIEWYQAYADYFDLMKMTEELI 281

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAI 283
             +  + +    ++     I      
Sbjct: 282 YEIALKINGTPIITFGDYEINLTPPW 307



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 6/147 (4%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A+EL I   + +    I+    +E   E+K I          +    S    D   I   
Sbjct: 337 AKELNIKVEDGWGRGKIV-LTIFETLVEDKLIQPTFIIDYPKEVSPLSKSKKDNPEI-TE 394

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L   G E+A+G    +      + F     +KE  +           RA + G+PP 
Sbjct: 395 RFELFIAGMEVANGFNELNDPIDQYERFEKQVKAKEAGDEEAHMMDKDYIRALEYGLPPT 454

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   G+DR+VMLL   K++REV LFP
Sbjct: 455 AGEGLGVDRLVMLLTDTKSIREVILFP 481


>gi|229549454|ref|ZP_04438179.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|307277213|ref|ZP_07558317.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|312899799|ref|ZP_07759118.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312953411|ref|ZP_07772251.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|229305691|gb|EEN71687.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|295113406|emb|CBL32043.1| asparaginyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|306506143|gb|EFM75309.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|310628620|gb|EFQ11903.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|311293049|gb|EFQ71605.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315035647|gb|EFT47579.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315146653|gb|EFT90669.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315152079|gb|EFT96095.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315159117|gb|EFU03134.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315170326|gb|EFU14343.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|327535658|gb|AEA94492.1| asparagine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 450

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 76/352 (21%), Positives = 132/352 (37%), Gaps = 45/352 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEI 61
               VG  V++  W+   R  G I FL +RD       VV  P+          +  F+ 
Sbjct: 15  SNKHVGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQQ 74

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K +  E  + + G++   S             E+    +E++  +E+ P+     +E+ 
Sbjct: 75  IKHLSQETAVMVTGVIKEDSRSKF-------GYEMDITDLEVVGASEDYPITP---KEHG 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +  
Sbjct: 125 TDFLMDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELF 184

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 Q +F  L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 185 ETDYFGQPAF--LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRR 285
           ++   ++ L+  E  ++ + +                           F RI YDDAI  
Sbjct: 242 AYTTHEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIEL 301

Query: 286 YG-----TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
                   D   +       +  E F+ + + V + IL+     + + +   
Sbjct: 302 LQKEEANNDYDHIEWGEDFGSPHETFISNYYGVPTFILNYPKAIKAFYMKPH 353



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF-------QYDLVC----- 486
           D+   EW E+       H  F     G+ +   N   +IKAF       + D+V      
Sbjct: 310 DYDHIEWGEDFG---SPHETFISNYYGVPTFILNYPKAIKAFYMKPHPTREDVVICADLI 366

Query: 487 ---NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
                 EI  G  R    + + +  +  G+S    E  +       + G  PH G   G+
Sbjct: 367 APEGYGEIIGGSERATDYDYLKEKVAEFGLS----EEEYSWYLDLRKYGSVPHSGFGLGL 422

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R V  + G +++RE   FP  
Sbjct: 423 ERAVTFITGNEHIREAIPFPRM 444


>gi|145589653|ref|YP_001156250.1| lysyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189082962|sp|A4SYX2|SYK_POLSQ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|145048059|gb|ABP34686.1| lysyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 514

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 64/309 (20%), Positives = 125/309 (40%), Gaps = 22/309 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y + +  +L    +   V+++G +   R  G   F  I+D  G  Q   N + +  +   
Sbjct: 54  YDSLTKEELAAKKI--HVKVAGRMVLKRVMGKASFATIQDRSGQIQFYINDEISGADTHG 111

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           + +   +          SAE        G++ +    + +LS +   PLP          
Sbjct: 112 AFKHWDMGD------FISAEGNLFKTNKGELSVECSNLRLLSKSLR-PLPDKFHGLSDLE 164

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            +++ R++DL  +   +N  K R+  I S+R  M+  +F+E  TP+L        A+ F+
Sbjct: 165 TKYRQRYVDLIVNPESRNTFKARSNAIASLRRHMLDADFMEVETPMLHPIPGGATAKPFI 224

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     + L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   
Sbjct: 225 THHNALDMQMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGV-SPRHNPEFTMMEFYA 282

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRYGTDKPD 292
           ++ +   +++  E ++R    +               +S  F R+  ++AI +Y      
Sbjct: 283 AYTDYRWLMDFTEGLIRAAAVDAQGTAVLTHQGRELDLSKPFQRLTINEAILKYCAQSGK 342

Query: 293 LRNPIIMHN 301
               I + +
Sbjct: 343 SYEAIQLDD 351



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E    +  +      +    + + +D       +++L   G EIA+G    + +
Sbjct: 383 LFELVAESHLWEPTYIIDYPIEVSPLA-RESDTRPGITERFELFITGREIANGFSELNDA 441

Query: 502 EVMLQAFSNVGISKEVVEN---RFGG-LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      KE  +     F     RA + GMPP GG   GIDR+VMLL  A N+R
Sbjct: 442 EDQANRFRKQVEQKEAGDEEAMYFDHDFIRALEYGMPPTGGCGIGIDRLVMLLTDAPNIR 501

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 502 DVILFP 507


>gi|53133416|emb|CAG32037.1| hypothetical protein RCJMB04_16g4 [Gallus gallus]
          Length = 503

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 150/381 (39%), Gaps = 47/381 (12%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKS 64
             DL        V + G VH  R  G   FL +R        +  V  +      + A +
Sbjct: 50  IKDLTEEKADEVVWVRGRVHTSRAKGKQCFLVLRQQQFNIQALVAVGQHASKQMVKFAAN 109

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE-- 122
           +  E ++ ++G+V  R A           +EL  Q+I ++S+AE        +   PE  
Sbjct: 110 INKESIVDVEGVV--RKAHQKIGGCTQQDVELHVQRIYVISLAEPRLPLQLDDAVRPEVE 167

Query: 123 -----------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
                        R   R +DLR  T       ++ I    R  +I + F+E  TP + +
Sbjct: 168 GEEDGRATVNQDTRLDNRVIDLRTSTSQAVFCLQSGICQLFRETLIRKGFVEIQTPKIIS 227

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F + P FR ED  + R  
Sbjct: 228 AASEGGANVFTVSYFKSSAYLA--QSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHL 285

Query: 232 GEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNFL---------- 275
            EF  LD+EM+F        D+I +T+  + +G+ E F +    V+  F           
Sbjct: 286 TEFVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQAEIQMVNKQFPCEPFKFLEPT 345

Query: 276 -RICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYE 325
            R+ Y +A+           D+ DL  P    +  + +    ++F +  K  L+V P Y 
Sbjct: 346 LRLEYREAVAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFYT 405

Query: 326 VWAIPAKGGGGNRAFCDRMNE 346
           +          +     R  E
Sbjct: 406 MPDPVNPKNSNSYDMFMRGEE 426



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF              +    +  YD+   G EI SG  R H  +++ +   +
Sbjct: 395 KYPLAVRPFYTMPD--------PVNPKNSNSYDMFMRGEEILSGAQRIHDPQLLTERAKH 446

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP       
Sbjct: 447 HGIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRDPKRLT 502

Query: 571 L 571
            
Sbjct: 503 P 503


>gi|330718514|ref|ZP_08313114.1| lysyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 494

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 85/392 (21%), Positives = 151/392 (38%), Gaps = 43/392 (10%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT    +L           + + G  V ++G +   R  G IIF DIRD  G  Q+ A  
Sbjct: 36  RTAKAQELHDKYDDTSLETLENNGQEVIIAGRMIAKRGAGKIIFADIRDVSGKIQIYAKR 95

Query: 55  DS--ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           D     + I K       L I G VM   A         G++ +   ++  L+ A   P+
Sbjct: 96  DELGENYTIIKRSDLGDFLGIKGKVMKTEA---------GELTVFVTELTHLTKALR-PM 145

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-T 170
           P           R++ R+LDL  +       + R+RII+++R  M +  F+E  TPIL T
Sbjct: 146 PDKFHGIADVETRYRKRYLDLIANEDSFKKFQQRSRIISAIRDYMDSNEFLEVETPILQT 205

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +    AR F+          Y +  A + Y + L+  G +R +++   FR+E       
Sbjct: 206 EAGGAAARPFITHHNALNIDMY-MRIATELYLKRLVVGGMERVYEMGRIFRNEGMDPKHN 264

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  ++   ++ +  D++N  E + +   +  S+             D  I   GTD 
Sbjct: 265 P-EFTTMESYAAYWDFTDVMNETEGIFKAAAKVVSD-------------DLTINYQGTD- 309

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
            +L  P    ++ +         F + +S+    ++                 +NE+  +
Sbjct: 310 INLAKPFARQHMVDLIKTYTGVDFWEEMSIEQARQLADEHHVTYEAYWQVGHIINEFFET 369

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
             +  L    +     G+   + P+AK  +  
Sbjct: 370 FVEEKLIEPTFVY---GHPVEVSPLAKKNSDD 398



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I+         +    + K +D       +++L   G E A+     +  
Sbjct: 366 FFETFVEEKLIEPTFVYGHPVEVSPLAKKNSD-DPRFTDRFELFIVGSEYANAFTELNDP 424

Query: 502 EVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F      +E      E+       A + GMPP GG+  GIDR++MLL  +  +R
Sbjct: 425 IDQRARFEAQVAERENGNDEAESIDEDFIEALEYGMPPTGGLGVGIDRLIMLLTNSDTIR 484

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 485 DVVLFPTMR 493


>gi|293383609|ref|ZP_06629519.1| asparagine--tRNA ligase [Enterococcus faecalis R712]
 gi|293387278|ref|ZP_06631835.1| asparagine--tRNA ligase [Enterococcus faecalis S613]
 gi|312906159|ref|ZP_07765171.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312909504|ref|ZP_07768359.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|291079121|gb|EFE16485.1| asparagine--tRNA ligase [Enterococcus faecalis R712]
 gi|291083315|gb|EFE20278.1| asparagine--tRNA ligase [Enterococcus faecalis S613]
 gi|310627805|gb|EFQ11088.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311290177|gb|EFQ68733.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
          Length = 450

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 76/352 (21%), Positives = 132/352 (37%), Gaps = 45/352 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEI 61
               VG  V++  W+   R  G I FL +RD       VV  P+          +  F+ 
Sbjct: 15  SNKHVGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEVFGEEAGTEKFQE 74

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K +  E  + + G++   S             E+    +E++  +E+ P+     +E+ 
Sbjct: 75  IKHLSQETAVMVTGVIKEDSRSKF-------GYEMDITDLEVVGASEDYPITP---KEHG 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +  
Sbjct: 125 TDFLMDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELF 184

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 Q +F  L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 185 ETDYFGQPAF--LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRR 285
           ++   ++ L+  E  ++ + +                           F RI YDDAI  
Sbjct: 242 AYTTHEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIEL 301

Query: 286 YG-----TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
                   D   +       +  E F+ + + V + IL+     + + +   
Sbjct: 302 LQKEEANNDYDHIEWGEDFGSPHETFISNYYGVPTFILNYPKAIKAFYMKPH 353



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF-------QYDLVC----- 486
           D+   EW E+       H  F     G+ +   N   +IKAF       + D+V      
Sbjct: 310 DYDHIEWGEDFG---SPHETFISNYYGVPTFILNYPKAIKAFYMKPHPTREDVVICADLI 366

Query: 487 ---NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
                 EI  G  R    + + +  +  G+S    E  +       + G  PH G   G+
Sbjct: 367 APEGYGEIIGGSERATDYDYLKEKVAEFGLS----EEEYSWYLDLRKYGSVPHSGFGLGL 422

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R V  + G +++RE   FP  
Sbjct: 423 ERAVTFITGNEHIREAIPFPRM 444


>gi|169351684|ref|ZP_02868622.1| hypothetical protein CLOSPI_02465 [Clostridium spiroforme DSM 1552]
 gi|169291906|gb|EDS74039.1| hypothetical protein CLOSPI_02465 [Clostridium spiroforme DSM 1552]
          Length = 496

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 65/304 (21%), Positives = 121/304 (39%), Gaps = 22/304 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +L+G +   R  G + F+ I+D  G  Q+    D+   ++ + V+   +    G ++   
Sbjct: 61  KLAGRIMTKRRKGKVCFMHIQDREGQIQLYVRKDAIGEDVYELVKKGDI----GDIIGVK 116

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHK 140
                 N  TG+  +  ++   L+ A   PLP           R++ R++DL  +    K
Sbjct: 117 GTVFMTN--TGECSVKVEEYTHLTKALR-PLPEKYHGLTDVEERYRRRYVDLIMNEDARK 173

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQ 199
               R +II S++  +  + ++E  TP+L        AR F+        +FY L  A +
Sbjct: 174 IAFTRPKIIRSIQHYLDNKGYVEVETPVLNPILGGASARPFVTHHNTLDVNFY-LRIATE 232

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+  G D  ++I   FR+E       P EF  +++  +F + + +++  E ++  
Sbjct: 233 LSLKRLIVGGMDAVYEIGRLFRNEGMDRTHNP-EFTTIEVYKAFSDLEGMMDLTEGIISN 291

Query: 260 VFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKP-DLRNPIIMHNVTEHFVH 308
              E      +            F RI   DAI+   G D   D+          EH + 
Sbjct: 292 AANEVCGTYEIEYKGHKISLAPGFKRISMTDAIKEKTGIDFAGDMTFEDAKKLAEEHHIE 351

Query: 309 SEFR 312
            E  
Sbjct: 352 IEPH 355



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 6/152 (3%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A+E  I     +E+  I++  F ++ EE   I      +  P       + N      
Sbjct: 343 KLAEEHHIEIEPHYEYGHIINEFFEKYVEET--IVDPTFVYGHPVEISPLARKNPEDPRF 400

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMP 534
             +++L   G E A+     +  +   + F+N    KE               A + G+P
Sbjct: 401 TQRFELFICGNEYANAFNELNDPDDQYERFANQLKEKELGNDEANEMDLDYVEALEYGLP 460

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P GG+  GIDR+VMLL G ++++EV LFP  +
Sbjct: 461 PTGGMGMGIDRLVMLLTGQESIQEVILFPQMK 492


>gi|312074257|ref|XP_003139889.1| DRS-2 protein [Loa loa]
 gi|307764948|gb|EFO24182.1| DRS-2 protein [Loa loa]
          Length = 218

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 87/196 (44%), Gaps = 10/196 (5%)

Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
           + GD           R+ + + + +      EF WI  FP +  N E  ++  AH+PFT 
Sbjct: 1   MWGDDAGVKWTLGQLRHLVGEAMHLRAEQRMEFVWITHFPLFSVNAE-GRLQSAHHPFTA 59

Query: 462 PQGGMESLKGND--LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
           P      L  +   LLSI    YDLV NG E+  G IR H  +V     S +        
Sbjct: 60  PIPDDMPLLYDPNKLLSITGQHYDLVLNGVELGGGSIRIHNEDVQRHVLSTILGEPSE-- 117

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN----VREVSLFPMSQNFCDLLMGS 575
                + +A   G PPHGG A G+DR V LL+G  +    +R+V  FP S+   DL+   
Sbjct: 118 -ELEHMLKALSYGAPPHGGFAIGLDRYVALLVGRGDSSVPIRDVIAFPKSKEGNDLMTRC 176

Query: 576 PSTVSVEQLRELGLRI 591
           P   +  QL   G+ +
Sbjct: 177 PVETTSSQLSRYGISL 192


>gi|288801458|ref|ZP_06406911.1| asparagine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331669|gb|EFC70154.1| asparagine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 467

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 57/295 (19%), Positives = 115/295 (38%), Gaps = 29/295 (9%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L  +D G+ V + GWV   R    + F+ + D   I  +    D   F
Sbjct: 1   MEKIKRTKVAEALKRTDFGATVNVKGWVRTHRSSKAVDFIALYDGSTINSIQIVIDPTAF 60

Query: 60  E--IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           +  + K + +   + + G ++       N       +E+  + IEI  +      P+  +
Sbjct: 61  DESLLKQITTGSCISVVGELVESQGSGQN-------VEILGKSIEIYGLCGSDY-PMQKK 112

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            +  E +R ++  L LR ++    +  R  +  ++        F    TPI+TAS  EGA
Sbjct: 113 GQTFEYMR-QHAHLRLRTNSFGAVMRIRHNMAIAIHQYFHEHGFYYFHTPIITASDAEGA 171

Query: 178 RDFLVPSRVNQ--------------GSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
            +    +  N                 F+    +     Q +  L A+   + +   P F
Sbjct: 172 GEMFQVTTKNLYDLKKDDEGHITYNDDFFGKMTSLTVSGQLEGELGATALGQIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F++ +++++  E+ ++               FL
Sbjct: 232 RAENSNTPRHLAEFWMIEPEVAFIDLNELMDLEEDFIKHCVRWALEHCKEDLEFL 286



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 4/87 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L     EI  G +R    + ++      GI  + +           + G  PHGG   G 
Sbjct: 384 LFPQIGEIIGGSVREESYDKLVNEIETRGIPMKDMW----WYLDTRKYGSCPHGGFGLGF 439

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +R+++ + G +N+R+V  FP +    +
Sbjct: 440 ERLILFVTGMQNIRDVIPFPRTPKSAE 466


>gi|259046851|ref|ZP_05737252.1| asparagine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036474|gb|EEW37729.1| asparagine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 433

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 80/354 (22%), Positives = 143/354 (40%), Gaps = 39/354 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDH---YGITQVVANPDSACFEIAKSVRSEWVLCI 73
           VG  V++  WV   R  G I FL +RD    +    V A+ +   FE+AK +  E  + +
Sbjct: 8   VGQTVKIGAWVTNKRSSGKIAFLQLRDGKAYFQGIVVKADVNEETFELAKGLTQESSVFV 67

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V   +   +         EL  + IE++  + E P+     +E+       +R L L
Sbjct: 68  TGVVQEDTRSKL-------GYELLVKDIELIGESHEYPITP---KEHGTDFLMDHRHLWL 117

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +         FI+  +PIL+ ++ E + +        + +F  
Sbjct: 118 RSTKQHAIMEIRNAIIYASYEFFDKNGFIKFDSPILSGNAAEDSTELFETDYFGEPAF-- 175

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F R F   P FR E  ++ R   EF+ +D E  ++  D+ L+  
Sbjct: 176 LTQSGQLYLE-AGAMAFGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYLYLTHDESLDLQ 234

Query: 254 ENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYG-------TDK 290
           E  ++ + +   +                   +S  F RI YD+AI           TD 
Sbjct: 235 EAYVKALIQGVLDRAPHALETLERDTELLKKYISEAFKRITYDEAIDLLQAHENDEDTDY 294

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
             L +     +  E ++ + F V + +++     + + +    G  +R  C  +
Sbjct: 295 EHLEHGDDFGSPHETWISNHFGVPTFVINYPTEIKAFYMKPVPGNESRVLCADL 348



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G  R    + +L    + G++     + +       + G  PH G   G++R+V  
Sbjct: 356 EVIGGSERETDYDKLLDRIKSNGLNP----DDYAFYLDLRKFGSVPHSGFGLGLERMVTF 411

Query: 550 LLGAKNVREVSLFPM 564
           + G K++RE   FP 
Sbjct: 412 VAGTKHIREAIPFPR 426


>gi|229087105|ref|ZP_04219255.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696173|gb|EEL49008.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 463

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 63/357 (17%), Positives = 122/357 (34%), Gaps = 51/357 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWV 70
                   V++SGW+  +R      F+++ D      V    + +   F+    +     
Sbjct: 13  TEKYADQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G V++               E+ A+KI+I  +++    P+  +R   E +R     
Sbjct: 73  VKVEGKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++        F+   TPI+T S  EGA +    +  +   
Sbjct: 124 LRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 VPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F E  D++N  E++L+   +           F                   
Sbjct: 244 FWMVEPEIAFAELGDVMNLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
              RI Y +AI+       D + P+   +   TEH  +    +F + + V    +  
Sbjct: 304 DFGRITYTEAIKVLQESDADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI 360



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 26/139 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              ++ D+P        K I      F M          +D  ++ A   DL+  G  E+
Sbjct: 349 RPVFVTDYP--------KDIKA----FYMR-------LNDDGKTVAAT--DLLVPGIGEL 387

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    +V++     +G++    E  +       + G   H G   G +R +M + 
Sbjct: 388 IGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERFLMYIT 443

Query: 552 GAKNVREVSLFPMSQNFCD 570
           G  N+R+V  FP +    +
Sbjct: 444 GMANIRDVIPFPRTPGSSE 462


>gi|226945981|ref|YP_002801054.1| lysyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|226720908|gb|ACO80079.1| lysyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 500

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 68/314 (21%), Positives = 126/314 (40%), Gaps = 36/314 (11%)

Query: 5   RTHSCGDLGV--SDVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    ++ G          V+++G +   R      F+ I+D  G  QV  + 
Sbjct: 42  RDSYCADLQKRYAEAGKEELEAAAIPVKVAGRIMLNRG----AFMVIQDMTGRIQVYVDR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                E  ++V+   +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KGLPAETLEAVKHWDLGDI------IAAEGTLARSGKGDLYVHMSTVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                     R++ R++DL  +   ++  + R++II  +R  +   +F+E  TP+L    
Sbjct: 151 KHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRSQIIAHIRRFLAERDFLEVETPMLQVIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   P 
Sbjct: 211 GGAAAKPFQTHHNALDLPMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAI 283
           EF  L+   ++ + +D ++  E + R + +                    F R+   D+I
Sbjct: 269 EFTMLEFYQAYADYEDNMDLTEQLFRELAQLVLGTTDVPYQGKVFHFGEPFARLSVFDSI 328

Query: 284 RRYGTDK--PDLRN 295
             Y  +    DLR+
Sbjct: 329 LYYNPEVSAADLRD 342



 Score = 97.4 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E +++        P       + +D       +++L   G EIA+     + +E   + F
Sbjct: 376 EHRLEQPTFITRYPFEVSPLARRSDDDPSVTDRFELFIGGREIANAYSELNDAEDQAERF 435

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 K+  ++          RA + GMPP  G   GIDR+VMLL  + ++R+V LFP 
Sbjct: 436 MQQVRDKDAGDDEAMHFDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPH 495

Query: 565 SQ 566
            +
Sbjct: 496 MR 497


>gi|256853714|ref|ZP_05559079.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256710657|gb|EEU25700.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T8]
          Length = 444

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 76/352 (21%), Positives = 132/352 (37%), Gaps = 45/352 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEI 61
               VG  V++  W+   R  G I FL +RD       VV  P+          +  F+ 
Sbjct: 9   SNKHVGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQE 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K +  E  + + G++   S             E+    +E++  +E+ P+     +E+ 
Sbjct: 69  IKHLSQETSVMVTGVIKEDSRSKF-------GYEMDITDLEVVGASEDYPITP---KEHG 118

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +  
Sbjct: 119 TDFLMDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELF 178

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 Q +F  L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 179 ETDYFGQPAF--LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEM 235

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRR 285
           ++   ++ L+  E  ++ + +                           F RI YDDAI  
Sbjct: 236 AYTTHEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVLEPFKRITYDDAIEL 295

Query: 286 YG-----TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
                   D   +       +  E F+ + + V + IL+     + + +   
Sbjct: 296 LQKEEANNDYDHIEWGEDFGSPHETFISNYYGVPTFILNYPKAIKAFYMKPH 347



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF-------QYDLVC----- 486
           D+   EW E+       H  F     G+ +   N   +IKAF       + D+V      
Sbjct: 304 DYDHIEWGEDFG---SPHETFISNYYGVPTFILNYPKAIKAFYMKPHPTREDVVICADLI 360

Query: 487 ---NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
                 EI  G  R    + + +  +  G+S    E  +       + G  PH G   G+
Sbjct: 361 APEGYGEIIGGSERATDYDYLKEKVAEFGLS----EEEYSWYLDLRKYGSVPHSGFGLGL 416

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R V  + G +++RE   FP  
Sbjct: 417 ERAVTFITGNEHIREAIPFPRM 438


>gi|307299320|ref|ZP_07579121.1| asparaginyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915116|gb|EFN45502.1| asparaginyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 432

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 70/303 (23%), Positives = 120/303 (39%), Gaps = 29/303 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVL 71
             +   V++ GW+ R R  G I FL +RD  G  Q +        + F++A S++ E  L
Sbjct: 11  KHINEHVQIRGWLRRKRSSGKIQFLFLRDGSGFVQAIVEKSSVPESVFQVAASLKMESSL 70

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + GLV +            G +E+  + +EIL + E+         ++        R L
Sbjct: 71  IVTGLVKAEER-------APGGVEVLVEDVEILQIPEKDFPINKP--DHSIDFLMDNRHL 121

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR       +  R  II ++R       F+   TPI T S  E A +       + G  
Sbjct: 122 WLRTQRQTHVLKIRHEIIRAVREFYNDRGFVLVDTPIFTGSIGESAGNTFEIDYFDYGKA 181

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L Q  Q Y +   A    + + + P FR E  ++ R   EF+  + E+++   DD + 
Sbjct: 182 Y-LAQTGQLYLEAA-AMALGKVYNLGPTFRAEKSKTRRHLIEFWMNEAEVAYYGHDDNIK 239

Query: 252 TMENVLRGVFEEFSNG---------------NTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
             E+++  V ++                     +   F RI YD+AI+       D++  
Sbjct: 240 LQEDLVTYVVKKTLERAGEYLRSVGRDTSRLEKIETPFPRITYDEAIKLLVKKGFDIKWG 299

Query: 297 IIM 299
             +
Sbjct: 300 DDI 302



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 14/125 (11%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGG--MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           +E     ++       F M       E +  +D+L+ + +         EI     R H 
Sbjct: 314 FEKPVVVERYPRMMKAFYMQPDPERPEVVLCDDMLAPEGYG--------EIIGASERIHD 365

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            +++++     G+        +         G  PH G   GI+RIV  + G +++RE  
Sbjct: 366 RDLLVERIQEYGLDV----ESYDWYLDLRDYGTVPHSGFGMGIERIVAWIAGLEHIREAI 421

Query: 561 LFPMS 565
            F  +
Sbjct: 422 PFART 426


>gi|91226782|ref|ZP_01261435.1| lysyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91188913|gb|EAS75197.1| lysyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 505

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 68/305 (22%), Positives = 134/305 (43%), Gaps = 37/305 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIAKSVRSEWVLCIDGLVM 78
           V ++G +   R      FL I++  G  Q  A+        E  + +    ++ + G + 
Sbjct: 68  VAIAGRIMAKRGP----FLVIQETSGRIQAYADKAVQKVLKEKYQGLDIGDIIGVKGALH 123

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                        G + ++ ++ E+L+ A   PLP        + +R++ R++DL  +  
Sbjct: 124 KSGK---------GDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNED 173

Query: 139 HKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
            +   V R+++++++R  MI++ F+E  TP++        AR F+          Y L  
Sbjct: 174 SRQAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMY-LRI 232

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +
Sbjct: 233 APELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMDLTEEL 291

Query: 257 LRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDK--------PDLRNPIIM 299
           L  V +E     ++            + R+   +AI+ Y  D          DL+N  +M
Sbjct: 292 LSSVAQEVLGSTSMPYGDETVEFGGTYTRMSMFEAIKHYNPDHSQIQALTEEDLQNRDLM 351

Query: 300 HNVTE 304
            ++ +
Sbjct: 352 VSIAK 356



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 381 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 440

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 441 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 499


>gi|34540852|ref|NP_905331.1| asparaginyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|59798576|sp|Q7MVE5|SYN_PORGI RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|34397166|gb|AAQ66230.1| asparaginyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 469

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 55/291 (18%), Positives = 105/291 (36%), Gaps = 23/291 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
              RT     L    VG  + + GWV   R +  + F+ + D   I  +    D A F+ 
Sbjct: 4   KMKRTRIADALHGGLVGQEINIKGWVRTKRGNKAVNFIALNDGSTIHNMQIVADLASFDA 63

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+           G  +      + +      +E+ A  IEI   A+    P+  +    
Sbjct: 64  AQM-----SQITTGACIGVIGTLVESQGAGQSVEVQASAIEIYGTADPATYPLQKKGHTL 118

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +   L  R +T       R  +  ++      + +     P++TAS  EGA    
Sbjct: 119 EFLR-EIAHLRPRTNTFGAIYRIRHHMAIAIHTFFHNKGYYYFHAPLITASDCEGAGQMF 177

Query: 182 VPSRVNQG--------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDED 224
             + +N                 F+    +     Q +  + A      +   P FR E+
Sbjct: 178 QVTTLNPDSLPRTEEGQVDYRKDFFGRHTSLTVSGQLEGEMAAMALGGIYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
             + R   EF+ ++ E++F+E +D ++  E  ++   +   +      +FL
Sbjct: 238 SNTPRHLAEFWMIEPEVAFLEIEDNMDLAEEFIKYCVQWALDNCMDDISFL 288



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 67/196 (34%), Gaps = 23/196 (11%)

Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFP 441
            +   +    D +  D   F+   P    ++    R      L     N  +F    +FP
Sbjct: 283 DDISFLSEHFDKELIDRLKFVLEKPFVRLAYTEGIRI-----LEEAVKNGVKF----EFP 333

Query: 442 FY---EWNEEEKKIDFAHNPFTMPQGGMES-------LKGNDLLSIKAFQYDLVCNGFEI 491
            Y   +   E ++     +  T               +K ND          L     EI
Sbjct: 334 IYWGADLASEHERYLVEVHFKTPVIMTDYPKEIKSFYMKLNDDGKTVRGMDVLFPKIGEI 393

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    + ++   + +G+ ++ +         + + G  PH G   G +R+++ + 
Sbjct: 394 IGGSEREADYDKLVARANEMGVPEKDIW----WYLDSRRYGTAPHSGFGLGFERLLLFVT 449

Query: 552 GAKNVREVSLFPMSQN 567
           G  N+R+V  FP + N
Sbjct: 450 GMSNIRDVIPFPRTPN 465


>gi|297625163|ref|YP_003706597.1| lysyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297166343|gb|ADI16054.1| lysyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 494

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 63/297 (21%), Positives = 117/297 (39%), Gaps = 26/297 (8%)

Query: 2   HRYR-THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           +RYR TH+   L      +           V ++G V  +R  G   F  ++D  G  Q 
Sbjct: 29  YRYRPTHTAAALHAEHPKAALQPGDTFPGEVTVAGRVMLLRGMGKATFATLQDASGQIQA 88

Query: 51  VANPDS-ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
               D    +   K +     L + G +             TG++ + AQ+   L  +  
Sbjct: 89  YFQKDHLEHYNALKKIDLGDWLEVTGTLFVT---------KTGELTVQAQRFRPLVKSLR 139

Query: 110 LPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
            PLP        + +R++ R LDL     + +  V R+R ++ +R  +    F+E  TP+
Sbjct: 140 -PLPDKFHGLADKEVRYRQRHLDLLVSPEVKRAFVLRSRAVSFIRRYLDDLGFLEVETPV 198

Query: 169 LTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L +      AR F          F+ L  + + Y + L+  GFD  ++I   FR+E    
Sbjct: 199 LQSVPGGAEARPFTTHHNALSHDFH-LRISLELYLKRLIIGGFDAVYEIGRNFRNEGLSP 257

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
              P E+  L++  +  + +DIL  +E++   + E  +    +    + + +     
Sbjct: 258 KHNP-EYTMLELYWAGRDYEDILALVEDMYSRLVETLTGSTKLVYQGVTLDFTPPWP 313



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 4/93 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++ VC G E+ +     +        F      +E  +            A +
Sbjct: 397 RPGLVERFEPVCMGMELGNAFSELNDPLEQRARFEAQQRLREAGDEEAHPLDEEFLAALE 456

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP GG+  GIDR+ MLL  A ++R+V LFP
Sbjct: 457 VGMPPTGGLGLGIDRLAMLLADAPSIRDVILFP 489


>gi|320105485|ref|YP_004181075.1| asparaginyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319924006|gb|ADV81081.1| asparaginyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 455

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 60/297 (20%), Positives = 114/297 (38%), Gaps = 14/297 (4%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVL 71
              G  V L GW++ +R  G ++F   RD  G  Q +          FE  K++  E  +
Sbjct: 18  QHEGQSVTLRGWLYNLRASGKLLFPIFRDGTGTIQGIVPKAAVPEEVFETLKNLTLESSV 77

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G V + S             EL  + +++L   ++        +E+      ++R L
Sbjct: 78  IVTGKVRADSR-------APSGFELDVEDVQVLQRVDDATPFPITLKEHGVDFLMEHRHL 130

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R       +  R  I+ +         F     PILT ++ EG  +       +QG+ 
Sbjct: 131 WMRTPRQSAILRVRATIMRAAAEYFDTNGFTRTDPPILTPNACEGTSELFEMEYFDQGNA 190

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E++F+E D +++
Sbjct: 191 Y-LTQSGQLYIE-ATALALGKVYSFGPTFRAEKSKTRRHLTEFWMIEPEVAFLELDGLMD 248

Query: 252 TMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
             E  L  +       +          I   +A+   G +   +  P + ++     
Sbjct: 249 LSEAFLTHIVTTVLAQHRAELKVIGRDIAVLEAVVAPGPNGERVPFPRLSYDQAHEM 305



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 10/115 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   A   F M    ++  +   L  +    Y       EI  G  R H  +++      
Sbjct: 345 RYPTAIKAFYMQPDPVDPARTLCLDVLAPEGY------GEIIGGSQRIHDYDLLKSRIEQ 398

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G+      + F       + G  PH G   GI+R V  + G  +VRE   F  +
Sbjct: 399 HGLPL----DAFQWYLDLRRYGSVPHAGFGMGIERAVAWICGLDHVRETIPFART 449


>gi|315166437|gb|EFU10454.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1341]
          Length = 450

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 76/352 (21%), Positives = 132/352 (37%), Gaps = 45/352 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEI 61
               VG  V++  W+   R  G I FL +RD       VV  P+          +  F+ 
Sbjct: 15  SNKHVGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQE 74

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K +  E  + + G++   S             E+    +E++  +E+ P+     +E+ 
Sbjct: 75  IKHLSQETAVMVTGVIKEDSRSKF-------GYEMDITDLEVVGASEDYPITP---KEHG 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +  
Sbjct: 125 TDFLMDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELF 184

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 Q +F  L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 185 ETDYFGQPAF--LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRR 285
           ++   ++ L+  E  ++ + +                           F RI YDDAI  
Sbjct: 242 AYTTHEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVLEPFKRITYDDAIEL 301

Query: 286 YG-----TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
                   D   +       +  E F+ + + V + IL+     + + +   
Sbjct: 302 LQKEEANNDYDHIEWGEDFGSPHETFISNYYGVPTFILNYPKAIKAFYMKPH 353



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF-------QYDLVC----- 486
           D+   EW E+       H  F     G+ +   N   +IKAF       + D+V      
Sbjct: 310 DYDHIEWGEDFG---SPHETFISNYYGVPTFILNYPKAIKAFYMKPHPTREDVVICADLI 366

Query: 487 ---NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
                 EI  G  R    + + +  +  G+S    E  +       + G  PH G   G+
Sbjct: 367 APEGYGEIIGGSERATDYDYLKEKVAEFGLS----EEEYSWYLDLRKYGSVPHSGFGLGL 422

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R V  + G +++RE   FP  
Sbjct: 423 ERAVTFITGNEHIREAIPFPRM 444


>gi|312978417|ref|ZP_07790159.1| lysine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|310894760|gb|EFQ43832.1| lysine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 511

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 64/321 (19%), Positives = 122/321 (38%), Gaps = 20/321 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L         +++G +   R  G + F D+ D  G  Q+    D    + 
Sbjct: 39  EKYGNEDKEELNADMP--KTKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDN 96

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  +   +    G+      E       TG++ + A  +  LS A   PLP        
Sbjct: 97  YKIFKKSDIGDFLGI------EGEVMKTDTGELTIRALHVTFLSKALR-PLPDKYHGLKD 149

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
               ++ R+LDL  +         RT+II ++R  + ++NF+E  TP+L        AR 
Sbjct: 150 VEAIYRQRYLDLITNHDSYMRFVHRTQIIQAIRDYLNSQNFLEVETPVLHNIPGGAEARP 209

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+        + Y +  A +   + L+    +R ++I   FR+E   +   P EF +L+ 
Sbjct: 210 FITHHNALDINLY-MRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELES 267

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PD 292
             ++ +  D+++  E ++R   +  S+   ++     I      RR             D
Sbjct: 268 YAAYWDYHDVMDEAEGIIRAAAKVVSDDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVD 327

Query: 293 LRNPIIMHNVTEHFVHSEFRV 313
              P+ +   T+     +  V
Sbjct: 328 FWKPMTLEEATKIAEDHDIHV 348



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 112/348 (32%), Gaps = 26/348 (7%)

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGV-FEEF-----SNGNTVSNNFLRICYDDA 282
           R        D  M FV +  I+  + + L    F E       N    +     I + +A
Sbjct: 157 RYLDLITNHDSYMRFVHRTQIIQAIRDYLNSQNFLEVETPVLHNIPGGAEARPFITHHNA 216

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +      +  L  P+    V +     E     +   ++  +       +       + D
Sbjct: 217 LDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNPEFTELESYAAYWDYHD 276

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            M+E                + + G +   G             +   +  + G   +  
Sbjct: 277 VMDEAEGIIRAAAKV-----VSDDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVDFW-- 329

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
              P+            IA++  I     ++   I++  F+E   EE  +D         
Sbjct: 330 --KPMTLEEA-----TKIAEDHDIHVEKFWKVGHIINA-FFEKYCEETIVDPTFVYGHPV 381

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           +    + K  D       ++++   G E  +     +  +   + F      +E   +  
Sbjct: 382 EISPLAKKNAD-DPRFTDRFEIYIMGEEYGNAFSELNDPDDQRERFEAQMEEREAGNDEA 440

Query: 523 G----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                   RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 441 DMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 488


>gi|294055084|ref|YP_003548742.1| lysyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293614417|gb|ADE54572.1| lysyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 505

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 66/308 (21%), Positives = 121/308 (39%), Gaps = 23/308 (7%)

Query: 6   THSCGD---LGVSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           TH+  +   L   DV       V+++G +   R  G   F+ I+D  G  Q     D   
Sbjct: 40  THTSAEAIKLYKEDVADEEQALVKIAGRITVFRVMGKASFIKIQDREGPIQCYVTRDELP 99

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
                +    +     G ++            TG+I + A K  ++S +   PLP     
Sbjct: 100 EGEYNT---YFKKLDLGDIIGIEGRLF--KTKTGEITVRASKYTLVSKSLR-PLPEKWSG 153

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
              +   ++ R+LDL  +   +N  K R  II  MR  +   +F E  TP+L   +    
Sbjct: 154 LKDDDKIYRQRYLDLIVNQESRNRFKQRADIIKEMRKYLWERDFQEVETPVLQGVAGGAA 213

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+         FY +  A + Y + ++  G DR F+I   FR+E   S R   EF  
Sbjct: 214 ARPFMTHFNALDCRFY-MRIALELYLKRMLVGGEDRVFEIGRVFRNEGL-SRRHNPEFTM 271

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           L++  ++ +   ++   + +++ V E+      +         D  +   G +  + +  
Sbjct: 272 LELYQAYTDFRGMMELTQGLIQHVAEKVIGTLKIER------PDGQVIDLGGEWREAKYK 325

Query: 297 IIMHNVTE 304
            ++   T+
Sbjct: 326 DLIIEATK 333



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/173 (24%), Positives = 66/173 (38%), Gaps = 7/173 (4%)

Query: 392 DMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKK 451
           + +  D       DP  F     + +   A+ LGI      E   I     +E   E   
Sbjct: 321 EAKYKDLIIEATKDPEWFSHTR-EVKLEKARALGIEVDGELEDYEITGN-VFEKVIEPTL 378

Query: 452 IDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           I       T     +  L K           ++L  NG EIA      +   +  + F  
Sbjct: 379 IQPTF--VTHIPRELCPLAKITQDDETTIDVFELCINGQEIAPAYSEQNDPIIQKKMFLE 436

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                  V++       A + GMPP GG+  GIDR+++LL GA+++R+  LFP
Sbjct: 437 QVGE--EVQDMDTDFITALEHGMPPAGGMGLGIDRLIILLTGAESIRDTILFP 487


>gi|197102148|ref|NP_001125925.1| aspartyl-tRNA synthetase, cytoplasmic [Pongo abelii]
 gi|75070680|sp|Q5R9I5|SYDC_PONAB RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|55729693|emb|CAH91575.1| hypothetical protein [Pongo abelii]
          Length = 501

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 87/379 (22%), Positives = 150/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL +      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--------- 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +         
Sbjct: 110 KESIVDVEGVV--RKVNQKIESCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 118 ----REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                   +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F       N       F      LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    + ++ +    ++F +  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLIKEKYDTDFYILDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 345 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLIKEKYD----TDFYILD------KY 394

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 395 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 445

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 446 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501


>gi|257082040|ref|ZP_05576401.1| asparaginyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256990070|gb|EEU77372.1| asparaginyl-tRNA synthetase [Enterococcus faecalis E1Sol]
          Length = 450

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 76/352 (21%), Positives = 132/352 (37%), Gaps = 45/352 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEI 61
               VG  V++  W+   R  G I FL +RD       VV  P+          +  F+ 
Sbjct: 15  SNKHVGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQE 74

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K +  E  + + G++   S             E+    +E++  +E+ P+     +E+ 
Sbjct: 75  IKHLSQETAVMVTGVIKEDSRSKF-------GYEMDITDLEVVGASEDYPITP---KEHG 124

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +  
Sbjct: 125 TDFLMDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELF 184

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 Q +F  L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 185 ETDYFGQPAF--LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEM 241

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRR 285
           ++   ++ L+  E  ++ + +                           F RI YDDAI  
Sbjct: 242 AYTTHEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIEL 301

Query: 286 YG-----TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
                   D   +       +  E F+ + + V + IL+     + + +   
Sbjct: 302 LQKEEANNDYDHIEWGEDFGSPHETFISNYYGVPTFILNYPKAIKAFYMKPH 353



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF-------QYDLVC----- 486
           D+   EW E+       H  F     G+ +   N   +IKAF       + D+V      
Sbjct: 310 DYDHIEWGEDFG---SPHETFISNYYGVPTFILNYPKAIKAFYMKPHPTREDVVICADLI 366

Query: 487 ---NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
                 EI  G  R    + + +  +  G+S    E  +       + G  PH G   G+
Sbjct: 367 APEGYGEIIGGSERATDYDYLKEKVAEFGLS----EEEYSWYLDLRKYGSVPHSGFGLGL 422

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R V  + G +++RE   FP  
Sbjct: 423 ERAVTFITGNEHIREAIPFPRM 444


>gi|34763426|ref|ZP_00144374.1| Lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886895|gb|EAA24019.1| Lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 493

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 61/314 (19%), Positives = 124/314 (39%), Gaps = 16/314 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + +G +  +R  G + F  I D  G  Q+    D    E    +     +   G ++   
Sbjct: 57  KTAGRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNV---GDIIGLE 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E    +  T ++ L  + I +L+      LP          IR++ R++DL  +   ++
Sbjct: 114 GELFITH--TEELTLRVKSIALLTK-NVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRD 170

Query: 142 -IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQ 199
             +KRT+II ++R  +    F+E  TPI+        A+ F+          Y L  AP+
Sbjct: 171 TFIKRTKIIKAIRKYLDDRGFLEVETPIMHPILGGAAAKPFITHHNTLNIDLY-LRIAPE 229

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R + +   FR+E   +   P EF  +++  +  +  D+++  E ++  
Sbjct: 230 LYLKKLIVGGFERVYDLNRNFRNEGISTRHNP-EFTMVELYQAHADFHDMMDLCEGIISS 288

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP------DLRNPIIMHNVTEHFVHSEFRV 313
           V +E +    +  + +++   +  R +  D        D    +      +        V
Sbjct: 289 VCKEVNGTTDIEYDGVKLSLKNFARVHMVDMIKEVTGVDFWKEMTFEEAKQIAKEHHIEV 348

Query: 314 FSKILSVNPGYEVW 327
              + SV      +
Sbjct: 349 ADHMNSVGHIINEF 362



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + +  D  +    +++L  N  E A+     +  
Sbjct: 362 FFEQKCEEKVIQPTFVYGHPVEISPLAKRNEDNPNF-TDRFELFINKREYANAFTELNDP 420

Query: 502 EVML-----QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                    Q    +  ++E           A + G+PP GG+  GIDR+VMLL GA ++
Sbjct: 421 ADQRGRFESQVEEAMHGNEEATPEIDESFVEALEYGLPPTGGLGIGIDRLVMLLTGAPSI 480

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 481 RDVILFPQMK 490


>gi|300118068|ref|ZP_07055816.1| aspartyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|298724379|gb|EFI65073.1| aspartyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 432

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A F 
Sbjct: 5   MKRSLTKEC----TEKSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGF- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++  
Sbjct: 60  ---KVDVESVVHVIGEIVETSKTEL-------GVEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/164 (29%), Positives = 68/164 (41%), Gaps = 28/164 (17%)

Query: 406 PLKFCSFA--ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
             K+C  +   D      + LG      +  EF +I  +P             A   +TM
Sbjct: 287 KSKYCKESPVGDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTM 335

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P     S+  +         +DL+  G EI SG  R H  E++L +F   G+      ++
Sbjct: 336 PNNENSSITDS---------FDLLYKGLEITSGAQRIHNYEMLLDSFKEKGLHP----DK 382

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           F      F+ G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 383 FQSYLNTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|282860274|ref|ZP_06269344.1| asparagine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282586948|gb|EFB92183.1| asparagine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 463

 Score =  190 bits (483), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 59/290 (20%), Positives = 115/290 (39%), Gaps = 26/290 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE 60
             RT     L  +D G  + + GWV   R    + F+ + D   I   QVV +P S   E
Sbjct: 1   MKRTKVVDALSSTDFGKEIIVKGWVRSHRSSKAVDFIALNDGSTIKNIQVVVDPSSIDEE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             KS+ +   + + GL++    +   +       E+  + I I  +      P+  + + 
Sbjct: 61  TLKSITTGACIGVTGLLVESQGKGQTS-------EIQGKDIVIYGLC-PSDYPMQKKGQS 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KY  + LR +T       R  +  ++        F    TP++T S  EGA + 
Sbjct: 113 FEYMR-KYGHMRLRTNTFGAVFRIRHNMAIAIHRYFHEHGFYYFHTPLITGSDAEGAGNM 171

Query: 181 LVPSRVNQG------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDP 225
              + ++               F+          Q +  L A+     +   P FR E+ 
Sbjct: 172 FQVTTLDLERVAKSGKVEYEQDFFGKRTHLTVSGQLEGELGATALGAIYTFGPTFRAENS 231

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + R   EF+ ++ E++F++++D+++  E+ ++   +   +       FL
Sbjct: 232 NTPRHLAEFWMVEPEVAFIDKEDLMDLEEDFIKYCVQWALDNCKDDLEFL 281



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 14/119 (11%)

Query: 450 KKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
                    F M +    ++++G D+         L     EI  G +R    + ++   
Sbjct: 354 NDYPAEIKSFYMKKNEDGKTMQGTDV---------LFPRIGEIIGGSVREENYDKLVAEI 404

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              G+       ++       + G  PHGG   G +R+++ + G +N+R+V  F  +  
Sbjct: 405 EKRGMKV----EQYDWYLDTRKYGSCPHGGFGLGFERLILFVTGMQNIRDVIPFARTPK 459


>gi|228993282|ref|ZP_04153198.1| Asparaginyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228766350|gb|EEM14993.1| Asparaginyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 463

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 123/357 (34%), Gaps = 51/357 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWV 70
                   V++SGW+  +R      F+++ D      V    + +   F+    +     
Sbjct: 13  TDKYADQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G +++               E+ A+KI+I  +++    P+  +R   E +R     
Sbjct: 73  VKVEGKLVATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++        F+   TPI+T S  EGA +    +  +   
Sbjct: 124 LRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDMNN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 LPKGEDGKVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F E +D+++  E++L+   +           F                   
Sbjct: 244 FWMVEPEIAFAELEDVMDLTEDMLKYAMKYVLEHAPEEMEFFNSFVDKTVLERMNNVINS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
              RI Y +AI+       D + P+   +   TEH  +    +F + + V    +  
Sbjct: 304 DFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI 360



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 66/203 (32%), Gaps = 34/203 (16%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M          ND     A    LV  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMRM--------NDDGKTVAATDLLVPG 383

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             E+  G  R    +V++     +G++    E  +       + G   H G   G +R +
Sbjct: 384 IGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERFL 439

Query: 548 MLLLGAKNVREVSLFPMSQNFCD 570
           M + G  N+R+V  FP +    +
Sbjct: 440 MYITGMANIRDVIPFPRTPGSSE 462


>gi|73984263|ref|XP_848666.1| PREDICTED: similar to Aspartyl-tRNA synthetase (Aspartate--tRNA
           ligase) (AspRS) isoform 2 [Canis familiaris]
          Length = 501

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 150/381 (39%), Gaps = 47/381 (12%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKS 64
             DL V      V +   VH  R  G   FL +R        +  V  +      + A +
Sbjct: 48  VSDLTVHKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAAN 107

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE-- 122
           +  E ++ ++G+V  R       +     +EL  QKI ++S+AE        +   PE  
Sbjct: 108 INKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEVE 165

Query: 123 -----------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
                        R   R +DLR  T       ++ I +  R  +I + F+E  TP + +
Sbjct: 166 GEEEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIIS 225

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R  
Sbjct: 226 AASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHL 283

Query: 232 GEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------ 274
            EF  LD+EM+F        ++I +T+  + +G+ + F       N       F      
Sbjct: 284 TEFVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPT 343

Query: 275 LRICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYE 325
           LR+ Y +A+           D+ DL  P    +  + +    ++F +  K  L+V P Y 
Sbjct: 344 LRLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFYT 403

Query: 326 VWAIPAKGGGGNRAFCDRMNE 346
           +          +     R  E
Sbjct: 404 MPDPRNPKQSNSYDMFMRGEE 424



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 345 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYD----TDFYILD------KY 394

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 395 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 445

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 446 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501


>gi|260102344|ref|ZP_05752581.1| lysine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083853|gb|EEW67973.1| lysine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 516

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 61/301 (20%), Positives = 116/301 (38%), Gaps = 18/301 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +++G +   R  G + F D+ D  G  Q+    D    +     +   +    G  +   
Sbjct: 62  KIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYNIFKKSDI----GDFLGID 117

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E +     TG++ + A  +  LS A   PLP            ++ R+LDL  +     
Sbjct: 118 GEVM--KTDTGELTVRATHVTFLSKALR-PLPDKYHGLKDVEAIYRQRYLDLITNRDSYM 174

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
               RT+II ++R  +  +NF+E  TP+L        AR F+          Y +  A +
Sbjct: 175 RFVHRTQIIQAIRDYLNKQNFLEVETPVLHNIPGGAEARPFITHHNALDIDLY-MRIALE 233

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  E ++R 
Sbjct: 234 LPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDFHDVMDEAEGIIRA 292

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPIIMHNVTEHFVHSEFR 312
             +  S+   ++     I      RR             D   P+ +   T+     +  
Sbjct: 293 AAKVVSDDGKITYQGQDIDLGKPFRRIHMVDLIKEKTGVDFWKPMTLEEATKIAEDHDIH 352

Query: 313 V 313
           V
Sbjct: 353 V 353



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 6/153 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IA++  I     ++   I++  F+E   EE  +D         +    + K  D    
Sbjct: 343 TKIAEDHDIHVEKFWKVGHIINA-FFEKYCEETIVDPTFVYGHPVEISPLAKKNAD-DPR 400

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGM 533
              ++++   G E  +     +  +     F      +E   +          RA + GM
Sbjct: 401 FTDRFEIYIMGEEYGNAFSELNDPDDQRARFEAQMEEREAGNDEADMVDEDYLRAMEYGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 461 PPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 493


>gi|256822768|ref|YP_003146731.1| asparaginyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796307|gb|ACV26963.1| asparaginyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 465

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 63/384 (16%), Positives = 123/384 (32%), Gaps = 50/384 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V + GWV   R    G+ F++I D      + A  D+        V    +    G 
Sbjct: 16  GEQVTVQGWVRTRRDSKAGLSFVNIHDGSCFNPIQAVVDNNVANYESEV----IKVTAGC 71

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            +  + + + +       E+ A ++E+L   ++        + +          L  R +
Sbjct: 72  SIRVTGKLVESQGKGQSYEIQASEVEVLGWVDDPDTYPIQPKPHSVEFLRDNAHLRPRTN 131

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-------- 188
            +      R  +  ++   M  + +    TPI+TAS  EGA +    S ++         
Sbjct: 132 LIGAVTRVRNCLAQAVHRFMHEQGYFWIHTPIITASDAEGAGEMFRVSTLDMTNLPKTDK 191

Query: 189 ------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+          Q           + +   P FR E+  + R   EF+ ++ 
Sbjct: 192 GDIDYSKDFFGKESFLTVSGQLNVESYCMAMSKVYTFGPTFRAENSNTSRHLAEFWMVEP 251

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRIC 278
           E++F    D  +  E +++ +F+   +                      N +++NF R+ 
Sbjct: 252 EIAFANLSDNADLAEAMMKYIFKAVLDECADDMAFFQQRVDKDCINRLENVINHNFERMD 311

Query: 279 YDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
           Y D I            P+   +   +EH  +      ++     P   +          
Sbjct: 312 YTDVIDVLKKADKKFDYPVEWGIDLQSEHERY-----IAEEYVGRPTVVMNYPKDIKAFY 366

Query: 337 NRAFCDRMNEWARSQGQPGLAYIF 360
            R   D     A     PG+  I 
Sbjct: 367 MRLNDDGKTVAAMDVLAPGIGEII 390



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 80/221 (36%), Gaps = 18/221 (8%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FW ++     A +   A     +     +  LD    D  FF         +   +  NH
Sbjct: 246 FWMVEPEIAFANLSDNADLAEAMMKYIFKAVLDECADDMAFFQQRVDKDCINRLENVINH 305

Query: 420 IAQELG------IINCNCFEFCWIMDFPFYEWNEEEKKI--DFAHNPFT-MPQGGMES-- 468
             + +       ++     +F + +++     +E E+ I  ++   P   M         
Sbjct: 306 NFERMDYTDVIDVLKKADKKFDYPVEWGIDLQSEHERYIAEEYVGRPTVVMNYPKDIKAF 365

Query: 469 -LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
            ++ ND     A   D++  G  EI  G  R    +V+ +    +G+     E+ +    
Sbjct: 366 YMRLNDDGKTVA-AMDVLAPGIGEIIGGAQREERLDVLDKRIEEMGLP---AEDYW-WYR 420

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              + G  PH G   G DR V  + G +N+R+V  FP   N
Sbjct: 421 DLRRYGTVPHAGFGLGFDRCVSYVTGVQNIRDVIPFPRVPN 461


>gi|299538659|ref|ZP_07051942.1| asparaginyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298726246|gb|EFI66838.1| asparaginyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 431

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 77/322 (23%), Positives = 122/322 (37%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
              +G  V++  W+   R  G I FL +RD  G  Q V   +      F  AK +  E  
Sbjct: 10  PQHIGETVKIGAWLANKRSSGKIAFLQLRDGSGFVQGVVVKEEVGEEIFATAKGMTQETS 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G V +    +          EL+   IE+L  A + P+     +E+        R 
Sbjct: 70  MYVIGEVKADERSSFGC-------ELAITGIEVLHAATDFPITP---KEHGPEFLMDNRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II +         F +   PILT S+PEG  +       ++ +
Sbjct: 120 LWLRSRKQHAIMKIRNEIIRATYEFFNNNGFTKMDPPILTGSAPEGTSELFHTKYFDEDA 179

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L
Sbjct: 180 Y--LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVEFEENL 236

Query: 251 NTMENVLRGVFEEFSNGN---------------TVSNNFLRICYDDAI---RRYGTDKPD 292
              E  +  + +                      +   F RI YDDAI      G D  +
Sbjct: 237 EVQEQYVAHIVQSVLANCKLDLERLGRDTSTLENIKAPFPRISYDDAIKLLHEQGFDDIE 296

Query: 293 LRNPIIMHNVTEHFVHSEFRVF 314
             +     + T      +  VF
Sbjct: 297 WGDDFGAPHETAIANSFDKPVF 318



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 56/189 (29%), Gaps = 21/189 (11%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
            L++         L+            D +K              + G  +       + 
Sbjct: 255 KLDLERLGRDTSTLENIKAPFPRISYDDAIKLLHEQGFDDIEWGDDFGAPHETAIANSF- 313

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGG 495
            D P +              PF M         +   DL++ + +         EI  G 
Sbjct: 314 -DKPVF-----ITCYPVGIKPFYMQPHPDRDDVVLCADLIAPEGYG--------EIIGGS 359

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            R H  +++        +S     + +       + G  PH G   G++R V  + G ++
Sbjct: 360 ERIHDYDLLKSRLEEHNLSL----DAYAWYLELRKHGSVPHSGFGLGLERTVAWISGTEH 415

Query: 556 VREVSLFPM 564
           +RE   FP 
Sbjct: 416 IRETIPFPR 424


>gi|29349281|ref|NP_812784.1| asparaginyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253570373|ref|ZP_04847782.1| asparaginyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298384819|ref|ZP_06994378.1| asparagine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|38258349|sp|Q8A0Z8|SYN_BACTN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|29341189|gb|AAO78978.1| asparaginyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251840754|gb|EES68836.1| asparaginyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298261963|gb|EFI04828.1| asparagine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 467

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 57/293 (19%), Positives = 107/293 (36%), Gaps = 25/293 (8%)

Query: 1   MHRY-RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L   D+G+ V + GWV   R    + F+ + D   I  V    D A F
Sbjct: 1   MEKIGRTKIVDLLKREDIGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLANF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +          L   G  +S +   + +     ++E+ A++IE+L   +        ++ 
Sbjct: 61  DE-----EMLKLITTGACISVNGVMVESVGSGQKVEVQAKEIEVLGTCDNTYPLQ--KKG 113

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           +      +   L  R +T       R  +  ++      + F    TPI+T S  EGA  
Sbjct: 114 HSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITGSDCEGAGQ 173

Query: 180 FLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRD 222
               + +N                 F+    +     Q +  L A+     +   P FR 
Sbjct: 174 MFQVTTMNLYDLKKDERGSISYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRA 233

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           E+  + R   EF+ ++ E++F +  D ++  E  ++   +   +       FL
Sbjct: 234 ENSNTPRHLAEFWMIEPEVAFNDIADNMDLAEEFIKYCVKWALDNCADDVKFL 286



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 75/225 (33%), Gaps = 31/225 (13%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL-DMQDGDSCFFIAGDPLKFCSFAA 414
           LA  F +      +       K LN +  + +  RL  +   D       D +K    A 
Sbjct: 263 LAEEFIKYCVKWALDNCADDVKFLNDMFDKGLIERLQGVLKDDFVRLPYTDGIKILEDAV 322

Query: 415 DARNHIAQELGIINCNCFEF--CWIMDFPFYEWNEEEKKIDFAHN----PFTMPQGGMES 468
                          + FEF   W +D      +E E+ +   H       T     +++
Sbjct: 323 A------------KGHKFEFPVYWGVDL----ASEHERYLVEEHFKRPVILTDYPKEIKA 366

Query: 469 L---KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
               +  D  +++A    L     EI  G  R      ++     + I  + +       
Sbjct: 367 FYMKQNEDGKTVRAMDV-LFPKIGEIIGGSEREADYNKLMTRIEEMHIPMKDMW----WY 421

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
               + G  PH G   G +R+++ + G  N+R+V  FP +    D
Sbjct: 422 LDTRKFGTCPHSGFGLGFERLLLFVTGMSNIRDVIPFPRTPRNAD 466


>gi|228999332|ref|ZP_04158912.1| Asparaginyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229006887|ref|ZP_04164519.1| Asparaginyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228754380|gb|EEM03793.1| Asparaginyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228760529|gb|EEM09495.1| Asparaginyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 463

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 123/357 (34%), Gaps = 51/357 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWV 70
                   V++SGW+  +R      F+++ D      V    + +   F+    +     
Sbjct: 13  TDKYADQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELDNFKEIAKLPLSSS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G +++               E+ A+KI+I  +++    P+  +R   E +R     
Sbjct: 73  VKVEGKLVATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++        F+   TPI+T S  EGA +    +  +   
Sbjct: 124 LRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDMNN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 LPKGEDGKVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F E +D+++  E++L+   +           F                   
Sbjct: 244 FWMVEPEIAFAELEDVMDLTEDMLKYAMKHVLEHAPEEMEFFNSFVDKTVLERMNNVINS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
              RI Y +AI+       D + P+   +   TEH  +    +F + + V    +  
Sbjct: 304 DFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI 360



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 66/203 (32%), Gaps = 34/203 (16%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M          ND     A    LV  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMRM--------NDDGKTVAATDLLVPG 383

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             E+  G  R    +V++     +G++    E  +       + G   H G   G +R +
Sbjct: 384 IGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERFL 439

Query: 548 MLLLGAKNVREVSLFPMSQNFCD 570
           M + G  N+R+V  FP +    +
Sbjct: 440 MYITGMANIRDVIPFPRTPGSSE 462


>gi|332826946|gb|EGJ99743.1| lysyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 575

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 58/299 (19%), Positives = 120/299 (40%), Gaps = 19/299 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV  + D  C    K + +     +  +    
Sbjct: 55  VTIAGRIMGRRIMGKASFVELQDAEGRIQVYISRDDLCPTEDKELYNTVFKKLLDIGDFI 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVF------GEREYPESIRFKYRFLDLR 134
             +        G+I + A+++ +L  +      V        +       R++ R++DL 
Sbjct: 115 GIKGFVFRTQMGEISVHAEELTVLGKSLRPLPVVKVKDGVTYDGFTDPEQRYRQRYVDLI 174

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +  +    +KRT++ NSMR  +    +IE  TP+L +      AR F+          Y
Sbjct: 175 VNEGVKDTFIKRTKVFNSMREFLNGHGYIEVDTPVLQSIPGGATARPFITHHNALDIPLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GFD  ++ +  FR+E       P EF  ++   ++ + + +++ 
Sbjct: 235 -LRIANELYLKRLIVGGFDGVYEFSRNFRNEGMDRTHNP-EFTVMEFYAAYKDYNWMMDF 292

Query: 253 MENVLRGVFEEF---------SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
            E +L  +  +           N       + R+   D+I+ +        N + + +V
Sbjct: 293 TERMLEKICMDVHGTTKVKMGKNEIDYKAPYPRVTMIDSIKHFTGVDISGMNEVQLRDV 351



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 20/180 (11%)

Query: 446 NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML 505
           ++ E            P       K +        +++L+ NG E+A+     +      
Sbjct: 375 DKCEGNYIQPTFIIDYPVEMSPLTKKHRNNPELTERFELMVNGKELANAYSELNDPIDQR 434

Query: 506 QAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
             F +     E  ++          RA + GMPP  GI  G+DR+VM + G ++++EV  
Sbjct: 435 ARFEDQLKLSEKGDDEAMFIDQDFLRALEYGMPPTSGIGIGMDRLVMFMTGQESIQEVMF 494

Query: 562 FPMSQNFCDLLMGSPSTVSVE----QLRELGL--RIVENPKKILKISVTTILRNVYGLKI 615
           FP  +         P  V+ +    +  ELG+   +V   +K   ++V   L++V   KI
Sbjct: 495 FPQMR---------PEKVAKKDPVAKYTELGVSEELVPVLQKAGYLTVED-LKDVNPQKI 544


>gi|332676013|gb|AEE72829.1| lysylphosphatidylglycerol biosynthesis bifunctional protein LysX
            [Propionibacterium acnes 266]
          Length = 1120

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 102/563 (18%), Positives = 178/563 (31%), Gaps = 120/563 (21%)

Query: 7    HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 665  HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 724

Query: 67   SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 725  HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 778

Query: 127  KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
            + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 779  RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 838

Query: 185  RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   Y L  AP+ Y + LM  G          F                        
Sbjct: 839  NAYDLDLY-LRIAPELYLKRLMVGGA------GRVF------------------------ 867

Query: 245  EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                           +   F N    + +       +A + YG         + M ++T 
Sbjct: 868  --------------EIGRNFRNEGADATHNPEFTMLEAYQAYGDY-------VQMRHLTR 906

Query: 305  HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                    + S   +   G  V     KG        D  NE           +    ++
Sbjct: 907  EM------ILSAARNATGGTVVRGRDRKGVEH---EIDLANE-----------WHVITVN 946

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            E         +++ L    T        +   +                 +   H+++ +
Sbjct: 947  EG--------ISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSEHV 998

Query: 425  GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                    E  +  DFP               +P T        L         A ++DL
Sbjct: 999  ------TVEPTFFCDFP------------TDVSPLTRQHRDDPRL---------AEKWDL 1031

Query: 485  VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +  G E+ +         +  + F+   +                  A +  MPP GG+ 
Sbjct: 1032 IIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMG 1091

Query: 541  AGIDRIVMLLLGAKNVREVSLFP 563
             G+DR+VM+L  A ++RE   FP
Sbjct: 1092 MGLDRLVMMLTNA-SIRETISFP 1113


>gi|255972158|ref|ZP_05422744.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256617171|ref|ZP_05474017.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256956653|ref|ZP_05560824.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300860825|ref|ZP_07106912.1| asparagine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|255963176|gb|EET95652.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256596698|gb|EEU15874.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256947149|gb|EEU63781.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300849864|gb|EFK77614.1| asparagine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
          Length = 444

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 76/352 (21%), Positives = 132/352 (37%), Gaps = 45/352 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEI 61
               VG  V++  W+   R  G I FL +RD       VV  P+          +  F+ 
Sbjct: 9   SNKHVGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQQ 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K +  E  + + G++   S             E+    +E++  +E+ P+     +E+ 
Sbjct: 69  IKHLSQETAVMVTGVIKEDSRSKF-------GYEMDITDLEVVGASEDYPITP---KEHG 118

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +  
Sbjct: 119 TDFLMDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELF 178

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 Q +F  L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 179 ETDYFGQPAF--LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEM 235

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRR 285
           ++   ++ L+  E  ++ + +                           F RI YDDAI  
Sbjct: 236 AYTTHEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIEL 295

Query: 286 YG-----TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
                   D   +       +  E F+ + + V + IL+     + + +   
Sbjct: 296 LQKEEANNDYDHIEWGEDFGSPHETFISNYYGVPTFILNYPKAIKAFYMKPH 347



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF-------QYDLVC----- 486
           D+   EW E+       H  F     G+ +   N   +IKAF       + D+V      
Sbjct: 304 DYDHIEWGEDFG---SPHETFISNYYGVPTFILNYPKAIKAFYMKPHPTREDVVICADLI 360

Query: 487 ---NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
                 EI  G  R    + + +  +  G+S    E  +       + G  PH G   G+
Sbjct: 361 APEGYGEIIGGSERATDYDYLKEKVAEFGLS----EEEYSWYLDLRKYGSVPHSGFGLGL 416

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R V  + G +++RE   FP  
Sbjct: 417 ERAVTFITGNEHIREAIPFPRM 438


>gi|118477616|ref|YP_894767.1| aspartyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196046105|ref|ZP_03113333.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|118416841|gb|ABK85260.1| aspartyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196023160|gb|EDX61839.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB108]
          Length = 432

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 72/279 (25%), Positives = 127/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A F 
Sbjct: 5   MKRSLTKEC----TEKSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGF- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E ++ + G ++  S   +        +E+ A +++IL+  E LP  +  ++  
Sbjct: 60  ---KVDVESIVHVIGEIVETSKTEL-------GVEVLAHEVKILNGTEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTASIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 228 EIGFINDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 63/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     S+  
Sbjct: 297 GDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTMPNNENPSITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYEMLLTSFKEKGLHP----DKFQSYLNTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V   L   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERVVYKFLELSNVREASAFPRD 426


>gi|331701435|ref|YP_004398394.1| asparaginyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128778|gb|AEB73331.1| Asparaginyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 431

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 73/307 (23%), Positives = 121/307 (39%), Gaps = 32/307 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCI 73
           V   V++  W+   R  G I FL +RD         V +N     FE+AK V+ E  + +
Sbjct: 13  VNEKVKIGVWLTNKRSSGKIAFLQLRDGTAFFQGVVVKSNVTPEVFELAKEVKQETSMWV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++   +             E+  + IE+LS   + P+     +E+       +R L L
Sbjct: 73  TGIIHEDARSKF-------GYEIEIETIEVLSETHDYPITP---KEHGVDFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  +I +       E FI+   PILT S+PEG          ++ ++  
Sbjct: 123 RSSRPHAVMRIRNEVIKATYDFFNDEGFIKIDAPILTGSAPEGTTTLFHTEYFDRDAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L   
Sbjct: 181 LSQSGQLY-EEAGAEAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESLEIQ 239

Query: 254 ENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRRYGTDKPDLRNPI 297
           E  +  +         +                   + RI YD+AI        DL   +
Sbjct: 240 ERYIAYLVTRVLENCQMELKTLGRDPEVLKKYTVLPYPRISYDEAITMLKKGGFDLEWGV 299

Query: 298 IMHNVTE 304
              +  E
Sbjct: 300 DFGSPEE 306



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 50/155 (32%), Gaps = 33/155 (21%)

Query: 426 IINCNCFEFCWIMDF--------------PFYEWNEEEKKIDFAHNPFTMPQGGMES--L 469
           ++    F+  W +DF              P +  N        A  PF M         +
Sbjct: 287 MLKKGGFDLEWGVDFGSPEETYLADQFNQPVFVIN-----YPKAIKPFYMKPHPTRDDVV 341

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              DLL+ + +         EI  G  R    + +       G+  +     +       
Sbjct: 342 ICADLLAPEGYG--------EIIGGSERATDYDYLYDQIVKAGLDPKE----YSWYLDLR 389

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + G  PH G   G++R +  L G  +VRE   FP 
Sbjct: 390 KYGSVPHSGFGLGLERALTWLTGEDHVREAIPFPR 424


>gi|264677131|ref|YP_003277037.1| lysyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262207643|gb|ACY31741.1| lysyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 514

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 65/299 (21%), Positives = 118/299 (39%), Gaps = 20/299 (6%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G +   R  G   F  ++D  G  Q     D+   E+    +   +  I       S E 
Sbjct: 80  GRMMLKRVMGKASFATVQDATGRIQAYVTRDAVGEEVYADFKKWDLGDI------ISVEG 133

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL-HKNIV 143
                 TG++ + A KI +L+ +   P+P           + + R++DL  D    K  V
Sbjct: 134 QLMKTKTGELSIKATKIRLLTKSLR-PMPDKFHGMADLEQKVRQRYVDLMTDEEARKRFV 192

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202
            R++ +  +R  M+   F+E  TP+L        A+ F+          Y L  AP+ Y 
Sbjct: 193 ARSKAVAGIRDFMVEHGFLEVETPMLHPIPGGANAKPFITHHNALDQEMY-LRIAPELYL 251

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D+++  E ++R    
Sbjct: 252 KRLIVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYQDLMDYTEKLIRDAAM 310

Query: 263 EFSN---------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +               ++  F R+   +AI +Y     ++ N   + N  +     E +
Sbjct: 311 KAVGTLELSYGGKPVDLAKPFERLTIPEAIVKYTEAGDNVGNREWLTNALKKLGMKEDK 369



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           ++E   E+K  +     F M      S   + ND       +++L   G E  +G    +
Sbjct: 384 YFEEVVEDKLWNPT---FIMEHPTEISPLARANDERPEVTERFELYITGREFGNGFSELN 440

Query: 500 MSEVMLQAFSNVGISKEVVEN---RFGG-LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            +E     F+    +K+  ++    F     RA + GMPP GG   GIDR +MLL  + +
Sbjct: 441 DAEDQAARFNAQVEAKDSGDDEAMYFDHDFVRALEYGMPPTGGCGIGIDRFMMLLTDSAS 500

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 501 IRDVILFP 508


>gi|50843089|ref|YP_056316.1| lysyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|50840691|gb|AAT83358.1| lysyl-tRNA synthetase [Propionibacterium acnes KPA171202]
          Length = 1120

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 102/563 (18%), Positives = 178/563 (31%), Gaps = 120/563 (21%)

Query: 7    HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 665  HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 724

Query: 67   SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 725  HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 778

Query: 127  KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
            + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 779  RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 838

Query: 185  RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   Y L  AP+ Y + LM  G          F                        
Sbjct: 839  NAYDLDLY-LRIAPELYLKRLMVGGA------GRVF------------------------ 867

Query: 245  EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                           +   F N    + +       +A + YG         + M ++T 
Sbjct: 868  --------------EIGRNFRNEGADATHNPEFTMLEAYQAYGDY-------VQMRHLTR 906

Query: 305  HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                    + S   +   G  V     KG        D  NE           +    ++
Sbjct: 907  EM------ILSAARNATGGTVVRGRDRKGVEH---EIDLANE-----------WHVITVN 946

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            E         +++ L    T        +   +                 +   H+++ +
Sbjct: 947  EG--------ISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSEHV 998

Query: 425  GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                    E  +  DFP               +P T        L         A ++DL
Sbjct: 999  ------TVEPTFFCDFP------------TDVSPLTRQHRDDPRL---------AEKWDL 1031

Query: 485  VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +  G E+ +         +  + F+   +                  A +  MPP GG+ 
Sbjct: 1032 IIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMG 1091

Query: 541  AGIDRIVMLLLGAKNVREVSLFP 563
             G+DR+VM+L  A ++RE   FP
Sbjct: 1092 MGLDRLVMMLTNA-SIRETISFP 1113


>gi|237719082|ref|ZP_04549563.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229451461|gb|EEO57252.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 467

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 58/293 (19%), Positives = 111/293 (37%), Gaps = 25/293 (8%)

Query: 1   MHRY-RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L  +D+G+ V + GWV   R    + F+ + D   I  +    D A F
Sbjct: 1   MEKIGRTKIVDLLKRTDIGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNLQIVVDLAGF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +          L   G  +S + E + +     ++E+ A++IE+L   +        ++ 
Sbjct: 61  DE-----EMLKLITTGACISVNGEMVESVGSGQKVEVQAREIEVLGTCDNTYPLQ--KKG 113

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           +      +   L  R +T       R  +  ++      + F    TPI+TAS  EGA  
Sbjct: 114 HSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQ 173

Query: 180 FLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRD 222
               + +N              +  F+    +     Q +  L A+     +   P FR 
Sbjct: 174 MFQVTTMNLYDLKKDERGSISYEDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRA 233

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           E+  + R   EF+ ++ E++F +  D ++  E  ++   +   +       FL
Sbjct: 234 ENSNTPRHLAEFWMIEPEVAFNDITDNMDLAEEFIKYCVKWALDNCADDVKFL 286



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 71/228 (31%), Gaps = 37/228 (16%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL-DMQDGDSCFFIAGDPLKFCSFAA 414
           LA  F +      +       K LN +  + +  RL  +   D       D +K    A 
Sbjct: 263 LAEEFIKYCVKWALDNCADDVKFLNDMFDKGLIERLQGVLKDDFVRLPYTDGIKILEEAV 322

Query: 415 D------------ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
                               E  ++  +      + D+P     +E K        F M 
Sbjct: 323 AKGHKFEFPVYWGVDLASEHERFLVEEHFKRPVILTDYP-----KEIK-------AFYMK 370

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           Q         D  +++A    L     EI  G  R      ++     + I  + +    
Sbjct: 371 QNE-------DGKTVRAMDV-LFPKIGEIIGGSEREADYNKLMTRIEEMHIPMKDMW--- 419

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                  + G  PH G   G +R+++ + G  N+R+V  FP +    D
Sbjct: 420 -WYLDTRKFGTCPHSGFGLGFERLLLFVTGMANIRDVIPFPRTPRNAD 466


>gi|323697660|ref|ZP_08109572.1| asparaginyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323457592|gb|EGB13457.1| asparaginyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 455

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 67/353 (18%), Positives = 124/353 (35%), Gaps = 43/353 (12%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY--GITQVVANPDSACFE 60
             RT     L  S     +R+ GWV   R + G  FL + D    G  QVV +      E
Sbjct: 1   MKRTKILDALNASAPAEDIRIMGWVRSKRDNKGFSFLALNDGSCLGTIQVVVDHTPEIEE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               + +   + + G ++    +         + E+  + +E++  A++   P+  +R  
Sbjct: 61  ALARIGTGASVAVTGSLVESPGQG-------QKWEVRGRTLEVIGEADQETFPLQKKRHS 113

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R     L  R +        R+ +  ++      + F    TPI+T S  EGA + 
Sbjct: 114 DEFLR-SIAHLRPRTNKFGAMFRMRSHLAQAVHRFFADKGFFYVHTPIITGSDCEGAGEM 172

Query: 181 LVPSRVNQG-------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
              + +  G        F+  P       Q    + A      +   P FR E+  + R 
Sbjct: 173 FRVTALPPGSPEPAENDFFGKPSNLTVSGQLSVEMFALSLGDCYTFGPTFRAENSNTPRH 232

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------T 269
             EF+ ++ E+ F + +D ++  E +++ +     +                        
Sbjct: 233 AAEFWMIEPEICFADLNDDMDLGEEMIKYLVAHMLDTCAEDVELFAKWVDKDLMATLTTI 292

Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
           +   F R+ Y +AI      K     P+   +   TEH        F K + V
Sbjct: 293 LEKPFERLPYTEAISILKKTKKQFEYPVEWGIDLQTEHERFLCEEKFRKPVYV 345



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 24/149 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +  ++ D+P             +  PF M          ND  +  A  
Sbjct: 330 HERFLCEEKFRKPVYVYDYP------------KSIKPFYMRM--------NDDGNTVAAM 369

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    +V+      +G++K+           + + G  PH G   
Sbjct: 370 DCLVPRIGEIIGGSQREERLDVLTARMDELGLNKDEYW----WYLDSRRYGTAPHAGFGM 425

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G +R++ML+ G  N+R+V  FP +    D
Sbjct: 426 GFERMLMLVTGVHNIRDVIPFPRTPKSLD 454


>gi|255975222|ref|ZP_05425808.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256763066|ref|ZP_05503646.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256963547|ref|ZP_05567718.1| asparaginyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257079579|ref|ZP_05573940.1| asparaginyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257087403|ref|ZP_05581764.1| asparaginyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257090537|ref|ZP_05584898.1| asparaginyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257419830|ref|ZP_05596824.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|294779456|ref|ZP_06744854.1| asparagine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|255968094|gb|EET98716.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256684317|gb|EEU24012.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256954043|gb|EEU70675.1| asparaginyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256987609|gb|EEU74911.1| asparaginyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256995433|gb|EEU82735.1| asparaginyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256999349|gb|EEU85869.1| asparaginyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257161658|gb|EEU91618.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|294453462|gb|EFG21866.1| asparagine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|323481329|gb|ADX80768.1| asparaginyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 444

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 76/352 (21%), Positives = 132/352 (37%), Gaps = 45/352 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEI 61
               VG  V++  W+   R  G I FL +RD       VV  P+          +  F+ 
Sbjct: 9   SNKHVGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEEAGTEKFQE 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K +  E  + + G++   S             E+    +E++  +E+ P+     +E+ 
Sbjct: 69  IKHLSQETAVMVTGVIKEDSRSKF-------GYEMDITDLEVVGASEDYPITP---KEHG 118

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +  
Sbjct: 119 TDFLMDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELF 178

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 Q +F  L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 179 ETDYFGQPAF--LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEM 235

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRR 285
           ++   ++ L+  E  ++ + +                           F RI YDDAI  
Sbjct: 236 AYTTHEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIEL 295

Query: 286 YG-----TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
                   D   +       +  E F+ + + V + IL+     + + +   
Sbjct: 296 LQKEEANNDYDHIEWGEDFGSPHETFISNYYGVPTFILNYPKAIKAFYMKPH 347



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF-------QYDLVC----- 486
           D+   EW E+       H  F     G+ +   N   +IKAF       + D+V      
Sbjct: 304 DYDHIEWGEDFG---SPHETFISNYYGVPTFILNYPKAIKAFYMKPHPTREDVVICADLI 360

Query: 487 ---NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
                 EI  G  R    + + +  +  G+S    E  +       + G  PH G   G+
Sbjct: 361 APEGYGEIIGGSERATDYDYLKEKVAEFGLS----EEEYSWYLDLRKYGSVPHSGFGLGL 416

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R V  + G +++RE   FP  
Sbjct: 417 ERAVTFITGNEHIREAIPFPRM 438


>gi|257416582|ref|ZP_05593576.1| asparaginyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257421983|ref|ZP_05598973.1| asparaginyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|257158410|gb|EEU88370.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|257163807|gb|EEU93767.1| asparaginyl-tRNA synthetase [Enterococcus faecalis X98]
          Length = 444

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 76/352 (21%), Positives = 132/352 (37%), Gaps = 45/352 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEI 61
               VG  V++  W+   R  G I FL +RD       VV  P+          +  F+ 
Sbjct: 9   SNKHVGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEETGTEKFQE 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K +  E  + + G++   S             E+    +E++  +E+ P+     +E+ 
Sbjct: 69  IKHLSQETAVMVTGVIKEDSRSKF-------GYEMDITDLEVVGASEDYPITP---KEHG 118

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +  
Sbjct: 119 TDFLMDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELF 178

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 Q +F  L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 179 ETDYFGQPAF--LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEM 235

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRR 285
           ++   ++ L+  E  ++ + +                           F RI YDDAI  
Sbjct: 236 AYTTHEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIEL 295

Query: 286 YG-----TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
                   D   +       +  E F+ + + V + IL+     + + +   
Sbjct: 296 LQKEEANNDYDHIEWGEDFGSPHETFISNYYGVPTFILNYPKAIKAFYMKPH 347



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF-------QYDLVC----- 486
           D+   EW E+       H  F     G+ +   N   +IKAF       + D+V      
Sbjct: 304 DYDHIEWGEDFG---SPHETFISNYYGVPTFILNYPKAIKAFYMKPHPTREDVVICADLI 360

Query: 487 ---NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
                 EI  G  R    + + +  +  G+S    E  +       + G  PH G   G+
Sbjct: 361 APEGYGEIIGGSERATDYDYLKEKVAEFGLS----EEEYSWYLDLRKYGSVPHSGFGLGL 416

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R V  + G +++RE   FP  
Sbjct: 417 ERAVTFITGNEHIREAIPFPRM 438


>gi|229167055|ref|ZP_04294799.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228616408|gb|EEK73489.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 437

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 10  MKRSLTREC----TEHGGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 64

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ I G ++      +        +E+ A ++++L+ AE LP  +  ++  
Sbjct: 65  ---RVDVESVVQIIGEIVETPKTEL-------GVEVLAHEVKVLNGAEPLPFEINKKKLQ 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 115 VGLDQLLNERVLSLRHERIAAIFKVKSILVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 175 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 232

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 233 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 271



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +T+P     ++  
Sbjct: 302 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTIPNKENPTITD 350

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  +++L +F   G+       +F      F+ 
Sbjct: 351 S---------FDLLYKGLEITSGAQRIHNYDMLLASFKEKGLHP----EKFQSYLNTFRY 397

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 398 GCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 431


>gi|299530673|ref|ZP_07044088.1| lysyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298721189|gb|EFI62131.1| lysyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 514

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 65/299 (21%), Positives = 118/299 (39%), Gaps = 20/299 (6%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G +   R  G   F  ++D  G  Q     D+   E+    +   +  I       S E 
Sbjct: 80  GRMMLKRVMGKASFATVQDATGRIQAYVTRDAVGEEVYADFKKWDLGDI------ISVEG 133

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL-HKNIV 143
                 TG++ + A KI +L+ +   P+P           + + R++DL  D    K  V
Sbjct: 134 QLMKTKTGELSIKATKIRLLTKSLR-PMPDKFHGMADLEQKVRQRYVDLMTDEEARKRFV 192

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202
            R++ +  +R  M+   F+E  TP+L        A+ F+          Y L  AP+ Y 
Sbjct: 193 ARSKAVAGIRDFMVEHGFLEVETPMLHPIPGGANAKPFITHHNALDQEMY-LRIAPELYL 251

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D+++  E ++R    
Sbjct: 252 KRLIVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEFYAAYWNYQDLMDYTEKLIRDAAM 310

Query: 263 EFSN---------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +               ++  F R+   +AI +Y     ++ N   + N  +     E +
Sbjct: 311 KAVGTLELSYGGKPVDLAKPFERLTIPEAIVKYTEAGDNVGNREWLTNALKKLGMKEDK 369



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           ++E   E+K  +     F M      S   + ND       +++L   G E  +G    +
Sbjct: 384 YFEEVVEDKLWNPT---FIMEHPTEISPLARANDERPEVTERFELYITGREFGNGFSELN 440

Query: 500 MSEVMLQAFSNVGISKEVVEN---RFGG-LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            +E     F+    +K+  ++    F     RA + GMPP GG   GIDR +MLL  + +
Sbjct: 441 DAEDQAARFNAQVEAKDGGDDEAMYFDHDFVRALEYGMPPTGGCGIGIDRFMMLLTDSAS 500

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 501 IRDVILFP 508


>gi|256961324|ref|ZP_05565495.1| asparaginyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256951820|gb|EEU68452.1| asparaginyl-tRNA synthetase [Enterococcus faecalis Merz96]
          Length = 444

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 76/352 (21%), Positives = 132/352 (37%), Gaps = 45/352 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEI 61
               VG  V++  W+   R  G I FL +RD       VV  P+          +  F+ 
Sbjct: 9   SNKHVGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEVFGEEAGTEKFQE 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K +  E  + + G++   S             E+    +E++  +E+ P+     +E+ 
Sbjct: 69  IKHLSQETAVMVTGVIKEDSRSKF-------GYEMDITDLEVVGASEDYPITP---KEHG 118

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +R L LR    H  ++ R  II +       + FI+  +PILT S+PEG  +  
Sbjct: 119 TDFLMDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELF 178

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 Q +F  L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 179 ETDYFGQPAF--LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEM 235

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRR 285
           ++   ++ L+  E  ++ + +                           F RI YDDAI  
Sbjct: 236 AYTTHEESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIEL 295

Query: 286 YG-----TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
                   D   +       +  E F+ + + V + IL+     + + +   
Sbjct: 296 LQKEEANNDYDHIEWGEDFGSPHETFISNYYGVPTFILNYPKAIKAFYMKPH 347



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF-------QYDLVC----- 486
           D+   EW E+       H  F     G+ +   N   +IKAF       + D+V      
Sbjct: 304 DYDHIEWGEDFG---SPHETFISNYYGVPTFILNYPKAIKAFYMKPHPTREDVVICADLI 360

Query: 487 ---NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
                 EI  G  R    + + +  +  G+S    E  +       + G  PH G   G+
Sbjct: 361 APEGYGEIIGGSERATDYDYLKEKVAEFGLS----EEEYSWYLDLRKYGSVPHSGFGLGL 416

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R V  + G +++RE   FP  
Sbjct: 417 ERAVTFITGNEHIREAIPFPRM 438


>gi|223998046|ref|XP_002288696.1| lysyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220975804|gb|EED94132.1| lysyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 502

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 60/288 (20%), Positives = 123/288 (42%), Gaps = 8/288 (2%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            + ++G +   R  G + F  ++D  G+ Q+  +        A S ++       G ++ 
Sbjct: 58  EIAVAGRIMARRVFGKLAFYTLQDETGVIQLQFDKKRLGERDADSFKNLKAWTDSGDIIG 117

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                   +   G++ L A +  +L+ +  LPLP         S R++ R LDL  +   
Sbjct: 118 AKGTIRRTD--KGELTLYATEWTMLTKS-ALPLPDKYHGLTDISKRYRNRHLDLIVNPSV 174

Query: 140 KNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
           ++   KR +I +S+R ++ A+ F+E  TP+L T      A+ F             L  A
Sbjct: 175 RDTFYKRAKITSSLRRQLDAKGFLEIETPVLHTQPGGAEAKPFETYHNTMDMDL-TLRIA 233

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  GF R +++   FR+E   +   P EF  +++  ++ +  D+++  E ++
Sbjct: 234 TELHLKRLIIGGFPRVYELGRIFRNEGISTRHNP-EFTSVELYQAYADYHDMMDLTEELV 292

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRY-GTDKPDLRNPIIMHNVTE 304
            G+  E S+   +      I  +   RR    D      P    ++++
Sbjct: 293 CGMANEVSDSLIMPYGEYTISLERPWRRVTMHDIVKEEIPDFDFDLSD 340



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 57/158 (36%), Gaps = 27/158 (17%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
           CS      N   +EL        +  +++D+P      E   +   H             
Sbjct: 362 CSTVGYVLNACFEELC--EPKLIQPTFVIDYPV-----EVSPLSKPHR------------ 402

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
             N    +   +++L   G E+A+            + F      K   +          
Sbjct: 403 --NKPGMV--ERFELFATGREMANSFSELTDPVDQRERFEAQAAKKAAGDEEACDVDEEF 458

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A + GMPP GG+  GIDR+VMLL  + ++R+V  FP
Sbjct: 459 LSALEQGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFP 496


>gi|260583582|ref|ZP_05851330.1| asparagine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158208|gb|EEW93276.1| asparagine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 438

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 84/370 (22%), Positives = 143/370 (38%), Gaps = 43/370 (11%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH---YGITQVVANPDSA 57
           M + R +   D     VG  V +  WV   R  G I FL +RD    +    V ++    
Sbjct: 1   MKKIRMNQAKD----YVGQTVLIGAWVANKRSSGKIAFLQLRDGATYFQGIVVKSDVPEE 56

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            FEIAKS+  E  + + G+V   +   +         EL    +E++  + E P+     
Sbjct: 57  VFEIAKSLTQETAVYVTGVVQEDTRSRL-------GYELLVTGLEVIGESHEYPITP--- 106

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           +E+       +R L LR    H  +  R  II +         FI+  +PIL+ ++ E  
Sbjct: 107 KEHGTDFLMDHRHLWLRSSKQHAIMQIRNAIIYASYEFFDQNGFIKFDSPILSGNAAENT 166

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +          +F  L Q+ Q Y +   A  F   F   P FR E  ++ R   EF+ +
Sbjct: 167 TELFETDYFGDPAF--LSQSGQLYLE-AGAMAFGPVFDFGPVFRAEKSKTRRHLTEFWMM 223

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDD 281
           D E  FV  D+ L+  E  ++ + +   +                   VS  F RI YD+
Sbjct: 224 DAEYPFVTHDESLDLQEAYVKALIQGVLDRSPHALETLERDVELLKKYVSEPFKRISYDE 283

Query: 282 AIRRYGTDKPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           AI      + D       L +     +  E ++ + F V + +++     + + +    G
Sbjct: 284 AIDLLQAHEADEDTDYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPADIKAFYMKPVPG 343

Query: 335 GGNRAFCDRM 344
             +R  C  +
Sbjct: 344 NESRVLCADL 353



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    + + +     G++ +     +       + G  PH G   G++R+V  
Sbjct: 361 EIIGGSEREVDYDKLYEKIKENGLNPDD----YAFYLDLRKYGSVPHAGFGLGLERMVTF 416

Query: 550 LLGAKNVREVSLFPM 564
           + G K++RE   FP 
Sbjct: 417 VAGTKHIREAIPFPR 431


>gi|160882412|ref|ZP_02063415.1| hypothetical protein BACOVA_00363 [Bacteroides ovatus ATCC 8483]
 gi|237714338|ref|ZP_04544819.1| asparaginyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262408170|ref|ZP_06084717.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|293369517|ref|ZP_06616096.1| asparagine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|294645460|ref|ZP_06723161.1| asparagine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294806728|ref|ZP_06765555.1| asparagine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|299148165|ref|ZP_07041227.1| asparagine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|156112225|gb|EDO13970.1| hypothetical protein BACOVA_00363 [Bacteroides ovatus ATCC 8483]
 gi|229445502|gb|EEO51293.1| asparaginyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262353722|gb|EEZ02815.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292635402|gb|EFF53915.1| asparagine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292639161|gb|EFF57478.1| asparagine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294446010|gb|EFG14650.1| asparagine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|295088081|emb|CBK69604.1| asparaginyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
 gi|298512926|gb|EFI36813.1| asparagine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 467

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 58/293 (19%), Positives = 111/293 (37%), Gaps = 25/293 (8%)

Query: 1   MHRY-RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L  +D+G+ V + GWV   R    + F+ + D   I  +    D A F
Sbjct: 1   MEKIGRTKIVDLLKRTDIGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNLQIVVDLANF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +          L   G  +S + E + +     ++E+ A++IE+L   +        ++ 
Sbjct: 61  DE-----EMLKLITTGACISVNGEMVESVGSGQKVEVQAREIEVLGTCDNTYPLQ--KKG 113

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           +      +   L  R +T       R  +  ++      + F    TPI+TAS  EGA  
Sbjct: 114 HSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQ 173

Query: 180 FLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRD 222
               + +N              +  F+    +     Q +  L A+     +   P FR 
Sbjct: 174 MFQVTTMNLYDLKKDERGSISYEDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRA 233

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           E+  + R   EF+ ++ E++F +  D ++  E  ++   +   +       FL
Sbjct: 234 ENSNTPRHLAEFWMIEPEVAFNDITDNMDLAEEFIKYCVKWALDNCADDVKFL 286



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 71/228 (31%), Gaps = 37/228 (16%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL-DMQDGDSCFFIAGDPLKFCSFAA 414
           LA  F +      +       K LN +  + +  RL  +   D       D +K    A 
Sbjct: 263 LAEEFIKYCVKWALDNCADDVKFLNDMFDKGLIERLQGVLKDDFVRLPYTDGIKILEEAV 322

Query: 415 D------------ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
                               E  ++  +      + D+P     +E K        F M 
Sbjct: 323 AKGHKFEFPVYWGVDLASEHERFLVEEHFKRPVILTDYP-----KEIK-------AFYMK 370

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           Q         D  +++A    L     EI  G  R      ++     + I  + +    
Sbjct: 371 QNE-------DGKTVRAMDV-LFPKIGEIIGGSEREADYNKLMTRIEEMHIPMKDMW--- 419

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                  + G  PH G   G +R+++ + G  N+R+V  FP +    D
Sbjct: 420 -WYLDTRKFGTCPHSGFGLGFERLLLFVTGMANIRDVIPFPRTPRNAD 466


>gi|311745878|ref|ZP_07719663.1| asparagine--tRNA ligase [Algoriphagus sp. PR1]
 gi|311302438|gb|EAZ80360.2| asparagine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 483

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 67/283 (23%), Positives = 115/283 (40%), Gaps = 27/283 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEW 69
           L  S VG  V L GWV   R +  + F+ + D   IT  Q+VA+P     +I K   +  
Sbjct: 13  LDESPVGKEVTLMGWVRTKRSNKNVSFIALNDGSTITNYQIVADPTIISEDILKKCATGA 72

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L + G V+        +       EL+A  I++L  A+    P+  +R   E +R +  
Sbjct: 73  CLKVTGTVVESQGAGQAS-------ELNAISIQVLGEADPEKYPLQPKRHSLEFLR-EIA 124

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-- 187
            L +R +T       R  +  ++      + F    TPI+TAS  EGA +    + ++  
Sbjct: 125 HLRMRTNTFSAVFRVRHALAFAVNKYFNDKGFFYIHTPIITASDAEGAGETFKVTTLDLK 184

Query: 188 ------------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                       +  F+   A      Q +  L A      +   P FR E+  + R   
Sbjct: 185 NPPLTKDGDIDYREDFFEREANLTVSGQLEGELAAMALSEIYTFGPTFRAENSNTARHLA 244

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           EF+ ++ EM+F + +D  +  E+ L+ + +   +       FL
Sbjct: 245 EFWMIEPEMAFYDAEDNQDLAEDFLKYIIQYALDNCGSDLEFL 287



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 4/98 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    L     EI  G  R    +V+ Q    + I ++ +          
Sbjct: 385 MRQNDDGKTVAAMDILFPGIGEIVGGSQREERLDVLTQRMEEMNIPQDEMW----WYLDT 440

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + G  PH G   G +R+V+ + G  N+R+V  FP + 
Sbjct: 441 RRFGATPHAGFGLGFERMVLFVTGMSNIRDVIAFPRTP 478


>gi|78394948|gb|AAI07750.1| Aspartyl-tRNA synthetase [Homo sapiens]
          Length = 501

 Score =  190 bits (482), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 87/379 (22%), Positives = 150/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL +      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--------- 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +         
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 118 ----REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                   +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F       N       F      LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    + ++ +    ++F +  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 345 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 394

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 395 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 445

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 446 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501


>gi|302036123|ref|YP_003796445.1| asparaginyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300604187|emb|CBK40519.1| Asparaginyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 430

 Score =  190 bits (482), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 67/292 (22%), Positives = 116/292 (39%), Gaps = 31/292 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRS 67
           D   +  G  V + GW+   R  G + FL +RD  G  Q V +  +     F  +  +  
Sbjct: 7   DEAAAHAGQEVTIRGWLRSRRDKGKLHFLIVRDGTGDIQAVVSKATVGDAQFARSAELTQ 66

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           E  L + G +   +          G  EL   ++++L VAE  P+     +E+      +
Sbjct: 67  ESSLVLTGTLRQDAR-------APGGYELDVLRLDVLQVAESFPIQP---KEHGTGFLME 116

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +R L LR    H  +  R  II + R       F     PI T ++ EG          +
Sbjct: 117 HRHLWLRSSRQHAVLRIRHEIIRACRNFFDDRGFTLVDAPIFTPNACEGTTTLFQTQYFD 176

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + ++  L Q+ Q Y +   A+ F + +   P FR E  ++ R   EF+ ++ E++F +  
Sbjct: 177 ETAY--LTQSGQLYSE-ATAAAFGKVYCFGPTFRAEKSKTRRHLMEFWMVEPEVAFAQLP 233

Query: 248 DILNTMENVLRGVFEEFSNG---------------NTVSNNFLRICYDDAIR 284
           D+++  E  L  +                        V+  F RI Y++AI 
Sbjct: 234 DMMDLAEQFLAHIVAAVLKSRRAELLLLERDPAKLERVTAPFPRITYEEAID 285



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            R H  E +L       +        F       + G  PH G   GI+R V  + G  +
Sbjct: 359 QRIHSHEKLLGRIREHHLPV----EAFQWYLDLRRFGSVPHAGFGMGIERAVAWICGLDH 414

Query: 556 VREVSLFPMS 565
           VRE   FP  
Sbjct: 415 VRETIPFPRM 424


>gi|30584115|gb|AAP36306.1| Homo sapiens aspartyl-tRNA synthetase [synthetic construct]
 gi|61372030|gb|AAX43774.1| aspartyl-tRNA synthetase [synthetic construct]
 gi|61372037|gb|AAX43775.1| aspartyl-tRNA synthetase [synthetic construct]
          Length = 502

 Score =  190 bits (482), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 87/379 (22%), Positives = 150/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL +      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--------- 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +         
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 118 ----REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                   +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F       N       F      LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    + ++ +    ++F +  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 68/181 (37%), Gaps = 37/181 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 345 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 394

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 395 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 445

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 446 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501

Query: 572 L 572
           L
Sbjct: 502 L 502


>gi|258646083|ref|ZP_05733552.1| lysine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260403458|gb|EEW97005.1| lysine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 631

 Score =  190 bits (482), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 74/330 (22%), Positives = 133/330 (40%), Gaps = 31/330 (9%)

Query: 6   THSCGDLGV-----SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           TH   D+          G  V+++G +  +R HG   F  +RD  G  Q+    D+    
Sbjct: 34  THHSEDIHANAAALEASGEHVKVAGRIMIIRGHGKTAFCTLRDEKGDIQLYFRKDTVSEN 93

Query: 61  ---IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
              + K V    +L ++G V             TG+  +      +LS +   PLP    
Sbjct: 94  EWNLFKLVDMGDILGVEGTV---------FTTHTGETTIRVLHFTMLSKSLR-PLPEKWH 143

Query: 118 REYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
               +  R++ R+LDL     + K  +KR  ++ ++R    A  F+E  TP+L       
Sbjct: 144 GLTDKEQRYRQRYLDLIANPDVRKTFIKRANMLQAIRNWYTAHGFLEVETPVLQPLYGGA 203

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+        + Y L  AP+ Y + L+  G++R F+I   FR+E   +   P EF 
Sbjct: 204 NARPFMTHFNALDMTMY-LRIAPELYLKRLLVGGYERIFEITRNFRNEGMDTRHNP-EFT 261

Query: 236 QLDMEMSFVEQDDILNTMENVLRGV---------FEEFSNGNTVSNNFLRICYDDAIRRY 286
            ++   ++ + DD+++  E ++            F        V+  + R+   +A+++Y
Sbjct: 262 AIETYQAYGDIDDVIDQTEQIVAACAMASYGTTKFTYEGTEIDVAGPWPRLTMAEAVKKY 321

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
             +  D    I         +H E+  F  
Sbjct: 322 TGEDFDACKTIEEARAICDRLHVEYGEFDG 351



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 13/131 (9%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMS----- 501
           EE  I   H   T     +  L   D    +   +++    G E+A+G    +       
Sbjct: 365 EEHLIQPVH--ITEHPIEVSPLSKLDPKDPRYTIRFESYIYGRELANGFSELNDPLDQRA 422

Query: 502 --EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             E+ ++   +       ++  F     A + GMPP GG+  G+DR+ ML+  + ++R+V
Sbjct: 423 RFEMQVEEREHGDDEAHPIDEDF---LTALEYGMPPTGGLGIGLDRLFMLMTNSSSIRDV 479

Query: 560 SLFPMSQNFCD 570
            LFP  +   D
Sbjct: 480 LLFPAMRPEGD 490


>gi|254480911|ref|ZP_05094157.1| asparaginyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214038706|gb|EEB79367.1| asparaginyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 465

 Score =  190 bits (482), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 74/401 (18%), Positives = 128/401 (31%), Gaps = 50/401 (12%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           M  + T      G   VGS V + GW+   R    GI FL + D      + A   S   
Sbjct: 1   MSEFTTVVAALKGELAVGSQVMVKGWLRSKRDSKAGISFLAVHDGTAFDAIQAVVPSDLD 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
                V         G  +    E + +      +E+ A ++E++   ++       ++ 
Sbjct: 61  NYESEVLKLS----TGCAVVVCGELVESQGKGQSVEIQATEVEVVGWVDDAETYPIAKKR 116

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           +          L  R +T       RT + N++       +F   +TPILT S  EGA +
Sbjct: 117 HTFEYLRTQAHLRPRTNTFGAITRVRTTLANAIHNYFHDNDFNWINTPILTGSDCEGAGE 176

Query: 180 FLVPSRVN--------------QGSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
               S ++              +  F+A         Q +         + +   P FR 
Sbjct: 177 LFRVSTLDFANLPLDGKGGVNFEEDFFAGESFLTVSGQLEVESYCLAMSKVYTFGPTFRA 236

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV------------ 270
           E+  + R   EF+ ++ E++F + +D  +  E++L+ VF                     
Sbjct: 237 ENSNTSRHLAEFWMVEPEIAFADLNDDADLAESLLKHVFTRILEEREDDMAFFQQRIDKT 296

Query: 271 ---------SNNFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILS 319
                     NNF R+ Y +AI            P+       +EH         ++   
Sbjct: 297 VIDRLRAVIDNNFERMDYSEAITILKKSGKKFEYPVEWGVDMASEHER-----FLAEEHV 351

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
             P   +           R   D     A     PG+  I 
Sbjct: 352 GRPVVVMNYPKDIKAFYMRLNDDEKTVAAMDVLAPGIGEII 392



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 65/193 (33%), Gaps = 20/193 (10%)

Query: 391 LDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG------IINCNCFEFCWIMDFPFYE 444
           L+ ++ D  FF                ++  + +       I+  +  +F + +++    
Sbjct: 279 LEEREDDMAFFQQRIDKTVIDRLRAVIDNNFERMDYSEAITILKKSGKKFEYPVEWGVDM 338

Query: 445 WNEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKAFQYDLVCNGF-EIASGGIR 497
            +E E+ +   H       M          ++ ND     A   D++  G  EI  G  R
Sbjct: 339 ASEHERFLAEEHVGRPVVVMNYPKDIKAFYMRLNDDEKTVA-AMDVLAPGIGEIIGGSQR 397

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               +V+             +           + G  PH G   G +R++  + G +NVR
Sbjct: 398 EERLDVLDARMDEH------LREELWWYRDLRRYGTVPHAGFGLGFERLLNYVTGMENVR 451

Query: 558 EVSLFPMSQNFCD 570
           +   FP +    D
Sbjct: 452 DAIPFPRTPGNAD 464


>gi|225864167|ref|YP_002749545.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|225786637|gb|ACO26854.1| aspartate--tRNA ligase [Bacillus cereus 03BB102]
          Length = 432

 Score =  190 bits (482), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A F 
Sbjct: 5   MKRSLTKEC----TEKSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGF- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++  
Sbjct: 60  ---KVDVESIVHVIGEIVETSKTEL-------GVEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/164 (29%), Positives = 68/164 (41%), Gaps = 28/164 (17%)

Query: 406 PLKFCSFA--ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
             K+C  +   D      + LG      +  EF +I  +P             A   +TM
Sbjct: 287 KSKYCKESPVGDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTM 335

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P     S+  +         +DL+  G EI SG  R H  E++L +F   G+      ++
Sbjct: 336 PNNENSSITDS---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DK 382

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           F      F+ G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 383 FQSYLNTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|325299015|ref|YP_004258932.1| Asparaginyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324318568|gb|ADY36459.1| Asparaginyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 467

 Score =  190 bits (482), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 60/295 (20%), Positives = 111/295 (37%), Gaps = 29/295 (9%)

Query: 1   MHRYR-THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M + R T     L   D G+ V + GWV   R    + F+ + D   I  V    D A F
Sbjct: 1   MEKIRRTKIVDLLKCRDFGTMVNVRGWVRTRRGSKQVSFIALNDGSTINNVQIVVDLANF 60

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+ K + +   L ++G+++        A       E+ A++IE+L V +        +
Sbjct: 61  DEELLKQITTGACLSVNGILVESVGAGQAA-------EIQAREIEVLGVCDNTYPLQ--K 111

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           + +      +   L  R +T       R  +  ++        F    TP++TAS  EGA
Sbjct: 112 KGHSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPLITASDCEGA 171

Query: 178 RDFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
                 + +N                 F+    +     Q +  L A+     +   P F
Sbjct: 172 GQMFQVTTMNLYDLKKDENGSIIYDNDFFGKQASLTVSGQLEGELAATALGAIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F + +D ++  E  ++   +   +       FL
Sbjct: 232 RAENSNTPRHLAEFWMIEPEVAFNDINDNMDLAEEFIKYCVQWALDNCYDDVKFL 286



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P     +E K        F M Q         D  +++A  
Sbjct: 342 HERYLVEEHFKRPVILTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 382

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R    + +L     + I  + +           + G  PH G   
Sbjct: 383 V-LFPKIGEIIGGSEREADYDKLLTRIKELNIPMKDMW----WYLDTRKYGTCPHSGFGL 437

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G  N+R+V  FP + +
Sbjct: 438 GFERLLLFVTGMANIRDVIPFPRTPH 463


>gi|298480190|ref|ZP_06998388.1| asparagine--tRNA ligase [Bacteroides sp. D22]
 gi|298273471|gb|EFI15034.1| asparagine--tRNA ligase [Bacteroides sp. D22]
          Length = 467

 Score =  190 bits (482), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 58/293 (19%), Positives = 111/293 (37%), Gaps = 25/293 (8%)

Query: 1   MHRY-RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L  +D+G+ V + GWV   R    + F+ + D   I  +    D A F
Sbjct: 1   MEKIGRTKIVDLLKRTDIGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNLQIVVDLANF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +          L   G  +S + E + +     ++E+ A++IE+L   +        ++ 
Sbjct: 61  DE-----EMLKLITTGACISVNGEMVESVGSGQKVEVQAREIEVLGTCDNTYPLQ--KKG 113

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           +      +   L  R +T       R  +  ++      + F    TPI+TAS  EGA  
Sbjct: 114 HSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQ 173

Query: 180 FLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRD 222
               + +N              +  F+    +     Q +  L A+     +   P FR 
Sbjct: 174 MFQVTTMNLYDLKKDERGSISYEDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRA 233

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           E+  + R   EF+ ++ E++F +  D ++  E  ++   +   +       FL
Sbjct: 234 ENSNTPRHLAEFWMIEPEVAFNDITDNMDLAEEFIKYCVKWALDNCADDVKFL 286



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 73/232 (31%), Gaps = 45/232 (19%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL-DMQDGDSCFFIAGDPLKFCSFAA 414
           LA  F +      +       K LN +  + +  RL  +   D       D +K    A 
Sbjct: 263 LAEEFIKYCVKWALDNCADDVKFLNDMFDKGLIERLQGVLKDDFVRLPYTDGIKILEEAV 322

Query: 415 DARNHIAQELGIINCNCFEF--CWIMDFPFYEWNEEEKKIDFAHN--------------P 458
                          + FEF   W +D      +E E+ +   H                
Sbjct: 323 A------------KGHKFEFPVYWGVDL----ASEHERFLVEEHFKRPVILIDYPKEIKA 366

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F M Q         D  +++A    L     EI  G  R      ++     + I  + +
Sbjct: 367 FYMKQNE-------DGKTVRAMDV-LFPKIGEIIGGSEREADYNKLMTRIEEMHIPMKDM 418

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                      + G  PH G   G +R+++ + G  N+R+V  FP +    D
Sbjct: 419 W----WYLDTRKFGTCPHSGFGLGFERLLLFVTGMANIRDVIPFPRTPRNAD 466


>gi|45439306|ref|NP_001340.2| aspartyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|20178330|sp|P14868|SYDC_HUMAN RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; AltName:
           Full=Cell proliferation-inducing gene 40 protein
 gi|12653689|gb|AAH00629.1| Aspartyl-tRNA synthetase [Homo sapiens]
 gi|30582259|gb|AAP35356.1| aspartyl-tRNA synthetase [Homo sapiens]
 gi|60655171|gb|AAX32149.1| aspartyl-tRNA synthetase [synthetic construct]
 gi|60655173|gb|AAX32150.1| aspartyl-tRNA synthetase [synthetic construct]
 gi|119632022|gb|EAX11617.1| aspartyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|119632025|gb|EAX11620.1| aspartyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|123979676|gb|ABM81667.1| aspartyl-tRNA synthetase [synthetic construct]
 gi|123994473|gb|ABM84838.1| aspartyl-tRNA synthetase [synthetic construct]
 gi|158254646|dbj|BAF83296.1| unnamed protein product [Homo sapiens]
          Length = 501

 Score =  190 bits (482), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 87/379 (22%), Positives = 150/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL +      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--------- 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +         
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 118 ----REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                   +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F       N       F      LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    + ++ +    ++F +  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 345 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 394

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 395 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 445

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 446 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501


>gi|51891663|ref|YP_074354.1| lysyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|51855352|dbj|BAD39510.1| lysyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 495

 Score =  190 bits (482), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 64/269 (23%), Positives = 116/269 (43%), Gaps = 16/269 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R++G V  VR HG I F  ++D  G  Q+         E+++  R  W     G ++   
Sbjct: 60  RVAGRVVTVRSHGKIGFAHLQDGSGRLQIYLR----LPELSERERLVWEHLDLGDIV--G 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHK 140
           AE +     TG++ +  + + +L+ A   PLP          +R++ R LDL        
Sbjct: 114 AEGVLMRTRTGELTVKVESLTMLTKALR-PLPDKHAGLRDVELRYRERHLDLLVNPESRA 172

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
               R+RI+ S+R  +    FIE  TP+L   +    AR FL           +L  A +
Sbjct: 173 VFEARSRIVASLRRTLDELGFIEVETPVLVPLAGGAAARPFLTYHNALDRQL-SLRIATE 231

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + L+  G +R ++I   FR+E   +   P EF  L+   ++ +  D+++  E +++ 
Sbjct: 232 LHLKRLVVGGMERVYEIGRVFRNEGLSTRHNP-EFTSLEAYQAYADYRDMMDLTERLVQN 290

Query: 260 VFEEFS-----NGNTVSNNFLRICYDDAI 283
                +         ++  F RI   +A+
Sbjct: 291 AARAVNGSLRAGEIDLTGPFRRITMAEAV 319



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 7/132 (5%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGN-DLLSIKAFQYDLVCNGFEIASGGIRNHM 500
            +E   E++ +          +    + +   D       +++L   G EIA+     + 
Sbjct: 366 LFERYAEDRLVQPTFVLGHPVETSPLARRDPRDPR--LTERFELYVQGREIANAFSELND 423

Query: 501 SEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
            E   + F      ++  +            A + G+PP GG+  G+DR+VMLL GA ++
Sbjct: 424 PEDQRRRFEAQLAQRQAGDEEAHPMDEDFLAALEVGLPPTGGLGIGVDRLVMLLTGAPSI 483

Query: 557 REVSLFPMSQNF 568
           R+V LFP  +N 
Sbjct: 484 RDVILFPTMRNR 495


>gi|327398508|ref|YP_004339377.1| Lysyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181137|gb|AEA33318.1| Lysyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 503

 Score =  190 bits (482), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 63/253 (24%), Positives = 120/253 (47%), Gaps = 11/253 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + D+  +V+++G V   R  G   FL ++D  G  QV A   S   +  K  +   +  I
Sbjct: 58  LEDLCKYVKVAGRVMAYRSFGKAGFLKLKDFTGTIQVYAEKKSLSEDDFKLYKKLDIGDI 117

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      E       TG++ + A++I +L+ +   PLP        + +R++ R++DL
Sbjct: 118 IGV------EGELFKTKTGELTVKAKRIVMLTKSLR-PLPEKWHGLKDKELRYRQRYVDL 170

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   + +V  R+ IIN++R  MI   FIE  TP+L    +   A+ F+        + 
Sbjct: 171 IVNDQTRQMVIERSLIINAVREFMIKSRFIEVETPMLHKLVTGAAAKPFVTHLNALDMTL 230

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  G +R F+I   FR+E       P EF  ++  +++ + + +++
Sbjct: 231 Y-LRIAPELYLKRLVVGGLERIFEINRNFRNEGMDLKHNP-EFTMMEFYIAYKDYNFLMD 288

Query: 252 TMENVLRGVFEEF 264
             E +   + ++ 
Sbjct: 289 FTEELFEYILDKL 301



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/301 (15%), Positives = 90/301 (29%), Gaps = 45/301 (14%)

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +  Y    P+L    ++    E          ++ + +    E   +       +  F  
Sbjct: 228 MTLYLRIAPELYLKRLVVGGLERIFEINRNFRNEGMDLKHNPEFTMMEFYIAYKDYNFLM 287

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNI-VNTEAIRVRLDMQDGDSCFF 401
              E         L     +++  GN        + L+     + I        GD    
Sbjct: 288 DFTEELFEYILDKLGIDDRKIEFDGNTIDFSRPWRRLDFYEGLKEI-----AGVGDDIL- 341

Query: 402 IAGDPLKFCSFAADARNH----------IAQELG-IINCNCFEFCWIMDFPFYEWNEEEK 450
              D  K   +A                +A+    ++        +++ +P         
Sbjct: 342 --NDKKKALEYALKLEKSVDDSFSHEKILAEIFDALVEPKLINPTFVVGYP--------- 390

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF-- 508
               A +P         ++           +++L     EIA+     +      + F  
Sbjct: 391 ---VAISPLAKRNRDNPNITD---------RFELYIGTMEIANAFSELNDPFDQKERFLN 438

Query: 509 --SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                    E          +A + G+PP  G   GIDR+VMLL G  ++R+V LFP+ +
Sbjct: 439 QLEERKKGDEEASMYDEDYIKALEYGLPPTAGEGIGIDRLVMLLTGNSSIRDVILFPLMR 498

Query: 567 N 567
           +
Sbjct: 499 D 499


>gi|228927265|ref|ZP_04090327.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228832412|gb|EEM77987.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 432

 Score =  190 bits (482), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A F 
Sbjct: 5   MKRSLTKEC----TEKSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGF- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++  
Sbjct: 60  ---KVDVESIVHVIGEIVETSKTEL-------GVEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 48/164 (29%), Positives = 68/164 (41%), Gaps = 28/164 (17%)

Query: 406 PLKFCSFA--ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
             K+C  +   D      + LG      +  EF +I  +P             A   +TM
Sbjct: 287 KSKYCKESPVGDLDTEGEKLLGKYVNETYKSEFVFITHYP-----------KEARPMYTM 335

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P     S+  +         +DL+  G EI SG  R H  E++L +F   G+      ++
Sbjct: 336 PNNENSSITDS---------FDLLYKGLEITSGAQRIHNYEMLLDSFKEKGLHP----DK 382

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           F      F+ G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 383 FQSYLNTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|328758223|gb|EGF71839.1| lysyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
          Length = 1081

 Score =  190 bits (482), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 102/563 (18%), Positives = 177/563 (31%), Gaps = 120/563 (21%)

Query: 7    HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626  HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67   SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                L    +       + N     G + L      + + +             PE  + 
Sbjct: 686  HAVSLGDHFVATGTVGASRN-----GTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127  KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
            + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740  RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185  RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   Y L  AP+ Y + LM  G          F                        
Sbjct: 800  NAYDLDLY-LRIAPELYLKRLMVGGA------GRVF------------------------ 828

Query: 245  EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                           +   F N    + +       +A + YG         + M ++T 
Sbjct: 829  --------------EIGRNFRNEGADATHNPEFTMLEAYQAYGDY-------VQMRHLTR 867

Query: 305  HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                    + S   +   G  V     KG        D  NE           +    ++
Sbjct: 868  EM------ILSAARNATGGTVVRGRDRKGVEH---EIDLANE-----------WHVITVN 907

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            E         +++ L    T        +   +                 +   H+++ +
Sbjct: 908  EG--------ISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSEHV 959

Query: 425  GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                    E  +  DFP               +P T        L         A ++DL
Sbjct: 960  ------TVEPTFFCDFP------------TDVSPLTRQHRDDPRL---------AEKWDL 992

Query: 485  VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +  G E+ +         +  + F+   +                  A +  MPP GG+ 
Sbjct: 993  IIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMG 1052

Query: 541  AGIDRIVMLLLGAKNVREVSLFP 563
             G+DR+VM+L  A ++RE   FP
Sbjct: 1053 MGLDRLVMMLTNA-SIRETISFP 1074


>gi|256844418|ref|ZP_05549904.1| lysyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256849194|ref|ZP_05554627.1| lysyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262047210|ref|ZP_06020168.1| lysyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|256613496|gb|EEU18699.1| lysyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256713970|gb|EEU28958.1| lysyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260572455|gb|EEX29017.1| lysyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 511

 Score =  189 bits (481), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 64/321 (19%), Positives = 121/321 (37%), Gaps = 20/321 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L         +++G +   R  G + F D+ D  G  Q+    D    + 
Sbjct: 39  EKYGNEDKEELNADMP--KTKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDN 96

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  +   +    G+      E       TG++ + A  +  LS A   PLP        
Sbjct: 97  YKIFKKSDIGDFLGI------EGEVMKTDTGELTIRALHVTFLSKALR-PLPDKYHGLKD 149

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
               ++ R+LDL  +         RT+II ++R  +  +NF+E  TP+L        AR 
Sbjct: 150 VEAIYRQRYLDLITNHDSYMRFVHRTQIIQAIRDYLNGQNFLEVETPVLHNIPGGAEARP 209

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+        + Y +  A +   + L+    +R ++I   FR+E   +   P EF +L+ 
Sbjct: 210 FITHHNALDINLY-MRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELES 267

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PD 292
             ++ +  D+++  E ++R   +  S+   ++     I      RR             D
Sbjct: 268 YAAYWDYHDVMDEAEGIIRAAAKVVSDDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVD 327

Query: 293 LRNPIIMHNVTEHFVHSEFRV 313
              P+ +   T+     +  V
Sbjct: 328 FWKPMTLEEATKIAEDHDIHV 348



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 113/348 (32%), Gaps = 26/348 (7%)

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGV-FEEF-----SNGNTVSNNFLRICYDDA 282
           R        D  M FV +  I+  + + L G  F E       N    +     I + +A
Sbjct: 157 RYLDLITNHDSYMRFVHRTQIIQAIRDYLNGQNFLEVETPVLHNIPGGAEARPFITHHNA 216

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +      +  L  P+    V +     E     +   ++  +       +       + D
Sbjct: 217 LDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNPEFTELESYAAYWDYHD 276

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            M+E                + + G +   G             +   +  + G   +  
Sbjct: 277 VMDEAEGIIRAAAKV-----VSDDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVDFW-- 329

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
              P+            IA++  I     ++   I++  F+E   EE  +D         
Sbjct: 330 --KPMTLEEA-----TKIAEDHDIHVEKFWKVGHIINA-FFEKYCEETIVDPTFVYGHPV 381

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           +    + K  D       ++++   G E  +     +  +   + F      +E   +  
Sbjct: 382 EISPLAKKNAD-DPRFTDRFEIYIMGEEYGNAFSELNDPDDQRERFEAQMEEREAGNDEA 440

Query: 523 G----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                   RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 441 DMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 488


>gi|196034019|ref|ZP_03101430.1| aspartyl-tRNA synthetase [Bacillus cereus W]
 gi|228945810|ref|ZP_04108156.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|195993699|gb|EDX57656.1| aspartyl-tRNA synthetase [Bacillus cereus W]
 gi|228813875|gb|EEM60150.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 432

 Score =  189 bits (481), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A F 
Sbjct: 5   MKRSLTKEC----TEKSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGF- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++  
Sbjct: 60  ---KVDVESIVHVIGEIVETSKTEL-------GVEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/164 (29%), Positives = 69/164 (42%), Gaps = 28/164 (17%)

Query: 406 PLKFCSFA--ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
             K+C  +   D      + LG      +  EF +I+ +P             A   +TM
Sbjct: 287 KSKYCKESPVGDLDTEGEKLLGKYVKETYKSEFVFIIHYP-----------KEARPMYTM 335

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P     S+  +         +DL+  G EI SG  R H  E++L +F   G+      ++
Sbjct: 336 PNNENSSITDS---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DK 382

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           F      F+ G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 383 FQSYLNTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|229918735|ref|YP_002887381.1| asparaginyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229470164|gb|ACQ71936.1| asparaginyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 435

 Score =  189 bits (481), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 78/318 (24%), Positives = 124/318 (38%), Gaps = 33/318 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCID 74
           G  VR+  W+   R  G I FL +RD  G      V A+     F +AK +  E  + + 
Sbjct: 16  GQSVRVGAWIANKRSSGKIAFLQLRDGSGFAQAVVVKADVAEELFTLAKGITQETSVWVT 75

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V S    T          EL    +E+++ + + P+     +E+        R L LR
Sbjct: 76  GNVKSDGGRT------PLGFELEVTDLEVIAESVDYPITP---KEHGTEFLMDNRHLWLR 126

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
               H  +  R  II +       E F++   PILT+S+PEG  +        Q ++  L
Sbjct: 127 SRRQHAIMKVRNEIIRATYEFFNKEGFVKIDPPILTSSAPEGTTELFETDYFGQSAY--L 184

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q  Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+FV+ D  L   E
Sbjct: 185 SQTGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVDHDMNLEIQE 243

Query: 255 NVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRY---GTDKPDLRNP 296
             +  + +               +      V   F R+ Y+DAI+     G D  +  + 
Sbjct: 244 QYVSYIAQSALANCKNELELLGRDLEKLAQVQAPFPRVRYEDAIKFLKAEGFDDIEYGDD 303

Query: 297 IIMHNVTEHFVHSEFRVF 314
               + T      +  VF
Sbjct: 304 FGAPHETAIANAHDQPVF 321



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 54/167 (32%), Gaps = 26/167 (15%)

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFE-----FCWIMDFPFYEWNEEEKKIDFAHN 457
             D +KF             + G  +            +I  +P     +E K      +
Sbjct: 283 YEDAIKFLKAEGFDDIEYGDDFGAPHETAIANAHDQPVFITHWP-----KEIKPFYMKVD 337

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           P        E +   DL++ + +         EI  G  R    + + +     G+ +  
Sbjct: 338 P-----ENPELVLCADLIAPEGYG--------EIIGGSQREDDYDRLKEEIIKEGLDETD 384

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
               +       Q G  PH G   G++R V  + G +++RE   FP 
Sbjct: 385 A---YDWYLELRQYGSVPHSGFGLGLERTVAWISGIEHIREAIPFPR 428


>gi|229013760|ref|ZP_04170888.1| Asparaginyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228747429|gb|EEL97304.1| Asparaginyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 463

 Score =  189 bits (481), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 133/372 (35%), Gaps = 61/372 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
               V++SGW+  +R      F+++ D       Q+V + +   F+    +     + ++
Sbjct: 17  ADQTVQVSGWIRNLRDSKAFGFIELNDGSFFKGVQIVFDTELENFKEIAKLPLSSSVKVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V++               E+ A+KI+I  +++    P+  +R   E +R     L  R
Sbjct: 77  GKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+   TPI+T S  EGA +    +  +       
Sbjct: 128 TNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVAKG 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+A         Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGQVDESKDFFAKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E  D+++  E++L+   +          +F                      R
Sbjct: 248 EPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVINSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           I Y +AI+       + + P+   +   TEH  +    +F + + V    +         
Sbjct: 308 ITYTEAIKVLQESGAEFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI------- 360

Query: 335 GGNRAFCDRMNE 346
              +AF  RMNE
Sbjct: 361 ---KAFYMRMNE 369



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGAEFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M           D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMRMNE-------DGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|229062242|ref|ZP_04199564.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717070|gb|EEL68749.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 463

 Score =  189 bits (481), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 133/372 (35%), Gaps = 61/372 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
               V++SGW+  +R      F+++ D       Q+V + +   F+    +     + ++
Sbjct: 17  ADQTVQVSGWIRNLRDSKAFGFIELNDGSFFKGVQIVFDTELENFKEIAKLPLSSSVKVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V++               E+ A+KI+I  +++    P+  +R   E +R     L  R
Sbjct: 77  GKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+   TPI+T S  EGA +    +  +       
Sbjct: 128 TNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVPKG 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+A         Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGQVDESKDFFAKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E  D+++  E++L+   +          +F                      R
Sbjct: 248 EPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVINSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           I Y +AI+       + + P+   +   TEH  +    +F + + V    +         
Sbjct: 308 ITYTEAIKVLQESGAEFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI------- 360

Query: 335 GGNRAFCDRMNE 346
              +AF  RMNE
Sbjct: 361 ---KAFYMRMNE 369



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGAEFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M           D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMRMNE-------DGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|87310517|ref|ZP_01092646.1| asparaginyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87286738|gb|EAQ78643.1| asparaginyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 463

 Score =  189 bits (481), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 55/280 (19%), Positives = 105/280 (37%), Gaps = 22/280 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           L    VG+ V+L GWV   R    G  F+++ D   +  +    D A       V+    
Sbjct: 10  LSADQVGNQVKLEGWVRTRRDSKAGFSFIELNDGSCMGNIQVVADGALTNYESEVKKLSA 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               G  +    E + +       E+ A ++ +   A+    P+  +R   E +R ++  
Sbjct: 70  ----GCSVRILGEIVASQGKGQTTEIQASEVHVYGWADPESYPLQKKRHSMEKLR-EWAH 124

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R  +  S+        F+   TPI+TAS  EGA +    + ++   
Sbjct: 125 LRPRTNTFGAVFRVRNCVSRSIHNFFQERGFLYVHTPIITASDCEGAGEMFKVTTLDLDA 184

Query: 190 ------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   +      Q +  + A+     +   P FR E+  + R   EF
Sbjct: 185 PPKTGGKVDYTQDFFERPSYLTVSGQLEGEIFATALGNVYTFGPTFRAENSNTSRHLAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           + ++ EM+FV+ +  +   E+ ++ +  +          F
Sbjct: 245 WMVEPEMAFVDLEGNMQVAEDFIKRIISDVMRDCGDDLQF 284



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 42/120 (35%), Gaps = 12/120 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                  PF M           D  +++A    L     EI  G  R    +V+ Q    
Sbjct: 355 DYPRTIKPFYMRCND-------DGKTVRAMDV-LAPKVGEIIGGSQREERLDVLEQRMQE 406

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G++               + G  PH G   G++RI+  + G  N+R+V  FP +    D
Sbjct: 407 QGLNPADYW----WYVELRKYGTIPHSGFGLGLERILQFITGMGNIRDVIPFPRTPGSAD 462


>gi|28377434|ref|NP_784326.1| lysyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254555617|ref|YP_003062034.1| lysyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300768967|ref|ZP_07078858.1| lysine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308179647|ref|YP_003923775.1| lysyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|38258343|sp|Q88Z28|SYK_LACPL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|28270266|emb|CAD63167.1| lysine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254044544|gb|ACT61337.1| lysyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300493488|gb|EFK28665.1| lysine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308045138|gb|ADN97681.1| lysyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 499

 Score =  189 bits (481), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 61/320 (19%), Positives = 126/320 (39%), Gaps = 29/320 (9%)

Query: 2   HRY-RTHSCGDLGVS---------DVGSFV-RLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RT    DL            D    V  ++G +   R  G + F DI D  G  Q+
Sbjct: 32  HRFERTDLAQDLQDKYGDMDKDELDAKQVVATIAGRMLAKRGKGKVGFADIWDRSGKMQL 91

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    +     +   +    G  +  + +    +   G++ +    +  LS A   
Sbjct: 92  YIRKDVVGEDTYHIFKRSDI----GDFLGITGQVFKTDF--GELTIKVTGLTFLSKALR- 144

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL 169
           PLP            ++ R+LDL  +    +   KRT+II+++R  +  + F E  TP+L
Sbjct: 145 PLPDKFHGLQNVEQIYRQRYLDLISNRDSFDRFLKRTKIISAIRHHLDDQGFTEVETPML 204

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    AR F+          Y L  A + + + L+  G ++ ++I   FR+E    +
Sbjct: 205 HNQAGGAAARPFVTHHNALNIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGMDRE 263

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  ++  +++ +  D++   E + +   +  ++   V+ +  ++ ++   ++   
Sbjct: 264 HNP-EFTMMETYVAYFDFHDVMAETEGIFKAAAQAVTDDGIVTYHDQKVDFNQPFKQIHM 322

Query: 289 DKP-------DLRNPIIMHN 301
                     D   P+ + +
Sbjct: 323 VDAIKEKTGIDFWQPMSIED 342



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A E  +     ++   I++  F E+ E+   ++     +  P       K N+    
Sbjct: 344 QKLADEHHVKYEPYWKVGHIINAFFEEFVEDT--LNEPTFVYGHPVEISPLAKKNEEDPR 401

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGM 533
              +++L   G E A+     +      Q F      +    +  E+       A + GM
Sbjct: 402 FTDRFELFILGNEYANAFSELNDPIDQRQRFEAQAAERTAGNDEAEHIDEDFVEALEYGM 461

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PP GG+  GIDR+VML+  A ++R+V LFP  +   D
Sbjct: 462 PPTGGLGIGIDRLVMLMTDADSIRDVLLFPTMRPEED 498


>gi|157363790|ref|YP_001470557.1| asparaginyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|157314394|gb|ABV33493.1| asparaginyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 431

 Score =  189 bits (481), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 80/327 (24%), Positives = 127/327 (38%), Gaps = 32/327 (9%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKS 64
              DL    +G  V L GWV  +R  G I FL  RD  G  QVV          FE+A  
Sbjct: 4   YVEDL-KDYIGQEVELRGWVWNIRSSGKIHFLQFRDGTGFVQVVVERSDVGEEVFEVASK 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R E  + I G ++               +E+ A+ I  + + EE       ++++    
Sbjct: 63  LRIESSVIIRGKIVEDRRSPY-------GVEVHAKGIVPVQIPEEPYP--ISKKDHGIDF 113

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              YR L LR       +  R  ++ ++R      NF+   TPI T +  E A +     
Sbjct: 114 LMSYRHLWLRSRRQFHILKVRDAMLTAIRQFYRQRNFVLIDTPIFTGAIGESAGNLFELD 173

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             + G  Y L Q  Q Y +      F + + + P FR E  ++ R   EF+  + E+++ 
Sbjct: 174 YFDYGKVY-LTQTGQLYLEAA-CMAFGKVYNLGPTFRAEKSKTRRHLIEFWMHEAEVAYY 231

Query: 245 EQDDILNTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTD 289
           E +D L   E ++  + +               + S    V   F RI YD+AI+    +
Sbjct: 232 EHEDNLRLQEELVSYIVKYVLDNALEHLIALGRDVSKLEKVCVPFERITYDEAIKLLQKN 291

Query: 290 KPDLRNPIIM--HNVTEHFVHSEFRVF 314
             D+R          T    + E  VF
Sbjct: 292 GSDIRWGDDFGGDEETIIASNFEKPVF 318



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 26/147 (17%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM--ESLKGNDLLSIK 478
             E  II  N  +  ++  +P                 F M       E +   DLL+ +
Sbjct: 303 GDEETIIASNFEKPVFVTHYP------------RKAKAFYMQPDPHKPEVVLCGDLLAPE 350

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
            +         EI  G  R H   ++L   +   +     E+++       + G  PH G
Sbjct: 351 GYG--------EIIGGSQRIHDYNLLLDRLNEFNLP----EDKYQWYLDLRKWGSVPHSG 398

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMS 565
              GI+R V  + G +++RE   F  +
Sbjct: 399 FGLGIERTVAWICGLEHIRESIPFART 425


>gi|313901753|ref|ZP_07835180.1| asparaginyl-tRNA synthetase [Thermaerobacter subterraneus DSM
           13965]
 gi|313467989|gb|EFR63476.1| asparaginyl-tRNA synthetase [Thermaerobacter subterraneus DSM
           13965]
          Length = 430

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 69/296 (23%), Positives = 118/296 (39%), Gaps = 28/296 (9%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIA 62
           T +   +G  + G  V L+GWV+  R  G I FL +RD  G+ Q V   D       E  
Sbjct: 2   TVTVAQVGRFE-GQEVELAGWVYNRRSSGRIAFLLLRDGTGVIQCVITRDRAGEQGLETF 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+  E    + G+V +            G  EL   ++E + VAE+ P      +E+  
Sbjct: 61  ASLTQESSCRVWGVVRADRR-------APGGYELDVTRLEPVHVAEDYP---IKLKEHGV 110

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                +R L +R    +  +  R  ++ +    +  E F+    PILT S+PEG  +   
Sbjct: 111 DFLMDHRHLWIRTPRQNAVLRVRAAVMQAAAEVLAEEGFVRVDAPILTPSAPEGTTNLFE 170

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                + ++  L Q+ Q Y +        + + + P FR E  ++ R   EF+ L+ E +
Sbjct: 171 TDYFGEKAY--LSQSGQLYMEAA-CMALGKVYCLGPTFRAEQSKTRRHLLEFWMLEPEAA 227

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           F   +D +   E ++RG+     +                +   G D   LR  + 
Sbjct: 228 FFTHEDNVALQERLVRGIVLRVLDQ-----------CARELETLGRDPETLRREVE 272



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 66/226 (29%), Gaps = 49/226 (21%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD----ARNHIA-- 421
               + P A      +  A++ RL               L+            R  +   
Sbjct: 218 EFWMLEPEAAFFTHEDNVALQERLVRGIVLRVLDQCARELET---LGRDPETLRREVEAP 274

Query: 422 -------QELGIINCNCFEFCWIMDF--------------PFYEWNEEEKKIDFAHNPFT 460
                    L I++       W  DF              P +      ++       F 
Sbjct: 275 FVRISYDDALRILDRQGLGLPWGEDFGAPHETALSEHFGRPVFV-----ERFPAQVKAFY 329

Query: 461 MPQGG--MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           M       E     DLL+ + +         EI  G  R    +++L+     G+S++  
Sbjct: 330 MEPDPERPEVALCADLLAPEGYG--------EIIGGSQRISDLDLLLRRIDEHGLSRQA- 380

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                      + G  PH G   GI+R V  + G ++VRE   FP 
Sbjct: 381 ---LAWYIDLRRYGSVPHSGFGLGIERTVAWICGLEHVREAIPFPR 423


>gi|237741501|ref|ZP_04571982.1| lysyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229429149|gb|EEO39361.1| lysyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 493

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 61/314 (19%), Positives = 124/314 (39%), Gaps = 16/314 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + +G +  +R  G + F  I D  G  Q+    D    E    +     +   G ++   
Sbjct: 57  KTAGRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNV---GDIIGLE 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E    +  T ++ L  + I +L+      LP          IR++ R++DL  +   ++
Sbjct: 114 GELFITH--TEELTLRVKSIALLTK-NVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRD 170

Query: 142 -IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQ 199
             +KRT+II ++R  +    F+E  TPI+        A+ F+          Y L  AP+
Sbjct: 171 TFIKRTKIIKAIRKYLDDRGFLEVETPIMHPILGGAAAKPFITHHNTLNIDLY-LRIAPE 229

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R + +   FR+E   +   P EF  +++  +  +  D+++  E ++  
Sbjct: 230 LYLKKLIVGGFERVYDLNRNFRNEGISTRHNP-EFTMVELYQAHADFHDMMDLCEGIISS 288

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP------DLRNPIIMHNVTEHFVHSEFRV 313
           V +E +    +  + +++   +  R +  D        D    +      +        V
Sbjct: 289 VCQEVNGTTDIEYDGVKLSLKNFARVHMVDMIKEVTGVDFWKEMTFEEAKQIAKEHHIEV 348

Query: 314 FSKILSVNPGYEVW 327
              + SV      +
Sbjct: 349 ADHMNSVGHIINEF 362



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + +  D  +    +++L  N  E A+     +  
Sbjct: 362 FFEQKCEEKVIQPTFVYGHPVEISPLAKRNEDNPNF-TDRFELFINKREYANAFTELNDP 420

Query: 502 EVML-----QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                    Q    +  ++E           A + G+PP GG+  GIDR+VMLL GA ++
Sbjct: 421 ADQRGRFESQVEEAMHGNEEATPEIDESFVEALEYGLPPTGGLGIGIDRLVMLLTGAPSI 480

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 481 RDVILFPQMK 490


>gi|153822306|ref|ZP_01974973.1| lysyl-tRNA synthetase [Vibrio cholerae B33]
 gi|126520202|gb|EAZ77425.1| lysyl-tRNA synthetase [Vibrio cholerae B33]
          Length = 469

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 64/292 (21%), Positives = 132/292 (45%), Gaps = 25/292 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G V   R      FL I++  G  Q  A+      E+ + ++ ++    
Sbjct: 66  LEALNHVVSIAGRVMAKRGP----FLVIQETSGRIQAYASK-----EVQQELKDKYQGLD 116

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++        +    G + ++ ++ ++L+ A   PLP        + +R++ R++DL
Sbjct: 117 IGDIIGVQGALHKSG--KGDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 173

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  + R+++++++R  MI++ F+E  TP++        AR F+          
Sbjct: 174 IVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPM 233

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++
Sbjct: 234 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMD 291

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
             E +L  V  E     ++            + R+   DAI+ Y  +   ++
Sbjct: 292 LTEELLSSVALEVLGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQ 343


>gi|179102|gb|AAA35567.1| aspartyl-tRNA synthetase [Homo sapiens]
          Length = 500

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 89/379 (23%), Positives = 151/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL +      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 49  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 108

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +   PE    
Sbjct: 109 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEQEGE 166

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 167 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 226

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 227 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 284

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F       N       F      LR
Sbjct: 285 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 344

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    + ++ +    ++F +  K  L+V P Y + 
Sbjct: 345 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMP 404

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 405 DPRNPKQSKSYDMFMRGEE 423



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 344 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 393

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 394 PLAVRPFYTM---------PDPRNPKQSKSYDMFMRGEEILSGAQRIHDPQLLTERALHH 444

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G        +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 445 GNDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 500


>gi|15966657|ref|NP_387010.1| lysyl-tRNA synthetase protein [Sinorhizobium meliloti 1021]
 gi|307300308|ref|ZP_07580088.1| lysyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307319591|ref|ZP_07599017.1| lysyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|17380505|sp|O87821|SYK_RHIME RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|15075929|emb|CAC47483.1| Lysyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306894713|gb|EFN25473.1| lysyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306904474|gb|EFN35058.1| lysyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 498

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 60/293 (20%), Positives = 124/293 (42%), Gaps = 20/293 (6%)

Query: 2   HRYRTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +L          ++ G  V ++G V   R  G  +F+D+ D  G  Q+ ++
Sbjct: 36  HFHRTLTNAELAEKYAGLEPDTESGETVTVAGRVFSSRNSG--MFMDLHDASGKIQIFSH 93

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D+A  E    +    +    G ++  + E        G++ ++A++I +L  +  LP+P
Sbjct: 94  KDTAPEEARALLPMIDL----GDIIGVTGEVRRTK--RGELTVNAKEITMLCKSL-LPMP 146

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                      R++ R+LD+  +   K    +R+RI++S+R  +  E F+E  TP+L   
Sbjct: 147 EKYHGLADIETRYRKRYLDIMVNEESKLRFQQRSRIVSSLRRFLEDEGFMEVETPMLQPI 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLP 231
                 +              L  AP+ Y + ++ SG  D+ F+I   FR+E   +   P
Sbjct: 207 YGGATAEPFKTHHNTLKLDMYLRIAPELYLKRILVSGLTDKVFEINRNFRNEGVSTRHNP 266

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            EF  ++   ++ + +D++  +E +   +               ++ +     
Sbjct: 267 -EFTMMECYWAYADYEDVMGLVERMFETLALAVHGKTEFEFGDKQLSFKGPFP 318



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 49/133 (36%), Gaps = 5/133 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E   I  AH     P+      K          +++  CNG+EI +     +  
Sbjct: 367 LFEEKVEATLIQPAHVI-HFPKDISPFAKEVPGEPRLVERFETYCNGWEIGNAFSELNDP 425

Query: 502 EVMLQAFSNVGISKEVVENR----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                              +          A   GMPP GG+  G+DR++MLL  + ++R
Sbjct: 426 VEQRARMVEQMEQAHARGEKEKTLDEDFLDAMDQGMPPAGGLGIGVDRLIMLLTNSPSIR 485

Query: 558 EVSLFPMSQNFCD 570
           ++ LFP  +   D
Sbjct: 486 DIILFPARRQKAD 498


>gi|295692147|ref|YP_003600757.1| lysyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030253|emb|CBL49732.1| Lysyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 515

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 64/321 (19%), Positives = 121/321 (37%), Gaps = 20/321 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L         +++G +   R  G + F D+ D  G  Q+    D    + 
Sbjct: 44  EKYGNEDKEELNADMP--KTKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDN 101

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  +   +    G+      E       TG++ + A  +  LS A   PLP        
Sbjct: 102 YKIFKKSDIGDFLGI------EGEVMKTDTGELTIRALHVTFLSKALR-PLPDKYHGLKD 154

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
               ++ R+LDL  +         RT+II ++R  +  +NF+E  TP+L        AR 
Sbjct: 155 VEAIYRQRYLDLITNHDSYMRFVHRTQIIQAIRDYLNGQNFLEVETPVLHNIPGGAEARP 214

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+        + Y +  A +   + L+    +R ++I   FR+E   +   P EF +L+ 
Sbjct: 215 FITHHNALDINLY-MRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELES 272

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PD 292
             ++ +  D+++  E ++R   +  S+   ++     I      RR             D
Sbjct: 273 YAAYWDYHDVMDEAEGIIRAAAKVVSDDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVD 332

Query: 293 LRNPIIMHNVTEHFVHSEFRV 313
              P+ +   T+     +  V
Sbjct: 333 FWKPMTLEEATKIAEDHDIHV 353



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 113/348 (32%), Gaps = 26/348 (7%)

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGV-FEEF-----SNGNTVSNNFLRICYDDA 282
           R        D  M FV +  I+  + + L G  F E       N    +     I + +A
Sbjct: 162 RYLDLITNHDSYMRFVHRTQIIQAIRDYLNGQNFLEVETPVLHNIPGGAEARPFITHHNA 221

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +      +  L  P+    V +     E     +   ++  +       +       + D
Sbjct: 222 LDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNPEFTELESYAAYWDYHD 281

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            M+E                + + G +   G             +   +  + G   +  
Sbjct: 282 VMDEAEGIIRAAAKV-----VSDDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVDFW-- 334

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
              P+            IA++  I     ++   I++  F+E   EE  +D         
Sbjct: 335 --KPMTLEEA-----TKIAEDHDIHVEKFWKVGHIINA-FFEKYCEETIVDPTFVYGHPV 386

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           +    + K  D       ++++   G E  +     +  +   + F      +E   +  
Sbjct: 387 EISPLAKKNAD-DPRFTDRFEIYIMGEEYGNAFSELNDPDDQRERFEAQMEEREAGNDEA 445

Query: 523 G----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                   RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 446 DMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 493


>gi|227878375|ref|ZP_03996330.1| lysine--tRNA ligase [Lactobacillus crispatus JV-V01]
 gi|227862054|gb|EEJ69618.1| lysine--tRNA ligase [Lactobacillus crispatus JV-V01]
          Length = 516

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 64/321 (19%), Positives = 121/321 (37%), Gaps = 20/321 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L         +++G +   R  G + F D+ D  G  Q+    D    + 
Sbjct: 44  EKYGNEDKEELNADMP--KTKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDN 101

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  +   +    G+      E       TG++ + A  +  LS A   PLP        
Sbjct: 102 YKIFKKSDIGDFLGI------EGEVMKTDTGELTIRALHVTFLSKALR-PLPDKYHGLKD 154

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
               ++ R+LDL  +         RT+II ++R  +  +NF+E  TP+L        AR 
Sbjct: 155 VEAIYRQRYLDLITNHDSYMRFVHRTQIIQAIRDYLNGQNFLEVETPVLHNIPGGAEARP 214

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+        + Y +  A +   + L+    +R ++I   FR+E   +   P EF +L+ 
Sbjct: 215 FITHHNALDINLY-MRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELES 272

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PD 292
             ++ +  D+++  E ++R   +  S+   ++     I      RR             D
Sbjct: 273 YAAYWDYHDVMDEAEGIIRAAAKVVSDDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVD 332

Query: 293 LRNPIIMHNVTEHFVHSEFRV 313
              P+ +   T+     +  V
Sbjct: 333 FWKPMTLEEATKIAEDHDIHV 353



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 113/348 (32%), Gaps = 26/348 (7%)

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGV-FEEF-----SNGNTVSNNFLRICYDDA 282
           R        D  M FV +  I+  + + L G  F E       N    +     I + +A
Sbjct: 162 RYLDLITNHDSYMRFVHRTQIIQAIRDYLNGQNFLEVETPVLHNIPGGAEARPFITHHNA 221

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +      +  L  P+    V +     E     +   ++  +       +       + D
Sbjct: 222 LDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNPEFTELESYAAYWDYHD 281

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            M+E                + + G +   G             +   +  + G   +  
Sbjct: 282 VMDEAEGIIRAAAKV-----VSDDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVDFW-- 334

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
              P+            IA++  I     ++   I++  F+E   EE  +D         
Sbjct: 335 --KPMTLEEA-----TKIAEDHDIHVEKFWKVGHIINA-FFEKYCEETIVDPTFVYGHPV 386

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           +    + K  D       ++++   G E  +     +  +   + F      +E   +  
Sbjct: 387 EISPLAKKNAD-DPRFTDRFEIYIMGEEYGNAFSELNDPDDQRERFEAQMEEREAGNDEA 445

Query: 523 G----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                   RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 446 DMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 493


>gi|317051523|ref|YP_004112639.1| lysyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946607|gb|ADU66083.1| lysyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 498

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 58/278 (20%), Positives = 107/278 (38%), Gaps = 20/278 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +  +R  G   F+ +RD  G  Q     D    +     +   V  I        
Sbjct: 64  TIAGRIMALRSFGKAAFVKLRDRTGSVQAYVARDDIGSDAFGQFKKIEVGDI------IE 117

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK- 140
                    T ++ L A    +L  A   PLP            ++ R++DL  +   + 
Sbjct: 118 VCGFPFRTKTDELSLHATTCRLLVKAVR-PLPEKWHGLKDRETCYRQRYVDLMVNEESRE 176

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQ 199
             + R RI+  +R    A +++E  TP++        A+ F+          Y L  AP+
Sbjct: 177 RFLMRGRIVKFIRDYFTARDYLEVETPMMHPLLGGAAAKPFVTHHNTLDMDLY-LRIAPE 235

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GFDR F+I   FR+E       P EF  ++   ++    D+++  E++L  
Sbjct: 236 LYLKRLVVGGFDRVFEINRNFRNEGISPKHNP-EFTMIEWYQAYATYHDLMDLTEDMLCT 294

Query: 260 VFEEFSNGNTVSN---------NFLRICYDDAIRRYGT 288
           +  +    +T++           F R+    A+ +Y  
Sbjct: 295 MARQLLGSDTITYGEHQIRLQAPFPRLTIRQALLQYSH 332



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 25/158 (15%)

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
            +  R   A    ++     +  +I+DFP     +E   +  +H                
Sbjct: 358 MSHERILFALFEELVESKLIQPTFIVDFP-----KEISPLAKSHQ------------DNP 400

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRA 528
           D       +++L   G+E+ +G    +      + F     +K+  +           RA
Sbjct: 401 D----ITERFELFVAGWELCNGFTELNDPVDQYERFLKQVEAKQSGDEEATDMDLDYIRA 456

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + G+PP  G   GIDR+VML+  A+ +R+V LFP  +
Sbjct: 457 LEYGLPPTAGEGMGIDRLVMLMTNAQTIRDVILFPHMR 494


>gi|41582294|gb|AAS07908.1| asparaginyl-tRNA synthetase [uncultured marine bacterium 463]
          Length = 465

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 74/401 (18%), Positives = 128/401 (31%), Gaps = 50/401 (12%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           M  + T      G   VGS V + GW+   R    GI FL + D      + A   S   
Sbjct: 1   MSEFTTVVAALKGELAVGSQVMVKGWLRSKRDSKAGISFLAVHDGTAFDAIQAVVPSDLD 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
                V         G  +    E + +      +E+ A ++E++   ++       ++ 
Sbjct: 61  NYESEVLKLS----TGCAVVICGELVESQGKGQSVEIQATEVEVVGWVDDAETYPIAKKR 116

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           +          L  R +T       RT + N++       +F   +TPILT S  EGA +
Sbjct: 117 HTFEYLRTQAHLRPRTNTFGAITRVRTTLANAIHNYFHDNDFNWINTPILTGSDCEGAGE 176

Query: 180 FLVPSRVN--------------QGSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
               S ++              +  F+A         Q +         + +   P FR 
Sbjct: 177 LFRVSTLDFANLPLDGKGGVNFEEDFFAGESFLTVSGQLEVESYCLAMSKVYTFGPTFRA 236

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV------------ 270
           E+  + R   EF+ ++ E++F + +D  +  E++L+ VF                     
Sbjct: 237 ENSNTSRHLAEFWMVEPEIAFADLNDDADLAESLLKHVFTRILEEREDDMAFFQQRIDKT 296

Query: 271 ---------SNNFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILS 319
                     NNF R+ Y +AI            P+       +EH         ++   
Sbjct: 297 VIDRLRAVIDNNFERMDYSEAITILKNSGKKFEYPVEWGVDMASEHER-----FLAEEHV 351

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
             P   +           R   D     A     PG+  I 
Sbjct: 352 GRPVVVMNYPKDIKAFYMRLNDDEKTVAAMDVLAPGIGEII 392



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 46/150 (30%), Gaps = 28/150 (18%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +      +M++P        K I      F M     E              
Sbjct: 342 HERFLAEEHVGRPVVVMNYP--------KDIKA----FYMRLNDDEKTVA---------A 380

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            D++  G  EI  G  R    +V+             +           + G  PH G  
Sbjct: 381 MDVLAPGIGEIIGGSQREERLDVLDARMDEH------LREELWWYRDLRRYGTVPHAGFG 434

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R++  + G +NVR+   FP +    D
Sbjct: 435 LGFERLLNYVTGMENVRDAIPFPRTPGNAD 464


>gi|218903321|ref|YP_002451155.1| aspartyl-tRNA synthetase [Bacillus cereus AH820]
 gi|218538197|gb|ACK90595.1| aspartyl-tRNA synthetase [Bacillus cereus AH820]
          Length = 432

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A F 
Sbjct: 5   MKRSLTKEC----TEKSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGF- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++  
Sbjct: 60  ---KVDVESIVHVIGEIVETSKTEL-------GVEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 28/164 (17%)

Query: 406 PLKFCSFA--ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
             K+C  +   D      + LG      +  EF +I  +P             A   +TM
Sbjct: 287 KSKYCKESPVGDLDTEGEKLLGKYVNETYKSEFVFITHYP-----------KEARPMYTM 335

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P     S+  +         +DL+  G EI SG  R H  E++L +F    +      ++
Sbjct: 336 PNNENSSITDS---------FDLLYKGLEITSGAQRIHNYEMLLDSFKEKRLHP----DK 382

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           F      F+ G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 383 FQSYLNTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|114776308|ref|ZP_01451353.1| Lysyl-tRNA synthetase class II [Mariprofundus ferrooxydans PV-1]
 gi|114553138|gb|EAU55536.1| Lysyl-tRNA synthetase class II [Mariprofundus ferrooxydans PV-1]
          Length = 509

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 11/242 (4%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R++G +   R  G   F+ ++D  G  Q+  N D    ++    R   +  I G      
Sbjct: 74  RVAGRMMAHRVMGKSSFVKLQDGSGQIQLFLNRDVLGADVYNPTRKWDLGDIIG------ 127

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHK 140
           AE        G++ +    IE +S     PLP           R++ R++DL        
Sbjct: 128 AEGTLFRTRAGELSIRVTHIETVSKCLR-PLPEKWHGLSDVETRYRQRYVDLMVTPESRD 186

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
              +R+RI++ +R  +    FIE  TP+L   +    AR F           + L  AP+
Sbjct: 187 TFRQRSRIVSLLRQGLEERGFIEVETPMLQPEAGGAAARPFSTHHNALNMELF-LRIAPE 245

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F++   FR+E   +   P EF  ++   ++ + +D ++T E ++R 
Sbjct: 246 LYLKRLLVGGFERVFEMNRNFRNEGSDATHNP-EFTMVEFYQAYADFNDAMDTTEGLMRS 304

Query: 260 VF 261
           + 
Sbjct: 305 IA 306



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 61/166 (36%), Gaps = 28/166 (16%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
            PL     A      + +EL  +     +  +I  +P               +P      
Sbjct: 365 KPLITWK-AGHYLLALFEEL--VEPELLQPTFITHYP------------VDVSPLARRSN 409

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
              ++           +++L   G E+A+G    +  +           +K   +    G
Sbjct: 410 DDATVTD---------RFELFVAGREMANGFSELNDPDDQRGRLVAQAQAKAAGDAEASG 460

Query: 525 ----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                 RA + GMPP  G+  G+DR+VM+L G  ++R+V LFP  +
Sbjct: 461 VDEDFLRALEFGMPPAAGVGIGVDRLVMMLTGQHSIRDVLLFPHMR 506


>gi|21264011|sp|Q922B2|SYDC_MOUSE RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|14250408|gb|AAH08638.1| Aspartyl-tRNA synthetase [Mus musculus]
          Length = 501

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 91/379 (24%), Positives = 152/379 (40%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL V      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +   PE    
Sbjct: 110 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNFL-----------R 276
           F  LD+EM+F        ++I +T+  + +G+ E F +   TVS  F            R
Sbjct: 286 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    +  + +    ++F V  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF             D  + K +  YD+   G EI SG  R H  +++ +   
Sbjct: 393 KYPLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERAL 443

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           + GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP      
Sbjct: 444 HHGIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRL 499

Query: 570 DL 571
             
Sbjct: 500 TP 501


>gi|255535637|ref|YP_003096008.1| lysyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255341833|gb|ACU07946.1| Lysyl-tRNA synthetase (class II) [Flavobacteriaceae bacterium
           3519-10]
          Length = 565

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 67/353 (18%), Positives = 135/353 (38%), Gaps = 32/353 (9%)

Query: 6   THSCGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           TH+   +  S   G  V+++G +   R  G   F +++D  G  QV  N D  C    K+
Sbjct: 33  THTTKAIKESFAEGEKVQIAGRLMSRRIQGKASFAELQDSDGRIQVYFNRDEICTGDDKT 92

Query: 65  VRS--EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--- 119
           + +     L   G ++    E     +  G++ +  +  +IL+ +         +     
Sbjct: 93  LYNEVYKHLLDIGDIIGIEGELFTTQV--GEMTVKVENFKILTKSLRPLPQPRTDENGVT 150

Query: 120 ----YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R++DL  +   K+  VKRT++ N+MR       + E  TPIL +   
Sbjct: 151 HDAFNDPELRYRQRYVDLIVNPQVKDVFVKRTKLFNAMRTFFNDAGYFEVETPILQSIPG 210

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          Y L  A + Y + L+  GFD  ++ +  FR+E       P E
Sbjct: 211 GAAAKPFITHHNALDIPLY-LRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  L++ +++ + + +++  E +L     + +     +              +G  + D 
Sbjct: 269 FTALEIYVAYKDYNWMMDFTEKLLEYCAVQVNGSTNAT--------------FGEHQIDF 314

Query: 294 RNPIIMHNVTEHFVHSEFRVF--SKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           + P    ++TE  ++             +    +   I      G     D +
Sbjct: 315 KAPYPRISMTEAILNFTGFDITGKSESELFDFAKSIGIDVNETMGKGKLIDEI 367



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 25/143 (17%)

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             N  +  +I D+P               +P T      E L           +++L+  
Sbjct: 373 EGNFIQPTFITDYP------------IEMSPLTKKHRSKEGL---------TERFELMVC 411

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGI 543
           G E+A+     +      + F       E  ++          RA + GMPP  G+  G+
Sbjct: 412 GKEVANAYSELNDPIDQRERFEAQAALSERGDDEAMFIDNDFLRALEYGMPPTSGLGIGM 471

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR++M L    +++E+  FP  +
Sbjct: 472 DRLIMFLTNNPSIQEILFFPQMK 494


>gi|211065507|ref|NP_803228.2| aspartyl-tRNA synthetase, cytoplasmic isoform 1 [Mus musculus]
 gi|74142156|dbj|BAE31847.1| unnamed protein product [Mus musculus]
 gi|74142233|dbj|BAE31881.1| unnamed protein product [Mus musculus]
 gi|74146640|dbj|BAE41327.1| unnamed protein product [Mus musculus]
 gi|74181559|dbj|BAE30045.1| unnamed protein product [Mus musculus]
 gi|74207176|dbj|BAE30780.1| unnamed protein product [Mus musculus]
 gi|74214523|dbj|BAE31110.1| unnamed protein product [Mus musculus]
 gi|74220274|dbj|BAE31315.1| unnamed protein product [Mus musculus]
          Length = 501

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 91/379 (24%), Positives = 152/379 (40%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL V      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +   PE    
Sbjct: 110 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNFL-----------R 276
           F  LD+EM+F        ++I +T+  + +G+ E F +   TVS  F            R
Sbjct: 286 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    +  + +    ++F V  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF             D  + K +  YD+   G EI SG  R H  +++ +   
Sbjct: 393 KYPLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERAL 443

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           + GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP      
Sbjct: 444 HHGIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRL 499

Query: 570 DL 571
             
Sbjct: 500 TP 501


>gi|229169285|ref|ZP_04296996.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614180|gb|EEK71294.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 463

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 132/376 (35%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
                   V++SGW+  +R      F+++ D       Q+V + +   F+    +     
Sbjct: 13  TEKYADQTVQVSGWIRNLRDSKAFGFIELNDGSFFKGVQIVFDTELENFKEIAKLPLSSS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G V++               E+ A+KI+I  +++    P+  +R   E +R     
Sbjct: 73  VKVEGKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++        F+   TPI+T S  EGA +    +  +   
Sbjct: 124 LRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 VPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F E  D+++  E++L+   +          +F                   
Sbjct: 244 FWMVEPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVINS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              RI Y +AI+       + + P+   +   TEH  +    +F + + V    +     
Sbjct: 304 DFGRITYTEAIKVLQESGAEFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  RMNE
Sbjct: 361 -------KAFYMRMNE 369



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGAEFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M           D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMRMNE-------DGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|310642513|ref|YP_003947271.1| asparaginyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309247463|gb|ADO57030.1| Asparaginyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 431

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 74/299 (24%), Positives = 120/299 (40%), Gaps = 31/299 (10%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLC 72
            VG  V +  WV+  R  G I FL +RD  G  Q V        +I   AKS+  E  L 
Sbjct: 13  HVGETVTIGAWVNNKRSSGKIQFLQLRDGSGYIQGVIVKSEVSEDIWNDAKSLTQESSLY 72

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G+V                 EL+   IEI+ + E  P+     +E+       +R L 
Sbjct: 73  VTGIVREEPRSQS-------GYELTVTGIEIIHLTENYPITP---KEHGVDFLMDHRHLW 122

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       ++ R  II +++       F +   PILT SS EG  +       ++ ++ 
Sbjct: 123 LRSAKQRAVLIIRAEIIRAIQEFFNGNGFTKVDPPILTPSSAEGTTELFHIKYFDEDAY- 181

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ EM+FV+ ++ L  
Sbjct: 182 -LTQSGQLYMEAA-AMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFVDHEESLRV 239

Query: 253 MENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
            E  +  + +               + S    +   F RI YD+AI     +  D+   
Sbjct: 240 QEQFVSHIVQSVLKNCAKELEAIGRDVSKLEQIQGEFPRITYDEAIAFLQGEGFDIPWG 298



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 4/76 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R     +M + F+   +        +         G  PH G   G++R V  
Sbjct: 354 EIIGGSQRIDDPALMEERFNEHNL----AREAYQWYMDLRTYGSVPHSGFGLGLERTVAW 409

Query: 550 LLGAKNVREVSLFPMS 565
           + G  +VRE   FP  
Sbjct: 410 ICGLDHVRETIPFPRM 425


>gi|299135981|ref|ZP_07029165.1| asparaginyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298602105|gb|EFI58259.1| asparaginyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 449

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 55/291 (18%), Positives = 108/291 (37%), Gaps = 29/291 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVL 71
              G  + L GW++ +R  G ++F   RD  G  Q +    +   E+ +++++   E  +
Sbjct: 18  QHEGQTITLRGWLYNLRSSGKLLFPTFRDGSGTIQGIVPKAAVAEEVFETLKNLTLESSV 77

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G V + S             EL  + + +     +        +E+      ++R L
Sbjct: 78  VVTGKVRADSR-------APSGFELDVENVTVTQRIADETPYPISLKEHGVDFLMEHRHL 130

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR       +  R  I+ +         FI    PILT ++ EG  +       +    
Sbjct: 131 WLRTPRQSAILRVRATIMRAAAEYFDTNGFIRTDPPILTPNACEGTSELFEMDYFDDDKA 190

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E+++++ D ++ 
Sbjct: 191 Y-LTQSGQLYIE-ATALALGKVYSFGPTFRAEKSKTRRHLTEFWMIEPEVTYLDLDGLMG 248

Query: 252 TMENVLRGVFEEFSNGNT-----------------VSNNFLRICYDDAIRR 285
             E  L  +       +                      F R+ YD+A + 
Sbjct: 249 LAEGFLTHIVTRVLETHRADLKVIGKEVSKLEAVAAPGEFPRLSYDEAHQM 299



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 36/115 (31%), Gaps = 10/115 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M     +  K   +  +    Y       EI  G  R    +++      
Sbjct: 339 RYPAEVKAFYMQPDPNDPTKALCVDVLAPEGY------GEIIGGSQRVDSYDLLKSRIEQ 392

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             +        F       + G  PH G   GI+R V  + G ++VRE   F  +
Sbjct: 393 HNLPLAA----FQWYLDLRKYGSVPHSGFGMGIERAVAWICGLEHVRETIPFART 443


>gi|30262201|ref|NP_844578.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47527478|ref|YP_018827.1| aspartyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185042|ref|YP_028294.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|165872218|ref|ZP_02216856.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167641071|ref|ZP_02399327.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170686496|ref|ZP_02877717.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170708425|ref|ZP_02898868.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177650759|ref|ZP_02933656.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190567860|ref|ZP_03020771.1| aspartyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227814999|ref|YP_002815008.1| aspartyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229601858|ref|YP_002866551.1| aspartate--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254684769|ref|ZP_05148629.1| aspartyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254721062|ref|ZP_05182853.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254737216|ref|ZP_05194920.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254751531|ref|ZP_05203568.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254759046|ref|ZP_05211073.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|30256832|gb|AAP26064.1| aspartate--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47502626|gb|AAT31302.1| aspartyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49178969|gb|AAT54345.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164712011|gb|EDR17550.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510969|gb|EDR86359.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170126664|gb|EDS95548.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170669572|gb|EDT20314.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172083220|gb|EDT68281.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190560915|gb|EDV14889.1| aspartyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227004153|gb|ACP13896.1| aspartate--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229266266|gb|ACQ47903.1| aspartate--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 432

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A F 
Sbjct: 5   MKRSLTKEC----TEKSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGF- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++  
Sbjct: 60  ---KVDVESIVHVIGEIVETSKTEL-------GVEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 68/164 (41%), Gaps = 28/164 (17%)

Query: 406 PLKFCSFA--ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
             K+C  +   D      + LG      +  EF +I  +P             A   +TM
Sbjct: 287 KSKYCKESPVGDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTM 335

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P     ++  +         +DL+  G EI SG  R H  E++L +F   G+      ++
Sbjct: 336 PNNENSAITDS---------FDLLYKGLEITSGAQRIHNYEMLLDSFKEKGLHP----DK 382

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           F      F+ G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 383 FQSYLNTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|171914137|ref|ZP_02929607.1| lysyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 487

 Score =  189 bits (481), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 11/264 (4%)

Query: 6   THSCGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           TH  G L         V+++G V   R  G  +F D+ D  G  Q   N      E  + 
Sbjct: 37  THQPGALRRDFQPDLEVKVAGRVTARRTMGKAVFFDLSDITGRIQCYVNKKEIGDEAFEL 96

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +     L   G  +  S +T      TG+  +  + ++++S A   PLP          I
Sbjct: 97  LTE---LVDIGDWLGVSGKTFVTK--TGEPSVHTETLQVMSKALR-PLPDKWHGVTDREI 150

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLV 182
           +++ R+LDL  +   ++    R+ ++  +R  +    F+E  TP++        A  F  
Sbjct: 151 KYRQRYLDLISNERSRDTFVQRSLMVAEIRRFLQDRGFLEVETPMMQDVPGGAAATPFET 210

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +    + Y L  AP+ + + L+  GF + F++   FR+E   S R   EF  L+   +
Sbjct: 211 FFKALNMAMY-LRIAPELFLKRLLVGGFTKIFELNRNFRNEGL-SRRHNPEFTMLEAYWA 268

Query: 243 FVEQDDILNTMENVLRGVFEEFSN 266
           F + + + + +E+++  + E+F  
Sbjct: 269 FSDFEQMADLVESMVCHLAEKFCG 292



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 7/128 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           +E   EEK  D      T     +  L K N         Y+LV NG EI+ G    +  
Sbjct: 365 FEKLIEEKSFDPLF--VTHVPAELVPLAKQNKADGSVVDVYELVINGQEISPGYSELNDP 422

Query: 502 EVMLQAFSNVGISKEV-VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            V  +   +    +   V+  F     A + GMP  GGI  GIDR+VM+L GA+++R+V 
Sbjct: 423 IVQRERLEHQAGEETQKVDEEF---LLALEYGMPSAGGIGIGIDRLVMMLTGAESIRDVV 479

Query: 561 LFPMSQNF 568
           LFP  +  
Sbjct: 480 LFPQLKKR 487


>gi|255743876|ref|ZP_05417832.1| lysyl-tRNA synthetase (class II) [Vibrio cholera CIRS 101]
 gi|262156095|ref|ZP_06029214.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae INDRE 91/1]
 gi|262169963|ref|ZP_06037653.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae RC27]
 gi|31340515|sp|Q9KU60|SYK_VIBCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|255738507|gb|EET93896.1| lysyl-tRNA synthetase (class II) [Vibrio cholera CIRS 101]
 gi|262021697|gb|EEY40408.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae RC27]
 gi|262030131|gb|EEY48776.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae INDRE 91/1]
 gi|327483463|gb|AEA77870.1| Lysyl-tRNA synthetase (class II) [Vibrio cholerae LMA3894-4]
          Length = 510

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 64/292 (21%), Positives = 132/292 (45%), Gaps = 25/292 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G V   R      FL I++  G  Q  A+      E+ + ++ ++    
Sbjct: 66  LEALNHVVSIAGRVMAKRGP----FLVIQETSGRIQAYASK-----EVQQELKDKYQGLD 116

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++        +    G + ++ ++ ++L+ A   PLP        + +R++ R++DL
Sbjct: 117 IGDIIGVQGALHKSG--KGDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 173

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  + R+++++++R  MI++ F+E  TP++        AR F+          
Sbjct: 174 IVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPM 233

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++
Sbjct: 234 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMD 291

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
             E +L  V  E     ++            + R+   DAI+ Y  +   ++
Sbjct: 292 LTEELLSSVALEVLGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQ 343



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 386 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 445

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP 
Sbjct: 446 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFPA 505

Query: 565 SQ 566
            +
Sbjct: 506 MR 507


>gi|258624705|ref|ZP_05719639.1| lysyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258582992|gb|EEW07807.1| lysyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 512

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 64/292 (21%), Positives = 133/292 (45%), Gaps = 25/292 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G V   R      FL I++  G  Q  A+      E+ + ++ ++    
Sbjct: 68  LEALNHVVSIAGRVMAKRGP----FLVIQETSGRIQAYASK-----EVQQELKDKYQGLD 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++        +    G + ++ ++ ++L+ A   PLP        + +R++ R++DL
Sbjct: 119 IGDIIGVQGALHKSG--KGDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 175

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  + R+++++++R  MI++ F+E  TP++        AR F+          
Sbjct: 176 IVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPM 235

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++
Sbjct: 236 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMD 293

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
             E +L  V  E     ++            ++R+   DAI+ Y  +   ++
Sbjct: 294 LTEELLSSVALEVLGSTSMPYGEHTVEFGGKYVRMSMFDAIKHYNPNHAQIQ 345



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 388 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 447

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 448 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 506


>gi|145352203|ref|XP_001420444.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580678|gb|ABO98737.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 607

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 71/346 (20%), Positives = 133/346 (38%), Gaps = 29/346 (8%)

Query: 5   RTHSCGDLGVSDVG---------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           RT  C  L     G         S   + G V   R  G + FL + D  G  Q+  +  
Sbjct: 118 RTKYCDALQREHEGLENGVEIEGSSEAVCGRVMAKRSFGKLAFLSLVDERGSVQLFCDKK 177

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                   +      L   G ++        ++   G++ +   K+++L+ A  LPLP  
Sbjct: 178 RLDETSPGAFEMITELVDVGDIIGVHGSVKRSD--KGELSIVPAKVQMLTKAL-LPLPDK 234

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASS 173
                    R++ R++DL     +      R+ II+++R  +  + F+E  TP+L T + 
Sbjct: 235 WHGLQDVEKRYRQRYVDLIVSPEVRNTFKARSNIISTIRRMLDDDGFLEMETPVLHTQAG 294

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F        G    L  A + + + L+  GF+R +++   FR+E   +   P E
Sbjct: 295 GADAKPFNTFHNAL-GMQLTLRIATELHLKRLVVGGFERVYELGRVFRNEGLSTRHNP-E 352

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  D+L   E ++     +     T+    + I            +P  
Sbjct: 353 FTSIEVYQAYADVTDMLELTEEMICRCAMKACGTLTIPYGDVTIDLSQ--------RPWR 404

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
           R P  M+++ +     +   F   L    G +  AIPA      +A
Sbjct: 405 RAP--MNDLVKEATGVDVMAFGDDLE---GAKAAAIPALKAHSKKA 445



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS--IKAFQYDLVCNGFEIASGGIRNH 499
            +E   E   I      F +      S       S      +++L   G E+A+      
Sbjct: 465 MFEAACESDLIQPT---FVLDHPLEISPLAKPHRSKPGVTERFELFVVGRELANSFSELT 521

Query: 500 MSEVMLQAFSNVGIS------------------KEVVENRFGGLYRAFQCGMPPHGGIAA 541
                 +      ++                     ++  F     A + GMPP  G+  
Sbjct: 522 DPIDQRKRLEAQMVTHAKTSAAQREAAAANEAYDVEMDEDF---VAALEYGMPPTAGMGL 578

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+DR+VMLL  + ++R+V  FP+ + 
Sbjct: 579 GVDRLVMLLTNSPSIRDVIAFPLLKK 604


>gi|255690547|ref|ZP_05414222.1| asparagine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260624004|gb|EEX46875.1| asparagine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 467

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 57/293 (19%), Positives = 108/293 (36%), Gaps = 25/293 (8%)

Query: 1   MHRY-RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L  +D+G+ V + GWV   R    + F+ + D   I  +    D A F
Sbjct: 1   MEKIGRTKIVDLLKRTDIGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNLQVVVDLANF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +              G  +S + E + +     ++E+ A++IE+L   +        ++ 
Sbjct: 61  DE-----EMLKQITTGACISVNGEMVESVGSGQKVEVQAREIEVLGTCDNTYPLQ--KKG 113

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           +      +   L  R +T       R  +  ++      + F    TPI+TAS  EGA  
Sbjct: 114 HSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQ 173

Query: 180 FLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRD 222
               + +N                 F+    +     Q +  L A+     +   P FR 
Sbjct: 174 MFQVTTMNLYDLKKNEEGSIIYDDDFFGKQASLTVSGQLEGELAATALGSIYTFGPTFRA 233

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           E+  + R   EF+ ++ E++F +  D ++  E  ++       +       FL
Sbjct: 234 ENSNTPRHLAEFWMIEPEVAFNDITDNMDLAEEFIKYCVRWALDNCADDVKFL 286



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 74/222 (33%), Gaps = 31/222 (13%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL-DMQDGDSCFFIAGDPLKFCSFAA 414
           LA  F +      +       K LN +  + +  RL  +   D       D +K    A 
Sbjct: 263 LAEEFIKYCVRWALDNCADDVKFLNDMFDKGLIERLQGVLKDDFVRLPYTDGIKILEDAV 322

Query: 415 DARNHIAQELGIINCNCFEF--CWIMDFPFYEWNEEEKKIDFAHN----PFTMPQGGMES 468
                          + FEF   W +D      +E E+ +   H       T     +++
Sbjct: 323 A------------KGHKFEFPVYWGVDL----ASEHERYLVEEHFKRPVILTDYPKEIKA 366

Query: 469 L---KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
               +  D  +++A    L     EI  G  R      ++     + I  + +       
Sbjct: 367 FYMKQNEDGKTVRAMDV-LFPKIGEIIGGSERESDYNKLMTRIEELHIPMKDMW----WY 421

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
               + G  PH G   G +R+++ + G  N+R+V  FP +  
Sbjct: 422 LDTRKFGTCPHSGFGLGFERLLLFVTGMSNIRDVIPFPRTPR 463


>gi|119502780|ref|ZP_01624865.1| asparaginyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119461126|gb|EAW42216.1| asparaginyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 465

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 69/389 (17%), Positives = 126/389 (32%), Gaps = 50/389 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
             S VG  + + GW+   R    GI FL + D      + A   +      + V    + 
Sbjct: 13  DPSQVGQSITVKGWLRSKRDSKAGISFLAVHDGTCFDAIQAVVPNTLSNYDEEV----LQ 68

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  + + + +      +E+ A  + ++   ++       ++ +          L
Sbjct: 69  LATGCAVEVAGQLVVSEGKGQSVEIQATAVTVIGWVDDPESYPIAKKRHTFEYLRTQAHL 128

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
             R +T       R  +  ++      ++F   +TPI+TAS  EGA +    S ++  + 
Sbjct: 129 RTRTNTFGAITRVRHVLARAIHEYFHRQDFYWVNTPIITASDCEGAGELFRVSTLDYANL 188

Query: 192 YALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEF 234
              P     + Q        L  SG            R +   P FR E+  + R   EF
Sbjct: 189 PRNPDGSVDHSQDFFGSEAFLTVSGQLAVESHCLSMSRVYTFGPTFRAENSNTTRHLAEF 248

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNN 273
           + ++ E++F + +D     E +LR V  E                           V +N
Sbjct: 249 WMVEPEIAFADLNDNAALAEGLLRHVIAEVLEHCADDMAFFQQRIDKSVLQRLQGIVDSN 308

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           F R+ Y +AI            P+   +   +EH  +      ++     P         
Sbjct: 309 FERMTYSEAIAILENCGQSFEFPVHWGIDMASEHERY-----LAEEHVGRPIVVTDYPSD 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 364 IKAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 50/150 (33%), Gaps = 28/150 (18%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +      + D+P                 F M          +D  ++ A  
Sbjct: 342 HERYLAEEHVGRPIVVTDYP------------SDIKAFYMR-------LNDDGKTVAAM- 381

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            D++  G  EI  G  R    +V+       G   + V           + G  PH G  
Sbjct: 382 -DVLAPGIGEIIGGSQREERLDVLE------GRMDQAVLEDLWWYRDLRRYGTVPHAGFG 434

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R++  + G +NVR+V  FP +    D
Sbjct: 435 LGFERLLAYITGMENVRDVIPFPRTPGRAD 464


>gi|161528379|ref|YP_001582205.1| aspartyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339680|gb|ABX12767.1| aspartyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 436

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 72/250 (28%), Positives = 120/250 (48%), Gaps = 14/250 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H   ++  S  G+ V + GWV  VR HG I F  IRD  G   VVA       +I + 
Sbjct: 11  RSHYSDEINSSMDGTQVTVMGWVLTVRGHGNISFATIRDKNGDVSVVAKKGDCPDDIREK 70

Query: 65  ---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREY 120
              +++   + I G V        ++       E+   ++ + S  E+  P     +   
Sbjct: 71  ISYLKAHSSIAITGNV-------KSSEKAPSGYEIVPTELRVFSEVEKIPPFEPIAKTVK 123

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R + R +DLRR  L      R+ ++ S+R     +NF+E +TP + A++ EG    
Sbjct: 124 NIDTRLEVRPIDLRRKVLQHIFNTRSLVLKSIRSYFNDQNFVEINTPKMIATATEGGAAL 183

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 N+ +F A  Q+PQ YK+ L  S F++ F+IAP FR E  R++R   E   +D+E
Sbjct: 184 FPIFYYNKEAFLA--QSPQLYKEQLTMS-FEKVFEIAPIFRAEPSRTNRHLAEAISIDLE 240

Query: 241 MSFVEQDDIL 250
            +F++ +D++
Sbjct: 241 EAFIDYNDVM 250



 Score = 97.4 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 27/155 (17%)

Query: 414 ADARNHIAQEL---GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           A A+     +L    +       F +I D+P             A  PF         +K
Sbjct: 300 AGAKTEWGDDLYPSNLKKIGLEGFYFIKDWPL------------APKPFY--------VK 339

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            +      +  +DL+    E++SG  R      + +   N G++     + F     AF 
Sbjct: 340 DSKANPKISESFDLMFGDLELSSGSTRIEKRNELAERMKNKGMNT----DAFEYHLGAFD 395

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G+PPH G   G++R++M L G +N+R+V+ +P  
Sbjct: 396 YGVPPHAGCGIGLERLIMALTGTENIRDVTFYPRD 430


>gi|59803475|gb|AAX07827.1| cell proliferation-inducing protein 40 [Homo sapiens]
          Length = 501

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 87/379 (22%), Positives = 151/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL +      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--------- 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +         
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 118 ----REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                   +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------LR 276
           F  LD+EM+F        ++I +TM ++ +G+ E F       N       F      LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVHIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    + ++ +    ++F +  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 345 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 394

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 395 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 445

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 446 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501


>gi|152976944|ref|YP_001376461.1| asparaginyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189083268|sp|A7GTK8|SYN_BACCN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|152025696|gb|ABS23466.1| asparaginyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 463

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 64/357 (17%), Positives = 124/357 (34%), Gaps = 51/357 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWV 70
               V   V++SGW+  +R      F+++ D      V    + +   F+    +     
Sbjct: 13  TDKYVDQKVQVSGWIRNLRDSKVFGFIELNDGSFFKSVQIVFDTELDNFKEITKLPLSSS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G  ++               E+ A+KIEI  +++    P+  +R   E +R     
Sbjct: 73  IRVEGKFIATP-------TAKQPFEIKAEKIEIEGLSDSDY-PLQKKRHTFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++        F+   TPI+T S  EGA +    +  +   
Sbjct: 124 LRPRTNAFSATFRVRSIAAYAIHKFFQERGFVHVHTPIITGSDTEGAGEMFRVTTHDMNN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 LPKGEDGQVDDSKDFFGRETNLTVSGQLPAEAYALAFRDVYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F E +D+++  E++L+   +           F                   
Sbjct: 244 FWMVEPEIAFAELEDVMDLTEDMLKYAMKYVLEHAPEEMEFFNKFVDKTVLERMNNVINS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
              RI Y +AI+       D + P+   +   TEH  +   +VF + + V    +  
Sbjct: 304 DFGRITYTEAIKVLQESGADFKYPVEWGIDLQTEHERYLSEQVFKRPVFVTDYPKDI 360



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 24/138 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P        K I      F M          ND     A    LV    E+ 
Sbjct: 349 RPVFVTDYP--------KDIKA----FYMRM--------NDDGKTVAATDLLVPGIGELI 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V++     +G+     E  +       + G   H G   G +R +M + G
Sbjct: 389 GGSQREERMDVLVDRIKELGMK----EEDYWWYLELRKYGGTKHAGFGLGFERFLMYITG 444

Query: 553 AKNVREVSLFPMSQNFCD 570
             N+R+V  FP +    +
Sbjct: 445 MGNIRDVIPFPRTPGSAE 462


>gi|15640683|ref|NP_230313.1| lysyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587863|ref|ZP_01677620.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 2740-80]
 gi|121728407|ref|ZP_01681435.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae V52]
 gi|147674731|ref|YP_001216158.1| lysyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153216961|ref|ZP_01950725.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 1587]
 gi|153801992|ref|ZP_01956578.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae MZO-3]
 gi|153818684|ref|ZP_01971351.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae NCTC 8457]
 gi|153826526|ref|ZP_01979193.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae MZO-2]
 gi|153829165|ref|ZP_01981832.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 623-39]
 gi|227080845|ref|YP_002809396.1| heat inducible lysyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229505714|ref|ZP_04395224.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae BX 330286]
 gi|229508712|ref|ZP_04398205.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae B33]
 gi|229512925|ref|ZP_04402392.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae TMA 21]
 gi|229519539|ref|ZP_04408982.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae RC9]
 gi|229520955|ref|ZP_04410377.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae TM 11079-80]
 gi|229530471|ref|ZP_04419859.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae 12129(1)]
 gi|229608733|ref|YP_002879381.1| lysyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254226528|ref|ZP_04920111.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae V51]
 gi|254291903|ref|ZP_04962685.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae AM-19226]
 gi|254850995|ref|ZP_05240345.1| lysyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|9655101|gb|AAF93829.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121547899|gb|EAX57983.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 2740-80]
 gi|121629341|gb|EAX61773.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae V52]
 gi|124114026|gb|EAY32846.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 1587]
 gi|124122451|gb|EAY41194.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae MZO-3]
 gi|125620932|gb|EAZ49283.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae V51]
 gi|126510764|gb|EAZ73358.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae NCTC 8457]
 gi|146316614|gb|ABQ21153.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae O395]
 gi|148875354|gb|EDL73489.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 623-39]
 gi|149739706|gb|EDM53913.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae MZO-2]
 gi|150422189|gb|EDN14154.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae AM-19226]
 gi|227008733|gb|ACP04945.1| heat inducible lysyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227012489|gb|ACP08699.1| heat inducible lysyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229332244|gb|EEN97732.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae 12129(1)]
 gi|229342188|gb|EEO07184.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae TM 11079-80]
 gi|229344228|gb|EEO09203.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae RC9]
 gi|229350174|gb|EEO15127.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae TMA 21]
 gi|229354236|gb|EEO19166.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae B33]
 gi|229357937|gb|EEO22854.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae BX 330286]
 gi|229371388|gb|ACQ61811.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae MJ-1236]
 gi|254846700|gb|EET25114.1| lysyl-tRNA synthetase [Vibrio cholerae MO10]
          Length = 512

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 64/292 (21%), Positives = 132/292 (45%), Gaps = 25/292 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G V   R      FL I++  G  Q  A+      E+ + ++ ++    
Sbjct: 68  LEALNHVVSIAGRVMAKRGP----FLVIQETSGRIQAYASK-----EVQQELKDKYQGLD 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++        +    G + ++ ++ ++L+ A   PLP        + +R++ R++DL
Sbjct: 119 IGDIIGVQGALHKSG--KGDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 175

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  + R+++++++R  MI++ F+E  TP++        AR F+          
Sbjct: 176 IVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPM 235

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++
Sbjct: 236 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMD 293

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
             E +L  V  E     ++            + R+   DAI+ Y  +   ++
Sbjct: 294 LTEELLSSVALEVLGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQ 345



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 388 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 447

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 448 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 506


>gi|260902719|ref|ZP_05911114.1| lysine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308107650|gb|EFO45190.1| lysine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 505

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 66/285 (23%), Positives = 130/285 (45%), Gaps = 25/285 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R      FL I++  G  Q  A+      E+ K ++ ++     G ++  
Sbjct: 68  VAIAGRIMAKRGP----FLVIQETSGRIQAYADK-----EVQKELKEKYQGLDIGDIIGV 118

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                 +    G + ++ ++ E+L+ A   PLP        + +R++ R++DL  +   +
Sbjct: 119 KGALHKSG--KGDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSR 175

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  V R+++++++R  MI++ F+E  TP++        AR F+          Y L  AP
Sbjct: 176 NAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMY-LRIAP 234

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L 
Sbjct: 235 ELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMDFTEELLS 293

Query: 259 GVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
            V  E     ++            + R+   +AI+ Y  D   ++
Sbjct: 294 SVALEVLGSTSMPYGEDTVEFGGKYARMSMFEAIKHYNPDHAKIQ 338



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 381 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 440

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP 
Sbjct: 441 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFPA 500

Query: 565 SQ 566
            +
Sbjct: 501 MR 502


>gi|291238448|ref|XP_002739141.1| PREDICTED: lysyl-tRNA synthetase-like [Saccoglossus kowalevskii]
          Length = 614

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 21/284 (7%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DSACFE 60
           H   +  + D    V ++G VH  R  G  +IF D+R      Q++AN      +   FE
Sbjct: 133 HLKAEEKLQD---EVTVAGRVHAKRLSGAKLIFYDLRAEGVKLQIMANARFFASEDEFFE 189

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I + +R   ++ + G                G++ +    ++ILS      LP       
Sbjct: 190 INERIRRGDIIGVKG---------NPGKTKKGELSIMPTHMQILSPCL-HMLPHLHFGLK 239

Query: 121 PESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            +  RF+ R+LDL   DT+ +  V R RI+N +R  +    F+E  TP++   +      
Sbjct: 240 DKETRFRQRYLDLIINDTVRQKFVTRARIVNYVRKYLDELGFLEVETPMMNMIAGGATAK 299

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
             V    +      +  AP+ Y ++L+  G DR ++I   FR+E       P EF   + 
Sbjct: 300 PFVTHHNDLDMDLFMRVAPELYHKMLVVGGIDRVYEIGRQFRNESIDLTHNP-EFTTCEF 358

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
            M++ + +D++   E+++ G+ +       +  +      ++A 
Sbjct: 359 YMAYADYNDLMEMTESLIAGMVKSVHGSYKIVYHPEGQDGEEAW 402



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 4/110 (3%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++L     E+ +     +   V  + F     +K   ++       G   A + 
Sbjct: 496 KGLTERFELFVCKKEVVNAYTELNDPAVQRKMFELQADAKAAGDDEAQGVDDGFCTALEY 555

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
           G+PP GG   GIDR+ M L  + N++EV  FP  +        + +  + 
Sbjct: 556 GLPPTGGWGMGIDRLTMFLTDSNNIKEVLFFPAMRPEQPETTQTETDANN 605


>gi|255994853|ref|ZP_05427988.1| asparagine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993566|gb|EEU03655.1| asparagine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 462

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 132/364 (36%), Gaps = 46/364 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVLCIDG 75
           G  + + GWV  VR    + F++I D      V A    D   F+ AK +     + + G
Sbjct: 25  GEKIVMQGWVRSVRDSSKLAFMEISDGSHFKPVQAVLEADMKGFDEAKKLPIATAVEVTG 84

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++                EL A ++++L+ A+ +      ++ +         +L  R 
Sbjct: 85  SLVLTPDSKQP-------FELKADQVKVLAGADLMYPLQ--KKRHSMEFLRDIAYLRPRA 135

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           +T       R+ I +++ C     NF+   TPI+TA+  EGA +    + +         
Sbjct: 136 NTFQAVFRLRSVIAHALHCFFQDRNFVYSHTPIITANDCEGAGELFRVTTLESNEEDFSK 195

Query: 190 SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+A         Q +   MA  F   +   P FR E+  + R   EF+ ++ E++F + 
Sbjct: 196 DFFAEKTGLTVSGQLEAEAMALAFRNVYTFGPTFRAENSNTPRHASEFWMIEPEIAFADL 255

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSN---------------------NFLRICYDDAIRR 285
            D ++  E++++ +                                 +F R+ Y +AI  
Sbjct: 256 SDDMDLAEDMIKHIINAAFEKAPFEMKFFDSFIEKGIIKRLEAVMNADFKRMTYTEAIDV 315

Query: 286 YGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG---YEVWAIPAKGGGGNRAF 340
               K     P+   +   TEH  +    V    + V       + + +     G   A 
Sbjct: 316 LKKAKKPFEYPVEWGLDLQTEHERYLSEEVIRGPVFVTDYPSQIKAFYMRENDDGKTVAA 375

Query: 341 CDRM 344
           CD +
Sbjct: 376 CDLL 379



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 74/267 (27%), Gaps = 36/267 (13%)

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMG 373
           F  + +  P +                 +    +A       LA    +   +       
Sbjct: 219 FRNVYTFGPTFRAENSNTPRHASEFWMIEPEIAFADLSDDMDLAEDMIKHIINAAFEKAP 278

Query: 374 PVAKHLNIVNTEAIRVRLDM-QDGDSCFFIAGDPLKFCSFAA---------DARNHIAQE 423
              K  +    + I  RL+   + D       + +     A                  E
Sbjct: 279 FEMKFFDSFIEKGIIKRLEAVMNADFKRMTYTEAIDVLKKAKKPFEYPVEWGLDLQTEHE 338

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             +         ++ D+P                 F M +        ND     A   D
Sbjct: 339 RYLSEEVIRGPVFVTDYP------------SQIKAFYMRE--------NDDGKTVA-ACD 377

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L+  G  EI  G  R    +++ +   + GI+               + G   H G   G
Sbjct: 378 LLVPGVGEIIGGSQREERLDILDRRMQDAGINP----EELSWYRELRKYGGVKHAGFGLG 433

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFC 569
            DRI+M L G KN+R+V  FP +    
Sbjct: 434 FDRIIMYLTGMKNIRDVIPFPRTPRSA 460


>gi|26346400|dbj|BAC36851.1| unnamed protein product [Mus musculus]
          Length = 501

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 91/379 (24%), Positives = 152/379 (40%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL V      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +   PE    
Sbjct: 110 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNFL-----------R 276
           F  LD+EM+F        ++I +T+  + +G+ E F +   TVS  F            R
Sbjct: 286 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFKTEIQTVSKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    +  + +    ++F V  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF             D  + K +  YD+   G EI SG  R H  +++ +   
Sbjct: 393 KYPLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERAL 443

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           + GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP      
Sbjct: 444 HHGIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRL 499

Query: 570 DL 571
             
Sbjct: 500 TP 501


>gi|74226918|dbj|BAE27102.1| unnamed protein product [Mus musculus]
          Length = 501

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 91/379 (24%), Positives = 152/379 (40%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH----YGITQVVANPDSACFEIAKSVR 66
           DL V      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQRFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +   PE    
Sbjct: 110 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNFL-----------R 276
           F  LD+EM+F        ++I +T+  + +G+ E F +   TVS  F            R
Sbjct: 286 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    +  + +    ++F V  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF             D  + K +  YD+   G EI SG  R H  +++ +   
Sbjct: 393 KYPLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERAL 443

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           + GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP      
Sbjct: 444 HHGIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRL 499

Query: 570 DL 571
             
Sbjct: 500 TP 501


>gi|328463468|gb|EGF35119.1| lysyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 516

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/301 (20%), Positives = 116/301 (38%), Gaps = 18/301 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +++G +   R  G + F D+ D  G  Q+    D    +     +   +    G  +   
Sbjct: 62  KIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYNIFKKSDI----GDFLGID 117

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E +     TG++ + A  +  LS A   PLP            ++ R+LDL  +     
Sbjct: 118 GEVM--KTDTGELTVRATHVTFLSKALR-PLPDKYHGLKDVEAIYRQRYLDLITNCDSYM 174

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
               RT+II ++R  +  +NF+E  TP+L        AR F+          Y +  A +
Sbjct: 175 RFVHRTQIIQAIRDYLNKQNFLEVETPVLHNIPGGAEARPFITHHNALDIDLY-MRIALE 233

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  E ++R 
Sbjct: 234 LPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDFHDVMDEAEGIIRA 292

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPIIMHNVTEHFVHSEFR 312
             +  S+   ++     I      RR             D   P+ +   T+     +  
Sbjct: 293 AAKVVSDDGKITYQGQDIDLGKPFRRIHMVDLIKEKTGVDFWKPMTLEEATKIAEDHDIH 352

Query: 313 V 313
           V
Sbjct: 353 V 353



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 112/348 (32%), Gaps = 26/348 (7%)

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVL-RGVFEEF-----SNGNTVSNNFLRICYDDA 282
           R        D  M FV +  I+  + + L +  F E       N    +     I + +A
Sbjct: 162 RYLDLITNCDSYMRFVHRTQIIQAIRDYLNKQNFLEVETPVLHNIPGGAEARPFITHHNA 221

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +      +  L  P+    V +     E     +   ++  +       +       F D
Sbjct: 222 LDIDLYMRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNPEFTELESYAAYWDFHD 281

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            M+E                + + G +   G             +   +  + G   +  
Sbjct: 282 VMDEAEGIIRAAAKV-----VSDDGKITYQGQDIDLGKPFRRIHMVDLIKEKTGVDFW-- 334

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
              P+            IA++  I     ++   I++  F+E   EE  +D         
Sbjct: 335 --KPMTLEEA-----TKIAEDHDIHVEKFWKVGHIINA-FFEKYCEETIVDPTFVYGHPV 386

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           +    + K  D       ++++   G E  +     +  +     F      +E   +  
Sbjct: 387 EISPLAKKNAD-DPRFTDRFEIYIMGEEYGNAFSELNDPDDQRARFEAQMEEREAGNDEA 445

Query: 523 G----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                   RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 446 DMVDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 493


>gi|154274514|ref|XP_001538108.1| lysyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150414548|gb|EDN09910.1| lysyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 609

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 63/353 (17%), Positives = 135/353 (38%), Gaps = 20/353 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV-----VANP 54
           + +Y +   GD         +R++G ++  R  G  +IF DIR      QV         
Sbjct: 111 IKQYESLQKGD---QVKDKELRIAGRIYTKRSAGAKLIFYDIRAEGVKIQVACQAQNVKG 167

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    +  + +R   ++ I G        T   N   G++ + A ++ +L+      +P 
Sbjct: 168 DIPFEDQHEHLRRGDIVGIVGF----PGRTAPKNRADGELSIFATEVVLLAPCL-HQIPS 222

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                  +  R++ R+LDL  +   +N  V R+++I+ +R      +F+E  TP++   +
Sbjct: 223 EHYGLRDQEQRYRQRYLDLIMNDRSRNVFVTRSKMISYIRRFFDERDFVEVETPMMNTIA 282

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                   +    +      L  AP+ Y ++L+  G +R +++   FR+E       P E
Sbjct: 283 GGATAKPFITHHNDLNMDMFLRVAPELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-E 341

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F   +   ++ +  DI+N  E ++ G+ +  + G      F     ++    +      +
Sbjct: 342 FTTCEFYWAYADVYDIMNVTEELVSGLVKHITGG--YETTFHTQTGEEFKVNWKAPWKRI 399

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILS--VNPGYEVWAIPAKGGGGNRAFCDRM 344
                +   T     S  ++ +   +  +    +   I       N    D++
Sbjct: 400 EMIPALEEATGEKFPSGDQLHTMETNEFLKKLLKKVNIECTPPETNARMLDKL 452



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 4/95 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++      EI +     +        F      K   ++           + + G
Sbjct: 486 GLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQASQKAQGDDEAQLIDENFCTSLEFG 545

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 546 LPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 580


>gi|156096490|ref|XP_001614279.1| lysine-tRNA ligase [Plasmodium vivax SaI-1]
 gi|148803153|gb|EDL44552.1| lysine-tRNA ligase, putative [Plasmodium vivax]
          Length = 585

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 100/560 (17%), Positives = 186/560 (33%), Gaps = 124/560 (22%)

Query: 23  LSGWVHRVRPHG-GIIFLDIRDHYGITQVVAN------PDSACFEIAKSVRSEWVLCIDG 75
           ++G + RV   G  + F D+       QV+AN        S   E    +R   ++ I G
Sbjct: 137 VTGRIMRVSASGQKLRFFDLVGDGAKIQVLANFAFHDHTKSNFAESYDKIRRGDIVGIVG 196

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
                           G++ +  ++  ILS    +    +G ++    IR + R+LDL  
Sbjct: 197 ---------FPGKSKKGELSIFPKETIILSPCLHMLPMKYGLKDT--EIRCRQRYLDLMI 245

Query: 136 DTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYA 193
           +   +   + RT+IIN +R  +  + FIE  TP +   +    AR F+          + 
Sbjct: 246 NENTRSTFITRTKIINYLRNFLNDKGFIEVETPTMNLVAGGASARPFITHHNDLDLDLF- 304

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  A +   ++L+  G D+ ++I   FR+E   +   P EF   +   ++ +  D++   
Sbjct: 305 LRIATELPLKMLIVGGIDKVYEIGKVFRNEGIDNTHNP-EFTSCEFYWAYADFYDLIKWS 363

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           E+    +         +               Y  D P+ ++P+ +              
Sbjct: 364 EDFFSSLVMHLFGTYKIL--------------YNKDGPE-KDPVEID---------FTPP 399

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMG 373
           + K+  V    ++     +    +    ++M                  L +   +    
Sbjct: 400 YPKVSIVEELEKLTNTKLEQPYDSPETINKM----------------INLIKENKIEMPN 443

Query: 374 P--VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH--IAQELGIINC 429
           P   AK L+ + +  I  +   Q     FFI   P      A   R+   + + L +  C
Sbjct: 444 PPTAAKLLDQLASHFIENKYPNQP----FFIIEHPQIMSPLAKYHRSKPGLTERLEMFIC 499

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
                            E        ++PF   +      K  +    +AFQ+D      
Sbjct: 500 GK---------------EVLNAYTELNDPFKQKECFSAQQKDREKGDAEAFQFD------ 538

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
                                                 + + G+PP GG+  GIDRI M 
Sbjct: 539 ---------------------------------ASFCTSLEYGLPPTGGLGLGIDRIAMF 565

Query: 550 LLGAKNVREVSLFPMSQNFC 569
           L     +++V LFP  +   
Sbjct: 566 LTNKNCIKDVILFPTMRPAS 585


>gi|254443736|ref|ZP_05057212.1| lysyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198258044|gb|EDY82352.1| lysyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 521

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 104/247 (42%), Gaps = 9/247 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +  +R  G   F+ I+D  GI Q+    D    +     +   +  I G+    
Sbjct: 93  VSVAGRLVVIRKMGKAQFVKIQDQAGIIQLYVRLDGIGADEYADFKKLDLGDIIGV---- 148

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E       TG+I + A +  ++S +   PLP           +++ R LDL  +   +
Sbjct: 149 --EGQLFQTKTGEISIRASRYALVSKSLR-PLPEKFHGLTDAEQKYRQRHLDLIMNKESR 205

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
                R+RI++ +R  +    F+E  TP+    +   A    V         + +  + +
Sbjct: 206 ERFFNRSRIVSGIRRYLEDRKFLEVETPVFQNIAGGAAAKPFVTHHNTLDRDFFMRISLE 265

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G+DR F+I   FR+E   S R   EF  L++  ++ +   ++  ++ ++R 
Sbjct: 266 LYLKRLLVGGYDRVFEIGRNFRNEGI-SRRHNPEFTMLEVYQAYSDYRGMMELIQGLIRH 324

Query: 260 VFEEFSN 266
           +  +   
Sbjct: 325 LVTDILG 331



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 72/200 (36%), Gaps = 31/200 (15%)

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
           G V   +        +  +  + GD  +F      K            A+ELG+     +
Sbjct: 340 GEVIDFMGEWREAKYKDLVCEKVGDPDWFSKSKEEKIAK---------AKELGLDCQADW 390

Query: 433 EFCWIMDFPFYEWNEEEKKID---------FAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           E   +        NE   K+            H P  +      +   +  + +    ++
Sbjct: 391 EDYEVT-------NEAFGKLIEPFLIQPTFVTHLPKELCPLAKITKDDDSTIDV----FE 439

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L   G EIA      +  +V  + F      +    +         + GMPP GG+  GI
Sbjct: 440 LCIGGMEIAPAYSEQNDPDVQREMFEKQAGEETQDMDE--DFLETLEYGMPPAGGLGMGI 497

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           DRIV+LL  A+N+R+V L+P
Sbjct: 498 DRIVILLTEAENIRDVILYP 517


>gi|327457844|gb|EGF04499.1| lysyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
          Length = 1081

 Score =  189 bits (481), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 102/563 (18%), Positives = 177/563 (31%), Gaps = 120/563 (21%)

Query: 7    HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626  HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67   SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686  HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127  KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
            + R+LDL  +   +  ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740  RQRYLDLIVNPSARGQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185  RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   Y L  AP+ Y + LM  G          F                        
Sbjct: 800  NAYDLDLY-LRIAPELYLKRLMVGGA------GRVF------------------------ 828

Query: 245  EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                           +   F N    + +       +A + YG         + M ++T 
Sbjct: 829  --------------EIGRNFRNEGADATHNPEFTMLEAYQAYGDY-------VQMRHLTR 867

Query: 305  HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                    + S   +   G  V     KG        D  NE           +    ++
Sbjct: 868  EM------ILSAARNATGGTVVRGRDRKGVEH---EIDLANE-----------WHVITVN 907

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            E         +++ L    T        +   +                 +   H+++ +
Sbjct: 908  EG--------ISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSEHV 959

Query: 425  GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                    E  +  DFP               +P T        L         A ++DL
Sbjct: 960  ------TVEPTFFCDFP------------TDVSPLTRQHRDDPRL---------AEKWDL 992

Query: 485  VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +  G E+ +         +  + F+   +                  A +  MPP GG+ 
Sbjct: 993  IIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMG 1052

Query: 541  AGIDRIVMLLLGAKNVREVSLFP 563
             G+DR+VM+L  A ++RE   FP
Sbjct: 1053 MGLDRLVMMLTNA-SIRETISFP 1074


>gi|28897287|ref|NP_796892.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839370|ref|ZP_01992037.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|260363583|ref|ZP_05776403.1| lysine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260876252|ref|ZP_05888607.1| lysine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260896430|ref|ZP_05904926.1| lysine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|31340436|sp|Q87SB1|SYK_VIBPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|28805496|dbj|BAC58776.1| lysyl-tRNA synthetase, heat inducible [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149747118|gb|EDM58106.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|308088407|gb|EFO38102.1| lysine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308092867|gb|EFO42562.1| lysine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308113326|gb|EFO50866.1| lysine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328472051|gb|EGF42928.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 505

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 66/285 (23%), Positives = 130/285 (45%), Gaps = 25/285 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R      FL I++  G  Q  A+      E+ K ++ ++     G ++  
Sbjct: 68  VAIAGRIMAKRGP----FLVIQETSGRIQAYADK-----EVQKELKEKYQGLDIGDIIGV 118

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                 +    G + ++ ++ E+L+ A   PLP        + +R++ R++DL  +   +
Sbjct: 119 KGALHKSG--KGDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSR 175

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N  V R+++++++R  MI++ F+E  TP++        AR F+          Y L  AP
Sbjct: 176 NAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMY-LRIAP 234

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L 
Sbjct: 235 ELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMDFTEELLS 293

Query: 259 GVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
            V  E     ++            + R+   +AI+ Y  D   ++
Sbjct: 294 SVALEVLGSTSMPYGEDTVEFGGKYARMSMFEAIKHYNPDHAQIQ 338



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 381 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 440

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP 
Sbjct: 441 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFPA 500

Query: 565 SQ 566
            +
Sbjct: 501 MR 502


>gi|229196430|ref|ZP_04323177.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228587067|gb|EEK45138.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 428

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 71/279 (25%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 1   MKRSLTKEC----TKQGGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 55

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G ++  +   +        +EL A ++++++ AE LP  +  ++  
Sbjct: 56  ---KVDVESVVHVIGEIVETTKTEL-------GVELLAHEVKVINGAEPLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVLSLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 224 EIGFINDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 262



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     ++  
Sbjct: 293 GDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTMPNKENPAITD 341

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F+  G+      ++F      F+ 
Sbjct: 342 S---------FDLLYKGLEITSGAQRIHNYEMLLASFNEKGLHP----DKFQSYLNTFRY 388

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 389 GCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 422


>gi|229091180|ref|ZP_04222403.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228692311|gb|EEL46047.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 432

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A F 
Sbjct: 5   MKRSLTKEC----TEKSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGF- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++  
Sbjct: 60  ---KVDVESIVHVIGEIVETSKTEL-------GVEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTMAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/164 (29%), Positives = 68/164 (41%), Gaps = 28/164 (17%)

Query: 406 PLKFCSFA--ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
             K+C  +   D      + LG      +  EF +I  +P             A   +TM
Sbjct: 287 KSKYCKESPVGDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTM 335

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P     S+  +         +DL+  G EI SG  R H  E++L +F   G+      ++
Sbjct: 336 PNNENSSITDS---------FDLLYKGLEITSGAQRIHNYEMLLDSFKEKGLHP----DK 382

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           F      F+ G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 383 FQSYLNTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|62896511|dbj|BAD96196.1| aspartyl-tRNA synthetase variant [Homo sapiens]
          Length = 501

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 87/379 (22%), Positives = 150/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL +      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--------- 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +         
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 118 ----REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                   +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F       N       F      LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    + ++ +    ++F +  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 345 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 394

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 395 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 445

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 446 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501


>gi|229121752|ref|ZP_04250973.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228661668|gb|EEL17287.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus 95/8201]
          Length = 432

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A F 
Sbjct: 5   MKRSLTKEC----TEKSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGF- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ A+ LP  +  ++  
Sbjct: 60  ---KVDVESIVHVIGEIVETSKTEL-------GVEVLAHEVKILNGADPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 69/164 (42%), Gaps = 28/164 (17%)

Query: 406 PLKFCSFA--ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
             K+C  +   D      + LG      +  EF +I+ +P             A   +TM
Sbjct: 287 KSKYCKESPVGDLDTEGEKLLGKYVKETYKSEFVFIIHYP-----------KEARPMYTM 335

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P     ++  +         +DL+  G EI SG  R H  E++L +F   G+      ++
Sbjct: 336 PNNENSAITDS---------FDLLYKGLEITSGAQRIHNYEMLLDSFKEKGLHP----DK 382

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           F      F+ G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 383 FQSYLNTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|119632023|gb|EAX11618.1| aspartyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
 gi|119632024|gb|EAX11619.1| aspartyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
          Length = 468

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 87/379 (22%), Positives = 150/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL +      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 17  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 76

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--------- 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +         
Sbjct: 77  KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 134

Query: 118 ----REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                   +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 135 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 194

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 195 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 252

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F       N       F      LR
Sbjct: 253 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 312

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    + ++ +    ++F +  K  L+V P Y + 
Sbjct: 313 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMP 372

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 373 DPRNPKQSNSYDMFMRGEE 391



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 312 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 361

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 362 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 412

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 413 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 468


>gi|255011239|ref|ZP_05283365.1| lysyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313149051|ref|ZP_07811244.1| lysyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313137818|gb|EFR55178.1| lysyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 575

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 59/302 (19%), Positives = 126/302 (41%), Gaps = 19/302 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +    +    V ++G +   R  G   F++++D  G  QV    D  C   
Sbjct: 36  NAFSTDIKAEFKDDEAPRQVSVAGRMMSRRVMGKASFIELQDSKGRIQVYITRDDICPGE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + AQK+ +L+ + +    V  +    
Sbjct: 96  DKEMYNTVFKRLLDLGDFIGIEGFVFRTQMGEISIHAQKLTVLAKSIKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R++DL  +  +    +KR+++ +SMR    ++ ++E  TPIL A + 
Sbjct: 156 YDSFEDPELRYRQRYVDLAVNEGIKDIFMKRSKVYSSMREYFNSKGYMEVETPILQAIAG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y +  A + Y + L+  GF+  ++I   FR+E       P E
Sbjct: 216 GAAARPFMTHHNALDIPLY-MRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFS---------NGNTVSNNFLRICYDDAIR 284
           F  +++ +++ + + ++   E ++  +  + +         N       + R+   DAI+
Sbjct: 274 FTCMEIYVAYKDYNWMMEFTEKMIEKICLDVNGTTEVKVGDNIINFKAPYRRVTMLDAIK 333

Query: 285 RY 286
            +
Sbjct: 334 EH 335



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+ +     +     L+ F
Sbjct: 378 EGTYIQPTFITDYPIEMSPLTKKHRTNPELTERFELMVNGKELCNAYSELNDPIDQLERF 437

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +     E  ++          RA + GMPP  G+  G+DR+ ML+ G   ++EV  FP 
Sbjct: 438 EDQMKLSEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFPQ 497

Query: 565 SQ 566
            +
Sbjct: 498 MR 499


>gi|313816675|gb|EFS54389.1| lysyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|315099121|gb|EFT71097.1| lysyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
          Length = 1081

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 102/563 (18%), Positives = 178/563 (31%), Gaps = 120/563 (21%)

Query: 7    HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626  HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67   SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686  HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127  KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
            + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740  RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185  RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   Y L  AP+ Y + LM  G          F                        
Sbjct: 800  NAYDLDLY-LRIAPELYLKRLMVGGA------GRVF------------------------ 828

Query: 245  EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                           +   F N    + +       +A + YG         + M ++T 
Sbjct: 829  --------------EIGRNFRNEGADATHNPEFTMLEAYQAYGDY-------VQMRHLTR 867

Query: 305  HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                    + S   +   G  V     KG        D  NE           +    ++
Sbjct: 868  EM------ILSAARNATGGTVVRGRDRKGVEH---EIDLANE-----------WHVITVN 907

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            E         +++ L    T        +   +                 +   H+++ +
Sbjct: 908  EG--------ISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSEHV 959

Query: 425  GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                    E  +  DFP               +P T        L         A ++DL
Sbjct: 960  ------TVEPTFFCDFP------------TDVSPLTRQHRDDPRL---------AEKWDL 992

Query: 485  VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +  G E+ +         +  + F+   +                  A +  MPP GG+ 
Sbjct: 993  IIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMG 1052

Query: 541  AGIDRIVMLLLGAKNVREVSLFP 563
             G+DR+VM+L  A ++RE   FP
Sbjct: 1053 MGLDRLVMMLTNA-SIRETISFP 1074


>gi|189499923|ref|YP_001959393.1| lysyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189495364|gb|ACE03912.1| lysyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 515

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 64/332 (19%), Positives = 122/332 (36%), Gaps = 27/332 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +  +R  G   F  I+D  G  Q+    D    E  K+ +   +  I G+  
Sbjct: 69  ETVAVAGRIMTLRKMGKASFFHIQDTEGKIQIYIKRDEVGQESYKTFKLLDIGDIVGI-- 126

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----------YPESIRFKY 128
               +       TG+I + AQ+ ++LS +         +              +  R++ 
Sbjct: 127 ----KGYTFRTKTGEISIHAQEFQLLSKSLRPIPVAKEKEVDGKKVTYDAFSDKETRYRQ 182

Query: 129 RFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R++DL  +   K   +KR+ II+ MR       ++E  TPIL       A          
Sbjct: 183 RYVDLIVNPEVKETFIKRSAIISFMRNFFSERGYLEVETPILQPVYGGAAARPFTTHHNA 242

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
                 L  A + + + L+  GFD  F+ A  FR+E       P EF Q+++ +++ +  
Sbjct: 243 LNMELYLRIANELFLKRLIVGGFDGVFEFAKDFRNEGIDRFHNP-EFTQVELYVAYKDYY 301

Query: 248 DILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            ++  +E ++       S             +   + RI    AI+ Y       ++   
Sbjct: 302 WMMELVEELIYRTNLAISASESTTFLGHEINLKPPYRRISIAAAIQEYCAVDIRDKSETE 361

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           + N  +    S     S    ++  +  +  P
Sbjct: 362 LRNTAKDLGLSLDPKISSGKIIDEIFGEFVEP 393



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 6/150 (4%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++LG+          I+D  F E+ E   K+         P       K +        
Sbjct: 366 AKDLGLSLDPKISSGKIIDEIFGEFVE--PKLIQPTFIIDYPTEMSPLAKEHRSEKGVVE 423

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L+  G E+ +     +   V  +        +   ++          RA + GMPP 
Sbjct: 424 RFELIVGGKELCNSFSELNDPVVQRERLEAQAKLRLRGDDEAMIVDEDFLRALEYGMPPC 483

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+  G+DR+VMLL G  ++R+V  FP  +
Sbjct: 484 AGLGIGVDRLVMLLTGQDSIRDVIFFPHMK 513


>gi|332707301|ref|ZP_08427354.1| asparaginyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332354035|gb|EGJ33522.1| asparaginyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 462

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 73/384 (19%), Positives = 129/384 (33%), Gaps = 52/384 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSE 68
           L        + + GWV   R      F+++ D   +   QVV NPD + +E I K + + 
Sbjct: 10  LRNGQPDQSLTIQGWVRTKRELKDFAFMEVNDGSSMANLQVVLNPDLSDYETILKRLNTG 69

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G+++    +         +IE+ A  + +   A+        ++ +        
Sbjct: 70  SSVEVTGILVESLGKG-------QRIEVKASSVTVYGEADANYPLQ--KKRHSFEFLRTI 120

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +TL      R    N++        F+   TPI+TAS  EGA +    + ++ 
Sbjct: 121 SHLRSRTNTLGAVFRVRNACSNAIHQFFQERGFLWVHTPIITASDCEGAGELFSVTNLDL 180

Query: 189 G--------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+  P       Q +  +MA  F   +   P FR E+  + R  
Sbjct: 181 KNIPKTDNQAVDYTQDFFGRPTYLTVSGQLEAEIMAMAFRDVYTFGPTFRAENSNTSRHL 240

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS-------------------- 271
            EF+ ++ EM+F +    ++  E  L+ VF+                             
Sbjct: 241 AEFWMVEPEMAFCDLKGDMDLAEAFLKHVFKSVLENCPEDLEFFNKRIDNNVLATADNII 300

Query: 272 -NNFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            N F RI Y DAI             +       +EH  +    +F K + V        
Sbjct: 301 NNQFERITYTDAIALLEKTDRKFEYAVSWGVDLQSEHERYLAEELFKKPVIVTDYPVEIK 360

Query: 329 IPAKGGGGNRAFCDRMNEWARSQG 352
                   ++     M+  A   G
Sbjct: 361 AFYMRLNDDQKTVAAMDVLAPRIG 384



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 30/157 (19%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
               ++   ++A+EL        +   + D+P                 F M        
Sbjct: 331 VDLQSEHERYLAEELFK------KPVIVTDYP------------VEIKAFYM-------- 364

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
           + ND     A    L     EI  G  R    +++ +   N G++ E +           
Sbjct: 365 RLNDDQKTVAAMDVLAPRIGEIIGGAQREERLDILEKRIQNQGMNPEDLW----WYLDLR 420

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + G  PH G   G +R+V  + G  N+R+V  FP + 
Sbjct: 421 RYGTVPHAGFGLGFERLVQFMTGMGNIRDVIPFPRTP 457


>gi|93006235|ref|YP_580672.1| lysyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|123264560|sp|Q1QAW5|SYK_PSYCK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|92393913|gb|ABE75188.1| lysyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 514

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 66/309 (21%), Positives = 123/309 (39%), Gaps = 39/309 (12%)

Query: 4   YRTHSCGDLGVSDVG---------------SFVRLSGWVHRVRPHGGIIFLDIRDHYGIT 48
            RT    DL  +  G               + V ++G V   R      F+ I+D  G  
Sbjct: 47  KRTDYAQDLQAAFEGISKQEIADNDAKGEKTQVNVAGRVMLNRG----AFIVIQDMTGRI 102

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
           Q+         +    ++S  +  I G+               G + +  ++IE+L+ A 
Sbjct: 103 QLYVARKELDEKTLADIKSLDLGDIVGV------SGYIGRSGKGDLYVHIEEIELLTKAL 156

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
             P+P           R++ R LDL  + T     + R+++I+ +R  M+ E F+E  TP
Sbjct: 157 R-PMPNKFHGLADVEARYRNRHLDLMTNETTRDTFMVRSQVISGIRKFMLNERFMEVETP 215

Query: 168 ILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           ++        AR F+          Y L  AP+ Y + L+  GF++ F+I   FR+E   
Sbjct: 216 MMHPIPGGAVARPFVTHHNALDMPLY-LRIAPELYLKRLVVGGFEKVFEINRSFRNEGVS 274

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRI 277
           +   P EF  ++   ++ +  D+++  E +   +  +      ++           F+R+
Sbjct: 275 TRHNP-EFTMIEFYQAYADYHDLMDLTERLFNELATDILGTTEITYQEEAISLKAPFIRL 333

Query: 278 CYDDAIRRY 286
              DAI +Y
Sbjct: 334 SMSDAIAKY 342



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 5/129 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E  ++         P       + +D       +++L   G E+A+G    +  E
Sbjct: 383 FEETAE-HQLRQPTFITEYPAETSPLARRSDDNPEITDRFELFVGGRELANGFSELNDPE 441

Query: 503 VMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F      K+  ++           A   G+PP  G   GIDR+VMLL  + ++R+
Sbjct: 442 DQAERFLGQVAEKDAGDDEAMHFDAEYIEALSYGLPPTAGEGIGIDRLVMLLTDSASIRD 501

Query: 559 VSLFPMSQN 567
           V LFP  + 
Sbjct: 502 VILFPHMRR 510


>gi|115447385|ref|NP_001047472.1| Os02g0623500 [Oryza sativa Japonica Group]
 gi|48716234|dbj|BAD23770.1| putative lysyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113537003|dbj|BAF09386.1| Os02g0623500 [Oryza sativa Japonica Group]
 gi|215694818|dbj|BAG90009.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 586

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 65/326 (19%), Positives = 132/326 (40%), Gaps = 30/326 (9%)

Query: 5   RTHSCGDLGVS----DVGSF-----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           RTH+  +L       + G       V ++G +   R  G ++F+ +RD  G  Q+    D
Sbjct: 99  RTHTTKELQDGYTHLENGEVCADVAVSIAGRIVARRAFGKLVFMTVRDDSGTIQLYCEKD 158

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           S   E  + +++   +          A         G++ +  +  EIL+ +  LPLP  
Sbjct: 159 SLTEEQFEQLKTIIDIG-----DIIGANGSIKKTEKGELSVYVKNFEILTKSL-LPLPDK 212

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSP 174
                    R++ R++D+  +    ++ + R + ++ +R  M +  FIE  TP+L  ++ 
Sbjct: 213 YHGLTDVDKRYRQRYVDMIANPEVADVFRTRAKAVSEIRKTMESFGFIEVETPVLQGAAG 272

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+      Q   Y L  A + + + ++  G ++ ++I   FR+E   +   P E
Sbjct: 273 GAEARPFITHHNSLQRDLY-LRIATELHLKRMLVGGLEKVYEIGRIFRNEGISTRHNP-E 330

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  ++M  ++ + + ++N  E ++            V      I  +   RR        
Sbjct: 331 FTTIEMYEAYSDYESMMNLAEEIVTRCAMATHGKLRVDYQGTEISLERPWRRE------- 383

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILS 319
                MH++ +     +F  F + L 
Sbjct: 384 ----TMHSLVKEATGIDFNSFGEDLE 405



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 39/111 (35%), Gaps = 23/111 (20%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----------------VE 519
           +    +++L   G EI +              F N                        E
Sbjct: 470 AGLTERFELFICGREIGNAFSELTDPIDQRGRFENQIKQHNAKRAAMTKEVKSTEGKHEE 529

Query: 520 NRFGG-------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + F            + + GMPP  G+  GIDR+VMLL  + ++R+V  FP
Sbjct: 530 DDFSYEVTLDEDFLTSLEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFP 580


>gi|224056100|ref|XP_002194194.1| PREDICTED: aspartyl-tRNA synthetase [Taeniopygia guttata]
          Length = 547

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 70/302 (23%), Positives = 122/302 (40%), Gaps = 24/302 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL +      V + G +H  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 96  DLTLEKADEEVWVRGRIHTSRAKGKQCFLVLRQQQFNIQALVAVGQHASKQMVKFAANIT 155

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ I+G+V  R A           +EL  Q+I ++S AE        +   PE    
Sbjct: 156 KESIVDIEGVV--RKAHQKIGGCTQQDVELHVQRIYVISSAEPRLPLQLDDAVRPEVEGE 213

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R +DLR  T       ++ I    R  +I + F+E  TP + +++
Sbjct: 214 EDGRATVNQDTRLDNRIIDLRTSTSQAIFCLQSGICQLFRETLIRKGFVEIQTPKIISAA 273

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F + P FR ED  + R   E
Sbjct: 274 SEGGANVFTVSYFKTSAYLA--QSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHLTE 331

Query: 234 FYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           F  LD+EM+F     ++++ + + L  +F+              +        +   +P 
Sbjct: 332 FVGLDIEMAFNYHYHEVVDEIADTLVQIFKGL--QERFQTEIQTVSKQFPCEPFKFLEPT 389

Query: 293 LR 294
           LR
Sbjct: 390 LR 391



 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF TMP                +  YD+   G EI SG  R H  +++ +   
Sbjct: 439 KYPLAVRPFYTMPDPANPK---------TSNSYDMFMRGEEILSGAQRIHDPQLLTERAK 489

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           + GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP      
Sbjct: 490 HHGIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRDPKRL 545

Query: 570 DL 571
             
Sbjct: 546 TP 547


>gi|327334150|gb|EGE75864.1| lysine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 1081

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 102/563 (18%), Positives = 178/563 (31%), Gaps = 120/563 (21%)

Query: 7    HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626  HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67   SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686  HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127  KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
            + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740  RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185  RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   Y L  AP+ Y + LM  G          F                        
Sbjct: 800  NAYDLDLY-LRIAPELYLKRLMVGGA------GRVF------------------------ 828

Query: 245  EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                           +   F N    + +       +A + YG         + M ++T 
Sbjct: 829  --------------EIGRNFRNEGADATHNPEFTMLEAYQAYGDY-------VQMRHLTR 867

Query: 305  HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                    + S   +   G  V     KG        D  NE           +    ++
Sbjct: 868  EM------ILSAARNATGGTVVRGRDRKGVEH---EIDLANE-----------WHVITVN 907

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            E         +++ L    T        +   +                 +   H+++ +
Sbjct: 908  EG--------ISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSEHV 959

Query: 425  GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                    E  +  DFP               +P T        L         A ++DL
Sbjct: 960  ------TVEPTFFCDFP------------TDVSPLTRQHRDDPRL---------AEKWDL 992

Query: 485  VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +  G E+ +         +  + F+   +                  A +  MPP GG+ 
Sbjct: 993  IIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMG 1052

Query: 541  AGIDRIVMLLLGAKNVREVSLFP 563
             G+DR+VM+L  A ++RE   FP
Sbjct: 1053 MGLDRLVMMLTNA-SIRETISFP 1074


>gi|314919392|gb|EFS83223.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
          Length = 1081

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 102/563 (18%), Positives = 178/563 (31%), Gaps = 120/563 (21%)

Query: 7    HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626  HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67   SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686  HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPLRRSGFNDPE-AKV 739

Query: 127  KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
            + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740  RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185  RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   Y L  AP+ Y + LM  G          F                        
Sbjct: 800  NAYDLDLY-LRIAPELYLKRLMVGGA------GRVF------------------------ 828

Query: 245  EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                           +   F N    + +       +A + YG         + M ++T 
Sbjct: 829  --------------EIGRNFRNEGADATHNPEFTMLEAYQAYGDY-------VQMRHLTR 867

Query: 305  HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                    + S   +   G  V     KG        D  NE           +    ++
Sbjct: 868  EM------ILSAARNATGGTVVRGRDRKGVEH---EIDLANE-----------WHVITVN 907

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            E         +++ L    T        +   +                 +   H+++ +
Sbjct: 908  EG--------ISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSEHV 959

Query: 425  GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                    E  +  DFP               +P T        L         A ++DL
Sbjct: 960  ------TVEPTFFCDFP------------TDVSPLTRQHRDDPRL---------AEKWDL 992

Query: 485  VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +  G E+ +         +  + F+   +                  A +  MPP GG+ 
Sbjct: 993  IIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMG 1052

Query: 541  AGIDRIVMLLLGAKNVREVSLFP 563
             G+DR+VM+L  A ++RE   FP
Sbjct: 1053 MGLDRLVMMLTNA-SIRETISFP 1074


>gi|254229663|ref|ZP_04923073.1| lysyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262395206|ref|YP_003287060.1| lysyl-tRNA synthetase (class II) [Vibrio sp. Ex25]
 gi|151937784|gb|EDN56632.1| lysyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338800|gb|ACY52595.1| lysyl-tRNA synthetase (class II) [Vibrio sp. Ex25]
          Length = 505

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 64/285 (22%), Positives = 130/285 (45%), Gaps = 25/285 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R      FL I++  G  Q  A  D     + K ++ ++     G ++  
Sbjct: 68  VAIAGRIMAKRGP----FLVIQETSGRIQAYAAKD-----VQKELKEKYQGLDIGDIIGV 118

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                 +    G + ++ ++ E+L+ A   PLP        + +R++ R++DL  +   +
Sbjct: 119 KGALHKSG--KGDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSR 175

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
              + R+++++++R  MI++ F+E  TP++        AR F+          Y L  AP
Sbjct: 176 KAFIVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMY-LRIAP 234

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L 
Sbjct: 235 ELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMDFTEELLS 293

Query: 259 GVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
            V +E     ++            + R+   +AI++Y  D   ++
Sbjct: 294 SVAQEVLGSTSMPYGDETVEFGGTYTRMSMFEAIKQYNPDHAQIQ 338



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 381 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 440

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP 
Sbjct: 441 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFPA 500

Query: 565 SQ 566
            +
Sbjct: 501 MR 502


>gi|116749903|ref|YP_846590.1| asparaginyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|226695302|sp|A0LL53|SYN_SYNFM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116698967|gb|ABK18155.1| asparaginyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 466

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 69/346 (19%), Positives = 124/346 (35%), Gaps = 45/346 (13%)

Query: 15  SDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             +G  VR  GWV   R    G+ F+++ D   +  +    D    E  + + S      
Sbjct: 16  EYIGKTVRAQGWVRTKRDSKAGVSFIELNDGSCLRNLQVVADQGHPEYRQLLES----IT 71

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +        +      IEL A +I +   A+    P+  +R   E +R +   L  
Sbjct: 72  TGCAVMVEGSIAYSPGKGQTIELKADRITLYGTADPAVYPLQKKRHSFEFLR-QIGHLRP 130

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN------ 187
           R +T+      R R+  ++        F    TPI+TAS  EGA +    + ++      
Sbjct: 131 RTNTIGAVSRVRNRLSYAIHQFFQDRGFYYIHTPIITASDCEGAGEMFRVTTLDAQNAPA 190

Query: 188 -------QGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                  +  F+  P       Q +  + A    R +   P FR E+  + R   EF+ +
Sbjct: 191 KVPEEVYRADFFGKPAFLTVSGQLQAEIYALALGRVYTFGPTFRAENSNTSRHLAEFWMV 250

Query: 238 DMEMSFVEQDDILNTMENVLRGVF-EEFSNGNTVSNNFLR-------------------- 276
           + EM+F + +  L   + ++R +      +     + F R                    
Sbjct: 251 EPEMAFCDLEGDLEIAQALIRHLIGVALQDCAEDLDFFTRFIEPTLRGTLETVAFSPFET 310

Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHN--VTEHFVHSEFRVFSKILSV 320
           + Y +A+R       +   P+   N    EH  +   +VF K  +V
Sbjct: 311 VTYTEAVRILKESGENFEFPVEWGNDLQAEHERYLTEKVFRKPAAV 356



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 12/116 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
               A  PF M        + ND  +  A    LV    EI  G  R    +++++    
Sbjct: 358 HFPRALKPFYM--------RVNDDGNTVAAMDILVPGTGEIIGGSQREERPDILVEQMRL 409

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             ++ E  +          + G  PH G   G++R+V  + G  N+REV  FP + 
Sbjct: 410 KSVAPEDYK----WYLDLREFGSVPHAGFGMGLERLVQFVTGLPNIREVIPFPRTP 461


>gi|289428675|ref|ZP_06430358.1| lysine--tRNA ligase [Propionibacterium acnes J165]
 gi|289158073|gb|EFD06293.1| lysine--tRNA ligase [Propionibacterium acnes J165]
 gi|313808046|gb|EFS46527.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313819615|gb|EFS57329.1| lysyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313822061|gb|EFS59775.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313823704|gb|EFS61418.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313826027|gb|EFS63741.1| lysyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|314924758|gb|EFS88589.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314961955|gb|EFT06056.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314978937|gb|EFT23031.1| lysyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|315083622|gb|EFT55598.1| lysyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315087044|gb|EFT59020.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315089219|gb|EFT61195.1| lysyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|327329638|gb|EGE71394.1| lysine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327446323|gb|EGE92977.1| lysyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|328752465|gb|EGF66081.1| lysyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
          Length = 1081

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 102/563 (18%), Positives = 178/563 (31%), Gaps = 120/563 (21%)

Query: 7    HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626  HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67   SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686  HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127  KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
            + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740  RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185  RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   Y L  AP+ Y + LM  G          F                        
Sbjct: 800  NAYDLDLY-LRIAPELYLKRLMVGGA------GRVF------------------------ 828

Query: 245  EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                           +   F N    + +       +A + YG         + M ++T 
Sbjct: 829  --------------EIGRNFRNEGADATHNPEFTMLEAYQAYGDY-------VQMRHLTR 867

Query: 305  HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                    + S   +   G  V     KG        D  NE           +    ++
Sbjct: 868  EM------ILSAARNATGGTVVRGRDRKGVEH---EIDLANE-----------WHVITVN 907

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            E         +++ L    T        +   +                 +   H+++ +
Sbjct: 908  EG--------ISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSEHV 959

Query: 425  GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                    E  +  DFP               +P T        L         A ++DL
Sbjct: 960  ------TVEPTFFCDFP------------TDVSPLTRQHRDDPRL---------AEKWDL 992

Query: 485  VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +  G E+ +         +  + F+   +                  A +  MPP GG+ 
Sbjct: 993  IIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMG 1052

Query: 541  AGIDRIVMLLLGAKNVREVSLFP 563
             G+DR+VM+L  A ++RE   FP
Sbjct: 1053 MGLDRLVMMLTNA-SIRETISFP 1074


>gi|314986621|gb|EFT30713.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314990977|gb|EFT35068.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
          Length = 1081

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 102/563 (18%), Positives = 178/563 (31%), Gaps = 120/563 (21%)

Query: 7    HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626  HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67   SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686  HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127  KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
            + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740  RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185  RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   Y L  AP+ Y + LM  G          F                        
Sbjct: 800  NAYDLDLY-LRIAPELYLKRLMVGGA------GRVF------------------------ 828

Query: 245  EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                           +   F N    + +       +A + YG         + M ++T 
Sbjct: 829  --------------EIGRNFRNEGADATHNPEFTMLEAYQAYGDY-------VQMRHLTR 867

Query: 305  HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                    + S   +   G  V     KG        D  NE           +    ++
Sbjct: 868  EM------ILSAARNATGGTVVRGRDRKGVEH---EIDLANE-----------WHVITVN 907

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            E         +++ L    T        +   +                 +   H+++ +
Sbjct: 908  EG--------ISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSEHV 959

Query: 425  GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                    E  +  DFP               +P T        L         A ++DL
Sbjct: 960  ------TVEPTFFCDFP------------TDVSPLTRQHRDDPRL---------AEKWDL 992

Query: 485  VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +  G E+ +         +  + F+   +                  A +  MPP GG+ 
Sbjct: 993  IIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMG 1052

Query: 541  AGIDRIVMLLLGAKNVREVSLFP 563
             G+DR+VM+L  A ++RE   FP
Sbjct: 1053 MGLDRLVMMLTNA-SIRETISFP 1074


>gi|256844836|ref|ZP_05550294.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|294785883|ref|ZP_06751171.1| lysine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|256718395|gb|EEU31950.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|294487597|gb|EFG34959.1| lysine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 493

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 60/314 (19%), Positives = 124/314 (39%), Gaps = 16/314 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + +G +  +R  G + F  I D  G  Q+    D    E    +     +   G ++   
Sbjct: 57  KTAGRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNV---GDIIGLE 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E    +  T ++ L  + I +L+      LP          IR++ R++DL  +   ++
Sbjct: 114 GELFITH--TEELTLRVKSIALLTK-NVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRD 170

Query: 142 -IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQ 199
             +KRT+I+ ++R  +    F+E  TPI+        A+ F+          Y L  AP+
Sbjct: 171 TFIKRTKIVKAIRKYLDDRGFLEVETPIMHPILGGAAAKPFITHHNTLNIDLY-LRIAPE 229

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R + +   FR+E   +   P EF  +++  +  +  D+++  E ++  
Sbjct: 230 LYLKKLIVGGFERVYDLNRNFRNEGISTRHNP-EFTMVELYQAHADFHDMMDLCEGIISS 288

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP------DLRNPIIMHNVTEHFVHSEFRV 313
           V +E +    +  + +++   +  R +  D        D    +      +        V
Sbjct: 289 VCQEVNGTTDIEYDGVKLSLKNFARVHMVDMIKEVTGVDFWKEMTFEEAKQIAKEHHIEV 348

Query: 314 FSKILSVNPGYEVW 327
              + SV      +
Sbjct: 349 ADHMNSVGHIINEF 362



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + +  D  +    +++L  N  E A+     +  
Sbjct: 362 FFEQKCEEKVIQPTFVYGHPVEISPLAKRNEDNPNF-TDRFELFINKREYANAFTELNDP 420

Query: 502 EVML-----QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                    Q    +  ++E           A + G+PP GG+  GIDR+VMLL GA ++
Sbjct: 421 ADQRGRFESQVEEAMHGNEEATPEIDESFVEALEYGLPPTGGLGIGIDRLVMLLTGAPSI 480

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 481 RDVILFPQMK 490


>gi|295131136|ref|YP_003581799.1| lysine--tRNA ligase [Propionibacterium acnes SK137]
 gi|291375349|gb|ADD99203.1| lysine--tRNA ligase [Propionibacterium acnes SK137]
 gi|313763493|gb|EFS34857.1| lysyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313793883|gb|EFS41907.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313801274|gb|EFS42525.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313813494|gb|EFS51208.1| lysyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313840003|gb|EFS77717.1| lysyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314920700|gb|EFS84531.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314930579|gb|EFS94410.1| lysyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314968411|gb|EFT12509.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|315081159|gb|EFT53135.1| lysyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315100396|gb|EFT72372.1| lysyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315106910|gb|EFT78886.1| lysyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|315109100|gb|EFT81076.1| lysyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327452090|gb|EGE98744.1| lysyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
 gi|327454872|gb|EGF01527.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|328755296|gb|EGF68912.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
          Length = 1081

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 102/563 (18%), Positives = 178/563 (31%), Gaps = 120/563 (21%)

Query: 7    HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626  HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67   SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686  HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127  KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
            + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740  RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185  RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   Y L  AP+ Y + LM  G          F                        
Sbjct: 800  NAYDLDLY-LRIAPELYLKRLMVGGA------GRVF------------------------ 828

Query: 245  EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                           +   F N    + +       +A + YG         + M ++T 
Sbjct: 829  --------------EIGRNFRNEGADATHNPEFTMLEAYQAYGDY-------VQMRHLTR 867

Query: 305  HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                    + S   +   G  V     KG        D  NE           +    ++
Sbjct: 868  EM------ILSAARNATGGTVVRGRDRKGVEH---EIDLANE-----------WHVITVN 907

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            E         +++ L    T        +   +                 +   H+++ +
Sbjct: 908  EG--------ISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSEHV 959

Query: 425  GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                    E  +  DFP               +P T        L         A ++DL
Sbjct: 960  ------TVEPTFFCDFP------------TDVSPLTRQHRDDPRL---------AEKWDL 992

Query: 485  VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +  G E+ +         +  + F+   +                  A +  MPP GG+ 
Sbjct: 993  IIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMG 1052

Query: 541  AGIDRIVMLLLGAKNVREVSLFP 563
             G+DR+VM+L  A ++RE   FP
Sbjct: 1053 MGLDRLVMMLTNA-SIRETISFP 1074


>gi|229525317|ref|ZP_04414722.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae bv. albensis
           VL426]
 gi|229338898|gb|EEO03915.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae bv. albensis
           VL426]
          Length = 510

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 64/292 (21%), Positives = 132/292 (45%), Gaps = 25/292 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G V   R      FL I++  G  Q  A+      E+ + ++ ++    
Sbjct: 66  LEALNHVVSIAGRVMAKRGP----FLVIQETSGRIQAYASK-----EVQQELKDKYQGLD 116

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++        +    G + ++ ++ ++L+ A   PLP        + +R++ R++DL
Sbjct: 117 IGDIIGVQGALHKSG--KGDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 173

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  + R+++++++R  MI++ F+E  TP++        AR F+          
Sbjct: 174 IVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPM 233

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++
Sbjct: 234 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMD 291

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
             E +L  V  E     ++            + R+   DAI+ Y  +   ++
Sbjct: 292 LTEELLSSVALEVLGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAHIQ 343



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 386 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 445

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 446 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504


>gi|149773189|dbj|BAF64769.1| Lysyl-tRNA synthase class II [Shewanella livingstonensis]
          Length = 497

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 63/311 (20%), Positives = 130/311 (41%), Gaps = 35/311 (11%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R+H   +L                    ++G V   R      FL I+D  G  Q  A  
Sbjct: 34  RSHKAAELQAQYGEQTKEALEELAFQTSIAGRVMAKRGP----FLVIQDVSGRIQAYAGK 89

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                     ++  +     G ++    +   +    G + ++ ++ ++L+ A   PLP 
Sbjct: 90  PVQG-----DLKERYQGLDIGDIIGVKGQLHLSG--KGDLYVNMEEYQLLTKALR-PLPE 141

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R++DL  +   +N  + R++++ ++R  M+ + F+E  TP++    
Sbjct: 142 KFHGLTDQETRYRQRYVDLIVNEDSRNAFIMRSKVVAAIRNFMVKKEFMEVETPMMHVIP 201

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+        + Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 202 GGASARPFVTHHNALDMAMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNP 259

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  ++  M++ +  D+++  E +L  + +E     ++            + R+   +AI
Sbjct: 260 EFTMMEFYMAYADYKDLMDLTEEMLGSIAQELLGSTSMPYGEETVEFGGAYARLSMLEAI 319

Query: 284 RRYGTDKPDLR 294
           ++Y  D   ++
Sbjct: 320 QKYNPDNATIQ 330



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + ND       +++    G E+A+G    + +E     F
Sbjct: 373 ETKLMQPTFITGYPADISPLARRNDNNDFITDRFEFFIGGREVANGFSELNDAEDQDNRF 432

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K+  ++           A + G+PP  G   GIDR+VML      +R+V LFP 
Sbjct: 433 KAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFPA 492

Query: 565 SQ 566
            +
Sbjct: 493 MR 494


>gi|22300015|ref|NP_683262.1| asparaginyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|38258369|sp|Q8DG51|SYN_THEEB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|22296200|dbj|BAC10024.1| asparaginyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 462

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 58/290 (20%), Positives = 104/290 (35%), Gaps = 22/290 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L    VG  + + GWV   R      F+++ D   +  +             +       
Sbjct: 9   LHQGQVGDRITVKGWVRTKRELKECTFVNLNDGSTLAGLQV----VIPNTVAAATPTMKD 64

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G     + E + +      IEL A++I +   A+    P+  +R   E +R     L
Sbjct: 65  LTTGAAAEFTGELVRSPGKNQAIELHAEEIHLWGTADPETYPLQKKRHSFEFLR-TIAHL 123

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +TL   +  R     ++        F+   TPI+TAS  EGA +    + ++    
Sbjct: 124 RPRTNTLGAVMRVRNACATAIHQFFQERGFLWVHTPIITASDCEGAGELFTVTTLDLTQP 183

Query: 190 ------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q +  +MA+ F   +   P FR E+  + R   EF
Sbjct: 184 PKTPEGKIDFSQDFFGRRAYLTVSGQLEAEIMATAFTNVYTFGPTFRAENSNTSRHLAEF 243

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           + ++ EM+F +    +   E  L+ VF    +       F +   D ++ 
Sbjct: 244 WMVEPEMAFCDLRGDMELAEAFLQFVFRYVLDHCPEDMAFFQERIDHSVM 293



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 38/116 (32%), Gaps = 12/116 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
               A   F M        + ND     A    L     EI  G  R    +V+ +    
Sbjct: 354 DYPAAIKAFYM--------RLNDDGKTVAAMDILAPKIGEIIGGSQREERFDVLQERIVT 405

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+                + G  PH G   G +R+V  + G  N+R+V  FP + 
Sbjct: 406 QGLDPAPYW----WYLDLRRYGSVPHAGFGLGFERLVQFMTGMDNIRDVIPFPRTP 457


>gi|114581044|ref|XP_515810.2| PREDICTED: aspartyl-tRNA synthetase isoform 5 [Pan troglodytes]
 gi|114581046|ref|XP_001155169.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 4 [Pan
           troglodytes]
          Length = 501

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 88/379 (23%), Positives = 150/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL +      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--------- 117
            E ++ I+G+V  R       +     +EL  QKI ++S+AE        +         
Sbjct: 110 KESIVDIEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 118 ----REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                   +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F       N       F      LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    + ++ +    ++F +  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 345 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 394

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 395 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 445

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 446 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501


>gi|227894509|ref|ZP_04012314.1| lysine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227863668|gb|EEJ71089.1| lysine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 520

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 63/321 (19%), Positives = 119/321 (37%), Gaps = 20/321 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L         +++G +   R  G + F D+ D  G  Q+    D    + 
Sbjct: 49  KKYGNEDKDELNEDMP--KTKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDN 106

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  +   +    G+      E       TG++ + A  +  LS A   PLP        
Sbjct: 107 YKIFKKSDIGDFLGI------EGEVMKTDTGELTIRALHVTFLSKALR-PLPDKYHGLKD 159

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
               ++ R+LDL  +         RT+II ++R  +  ++F+E  TP+L        AR 
Sbjct: 160 VEAIYRQRYLDLITNRDSYMRFVHRTQIIQAIRDYLNGQDFLEVETPVLHNIPGGAEARP 219

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  A +   + L+    +R ++I   FR+E   +   P EF +L+ 
Sbjct: 220 FITHHNALDIDLY-MRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELES 277

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PD 292
             ++ +  D+++  E ++R   +  S    ++     I      RR             D
Sbjct: 278 YAAYWDFHDVMDEAEGIIRAAAKVVSPDGKITYQGQNIDLGKPFRRVHMVDLIKEKTGVD 337

Query: 293 LRNPIIMHNVTEHFVHSEFRV 313
              P+ +   T+     +  V
Sbjct: 338 FWKPMTLEEATKIAEDHDIHV 358



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 6/153 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IA++  I     ++   I++  F+E   EE  +D         +    + K  D    
Sbjct: 348 TKIAEDHDIHVEKFWKVGHIINA-FFEKYCEETIVDPTFVYGHPVEISPLAKKNAD-DPR 405

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGM 533
              ++++   G E  +     +  +     F      +E   +          RA + GM
Sbjct: 406 FTDRFEIYIMGEEYGNAFSELNDPDDQRARFEAQMEEREAGNDEADMIDEDYLRAMEYGM 465

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 466 PPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 498


>gi|289426405|ref|ZP_06428148.1| lysine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289153133|gb|EFD01851.1| lysine--tRNA ligase [Propionibacterium acnes SK187]
          Length = 1081

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 102/563 (18%), Positives = 178/563 (31%), Gaps = 120/563 (21%)

Query: 7    HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626  HRLGDVAVELTGQEMTVSGRVDAYRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67   SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686  HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127  KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
            + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740  RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185  RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   Y L  AP+ Y + LM  G          F                        
Sbjct: 800  NAYDLDLY-LRIAPELYLKRLMVGGA------GRVF------------------------ 828

Query: 245  EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                           +   F N    + +       +A + YG         + M ++T 
Sbjct: 829  --------------EIGRNFRNEGADATHNPEFTMLEAYQAYGDY-------VQMRHLTR 867

Query: 305  HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                    + S   +   G  V     KG        D  NE           +    ++
Sbjct: 868  EM------ILSAARNATGGTVVRGRDRKGVEH---EIDLANE-----------WHVITVN 907

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            E         +++ L    T        +   +                 +   H+++ +
Sbjct: 908  EG--------ISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSEHV 959

Query: 425  GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                    E  +  DFP               +P T        L         A ++DL
Sbjct: 960  ------TVEPTFFCDFP------------TDVSPLTRQHRDDPRL---------AEKWDL 992

Query: 485  VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +  G E+ +         +  + F+   +                  A +  MPP GG+ 
Sbjct: 993  IIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMG 1052

Query: 541  AGIDRIVMLLLGAKNVREVSLFP 563
             G+DR+VM+L  A ++RE   FP
Sbjct: 1053 MGLDRLVMMLTNA-SIRETISFP 1074


>gi|218782114|ref|YP_002433432.1| asparaginyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218763498|gb|ACL05964.1| Asparaginyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 464

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 81/409 (19%), Positives = 145/409 (35%), Gaps = 52/409 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           R+     L  S     V + GWV  VR   G  FL+I D   +   QV+A      +E A
Sbjct: 13  RSRVAALLNASGPLENVLVKGWVRTVRDQKGFAFLEINDGSCLKNLQVIAEGGEGPYETA 72

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+ +   + + G + +   +  +  +  G+I L                P+  +R   E
Sbjct: 73  VSLTTGCSVQVSGRLAASPGKGQDWELKAGEILLIGDC--------PESFPLQKKRHSDE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R     L  R +        R+ +  ++        F+   TPI+T S  EGA +   
Sbjct: 125 FLR-TIAHLRPRTNKFGALFRIRSSMALAVHNFFADRGFVYIQTPIITGSDCEGAGEMFT 183

Query: 183 PSRVNQG-------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
            +   +G        F+   A      Q +  + A      +   P FR E+  + R   
Sbjct: 184 LTTQAKGETLAPEKDFFGKPAYLTVSGQLEAEMYALALGAVYTFGPTFRAENSNTSRHAA 243

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRG--------------VFEEFSN-------GNTVS 271
           EF+ ++ E +F + +D +   E ++R               +F  F +        N ++
Sbjct: 244 EFWMIEPEAAFADLNDNMALGEELVRHLASHALEKCSQDVDLFARFVDKTLSQTLDNIIN 303

Query: 272 NNFLRICYDDAIRRYGTDKPDLRN-PIIMHN--------VTEHFVHSEFRVFSKILSVNP 322
           N+F+R+ Y +A+          +  P+   +        +TE +      V+    S+ P
Sbjct: 304 NDFVRMTYTEAVEALQKSDRKFQYQPMWGKDLQTEHERYITEEYCKKPVIVYDYPASIKP 363

Query: 323 GYEVWAIPAKGGGGNRAFCDRMNEWA-RSQGQPGLAYIFWRLDESGNVA 370
            Y       K          R+ E    SQ +  L  +  R+ E G   
Sbjct: 364 FYMRMNPDGKTVAAMDVLVPRIGEIIGGSQREERLDMLQARIKEMGLSE 412



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 12/116 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
               +  PF M          N      A    LV    EI  G  R    +++      
Sbjct: 356 DYPASIKPFYMRM--------NPDGKTVAAMDVLVPRIGEIIGGSQREERLDMLQARIKE 407

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +G+S    E  +     + + G  PH G   G +R++M++ G  N+R+V  FP + 
Sbjct: 408 MGLS----EEEYWWYLDSRRFGTAPHSGFGMGFERVLMMVTGVSNIRDVIPFPRTP 459


>gi|314963762|gb|EFT07862.1| lysyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
          Length = 1081

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 102/563 (18%), Positives = 178/563 (31%), Gaps = 120/563 (21%)

Query: 7    HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626  HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67   SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686  HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127  KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
            + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740  RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185  RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   Y L  AP+ Y + LM  G          F                        
Sbjct: 800  NAYDLDLY-LRIAPELYLKRLMVGGA------GRVF------------------------ 828

Query: 245  EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                           +   F N    + +       +A + YG         + M ++T 
Sbjct: 829  --------------EIGRNFRNEGADATHNPEFTMLEAYQAYGDY-------VQMRHLTR 867

Query: 305  HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                    + S   +   G  V     KG        D  NE           +    ++
Sbjct: 868  EM------ILSAARNATGGTVVRGRDRKGVEH---EIDLANE-----------WHVITVN 907

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            E         +++ L    T        +   +                 +   H+++ +
Sbjct: 908  EG--------ISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSEHV 959

Query: 425  GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                    E  +  DFP               +P T        L         A ++DL
Sbjct: 960  ------TVEPTFFCDFP------------TDVSPLTRQHRDDPRL---------AEKWDL 992

Query: 485  VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +  G E+ +         +  + F+   +                  A +  MPP GG+ 
Sbjct: 993  IIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMG 1052

Query: 541  AGIDRIVMLLLGAKNVREVSLFP 563
             G+DR+VM+L  A ++RE   FP
Sbjct: 1053 MGLDRLVMMLTNA-SIRETISFP 1074


>gi|262172259|ref|ZP_06039937.1| lysyl-tRNA synthetase (class II) [Vibrio mimicus MB-451]
 gi|261893335|gb|EEY39321.1| lysyl-tRNA synthetase (class II) [Vibrio mimicus MB-451]
          Length = 510

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 65/292 (22%), Positives = 132/292 (45%), Gaps = 25/292 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G V   R      FL I++  G  Q  A+      E+ + ++ ++    
Sbjct: 66  LEALNHVVSIAGRVMAKRGP----FLVIQETSGRIQAYASK-----EVQQELKDKYQGLD 116

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++        +    G + ++ ++ ++L+ A   PLP        + +R++ R++DL
Sbjct: 117 IGDIIGVQGALHKSG--KGDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 173

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  V R+++++++R  MI++ F+E  TP++        AR F+          
Sbjct: 174 IVNENSRNAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPM 233

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++
Sbjct: 234 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMD 291

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
             E +L  V  E     ++            + R+   DAI+ Y  +   ++
Sbjct: 292 LTEELLSSVALEVLGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQ 343



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 386 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 445

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP 
Sbjct: 446 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFPA 505

Query: 565 SQ 566
            +
Sbjct: 506 MR 507


>gi|145219506|ref|YP_001130215.1| lysyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|145205670|gb|ABP36713.1| lysyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 502

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 65/311 (20%), Positives = 125/311 (40%), Gaps = 29/311 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            +  + V ++G +  +R  G   F  I+D  G  QV    D    E+ ++  + + L   
Sbjct: 52  EEAKTPVSVAGRIMAIRKMGKASFFHIQDAKGRIQVYLKKD----EVGETSYNTFKLLDI 107

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----------YPESI 124
           G +      T      TG+I + A+   +LS +         +                +
Sbjct: 108 GDIAGVKGYTF--KTRTGEISVHAEDFTLLSKSLRPIPVAKEKEVEGEKVVFDAFSDREL 165

Query: 125 RFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLV 182
           R++ R++DL     + +  +KR+ I++ MR    A+ ++E  TPIL        AR F  
Sbjct: 166 RYRQRYVDLIVNPEVRETFIKRSAIVSHMRSFFTAKGWLEVETPILQPIYGGAAARPFTT 225

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y L  A + Y + L+  GF+  F+ A  FR+E       P EF Q+++ ++
Sbjct: 226 HHNALDMELY-LRIANELYLKRLIVGGFEGVFEFAKDFRNEGIDRFHNP-EFTQVELYVA 283

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDKPDL 293
           + + + ++  +E +        +  +T S           F RI   D+I+ Y     + 
Sbjct: 284 YKDYNWMMELVEQLFHQTALAVNGSDTTSFLGNEISLKPPFRRITIADSIKEYTGADIEG 343

Query: 294 RNPIIMHNVTE 304
           ++   + N  +
Sbjct: 344 KSEQELRNTAK 354



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 6/150 (4%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++LG+          I+D  F E+ E   K+         P       K +        
Sbjct: 353 AKDLGLELDPKIGPGKIIDEIFGEFVE--PKLIQPTFITDYPTEMSPLAKPHREKEGLVE 410

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPH 536
           +++L+  G EI +     +   V  Q        ++  ++          RA + GMPP 
Sbjct: 411 RFELIAGGKEICNSFSELNDPVVQRQRLEEQAGLRQRGDDEAMIVDEDFLRALEYGMPPT 470

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+  G+DR+VMLL G  ++R+V  FP  +
Sbjct: 471 AGLGIGVDRLVMLLTGEDSIRDVIFFPHMK 500


>gi|258620334|ref|ZP_05715372.1| lysyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258587213|gb|EEW11924.1| lysyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 512

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 65/292 (22%), Positives = 132/292 (45%), Gaps = 25/292 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G V   R      FL I++  G  Q  A+      E+ + ++ ++    
Sbjct: 68  LEALNHVVSIAGRVMAKRGP----FLVIQETSGRIQAYASK-----EVQQELKDKYQGLD 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++        +    G + ++ ++ ++L+ A   PLP        + +R++ R++DL
Sbjct: 119 IGDIIGVQGALHKSG--KGDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 175

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  V R+++++++R  MI++ F+E  TP++        AR F+          
Sbjct: 176 IVNENSRNAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPM 235

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++
Sbjct: 236 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMD 293

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
             E +L  V  E     ++            + R+   DAI+ Y  +   ++
Sbjct: 294 LTEELLSSVALEVLGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQ 345



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 388 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 447

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP 
Sbjct: 448 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFPA 507

Query: 565 SQ 566
            +
Sbjct: 508 MR 509


>gi|226355353|ref|YP_002785093.1| lysyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226317343|gb|ACO45339.1| putative lysine--tRNA ligase (lysyl-tRNA synthetase) [Deinococcus
           deserti VCD115]
          Length = 514

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 62/302 (20%), Positives = 117/302 (38%), Gaps = 30/302 (9%)

Query: 2   HRY---RTHSCGDLGVSDV---------GSFV-----RLSGWVHRVRPHGGIIFLDIRDH 44
           H Y   RTH   D+  +           G         L+G V  +R  G   F D++D 
Sbjct: 37  HPYTYARTHHARDVLAAHPANAEGVREPGQEWPETEYSLAGRVTLMRHMGKAAFADLQDE 96

Query: 45  YGITQVVANP-DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEI 103
           +G  Q+  +  D+  F+  K +    ++ + G               TGQ+ L     + 
Sbjct: 97  HGSLQLHFSRQDTENFDPTKKIDLGDIIGVRG---------FPFVTKTGQLTLRVTSWQP 147

Query: 104 LSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFI 162
           L  +   P+P        E +R + R+LDL  +   +   + R+R I  +R  + +  F+
Sbjct: 148 LVKSL-HPMPSKFHGLQDEELRARRRYLDLMINPERREAFRTRSRAIRYIRNFLDSREFM 206

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
           E   P L   +                  ++L  + + Y + L+  GF+R ++I   +R+
Sbjct: 207 EVEGPTLQVVAGGTEAKPFTTHHNALSHDFSLRISLELYLKRLLVGGFERVYEIGRNYRN 266

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           E       P EF  L+   ++ + +D++  +E +L G+  E      +S     + +   
Sbjct: 267 EGIDRTHNP-EFTMLEAYFAYGDYNDMMQLVEEMLHGLVTEVKGEPKLSYQGQTVDFSLP 325

Query: 283 IR 284
            R
Sbjct: 326 FR 327



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 4/93 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQ 530
               A + DL   GFE+A      + +      F      ++        +      A +
Sbjct: 406 REALAERADLFVAGFELAPIYSELNDALDQRARFEAQTQRRDAGDDEAHEQDEDFLLALE 465

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP  G+  G+DR+ MLL  + ++R+V LFP
Sbjct: 466 YGMPPAAGMGMGMDRLAMLLTDSDSIRDVLLFP 498


>gi|289178212|gb|ADC85458.1| Lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 605

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 104/568 (18%), Positives = 189/568 (33%), Gaps = 129/568 (22%)

Query: 5   RTHSCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANPDSACFEI 61
           R    G L   ++    V ++G V  +R  GG+ F+ +   D   I  +++         
Sbjct: 151 RVKYDGKLEAGAETDDIVGVAGRVLFIRNAGGLCFVQLAAGDGTTIQAMLSKKQIG---- 206

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S++    L   G  +      I +   TG++ + A +  I + A +    +   +E  
Sbjct: 207 ADSLKQFKQLVDLGDHLFVKGRVIASK--TGELSIFADEWAIAAKALQPLPTL--HKELN 262

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           E  R +  ++ +  D   +N+V+ R+R + S+R       F+E  TP+L T      AR 
Sbjct: 263 EDTRTRKPYIGMIADEKIRNMVRNRSRAVASLRRTFDEHGFLEVETPMLQTIHGGAAARP 322

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           Y L  AP+ + +  +  G ++ F+I   FR+E   +   P EF  ++ 
Sbjct: 323 FTTHMNAFDLDLY-LRIAPELFLKRCLVGGIEKVFEINRDFRNEGVDATHAP-EFTMVEA 380

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
                                 E + N +T++     +    AI  +G         + +
Sbjct: 381 Y---------------------EAYGNYDTIAKLVKELIQKTAIDVFG------STKVTL 413

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            + TE+    E+                                 +  + + GQ      
Sbjct: 414 LDGTEYDFGGEW---------------------------KTMSMYDSLSEALGQQ----- 441

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                          +    ++    AI  RL ++             +  +       H
Sbjct: 442 ---------------ITPETSVEELGAIADRLGVE-----------RDEVENH-GKLVEH 474

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +         +E  ++ DFP      E   +  AH                       
Sbjct: 475 LWEHF--YEDKLYEPTFVRDFPV-----ETSPLVKAHR----------------SKPGVV 511

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPP 535
            ++DL   GFE+A+G    +   V  + F          +            A   GMPP
Sbjct: 512 EKWDLYVRGFELATGYSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPP 571

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG+  GIDR+++ L GA  +RE   FP
Sbjct: 572 AGGMGMGIDRLLIALTGA-TIRETITFP 598


>gi|295425663|ref|ZP_06818350.1| lysine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295064679|gb|EFG55600.1| lysine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 516

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 69/383 (18%), Positives = 134/383 (34%), Gaps = 30/383 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L         +++G +   R  G + F D+ D  G  Q+    D    + 
Sbjct: 44  EKYSKEDKDELNEDMP--KTKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDN 101

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  +   +    G  +    E +     TG++ + A  +  LS A   PLP        
Sbjct: 102 YKIFKKSDI----GDFLGIDGEVM--KTDTGELTIRALHVTFLSKALR-PLPDKYHGLKD 154

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
               ++ R+LDL  +         RT+II ++R  +   +F+E  TP+L        AR 
Sbjct: 155 VEQIYRQRYLDLITNRESYMRFVHRTQIIQAIRDYLNKRDFLEVETPVLHNIPGGAEARP 214

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  A +   + L+    +R ++I   FR+E   +   P EF +L+ 
Sbjct: 215 FITHHNALDIDLY-MRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELES 272

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  D+++  E ++R   +                 D  I   G D  DL  P   
Sbjct: 273 YAAYWDFHDVMDEAEGIIRAAAKVV-------------SPDGKITYQGQD-IDLGKPFRR 318

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++ +         F K ++     ++                 +N +     +  +   
Sbjct: 319 VHMVDLIKEKTGVDFWKPMTDEEAKKIAEDHDIHCESYWKVGHIINAFFEKYCEKTIVDP 378

Query: 360 FWRLDESGNVAGMGPVAKHLNIV 382
            +     G+   + P+AK     
Sbjct: 379 TFVY---GHPVEISPLAKKTADD 398



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 60/365 (16%), Positives = 118/365 (32%), Gaps = 28/365 (7%)

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVL-RGVFEEF-----SNGNTVSNNFLRICYDDA 282
           R        +  M FV +  I+  + + L +  F E       N    +     I + +A
Sbjct: 162 RYLDLITNRESYMRFVHRTQIIQAIRDYLNKRDFLEVETPVLHNIPGGAEARPFITHHNA 221

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +      +  L  P+    V +     E     +   ++  +       +       F D
Sbjct: 222 LDIDLYMRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNPEFTELESYAAYWDFHD 281

Query: 343 RMNEWARSQGQPGLAYIFWRLDE-SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
            M+E        G+     ++    G +   G             +   +  + G   + 
Sbjct: 282 VMDE------AEGIIRAAAKVVSPDGKITYQGQDIDLGKPFRRVHMVDLIKEKTGVDFWK 335

Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
              D              IA++  I   + ++   I++  F+E   E+  +D        
Sbjct: 336 PMTDEEA---------KKIAEDHDIHCESYWKVGHIINA-FFEKYCEKTIVDPTFVYGHP 385

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
            +    + K  D       ++++   G E  +     +  +     F      ++   + 
Sbjct: 386 VEISPLAKKTAD-DPRFTDRFEIYIMGEEYGNAFSELNDPDDQRARFEAQMAERDAGNDE 444

Query: 522 FG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
                    RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP  +      + +  
Sbjct: 445 ADMIDEDYLRAMEFGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMRPEAVPSIDAEV 504

Query: 578 TVSVE 582
              +E
Sbjct: 505 KADME 509


>gi|323343343|ref|ZP_08083570.1| asparagine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323095162|gb|EFZ37736.1| asparagine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 464

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 58/292 (19%), Positives = 114/292 (39%), Gaps = 28/292 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--E 60
             RT     L  +D G+ V + GWV   R    + F+ + D   I  V    D + F  E
Sbjct: 1   MKRTKIVDVLRSTDFGNNVNVKGWVRTHRSSKAVDFIALNDGSTIKNVQIVVDPSKFDAE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K++ +   L + G ++    +          +E+  + +EI         P+  + + 
Sbjct: 61  TLKNITTGSCLNVVGELVESQGKGQT-------VEIQCKTLEIYGPCGSDY-PMQKKGQT 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R ++  + LR +T       R  +  ++        F    TPI+TAS  EGA + 
Sbjct: 113 FEYMR-QHAHMRLRTNTFGAVFRIRHNMAIAIHRYFHEHGFFYFHTPIITASDAEGAGEM 171

Query: 181 LVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDE 223
              +  N                 F+    +     Q +  L A+   + +   P FR E
Sbjct: 172 FQVTTKNLYDLKKDENGKIIYDDDFFGKMTSLTVSGQLEGELGATALGQIYTFGPTFRAE 231

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +  + R   EF+ ++ E++F++ +D+++  E+ ++   +   +       FL
Sbjct: 232 NSNTPRHLAEFWMIEPEVAFIDLNDLMDLEEDFIKYCVKWALDNCKDDLEFL 283



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 26/150 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAF 480
            E  ++  +  +   + D+P        K I      F M      ++++G D+      
Sbjct: 339 HERYLVEEHFKKPVIMTDYP--------KDIKA----FYMKMNEDGKTVQGTDV------ 380

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
              L     EI  G +R    + +L       I  + +           + G  PHGG  
Sbjct: 381 ---LFPQIGEIIGGSVREEDYDKLLGEIKRRDIPMKDMW----WYLETRKYGTCPHGGFG 433

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R+++ + G +N+R+V  FP +    D
Sbjct: 434 LGFERLILFVTGMQNIRDVIPFPRTPKSAD 463


>gi|212550927|ref|YP_002309244.1| asparaginyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|259511566|sp|B6YRL1|SYN_AZOPC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|212549165|dbj|BAG83833.1| asparaginyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 464

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 62/305 (20%), Positives = 118/305 (38%), Gaps = 27/305 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC 58
           M   R      L   D    V + GWV   R +  I F+++ D   +   Q+V N     
Sbjct: 1   MKMKRARIVDLLSTPDFNRKVCVKGWVRTRRGNKNISFIELNDGSTVHGIQIVVNVVKLG 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            +  KS+ +   + I+GL++    E         ++E+ A +IEI  +A+    P+  + 
Sbjct: 61  EDSLKSITTGACIAINGLLVKSKGEG-------QKVEIQADEIEIYGIADPSVYPLQKKW 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R +  +L  R +T    +  R  +  ++      + F    TPI+T+S  EGA 
Sbjct: 114 HSLEFLR-EIAYLRPRTNTFGCILRIRHHLAYAIHKYFNKQGFFYFHTPIITSSDAEGAG 172

Query: 179 DFLVPSRVN--------------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFR 221
                + ++                 F+          Q +  L A      +   P FR
Sbjct: 173 SMFQITDLDIANCPKTKDGEVDYTRDFFGCSTNLTVSGQLEGELGALALGGIYTFGPIFR 232

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
            E   + R   EF+ ++ E++F + +D ++  E+ L+ +             FL   Y++
Sbjct: 233 AEKSNTPRHLAEFWMIEPEIAFYDINDNMDLAEDFLKYIISYAMKYCKDDIEFLNNTYNN 292

Query: 282 AIRRY 286
            +  +
Sbjct: 293 ELIEH 297



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L     EI  G  R    + +L+    + +S     +         + G  PH G   G 
Sbjct: 381 LFPRIGEIIGGSERESDHQKLLKRIKELNMSM----DNLWWYLDTRRFGTAPHSGFGLGF 436

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V+ + G +N+R+V  FP +  
Sbjct: 437 ERLVLFVTGMQNIRDVIPFPRTPK 460


>gi|121605941|ref|YP_983270.1| lysyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120594910|gb|ABM38349.1| lysyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 521

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 60/298 (20%), Positives = 124/298 (41%), Gaps = 25/298 (8%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHY-----GITQVVANPDSACFEIAKSVRSEWVLCID 74
            V ++G +   R  G   F  ++D       G  Q+  N      E+  + +   +  I 
Sbjct: 77  KVSVAGRMMLKRVMGKASFATLQDASFGPTGGRIQLYINNAGVGEEVHAAFKHWDLGDI- 135

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
                 +A  +     TG++ + A  I +++ +   PLP        + ++++ R++DL 
Sbjct: 136 -----VAATGLLFRTKTGELSIHADSIRLVTKSLR-PLPDKFHGMADQEVKYRQRYVDLI 189

Query: 135 RDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            D   +   + R++ ++ +R  M+A +F+E  TP+L        A+ F           Y
Sbjct: 190 MDEAARKRFMARSKAVSGIREFMVANDFLEVETPMLHPIPGGANAKPFKTHHNALDQEMY 249

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  GF+R F+I   +R+E   S R   EF  ++   ++    D++  
Sbjct: 250 -LRIAPELYLKRLIVGGFERVFEINRSYRNEGI-SVRHNPEFTMMEFYAAWWNYTDLMTF 307

Query: 253 MENVLRGVFEEFSN---------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
            E ++R   ++               +S  F R+   +AI ++      + + + + N
Sbjct: 308 TEALIRDAAQKVCGSLQLSYAGKPVDLSQPFERLTIREAILKHTEAGEQVDDAVWLTN 365



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           ++E   EEK        F M      S     ND       +++L   G E  +G    +
Sbjct: 391 YFEELVEEKLWQPT---FIMEHPTEISPLARANDERPEVTERFELYITGREFGNGFSELN 447

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            +E     F+    +K+  ++          RA + GMPP GG   GIDR++MLL  + +
Sbjct: 448 DAEEQAVRFNAQVHAKDSGDDEAMFYDHDFIRALEYGMPPTGGCGVGIDRLMMLLTDSPS 507

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 508 IRDVILFP 515


>gi|330447414|ref|ZP_08311063.1| lysyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491605|dbj|GAA05560.1| lysyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 502

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 65/303 (21%), Positives = 138/303 (45%), Gaps = 27/303 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   +  +L   + G    ++G +   R      FL I+D  G  Q  A+ D     + 
Sbjct: 47  KYGEMTKEEL--EEAGHVFAIAGRIMAKRGP----FLAIQDVSGRIQAYASKD-----VQ 95

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K ++ ++     G ++        +    G + ++  + E+L+ A   PLP        +
Sbjct: 96  KELKEKYSGLDIGDIIGIKGALHKSG--KGDLYVNMDEYELLTKALR-PLPEKFHGLTDQ 152

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
            +R++ R++DL  +   ++  V R+++++++R  M+++ F+E  TP++        AR F
Sbjct: 153 EMRYRQRYVDLIVNDDSRHAFVVRSKVVSAIRNFMVSKGFMEVETPMMHVIPGGATARPF 212

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++  
Sbjct: 213 ITHHNALDIDMY-LRVAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNPEFTMMEFY 270

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKP 291
           M++ + +D+++  E +L  +  +    + +            + R+   DAI++Y  D  
Sbjct: 271 MAYADYNDLMDLTEEMLSSIAMDVLGSSKMPYGEYEVEFAGPYARMSMLDAIKKYNPDHA 330

Query: 292 DLR 294
           +++
Sbjct: 331 EIQ 333



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 6/114 (5%)

Query: 459 FTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F        S     ND       +++    G E+A+G    + ++   Q F     +K+
Sbjct: 384 FITEYPADISPLARRNDENPFITDRFEFFIGGREVANGFSELNDAQDQDQRFKAQVDAKD 443

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             ++           A + G+PP  G   GIDR+VMLL     +R+V LFP  +
Sbjct: 444 AGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFPAMR 497


>gi|15805401|ref|NP_294095.1| lysyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|11387155|sp|Q9RXE1|SYK_DEIRA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|6458049|gb|AAF09951.1|AE001897_4 lysyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 525

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 75/362 (20%), Positives = 133/362 (36%), Gaps = 41/362 (11%)

Query: 2   HRYRTHSCGDLGVSDVGSFV-----RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-D 55
           H  R    G+ G  + G         L+G V  +R  G   F D+ D  G  Q+  +  D
Sbjct: 52  HPAREEGTGEGGTLEPGQKWEEESYSLAGRVTLMRHMGKAAFADLSDEDGKIQLFFSKQD 111

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +A F+  K +    ++ + G               TGQ+ L   + + L  +   PLP  
Sbjct: 112 TAGFDATKKIDLGDIIGVKG---------HPFVTKTGQLTLHVTEWQPLVKSL-HPLPSK 161

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                 E +R + R++DL   +   +    R+R+I  +R  +    F+E   P L  ++ 
Sbjct: 162 FHGLQDEELRARRRYVDLMVTEGAREKFQARSRMIRYIRNELDERGFMEVEGPTLQVTAG 221

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+         F  L  + + Y + L+  GF+R ++I   +R+E       P E
Sbjct: 222 GAEARPFMTHHNALSYDF-KLRISLELYLKRLLVGGFERVYEIGRVYRNEGIDRTHNP-E 279

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  L++  ++ +  DI   +E++L G+ +E                      Y     D 
Sbjct: 280 FTMLELYWAYADYSDIAKLVEDLLSGLAKEVHGSYQFE--------------YQGKTLDF 325

Query: 294 RNPIIMHN----VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN-EWA 348
             P    +    + EH    +F      L     +     P   G  +    D++  E+ 
Sbjct: 326 TPPFARVDYLGGLREHVPGLDFDPLD--LDRLRAFCDERFPQWKGVPSYKLLDKLFGEFV 383

Query: 349 RS 350
             
Sbjct: 384 EP 385



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 7/112 (6%)

Query: 459 FTMPQGGMESLKGNDLLS---IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           F M    + S       S       ++++ C+GFE+A+     + +    + F      +
Sbjct: 392 FVMDHPAVISPLAKKHRSRPEAVTERFEVFCSGFELANAFSELNDAFDQRERFEAQTARQ 451

Query: 516 ----EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +    +      A + GMPP GG+  GIDR+ MLL  + ++R+V LFP
Sbjct: 452 AAGDDEAHPQDEDFLLALEYGMPPAGGLGIGIDRLAMLLTDSDSIRDVLLFP 503


>gi|269959606|ref|ZP_06173987.1| lysyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269835664|gb|EEZ89742.1| lysyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 510

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 64/285 (22%), Positives = 128/285 (44%), Gaps = 25/285 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R      FL I++  G  Q  A+       + K ++ ++     G ++  
Sbjct: 73  VAIAGRIMAKRGP----FLVIQETSGRIQAYADK-----AVQKVLKDQYQGLDIGDIIGV 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                 +    G + ++ ++ E+L+ A   PLP        + +R++ R++DL  +   +
Sbjct: 124 KGALHKSG--KGDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSR 180

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
              V R+++++++R  MI++ F+E  TP++        AR F+          Y L  AP
Sbjct: 181 QAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMY-LRIAP 239

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L 
Sbjct: 240 ELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMDLTEELLS 298

Query: 259 GVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
            V  E     ++            + R+   +AI+ Y  D   ++
Sbjct: 299 SVALEVLGSTSMPYGEDTVEFGGTYTRMSMFEAIKHYNPDHAQIQ 343



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 386 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 445

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 446 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504


>gi|262401637|ref|ZP_06078203.1| lysyl-tRNA synthetase (class II) [Vibrio sp. RC586]
 gi|262352054|gb|EEZ01184.1| lysyl-tRNA synthetase (class II) [Vibrio sp. RC586]
          Length = 510

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 65/292 (22%), Positives = 132/292 (45%), Gaps = 25/292 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G V   R      FL I++  G  Q  A+      E+ + ++ ++    
Sbjct: 66  LEALNHVVSIAGRVMAKRGP----FLVIQETSGRIQAYASK-----EVQQELKEKYQGLD 116

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++        +    G + ++ ++ ++L+ A   PLP        + +R++ R++DL
Sbjct: 117 IGDIIGVQGALHKSG--KGDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 173

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  V R+++++++R  MI++ F+E  TP++        AR F+          
Sbjct: 174 IVNENSRNAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPM 233

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++
Sbjct: 234 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMD 291

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
             E +L  V  E     ++            + R+   DAI+ Y  +   ++
Sbjct: 292 LTEELLSSVALEVLGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQ 343



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 386 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 445

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 446 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504


>gi|269103438|ref|ZP_06156135.1| lysyl-tRNA synthetase (class II) [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163336|gb|EEZ41832.1| lysyl-tRNA synthetase (class II) [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 500

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 64/292 (21%), Positives = 130/292 (44%), Gaps = 25/292 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +    V ++G +   R      FL I+D  G  Q  A+ D     + K ++ ++    
Sbjct: 56  LEEAKQVVAIAGRIMAKRGP----FLAIQDVTGRIQAYASKD-----VQKELKDKYSGLD 106

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    E   +    G + ++  + E+L+ A   PLP        + +R++ R++DL
Sbjct: 107 IGDIIGIKGELHKSG--KGDLYVNMDQYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 163

Query: 134 RRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +     R+++++++R  M+ + F+E  TP++        AR F+          
Sbjct: 164 IVNDDSRKAFKIRSQVVSAIRSFMVTKGFMEVETPMMHVIPGGATARPFITHHNALDIDM 223

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++  M++ +  D+++
Sbjct: 224 Y-LRVAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYRDLMD 281

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
             E +L  +  E    + +            + R+   DAI+ Y  D  +++
Sbjct: 282 LTEEMLSSIAIEVLGSSKMPYGDFEVEFAGPYTRMSMLDAIKHYNPDHAEIQ 333



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 6/114 (5%)

Query: 459 FTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F        S     ND       +++    G E+A+G    + ++   Q F     +K+
Sbjct: 384 FITEYPADISPLARRNDENPFITDRFEFFIGGREVANGFSELNDAQDQDQRFKAQVDAKD 443

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             ++           A + G+PP  G   GIDR+VML      +R+V LFP  +
Sbjct: 444 AGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFPAMR 497


>gi|262163921|ref|ZP_06031660.1| lysyl-tRNA synthetase (class II) [Vibrio mimicus VM223]
 gi|262027449|gb|EEY46115.1| lysyl-tRNA synthetase (class II) [Vibrio mimicus VM223]
          Length = 510

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 65/292 (22%), Positives = 132/292 (45%), Gaps = 25/292 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G V   R      FL I++  G  Q  A+      E+ + ++ ++    
Sbjct: 66  LEALNHVVSIAGRVMAKRGP----FLVIQETSGRIQAYASK-----EVQQELKDKYQGLD 116

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++        +    G + ++ ++ ++L+ A   PLP        + +R++ R++DL
Sbjct: 117 IGDIIGVQGALHKSG--KGDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 173

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  V R+++++++R  MI++ F+E  TP++        AR F+          
Sbjct: 174 IVNENSRNAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPM 233

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++
Sbjct: 234 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMD 291

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
             E +L  V  E     ++            + R+   DAI+ Y  +   ++
Sbjct: 292 LTEELLSSVALEVLGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQ 343



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 386 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 445

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 446 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504


>gi|310779798|ref|YP_003968130.1| asparaginyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309749121|gb|ADO83782.1| asparaginyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 463

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 73/390 (18%), Positives = 131/390 (33%), Gaps = 56/390 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
             S +G  V +SGWV ++R      F++I D       QVV   +   FE    V     
Sbjct: 13  SESFIGKEVVISGWVKKIRSQKKFGFIEINDGSFFKGIQVVFESELDNFEEISKVSISST 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L I G ++    +  +       IE+ A ++EI   A+ L  P+  +R   E +R     
Sbjct: 73  LVIKGKLVESQGKGQS-------IEILASEVEIFQKAD-LDFPLQNKRHSFEFLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++       +F+   TPI+T +  EGA +    + ++   
Sbjct: 124 LRPRTNTFSAVFRVRSVLAYAIHKFFQENDFVYVHTPIITGADCEGAGEMFRVTTLDLDN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       + F   +   P FR E+  + R   E
Sbjct: 184 VPKTEEGSIDEAKDFFGKETNLTVSGQLNVETYCAAFRNVYTFGPTFRAENSNTSRHASE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +    +   E +++ V +   +       F                   
Sbjct: 244 FWMIEPEVAFGDLGVNMELAEAMVKYVIKYVMDECPEEMEFFNSFIEKGLFEKLNNVLNN 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+   +   +EH  +     F K + V    +     
Sbjct: 304 DFGRVTYTEAIEILENCGKKFDFPVEWGIDLQSEHERYLAEEHFKKPIFVTDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                  +   D     A     PG+  I 
Sbjct: 361 --KAFYMKMNEDDKTVRAMDLLAPGIGEII 388



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 26/150 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P        K I      F M           D  +++A  
Sbjct: 338 HERYLAEEHFKKPIFVTDYP--------KDIKA----FYMKMNE-------DDKTVRAM- 377

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  EI  G  R     ++ +    + ++K      +       + G  PH G  
Sbjct: 378 -DLLAPGIGEIIGGSQREDDLPLLEKRMEEMNLNK----EDYTFYTDLRRYGSFPHSGFG 432

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R++M + G  N+R+V  FP +    +
Sbjct: 433 LGFERMMMYITGMTNIRDVIPFPRTPKSAE 462


>gi|168703151|ref|ZP_02735428.1| asparaginyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 494

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 67/282 (23%), Positives = 110/282 (39%), Gaps = 28/282 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHY--GITQVVANPDSACFE-IAKSVRSE 68
               VG  VRL GWV   R   GG  F+++ D    G  QVVA  + A +E + K + + 
Sbjct: 40  RAEAVGRHVRLQGWVRTRRDSKGGFSFIELNDGSCQGNVQVVAPGELANYESVVKHLHTG 99

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + IDG V +  A+           E+ A  +E++  A+    P+  +    E +R   
Sbjct: 100 ASVRIDGEVKASPAKGQAT-------EVLAASVELIGDADVNTYPLQKKGHSFEFLRG-I 151

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +TL      R ++  S+        F    TP++TAS  EGA      S ++ 
Sbjct: 152 AHLRPRTNTLGAVARVRHQVSISIHQFFHERGFYYVHTPVITASDCEGAGAMFRVSTIDP 211

Query: 189 G-------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                          F+   A      Q +    A    + +   P FR E+  + R   
Sbjct: 212 EAPPKAEGKVDYKQDFFGKPAYLTVSGQLQGEAFACALGKIYTFGPTFRAENSNTPRHLA 271

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           EF+ ++ EM+F +  D ++  E  L+ +  +          F
Sbjct: 272 EFWMIEPEMAFYDLTDNMDLAEAFLKRIISDAMTYCLEDLKF 313



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 43/117 (36%), Gaps = 14/117 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                  PF M           D  +++A   D++  G  EI  G  R    +V+     
Sbjct: 386 DYPRTLKPFYMKVND-------DGKTVRAM--DVLVPGVGEIIGGSQREERLDVLESRMR 436

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             G+        +       + G  PH G   G++R ++ L G  N+R+V  FP + 
Sbjct: 437 EQGLPP----EGYEWYLDLRRYGTVPHSGFGLGLERTILFLSGMANIRDVIPFPRTP 489


>gi|149730553|ref|XP_001490073.1| PREDICTED: similar to Aspartyl-tRNA synthetase, cytoplasmic
           (Aspartate--tRNA ligase) (AspRS) (Cell
           proliferation-inducing gene 40 protein) [Equus caballus]
          Length = 501

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 88/378 (23%), Positives = 149/378 (39%), Gaps = 47/378 (12%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVRS 67
           L V      V +   VH  R  G   FL +R        +  V  +      + A ++  
Sbjct: 51  LTVKKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANINK 110

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE----- 122
           E ++ ++G+V  R       +     +EL  QKI ++S+AE        +   PE     
Sbjct: 111 ESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEVEGEE 168

Query: 123 --------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                     R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++ 
Sbjct: 169 EGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAAS 228

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   EF
Sbjct: 229 EGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEF 286

Query: 235 YQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------LRI 277
             LD+EM+F        ++I +T+  + +G+ E F       N       F      LR+
Sbjct: 287 VGLDIEMAFSYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLRL 346

Query: 278 CYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVWA 328
            Y +A+           D+ DL  P    +  + +    ++F +  K  L+V P Y +  
Sbjct: 347 EYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFYTMPD 406

Query: 329 IPAKGGGGNRAFCDRMNE 346
                   +     R  E
Sbjct: 407 PRNPKQSNSYDMFMRGEE 424



 Score =  100 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 345 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYD----TDFYILD------KY 394

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 395 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 445

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 446 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501


>gi|13541827|ref|NP_111515.1| asparaginyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|20139905|sp|Q979Y4|SYN_THEVO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|14325264|dbj|BAB60168.1| tRNA synthetase Asn [Thermoplasma volcanium GSS1]
          Length = 429

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 109/259 (42%), Gaps = 11/259 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             + VGS V + GWV+R+R  GG+ F+ IRD  GI Q  A  +    E    +     L 
Sbjct: 9   SEAHVGSEVSVRGWVYRIRSSGGVTFIVIRDSTGIVQCTAKKNELTPEQYDEI---SSLG 65

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I+  +             TG  E+S  K  +    +  P+     ++  E      R L 
Sbjct: 66  IESSLSLIGTMKKEPRSPTG-YEISIHKFTVYQKNDVFPIT----KDQGEEFLLDNRHLW 120

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       +  R+ I  S       + + +  TP + +++ EG           +  F 
Sbjct: 121 LRSREFTSILKVRSTIFRSFADFFYDQGYYQVHTPFMVSTAVEGGSTLFKVDFFGEPIF- 179

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y + ++ S  ++ F IAP FR E  R+ R   E++  + E+++++  ++++ 
Sbjct: 180 -LNQSAQFYLETMIYS-LEKVFTIAPSFRAEKSRTRRHLTEYWHAEAEVAWIDNREMMDV 237

Query: 253 MENVLRGVFEEFSNGNTVS 271
            EN++  + +     N   
Sbjct: 238 EENMIYYIIQRVIEENYDD 256



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 56/377 (14%), Positives = 114/377 (30%), Gaps = 66/377 (17%)

Query: 213 YFQIAPCFRDEDPRSDRLP----GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
            F I     +E    +R       EF              IL     + R   + F +  
Sbjct: 101 VFPITKDQGEEFLLDNRHLWLRSREFTS------------ILKVRSTIFRSFADFFYDQG 148

Query: 269 TVSNNFLRI-CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
               +   +                   PI ++   + ++ +      K+ ++ P +   
Sbjct: 149 YYQVHTPFMVSTAVEGGSTLFKVDFFGEPIFLNQSAQFYLETMIYSLEKVFTIAPSFR-- 206

Query: 328 AIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI 387
              A+     R   +  +  A       +A+I  R         +  + + +   N + +
Sbjct: 207 ---AEKSRTRRHLTEYWHAEAE------VAWIDNREMMDVEENMIYYIIQRVIEENYDDL 257

Query: 388 R------VRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCW 436
           +        L             D +K  +     +     +LG            +  +
Sbjct: 258 KLLGRDPEALRAMKPPFPRVKYSDIIKVANEIG-MQLKYGDDLGADEERQITMRYCKPVF 316

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGM--ESLKGNDLLSIKAFQYDLVCNGFEIASG 494
           + ++P     +E K       PF MPQ       +  +DLL+ + +         EI  G
Sbjct: 317 VTNYP-----KELK-------PFYMPQDPDNPSEVLNHDLLAPEGYG--------EIIGG 356

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
             R    + ++Q     G+     E+ +       + G  PH G   G+DR+ M ++   
Sbjct: 357 SQRIWDYKELMQRIREAGLD----ESAYYWYIDLRKYGSVPHSGFGLGMDRLAMWIMHLD 412

Query: 555 NVREVSLFPMSQNFCDL 571
           N+RE   +P +      
Sbjct: 413 NIREAIPYPRTIRRTKP 429


>gi|116492342|ref|YP_804077.1| asparaginyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|116102492|gb|ABJ67635.1| asparaginyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 464

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 74/354 (20%), Positives = 132/354 (37%), Gaps = 46/354 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             D    V ++GW+  +R    I FL+I D   I  V    D+   E ++ +R   +   
Sbjct: 14  EHDADVEVEVTGWLKTIRSSKKISFLEINDGSYIKNVQVIMDNNALENSEEIRKAAIYST 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             +V     +  +        E+ A  I IL  +     P+  +   PE +R +   L  
Sbjct: 74  IKVV----GKVADTPKAKQPFEIQASSITILGSSNSDY-PLQKKEHTPEFLR-EQAHLRP 127

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG---- 189
           R +T +     R+ +  ++   + + NF+  +TPI+T+S  EGA +    + ++      
Sbjct: 128 RTNTFYAVFRIRSLVSFAVHQFLQSNNFVYVNTPIITSSDTEGAGEMFKVTTLDLNNLPK 187

Query: 190 ----------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+  P       Q      A  F   +   P FR E+  + R   EF+ 
Sbjct: 188 NEAGEVDSSKDFFKQPTNLTVSGQLNAEAFALAFRNVYTFGPAFRAENSHTTRHASEFWM 247

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL--------------------- 275
           ++ EM+F    DI+NT E++L+ V             FL                     
Sbjct: 248 IEPEMAFANLQDIMNTSEDLLKYVVNYLLENAKEELEFLNGAVDPELKARLEATKDADFA 307

Query: 276 RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           R+ Y +AI        +  NP+   +   TEH  +   +V+ K + +    +  
Sbjct: 308 RVSYTEAIDILMNADQEFENPVEWGIDLQTEHERYLSEKVYQKPVFITDYPKDI 361



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 26/135 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  +I D+P        K I      F M +         D  ++ A   DL+  G  E+
Sbjct: 350 KPVFITDYP--------KDIKA----FYMRENE-------DHKTVAAV--DLLVPGIGEL 388

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    + + +  +   +  +  E          + G   H G   G +R++M + 
Sbjct: 389 IGGSQREERLDKINEKIAEFHLDPKEYE----WYAELRKYGETEHSGFGIGFERLLMYVT 444

Query: 552 GAKNVREVSLFPMSQ 566
           G +N+R+V  FP + 
Sbjct: 445 GIENIRDVIPFPRTP 459


>gi|184155665|ref|YP_001844005.1| asparaginyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|183227009|dbj|BAG27525.1| asparaginyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 431

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 70/310 (22%), Positives = 122/310 (39%), Gaps = 32/310 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
              V   VR+  W+   R  G I FL +RD         +    D   FEIA+ +R E  
Sbjct: 10  PKHVNERVRIGVWLTDKRSSGKIAFLQLRDGTAFFQGVLLKNKVDEETFEIARHLRQEVS 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +             E+  +++E++  ++E P    G +E+       +R 
Sbjct: 70  LWVTGEIHEDTRSKF-------GYEIQIEELELIGDSDEYP---IGNKEHGIDFLLDHRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R R+I +         F +   PILT ++PEG  D       +Q +
Sbjct: 120 LWLRSSKPQAMMRIRDRVIRANYEFFGEHGFTKIDPPILTGNAPEGTTDLFHTEYFDQDA 179

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A   +R +   P FR E  ++ R   EF+ ++ EM+F+ Q++ L
Sbjct: 180 Y--LSQSGQLY-EEAGAMALNRVYSFGPVFRAEKSKTRRHLIEFWMIEPEMAFMHQEESL 236

Query: 251 NTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPDLR 294
              E  +  + ++  +                       + RI YD+AI        D++
Sbjct: 237 ELQEQYVAYLIQKVIDDCSRELEVLGRDPETLKPFTQLPYPRISYDEAIEMLQKAGMDIK 296

Query: 295 NPIIMHNVTE 304
                 +  E
Sbjct: 297 WGEDFGSPEE 306



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 55/152 (36%), Gaps = 27/152 (17%)

Query: 418 NHIAQELGIINC----NCF-EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               ++ G        + F +  +++++P     +  K      +P        +     
Sbjct: 295 IKWGEDFGSPEETYLADQFSKPVFVLNYP-----KAIKPFYMKGHPT-----RDDVYVCA 344

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DLL+ + +         EI  G  R    E + QA ++ G+ ++  +          + G
Sbjct: 345 DLLAPEGYG--------EIIGGSERETDYETLRQAIADAGLDEKDYQ----WYLDLRKYG 392

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             PH G   G++R +  +    +VRE   FP 
Sbjct: 393 SVPHSGYGLGLERFLTWIALQDHVRETIPFPR 424


>gi|152992078|ref|YP_001357799.1| lysyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151423939|dbj|BAF71442.1| lysyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 547

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 65/334 (19%), Positives = 117/334 (35%), Gaps = 14/334 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             D G  V L+G +  +R  G   F  I D  G+ Q+  N D        +V     L  
Sbjct: 54  KKDEGQTVTLTGRIKFIRIMGKAAFAKIEDTDGLVQIYYNRDDLPEGYYNTVAK--KLFE 111

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++  +         TG++ L  + ++I+S A  +PLP          IR++ R+LD+
Sbjct: 112 VGDIIEATGYPFVTQ--TGELTLHCKDLKIVSKA-IMPLPEKFHGLTDHEIRYRQRYLDM 168

Query: 134 RRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   K   + R++I++ +R      +F+E  TP++            V      G   
Sbjct: 169 IMNPEVKETFIMRSKIVSLIRRFFEDHSFLEVETPMMHPIPGGANAKPFVTHHNALGVDR 228

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L   G +  F+I   FR+E       P EF  ++   ++    D++  
Sbjct: 229 YLRIAPELYLKRLTVGGMEAVFEINRNFRNEGMDQTHNP-EFTSIEFYWAYHNYLDLMRL 287

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            E +   +F +     T++     I               +     + ++ E        
Sbjct: 288 TEELFEYIFAQLQMDKTITYGEYEIDCSTPF-------AKVPFVEALTSIGEVPAEVATG 340

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
               I  +             G       D   E
Sbjct: 341 REKAIAYLKEHGVEVNPNLTLGYLQAELFDEFVE 374



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 89/312 (28%), Gaps = 33/312 (10%)

Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
            +  F+       + RY    P+L    +     E          ++ +      E  +I
Sbjct: 213 NAKPFVTHHNALGVDRYLRIAPELYLKRLTVGGMEAVFEINRNFRNEGMDQTHNPEFTSI 272

Query: 330 PAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV 389
                  N     R+ E         L            +    P AK   +    +I  
Sbjct: 273 EFYWAYHNYLDLMRLTEELFEYIFAQLQMDKTITYGEYEIDCSTPFAKVPFVEALTSIGE 332

Query: 390 -----RLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYE 444
                    +   +     G  +         +  +  E   +        +I D+P   
Sbjct: 333 VPAEVATGREKAIAYLKEHGVEVNPNLTLGYLQAELFDEF--VEGKLINPTFITDYP--- 387

Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
                       +P +        +         A +++L   G EIA+G    +     
Sbjct: 388 ---------IDISPLSRRSDDNPEI---------AERFELFMAGKEIANGFNELNDPIDQ 429

Query: 505 LQAFSNVGISKE-----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
            + F     +KE        +      RA   GM P  G   GIDR+VM+L    ++R+V
Sbjct: 430 FERFKAQADAKEATGDEETMHMDLDFIRALGHGMTPTAGEGIGIDRLVMMLTDNHSIRDV 489

Query: 560 SLFPMSQNFCDL 571
            LFP  +    L
Sbjct: 490 ILFPAMKPEAKL 501


>gi|302799647|ref|XP_002981582.1| hypothetical protein SELMODRAFT_154531 [Selaginella moellendorffii]
 gi|300150748|gb|EFJ17397.1| hypothetical protein SELMODRAFT_154531 [Selaginella moellendorffii]
          Length = 507

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 54/293 (18%), Positives = 114/293 (38%), Gaps = 23/293 (7%)

Query: 5   RTHSCGDLGVSDVG-----------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RTH    L                   V ++G +   R  G + FL IRD     Q+  +
Sbjct: 15  RTHKATQLQEKYADLPAGGVADSDEDRVSVAGRIFARRAFGKLAFLGIRDDSASIQLYCD 74

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
                    +S          G ++  +          G++ +    + IL+ +  LPLP
Sbjct: 75  K-----AKLESFTQLKSTVDIGDIVGATGTLKRTE--KGELSVYVDNLVILTKS-ILPLP 126

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS 172
                      R++ R+LD+  +     + + R ++++++R  +    F+E  TPIL  +
Sbjct: 127 EKWHGLTDIEKRYRQRYLDMIMNPEVAGVFRARAKVVSAIRRFVEDLGFLEIETPILQGA 186

Query: 173 SPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F+      +   + L  A + + + ++  GF+R +++   FR+E   +   P
Sbjct: 187 AGGADARPFITHHNSLERDLF-LRIATELHLKRMLVGGFERVYELGRIFRNEGISTRHNP 245

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            EF  +++  ++ + +D++   E ++    E       +      I  +   R
Sbjct: 246 -EFTSIEIYQAYADYNDMMALAEELVTKCAEAIFGNAKLLYQGTEIALERPWR 297



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 25/109 (22%)

Query: 480 FQYDLVCNGFEIASGGIRNHMS-------EVMLQAFSNVGISKEVVENRFG--------- 523
            +++L   G E+A+               E  ++A++             G         
Sbjct: 393 ERFELYICGRELANAFSELTDPIEQRARFEAQIRAYNKQLEEAAAAARDRGESAVKQHKN 452

Query: 524 ---------GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                        A + GMPP  G+  GIDR+VMLL  + ++R+V  FP
Sbjct: 453 DSYEVTLDEDFLTALEYGMPPTAGMGIGIDRLVMLLTDSPSIRDVIAFP 501


>gi|294672843|ref|YP_003573459.1| asparagine--tRNA ligase [Prevotella ruminicola 23]
 gi|294473509|gb|ADE82898.1| asparagine--tRNA ligase [Prevotella ruminicola 23]
          Length = 479

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 53/292 (18%), Positives = 108/292 (36%), Gaps = 28/292 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-- 60
             RT     L  ++ G  V + GWV   R    + F+ + D   I  V    D   F+  
Sbjct: 1   MKRTKIIDVLKSTEYGKEVCVKGWVRTHRSSKAVDFIALNDGSTIKNVQIVVDPTKFDEQ 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           + K + +   +  +G ++       ++       E+ A K+E+  +           +  
Sbjct: 61  VLKDITTGACISAEGTLVESQGAGQSS-------EIQATKLEVYGLCGNDYPMQKKGQ-- 111

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
              +  K   + LR +T    +  R  +  ++        F    TP++TAS  EGA + 
Sbjct: 112 SFEVMRKNAHMRLRTNTFGAVMRIRHNMAMAIHTYFHEHGFFYFHTPLITASDCEGAGNM 171

Query: 181 LVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDE 223
              +  N                 F+    +     Q +  L A+     +   P FR E
Sbjct: 172 FQVTTKNLYDLKKDENGKIIYDDDFFGEQTSLTVSGQLEGELGATALGSIYTFGPTFRAE 231

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +  + R   EF+ ++ E++F++Q+++++  E+ ++       +       FL
Sbjct: 232 NSNTPRHLAEFWMVEPEVAFLDQEELMDLEEDFIKYCVRWALDNCKDDLEFL 283



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 49/149 (32%), Gaps = 9/149 (6%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +  +   + D+P        K      N  T   G +               
Sbjct: 339 HERYLVEEHFKKPVIMTDYP-----RAFKSFYMKQNQDTADGGSVGYKGAVAPGPTMQGT 393

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G +R    + ++   +   +     +          + G  PH G   
Sbjct: 394 DVLFPQIGEIIGGSVREESYDKLMGEINRREMD----QTHLWWYIDTRKWGSCPHAGFGL 449

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G +R+++ + G +N+R+V  FP +    +
Sbjct: 450 GFERLILFVTGMQNIRDVIPFPRTPKSAE 478


>gi|190893501|ref|YP_001980043.1| lysyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|238692556|sp|B3Q0S4|SYK_RHIE6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|190698780|gb|ACE92865.1| lysyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 498

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 61/292 (20%), Positives = 123/292 (42%), Gaps = 20/292 (6%)

Query: 2   HRYRTHSCGDLGVS--------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +LG          +    V ++G V+  R  G  +F+DI D  G  Q+ ++
Sbjct: 36  HFHRTMTNAELGAKYESLEPDVETQDVVTVAGRVYSSRNSG--MFMDIHDASGKIQIFSH 93

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D    E    +    +  I G+        +      G++ ++AQKIE+L+ +  LP+P
Sbjct: 94  KDVTGEEARALLPMIDIGDIIGV------TGVVRRTKRGELTINAQKIEMLTKSL-LPMP 146

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                     +R++ R LD+  +   K    +R++I++ +R  M  + F+E  TP+L + 
Sbjct: 147 EKWHGLSDIELRYRKRHLDIMTNEDSKLRFQQRSKIVSGIRRFMENDGFMEVETPMLQSI 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLP 231
                 +              L  AP+ + +  + SG  D+ F+I   FR+E   +   P
Sbjct: 207 YGGATAEPFKTHHNTLKLDMYLRIAPELFLKRTLVSGLTDKVFEINRNFRNEGVSTRHNP 266

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
            EF  ++   ++ + +D+++ +E +   +               R+ +    
Sbjct: 267 -EFTMMECYWAYADYEDMMDLVERLFEALALSIHGTTEFDFGDKRLSFKGPF 317



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 7/133 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMS 501
           +E   E   I  +H   T     +           +   +++  CN +E+ +     +  
Sbjct: 368 FEEKVEATLIQPSH--VTHFPKDISPFAKEVPGEPRLVERFETYCNAWELGNAFSELNDP 425

Query: 502 EVMLQAFSNVGISKEVVENR----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   +              +          A   GMPP GG+  G+DR++MLL  A ++R
Sbjct: 426 EEQRRRMVEQLEQAHARGEKEKQLDEEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIR 485

Query: 558 EVSLFPMSQNFCD 570
           +V LFP  +N  D
Sbjct: 486 DVILFPARRNKAD 498


>gi|163942293|ref|YP_001647177.1| asparaginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163864490|gb|ABY45549.1| asparaginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 463

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 67/372 (18%), Positives = 132/372 (35%), Gaps = 61/372 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
               V++SGW+  +R      F+++ D       Q+V + +   F+    +     + ++
Sbjct: 17  ADQTVQVSGWIRNLRDSKAFGFIELNDGSFFKGVQIVFDTELENFKEIAKLPLSSSVKVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V++               E+ A+KI++  +++    P+  +R   E +R     L  R
Sbjct: 77  GKVIATPG-------AKQPFEIKAEKIDVEGLSDSDY-PLQKKRHTFEYLR-TIAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+   TPI+T S  EGA +    +  +       
Sbjct: 128 TNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVPKG 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E  D+++  E++L+   +          +F                      R
Sbjct: 248 EPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVINSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           I Y +AI+       + + P+   +   TEH  +    +F + + V    +         
Sbjct: 308 ITYTEAIKVLQESGAEFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI------- 360

Query: 335 GGNRAFCDRMNE 346
              +AF  RMNE
Sbjct: 361 ---KAFYMRMNE 369



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGAEFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M           D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMRMNE-------DGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|325955983|ref|YP_004286593.1| lysyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325332548|gb|ADZ06456.1| lysyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 515

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/301 (20%), Positives = 118/301 (39%), Gaps = 18/301 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +++G +   R  G + F D+ D  G  Q+    D    +  K  +   +    G  +   
Sbjct: 62  KIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDI----GDFLGID 117

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E +     TG++ + A  +  LS A   PLP            ++ R+LDL  +     
Sbjct: 118 GEVM--KTDTGELTIRALHVTFLSKALR-PLPDKYHGLKDVEAIYRQRYLDLITNRDSYM 174

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
               RT+II ++R  +  +NF+E  TP+L        AR F+        + Y +  A +
Sbjct: 175 RFVHRTQIIQAIRDYLNGQNFLEVETPVLHNIPGGAEARPFITHHNALDINLY-MRIALE 233

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  E ++R 
Sbjct: 234 LPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDYHDVMDEAEGIIRA 292

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPIIMHNVTEHFVHSEFR 312
             +  S+   ++     I      RR             D   P+ +   T+     +  
Sbjct: 293 AAKVVSDDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVDFWKPMTLEEATKIAEDHDIH 352

Query: 313 V 313
           V
Sbjct: 353 V 353



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 113/348 (32%), Gaps = 26/348 (7%)

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGV-FEEF-----SNGNTVSNNFLRICYDDA 282
           R        D  M FV +  I+  + + L G  F E       N    +     I + +A
Sbjct: 162 RYLDLITNRDSYMRFVHRTQIIQAIRDYLNGQNFLEVETPVLHNIPGGAEARPFITHHNA 221

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +      +  L  P+    V +     E     +   ++  +       +       + D
Sbjct: 222 LDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNPEFTELESYAAYWDYHD 281

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            M+E                + + G +   G             +   +  + G   +  
Sbjct: 282 VMDEAEGIIRAAAKV-----VSDDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVDFW-- 334

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
              P+            IA++  I     ++   I++  F+E   EE  +D         
Sbjct: 335 --KPMTLEEA-----TKIAEDHDIHVEKFWKVGHIINA-FFEKYCEETIVDPTFVYGHPV 386

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           +    + K  D       ++++   G E  +     +  +   + F      +E   +  
Sbjct: 387 EISPLAKKNAD-DPRFTDRFEIYIMGEEYGNAFSELNDPDDQRERFEAQMEEREAGNDEA 445

Query: 523 G----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                   RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 446 DMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 493


>gi|311272131|ref|XP_003133314.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like [Sus scrofa]
          Length = 501

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 87/381 (22%), Positives = 149/381 (39%), Gaps = 47/381 (12%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKS 64
             DL V      V +   VH  R  G   FL +R        +  V  +      + A +
Sbjct: 48  VSDLTVQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAAN 107

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE-- 122
           +  E ++ ++G+V  R       +     +EL  QKI ++S AE        +   PE  
Sbjct: 108 INKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISSAEPRLPLQLDDAVRPEVE 165

Query: 123 -----------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
                        R   R +DLR  T       ++ I +  R  +I + F+E  TP + +
Sbjct: 166 GEEEGRATVNQDTRLDNRIIDLRTSTSQAVFRLQSGICHLFRENLINKGFVEIQTPKIIS 225

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R  
Sbjct: 226 AASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHL 283

Query: 232 GEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNFL---------- 275
            EF  +D+EM F        ++I +T+  + +G+ E F +    V+  F           
Sbjct: 284 TEFVGMDIEMVFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQMVNKQFPCEPFKFLEPT 343

Query: 276 -RICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYE 325
            R+ Y +A+           D+ DL  P    +  + +    ++F +  K  L+V P Y 
Sbjct: 344 LRLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFYT 403

Query: 326 VWAIPAKGGGGNRAFCDRMNE 346
           +          +     R  E
Sbjct: 404 MPDPRNPKQSNSYDMFMRGEE 424



 Score =  100 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 345 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYD----TDFYILD------KY 394

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 395 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 445

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 446 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501


>gi|225679117|gb|EEH17401.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 636

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/305 (18%), Positives = 123/305 (40%), Gaps = 20/305 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV-----VANP 54
           + +Y +   GD         VR++G ++  R  G  +IF D+R      QV      A  
Sbjct: 111 IKKYESLQKGDQIKE---KEVRIAGRIYTKRSAGAKLIFYDVRAEGVKIQVACQSQNAEG 167

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D +     + +R   ++ + G        T   N   G++ + A+++ +L+      +P 
Sbjct: 168 DVSFEAQHEHLRRGDIIGVVGW----PGRTAPKNRADGELSIFAKEVILLAPCL-HQIPS 222

Query: 115 FGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                  +  R++ R+LDL  +       + R+++I  +R      +F+E  TP++ + +
Sbjct: 223 EHYGLRDQEQRYRQRYLDLIMNDKSRNVFITRSKMITYIRRFFDERDFVEVETPMMNSIA 282

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                   +    +      +  AP+ Y ++L+  G +R +++   FR+E       P E
Sbjct: 283 GGATAKPFITHHNDLNMDMFMRVAPELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-E 341

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F   +   ++ +  D++N  E ++ G+ +  + G   + +           +     P  
Sbjct: 342 FTTCEFYWAYADVYDVMNVTEELVSGLVKHITGGYETTFH----TQTGEEYKVNWKAPWK 397

Query: 294 RNPII 298
           R  +I
Sbjct: 398 RIEMI 402



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 4/95 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++      EI +     +        F      K   ++           + + G
Sbjct: 486 GLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQASQKAQGDDEAQMIDENFCTSLEYG 545

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 546 LPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 580


>gi|198277517|ref|ZP_03210048.1| hypothetical protein BACPLE_03739 [Bacteroides plebeius DSM 17135]
 gi|198270015|gb|EDY94285.1| hypothetical protein BACPLE_03739 [Bacteroides plebeius DSM 17135]
          Length = 467

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 57/288 (19%), Positives = 104/288 (36%), Gaps = 24/288 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F+    
Sbjct: 6   RTKIVDLLKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLANFDE--- 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
                 L   G  +S + E + +       E+ A++IE+L   +        ++ +    
Sbjct: 63  --DLLKLITTGACLSVNGELVKSVGSGQAAEIQAREIEVLGTCDNTYPLQ--KKGHSMEF 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
             +   L  R +T       R  +  ++        F    TP++TAS  EGA      +
Sbjct: 119 LREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPLITASDCEGAGQMFQVT 178

Query: 185 RVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            +N                 F+    +     Q +  L A+     +   P FR E+  +
Sbjct: 179 TMNLYDLKKDENGSIIYDNDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRAENSNT 238

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            R   EF+ ++ E++F + +D ++  E  ++   +   +       FL
Sbjct: 239 PRHLAEFWMIEPEVAFNDINDNMDLAEEFIKYCVQWALDNCYDDVKFL 286



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P     +E K        F M Q         D  +++A  
Sbjct: 342 HERFLVEEHFKRPVILTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 382

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R    + +L     + I  + +           + G  PH G   
Sbjct: 383 V-LFPKIGEIIGGSEREADYDKLLTRIQELNIPMKDMW----WYLDTRKYGSCPHSGFGL 437

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G  N+R+V  FP +  
Sbjct: 438 GFERLLLFVTGMANIRDVIPFPRTPR 463


>gi|225435776|ref|XP_002285737.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297746486|emb|CBI16542.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 135/353 (38%), Gaps = 30/353 (8%)

Query: 5   RTHSCGDL--------GVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RTH+   L           ++ S    V ++G +   R  G + F  +RD  G  Q+   
Sbjct: 99  RTHTANQLQDIYRHLGNGEELNSESDYVSIAGRIVARRAFGKLAFFTLRDDSGTIQLYCE 158

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            +    E  + +++   L   G ++  S          G++ +      +L+ +  LPLP
Sbjct: 159 KERLLNEQFEQLKT---LVDIGDILGVSGSIKRTE--KGELSVYVNSFAVLTKSL-LPLP 212

Query: 114 VFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                      R++ R++D+     +     KR +I++++R  + +  F+E  TP+L  +
Sbjct: 213 DKYHGLTDVDKRYRQRYVDMIANPEVADIFRKRAKIVSAIRRTVESSGFVEVETPVLQGA 272

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           +        V    + G    L  A + + + ++  GF++ +++   FR+E   +   P 
Sbjct: 273 AGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLVGGFEKVYEMGRIFRNEGISTRHNP- 331

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  ++M  ++ + + ++N  E ++           T+      IC +   RR       
Sbjct: 332 EFTTIEMYEAYSDYESMMNMAEEIVTQCALAVCGKLTIDYQGTEICLERPWRRE------ 385

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
                 M N+ +     +F      + V     + A+       +++  +   
Sbjct: 386 -----TMLNLVKEATGIDFNELDNDIKVAKEVALRALGIGHDSKDKSSIEACT 433



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 24/112 (21%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMS-------EVMLQAFSNVGISKEVVENRF------ 522
           +    +++L   G E+A+               E  ++  +    +     +        
Sbjct: 475 AGLTERFELFICGRELANAFSELTDPMDQRGRLEEQVRQHNEKRAAVVSEPDHAEVKTTE 534

Query: 523 -----------GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                           A + GMPP  G+  G+DR+VMLL  + ++R+V  FP
Sbjct: 535 SEDESYEVTLDDDFLTALEYGMPPASGMGLGVDRLVMLLTNSASIRDVIAFP 586


>gi|114581050|ref|XP_001155013.1| PREDICTED: aspartyl-tRNA synthetase isoform 2 [Pan troglodytes]
 gi|114581052|ref|XP_001155062.1| PREDICTED: aspartyl-tRNA synthetase isoform 3 [Pan troglodytes]
          Length = 468

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 88/379 (23%), Positives = 150/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL +      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 17  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 76

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--------- 117
            E ++ I+G+V  R       +     +EL  QKI ++S+AE        +         
Sbjct: 77  KESIVDIEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 134

Query: 118 ----REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                   +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 135 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 194

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 195 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTE 252

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F       N       F      LR
Sbjct: 253 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 312

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    + ++ +    ++F +  K  L+V P Y + 
Sbjct: 313 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMP 372

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 373 DPRNPKQSNSYDMFMRGEE 391



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 312 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 361

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 362 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 412

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 413 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 468


>gi|52143256|ref|YP_083573.1| aspartyl-tRNA synthetase [Bacillus cereus E33L]
 gi|51976725|gb|AAU18275.1| aspartate--tRNA ligase (aspartyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 432

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 5   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGY- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G ++  +   +        +EL A ++++++ AE+LP  +  ++  
Sbjct: 60  ---KVDVESVVHVIGEIVETTKTEL-------GVELLAHEVKVINGAEQLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++  ++S    +   +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKSTFVHSFSEFLTENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+SF+ +  +++    +VLR +F++ +         L+I
Sbjct: 228 ELSFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 48/164 (29%), Positives = 68/164 (41%), Gaps = 28/164 (17%)

Query: 406 PLKFCSFA--ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
             K+C  +   D      + LG      +  EF +I  +P             A   +TM
Sbjct: 287 KSKYCKESPVGDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTM 335

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P     S+  +         +DL+  G EI SG  R H  E++L +F   G+      ++
Sbjct: 336 PNNENSSITDS---------FDLLYKGLEITSGAQRIHNYEMLLDSFKGKGLHP----DK 382

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           F      F+ G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 383 FQSYLNTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|197123222|ref|YP_002135173.1| asparaginyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196173071|gb|ACG74044.1| asparaginyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 434

 Score =  189 bits (479), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 72/348 (20%), Positives = 120/348 (34%), Gaps = 37/348 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWV 70
               G  + L GW+H  R  G + FL +RD  G  Q V    N     F+ +  +  E  
Sbjct: 11  AHHEGKEITLHGWLHNRRSSGKLHFLQLRDGTGTIQCVVFKGNVTPEVFQASDHLPQETS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + GLV       I         EL  + +++  V+        G +E+  +   + R 
Sbjct: 71  LTVTGLVKKDERSPI-------GFELDVRDLQV--VSRPAQEFPIGHKEHGVAFLMEQRH 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R  +  ++R       F     PI T S+ EG          + G 
Sbjct: 122 LWLRSQRQQVILRVRHTVEKAIRDFFDQRGFTLVDAPIFTPSACEGTSTLFEVPYFDLGK 181

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E+++++ D  +
Sbjct: 182 AY-LTQSGQLYMEAA-AMALGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVAYMDLDGDM 239

Query: 251 NTMENVLRGVFE----------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
             ME  +  V +                + S    V   F RI Y DA+         ++
Sbjct: 240 ELMEQFVSYVVQTALEKHRVELATVLERDVSLLEKVKPPFPRITYTDAVEVIQKAGHPMK 299

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
                    +     E  V +K          +    K     +   D
Sbjct: 300 WG-------DDIGGDEETVVAKQFDRPVMVHRYPAEMKAFYFKKDPSD 340



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 60/210 (28%), Gaps = 44/210 (20%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIA----QELGIINCNCFEFCWIMDFPFYEWNEEEK 450
           DGD             +     R  +A    +++ ++            FP   + +  +
Sbjct: 236 DGDMELMEQFVSYVVQTALEKHRVELATVLERDVSLLEKVK------PPFPRITYTDAVE 289

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD---LVCN-------------------- 487
            I  A +P  M  G      G D  ++ A Q+D   +V                      
Sbjct: 290 VIQKAGHP--MKWGDDI---GGDEETVVAKQFDRPVMVHRYPAEMKAFYFKKDPSDPKVA 344

Query: 488 -GFEIASGGIRNH-----MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
            G ++ +             E  L          ++ +  F       + G  PH G   
Sbjct: 345 LGCDVLAPEGYGEIIGGGQREDDLATLEAAIEHHQLPKQAFEWYLDLRRYGTVPHAGFGM 404

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G++R V  + G  +VRE   F         
Sbjct: 405 GVERCVAWICGLHHVRETIPFARMMERITP 434


>gi|229017507|ref|ZP_04174408.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|228743831|gb|EEL93932.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 437

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 74/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C +      G  V L GWV +VR  G + FL +RD  G+ Q V   + A + 
Sbjct: 10  MKRSLTKECKE----QSGKVVLLQGWVKKVRHLGNVSFLLLRDRTGVIQCVLENELAGY- 64

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ I G ++  S   +        +E+ A +++IL+ AE LP  +  ++  
Sbjct: 65  ---KVDVESVVQIVGQIVETSKTEL-------GVEVLAHEVKILNGAEPLPFEINKKKLQ 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 115 VGLDQLLNERVLSLRHERIAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 174

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F++AP +R E   S R   E+  LD+
Sbjct: 175 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEVAPVYRAEHHNSSRHLNEYISLDV 232

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 233 ELGFIHDFYEVMQLETDVLRYMFQQVAKICEKELQLLQI 271



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP    E++  
Sbjct: 302 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTMPNKENEAVTD 350

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+       +F      F+ 
Sbjct: 351 S---------FDLLYKGLEITSGAQRIHNHEMLLASFKEKGLHP----EKFQSYLNTFRY 397

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 398 GCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 431


>gi|229096717|ref|ZP_04227688.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228686923|gb|EEL40830.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 432

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 71/273 (26%), Positives = 124/273 (45%), Gaps = 15/273 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M +  T S        VG  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 1   MDQIMTRSLAQACTEHVGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ I G ++  S   +        +E+ A ++++L+ AE+LP  +  ++  
Sbjct: 60  ---KVDVESVVQIVGEIVETSKTEL-------GVEVLAHEVKVLNGAEQLPFELNKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        +  +  S    +   +FI   TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKATLAQSFSDYLAENDFIRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVS 271
           E+ F+ +  +++    +VLR +F++        
Sbjct: 228 ELGFIDDFHEVMQLETDVLRHMFQQVGETCEKE 260



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 63/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     ++  
Sbjct: 297 GDLDTEGEKLLGKYVKATYNSEFVFITHYP-----------KEARPMYTMPNKENPTITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  +++L +F   G+       +F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYDLLLASFKEKGLHL----EKFQSYLNTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|229135391|ref|ZP_04264180.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228648087|gb|EEL04133.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 463

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/372 (18%), Positives = 132/372 (35%), Gaps = 61/372 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
               V++SGW+  +R      F+++ D       Q+V + +   F+    +     + ++
Sbjct: 17  ADQTVQVSGWIRNLRDSKAFGFIELNDGSFFKGVQIVFDTELENFKEIAKLPLSSSVKVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V++               E+ A+KI+I  +++    P+  +R   E +R     L  R
Sbjct: 77  GKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+   TPI+T S  EGA +    +  +       
Sbjct: 128 TNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNNVPKG 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAEFWMV 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E  D+++  E++L+   +          +F                      R
Sbjct: 248 EPEIAFAELGDVMDLTEDMLKYAMKYVLEHAPEEMDFFNSFVDKTVLERMNNVINSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           I Y +AI+       + + P+   +   TEH  +    +F + + V    +         
Sbjct: 308 ITYTEAIKVLQESGAEFKYPVEWGIDLQTEHERYLSEEIFKRPVFVTDYPKDI------- 360

Query: 335 GGNRAFCDRMNE 346
              +AF  RMNE
Sbjct: 361 ---KAFYMRMNE 369



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 36/204 (17%)

Query: 378 HLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGI-----IN 428
             N    + +  R++   + D       + +K    +            +L       ++
Sbjct: 284 FFNSFVDKTVLERMNNVINSDFGRITYTEAIKVLQESGAEFKYPVEWGIDLQTEHERYLS 343

Query: 429 CNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
              F+   ++ D+P        K I      F M           D  ++ A   DL+  
Sbjct: 344 EEIFKRPVFVTDYP--------KDIKA----FYMRMNE-------DGKTVAAT--DLLVP 382

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  E+  G  R    +V++     +G++    E  +       + G   H G   G +R 
Sbjct: 383 GIGELIGGSQREERMDVLVDRIKELGMN----EEDYWWYLELRKYGGTKHAGFGLGFERF 438

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           +M + G  N+R+V  FP +    +
Sbjct: 439 LMYITGMANIRDVIPFPRTPGSSE 462


>gi|332993840|gb|AEF03895.1| asparaginyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 465

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 130/385 (33%), Gaps = 51/385 (13%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCI 73
           VG  V + GWV   R    G+ F+ + D       QVVA    + +   + + +   L +
Sbjct: 16  VGESVTVKGWVRTRRDSKAGLSFIALHDGSCFDPIQVVALSSLSNYADVQRLTASCSLSV 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V +   +  +       +E+ A ++E+L   E         + +      +Y  L  
Sbjct: 76  TGVVKASQGQGQS-------VEIEATEVEVLGWVENPDTYPMSAKRHSIEYLREYAHLRP 128

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG---- 189
           R + +      R  +  ++            STPILTAS  EGA +    S ++      
Sbjct: 129 RTNVIGAVTRVRNCLSQAIHRFFHERGHFWVSTPILTASDTEGAGEMFRVSTLDMMNLPL 188

Query: 190 ----------SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+          Q       +   + +   P FR E+  + R   EF+ 
Sbjct: 189 DDKGNVDYSEDFFGKETYLTVSGQLNVETYCTAMSKVYTFGPTFRAENSNTSRHLAEFWM 248

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFL 275
           ++ E++F +  DI    E++L+ V +                            VS++F+
Sbjct: 249 IEPEVAFADLSDIAQLAEDMLKYVCKAVLEELPDDMNFFAQRIKKDAVERLEKLVSSDFV 308

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
           R+ Y DAI      K     P+      +     E  +  + +      + +    K   
Sbjct: 309 RMDYTDAIDILQNCKKTFEFPVEWG--IDLSSEHERYLAEEHVGAPIIMQNYPKDIKAFY 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 M-RINDDGKTVAAMDVLAPGIGEII 390



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 74/225 (32%), Gaps = 28/225 (12%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FW ++     A +  +A+    +     +  L+    D  FF                + 
Sbjct: 246 FWMIEPEVAFADLSDIAQLAEDMLKYVCKAVLEELPDDMNFFAQRIKKDAVERLEKLVSS 305

Query: 420 IAQELGIIN--------CNCFEF--CWIMDFPFYEWNEEEKKIDFAHN---PFTMPQGGM 466
               +   +           FEF   W +D      + E ++     +   P  M     
Sbjct: 306 DFVRMDYTDAIDILQNCKKTFEFPVEWGID-----LSSEHERYLAEEHVGAPIIMQNYPK 360

Query: 467 E----SLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           +     ++ ND     A   D++  G  EI  G  R    +V       + +SK      
Sbjct: 361 DIKAFYMRINDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVFDARLEEMELSK----ED 415

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +       + G  PH G   G +R+V  + G +NVR+V  FP + 
Sbjct: 416 YAWYRDLRRYGTVPHSGFGLGFERLVAYVTGMQNVRDVIPFPRTP 460


>gi|288573299|ref|ZP_06391656.1| asparaginyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288569040|gb|EFC90597.1| asparaginyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 434

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 70/322 (21%), Positives = 119/322 (36%), Gaps = 33/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT---QVVANPDSACFEIAKSVRSEWV 70
              V   V + GW++  R  G I FL IRD  G      V        FE AK +  E  
Sbjct: 12  PQHVEEEVTIKGWMYNKRSSGKIHFLQIRDGSGFVQAVMVKKEVSPEEFEAAKKLWMEAS 71

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I G V S              +EL+   I++            G++++        R 
Sbjct: 72  VEITGTVRSDDR-------APSGVELTVSNIKV--NHNPTDEYPIGKKDHGVDFLLDNRH 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R RI+ S R  +   +F+   +PI+T +  EGA         +Q +
Sbjct: 123 LWLRSQRQRAIMTIRERIVWSWRQFLHDRDFLLVDSPIITGAIGEGASGLFELDYFDQKA 182

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           + A  Q  Q Y +   A+ + + +   P FR E  ++ R   EF+ L+ E+++ +  D +
Sbjct: 183 YLA--QTGQLYAEAA-AAAYGKVYCFGPTFRAEKSKTRRHLTEFWMLEPEVAYYDHKDNM 239

Query: 251 NTMENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDLR 294
           +  E ++    E+                          F RI Y DA+++       + 
Sbjct: 240 DLQEALVSYTVEQVLEHCKEELALLERELSPLKSVLEGPFYRISYRDAVKKLNELGSSIE 299

Query: 295 NPIIM--HNVTEHFVHSEFRVF 314
               +   + T      +  VF
Sbjct: 300 FGDDLGAEDETILTQQYDRPVF 321



 Score = 67.8 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 58/173 (33%), Gaps = 22/173 (12%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
           +G        D +K  +           +LG  +       +  D P +      +    
Sbjct: 276 EGPFYRISYRDAVKKLNELGS-SIEFGDDLGAEDETILTQQY--DRPVFV-----ECYPK 327

Query: 455 AHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
               F M +     E++   DLL+ + +         EI  G  R    + +     + G
Sbjct: 328 GAKAFYMKENPDDKETVLCADLLAPEGYG--------EIIGGSQREDDLDKLTARMESDG 379

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           +      + +G      + G   H G   G++R +  + G  ++REV  +P +
Sbjct: 380 LDM----DSYGWYLDLRRYGTFVHSGFGIGLERTIAWICGLHHIREVIPWPRT 428


>gi|222087177|ref|YP_002545712.1| lysyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221724625|gb|ACM27781.1| lysyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 498

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 61/293 (20%), Positives = 123/293 (41%), Gaps = 20/293 (6%)

Query: 2   HRYRTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +L     G          V ++G V+  R  G  +F+DI D  G  Q+ ++
Sbjct: 36  HFHRTLTNAELTAKYEGLEPDTETTDVVTVAGRVYSSRNSG--MFMDIHDASGKIQIFSH 93

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D    +    +    +  I G+        +      G++ ++AQ+I +L+ +  LP+P
Sbjct: 94  KDVTGEDARALLPMIDIGDIIGV------TGVVRRTKRGELTINAQQITMLTKSL-LPMP 146

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                     +R++ R LD+  +   K    +R+RI++ +R  M  + F+E  TP+L + 
Sbjct: 147 EKWHGLSDIELRYRKRHLDIMTNEESKLRFQQRSRIVSGIRRFMEDDGFMEVETPMLHSV 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLP 231
                 +              L  AP+ + +  + SG  D+ F+I   FR+E   +   P
Sbjct: 207 YGGATAEPFKTHHNTLKLDMYLRIAPELFLKRTLVSGLTDKVFEINRNFRNEGVSTRHNP 266

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            EF  ++   ++ + +DI++ +E +   +          +    +I +    R
Sbjct: 267 -EFTMMECYWAYADYEDIMDLVERLFSTLAMSIHGSTEFAFGDKQISFKGPFR 318



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 4/126 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +    +    P+      K          +++  CN +E+ +     +  E      
Sbjct: 373 EGTLIQPSHVTHFPKDISPFAKEVPGEPRLVERFETYCNAWELGNAFSELNDPEEQRARM 432

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                       +          A   GMPP GG+  G+DR++MLL  + ++R++ LFP 
Sbjct: 433 VEQLEQAHARGEKQKELDEEFLDAIDQGMPPAGGLGIGVDRLIMLLTNSPSIRDIILFPA 492

Query: 565 SQNFCD 570
            +   D
Sbjct: 493 RRAKAD 498


>gi|254497935|ref|ZP_05110699.1| asparaginyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254352829|gb|EET11600.1| asparaginyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 467

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 65/389 (16%), Positives = 121/389 (31%), Gaps = 50/389 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G  +V   V + GWV   R    G+ F+ + D      +              +      
Sbjct: 13  GAINVDEHVTVRGWVKTRRDSKAGLSFISVHDGSCFAPIQIVATDGLANYHDEITKLNA- 71

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  S + + +       E+ A++I+++   E         + +          L
Sbjct: 72  ---GCSLIASGKLVASQGKGQSFEIQAEQIQVVGWVENPDTYPIQAKRHSLEFLRDVAHL 128

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
             R +T       R  +  ++      + +    TPI+TAS  EGA +    S ++  + 
Sbjct: 129 RPRTNTFSAVTRVRHCLSQAIHRFFHEQGYFWIHTPIITASDCEGAGEMFRVSTLDLLNI 188

Query: 192 YALPQA-----------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
              PQ                    Q           + +   P FR E+  + R   EF
Sbjct: 189 PKNPQGQIDFSKDFFGKETFLTVSGQLNLEAYCMAMSKVYTFGPTFRAENSNTSRHLAEF 248

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNN 273
           + ++ E++F    DI +  +N+LR + +   N                      +   + 
Sbjct: 249 WMIEPEVAFATLSDICDLSQNMLRYLCKAVLNECLDDMEFFNQFVAPGCLERLKHIADSE 308

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           F  + Y DAIR       +   P+   +   +EH  +      +++    P         
Sbjct: 309 FEVMTYTDAIRVLEKSGHNFEFPVSWGLDLQSEHERY-----LAEVHCKKPVILTNYPQE 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
             G   R   D     A     PG+  I 
Sbjct: 364 IKGFYMRLNDDEKTVAAMDVLAPGIGEII 392



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 14/153 (9%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAH----NPFTMPQGGMESL---KGNDLLSIK 478
           ++  +   F + + +     +E E+ +   H       T     ++       +D  ++ 
Sbjct: 320 VLEKSGHNFEFPVSWGLDLQSEHERYLAEVHCKKPVILTNYPQEIKGFYMRLNDDEKTVA 379

Query: 479 AFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           A   D++  G  EI  G  R    +++ +      ++K      +       + G  PH 
Sbjct: 380 AM--DVLAPGIGEIIGGSQREERLDILDRRIEECNLNK----ESYQWYRDLRRYGTVPHA 433

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G   G +R+V  + G  NVR+V  FP +    D
Sbjct: 434 GFGLGFERLVSYVTGLANVRDVIPFPRTPGHAD 466


>gi|171463252|ref|YP_001797365.1| lysyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238689052|sp|B1XTS4|SYK_POLNS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|171192790|gb|ACB43751.1| lysyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 514

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/309 (20%), Positives = 125/309 (40%), Gaps = 22/309 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y + +  +L    +   V+++G +   R  G   F  I+D  G  Q   N + +  ++  
Sbjct: 54  YDSLTKKELAAKKI--HVKVAGRMVLKRVMGKTSFATIQDRSGQIQFYINDELSGADVHG 111

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           + +   +    G  +S        N   G++ +    + +LS +   PLP          
Sbjct: 112 AFKHWDM----GDFISTEGNLFKTN--KGELSVECSNLRLLSKSLR-PLPDKFHGLSDLE 164

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            +++ R++DL  +   ++  K R+  I S+R  M+  +F+E  TP+L        A+ F+
Sbjct: 165 TKYRQRYVDLIVNPESRSTFKARSNAIASLRRHMLDADFMEVETPMLHPIPGGAAAKPFI 224

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     + L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   
Sbjct: 225 THHNALDMQMF-LRIAPELYLKRLVVGGFERVFEINHNFRNEGV-SPRHNPEFTMMEFYA 282

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRYGTDKPD 292
           ++ +   +++  E ++R    +               +S  F R+   +AI +Y      
Sbjct: 283 AYTDYRWLMDFTEGLIRAAAIDAQGTAVLTHQGRELDLSKPFQRLTITEAILKYCGQSGK 342

Query: 293 LRNPIIMHN 301
                 + +
Sbjct: 343 SYEAAQLED 351



 Score =  107 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 5/133 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   EE   +  +      +    + + +D       +++L   G EIA+G    + +
Sbjct: 383 LFELVAEEHLWEPTYIIDYPIEVSPLA-RESDTRPGITERFELFITGREIANGFSELNDA 441

Query: 502 EVMLQAFSNVGISKEVVEN---RFGG-LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F      KE  +     F     RA + GMPP GG   GIDR++MLL  A N+R
Sbjct: 442 EDQANRFRKQVEQKEAGDEEAMYFDHDFIRALEYGMPPTGGCGIGIDRLIMLLTDAPNIR 501

Query: 558 EVSLFPMSQNFCD 570
           +V LFP  +   D
Sbjct: 502 DVILFPHLRREED 514


>gi|294101384|ref|YP_003553242.1| asparaginyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616364|gb|ADE56518.1| asparaginyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 434

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 76/349 (21%), Positives = 125/349 (35%), Gaps = 29/349 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT---QVVANPDSACFEIAKSVRSEWV 70
               G  V + GW++  R  G I FL +RD  G      V        FE AK +  E  
Sbjct: 12  AQHEGESVTIKGWMYNKRSSGKIHFLQLRDGTGTVQGVMVKREVSEEAFENAKRLWLEAS 71

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G V                +EL+   ++++   +E      G++++        R 
Sbjct: 72  VEVEGTVRLDER-------APSGVELTVTGLKVIQNPDEEYP--IGKKDHGIDFLLDNRH 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R R+I + R  +  E F+   +PILT S  EGA             
Sbjct: 123 LWLRSSRQQAIMRIRERVIWAAREYLHNEGFMLIDSPILTGSIGEGASGLFELDYFENDK 182

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q  Q Y +    + F + +   P FR E  ++ R   EF+ L+ E++F + D  +
Sbjct: 183 AY-LAQTGQLYAEAAA-AAFGKVYCFGPTFRAEKSKTRRHLTEFWMLEPEVAFYDHDLNI 240

Query: 251 NTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
              EN++  + E               + S    V   F RI YD AI            
Sbjct: 241 KLQENLVAYIVEHVLLHCKNELESLGRDLSKLEKVKPPFYRITYDKAIEMLHELGSSTPY 300

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                N  E  +  +F     +       + + +       +   CD +
Sbjct: 301 GDDFGNEDETILTQQFDKPIFVECYPKKVKAFYMKEHPENPDLVLCDDL 349



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 19/129 (14%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQ-GGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGI 496
           D P +      +        F M +      L   +DLL+ + +         EI  G  
Sbjct: 317 DKPIFV-----ECYPKKVKAFYMKEHPENPDLVLCDDLLAPEGYG--------EIIGGSQ 363

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R       ++        + + E  +       + G   H G   GI+R++  + G +++
Sbjct: 364 REDD----MKRLIARIKEEGLNEKSYDWYLDLRKFGTFVHSGFGMGIERVIAWICGLEHI 419

Query: 557 REVSLFPMS 565
           RE S +P +
Sbjct: 420 REASPWPRT 428


>gi|269792728|ref|YP_003317632.1| lysyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100363|gb|ACZ19350.1| lysyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 505

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 80/383 (20%), Positives = 148/383 (38%), Gaps = 35/383 (9%)

Query: 5   RTHSCG-------DLGVSDVGSFV-RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           R HS G        L     G  +  ++G +  +R HG   F  + +  G  Q+    D 
Sbjct: 45  RQHSVGYVRERYDHLAPDQEGEELLSVAGRIMTLRRHGKASFATLEEDSGRIQLYFQLDQ 104

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E     +        G ++  +          G++ +   + ++L+ A   PLP   
Sbjct: 105 LGEESYGFFKKW---VDTGDILGVNGRAF--RTQRGELSIKVTEFKLLTKALR-PLPEKW 158

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSP 174
                + +R++ R+LDL  +   +   + RTRII ++R  M +   +E +TPIL T +  
Sbjct: 159 HGLKDQEVRYRQRYLDLMVNPEVRETFRKRTRIIQTVRRVMESHGTLEVTTPILSTLAGG 218

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+          Y L  A + Y + L+   FDR ++I P FR+E       P EF
Sbjct: 219 ANARPFVTFHNALGIPMY-LRIATELYLKRLVVGMFDRVYEIGPNFRNEGIDLKHNP-EF 276

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
             +++  ++   +D++N  E +L    +      T +     IC++   RR         
Sbjct: 277 TAMEVYWAYANNEDMMNLCEEILVACADAV-GSRTFTYQGREICFEPPFRR--------- 326

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354
               M ++       +F + S   +     E   +    G   R     + E+  +  + 
Sbjct: 327 --ATMMDLVREHTGIDFEIISDEEARRIALERKVVEELKGYETRYHL--LPEFFDAYVED 382

Query: 355 GLAYIFWRLDESGNVAGMGPVAK 377
            L    + +   G+   + P+AK
Sbjct: 383 KLIQPTFVI---GHPTVISPLAK 402



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F++   E+K I               + +  D   I   +++L  NG E+A+     +  
Sbjct: 375 FFDAYVEDKLIQPTFVIGHPTVISPLAKRNPDNPDI-TDRFELFVNGSELANAFSELNDP 433

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      KE  ++           A + G+PP GG+  GIDR+VMLL  +K++R
Sbjct: 434 LDQRERFLEQVRQKEAGDDEAHVFDEDFINALEYGLPPTGGMGIGIDRLVMLLTDSKSIR 493

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 494 DVILFPTMK 502


>gi|293380366|ref|ZP_06626437.1| lysyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|290923049|gb|EFD99980.1| lysyl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 516

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 64/321 (19%), Positives = 121/321 (37%), Gaps = 20/321 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L         +++G +   R  G + F D+ D  G  Q+    D    + 
Sbjct: 44  EKYGNEDKEELNADMP--KTKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDN 101

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  +   +    G  +    E +     TG++ + A  +  LS A   PLP        
Sbjct: 102 YKIFKKSDI----GDFLGIDGEVM--KTDTGELTIRALHVTFLSKALR-PLPDKYHGLKD 154

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
               ++ R+LDL  +         RT+II ++R  +  +NF+E  TP+L        AR 
Sbjct: 155 VEAIYRQRYLDLITNRDSYMRFVHRTQIIQAIRDYLNKQNFLEVETPVLHNIPGGAEARP 214

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  A +   + L+    +R ++I   FR+E   +   P EF +L+ 
Sbjct: 215 FITHHNALDIDLY-MRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELES 272

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PD 292
             ++ +  D+++  E ++R   +  S+   ++     I      RR             D
Sbjct: 273 YAAYWDFHDVMDEAEGIIRAAAKVVSDDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVD 332

Query: 293 LRNPIIMHNVTEHFVHSEFRV 313
              P+ +   T+     +  V
Sbjct: 333 FWKPMTLEKATKIAEDHDIHV 353



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 113/348 (32%), Gaps = 26/348 (7%)

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVL-RGVFEEF-----SNGNTVSNNFLRICYDDA 282
           R        D  M FV +  I+  + + L +  F E       N    +     I + +A
Sbjct: 162 RYLDLITNRDSYMRFVHRTQIIQAIRDYLNKQNFLEVETPVLHNIPGGAEARPFITHHNA 221

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +      +  L  P+    V +     E     +   ++  +       +       F D
Sbjct: 222 LDIDLYMRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNPEFTELESYAAYWDFHD 281

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            M+E                + + G +   G             +   +  + G   +  
Sbjct: 282 VMDEAEGIIRAAAKV-----VSDDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVDFW-- 334

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
              P+            IA++  I     ++   I++  F+E   EE  +D         
Sbjct: 335 --KPMTLEKA-----TKIAEDHDIHVEKFWKVGHIINA-FFEKYCEETIVDPTFVYGHPV 386

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           +    + K  D       ++++   G E  +     +  +   + F      +E   +  
Sbjct: 387 EISPLAKKNAD-DPRFTDRFEIYIMGEEYGNAFSELNDPDDQRERFEAQMEEREAGNDEA 445

Query: 523 G----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                   RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 446 DMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 493


>gi|255513954|gb|EET90219.1| lysyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 485

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 66/337 (19%), Positives = 141/337 (41%), Gaps = 24/337 (7%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSAC 58
           R H   ++        G  V  +G +  +R  G + F+D+ D  G  QV+A   + D   
Sbjct: 28  RNH-AAEITSAFEEFNGKAVSAAGRIVGMRHMGKLYFMDLLDQTGKIQVLASASDLDEMS 86

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            +I   + +  ++ + G V              G+I + A ++ +LS + +  +P     
Sbjct: 87  LKIVDLLDTGDIIGVHGTV---------TKTKRGEISIGASEVVMLSKSLK-SMPEKFHG 136

Query: 119 EYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                IR++ R+LDL     +    + R +I+  MR  + +  + E  TP+L  +     
Sbjct: 137 LNDVEIRYRKRYLDLIANPEVRNFFITRAKILKYMRDFLDSRGYTEFETPVLQPAYGGAN 196

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
               V       S   L  + + Y + L+  GF++ ++++  FR+ED  S   P EF Q+
Sbjct: 197 ATPFVTHYNAIDSDVYLRISDELYLKRLIIGGFEKVYEVSKDFRNEDMDSTHNP-EFTQI 255

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR-YGTDKPDLRNP 296
           +   ++ + +D +   E +L G+ +     + + +    + +    ++ Y  ++   R+ 
Sbjct: 256 EAYEAYKDYNDYMEMTEELLGGMVKHIFGSHKIEHRGRELDFTPPFKKLYWVEELKKRSG 315

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           I +  +T+    SE +  S+   ++   +     A  
Sbjct: 316 IDVSRITD----SESKEISQKEKLDIPIKNAYHVADA 348


>gi|166033143|ref|ZP_02235972.1| hypothetical protein DORFOR_02865 [Dorea formicigenerans ATCC
           27755]
 gi|166027500|gb|EDR46257.1| hypothetical protein DORFOR_02865 [Dorea formicigenerans ATCC
           27755]
          Length = 479

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 63/356 (17%), Positives = 117/356 (32%), Gaps = 51/356 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVL 71
            + +   + + GWV  +R      F+ I D    T +    + D   FE    +     +
Sbjct: 30  EAYLDKEITVGGWVRSIRDSKAFGFIVINDGTFFTPLQVVYHDDMENFEEISKLNVGAAV 89

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +++               E+ A+ + +   +     P+  +R   E +R     L
Sbjct: 90  VVTGTLVATPQ-------AKQPFEIQAKTVTVEGASAPDY-PLQKKRHSFEYLR-TIAHL 140

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +T       R+    ++        F+   TPI+T S  EGA +    + ++    
Sbjct: 141 RPRTNTFQAVFRVRSLTAYALHKFFQERGFVYVHTPIITGSDCEGAGEMFRVTTMDMENV 200

Query: 190 ------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+    +     Q      A  F   +   P FR E+  + R   EF
Sbjct: 201 PKTEDGAVDYTQDFFGKETSLTVSGQLNAETYAQAFGNVYTFGPTFRAENSNTTRHAAEF 260

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + L+ EM+F + +D ++  E++L+ V            NF                    
Sbjct: 261 WMLEPEMAFADLEDDMDLAEDMLKYVINYVMENAPEEMNFFNSFVDKGLIDRLTNVATSE 320

Query: 276 --RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
             RI Y DAI             +   +   TEH  +    V+ + + V    +  
Sbjct: 321 FARITYTDAIEILKKHNDKFEFKVSWGIDLQTEHERYLTEEVYKRPVFVTDYPKDI 376



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 52/150 (34%), Gaps = 24/150 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +         ++ D+P        K I      F M Q         D  ++ A  
Sbjct: 354 HERYLTEEVYKRPVFVTDYP--------KDIKA----FYMKQ-------NPDGKTVAAVD 394

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    E +      +G+        +G      + G   H G   
Sbjct: 395 C-LVPGIGEIIGGSQREDDYEKLATRMEELGMKT----EDYGFYMDLRKYGSTRHAGFGL 449

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R +M L G  N+R+V  FP + N C+L
Sbjct: 450 GFERCIMYLTGMGNIRDVVPFPRTVNNCEL 479


>gi|218663109|ref|ZP_03519039.1| lysyl-tRNA synthetase protein [Rhizobium etli IE4771]
          Length = 498

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 61/295 (20%), Positives = 124/295 (42%), Gaps = 26/295 (8%)

Query: 2   HRYRTHSCGDLGVS--------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +LG          +    V ++G V+  R  G  +F+DI D  G  Q+ ++
Sbjct: 36  HFHRTMTNAELGTKYESLEPDVETQDVVTVAGRVYSSRNSG--MFMDIHDASGKIQIFSH 93

Query: 54  PDSACFE---IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
            D    E   +   +    ++   G+V              G++ ++AQKIE+L+ +  L
Sbjct: 94  KDVTGEEARPLLPMIDIGDLIGDTGVVRRTKR---------GELTINAQKIEVLTTSL-L 143

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           P+P          +R++ R LD+  +   K    +R++I++ +R  M  + F+E  TP+L
Sbjct: 144 PMPEKWHGHSDIELRYRKRHLDIMTNEDSKLRFQQRSKIVSGIRRFMENDGFMEVETPML 203

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSD 228
            +       +              L  AP+ + +  + SG  D+ F+I   FR+E   + 
Sbjct: 204 QSIYGGATAEPFKTHHNTLKLDMYLRIAPELFLKRTLVSGLTDKVFEINRNFRNEGVSTR 263

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
             P EF  ++   ++ + +D+++ +E +   +               R+ +    
Sbjct: 264 HNP-EFTMMECYWAYADYEDMMDLVERLFETLALYIHGTTEFDFGDKRLSFKGPF 317



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 5/132 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E   I  +H     P+      K          +++  CN +E+ +     +  E
Sbjct: 368 FEEKVEATLIQPSHVI-HFPKDISPFAKEVPGEPRLVERFETYCNAWELGNAFSELNDPE 426

Query: 503 VMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              +                +        A   GMPP GG+  G+DR++MLL  A ++R+
Sbjct: 427 EQRRRMVEQLEQAHARGENDKQLDEEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIRD 486

Query: 559 VSLFPMSQNFCD 570
           V LFP  ++  D
Sbjct: 487 VILFPARRSKAD 498


>gi|188995082|ref|YP_001929334.1| asparaginyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|259511570|sp|B2RK42|SYN_PORG3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|188594762|dbj|BAG33737.1| asparaginyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 469

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 55/291 (18%), Positives = 105/291 (36%), Gaps = 23/291 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
              RT     L    VG  + + GWV   R +  + F+ + D   I  +    D A F+ 
Sbjct: 4   KMKRTRIADALHGGLVGQEINIKGWVRTKRGNKAVNFIALNDGSTIHNMQIVADLASFDA 63

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+           G  +      + +      +E+ A  IEI   A+    P+  +    
Sbjct: 64  AQM-----SQITTGACIGVIGTLVESQGAGQSVEVQASAIEIYGTADPATYPLQKKGHTL 118

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +   L  R +T       R  +  ++      + +     P++TAS  EGA    
Sbjct: 119 EFLR-EIAHLRPRTNTFGVIYRIRHHMAIAIHTFFHNKGYYYFHAPLITASDCEGAGQMF 177

Query: 182 VPSRVNQG--------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDED 224
             + +N                 F+    +     Q +  + A      +   P FR E+
Sbjct: 178 QVTTLNPDSLPRTEEGQVDYRKDFFGRHTSLTVSGQLEGEMAAMALGGIYTFGPTFRAEN 237

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
             + R   EF+ ++ E++F+E +D ++  E  ++   +   +      +FL
Sbjct: 238 SNTPRHLAEFWMIEPEVAFLEIEDNMDLAEEFIKYCVQWALDNCMDDISFL 288



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 67/196 (34%), Gaps = 23/196 (11%)

Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFP 441
            +   +    D +  D   F+   P    ++    R      L     N  +F    +FP
Sbjct: 283 DDISFLSEHFDKELIDRLKFVLEKPFVRLAYTEGIRI-----LEEAVKNGVKF----EFP 333

Query: 442 FY---EWNEEEKKIDFAHNPFTMPQGGMES-------LKGNDLLSIKAFQYDLVCNGFEI 491
            Y   +   E ++     +  T               +K ND          L     EI
Sbjct: 334 IYWGADLASEHERYLVEVHFKTPVIMTDYPKEIKSFYMKLNDDGKTVRGMDVLFPKIGEI 393

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    + ++   + +G+ ++ +         + + G  PH G   G +R+++ + 
Sbjct: 394 IGGSEREADYDKLVARANEMGVPEKDIW----WYLDSRRYGTAPHSGFGLGFERLLLFVT 449

Query: 552 GAKNVREVSLFPMSQN 567
           G  N+R+V  FP + N
Sbjct: 450 GMSNIRDVIPFPRTPN 465


>gi|74139282|dbj|BAE38517.1| unnamed protein product [Mus musculus]
          Length = 501

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 91/379 (24%), Positives = 151/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL V      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +   PE    
Sbjct: 110 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+   + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCFCADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNFL-----------R 276
           F  LD+EM+F        ++I +T+  + +G+ E F +   TVS  F            R
Sbjct: 286 FVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    +  + +    ++F V  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF             D  + K +  YD+   G EI SG  R H  +++ +   
Sbjct: 393 KYPLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERAL 443

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           + GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP      
Sbjct: 444 HHGIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRL 499

Query: 570 DL 571
             
Sbjct: 500 TP 501


>gi|260655067|ref|ZP_05860555.1| lysine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260630178|gb|EEX48372.1| lysine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 507

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 122/360 (33%), Gaps = 36/360 (10%)

Query: 6   THSC-------GDLGVSDVGSFVRL--SGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           TH+        G L          L  +G V  +R  G + F  ++D  G  Q+    ++
Sbjct: 42  THTAQAVAETYGALEPEQADESAALSMAGRVMTIRRQGKLAFAHLQDETGTIQIYFQLNA 101

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +  +  +        G ++             G++ ++ +  ++LS A   PLP   
Sbjct: 102 LGEKEYEFFKKW---IDTGDIIGLCGHPFRTK--RGELTVAVKSFQLLSKALR-PLPEKW 155

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSP 174
                  +R++ R++DL     +     +R  II S R  + +   +E  TP+L+  +  
Sbjct: 156 HGLSDMEVRYRKRYVDLIANPEVRDVFRRRAAIITSFRSTLESHGTLEVETPVLSYLAGG 215

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+          Y L  A + + + L+     R ++I   FR+E       P EF
Sbjct: 216 ANARPFITHHNALDMDMY-LRIAVELFHKRLVVGMMGRVYEIGKNFRNEGMDLMHNP-EF 273

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
             +++   + + + ++N  E ++R                       A   +     D  
Sbjct: 274 TMMEVYWPYCDYEVMMNLTEELIRNAA--------------VASNGKAKIEWQGTSLDFE 319

Query: 295 NPI---IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           +P     M  + +     +F   +   +                  +   + M E+   Q
Sbjct: 320 SPFRRASMVELVKEHTGVDFSSLTDEEARKEAASRGLEVKPTDSRFKILTEFMEEFVEDQ 379



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 74/209 (35%), Gaps = 20/209 (9%)

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           +    +   G      +     ++   +    G     +  +         +AR   A  
Sbjct: 304 NGKAKIEWQGTSLDFESPFRRASMVELVKEHTGVDFSSLTDE---------EARKEAASR 354

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEE--KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
              +      F  + +F   E+ E++  +      +P  +     +     D       +
Sbjct: 355 GLEVKPTDSRFKILTEF-MEEFVEDQLIQPTFVTGHPVEISPLAKKDPLNPD----YTHR 409

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN----RFGGLYRAFQCGMPPHG 537
           ++L C G E+A+G    +        F +    K   E+           A + G+PP G
Sbjct: 410 FELFCCGKELANGYSELNDPVDQKARFIDQMKKKSEGEDETHPYDADFVEALEQGLPPTG 469

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+  G+DR++M L  +K++R+V  FP  +
Sbjct: 470 GLGIGMDRVIMFLTNSKSIRDVIFFPTMK 498


>gi|258647028|ref|ZP_05734497.1| lysine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260404469|gb|EEW98016.1| lysine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 497

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 74/330 (22%), Positives = 133/330 (40%), Gaps = 31/330 (9%)

Query: 6   THSCGDLGV-----SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           TH   D+          G  V+++G +  +R HG   F  +RD  G  Q+    D+    
Sbjct: 34  THHSEDIHANAAAFEASGEHVKVAGRIMIIRGHGKTAFCTLRDEKGDIQLYFRKDTVSEN 93

Query: 61  ---IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
              + K V    +L ++G V             TG+  +      +LS +   PLP    
Sbjct: 94  EWNLFKLVDMGDILGVEGTV---------FTTHTGETTIRVLHFTMLSKSLR-PLPEKWH 143

Query: 118 REYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
               +  R++ R+LDL     + K  +KR  ++ ++R    A  F+E  TP+L       
Sbjct: 144 GLTDKEQRYRQRYLDLIANPDVRKTFIKRANMLQAIRNWYTAHGFLEVETPVLQPLYGGA 203

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+        + Y L  AP+ Y + L+  G++R F+I   FR+E   +   P EF 
Sbjct: 204 NARPFMTHFNALDMTMY-LRIAPELYLKRLLVGGYERIFEITRNFRNEGMDTRHNP-EFT 261

Query: 236 QLDMEMSFVEQDDILNTMENVLRGV---------FEEFSNGNTVSNNFLRICYDDAIRRY 286
            ++   ++ + DD+++  E ++            F        V+  + R+   +A+++Y
Sbjct: 262 AIETYQAYGDIDDVIDQTEQIVAACAMASYGTTKFTYEGTEIDVAGPWPRLTMAEAVKKY 321

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
             +  D    I         +H E+  F  
Sbjct: 322 TGEDFDACKTIEEARAICDRLHVEYGEFDG 351



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 13/131 (9%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMS----- 501
           EE  I   H   T     +  L   D    +   +++    G E+A+G    +       
Sbjct: 365 EEHLIQPVH--ITEHPIEVSPLSKLDPKDPRYTIRFESYIYGRELANGFSELNDPLDQRA 422

Query: 502 --EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             E+ ++   +       ++  F     A + GMPP GG+  G+DR+ ML+  + ++R++
Sbjct: 423 RFEMQVEEREHGDDEAHPIDEDF---LTALEYGMPPTGGLGIGLDRLFMLMTNSSSIRDI 479

Query: 560 SLFPMSQNFCD 570
            LFP  +   D
Sbjct: 480 LLFPAMRPETD 490


>gi|225561216|gb|EEH09497.1| lysyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 609

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/353 (17%), Positives = 132/353 (37%), Gaps = 20/353 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV-----VANP 54
           + +Y +   GD         +R++G ++  R  G  +IF DIR      QV         
Sbjct: 111 IKQYESLQKGD---QVKDKELRIAGRIYTKRSAGAKLIFYDIRAEGVKIQVACQAQNVKG 167

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    +  + +R   ++ I G        T   N   G++ + A ++ +L+      +P 
Sbjct: 168 DIPFEDQHEHLRRGDIVGIVGF----PGRTAPKNRADGELSIFATEVVLLAPCL-HQIPS 222

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                  +  R++ R+LDL  +   +N  V R+++I+ +R      +F+E  TP++   +
Sbjct: 223 EHYGLRDQEQRYRQRYLDLIMNDRSRNVFVTRSKMISYIRRFFDERDFVEVETPMMNTIA 282

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                   +    +      L  AP+ Y ++L+  G +R +++   FR+E       P E
Sbjct: 283 GGATAKPFITHHNDLNMDMFLRVAPELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-E 341

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F   +   ++ +  DI+N  E ++ G+ +  + G      F     ++    +      +
Sbjct: 342 FTTCEFYWAYADVYDIMNVTEELVSGLVKHITGG--YETTFHTQTGEEFKVNWKAPWKRI 399

Query: 294 RNPIIMHNVT--EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                +   T  +     +         +    +   I       N    D++
Sbjct: 400 EMIPALEEATGEKFPPGDQLHTMETNEFLKKILKKVNIECTPPETNARMLDKL 452



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 4/95 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++      EI +     +        F      K   ++           + + G
Sbjct: 486 GLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQASQKAQGDDEAQLIDENFCTSLEFG 545

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 546 LPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 580


>gi|282890093|ref|ZP_06298625.1| hypothetical protein pah_c012o020 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500021|gb|EFB42308.1| hypothetical protein pah_c012o020 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 465

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 78/383 (20%), Positives = 135/383 (35%), Gaps = 51/383 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEW 69
             S VGS V + GWV  VR      F++I D   ++  QVVANPD   +E   + + +  
Sbjct: 13  RPSPVGSDVTIKGWVRTVRNQKTFTFIEINDGSTLSNFQVVANPDLPNYERTMQELSTGV 72

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + I G V+    +  +       +EL A++++I+   +    P+  +R   E +R    
Sbjct: 73  SVAIQGTVVESPGKNQS-------LELVAKEVKIIGPCDPETYPLQKKRHSYEFLR-TIA 124

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L  R +TL      R  +  +       + F+   TPI+T+S  EGA      S ++  
Sbjct: 125 HLRPRTNTLGAVARIRNALSFATHLFFQKKGFLYIHTPIITSSDCEGAGKMFRVSTLDPD 184

Query: 190 --------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                          F+  P       Q +  + AS     +   P FR E+  + R   
Sbjct: 185 ALPRTKEGKVDYSKDFFEKPTYLTVSGQLEGEIYASALSDIYTFGPTFRAENSNTSRHLA 244

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS--------------------- 271
           EF+ ++ EM+F + +D ++  E  L+   +                              
Sbjct: 245 EFWMIEPEMAFADINDDMDCAEEYLKYTVKYVLEHCEEDIDFFNQYVSPGLRERLEHIVN 304

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHN--VTEHFVHSEFRVFSKILSVNPGYEVWAI 329
             F R  Y  A+R           P+   +   +EH        FSK + +    +    
Sbjct: 305 TPFERASYSYAVRILEKANKPFEYPVKWGSDLQSEHERFLAEEYFSKPVIITDYPKEIKS 364

Query: 330 PAKGGGGNRAFCDRMNEWARSQG 352
                  +      M+      G
Sbjct: 365 FYMRLNDDEKTVAAMDVLVPRIG 387



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 34/93 (36%), Gaps = 4/93 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    EI  G  R    + + Q      +     E  +       + 
Sbjct: 370 NDDEKTVAAMDVLVPRIGEIIGGSQREDRLDYLKQRLIENNLK----EEDYWWYLDLRKY 425

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G  PH G   G +R+V  + G +N+R+   FP 
Sbjct: 426 GSVPHAGFGLGFERLVQFVTGIENIRDAIPFPR 458


>gi|19074136|ref|NP_584742.1| LYSYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74621262|sp|Q8SS56|SYKC_ENCCU RecName: Full=Probable lysyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|19068778|emb|CAD25246.1| LYSYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 440

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 90/546 (16%), Positives = 162/546 (29%), Gaps = 115/546 (21%)

Query: 28  HRVRPHGGIIFLDIR-DHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETIN 86
             +R H    F  +  +   +  VV   ++   ++AK +R   V+   G           
Sbjct: 1   MSMRLHARFCFFVVTSNGESLQVVVDTKEAGREQMAKFLRRGDVVGFTG---------NP 51

Query: 87  ANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKR 145
               T +  + A  I +L+      +P            ++ R++DL           KR
Sbjct: 52  GRTRTLEASVFATDIIVLTPCLR-TIPTEHFGLKDPETIYRKRYMDLLINRESRNRFQKR 110

Query: 146 TRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
            +II  +R  + +  F+E  TP++        A+ F+      +   Y +  +P+ Y + 
Sbjct: 111 AQIIGYIRSFLDSRGFLEVETPMMNLIPGGAAAKPFITHHNELKLDLY-MRVSPELYLKK 169

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           L+  G +R ++I   FR+E       P EF   +  M+                     +
Sbjct: 170 LVVGGLERVYEIGKQFRNEGIDLTHNP-EFTSCEFYMA---------------------Y 207

Query: 265 SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
           ++ N +      +        +GTD   + +P      TE    S  R F  I  +    
Sbjct: 208 ADYNDLMEMTEELISGMVENMFGTDTI-VYSPKKREERTESVELSFKRPFRVISILEELN 266

Query: 325 EVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
               +   G   +R                                              
Sbjct: 267 ARLGLDLSGETLDR------------------------------------------EETL 284

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYE 444
           E +         D        P            H+      I   C    ++ D     
Sbjct: 285 EKLLSAC-----DKEGLSVEKPRTLSRVLDKLIGHV------IEPQCVNPTFVKD----- 328

Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
                       +P  M        K +   +    +++L  N  EI +     +     
Sbjct: 329 ------------HPIAMSPLA----KNHRSKAGLTERFELFINCKEICNAYTELNNPFEQ 372

Query: 505 LQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            + F          ++           A + G+PP GG   GIDR+VM L  A N+R+V 
Sbjct: 373 RERFLQQTQDLNAGDDEAMMNDEDFCTALEYGLPPTGGWGIGIDRLVMYLTDAANIRDVI 432

Query: 561 LFPMSQ 566
            FP  +
Sbjct: 433 FFPTMK 438


>gi|315037519|ref|YP_004031087.1| lysyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312275652|gb|ADQ58292.1| lysyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|327182815|gb|AEA31262.1| lysyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 516

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/301 (20%), Positives = 118/301 (39%), Gaps = 18/301 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +++G +   R  G + F D+ D  G  Q+    D    +  K  +   +    G  +   
Sbjct: 62  KIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDI----GDFLGID 117

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E +     TG++ + A  +  LS A   PLP            ++ R+LDL  +     
Sbjct: 118 GEVM--KTDTGELTIRALHVTFLSKALR-PLPDKYHGLKDVEAIYRQRYLDLITNRDSYM 174

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
               RT+II ++R  +  +NF+E  TP+L        AR F+        + Y +  A +
Sbjct: 175 RFVHRTQIIQAIRDYLNGQNFLEVETPVLHNIPGGAEARPFITHHNALDINLY-MRIALE 233

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  E ++R 
Sbjct: 234 LPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELESYAAYWDYHDVMDEAEGIIRA 292

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRNPIIMHNVTEHFVHSEFR 312
             +  S+   ++     I      RR             D   P+ +   T+     +  
Sbjct: 293 AAKVVSDDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVDFWKPMTLEEATKIAEDHDIH 352

Query: 313 V 313
           V
Sbjct: 353 V 353



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 113/348 (32%), Gaps = 26/348 (7%)

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGV-FEEF-----SNGNTVSNNFLRICYDDA 282
           R        D  M FV +  I+  + + L G  F E       N    +     I + +A
Sbjct: 162 RYLDLITNRDSYMRFVHRTQIIQAIRDYLNGQNFLEVETPVLHNIPGGAEARPFITHHNA 221

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +      +  L  P+    V +     E     +   ++  +       +       + D
Sbjct: 222 LDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNPEFTELESYAAYWDYHD 281

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            M+E                + + G +   G             +   +  + G   +  
Sbjct: 282 VMDEAEGIIRAAAKV-----VSDDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVDFW-- 334

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
              P+            IA++  I     ++   I++  F+E   EE  +D         
Sbjct: 335 --KPMTLEEA-----TKIAEDHDIHVEKFWKVGHIINA-FFEKYCEETIVDPTFVYGHPV 386

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           +    + K  D       ++++   G E  +     +  +   + F      +E   +  
Sbjct: 387 EISPLAKKNAD-DPRFTDRFEIYIMGEEYGNAFSELNDPDDQRERFEAQMEEREAGNDEA 445

Query: 523 G----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                   RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 446 DMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 493


>gi|188995021|ref|YP_001929273.1| lysyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|238691484|sp|B2RJY1|SYK_PORG3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|188594701|dbj|BAG33676.1| lysyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 578

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 65/335 (19%), Positives = 121/335 (36%), Gaps = 24/335 (7%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F++++D  G  Q+    D  C    K   +  V     +  
Sbjct: 55  RQVSIAGRIMSRRIMGKATFMELQDAEGRIQIYITRDDICPGEDKEFYNTVVKKCTDIGD 114

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFKYRFLD 132
               +        G+I +  Q++  LS A      V  +             R++ R++D
Sbjct: 115 FIGVKGYVFRTQMGEISVHVQEMTFLSKAIRPLPVVKEKDGEVFDGFTDSEQRYRQRYVD 174

Query: 133 LRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  ++  K+I  KRT + NSMR       +IE  TP+L +      AR F+         
Sbjct: 175 LVVNSHVKDIFLKRTMVFNSMRSFFNERGYIEVDTPVLQSIPGGAAARPFITHHNALDIP 234

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ + + ++
Sbjct: 235 LY-LRIANELYLKRLIVGGFDGVYEFSRNFRNEGMDRTHNP-EFTAMEIYVAYKDYNWMM 292

Query: 251 NTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           N  E +L  +  +                   + R+   +AI  +        N   +  
Sbjct: 293 NFTEQMLERICMDVLGTTQVKVGEKLIDFKAPYRRVTMIEAIHEHTGIDISGMNEAELRQ 352

Query: 302 V-----TEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           V      EH            +      + +  P 
Sbjct: 353 VCDKLGVEHNETMGKGKLIDEIFGEKCEKNYIQPT 387



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 76/215 (35%), Gaps = 45/215 (20%)

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC--------NCFEFC 435
            EAI     +   D       +  + C       N    +  +I+         N  +  
Sbjct: 331 IEAIHEHTGI---DISGMNEAELRQVCDKLGVEHNETMGKGKLIDEIFGEKCEKNYIQPT 387

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           +I D+P     +E   +   H                +       +++L+ NG E+A+  
Sbjct: 388 FITDYP-----KEMSPLTKEHR--------------TNPE--LTERFELMVNGKELANAY 426

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
              +      + F       E  ++          RA + GMPP  G+  G+DR+VMLL 
Sbjct: 427 SELNDPIDQRERFEEQLKLSEKGDDEAMYIDNDFIRALEYGMPPTSGMGIGMDRLVMLLT 486

Query: 552 GAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           G ++++EV LFP  +         P  V+    +E
Sbjct: 487 GQESIQEVLLFPQMK---------PEKVAPRDTKE 512


>gi|116628954|ref|YP_814126.1| lysyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|311111241|ref|ZP_07712638.1| lysine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|116094536|gb|ABJ59688.1| Lysyl-tRNA synthetase (class II) [Lactobacillus gasseri ATCC 33323]
 gi|311066395|gb|EFQ46735.1| lysine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 504

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 71/383 (18%), Positives = 138/383 (36%), Gaps = 30/383 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L         +++G +   R  G + F D+ D  G  Q+    D    + 
Sbjct: 44  EKYSKEDKDELNADMP--TTKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDN 101

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  +   +    G  +    E +     TG++ + A  +  LS A   PLP   +    
Sbjct: 102 YKIFKKSDI----GDFLGIDGEVM--KTDTGELTIRATHVTFLSKALR-PLPNKWDGLKD 154

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
               ++ R+LDL  +         RT+II ++R  +  ++F+E  TP+L        AR 
Sbjct: 155 VEQIYRQRYLDLITNHESYMRFVHRTQIIQAIRNYLNKQDFLEVETPVLHNIPGGAEARP 214

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  A +   + L+  G +R ++I   FR+E   +   P EF +L+ 
Sbjct: 215 FITHHNALDIDLY-MRIALELPLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTELET 272

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  D+++  E ++R   +                 D  I   GTD  DL  P   
Sbjct: 273 YAAYWDFHDVMDEAEEIIRAAAKVV-------------SPDGKINYQGTD-IDLGKPFRR 318

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++ +         F K ++     ++                 +N +     +  +   
Sbjct: 319 VHMVDLIKEKTGVDFWKEMTDEEAKKIAEEHGIHTEPFWKVGHVINAFFDEFCEKTIVDP 378

Query: 360 FWRLDESGNVAGMGPVAKHLNIV 382
            +     G+   + P+AK     
Sbjct: 379 TFVY---GHPVEISPLAKKNADD 398



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 10/154 (6%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEE--KKIDFAHNPFTMPQGGMESLKGNDLLS 476
            IA+E GI     ++   +++  F E+ E+          +P  +    +     +D   
Sbjct: 344 KIAEEHGIHTEPFWKVGHVINAFFDEFCEKTIVDPTFVYGHPVEISP--LAKKNADDPR- 400

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCG 532
               ++++   G E  +     +        F      +E   +          RA + G
Sbjct: 401 -FTDRFEIFILGMEYGNAFSELNDPVDQRHRFEEQMEEREAGNDEADMIDEDYIRAMEFG 459

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 493


>gi|171186429|ref|YP_001795348.1| aspartyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170935641|gb|ACB40902.1| aspartyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 429

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 69/271 (25%), Positives = 126/271 (46%), Gaps = 14/271 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+  +TH   ++     G  V L GWV  +R  G + F+ +RD  G  Q+         +
Sbjct: 1   MYPRKTHWTSEITPELHGKEVVLGGWVWELRDLGKVKFIVLRDREGFVQLTLKAGKTPEQ 60

Query: 61  IAK---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           + K    +  E V+ + G+V +       + I    +E+    + +L+ A+ LPL ++ +
Sbjct: 61  VLKLFSELNREDVIVVRGVVEA-------SKIAKRGVEVFPTDLWVLNKAKPLPLDIWSD 113

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                + R ++R +DL+R          + ++  +R  +  E F+E  TP +  +S EG 
Sbjct: 114 TP-DLATRLRWRSVDLKRPRNLAVFTLSSEVLKEIRQVLYGERFVEVFTPKIIVTSTEGG 172

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +        + ++  L Q+PQ YK+ L AS  +R F+I P +R E   +D    EF  +
Sbjct: 173 AELFPVLYFERVAY--LSQSPQLYKEQLTAS-LERVFEIGPAYRAEKHNTDYHLNEFISV 229

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           D E +F+   D+++ +E + R VF   S   
Sbjct: 230 DAEAAFMSYQDVMDVLEKITRRVFTAVSKHE 260



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 4/94 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           K+  YDL+ NG E+ASG  R H  + + +     G+  ++    F      F  GMPPH 
Sbjct: 340 KSESYDLIINGIEVASGATRIHRRDELEEEMRKRGLDPKL----FESHLAVFDYGMPPHA 395

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   G +R++  +L   NVR   L+P  +   + 
Sbjct: 396 GFGLGFNRLITAVLNLDNVRHAVLYPRDRYRVEP 429


>gi|330996051|ref|ZP_08319945.1| asparagine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329574048|gb|EGG55626.1| asparagine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 467

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 57/288 (19%), Positives = 99/288 (34%), Gaps = 24/288 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R      L   D GS V + GWV   R    + F+ + D   I  V    D+  F+    
Sbjct: 6   RIKIIDVLKREDYGSEVNVKGWVRTRRGSKSVHFIALNDGSTINNVQIVADADKFD---- 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
                 L   G  +S + E + +      +E+ A++IE+L             +      
Sbjct: 62  -DELIKLITTGACLSVTGELVQSVGSGQAVEIRAREIEVLGTCGSDYPMQKKGQ--SMEY 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              +  + LR +T       R  +  ++        F    TPI+TAS  EGA      +
Sbjct: 119 MRTHAHMRLRTNTFGAVFRIRHNMAMAVHRYFHEHGFFYFHTPIITASDCEGAGQMFQVT 178

Query: 185 RVNQ--------------GSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
             N                 F+    +     Q +  L A+     +   P FR E+  +
Sbjct: 179 TKNLYDLKKDDEGKIDYSDDFFGKTTSLTVSGQLEGELGATALGAIYTFGPTFRAENSNT 238

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            R   EF+ ++ E++F +  D ++  E+ ++               FL
Sbjct: 239 PRHLAEFWMIEPEVAFNDIHDNMDLAEDFIKYCVRWALEHCQDDLAFL 286



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L     EI  G  R    + ++     + I  + +           + G  PH G   G 
Sbjct: 384 LFPQIGEIIGGSEREENYDKLMARIEELNIPMKDMW----WYLDTRRFGTCPHSGFGLGF 439

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+++ + G +N+R+V  FP +  
Sbjct: 440 ERLILFVTGMQNIRDVIPFPRTPK 463


>gi|229102819|ref|ZP_04233515.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228680604|gb|EEL34785.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 432

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 71/273 (26%), Positives = 124/273 (45%), Gaps = 15/273 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M +  T S        VG  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 1   MDQIMTRSLAQACTEHVGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ I G ++  S   +        +E+ A ++++L+ AE+LP  +  ++  
Sbjct: 60  ---KVDVESVVQIVGEIVETSKTEL-------GVEVLAHEVKVLNGAEQLPFELNKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        +  +  S    +   +FI   TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKATLAQSFSDYLTENDFIRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVS 271
           E+ F+ +  +++    +VLR +F++        
Sbjct: 228 ELGFIDDFHEVMQLETDVLRYMFQQVGETCEKE 260



 Score =  107 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 63/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     ++  
Sbjct: 297 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTMPNKENPTITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  +++L +F   G+       +F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYDLLLASFKEKGLHL----EKFQSYLNTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 426


>gi|187251209|ref|YP_001875691.1| asparaginyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186971369|gb|ACC98354.1| Asparaginyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 431

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 79/378 (20%), Positives = 145/378 (38%), Gaps = 53/378 (14%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVL 71
             +GS V L+GWV+ +R  G + F+ +RD  GI Q V    N     F+ A ++  E  +
Sbjct: 12  EYLGSEVTLNGWVYNMRSSGKLHFIQLRDGSGIIQCVIFKGNVTPEVFDTAANLTQETSV 71

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G V   +   +         EL  + I+I++ + + P+      +         R L
Sbjct: 72  SITGTVKEDNRSKL-------GFELDVKDIKIIAPSVDYPITPKEHGDA---FLMHNRHL 121

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR       +  R  II ++R       F    +PILT ++ EG           + +F
Sbjct: 122 WLRSSKQTAILKIRDEIIFAIRKFFHEREFTLVDSPILTPAACEGRSTLFETEYFGEKAF 181

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E++F + +D + 
Sbjct: 182 --LSQSGQLYGEAA-AMALGKIYCFGPTFRAEKSKTRRHLTEFWMVEPEVAFNDLNDNME 238

Query: 252 TMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRR---------YG 287
             E+ +  + E               + S    +   F R+ Y +AI+          +G
Sbjct: 239 LAEDFIVYIVESVLKNRRAELELIGRDISKLENIKKPFPRVSYTEAIKILNDLGNPTEWG 298

Query: 288 TDK---------PDLRNPIIMHN----VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
            D               P+I+H     +   ++  +      +L+++      A    GG
Sbjct: 299 GDIGGDEETLISNKFDRPVIIHRYPAAIKAFYMKRDPEDPKVVLAMDVIGPEGAGEIIGG 358

Query: 335 GGNRAFCDRMNEWARSQG 352
               +  + + E  + QG
Sbjct: 359 SERESDYNALVERMKEQG 376



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 14/117 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAF 508
           +   A   F M +         D   + A   D++      EI  G  R      +++  
Sbjct: 321 RYPAAIKAFYMKRD------PEDPKVVLAM--DVIGPEGAGEIIGGSERESDYNALVERM 372

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
              G++ E ++          + G  PH G   GI+R+V  + G  +VRE   F   
Sbjct: 373 KEQGMAPEDMD----WYLDLRKYGSVPHSGFGMGIERMVRWICGLHHVRETIPFARM 425


>gi|238853553|ref|ZP_04643925.1| lysine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282852632|ref|ZP_06261974.1| lysine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|238833849|gb|EEQ26114.1| lysine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282556374|gb|EFB61994.1| lysine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 513

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 71/383 (18%), Positives = 138/383 (36%), Gaps = 30/383 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y      +L         +++G +   R  G + F D+ D  G  Q+    D    + 
Sbjct: 44  EKYSKEDKDELNADMP--TTKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDN 101

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K  +   +    G  +    E +     TG++ + A  +  LS A   PLP   +    
Sbjct: 102 YKIFKKSDI----GDFLGIDGEVM--KTDTGELTIRATHVTFLSKALR-PLPNKWDGLKD 154

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
               ++ R+LDL  +         RT+II ++R  +  ++F+E  TP+L        AR 
Sbjct: 155 VEQIYRQRYLDLITNHESYMRFVHRTQIIQAIRNYLNKQDFLEVETPVLHNIPGGAEARP 214

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  A +   + L+  G +R ++I   FR+E   +   P EF +L+ 
Sbjct: 215 FITHHNALDIDLY-MRIALELPLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTELET 272

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  D+++  E ++R   +                 D  I   GTD  DL  P   
Sbjct: 273 YAAYWDFHDVMDEAEEIIRAAAKVV-------------SPDGKINYQGTD-IDLGKPFRR 318

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            ++ +         F K ++     ++                 +N +     +  +   
Sbjct: 319 VHMVDLIKEKTGVDFWKEMTDEEAKKIAEEHGIHTEPFWKVGHVINAFFDEFCEKTIVDP 378

Query: 360 FWRLDESGNVAGMGPVAKHLNIV 382
            +     G+   + P+AK     
Sbjct: 379 TFVY---GHPVEISPLAKKNADD 398



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 10/154 (6%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEE--KKIDFAHNPFTMPQGGMESLKGNDLLS 476
            IA+E GI     ++   +++  F E+ E+          +P  +    +     +D   
Sbjct: 344 KIAEEHGIHTEPFWKVGHVINAFFDEFCEKTIVDPTFVYGHPVEISP--LAKKNADDPR- 400

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCG 532
               ++++   G E  +     +        F      +E   +          RA + G
Sbjct: 401 -FTDRFEIFILGMEYGNAFSELNDPVDQRHRFEEQMEEREAGNDEADMIDEDYIRAMEFG 459

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 493


>gi|254383488|ref|ZP_04998839.1| lysyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194342384|gb|EDX23350.1| lysyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 1100

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/265 (23%), Positives = 109/265 (41%), Gaps = 18/265 (6%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTH+   L  +          G  V L+G V  VR  GG++F  +RD  G TQ++   D 
Sbjct: 637 RTHTVAQLKAAHPGHPPGARTGEEVTLAGRVMVVRDLGGVVFAVLRDWSGDTQLMLTRDE 696

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           A   +  S      +     V++R     +    +G++ L  +  ++       PLP   
Sbjct: 697 AGVGVLDSFT--SQVDFGDHVLARGEVGAS---RSGELSLVVRSWQLTGKCLR-PLPDKR 750

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL         +  R+  + ++R  ++   ++E  TP+L      
Sbjct: 751 KGLADPEARVRRRYLDLVASPEARDVVRARSAAVQALRQGLLDRGYLEVETPMLQQIHGG 810

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F           Y L  AP+ Y + L   G ++ F++   FR+E       P EF
Sbjct: 811 ANARPFRTHINAYDLDLY-LRIAPELYLKRLCVGGMEKVFEMGRTFRNEGVSYKHNP-EF 868

Query: 235 YQLDMEMSFVEQDDILNTMENVLRG 259
             L+   +F + D +L+    +++G
Sbjct: 869 TMLEAYQAFADYDVMLDLTRELIQG 893



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 66/209 (31%), Gaps = 33/209 (15%)

Query: 368  NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF----CSFAADARNHIAQE 423
            +++G+ PV K +     EA+   +D    +       D             D    + + 
Sbjct: 917  DISGIWPV-KTMYGAIGEALGEEVDADTAEPVLRRLCDRAGVPHGPEDTRGDVVLEMYER 975

Query: 424  LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
            L  +        +  DFP               +P T        L         A ++D
Sbjct: 976  L--VEERTKLPTFYKDFP------------TDVSPLTRQHRRDPRL---------AERWD 1012

Query: 484  LVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGI 539
            LV  G E+ +            +  +   +                  A +  MPP GG+
Sbjct: 1013 LVAFGTELGTAYSELTDPVEQRRRLTAQSLLAAGGDPEAMELDNDFLDALEYAMPPTGGL 1072

Query: 540  AAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
              G+DR+VM L G   +RE   FP+ +  
Sbjct: 1073 GIGVDRLVMFLTGL-TIRETLPFPLVRRG 1100


>gi|189461542|ref|ZP_03010327.1| hypothetical protein BACCOP_02201 [Bacteroides coprocola DSM 17136]
 gi|189431748|gb|EDV00733.1| hypothetical protein BACCOP_02201 [Bacteroides coprocola DSM 17136]
          Length = 467

 Score =  188 bits (478), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 57/290 (19%), Positives = 107/290 (36%), Gaps = 28/290 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F  E+ 
Sbjct: 6   RTKIVDLLKCRDFGTMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQVVVDLANFDEELL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K + +   + ++G ++        A       E+ A++IE+L   +        ++ +  
Sbjct: 66  KQITTGACISVNGELVESVGSGQAA-------EIQAREIEVLGTCDNTYPLQ--KKGHSM 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
               +   L  R +T       R  +  ++        F    TP++TAS  EGA     
Sbjct: 117 EFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPLITASDCEGAGQMFQ 176

Query: 183 PSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDP 225
            + +N                 F+    +     Q +  L A+     +   P FR E+ 
Sbjct: 177 VTTMNLYDLKKDENGSIIYDNDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRAENS 236

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + R   EF+ ++ E++F + +D ++  E  ++   +   +       FL
Sbjct: 237 NTPRHLAEFWMIEPEVAFNDINDNMDLAEEFIKYCVQWALDNCYDDVKFL 286



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P     +E K        F M Q         D  +++A  
Sbjct: 342 HERYLVEEHFKRPVILTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 382

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R    + +L     + I  + +           + G  PH G   
Sbjct: 383 V-LFPKIGEIIGGSEREADYDKLLTRIQELNIPMKDMW----WYLDTRKYGSCPHSGFGL 437

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G  N+R+V  FP +  
Sbjct: 438 GFERLLLFVTGMANIRDVIPFPRTPR 463


>gi|300728330|ref|ZP_07061695.1| asparagine--tRNA ligase [Prevotella bryantii B14]
 gi|299774395|gb|EFI71022.1| asparagine--tRNA ligase [Prevotella bryantii B14]
          Length = 337

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 118/290 (40%), Gaps = 26/290 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE 60
             RT     L  +D G+ + + GWV   R    + F+ + D   I   Q+V +P +   +
Sbjct: 1   MKRTKVVDALQSTDFGNEILVKGWVRSHRSSKAVDFIALNDGSTIKNIQIVVDPSTIEAD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             KS+ +   + + G ++        +       E+ +++IEI  +      P+  + + 
Sbjct: 61  KLKSITTGACIGVVGTLVESQGAGQTS-------EVQSKEIEIYGLC-PNDYPMQKKGQS 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +Y  + LR +T    +  R  +  ++        F    TP++TAS  EGA + 
Sbjct: 113 FEYMR-QYAHMRLRTNTFGAVMRIRHNMAIAVHKYFHEHGFYYFHTPLITASDAEGAGEM 171

Query: 181 LVPSRVNQG------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
              + ++               F+          Q +  L A+     +   P FR E+ 
Sbjct: 172 FQVTTLDLDRVAKEGKVEYSKDFFGKKTNLTVSGQLEGELGATALGAIYTFGPTFRAENS 231

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + R   EF+ ++ E++F+++D++++  E+ ++       +       FL
Sbjct: 232 NTPRHLAEFWMIEPEVAFMDKDELMDLEEDFIKYCVRWALDNCKDDLEFL 281


>gi|91218337|ref|ZP_01255281.1| lysyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91183475|gb|EAS69874.1| lysyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 563

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 66/347 (19%), Positives = 136/347 (39%), Gaps = 27/347 (7%)

Query: 6   THSCGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           TH+   +  + + G  V ++G +   R  G   F +++D  G  QV  N D  C    K+
Sbjct: 33  THTSTQVKENFEEGKKVVVAGRLMSRRIQGKASFAELQDGEGRVQVYFNRDEICTGEDKT 92

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE-- 122
           + +E    +  +      E      + G+  +     ++LS + +       +RE  E  
Sbjct: 93  LYNEVYKKLLDIGDFIGIEGELFTTMVGEKTIKVLDFKLLSKSLKPLPLPKKDREGHEYD 152

Query: 123 -----SIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
                  R++ R++DL  +  +     KR+ +  +MR     + ++E  TPIL +     
Sbjct: 153 GFQDAEQRYRQRYVDLVVNPGVKDIFKKRSALFTAMRNFFNEKGYMEVETPILQSIPGGA 212

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+          Y L  A + Y + L+  GFD  ++ +  FR+E       P EF 
Sbjct: 213 AARPFITHHNALDIPLY-LRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFT 270

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------GNTVSNNFLRICYDDAIRRY 286
            +++ +S+ + + ++   EN+L     + +                 + R+    AI ++
Sbjct: 271 AMEIYVSYKDYNWMMEFTENLLEYCALQVNGTTKTMFKEHHVDFKAPYKRVTMTAAIIQF 330

Query: 287 ------GTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
                 G  + +LR   +  N+  +    + ++  +I       +  
Sbjct: 331 TGFDITGKSEEELRTAALEMNLEVNETMGKGKLIDEIFGEKCEGKFI 377



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 18/158 (11%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           P  M     E     DL      +++L+  G EIA+     +      + F +     + 
Sbjct: 386 PKEMSPLCKEHRDNPDL----TERFELMVCGKEIANAYSELNDPIEQRERFEDQMKLSQK 441

Query: 518 VENRF-----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ--NFCD 570
            ++           RA + GMPP  G+  G+DR++M L    +++EV  FP  +      
Sbjct: 442 GDDEATEFIDYDFLRALEYGMPPTSGLGIGMDRLIMFLTNNPSIQEVLFFPQMRPEKKKV 501

Query: 571 LLMGSPSTV-------SVEQLRELGLRIVENPKKILKI 601
            L      V       S + L E+  +   + KK  K 
Sbjct: 502 ELTEEEKVVIDLLKVTSPQALEEIKSKSELSNKKWDKA 539


>gi|87120695|ref|ZP_01076588.1| lysyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86163923|gb|EAQ65195.1| lysyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 499

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 63/309 (20%), Positives = 125/309 (40%), Gaps = 34/309 (11%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R     DL                  V ++G + R R      F+ ++D  G  Q   N 
Sbjct: 41  RDAYAEDLQKEFADKEKPELEALDHKVSIAGRIVRNRG----AFMLLQDMSGQIQAYVNR 96

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E+    ++  +  I G+      +        G + +  Q+  +L+ A   PLP 
Sbjct: 97  KALSPELLADQKTWDLGDIIGI------KGPVHKSGKGDLYVDMQEAVLLTKALR-PLPD 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TAS 172
             +       R++ R++DL  +   +     R++I++++R  +    F E  TP++ T  
Sbjct: 150 KHKGLADMETRYRQRYVDLIVNEESRKTFQMRSQIVSTIRRFLEDRRFTEVETPMMQTIP 209

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          + L  AP+ Y + L+  GF+R F+I   FR+E   +   P 
Sbjct: 210 GGASARPFVTHHNAMDMQMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP- 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283
           EF  ++   ++ +  D+++  E++LR V E+      V+           F+R+   ++I
Sbjct: 268 EFTMIEFYQAYADYKDLMDLTEDMLRDVAEKVLGTTKVTYQGSEYDFGAPFIRMTMVESI 327

Query: 284 RRYGTDKPD 292
             +  +  +
Sbjct: 328 LHFNPELTE 336



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 10/160 (6%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE--EKKIDFAHNPFTMPQGGMESLKG 471
            +A   +A++LGI      +  W +     E  EE  E K+D        P       + 
Sbjct: 342 LEAATEVAKKLGI----QVKPIWGLGKLQTEIFEETAESKLDQPTFITAYPAEVSPLARR 397

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYR 527
           ND       +++    G EIA+G    +  E     F+     K+  ++           
Sbjct: 398 NDDNPFITDRFEFFVGGREIANGFSELNDPEDQADRFNKQVAEKDAGDDEAMHFDADYIN 457

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           A + G+PP  G   GIDR+VML   A ++R+V LFP  + 
Sbjct: 458 ALEHGLPPTAGEGIGIDRLVMLFTDAPSIRDVILFPHMRR 497


>gi|332878089|ref|ZP_08445819.1| asparagine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332684051|gb|EGJ56918.1| asparagine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 470

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/288 (19%), Positives = 98/288 (34%), Gaps = 24/288 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R      L   D GS V + GWV   R    + F+ + D   I  V    D+  F+    
Sbjct: 9   RIKIIDVLKREDYGSEVNVKGWVRTRRGSKSVHFIALNDGSTINNVQVVADADKFD---- 64

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
                 L   G  +S + E + +      +E+ A+ IE+L             +      
Sbjct: 65  -DELIKLITTGACLSVTGELVQSVGSGQAVEIQARAIEVLGTCGSDYPMQKKGQ--SMEY 121

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              +  + LR +T       R  +  ++        F    TPI+T S  EGA      +
Sbjct: 122 MRTHAHMRLRTNTFGAVFRIRHHMAMAIHRYFHEHGFFYFHTPIITGSDCEGAGQMFQVT 181

Query: 185 RVNQ--------------GSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
             N                 F+    +     Q +  L A+     +   P FR E+  +
Sbjct: 182 TKNLYDLKKDDEGKIDYSDDFFGKTTSLTVSGQLEGELGATALGAIYTFGPTFRAENSNT 241

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            R   EF+ ++ E++F +  D ++  E+ ++       +       FL
Sbjct: 242 PRHLAEFWMIEPEVAFNDIRDNMDLAEDFIKYCVRWALDNCQDDLAFL 289



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L     EI  G  R    + ++     + I  + +           + G  PH G   G 
Sbjct: 387 LFPQIGEIIGGSEREENYDKLMARIEELNIPMKDMW----WYLDTRRFGTCPHSGFGLGF 442

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+++ + G +N+R+V  FP +  
Sbjct: 443 ERLILFVTGMQNIRDVIPFPRTPK 466


>gi|269123799|ref|YP_003306376.1| lysyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268315125|gb|ACZ01499.1| lysyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 496

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/268 (22%), Positives = 108/268 (40%), Gaps = 11/268 (4%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
              + +G +   R  G   F  I+D  G  Q+ A  D    E  ++ +        G+V 
Sbjct: 54  KEFKTAGRIMSYRRMGKNGFAHIQDPTGKIQIYAKKDEIGEEEYETFKRLATGDFVGVV- 112

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
                       TG++ + A  +EILS     PLP          +R++ R++DL     
Sbjct: 113 -----GKLFRTQTGELTIKASHLEILSK-NIRPLPDKFSGLQNIEMRYRQRYIDLVMNPE 166

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQ 196
           +   + KR  II   R  +  + F+E  TP+L  +     AR F+          Y L  
Sbjct: 167 VMDTMKKRFEIIRYFRTYLEKKGFLEVETPMLHPTLGGANARPFITHHNALDMDMY-LRI 225

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF++ F+I   FR+E       P EF  +++  ++ + +D+++  E++
Sbjct: 226 APELYLKRLLVGGFEKVFEINRNFRNEGVSIKHNP-EFTMMELYQAYADFNDMMDITEDL 284

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           +  +         +      +      R
Sbjct: 285 ISSLTYHLYGTYEIPYEDKTVNLAKPWR 312



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPP 535
            +++L   G E  +     +  +   + F     +KE  ++          RA + GMPP
Sbjct: 400 DRFELFITGREYGNAYSELNDPKDQKERFEEQVRAKENGDDEASEMDLDYIRALEYGMPP 459

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG+  GIDR+VMLL  + ++R+V +FP
Sbjct: 460 AGGLGIGIDRLVMLLTNSSSIRDVIMFP 487


>gi|261212225|ref|ZP_05926511.1| lysyl-tRNA synthetase (class II) [Vibrio sp. RC341]
 gi|260838833|gb|EEX65484.1| lysyl-tRNA synthetase (class II) [Vibrio sp. RC341]
          Length = 510

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 64/292 (21%), Positives = 132/292 (45%), Gaps = 25/292 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G V   R      FL I++  G  Q  A+ D     + + ++ ++    
Sbjct: 66  LEALNHVVSIAGRVMAKRGP----FLVIQETSGRIQAYASKD-----VQQELKDQYQGLD 116

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++        +    G + ++ ++ ++L+ A   PLP        + +R++ R++DL
Sbjct: 117 IGDIIGVQGALHKSG--KGDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 173

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  V R+++++++R  MI++ F+E  TP++        AR F+          
Sbjct: 174 IVNESSRNAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPM 233

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++
Sbjct: 234 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMD 291

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
             E +L  V  E     ++            + R+   +AI+ Y  +   ++
Sbjct: 292 LTEELLSSVALEVLGSTSMPYGEHTVEFGGKYARMSMVEAIKHYNPNHAQIQ 343



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 386 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 445

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +KE  ++           A + G+PP  G   GIDR+VMLL  +  +R+V LFP 
Sbjct: 446 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNSHTIRDVILFPA 505

Query: 565 SQ 566
            +
Sbjct: 506 MR 507


>gi|332653647|ref|ZP_08419391.1| asparagine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332516733|gb|EGJ46338.1| asparagine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 469

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 97/277 (35%), Gaps = 29/277 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCID 74
           G  V + GW   +R      F+++ D      +    D+   +  K +  + V   L + 
Sbjct: 23  GQTVTVCGWARTIRDMKTFGFIELNDGSCFKNLQIVMDANVLDNYKEIAGQNVGAALIVT 82

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V+               +E+ A  I +   +         ++ +        + L  R
Sbjct: 83  GTVVLTPG-------AKQPLEVKADTIAVEGPSAPDYPLQ--KKRHSVEFLRTIQHLRPR 133

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+   +++ C    + F+   TPI+TAS  EGA +    + ++       
Sbjct: 134 TNLFSAAFRVRSATAHAIHCFFQDQGFVYVHTPIITASDCEGAGEMFQVTTLDLENVPKN 193

Query: 190 ---------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+   A      Q      A  F   +   P FR E   + R   EF+ +
Sbjct: 194 EDGTVDYSKDFFGKRANLTVSGQLNCENFAMAFGNVYTFGPTFRAEKSNTQRHAAEFWMI 253

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           + EM+F + +D ++  E +++ V     +      NF
Sbjct: 254 EPEMAFADLNDYMDNAEAMIKYVIRYVLDKCPDEINF 290



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 47/133 (35%), Gaps = 24/133 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K        F M Q        ND     A    LV    E+ 
Sbjct: 355 RPVFVTDYP-----KEIK-------AFYMRQ--------NDDGKTVAAADCLVPGIGELI 394

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    E++      +G+  +             + G   H G   G +R+VM L G
Sbjct: 395 GGSQREERLELLENRIQELGMDPKDYW----WYCDLRRYGSCRHAGYGLGFERMVMYLTG 450

Query: 553 AKNVREVSLFPMS 565
             N+R+V L P +
Sbjct: 451 VNNIRDVELHPRT 463


>gi|229109657|ref|ZP_04239243.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228673698|gb|EEL28956.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock1-15]
          Length = 432

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 5   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++  
Sbjct: 60  ---KVDVESVVHVIGEIVETSKTEL-------GVEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +FI   TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFIRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TM      ++  
Sbjct: 297 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTMQNKENPAITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+       +F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYELLLASFKEKGLHP----EKFQSYLNTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|296328451|ref|ZP_06870972.1| lysine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296154417|gb|EFG95214.1| lysine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 493

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 60/314 (19%), Positives = 125/314 (39%), Gaps = 16/314 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + +G +  +R  G + F  I D  G  Q+    D    E    +     +   G ++   
Sbjct: 57  KTAGRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNV---GDIIGLE 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
            E    +  T ++ L  + I +L+      LP          IR++ R++DL  +  + +
Sbjct: 114 GELFITH--TEELTLRVKSIALLTK-NVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRE 170

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQ 199
             +KRT+II ++R  +    F+E  TPI+        A+ F+          + L  AP+
Sbjct: 171 TFIKRTKIIKAIRKYLDDRGFLEVETPIMHPILGGAAAKPFITHHNTLNIDLF-LRIAPE 229

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R + +   FR+E   +   P EF  +++  +  + +D+++  E ++  
Sbjct: 230 LYLKKLIVGGFERVYDLNRNFRNEGISTRHNP-EFTMVELYQAHADFNDMMDLCEGIISS 288

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP------DLRNPIIMHNVTEHFVHSEFRV 313
           V +E +    +  + +++   +  R +  D        D    +      +        V
Sbjct: 289 VCQEVNGTTDIEYDGVQLSLKNFNRVHMVDMIKEVTGVDFWKEMTFEEAKKLAKEHHVEV 348

Query: 314 FSKILSVNPGYEVW 327
              + SV      +
Sbjct: 349 ADHMNSVGHIINEF 362



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + +  D  +    +++L  N  E A+     +  
Sbjct: 362 FFEQKCEEKVIQPTFVYGHPVEISPLAKRNEDNPNF-TDRFELFINKREYANAFTELNDP 420

Query: 502 EVM-----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                    Q    +  ++E           A + G+PP GG+  GIDR+VMLL GA ++
Sbjct: 421 ADQRGRFEAQVEEAMRGNEEATPEIDESFVEALEYGLPPTGGMGIGIDRLVMLLTGAPSI 480

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 481 RDVILFPQMK 490


>gi|24372578|ref|NP_716620.1| lysyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|39932202|sp|Q8EI58|SYK_SHEON RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|24346596|gb|AAN54065.1|AE015543_5 lysyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 500

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 65/311 (20%), Positives = 129/311 (41%), Gaps = 35/311 (11%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   +L              +G    ++G +   R      FL I+D  G  Q  A  
Sbjct: 37  RTHKAAELQEKYGQNTKEELEALGFRTSIAGRIMAKRGP----FLVIQDVSGRIQAYAEK 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                     ++  +     G ++  + +   +    G + ++ ++ ++L+ A   PLP 
Sbjct: 93  GVQA-----DLKDRYQGLDIGDIIGVTGQLHLSG--KGDLYVNMEEYQLLTKALR-PLPE 144

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R++DL  +   +   V R++++ ++R  MI + F+E  TP++    
Sbjct: 145 KFHGLTDQETRYRQRYVDLIVNEESRQAFVMRSKVVAAIRNFMIKKEFMEVETPMMHVIP 204

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 205 GGASARPFITHHNALDMPMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNP 262

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  ++  M++ +  D+++  E +L  +  E      +            + R+   +AI
Sbjct: 263 EFTMMEFYMAYADYQDLMDLTEELLSSIAIELLGSAQMPYGEHTVDFGGPYARLSMLEAI 322

Query: 284 RRYGTDKPDLR 294
           ++Y  D   ++
Sbjct: 323 QKYNPDNATIQ 333



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 6/122 (4%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML 505
           E  +       F        S     ND       +++    G E+A+G    + ++   
Sbjct: 373 ETAEWQLMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVANGFSELNDAQDQD 432

Query: 506 QAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
             F     +K+  ++           A + G+PP  G   GIDR+VML      +R+V L
Sbjct: 433 SRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 562 FP 563
           FP
Sbjct: 493 FP 494


>gi|194334315|ref|YP_002016175.1| lysyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194312133|gb|ACF46528.1| lysyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 514

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 64/307 (20%), Positives = 120/307 (39%), Gaps = 29/307 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +  VR  G   F +I+D  G  QV    D    +  +  +   +  I G+  
Sbjct: 68  ETVSVAGRIMAVRKMGKASFFNIQDAKGRIQVYMKRDDVGQDAYRIFKLLDIGDIVGV-- 125

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----------YPESIRFKY 128
               +       TG+I + A++  +LS +         +              + +R++ 
Sbjct: 126 ----KGFTFRTKTGEISIHAEEFMLLSKSLRPIPVAKEKEVDGQKVTYDAFSDKELRYRQ 181

Query: 129 RFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R++DL     +    VKR+ I+  MR     + ++E  TPIL        AR F      
Sbjct: 182 RYVDLIVNPEVRNTFVKRSAIVTFMRTFFSEKGYLEVETPILQPVYGGAAARPFTTHHNA 241

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  A + Y + L+  GFD  F+ A  FR+E       P EF Q+++ +++ + 
Sbjct: 242 LDMELY-LRIANELYLKRLIVGGFDGVFEFAKDFRNEGIDRFHNP-EFTQVELYVAYKDY 299

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDKPDLRNPI 297
             ++  +E ++       +N    +           F R+   DAI +Y       ++  
Sbjct: 300 YWMMELVEQLIYRANLAVNNSENTTFLDNEISLKPPFTRLSIADAIMQYCDRDISGKSES 359

Query: 298 IMHNVTE 304
            + N+ +
Sbjct: 360 ELRNIAK 366



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 65/169 (38%), Gaps = 7/169 (4%)

Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
                 D        ++ RN IA++LG+          I+D  F E+ E   K+      
Sbjct: 344 AIMQYCDRDISGKSESELRN-IAKDLGLELDPKISSGKIIDEIFGEFVE--PKLIQPTFI 400

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
              P       K +        +++L+  G E+ +     +   +           +   
Sbjct: 401 MDYPTEMSPLAKEHRSKEGVVERFELIVGGKELCNSFSELNDPVIQRNRLEEQAKLRLRG 460

Query: 519 ENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           ++          RA + GMPP  G+  GIDR+VMLL G +++R+V  FP
Sbjct: 461 DDEAMVVDEDFLRALEYGMPPCAGLGIGIDRLVMLLCGEESIRDVIFFP 509


>gi|268315876|ref|YP_003289595.1| lysyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262333410|gb|ACY47207.1| lysyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 523

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 57/273 (20%), Positives = 106/273 (38%), Gaps = 14/273 (5%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F D++D  G  QV              V     L   G ++ 
Sbjct: 62  EVSIAGRIMTRRIMGKAAFFDLQDETGRIQVYVRRQDLPEGFYDQVFK--KLLDIGDIVG 119

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFG------EREYPESIRFKYRFLDL 133
                    +  G+I + A+++E+L+ A      V             +  R++ R+ DL
Sbjct: 120 VEGFVFRTRM--GEITVHARRLELLAKALRPLPVVKEQDGKVYNEVTDKEFRYRQRYADL 177

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
                + +   KR R+I ++R  +    ++E  TPIL        AR F+          
Sbjct: 178 IINPEVREVFRKRARMITTIRRFLDERGYLEVETPILQPMYGGASARPFITYHNALDMQL 237

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + Y + L+  G++  ++I   FR+E   S     EF  L++ +++ +   +++
Sbjct: 238 Y-LRIADELYLKRLIVGGYEGVYEIGKDFRNEGL-SRFHNPEFTMLELYVAYKDYYWMMD 295

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            +E +L  V  E +    V      I +     
Sbjct: 296 FVEELLEHVATEVTGSPEVQWGEHTISFRRPWP 328



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 6/149 (4%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            IA++LG+   +      I+D  F E+ E    +         P       K +      
Sbjct: 354 EIARKLGLEIDDTMGSGKIIDEIFGEFVE--PHLIQPTFIIDYPIELSPLAKRHREKPGL 411

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++++  G E+ +     +  +     F      +   +           RA + GMP
Sbjct: 412 VERFEVIVGGKELCNAFSELNDPDDQRARFEEQARLRAAGDEEAMQIDEDFLRALEYGMP 471

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G+  GIDR+ M+L    ++R+V LFP
Sbjct: 472 PTAGLGIGIDRLAMILTNQPSIRDVILFP 500


>gi|299783376|gb|ADJ41374.1| Asparagine--tRNA ligase [Lactobacillus fermentum CECT 5716]
          Length = 431

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 69/310 (22%), Positives = 122/310 (39%), Gaps = 32/310 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
              V   VR+  W+   R  G I FL +RD         +    D   FE+A+ +R E  
Sbjct: 10  PKHVNERVRIGVWLTDKRSSGKIAFLQLRDGTAFFQGVLLKNKVDEETFEMARHLRQEVS 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +             E+  +++E++  ++E P    G +E+       +R 
Sbjct: 70  LWVTGEIHEDTRSKF-------GYEIQIEELELIGDSDEYP---IGNKEHGIDFLLDHRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R R+I +         F +   PILT ++PEG  D       +Q +
Sbjct: 120 LWLRSSKPQAMMRIRDRVIRANYEFFGEHGFTKIDPPILTGNAPEGTTDLFHTEYFDQDA 179

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A   +R +   P FR E  ++ R   EF+ ++ EM+F+ Q++ L
Sbjct: 180 Y--LSQSGQLY-EEAGAMALNRVYSFGPVFRAEKSKTRRHLIEFWMIEPEMAFMHQEESL 236

Query: 251 NTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPDLR 294
              E  +  + ++  +                       + RI YD+AI        D++
Sbjct: 237 ELQEQYVAYLIQKVIDDCSRELEVLGRDPETLKPFTQLPYPRISYDEAIEMLQKAGMDIK 296

Query: 295 NPIIMHNVTE 304
                 +  E
Sbjct: 297 WGEDFGSPEE 306



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 55/152 (36%), Gaps = 27/152 (17%)

Query: 418 NHIAQELGIINC----NCF-EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               ++ G        + F +  +++++P     +  K      +P        +     
Sbjct: 295 IKWGEDFGSPEETYLADQFSKPVFVLNYP-----KAIKPFYMKGHPT-----RDDVYVCA 344

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DLL+ + +         EI  G  R    E + QA ++ G+ ++  +          + G
Sbjct: 345 DLLAPEGYG--------EIIGGSERETDYETLRQAIADAGLDEKDYQ----WYLDLRKYG 392

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             PH G   G++R +  +    +VRE   FP 
Sbjct: 393 SVPHSGYGLGLERFLTWIALQGHVRETIPFPR 424


>gi|291286674|ref|YP_003503490.1| asparaginyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290883834|gb|ADD67534.1| asparaginyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 453

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 65/350 (18%), Positives = 123/350 (35%), Gaps = 42/350 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIA 62
           R      L      S + + GWV   R      FL++ D   +  + A  + D   +++ 
Sbjct: 2   RNKIKDLLNAEHPESDITVHGWVRSKRDSKNFTFLELNDGSCLKNLQAIADEDIGTYDVL 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K + +   + I G ++    +         + EL A+ + ++  A++   P+  +R   E
Sbjct: 62  KDINTGASVEIKGDLIESPGKG-------QKWELKAKAVALVGGADQETYPLQKKRHSDE 114

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +   L  R +        R+    ++        F    TPI+T S  EGA     
Sbjct: 115 FLR-QIAHLRPRTNKYGAIFRIRSEASFAVHQFFRERGFHYVHTPIITGSDCEGAGQMFR 173

Query: 183 PSRVNQ------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            + +          F+   A      Q      A      +   P FR E+  + R   E
Sbjct: 174 VTTLEDTKKPVAEDFFGKAAYLTVSGQLDAESYACALGSVYTFGPTFRAENSNTPRHAAE 233

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFE---------------------EFSNGNTVSN 272
           F+ ++ EM+F +  D +   E  ++ +                       E    N ++N
Sbjct: 234 FWMIEPEMAFADIHDNMTLAEEFVKYLIWFLMENCKEDLELFFNFVDKELEAKLTNMLTN 293

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSV 320
           +F R+ Y +A++           P+       TEH  +   + F K + V
Sbjct: 294 DFERVEYREAVKILENSGEKFEYPVGFGVDLQTEHERYLTEKHFKKPVFV 343



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 77/233 (33%), Gaps = 47/233 (20%)

Query: 345 NEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG 404
            E+ +        Y+ W L E+        +    N V+ E      +M   D       
Sbjct: 254 EEFVK--------YLIWFLMEN----CKEDLELFFNFVDKELEAKLTNMLTNDFERVEYR 301

Query: 405 DPLKFCSFAA---------DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
           + +K    +                  E  +   +  +  ++ ++P             +
Sbjct: 302 EAVKILENSGEKFEYPVGFGVDLQTEHERYLTEKHFKKPVFVYNYP------------KS 349

Query: 456 HNPFTMPQGGM-ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             PF M Q    E++   DL         LV +  E+  G  R    +V+  A   +G+S
Sbjct: 350 IKPFYMRQNDDGETVAAMDL---------LVPSVGELIGGSQREERLDVLDSAIEKMGLS 400

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                  +G      + G  PH G   G +R++M + G  N+R+V  F  +  
Sbjct: 401 M----EEYGWYAELRKYGTVPHAGFGLGFERLLMFVTGVTNIRDVIPFARTPK 449


>gi|295658716|ref|XP_002789918.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226282879|gb|EEH38445.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 633

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 57/305 (18%), Positives = 125/305 (40%), Gaps = 20/305 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV-----VANP 54
           + +Y +   GD         VR++G ++  R  G  +IF D+R      QV      A  
Sbjct: 111 IKKYESLQKGDQIKE---KEVRIAGRIYTKRSAGAKLIFYDVRAEGVKIQVACQAQNAEG 167

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D +     + +R   ++ + G        T   N   G++ + A+++ +L+      +P 
Sbjct: 168 DVSFEAQHEHLRRGDIIGVVGW----PGRTAPKNRADGELSIFAKEVILLAPCL-HQIPS 222

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                  +  R++ R+LDL  +   +N  + R+++I  +R      +F+E  TP++ + +
Sbjct: 223 EHYGLRDQEQRYRQRYLDLIMNDKSRNVFITRSKMITYIRRFFDERDFVEVETPMMNSIA 282

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                   +    +      +  AP+ Y ++L+  G +R +++   FR+E       P E
Sbjct: 283 GGATAKPFITHHNDLNMDMFMRVAPELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-E 341

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F   +   ++ +  D++N  E ++ G+ +  + G   + +           +     P  
Sbjct: 342 FTTCEFYWAYADVYDVMNVTEELVSGLVKHITGGYETTFH----TQTGEEYKVNWKAPWK 397

Query: 294 RNPII 298
           R  +I
Sbjct: 398 RIEMI 402



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 4/95 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++      EI +     +        F      K   ++           + + G
Sbjct: 486 GLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQASQKAQGDDEAQMIDENFCTSLEYG 545

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 546 LPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 580


>gi|51598364|ref|YP_072552.1| asparaginyl-tRNA synthetase [Borrelia garinii PBi]
 gi|59798512|sp|Q662R1|SYN_BORGA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|51572935|gb|AAU06960.1| asparaginyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 462

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 138/374 (36%), Gaps = 54/374 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +  + A      +    +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFTEKDLKKLTTGASIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++  A+    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKIYSFNVIGEADSKTYPLQKKRHTFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------ 186
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKPN 185

Query: 187 -------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NSLSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR-------------------- 276
           ++ EM+F + +D ++  E++L+ +     N  +   +FL                     
Sbjct: 246 IEPEMAFYKLNDNISLAEDLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFE 305

Query: 277 -ICYDDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSV---NPGYEVWAIP 330
            I Y  AI    + K +    P    ++ T+H  +    +F K ++V      ++ + + 
Sbjct: 306 VITYTKAIEILESSKKNFEIKPCWGIDLQTDHERYLTEEIFKKPIAVIDYPKNFKAFYMK 365

Query: 331 AKGGGGNRAFCDRM 344
                      D +
Sbjct: 366 INKDNKTVKGMDIL 379



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 379 LVPRIGEIIGGSEREDDLQKLENRIKELNLNI----EHLNWYLDLRRFGSTPHSGFGLGL 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V    G  N+R+   FP +  
Sbjct: 435 ERLVQYTTGISNIRDSIPFPRTPK 458


>gi|309790508|ref|ZP_07685066.1| asparaginyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308227424|gb|EFO81094.1| asparaginyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 440

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 78/296 (26%), Positives = 124/296 (41%), Gaps = 30/296 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73
               V LSGW+H     G +IFL +RD  G+ Q V    N   ACF  A+ +  E    I
Sbjct: 16  ADQTVTLSGWIHNKTEKGKLIFLMLRDGSGMIQCVVFKKNVSEACFSQAQQLTQESACRI 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V + +             EL  Q++EI+S+ ++ P      +E+      ++R L +
Sbjct: 76  TGAVRADTR-------APSGYELDVQEVEIISLTQDYP---ISPKEHGVEFLMEHRHLWV 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  +I + +  + A+ FI   TPILTA++ EG  +       + G  Y 
Sbjct: 126 RSSKQHALLRIRAEVIAAAQEWLNAQGFIRFDTPILTATAAEGTTNLFGTDYFDLGRAY- 184

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y +  M S F + +   P FR E  ++ R   EF+ ++ E++F E  D L   
Sbjct: 185 LAQTGQLYVESGMMS-FGKVYCFGPTFRAEKSKTRRHLTEFWMIEPEVAFAEHADNLVLQ 243

Query: 254 ENVLRGVFEEFSNG---------------NTVSNNFLRICYDDAIRRYGTDKPDLR 294
           E  +  + +                      V   F R+ YD+AI        ++ 
Sbjct: 244 EQFVSAIVQRVLERRSEDLRVLERDLEPLKRVVPPFPRLTYDEAIDLIREKHHEVE 299



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 37/114 (32%), Gaps = 10/114 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   A   F M               + +  Y       EI  G  R H   ++      
Sbjct: 330 RFPSAIKAFYMQPDPDRPEVALCADLLASEGY------GEIIGGSQRIHDPALLEARIRE 383

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            G+S       +       + G  PH G   GI+R V  + G +++RE   FP 
Sbjct: 384 HGLSI----EDYRWYLDLRRYGTVPHSGFGMGIERAVAWISGTRHIRETIPFPR 433


>gi|326923086|ref|XP_003207772.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like [Meleagris
           gallopavo]
          Length = 476

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 85/386 (22%), Positives = 146/386 (37%), Gaps = 39/386 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKS 64
             DL        V + G VH  R  G   FL +R        +  V  +      + A +
Sbjct: 50  IKDLSEEKADEVVWVRGRVHTSRAKGKQCFLVLRQQQFNIQALVAVGQHASKQMVKFAAN 109

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE-- 122
           +  E ++ ++G+V  R A           +EL  Q+I ++S+AE        +   PE  
Sbjct: 110 INKESIVDVEGVV--RKAHQKIGGCTQQDVELHVQRIYVISLAEPRLPLQLDDAVRPEVE 167

Query: 123 -----------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
                        R   R +DLR  T       ++ I    R  +I + F+E  TP + +
Sbjct: 168 GEEDGRATVNQDTRLDNRVIDLRTSTSQAVFCLQSGICQLFRETLIRKGFVEIQTPKIIS 227

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F + P FR ED  + R  
Sbjct: 228 AASEGGANVFTVSYFKSSAYLA--QSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHL 285

Query: 232 GEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNFLRICYDDAIRR 285
            EF  LD+EM+F        D+I +T+  + +G+ E F +    V+  F    +      
Sbjct: 286 TEFVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQTEIQMVNKQFPCEPFKFLEPT 345

Query: 286 YGTDKPD-----LRNPIIMHNVTEHFVHSE----FRVFSKILSVNPGYEVWAIPAKGGGG 336
              +  +         + M +  +    +E      V  K  S +    +       G  
Sbjct: 346 LRLEYREAVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKKNSNSYDMFMRGEEILSGAQ 405

Query: 337 NRAFCDRMNEWARSQG---QPGLAYI 359
                  + E A+  G   +   AYI
Sbjct: 406 RIHDPQLLTERAKHHGIDLEKIKAYI 431



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 4/97 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               +  YD+   G EI SG  R H  +++ +   + GI       +      +F+ G P
Sbjct: 384 EKKNSNSYDMFMRGEEILSGAQRIHDPQLLTERAKHHGIDL----EKIKAYIDSFRFGAP 439

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 440 PHAGGGIGLERVTMLYLGLHNVRQTSMFPRDPKRLTP 476


>gi|319942341|ref|ZP_08016656.1| lysyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804214|gb|EFW01114.1| lysyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 509

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 61/284 (21%), Positives = 118/284 (41%), Gaps = 20/284 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V  SG +   R  G   F  +RD  G  Q     +    +   + ++  +  I      
Sbjct: 70  EVACSGRIMLKRIMGKASFCTVRDFTGTMQYFVQQNEVGPDAYAAFKTFDLGDI------ 123

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
            +A+ +      G + +  ++I +++ +   PLP   +      + ++ R++DL  +   
Sbjct: 124 VAAKGVLFRTHAGDLAIRVKEIRLMTKSIR-PLPDKHKGLQDTELCYRQRYVDLIMNEES 182

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
           +N    R++ I ++R  M+   F+E  TP+L        A+ F+          Y L  A
Sbjct: 183 RNRFLTRSKAIAAIRAFMLNHRFLEVETPMLHPIPGGANAKPFITHHNALDMDMY-LRIA 241

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  ++   ++    D ++  E +L
Sbjct: 242 PELYLKRLVVGGFERVFEINRNFRNEGV-SVRHNPEFTMMEFYATYWTYRDQMDFTEELL 300

Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
           R V +E +    +            F R+    AI+++  +  D
Sbjct: 301 RTVAKEATGSMVLQYQGHEIDLSKPFHRLTPLAAIKKFAPNYTD 344



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E K I+        P       + +D       +++L   G E A+G    +  
Sbjct: 377 LFEETAEAKLIEPT-FIIDYPVEISPLARASDADPEITERFELYIAGRETANGFSELNDP 435

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           +     F      K   ++          RA + G+PP  G   GIDR +MLL  A  +R
Sbjct: 436 DDQAARFRAQADKKSHGDDEAMYYDADYIRALEYGLPPTAGCGIGIDRFMMLLTDAPTIR 495

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 496 DVLLFPHMR 504


>gi|71065613|ref|YP_264340.1| lysyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|123761770|sp|Q4FSV2|SYK_PSYA2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71038598|gb|AAZ18906.1| lysyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 514

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 64/309 (20%), Positives = 122/309 (39%), Gaps = 39/309 (12%)

Query: 4   YRTHSCGDLGVSDVG---------------SFVRLSGWVHRVRPHGGIIFLDIRDHYGIT 48
            RT    DL  +  G               + V ++G V   R      F+ I+D  G  
Sbjct: 47  KRTDYAQDLQTAFEGISKQEIADNDAKGEKTQVNVAGRVMLNRG----AFIVIQDMTGRI 102

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
           Q+         E    ++S  +  I G+               G + +  +++++L+ A 
Sbjct: 103 QLYVARKELDEETLADIKSLDLGDIVGV------SGYIGRSGKGDLYVHIEEMQLLTKAL 156

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
             P+P           R++ R LDL  + T     + R+++I+ +R  M+ E F+E  TP
Sbjct: 157 R-PMPNKFHGLADVEARYRNRHLDLMTNETTRDTFMVRSQVISGIRKFMLNERFMEVETP 215

Query: 168 ILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           ++        AR F+          Y L  AP+ Y + L+  GF++ F+I   FR+E   
Sbjct: 216 MMHPIPGGAVARPFVTHHNALDMPLY-LRIAPELYLKRLVVGGFEKVFEINRSFRNEGVS 274

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRI 277
           +   P EF  ++   ++ +  D+++  E +   +  +      ++           F R+
Sbjct: 275 TRHNP-EFTMIEFYQAYADYHDLMDLTERLFNELATDILGTTEITYQEEDISLKAPFERL 333

Query: 278 CYDDAIRRY 286
              +AI +Y
Sbjct: 334 SMSNAIAKY 342



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E    E ++         P       + +D       +++L   G E+A+G    +   
Sbjct: 383 FE-ETAEHQLRQPTFITEYPAETSPLARRSDDNPEITDRFELFVGGRELANGFSELNDPA 441

Query: 503 VMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F      K+  ++           A   G+PP  G   GIDR+VMLL  + ++R+
Sbjct: 442 DQAERFLGQVAEKDAGDDEAMHFDAEYIEALSYGLPPTAGEGIGIDRLVMLLTDSASIRD 501

Query: 559 VSLFPMSQN 567
           V LFP  + 
Sbjct: 502 VILFPHMRR 510


>gi|34496515|ref|NP_900730.1| lysyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|39932059|sp|Q7NZ62|SYK_CHRVO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|34102369|gb|AAQ58735.1| lysyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 502

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 58/283 (20%), Positives = 115/283 (40%), Gaps = 20/283 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F  ++D  G  Q   + D+   ++    +   +    G +++ 
Sbjct: 67  VAVAGRMMLKRVMGKASFATLQDVSGRIQAFISRDNVGEDVYADFKRWDL----GDIVAV 122

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR-DTLH 139
                     TG++ + A ++ +LS     PLP        +  +++ R+ DL   +   
Sbjct: 123 KGMLF--KTKTGELTVQATEVRMLSK-NIRPLPEKFHGIADQETKYRQRYADLIMSEESR 179

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  +KR++I+  +R  M+ E ++E  TP++        A+ F+          Y L  AP
Sbjct: 180 ETFIKRSKIVQKVRDVMVGEGYLEVETPMMHPIPGGASAKPFVTHHNALDMPLY-LRIAP 238

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  G +R F+I   FR+E   +   P EF  ++   ++ +   ++   E ++R
Sbjct: 239 ELYLKRLVVGGLERVFEINRNFRNEGMSTRHNP-EFTMIEFYEAYSDYQRMMEMTETIIR 297

Query: 259 GVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPD 292
                     TV+           F R     AI+ Y     D
Sbjct: 298 ECALVACGSTTVTYQGKEVDLGKPFDRFTIVQAIKHYNPQYTD 340



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 27/158 (17%)

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  + +E        +   +I+D+P                            +G+
Sbjct: 366 LGSLQLALFEEC--AESLLWNPTFIIDYP---------------------VEVSPLARGS 402

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
           D       +++L   G E A+G    +  E     F      K+  ++          RA
Sbjct: 403 DTQPGLTERFELFIVGREHANGYSELNDPEDQAARFQAQVAQKDAGDDEAMHYDADYIRA 462

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + G+PP GG   GIDR+VMLL  A ++R+V LFP  +
Sbjct: 463 MEYGLPPTGGCGIGIDRLVMLLTDAPSIRDVILFPHMR 500


>gi|228952555|ref|ZP_04114631.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228807021|gb|EEM53564.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 428

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 1   MKRSLTKEC----KKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 55

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++  
Sbjct: 56  ---KVDVESVVHVIGEIVETSKTEL-------GVEVLAHEVKVINSAEPLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +    +    L+I
Sbjct: 224 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 262



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     ++  
Sbjct: 293 GDLDTEGEKLLGKYVKEIYNSEFVFITHYP-----------KKARPMYTMPNKENPAITD 341

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ 
Sbjct: 342 S---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRY 388

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 389 GCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 422


>gi|282880896|ref|ZP_06289589.1| asparagine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281305278|gb|EFA97345.1| asparagine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 464

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 55/292 (18%), Positives = 108/292 (36%), Gaps = 28/292 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFE 60
             RT     L  +D    V + GWV   R    + F+ + D   I  V    +P++   E
Sbjct: 1   MKRTKIIDVLQSTDFNQEVLVKGWVRTHRSSKAVHFIALNDGSTIKNVQIVVDPETIDPE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K++ +   LC+ G ++    +          +E+  ++IEI  +           +  
Sbjct: 61  TLKNITTGACLCVSGTLVESQGQGQT-------VEIQGKEIEIYGLCGNDYPMQKKGQ-- 111

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
                 ++  L LR +T    +  R  +  ++        +    TPI+TAS  EGA + 
Sbjct: 112 SFEYMRQHAHLRLRTNTFGAVMRIRHNMAIAIHKYFHDHGYFYFHTPIITASDAEGAGEM 171

Query: 181 LVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDE 223
              +  +                 F+    +     Q +  L A+   + +   P FR E
Sbjct: 172 FQVTTQDLNNLQRDEQGKVKYDDDFFGKMTSLTVSGQLEGELGATALGQIYTFGPTFRAE 231

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +  + R   EF+ ++ E++F + DD++   E  ++   +   +       FL
Sbjct: 232 NSNTPRHLAEFWMIEPEIAFTDLDDLMGIEEEFIKYCVQWALDNCKDDLEFL 283



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 11/130 (8%)

Query: 448 EEKKIDFAHN---PFTMPQGGME----SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           E ++    H+   P  M     E     +K N+          L     EI  G +R   
Sbjct: 338 EHERYLVEHHFKKPVIMYNYPKEIKAFYMKINEDGKTVQGTDVLFPQIGEIIGGSVREES 397

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            E +L    +  I  + +           + G  PHGG   G +R+++ + G +N+R+V 
Sbjct: 398 YEKLLGEIEHRHIPMKDMW----WYLDTRKFGSCPHGGFGLGFERLILFVTGMQNIRDVI 453

Query: 561 LFPMSQNFCD 570
            FP +    +
Sbjct: 454 PFPRTPKSAE 463


>gi|322433972|ref|YP_004216184.1| asparaginyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321161699|gb|ADW67404.1| asparaginyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 444

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 65/298 (21%), Positives = 115/298 (38%), Gaps = 28/298 (9%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIA 62
           T    +L  +  G  V L GW++ +R  G ++F   RD  G  Q +          FE  
Sbjct: 7   TARISEL-AAHEGQSVTLKGWLYNLRASGKLLFPIFRDGTGTIQGIVPKAAVPEELFETL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K++  E  L + G V + +             EL  + ++++    +        +E   
Sbjct: 66  KTLTLESSLEVTGKVRADAR-------APSGFELDVEGLKVIQRVPDETPFPIQLKEAGV 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
               ++R L +R       +  R  I+ +         F+    PILT ++ EG  +   
Sbjct: 119 DFLMEHRHLWIRTPRQSAILRVRATIMRAAAQYFDDNGFVRTDPPILTPNACEGTSELFE 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
               +    Y L Q+ Q Y +   A    + +   P FR E  ++ R   EF+ ++ E++
Sbjct: 179 MDYFDDDKAY-LTQSGQLYIE-ATALALGKVYSFGPTFRAEKSKTRRHLTEFWMVEPELA 236

Query: 243 FVEQDDILNTMENV---------------LRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           F   DD+L   EN                L+ + ++ S   T+   F R+ YDDA + 
Sbjct: 237 FATLDDLLVLAENYLSFIVAAVLEKHQADLKVIGKDVSKLETIKAPFPRLSYDDAHKM 294



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 41/115 (35%), Gaps = 10/115 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   A   F M     +  K   +  +    Y       EI  G  R    +++     +
Sbjct: 334 RYPSAMKAFYMQPDPEDPTKALCVDVLAPEGY------GEIIGGSQRVDDYDLLKSRIEH 387

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G+      + F       + G  PHGG   GI+R+V  + G  +VRE   F  +
Sbjct: 388 HGLPL----DAFQWYLDLRKYGSVPHGGFGMGIERVVAWICGLDHVRETIPFART 438


>gi|256090517|ref|XP_002581234.1| lysyl-tRNA synthetase [Schistosoma mansoni]
 gi|238667090|emb|CAZ37473.1| lysyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 634

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 99/593 (16%), Positives = 178/593 (30%), Gaps = 116/593 (19%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           + +Y + S G+  + DV   V ++G VH  R  G  +IF DIR      QV+AN  S   
Sbjct: 69  IKKYSSLSSGE-HLDDV--SVSIAGRVHAKRSAGSKLIFYDIRSEDCRLQVMANIRSYKS 125

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E          +   G ++  S     + +  G++ +   +I++LS      LP      
Sbjct: 126 ET--EFHDINEIIHLGDIIGCSGSPGKSKL--GELSIIPHEIKLLSPCL-YQLPHMHYGV 180

Query: 120 YPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
             +  RF+ R+LDL   + + +  + R RIIN +R  +    F+E  TP++   +   A 
Sbjct: 181 KDKETRFRQRYLDLLMNEDVRQRFITRARIINYVRRFLDDLGFLEVETPMMNTIAGGAAA 240

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
              +    +      +  AP+ Y ++L+  G                             
Sbjct: 241 KPFITYHNDLNMNLYMRVAPELYLKMLIIGGL---------------------------- 272

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
                           N +  +   F N      +       +    Y  D  DL     
Sbjct: 273 ----------------NRVYELGRVFRNEGIDLTHNPEFTSCEFYMAYA-DYEDL----- 310

Query: 299 MHNVTEHFVHSEFRVFSK-ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
           M    +        +F   I+  +P                   +  ++ A         
Sbjct: 311 MTITEDLISGLVKHLFGSYIIKYHPDGAESDEIIVDCTPPFKRINFYDDLAAKLNTK--- 367

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
                           P+ +      T    +++  Q G        +P           
Sbjct: 368 ---------------LPLPETFETEETRQFFLKIAAQHG----IDCPEPKTTARLLDKLA 408

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
               + L +              P +             +P  M     E          
Sbjct: 409 GEFLEPLCVN-------------PTF----------LTCHPCIMSPLAKEHRS----RPG 441

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L     E+ +     +   V  + F      K   +            A   G+
Sbjct: 442 LTERFELFMLHKELCNAYTELNDPVVQRERFLEQAKDKAAGDAEAMVTDEQFLTALGYGL 501

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           PP  G   GIDR+ M L    N++EV LFP  +   +    +P     E+L++
Sbjct: 502 PPTAGWGLGIDRLTMFLTNTNNIKEVILFPAMKPEAN--SAAPLNPMSEKLQD 552


>gi|227543674|ref|ZP_03973723.1| asparagine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300908734|ref|ZP_07126197.1| asparagine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227186358|gb|EEI66429.1| asparagine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300894141|gb|EFK87499.1| asparagine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 448

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 71/355 (20%), Positives = 130/355 (36%), Gaps = 26/355 (7%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           T +  +     VG  V++  W+   R  G I FL +RD  G  Q +   +    E   S 
Sbjct: 19  TITISE-APKHVGETVKIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNDVSEEKFDSA 77

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           + +        V    AE   +       E+  +  +I+  +E+ P    G +E+     
Sbjct: 78  KHDLHQETSFWVTGEIAEDKRSKF---GYEIHIKDFDIVGESEDYP---IGNKEHGIDFL 131

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R+R+  +         F +   P LT S+PEG  +      
Sbjct: 132 LDNRHLWLRSRKPWALMRIRSRVKLATMEFFEKHGFTQFDAPELTGSAPEGTTELFETDY 191

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ +F  L Q+ Q Y     A    R + + P FR E  ++ R   EF+ ++ EM+++ 
Sbjct: 192 FDRSAF--LSQSGQLY-AEAGAMALGRVYTMGPTFRAEKSKTRRHLMEFWMIEPEMAWMH 248

Query: 246 QDDILNTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTD 289
           QD+ L   E  +  + ++  +                       + RI Y  AI      
Sbjct: 249 QDESLKIQEQYIAYLVQDLIDHCARELEMVGRSVESLKPFTELPYPRITYKKAIEMLQKS 308

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
             D+       +  E ++  +F+    IL+     + + +P       +  C  +
Sbjct: 309 GFDVEYGADFGSPEETYLADQFQKPVFILNYPKEIKAFYMPEDPEDSRQVICADL 363



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 22/139 (15%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +I+++P     +E K      +P          +   DLL+ + +         EI 
Sbjct: 332 KPVFILNYP-----KEIKAFYMPEDP-----EDSRQVICADLLAPEGYG--------EII 373

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R++  E +       G+SK      +G      + G  PH G   G++R +  +  
Sbjct: 374 GGSERSYDYEYITNKLEENGLSK----EDYGWYDDLRKYGSIPHSGFGMGLERFLAWITL 429

Query: 553 AKNVREVSLFPMSQNFCDL 571
             ++RE   FP   N  + 
Sbjct: 430 QDHIRENIPFPRMLNRLNP 448


>gi|242011230|ref|XP_002426358.1| predicted protein [Pediculus humanus corporis]
 gi|212510435|gb|EEB13620.1| predicted protein [Pediculus humanus corporis]
          Length = 571

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 89/574 (15%), Positives = 164/574 (28%), Gaps = 113/574 (19%)

Query: 16  DVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +  + V L+G +H +R  G  +IF D+R      Q++AN      E  +    +      
Sbjct: 105 EEDTVVNLAGRIHSIRGSGSKLIFYDLRSEGVKIQIMANAKYYVSE--ELFSEDTSKLGR 162

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++             G++ +  ++I +L+      LP        +  RF+ R+LD  
Sbjct: 163 GDIVGVKG--HPGKTKKGELSVIPKEITLLTPCL-HMLPHLHYGLKDKETRFRMRYLDCI 219

Query: 135 -RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
             D + +    R +II+ +R  +    F+E  TPI+   +   +                
Sbjct: 220 LNDYVRQKFFIRAQIISYIRRFLDELGFLEIETPIMNMIAGGASAKPFTTYHNELNMSLY 279

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y ++L+  G DR ++I                                     
Sbjct: 280 LRVAPELYHKMLVVGGIDRVYEIG------------------------------------ 303

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
                    +F N      +       +    Y              +  +    +E  +
Sbjct: 304 --------RQFRNEGIDLTHNPEFTTCEFYMAYA-------------DYNDLMEITEKLL 342

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMG 373
              + ++   Y++   P KG        D    + R    P L            +    
Sbjct: 343 SGMVKTIFGSYKIKYHP-KGPDDEEVEIDFTPPFKRIYMIPAL---------EEELKVKL 392

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  +         +   L  +           P                    +   C  
Sbjct: 393 PKPQDFGSPEANKVLKDLCAK----FQVECPPPTTSARLLDKLVGEF------LEEKCIN 442

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             +I D                 +P  M                   +++L     E+ +
Sbjct: 443 PTFICD-----------------HPQVMSPLAKWHRSTP----GLTERFELFIMKKEVCN 481

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVML 549
                +   V  + F      K   ++           A + G+PP GG   GIDR+ M 
Sbjct: 482 AYTELNDPLVQRERFEEQAKDKAAGDDEAQLIDENFCTALEYGLPPTGGWGMGIDRLTMF 541

Query: 550 LLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
           L  + N++EV  FP            P    V+Q
Sbjct: 542 LTDSNNIKEVLFFP----AMKPEDQKPEEKEVKQ 571


>gi|228972207|ref|ZP_04132822.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978822|ref|ZP_04139191.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228780898|gb|EEM29107.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228787520|gb|EEM35484.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
          Length = 428

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 1   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 55

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G ++  S   +        IE+ A ++++++ AE LP  +  ++  
Sbjct: 56  ---KVDVESVVHVIGEIVETSKTEL-------GIEVLAHEVKVINGAEPLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +    +    L+I
Sbjct: 224 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 262



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 62/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TM      ++  
Sbjct: 293 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTMQNKENPAITD 341

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+       +F      F+ 
Sbjct: 342 S---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----EKFQSYLNTFRY 388

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++RIV  +L   NVRE S FP  
Sbjct: 389 GCPPHGGFGIGLERIVYKILELTNVREASAFPRD 422


>gi|315230963|ref|YP_004071399.1| asparaginyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183991|gb|ADT84176.1| asparaginyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 430

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 71/309 (22%), Positives = 128/309 (41%), Gaps = 31/309 (10%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSV 65
            C  +     G  VRL+GWV+R R     +F+ +RD  GI Q V   +     +E AK  
Sbjct: 6   YCAQVKPEMEGKRVRLAGWVYRKREIKDKVFIVLRDSSGIIQTVFKEEISKEAYETAKKT 65

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + I+G V              G +E+ A KIE++   E  P+     ++      
Sbjct: 66  GIESSVIIEGTVKQDKR-------APGGVEIQADKIEVIQNVEFFPIT----KDASPEFL 114

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR   +   +  +  +I + R  ++ + + E   PIL   + EG         
Sbjct: 115 LDVRHLHLRSPKVAAIMKVKATMIQAAREWLLQDGWYEVFPPILVTGAVEGGATLFKLKY 174

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ ++  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E ++++
Sbjct: 175 FDKTAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD 231

Query: 246 QDDILNTMENVLRGVF---------------EEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
             DI+   E ++  +                ++F+        F RI YD+AI    +  
Sbjct: 232 LWDIMKVEEELVSYMVQRTLELRRKEIEMYRKDFTTLKNTEPPFPRISYDEAIDILQSKG 291

Query: 291 PDLRNPIIM 299
            ++     M
Sbjct: 292 VNIEWGEDM 300



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 21/153 (13%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
               +++G          +  D PF+ +             F M +        +D   +
Sbjct: 294 IEWGEDMGADEERVLTEEF--DRPFFVY-----GYPKHIKAFYMKED------PSDPRKV 340

Query: 478 KAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            A   D++      EI  G  R    + ++Q     G+  +  E          + G  P
Sbjct: 341 LAA--DMLAPEGYGEIIGGSEREDDYDKLVQRILEEGMDPKDYE----WYLDLRKYGSVP 394

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           H G   G++R+V  +L   +VR  +LFP +   
Sbjct: 395 HSGFGLGVERVVAWILNLDHVRWATLFPRTPTR 427


>gi|332704184|ref|ZP_08424272.1| Asparaginyl-tRNA synthetase [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332554333|gb|EGJ51377.1| Asparaginyl-tRNA synthetase [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 460

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 64/360 (17%), Positives = 128/360 (35%), Gaps = 50/360 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH  RT     L        + L GWV   R   G  FL++ D   +  +    D    +
Sbjct: 1   MH--RTSINEALNAEAPRDSITLMGWVRTRRDAKGFSFLELNDGSCLANIQVIVDEGVAD 58

Query: 61  IA--KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            A  K + +   + + G+++    +         + E+ A+ I +   A+    P+  +R
Sbjct: 59  AATLKMLNTGSAVKVQGMLVESPGKG-------QKWEVKAKAISVFGDADPESFPLQKKR 111

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R     L  R +        R+    ++        +    TPI+T +  EGA 
Sbjct: 112 HSDEFLR-TIAHLRPRTNKFGALFRIRSEAAFAVHDYFRRNGYFYVQTPIITGADCEGAG 170

Query: 179 DFLVPSRVN------------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           +    + ++            +G F+   A      Q    + A    + +   P FR E
Sbjct: 171 EMFRVTTLDPSTGKPAAENPFEGDFFGRGAHLTVSGQLSAEVFACSLGKVYTFGPTFRAE 230

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------- 267
           +  + R   EF+ ++ E++F +  D ++  E+ L+ + +                     
Sbjct: 231 NSNTPRHAAEFWMIEPEVAFADLGDNMDLAEDFLKSLIDHVRTHCAADLDLFAKFVDKDL 290

Query: 268 -----NTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
                N ++  F+R+ + ++I+           P+   M   TEH  +     F + + V
Sbjct: 291 AASLDNIMAKPFVRLPHGESIQILKKSGKQFDFPVQDGMDLQTEHERYLTEEHFKRPVIV 350



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 60/162 (37%), Gaps = 18/162 (11%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFP----FYEWNEEEKKIDFAH--NPFTMPQGGME-- 467
            R    + + I+  +  +F    DFP         E E+ +   H   P  +     E  
Sbjct: 303 VRLPHGESIQILKKSGKQF----DFPVQDGMDLQTEHERYLTEEHFKRPVIVYDYPKEIK 358

Query: 468 --SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
              ++ ND     A    L+    EI  G  R    +V+ +    +G+      + +   
Sbjct: 359 AFYMRLNDDGKTVAAMDVLLPRVGEIIGGSQREERLDVLERRIGELGLDM----SCYWWY 414

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
               + G  PH G   G +R +M++ G  N+R+V  FP +  
Sbjct: 415 LELRKFGSVPHAGFGMGFERFLMMVTGVTNIRDVIPFPRTPK 456


>gi|159042440|ref|YP_001541692.1| asparaginyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157921275|gb|ABW02702.1| asparaginyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 432

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 69/308 (22%), Positives = 119/308 (38%), Gaps = 27/308 (8%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAKSVR 66
              D+  +  GS V + GWV+R R  GG IF+ IRD  G+ Q V + D  + F+ A+ + 
Sbjct: 6   YVKDVAKAGEGSLVNVRGWVYRKRVTGGKIFIVIRDSTGVIQAVVSRDNESVFKKAEQLN 65

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  L   G V              G  E+    I   S             +       
Sbjct: 66  IESSLIATGYVRKEPR-------APGGFEIQVTDIPW-SFVGWQFPINEDAAKADSEYLL 117

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L +R   +   +  R+ I  ++     +  + E   P+   S+ EG       +  
Sbjct: 118 DMRHLWVRSRRMQAVLKIRSTIFGAIHEWFRSNGYYEVQAPMFITSAVEGGSTLFEVNYF 177

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            + ++  L Q+ Q Y + L+ S  ++ + IAP FR E  R+ R   EF+  + E+++   
Sbjct: 178 GEKAY--LTQSSQFYLEALIFS-LEKVYTIAPSFRAEKSRTRRHLTEFWHAEAEVAWAGL 234

Query: 247 DDILNTMENVLRGVFEEFSNGN---------------TVSNNFLRICYDDAIRRYGTDKP 291
           +D+    EN++  + +     N                V   F R+ YD+AI        
Sbjct: 235 EDMFTVTENLISHIVKRVLESNLEDLSLLGRKTEPLENVKPPFPRVPYDEAINILNKKGF 294

Query: 292 DLRNPIIM 299
           +L+    +
Sbjct: 295 NLKWGDDI 302



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 4/75 (5%)

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R +  + ++       ++ E  +          + G  PH G   G+DR+VM + G  ++
Sbjct: 362 RIYDYDELINKIKRFNLNPEDYQ----WYIDLRKYGSVPHAGFGLGVDRLVMWICGLDHI 417

Query: 557 REVSLFPMSQNFCDL 571
           R+   FP        
Sbjct: 418 RDALPFPRDMRRLKP 432


>gi|229150439|ref|ZP_04278655.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228632932|gb|EEK89545.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 432

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 5   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++  
Sbjct: 60  ---KVDVESVVHVIGEIVETSKTEL-------GVEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYIFQQVAKKCEIELQLLQI 266



 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 76/212 (35%), Gaps = 33/212 (15%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L YIF ++ +   +         + +     I     ++  +                 D
Sbjct: 246 LRYIFQQVAKKCEIELQ---LLQIEVPVITEIPKITLLEAQEILKSKYRKESPV----GD 298

Query: 416 ARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                 + LG      +  EF +I  +P             A   +TM      ++  + 
Sbjct: 299 LDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTMQNKENPAITDS- 346

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                   +DL+  G EI SG  R H  E++L +F   G+       +F      F+ G 
Sbjct: 347 --------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----EKFQSYLNTFRYGC 394

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 395 PPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|227514855|ref|ZP_03944904.1| asparagine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227086787|gb|EEI22099.1| asparagine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 436

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 69/310 (22%), Positives = 122/310 (39%), Gaps = 32/310 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
              V   VR+  W+   R  G I FL +RD         +    D   FE+A+ +R E  
Sbjct: 15  PKHVNERVRIGVWLTDKRSSGKIAFLQLRDGTAFFQGVLLKNKVDEETFEMARHLRQEVS 74

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +             E+  +++E++  ++E P    G +E+       +R 
Sbjct: 75  LWVTGEIHEDTRSKF-------GYEIQIEELELIGDSDEYP---IGNKEHGIDFLLDHRH 124

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R R+I +         F +   PILT ++PEG  D       +Q +
Sbjct: 125 LWLRSSKPQAMMRIRDRVIRANYEFFGEHGFTKIDPPILTGNAPEGTTDLFHTEYFDQDA 184

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A   +R +   P FR E  ++ R   EF+ ++ EM+F+ Q++ L
Sbjct: 185 Y--LSQSGQLY-EEAGAMALNRVYSFGPVFRAEKSKTRRHLIEFWMIEPEMAFMHQEESL 241

Query: 251 NTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPDLR 294
              E  +  + ++  +                       + RI YD+AI        D++
Sbjct: 242 ELQEQYVAYLIQKVIDDCSRELEVLGRDPETLKPFTQLPYPRISYDEAIEMLQKAGMDIK 301

Query: 295 NPIIMHNVTE 304
                 +  E
Sbjct: 302 WGEDFGSPEE 311



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 55/152 (36%), Gaps = 27/152 (17%)

Query: 418 NHIAQELGIINC----NCF-EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               ++ G        + F +  +++++P     +  K      +P        +     
Sbjct: 300 IKWGEDFGSPEETYLADQFSKPVFVLNYP-----KAIKPFYMKGHPT-----RDDVYVCA 349

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DLL+ + +         EI  G  R    E + QA ++ G+ ++  +          + G
Sbjct: 350 DLLAPEGYG--------EIIGGSERETDYETLRQAIADAGLDEKDYQ----WYLDLRKYG 397

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             PH G   G++R +  +    +VRE   FP 
Sbjct: 398 SVPHSGYGLGLERFLTWIALQDHVRETIPFPR 429


>gi|156842328|ref|XP_001644532.1| hypothetical protein Kpol_1052p21 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115177|gb|EDO16674.1| hypothetical protein Kpol_1052p21 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 591

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 111/268 (41%), Gaps = 13/268 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIAKS----VR 66
           G +     V ++G +H  R  G  + F  +  D   +  +    D    ++ +     ++
Sbjct: 117 GETLPNEKVSIAGRIHAKRESGSKLKFYVLHGDGVEVQVMSQLQDYGNQDVYEQDHDLLK 176

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ ++G V      T       G+I +  ++IE+L+      LP        +  R+
Sbjct: 177 RGDIVGVEGYV----GRTQPKKGGEGEISVFVERIELLTPCL-HMLPADHFGFKDQETRY 231

Query: 127 KYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +   +   + R++II+ +R  +   +FIE  TP++   +        V   
Sbjct: 232 RKRYLDLIMNKDARGRFITRSKIISYIRKFLDERSFIEVETPMMNVIAGGATAKPFVTHH 291

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            +      +  AP+ + + L+  G DR ++I   FR+E       P EF   +   ++ +
Sbjct: 292 NDLDMDMYMRIAPELFLKELVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYAD 350

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN 273
             D+++  E +   + +E +    +  +
Sbjct: 351 VYDLMDMTELLFSEMVKEITGSYVIKYH 378



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 44/121 (36%), Gaps = 4/121 (3%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E E         F  PQ      K +        ++++     EI +     +      +
Sbjct: 455 ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTELNDPFDQRE 514

Query: 507 AFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F      K+  ++           A + G+PP GG   GIDR+ M L  +  +REV LF
Sbjct: 515 RFEEQARQKDQGDDEVQLIDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLF 574

Query: 563 P 563
           P
Sbjct: 575 P 575


>gi|114561769|ref|YP_749282.1| lysyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122300806|sp|Q087X1|SYK_SHEFN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|114333062|gb|ABI70444.1| lysyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 500

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 63/311 (20%), Positives = 130/311 (41%), Gaps = 35/311 (11%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R+H   +L                    ++G V   R      FL I+D  G  Q  A  
Sbjct: 37  RSHKAAELQAQYGEQTKEALEELAFQTSIAGRVMAKRGP----FLVIQDVSGRIQAYAGK 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                     ++  +     G ++    +   +    G + ++ ++ ++L+ A   PLP 
Sbjct: 93  PVQG-----DLKERYQGLDIGDIIGVKGQLHLSG--KGDLYVNMEEYQLLTKALR-PLPE 144

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R++DL  +   +N  + R++++ ++R  M+ + F+E  TP++    
Sbjct: 145 KFHGLTDQETRYRQRYVDLIVNEDSRNAFIMRSKVVAAIRNFMVKKEFMEVETPMMHVIP 204

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+        + Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 205 GGASARPFVTHHNALDMAMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNP 262

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  ++  M++ +  D+++  E +L  + +E     ++            + R+   +AI
Sbjct: 263 EFTMMEFYMAYADYKDLMDLTEEMLGSIAQELLGSTSMPYGEETVEFGGAYARLSMLEAI 322

Query: 284 RRYGTDKPDLR 294
           ++Y  D   ++
Sbjct: 323 QKYNPDNATIQ 333



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + ND       +++    G E+A+G    + +E     F
Sbjct: 376 ETKLMQPTFITGYPADISPLARRNDNNDFITDRFEFFIGGREVANGFSELNDAEDQDNRF 435

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K+  ++           A + G+PP  G   GIDR+VML      +R+V LFP 
Sbjct: 436 KAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFPA 495

Query: 565 SQ 566
            +
Sbjct: 496 MR 497


>gi|282878253|ref|ZP_06287049.1| lysine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299671|gb|EFA92044.1| lysine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 595

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 60/312 (19%), Positives = 123/312 (39%), Gaps = 11/312 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    D    +    V ++G +   R  G   F++++D  G  QV    D  C + 
Sbjct: 55  NAFSTDIKADYQDGEEKREVVIAGRMMTRRVMGKASFVELQDSKGRIQVYVTRDDICPDE 114

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---- 117
            K + +     +  +      +       TG+I + AQ + +LS A +    V  +    
Sbjct: 115 NKDLYNVVFKRLLDIGDVIGIKGFVFKTQTGEISVHAQSLTLLSKALKPLPIVKYKDGVA 174

Query: 118 --REYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSP 174
             +     +R++ R++DL  +   K+    R  ++ +MR  +    + E  TP L A + 
Sbjct: 175 YDKFDDPELRYRQRYVDLIVNDGVKDTFLQRATVLRTMRKVLDEAGYTEVETPTLQAIAG 234

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y +  A + Y + L+  GF+  ++I   FR+E    +  P E
Sbjct: 235 GASARPFVTHFNALNTDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRNHNP-E 292

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT-DKPD 292
           F  +++ + + + + ++   E +L  +    +       +   I +    RR    D   
Sbjct: 293 FTCMELYVQYKDYNWMMAFTEKLLETICIAVNGSAEREIDGQMISFKAPYRRLPILDAIK 352

Query: 293 LRNPIIMHNVTE 304
            +    ++  TE
Sbjct: 353 EKTGYDLNEKTE 364



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/233 (19%), Positives = 78/233 (33%), Gaps = 34/233 (14%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W  +  +  L  I   ++ S      G +           I   +  + G D       +
Sbjct: 307 WMMAFTEKLLETICIAVNGSAEREIDGQMISFKAPYRRLPILDAIKEKTGYDLNEKTEDE 366

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFC--------WIMDFPFYEWNEEEKKIDFAHN 457
             + C       +    +  +I+    EFC        +I D+P               +
Sbjct: 367 IREICKKLDMEVDESMGKGKLIDEIFGEFCEGTFIQPTFITDYP------------VEMS 414

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           P T        L           +++L+ NG E+A+     +      + F       + 
Sbjct: 415 PLTKMHRSKPGL---------TERFELMVNGKELANAYSELNDPIDQEERFKEQMKLADK 465

Query: 518 VENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            ++          RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP  +
Sbjct: 466 GDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGKTFIQEVLFFPQMK 518


>gi|227823482|ref|YP_002827455.1| lysyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227342484|gb|ACP26702.1| lysyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 498

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 64/293 (21%), Positives = 122/293 (41%), Gaps = 20/293 (6%)

Query: 2   HRYRTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +L V   G          V ++G V   R  G  +F+D+ D  G  Q+ ++
Sbjct: 36  HFHRTMTNAELAVKYEGLEPDTETQDVVTVAGRVFSSRNSG--MFMDLHDASGKIQIFSH 93

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D+   E    +    +  I G+        I      G++ ++AQ I +L+ +  LP+P
Sbjct: 94  KDTTPEEARALLPMIDIGDIIGV------TGIVRRTKRGELTINAQAITMLTKSL-LPMP 146

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                     +R++ R LD+  +   K    +R+RI++ +R  M  + F+E  TP+L + 
Sbjct: 147 EKWHGLSDIELRYRKRHLDIMTNEESKLRFQQRSRIVSGIRRFMENDGFMEVETPMLHSV 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLP 231
                 +              L  AP+ Y +  + SG  D+ F+I   FR+E   +   P
Sbjct: 207 YGGATAEPFKTHHNTLKLDMYLRIAPELYLKRTLVSGLTDKVFEINRNFRNEGVSTRHNP 266

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            EF  ++   ++ + +DI++ +E +   +          +     I +    R
Sbjct: 267 -EFTMMECYWAYADYEDIMDLVERMFAELAVSIHGTTEFAYGDKEISFKGPFR 318



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 50/133 (37%), Gaps = 7/133 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMS 501
           +E   E   I  AH   T     +           +   +++  CN +E+ +     +  
Sbjct: 368 FEEKVEPTLIQPAH--VTHFPKDISPFAKEVPGEPRLVERFETYCNTWELGNAFSELNDP 425

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E                  +          A   GMPP GG+  G+DR++MLL  A ++R
Sbjct: 426 EEQRARMVEQLEQAHARGEKAKQLDDEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIR 485

Query: 558 EVSLFPMSQNFCD 570
           +V LFP  ++  D
Sbjct: 486 DVILFPARRHKAD 498


>gi|260663057|ref|ZP_05863950.1| asparaginyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260552678|gb|EEX25678.1| asparaginyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 431

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 69/310 (22%), Positives = 122/310 (39%), Gaps = 32/310 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
              V   VR+  W+   R  G I FL +RD         +    D   FE+A+ +R E  
Sbjct: 10  PKHVNERVRIGVWLTDKRSSGKIAFLQLRDGTAFFQGVLLKNKVDEETFEMARHLRQEVS 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +   +             E+  +++E++  ++E P    G +E+       +R 
Sbjct: 70  LWVTGEIHEDTRSKF-------GYEIQIEELELIGDSDEYP---IGNKEHGIDFLLDHRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R R+I +         F +   PILT ++PEG  D       +Q +
Sbjct: 120 LWLRSSKPQAMMRIRDRVIRANYEFFGEHGFTKIDPPILTGNAPEGTTDLFHTEYFDQDA 179

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A   +R +   P FR E  ++ R   EF+ ++ EM+F+ Q++ L
Sbjct: 180 Y--LSQSGQLY-EEAGAMALNRVYSFGPVFRAEKSKTRRHLIEFWMIEPEMAFMHQEESL 236

Query: 251 NTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPDLR 294
              E  +  + ++  +                       + RI YD+AI        D++
Sbjct: 237 ELQEQYVAYLIQKVIDDCSRELEVLGRDPETLKPFTQLPYPRISYDEAIEMLQKAGMDIK 296

Query: 295 NPIIMHNVTE 304
                 +  E
Sbjct: 297 WGEDFGSPEE 306



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 55/152 (36%), Gaps = 27/152 (17%)

Query: 418 NHIAQELGIINC----NCF-EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               ++ G        + F +  +++++P     +  K      +P        +     
Sbjct: 295 IKWGEDFGSPEETYLADQFSKPVFVLNYP-----KAIKPFYMKGHPT-----RDDVYVCA 344

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DLL+ + +         EI  G  R    E + QA ++ G+ ++  +          + G
Sbjct: 345 DLLAPEGYG--------EIIGGSERETDYETLRQAIADAGLDEKDYQ----WYLDLRKYG 392

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             PH G   G++R +  +    +VRE   FP 
Sbjct: 393 SVPHSGYGLGLERFLTWIALQDHVRETIPFPR 424


>gi|226288139|gb|EEH43652.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 609

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 56/305 (18%), Positives = 123/305 (40%), Gaps = 20/305 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV-----VANP 54
           + +Y +   GD         VR++G ++  R  G  +IF D+R      QV      A  
Sbjct: 111 IKKYESLQKGDQIKE---KEVRIAGRIYTKRSAGAKLIFYDVRAEGVKIQVACQSQNAEG 167

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D +     + +R   ++ + G        T   N   G++ + A+++ +L+      +P 
Sbjct: 168 DVSFEAQHEHLRRGDIIGVVGW----PGRTAPKNRADGELSIFAKEVILLAPCL-HQIPS 222

Query: 115 FGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                  +  R++ R+LDL  +       + R+++I  +R      +F+E  TP++ + +
Sbjct: 223 EHYGLRDQEQRYRQRYLDLIMNDKSRNVFITRSKMITYIRRFFDERDFVEVETPMMNSIA 282

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                   +    +      +  AP+ Y ++L+  G +R +++   FR+E       P E
Sbjct: 283 GGATAKPFITHHNDLNMDMFMRVAPELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-E 341

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F   +   ++ +  D++N  E ++ G+ +  + G   + +           +     P  
Sbjct: 342 FTTCEFYWAYADVYDVMNVTEELVSGLVKHITGGYETTFH----TQTGEEYKVNWKAPWK 397

Query: 294 RNPII 298
           R  +I
Sbjct: 398 RIEMI 402



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 4/95 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++      EI +     +        F      K   ++           + + G
Sbjct: 486 GLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQASQKAQGDDEAQMIDENFCTSLEYG 545

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 546 LPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 580


>gi|288929148|ref|ZP_06422993.1| asparagine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329250|gb|EFC67836.1| asparagine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 467

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 61/290 (21%), Positives = 114/290 (39%), Gaps = 28/290 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT     L  +D GS V + GWV   R    + F+ + D   I  V    D   F  E+ 
Sbjct: 6   RTKIVDVLQRTDFGSEVNVKGWVRTHRSSKVVDFIALNDGSTINNVQIVVDPTKFDTELL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K + +   +   G ++    +  N+       E+   ++++L        P+  + +  E
Sbjct: 66  KQITTGACVSATGKLVESQGQGQNS-------EIQCTELQLLGGCGSDY-PMQKKGQTFE 117

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R ++  L LR +T    +  R  +  ++        F    TPI+TAS  EGA +   
Sbjct: 118 YMR-QHAHLRLRTNTFGAVMRIRHNMAIAIHQYFHEHGFFYFHTPIITASDAEGAGEMFQ 176

Query: 183 PSR--------------VNQGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDP 225
            +                    F+    +     Q +  L A+   + +   P FR E+ 
Sbjct: 177 VTTKKLDDLKKDEDGKVNYNDDFFGKMTSLTVSGQLEGELGATALGQIYTFGPTFRAENS 236

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + R   EF+ ++ EM+F++ DD+++T E+ ++       +       FL
Sbjct: 237 NTPRHLAEFWMIEPEMAFIDLDDLMDTEEDFIKYCVHWALDNCKDDLAFL 286



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 14/121 (11%)

Query: 451 KIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                   F M       +++G D+         L     EI  G +R    + ++    
Sbjct: 359 HYPKGIKAFYMKLDEDGRTVQGTDV---------LFPQIGEIIGGSVREENYDKLVAQIE 409

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
              I  + +           + G  PHGG   G +R+++ + G +N+R+V  FP +    
Sbjct: 410 ERHIPMKDMW----WYLDTRRFGSCPHGGFGLGFERLILFVTGMQNIRDVIPFPRTPKSA 465

Query: 570 D 570
           +
Sbjct: 466 E 466


>gi|218230781|ref|YP_002366908.1| aspartyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218158738|gb|ACK58730.1| aspartate--tRNA ligase [Bacillus cereus B4264]
          Length = 432

 Score =  188 bits (477), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 5   MKRSLTKEC----KKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++  
Sbjct: 60  ---KVDVESVVHVIGEIVETSKTEL-------GVEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDL 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQKVAKKCEIELQLLQI 266



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/212 (22%), Positives = 78/212 (36%), Gaps = 33/212 (15%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y+F ++ +   +         + +     I     ++  +                 D
Sbjct: 246 LRYMFQKVAKKCEIELQ---LLQIEVPVITEIPKITLLEAQEILKSKYRKESPV----GD 298

Query: 416 ARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                 + LG      +  EF +I  +P             A   +TMP     ++  + 
Sbjct: 299 LDTEGEKLLGKYVKEIYNSEFVFITHYP-----------KKARPMYTMPNKENPAITDS- 346

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                   +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ G 
Sbjct: 347 --------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRYGC 394

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 395 PPHGGFGIGLERVVYKLLELTNVREASAFPRD 426


>gi|297569276|ref|YP_003690620.1| lysyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925191|gb|ADH86001.1| lysyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 492

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 116/284 (40%), Gaps = 18/284 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            + ++G V  +R  G   FL I+D  G  Q+    D    E     +   +    G +++
Sbjct: 54  TMAVAGRVMALRKFGKAAFLHIQDESGRIQIHIKRDEVGDEPFAVFKKIDI----GDIVA 109

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
            +         TG++ + A  + +L+ +   PLP           R++ R++DL  +   
Sbjct: 110 FTGPLFRTK--TGEVTIQALSLRLLTKSLR-PLPEKFHGLTDIETRYRQRYVDLMVNPEV 166

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
           ++  + R  II  +R  +    F+E  TP++ A +               G    L  AP
Sbjct: 167 RDTFRKRVEIIRLIRDFLSNRGFMEVETPMMQAIAGGATAKPFKTHHNALGLDLYLRIAP 226

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  G +R F+I   FR+E   +   P EF  L+   ++   ++++   E ++ 
Sbjct: 227 ELYLKRLLVGGLERVFEINRNFRNEGLSTRHNP-EFTMLEFYQAYATYEELMELTEEMIS 285

Query: 259 GVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDKPDL 293
            V  E      +S           + R   D+A+++ G   P+L
Sbjct: 286 WVTMEVCGSMQISYQGQAVDLAPPWRRYTMDEALQQIGGLSPEL 329



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
            +E   EEK +D      T     +  L + N+       +++L   G E+A+     + 
Sbjct: 360 LFECLVEEKLVDPTF--ITAYPTEVSPLARKNEDDPEITDRFELFITGREVANAFSELND 417

Query: 501 SEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
            +   +        +   E  F        RA + GMPP  G   GIDR+ MLL  + ++
Sbjct: 418 PDDQRRRLIKQIEERGEDEEIFPVLDEDYLRALEYGMPPAAGEGIGIDRLTMLLTDSPSI 477

Query: 557 REVSLFP 563
           R+V LFP
Sbjct: 478 RDVILFP 484


>gi|210620796|ref|ZP_03292247.1| hypothetical protein CLOHIR_00190 [Clostridium hiranonis DSM 13275]
 gi|210155146|gb|EEA86152.1| hypothetical protein CLOHIR_00190 [Clostridium hiranonis DSM 13275]
          Length = 495

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 76/432 (17%), Positives = 154/432 (35%), Gaps = 68/432 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
             + VG  V+++GW+   R      F+++ D       Q+V +     F+    +     
Sbjct: 45  KEAHVGQTVKVAGWIRTSRMSKNFGFIELNDGSFFKNMQIVLDEKLENFKEIGKLPISSS 104

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G       E ++       +E+ A K+E+  +++    P+  +R   E +R     
Sbjct: 105 ILVEG-------ELVSTEGAKQPVEIHATKVEVEGMSDS-SYPLQKKRHTLEYLR-TIAH 155

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++       NF+   +PI+T S  EGA +    + ++   
Sbjct: 156 LRPRSNTFSAVFRVRSLAAYAIHKFFQERNFVYAHSPIITGSDCEGAGEMFRLTTLDMEN 215

Query: 190 -------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+   A      Q    +MA  F   +   P FR E+  + R   E
Sbjct: 216 LPRTEEGKIDYSKDFFGKEANLTVSGQLNAEIMALAFRNVYTFGPTFRAENSYTGRHASE 275

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSN 272
           F+ ++ E+ F + +D +   E++++ +                            N V++
Sbjct: 276 FWMIEPEIVFADLEDNMELAEDMIKYIINYVMENAPEEMQFFNSFIDKGLLERLNNVVNS 335

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           +F+RI Y  AI        +  NP+       TEH  +    ++   + V    +     
Sbjct: 336 DFVRITYTKAIELLLESGHEFENPVEWGCDLQTEHERYITEEIYKAPVFVTDYPKDI--- 392

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR 390
                  +AF  RMNE  ++     L          G    +G   +        A    
Sbjct: 393 -------KAFYMRMNEDGKTVRAMDLLV-------PGVGEIVGGSQREEREDVLRARMQE 438

Query: 391 LDMQDGDSCFFI 402
           +++ + D  +++
Sbjct: 439 MNLNEEDYWWYL 450



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 53/143 (37%), Gaps = 27/143 (18%)

Query: 427 INCNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           I    ++   ++ D+P        K I      F M           D  +++A   DL+
Sbjct: 374 ITEEIYKAPVFVTDYP--------KDIKA----FYMRMNE-------DGKTVRAM--DLL 412

Query: 486 CNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
             G  EI  G  R    +V+      + ++    E  +       + G   H G   G +
Sbjct: 413 VPGVGEIVGGSQREEREDVLRARMQEMNLN----EEDYWWYLELRKYGTATHSGFGLGFE 468

Query: 545 RIVMLLLGAKNVREVSLFPMSQN 567
           RI+M + G  N+R+V  FP +  
Sbjct: 469 RIIMYMTGMSNIRDVIPFPRTPK 491


>gi|228939329|ref|ZP_04101921.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228820353|gb|EEM66386.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326939905|gb|AEA15801.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 432

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 5   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G ++  S   +        IE+ A ++++++ AE LP  +  ++  
Sbjct: 60  ---KVDVESVVHVIGEIVETSKTEL-------GIEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 62/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TM      ++  
Sbjct: 297 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTMQNKENPAITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+       +F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----EKFQSYLNTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++RIV  +L   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERIVYKILELTNVREASAFPRD 426


>gi|304383221|ref|ZP_07365694.1| lysine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335692|gb|EFM01949.1| lysine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 576

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 118/279 (42%), Gaps = 10/279 (3%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            +D    V ++G +   R  G   F++++D  G  QV    D  C +  K + +     +
Sbjct: 47  STDEQREVCIAGRMMTRRVMGKASFVELQDSKGRIQVYITRDDICPDDNKELYNTVFKRL 106

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFK 127
             +      +       TG+I + A+++ +L+ + +    V  +      +     +R++
Sbjct: 107 LDIGDFIGIKGFVFKTQTGEISVHARELTVLAKSIKPLPVVKYKDGVAYDKFDDPELRYR 166

Query: 128 YRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSR 185
            R++DL  +  + +  +KR  ++ +MR  + +  + E  TPIL + +    AR F+    
Sbjct: 167 QRYVDLVVNEGVKETFLKRAAVLRTMRSVLDSAGYTEVETPILQSIAGGASARPFITHFN 226

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + +
Sbjct: 227 ALNTEMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMELYVQYKD 284

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            + ++   E +L  +  E +       +   I +    R
Sbjct: 285 YNWMMAFTEQLLEKICMEVNGCTETVVDGKTISFKAPYR 323



 Score = 90.9 bits (224), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 68/195 (34%), Gaps = 36/195 (18%)

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC-------- 435
            +AI+ +      D       +    C       +    +  +I+    EFC        
Sbjct: 328 LDAIKEKTGF---DLNGMSETEIRDVCRKLGMETDETMGKGKLIDEIFGEFCEGTFIQPT 384

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           +I+D+P               +P T        L           +++L+ NG E+ +  
Sbjct: 385 FIIDYP------------VEMSPLTKMHRSKPGL---------TERFELMVNGKELTNAY 423

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
              +      Q F       +  ++          RA Q GMPP  GI  GIDR+VML+ 
Sbjct: 424 SELNDPIDQEQRFIEQMKLADKGDDEAMVIDRDFLRALQYGMPPTSGIGIGIDRLVMLMT 483

Query: 552 GAKNVREVSLFPMSQ 566
           G   ++EV  FP  +
Sbjct: 484 GQTAIQEVLFFPQMR 498


>gi|297580790|ref|ZP_06942716.1| lysyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297535206|gb|EFH74041.1| lysyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 512

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 63/292 (21%), Positives = 131/292 (44%), Gaps = 25/292 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G V   R      FL I++  G  Q  A+      E+ + ++ ++    
Sbjct: 68  LEALNHVVSIAGRVMAKRGP----FLVIQETSGRIQAYASK-----EVQQELKDKYQGLD 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++        +    G + ++ ++ ++L+ A   PLP        + +R++ R++DL
Sbjct: 119 IGDIIGVQGALHKSG--KGDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 175

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  + R+++++++R  MI++ F+E  TP++        AR F+          
Sbjct: 176 IVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPM 235

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y    AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++
Sbjct: 236 YV-RIAPELYLKRLVVGGFDRVFEINRNFRNEVL-SPRHNPEFTMMEFYMAYADYKDLMD 293

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
             E +L  V  E     ++            + R+   DAI+ Y  +   ++
Sbjct: 294 LTEELLSSVALEVLGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQ 345



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 388 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 447

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 448 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 506


>gi|221058405|ref|XP_002259848.1| lysine--tRNA ligase [Plasmodium knowlesi strain H]
 gi|193809921|emb|CAQ41115.1| lysine--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 585

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 102/569 (17%), Positives = 188/569 (33%), Gaps = 124/569 (21%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVAN------PDSACFEIAKSV 65
           G     + + ++G + RV   G  + F D+       QV+AN        S   E    +
Sbjct: 127 GEHLENTVLNVTGRIMRVSASGQKLRFFDLVGDGAKIQVLANFAFHDHTKSNFAEAYDKI 186

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           R   ++ I G                G++ +  ++  ILS    +    +G ++    IR
Sbjct: 187 RRGDIVGIVG---------FPGKSKKGELSIFPKETIILSPCLHMLPMKYGLKDT--EIR 235

Query: 126 FKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVP 183
            + R+LDL  +   +   + RT+IIN +R  +    FIE  TP +   +    A+ F+  
Sbjct: 236 SRQRYLDLMINESTRSTFITRTKIINYLRNFLNDRGFIEVETPTMNLVAGGANAKPFITH 295

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  A +   ++L+  G D+ ++I   FR+E   +   P EF   +   ++
Sbjct: 296 HNDLDLDLY-LRIATELPLKMLIVGGIDKVYEIGKVFRNEGIDNTHNP-EFTSCEFYWAY 353

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            +  D++   E+    +         +               Y  D PD ++PI +    
Sbjct: 354 ADFYDLIKWSEDFFSTLVMHLFGTYKIL--------------YNKDGPD-KDPIEID--- 395

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
                     + K+  V    ++     +    +    ++M                  L
Sbjct: 396 ------FTPPYPKVSIVEELEKLTNTKLEQPFDSPETINKM----------------INL 433

Query: 364 DESGNVAGMGP--VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH-- 419
            +   +    P   AK L+ + +  I  +   +     FFI   P      A   R+   
Sbjct: 434 IKENKIEMPNPPTAAKLLDQLASHFIENQYPNKP----FFIIEHPQIMSPLAKYHRSKPG 489

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + + L +  C                 E        ++PF   +      K  +    +A
Sbjct: 490 LTERLEMFICGK---------------EVLNAYTELNDPFKQKECFSAQQKDREKGDAEA 534

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           FQ+D                                            + + G+PP GG+
Sbjct: 535 FQFD---------------------------------------APYCTSLEYGLPPTGGL 555

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             GIDRI M L     +++V LFP  +  
Sbjct: 556 GLGIDRITMFLTNKNCIKDVILFPTMRPA 584


>gi|228914794|ref|ZP_04078403.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|301053717|ref|YP_003791928.1| aspartyl-tRNA synthetase [Bacillus anthracis CI]
 gi|228845113|gb|EEM90155.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|300375886|gb|ADK04790.1| aspartyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 432

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A F 
Sbjct: 5   MKRSLTKEC----TEKSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGF- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++  
Sbjct: 60  ---KVDVESIVHVIGEIVETSKTEL-------GVEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLGQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 68/164 (41%), Gaps = 28/164 (17%)

Query: 406 PLKFCSFA--ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
             K+C  +   D      + LG      +  EF +I  +P             A   +TM
Sbjct: 287 KSKYCKESPVGDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTM 335

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P     ++  +         +DL+  G EI SG  R H  E++L +F   G+      ++
Sbjct: 336 PNNENSAITDS---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DK 382

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           F      F+ G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 383 FQSYLNTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|189502577|ref|YP_001958294.1| lysyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|189498018|gb|ACE06565.1| hypothetical protein Aasi_1242 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 502

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 66/344 (19%), Positives = 127/344 (36%), Gaps = 28/344 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             + ++G +   R  G   F++++D  G  Q+  + D+ C    KS  +     +  +  
Sbjct: 53  KQISIAGRIMGRRIMGAASFVELQDASGKIQLYVHRDTLCPGDDKSFYNTVFKKLLDIGD 112

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------YPESIRFKYRFLD 132
               E        G+I +   K+ +LS A      V  + +           R++ R++D
Sbjct: 113 LIGIEGYVFTTQVGEISIHVNKLTLLSKALRPLPVVKEDDKQVYDAFTDPEQRYRQRYVD 172

Query: 133 L-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L    T      KRT++I ++R  + ++ + E  TPIL        AR F         S
Sbjct: 173 LLVTPTTRSIFQKRTQMIQAIRQYLNSQGYDEVETPILQPLYGGASARPFKTHHNTLDMS 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  G++  ++ A  FR+ +  S     EF  L++ +++ +   ++
Sbjct: 233 LY-LRIANELYLKRLIVGGYEGVYEFAKDFRN-EGMSRFHNPEFTMLELYVAYKDYKWMM 290

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           N  E +L  V         V      I +    +R+            M    +HF   +
Sbjct: 291 NLTEELLEQVALHLYGTTAVPVGTHTIDFKRPWKRF-----------TMFEAIQHFTGID 339

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354
                + L +       ++P +   G     D +       G  
Sbjct: 340 ISQMEE-LELRKAAATLSVPLEASAGKAKIIDEI------FGAK 376



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 51/143 (35%), Gaps = 25/143 (17%)

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             N  +  +I D+P      E   +   H                        +++++CN
Sbjct: 378 EPNLIQPTFITDYPV-----EMSPLAKQHR----------------DNPTLVERFEVICN 416

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGI 543
           G EI +     +      + F       +  +           RA   GMPP  G+  GI
Sbjct: 417 GKEICNAFSELNDPIEQRKRFEEQLQLGQRGDEEAMMLDEDFLRALSYGMPPTAGLGIGI 476

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR+ M++  A +++EV  FP  +
Sbjct: 477 DRLAMIMTNAPSIQEVIFFPQMR 499


>gi|52629606|gb|AAU28347.1| asparaginyl tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 478

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 66/392 (16%), Positives = 123/392 (31%), Gaps = 53/392 (13%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           G++    +   V + GWV   R    G+ F+ + D    + +            K V   
Sbjct: 24  GEIS---IDETVTVRGWVKTRRDSKAGLSFISLHDGSCFSPIQIVATDQLSNYHKEVTK- 79

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
                 G  M  + + + +       E+ A+ IE++   E         + +      + 
Sbjct: 80  ---LTAGCSMIATGKLVASQGKGQFFEIQAESIEVVGWVENPDTYPIQAKRHTLEFLREV 136

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +T+      R  +  ++      + F    TPI+TAS  EGA +    S ++ 
Sbjct: 137 AHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEGAGEMFRVSTLDL 196

Query: 189 --------------GSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+          Q           + +   P FR E+  + R  
Sbjct: 197 LNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMSKVYTFGPTFRAENSNTSRHL 256

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTV 270
            EF+ ++ E++F   +DI    +N+LR + +                          +  
Sbjct: 257 AEFWMIEPEIAFANLEDICKLSQNMLRYLCKTVLEERADDMDFFNQFVAPGCIERMEHIA 316

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            + F  + Y DAI+           P+   +   +EH  +      +++L   P      
Sbjct: 317 DSEFEIMTYTDAIKALEASDQKFEFPVSWGLDLQSEHERY-----LAEVLCKKPVIVTNY 371

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                G   R   D     A     PG+  I 
Sbjct: 372 PQEIKGFYMRLNDDGKTVAAMDVLAPGIGEII 403



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 6/100 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    E++ +      ++K      +       +
Sbjct: 383 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEILDRRMDECNLNK----EHYQWYRDLRR 437

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G  PH G   G +R++  + G  NVR+V  FP +    D
Sbjct: 438 YGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRTPGHAD 477


>gi|328952686|ref|YP_004370020.1| Asparaginyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328453010|gb|AEB08839.1| Asparaginyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 436

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 67/274 (24%), Positives = 97/274 (35%), Gaps = 16/274 (5%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT---QVVANPDSACFEIA 62
           +    DL    VG  V L GW++  R  G + FL +RD  G+     V        F   
Sbjct: 8   SVYIADL-PDKVGQEVSLRGWLYNKRSSGKVRFLILRDGTGLVQGVMVKGKLPETDFTAF 66

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +  E  L ++G+V              G  EL    +  L VA E P      +E+  
Sbjct: 67  DRLTQESSLSLEGVVRVEPR-------APGGYELEVTAVHPLHVASEYP---ISHKEHGV 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                +R L LR       +  R  II + R       F+   TPI T ++ EG      
Sbjct: 117 DFLLNHRHLWLRSPRQQAVLRVRDEIIRACRDFFADRRFVLVDTPIFTPTACEGTTTLFE 176

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                 G   A      Q      A    R +   P FR E  ++ R   EF+ L+ E++
Sbjct: 177 TDYF--GDRKAYLTQSGQLYLEAAALALGRVYCFGPTFRAEKSKTRRHLTEFWMLETEVA 234

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           F + +DI+   E +L  V             FL 
Sbjct: 235 FADLEDIMALAEALLCAVAVRVLENRIAELTFLE 268



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 4/75 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E +L       +     +          + G  PH G   GI+R+V  
Sbjct: 359 EIIGGSQREDDLEALLTRIKEHHLP----QEPLEWYLDLRRYGSVPHSGFGLGIERLVTW 414

Query: 550 LLGAKNVREVSLFPM 564
             G  +VRE   FP 
Sbjct: 415 FCGLHHVREAIPFPR 429


>gi|54295128|ref|YP_127543.1| asparaginyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|81368151|sp|Q5WUG0|SYN_LEGPL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|53754960|emb|CAH16448.1| asparagine tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 467

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 66/392 (16%), Positives = 124/392 (31%), Gaps = 53/392 (13%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           G++    +   V + GWV   R    G+ F+ + D    + +            K V   
Sbjct: 13  GEIS---IDETVTVRGWVKTRRDSKAGLSFISLHDGSCFSPIQIVATDQLSNYQKEVTK- 68

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
                 G  M  + + + +       E+ A+ IE++   E         + +      + 
Sbjct: 69  ---LTAGCSMIATGKLVASQGKGQFFEIQAESIEVVGWVENPDTYPIQAKRHTLEFLREV 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +T+      R  +  ++      + F    TPI+TAS  EGA +    S ++ 
Sbjct: 126 AHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEGAGEMFRVSTLDL 185

Query: 189 --------------GSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+          Q           + +   P FR E+  + R  
Sbjct: 186 LNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMSKVYTFGPTFRAENSNTSRHL 245

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTV 270
            EF+ ++ E++F   +DI    +N+LR + +                          +  
Sbjct: 246 AEFWMIEPEIAFANLEDICKLSQNMLRYLCKTVLEERSDDMDFFNQFVAPGCIERMEHIA 305

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            + F  + Y DAI+     +     P+   +   +EH  +      +++L   P      
Sbjct: 306 DSEFEIMTYTDAIKALEASEQKFEFPVSWGLDLQSEHERY-----LAEVLCKKPVIVTNY 360

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                G   R   D     A     PG+  I 
Sbjct: 361 PQEIKGFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 6/100 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    E++ +      ++K      +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEILDRRMDECNLNK----EHYQWYRDLRR 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G  PH G   G +R++  + G  NVR+V  FP +    D
Sbjct: 427 YGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRTPGHAD 466


>gi|224025132|ref|ZP_03643498.1| hypothetical protein BACCOPRO_01866 [Bacteroides coprophilus DSM
           18228]
 gi|224018368|gb|EEF76366.1| hypothetical protein BACCOPRO_01866 [Bacteroides coprophilus DSM
           18228]
          Length = 467

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 56/288 (19%), Positives = 102/288 (35%), Gaps = 24/288 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L   D G  V + GWV   R    + F+ + D   I  V    D A F+    
Sbjct: 6   RTKIVDLLKRRDFGVMVNVKGWVRTRRGSKQVSFIALNDGSTINNVQVVVDLANFDE--- 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
                     G  +S + E + +       E+ A++IE+L   +        ++ +    
Sbjct: 63  --EMLKQITTGACISVNGELVESVGAGQACEIQAREIEVLGTCDNTYPLQ--KKGHSMEF 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
             +   L  R +T       R  +  ++        F    TP++TAS  EGA      +
Sbjct: 119 LREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPLITASDCEGAGQMFQVT 178

Query: 185 RVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            +N                 F+    +     Q +  L A+     +   P FR E+  +
Sbjct: 179 TMNLYDLKKDENGSIIYDNDFFGKQASLTVSGQLEGELAATALGAIYTFGPTFRAENSNT 238

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            R   EF+ ++ E++F + +D ++  E  ++   +   +       FL
Sbjct: 239 PRHLAEFWMIEPEVAFNDINDNMDLAEEFIKYCVQWALDNCYDDVKFL 286



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P     +E K        F M Q         D  +++A  
Sbjct: 342 HERYLVEEHFKRPVILTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 382

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R    + +L     + I  + +           + G  PH G   
Sbjct: 383 V-LFPKIGEIIGGSEREADYDKLLTRIQELHIPMKDMW----WYLDTRKYGSCPHSGFGL 437

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G  N+R+V  FP + +
Sbjct: 438 GFERLLLFVTGMANIRDVIPFPRTPH 463


>gi|332534604|ref|ZP_08410437.1| asparaginyl-tRNA synthetase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035954|gb|EGI72434.1| asparaginyl-tRNA synthetase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 465

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 69/387 (17%), Positives = 126/387 (32%), Gaps = 55/387 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCI 73
           V S V + GW+   R    GI FL + D       Q V       ++   S+ +   + +
Sbjct: 16  VDSQVTIKGWIRTRRDSKAGISFLAVHDGSCFDPIQAVVPNSLNNYDEVTSLTAGCSVSV 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+++  + +  +        E+ A  + +L   E         + +      ++  L  
Sbjct: 76  TGVLVQSAGQGQS-------YEIQANSVTVLGWVENPDSYPMSAKRHSIEYLREHAHLRP 128

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ----- 188
           R + +      R  +  ++      + F   STPI+TAS  EGA +    S ++      
Sbjct: 129 RTNMIGAVTRVRNCLAQAIHRFYHEQGFYWISTPIITASDCEGAGEMFRVSTLDMQNLPL 188

Query: 189 ---------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+   A      Q      AS   + +   P FR E+  + R   EF+ 
Sbjct: 189 TDKGDVDYSEDFFGKEAFLTVSGQLNGETYASAMSKIYTFGPTFRAENSNTSRHLAEFWM 248

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFL 275
           ++ E++F + +DI    EN+L+ VF+                            V  +F 
Sbjct: 249 VEPEVAFADLEDIAKLAENMLKYVFKAVLEERRDDMEFFAQRVEKTAITRLEEFVDKDFA 308

Query: 276 RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           ++ Y DA+             +       +EH  +     F   + +             
Sbjct: 309 QVDYTDAVEILKNCGKKFEYAVEWGVDLQSEHERYLAEEHFKAPVVIKNYPRDI-----K 363

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIF 360
               R   D     A     PG+  I 
Sbjct: 364 AFYMRQNEDGKTVAAMDVVAPGIGEII 390



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 73/228 (32%), Gaps = 28/228 (12%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR-- 417
           FW ++     A +  +AK    +     +  L+ +  D  FF         +   +    
Sbjct: 246 FWMVEPEVAFADLEDIAKLAENMLKYVFKAVLEERRDDMEFFAQRVEKTAITRLEEFVDK 305

Query: 418 ----------NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN-----PFTMP 462
                       I +  G      +   W +D      +E E+ +   H          P
Sbjct: 306 DFAQVDYTDAVEILKNCG--KKFEYAVEWGVDL----QSEHERYLAEEHFKAPVVIKNYP 359

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           +         +         D+V  G  EI  G  R    +V+      +G++K      
Sbjct: 360 RDIKAFYMRQNEDGKTVAAMDVVAPGIGEIIGGSQREERLDVLDARLEEMGLNK----ED 415

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           +       + G  PH G   G +R+V  + G  NVR+V  FP ++   
Sbjct: 416 YSWYRDLRKYGSVPHSGFGLGFERLVAYVTGMGNVRDVIAFPRTKGSA 463


>gi|297171211|gb|ADI22219.1| lysyl-tRNA synthetase (class II) [uncultured Gemmatimonadales
           bacterium HF0200_34B24]
 gi|297171326|gb|ADI22331.1| lysyl-tRNA synthetase (class II) [uncultured actinobacterium
           HF0500_01C15]
          Length = 512

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 85/410 (20%), Positives = 151/410 (36%), Gaps = 42/410 (10%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           + S G L     G+  RL G V   R  G  +F  + D  G  QV    D    E  +++
Sbjct: 50  SESTGSLSDKGYGNVERLGGRVVSWRDMGKSLFAHLEDGQGRVQVYFRKDVLGDEEYEAL 109

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY----- 120
               +    G       E       +G++ + A+  ++L+ +         E +      
Sbjct: 110 DLLDLGDWIGT------EGNMFRTRSGEVTIRAKSWKLLTKSLRPLPFGKVETDAQTGQR 163

Query: 121 -------PESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                   + +R++ R+ DL     + +    R+R+I S+R  + ++ F+E  TP+L   
Sbjct: 164 VVHSGFADQEMRYRQRYADLAVNPEVREVFRLRSRVITSLRGFLDSQGFLEVETPVLQPL 223

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A    V           L  A + Y + L+  G DR ++I+  FR+E       P 
Sbjct: 224 YGGAAAKPFVTEHNALSQTMYLRVADELYLKRLIVGGLDRVYEISKDFRNEGLSRYHNP- 282

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   +F + D  +  +E +L+ V +E   G +V      I +D    R G     
Sbjct: 283 EFTMLEWYQAFTDYDSQMQLVEQMLQHVLDEVVGGRSVMLGETEINFDGRFDRLG----- 337

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN-EWARSQ 351
                ++ +++E        +  K L      E   IP   G G     D++  E     
Sbjct: 338 -----LIDSLSEALGTDVHTMDQKALRSK--AEELQIPDLEGAGTGKLIDKLFGELVE-- 388

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
             P L    + +D    +    P+AK         +  R ++  G +  F
Sbjct: 389 --PSLVQPTFVVDHPKEL---SPLAKEHRSD--PRLTERFELYIGGAEVF 431



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 27/168 (16%)

Query: 402 IAGDPLKFCSFAADARNHIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF 459
              + L+           +  +L   ++  +  +  +++D                 +P 
Sbjct: 360 SKAEELQIPDLEGAGTGKLIDKLFGELVEPSLVQPTFVVD-----------------HPK 402

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
            +     E    +D       +++L   G E+ +G    +        F      +   +
Sbjct: 403 ELSPLAKEHR--SDPR--LTERFELYIGGAEVFNGFSELNDPIDQRSRFETQMSLRAAGD 458

Query: 520 NRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                      RA + GMPP GG+  G+DR VM+L   +++R+V LFP
Sbjct: 459 EEAHEIDEDYIRALEYGMPPTGGVGMGVDRFVMVLANQQSIRDVILFP 506


>gi|156973279|ref|YP_001444186.1| lysyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166230600|sp|A7MXL2|SYK_VIBHB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|156524873|gb|ABU69959.1| hypothetical protein VIBHAR_00960 [Vibrio harveyi ATCC BAA-1116]
          Length = 510

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 63/287 (21%), Positives = 125/287 (43%), Gaps = 29/287 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIAKSVRSEWVLCIDGLVM 78
           V ++G +   R      FL I++  G  Q  A+        E  + +    ++ + G + 
Sbjct: 73  VAIAGRIMAKRGP----FLVIQETSGRIQAYADKAVQKVLKEKYQGLDIGDIIGVKGALH 128

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                        G + ++ ++ E+L+ A   PLP        + +R++ R++DL  +  
Sbjct: 129 KSGK---------GDLYVNMEEFELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNED 178

Query: 139 HKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
            +   V R+++++++R  MI + F+E  TP++        AR F+          Y L  
Sbjct: 179 SRQAFVVRSKVMSAIRNFMITKQFMEVETPMMHVIPGGASARPFITHHNALDMPMY-LRI 237

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  ++++  E +
Sbjct: 238 APELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKELMDLTEEL 296

Query: 257 LRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
           L  V  E     ++            + R+   +AI+ Y  D   ++
Sbjct: 297 LSSVALEVLGSTSMPYGDDTVEFGGTYTRMSMFEAIKHYNPDHAQIQ 343



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 386 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 445

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 446 KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504


>gi|254447176|ref|ZP_05060643.1| lysyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198263315|gb|EDY87593.1| lysyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 500

 Score =  187 bits (476), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 60/291 (20%), Positives = 124/291 (42%), Gaps = 24/291 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            +++ G    ++G +   R    +    I+D  G  QV  +  +   +    +++  +  
Sbjct: 61  SLAESGERAAVAGRLVLDRNAFKV----IQDVSGRIQVYVDRKTLPKDKLAEIKAWDLGD 116

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G+      E        G + +S ++ E+L+ +   PLP   +       R++ R++D
Sbjct: 117 IVGV------EGTLQRSGKGDLYVSMERAELLTKSLR-PLPDKHKGLSDTEQRYRQRYVD 169

Query: 133 LRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   + + + R++II  +R  +   +F E  TP++        AR F+         
Sbjct: 170 LIVNEESRKVFRLRSQIIQYIRRYLDGRDFQEVETPMMQVIPGGATARPFVTHHNALDMD 229

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R ++I   FR+E   +   P EF  L+   ++ +  D++
Sbjct: 230 LY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGLSTRHNP-EFTMLEFYQAYADYHDLM 287

Query: 251 NTMENVLRGVFEEFSN---------GNTVSNNFLRICYDDAIRRYGTDKPD 292
           +  E++LRG+ E+                   F R+   ++I  +  D  +
Sbjct: 288 DLTESMLRGIAEDVIGSTTIEAEGEQYDFEKAFARMTVKESILHFNRDISE 338



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 64/160 (40%), Gaps = 7/160 (4%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                AR+ +A+ LGI   + +    +     +E   E  ++         P       +
Sbjct: 342 DDLDSARS-LAERLGIPLKDSYGLGKV-QIEIFEKTVE-HRLMQPTFITEYPTEVSPLAR 398

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----Y 526
             D       +++    G E+A+G    + +E   + F      K+  ++          
Sbjct: 399 RLDANPFVTERFEFFVGGREVANGFSELNDAEDQAERFKAQVAEKDAGDDEAMHYDADYI 458

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           RA + G+PP  G   GIDR+VML   + ++R+V LFP  +
Sbjct: 459 RALEYGLPPTAGEGIGIDRLVMLFTDSASIRDVLLFPHMR 498


>gi|227903177|ref|ZP_04020982.1| lysyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227868982|gb|EEJ76403.1| lysyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 516

 Score =  187 bits (476), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 66/332 (19%), Positives = 121/332 (36%), Gaps = 25/332 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +++G +   R  G + F DI D  G  Q+    D    E  K  +   +    G+     
Sbjct: 62  KVAGRMLAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYKIFKKSDIGDFLGI----- 116

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E       TG++ + A  +  LS A   PLP            ++ R+LDL  +     
Sbjct: 117 -EGEVMKTDTGELTIRALHVTFLSKALR-PLPDKYHGLKDVEAIYRQRYLDLITNRDSYM 174

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
               RT+II ++R  +  ++F+E  TP+L        AR F+          Y +  A +
Sbjct: 175 RFVHRTQIIQAIRDYLNKQDFMEVETPVLHNIPGGAEARPFITHHNALDIDLY-MRIALE 233

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  E ++R 
Sbjct: 234 LPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELETYAAYWDFHDVMDEAEGIIRA 292

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
             +                 D  I   GTD  DL  P    ++ +         F K ++
Sbjct: 293 AAKVV-------------SPDGKITYQGTD-IDLGKPFRRVHMVDLIKEKTGVDFWKPMT 338

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
                ++                 +N +    
Sbjct: 339 DEEAKKIAEEHDIHCESYWKVGHVINAFFEKY 370



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 114/349 (32%), Gaps = 28/349 (8%)

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVL-RGVFEEF-----SNGNTVSNNFLRICYDDA 282
           R        D  M FV +  I+  + + L +  F E       N    +     I + +A
Sbjct: 162 RYLDLITNRDSYMRFVHRTQIIQAIRDYLNKQDFMEVETPVLHNIPGGAEARPFITHHNA 221

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +      +  L  P+    V +     E     +   ++  +       +       F D
Sbjct: 222 LDIDLYMRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNPEFTELETYAAYWDFHD 281

Query: 343 RMNEWARSQGQPGLAYIFWRLDE-SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
            M+E        G+     ++    G +   G             +   +  + G   + 
Sbjct: 282 VMDE------AEGIIRAAAKVVSPDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVDFWK 335

Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
              D              IA+E  I   + ++   +++  F+E   EE  +D        
Sbjct: 336 PMTDEEA---------KKIAEEHDIHCESYWKVGHVINA-FFEKYCEETIVDPTFVYGHP 385

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
            +    + K  D       ++++   G E  +     +  +     F      ++   + 
Sbjct: 386 VEISPLAKKNAD-DPRFTDRFEIYIMGEEYGNAFSELNDPDDQRARFEAQMAERDAGNDE 444

Query: 522 FG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                    RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 445 ADMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 493


>gi|161723246|ref|YP_096294.2| asparaginyl-tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 467

 Score =  187 bits (476), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 66/392 (16%), Positives = 123/392 (31%), Gaps = 53/392 (13%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           G++    +   V + GWV   R    G+ F+ + D    + +            K V   
Sbjct: 13  GEIS---IDETVTVRGWVKTRRDSKAGLSFISLHDGSCFSPIQIVATDQLSNYHKEVTK- 68

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
                 G  M  + + + +       E+ A+ IE++   E         + +      + 
Sbjct: 69  ---LTAGCSMIATGKLVASQGKGQFFEIQAESIEVVGWVENPDTYPIQAKRHTLEFLREV 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +T+      R  +  ++      + F    TPI+TAS  EGA +    S ++ 
Sbjct: 126 AHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEGAGEMFRVSTLDL 185

Query: 189 --------------GSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+          Q           + +   P FR E+  + R  
Sbjct: 186 LNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMSKVYTFGPTFRAENSNTSRHL 245

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTV 270
            EF+ ++ E++F   +DI    +N+LR + +                          +  
Sbjct: 246 AEFWMIEPEIAFANLEDICKLSQNMLRYLCKTVLEERADDMDFFNQFVAPGCIERMEHIA 305

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            + F  + Y DAI+           P+   +   +EH  +      +++L   P      
Sbjct: 306 DSEFEIMTYTDAIKALEASDQKFEFPVSWGLDLQSEHERY-----LAEVLCKKPVIVTNY 360

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                G   R   D     A     PG+  I 
Sbjct: 361 PQEIKGFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 6/100 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    E++ +      ++K      +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEILDRRMDECNLNK----EHYQWYRDLRR 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G  PH G   G +R++  + G  NVR+V  FP +    D
Sbjct: 427 YGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRTPGHAD 466


>gi|257055673|ref|YP_003133505.1| lysyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256585545|gb|ACU96678.1| lysyl-tRNA synthetase (class II) [Saccharomonospora viridis DSM
           43017]
          Length = 499

 Score =  187 bits (476), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 69/314 (21%), Positives = 128/314 (40%), Gaps = 28/314 (8%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RT + G +             G  V ++G V   R  G + F  IRD  G  Q++ + D 
Sbjct: 40  RTTTIGQVRERHGDLEPDHHTGERVSITGRVMLYRTGGKLCFATIRDASGQIQIMLSLDK 99

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E  +S +S+  L   G  +  + E I +    G++ +   +  + S A   PLP   
Sbjct: 100 VGAESLQSWKSDIDL---GDHVGVTGEVITSK--RGELSVLVDEWRLTSKALR-PLPEKH 153

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSP 174
           +       R + R++DL  +   + +V+ R   + ++R  ++   F+E  TP+L      
Sbjct: 154 KGLTDPEARVRQRYVDLIVNPEARQMVRHRAATLQALRSGLLERGFLEVETPMLHLVHGG 213

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F           Y L  AP+ + + L+  G ++ F+I   FR+E   S   P EF
Sbjct: 214 ATARPFTTHINAYDLDLY-LRIAPELFLKRLVVGGMEKVFEINRSFRNEGADSTHNP-EF 271

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN----------TVSNNFLRICYDDAIR 284
             L+  M++ + +D +   ++++R   E                 +S ++ +I    ++ 
Sbjct: 272 TMLEWYMAYGDYNDGMGVTQDLMRRAAEAVFGDTVVRNPKYGEVDLSGDWPQITLYGSVS 331

Query: 285 RYGTDKPDLRNPII 298
                +   R PI 
Sbjct: 332 EALDAEITPRTPIE 345



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 28/157 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                H+ +EL  +     +  ++ D+P      E   +   H               +D
Sbjct: 365 GKLVEHLFEEL--VEHTLIQPTFVRDYPL-----ETSPLTRQHR--------------DD 403

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
            L +   ++DL+  G E+ +            +  +   +     +           RA 
Sbjct: 404 PLLV--EKWDLIGFGMELGTCFSELIDPVEQRRRLTEQSLLAADGDPEAMQLDEDFLRAL 461

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP  G+  GIDR++M   G K +RE  LFPM +
Sbjct: 462 EYGMPPTVGVGMGIDRLLMAFTG-KGIRETILFPMVK 497


>gi|19703801|ref|NP_603363.1| lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|39932224|sp|Q8RG52|SYK_FUSNN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|19713947|gb|AAL94662.1| Lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 493

 Score =  187 bits (476), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 60/314 (19%), Positives = 125/314 (39%), Gaps = 16/314 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + +G +  +R  G + F  I D  G  Q+    D    E    +     +   G ++   
Sbjct: 57  KTAGRIMSLRGKGKVYFAHIEDQSGKIQIYIKKDELGEEQFDHIVKMLNV---GDIIGLE 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
            E    +  T ++ L  + I +L+      LP          IR++ R++DL  +  + +
Sbjct: 114 GELFITH--TEELTLRVKSIALLTK-NVRSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRE 170

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQ 199
             +KRT+II ++R  +    F+E  TPI+        A+ F+          + L  AP+
Sbjct: 171 TFIKRTKIIKAIRKYLDDRGFLEVETPIMHPILGGAAAKPFITHHNTLNIDLF-LRIAPE 229

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R + +   FR+E   +   P EF  +++  +  + +D+++  E ++  
Sbjct: 230 LYLKKLIVGGFERVYDLNRNFRNEGISTRHNP-EFTMVELYQAHADFNDMMDLCEGIISS 288

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP------DLRNPIIMHNVTEHFVHSEFRV 313
           V +E +    +  + +++   +  R +  D        D    +      +        V
Sbjct: 289 VCQEINGTTDIEYDGVQLSLKNFNRVHMVDMIKEVTGVDFWKEMTFEEAKKLAKEHHVEV 348

Query: 314 FSKILSVNPGYEVW 327
              + SV      +
Sbjct: 349 ADHMNSVGHIINEF 362



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + +  D  +    +++L  N  E A+     +  
Sbjct: 362 FFEQKCEEKVIQPTFVYGHPVEISPLAKRNEDNPNF-TDRFELFINKREYANAFTELNDP 420

Query: 502 EVM-----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                    Q    +  ++E           A + G+PP GG+  GIDR+VMLL GA ++
Sbjct: 421 ADQRGRFEAQVEEAMRGNEEATPEIDESFVEALEYGLPPTGGMGIGIDRLVMLLTGAPSI 480

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 481 RDVILFPQMK 490


>gi|260775419|ref|ZP_05884316.1| lysyl-tRNA synthetase (class II) [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608600|gb|EEX34765.1| lysyl-tRNA synthetase (class II) [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 505

 Score =  187 bits (476), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 66/326 (20%), Positives = 137/326 (42%), Gaps = 36/326 (11%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H  GDL             ++   V ++G V   R      FL I++  G  Q  A  
Sbjct: 42  REHLAGDLQAEFGEKTKEELEELNHVVAIAGRVMAKRGP----FLAIQETSGRIQAYAAK 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     + K ++ ++     G ++        +    G + ++ +  E+L+ A   PLP 
Sbjct: 98  D-----VQKELKEKYQGLDIGDIIGVKGALHKSG--KGDLYVNMESYELLTKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R++DL  +   +   + R+++++++R  M ++ ++E  TP++    
Sbjct: 150 KFHGLTDQEMRYRQRYVDLIVNQDSREAFIIRSKLVSAIRNFMSSKGYLEVETPMMHVIP 209

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   
Sbjct: 210 GGATARPFITHHNALDIDMY-LRVAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNP 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  ++   ++ +  D+++  E +L  V  +     ++            + R+   +AI
Sbjct: 268 EFTMMEFYQAYSDYKDLMDLTEEMLSTVAMDVLGSTSMPYGDETVEFGGKYARMSMFEAI 327

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHS 309
           + Y  +  +++  +   ++T      
Sbjct: 328 KHYNPEHAEIQA-LTEQDLTNRDKMV 352



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E ++         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 381 EPQLIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 440

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                +K+  ++           A + G+PP  G   GIDR+ ML      +R+V LFP
Sbjct: 441 KAQVDAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFP 499


>gi|167753186|ref|ZP_02425313.1| hypothetical protein ALIPUT_01457 [Alistipes putredinis DSM 17216]
 gi|167659500|gb|EDS03630.1| hypothetical protein ALIPUT_01457 [Alistipes putredinis DSM 17216]
          Length = 462

 Score =  187 bits (476), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 59/281 (20%), Positives = 109/281 (38%), Gaps = 27/281 (9%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSEWVLCIDGLV 77
            V + GWV   R +  + F+ + D   +  +    D A F  E+ + V +   L +DG +
Sbjct: 18  EVVVKGWVRTKRGNKNVAFIALNDGSCVANMQVVVDLAKFDEELLRKVTTGACLRVDGRL 77

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           ++              +E+ A+KIEI   A+    P+  +    E +R    +L  R +T
Sbjct: 78  VASCGAG-------QGVEVQAEKIEIYGTADPETYPLQKKGHSLEFLR-DIAYLRPRTNT 129

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-------- 189
                  R  +  ++      + F    TP++TAS  EGA      + ++          
Sbjct: 130 FGAIFRIRHAMAYAIHKYFNDKGFYYLHTPLITASDCEGAGAMFQVTTLDLNNLPKTEEG 189

Query: 190 ------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+  P       Q +  L A    + +   P FR E+  + R   EF+ ++ E
Sbjct: 190 AVDYSQDFFGRPCSLTVSGQLEGELGALSLGQIYTFGPTFRAENSNTPRHLSEFWMIEPE 249

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
           M+F E +D +   E+ L+ +             F+   +D+
Sbjct: 250 MAFYELEDNMELAEDFLKYLIRYALENCREDLEFMNKMWDN 290



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L     EI  G  R    E +      +G++++ +           + G  PH G   G 
Sbjct: 379 LFPKIGEIIGGSEREADYEKLSARVHELGMNEKELW----WYLDTRRWGSAPHSGFGLGF 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+++ + G  N+R+V  FP +  
Sbjct: 435 ERLLLFVTGMGNIRDVIPFPRTPK 458


>gi|113969171|ref|YP_732964.1| lysyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|114048687|ref|YP_739237.1| lysyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|117921734|ref|YP_870926.1| lysyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|123029921|sp|Q0HM10|SYK_SHESM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123030336|sp|Q0HRS5|SYK_SHESR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229829|sp|A0L0F1|SYK_SHESA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|113883855|gb|ABI37907.1| lysyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|113890129|gb|ABI44180.1| lysyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|117614066|gb|ABK49520.1| lysyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 500

 Score =  187 bits (476), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 65/311 (20%), Positives = 129/311 (41%), Gaps = 35/311 (11%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   +L              +G    ++G +   R      FL I+D  G  Q  A  
Sbjct: 37  RTHKAAELQEKYGQNTKEELEALGFKTSIAGRIMAKRGP----FLVIQDVSGRIQAYAEK 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                     ++  +     G ++  + +   +    G + ++ ++ ++L+ A   PLP 
Sbjct: 93  GVQA-----DLKDRYQGLDIGDIIGVTGQLHLSG--KGDLYVNMEEYQLLTKALR-PLPE 144

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R++DL  +   +   V R++++ ++R  MI + F+E  TP++    
Sbjct: 145 KFHGLTDQETRYRQRYVDLIVNEESRQAFVMRSKVVAAIRNFMIKKEFMEVETPMMHVIP 204

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 205 GGASARPFITHHNALDMPMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNP 262

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  ++  M++ +  D+++  E +L  +  E      +            + R+   +AI
Sbjct: 263 EFTMMEFYMAYADYKDLMDLTEELLSSIAIELLGSAQMPYGEHTVDFGGPYARLSMLEAI 322

Query: 284 RRYGTDKPDLR 294
           ++Y  D   ++
Sbjct: 323 QKYNPDNATIQ 333



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 6/122 (4%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML 505
           E  +       F        S     ND       +++    G E+A+G    + +E   
Sbjct: 373 ETAEWQLMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVANGFSELNDAEDQD 432

Query: 506 QAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
             F     +K+  ++           A + G+PP  G   GIDR+VML      +R+V L
Sbjct: 433 SRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 562 FP 563
           FP
Sbjct: 493 FP 494


>gi|206972146|ref|ZP_03233094.1| aspartyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|229079384|ref|ZP_04211926.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229178583|ref|ZP_04305947.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|206733069|gb|EDZ50243.1| aspartyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228604741|gb|EEK62198.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228703917|gb|EEL56361.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 432

 Score =  187 bits (476), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 5   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++  
Sbjct: 60  ---KVDVESVVHVIGEIVETSKTEL-------GVEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     ++  
Sbjct: 297 GDLDTEGEKLLGKYVKEIYNSEFVFITHYP-----------KKARPMYTMPNKENPAITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 426


>gi|58336620|ref|YP_193205.1| lysyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|58253937|gb|AAV42174.1| lys-tRNA synthetase lysrs [Lactobacillus acidophilus NCFM]
          Length = 516

 Score =  187 bits (476), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 66/332 (19%), Positives = 121/332 (36%), Gaps = 25/332 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +++G +   R  G + F DI D  G  Q+    D    E  K  +   +    G+     
Sbjct: 62  KVAGRMLAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYKIFKKSDIGDFLGI----- 116

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E       TG++ + A  +  LS A   PLP            ++ R+LDL  +     
Sbjct: 117 -EGEVMKTDTGELTIRALHVTFLSKALR-PLPDKYHGLKDVEAIYRQRYLDLITNRDSYM 174

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
               RT+II ++R  +  ++F+E  TP+L        AR F+          Y +  A +
Sbjct: 175 RFVHRTQIIQAIRDYLNKQDFMEVETPVLHNIPGGAEARPFITHHNALDIDLY-MRIALE 233

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  E ++R 
Sbjct: 234 LPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELETYAAYWDFHDVMDEAEGIIRA 292

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
             +                 D  I   GTD  DL  P    ++ +         F K ++
Sbjct: 293 AAKVV-------------SPDGKITYQGTD-IDLGKPFRRVHMVDLIKEKTGVDFWKPMT 338

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
                ++                 +N +    
Sbjct: 339 DEEAKKIAEEHDIHCESYWKVGHVINAFFEKY 370



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 114/349 (32%), Gaps = 28/349 (8%)

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVL-RGVFEEF-----SNGNTVSNNFLRICYDDA 282
           R        D  M FV +  I+  + + L +  F E       N    +     I + +A
Sbjct: 162 RYLDLITNRDSYMRFVHRTQIIQAIRDYLNKQDFMEVETPVLHNIPGGAEARPFITHHNA 221

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +      +  L  P+    V +     E     +   ++  +       +       F D
Sbjct: 222 LDIDLYMRIALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNPEFTELETYAAYWDFHD 281

Query: 343 RMNEWARSQGQPGLAYIFWRLDE-SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
            M+E        G+     ++    G +   G             +   +  + G   + 
Sbjct: 282 VMDE------AEGIIRAAAKVVSPDGKITYQGTDIDLGKPFRRVHMVDLIKEKTGVDFWK 335

Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
              D              IA+E  I   + ++   +++  F+E   EE  +D        
Sbjct: 336 PMTDEEA---------KKIAEEHDIHCESYWKVGHVINA-FFEKYCEETIVDPTFVYGHP 385

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
            +    + K  D       ++++   G E  +     +  +     F      ++   + 
Sbjct: 386 VEISPLAKKNAD-DPRFTDRFEIYIMGEEYGNAFSELNDPDDQRARFEAQMAERDAGNDE 444

Query: 522 FG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                    RA + GMPP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 445 ADMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 493


>gi|327403364|ref|YP_004344202.1| Lysyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327318872|gb|AEA43364.1| Lysyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 566

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 57/276 (20%), Positives = 114/276 (41%), Gaps = 11/276 (3%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           + G  V L+G +   R  G   F +I+D  G  QV  N D  C    K + ++       
Sbjct: 46  EEGKQVCLAGRLMSQRVMGKASFGEIQDSEGRIQVYFNRDEICPGEDKMLYNDLFKKWLD 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKY 128
           L      +        G++ ++ ++  +LS + +       + +           +R++ 
Sbjct: 106 LGDFIGVKGEVFKTQVGEVSVNVKEFTLLSKSLKPLPTPRTDADGKVHDAFTNPELRYRQ 165

Query: 129 RFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R++DL  +   +   VKRT++ ++MR       ++E  TPIL A      AR F+     
Sbjct: 166 RYVDLVVNPQVREVFVKRTKLFSAMRNFFNDAGYMEVETPILQAIPGGAAARPFITHHNA 225

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +S+ + 
Sbjct: 226 LDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVSYKDY 283

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           + +++  E +L       +  +  + N   I +   
Sbjct: 284 NWMMDFTERLLEHCAIAVNGTSECTFNEHNISFKAP 319



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 5/123 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 375 EGNYIQPTFITDYPKEMSPLCKTHRDNPELTERFELMVCGKEIANAYSELNDPIDQRERF 434

Query: 509 SNVGISKEVVENRFGG-----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +     E  ++   G       RA + GMPP  G+  G+DR++M L    +++EV  FP
Sbjct: 435 EDQVRLAEKGDDEATGMIDQDFLRALEYGMPPTSGLGIGMDRLIMYLTNNPSIQEVLFFP 494

Query: 564 MSQ 566
             +
Sbjct: 495 QMR 497


>gi|228958486|ref|ZP_04120206.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228801113|gb|EEM48010.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 432

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 5   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
           I      E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++  
Sbjct: 61  I----DVESVVHVIGEIVETSKTEL-------GVEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDL 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 63/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     ++  
Sbjct: 297 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTMPNKENPAITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+       +F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----EKFQSYLNTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|124003298|ref|ZP_01688148.1| lysyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123991396|gb|EAY30827.1| lysyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 582

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 62/328 (18%), Positives = 131/328 (39%), Gaps = 21/328 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F +++D  G  Q+  N D  C    KS  +     +  L  
Sbjct: 61  KQVSVAGRLMSRRIQGKAGFAELQDSQGRVQIYMNRDEICPGEDKSYYNNVYKKLVDLGD 120

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKYRFL 131
               +       TG++ +   +  +L+ A +       + +           +R++ R++
Sbjct: 121 ILGVKGYVFKTQTGELSIWVTEYILLTKAIKPLPQPKTDEDGKVHDAFTDPELRYRQRYV 180

Query: 132 DLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +   ++  +KRT+++N+MR  +  + ++E  TPIL        AR F         
Sbjct: 181 DLVVNPQVRDTFIKRTKLVNTMRDYLNDKGYLEVETPILQPLYGGAAARPFKTHHNTLDM 240

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           + Y L  A + Y + L+  GFD  ++ +  FR+ +  S     EF Q+++ +++ + + +
Sbjct: 241 TLY-LRIANELYLKRLIVGGFDGVYEFSKDFRN-EGMSRFHNPEFTQVELYVAYKDYEWM 298

Query: 250 LNTMENVLRGVFEEF---------SNGNTVSNNFLRICYDDAIRRY-GTDKPDLRNPIIM 299
           +N +E ++  V             +N       + R    +AI  + G D  ++    + 
Sbjct: 299 MNLVEEMVEKVAIALHGTTEVQVGANTINFQRPWKRYTMFEAIEHFTGIDISEMNEDQLR 358

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVW 327
               +  V ++  +    L      E  
Sbjct: 359 ETCKKLDVETDPSMGKGKLIDEIFGEKC 386



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 46/122 (37%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +         P       K +        +++ + NG EI +     +      Q F
Sbjct: 387 EGSLIQPTFITNYPVEMSPLAKSHRDKPGLVERFEAIANGKEICNAFSELNDPLDQRQRF 446

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +     +  ++          RA + GMPP  G+  GIDR+ M++  +  ++EV  FP 
Sbjct: 447 EDQVNLGKRGDDEAMTLDEDFLRALEYGMPPTAGLGIGIDRLSMIMTNSSTIQEVLFFPQ 506

Query: 565 SQ 566
            +
Sbjct: 507 MR 508


>gi|148545090|ref|YP_001272460.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184154423|ref|YP_001842764.1| asparaginyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|166980089|sp|A5VMP9|SYN_LACRD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|226695298|sp|B2GA02|SYN_LACRJ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148532124|gb|ABQ84123.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183225767|dbj|BAG26284.1| asparaginyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
          Length = 432

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 71/355 (20%), Positives = 132/355 (37%), Gaps = 26/355 (7%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           T +  ++    VG  V++  W+   R  G I FL +RD  G  Q +   +    E   S 
Sbjct: 3   TITISEV-PKHVGETVKIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNDVSEEKFDSA 61

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           + +        V    AE   +       E+  +  +I+  +E+ P    G +E+     
Sbjct: 62  KHDLHQETSFWVTGEIAEDKRSKF---GYEIHIKDFDIVGESEDYP---IGNKEHGIDFL 115

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R+R+  +         F +   P LT S+PEG  +      
Sbjct: 116 LDNRHLWLRSRKPWALMRIRSRVKLATMEFFEKHGFTQFDAPELTGSAPEGTTELFETDY 175

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ +F  L Q+ Q Y     A    R + + P FR E  ++ R   EF+ ++ EM+++ 
Sbjct: 176 FDRSAF--LSQSGQLY-AEAGAMALGRVYTMGPTFRAEKSKTRRHLMEFWMIEPEMAWMH 232

Query: 246 QDDILNTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTD 289
           QD+ L   E  +  + ++  +                       + RI Y +AI      
Sbjct: 233 QDESLKIQEQYIAYLVQDLIDHCARELEMVGRSVESLKPFTELPYPRITYKEAIEILQKG 292

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
             D+       +  E ++  +F+    IL+     + + +P       +  C  +
Sbjct: 293 GFDVEYGADFGSPEETYLADQFQKPVFILNYPKEIKAFYMPEDPEDSRQVICADL 347



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 22/139 (15%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +I+++P     +E K      +P          +   DLL+ + +         EI 
Sbjct: 316 KPVFILNYP-----KEIKAFYMPEDP-----EDSRQVICADLLAPEGYG--------EII 357

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R++  E +       G+SK      +G      + G  PH G   G++R +  +  
Sbjct: 358 GGSERSYDYEYITNKLEENGLSK----EDYGWYDDLRKYGSIPHSGFGMGLERFLAWITL 413

Query: 553 AKNVREVSLFPMSQNFCDL 571
             ++RE   FP   N  + 
Sbjct: 414 QDHIRETIPFPRMLNRLNP 432


>gi|301062195|ref|ZP_07202877.1| asparagine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300443707|gb|EFK07790.1| asparagine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 463

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 71/379 (18%), Positives = 121/379 (31%), Gaps = 51/379 (13%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           RT     L    VG+ V ++GWV   R   GG  F++I D   +  +    D        
Sbjct: 3   RTRISEVLKSDAVGTHVTVAGWVRTRRDSKGGFSFIEINDGSALQGLQIVADQD----LS 58

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           + RS  +    G  ++     +++     ++EL A  I +L  A+    P+  +R   E 
Sbjct: 59  NYRSHVLRLQTGCSVTAEGTLVSSPGKGQKVELKADTIHVLGWADPESYPLQKKRHSFEF 118

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R     L  R +T       R     ++      + F+   TPILT S  EGA +    
Sbjct: 119 LRG-IAHLRPRTNTFGAVARVRNAAAFAIHRFFQEKGFLYIHTPILTGSDCEGAGEMFRV 177

Query: 184 SRVNQ-------------GSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           + ++                F+  P       Q +  + A      +   P FR E+  +
Sbjct: 178 TTLDPASVPLKNGGADYSQDFFCGPSHLTVSGQLEAEIYALAVGDVYTFGPTFRAENSNT 237

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN--------------- 272
            R   EF+ ++ EM+F +    +      L+ VF                          
Sbjct: 238 SRHLAEFWMVEPEMAFCDLKGNVTLAVEFLKYVFAHVLEHCVEDMAFFNRFIDKSVIRTL 297

Query: 273 ------NFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGY 324
                  F  + Y +AI+           P+        EH  +   +VF          
Sbjct: 298 ERLVNQEFKTLTYTEAIKLLEKAGTHFEFPVAWGGDIQAEHERYLCEKVF------EGPV 351

Query: 325 EVWAIPAKGGGGNRAFCDR 343
            +   P           D 
Sbjct: 352 VLIDYPKDIKAFYMKMNDD 370



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 4/83 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    E++    + +G   +             + G  PH G   G 
Sbjct: 380 LVPRIGEIIGGSQREDDYELLHSRITQMGFDPKDYW----WYLDLRKFGSVPHSGFGLGF 435

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           +R++  + G  N+R+V  FP + 
Sbjct: 436 ERLIQFVTGLSNIRDVIPFPRTP 458


>gi|120597726|ref|YP_962300.1| lysyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|146294137|ref|YP_001184561.1| lysyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166229828|sp|A4Y9X9|SYK_SHEPC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166230589|sp|A1RGF1|SYK_SHESW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|120557819|gb|ABM23746.1| lysyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|145565827|gb|ABP76762.1| lysyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|319427480|gb|ADV55554.1| lysyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 500

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 65/311 (20%), Positives = 129/311 (41%), Gaps = 35/311 (11%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   +L              +G    ++G +   R      FL I+D  G  Q  A  
Sbjct: 37  RTHKAAELQEKYGQNTKEELEALGFRTSIAGRIMAKRGP----FLVIQDVSGRIQAYAEK 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                     ++  +     G ++  + +   +    G + ++ ++ ++L+ A   PLP 
Sbjct: 93  GVQA-----DLKDRYQGLDIGDIIGVTGQLHLSG--KGDLYVNMEEYQLLTKALR-PLPE 144

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R++DL  +   +   V R++++ ++R  MI + F+E  TP++    
Sbjct: 145 KFHGLTDQETRYRQRYVDLIVNEESRQAFVMRSKVVAAIRNFMIKKEFMEVETPMMHVIP 204

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 205 GGASARPFITHHNALDMPMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNP 262

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  ++  M++ +  D+++  E +L  +  E      +            + R+   +AI
Sbjct: 263 EFTMMEFYMAYADYKDLMDLTEELLSSIAIELLGSAQMPYGEHTVDFGGPYARLSMLEAI 322

Query: 284 RRYGTDKPDLR 294
           ++Y  D   ++
Sbjct: 323 QKYNPDNATIQ 333



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 6/122 (4%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML 505
           E  +       F        S     ND       +++    G E+A+G    + +E   
Sbjct: 373 ETAEWQLMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVANGFSELNDAEDQD 432

Query: 506 QAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
             F     +K+  ++           A + G+PP  G   GIDR+VML      +R+V L
Sbjct: 433 SRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 562 FP 563
           FP
Sbjct: 493 FP 494


>gi|260771796|ref|ZP_05880714.1| lysyl-tRNA synthetase (class II) [Vibrio metschnikovii CIP 69.14]
 gi|260613088|gb|EEX38289.1| lysyl-tRNA synthetase (class II) [Vibrio metschnikovii CIP 69.14]
          Length = 510

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 67/312 (21%), Positives = 133/312 (42%), Gaps = 37/312 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSEWVL 71
           +  +   V ++G V   R      FL I++  G  Q  A+        E  + +    ++
Sbjct: 66  LEALNHVVSIAGRVMAKRGP----FLVIQETSGRIQAYADKTVQAELKEKYQGLDIGDII 121

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G + ++ ++ E+L+ A   PLP        + +R++ R++
Sbjct: 122 GVKGALHKSGK---------GDLYVNIEQYELLTKALR-PLPEKFHGLTDQEMRYRQRYV 171

Query: 132 DLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +   +   V R+++++++R  M ++ F+E  TP++        AR F+        
Sbjct: 172 DLIVNEDSRQAFVIRSKVMSAIRNFMTSKQFMEVETPMMHVIPGGASARPFITHHNALDM 231

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+
Sbjct: 232 PMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDL 289

Query: 250 LNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKP--------D 292
           ++  E +L  V  E     ++            + R+   +AI+ Y             D
Sbjct: 290 MDFTEELLSTVALEVLGSTSMPYGDETVEFGGKYARMSMFEAIKHYNPQHAQIQALTEDD 349

Query: 293 LRNPIIMHNVTE 304
           L+N  +M ++ +
Sbjct: 350 LQNRDLMVSIAK 361



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 386 EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 445

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +   +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP
Sbjct: 446 KSQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFP 504


>gi|227364245|ref|ZP_03848340.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325683447|ref|ZP_08162963.1| asparagine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|227070727|gb|EEI09055.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324977797|gb|EGC14748.1| asparagine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 448

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 71/355 (20%), Positives = 132/355 (37%), Gaps = 26/355 (7%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           T +  ++    VG  V++  W+   R  G I FL +RD  G  Q +   +    E   S 
Sbjct: 19  TITISEV-PKHVGETVKIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNDVSEEKFDSA 77

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           + +        V    AE   +       E+  +  +I+  +E+ P    G +E+     
Sbjct: 78  KHDLHQETSFWVTGEIAEDKRSKF---GYEIHIKDFDIVGESEDYP---IGNKEHGIDFL 131

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R+R+  +         F +   P LT S+PEG  +      
Sbjct: 132 LDNRHLWLRSRKPWALMRIRSRVKLATMEFFEKHGFTQFDAPELTGSAPEGTTELFETDY 191

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ +F  L Q+ Q Y     A    R + + P FR E  ++ R   EF+ ++ EM+++ 
Sbjct: 192 FDRSAF--LSQSGQLY-AEAGAMALGRVYTMGPTFRAEKSKTRRHLMEFWMIEPEMAWMH 248

Query: 246 QDDILNTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTD 289
           QD+ L   E  +  + ++  +                       + RI Y +AI      
Sbjct: 249 QDESLKIQEQYIAYLVQDLIDHCARELEMVGRSVESLKPFTELPYPRITYKEAIEILQKG 308

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
             D+       +  E ++  +F+    IL+     + + +P       +  C  +
Sbjct: 309 GFDVEYGADFGSPEETYLADQFQKPVFILNYPKEIKAFYMPEDPEDSRQVICADL 363



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 22/139 (15%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +I+++P     +E K      +P          +   DLL+ + +         EI 
Sbjct: 332 KPVFILNYP-----KEIKAFYMPEDP-----EDSRQVICADLLAPEGYG--------EII 373

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R++  E +       G+SK      +G      + G  PH G   G++R +  +  
Sbjct: 374 GGSERSYDYEYITNKLEENGLSK----EDYGWYDDLRKYGSIPHSGFGMGLERFLAWITL 429

Query: 553 AKNVREVSLFPMSQNFCDL 571
             ++RE   FP   N  + 
Sbjct: 430 QDHIRETIPFPRMLNRLNP 448


>gi|219682909|ref|YP_002469292.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|219620559|gb|ACL28716.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
          Length = 554

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 104/568 (18%), Positives = 189/568 (33%), Gaps = 129/568 (22%)

Query: 5   RTHSCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANPDSACFEI 61
           R    G L   ++    V ++G V  +R  GG+ F+ +   D   I  +++         
Sbjct: 100 RVKYDGKLEAGAETDDIVGVAGRVLFIRNAGGLCFVQLAAGDGTTIQAMLSKKQIG---- 155

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S++    L   G  +      I +   TG++ + A +  I + A +    +   +E  
Sbjct: 156 ADSLKQFKQLVDLGDHLFVKGRVIASK--TGELSIFADEWAIAAKALQPLPTL--HKELN 211

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           E  R +  ++ +  D   +N+V+ R+R + S+R       F+E  TP+L T      AR 
Sbjct: 212 EDTRTRKPYIGMIADEKIRNMVRNRSRAVASLRRTFDEHGFLEVETPMLQTIHGGAAARP 271

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           Y L  AP+ + +  +  G ++ F+I   FR+E   +   P EF  ++ 
Sbjct: 272 FTTHMNAFDLDLY-LRIAPELFLKRCLVGGIEKVFEINRDFRNEGVDATHAP-EFTMVEA 329

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
                                 E + N +T++     +    AI  +G         + +
Sbjct: 330 Y---------------------EAYGNYDTIAKLVKELIQKTAIDVFG------STKVTL 362

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            + TE+    E+                                 +  + + GQ      
Sbjct: 363 LDGTEYDFGGEW---------------------------KTMSMYDSLSEALGQQ----- 390

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                          +    ++    AI  RL ++             +  +       H
Sbjct: 391 ---------------ITPETSVEELGAIADRLGVE-----------RDEVENH-GKLVEH 423

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +         +E  ++ DFP      E   +  AH                       
Sbjct: 424 LWEHF--YEDKLYEPTFVRDFPV-----ETSPLVKAHR----------------SKPGVV 460

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPP 535
            ++DL   GFE+A+G    +   V  + F          +            A   GMPP
Sbjct: 461 EKWDLYVRGFELATGYSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPP 520

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG+  GIDR+++ L GA  +RE   FP
Sbjct: 521 AGGMGMGIDRLLIALTGA-TIRETITFP 547


>gi|183601998|ref|ZP_02963367.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|241190485|ref|YP_002967879.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241195891|ref|YP_002969446.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|183218883|gb|EDT89525.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|240248877|gb|ACS45817.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250445|gb|ACS47384.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|295793472|gb|ADG33007.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9]
          Length = 538

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 104/568 (18%), Positives = 189/568 (33%), Gaps = 129/568 (22%)

Query: 5   RTHSCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANPDSACFEI 61
           R    G L   ++    V ++G V  +R  GG+ F+ +   D   I  +++         
Sbjct: 84  RVKYDGKLEAGAETDDIVGVAGRVLFIRNAGGLCFVQLAAGDGTTIQAMLSKKQIG---- 139

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S++    L   G  +      I +   TG++ + A +  I + A +    +   +E  
Sbjct: 140 ADSLKQFKQLVDLGDHLFVKGRVIASK--TGELSIFADEWAIAAKALQPLPTL--HKELN 195

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           E  R +  ++ +  D   +N+V+ R+R + S+R       F+E  TP+L T      AR 
Sbjct: 196 EDTRTRKPYIGMIADEKIRNMVRNRSRAVASLRRTFDEHGFLEVETPMLQTIHGGAAARP 255

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           Y L  AP+ + +  +  G ++ F+I   FR+E   +   P EF  ++ 
Sbjct: 256 FTTHMNAFDLDLY-LRIAPELFLKRCLVGGIEKVFEINRDFRNEGVDATHAP-EFTMVEA 313

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
                                 E + N +T++     +    AI  +G         + +
Sbjct: 314 Y---------------------EAYGNYDTIAKLVKELIQKTAIDVFG------STKVTL 346

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            + TE+    E+                                 +  + + GQ      
Sbjct: 347 LDGTEYDFGGEW---------------------------KTMSMYDSLSEALGQQ----- 374

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                          +    ++    AI  RL ++             +  +       H
Sbjct: 375 ---------------ITPETSVEELGAIADRLGVE-----------RDEVENH-GKLVEH 407

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +         +E  ++ DFP      E   +  AH                       
Sbjct: 408 LWEHF--YEDKLYEPTFVRDFPV-----ETSPLVKAHR----------------SKPGVV 444

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPP 535
            ++DL   GFE+A+G    +   V  + F          +            A   GMPP
Sbjct: 445 EKWDLYVRGFELATGYSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPP 504

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG+  GIDR+++ L GA  +RE   FP
Sbjct: 505 AGGMGMGIDRLLIALTGA-TIRETITFP 531


>gi|34541056|ref|NP_905535.1| lysyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|39932028|sp|Q7MUV7|SYK_PORGI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|34397371|gb|AAQ66434.1| lysyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 578

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 65/335 (19%), Positives = 122/335 (36%), Gaps = 24/335 (7%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F++++D  G  Q+    D  C    K   +  V     +  
Sbjct: 55  RQVSIAGRIMSRRIMGKATFMELQDAEGRIQIYITRDDICPGEDKEFYNTVVKKCTDIGD 114

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFKYRFLD 132
               +        G+I +  Q++  LS A      V  +             R++ R++D
Sbjct: 115 FIGVKGYVFRTQMGEISVHVQEMTFLSKAIRPLPVVKEKDGEVFDGFTDPEQRYRQRYVD 174

Query: 133 LRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  ++  K+I  KRT + NSMR       +IE  TP+L +      AR F+         
Sbjct: 175 LVVNSHVKDIFLKRTMVFNSMRSFFNECGYIEVDTPVLQSIPGGAAARPFITHHNALDIP 234

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ + + ++
Sbjct: 235 LY-LRIANELYLKRLIVGGFDGVYEFSRNFRNEGMDRTHNP-EFTAMEIYVAYKDYNWMM 292

Query: 251 NTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           N  E +L  +  +      +            + R+   +AI  +        N   +  
Sbjct: 293 NFTEQMLERICMDVLGTTQMKVGGKLIDFKAPYKRVTMIEAIHEHTGIDISGMNEAELRQ 352

Query: 302 V-----TEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           V      EH            +      + +  P 
Sbjct: 353 VCDKLGVEHNETMGKGKLIDEIFGEKCEKNYIQPT 387



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 78/231 (33%), Gaps = 43/231 (18%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGDPLKFCSFAADARNHIAQELGII 427
           +   G +           +   +    G D       +  + C       N    +  +I
Sbjct: 312 MKVGGKLIDFKAPYKRVTMIEAIHEHTGIDISGMNEAELRQVCDKLGVEHNETMGKGKLI 371

Query: 428 NC--------NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +         N  +  +I D+P     +E   +   H                +      
Sbjct: 372 DEIFGEKCEKNYIQPTFITDYP-----KEMSPLTKEHR--------------TNPE--LT 410

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPP 535
            +++L+ NG E+A+     +      + F       E  ++          RA + GMPP
Sbjct: 411 ERFELMVNGKELANAYSELNDPIDQRERFEEQLKLSEKGDDEAMYIDNDFIRALEYGMPP 470

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
             G+  G+DR+VMLL G ++++EV LFP  +         P  V+    +E
Sbjct: 471 TSGMGIGMDRLVMLLTGQESIQEVLLFPQMK---------PEKVAPRDTKE 512


>gi|260771152|ref|ZP_05880079.1| lysyl-tRNA synthetase (class II) [Vibrio furnissii CIP 102972]
 gi|260613749|gb|EEX38941.1| lysyl-tRNA synthetase (class II) [Vibrio furnissii CIP 102972]
 gi|315179242|gb|ADT86156.1| lysyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 510

 Score =  187 bits (475), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 62/292 (21%), Positives = 127/292 (43%), Gaps = 25/292 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G V   R      FL I++  G  Q  A  D     + K ++ ++    
Sbjct: 66  LEALNHIVAIAGRVMAKRGP----FLVIQETSGRIQAYAAKD-----VQKELKEKYQGLD 116

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++        +    G + ++ ++ E+L+ A   PLP        + +R++ R++DL
Sbjct: 117 IGDIIGVKGALHKSG--KGDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 173

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +   + R++++ ++R  M ++ ++E  TP++        AR F+          
Sbjct: 174 IVNEDSRKAFIIRSKLVAAIRNFMSSKGYLEVETPMMHVIPGGASARPFITHHNALDIDM 233

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++   ++ +  D+++
Sbjct: 234 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYQAYADYKDLMD 291

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
             E +L  V        ++            + R+   DAI+ Y  D  +++
Sbjct: 292 LTEEMLSTVAMNVLGSTSMPYGDEMVEFGGQYARMSMLDAIKHYNPDHAEIQ 343



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + ND       +++    G E+A+G    + +E     F
Sbjct: 386 EPKLIQPTFITGYPADISPLARRNDDFPFITDRFEFFIGGREVANGFSELNDAEDQDARF 445

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K+  ++           A + G+PP  G   GIDR+ ML   +  +R+V LFP 
Sbjct: 446 KAQVEAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLAMLFTNSHTIRDVILFPA 505

Query: 565 SQ 566
            +
Sbjct: 506 MR 507


>gi|312149258|gb|ADQ29329.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 462

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 133/379 (35%), Gaps = 51/379 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +  + A      +    +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKIHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------ 186
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKLN 185

Query: 187 -------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR-------------------- 276
           ++ EM+F + +D +   E++L+ +     N  +   +FL                     
Sbjct: 246 IEPEMAFYKLNDNITLAEDLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFE 305

Query: 277 -ICYDDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
            I Y  AI      K +    P    ++ T+H  +     F K + V    + +      
Sbjct: 306 VITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETFKKPVVVIDYPKNFKAFYMK 365

Query: 334 GGGNRAFCDRMNEWARSQG 352
              +      M+      G
Sbjct: 366 ANKDNKTVKGMDILVPKIG 384



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 379 LVPKIGEIIGGSEREDDLQKLENRIKELNLNI----EHLNWYLDLRRFGSAPHSGFGLGL 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V    G  N+R+   FP +  
Sbjct: 435 ERLVQYSTGISNIRDSIPFPRTPK 458


>gi|160933834|ref|ZP_02081222.1| hypothetical protein CLOLEP_02696 [Clostridium leptum DSM 753]
 gi|156867711|gb|EDO61083.1| hypothetical protein CLOLEP_02696 [Clostridium leptum DSM 753]
          Length = 470

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 58/346 (16%), Positives = 111/346 (32%), Gaps = 46/346 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V + GWV  +R    + F+++ D      V    +    +  K +    V    G  
Sbjct: 24  GKKVTVCGWVRTIRDSKALGFMELNDGSCFKGVQVVFEDKKIDNFKEIAKLNV----GAA 79

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           ++ + E +         EL A +I +   +         ++ +          L  R +T
Sbjct: 80  VTVNGEFVETPQAKQSFELHACEILVEGPSSPEYPLQ--KKRHSLEYLRTIAHLRPRANT 137

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS------- 190
                  R+     +        FI   TPILT S  EGA +    + ++          
Sbjct: 138 FSAAFRVRSAAAFGIHKFFQERGFIYAHTPILTGSDCEGAGEMFTATTLDLEDPPRGEDG 197

Query: 191 -------FYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+    +     Q +   MA  F + +   P FR E   + R   EF+ ++ E
Sbjct: 198 RIDFSQDFFEKHTSLTVSGQLEAECMAMAFGKVYTFGPTFRAEKSYTQRHAAEFWMIEPE 257

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RICY 279
           ++F + +D ++   ++++ V     +       F                       + Y
Sbjct: 258 IAFADLNDDMDLARDMMKYVIRYVMDTCPQDLQFFNQFVDKGLIDRLTHIVESDFAHVTY 317

Query: 280 DDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
            +A+             +       TEH  +   +VF K + V   
Sbjct: 318 TEAVEILKKHNSQFEYQVDWGVDLQTEHEKYLTEQVFQKPVFVTDY 363



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 26/134 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P     +E K        F M           D  ++ A   D++  G  EI
Sbjct: 356 KPVFVTDYP-----KEIKS-------FYMRMND-------DGRTVAAM--DMLVPGIGEI 394

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    + +      +G+     E  +       + G   H G   G +R++M L 
Sbjct: 395 IGGSQREERLDRLTARMKELGLK----EADYWWYLDLRRFGTNKHAGFGLGFERLIMYLT 450

Query: 552 GAKNVREVSLFPMS 565
           G +N+R+V  FP +
Sbjct: 451 GIQNIRDVLPFPRT 464


>gi|194467334|ref|ZP_03073321.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454370|gb|EDX43267.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 432

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 71/355 (20%), Positives = 131/355 (36%), Gaps = 26/355 (7%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           T +  +     VG  V++  W+   R  G I FL +RD  G  Q +   +    E   S 
Sbjct: 3   TITISE-APKHVGETVKIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNDVSEEKFDSA 61

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           + +        V    AE   +       E+  +  +I+  +E+ P    G +E+     
Sbjct: 62  KHDLHQETSFWVTGEIAEDKRSKF---GYEIHIKDFDIVGESEDYP---IGNKEHGIDFL 115

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R+R+  +         F +   P LT S+PEG  +      
Sbjct: 116 LDNRHLWLRSRKPWALMRIRSRVKLATMEFFEKHGFTQFDAPELTGSAPEGTTELFETDY 175

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ +F  L Q+ Q Y     A    R + + P FR E  ++ R   EF+ ++ EM+++ 
Sbjct: 176 FDRSAF--LSQSGQLY-AEAGAMALGRVYTMGPTFRAEKSKTRRHLMEFWMIEPEMAWMH 232

Query: 246 QDDILNTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTD 289
           QD+ L   E  +  + ++  +                       + RI Y +AI      
Sbjct: 233 QDESLKIQEQYIAYLVQDLIDHCARELEMVGRSVESLKPFTELPYPRITYKEAIEMLQKG 292

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
             D+       +  E ++  +F+    IL+     + + +P       +  C  +
Sbjct: 293 GFDVEYGADFGSPEETYLADQFQKPVFILNYPKEIKAFYMPEDPEDSRQVICADL 347



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 22/139 (15%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +I+++P     +E K      +P          +   DLL+ + +         EI 
Sbjct: 316 KPVFILNYP-----KEIKAFYMPEDP-----EDSRQVICADLLAPEGYG--------EII 357

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R++  E +       G+SK      +G      + G  PH G   G++R +  +  
Sbjct: 358 GGSERSYDYEYITNKLEENGLSK----EDYGWYDDLRKYGSIPHSGFGMGLERFLAWITL 413

Query: 553 AKNVREVSLFPMSQNFCDL 571
             ++RE   FP   N  + 
Sbjct: 414 QDHIRENIPFPRMLNRLNP 432


>gi|305666391|ref|YP_003862678.1| lysyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88708383|gb|EAR00620.1| lysyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 564

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 63/280 (22%), Positives = 115/280 (41%), Gaps = 15/280 (5%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCI 73
           + G  V +SG +   R  G   F +++D  G  QV  N D  C   +  K       L  
Sbjct: 44  EEGKKVIISGRLMSRRIQGKASFAELQDSEGRIQVYFNRDEICVGEDKTKYNEVYKKLLD 103

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRF 126
            G ++    E     +  G+  +  +   +LS A         + E           +R+
Sbjct: 104 IGDIIGIEGELFTTQV--GEKTVMVKDFSMLSKALRPLPLPKKDGEGNVYDEFNDPELRY 161

Query: 127 KYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +  + +  +KRT+I NS+R  +  + ++E  TPIL        AR FL   
Sbjct: 162 RQRYIDLVVNPSVRETFIKRTKITNSIREFLNNKGYLEVETPILQPIPGGAAARPFLTHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  A + Y + L+  GFD  ++ A  FR+E       P EF  +++ +++ 
Sbjct: 222 NALNIPLY-LRIANELYLKRLIVGGFDGVYEFAKDFRNEGMDRTHNP-EFTMIELYVAYK 279

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           + + ++   E +L  V ++ +    V+     I +     
Sbjct: 280 DYNWMMGMTEQLLEKVAKDATGSTKVTVGDKEIDFKAPYP 319



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 54/139 (38%), Gaps = 26/139 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +I D+P     +E   +  AH                        +++L+ NG E+A
Sbjct: 378 QPTFITDYP-----KEMSPLTKAHR----------------SKPGLTERFELMVNGSELA 416

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF-----GGLYRAFQCGMPPHGGIAAGIDRIV 547
           +     +      + F +     +  ++           RA + GMPP  GI  GIDR+V
Sbjct: 417 NAYSELNDPIDQRERFEHQLALAQKGDDEATQFIDYDFLRALEYGMPPTSGIGIGIDRLV 476

Query: 548 MLLLGAKNVREVSLFPMSQ 566
           M +    +++EV  FP  +
Sbjct: 477 MFMTNNSSIQEVLFFPQMR 495


>gi|294102359|ref|YP_003554217.1| lysyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293617339|gb|ADE57493.1| lysyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 506

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 144/377 (38%), Gaps = 34/377 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           ++  +D  + + ++G V  +R HG  +F +++D     Q+    ++   E     +    
Sbjct: 61  EIDEADEDAILSVAGRVMTLRKHGKAMFANLQDETDTMQLYFQLNAMGEEAYDFAKKW-- 118

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
              +G  +      I      G++ +  ++  +LS     PLP          +R++ R+
Sbjct: 119 -VDNGDFVGVVG--IPFRTRRGELTILVKESTLLSKVLR-PLPEKWHGLKDTEVRYRQRY 174

Query: 131 LDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQ 188
           LDL  +T +     KR+ II SMR  +I    +E  TPIL+  +    AR F        
Sbjct: 175 LDLMVNTDVRDTFRKRSDIIASMRKTLIDHGTLEVETPILSFLAGGANARPFQTYHNALD 234

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            + Y L  A + Y + L+   F R F+I   FR+E   +   P EF  +++  ++ +  D
Sbjct: 235 ANMY-LRIATELYLKRLVVGMFGRVFEIGKNFRNEGIDTMHNP-EFTLMEVYWAYADYSD 292

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEH 305
           +++  E ++R                        +  Y   + D   P   + M N+ + 
Sbjct: 293 MMDLTEELVRNAALAVDGL---------------VVNYQGIELDFSKPFRRVSMLNLVKE 337

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
           +   +F+                +  KG     A    +NE   +  +  L    + +  
Sbjct: 338 YTGIDFKTIKTDEEARKIANEKGVELKGSESRFA---VLNEVFEAYVEDKLVQPTFVI-- 392

Query: 366 SGNVAGMGPVAKHLNIV 382
            G+   + P+AK     
Sbjct: 393 -GHPTEISPLAKRDPED 408



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 11/131 (8%)

Query: 443 YEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           +E   E+K +       +P  +        +  D       +++L   G E+A+     +
Sbjct: 377 FEAYVEDKLVQPTFVIGHPTEISPLAKRDPEDPD----YTHRFELFICGSEVANAYSELN 432

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F +    KE  +            A +CG+PP GG+  GIDR+VM L  +++
Sbjct: 433 DPLDQRERFLDQLRKKEAGDEEAHVFDEDFINAIECGLPPTGGLGIGIDRLVMFLTDSRS 492

Query: 556 VREVSLFPMSQ 566
           +R+V LFP  +
Sbjct: 493 IRDVILFPAMR 503


>gi|307565245|ref|ZP_07627739.1| asparagine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307346058|gb|EFN91401.1| asparagine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 463

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 60/336 (17%), Positives = 120/336 (35%), Gaps = 33/336 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE 60
             RT     L  ++ G  + + GWV   R    + F+ + D   I   QVV NP S   E
Sbjct: 1   MKRTKIVDALSCTNFGKDIVVKGWVRSHRSSKAVDFIALNDGSTIKNIQVVVNPSSIDEE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             KS+ +   + + G ++    +   +       E+  + IE+         P+  + + 
Sbjct: 61  TLKSITTGACIGVTGTLVESMGKGQTS-------EVQCKNIEVYGTC-PSDYPMQKKGQS 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KY  + LR +T       R  +  ++        F    TP++T S  EGA + 
Sbjct: 113 FEYMR-KYGHMRLRTNTFGAVFRIRHNMAIAIHRYFHEHGFYYFHTPLITGSDAEGAGNM 171

Query: 181 LVPSRVNQG------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDP 225
              + ++               F+          Q +  L A+     +   P FR E+ 
Sbjct: 172 FQVTTLDLDRIAKSGKVEYEQDFFGKRTHLTVSGQLEGELGATALGAIYTFGPTFRAENS 231

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            + R   EF+ ++ E++F++  ++++  E+ ++              +FL    D  +  
Sbjct: 232 NTPRHLAEFWMVEPEVAFIDLPELMDLEEDFIKYCVRWALEHCKDDLDFLNKMIDHTL-- 289

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
                 D    ++  +         F +  +     
Sbjct: 290 -----IDRLEGVLKEDFVRLSYTEGFNILKEAQEKG 320



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 14/117 (11%)

Query: 452 IDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                  F M +    ++++G D+         L     EI  G IR    + +LQ    
Sbjct: 356 YPAEIKSFYMKKNEDGKTMQGTDV---------LFPRIGEIIGGSIREESYDKLLQEIEQ 406

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G+       ++       + G  PHGG   G +R+++ + G +N+R+V  F  +  
Sbjct: 407 RGMKA----EQYSWYLDTRKYGTCPHGGFGLGFERLILFVTGMQNIRDVIPFARTPK 459


>gi|15644453|ref|NP_229505.1| lysyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|11387158|sp|Q9X231|SYK_THEMA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|4982282|gb|AAD36772.1|AE001810_11 lysyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 502

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 69/323 (21%), Positives = 128/323 (39%), Gaps = 23/323 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y     G++  S     +  +G V  +R HG   F  ++D  G  Q     DS   E 
Sbjct: 39  EKYDYLQAGEVLES---EKLSFAGRVMSIRHHGKTAFFHMKDDTGRIQAYIKADSVGKEK 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
               +    +                   TG++ +  Q+  +LS A   PLP        
Sbjct: 96  MDLFKRHVKIGD-----FVGVRGFPFKSKTGELTIYVQEYTLLSKALR-PLPEKWHGIKD 149

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
           + I ++ R+L+L  +       K R + +  +R  + +  FIE  TPIL   +    AR 
Sbjct: 150 KEIIYRQRYLELIVNDEAIERFKKRFKAVRVIREFLNSRGFIEVETPILHYVTGGAEARP 209

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+    V     Y L  AP+ Y + L+  GF++ ++I   FR+E       P EF  +++
Sbjct: 210 FVTHLNVFDIDMY-LRIAPELYLKRLIVGGFEKIYEIGKNFRNEGISYKHSP-EFTSIEI 267

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR----------YGTD 289
             ++ + +D+++  E ++  V +       +S     I +    +R           G D
Sbjct: 268 YQAYADYNDMMDLTEELIVEVVKRTCGTLKISYQGKEIDFTPPWKRVRMRDFLKEKLGVD 327

Query: 290 KPDLRNPIIMHNVTEHFVHSEFR 312
             +  + +++  + EH V  E +
Sbjct: 328 ILEDPDEVLLKKLEEHGVELEIK 350



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 55/152 (36%), Gaps = 26/152 (17%)

Query: 417 RNHIAQEL-GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           R H+  +L  ++        +I+D P               +P          L      
Sbjct: 352 RAHLIDKLRDLVEEELVNPTFIIDHP------------VVISPLAKRHREDPRL------ 393

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQC 531
                +++L+  G EIA+     +      Q F      +E  +           RA + 
Sbjct: 394 ---TERFELIIFGREIANAFSELNDPVDQYQRFLEQAKMREEGDEEAHMMDLDFVRALEY 450

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP GG+  G+DR+ M +  +  +R+V  FP
Sbjct: 451 GMPPTGGLGIGLDRLFMFITDSPTIRDVIPFP 482


>gi|300727005|ref|ZP_07060425.1| lysine--tRNA ligase [Prevotella bryantii B14]
 gi|299775728|gb|EFI72318.1| lysine--tRNA ligase [Prevotella bryantii B14]
          Length = 576

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 65/319 (20%), Positives = 127/319 (39%), Gaps = 25/319 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             D    V ++G +   R  G   F++++D  G  QV    D  C    K + ++    +
Sbjct: 47  KEDEKREVIIAGRMMSRRVMGKASFVELQDSEGRIQVYVTRDDICPGEDKDLYNKVFKKL 106

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFK 127
             +      +       TG+I + AQ+I +LS + +    V  +      +     +R +
Sbjct: 107 LDIGDFIGIKGFVFKTQTGEISVHAQEITLLSKSLKPLPIVKYKDGVAYDKFDDPEMRAR 166

Query: 128 YRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSR 185
            R++DL  +  +    +KR  ++ +MR    A+ + E  TPIL + +    AR F+    
Sbjct: 167 QRYVDLVVNDGVKDTFLKRAVVLRTMRAFFDAQGYTEVETPILQSIAGGASARPFITHFN 226

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y +  A + Y + L+  GFD  ++I   FR+E    +  P EF  +++ + + +
Sbjct: 227 ALNIDMY-MRIATELYLKRLIVGGFDGVYEIGKNFRNEGMDKNHNP-EFTCMELYVPYKD 284

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSN----------NFLRICYDDAIRRY-GTDKPDLR 294
            + +++  E +L  +    +    V             F R+   +AI+   G D     
Sbjct: 285 YNWMMSFTEKLLETICVAVNGKPEVEYPDGKVISYKAPFRRLPILEAIQEKTGFDC---- 340

Query: 295 NPIIMHNVTEHFVHSEFRV 313
           N      + E  +     V
Sbjct: 341 NGKTEEEIREFCLSKGMEV 359



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 57/146 (39%), Gaps = 9/146 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E A+     +      + F
Sbjct: 378 EGTFIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMINGKECANAYSELNDPIDQEERF 437

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  +  ++          RA Q GMPP  GI  GIDR+ ML+ G + ++EV LFP 
Sbjct: 438 IEQMKLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLTMLMTGKEYIQEVMLFPQ 497

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLR 590
            +         P + S+++  ELG+ 
Sbjct: 498 MK----PEAKIPQS-SIKEWAELGVS 518


>gi|172057782|ref|YP_001814242.1| asparaginyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171990303|gb|ACB61225.1| asparaginyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 432

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 77/343 (22%), Positives = 128/343 (37%), Gaps = 35/343 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWV 70
              VG  + +  W+   R  G I+FL +RD  G  Q V   ++   E+   AK +  E  
Sbjct: 9   EKHVGEEITIGCWLANKRSSGKIVFLQLRDGSGFMQGVVVKETVGEELFKTAKGLTQETS 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G + S    T   +      E+    IE++  A + P+                R 
Sbjct: 69  MWVTGTIKSDGGRTAIGH------EMEITTIEVIHEAVDYPITPKAHG---TDFLMDNRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +V R  +I +       E FI+   PILT S+PEG  +       ++ +
Sbjct: 120 LWLRSKRQHAVMVVRNELIRATYEFFNQEGFIKVDPPILTGSAPEGTTELFHTKYFDEDA 179

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F + D  L
Sbjct: 180 Y--LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMMEPEMAFYDHDMNL 236

Query: 251 NTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRY---GTDKPD 292
              EN +  + +               + +    +   F R+ Y +AI      G D  +
Sbjct: 237 EVQENYVSHLVQSALKNCRPELELLERDLTVLENIQAPFPRVKYTEAIDMLKEQGFDDIE 296

Query: 293 LRNPIIMHNVTEHFVHSEFRVF--SKILSVNPGYEVWAIPAKG 333
             +     + T         VF      ++ P Y        G
Sbjct: 297 FGDDFGAPHETAIANTFARPVFITHWPKAIKPFYMKEDPENPG 339



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 48/154 (31%), Gaps = 30/154 (19%)

Query: 418 NHIAQELGIINC----NCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                + G  +     N F    +I  +P             A  PF M +         
Sbjct: 295 IEFGDDFGAPHETAIANTFARPVFITHWP------------KAIKPFYMKED------PE 336

Query: 473 DLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           +   +     DL+      EI  G  R    E +L       + +      +       +
Sbjct: 337 NPGFVLCD--DLIAPEGYGEIVGGSQREEDFEKLLAGMKEHDLDETGA---YKWYLETRK 391

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            G  PH G   G++R V  + G ++VRE   FP 
Sbjct: 392 YGSVPHSGFGLGLERTVAWITGVEHVRETIPFPR 425


>gi|302037376|ref|YP_003797698.1| lysyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300605440|emb|CBK41773.1| Lysyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 493

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 59/277 (21%), Positives = 111/277 (40%), Gaps = 15/277 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVM 78
            ++G +  +R  G   F  ++D     QV    D       +I++ +     + + G++ 
Sbjct: 59  TIAGRIVGLRRFGKAAFAVLQDGSDRLQVYLKKDTLGEQAHQISEGLDLGDWIGVTGVL- 117

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDT 137
                       T +  +  + +  LS A   PLP           R++ R++DL     
Sbjct: 118 --------FRTKTNEFTVEVKVLTFLSKALR-PLPEKWHGLTDVETRYRQRYVDLIANPQ 168

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           +H+    R+RI++ +R  +I   F+E  TP++       A    V      G+   L  A
Sbjct: 169 VHQIFALRSRIVSGIRAFLIERGFLEVETPMMHPIPGGAAAKPFVTHHNALGAELYLRIA 228

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF R F+I   FR+E   +   P EF  L+  +S+ +  D++   E + 
Sbjct: 229 PELYLKRLIVGGFPRVFEINRNFRNEGISTIHNP-EFTMLEFYVSYADYHDLIVLTEELF 287

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
             + ++     T+      I      RR+   +  L 
Sbjct: 288 GRLAQDILGTTTIDYQGTHINLGSPWRRWSYHQSILE 324



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 43/119 (36%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E ++         P       +  D       +++L   G EIA+     +      + F
Sbjct: 369 EPRLQQPTFITDYPIEISPLARRKDSDPSLTDRFELYIAGREIANAFSELNDPLDQRERF 428

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                     +           RA + GMPP  G   GIDR+VML     ++R+V LFP
Sbjct: 429 EAQAAKHAAGDEEAHRVDEDFLRALEYGMPPTAGEGIGIDRLVMLFTNQSSIRDVVLFP 487


>gi|229155785|ref|ZP_04283891.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228627771|gb|EEK84492.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 428

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 1   MKRSLTKEC----TKQGGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 55

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G ++  +   +        +EL A ++++++ AE+LP  +  ++  
Sbjct: 56  ---KVDVESVVHVIGEIVETTKTEL-------GVELLAHEVKVINGAEQLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++  ++S    +   +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVLSLRHERIAAIFKVKSTFVHSFSEFLAENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 224 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 262



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     ++  
Sbjct: 293 GDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTMPNKENPAITD 341

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F+  G+      ++F      F+ 
Sbjct: 342 S---------FDLLYKGLEITSGAQRIHNYEMLLASFNEKGLHP----DKFQSYLNTFRY 388

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 389 GCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 422


>gi|134299144|ref|YP_001112640.1| asparaginyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|172044276|sp|A4J412|SYN_DESRM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|134051844|gb|ABO49815.1| asparaginyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 429

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 65/299 (21%), Positives = 117/299 (39%), Gaps = 30/299 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLC 72
             V   V + GW++  R  G I FL +RD  G+ Q V     A   FE+AK +  E  + 
Sbjct: 11  KHVDEEVSIQGWLYNKRSSGKIQFLIVRDGTGLVQGVLVKKEAPEIFELAKELTQESAIR 70

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G+V              G  EL+   +EI+++A+E P      +E+        R L 
Sbjct: 71  LRGIVREEPRSM-------GGYELTVTGLEIINLAQEYP---ISHKEHGVDFLMDRRHLW 120

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R    +  +  R  I  + R      +F    +PI+T ++ EG           + ++ 
Sbjct: 121 MRTPRQNAILRIRAEIEQAARDFFNQNDFTLVDSPIITPAACEGTTTLFELDYHGEKAY- 179

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +   A    R +   P FR E  ++ R   EF+ ++ E +F + +D +  
Sbjct: 180 -LSQSGQLYNE-ASAMAVGRMYCFGPTFRAEKSKTRRHLMEFWMIEAEAAFFDFEDNMKL 237

Query: 253 MENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
            E ++  + +               + S    +   F R+ Y +A+    +        
Sbjct: 238 QEEMVYFIVQRVLERRRQDLELLGRDISKLEAIKLPFPRLSYTEAVELLKSKGEAFEWG 296



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 47/158 (29%), Gaps = 19/158 (12%)

Query: 417 RNHIAQELGIINCNCFEFCWIMDF--PF-------YEWNEEEKKIDFAHNPFTMPQGGME 467
           R    + + ++      F W  DF  P        +E      +       F M     +
Sbjct: 276 RLSYTEAVELLKSKGEAFEWGEDFGAPHETIISENFESPVFIHRYPTEIKAFYMKPDPED 335

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                    I    Y       E+  GG R    +++ Q      + K      F     
Sbjct: 336 GRVVLGADLIAPEGY------GEMIGGGQRIDDLQLLEQRLEEHKLPK----EAFEWYLD 385

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             + G  PH G   G++R V  +    +VRE   +P  
Sbjct: 386 LRRYGSVPHSGFGLGLERTVAWICKLDHVRETIPYPRM 423


>gi|34556537|ref|NP_906352.1| lysyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|39932014|sp|Q7MAR1|SYK_WOLSU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|34482251|emb|CAE09252.1| LYSYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 507

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 65/277 (23%), Positives = 118/277 (42%), Gaps = 20/277 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +  +R  G   F  I D  GI Q+  + +    E+ +  +    L   G +++ S
Sbjct: 62  SIAGRIKFLRHMGKAAFAKIEDESGILQIYFSQN----ELGEDFKMLKKLAEVGDIVAVS 117

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                    TG++ L A +++IL+ A  +PLP          +R++ R+LDL  +   K 
Sbjct: 118 G--FPFVTKTGELSLHALEMKILTKA-IVPLPEKYHGLVDVELRYRQRYLDLIMNPEVKE 174

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             K R+++++S+R       F+E  TP++        A+ F+          Y L  AP+
Sbjct: 175 TFKLRSQVVSSVRRFFEERGFLEVETPMMHPIPGGANAKPFITHHNALGVDRY-LRIAPE 233

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E       P EF  ++   ++    ++++  E +   
Sbjct: 234 LYLKRLVVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYKTYHELMSLTEELFGY 292

Query: 260 VFEEFS---------NGNTVSNNFLRICYDDAIRRYG 287
           +FE                 S  F RI Y  A+   G
Sbjct: 293 LFERLGLPKILPHGEEMIDFSLPFRRIPYKKALHEIG 329



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 67/185 (36%), Gaps = 36/185 (19%)

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGI-----------INCNCFEFCWIMDFPF 442
           + G     +  +  K  ++  +    +  E+GI           +        +I +FP 
Sbjct: 327 EIGGVPLEVIEEKEKLRAYLIEKGVRLEGEMGIGKLQAEAFDAFVEEKLINPTFITEFPI 386

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
            E +   ++                    +D     A +++L     EI++G    +   
Sbjct: 387 -EISPLARR--------------------SDENPQIADRFELFIGKKEISNGFSELNDPL 425

Query: 503 VMLQAFSNVGISKEVVENRFGGLYR----AFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
             L+ F     +K   +     +      A   G+PP  G   GIDR+VMLL   +++++
Sbjct: 426 DQLERFKAQVAAKNAGDEEAQHMDEDYVWALGHGLPPTAGEGIGIDRLVMLLTNNRSIKD 485

Query: 559 VSLFP 563
           V LFP
Sbjct: 486 VILFP 490


>gi|163783340|ref|ZP_02178333.1| lysyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881448|gb|EDP74959.1| lysyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 570

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 74/352 (21%), Positives = 129/352 (36%), Gaps = 24/352 (6%)

Query: 6   THSCGDLGV---SDVG-SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           T S  +L     SD     V L G +  +R  G  IF  I+D  G  Q+    D    E 
Sbjct: 115 TESIKELKERFDSDPNREKVSLGGRLVALRTMGKAIFGHIQDLTGRIQIYLRKDIVGDEN 174

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
                    L   G ++    E       TG++ +     E+L+     PLP        
Sbjct: 175 FSLFNEFIDL---GDIVGVEGELF--RTQTGELTVEVHSFELLAKCL-HPLPEKWHGLKD 228

Query: 122 ESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
             +R++ R+LDL       K  + R+R+I+ +R       F+E  TPIL T +S   A+ 
Sbjct: 229 VEVRYRQRYLDLIANPDARKTFLLRSRLISELRRFFDDRGFVEVETPILQTVASGANAKP 288

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+      + + Y L  AP+ Y + L+  GF R +++   FR+E       P EF  ++ 
Sbjct: 289 FMTYHNYLEMNLY-LRIAPELYLKRLIVGGFPRVYELGKNFRNEGVDRTHNP-EFTMVEF 346

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D++   E +   + E       +S   + + +           P  R     
Sbjct: 347 YAAYWDYNDLMKFTEKLFVHLLERTVGTLKLSYEGVELDFS----------PPFRRVSYF 396

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
             + E     +      I  +        I       +    D++ E    +
Sbjct: 397 DLLKEKTGKDKEFFLKDIEGLRKLAGELDITHHERLTHAKLIDKVFERVAEE 448



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 63/167 (37%), Gaps = 9/167 (5%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP-FTMPQ 463
           D   F       R  +A EL I +        ++D   +E   EE  +       F    
Sbjct: 406 DKEFFLKDIEGLR-KLAGELDITHHERLTHAKLIDK-VFERVAEEDLVQPTFVIDFPKLL 463

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF- 522
             +      D   +   +++L+   +E+A+     +      + F      KE+ +    
Sbjct: 464 SPLAKTHREDPDLV--ERFELIVATYEVANAYTELNDPADQKERFLEQLKEKEMGDEEAM 521

Query: 523 ---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                  RA + GMPP  G   GIDR+VMLL     +R+V LFP  +
Sbjct: 522 DMDEDFIRALEYGMPPTAGEGIGIDRLVMLLTNTDTIRDVILFPHMR 568


>gi|91794476|ref|YP_564127.1| lysyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123060626|sp|Q12JH2|SYK_SHEDO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|91716478|gb|ABE56404.1| lysyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 500

 Score =  187 bits (475), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 63/311 (20%), Positives = 131/311 (42%), Gaps = 35/311 (11%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R+H   +L              +G    ++G V   R      FL I+D  G  Q  A  
Sbjct: 37  RSHKAAELQAQYGENTKEELEALGYQTSIAGRVMAKRGP----FLVIQDVSGRIQAYAGK 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                     ++  +     G ++    +   +    G + ++ ++ ++L+ A   PLP 
Sbjct: 93  PVQG-----DLKERYQGLDIGDIIGVKGQLHLSG--KGDLYVNMEEYQLLTKALR-PLPE 144

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R++DL  +   +N  + R+++++++R  MI + F+E  TP++    
Sbjct: 145 KFHGLTDQETRYRQRYVDLIVNEESRNAFIMRSKVVSAIRNFMIKKEFMEVETPMMHVIP 204

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+        + Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 205 GGASARPFVTHHNALDMAMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNP 262

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  ++  M++ +  D+++  E +L  +  +      +            + R+   +AI
Sbjct: 263 EFTMMEFYMAYADYQDLMDLTEEMLSSIAIDLLGSAQMPYGEHTVDFGGPYARLSMLEAI 322

Query: 284 RRYGTDKPDLR 294
           ++Y  +   ++
Sbjct: 323 QKYNPENATIQ 333



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + ND       +++    G E+A+G    + ++     F
Sbjct: 376 EPKLMQPTFITGYPADISPLARRNDNNDFITDRFEFFIGGREVANGFSELNDAQDQDNRF 435

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K+  ++           A + G+PP  G   GIDR+VML      +R+V LFP 
Sbjct: 436 KAQVNAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFPA 495

Query: 565 SQ 566
            +
Sbjct: 496 MR 497


>gi|288803206|ref|ZP_06408640.1| asparagine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288334247|gb|EFC72688.1| asparagine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 463

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 58/295 (19%), Positives = 115/295 (38%), Gaps = 26/295 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE 60
             RT     L  +D G  + + GWV   R    + F+ + D   I   QVV +P +   E
Sbjct: 1   MKRTKIVDALACTDFGKDINVKGWVRSHRSSKAVDFIALNDGSTIKNIQVVVDPSTIDAE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             KS+ +   + + G ++        +       E+  ++IEI  +      P+  + + 
Sbjct: 61  ELKSITTGACISVVGTLVESQGAGQTS-------EIQCKEIEIYGLC-PSDYPMQKKGQS 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KY  + LR +T       R  +  ++        F    TP++T S  EGA + 
Sbjct: 113 FEYMR-KYGHMRLRTNTFGAVFRIRHNMAIAIHQYFHEHGFYYFHTPLITGSDAEGAGNM 171

Query: 181 LVPSRVNQG------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDP 225
              + ++               F+          Q +  L A+     +   P FR E+ 
Sbjct: 172 FQVTTLDLDRIAKGGEVDYSADFFGKRTNLTVSGQLEGELGATALGAIYTFGPTFRAENS 231

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
            + R   EF+ ++ E++F++++++++  E+ ++               FL +  D
Sbjct: 232 NTPRHLAEFWMVEPEVAFIDKNELMDLEEDFIKYCVRWALEHCKDDLEFLNMRID 286



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P      E K      NP        ++++G D+       
Sbjct: 338 HERYLVEEHFKRPVIMTDYP-----SEIKSFYMKKNP------DGKTMQGTDV------- 379

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L  +  EI  G +R    + +L    N G+ +      +       + G  PHGG   
Sbjct: 380 --LFPHIGEIIGGSVREENYDKLLAEIDNRGMKR----EVYDWYLDTRKYGTCPHGGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G +N+R+V  F  +  
Sbjct: 434 GFERLILFVTGMQNIRDVIPFARTPK 459


>gi|257452680|ref|ZP_05617979.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|257466541|ref|ZP_05630852.1| lysyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917696|ref|ZP_07913936.1| lysyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059220|ref|ZP_07923705.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684896|gb|EFS21731.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313691571|gb|EFS28406.1| lysyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 493

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 71/380 (18%), Positives = 136/380 (35%), Gaps = 29/380 (7%)

Query: 7   HSCGDLGVSDVGSFV--RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           H  GD+        +  + +G +   R  G I F  I D  G  Q+    D    E  + 
Sbjct: 40  HMVGDILKHTPEEELIFKTAGRIMSFRRKGKIAFAHIEDQTGKIQIYVKQDELGEEAFQL 99

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           V+   V  + G+      E       TG++ L A  + +L+      LP           
Sbjct: 100 VKMLNVGDMVGI------EGTLFITHTGELTLRANVVTLLTK-NIRALPEKFHGLTDVET 152

Query: 125 RFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLV 182
           R++ R++DL  +   K    KRT II  ++  +    F+E  TP++        AR F+ 
Sbjct: 153 RYRKRYVDLIMNREVKETFLKRTMIIKELKKYLDDRGFLEVETPMMHPIVGGAAARPFIT 212

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y +  AP+ Y + L+  GFD+ + +  CFR+E   +   P EF  +++  +
Sbjct: 213 HHNTLDVDLY-MRIAPELYLKKLIVGGFDKVYDLNKCFRNEGMSTRHNP-EFTTVELYQA 270

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           + + +D+++  E V+  + ++ +             YD           D +  + M ++
Sbjct: 271 YADFNDMMDLTEGVITTLCDKVNG-----------TYDITFDGVDLHLKDFKR-VHMVDL 318

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +     +F            +            N         + +   +  +   F  
Sbjct: 319 IKEVTGVDFWRKDITFEEAKAFAKEHHVEIADHMNSVGHVINEFFEQKCEEKVIQPTFI- 377

Query: 363 LDESGNVAGMGPVAKHLNIV 382
               G+   + P+AK     
Sbjct: 378 ---YGHPVEISPLAKKNEED 394



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 63/165 (38%), Gaps = 14/165 (8%)

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
            +  +FA +    IA  +  +     EF        +E   EEK I      +  P    
Sbjct: 335 EEAKAFAKEHHVEIADHMNSVGHVINEF--------FEQKCEEKVIQPT-FIYGHPVEIS 385

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF---- 522
              K N+       +++L  N  E A+     +        F       E   +      
Sbjct: 386 PLAKKNEEDPRFTDRFELFINAREYANAFSELNDPADQRSRFEAQVEEAERGNDEATPVI 445

Query: 523 -GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                 A + G+PP GG+  GIDR+VMLL GA ++R+V LFP  +
Sbjct: 446 DDDYVEALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVILFPQMK 490


>gi|302759575|ref|XP_002963210.1| hypothetical protein SELMODRAFT_79851 [Selaginella moellendorffii]
 gi|300168478|gb|EFJ35081.1| hypothetical protein SELMODRAFT_79851 [Selaginella moellendorffii]
          Length = 485

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 53/292 (18%), Positives = 112/292 (38%), Gaps = 23/292 (7%)

Query: 5   RTHSCGDLGVSDVG-----------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RTH    L                   V ++G +   R  G + FL IRD     Q+  +
Sbjct: 15  RTHKATQLQEKYADLPAGGVADSDEDRVSVAGRIFARRAFGKLAFLGIRDDSASIQLYCD 74

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
                    +S          G ++  +          G++ +    + IL+ +  LPLP
Sbjct: 75  K-----AKLESFTQLKSTVDIGDIVGATGTLKRTE--KGELSVYVDNLVILTKS-ILPLP 126

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS 172
                      R++ R+LD+  +     + + R ++++ +R  +    F+E  TPIL  +
Sbjct: 127 EKWHGLTDIEKRYRQRYLDMIMNPEVAGVFRARAKVVSVIRRFVEDLGFLEIETPILQGA 186

Query: 173 SPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F+      +   + L  A + + + ++  GF+R +++   FR+E   +   P
Sbjct: 187 AGGADARPFITHHNSLERDLF-LRIATELHLKRMLVGGFERVYELGRIFRNEGISTRHNP 245

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
            EF  +++  ++ + +D++   E ++    E       +      I  +   
Sbjct: 246 -EFTSIEIYQAYADYNDMMALAEELVTKCAEAIFGNAKLLYQGTDISLERPW 296



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 3/87 (3%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF---GGLYRAFQCGMPPH 536
            +++L   G E+A+           +    +     +              A + GMPP 
Sbjct: 393 ERFELYICGRELANAFSELTDPIEQVHRGESAVKQHKNDSYEVTLDEDFLTALEYGMPPT 452

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+  GIDR+VMLL  + ++R+V  FP
Sbjct: 453 AGMGIGIDRLVMLLTDSPSIRDVIAFP 479


>gi|229074900|ref|ZP_04207909.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228708237|gb|EEL60401.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 432

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 19/273 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T          VG  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 5   MKRSLT----QASTEHVGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ I G ++  S   +        +E+ A ++++L+ AE+LP  +  ++  
Sbjct: 60  ---KVDVESVVQIVGEIVETSKTEL-------GVEVLAHEVKVLNGAEQLPFELNKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        +  +  S    +   +FI   TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKATLAQSFSDYLTENDFIRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVS 271
           E+ F+ +  +++    +VLR +F++        
Sbjct: 228 ELGFIDDFHEVMQLETDVLRYMFQQVGETCEKE 260



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 63/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     S+  
Sbjct: 297 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTMPNNENPSITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  +++L +F   G+       +F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYDLLLASFKEKGLHL----EKFQSYLNTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|156555455|ref|XP_001606085.1| PREDICTED: similar to aspartyl-tRNA synthetase [Nasonia
           vitripennis]
          Length = 527

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 61/324 (18%), Positives = 116/324 (35%), Gaps = 23/324 (7%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAK 63
              DL     G  V + G +H  R  G   F+ +R       G+  V         +   
Sbjct: 72  HIKDLNTELAGQVVWIRGRLHTSRGKGKQCFIVVRQQSHSIQGLAAVNDKISKQMVKFIS 131

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER----- 118
            V  E ++ ++  V        +       +E+  ++  ++S +E        +      
Sbjct: 132 GVTKESIVDVEAKVQKVPNPIESCTQK--DVEIHIEQFFVVSASEPQLPLQIEDAARPVN 189

Query: 119 ---------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                    +  +  R   R LDLR             +    R  +  + F+E  TP +
Sbjct: 190 DNDTSNLNIKVNQDTRLDNRILDLRTPANQAIFRLEAGVCKLFRDILTNKGFVEIHTPKI 249

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
            +++ EG  +    S     ++ A  Q+PQ YKQ+ +A+ F++ F +   FR ED  + R
Sbjct: 250 ISAASEGGANVFTVSYFKSSAYLA--QSPQLYKQMAIAADFEKVFTVGAVFRAEDSNTHR 307

Query: 230 LPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
              EF  LD+EM+F     ++++T+  +   +F+            +   Y     ++  
Sbjct: 308 HLTEFVGLDLEMAFKYHYHEVMDTIGQMFTELFKGLQESYQTEIGIINQQYKVEPFKFLD 367

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFR 312
               L  P  +  + E  V     
Sbjct: 368 PPLKLEFPQAVKLLREAGVEMGDE 391



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF             +  +  +  YD+   G EI SG  R H  + + +   +
Sbjct: 419 KYPLAVRPFYTMPD------TANPKA--SNSYDMFMRGEEIISGAQRIHDPDFLTERAKH 470

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI       +      AF+ G PPH G   G++R+VML LG  N+R+VS+FP       
Sbjct: 471 HGIDI----EKIKAYIDAFRYGCPPHAGGGIGMERVVMLYLGLDNIRKVSMFPRDPKRVT 526

Query: 571 L 571
            
Sbjct: 527 P 527


>gi|313675358|ref|YP_004053354.1| lysyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312942056|gb|ADR21246.1| lysyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 576

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 65/341 (19%), Positives = 132/341 (38%), Gaps = 31/341 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS--EWVLCIDGL 76
             + ++G +   R  G   F +I+D  G  QV  N D  C +  K++ +     L   G 
Sbjct: 52  KNISIAGRLMSKRIMGKASFAEIQDSTGRIQVYVNRDEICPDEDKTLYNTVFKKLLDIGD 111

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-----------YPESIR 125
           ++          +  G+I +  +++ +LS +           +                R
Sbjct: 112 IIGIKGYVFTTQV--GEISIHVKELFVLSKSLRPLPITKETTDEQGNVKRHDAFTDSEQR 169

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
           ++ R++D+  +   +   + RT+++NSMR  +    ++E  TPIL        AR F   
Sbjct: 170 YRQRYVDMIVNPEVRETFRKRTQLVNSMRTFLGDRGYLEVETPILQPLYGGAAARPFKTH 229

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                 + Y L  A + Y + L+  G+D  F+ A  FR+ +  S     EF Q+++ +++
Sbjct: 230 HNTLDMTLY-LRIANELYLKRLIVGGYDGVFEFAKDFRN-EGMSRFHNPEFTQVELYVAY 287

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            + + ++N +E ++  V  +      V      I +    +RY            M+   
Sbjct: 288 KDYEWMMNLVEEMVEKVAMDIHGTTEVKVGENIINFQRPWKRY-----------TMYEAI 336

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           EHF   +    ++   +    +   +P     G     D +
Sbjct: 337 EHFTGIDISEMNEE-ELRKTAQKLHVPVDDSMGKGKLIDEI 376


>gi|257463162|ref|ZP_05627562.1| lysyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060754|ref|ZP_07925239.1| lysyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313686430|gb|EFS23265.1| lysyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 493

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 62/310 (20%), Positives = 122/310 (39%), Gaps = 25/310 (8%)

Query: 7   HSCGDLGVSDVGSFV--RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           H  G++        +  + +G +   R  G I F  I D  G  Q+    D    E  + 
Sbjct: 40  HMVGEILKHTPEEELNFKTAGRIMSFRRKGKIAFAHIEDQTGKIQIYVKQDEVGEEAFRL 99

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           ++   V  + G+      E       TG++ L    + +L+      LP           
Sbjct: 100 IKMLNVGDVIGV------EGTLFITHTGELTLRGNIVTLLTK-NIRALPEKFHGLTDVET 152

Query: 125 RFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLV 182
           R++ R++DL  +   K    KRT II  ++  +    F+E  TP++        AR F+ 
Sbjct: 153 RYRKRYVDLIMNRDVKETFLKRTMIIKELKKYLDDRGFLEVETPMMHPIVGGAAARPFVT 212

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y +  AP+ Y + L+  GFD+ + +  CFR+E   +   P EF  +++  +
Sbjct: 213 HHNTLDIDLY-MRIAPELYLKKLIVGGFDKVYDLNKCFRNEGMSTRHNP-EFTTVELYQA 270

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           + + +D+++  E V+  + ++ +             YD +         D +  + M ++
Sbjct: 271 YADFNDMMDLTEGVITSLCQKVNG-----------TYDISFDGVDLHLKDFKR-VHMVDL 318

Query: 303 TEHFVHSEFR 312
            +     +F 
Sbjct: 319 IKEVTGVDFW 328



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 63/168 (37%), Gaps = 20/168 (11%)

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQ 463
            +  + A +    IA+ +  +     EF        +E   EEK I       +P  +  
Sbjct: 335 EEAKALAKEHHVEIAEHMNSVGHVVNEF--------FEQKCEEKVIQPTFVYGHPVEISP 386

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF- 522
             +      D       +++L  N  E A+     +        F       E   +   
Sbjct: 387 --LAKKNEEDPR--FTDRFELFINAREYANAFSELNDPADQRSRFEAQVEEAERGNDEAT 442

Query: 523 ----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                    A + G+PP GG+  GIDR+VMLL GA ++R+V LFP  +
Sbjct: 443 PVIDDDYVEALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVILFPQMK 490


>gi|300934636|ref|ZP_07149892.1| lysyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 535

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 97/559 (17%), Positives = 184/559 (32%), Gaps = 110/559 (19%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            +    V ++G V  VR  G + F  ++D  G T        +  E+ +   ++W   +D
Sbjct: 83  EETQEVVGVAGRVMFVRNTGKLAFATLQDGDGTT---LQVMLSLAEVGEEALNDWKALVD 139

Query: 75  -GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++      I++    G++ + AQ+  +   A+ L       +E  E  R ++R+ DL
Sbjct: 140 LGDMVFVEGRIISSR--RGELSVMAQRWFM--TAKSLRPLPVAHKEMSEDTRIRHRYTDL 195

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             R+   KN + R +++ ++R  +    F+E  TP+L        AR F+  S       
Sbjct: 196 IMREQARKNAMTRIKVMRALRNALERRGFLELETPMLQTLHGGAAARPFITHSNALDIDL 255

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ + +  +  G DR F++   FR+E   S   P EF  L+   ++ + +    
Sbjct: 256 Y-LRIAPELFLKRAVVGGLDRVFEVNRNFRNEGVDSSHSP-EFAMLETYQAYGDYNTAAT 313

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
               +++ V  E                                 + + + TE+ +  E+
Sbjct: 314 ATREIIQEVAIEVFGTT---------------------------KVTLVDGTEYDLGGEW 346

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
                  S+N   +    P +      +  + + E A+  G          +   G    
Sbjct: 347 PEIKMYPSLNEALQKK-HPGQPEVTIDSTVEELKELAKVVG--------LEVTAKGGWGH 397

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
              V         E +   L     D   F+   P++        R+             
Sbjct: 398 GKLV---------EELWEHLCEDQLDGPIFVRDFPVETSPLVRQHRSEPG---------- 438

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
                + +           K D     F +  G  E +       I+  +++        
Sbjct: 439 -----VTE-----------KWDLYVRGFELATGYSELIDP----VIQRERFEDQARLAAG 478

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                     + +      +                      PP  G   GIDR++M L 
Sbjct: 479 GDDEAMVLDEDFLAAMEQGM----------------------PPTAGTGMGIDRLLMALT 516

Query: 552 GAKNVREVSLFPMSQNFCD 570
           G   +RE  LFP+ +   D
Sbjct: 517 GLG-IRETILFPLVKPERD 534


>gi|254555960|ref|YP_003062377.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300767762|ref|ZP_07077672.1| asparagine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|254044887|gb|ACT61680.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300494747|gb|EFK29905.1| asparagine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 431

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 67/310 (21%), Positives = 115/310 (37%), Gaps = 32/310 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY-GITQVVANPD--SACFEIAKSVRSEWV 70
              V   V++  W+   R  G I FL +RD       V    +     F     +  E  
Sbjct: 10  ADHVNEQVKIGVWISNKRSSGKIAFLQLRDGTATFQGVALKNELGETAFAQLTDLAQETS 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G + + +             EL+  + E++  + + P+               +R 
Sbjct: 70  LWVTGTIHADTRSPF-------GYELAISQFEVVGTSHDYPITPKDHG---IDFLLDHRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    +  +  R  +I ++        FI+   PILT S+PEG  +        Q +
Sbjct: 120 LWLRSSRPNAIMRIRNEVIRAVYEFFNDRGFIKIDAPILTGSAPEGTTELFKTDYFGQDA 179

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y     A  F + F   P FR E  ++ R   EF+QL+ EM+++ QD+ L
Sbjct: 180 Y--LSQSGQLY-GEAGAMAFGKIFTFGPTFRAEKSKTRRHLTEFWQLEPEMAWIHQDESL 236

Query: 251 NTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRRYGTDKPDLR 294
              E ++  + +   +                       F R+ YDDAI     +  D+ 
Sbjct: 237 EVQEQLVAYLVQAVIDHCPHELAVLDRDVATLQKYTKLPFPRVSYDDAITLLQANGFDVD 296

Query: 295 NPIIMHNVTE 304
             +   +  E
Sbjct: 297 WGVDFGSPEE 306



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 48/143 (33%), Gaps = 7/143 (4%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDL 484
           ++  N F+  W +DF   E     +  D        P+      ++ +          DL
Sbjct: 287 LLQANGFDVDWGVDFGSPEETFLAEHFDQPVFVLNYPKAIKAFYMQAHPTRDDVVIAADL 346

Query: 485 VCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           +      EI  G  R+   + + +     G   +  E          + G  PH G   G
Sbjct: 347 LAPEGYGEIIGGSERSTDYDYLKERLLASGQDLQDYE----WYLDLRKYGSVPHSGFGMG 402

Query: 543 IDRIVMLLLGAKNVREVSLFPMS 565
           ++R +  +    +VRE   FP  
Sbjct: 403 LERFLAWITLQDHVRETIPFPRM 425


>gi|329898899|ref|ZP_08272497.1| Asparaginyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328920707|gb|EGG28179.1| Asparaginyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 468

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 122/385 (31%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VG+ VR+ GW+   R    GI FL I D      + A   +        V+        G
Sbjct: 20  VGTIVRVQGWLRSKRDSKAGISFLAIHDGSCFDTIQAVVPAELDNYESEVKKLS----TG 75

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +      + +      +E+ A ++ ++   ++       ++ +          L  R 
Sbjct: 76  CAVDVCGTLVQSEGKGQALEIQATQVIVVGDVDDPEGYPIAKKRHTFEYLRTQAHLRPRT 135

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +T       RT + N++        F   +TPI+T S  EGA +    S ++        
Sbjct: 136 NTFGAITRVRTTLANAIHQFFFDHGFHWINTPIITGSDCEGAGELFRVSTLDMVNTPKNA 195

Query: 189 -------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q +         + +   P FR E+  + R   EF+ ++
Sbjct: 196 QGQVDYKQDFFEQEAFLTVSGQLEVESYCLAMSKVYTFGPTFRAENSNTSRHLAEFWMIE 255

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F    D  +  E +L+ VF    N                      N +   F RI
Sbjct: 256 PEVAFANLADNADLAEALLKHVFTRVMNEREDDMAFFNQRIDTTVLERLTNVIEQPFERI 315

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI            P+   +   +EH  +      ++     P   +         
Sbjct: 316 DYTDAINILENCGQKFEFPVSWGIDMASEHERY-----LAEKHVGRPVVVMNYPKDIKAF 370

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 371 YMRLNDDEKTVAAMDVLAPGIGEII 395



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 65/226 (28%), Gaps = 39/226 (17%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVR---------LDMQDGDSCFFIAGDPLKFCSFAADARN 418
               + P     N+ +   +            ++ ++ D  FF             +   
Sbjct: 250 EFWMIEPEVAFANLADNADLAEALLKHVFTRVMNEREDDMAFFNQRIDTTVLERLTNVIE 309

Query: 419 HIAQELGIINC--------NCFEF--CWIMDFPFYEWNEEEKKIDFAHNP----FTMPQG 464
              + +   +           FEF   W +D        E ++     +       M   
Sbjct: 310 QPFERIDYTDAINILENCGQKFEFPVSWGID-----MASEHERYLAEKHVGRPVVVMNYP 364

Query: 465 GMES---LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
                  ++ ND     A   D++  G  EI  G  R    +V+             +  
Sbjct: 365 KDIKAFYMRLNDDEKTVA-AMDVLAPGIGEIIGGSQREERLDVLDSRMDE------TMRE 417

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                    + G  PH G   G +R++  + G +NVR+   FP + 
Sbjct: 418 HLWWYRDLRRYGTVPHAGFGLGFERLLNYITGMENVRDAIPFPRTP 463


>gi|315079610|gb|EFT51603.1| lysyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
          Length = 1081

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 102/563 (18%), Positives = 177/563 (31%), Gaps = 120/563 (21%)

Query: 7    HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            H  GD+ V   G  + +SG V   R HGG IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626  HRLGDVAVELTGQEMTVSGRVDACRDHGGGIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67   SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686  HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127  KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
            + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740  RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185  RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   Y L  AP+ Y + LM  G          F                        
Sbjct: 800  NAYDLDLY-LRIAPELYLKRLMVGGA------GRVF------------------------ 828

Query: 245  EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                           +   F N    + +       +A + YG         + M ++T 
Sbjct: 829  --------------EIGRNFRNEGADATHNPEFTMLEAYQAYGDY-------VQMRHLTR 867

Query: 305  HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                    + S   +   G  V     KG        D  NE           +    ++
Sbjct: 868  EM------ILSAARNATGGTVVRGRDRKGVEH---EIDLANE-----------WHVITVN 907

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            E         +++ L    T        +   +                 +   H+++ +
Sbjct: 908  EG--------ISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSEHV 959

Query: 425  GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                    E  +  DFP               +P T        L         A ++DL
Sbjct: 960  ------TVEPTFFCDFP------------TDVSPLTRQHRDDPRL---------AEKWDL 992

Query: 485  VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +  G E+ +         +  + F+   +                  A +  MPP GG+ 
Sbjct: 993  IIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMG 1052

Query: 541  AGIDRIVMLLLGAKNVREVSLFP 563
             G+DR+VM+L  A ++RE   FP
Sbjct: 1053 MGLDRLVMMLTNA-SIRETISFP 1074


>gi|303247151|ref|ZP_07333426.1| asparaginyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302491577|gb|EFL51462.1| asparaginyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 462

 Score =  187 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 73/358 (20%), Positives = 131/358 (36%), Gaps = 48/358 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--AC 58
           M   RT     L     G+  R+ GWV   R   G  FL+I D   +T + A  D     
Sbjct: 1   MSMRRTTVQAALQGVGSGAEARVMGWVRTRRDAKGFSFLEINDGSCLTNLQAIVDDGAQG 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
             + K + +   + + G ++    +         + EL A K+E+L  A+    P+  +R
Sbjct: 61  AALLKELGTGAAVAVTGELVPSPGKG-------QRFELRATKLELLGPADSETYPLQKKR 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R     L  R +     +  R+ +  ++     A  F    TPI+T S  EGA 
Sbjct: 114 HSDEFLR-TIAHLRPRTNKYGAMLRLRSALGQAVHAFFAARGFAWVQTPIITGSDCEGAG 172

Query: 179 DFLVPSRVNQG------------SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           +    + ++               F+A         Q     +A    + +   P FR E
Sbjct: 173 EMFRVTALSDAESCLPPGERASRDFFAKDAYLTVSGQLSAEPLALALGKVYTFGPTFRAE 232

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV--------FEEFSNGNTV----- 270
              + R   EF+ L+ EM+F + +D ++  E +L+ +         E+F+          
Sbjct: 233 HSDTSRHAAEFWMLEPEMAFADLEDDMDLGEALLKHLVGVAVHDCAEDFALFAKYVDPSL 292

Query: 271 --------SNNFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKIL 318
                      F+R+ Y +A+          + P+       +EH  +   R F + +
Sbjct: 293 PDTLGAILERPFVRLPYAEAVEILSKAGETFQFPVGFGCDLQSEHERYLTERHFKRPV 350



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 59/156 (37%), Gaps = 10/156 (6%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH--NPFTMPQGGME----SL 469
            R   A+ + I++     F + + F     +E E+ +   H   P  +     E     +
Sbjct: 305 VRLPYAEAVEILSKAGETFQFPVGFGCDLQSEHERYLTERHFKRPVVLYDYPKEIKAFYM 364

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
           + ND     A    LV    EI  G  R    +V+      + +        +       
Sbjct: 365 RQNDDGKTVAAMDVLVPGIGEIIGGSAREERLDVLTGRIRELSLPM----ENYWWYLDTR 420

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           + G  PH G   G +R+VML+ G  N+R+V+ F  +
Sbjct: 421 RFGTVPHAGFGLGFERLVMLVTGIGNIRDVTAFART 456


>gi|317505009|ref|ZP_07962957.1| asparagine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315663891|gb|EFV03610.1| asparagine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 463

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 61/290 (21%), Positives = 118/290 (40%), Gaps = 26/290 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE 60
             RT     L  ++ G  + + GWV   R    + F+ + D   I   Q+V +P S   +
Sbjct: 1   MKRTKIIDALQCTEYGKDINVKGWVRSHRNSKAVDFIALNDGSTINNIQIVVDPTSMDAD 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             KS+ +   + + G ++               +E+ +++IEI  +      P+  + + 
Sbjct: 61  TLKSITTGACISVVGTLVQSQGAGQT-------VEIQSKEIEIYGLC-PSDYPMQKKGQS 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KY  L LR +T       R  +  ++        F    TPI+TAS  EGA + 
Sbjct: 113 FEYMR-KYAHLRLRTNTFGAVFRIRHNMAIAVHKYFHDHGFYYFHTPIITASDAEGAGEM 171

Query: 181 LVPSRVN------------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
              + ++            +  F+          Q +  L A+     +   P FR E+ 
Sbjct: 172 FQVTTLDLSRTGKDDTVPYEKDFFGKKTNLTVSGQLEGELGATALGAIYTFGPTFRAENS 231

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + R   EF+ ++ E++F+EQD++++  E+ ++   +   +       FL
Sbjct: 232 NTPRHLAEFWMIEPEVAFLEQDELMDLEEDFIKYCVQWALDNCKDDLEFL 281



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 14/118 (11%)

Query: 451 KIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                   F M +     +++G D+         L     EI  G +R    + ++    
Sbjct: 355 DYPSEIKAFYMKKNADGRTMQGTDV---------LFPRIGEIIGGSVREESYDKLVAEIK 405

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             G+ K    + +       + G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 406 ARGMEK----DSYSWYLDTRKYGSCPHAGFGLGFERLILFVTGMQNIRDVIPFPRTPK 459


>gi|314914790|gb|EFS78621.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
          Length = 1081

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 101/563 (17%), Positives = 177/563 (31%), Gaps = 120/563 (21%)

Query: 7    HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            H   D+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626  HRLSDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67   SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686  HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127  KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
            + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740  RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185  RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   Y L  AP+ Y + LM  G          F                        
Sbjct: 800  NAYDLDLY-LRIAPELYLKRLMVGGA------GRVF------------------------ 828

Query: 245  EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                           +   F N    + +       +A + YG         + M ++T 
Sbjct: 829  --------------EIGRNFRNEGADATHNPEFTMLEAYQAYGDY-------VQMRHLTR 867

Query: 305  HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                    + S   +   G  V     KG        D  NE           +    ++
Sbjct: 868  EM------ILSAARNATGGTVVRGRDRKGVEH---EIDLANE-----------WHVITVN 907

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            E         +++ L    T        +   +                 +   H+++ +
Sbjct: 908  EG--------ISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSEHV 959

Query: 425  GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                    E  +  DFP               +P T        L         A ++DL
Sbjct: 960  ------TVEPTFFCDFP------------TDVSPLTRQHRDDPRL---------AEKWDL 992

Query: 485  VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +  G E+ +         +  + F+   +                  A +  MPP GG+ 
Sbjct: 993  IIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMG 1052

Query: 541  AGIDRIVMLLLGAKNVREVSLFP 563
             G+DR+VM+L  A ++RE   FP
Sbjct: 1053 MGLDRLVMMLTNA-SIRETISFP 1074


>gi|284007569|emb|CBA73110.1| asparaginyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 466

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 71/379 (18%), Positives = 127/379 (33%), Gaps = 49/379 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCI 73
           VG  V + GWV   R    G  FL I D      +    N +   +E      ++ +   
Sbjct: 16  VGEEVTVRGWVRTRRDSKAGFSFLAIYDGSCFNPLQAIVNKELDNYE------NDVLHLT 69

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +  +     +     Q ELSA ++ ++ + E         + +      +   L  
Sbjct: 70  TGCSVEVTGIVKPSEGQGQQFELSATQVVVVGIVENPDSYPMAAKRHSVEYLREVAHLRP 129

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN------ 187
           R + +      R  +  ++      E ++  STPI+TAS  EGA +    S ++      
Sbjct: 130 RTNLIGAIARVRNTLAQAIHRFFHEEGYLWVSTPIITASDTEGAGEMFRVSTLDLQNIPR 189

Query: 188 --------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 190 TEKGDINFDKDFFGREAFLTVSGQLNGEAYACALSKIYTFGPTFRAENSNTSRHLAEFWM 249

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL--------------------- 275
           ++ E++F + +DI +  E +L+ VF+           F                      
Sbjct: 250 VEPEVAFADLNDIASLAEKMLKYVFKSVLQERHDDLTFFAERIDKEVISRLEKFIVSDFA 309

Query: 276 RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           +I Y DAI+          NP+   +   +EH  +   + F   + V    +        
Sbjct: 310 QIDYTDAIKVLEQSGKTFENPVAWGIDLSSEHERYLAEQHFKAPVVVKNYPKDIKAFYMR 369

Query: 334 GGGNRAFCDRMNEWARSQG 352
              +      M+  A S G
Sbjct: 370 LNDDNKTVAAMDVLAPSIG 388



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 4/78 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R      +      +G++    +  +       + G  PH G   G +R+V  
Sbjct: 389 EIIGGSQREERLHKLDARMDEMGLN----QQDYSWYRDLRRYGTVPHAGFGLGFERLVAY 444

Query: 550 LLGAKNVREVSLFPMSQN 567
           + G +N+RE   FP +  
Sbjct: 445 VTGVQNIRETIAFPRTPR 462


>gi|239996520|ref|ZP_04717044.1| asparaginyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 465

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 128/385 (33%), Gaps = 51/385 (13%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCI 73
           VG  V + GWV   R    G+ F+ + D       QV+A    + +   + + +   L +
Sbjct: 16  VGESVTVKGWVRTRRDSKAGLSFIALHDGSCFDPVQVIALNSLSNYADIQRLTAGCSLSV 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V     +          +E+ A  +E+L   E         + +      +Y  L  
Sbjct: 76  TGTVKESQGQGQA-------VEIDATDVEVLGWVENPDTYPMAAKRHSIEYLREYAHLRP 128

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG---- 189
           R + +      R  +  ++      + +   STPILTAS  EGA +    S ++      
Sbjct: 129 RTNVIGAVTRVRNCLSQAIHRFFHEKGYFWISTPILTASDTEGAGEMFRVSTLDMMNLPR 188

Query: 190 ----------SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+          Q       +   + +   P FR E+  + R   EF+ 
Sbjct: 189 DDKGNVDYSEDFFGKETYLTVSGQLNVETYCTAMSKVYTFGPTFRAENSNTSRHLAEFWM 248

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFL 275
           ++ E++F E  D+    E++L+ V +                            VS++F+
Sbjct: 249 IEPEVAFAELKDVAQLAEDMLKYVCKAVLEELPDDMAFFAQRIKKDAIERLEKLVSSDFV 308

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
           R+ Y DAI        +   P+      +     E  +  + +      + +    K   
Sbjct: 309 RMDYTDAIEILQNCGKEFEFPVEWG--IDLSSEHERYLAEEHVGAPIIMQNYPKDIKAFY 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 M-RINDDGKTVAAMDVLAPGIGEII 390



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 75/225 (33%), Gaps = 28/225 (12%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FW ++     A +  VA+    +     +  L+    D  FF                + 
Sbjct: 246 FWMIEPEVAFAELKDVAQLAEDMLKYVCKAVLEELPDDMAFFAQRIKKDAIERLEKLVSS 305

Query: 420 IAQELGIINC--------NCFEF--CWIMDFPFYEWNEEEKKIDFAHN---PFTMPQGGM 466
               +   +           FEF   W +D      + E ++     +   P  M     
Sbjct: 306 DFVRMDYTDAIEILQNCGKEFEFPVEWGID-----LSSEHERYLAEEHVGAPIIMQNYPK 360

Query: 467 E----SLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           +     ++ ND     A   D++  G  EI  G  R    +V       +G+SK      
Sbjct: 361 DIKAFYMRINDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVFDARLDEMGLSK----ED 415

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +       + G  PH G   G +R+V  + G +NVR+V  FP + 
Sbjct: 416 YAWYRDLRRYGTVPHSGFGLGFERLVAYVTGMQNVRDVIPFPRTP 460


>gi|109104378|ref|XP_001095858.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
          Length = 501

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 88/379 (23%), Positives = 151/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVVANPDSACFEI---AKSVR 66
           DL +      V +   VH  R  G   FL  R   + +  +V   +    E+   A  + 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKECFLVQRTQGFNVESIVGVGEGDKGELVRFASDIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--------- 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +         
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 118 ----REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                   +  R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------LR 276
           F  LD+EM+F        ++I +TM  + +G+ E F       N       F      LR
Sbjct: 286 FVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    + ++ +    ++F +  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 345 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 394

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 395 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 445

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 446 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501


>gi|154495948|ref|ZP_02034644.1| hypothetical protein BACCAP_00229 [Bacteroides capillosus ATCC
           29799]
 gi|150274831|gb|EDN01887.1| hypothetical protein BACCAP_00229 [Bacteroides capillosus ATCC
           29799]
          Length = 475

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 56/353 (15%), Positives = 108/353 (30%), Gaps = 52/353 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCID 74
           G  V + GW   +R      F+++ D      +    D+      K +  + V   L + 
Sbjct: 29  GQTVTVCGWARTIRDMKTFGFIELNDGSCFRNLQIVMDANVLGNYKEIAGQNVGAALIVT 88

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V+               +E+ A  I +   +         ++ +          L  R
Sbjct: 89  GTVVLTPE-------AKQPLEVKADTIVVEGPSTPDYPLQ--KKRHSVEYLRTIAHLRPR 139

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+   +++        F+   TPI+TAS  EGA +    + ++       
Sbjct: 140 TNLFSAAFRVRSVAAHAIHTFFQDRGFVYVHTPIITASDCEGAGEMFRVTTLDMENLPKK 199

Query: 190 ---------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+   A      Q      A  F   +   P FR E   + R   EF+ +
Sbjct: 200 DDGTVDYSQDFFGKSANLTVSGQLNAENFAMAFGNVYTFGPTFRAEKSNTTRHAAEFWMI 259

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + EM+F +    ++  E +++ +            NF                      R
Sbjct: 260 EPEMAFCDLAGDMDVAEAMIKHIINTVMEKCPDEMNFFNSFVDKGLKERLEHVASSDFGR 319

Query: 277 ICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           + Y +A+     +       +       TEH  +   ++F K + V       
Sbjct: 320 VTYTEAVELLKQNNDKFDYKVEWGCDLQTEHERYLTEQIFKKPVFVTDYPREI 372



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 46/138 (33%), Gaps = 24/138 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P                 F M        + ND     A    LV    EI 
Sbjct: 361 KPVFVTDYP------------REIKAFYM--------RLNDDGKTVAAADCLVPGIGEII 400

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+      +G++       +       + G   H G   G +R+VM L G
Sbjct: 401 GGSQREERLDVLEARIKELGMNP----EDYWWYLDLRRYGGCKHAGFGLGFERMVMYLTG 456

Query: 553 AKNVREVSLFPMSQNFCD 570
             N+R+V   P +    D
Sbjct: 457 IGNIRDVLPHPRTVGNAD 474


>gi|218249572|ref|YP_002374629.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226321988|ref|ZP_03797513.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|218164760|gb|ACK74821.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226232578|gb|EEH31332.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 462

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 133/379 (35%), Gaps = 51/379 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +  + A      +    +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------ 186
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARIRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKLN 185

Query: 187 -------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR-------------------- 276
           ++ EM+F + +D +   E++L+ +     N  +   +FL                     
Sbjct: 246 IEPEMAFYKLNDNIALAEDLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFE 305

Query: 277 -ICYDDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
            I Y  AI      K +    P    ++ T+H  +     F K + V    + +      
Sbjct: 306 VITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETFKKPVVVIDYPKNFKAFYMK 365

Query: 334 GGGNRAFCDRMNEWARSQG 352
              +      M+      G
Sbjct: 366 ANKDNKTVKGMDILVPKIG 384



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 379 LVPKIGEIIGGSEREDDLQKLENRIKELNLNI----EHLNWYLDLRRFGSAPHSGFGLGL 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V    G  N+R+   FP +  
Sbjct: 435 ERLVQYSTGISNIRDSIPFPRTPK 458


>gi|291534318|emb|CBL07430.1| asparaginyl-tRNA synthetase [Roseburia intestinalis M50/1]
          Length = 463

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 57/352 (16%), Positives = 117/352 (33%), Gaps = 51/352 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVL 71
              V   V + GWV  +R      F+ + D      V    +     F+  + +     +
Sbjct: 14  EEYVDQTVTIGGWVRSIRNSKNFGFIVVNDGTFFEPVQVVYSNVLENFDDVEKLNVGAAI 73

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +++               E+ A+KIEI  V+         ++++          L
Sbjct: 74  IVTGKLVATPG-------TKQPFEIQAEKIEIEGVSTPDYPLQ--KKKHSFEYLRTISHL 124

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +T       R+ I  ++       +F+   TP++T S  EGA +    + ++    
Sbjct: 125 RPRTNTFEAVFRVRSLIAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDMNNL 184

Query: 190 ------------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+  P       Q      A  F   +   P FR E+  + R   EF
Sbjct: 185 PKNPDGTVDYSKDFFNKPTNLTVSGQLNGETYAMAFKNIYTFGPTFRAENSNTTRHAAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNN 273
           + ++ E++F + +D +   E++L+ +                            +  +++
Sbjct: 245 WMIEPEIAFADLEDDMILAESMLKYIINYVLENAPEEMAFFNNFIDKGLLERLQHVANSD 304

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
           F R+ Y +A+             +       TEH  +    +F + + V   
Sbjct: 305 FARVTYTEAVEILEKHNDKFEYKVSWGTDLQTEHERYLTEEIFKRPVFVTDY 356



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 51/139 (36%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K        F M          ND     A    LV    EI 
Sbjct: 349 RPVFVTDYP-----KEIK-------AFYMKM--------NDDGKTVAAVDCLVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + +L   + +G+     E  +       + G   H G   G +R VM L G
Sbjct: 389 GGSQREDDYDKLLARINELGLK----EEDYQFYLDLRKYGSARHAGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N C+L
Sbjct: 445 MSNIRDVIPFPRTVNNCEL 463


>gi|196039816|ref|ZP_03107120.1| aspartate--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029519|gb|EDX68122.1| aspartate--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 432

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A F 
Sbjct: 5   MKRSLTKEC----TEKSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVMQCVLENEFAGF- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++  
Sbjct: 60  ---KVDVESIVHVIGEIVETSKTEL-------GVEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLGQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 64/154 (41%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     S+  
Sbjct: 297 GDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTMPNNENSSITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYEMLLDSFKGKGLHP----DKFQSYLNTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|294933203|ref|XP_002780649.1| lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239890583|gb|EER12444.1| lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 622

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 20/267 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG-IIFLDIR-DHYGITQVVANPD---SACFEIA-KSVRSE 68
              G  V L+G     R  G  ++F D+  D + I  +    D      F  A K V   
Sbjct: 154 QHTGDVVCLAGRAMSKRESGKHMVFYDLWEDGHKIQVMSVAQDWTGDVDFATAHKEVHRG 213

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G+V              G++ +   +I +LS      LP        + +RF+ 
Sbjct: 214 DIIGVKGVV---------GKSKRGELSIFPSEIRLLSTC-MHMLPKAQFGLKDQEVRFRQ 263

Query: 129 RFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186
           R+LDL  +   +    +R++II  +R  +    F+E  TP++   +    A+ F+     
Sbjct: 264 RYLDLIMNPHVRETFQRRSQIIGYIRSFLGNRGFMEVETPMMNMIAGGASAKPFITHHNE 323

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  AP+ Y ++L+  G DR F+I   FR+E       P EF   +  M++ + 
Sbjct: 324 LDLDLY-MRIAPELYLKMLVVGGLDRVFEIGKNFRNEGIDLTHNP-EFTSCEFYMAYADY 381

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNN 273
           +D++N  E ++ G+ +       V+ +
Sbjct: 382 NDLMNMTEEMISGMVKSIFGTYMVTFH 408



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 8/108 (7%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++    G EI +     +     L  F+    +K   ++       G   A +
Sbjct: 511 KPGLTERFEGFIMGKEICNAYTELNDPVKQLACFTAQAQAKAEGDDEACDVDNGFVTALE 570

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
            G+PP GG   G+DR+ M L    N++EV L+P        ++  P+ 
Sbjct: 571 YGLPPTGGWGLGVDRLCMFLTDNINIKEVILYP----AMKPIVNKPAE 614


>gi|314954465|gb|EFS98871.1| lysyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
          Length = 1081

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 102/563 (18%), Positives = 177/563 (31%), Gaps = 120/563 (21%)

Query: 7    HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            H  GD+ V   G  + +SG V   R HGG IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626  HRLGDVAVELTGQEMTVSGRVDACRDHGGGIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67   SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
                L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686  HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127  KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
            + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740  RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185  RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   Y L  AP+ Y + LM  G          F                        
Sbjct: 800  NAYDLDLY-LRIAPELYLKRLMVGGA------GRVF------------------------ 828

Query: 245  EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                           +   F N    + +       +A + YG         + M ++T 
Sbjct: 829  --------------EIGRNFRNEGADATHNPEFTMLEAYQAYGDY-------VQMRHLTR 867

Query: 305  HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
                    + S   +   G  V     KG        D  NE           +    ++
Sbjct: 868  EM------ILSAARNATGGTVVRGRDRKGVEH---EIDLANE-----------WHVITVN 907

Query: 365  ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            E         +++ L    T        +   +                 +   H+++ +
Sbjct: 908  EG--------ISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSEHV 959

Query: 425  GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                    E  +  DFP               +P T        L         A ++DL
Sbjct: 960  ------TVEPTFFCDFP------------TDVSPLTRQHRDDPRL---------AEKWDL 992

Query: 485  VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
            +  G E+ +         +  + F+   +                  A +  MPP GG+ 
Sbjct: 993  IIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMG 1052

Query: 541  AGIDRIVMLLLGAKNVREVSLFP 563
             G+DR+VM+L  A ++RE   FP
Sbjct: 1053 MGLDRLVMMLTNA-SIRETISFP 1074


>gi|119509340|ref|ZP_01628489.1| asparaginyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119465954|gb|EAW46842.1| asparaginyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 463

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 72/392 (18%), Positives = 135/392 (34%), Gaps = 56/392 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSE 68
           L   +    + + GWV   R   G  F+++ D   +  + A  +       EI K + + 
Sbjct: 10  LRSGEPDDSLVIQGWVRTKRELKGFAFIEVNDGSSLANLQAVINQDLPDYEEIIKKLNTG 69

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G++++   +         +IEL AQ +++   A+    P+  +R   E +R   
Sbjct: 70  AAVEVSGVLVASQGKG-------QRIELQAQAVKVYGEADPETYPLQKKRHSFEFLR-TI 121

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R ++       R     ++        F+   TPI+TA+  EGA +    + ++ 
Sbjct: 122 GHLRSRTNSFGAVFRVRNACSAAIHEFFQQRGFLWVHTPIITANDCEGAGELFSVTGLDL 181

Query: 189 G--------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+  P       Q +  +MA  F   +  AP FR E+  + R  
Sbjct: 182 KNIPRTKSEAVDYTQDFFGKPTYLTVSGQLEAEVMAMAFSNVYTFAPTFRAENSNTSRHL 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS-------------------- 271
            EF+ ++ EM+F + +  ++  E  L+ VF+                             
Sbjct: 242 AEFWMVEPEMAFCDLEGNMDLAEAFLKHVFKYVLEKCPEDMEFFNQRIDKTVLETADNII 301

Query: 272 -NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            N F R+ Y +A++           P+   +   +EH  +    +F K     P      
Sbjct: 302 NNQFERLTYTEAVKLLEKADVKFEYPVNWGLDLQSEHERYLAEHLFKK-----PVIVTDY 356

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                    R   D     A     P +  I 
Sbjct: 357 PAQIKAFYMRVNDDEKTVRAMDILAPKIGEII 388



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 49/139 (35%), Gaps = 26/139 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEI 491
           +   + D+P                 F M     E +++  D+L+ K           EI
Sbjct: 349 KPVIVTDYP------------AQIKAFYMRVNDDEKTVRAMDILAPKIG---------EI 387

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    EV+ +     G+  E +           + G  PH G   G +R+V  + 
Sbjct: 388 IGGSQREERLEVLERRILAQGMQPEDLW----WYMDLRRYGTVPHAGFGLGFERLVQFMT 443

Query: 552 GAKNVREVSLFPMSQNFCD 570
           G  N+R+V  FP +    +
Sbjct: 444 GMANIRDVIPFPRTPQSAE 462


>gi|228907946|ref|ZP_04071797.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL
           200]
 gi|228851705|gb|EEM96508.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL
           200]
          Length = 428

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 69/279 (24%), Positives = 127/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 1   MKRSLTKEC----TEQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 55

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++  
Sbjct: 56  ---KVDVESVVHVIGEIVETSKTEL-------GVEVLAHEVKVINGAEPLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++  + S    +I  +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVISLRHERTAAIFKVKSTFVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VL+ +F++ +         L+I
Sbjct: 224 ELGFIHDFYEVMQLETDVLQYMFQQVAKKCDKELQLLQI 262



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 63/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     S+  
Sbjct: 293 GDLDTEGEKLLGKYVKEIYNSEFVFITHYP-----------KEARPMYTMPNKENPSITD 341

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+       +F      F+ 
Sbjct: 342 S---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----EKFQSYLNTFRY 388

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 389 GCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 422


>gi|169836741|ref|ZP_02869929.1| lysyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 494

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 63/336 (18%), Positives = 121/336 (36%), Gaps = 24/336 (7%)

Query: 9   CGDLGVSDV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
             ++   D       + +G +   R  G   F  I+D  G  Q     +    +  +  +
Sbjct: 40  IAEINQYDETCDKVFKTAGRIIAFRRMGKNGFGKIQDPTGQIQYYVKKEEVGEDQYEIYK 99

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +    GL      E       TG++ L     E+LS     PLP           R+
Sbjct: 100 KMGLGDFIGL------EGHLFRTKTGELTLRVDSFEVLSK-NVRPLPEKFHGLTNVETRY 152

Query: 127 KYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R++DL     + + + KR ++I   R  +  + F E  TP++   +    AR F+   
Sbjct: 153 RQRYVDLVMNREVMETMKKRFQVIRFFRSYLEKKGFTEVETPMMHPIAGGATARPFVTHH 212

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  + L  AP+ Y + L+  GF++ F+I   FR+E       P EF  +++  ++ 
Sbjct: 213 NALDMELF-LRIAPELYLKRLLVGGFEKVFEINRSFRNEGISVKHNP-EFTMMELYQAYA 270

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +D+++  E+++  +  E      +      I      RR           + M    +
Sbjct: 271 DFNDMMDLTEDLISSLTFELHGKYEIEYEDKTINLAKPWRR-----------VTMKEAVK 319

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
                +F   S         + + IP +       F
Sbjct: 320 EATGFDFDSISSDEEAIEKAKEFGIPLEKDKTYTKF 355



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 7/127 (5%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHM 500
           F+E   EE  I+      T     +  L  N     +   +++L  +G E A+     + 
Sbjct: 361 FFEEKVEETLINPTF--ITEYPKEISPLSKNQKGETEWVDRFELFISGREFANAYSELND 418

Query: 501 SEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                + F      KE  ++   G      RA + GMPP GG+  GIDR+VML   + ++
Sbjct: 419 PRDQKERFEEQVKLKEAGDDEAQGMDLDYIRALEYGMPPAGGLGIGIDRLVMLQTNSASI 478

Query: 557 REVSLFP 563
           R+V LFP
Sbjct: 479 RDVILFP 485


>gi|153808814|ref|ZP_01961482.1| hypothetical protein BACCAC_03114 [Bacteroides caccae ATCC 43185]
 gi|149128640|gb|EDM19858.1| hypothetical protein BACCAC_03114 [Bacteroides caccae ATCC 43185]
          Length = 576

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 60/337 (17%), Positives = 129/337 (38%), Gaps = 11/337 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +    D    V ++G +   R  G   F++++D  G  QV    D  C   
Sbjct: 36  NAFSTDIKAEFKDEDEPRQVSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPGE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + A+K+ +L+ + +    V  +    
Sbjct: 96  DKELYNAVFKRLLDLGDFIGIEGFVFRTQMGEISIHAKKLTVLAKSIKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                   +R++ R++DL  +  + +  +KR  ++ ++R  +    + E  TPIL + + 
Sbjct: 156 YDSFEDPELRYRQRYVDLVVNDGVKETFLKRATVVKTLRNALDEAGYTEVETPILQSIAG 215

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+  GF+  ++I   FR+E       P E
Sbjct: 216 GASARPFITHHNSLDIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT-DKPD 292
           F  +++ + + + + ++N  E +L  +    +       +   I +    RR    D   
Sbjct: 274 FTCMELYVQYKDYNWMMNFTEKLLERICIAVNGCTESVVDGKTISFKAPYRRLPILDAIK 333

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
            +    ++  +E  +    +        +   +   I
Sbjct: 334 EKTGYDLNGKSEEEIRQVCKELKMEEIDDTMGKGKLI 370


>gi|310778303|ref|YP_003966636.1| lysyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747626|gb|ADO82288.1| lysyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 494

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 67/290 (23%), Positives = 125/290 (43%), Gaps = 15/290 (5%)

Query: 7   HSCGDL---GVSDVGSFV-RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           H  G+L    + +  S V + +G +   R  G  +F  I D  G  QV    D+   ++ 
Sbjct: 40  HMVGELLSHTLKEEDSTVFKTAGRIMACRGQGKAVFAHIEDETGRIQVYLRKDTLGDKVF 99

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + V+        G       E        G++ L     E LS     PLP         
Sbjct: 100 EIVKKM------GTGDFVGVEGSLFVTKKGELTLRVAGFEFLSK-NIRPLPEKYHGLTDV 152

Query: 123 SIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDF 180
             R++ R+LDL  +  + +  VKR +I+NS++  + ++ F+E  TPI+        A+ F
Sbjct: 153 ETRYRKRYLDLVMNKEVKETFVKRIQIVNSVKTLLNSKGFMEVETPIMHPIVGGASAKPF 212

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +        + Y L  AP+ Y + L+  GFD+ ++I   FR+E   +   P EF  +++ 
Sbjct: 213 VTHHNTLDMTLY-LRIAPELYLKRLIVGGFDKVYEINRSFRNEGISTRHNP-EFTMMELY 270

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
            ++ + +D+++  E ++    +  +   TV  N   +  ++  R +  D 
Sbjct: 271 QAYADFNDMMDLTEEIIMNAAKTINGTTTVEYNGKELVLENFKRVHMVDF 320



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 6/131 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EE  I          +    + +  D       +++L  +  E A+     +  
Sbjct: 363 FFEQKCEEHIIQPTFVYGHPVEISPLAKRNADDHRF-TDRFELFIDAREYANAFSELNDP 421

Query: 502 EVM-----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                    Q    +  ++E           A + GMPP GG+  GIDR+VMLL GA ++
Sbjct: 422 ADQRGRLEAQLEEAMLGNEEANAEIDDDYIEALEYGMPPTGGLGVGIDRLVMLLTGAPSI 481

Query: 557 REVSLFPMSQN 567
           R+V LFP  + 
Sbjct: 482 RDVILFPQMRK 492


>gi|307611125|emb|CBX00769.1| asparagine tRNA synthetase [Legionella pneumophila 130b]
          Length = 467

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 66/392 (16%), Positives = 124/392 (31%), Gaps = 53/392 (13%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           G++    +   V + GWV   R    G+ F+ + D    + +            K V   
Sbjct: 13  GEIS---IDETVTVRGWVKTRRDSKAGLSFISLHDGSCFSPIQIVATDQLSNYHKEVTK- 68

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
                 G  M  + + + +       E+ A+ IE++   E         + +      + 
Sbjct: 69  ---LTAGCSMIATGKLVASQGRGQFFEIQAESIEVVGWVENPDTYPIQAKRHTLEFLREV 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +T+      R  +  ++      + F    TPI+TAS  EGA +    S ++ 
Sbjct: 126 AHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEGAGEMFRVSTLDL 185

Query: 189 --------------GSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+          Q           + +   P FR E+  + R  
Sbjct: 186 LNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMSKVYTFGPTFRAENSNTSRHL 245

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTV 270
            EF+ ++ E++F   +DI    +N+LR + +                          +  
Sbjct: 246 AEFWMIEPEIAFANLEDICKLSQNMLRYLCKTVLEERSDDMDFFNQFVAPGCIERMEHIA 305

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            + F  + Y DAI+     +     P+   +   +EH  +      +++L   P      
Sbjct: 306 DSEFEIMTYTDAIKALEASEQKFEFPVSWGLDLQSEHERY-----LAEVLCKKPVIVTNY 360

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                G   R   D     A     PG+  I 
Sbjct: 361 PQEIKGFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 6/100 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    E++ +      ++K      +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEILDRRMDECNLNK----EHYQWYRDLRR 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G  PH G   G +R++  + G  NVR+V  FP +    D
Sbjct: 427 YGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRTPGHAD 466


>gi|317153108|ref|YP_004121156.1| lysyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943359|gb|ADU62410.1| lysyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 502

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 63/326 (19%), Positives = 115/326 (35%), Gaps = 17/326 (5%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           L+G V   R  G + F  ++   G  QV A  D    E  +  +   +  I G+      
Sbjct: 67  LAGRVVSYRSFGKVTFFHLQGRGGRIQVYAARDDLGSEDYQLFKKTDIGDIVGI------ 120

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKN 141
                   TG++ +  +  ++++ +   PLP           R++ R++DL       + 
Sbjct: 121 RGSLFRTKTGELTVKTRGFKLITKSLR-PLPEKYHGLKDVETRYRQRYVDLIVTPRTREI 179

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
              RT ++  +R  +  + F+E  TP++ A      A+ F           Y +  AP+ 
Sbjct: 180 FTIRTAVVRELRNFLDEKGFMEVETPMMQAIPGGATAKPFETHHNALDMKLY-MRIAPEL 238

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GFDR ++I   FR+E   +   P EF  L+   ++    D+++  E +   V
Sbjct: 239 YLKRLLVGGFDRVYEINRNFRNEGISTQHNP-EFTMLEFYWAYANFTDLMDLTEEMFSRV 297

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
            E+ +  + V      I               L     +  +                 V
Sbjct: 298 AEKVTGSSVVPYQGEMIDLSV------GAWTRLPFHESLEKIGGIPREVYSDYEQCKALV 351

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNE 346
               E      K G       D + E
Sbjct: 352 RGRGEKVVEGDKLGKLQAKLFDILVE 377



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+   H  +  P       + N+       +++L   G E+A+     +        F
Sbjct: 377 EPKLIQPHFIYHYPTDISPLSRRNEENPDITDRFELFMTGREMANAFSELNDPVDQRGRF 436

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 KE  +           RA + GMPP  G   GIDR+VMLL  + ++REV LFP
Sbjct: 437 EEQVKEKEAGDEEAHFMDEDYVRALEYGMPPAAGQGVGIDRLVMLLTDSASIREVILFP 495


>gi|315126664|ref|YP_004068667.1| asparaginyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015178|gb|ADT68516.1| asparaginyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 465

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 69/387 (17%), Positives = 126/387 (32%), Gaps = 55/387 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCI 73
           V S V + GW+   R    GI FL + D       Q V       ++   S+ +   + +
Sbjct: 16  VDSQVTIKGWIRTRRDSKAGISFLAVHDGSCFDPIQAVVPNSLNNYDEVTSLTAGCSVSV 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+++  + +  +        E+ A  + +L   E         + +      ++  L  
Sbjct: 76  TGVLVQSAGQGQS-------FEIQANSVTVLGWVENPDTYPMSAKRHSIEYLREHAHLRP 128

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ----- 188
           R + +      R  +  ++      + F   STPI+TAS  EGA +    S ++      
Sbjct: 129 RTNMIGAVTRVRNCLAQAIHRFYHEQGFYWISTPIITASDCEGAGEMFRVSTLDMQNLPM 188

Query: 189 ---------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+   A      Q      AS   + +   P FR E+  + R   EF+ 
Sbjct: 189 TDKGEIDYSEDFFGKEAFLTVSGQLNGETYASAMSKIYTFGPTFRAENSNTSRHLAEFWM 248

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFL 275
           ++ E++F + +DI    EN+L+ VF+                            V  +F 
Sbjct: 249 VEPEVAFADLEDIAKLAENMLKYVFKAVLEERRDDMEFFAQRIEKTAISRLEEFVEKDFA 308

Query: 276 RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           ++ Y DA+             +       +EH  +     F   + +             
Sbjct: 309 QVDYTDAVEILKACGKKFEYAVEWGVDLQSEHERYLAEEHFKAPVVIKNYPRDI-----K 363

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIF 360
               R   D     A     PG+  I 
Sbjct: 364 AFYMRQNEDGKTVAAMDVVAPGIGEII 390



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/372 (15%), Positives = 110/372 (29%), Gaps = 43/372 (11%)

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC----- 278
              + R   E+ +   E + +     +      +R    +  +       F  I      
Sbjct: 109 PMSAKRHSIEYLR---EHAHLRPRTNMIGAVTRVRNCLAQAIHRFYHEQGFYWISTPIIT 165

Query: 279 ---YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
               + A   +     D++N + M +  E     +F      L+V+              
Sbjct: 166 ASDCEGAGEMFRVSTLDMQN-LPMTDKGEIDYSEDFFGKEAFLTVSGQLNGETY---ASA 221

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
            ++ +       A +         FW ++     A +  +AK    +     +  L+ + 
Sbjct: 222 MSKIYTFGPTFRAENSNTSRHLAEFWMVEPEVAFADLEDIAKLAENMLKYVFKAVLEERR 281

Query: 396 GDSCFFIAGDPLKFCSFAADAR------------NHIAQELGIINCNCFEFCWIMDFPFY 443
            D  FF         S   +                I +  G      +   W +D    
Sbjct: 282 DDMEFFAQRIEKTAISRLEEFVEKDFAQVDYTDAVEILKACG--KKFEYAVEWGVDL--- 336

Query: 444 EWNEEEKKIDFAHN-----PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIR 497
             +E E+ +   H          P+         +         D+V  G  EI  G  R
Sbjct: 337 -QSEHERYLAEEHFKAPVVIKNYPRDIKAFYMRQNEDGKTVAAMDVVAPGIGEIIGGSQR 395

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               +V+      +G++K      +       + G  PH G   G +R+V  + G  NVR
Sbjct: 396 EERLDVLDARLDEMGLNK----EDYSWYRDLRKYGSVPHSGFGLGFERLVAYVTGMGNVR 451

Query: 558 EVSLFPMSQNFC 569
           +V  FP ++   
Sbjct: 452 DVIAFPRTKGSA 463


>gi|297172686|gb|ADI23653.1| lysyl-tRNA synthetase (class II) [uncultured Gemmatimonadales
           bacterium HF4000_15H13]
          Length = 508

 Score =  187 bits (474), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 62/289 (21%), Positives = 112/289 (38%), Gaps = 22/289 (7%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G L     G    L G +   R HG   F+ + D  G  Q+    D    E    +    
Sbjct: 50  GRLSEDGDGEAAWLGGRIVSWRGHGKSAFVHLEDGDGSIQIYFKKDVLGDESFADLDLMD 109

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE---------- 119
           +    G+      +       TG+I + A+   +L+ +         E +          
Sbjct: 110 LGDWIGV------QGQPFRTRTGEITVRAESYTLLTKSLRPLPFGKVETDAETGERTVHS 163

Query: 120 --YPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
               +  R++ R+ DL     + +    R+RI++++R    +E F+E  TP+L       
Sbjct: 164 GFSDQETRYRQRYADLAVHPEVREVFRTRSRIVSALRSFFDSEGFLEVETPVLQPLYGGA 223

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            A+ F+        + Y L  A + Y + L+  G DR ++IA  FR+E       P EF 
Sbjct: 224 SAKPFVTTHHALDQTMY-LRIADELYLKRLIVGGLDRVYEIAKDFRNEGLSRVHNP-EFT 281

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            L+   +F +  D ++ +E +L  V +      TV+     I ++   +
Sbjct: 282 MLEWYQAFADYRDQMDMVERMLLHVLDSVIGSRTVTYGEHEITFEPPFQ 330



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 64/176 (36%), Gaps = 27/176 (15%)

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKK 451
           + G+S      + LK        R  +  +L   ++  +  +  +++D            
Sbjct: 348 EMGESELRAKAEELKVPDLDGAGRGKLIDKLFGELVEPDLIQPVFVID------------ 395

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                +P  +        +     +    +++L   G E+ +     +      Q F   
Sbjct: 396 -----HPKELSPLAKPHRED----ARVTERFELYIAGAELLNAFSELNDPIDQRQRFEAQ 446

Query: 512 GI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                   +  +       RA + GMPP GG+  G+DR+VM+L    ++R+V LFP
Sbjct: 447 AALLAAGDDEAQQVDEDYIRALEYGMPPTGGVGMGVDRLVMMLTNQTSIRDVILFP 502


>gi|259502149|ref|ZP_05745051.1| asparagine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259169767|gb|EEW54262.1| asparagine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 432

 Score =  187 bits (474), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 77/385 (20%), Positives = 143/385 (37%), Gaps = 40/385 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAK-SVRSE 68
               VG  VR+  W+   R  G I FL +RD  G  Q +    N D   FE+AK  +  E
Sbjct: 9   SPQHVGETVRIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNNVDEETFELAKHDLHQE 68

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
               + G +                 E+    I+++  +++ P    G +E+       +
Sbjct: 69  TSFYVTGEIAEDKRSKF-------GYEIHITDIDVVGTSDDYP---IGNKEHGIDFLLDH 118

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R L LR       +  R+R+  +         F +   PILT S+PEG  +       +Q
Sbjct: 119 RHLWLRSRKPWALMRIRSRVKLATMEFFNKHGFTQFDAPILTGSAPEGTTELFETDYFDQ 178

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            ++  L Q+ Q Y     A    R + + P FR E  ++ R   EF+ ++ EM+++ +D+
Sbjct: 179 SAY--LSQSGQLY-GEAGAMALGRIYTMGPTFRAEKSKTRRHLMEFWMIEPEMAWMHEDE 235

Query: 249 ILNTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPD 292
                E  +  + ++  +                       + R+ Y +AI+       D
Sbjct: 236 NEEIQEQYVAYLIQDLIDHCPLELEMVGRSVESLKPFTELPYPRVTYKEAIKMLQDGGLD 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM---NEWAR 349
           ++      +  E ++  +F+    I +     + + +P          C  +     +  
Sbjct: 296 VKYGDDFGSPEETYLADQFKKPVFIKNYPKEIKAFYMPTNPEDDREVICADLLAPEGYGE 355

Query: 350 SQGQPGLA----YIFWRLDESGNVA 370
             G    A    YI  +L+E+G   
Sbjct: 356 IIGGSERAYDYEYITSKLEENGLSK 380



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 54/163 (33%), Gaps = 27/163 (16%)

Query: 414 ADARNHIAQELGIINC----NCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                    + G        + F+   +I ++P     +E K      NP          
Sbjct: 292 GGLDVKYGDDFGSPEETYLADQFKKPVFIKNYP-----KEIKAFYMPTNP-----EDDRE 341

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +   DLL+ + +         EI  G  R +  E +       G+SK      +G     
Sbjct: 342 VICADLLAPEGYG--------EIIGGSERAYDYEYITSKLEENGLSK----ENYGWYDDL 389

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            + G  PH G   G++R +  +    ++RE   FP   N  + 
Sbjct: 390 RKYGSVPHSGFGMGLERFLAWVTLQDHIRENIPFPRMLNRLNP 432


>gi|56460435|ref|YP_155716.1| asparaginyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81363174|sp|Q5QZ13|SYN_IDILO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|56179445|gb|AAV82167.1| Asparaginyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 466

 Score =  187 bits (474), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 59/317 (18%), Positives = 108/317 (34%), Gaps = 25/317 (7%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V   V + GWV   R    GI F+++ D      + A   +     +  V+        G
Sbjct: 16  VDETVTVRGWVRTRRDSKAGISFINLHDGSCFDAIQAVVPAELPNYSNEVQK----LTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             ++ +   + +       EL A K+ +    E+        + +      +Y  L  R 
Sbjct: 72  CSVAITGVVVPSQGKGQSFELQATKVHVYGWVEDPDTYPMAPKRHSMEYLREYAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +     +  R  +  ++      E ++  STPI+T S  EGA +    S ++        
Sbjct: 132 NITGAVMRVRNALSQAIHRFFHEEGYLWVSTPIITTSDCEGAGEMFRVSTLDMLNIPKTD 191

Query: 189 -------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 KGEVDYSEDFFGKEAFLTVSGQLNVESYACSLSKVYTFGPTFRAENSNTSRHLSEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTDKPDLRNP 296
            E++F   DD+    E +L+ VF+           F   RI  D   R       D    
Sbjct: 252 PELAFATLDDVAGLAEAMLKYVFKAVLEERPDDMAFFAERINSDAISRLEAIVNNDF-VH 310

Query: 297 IIMHNVTEHFVHSEFRV 313
           +   +  E   + + + 
Sbjct: 311 MDYTDAIEILKNCDRKF 327



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 19/143 (13%)

Query: 443 YEWNEEEK-KIDFAHNPFTMPQG-GMESLKGNDLLSIKAF------------QYDLVCNG 488
           +E+  E    +   H  +   +  G   +  N    IKAF              D++  G
Sbjct: 327 FEYAVEWGVDLQSEHERYLAEEHVGAPIILKNYPRDIKAFYMRQNEDGKTVAAMDVLAPG 386

Query: 489 F-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             EI  G  R    +++ Q    + + K      +G      + G  PH G   G +R+V
Sbjct: 387 IGEIIGGSAREERLDILDQRIDEMNLPK----EEYGFYRDLRRYGTVPHAGFGLGFERLV 442

Query: 548 MLLLGAKNVREVSLFPMSQNFCD 570
             + G +N+R+V  FP +    +
Sbjct: 443 AYVTGVQNIRDVIPFPRAPKSAE 465


>gi|195941839|ref|ZP_03087221.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 80a]
          Length = 462

 Score =  187 bits (474), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 133/379 (35%), Gaps = 51/379 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +  + A      +    +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------ 186
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKLN 185

Query: 187 -------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NAPSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR-------------------- 276
           ++ EM+F + +D +   E++L+ +     N  +   +FL                     
Sbjct: 246 IEPEMAFYKLNDNIALAEDLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFE 305

Query: 277 -ICYDDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
            I Y  AI      K +    P    ++ T+H  +     F K + V    + +      
Sbjct: 306 VITYTKAIEILENSKKNFEIKPCWGIDLQTDHERYLTEETFKKPVVVIDYPKNFKAFYMK 365

Query: 334 GGGNRAFCDRMNEWARSQG 352
              +      M+      G
Sbjct: 366 ANKDNKTVKGMDILVPKIG 384



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 379 LVPKIGEIIGGSEREDDLQKLENRIKELNLNI----EHLNWYLDLRRFGSAPHSGFGLGL 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V    G  N+R+   FP +  
Sbjct: 435 ERLVQYSTGISNIRDSIPFPRTPK 458


>gi|167632830|ref|ZP_02391156.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|254743599|ref|ZP_05201284.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|167531642|gb|EDR94307.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0442]
          Length = 432

 Score =  187 bits (474), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 72/279 (25%), Positives = 127/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T           G  V L GWV ++R  G + FL +RD  G+ Q V   + A F 
Sbjct: 5   MKRSLTKE----RTEKSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGF- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++  
Sbjct: 60  ---KVDVESIVHVIGEIVETSKTEL-------GVEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 68/164 (41%), Gaps = 28/164 (17%)

Query: 406 PLKFCSFA--ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
             K+C  +   D      + LG      +  EF +I  +P             A   +TM
Sbjct: 287 KSKYCKESPVGDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTM 335

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P     ++  +         +DL+  G EI SG  R H  E++L +F   G+      ++
Sbjct: 336 PNNENSAITDS---------FDLLYKGLEITSGAQRIHNYEMLLDSFKEKGLHP----DK 382

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           F      F+ G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 383 FQSYLNTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|18312116|ref|NP_558783.1| aspartyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|62287581|sp|Q8ZYM8|SYD_PYRAE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|18159548|gb|AAL62965.1| aspartyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 428

 Score =  187 bits (474), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 73/270 (27%), Positives = 133/270 (49%), Gaps = 14/270 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---A 57
           M+  +TH   ++  +  G+ V ++GWV  +R  G + F+ +RD  G  QV          
Sbjct: 1   MYPKKTHWTAEITPNLHGTEVVVAGWVWELRDIGRVKFVVVRDREGFVQVTLKAGKTPDH 60

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            F++   +  E V+ I G+V +       + I    +E+   +I IL+ A+ LP+ ++ E
Sbjct: 61  LFKVFAELSREDVVVIKGIVEA-------SKIAKSGVEIFPSEIWILNKAKPLPIDIWSE 113

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                + R K+R +DL+R          + ++ S+R  +  E F+E  TP +  +S EG 
Sbjct: 114 TP-DLATRLKWRSVDLKRPRNLVVFTVASAMLRSIREVLYGEGFVEVFTPKIIVTSTEGG 172

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +        + ++  L Q+PQ YK+ L AS  +R F+I P +R E   +D    EF  +
Sbjct: 173 AELFPVMYFERVAY--LSQSPQLYKEQLTAS-LERVFEIGPAYRAEKHNTDYHLNEFISV 229

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
           D E +F++ +DI++ +E ++R +    S  
Sbjct: 230 DAEAAFMDYNDIMDILEKIMRRLASTVSEY 259



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 26/137 (18%)

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            +I++FP             +  PF   +   E          K+  YDL+ NG E+ASG
Sbjct: 318 YFIVNFP------------ASLRPFYTKRKDGE----------KSESYDLIINGIEVASG 355

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
             R H  + + +     G+   +    F      F  GMPPH G   G +R+V  LLG  
Sbjct: 356 ATRIHKRDELEEEMKKRGLDPRL----FESHLSVFDYGMPPHAGFGLGFNRLVTALLGLD 411

Query: 555 NVREVSLFPMSQNFCDL 571
           NVR  +L+P  +   + 
Sbjct: 412 NVRHATLYPRDRYRVEP 428


>gi|20089645|ref|NP_615720.1| lysyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|39932434|sp|Q8TSN5|SYK2_METAC RecName: Full=Lysyl-tRNA synthetase 2; AltName: Full=Lysine--tRNA
           ligase 2; Short=LysRS 2
 gi|19914568|gb|AAM04200.1| lysyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 511

 Score =  186 bits (473), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 66/304 (21%), Positives = 129/304 (42%), Gaps = 26/304 (8%)

Query: 2   HRYRTHSCGDLGV---------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           + YR    GD+            + G  VR +G ++ +R HG +IF D+ D  G  QV+ 
Sbjct: 47  YPYRFEKNGDICEILVKFEDFEKNEGLSVRTAGRLYNIRKHGKMIFADLGDQTGRIQVLI 106

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
              +   E   + ++   L   G ++    E        G+  +S  +  +LS +    L
Sbjct: 107 RKGNLPDEEFATFKN---LMDSGDIIGIQGELFRTK--RGENSISVSEFSLLSKSL-CAL 160

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA 171
           P           R++ R+LDL  +   +   V R+++I+ +R  +    F+E  TPIL  
Sbjct: 161 PEKFHGLKDVETRYRKRYLDLIVNAEKREIFVMRSKLISEIRRFLADREFLEFETPILQT 220

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                            G    L  AP+ Y + L+  G+++ F+I+  FR+ED  +   P
Sbjct: 221 VYGGANARPFKTFHNCLGQNLFLRIAPELYLKRLVVGGYEKVFEISKNFRNEDIDTTHNP 280

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS---------NGNTVSNNFLRICYDDA 282
            EF  +++  ++ + +D+++  E ++  +    +         N   + + + RI  + A
Sbjct: 281 -EFTMIEVYEAYRDYNDMMDLTEALISELVFRLTGGYEVKMGENTINLRSPWKRISMEGA 339

Query: 283 IRRY 286
           ++ Y
Sbjct: 340 LKEY 343



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 56/147 (38%), Gaps = 25/147 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G++        +I DFP      E   +   H                        +++L
Sbjct: 384 GLVEDKLVNPTFIYDFPV-----ENSPLAKNHR----------------EKEGFVERFEL 422

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIA 540
             NG+E+A+G    +      + F      ++      +        A   G+PP GG+ 
Sbjct: 423 FLNGWELANGYSELNDPLEQEKRFEEQDKKRKLGDLEAQTVDYDFINALGYGLPPTGGMG 482

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            GIDR+ M+L G ++++EV LFP  + 
Sbjct: 483 LGIDRLTMILAGLESIKEVILFPQMKR 509


>gi|160890593|ref|ZP_02071596.1| hypothetical protein BACUNI_03038 [Bacteroides uniformis ATCC 8492]
 gi|270295728|ref|ZP_06201928.1| asparaginyl-tRNA synthetase [Bacteroides sp. D20]
 gi|317479867|ref|ZP_07938985.1| asparaginyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|156859592|gb|EDO53023.1| hypothetical protein BACUNI_03038 [Bacteroides uniformis ATCC 8492]
 gi|270273132|gb|EFA18994.1| asparaginyl-tRNA synthetase [Bacteroides sp. D20]
 gi|316903976|gb|EFV25812.1| asparaginyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 467

 Score =  186 bits (473), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 59/295 (20%), Positives = 107/295 (36%), Gaps = 29/295 (9%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L   D G+ V + GWV   R    + F+ + D   I  V    D   F
Sbjct: 1   MEKISRTKIVDLLKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLGNF 60

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+ K + +   L ++G++         A       E+ A++IE+L   +        +
Sbjct: 61  DEEMLKEITTGACLSVNGVLTESVGSGQKA-------EVQAREIEVLGTCDNTYPLQ--K 111

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           + +      +   L  R +T       R  +  ++        F    TPI+TAS  EGA
Sbjct: 112 KGHSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHDRGFFYFHTPIITASDCEGA 171

Query: 178 RDFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
                 +  N                 F+    +     Q +  L A+     +   P F
Sbjct: 172 GQMFQVTTKNLYDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F +  D ++  E+ ++   +   +       FL
Sbjct: 232 RAENSNTPRHLAEFWMIEPEVAFNDITDNMDLAEDFIKYCVQWALDNCADDVKFL 286



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L     EI  G  R      ++     + I  + +           + G  PH G   G 
Sbjct: 384 LFPKIGEIIGGSERESDYNKLMTRIDELHIPMKDMW----WYLDTRKFGTCPHSGFGLGF 439

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+++ + G  N+R+V  FP +  
Sbjct: 440 ERLLLFVTGMTNIRDVIPFPRTPR 463


>gi|170017769|ref|YP_001728688.1| lysyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|238688932|sp|B1MVJ0|SYK_LEUCK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|169804626|gb|ACA83244.1| Lysyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 493

 Score =  186 bits (473), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 73/331 (22%), Positives = 133/331 (40%), Gaps = 23/331 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IAKSVRSEWVLCIDGLV 77
            V ++G +   R  G +IF D RD  G  QV A  D       I K       L I G++
Sbjct: 61  EVVIAGRMIAKRGAGKVIFADFRDVSGKIQVYAKRDDLGENYPIIKRADLGDFLGIKGII 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           M   A         G++ + A ++  L+ A   P+P           R++ R+LDL  + 
Sbjct: 121 MKTEA---------GELTVLATELTHLTKALR-PMPDKFHGIADVETRYRKRYLDLIANE 170

Query: 138 LHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
                   R++II+++R  M +++F+E  TPIL T +    AR F+          Y + 
Sbjct: 171 ESFKKFQLRSKIISAIRAYMDSQDFMEVETPILQTEAGGAAARPFITHHNALNIDMY-MR 229

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + Y + L+  GF+R ++I   FR+E       P EF  ++   ++++  D+++  E 
Sbjct: 230 IATELYLKRLVVGGFERVYEIGRIFRNEGMDPKHNP-EFTTMETYAAYMDFTDVMDETEG 288

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           + +      S+        L++ Y       G++        ++   T      +  V +
Sbjct: 289 IFKAAASVVSDD-------LKVTYQGTEIDLGSNFARKHMVDLIKEQTGIDFWQDMSVEA 341

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                +  +  +      G    AF +   E
Sbjct: 342 AQKLADDKHVKYEKYWGVGHIINAFFEEFVE 372



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 10/157 (6%)

Query: 418 NHIAQELGIINCNCFEFCW----IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
              AQ+L       +E  W    I++  F E+ E+   +      +  P       K N 
Sbjct: 339 VEAAQKLADDKHVKYEKYWGVGHIINAFFEEFVEDT--LVQPTFVYGHPVEVSPLAKRNA 396

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAF 529
             S    +++L   G E  +     +        F      +E      EN       A 
Sbjct: 397 EDSRFTDRFELFIMGSEYGNAFTELNDPIDQRARFEAQVAERENGNDEAENIDEDFIEAL 456

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP GG+  GIDR+VMLL  +  +R+V LFP  +
Sbjct: 457 EYGMPPTGGLGIGIDRLVMLLTDSDTIRDVLLFPTMR 493


>gi|110639549|ref|YP_679759.1| asparaginyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|122966545|sp|Q11Q97|SYN_CYTH3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|110282230|gb|ABG60416.1| asparagine--tRNA ligase [Cytophaga hutchinsonii ATCC 33406]
          Length = 464

 Score =  186 bits (473), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 58/292 (19%), Positives = 107/292 (36%), Gaps = 23/292 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R +           +   V L GWV   R +  + F+ + D   I  +         +
Sbjct: 1   MKRIKIKELLSNSSQYIDQQVVLKGWVRTKRGNKHVAFVALNDGSTIHTIQI-----VLD 55

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +AK    +      G  +S S + + +      IE+    +E++ VA+    P+  +   
Sbjct: 56  VAKFNEEQLKDVTTGACISISGKVVTSQGAGQSIEVQGDTLEVIGVADPETYPLQKKGHS 115

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +   L  R +T    +  R  +  ++      + F+   TPI+T S  EGA   
Sbjct: 116 LEFLR-EIAHLRPRTNTFSCVLRLRHAMAFAVHSFFNEKGFVYVHTPIITGSDAEGAGAM 174

Query: 181 LVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
              + ++                 F+          Q +  L A      +   P FR E
Sbjct: 175 FQVTTLDLKNPSKTKEGEVDFTKDFFGKATNLTVSGQLEGELAAMALGEVYTFGPTFRAE 234

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +  + R   EF+ ++ EM+F E  D ++  E  L+ + +   +      NFL
Sbjct: 235 NSNTTRHLAEFWMIEPEMAFYEIQDNMDLAEEFLKYLVKYALDNCIDDLNFL 286



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 14/120 (11%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSN 510
              A   F M           D  +++A   D++  G  EI  G  R    E + +    
Sbjct: 357 YPKAIKAFYMKANE-------DGKTVRAM--DVLFPGIGEIIGGSQREDNLEKLQERCKE 407

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           VGI +  +           + G  PH G   G +R+++ + G  N+R+V  FP +    +
Sbjct: 408 VGIHENDIW----WYLETRKFGSAPHSGFGLGFERLMLFVTGMGNIRDVIPFPRTPQSAE 463


>gi|3582260|gb|AAC35210.1| lysyl-tRNA synthetase [Sinorhizobium meliloti]
          Length = 498

 Score =  186 bits (473), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 62/294 (21%), Positives = 125/294 (42%), Gaps = 22/294 (7%)

Query: 2   HRYRTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +L          ++ G  V ++G V   R  G  +F+D+ D  G  Q+ ++
Sbjct: 36  HFHRTLTNAELAEKYAGLEPDTESGETVTVAGRVFSSRNSG--MFMDLHDASGKIQIFSH 93

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D+A  E    +    +    G ++  + E        G++ ++A++I +L  +  LP+P
Sbjct: 94  KDTAPEEARALLPMIDL----GDIIGVTGEVRRTK--RGELTVNAKEITMLCKSL-LPMP 146

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                      R++ R+LD+  +   K    +R+RI++S+R  +  E F+E  TP+L   
Sbjct: 147 EKYHGLADIETRYRKRYLDIMVNEESKLRFQQRSRIVSSLRRFLEDEGFMEVETPMLQPI 206

Query: 173 SPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRL 230
                A  F       +   Y L  A + Y   ++ SG  D+ F+I   FR+E   +   
Sbjct: 207 YGGATAEPFKTHHNTLKLDMY-LRIAAELYLNAILVSGLTDKVFEINRNFRNEGVSTRHN 265

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           P EF  ++   ++ + +D++  +E +   +               ++ +     
Sbjct: 266 P-EFTMMECYWAYADYEDVMGLVERMFETLALAVHGKTEFEFGDKQLSFKGPFP 318



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 49/133 (36%), Gaps = 5/133 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E   I  AH     P+      K          +++  CNG+EI +     +  
Sbjct: 367 LFEEKVEATLIQPAHVI-HFPKDISPFAKEVPGEPRLVERFETYCNGWEIGNAFSELNDP 425

Query: 502 EVMLQAFSNVGISKEVVENR----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                              +          A   GMPP GG+  G+DR++MLL  + ++R
Sbjct: 426 VEQRARMVEQMEQAHARGEKEKTLDEDFLDAMDQGMPPAGGLGIGVDRLIMLLTNSPSIR 485

Query: 558 EVSLFPMSQNFCD 570
           ++ LFP  +   D
Sbjct: 486 DIILFPARRQKAD 498


>gi|148359826|ref|YP_001251033.1| asparaginyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|296107873|ref|YP_003619574.1| asparaginyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|259511569|sp|A5IE87|SYN_LEGPC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148281599|gb|ABQ55687.1| asparaginyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|295649775|gb|ADG25622.1| asparaginyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 467

 Score =  186 bits (473), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 65/392 (16%), Positives = 123/392 (31%), Gaps = 53/392 (13%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           G++    +   V + GWV   R    G+ F+ + D    + +            K V   
Sbjct: 13  GEIS---IDETVTVRGWVKTRRDSKAGLSFISLHDGSCFSPIQIVATDQLSNYHKEVTK- 68

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
                 G  M  + + + +       E+ A+ IE++   E         + +      + 
Sbjct: 69  ---LTAGCSMVATGKLVASQGKGQFFEIQAESIEVVGWVENPDTYPIQAKRHTLEFLREV 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +T+      R  +  ++      + F    TPI+TAS  EGA +    S ++ 
Sbjct: 126 AHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEGAGEMFRVSTLDL 185

Query: 189 --------------GSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+          Q           + +   P FR E+  + R  
Sbjct: 186 LNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMSKVYTFGPTFRAENSNTSRHL 245

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTV 270
            EF+ ++ E++F   +DI    +++LR + +                          +  
Sbjct: 246 AEFWMIEPEIAFANLEDICKLSQSMLRYLCKTVLEERADDMDFFNQFVAPGCIERMEHIA 305

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            + F  + Y DAI+           P+   +   +EH  +      +++L   P      
Sbjct: 306 DSEFEMMTYTDAIKALEASDQKFEFPVSWGLDLQSEHERY-----LAEVLCKKPVIVTNY 360

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                G   R   D     A     PG+  I 
Sbjct: 361 PQEIKGFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 6/100 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    E++ +      ++K      +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEILDRRMDECNLNK----EHYQWYRDLRR 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G  PH G   G +R++  + G  NVR+V  FP +    D
Sbjct: 427 YGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRTPGHAD 466


>gi|55741590|ref|NP_001006528.1| aspartyl-tRNA synthetase, cytoplasmic [Gallus gallus]
 gi|53133418|emb|CAG32038.1| hypothetical protein RCJMB04_16g5 [Gallus gallus]
          Length = 503

 Score =  186 bits (473), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 87/381 (22%), Positives = 149/381 (39%), Gaps = 47/381 (12%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKS 64
             D         V + G VH  R  G   FL +R        +  V  +      + A +
Sbjct: 50  IKDQTEEKADEVVWVRGRVHTSRAKGKQCFLVLRQQQFNIQALVAVGQHASKQMVKFAAN 109

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE-- 122
           +  E ++ ++G+V  R A           +EL  Q+I ++S+AE        +   PE  
Sbjct: 110 INKESIVDVEGVV--RKAHQKIGGCTQQDVELHVQRIYVISLAEPRLPLQLDDAVRPEVE 167

Query: 123 -----------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
                        R   R +DLR  T       ++ I    R  +I + F+E  TP + +
Sbjct: 168 GEEDGRATVNQDTRLDNRVIDLRTSTSQAVFCLQSGICQLFRETLIRKGFVEIQTPKIIS 227

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F + P FR ED  + R  
Sbjct: 228 AASEGGANVFTVSYFKSSAYLA--QSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHL 285

Query: 232 GEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNFL---------- 275
            EF  LD+EM+F        D+I +T+  + +G+ E F +    V+  F           
Sbjct: 286 TEFVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQAEIQMVNKQFPCEPFKFLEPT 345

Query: 276 -RICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYE 325
            R+ Y +A+           D+ DL  P    +  + +    ++F +  K  L+V P Y 
Sbjct: 346 LRLEYREAVAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFYT 405

Query: 326 VWAIPAKGGGGNRAFCDRMNE 346
           +          +     R  E
Sbjct: 406 MPDPVNPKNSNSYDMFMRGEE 426



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF              +    +  YD+   G EI SG  R H  +++ +   +
Sbjct: 395 KYPLAVRPFYTMPD--------PVNPKNSNSYDMFMRGEEILSGAQRIHDPQLLTERAKH 446

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP       
Sbjct: 447 HGIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRDPKRLT 502

Query: 571 L 571
            
Sbjct: 503 P 503


>gi|77360557|ref|YP_340132.1| asparaginyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|123588153|sp|Q3IGU4|SYN_PSEHT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|76875468|emb|CAI86689.1| asparaginyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 465

 Score =  186 bits (473), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 67/387 (17%), Positives = 126/387 (32%), Gaps = 55/387 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCI 73
           V S V + GW+   R    GI FL + D       Q V       ++   S+ +   + +
Sbjct: 16  VDSQVTVKGWIRTRRDSKAGISFLAVHDGSCFDPIQAVVPNSLNNYDEVTSLTAGCSVSV 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+++  + +  +        E+ A  + +L   E         + +      ++  L  
Sbjct: 76  TGVLVQSAGQGQS-------YEIQANSVTVLGWVENPDSYPMAAKRHSIEYLREHAHLRP 128

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ----- 188
           R + +      R  +  ++      + F+  STPI+TAS  EGA +    S ++      
Sbjct: 129 RTNMIGAVTRVRNCLAQAIHRFYHEQGFLWISTPIITASDCEGAGEMFRVSTLDMQNLPL 188

Query: 189 ---------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+   A      Q      AS   + +   P FR E+  + R   EF+ 
Sbjct: 189 TDKGEVDYSEDFFGKEAFLTVSGQLNGETYASAMSKIYTFGPTFRAENSNTSRHLAEFWM 248

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFL 275
           ++ E++F + +DI    E +L+ VF+                            V  +F 
Sbjct: 249 VEPELAFADLEDIAKLAEQMLKYVFKAVLEERRDDMEFFAQRVEKTAITRLEEFVEKDFA 308

Query: 276 RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           ++ Y +A+             +       +EH  +     F   + +             
Sbjct: 309 QVDYTEAVEILKACGKKFEYAVEWGVDLQSEHERYLAEEHFKAPVVIKNYPRDI-----K 363

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIF 360
               R   D     A     PG+  I 
Sbjct: 364 AFYMRQNEDGKTVAAMDIVAPGIGEII 390



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 74/228 (32%), Gaps = 28/228 (12%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR-- 417
           FW ++     A +  +AK    +     +  L+ +  D  FF         +   +    
Sbjct: 246 FWMVEPELAFADLEDIAKLAEQMLKYVFKAVLEERRDDMEFFAQRVEKTAITRLEEFVEK 305

Query: 418 ----------NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN-----PFTMP 462
                       I +  G      +   W +D      +E E+ +   H          P
Sbjct: 306 DFAQVDYTEAVEILKACG--KKFEYAVEWGVDL----QSEHERYLAEEHFKAPVVIKNYP 359

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           +         +         D+V  G  EI  G  R    +++      +G++K    + 
Sbjct: 360 RDIKAFYMRQNEDGKTVAAMDIVAPGIGEIIGGSQREERLDILDARLDEMGLNK----DD 415

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           +       + G  PH G   G +R+V  + G  NVR+V  FP ++   
Sbjct: 416 YSWYRDLRKYGTVPHSGFGLGFERLVAYVTGMGNVRDVIAFPRTKGSA 463


>gi|304382273|ref|ZP_07364780.1| asparagine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304336630|gb|EFM02859.1| asparagine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 467

 Score =  186 bits (473), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 57/290 (19%), Positives = 113/290 (38%), Gaps = 28/290 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIA 62
           RT     L  +D G+ V + GWV   R    + F+ + D   I  V    N  +   +  
Sbjct: 6   RTKIVDVLKSTDFGATVNVRGWVRTHRSSKAVDFIALNDGSTIKNVQIVVNTSTTDEQTL 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +   L + G ++    +  +       +E+  + I+I  +      P+  + +  E
Sbjct: 66  RQITTGSCLSVTGTLVESQGKGQS-------VEIQCKDIKIYGLCGSDY-PMQKKGQTFE 117

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +Y  L LR +T       R  +  ++        F    TPI+TAS  EGA     
Sbjct: 118 YMR-QYGHLRLRTNTFGAVFRIRHHMAIAIHQFFHDRGFFYFHTPIITASDAEGAGQMFQ 176

Query: 183 PSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDP 225
            +  N                 F+    +     Q +  L A+   + +   P FR E+ 
Sbjct: 177 VTTQNLYDLKKDEKGKIKYDDDFFGKMTSLTVSGQLEGELGATSLGQIYTFGPTFRAENS 236

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + R   EF+ ++ E++F++ +D+++  E+ ++   +   +       FL
Sbjct: 237 NTPRHLAEFWMIEPEVAFIDLNDLMDLEEDFIKYCVQWALDHCQDDLEFL 286



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 10/143 (6%)

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAH--NPFTMPQGGME----SLKGNDLLSIKAFQYDL 484
             +F + + +     +E E+ +   H   P  M     E     +K ND          L
Sbjct: 325 GHKFEFPVSWGMDLASEHERYLVEEHFKRPVIMTDYPKEIKAFYMKLNDDNKTVQGTDVL 384

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
                EI  G +R      +++      I  + +           + G  PHGG   G +
Sbjct: 385 FPQIGEIIGGSVREEDYGKLMEQIEERHIPMKDMW----WYLDTRKYGTCPHGGFGLGFE 440

Query: 545 RIVMLLLGAKNVREVSLFPMSQN 567
           R+++ + G +N+R+V  FP +  
Sbjct: 441 RLILFVTGMQNIRDVVPFPRTPK 463


>gi|223889109|ref|ZP_03623698.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|224534013|ref|ZP_03674597.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|223885358|gb|EEF56459.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|224512849|gb|EEF83216.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
          Length = 462

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 133/379 (35%), Gaps = 51/379 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +  + A      +    +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------ 186
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKLN 185

Query: 187 -------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR-------------------- 276
           ++ EM+F + +D +   E++L+ +     N  +   +FL                     
Sbjct: 246 IEPEMAFYKLNDNIALAEDLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFE 305

Query: 277 -ICYDDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
            I Y  AI      K +    P    ++ T+H  +     F K + V    + +      
Sbjct: 306 VITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETFKKPVVVIDYPKNFKAFYMK 365

Query: 334 GGGNRAFCDRMNEWARSQG 352
              +      M+      G
Sbjct: 366 ANKDNKTVKGMDILVPKIG 384



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 379 LVPKIGEIIGGSEREDDLQKLENRIKELNLNI----EHLNWYLDLRRFGSAPHSGFGLGL 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V    G  N+R+   FP +  
Sbjct: 435 ERLVQYSTGISNIRDSIPFPRTPK 458


>gi|226320706|ref|ZP_03796264.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233922|gb|EEH32645.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 462

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 133/379 (35%), Gaps = 51/379 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +  + A      +    +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------ 186
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKLN 185

Query: 187 -------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR-------------------- 276
           ++ EM+F + +D +   E++L+ +     N  +   +FL                     
Sbjct: 246 IEPEMAFYKLNDNIALAEDLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFE 305

Query: 277 -ICYDDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
            I Y  AI      K +    P    ++ T+H  +     F K + V    + +      
Sbjct: 306 VITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETFKKPVVVIDYPKNFKAFYMK 365

Query: 334 GGGNRAFCDRMNEWARSQG 352
              +      M+      G
Sbjct: 366 ANKDNKTVKGMDILVPKIG 384



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 379 LVPKIGEIIGGSEREDDLQKLENRIKELNLNI----EHLNWYLDLRRFGSAPHSGFGLGL 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V    G  N+R+   FP +  
Sbjct: 435 ERLVQYSTGISNIRDSIPFPRTPK 458


>gi|221217364|ref|ZP_03588835.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|221192642|gb|EEE18858.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 72a]
          Length = 462

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 133/379 (35%), Gaps = 51/379 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +  + A      +    +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------ 186
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKLN 185

Query: 187 -------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NTLSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR-------------------- 276
           ++ EM+F + +D +   E++L+ +     N  +   +FL                     
Sbjct: 246 IEPEMAFYKLNDNIALAEDLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFE 305

Query: 277 -ICYDDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
            I Y  AI      K +    P    ++ T+H  +     F K + V    + +      
Sbjct: 306 VITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETFKKPVVVIDYPKNFKAFYMK 365

Query: 334 GGGNRAFCDRMNEWARSQG 352
              +      M+      G
Sbjct: 366 ANKDNKTVKGMDILVPKIG 384



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 379 LVPKIGEIIGGSEREDDLQKLENRIKELNLNI----EHLNWYLDLRRFGSAPHSGFGLGL 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V    G  N+R+   FP +  
Sbjct: 435 ERLVQYSTGISNIRDSIPFPRTPK 458


>gi|120437254|ref|YP_862940.1| lysyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|254782473|sp|A0M5H8|SYK_GRAFK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|117579404|emb|CAL67873.1| lysyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 569

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 66/338 (19%), Positives = 125/338 (36%), Gaps = 30/338 (8%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCI 73
           + G  V ++G +   R  G   F +++D  G  QV  N D  C   + +K       L  
Sbjct: 51  EEGKNVVIAGRLMSRRIQGKASFAELQDSKGRIQVYFNRDEICTGEDKSKYNDLYKKLLD 110

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRF 126
            G  +    E     +  G++ +  +   +LS A         ++E            R+
Sbjct: 111 IGDFIGIEGELFKTQV--GEMTVMVKDFHLLSKALRPLPLPKTDKEGNTHDGFNDPEQRY 168

Query: 127 KYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+ DL     + +  VKRT++ N+MR       + E  TPIL +      AR F+   
Sbjct: 169 RQRYADLAVNPKVKEIFVKRTKLFNAMRNFFNEREYFEVETPILQSIPGGAAARPFVTHH 228

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ 
Sbjct: 229 NALDIPLY-LRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYK 286

Query: 245 EQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY------GTD 289
           + + ++   E +L    E  +                 + R+   DAI  Y      G  
Sbjct: 287 DYNWMMEFTEQLLEHCAEAVNGTTDATFGEHKINFKAPYKRLSMTDAIIEYTGFDITGKS 346

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           + +L       ++       + ++  +I       +  
Sbjct: 347 EKELYEAAKGMDIEVDDTMGKGKLIDEIFGEKCEGKFI 384



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K          P+      K +        +++L+  G EIA+     +      + F
Sbjct: 380 EGKFIQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSELNDPLDQRERF 439

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  E  ++          R+ + GMPP  G+  G+DR++M L   ++++EV  FP 
Sbjct: 440 EEQLKLSEKGDDEAMFIDNDFLRSLEYGMPPTSGLGIGMDRLIMFLTNKQSIQEVLFFPQ 499

Query: 565 SQ 566
            +
Sbjct: 500 MK 501


>gi|325268749|ref|ZP_08135377.1| asparagine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324988917|gb|EGC20872.1| asparagine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 476

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 57/292 (19%), Positives = 115/292 (39%), Gaps = 26/292 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC 58
           +   RT     L  +D G  + + GWV   R    + F+ + D   I   QVV +P    
Sbjct: 12  IEMKRTKIVDALACTDFGKDINVKGWVRSHRSSKAVDFIALNDGSTIKNIQVVVDPSKMD 71

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            +  KS+ +   + I G ++    +   +       E+  +++EI  +      P+  + 
Sbjct: 72  ADELKSITTGVCISIVGTLVESQGKGQTS-------EIQCKEVEIYGLC-PSDYPMQKKG 123

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +  E +R KY  + LR +T       R  +  ++        F    TP++T S  EGA 
Sbjct: 124 QSFEYMR-KYGHMRLRTNTFGAVFRIRHNMAIAIHRYFHEHGFYYFHTPLITGSDAEGAG 182

Query: 179 DFLVPSRVNQG------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDE 223
           +    + ++               F+          Q +  L A+     +   P FR E
Sbjct: 183 NMFQVTTLDLDRIAKSGKVDYNADFFGKRTNLTVSGQLEGELGATSLGAIYTFGPTFRAE 242

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +  + R   EF+ ++ E++F+++D++++  E+ ++       +       FL
Sbjct: 243 NSNTPRHLAEFWMVEPEVAFIDKDELMDLEEDFIKYCVRWALDNCKDDLEFL 294



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 55/146 (37%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P      E K      NP        ++++G D+       
Sbjct: 351 HERYLVEEHFRRPVIMTDYP-----SEIKSFYMKKNP------DGKTMQGTDV------- 392

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G +R    + +L    + G+ +      +       + G  PHGG   
Sbjct: 393 --LFPRIGEIIGGSVREENYDKLLAEIDSRGMKR----EVYDWYLDTRKYGTCPHGGFGL 446

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G +N+R+V  F  +  
Sbjct: 447 GFERLILFVTGMQNIRDVIPFARTPK 472


>gi|225552442|ref|ZP_03773382.1| asparaginyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371440|gb|EEH00870.1| asparaginyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 462

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 133/379 (35%), Gaps = 51/379 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +  + A      +    +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------ 186
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKLN 185

Query: 187 -------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NAPSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR-------------------- 276
           ++ EM+F + +D +   E++L+ +     N  +   +FL                     
Sbjct: 246 IEPEMAFYKLNDNIALAEDLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFE 305

Query: 277 -ICYDDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
            I Y  AI      K +    P    ++ T+H  +     F K + V    + +      
Sbjct: 306 VITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETFKKPVVVIDYPKNFKAFYMK 365

Query: 334 GGGNRAFCDRMNEWARSQG 352
              +      M+      G
Sbjct: 366 ANKDNKTVKGMDILVPKIG 384



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 379 LVPKIGEIIGGSEREDDLQKLENRIKELNLNI----EHLNWYIDLRRFGSAPHSGFGLGL 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V    G  N+R+   FP +  
Sbjct: 435 ERLVQYSTGISNIRDSIPFPRTPK 458


>gi|195481726|ref|XP_002101754.1| GE15441 [Drosophila yakuba]
 gi|194189278|gb|EDX02862.1| GE15441 [Drosophila yakuba]
          Length = 580

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 89/560 (15%), Positives = 169/560 (30%), Gaps = 109/560 (19%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G +     + ++G VH +R  G  +IF D+R      QV+A+  S   E      ++   
Sbjct: 102 GETLENVKLSVAGRVHAIRESGAKLIFYDLRGEGVKVQVMASAKSYKSEA--DFETDTAK 159

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++             G++ +   +I++LS      LP        +  R++ R+L
Sbjct: 160 LRRGDIIGVIG--HPGKTKKGELSVMPSEIKLLSPCL-HMLPHLHFGLKDKETRYRQRYL 216

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL   + + +N   R +II+ +R  +    F+E  TP++   +        V    +   
Sbjct: 217 DLILNNKVRENFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNDLKM 276

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              +  AP+ Y ++L+  G DR ++                                   
Sbjct: 277 DLFMRIAPELYHKMLVVGGLDRVYE----------------------------------- 301

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
                    +  +F N      +       +    Y              +  +    +E
Sbjct: 302 ---------IGRQFRNEGIDLTHNPEFTTCEFYMAYA-------------DYADIMDITE 339

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
             V   + ++   Y++   P +G  G     D    + R      L            + 
Sbjct: 340 QLVSGMVKAIRGSYKITYHP-EGPEGPEQELDFTPPFKRVSMIKTL---------EEKLQ 389

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
              P A   N   T     +L  +           P               +E  +    
Sbjct: 390 VKFPAADTFNSPETNQFLSQLCAKH----QVECPAPRTTARLLDKLVGEFIEEFCV---- 441

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
                +I                   +P  M             +     +++L     E
Sbjct: 442 --NPTFI-----------------CEHPQIMSPLAKYHRS----IPGLTERFELFVAKKE 478

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRI 546
           I +     +   V  + F      K   ++           + + G+PP GG   GIDR+
Sbjct: 479 ICNAYTELNDPVVQRERFEQQASDKAAGDDEAQLVDENFCTSLEYGLPPTGGFGMGIDRL 538

Query: 547 VMLLLGAKNVREVSLFPMSQ 566
            M L  + N++EV LFP  +
Sbjct: 539 AMFLTDSNNIKEVLLFPAMK 558


>gi|326794290|ref|YP_004312110.1| Lysyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326545054|gb|ADZ90274.1| Lysyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 500

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 66/303 (21%), Positives = 126/303 (41%), Gaps = 34/303 (11%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R     DL             +    V ++G + R R      F+ ++D  G  Q   N 
Sbjct: 42  RDAYAADLQAELGQFEKAELEEKDHKVSIAGRIVRNRG----AFMLLQDMTGQIQAYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E+    ++  +  I G+               G + +  QK E+L+ +   PLP 
Sbjct: 98  KALSPELLAEQKTWDLGDIIGI------SGPVHKSGKGDLYIDMQKAELLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TAS 172
             +      +R++ R++DL  +   +     R++II+++R  +    F+E  TP+L T  
Sbjct: 151 KHKGLADMEMRYRQRYVDLIVNQESRTTFEVRSKIISTIRRFLEDRRFMEVETPMLQTIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y +  AP+ Y + L+  GF+R F+I   FR+E   +   P 
Sbjct: 211 GGATARPFVTHHNAMDMQMY-MRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAI 283
           EF  ++   ++ + +D+++  E++LR V E+      V+           F R+   ++I
Sbjct: 269 EFTMIEFYQAYADYNDLMDLTEDMLRTVSEKVLGTTNVTYQGQEFDFGAPFARMTMLESI 328

Query: 284 RRY 286
             +
Sbjct: 329 LHF 331



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 12/156 (7%)

Query: 418 NHIAQELGIINCNCFEF--CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDL 474
             +A++L I     +     W      +E   E K I       T     +  L + ND 
Sbjct: 347 TAVAKKLHIDVKPIWGLGKLWTE---IFEETAESKLIQPTF--ITEYPAEVSPLARRNDD 401

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQ 530
                 +++    G EIA+G    +  E   + F      K+  ++           A +
Sbjct: 402 NEFITDRFEFFVGGREIANGFSELNDPEDQAERFRRQVEEKDAGDDEAMHYDADYINALE 461

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+VML   + ++R+V LFP  +
Sbjct: 462 YGLPPTAGEGIGIDRLVMLFTDSPSIRDVLLFPHMK 497


>gi|90579832|ref|ZP_01235640.1| lysyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438717|gb|EAS63900.1| lysyl-tRNA synthetase [Vibrio angustum S14]
          Length = 501

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 61/287 (21%), Positives = 133/287 (46%), Gaps = 25/287 (8%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
              ++G +   R      F+ ++D  G  QV AN      ++ + +++++     G ++ 
Sbjct: 63  TTSVAGRIMAKRGP----FMVLQDVSGRIQVYANK-----QVQEELKAKYHSLDIGDIIG 113

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
              +   ++   G++ ++  + E+ + A   PLP        +  R++ R++DL  +   
Sbjct: 114 VKGQVHRSD--RGELYVNMDEYELQTKALR-PLPEKFHGLTDQEQRYRQRYVDLIINEES 170

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQA 197
           +N ++ R++++ ++R  M+   F+E  TP++   +    AR F+          Y L  A
Sbjct: 171 RNTMIMRSKVVAAIRQFMLKHQFMEVETPMMHPIAGGASARPFITHHNALDIDMY-LRIA 229

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF+R F+I   FR+E   S R   EF  ++  M++ + +D+++  E++L
Sbjct: 230 PELYLKRLVVGGFERVFEINRNFRNEGI-SPRHNPEFTMMEFYMAYADYNDLIDFTEDLL 288

Query: 258 RGVFEEFSNGN---------TVSNNFLRICYDDAIRRYGTDKPDLRN 295
             V +E                S  + R+   +AI+ Y  D   +++
Sbjct: 289 SSVAKELCGTTALPYGEHVIEFSGPYTRVTMLEAIQHYNPDNRRIQD 335



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + ++     F
Sbjct: 377 EPKLLQPTFITGYPADISPLARRSDEDPFITDRFEFFVGGREVANGFSELNDAQDQDSRF 436

Query: 509 SNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                +K+              RA + G+PP  G   GIDR+VML   +  +R+V LFP
Sbjct: 437 KAQMAAKDAGDDEAMQYDEDYIRALEFGLPPTAGQGIGIDRLVMLFTDSHTIRDVILFP 495


>gi|315022849|gb|EFT35873.1| lysyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
          Length = 565

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 61/310 (19%), Positives = 121/310 (39%), Gaps = 18/310 (5%)

Query: 6   THSCGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           TH+   +  +   GS V+++G +   R  G   F +++D  G  QV  N D  C E  K+
Sbjct: 33  THTTQSIKENFQEGSKVKIAGRLMSRRIQGKASFAELQDSEGRIQVYFNRDEICPEEDKT 92

Query: 65  VRS--EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--- 119
           + +     L   G ++    E     +  G++ +  +   +L+           +     
Sbjct: 93  LYNEVYKHLLDIGDIIGVEGELFKTQV--GEMTVMVKNFTLLTKTLRPLPQPRTDENGVV 150

Query: 120 ----YPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R++DL     + +  VKRT++ N+MR       + E  TPIL A   
Sbjct: 151 HDAFNDPELRYRQRYVDLTVNPHVKEIFVKRTKLFNAMRGFFNDAGYFEVETPILQAIPG 210

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y +  A + Y + L+  GFD  ++ +  FR+E       P E
Sbjct: 211 GASARPFITHHNALDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++ +++ + + +++  E +L       +      + F     +           D 
Sbjct: 269 FTAMEIYVAYKDYNWMMDFTERLLEHCATAVNGK--PESQFGEHTINWKAPYPRISMTDA 326

Query: 294 RNPIIMHNVT 303
                  ++T
Sbjct: 327 IRKFTGFDIT 336



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 53/143 (37%), Gaps = 25/143 (17%)

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             N  +  +I D+P               +P T      E L           +++L+  
Sbjct: 373 EGNFIQPTFITDYP------------IEMSPLTKKHRSKEGL---------TERFELMVC 411

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGI 543
           G EIA+     +      + F       E  ++          RA + GMPP  G+  G+
Sbjct: 412 GKEIANAYSELNDPIDQRERFEEQLKLSEKGDDEAMFIDQDFLRALEYGMPPTAGLGIGM 471

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR+VM L    +++EV  FP  +
Sbjct: 472 DRLVMFLTNNASIQEVLFFPQMR 494


>gi|119470316|ref|ZP_01613075.1| asparaginyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119446488|gb|EAW27763.1| asparaginyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 465

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 68/387 (17%), Positives = 126/387 (32%), Gaps = 55/387 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCI 73
           V S V + GW+   R    GI FL + D       Q V       ++   S+ +   + +
Sbjct: 16  VDSQVTIKGWIRTRRDSKAGISFLAVHDGSCFDPIQAVVPNSLNNYDEVTSLTAGCSVSV 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+++  + +  +        E+ A  + +L   E         + +      ++  L  
Sbjct: 76  TGVLVQSAGKGQS-------FEIQANTVTVLGWVENPDSYPMSAKRHSIEYLREHAHLRP 128

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ----- 188
           R + +      R  +  ++      + +   STPI+TAS  EGA +    S ++      
Sbjct: 129 RTNMIGAVTRVRNCLAQAIHRFYHEQGYYWISTPIITASDCEGAGEMFRVSTLDMQNLPR 188

Query: 189 ---------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+   A      Q      AS   + +   P FR E+  + R   EF+ 
Sbjct: 189 TDKGDVDYSEDFFGKEAFLTVSGQLNGETYASAMSKIYTFGPTFRAENSNTSRHLAEFWM 248

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFL 275
           ++ E++F + +DI    EN+L+ VF+                            V  +F 
Sbjct: 249 VEPEVAFADLEDIAKLAENMLKYVFKAVLEERRDDMEFFAQRIEKTAISRLEEFVEKDFA 308

Query: 276 RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           ++ Y DA+             +       +EH  +     F   + +             
Sbjct: 309 QVDYTDAVEILKNCGKKFEFDVEWGVDLQSEHERYLAEEHFKAPVVIKNYPRDI-----K 363

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIF 360
               R   D     A     PG+  I 
Sbjct: 364 AFYMRQNEDGKTVAAMDVVAPGIGEII 390



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 75/226 (33%), Gaps = 24/226 (10%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FW ++     A +  +AK    +     +  L+ +  D  FF         S   +    
Sbjct: 246 FWMVEPEVAFADLEDIAKLAENMLKYVFKAVLEERRDDMEFFAQRIEKTAISRLEEFVEK 305

Query: 420 IAQELGIINC--------NCFEFC--WIMDFPFYEWNEEEKKIDFAHN-----PFTMPQG 464
              ++   +           FEF   W +D      +E E+ +   H          P+ 
Sbjct: 306 DFAQVDYTDAVEILKNCGKKFEFDVEWGVDL----QSEHERYLAEEHFKAPVVIKNYPRD 361

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                   +         D+V  G  EI  G  R    +V+      +G++K      + 
Sbjct: 362 IKAFYMRQNEDGKTVAAMDVVAPGIGEIIGGSQREERLDVLDARLEEMGLNK----EDYS 417

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                 + G  PH G   G +R+V  + G  NVR+V  FP ++   
Sbjct: 418 WYRDLRKYGSVPHSGFGLGFERLVAYVTGMGNVRDVIAFPRTKGSA 463


>gi|229190299|ref|ZP_04317300.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228593083|gb|EEK50901.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 432

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 70/279 (25%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 5   MKRSLTKEC----TKQNGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G ++  S   +        +E+ A ++ +++ AE LP  +  ++  
Sbjct: 60  ---KVDVESVVHVIGEIVETSKTEL-------GVEVLAHEVNVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     S+  
Sbjct: 297 GDLDTEGEKLLGKYVKEIYNSEFVFITHYP-----------KEARPMYTMPNKENPSITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 426


>gi|225549289|ref|ZP_03770262.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370147|gb|EEG99587.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 462

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 133/379 (35%), Gaps = 51/379 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +  + A      +    +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------ 186
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKLN 185

Query: 187 -------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NTLSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR-------------------- 276
           ++ EM+F + +D +   E++L+ +     N  +   +FL                     
Sbjct: 246 IEPEMAFYKLNDNIALAEDLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFE 305

Query: 277 -ICYDDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
            I Y  AI      K +    P    ++ T+H  +     F K + V    + +      
Sbjct: 306 IITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETFKKPVVVIDYPKNFKAFYMK 365

Query: 334 GGGNRAFCDRMNEWARSQG 352
              +      M+      G
Sbjct: 366 ANKDNKTVKGMDILVPKIG 384



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 379 LVPKIGEIIGGSEREDDLQKLENRIKELNLNI----EHLNWYLDLRRFGSAPHSGFGLGL 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V    G  N+R+   FP +  
Sbjct: 435 ERLVQYSTGISNIRDSIPFPRTPK 458


>gi|323144601|ref|ZP_08079189.1| asparagine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322415610|gb|EFY06356.1| asparagine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 466

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 124/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VGS V L+GW+   R    G  FL + D      V    D +       + S       G
Sbjct: 16  VGSTVTLAGWLRTRRDSKAGFSFLAVNDGSCFNNVQVIADKSLNNYESEILS----LTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             ++       +       E+ A  I++    E+        + +      +Y  L  R 
Sbjct: 72  CSLAVEGTLEASQGKGQAFEIKATAIKVYGFVEDPDTYPMSAKRHSIEYLREYAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           + +   +  R     ++        F+  STP++TAS  EGA +    + ++        
Sbjct: 132 NLIGAVMRIRNTAAYAIHSFFQERGFMWVSTPLITASDCEGAGEMFTVTNLDLNNIPKDD 191

Query: 190 --------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      AS F + +   P FR ED  + R   EF+  +
Sbjct: 192 KGQVDYSKDFFGRHAYLTVSGQLNVETYASAFSKCYTFGPTFRAEDSNTTRHLAEFWMCE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            EM+F + +      E++L+ VF                             ++ +F ++
Sbjct: 252 PEMAFTDLNGCAAVAEDMLKYVFRTVLELRRDDMEFIVERVDKDAIGRLERFINADFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI+   T       P+   +   +EH  +     F   + V    +          
Sbjct: 312 DYTDAIKILETCGKKFEFPVKWGIDLQSEHERYLAEEHFKSPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRMNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 6/100 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    E++ +    +G++K              +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEMLDKRIEEMGLNKNAYW----WYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G  PH G   G +R+++ + G  NVR+V  FP +    D
Sbjct: 426 YGSVPHSGFGLGFERLIVYITGVGNVRDVIPFPRTPRNAD 465


>gi|260911445|ref|ZP_05918035.1| lysine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634444|gb|EEX52544.1| lysine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 576

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 61/332 (18%), Positives = 129/332 (38%), Gaps = 20/332 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             D    V ++G +   R  G   F++++D  G  QV    D  C +  K + +     +
Sbjct: 47  KDDEQRQVCIAGRMMTRRVMGKASFMELQDSKGRIQVYITRDDICPDENKELYNTVFKRL 106

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFK 127
             +      +       TG+I + A+++ +LS + +    V  +      +     +RF+
Sbjct: 107 LDIGDFVGVKGFVFRTQTGEISVHAKELTLLSKSIKPLPIVKYKDGVAYDKFDDPELRFR 166

Query: 128 YRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSR 185
            R++DL  +  + +  +KR ++I++MR       + E  TP L + +    AR F+    
Sbjct: 167 QRYVDLVVNEGIKETFLKRAKVISTMRQFFDEAGYTEVETPTLQSIAGGATARPFITHFN 226

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 + L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + +
Sbjct: 227 ALNQEMF-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTLMELYVQYKD 284

Query: 246 QDDILNTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRRYGTDKPDLRNP 296
            + +++  E +L  +    +                 + R+   DAI+       D +  
Sbjct: 285 YNWMMSFTERLLETICVAVNGKPESVVDGQVISFKAPYRRLPILDAIKEKTGYDLDGKTE 344

Query: 297 IIMHNV-TEHFVHSEFRVFSKILSVNPGYEVW 327
             +  V  E  +  +  +    L      E  
Sbjct: 345 DEIRQVCKELKLDIDETMGKGKLIDEIFGEFC 376



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E +          P       K +        +++L+ NG E+A+     +      + F
Sbjct: 377 EGQFIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERF 436

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  +  ++          R+ Q GMPP  GI  GIDR+VML+ G   ++EV LFP 
Sbjct: 437 VEQMKLADKGDDEAMIIDKDFLRSLQYGMPPTSGIGIGIDRLVMLMTGQTAIQEVLLFPQ 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|254172086|ref|ZP_04878762.1| asparaginyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033982|gb|EEB74808.1| asparaginyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 430

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 70/309 (22%), Positives = 131/309 (42%), Gaps = 31/309 (10%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSV 65
            C D+     G  V+L+GWV+R R  G  +F+ +RD  GI QVV + +     +  AK +
Sbjct: 6   YCADVKPEMEGKRVKLAGWVYRKREVGKKVFIVLRDSSGIVQVVFSKELNEEAYREAKKL 65

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + I+G V +           TG  E+ A K+E+L   +  P+     ++      
Sbjct: 66  GIESSVIIEGTVKADP------RAPTGA-EVRADKLEVLQNVDFFPIT----KDASPEFL 114

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR   +   +  +  ++ + R  ++ + + E   PIL   + EG         
Sbjct: 115 LDVRHLHLRSPKVASIMKVKATLVQAAREWLLQDGWYEVFPPILVTGAVEGGSTLFKLKY 174

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++  +  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E ++++
Sbjct: 175 FDR--YAYLSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD 231

Query: 246 QDDILNTMENVLRGVF---------------EEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
             DI+   E ++  +                ++ +        F RI YD+AI    +  
Sbjct: 232 LWDIMKVEEELVSYMVQRALELRKSEIETFRKDLTTLKNAVPPFPRISYDEAIEVLQSKG 291

Query: 291 PDLRNPIIM 299
            ++     M
Sbjct: 292 VEIEWGEDM 300



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 21/156 (13%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
                  +++G          +  + PF+ +             F M +         D 
Sbjct: 291 GVEIEWGEDMGADEERVLTEEF--EAPFFVY-----GYPKGIKAFYMKED------PEDP 337

Query: 475 LSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
             + A   D++      EI  G  R    + ++Q     G++ E  +          + G
Sbjct: 338 RKVLAA--DMLAPEGYGEIIGGSQREDDYDKLVQRILEEGMNPEDYQ----WYLDLRKYG 391

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             PH G   G++R+V  +L   ++R  +LFP + + 
Sbjct: 392 SVPHSGFGLGLERLVAWVLKLDHIRWATLFPRTPSR 427


>gi|216264242|ref|ZP_03436234.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980715|gb|EEC21522.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 462

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 133/379 (35%), Gaps = 51/379 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +  + A      +    +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPEIYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------ 186
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKLN 185

Query: 187 -------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NAPSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR-------------------- 276
           ++ EM+F + +D +   E++L+ +     N  +   +FL                     
Sbjct: 246 IEPEMAFYKLNDNIALAEDLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFE 305

Query: 277 -ICYDDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
            I Y  AI      K +    P    ++ T+H  +     F K + V    + +      
Sbjct: 306 VITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETFKKPVVVIDYPKNFKAFYMK 365

Query: 334 GGGNRAFCDRMNEWARSQG 352
              +      M+      G
Sbjct: 366 ANKDNKTVKGMDILVPKIG 384



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 379 LVPKIGEIIGGSEREDDLQKLENRIKELNLNI----EHLNWYLDLRRFGSAPHSGFGLGL 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V    G  N+R+   FP +  
Sbjct: 435 ERLVQYSTGISNIRDSIPFPRTPK 458


>gi|225549689|ref|ZP_03770654.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|225369649|gb|EEG99097.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 462

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 133/379 (35%), Gaps = 51/379 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +  + A      +    +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPEIYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------ 186
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKLN 185

Query: 187 -------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR-------------------- 276
           ++ EM+F + +D +   E++L+ +     N  +   +FL                     
Sbjct: 246 IEPEMAFYKLNDNIALAEDLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFE 305

Query: 277 -ICYDDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
            I Y  AI      K +    P    ++ T+H  +     F K + V    + +      
Sbjct: 306 VITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETFKKPVVVIDYPKNFKAFYMK 365

Query: 334 GGGNRAFCDRMNEWARSQG 352
              +      M+      G
Sbjct: 366 ANKDNKTVKGMDILVPKIG 384



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 379 LVPKIGEIIGGSEREDDLQKLENRIKELNLNI----EHLNWYLDLRRFGSAPHSGFGLGL 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V    G  N+R+   FP +  
Sbjct: 435 ERLVQYSTGISNIRDSIPFPRTPK 458


>gi|15594447|ref|NP_212235.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|3915060|sp|O51128|SYN_BORBU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|2687998|gb|AAC66501.1| asparaginyl-tRNA synthetase (asnS) [Borrelia burgdorferi B31]
          Length = 466

 Score =  186 bits (473), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 133/379 (35%), Gaps = 51/379 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +  + A      +    +  K + +   + 
Sbjct: 18  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 77

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 78  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------ 186
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 130 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKLN 189

Query: 187 -------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 190 NALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 249

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR-------------------- 276
           ++ EM+F + +D +   E++L+ +     N  +   +FL                     
Sbjct: 250 IEPEMAFYKLNDNIALAEDLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFE 309

Query: 277 -ICYDDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
            I Y  AI      K +    P    ++ T+H  +     F K + V    + +      
Sbjct: 310 VITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETFKKPVVVIDYPKNFKAFYMK 369

Query: 334 GGGNRAFCDRMNEWARSQG 352
              +      M+      G
Sbjct: 370 ANKDNKTVKGMDILVPKIG 388



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 383 LVPKIGEIIGGSEREDDLQKLENRIKELNLNI----EHLNWYLDLRRFGSAPHSGFGLGL 438

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V    G  N+R+   FP +  
Sbjct: 439 ERLVQYSTGISNIRDSIPFPRTPK 462


>gi|282880920|ref|ZP_06289611.1| lysine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281305143|gb|EFA97212.1| lysine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 578

 Score =  186 bits (473), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 53/273 (19%), Positives = 111/273 (40%), Gaps = 10/273 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T        S+    V ++G +   R  G   F++++D  G  QV    D  C + 
Sbjct: 36  NAFSTDIKEQYQESEEKREVVIAGRMMTRRIMGKASFMELQDSKGRIQVYITRDDICPDD 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  +      +       TG+I + AQ + +LS A +    V  +    
Sbjct: 96  NKDLYNVVFKRLMDIGDFVGIKGFVFKTQTGEISVHAQSLTLLSKALKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                   +R++ R++DL  +  +    ++R  ++ +MR  +    + E  TP L + + 
Sbjct: 156 YDKFEDPELRYRQRYVDLVVNDGVKNTFLQRATVLRTMRKVLDDAGYTEVETPTLQSIAG 215

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F           Y +  A + Y + L+  GF+  ++I   FR+E    +  P E
Sbjct: 216 GASARPFTTHFNALNIDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRNHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           F  +++ + + + + ++   E +L  V    + 
Sbjct: 274 FTCMELYVQYKDYNWMMEFTEKLLETVCIAVNG 306


>gi|30020303|ref|NP_831934.1| aspartyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229043956|ref|ZP_04191649.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229127613|ref|ZP_04256602.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|296502783|ref|YP_003664483.1| aspartyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|29895854|gb|AAP09135.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228655690|gb|EEL11539.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228725367|gb|EEL76631.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH676]
 gi|296323835|gb|ADH06763.1| aspartyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 432

 Score =  186 bits (473), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 5   MKRSLTKEC----TKKSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G       ET+  +     +E+ A ++++++ AE LP  +  ++  
Sbjct: 60  ---KVDVESVVHVIG-------ETVETSKTELGVEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TM      ++  
Sbjct: 297 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTMQNKENPAITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+       +F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYELLLASFKEKGLHP----EKFQSYLNTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|313205755|ref|YP_004044932.1| lysyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445071|gb|ADQ81426.1| lysyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|325336803|gb|ADZ13077.1| Lysyl-tRNA synthetase (class II) [Riemerella anatipestifer RA-GD]
          Length = 566

 Score =  186 bits (472), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 61/310 (19%), Positives = 121/310 (39%), Gaps = 18/310 (5%)

Query: 6   THSCGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           TH+   +  +   GS V+++G +   R  G   F +++D  G  QV  N D  C E  K+
Sbjct: 34  THTTQSIKENFQEGSKVKIAGRLMSRRIQGKASFAELQDSEGRIQVYFNRDEICPEEDKT 93

Query: 65  VRS--EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--- 119
           + +     L   G ++    E     +  G++ +  +   +L+           +     
Sbjct: 94  LYNEVYKHLLDIGDIIGVEGELFKTQV--GEMTVMVKNFTLLTKTLRPLPQPRTDENGVV 151

Query: 120 ----YPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R++DL     + +  VKRT++ N+MR       + E  TPIL A   
Sbjct: 152 HDAFNDPELRYRQRYVDLTVNPHVKEIFVKRTKLFNAMRGFFNDAGYFEVETPILQAIPG 211

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y +  A + Y + L+  GFD  ++ +  FR+E       P E
Sbjct: 212 GASARPFITHHNALDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-E 269

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++ +++ + + +++  E +L       +      + F     +           D 
Sbjct: 270 FTAMEIYVAYKDYNWMMDFTERLLEHCATAVNGK--PESQFGEHTINWKAPYPRISMTDA 327

Query: 294 RNPIIMHNVT 303
                  ++T
Sbjct: 328 IRKFTGFDIT 337



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 53/143 (37%), Gaps = 25/143 (17%)

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             N  +  +I D+P               +P T      E L           +++L+  
Sbjct: 374 EGNFIQPTFITDYP------------IEMSPLTKKHRSKEGL---------TERFELMVC 412

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGI 543
           G EIA+     +      + F       E  ++          RA + GMPP  G+  G+
Sbjct: 413 GKEIANAYSELNDPIDQRERFEEQLKLSEKGDDEAMFIDQDFLRALEYGMPPTAGLGIGM 472

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR+VM L    +++EV  FP  +
Sbjct: 473 DRLVMFLTNNASIQEVLFFPQMR 495


>gi|298242602|ref|ZP_06966409.1| lysyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297555656|gb|EFH89520.1| lysyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 504

 Score =  186 bits (472), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 64/299 (21%), Positives = 118/299 (39%), Gaps = 26/299 (8%)

Query: 5   RTHSCGDLGV---SDVGSF--VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           RTH+  ++        G      + G V  +R  G   F  I D  G  QV    +    
Sbjct: 37  RTHTIENVLTHFDEYAGPEGDFAIVGRVRLLREMGKAAFAKIEDGTGALQVYFRINDLGE 96

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E  + ++   +           A        TG+  L  +   ++    + PLP      
Sbjct: 97  ESYRVLKLLDLGD------FIEARGFLFVTRTGERTLHVKGWRVIGKGLQ-PLPEKYHGL 149

Query: 120 YPESIRFKYRFLDLRRD--TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG- 176
             + +R + R+LDL  +   +      R+R+I++MR  +  + ++E  TPIL        
Sbjct: 150 EDKELRQRKRYLDLIANGEEVKTVFETRSRVISAMRRFLEGQGYLEFETPILQPLYGGAT 209

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + Y + L+  GF+R ++I   FR+E       P EF  
Sbjct: 210 ARPFITHHNTLDRDLY-LRIAIELYLKRLIVGGFERVYEIGRNFRNEGIDRSHNP-EFTM 267

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           ++   ++ + +D++  +E ++  + +E      V+           + RI   +AI +Y
Sbjct: 268 MECYQAYADYNDMMKLVEEMIAYIAQEVKGTTRVTYQGTEIDLTPPWPRIPLLEAIHKY 326



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 5/104 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
           S    ++     G E  +     +        F +    K   +            A + 
Sbjct: 400 SGLVERFQPFIGGLETGNSFTELNDPLDQRARFEDQMKQKSQGDEEAQVLDEDFLEALEI 459

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN-FCDLLMG 574
           GMPP GG+  G+DR+ M +   +++R+V LFP  +    + ++ 
Sbjct: 460 GMPPTGGVGIGVDRLAMFMADQESIRDVILFPTMRKTAEEQMVE 503


>gi|229144809|ref|ZP_04273206.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228638531|gb|EEK94964.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
          Length = 432

 Score =  186 bits (472), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 5   MKRSLTKEC----TKKSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G       ET+  +     +E+ A ++++++ AE LP  +  ++  
Sbjct: 60  ---KVDVESVVHVIG-------ETVETSKTELGVEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TM      ++  
Sbjct: 297 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTMQNKENPAITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+       +F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYELLLASFKEKGLHP----EKFQSYLNTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|150021256|ref|YP_001306610.1| lysyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|166230598|sp|A6LMS4|SYK_THEM4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|149793777|gb|ABR31225.1| lysyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 502

 Score =  186 bits (472), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 66/329 (20%), Positives = 130/329 (39%), Gaps = 29/329 (8%)

Query: 5   RTHSCGDLGVSDVG---------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           +TH+   +     G          FV  +G +  +R HG   F  I+D YG  Q     D
Sbjct: 30  KTHTSEMIKKEFEGLNPGEVKDDVFVSTAGRIMSLRKHGKSAFFHIKDFYGRIQAYIRKD 89

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E  +  +    +   G ++        +   TG+I +  ++I++L+     P+P  
Sbjct: 90  VVGEEAYEFFKEHIAI---GDIVGVKGNVFKSK--TGEITILIKEIKLLNKPLR-PMPEK 143

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASS 173
                 + + ++ R++D+   D        R  +I  +R  + ++ FIE  TPIL   + 
Sbjct: 144 WHGIKDKEVLYRQRYVDMIANDDTLNRFKVRFEVIKLIRDFLNSKGFIEVETPILEYVTG 203

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+    V     Y +  A + Y +  +  GF++ +++   FR+E       P E
Sbjct: 204 GASARPFVTHLNVFDIEMY-MRIATELYLKRFIVGGFEKVYELGKNFRNEGLSYKHHP-E 261

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR--------- 284
           F  +++  ++ + +D++N  E +   + E+      +    + + +    R         
Sbjct: 262 FTSIEIYQAYADYEDMMNLTEELFVYIVEKLFGTTKIKYQNVELDFSRPWRRIKMRDFIK 321

Query: 285 -RYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
              G D  +     +M  + EH V  E R
Sbjct: 322 EHLGVDILEDSMGRMMDVLEEHGVEVEIR 350



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 6/96 (6%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYR 527
            D       +++L+  G E+A+     +      + F      +E  +           R
Sbjct: 389 EDPR--VTERFELIIYGREMANAFSELNDPVDQYERFLKQVELREAGDEEAQMMDRDFVR 446

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDR+VMLL  +  +R+V  FP
Sbjct: 447 ALEYGMPPTGGLGIGIDRLVMLLTNSATIRDVIAFP 482


>gi|316976293|gb|EFV59613.1| lysyl-tRNA synthetase [Trichinella spiralis]
          Length = 531

 Score =  186 bits (472), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 58/276 (21%), Positives = 123/276 (44%), Gaps = 13/276 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           + +Y +  C ++    +   VR++G +H  R  G  +IF D+R      Q++AN      
Sbjct: 98  IEKYNSVKCEEV----LNETVRVAGRIHSKREAGQKLIFYDLRAEGTRLQIMANGKFYKT 153

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +R    +    +V         +    G++ +   ++ +L+      LP      
Sbjct: 154 GEAEFLRINEAVRRGDIV---GCIGHPSRTKKGELSIIPTELVLLTPCL-HMLPHLHYGL 209

Query: 120 YPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGA 177
             +  R++ R+LDL   + +    ++R++I+N +R  + +  F+E  TP++        A
Sbjct: 210 KNQETRYRMRYLDLIINNNVRNIFIRRSQILNYIRKYLDSIGFLEVETPMMNMIPGGATA 269

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F+          Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   
Sbjct: 270 KPFVTHHNELDRDLY-MRVAPELYLKMLIVGGIDRVYEIGRNFRNEGIDLTHNP-EFTMC 327

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +  M++ + +D++   E++L G+ +       V+ +
Sbjct: 328 EFYMAYADYNDLMKITEDLLSGMVKHLFGSYLVTYH 363



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 4/95 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQC 531
                +++L     E+ +     +   V  + F     +K   +            A + 
Sbjct: 425 PGLTERFELFVMTRELCNAYTELNDPVVQRERFEEQAANKAAGDEEAQPIDEVFCNALEH 484

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP  G   GIDR+ MLL    N++EV LFP  +
Sbjct: 485 GLPPTAGWGMGIDRLTMLLTDQNNIKEVLLFPAMK 519


>gi|154493632|ref|ZP_02032952.1| hypothetical protein PARMER_02972 [Parabacteroides merdae ATCC
           43184]
 gi|154086842|gb|EDN85887.1| hypothetical protein PARMER_02972 [Parabacteroides merdae ATCC
           43184]
          Length = 576

 Score =  186 bits (472), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 108/256 (42%), Gaps = 10/256 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV  + D  C E  K + +     +  +    
Sbjct: 55  VSIAGRIMSRRIMGKASFMELQDSEGRIQVYISRDDICPEENKDLYNIVFKKLLDIGDFV 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFLDLR 134
             +        G+I + AQ+I +LS + +    V  +            +R++ R++DL 
Sbjct: 115 GIKGFVFRTQMGEISVHAQEITVLSKSLKPLPVVKYKDGVAYDGFNDPELRYRQRYVDLV 174

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +  +    +KR  +I +MR  +    + E  TPIL +      AR F+          Y
Sbjct: 175 VNDGVKDIFMKRAAVIKTMRTALDEAGYTEVETPILQSIPGGASARPFITHHNSLDIDLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + +++ 
Sbjct: 235 -LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMELYVQYKDYNWMMSF 292

Query: 253 MENVLRGVFEEFSNGN 268
            E +L  +    +   
Sbjct: 293 TEQLLERICIAVNGTC 308



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 72/198 (36%), Gaps = 42/198 (21%)

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG---IINCNCFEFC----- 435
            +AI+ +      D       +    C         I + +G   +I+    EFC     
Sbjct: 329 LDAIKEKTGY---DLNGKSEDEIRTICKDLN---LEIDETMGKGKLIDEIFGEFCEGTFI 382

Query: 436 ---WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              +I+D+P               +P T        L           +++L+ NG E+A
Sbjct: 383 QPTFIIDYP------------VEMSPLTKMHRSKPGL---------TERFELMINGKEVA 421

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVM 548
           +     +      + F       E  ++          RA Q GMPP  GI  GIDR+VM
Sbjct: 422 NAYSELNDPIDQEERFKEQLRLSEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLVM 481

Query: 549 LLLGAKNVREVSLFPMSQ 566
           L+ G   ++EV LFP  +
Sbjct: 482 LMTGQTTIQEVLLFPQMR 499


>gi|260890988|ref|ZP_05902251.1| lysine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260859015|gb|EEX73515.1| lysine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 494

 Score =  186 bits (472), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 59/280 (21%), Positives = 107/280 (38%), Gaps = 13/280 (4%)

Query: 9   CGDLGVSDV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
             ++   D       + +G +   R  G   F  I+D  G  Q     D    E  +  +
Sbjct: 40  IAEINQYDETCDKVFKTAGRIVAFRRMGKNGFGQIQDPTGKIQYYVKKDEVGEEQYEIYK 99

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +    GL      E       TG++ L     E+LS     PLP           R+
Sbjct: 100 KMGLGDFIGL------EGKLFRTNTGELTLRVDSFEVLSK-NVRPLPEKFHGLTNIETRY 152

Query: 127 KYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R++DL     +   + KR +II   R  +  + F E  TP++   +    AR F+   
Sbjct: 153 RQRYVDLVMNREVMDTMKKRFQIIRFFRSYLEKQGFTEVETPMMHPVAGGATARPFVTHH 212

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  + L  AP+ Y + L+  GF++ F+I   FR+E       P EF  +++  ++ 
Sbjct: 213 NALDMELF-LRIAPELYLKRLLVGGFEKVFEINRSFRNEGISIKHNP-EFTMMELYQAYA 270

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           + +D+++  E+++  +  E      +      I      R
Sbjct: 271 DFNDMMDLTEDLISSLTFELHGKYEIEYEDKTINMAKPWR 310



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPP 535
            +++L  +G E A+     +      + F      KE  ++   G      RA + GMPP
Sbjct: 398 DRFELFISGREFANAYSELNDPRDQKERFEEQVKLKEAGDDEAQGMDLDYIRALEYGMPP 457

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG+  GIDR+VML   + ++R+V LFP
Sbjct: 458 AGGLGIGIDRLVMLQTNSASIRDVILFP 485


>gi|308048395|ref|YP_003911961.1| lysyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307630585|gb|ADN74887.1| lysyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 493

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 78/338 (23%), Positives = 138/338 (40%), Gaps = 36/338 (10%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + V ++G +   R      FL I+D  G  Q  A+ +    +  KS+    +  I G+  
Sbjct: 61  TTVSIAGRIMAKRGP----FLAIQDVSGRIQSYASKEVQ--QELKSIGGLDIGDIIGV-- 112

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               +        G + +   + ++L+ A   PLP        +  R++ R++DL  +  
Sbjct: 113 ----KGQLHKSGKGDLYVDMAEYQLLTKALR-PLPEKFHGLTDQEQRYRQRYVDLIVNEE 167

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
            +N  K R+++I ++R  M   +F+E  TP++        AR F+          Y L  
Sbjct: 168 SRNTFKVRSKVIAAIRQYMTDRDFMEVETPMMQVIPGGASARPFITHHNALDQDMY-LRI 226

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  D+++  E++
Sbjct: 227 APELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYRDLMDLTEDM 285

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           LR V E+                  A  +YG ++ D   P    ++ E  +     V  +
Sbjct: 286 LRTVTEQVLG--------------SAKVKYGEEEFDFGAPFARMSMREAILKYNPEVTLE 331

Query: 317 ILSVNPGYEVWAI-----PAKGGGGNRAFCDRMNEWAR 349
           +LS        A        K  G  R   +   E A 
Sbjct: 332 MLSTFESACEVAKDLKIEVEKSWGLGRVITEIFEETAE 369



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 6/152 (3%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A++L I     +    ++    +E    E ++         P       + ND     
Sbjct: 341 EVAKDLKIEVEKSWGLGRVI-TEIFE-ETAEHRLIQPTFITEYPAEVSPLARRNDDNPEI 398

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++    G EIA+G    + +E   Q F +   +KE  ++      G    A + G+P
Sbjct: 399 TDRFEFFVGGREIANGFSELNDAEDQKQRFLDQVKAKESGDDEAMFFDGDYVTALEHGLP 458

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P  G   GIDR+VML   +  +R+V LFP  +
Sbjct: 459 PTAGQGIGIDRLVMLFTDSHTIRDVILFPAMR 490


>gi|295111294|emb|CBL28044.1| Lysyl-tRNA synthetase (class II) [Synergistetes bacterium SGP1]
          Length = 511

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 61/287 (21%), Positives = 112/287 (39%), Gaps = 20/287 (6%)

Query: 12  LGVSDVGSFVRL--SGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           L   +    V L  +G +  +R  G   F D+ D  G  Q+    ++   +  + ++   
Sbjct: 63  LAPEESDETVTLSTAGRLMTLRRQGRTTFADLADETGRIQLYFQVNALGEKPYEFLKKW- 121

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
                G  +             G++ +     ++LS +   PLP           R++ R
Sbjct: 122 --VDTGDWLGVVG--HPCRTKRGELTIQVTDYKLLSKSIR-PLPEKWHGLTDTETRYRRR 176

Query: 130 FLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVN 187
           ++DL     + +   KR++II+S R  + A   +E  TPIL+  +    AR F       
Sbjct: 177 YMDLIANPEVREVFRKRSKIISSFRETLEAHGSLEVETPILSVLAGGANARPFKTFHNAL 236

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A + Y + L+     R ++I   FR+E   +   P EF  +++   +   +
Sbjct: 237 GLDMY-LRIAVELYLKRLVVGMMGRVYEIGRNFRNEGIDTMHNP-EFTMMEVYWPYANYE 294

Query: 248 DILNTMENVLRGVFEEFSNGNTV--------SNNFLRICYDDAIRRY 286
           D++N  E ++R   +                S  F RI   DA++ Y
Sbjct: 295 DMMNLAEELIRNAAKAIGTLEIEWNGVKADLSRPFRRITMLDAVKEY 341



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 9/131 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLL-SIKAFQYDLVCNGFEIASGGIRNH 499
            YE   EEK +      F M     +  L   D        +++L   G E+A+     +
Sbjct: 381 LYEAFCEEKMVQPT---FVMGHPTEISPLSKRDPENPDYTHRFELFMFGKEVANAFSELN 437

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                   F +    KE  ++           A + G+PP GG+  G+DR+VM L GA++
Sbjct: 438 DPLDQRARFEDQMRKKEAGDDEAHAFDEDFINAIEVGLPPTGGMGIGMDRLVMFLTGARS 497

Query: 556 VREVSLFPMSQ 566
           +R+V LFP  +
Sbjct: 498 IRDVILFPAMK 508


>gi|329948250|ref|ZP_08295094.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328522774|gb|EGF49882.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 556

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 98/585 (16%), Positives = 182/585 (31%), Gaps = 142/585 (24%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID- 74
           +    V ++G V  +R  G + F+ ++D  G T        A      +  + +   +D 
Sbjct: 82  ETDDVVGVAGRVVFLRNTGRLCFVTLQDGAGATLQAMLSAKALPAEGHTALAAFKADVDL 141

Query: 75  GLVMSRSAETINANIITGQIELSAQ--------------------KIEILSVAEELPLPV 114
           G  +      I++    G++ + A+                       I S A       
Sbjct: 142 GDHLFVHGRVISSR--RGELSVMAEPVLREGAEAASAGDDDVEVPAWRIASKALRPLPKT 199

Query: 115 FGER-----EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPI 168
           +           E  R + R LDL      +++V+ R  ++ S+R      +++E  TP+
Sbjct: 200 WTNEAGEAVTLSEEQRVRRRELDLLTRPAARDMVRTRAAVVRSIRENFFRRDYLELETPM 259

Query: 169 LTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L        AR F+          Y L  A + Y +  +  G DR F+I   FR+E   S
Sbjct: 260 LQVVHGGAAARPFITHMNAFDMDLY-LRIATEIYLKRAVVGGVDRVFEINRNFRNEGADS 318

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
              P EF  L+   ++ + D     M  + R + ++ +                      
Sbjct: 319 SHSP-EFTALEAYEAYSDYDG----MAELTRNLVQQAARD-------------------A 354

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
            D P+    + + + TE+ +  ++                              D     
Sbjct: 355 FDLPEGGEVVTLSDGTEYDLSGQWD---------------------------TIDLYTSV 387

Query: 348 ARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPL 407
           + + G+                     +          A   R+ ++  D          
Sbjct: 388 SEALGEE--------------------ITVETPREQLVAHAERIGLEVDDYAV------- 420

Query: 408 KFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
                A      I +EL  +    +   ++ DFP     E+   +   H           
Sbjct: 421 -----AGKVVEDIFEEL--VGNKLWAPTFVYDFP-----EDTSPLTRYHR---------- 458

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----G 523
                        ++DL   GFE A+         V  + F    ++    +        
Sbjct: 459 ------SKPGLTEKWDLYVRGFETATAYSELADPVVQRERFEAQALAAAKGDPEAMVLDE 512

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
               A + G PP GG+  GIDR++M+L G   +RE   FP+ +  
Sbjct: 513 DFLVAMEQGFPPSGGMGMGIDRLLMVLTGQG-IRETITFPLVKRG 556


>gi|192359674|ref|YP_001982939.1| lysyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190685839|gb|ACE83517.1| lysyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 532

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 63/287 (21%), Positives = 126/287 (43%), Gaps = 25/287 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G +   R      F+ ++D  G  Q+ A  D A  E+ K     W L  
Sbjct: 95  LEALDHKVSVAGRLMAKRGP----FMVLQDGDGTIQLYA--DKAAQEVIKENWGVWDL-- 146

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++  +     +    G + ++ ++ ++L+ +   PLP        + IR++ R++DL
Sbjct: 147 -GDIVGVTGALHKSG--KGDLYVNLEQFQLLTKSLR-PLPDKYHGLSDQEIRYRQRYVDL 202

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   ++  + R++ I+ +R  M    F+E  TP+L        AR F+          
Sbjct: 203 IVNPEVRDTFRLRSQCISFIRNYMSGRGFMEVETPMLHVIPGGASARPFVTHHNALDMDM 262

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   ++ +  D+++
Sbjct: 263 F-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMMEFYQAYADYKDLMD 320

Query: 252 TMENVLRGVFEEFSN---------GNTVSNNFLRICYDDAIRRYGTD 289
             E++LR +  + +                 F+R+   D+I  Y  D
Sbjct: 321 LTEDLLRKLCIDVTGGTTLKYQDSEYDFGKPFVRLSVFDSILHYNPD 367



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+D        P       + +D       +++    G E+A+G    + +E   + F
Sbjct: 409 EHKLDQPTFITEYPTEVSPLARRSDTNPAVTDRFEFFIGGRELANGFSELNDAEDQAERF 468

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K+  ++          RA + G+PP  G   GIDR++ML   A ++R+V LFP 
Sbjct: 469 LEQVKAKDAGDDEAMYYDADFVRALEYGLPPTAGEGIGIDRLIMLFANAPSIRDVLLFPH 528

Query: 565 SQ 566
            +
Sbjct: 529 MR 530


>gi|150397998|ref|YP_001328465.1| lysyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166230590|sp|A6UDA0|SYK_SINMW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|150029513|gb|ABR61630.1| lysyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 498

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 63/296 (21%), Positives = 125/296 (42%), Gaps = 26/296 (8%)

Query: 2   HRYRTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +L          ++    V ++G V+  R  G  +F+DI D  G  QV ++
Sbjct: 36  HFHRTMTNAELAEKYQDLAPDTETQDLVTVAGRVYSSRNSG--MFMDIHDASGKIQVFSH 93

Query: 54  PDSACFE---IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
            D+   E   +   +    V+ + GLV              G++ ++AQ+I +L+ +  L
Sbjct: 94  KDTTPEEARGLLPMIDLGDVIGVTGLVRRTKR---------GELTINAQQITMLTKSL-L 143

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           P+P           R++ R+LD+  +   K    +R+RI++S+R  +  E F+E  TP+L
Sbjct: 144 PMPEKYHGLADIETRYRKRYLDIMVNEESKLRFQQRSRIVSSLRRFLEDEGFMEVETPML 203

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSD 228
                    +              L  AP+ Y + ++ SG  D+ F+I   FR+E   + 
Sbjct: 204 QPIYGGATAEPFKTHHNTLKLDMYLRIAPELYLKRVLVSGLTDKVFEINRNFRNEGVSTR 263

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
             P EF  ++   ++ + +D++  +E +   +               ++ +     
Sbjct: 264 HNP-EFTMMECYWAYADYEDVMGLVERMFETLALAVHGTTEFEFGDKQLSFKGPFP 318



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 50/133 (37%), Gaps = 5/133 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E   I  AH     P+      K          +++  CNG+EI +     +  
Sbjct: 367 LFEEKVEATLIQPAHVI-HFPKDISPFAKEVPGEPRLVERFETYCNGWEIGNAFSELNDP 425

Query: 502 EVMLQAFSNVGISKEVVENR----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                              +          A   GMPP GG+  G+DR++MLL  + ++R
Sbjct: 426 VEQRARMVEQMEQAHARGEKEKTLDEDFLDAMDQGMPPAGGLGIGVDRLIMLLTNSPSIR 485

Query: 558 EVSLFPMSQNFCD 570
           ++ LFP  ++  D
Sbjct: 486 DIILFPARRHKSD 498


>gi|49477543|ref|YP_036328.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|49329099|gb|AAT59745.1| aspartate--tRNA ligase (aspartyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 432

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 72/279 (25%), Positives = 127/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R     C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A F 
Sbjct: 5   MKRSLIKEC----TEKSGKVVSLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENEFAGF- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E ++ + G ++  S   +        +E+ A +++IL+ AE LP  +  ++  
Sbjct: 60  ---KVDVESIVHVIGEIVETSKTEL-------GVEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 266



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/164 (29%), Positives = 68/164 (41%), Gaps = 28/164 (17%)

Query: 406 PLKFCSFA--ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
             K+C  +   D      + LG      +  EF +I  +P             A   +TM
Sbjct: 287 KSKYCKESPVGDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTM 335

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P     S+  +         +DL+  G EI SG  R H  E++L +F   G+      ++
Sbjct: 336 PNNENSSITDS---------FDLLYKGLEITSGAQRIHNYEMLLDSFKGKGLHP----DK 382

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           F      F+ G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 383 FQSYLNTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|152980207|ref|YP_001352950.1| lysyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166229808|sp|A6SXF3|SYK_JANMA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|151280284|gb|ABR88694.1| lysyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 511

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 67/311 (21%), Positives = 119/311 (38%), Gaps = 36/311 (11%)

Query: 7   HSCGDLGVSDVGSF----------VRLSGWVHRVRPHGG-IIFLDIRDHYG-----ITQV 50
           H   DL     G            V L+G +   R  G    F  ++D  G       Q+
Sbjct: 45  HKAADLHEKYDGKTREELEAEPVTVTLAGRMMLKREAGKKAAFATLQDASGAKADGRIQI 104

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
            A  D        ++    +  I G+V             T ++ +   ++ +L+ +   
Sbjct: 105 YATLDLTGEAAMAALHHYDLGDILGVV------GTLFKTKTDELTIKVTELRLLTKSLR- 157

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           PLP        +  +++ R++DL  +   +   K RT  I+S+R  M   +F+E  TP+L
Sbjct: 158 PLPDKFHGLADQETKYRQRYVDLIMNEDTRRTFKARTAAISSIRRFMAENDFMEVETPML 217

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T      A+ F+          + L  AP+ Y + L+  GFDR F+I   FR+E     
Sbjct: 218 HTIPGGAAAKPFVTHHNALDMEMF-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGVSIR 276

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICY 279
             P EF  ++   ++ +   +++  E V+R    +     T++           F R+  
Sbjct: 277 HNP-EFTMMEFYAAYTDYKWLMDFTEAVIRQAAIDAHGTATLTYGGRELDLAKPFHRLTI 335

Query: 280 DDAIRRYGTDK 290
             AI +Y    
Sbjct: 336 VGAINKYAPQY 346



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 113/334 (33%), Gaps = 44/334 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+ ++D +     +L  +      G   +  F+       +  +    P+L    ++   
Sbjct: 203 FMAENDFMEVETPMLHTI-----PGGAAAKPFVTHHNALDMEMFLRIAPELYLKRLVVGG 257

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA------RSQGQPGL 356
            +          ++ +S+    E   +       +  +     E         + G   L
Sbjct: 258 FDRVFEINRNFRNEGVSIRHNPEFTMMEFYAAYTDYKWLMDFTEAVIRQAAIDAHGTATL 317

Query: 357 AYIFWRLDESGN---VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            Y    LD +     +  +G + K+      E +     ++   +     G      S  
Sbjct: 318 TYGGRELDLAKPFHRLTIVGAINKYAPQYTNEQLHDAEFIK---AELKKFGVKPHAHSGL 374

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
              +  + +E        +E  +I+D+P                            + +D
Sbjct: 375 GALQLALFEE--TAEAQLWEPTYIIDYP---------------------VEVSPLARASD 411

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
            ++    +++L   G EIA+G    + +E     F     +K+  +           RA 
Sbjct: 412 TVAGITERFELFMVGREIANGFSELNDAEDQAARFQAQVAAKDAGDEEAMYYDADYIRAL 471

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + GMPP GG   GIDR++M++  + N+R+V LFP
Sbjct: 472 EYGMPPTGGCGIGIDRLMMIITDSPNIRDVLLFP 505


>gi|295101200|emb|CBK98745.1| asparaginyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 462

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 67/349 (19%), Positives = 117/349 (33%), Gaps = 51/349 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCID 74
           G+ V + GW   +R    I F+ + D      +    ++        V        L + 
Sbjct: 17  GTVVTVCGWAKNIRDSKNIGFIALSDGGCFKTLQVVLEAGKLANYDEVVHTGLYSSLRVV 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++                EL+A  +EIL        P+  ++   E +R     L  R
Sbjct: 77  GRIVLTPQ-------AKQPFELNADSVEILGDCPADEYPLQKKKMSMEYLR-TMPTLRPR 128

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +T +     R+    ++        F+   +P+LTAS  EGA +    + ++       
Sbjct: 129 TNTFNAAFRVRSVAAYAIHKFFQENGFVYAHSPLLTASDCEGAGEMFRVTTLDLDNVPKN 188

Query: 190 ---------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+  P       Q +   MA  F + +   P FR E   + R   EF+ +
Sbjct: 189 EDGTVDYTKDFFEKPVNLTVSGQLEAEAMAMAFGKVYTFGPTFRAEKSFTTRHAAEFWMI 248

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + EM+F + +  ++T E + + V     +       F                      R
Sbjct: 249 EPEMAFCDLNGYMDTAEAMTKYVIRYVLDNCPDEMAFFNQFIDKGLIERLELVANSEFGR 308

Query: 277 ICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
           I Y DAI     +    + P+       TEH  +    VF K + V   
Sbjct: 309 ISYTDAIEILKKNNKKFQFPVEWGVDIQTEHERYLTEVVFKKPVFVTDY 357



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 49/136 (36%), Gaps = 24/136 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P     +E K        F M Q               A    LV    E+ 
Sbjct: 350 KPVFVTDYP-----KEIKS-------FYMKQNAD--------GKTVAAADMLVPGIGELI 389

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + ++     +G+ K    + +       + G   H G   G +R++M L G
Sbjct: 390 GGSQREEDYDKLVTRMDELGLDK----SSYDWYLNLRKFGGVEHAGYGLGFERMIMYLTG 445

Query: 553 AKNVREVSLFPMSQNF 568
            +N+R+V  FP +   
Sbjct: 446 IQNIRDVLPFPRTAYG 461


>gi|195448202|ref|XP_002071554.1| GK25859 [Drosophila willistoni]
 gi|194167639|gb|EDW82540.1| GK25859 [Drosophila willistoni]
          Length = 578

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 116/264 (43%), Gaps = 10/264 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G +     V ++G VH +R  G  +IF D+R      QV+A+  S   E A    S+   
Sbjct: 102 GETLENVNVSVAGRVHAIRESGAKLIFYDLRGEGVKLQVMASAKSYKSEEA--FVSDTDK 159

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++             G++ +   +I++LS      LP        +  RF+ R+L
Sbjct: 160 LRRGDIIGVQG--HPGKTKKGELSIMPTEIKLLSPCL-HMLPHLHFGLKDKETRFRQRYL 216

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQG 189
           DL   + + +    R +II+ +R  +    F+E  TP++   +    A+ F+      + 
Sbjct: 217 DLILNNKVRETFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFITHHNDLKM 276

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             + +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D+
Sbjct: 277 DLF-MRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYADV 334

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN 273
           ++  E ++ G+ +       V+ +
Sbjct: 335 MDITEQMVSGMVKAIRGSYKVTYH 358



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++L     EI +     +   V  + F      K   ++           A +
Sbjct: 463 TPGLTERFELFVAKKEICNAYTELNDPVVQRERFEQQANDKAAGDDEAQMVDENFCTALE 522

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG   GIDR+ M L  + N++EV LFP  +
Sbjct: 523 YGLPPTGGFGMGIDRLTMFLTDSNNIKEVLLFPAMK 558


>gi|213021628|ref|ZP_03336075.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 145

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 50/143 (34%), Positives = 77/143 (53%)

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
             H+PFT P+    S          A  YD+V NG+E+  G +R H  E+    F  +GI
Sbjct: 1   AMHHPFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGI 60

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLM 573
           +++    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+ 
Sbjct: 61  NEQEQREKFGFLLDALKYGTPPHVGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMT 120

Query: 574 GSPSTVSVEQLRELGLRIVENPK 596
            +PS  +   L ELG+++V+  +
Sbjct: 121 EAPSFANQAALTELGIQVVKKAE 143


>gi|254362094|ref|ZP_04978216.1| asparagine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153093653|gb|EDN74612.1| asparagine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 467

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 75/403 (18%), Positives = 131/403 (32%), Gaps = 54/403 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSA 57
           M ++ T S    G   VG    + GWV   R    G+ FL + D       Q + N D  
Sbjct: 1   MSKFPTVSEILSGKIAVGEEATVRGWVRTRRDSKAGLSFLSVYDGSCFDPIQAIINNDLP 60

Query: 58  CFE-IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
            +      + +   + + G V+   AE          +EL A K+E+L   E+       
Sbjct: 61  NYNAEVLHLTAGCSVVVTGKVVESPAEGQA-------VELQASKVEVLGWVEDPDTYPMA 113

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + +      +   L  R + +      R  +  ++      + F   +TP++TAS  EG
Sbjct: 114 AKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPVITASDTEG 173

Query: 177 ARDFLVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPC 219
           A +    S ++                 F+          Q      A    + +   P 
Sbjct: 174 AGEMFRVSTLDLENLPRGENGKVDFNQDFFGKESFLTVSGQLNAETYACALSKVYTFGPT 233

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------- 266
           FR E+  + R   EF+ ++ E++F + +D     E++L+ VF+                 
Sbjct: 234 FRAENSNTTRHLAEFWMMEPEVAFADLNDNAKLAEDMLKYVFKAVLAERKDDMEFFVKHV 293

Query: 267 --------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
                    N +++ F ++ Y DAI        +   P+         + SE   F    
Sbjct: 294 DKEAISRLENFINSPFAQVDYTDAIEILLKSGKEFEFPVSWG----IDLSSEHERFLAEE 349

Query: 319 SVNPGYEVWAIPAKGGGGNRAFCDR-MNEWARSQGQPGLAYIF 360
                  V   P           D      A     PG+  I 
Sbjct: 350 HFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    EV+ Q  + +G++       +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEVLDQRMNEMGLNP----EDYWWYRDLRK 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 427 YGTVPHSGFGLGFERLIVYVTGLQNIRDVIPFPRAPR 463


>gi|325851852|ref|ZP_08171017.1| asparagine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325484694|gb|EGC87607.1| asparagine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 463

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 57/290 (19%), Positives = 114/290 (39%), Gaps = 26/290 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE 60
             RT     L  +D G  + + GWV   R    + F+ + D   I   Q+V +P     E
Sbjct: 1   MKRTKVVDALACTDFGKDINVKGWVRSHRSSKAVDFIALNDGSTIKNIQIVVDPSKMDAE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             KS+ +   + + G ++    +   +       E+  ++IEI  +      P+  + + 
Sbjct: 61  ELKSITTGACISVVGTLVESQGKGQTS-------EIQCKEIEIYGLC-PSDYPMQKKGQS 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KY  + LR +T       R  +  ++        F    TP++T S  EGA + 
Sbjct: 113 FEYMR-KYGHMRLRTNTFGAVFRIRHNMAIAIHRYFHEHGFYYFHTPLITGSDAEGAGNM 171

Query: 181 LVPSRVNQG------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDP 225
              + ++               F+          Q +  L A+     +   P FR E+ 
Sbjct: 172 FQVTTLDLDRIAKSGKVDYNADFFGKRTNLTVSGQLEGELGATSLGAIYTFGPTFRAENS 231

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + R   EF+ ++ E++F+++D++++  E+ ++       +       FL
Sbjct: 232 NTPRHLAEFWMVEPEVAFIDKDELMDLEEDFIKYCVRWALDNCKDDLEFL 281



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 55/146 (37%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P      E K      NP        ++++G D+       
Sbjct: 338 HERYLVEEHFRRPVIMTDYP-----SEIKSFYMKKNP------DGKTMQGTDV------- 379

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G +R    + +L    + G+ +      +       + G  PHGG   
Sbjct: 380 --LFPRIGEIIGGSVREENYDKLLAEIDSRGMKR----EVYDWYLDTRKYGTCPHGGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G +N+R+V  F  +  
Sbjct: 434 GFERLILFVTGMQNIRDVIPFARTPK 459


>gi|149196138|ref|ZP_01873194.1| asparaginyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149140985|gb|EDM29382.1| asparaginyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 459

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 71/381 (18%), Positives = 135/381 (35%), Gaps = 62/381 (16%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSV 65
             +L  S VG  + L+GW+   R   GG  FL+I D       QV+A+ +   ++  KS+
Sbjct: 4   IKELDKSKVGESISLAGWLRTKRDSKGGFSFLEINDGSSFKGIQVIADQNLDNYDDVKSL 63

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L + G ++    +  +        EL A+ I I    ++  L   G   +     
Sbjct: 64  HTGASLKLTGKLVESPGKGQS-------FELQAESILIYGNTDQSYLLQKGRINF--ETL 114

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            +   L  R +++   +  R ++  +        +F+   TPI+TAS  EGA      + 
Sbjct: 115 RESAHLRCRTNSIGAVMRVRNQLSKATHDFFQNRHFLNLHTPIITASDCEGAGQMFQVTT 174

Query: 186 VNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           ++                 F+          Q      A G  R +   P FR E+  + 
Sbjct: 175 LDMDKPPKNDLNKVDYKKDFFGKKTHLTVSGQLNGETYACGLGRIYTFGPTFRAENSNTS 234

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG--------------------- 267
           R   EF+ ++ E +F E ++  +   + L+  F+                          
Sbjct: 235 RHLSEFWMVEPEAAFFELEENADLARDYLKYCFKSVLETSADDLEFFDQRIEKGIITKLE 294

Query: 268 NTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYE 325
                 F RI Y +A++           P+   +   +EH  +    +F + + V    +
Sbjct: 295 TLSDAEFTRITYTEAVKLLEKTDKKFEFPVKWGIDLQSEHERYLTEEIFKQPVIVTDYPK 354

Query: 326 VWAIPAKGGGGNRAFCDRMNE 346
                       +AF  ++N+
Sbjct: 355 DI----------KAFYMKLND 365



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 27/143 (18%)

Query: 427 INCNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           +    F+    + D+P        K I      F M          +D  +++A   D++
Sbjct: 338 LTEEIFKQPVIVTDYP--------KDIKA----FYMK-------LNDDEKTVRAL--DVL 376

Query: 486 CNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           C    EI  G  R    +++L     + ++       +       + G  PH G   G +
Sbjct: 377 CPQIGEIIGGSQREENLDLLLNRMKTLDLNP----EDYSWYLDLRRYGSVPHSGFGLGFE 432

Query: 545 RIVMLLLGAKNVREVSLFPMSQN 567
           R+V    G  N+R+V  FP +  
Sbjct: 433 RLVQFCTGMSNIRDVIPFPRTPK 455


>gi|289741863|gb|ADD19679.1| class II lysyl-tRNA synthetase [Glossina morsitans morsitans]
          Length = 566

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 97/576 (16%), Positives = 172/576 (29%), Gaps = 111/576 (19%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G       + ++G VH +R  G  +IF D+R      QV+AN        A +   +   
Sbjct: 90  GEMLENEKLSIAGRVHAIRESGAKLIFYDLRGEGVKLQVMANAKLYGSGTA-AFEIDTNK 148

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++  +     A    G++ +  Q+I++LS      LP        +  R++ R+L
Sbjct: 149 IRRGDIVGING--FPAKTKKGELSIVPQEIKLLSPCL-HMLPHLHFGLKDKETRYRQRYL 205

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL   + + +N   R ++I+ +R  +    F+E  TP++        A+ F+        
Sbjct: 206 DLILNNKVRENFHTRAKVISYIRQFLDGMGFLEIETPMMNMIPGGATAKPFITHHNELNM 265

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             + +  AP+ Y ++L+  GFDR                                     
Sbjct: 266 DLF-MRIAPELYHKMLIVGGFDR------------------------------------- 287

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
                  +  +  +F N      +       +    Y  D  D      +  +TE  V  
Sbjct: 288 -------VYEIGRQFRNEGIDMTHNPEFTTCEFYMAYA-DYHD------IMEITEQMVSG 333

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNV 369
             R       +           +G  G     D    + R         +         +
Sbjct: 334 MVRAIHGTYKIK-------YHPEGAEGPVQEIDFTPPFKR---------VSMITTLEEKL 377

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
               P A       T     +L              P               +E  I   
Sbjct: 378 KVQFPPASEFASAKTNEFLSQLCANHN----VECPAPRTTARLLDKLVGEFVEEYCI--- 430

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
                 +I D                 +P  M                   +++L     
Sbjct: 431 ---NPTFICD-----------------HPQIMSPLAKYHRGVP----GLTERFELFVMKK 466

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDR 545
           EI +     +   V  + F      K   ++           A + G+PP GG   GIDR
Sbjct: 467 EICNAYTELNDPVVQRERFEQQANDKAAGDDEAQLVDENFCTALEYGLPPTGGWGMGIDR 526

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
           + M L  + N++EV LFP  +   +     P+ V+ 
Sbjct: 527 LTMFLTDSNNIKEVLLFPAMKP-DNPNRAHPAEVNN 561


>gi|284037331|ref|YP_003387261.1| asparaginyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283816624|gb|ADB38462.1| asparaginyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 479

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 56/281 (19%), Positives = 104/281 (37%), Gaps = 23/281 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L  +  G+ V + GWV   R     +F+ + D   I  + A       E  +       L
Sbjct: 10  LKTAPTGTEVTVKGWVRTKRESKNAVFIALNDGSTINTIQA-----VAEAGQLPEETLKL 64

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  ++ + + + +      +E+    + I   A+    P+  +R   E +R +   L
Sbjct: 65  ITTGACLAVTGQLVESQGAGQAVEVKIANVTIYGTADPDKYPLQPKRHSLEFLR-EIAHL 123

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---- 187
             R +T    +  R  +  ++        F   +TPI+TAS  EGA +    + ++    
Sbjct: 124 RPRTNTFSAILRIRHALAFAVHKYFNDNGFYYLNTPIITASDAEGAGEMFRVTTLDATKP 183

Query: 188 ----------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q +  L A    + +   P FR E+  + R   EF
Sbjct: 184 PLTEDGKVDYSQDFFGRETNLTVSGQLEGELGAMALGKIYTFGPTFRAENSNTTRHLAEF 243

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           + ++ EM+F E +D +N  E+ ++ V             FL
Sbjct: 244 WMIEPEMAFYELEDNMNLAEDFVKTVIRYALQHCADDLAFL 284



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 50/143 (34%), Gaps = 14/143 (9%)

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNP-----FTMPQGGMESLKGNDLLSIKAFQYDLV 485
            +E  W +D      +E E+ +   H          P+         D         D++
Sbjct: 341 QYEVSWGVDL----QSEHERYLVEKHFKKPVILTNYPREIKAFYMKQDPDGKTVRAMDVL 396

Query: 486 CNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
             G  EI  G  R    + +      VGI  E +           + G  PH G   G +
Sbjct: 397 FPGIGEIIGGSQREDDLDKLTARMQEVGIEPEALW----WYLDTRRFGSAPHAGFGLGFE 452

Query: 545 RIVMLLLGAKNVREVSLFPMSQN 567
           R+V+ + G  N+R+V  FP +  
Sbjct: 453 RLVLFVTGMGNIRDVIPFPRAPK 475


>gi|240144533|ref|ZP_04743134.1| asparagine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257203443|gb|EEV01728.1| asparagine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291538061|emb|CBL11172.1| asparaginyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 463

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 56/352 (15%), Positives = 117/352 (33%), Gaps = 51/352 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVL 71
              V   V + GWV  +R      F+ + D      V    +     F+  + +     +
Sbjct: 14  EEYVDQTVTIGGWVRSIRNSKNFGFIVVNDGTFFEPVQVVYSNVLENFDDVEKLNVGAAI 73

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +++               E+ A++IEI  V+         ++++          L
Sbjct: 74  IVTGKLVATPG-------TKQPFEIQAEQIEIEGVSTPDYPLQ--KKKHSFEYLRTISHL 124

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +T       R+ I  ++       +F+   TP++T S  EGA +    + ++    
Sbjct: 125 RPRTNTFEAVFRVRSLIAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDMNNL 184

Query: 190 ------------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+  P       Q      A  F   +   P FR E+  + R   EF
Sbjct: 185 PKNPDGTVDYSKDFFNKPTNLTVSGQLNGETYAMAFKNIYTFGPTFRAENSNTTRHAAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNN 273
           + ++ E++F + +D +   E++L+ +                            +  +++
Sbjct: 245 WMIEPEIAFADLEDDMILAESMLKYIINYVLENAPEEMAFFNNFIDKGLLERLQHVANSD 304

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
           F R+ Y +A+             +       TEH  +    +F + + V   
Sbjct: 305 FARVTYTEAVEILEKHNDKFEYKVSWGTDLQTEHERYLTEEIFKRPVFVTDY 356



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 51/139 (36%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K        F M          ND     A    LV    EI 
Sbjct: 349 RPVFVTDYP-----KEIK-------AFYMKM--------NDDGKTVAAVDCLVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + +L   + +G+     E  +       + G   H G   G +R VM L G
Sbjct: 389 GGSQREDDYDKLLARINELGLK----EEDYQFYLDLRKYGSARHAGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N C+L
Sbjct: 445 MSNIRDVIPFPRTVNNCEL 463


>gi|331007549|ref|ZP_08330706.1| Lysyl-tRNA synthetase (class II) [gamma proteobacterium IMCC1989]
 gi|330418639|gb|EGG93148.1| Lysyl-tRNA synthetase (class II) [gamma proteobacterium IMCC1989]
          Length = 512

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 67/336 (19%), Positives = 141/336 (41%), Gaps = 30/336 (8%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H   DL             ++   V ++G V   R      F+ ++D  G  Q+ A+ 
Sbjct: 43  REHKAADLQAEFGEKTKAELEELDHKVSVAGRVMAKRGP----FMVLQDVTGRVQLYASK 98

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+        ++    L   G +++ +     +    G + ++ ++ ++L+ +   PLP 
Sbjct: 99  DAQN-----QLKETCGLWDIGDIVNVTGALHKSG--KGDLYVNLEQFQLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + IR++ R++DL  +T  ++    R+++I+ +R  + + +F+E  TP+L +  
Sbjct: 151 KYHGLADQEIRYRQRYVDLMVNTDVRDTFKIRSQVISFIRSYLNSSDFLEVETPMLQSIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R ++I   FR+E   +   P 
Sbjct: 211 GGATARPFVTHHNALDMDMY-LRIAPELYLKRLVVGGFERVYEINRNFRNEGLSTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D+++  E++LR +         V N       +           D
Sbjct: 269 EFTMLEFYQAYADFNDLMDLTEDMLRQIALNVLGSTDVKNT----VKNAEGEVTEEITYD 324

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
              P    +V +  +     + +++L+   G    A
Sbjct: 325 FAKPFTRLSVFDSILQYNDDIKAEVLADEQGARGIA 360


>gi|183221280|ref|YP_001839276.1| lysyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911371|ref|YP_001962926.1| lysyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167776047|gb|ABZ94348.1| Lysine--tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167779702|gb|ABZ98000.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase; LysRS) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 497

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 75/370 (20%), Positives = 131/370 (35%), Gaps = 31/370 (8%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +L G +H  R  G   F  ++D  G+ Q+ A  D    E     +S  +    G+     
Sbjct: 57  KLGGRLHAKRVMGKASFAHLKDAEGLIQLYATRDDLGEENYSLFKSLDLGDWIGI----- 111

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFLDLRR 135
            E        G+  L    +++L+        V  +             R++ R++DL  
Sbjct: 112 -EGWLFQTQKGETTLHLTNVQLLAKCIRPLPVVKEKDGVIYDAFSDVEQRYRMRYVDLVV 170

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           +   +   K R+RII+ +R  +  E F+E  TP++   +   A    V           L
Sbjct: 171 NENVRETFKMRSRIISEIRKFLTNEGFLEVETPMMQPIAGGAAARPFVTHHNTLDMELFL 230

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  G DR F++   FR+E   +   P EF  ++  M+F + + +L+  E
Sbjct: 231 RIAPELYLKRLIVGGMDRVFELNRNFRNEGISTKHNP-EFTMMEAYMAFGDMEAMLSLTE 289

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
            ++  V      G                  YG D+ DL  P       +         F
Sbjct: 290 RMIVSVATAIGKGLKFP--------------YGKDQIDLTPPWKRVKYIDIIKDYSGIDF 335

Query: 315 SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374
           S+I  V    E           + +     ++   S  +P L    +  D    +    P
Sbjct: 336 SQITDVKEAIEKAKAKGVDSSDSVSIWKVCDDVFSSLVEPHLIQPIFITDFPKEL---SP 392

Query: 375 VAKHLNIVNT 384
           +AK       
Sbjct: 393 LAKSREDDPK 402



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 57/145 (39%), Gaps = 25/145 (17%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           ++  +  +  +I DFP                        +   + +D   +   +++  
Sbjct: 372 LVEPHLIQPIFITDFP-------------------KELSPLAKSREDDPKYV--ERFEPY 410

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAA 541
             G EI +     +      + F      +E  ++          RA + G+PP GG+  
Sbjct: 411 VAGREIGNAFTELNDPFDQRERFEEQVKQREAGDDEAFMMDDDYIRALEYGLPPTGGLGI 470

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           GIDR+VMLL  + ++R+  LFP+ +
Sbjct: 471 GIDRLVMLLTDSHSIRDTILFPLMR 495


>gi|72163280|ref|YP_290937.1| lysyl-tRNA synthetase [Thermobifida fusca YX]
 gi|71917012|gb|AAZ56914.1| lysyl-tRNA synthetase, class-2 [Thermobifida fusca YX]
          Length = 496

 Score =  186 bits (472), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/313 (20%), Positives = 121/313 (38%), Gaps = 27/313 (8%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RT +  ++             G  V L+G V   R  G + F  IRD  G  QV+ + D 
Sbjct: 36  RTTTIAEVRAKHGDLAPDVYTGERVALTGRVMLYRTGGKLCFATIRDASGDIQVMLSLDR 95

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E   + +S+  L   G  +    E I +    G++ + A    + S     PLP   
Sbjct: 96  VGAERLAAWKSDVDL---GDHIGVEGEVITSR--RGELSILADTWTLTSKCLR-PLPDKH 149

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
           +       R + R++DL  +   + + ++R R + ++R  +    +IE  TP+L      
Sbjct: 150 KGLTDPEARVRQRYVDLIVNPESREMVMRRARTVRALRDGLHNRGYIEVETPMLQQVHGG 209

Query: 176 G-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+          Y L  AP+ Y + ++  G ++ F+I   FR+E   S   P EF
Sbjct: 210 ATARPFVTHINAYDLDLY-LRIAPELYLKRMVVGGVEKVFEINRNFRNEGADSTHNP-EF 267

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRR 285
             L+   ++ + + + +    +++           V            + +I    A+  
Sbjct: 268 TMLEFYQAYADYNVMADITRELIQEAAVAVFGSTVVQRGDTEVDLGGEWPQITLYGAVSE 327

Query: 286 YGTDKPDLRNPII 298
              ++   R P+ 
Sbjct: 328 ALGEEVTPRTPVE 340



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 69/209 (33%), Gaps = 32/209 (15%)

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E   +   G V++ L    T    V    +  D+                    H+ +EL
Sbjct: 315 EWPQITLYGAVSEALGEEVTPRTPVETLRKLADARGVEWNPE----WGPGKLVEHLFEEL 370

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
             +  +  +  ++ D+P               +P T        L           ++DL
Sbjct: 371 --VQDSLVQPTFVRDYPL------------ETSPLTRQHREDPLL---------TEKWDL 407

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIA 540
           +  G E+ +G           +  +   +                 RA +  MPP GG+ 
Sbjct: 408 IGFGMELGTGYSELIDPVEQRRRLTEQSLLAAGGDPEAMQLDEDFLRALEYAMPPTGGVG 467

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G+DR++M   G KN+RE  LFP+ +   
Sbjct: 468 VGVDRLLMAFTG-KNIRETILFPLVRQEQ 495


>gi|323491500|ref|ZP_08096682.1| lysyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323314254|gb|EGA67336.1| lysyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 505

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 62/285 (21%), Positives = 126/285 (44%), Gaps = 25/285 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V   R      FL I++  G  Q  A  D     + K ++ ++     G ++  
Sbjct: 68  VAIAGRVMAKRGP----FLAIQETSGRIQAYAAKD-----VQKELKEKYQGLDIGDIIGV 118

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                 +    G + ++ +  E+L+ A   PLP        + +R++ R++DL  +   +
Sbjct: 119 KGALHKSG--KGDLYVNMESYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNQDSR 175

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
              + R+++++++R  M ++ ++E  TP++        AR F+          Y L  AP
Sbjct: 176 EAFIIRSKLVSAIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDMY-LRVAP 234

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GFDR F+I   FR+E   S R   EF  ++   ++ +  D+++  E +L 
Sbjct: 235 ELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLS 293

Query: 259 GVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
            V  E     ++            + R+   +AI+ Y  D  +++
Sbjct: 294 TVAMEVLGSTSMPYGDETVEFGGTYARMSMFEAIKHYNPDHAEIQ 338



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E ++         P       + +D       +++    G E+A+G    + ++   + F
Sbjct: 381 EPQLIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAQDQDERF 440

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K+  ++           A + G+PP  G   GIDR+ ML      +R+V LFP 
Sbjct: 441 KAQVNAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFPA 500

Query: 565 SQ 566
            +
Sbjct: 501 MR 502


>gi|238757642|ref|ZP_04618826.1| Asparaginyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238704147|gb|EEP96680.1| Asparaginyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 466

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 140/424 (33%), Gaps = 50/424 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSE 68
           G + V S V + GWV   R    GI F+ + D      + A  +++     +    + + 
Sbjct: 12  GRAAVDSEVTVRGWVRTRRDSKAGISFVAVYDGSCFDPLQAVVNNSLPNYQDEVLHLTTG 71

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G V++   E  +        E+ A  I+++   ++        + +      + 
Sbjct: 72  CSVEVTGTVVASPGEGQS-------FEIQATAIKVVGWVDDPDTYPMAAKRHSIEYLREV 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R + +      R  +  ++        +   STP++TAS  EGA +    S ++ 
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 189 --------------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q      AS   + +   P FR E+  + R  
Sbjct: 185 ENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYASALSKVYTFGPTFRAENSNTSRHL 244

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTD 289
            EF+ ++ E++F   DD+    E +L+ VF+   N       F   R+  D   R     
Sbjct: 245 AEFWMVEPEVAFASLDDVAALAEKMLKYVFQAVLNERADDMKFFAERVDKDAVDRLQRFV 304

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKI------------LSVNPGYEVWAIPAKGGGGN 337
             D    +   +  E    S  +  + +                  ++   +        
Sbjct: 305 TSDFAQ-VDYTDAIEILQASGQKFENDVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI 363

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           +AF  RMNE        G       +   G    +G   +   +   +A    + +   D
Sbjct: 364 KAFYMRMNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKED 416

Query: 398 SCFF 401
             ++
Sbjct: 417 YWWY 420



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    +V+   
Sbjct: 347 EKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDAR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + +G++K      +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 407 LAEMGLNK----EDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRTPR 462


>gi|139438543|ref|ZP_01772059.1| Hypothetical protein COLAER_01057 [Collinsella aerofaciens ATCC
           25986]
 gi|133776082|gb|EBA39902.1| Hypothetical protein COLAER_01057 [Collinsella aerofaciens ATCC
           25986]
          Length = 471

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 51/278 (18%), Positives = 95/278 (34%), Gaps = 29/278 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV---LCID 74
           G  V ++GW+  VR      F+ + D      +    +    +    +  + V   L   
Sbjct: 22  GQTVTVAGWIKSVRDMKNFGFVTLNDGSCFRDLQVVMNREALDNYDEIAHQNVSAALICT 81

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V                 ELSA  IE+  V+         ++          + L  R
Sbjct: 82  GTVKLTPD-------APQPFELSATSIEVEGVSAPDYPLQ--KKRATVEFLRTQQHLRPR 132

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++      + F+  +TPI+T S  EGA +    + ++       
Sbjct: 133 TNLFRAVFRIRSVAAAAIHRFFQEQGFVYVNTPIITTSDCEGAGEMFRVTTLDPKNPPLT 192

Query: 190 ---------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+    +     Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 193 ESGEVDWSQDFFGKHASLTVSGQLNAENFAMAFGDVYTFGPTFRAENSNTTRHAAEFWMI 252

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           + EM+F + +D ++  E +L+ V ++         N L
Sbjct: 253 EPEMAFADLNDYMDNAEAMLKYVLKDVMATCPDELNML 290



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 49/149 (32%), Gaps = 24/149 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +     ++ D+P                 F M          ND     A  
Sbjct: 346 HERFLTEEHFKRPTFVTDYP------------AEIKAFYMRM--------NDDGKTVAAA 385

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    +++     ++G++      ++       + G   H G   
Sbjct: 386 DCLVPGIGEIIGGSQREERLDLLEARIKDLGMNP----EQYKYYLDLRRYGSCKHAGYGL 441

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G +R+VM L G  N+R+V   P +    D
Sbjct: 442 GFERLVMYLTGVGNIRDVLPHPRTVGNAD 470


>gi|156740890|ref|YP_001431019.1| asparaginyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|189083276|sp|A7NHQ4|SYN_ROSCS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|156232218|gb|ABU57001.1| asparaginyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 440

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 77/316 (24%), Positives = 125/316 (39%), Gaps = 33/316 (10%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---A 62
           T +  D+     G  V L+GWV      G ++F+ +RD  G+ Q V    +   E    A
Sbjct: 6   TATISDIAR-HNGRVVTLAGWVAHKTEKGKLVFIRLRDGSGVMQCVVFRKNVAEETFIAA 64

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +  E    I G V +            G  EL    IEI+ +A E P+     +E+  
Sbjct: 65  QRLTLESSCRITGTVRADER-------APGGFELDVNGIEIIQIAPEYPIQP---KEHGV 114

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
               ++R L +R    H  +  R  II + +  + A+ F+   TPILT  + EG  +   
Sbjct: 115 EFLMEHRHLWVRSSKQHALLRIRAEIIAAAQEWLNAQGFVRFDTPILTPCAAEGTTNLFA 174

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
               + G+ Y L Q  Q Y +  M S F + +   P FR E  ++ R   EF+ ++ E++
Sbjct: 175 TPYFDLGTAY-LGQTGQLYVEAGMMS-FGKVYCFGPTFRAEKSKTRRHLTEFWMIEPEVA 232

Query: 243 FVEQDDILNTMENVLRGVFEEFSNG---------------NTVSNNFLRICYDDAIRRYG 287
           F   DD L   E  +  + +                          F RI YD+A+R   
Sbjct: 233 FALHDDNLALQEQFVSAIVQRVLERRADDLATLERDTKPLERCVPPFPRITYDEALRLIA 292

Query: 288 TDKPDLR--NPIIMHN 301
               ++    P+    
Sbjct: 293 ERYAEVEGCTPLEWGE 308



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 21/161 (13%)

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG- 465
            ++            ++LG  +       +  D P +      ++   A   F M     
Sbjct: 293 ERYAEVEGCTPLEWGEDLGAPHETLIASMF--DRPVFV-----ERFPSAIKAFYMEPDPN 345

Query: 466 -MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
             E     DLL+ + +         EI  G  R H + ++ +     G++ +     +  
Sbjct: 346 RPEVALCADLLAPEGYG--------EIIGGSQRIHDAALLERRIREYGLNVDD----YRW 393

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
                + G  PH G   GI+R    + G  ++RE   FP  
Sbjct: 394 YIDLRRYGSVPHSGFGMGIERATAWIGGTHHIRETIPFPRM 434


>gi|307165837|gb|EFN60200.1| Lysyl-tRNA synthetase [Camponotus floridanus]
          Length = 585

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 97/580 (16%), Positives = 164/580 (28%), Gaps = 111/580 (19%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G     +   ++G VH +R  G  ++F D+R      Q++AN     ++       +   
Sbjct: 107 GEQMKDTIESVAGRVHAIRESGSKLVFYDLRGEGVKLQIMANAK--LYQCQDLFVRDTAK 164

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++        A   TG+  +    I +LS      LP           RF+ R+L
Sbjct: 165 IKRGDIIGVIG--YPAKSKTGEFSIIPSSIILLSPCL-HMLPHLHYGLKDRETRFRQRYL 221

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL   D + +    R RII  +R  +    F+E  TP++            +        
Sbjct: 222 DLILNDKVRRIFHIRARIIAYIRKFLDNMGFLEVETPMMNMIPGGATAKPFITHHNELNK 281

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              +  AP+ Y ++L+  G DR ++                                   
Sbjct: 282 DLYMRIAPELYLKMLVVGGLDRVYE----------------------------------- 306

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
                    +  +F N      +       +    Y  D  DL        +TE+ +   
Sbjct: 307 ---------IGRQFRNEGIDLTHNPEFTTCEFYIAYA-DYNDL------MEITENMISG- 349

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
                    V   +  W I      G+    D    + R      L  I         + 
Sbjct: 350 --------MVKAIHGSWKIEYNTNEGSTLTLDFTPPFKRISMMEELERI---------LD 392

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
              P A  LNI     I   L     D        P                    I  +
Sbjct: 393 VKLPAADQLNIPEANKILSDLC----DHHKIECPPPKTSARLLDKLVGSF------IEDS 442

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
                +I+D                 +P  M                   +++L     E
Sbjct: 443 IINPTFIID-----------------HPQVMSPLAKWHRS----KKGLTERFELFVGTKE 481

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRI 546
           I +     +   +  + F    + K   +            A + G+PP  G   GIDR+
Sbjct: 482 ICNAYTELNDPFIQRERFEQQAMDKAAGDEEAQLVDETFCTALEYGLPPTAGWGLGIDRL 541

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            M L    N++EV LFP  +   +           + L +
Sbjct: 542 TMFLTDTNNIKEVLLFPHMKPDENPNKNKEIVEDDKALSD 581


>gi|296089683|emb|CBI39502.3| unnamed protein product [Vitis vinifera]
          Length = 1537

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/352 (18%), Positives = 129/352 (36%), Gaps = 41/352 (11%)

Query: 1    MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
            + +Y   S GD  + D+   V L+G +   R     + F D+       QV+A+  S+  
Sbjct: 1028 IEKYGALSNGD-HLEDI--TVSLAGRIMSKRSSSSKLFFYDLHGDGAKVQVMADARSSDM 1084

Query: 60   EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF---- 115
            + A+  R    +    +V              G++ +  +   +LS    +         
Sbjct: 1085 DEAEFSRFHSGVKRGDIV---GVTGFPGKTKRGELSIFPKSFVVLSHCLHMMPRQKAGPG 1141

Query: 116  ------GEREY---------------PESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMR 153
                   + +                 +  R++ R+LDL  +  + +    R +II+ +R
Sbjct: 1142 SDNANVKKTDVWVPGSTRNPETYILKDQETRYRQRYLDLMLNMEVRQIFKTRAKIISYIR 1201

Query: 154  CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
              +   +F+E  TP++       A    V    +      +  AP+ Y + L+  G DR 
Sbjct: 1202 SFLDNLDFLEVETPMMNMIPGGAAARPFVTHHNDLNMKLYMRIAPELYLKELVVGGLDRV 1261

Query: 214  FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
            ++I   FR+E       P EF   +  M+F + +D++   E +L G+ +E + G  +  +
Sbjct: 1262 YEIGKQFRNEGIDLTHNP-EFTTCEFYMAFADYNDVMELTEKMLSGMVKELTGGYKIKYH 1320

Query: 274  FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
               +  D         + D   P    ++ E           K LS +   +
Sbjct: 1321 ANGLDKD-------PIEIDFTPPFRRIDMIEDLEKMADLSIPKDLSSDEANK 1365


>gi|115398990|ref|XP_001215084.1| lysyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114191967|gb|EAU33667.1| lysyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 609

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 61/294 (20%), Positives = 124/294 (42%), Gaps = 19/294 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-----AKSVR 66
           G       V+++G +   R  G  +IF DIR      QVV    ++  E+      + +R
Sbjct: 116 GEQKPDVQVQIAGRIFTKRASGAKLIFYDIRAEGAKVQVVCQAQNSKSEVPFEAQHEHLR 175

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              V+ I G        T   N   G++ + A +I +L+      +P        +  R+
Sbjct: 176 RGDVIGIVGY----PGRTSPKNRADGELSIFATEIVLLAPCL-HAIPSEHFGLQDKEQRY 230

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL  +   +N  + R++I+  +R      +F+E  TP++ A +    A+ F+   
Sbjct: 231 RQRYLDLIMNDRSRNVFITRSKIVRYIRNFFDNRDFVEVETPMMNAIAGGATAKPFVTHH 290

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                + + +  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ 
Sbjct: 291 NELDMNLF-MRVAPELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYA 348

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +  D++N  E ++ G+ +  + G   + +           +     P  R  +I
Sbjct: 349 DVYDVMNLTEELVSGLVKHVTGGYETTFH----TQTGEEYQVNWKAPWRRVEMI 398



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 4/97 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++      EI +     +        F      K+  ++           + +
Sbjct: 480 DVGLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQARQKDQGDDEAQLIDENFCTSLE 539

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G+PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 540 YGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 576


>gi|239616616|ref|YP_002939938.1| asparaginyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239505447|gb|ACR78934.1| asparaginyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 432

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 74/355 (20%), Positives = 128/355 (36%), Gaps = 30/355 (8%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKS 64
              DL    +G  V + GW+ R R  G I FL +RD  G  Q +          F++AK 
Sbjct: 5   YIRDL-KDHIGERVEIRGWLRRKRSSGKIHFLALRDGSGFVQGIVERSSVSEELFKLAKK 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           ++ E  +   G+V                +EL   +IE++   E+         ++    
Sbjct: 64  LKMESSIIARGIVREDPR-------APEGVELLIDEIEVVHQPEKDFPINKP--DHGIDY 114

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              +R L LR       +  R  II ++R       F+   TPI T S  E A +     
Sbjct: 115 LMDHRHLWLRSKRQFHILHIRHEIIRAVRDFYNERGFVLIDTPIFTGSIGESAGNCFEID 174

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             + G  Y L Q  Q Y +        + + + P FR E  ++ R   EF+  + E+++ 
Sbjct: 175 YFDYGKAY-LAQTGQLYLEAA-CMALGKVYNLGPTFRAEKSKTRRHLIEFWMNEAEVAYY 232

Query: 245 EQDDILNTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTD 289
           + +D +   E ++  V +               + S    +   F RI Y DAI+     
Sbjct: 233 QHEDNMKLQEELVSYVVQKTIERAANHLHAIGRDISKLEKIEAPFPRITYTDAIKLLQKK 292

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
             ++     +    E  +  EF     +       + + +       +   CD M
Sbjct: 293 GFNVNWGDDIGGDEETAIAEEFDKPVIVERYPRKMKAFYMQPDPENPDVVLCDDM 347



 Score = 60.9 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 4/76 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI     R    E++++     G+        +       + G  PH G   GI+R+V  
Sbjct: 355 EIIGASERIWDKELLIERIKEFGLDV----ESYSWYLDLREYGSVPHSGFGMGIERVVAW 410

Query: 550 LLGAKNVREVSLFPMS 565
           + G ++VRE   F  +
Sbjct: 411 IAGLEHVREAIPFART 426


>gi|147798996|emb|CAN72569.1| hypothetical protein VITISV_036995 [Vitis vinifera]
          Length = 601

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 134/353 (37%), Gaps = 30/353 (8%)

Query: 5   RTHSCGDL--------GVSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           RTH+   L           ++ S    V ++G +   R  G + F  +RD  G  Q+   
Sbjct: 108 RTHTANQLQDIYRHLGNGEELNSESDYVSIAGRIVARRAFGKLAFFTLRDDSGTIQLYCE 167

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            +    E  + +++   L   G ++  S          G++ +       L+ +  LPLP
Sbjct: 168 KERLLNEQFEQLKT---LVDIGDILGVSGSIKRTE--KGELSVYVNSFAXLTKSL-LPLP 221

Query: 114 VFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                      R++ R++D+     +     KR +I++++R  + +  F+E  TP+L  +
Sbjct: 222 DKYHGLTDVDKRYRQRYVDMIANPEVADIFRKRAKIVSAIRRTVESSGFVEVETPVLQGA 281

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           +        V    + G    L  A + + + ++  GF++ +++   FR+E   +   P 
Sbjct: 282 AGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLVGGFEKVYEMGRIFRNEGISTRHNP- 340

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  ++M  ++ + + ++N  E ++           T+      IC +   RR       
Sbjct: 341 EFTTIEMYEAYSDYESMMNMAEEIVTQCALAVCGKLTIDYQGTEICLERPWRRE------ 394

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
                 M N+ +     +F      + V     + A+       +++  +   
Sbjct: 395 -----TMLNLVKEATGIDFNELXXDIKVAKEVALRALGIGHDSKDKSSIEACT 442



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 24/112 (21%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMS-------EVMLQAFSNVGISKEVVENRF------ 522
           +    +++L   G E+A+               E  ++  +    +     +        
Sbjct: 484 AGLTERFELFICGRELANAFSELTDPMDQRGRLEEQVRQHNEKRAAVVSEPDHAEVKTTE 543

Query: 523 -----------GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                           A + GMPP  G+  G+DR+VMLL  + ++R+V  FP
Sbjct: 544 SEDESYEVTLDDDFLTALEYGMPPASGMGLGVDRLVMLLTNSASIRDVIAFP 595


>gi|84393963|ref|ZP_00992703.1| lysyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84375407|gb|EAP92314.1| lysyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 510

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 72/332 (21%), Positives = 137/332 (41%), Gaps = 47/332 (14%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H  GDL             ++   V ++G V   R      FL I++  G  Q  A  
Sbjct: 47  REHLAGDLQAEFGEKTKEELEELNHIVAIAGRVMAKRGP----FLAIQETSGRIQAYAAK 102

Query: 55  D--SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           D      E  + +    ++ + G +              G + ++ ++ E+L+ A   PL
Sbjct: 103 DVQKVLKEKYQGLDIGDIIGVKGALHKSGK---------GDLYVNMEEFELLTKALR-PL 152

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA 171
           P        + +R++ R++DL  +   +N  + R+++++S+R  M ++ ++E  TP++  
Sbjct: 153 PEKFHGLTDQEMRYRQRYVDLIVNEDSRNTFIVRSKLVSSIRNFMSSKGYLEVETPMMHV 212

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   S R 
Sbjct: 213 IPGGATARPFITHHNALDIDMY-LRVAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRH 270

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDD 281
             EF  ++   ++ +  D+++  E +L     +     ++            + R+   D
Sbjct: 271 NPEFTMMEFYQAYSDYKDLMDLTEEMLSTAAMDVLGSTSMPYGDETVEFGGTYARMSMFD 330

Query: 282 AIRRYGTDKP--------DLRNPIIMHNVTEH 305
           AI+ Y  +          DL+N  +M  + E 
Sbjct: 331 AIKHYTPENANIQALTEDDLQNRELMVKIAEE 362



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 12/159 (7%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEW---NEEEKKIDFAHNPFTMPQGGMESLKG 471
           +    IA+E+G+     +           E       E ++         P       + 
Sbjct: 354 ELMVKIAEEVGLYVEKFWTCG-----QLLEEIFGETAEPQLIQPTFITGYPADISPLARR 408

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYR 527
           +D       +++    G E+A+G    + ++   + F     +K+  ++           
Sbjct: 409 SDSNPFFTDRFEFFIGGREVANGFSELNDAQDQDERFKAQVNAKDAGDDEAMYYDADYIT 468

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + G+PP  G   GIDR+ ML      +R+V LFP  +
Sbjct: 469 ALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFPAMR 507


>gi|328866150|gb|EGG14536.1| lysine-tRNA ligase [Dictyostelium fasciculatum]
          Length = 513

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 109/256 (42%), Gaps = 8/256 (3%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + V ++G V   R  G  +F    D+ G+  +    +   +   +       +   G ++
Sbjct: 67  TVVTIAGRVKNKRAAGNALFFYDVDNNGV-SLQLLVNKKEYTSVEEFTKINSILRRGDII 125

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDT 137
               +   +   TG++ L   ++ +LS    +   V       +  RF+ R+LD+   D 
Sbjct: 126 GAKGKPGRSK--TGELSLFVSEMFLLSPCLHMLPRVA---LTDQETRFRQRYLDMIINDN 180

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           + +N V R+++I  +R  +    F+E  TP+L   +   A                +  A
Sbjct: 181 VKRNFVIRSKVIQGVRRYLDNLGFVEVETPMLNMIAGGAAAKPFKTHHNALSKDMFMRIA 240

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  G DR ++I   FR+ED      P EF   +  M++V+ +D++   E++L
Sbjct: 241 PELYLKQLVVGGMDRVYEIGKQFRNEDIDHTHNP-EFTTCEFYMAYVDYNDLMTMTEDML 299

Query: 258 RGVFEEFSNGNTVSNN 273
            G+  +    N +  +
Sbjct: 300 SGIVRDIHGTNKLKYH 315



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 6/115 (5%)

Query: 458 PFTMPQGGMESLKGNDLLSI--KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
            F +    + S       +I     +++L  N  E  +     +   V ++ F     +K
Sbjct: 399 AFIINHPEIMSPLSKYHRTIPGLTERFELFINQREACNAYTELNNPFVQIERFEEQAKAK 458

Query: 516 EVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + ++           + Q G+PP GG   G+DR VMLL    N++EV LFP  +
Sbjct: 459 AMGDDEAQLIDTVFTTSLQYGLPPTGGWGLGVDRFVMLLSDTYNIKEVILFPAMK 513


>gi|298527829|ref|ZP_07015233.1| asparaginyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511481|gb|EFI35383.1| asparaginyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 459

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 66/355 (18%), Positives = 116/355 (32%), Gaps = 43/355 (12%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RT     L        + L GWV   R   G++FL++ D    T +    D     I 
Sbjct: 1   MKRTRVKQALNAEAPVEGIMLKGWVRTKRESKGVVFLELNDGSCRTNLQIVVDPGVAGI- 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
                       G  +  +     +     + E+ A+++E++  A++   P+  +R   E
Sbjct: 60  ----DSLDGTGTGAAIKVTGNLQASPGKGQKWEVQAEQVELIGSADQESYPLQKKRHSDE 115

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R     L  R +        R+ +  ++        F    TPI+T S  EGA D  V
Sbjct: 116 FLRG-IAHLRPRTNKYGAMNRIRSELSFAVHQYFRERGFYYIHTPIITGSDCEGAGDMFV 174

Query: 183 PSRVNQG-----------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            + ++              F+   A      Q     MA      +   P FR E+  + 
Sbjct: 175 VTALDPDKAWKSPAEFGRDFFGKKAHLTVSGQLPAESMACALGDVYTFGPTFRAENSNTS 234

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS----------------- 271
           +   EF+ ++ E++F +  DI+   +  ++ +        +                   
Sbjct: 235 KHAAEFWMVEPEVAFADLQDIMEMAQGFVQALTGHVKKYCSQDLELFSRFVDQGLEDRLD 294

Query: 272 ----NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
                 F RI Y  A+            P+   +   TEH        F K L V
Sbjct: 295 SVLSQPFERISYTRALEVLQDCGRTFEYPVQWGLDLQTEHERFLCEEHFHKPLIV 349



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 52/153 (33%), Gaps = 24/153 (15%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
                   E  +   +  +   + D+P                PF M        + ND 
Sbjct: 327 GLDLQTEHERFLCEEHFHKPLIVHDYP------------AGIKPFYM--------RVNDD 366

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            S  A    L+    EI  G  R    EV+ +     G+S +             + G  
Sbjct: 367 SSTVAAMDVLLPRVGEIIGGSQREERLEVLDRRIQEAGLSFDEYW----WYRDLRRFGSV 422

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PH G   G +R++M + G  N+R+V  FP + N
Sbjct: 423 PHAGFGLGFERLLMFITGVSNIRDVIPFPRTPN 455


>gi|154249872|ref|YP_001410697.1| asparaginyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|154153808|gb|ABS61040.1| asparaginyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 432

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 70/310 (22%), Positives = 121/310 (39%), Gaps = 30/310 (9%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKS 64
              DL  + +G  + L GWV R R  G I F+++RD  G  QVV          FE A  
Sbjct: 5   YIKDL-KNYIGQDIELRGWVRRKRSSGKITFVEMRDGTGFVQVVIEKSIVGDENFEKADK 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R E  L + G V S              +E+ A   E++ V          + ++    
Sbjct: 64  LRLESSLIVRGKVRSDER-------APNGVEILAN--EVVPVQIPTEDFPIQKPDHSIEY 114

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
             ++R L LR       +  R  +I ++R      +F++  TPI T +  E A +     
Sbjct: 115 LMEHRHLWLRAKRQFHILRIRDAVIKAIRKFYWERDFVQVDTPIFTGAIGETAGNLFEVD 174

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             + G  Y L Q  Q Y +        + F + P FR E  ++ R   EF+  + E+++ 
Sbjct: 175 YFDYGKVY-LTQTGQLYLEAA-CMALGKVFNLGPTFRAEKSKTRRHLIEFWMNEAEVAYY 232

Query: 245 EQDDILNTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTD 289
           E +D +   E+++  + +               + S    V   F R+ Y +A++     
Sbjct: 233 EHEDNVKLQEDLVYYIVQYVLNNVYDDLVAIGRDVSKLEKVQKPFPRMTYTEAVKFLQKQ 292

Query: 290 KPDLRNPIIM 299
             D++     
Sbjct: 293 GFDIKWGDDF 302



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 49/142 (34%), Gaps = 7/142 (4%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--L 484
           +    F+  W  DF   E     K+ D        P+         D  + +    D  L
Sbjct: 289 LQKQGFDIKWGDDFGGDEETVLAKQFDSPLFVTHYPRQAKAFYMQPDPNNPEVVLCDDLL 348

Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
              G+ EI     R H  ++M++      +       ++       + G  PH G   G+
Sbjct: 349 APEGYGEIIGASQRIHDYDLMVERLKENNLPV----EKYDWYLDLRKFGSVPHSGFGLGV 404

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R +  +   +++RE   F  +
Sbjct: 405 ERTIAWIASLEHIREAIPFART 426


>gi|104773527|ref|YP_618507.1| lysyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116513522|ref|YP_812428.1| lysyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|103422608|emb|CAI97211.1| Lysyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116092837|gb|ABJ57990.1| Lysyl-tRNA synthetase (class II) [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 501

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 78/419 (18%), Positives = 153/419 (36%), Gaps = 33/419 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +++G +   R  G + F D+ D  G  Q+    D    E  +  +   +    G  +   
Sbjct: 61  KIAGRMLAKRGKGKVGFADLYDRSGKIQIYVRKDMVGEENYQIFKKADL----GDFLGVE 116

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH-K 140
            E       +G++ + AQ +  LS A   PLP            ++ R+LDL  +    +
Sbjct: 117 GEVF--KTDSGELSVRAQHVTFLSKALR-PLPDKYHGLKDVESIYRQRYLDLITNHESYQ 173

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
             V RT+II ++R  +  ++F+E  TP+L        AR F+        + Y +  A +
Sbjct: 174 RFVNRTKIIQAIRDYLNGQDFLEVETPVLHNIPGGAEARPFITHHNALDINLY-MRIALE 232

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+    +R ++I   FR+E       P EF +L+   ++ +  D+++  E ++R 
Sbjct: 233 LPLKRLIVGDMERVYEIGRVFRNEGMDLKHNP-EFTELETYAAYYDFHDVMDEAEGIIRA 291

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
             +                 D  I   GTD  DL  P    ++ +         F + ++
Sbjct: 292 AAKVV-------------SEDGKINYQGTDL-DLGKPFRRVHMVDLIKELTGVDFWQPMT 337

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
           +    +V A               +N +    G+  +    +     G+   + P+AK  
Sbjct: 338 LEEARKVAAEHHVEVEPYWQVGHIINAFFEKFGEKTIVDPTFVY---GHPVEVSPLAKKN 394

Query: 380 NIVNTEAIRVR---LDMQDGDSCFFIAG--DPLKFCSFAADARNHIAQELGIINCNCFE 433
                   R     +  + G++   +    D  +        R+    E  II+ +   
Sbjct: 395 ADDPRFTDRFEIFIMGNEYGNAFSELNDPLDQRERFEAQMAERDAGNDEADIIDEDYLR 453



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 63/349 (18%), Positives = 118/349 (33%), Gaps = 28/349 (8%)

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGV-FEEF-----SNGNTVSNNFLRICYDDA 282
           R        +    FV +  I+  + + L G  F E       N    +     I + +A
Sbjct: 161 RYLDLITNHESYQRFVNRTKIIQAIRDYLNGQDFLEVETPVLHNIPGGAEARPFITHHNA 220

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +      +  L  P+    V +     E     +   ++  +       +       F D
Sbjct: 221 LDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNEGMDLKHNPEFTELETYAAYYDFHD 280

Query: 343 RMNEWARSQGQPGLAYIFWRL-DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
            M+E        G+     ++  E G +   G        ++      R+ M   D    
Sbjct: 281 VMDE------AEGIIRAAAKVVSEDGKINYQG------TDLDLGKPFRRVHMV--DLIKE 326

Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
           + G          +AR  +A E  +     ++   I++  F+E   E+  +D        
Sbjct: 327 LTGVDFWQPMTLEEAR-KVAAEHHVEVEPYWQVGHIINA-FFEKFGEKTIVDPTFVYGHP 384

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
            +    + K  D       ++++   G E  +     +      + F      ++   + 
Sbjct: 385 VEVSPLAKKNAD-DPRFTDRFEIFIMGNEYGNAFSELNDPLDQRERFEAQMAERDAGNDE 443

Query: 522 FG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                    RA + GMPP GG+  GIDR+VMLL  A ++R+V LFP  +
Sbjct: 444 ADIIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTNAASIRDVLLFPTMR 492


>gi|239906653|ref|YP_002953394.1| asparaginyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239796519|dbj|BAH75508.1| asparaginyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 462

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 66/360 (18%), Positives = 128/360 (35%), Gaps = 48/360 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC 58
           M   RT     L        +R+ GWV   R   G  FL++ D   +   QV+ +  +  
Sbjct: 1   MSIRRTTVKAALESPSPCPEIRVMGWVRTRRDAKGFSFLELNDGSCLGNLQVIIDDTAEG 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            ++ K++     + + G +++   +         + E+ A  + +L  A+    P+  +R
Sbjct: 61  ADLVKALGVGASVAVTGELVASPGKG-------QRYEVRAASVSLLGAADPETYPLQKKR 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R     L  R +     +  R  + + +      E F    TP++T S  EGA 
Sbjct: 114 HSDEFLR-TIAHLRPRTNKYGAMLRIRAALAHGIHDYFAKEGFALVHTPVITGSDCEGAG 172

Query: 179 DFLVPSRVNQG------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
           +    + +                F+   A+     Q     +A    R +   P FR E
Sbjct: 173 EMFRVTTLGPEAAALPVAERLSQDFFGKEAMLTVSGQLSAEPLACALGRVYTFGPTFRAE 232

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------ 271
              + R   EF+ L+ EM+F + +D +N  E+++  +                       
Sbjct: 233 HSDTSRHAAEFWMLEPEMAFADLEDNMNLAESLVTHLVRLVLAECAEDFGLFAKFVDPTL 292

Query: 272 ---------NNFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSV 320
                      F+R+ Y +A+    + K   + P+       +EH  +     F + + V
Sbjct: 293 PATLENLLAEPFVRLPYVEAVDILTSCKKAFQYPVAFGADLQSEHERYLAEEHFKRPVIV 352



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 63/202 (31%), Gaps = 30/202 (14%)

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG---- 425
              G  AK ++      +   L        +  A D L  C  A         +L     
Sbjct: 279 EDFGLFAKFVDPTLPATLENLLAEPFVRLPYVEAVDILTSCKKAFQYPVAFGADLQSEHE 338

Query: 426 --IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             +   +      + D+P        K I      F M Q        ND          
Sbjct: 339 RYLAEEHFKRPVIVYDYP--------KDIKA----FYMRQ--------NDDGKTVGAMDV 378

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    E+  G  R    + +    + +G+        +       + G  PH G   G 
Sbjct: 379 LVPGIGELVGGSAREERLDRLEARIAELGLPL----EAYWWYLDTRRFGTVPHAGFGLGF 434

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R+VML+ G  N+R+V  FP +
Sbjct: 435 ERLVMLVTGVTNIRDVMAFPRT 456


>gi|110637161|ref|YP_677368.1| lysyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|110279842|gb|ABG58028.1| lysine--tRNA ligase [Cytophaga hutchinsonii ATCC 33406]
          Length = 575

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/361 (18%), Positives = 128/361 (35%), Gaps = 34/361 (9%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H   +   +D    + ++G V   R  G   F++I+D  G  Q     D  C +  K+  
Sbjct: 40  HQNYEKRKTDY-KNISIAGRVMSRRIMGNASFVEIQDASGRIQAYFRRDDLCPDEDKTQY 98

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------- 119
           +     + G+              TG+I +     +IL+ A           +       
Sbjct: 99  NTVFKKLVGIGDIIGIYGYVFTTQTGEITIHVTSFKILTKALRPLPMPKEAVDENGEKKI 158

Query: 120 ----YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                    R++ R++DL  +   ++  +KRTR++N+MR  +  + ++E  TPIL     
Sbjct: 159 FDAFTDPEQRYRMRYVDLIVNPHVRDAFIKRTRLVNTMREYLNNKGYLEVETPILQPLYG 218

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F           Y L  A + Y + L+  GFD  ++ +  FR+ +  S     E
Sbjct: 219 GAAARPFKTHHNTLDMPLY-LRIANELYLKRLIVGGFDGVYEFSKDFRN-EGMSRFHNPE 276

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F Q+++ +++ +   +++ +E ++  V         V      I +    +R+       
Sbjct: 277 FTQVELYVAYKDYYWMMDLVEEMVEKVAVALHGTTEVQVGPHTISFQRPWKRF------- 329

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
                M    EH+         +   +    +   +      G     D +       G 
Sbjct: 330 ----TMFEAIEHYTGINIGEMDEA-QLRATCKSLNVDVDDSMGKGKLIDEI------FGA 378

Query: 354 P 354
            
Sbjct: 379 K 379



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPP 535
            +++ +CNG EI +     +      Q F       +  ++          RA + GMPP
Sbjct: 412 ERFEAICNGKEICNSFSELNDPIDQRQRFEEQLELGKRGDSESMVLDEDFLRALEYGMPP 471

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             G+  GIDR+ M++  + ++++V  FP  +
Sbjct: 472 TAGLGIGIDRLAMVMTNSASIQDVLFFPQMR 502


>gi|197121548|ref|YP_002133499.1| lysyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|220916312|ref|YP_002491616.1| lysyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|238689875|sp|B4UGU5|SYK_ANASK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|254782468|sp|B8JFW2|SYK_ANAD2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|196171397|gb|ACG72370.1| lysyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|219954166|gb|ACL64550.1| lysyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 513

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 13/249 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            L+G V  VR  G   FL +RD     QV    D    +  +  +   +  I G      
Sbjct: 64  SLAGRVLAVRSFGKAAFLRVRDRSAELQVWVKKDRVGEQAFEVFKLLDIGDIVG------ 117

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHK 140
           AE       TG++ L A+   IL+ A   PLP           R++ R++DL     + +
Sbjct: 118 AEGPATRTKTGELTLEARTFTILTKA-TRPLPEKWHGLTDVEQRYRQRYVDLVVTPGVRE 176

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA---SSPEGARDFLVPSRVNQGSFYALPQA 197
             VKR RI++ +R  + A  ++E  TP L     +    AR F             L  A
Sbjct: 177 AFVKRARIVSGIRRFLDARGYLEVETPTLHKPEEAGGAAARPFETHHNALDLDL-KLRIA 235

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G DR ++I   +R+E     R   EF  ++   ++   +D++   E ++
Sbjct: 236 TELHLKRLVVGGLDRVYEIGRIWRNEGID-RRHNPEFTSIEFYQAYATHEDLMRLTEELM 294

Query: 258 RGVFEEFSN 266
             +  E + 
Sbjct: 295 HRLAVEVTG 303



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 61/186 (32%), Gaps = 30/186 (16%)

Query: 384 TEAIRVRLDMQDGDS--CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFP 441
                 R   ++ DS   + +     K    A      I  E  +         +++DFP
Sbjct: 346 LAEALSRAAARENDSEDAWKLEQAAKKTPGEAVALAFEIFGEPQLPKD---RPAFVVDFP 402

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
                          +P +  +     L           +++L   G E+A+     +  
Sbjct: 403 L------------ETSPLSRRRDADPRLVD---------RFELFAAGMELANAFSELNDP 441

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F     +K   +           RA + GMPP  G   GIDR+ ML   + ++R
Sbjct: 442 ADQRARFEAQMRAKAAGDEEAMPYDEDFVRALEHGMPPTAGEGIGIDRLAMLFTDSASIR 501

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 502 DVILFP 507


>gi|262365024|gb|ACY61581.1| asparaginyl-tRNA synthetase [Yersinia pestis D182038]
          Length = 466

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 139/424 (32%), Gaps = 50/424 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSE 68
           G + VGS V + GWV   R    GI F+ + D      + A  ++      +    + + 
Sbjct: 12  GRAAVGSEVTVRGWVRTRRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTTG 71

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G V++   E  +        E+ A  I ++   ++        + +      + 
Sbjct: 72  CSVEVTGTVVASPGEGQS-------FEIQATAINVVGWVDDPDTYPMAAKRHSIEYLREV 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R + +      R  +  ++        +   STP++TAS  EGA +    S ++ 
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 189 --------------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q      A    + +   P FR E+  + R  
Sbjct: 185 ENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHL 244

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTD 289
            EF+ ++ E++F   DD+    E +L+ VF+   N       F   R+  D   R     
Sbjct: 245 AEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNARADDMKFFAERVDKDAVDRLPRFV 304

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKI------------LSVNPGYEVWAIPAKGGGGN 337
             D    +   +  E  + S  +  + +                  ++   +        
Sbjct: 305 TSDFAQ-VDYTDAIEILLASGQKFENDVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI 363

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           +AF  RMNE        G       +   G    +G   +   +   +A    + +   D
Sbjct: 364 KAFYMRMNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKED 416

Query: 398 SCFF 401
             ++
Sbjct: 417 YWWY 420



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    +V+   
Sbjct: 347 EKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDAR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + +G++K      +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 407 LAEMGLNK----EDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRTPR 462


>gi|298377245|ref|ZP_06987198.1| lysine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298265659|gb|EFI07319.1| lysine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 576

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 64/332 (19%), Positives = 131/332 (39%), Gaps = 22/332 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR++G +   R  G   F++++D  G  QV  + D  C +  K   +     +  +    
Sbjct: 55  VRIAGRIMSRRIMGKASFMELQDSEGRIQVYISRDDICPDENKDTYNVVFKKLLDIGDFV 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFLDLR 134
             +        G+I + AQ++ +LS +      V  +            +R++ R++DL 
Sbjct: 115 GIKGFVFRTQMGEISVHAQELTVLSKSLRPLPVVKYKDGVAYDGFNDPELRYRQRYVDLV 174

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            +  +    +KR  II +MR  +    + E  TPIL + +    AR F+          Y
Sbjct: 175 VNEGVKDIFMKRAAIIKTMRTALDEAGYTEVETPILQSIAGGASARPFITHHNSLDIDLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + +++ 
Sbjct: 235 -LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMELYVQYKDYNWMMSF 292

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            E +L  +    +  +  + +   I +    R         R PI+     +     E +
Sbjct: 293 TEKLLERICIAVNGTSESTIDGKTISFKAPFR---------RLPILEAIKEKTGYDLEGK 343

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
              +I ++    ++      G G      D +
Sbjct: 344 TEDEIRAICKELKMEIDDTMGKG---KLIDEI 372



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 81/236 (34%), Gaps = 40/236 (16%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W  S  +  L  I   ++ +      G             I   +  + G D       +
Sbjct: 288 WMMSFTEKLLERICIAVNGTSESTIDGKTISFKAPFRRLPILEAIKEKTGYDLEGKTEDE 347

Query: 406 PLKFCSFAADARNHIAQELG---IINCNCFEFC--------WIMDFPFYEWNEEEKKIDF 454
               C    + +  I   +G   +I+    EFC        +I+D+P             
Sbjct: 348 IRAICK---ELKMEIDDTMGKGKLIDEIFGEFCEGTFIQPTFIIDYP------------V 392

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             +P T        L           +++L+ NG E+A+     +      + F      
Sbjct: 393 EMSPLTKMHRSKPGL---------TERFELMVNGKELANAYSELNDPIDQEERFKEQLRL 443

Query: 515 KEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            E  ++          RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP  +
Sbjct: 444 SEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLVMLMTGQTTIQEVLLFPQMR 499


>gi|261492017|ref|ZP_05988592.1| asparagine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494570|ref|ZP_05991052.1| asparagine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261309761|gb|EEY10982.1| asparagine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312300|gb|EEY13428.1| asparagine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 467

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 75/403 (18%), Positives = 132/403 (32%), Gaps = 54/403 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSA 57
           M ++ T S    G   VG    + GWV   R    G+ FL + D       Q + N D  
Sbjct: 1   MSKFPTVSEILSGKIAVGEEATVRGWVRTRRDSKAGLSFLSVYDGSCFDPIQAIINNDLP 60

Query: 58  CFE-IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
            +      + +   + + G V+   AE          +EL A K+E+L   E+       
Sbjct: 61  NYNAEVLRLTAGCSVVVTGKVVESPAEGQA-------VELQASKVEVLGWVEDPDTYPMA 113

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + +      +   L  R + +      R  +  ++      + F   +TP++TAS  EG
Sbjct: 114 AKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPVITASDTEG 173

Query: 177 ARDFLVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPC 219
           A +    S ++                 F+          Q      A    + +   P 
Sbjct: 174 AGEMFRVSTLDLENLPRGENGKVDFNQDFFGKESFLTVSGQLNAETYACALSKVYTFGPT 233

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------- 266
           FR E+  + R   EF+ ++ E++F + +D     E++L+ VF+                 
Sbjct: 234 FRAENSNTTRHLAEFWMMEPEVAFADLNDNAKLAEDMLKYVFKAVLAERKDDMEFFVKHV 293

Query: 267 --------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
                    N +++ F ++ Y DAI        +   P+         + SE   F    
Sbjct: 294 DKEAISRLENFINSPFAQVDYTDAIEILLKSGKEFEFPVSWG----IDLSSEHERFLAEE 349

Query: 319 SVNPGYEVWAIPAKGGGGNRAFCDR-MNEWARSQGQPGLAYIF 360
                  V + P           D      A     PG+  I 
Sbjct: 350 HFKSPVVVKSYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    EV+ Q  + +G++       +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEVLDQRMNEMGLNP----EDYWWYRDLRK 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 427 YGTVPHSGFGLGFERLIVYVTGLQNIRDVIPFPRAPR 463


>gi|237836481|ref|XP_002367538.1| aspartyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211965202|gb|EEB00398.1| aspartyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 773

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 76/355 (21%), Positives = 135/355 (38%), Gaps = 25/355 (7%)

Query: 3   RYRTHS----CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANP 54
           R RT+        L  + VG  V + G +   R  G + FL +R+      G+       
Sbjct: 309 RMRTNREWIPVDQLR-NHVGKTVWVRGRIQESRGKGSVGFLMLRERQETVQGVLDAKRGN 367

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                +   S+  E V+ + G V+    E  + +     +EL   KI  +S A +     
Sbjct: 368 TKDMIKWTMSLPLESVVDLQGTVVEPEVEIQSTSQK--GVELLVTKIFCVSKAAQELPFQ 425

Query: 115 FGEREYPES-----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
             +   PE             R   R LDLR          ++  +   R  +++ NF+E
Sbjct: 426 LRDAMRPEDGSEGGIRVNMDTRLDNRILDLRTPVNQAIFRIQSETLQLFREFLLSRNFVE 485

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             +P L   + EG          N+ +   L Q+PQ YKQ+ M + F+R F+I P FR E
Sbjct: 486 LHSPKLIGGASEGGASCFTLKYFNRDA--CLAQSPQLYKQMAMCADFERVFEIGPVFRAE 543

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           +  + R   EF  LD+EM+F E   ++L+ ++++ + +F+  S       +     +   
Sbjct: 544 NSNTHRHLCEFTGLDLEMTFKEHYSEVLDLLDDLFKFIFKGLSERCKKEIDLFHQQHPAE 603

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
              +  + P L     +  + E    +     S+        ++     K     
Sbjct: 604 PFTWIEETPRLSFEEGVQMLREAGCPNIPEDLSEFDLSTEQEKMLGRLVKEKYHT 658



 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 59/157 (37%), Gaps = 22/157 (14%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           D      + LG +    +      DF          +      PF               
Sbjct: 639 DLSTEQEKMLGRLVKEKYH----TDFYML------LQYPLKVRPFYTMPD--------PH 680

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             + +  YD      EI SG  R H ++++ Q     G+    ++        +F+ G  
Sbjct: 681 NKMYSNSYDFFMRNEEITSGAQRVHDADLLTQRCLECGVPPSSIQT----YIDSFRLGTA 736

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PHGG   G++R+VML LGAKN+R+VSLFP        
Sbjct: 737 PHGGAGIGLERVVMLFLGAKNIRQVSLFPRDPKRLTP 773


>gi|74141887|dbj|BAE41011.1| unnamed protein product [Mus musculus]
          Length = 501

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 90/379 (23%), Positives = 151/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL V      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTVQKADDVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +   PE    
Sbjct: 110 KESIIDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAIRPEVEGE 167

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 168 EDGRATVNQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA 227

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 228 SEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 285

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNFL-----------R 276
              LD+EM+F        ++I +T+  + +G+ E F +   TVS  F            R
Sbjct: 286 CVGLDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR 345

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    +  + +    ++F V  K  L+V P Y + 
Sbjct: 346 LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFYTMP 405

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 406 DPRNPKQSNSYDMFMRGEE 424



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF             D  + K +  YD+   G EI SG  R H  +++ +   
Sbjct: 393 KYPLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERAL 443

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           + GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP      
Sbjct: 444 HHGIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRL 499

Query: 570 DL 571
             
Sbjct: 500 TP 501


>gi|237722500|ref|ZP_04552981.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229448310|gb|EEO54101.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 447

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 67/340 (19%), Positives = 121/340 (35%), Gaps = 33/340 (9%)

Query: 11  DLGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           DL  SD+ G  V + GWV   R    I F+ + D   +  +    +   FE     ++  
Sbjct: 7   DLLKSDIYGIDVYVRGWVRTHRQSKNISFIALNDGSTVHNLQIVIEHVKFE-----KNML 61

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
                G  +    + I +     Q+E+ A  IE+  +A+    P+  ++E+      +  
Sbjct: 62  KTITTGSSIGIKGKFIRSAGGKQQVEVIAGDIEVYGIADPQEYPLQ-KKEHSLEYLREIA 120

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR +        R  +  ++        F   +TPI+T S  EGA +        + 
Sbjct: 121 HLRLRTNIFGAIFRMRHNMAFAIHRYFNERGFFYFNTPIITTSDSEGAGELFEVKTELKD 180

Query: 190 SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+   A      Q +  L A      +  +P FR E+  + R   EF+ ++ E++F + 
Sbjct: 181 DFFGSPANLTVSGQLEGELGALALGAIYTFSPTFRAENSNTFRHLSEFWMIEPEVAFNDI 240

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRICYDDAIRR 285
           +D ++  E+ L+ +                                N F+R+ Y  AI  
Sbjct: 241 NDNMDLAEDFLKYLIRYALENCESDLAFLNDNVDNGLMDKLHFVANNEFMRLPYSKAIEI 300

Query: 286 YGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
                     P+   +    EH  H     F + + V   
Sbjct: 301 LQESGRQFDYPVKPGIDLCAEHERHLVEEYFRRPVIVTDY 340



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++         + D+P     +E K        F M Q         D  +++A  
Sbjct: 322 HERHLVEEYFRRPVIVTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 362

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R      +LQ    + ++      +      + + G  PH G   
Sbjct: 363 V-LFPKIGEIIGGSEREADYTKLLQRMKELNMNT----EKLWWYLESRKFGTVPHSGFGL 417

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G  N+R+V  FP +  
Sbjct: 418 GFERLMLFITGMTNIRDVIPFPRTPR 443


>gi|221505309|gb|EEE30963.1| aspartyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 763

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 76/355 (21%), Positives = 135/355 (38%), Gaps = 25/355 (7%)

Query: 3   RYRTHS----CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANP 54
           R RT+        L  + VG  V + G +   R  G + FL +R+      G+       
Sbjct: 299 RMRTNREWIPVDQLR-NHVGKTVWVRGRIQESRGKGSVGFLMLRERQETVQGVLDAKRGN 357

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                +   S+  E V+ + G V+    E  + +     +EL   KI  +S A +     
Sbjct: 358 TKDMIKWTMSLPLESVVDLQGTVVEPEVEIQSTSQK--GVELLVTKIFCVSKAAQELPFQ 415

Query: 115 FGEREYPES-----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
             +   PE             R   R LDLR          ++  +   R  +++ NF+E
Sbjct: 416 LRDAMRPEDGSEGGIRVNMDTRLDNRILDLRTPVNQAIFRIQSETLQLFREFLLSRNFVE 475

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             +P L   + EG          N+ +   L Q+PQ YKQ+ M + F+R F+I P FR E
Sbjct: 476 LHSPKLIGGASEGGASCFTLKYFNRDA--CLAQSPQLYKQMAMCADFERVFEIGPVFRAE 533

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           +  + R   EF  LD+EM+F E   ++L+ ++++ + +F+  S       +     +   
Sbjct: 534 NSNTHRHLCEFTGLDLEMTFKEHYSEVLDLLDDLFKFIFKGLSERCKKEIDLFHQQHPAE 593

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
              +  + P L     +  + E    +     S+        ++     K     
Sbjct: 594 PFTWIEETPRLSFEEGVQMLREAGCPNIPEDLSEFDLSTEQEKMLGRLVKEKYHT 648



 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 59/157 (37%), Gaps = 22/157 (14%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           D      + LG +    +      DF          +      PF               
Sbjct: 629 DLSTEQEKMLGRLVKEKYH----TDFYML------LQYPLKVRPFYTMPD--------PH 670

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             + +  YD      EI SG  R H ++++ Q     G+    ++        +F+ G  
Sbjct: 671 NKMYSNSYDFFMRNEEITSGAQRVHDADLLTQRCLECGVPPSSIQT----YIDSFRLGTA 726

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PHGG   G++R+VML LGAKN+R+VSLFP        
Sbjct: 727 PHGGAGIGLERVVMLFLGAKNIRQVSLFPRDPKRLTP 763


>gi|329962609|ref|ZP_08300557.1| asparagine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328529640|gb|EGF56538.1| asparagine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 467

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 58/295 (19%), Positives = 106/295 (35%), Gaps = 29/295 (9%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L   D G+ V + GWV   R    + F+ + D   I  V    D   F
Sbjct: 1   MEKISRTKIVDLLKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQVVVDLGNF 60

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+ K + +   L ++G++         A       E+ A++IE+L   +        +
Sbjct: 61  DEEMLKDITTGACLSVNGILTESVGSGQKA-------EVQAREIEVLGTCDNTYPLQ--K 111

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           + +      +   L  R +T       R  +  ++        F    TPI+T S  EGA
Sbjct: 112 KGHSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHDRGFFYFHTPIITGSDCEGA 171

Query: 178 RDFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
                 +  N                 F+    +     Q +  L A+     +   P F
Sbjct: 172 GQMFQVTTKNLYDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F +  D ++  E+ ++   +   +       FL
Sbjct: 232 RAENSNTPRHLAEFWMVEPEVAFNDITDNMDLAEDFIKYCVQWALDNCADDVKFL 286



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P     +E K        F M Q         D  +++A  
Sbjct: 342 HERYLVEEHFKRPVILTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 382

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R      ++     + I  + +           + G  PH G   
Sbjct: 383 V-LFPKIGEIIGGSEREADYGKLMTRIEELHIPMKDMW----WYLDTRKFGTCPHSGFGL 437

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G  N+R+V  FP +  
Sbjct: 438 GFERLLLFVTGMTNIRDVIPFPRTPR 463


>gi|22126636|ref|NP_670059.1| asparaginyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45441008|ref|NP_992547.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51595776|ref|YP_069967.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108806704|ref|YP_650620.1| asparaginyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108812726|ref|YP_648493.1| asparaginyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145599555|ref|YP_001163631.1| asparaginyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149366669|ref|ZP_01888703.1| asparaginyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153950923|ref|YP_001401523.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162419705|ref|YP_001606453.1| asparaginyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165924584|ref|ZP_02220416.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938931|ref|ZP_02227484.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166211575|ref|ZP_02237610.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167400005|ref|ZP_02305523.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419723|ref|ZP_02311476.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424283|ref|ZP_02316036.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170024873|ref|YP_001721378.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186894855|ref|YP_001871967.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218928560|ref|YP_002346435.1| asparaginyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229841386|ref|ZP_04461545.1| asparaginyl tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843491|ref|ZP_04463637.1| asparaginyl tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229903129|ref|ZP_04518242.1| asparaginyl tRNA synthetase [Yersinia pestis Nepal516]
 gi|270486924|ref|ZP_06203998.1| asparagine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294503399|ref|YP_003567461.1| asparaginyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|20139880|sp|P58697|SYN_YERPE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|59798513|sp|Q66CG7|SYN_YERPS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123072925|sp|Q1CA47|SYN_YERPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123073284|sp|Q1CGI7|SYN_YERPN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166232744|sp|A4TMZ6|SYN_YERPP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166980091|sp|A7FJU5|SYN_YERP3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|21959647|gb|AAM86310.1|AE013878_7 asparagine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45435867|gb|AAS61424.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51589058|emb|CAH20676.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108776374|gb|ABG18893.1| asparaginyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108778617|gb|ABG12675.1| asparaginyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115347171|emb|CAL20064.1| asparaginyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145211251|gb|ABP40658.1| asparaginyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149291043|gb|EDM41118.1| asparaginyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152962418|gb|ABS49879.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162352520|gb|ABX86468.1| asparaginyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165913078|gb|EDR31702.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165923644|gb|EDR40776.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|166207346|gb|EDR51826.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962464|gb|EDR58485.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050713|gb|EDR62121.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057132|gb|EDR66895.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169751407|gb|ACA68925.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186697881|gb|ACC88510.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|229678899|gb|EEO75002.1| asparaginyl tRNA synthetase [Yersinia pestis Nepal516]
 gi|229689838|gb|EEO81899.1| asparaginyl tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697752|gb|EEO87799.1| asparaginyl tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|262361441|gb|ACY58162.1| asparaginyl-tRNA synthetase [Yersinia pestis D106004]
 gi|270335428|gb|EFA46205.1| asparagine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294353858|gb|ADE64199.1| asparaginyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320015724|gb|ADV99295.1| asparaginyl tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 466

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 139/424 (32%), Gaps = 50/424 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSE 68
           G + VGS V + GWV   R    GI F+ + D      + A  ++      +    + + 
Sbjct: 12  GRAAVGSEVTVRGWVRTRRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTTG 71

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G V++   E  +        E+ A  I ++   ++        + +      + 
Sbjct: 72  CSVEVTGTVVASPGEGQS-------FEIQATAINVVGWVDDPDTYPMAAKRHSIEYLREV 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R + +      R  +  ++        +   STP++TAS  EGA +    S ++ 
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 189 --------------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q      A    + +   P FR E+  + R  
Sbjct: 185 ENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHL 244

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTD 289
            EF+ ++ E++F   DD+    E +L+ VF+   N       F   R+  D   R     
Sbjct: 245 AEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERVDKDAVDRLQRFV 304

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKI------------LSVNPGYEVWAIPAKGGGGN 337
             D    +   +  E  + S  +  + +                  ++   +        
Sbjct: 305 TSDFAQ-VDYTDAIEILLASGQKFENDVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI 363

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           +AF  RMNE        G       +   G    +G   +   +   +A    + +   D
Sbjct: 364 KAFYMRMNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKED 416

Query: 398 SCFF 401
             ++
Sbjct: 417 YWWY 420



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    +V+   
Sbjct: 347 EKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDAR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + +G++K      +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 407 LAEMGLNK----EDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRTPR 462


>gi|221484039|gb|EEE22343.1| aspartyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 763

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 76/355 (21%), Positives = 135/355 (38%), Gaps = 25/355 (7%)

Query: 3   RYRTHS----CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANP 54
           R RT+        L  + VG  V + G +   R  G + FL +R+      G+       
Sbjct: 299 RMRTNREWIPVDQLR-NHVGKTVWVRGRIQESRGKGSVGFLMLRERQETVQGVLDAKRGN 357

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                +   S+  E V+ + G V+    E  + +     +EL   KI  +S A +     
Sbjct: 358 TKDMIKWTMSLPLESVVDLQGTVVEPEVEIQSTSQK--GVELLVTKIFCVSKAAQELPFQ 415

Query: 115 FGEREYPES-----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
             +   PE             R   R LDLR          ++  +   R  +++ NF+E
Sbjct: 416 LRDAMRPEDGSEGGIRVNMDTRLDNRILDLRTPVNQAIFRIQSETLQLFREFLLSRNFVE 475

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             +P L   + EG          N+ +   L Q+PQ YKQ+ M + F+R F+I P FR E
Sbjct: 476 LHSPKLIGGASEGGASCFTLKYFNRDA--CLAQSPQLYKQMAMCADFERVFEIGPVFRAE 533

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           +  + R   EF  LD+EM+F E   ++L+ ++++ + +F+  S       +     +   
Sbjct: 534 NSNTHRHLCEFTGLDLEMTFKEHYSEVLDLLDDLFKFIFKGLSERCKKEIDLFHQQHPAE 593

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
              +  + P L     +  + E    +     S+        ++     K     
Sbjct: 594 PFTWIEETPRLSFEEGVQMLREAGCPNIPEDLSEFDLSTEQEKMLGRLVKEKYHT 648



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 59/157 (37%), Gaps = 22/157 (14%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           D      + LG +    +      DF          +      PF               
Sbjct: 629 DLSTEQEKMLGRLVKEKYH----TDFYML------LQYPLKVRPFYTMPD--------PH 670

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             + +  YD      EI SG  R H ++++ Q     G+    ++        +F+ G  
Sbjct: 671 NKMYSNSYDFFMRNEEITSGAQRVHDADLLTQRCLECGVPPSSIQT----YIDSFRLGTA 726

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PHGG   G++R+VML LGAKN+R+VSLFP        
Sbjct: 727 PHGGAGIGLERVVMLFLGAKNIRQVSLFPRDPKRLTP 763


>gi|262197984|ref|YP_003269193.1| asparaginyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262081331|gb|ACY17300.1| asparaginyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 466

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 71/396 (17%), Positives = 120/396 (30%), Gaps = 50/396 (12%)

Query: 7   HSCGDL--GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK 63
           H   ++  G  +VG+ V + GWV   R    G+ FL + D      +     S   +   
Sbjct: 4   HRIAEIFSGAVEVGTPVVIEGWVRTRRDSKAGLSFLHVSDGSCFDPLQVVAPSELADYED 63

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V         G  +    E   +      +E+ A+ IE++   +         + +   
Sbjct: 64  VVLKLS----TGCAVRVRGELKASQGKGQSVEVQAESIEVVGWVDSPETYPMQPKRHSME 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
              +   L  R + +      R  +  ++        F    TPI+TAS  EGA +    
Sbjct: 120 YLREVAHLRPRTNIIGAVTRVRHSLSQAIHRFFHEHGFFWIHTPIITASDAEGAGEMFRV 179

Query: 184 SRVNQGSFYALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPR 226
           S ++  +    P+    Y +                         R +   P FR E+  
Sbjct: 180 STLDMANLPRTPEGGVDYDKDFFGREAHLTVSGQLNVETYCLAMSRVYTFGPTFRAENSN 239

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-------------- 272
           + R   EF+ ++ E++F +  D +   E  L+ +F E                       
Sbjct: 240 TRRHLAEFWMIEPEIAFADLGDDITLAEQFLKYIFAEVLRERADDMAFFDKWVDKGCIER 299

Query: 273 -------NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                   F R+ Y DA+R     K     P+         + SE   F     V     
Sbjct: 300 TEKLLASPFTRMDYSDAVRELEKAKKKFEFPVSWG----ADLQSEHERFLTEKVVGGPVA 355

Query: 326 VWAIPAKGGGGNRAFCDR-MNEWARSQGQPGLAYIF 360
           V   P           D      A     PG+  I 
Sbjct: 356 VVNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 6/100 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    EV+ +  + VG+        +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEVLDKRIAEVGLEP----EPYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G  PH G   G +R +  L G  N+R+V  FP +    D
Sbjct: 426 YGTVPHAGFGLGFERAIQYLTGVDNIRDVIPFPRAPRQAD 465


>gi|319953566|ref|YP_004164833.1| asparaginyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319422226|gb|ADV49335.1| Asparaginyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 477

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 111/290 (38%), Gaps = 27/290 (9%)

Query: 5   RTHSCGDLGVSDVG-SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           ++HS  +L  S++    V ++GWV   R +    F+ + D   I  +    D   F+ A 
Sbjct: 2   KSHSIKELLSSNLSLQEVTINGWVKTFRSNR---FIALNDGSTINNIQCVVDFENFDEA- 57

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
                      G  +  S   + +      +E+  +++ +L V++    P+  ++   E 
Sbjct: 58  ----LLKKVSTGAAVKISGTLVESQGRGQSVEIQVKELVVLGVSDPDTYPIQPKKHSLEF 113

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K   L +R +T    +  R+ +  ++        F    TPI+T S  EGA +    
Sbjct: 114 LREK-AHLRVRTNTFAAVMRVRSTLSFAVHRYFQNNGFYNVHTPIITGSDAEGAGEMFRV 172

Query: 184 SRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           S ++Q                F+          Q +    A    + +   P FR E+  
Sbjct: 173 STLDQKKPPLNDAGEIDFKQDFFGKETNLTVSGQLEAETYAMALGKVYTFGPTFRAENSN 232

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           + R   EF+ ++ E++F + D  ++  E+ ++ V             FL 
Sbjct: 233 TSRHLAEFWMIEPEVAFNDLDANMDLAEDFIKDVINYILEHCAEDLKFLE 282



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 14/118 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M          +D  +++A   D++  G  EI  G  R    +V+L+   
Sbjct: 369 DYPAKIKAFYMR-------LNDDGKTVRAM--DILFPGIGEIVGGSQREERLDVLLEKIK 419

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            +GI     E          + G   H G   G +R+V+   G  N+R+V  FP +  
Sbjct: 420 ELGID----EEELWWYLDLRKFGTAVHSGFGLGFERLVLFATGMGNIRDVIPFPRTPQ 473


>gi|237747767|ref|ZP_04578247.1| lysyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229379129|gb|EEO29220.1| lysyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 511

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 61/287 (21%), Positives = 116/287 (40%), Gaps = 25/287 (8%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGI-----TQVVANPDSACFEIAKSVRSEWVLCID 74
            V ++G +   R  G   F  ++D  G+      Q+  + D+   E   + +   +  I 
Sbjct: 69  EVCVAGRMMLKRVMGKASFATLQDASGLQANGRIQLFLSNDATGKEAHDAFKRYDIGDIL 128

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G      A        TG++ +   ++ +++ +   PLP        + ++++ R++DL 
Sbjct: 129 G------ATGTLFKTRTGELSVRVSEVRLITKSVR-PLPDKFHGLSDQELKYRQRYVDLI 181

Query: 135 R-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
             +   K    RT  I S+R  M    F+E  TP+L A      A+ F+          +
Sbjct: 182 MSEETRKTFKARTAAIASIRRFMGDNGFMEVETPMLHAIPGGAAAKPFITYHNALDMQMF 241

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++   ++V+   +++ 
Sbjct: 242 -MRIAPELYLKRLLVGGFERVFELNRNFRNEGV-SPRHNPEFTMMEFYAAYVDYKWLMDF 299

Query: 253 MENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRYGTDK 290
            E V+R    +                S  F R    +AI +Y    
Sbjct: 300 TETVIRQAVVDTYGTPVITYQGKELDFSKPFRRFTILEAISKYAPHY 346



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 107/341 (31%), Gaps = 50/341 (14%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  +  +     +L  +      G   +  F+       ++ +    P+L    ++   
Sbjct: 203 FMGDNGFMEVETPMLHAI-----PGGAAAKPFITYHNALDMQMFMRIAPELYLKRLLVGG 257

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE------WARSQGQPGL 356
            E          ++ +S     E   +       +  +     E         + G P +
Sbjct: 258 FERVFELNRNFRNEGVSPRHNPEFTMMEFYAAYVDYKWLMDFTETVIRQAVVDTYGTPVI 317

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA--- 413
            Y      +   +    P  +   +           ++  +   F+  +  KF       
Sbjct: 318 TY------QGKELDFSKPFRRFTILEAISKYAPHYTLEQLNDADFLRAELKKFGVKLLPT 371

Query: 414 ---ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
                 +  + +E        +E  +I+D+P                            +
Sbjct: 372 AGVGALQLALFEE--TAEAKLWEPTYIIDYP---------------------VEVSPLAR 408

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLY 526
            +D       +++L   G EIA+G    +  E     F     +K+  +           
Sbjct: 409 ASDTREGITERFELFMVGREIANGFSELNDPEDQSARFMKQVEAKDAGDEEAMYYDSDYI 468

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           RA + GMPP GG   GIDR+VMLL  + N+R+V LFP  + 
Sbjct: 469 RALEYGMPPAGGCGIGIDRLVMLLTDSPNIRDVILFPHMRR 509


>gi|255037962|ref|YP_003088583.1| asparaginyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254950718|gb|ACT95418.1| asparaginyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 479

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 56/282 (19%), Positives = 106/282 (37%), Gaps = 23/282 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L  +     V + GWV   R     IF+ + D   I  + A  +   F     +      
Sbjct: 10  LQTAPENQSVVVKGWVRTKRESKNAIFIALNDGSTINNIQAVAEPGQFSAELLLT----- 64

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  + + I +      +E+    IE+   A+    P+  ++   E +R +   L
Sbjct: 65  VTTGSCLKVTGQLIASQGAGQTVEVKITDIEVYGTADPEEYPLQPKKHSLEFLR-EIAHL 123

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---- 187
             R +T    +  R  +  ++      + F    TP++TAS  EGA +    + ++    
Sbjct: 124 RPRTNTFSAILRIRHALAFAVHQYFNEKGFFYLHTPVITASDAEGAGEMFRVTTLDLNNL 183

Query: 188 ----------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                     +  F+   A      Q +  L A    + +   P FR E+  + R   EF
Sbjct: 184 PRTEEGAINFKEDFFGREANLTVSGQLEGELGAMALSKIYTFGPTFRAENSNTTRHLAEF 243

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           + ++ EM+F E +D ++  E+ ++ V            NFL+
Sbjct: 244 WMIEPEMAFFELEDNMDLAEDFVKKVITYALINCKDDLNFLQ 285



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 7/102 (6%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  +++A   D++  G  EI  G  R    E +L     +GI               
Sbjct: 383 LDEDGKTVRAM--DVLFPGIGEIIGGSQREESYEKLLGRVKEIGIDP----ENLWWYLET 436

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            + G  PH G   G +R+V  + G  N+R+V  FP      +
Sbjct: 437 RKFGTAPHSGFGLGFERLVQFVTGMGNIRDVIPFPRYPKSAE 478


>gi|300362398|ref|ZP_07058574.1| lysine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300353389|gb|EFJ69261.1| lysine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 513

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 68/363 (18%), Positives = 134/363 (36%), Gaps = 28/363 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +++G +   R  G + F D+ D  G  Q+    D    +  K  +   +    G  +   
Sbjct: 62  KIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDI----GDFLGID 117

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E +     TG++ + A  +  L+ A   PLP   +        ++ R+LDL  +     
Sbjct: 118 GEVM--KTDTGELTIRATHVTFLAKALR-PLPNKWDGLKDVEQIYRQRYLDLITNHESYM 174

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
               RT+II ++R  +  ++F+E  TP+L        AR F+          Y +  A +
Sbjct: 175 RFVHRTQIIQAIRNYLNNQDFLEVETPVLHNIPGGAEARPFITHHNALDIDLY-MRIALE 233

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+  G +R ++I   FR+E   +   P EF +L+   ++ +  D+++  E ++R 
Sbjct: 234 LPLKRLIVGGMERVYEIGRVFRNEGVDTRHNP-EFTELETYAAYWDFHDVMDEAEGIIRA 292

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
             +                 D  I   GTD  DL  P    ++ +         F K ++
Sbjct: 293 AAKVV-------------SLDGKINYQGTD-IDLGKPFRRVHMVDLIKEKTGVDFWKEMT 338

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
                ++                 +N +     +  +    +     G+   + P+AK  
Sbjct: 339 DEEAKKIAEEHGIHTEPFWKVGHVINAFFDEFCEKTIVDPTFVY---GHPVEISPLAKKN 395

Query: 380 NIV 382
              
Sbjct: 396 ADD 398



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 10/154 (6%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEE--KKIDFAHNPFTMPQGGMESLKGNDLLS 476
            IA+E GI     ++   +++  F E+ E+          +P  +    +     +D   
Sbjct: 344 KIAEEHGIHTEPFWKVGHVINAFFDEFCEKTIVDPTFVYGHPVEISP--LAKKNADDPR- 400

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCG 532
               ++++   G E  +     +        F      +E   +          RA + G
Sbjct: 401 -FTDRFEIFILGMEYGNAFSELNDPVDQRHRFEEQMEEREAGNDEADMIDEDYIRAMEFG 459

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP GG+  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 460 MPPTGGLGIGIDRLVMLLTDAPAIRDVLLFPTMR 493


>gi|229069744|ref|ZP_04203029.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228713365|gb|EEL65255.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 432

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 69/279 (24%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 5   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++  
Sbjct: 60  ---KVDVESVVHVIGEIVETSKTEL-------GVEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++  G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVTGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I ++P             A   +TMP     ++  
Sbjct: 297 GDLDTEGEKLLGKYMKEIYNSEFVFITNYP-----------KEARPMYTMPNKENPAITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 426


>gi|46445980|ref|YP_007345.1| asparaginyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|59798542|sp|Q6MEC9|SYN_PARUW RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|46399621|emb|CAF23070.1| probable asparagine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 467

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 67/381 (17%), Positives = 129/381 (33%), Gaps = 51/381 (13%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFE-IAKSVRSEWVL 71
           + +G  + L GWV  VR      F++I D   ++  Q++A PD A ++ +   + +   +
Sbjct: 17  ALIGHDITLKGWVRTVRNQKTFTFIEINDGSTLSNFQIIATPDIAGYDQLINQLSTGVSV 76

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++    +  N       +E+ A  I I+   +     +  +R   E +R     L
Sbjct: 77  SAIGTIVESPGKEQN-------LEMQATAITIIGKCDPEVYLLQKKRHTFEFLR-SIAHL 128

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +T+      R  +  +         F+   TPI+T S  EGA      + ++Q   
Sbjct: 129 RPRTNTIGAVTRVRNALAFATHQFFQKRGFLYIHTPIITGSDCEGAGKMFQVTTLDQNNP 188

Query: 190 ------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+  P       Q    + A      +   P FR E+  + R   EF
Sbjct: 189 ARTPEGRVDYTQDFFGKPTYLTVSGQLNGEIYACALSDVYTFGPTFRAENSNTSRHLAEF 248

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NN 273
           + ++ EM+F + +D ++  E+ L+ + +   +                           +
Sbjct: 249 WMIEPEMAFADLNDNMDCAEDYLKYILKYVLDNCQEDMEFFNKHVATDLISRLEHVINTS 308

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           F R  Y  A+R           P+   +   +EH        F K + +    +      
Sbjct: 309 FERASYTYAVRILEKADKKFEYPVKWGLDLQSEHERFLAEEFFGKPVILTDYPKDIKAFY 368

Query: 332 KGGGGNRAFCDRMNEWARSQG 352
                +      M+      G
Sbjct: 369 MRTNEDNKTVAAMDVLVPKVG 389



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 32/87 (36%), Gaps = 4/87 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R     V+        +     E  +       + G  PH G  AG 
Sbjct: 384 LVPKVGEIIGGSQREERLSVLESKLKEFNLP---AEEYW-WYLELRKFGSVPHSGFGAGF 439

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +R+V    G +N+R+V  FP      D
Sbjct: 440 ERLVQFTTGMENIRDVIPFPRHPGKAD 466


>gi|330801430|ref|XP_003288730.1| lysine-tRNA ligase [Dictyostelium purpureum]
 gi|325081206|gb|EGC34730.1| lysine-tRNA ligase [Dictyostelium purpureum]
          Length = 591

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 7/250 (2%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
             V ++G V   R  G G++F D+   +   QV+ N         +  +   +L    ++
Sbjct: 119 QVVSIAGRVLSKRAAGSGLVFYDLSGEFNKVQVLVNKRLYASGEDEYTKVNGLLRRGDII 178

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RD 136
               A        TG++ L A ++ +LS      LP    +      RF+ R+LD+   +
Sbjct: 179 ---GAIGTAGRSKTGELSLFATEVILLSPCL-HMLPKPNNQLVDLETRFRQRYLDMICNE 234

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           ++ KN + R+++I  +R  +   NF+E  TP++   +   A                +  
Sbjct: 235 SVKKNFIIRSKVIQGVRKYLDNLNFVEVETPMMNMIAGGAAAKPFTTHHNALNLDLFMRI 294

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  G DR ++I   FR+ED      P EF   +  M++ + +DI+   E +
Sbjct: 295 APELYLKQLVVGGMDRVYEIGKQFRNEDIDHTHNP-EFTTCEYYMAYADYNDIMRMTEEL 353

Query: 257 LRGVFEEFSN 266
           ++G+  +  N
Sbjct: 354 IQGIVMDIHN 363


>gi|319900038|ref|YP_004159766.1| asparaginyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319415069|gb|ADV42180.1| asparaginyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 467

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/295 (20%), Positives = 105/295 (35%), Gaps = 29/295 (9%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L   D G+ V + GWV   R    + F+ + D   I  V    D   F
Sbjct: 1   MEKISRTKIIDLLKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLDSF 60

Query: 60  E--IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           E  + K + +   L ++G++         A       E+ A+ IE+L   +        +
Sbjct: 61  EENMLKDITTGACLSVNGVLTESVGSGQKA-------EVHARAIEVLGACDNAYPLQ--K 111

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           + +      +   L  R +T       R  +  ++        F    TPI+TAS  EGA
Sbjct: 112 KGHSMEFLREIAHLRPRTNTFGAVFRIRHNMAMAIHHFFHERGFFYFHTPIITASDCEGA 171

Query: 178 RDFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
                 +  N                 F+    +     Q +  L A+     +   P F
Sbjct: 172 GQMFQVTTKNLYDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F +  D ++  E  ++   +   +       FL
Sbjct: 232 RAENSNTPRHLAEFWMIEPEVAFNDIVDNMDLAEEFIKYCVQWALDNCADDVKFL 286



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P     +E K        F M Q         D  +++A  
Sbjct: 342 HERYLVEEHFKRPVILTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 382

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R    + ++     + I  + +           + G  PH G   
Sbjct: 383 V-LFPKIGEIIGGSEREADYDKLVTRIEELHIPMKDMW----WYLDTRKFGTCPHSGFGL 437

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G  N+R+V  FP +  
Sbjct: 438 GFERLLLFVTGMTNIRDVIPFPRTPR 463


>gi|288927864|ref|ZP_06421711.1| lysine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330698|gb|EFC69282.1| lysine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 576

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 110/259 (42%), Gaps = 10/259 (3%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D    V ++G +   R  G   F++++D  G  QV    D  C    K + +     +  
Sbjct: 49  DEQREVCIAGRMMTRRVMGKASFMELQDSKGRIQVYVTRDDICPNENKELYNTVFKRLLD 108

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFKYR 129
           +              TG+I + A+++ +LS + +    V  +      +     +RF+ R
Sbjct: 109 IGDFVGVRGFVFRTQTGEISVHAKELTLLSKSIKPLPIVKYKDGVAYDKFDDPELRFRQR 168

Query: 130 FLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVN 187
           ++DL  +  + +  +KR ++I++MR       + E  TP L + +    AR F+      
Sbjct: 169 YVDLVVNEGVKETFLKRAKVISTMRQFFDEAGYTEVETPTLQSIAGGATARPFVTHFNAL 228

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               + L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + +
Sbjct: 229 NQEMF-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTLMELYVQYKDYN 286

Query: 248 DILNTMENVLRGVFEEFSN 266
            +++  E +L  +    + 
Sbjct: 287 WMMSFTERLLETICVAVNG 305



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 25/138 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +I D+P               +P T        L           +++L+ NG E+A
Sbjct: 382 QPTFITDYP------------VEMSPLTKMHRSKPGL---------TERFELMVNGKELA 420

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +     +      + F       +  ++          R+ Q GMPP  GI  GIDR+VM
Sbjct: 421 NAYSELNDPIDQEERFVEQMKLADKGDDEAMIIDKDFLRSLQYGMPPTSGIGIGIDRLVM 480

Query: 549 LLLGAKNVREVSLFPMSQ 566
           L+ G   ++EV LFP  +
Sbjct: 481 LMTGQTAIQEVLLFPQMR 498


>gi|223041478|ref|ZP_03611681.1| asparaginyl-tRNA synthetase [Actinobacillus minor 202]
 gi|223017736|gb|EEF16143.1| asparaginyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 467

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 75/404 (18%), Positives = 136/404 (33%), Gaps = 56/404 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D       Q + N D A
Sbjct: 1   MSKFPTISEILSGKVAVGEEVSVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDLA 60

Query: 58  CF-EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
            + +    + +   + + G+++   AE          +EL A+ +E++   E+       
Sbjct: 61  NYQDEVLRLTAGCSVIVTGVIVESPAEGQA-------VELQAKSVEVVGWVEDPDTYPMA 113

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + +      +   L  R + +      R  +  ++      + F   +TP++TAS  EG
Sbjct: 114 AKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEG 173

Query: 177 ARDFLVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPC 219
           A +    S ++                 F+          Q      A    + +   P 
Sbjct: 174 AGEMFRVSTLDLENLPRGEDGKVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGPT 233

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------- 266
           FR E+  + R   EF+ ++ E +F    D     E++L+ VF                  
Sbjct: 234 FRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFRAVLEERKDDLKFFEKHV 293

Query: 267 --------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK 316
                    N ++++F +I Y DAI        +   P+   +   +EH  +     F  
Sbjct: 294 DNTVISRLENFINSDFAQIDYTDAIEVLLKSGKNFEFPVEWGIDLSSEHERYLAEEYFKS 353

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + V    +            R   D     A     PG+  I 
Sbjct: 354 PVVVKNYPKDI-----KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    EV+ +    +G++       +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEVLDKRMVEMGLNP----EDYWWYRDLRR 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+REV  FP +  
Sbjct: 427 YGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRTPR 463


>gi|167767583|ref|ZP_02439636.1| hypothetical protein CLOSS21_02102 [Clostridium sp. SS2/1]
 gi|167710875|gb|EDS21454.1| hypothetical protein CLOSS21_02102 [Clostridium sp. SS2/1]
 gi|291558461|emb|CBL37261.1| asparaginyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 461

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 125/368 (33%), Gaps = 59/368 (16%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             V + GWV   R      FL I D       QVV + +   F+    +     + ++G 
Sbjct: 19  KEVEICGWVKSNRGSKKFGFLVINDGTFFEPIQVVYDQEMGNFDTVSKLNVGTAVIVNGT 78

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V+                E+ A+ +E+         P+  +R   E +R     L  R +
Sbjct: 79  VIVTPD-------AKQPFEIHAKSVEVEGEC-PSDYPLQKKRHTLEYLR-SISHLRPRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------- 189
           T       R++I  ++       +F+   TP++T    EGA +    + ++         
Sbjct: 130 TFQAVFRVRSQIAYAIHKFFQERDFVYVHTPLITGQDCEGAGEMFQVTTMDLNKIAEEGK 189

Query: 190 -----SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 F+  P +     Q      A  F   +   P FR ED  + R   EF+ ++ E+
Sbjct: 190 VDYEQDFFKKPVSLTVSGQLAGETFAQAFRNIYTFGPTFRAEDSNTTRHAAEFWMIEPEI 249

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RICYD 280
           +F + +D +   E +++ +             F                      R+ Y 
Sbjct: 250 AFADLEDNMILAEQMIKYIINYVMEHAQEELQFFNKFVDKGLLERLNHVVSSDFGRVTYT 309

Query: 281 DAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
           +A++       +    +   +   TEH  +   ++F K + V    +            +
Sbjct: 310 EAVKLLEEHNDEFEYKVSWGIDLQTEHERYLTEKIFKKPVFVTDYPKEI----------K 359

Query: 339 AFCDRMNE 346
           AF  +MNE
Sbjct: 360 AFYMKMNE 367



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 78/285 (27%), Gaps = 38/285 (13%)

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
            + P+ +    +    +  + F  I +  P +                 +    +A  + 
Sbjct: 197 FKKPVSLTVSGQLAGETFAQAFRNIYTFGPTFRAEDSNTTRHAAEFWMIEPEIAFADLED 256

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              LA    +   +  +       +  N    + +  RL+        F      +    
Sbjct: 257 NMILAEQMIKYIINYVMEHAQEELQFFNKFVDKGLLERLNHVVSSD--FGRVTYTEAVKL 314

Query: 413 AADARNHIA------------QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
             +  +                E  +      +  ++ D+P     +E K        F 
Sbjct: 315 LEEHNDEFEYKVSWGIDLQTEHERYLTEKIFKKPVFVTDYP-----KEIK-------AFY 362

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
           M                 A    LV    EI  G  R      + +  + +G+       
Sbjct: 363 MKMNED--------NKTVAAMDLLVPAIGEIIGGSQREDDLAKLEERITELGMKP----E 410

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            +       + G   H G   G +R+VM   G  N+R+V  +P +
Sbjct: 411 DYDFYLDLRKYGSTRHAGFGLGFERMVMYATGIANIRDVIPYPRT 455


>gi|29347532|ref|NP_811035.1| lysyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253570876|ref|ZP_04848284.1| lysyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298383771|ref|ZP_06993332.1| lysine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|39932184|sp|Q8A5W4|SYK_BACTN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|29339432|gb|AAO77229.1| lysyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251839825|gb|EES67908.1| lysyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298263375|gb|EFI06238.1| lysine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 576

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/337 (17%), Positives = 128/337 (37%), Gaps = 11/337 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +    D    V ++G +   R  G   F++++D  G  QV    D  C   
Sbjct: 36  NAFSTDIKAEFKDEDEPRQVSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPGE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + A+K+ +L+ + +    V  +    
Sbjct: 96  DKELYNSVFKRLLDLGDFVGIEGFVFRTQMGEISIHAKKLTVLAKSIKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                   +R++ R++DL  +  + +   KR  ++ ++R  +    + E  TPIL + + 
Sbjct: 156 YDSFEDPELRYRQRYVDLVVNEGIKETFEKRATVVRTLRNALDEAGYTEVETPILQSIAG 215

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+  GF+  ++I   FR+E       P E
Sbjct: 216 GASARPFITHHNSLDIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT-DKPD 292
           F  +++ + + + + +++  E +L  +    +       +   I +    RR    D   
Sbjct: 274 FTCMELYVQYKDYNWMMSFTEKLLERICIAVNGSTETVVDGKTISFKAPYRRLPILDAIK 333

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
            +    ++  +E  +    +        +   +   I
Sbjct: 334 EKTGYDLNGKSEEEIRQICKELKMEEIDDTMGKGKLI 370


>gi|331268543|ref|YP_004395035.1| asparaginyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125093|gb|AEB75038.1| asparaginyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 463

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 79/432 (18%), Positives = 148/432 (34%), Gaps = 68/432 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
                G  V++SGWV  +R      F+++ D       QVV   +   F+          
Sbjct: 13  TEKFAGQEVKISGWVRTLRASNKFGFIEVNDGSFFKNIQVVFGAELENFKEISKYAISSS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G V+                E+ A+K+ +   ++    P+  +R   E +R     
Sbjct: 73  ISVEGEVVI-------TENAKQPFEIHAKKVVLEGKSDADY-PLQKKRHTFEYLR-SIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +        R+    ++      + F+   TPI+T S  EGA +    + ++  +
Sbjct: 124 LRPRSNAFSAVFRVRSLAAYAIHKFFQDQGFVYVHTPIITGSDCEGAGEMFRVTTLDMDN 183

Query: 191 FYALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                Q    YK+                  + A  F   +   P FR E+  + R   E
Sbjct: 184 LPKDEQGNIDYKEDFFGKESNLTVSGQLEAEIYALAFRNVYTFGPTFRAENSNTARHASE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSN 272
           F+ ++ EM+F E  D ++  E +++ +                            N V++
Sbjct: 244 FWMIEPEMAFAELKDYMDVAEEMVKYIINYVRENAPEEMEFFNKFIDKGLLERLDNVVNS 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           NF RI Y +A+            P+   +   TEH  +    ++ K + V    +     
Sbjct: 304 NFARISYTEAVEMLQKSGAKFEYPVEWGIDLQTEHERYLTEEIYKKPVFVTDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR 390
                  +AF  RMNE  ++     L          G    +G   +   +   EA    
Sbjct: 361 -------KAFYMRMNEDNKTVAAADLLV-------PGIGEIIGGSQREERLDVLEARMAE 406

Query: 391 LDMQDGDSCFFI 402
           L +   D  +++
Sbjct: 407 LGLNKEDYWWYL 418



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 49/145 (33%), Gaps = 24/145 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +  ++ D+P        K I      F M                 A  
Sbjct: 338 HERYLTEEIYKKPVFVTDYP--------KDIKA----FYMRMNED--------NKTVAAA 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    +V+    + +G++K      +       + G   H G   
Sbjct: 378 DLLVPGIGEIIGGSQREERLDVLEARMAELGLNK----EDYWWYLELRKYGETKHAGYGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           G +R++M L G  N+R+V  FP + 
Sbjct: 434 GFERMIMYLTGMSNIRDVLPFPRTP 458


>gi|284041217|ref|YP_003391147.1| lysyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283820510|gb|ADB42348.1| lysyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 583

 Score =  186 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 66/334 (19%), Positives = 132/334 (39%), Gaps = 37/334 (11%)

Query: 6   THSCGDLGVSDVGSF-------------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           T +  D+  +  G+              V+L+G +   R  G   F +I+D  G  Q   
Sbjct: 33  TTTIADIRAALTGTEPETDLASDERWGNVQLAGRLMVFRISGSASFAEIQDSTGRMQFYF 92

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
             D  C    K++ +     +  +      +       TG++ +  ++ +IL+ A     
Sbjct: 93  RRDDLCPGEDKTLYNTVFKKLLDIGDIIGVKGHVFTTKTGELSVYVKEFKILNKALRPLP 152

Query: 113 ------PVFGEREY-----PESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAEN 160
                    GE+E          R++ R++DL  +   ++  +KRT+++NS+R  +  + 
Sbjct: 153 VVKEVVNEKGEKETYDAFTDPEQRYRQRYVDLIVNPQVRDVFIKRTKLVNSIRQFLSEKG 212

Query: 161 FIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
           ++E  TPIL        AR F         + Y +  A + Y + L+  G+D  F+ A  
Sbjct: 213 YLEVETPILQPIHGGAAARPFRTHHNSLDMTLY-MRIANELYLKRLIVGGYDGVFEFAKD 271

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------TV 270
           FR+E       P EF Q++  +++ +   +++T+E ++  V  + +              
Sbjct: 272 FRNEGMDRTHNP-EFTQVEFYVAYKDYLWMMDTIEEMVEKVALDVAGTTKVTVGENVIDF 330

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              + R+   +AI+ Y            +  V E
Sbjct: 331 KRPWKRLTMFEAIQEYTGVDVSAMEEDELRQVAE 364



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 58/165 (35%), Gaps = 29/165 (17%)

Query: 408 KFCSFAADARNHIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
           K  S      + +  EL       N  +  +I D+P               +P T     
Sbjct: 369 KVDSTMGK--SKLIDELFGDACEPNLIQPTFITDYP------------VEMSPLTKKHRS 414

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF--- 522
              L           +++ +CNG EIA+     +      + F       E  +      
Sbjct: 415 KPGL---------VERFEAICNGKEIANAYSELNDPIDQRERFEEQLRLAERGDEEAMAL 465

Query: 523 -GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                RA + GMPP  G+  GIDR+ M++    ++++V  FP  +
Sbjct: 466 DEDFLRALEYGMPPTAGVGLGIDRLSMIMTNQSSIQDVLFFPQMR 510


>gi|109898198|ref|YP_661453.1| asparaginyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123064673|sp|Q15UN9|SYN_PSEA6 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|109700479|gb|ABG40399.1| asparaginyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 465

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 127/385 (32%), Gaps = 51/385 (13%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCI 73
           VG  V + GWV   R    G+ F+ + D       QV+A      +   + + +   +  
Sbjct: 16  VGQQVTVKGWVRTRRDSKAGLSFVALHDGSCFDPIQVIALNTLNNYADIQRLTTSCSIIA 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++     +  +       +E+ A +IEI+   E         + +      ++  L  
Sbjct: 76  TGVLKESQGQGQS-------LEIEADEIEIVGWVENPDTYPMAPKRHSLEYLREHAHLRP 128

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG---- 189
           R + +      R  +  ++        +   STPILTAS  EGA +    S ++      
Sbjct: 129 RTNVIGAVTRVRNCLSQAIHRFFHENGYCWVSTPILTASDTEGAGEMFRVSTLDMMNVPT 188

Query: 190 ----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+          Q      A+   + +   P FR E+  + R   EF+ 
Sbjct: 189 TEQGQVDFSQDFFGKETFLTVSGQLNGETYATAMSKIYTFGPTFRAENSNTSRHLAEFWM 248

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFL 275
           ++ E++F +  DI    E++L+ VF+                            +  +F+
Sbjct: 249 IEPEVAFADLSDIAQLSEDLLKYVFKAVLAERADDMAFFAQRINKDAITRLEKVIEQDFV 308

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
           R+ Y DAI            P+      +     E  +  + +      + +    K   
Sbjct: 309 RMDYTDAIEILQNCGKKFEFPVSWG--VDLSSEHERYLAEEHVGAPIIMQNYPKDIKAFY 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 M-RINDDNKTVAAMDVLAPGIGEII 390



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 78/226 (34%), Gaps = 30/226 (13%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAADARN 418
           FW ++     A +  +A+ L+    + +   +  +   D  FF         +       
Sbjct: 246 FWMIEPEVAFADLSDIAQ-LSEDLLKYVFKAVLAERADDMAFFAQRINKDAITRLEKVIE 304

Query: 419 HIAQELGIINC--------NCFEF--CWIMDFPFYEWNEEEKKIDFAHN---PFTMPQGG 465
                +   +           FEF   W +D      + E ++     +   P  M    
Sbjct: 305 QDFVRMDYTDAIEILQNCGKKFEFPVSWGVD-----LSSEHERYLAEEHVGAPIIMQNYP 359

Query: 466 ME----SLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
            +     ++ ND     A   D++  G  EI  G  R    +V  +  + +G+     + 
Sbjct: 360 KDIKAFYMRINDDNKTVA-AMDVLAPGIGEIIGGSQREERLDVFDRRLAEMGLD----QE 414

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +       + G  PH G   G +R+V  + G +NVR+V  FP + 
Sbjct: 415 DYSWYRDLRRYGTVPHSGFGLGFERLVAYVTGMQNVRDVIAFPRTP 460


>gi|332306229|ref|YP_004434080.1| asparaginyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173558|gb|AEE22812.1| asparaginyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 465

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 128/385 (33%), Gaps = 51/385 (13%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCI 73
           VG  V + GWV   R    G+ F+ + D       QV+A      +   + + +   +  
Sbjct: 16  VGQQVTVKGWVRTRRDSKAGLSFIALHDGSCFDPIQVIALNTLNNYTDIQRLTTSCSIIA 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++     +  +       +E+ A ++E++   E         + +      ++  L  
Sbjct: 76  TGVLKESQGQGQS-------LEIEASEVEVVGWVENPDTYPMAPKRHSLEYLREHAHLRP 128

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R + +      R  +  ++        +   STPILTAS  EGA +    S ++  +  A
Sbjct: 129 RTNVIGAVTRVRNCLSQAIHRFFHENGYCWVSTPILTASDTEGAGEMFRVSTLDMMNVPA 188

Query: 194 LPQA-----------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             Q                    Q      A+   + +   P FR E+  + R   EF+ 
Sbjct: 189 TEQGQVDFSQDFFGKETFLTVSGQLNGETYATAMSKIYTFGPTFRAENSNTSRHLAEFWM 248

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFL 275
           ++ E++F +  DI    E++L+ VF+                            +  +F+
Sbjct: 249 IEPEVAFADLSDIAQLSEDLLKYVFKAVLAERADDMAFFAQRINKEAISRLEKVIEQDFV 308

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
           R+ Y DAI            P+      +     E  +  + +      + +    K   
Sbjct: 309 RMDYTDAIEILQNCGKKFEFPVSWG--VDLSSEHERYLAEEHVGAPIIMQNYPKDIKAFY 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 M-RINDDNKTVAAMDVLAPGIGEII 390



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 80/226 (35%), Gaps = 30/226 (13%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAADARN 418
           FW ++     A +  +A+ L+    + +   +  +   D  FF      +  S       
Sbjct: 246 FWMIEPEVAFADLSDIAQ-LSEDLLKYVFKAVLAERADDMAFFAQRINKEAISRLEKVIE 304

Query: 419 HIAQELGIINC--------NCFEF--CWIMDFPFYEWNEEEKKIDFAHN---PFTMPQGG 465
                +   +           FEF   W +D      + E ++     +   P  M    
Sbjct: 305 QDFVRMDYTDAIEILQNCGKKFEFPVSWGVD-----LSSEHERYLAEEHVGAPIIMQNYP 359

Query: 466 ME----SLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
            +     ++ ND     A   D++  G  EI  G  R    +V  +  + +G++    + 
Sbjct: 360 KDIKAFYMRINDDNKTVA-AMDVLAPGIGEIIGGSQREERLDVFDRRLAEMGLN----QE 414

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +       + G  PH G   G +R+V  + G +NVR+V  FP + 
Sbjct: 415 DYSWYRDLRRYGTVPHSGFGLGFERLVAYVTGMQNVRDVIAFPRTP 460


>gi|256842571|ref|ZP_05548073.1| lysyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256735927|gb|EEU49259.1| lysyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 576

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/332 (19%), Positives = 131/332 (39%), Gaps = 22/332 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR++G +   R  G   F++++D  G  QV  + D  C +  K   +     +  +    
Sbjct: 55  VRIAGRIMSRRIMGKASFMELQDSEGRIQVYISRDDICPDENKDTYNVVFKKLLDIGDFV 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFLDLR 134
             +        G+I + AQ++ +LS +      V  +            +R++ R++DL 
Sbjct: 115 GIKGFVFRTQMGEISVHAQELTVLSKSLRPLPVVKYKDGVAYDGFNDPELRYRQRYVDLV 174

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            +  +    +KR  II +MR  +    + E  TPIL + +    AR F+          Y
Sbjct: 175 VNEGVKDIFMKRAAIIKTMRTALDEAGYTEVETPILQSIAGGASARPFITHHNSLDIDLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + +++ 
Sbjct: 235 -LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMELYVQYKDYNWMMSF 292

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            E +L  +    +  +  + +   I +    R         R PI+     +     E +
Sbjct: 293 TEKLLERICIAVNGTSESTIDGKTISFKAPFR---------RLPILEAIKEKTGYDLEGK 343

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
              +I ++    ++      G G      D +
Sbjct: 344 TEDEIRAICKELKMEIDDTMGKG---KLIDEI 372



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 81/236 (34%), Gaps = 40/236 (16%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W  S  +  L  I   ++ +      G             I   +  + G D       +
Sbjct: 288 WMMSFTEKLLERICIAVNGTSESTIDGKTISFKAPFRRLPILEAIKEKTGYDLEGKTEDE 347

Query: 406 PLKFCSFAADARNHIAQELG---IINCNCFEFC--------WIMDFPFYEWNEEEKKIDF 454
               C    + +  I   +G   +I+    EFC        +I+D+P             
Sbjct: 348 IRAICK---ELKMEIDDTMGKGKLIDEIFGEFCEGTFIQPTFIIDYP------------V 392

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             +P T        L           +++L+ NG E+A+     +      + F      
Sbjct: 393 EMSPLTKMHRSKPGL---------TERFELMVNGKELANAYSELNDPIDQEERFKEQLRL 443

Query: 515 KEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            E  ++          RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP  +
Sbjct: 444 SEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLVMLMTGQTTIQEVLLFPQMR 499


>gi|119493136|ref|ZP_01624042.1| asparaginyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119452790|gb|EAW33966.1| asparaginyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 463

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 74/391 (18%), Positives = 137/391 (35%), Gaps = 52/391 (13%)

Query: 6   THSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE-I 61
           T    + L        + + GWV   R      F+++ D   +   QVV N D   ++ I
Sbjct: 3   TRRIAEILRSGQPDEALTVQGWVRTKREFKEFAFVEVNDGSAMANLQVVLNLDLENYQNI 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K + +   + + G ++   A+         ++EL A+ + +   A+     +  +R   
Sbjct: 63  LKQLNTGASVEVVGTLVESPAKG-------QRVELKAESVIVYGDADPETYVLQKKRHSF 115

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R     L  R +T       R     ++        F+   TPI+TAS  EGA +  
Sbjct: 116 EFLR-TIAHLRARTNTYGAVFRVRNACSAAVHQFFQERGFLWIHTPIITASDCEGAGEMF 174

Query: 182 VPSRVNQG--------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDED 224
             + ++                 F+  P       Q +  +MA  F   +   P FR E+
Sbjct: 175 GVTNLDFKNLPLTESKEVDFSRDFFGKPTFLTVSGQLQAEIMALAFGNVYTFGPTFRAEN 234

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------- 271
             + R   EF+ ++ EM+F + +  ++  E+ L+ +F+                      
Sbjct: 235 SNTSRHLAEFWMIEPEMAFCDLEGNMDLAEDFLKYIFKFVLEKCPEDMEFFNKRIDKTVL 294

Query: 272 --------NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVN 321
                   N F R+ Y DAI+           P+   +   +EH  +    +F K + V 
Sbjct: 295 ETADNIINNQFERLTYTDAIKLLEKADKKFEFPVSWGLDLQSEHERYLAEDLFKKPVIVT 354

Query: 322 PGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              +         G +      M+  A   G
Sbjct: 355 DYPKDIKAFYMRLGDDGKTVRAMDVLAPKIG 385



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    +V+      + ++ E +           + G  PH G   G +R+V  
Sbjct: 386 EIIGGSQREERLDVLENRMKEMDVNSEELW----WYLELRKYGTVPHAGFGLGFERVVQF 441

Query: 550 LLGAKNVREVSLFPMSQNFCD 570
           + G  N+R+V  FP +    D
Sbjct: 442 MTGMANIRDVIPFPRAPLSID 462


>gi|59711060|ref|YP_203836.1| lysyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|75354565|sp|Q5E7P8|SYK_VIBF1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|59479161|gb|AAW84948.1| lysine tRNA synthetase, inducible [Vibrio fischeri ES114]
          Length = 501

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/285 (21%), Positives = 128/285 (44%), Gaps = 25/285 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V   R      FL I++  G  Q  A       E+ K ++ ++     G ++  
Sbjct: 64  VAIAGRVMAKRGP----FLLIQEVSGKIQAYAAK-----EVQKELKDKYQGLDIGDIIGV 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                 +    G + ++ ++  +L+ A   PLP        + +R++ R++DL  +   +
Sbjct: 115 KGALHKSG--KGDLYVNMEEYVLLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNDDSR 171

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  + R++++ ++R  M+ + F+E  TP++        AR F+          Y L  AP
Sbjct: 172 HAFIVRSKVVAAIRNFMVDKGFMEVETPMMHVIPGGASARPFVTHHNALDVDMY-LRIAP 230

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++  M++ + +D+++  E +L 
Sbjct: 231 ELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYNDLMDLTEEMLS 289

Query: 259 GVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
            V       + +            + R+   DAI++Y  D  +++
Sbjct: 290 TVATSVLGSDKMPYGEHTVDFGGKYARMSMLDAIKQYNPDHAEIQ 334



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + ND       +++    G E+A+G    + ++   + F
Sbjct: 377 EPKLMQPTFITEYPADISPLARRNDDNDFITDRFEFFIGGREVANGFSELNDAQDQDERF 436

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP 
Sbjct: 437 KAQVNAKESGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFPS 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|313158498|gb|EFR57892.1| asparagine--tRNA ligase [Alistipes sp. HGB5]
          Length = 462

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 60/312 (19%), Positives = 115/312 (36%), Gaps = 29/312 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEW 69
           L      + + + GWV   R +  + F+ + D   +  +    D      E  K + +  
Sbjct: 10  LKSGAEDTDIVVKGWVRTKRGNKNVAFIALNDGSCVANIQIVVDLAKFGEEQLKPITTGA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + +DG +++             ++E+ A+KIEI   A+    P+  +    E +R    
Sbjct: 70  CIRVDGRLVASLGSG-------QRVEVQAEKIEIYGTADPETYPLQKKGHSLEFLR-DIA 121

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           +L  R +T    +  R  +  ++      E F    TP++TAS  EGA      + ++  
Sbjct: 122 YLRPRTNTFGAVLRIRHAMAYAIHEYFNREGFYYFHTPLITASDCEGAGAMFQVTTLDLN 181

Query: 190 S--------------FYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                          F+          Q +  L A    R +   P FR E+  + R   
Sbjct: 182 DVPKNEQGQVDFSQDFFGKACNLTVSGQLEGELGALSLGRIYTFGPTFRAENSNTPRHAS 241

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF+ ++ E +F E +D +   E+ L+ +     +       F+   +D+ +         
Sbjct: 242 EFWMIEPEAAFYELEDNMELAEDFLKYLIRYALDNCAEDLEFMNKMWDNGLLD--RLHFV 299

Query: 293 LRNPIIMHNVTE 304
           L N     + TE
Sbjct: 300 LENDFKRLDYTE 311



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 73/190 (38%), Gaps = 29/190 (15%)

Query: 383 NTEAIRVRLDMQDGDSCFFIAGDPLKF-CSFAADARNHIAQELGIINCNCFEFCWIMDFP 441
             E    RLD  +G      +G   +F C +  D ++    E  ++  +      ++++P
Sbjct: 299 VLENDFKRLDYTEGIEILKASGRKFEFPCDWGCDLQSE--HERYLVEEHFKRPVILINYP 356

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHM 500
                   K I      F M Q         D  +++A   D++  G  EI  G  R   
Sbjct: 357 --------KDIKA----FYMKQND-------DGKTVRAM--DVLFPGIGEIIGGSEREAD 395

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
              +    + +G++++ +           + G  PH G   G DR+++ + G  N+R+V 
Sbjct: 396 YGKLHARVAELGMNEKELW----WYLDTRRWGSAPHSGFGLGFDRLLLFVTGMTNIRDVQ 451

Query: 561 LFPMSQNFCD 570
            FP +    D
Sbjct: 452 PFPRTPKNAD 461


>gi|332796317|ref|YP_004457817.1| aspartyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694052|gb|AEE93519.1| aspartyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 430

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 82/302 (27%), Positives = 146/302 (48%), Gaps = 23/302 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAK 63
           ++    ++     G  V ++GWVH +R  GG  F+ +RD  G+ Q+V +  ++  FE++K
Sbjct: 3   KSDFVSEISPEQDGKEVTVAGWVHTIRDLGGKKFILLRDRSGLGQIVIDKSNTKAFELSK 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPE 122
            +  E V+ + G+V +              +E+ A ++EILS A+  LPL V G+     
Sbjct: 63  DLTQESVILVKGVVKADKR-------APNGVEIHANELEILSKAKAPLPLDVSGKVNADL 115

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R + R LDLRR  +   I  ++  I + R  + ++ F+E  TP + A++ EG      
Sbjct: 116 DTRLRERLLDLRRLEMEAVIKIQSEAIRAFREYLYSQKFVEIFTPKIIATATEGGAQLFP 175

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                + +F A  Q+PQ YK+ L+A   +R F++AP +R E+  +     EF   D+E++
Sbjct: 176 VIYFGKEAFLA--QSPQLYKE-LLAGTIERVFEVAPAWRAEESDTPYHLSEFLSADIEVA 232

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F + +DI+N +EN L  +               R      ++      P+++ PI     
Sbjct: 233 FADYNDIMNIVENTLDFMVNRV-----------RSNCQKELKILNHTLPEIKKPIKRITY 281

Query: 303 TE 304
           +E
Sbjct: 282 SE 283



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 24/136 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +I+D+P                PF   +      K N+     +  +DL+    EIA
Sbjct: 316 DLYFIIDWP------------STARPFYTRR------KSNNPE--LSESFDLIYRWVEIA 355

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  RN+  EV+ +     G++       F    + F  GMPPH G+  G+ R++ML  G
Sbjct: 356 SGSSRNYKREVLEEELKTRGLNI----ASFEFFLKWFDYGMPPHAGVGIGVQRLMMLFTG 411

Query: 553 AKNVREVSLFPMSQNF 568
            +NV+E+SLFP  +  
Sbjct: 412 LQNVKEISLFPRDKKR 427


>gi|317498655|ref|ZP_07956948.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894142|gb|EFV16331.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 461

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 125/368 (33%), Gaps = 59/368 (16%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             V + GWV   R      FL I D       QVV + +   F+    +     + ++G 
Sbjct: 19  KEVEICGWVKSNRGSKKFGFLVINDGTFFEPIQVVYDQEMGNFDTVSKLNVGTAVIVNGT 78

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V+                E+ A+ +E+         P+  +R   E +R     L  R +
Sbjct: 79  VIVTPD-------AKQPFEIHAKSVEVEGEC-PSDYPLQKKRHTLEYLR-SISHLRPRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------- 189
           T       R++I  ++       +F+   TP++T    EGA +    + ++         
Sbjct: 130 TFQAVFRVRSQIAYAIHKFFQERDFVYVHTPLITGQDCEGAGEMFQVTTMDLNKIAEEGK 189

Query: 190 -----SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 F+  P +     Q      A  F   +   P FR ED  + R   EF+ ++ E+
Sbjct: 190 VDYEQDFFKKPVSLTVSGQLAGETFAQAFRNIYTFGPTFRAEDSNTTRHAAEFWMIEPEI 249

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RICYD 280
           +F + +D +   E +++ +             F                      R+ Y 
Sbjct: 250 AFADLEDNMILAEQMIKYIINYVMEHAQEELQFFNKFVDKGLLERLNHVVSSDFGRVTYT 309

Query: 281 DAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
           +A++       +    +   +   TEH  +   ++F K + V    +            +
Sbjct: 310 EAVKLLEEHNDEFEYKVSWGIDLQTEHERYLTEQIFKKPVFVTDYPKEI----------K 359

Query: 339 AFCDRMNE 346
           AF  +MNE
Sbjct: 360 AFYMKMNE 367



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 78/285 (27%), Gaps = 38/285 (13%)

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
            + P+ +    +    +  + F  I +  P +                 +    +A  + 
Sbjct: 197 FKKPVSLTVSGQLAGETFAQAFRNIYTFGPTFRAEDSNTTRHAAEFWMIEPEIAFADLED 256

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              LA    +   +  +       +  N    + +  RL+        F      +    
Sbjct: 257 NMILAEQMIKYIINYVMEHAQEELQFFNKFVDKGLLERLNHVVSSD--FGRVTYTEAVKL 314

Query: 413 AADARNHIA------------QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
             +  +                E  +      +  ++ D+P     +E K        F 
Sbjct: 315 LEEHNDEFEYKVSWGIDLQTEHERYLTEQIFKKPVFVTDYP-----KEIK-------AFY 362

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
           M                 A    LV    EI  G  R      + +  + +G+       
Sbjct: 363 MKMNED--------NKTVAAMDLLVPAIGEIIGGSQREDDLAKLEERITELGMKP----E 410

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            +       + G   H G   G +R+VM   G  N+R+V  +P +
Sbjct: 411 DYDFYLDLRKYGSTRHAGFGLGFERMVMYATGIANIRDVIPYPRT 455


>gi|197284659|ref|YP_002150531.1| asparaginyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227356864|ref|ZP_03841243.1| asparaginyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|194682146|emb|CAR41761.1| asparaginyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227162934|gb|EEI47879.1| asparaginyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 466

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 130/385 (33%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VG  V + GWV   R    GI FL + D      V A  ++        V    +    G
Sbjct: 16  VGEDVTVRGWVRTRRDSKAGISFLTVYDGSCFNPVQAIINNNLPNYQDEV----LHLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A K+ ++ + ++        + +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPGQGQNFEIHATKVVVVGMVDDPETYPMAAKRHSVEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           + +      R  +  ++      + F   STP++TA+  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITAADTEGAGEMFRVSTLDMNNLPRTD 191

Query: 190 --------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      AS   + +   P FR E+  + R   EF+ ++
Sbjct: 192 KGEVDFSEDFFGREAFLTVSGQLNGETYASALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + +DI    E +L+  F                           + ++++F +I
Sbjct: 252 PEVAFADLNDIAGLAEKMLKYAFSAVLAERRDDMEFFAQRVDKEAITRLEHFIASDFAQI 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI           NP+    ++ +EH  +   + F   + V    +          
Sbjct: 312 DYTDAITVLENCGQKFENPVYWGVDLSSEHERYLAEKHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRMNEDGKTVAAMDVLAPGIGEII 391



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 5/123 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    E+  + 
Sbjct: 347 EKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLEMFDKR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + +G++K      +       + G  PH G   G +R+V  + G  N+REV  FP +  
Sbjct: 407 LAEMGMNK----EDYWWYRDLRRYGTVPHSGFGLGFERLVAYVTGVTNIREVIPFPRTPR 462

Query: 568 FCD 570
             D
Sbjct: 463 NVD 465


>gi|325095996|gb|EGC49306.1| lysyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 609

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 59/336 (17%), Positives = 126/336 (37%), Gaps = 17/336 (5%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV-----VANPDSACFEIAKSVRSEWVL 71
              +R++G ++  R  G  +IF DIR      QV         D    +  + +R   ++
Sbjct: 125 DKELRIAGRIYTKRSAGAKLIFYDIRAEGVKIQVACQAQNVKGDIPFEDQHEHLRRGDIV 184

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G        T   N   G++ + A ++ +L+      +P        +  R++ R+L
Sbjct: 185 GIVGF----PGRTAPKNRADGELSIFATEVVLLAPCL-HQIPSEHYGLRDQEQRYRQRYL 239

Query: 132 DLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL  +   +N  V R+++I+ +R      +F+E  TP++   +        +    +   
Sbjct: 240 DLIMNDRSRNVFVTRSKMISYIRRFFDERDFVEVETPMMNTIAGGATAKPFITHHNDLNM 299

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  DI+
Sbjct: 300 DMFLRVAPELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDIM 358

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT--EHFVH 308
           N  E ++ G+ +  + G      F     ++    +      +     +   T  +    
Sbjct: 359 NVTEELVSGLVKHITGG--YETTFHTQAGEEFKVNWKAPWKRIEMIPALEEATGEKFPPG 416

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            +         +    +   I       N    D++
Sbjct: 417 DQLHTMETNEFLKKLLKKVNIECTPPETNARMLDKL 452



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 4/95 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++      EI +     +        F      K   ++           + + G
Sbjct: 486 GLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQASQKAQGDDEAQLIDENFCTSLEFG 545

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 546 LPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 580


>gi|262384430|ref|ZP_06077565.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262294133|gb|EEY82066.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 576

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 56/272 (20%), Positives = 114/272 (41%), Gaps = 10/272 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR++G +   R  G   F++++D  G  QV  + D  C +  K   +     +  +    
Sbjct: 55  VRIAGRIMSRRIMGKASFMELQDSEGRIQVYISRDDICPDENKDTYNVVFKKLLDIGDFV 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFLDLR 134
             +        G+I + AQ++ +LS +      V  +            +R++ R++DL 
Sbjct: 115 GIKGFVFRTQMGEISVHAQELTVLSKSLRPLPVVKYKDGVAYDGFNDPELRYRQRYVDLV 174

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            +  +    +KR  II +MR  +    + E  TPIL + +    AR F+          Y
Sbjct: 175 VNEGVKDIFMKRAAIIKTMRTALDEAGYTEVETPILQSIAGGASARPFITHHNSLDIDLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + +++ 
Sbjct: 235 -LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMELYVQYKDYNWMMSF 292

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            E +L  +    +  +  + +   I +    R
Sbjct: 293 TEKLLERICIAVNGTSESTIDGKTISFKAPFR 324



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 80/236 (33%), Gaps = 40/236 (16%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W  S  +  L  I   ++ +      G             I   +  + G D       +
Sbjct: 288 WMMSFTEKLLERICIAVNGTSESTIDGKTISFKAPFRRLPILEAIKEKTGYDLEGKSEDE 347

Query: 406 PLKFCSFAADARNHIAQELG---IINCNCFEFC--------WIMDFPFYEWNEEEKKIDF 454
               C      +  I   +G   +I+    EFC        +I+D+P             
Sbjct: 348 IRTICK---ALKMEIDDTMGKGKLIDEIFGEFCEGTFIQPTFIIDYP------------V 392

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             +P T        L           +++L+ NG E+A+     +      + F      
Sbjct: 393 EMSPLTKMHRSKPGL---------TERFELMVNGKELANAYSELNDPIDQEERFKEQLRL 443

Query: 515 KEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            E  ++          RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP  +
Sbjct: 444 SEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLVMLMTGQTTIQEVLLFPQMR 499


>gi|157369974|ref|YP_001477963.1| asparaginyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166980090|sp|A8GCJ5|SYN_SERP5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|157321738|gb|ABV40835.1| asparaginyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 466

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 69/417 (16%), Positives = 136/417 (32%), Gaps = 36/417 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSE 68
           G + V S V + GWV   R    GI FL + D      + A  +++     +    + + 
Sbjct: 12  GRAAVDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPLQAVVNNSLPNYQDEVLHLTTG 71

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G+V++   E  +        EL A  I+++   ++        + +      + 
Sbjct: 72  CSIEVTGVVVASPGEGQS-------FELQATAIKVVGWVDDPDTYPMAAKRHSIEYLREV 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R + +      R  +  ++        F   STP++TAS  EGA +    S ++ 
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFYHENGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 189 G--------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q      A    + +   P FR E+  + R  
Sbjct: 185 ENLPRTDKGAVDFSQDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHL 244

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTD 289
            EF+ ++ E++F + +DI    E +L+ VF+   N       F   R+  D   R     
Sbjct: 245 AEFWMIEPEVAFADLEDIAELAEKMLKYVFQAVLNERMDDMQFFAERVDKDAIDRLQRFV 304

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRV-----FSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
             D    +      E  + S         +   LS      +     K     + +   +
Sbjct: 305 TSDFAQ-VDYTEAVEILIASGQTFENPVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI 363

Query: 345 NEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
             +       G       +   G    +G   +   +   +     + +   D  ++
Sbjct: 364 KAFYMRMNDDGKTVAAMDVLAPGIGEIIGGAQREERLDVLDQRLEAMGLNKEDYWWY 420



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 44/120 (36%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    +V+ Q 
Sbjct: 347 EKHFKAPVVVKNYPKDIKAFYMRMNDDGKTVAAMDVLAPGIGEIIGGAQREERLDVLDQR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              +G++K      +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 407 LEAMGLNK----EDYWWYRDLRRYGTVPHAGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|330752584|emb|CBL87530.1| lysyl-tRNA synthetase [uncultured Flavobacteria bacterium]
          Length = 567

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 69/330 (20%), Positives = 131/330 (39%), Gaps = 30/330 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS--EWVLCIDG 75
           G  V ++G +   R  G   F ++ D  G  QV  N D  C    KS+ +     L   G
Sbjct: 47  GKNVIVAGRLMSRRIQGSASFAEVLDSTGRIQVYFNRDVICPGENKSMYNDVFKKLLDIG 106

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKY 128
            ++    +     +  GQ  ++ +  +IL+ +         + E           +R++ 
Sbjct: 107 DIVGLEGKLFTTKV--GQQTVNVKNFKILNKSLRPLPLPKTDSEGNIYDAFNDPELRYRQ 164

Query: 129 RFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R++DL  +   K   +KR++I  ++R  +  + ++E  TPIL        AR F+     
Sbjct: 165 RYVDLIVNPNVKETFIKRSKITTTIRDFLTEKGYLEVETPILQPIPGGAAARPFVTHHNA 224

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           +    Y L  A + Y + L+  GF+  F+ A  FR+E       P EF  +++ +++ + 
Sbjct: 225 HNTKLY-LRIANELYLKRLIVGGFEGVFEFAKDFRNEGMDRTHNP-EFTVMELYVAYKDY 282

Query: 247 DDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY------GTDKP 291
             ++ T EN+L  +                      + R+   +AI++Y        D+ 
Sbjct: 283 FWMMETTENLLESISYAIHKKTEISFGDQKINFKAPYPRVPIFEAIKKYTGIDISQMDEK 342

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
           +LR      NV       E ++  +I    
Sbjct: 343 ELRKTAAKLNVEVDETMGEGKLIEEIFGEK 372



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 62/161 (38%), Gaps = 25/161 (15%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           P +M     E     +L      +++L+ +G E+A+     +        F +     E 
Sbjct: 387 PKSMSPLTKEHRTNKNL----TERFELLVDGKELANAYSELNDPIDQKNRFESQLALSEK 442

Query: 518 VENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLM 573
            ++          RA + GMPP  GI  GIDR+VML+    +++EV  FP  +   ++L 
Sbjct: 443 GDDEAMFIDQDFLRALEYGMPPTSGIGIGIDRLVMLMTNNTSIQEVLFFPQMKAEQEIL- 501

Query: 574 GSPSTVSVEQLRELGLRIVENPKKILKISVTTILRNVYGLK 614
                            + EN K +LK         +  +K
Sbjct: 502 ----------------ELTENEKNVLKFISRKTPAILQEIK 526


>gi|228920928|ref|ZP_04084266.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228838717|gb|EEM84020.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 432

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 70/279 (25%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 5   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E ++ + G ++  S   +        +E+ A ++++++ AE LP  +  ++  
Sbjct: 60  ---KVDVESIVHVIGEIVETSKTEL-------GVEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKSTLVQSFSEVLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQREAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEKELQLLQI 266



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/153 (29%), Positives = 63/153 (41%), Gaps = 26/153 (16%)

Query: 415 DARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
           D      + LG      +  EF +I  +P             A   +TMP     S+  +
Sbjct: 298 DLDTEGEKLLGKYVKEIYNSEFVFITHYP-----------KEARPMYTMPNKENPSITDS 346

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                    +DL+  G EI SG  R H  E++L +F   G+       +F      F+ G
Sbjct: 347 ---------FDLLYKGLEITSGAQRIHNHEMLLASFKEKGLHP----EKFQSYLNTFRYG 393

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 394 CPPHGGFGIGLERVVYKLLELTNVREASAFPRD 426


>gi|125544665|gb|EAY90804.1| hypothetical protein OsI_12406 [Oryza sativa Indica Group]
          Length = 630

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/346 (17%), Positives = 128/346 (36%), Gaps = 35/346 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           + +Y++ + GD     V     L+G +   R     ++F D+       QV A+  ++  
Sbjct: 115 IEKYKSMNVGD---KLVDVTECLAGRIMTKRAQSSKLLFYDLYGGGEKVQVFADARTSEL 171

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E  + ++    L    +V              G++ +  +KI +LS    +      E  
Sbjct: 172 EDNEFIKFHSTLKRGDIV---GVCGYPGKSKRGELSIFPKKIVVLSPCLHMMPRQKSEGS 228

Query: 120 Y-------------------PESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE 159
                                +  R++ R+LDL  +  +      R+++++ +R  +   
Sbjct: 229 AVPTPWAPGMGRNIEKYVLRDQETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDGL 288

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
           +F+E  TP++   +   A    V           +  AP+ Y + L+  G DR ++I   
Sbjct: 289 DFLEVETPMMNMIAGGAAARPFVTHHNELNMRLYMRIAPELYLKELVVGGLDRVYEIGKQ 348

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           FR+E       P EF   +  M++ + +D++   E +L G+ +E + G        +I Y
Sbjct: 349 FRNEGIDLTHNP-EFTTCEFYMAYADYNDLMKLTETMLSGMVKELTGGY-------KIKY 400

Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                     + D   P    ++ +           K LS +   +
Sbjct: 401 HANGVEKPPIEIDFTPPFRKIDMIDQLEAMAKLNIPKDLSSDEANK 446


>gi|308272633|emb|CBX29237.1| Lysyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 498

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 63/292 (21%), Positives = 115/292 (39%), Gaps = 20/292 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             ++  +   ++G +  +   G   F+  +D  G  Q     D    +  K  +   +  
Sbjct: 51  TNTEDDTVFSVAGRIMAMNSFGKSSFIRFKDRSGQFQAYIRKDKIGDDSYKLFKQLDIGD 110

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             GL      +       TG+  L A ++ ++  A   PLP           R++ R+LD
Sbjct: 111 YVGL------KGSLFKTKTGEWTLFAFELRLVCKAIR-PLPEKFHGLKDTEKRYRQRYLD 163

Query: 133 LRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +   +   VKR++II  +R   +  ++IE  TP++        A  F          
Sbjct: 164 LIMNQNVRDIFVKRSQIIRKIRNYFLERDYIEAETPMMQQIPGGAEATPFKTHHNALGID 223

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  L+   ++    D++
Sbjct: 224 LF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTHHNP-EFTMLEFYEAYATYQDLM 281

Query: 251 NTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRYGTDKPDL 293
           +  EN+   +  E +              S  + RI   +A+  +G   P L
Sbjct: 282 DLTENLFSKLSLEITGSTSIVYQGNSIDFSGKWKRISLLNALEEFGGVDPSL 333



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 4/101 (3%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYR 527
           ND       +++L   G EIA+G    +  E     F      ++  +            
Sbjct: 393 NDKDPSMTDRFELFIAGCEIANGFSELNDPEDQKNRFIQQLSIRQDGDEEAHFMDEDYIE 452

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + GMPP  G   GIDR+ ML   + ++REV LFP  +  
Sbjct: 453 ALEYGMPPTAGEGIGIDRLTMLFTDSASIREVILFPHMKPA 493


>gi|124006561|ref|ZP_01691394.1| asparaginyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123987974|gb|EAY27654.1| asparaginyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 490

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 55/283 (19%), Positives = 105/283 (37%), Gaps = 27/283 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IAKSVRSEW 69
           L  ++    V + GWV   R    + F+ + D   I  +    +++  +  +   +    
Sbjct: 17  LASTEYDREVTVRGWVRHRRGSKEVFFVHLNDGSTIQNIQIVVNASNLDSNVLNQITVGA 76

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L ++G +++      +        E+ A  + IL  A+    P+  ++   E +R +  
Sbjct: 77  CLQVNGNLVASQGAGQSC-------EVQASDVVILGAADPEKYPIQPKKHSMEFLR-ENA 128

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV--- 186
            L +R +T       R     ++        F     PI+T S  EGA +    + +   
Sbjct: 129 HLRMRTNTFSAVFRLRHAAAYAIHQYFNERGFFYLHAPIITGSDAEGAGEMFQVTTLPLD 188

Query: 187 -----------NQGSFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                       +  F+  P       Q +  L A G    +   P FR E+  + R   
Sbjct: 189 NPPKNEEGKIDFKEDFFGQPTNLSVSGQLQGELAAMGLGLIYTFGPTFRAENSNTTRHLA 248

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           EF+ ++ EM+F EQ+D  N  E+ L+ + +           FL
Sbjct: 249 EFWMIEPEMAFYEQEDNHNLAEDFLKYLIKYVLENCQDDLKFL 291



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 49/145 (33%), Gaps = 20/145 (13%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +  +   + D+P                 F M Q   E      + ++    
Sbjct: 361 HERYLVEKHFKKPVIVYDYP------------RNIKAFYMKQNEGEEEGRETVRAMDI-- 406

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    E +      VGI    +E          + G  PH G   
Sbjct: 407 --LVPGIGEIIGGSQREDDLEHLKTRMDEVGIPHHELE----WYLDLRRFGSAPHSGFGL 460

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           G +R ++ + G  N+R+V  FP + 
Sbjct: 461 GFERFILFITGMANIRDVIPFPRTP 485


>gi|119468800|ref|XP_001257882.1| lysyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119406034|gb|EAW15985.1| lysyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 605

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/294 (21%), Positives = 127/294 (43%), Gaps = 19/294 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIA-----KSVR 66
           G       VR++G ++  R  G  + F DIR      QVV    +A  ++A     + +R
Sbjct: 117 GEQKPDVTVRIAGRIYTKRSSGSKLFFYDIRAEGVKVQVVCQAQNATGDVAFEAQHEHLR 176

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ + G        T   N   G++ + A ++ +L+      +P        +  RF
Sbjct: 177 RGDIVGVVGF----PGRTSPKNRADGELSIFATEVVLLAPCL-HAIPSEHYGFQDKEQRF 231

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL  +   +N  V R++I++ +R    + +FIE  TP++ A +    A+ F+   
Sbjct: 232 RQRYLDLIMNERSRNVFVTRSKIVSYVRNFFDSRDFIEVETPMMNAIAGGATAKPFITHH 291

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                + + +  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ 
Sbjct: 292 NDLDMNLF-MRVAPELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYA 349

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +  D++N  E ++ G+ +  + G   + +         +       P  R  +I
Sbjct: 350 DVYDVMNLTEELISGLVKHVTGGYETTFH----TQSGEVYNVNWKAPWRRVEMI 399



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 4/96 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
           +    +++      EI +     +        F      K+  ++           + + 
Sbjct: 482 AGLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQARQKDQGDDEAQLIDENFCTSLEY 541

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 542 GLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 577


>gi|149197282|ref|ZP_01874334.1| lysyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149139828|gb|EDM28229.1| lysyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 492

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 17/259 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEW 69
                G  +R++G V  VR  G  +F  I+D  G  Q+ A+ +      F   K +    
Sbjct: 49  KEETEGQKLRVAGRVMTVRVMGKALFATIQDAEGRIQIYASRNEMEQLEFNRMKKMDIGD 108

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           ++ +DG +     E         +I +     ++LS A   PLP           R++ R
Sbjct: 109 IIGVDGELFKTKKE---------EITVRTATYKVLSKALR-PLPEKFHGLKDVETRYRQR 158

Query: 130 FLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +   + + + R  II++MR  +  ++++E  TP++        AR F+      
Sbjct: 159 YLDLISNEESRRVFRQRAAIISAMREYLEKDSYMEVETPMMHPIPGGASARPFVTHYNAL 218

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               + +  AP+ Y ++L+  GF+R F+I   FR+E       P EF  ++   ++ +  
Sbjct: 219 DQEMF-MRIAPELYLKMLLVGGFERVFEINRNFRNEGVSKQHNP-EFTAIEAYQAYGDCS 276

Query: 248 DILNTMENVLRGVFEEFSN 266
            +++ M+ ++R   ++   
Sbjct: 277 TMMDLMQGIIRHCAQKVIG 295



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 37/188 (19%)

Query: 400 FFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE-------KKI 452
             I      +     + R +IA+E+G         C I      +W EEE       KKI
Sbjct: 321 LLIEHTREDWFEITDEERANIAREMG---------CTI----MPDWTEEEITEEVYSKKI 367

Query: 453 D--------FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
           +            P  M        +  +L+ +    ++LVC+G E+A G    +     
Sbjct: 368 EPTLIQPTFVTKLPVHMVPLAKRCSENPELVDV----FELVCDGKELAPGYSELNDPIEQ 423

Query: 505 LQAFSNVGISKEVVENRFGG-----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
            Q         +  E    G        A + GMPP GG+  G+DR+VM+L GA  +R+V
Sbjct: 424 RQRLMAQFERAKGTEEEDSGRIDESFLTALEHGMPPAGGMGMGVDRLVMMLTGAPTIRDV 483

Query: 560 SLFPMSQN 567
            LFP  +N
Sbjct: 484 ILFPQLKN 491


>gi|291518461|emb|CBK73682.1| asparaginyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 466

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 65/373 (17%), Positives = 118/373 (31%), Gaps = 62/373 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73
               + ++GWV  +R      FL + D      V           F+    +     + +
Sbjct: 19  ADKEITVAGWVRNMRDSKTFGFLVLADGTFFNPVQVVFNQDKIDNFDEVCHLNVGAAVYV 78

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V                 E+ A K+ +   +     P+  +R   E +R     L  
Sbjct: 79  TGIVTLTPE-------AKQPFEIQATKVVVEGKS-TPDYPIQPKRHTMEYLR-TQTHLRP 129

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG---- 189
           R +T       R+    ++       +F+   TP++T S  EGA +    + ++      
Sbjct: 130 RTNTFQAVFRVRSLCAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQVTTMDLNNIPK 189

Query: 190 ----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+          Q      A  F   +   P FR E+  + R   EF+ 
Sbjct: 190 TDDGKVDFSQDFFGHATNLTVSGQLNGETYAQAFKNIYTFGPTFRAENSNTTRHAAEFWM 249

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL--------------------- 275
           ++ E+SF + +D +   E++L+ V             F                      
Sbjct: 250 IEPEISFADLEDDMILAEDMLKYVINYVLEHAPEEMQFFNSFVDKGLLERLQHVANSDFG 309

Query: 276 RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           RI Y DAI        +    +       TEH  +   ++F K + V    +        
Sbjct: 310 RITYTDAIAELEKHNDEFDYKVSWGCDLQTEHERYLTEKIFKKPVFVTDYPKEI------ 363

Query: 334 GGGNRAFCDRMNE 346
               +AF  ++NE
Sbjct: 364 ----KAFYMKLNE 372



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 52/139 (37%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P     +E K        F M           D  ++ A    LV    EI 
Sbjct: 352 KPVFVTDYP-----KEIK-------AFYMK-------LNEDGKTVAAMDC-LVPGIGEII 391

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+L+     G+     E  +       + G   H G   G +R VM L G
Sbjct: 392 GGSQREDDYDVLLKRMQECGLK----EEDYQFYLDLRKYGSSRHAGFGLGFERCVMYLTG 447

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP +   CDL
Sbjct: 448 MGNIRDVIPFPRTVGNCDL 466


>gi|89094634|ref|ZP_01167571.1| lysyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89081104|gb|EAR60339.1| lysyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 500

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 78/367 (21%), Positives = 149/367 (40%), Gaps = 41/367 (11%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   S  +L  ++ G  V ++G V   R      F  I+D  G  Q   N ++  F  
Sbjct: 46  EKYGDKSKEEL--AEAGIKVSIAGRVMLNRG----AFGVIQDMTGRIQFYVNKEARKF-- 97

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AKS+    ++ + G +       +  ++  G+ +L  + +  L        P   +    
Sbjct: 98  AKSLDLGDIIGVTGELHKSGKGDLYVDL--GEYQLLTKNLRPL--------PDKHKGLQD 147

Query: 122 ESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
             IR++ R++DL  +   + +   R++I++ +R  +    FIE  TP+L        AR 
Sbjct: 148 TEIRYRQRYVDLITNEDSRKVFEMRSKIVSGIRNYLTERRFIEAETPMLQVIPGGATARP 207

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++ 
Sbjct: 208 FITHHNALDRDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMIEF 265

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ +  D+++  E++LR V ++     T+ N  +R    + +  +     DL  P   
Sbjct: 266 YQAYADYRDLMDLTEDMLRTVAQDVLGTTTIVN-TVRNDEGEVLETFEY---DLEKPFRR 321

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V +  +H    + ++ L+        A         R   D  + W       GL  +
Sbjct: 322 ISVFDSILHYNEDITAEALADETAARQIA--------QRMDIDVKDSW-------GLGKV 366

Query: 360 FWRLDES 366
              + E 
Sbjct: 367 QIEIFEK 373



 Score = 97.4 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 7/156 (4%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
            AR  IAQ + I   + +    +     +E   E  ++D        P       + ND 
Sbjct: 345 AARQ-IAQRMDIDVKDSWGLGKV-QIEIFEKTVE-HRLDQPTFITEYPAEVSPLARRNDE 401

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQ 530
                 +++    G E+A+G    + SE   + F      K+  ++           A +
Sbjct: 402 NPFITDRFEFFVGGRELANGFSELNDSEDQAERFQQQVAEKDAGDDEAMHYDADYINALE 461

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+VML   + ++R+V LFP  +
Sbjct: 462 YGLPPTAGEGIGIDRLVMLFTDSPSIRDVILFPAMR 497


>gi|327312549|ref|YP_004327986.1| asparagine--tRNA ligase [Prevotella denticola F0289]
 gi|326944758|gb|AEA20643.1| asparagine--tRNA ligase [Prevotella denticola F0289]
          Length = 463

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 58/290 (20%), Positives = 114/290 (39%), Gaps = 26/290 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE 60
             RT     L  +D G  + + GWV   R    + F+ + D   I   QVV +P     E
Sbjct: 1   MKRTKVVDALACTDFGKDINVKGWVRSHRSSKAVDFIALNDGSTIKNIQVVVDPSKMDAE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             KS+ +   + + G ++    +   +       E+  ++IEI  +      P+  + + 
Sbjct: 61  ELKSITTGACISVVGTLVESQGKGQTS-------EIQCKEIEIYGLC-PSDYPMQKKGQS 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KY  + LR +T       R  +  ++        F    TP++T S  EGA + 
Sbjct: 113 FEYMR-KYGHMRLRTNTFGAVFRIRHNMAIAIHRYFHEHGFYYFHTPLITGSDAEGAGNM 171

Query: 181 LVPSRVNQG------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDP 225
              + ++               F+          Q +  L A+     +   P FR E+ 
Sbjct: 172 FQVTTLDLDRIAKSGKVDYNADFFGKRTNLTVSGQLEGELGATSLGAIYTFGPTFRAENS 231

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + R   EF+ ++ E++F+++D++++  E+ ++       +       FL
Sbjct: 232 NTPRHLAEFWMVEPEVAFIDKDELMDLEEDFIKFCVRWALDNCKDDLEFL 281



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 55/146 (37%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P      E K      NP        ++++G D+       
Sbjct: 338 HERYLVEEHFRRPVIMTDYP-----SEIKSFYMKKNP------DGKTMQGTDV------- 379

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G +R    + +L    + G+ +      +       + G  PHGG   
Sbjct: 380 --LFPRIGEIIGGSVREENYDKLLAEIDSRGMKR----EVYDWYLDTRKYGTCPHGGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G +N+R+V  F  +  
Sbjct: 434 GFERLILFVTGMQNIRDVIPFARTPK 459


>gi|258648093|ref|ZP_05735562.1| lysine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260851957|gb|EEX71826.1| lysine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 578

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/327 (20%), Positives = 124/327 (37%), Gaps = 20/327 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F +++D  G  QV    D  C    K + +     +  L  
Sbjct: 53  RTVCIAGRLMSRRVMGKASFAELQDSKGRIQVYITRDDICPSEDKELYNVVFKKLLDLGD 112

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFKYRFLD 132
               E       TG+I + AQK+  LS +      V  +            +R++ R++D
Sbjct: 113 FIGVEGYVFRTQTGEISVHAQKLTFLSKSIRPLPVVKEKDGEVYDGFSDPELRYRQRYVD 172

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +  + +   KR+ II ++R  +    + E  TPIL   +    AR F+         
Sbjct: 173 LIVNPDVKETFRKRSIIIKTLRDALDEAGYTEVETPILQPIAGGASARPFITHHNSLDID 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ + + + + ++
Sbjct: 233 LY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-EFTCMELYVQYKDYNWMM 290

Query: 251 NTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRRY-GTDKPDLRNPIIMH 300
           +  E++L  +    +                 + R+   +AIR   G D  D     I  
Sbjct: 291 SFTESLLERICIAVNGSTETVIDGKTISFKAPYRRLPILEAIREKTGYDLSDKNEDEIRA 350

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVW 327
              E  +  +  +    L      E  
Sbjct: 351 ICKELKMEIDETMGKGKLIDEIFGEFC 377



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 56/246 (22%), Positives = 93/246 (37%), Gaps = 57/246 (23%)

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG---IINCNCFEFC----- 435
            EAIR +      D       +  +  +   + +  I + +G   +I+    EFC     
Sbjct: 329 LEAIREKTGYDLSD------KNEDEIRAICKELKMEIDETMGKGKLIDEIFGEFCEGTFI 382

Query: 436 ---WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              +I D+P               +P T       +L           +++L+ NG E+A
Sbjct: 383 QPTFITDYP------------IEMSPLTKKHRDNPAL---------TERFELMVNGKELA 421

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVM 548
           +     +      + F +     E  ++          RA Q GMPP  GI  GIDR+VM
Sbjct: 422 NAYSELNDPIDQEERFQDQLRLSEKGDDEAMFIDQDFLRALQYGMPPTSGIGIGIDRLVM 481

Query: 549 LLLGAKNVREVSLFPMSQNFCDLLMGS---------PSTVSVEQLRELGLRIV-----EN 594
           L+ G   ++EV LFP  +   +    +         P  V    L++LG  +V     E 
Sbjct: 482 LMTGQSYIQEVLLFPTMRPEKNPPRDAVSAYTAIGIPEDVVP-VLQKLGYNLVSNLAEEK 540

Query: 595 PKKILK 600
           P+KI +
Sbjct: 541 PQKIQQ 546


>gi|228985294|ref|ZP_04145457.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228774449|gb|EEM22852.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 428

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A + 
Sbjct: 1   MKRSLTKEC----TKQGGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGY- 55

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G ++  +   +        +EL A ++++++ AE+LP  +  ++  
Sbjct: 56  ---KVDVESVVHVIGEIVETTKTEL-------GVELLAHEVKVINGAEKLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++  ++S    +   +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVLSLRHERIATIFKVKSTFVHSFSEFLAENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 224 ELGFIHDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 262



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     ++  
Sbjct: 293 GDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTMPNKENPAITD 341

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F+  G+      ++F      F+ 
Sbjct: 342 S---------FDLLYKGLEITSGAQRIHNYEMLLASFNEKGLHP----DKFQSYLNTFRY 388

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 389 GCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 422


>gi|86359247|ref|YP_471139.1| lysyl-tRNA synthetase protein [Rhizobium etli CFN 42]
 gi|123724720|sp|Q2K424|SYK_RHIEC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|86283349|gb|ABC92412.1| lysyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 498

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 61/292 (20%), Positives = 122/292 (41%), Gaps = 20/292 (6%)

Query: 2   HRYRTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +R+ +  +L     G          V ++G V+  R  G  +F+DI D  G  Q+ ++
Sbjct: 36  HFHRSLTNAELATRYEGLDPDVETQDIVTVAGRVYSSRNSG--MFMDIHDASGKIQIFSH 93

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D    E    +    +  I G+        I      G++ ++AQKIE+L+ +  LP+P
Sbjct: 94  KDVTGEEARALLPMIDIGDIIGV------TGIVRRTKRGELTINAQKIEMLTKSL-LPMP 146

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                     +R++ R LD+  +   K    +R++I++ +R  M  + F+E  TP+L + 
Sbjct: 147 EKWHGLSDIELRYRKRHLDILTNEDSKLRFQQRSKIVSGIRRFMENDGFMEVETPMLQSI 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLP 231
                 +              L  AP+ + +  + SG  D+ F+I   FR+E   +   P
Sbjct: 207 YGGATAEPFKTHHNTLKLDMYLRIAPELFLKRTLVSGLTDKVFEINRNFRNEGVSTRHNP 266

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
            EF  ++   ++ + +D+++ +E +   +               R+ +    
Sbjct: 267 -EFTMMECYWAYADYEDMMDLVERLFETLALSIHGTTEFDFGDKRLSFKGPF 317



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 7/133 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMS 501
           +E   E   I  +H   T     +           +   +++  CN +E+ +     +  
Sbjct: 368 FEEKVEATLIQPSH--VTHFPKDISPFAKEVPGEPRLVERFETYCNAWELGNAFSELNDP 425

Query: 502 EVMLQAFSNVGISKEVVENR----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   +              +          A   GMPP GG+  G+DR++MLL  A ++R
Sbjct: 426 EEQRRRMVEQLEQAHARGEKEKQLDEEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIR 485

Query: 558 EVSLFPMSQNFCD 570
           +V LFP  ++  D
Sbjct: 486 DVILFPARRSKAD 498


>gi|54298179|ref|YP_124548.1| asparaginyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|81370098|sp|Q5X300|SYN_LEGPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|53751964|emb|CAH13388.1| asparagine tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 467

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/392 (16%), Positives = 123/392 (31%), Gaps = 53/392 (13%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           G++    +   V + GWV   R    G+ F+ + D    + +            K V   
Sbjct: 13  GEIS---IDETVTVRGWVKTRRDSKAGLSFISLHDGSCFSPIQIVATDQLSNYHKEVTK- 68

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
                 G  M  + + + +       E+ A+ IE++   E         + +      + 
Sbjct: 69  ---LTAGCSMIATGKLVASQGKGQFFEIQAESIEVVGWVENPDTYPIQAKRHTLEFLREV 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +T+      R  +  ++      + F    TPI+TAS  EGA +    S ++ 
Sbjct: 126 AHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEGAGEMFRVSTLDL 185

Query: 189 --------------GSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+          Q           + +   P FR E+  + R  
Sbjct: 186 LNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMSKVYTFGPTFRAENSNTSRHL 245

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTV 270
            EF+ ++ E++F   +DI    +++LR + +                          +  
Sbjct: 246 AEFWMIEPEIAFANLEDICKLSQSMLRYLCKTVLEERADDMDFFNQFVAPGCIERMEHIA 305

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            + F  + Y DA++           P+   +   +EH  +      +++L   P      
Sbjct: 306 DSEFEIMTYTDAVKALEASDQKFEFPVSWGLDLQSEHERY-----LAEVLCKKPVIVTNY 360

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                G   R   D     A     PG+  I 
Sbjct: 361 PQEIKGFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 6/100 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    E++ +      ++K      +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEILDRRMDECNLNK----EHYQWYRDLRR 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G  PH G   G +R++  + G  NVR+V  FP +    D
Sbjct: 427 YGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRTPGHAD 466


>gi|86142116|ref|ZP_01060640.1| lysyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85831679|gb|EAQ50135.1| lysyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 564

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 63/313 (20%), Positives = 121/313 (38%), Gaps = 30/313 (9%)

Query: 7   HSCGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           H+   +    + G  V ++G +   R  G   F +++D  G  QV  N D  C    K+ 
Sbjct: 34  HTSAKIKQDFEDGKKVVIAGRLMSRRIQGKASFAELQDSTGRIQVYFNRDEICPGDDKTQ 93

Query: 66  RS--EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE- 122
            +     L   G  +    E     +  G+  +  +K  +LS A +       +++  E 
Sbjct: 94  YNDVYKKLLDIGDFIGIEGELFTTQV--GEKTVMVKKFTLLSKALKPLPLPKVDKDGNEF 151

Query: 123 ------SIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
                  +R++ R+ DL  +  +    VKRT++  +MR     + + E  TPIL +    
Sbjct: 152 DKFNDPEMRYRQRYADLVVNPKVKDVFVKRTKLFAAMRNFFNDKGYFEVETPILQSIPGG 211

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+          Y L  A + Y + L+  GFD  ++ +  FR+E       P EF
Sbjct: 212 AAARPFVTHHNALDIPLY-LRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EF 269

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
             +++ +++ + + ++   E +L       +     +              +G  K D +
Sbjct: 270 TAMEIYVAYKDYNWMMAFTEKLLEHCATAVNGTTEAT--------------FGEHKVDFK 315

Query: 295 NPIIMHNVTEHFV 307
            P     +T+   
Sbjct: 316 APYKRVTMTDAIK 328



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 5/123 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 373 EGNFIQPTFITDYPKEMSPLCKEHRENPELTERFELMVCGKEIANAYSELNDPIDQRERF 432

Query: 509 SNVGISKEVVENRF-----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                     ++           RA + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 433 EEQLKLAAKGDDEATEFIDQDFLRALEYGMPPTSGLGIGMDRLIMFLTNNQSIQEVLFFP 492

Query: 564 MSQ 566
             +
Sbjct: 493 QMK 495


>gi|126173118|ref|YP_001049267.1| lysyl-tRNA synthetase [Shewanella baltica OS155]
 gi|153002000|ref|YP_001367681.1| lysyl-tRNA synthetase [Shewanella baltica OS185]
 gi|160876720|ref|YP_001556036.1| lysyl-tRNA synthetase [Shewanella baltica OS195]
 gi|217974575|ref|YP_002359326.1| lysyl-tRNA synthetase [Shewanella baltica OS223]
 gi|304410530|ref|ZP_07392148.1| lysyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307304623|ref|ZP_07584373.1| lysyl-tRNA synthetase [Shewanella baltica BA175]
 gi|166229825|sp|A3D0Y5|SYK_SHEB5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229826|sp|A6WS29|SYK_SHEB8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189082968|sp|A9L1I0|SYK_SHEB9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|125996323|gb|ABN60398.1| lysyl-tRNA synthetase [Shewanella baltica OS155]
 gi|151366618|gb|ABS09618.1| lysyl-tRNA synthetase [Shewanella baltica OS185]
 gi|160862242|gb|ABX50776.1| lysyl-tRNA synthetase [Shewanella baltica OS195]
 gi|217499710|gb|ACK47903.1| lysyl-tRNA synthetase [Shewanella baltica OS223]
 gi|304351014|gb|EFM15414.1| lysyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306912025|gb|EFN42449.1| lysyl-tRNA synthetase [Shewanella baltica BA175]
 gi|315268920|gb|ADT95773.1| lysyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 500

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 66/311 (21%), Positives = 132/311 (42%), Gaps = 35/311 (11%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   +L              +G    ++G +   R      FL I+D  G  Q  A  
Sbjct: 37  RTHKAAELQAQYGQNTKEELEALGFKTSIAGRIMAKRGP----FLVIQDVSGRIQAYAEK 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                     ++  +     G ++  + +   +    G + ++ ++ E+L+ A   PLP 
Sbjct: 93  SVQA-----DLKERFQGLDIGDIIGVTGQLHLSG--KGDLYVNMEQYELLTKALR-PLPA 144

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R++DL  +   +N  + R+++++++R  MI + F+E  TP++    
Sbjct: 145 DYYGLADQEMRYRQRYVDLIVNEDSRNAFIMRSKVVSAIRNFMIKKEFMEVETPMMHVIP 204

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 205 GGASARPFITHHNALDMPMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNP 262

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  ++  M++ +  D+++  E +L  +  E      +            + R+   +AI
Sbjct: 263 EFTMMEFYMAYADYKDLMDLTEEMLSSIAIELLGSAQMPYGEHTVDFGGPYARLSMLEAI 322

Query: 284 RRYGTDKPDLR 294
           ++Y  D   ++
Sbjct: 323 QKYNPDNATIQ 333



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 6/122 (4%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML 505
           E  +       F        S     ND       +++    G E+A+G    + +E   
Sbjct: 373 ETAEWQLMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVANGFSELNDAEDQD 432

Query: 506 QAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
             F     +K+  ++           A + G+PP  G   GIDR+VML      +R+V L
Sbjct: 433 NRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 562 FP 563
           FP
Sbjct: 493 FP 494


>gi|325116898|emb|CBZ52451.1| hypothetical protein NCLIV_022400 [Neospora caninum Liverpool]
          Length = 549

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 138/376 (36%), Gaps = 49/376 (13%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SACFEIAKSVRSEWVL 71
            VG  V + G V   R  G + FL +R+     Q V +          +   S+  E V+
Sbjct: 101 HVGETVWIRGRVQESRGKGSVAFLMLRERQATVQGVLDAKRGNSKDMIKWTTSLPLESVV 160

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES-------- 123
            + G V+    E  + +     +E+  +KI  +S A +       +   PE         
Sbjct: 161 DVQGEVVKPEVEIQSTSQK--GVEVLVKKIFCVSKAAQELPFQLRDAMRPEDGTEGGIRV 218

Query: 124 ---IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R   R LDLR          ++  I   R  ++   F+E  +P L   + EG    
Sbjct: 219 NMDTRLDNRILDLRTPVNQAIFRIQSETIQLFREFLLTNKFVELHSPKLIGGASEGGASC 278

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 N+ +   L Q+PQ YKQ+ M + F+R F+I P FR E+  + R   EF  LD+E
Sbjct: 279 FTLKYFNRDA--CLAQSPQLYKQMAMCADFERVFEIGPVFRAENSNTHRHLCEFTGLDLE 336

Query: 241 MSFVEQD-DILNTMENVLRGVFE----------EFSNGNTVSNNFLRI------------ 277
           M+F E   ++L+ ++ + + +F+          +  +    +  F  I            
Sbjct: 337 MTFKEHYSEVLDVLDELFKFIFKGLSERCKKEIDIFHQQYPAEPFTWIEETPRLSFSEGV 396

Query: 278 -------CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
                  C +        D    +  ++   V E +    + +    L V P Y +    
Sbjct: 397 QMLREAGCANIPDDISEFDLSTEQEKMLGRLVKEKYKTDFYMLLQYPLKVRPFYTMPDPH 456

Query: 331 AKGGGGNRAFCDRMNE 346
            K    +  F  R  E
Sbjct: 457 NKMFSNSYDFFMRNEE 472



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 60/157 (38%), Gaps = 22/157 (14%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           D      + LG +    ++     DF          +      PF               
Sbjct: 415 DLSTEQEKMLGRLVKEKYK----TDFYML------LQYPLKVRPFYTMPD--------PH 456

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             + +  YD      EI SG  R H ++++ Q     G+    ++        +F+ G  
Sbjct: 457 NKMFSNSYDFFMRNEEIISGAQRVHDADLLTQRCLECGVPPSSIQT----YIDSFRLGTA 512

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PHGG   G++R+VML LGAKN+R+VSLFP        
Sbjct: 513 PHGGAGIGLERVVMLFLGAKNIRQVSLFPRDPKRLTP 549


>gi|126305063|ref|XP_001378960.1| PREDICTED: similar to lysyl-tRNA synthetase [Monodelphis domestica]
          Length = 604

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 63/276 (22%), Positives = 113/276 (40%), Gaps = 15/276 (5%)

Query: 6   THSCGDLGVSDVGS-----FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           TH          G       VR++G +H  R  G  +IF D+R      QV+AN  S  F
Sbjct: 113 THFIEQYNNLQPGDHLTDITVRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRDF 170

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  +           G +              G++ L   +I +LS      LP      
Sbjct: 171 KSEEEFFPINNKLPRGDIFGVPGNP--GRTKRGELSLIPHEITLLSPCL-HMLPHLHFGL 227

Query: 120 YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
             +  R++ R+LDL  +   +   + R++II  +R  +    F+E  TP++        A
Sbjct: 228 KDKETRYRQRYLDLILNDFVRQKFITRSKIITYIRSFLDELGFLEIETPMMNVIPGGAVA 287

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   
Sbjct: 288 KPFITYHNELDMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTC 345

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +  M++ +  D++   E ++ G+ +  +    VS +
Sbjct: 346 EFYMAYADYHDLMEITEKMISGMVKNITGSYKVSYH 381



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
            +    +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 486 KNGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMVIDDNFCTALE 545

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 546 YGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMK 581


>gi|300812103|ref|ZP_07092551.1| lysine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496942|gb|EFK32016.1| lysine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 507

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 78/419 (18%), Positives = 153/419 (36%), Gaps = 33/419 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +++G +   R  G + F D+ D  G  Q+    D    E  +  +   +    G  +   
Sbjct: 61  KIAGRMLAKRGKGKVGFADLYDRSGKIQIYVRKDMVGEENYQIFKKADL----GDFLGVE 116

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH-K 140
            E       +G++ + AQ +  LS A   PLP            ++ R+LDL  +    +
Sbjct: 117 GEVF--KTDSGELSVRAQHVTFLSKALR-PLPDKYHGLKDVESIYRQRYLDLITNHESYQ 173

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
             V RT+II ++R  +  ++F+E  TP+L        AR F+        + Y +  A +
Sbjct: 174 RFVNRTKIIQAIRDYLNGQDFLEVETPVLHNIPGGAEARPFITHHNALDINLY-MRIALE 232

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+    +R ++I   FR+E       P EF +L+   ++ +  D+++  E ++R 
Sbjct: 233 LPLKRLIVGDMERVYEIGRVFRNEGMDLKHNP-EFTELETYAAYYDFHDVMDEAEGIIRA 291

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
             +                 D  I   GTD  DL  P    ++ +         F + ++
Sbjct: 292 AAKVV-------------SEDGKINYQGTDL-DLGKPFRRVHMVDLIKELTGVDFWQPMT 337

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
           +    +V A               +N +    G+  +    +     G+   + P+AK  
Sbjct: 338 LEEARKVAAEHHVEVEPYWQVGHIINAFFEEFGEKTIVDPTFVY---GHPVEVSPLAKKN 394

Query: 380 NIVNTEAIRVR---LDMQDGDSCFFIAG--DPLKFCSFAADARNHIAQELGIINCNCFE 433
                   R     +  + G++   +    D  +        R+    E  II+ +   
Sbjct: 395 ADDPRFTDRFEIFIMGNEYGNAFSELNDPLDQRERFEAQMAERDAGNDEADIIDEDYLR 453



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 63/349 (18%), Positives = 118/349 (33%), Gaps = 28/349 (8%)

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGV-FEEF-----SNGNTVSNNFLRICYDDA 282
           R        +    FV +  I+  + + L G  F E       N    +     I + +A
Sbjct: 161 RYLDLITNHESYQRFVNRTKIIQAIRDYLNGQDFLEVETPVLHNIPGGAEARPFITHHNA 220

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +      +  L  P+    V +     E     +   ++  +       +       F D
Sbjct: 221 LDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNEGMDLKHNPEFTELETYAAYYDFHD 280

Query: 343 RMNEWARSQGQPGLAYIFWRL-DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
            M+E        G+     ++  E G +   G        ++      R+ M   D    
Sbjct: 281 VMDE------AEGIIRAAAKVVSEDGKINYQG------TDLDLGKPFRRVHMV--DLIKE 326

Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
           + G          +AR  +A E  +     ++   I++  F+E   E+  +D        
Sbjct: 327 LTGVDFWQPMTLEEAR-KVAAEHHVEVEPYWQVGHIINA-FFEEFGEKTIVDPTFVYGHP 384

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
            +    + K  D       ++++   G E  +     +      + F      ++   + 
Sbjct: 385 VEVSPLAKKNAD-DPRFTDRFEIFIMGNEYGNAFSELNDPLDQRERFEAQMAERDAGNDE 443

Query: 522 FG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                    RA + GMPP GG+  GIDR+VMLL  A ++R+V LFP  +
Sbjct: 444 ADIIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTNAASIRDVLLFPTMR 492


>gi|238792377|ref|ZP_04636011.1| Asparaginyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238728303|gb|EEQ19823.1| Asparaginyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 466

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 140/424 (33%), Gaps = 50/424 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSE 68
           G + V S V + GWV   R    GI F+ + D      + A  ++      +    + + 
Sbjct: 12  GRAAVDSEVTVRGWVRTRRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTTG 71

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G V++   E  +        E+ A  I+++   ++        + +      + 
Sbjct: 72  CSVEVTGTVVASPGEGQS-------FEIQATAIKVVGWVDDPDTYPMAAKRHSIEYLREV 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R + +      R  +  ++        +   STP++TAS  EGA +    S ++ 
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 189 --------------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q      AS   + +   P FR E+  + R  
Sbjct: 185 ENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYASALSKVYTFGPTFRAENSNTSRHL 244

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTD 289
            EF+ ++ E++F   DD+    E +L+ VF+   N       F   R+  D   R     
Sbjct: 245 AEFWMVEPEVAFASLDDVAALAEKMLKYVFQAVLNERADDMKFFAERVDKDAVDRLQRFV 304

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKI------------LSVNPGYEVWAIPAKGGGGN 337
             D    +   +  E  + S  +  + +                  ++   +        
Sbjct: 305 TSDFAQ-VDYTDAIEILLASGQKFENDVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI 363

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           +AF  RMNE        G       +   G    +G   +   +   +A    + +   D
Sbjct: 364 KAFYMRMNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKED 416

Query: 398 SCFF 401
             ++
Sbjct: 417 YWWY 420



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    +V+   
Sbjct: 347 EKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDAR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + +G++K      +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 407 LAEMGLNK----EDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRTPR 462


>gi|320107678|ref|YP_004183268.1| lysyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319926199|gb|ADV83274.1| lysyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 561

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 55/276 (19%), Positives = 106/276 (38%), Gaps = 26/276 (9%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +  +R  G   F  ++ +    Q+    D+    + +   + + L   G  + 
Sbjct: 85  EVSVAGRIMAIRAQGKAGFAQLQQNGVRLQIYVRQDA----VGERAYAMYKLMDLGDHVG 140

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-- 137
                      T ++ +   ++  LS A  LPLP          +R++ R++DL  DT  
Sbjct: 141 VKGYLFRTR--TNELSVHVTELTFLSKA-MLPLPDKFHGLEDVELRYRQRYVDLFSDTGD 197

Query: 138 --------------LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182
                              VKR  ++ ++R       +IE  TP++   +    AR F  
Sbjct: 198 FEGEGEEAKQTRLPARDVFVKRAAVLRALRKFFDDRGYIEVETPMMQPVAGGAAARPFTT 257

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    + L  AP+ Y + L+  G DR ++I   FR+E   +   P EF  L+   +
Sbjct: 258 HHNALDLDLF-LRIAPELYLKRLVVGGMDRVYEINRNFRNEGVSTRHNP-EFTMLEFYQA 315

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
           +    D++   E+++  V +E +     +     I 
Sbjct: 316 YANYHDLMQITEDLVSFVAKEVNGTTITNFGGHEID 351



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 55/163 (33%), Gaps = 26/163 (15%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           I   +  +   I DFP             A +P +  +                 +++  
Sbjct: 420 ITEEHLIQPTIIYDFPL------------AVSPLSKVKPDEPEW---------VERFEFY 458

Query: 486 CNGFEIASGGIRNHMSEVMLQAFS----NVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             GFE+ +     +        F           +          RA   G+PP GG   
Sbjct: 459 IGGFEVGNAFSELNDPVDQRARFEAQLGERERGDDEAHQMDADYVRALSYGLPPTGGEGI 518

Query: 542 GIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQ 583
           GIDR+ M+L GAK++R+V LFP +      +L  S       Q
Sbjct: 519 GIDRLTMVLTGAKSIRDVILFPLLRPQAKVILTASEEESGPAQ 561


>gi|237752509|ref|ZP_04582989.1| lysyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375998|gb|EEO26089.1| lysyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 500

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 66/285 (23%), Positives = 127/285 (44%), Gaps = 23/285 (8%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLC 72
            D     +++G +  +R  G   F+ I D+ G+ QV  + +     FE+ K       + 
Sbjct: 53  KDTSKSAQVAGRIKFIRLMGKAAFIKIEDYSGVLQVYLSKNELDENFEVFKKY-----IE 107

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           +  +V+   A+       TG++ L A + +IL+ A   PLP          +R++ R+LD
Sbjct: 108 VGDIVV---AKGFPFVTKTGELSLHALEFKILTKAIS-PLPEKFHGLVDIELRYRQRYLD 163

Query: 133 LRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +  +  + + R+RI++ +R    ++ F+E  TP++        A+ F+         
Sbjct: 164 LIMNSKVRDSFILRSRIVSCVRKFFESKEFLEVETPMMHPIPGGANAKPFVTYHNALNVE 223

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++ +  D++
Sbjct: 224 RY-LRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYKDYKDLI 281

Query: 251 NTMENVLRGVFE--------EFSNGNTVSNNFLRICYDDAIRRYG 287
              + +   + E        EF+  +   + F  I Y+DA+   G
Sbjct: 282 ALTKELFYFLLEMLKLPKQLEFNGKSIDFSTFREISYEDALVEIG 326



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/141 (26%), Positives = 54/141 (38%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +        +I DFP             A +P             ND     A +++L  
Sbjct: 368 VEEKLINPTFITDFP------------IAISPLARR---------NDTNPYIADRFELFI 406

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAG 542
            G EIA+G    +     L+ F     +KE  +            A   GMPP  G   G
Sbjct: 407 GGSEIANGFSELNDPLDQLERFKAQVAAKEAGDEEAQYMDEDYITALSYGMPPTAGEGIG 466

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR+VMLL G  ++++V LFP
Sbjct: 467 IDRLVMLLTGNISIKDVILFP 487


>gi|90580578|ref|ZP_01236383.1| lysyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438236|gb|EAS63422.1| lysyl-tRNA synthetase [Photobacterium angustum S14]
          Length = 501

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/303 (21%), Positives = 137/303 (45%), Gaps = 27/303 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   +  +L   + G    ++G +   R      FL I+D  G  Q  A+ D     + 
Sbjct: 47  KYGEMTKEEL--EEAGHVFAIAGRIMAKRGP----FLAIQDVSGRIQAYASKD-----VQ 95

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K ++ ++     G ++        +    G + ++  + E+L+ A   PLP        +
Sbjct: 96  KELKEKYSGLDIGDIIGIKGALHKSG--KGDLYVNMDEYELLTKALR-PLPEKFHGLTDQ 152

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
            +R++ R++DL  +   ++  V R+++++++R  M+ + F+E  TP++        AR F
Sbjct: 153 EMRYRQRYVDLIVNDDSRHAFVVRSKVVSAIRSFMVTKGFMEVETPMMHVIPGGATARPF 212

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++  
Sbjct: 213 ITHHNALDIDMY-LRVAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNPEFTMMEFY 270

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKP 291
           M++ + +D+++  E +L  +  +    + +            + R+   DAI++Y  +  
Sbjct: 271 MAYADYNDLMDLTEEMLSSIAIDVLGSSKMPYGEFEVEFAGPYTRMSMLDAIKQYNPEHA 330

Query: 292 DLR 294
           +++
Sbjct: 331 EIQ 333



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 6/114 (5%)

Query: 459 FTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F        S     ND       +++    G E+A+G    + ++   Q F     +K+
Sbjct: 384 FITEYPADISPLARRNDENPFITDRFEFFIGGREVANGFSELNDAQDQDQRFKAQVDAKD 443

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             ++           A + G+PP  G   GIDR+VML      +R+V LFP  +
Sbjct: 444 AGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFPAMR 497


>gi|116620161|ref|YP_822317.1| lysyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|116223323|gb|ABJ82032.1| lysyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 501

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 118/280 (42%), Gaps = 14/280 (5%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y   +  +L        VR++G +  +R  G   F  ++ +    Q+    D+       
Sbjct: 43  YGAKTAEELAPEV---RVRVAGRLMTLRHMGKAGFAHLQQNGERLQIYVKKDAVGERDYA 99

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             +   +  I G+      E       TG++ + A+K+E LS    L +P          
Sbjct: 100 LFKLIDLGDIVGV------EGYLFRTRTGELSIHAEKLEFLSKTL-LSMPEKWHGLEDVE 152

Query: 124 IRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL  +  + K  V R +II+S+R ++ A NFIE  TP++        AR F+
Sbjct: 153 TRYRQRYLDLIANADVRKVFVTRAKIISSLRRQLEARNFIEVETPMMQPLYGGAAARPFV 212

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  G +R ++I   FR+E   +   P EF  L+   
Sbjct: 213 THHNTLDIDLY-LRIAPELYLKRLVVGGMERVYEINRNFRNEGLSTHHNP-EFTMLEFYQ 270

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
           ++ +   +++  E +LR    + +    V     +I +  
Sbjct: 271 AYTDYRGLIDFSEELLRQAAIDATGSPVVEFEGHQIDFSC 310



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+      +  P       K          ++++   G EI +     +  +   + F
Sbjct: 363 EDKLIQPTVIYDYPVETSPLSKNKPEDPAFVERFEIYAAGMEIGNAYTELNDPQEQRRRF 422

Query: 509 SNV----GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                      E          RA   GMPP GG   GIDR+ M+L G++++R+V LFP
Sbjct: 423 EMQIGMRERGDEEAHQMDEDYVRALAYGMPPTGGEGIGIDRLTMILTGSRSIRDVILFP 481


>gi|219684771|ref|ZP_03539713.1| asparaginyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219671716|gb|EED28771.1| asparaginyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 462

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/374 (17%), Positives = 135/374 (36%), Gaps = 54/374 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +  + A      +    +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFTEKDLKKLTTGASIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTYSFNVIGETDSKTYPLQKKRHTFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------ 186
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKPN 185

Query: 187 -------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NSLSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR--------------ICYDDA 282
           ++ EM+F + +D ++  E++L+ +     N  +   +FL               I  +  
Sbjct: 246 IEPEMAFCKLNDNISLAEDLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFE 305

Query: 283 IRRYGTDKPDLRNPIIMHNV---------TEHFVHSEFRVFSK---ILSVNPGYEVWAIP 330
           +  Y      L N   + ++         T+H  +    +F K   ++     ++ + + 
Sbjct: 306 VITYTKAIAILENSKKIFDIKPCWGIDLQTDHERYLTEEIFKKPVVVIDYPKNFKAFYMK 365

Query: 331 AKGGGGNRAFCDRM 344
                      D +
Sbjct: 366 INKDNKTVKGMDIL 379



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 379 LVPRIGEIIGGSEREDDLQKLENRIKELNLNI----EHLNWYLDLRRFGSTPHSGFGLGL 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V    G  N+R+   FP +  
Sbjct: 435 ERLVQYTTGISNIRDSIPFPRTPK 458


>gi|148981823|ref|ZP_01816540.1| lysyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145960731|gb|EDK26071.1| lysyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 505

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 66/311 (21%), Positives = 134/311 (43%), Gaps = 35/311 (11%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H  GDL             ++   V ++G V   R      FL I++  G  Q  A  
Sbjct: 42  REHLAGDLQAEFGEKTKEELEELNHVVAIAGRVMAKRGP----FLAIQETSGRIQAYAAK 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     + K ++ ++     G ++        +    G + ++ ++ E+L+ A   PLP 
Sbjct: 98  D-----VQKVLKEQYQGLDIGDIIGVKGALHKSG--KGDLYVNMEEFELLTKALR-PLPE 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R++DL  +   +N  + R+++++S+R  M ++ ++E  TP++    
Sbjct: 150 KFHGLTDQEMRYRQRYVDLIVNEDSRNAFIVRSKLVSSIRNFMSSKGYLEVETPMMHVIP 209

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   
Sbjct: 210 GGATARPFITHHNALDIDMY-LRVAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNP 267

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  ++   ++ +  D+++  E +L     +     ++            + R+   +AI
Sbjct: 268 EFTMMEFYQAYSDYKDLMDLTEEMLSTAAMDVLGSTSMPYGDETVEFGGKYARMSMFEAI 327

Query: 284 RRYGTDKPDLR 294
           + Y  +  +++
Sbjct: 328 KHYNPEHAEIQ 338



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E ++         P       + +D       +++    G E+A+G    + +E   + F
Sbjct: 381 EPQLIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDERF 440

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K+  ++           A + G+PP  G   GIDR+ ML      +R+V LFP 
Sbjct: 441 KAQVNAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFPA 500

Query: 565 SQ 566
            +
Sbjct: 501 MR 502


>gi|1001357|dbj|BAA10844.1| asparaginyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 513

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 70/386 (18%), Positives = 130/386 (33%), Gaps = 49/386 (12%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M++ R      L        V + GW+   R      F+++ D   +  +    D +  +
Sbjct: 52  MNKRR--IIEVLRHGQADDQVMVQGWLRTKRTLKDFSFVEVNDGSSLANLQVVLDGSLAD 109

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +         G  +    +   +     ++EL A K+E+L  A+    P+  +R  
Sbjct: 110 YDRLL----SQLQTGAALVVEGKLAPSPGKGQRVELKATKLELLGGADPGSYPLQKKRHS 165

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R     L  R +T+   +  R     ++        F+   TPI+TAS  EGA D 
Sbjct: 166 FEFLR-TIGHLRPRTNTIGAVMRVRNACATAIHQFFQERGFLWVHTPIITASDCEGAGDL 224

Query: 181 LVPSRVNQG-------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
              + ++                F+   A      Q +  +MA  F   +   P FR E+
Sbjct: 225 FKVTTLDLQRVPKNGEGIDYSQDFFGKQAYLTVSGQLEAEVMALAFQNVYTFGPTFRAEN 284

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------- 271
             + R   EF+ ++ EM+F + +      E  L+ +F+                      
Sbjct: 285 SNTSRHLAEFWMVEPEMAFCDLEGDRQWAEEFLKYIFKFVLEKCPEDMEFFDQRIDNTVL 344

Query: 272 --------NNFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSV- 320
                   N F  + Y +AI+           P+       +EH  +    VF +   V 
Sbjct: 345 ATADNIINNEFAWLTYSEAIKLLEKADQKFEYPVAWGVDLQSEHERYLAETVFKRPTIVT 404

Query: 321 --NPGYEVWAIPAKGGGGNRAFCDRM 344
                 + + +     G   A  D +
Sbjct: 405 DYPKDIKAFYMRLNDDGKTVAAMDIL 430



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 4/95 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    L     EI  G  R    +++ Q     G+     E          + 
Sbjct: 418 NDDGKTVAAMDILAPKIGEIIGGSQREERLDILTQRMQEQGVP----EEDLWWYLDLRRY 473

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G  PH G   G +RIV  + G  N+R+V  FP + 
Sbjct: 474 GSVPHAGFGLGFERIVQFMTGMANIRDVIPFPRTP 508


>gi|157866772|ref|XP_001681941.1| lysyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68125392|emb|CAJ03251.1| putative lysyl-tRNA synthetase [Leishmania major strain Friedlin]
          Length = 586

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 108/595 (18%), Positives = 179/595 (30%), Gaps = 120/595 (20%)

Query: 3   RYRTHSCGDLGVSD--VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVAN-----P 54
           +YR      L   D  +   V ++G +   R  G  + F+ I+    I QV++       
Sbjct: 93  QYRRKYAPLLTEPDTSLDETVTIAGRIINKRSSGSKLHFITIQGDMEIVQVISALTEYID 152

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            S   EI   ++   ++ I G           +   + +  L A +I +LS      LP 
Sbjct: 153 QSKFAEIHSKLKRGDIIGIAG---------KPSLSKSNEFSLKATEITLLSTCY-HMLPD 202

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                     RF+ R+LD   +    K  ++R  II  +R      +F+E  TP+L   +
Sbjct: 203 DYFGLSSFEQRFRQRYLDFIVNRDNIKTFIQRANIIKYIRKFFDERDFVEVETPVLNQIA 262

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    V    +      L  AP+ Y + L+  G DR ++I                 
Sbjct: 263 GGAAARPFVTHHNDLNQTMFLRIAPELYLKELVVGGMDRVYEIG---------------- 306

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
                                       ++F N      +       +A   Y  D  D 
Sbjct: 307 ----------------------------KQFRNEGIDLTHNPEFTSCEAYWAY-MDYHD- 336

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
                    TE  ++      +  L  +P        ++G     A  +    + R    
Sbjct: 337 -----WMTATEDLLYG----LAVELHGSPIVRYAPKDSEGKPLPEATFNFSKPFKRLHII 387

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
           P L            +          +    + +         D        P       
Sbjct: 388 PEL---------EKRLKVSFDNVDFESDAGIQFLMDLCKKHKAD-----CPPPYTAPRLL 433

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                 IA+ L      C + C+I D P                        +     ND
Sbjct: 434 DAL---IAEFL---EPECHDPCFICDHP-------------------RVMSPLAKWHRND 468

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVM----LQAFSNVGISKEVVENRFGGLYRAF 529
                  +++L  N  E+A+     +   V     L+   N     +       G   A 
Sbjct: 469 PR--LTERFELFVNKKELANAYTELNNPIVQREEFLKQVRNRDKGDDESMEIDEGFVAAL 526

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQ 583
           +  +PP GG   GIDR+VM L    N++EV LFP M     + +   P T+   Q
Sbjct: 527 EHALPPTGGWGLGIDRLVMFLTSQSNIKEVLLFPAMKPEGKNAISYPPGTMLNGQ 581


>gi|320335053|ref|YP_004171764.1| Lysyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319756342|gb|ADV68099.1| Lysyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 507

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/297 (22%), Positives = 119/297 (40%), Gaps = 27/297 (9%)

Query: 2   HRY---RTHSCGDLGVSDV----GSFV-----RLSGWVHRVRPHGGIIFLDIRDHYGITQ 49
           H Y   +TH   D+  +      G         L+G +  +R  G   F D++D  G  Q
Sbjct: 35  HPYSYPKTHGAADVLAAHPQVEPGQEWPEETYALAGRITLMRHMGKAAFADLQDERGKIQ 94

Query: 50  VVANP-DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
           +  +  D+A FE  K +    ++ + G               TGQ+ L     + L  + 
Sbjct: 95  LHFSKQDTADFEATKKLDLGDIVGVTG---------FPFVTRTGQLTLRVTAWQPLVKSL 145

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTP 167
             PLP        E +R + R+LDL      +     R+R+I  +R  +  + F+E   P
Sbjct: 146 -HPLPSKFHGLQDEELRARRRYLDLMVTEGAREKFLARSRMIRFIRNTLDQQGFVEVEGP 204

Query: 168 ILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
            L  ++    AR F+         F  L  + + Y + L+  GF++ ++I   +R+E   
Sbjct: 205 TLQVTAGGAEARPFMTHHNALSHDF-KLRISLELYLKRLLVGGFEKVYEIGRVYRNEGID 263

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
               P EF  L++  ++V+  DI   +E++L G+  E     T       + +    
Sbjct: 264 RTHNP-EFTMLELYWAYVDYSDIAKLVEDLLSGLAREVHGSYTFEYGGRTLDFTPPF 319



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 17/171 (9%)

Query: 410 CSFAADARNHIAQ-ELGIIN-------CNCFEFCW--IMDFPFYEWNEEEKKIDFAHNP- 458
             +    R H+   +   ++       C+     W  + D+   +    E       NP 
Sbjct: 322 VDYLGGLREHVPDLDFDPLDFEKLRAYCDERHPEWRKVPDYKLLDKLFGEYVEPLLTNPT 381

Query: 459 FTMPQGGMESLKGNDLLS--IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F M    + S              ++++ C+GFE+A+     + +    + F      ++
Sbjct: 382 FVMDHPVVISPLAKKHREREGVTERFEVFCSGFELANAFSELNDALDQRERFEAQSQRRD 441

Query: 517 ----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                   +      A + GMPP GG+  GIDR+ MLL G+ ++R+V LFP
Sbjct: 442 AGDDEAHAQDEDFLLALEYGMPPAGGLGIGIDRLAMLLTGSDSIRDVLLFP 492


>gi|86157505|ref|YP_464290.1| lysyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|123723269|sp|Q2IPX5|SYK_ANADE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|85774016|gb|ABC80853.1| lysyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 513

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 13/249 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            L+G V  VR  G   FL +RD     QV    D    +  +  +   +  I G      
Sbjct: 64  SLAGRVLAVRSFGKAAFLRVRDRSAELQVWVKKDRVGDQAFEVFKLLDIGDIVG------ 117

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHK 140
           AE       TG++ L A+   IL+ A   PLP           R++ R++DL     + +
Sbjct: 118 AEGPATRTKTGELTLEARTFTILTKA-TRPLPEKWHGLTDVEQRYRQRYVDLVVTPGVRE 176

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA---SSPEGARDFLVPSRVNQGSFYALPQA 197
             VKR RI++ +R  + A  ++E  TP L     +    AR F             L  A
Sbjct: 177 AFVKRARIVSGIRRFLDARGYLEVETPTLHKPEEAGGAAARPFETHHNALDLDL-KLRIA 235

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            + + + L+  G DR ++I   +R+E     R   EF  ++   ++   +D++   E ++
Sbjct: 236 TELHLKRLVVGGLDRVYEIGRIWRNEGID-RRHNPEFTSIEFYQAYATHEDLMRLTEELM 294

Query: 258 RGVFEEFSN 266
             +  E + 
Sbjct: 295 HQLAVEVTG 303


>gi|150006819|ref|YP_001301562.1| lysyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|166229813|sp|A6L8C6|SYK_PARD8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|149935243|gb|ABR41940.1| lysyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 576

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 63/332 (18%), Positives = 130/332 (39%), Gaps = 22/332 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV  + D  C +  K   +     +  +    
Sbjct: 55  VSIAGRIMSRRIMGKASFMELQDSEGRIQVYISRDDICPDENKDTYNVVFKKLLDIGDFV 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFLDLR 134
             +        G+I + AQ++ +LS +      V  +            +R++ R++DL 
Sbjct: 115 GIKGFVFRTQMGEISVHAQELTVLSKSLRPLPVVKYKDGVAYDGFNDPELRYRQRYVDLV 174

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            +  +    +KR  II +MR  +    + E  TPIL + +    AR F+          Y
Sbjct: 175 VNEGVKDIFMKRAAIIKTMRTALDEAGYTEVETPILQSIAGGASARPFITHHNSLDIDLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + +++ 
Sbjct: 235 -LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMELYVQYKDYNWMMSF 292

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            E +L  +    +  +  + +   I +    R         R PI+     +     E +
Sbjct: 293 TEKLLERICIAVNGTSESTIDGKTISFKAPFR---------RLPILEAIKEKTGYDLEGK 343

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
              +I ++    ++      G G      D +
Sbjct: 344 TEDEIRAICKELKMEIDDTMGKG---KLIDEI 372



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 81/236 (34%), Gaps = 40/236 (16%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W  S  +  L  I   ++ +      G             I   +  + G D       +
Sbjct: 288 WMMSFTEKLLERICIAVNGTSESTIDGKTISFKAPFRRLPILEAIKEKTGYDLEGKTEDE 347

Query: 406 PLKFCSFAADARNHIAQELG---IINCNCFEFC--------WIMDFPFYEWNEEEKKIDF 454
               C    + +  I   +G   +I+    EFC        +I+D+P             
Sbjct: 348 IRAICK---ELKMEIDDTMGKGKLIDEIFGEFCEGTFIQPTFIIDYP------------V 392

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             +P T        L           +++L+ NG E+A+     +      + F      
Sbjct: 393 EMSPLTKMHRSKPGL---------TERFELMVNGKELANAYSELNDPIDQEERFKEQLRL 443

Query: 515 KEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            E  ++          RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP  +
Sbjct: 444 SEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLVMLMTGQTTIQEVLLFPQMR 499


>gi|86147406|ref|ZP_01065719.1| lysyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85834834|gb|EAQ52979.1| lysyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 510

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 71/332 (21%), Positives = 137/332 (41%), Gaps = 47/332 (14%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H  GDL             ++   V ++G +   R      FL I++  G  Q  A  
Sbjct: 47  REHLAGDLQAEFGEKTKEELEELNHIVAIAGRIMAKRGP----FLAIQETSGRIQAYAAK 102

Query: 55  D--SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           D      E  + +    ++ + G +              G + ++ ++ E+L+ A   PL
Sbjct: 103 DVQKVLKEKYQGLDIGDIIGVKGALHKSGK---------GDLYVNMEEFELLTKALR-PL 152

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA 171
           P        + +R++ R++DL  +   +N  + R+++++S+R  M ++ ++E  TP++  
Sbjct: 153 PEKFHGLTDQEMRYRQRYVDLIVNEDSRNTFIVRSKLVSSIRNFMSSKGYLEVETPMMHV 212

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   S R 
Sbjct: 213 IPGGATARPFITHHNALDIDMY-LRVAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRH 270

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDD 281
             EF  ++   ++ +  D+++  E +L     +     ++            + R+   D
Sbjct: 271 NPEFTMMEFYQAYSDYKDLMDLTEEMLSTAAMDVLGSTSMPYGDETVEFGGTYARMSMFD 330

Query: 282 AIRRYGTDKP--------DLRNPIIMHNVTEH 305
           AI+ Y  +          DL+N  +M  + E 
Sbjct: 331 AIKHYTPENANIQALTEDDLQNRELMVKIAEE 362



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 12/159 (7%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEW---NEEEKKIDFAHNPFTMPQGGMESLKG 471
           +    IA+E+G+     +           E       E ++         P       + 
Sbjct: 354 ELMVKIAEEVGLYVEKFWTCG-----QLLEEIFGETAEPQLIQPTFITGYPADISPLARR 408

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYR 527
           +D       +++    G E+A+G    + ++   + F     +K+  ++           
Sbjct: 409 SDSNPFFTDRFEFFIGGREVANGFSELNDAQDQDERFKAQVNAKDAGDDEAMYYDADYIT 468

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + G+PP  G   GIDR+ ML      +R+V LFP  +
Sbjct: 469 ALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFPAMR 507


>gi|218708551|ref|YP_002416172.1| lysyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|218321570|emb|CAV17522.1| Lysyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 510

 Score =  185 bits (470), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 71/332 (21%), Positives = 137/332 (41%), Gaps = 47/332 (14%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H  GDL             ++   V ++G +   R      FL I++  G  Q  A  
Sbjct: 47  REHLAGDLQAEFGEKTKEELEELNHIVAIAGRIMAKRGP----FLAIQETSGRIQAYAAK 102

Query: 55  D--SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           D      E  + +    ++ + G +              G + ++ ++ E+L+ A   PL
Sbjct: 103 DVQKVLKEKYQGLDIGDIIGVKGALHKSGK---------GDLYVNMEEFELLTKALR-PL 152

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA 171
           P        + +R++ R++DL  +   +N  + R+++++S+R  M ++ ++E  TP++  
Sbjct: 153 PEKFHGLTDQEMRYRQRYVDLIVNEDSRNTFIVRSKLVSSIRNFMSSKGYLEVETPMMHV 212

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   S R 
Sbjct: 213 IPGGATARPFITHHNALDIDMY-LRVAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRH 270

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDD 281
             EF  ++   ++ +  D+++  E +L     +     ++            + R+   D
Sbjct: 271 NPEFTMMEFYQAYSDYKDLMDLTEEMLSTAAMDVLGSTSMPYGDETVEFGGTYARMSMFD 330

Query: 282 AIRRYGTDKP--------DLRNPIIMHNVTEH 305
           AI+ Y  +          DL+N  +M  + E 
Sbjct: 331 AIKHYTPENANIQALTEDDLQNRELMVKIAEE 362



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 12/159 (7%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEW---NEEEKKIDFAHNPFTMPQGGMESLKG 471
           +    IA+E+G+     +           E       E ++         P       + 
Sbjct: 354 ELMVKIAEEVGLYVEKFWTCG-----QLLEEIFGETAEPQLIQPTFITGYPADISPLARR 408

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYR 527
           +D       +++    G E+A+G    + ++   + F     +K+  ++           
Sbjct: 409 SDSNPFFTDRFEFFIGGREVANGFSELNDAQDQDERFKAQVNAKDAGDDEAMYYDADYIT 468

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A + G+PP  G   GIDR+ ML      +R+V LFP  +
Sbjct: 469 ALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFPAMR 507


>gi|224143682|ref|XP_002325039.1| predicted protein [Populus trichocarpa]
 gi|222866473|gb|EEF03604.1| predicted protein [Populus trichocarpa]
          Length = 549

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 119/348 (34%), Gaps = 28/348 (8%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V L+G +   R     + F D+       QV+A+   +  + A+  +    +    +V  
Sbjct: 77  VSLAGRIMSKRSSSSKLFFYDLHGLGTKVQVMADASKSGLDEAEFSKLHSSVKRGDIV-- 134

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---------------------- 117
                       G++ +      +LS    +                             
Sbjct: 135 -GVTGFPGKTKRGELSIFPTSFTVLSHCLHMMPRQKAGPGSDACKSEVWAPGTVRNPEAY 193

Query: 118 REYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
               +  R++ R+LDL  +  + +    R++II  ++  +   +F+E  TP++   +   
Sbjct: 194 ILKDQETRYRQRYLDLMLNLEVQQIFKTRSKIIKYVKSFLDNLDFLEVETPMMNMIAGGA 253

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A    V    +      +  AP+ + + L+  G DR ++I   FR+E       P EF  
Sbjct: 254 AARPFVTHHNDLNMKLYMRIAPELFLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTT 312

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
            +  M++ + +D++   E +L G+ +E + G  +  +   +  D     +      +   
Sbjct: 313 CEFYMAYADYNDLMELTEKMLSGMVKELTGGYKIKYHANGLDKDPIEIDFTPPFRRIDMI 372

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
             +  +    +  +         +    E + +            D++
Sbjct: 373 EELEKMANLNIPKDLSSDEATKYLVAACERFEVKCPPPQTTTRLLDKL 420



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 6/115 (5%)

Query: 458 PFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
            F + Q  + S     +        +++L  N  E+ +     +   V  + F +    +
Sbjct: 433 AFIINQPEIMSPLAKWHRSKPGLTERFELFVNKHELCNAYTELNDPVVQRERFESQLKDR 492

Query: 516 EVVENRFGGLYR----AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +  ++           A + G+PP GG   GIDR+ MLL  ++N++EV LFP  +
Sbjct: 493 QSGDDEAMAFDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQNIKEVLLFPAMK 547


>gi|209527076|ref|ZP_03275591.1| nucleic acid binding OB-fold tRNA/helicase-type [Arthrospira maxima
           CS-328]
 gi|209492504|gb|EDZ92844.1| nucleic acid binding OB-fold tRNA/helicase-type [Arthrospira maxima
           CS-328]
          Length = 267

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 96/259 (37%), Gaps = 22/259 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L     G  V + GWV   R      F+++ D   +  +    +    + A  +R     
Sbjct: 10  LRTGKPGEAVTVQGWVRTKRELKEFTFVEVNDGSCMANLQVVLNPDLTDYAAILRQ---- 65

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  + E +++     +IEL A  +++   A+     +  +R   E +R     L
Sbjct: 66  LNTGASVEVTGEIVSSPAKGQRIELKADTVQVYGEADPQTYVLQKKRHSFEFLR-TIAHL 124

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +T       R     ++        F+   TPI+TAS  EGA +    + ++    
Sbjct: 125 RSRTNTYGAVFRVRNACAAAVHQFFQERGFLWIHTPIITASDCEGAGELFSVTSLDLNHL 184

Query: 190 ------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q +  +MA  F   +   P FR E+  + R   EF
Sbjct: 185 PLTETKTVDFSQDFFGKRAFLTVSGQLEAEIMALAFGNVYTFGPTFRAENSNTSRHLAEF 244

Query: 235 YQLDMEMSFVEQDDILNTM 253
           + ++ EM+F + D  ++  
Sbjct: 245 WMIEPEMAFCDLDGNMDLA 263


>gi|71400970|ref|XP_803219.1| aspartyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70865990|gb|EAN81773.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 564

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 68/288 (23%), Positives = 118/288 (40%), Gaps = 18/288 (6%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRS 67
           L    VG  V +   V   R  G + F+ +RD     Q +A    +      +    +  
Sbjct: 86  LTKEHVGKTVTVRARVDTTRKKGKLAFMVLRDGTDSIQAMAAVAEDVPKEMVDFIGQIPC 145

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGEREYPE-- 122
           E ++ ++ +V     E    +    +IEL   KI +LS A       L     RE  E  
Sbjct: 146 ESIVDVEAIVCGV--EQPITSTSQQEIELKVNKIHVLSEALRVLPFTLEDASRRETDEGI 203

Query: 123 ----SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                 R   R+LDLR    +     ++R+    R  ++  +F+E  +P + A++ EG  
Sbjct: 204 KINFDTRLGCRWLDLRTPASNAIFKVQSRVGQYFRQFLMDHDFVEIHSPKIIAAASEGGA 263

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +       N+ ++ A  Q+PQ YKQ+ +     R F++ P FR E+  + R   EF  LD
Sbjct: 264 NVFKVGYFNRDAYLA--QSPQLYKQMALQGDLKRVFEVGPVFRAENSNTHRHLTEFVGLD 321

Query: 239 MEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +EM   E   ++L+T E +   +F + +          R    + +  
Sbjct: 322 VEMRINEHYYEVLDTAEELFCYIFAQLAKHTGELEAICRQYPFEPLLW 369



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 13/119 (10%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
             A   +TMP    E    +         YD+   G EI+SG  R H S ++L+   ++G
Sbjct: 459 TAARPFYTMPFPDDERFTNS---------YDMFIRGEEISSGAQRIHDSSLLLKRAQSLG 509

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +    +++       +F+ G  PHGG   G++R+VML LG  NVR VSLFP        
Sbjct: 510 VDLSPIKD----YVDSFRLGAWPHGGFGVGLERVVMLYLGLCNVRLVSLFPRDPQRVTP 564


>gi|317485967|ref|ZP_07944822.1| asparaginyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316922740|gb|EFV43971.1| asparaginyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 460

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/372 (17%), Positives = 126/372 (33%), Gaps = 48/372 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           +R+ GWV   R   G  FL++ D   +   Q + +  +A ++  + V +   + + G ++
Sbjct: 19  IRIGGWVRTRRDAKGFSFLELNDGSCLGNIQCIVDEGTAAWDKLEGVNTGACVAVTGELV 78

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               +         + E+ A+ + +  +A+    P+  +R   E +R     L  R +  
Sbjct: 79  ESPGKG-------QKWEVRAKDMTVFGLADPETFPLQKKRHSDEFLR-TIAHLRSRTNKY 130

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--------- 189
                 R    +++        F    TPILT S  EGA +    + +            
Sbjct: 131 GAAFRIRAEAAHAVHDFFYQNGFYYVHTPILTGSDCEGAGEMFRVTTLPLNTPVKPGENP 190

Query: 190 ---SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               F+          Q +   +A G  + +   P FR E+  + R   EF+ ++ E++F
Sbjct: 191 YAQDFFGKECSLTVSGQLEAEALALGLGKVYTFGPTFRAENSNTPRHAAEFWMIEPEVAF 250

Query: 244 VEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNFLRICYDDA 282
            + +D ++  E++   V                              V+  F R  Y +A
Sbjct: 251 TDINDNMDLAESLTCFVINRVLERRADDMDLFDRFVDKGLVDRLKGMVAQPFARCSYREA 310

Query: 283 IRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
           I        +   P    +   TEH        F + ++V    +           +R  
Sbjct: 311 IDILKASGKNFEYPAKFGLDLQTEHERFLAEEHFKRPVAVYDYPKEIKAFYMRQNDDRET 370

Query: 341 CDRMNEWARSQG 352
              M+      G
Sbjct: 371 VAAMDVLVPRIG 382



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 50/153 (32%), Gaps = 26/153 (16%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGND 473
                   E  +   +      + D+P     +E K        F M Q    E++   D
Sbjct: 328 GLDLQTEHERFLAEEHFKRPVAVYDYP-----KEIK-------AFYMRQNDDRETVAAMD 375

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           +         LV    E+  G  R    +V+      +          +       + G 
Sbjct: 376 V---------LVPRIGELIGGSQREERLDVLESRIREMNQDP----ANYWWYLDLRRFGS 422

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            PH G   G +R+VM+L G  N+R+   FP + 
Sbjct: 423 VPHSGFGMGFERLVMMLTGISNIRDALPFPRTP 455


>gi|307546433|ref|YP_003898912.1| lysyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307218457|emb|CBV43727.1| lysyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 517

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/308 (20%), Positives = 116/308 (37%), Gaps = 40/308 (12%)

Query: 9   CGDLGVSD------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             +LG  D      +G    ++G + R R      F+ I+D  G  Q+  +      E  
Sbjct: 56  AAELGDKDKAELESLGRPAAVAGRILRKRGP----FIVIQDASGQIQLYVDKKGLPAETL 111

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + ++   +  I       +          G + +  ++  +L+ +   PLP         
Sbjct: 112 EDIKGWDIGDI------VAGRGPVHKSGKGDLYVMMEEARLLTKSLR-PLPDKFHGLTDM 164

Query: 123 SIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R++ R++DL  +   + +   R  +I++MR       F+E  TP+L        AR F
Sbjct: 165 EARYRQRYVDLIMNPDSRRVFETRAGVISAMRRFFEDHGFMEVETPMLQPIPGGATARPF 224

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  ++  
Sbjct: 225 ITHHNALDIDMY-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNP-EFTMVEYY 282

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN-------------------TVSNNFLRICYDD 281
            ++ +  D+++  E +LR V  E                             F R+   D
Sbjct: 283 QAYADYQDLMDFTEAMLRTVTREVLGDTTVVSTVRDSEGEVLETFEYDFGKPFERLSVFD 342

Query: 282 AIRRYGTD 289
           AI  Y  D
Sbjct: 343 AILAYNPD 350



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 65/178 (36%), Gaps = 6/178 (3%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+      D          A   IA+ L I   + +    +     +E   E  ++    
Sbjct: 342 DAILAYNPDITAEALADEAAARQIAERLDIDVKDGWGLGKV-QIEIFEKTVE-HRLQQPT 399

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK- 515
                P       +  D       +++    G E+A+G    + +E   + F+     K 
Sbjct: 400 FIIDYPTEVSPLARRKDTDPFVTERFEFFVGGRELANGFSELNDAEDQAERFAAQAAEKD 459

Query: 516 ---EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              +          RA + G+PP  G   GIDR+VMLL  + ++R+V LFP  +   D
Sbjct: 460 AGDQEAMYYDADYVRALEYGLPPTAGEGIGIDRLVMLLTDSASIRDVLLFPAMRPSAD 517


>gi|296823266|ref|XP_002850417.1| lysyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238837971|gb|EEQ27633.1| lysyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 608

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 55/261 (21%), Positives = 112/261 (42%), Gaps = 13/261 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV-----VANPDSACFEIAKSVR 66
           G       VR++G ++  R  G  +IF D+R      QV         D       + +R
Sbjct: 120 GEQMPEKEVRIAGRIYTKRSAGAKLIFYDLRAEGVKVQVACQAQEVTGDVPFEAQHEQLR 179

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ I G        T   N   G++ + A+++ +LS      +P        +  RF
Sbjct: 180 RGDIVGIVGF----PGRTNPKNRDDGELSIFARQVTLLSPCL-HQIPSEHYGLKDQEQRF 234

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +   +N  V R++I++ +R      +F+E  TP++ A +        +   
Sbjct: 235 RQRYLDLIMNDSSRNVFVTRSKIVSYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHH 294

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            +      +  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +
Sbjct: 295 NDLNMNLFMRIAPELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYAD 353

Query: 246 QDDILNTMENVLRGVFEEFSN 266
             D++N  E+++ G+ +  + 
Sbjct: 354 VYDLMNVTEDLVSGLVKHVTG 374



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 4/95 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++      EI +     +        F      KE  ++           + + G
Sbjct: 486 GLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQARQKEQGDDEAQMIDENFCTSLEYG 545

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 546 LPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 580


>gi|33519727|ref|NP_878559.1| lysyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|39932112|sp|Q7VRF5|SYK_BLOFL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33504072|emb|CAD83333.1| lysyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 485

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 68/336 (20%), Positives = 141/336 (41%), Gaps = 37/336 (11%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-----NPDS 56
            +Y   +  +L    +   V ++G +   R  G   F+ +RD  G  Q+          +
Sbjct: 26  QKYDHKTNTEL--IHLNVKVSVAGRIMTRRIMGKSSFMTLRDGGGCIQLYFTIHDMKSQT 83

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F++ K+     ++ + G++             TG++ +  +++ +L+ +    LP   
Sbjct: 84  MYFKVIKTWDIGDLIGVKGVL---------FKTRTGELSIHCKEMVLLTKSLR-SLPDKF 133

Query: 117 EREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                   +++ R+LDL  +    K    R+ II+ +R  M   +FIE  TP++      
Sbjct: 134 HGLRNIETKYRQRYLDLIVNEESMKTFKIRSLIISEIRRFMHQHHFIEVETPMMHHIPGG 193

Query: 176 G-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+        + Y L  AP+ Y + L+  GF++ F+I   FR+ +  S     EF
Sbjct: 194 ALARPFVTYHNKLNMNMY-LRIAPELYLKKLIIGGFEKIFEINRNFRN-ESISPYHNPEF 251

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRR 285
             +++  ++V+ ++++  ++ + R + E     +              F+++   +AI  
Sbjct: 252 TMMEIYEAYVDYNNMIIFVQELFRTLTERILRKSVIEYGDYSLDFEKPFIKMSIKEAIMY 311

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
           Y    PD+R      N+ +  V  +   F K+ S N
Sbjct: 312 Y---LPDIRT----KNIDDILVVFDILKFFKVPSDN 340



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 9/123 (7%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM----- 504
           KKI         P       + ++  +  A +++L   G EI +G    +  +       
Sbjct: 358 KKIIQPTCITHYPIEVSPLARCSNDNAKIADRFELFIAGHEIGNGFSELNDPDDQRNRFL 417

Query: 505 ----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
                +  +N     E           A + G+PP  G+  GIDR+VMLL    N+R+V 
Sbjct: 418 KQATEKMINNDIDQDESNMPYDKDYIVALEYGLPPTAGVGIGIDRLVMLLTNKHNIRDVI 477

Query: 561 LFP 563
           LFP
Sbjct: 478 LFP 480


>gi|326336335|ref|ZP_08202506.1| lysine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325691509|gb|EGD33477.1| lysine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 560

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 58/287 (20%), Positives = 110/287 (38%), Gaps = 20/287 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +   R  G   F  ++D  G  Q+    D  C    K++ +E    +  L 
Sbjct: 44  GKEVTVAGRIMSFRIQGKASFATLQDSSGRVQLYFKRDELCPGEDKTLYNEVFKKLLDLG 103

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-------GEREYPESIRFKYRF 130
                +        G+  +  +  ++L                   +       R++ R+
Sbjct: 104 DFIGVKGTLFTTQMGEKSIDVKHFKVLCKTLRPLPLPKVDAQGKVHDEFNDVEQRYRMRY 163

Query: 131 LDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           +DL  +   K +  KR R+ N+MR       +IE  TPIL A      AR F+       
Sbjct: 164 VDLVVNPQVKEVFLKRNRLFNAMREYFNNHGYIEVETPILQAIPGGASARPFITHHNALD 223

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  A + Y + L+  GFD  ++ A  FR+E       P EF  +++ +++ + + 
Sbjct: 224 IPLY-MRIANELYLKRLIVGGFDGVYEFAKNFRNEGMDRTHNP-EFTGMEIYVAYKDYNW 281

Query: 249 ILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY 286
           ++   EN+L    +  +                 + R+   +AI+R+
Sbjct: 282 MMEFTENLLEYCAKAVNGTTKATFGKHEVDFKAPYPRVTMTEAIKRF 328



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 371 EGNFIQPTFITDYPKEMSPLTKEHRNDKNLTERFELMVCGKEIANAYSELNDPIDQRERF 430

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
               I  E  ++          RA + GMPP  G+  G+DR++M L   + ++EV  FP 
Sbjct: 431 EAQMILSERGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLIMFLTNNETIQEVLFFPQ 490

Query: 565 SQ 566
            +
Sbjct: 491 MR 492


>gi|206889994|ref|YP_002249051.1| lysyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741932|gb|ACI20989.1| lysyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 494

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 63/342 (18%), Positives = 125/342 (36%), Gaps = 32/342 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWV 70
            + +    + ++G V  +R  G   F  ++D  G  Q+    D     F + K++    +
Sbjct: 52  HLENENITISVAGRVILLRDFGKAAFAHVQDSKGKIQIYLRKDILGEKFSLIKNLDIGDI 111

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G +             T ++ +       LS +   PLP           R++ R+
Sbjct: 112 VGVEGRL---------FRTKTNELTIEVHNFVFLSKSLR-PLPEKWHGLKDIEARYRQRY 161

Query: 131 LDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQ 188
           +DL  +  + +  VKR  II  +R  +  E F+E  TP++   +    A+ F        
Sbjct: 162 VDLIVNPSVKETFVKRQLIIKYLREFLENEGFLEVETPMMHTIAGGARAKPFKTYHEALD 221

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++  +++ + + 
Sbjct: 222 MELY-LRIAPELYLKRLLVGGFERVFEIGKNFRNEGISTKHNP-EFTMIEFYVAYKDYNW 279

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           +++  E +L  + ++      V               YG    D   P     + +   +
Sbjct: 280 LMDFTEKLLSYITQKVCGSLQVK--------------YGDYIIDFTPPFKRITMFDALKN 325

Query: 309 SE--FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
                 V           +   I    G       D + +  
Sbjct: 326 KGVPEEVMKDCNLAFKWAKAKGIEIPEGSSLSKVLDEIFKEV 367



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/329 (15%), Positives = 102/329 (31%), Gaps = 36/329 (10%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+E +  L     ++  +      G   +  F        +  Y    P+L    ++   
Sbjct: 187 FLENEGFLEVETPMMHTIA-----GGARAKPFKTYHEALDMELYLRIAPELYLKRLLVGG 241

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            E          ++ +S     E   I       +  +     E   S     +      
Sbjct: 242 FERVFEIGKNFRNEGISTKHNPEFTMIEFYVAYKDYNWLMDFTEKLLSYITQKVCGSLQV 301

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC----SFAADARN 418
                 +    P  +       +   V  ++    +  F             S  +   +
Sbjct: 302 KYGDYIIDFTPPFKRITMFDALKNKGVPEEVMKDCNLAFKWAKAKGIEIPEGSSLSKVLD 361

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            I +E  ++     +  +I+D+P  E +   K+                  K ++   + 
Sbjct: 362 EIFKE--VVEPELIQPTFIIDYPV-ELSPLAKR------------------KKDNPELV- 399

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAF----SNVGISKEVVENRFGGLYRAFQCGMP 534
             +++L   G E+A+     +      + F           E V        RA + GMP
Sbjct: 400 -ERFELFIAGREMANAFSELNDPLDQKERFLRQLEERLKGDEEVPEMDEDFVRALEIGMP 458

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  G   GIDR+VM+L   +++R+V LFP
Sbjct: 459 PAAGEGIGIDRLVMILTNNQSIRDVILFP 487


>gi|68472101|ref|XP_719846.1| hypothetical protein CaO19.6749 [Candida albicans SC5314]
 gi|68472336|ref|XP_719729.1| hypothetical protein CaO19.14041 [Candida albicans SC5314]
 gi|46441560|gb|EAL00856.1| hypothetical protein CaO19.14041 [Candida albicans SC5314]
 gi|46441686|gb|EAL00981.1| hypothetical protein CaO19.6749 [Candida albicans SC5314]
 gi|238881122|gb|EEQ44760.1| lysyl-tRNA synthetase [Candida albicans WO-1]
          Length = 594

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 57/298 (19%), Positives = 110/298 (36%), Gaps = 12/298 (4%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
            V +SG +   R  G  + F  ++ D   +  +    D+   E  +S+           V
Sbjct: 125 TVSVSGRIMTKRESGSKLKFYVLKGDGVEVQIMAQAQDAPSVEAFESMHEILRRGDIIGV 184

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                +T  A    G++ + A K+++L+      LP        +  R++ R+LDL  + 
Sbjct: 185 TGYPGKTAPAKGGEGELSVFATKVQLLTPCL-HMLPTEHYGFKDQEARYRKRYLDLIMND 243

Query: 138 LHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
             +   + R++II  +R  +   +F+E  TPIL   +             +      +  
Sbjct: 244 SSRERFRVRSKIIQYIRKFLDNRDFVEVETPILNVIAGGATAKPFTTHHNDLNMEMFMRI 303

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + + L+  G DR ++I   FR+E       P EF   +   ++ +  D+++  E +
Sbjct: 304 APELFLKELVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTELM 362

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
              + +E +           I Y            D   P    N+ E         F
Sbjct: 363 FSEMVKEITGDYV-------IKYHPEGPSGKEMTLDFSRPWKRVNMIEELEKVYNVKF 413


>gi|312148011|gb|ADQ30670.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 462

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 133/379 (35%), Gaps = 51/379 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +  + A      +    +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------ 186
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEIFRVSTLRFNKLN 185

Query: 187 -------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR-------------------- 276
           ++ EM+F + +D +   E++L+ +     N  +   +FL                     
Sbjct: 246 IEPEMAFYKLNDNIALAEDLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFE 305

Query: 277 -ICYDDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
            I Y  AI      K +    P    ++ T+H  +     F K + V    + +      
Sbjct: 306 VITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETFKKPVVVIDYPKNFKAFYMK 365

Query: 334 GGGNRAFCDRMNEWARSQG 352
              +      M+      G
Sbjct: 366 ANKDNKTVKGMDILVPKIG 384



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 379 LVPKIGEIIGGSEREDDLQKLENRIKELNLNI----EHLNWYLDLRRFGSAPHSGFGLGL 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V    G  N+R+   FP +  
Sbjct: 435 ERLVQYSTGISNIRDSIPFPRTPK 458


>gi|28377778|ref|NP_784670.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|38258538|sp|Q88Y40|SYN1_LACPL RecName: Full=Asparaginyl-tRNA synthetase 1; AltName:
           Full=Asparagine--tRNA ligase 1; Short=AsnRS 1
 gi|28270611|emb|CAD63517.1| asparagine--tRNA ligase [Lactobacillus plantarum WCFS1]
          Length = 431

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/310 (21%), Positives = 115/310 (37%), Gaps = 32/310 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY-GITQVVANPD--SACFEIAKSVRSEWV 70
              V   V++  W+   R  G I FL +RD       V    +     F     +  E  
Sbjct: 10  ADHVNEQVKIGVWLSNKRSSGKIAFLQLRDGTATFQGVALKNELGETAFAQLTDLAQETS 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G + + +             EL+  + E++  + + P+               +R 
Sbjct: 70  LWVTGTIHADTRSPF-------GYELAISQFEVVGTSHDYPITPKDHG---IDFLLDHRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    +  +  R  +I ++        FI+   PILT S+PEG  +        Q +
Sbjct: 120 LWLRSSRPNAIMRIRNEVIRAVYEFFNDRGFIKIDAPILTGSAPEGTTELFKTDYFGQDA 179

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y     A  F + F   P FR E  ++ R   EF+QL+ EM+++ QD+ L
Sbjct: 180 Y--LSQSGQLY-GEAGAMAFGKIFTFGPTFRAEKSKTRRHLTEFWQLEPEMAWMHQDESL 236

Query: 251 NTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRRYGTDKPDLR 294
              E ++  + +   +                       F R+ YDDAI     +  D+ 
Sbjct: 237 EVQEQLVAYLGQAVIDHCPHELAVLDRDVATLQKYTKLPFPRVSYDDAITLLQANGFDVD 296

Query: 295 NPIIMHNVTE 304
             +   +  E
Sbjct: 297 WGVDFGSPEE 306



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 48/143 (33%), Gaps = 7/143 (4%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDL 484
           ++  N F+  W +DF   E     +  D        P+      ++ +          DL
Sbjct: 287 LLQANGFDVDWGVDFGSPEETFLAEHFDQPVFVLNYPKAIKAFYMQAHPTRDDVVIAADL 346

Query: 485 VCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           +      EI  G  R+   + + +     G   +  E          + G  PH G   G
Sbjct: 347 LAPEGYGEIIGGSERSTDYDYLKERLLASGQDLQDYE----WYLDLRKYGSVPHSGFGMG 402

Query: 543 IDRIVMLLLGAKNVREVSLFPMS 565
           ++R +  +    +VRE   FP  
Sbjct: 403 LERFLAWITLQDHVRETIPFPRM 425


>gi|261337323|ref|ZP_05965207.1| asparagine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277695|gb|EFA23549.1| asparagine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 467

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 112/349 (32%), Gaps = 49/349 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ V + GWV  +R      F+ + D      V    +         + ++      G  
Sbjct: 18  GTTVTVCGWVRSIRDMKNFGFVILNDGSCFNDVQVVMNRETLANYDDIAAQN----TGAS 73

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +  + E           E++AQ IE+L  +         ++          + +  R + 
Sbjct: 74  LKVTGELKLTPDAKQPFEIAAQSIEVLGASSPDYPLQ--KKRATTEFLRTIQHIRPRTNL 131

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-------- 189
                  R+    ++     +  F+  +TPI+T +  EGA +    + ++          
Sbjct: 132 FRAVFRIRSVAAMAIHEFFQSRGFVYVNTPIITTNDAEGAGEMFRVTTLDMTNPPLNEDG 191

Query: 190 ------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+  P +     Q      A  F   +   P FR ED  + R   EF+ ++ E
Sbjct: 192 TIDWSRDFFGKPASLTVSGQLNAENFAMAFGDVYTFGPTFRAEDSNTKRHAAEFWMVEPE 251

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------------------FLRICY 279
           M+F + +D ++  + +L+ V            N                     F R+ Y
Sbjct: 252 MAFADLNDDMDLAQAMLQSVITTVLEQCADELNMLNRFVDKGLLERLRHVATSDFARVTY 311

Query: 280 DDAIRRYGT---DKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
            DAI        D      P+       TEH  +   + F K   V   
Sbjct: 312 TDAIAILEQAVADDHKFEYPVKWGVDLQTEHERYLTEQHFGKPTFVTDY 360



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 50/144 (34%), Gaps = 24/144 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P                 F M        + ND     A  
Sbjct: 342 HERYLTEQHFGKPTFVTDYP------------AGIKAFYM--------RLNDDGKTVAAV 381

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    EV+ +    +G+ K     ++       + G   H G   
Sbjct: 382 DCLVPGIGEIIGGSQREERLEVLERRIDELGMDK----EQYRYYLDLRRYGTVEHAGFGL 437

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +R+VM L G  N+R+V   P +
Sbjct: 438 GFERLVMYLTGVDNIRDVLPHPRT 461


>gi|92115113|ref|YP_575041.1| lysyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|122990398|sp|Q1QT66|SYK_CHRSD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|91798203|gb|ABE60342.1| lysyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 502

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 65/295 (22%), Positives = 121/295 (41%), Gaps = 30/295 (10%)

Query: 10  GDLGVSD------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
            +LG  D      +     ++G + R R      F+ I+D     Q+  +      E   
Sbjct: 52  AELGDKDKAELETLDRRASVAGRIMRKRGP----FIVIQDVSDQIQLYVDKKGLPAETLD 107

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++S  +    G +++       +    G + +   + ++L+ +   PLP          
Sbjct: 108 DIKSWDI----GDIVAARGPVHKSG--KGDLYVMMGEAQLLTKSLR-PLPDKYHGLTDTE 160

Query: 124 IRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R++DL  +   + +   R+R+I+ +R  ++   F+E  TP+L        AR F+
Sbjct: 161 ARYRQRYVDLIMNPESRRVFEVRSRVISGIRRFLVERGFMEVETPMLQQIPGGATARPFV 220

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  L+   
Sbjct: 221 THHNALDIDMY-LRVAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMLEFYW 278

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYG 287
           ++ +  D+L+  E ++R V  E     TV            F R+    +I  YG
Sbjct: 279 AYADYRDLLDLTEAMIRDVAHEVLGTTTVEYQGARYELGEPFQRLTLRQSILEYG 333



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 5/132 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E+K +D        P       + ND       +++    G E+A+G    + +E
Sbjct: 372 FEAVAEDK-LDRPTFITEYPAEVSPLARRNDTNPHVTDRFEFFVGGRELANGFSELNDAE 430

Query: 503 VMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F+     K+              RA + GMPP  G   GIDR+VMLL  + ++R+
Sbjct: 431 DQAERFAAQAAEKDAGDLEAMYYDADYVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRD 490

Query: 559 VSLFPMSQNFCD 570
           V LFP  +   D
Sbjct: 491 VLLFPAMRPSAD 502


>gi|325684702|gb|EGD26856.1| lysine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 507

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 78/419 (18%), Positives = 153/419 (36%), Gaps = 33/419 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +++G +   R  G + F D+ D  G  Q+    D    E  +  +   +    G  +   
Sbjct: 61  KIAGRMLAKRGKGKVGFADLYDRSGKIQIYVRKDMVGEENYQIFKKADL----GDFLGVE 116

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH-K 140
            E       +G++ + AQ +  LS A   PLP            ++ R+LDL  +    +
Sbjct: 117 GEVF--KTDSGELSVRAQHVTFLSKALR-PLPDKYHGLKDVESIYRQRYLDLITNHESYQ 173

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
             V RT+II ++R  +  ++F+E  TP+L        AR F+        + Y +  A +
Sbjct: 174 RFVNRTKIIQAIRDYLNGQDFLEVETPVLHNIPGGAEARPFITHHNALDINLY-MRIALE 232

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+    +R ++I   FR+E       P EF +L+   ++ +  D+++  E ++R 
Sbjct: 233 LPLKRLIVGDMERVYEIGRVFRNEGMDLKHNP-EFTELETYAAYYDFHDVMDEAEGIIRA 291

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
             +                 D  I   GTD  DL  P    ++ +         F + ++
Sbjct: 292 AAKVV-------------SEDGKINYQGTDL-DLGKPFRRVHMVDLIKELTGVDFWQPMT 337

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
           +    +V A               +N +    G+  +    +     G+   + P+AK  
Sbjct: 338 LEEARKVAAEHHVEVEPYWQVGHIINAFFEEFGEKTIVDPTFVY---GHPVEVSPLAKKN 394

Query: 380 NIVNTEAIRVR---LDMQDGDSCFFIAG--DPLKFCSFAADARNHIAQELGIINCNCFE 433
                   R     +  + G++   +    D  +        R+    E  II+ +   
Sbjct: 395 ADDPRFTDRFEIFIMGNEYGNAFSELNDPLDQRERFEAQMAERDAGNDEADIIDEDYLR 453



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 63/349 (18%), Positives = 118/349 (33%), Gaps = 28/349 (8%)

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGV-FEEF-----SNGNTVSNNFLRICYDDA 282
           R        +    FV +  I+  + + L G  F E       N    +     I + +A
Sbjct: 161 RYLDLITNHESYQRFVNRTKIIQAIRDYLNGQDFLEVETPVLHNIPGGAEARPFITHHNA 220

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +      +  L  P+    V +     E     +   ++  +       +       F D
Sbjct: 221 LDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNEGMDLKHNPEFTELETYAAYYDFHD 280

Query: 343 RMNEWARSQGQPGLAYIFWRL-DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
            M+E        G+     ++  E G +   G        ++      R+ M   D    
Sbjct: 281 VMDE------AEGIIRAAAKVVSEDGKINYQG------TDLDLGKPFRRVHMV--DLIKE 326

Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
           + G          +AR  +A E  +     ++   I++  F+E   E+  +D        
Sbjct: 327 LTGVDFWQPMTLEEAR-KVAAEHHVEVEPYWQVGHIINA-FFEEFGEKTIVDPTFVYGHP 384

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
            +    + K  D       ++++   G E  +     +      + F      ++   + 
Sbjct: 385 VEVSPLAKKNAD-DPRFTDRFEIFIMGNEYGNAFSELNDPLDQRERFEAQMAERDAGNDE 443

Query: 522 FG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                    RA + GMPP GG+  GIDR+VMLL  A ++R+V LFP  +
Sbjct: 444 ADIIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTNAASIRDVLLFPTMR 492


>gi|171056979|ref|YP_001789328.1| lysyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|170774424|gb|ACB32563.1| lysyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 514

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 55/270 (20%), Positives = 107/270 (39%), Gaps = 25/270 (9%)

Query: 6   THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYG----ITQVV 51
           T    DL     G              ++G +   R  G   F  ++D         Q+ 
Sbjct: 50  TDHATDLHRLHEGKDNEALEAAPITACVAGRMMLKRVMGKACFATLQDGSADGNPRIQLY 109

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              D+   E+  + +   +  I G      A        +G++ +    + +L+ +   P
Sbjct: 110 ITQDNVGAELLAAFKHWDLGDILG------ATGTLFRTKSGELSIKVTGLRLLTKSLR-P 162

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT 170
           +P        +  +++ R++DL  D   +   + R++ + S+R  M+   F+E  TP+L 
Sbjct: 163 MPDKHHGMTDQEQKYRQRYVDLMTDDSARERFRARSKAVASIRGFMLEHQFLEVETPMLH 222

Query: 171 A-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F+          + L  AP+ Y + L+  GF+R F+I   FR+E   S R
Sbjct: 223 PIPGGANAKPFVTHHNALDQEMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVR 280

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              EF  ++   ++    D+++  E +LR 
Sbjct: 281 HNPEFTMMEFYAAYWNHHDLMDFTEQLLRH 310



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 6/144 (4%)

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           LG      ++    + F  +E   EEK           P       + +D       +++
Sbjct: 367 LGEEPPKHWKLA-ALQFGLFEAVVEEKLWQPT-FIIDYPVEVSPLARASDANPSITERFE 424

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGI 539
           L   G E  +G    + +E     F +   +K+  +           RA + GMPP GG 
Sbjct: 425 LFITGREFGNGFSELNDAEDQAARFQSQVANKDAGDEEAMFYDADFIRALEYGMPPTGGC 484

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             GIDR++MLL  + ++R+V LFP
Sbjct: 485 GIGIDRLMMLLTDSVSIRDVVLFP 508


>gi|330752807|emb|CBL88326.1| lysyl-tRNA synthetase [uncultured Dokdonia sp.]
          Length = 564

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 65/340 (19%), Positives = 126/340 (37%), Gaps = 31/340 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS--EWVLCIDG 75
           G  V ++G +   R  G   F +I+D  G  QV  N D  C E  KS  +     L   G
Sbjct: 46  GEKVVMAGRLMSRRIQGNASFAEIQDGEGRIQVYFNRDEICTEEDKSKYNEVYKKLLDIG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKY 128
             +    E     +  G+I +  +   +LS A +       + E           +R++ 
Sbjct: 106 DFIGIEGEMFTTKV--GEITVLVKDFTLLSKALKPLPQPRTDDEGKVHDAFTDPEMRYRQ 163

Query: 129 RFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R++DL     + +  VKRT++ N+MR       + E  TP+L   +   A    +    +
Sbjct: 164 RYVDLTVNPHVKEVFVKRTKLFNAMRNFFNDAGYFEVETPVLQPIAGGAAARPFITHHNS 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
                 +  A + Y + L+  GF+  ++ +  FR+E       P EF  +++ +++ + +
Sbjct: 224 LDIPLYMRIANELYLKRLIVGGFEGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKDYN 282

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTE 304
            +++  E +L       +     +              +G  + D + P   + M +  +
Sbjct: 283 WMMDFCEQLLETCAIAVNGTTEAT--------------FGEHEVDFKAPYARVTMADSIK 328

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           HF   +         +    E   I      G     D +
Sbjct: 329 HFTGFDING-KTEDEIRAAAEGMGIEVDDTMGKGKLIDEI 367



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 8/131 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 373 EGNYIQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSELNDPIDQRERF 432

Query: 509 SNVGISKEVVENRF-----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                  +  ++           R+ + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 433 EAQLELAKRGDDEATASIDYDFLRSLEYGMPPTSGMGIGMDRLIMFLTNNQSIQEVLFFP 492

Query: 564 MS---QNFCDL 571
                +   DL
Sbjct: 493 QMKPEKKALDL 503


>gi|262038760|ref|ZP_06012117.1| lysine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261747218|gb|EEY34700.1| lysine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 493

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/315 (20%), Positives = 118/315 (37%), Gaps = 22/315 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
               + +G +   R  G   F  I+D  G  Q     D    E  +  +        GL 
Sbjct: 50  DKVFKTAGRIVAFRRMGKNGFGHIQDPTGKLQYYVKKDEVGEEQYEIYKKL------GLG 103

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
                E       TG++ L A+  E+LS     PLP           R++ R++DL  + 
Sbjct: 104 DFIGIEGTLFRTQTGELTLRAKSFEVLSK-NIRPLPEKFHGLTNVETRYRQRYVDLVMNS 162

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALP 195
            +   + KR +I+   R  +  + F E  TP++   +    AR F           + L 
Sbjct: 163 EVMDTMKKRFQIVRFFRKYLEEKGFTEVETPMMHPIAGGATARPFTTHHNALDMELF-LR 221

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF++ F+I   FR+E       P EF  +++  ++ +  D++N  E+
Sbjct: 222 VAPELYLKRLLVGGFEKVFEINRSFRNEGISIKHNP-EFTMMELYQAYADYVDMMNITED 280

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           ++  +  E      +     +I  +   RR           + M ++ +     +F   +
Sbjct: 281 LISKLTFELHGTYEIEYEGKKINMESPWRR-----------VKMKDIVKEVTGFDFDTVT 329

Query: 316 KILSVNPGYEVWAIP 330
                    +   IP
Sbjct: 330 SDEDAVTKAKELQIP 344



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPP 535
            +++L  +G E A+     +      + F      KE  ++          RA + GMPP
Sbjct: 397 DRFELFISGREFANAYSELNDPRDQKERFEEQVKMKEAGDDEAQNMDLDYIRALEYGMPP 456

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG+  GIDR+VML+  + ++R+V LFP
Sbjct: 457 AGGLGIGIDRLVMLMTNSASIRDVILFP 484


>gi|218262591|ref|ZP_03476996.1| hypothetical protein PRABACTJOHN_02675 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223300|gb|EEC95950.1| hypothetical protein PRABACTJOHN_02675 [Parabacteroides johnsonii
           DSM 18315]
          Length = 373

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 109/256 (42%), Gaps = 10/256 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV  + D  C E  K + +     +  +    
Sbjct: 55  VSIAGRIMSRRIMGKASFMELQDSEGRIQVYISRDDICLEENKDLYNIVFKKLLDIGDFV 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFLDLR 134
             +        G+I + AQ+I +LS + +    V  +            +R++ R++DL 
Sbjct: 115 GIKGFVFRTQMGEISVHAQEITVLSKSLKPLPVVKYKDGVAYDGFNDPELRYRQRYVDLV 174

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +  +    +KR  +I +MR  +    + E  TPIL +      AR F+          Y
Sbjct: 175 VNDGVKNIFMKRAAVIKTMRTALDEAGYTEVETPILQSIPGGASARPFITHHNSLDIGLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + +++ 
Sbjct: 235 -LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMELYVQYKDYNWMMSF 292

Query: 253 MENVLRGVFEEFSNGN 268
            E +L  +    +  +
Sbjct: 293 TEQLLERICIAVNGTH 308


>gi|88706909|ref|ZP_01104608.1| Lysyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88698831|gb|EAQ95951.1| Lysyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 499

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/279 (22%), Positives = 123/279 (44%), Gaps = 24/279 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
               ++G + R R      FL I+D  G  Q+  +      +   +++S  +    G ++
Sbjct: 66  EEFAVAGRLIRNRG----AFLLIQDGEGQIQLYVDRKGLDEDTLAAIKSWDL----GDIV 117

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           +       +    G + ++ ++  +L+ A   PLP        + +R++ R++DL  +  
Sbjct: 118 AARGPLHRSG--KGDLYINMREARLLTKALR-PLPDKYHGLADQELRYRQRYVDLIVNES 174

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
            +++ + R+++I+ +R  M A  F+E  TP++        A+ F+        + Y L  
Sbjct: 175 SRDVFRTRSKVISYIRKFMDAREFMEVETPMMQPIPGGAAAKPFVTHHNALDLTMY-LRI 233

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L   GF+R ++I   FR+E   +   P EF  L+   ++ +  D ++  E +
Sbjct: 234 APELYLKRLTVGGFERVYEINRNFRNEGLSTRHNP-EFTMLEYYWAYADYRDAMDLTEAM 292

Query: 257 LRGVFEEFSNGNT---------VSNNFLRICYDDAIRRY 286
           LRG+ EE                S  F R+   DAI  +
Sbjct: 293 LRGLTEEVLGTQQVTYQGQVFDFSKPFARMTVIDAILAH 331



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 5/128 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E  +++        P       + ND       +++    G E+A+G    + +E
Sbjct: 371 FEKTAE-HRLEQPTFITAYPTEVSPLARRNDEDPFVTDRFEFFVAGRELANGFSELNDAE 429

Query: 503 VMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              Q F      K+  +           RA + GMPP  G   GIDR+VMLL  + ++R+
Sbjct: 430 DQAQRFQEQVEQKDAGDEEAMHFDADYVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRD 489

Query: 559 VSLFPMSQ 566
           V LFP  +
Sbjct: 490 VLLFPHMR 497


>gi|156542803|ref|XP_001607568.1| PREDICTED: similar to lysyl-tRNA synthetase [Nasonia vitripennis]
          Length = 585

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 94/560 (16%), Positives = 162/560 (28%), Gaps = 109/560 (19%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G      F  ++G VH +R  G  +IF D+R      QV+AN     ++  K V     +
Sbjct: 105 GEMLENEFCSIAGRVHSIRRAGAKLIFFDLRGEGTKVQVMANARHY-YDEEKYVVDTDKI 163

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G       E        G+  +  + I++LS      LP        +  RF+ R+L
Sbjct: 164 ---GRGDIIGVEGFPCKSKKGEFSIMPKSIKLLSPCL-HMLPHLHFGLKDKETRFRQRYL 219

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL   D + +    R +II+ +R  +    F+E  TP++   +        V    +   
Sbjct: 220 DLIINDKVRQKFYVRAKIISYLRKFLDDLGFLEIETPMMNMIAGGATAKPFVTHHNDLNM 279

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              +  AP+ Y ++L+  G DR +                                    
Sbjct: 280 DLYMRIAPELYHKMLVVGGIDRVY------------------------------------ 303

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
                    V  +F N      +       +    Y              +  +    +E
Sbjct: 304 --------EVGRQFRNEGIDMTHNPEFTTCEFYMAYA-------------DYNDLMSITE 342

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
             V   + +++  Y++   P   GG          E       P    +         + 
Sbjct: 343 ELVSGMVKTIHGTYKIKYHPDGEGG----------EEVEIDFTPPFKRVSMVKTLEELLN 392

Query: 371 GMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN 430
              P     N   T    + L  +           P                    I   
Sbjct: 393 VKFPKPTEFNTPETNKFLIDLCAKHE----VECPAPKTTARLLDKLVG------DFIEEK 442

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
           C    +IMD                 +P  M              +    +++L     E
Sbjct: 443 CINPTFIMD-----------------HPQIMSPLAKWHRSE----AGLTERFELFVMKKE 481

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRI 546
           I +     +   V  + F      K   ++           A + G+PP  G   GIDR+
Sbjct: 482 ICNAYTELNDPFVQRERFEQQAKDKAAGDDEAQLIDENFCTALEYGLPPTAGWGIGIDRL 541

Query: 547 VMLLLGAKNVREVSLFPMSQ 566
            M L  + N++EV  FP  +
Sbjct: 542 TMFLTDSNNIKEVLFFPAMK 561


>gi|39575142|emb|CAE78983.1| asparaginyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
          Length = 514

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 76/412 (18%), Positives = 140/412 (33%), Gaps = 66/412 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   V LSGWV ++R      F+++ D       QVV + + A F    ++     
Sbjct: 64  TEKHLDKEVYLSGWVRKIRDQKNFGFIELNDGTFFKGVQVVFDNNLANFADVAALSISSS 123

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G V+       +        E+ A KIEI+  A+ L  P+  +R   E +R +   
Sbjct: 124 VLVTGKVVKSQGAGQS-------FEVMASKIEIVQKAD-LEYPLQNKRHSMEFLR-EIAH 174

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++      +NF+  +TPI+T S  EGA +    + +    
Sbjct: 175 LRPRTNTFSAVFRVRSVLAYAIHKFFNEQNFVYVNTPIITGSDAEGAGEMFRVTTLKLDK 234

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       + F   +   P FR E+  + R   E
Sbjct: 235 PPRKEDGSIDASQDFFGKETNLTVSGQLNGETFCAAFRNIYTFGPTFRAENSNTSRHAAE 294

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +    +   E++++ +             F                   
Sbjct: 295 FWMIEPEIAFADLTANMELAEDMIKYIIRYVMEQCPEEMEFFNQFVEKGLFDKLNNVLNN 354

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+   +   +EH  +     F K + V    +     
Sbjct: 355 NFGRVTYTEAIDILLKCGKKFEYPVQWGIDMQSEHERYLAEEHFKKPVFVTDYPKDI--- 411

Query: 331 AKGGGGNRAFCDRMNE-----WARSQGQPGLAYIFWRLDESGNVAGMGPVAK 377
                  +AF  ++NE      A     PG+  I        N+  +    K
Sbjct: 412 -------KAFYMKLNEDGKTVRAMDLLAPGIGEIIGGSQREDNLEKLESRMK 456



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 53/147 (36%), Gaps = 26/147 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P        K I      F M           D  +++A  
Sbjct: 389 HERYLAEEHFKKPVFVTDYP--------KDIKA----FYMK-------LNEDGKTVRAM- 428

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  EI  G  R    E +      VG+        +       + G  PH G  
Sbjct: 429 -DLLAPGIGEIIGGSQREDNLEKLESRMKQVGLHP----EEYSFYTDLRRYGTFPHAGYG 483

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G +R++M + G  N+R+V  FP +  
Sbjct: 484 LGFERMLMYVTGMGNIRDVIPFPRTPK 510


>gi|189219307|ref|YP_001939948.1| Lysyl-tRNA synthetase (class II) [Methylacidiphilum infernorum V4]
 gi|189186165|gb|ACD83350.1| Lysyl-tRNA synthetase (class II) [Methylacidiphilum infernorum V4]
          Length = 512

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 9/250 (3%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              VR++G +  +R  G   F  I+D     Q+ ANP S      K ++   +  I G+ 
Sbjct: 70  NQSVRIAGRILSIRDMGRSFFAHIQDQGSQMQIYANPQSCGEIAFKQLKHLDIGDIVGV- 128

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
                E       T +  +  +  ++L+ +   PLP           R++ R+LDL  + 
Sbjct: 129 -----EGSCFFTKTKEKTVRVKSWQLLAKSLR-PLPSQWYGLLDVEARYRQRYLDLIMNP 182

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + +  +KR++II  +R  +  + FIE  TP++   +   A +         G    L  
Sbjct: 183 EVKRVFLKRSQIIKEIREFLHNKGFIEVETPMMQTVAGGAAANPFKTFHEALGIPLYLRI 242

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF++ F++   FR+E       P EF  L+   ++ +   +   +E +
Sbjct: 243 APELYLKRLLVGGFEKIFELNRNFRNEGISRKHNP-EFTMLEAYWAYGDCQSMAKLLEEM 301

Query: 257 LRGVFEEFSN 266
           +  V ++   
Sbjct: 302 IVAVAQKVFG 311



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 58/283 (20%), Positives = 91/283 (32%), Gaps = 52/283 (18%)

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN--EWARSQG-----QPGLAYIFWRLDES 366
           F KI  +N  +    I       +R         E   + G        L  +   + + 
Sbjct: 256 FEKIFELNRNFRNEGI-------SRKHNPEFTMLEAYWAYGDCQSMAKLLEEMIVAVAQK 308

Query: 367 GNVAGMGPVAKHLNIVNTEAI----------RVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
                  P +K      T  +           V  +    D       + +K       A
Sbjct: 309 VFGTLQFPASKQFGEAKTINLTPPWPRRPFKEVLCEAIGEDWFSLSGEEKIKV-----AA 363

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL---KGND 473
           R  I  + G    +            +E   E K +       T        L   K  D
Sbjct: 364 RFEIEIKEGFTETDLCRH-------LFEKQVEAKTMGPLF--VTELPTEFVPLAKQKKED 414

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG-ISKEVVENRFGGLYRAFQCG 532
              ++   ++L+ NG E+A G    +   V  +         K+ ++  F     A + G
Sbjct: 415 PRFVEV--FELIVNGQELAPGYSELNDPIVQRERLEKQAGEEKQKIDEEF---LLALEYG 469

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP-----MSQNFCD 570
           MPP GGI  GIDR+ MLL G +++R+V LFP       Q   D
Sbjct: 470 MPPAGGIGLGIDRLTMLLSGQESIRDVILFPILRPKKEQKETD 512


>gi|119952903|ref|YP_945112.1| asparaginyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|119861674|gb|AAX17442.1| asparaginyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 461

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 74/380 (19%), Positives = 138/380 (36%), Gaps = 47/380 (12%)

Query: 1   MHRYRTHSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSA 57
           MH+    S  + L    + S + + GW+   R +G I F++I D   I   Q + N +  
Sbjct: 1   MHK----SIKEILNNPILDSIITVKGWIRTKRSNGKISFVEINDGSNIKGIQAIINEEDH 56

Query: 58  CFE--IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
            FE    K + +   + + G+++   A+           E+      I+  A++    + 
Sbjct: 57  QFEKKELKKLTTGASISLTGILILSPAKGQT-------YEIKTTNFNIIGEADQETYLLQ 109

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
            +R   E +R +   L +R +T       R +I   +        F+   TPI+T++  E
Sbjct: 110 KKRHTFEFLR-EIPHLRIRTNTFGAVARIRNQISYKIHEYFQKNGFLYIHTPIITSNDGE 168

Query: 176 GARDFLVPSRVN------------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCF 220
           GA +    S ++            +  F+   A      Q      A    + +   P F
Sbjct: 169 GAGEIFRVSTLDFNNITNGKEVDFKDDFFGKQAFLTVTGQLHGEAYAMALSKIYTFGPTF 228

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL----- 275
           R E+  + R   EF+ ++ EM+F   +D +N  EN L+ + +E  N       F      
Sbjct: 229 RAENSNTTRHASEFWMIEPEMAFFTLEDNINLAENFLKYILKETLNNCNQDIEFFDNFIE 288

Query: 276 ---------RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEV 326
                     I  +  +  Y      L N      +  ++   + +   +        + 
Sbjct: 289 KGLIKKIEDVINSNFEVITYTQAIKQLENATKTFEIKPYW-GMDLQTEHERYLTEEIIKK 347

Query: 327 WAIPAKGGGGNRAFCDRMNE 346
            AI        +AF  +MNE
Sbjct: 348 PAIVIDYPKEFKAFYMKMNE 367



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 14/118 (11%)

Query: 451 KIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                   F M      +++KG D+         LV    EI  G  R    + + +   
Sbjct: 353 DYPKEFKAFYMKMNEDGKTVKGMDI---------LVPRIGEIIGGSEREDNLDKLNKRIK 403

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + +                + G  PH G   G++R++  + G  N+R+V  FP +  
Sbjct: 404 ELNLEI----ETLNWYLDLRRFGSTPHSGFGLGLERLIQYITGMANIRDVIPFPRTPK 457


>gi|159041320|ref|YP_001540572.1| aspartyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157920155|gb|ABW01582.1| aspartyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 430

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 80/309 (25%), Positives = 141/309 (45%), Gaps = 23/309 (7%)

Query: 1   MHRYR-THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M  YR TH   ++     G  V LSGWV  +R  G I F+ +RD  G+ QV     S   
Sbjct: 1   MAIYRKTHWTSEIKPELDGKEVTLSGWVWEIRDVGRIKFIMLRDREGMVQVTVKRSSVSD 60

Query: 60  EIAKS---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           E   +   +  E V+ + G+V +       + +    +E+   ++ +L+ A  LP+ ++G
Sbjct: 61  ETWDTVSRLSKEDVVSVRGIVRA-------SKVAKTGVEVEPIEVRLLNKANPLPIDIWG 113

Query: 117 ERE-YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
             +     +R +YR +DL+R +        + ++ +MR  +    FIE  TP + A+S E
Sbjct: 114 NVDETMLDLRLRYRTVDLKRRSNVILFKALSEVVKAMRTTLYGYGFIEVFTPKIIATSTE 173

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           G  +        + ++ A  Q+PQ YK+ L AS  +R F+I P +R E   +     EF 
Sbjct: 174 GGAELFPVQYFERTAYLA--QSPQLYKEELTAS-LERVFEIGPAYRAEKHDTTYHVNEFI 230

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN--------GNTVSNNFLRICYDDAIRRYG 287
            +D E +F+   D+++ +E+V+   +    +            S  F  I YDDA+    
Sbjct: 231 SVDAEAAFMNYRDVMSVLEDVIVESYRASVDLLSQIGREVRVPSKPFKVITYDDALSMLD 290

Query: 288 TDKPDLRNP 296
            +   ++  
Sbjct: 291 KEGIKVKWG 299



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 24/134 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           E  +I+ FP                 +T P  G ES         ++  +DLV +G E+ 
Sbjct: 316 EPFFIIHFP-----------TMLRAFYTKPIEGDES---------RSESFDLVIDGMEVT 355

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  + + +A    G++       F      +  GMPPH G   G+ R++M++ G
Sbjct: 356 SGSTRIHDKDELEKAMRARGLNPG----NFSTHLEIYSWGMPPHAGWGLGLYRLMMVMAG 411

Query: 553 AKNVREVSLFPMSQ 566
            +N+REV LFP  +
Sbjct: 412 VRNIREVILFPRDR 425


>gi|237745072|ref|ZP_04575553.1| lysyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|260494850|ref|ZP_05814980.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|229432301|gb|EEO42513.1| lysyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|260198012|gb|EEW95529.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 493

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 57/300 (19%), Positives = 117/300 (39%), Gaps = 16/300 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + +G +  +R  G   F  I D  G  Q+    D    E    +     +   G ++   
Sbjct: 57  KTAGRIMSLRGKGKAYFAHIEDQSGKIQIYMKKDELGEEQFDHIVKMLNV---GDIVGIE 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK- 140
            E    +  T ++ L  + I +L+      LP          IR++ R++DL  +   + 
Sbjct: 114 GELFITH--TEELTLRVKSISLLAK-NVRSLPEKYHGLTDVEIRYRKRYIDLIMNPEVRD 170

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQ 199
             +KRT II  +R  +    F+E  TP++        AR F+          Y L  A +
Sbjct: 171 IFIKRTEIIKEIRKYLDERGFLEVETPMMHQILGGAAARPFITHHNALNLDLY-LRIAVE 229

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GFD+ +++   FR+E   S R   EF  +++  +  + +D+++  E ++  
Sbjct: 230 LYLKRLIVGGFDKVYEMGKDFRNEGI-SVRHNPEFTMIELYQAHADFNDMMDIAEGMIST 288

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP------DLRNPIIMHNVTEHFVHSEFRV 313
           + E+ +    +  + +++   +  R +  D        D    +      +        +
Sbjct: 289 ICEKINGTTDIVYDGVQLSLKNFKRVHMVDMIKDVTGVDFWKEMTFEEAKQLAKEHHVEI 348



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + +  D  +    +++L  N  E A+     +  
Sbjct: 362 FFEQKCEEKVIQPTFVYGHPVEISPLAKRNEDNPNF-TDRFELFINKREYANAFTELNDP 420

Query: 502 EVM-----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                    Q    +  ++E           A + GMPP GG+  GIDR+VMLL G+ ++
Sbjct: 421 ADQRGRFEAQVEEALRGNEEATPVIDEDYVEALEYGMPPTGGMGIGIDRLVMLLTGSPSI 480

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 481 RDVILFPQMK 490


>gi|89072537|ref|ZP_01159109.1| lysyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89051641|gb|EAR57094.1| lysyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 501

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/303 (21%), Positives = 137/303 (45%), Gaps = 27/303 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   +  +L   + G    ++G +   R      FL I+D  G  Q  A+ D     + 
Sbjct: 47  KYGEMTKEEL--EEAGHVFAIAGRIMAKRGP----FLAIQDVSGRIQAYASKD-----VQ 95

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K ++ ++     G ++        +    G + ++  + E+L+ A   PLP        +
Sbjct: 96  KELKEKYSGLDIGDIIGIKGTLHKSG--KGDLYVNMDEYELLTKALR-PLPEKFHGLTDQ 152

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
            +R++ R++DL  +   ++  V R+++++++R  M+ + F+E  TP++        AR F
Sbjct: 153 EMRYRQRYVDLIVNDDSRHAFVVRSKVVSAIRSFMVTKGFMEVETPMMHVIPGGATARPF 212

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  ++  
Sbjct: 213 ITHHNALDIDMY-LRVAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNPEFTMMEFY 270

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKP 291
           M++ + +D+++  E +L  +  +    + +            + R+   DAI++Y  +  
Sbjct: 271 MAYADYNDLMDLTEEMLSSIAIDVLGSSKMPYGEFEVEFAGPYTRMSMLDAIKQYNPEHE 330

Query: 292 DLR 294
           +++
Sbjct: 331 EIQ 333



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 6/114 (5%)

Query: 459 FTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F        S     ND       +++    G E+A+G    + ++   Q F     +K+
Sbjct: 384 FITEYPADISPLARRNDENPFITDRFEFFIGGREVANGFSELNDAQDQDQRFKAQVDAKD 443

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             ++           A + G+PP  G   GIDR+VML      +R+V LFP  +
Sbjct: 444 AGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFPAMR 497


>gi|71022075|ref|XP_761268.1| hypothetical protein UM05121.1 [Ustilago maydis 521]
 gi|46097762|gb|EAK82995.1| hypothetical protein UM05121.1 [Ustilago maydis 521]
          Length = 947

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/337 (18%), Positives = 125/337 (37%), Gaps = 39/337 (11%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLCI 73
             V ++G +H +R  G  + F D+       QV A    + D   F I + +R   V+ +
Sbjct: 471 EEVSIAGRLHNMRSSGQKLRFYDLHGEGVKVQVTAQLQDHTDGDFFAIHELLRRGDVVGV 530

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYPESIRFKYRF 130
            G         +      G++ +    I++LS + ++                 R + R+
Sbjct: 531 TG---------VPGKTKKGELSIFPSSIKLLSPSLKMLPKASQGDKGGFTDTEQRHRKRY 581

Query: 131 LDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDL   + +    VKR +IIN +R  +    F+E  TP++   +        V    +  
Sbjct: 582 LDLIMNNHVRDIFVKRAKIINYVRRFLDNLGFLEVETPMMNQIAGGATAKPFVTYHNDLK 641

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               +  AP+ + + L+  G DR ++I   FR+E       P EF   +  M++ +  D+
Sbjct: 642 LDLFMRIAPELFLKELVVGGLDRVYEIGRVFRNESIDQTHNP-EFSICEFYMAYADMYDL 700

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++  E+++ G+ +  +    +               Y  D  D    +      E    +
Sbjct: 701 MDITESMISGLVKAVTGSYKIK--------------YHPDGKD----VEGGREYEIDFST 742

Query: 310 EFRVFSKILSVNPGYEVWAIPAKG--GGGNRAFCDRM 344
            ++ F  I  +     V   PA        R +   +
Sbjct: 743 PWKRFDMIKELEAAMNVRFPPADQLHTEETRKWLSDL 779



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 6/110 (5%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQC 531
                ++++     EI +     +   V    F      K+  ++   G       A + 
Sbjct: 833 PGLCERFEVFVATKEICNAYTELNDPWVQRANFEEQSRQKDQGDDEAQGIDHVFIDALEH 892

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
           G+PP GG   GIDR+VM L  + +++EV  FP ++         P+ +  
Sbjct: 893 GLPPTGGWGLGIDRLVMFLTDSNSIKEVLAFPANKPL--PTDNKPAPIPD 940


>gi|313123090|ref|YP_004033349.1| lysyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312279653|gb|ADQ60372.1| Lysyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 507

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 78/419 (18%), Positives = 153/419 (36%), Gaps = 33/419 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +++G +   R  G + F D+ D  G  Q+    D    E  +  +   +    G  +   
Sbjct: 61  KIAGRMLAKRGKGKVGFADLYDRSGKIQIYVRKDMVGEENYQIFKKADL----GDFLGVE 116

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH-K 140
            E       +G++ + AQ +  LS A   PLP            ++ R+LDL  +    +
Sbjct: 117 GEVF--KTDSGELSVRAQHVTFLSKALR-PLPDKYHGLKDVESIYRQRYLDLITNHESYQ 173

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
             V RT+II ++R  +  ++F+E  TP+L        AR F+        + Y +  A +
Sbjct: 174 RFVNRTKIIQAIRDYLNGQDFLEVETPVLHNIPGGAEARPFITHHNALDINLY-MRIALE 232

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+    +R ++I   FR+E       P EF +L+   ++ +  D+++  E ++R 
Sbjct: 233 LPLKRLIVGDMERVYEIGRVFRNEGMDLKHNP-EFTELETYAAYYDFHDVMDEAEGIIRA 291

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
             +                 D  I   GTD  DL  P    ++ +         F + ++
Sbjct: 292 AAKVV-------------SEDGKINYQGTDL-DLGKPFRRVHMVDLIKELTGVDFWQPMT 337

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
           +    +V A               +N +    G+  +    +     G+   + P+AK  
Sbjct: 338 LEEARKVAAEHHVEVEPYWQVGHIINAFFEEFGEKTIVDPTFVY---GHPVEVSPLAKKN 394

Query: 380 NIVNTEAIRVR---LDMQDGDSCFFIAG--DPLKFCSFAADARNHIAQELGIINCNCFE 433
                   R     +  + G++   +    D  +        R+    E  II+ +   
Sbjct: 395 ADDPRFTDRFEIFIMGNEYGNAFSELNDPLDQRERFEAQMAERDAGNDEADIIDEDYLR 453



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 63/349 (18%), Positives = 118/349 (33%), Gaps = 28/349 (8%)

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGV-FEEF-----SNGNTVSNNFLRICYDDA 282
           R        +    FV +  I+  + + L G  F E       N    +     I + +A
Sbjct: 161 RYLDLITNHESYQRFVNRTKIIQAIRDYLNGQDFLEVETPVLHNIPGGAEARPFITHHNA 220

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +      +  L  P+    V +     E     +   ++  +       +       F D
Sbjct: 221 LDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNEGMDLKHNPEFTELETYAAYYDFHD 280

Query: 343 RMNEWARSQGQPGLAYIFWRL-DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
            M+E        G+     ++  E G +   G        ++      R+ M   D    
Sbjct: 281 VMDE------AEGIIRAAAKVVSEDGKINYQG------TDLDLGKPFRRVHMV--DLIKE 326

Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
           + G          +AR  +A E  +     ++   I++  F+E   E+  +D        
Sbjct: 327 LTGVDFWQPMTLEEAR-KVAAEHHVEVEPYWQVGHIINA-FFEEFGEKTIVDPTFVYGHP 384

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
            +    + K  D       ++++   G E  +     +      + F      ++   + 
Sbjct: 385 VEVSPLAKKNAD-DPRFTDRFEIFIMGNEYGNAFSELNDPLDQRERFEAQMAERDAGNDE 443

Query: 522 FG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                    RA + GMPP GG+  GIDR+VMLL  A ++R+V LFP  +
Sbjct: 444 ADIIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTNAASIRDVLLFPTMR 492


>gi|149192199|ref|ZP_01870416.1| lysyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148833957|gb|EDL50977.1| lysyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 505

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/301 (20%), Positives = 132/301 (43%), Gaps = 26/301 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G +   R      FL I++  G  Q  A  D     + K ++ ++    
Sbjct: 61  LEALNHVVSIAGRIMAKRGP----FLVIQETSGRIQAYAAKD-----VQKELKEKYQGLD 111

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++        +    G + ++ ++ E+L+ A   PLP        + +R++ R++DL
Sbjct: 112 IGDIIGVKGALHKSG--KGDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 168

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +   + R+++++S+R  M ++ ++E  TP++        AR F+          
Sbjct: 169 IVNEDSRQAFIVRSKLVSSIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDM 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++   ++ +  D+++
Sbjct: 229 Y-LRVAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYQAYADYKDLMD 286

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
             E +L  V  +     ++            + R+   DAI+ Y  +   ++  +   ++
Sbjct: 287 LTEEMLSTVAMDVLGSTSMPYGDETVEFGGKYARMSMFDAIKHYNPEHEQIQA-LTEEDL 345

Query: 303 T 303
           T
Sbjct: 346 T 346



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 381 EPKLIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 440

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K+  ++           A + G+PP  G   GIDR+ ML      +R+V LFP 
Sbjct: 441 KAQVDAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFPA 500

Query: 565 SQ 566
            +
Sbjct: 501 MR 502


>gi|320162390|ref|YP_004175615.1| lysyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319996244|dbj|BAJ65015.1| lysyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 511

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/337 (18%), Positives = 119/337 (35%), Gaps = 30/337 (8%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V + G +  +R  G + F  I D +G  Q+    +       +  R ++ L        
Sbjct: 55  QVSVGGRLRAIRTMGKVTFAHIEDGWGRLQLFFRVNELGEAEMERFRDDFDLGD-----F 109

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER----------EYPESIRFKYR 129
             A  +     +G+I L     ++LS A         E                 R++ R
Sbjct: 110 IQASGVMFRTRSGEITLHVHAFKMLSKAITPLPAAKDEVVDGKVIRHAALTDPETRYRQR 169

Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVN 187
           + DL     + +    R R + ++R  +    F+E  TPIL        AR F+      
Sbjct: 170 YADLAVNPEVREVFRIRARAVKALRDYLDNMGFLEVETPILQPIYGGAAARPFVTYHNQL 229

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + + Y L  + + Y + L+    DR ++I   FR+E       P EF QL+  M++ +  
Sbjct: 230 KQNLY-LRISFELYLKRLLVGMLDRVYEIGRDFRNEGVSYKHNP-EFTQLEFYMAYADYL 287

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
            ++   E ++  V ++     T++     I      RR      +LR  I+     +   
Sbjct: 288 QVMEITEQMVAYVAQQVLGTTTITYEGHTIDLTPPWRRL-----ELRQGILETTGIDIDQ 342

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           H      ++ +          +  K G       D +
Sbjct: 343 HPTAESLAEAMRAKG------MQPKPGYSRGKLIDSL 373



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 4/92 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR----FGGLYRAFQC 531
            +   +++    G E+ +     +      Q F  +G      +           RA   
Sbjct: 406 PLITERFEGYIGGMELCNAFTELNDPLDQEQRFLEMGRDYNADDEERHPMDEDYLRAMSY 465

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP GG   GIDR+VMLL     +REV LFP
Sbjct: 466 GMPPCGGFGMGIDRLVMLLADRHTIREVILFP 497


>gi|197335462|ref|YP_002155208.1| lysyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|226710932|sp|B5F9U5|SYK_VIBFM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|197316952|gb|ACH66399.1| lysyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 501

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/285 (21%), Positives = 128/285 (44%), Gaps = 25/285 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V   R      FL I++  G  Q  A       E+ K ++ ++     G ++  
Sbjct: 64  VAIAGRVMAKRGP----FLLIQEVSGKIQAYAAK-----EVQKELKDKYQGLDIGDIIGV 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                 +    G + ++ ++  +L+ A   PLP        + +R++ R++DL  +   +
Sbjct: 115 KGALHKSG--KGDLYVNMEEYVLLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNDDSR 171

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  + R++++ ++R  M+ + F+E  TP++        AR F+          Y L  AP
Sbjct: 172 HAFIVRSKVVAAIRNFMVDKGFMEVETPMMHVIPGGASARPFVTHHNALDVDMY-LRIAP 230

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++  M++ + +D+++  E +L 
Sbjct: 231 ELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYNDLMDLTEEMLS 289

Query: 259 GVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
            V       + +            + R+   DAI++Y  D  +++
Sbjct: 290 TVATSVLGSDKMPYGEHTVDFGGKYARMSMLDAIKQYNPDHSEIQ 334



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + ND       +++    G E+A+G    + ++   + F
Sbjct: 377 EPKLMQPTFITEYPADISPLARRNDDNDFITDRFEFFIGGREVANGFSELNDAQDQDERF 436

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP 
Sbjct: 437 KAQVNAKESGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFPS 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|270290652|ref|ZP_06196876.1| asparaginyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304386174|ref|ZP_07368507.1| asparagine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|270280712|gb|EFA26546.1| asparaginyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304327531|gb|EFL94758.1| asparagine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 463

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 68/356 (19%), Positives = 125/356 (35%), Gaps = 51/356 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVL 71
             D    V ++GW+  +R    I FL+I D   I  V          +E  K       L
Sbjct: 14  THDEDVSVEVTGWLKTLRSSKKISFLEINDGSCIKNVQVIMENGLENYEEIKKAPIYTTL 73

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G V+                E+ A +IE+L  ++        ++ +      +   L
Sbjct: 74  KVVGTVVDTPK-------AKQPFEIHATEIEVLGNSDSDYPLQ--KKHHTPEFLREQAHL 124

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +T +     R+    ++   +   NF+  +TP++T+S  EGA +    + ++    
Sbjct: 125 RPRTNTFYAVFRIRSLAAFAIHEFLQKNNFVYVNTPLITSSDTEGAGEMFKVTTLDLNNV 184

Query: 190 ------------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+  P       Q      A  F   +   P FR ED  + R   EF
Sbjct: 185 PKNEEGKVDSTKDFFKQPTNLTVSGQLNAEAFALAFRDVYTFGPAFRAEDSHTTRHAAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ EM+F    D++N  E++L+ V        +   +FL                   
Sbjct: 245 WMVEPEMAFANLQDVINVSEDMLKYVINYLLENASDEIDFLNQNVDQELRARLEATRDAD 304

Query: 276 --RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
             +I Y +AI +      +  N +   +   TEH  +   +V+ K + +       
Sbjct: 305 FAQITYTEAIDKLLAADQEFENKVEWGIDLQTEHERYLSEKVYQKPVFITDYPRDI 360



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 66/212 (31%), Gaps = 42/212 (19%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDM-QDGDSCFFIAGDPLKFCSFAADARNHIAQELG-- 425
           +         LN    + +R RL+  +D D          +       A      ++   
Sbjct: 275 LENASDEIDFLNQNVDQELRARLEATRDADFAQITY---TEAIDKLLAADQEFENKVEWG 331

Query: 426 ----------IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
                     +      +  +I D+P        + I      F M +         D  
Sbjct: 332 IDLQTEHERYLSEKVYQKPVFITDYP--------RDIKA----FYMRENE-------DHK 372

Query: 476 SIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           ++ A   DL+  G  E+  G  R      + +      +  E  +          + G  
Sbjct: 373 TVAAV--DLLVPGIGELIGGSQREERLAKLNEKIKEFNLDPEEYK----WYLELRKYGET 426

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            H G   G +R++M + G +N+R+V  FP + 
Sbjct: 427 EHSGFGIGFERLLMYVTGVENIRDVIPFPRTP 458


>gi|125586971|gb|EAZ27635.1| hypothetical protein OsJ_11579 [Oryza sativa Japonica Group]
          Length = 630

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 128/346 (36%), Gaps = 35/346 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           + +Y++ + GD     V     L+G +   R     ++F D+       QV A+  ++  
Sbjct: 115 IEKYKSMNVGD---KLVDVTECLAGRIMTKRAQSSKLLFYDLYGGGEKVQVFADARTSEL 171

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E  + ++    L    +V              G++ +  +KI +LS    +      E  
Sbjct: 172 EDNEFIKFHSTLKRGDIV---GVCGYPGKSKRGELSIFPKKIVVLSPCLHMMPRQKSEGS 228

Query: 120 Y-------------------PESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE 159
                                +  R++ R+LDL  +  +      R+++++ +R  +   
Sbjct: 229 AVPTPWAPGMGRNIEKYVLRDQETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDGL 288

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
           +F+E  TP++   +   A    V           +  AP+ Y + L+  G DR ++I   
Sbjct: 289 DFLEVETPMMNMIAGGAAARPFVTHHNELNMRLYMRIAPELYLKELVVGGLDRVYEIGKQ 348

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           FR+E       P EF   +  M++ + +D++   E +L G+ +E + G        +I Y
Sbjct: 349 FRNEGIDLTHNP-EFTTCEFYMAYADYNDLIELTETMLSGMVKELTGGY-------KIKY 400

Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                     + D   P    ++ E           K LS +   +
Sbjct: 401 HANGVEKPPIEIDFTPPFRKIDMIEELEAMAKLNIPKDLSSDEANK 446


>gi|319942464|ref|ZP_08016776.1| lysyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804013|gb|EFW00926.1| lysyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 505

 Score =  185 bits (469), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 64/299 (21%), Positives = 125/299 (41%), Gaps = 19/299 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SAC 58
            +Y   +  +L    +   V  +G V   R  G + F  +RD+ G  Q          A 
Sbjct: 50  EKYGNKTAEELAA--LAPKVACAGRVMLKRVMGRLTFATVRDYTGTMQYFVQESTVGEAA 107

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +   K++    ++  +G +M   A         G + +      +++ +   P+P   + 
Sbjct: 108 YADFKTLDLGDIVACEGTLMRTQA---------GDLAIKVTSFRLMAKSLR-PMPDKHKG 157

Query: 119 EYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
              +   ++ R++DL  +   +   +KR++ I S+R  M+A +F+E  TP+L        
Sbjct: 158 LQDQEFCYRRRYVDLMVNAESRERFIKRSKAIASIRNFMLANDFLEVETPMLHPIPGGAN 217

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  
Sbjct: 218 ARPFITHHNALNTEMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGIDARHNP-EFTM 275

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           ++   ++    D +   E +LR V  E +    V+   + I +++   +    +  L+ 
Sbjct: 276 MEFYATYWTYKDQMEFTEALLRHVAREVTGSAIVTYQGMTINFEEPFDKLTPKQAILKY 334



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           EKK+         P       + +D+      +++L   G E A+G    +  +     F
Sbjct: 379 EKKLIKPTFIIDYPTEISPLARASDVNPDITERFELFIAGRETANGFSELNDPDDQAARF 438

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 K   ++           A + G+PP  G   GIDR +MLL  A  +R+V LFP
Sbjct: 439 RAQVERKGHGDDEAMYYDADYVTALEYGLPPTAGCGIGIDRFMMLLTDAPTIRDVLLFP 497


>gi|294934243|ref|XP_002781041.1| lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239891231|gb|EER12836.1| lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 482

 Score =  185 bits (469), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 20/267 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG-IIFLDIR-DHYGITQVVANPD---SACFEIA-KSVRSE 68
              G  V L+G     R  G  ++F D+  D + I  +    D      F  A K V   
Sbjct: 119 QHTGDVVCLAGRAMSKRESGKHMVFYDLWEDGHKIQVMSVAQDWTGDVDFATAHKEVHRG 178

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G+V              G++ +   +I +LS      LP        + +RF+ 
Sbjct: 179 DIIGVKGVV---------GKSKRGELSIFPSEIRLLSTC-MHMLPKAQFGLKDQEVRFRQ 228

Query: 129 RFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186
           R+LDL  +   +    +R++II  +R  +    F+E  TP++   +    A+ F+     
Sbjct: 229 RYLDLIMNPHVRETFQRRSQIIGYIRSFLGNRGFMEVETPMMNMIAGGASAKPFITHHNE 288

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  AP+ Y ++L+  G DR F+I   FR+E       P EF   +  M++ + 
Sbjct: 289 LDLDLY-MRIAPELYLKMLVVGGLDRVFEIGKNFRNEGIDLTHNP-EFTSCEFYMAYADY 346

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNN 273
           +D++N  E ++ G+ +       V+ +
Sbjct: 347 NDLMNMTEEMISGMVKSIFGTYMVTFH 373


>gi|158288989|ref|XP_310792.4| AGAP000325-PA [Anopheles gambiae str. PEST]
 gi|157018837|gb|EAA06178.4| AGAP000325-PA [Anopheles gambiae str. PEST]
          Length = 616

 Score =  185 bits (469), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 18/268 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DSACFEIAKSVR 66
           G +     V ++G VH +R  G  +IF D+R      QV+AN      +   FE    +R
Sbjct: 136 GETLDDVTVSVAGRVHAIRESGVKLIFFDLRGEGLKLQVMANAKAYESEQLFFEETARLR 195

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ + G         +      G++   A++I++LS      LP        +  RF
Sbjct: 196 RGDIIGVTG---------VPGKTKKGELSAMARRIKLLSPCL-HMLPHLHYGLKDKETRF 245

Query: 127 KYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL   + +    V R  II+ +R       F+E  TP++            +   
Sbjct: 246 RQRYLDLILNNNVRNIFVTRALIISYVRRFFDNLGFLEVETPMMNMIPGGATAKPFITHH 305

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            +      L  AP+ Y ++L   G DR ++I   FR+E       P EF   +  M++ +
Sbjct: 306 NDLNMDLFLRIAPELYLKMLTVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYAD 364

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN 273
            +DI++  + +L G+         V  +
Sbjct: 365 YNDIIDITQQLLSGMVHAIHGSYKVKYH 392



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 5/109 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
            +    +++L     E+ +     +   V  + F      K   ++           A +
Sbjct: 497 ATGLTERFELFVMRKEVCNAYTELNDPAVQRERFEQQAADKAAGDDEAQLVDENFCTALE 556

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
            G+PP GG   GIDR+ M L  + N++EV LFP  +   D     P+ V
Sbjct: 557 YGLPPTGGWGMGIDRLTMFLTDSNNIKEVLLFPAMKP-DDPNRKHPAAV 604


>gi|302499425|ref|XP_003011708.1| hypothetical protein ARB_01935 [Arthroderma benhamiae CBS 112371]
 gi|291175261|gb|EFE31068.1| hypothetical protein ARB_01935 [Arthroderma benhamiae CBS 112371]
          Length = 620

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 116/262 (44%), Gaps = 15/262 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DSACFEIAKSVR 66
           G       VR++G ++  R  G  +IF D+R      QV         D       + +R
Sbjct: 120 GEQKPEKEVRIAGRIYTKRSSGAKLIFYDLRAEGVKVQVACQAQEATGDVPFEAQHEQLR 179

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ I G        T   N   G++ + A+++ +LS      +P        +  RF
Sbjct: 180 RGDIVGIVGF----PGRTNPKNRDDGELSIFARQVILLSPCL-HQIPSEHYGLKDQEQRF 234

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL  +   +N  V R++I++ +R      +F+E  TP++ A +    A+ F+   
Sbjct: 235 RQRYLDLIMNDSSRNVFVTRSKIVSYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHH 294

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                + + +  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ 
Sbjct: 295 NELNMNLF-MRIAPELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYA 352

Query: 245 EQDDILNTMENVLRGVFEEFSN 266
           +  D++N  E+++ G+ +  + 
Sbjct: 353 DVYDLMNVTEDLVSGLVKHVTG 374



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 4/96 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++      EI +     +        F      KE  ++           + + 
Sbjct: 485 PGLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQARQKEQGDDEAQMIDENFCTSLEY 544

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 545 GLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 580


>gi|229172913|ref|ZP_04300466.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228610536|gb|EEK67805.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 428

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 74/279 (26%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C + G    G  V L GWV ++R  G I FL IRD  G+ Q V   + A ++
Sbjct: 1   MKRSLTKECTEQG----GKVVLLQGWVKKIRHLGNISFLLIRDRSGVMQCVLENELAGYK 56

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
           +      E V+ + G ++  S   +        +E+ A  ++IL+ AE LP  +  ++  
Sbjct: 57  V----DVESVVQVVGQIVETSKTEL-------GVEVLAHDVKILNRAEPLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVLSLRHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F++AP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEVAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 224 ELGFIHDFYEVMQLETDVLRYMFQQVAKNCEKELQLLQI 262



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 62/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  E  +I  +P             A   +TMP     S+  
Sbjct: 293 GDLDTEGEKLLGKYVKETYKSELVFITHYP-----------KEARPMYTMPNKENSSITD 341

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  +++L +F   G+      + F      F+ 
Sbjct: 342 S---------FDLLYKGLEITSGAQRIHNYDLLLASFKEKGLHP----DTFQSYLNTFRY 388

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 389 GCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 422


>gi|198434726|ref|XP_002131983.1| PREDICTED: similar to lysyl-tRNA synthetase [Ciona intestinalis]
          Length = 576

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 64/340 (18%), Positives = 130/340 (38%), Gaps = 14/340 (4%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIAKSVRSE 68
           ++G       V ++G +H  R  G  +IF D+R D   +  +  +   +  E  + +   
Sbjct: 103 EVGSHLNDQQVSIAGRIHAKREAGPKLIFYDVRGDGVKLQVMANSKMYSSEEAYQEINER 162

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
                   V+   A+T       G++ +    IEILS      LP        +  R++ 
Sbjct: 163 TRRGDIIGVIGHPAKT-----KKGELSIVPNTIEILSPCL-HMLPHLHFGLKDKETRYRQ 216

Query: 129 RFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186
           R+LDL  +   +   + R +II+ +R       F+E  TP++   +    A+ F+     
Sbjct: 217 RYLDLIMNDQTRQKFITRAKIISYIRSFFDQMGFLEVETPMMNMVAGGATAKPFITHHND 276

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + 
Sbjct: 277 LDMDLY-MRVAPELYLKMLVVGGLDRVYEIGRLFRNEGIDMTHNP-EFTSCEFYMAYADY 334

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT--E 304
           +D++   E ++ G+ ++      ++ +      +     Y      LR    +  +T  E
Sbjct: 335 EDLMKISETLISGMVKQICGSYKLTYHPDGPDSEGYEVDYTPPFRRLRMLPDLERLTGME 394

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
               +E         ++       +            D++
Sbjct: 395 FPKPTELHTAGAQARLDEICVKLGVECPPPRTTARLLDKL 434



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 4/95 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++L  N  EI +     +   +  Q F    + K   ++           A + 
Sbjct: 467 KGLTERFELFVNKKEICNAYTELNDPMIQRQRFEQQALDKAAGDDEAQMVDENFCTALEY 526

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP GG   GIDR+ M L  + N++EV LFP  +
Sbjct: 527 GLPPTGGWGMGIDRLTMFLTDSNNIKEVLLFPAMK 561


>gi|28378421|ref|NP_785313.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254556629|ref|YP_003063046.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300767363|ref|ZP_07077275.1| asparagine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308180575|ref|YP_003924703.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|38258520|sp|Q88WA8|SYN2_LACPL RecName: Full=Asparaginyl-tRNA synthetase 2; AltName:
           Full=Asparagine--tRNA ligase 2; Short=AsnRS 2
 gi|28271257|emb|CAD64161.1| asparagine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254045556|gb|ACT62349.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300495182|gb|EFK30338.1| asparagine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308046066|gb|ADN98609.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 432

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 66/303 (21%), Positives = 120/303 (39%), Gaps = 16/303 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
              V   V++  W+   R  G I FL +RD         V +      FE+AK V+ E  
Sbjct: 11  KDHVDEKVKIGAWLTNKRSSGKIAFLQLRDGSAFFQGVVVKSQVSEEVFELAKEVKQEAS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I G++   S             E+  + I ++  +EE P+     +E+       +R 
Sbjct: 71  MWITGVIHEDSRSKF-------GYEIEVEDIVVVGESEEYPITP---KEHGVDFLLDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R  +I         E FI+  +PILT S+PEG  +       ++ +
Sbjct: 121 LWLRSKRPWAIMNIRNEVIRGTYEFFNQEGFIKMDSPILTGSAPEGTTELFHTEYFDRDA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y     A  + + F   P FR E  ++ R   EF+ ++ EM+F+ Q+  L
Sbjct: 181 Y--LSQSGQLY-AEAGALAYGKVFTFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEQSL 237

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
              E  +  + +   +    + + L    +   +      P +     +  + E+    +
Sbjct: 238 EVQERYIAFLVQGVIDHCQYALDILGRDVETLKKYTKLPYPRISYDEAIELLKENDFDVD 297

Query: 311 FRV 313
           + V
Sbjct: 298 WGV 300



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 51/156 (32%), Gaps = 33/156 (21%)

Query: 425 GIINCNCFEFCWIMDF--------------PFYEWNEEEKKIDFAHNPFTMPQGGMES-- 468
            ++  N F+  W +DF              P +  N        A  PF M         
Sbjct: 287 ELLKENDFDVDWGVDFGSPEETFLADHFDQPVFVLN-----YPKAIKPFYMKPHPTRDDV 341

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +   DLL+ + +         EI  G  R      +L      G++     + +      
Sbjct: 342 VICADLLAPEGYG--------EIIGGSERATDYNYLLDQIKQAGLNP----DDYAWYLDL 389

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            + G  PH G   G++R +  +    +VRE   FP 
Sbjct: 390 RKYGSVPHAGFGLGLERFLTWITAEDHVRETIPFPR 425


>gi|303284285|ref|XP_003061433.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456763|gb|EEH54063.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 521

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 69/336 (20%), Positives = 124/336 (36%), Gaps = 20/336 (5%)

Query: 5   RTHSCGDLGVSDV----GSFV-----RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           RTH+   L         G  V      + G V   R  G + FL I D  G  Q+  +  
Sbjct: 30  RTHTATQLQAMHASVENGVEVEGVTDAVCGRVKARRVFGKLAFLSIEDDGGAIQLYLDVK 89

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               +   + +    LC  G ++             G++ +   + E+L+ +  LPLP  
Sbjct: 90  RVDAKNPGTFKRIVDLCDMGDIVGARGTVKRTE--KGELSIVVDEFEMLTKSL-LPLPDK 146

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
            +       R++ R+LDL     +      R  I++ +R  +    F+E  TP+L + + 
Sbjct: 147 FKGLTDVETRYRQRYLDLIASPEVRDVFRTRAGIVSGIRRFLDDRAFMEMETPVLESRAG 206

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                         G    L  A + + + L+  GF+R +++   FR+E   +   P EF
Sbjct: 207 GADAKPFSTFHNALGMDLTLRIATELHLKRLVVGGFERVYEMGRIFRNEGISTRHNP-EF 265

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
             +++  ++ +  D+L   E+++    E         N  L I Y D I   G  +P  R
Sbjct: 266 TSVEVYQAYADVSDMLELTEDMICAAAER----ACPGNENLSIPYGDEIIHLGK-RPWRR 320

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
             +    V E+       +            +  IP
Sbjct: 321 ESMN-DLVKEYTGECALDIMGTFGETKDAQSLAGIP 355



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 49/156 (31%), Gaps = 36/156 (23%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS--IKAFQYDLVCNGFEIASGGIRNH 499
            +E   E K        F +      S       S      +++L   G E+A+      
Sbjct: 370 MFEACVETKLRQPT---FVLDHPVEISPLAKPHRSKPGVTERFELFIVGRELANSFSELT 426

Query: 500 MSEVMLQAFS----------------------------NVGISKEVVENRFGGLYRAFQC 531
                 +                                       ++  F     A + 
Sbjct: 427 DPVDQRKRLEGQIATHAKARSEARAAAEAQGKEALRAFEDDDYPIELDEDF---VTALEY 483

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           GMPP GG+  G+DR+VMLL  + ++R+V  FP+ + 
Sbjct: 484 GMPPTGGMGLGVDRLVMLLTNSASIRDVIAFPLLKK 519


>gi|302658888|ref|XP_003021142.1| hypothetical protein TRV_04757 [Trichophyton verrucosum HKI 0517]
 gi|291185024|gb|EFE40524.1| hypothetical protein TRV_04757 [Trichophyton verrucosum HKI 0517]
          Length = 620

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 116/262 (44%), Gaps = 15/262 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DSACFEIAKSVR 66
           G       VR++G ++  R  G  +IF D+R      QV         D       + +R
Sbjct: 120 GEQKPEKEVRIAGRIYTKRSSGAKLIFYDLRAEGVKVQVACQAQEATGDVPFEAQHEQLR 179

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ I G        T   N   G++ + A+++ +LS      +P        +  RF
Sbjct: 180 RGDIVGIVGF----PGRTNPKNRDDGELSIFARQVILLSPCL-HQIPSEHYGLKDQEQRF 234

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL  +   +N  V R++I++ +R      +F+E  TP++ A +    A+ F+   
Sbjct: 235 RQRYLDLIMNDSSRNVFVTRSKIVSYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHH 294

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                + + +  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ 
Sbjct: 295 NELNMNLF-MRIAPELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYA 352

Query: 245 EQDDILNTMENVLRGVFEEFSN 266
           +  D++N  E+++ G+ +  + 
Sbjct: 353 DVYDLMNVTEDLVSGLVKHVTG 374



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 4/96 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++      EI +     +        F      KE  ++           + + 
Sbjct: 485 PGLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQARQKEQGDDEAQMIDENFCTSLEY 544

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 545 GLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 580


>gi|238763361|ref|ZP_04624325.1| Asparaginyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238698460|gb|EEP91213.1| Asparaginyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 466

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 140/424 (33%), Gaps = 50/424 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSE 68
           G + V S V + GWV   R    GI F+ + D      + A  ++      +    + + 
Sbjct: 12  GRAAVDSEVTVRGWVRTRRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTTG 71

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G V++   E  +        E+ A  I+++   ++        + +      + 
Sbjct: 72  CSVEVTGTVVASPGEGQS-------FEIQATAIKVVGWVDDPDTYPMAAKRHSIEYLREV 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R + +      R  +  ++        +   STP++TAS  EGA +    S ++ 
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 189 --------------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q      AS   + +   P FR E+  + R  
Sbjct: 185 ENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYASALSKVYTFGPTFRAENSNTSRHL 244

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTD 289
            EF+ ++ E++F   DD+    E +L+ VF+   N       F   R+  D   R     
Sbjct: 245 AEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERVDKDAVDRLQRFV 304

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKI------------LSVNPGYEVWAIPAKGGGGN 337
             D    +   +  E  + S  +  + +                  ++   +        
Sbjct: 305 TSDFAQ-VDYTDAIEILLASGQKFENDVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI 363

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           +AF  RMNE        G       +   G    +G   +   +   +A    + +   D
Sbjct: 364 KAFYMRMNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKED 416

Query: 398 SCFF 401
             ++
Sbjct: 417 YWWY 420



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    +V+   
Sbjct: 347 EKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDAR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + +G++K      +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 407 LAEMGLNK----EDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRTPR 462


>gi|224541993|ref|ZP_03682532.1| hypothetical protein CATMIT_01166 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525050|gb|EEF94155.1| hypothetical protein CATMIT_01166 [Catenibacterium mitsuokai DSM
           15897]
          Length = 494

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 64/315 (20%), Positives = 125/315 (39%), Gaps = 23/315 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y   +  +L  S     V ++G +   R  G + F+++ D  G  Q+    D+   ++ +
Sbjct: 45  YGDKTAEELEESKP--AVSIAGRIVAKRRKGKVCFMNLLDRDGKIQLYIKKDTVGEDVYE 102

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            V+   +    G ++    E    +  TG++ +  +K   L+ A   PLP          
Sbjct: 103 LVKKSDL----GDIIGIDGEVFMTH--TGELTVRVEKYTHLTKALR-PLPEKFHGLTDTE 155

Query: 124 IRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFL 181
            RF+ R++DL  +    K    R +I+ S++  +  + + E  TPI+ +      A+ F+
Sbjct: 156 ERFRRRYVDLIMNDEARKVAFMRPKIVRSIQHYLDDKGYTEVETPIMNSILGGAAAKPFI 215

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                    FY L  A +   + L+  G D  ++I   FR+E       P EF  +++  
Sbjct: 216 THFNALDKDFY-LRIATELNLKRLIVGGMDAVYEIGRLFRNEGMDRTHNP-EFTTIEVYK 273

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY-GTDKP 291
           +F + + +++  E ++       +    V            F RI   DAI+   G D  
Sbjct: 274 AFSDLEGMMDLTEGIIANAAMTVNGTYDVEYKGHSISLAPGFKRISMVDAIKEKTGVDFG 333

Query: 292 DLRNPIIMHNVTEHF 306
           + +       + E  
Sbjct: 334 EQKTFEEAKKLAEEH 348



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 10/155 (6%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEE--KKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +A+E GI     F +  I++  F ++ EE   +      +P  +     ++L   D   
Sbjct: 343 KLAEEHGIEVEPHFAYGHIVNAFFEKYVEETIVEPTFVYGHPIEISPLAKKNL--QDPR- 399

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCG 532
               +++L   G E A+     +  +   + F+N    KE               A + G
Sbjct: 400 -FTQRFELFICGNEYANAFTELNDPDDQYERFANQLKEKELGNDEANEMDMDYVEALEYG 458

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +PP GG+  GIDR+VMLL G + +REV LFP  +N
Sbjct: 459 LPPTGGMGMGIDRLVMLLTGQETIREVILFPHMKN 493


>gi|163748443|ref|ZP_02155697.1| lysyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161332021|gb|EDQ02698.1| lysyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 502

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 69/328 (21%), Positives = 145/328 (44%), Gaps = 38/328 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRL-----------SGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           R H   D+  ++ G + ++           +G +   R      FL I+D  G  Q  A+
Sbjct: 37  RKHKAADIQ-AEYGQYTKVDLEGMAIQCSIAGRIMAKRGP----FLVIQDVSGRIQAYAS 91

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D     + K ++ +++    G ++  + +   +    G + ++ ++ ++L+ A   PLP
Sbjct: 92  KD-----VQKDLKEKFLGLDIGDIIGVTGQLHLSG--KGDLYVNMEEYQLLTKALR-PLP 143

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TA 171
                   +  R++ R++DL  +   +N  + R++++ ++R  MI + F+E  TP++ T 
Sbjct: 144 EKFHGLTDQETRYRQRYVDLIVNEESRNAFIMRSKVVAAIRNFMIKKEFMEVETPMMHTI 203

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R  
Sbjct: 204 PGGATARPFITHHNALDIEMY-LRVAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHN 261

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDA 282
            EF  ++  M++ +  D+++  E +L  +  E      +            ++R+   DA
Sbjct: 262 PEFTMMEFYMAYADYKDLMDLTEEMLSSIATELCGSPKLPYGEHTVDFGGPYVRLSMLDA 321

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           I++Y  D   +++ +    V +     +
Sbjct: 322 IKKYNPDNETIQS-MTYEEVKDVEFMRD 348



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E ++         P       + ND       +++    G E+A+G    + +E   Q F
Sbjct: 376 EPQLIQPTFITGYPVDISPLARRNDENHFITDRFEFFIGGREVANGFSELNDAEDQDQRF 435

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K+  ++          RA + G+PP  G   GIDR+VML      +R+V LFP 
Sbjct: 436 KAQVAAKDAGDDEAMFYDADYIRALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFPA 495

Query: 565 SQ 566
            +
Sbjct: 496 MR 497


>gi|50292609|ref|XP_448737.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528049|emb|CAG61700.1| unnamed protein product [Candida glabrata]
          Length = 591

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 111/268 (41%), Gaps = 13/268 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIAKS----VR 66
           G +     V ++G +H  R  G  + F  +  D   +  +    D A  E  ++    ++
Sbjct: 117 GETLPNEIVSIAGRIHAKRESGSKLKFYVLHGDGVEVQVMSQLQDYADAEAYENDHDLIK 176

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ ++G V      T       G+I +  ++IE+L+      LP        +  R+
Sbjct: 177 RGDIVGVEGYV----GRTQPKKGGEGEISVFVKRIELLTPCL-HMLPADHFGFKDQETRY 231

Query: 127 KYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +    K  + R++II  +R  +   +FIE  TP++   +        V   
Sbjct: 232 RKRYLDLIMNKDSRKRFITRSKIIKYIRKFLDNRDFIEVETPMMNVIAGGATAKPFVTHH 291

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            +      +  AP+ + + L+  G DR ++I   FR+E       P EF   +   ++ +
Sbjct: 292 NDLDMDMFMRIAPELFLKELVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYAD 350

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN 273
             D+++  E +   + +E +    +  +
Sbjct: 351 VYDLMDMTELLFSEMVKEINGSYVIKYH 378



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 4/121 (3%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E E         F  PQ      K +        ++++     EI +     +       
Sbjct: 455 ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTELNDPFDQRA 514

Query: 507 AFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F      K+  ++           A + G+PP GG   GIDR+ M L  +  +REV LF
Sbjct: 515 RFEEQARQKDQGDDEAQLIDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLF 574

Query: 563 P 563
           P
Sbjct: 575 P 575


>gi|124514753|gb|EAY56265.1| Lysyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 507

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 63/269 (23%), Positives = 112/269 (41%), Gaps = 18/269 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLCIDGLV 77
           R++G V  +R  G   F  ++D  G  Q+    D    E    +A+++     L ++G  
Sbjct: 69  RIAGRVVLLRRFGKAFFATLQDASGRFQIYVRKDHIGEEPYALLAETLDIGDHLGVEGTF 128

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                        TG+  L A  +  L  +   PLP           R++ R++DL  + 
Sbjct: 129 ---------FRTKTGEPTLDASHVTFLGKS-VHPLPEKWHGLTDIEQRYRQRYIDLIVNP 178

Query: 138 LHKNIVKRT-RIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALP 195
             +++  R  +I+ S+R  M    F+E  TP++  S     AR F+          Y L 
Sbjct: 179 DARDVFVRRGKILGSIRRFMEDRGFMEVETPMMHPSPGGALARPFVTHHNALDVDLY-LR 237

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + LM  GFD  F+I   FR+ +  S R   EF  ++  M++   +D++   E+
Sbjct: 238 IAPELYLKRLMVGGFDLVFEINRNFRN-EGFSPRHNPEFTMMEFYMAYHSPEDLMALTES 296

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           +   +  E    +  +    R+ +    R
Sbjct: 297 LFDRLAREIHGDSRFAYGEHRLDFAGPYR 325



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E  E EK +         P+      + +        +++L   G EIA+G +  +  
Sbjct: 378 LFE-EEIEKTLIQPTFVTGYPRSISPLARSSREDPEITDRFELFVAGVEIANGFMELNDP 436

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           +  L+ F +   S+   +           RA + G+PP  G   GIDR+VMLL    ++R
Sbjct: 437 DEQLRRFLSQQESRNSGDLEAPPPDMDYIRALEIGLPPTAGEGIGIDRLVMLLTNQHSIR 496

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 497 DVLLFPQMR 505


>gi|28209914|ref|NP_780858.1| asparaginyl-tRNA synthetase [Clostridium tetani E88]
 gi|38258347|sp|Q899M9|SYN_CLOTE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|28202349|gb|AAO34795.1| asparaginyl-tRNA synthetase [Clostridium tetani E88]
          Length = 463

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 68/428 (15%), Positives = 147/428 (34%), Gaps = 68/428 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
           +   + ++GW+   R      F+++ D       Q++ + +   F+    +     + ++
Sbjct: 17  INKDIVVAGWIRTERTSKNFGFIELNDGSFFKNLQIIIDTNLDNFDKVSKLPISSSIVVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G +++  +            E+ A K+ +   + +       ++ +          L  R
Sbjct: 77  GKLVATPS-------AKQPFEVQASKVTVEGTSLQDYPLQ--KKRHSFEFLRSIAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +T       R+    ++      +NF+   TPI+TAS  EGA +    + ++       
Sbjct: 128 SNTFSAVFRIRSLAAYAVHKFFQEKNFVYVHTPIITASDCEGAGEMFRVTTLDLNNIPKN 187

Query: 190 ---------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+   A      Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 DEGKIDFSQDFFDKDAKLTVSGQLSAESYALAFGNVYTFGPTFRAENSNTARHASEFWMI 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSNNFLR 276
           + EM+F +  D ++  E +++ +                            N V++ F R
Sbjct: 248 EPEMAFADLTDYMDVAEEMVKYIINYVLENAPEEMNFFNSFIDKDLFKRLDNVVNSEFKR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           I Y +A+          + P+   +   TEH  +   ++F K + V    +         
Sbjct: 308 ITYTEAVDLLQKSGEKFQYPVEWGIDLQTEHERYITEKIFGKPVFVTDYPKDI------- 360

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
              +AF  R+NE  ++     L          G    +G   +   +   E      D+ 
Sbjct: 361 ---KAFYMRLNEDNKTVAAADLLV-------PGVGEIIGGSQREERLDVLEERMKEFDLN 410

Query: 395 DGDSCFFI 402
           + D  +++
Sbjct: 411 EKDYWWYL 418



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 53/146 (36%), Gaps = 27/146 (18%)

Query: 427 INCNCF-EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           I    F +  ++ D+P        K I      F M           D  ++ A   DL+
Sbjct: 342 ITEKIFGKPVFVTDYP--------KDIKA----FYMR-------LNEDNKTVAAA--DLL 380

Query: 486 CNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
             G  EI  G  R    +V+ +      ++++             + G   H G   G +
Sbjct: 381 VPGVGEIIGGSQREERLDVLEERMKEFDLNEKDYW----WYLELRKYGSAKHSGFGLGFE 436

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCD 570
           RI+M + G  N+R+V  FP +    +
Sbjct: 437 RILMYMTGISNIRDVIPFPRTPGSAE 462


>gi|163939992|ref|YP_001644876.1| aspartyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163862189|gb|ABY43248.1| aspartyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 432

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL +RD  G+ Q V   + A ++
Sbjct: 5   MKRSLTREC----TEHGGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENELAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
           +               V+    E +  +     +E+ A ++++L+ AE LP  +  ++  
Sbjct: 61  VDVE-----------SVVQVVGEIVETSKTELGVEVLAHEVKVLNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKSTLVQSFGEFLIENDFTRVFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++           L+I
Sbjct: 228 ELGFINDFYEVMQLETDVLRYMFQQVGETCEKELQLLQI 266



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 26/166 (15%)

Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPF 459
           I  +  +  S   D      + LG      +  EF +I  +P             +   +
Sbjct: 285 ILKNKYRKESQIGDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KESRPMY 333

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
           TMP    E++  +         +DL+  G EI SG  R H  E++L +F   G+      
Sbjct: 334 TMPNKENEAITDS---------FDLLYKGLEITSGAQRIHNHEMLLASFKEKGLHP---- 380

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           ++F      F+ G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 381 DKFQSYVNTFRYGCPPHGGFGIGLERVVYKLLELSNVREASAFPRD 426


>gi|229115695|ref|ZP_04245100.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228667837|gb|EEL23274.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 432

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 19/273 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T          VG  V L GWV ++R  G + FL +RD  G+ Q V     A + 
Sbjct: 5   MKRSLT----QASTEHVGKVVLLQGWVKKIRHLGNVSFLLLRDRKGVIQCVLENKLAGY- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ I G ++  S   +        +E+ A ++++L+ AE+LP  +  ++  
Sbjct: 60  ---KVDVESVVQIVGEIVETSKTEL-------GVEVLAHEVKVLNGAEQLPFELNKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        +  +  S    +   +FI   TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERTAAIFKVKATLAQSFSDYLTENDFIRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+ +A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMTVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVS 271
           E+ F+ +  +++    +VLR +F++        
Sbjct: 228 ELGFIDDFHEVMQLETDVLRYMFQQVGETCEKE 260



 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 63/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     S+  
Sbjct: 297 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTMPNNENPSITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  +++L +F   G+       +F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYDLLLASFKEKGLHP----EKFQSYLNTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|322823627|gb|EFZ29340.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 564

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 68/288 (23%), Positives = 118/288 (40%), Gaps = 18/288 (6%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRS 67
           L    VG  V +   V   R  G + F+ +RD     Q +A    +      +    +  
Sbjct: 86  LTKEHVGKTVTVRARVDTTRKKGKLAFMVLRDGTDSIQAMAAVAEDVPKEMVDFIGQIPC 145

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPLPVFGEREYPE-- 122
           E ++ ++ +V     E    +    +IEL   KI +LS A       L     RE  E  
Sbjct: 146 ESIVDVEAIVCGV--EQPITSTSQQEIELKVNKIHVLSEALRVLPFTLEDASRRETDEGI 203

Query: 123 ----SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                 R   R+LDLR    +     ++R+    R  ++  +F+E  +P + A++ EG  
Sbjct: 204 KINFDTRLGCRWLDLRTPASNAIFKVQSRVGQYFRQFLMDHDFVEIHSPKIIAAASEGGA 263

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +       N+ ++ A  Q+PQ YKQ+ +     R F++ P FR E+  + R   EF  LD
Sbjct: 264 NVFKVGYFNRDAYLA--QSPQLYKQMALQGDLKRVFEVGPVFRAENSNTHRHLTEFVGLD 321

Query: 239 MEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +EM   E   ++L+T E +   +F + +          R    + +  
Sbjct: 322 VEMRINEHYYEVLDTAEELFCYMFAQLAKHTGELEAICRQYPFEPLLW 369



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 13/119 (10%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
             A   +TMP    E    +         YD+   G EI+SG  R H S ++L+   ++G
Sbjct: 459 TAARPFYTMPFPDDERFTNS---------YDMFIRGEEISSGAQRIHDSSLLLKRARSLG 509

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +    +++       +F+ G  PHGG   G++R+VML LG  NVR VSLFP        
Sbjct: 510 VDLSPIKD----YVDSFRLGAWPHGGFGVGLERVVMLYLGLSNVRLVSLFPRDPQRVTP 564


>gi|161611325|ref|NP_967990.2| asparaginyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
          Length = 463

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 71/412 (17%), Positives = 134/412 (32%), Gaps = 66/412 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   V LSGWV ++R      F+++ D       QVV + + A F    ++     
Sbjct: 13  TEKHLDKEVYLSGWVRKIRDQKNFGFIELNDGTFFKGVQVVFDNNLANFADVAALSISSS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G V+       +        E+ A KIEI+  A+         + +      +   
Sbjct: 73  VLVTGKVVKSQGAGQS-------FEVMASKIEIVQKADLEYPLQ--NKRHSMEFLREIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++      +NF+  +TPI+T S  EGA +    + +    
Sbjct: 124 LRPRTNTFSAVFRVRSVLAYAIHKFFNEQNFVYVNTPIITGSDAEGAGEMFRVTTLKLDK 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       + F   +   P FR E+  + R   E
Sbjct: 184 PPRKEDGSIDASQDFFGKETNLTVSGQLNGETFCAAFRNIYTFGPTFRAENSNTSRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +    +   E++++ +             F                   
Sbjct: 244 FWMIEPEIAFADLTANMELAEDMIKYIIRYVMEQCPEEMEFFNQFVEKGLFDKLNNVLNN 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+   +   +EH  +     F K + V    +     
Sbjct: 304 NFGRVTYTEAIDILLKCGKKFEYPVQWGIDMQSEHERYLAEEHFKKPVFVTDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNE-----WARSQGQPGLAYIFWRLDESGNVAGMGPVAK 377
                  +AF  ++NE      A     PG+  I        N+  +    K
Sbjct: 361 -------KAFYMKLNEDGKTVRAMDLLAPGIGEIIGGSQREDNLEKLESRMK 405



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 53/147 (36%), Gaps = 26/147 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P        K I      F M           D  +++A  
Sbjct: 338 HERYLAEEHFKKPVFVTDYP--------KDIKA----FYMK-------LNEDGKTVRAM- 377

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  EI  G  R    E +      VG+        +       + G  PH G  
Sbjct: 378 -DLLAPGIGEIIGGSQREDNLEKLESRMKQVGLHP----EEYSFYTDLRRYGTFPHAGYG 432

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G +R++M + G  N+R+V  FP +  
Sbjct: 433 LGFERMLMYVTGMGNIRDVIPFPRTPK 459


>gi|91079194|ref|XP_968957.1| PREDICTED: similar to Aspartyl-tRNA synthetase CG3821-PA [Tribolium
           castaneum]
 gi|270003601|gb|EFA00049.1| hypothetical protein TcasGA2_TC002857 [Tribolium castaneum]
          Length = 533

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 66/283 (23%), Positives = 114/283 (40%), Gaps = 23/283 (8%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA----CFEIAK 63
              +L  S  G+ V +   +H VR  G   F+ +R      Q++ N          + A 
Sbjct: 78  YVKELNKSLAGNDVWVRARLHTVRARGKQCFIVLRQREFTVQLLLNVSETVSKSMVKFAS 137

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--------EELPLPVF 115
           ++  E ++ ++  V+     T  A      +EL A +I ++S +        E+   P  
Sbjct: 138 NITKESIIDVEAKVVQVP--TPIAACSQQDVELLASQIWVVSASAPQLPLQIEDASRPEK 195

Query: 116 GER------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           G+          +  R   R LDLR  T          +    R  +  + F E  TP +
Sbjct: 196 GDEAEGLNIRVNQDTRLDNRVLDLRTPTNQAIFRLEAGVCRLFREVLTRKGFTEIHTPKI 255

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             ++ EG  +    S     ++ A  Q+PQ YKQ+ +A+ FD+ F I   FR ED  + R
Sbjct: 256 IPAASEGGANVFTVSYFKGSAYLA--QSPQLYKQMAIAADFDKVFTIGAVFRAEDSNTHR 313

Query: 230 LPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVS 271
              EF  LD+EM+F     +++  + N    +F+   +     
Sbjct: 314 HLTEFTGLDLEMAFNYHYHEVMLLIGNSFTEIFKGLRDQYQTE 356



 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF TMP                +  YD+   G EI SG  R H  +++ +   
Sbjct: 425 KYPLAVRPFYTMPDPE---------TPRSSNSYDMFMRGEEILSGAQRIHDPQLLTERAK 475

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           + GI       +      AF+ G PPH G   G++R+VML LG  N+R+  +FP      
Sbjct: 476 HHGIDL----KKIASYIDAFKYGCPPHAGGGIGLERVVMLYLGLDNIRKTCMFPRDPKRI 531

Query: 570 DL 571
             
Sbjct: 532 TP 533


>gi|323497778|ref|ZP_08102792.1| lysyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323317125|gb|EGA70122.1| lysyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 505

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 61/285 (21%), Positives = 128/285 (44%), Gaps = 25/285 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R      FL I++  G  Q  A  D     + K+++ ++     G ++  
Sbjct: 68  VAIAGRIMAKRGP----FLVIQETSGRIQAYAAKD-----VQKALKEKYQGLDIGDIIGV 118

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                 +    G + ++ ++ E+L+ A   PLP        + +R++ R++DL  +   +
Sbjct: 119 KGALHKSG--KGDLYVNMEEYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNQDSR 175

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
              + R+++++S+R  M ++ ++E  TP++        AR F+          Y L  AP
Sbjct: 176 EAFIIRSKLVSSIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDMY-LRVAP 234

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GFDR F+I   FR+E   S R   EF  ++   ++ +  D+++  E +L 
Sbjct: 235 ELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLS 293

Query: 259 GVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
            V  +     ++            + R+   +AI+ Y  D  +++
Sbjct: 294 TVAMDVLGSTSMPYGEETVEFGGTYARMSMFEAIKHYNPDHAEIQ 338



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E ++         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 381 EPQLIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 440

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                +K+  ++           A + G+PP  G   GIDR+ ML      +R+V LFP
Sbjct: 441 KAQVDAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFP 499


>gi|78485071|ref|YP_390996.1| lysyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|78363357|gb|ABB41322.1| lysyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 504

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 60/278 (21%), Positives = 121/278 (43%), Gaps = 19/278 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+++G +   R  G   F  ++D +G  Q+    D        +   +W L        
Sbjct: 66  RVKVAGRMLLRRIMGKASFATLQDTHGRIQIYVTRDELPEGFYNTQFKKWDLGDI----- 120

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
             AE       TG++ +  + IE+++ +   PLP        + I+++ R++DL  +   
Sbjct: 121 VGAEGYLFKTNTGELSVHVEHIELITKSLR-PLPDKFHGLQDQEIKYRQRYVDLIVNEES 179

Query: 140 KN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
           ++  + R++I+  +R  +I + F+E  TP++        A+ F           Y L  A
Sbjct: 180 RDTFMIRSKIVQHVRNFLINKGFMEVETPMMHVIPGGATAKPFHTHHNALDMPLY-LRIA 238

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  GF++ F+I   FR+E   +   P EF  ++   ++ + + +++  E +L
Sbjct: 239 PELYLKRLVVGGFEKVFEINRSFRNEGLSTRHNP-EFTMVEFYSAYTDYNQLMDYTEELL 297

Query: 258 RGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           + + E     + V            F R+   DAI +Y
Sbjct: 298 KELAELTVGSSQVPYQGQVFDFGKPFARLTMKDAILKY 335



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 7/131 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           +E   EEK +D      T     +  L + ND       +++L   G E+A+G    + +
Sbjct: 375 FEETAEEKLMDPTF--ITEYPAEVSPLARRNDDNPFITDRFELFIGGRELANGFNELNDA 432

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   + F     +K+  ++           A + GMPP  G   GIDR+VML      +R
Sbjct: 433 EDQAERFKAQVEAKDAGDDEAMHYDEDYIVALEHGMPPTAGEGIGIDRLVMLFTDKPTIR 492

Query: 558 EVSLFPMSQNF 568
           +V LFP  +  
Sbjct: 493 DVLLFPHMRQA 503


>gi|86132072|ref|ZP_01050668.1| lysyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85817406|gb|EAQ38586.1| lysyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 564

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 63/340 (18%), Positives = 125/340 (36%), Gaps = 31/340 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDG 75
           G  V ++G +   R  G   F +I+D  G  QV  N D  C   + +K       L   G
Sbjct: 46  GEKVVMAGRLMSRRIQGNASFAEIQDGEGRIQVYFNRDEICTGEDKSKYNEVYKKLLDIG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKY 128
             +    E     +  G+I +  +   +LS A +       + E           +R++ 
Sbjct: 106 DFIGIEGEMFTTKV--GEITVLVKDFTLLSKALKPLPQPRTDDEGKVHDAFTDPEMRYRQ 163

Query: 129 RFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R++DL     + +  VKRT++ N+MR       + E  TP+L   +   A    +    +
Sbjct: 164 RYVDLTVNPHVKEVFVKRTKLFNAMRNFFNDAGYFEVETPVLQPIAGGAAARPFITHHNS 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
                 +  A + Y + L+  GF+  ++ +  FR+E       P EF  +++ +++ + +
Sbjct: 224 LDMPLYMRIANELYLKRLIVGGFEGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKDYN 282

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTE 304
            +++  E +L       +     +              +G  + D + P   + M +  +
Sbjct: 283 WMMDFCEQLLETCAIAVNGTTEAT--------------FGEHEVDFKAPYARVTMADSIK 328

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           HF   +         +    E   I      G     D +
Sbjct: 329 HFTGFDING-KTEDEIRAAAEGMGIEVDDTMGKGKLIDEI 367



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 8/131 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 373 EGNYIQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSELNDPIDQRERF 432

Query: 509 SNVGISKEVVENRF-----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                  +  ++           R+ + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 433 EAQLELAKRGDDEATASIDYDFLRSLEYGMPPTSGMGIGMDRLIMFLTNNQSIQEVLFFP 492

Query: 564 MS---QNFCDL 571
                +   DL
Sbjct: 493 QMKPEKKALDL 503


>gi|315453704|ref|YP_004073974.1| lysyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132756|emb|CBY83384.1| lysyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 496

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 66/306 (21%), Positives = 127/306 (41%), Gaps = 14/306 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +  ++T + G     D  S   L G V  +R  G   FL I D   + QV  + +    E
Sbjct: 39  LEAFKTLTEGQ---KDPASSHALVGRVRFIRLMGKACFLKIEDQSALVQVYLSQNDLGKE 95

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              S +    + +  +V     E       T ++ L A   +IL+ A  +PLP       
Sbjct: 96  AFDSFKKC--VEVGDIVN---VEGYPFVTKTNELSLHATSYKILTKA-IVPLPEKFHGLS 149

Query: 121 PESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-AR 178
              +R++ R++DL     + +    R++I+  +R     + F+E  TP++   +    AR
Sbjct: 150 DIELRYRQRYVDLIANPEVKEVFKTRSQIVAIIRRFFEQKGFLEVETPMMHPIAGGANAR 209

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+      +   Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  L+
Sbjct: 210 PFITYHNALEVERY-LRIAPELYLKRLVVGGFEAVFEINRNFRNEGMDHSHNP-EFTMLE 267

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              ++   +D++   + +   + +  +    ++     I +  AIR  G  +  +    +
Sbjct: 268 FYWAYKTYEDLIALTKELFEELLQALNLPTQITYQEHTIDFS-AIRVLGFKQALIEIGGL 326

Query: 299 MHNVTE 304
            +++ E
Sbjct: 327 ENSIVE 332



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + ND     A +++L   G EIA+G    +      Q F
Sbjct: 367 ESKLINPTFITEYPIEISPLARRNDTDPNIADRFELFIAGKEIANGFSELNDPLDQYQRF 426

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +KE  +            A   GMPP  G   GIDR+VMLL  +K +++V LFP 
Sbjct: 427 EEQVRAKESGDEEAQFMDSDYVWALGHGMPPTAGEGIGIDRLVMLLTNSKTIKDVILFPA 486

Query: 565 SQ 566
            +
Sbjct: 487 MK 488


>gi|167855563|ref|ZP_02478324.1| asparaginyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853309|gb|EDS24562.1| asparaginyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 467

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 75/404 (18%), Positives = 135/404 (33%), Gaps = 56/404 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D       Q + N D +
Sbjct: 1   MSKFPTISEILSGKVAVGEEVAVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDLS 60

Query: 58  CF-EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
            + +    + +   + + G+++   AE          +EL A+ +E++   E+       
Sbjct: 61  NYQDEVLRLTAGCSVIVTGVIVESPAEGQA-------VELQAKSVEVVGWVEDPDTYPMA 113

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + +      +   L  R + +      R  +  ++      + F   +TP++TAS  EG
Sbjct: 114 AKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEG 173

Query: 177 ARDFLVPSRVNQG--------------SFYA---LPQAPQQYKQLLMASGFDRYFQIAPC 219
           A +    S ++                 F+          Q      A    + +   P 
Sbjct: 174 AGEMFRVSTLDLENLPRGEDGKVDFSQDFFGRESFLTVSGQLNGETYACALSKVYTFGPT 233

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------- 266
           FR E+  + R   EF+ ++ E +F    D     E++L+ VF                  
Sbjct: 234 FRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFRAVLEERKDDLKFFEKHV 293

Query: 267 --------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK 316
                    N ++++F +I Y DAI        D   P+   +   +EH        F  
Sbjct: 294 DNTVISRLENFINSDFAQIDYTDAIEVLLKSGKDFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + V    +            R   D     A     PG+  I 
Sbjct: 354 PVVVKNYPKDI-----KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+ +    +G++       +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDKRMVEMGLNP----EDYWWYRDLRR 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+REV  FP +  
Sbjct: 427 YGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRAPR 463


>gi|148270135|ref|YP_001244595.1| lysyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|281412523|ref|YP_003346602.1| lysyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|166230599|sp|A5ILE6|SYK_THEP1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|147735679|gb|ABQ47019.1| lysyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|281373626|gb|ADA67188.1| lysyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 502

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 69/323 (21%), Positives = 129/323 (39%), Gaps = 23/323 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y     G++  S     +  +G V  +R HG   F  ++D  G  Q     DS   E 
Sbjct: 39  EKYDYLQAGEVLES---EKLSFAGRVMSIRHHGKTAFFHMKDDTGRIQAYVRADSVGKEK 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
               +    +                   TG++ +  Q+  +LS A   PLP        
Sbjct: 96  MDLFKRHVKIGD-----FIGVRGFPFKSKTGELTIYVQEYTLLSKALR-PLPEKWHGIKD 149

Query: 122 ESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
           + I ++ R+L+L   D   +   KR + +  +R  + +  FIE  TPIL   +    AR 
Sbjct: 150 KEIIYRQRYLELIVSDEAIERFRKRFKAVQVIREFLNSRGFIEVETPILHYVTGGAEARP 209

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+    V     Y L  AP+ Y + L+  GF++ ++I   FR+E       P EF  +++
Sbjct: 210 FVTHLNVFDIDMY-LRIAPELYLKRLIIGGFEKIYEIGKNFRNEGISYKHSP-EFTSIEI 267

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR----------YGTD 289
             ++ + +D+++  E ++  V +       +S     I +    +R           G D
Sbjct: 268 YQAYADYNDMMDLTEELIVEVVKRTCGTLKISYQGKEIDFTPPWKRVRMRDFLKEKLGVD 327

Query: 290 KPDLRNPIIMHNVTEHFVHSEFR 312
             +  + +++  + E+ V  E +
Sbjct: 328 ILEDPDEVLLKKLEEYGVELEIK 350



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 55/152 (36%), Gaps = 26/152 (17%)

Query: 417 RNHIAQEL-GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           R H+  +L  ++        +I+D P               +P          L      
Sbjct: 352 RAHLIDKLRDLVEEELVNPTFIIDHP------------VVISPLAKRHREDPRL------ 393

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQC 531
                +++L+  G EIA+     +      Q F      +E  +           RA + 
Sbjct: 394 ---TERFELIIFGREIANAFSELNDPVDQYQRFLEQAKMREEGDEEAHMMDLDFVRALEY 450

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP GG+  G+DR+ M +  +  +R+V  FP
Sbjct: 451 GMPPTGGLGIGLDRLFMFITDSPTIRDVIPFP 482


>gi|169769871|ref|XP_001819405.1| lysine--tRNA ligase KRS1 [Aspergillus oryzae RIB40]
 gi|238487798|ref|XP_002375137.1| lysyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|83767264|dbj|BAE57403.1| unnamed protein product [Aspergillus oryzae]
 gi|220700016|gb|EED56355.1| lysyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 604

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 61/288 (21%), Positives = 120/288 (41%), Gaps = 17/288 (5%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIA-----KSVRSEWVL 71
              VR++G ++  R  G  +IF DIR      QVV    +A  +++     + +R   V+
Sbjct: 122 DKTVRIAGRIYTKRSSGAKLIFYDIRAEGVKVQVVCQAQNAAGDVSFEAQHEHLRRGDVV 181

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G        +   N   G++ + A +I +L+      +P        +  RF+ R+L
Sbjct: 182 GIVGF----PGRSNPKNRPDGELSIFASEIVLLAPCL-HAIPSEHYGFQDKEQRFRQRYL 236

Query: 132 DLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL  +   +N  V R++I++ +R      +F+E  TP++ A +        V    +   
Sbjct: 237 DLIMNDRSRNVFVTRSKIVSYIRNFFDTRDFVEVETPMMNAIAGGATAKPFVTHHNDLDM 296

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              +  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++
Sbjct: 297 NLFMRVAPELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVM 355

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           N  E ++ G+ +  + G     +                 P  R  +I
Sbjct: 356 NLTEELVSGLVKHVTGGYETVFH----TQTGEEYNVNWKAPWRRVEMI 399



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 4/95 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++      EI +     +        F      K+  ++           + + G
Sbjct: 483 GLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQARQKDQGDDEAQLIDENFCTSLEYG 542

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 543 LPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 577


>gi|302345865|ref|YP_003814218.1| asparagine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302149547|gb|ADK95809.1| asparagine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 463

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 57/290 (19%), Positives = 113/290 (38%), Gaps = 26/290 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE 60
             RT     L  +D G  + + GWV   R    + F+ + D   I   QVV +P +   +
Sbjct: 1   MKRTKIVDALACTDFGKDINVKGWVRSHRSSKAVDFIALNDGSTIKNIQVVVDPSTIDED 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             KS+ +   + + G ++        +       E+  ++IEI  +      P+  + + 
Sbjct: 61  KLKSITTGACISVIGTLVESQGAGQTS-------EIQCKEIEIYGLC-PSDYPMQKKGQS 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KY  + LR +T       R  +  ++        F    TP++T S  EGA + 
Sbjct: 113 FEYMR-KYGHMRLRTNTFGAVFRIRHNMAIAIHQYFHEHGFYYFHTPLITGSDAEGAGNM 171

Query: 181 LVPSRVNQG------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDP 225
              + ++               F+          Q +  L A+     +   P FR E+ 
Sbjct: 172 FQVTTLDLDRVAKGGEVDYSADFFGKRTNLTVSGQLEGELGATALGAIYTFGPTFRAENS 231

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + R   EF+ ++ E++F+++D++++  E+ ++               FL
Sbjct: 232 NTPRHLAEFWMVEPEVAFIDKDELMDLEEDFIKYCVRWALENCKDDLEFL 281



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 74/227 (32%), Gaps = 33/227 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
               + P    ++      +                 D L+F +   D    IA+  G++
Sbjct: 239 EFWMVEPEVAFIDKDELMDLEEDFIKYCVRWALENCKDDLEFLNKMIDKEL-IARLEGVL 297

Query: 428 NCN---------------------CFEFCWIMDFPFYEWNEEEKKIDFAH--NPFTMPQG 464
             +                      FEF  I  +     +E E+ +   H   P  M   
Sbjct: 298 KEDFARLTYTEGFEILQKAAADGVKFEFP-ITHWGMDLSSEHERYLVEEHFKRPVIMTDY 356

Query: 465 GME----SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
             E     +K N+          L     EI  G +R    E +++   + G+ +    +
Sbjct: 357 PSEIKSFYMKKNEDGKTMQGTDVLFPRIGEIIGGSVREESYEKLVEEIESRGMKR----D 412

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            +       + G  PHGG   G +R+++ + G +N+R+V  F  +  
Sbjct: 413 IYDWYLDTRKYGTCPHGGFGLGFERLILFVTGMQNIRDVIPFARTPK 459


>gi|121699116|ref|XP_001267916.1| lysyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119396058|gb|EAW06490.1| lysyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 609

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 61/293 (20%), Positives = 119/293 (40%), Gaps = 17/293 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DSACFEIAKSVR 66
           G       VR++G ++  R  G  + F DIR      QVV        D       + +R
Sbjct: 117 GEQKPDVTVRIAGRIYTKRSSGSKLFFYDIRAEGVKVQVVCQAQNATGDVPFEAQHEHLR 176

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ I G        T   N   G++ + A ++ +L+      +P        +  RF
Sbjct: 177 RGDIVGIVGF----PGRTSPKNRADGELSIFATEVVLLAPCL-HAIPSEHYGFQDKEQRF 231

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +   +N  V R++I++ +R    + +FIE  TP++ A +        V   
Sbjct: 232 RQRYLDLIMNERSRNVFVTRSKIVSYVRNYFDSRDFIEVETPMMNAIAGGATAKPFVTHH 291

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            +      +  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +
Sbjct: 292 NDLDMNLFMRVAPELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYAD 350

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
             D++N  E ++ G+ +  + G   + +         +       P  R  +I
Sbjct: 351 VYDVMNLTEELISGLVKHVTGGYETTFH----TQSGEVYNVNWKAPWRRVEMI 399



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 4/96 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
           S    +++      EI +     +        F      K+  ++           + + 
Sbjct: 482 SGLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQARQKDQGDDEAQLIDENFCTSLEY 541

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 542 GLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 577


>gi|296111614|ref|YP_003621996.1| lysine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295833146|gb|ADG41027.1| lysine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 493

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 77/347 (22%), Positives = 138/347 (39%), Gaps = 25/347 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--I 61
           Y + +  +L  +     V ++G +   R  G +IF D RD  G  QV A  D       I
Sbjct: 47  YDSSTLEELEKTP--HEVIIAGRMVAKRGAGKVIFADFRDVSGKIQVYAKRDDLAENYPI 104

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K       L I G++M   A         G++ + A ++  L+ A   P+P        
Sbjct: 105 IKRADLGDFLGIKGIMMKTEA---------GELTILATELTHLTKALR-PMPDKFHGIAD 154

Query: 122 ESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
              R++ R+LDL  +         R++II+++R  M +++F+E  TPIL T +    AR 
Sbjct: 155 VETRYRKRYLDLIANEESFKKFQLRSKIISAIRAYMDSQDFMEVETPILQTEAGGAAARP 214

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y +  A + Y + L+  GF+R ++I   FR+E       P EF  ++ 
Sbjct: 215 FITHHNALNIDMY-MRIATELYLKRLVVGGFERVYEIGRIFRNEGMDPKHNP-EFTTMET 272

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++++  D++N  E + +      S+        L++ Y       GT         ++
Sbjct: 273 YAAYMDFTDVMNETEGIFKAAASVVSDD-------LKVTYQGTEIDLGTKFARKHMVDLI 325

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
              T      +  V +     +  +  +      G    AF +   E
Sbjct: 326 KEQTGIDFWQDMTVETAQKLADDKHVKYEKYWDVGHIINAFFEEFVE 372



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 51/330 (15%), Positives = 104/330 (31%), Gaps = 29/330 (8%)

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++++  D +     +L+        G   +  F+       I  Y     +L    ++  
Sbjct: 188 AYMDSQDFMEVETPILQT-----EAGGAAARPFITHHNALNIDMYMRIATELYLKRLVVG 242

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG-LAYIF 360
             E          ++ +      E   +       +  F D MNE          +    
Sbjct: 243 GFERVYEIGRIFRNEGMDPKHNPEFTTMETYAAYMD--FTDVMNETEGIFKAAASVVSDD 300

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
            ++   G    +G   K       + I+ +  +   D    +  +              +
Sbjct: 301 LKVTYQGTEIDLG--TKFARKHMVDLIKEQTGI---DFWQDMTVETA----------QKL 345

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A +  +     ++   I++  F+E   E+  I               + +  D       
Sbjct: 346 ADDKHVKYEKYWDVGHIINA-FFEEFVEDTLIQPTFVYGHPVSVSPLAKRNADDDRF-TD 403

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPH 536
           +++L   G E  +     +        F      +E   +   G       A + GMPP 
Sbjct: 404 RFELFIMGSEYGNAFTELNDPIDQRARFEAQVAERENGNDEAEGIDEDFIEALEYGMPPT 463

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           GG+  GIDR++MLL  +  +R+V LFP  +
Sbjct: 464 GGLGIGIDRLIMLLTDSDTIRDVLLFPTMR 493


>gi|255086717|ref|XP_002509325.1| predicted protein [Micromonas sp. RCC299]
 gi|226524603|gb|ACO70583.1| predicted protein [Micromonas sp. RCC299]
          Length = 566

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 66/317 (20%), Positives = 127/317 (40%), Gaps = 25/317 (7%)

Query: 5   RTHSCGDL---------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           RTH+   L         G    G+   + G V   R  G + FL + D  G  Q+  +  
Sbjct: 83  RTHTATQLQSIHKDLADGAEVEGTVEAVCGRVKARRVFGKLAFLSLEDDGGSIQLYCDKK 142

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                   + +    L   G ++             G++ ++    E+L+ +  LPLP  
Sbjct: 143 RIDAVTPGAFKRIVDLVDMGDIVGARGTVKRTE--KGELSIAVDSFEMLTKSL-LPLPDK 199

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASS 173
            +      +R++ R++DL     +      R  I++ +R  +    F+E  TP+L T + 
Sbjct: 200 FKGLTDVEMRYRQRYVDLIANPEVRDTFRARAGIVSGIRRFLDDRAFMEMETPVLETRAG 259

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F        G    L  A + + + L+  GF+R +++   FR+E   +   P E
Sbjct: 260 GADAKPFNTFHNAL-GMNLTLRIATELHLKRLVVGGFERVYEMGRIFRNEGISTRHNP-E 317

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ +  D+L   E ++    E  + G       L+I Y D +   G  +P  
Sbjct: 318 FTSVEVYQAYADVSDMLELTEEMICYCCERANGGA------LKIQYGDELIDLGQ-RPWR 370

Query: 294 RNPIIMHNVTEHFVHSE 310
           R P  M+++ +     +
Sbjct: 371 RAP--MNDLVKEAAGVD 385



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 46/130 (35%), Gaps = 12/130 (9%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS--IKAFQYDLVCNGFEIASGGIRNH 499
            +E   E K        F +      S       +      +++L   G E+A+      
Sbjct: 435 MFEATVETKLRQPT---FVLDHPVEISPLAKPHRAKPGVTERFELFIVGRELANSFSELT 491

Query: 500 MSEVMLQAFSNVGISKEVVENRF------GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
              V  +      I     E              A + GMPP  G+  G+DR+VMLL  +
Sbjct: 492 DP-VDQRTRLESQIETHRYEAELYPIAMDEDFVTALEYGMPPTAGMGLGVDRLVMLLTNS 550

Query: 554 KNVREVSLFP 563
            ++R+V  FP
Sbjct: 551 ASIRDVIAFP 560


>gi|212550983|ref|YP_002309300.1| lysyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|254782469|sp|B6YRR7|SYK_AZOPC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|212549221|dbj|BAG83889.1| lysyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 500

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 65/333 (19%), Positives = 124/333 (37%), Gaps = 22/333 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G + F++++D  G  Q+    DS C    K +       +  +   
Sbjct: 49  EVSVAGRMMSRRIMGKVSFVELQDSVGRIQLYIKCDSLCPNENKDLYYIVFKKLLDIGDF 108

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------YPESIRFKYRFLDL 133
              +       TG+I +    + +LS +      V  +            +R++ R++DL
Sbjct: 109 IGIKGYVFCTQTGEISIHVNSLTLLSKSLRPLPIVKSKDGMTYDSYNDVELRYRQRYVDL 168

Query: 134 RRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   K+I  KRT+I NS+R     + +IE  TP+L +      AR F+          
Sbjct: 169 IVNEGTKDIFLKRTKIFNSVRSFFNEKGYIEVDTPVLQSIPGGAAARPFVTHHNALDIPC 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  A + Y + L+  GF+  ++ +  FR+E       P EF  +++ +S+ +   ++N
Sbjct: 229 Y-LRIANELYLKRLIVGGFEGVYEFSRNFRNEGIDKVHNP-EFTVVEVYVSYKDYKWMMN 286

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E +L  +  E                +  I  Y  +       I M +V E       
Sbjct: 287 FTEQMLEHICIEILG-----------STELKIGEYIINFKAPYRRITMIDVIEENTGVNI 335

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
              ++   +        I       +    D +
Sbjct: 336 AGMNE-NQLREVCRFLHIEEDKTMSSGKLIDEI 367



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K          P+      K +   +    +++L+ NGFE+A+     +      + F
Sbjct: 373 EWKYIQPTFIIDYPKEMSPLCKCHRQNAELTERFELIVNGFELANAYSELNDPIDQRKRF 432

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +     +  +N          RA + GMPP  G+  G+DR+VMLL    +++EV LFP 
Sbjct: 433 EDQLKLSKKGDNEAMFIDQDFLRALEYGMPPTSGMGIGMDRLVMLLTKQTSIQEVLLFPH 492

Query: 565 SQ 566
            +
Sbjct: 493 MR 494


>gi|160889278|ref|ZP_02070281.1| hypothetical protein BACUNI_01700 [Bacteroides uniformis ATCC 8492]
 gi|156861285|gb|EDO54716.1| hypothetical protein BACUNI_01700 [Bacteroides uniformis ATCC 8492]
          Length = 576

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 56/291 (19%), Positives = 117/291 (40%), Gaps = 10/291 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +         V ++G +   R  G   F++++D  G  QV    D  C + 
Sbjct: 36  NAFSTDIKAEFNDDAEPRQVSVAGRIMSRRIMGKASFIELQDSKGRIQVYITRDDICPDE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + A+K+ +L+ + +    V  +    
Sbjct: 96  DKEMYNTVFKRLLDLGDFIGIEGFVFRTQMGEISIHAKKLTVLAKSIKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R++DL  +  + +  +KR  +I +MR  +    + E  TPIL +   
Sbjct: 156 YDSFEDPELRYRQRYVDLIVNDGVKEKFLKRATVIKTMRAVLDEAGYTEVETPILQSIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+  GF+  ++I   FR+E    +  P E
Sbjct: 216 GASARPFITHHNSLDMDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           F  +++ + + + + +++  E +L  +    +       +   I +    R
Sbjct: 274 FTCMELYVQYKDYNWMMSFTEKLLERICIAVNGCTETEIDGKTISFKAPYR 324



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 86/259 (33%), Gaps = 45/259 (17%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W  S  +  L  I   ++        G             I   +  + G D       +
Sbjct: 288 WMMSFTEKLLERICIAVNGCTETEIDGKTISFKAPYRRLPILEAIKEKTGYDLEGKSEDE 347

Query: 406 PLKFCSFAADARNHIAQELG---IINCNCFEFC--------WIMDFPFYEWNEEEKKIDF 454
             + C         I   +G   +I+    EFC        +I D+P             
Sbjct: 348 IRQVCKELN---MEIDDTMGKGKLIDEIFGEFCEGTFIQPTFITDYP------------V 392

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             +P T        L           +++L+ NG E+A+     +      + F +    
Sbjct: 393 EMSPLTKMHRSKPGL---------TERFELMVNGKELANAYSELNDPIDQEERFKDQLRL 443

Query: 515 KEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            E  ++          +A Q GMPP  GI  GIDR+ ML+ G   ++EV  FP  +    
Sbjct: 444 SEKGDDEAMFIDQDFLKALQYGMPPTSGIGIGIDRLTMLMTGESFIQEVLFFPQMRPEKV 503

Query: 571 LLMGSPSTVSVEQLRELGL 589
           +   +P+  +     ELG+
Sbjct: 504 IPKDAPARYT-----ELGI 517


>gi|224372928|ref|YP_002607300.1| lysyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223590008|gb|ACM93744.1| lysyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 502

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 69/339 (20%), Positives = 137/339 (40%), Gaps = 23/339 (6%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D      ++G V  +R  G   F  I D  GI QV  + +    E+             G
Sbjct: 53  DENRKFTVAGRVKFLRLMGKAAFFKIEDMTGILQVYMSKN----ELGDKFNLLKKNLEVG 108

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++  +         TG++ + A  ++IL+ A   PLP           R++ R+LD+  
Sbjct: 109 DIVEVTGYPFVTK--TGELSIHADDVKILTKA-IHPLPEKFHGLQDVETRYRQRYLDMIM 165

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193
           +   ++    R++I++ +R   +   F+E  TP+L T      AR F+            
Sbjct: 166 NKDVRDTFLLRSKIVSLVREFFLKHGFLEVETPMLHTVVGGANARPFMTHHNALDIDM-N 224

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ + + L+  GF+  F++   FR+E       P EF  ++   ++  ++D++   
Sbjct: 225 LRIAPELFLKRLIVGGFEAVFELNRNFRNEGIDHTHNP-EFTMIEFYWAYHTKEDLMKLT 283

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVHSEFR 312
           + +   +FE+ +    +    + I +D+            R+  I + NV E  +  +  
Sbjct: 284 KELFDYLFEKLNLPKKLQYGDMVIDFDN------WTTITYRDSLIKIGNVPEEILE-DVN 336

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
              K L  +       I +KG    + + +  +E+  S+
Sbjct: 337 AMKKYLKDHGVELEEHIDSKG----KLWAELFDEFVESK 371



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 27/157 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                 +  E   +     +  ++ DFP  E +   ++                    +D
Sbjct: 357 GKLWAELFDEF--VESKLIDPTFVTDFPI-EISPLARR--------------------SD 393

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR----FGGLYRAF 529
                A +++L   G EIA+G    +      + F     +K   +           RA 
Sbjct: 394 ENPEIAERFELFIAGREIANGFNELNDPLDQYERFKAQLEAKAKGDEEGMEMDEDYIRAL 453

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           Q GMPP  G   GIDR+VMLL  + ++++V LFP  +
Sbjct: 454 QYGMPPTAGEGIGIDRLVMLLTNSHSIKDVILFPTMK 490


>gi|219685338|ref|ZP_03540157.1| asparagine--tRNA ligase [Borrelia garinii Far04]
 gi|219673111|gb|EED30131.1| asparagine--tRNA ligase [Borrelia garinii Far04]
          Length = 485

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 63/374 (16%), Positives = 132/374 (35%), Gaps = 54/374 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +  + A      +    +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFTEKDLKKLTTGASIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTYSFNVIGETDSKTYPLQKKRHTFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------ 186
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKPN 185

Query: 187 -------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NSLGNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR-------------------- 276
           ++ EM+F + +D ++  E++L+ +     N  +   +FL                     
Sbjct: 246 IEPEMAFCKLNDNISLAEDLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFE 305

Query: 277 ---ICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK---ILSVNPGYEVWAIP 330
                   AI        D++    +   T+H  +    +F K   ++     ++ + + 
Sbjct: 306 VITYTKAIAILENSKKNFDIKPCWGIDLQTDHERYLTEEIFKKPVVVIDYPKNFKAFYMK 365

Query: 331 AKGGGGNRAFCDRM 344
                      D +
Sbjct: 366 INKDNKTVKGMDIL 379



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 379 LVPRIGEIIGGSEREDDLQKLENRIKELNLNI----EHLNWYLDLRRFGSTPHSGFGLGL 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V    G  N+R+   FP +  
Sbjct: 435 ERLVQYTTGISNIRDSIPFPRTPK 458


>gi|121609996|ref|YP_997803.1| lysyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|121554636|gb|ABM58785.1| lysyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 527

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 62/307 (20%), Positives = 121/307 (39%), Gaps = 35/307 (11%)

Query: 6   THSCGDLGVSD----------VGSFVRLSGWVHRVRPHGGIIFLDIRDHY-----GITQV 50
           +H    L ++               V ++G +   R  G   F  ++D       G  Q+
Sbjct: 59  SHQAAQLHLAHGAATAQALQAAAVSVGVAGRMMLKRVMGKASFATLQDGSLGATGGRIQL 118

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D+         +   +  I G      AE       T ++ +   ++ +L+ +   
Sbjct: 119 YVTSDAVGQARYADFKHWDLGDIVG------AEGTLMKTRTDELSIKVTRLRLLTKSLR- 171

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           PLP        +  +++ R++DL  D   +     R++ ++ +R  M+   F+E  TP+L
Sbjct: 172 PLPDKFHGLADQEQKYRQRYVDLITDAQARQRFVARSKAVSDLREFMVGHGFLEVETPML 231

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   AR F+      +   Y L  AP+ Y + L+  GF+R F+I   +R+E   S 
Sbjct: 232 HPIPGGANARPFVTHHNALEQQMY-LRIAPELYLKRLIVGGFERVFEINRSYRNEGI-SV 289

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICY 279
           R   EF  L+   ++    D+++  E ++R V  + +    +S           F R+  
Sbjct: 290 RHNPEFTTLEFYAAYWNYLDVMDFTETLIRAVALKATGSLQMSYQGRAVDLAQPFARLSI 349

Query: 280 DDAIRRY 286
            +AI ++
Sbjct: 350 REAIFQH 356



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 9/128 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           ++E   E+K        F M      S   + NDL      +++L   G E  +G    +
Sbjct: 397 YFEETVEDKLWQPT---FIMEHPTEISPLARANDLRPEVTERFELYITGREFGNGFSELN 453

Query: 500 MSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            ++     F     +K+  ++          RA + GMPP GG   GIDR++MLL  + +
Sbjct: 454 DAQEQAARFHTQVAAKDGGDDEAMFHDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSPS 513

Query: 556 VREVSLFP 563
           +R+V LFP
Sbjct: 514 IRDVILFP 521


>gi|255016153|ref|ZP_05288279.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 560

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 56/272 (20%), Positives = 113/272 (41%), Gaps = 10/272 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR++G +   R  G   F++++D  G  QV  + D  C +  K   +     +  +    
Sbjct: 39  VRIAGRIMSRRIMGKASFMELQDSEGRIQVYISRDDICPDENKDTYNVVFKKLLDIGDFV 98

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFLDLR 134
             +        G+I + AQ++ +LS +      V  +            +R++ R++DL 
Sbjct: 99  GIKGFVFRTQMGEISVHAQELTVLSKSLRPLPVVKYKDGVAYDGFNDPELRYRQRYVDLV 158

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            +  +    +KR  II +MR  +    + E  TPIL + +    AR F           Y
Sbjct: 159 VNEGVKDIFMKRAAIIKTMRTALDEAGYTEVETPILQSIAGGASARPFTTHHNSLDIDLY 218

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + +++ 
Sbjct: 219 -LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMELYVQYKDYNWMMSF 276

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            E +L  +    +  +  + +   I +    R
Sbjct: 277 TEKLLERICIAVNGTSESTIDGKTISFKAPFR 308



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 81/236 (34%), Gaps = 40/236 (16%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W  S  +  L  I   ++ +      G             I   +  + G D       +
Sbjct: 272 WMMSFTEKLLERICIAVNGTSESTIDGKTISFKAPFRRLPILEAIKEKTGYDLEGKSEDE 331

Query: 406 PLKFCSFAADARNHIAQELG---IINCNCFEFC--------WIMDFPFYEWNEEEKKIDF 454
               C    + +  I   +G   +I+    EFC        +I+D+P             
Sbjct: 332 IRTICK---ELKMEIDDTMGKGKLIDEIFGEFCEGTFIQPTFIIDYP------------V 376

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             +P T        L           +++L+ NG E+A+     +      + F      
Sbjct: 377 EMSPLTKMHRSKPGL---------TERFELMVNGKELANAYSELNDPIDQEERFKEQLRL 427

Query: 515 KEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            E  ++          RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP  +
Sbjct: 428 SEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLVMLMTGQTTIQEVLLFPQMR 483


>gi|170288919|ref|YP_001739157.1| lysyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|238688842|sp|B1LAX6|SYK_THESQ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|170176422|gb|ACB09474.1| lysyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 502

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 69/323 (21%), Positives = 129/323 (39%), Gaps = 23/323 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y     G++  S     +  +G V  +R HG   F  ++D  G  Q     DS   E 
Sbjct: 39  EKYDYLQAGEVLES---EKLSFAGRVMSIRHHGKTAFFHMKDDTGRIQAYVRADSVGKEK 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
               +    +                   TG++ +  Q+  +LS A   PLP        
Sbjct: 96  MDLFKRHVKIGD-----FIGVRGFPFKSKTGELTIYVQEYTLLSKALR-PLPEKWHGIKD 149

Query: 122 ESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
           + I ++ R+L+L   D   +   KR + +  +R  + +  FIE  TPIL   +    AR 
Sbjct: 150 KEIIYRQRYLELIVSDEAIERFRKRFKAVQVIREFLNSRGFIEVETPILHYVTGGAEARP 209

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+    V     Y L  AP+ Y + L+  GF++ ++I   FR+E       P EF  +++
Sbjct: 210 FVTHLNVFDIDMY-LRIAPELYLKRLIIGGFEKIYEIGKNFRNEGISYKHSP-EFTSIEI 267

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR----------YGTD 289
             ++ + +D+++  E ++  V +       +S     I +    +R           G D
Sbjct: 268 YQAYADYNDMMDLTEELIVEVVKRTCGTLKISYQGKEIDFTPPWKRVRMRDFLKEKLGVD 327

Query: 290 KPDLRNPIIMHNVTEHFVHSEFR 312
             +  + +++  + E+ V  E +
Sbjct: 328 ILEDPDEVLLKKLEEYGVELEIK 350



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 55/152 (36%), Gaps = 26/152 (17%)

Query: 417 RNHIAQEL-GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           R H+  +L  ++        +I+D P               +P          L      
Sbjct: 352 RAHLIDKLRDLVEEELVNPTFIIDHP------------VVISPLAKRHREDPRL------ 393

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQC 531
                +++L+  G EIA+     +      Q F      +E  +           RA + 
Sbjct: 394 ---TERFELIIFGREIANAFSELNDPVDQYQRFLEQAKMREEGDEEAHMMDLDFVRALEY 450

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP GG+  G+DR+ M +  +  +R+V  FP
Sbjct: 451 GMPPTGGLGIGLDRLFMFITDSPTIRDVIPFP 482


>gi|70991613|ref|XP_750655.1| lysyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66848288|gb|EAL88617.1| lysyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|159124215|gb|EDP49333.1| lysyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 605

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 61/294 (20%), Positives = 124/294 (42%), Gaps = 19/294 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV-----VANPDSACFEIAKSVR 66
           G       VR++G ++  R  G  + F DIR      QV      A+ D +     + +R
Sbjct: 117 GEQKPDVTVRIAGRIYTKRSSGSKLFFYDIRAEGVKVQVVCQAQNASGDVSFEAQHEHLR 176

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ + G        T   N   G++ + A ++ +L+      +P        +  RF
Sbjct: 177 RGDIVGVVGF----PGRTSPKNRADGELSIFATEVVLLAPCL-HAIPSEHYGFQDKEQRF 231

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL  +   +N  V R++I+  +R    + +FIE  TP++ A +    A+ F+   
Sbjct: 232 RQRYLDLIMNERSRNVFVTRSKIVRYVRNFFDSRDFIEVETPMMNAIAGGATAKPFITHH 291

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                + + +  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ 
Sbjct: 292 NDLDMNLF-MRVAPELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYA 349

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +  D++N  E ++ G+ +  + G   + +         +       P  R  +I
Sbjct: 350 DVYDVMNLTEELISGLVKHVTGGYETTFH----TQSGEVYNVNWKAPWRRVEMI 399



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 4/96 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
           +    +++      EI +     +        F      K+  ++           + + 
Sbjct: 482 AGLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQARQKDQGDDEAQLIDENFCTSLEY 541

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 542 GLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 577


>gi|312880305|ref|ZP_07740105.1| lysyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783596|gb|EFQ23994.1| lysyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 503

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 74/382 (19%), Positives = 143/382 (37%), Gaps = 33/382 (8%)

Query: 5   RTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           R H+ G +  +  G          +  +G V  +R HG   F  + D +   Q+    D 
Sbjct: 43  RKHTLGYVRSAFEGLQADEGGEETIVTAGRVMTLRRHGKAAFATLEDEHHRLQMYFQFDE 102

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +     +        G ++  +          G++ L   +  +LS A   PLP   
Sbjct: 103 LGEKAYTFFKKW---VDTGDLLGVAGRPF--RTQRGELSLKVSQFTLLSKALR-PLPEKW 156

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                + +R++ R++DL     +     KRTRII + R  + A + +E  TPIL+  +  
Sbjct: 157 HGLKDQEVRYRQRYVDLIANPEVRDTFRKRTRIIQTFRRVLEAHDTLEVGTPILSPLAGG 216

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                 V      G    L  A + Y + L+   F R ++I P FR+E       P EF 
Sbjct: 217 ANARPFVTFHNALGIPMYLRIATELYLKRLIVGMFGRVYEIGPNFRNEGIDLKHNP-EFT 275

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            +++  S+   +D+++  E +L    +E     TV+     I ++   RR          
Sbjct: 276 AMEVYWSYANYEDMMDLCEEILVACADEV-GSRTVTYQGTEISFEPPFRR---------- 324

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
              M ++ +     +F   S   + +   +   +    G   +     + E+  +  +  
Sbjct: 325 -ASMMDLVKEHTGIDFDALSDQEARDLALKNKVVSELKGYETKYHL--LPEFFDAYVEDK 381

Query: 356 LAYIFWRLDESGNVAGMGPVAK 377
           L    + +   G+   + P++K
Sbjct: 382 LIQPTFVM---GHPTVISPLSK 400



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 8/117 (6%)

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
              +P  +      +    D       +++L  NG E+A+     +      + F +   
Sbjct: 388 VMGHPTVISPLSKRNAANPD----ITDRFELFINGSEVANAFSELNDPLDQRERFLDQVK 443

Query: 514 SKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            KE  +            A + G+PP GG+  GIDR+VMLL  ++++R+V LFP  +
Sbjct: 444 QKEAGDEEAHVFDEDFVNALEYGLPPTGGMGIGIDRLVMLLTDSRSIRDVILFPTMR 500


>gi|270261214|ref|ZP_06189487.1| asparaginyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270044698|gb|EFA17789.1| asparaginyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 466

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 100/280 (35%), Gaps = 22/280 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G + V S V + GWV   R    GI FL + D      + A  +++       V    + 
Sbjct: 12  GRAAVDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPLQAVVNNSLPNYQDEV----LH 67

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  + + + +       EL    I+++   ++        + +      +   L
Sbjct: 68  LTTGCSIEVTGKVVASPGEGQSFELQTTAIKVVGWVDDPDTYPMAAKRHSIEYLREVAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R + +      R  +  ++        F   STP++TAS  EGA +    S ++    
Sbjct: 128 RPRTNLIGAVARVRHTLAQAIHRFYHENGFFWVSTPLITASDTEGAGEMFRVSTLDLENL 187

Query: 190 ------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRTDKGAVDFSQDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           + ++ E++F + +DI    E +L+ VF+   N       F
Sbjct: 248 WMIEPEVAFADLEDIAELAEKMLKYVFQAVLNERMDDMQF 287



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 44/120 (36%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    +V+ Q 
Sbjct: 347 EKHFKAPVVVKNYPKDIKAFYMRMNDDGKTVAAMDVLAPGIGEIIGGAQREERLDVLDQR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              +G++K      +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 407 LDAMGLNK----EDYWWYRDLRRYGTVPHAGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|317061684|ref|ZP_07926169.1| asparaginyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313687360|gb|EFS24195.1| asparaginyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 461

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 128/376 (34%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
             + +   V+L  WV ++R      FL+I D       QVV +     F+    +     
Sbjct: 11  KETYMDKKVKLGAWVRKIRSQKNFGFLEINDGSFFNGIQVVFDSSLENFDEISRLSIASS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G ++              + E+ A KIEI   A+ L  P+  +R   E +R K   
Sbjct: 71  VIVEGTLVKSEGAG-------QEFEVKASKIEICQKAD-LDYPLQNKRHSFEFLRTKS-H 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +T       R+    ++      +NF+   TPI+T S  EGA +    + ++   
Sbjct: 122 LRPRTNTFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITGSDAEGAGEMFRITTLDLND 181

Query: 191 FYAL-----------------PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                                     Q       + F   +   P FR E   + R   E
Sbjct: 182 LPKKEDGTVNFQKDFFGKSTNLTVSGQLNGETYCAAFRNIYTFGPTFRAEYSNTARHASE 241

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ EM+F + D  ++  E +++ +     +      NF                   
Sbjct: 242 FWMIEPEMAFADLDVNMDIAEKMVKYIIRYVMDTCPEEMNFFNQFIEKGLFDKLNNVLNN 301

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+   +   +EH  +     F K + +    +     
Sbjct: 302 DFGRLSYTEAIDILKKSGKKFEYPVEWGIDLQSEHERYLAEEYFKKPVFLVDYPKDI--- 358

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  ++NE
Sbjct: 359 -------KAFYMKLNE 367



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  +++D+P        K I      F M           D  +++A   DL+     EI
Sbjct: 347 KPVFLVDYP--------KDIKA----FYMK-------LNEDGKTVRAM--DLLAPQIGEI 385

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    E++ Q  S +G++K      +       + G  PH G   G +R++M L 
Sbjct: 386 IGGSQREDNLEILEQRISELGMNK----EDYSFYLDLRKYGSFPHSGYGLGFERMIMYLT 441

Query: 552 GAKNVREVSLFPMSQN 567
           G  N+R+V  FP + N
Sbjct: 442 GMANIRDVIPFPRTPN 457


>gi|313114650|ref|ZP_07800156.1| asparaginyl-tRNA synthetase [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310623014|gb|EFQ06463.1| asparaginyl-tRNA synthetase [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 462

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 64/348 (18%), Positives = 118/348 (33%), Gaps = 49/348 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ + + GW   +R    I F+ + D      +    +      A  + +   +   GL 
Sbjct: 17  GTEITVCGWAKNIRDSKNIGFIALSDGGCFKTLQVVLE------AGKLANYDEVIHTGLY 70

Query: 78  --MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +    + +         EL+A  +EIL        P+  ++   E +R     L  R 
Sbjct: 71  SSLRVKGKLVLTPQAKQPFELNADSVEILGDCPADEYPLQKKKMSMEYLR-TMPTLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           +T +     R+    ++        F+   +P+LT+S  EGA +    + ++        
Sbjct: 130 NTFNAAFRVRSAAAYAIHKFFQENGFVYSHSPLLTSSDCEGAGEMFRVTTLDLENVPKNE 189

Query: 190 --------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+  P       Q +   MA  F + +   P FR E   + R   EF+ ++
Sbjct: 190 DGTVDYTQDFFEKPVNLTVSGQLEAEAMAMAFGKVYTFGPTFRAEKSFTTRHAAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            EM+F +    ++T E + + V     +       F                      RI
Sbjct: 250 PEMAFCDLSGYMDTAEAMTKYVIRYVLDNCPDEMAFFNQFIDKGLIERLELVANCEFGRI 309

Query: 278 CYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
            Y +AI     +    + P+       TEH  +    VF K + V   
Sbjct: 310 SYTEAIEILKKNNKKFQFPVEWGVDIQTEHERYLTEVVFKKPVFVTDY 357



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 52/137 (37%), Gaps = 26/137 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P     +E K      NP              D  ++ A   D++  G  E+
Sbjct: 350 KPVFVTDYP-----KEIKSFYMKQNP--------------DGKTVAAA--DMLVPGIGEL 388

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    + ++     +G+ K      +       + G   H G   G +R++M L 
Sbjct: 389 IGGSQREENYDKLVARMDELGMDKT----NYDWYLNLRKFGGVEHAGYGLGFERMIMYLT 444

Query: 552 GAKNVREVSLFPMSQNF 568
           G +N+R+V  FP +   
Sbjct: 445 GIQNIRDVLPFPRTAYG 461


>gi|317479626|ref|ZP_07938751.1| lysyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|316904191|gb|EFV26020.1| lysyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 581

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 56/291 (19%), Positives = 117/291 (40%), Gaps = 10/291 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +         V ++G +   R  G   F++++D  G  QV    D  C + 
Sbjct: 41  NAFSTDIKAEFNDDAEPRQVSVAGRIMSRRIMGKASFIELQDSKGRIQVYITRDDICPDE 100

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + A+K+ +L+ + +    V  +    
Sbjct: 101 DKEMYNTVFKRLLDLGDFIGIEGFVFRTQMGEISIHAKKLTVLAKSIKPLPIVKYKDGVA 160

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R++DL  +  + +  +KR  +I +MR  +    + E  TPIL +   
Sbjct: 161 YDSFEDPELRYRQRYVDLIVNDGVKEKFLKRATVIKTMRAVLDEAGYTEVETPILQSIPG 220

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+  GF+  ++I   FR+E    +  P E
Sbjct: 221 GASARPFITHHNSLDMDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-E 278

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           F  +++ + + + + +++  E +L  +    +       +   I +    R
Sbjct: 279 FTCMELYVQYKDYNWMMSFTEKLLERICIAVNGCTETEIDGKTISFKAPYR 329



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 86/259 (33%), Gaps = 45/259 (17%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W  S  +  L  I   ++        G             I   +  + G D       +
Sbjct: 293 WMMSFTEKLLERICIAVNGCTETEIDGKTISFKAPYRRLPILEAIKEKTGYDLEGKSEDE 352

Query: 406 PLKFCSFAADARNHIAQELG---IINCNCFEFC--------WIMDFPFYEWNEEEKKIDF 454
             + C         I   +G   +I+    EFC        +I D+P             
Sbjct: 353 IRQVCKELN---MEIDDTMGKGKLIDEIFGEFCEGTFIQPTFITDYP------------V 397

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             +P T        L           +++L+ NG E+A+     +      + F +    
Sbjct: 398 EMSPLTKMHRSKPGL---------TERFELMVNGKELANAYSELNDPIDQEERFKDQLRL 448

Query: 515 KEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            E  ++          +A Q GMPP  GI  GIDR+ ML+ G   ++EV  FP  +    
Sbjct: 449 SEKGDDEAMFIDQDFLKALQYGMPPTSGIGIGIDRLTMLMTGESFIQEVLFFPQMRPEKV 508

Query: 571 LLMGSPSTVSVEQLRELGL 589
           +   +P+  +     ELG+
Sbjct: 509 IPKDAPARYT-----ELGI 522


>gi|308049454|ref|YP_003913020.1| asparaginyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307631644|gb|ADN75946.1| asparaginyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 466

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 68/396 (17%), Positives = 122/396 (30%), Gaps = 52/396 (13%)

Query: 8   SCGDLGVSD--VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           +  D+   D  VGS V + GW+   R    GI FL + D      +     +        
Sbjct: 5   TIADVLKGDHAVGSEVTVRGWIRTRRDSKAGISFLAVYDGSCFDPIQGVAPNNLPNYENE 64

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +    +    G  +  + E + +     Q E+    ++++   E+        + +    
Sbjct: 65  I----LRLTAGCSVEMTGEVVESPGQGQQFEMKVTNVKVVGWVEDPDTYPMAAKRHSIEY 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
             +   L  R +     +  R  +  ++      + FI  STPILTAS  EGA +    S
Sbjct: 121 LREVAHLRPRTNITGAVMRVRNCLSQAIHRFYHEQGFIWVSTPILTASDCEGAGEMFRVS 180

Query: 185 RVNQGSFYAL-----------------PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            ++  +   L                      Q      A    + +   P FR E+  +
Sbjct: 181 TLDMNNLPRLENGEVDYDQDFFGKETFLTVSGQLNAETYACAMSKVYTFGPTFRAENSNT 240

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------ 275
            R   EF+ ++ E++F + +D     E +L+  F    +       F             
Sbjct: 241 SRHLAEFWMVEPEVAFADLEDNAKLAEAMLKYCFRAVLDERMDDLQFFEQRVNKEVITRL 300

Query: 276 ---------RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGY 324
                    ++ Y DAI            P+   +   +EH        F   + V    
Sbjct: 301 KSFVEADFAQVDYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHFKAPVVVKNYP 360

Query: 325 EVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +            R   D     A     PG+  I 
Sbjct: 361 KDI-----KAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +++ Q    +G+ KE +           +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDILDQRMEEMGLPKEEM----YWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+V  + G  N+R+V  FP S  
Sbjct: 426 YGTIPHAGFGLGFERLVSYVTGVTNIRDVIPFPRSPR 462


>gi|253681525|ref|ZP_04862322.1| asparagine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561237|gb|EES90689.1| asparagine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 463

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 131/385 (34%), Gaps = 56/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V++SGWV  +R      F+++ D       QVV   +   F+          + ++G
Sbjct: 18  GKEVKISGWVRTLRASNKFGFIEVNDGSFFKNIQVVFGAELENFKEISKYAISSSISVEG 77

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V+                E+ A+K+ +   ++    P+  +R   E +R     L  R 
Sbjct: 78  EVVITEG-------AKQPFEIHAKKVVLEGKSDADY-PLQKKRHTFEYLR-SIAHLRPRS 128

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +        R+    ++      + F+   TPI+T S  EGA +    + ++  +     
Sbjct: 129 NAFSAVFRVRSLAAYAIHKFFQDQGFVYVHTPIITGSDCEGAGEMFRVTTLDMDNLPKDE 188

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           Q    YK+                  + A  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 QGNIDYKEDFFGKQSNLTVSGQLEAEIYALAFRNVYTFGPTFRAENSNTARHASEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSNNFLRI 277
            EM+F E  D ++  E +++ +                            N V+++F RI
Sbjct: 249 PEMAFAELKDYMDVAEEMVKYIINYVRENAPEEMEFFNKFIDKGLLERLDNVVNSDFARI 308

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y +A+            P+   +   TEH  +    ++ K     P +           
Sbjct: 309 SYTEAVEMLQKSGAQFEYPVEWGIDLQTEHERYLTEEIYKK-----PVFVTDYPKDIKAF 363

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 364 YMRMNDDNKTVAAADLLVPGIGEII 388



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 51/145 (35%), Gaps = 24/145 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +  ++ D+P        K I      F M          ND     A  
Sbjct: 338 HERYLTEEIYKKPVFVTDYP--------KDIKA----FYMRM--------NDDNKTVAAA 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    +++    + +G++K      +       + G   H G   
Sbjct: 378 DLLVPGIGEIIGGSQREERLDLLEARMAELGLNK----EDYWWYLELRKYGETKHAGYGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           G +R++M L G  N+R+V  FP + 
Sbjct: 434 GFERMIMYLTGMSNIRDVLPFPRTP 458


>gi|312886772|ref|ZP_07746379.1| lysyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311300874|gb|EFQ77936.1| lysyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 579

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 53/285 (18%), Positives = 111/285 (38%), Gaps = 9/285 (3%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F +++D  G  Q+    D  C +  K++ +     +  L  
Sbjct: 53  QEVVIAGRIMSRRIMGSASFAELQDSTGRVQIYIKRDDICPDEDKTMYNTVFKKLLDLGD 112

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKYRFL 131
               +       TG+  +  +++ ILS + +    V  E +           +R++ R++
Sbjct: 113 FVGVKGYVFTTQTGETSVHVKELTILSKSLKPLPVVRREEDGTVHDAFTDPEMRYRQRYV 172

Query: 132 DL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL       +  + R+++I++MR    +E ++E  TPIL +     A             
Sbjct: 173 DLTVNPEFKQIFMNRSKVISTMRSYFDSEGWMEVETPILQSVHGGAAARPFKTYHNTLDM 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  A + Y + L+ +GFD  ++    FR+E       P EF  +++ +++ +   ++
Sbjct: 233 PLFLRIANELYLKRLIVAGFDGVYEFGKMFRNEGMDRTHNP-EFTSVEIYVAYKDYIWMM 291

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
             +E+ L  V         V      I +     +       L+ 
Sbjct: 292 AMVEHCLEKVAMAVHGKAVVKVGEHEINFAGPYEKLSMYDSILKY 336



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 66/205 (32%), Gaps = 36/205 (17%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI--AQELG 425
            ++    + K+  I  +      L     D    +     K         + I  A+   
Sbjct: 326 KLSMYDSILKYTGIDVSAMDEAALRQTCRDLAIEVDKTMGK-----GKLVDEIFSAK--- 377

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
            +  +  +  +I D+P      E   +   H                        +++L 
Sbjct: 378 -VEEHLIQPTYITDYPI-----EMTPLAKKHR----------------SKEGLVERFELF 415

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAA 541
             G EIA+     +      + F +  +     +           RA + GMPP  G+  
Sbjct: 416 VMGKEIANAYTELNDPIDQRERFEDQLLLAGRGDEEAMAMDDDFLRALEYGMPPTSGLGI 475

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           GIDR+VML+     ++EV  FP  +
Sbjct: 476 GIDRLVMLMTNQTTIQEVLFFPQMR 500


>gi|67522913|ref|XP_659517.1| hypothetical protein AN1913.2 [Aspergillus nidulans FGSC A4]
 gi|40745922|gb|EAA65078.1| hypothetical protein AN1913.2 [Aspergillus nidulans FGSC A4]
 gi|259487270|tpe|CBF85812.1| TPA: lysyl-tRNA synthetase, hypothetical (Eurofung) [Aspergillus
           nidulans FGSC A4]
          Length = 606

 Score =  184 bits (468), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 121/269 (44%), Gaps = 15/269 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC-----FEIAKSVR 66
           G     + VR++G ++  R  G  +IF DIR      QVV    +A       +  + +R
Sbjct: 119 GEQKPDTTVRIAGRIYTKRSSGAKLIFYDIRAEGVKVQVVCQAQNASGAVSFEDQHEHLR 178

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ I G        +   N   G++ + A ++ +L+      +P        +  R+
Sbjct: 179 RGDIVGIVGF----PGRSNPKNRPDGELSIFATEVVLLAPCL-HAIPSEHYGFQDKEQRY 233

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL  +   +N  + R++++  +R      +F+E  TP++ A +    A+ F+   
Sbjct: 234 RQRYLDLIMNDKSRNVFITRSKMVTYIRNFFDQRDFVEVETPMMNAIAGGATAKPFITHH 293

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             +  + + +  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ 
Sbjct: 294 NEHDMNLF-MRVAPELYLKMLIVGGLERVYELGRQFRNEGVDLTHNP-EFTTCEFYWAYA 351

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +  D++N  E ++ G+ +  + G   + +
Sbjct: 352 DVYDVMNLTEELVSGLVKHITGGYETTFH 380



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 4/92 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
           +    +++      EI +     +        F      K+  ++           + + 
Sbjct: 484 AGLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQARQKDQGDDEAQIIDENFCTSLEY 543

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP GG   GIDR+VM L    +++EV  FP
Sbjct: 544 GLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFP 575


>gi|14590172|ref|NP_142237.1| asparaginyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|20139874|sp|O57980|SYN_PYRHO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|109156926|pdb|1X54|A Chain A, Crystal Structure Of Asparaginyl-Trna Synthetase From
           Pyrococcus Horikoshii Complexed With
           Asparaginyl-Adenylate
 gi|109156927|pdb|1X55|A Chain A, Crystal Structure Of Asparaginyl-Trna Synthetase From
           Pyrococcus Horikoshii Complexed With
           Asparaginyl-Adenylate Analogue
 gi|109156928|pdb|1X56|A Chain A, Crystal Structure Of Asparaginyl-Trna Synthetase From
           Pyrococcus Horikoshii
 gi|3256630|dbj|BAA29313.1| 434aa long hypothetical asparaginyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 434

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 77/355 (21%), Positives = 142/355 (40%), Gaps = 29/355 (8%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKS 64
            C ++     G  VRL+GWV+     G  IFL IRD  GI Q V   +      FE AK 
Sbjct: 6   YCQEVKPELDGKKVRLAGWVYTNMRVGKKIFLWIRDSTGIVQAVVAKNVVGEETFEKAKK 65

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E  + ++G+V +            G  E+  +K+E++    E P+P   E+  PE +
Sbjct: 66  LGRESSVIVEGIVKADER-------APGGAEVHVEKLEVIQAVSEFPIPENPEQASPE-L 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              YR L +R       +  +  +I + R  ++ + + E   PIL   + EG        
Sbjct: 118 LLDYRHLHIRTPKASAIMKVKETLIMAAREWLLKDGWHEVFPPILVTGAVEGGATLFKLK 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             ++  +  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E +++
Sbjct: 178 YFDK--YAYLSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWM 234

Query: 245 EQDDILNTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTD 289
           +  DI+   E ++  + +               + +        F RI YD+AI    + 
Sbjct: 235 DLWDIMKVEEELVSYMVQRTLELRKKEIEMFRDDLTTLKNTEPPFPRISYDEAIDILQSK 294

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
             ++     +    E  +  EF     +       + + +        +     M
Sbjct: 295 GVNVEWGDDLGADEERVLTEEFDRPFFVYGYPKHIKAFYMKEDPNDPRKVLASDM 349



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 51/151 (33%), Gaps = 21/151 (13%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
                +LG          +  D PF+ +             F M +        ND   +
Sbjct: 298 VEWGDDLGADEERVLTEEF--DRPFFVY-----GYPKHIKAFYMKED------PNDPRKV 344

Query: 478 KAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
            A   D++      EI  G  R    + +L      G+  +  E          + G  P
Sbjct: 345 LAS--DMLAPEGYGEIIGGSQREDDYDKLLNRILEEGMDPKDYE----WYLDLRRYGSVP 398

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           H G   G++R+V  +L   ++R  +LFP + 
Sbjct: 399 HSGFGLGVERLVAWVLKLDHIRWAALFPRTP 429


>gi|226330674|ref|ZP_03806192.1| hypothetical protein PROPEN_04594 [Proteus penneri ATCC 35198]
 gi|225201469|gb|EEG83823.1| hypothetical protein PROPEN_04594 [Proteus penneri ATCC 35198]
          Length = 466

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 71/406 (17%), Positives = 136/406 (33%), Gaps = 53/406 (13%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VG  V + GWV   R    GI FL + D      V A  ++        V    +    G
Sbjct: 16  VGEDVTVRGWVRTRRDSKAGISFLTVYDGSCFNPVQAIINNNLPNYQDEV----LHLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A ++ ++ + ++        + +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPGQGQNFEIHATQVVVVGMVDDPETYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           + +      R  +  ++      + F   STP++TA+  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITAADTEGAGEMFRVSTLDMNNLPRTD 191

Query: 190 --------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      AS   + +   P FR E+  + R   EF+ ++
Sbjct: 192 KGDVDFSEDFFGREAFLTVSGQLNGETYASALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + +DI    E +L+  F                           N ++++F +I
Sbjct: 252 PEVAFADLNDIAALAEKMLKYTFAAVLAERKDDMEFFAQRVDKDAITRLENFITSDFAQI 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +   + F   + V    +          
Sbjct: 312 DYTDAVTVLENCGEKFENPVYWGVDLSSEHERYLAEKHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNI 381
             R   D     A     PG+  I   +  S     +    K L+ 
Sbjct: 367 YMRMNEDGKTVAAMDVLAPGIGEI---IGGSQREERLDMFDKRLDE 409



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 43/123 (34%), Gaps = 5/123 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    ++  + 
Sbjct: 347 EKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDMFDKR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              +G+SK      +       + G  PH G   G +R+V  + G  NVREV  FP +  
Sbjct: 407 LDEMGMSK----EDYWWYRDLRRYGTVPHSGFGLGFERLVAYVTGVANVREVIPFPRTPR 462

Query: 568 FCD 570
             D
Sbjct: 463 NAD 465


>gi|227432626|ref|ZP_03914602.1| lysyl-tRNA synthetase (class II) [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351596|gb|EEJ41846.1| lysyl-tRNA synthetase (class II) [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 495

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 79/356 (22%), Positives = 136/356 (38%), Gaps = 33/356 (9%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT    +L           + +    V ++G +   R  G +IF D RD  G  QV A  
Sbjct: 36  RTAKAQELHNLYDASSLEELENAKHEVVIAGRMVAKRGAGKVIFADFRDVSGKIQVYARR 95

Query: 55  DS--ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           D     + I K       L I G++M   A         G++ + A+++  LS A   P+
Sbjct: 96  DDLANNYPIIKRADLGDFLGIKGIMMKTEA---------GELTVLAKELTHLSKALR-PM 145

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-T 170
           P           R++ R+LDL  +       + R+ II+++R  M   +F+E  TPIL T
Sbjct: 146 PDKFHGISDVETRYRKRYLDLIANEDSFKKFQERSHIISAIRAYMDRNDFLEVETPILQT 205

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +    AR F+          Y +  A + Y + L+  G +R ++I   FR+E       
Sbjct: 206 EAGGAAARPFITHHNALNIDMY-MRIATELYLKRLVVGGMERVYEIGRIFRNEGMDPKHN 264

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  ++   ++++  D+++  E + +      S+        L+I Y       GT  
Sbjct: 265 P-EFTTMESYAAYMDFTDVMDETEGIFKAAASVVSDD-------LKITYQGTEIDLGTKF 316

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                  ++   T      E  V       +  +  +      G    AF +   E
Sbjct: 317 ARKHLVDLIKEQTGIDFWQEMSVEEAQKLADDNHVKYEKYWGVGHIINAFFEEFVE 372



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   E+  +          +    + K  D       +++L   G E A+     +  
Sbjct: 366 FFEEFVEDTLVQPTFVYGHPVEVSPLAKKNTD-DPRFTDRFELFIMGSEYANAFTELNDP 424

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F      +E   +   G       A + GMPP GG+  GIDR+VMLL  +  +R
Sbjct: 425 IDQRARFEAQAAERENGNDEAEGIDEDFIEALEYGMPPTGGLGVGIDRLVMLLTDSDTIR 484

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 485 DVVLFPTMR 493


>gi|150025270|ref|YP_001296096.1| lysyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149771811|emb|CAL43285.1| Lysine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 563

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 57/298 (19%), Positives = 115/298 (38%), Gaps = 10/298 (3%)

Query: 7   HSCGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           H+   +  S + G  V L+G +  VR  G   F +++D  G  Q+  N D  C    K++
Sbjct: 34  HTSKQVKESFEEGKKVTLAGRLMSVRDQGKASFAELQDSQGRVQLYFNRDVICEGDDKTL 93

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------ 119
            ++    +  L      E        G   +       LS           + E      
Sbjct: 94  YNQVFKKLTDLGDFIGVEGELFTTQVGAKCIRVSNFTFLSKTLRPLPLPKTDEEGNIHDA 153

Query: 120 -YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                +R++ R++DL  +   K   VKRT++  +MR       ++E  TP+L + +   A
Sbjct: 154 FNDPELRYRMRYVDLVVNPQVKEVFVKRTKLFTAMRNFFNESGYMEVETPVLQSIAGGAA 213

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
               +    +      +  A + Y + L+  GFD  ++ +  FR+E       P EF  +
Sbjct: 214 ARPFITHHNSLDMPLYMRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAM 272

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           ++ +++ + + ++   EN+L       +  + V+    +I +     R    +  +  
Sbjct: 273 EIYVAYKDYNWMMTFAENLLDHCATAVNGSSEVTFGEHKISFKAPYARVTMTQAIIDF 330



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 5/123 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 373 EGNYIQPTFITDYPKEMSPLCKSHRDNPDLTERFELMVCGKEIANAYSELNDPIDQRERF 432

Query: 509 SNVGISKEVVENRFGG-----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +     E  ++   G       RA + GMPP  G+  G+DR++M L    +++EV  FP
Sbjct: 433 EHQLKLSEKGDDEANGVIDEDFLRALEYGMPPTSGMGIGMDRLIMFLTNNASIQEVLFFP 492

Query: 564 MSQ 566
             +
Sbjct: 493 QMR 495


>gi|281425342|ref|ZP_06256255.1| asparagine--tRNA ligase [Prevotella oris F0302]
 gi|281400505|gb|EFB31336.1| asparagine--tRNA ligase [Prevotella oris F0302]
          Length = 463

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 57/290 (19%), Positives = 118/290 (40%), Gaps = 26/290 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE 60
             R      L  ++ G  + + GWV   R    + F+ + D   I   Q+V +P S   E
Sbjct: 1   MKRIKVIDALQCTEYGKDINVKGWVRSHRSSKAVDFIALNDGSTINNIQIVVDPASMDAE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K++ +   + + G ++               +E+ +++IEI  +      P+  + + 
Sbjct: 61  TLKNITTGACISVVGQLVKSQGAGQT-------VEIQSKEIEIYGLC-PSDYPMQKKGQS 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KY  L LR +T       R  +  ++        F    TP++TAS  EGA + 
Sbjct: 113 FEYMR-KYAHLRLRTNTFGAVFRIRHNMAIAVHKYFHDHGFYYFHTPLITASDAEGAGEM 171

Query: 181 LVPSRVN------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDP 225
              + ++            +  F+    +     Q +  L A+     +   P FR E+ 
Sbjct: 172 FQVTTLDLARTGKDGEVPYERDFFGKKTSLTVSGQLEGELGATALGAIYTFGPTFRAENS 231

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + R   EF+ ++ E++F+++D++++  E+ ++   +   +       FL
Sbjct: 232 NTPRHLAEFWMIEPEVAFLDKDELMDLEEDFIKYCVQWALDNCKDDLEFL 281



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 14/121 (11%)

Query: 451 KIDFAHNPFTMPQ-GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                   F M +    ++++G D+         L     EI  G +R    + ++    
Sbjct: 355 DYPSEIKAFYMKKNPDGKTMQGTDV---------LFPRIGEIIGGSVREESYDKLVNEIK 405

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G+ K    + +       + G  PH G   G +R+++ + G +N+R+V  FP +    
Sbjct: 406 ARGMEK----DCYSWYLDTRKYGSCPHAGFGLGFERLILFVTGMQNIRDVIPFPRTPKSA 461

Query: 570 D 570
           +
Sbjct: 462 E 462


>gi|332880622|ref|ZP_08448296.1| lysine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332681610|gb|EGJ54533.1| lysine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 597

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 114/280 (40%), Gaps = 10/280 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             ++    V ++G +   R  G   FL+++D  G  QV    D  C    K + +     
Sbjct: 48  DAAEEKRQVCIAGRIMSRRIMGKASFLELQDSKGRIQVYVTRDDICPGENKDLYNTVFKK 107

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------YPESIRF 126
           +  L      +       TG+I +  Q++ +L+ + +    V  +            +R+
Sbjct: 108 LLDLGDFVGVKGFVFKTQTGEISVHTQELTVLAKSLKPLPIVKMKDGEVYDSFDDPELRY 167

Query: 127 KYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  ++ + +  +KR+ I+ ++R  +    + E  TPIL +      AR F+   
Sbjct: 168 RQRYVDLIVNSGVKETFLKRSAILKTLRAALDEAGYTEVETPILQSIPGGASARPFITHH 227

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + 
Sbjct: 228 NSLDIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKSHNP-EFTCMELYVQYK 285

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           + + ++   E +L  +    +       +   I +    R
Sbjct: 286 DYNWMMAFTEKLLERICIAVNGSTESVVDGKTISFKAPYR 325



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 73/228 (32%), Gaps = 24/228 (10%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W  +  +  L  I   ++ S      G             I   +  + G D       +
Sbjct: 289 WMMAFTEKLLERICIAVNGSTESVVDGKTISFKAPYRRLPILEAIKEKTGYDLNGKSEEE 348

Query: 406 PLKFCSFAADARNHIAQELG---IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
             + C         I   +G   +I+    EFC             E            P
Sbjct: 349 IREICKALN---LEIDDTMGKGKLIDEIFGEFC-------------EGTYIQPTFITDYP 392

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
                  K +        +++L+ NG E+A+     +      + F       E  ++  
Sbjct: 393 VEMSPLTKKHRSNPALTERFELMVNGKELANAYSELNDPIDQEERFIEQMRLSEKGDDEA 452

Query: 523 GG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                   RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP  +
Sbjct: 453 MFIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFPQMR 500


>gi|240102785|ref|YP_002959094.1| asparaginyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|259511571|sp|C5A4R8|SYN_THEGJ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|239910339|gb|ACS33230.1| Asparaginyl-tRNA synthetase (asnS) [Thermococcus gammatolerans EJ3]
          Length = 430

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 71/340 (20%), Positives = 140/340 (41%), Gaps = 31/340 (9%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSV 65
            C D+     G  V+L+GWV+R R  G  +F+ +RD  GI QVV + +     +  AK +
Sbjct: 6   YCADVKPEMEGKRVKLAGWVYRKREVGKKVFIVLRDSSGIVQVVFSKELNEEAYREAKKL 65

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + I+G V +           TG  E+ A K++++   +  P+     ++      
Sbjct: 66  GIESSVIIEGTVKADP------RAPTGA-EVQADKLQVIQNVDFFPIT----KDASPEFL 114

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR   +   +  +  ++ + R  ++ + + E   PIL   + EG         
Sbjct: 115 LDVRHLHLRSPKVASIMKVKGTLMQAAREWLLQDGWYEVFPPILVTGAVEGGSTLFKLKY 174

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ ++  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E ++++
Sbjct: 175 FDKTAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD 231

Query: 246 QDDILNTMENVLRGVF---------------EEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
             DI+   E ++  +                ++ +        F RI YD+AI    +  
Sbjct: 232 LWDIMKVEEELVSYMVQRTLELRRSEIETFRKDLTTLKNAVPPFPRISYDEAIDILQSKG 291

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
            ++     M    E  +  EF     +       + + + 
Sbjct: 292 VEIEWGEDMGADEERVLTEEFEAPFFVYGYPKHIKAFYMK 331



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 21/156 (13%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
                  +++G          +  + PF+ +             F M +         D 
Sbjct: 291 GVEIEWGEDMGADEERVLTEEF--EAPFFVY-----GYPKHIKAFYMKED------PEDP 337

Query: 475 LSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
             + A   D++      EI  G  R    + ++Q     G+  +  E          + G
Sbjct: 338 RKVLAA--DMLAPEGYGEIIGGSQREDNYDKLIQRILEEGMDPKDYE----WYLDLRKYG 391

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             PH G   G++R+V  +L   +VR  +LFP + + 
Sbjct: 392 SVPHSGFGLGLERLVAWVLKLDHVRWATLFPRTPSR 427


>gi|149277988|ref|ZP_01884127.1| lysine--tRNA ligase [Pedobacter sp. BAL39]
 gi|149231186|gb|EDM36566.1| lysine--tRNA ligase [Pedobacter sp. BAL39]
          Length = 592

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 60/338 (17%), Positives = 124/338 (36%), Gaps = 29/338 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             + ++G +   R  G   F++++D  G  QV    D  C +  K++ +     +  L  
Sbjct: 72  KNISIAGRIMSRRIMGSASFVELQDSTGRIQVYLKRDDLCPDEDKTLYNTVFKKLMDLGD 131

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKYRFL 131
                       TG+I L   ++++LS + +    V  + E           +R++ R++
Sbjct: 132 FIGVRGYVFTTQTGEISLHVSELKLLSKSLKPLPIVKRDEEGKIYDGFTDPELRYRQRYV 191

Query: 132 DL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL       +  + R+R+I++MR     + ++E  TPIL        AR F         
Sbjct: 192 DLTVNPDFKQIFINRSRVISTMRNYFDEQGWMEVETPILQPIHGGAAARPFATHHNTLDM 251

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A + Y + L+ +GFD  ++    FR+E       P E+  +++ +++ +   +
Sbjct: 252 PLY-LRIANELYLKRLIVAGFDGVYEFGKMFRNEGMDRTHNP-EYTGMEIYVAYKDYIWM 309

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEHF 306
           +  +E  L  V                      +   G  + +   P   + M+   E +
Sbjct: 310 MGMVEECLEKVALAIHG--------------KPVVTVGQHEINFEGPYEKLTMYESIEKY 355

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
              +    ++   +        I      G     D +
Sbjct: 356 TGIDVSAMTEE-ELKAVCASLNIEVDASMGRGKLIDEL 392



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 63/205 (30%), Gaps = 36/205 (17%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL--G 425
            +     + K+  I  +      L                +  +     R  +  EL   
Sbjct: 345 KLTMYESIEKYTGIDVSAMTEEELKAVCASLNI-------EVDASMG--RGKLIDELFSE 395

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
            +  N  +  +I D+P      E   +   H                        ++++ 
Sbjct: 396 KVEANLIQPTFITDYPL-----EMTPLAKKHR----------------TKDGLVERFEIF 434

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAA 541
            NG E+ +     +      + F +        +           RA + GMPP  G+  
Sbjct: 435 INGKEVGNAYSELNDPIDQKERFEDQLKLAARGDAEAMVMDDDFVRALEYGMPPTSGLGF 494

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           GIDR+VML+     ++EV  FP  +
Sbjct: 495 GIDRLVMLMTNQSTIQEVLFFPQMR 519


>gi|237807864|ref|YP_002892304.1| asparaginyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237500125|gb|ACQ92718.1| asparaginyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 466

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 74/386 (19%), Positives = 125/386 (32%), Gaps = 52/386 (13%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VG+ + + GW+   R    GI FL I D      V A   +       S     VL +  
Sbjct: 16  VGTTLTVKGWIRTRRDSKAGISFLAIHDGSCFAPVQAVVPNTL-----SNYESDVLRLTT 70

Query: 76  LVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
                    I A+  TGQ  E+ A  + +L   E+        + +      ++  L +R
Sbjct: 71  SCSVEVTGVIQASAGTGQQFEILADSVTVLGFVEDPDTYPMAPKRHSVEYLREHAHLRVR 130

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            + +      R  I  ++      E F+  +TP++TAS  EGA +    S ++  +    
Sbjct: 131 TNMMGAVTRVRNCIAQAIHRFFHDEGFMWIATPLITASDCEGAGEMFRVSTLDMENLPRT 190

Query: 195 PQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +    Y Q                    A    + +   P FR E+  + R   EF+ +
Sbjct: 191 DKGSIDYNQDFFGKEAFLTVSGQLNLETYACAMSKVYTFGPTFRAENSNTSRHLAEFWMV 250

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F + +D     E +L+ VF    N       F                      +
Sbjct: 251 EPEIAFADLNDNAAMAEKLLKYVFSAVLNERRDDMEFFAERVDKDAITRLEQFVSADFAQ 310

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           + Y DAI            P+   +   +EH  +     F   + V    +         
Sbjct: 311 VDYTDAIEILKNSGRTFEFPVEWGIDMSSEHERYLAEEHFKAPVVVKNYPKDI-----KA 365

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIF 360
              R   D     A     PG+  I 
Sbjct: 366 FYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+    + +G++K      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNK----EDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+V+ + G  NVR+V  FP +  
Sbjct: 426 YGTVPHSGFGLGFERLVVYVTGMGNVRDVIPFPRTPR 462


>gi|134078916|emb|CAK48307.1| unnamed protein product [Aspergillus niger]
          Length = 618

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 61/285 (21%), Positives = 116/285 (40%), Gaps = 17/285 (5%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDS-----ACFEIAKSVRSEWVLCID 74
           VR++G ++  R  G  +IF DIR      QVVA               + +R   ++ I 
Sbjct: 125 VRIAGRIYTKRASGAKLIFYDIRAEGVKVQVVAQAQHATGGVPFEAQHEHLRRGDIVGIV 184

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G        T   N   G++ + A ++ +LS      +P        +  RF+ R+LDL 
Sbjct: 185 GF----PGRTSPKNRADGELSIFATEVVLLSPCL-HAIPSEHFGLQDKEQRFRQRYLDLI 239

Query: 135 RDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +   +N  V R++I+  +R      +F+E  TP++ A +        V    +      
Sbjct: 240 MNDKSRNVFVTRSKIVRYIRNFFDNRDFVEVETPMMNAIAGGATAKPFVTHHNDLDMNLF 299

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  
Sbjct: 300 MRVAPELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNLT 358

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           E ++ G+ +  + G   + +                 P  R  +I
Sbjct: 359 EELVSGLVKHITGGYETTFH----TQSGETYNVNWKAPWRRVEMI 399



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 4/95 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++      EI +     +        F      K+  ++           + + G
Sbjct: 483 GLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQARQKDQGDDEAQIIDENFCTSLEYG 542

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 543 LPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 577


>gi|319957389|ref|YP_004168652.1| lysyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419793|gb|ADV46903.1| lysyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 520

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 63/269 (23%), Positives = 112/269 (41%), Gaps = 10/269 (3%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           RL+G +  +R  G   F  + D  G+ Q+  N D         ++   ++ +  +V    
Sbjct: 62  RLTGRIKFIRIMGKAAFAKLEDSEGLVQIYYNRDDLPEGYYNKIKK--LIEVGDIV---E 116

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
           AE       TG+I L    + I+S A   PLP        + IR++ R+LD+  +   K 
Sbjct: 117 AEGFPFVTRTGEITLHCTDLRIVSKA-VHPLPEKFHGLTDQEIRYRQRYLDMIMNPEVKK 175

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             K R+RI++ +R     + F+E  TP++        AR F+          Y L  AP+
Sbjct: 176 TFKLRSRIVSLVRRFFEEKGFLEVETPMMHPIPGGANARPFVTRHNALGVDRY-LRIAPE 234

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G +  F+I   FR+E       P EF  ++   ++   +D++   E +   
Sbjct: 235 LYLKRLIVGGMEAVFEINRNFRNEGMDHTHNP-EFTMIEYYWAWHTYEDLMRLTEELFDY 293

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           +FE       +      + +    R+ G 
Sbjct: 294 LFENLGLPRKLPYGDQEVDFTTPFRKVGY 322



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 28/164 (17%)

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  +      +        +++DFP  E +   ++                    +
Sbjct: 360 LGYLQAELFDAF--VEEKLINPTFVVDFPV-EISPLARR--------------------S 396

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM-----LQAFSNVGISKEVVENRFGGLYR 527
           D     A +++L   G EIA+G    +          +Q  +      +   +      R
Sbjct: 397 DENPEIAERFELFIAGKEIANGFNELNDPLDQYERFKMQVEAKEVTGDDEAMHMDLDYVR 456

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           A   GM P  G   GIDR+VMLL    ++R+V LFP  +    L
Sbjct: 457 ALSYGMAPTAGEGIGIDRLVMLLTNQHSIRDVLLFPAMRPEAKL 500


>gi|327306760|ref|XP_003238071.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326458327|gb|EGD83780.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 609

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 116/262 (44%), Gaps = 15/262 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DSACFEIAKSVR 66
           G       VR++G ++  R  G  +IF D+R      QV         D       + +R
Sbjct: 120 GEQKPEKEVRIAGRIYTKRSSGAKLIFYDLRAEGVKVQVACQAQEATGDMPFEAQHEQLR 179

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ I G        T   N   G++ + A+++ +LS      +P        +  RF
Sbjct: 180 RGDIVGIVGF----PGRTNPKNRDDGELSIFARQVILLSPCL-HQIPSEHYGLKDQEQRF 234

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL  +   +N  V R++I++ +R      +F+E  TP++ A +    A+ F+   
Sbjct: 235 RQRYLDLIMNDSSRNVFVTRSKIVSYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHH 294

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                + + +  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ 
Sbjct: 295 NELNMNLF-MRIAPELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYA 352

Query: 245 EQDDILNTMENVLRGVFEEFSN 266
           +  D++N  E+++ G+ +  + 
Sbjct: 353 DVYDLMNVTEDLVSGLVKHVTG 374



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 4/96 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++      EI +     +        F      KE  ++           + + 
Sbjct: 485 PGLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQARQKEQGDDEAQMIDENFCTSLEY 544

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 545 GLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 580


>gi|329963609|ref|ZP_08301087.1| lysine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328528514|gb|EGF55487.1| lysine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 574

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 60/291 (20%), Positives = 118/291 (40%), Gaps = 10/291 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +         V ++G +   R  G   F++++D  G  QV    D  C   
Sbjct: 36  NAFSTDIKAEFKDDAEPRQVSVAGRMMSRRVMGKASFIELQDSKGRIQVYITRDDICPGE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + AQKI +LS + +    V  +    
Sbjct: 96  DKEMYNTVFKRLLDLGDFIGIEGFVFRTQMGEISIHAQKITVLSKSIKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R++DL  +  + +  +KR +II++MR  +    + E  TPIL +   
Sbjct: 156 YDSFEDPELRYRQRYVDLIVNEGVKETFLKRAKIISTMRTVLDEAGYTEVETPILQSIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+  GF+  ++I   FR+E    +  P E
Sbjct: 216 GASARPFITHHNSLDMDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           F  +++ + + + + +++  E +L  +    +       +   I +    R
Sbjct: 274 FTCVELYVQYKDYNWMMSFTEKLLERICIAVNGCTETEIDGKTISFKAPYR 324


>gi|319903118|ref|YP_004162846.1| lysyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319418149|gb|ADV45260.1| lysyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 576

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 73/428 (17%), Positives = 157/428 (36%), Gaps = 22/428 (5%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +    +    V ++G +   R  G   F++++D  G  QV    D  C E 
Sbjct: 36  NAFSTDIKTEFKDDEEPRQVSVAGRMMSRRVMGKASFIELQDSKGRIQVYITRDDICSEE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + A+K+ +L+ + +    V  +    
Sbjct: 96  DKEMYNTVFKRLLDLGDFIGIEGFVFRTQMGEISIHAKKLTVLAKSLKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                   +R++ R++DL  +  + +  +KR+ II ++R  +    + E  TPIL + + 
Sbjct: 156 YDSFEDPELRYRQRYVDLIVNDGVKETFLKRSTIIKTLRAALDEAGYTEVETPILQSIAG 215

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F           Y L  A + Y + L+  GF+  ++I   FR+E    +  P E
Sbjct: 216 GASARPFTTHHNSLDIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA---IRRYGTDK 290
           F  +++ + + + + +++  E +L  +    +       +   I +      +      +
Sbjct: 274 FTCMELYVQYKDYNWMMSFTEKLLERICIAVNGCPETEIDGKTISFKAPYRRLPILEAIR 333

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW--- 347
                 +   N  E     +        ++  G  +  I  +   G       + ++   
Sbjct: 334 EKTGYDLEGKNEDEIRQVCKALKMEIDDTMGKGKLIDEIFGEFCEGTFIQPTFITDYPVE 393

Query: 348 -----ARSQGQPGLAYIFWRLDESGNVAGM-GPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
                   + +PGL   F  +     +A     +   ++       +++L  +  D   F
Sbjct: 394 MSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERFKDQLKLSEKGDDEAMF 453

Query: 402 IAGDPLKF 409
           I  D LK 
Sbjct: 454 IDQDFLKA 461



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 87/263 (33%), Gaps = 53/263 (20%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W  S  +  L  I   ++        G             I   +  + G D       +
Sbjct: 288 WMMSFTEKLLERICIAVNGCPETEIDGKTISFKAPYRRLPILEAIREKTGYDLEGKNEDE 347

Query: 406 PLKFCSFAADARNHIAQELG---IINCNCFEFC--------WIMDFPFYEWNEEEKKIDF 454
             + C      +  I   +G   +I+    EFC        +I D+P             
Sbjct: 348 IRQVCK---ALKMEIDDTMGKGKLIDEIFGEFCEGTFIQPTFITDYP------------V 392

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             +P T        L           +++L+ NG E+A+     +      + F +    
Sbjct: 393 EMSPLTKMHRSKPGL---------TERFELMVNGKELANAYSELNDPIDQEERFKDQLKL 443

Query: 515 KEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            E  ++          +A Q GMPP  GI  GIDR+ ML+ G   ++EV  FP  +    
Sbjct: 444 SEKGDDEAMFIDQDFLKALQYGMPPTSGIGIGIDRLTMLMTGKAFIQEVLFFPQMR---- 499

Query: 571 LLMGSPSTVSVE----QLRELGL 589
                P  V+ +    +  ELG+
Sbjct: 500 -----PEKVTPKDTPAKFMELGI 517


>gi|226499084|ref|NP_001146902.1| lysyl-tRNA synthetase [Zea mays]
 gi|195604954|gb|ACG24307.1| lysyl-tRNA synthetase [Zea mays]
          Length = 614

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 54/323 (16%), Positives = 123/323 (38%), Gaps = 31/323 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACF 59
           + +Y+T + G+       +   L+G +   R     + F D+       QV+A+  ++  
Sbjct: 127 IEKYKTLNNGE---KLTDATECLAGRIMNKRTSSSKLFFYDLYGGGMKVQVMADARTSEL 183

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A+  +    +    +V              G++ L  +K  +LS    +     GE  
Sbjct: 184 DEAEFSKYHSSVKRGDIV---GICGYPGKSNRGELSLFPKKFVVLSPCLHMMPRQKGEGS 240

Query: 120 Y-------------------PESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE 159
                                +  R++ R+LD+  +  +      R+++++ +R  +   
Sbjct: 241 SVPVSWTPGMGRNIENYVLRDQETRYRQRYLDIMVNHEVRHIFKTRSKVVSFIRKFLDDR 300

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
            F+E  TP++   +   A    +           +  AP+ Y + L+  G DR ++I   
Sbjct: 301 EFLEVETPMMNMIAGGAAARPFITHHNELNMRLFMRIAPELYLKELVVGGLDRVYEIGKQ 360

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           FR+E       P EF   +  M++ + +D++   E +L G+ +E + G  +  +   +  
Sbjct: 361 FRNEGIDLTHNP-EFTTCEFYMAYADYNDLMELTETMLSGMVKELTGGYKIKYHANGVTN 419

Query: 280 DDAIRRYGTDKPDLRNPIIMHNV 302
                 +    P  R   ++ ++
Sbjct: 420 SPIEIDF---TPPFRRIDMIKDL 439



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQ 530
                 +++L  N  E+ +     +   V  Q F      ++  ++    L      A +
Sbjct: 516 RPGLTERFELFVNKHEVCNAYTELNDPVVQRQRFEEQLKDRQSGDDEAMALDETFCAALE 575

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG   GIDR+ MLL  ++N++EV LFP  +
Sbjct: 576 YGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFPAMK 611


>gi|206975106|ref|ZP_03236020.1| aspartyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|229138920|ref|ZP_04267499.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|206746527|gb|EDZ57920.1| aspartyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|228644545|gb|EEL00798.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 428

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL IRD  G+ Q V   + A F+
Sbjct: 1   MKRSLTKEC----TKQGGKVVLLQGWVKKIRHLGNVSFLLIRDRSGVMQCVLENELAGFK 56

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
           +      E V+ + G ++  S   +        IE+ A +++IL+ AE LP  +  ++  
Sbjct: 57  V----DVESVVQVVGQIVETSKTEL-------GIEVLAHEVKILNGAEPLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++  ++S    +   +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVLSLRHERIAAIFKVKSTFVHSFSEFLAENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VL+ +F++ +         L+I
Sbjct: 224 EIGFINDFHEVMQLETDVLQYMFQQVAKNCEKELQLLQI 262



 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     S+  
Sbjct: 293 GDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTMPNNENPSITD 341

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ 
Sbjct: 342 S---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRY 388

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 389 GCPPHGGFGIGLERVVCKLLELTNVREASAFPRD 422


>gi|255531462|ref|YP_003091834.1| lysyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255344446|gb|ACU03772.1| lysyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 573

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 125/335 (37%), Gaps = 23/335 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             + ++G +   R  G   F++++D  G  QV    D  C +  K++ +     +  L  
Sbjct: 53  KNISMAGRIMSRRIMGSASFVELQDSTGRIQVYLKRDDLCPDEDKTLYNTVFKKLLDLGD 112

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKYRFL 131
               +       TG+I +    + +LS + +    V  + E           +R++ R++
Sbjct: 113 FIGIKGYVFTTQTGEISVHVTALTLLSKSLKPLPIVKRDEEGNIYDGFTDPEMRYRQRYV 172

Query: 132 DLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +    +  + R+++IN+MR     + ++E  TPIL        AR F         
Sbjct: 173 DLTVNPGFKQIFINRSKVINTMRGYFDNQGWMEVETPILQPIHGGAAARPFATHHNTLDM 232

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A + Y + L+ +GFD  ++    FR+E       P EF  +++ +++ +   +
Sbjct: 233 PLY-LRIANELYLKRLIVAGFDGVYEFGKMFRNEGMDRTHNP-EFTSMEIYVAYKDYIWM 290

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           +  +E  L  V         V      I ++                + M+   + +   
Sbjct: 291 MAMVEECLEKVALAIHGKPVVKVGDYEINFEGP-----------YEKLTMYESIQKYTGI 339

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           +  V ++   +    +   I      G     D +
Sbjct: 340 DVSVMTEE-EIKTVCKSLGIEIDNSMGRGKLIDEL 373



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 57/182 (31%), Gaps = 33/182 (18%)

Query: 397 DSCFFIAGDPLKFCSFAADA------RNHIAQEL--GIINCNCFEFCWIMDFPFYEWNEE 448
           D       +    C            R  +  EL    +  N  +  +I D+P      E
Sbjct: 340 DVSVMTEEEIKTVCKSLGIEIDNSMGRGKLIDELFSEKVEANLIQPTYITDYPL-----E 394

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
              +   H                        +++L   G EIA+     +      + F
Sbjct: 395 MTPLAKKHR----------------SKEGLVERFELFVMGKEIANAYSELNDPIDQRERF 438

Query: 509 SNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +         +          RA + GMPP  G+  GIDR+VML+     ++EV  FP 
Sbjct: 439 EDQLKLAARGDDEAMAMDDDFIRALEYGMPPTSGLGIGIDRLVMLMTDQSTIQEVLFFPQ 498

Query: 565 SQ 566
            +
Sbjct: 499 MR 500


>gi|255691388|ref|ZP_05415063.1| lysine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260623032|gb|EEX45903.1| lysine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 576

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 55/291 (18%), Positives = 117/291 (40%), Gaps = 10/291 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +    +    V ++G +   R  G   F++++D  G  QV    D  C   
Sbjct: 36  NAFSTDIKAEFKDDEEPRQVSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPGE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + A+K+ +L+ + +    V  +    
Sbjct: 96  DKELYNAVFKRLLDLGDFIGIEGFVFRTQMGEISIHAKKLTVLAKSIKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                   +R++ R++DL  +  + +  +KR  ++ ++R  +    + E  TPIL + + 
Sbjct: 156 YDSFEDPELRYRQRYVDLVVNDGIKETFLKRATVVKTLRNVLDEAGYTEVETPILQSIAG 215

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+  GF+  ++I   FR+E       P E
Sbjct: 216 GASARPFITHHNSLDIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           F  +++ + + + + ++N  E +L  +    +       +   I +    R
Sbjct: 274 FTCMELYVQYKDYNWMMNFTEKLLERICIAVNGCTESVVDGKTISFKAPYR 324


>gi|160885236|ref|ZP_02066239.1| hypothetical protein BACOVA_03235 [Bacteroides ovatus ATCC 8483]
 gi|237714790|ref|ZP_04545271.1| lysyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262406935|ref|ZP_06083484.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294644119|ref|ZP_06721895.1| lysine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294805685|ref|ZP_06764565.1| lysine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|156109586|gb|EDO11331.1| hypothetical protein BACOVA_03235 [Bacteroides ovatus ATCC 8483]
 gi|229445115|gb|EEO50906.1| lysyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262355638|gb|EEZ04729.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292640538|gb|EFF58780.1| lysine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294447101|gb|EFG15688.1| lysine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 575

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 55/291 (18%), Positives = 117/291 (40%), Gaps = 10/291 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +    +    V ++G +   R  G   F++++D  G  QV    D  C   
Sbjct: 36  NAFSTDIKAEFKDDEEPRQVSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPGE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + A+K+ +L+ + +    V  +    
Sbjct: 96  DKELYNAVFKRLLDLGDFIGIEGFVFRTQMGEISIHAKKLTVLAKSIKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                   +R++ R++DL  +  + +  +KR  ++ ++R  +    + E  TPIL + + 
Sbjct: 156 YDSFEDPELRYRQRYVDLVVNDGIKETFLKRATVVKTLRNVLDEAGYTEVETPILQSIAG 215

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+  GF+  ++I   FR+E       P E
Sbjct: 216 GASARPFITHHNSLDIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           F  +++ + + + + ++N  E +L  +    +       +   I +    R
Sbjct: 274 FTCMELYVQYKDYNWMMNFTEKLLERICIAVNGCTESVVDGKTISFKAPYR 324


>gi|116617530|ref|YP_817901.1| lysyl-tRNA synthetase (class II) [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122272269|sp|Q03Z44|SYK_LEUMM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116096377|gb|ABJ61528.1| Lysyl-tRNA synthetase (class II) [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 495

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 79/356 (22%), Positives = 135/356 (37%), Gaps = 33/356 (9%)

Query: 5   RTHSCGDLG----------VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT    +L           + +    V ++G +   R  G +IF D RD  G  QV A  
Sbjct: 36  RTAKAQELHNLYDASSLEELENAKHEVVIAGRMVAKRGAGKVIFADFRDVSGKIQVYARR 95

Query: 55  DS--ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           D     + I K       L I G++M   A         G++ + A ++  LS A   P+
Sbjct: 96  DDLADNYPIIKRADLGDFLGIKGIMMKTEA---------GELTVLATELTHLSKALR-PM 145

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-T 170
           P           R++ R+LDL  +       + R+ II+++R  M   +F+E  TPIL T
Sbjct: 146 PDKFHGISDVETRYRKRYLDLIANEDSFKKFQERSHIISAIRAYMDRNDFLEVETPILQT 205

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +    AR F+          Y +  A + Y + L+  G +R ++I   FR+E       
Sbjct: 206 EAGGAAARPFITHHNALNIDMY-MRIATELYLKRLVVGGMERVYEIGRIFRNEGMDPKHN 264

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  ++   ++++  D+++  E + +      S+        L+I Y       GT  
Sbjct: 265 P-EFTTMESYAAYMDFTDVMDETEGIFKAAASVVSDD-------LKITYQGTEIDLGTKF 316

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                  ++   T      E  V       +  +  +      G    AF +   E
Sbjct: 317 ARKHLVDLIKEQTGIDFWQEMSVEEAQKLADDNHVKYEKYWGVGHIINAFFEEFVE 372



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   E+  +          +    + K  D       +++L   G E A+     +  
Sbjct: 366 FFEEFVEDTLVQPTFVYGHPVEVSPLAKKNTD-DPRFTDRFELFIMGSEYANAFTELNDP 424

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F      +E   +   G       A + GMPP GG+  GIDR+VMLL  +  +R
Sbjct: 425 IDQRARFEAQAAERENGNDEAEGIDEDFIEALEYGMPPTGGLGVGIDRLVMLLTDSDTIR 484

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 485 DVVLFPTMR 493


>gi|303232413|ref|ZP_07319105.1| lysine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481497|gb|EFL44565.1| lysine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 527

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 105/248 (42%), Gaps = 11/248 (4%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +  +R  G + F+ + D  G  Q+    ++   E    +    +    G ++   
Sbjct: 75  SVAGRIRAIRKQGKVCFIVLEDKTGTIQLFLRINNVSEENWNLLGYLDL----GDILQAE 130

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHK 140
              +      GQ+ ++     +LS +   PLP        + IR++ R++DL  +  +  
Sbjct: 131 GSVVRTR--RGQLSIAVTAFVLLSKS-TRPLPEKFHGLADKEIRYRQRYVDLIMNPDVRD 187

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQ 199
             VKR+RI++ +R  M  ++++E  TP++ A      A+ F          FY L  A +
Sbjct: 188 VFVKRSRIVSLIRRFMEEQHYLEVETPMMHAILGGANAKPFTTHFNALDCDFY-LRIATE 246

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+  G DR F+I   FR+E       P EF  ++   ++ +   +    +++ + 
Sbjct: 247 LPLKRLIVGGMDRVFEIGRQFRNEGMDLTHNP-EFTSMEAYCAYSDLAGMKKLTQDMFQR 305

Query: 260 VFEEFSNG 267
           +  E    
Sbjct: 306 IAREVCGC 313



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 71/180 (39%), Gaps = 19/180 (10%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF----PFYEWNEEEKKI 452
           D    + G+P+   +  A  R           C+  E  W  D+      +E  +E  + 
Sbjct: 340 DIVSEVVGEPVSMDTDVAHLRKL---------CDEHEIAWQEDWQAGKLLFELYDELGEQ 390

Query: 453 DFAHNPFTMPQGGMESLKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
              H  F        S      D       +++LV  G E A+     +      Q F++
Sbjct: 391 TIVHPTFVCDYPAEVSPLSKRKDDDPRLTDRFELVICGHEYANAFSELNDPVDQAQRFAD 450

Query: 511 VGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              +K + ++   G      RA + GMPP GGI  GIDR++ML     ++R+V LFP  +
Sbjct: 451 QVRAKGLGDDEAMGYDYDYVRALEYGMPPCGGIGYGIDRMIMLFCNQASIRDVLLFPQMK 510


>gi|169846462|ref|XP_001829946.1| asparaginyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|116508973|gb|EAU91868.1| asparaginyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 582

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 111/561 (19%), Positives = 177/561 (31%), Gaps = 103/561 (18%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
               G  VR+ GWVHR+R    IIF+ +RD  G  Q V +   A    A ++  E  + +
Sbjct: 122 EKHRGQRVRVFGWVHRLRQQKDIIFIVLRDGTGYLQAVLSGRVAQTYSALTLTLESSVEL 181

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFL 131
            G +              G  EL     + L  A   +         +   SI+   R L
Sbjct: 182 VGSLQQVPEG----KTAPGGHELIVDYWKALGPAPGGDDAFTNRLNEKSDPSIQADLRHL 237

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR +     +  R  ++ + R  + + + +E + P L  +  EG           Q +F
Sbjct: 238 VLRGENASSILRLRAYMMTAFRDALHSHDLMEVTPPCLVQTQVEGGATLFKLDYYGQPAF 297

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  + S     F I   FR E+  + R   E+  L+ E++F        
Sbjct: 298 --LTQSSQLYLETCLPS-LGDVFCIQESFRAENSHTRRHLSEYTHLEAELAF-------- 346

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
              + L    E+       S                     L NP+    V +       
Sbjct: 347 ITFDDLMNHIEDVICKTVDSL--------------------LANPVSAALVKQLNPD--- 383

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
                                     R       EW   +G    A      DE GNV  
Sbjct: 384 -----------------FKPPERPFMRMSYVDAIEWLNKRGIQHPA-----EDEQGNVIK 421

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
           +    K       E +   +D + GD               A  A   +  E+G      
Sbjct: 422 VDKEGKPTTDGTGEVLM--VDHKIGD-------------DIAEAAERRMTDEIG------ 460

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL-VCNGFE 490
            +  ++  FP                 F M +  ++  +      +     DL + N  E
Sbjct: 461 -KPIFLHGFP------------AELKAFYMKKAPVKPGQEGGP--VFTESCDLLMPNVGE 505

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G +R   +E +L A+   GI      + +       + G   HGG   G++R +  L
Sbjct: 506 IVGGSMRIADAEELLAAYKREGIDP----DPYYWFTDQRKYGTCEHGGYGLGVERFLAWL 561

Query: 551 LGAKNVREVSLFPMSQNFCDL 571
                VRE SL+P        
Sbjct: 562 ANRYTVRECSLYPRWPGRATP 582


>gi|320540482|ref|ZP_08040132.1| asparaginyl tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320029413|gb|EFW11442.1| asparaginyl tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 466

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 71/389 (18%), Positives = 127/389 (32%), Gaps = 50/389 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G + V S V + GWV   R    GI FL + D      + A  D +       V    + 
Sbjct: 12  GRAAVDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFNPLQAVVDHSLPNYQDEV----LH 67

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  + + + +       EL    I ++   ++        + +      +   L
Sbjct: 68  LTTGCSVEVTGKVVASPGEGQSFELQVTAINVVGWVDDPDTYPMAAKRHSIEYLREVAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--- 188
             R + +      R  +  ++        F   STP++TAS  EGA +    S ++    
Sbjct: 128 RPRTNLIGAVARVRHTLAQAIHRYYHENGFFWVSTPLITASDTEGAGEMFRVSTLDLENL 187

Query: 189 -----------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRTDQGAIDFSEDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNN 273
           + ++ E++F   DD+    E +L+ VF+   N                        VS++
Sbjct: 248 WMIEPEVAFATLDDVAALAEKMLKYVFQAVLNERIDDMKFFAERVDKDAIDRLQRFVSSD 307

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           F ++ Y +A+           NP+   +   +EH  +   + F   + V    +      
Sbjct: 308 FAQVSYTEAVEILLASGQTFENPVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI---- 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 364 -KAFYMRMNDDGKTVAAMDVLAPGIGEII 391



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    +V+ Q 
Sbjct: 347 EKHFKAPVVVKNYPKDIKAFYMRMNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDQR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + +G++K      +G      + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 407 LAEMGLNK----EDYGWYRDLRRYGTVPHAGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|301308639|ref|ZP_07214591.1| lysine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300833163|gb|EFK63781.1| lysine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 576

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 55/272 (20%), Positives = 112/272 (41%), Gaps = 10/272 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV  + D  C +  K   +     +  +    
Sbjct: 55  VSIAGRIMSRRIMGKASFMELQDSEGRIQVYISRDDICPDENKDTYNVVFKKLLDIGDFV 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFLDLR 134
             +        G+I + AQ++ +LS +      V  +            +R++ R++DL 
Sbjct: 115 GIKGFVFRTQMGEISVHAQELTVLSKSLRPLPVVKYKDGVAYDGFNDPELRYRQRYVDLV 174

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            +  +    +KR  II +MR  +    + E  TPIL + +    AR F           Y
Sbjct: 175 VNEGVKDIFMKRAAIIKTMRTALDEAGYTEVETPILQSIAGGASARPFTTHHNSLDIDLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + +++ 
Sbjct: 235 -LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCMELYVQYKDYNWMMSF 292

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            E +L  +    +  +  + +   I +    R
Sbjct: 293 TEKLLERICIAVNGTSESTIDGKTISFKAPFR 324



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 81/236 (34%), Gaps = 40/236 (16%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W  S  +  L  I   ++ +      G             I   +  + G D       +
Sbjct: 288 WMMSFTEKLLERICIAVNGTSESTIDGKTISFKAPFRRLPILEAIKEKTGYDLEGKSEDE 347

Query: 406 PLKFCSFAADARNHIAQELG---IINCNCFEFC--------WIMDFPFYEWNEEEKKIDF 454
               C    + +  I   +G   +I+    EFC        +I+D+P             
Sbjct: 348 IRTICK---ELKMEIDDTMGKGKLIDEIFGEFCEGTFIQPTFIIDYP------------V 392

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             +P T        L           +++L+ NG E+A+     +      + F      
Sbjct: 393 EMSPLTKMHRSKPGL---------TERFELMVNGKELANAYSELNDPIDQEERFKEQLRL 443

Query: 515 KEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            E  ++          RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP  +
Sbjct: 444 SEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLVMLMTGQTTIQEVLLFPQMR 499


>gi|126326269|ref|XP_001370366.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 499

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 88/379 (23%), Positives = 150/379 (39%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL V      V +   +H  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 48  DLTVQKADDVVWVRARIHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 107

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ ++G+V  R       +     +EL  Q+I ++S+AE        +   PE    
Sbjct: 108 KESIVDVEGVV--RKVNQKIGSCSQQDVELHVQRIYVISLAEPRLPLQLDDAIRPEVEGE 165

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R +DLR  T       ++ I +  R  +I + F+E  TP + +++
Sbjct: 166 EEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLIHKGFVEIQTPKIISAA 225

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 226 SEGGANVFTVSYFKSNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 283

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------LR 276
           F  LD+EM+F        D+I +T+  + +G+ E F       N       F      LR
Sbjct: 284 FVGLDIEMAFNYHYHEVIDEIADTLVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR 343

Query: 277 ICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + Y +A+           D+ DL  P    +  + +    ++F +  K  L+V P Y + 
Sbjct: 344 LEYREALALLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFYTMP 403

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 404 DPRNPKQSNSYDMFMRGEE 422



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF             D  + K +  YD+   G EI SG  R H  +++ +   
Sbjct: 391 KYPLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERAL 441

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           + GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP      
Sbjct: 442 HHGIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRDPKRL 497

Query: 570 DL 571
             
Sbjct: 498 TP 499


>gi|257464166|ref|ZP_05628547.1| asparaginyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 463

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 128/376 (34%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
             + +   V+L  WV ++R      FL+I D       QVV +     F+    +     
Sbjct: 13  KETYMDKKVKLGAWVRKIRSQKNFGFLEINDGSFFNGIQVVFDSSLENFDEISRLSIASS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G ++              + E+ A KIEI   A+ L  P+  +R   E +R K   
Sbjct: 73  VIVEGTLVKSEGAG-------QEFEVKASKIEICQKAD-LDYPLQNKRHSFEFLRTKS-H 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +T       R+    ++      +NF+   TPI+T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITGSDAEGAGEMFRITTLDLND 183

Query: 191 FYAL-----------------PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                                     Q       + F   +   P FR E   + R   E
Sbjct: 184 LPKKEDGTVNFQKDFFGKSTNLTVSGQLNGETYCAAFRNIYTFGPTFRAEYSNTARHASE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ EM+F + D  ++  E +++ +     +      NF                   
Sbjct: 244 FWMIEPEMAFADLDVNMDIAEKMVKYIIRYVMDTCPEEMNFFNQFIEKGLFDKLNNVLNN 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+   +   +EH  +     F K + +    +     
Sbjct: 304 DFGRLSYTEAIDILKKSGKKFEYPVEWGIDLQSEHERYLAEEYFKKPVFLVDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  ++NE
Sbjct: 361 -------KAFYMKLNE 369



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  +++D+P        K I      F M           D  +++A   DL+     EI
Sbjct: 349 KPVFLVDYP--------KDIKA----FYMK-------LNEDGKTVRAM--DLLAPQIGEI 387

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    E++ Q  S +G++K      +       + G  PH G   G +R++M L 
Sbjct: 388 IGGSQREDNLEILEQRISELGMNK----EDYSFYLDLRKYGSFPHSGYGLGFERMIMYLT 443

Query: 552 GAKNVREVSLFPMSQN 567
           G  N+R+V  FP + N
Sbjct: 444 GMANIRDVIPFPRTPN 459


>gi|224126015|ref|XP_002329640.1| predicted protein [Populus trichocarpa]
 gi|222870521|gb|EEF07652.1| predicted protein [Populus trichocarpa]
          Length = 603

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 52/350 (14%), Positives = 118/350 (33%), Gaps = 30/350 (8%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V L+G +   R     + F D+       QV+A+   + F+ A+  +    +    +V  
Sbjct: 118 VSLAGRIMSKRSSSSKLFFYDLHGLGAKVQVMADASKSGFDEAEFSKLHSSVKRGDIV-- 175

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---------------------- 117
                       G++ +      +LS    +                             
Sbjct: 176 -GITGFPGKTKRGELSIFPTSFMVLSHCLHMMPRQKAGPGSDASAKKSEVWTPGSVRNPE 234

Query: 118 --REYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                 +  R++ R+LDL  +  + +    R++II  ++  +   +F+E  TP++     
Sbjct: 235 AYILKDQETRYRQRYLDLMLNSEVRQIFKTRSKIIKYIQNFLDDLDFLEVETPMMNMIPG 294

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             A         +      +  AP+ Y + L+  G DR ++I   FR+E       P EF
Sbjct: 295 GAAARPFKTHHNDLNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EF 353

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
              +  M++ + +D++   E +L G+ +E + G  +  +   +  D     +      + 
Sbjct: 354 TTCEFYMAYADYNDLMELTEKMLSGMVKELTGGYKIKYHANGLDKDPIEIDFTPPFRRID 413

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
               +  +    +  +         +    E + +            D++
Sbjct: 414 MIEELEKMANLNIPKDLSSDEATKYLVAACEKFEVKCPPPQTTTRLLDKL 463


>gi|127511746|ref|YP_001092943.1| lysyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166229827|sp|A3QB36|SYK_SHELP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|126637041|gb|ABO22684.1| lysyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 500

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 129/284 (45%), Gaps = 25/284 (8%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +   R      FL I+D  G  Q  A  D     + K +++++     G ++  +
Sbjct: 64  SIAGRIMAKRGP----FLVIQDVSGRIQAYAGKD-----VQKDLKAKYQGLDIGDIIGVT 114

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL-HK 140
            +   +    G + ++ ++ ++L+ A   PLP        +  R++ R++DL  +     
Sbjct: 115 GQLHLSG--KGDLYVNMEEYQLLTKALR-PLPEKFHGLTDQETRYRQRYVDLIVNEESRA 171

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             + R++++ ++R  M+++ F+E  TP++ +      AR F+          Y L  AP+
Sbjct: 172 AFIMRSKVVTAIRNFMVSKEFMEVETPMMHSIPGGASARPFITHHNALDIEMY-LRIAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  
Sbjct: 231 LYLKRLVVGGFERVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSS 289

Query: 260 VFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
           + ++      +            + R+   DAI++Y  D   ++
Sbjct: 290 IAKDLLGDTKLPYGEHTIDFGGPYERLSMLDAIKKYNPDNETIQ 333



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 74/232 (31%), Gaps = 26/232 (11%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL--------DMQDGDSCFFIAGDPL 407
           +AY  ++         +  +AK L                     +   D+      D  
Sbjct: 271 MAYADYKDLMDLTEEMLSSIAKDLLGDTKLPYGEHTIDFGGPYERLSMLDAIKKYNPDNE 330

Query: 408 KFCSFA------ADARNHIAQELGIINCNCFEFCWIMDFPFYEW---NEEEKKIDFAHNP 458
              S         +   ++A+ LG+     +           E       E K+      
Sbjct: 331 TIQSMTYEEVKDVEFMRNLAKSLGMTIEKFWTCG-----QLLEEIFGETAEPKLMQPTFI 385

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
              P       + ND       +++    G E+A+G    + +E   + F     +K+  
Sbjct: 386 TGYPADISPLARRNDENHFITDRFEFFIGGREVANGFSELNDAEDQDKRFKAQVDAKDAG 445

Query: 519 ENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           ++           A + G+PP  G   GIDR+VML      +R+V LFP  +
Sbjct: 446 DDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFPAMR 497


>gi|298479807|ref|ZP_06998007.1| lysine--tRNA ligase [Bacteroides sp. D22]
 gi|298274197|gb|EFI15758.1| lysine--tRNA ligase [Bacteroides sp. D22]
          Length = 575

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 55/291 (18%), Positives = 117/291 (40%), Gaps = 10/291 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +    +    V ++G +   R  G   F++++D  G  QV    D  C   
Sbjct: 36  NAFSTDIKAEFKDDEEPRQVSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPGE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + A+K+ +L+ + +    V  +    
Sbjct: 96  DKELYNAVFKRLLDLGDFIGIEGFVFRTQMGEISIHAKKLTVLAKSIKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                   +R++ R++DL  +  + +  +KR  ++ ++R  +    + E  TPIL + + 
Sbjct: 156 YDSFEDPELRYRQRYVDLVVNDGIKETFLKRATVVKTLRNVLDEAGYTEVETPILQSIAG 215

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+  GF+  ++I   FR+E       P E
Sbjct: 216 GASARPFITHHNSLDIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           F  +++ + + + + ++N  E +L  +    +       +   I +    R
Sbjct: 274 FTCMELYVQYKDYNWMMNFTEKLLERICIAVNGCTESVVDGKTISFKAPYR 324


>gi|219276601|ref|NP_001136422.1| asparaginyl-tRNA synthetase, cytoplasmic isoform 1 [Mus musculus]
 gi|193806326|sp|Q8BP47|SYNC_MOUSE RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148677754|gb|EDL09701.1| asparaginyl-tRNA synthetase, isoform CRA_a [Mus musculus]
          Length = 559

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 72/344 (20%), Positives = 127/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + + G 
Sbjct: 136 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLSDDLCQCYNGVVLSTESSVAVYGT 195

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 196 LNLTPKG----KQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 251

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ I    R       + E +TP L  +  EG           + +F  L Q
Sbjct: 252 NMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 309

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   EF  ++ E  F+  +D+LN +E++
Sbjct: 310 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLNRLEDL 368

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 369 VCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAIEWLKEHDVKKEDG-TFYEFG 427

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           +    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 428 DDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDPRLTE 471



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 476 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 531

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  +L   ++R+V L+P 
Sbjct: 532 ERFLSWILNRYHIRDVCLYPR 552


>gi|322514441|ref|ZP_08067483.1| asparagine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322119648|gb|EFX91710.1| asparagine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 467

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 73/404 (18%), Positives = 134/404 (33%), Gaps = 56/404 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D       Q + N D  
Sbjct: 1   MSKFPTVSEILSGKVAVGEEVAVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINKDLV 60

Query: 58  CF-EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
            + +    + +   + + G V+   AE          +EL A ++E++   E+       
Sbjct: 61  NYNDEVLRLTAGCSVIVTGKVVESPAEGQA-------VELHATQVEVVGWVEDPDTYPMA 113

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + +      +   L  R + +      R  +  ++      + F   +TP++TAS  EG
Sbjct: 114 AKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEG 173

Query: 177 ARDFLVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPC 219
           A +    S ++                 F+          Q      A    + +   P 
Sbjct: 174 AGEMFRVSTLDLENLLRTDEGKVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGPT 233

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------- 266
           FR E+  + R   EF+ ++ E +F    D     +++L+ VF+                 
Sbjct: 234 FRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAKDMLKYVFKAVLEERKDDMQFFAKHI 293

Query: 267 --------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK 316
                    N ++++F ++ Y DAI        +   P+   +   +EH        F  
Sbjct: 294 DKDVITRLENFIASSFAQVDYTDAIEILLKSGKEFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + V    +            R   D     A     PG+  I 
Sbjct: 354 PVVVKNYPKDI-----KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 70/216 (32%), Gaps = 27/216 (12%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y+F  + E          AKH++            +++  +  F   D          
Sbjct: 271 LKYVFKAVLEERKDDMQF-FAKHIDKDVI------TRLENFIASSFAQVDYTDAIEIL-- 321

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEW---NEEEKKIDFAHNPFTMPQGGMESLKGN 472
                 +E        F   W +D          EE  K       +            +
Sbjct: 322 --LKSGKEF------EFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDIKAFYMRLND 373

Query: 473 DLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           D  ++ A   D++  G  EI  G  R    +V+      +G++       +       + 
Sbjct: 374 DGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMVEMGLNP----EDYWWYRDLRKY 427

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G  PH G   G +R+++ + G +N+REV  FP +  
Sbjct: 428 GTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRAPR 463


>gi|313884140|ref|ZP_07817906.1| asparagine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620587|gb|EFR32010.1| asparagine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 432

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 79/348 (22%), Positives = 129/348 (37%), Gaps = 33/348 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCI 73
           +   V ++ WV   R  G I FL +RD     Q V   +      FE  K +  E  L +
Sbjct: 13  LDQEVVVNAWVTNKRSSGKIAFLQLRDGSAYFQAVILKNQVAPELFEQVKHIGQESSLKL 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V +     +         EL     EI+  +E+ P+     +E+       +R L L
Sbjct: 73  RGTVQASDRSAL-------GYELLVSDFEIIGHSEDYPITP---KEHGTDFLMDHRHLWL 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R    H  +  R  II +    M    FI+   PILT S+PEG  +        + ++  
Sbjct: 123 RSSRQHAIMQIRNEIIRATYQFMAENEFIKVDPPILTGSAPEGTTELFHTKYFEEDAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+FVE ++ L   
Sbjct: 181 LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMMEPEMAFVEHEESLQVQ 239

Query: 254 ENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTD-KPDLRNP 296
           E  +  +                             + RI Y DAI     +   D+   
Sbjct: 240 EKYVAYLVRNVIEHCQLALKTLERDIEQLEKYTQLPYPRISYTDAISLLKKNGFEDIEWG 299

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
               +  E F+ +++     IL+   G + + +           C  +
Sbjct: 300 DDFGSPHETFIANQYEKPVFILNYPKGIKPFYMKINPEDPRTVLCADL 347



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 14/146 (9%)

Query: 426 IINCNCFE-FCWIMDF--P--FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           ++  N FE   W  DF  P   +  N+ EK +   + P  + +     +   D  ++   
Sbjct: 287 LLKKNGFEDIEWGDDFGSPHETFIANQYEKPVFILNYPKGI-KPFYMKINPEDPRTVLCA 345

Query: 481 QYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
             DL+      EI  G  R    E + +     G+      + +       + G  PH G
Sbjct: 346 --DLIAPEGYGEIIGGSEREVDYETLAENIEKFGLDL----DTYAWYLDLRKYGTVPHSG 399

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPM 564
              G++R V  L G +++RE + FP 
Sbjct: 400 FGIGLERTVAWLSGIEHIRETAPFPR 425


>gi|322436022|ref|YP_004218234.1| lysyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321163749|gb|ADW69454.1| lysyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 624

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 81/446 (18%), Positives = 149/446 (33%), Gaps = 88/446 (19%)

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
              + +  VKR  I+ ++R    +  ++E  TP++ + +    AR F           Y 
Sbjct: 236 PPNVREVFVKRALILRALRTFFDSRGYLEVETPMMHSIAGGAAARPFTTRHNALDMELY- 294

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  G DR ++I   FR+E   +   P EF  L+   ++    D+++  
Sbjct: 295 LRIAPELYLKRLVVGGMDRVYEINRNFRNEGVSTKHNP-EFTMLEFYQAYANYHDLMDLT 353

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           E +++ V  E +                                           S    
Sbjct: 354 EELIKFVAMEVNG------------------------------------------SYKTR 371

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMG 373
           F+ +      ++ +++        R       E+  +       ++         +A   
Sbjct: 372 FNGVDIDLSVWKKYSMREAIIKFWRPNWAPFFEYEDNDFMKASRWLNKLSQSRDLLASRL 431

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
            +AK  + +  E +      +D     F     L     A        + LG    + FE
Sbjct: 432 EIAKSYDGIEVETLNPIYFPED-----FTDHKFLVATIAA----LEGGEPLGKSIASVFE 482

Query: 434 FC---------WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           F           I DFP             A +P +  +                 +++ 
Sbjct: 483 FLAEPHLVQPTIIYDFPL------------AVSPLSKVKPDEPDW---------VERFEF 521

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIA 540
              GFE+ +     +     L  F      K   ++          RA Q G+PP GG  
Sbjct: 522 YIGGFEVGNAFSELNDPVDQLSRFEAQVAEKARGDDEAMEMDADYVRALQYGLPPTGGEG 581

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+ M+L G +++R+V LFP+ +
Sbjct: 582 IGIDRLTMILTGQRSIRDVILFPLMR 607


>gi|239615657|gb|EEQ92644.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
 gi|327353948|gb|EGE82805.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 609

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 129/353 (36%), Gaps = 20/353 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV-----VANP 54
           + +Y +   G+         +R++G ++  R  G  +IF D+R      QV         
Sbjct: 111 IKQYESLQKGE---QVKDKELRIAGRIYTKRAAGAKLIFYDVRAEGVKIQVACQAQNVTG 167

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D +     + +R   ++ + G        T   N   G++ + A ++ +L+      +P 
Sbjct: 168 DVSFEHQHEHLRRGDIIGVVGF----PGRTAPKNRADGELSIFATEVVLLAPCL-HQIPS 222

Query: 115 FGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                  +  R++ R+LDL  +       + R+++I  +R      +FIE  TP++   +
Sbjct: 223 EHYGLRDQEQRYRQRYLDLIMNDKSRNVFITRSKMITYIRRFFDERDFIEVETPMMNTIA 282

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                   V    +      +  AP+ Y ++L+  G +R +++   FR+E       P E
Sbjct: 283 GGATAKPFVTHHNDLNMDMFMRIAPELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-E 341

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F   +   ++ +  DI+N  E ++ G+ +  + G      F     ++    +      +
Sbjct: 342 FTTCEFYWAYADVYDIMNVTEELVSGLVKHITGG--YETTFHTQTGEEYKINWKAPWKRI 399

Query: 294 RNPIIMHNVT--EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                +   T  +     +         +    +   +       N    D++
Sbjct: 400 EMIPALEEATGEKFPPGDQLHTMETNAFLKKVLKKVNVECTPPETNARMLDKL 452



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 4/95 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++      EI +     +        F      K   ++           + + G
Sbjct: 486 GLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQASQKAQGDDEAQMIDENFCTSLEYG 545

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 546 LPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 580


>gi|332140696|ref|YP_004426434.1| lysyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550718|gb|AEA97436.1| lysyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 522

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 67/325 (20%), Positives = 141/325 (43%), Gaps = 47/325 (14%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R +   +L           + + G+ V ++G +   R      F+ ++D  G  Q  A+ 
Sbjct: 37  RENYADELQAKFGEFDKETLQEQGNKVSIAGRIMAKRGP----FMLLQDMTGRIQAYADK 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+      K++++++     G ++  + +   +    G + ++ ++ E+L+ A   PLP 
Sbjct: 93  DTQ-----KALKAKYGALDIGDIIGVAGDLHKSG--KGDLYVNMEQYELLTKALR-PLPE 144

Query: 115 FGEREYPESIRFKYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  +++ R++DL   +   K  + R++I+N +R  +   +++E  TP+L    
Sbjct: 145 KFHGLSDQETKYRQRYVDLITSEQTRKTFMIRSKIVNGIRNYLTERDYLEVETPMLQVIP 204

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P 
Sbjct: 205 GGATAKPFVTHHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP- 262

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG-------------------NTVSNN 273
           EF  L+   ++ + +D++N  E++LR + E+                             
Sbjct: 263 EFTMLEFYQAYADYNDLMNLTEDMLRTLAEDILGTSIIKNTTKDAEGNVTSEVEYDFGKP 322

Query: 274 FLRICYDDAIRRYGT--DKPDLRNP 296
           F R+   +AI +Y    D+  +R+P
Sbjct: 323 FDRLSMGEAILKYWPEADEAAIRDP 347



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 5/128 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   EEK ++        P       + ND       +++    G E+A+G    +  E
Sbjct: 382 FEATAEEK-LEQPTFITEYPWEVSPLARRNDNNPFITDRFEFFVGGRELANGFSELNDPE 440

Query: 503 VMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F+     K+  ++          RA + G+PP  G   GIDR+ ML   +  +++
Sbjct: 441 DQAERFAKQVEEKDAGDDEAMHFDDDYIRALEYGLPPTAGEGIGIDRLAMLFTDSSTIKD 500

Query: 559 VSLFPMSQ 566
           V LFP  +
Sbjct: 501 VILFPHMK 508


>gi|170717449|ref|YP_001784547.1| asparaginyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189083273|sp|B0UTU8|SYN_HAES2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|168825578|gb|ACA30949.1| asparaginyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 467

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 128/388 (32%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFEI-AKSVRSEWVLC 72
           VG  V + GW+   R    G+ FL I D       Q + N D   +E     + +   + 
Sbjct: 17  VGETVTVRGWIRTRRDSKAGLSFLAIYDGSCFDPIQAIVNNDIENYETEILRLTTGCSVV 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G ++   AE          +EL A KIE+    ++        + +      +   L 
Sbjct: 77  VTGKIVESPAEGQA-------VELQADKIEVSGWVDDPETYPMSAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RTDKGAVDFSQDFFGKESFLTVSGQLNGESYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF    N                      + ++++F
Sbjct: 250 MVEPEIAFATLADNAKLAEDMLKYVFRAVLNEREDDLKFFEKHVDKNVITRLKDFINSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH  +     F   + V    +       
Sbjct: 310 AQIDYTDAIDILLKSGKAFEFPVSWGIDLSSEHERYLAEEYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    EV+ +  + +G+     E+ +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEVLDKRIAEMGLK---AEDYW-WYRDLRR 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 427 YGTVPHAGFGLGFERLIVYVTGVQNIRDVIPFPRTPR 463


>gi|324506723|gb|ADY42863.1| Lysyl-tRNA synthetase [Ascaris suum]
          Length = 603

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 86/576 (14%), Positives = 183/576 (31%), Gaps = 122/576 (21%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPD-----SACFEIAKSVRSEWVLCI 73
            V ++G +   R  G  +IF D+       Q++AN        A  ++ + ++   ++ +
Sbjct: 135 TVNVAGRIFSKRESGGKLIFYDLHGEGTRVQILANARFHKGREAFGDVHERIKRGDIIGV 194

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G           A   +G++ +   ++  L+      LP        +  R++ R+LDL
Sbjct: 195 RG---------HPAKSKSGELSVIPIEVVQLTPCL-HMLPHTHFGLKNQETRYRMRYLDL 244

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSF 191
             +   K+  V R ++I  +R  +    F+E  TP++   +    A+ F+          
Sbjct: 245 IMNPSVKDKFVIRAKMITFLRRYLDNLGFLEVETPMMNQIAGGATAKPFITHHNELDMDL 304

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + L  AP+ Y ++L+  G DR +++   FR+E         E         F   +  + 
Sbjct: 305 F-LRVAPELYHKMLVVGGIDRVYEVGRLFRNEGIDQT-HNPE---------FTTCEFYMA 353

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
                                                            +  +    +E 
Sbjct: 354 YA-----------------------------------------------DYEDLIKLTED 366

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
            +   + +++  Y++   P   G       D    + R     GL            +  
Sbjct: 367 LLSKMVFAIHGTYKIQYHPNGAGTEPVYDIDFTPPFKRVNMYEGL---------EKALGM 417

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
             P    L+     A+  ++ ++ G         P             + + L     + 
Sbjct: 418 KLPTPDTLDTAEANAVIDKIALERG----VECPPPRTTARLLDKL---VGEYL---ESDF 467

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
               +++  P         +I    + +     G+              +++L     EI
Sbjct: 468 ISPTFLVGHP---------QIMSPLSKWHRSIPGL------------TERFELFVVTKEI 506

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIV 547
            +     +      Q F      K+  ++           A + G+PP  G   GIDR+ 
Sbjct: 507 VNAYTELNDPLAQRQRFEQQAKDKQAGDDEAQLIDENFCTALEYGLPPTAGWGMGIDRLT 566

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
           M+   + N++EV  FP  +     +   P+ V  ++
Sbjct: 567 MVFTDSNNIKEVLFFPAMRPEEQKV--GPAPVDEDE 600


>gi|217959728|ref|YP_002338280.1| aspartyl-tRNA synthetase [Bacillus cereus AH187]
 gi|217063033|gb|ACJ77283.1| aspartyl-tRNA synthetase [Bacillus cereus AH187]
          Length = 432

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL IRD  G+ Q V   + A F+
Sbjct: 5   MKRSLTKEC----TKQGGKVVLLQGWVKKIRHLGNVSFLLIRDRSGVMQCVLENELAGFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
           +      E V+ + G ++  S   +        IE+ A +++IL+ AE LP  +  ++  
Sbjct: 61  V----DVESVVQVVGQIVETSKTEL-------GIEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++  ++S    +   +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERIAAIFKVKSTFVHSFSEFLAENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VL+ +F++ +         L+I
Sbjct: 228 EIGFINDFHEVMQLETDVLQYMFQQVAKNCEKELQLLQI 266



 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     S+  
Sbjct: 297 GDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTMPNNENPSITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERVVCKLLELTNVREASAFPRD 426


>gi|108709561|gb|ABF97356.1| Lysyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 595

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 128/346 (36%), Gaps = 35/346 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           + +Y++ + GD     V     L+G +   R     ++F D+       QV A+  ++  
Sbjct: 115 IEKYKSMNVGD---KLVDVTECLAGRIMTKRAQSSKLLFYDLYGGGEKVQVFADARTSEL 171

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E  + ++    L    +V              G++ +  +KI +LS    +      E  
Sbjct: 172 EDNEFIKFHSTLKRGDIV---GVCGYPGKSKRGELSIFPKKIVVLSPCLHMMPRQKSEGS 228

Query: 120 Y-------------------PESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE 159
                                +  R++ R+LDL  +  +      R+++++ +R  +   
Sbjct: 229 AVPTPWAPGMGRNIEKYVLRDQETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDGL 288

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
           +F+E  TP++   +   A    V           +  AP+ Y + L+  G DR ++I   
Sbjct: 289 DFLEVETPMMNMIAGGAAARPFVTHHNELNMRLYMRIAPELYLKELVVGGLDRVYEIGKQ 348

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           FR+E       P EF   +  M++ + +D++   E +L G+ +E + G        +I Y
Sbjct: 349 FRNEGIDLTHNP-EFTTCEFYMAYADYNDLIELTETMLSGMVKELTGGY-------KIKY 400

Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                     + D   P    ++ E           K LS +   +
Sbjct: 401 HANGVEKPPIEIDFTPPFRKIDMIEELEAMAKLNIPKDLSSDEANK 446



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQ 530
                 +++L  N  E+ +     +   V  Q F      ++  ++    L      A +
Sbjct: 497 RPGLTERFELFVNKHEVCNAYTELNDPVVQRQRFEEQLKDRQSGDDEAMALDETFCTALE 556

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG   GIDR+ MLL  ++N++EV LFP  +
Sbjct: 557 YGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFPAMK 592


>gi|167622750|ref|YP_001673044.1| lysyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189082969|sp|B0TTP2|SYK_SHEHH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|167352772|gb|ABZ75385.1| lysyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 501

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 67/327 (20%), Positives = 140/327 (42%), Gaps = 36/327 (11%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H   D+              +G    ++G V   R      FL I+D  G  Q  A  
Sbjct: 37  RKHKAADIQAEFGHNTKEELEGMGIERSIAGRVMAKRGP----FLVIQDVSGRIQAYAGK 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     + K ++ ++     G ++  + +   +    G + ++ ++ ++L+ A   PLP 
Sbjct: 93  D-----VQKDLKEKFQGLDIGDIIGVTGQLHLSG--KGDLYVNMEEYQLLTKALR-PLPE 144

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R++DL  +   +   + R+++++++R  M+ + F+E  TP++ +  
Sbjct: 145 KFHGLTDQETRYRQRYVDLIVNEQSREAFIMRSKVVSAIRNFMVKKEFMEVETPMMHSIP 204

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F         + Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 205 GGASARPFATHHNALDIAMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNP 262

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  ++  M++ + +D+++  E +L  +  E      +            + R+   DAI
Sbjct: 263 EFTMMEFYMAYADFNDLMDLTEEMLSSIATELCGSPQLPYGEHTVDFGGPYARLSMLDAI 322

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           ++Y  D   +++ +    V +     +
Sbjct: 323 KKYNPDNATIQS-MTYEEVKDVEFMRD 348



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E ++         P       + ND       +++    G E+A+G    + +E   + F
Sbjct: 376 ETQLMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVANGFSELNDAEDQDRRF 435

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K+  ++           A + G+PP  G   GIDR+VML      +R+V LFP 
Sbjct: 436 KAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFPA 495

Query: 565 SQ 566
            +
Sbjct: 496 MR 497


>gi|81428525|ref|YP_395525.1| asparaginyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|123769698|sp|Q38X65|SYN_LACSS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|78610167|emb|CAI55216.1| Asparaginyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 432

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 73/338 (21%), Positives = 127/338 (37%), Gaps = 32/338 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
              V   V++  W+   R  G I FL +RD         V +      F++AK V+ E  
Sbjct: 11  KDHVDEEVKIGVWLTDKRSSGKISFLQLRDGSAFFQGVVVKSQVSEEVFQLAKDVKQESS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I G++   +             E+    IE++  + E P+     +E+       +R 
Sbjct: 71  MWITGVIHEDTRSHF-------GYEIEVSNIELIGDSSEYPITP---KEHGIEFLLDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R  II +       E F++   PILT S+PEG  +       +  +
Sbjct: 121 LWLRSKRPFAIMKIRNEIIRATYEFFNQEGFMKMDPPILTGSAPEGTTELFHIEYFDNDA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM+F+EQD+ L
Sbjct: 181 Y--LTQSGQLY-AEAGAMAFGKVFTFGPVFRAEKSKTRRHLTEFWMIEPEMAFMEQDESL 237

Query: 251 NTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPDLR 294
              E  +  + +   +                       + RI YD A+        D++
Sbjct: 238 EVQEKYVAYLVQNVIDHCAYELKLLDRDIDQLKKYTQTPYPRISYDKAVEMLQAADFDIK 297

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
                    E ++  +F     IL+     + + +   
Sbjct: 298 WGDDFGAPDETYLSDQFEQPVFILNYPKAIKPFYMKPH 335



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 57/174 (32%), Gaps = 31/174 (17%)

Query: 405 DPLKFCSFAADARNHIAQELGIINC----NCFE-FCWIMDFPFYEWNEEEKKIDFAHNPF 459
           D       AAD       + G  +     + FE   +I+++P             A  PF
Sbjct: 283 DKAVEMLQAADFDIKWGDDFGAPDETYLSDQFEQPVFILNYP------------KAIKPF 330

Query: 460 TMPQGGMES--LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
            M             DLL+ + +         EI  G  R    + +     ++G+  E 
Sbjct: 331 YMKPHPTRDDVYLCADLLAPEGYG--------EIIGGSERETDFDKLEAEIKSMGLDIEE 382

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            +          + G  PH G   G++R +  + G  ++RE   FP   N    
Sbjct: 383 YQ----WYLDLRRYGSVPHSGFGLGLERAITWICGIDHLREAIPFPRMINRIKP 432


>gi|330910710|gb|EGH39220.1| asparaginyl-tRNA synthetase [Escherichia coli AA86]
          Length = 466

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 128/385 (33%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +     Q E+ A K+E++   E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASPGQGQQFEIQASKVEVVGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +DI    E +L+ VF+                            +  +F ++
Sbjct: 252 PEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDVRMLEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|326474941|gb|EGD98950.1| lysyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326483843|gb|EGE07853.1| lysyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 609

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 116/262 (44%), Gaps = 15/262 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DSACFEIAKSVR 66
           G       VR++G ++  R  G  +IF D+R      QV         D       + +R
Sbjct: 120 GEQKPEKEVRIAGRIYTKRSSGAKLIFYDLRAEGVKVQVACQAQEATGDVPFEAQHEQLR 179

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ I G        T   N   G++ + A+++ +LS      +P        +  RF
Sbjct: 180 RGDIVGIIGF----PGRTNPKNRDDGELSIFARQVILLSPCL-HQIPSEHYGLKDQEQRF 234

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL  +   +N  V R++I++ +R      +F+E  TP++ A +    A+ F+   
Sbjct: 235 RQRYLDLIMNDSSRNVFVTRSKIVSYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHH 294

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                + + +  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ 
Sbjct: 295 NELNMNLF-MRIAPELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYA 352

Query: 245 EQDDILNTMENVLRGVFEEFSN 266
           +  D++N  E+++ G+ +  + 
Sbjct: 353 DVYDLMNVTEDLVSGLVKHVTG 374



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 4/96 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++      EI +     +        F      KE  ++           + + 
Sbjct: 485 PGLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQARQKEQGDDEAQMIDENFCTSLEY 544

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 545 GLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 580


>gi|161503869|ref|YP_001570981.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160865216|gb|ABX21839.1| hypothetical protein SARI_01958 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 492

 Score =  184 bits (467), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 72/391 (18%), Positives = 132/391 (33%), Gaps = 62/391 (15%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSEWVLC 72
           V   V + GWV   R    GI FL + D      V A  +++     E    + +   + 
Sbjct: 42  VDQEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEEVLHLTAGCSVV 101

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V++   +  +        E+ A K+E+    E+        + +      +   L 
Sbjct: 102 VTGKVVASPGQGQS-------FEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLR 154

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R + +      R  +  ++      + F   STP++TAS  EGA +    S ++  +  
Sbjct: 155 PRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLP 214

Query: 193 ALPQA-----------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
              Q                    Q      A    + +   P FR E+  + R   EF+
Sbjct: 215 RNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFW 274

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            L+ E++F + +D     E +L+ VF+                            VS +F
Sbjct: 275 MLEPEVAFADLEDNARLAEAMLKYVFKAVLEERADDMKFFAERVDKDAIARLERFVSTDF 334

Query: 275 LRICYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPG---YEVWAI 329
            ++ Y DA+           NP+    ++ +EH  +     F   + V       + + +
Sbjct: 335 AQVDYTDAVAILARCGKKFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEIKAFYM 394

Query: 330 PAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
              G G   A  D +         PG+  I 
Sbjct: 395 RLNGDGKTVAAMDVL--------APGIGEII 417



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D++  G  EI  G  R    +V+    + +G++K      +       + G  PH G   
Sbjct: 407 DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDLRRYGTVPHSGFGL 462

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R++  + G +NVR+V  FP +  
Sbjct: 463 GFERLIAYVTGVQNVRDVIPFPRTPR 488


>gi|261199768|ref|XP_002626285.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239594493|gb|EEQ77074.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 609

 Score =  184 bits (466), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 129/353 (36%), Gaps = 20/353 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV-----VANP 54
           + +Y +   G+         +R++G ++  R  G  +IF D+R      QV         
Sbjct: 111 IKQYESLQKGE---QVKDKELRIAGRIYTKRAAGAKLIFYDVRAEGVKIQVACQAQNVTG 167

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D +     + +R   ++ + G        T   N   G++ + A ++ +L+      +P 
Sbjct: 168 DVSFEHQHEHLRRGDIIGVVGF----PGRTAPKNRADGELSIFATEVVLLAPCL-HQIPS 222

Query: 115 FGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                  +  R++ R+LDL  +       + R+++I  +R      +FIE  TP++   +
Sbjct: 223 EHYGLRDQEQRYRQRYLDLIMNDKSRNVFITRSKMITYIRRFFDERDFIEVETPMMNTIA 282

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                   V    +      +  AP+ Y ++L+  G +R +++   FR+E       P E
Sbjct: 283 GGATAKPFVTHHNDLNMDMFMRIAPELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-E 341

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F   +   ++ +  DI+N  E ++ G+ +  + G      F     ++    +      +
Sbjct: 342 FTTCEFYWAYADVYDIMNVTEELVSGLVKHITGG--YETTFHTQTGEEYKINWKAPWKRI 399

Query: 294 RNPIIMHNVT--EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                +   T  +     +         +    +   +       N    D++
Sbjct: 400 EMIPALEEATGEKFPPGDQLHTMETNAFLKKVLKKVNVECTPPETNARMLDKL 452



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 4/95 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++      EI +     +        F      K   ++           + + G
Sbjct: 486 GLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQASQKAQGDDEAQMIDENFCTSLEYG 545

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 546 LPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 580


>gi|219275596|ref|NP_081626.2| asparaginyl-tRNA synthetase, cytoplasmic isoform 2 [Mus musculus]
 gi|148677757|gb|EDL09704.1| asparaginyl-tRNA synthetase, isoform CRA_c [Mus musculus]
          Length = 558

 Score =  184 bits (466), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 72/344 (20%), Positives = 127/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + + G 
Sbjct: 135 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLSDDLCQCYNGVVLSTESSVAVYGT 194

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 195 LNLTPKG----KQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 250

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ I    R       + E +TP L  +  EG           + +F  L Q
Sbjct: 251 NMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 308

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   EF  ++ E  F+  +D+LN +E++
Sbjct: 309 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLNRLEDL 367

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 368 VCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAIEWLKEHDVKKEDG-TFYEFG 426

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           +    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 427 DDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDPRLTE 470



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 475 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 530

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  +L   ++R+V L+P 
Sbjct: 531 ERFLSWILNRYHIRDVCLYPR 551


>gi|26346633|dbj|BAC36965.1| unnamed protein product [Mus musculus]
          Length = 547

 Score =  184 bits (466), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 72/344 (20%), Positives = 127/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + + G 
Sbjct: 124 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLSDDLCQCYNGVVLSTESSVAVYGT 183

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 184 LNLTPKG----KQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 239

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ I    R       + E +TP L  +  EG           + +F  L Q
Sbjct: 240 NMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 297

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   EF  ++ E  F+  +D+LN +E++
Sbjct: 298 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLNRLEDL 356

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 357 VCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAIEWLKEHDVKKEDG-TFYEFG 415

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           +    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 416 DDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDPRLTE 459



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 464 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 519

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  +L   ++R+V L+P 
Sbjct: 520 ERFLSWILNRYHIRDVCLYPR 540


>gi|241953821|ref|XP_002419632.1| lysine-tRNA ligase, putative; lysyl-tRNA synthetase, cytoplasmic,
           putative [Candida dubliniensis CD36]
 gi|223642972|emb|CAX43228.1| lysine-tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 594

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 105/257 (40%), Gaps = 5/257 (1%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
            V +SG +   R  G  + F  ++ D   +  +    D+   E  +S+           V
Sbjct: 125 TVSVSGRIMTKRESGSKLKFYVLKGDGVEVQVMAQAQDAPSVEAFESMHEILRRGDIIGV 184

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                +T  A    G++ + A K+++L+      LP        +  R++ R+LDL  + 
Sbjct: 185 TGYPGKTAPAKGGDGELSVFATKVQLLTPCL-HMLPTEHYGFKDQEARYRKRYLDLIMND 243

Query: 138 LHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
             ++  K R++II  +R  +   +F+E  TPIL   +             +      +  
Sbjct: 244 SSRDRFKVRSKIIQYIRKFLDNRDFVEVETPILNVIAGGATAKPFTTHHNDLNMEMFMRI 303

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + + L+  G DR ++I   FR+E       P EF   +   ++ +  D+++  E +
Sbjct: 304 APELFLKELVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTELM 362

Query: 257 LRGVFEEFSNGNTVSNN 273
              + +E +    +  +
Sbjct: 363 FSEMVKEITGDYVIKYH 379


>gi|315055975|ref|XP_003177362.1| lysyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311339208|gb|EFQ98410.1| lysyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 609

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 116/262 (44%), Gaps = 15/262 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DSACFEIAKSVR 66
           G       VR++G ++  R  G  +IF D+R      QV         D       + +R
Sbjct: 120 GEQKPEKEVRIAGRIYTKRSSGAKLIFYDLRAEGVKVQVACQAQEATGDVPFEAQHEQLR 179

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ I G        T   N   G++ + A+++ +LS      +P        +  RF
Sbjct: 180 RGDIVGIVGF----PGRTNPKNRDDGELSIFARQVVLLSPCL-HQIPSEHYGLKDQEQRF 234

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL  +   +N  V R++I++ +R      +F+E  TP++ A +    A+ F+   
Sbjct: 235 RQRYLDLIMNDSSRNVFVTRSKIVSYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHH 294

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                + + +  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ 
Sbjct: 295 NELNMNLF-MRIAPELYLKMLIVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYWAYA 352

Query: 245 EQDDILNTMENVLRGVFEEFSN 266
           +  D++N  E+++ G+ +  + 
Sbjct: 353 DVYDLMNVTEDLVSGLVKHVTG 374



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 4/96 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++      EI +     +        F      KE  ++           + + 
Sbjct: 485 PGLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQARQKEQGDDEAQMIDENFCTSLEY 544

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 545 GLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 580


>gi|148677755|gb|EDL09702.1| asparaginyl-tRNA synthetase, isoform CRA_b [Mus musculus]
 gi|148677756|gb|EDL09703.1| asparaginyl-tRNA synthetase, isoform CRA_b [Mus musculus]
          Length = 515

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 72/344 (20%), Positives = 127/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + + G 
Sbjct: 92  GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLSDDLCQCYNGVVLSTESSVAVYGT 151

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 152 LNLTPKG----KQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 207

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ I    R       + E +TP L  +  EG           + +F  L Q
Sbjct: 208 NMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 265

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   EF  ++ E  F+  +D+LN +E++
Sbjct: 266 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLNRLEDL 324

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 325 VCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAIEWLKEHDVKKEDG-TFYEFG 383

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           +    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 384 DDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDPRLTE 427



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 432 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 487

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  +L   ++R+V L+P 
Sbjct: 488 ERFLSWILNRYHIRDVCLYPR 508


>gi|50551341|ref|XP_503144.1| YALI0D22264p [Yarrowia lipolytica]
 gi|49649012|emb|CAG81342.1| YALI0D22264p [Yarrowia lipolytica]
          Length = 564

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 76/288 (26%), Positives = 124/288 (43%), Gaps = 24/288 (8%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQ--VVANPDSACFEIAK-- 63
             DL  S  G  V     VH  R  G  + F+ +R      Q  +  N DS   ++ K  
Sbjct: 105 IKDLNKSMGGQEVVFRARVHTSRLQGNKMCFVSLRQQSANVQGLLTVNADSISKQMVKFA 164

Query: 64  -SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            SV  E ++ + G V+       +A I    +E++  +  ++S A E P  +  +    E
Sbjct: 165 GSVSLESIVLVKGTVVESPEPVKSATI--QDVEIAISQFFVISKAPEQPPILIEDASRSE 222

Query: 123 -------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                          R   R +DLR  T       +  +    R  ++++ FIE  TP +
Sbjct: 223 AEAEAAGLPVVNLDTRLDARCIDLRTATNQAIFRIQHGVCQLFREFLVSKGFIEIHTPKM 282

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
            A++ EG  +    +     +F A  Q+PQ YKQ+LM+  F+R F+IAP FR E+  + R
Sbjct: 283 IAAASEGGANVFKLNYFKGDAFLA--QSPQLYKQMLMSGDFERVFEIAPVFRAENSNTHR 340

Query: 230 LPGEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVSNNFLR 276
              EF  LD+EM+F E  D +++ +  +   +F E           +R
Sbjct: 341 HMTEFTGLDLEMAFEEHYDEVIDVLSELFIFIFSELKKRYGNDIATVR 388



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 73/234 (31%), Gaps = 38/234 (16%)

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
            +  F    +E  +  G            E   +   G + K L       +        
Sbjct: 365 LSELFIFIFSELKKRYGNDIATVRKQYPVEEFKLPKDGKMVK-LPFSEGVKLLREAGKDV 423

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
           GD                 D      + LG I    ++     DF   +      K   A
Sbjct: 424 GDYE---------------DLSTENEKLLGKIVREKYD----TDFYILD------KFPLA 458

Query: 456 HNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             PF TMP     +          +  YD    G EI SG  R H  E + Q  +   + 
Sbjct: 459 VRPFYTMPDPENPNY---------SNSYDFFMRGEEILSGAQRIHDPEFLKQRMAAHEVD 509

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            E +         AF  G PPH G   G++R+VM  L  KN+R  SLFP     
Sbjct: 510 PESL--GLKDYVDAFAYGAPPHAGGGIGLERVVMFFLDLKNIRRASLFPRDPRR 561


>gi|218128465|ref|ZP_03457269.1| hypothetical protein BACEGG_00035 [Bacteroides eggerthii DSM 20697]
 gi|317475709|ref|ZP_07934969.1| asparaginyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|217989356|gb|EEC55669.1| hypothetical protein BACEGG_00035 [Bacteroides eggerthii DSM 20697]
 gi|316908165|gb|EFV29859.1| asparaginyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 467

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 59/295 (20%), Positives = 108/295 (36%), Gaps = 29/295 (9%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F
Sbjct: 1   MEKISRTKIVDLLKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLANF 60

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+ K + +   L ++G++         A       E+ A++IE+L   +        +
Sbjct: 61  DEEMLKDITTGACLSVNGVLTESVGSGQKA-------EIQAREIEVLGTCDNTYPLQ--K 111

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           + +      +   L  R +T       R  +  ++      + F    TPI+T S  EGA
Sbjct: 112 KGHSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHEFFHKKGFFYFHTPIITGSDCEGA 171

Query: 178 RDFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
                 + +N                 F+    +     Q +  L A+     +   P F
Sbjct: 172 GQMFQVTTMNLYDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F +  D ++  E  ++   +   +       FL
Sbjct: 232 RAENSNTPRHLAEFWMVEPEVAFNDITDNMDLAEEFIKFCVQWALDNCADDVKFL 286



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P     +E K        F M Q         D  +++A  
Sbjct: 342 HERYLVEEHFKRPVILTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 382

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R      ++     + I  + +           + G  PH G   
Sbjct: 383 V-LFPKIGEIIGGSEREADYAKLMNRIEELHIPMKDMW----WYLDTRKFGTCPHSGFGL 437

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G  N+R+V  FP +  
Sbjct: 438 GFERLLLFVTGMTNIRDVIPFPRTPR 463


>gi|52425097|ref|YP_088234.1| asparaginyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|59798508|sp|Q65TR1|SYN_MANSM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|52307149|gb|AAU37649.1| AsnS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 467

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 75/433 (17%), Positives = 138/433 (31%), Gaps = 68/433 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSE 68
           G + +G  V + GWV   R    G+ FL + D       Q + N D   +E     + + 
Sbjct: 13  GRTAIGEKVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIVNYESEVLRLTTG 72

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G V    AE          +EL A+ +E++   E+        + +      + 
Sbjct: 73  CSVIVTGTVSKSPAEGQA-------VELQAETVEVVGWVEDPDTYPMAAKRHSIEYLREV 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++ 
Sbjct: 126 AHLRPRTNIIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 189 G--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+          Q      A    + +   P FR E+  + R  
Sbjct: 186 ENLPRDDKGAVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTTRHL 245

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------- 275
            EF+ ++ E++F    D     E++L+ VF            F                 
Sbjct: 246 AEFWMVEPEVAFATLADNAKLAEDMLKYVFNAVLKERMDDLKFFEKHIDKDVINRLERFV 305

Query: 276 -----RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
                +I Y DAI            P+   +   +EH  +     F   + V    +   
Sbjct: 306 ASDFAQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERYLAEEHFKSPVVVKNYPKDI- 364

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIR 388
                    +AF  R+NE        G       +   G    +G   +   +   +A  
Sbjct: 365 ---------KAFYMRLNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARM 408

Query: 389 VRLDMQDGDSCFF 401
             + +   D  ++
Sbjct: 409 AEMGLNPEDYWWY 421



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++       +      
Sbjct: 371 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNP----EDYWWYRDL 424

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+++ + G +N+REV  FP +  
Sbjct: 425 RKYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRTPR 463


>gi|86151307|ref|ZP_01069522.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|86153627|ref|ZP_01071830.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|157414696|ref|YP_001481952.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|315123958|ref|YP_004065962.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|172047060|sp|A8FKI8|SYK_CAMJ8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|85841654|gb|EAQ58901.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85842588|gb|EAQ59800.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|157385660|gb|ABV51975.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747336|gb|ADN90606.1| Lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315017680|gb|ADT65773.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315932664|gb|EFV11594.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 501

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 63/282 (22%), Positives = 124/282 (43%), Gaps = 17/282 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +  +R  G  IF +I D     Q+  N DS   E+   ++    L +  +V+   
Sbjct: 59  VVAGRLKLLRIAGKSIFANIEDEDTNLQIYFNKDSVGEELYAILKKN--LEVGDIVL--- 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
            +       TG+  L A ++++ + A  +PLP           R++ R++D+  +  + K
Sbjct: 114 VKGFPFVTKTGEFSLHASEVKLATKA-IVPLPEKYHGLTDIEQRYRKRYVDMIMNAEVRK 172

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           + + R+++++ +R     + F+E  TP++   +        V    + G    L  AP+ 
Sbjct: 173 DFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPEL 232

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF+  F+I  CFR+E       P EF  ++   ++    D+++  E +   +
Sbjct: 233 YLKRLVVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTEELFALL 291

Query: 261 FEEFS---------NGNTVSNNFLRICYDDAIRRYGTDKPDL 293
            ++ +              S  F RI Y DA+ +YG    DL
Sbjct: 292 LDKLNLGKTIEFDGKMIDFSKPFERITYKDALCKYGGLDRDL 333



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 76/224 (33%), Gaps = 35/224 (15%)

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGDP----LKFCS 411
           A +  +L+    +   G +            +  L    G D       +     LK   
Sbjct: 289 ALLLDKLNLGKTIEFDGKMIDFSKPFERITYKDALCKYGGLDRDLIEDKEKILTKLKVDG 348

Query: 412 FAADARNHIAQ---EL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
           F A+ +  +     EL    +        +++DFP             + +P +      
Sbjct: 349 FEANEKLELGHLQAELFDNYVEEKLINPTFVIDFP------------ISISPLSRRSDED 396

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF---- 522
             +         A +++L   G E+A+G    +      + F     +K   +       
Sbjct: 397 SQI---------AERFELFICGRELANGFNELNDPLDQYERFLKQIEAKNAGDEEACEMD 447

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                A   GMPP  G   GIDR+VMLL   K++R+V LFP  +
Sbjct: 448 EDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPAMR 491


>gi|312884020|ref|ZP_07743737.1| lysyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368478|gb|EFP96013.1| lysyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 505

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 60/292 (20%), Positives = 128/292 (43%), Gaps = 25/292 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + ++   V ++G +   R      FL I++  G  Q  A  D     + K ++ ++    
Sbjct: 61  LEELNHIVAIAGRIMAKRGP----FLAIQETSGRIQAYAAKD-----VQKELKEKYQGLD 111

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++        +    G + ++ +  E+L+ A   PLP        + +R++ R++DL
Sbjct: 112 IGDIIGVKGALHKSG--KGDLYVNMESYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 168

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +   + R++++ ++R  M ++ ++E  TP++        AR F+          
Sbjct: 169 IVNQDSREAFIVRSKLVAAIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDM 228

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++   ++ +  D+++
Sbjct: 229 Y-LRVAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYQAYSDYKDLMD 286

Query: 252 TMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
             E +L  V  E     ++            + R+   +AI+ Y  +  +++
Sbjct: 287 LTEEMLSSVALEVLGSTSMPYGDETVEFGGKYARMSMFEAIKHYNPEHREIQ 338



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E ++         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 381 EPQLIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 440

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K+  ++           A + G+PP  G   GIDR+ ML      +R+V LFP 
Sbjct: 441 KAQVQAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFPA 500

Query: 565 SQ 566
            +
Sbjct: 501 MR 502


>gi|255514185|gb|EET90447.1| aspartyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 430

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 72/264 (27%), Positives = 116/264 (43%), Gaps = 12/264 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH   DL  S  G  V L+GWVH VR  G + FL +RD  GI QV+         I K 
Sbjct: 3   RTHYIKDLSQSLDGKEVTLAGWVHEVRELGNLTFLLLRDSTGIIQVIGKRGVVGESIIKD 62

Query: 65  VR--SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYP 121
           +    E V+ + G V       +N     G  EL  +++E L+ ++  +P  V G+    
Sbjct: 63  LSLPKESVIKVRGKVK------VNKEAKAG-FELIPEEVENLNPLSTNIPFEVTGKVPVE 115

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              R  +R++D+RR          + ++ +    M A  F +   P + A + EG  +  
Sbjct: 116 LDTRLNFRYIDMRRLNTSAIFSIESTVLRAFTEGMYARGFSQIRPPGIVAEATEGGAELF 175

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                   ++ A  Q+PQ YKQL +  G D+ F I P +R E         E  Q+D+E+
Sbjct: 176 PVQYFEYKTYLA--QSPQLYKQLAIIGGMDKVFMIVPAYRAEKSNDVYHLNESTQMDIEI 233

Query: 242 SFVEQDDILNTMENVLRGVFEEFS 265
            F + +D +  +   +  + +   
Sbjct: 234 GFADHNDAIALLSETVTDIIKAVK 257



 Score =  107 bits (267), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 4/102 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
             ND     +  YD +  G EI+SG  R H  E++++A    G+  +     F     AF
Sbjct: 333 MPNDENPNISNSYDFIYKGIEISSGAQRIHQPELLIEAIKKKGMDPKS----FEFYINAF 388

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +CG PPH G + G++RIVM + G+ N+RE SLFP  +     
Sbjct: 389 RCGAPPHAGWSIGLERIVMKITGSSNIRECSLFPRDRKRVSP 430


>gi|284990815|ref|YP_003409369.1| lysyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284064060|gb|ADB74998.1| lysyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 1132

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 54/270 (20%), Positives = 98/270 (36%), Gaps = 22/270 (8%)

Query: 2   HRYR---THSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           + YR     +   +  +  G          VR++G V  +R  G + F  +RD  G  Q+
Sbjct: 33  YPYRWPPDATAAGIRAAHPGLAPDVRTTDRVRVAGRVELIRRQGWLTFATLRDRTGAVQL 92

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
             +      E              G      AE        G++ +  +   +L  A   
Sbjct: 93  YVDSSVLGPERHAEFDDVDRGDWIG------AEGTVMTTRRGELSVCVEDFAVLGKAL-H 145

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL 169
             P           R++ R++DL  +   +     R   + ++R  +   +F E   P+L
Sbjct: 146 APPPEHAGLSDVETRYRQRYVDLEVNERTRQVFRIRHAAVRAIRRHLEDRDFTEVEGPVL 205

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   AR F+  S       Y L  A + + + L+  G +R F+I   FR+E   + 
Sbjct: 206 QTIQGGASARPFVTHSNALDLDLY-LRIALELHLKRLIVGGLERVFEIGRVFRNEGVDTR 264

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
             P EF  L+   +F +  D++   E ++ 
Sbjct: 265 HNP-EFTLLEAYQAFGDITDMMELTEGLVT 293



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/193 (22%), Positives = 72/193 (37%), Gaps = 27/193 (13%)

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
            A  +       +   + + D  +     G P +    A      +  E   +  +    
Sbjct: 325 FADMIAEATGATMHPAMPIDDARAVLDRLGIPYEASWGAGRLMKEVYDE--KVQHSVVGP 382

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            + +D+P      E   +   H               +D   +   +++L+  GFE+ + 
Sbjct: 383 VFCVDYP-----REVSPLARVHR--------------DDPAYV--ERFELIVAGFELCNA 421

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLL 550
               +     L AF     +K   +   G       RA +CGMP  GG+  GIDR+VMLL
Sbjct: 422 YSEQNDPVEQLAAFEAEARAKSHGDPEAGDVDTDYVRALECGMPCTGGLGIGIDRLVMLL 481

Query: 551 LGAKNVREVSLFP 563
            G  ++REV LFP
Sbjct: 482 AGVDSIREVILFP 494


>gi|213647141|ref|ZP_03377194.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 284

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 52/267 (19%), Positives = 96/267 (35%), Gaps = 22/267 (8%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V   V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDQEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEEV----LHLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A K+E+    E+        + +      +   L  R 
Sbjct: 72  CSVVVTGKVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFS 265
            E++F + +D     E +L+ VF+   
Sbjct: 252 PEVAFADLEDNARLAEAMLKYVFKAVL 278


>gi|14520441|ref|NP_125916.1| asparaginyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|20139961|sp|Q9V251|SYN_PYRAB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|5457656|emb|CAB49147.1| asnS asparaginyl-tRNA synthetase (EC 6.1.1.22) (asparagine--tRNA
           ligase) (ASNRS) [Pyrococcus abyssi GE5]
          Length = 434

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 77/349 (22%), Positives = 142/349 (40%), Gaps = 29/349 (8%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKS 64
            C D+     G  V+L+GWV+     G  IFL IRD  GI Q V   +      FE AK 
Sbjct: 6   YCQDIKPELDGKRVKLAGWVYSNMRVGKKIFLWIRDSTGIIQTVIAKNVVGEDVFETAKK 65

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E  + ++G+V +            G  E+  +K++++    E P+P   E+  PE +
Sbjct: 66  LGRESSVIVEGIVKADER-------APGGAEVHVEKLKVIQAVSEFPIPENPEQASPE-L 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              YR L +R   +   +  +  +I + R  ++ E + E   PIL   + EG        
Sbjct: 118 LLDYRHLHIRSPKVSAIMRVKETLIMAAREWLLREGWHEVFPPILVTGAVEGGATLFKLK 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             ++ ++  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E +++
Sbjct: 178 YFDKVAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWM 234

Query: 245 EQDDILNTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTD 289
           +  DI+   E ++  + +               + +        F RI YD+AI    + 
Sbjct: 235 DLWDIMKVEEELVSYMVQRTLELRKKEIEMFRDDLTTLKNTEPPFPRISYDEAIEILQSK 294

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
              +     M    E  +  EF     +       + + +        +
Sbjct: 295 GVKIEWGDDMGADEERVLTQEFDRPFFVYGYPKHIKAFYMKEDPNDPRK 343



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 53/154 (34%), Gaps = 21/154 (13%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +     ++G          +  D PF+ +             F M +        ND 
Sbjct: 295 GVKIEWGDDMGADEERVLTQEF--DRPFFVY-----GYPKHIKAFYMKED------PNDP 341

Query: 475 LSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
             + A   D++      EI  G  R    + ++Q     G+  +  E          + G
Sbjct: 342 RKVLAA--DMLAPEGYGEIIGGSEREDNYDKLVQRIKEEGMDPKDYE----WYLDLRKYG 395

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             PH G   G++R+V  +L   ++R  +LFP + 
Sbjct: 396 SVPHSGFGLGVERLVAWVLKLDHIRWATLFPRTP 429


>gi|317032210|ref|XP_001394242.2| lysine--tRNA ligase KRS1 [Aspergillus niger CBS 513.88]
          Length = 604

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 61/285 (21%), Positives = 116/285 (40%), Gaps = 17/285 (5%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDS-----ACFEIAKSVRSEWVLCID 74
           VR++G ++  R  G  +IF DIR      QVVA               + +R   ++ I 
Sbjct: 125 VRIAGRIYTKRASGAKLIFYDIRAEGVKVQVVAQAQHATGGVPFEAQHEHLRRGDIVGIV 184

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G        T   N   G++ + A ++ +LS      +P        +  RF+ R+LDL 
Sbjct: 185 GF----PGRTSPKNRADGELSIFATEVVLLSPCL-HAIPSEHFGLQDKEQRFRQRYLDLI 239

Query: 135 RDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +   +N  V R++I+  +R      +F+E  TP++ A +        V    +      
Sbjct: 240 MNDKSRNVFVTRSKIVRYIRNFFDNRDFVEVETPMMNAIAGGATAKPFVTHHNDLDMNLF 299

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++N  
Sbjct: 300 MRVAPELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDVMNLT 358

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           E ++ G+ +  + G   + +                 P  R  +I
Sbjct: 359 EELVSGLVKHITGGYETTFH----TQSGETYNVNWKAPWRRVEMI 399



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 4/95 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++      EI +     +        F      K+  ++           + + G
Sbjct: 483 GLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQARQKDQGDDEAQIIDENFCTSLEYG 542

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 543 LPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 577


>gi|115453943|ref|NP_001050572.1| Os03g0586800 [Oryza sativa Japonica Group]
 gi|55583785|sp|Q6F2U9|SYK_ORYSJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|50399950|gb|AAT76338.1| putative Lysyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|108709560|gb|ABF97355.1| Lysyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549043|dbj|BAF12486.1| Os03g0586800 [Oryza sativa Japonica Group]
          Length = 602

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 128/346 (36%), Gaps = 35/346 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           + +Y++ + GD     V     L+G +   R     ++F D+       QV A+  ++  
Sbjct: 115 IEKYKSMNVGD---KLVDVTECLAGRIMTKRAQSSKLLFYDLYGGGEKVQVFADARTSEL 171

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E  + ++    L    +V              G++ +  +KI +LS    +      E  
Sbjct: 172 EDNEFIKFHSTLKRGDIV---GVCGYPGKSKRGELSIFPKKIVVLSPCLHMMPRQKSEGS 228

Query: 120 Y-------------------PESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE 159
                                +  R++ R+LDL  +  +      R+++++ +R  +   
Sbjct: 229 AVPTPWAPGMGRNIEKYVLRDQETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDGL 288

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
           +F+E  TP++   +   A    V           +  AP+ Y + L+  G DR ++I   
Sbjct: 289 DFLEVETPMMNMIAGGAAARPFVTHHNELNMRLYMRIAPELYLKELVVGGLDRVYEIGKQ 348

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           FR+E       P EF   +  M++ + +D++   E +L G+ +E + G        +I Y
Sbjct: 349 FRNEGIDLTHNP-EFTTCEFYMAYADYNDLIELTETMLSGMVKELTGGY-------KIKY 400

Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                     + D   P    ++ E           K LS +   +
Sbjct: 401 HANGVEKPPIEIDFTPPFRKIDMIEELEAMAKLNIPKDLSSDEANK 446


>gi|332994016|gb|AEF04071.1| lysyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 518

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 67/313 (21%), Positives = 137/313 (43%), Gaps = 40/313 (12%)

Query: 10  GDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           G+L      + G+ V ++G +   R      F+ ++D  G  Q  A+ D+      K+++
Sbjct: 49  GELDKETLQEQGNKVSIAGRIMAKRGP----FMLLQDMTGRIQAYADKDTQ-----KALK 99

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +++     G ++  +   +      G + ++ +K  +L+ A   PLP        +  ++
Sbjct: 100 AQYGALDIGDIIGVAG--VLHKSGKGDLYVNTEKYALLTKALR-PLPEKFHGLSDQETKY 156

Query: 127 KYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL   +   K  + R++I+N +R  +   +F+E  TP+L        A+ F+   
Sbjct: 157 RQRYVDLITSEQTRKTFMIRSKIVNGIRNYLTQRDFLEVETPMLQVIPGGATAKPFVTHH 216

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  L+   ++ 
Sbjct: 217 NALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMLEFYQAYA 274

Query: 245 EQDDILNTMENVLRGVFEEFSN-------------------GNTVSNNFLRICYDDAIRR 285
           + +D++N  E++LR + E+                             F R+   +AI +
Sbjct: 275 DFNDLMNLTEDMLRTLAEDILGSSIITNTTKDTDGNVVSEVQYDFGKPFERLSMGNAILK 334

Query: 286 YGTDKPD--LRNP 296
           Y  +  +  +R+P
Sbjct: 335 YWPEANEAAIRDP 347



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 5/128 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   EEK ++        P       + ND       +++    G E+A+G    + SE
Sbjct: 382 FEATAEEK-LEQPTFITEYPWEVSPLARRNDENPFITDRFEFFVGGRELANGFSELNDSE 440

Query: 503 VMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + FS     K+  ++          RA + G+PP  G   GIDR+ ML   +  +++
Sbjct: 441 DQAKRFSKQVEEKDAGDDEAMHYDEDYIRALEYGLPPTAGEGIGIDRLAMLFTDSPTIKD 500

Query: 559 VSLFPMSQ 566
           V LFP  +
Sbjct: 501 VILFPHMK 508


>gi|224534853|ref|ZP_03675422.1| asparagine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224513793|gb|EEF84118.1| asparagine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 462

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 134/375 (35%), Gaps = 51/375 (13%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEI--AKSVRSEWVLCIDGL 76
           V ++GW+   R +G I F+++ D   +   Q V N +   F+    K + +   + + GL
Sbjct: 18  VTINGWIRTKRSNGKIGFIEVNDGSTLKGIQAVINEEENQFDEKDLKKLTTGASISLTGL 77

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++   A+  N        E+      ++  A+    P+  +R   E +R +   L +R +
Sbjct: 78  LVESPAKGQN-------YEIKTYSFNVIGEADPKTYPLQKKRHTFEFLR-EIAHLRIRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV---------- 186
           T       R +I   +        F   +TPI+T++  EGA +    S +          
Sbjct: 130 TFGAVARIRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKLNNSLS 189

Query: 187 ---NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
               +  F+   A      Q      A    + +   P FR E+  + R   EF+ ++ E
Sbjct: 190 NIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWMIEPE 249

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR---------------------ICY 279
           M+F +  D +   E++L+ +     N      +FL                      I Y
Sbjct: 250 MAFYKLSDNIVLAEDLLKYLLSSILNECPQDMDFLENYIEKGLIKKLENVINSSFEVITY 309

Query: 280 DDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
             AI    + K     NP    ++ T+H  +    +F K + V    + +         +
Sbjct: 310 TKAIEILESSKKSFEINPYWGVDLQTDHERYLTEEIFKKPVVVIDYPKNFKAFYMKINKD 369

Query: 338 RAFCDRMNEWARSQG 352
                 M+      G
Sbjct: 370 NKTVKGMDVLVPRIG 384



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 379 LVPRIGEIIGGSEREDDLQKLENRIKELNLNI----EHLNWYLDLRRFGSTPHSGFGLGL 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V    G  N+R+   FP +  
Sbjct: 435 ERLVQYSTGISNIRDSIPFPRTPK 458


>gi|332883057|gb|EGK03341.1| asparaginyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 494

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 55/289 (19%), Positives = 103/289 (35%), Gaps = 24/289 (8%)

Query: 5   RTHSCGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           RT     L    + G+ V + GWV  +R +  + F+ + D   I  +    D   F    
Sbjct: 34  RTKIVDLLRKEKEFGATVAVKGWVRTIRGNKYVNFIHLNDGSTIHNLQIVADVEKFGE-- 91

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
              + +     G  +    + + +      +E+ A  +EI   A+    P+  +    E 
Sbjct: 92  ---TFFKPVSTGACIHVIGKLVESQGKGQTMEIQADSVEIYGTADPETYPLQKKGHSLEF 148

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +  +L  R +T       R  +  ++        F    TPI+TAS  EGA      
Sbjct: 149 LR-EIAYLRPRTNTFGAIFRIRHHMAYAIHKYFNDNGFFYFHTPIVTASDAEGAGSMFQV 207

Query: 184 SRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           + ++                 F+          Q +  L A      +   P FR E+  
Sbjct: 208 TTLDFNNVPRNDKGQVDYVEDFFGRQTNLTVSGQLEGELGAMALGAIYTFGPTFRAENSN 267

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           + R   EF+ ++ E++F +  D ++  E+ L+ +             FL
Sbjct: 268 TPRHLAEFWMIEPEVAFYDIHDNMDLAEDFLKYLIRYALENCKDDLEFL 316



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 52/333 (15%), Positives = 102/333 (30%), Gaps = 52/333 (15%)

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEH-----FVHSEFRVFSKILSVNPGYEVWAIP 330
           R     AI +Y  D         +   ++              F+ +   + G   +   
Sbjct: 169 RHHMAYAIHKYFNDNGFFYFHTPIVTASDAEGAGSMFQVTTLDFNNVPRNDKGQVDYVED 228

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIF-----WRLDESG------NVAGMGPVAKHL 379
             G   N     ++       G   L  I+     +R + S           + P     
Sbjct: 229 FFGRQTNLTVSGQLE---GELGAMALGAIYTFGPTFRAENSNTPRHLAEFWMIEPEVAFY 285

Query: 380 NIVNTEAIRV---------RLDMQDGDSCFFIAG------DPLKFCSFAADARNHIAQEL 424
           +I +   +            L+    D  F          D L F +     R    + +
Sbjct: 286 DIHDNMDLAEDFLKYLIRYALENCKDDLEFLSEHFDKELIDRLNFVTANDFVRLTYTEGV 345

Query: 425 GIINCNCFEFCWIMDFPFY---EWNEEEKKIDFAHNPF-----TMPQGGMES--LKGNDL 474
            I+  +  +F    +FP Y   +   E ++     +       T     ++S  +K N+ 
Sbjct: 346 EILEKSGHKF----EFPVYWGADLQSEHERYLVEKHFKRPVILTDYPKEIKSFYMKQNED 401

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
                    L     EI  G  R    + ++     +G++ + +           + G  
Sbjct: 402 GKTVRGMDVLFPKIGEIIGGSEREADYDKLITRTKELGMNTDPIW----WYLETRKFGTA 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PH G   G +R+++ + G  N+R+V  FP + N
Sbjct: 458 PHAGFGLGFERLILFITGMANIRDVIPFPRTPN 490


>gi|260061783|ref|YP_003194863.1| lysyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785915|gb|EAR17084.1| lysyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 563

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 13/279 (4%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS--EWVLCI 73
           + G  V ++G +   R  G   F +++D  G  Q+  N D  C    KS  +     L  
Sbjct: 44  EEGKHVVMAGRLMSRRIQGKASFAELQDSAGRIQLYFNRDEICEGEDKSAYNDIYKKLLD 103

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRF 126
            G ++    E     +  G+  +  ++  +LS A         + E            R+
Sbjct: 104 IGDIIGIEGELFKTQV--GEKTVRVKRFTLLSKALRPLPLPKKDAEGKVFDEFNDPEQRY 161

Query: 127 KYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R++DL  +   +   VKRT+I NS+R     + ++E  TPIL       A        
Sbjct: 162 RMRYVDLVVNPNVRETFVKRTKITNSIRRFFNEKGYLEVETPILQPIPGGAAARPFQTHH 221

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G    L  A + Y + L+  GFD  ++ A  FR+E       P EF  +++ +++ +
Sbjct: 222 NALGIPLYLRIANELYLKRLIVGGFDGVYEFAKDFRNEGMDRTHNP-EFTVMELYVAYKD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            + ++ T E +L  V  E +    VS     I +     
Sbjct: 281 YNWMMETTEQLLERVAREANGSTRVSAGGETIDFKAPYP 319



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 4/128 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+ NG EIA+     +      + F
Sbjct: 373 EHHYVQPTFIIDYPKEMSPLTKAHRSKPGLTERFELLVNGKEIANAYSELNDPIDQRERF 432

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  E  ++          RA + GMPP  GI  GIDR+VMLL    +++EV  FP 
Sbjct: 433 EEQLKLSEKGDDEAMFIDRDFLRALEFGMPPTSGIGIGIDRLVMLLTDNSSIQEVLFFPQ 492

Query: 565 SQNFCDLL 572
            +     L
Sbjct: 493 MKPEKKPL 500


>gi|238795874|ref|ZP_04639387.1| Asparaginyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238720337|gb|EEQ12140.1| Asparaginyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 466

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 139/424 (32%), Gaps = 50/424 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSE 68
           G + V S V + GWV   R    GI F+ + D      + A  ++      +    + + 
Sbjct: 12  GRAAVDSEVTVRGWVRTRRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTTG 71

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G V++   E  +        E+ A  I+++   ++        + +      + 
Sbjct: 72  CSVEVTGTVVASPGEGQS-------FEIQATAIKVVGWVDDPDTYPMAAKRHSIEYLREV 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R + +      R  +  ++        +   STP++TAS  EGA +    S ++ 
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 189 --------------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q      AS   + +   P FR E+  + R  
Sbjct: 185 ENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYASALSKVYTFGPTFRAENSNTSRHL 244

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTD 289
            EF+ ++ E++F   DD+    E +L+ VF+   N       F   R+  D   R     
Sbjct: 245 AEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERVDKDALDRLQRFV 304

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKI------------LSVNPGYEVWAIPAKGGGGN 337
             D    +   +  E    S  +  + +                  ++   +        
Sbjct: 305 TSDFAQ-VNYTDAIEILKASGQKFENDVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI 363

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           +AF  RMNE        G       +   G    +G   +   +   +A    + +   D
Sbjct: 364 KAFYMRMNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLEEMGLNKED 416

Query: 398 SCFF 401
             ++
Sbjct: 417 YWWY 420



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 43/120 (35%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    +V+   
Sbjct: 347 EKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDAR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              +G++K      +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 407 LEEMGLNK----EDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRTPR 462


>gi|31127138|gb|AAH52849.1| Asparaginyl-tRNA synthetase [Mus musculus]
          Length = 548

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 72/344 (20%), Positives = 127/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + + G 
Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLSDDLCQCYNGVVLSTESSVAVYGT 184

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 185 LNLTPKG----KQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 240

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ I    R       + E +TP L  +  EG           + +F  L Q
Sbjct: 241 NMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 298

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   EF  ++ E  F+  +D+LN +E++
Sbjct: 299 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLNRLEDL 357

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 358 VCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAIEWLKEHDVKKEDG-TFYEFG 416

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           +    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 417 DDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDPRLTE 460



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHG    G+
Sbjct: 465 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGEYGLGL 520

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  +L   ++R+V L+P 
Sbjct: 521 ERFLSWILNRYHIRDVCLYPR 541


>gi|307721320|ref|YP_003892460.1| lysyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306979413|gb|ADN09448.1| lysyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 506

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 15/290 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
              D      +SG +  +R  G   F+ I D  G+ Q+  + D+       ++  + +  
Sbjct: 51  NKRDENRHYIVSGRIKFLRIMGKASFVKIEDESGMLQIYVSRDNLPEGFYNTIFKKNIEV 110

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G ++             G++ L A   ++L+ A   PLP        + IR++ R+LD
Sbjct: 111 --GDIIEVGG--FPFVTGQGELSLHADSFKLLTKAIA-PLPEKFHGITDKEIRYRKRYLD 165

Query: 133 LRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           L  +  + K    R+R+I+  R     + F+E  TP++   +        V      G  
Sbjct: 166 LIMNSEVRKTFQIRSRVISLTRRFFEDKGFLEVETPMMHPIAGGANAKPFVTHHNALGVD 225

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  AP+ Y + L+  GF+  F+I   FR+E   +   P EF  ++   ++    D++ 
Sbjct: 226 RYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDATHNP-EFTSIEFYWAYKTYKDLIE 284

Query: 252 TMENVLRGVFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
             +   + +FE           +     +NF  I   +++   G    D+
Sbjct: 285 ITKEYFQYLFEHLDLPTLLPYGDLEVNFDNFQEIPLIESLTSIGDVPADV 334



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 75/234 (32%), Gaps = 24/234 (10%)

Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398
                + E  +   Q    Y+F  LD    +          N      I     +  GD 
Sbjct: 277 KTYKDLIEITKEYFQ----YLFEHLDLPTLLPYGDLEVNFDNFQEIPLIESLTSI--GDV 330

Query: 399 CFFIAGDPLKFCSFAA--DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
              +  D  K  ++             LG +    F+          E+ EE  K+    
Sbjct: 331 PADVTRDKEKIIAYLNEKGVTVKPGMNLGQLQGELFD----------EFVEE--KLIDPT 378

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
                P       + +D       +++L   G EIA+     +     L  F     +KE
Sbjct: 379 FITEYPVEISPLARRSDEHPEITERFELFIAGREIANAFSELNDPIDQLSRFEGQMAAKE 438

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             ++           A   GM P  G   GIDR+VMLL    ++R+V LFP  +
Sbjct: 439 SGDDEAHEMDSDFVEALSYGMAPTAGQGIGIDRLVMLLTNEHSIRDVLLFPAMK 492


>gi|301170040|emb|CBW29644.1| asparaginyl tRNA synthetase [Haemophilus influenzae 10810]
          Length = 467

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 74/429 (17%), Positives = 138/429 (32%), Gaps = 68/429 (15%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 17  IGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYENEILRLTTGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G ++   AE          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGKIVESPAEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F   +D     E++L+ VF                           N V+++F
Sbjct: 250 MVEPEVAFATLEDNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENFVNSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH        F   + V    +       
Sbjct: 310 AQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
                R   D     A     PG+  I            +G   +   +   +     + 
Sbjct: 365 KAFYMRLNDDEKTVAAMDVLAPGIGEI------------IGGSQREERLEVLDKRMEEMG 412

Query: 393 MQDGDSCFF 401
           +   D  ++
Sbjct: 413 LNPDDYWWY 421



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
             +D  ++ A   D++  G  EI  G  R    EV+ +    +G++ +            
Sbjct: 371 LNDDEKTVAAM--DVLAPGIGEIIGGSQREERLEVLDKRMEEMGLNPDDYW----WYRDL 424

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 425 RKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPR 463


>gi|16759869|ref|NP_455486.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142358|ref|NP_805700.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56413951|ref|YP_151026.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|168233422|ref|ZP_02658480.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168237106|ref|ZP_02662164.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168466597|ref|ZP_02700459.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168822065|ref|ZP_02834065.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194470581|ref|ZP_03076565.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194734630|ref|YP_002114055.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197362874|ref|YP_002142511.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198243330|ref|YP_002214926.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205352207|ref|YP_002226008.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856391|ref|YP_002243042.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213162084|ref|ZP_03347794.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213424614|ref|ZP_03357397.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213581037|ref|ZP_03362863.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213612501|ref|ZP_03370327.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|238913227|ref|ZP_04657064.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289823917|ref|ZP_06543517.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|17433736|sp|Q56112|SYN_SALTI RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|81360282|sp|Q5PGF0|SYN_SALPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|25293063|pir||AF0616 asparagine-tRNA ligase (EC 6.1.1.22) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16502162|emb|CAD05400.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137988|gb|AAO69549.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56128208|gb|AAV77714.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|194456945|gb|EDX45784.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194710132|gb|ACF89353.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195631055|gb|EDX49641.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197094351|emb|CAR59863.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197289886|gb|EDY29247.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197937846|gb|ACH75179.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205271988|emb|CAR36832.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205332405|gb|EDZ19169.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205341479|gb|EDZ28243.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|206708194|emb|CAR32487.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|320085243|emb|CBY95028.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|322616430|gb|EFY13339.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322619680|gb|EFY16555.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322622624|gb|EFY19469.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322629773|gb|EFY26548.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632505|gb|EFY29251.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322637000|gb|EFY33703.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641461|gb|EFY38099.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322646073|gb|EFY42589.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649625|gb|EFY46056.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322654074|gb|EFY50397.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322658606|gb|EFY54868.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322663463|gb|EFY59665.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322670199|gb|EFY66339.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322671435|gb|EFY67557.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322676791|gb|EFY72858.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322682715|gb|EFY78734.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686395|gb|EFY82377.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195918|gb|EFZ81085.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323199794|gb|EFZ84883.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202787|gb|EFZ87823.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323209058|gb|EFZ93995.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323209973|gb|EFZ94880.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217982|gb|EGA02697.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323222013|gb|EGA06400.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323226587|gb|EGA10792.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323229783|gb|EGA13906.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233008|gb|EGA17104.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240743|gb|EGA24785.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323243059|gb|EGA27080.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323249778|gb|EGA33680.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252749|gb|EGA36587.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323259163|gb|EGA42807.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323259986|gb|EGA43614.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323268013|gb|EGA51492.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269861|gb|EGA53310.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326622679|gb|EGE29024.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326627252|gb|EGE33595.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 466

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 126/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V   V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDQEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEEV----LHLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A K+E+    E+        + +      +   L  R 
Sbjct: 72  CSVVVTGKVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + +D     E +L+ VF+                            VS +F ++
Sbjct: 252 PEVAFADLEDNARLAEAMLKYVFKAVLEERADDMKFFAERVDKDAIARLERFVSTDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVAILERCGKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|324326233|gb|ADY21493.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 428

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL IRD  G+ Q V   + A F+
Sbjct: 1   MKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLIRDRSGVMQCVLENELAGFK 56

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
           +      E V+ + G ++  S   +        IE+ A +++IL+ AE LP  +  ++  
Sbjct: 57  V----DVESVVQVVGQIVETSKTEL-------GIEVLAHEVKILNGAEPLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVLSLRHERTAAIFKVKSTLVQSFSKFLIENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERAFEIAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 224 EIGFINDFHEVMQLETDVLRYMFQQVAKNCEKELQLLQI 262



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 63/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     S+  
Sbjct: 293 GDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTMPNNENPSITD 341

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ 
Sbjct: 342 S---------FDLLYKGLEITSGAQRIHNYEMLLTSFKEKGLHP----DKFQSYLNTFRY 388

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V   L   NVRE S FP  
Sbjct: 389 GCPPHGGFGIGLERVVYKFLELSNVREASAFPRD 422


>gi|255037757|ref|YP_003088378.1| lysyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254950513|gb|ACT95213.1| lysyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 571

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 58/335 (17%), Positives = 125/335 (37%), Gaps = 23/335 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F + +D  G  Q+    D  C    K++ +     +  +  
Sbjct: 51  KHVTMAGRLMGFRIMGSAAFAEFQDSTGRVQLYFRRDDLCPGEDKTLYNTVFKKLLDIGD 110

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKYRFL 131
             +         TG+I +  Q+ +IL+ +      V  + +           +R++ R++
Sbjct: 111 MIAVTGFVFTTQTGEISVHVQEFKILNKSLRPLPVVKRDEDGNVHDGFTDPELRYRQRYV 170

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL     + +  +KR RII +MR    +  ++E  TP+L +      AR F         
Sbjct: 171 DLIVNPEVREIFIKRARIITTMRSHFDSNGWLEVETPVLQSIHGGAAARPFTTHHNALDL 230

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A + + + L+  GF+  ++    FR+E       P EF  +++ +++ +   +
Sbjct: 231 GLY-LRIATELHLKRLIVGGFEGVYEFGKLFRNEGMDRTHNP-EFTTVELYVAYKDYLWM 288

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           +   E VL  V    +     + N + + +     R           + + +  + F   
Sbjct: 289 MKMTEEVLEKVALAVNGTTKATFNGVELDFAGPYPR-----------LSITDAIKQFTGL 337

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           +     ++ ++      W +      G     D +
Sbjct: 338 DVEALDEV-AIREQCRAWGMEVNESMGKGKLIDEI 371



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS----NVGISKEVVENRFGGLYRAFQ 530
                 +++L  NG EIA+     +      + F           +          R+ +
Sbjct: 403 KKGMVERFELFVNGREIANAYSELNDPIEQKERFEDQLRLKEKGDDEAMEMDDDFIRSLE 462

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GMPP  GI  GIDR+ MLL    +++EV  FP  +
Sbjct: 463 YGMPPTAGIGIGIDRLTMLLTDNVSIQEVIFFPQMR 498


>gi|167765417|ref|ZP_02437530.1| hypothetical protein BACSTE_03805 [Bacteroides stercoris ATCC
           43183]
 gi|167697045|gb|EDS13624.1| hypothetical protein BACSTE_03805 [Bacteroides stercoris ATCC
           43183]
          Length = 467

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 59/295 (20%), Positives = 109/295 (36%), Gaps = 29/295 (9%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F
Sbjct: 1   MEKISRTKIVDLLKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLANF 60

Query: 60  E--IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           +  + K + +   L ++G++         A       E+ A++IE+L   +        +
Sbjct: 61  DEQMLKEITTGACLSVNGVLTESVGSGQTA-------EIQAREIEVLGTCDNTYPLQ--K 111

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           + +      +   L  R +T       R  +  ++      + F    TPI+TAS  EGA
Sbjct: 112 KGHSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHEFFHKKGFFYFHTPIITASDCEGA 171

Query: 178 RDFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
                 + +N                 F+    +     Q +  L A+     +   P F
Sbjct: 172 GQMFQVTTMNLYDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F +  D ++  E  ++   +   +       FL
Sbjct: 232 RAENSNTPRHLAEFWMVEPEVAFNDITDNMDLAEEFIKFCVQWALDNCADDVKFL 286



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 4/99 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +K ND          L     EI  G  R      ++     + I  + +          
Sbjct: 369 MKQNDDGKTVRAMDVLFPKIGEIIGGSERESDYAKLMNRIEELHIPMKDMW----WYLDT 424

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+++ + G  N+R+V  FP +  
Sbjct: 425 RKFGTCPHSGFGLGFERLLLFVTGMTNIRDVIPFPRTPR 463


>gi|89897698|ref|YP_521185.1| asparaginyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|219670847|ref|YP_002461282.1| asparaginyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|123091599|sp|Q24MK1|SYN_DESHY RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|89337146|dbj|BAE86741.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219541107|gb|ACL22846.1| asparaginyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 463

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 71/350 (20%), Positives = 122/350 (34%), Gaps = 51/350 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
             + +   +++SGWV  +R      F++I D       QVV   D   FE    V +   
Sbjct: 13  TPAYLNQELQISGWVRTLRVSKSFGFIEINDGSFFKGIQVVFEEDLNNFEEIAKVATGSS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L I GL++                EL AQ I I         P+  +R   E +R     
Sbjct: 73  LIIKGLLVESPG-------AKQPFELKAQSIMIEGAC-SGDYPLQKKRHSFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++      + F+   TPI+T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFAAVFRVRSLVAYAIHKFFQDKGFVYIHTPIITGSDAEGAGEMFRVTTLDLDA 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q         F   +   P FR E+  + R   E
Sbjct: 184 LPRTEEGRIDYAKDFFGKETNLTVSGQLNAETYCMAFRNVYTFGPTFRAENSNTARHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSN 272
           F+ ++ E++F +  D +   E +++ +                            N V++
Sbjct: 244 FWMIEPEIAFADLQDDMELAEEMMKYLISYVLEHAPEEMAFFNEFVDKTLFDRLDNIVNS 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSV 320
           +F R+ Y +AI     +K     P+       TEH      ++F K + V
Sbjct: 304 DFGRLTYTEAIEILQKEKERFEFPVEWGADLQTEHERFLTEQIFKKPVFV 353



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 26/139 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  +++D+P        K I      F M          +D  ++ A   DL+  G  EI
Sbjct: 349 KPVFVVDYP--------KDIKA----FYMR-------LNDDQKTVAAM--DLLVPGVGEI 387

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    + + +  + +G+ K      +       + G   H G   G +R++M L 
Sbjct: 388 IGGSQREERLDYLEKRMAELGLHK----EDYSWYLDLRKYGGTRHAGYGLGFERVIMYLT 443

Query: 552 GAKNVREVSLFPMSQNFCD 570
           G  N+R+V  FP +    D
Sbjct: 444 GISNIRDVVAFPRTVKNAD 462


>gi|302538179|ref|ZP_07290521.1| lysyl-tRNA synthetase [Streptomyces sp. C]
 gi|302447074|gb|EFL18890.1| lysyl-tRNA synthetase [Streptomyces sp. C]
          Length = 1100

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 18/265 (6%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTH+   L  +          G  V L+G V  VR  GG++F  +RD  G  Q++   D 
Sbjct: 637 RTHTAAALRAAHPGRTPGARTGERVTLAGRVMVVRDLGGVVFAVLRDWTGDAQLMFTRDE 696

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           +  ++  +  S+      G  +  + E   +   +G+  +     ++       PLP   
Sbjct: 697 SGPDVLDAFTSQ---VDFGDHVVATGEVGASR--SGEPSVVVGSWQLTGKCLR-PLPDKR 750

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R+LDL         +  R+  + ++R  ++   ++E  TP+L      
Sbjct: 751 KGLADPEARVRRRYLDLVASPDARDVVRARSSAVQALRQGLLDRGYLEVETPMLQQIHGG 810

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F           Y L  AP+ Y + L   G ++ F++   FR+E       P EF
Sbjct: 811 ANARPFRTHINAYDLDLY-LRIAPELYLKRLCVGGMEKVFEMGRTFRNEGVSYKHNP-EF 868

Query: 235 YQLDMEMSFVEQDDILNTMENVLRG 259
             L+   +F + D +L+    +++G
Sbjct: 869 TMLEAYQAFADYDVMLDLTRELIQG 893



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 61/201 (30%), Gaps = 32/201 (15%)

Query: 376  AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF----CSFAADARNHIAQELGIINCNC 431
             K +    +EA+   +D    +    +  D             D    + + L  +    
Sbjct: 924  VKTMYGAISEALGEEVDADTEEQVLRVLCDRAGVPHGPDDTRGDVVLEMYERL--VEERT 981

Query: 432  FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
                +  DFP               +P T        L         A ++DLV  G E+
Sbjct: 982  KLPTFYKDFP------------TDVSPLTRQHRKDPRL---------AERWDLVAFGTEL 1020

Query: 492  ASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             +            +  +   +                  A +  MPP GG+  G+DR+V
Sbjct: 1021 GTAYSELTDPIEQRRRLTAQSLLAAGGDAEAMELDNDFLDALEYAMPPTGGLGIGVDRLV 1080

Query: 548  MLLLGAKNVREVSLFPMSQNF 568
            M L G   +RE   FP+ +  
Sbjct: 1081 MFLTGL-TIRETLPFPLVRQG 1100


>gi|332030530|gb|EGI70218.1| Lysyl-tRNA synthetase [Acromyrmex echinatior]
          Length = 651

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 111/255 (43%), Gaps = 10/255 (3%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
            ++G VH +R  G  +IF D+R      QV+AN  +  +E  +   ++      G ++  
Sbjct: 181 SVAGRVHSIRGSGAKLIFYDLRGEGVKVQVMAN--ARLYENEEKFVADTAKIKRGDIIGV 238

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLH 139
             +   A    G+  +  + I +LS      LP           RF+ R+LDL   D + 
Sbjct: 239 VGKP--AKSKKGEFSIVPRSITLLSPCL-HMLPHLYFGLKDRETRFRQRYLDLILNDKVR 295

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
           +    R +I+  +R  +    F+E  TP++   +    A+ F+          + +  AP
Sbjct: 296 QIFHIRAKIVAYVRKFLDNMGFLEVETPMMNMIAGGATAKPFITHHNELNMDLF-MRIAP 354

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++   EN++ 
Sbjct: 355 ELYHKMLVVGGIDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYMAYADYNDLMEITENMVS 413

Query: 259 GVFEEFSNGNTVSNN 273
           G+ +       +  +
Sbjct: 414 GMVKSIHGTYKIEYH 428


>gi|74196771|dbj|BAE43117.1| unnamed protein product [Mus musculus]
          Length = 559

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 70/339 (20%), Positives = 124/339 (36%), Gaps = 22/339 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + + G 
Sbjct: 136 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLSDDLCQCYNGVVLSTESSVAVYGT 195

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 196 LNLTPKG----KQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 251

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ I    R       + E +TP L  +  EG           + +F  L Q
Sbjct: 252 NMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 309

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   EF  ++ E  F+  +D+LN +E++
Sbjct: 310 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLNRLEDL 368

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 369 VCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAIEWLKEHDVKKEDG-TFYEFG 427

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           +    +  R+ +  ++       + +  K     R   D
Sbjct: 428 DDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPED 466



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +         D    ++    L+ N  EI  G +R+  SE +L+ +  
Sbjct: 450 RFPVEIKSFYMQRC------PEDPRPTESVDV-LMPNVGEIVGGSMRSWDSEEILEGYKR 502

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI        +       + G  PHGG   G++R +  +L   ++R+V L+P 
Sbjct: 503 EGIDPAP----YYWYTDQRKYGTCPHGGYGLGLERFLSWILNRYHIRDVCLYPR 552


>gi|238789294|ref|ZP_04633081.1| Asparaginyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238722626|gb|EEQ14279.1| Asparaginyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 466

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 70/424 (16%), Positives = 139/424 (32%), Gaps = 50/424 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSE 68
           G + V S V + GWV   R    GI F+ + D      + A  ++      +    + + 
Sbjct: 12  GRAAVDSEVTVRGWVRTRRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTTG 71

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G V++   E  +        E+ A  I+++   ++        + +      + 
Sbjct: 72  CSVEVTGTVVASPGEGQS-------FEIQATAIKVVGWVDDPDTYPMAAKRHSIEYLREV 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R + +      R  +  ++        +   STP++TAS  EGA +    S ++ 
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 189 --------------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q      A    + +   P FR E+  + R  
Sbjct: 185 ENLPRTDTGAIDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHL 244

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTD 289
            EF+ ++ E++F   DD+    E +L+ VF+   N       F   R+  D   R     
Sbjct: 245 AEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERVDKDAVDRLQRFV 304

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKI------------LSVNPGYEVWAIPAKGGGGN 337
             D    +   +  E  + S  +  + +                  ++   +        
Sbjct: 305 TSDFAQ-VDYTDAIEILLASGQKFENDVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI 363

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           +AF  RMNE        G       +   G    +G   +   +   +A    + +   D
Sbjct: 364 KAFYMRMNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKED 416

Query: 398 SCFF 401
             ++
Sbjct: 417 YWWY 420



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    +V+   
Sbjct: 347 EKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDAR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + +G++K      +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 407 LAEMGLNK----EDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRTPR 462


>gi|329957323|ref|ZP_08297843.1| asparagine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328523036|gb|EGF50139.1| asparagine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 467

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 59/295 (20%), Positives = 108/295 (36%), Gaps = 29/295 (9%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F
Sbjct: 1   MEKISRTKIVDLLKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLANF 60

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+ K + +   L ++G++         A       E+ A++IE+L   +        +
Sbjct: 61  DEEMLKDITTGACLSVNGVLTESVGSGQKA-------EIQAREIEVLGTCDNTYPLQ--K 111

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           + +      +   L  R +T       R  +  ++      + F    TPI+T S  EGA
Sbjct: 112 KGHSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHEFFHKKGFFYFHTPIITGSDCEGA 171

Query: 178 RDFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
                 + +N                 F+    +     Q +  L A+     +   P F
Sbjct: 172 GQMFQVTTMNLYDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F +  D ++  E  ++   +   +       FL
Sbjct: 232 RAENSNTPRHLAEFWMVEPEVAFNDIADNMDLAEEFIKFCVQWALDNCADDVKFL 286



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 53/148 (35%), Gaps = 16/148 (10%)

Query: 428 NCNCFEF--CWIMDFPFYEWNEEEKKIDFAHN----PFTMPQGGMES--LKGNDLLSIKA 479
             + FEF   W +D      +E E+ +   H       T     +++  +K ND      
Sbjct: 324 KGHKFEFPVYWGVDL----ASEHERYLVEEHFKRPVILTDYPKEIKAFYMKQNDDGKTVR 379

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
               L     EI  G  R      ++     + I  + +           + G  PH G 
Sbjct: 380 AMDVLFPKIGEIIGGSERESDYAKLMNRIEELHIPMKDMW----WYLDTRKFGTCPHSGF 435

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             G +R+++ + G  N+R+V  FP +  
Sbjct: 436 GLGFERLLLFVTGMTNIRDVIPFPRTPR 463


>gi|149411872|ref|XP_001508683.1| PREDICTED: similar to lysyl-tRNA synthetase [Ornithorhynchus
           anatinus]
          Length = 601

 Score =  184 bits (466), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 63/281 (22%), Positives = 116/281 (41%), Gaps = 25/281 (8%)

Query: 6   THSCGDLGVSDVGS-----FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP----- 54
           TH         VG       V ++G +H  R  G  +IF D+R      QV+AN      
Sbjct: 110 THFIEQYSHLQVGEHLSDVTVNVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKS 169

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           +   F I   +R   ++ + G                G++ +   +I +LS      LP 
Sbjct: 170 EEEFFHINNKLRRGDIIGVRG---------NPGKTKKGELSIIPHEIVLLSPCL-HMLPH 219

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                  +  RF+ R+LDL  +   +   + R++II  +R  +    F+E  TP++    
Sbjct: 220 LHFGLKDKETRFRQRYLDLILNDFVRQKFITRSKIITYLRSFLDELGFLEIETPMMNVIP 279

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P 
Sbjct: 280 GGAVAKPFITYHNELDMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP- 337

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           EF   +  M++ + +D++   E +L G+ +       ++ +
Sbjct: 338 EFTTCEFYMAYADYNDLMEITEKMLSGMVKHIRGSYKIAYH 378



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
            +    +++L     E+ +     +      Q F +   +K   ++           A +
Sbjct: 483 KAGLTERFELFVMKKEVCNAYTELNDPVRQRQLFEDQAKAKAAGDDEAMFIDDNFCTALE 542

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 543 YGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMK 578


>gi|219870610|ref|YP_002474985.1| asparaginyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|259511568|sp|B8F3Y5|SYN_HAEPS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|219690814|gb|ACL32037.1| asparaginyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 467

 Score =  184 bits (466), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 74/404 (18%), Positives = 135/404 (33%), Gaps = 56/404 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D       Q + N D +
Sbjct: 1   MSKFPTISEILSGKVAVGEEVAVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDLS 60

Query: 58  CF-EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
            + +    + +   + + G+++   AE          +EL A+ +E++   E+       
Sbjct: 61  NYQDEVLRLTAGCSVIVTGVIVESPAEGQA-------VELQAKSVEVVGWVEDPDTYPMA 113

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + +      +   L  R + +      R  +  ++      + F   +TP++TAS  EG
Sbjct: 114 AKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEG 173

Query: 177 ARDFLVPSRVNQG--------------SFYA---LPQAPQQYKQLLMASGFDRYFQIAPC 219
           A +    S ++                 F+          Q      A    + +   P 
Sbjct: 174 AGEMFRVSTLDLENLPRGEDGKVDFSQDFFGRESFLTVSGQLNGETYACALSKVYTFGPT 233

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------- 266
           FR E+  + R   EF+ ++ E +F    D     E++L+ VF                  
Sbjct: 234 FRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFRAVLEERKDDLKFFEKHI 293

Query: 267 --------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK 316
                    N ++++F +I Y DAI        +   P+   +   +EH        F  
Sbjct: 294 DNTVISRLENFINSDFAQIDYTDAIEVLLKSGKNFEFPVEWGIDLSSEHERFLAEEYFKS 353

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + V    +            R   D     A     PG+  I 
Sbjct: 354 PVVVKNYPKDI-----KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    EV+ +    +G++       +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEVLDKRMVEMGLNP----EDYWWYRDLRR 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+REV  FP +  
Sbjct: 427 YGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRAPR 463


>gi|157960585|ref|YP_001500619.1| lysyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189082970|sp|A8H0J7|SYK_SHEPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157845585|gb|ABV86084.1| lysyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 501

 Score =  184 bits (466), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 67/327 (20%), Positives = 141/327 (43%), Gaps = 36/327 (11%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H   D+              +G    ++G V   R      FL I+D  G  Q  A  
Sbjct: 37  RKHKAADIQAEFGHNTKEELEGMGIERSIAGRVMAKRGP----FLVIQDVSGRIQAYAGK 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     + K ++ +++    G ++  + +   +    G + ++ ++ ++L+ A   PLP 
Sbjct: 93  D-----VQKDLKEKFLGLDIGDIIGVTGQLHLSG--KGDLYVNMEEYQLLTKALR-PLPE 144

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R++DL  +   +   + R+++++++R  M+ + F+E  TP++ +  
Sbjct: 145 KFHGLTDQETRYRQRYVDLIVNEDSREAFIMRSKVVSAIRNFMVKKEFMEVETPMMHSIP 204

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F         + Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 205 GGASARPFETHHNALDIAMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNP 262

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  ++  M++ + +D+++  E +L  +  E      +            + R+   DAI
Sbjct: 263 EFTMMEFYMAYADFNDLMDLTEEMLSSIATELCGSPQLPYGEHTVDFGGPYARLSMLDAI 322

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           ++Y  D   +++ +    V +     +
Sbjct: 323 KKYNPDNATIQS-MTYEEVKDVEFMRD 348



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E ++         P       + ND       +++    G E+A+G    + +E     F
Sbjct: 376 ETQLMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVANGFSELNDAEDQDSRF 435

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K+  ++           A + G+PP  G   GIDR+VML      +R+V LFP 
Sbjct: 436 KAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFPA 495

Query: 565 SQ 566
            +
Sbjct: 496 MR 497


>gi|50424139|ref|XP_460656.1| DEHA2F06820p [Debaryomyces hansenii CBS767]
 gi|49656325|emb|CAG88988.1| DEHA2F06820p [Debaryomyces hansenii]
          Length = 593

 Score =  184 bits (466), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 58/316 (18%), Positives = 118/316 (37%), Gaps = 15/316 (4%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACF 59
            +Y+    G+  + DV   V++SG +   R  G  + F  ++ D   I  +    D    
Sbjct: 112 EKYKDLKKGE-SLKDV--EVKVSGRIMGKRESGSKLKFYVLKGDGVQIQIMAQAQDVENA 168

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E  + +           V      T  A    G++ + A  +++L+      LP      
Sbjct: 169 EEYEKMHEYLRRGDIIGVTGYPGRTSPAKGGEGEVSVFATSVQLLTPCL-HMLPTEHYGF 227

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
             +  R++ R+LDL  +   ++  K R++II+ +R  +   +F E  TP++   +     
Sbjct: 228 KDQEARYRKRYLDLIMNESTRDRFKVRSQIISFIRKFLDTRDFTEVETPMMNVIAGGATA 287

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
              V    +      +  AP+ + + L+  G DR ++I   FR+E       P EF   +
Sbjct: 288 KPFVTHHNDLNMDMFMRIAPELFLKELVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTCE 346

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              ++ +  D+++  E +   + ++ +          ++ Y            D   P  
Sbjct: 347 FYQAYADVYDLMDMTELLFSEMVKKITGDY-------KVTYHPEGPEGKALTLDFTRPWK 399

Query: 299 MHNVTEHFVHSEFRVF 314
             N+ E         F
Sbjct: 400 RVNMIEELEKVFNVTF 415



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 42/121 (34%), Gaps = 4/121 (3%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E E         F  PQ      K +        ++++     EI +     +      Q
Sbjct: 457 ELEDASINPTFIFGHPQMMSPLAKKDRDNVGLCERFEVFVATKEICNAYTELNDPFDQRQ 516

Query: 507 AFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F      K   ++           A + G+PP  G   GIDR+ M L  +  +REV LF
Sbjct: 517 RFEEQARQKAQGDDEAQMVDETFCNALEYGLPPTAGWGCGIDRLAMFLTDSNTIREVLLF 576

Query: 563 P 563
           P
Sbjct: 577 P 577


>gi|289450720|ref|YP_003475204.1| asparagine--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289185267|gb|ADC91692.1| asparagine--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 464

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 80/425 (18%), Positives = 149/425 (35%), Gaps = 58/425 (13%)

Query: 5   RTHSCGDL--GVSD-VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           +T S  D+    SD +G  V ++GW   +R      F+D+ D   +  +     +     
Sbjct: 3   KTVSIKDIFSNPSDYLGQQVTVAGWGRTIRDQKQFCFVDLADGSCLPMLQVVATTDL--- 59

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             S  SE V   +G  +  + + +NA      +E+ A  +E+  ++     P+  +R   
Sbjct: 60  --SNYSELVKAGNGAALIVTGKIVNAPQGNRPVEMQAHTVEVEGIS-PSDYPLQPKRHTV 116

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R     L  R +  +     R+    ++       NF+   TP++T S  EGA +  
Sbjct: 117 EYLR-TIAHLRPRTNLFNAAFRVRSEAAFAIHDFFHKRNFVYVHTPLITGSDCEGAGEMF 175

Query: 182 VPSRVNQGSFYALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDED 224
             + ++Q       Q    Y Q                  + A  F   +   P FR E+
Sbjct: 176 TVTTLDQKHIPFNDQGEVDYTQDFFGKHTHLTVSGQLNGEVFAQAFKNIYTFGPTFRAEN 235

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------- 271
             + R   EF+ ++ E++F + +D++   +++L+ +                        
Sbjct: 236 SYTPRHAAEFWMIEPELAFADLNDMMGVAKDMLQHIITHILKNCPNEIEFFNKFIDKGIK 295

Query: 272 --------NNFLRICYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVN 321
                    +F  + Y DAI      K D + P+    ++ TEH  +   ++F K     
Sbjct: 296 DRLEHVATADFAHVTYTDAIELLKQAKQDFKYPVYWGVDLQTEHERYLTEQLFKK----- 350

Query: 322 PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNI 381
           P +             R   D     A     PG+  I   +  S     +  + K L  
Sbjct: 351 PVFVTDYPKEIKAFYMRLNDDNKTVAAVDCLVPGIGEI---IGGSQREERLDYLTKRLAE 407

Query: 382 VNTEA 386
            N   
Sbjct: 408 NNLPQ 412



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 24/138 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P     +E K        F M          +D  ++ A    LV    EI 
Sbjct: 350 KPVFVTDYP-----KEIK-------AFYMR-------LNDDNKTVAAVDC-LVPGIGEII 389

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + + +  +   +     +  +       + G   H G   G +R++M L G
Sbjct: 390 GGSQREERLDYLTKRLAENNLP----QEEYWWYLELRKYGSTRHAGYGLGFERLIMYLTG 445

Query: 553 AKNVREVSLFPMSQNFCD 570
             N+R+V  FP +    +
Sbjct: 446 ISNIRDVLPFPRTTGSAE 463


>gi|255712337|ref|XP_002552451.1| KLTH0C05192p [Lachancea thermotolerans]
 gi|238933830|emb|CAR22013.1| KLTH0C05192p [Lachancea thermotolerans]
          Length = 591

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 107/262 (40%), Gaps = 13/262 (4%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIA-----KSVRSEWVLC 72
             V ++G VH  R  G  + F  +       Q+++       E +       ++   ++ 
Sbjct: 123 EKVSIAGRVHAKRESGSKLKFYVLHGEGVEVQLMSQLQDYHSEASYEADHDLIKRGDIVG 182

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           ++G V      T       G+I +   +I++L+      LP        +  R++ R+LD
Sbjct: 183 VEGYV----GRTQPKKGGEGEISVFVSRIQLLTPCL-HILPADHFGFKDQETRYRKRYLD 237

Query: 133 LRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           L  +   +   + R++II+ +R  +   NFIE  TP++   +        V    +    
Sbjct: 238 LIMNKDARPRFITRSKIISFIRRFLDERNFIEVETPMMNVIAGGATAKPFVTHHNDLNMD 297

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +  AP+ + + L+  G +R ++I   FR+E       P EF   +   ++ +  D+++
Sbjct: 298 MFMRIAPELFLKELVVGGMERVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMD 356

Query: 252 TMENVLRGVFEEFSNGNTVSNN 273
             E +   + +E +    +  +
Sbjct: 357 MTEMLFSEMVKEITGSYVIKYH 378



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 44/121 (36%), Gaps = 4/121 (3%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E E         F  PQ      K +  +     ++++     EI +     +       
Sbjct: 455 ELEDTCINPTFIFGHPQMMSPLAKKSRDVPGLCERFEVFVATKEICNAYTELNDPFDQRA 514

Query: 507 AFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F      K+  ++           A + G+PP GG   GIDR+ M L  +  +REV LF
Sbjct: 515 RFEEQARQKDQGDDEAQLIDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLF 574

Query: 563 P 563
           P
Sbjct: 575 P 575


>gi|196013129|ref|XP_002116426.1| hypothetical protein TRIADDRAFT_38262 [Trichoplax adhaerens]
 gi|190581017|gb|EDV21096.1| hypothetical protein TRIADDRAFT_38262 [Trichoplax adhaerens]
          Length = 549

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 69/339 (20%), Positives = 127/339 (37%), Gaps = 22/339 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            S     V++ GWVHR+R  G  +IF+ +RD  G  Q V N        A ++ +E+ + 
Sbjct: 122 TSHRQKRVKIYGWVHRLRRQGKNLIFVLLRDGTGYIQCVFNDKLCHTYDALTLTTEYSIA 181

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G++              G  EL     E++  A           +    ++  YR + 
Sbjct: 182 VYGIIEPLPEG----KTAPGGHELIVDFWEVVGSAPPGGHDSLVNEDSNVDVQLDYRHMM 237

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR DTL K +  R+    +         + + + P L  +  EG           + +F 
Sbjct: 238 LRGDTLSKIMKIRSITEKAFNDHFYDRGYFKLTPPTLVQTQVEGGATLFKLDYFGEQAF- 296

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y + ++ S     + IA  +R E  R+ R   E+  ++ E  FV  +D+L+ 
Sbjct: 297 -LTQSSQLYLETVLPS-MGDVYCIAQSYRAEQSRTRRHLAEYTHIEAECPFVTFEDMLDK 354

Query: 253 MENVLRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           +E+++  V E                +       F R+ Y +AI  Y  +    ++    
Sbjct: 355 IEDLVVDVAERIMQSPLREMLLEMNPDFKVPQKPFRRMDYGEAIV-YLKEHNITKDDGTF 413

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
           +   E    +  R  +  ++       +    K     R
Sbjct: 414 YEYGEDIPEAPERKMTDQINEPIMLCRFPAEIKSFYMPR 452



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R H+ E +++ +   GI        +       + G  PHGG   G+
Sbjct: 466 LMPNVGEIVGGSMRTHVLEDLMEGYKRSGIDPTP----YYWYLDQRKYGTCPHGGYGLGM 521

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  LL   ++R+V+ +P 
Sbjct: 522 ERYLTWLLNRPHIRDVTFYPR 542


>gi|108761851|ref|YP_630519.1| asparaginyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|123374663|sp|Q1DA04|SYN_MYXXD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|108465731|gb|ABF90916.1| asparaginyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 466

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 99/277 (35%), Gaps = 22/277 (7%)

Query: 16  DVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           + G+ V + GWV   R    GI F+++ D      +     ++     K +    +    
Sbjct: 15  EEGTKVEVRGWVRTRRDSKAGISFVNVSDGSTFDPIQVVAPNSLPNYEKEI----LHLTA 70

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G  +      + +       E+ A ++++L   ++        +++          L +R
Sbjct: 71  GCSVISRGTLVKSQGKGQAYEVQADEVQVLGFVDDPDTYPIQPKQHTLEFLRDVAHLRVR 130

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN------- 187
            +T       R R   ++      E F   +TPI+TAS  EGA      S ++       
Sbjct: 131 TNTFSAVTRVRHRAAQAVHRFFDEEGFFWVNTPIITASDAEGAGQMFRVSTLDAVNPPRT 190

Query: 188 -------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+   A      Q      A    + +   P FR E+  + R   EF+ +
Sbjct: 191 SDGKIDWHKDFFGKEAYLTVSGQLNAEAYALAMSKVYTFGPTFRAENSNTTRHLAEFWMI 250

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           + E++F + ++  N  E  L+ VF+   N       F
Sbjct: 251 EPEVAFADLNEDANLAERFLKHVFKAVLNDCAPDLKF 287



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 67/222 (30%), Gaps = 28/222 (12%)

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
            LA  F +      +    P  K       + +  R++        F   D  +      
Sbjct: 264 NLAERFLKHVFKAVLNDCAPDLKFFEERVQKGVIERMEKFIN--SSFERIDYTEAVEILK 321

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES--- 468
            A+              FE  W  D       E E+ +   H       M          
Sbjct: 322 KAKKKF----------EFEPEWGKDL----QTEHERYLTEEHVGRPVVVMNYPEAIKSFY 367

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           ++ ND     A   D++  G  EI  G  R    +V+ Q     G+        +     
Sbjct: 368 MRLNDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDQRIQKFGLKP----ESYQWYRD 422

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             + G  PH G   G +R+++ + G +N+R+   +P      
Sbjct: 423 LRRYGSVPHAGFGLGFERLIVYMCGLQNIRDAIPYPRVPGSA 464


>gi|242280171|ref|YP_002992300.1| asparaginyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242123065|gb|ACS80761.1| asparaginyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 463

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 102/280 (36%), Gaps = 22/280 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L   +  S + + GWV   R + G  FL++ D   +  V    D    EI   
Sbjct: 3   RTCVKDILNAENAASEILVKGWVRTKRDNKGFSFLEVNDGSCLKNVQVIIDHTP-EIEAE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +         G  +S   E + +     + E+  + IE+L  A+    P+  +R   E +
Sbjct: 62  LEKIS----TGASVSVLGELVESPGKGQKWEVRGKSIEMLGFADPETFPLQKKRHSDEFL 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R     L  R +        R+ +  ++      + F    TPI+T S  EGA +    +
Sbjct: 118 R-TIAHLRPRTNKFGAMFRIRSELSYAIHKYFRDKGFFYVHTPIITGSDCEGAGEMFRVT 176

Query: 185 RVNQ-------------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            ++                F+          Q    + A    + +   P FR E   + 
Sbjct: 177 SLDHAALSSMKKEDQAANDFFGKESHLTVSGQLDAEMYALSLGQVYTFGPTFRAEKSNTP 236

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           R   EF+ ++ E++F + +D ++  E +++ +        
Sbjct: 237 RHAAEFWMVEPEVAFADLNDNMDLGEEMVKYLINHVLEKC 276



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +   + D+P     +E K       PF M          ND     A  
Sbjct: 338 HERYLTEKHFKKPVIVYDYP-----KEIK-------PFYMRM--------NDDGKTVAAM 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    E+  G  R    +V+    +  G+     E+ +     + + G  PH G   
Sbjct: 378 DLLVPRIGELVGGSQREERLDVLESRIAETGM---ESEDYW-WYLDSRRFGSAPHAGFGM 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R++MLL G  N+R+V  FP +  
Sbjct: 434 GFERMLMLLTGVTNIRDVIPFPRTPK 459


>gi|219110245|ref|XP_002176874.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411409|gb|EEC51337.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 485

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 66/332 (19%), Positives = 131/332 (39%), Gaps = 45/332 (13%)

Query: 6   THSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH+  DL          G  D  + V ++G +   R  G + F  ++D  G+ Q+  +  
Sbjct: 16  THTSADLNKLYEHKLENGEEDESANVSVAGRIMTRRVFGKLAFFTMQDEMGMIQLQFDKG 75

Query: 56  SACFEIAKSVRSE----WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
               +  K+++       ++ + G +              G++ + A + ++L+ +  LP
Sbjct: 76  RLG-DTFKNLKDWTDGSDIIGVRGTIRRTDK---------GELTVFATEWKMLTKS-ILP 124

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           LP         + R++ R LD+  +  + +   KR  I + +R  +  + F+E  TP L 
Sbjct: 125 LPDKYHGLQDVTKRYRSRHLDMISNPGVRETFRKRALITSKLRRMLDDKGFLEIETPTLH 184

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
             S             +      L  A + + + L+  GFDR +++   FR+E   +   
Sbjct: 185 TQSGGAEAKPFETYHNSMDMQLTLRIATELHLKRLIVGGFDRVYEVGRIFRNEGISTRHN 244

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  +++  ++ + DD++N  E ++  + EE     ++               YG   
Sbjct: 245 P-EFTSVELYQAYADYDDMMNLTEELVCTIAEEVCGSLSIP--------------YGEHM 289

Query: 291 PDLRNP---IIMHN-VTEHFVHSEFRVFSKIL 318
             L  P   + MH+ V E     +F      L
Sbjct: 290 VSLERPWRRVTMHDIVKEEMPDFDFSALDSQL 321



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 4/93 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++L   G E A+            + F      K   +           +A +
Sbjct: 385 KPGLTERFELFAVGREHANAFSELTDPIDQRERFEAQAAKKAAGDEEACDVDEDFLQALE 444

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP GG+  GIDR+VMLL  + ++R+V  FP
Sbjct: 445 QGMPPTGGLGIGIDRLVMLLTNSPSIRDVIAFP 477


>gi|255011768|ref|ZP_05283894.1| asparaginyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313149606|ref|ZP_07811799.1| asparaginyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313138373|gb|EFR55733.1| asparaginyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 467

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 58/295 (19%), Positives = 108/295 (36%), Gaps = 29/295 (9%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     +   D G+ V + GWV   R    + F+ + D   I  V    D A F
Sbjct: 1   MEKISRTKIVDLIKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQVVVDLANF 60

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+ K + +   L ++G++         A       E+ A++IE+L   +        +
Sbjct: 61  NEEMLKQITTGACLSVNGVLTESVGSGQKA-------EVQAREIEVLGACDNTYPLQ--K 111

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           + +      +   L  R +T       R  +  ++      + F    TPI+T S  EGA
Sbjct: 112 KGHSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITGSDCEGA 171

Query: 178 RDFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
                 + +N                 F+    +     Q +  L A+     +   P F
Sbjct: 172 GQMFQVTTMNLYDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F E  + ++  E  ++   +   +       FL
Sbjct: 232 RAENSNTPRHLAEFWMIEPEVAFNEIQENMDLAEEFIKYCVKWALDNCADDVKFL 286



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 75/225 (33%), Gaps = 31/225 (13%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL-DMQDGDSCFFIAGDPLKFCSFAA 414
           LA  F +      +       K LN +  + +  RL  +   D       + +K    A 
Sbjct: 263 LAEEFIKYCVKWALDNCADDVKFLNDMFDKGLIERLEGVLKEDFVRLPYTEGIKILEEAV 322

Query: 415 DARNHIAQELGIINCNCFEF--CWIMDFPFYEWNEEEKKIDFAHN----PFTMPQGGMES 468
                          + FEF   W +D      +E E+ +   H       T     +++
Sbjct: 323 A------------KGHKFEFPVYWGVDL----ASEHERYLVEDHFKRPVILTDYPKEIKA 366

Query: 469 L---KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
               +  D  +++A    L     EI  G  R      ++     + I  + +       
Sbjct: 367 FYMKQNEDGKTVRAMDV-LFPKIGEIIGGSERESDYNKLMTRIEEMHIPMKDMW----WY 421

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
               + G  PH G   G +R+++ + G  N+R+V  FP +    D
Sbjct: 422 LDTRKFGTCPHSGFGLGFERLLLFVTGMSNIRDVIPFPRTPRNAD 466


>gi|331646196|ref|ZP_08347299.1| asparagine--tRNA ligase [Escherichia coli M605]
 gi|331044948|gb|EGI17075.1| asparagine--tRNA ligase [Escherichia coli M605]
          Length = 481

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 128/385 (33%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 31  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 86

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +     Q E+ A K+E++   E+        + +      +   L  R 
Sbjct: 87  CSVIVTGKVVASPGQGQQFEIQASKVEVVGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 146

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 147 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 206

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 207 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 266

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +DI    E +L+ VF+                            +  +F ++
Sbjct: 267 PEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQV 326

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 327 DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 381

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 382 YMRLNEDGKTVAAMDVLAPGIGEII 406



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      +G++K      +      
Sbjct: 385 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDVRMLEMGLNK----EDYWWYRDL 438

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 439 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 477


>gi|327403764|ref|YP_004344602.1| asparaginyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327319272|gb|AEA43764.1| Asparaginyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 483

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 59/294 (20%), Positives = 108/294 (36%), Gaps = 31/294 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
             RT     L    VG    + GWV   R +    F+ + D   I  + A  D   F+ A
Sbjct: 1   MKRTKIADLLSQPKVGERYLVKGWVRAFRSNR---FIQLNDGSTINNLQAVVDFENFDEA 57

Query: 63  --KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGER 118
             K + +   + + G+V+               IEL  ++IEI+  A  +E+   V   +
Sbjct: 58  ILKKITTAASVGLTGVVIESQGSGQA-------IELQVKEIEIIGEANPDEVQRTVMQPK 110

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           ++      +   L  R +        R  +  ++      + F    TPI+T S  EGA 
Sbjct: 111 KHSLEYLREQAHLRFRTNLFGAVFRVRHAVSYAIHQFFNDQGFYYIHTPIITGSDAEGAG 170

Query: 179 DFLVPSRVN--------------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFR 221
           +    + ++                 F+          Q +  L A    + +   P FR
Sbjct: 171 EMFRVTNLDAKNPPLNEDGSVNYTEDFFGKAVNLTVSGQLEGELAALALGQIYTFGPTFR 230

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            E+  + R   EF+ ++ E++F +  D ++  EN+L+ + +           FL
Sbjct: 231 AENSNTSRHLAEFWMIEPEVAFNDIHDNMDLAENMLKYICDYVMKNCADDLKFL 284



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 50/147 (34%), Gaps = 22/147 (14%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++         I D+P             +   F M         G +        
Sbjct: 354 HERYLVEKEFKRPVIITDYP------------ASFKAFYMRAND-----GCEPGKETVAA 396

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            D++  G  E+  G  R    EV+ +  ++ GI     E          + G  PH G  
Sbjct: 397 MDILFPGIGEMVGGSQREERLEVLQKKCADFGIH----EEDLWWYLDTRRFGSVPHAGFG 452

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G +R+VM + G  N+R+V  FP +  
Sbjct: 453 LGFERMVMFVTGMTNIRDVIPFPRTPQ 479


>gi|256090519|ref|XP_002581235.1| lysyl-tRNA synthetase [Schistosoma mansoni]
 gi|238667091|emb|CAZ37474.1| lysyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 485

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 63/275 (22%), Positives = 122/275 (44%), Gaps = 11/275 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           + +Y + S G+  + DV   V ++G VH  R  G  +IF DIR      QV+AN  S   
Sbjct: 69  IKKYSSLSSGE-HLDDV--SVSIAGRVHAKRSAGSKLIFYDIRSEDCRLQVMANIRSYKS 125

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E          +   G ++  S     + +  G++ +   +I++LS      LP      
Sbjct: 126 ET--EFHDINEIIHLGDIIGCSGSPGKSKL--GELSIIPHEIKLLSPCL-YQLPHMHYGV 180

Query: 120 YPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
             +  RF+ R+LDL   + + +  + R RIIN +R  +    F+E  TP++   +   A 
Sbjct: 181 KDKETRFRQRYLDLLMNEDVRQRFITRARIINYVRRFLDDLGFLEVETPMMNTIAGGAAA 240

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
              +    +      +  AP+ Y ++L+  G +R +++   FR+E       P EF   +
Sbjct: 241 KPFITYHNDLNMNLYMRVAPELYLKMLIIGGLNRVYELGRVFRNEGIDLTHNP-EFTSCE 299

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
             M++ + +D++   E+++ G+ +       +  +
Sbjct: 300 FYMAYADYEDLMTITEDLISGLVKHLFGSYIIKYH 334


>gi|239995056|ref|ZP_04715580.1| lysyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 522

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 67/347 (19%), Positives = 148/347 (42%), Gaps = 31/347 (8%)

Query: 5   RTHSCGDL----------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R +   +L           + + G+ V ++G +   R      F+ ++D  G  Q  A+ 
Sbjct: 37  RENYADELQAKFGEFDKETLQEQGNKVSIAGRIMAKRGP----FMLLQDMTGRIQAYADK 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D+      K++++++     G ++  + +   +    G + ++ ++ E+L+ A   PLP 
Sbjct: 93  DTQ-----KALKAKYGALDIGDIIGVAGDLHKSG--KGDLYVNMEQYELLTKALR-PLPE 144

Query: 115 FGEREYPESIRFKYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  +++ R++DL   +   K  + R++I+N +R  +   +++E  TP+L    
Sbjct: 145 KFHGLSDQETKYRQRYVDLITSEQTRKTFMIRSKIVNGIRNYLTERDYLEVETPMLQVIP 204

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P 
Sbjct: 205 GGATAKPFVTHHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP- 262

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ + +D++N  E++LR + E+    + + N       D         + D
Sbjct: 263 EFTMLEFYQAYADYNDLMNLTEDMLRTLAEDILGTSIIKNT----TKDAEGNVTSEVEYD 318

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
              P    ++ E  +   +   ++    +P   + A+ A     +  
Sbjct: 319 FGKPFDRLSMGEAILKY-WPEANEEAIRDPEANLDALKAMAKQLHIK 364



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 5/128 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   EEK I         P       + ND       +++    G E+A+G    +  E
Sbjct: 382 FEATAEEKLIQPT-FITEYPWEVSPLARRNDNNPFITDRFEFFVGGRELANGFSELNDPE 440

Query: 503 VMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F+     K+  ++          RA + G+PP  G   GIDR+ ML   +  +++
Sbjct: 441 DQAERFAKQVEEKDAGDDEAMHFDDDYIRALEYGLPPTAGEGIGIDRLAMLFTDSSTIKD 500

Query: 559 VSLFPMSQ 566
           V LFP  +
Sbjct: 501 VILFPHMK 508


>gi|188534251|ref|YP_001908048.1| asparaginyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|188029293|emb|CAO97170.1| Asparaginyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 466

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 70/388 (18%), Positives = 130/388 (33%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLC 72
           V S V + GWV   R    GI F+ + D      V A  +++     +    + +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFIAVYDGSCFNPVQAVVNNSLNNYQDEVLRLTTGCSVV 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G V+    E  +        E+ A  +E++   ++        + +      +   L 
Sbjct: 76  ITGKVVESPGEGQS-------FEIQATHVEVIGWVDDPDTYPMAAKRHSIEYLREVAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----- 187
            R + +      R  +  ++      + F   STP++TAS  EGA +    S ++     
Sbjct: 129 PRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDMENLP 188

Query: 188 ---------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+   A      Q      AS   + +   P FR E+  + R   EF+
Sbjct: 189 RTPEGKVNYDEDFFGKEAFLTVSGQLNGETYASAISKIYTFGPTFRAENSHTSRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            L+ E++F + +D     E +L+ VF+                            V+ +F
Sbjct: 249 MLEPEIAFADLEDNAALAEAMLKYVFKAVLTERADDMAFFAERVDKDAVSRLERFVTTDF 308

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            ++ Y +A+           NP+   +   +EH  +   + F   + V    +       
Sbjct: 309 AQVDYTEAVEILLASGQKFENPVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI----- 363

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 364 KAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 6/99 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    EV+    + +G++K      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEVLDARLAEMGLNK----EDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G  PH G   G +R++  + G +NVR+V  FP +    
Sbjct: 426 YGTVPHSGFGLGFERLIAYVTGVQNVRDVIAFPRTPRSA 464


>gi|118444104|ref|YP_877316.1| asparaginyl-tRNA synthetase [Clostridium novyi NT]
 gi|166231662|sp|A0PY64|SYN_CLONN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|118134560|gb|ABK61604.1| asparaginyl-tRNA synthetase [Clostridium novyi NT]
          Length = 463

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 76/432 (17%), Positives = 151/432 (34%), Gaps = 68/432 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
                G  V++SGW+  +R      F+++ D       QVV   +   F+          
Sbjct: 13  TEKFAGKEVKISGWIRTLRASNKFGFIEVNDGSFFKNIQVVFGAELENFKEISKYAISSS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G V+                E+ A+K+ +   ++    P+  +R   E +R     
Sbjct: 73  ISVEGEVVITEG-------AKQPFEIHAKKVVLEGKSDADY-PLQKKRHTFEYLR-SIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++      + F+   TPI+T S  EGA +    + ++   
Sbjct: 124 LRPRSNAFSAVFRVRSLAAYAIHKFFQDQGFVYVHTPIITGSDCEGAGEMFRVTTLDMEN 183

Query: 190 -------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+   A      Q +  + A  F   +   P FR E+  + R   E
Sbjct: 184 PPKDEKGNVDYKEDFFGKQANLTVSGQLEAEIYALAFRNVYTFGPTFRAENSNTARHASE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSN 272
           F+ ++ EM+F E  D ++  E +++ +                            N V++
Sbjct: 244 FWMIEPEMAFAELKDYMDVAEQMVKYIINYVRENAPEEMEFFNKFIDKGLLERLDNVVNS 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           +F RI Y +A+        +   P+   +   TEH  +   +++ K + V    +     
Sbjct: 304 DFARISYTEAVEILQKSGAEFEYPVEWGIDLQTEHERYLTEQIYKKPVFVTDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR 390
                  +AF  RMN+  ++     L          G    +G   +   +   EA    
Sbjct: 361 -------KAFYMRMNDDNKTVAAADLLV-------PGIGEIIGGSQREERLDILEARMAE 406

Query: 391 LDMQDGDSCFFI 402
           L ++  D  +++
Sbjct: 407 LGLEKEDYWWYL 418



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 48/134 (35%), Gaps = 24/134 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P        K I      F M          ND     A    LV    EI 
Sbjct: 349 KPVFVTDYP--------KDIKA----FYMRM--------NDDNKTVAAADLLVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +++    + +G+ K      +       + G   H G   G +R++M L G
Sbjct: 389 GGSQREERLDILEARMAELGLEK----EDYWWYLELRKYGETKHAGYGLGFERMIMYLTG 444

Query: 553 AKNVREVSLFPMSQ 566
             N+R+V  FP + 
Sbjct: 445 MGNIRDVIPFPRTP 458


>gi|148230913|ref|NP_001085490.1| aspartyl-tRNA synthetase [Xenopus laevis]
 gi|49119135|gb|AAH72839.1| MGC80207 protein [Xenopus laevis]
          Length = 530

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 88/379 (23%), Positives = 146/379 (38%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL V      V +   VH  R  G   FL +R        +  V         + A ++ 
Sbjct: 79  DLTVQIADETVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGERASKQMVKFAANIT 138

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ ++G+V  R  +    +     +EL  ++I ++S AE        +   PE    
Sbjct: 139 KESIVDVEGVV--RKVDQKIESCTQQDVELHIERIYVISAAEPRLPLQLEDAVRPETEGE 196

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R +DLR  T H     ++ I    R  +  + F+E  TP + +++
Sbjct: 197 EEGRATVNQDTRLDNRVIDLRTSTSHSVFGLQSGICQLFRETLTKKGFVEIQTPKIISAA 256

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 257 SEGGANVFTVSYFKTSAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 314

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNFL------------ 275
           F  LD+EM+F        D+I +TM  + +G+ E F +   TV   F             
Sbjct: 315 FVGLDIEMAFNYHYHEVVDEIADTMVQIFKGLQERFQTEIQTVCKQFPCEPFKFLEPTLR 374

Query: 276 -RICYDDAIRR----YGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
                  A+ R       D+ DL  P    +  + +    ++F +  K  L+V P Y + 
Sbjct: 375 LEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFYTMP 434

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 435 DPQNPKYSNSYDMFMRGEE 453



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                   +  YD+   G EI SG  R H  +++ +  ++
Sbjct: 422 KYPLAVRPFYTMPD--------PQNPKYSNSYDMFMRGEEILSGAQRVHDPQLLTERATH 473

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP       
Sbjct: 474 HGIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRDPKRLT 529

Query: 571 L 571
            
Sbjct: 530 P 530


>gi|296121103|ref|YP_003628881.1| lysyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296013443|gb|ADG66682.1| lysyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 487

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 70/339 (20%), Positives = 132/339 (38%), Gaps = 30/339 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSEWVLCID 74
           G  VR++G V R    G + F  I+D+ G  QV+ +         E+ +  ++  +L +D
Sbjct: 52  GEVVRVAGRVMRWSDSGKLRFGTIQDYTGRIQVMISKKDIAEDQWELMECFQTGDLLGVD 111

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G +   +         TG+I + A K+ +L  +     P             + R+LDL 
Sbjct: 112 GTLRRTN---------TGEISVFATKLHVLGKSLS-QPPEKWHGLQDIETLLRQRYLDLI 161

Query: 135 -RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
             D +   +++R +II+S+R  +  E F E  TP+L A +    AR F+          Y
Sbjct: 162 YNDGVLARMLRRLKIIDSIRQTLRGEEFFEVETPVLHAIAGGAAARPFITHHNALDIPLY 221

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + + + LM  G +R ++I   FR+E   +   P EF  +++  ++ + + ++  
Sbjct: 222 -LRIALELHLKRLMVGGIERVYEIGRVFRNEGVDATHNP-EFTMIELYQAYADYNIMMEL 279

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            E ++    +  ++G T             +  +G    D   P       + F+     
Sbjct: 280 AEKIISEACKAANDGKT-------------VVEWGDKTLDFTPPFQRAKYGDLFLKHAGC 326

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
                 +V        IP +G   +    D         
Sbjct: 327 DMHDAAAVAEVARKLHIPTEGRHHDVIVNDVFEATVEDH 365



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 12/156 (7%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE---EKKIDFAHNPFTMPQGGMESLK 470
           A A   +A++L I          + D   +E   E   E  +     P +M         
Sbjct: 331 AAAVAEVARKLHIPTEGRHHDVIVND--VFEATVEDHLEGPVFVIDYPSSMCPLTKRKNG 388

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGISKEVVENRFGG-LYR 527
             +     A +++L  +G E+A+     +   +          G+++E    +      R
Sbjct: 389 QPE----IAERFELFIHGLELANAYTELNDPRLQEDLFKTQLAGLAEEDSMAKMDHDFVR 444

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMP  GG+  GIDR+VMLL   K +R+V  FP
Sbjct: 445 ALKVGMPCAGGMGIGIDRLVMLLTNTKTIRDVIFFP 480


>gi|150951370|ref|XP_001387684.2| lysyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149388537|gb|EAZ63661.2| lysyl-tRNA synthetase [Pichia stipitis CBS 6054]
          Length = 593

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 59/316 (18%), Positives = 121/316 (38%), Gaps = 15/316 (4%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACF 59
            +Y + + G+  + DV   V+++G +   R  G  + F  ++ D   +  +    D A  
Sbjct: 112 EKYSSLTRGE-TLQDV--EVKVTGRIMTKRESGAKLRFYVLKGDGVEVQIMAQAQDVASA 168

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E  + +           V      T  A    G++ + A  +++L+      LP      
Sbjct: 169 EEYEKMHEYLRRGDVIGVTGYPGRTAPAKGGDGEVSVFATSVQLLTPCL-HMLPTEHFGF 227

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
             +  R++ R+LDL  +   ++  K R++II  +R  +   +F+E  TPIL   +     
Sbjct: 228 KDQEARYRKRYLDLIMNDATRDRFKVRSKIIGYIRKFLDNRDFVEVETPILNVIAGGATA 287

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
              +    +      +  AP+ + + L+  G DR ++I   FR+E       P EF   +
Sbjct: 288 KPFITHHNDLSMDMFMRIAPELFLKELVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTCE 346

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              ++ +  D+++  E +   + +E +          ++ Y     +      D   P  
Sbjct: 347 FYQAYADVYDLMDMTELMFSEMVKEITGDY-------KVTYHPDGPQGEALTLDFSRPWK 399

Query: 299 MHNVTEHFVHSEFRVF 314
             N+ E         F
Sbjct: 400 RVNMIEELEKVYNVKF 415



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 4/121 (3%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E E         F  PQ      K +  +     ++++     EI +     +      Q
Sbjct: 457 ELEDASINPTFIFGHPQMMSPLAKKDRNIPGLCERFEVFVATKEICNAYTELNDPFDQRQ 516

Query: 507 AFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F      K   ++           A + G+PP  G   GIDR+ M L  +  +REV LF
Sbjct: 517 RFEEQARQKAQGDDEAQLVDEVFCNALEYGLPPTAGWGCGIDRLAMFLTDSNTIREVLLF 576

Query: 563 P 563
           P
Sbjct: 577 P 577


>gi|148679579|gb|EDL11526.1| mCG141545, isoform CRA_c [Mus musculus]
          Length = 632

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 62/287 (21%), Positives = 118/287 (41%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 162 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFVHINNKLRRGDIIGV 219

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E        G++ +  Q+I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 220 --EGNPGKTKKGELSIIPQEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 276

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 277 QKFIVRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 335

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E +L 
Sbjct: 336 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMLS 394

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          +I Y          + D   P    ++ E 
Sbjct: 395 GMVKSITGSY-------KITYHPDGPEGQAYEVDFTPPFRRISMVEE 434



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 514 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 573

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 574 YGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMK 609


>gi|307249880|ref|ZP_07531854.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858069|gb|EFM90151.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 467

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 75/404 (18%), Positives = 133/404 (32%), Gaps = 56/404 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D       Q + N D A
Sbjct: 1   MSKFPTVSEILSGKVAVGEEVAVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQSIINNDLA 60

Query: 58  CF-EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
            + +    + +   + + G V+   AE          +EL A  +E++   E+       
Sbjct: 61  NYNDEVLRLTAGCSVIVTGKVVESPAEGQA-------VELHATHVEVVGWVEDPDTYPMA 113

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + +      +   L  R + +      R  +  ++      + F   +TP++TAS  EG
Sbjct: 114 AKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEG 173

Query: 177 ARDFLVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPC 219
           A +    S ++                 F+          Q      A    + +   P 
Sbjct: 174 AGEMFRVSTLDLENLPRTDEGKVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGPT 233

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------- 266
           FR E+  + R   EF+ ++ E +F    D     E++L+ VF+                 
Sbjct: 234 FRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKHI 293

Query: 267 --------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK 316
                    N +++ F ++ Y DAI        +   P+   +   +EH        F  
Sbjct: 294 DKDVITRLENFIASPFAQVDYTDAIEILLKSGKEFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + V    +            R   D     A     PG+  I 
Sbjct: 354 PVVVKNYPKDI-----KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 70/216 (32%), Gaps = 27/216 (12%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y+F  + E          AKH++            +++  +  F   D          
Sbjct: 271 LKYVFKAVLEERKDDMQF-FAKHIDKDVI------TRLENFIASPFAQVDYTDAIEIL-- 321

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEW---NEEEKKIDFAHNPFTMPQGGMESLKGN 472
                 +E        F   W +D          EE  K       +            +
Sbjct: 322 --LKSGKEF------EFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDIKAFYMRLND 373

Query: 473 DLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           D  ++ A   D++  G  EI  G  R    +V+      +G++       +       + 
Sbjct: 374 DGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDTRMVEMGLNP----EDYWWYRDLRKY 427

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G  PH G   G +R+++ + G +N+REV  FP +  
Sbjct: 428 GTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRAPR 463


>gi|291087320|ref|ZP_06346111.2| asparagine--tRNA ligase [Clostridium sp. M62/1]
 gi|291075369|gb|EFE12733.1| asparagine--tRNA ligase [Clostridium sp. M62/1]
          Length = 550

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 123/376 (32%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +G  +R+ GWV  VR      F+ + D       QVV + +   F     +     
Sbjct: 100 REKFLGKEIRIGGWVRSVRDSKTFGFIVVSDGSYFETLQVVYHDNMENFSEISKLNVGAA 159

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A ++ +   +         ++ +          
Sbjct: 160 ILVKGTLVATPE-------AKQPFEIQATEVLVEGASSPDYPLQ--KKRHSLEYLRTISH 210

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-- 188
           L  R +T       R+ I  ++       +F+   TP++T S  EGA +    + ++   
Sbjct: 211 LRPRTNTFQAVFRVRSLIAYAIHQYFQERDFVYVHTPLITGSDCEGAGEMFQVTTMDLAN 270

Query: 189 ------------GSFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+  P       Q      A  F   +   P FR E+  + R   E
Sbjct: 271 VPKASDGSVDFSQDFFGKPTNLTVSGQLNAETYAMAFRNVYTFGPTFRAENSNTTRHAAE 330

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ EM+F + +D +   E++L+ V            NF                   
Sbjct: 331 FWMIEPEMAFADLNDNMALAESMLKYVIRYVLEHAPEEMNFFNQFIDKGLLDRLNHVLNS 390

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
               + Y +A++       +    +       TEH  +   ++F + + V    +     
Sbjct: 391 EFGHVTYTEAVKLLEEHNDEFDYKVFWGCDLQTEHERYLTEQIFKRPVFVTDYPKEI--- 447

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  +MNE
Sbjct: 448 -------KAFYMKMNE 456



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 49/139 (35%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K        F M                 A    LV    EI 
Sbjct: 436 RPVFVTDYP-----KEIK-------AFYMKMNED--------GKTVAAMDCLVPGIGEII 475

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    E +L     +G+ K      +G      + G   H G   G +R VM L G
Sbjct: 476 GGSQREDDYEKLLARMDELGLKK----EDYGFYLDLRKYGSVRHSGFGLGFERCVMYLTG 531

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N C+L
Sbjct: 532 MGNIRDVIPFPRTVNNCEL 550


>gi|168334959|ref|ZP_02693077.1| asparaginyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 461

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 65/371 (17%), Positives = 124/371 (33%), Gaps = 54/371 (14%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             V ++GW+  VR      F+D+ D       QVV +     F+    +     + + G 
Sbjct: 17  KEVEVAGWIRSVRDSKTFGFIDLNDGTFFKGVQVVFDDTMPNFKEIAKLGVGASIIVKGS 76

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V+    +           E+ A  I I         P+  +R   E +R +  +L  R +
Sbjct: 77  VVLTPDQKQP-------FEIKASAITIEGEC-PPDYPLQKKRHSFEFLR-EIAYLRPRTN 127

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV---------- 186
           T       R+ +  ++       +F+   TPI+TA+  EGA +    + +          
Sbjct: 128 TFAAVFRVRSLVAYAIHKFFQDRHFVYVHTPIITANDCEGAGEMFRVTTLSATEPKLLKN 187

Query: 187 ----NQGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+    +     Q      A  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 188 GEVDFSEDFFGKMASLTVSGQLSAETFALAFRDVYTFGPTFRAENSNTPRHAAEFWMIEP 247

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RIC 278
           E++F + +D ++  E++L+ V +   +       F                      ++ 
Sbjct: 248 EIAFADLEDNMHLAEDMLKFVIQYVLDNAPEEMAFFNSFVDKGIKDRLISILKSNFGQVT 307

Query: 279 YDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSV---NPGYEVWAIPAKG 333
           Y DAI             +       TEH  +   + F K + V       + + +    
Sbjct: 308 YTDAIDILQKSGQKFEYKVEWGVDLQTEHERYLTEKHFKKPVFVIDYPKDIKAFYMRLNA 367

Query: 334 GGGNRAFCDRM 344
                A  D +
Sbjct: 368 DNKTVAAMDLL 378



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 54/150 (36%), Gaps = 26/150 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  +++D+P        K I      F M           D  ++ A  
Sbjct: 336 HERYLTEKHFKKPVFVIDYP--------KDIKA----FYMR-------LNADNKTVAAM- 375

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  E+  G  R    +V+        ++    E  +       + G   H G  
Sbjct: 376 -DLLVPGVGELIGGSQREERLDVLKLRMKECHLN----EEDYFWYLNLRKFGGTRHSGFG 430

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R+VM L G  N+R+V  +P +    +
Sbjct: 431 LGFERLVMYLTGMTNIRDVIPYPRTTGSAE 460


>gi|255523993|ref|ZP_05390955.1| asparaginyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296186852|ref|ZP_06855253.1| asparaginyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255512280|gb|EET88558.1| asparaginyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048566|gb|EFG87999.1| asparaginyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 463

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 69/384 (17%), Positives = 126/384 (32%), Gaps = 56/384 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
              V++SGWV  VR      F++I D       QVV +     F+    +     L ++G
Sbjct: 18  NKPVKISGWVRTVRDSKSFGFIEINDGSFFKNIQVVFDDSLENFKDVTKLAISSSLSVEG 77

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++                E+ A KI +   +         ++ +          L  R 
Sbjct: 78  TIVLTPGSKQP-------FEMKATKITVEGKSSSDYPLQ--KKRHSLEYLRTIAHLRPRS 128

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           +T       R+    ++      + F+  +TP++T S  EGA +    + ++        
Sbjct: 129 NTFSAVFRVRSVAAFAVHKFFQEKGFVYANTPLITGSDCEGAGEMFRLTTLDLENVPKDE 188

Query: 190 --------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 NGKVDYSKDFFGKETNLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHAAEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            EM+F E  D ++  E++++ + +           F                      RI
Sbjct: 249 PEMAFAELKDYMDIAEDLVKYIIKYVLANAPEEMEFFNSFIDKGLFDRLDNVANSDFGRI 308

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y +A+        + + P+   +   TEH  +   +VF K + V    +          
Sbjct: 309 SYTEAVDILKKSGHEFQYPVEWGIDLQTEHERYLTEKVFKKPIFVTDYPKDI-----KAF 363

Query: 336 GNRAFCDRMNEWARSQGQPGLAYI 359
             RA  D     A     PG+  I
Sbjct: 364 YMRANEDGKTVAAADLLVPGVGEI 387



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 50/149 (33%), Gaps = 24/149 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +  ++ D+P        K I      F M                 A  
Sbjct: 338 HERYLTEKVFKKPIFVTDYP--------KDIKA----FYMRANED--------GKTVAAA 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    +++ +    +G+SK      +       + G   H G   
Sbjct: 378 DLLVPGVGEIVGGSQREERLDILEKRIDEMGLSK----EDYWWYLELRKYGETKHSGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G +RI+M + G  N+R+V  FP +    +
Sbjct: 434 GFERILMYITGMSNIRDVIPFPRTTGSAE 462


>gi|254480185|ref|ZP_05093433.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214039747|gb|EEB80406.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 497

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 26/290 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +L  +D      ++G + R R      FL I+D     Q+  N      E    ++S  +
Sbjct: 58  ELETAD--KHFSVAGRLIRNRGS----FLLIQDGSDQIQLYVNRKGLDEETLAEIKSWDL 111

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               G +++ S     +    G + ++ ++  +L+ A   PLP        + +R++ R+
Sbjct: 112 ----GDIVAASGPLHKSG--KGDLYINMEQARLLTKALR-PLPDKYHGLSDQEMRYRQRY 164

Query: 131 LDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           +DL  +   + + + R+RII  +R  M+   F+E  TP++        A+ F+       
Sbjct: 165 VDLIVNEESRKVFRTRSRIIAFIRDYMMERGFMEVETPMMQVIPGGAAAKPFVTHHNALD 224

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  AP+ Y + L   GF+R F+I   FR+E   +   P EF  L+   ++   +D
Sbjct: 225 QDMY-LRIAPELYLKRLTVGGFERVFEINRSFRNEGLSTRHNP-EFTMLEYYWAYGAFED 282

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTD 289
            ++  E++LR + +E     TV            F+R+   DAI +Y  D
Sbjct: 283 AMDLTEDMLRKLTQEVIGSTTVEYQGGSYDFSQPFVRLSVFDAILQYNAD 332



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 7/157 (4%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
             AR+ IA+ LGI     +    +     +E   E   +D        P       + ND
Sbjct: 342 GKARD-IAKGLGIALKESWGLGKV-QIEIFEKTVE-HLLDQPTFITRYPTEVSPLSRRND 398

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAF 529
                  +++    G E+A+G    +  E   + F      K+  ++          RA 
Sbjct: 399 DDPFVTDRFEFFIGGRELANGFSELNDPEDQAERFLAQVAEKDAGDDEAMHYDADYIRAL 458

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + G+PP  G   GIDR+VM L  + ++R+V LFP  +
Sbjct: 459 EYGLPPTVGEGIGIDRLVMFLTDSASIRDVLLFPHMR 495


>gi|322832253|ref|YP_004212280.1| asparaginyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321167454|gb|ADW73153.1| asparaginyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 466

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 71/392 (18%), Positives = 135/392 (34%), Gaps = 56/392 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSE 68
           G + V S V + GWV   R    GI F+ + D      + A  +++     E    + + 
Sbjct: 12  GRAAVDSEVTVRGWVRTRRDSKAGISFVAVYDGSCFNPLQAVINNSLPNYQEDVLRLTTG 71

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G+V++   E  +        EL A  + ++   ++        + +      + 
Sbjct: 72  CSVEVTGIVVASPGEGQS-------FELQATTVNVVGWVDDPDTYPMAAKRHSIEYLREV 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R + +      R  +  ++        +   STP++TAS  EGA +    S ++ 
Sbjct: 125 AHLRPRTNLIGAVARVRNTLSQAIHRFYHENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 189 --------------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q      A    + +   P FR E+  + R  
Sbjct: 185 QNLPRTDKGEIDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHL 244

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTV 270
            EF+ ++ E++F   DDI    EN+L+ VF+   +                        V
Sbjct: 245 AEFWMVEPEVAFATLDDIAALAENMLKYVFKAVLDERADDMAFFADRVDKDAVARLERFV 304

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWA 328
           +++F ++ Y DA+           NP+    ++ +EH  +   + F   + V    +   
Sbjct: 305 TSDFAQVDYTDAVEILMNCDQKFENPVSWGVDLSSEHERYLAEQHFKAPVVVKNYPKDI- 363

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                    R   D     A     PG+  I 
Sbjct: 364 ----KAFYMRMNDDGKTVAAMDVLAPGIGEII 391



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 6/99 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+    + +G++K      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G  PH G   G +R+V  + G +NVR+V  FP +    
Sbjct: 426 YGTVPHSGFGLGFERLVAYVTGVQNVRDVIPFPRTPRSA 464


>gi|111114923|ref|YP_709541.1| asparaginyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123047068|sp|Q0SP63|SYN_BORAP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|110890197|gb|ABH01365.1| asparaginyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 462

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 74/379 (19%), Positives = 138/379 (36%), Gaps = 51/379 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEI--AKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F+    K++ +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFDEKDLKNLTTGASIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N  I T           ++  A+    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQNYEIKTCG-------FNVIGEADPKTYPLQKKRHTFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------ 186
           +R +T       R++I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAVARVRSKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKPN 185

Query: 187 -------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NDLGNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR-------------------- 276
           ++ EM+F + +D +   E++L+ +     N  +   +FL                     
Sbjct: 246 IEPEMAFYKLNDNITLAEDLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFE 305

Query: 277 -ICYDDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
            I Y  AI    + K +    P    ++ TEH        F K + V    + +      
Sbjct: 306 VITYTKAIEILESSKKNFEIKPYWGIDLQTEHERFLTEETFKKPVVVIDYPKNFKAFYMK 365

Query: 334 GGGNRAFCDRMNEWARSQG 352
              +      M+      G
Sbjct: 366 INKDNKTVKGMDVLVPKIG 384



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 29/84 (34%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    E  LQ   N      +            + G  PH G   G+
Sbjct: 379 LVPKIGEIIGGSER----EDNLQKLENRIKELNLSIEHLNWYLDLRRFGSTPHSGFGLGL 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R V    G  N+R+   FP +  
Sbjct: 435 ERFVQYSTGISNIRDSIPFPRTPK 458


>gi|327481445|gb|AEA84755.1| lysyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 500

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 71/367 (19%), Positives = 138/367 (37%), Gaps = 46/367 (12%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   +  +L  + +   V+++G +   R      F+ ++D  G  QV  +      E 
Sbjct: 51  KQYAEKTKEELEAAAI--PVKVAGRIMLNRGP----FMVLQDMSGRIQVYVDRKMLPAEQ 104

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            ++V+   +  I       +AE   A    G + +    + +L+ +   PLP        
Sbjct: 105 VEAVKHFDLGDI------IAAEGTLARSGKGDLYVYMNNVRLLTKSLR-PLPDKFHGLTD 157

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
              R++ R++DL  +   +   + R+++I  +R  +   +F+E  TP+L T      A+ 
Sbjct: 158 TEQRYRQRYVDLMVNEEVRETFRVRSKVIAHIRKFLAERDFLEVETPMLQTIPGGAAAKP 217

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  L+ 
Sbjct: 218 FETHHNALDMPMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMLEF 275

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++ + +D ++  E + R + +       V               YG        P   
Sbjct: 276 YQAYADYEDNMDLTEELFRELAQAVLGSTDVP--------------YGDKVFHFGEPFAR 321

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            +V +  +     +      +N   +  AI  K G             A+  G  GL  +
Sbjct: 322 LSVFDSILKFNPEI--SAADLNDLEKARAIAKKAG-------------AKLLGHEGLGKL 366

Query: 360 FWRLDES 366
              + E 
Sbjct: 367 QVMIFEE 373



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 78/202 (38%), Gaps = 30/202 (14%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           ++    + K    ++   +    D++   +    AG  L         +  I +EL  + 
Sbjct: 322 LSVFDSILKFNPEISAADLN---DLEKARAIAKKAGAKLLGHEGLGKLQVMIFEEL--VE 376

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
               +  +I ++P +E +   ++                    ND       +++L   G
Sbjct: 377 HKLEQPTFITEYP-FEVSPLARR--------------------NDRNPNVTDRFELFIGG 415

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EIA+     + +E   + F      K+  ++          RA + GMPP  G   GID
Sbjct: 416 REIANAYSELNDAEDQAERFHAQVADKDAGDDEAMHFDADFVRALEYGMPPTAGEGIGID 475

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VMLL  + ++R+V LFP  +
Sbjct: 476 RLVMLLTNSPSIRDVILFPHMR 497


>gi|303250422|ref|ZP_07336620.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307252225|ref|ZP_07534122.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307256694|ref|ZP_07538473.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|302650748|gb|EFL80906.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860147|gb|EFM92163.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306864742|gb|EFM96646.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 467

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 75/404 (18%), Positives = 133/404 (32%), Gaps = 56/404 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D       Q + N D A
Sbjct: 1   MSKFPTVSEILSGKVAVGEEVAVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQSIINNDLA 60

Query: 58  CF-EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
            + +    + +   + + G V+   AE          +EL A  +E++   E+       
Sbjct: 61  NYNDEVLRLTAGCSVIVTGKVVESPAEGQA-------VELHATHVEVVGWVEDPDTYPMA 113

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + +      +   L  R + +      R  +  ++      + F   +TP++TAS  EG
Sbjct: 114 AKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEG 173

Query: 177 ARDFLVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPC 219
           A +    S ++                 F+          Q      A    + +   P 
Sbjct: 174 AGEMFRVSTLDLENLPRTEEGKVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGPT 233

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------- 266
           FR E+  + R   EF+ ++ E +F    D     E++L+ VF+                 
Sbjct: 234 FRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKHI 293

Query: 267 --------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK 316
                    N +++ F ++ Y DAI        +   P+   +   +EH        F  
Sbjct: 294 DKDVITRLENFIASPFAQVDYTDAIEILLKSGKEFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + V    +            R   D     A     PG+  I 
Sbjct: 354 PVVVKNYPKDI-----KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 70/216 (32%), Gaps = 27/216 (12%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y+F  + E          AKH++            +++  +  F   D          
Sbjct: 271 LKYVFKAVLEERKDDMQF-FAKHIDKDVI------TRLENFIASPFAQVDYTDAIEIL-- 321

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEW---NEEEKKIDFAHNPFTMPQGGMESLKGN 472
                 +E        F   W +D          EE  K       +            +
Sbjct: 322 --LKSGKEF------EFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDIKAFYMRLND 373

Query: 473 DLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           D  ++ A   D++  G  EI  G  R    +V+      +G++       +       + 
Sbjct: 374 DGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMVEMGLNP----EDYWWYRDLRKY 427

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G  PH G   G +R+++ + G +N+REV  FP +  
Sbjct: 428 GTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRAPR 463


>gi|149910091|ref|ZP_01898738.1| asparaginyl-tRNA synthetase [Moritella sp. PE36]
 gi|149806816|gb|EDM66778.1| asparaginyl-tRNA synthetase [Moritella sp. PE36]
          Length = 466

 Score =  183 bits (465), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 72/412 (17%), Positives = 136/412 (33%), Gaps = 34/412 (8%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACF-EIAKSVRSEWVLC 72
           VGS V   GW+   R    GI FL + D       Q V + D   + +   S+ +   + 
Sbjct: 16  VGSTVTTKGWIRTRRDSKAGISFLAVYDGSCFDPIQAVVSKDLPNYSDDVLSLTAGCSVE 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G V+    +           E+ A ++ +L + E+        + +      ++  L 
Sbjct: 76  ITGTVVESPGKGQA-------FEIQATEVIVLGLVEDPDTYPMSAKRHSIEYLREHAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +   +  R  +  ++        +   STPI+TAS  EGA +    S ++     
Sbjct: 129 GRTNVMGAVMRVRNCLSQAIHRFYHENGYNWLSTPIITASDCEGAGEMFRVSTLDMNNLP 188

Query: 190 -----------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+   A      Q      A    + +   P FR E+  + R   EF+
Sbjct: 189 LTDKGEVDYNQDFFGKEAFLTVSGQLNAETYACAIGKVYTFGPTFRAENSNTTRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGT---DK 290
            ++ E++F + DD     E++L+  F+           F   RI  D   R       D 
Sbjct: 249 MVEPEIAFADLDDAAKLAEDMLKYCFKAVLEERMDDMQFFAQRIDKDAITRLESFVDSDF 308

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA-IPAKGGGGNRAFCDRMNEWAR 349
             +     +  + E     EF V   I   +      A +  K     + +   +  +  
Sbjct: 309 AQIDYTDAIKILEECGKEFEFPVSWGIDMSSEHERYLAEVHFKAPVVVKNYPKDIKSFYM 368

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
                G       +   G    +G   +   +   +     + +   D  ++
Sbjct: 369 RMNDDGKTVAAMDVLAPGIGEIIGGSQREERLDMLDKRMEEMGLNKEDYWWY 420



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +++ +    +G++K      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDMLDKRMEEMGLNK----EDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+V  + G +N+R+V  +P +  
Sbjct: 426 FGTVPHSGFGLGFERLVSYVTGMQNIRDVIPYPRAPR 462


>gi|254446739|ref|ZP_05060214.1| asparaginyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198256164|gb|EDY80473.1| asparaginyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 461

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 67/355 (18%), Positives = 127/355 (35%), Gaps = 52/355 (14%)

Query: 9   CGDLGVSDVG-SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSV 65
             DL  S+ G   V + GWV   R      FL+I D   +  +    N D+A +  +K +
Sbjct: 6   IADLMKSETGLDSVVIQGWVRTRRDSKTFFFLEINDGSCLKSMQAVVNEDAAGYADSKGI 65

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   + + G +++   +         + E+ A  +E++  A+E   P+  +R   E +R
Sbjct: 66  ATGASVTVKGRLVASQGKG-------QKWEIQADSVELVGSADE-TFPLQKKRHSNEYLR 117

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            +   L  R +        R+++  ++        F    TPI+TAS  EGA +    S 
Sbjct: 118 -EIAHLRPRTNFYGAVFRIRSKLAFAIHRFFNDRQFFYVHTPIVTASDCEGAGELFRVST 176

Query: 186 VNQG--------------SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           ++                 F+          Q +    AS     +   P FR E+  + 
Sbjct: 177 LDPKNPPLGEGGEIDSSKDFFGRSTYLTVSGQLEGETYASALGNIYTFGPTFRAENSNTS 236

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS----------------- 271
           R   EF+ ++ EM+F +    ++  E  ++ V +E                         
Sbjct: 237 RHASEFWMIEPEMAFCDLAADMDLAEEFVKSVIKEVMESCADDLELFFNFIDKELRQRLE 296

Query: 272 ----NNFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSV 320
                 F R+ Y +A+           N +    +  +EH  +     F   ++V
Sbjct: 297 FVLSRPFQRVTYTEAVEILQACGKKFENKVEWGVNLQSEHERYLTEEHFKSPVTV 351



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 53/143 (37%), Gaps = 24/143 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +      + D+P     +E K       PF M        + ND     A  
Sbjct: 336 HERYLTEEHFKSPVTVYDYP-----KELK-------PFYM--------RANDDGKTVAAM 375

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    E++L+     GIS++             + G  PH G   
Sbjct: 376 DVLVPGIGEIVGGSQREERLELLLENMKKHGISEKDYW----WYVDLRRYGSMPHAGFGL 431

Query: 542 GIDRIVMLLLGAKNVREVSLFPM 564
           G +R++M + G  N+R+V  +P 
Sbjct: 432 GFERLLMFITGVGNIRDVIPYPR 454


>gi|50311751|ref|XP_455904.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49645040|emb|CAG98612.1| KLLA0F18392p [Kluyveromyces lactis]
          Length = 588

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 112/262 (42%), Gaps = 13/262 (4%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA-----NPDSACFEIAKSVRSEWVLC 72
             V ++G +H  R  G  + F  +       QV++     + +S+  +    ++   ++ 
Sbjct: 124 EKVSIAGRIHAKRESGSKLKFYVLHGDGVEVQVMSQLQDYHTESSYEDDHSLIKRGDIVG 183

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           ++G V   S +        G+I +   +I++L+      LP        + +R++ R+LD
Sbjct: 184 VEGYVGRTSPK----KGGEGEISVFVSRIQLLTPCL-HMLPTDHFGFKDQELRYRKRYLD 238

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           L  +       + R++II+ +R  +   NFIE  TP++   +        V    +    
Sbjct: 239 LIMNKDARNRFITRSKIISYVRKFLDTRNFIEVETPMMNVIAGGATAKPFVTHHNDLDMD 298

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +  AP+ + + L+  G DR ++I   FR+E       P EF   +   ++ +  D+++
Sbjct: 299 MYMRIAPELFLKELVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMD 357

Query: 252 TMENVLRGVFEEFSNGNTVSNN 273
             E ++  + +E +    +  +
Sbjct: 358 MTEIMISEMVKEITGSYVIKYH 379


>gi|307261136|ref|ZP_07542813.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306869166|gb|EFN00966.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 467

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 75/404 (18%), Positives = 133/404 (32%), Gaps = 56/404 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D       Q + N D A
Sbjct: 1   MSKFPTVSEILSGKVAVGEEVAVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQSIINNDLA 60

Query: 58  CF-EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
            + +    + +   + + G V+   AE          +EL A  +E++   E+       
Sbjct: 61  NYNDEVLRLTAGCSVIVTGKVVESPAEGQA-------VELHATHVEVVGWVEDPDTYPMA 113

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + +      +   L  R + +      R  +  ++      + F   +TP++TAS  EG
Sbjct: 114 AKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEG 173

Query: 177 ARDFLVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPC 219
           A +    S ++                 F+          Q      A    + +   P 
Sbjct: 174 AGEMFRVSTLDLENLPRTDEGKVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGPT 233

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------- 266
           FR E+  + R   EF+ ++ E +F    D     E++L+ VF+                 
Sbjct: 234 FRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKHI 293

Query: 267 --------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK 316
                    N +++ F ++ Y DAI        +   P+   +   +EH        F  
Sbjct: 294 DKDVITRLENFIASPFAQVDYTDAIEILLKSGKEFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + V    +            R   D     A     PG+  I 
Sbjct: 354 PVVVKNYPKDI-----KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 70/216 (32%), Gaps = 27/216 (12%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y+F  + E          AKH++            +++  +  F   D          
Sbjct: 271 LKYVFKAVLEERKDDMQF-FAKHIDKDVI------TRLENFIASPFAQVDYTDAIEIL-- 321

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEW---NEEEKKIDFAHNPFTMPQGGMESLKGN 472
                 +E        F   W +D          EE  K       +            +
Sbjct: 322 --LKSGKEF------EFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDIKAFYMRLND 373

Query: 473 DLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           D  ++ A   D++  G  EI  G  R    EV+      +G++       +       + 
Sbjct: 374 DGKTVAAM--DVLAPGIGEIIGGSQREERLEVLDTRMVEMGLNP----EDYWWYRDLRKY 427

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G  PH G   G +R+++ + G +N+REV  FP +  
Sbjct: 428 GTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRAPR 463


>gi|303238055|ref|ZP_07324596.1| lysine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302481751|gb|EFL44805.1| lysine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 576

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 56/301 (18%), Positives = 117/301 (38%), Gaps = 11/301 (3%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             D    V ++G +   R  G   F +I+D  G  QV    D  C    K + +     +
Sbjct: 47  KEDEKREVVIAGRLMGRRVMGKASFAEIQDSKGRIQVYITRDDLCPGENKDIYNVLFKKL 106

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFK 127
             +      +        G+I + AQ++ +LS + +    V  +      +     +R++
Sbjct: 107 LDIGDFVGIKGYVFKTQMGEISVHAQELTLLSKSLKPLPIVKYKDGVAYDKFDDPELRYR 166

Query: 128 YRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSR 185
            R++DL  +  + +   KR  ++ +MR       + E  TP L   +    AR F+    
Sbjct: 167 QRYVDLVVNEGVKETFQKRATVLRTMRNFFDEAGYTEVETPTLQTIAGGASARPFITHFN 226

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + +
Sbjct: 227 ALNTEMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRFHNP-EFTCMELYVQYKD 284

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT-DKPDLRNPIIMHNVTE 304
            + +++  E ++  +    +    +      I +    RR    D    +    +++ TE
Sbjct: 285 YNWMMSFTERLIEKICTAVNGKPEIQVGDKLISFKAPFRRLPILDAIKEKTGFDLNDKTE 344

Query: 305 H 305
            
Sbjct: 345 E 345



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 9/145 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+A+     +      + F
Sbjct: 379 EGSYIQPTFIIDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERF 438

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  +  ++          RA Q GMPP  GI  GIDR+VML+ G + ++EV LFP 
Sbjct: 439 KEQMRLADNGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGQEYIQEVLLFPQ 498

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGL 589
            +         P + S+++  E+G+
Sbjct: 499 MK----PEAKIPQS-SIKEWAEIGV 518


>gi|300716101|ref|YP_003740904.1| Asparaginyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299061937|emb|CAX59053.1| Asparaginyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 466

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 68/413 (16%), Positives = 134/413 (32%), Gaps = 36/413 (8%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLC 72
           V S V + GWV   R    GI F+ + D      V A  +++     +    + +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFIAVYDGSCFNPVQAVVNNSLNNYQDEVLRLTTGCSVI 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G V+    E  +        E+ A  +E++   ++        + +      +   L 
Sbjct: 76  ITGKVVESPGEGQS-------FEIQATAVEVVGWVDDPDTYPMAAKRHSIEYLREVAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----- 187
            R + +      R  +  ++      + F   STP++TAS  EGA +    S ++     
Sbjct: 129 PRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDMENLP 188

Query: 188 ---------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+   A      Q      AS   + +   P FR E+  + R   EF+
Sbjct: 189 RTPEGKVNFDEDFFGKEAFLTVSGQLNGETYASAISKIYTFGPTFRAENSNTSRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTDKPDL 293
            L+ E++F + +D     E +L+ VF+           F   R+  D   R       D 
Sbjct: 249 MLEPEIAFADLEDNAALAEAMLKYVFKAVLEERRDDMEFFAERVDKDAIARLERFVTTDF 308

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKI-----LSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
              +      E  +    +  + +     LS      +     K     + +   +  + 
Sbjct: 309 AQ-VDYTEAVEILIACGEKFENAVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDIKAFY 367

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
                 G       +   G    +G   +   +   +A    + +   D  ++
Sbjct: 368 MRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKEDYWWY 420



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+    + +G++K      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNK----EDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 426 YGTVPHSGFGLGFERLIAYVTGVQNVRDVIAFPRTPR 462


>gi|238785825|ref|ZP_04629795.1| Asparaginyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238713278|gb|EEQ05320.1| Asparaginyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 463

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 139/424 (32%), Gaps = 50/424 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSE 68
           G + V S V + GWV   R    GI F+ + D      + A  ++      +    + + 
Sbjct: 9   GRAAVDSEVTVRGWVRTRRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTTG 68

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G V++   E  +        E+ A  I+++   ++        + +      + 
Sbjct: 69  CSVEVTGTVVASPGEGQS-------FEIQATAIKVVGWVDDPDTYPMAAKRHSIEYLREV 121

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R + +      R  +  ++        +   STP++TAS  EGA +    S ++ 
Sbjct: 122 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 181

Query: 189 --------------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q      AS   + +   P FR E+  + R  
Sbjct: 182 ENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYASALSKVYTFGPTFRAENSNTSRHL 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTD 289
            EF+ ++ E++F   DD+    E +L+ VF+   N       F   R+  D   R     
Sbjct: 242 AEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERVDKDALDRLQRFV 301

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKI------------LSVNPGYEVWAIPAKGGGGN 337
             D    +   +  E    S  +  + +                  ++   +        
Sbjct: 302 TSDFAQ-VNYTDAIEILKASGQKFENDVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI 360

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           +AF  RMNE        G       +   G    +G   +   +   +A    + +   D
Sbjct: 361 KAFYMRMNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLEEMGLNKED 413

Query: 398 SCFF 401
             ++
Sbjct: 414 YWWY 417



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 43/120 (35%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    +V+   
Sbjct: 344 EKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDAR 403

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              +G++K      +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 404 LEEMGLNK----EDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRTPR 459


>gi|288799729|ref|ZP_06405188.1| lysine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332977|gb|EFC71456.1| lysine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 577

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 108/260 (41%), Gaps = 10/260 (3%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            +    V ++G +   R  G   F +++D  G  QV    D  C +  K + +     + 
Sbjct: 48  EEEQREVCIAGRMMTRRIMGKASFAELQDSKGRIQVYITRDDICPDENKDLYNTIFKRLL 107

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKY 128
            +      +       TG+I + A+++ +LS + +    V  + +          +R++ 
Sbjct: 108 DIGDFIGVKGFVFRTQTGEISVHAKELVLLSKSLKPLPIVKYKDDVAYDKFDDPELRYRQ 167

Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186
           R++DL  +  +    +KR   I ++R  + A  + E  TP L   +    AR F+     
Sbjct: 168 RYVDLVVNDGIKDTFLKRATAIKTLRDVLDAAGYTEVETPTLQQIAGGASARPFITHFNA 227

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + 
Sbjct: 228 LNTEMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP-EFTCMELYVQYKDY 285

Query: 247 DDILNTMENVLRGVFEEFSN 266
           + +++  E +L  +    + 
Sbjct: 286 NWMMDFTEKLLETICIAVNG 305



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 75/228 (32%), Gaps = 24/228 (10%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W     +  L  I   ++ S      G             I   +  + G D       +
Sbjct: 287 WMMDFTEKLLETICIAVNGSAETVVDGKTISFKAPYRRLPILDAIKEKTGYDLNGLSEEE 346

Query: 406 PLKFCSFAADARNHIAQELG---IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
             + C+        + + +G   +I+    EFC             E            P
Sbjct: 347 IREVCNKLN---LEVDESMGKGKLIDEIFGEFC-------------EGSFIQPTFITDYP 390

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
                  K +        +++L+ NG E+A+     +      + F       +  ++  
Sbjct: 391 VEMSPLTKKHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERFVEQMRLADKGDDEA 450

Query: 523 ----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                   RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP  +
Sbjct: 451 MIIDKDFLRALQYGMPPTSGIGIGIDRMVMLMTGQTAIQEVLLFPQMR 498


>gi|49522592|gb|AAH75373.1| aspartyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
          Length = 531

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 84/379 (22%), Positives = 144/379 (37%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL V      V +   VH  R  G   FL +R        +  V         + A ++ 
Sbjct: 80  DLTVQKADETVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGERASKQMVKFAANIT 139

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-------------P 113
            E ++ ++G+V  R  +    +     +EL  ++I ++S AE                  
Sbjct: 140 KESIVDVEGVV--RKVDQKIESCTQQDVELHIERIYVISAAEPRLPLQLEDAVRPETEGD 197

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ +    R  +  + F+E  TP + +++
Sbjct: 198 EEGRATVNQDTRLDNRVIDLRTSTSQAVFGLQSGVCQLFRETLTQKGFVEIQTPKIISAA 257

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 258 SEGGANVFTVSYFKTSAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 315

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNFL------------ 275
           F  LD+EM+F        D+I +T+  + +G+ E F +   TV   F             
Sbjct: 316 FVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQTEIQTVCKQFPSEPFKFLEPTLR 375

Query: 276 -RICYDDAIRR----YGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
                  A+ R       D+ DL  P    +  + +    ++F +  K  L+V P Y + 
Sbjct: 376 LEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFYTMP 435

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 436 DPQDPKYSNSYDMFMRGEE 454



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF             D     +  YD+   G EI SG  R H  +++ +  ++
Sbjct: 423 KYPLAVRPFYTMPD------PQDPK--YSNSYDMFMRGEEILSGAQRVHDPQLLTERATH 474

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP       
Sbjct: 475 HAIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRDPKRLT 530

Query: 571 L 571
            
Sbjct: 531 P 531


>gi|45361459|ref|NP_989306.1| aspartyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
 gi|39794467|gb|AAH64273.1| aspartyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
          Length = 531

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 84/379 (22%), Positives = 144/379 (37%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL V      V +   VH  R  G   FL +R        +  V         + A ++ 
Sbjct: 80  DLTVQKADETVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGERASKQMVKFAANIT 139

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-------------P 113
            E ++ ++G+V  R  +    +     +EL  ++I ++S AE                  
Sbjct: 140 KESIVDVEGVV--RKVDQKIESCTQQDVELHIERIYVISAAEPRLPLQLEDAVRPETEGD 197

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ +    R  +  + F+E  TP + +++
Sbjct: 198 EEGRATVNQDTRLDNRVIDLRTSTSQAVFGLQSGVCQLFRETLTQKGFVEIQTPKIISAA 257

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 258 SEGGANVFTVSYFKTSAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 315

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEF-SNGNTVSNNFL------------ 275
           F  LD+EM+F        D+I +T+  + +G+ E F +   TV   F             
Sbjct: 316 FVGLDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQTEIQTVCKQFPSEPFKFLEPTLR 375

Query: 276 -RICYDDAIRR----YGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
                  A+ R       D+ DL  P    +  + +    ++F +  K  L+V P Y + 
Sbjct: 376 LEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFYTMP 435

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 436 DPQDPKYSNSYDMFMRGEE 454



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF             D     +  YD+   G EI SG  R H  +++ +  ++
Sbjct: 423 KYPLAVRPFYTMPD------PQDPK--YSNSYDMFMRGEEILSGAQRVHDPQLLTERATH 474

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP       
Sbjct: 475 HAIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRDPKRLT 530

Query: 571 L 571
            
Sbjct: 531 P 531


>gi|209694158|ref|YP_002262086.1| lysyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|226710881|sp|B6EMX2|SYK_ALISL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|208008109|emb|CAQ78251.1| lysyl-tRNA synthetase, heat inducible [Aliivibrio salmonicida
           LFI1238]
          Length = 501

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 61/285 (21%), Positives = 128/285 (44%), Gaps = 25/285 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V   R      FL I++  G  Q  A+ D     + K ++ ++     G ++  
Sbjct: 64  VAIAGRVMAKRGP----FLLIQEVSGKIQAYASKD-----VQKELKEKYQGLDIGDIIGV 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                 +    G + ++ ++  +L+ A   PLP        + +R++ R++DL  +   +
Sbjct: 115 KGALHKSG--KGDLYVNMEEFVLLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNEDSR 171

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
              + R+++++++R  M+ + F+E  TP++        AR F+          Y L  AP
Sbjct: 172 TAFIIRSKVVSAIRNFMVDKGFMEVETPMMHVIPGGASARPFVTHHNALDVDMY-LRVAP 230

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R F+I   FR+E   S R   EF  ++  M++ + +D+++  E +L 
Sbjct: 231 ELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYNDLMDLTEAMLS 289

Query: 259 GVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
            V       + +            + R+   DAI+ Y  +  +++
Sbjct: 290 QVAISVLGSDKMPYGEYTVDFGGKYARLSMLDAIKMYNPEHAEIQ 334



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + ND  +    +++    G E+A+G    + ++   + F
Sbjct: 377 EPKLMQPTFITEYPADISPLARRNDNNAFITDRFEFFIGGREVANGFSELNDAQDQDERF 436

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +KE  ++           A + G+PP  G   GIDR+VML      +R+V LFP 
Sbjct: 437 KAQVSAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFPS 496

Query: 565 SQ 566
            +
Sbjct: 497 MR 498


>gi|311280156|ref|YP_003942387.1| asparaginyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308749351|gb|ADO49103.1| asparaginyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 466

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 124/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    G  FL I D      V A  +++     + V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGFSFLAIYDGSCFDPVQAVINNSLPNYNQEV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL A  +E+    ++        + +      +   L  R 
Sbjct: 72  CSVIVTGKIVASQGQGQAYELQATSVEVTGWVDDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            E++F + +D     E +L+ VF+           F                      ++
Sbjct: 252 PEVAFADLEDNARLAEAMLKYVFKAVLEERPDDMKFFAERVDSEAVSRLERFINADFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +   + F   + V    +          
Sbjct: 312 DYTDAVTILENCGKTFENPVFWGVDLSSEHERYLAEQHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+    + +G++K      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNK----EDYAWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 426 YGTVPHAGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|165976090|ref|YP_001651683.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|303252406|ref|ZP_07338572.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247646|ref|ZP_07529687.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|259511565|sp|B0BNV4|SYN_ACTPJ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|165876191|gb|ABY69239.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|302648865|gb|EFL79055.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306855814|gb|EFM87976.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 467

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 74/404 (18%), Positives = 132/404 (32%), Gaps = 56/404 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVV--ANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D      +    N D A
Sbjct: 1   MSKFPTVSEILSGKVAVGEEVAVRGWVRTRRDSKAGLSFLAVYDGSCFDPLQSIINNDLA 60

Query: 58  CF-EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
            + +    + +   + + G V+   AE          +EL A  +E++   E+       
Sbjct: 61  NYNDEVLRLTAGCSVIVTGKVVESPAEGQA-------VELHATHVEVVGWVEDPDTYPMA 113

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + +      +   L  R + +      R  +  ++      + F   +TP++TAS  EG
Sbjct: 114 AKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEG 173

Query: 177 ARDFLVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPC 219
           A +    S ++                 F+          Q      A    + +   P 
Sbjct: 174 AGEMFRVSTLDLESLPRTDEGKVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGPT 233

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------- 266
           FR E+  + R   EF+ ++ E +F    D     E++L+ VF+                 
Sbjct: 234 FRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKHI 293

Query: 267 --------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK 316
                    N +++ F ++ Y DAI        +   P+   +   +EH        F  
Sbjct: 294 DKDVITRLENFIASPFAQVDYTDAIEILLKSGKEFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + V    +            R   D     A     PG+  I 
Sbjct: 354 PVVVKNYPKDI-----KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 70/216 (32%), Gaps = 27/216 (12%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y+F  + E          AKH++            +++  +  F   D          
Sbjct: 271 LKYVFKAVLEERKDDMQF-FAKHIDKDVI------TRLENFIASPFAQVDYTDAIEIL-- 321

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEW---NEEEKKIDFAHNPFTMPQGGMESLKGN 472
                 +E        F   W +D          EE  K       +            +
Sbjct: 322 --LKSGKEF------EFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDIKAFYMRLND 373

Query: 473 DLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           D  ++ A   D++  G  EI  G  R    +V+      +G++       +       + 
Sbjct: 374 DGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDTRMVEMGLNP----EDYWWYRDLRKY 427

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G  PH G   G +R+++ + G +N+REV  FP +  
Sbjct: 428 GTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRAPR 463


>gi|47570088|ref|ZP_00240747.1| aspartyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553249|gb|EAL11641.1| aspartyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 432

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           + R  T  C        G  V L GWV ++R  G + FL IRD  G+ Q V   + A ++
Sbjct: 5   IKRSLTKEC----TKQSGKVVLLQGWVKKIRHLGNVSFLLIRDRSGVMQCVLENELAGYK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
           +               V+    E +  +     +E+ A +++IL+ AE LP  +  ++  
Sbjct: 61  VDVE-----------SVVQVVGEIVETSKTELGVEVLAHEVKILNGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR + +      ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVLSLRHERIAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E  F+ +  +++    +VLR +F++ +         L+I
Sbjct: 228 EFGFIHDFHEVMQLETDVLRYMFQQVAKKCEKELQLLQI 266



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 65/154 (42%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     ++  
Sbjct: 297 GDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTMPNKENPAITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F+  G+      ++F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYEMLLASFNEKGLHP----DKFQSYLTTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R++  LL   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERVIYKLLELTNVREASAFPRD 426


>gi|189463705|ref|ZP_03012490.1| hypothetical protein BACINT_00038 [Bacteroides intestinalis DSM
           17393]
 gi|189438655|gb|EDV07640.1| hypothetical protein BACINT_00038 [Bacteroides intestinalis DSM
           17393]
          Length = 467

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 63/295 (21%), Positives = 111/295 (37%), Gaps = 29/295 (9%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F
Sbjct: 1   MEKISRTKIVDVLKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQVVVDLANF 60

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+ K + +   L ++G +         A       E+ A++IE+L   +    P+  +
Sbjct: 61  DEEMLKDITTGACLSVNGELTESVGSGQKA-------EIQAREIEVLGTCD-NTYPLQKK 112

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R +   L  R +T       R  +  ++      + F+   TPI+TAS  EGA
Sbjct: 113 GHTLEFLR-EIAHLRPRTNTFGAVFRIRHNMAIAIHTFFHQKGFVYFHTPIITASDCEGA 171

Query: 178 RDFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
                 +  N                 F+    +     Q +  L A+     +   P F
Sbjct: 172 GQMFQVTTKNLYDLKKDEAGSIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F +  D ++  E  ++   +   +       FL
Sbjct: 232 RAENSNTPRHLAEFWMVEPEVAFNDITDNMDLAEEFIKFCVKWALDNCADDVKFL 286



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 74/222 (33%), Gaps = 31/222 (13%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCF-FIAGDPLKFCSFAA 414
           LA  F +      +       K LN +  + +  RL     +S       D +K    A 
Sbjct: 263 LAEEFIKFCVKWALDNCADDVKFLNDMFDKGLIERLQSVLKESFVRLSYTDGIKILEEAV 322

Query: 415 DARNHIAQELGIINCNCFEF--CWIMDFPFYEWNEEEKKIDFAHN----PFTMPQGGMES 468
                          + FEF   W +D      +E E+ +   H       T     +++
Sbjct: 323 A------------KGHKFEFPVYWGVDL----ASEHERYLVEEHFKRPVILTDYPKEIKA 366

Query: 469 L---KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
               +  D  +++A    L     EI  G  R      +L     + I  + +       
Sbjct: 367 FYMKQNEDGKTVRAMDV-LFPKIGEIIGGSEREADYNKLLTRIDEMHIPMKDMW----WY 421

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
               + G  PH G   G +R+++ + G  N+R+V  FP +  
Sbjct: 422 LDTRKFGTCPHSGFGLGFERLLLFVTGMANIRDVIPFPRTPR 463


>gi|170725302|ref|YP_001759328.1| lysyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|238688658|sp|B1KFR7|SYK_SHEWM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|169810649|gb|ACA85233.1| lysyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 501

 Score =  183 bits (465), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 67/327 (20%), Positives = 141/327 (43%), Gaps = 36/327 (11%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H   D+              +G    ++G +   R      FL I+D  G  Q  A  
Sbjct: 38  RKHKAADIQAEFGNNTKEELEGMGIQRSIAGRIMAKRGP----FLVIQDVSGRIQAYAGK 93

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D     + K +++ +     G ++  + +   +    G + ++ ++ ++L+ A   PLP 
Sbjct: 94  D-----VQKDLKATFQGLDIGDIIGVTGQLHLSG--KGDLYVNMEEYQLLTKALR-PLPE 145

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R++DL  +   +N  + R+++++++R  M+ + F+E  TP++ +  
Sbjct: 146 KFHGLTDQETRYRQRYVDLIVNEDSRNAFIMRSKVVSAIRNFMVKKEFMEVETPMMHSIP 205

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F         + Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 206 GGASARPFETHHNALDIAMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNP 263

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  ++  M++ + +D+++  E +L  +  E      +            + R+   DAI
Sbjct: 264 EFTMMEFYMAYADFNDLMDLTEEMLSSIATELCGSPQLPYGEHTVDFGGPYARLSMLDAI 323

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           ++Y  D   +++ +    V +     +
Sbjct: 324 KKYNPDNATIQS-MTYEEVKDVEFMRD 349



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 55/153 (35%), Gaps = 10/153 (6%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSI 477
           +A+ LG+     +           E   E  +       F        S     ND    
Sbjct: 350 LAKSLGMTIEKFWTC----GQLLEEIFGETAETQLMQPTFITGYPADISPLARRNDDNHF 405

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGM 533
              +++    G E+A+G    + +E     F     +K+  ++           A + G+
Sbjct: 406 ITDRFEFFIGGREVANGFSELNDAEDQDNRFKAQVDAKDAGDDEAMFYDADYITALEHGL 465

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP  G   GIDR+VML      +R+V LFP  +
Sbjct: 466 PPTAGQGIGIDRLVMLFTNTHTIRDVILFPAMR 498


>gi|291390509|ref|XP_002711779.1| PREDICTED: lysyl-tRNA synthetase isoform 2 [Oryctolagus cuniculus]
          Length = 624

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 60/276 (21%), Positives = 117/276 (42%), Gaps = 15/276 (5%)

Query: 6   THSCGDLGVSDVGS-----FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           TH   +      G       ++++G +H  R  G  +IF D+R      QV+AN  S  +
Sbjct: 133 THFIEEYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNY 190

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  +           G ++             G++ +   +I +LS      LP      
Sbjct: 191 KSEEEFTRINNKLRRGDIIGVQGNP--GKTKKGELSIIPHEITLLSPCL-HMLPHLHFGL 247

Query: 120 YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
             +  R++ R+LDL  +   +   + R++II  +R  +    F+E  TP++        A
Sbjct: 248 KDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVA 307

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   
Sbjct: 308 KPFITYHNELDMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTC 365

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +  M++ +  D++   E ++ G+ +  + G TV+ +
Sbjct: 366 EFYMAYADYHDLMEITEKMISGMVKHVTGGYTVTYH 401



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 42/114 (36%), Gaps = 12/114 (10%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     E+ +     +      Q F     +K   ++           A +
Sbjct: 506 KEGLTERFELFVMKKEVCNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 565

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ--------NFCDLLMGSP 576
            G+PP  G   GIDR+ M L  + N++EV LFP  +           D L  SP
Sbjct: 566 YGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDKKESVAATDTLESSP 619


>gi|57640694|ref|YP_183172.1| asparaginyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|73919760|sp|Q5JHC1|SYN_PYRKO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|57159018|dbj|BAD84948.1| asparaginyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 431

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 70/310 (22%), Positives = 131/310 (42%), Gaps = 32/310 (10%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSV 65
            C D+     G  V+L+GWV+R R  G  +F+ +RD  GI QVV + D     +  AK V
Sbjct: 6   YCADVTPEMEGKKVKLAGWVYRKREVGKKVFIVLRDSSGIVQVVFSKDLNEEAYREAKKV 65

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + I+G V +           TG  E+  +K++I+   +  P+     ++  +   
Sbjct: 66  GIESSVIIEGTVKADP------RAPTGA-EVQGEKLQIIQNVDFFPIT----KDASDEFL 114

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR   +   +  +  ++ + R  ++ + + E   PIL   + EG         
Sbjct: 115 LDVRHLHLRSPKVAAIMKVKGTLMQAAREWLLQDGWYEVFPPILVTGAVEGGATLFKLKY 174

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++  +  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E ++++
Sbjct: 175 FDR--YAYLSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD 231

Query: 246 QDDILNTMENVLRGVFE----------------EFSNGNTVSNNFLRICYDDAIRRYGTD 289
             DI+   E ++  + +                +          F RI YD+AI    + 
Sbjct: 232 LWDIMKVEEELVSYMVQRTLELRKKEIELYRKDDIKTLKNAVPPFPRISYDEAIDILQSK 291

Query: 290 KPDLRNPIIM 299
             ++     M
Sbjct: 292 GVNIEWGEDM 301



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 19/130 (14%)

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN--GFEIASGGIRN 498
           PF+ +             F M +         D   + A   D++      EI  G  R 
Sbjct: 316 PFFVY-----GYPKHIKAFYMKED------PEDPRKVLAA--DMLAPEGYGEIIGGSQRE 362

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + ++Q     G+  E  E          + G  PH G   G++R+V  +L   +VR 
Sbjct: 363 DDYDKLVQRILEEGMKPEDYE----WYLDLRKYGSVPHSGFGLGLERLVAWVLKLDHVRW 418

Query: 559 VSLFPMSQNF 568
            +LFP + + 
Sbjct: 419 ATLFPRTPSR 428


>gi|307245528|ref|ZP_07527615.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307254484|ref|ZP_07536320.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258942|ref|ZP_07540673.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306853587|gb|EFM85805.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306862534|gb|EFM94492.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306866966|gb|EFM98823.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 467

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 75/404 (18%), Positives = 132/404 (32%), Gaps = 56/404 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D       Q + N D A
Sbjct: 1   MSKFPTVSEILSGKVAVGEEVAVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDLA 60

Query: 58  CF-EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
            + +    + +   + + G V+   AE          +EL A  +E++   E+       
Sbjct: 61  NYNDEVLRLTAGCSVIVTGKVVESPAEGQA-------VELHATHVEVVGWVEDPDTYPMA 113

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + +      +   L  R + +      R  +  ++      + F   +TP++TAS  EG
Sbjct: 114 AKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEG 173

Query: 177 ARDFLVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPC 219
           A +    S ++                 F+          Q      A    + +   P 
Sbjct: 174 AGEMFRVSTLDLENLPRTEEGKVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGPT 233

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------- 266
           FR E+  + R   EF+ ++ E +F    D     E++L+ VF+                 
Sbjct: 234 FRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKHI 293

Query: 267 --------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK 316
                    N ++  F ++ Y DAI        +   P+   +   +EH        F  
Sbjct: 294 DKDVITRLENFIAAPFAQVDYTDAIEILLKSGKEFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + V    +            R   D     A     PG+  I 
Sbjct: 354 PVVVKNYPKDI-----KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 70/216 (32%), Gaps = 27/216 (12%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y+F  + E          AKH++            +++  +  F   D          
Sbjct: 271 LKYVFKAVLEERKDDMQF-FAKHIDKDVI------TRLENFIAAPFAQVDYTDAIEIL-- 321

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEW---NEEEKKIDFAHNPFTMPQGGMESLKGN 472
                 +E        F   W +D          EE  K       +            +
Sbjct: 322 --LKSGKEF------EFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDIKAFYMRLND 373

Query: 473 DLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           D  ++ A   D++  G  EI  G  R    +V+      +G++       +       + 
Sbjct: 374 DGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDTRMVEMGLNP----EDYWWYRDLRKY 427

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G  PH G   G +R+++ + G +N+REV  FP +  
Sbjct: 428 GTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRAPR 463


>gi|293396749|ref|ZP_06641025.1| asparagine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291421013|gb|EFE94266.1| asparagine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 466

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 71/422 (16%), Positives = 139/422 (32%), Gaps = 46/422 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G + V S V + GWV   R    GI FL + D      + A  +++       V    + 
Sbjct: 12  GRAAVDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPLQAVVNNSLPNYQDEV----LH 67

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  + + + +       EL A  I+++   ++        + +      +   L
Sbjct: 68  LTTGCSVEVTGKVVASPGEGQSFELQATAIKVVGWVDDPDTYPMAAKRHSIEYLREVAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R + +      R  +  ++   +    +   STP++TAS  EGA +    S ++    
Sbjct: 128 RPRTNLIGAVARVRHTLAQAIHRFLHENGYFWVSTPLITASDTEGAGEMFRVSTLDLENL 187

Query: 190 ------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRDDKGAVDFSQDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTDKPD 292
           + ++ E++F   DD+    E++L+ VF+   +       F   R+  D   R       D
Sbjct: 248 WMVEPEVAFASLDDVAGLAESMLKYVFQAVLDERADDMQFFAERVDKDAVERLKRFVTSD 307

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILS-------------VNPGYEVWAIPAKGGGGNRA 339
               +   +  E  + S  + F   +S                 ++   +        +A
Sbjct: 308 FAQ-VDYTDAVEILLASG-QTFENPVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDIKA 365

Query: 340 FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC 399
           F  RMNE        G       +   G    +G   +   +   +     + +   D  
Sbjct: 366 FYMRMNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDQRLEEMGLNKEDYW 418

Query: 400 FF 401
           ++
Sbjct: 419 WY 420



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 44/120 (36%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    +V+ Q 
Sbjct: 347 EKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDQR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              +G++K      +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 407 LEEMGLNK----EDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|312194051|ref|YP_004014112.1| lysyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311225387|gb|ADP78242.1| lysyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 488

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 68/341 (19%), Positives = 132/341 (38%), Gaps = 21/341 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           +  D+  +  G+  R++G +   R  GG++F  I+D  G  Q+  N +    E  K    
Sbjct: 24  TSADVQAAPDGTPARVAGRLMLWRRMGGLVFGTIQDRAGRVQISLNRNELGEETYKE--W 81

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
              + +   V       +      G+  + A    +L+ A    LP           R++
Sbjct: 82  HSSVKVGDFV---GVTGVVFTTRKGERTVGATDFAVLNKAVR-ALPDKWHGIADVETRYR 137

Query: 128 YRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSR 185
            R+LDL  +   +     R+R+I+ +R  +   +F+E  TP+LT A+S   AR F+    
Sbjct: 138 RRYLDLLANPASRERFQTRSRVISRIRRFLDDADFLEVETPVLTEAASGAAARPFITRHN 197

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                FY L  +P+ Y + ++A  FDR ++I   FR+E         EF  L+   ++ +
Sbjct: 198 ALGEDFY-LRISPETYLKRVVAGSFDRVYEIGRNFRNEGID-PSHLQEFTMLEWYAAYWD 255

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             D +  +  ++  + ++             + Y+     +G D P +       +  E 
Sbjct: 256 YRDNMRFVRELILAILDDVIGS-------RTVTYEGTKLDFGADWPVIDY----RDAVES 304

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
               + RV     ++        +         A  D + +
Sbjct: 305 RTGVDLRVVRDFETLKTKCADLGLDVSKAASYAALVDLLYK 345



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 5/122 (4%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           P         +    D+  + A  ++LV    E+     +    E      +       +
Sbjct: 367 PLARRSDDDPTRL--DMFQVVANGWELVKAYSELVDPVDQRERLEEQADLRAAGDDETMM 424

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
           +E  F     A + GMPP  G+  GIDR + L+  A  +R+V LFP  +         P+
Sbjct: 425 LEEDF---IEAMEYGMPPMSGLGLGIDRFIALITDAPTLRDVVLFPSMRGAKGPESTEPA 481

Query: 578 TV 579
             
Sbjct: 482 QA 483


>gi|270295934|ref|ZP_06202134.1| lysyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270273338|gb|EFA19200.1| lysyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 576

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 56/291 (19%), Positives = 117/291 (40%), Gaps = 10/291 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +         V ++G +   R  G   F++++D  G  QV    D  C + 
Sbjct: 36  NAFSTDIKAEFNDDAEPRQVSVAGRIMSRRIMGKASFIELQDSKGRIQVYITRDDICPDE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + A+K+ +L+ + +    V  +    
Sbjct: 96  DKEMYNTVFKRLLDLGDFIGIEGFVFRTQMGEISIHAKKLTVLAKSIKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                   +R++ R++DL  +  + +  +KR  +I +MR  +    + E  TPIL +   
Sbjct: 156 YDSFEDPELRYRQRYVDLIVNDGVKEKFLKRATVIKTMRAVLDEAGYTEVETPILQSIPG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+  GF+  ++I   FR+E    +  P E
Sbjct: 216 GASARPFITHHNSLDIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           F  +++ + + + + +++  E +L  +    +       +   I +    R
Sbjct: 274 FTCMELYVQYKDYNWMMSFTEKLLERICIAVNGCTETEIDGKSISFKAPYR 324



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 86/259 (33%), Gaps = 45/259 (17%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W  S  +  L  I   ++        G             I   +  + G D       +
Sbjct: 288 WMMSFTEKLLERICIAVNGCTETEIDGKSISFKAPYRRLPILEAIKEKTGYDLEGKSEDE 347

Query: 406 PLKFCSFAADARNHIAQELG---IINCNCFEFC--------WIMDFPFYEWNEEEKKIDF 454
             + C         I   +G   +I+    EFC        +I D+P             
Sbjct: 348 IRQVCKELN---MEIDDTMGKGKLIDEIFGEFCEGTFIQPTFITDYP------------V 392

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             +P T        L           +++L+ NG E+A+     +      + F +    
Sbjct: 393 EMSPLTKMHRSKPGL---------TERFELMVNGKELANAYSELNDPIDQEERFKDQLRL 443

Query: 515 KEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            E  ++          +A Q GMPP  GI  GIDR+ ML+ G   ++EV  FP  +    
Sbjct: 444 SEKGDDEAMFIDQDFLKALQYGMPPTSGIGIGIDRLTMLMTGESFIQEVLFFPQMRPEKV 503

Query: 571 LLMGSPSTVSVEQLRELGL 589
           +   +P+  +     ELG+
Sbjct: 504 IPKDAPARYT-----ELGI 517


>gi|308234248|ref|ZP_07664985.1| lysyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943530|ref|ZP_08240995.1| lysine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491499|gb|EGF23273.1| lysine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 518

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 103/252 (40%), Gaps = 17/252 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK---SVRSEWVLCIDGLVM 78
            ++G +   R  G + F+ + D  G  Q+    ++   +       +    ++   G+++
Sbjct: 67  TVAGRIRAYRRQGKVCFIVLEDKTGTIQLFLRINNMSEQDWNLLLQLDLGDIIQATGVIV 126

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                        GQ+ +S  K+ +LS +   PLP          IR++ R++DL  +  
Sbjct: 127 RTRR---------GQLSVSVTKLVLLSKSVR-PLPEKFHGLSDREIRYRQRYVDLIMNPE 176

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQ 196
            +++ + R+ II+ +R  M  + ++E  TP++        AR F          FY L  
Sbjct: 177 VRDVFRKRSHIISLIRRFMENQGYLEVETPMMHQILGGANARPFTTHFNALDCDFY-LRI 235

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A +   + L+  G DR F+I   FR+E       P EF  ++   ++     +    E +
Sbjct: 236 ATELPLKRLIVGGMDRVFEIGRQFRNEGMDLTHNP-EFTSMEAYCAYSNLQGMKELTEQM 294

Query: 257 LRGVFEEFSNGN 268
            + + ++     
Sbjct: 295 FQLIAQDVCGCE 306



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 82/221 (37%), Gaps = 28/221 (12%)

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
            +G   + Y   R++ SG    +  ++   + V  E I +   ++   +         + 
Sbjct: 306 EKGSEIITYQDKRVNMSGTWRSV-ALSDVASEVVGEKINMDTPVEHLRALCDKHEISWEE 364

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
              A      I  ELG       +  ++ D+P               +P +  +     L
Sbjct: 365 SWGAGKLLFEIYDELG--EQTLQDPTFVCDYP------------AEVSPLSKRKDEDPRL 410

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL---- 525
                      +++LV  G E A+     +      Q F     +K + ++   G     
Sbjct: 411 TD---------RFELVICGHEYANAFSELNDPVDQAQRFMAQVKAKGMGDDEAMGYDYDY 461

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            RA + GMPP GGI  GIDR++ML     ++R+V LFP  +
Sbjct: 462 VRALEYGMPPTGGIGYGIDRMIMLFCDQPSIRDVLLFPQMK 502


>gi|218897182|ref|YP_002445593.1| aspartyl-tRNA synthetase [Bacillus cereus G9842]
 gi|218544808|gb|ACK97202.1| aspartyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 432

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C    +   G  V L GWV ++R  G + FL +RD  G+ Q V     A + 
Sbjct: 5   MKRSLTKEC----MEQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENGLAGY- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++  
Sbjct: 60  ---KVDVESVVHVIGEIVETSKTEL-------GVEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEILIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TM      ++  
Sbjct: 297 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTMQNKENPAITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+       +F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----EKFQSYLNTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|30995440|ref|NP_439453.2| asparaginyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|20141639|sp|P43829|SYN_HAEIN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
          Length = 467

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 75/429 (17%), Positives = 137/429 (31%), Gaps = 68/429 (15%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 17  IGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYESEILRLTTGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   AE          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGKVVESPAEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RSENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           N V+++F
Sbjct: 250 MVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENFVNSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH        F   + V    +       
Sbjct: 310 AQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
                R   D     A     PG+  I            +G   +   +   +     + 
Sbjct: 365 KAFYMRLNDDEKTVAAMDVLAPGIGEI------------IGGSQREERLEVLDKRMEEMG 412

Query: 393 MQDGDSCFF 401
           +   D  ++
Sbjct: 413 LNPDDYWWY 421



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
             +D  ++ A   D++  G  EI  G  R    EV+ +    +G++ +            
Sbjct: 371 LNDDEKTVAAM--DVLAPGIGEIIGGSQREERLEVLDKRMEEMGLNPDDYW----WYRDL 424

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 425 RKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPR 463


>gi|123441875|ref|YP_001005858.1| asparaginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332162184|ref|YP_004298761.1| asparaginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|166232743|sp|A1JMN8|SYN_YERE8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|122088836|emb|CAL11642.1| asparaginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318606238|emb|CBY27736.1| asparaginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325666414|gb|ADZ43058.1| asparaginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330860164|emb|CBX70485.1| asparaginyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 466

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 70/424 (16%), Positives = 139/424 (32%), Gaps = 50/424 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSE 68
           G + V S V + GWV   R    GI F+ + D      + A  ++      +    + + 
Sbjct: 12  GRAAVDSEVTVRGWVRTRRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTTG 71

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G V++   E  +        E+ A  I+++   ++        + +      + 
Sbjct: 72  CSVEVTGTVVASPGEGQS-------FEIQATAIKVVGWVDDPDTYPMAAKRHSIEYLREV 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R + +      R  +  ++        +   STP++TAS  EGA +    S ++ 
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 189 --------------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q      A    + +   P FR E+  + R  
Sbjct: 185 ENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHL 244

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTD 289
            EF+ ++ E++F   DD+    E +L+ VF+   N       F   R+  D   R     
Sbjct: 245 AEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERVDKDAVDRLQRFV 304

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKI------------LSVNPGYEVWAIPAKGGGGN 337
             D    +   +  E  + S  +  + +                  ++   +        
Sbjct: 305 TSDFAQ-VDYTDAIEILLASGQKFENDVSWGIDLSSEHERYLAEQHFKAPVVVKNYPKDI 363

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           +AF  RMNE        G       +   G    +G   +   +   +A    + +   D
Sbjct: 364 KAFYMRMNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKED 416

Query: 398 SCFF 401
             ++
Sbjct: 417 YWWY 420



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 14/111 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M           D  ++ A   D++  G  EI  G  R    +V+    + +G++K 
Sbjct: 365 AFYMRMNE-------DGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARLAEMGLNK- 414

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 415 ---EDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRTPR 462


>gi|294874358|ref|XP_002766916.1| lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239868291|gb|EEQ99633.1| lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 585

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 62/299 (20%), Positives = 118/299 (39%), Gaps = 27/299 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG-IIFLDIR-DHYGITQVVANPD---SACFEIA-KSVRSE 68
                 V L+G     R  G  ++F D+  D + I  +    D      F  A K V   
Sbjct: 119 QHTADVVCLAGRAMSKRESGKHMVFYDLWEDGHKIQVMSVAQDWTGDVDFATAHKEVHRG 178

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G+V              G++ +   +I +LS      LP        + +RF+ 
Sbjct: 179 DIIGVKGVV---------GKSKRGELSIFPSEIRLLSTC-MHMLPKAQFGLKDQEVRFRQ 228

Query: 129 RFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186
           R+LDL  +   +    +R++II  +R  +    F+E  TP++   +    A+ F+     
Sbjct: 229 RYLDLIMNPHVRETFQRRSQIIGYIRSYLGNRGFMEVETPMMNMIAGGASAKPFITHHNE 288

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  AP+ Y ++L+  G DR F+I   FR+E       P EF   +  M++ + 
Sbjct: 289 LDLDLY-MRIAPELYLKMLVVGGLDRVFEIGKNFRNEGIDLTHNP-EFTSCEFYMAYADY 346

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           +D++N  E ++ G+ +             ++ +          + D   P    ++ E 
Sbjct: 347 NDLMNMTEEMISGMVKSIFGTY-------KVTFHPEGPEGPAKEIDFSPPWKRVSMVEE 398



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++    G EI +     +     L  F+    +K   ++           A +
Sbjct: 476 KPGLTERFEGFVMGKEICNAYTELNDPVKQLACFTAQAQAKAAGDDEACDVDNSFVTALE 535

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG   G+DR+ M L    N++EV L+P  +
Sbjct: 536 YGLPPTGGWGLGVDRLCMFLTDNINIKEVILYPAMK 571


>gi|228965182|ref|ZP_04126276.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228794416|gb|EEM41928.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 428

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C    +   G  V L GWV ++R  G + FL +RD  G+ Q V     A + 
Sbjct: 1   MKRSLTKEC----MEQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENGLAGY- 55

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++  
Sbjct: 56  ---KVDVESVVHVIGEIVETSKTEL-------GVEVLAHEVKVINGAEPLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEILIENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +    +    L+I
Sbjct: 224 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 262



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TM      ++  
Sbjct: 293 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTMQNKENPAITD 341

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+       +F      F+ 
Sbjct: 342 S---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----EKFQSYLNTFRY 388

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 389 GCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 422


>gi|119476450|ref|ZP_01616801.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119450314|gb|EAW31549.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 503

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 66/343 (19%), Positives = 132/343 (38%), Gaps = 24/343 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +     ++G +   R      FL ++D  G  Q   +      +    +++  +  I
Sbjct: 54  LEQLDRRAAVAGRIMAKRGP----FLVLQDMSGRIQAYVDKKKLPEQQLPEIKTWDIGDI 109

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G       E        G + +    +E+L+ +   PLP        + +R++ R++DL
Sbjct: 110 IGC------EGPVHKSGKGDLYVYMDSVELLTKSLR-PLPDKFHGLQDQEMRYRQRYVDL 162

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
              D        R+++I+ MR  +   +F+E  TP++        AR F+          
Sbjct: 163 IVSDESRDVFKLRSKMISFMRRYLDNADFMEVETPMMQVIPGGATARPFVTHHNSLDMDM 222

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+R ++I   FR+E   +   P EF  L+   S+ +  ++++
Sbjct: 223 Y-LRVAPELYLKRLVVGGFERVYEINRNFRNEGLSTRHNP-EFTMLEFYQSYADYKELMD 280

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E++LR + +       + N       +           DL  P    +V +  +H   
Sbjct: 281 LTEDMLREMAKALLGTTILLNTVKNEDGEIV----QEKHYDLSQPFTRISVFDSILHFNP 336

Query: 312 RVFSKILSVNPGYEVWA----IPAK-GGGGNRAFCDRMNEWAR 349
            + ++ L+        A    IP K G G  +   +   +   
Sbjct: 337 DISAEALADEQAARQIAEHLDIPLKDGYGLGKVHIEIFEKTVE 379



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 107/335 (31%), Gaps = 16/335 (4%)

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            +     +++  D +     +++        G   +  F+       +  Y    P+L  
Sbjct: 178 MISFMRRYLDNADFMEVETPMMQ-----VIPGGATARPFVTHHNSLDMDMYLRVAPELYL 232

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
             ++    E          ++ LS     E   +       +      + E    +    
Sbjct: 233 KRLVVGGFERVYEINRNFRNEGLSTRHNPEFTMLEFYQSYADYKELMDLTEDMLREMAKA 292

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L      L+   N  G     KH ++          D        F      +  +    
Sbjct: 293 LLGTTILLNTVKNEDGEIVQEKHYDLSQPFTRISVFD----SILHFNPDISAEALADEQA 348

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           AR  IA+ L I   + +    +     +E   E  ++D        P       + ND  
Sbjct: 349 ARQ-IAEHLDIPLKDGYGLGKV-HIEIFEKTVE-HRLDQPTFITEYPTEVSPLARRNDSN 405

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQC 531
            +   +++    G EIA+G    + +E   + F      K   ++           A + 
Sbjct: 406 PMVTDRFEFFVGGREIANGFSELNDAEDQAERFLAQVKEKAAGDDEAMHYDADYVAALEY 465

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP  G   GIDR+VML   + ++R+V LFP  +
Sbjct: 466 GLPPTAGEGIGIDRLVMLFSDSPSIRDVLLFPHMR 500


>gi|153815221|ref|ZP_01967889.1| hypothetical protein RUMTOR_01455 [Ruminococcus torques ATCC 27756]
 gi|317502320|ref|ZP_07960489.1| asparagine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331089924|ref|ZP_08338816.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145847480|gb|EDK24398.1| hypothetical protein RUMTOR_01455 [Ruminococcus torques ATCC 27756]
 gi|316896276|gb|EFV18378.1| asparagine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330403156|gb|EGG82717.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 463

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 117/353 (33%), Gaps = 51/353 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWV 70
             S +G  V + GWV  +R      F+ + D      +    + +   F     +     
Sbjct: 13  RESYLGKKVTIGGWVRSLRDSKTFGFIVVNDGSYFEPLQIVYHDEMENFAEVSKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A +++I   A     P+  +R   E +R     
Sbjct: 73  IIVKGTLVATPQ-------AKQPFEIQADEVQIEG-ASASDYPLQKKRHTFEYLR-TISH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++        F+   TP++T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSLAAYAIHKFFQERGFVYVHTPLITGSDCEGAGEMFRVTTLDMDQ 183

Query: 190 -------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+    +     Q      A  F   +   P FR E+  + R   E
Sbjct: 184 IPKNEDGTVDYTKDFFGKETSLTVSGQLNGETYAQAFRSIYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F + +D ++  E++L+ V            NF                   
Sbjct: 244 FWMIEPEIAFADLEDDMDLAESMLKYVINYVLENAPEEMNFFNSFVDKGLLERLNNVANS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
              R+ Y +AI     +       +       TEH  +   +V+ + + V   
Sbjct: 304 DFARVTYTEAIEILEKNNDKFEYKVSWGCDLQTEHERYLTEQVYKRPVFVTDY 356



 Score = 85.1 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K        F M Q        ND     A    LV    EI 
Sbjct: 349 RPVFVTDYP-----KEIK-------AFYMKQ--------NDDGKTVAAVDCLVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    E +L   + +G+ ++     +G      + G   H G   G +R VM L G
Sbjct: 389 GGSQREDDYEKLLARMNELGLDEKD----YGFYLDLRKYGSTRHAGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N C+L
Sbjct: 445 MSNIRDVIPFPRTVNNCEL 463


>gi|300173468|ref|YP_003772634.1| asparaginyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887847|emb|CBL91815.1| Asparaginyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 435

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 71/300 (23%), Positives = 123/300 (41%), Gaps = 16/300 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCI 73
           VG  V++  W+ + R  G + FL +RD         V A+   A FE+AK+++ E  L +
Sbjct: 17  VGQTVKIGAWLRQKRGSGKLAFLQLRDGSAFFQAVVVKADISEALFELAKNLKQETSLYV 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +  +          E++   IEI+  + + P+     +E+     F  R L L
Sbjct: 77  TGEIHEDARSSF-------GYEMAVSNIEIIGESHDYPITP---KEHGTDFLFDERHLYL 126

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +I +       E F +  +P+LT S+PEG  D        + +F  
Sbjct: 127 RHLKPFATLKIRNTLIAATYEFFNNEGFTKLDSPLLTGSAPEGTTDLFETDYFGESAF-- 184

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L   
Sbjct: 185 LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAFMHQEESLVIQ 243

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           E  +  +  +    N    + L+   D          P +     +  + E+    E+ V
Sbjct: 244 ERYISFLISKVLEKNEQELDILKRDKDLLQSYTELPYPRVSYDDAIKLLQENGFDVEWGV 303



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 17/151 (11%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           ++  N F+  W +DF        E+     H    +             +   A + D+V
Sbjct: 291 LLQENGFDVEWGVDF-----GSPEETFLANHFAKPVFIVNFPKAIKAFYMKRHATREDVV 345

Query: 486 C--------NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
                       EI  G  R+   + + Q     G+S       +G      Q G  PH 
Sbjct: 346 VSADLLAPEGYGEIIGGSERDTDYDYLKQRIEEEGLSL----EEYGWYLDLRQYGSVPHA 401

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           G   G++R+V  + G +++RE   FP   N 
Sbjct: 402 GFGLGLERLVTFVTGEEHIREAIPFPRMTNR 432


>gi|32033728|ref|ZP_00134023.1| COG0017: Aspartyl/asparaginyl-tRNA synthetases [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208155|ref|YP_001053380.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|190149984|ref|YP_001968509.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307263312|ref|ZP_07544930.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|166231655|sp|A3N039|SYN_ACTP2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|259511564|sp|B3H198|SYN_ACTP7 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|126096947|gb|ABN73775.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|189915115|gb|ACE61367.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306871374|gb|EFN03100.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 467

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 75/404 (18%), Positives = 132/404 (32%), Gaps = 56/404 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D       Q + N D A
Sbjct: 1   MSKFPTVSEILSGKVAVGEEVAVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQSIINNDLA 60

Query: 58  CF-EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
            + +    + +   + + G V+   AE          +EL A  +E++   E+       
Sbjct: 61  NYNDEVLRLTAGCSVIVTGKVVESPAEGQA-------VELHATHVEVVGWVEDPDTYPMA 113

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + +      +   L  R + +      R  +  ++      + F   +TP++TAS  EG
Sbjct: 114 AKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEG 173

Query: 177 ARDFLVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPC 219
           A +    S ++                 F+          Q      A    + +   P 
Sbjct: 174 AGEMFRVSTLDLENLPRTEEGKVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGPT 233

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------- 266
           FR E+  + R   EF+ ++ E +F    D     E++L+ VF+                 
Sbjct: 234 FRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKHI 293

Query: 267 --------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK 316
                    N ++  F ++ Y DAI        +   P+   +   +EH        F  
Sbjct: 294 DKDVITRLENFIAAPFAQVDYTDAIEILLKSGKEFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + V    +            R   D     A     PG+  I 
Sbjct: 354 PVVVKNYPKDI-----KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 70/216 (32%), Gaps = 27/216 (12%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y+F  + E          AKH++            +++  +  F   D          
Sbjct: 271 LKYVFKAVLEERKDDMQF-FAKHIDKDVI------TRLENFIAAPFAQVDYTDAIEIL-- 321

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEW---NEEEKKIDFAHNPFTMPQGGMESLKGN 472
                 +E        F   W +D          EE  K       +            +
Sbjct: 322 --LKSGKEF------EFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDIKAFYMRLND 373

Query: 473 DLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           D  ++ A   D++  G  EI  G  R    +V+      +G++       +       + 
Sbjct: 374 DGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDTRMVEMGLNP----EDYWWYRDLRKY 427

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G  PH G   G +R+++ + G +N+REV  FP +  
Sbjct: 428 GTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRAPR 463


>gi|260581351|ref|ZP_05849167.1| asparaginyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1574761|gb|AAC22949.1| asparaginyl-tRNA synthetase (asnS) [Haemophilus influenzae Rd KW20]
 gi|260092018|gb|EEW75965.1| asparaginyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 477

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 75/429 (17%), Positives = 137/429 (31%), Gaps = 68/429 (15%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 27  IGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYESEILRLTTGCSVI 86

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   AE          +EL A+K+E+    E+        + +      +   L 
Sbjct: 87  VTGKVVESPAEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 139

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 140 PRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 199

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 200 RSENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 259

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           N V+++F
Sbjct: 260 MVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENFVNSDF 319

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH        F   + V    +       
Sbjct: 320 AQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDI----- 374

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
                R   D     A     PG+  I            +G   +   +   +     + 
Sbjct: 375 KAFYMRLNDDEKTVAAMDVLAPGIGEI------------IGGSQREERLEVLDKRMEEMG 422

Query: 393 MQDGDSCFF 401
           +   D  ++
Sbjct: 423 LNPDDYWWY 431



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
             +D  ++ A   D++  G  EI  G  R    EV+ +    +G++ +            
Sbjct: 381 LNDDEKTVAAM--DVLAPGIGEIIGGSQREERLEVLDKRMEEMGLNPDDYW----WYRDL 434

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 435 RKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPR 473


>gi|119776009|ref|YP_928749.1| lysyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166229824|sp|A1S9M3|SYK_SHEAM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|119768509|gb|ABM01080.1| lysyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 500

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 65/311 (20%), Positives = 127/311 (40%), Gaps = 35/311 (11%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H   +L              +G    ++G V   R      FL ++D  G  Q  A+ 
Sbjct: 37  RKHKAAELQAQFGDKTKEELEALGFQTAIAGRVMAKRGP----FLVLQDVSGRIQAYADK 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                     ++  +     G ++        +    G + ++ ++ E+L+ A   PLP 
Sbjct: 93  GVQA-----DLKDRYAGLDIGDIIGVEGTLHLSG--KGDLYVNMERYELLTKALR-PLPE 144

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  R++ R++DL  +   +   K R++++ ++R  MI + F+E  TP++    
Sbjct: 145 KFHGLTDQETRYRQRYVDLIVNEDSREAFKMRSKVVAAIRNFMIKKEFMEVETPMMHVIP 204

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   
Sbjct: 205 GGASARPFVTHHNALDIEMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHNP 262

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAI 283
           EF  ++  M++ +  D+++  E +L  + +E      +            + R+   +AI
Sbjct: 263 EFTMMEFYMAYADYKDLIDLTEEMLSSIAKELLGDTKLPYGEHVIDFGGPYTRMSMLEAI 322

Query: 284 RRYGTDKPDLR 294
           + Y  D   ++
Sbjct: 323 KHYNPDNATIQ 333



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 77/234 (32%), Gaps = 30/234 (12%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHL----------------NIVNTEAIRVRLDMQDGDSC 399
           +AY  ++         +  +AK L                      ++   +   + D+ 
Sbjct: 271 MAYADYKDLIDLTEEMLSSIAKELLGDTKLPYGEHVIDFGGPYTRMSMLEAIKHYNPDNA 330

Query: 400 FFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEW---NEEEKKIDFAH 456
              A    +  +   D    +A+++GI     +           E       E K+    
Sbjct: 331 TIQAMTYEEVKNI--DFMRKLAKDVGIETETFWSCG-----QLLEEIFGETAEPKLMQPT 383

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
                P       + +D       +++    G E+A+G    + +E     F     +K+
Sbjct: 384 FITGYPADISPLARRSDGNDFITDRFEFFIGGREVANGFSELNDAEDQDNRFKAQVEAKD 443

Query: 517 VVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             ++           A + G+PP  G   GIDR+VML      +R+V LFP  +
Sbjct: 444 AGDDEAMFYDADFITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFPAMR 497


>gi|330997598|ref|ZP_08321444.1| lysine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329570309|gb|EGG52044.1| lysine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 575

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 55/280 (19%), Positives = 114/280 (40%), Gaps = 10/280 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             ++    V ++G +   R  G   FL+++D  G  QV    D  C    K + +     
Sbjct: 48  DAAEEKRQVCIAGRIMSRRIMGKASFLELQDSKGRIQVYVTRDDICPGENKDLYNTVFKK 107

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------YPESIRF 126
           +  L      +       TG+I +  Q++ +L+ +      V  +            +R+
Sbjct: 108 LLDLGDFVGIKGFVFKTQTGEISVHTQELTVLAKSLRPLPIVKMKDGEVYDSFDDPELRY 167

Query: 127 KYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  ++ + +  +KR+ I+ ++R  +    + E  TPIL +      AR F+   
Sbjct: 168 RQRYVDLIVNSGVKETFLKRSAILKTLRAALDEAGYTEVETPILQSIPGGASARPFITHH 227

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + 
Sbjct: 228 NSLDIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKSHNP-EFTCMELYVQYK 285

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           + + ++   E +L  +    + G     +   I +    R
Sbjct: 286 DYNWMMAFTEKLLERICIAVNGGTESVVDGKTISFKAPYR 325



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 72/228 (31%), Gaps = 24/228 (10%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W  +  +  L  I   ++        G             I   +  + G D       +
Sbjct: 289 WMMAFTEKLLERICIAVNGGTESVVDGKTISFKAPYRRLPILEAIKEKTGYDLNGKSEEE 348

Query: 406 PLKFCSFAADARNHIAQELG---IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
             + C         I   +G   +I+    EFC             E            P
Sbjct: 349 IREICKTLN---LEIDDTMGKGKLIDEIFGEFC-------------EGTYIQPTFITDYP 392

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
                  K +        +++L+ NG E+A+     +      + F       E  ++  
Sbjct: 393 VEMSPLTKKHRSNPALTERFELMVNGKELANAYSELNDPIDQEERFIEQMRLSEKGDDEA 452

Query: 523 GG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                   RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP  +
Sbjct: 453 MFIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFPQMR 500


>gi|212224110|ref|YP_002307346.1| asparaginyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212009067|gb|ACJ16449.1| asparaginyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 430

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 68/309 (22%), Positives = 130/309 (42%), Gaps = 31/309 (10%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSV 65
            C D+     G  V+L+GWV+R R  G  +F+ +RD  GI Q +   +     +  AK V
Sbjct: 6   YCADVRPEMEGKRVKLAGWVYRKREVGKKVFIVLRDSSGIVQTIFKKELSEEAYAEAKKV 65

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + I+G+V +           TG +E+ A KI+++   E  P+     ++  +   
Sbjct: 66  GIESSVIIEGVVKADP------RAPTG-VEVQADKIQVIQNVEFFPIT----KDASDEFL 114

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L L    +   +  +  ++ + R  ++ + + E   PIL   + EG         
Sbjct: 115 LDVRHLHLHSPKVASIMKVKATLMQAAREWLLQDGWYEVFPPILVTGAVEGGATLFKLKY 174

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++  +  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E ++++
Sbjct: 175 FDR--YAYLSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD 231

Query: 246 QDDILNTMENVLRGVF---------------EEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
             DI+   E ++  +                ++ +        F RI YD+AI    +  
Sbjct: 232 LWDIMKVEEELVSYMVQRTLELRRSDIETFRKDLTTLKNTVPPFPRISYDEAIDILQSKG 291

Query: 291 PDLRNPIIM 299
             +     M
Sbjct: 292 VQIEWGEDM 300



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 19/130 (14%)

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN--GFEIASGGIRN 498
           PF+ +             F M +         D   + A   D++      E+  G  R 
Sbjct: 315 PFFVY-----GYPKHIKAFYMKED------PEDPRKVLAA--DMLAPEGYGEVIGGSQRE 361

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + ++Q   + G+  +  E          + G  PH G   G++R+V  +L   +VR 
Sbjct: 362 DDYDKLVQRILDEGMDPKDYE----WYLDLRKYGSVPHSGFGLGLERLVAWVLKLDHVRW 417

Query: 559 VSLFPMSQNF 568
            +LFP + + 
Sbjct: 418 ATLFPRTPSR 427


>gi|22096193|sp|Q8U4D3|SYN_PYRFU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
          Length = 434

 Score =  183 bits (464), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 72/310 (23%), Positives = 133/310 (42%), Gaps = 29/310 (9%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKS 64
            C ++     G  V+L+GWV+     G  IFL IRD  GI Q V   +      FE AK 
Sbjct: 6   YCSEVKPELEGKKVKLAGWVYSNMKVGKKIFLWIRDSTGIVQTVIAKNVVGEEVFEKAKK 65

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E  + ++G+V +            G  E+  +K+E++    E P+P   E+  PE +
Sbjct: 66  LGRESSVIVEGIVKADER-------APGGAEVRVEKLEVIQAVSEFPIPENPEQASPE-L 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              YR L +R       +  +  +I + R  ++ + + E   PIL   + EG        
Sbjct: 118 LLDYRHLHIRTPKASAIMKVKETLIMAAREWLLKDGWHEVFPPILVTGAVEGGATLFKLK 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             ++  +  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E +++
Sbjct: 178 YFDK--YAYLSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWM 234

Query: 245 EQDDILNTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTD 289
           +  DI+   E ++  + +               + +        F RI YD+AI    + 
Sbjct: 235 DLWDIMKVEEELVSYMVQRTLELRKKEIEMFRDDLTTLKNTEPPFPRISYDEAIDILQSK 294

Query: 290 KPDLRNPIIM 299
             +++    +
Sbjct: 295 GINVQWGDDL 304



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 47/130 (36%), Gaps = 19/130 (14%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN--GFEIASGGI 496
           D PF+ +             F M +        ND   + A   D++      EI  G  
Sbjct: 317 DRPFFVY-----GYPKQIKAFYMKED------PNDPRKVLAA--DMLAPEGYGEIIGGSQ 363

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R    E +L      G+  +  E          + G  PH G   G++R+V  +L   ++
Sbjct: 364 REDDYEKLLNRILEEGMDPKDYE----WYLDLRKYGSVPHSGFGLGVERLVAWVLKLDHI 419

Query: 557 REVSLFPMSQ 566
           R  SLFP + 
Sbjct: 420 RWASLFPRTP 429


>gi|282855597|ref|ZP_06264912.1| asparagine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282586580|gb|EFB91833.1| asparagine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 435

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 75/351 (21%), Positives = 122/351 (34%), Gaps = 34/351 (9%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT---QVVANPDSACFEIAKS 64
              DL     G  V + GW++  R  G I FL +RD  G      V        FE AK 
Sbjct: 7   YIKDL-KDHTGESVCVKGWMYNKRSSGKIHFLQLRDGSGTVQGVMVKGEVPDGQFEAAKG 65

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E  L   G+V + S            +EL+   ++IL           G++++    
Sbjct: 66  LWLEASLEATGVVRTDSR-------APSGVELTVTDLKILQ--NPSEEYPIGKKDHGIDF 116

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
               R L LR    +  +  R  II S R       F+   +PILT S  EGA       
Sbjct: 117 LLDTRHLWLRSSRQNALMKIRNEIIWSWRKFFHDRGFMLMDSPILTGSIGEGADGLFELD 176

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             +Q ++ A  Q  Q Y +   A  F + +   P FR E  ++ R   EF+ L+ EM+F 
Sbjct: 177 YFDQKAYLA--QTGQLYAEAA-AMAFGKVYCFGPTFRAEKSKTRRHLTEFWMLEPEMAFY 233

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRRYGT 288
           +    +   E+++    +                           F  + Y DA+++   
Sbjct: 234 DNKMNMQLQEDLVVDTVKNVLAHCEKELAVLERDVEPLEKVVAGPFYHLDYRDAVKKLNE 293

Query: 289 DKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
              D+     +   + T      +  VF +    +          +  G  
Sbjct: 294 LGSDIEFGDDLGADDETVLTRQYDRPVFVENYPKDAKAFYMKANPEDNGET 344



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 61/175 (34%), Gaps = 27/175 (15%)

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEEK 450
           G        D +K  +           +LG  +            ++ ++P     ++ K
Sbjct: 277 GPFYHLDYRDAVKKLNELGS-DIEFGDDLGADDETVLTRQYDRPVFVENYP-----KDAK 330

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                 NP    +   E++  +DLL+ + +         EI  G  R    + +L     
Sbjct: 331 AFYMKANP----EDNGETVVCSDLLAPEGYG--------EIIGGSQREEDYDRLLNRMKE 378

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           + ++       +       + G  PH G   G++R +  + G  ++REV  FP +
Sbjct: 379 LKMNPAD----YDWYLDLRKFGSVPHSGFGIGLERTITWICGLPHIREVIPFPRT 429


>gi|226951466|ref|ZP_03821930.1| lysyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226837759|gb|EEH70142.1| lysyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 508

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 64/309 (20%), Positives = 121/309 (39%), Gaps = 35/309 (11%)

Query: 4   YRTHSCGDLGVSDVGS-----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL                  +V+++G V   R      F+ I+D  G  Q+  
Sbjct: 47  KREHYTADLQEQFKDQDKAQIEGAEKVYVKVAGRVMLNRGS----FIVIQDMTGRIQLYV 102

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +      ++ ++++S  +  I       +AE        G + +  +  E+L+ +   PL
Sbjct: 103 DRKGLPADVLETIKSLDLGDI------IAAEGYIGRSGKGDLYVHLEAFELLTKSLR-PL 155

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA 171
           P           +++ R+LDL  +   +     R +++  +R  +  E F+E  TP++  
Sbjct: 156 PDKFHGLTDTEAKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHV 215

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 A+ F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   +   
Sbjct: 216 IPGGASAKPFVTHHNALDMELY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHN 274

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDD 281
           P EF  ++   ++ +  D++   EN+L  +  +      V            F +I   D
Sbjct: 275 P-EFTMIEFYQAYADYKDLMELTENMLEKLAIDILGTTDVPYGEEVYSFKGPFKKISMFD 333

Query: 282 AIRRYGTDK 290
           AI  +  D 
Sbjct: 334 AILEHNPDF 342



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 5/129 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E K +         P       + ND       +++    G E+A+G    +   
Sbjct: 379 FEETVETK-LRQPTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPI 437

Query: 503 VMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F      K+  ++           A + G+PP  G   GIDR+VML   A ++R+
Sbjct: 438 DQAERFQAQVAEKDAGDDEAMHYDADFIEALEYGLPPTAGEGIGIDRLVMLFANAPSIRD 497

Query: 559 VSLFPMSQN 567
           V LFP  + 
Sbjct: 498 VLLFPHMRR 506


>gi|187250480|ref|YP_001874962.1| lysyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186970640|gb|ACC97625.1| Lysyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 498

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 68/290 (23%), Positives = 123/290 (42%), Gaps = 19/290 (6%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +D+ + V +SG V ++R  G   F  IRD  G  Q  A  D+   E     +    +   
Sbjct: 51  ADIDTQVTVSGRVVQLRLMGKAAFAHIRDFTGKVQFYAQKDTLGEENYNFFKKHISVGD- 109

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
                 + +       TG+  + A  I ++S A   P+P          IRF+ R +DL 
Sbjct: 110 ----FVTVKGHMFLTKTGEKTIKADSITLISKAIR-PMPEKWHGVQDTEIRFRNRHVDLI 164

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            +  + +  VKR++II+S+R  +    ++E  TP LT  +    AR F       +   Y
Sbjct: 165 ANEDIKEIFVKRSKIISSIRKTLDGLGYLEVETPTLTPDAGGAIARPFETFHNALKMPLY 224

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  A + Y + L+  G DR ++I   FR+E   +   P EF  +++  ++ + + + + 
Sbjct: 225 -MRIALELYHKRLIVGGLDRIYEIGKMFRNEGIDTTHNP-EFTMMELYQAYGDVNTMADV 282

Query: 253 MENVLRGVFEEF--------SNGNTVSNNFLRICYDDAIRRY-GTDKPDL 293
            E VL    E               +   + R+   +A ++Y G D  ++
Sbjct: 283 FEAVLANAAEAIGAEKVTFKGKEVNLKPPYERVSMPEAWQKYVGEDIHNI 332



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 64/167 (38%), Gaps = 31/167 (18%)

Query: 418 NHIAQELGI-INCNC-----FEFCW----IMDF--PFYEWNEEEKKIDFAHNPFTMPQGG 465
             +A+ LG+ ++        F+  +    I+++  P    +        A +PF+  + G
Sbjct: 344 IALAKRLGLKVDEEESSGKIFDMIFDERIIVNYTNPMLMMD-----YPTAVSPFSKTKEG 398

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---- 521
                     S    +++    G E+ +     +      Q   +    K          
Sbjct: 399 D---------SAIVERFEAFVCGSELGNAYTEINDPADQAQRLKDQAAQKAKDNEDNSEI 449

Query: 522 -FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                  A + GMPP GG+  GIDR++MLL G  ++RE+  FP+ + 
Sbjct: 450 VDTAYIEALESGMPPTGGMGIGIDRMIMLLTGQDSIREIVFFPLLKK 496


>gi|229496474|ref|ZP_04390189.1| asparaginyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316614|gb|EEN82532.1| asparaginyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 465

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 53/278 (19%), Positives = 105/278 (37%), Gaps = 27/278 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSEWVLCID 74
           +   + + GWV   R +  + F+ + D   I  +    D A F  E+ + + +   L + 
Sbjct: 15  LDQEITVMGWVRTRRGNKAVSFIALNDGSCIHNLQIVADLARFSPEVMQQITTGASLAVR 74

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G +++      +       +EL A++I I    +    P+  +    E +R    +L  R
Sbjct: 75  GTLVASQGAGQS-------VELQAEEITIFGTCDPNSYPLQKKGHSLEFLR-DIAYLRPR 126

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +T    +  R  +  ++      + +    TPI+T+S  EGA      + +N       
Sbjct: 127 TNTFGAILRIRHNMAIAIHEFFHKKGYYYVHTPIITSSDAEGAGQMFRVTTLNLDKLPLN 186

Query: 190 ---------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+  P A     Q +  L A      +   P FR E+  + R   EF+ +
Sbjct: 187 KAGEVDYKKDFFGKPTALTVSGQLEGELAALALGGIYTFGPTFRAENSNTPRHLAEFWMI 246

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           + E++F +  D ++  E   +   +   +       FL
Sbjct: 247 EPEIAFFDVHDNMDLAEEFTKHCVQWALDNCADDLAFL 284



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 67/229 (29%), Gaps = 38/229 (16%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS------FAADARNHIA 421
               + P     ++ +   +                 D L F S           R  +A
Sbjct: 242 EFWMIEPEIAFFDVHDNMDLAEEFTKHCVQWALDNCADDLAFLSEHFDKGLMDRLRFVLA 301

Query: 422 QELGII--------------NCNCFEF--CWIMDFPFYEWNEEEKKIDFAHN---PFTMP 462
                I                + FEF   W +D        E ++     +   P  M 
Sbjct: 302 NSYERITYTQGIEILEKAIAEGHKFEFPVYWGVD-----LASEHERYLVEQHFQKPVIMT 356

Query: 463 QGGME----SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
               E     +K N+          L     EI  G  R    + +      +G+ ++ +
Sbjct: 357 DYPKEIKAFYMKQNEDGKTVRGMDVLFPLIGEIIGGSEREADFDKLRTHAQEMGVPEKDI 416

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                      + G  PH G   G +R+++ + G  N+R+V  FP + N
Sbjct: 417 W----WYLDTRRFGTVPHAGFGLGFERLLLFVTGMSNIRDVIPFPRTPN 461


>gi|308179952|ref|YP_003924080.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|308045443|gb|ADN97986.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 431

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 67/310 (21%), Positives = 115/310 (37%), Gaps = 32/310 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY-GITQVVANPD--SACFEIAKSVRSEWV 70
              V   V++  W+   R  G I FL +RD       V    +     F     +  E  
Sbjct: 10  ADHVNEQVKIGVWLSNKRSSGKIAFLQLRDGTATFQGVALKNELGETAFAQLTDLAQETS 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G + + +             EL+  + E++  + + P+               +R 
Sbjct: 70  LWVTGTIHADTRSPF-------GYELAISQFEVVGTSHDYPITPKDHG---IDFLLDHRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    +  +  R  +I ++        FI+   PILT S+PEG  +        Q +
Sbjct: 120 LWLRSSRPNAIMRIRNEVIRAVYEFFNDRGFIKIDAPILTGSAPEGTTELFKTDYFGQDA 179

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y     A  F + F   P FR E  ++ R   EF+QL+ EM+++ QD+ L
Sbjct: 180 Y--LSQSGQLY-GEAGAMAFGKIFTFGPTFRAEKSKTRRHLTEFWQLEPEMAWMHQDESL 236

Query: 251 NTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRRYGTDKPDLR 294
              E ++  + +   +                       F R+ YDDAI     +  D+ 
Sbjct: 237 EVQEQLVAYLVQAVIDHCPHELAVLDRDVATLQKYTKLPFPRVLYDDAITLLQANGFDVD 296

Query: 295 NPIIMHNVTE 304
             +   +  E
Sbjct: 297 WGVDFGSPEE 306



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 48/143 (33%), Gaps = 7/143 (4%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDL 484
           ++  N F+  W +DF   E     +  D        P+      ++ +          DL
Sbjct: 287 LLQANGFDVDWGVDFGSPEETFLAEHFDQPVFVLNYPKAIKAFYMQAHPTRDDVVIAADL 346

Query: 485 VCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           +      EI  G  R+   + + +     G   +  E          + G  PH G   G
Sbjct: 347 LAPEGYGEIIGGSERSTDYDYLKERLLASGQDLQDYE----WYLDLRKYGSVPHSGFGMG 402

Query: 543 IDRIVMLLLGAKNVREVSLFPMS 565
           ++R +  +    +VRE   FP  
Sbjct: 403 LERFLTWITLQDHVRETIPFPRM 425


>gi|293389907|ref|ZP_06634241.1| asparaginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290950441|gb|EFE00560.1| asparaginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 467

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 124/388 (31%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D A +E     + +   + 
Sbjct: 17  IGEKVTVRGWVRTRRDSKAGLSFLAVYDGSCFAPIQTIVNNDIANYESEVLRLTAGCSVV 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   AE          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGTVVESPAEGQA-------VELQAEKVEVTGWVEDPETYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RTDKGAVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-------------------- 275
            ++ E++F    D     E++L+ VF            F                     
Sbjct: 250 MIEPEVAFATLADNAKLAEDMLKYVFRAVLAERRDDLEFFAKHVDGDVINRLERFINSDF 309

Query: 276 -RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            ++ Y DAI            P+   +   +EH  +     F   + V    +       
Sbjct: 310 AQVDYTDAIEILLKSGKTFEFPVSWGIDLSSEHERYLAEDYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+ +  + +G++       +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDKRMAEMGLNP----EDYWWYRDLRR 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 427 YGTVPHSGFGLGFERLIVYVTGLQNIRDVIPFPRAPR 463


>gi|229029921|ref|ZP_04185990.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228731429|gb|EEL82342.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 428

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 70/279 (25%), Positives = 126/279 (45%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C        G  V L GWV ++R  G + FL IRD  G+ Q V   + A F+
Sbjct: 1   MKRSLTKEC----KKQSGKVVLLQGWVKKIRHLGNVSFLLIRDRSGVMQCVLENELAGFK 56

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
           +           + G ++  S   +        +E+ A +++IL+ AE LP  +  ++  
Sbjct: 57  VDVESVV----QVVGQIVETSKTEL-------GVEVLAHEVKILNGAEPLPFEINKKKLQ 105

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L LR +        ++ ++ S    ++  +F    TP + +   EG  +
Sbjct: 106 VGLDQLLNERVLSLRHERTEAIFKVKSTLVQSFSEFLVENDFTRIFTPKIVSQGAEGGAN 165

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F++AP +R E   S R   E+  LD+
Sbjct: 166 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEVAPVYRAEHHNSSRHLNEYISLDV 223

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +         L+I
Sbjct: 224 ELGFIHDFYEVMQLETDVLRYMFQQVAKNCEKELQLLQI 262



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 63/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  E  +I  +P             A   +TMP     S+  
Sbjct: 293 GDLDTEGEKLLGKYVKETYKSELVFITHYP-----------KGARPMYTMPNKENSSITD 341

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ 
Sbjct: 342 S---------FDLLYKGLEITSGAQRIHDYEMLLASFKEKGLHP----DKFQSYLNTFRY 388

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++RIV  LL   N+RE S FP  
Sbjct: 389 GCPPHGGFGIGLERIVYKLLELTNIREASAFPRD 422


>gi|206602452|gb|EDZ38933.1| Lysyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 507

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 18/251 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLCIDGLV 77
           R++G V  +R  G   F  ++D  G  Q+    D    E    +A+++     L +DG+ 
Sbjct: 69  RIAGRVVLLRRFGKAFFATLQDASGRFQIYVRKDHIGEEPYALLAETLDIGDHLGVDGIF 128

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                        TG+  L A  +  L  +   PLP           R++ R++DL  + 
Sbjct: 129 ---------FRTKTGEPTLDASHVTFLGKS-VHPLPEKWHGLTDIEQRYRQRYIDLIVNP 178

Query: 138 LHKNIVKRT-RIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALP 195
             +++  R  +I+ S+R  M    F+E  TP++  S     AR F+          Y L 
Sbjct: 179 DARDVFVRRGKILGSIRRFMEDRGFMEVETPMMHPSPGGALARPFVTHHNALDVDLY-LR 237

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + LM  GFD  F+I   FR+ +  S R   EF  ++  M++   +D++   E+
Sbjct: 238 IAPELYLKRLMVGGFDLVFEINRNFRN-EGFSPRHNPEFTMMEFYMAYHSPEDLMALTES 296

Query: 256 VLRGVFEEFSN 266
           +   +  E   
Sbjct: 297 LFERLAREIHG 307



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E  E EK +         P+      + +        +++L   G EIA+G +  +  
Sbjct: 378 LFE-EEIEKTLIQPTFVTGYPRSISPLARSSREDPEITDRFELFVAGVEIANGFMELNDP 436

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           +  L+ F +   S+   +           RA + G+PP  G   GIDR+VMLL    ++R
Sbjct: 437 DEQLRRFLSQQESRNSGDLEAPPPDMDYIRALEIGLPPTAGEGIGIDRLVMLLTNQHSIR 496

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 497 DVLLFPQMR 505


>gi|119193865|ref|XP_001247536.1| lysyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
 gi|303311735|ref|XP_003065879.1| Lysyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240105541|gb|EER23734.1| Lysyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320039790|gb|EFW21724.1| lysyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 609

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 112/256 (43%), Gaps = 15/256 (5%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLC 72
             +R++G ++  R  G  +IF DIR      QV         D       + +R   ++ 
Sbjct: 128 KEIRIAGRIYTKRSSGAKLIFYDIRAEGVKVQVACQAQETTSDVPFEAQHEHLRRGDIIG 187

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G        T   N   G++ + A+++ +L+      +P        +  RF+ R+LD
Sbjct: 188 IIGF----PGRTSPKNRDDGELSIFAKQVILLTPCL-HQIPSEHYGFKDQEQRFRQRYLD 242

Query: 133 LRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +       + R++II+ +R      +F+E  TP++ A +    A+ F+        +
Sbjct: 243 LIMNDKSRNVFITRSKIISYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHHNELDMN 302

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + +  AP+ Y ++L+  G +R +++   FR+E       P EF   +   ++ +  D++
Sbjct: 303 LF-MRIAPELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTTCEFYWAYADVYDLM 360

Query: 251 NTMENVLRGVFEEFSN 266
           N  E ++ G+ +  + 
Sbjct: 361 NVTEELVSGLVKHVTG 376



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 4/91 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++      EI +     +        F      K+  ++           + + G
Sbjct: 488 GLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQARQKDQGDDEAQLIDENFCTSLEYG 547

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +PP GG   GIDR+VM L    +++EV  FP
Sbjct: 548 LPPTGGWGLGIDRLVMFLTDNYSIKEVLAFP 578


>gi|161344750|ref|NP_442773.2| asparaginyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|20141643|sp|P52276|SYN_SYNY3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
          Length = 462

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 70/386 (18%), Positives = 130/386 (33%), Gaps = 49/386 (12%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M++ R      L        V + GW+   R      F+++ D   +  +    D +  +
Sbjct: 1   MNKRR--IIEVLRHGQADDQVMVQGWLRTKRTLKDFSFVEVNDGSSLANLQVVLDGSLAD 58

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +         G  +    +   +     ++EL A K+E+L  A+    P+  +R  
Sbjct: 59  YDRLL----SQLQTGAALVVEGKLAPSPGKGQRVELKATKLELLGGADPGSYPLQKKRHS 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R     L  R +T+   +  R     ++        F+   TPI+TAS  EGA D 
Sbjct: 115 FEFLR-TIGHLRPRTNTIGAVMRVRNACATAIHQFFQERGFLWVHTPIITASDCEGAGDL 173

Query: 181 LVPSRVNQG-------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
              + ++                F+   A      Q +  +MA  F   +   P FR E+
Sbjct: 174 FKVTTLDLQRVPKNGEGIDYSQDFFGKQAYLTVSGQLEAEVMALAFQNVYTFGPTFRAEN 233

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------- 271
             + R   EF+ ++ EM+F + +      E  L+ +F+                      
Sbjct: 234 SNTSRHLAEFWMVEPEMAFCDLEGDRQWAEEFLKYIFKFVLEKCPEDMEFFDQRIDNTVL 293

Query: 272 --------NNFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVN 321
                   N F  + Y +AI+           P+       +EH  +    VF +   V 
Sbjct: 294 ATADNIINNEFAWLTYSEAIKLLEKADQKFEYPVAWGVDLQSEHERYLAETVFKRPTIVT 353

Query: 322 ---PGYEVWAIPAKGGGGNRAFCDRM 344
                 + + +     G   A  D +
Sbjct: 354 DYPKDIKAFYMRLNDDGKTVAAMDIL 379



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 4/95 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    L     EI  G  R    +++ Q     G+     E          + 
Sbjct: 367 NDDGKTVAAMDILAPKIGEIIGGSQREERLDILTQRMQEQGVP----EEDLWWYLDLRRY 422

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G  PH G   G +RIV  + G  N+R+V  FP + 
Sbjct: 423 GSVPHAGFGLGFERIVQFMTGMANIRDVIPFPRTP 457


>gi|307298991|ref|ZP_07578793.1| lysyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915416|gb|EFN45801.1| lysyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 501

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 69/339 (20%), Positives = 127/339 (37%), Gaps = 21/339 (6%)

Query: 5   RTHSCGDL---------GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           +TH    +           +   + +  +G V  VR HG   F  +RD+    Q     D
Sbjct: 30  KTHWAAQIKSEFAYLQNSETKEDTVLSTAGRVVAVRNHGKSSFFVLRDNSDRIQAYIRLD 89

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E  +  +    +           +       TG+I +  ++ EILS +  +  P  
Sbjct: 90  GVGAESFEVFKKYVNIGD-----FVGVKGFPFKTHTGEISVFVKEFEILSKSIRMM-PEK 143

Query: 116 GEREYPESIRFKYRFL-DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                 + I ++ R++  L  D   K    R+ +   +R  + ++NF+E  TP+L   + 
Sbjct: 144 WHGVKDKEIIYRQRYVEMLSSDDALKRFKIRSELFRLVREFLQSKNFVEVDTPMLHYLTG 203

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F     V +   Y L  A + + +  +  GF+R F+I   FR+E       P E
Sbjct: 204 GASARPFKTHINVFESDMY-LRIAEELFLKRYLVGGFERIFEIGKNFRNEGVSYKHHP-E 261

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  +++  ++ + +DI+N  E ++  V  E +    +S     I +    RR      D 
Sbjct: 262 FTMMELYWAYADYNDIMNITEEMINFVVREIAGSEIISYQGKEIDFSRPWRR--VKMADF 319

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
               +  ++ E        V  K  +     E   +  K
Sbjct: 320 IKENLGVDILEDSDDRMMAVLKKHNTEPEIKERGHLIEK 358



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 59/152 (38%), Gaps = 26/152 (17%)

Query: 417 RNHIAQEL-GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           R H+ ++L  ++  N     ++ +                 +P  +        + +   
Sbjct: 352 RGHLIEKLWDLVEHNLVNPTFVTE-----------------HPVIISPLSKVHREDS--- 391

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV----GISKEVVENRFGGLYRAFQC 531
                +++L+ +  E+A+     +        F +      I  E  +       RA + 
Sbjct: 392 -RVTERFELIISSMEMANAFSELNDPIEQYNRFLHQAGLRDIGDEEAQMMDHDFIRALEY 450

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP GG+  G DRI+ML+  + ++R++  FP
Sbjct: 451 GMPPTGGLGVGWDRIIMLVTDSPSIRDIIPFP 482


>gi|18976527|ref|NP_577884.1| asparaginyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|18892078|gb|AAL80279.1| asparaginyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 437

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 72/310 (23%), Positives = 133/310 (42%), Gaps = 29/310 (9%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKS 64
            C ++     G  V+L+GWV+     G  IFL IRD  GI Q V   +      FE AK 
Sbjct: 9   YCSEVKPELEGKKVKLAGWVYSNMKVGKKIFLWIRDSTGIVQTVIAKNVVGEEVFEKAKK 68

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E  + ++G+V +            G  E+  +K+E++    E P+P   E+  PE +
Sbjct: 69  LGRESSVIVEGIVKADER-------APGGAEVRVEKLEVIQAVSEFPIPENPEQASPE-L 120

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              YR L +R       +  +  +I + R  ++ + + E   PIL   + EG        
Sbjct: 121 LLDYRHLHIRTPKASAIMKVKETLIMAAREWLLKDGWHEVFPPILVTGAVEGGATLFKLK 180

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             ++  +  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E +++
Sbjct: 181 YFDK--YAYLSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWM 237

Query: 245 EQDDILNTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTD 289
           +  DI+   E ++  + +               + +        F RI YD+AI    + 
Sbjct: 238 DLWDIMKVEEELVSYMVQRTLELRKKEIEMFRDDLTTLKNTEPPFPRISYDEAIDILQSK 297

Query: 290 KPDLRNPIIM 299
             +++    +
Sbjct: 298 GINVQWGDDL 307



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 47/130 (36%), Gaps = 19/130 (14%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN--GFEIASGGI 496
           D PF+ +             F M +        ND   + A   D++      EI  G  
Sbjct: 320 DRPFFVY-----GYPKQIKAFYMKED------PNDPRKVLAA--DMLAPEGYGEIIGGSQ 366

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R    E +L      G+  +  E          + G  PH G   G++R+V  +L   ++
Sbjct: 367 REDDYEKLLNRILEEGMDPKDYE----WYLDLRKYGSVPHSGFGLGVERLVAWVLKLDHI 422

Query: 557 REVSLFPMSQ 566
           R  SLFP + 
Sbjct: 423 RWASLFPRTP 432


>gi|150018414|ref|YP_001310668.1| lysyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149904879|gb|ABR35712.1| lysyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 508

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 74/328 (22%), Positives = 133/328 (40%), Gaps = 12/328 (3%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           C +    D      L+G +  +R  G   F +I D  G  Q+  +      E    ++  
Sbjct: 56  CDNFDTIDESKVFSLAGRIMFLRRMGNATFANIVDERGNIQIFFSKKLIGSENYNVLKLI 115

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V  I G+      E       TG+I + A K E+LS +    LP          +R ++
Sbjct: 116 DVGDIVGV------EGTVFKTQTGEITIRANKFELLSKSIR-TLPEKYHGIQDSDLRQRH 168

Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRV 186
           R LD+  ++ + +  +KR++ I ++R  +   NFIEC TP+L T      A+ F      
Sbjct: 169 RSLDMIMNSDVKERFIKRSKAITAIREYLNNMNFIECDTPVLDTKYGGGEAKPFKTFVND 228

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  +P+ Y + L+  G +R +  A  FR+E       P EF  ++  MS+ + 
Sbjct: 229 LDCEVY-MNVSPELYLKRLIVGGIERVYTFARSFRNEGIDRTHYP-EFTLMECYMSYADY 286

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-PDLRNPIIMHNVTEH 305
           +D++  ME +   VF   +    +      I +    +R            I + N+T+ 
Sbjct: 287 EDMMRIMEGIYEHVFMSVNGSTKIKYGEEEIDFKAPWKRETMCNLVKQDTGIDVENLTKE 346

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKG 333
            + S+ +  S ++            +KG
Sbjct: 347 EIISKIKENSLLIEEQNEGLNINEASKG 374



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 52/147 (35%), Gaps = 31/147 (21%)

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                +  +++DFP     +E   +   H             +  DL      +++    
Sbjct: 386 EKKLIQPTFVIDFP-----KESSPLCKVHR------------ENPDL----IERFEPYAY 424

Query: 488 GFEIASGGIRNHMS-------EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           G E+ +     +             +       +   ++  F     A    MPP GG+ 
Sbjct: 425 GVELGNAYSELNDPLRQRILLHDQAEKLRGGLETASPMDEEFAI---AIDTAMPPTGGLG 481

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            GIDR++M L G+  +++V  FP+ + 
Sbjct: 482 IGIDRMIMFLTGSNTIKDVIAFPLVKR 508


>gi|282881979|ref|ZP_06290620.1| asparagine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281298009|gb|EFA90464.1| asparagine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 461

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 125/375 (33%), Gaps = 51/375 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIAKSVRSEWV 70
             + +   + + GW+   R      F+++ D      +      +   F   +       
Sbjct: 11  TENYIDKEIEICGWIKTNRGSKNFGFIELTDGTNFNSLQVVYGKELGNFSEIEKYTLSSS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L I G ++                EL A++I+++  A+    P+  +R   E +R     
Sbjct: 71  LIIKGKLVESPG-------ANQSFELQAKEIKLIGAAD-NTYPLQKKRHTMEYLRTVS-H 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +T +     R+ I  ++        F+    PI+TAS  EGA +    + +    
Sbjct: 122 LRPRTNTFNAVFRVRSLIAYAIHKFFQERGFVYFHAPIITASDAEGAGEMFQVTTLPLED 181

Query: 191 FYALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                +    YK+                    A  F   +   P FR E+  + R   E
Sbjct: 182 IPKNDEGKVDYKKDFFGKETNLTVSGQLEDEAFALAFGNVYTFGPTFRAENSNTPRHAAE 241

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSN 272
           F+ ++ EM+F + +  ++  E +L+ +                            N VSN
Sbjct: 242 FWMIEPEMAFADLNVNMDVAEAMLKYIIRYVLENAKEEMKFFNKFIDKDLLARLDNVVSN 301

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
            F RI Y  AI        D + P+   +   TEH  +    VF K + V    +     
Sbjct: 302 EFERITYTQAIEILEKANKDFKFPVKWGIDLQTEHERYITEEVFKKPVFVTNYPKEIKAF 361

Query: 331 AKGGGGNRAFCDRMN 345
                 ++     M+
Sbjct: 362 YMTENDDKKTVAAMD 376



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 27/141 (19%)

Query: 427 INCNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           I    F+   ++ ++P     +E K        F M +                   DL+
Sbjct: 340 ITEEVFKKPVFVTNYP-----KEIK-------AFYMTENDD---------KKTVAAMDLL 378

Query: 486 CNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
             G  EI  G  R H  +++ +   ++ ++     + +       + G   H G   G +
Sbjct: 379 VPGVGEIIGGSQREHRIDILEKKMKDLNMNM----DEYDWYLDLRRFGTCIHSGYGLGFE 434

Query: 545 RIVMLLLGAKNVREVSLFPMS 565
           R VM + G KN+R+V  FP +
Sbjct: 435 RAVMYITGMKNIRDVIPFPRT 455


>gi|288572810|ref|ZP_06391167.1| lysyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288568551|gb|EFC90108.1| lysyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 503

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 63/357 (17%), Positives = 130/357 (36%), Gaps = 31/357 (8%)

Query: 7   HSCGDLGVSDVGSFV---------RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           H+  ++        V          ++G +  VR  G   F +++D  G  Q+    DS 
Sbjct: 44  HTLAEVRRDHDDISVDESREDVSLSVAGRLMTVRKQGKASFANMQDETGSMQLYFRLDSM 103

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E  +  +        G ++    E        G++ ++  +  +LS A   PLP    
Sbjct: 104 GEECYRFFKKW---IDAGDIIGV--EGHPFRTRRGELTIAVTRCVLLSKALR-PLPEKWH 157

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPE 175
                 +R++ R++DL  +   +++ + R RII+S+R  +     +E  TP+L+  +   
Sbjct: 158 GLTDTEVRYRKRYVDLMVNPEVRDVFRQRARIISSVRKTLEDHGTLEVETPMLSYLAGGA 217

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+          Y L  A + + + L+     R +++   FR+E   +   P EF 
Sbjct: 218 NARPFVTHHNALDLDMY-LRIATELHLKRLVVGMMGRVYEMGKNFRNEGMDAMHNP-EFT 275

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            +++   + +  D+++  E ++R    + +   TV+     +      RR          
Sbjct: 276 AMEVYWPYCDYVDMMDLTEEIVRKAALDATGSTTVTWQGTELDLGKPFRR---------- 325

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-NEWARSQ 351
              M  + +     +F             E   +  +G          M  E+    
Sbjct: 326 -ATMVELVKEHCGVDFDGIDDDNEARRIAEGEGLALEGDESRFKVLTMMVEEFVEEH 381



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
             E   EE  +          +    S +  D       +++L   G E+A+G    +  
Sbjct: 373 MVEEFVEEHLVQPTFVMGHPTEISPLSKRNPD-NPDYTHRFELFVCGSEVANGFSELNDP 431

Query: 502 EVMLQAFSNVGISKEVVENR----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F +    K   +            A + G+PP GG+  GIDR++M L  ++++R
Sbjct: 432 IDQRARFEDQAKLKAAGDEEGHPFDEDFVNALEQGLPPTGGLGIGIDRLIMFLTDSRSIR 491

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 492 DVILFPTMK 500


>gi|213852475|ref|ZP_03382007.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 466

 Score =  183 bits (464), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 125/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V   V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDQEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEEV----LHLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A K+E+    E         + +      +   L  R 
Sbjct: 72  CSVVVTGKVVASPGQGQSFEIQATKVEVAGWVENPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++  +     
Sbjct: 132 NLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 196 QA-----------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           Q                    Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + +D     E +L+ VF+                            VS +F ++
Sbjct: 252 PEVAFADLEDNARLAEAMLKYVFKAVLEERADDMKFFAERVDKDAIARLERFVSTDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVAILERCGKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|20139921|sp|Q9CN06|SYN_PASMU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
          Length = 467

 Score =  183 bits (464), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 128/388 (32%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFEI-AKSVRSEWVLC 72
           +G  V + GW+   R    G+ FL I D       Q + N D   +E     + +   + 
Sbjct: 17  IGETVTVRGWIRTRRDSKAGLSFLAIYDGSCFDPIQAIVNNDIENYETEVLRLTTGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   AE          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGTVVESPAEGQA-------VELQAEKVEVAGWVEDPETYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RDDKGAVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           N ++++F
Sbjct: 250 MVEPEIAFATLADNAKLAEDMLKYVFRAVLEERKDDLKFFEKHVDNDVISRLENFINSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH  +     F   + V    +       
Sbjct: 310 AQIDYTDAIEVLLQSGKKFEFPVSWGIDLSSEHERYLAEEHFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 71/221 (32%), Gaps = 37/221 (16%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL-DMQDGDSCFFIAGDPLKFCSFAA 414
           L Y+F  + E           K         +  RL +  + D       D ++    + 
Sbjct: 271 LKYVFRAVLEERKDD-----LKFFEKHVDNDVISRLENFINSDFAQIDYTDAIEVLLQSG 325

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM----PQGGMES-- 468
                            F   W +D      + E ++     +  +              
Sbjct: 326 -------------KKFEFPVSWGID-----LSSEHERYLAEEHFKSPVVVKNYPKDIKAF 367

Query: 469 -LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
            ++ ND     A   D++  G  EI  G  R    +V+ +    +G++       +    
Sbjct: 368 YMRLNDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDKRMIEMGLNP----EDYWWYR 422

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              + G  PH G   G +R+++ + G +N+R+V  FP S  
Sbjct: 423 DLRRYGTVPHAGFGLGFERLIVYVTGVQNIRDVIPFPRSPR 463


>gi|294650990|ref|ZP_06728330.1| lysine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292823091|gb|EFF81954.1| lysine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 508

 Score =  183 bits (464), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 64/309 (20%), Positives = 121/309 (39%), Gaps = 35/309 (11%)

Query: 4   YRTHSCGDLGVSDVGS-----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL                  +V+++G V   R      F+ I+D  G  Q+  
Sbjct: 47  KREHYTADLQEQFKDQDKAQIEGAEKVYVKVAGRVMLNRGS----FIVIQDMTGRIQLYV 102

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +      ++ ++++S  +  I       +AE        G + +  +  E+L+ +   PL
Sbjct: 103 DRKGLPVDVLETIKSLDLGDI------IAAEGYIGRSGKGDLYVHLEAFELLTKSLR-PL 155

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA 171
           P           +++ R+LDL  +   +     R +++  +R  +  E F+E  TP++  
Sbjct: 156 PDKFHGLTDTEAKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHV 215

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 A+ F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   +   
Sbjct: 216 IPGGASAKPFVTHHNALDMELY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHN 274

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDD 281
           P EF  ++   ++ +  D++   EN+L  +  +      V            F +I   D
Sbjct: 275 P-EFTMIEFYQAYADYKDLMELTENMLEKLAIDILGTTDVPYGEEVYSFKGPFKKISMFD 333

Query: 282 AIRRYGTDK 290
           AI  +  D 
Sbjct: 334 AILEHNPDF 342



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 5/129 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E K +         P       + ND       +++    G E+A+G    +   
Sbjct: 379 FEETVETK-LRQPTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPI 437

Query: 503 VMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F      K+  ++           A + G+PP  G   GIDR+VML   A ++R+
Sbjct: 438 DQAERFQAQVAEKDAGDDEAMHYDADFIEALEYGLPPTAGEGIGIDRLVMLFANAPSIRD 497

Query: 559 VSLFPMSQN 567
           V LFP  + 
Sbjct: 498 VLLFPHMRR 506


>gi|254884797|ref|ZP_05257507.1| asparaginyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|319644141|ref|ZP_07998666.1| asparaginyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|254837590|gb|EET17899.1| asparaginyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|317384263|gb|EFV65234.1| asparaginyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 467

 Score =  183 bits (464), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/295 (21%), Positives = 109/295 (36%), Gaps = 29/295 (9%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F
Sbjct: 1   MEKISRTKIVDLLKRRDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLANF 60

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+ K + +   + ++G +         A       E+ A+ IE+L   +    P+  +
Sbjct: 61  DEEMLKQITTGACISVNGELTESIGSGQAA-------EVQARGIEVLGTCD-NTYPLQKK 112

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R +   L  R +T       R  +  ++        F    TPI+TAS  EGA
Sbjct: 113 GHTMEFLR-EIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPIITASDCEGA 171

Query: 178 RDFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
                 +  N                 F+    +     Q +  L A+     +   P F
Sbjct: 172 GQMFQVTTKNLYDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F +  D ++  E+ ++   +   +       FL
Sbjct: 232 RAENSNTPRHLAEFWMIEPEVAFNDITDNMDLAEDFIKYCVQWALDNCYDDVKFL 286



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 59/151 (39%), Gaps = 18/151 (11%)

Query: 426 IINCNCFEF--CWIMDFPFYEWNEEEKKIDFAHN----PFTMPQGGMESL---KGNDLLS 476
           ++  + FEF   W +D      +E E+ +   H       T     +++    +  D  +
Sbjct: 322 VVKGHKFEFPVYWGVDL----ASEHERYLVEEHFKRPVILTDYPKEIKAFYMKQNEDGKT 377

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A    L     EI  G  R    + ++     +GI  + +           + G  PH
Sbjct: 378 VRAMDV-LFPKIGEIIGGSEREADYDKLMTRIQELGIPMKDMW----WYLDTRKFGSCPH 432

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R+++ + G  N+R+V  FP +  
Sbjct: 433 SGFGLGFERLLLFVTGMTNIRDVIPFPRTPR 463


>gi|238749748|ref|ZP_04611253.1| Asparaginyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238712403|gb|EEQ04616.1| Asparaginyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 463

 Score =  183 bits (464), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 70/424 (16%), Positives = 139/424 (32%), Gaps = 50/424 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSE 68
           G + V S V + GWV   R    GI F+ + D      + A  ++      +    + + 
Sbjct: 9   GRAAVDSEVTVRGWVRTRRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTTG 68

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G V++   E  +        E+ A  I+++   ++        + +      + 
Sbjct: 69  CSVEVTGTVVASPGEGQS-------FEIQATAIKVVGWVDDPDTYPMAAKRHSIEYLREV 121

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R + +      R  +  ++        +   STP++TAS  EGA +    S ++ 
Sbjct: 122 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 181

Query: 189 --------------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q      A    + +   P FR E+  + R  
Sbjct: 182 ENIPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHL 241

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTD 289
            EF+ ++ E++F   DD+    E +L+ VF+   N       F   R+  D   R     
Sbjct: 242 AEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERVDKDAVDRLQRFV 301

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKI------------LSVNPGYEVWAIPAKGGGGN 337
             D    +   +  E  + S  +  + +                  ++   +        
Sbjct: 302 TSDFAQ-VDYTDAIEILLASGQKFENDVSWGIDLSSEHERYLAEQHFKAPVVVKNYPKDI 360

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           +AF  RMNE        G       +   G    +G   +   +   +A    + +   D
Sbjct: 361 KAFYMRMNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKED 413

Query: 398 SCFF 401
             ++
Sbjct: 414 YWWY 417



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 14/111 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M           D  ++ A   D++  G  EI  G  R    +V+    + +G++K 
Sbjct: 362 AFYMRMNE-------DGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARLAEMGLNK- 411

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 412 ---EDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRTPR 459


>gi|251789278|ref|YP_003003999.1| asparaginyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247537899|gb|ACT06520.1| asparaginyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 466

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 129/385 (33%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI F+ + D      + A  ++        V    +    G
Sbjct: 16  VDSDVTVRGWVRTRRDSKAGISFIAVYDGSCFDSLQAVVNNNLANYQSDV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL A +++++   E+        + +      +   L  R 
Sbjct: 72  CSVEVTGKVVESPGEGQSFELQATELKVVGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++        F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQAIHRFFHQSGFYWVSTPLITASDTEGAGEMFRVSTLDLENLPRDD 191

Query: 189 -------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 QGKVDFSEDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMIE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   DDI    EN+L+ VF+                            VS++F+++
Sbjct: 252 PEVAFATLDDIAALAENLLKFVFKAVLEERADDMKFFAERVDKDAVSRLERFVSSDFVQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI           NP+   +   +EH  +   + F   + V    +          
Sbjct: 312 DYTDAITILENCGQTFENPVSWGIDLSSEHERYLAEKHFQAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRMNSDGKTVAAMDVLAPGIGEII 391



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 42/122 (34%), Gaps = 5/122 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    E +   
Sbjct: 347 EKHFQAPVVVKNYPKDIKAFYMRMNSDGKTVAAMDVLAPGIGEIIGGSQREERLEQLDIR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              +G+SK      +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 407 LEEMGLSK----EDYWWYRDLRRYGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462

Query: 568 FC 569
             
Sbjct: 463 SA 464


>gi|294634836|ref|ZP_06713359.1| lysine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291091772|gb|EFE24333.1| lysine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 418

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/318 (22%), Positives = 129/318 (40%), Gaps = 29/318 (9%)

Query: 41  IRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQK 100
           ++D  G  Q+    D    ++      +W L   G ++    +       TG++ +    
Sbjct: 1   MQDMGGRIQLYIARDDLKDDVYSEQFKKWDL---GDIIGARGKLF--RTQTGELSIHCHS 55

Query: 101 IEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAE 159
           I +L+ A   PLP        +  R++ R+LDL  +   +   + R++I+ ++R  M+ +
Sbjct: 56  IRLLTKALR-PLPDKFHGLADQETRYRQRYLDLIANESSRETFRTRSKILAAIRNFMVNK 114

Query: 160 NFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
            F+E  TP++        AR F+          Y L  AP+ Y + L+  GF+R F+I  
Sbjct: 115 GFMEVETPMMQVIPGGASARPFITHHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINR 173

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
            FR+E   S R   EF  +++ M++ +  D++   E + R + ++               
Sbjct: 174 NFRNEGV-SPRHNPEFTMMELYMAYADYKDLIVLTEELFRTISQDVLG------------ 220

Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA-----IPAKG 333
              ++ +YG    D   P I  ++ E   H    + S  L         A        K 
Sbjct: 221 --SSVVQYGDQTFDFSKPFIKMSMKEAICHYRPDIASADLDDMEKACKIAESLGIKIEKS 278

Query: 334 GGGNRAFCDRMNEWARSQ 351
            G  R  C+  +E A SQ
Sbjct: 279 WGLGRVQCEIFDETAESQ 296



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 68/195 (34%), Gaps = 18/195 (9%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE--LGIINCNCFEFC 435
                   +++  +     D       D  K C  A      I +   LG + C  F+  
Sbjct: 233 FSKPFIKMSMKEAICHYRPDIASADLDDMEKACKIAESLGIKIEKSWGLGRVQCEIFD-- 290

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
                        E ++         P       + ND       +++    G EI +G 
Sbjct: 291 ----------ETAESQLIQPTFITEYPAEVSPLARRNDENPFITDRFEFFIGGREIGNGF 340

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLL 551
              + +E   + F +   +K+  ++           A + G+PP  G+  GIDR++ML  
Sbjct: 341 SELNDAEDQAERFQDQVKAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGVGIDRMMMLFT 400

Query: 552 GAKNVREVSLFPMSQ 566
            +  +R+V LFP  +
Sbjct: 401 NSHTIRDVILFPAMR 415


>gi|224536212|ref|ZP_03676751.1| hypothetical protein BACCELL_01079 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522155|gb|EEF91260.1| hypothetical protein BACCELL_01079 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 467

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/295 (21%), Positives = 111/295 (37%), Gaps = 29/295 (9%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F
Sbjct: 1   MEKISRTKIVDVLKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQVVVDLANF 60

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+ K + +   L ++G +         A       E+ A++IE+L   +    P+  +
Sbjct: 61  DEEMLKDITTGACLSVNGELTESVGSGQKA-------EIQAREIEVLGTCD-NTYPLQKK 112

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R +   L  R +T       R  +  ++      + F+   TPI+TAS  EGA
Sbjct: 113 GHTLEFLR-EIAHLRPRTNTFGAVFRIRHNMAIAIHTFFHQKGFVYFHTPIITASDCEGA 171

Query: 178 RDFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
                 +  N                 F+    +     Q +  L A+     +   P F
Sbjct: 172 GQMFQVTTKNLYDLKKDEAGSIIYDDDFFGKQTSLTVSGQLEGELAATALGAIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F +  D ++  E  ++   +   +       FL
Sbjct: 232 RAENSNTPRHLAEFWMVEPEVAFNDITDNMDLAEEFIKFCVKWALDNCADDVKFL 286



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P     +E K        F M Q         D  +++A  
Sbjct: 342 HERYLVEEHFKRPVILTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 382

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R    + ++     + I  + +           + G  PH G   
Sbjct: 383 V-LFPKIGEIIGGSERESDYDKLMTRIDEMHIPMKDMW----WYLDTRRFGTCPHSGFGL 437

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G  N+R+V  FP +  
Sbjct: 438 GFERLLLFVTGMANIRDVIPFPRTPR 463


>gi|257437983|ref|ZP_05613738.1| asparagine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257199643|gb|EEU97927.1| asparagine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 462

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/373 (19%), Positives = 124/373 (33%), Gaps = 54/373 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWVLCID 74
           G+ V + GW   +R    I F+ + D      +    ++      + V        L I 
Sbjct: 17  GTVVTVCGWAKNIRDSKNIGFIALSDGGCFKTLQVVLEAGKLANYEEVIHTGLYSSLRIV 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++                EL+A  +EIL        P+  ++   E +R     L  R
Sbjct: 77  GRIVLTPQ-------AKQPFELNADSVEILGDCPADEYPLQKKKMSMEYLR-TMPTLRPR 128

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +T +     R+    ++        FI   +P+LTAS  EGA +    + ++       
Sbjct: 129 TNTFNAAFRVRSVAAYAIHKFFQENGFIYSHSPLLTASDCEGAGEMFQVTTLDLQNVPKN 188

Query: 190 ---------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+  P       Q +   MA  F + +   P FR E   + R   EF+ +
Sbjct: 189 EDGTVDYSQDFFEKPVNLTVSGQLEAEAMAMAFGKVYTFGPTFRAEKSFTTRHAAEFWMI 248

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + EM+F +    ++T E + + V     +       F                      R
Sbjct: 249 EPEMAFCDLKGYMDTAEAMTKFVICYVLDNCPDEMAFFNQFIDKGLIERLELVANSEFGR 308

Query: 277 ICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVN---PGYEVWAIPA 331
           I Y +AI     +    + P+       TEH  +    VF K + V       + + +  
Sbjct: 309 ITYTEAIEILKKNNKKFQFPVEWGVDIQTEHERYLTEVVFKKPVFVTDYPKEIKSFYMKM 368

Query: 332 KGGGGNRAFCDRM 344
              G   A  D +
Sbjct: 369 NADGKTVAAADML 381



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 47/136 (34%), Gaps = 24/136 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P     +E K        F M                 A    LV    E+ 
Sbjct: 350 KPVFVTDYP-----KEIKS-------FYMKMNAD--------GKTVAAADMLVPGIGELI 389

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + ++     +G+ K   E          + G   H G   G +R++M L G
Sbjct: 390 GGSQREENYDKLVARMDELGMDKTNYE----WYLNLRKFGGVEHAGYGLGFERMIMYLTG 445

Query: 553 AKNVREVSLFPMSQNF 568
            +N+R+V  FP +   
Sbjct: 446 IQNIRDVLPFPRTAYG 461


>gi|219275592|ref|NP_001136421.1| asparaginyl-tRNA synthetase, cytoplasmic isoform 2 [Rattus
           norvegicus]
          Length = 507

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/344 (20%), Positives = 127/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + + G 
Sbjct: 84  GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLSDDLCQCYNGVVLSTESSVAVYGT 143

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 144 LNLTPKG----KQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 199

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ I    R       + E +TP L  +  EG           + +F  L Q
Sbjct: 200 NMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 257

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   EF  ++ E  F+  +D+L+ +E++
Sbjct: 258 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLSRLEDL 316

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 317 VCDVVDRVLKSPVASIVYDLNPNFKAPKRPFRRMNYSDAIEWLREHDVKKEDG-TFYEFG 375

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           +    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 376 DDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDPRLTE 419



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 424 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 479

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  +L   ++R+V L+P 
Sbjct: 480 ERFLSWILNRYHIRDVCLYPR 500


>gi|291561911|emb|CBL40716.1| asparaginyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 463

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 58/353 (16%), Positives = 118/353 (33%), Gaps = 51/353 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   +++ GW+  +R      F+ + D       Q+V +   A F     +     
Sbjct: 13  RDKYLNQEIQVGGWIRSIRDSKAFGFIVLNDGTSFDTLQIVYHDTMANFAEVSKLNVGAS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A ++ +   A     P+  +R   E +R     
Sbjct: 73  IIVKGTLVATPE-------AKQPFEIQATEVTVEG-ASSADYPLQKKRHTFEYLR-TIPH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ I  ++      + F+   TP++T+S  EGA +    + ++   
Sbjct: 124 LRARTNTFQAVFRVRSLIAYAIHQYFQEQGFVYVHTPLITSSDCEGAGEMFQVTTLDLDN 183

Query: 190 -------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+    +     Q      A  F   +   P FR E+  + R   E
Sbjct: 184 VPKTEDGAVDYSKDFFGKHTSLTVSGQLNAETYAMAFRNVYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ EM+F + DD +   E +L+ V            NF                   
Sbjct: 244 FWMIEPEMAFADLDDNMAVAEGMLKYVIRYVLENAPSEMNFFNQFVDKGLLDRLNHVLNS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
               + Y +A++       +    +       TEH  +   ++F + + V   
Sbjct: 304 EFGHVTYTEAVKLLEEHNDEFDYKVFWGCDLQTEHERYLTEKIFKRPVFVTDY 356



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 52/139 (37%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K        F M           D  ++ A    LV    EI 
Sbjct: 349 RPVFVTDYP-----KEIK-------AFYMK-------LNPDGKTVAAVDC-LVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    E +L   + +G+        +G      + G   H G   G +R VM L G
Sbjct: 389 GGSQREDDYEKLLARMNELGLKP----EDYGFYLDLRKYGSVRHSGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N C+L
Sbjct: 445 MGNIRDVVPFPRTVNNCEL 463


>gi|145634910|ref|ZP_01790617.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|229845116|ref|ZP_04465251.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|145267776|gb|EDK07773.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|229811952|gb|EEP47646.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 467

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 74/429 (17%), Positives = 141/429 (32%), Gaps = 68/429 (15%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 17  IGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYENEILRLTTGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G ++   AE          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGKIVESPAEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F   +D     E++L+ VF                           N V+++F
Sbjct: 250 MVEPEVAFATLEDNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENFVNSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH        F   + V    +       
Sbjct: 310 AQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
                +AF  R+N+        G       +   G    +G   +   +   +     + 
Sbjct: 365 -----KAFYMRLND-------DGKTVAAMDVLAPGIGEIIGGSQREERLEVLDKRMEEMG 412

Query: 393 MQDGDSCFF 401
           +   D  ++
Sbjct: 413 LNPDDYWWY 421



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    EV+ +    +G++ +             +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEVLDKRMEEMGLNPDDYW----WYRDLRK 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 427 YGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPR 463


>gi|23270695|gb|AAH35324.1| Kars protein [Mus musculus]
          Length = 622

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/287 (21%), Positives = 118/287 (41%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 152 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFVHINNKLRRGDIIGV 209

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E        G++ +  Q+I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 210 --EGNPGKTKKGELSIIPQEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 266

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 267 QKFIVRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 325

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E +L 
Sbjct: 326 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMLS 384

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          +I Y          + D   P    ++ E 
Sbjct: 385 GMVKSITGSY-------KITYHPDGPEGQAYEVDFTPPFRRISMVEE 424



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 504 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 563

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 564 YGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMK 599


>gi|300819171|ref|ZP_07099372.1| asparaginyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300528190|gb|EFK49252.1| asparaginyl-tRNA synthetase [Escherichia coli MS 107-1]
          Length = 466

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 127/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +     Q E+ A K+E+    E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASPGQGQQFEIQASKVEVTGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +DI    E +L+ VF+                            +  +F ++
Sbjct: 252 PEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+ +    +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|291390507|ref|XP_002711778.1| PREDICTED: lysyl-tRNA synthetase isoform 1 [Oryctolagus cuniculus]
          Length = 596

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 60/276 (21%), Positives = 117/276 (42%), Gaps = 15/276 (5%)

Query: 6   THSCGDLGVSDVGS-----FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           TH   +      G       ++++G +H  R  G  +IF D+R      QV+AN  S  +
Sbjct: 105 THFIEEYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNY 162

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  +           G ++             G++ +   +I +LS      LP      
Sbjct: 163 KSEEEFTRINNKLRRGDIIGVQGNP--GKTKKGELSIIPHEITLLSPCL-HMLPHLHFGL 219

Query: 120 YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
             +  R++ R+LDL  +   +   + R++II  +R  +    F+E  TP++        A
Sbjct: 220 KDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVA 279

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   
Sbjct: 280 KPFITYHNELDMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTC 337

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +  M++ +  D++   E ++ G+ +  + G TV+ +
Sbjct: 338 EFYMAYADYHDLMEITEKMISGMVKHVTGGYTVTYH 373



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 42/114 (36%), Gaps = 12/114 (10%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     E+ +     +      Q F     +K   ++           A +
Sbjct: 478 KEGLTERFELFVMKKEVCNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 537

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ--------NFCDLLMGSP 576
            G+PP  G   GIDR+ M L  + N++EV LFP  +           D L  SP
Sbjct: 538 YGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDKKESVAATDTLESSP 591


>gi|260597330|ref|YP_003209901.1| asparaginyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260216507|emb|CBA29684.1| Asparaginyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 467

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/421 (16%), Positives = 132/421 (31%), Gaps = 52/421 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDS----ACFEIAKSVRSEWVL 71
           V S V + GWV   R    GI FL + D      + A  ++       E+        V+
Sbjct: 17  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPIQAVINNSLPNYNEEVLHLTTGCSVI 76

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G V+    E  +        EL A ++E+    ++        + +      +   L
Sbjct: 77  -VTGKVVESPGEGQS-------FELQATQVEVTGWVDDPDTYPMAAKRHSIEYLREVAHL 128

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---- 187
             R + +      R  +  ++      + F   STP++TAS  EGA +    S ++    
Sbjct: 129 RPRTNLIGAVARVRHTLAQALHRFFHEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENL 188

Query: 188 ----------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q      A    + +   P FR E+  + R   EF
Sbjct: 189 PRDDQGKIDFDKDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHLAEF 248

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--------------LRICYD 280
           + L+ E++F   +D+    E +L+ VF+   +       F                I  D
Sbjct: 249 WMLEPEVAFANLNDVAGLAEAMLKYVFKAVLDERMDDMKFFAERVDKEAIDRLERFISAD 308

Query: 281 DAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
            A   Y      L            +   +     +       ++   +        +AF
Sbjct: 309 FAQVDYTDAVAILEKSGEKFE-NPVYWGVDLASEHERYLAEKHFKAPVVVKNYPKDIKAF 367

Query: 341 CDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCF 400
             R+NE        G       +   G    +G   +   +   +A    + +   D  +
Sbjct: 368 YMRLNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMEEMGLNKEDYWW 420

Query: 401 F 401
           +
Sbjct: 421 Y 421



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      +G++K      +      
Sbjct: 371 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMEEMGLNK----EDYWWYRDL 424

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 425 RRYGTVPHAGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 463


>gi|229826510|ref|ZP_04452579.1| hypothetical protein GCWU000182_01885 [Abiotrophia defectiva ATCC
           49176]
 gi|229789380|gb|EEP25494.1| hypothetical protein GCWU000182_01885 [Abiotrophia defectiva ATCC
           49176]
          Length = 463

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/372 (17%), Positives = 120/372 (32%), Gaps = 61/372 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
            G  V + GW+  VR      F+ + D       QVV +     F     +     + + 
Sbjct: 17  AGKEVTVGGWIRSVRDSKTFGFIVLSDGTYFETLQVVYHDKMENFAEVSKLNVGSAIIVK 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G +                 E+ A +I I   +     P+  +R   E +R     L  R
Sbjct: 77  GELTLTPD-------AKQPFEIQATEIIIEGKS-TSDYPLQKKRHSMEYLR-TISHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +T       R+ I  ++       +F+   TPI+T S  EGA +    + ++       
Sbjct: 128 TNTFQAVFRVRSLIAYAIHKFFQERDFVYVHTPIITGSDAEGAGEMFRVTTLDLDNLPMG 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGKVDNSKDFFGKATNLTVSGQLNGETYAMAFKNIYTFGPTFRAENSNTTRHAAEFWMI 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F + +D ++  E +L+ +             F                      R
Sbjct: 248 EPEIAFADLEDNMDLAEAMLKYIINYVLENAPEEMAFFNQFIDKELIERLKGVAGSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           + Y +AI        +    +       TEH  +   ++F + + V    +         
Sbjct: 308 VSYTEAIELLKEHNDEFDYKVSWGCDLQTEHERYLTEKIFKRPVFVTDYPKDI------- 360

Query: 335 GGNRAFCDRMNE 346
              +AF  ++NE
Sbjct: 361 ---KAFYMKLNE 369



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 50/139 (35%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P        K I      F M           D  ++ A    LV    EI 
Sbjct: 349 RPVFVTDYP--------KDIKA----FYMK-------LNEDGKTVAAMDC-LVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +++      +G++    E  +       + G   H G   G +R VM L G
Sbjct: 389 GGSQREEDYDLLTGRMKELGLN----EADYDFYLDLRKYGSTRHAGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP +   C+L
Sbjct: 445 MSNIRDVIPFPRTVGNCEL 463


>gi|37361912|gb|AAQ91069.1| LRRGT00113 [Rattus norvegicus]
          Length = 496

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/344 (20%), Positives = 127/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + + G 
Sbjct: 73  GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLSDDLCQCYNGVVLSTESSVAVYGT 132

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 133 LNLTPKG----KQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 188

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ I    R       + E +TP L  +  EG           + +F  L Q
Sbjct: 189 NMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 246

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   EF  ++ E  F+  +D+L+ +E++
Sbjct: 247 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLSRLEDL 305

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 306 VCDVVDRVLKSPVASIVYDLNPNFKAPKRPFRRMNYSDAIEWLREHDVKKEDG-TFYEFG 364

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           +    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 365 DDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDPRLTE 408



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 413 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 468

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  +L   ++R+V L+P 
Sbjct: 469 ERFLSWILNRYHIRDVCLYPR 489


>gi|118399585|ref|XP_001032117.1| lysyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|89286455|gb|EAR84454.1| lysyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 659

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 123/334 (36%), Gaps = 12/334 (3%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           + + V +   +   R  G  +        G    V    S   +   S      L   G 
Sbjct: 188 IDTIVTIGARITSFRASGKALIFYQVQQEGKKLQVLANKSVYTDAEYSFEEINSLFKRGD 247

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-R 135
           ++  + +   +   TG++ ++  K+++LS      LP           R++ R+LDL   
Sbjct: 248 IIGITGKPTRSK--TGELSIAPTKLQLLSPCL-HMLPSLHTGLKDMETRYRKRYLDLIMN 304

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           ++   N + RT+II+ +R  +   NF+E  TP +       A    V    +      + 
Sbjct: 305 NSSRNNFITRTKIISYIRRYLDDRNFLEVETPQMNMIPGGAAARPFVTHHNDLNMDIFMR 364

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  GF+R ++I   FR+E       P EF  +++  ++ + +D++   E+
Sbjct: 365 IAPELYLKNLVVGGFERVYEIGKQFRNEGIDRTHNP-EFTSIELYQAYADYEDMMKLTED 423

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-PDLRNPIIMHNVTEHFVHSEFRVF 314
           +L  +  + +    +   F     ++    Y  D  P  +   +M  ++E     +    
Sbjct: 424 LLSSLVMKLTGSYKIK--FHPEGKENPDNSYEIDFTPPFKRVPMMETLSEKLGGVKMPEN 481

Query: 315 SKILSV----NPGYEVWAIPAKGGGGNRAFCDRM 344
                     +       +            D++
Sbjct: 482 YDTEEAREFFDKLCVQHNVACSAPRSTTRLIDKL 515



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 8/116 (6%)

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF----SN 510
             +P  M           ++      +++L  N +E+ +     +      + F      
Sbjct: 531 MEHPQIMSPLAKYHRSKPNV----TERFELFVNYYELCNAFTELNDPFKQRKIFVQQIEE 586

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                              +  +PP GG   GIDR+VMLL     ++EV LFP  +
Sbjct: 587 KNKGDVEAMGYDKDFCDCLEHALPPTGGWGLGIDRLVMLLTDNIYIQEVLLFPAMK 642


>gi|146311106|ref|YP_001176180.1| asparaginyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166980087|sp|A4W8U9|SYN_ENT38 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|145317982|gb|ABP60129.1| asparaginyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 466

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 75/429 (17%), Positives = 144/429 (33%), Gaps = 68/429 (15%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSEWVLC 72
           V   V + GWV   R    GI FL + D      V A  +++     +    + +   + 
Sbjct: 16  VDQEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNDDVLHLTTGCSVI 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G+V++   +  +        EL A  IE+    E+        + +      +   L 
Sbjct: 76  VTGVVVASPGQGQS-------FELQATAIEVTGWVEDPDTYPMAAKRHSIEYLREVAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----- 187
            R + +      R  +  ++      + +   STP++TAS  EGA +    S ++     
Sbjct: 129 PRTNMIGAVARVRHTLAQALHRFFDEQGYFWVSTPLITASDTEGAGEMFRVSTLDLENLP 188

Query: 188 ---------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+   A      Q      A    + +   P FR E+  + R   EF+
Sbjct: 189 RTPEGKVDFDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            L+ E++F   +D+    E +L+ VF+                            VS +F
Sbjct: 249 MLEPEVAFANLNDVAGLAEAMLKYVFKAVLEERADDMKFFAERVDSDAVARLERFVSADF 308

Query: 275 LRICYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            ++ Y DA+           NP+    ++ +EH  +   + F   + V    +       
Sbjct: 309 AQVDYTDAVAILEKCGEKFENPVYWGVDLSSEHERYLAEKHFKAPVVVKNYPKDI----- 363

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
                +AF  R+NE        G       +   G    +G   +   +   +A    + 
Sbjct: 364 -----KAFYMRLNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMEEMG 411

Query: 393 MQDGDSCFF 401
           +   D  ++
Sbjct: 412 LNPADYSWY 420



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      +G++       +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMEEMGLNPAD----YSWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIAFPRTPR 462


>gi|147677755|ref|YP_001211970.1| asparaginyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|189083275|sp|A5D2C2|SYN_PELTS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|146273852|dbj|BAF59601.1| aspartyl/asparaginyl-tRNA synthetases [Pelotomaculum
           thermopropionicum SI]
          Length = 430

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/301 (20%), Positives = 112/301 (37%), Gaps = 31/301 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK---SVRSEWVLCI 73
            G  V + GW++  R  G I FL +RD  G+ Q V    +A  ++     ++  E  L +
Sbjct: 13  AGQEVLIKGWLYNKRSSGKICFLIVRDGTGLVQGVVEKKAAGEDLFSLAGNITQESSLML 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V              G  E+    +EI+ +AE  P      +E+      + R L +
Sbjct: 73  RGTVREEPR-------APGGFEIQVTGLEIVHMAEPYP---ISLKEHGVDFLAERRHLWI 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R+ +    R      +F+    PI+T ++ EG  +        + ++  
Sbjct: 123 RTPRQSAILRIRSELEKGCRDFFEERDFVLADAPIITPTACEGTTNLFEIDYHGEKAY-- 180

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +   A    R +   P FR E  ++ R   EF+ ++ E +F + +D +   
Sbjct: 181 LSQSGQLYNE-ATAMALGRVYCFGPTFRAEKSKTRRHLMEFWMVEAEAAFFDFEDNIRLQ 239

Query: 254 ENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRYGTDKPDLRNPII 298
           E ++  +       N                    F R+ Y DA+    +   D +    
Sbjct: 240 EELVSYLVRRVLENNKKELELLRRDTGRLTGVTPPFPRMSYTDAVDFLNSKGVDFKWGDD 299

Query: 299 M 299
            
Sbjct: 300 F 300



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 47/151 (31%), Gaps = 9/151 (5%)

Query: 425 GIINCNCFEFCWIMDF--PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
             +N    +F W  DF  P      E   +    + F +           +   +     
Sbjct: 285 DFLNSKGVDFKWGDDFGAPHETMISEHFGLPVFIHRFPVDIKAFYMKPDPENPDVVLGA- 343

Query: 483 DLVCNGFEIASGG--IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           DL+         G   R    E++ +      +     E  F       + G  PH G  
Sbjct: 344 DLLAPEGYGEIIGGGQRIDELELLKKRLVQHKLP----EEAFEWYLDLRRYGSVPHSGFG 399

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G++R++  + G +++RE   FP        
Sbjct: 400 LGLERLLAWICGIEHIREAIPFPRMLYRMCP 430


>gi|293373876|ref|ZP_06620218.1| lysine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292631097|gb|EFF49733.1| lysine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 575

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 53/273 (19%), Positives = 113/273 (41%), Gaps = 10/273 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +    +    V ++G +   R  G   F++++D  G  QV    D  C   
Sbjct: 36  NAFSTDIKAEFKDDEEPRQVSVAGRIMSRRVMGKASFVELQDSKGRIQVYITRDDICPGE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + A+K+ +L+ + +    V  +    
Sbjct: 96  DKELYNSVFKRLLDLGDFIGIEGFVFRTQMGEISIHAKKLTVLAKSIKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                   +R++ R++DL  +  + +  +KR  ++ ++R  +    + E  TPIL + + 
Sbjct: 156 YDSFEDPELRYRQRYVDLVVNDGIKETFLKRATVVKTLRNALDEAGYTEVETPILQSIAG 215

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+  GF+  ++I   FR+E       P E
Sbjct: 216 GASARPFITHHNSLDMDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           F  +++ + + + + ++N  E +L  +    + 
Sbjct: 274 FTCMELYVQYKDYNWMMNFTEKLLERICIAVNG 306


>gi|291461106|ref|ZP_06027024.2| asparagine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291378975|gb|EFE86493.1| asparagine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 462

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 68/390 (17%), Positives = 126/390 (32%), Gaps = 56/390 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
           G   +   + L GWV ++R      F+++ D       Q+V       F+    +     
Sbjct: 12  GEEHLNKEIELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSIAST 71

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++               +E+ A+KIEI   A+ L  P+  +R   E +R K   
Sbjct: 72  IKVKGTLVKSEGSG-------QDLEVKAKKIEIFQKAD-LEYPLQNKRHTFEYLRTK-AH 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++       NF+   TPI+T S  EGA +    + ++   
Sbjct: 123 LRARTNTFSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEMFRITTLDLNK 182

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       + F   +   P FR E   + R   E
Sbjct: 183 VPKKENGEVDFSKDFFGKSTNLTVSGQLNGETYCAAFRNIYTFGPTFRAEYSNTARHASE 242

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +    +   E +++ + +   +       F                   
Sbjct: 243 FWMIEPEIAFADLGANMELAEAMVKYIIKYVMDNCPEEMEFFNSFIEKGLFDKLNNVLNN 302

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+   +   +EH  +     F K     P +      
Sbjct: 303 DFGRVTYTEAIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYFKK-----PVFVTDYPK 357

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                  +   D     A     PG+  I 
Sbjct: 358 EIKAFYMKLNEDNKTVRAMDLLAPGIGEII 387



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P     +E K        F M           D  +++A   DL+  G  EI
Sbjct: 348 KPVFVTDYP-----KEIK-------AFYMK-------LNEDNKTVRAM--DLLAPGIGEI 386

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    E++++    + + KE  E          + G  PH G   G +R++M L 
Sbjct: 387 IGGSQREDNYELLVKRMDELKLDKEAYE----FYLDLRRFGSFPHSGYGLGFERMMMYLT 442

Query: 552 GAKNVREVSLFPMSQN 567
           G +N+R+V  FP + N
Sbjct: 443 GMQNIRDVIPFPRTPN 458


>gi|242239076|ref|YP_002987257.1| asparaginyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242131133|gb|ACS85435.1| asparaginyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 466

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 70/388 (18%), Positives = 126/388 (32%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVLC 72
           V S V + GWV   R    GI F+ + D      + A  ++           + +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFIAVYDGSCFNPLQAVVNNHLDNYQSEILRLTTGCSVE 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+    E  +        EL A  + ++   ++        + +      +   L 
Sbjct: 76  VTGNVVESPGEGQS-------FELQATHVAVVGWVDDPDTYPMAAKRHSIEYLREVAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ---- 188
            R + +      R  +  ++        F   STP++TAS  EGA +    S ++     
Sbjct: 129 PRTNLIGAVARVRHTLAQAIHRFFHQNGFYWVSTPLITASDTEGAGEMFRVSTLDLENLP 188

Query: 189 ----------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+   A      Q      A    + +   P FR E+  + R   EF+
Sbjct: 189 RTENGKVDFGEDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F   DDI    EN+L+ VF+                            + ++F
Sbjct: 249 MIEPEVAFASLDDIAALAENMLKFVFKAVLEERADDMAFFAERVDKEAVERLERFIHSDF 308

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            ++ Y DAI           NP+   +   +EH  +   + F   + V    +       
Sbjct: 309 AQVDYTDAITILQNSGQSFENPVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI----- 363

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 364 KAFYMRMNSDGKTVAAMDVLAPGIGEII 391



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    + +   
Sbjct: 347 EKHFKAPVVVKNYPKDIKAFYMRMNSDGKTVAAMDVLAPGIGEIIGGSQREERLQQLDAR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              +G++K      +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 407 LEEMGLNK----EDYWWYRDLRRYGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|269123212|ref|YP_003305789.1| asparaginyl-tRNA synthetase [Streptobacillus moniliformis DSM
           12112]
 gi|268314538|gb|ACZ00912.1| asparaginyl-tRNA synthetase [Streptobacillus moniliformis DSM
           12112]
          Length = 460

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 66/375 (17%), Positives = 136/375 (36%), Gaps = 61/375 (16%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVL 71
              +   V+L GWV ++R      F++  D       Q+V + +   FE    +     +
Sbjct: 11  EKYLNKKVKLDGWVKKIRSQKKFGFIEFNDGTYFQGIQIVFDDNLENFEEISKLSIYSSI 70

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            ++G ++    +  +        E+    I + + A+         + +          L
Sbjct: 71  SVEGTLVKSEGKGQS-------FEIKVDNISVYNKADISNPLQ--NKRHGMEFLRTIAHL 121

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +T +     R+ + +++    +  NF+   TPI T++  EGA +    + ++    
Sbjct: 122 RPRTNTFNAVFRVRSLLAHAIHKFFMERNFVYVQTPIFTSTDAEGAGEMFQVTTLDLNNL 181

Query: 190 ------------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+A P       Q      AS F   +   P FR E+  + R   EF
Sbjct: 182 PRNEENIIDYREDFFAKPSYLTVTGQLHVEAFASAFHNTYTFGPTFRAEESYTARHAAEF 241

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNN 273
           + ++ E++F   +  ++  E++++ + +   +                      N ++N+
Sbjct: 242 WMIEPEIAFANLETNMDIAESMIKYIIKYVMDNAPLEMEFFNTWIEKGIIDKLNNILNND 301

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           F R+ Y +AI        +   P+   M   TEH  +    VF K + V    +      
Sbjct: 302 FGRVTYTEAIDILKNSDAEFTIPVEWGMDLKTEHERYLAENVFKKPVFVTDYPKDI---- 357

Query: 332 KGGGGNRAFCDRMNE 346
                 +AF  ++NE
Sbjct: 358 ------KAFYMKLNE 366



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 51/137 (37%), Gaps = 26/137 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P        K I      F M           D  +++A   DL+  G  EI
Sbjct: 346 KPVFVTDYP--------KDIKA----FYMK-------LNEDGKTVRAM--DLLAPGIGEI 384

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    + ++       ++     + +       + G  PH G   G +R++M + 
Sbjct: 385 VGGSQREEDYDKLVNIMREKELNI----DDYSWYLDLRKFGSFPHSGYGLGFERMLMYIT 440

Query: 552 GAKNVREVSLFPMSQNF 568
           G  N+R+V  FP +   
Sbjct: 441 GISNIRDVLAFPRTAKS 457


>gi|148679580|gb|EDL11527.1| mCG141545, isoform CRA_d [Mus musculus]
          Length = 633

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/287 (21%), Positives = 118/287 (41%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 154 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFVHINNKLRRGDIIGV 211

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E        G++ +  Q+I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 212 --EGNPGKTKKGELSIIPQEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 268

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 269 QKFIVRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 327

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E +L 
Sbjct: 328 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMLS 386

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          +I Y          + D   P    ++ E 
Sbjct: 387 GMVKSITGSY-------KITYHPDGPEGQAYEVDFTPPFRRISMVEE 426


>gi|237720034|ref|ZP_04550515.1| lysyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|299147908|ref|ZP_07040971.1| lysine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|229450586|gb|EEO56377.1| lysyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|295084792|emb|CBK66315.1| Lysyl-tRNA synthetase (class II) [Bacteroides xylanisolvens XB1A]
 gi|298514091|gb|EFI37977.1| lysine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 575

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 53/273 (19%), Positives = 113/273 (41%), Gaps = 10/273 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +    +    V ++G +   R  G   F++++D  G  QV    D  C   
Sbjct: 36  NAFSTDIKAEFKDDEEPRQVSVAGRIMSRRVMGKASFVELQDSKGRIQVYITRDDICPGE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + A+K+ +L+ + +    V  +    
Sbjct: 96  DKELYNSVFKRLLDLGDFIGIEGFVFRTQMGEISIHAKKLTVLAKSIKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                   +R++ R++DL  +  + +  +KR  ++ ++R  +    + E  TPIL + + 
Sbjct: 156 YDSFEDPELRYRQRYVDLVVNDGIKETFLKRATVVKTLRNALDEAGYTEVETPILQSIAG 215

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+  GF+  ++I   FR+E       P E
Sbjct: 216 GASARPFITHHNSLDMDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           F  +++ + + + + ++N  E +L  +    + 
Sbjct: 274 FTCMELYVQYKDYNWMMNFTEKLLERICIAVNG 306


>gi|222099867|ref|YP_002534435.1| Lysyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572257|gb|ACM23069.1| Lysyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 502

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 67/323 (20%), Positives = 127/323 (39%), Gaps = 23/323 (7%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y     G++  S     +  +G V  +R HG   F  ++D  G  Q     D+   + 
Sbjct: 39  EKYDHLQAGEVQES---EKLSFAGRVMSIRHHGKTAFFHLKDDTGRIQAYIRADAVGKDR 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
               +    +                   TG++ +  +   +LS A   PLP        
Sbjct: 96  MGLFKKHVKIGD-----FVGVRGFPFKSKTGELTIYVEDFTLLSKALR-PLPEKWHGIKD 149

Query: 122 ESIRFKYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
           + I ++ R+L+L   D   +   KR   +  +R  + +  F+E  TPIL   +    AR 
Sbjct: 150 KEIIYRQRYLELIMSDEAIERFKKRFEAMRVIREFLNSRGFVEVETPILHYVTGGAEARP 209

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+    V     Y L  AP+ Y + L+  GF++ ++I   FR+E       P EF  +++
Sbjct: 210 FVTHLNVFDVDMY-LRIAPELYLKRLIVGGFEKIYEIGKNFRNEGISYKHSP-EFTSIEI 267

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR----------YGTD 289
             ++ + +D++N  E ++  V +       ++     I +    RR           G D
Sbjct: 268 YQAYADYNDMMNLTEELIVEVVKRTCGTLKITYQGKEIDFTPPWRRVRMRDFLKEKLGVD 327

Query: 290 KPDLRNPIIMHNVTEHFVHSEFR 312
             +  + +++  + EH V  E +
Sbjct: 328 ILEDSDEVLLKKLEEHGVEVEIK 350



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 56/152 (36%), Gaps = 26/152 (17%)

Query: 417 RNHIAQEL-GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           R H+  +L  I+        +I+D P      +   +   H                D  
Sbjct: 352 RAHLIDKLRDIVEEELVNPTFIIDHPV-----DISPLAKRHR--------------EDPR 392

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQC 531
                +++L+  G EIA+     +      Q F      +E  +           RA + 
Sbjct: 393 --LTERFELIIFGREIANAFSELNDPIDQYQRFLEQMKMREEGDEEAHMMDLDFVRALEY 450

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP GG+  G+DR+ M +  +  +R++  FP
Sbjct: 451 GMPPTGGLGIGLDRLFMFITDSPTIRDIIPFP 482


>gi|116332751|ref|YP_794278.1| lysyl-tRNA synthetase (class II) [Lactobacillus brevis ATCC 367]
 gi|116098098|gb|ABJ63247.1| Lysyl-tRNA synthetase (class II) [Lactobacillus brevis ATCC 367]
          Length = 502

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 64/321 (19%), Positives = 126/321 (39%), Gaps = 20/321 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           + +Y  +   +L       +V ++G +   R  G   F+D+ D  G+ Q  A  D    E
Sbjct: 49  IEKYDKYDKEELMEDK--HYVAVAGRITGKRGSGKAGFIDLLDRTGVVQGYARQDELGEE 106

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                ++  +    G      A+       TG + L   + E LS +   PLP       
Sbjct: 107 TYALYKTLDLGDFIG------AKGYVIKTNTGALTLRMTEFEFLSKSLR-PLPDKYHGLT 159

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKR-TRIINSMRCRMIAENFIECSTPILTASSPEG-AR 178
                ++ R+LDL  +    +   + T+I  ++R  +  E ++E  TP+L   +    AR
Sbjct: 160 NPETIYRQRYLDLISNRESFDRFLKVTKIKKAIREYLDGEGYLEVDTPVLQTEAGGAEAR 219

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+  S       Y L  A + Y + L+  GF++ +++   FR+E       P EF  ++
Sbjct: 220 PFITHSNAFDIPLY-LRIATELYLKRLIVGGFEKVYELGKDFRNEGTDLRHNP-EFNMVE 277

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP------- 291
           +  ++ +  D+++ +EN+ R V  + +    ++     I  D   +R             
Sbjct: 278 VYTAYTDYTDVMDLVENLFRFVANKVNGSGKLTYQGKDIDLDSDFKRLHMVDAVKDVTGI 337

Query: 292 DLRNPIIMHNVTEHFVHSEFR 312
           D   P+   +  +    +   
Sbjct: 338 DFWQPMSDEDAHKLAEENGIH 358



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 80/216 (37%), Gaps = 21/216 (9%)

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++  +++ SG +   G      +      +   +    G   +    D            
Sbjct: 298 FVANKVNGSGKLTYQGKDIDLDSDFKRLHMVDAVKDVTGIDFWQPMSDEDA--------- 348

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP-FTMPQG-GMESLKGNDLL 475
           + +A+E GI     ++   I++  F+E    EK  D   NP F       +  L   +  
Sbjct: 349 HKLAEENGIHCEPYWKVGHIINA-FFE----EKVQDTLINPTFIYGHPLEISPLAKKNPK 403

Query: 476 SIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
             +   +++L  +G E  +     +      Q F +    +                A +
Sbjct: 404 DGRFTDRFELYIDGNEYGNAFTELNDPIDQRQRFESQDAERAAGNEEAHGIDEDYVEAME 463

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GMPP GG+  GIDR+ MLL  + ++R+V LFP  +
Sbjct: 464 YGMPPTGGLGIGIDRMTMLLTDSTSIRDVMLFPTMR 499


>gi|116621920|ref|YP_824076.1| asparaginyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|122254422|sp|Q023P9|SYN_SOLUE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116225082|gb|ABJ83791.1| asparaginyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 461

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 67/372 (18%), Positives = 127/372 (34%), Gaps = 45/372 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDG 75
           G  V   GWV   R    + F+ + D      +    D+     ++   + +   + ++G
Sbjct: 17  GESVTARGWVKTRRDSKNVHFIQLNDGSSPVDLQVVLDAGVVPEDVVAKITTGACISVEG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            +++   +          +E+ A+ + +   A+    P+  ++   E++R     L  R 
Sbjct: 77  DLVASMGKGQA-------VEIKARALTVHGTADPEHYPLQKKKHTLETLREL-GHLRTRS 128

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +T       R  +  ++        F+   TP+++AS  EGA      + ++        
Sbjct: 129 NTFGAVFRVRNALACAIHKFFQDRGFMYVHTPVISASDAEGAGSMFQVTTLDLQSPKPAD 188

Query: 189 --GSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
             G F+          Q +  + A  F   +   P FR E+  + R   EFY ++ EM+F
Sbjct: 189 FTGDFFGKHTYLTVSGQLEAEIFAHAFANVYTFGPTFRAENSNTPRHLAEFYMIEPEMAF 248

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RICYDDA 282
            +  D  +  E  L+   E   N      +FL                     RI Y +A
Sbjct: 249 CDLKDNQDLAEAFLKSQVEYVVNACGPDLDFLAKWYDPELRKTLDGLMNASFERITYTEA 308

Query: 283 IRRYGTDKPDLRNPIIMHN--VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
           I            P    +   +EH  +    VF+K + V    +        G  +   
Sbjct: 309 IDLLQRSGRSFEFPTQWGSDMQSEHERYLTEEVFNKPVIVTDYPKDIKAFYMRGNDDGKT 368

Query: 341 CDRMNEWARSQG 352
              M+  A   G
Sbjct: 369 VAAMDVLAPRIG 380



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 50/145 (34%), Gaps = 21/145 (14%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +   + D+P        K I      F M        +GND     A  
Sbjct: 333 HERYLTEEVFNKPVIVTDYP--------KDIKA----FYM--------RGNDDGKTVAAM 372

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R    +V+LQ    +       E  +       + G   H G   
Sbjct: 373 DVLAPRIGEIIGGSQREERHDVLLQRIREMAAHGLREEAYW-WYLDLRRFGGVEHAGFGM 431

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           G +R++M L G KN+R+V  FP + 
Sbjct: 432 GFERMLMYLTGMKNIRDVIPFPRTP 456


>gi|253580427|ref|ZP_04857692.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848157|gb|EES76122.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 463

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 67/432 (15%), Positives = 134/432 (31%), Gaps = 68/432 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   V + GWV  VR      F+ + D       QVV +     F     +     
Sbjct: 13  REKYLDKEVTVGGWVRSVRDSKTFGFIVLHDGSFFETLQVVYHDTMENFAEISKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A ++ +   +         ++ +          
Sbjct: 73  IIVKGTLVATPQ-------AKQPFEIQAAEVTVEGNSAPDYPLQ--KKRHSLEYLRTITH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++      + F+   TP++T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSLCAYAIHRFFQEQGFVYVHTPLITGSDCEGAGEMFQVTTLDMNN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 VPTDDKGAVDYSQDFFGKETNLTVSGQLNCETFAQAFRNVYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E +F + +D ++  E +L+ V            NF                   
Sbjct: 244 FWMIEPECAFADLNDNMDLAEAMLKYVIRYVLENAPEEMNFFNSFVDKGLLDRLNHVINS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
               + Y +A+     +       +       TEH  +    +F K + V    +     
Sbjct: 304 EFGHVTYTEAVELLEKNNDKFDYKVFWGCDLQTEHERYLTEEIFKKPVFVTDYPKEI--- 360

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR 390
                  +AF  +MNE         +A +   +   G +  +G   +  +I   E     
Sbjct: 361 -------KAFYMKMNE-----DNKTVAAMDCLVPGIGEI--IGGSQREDDIEKLEKRMDE 406

Query: 391 LDMQDGDSCFFI 402
           L ++  D  F++
Sbjct: 407 LGLKKEDYDFYL 418



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 51/139 (36%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P     +E K        F M           D  ++ A    LV    EI 
Sbjct: 349 KPVFVTDYP-----KEIK-------AFYMKMNE-------DNKTVAAMDC-LVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    E + +    +G+ K      +       + G   H G   G +R VM L G
Sbjct: 389 GGSQREDDIEKLEKRMDELGLKK----EDYDFYLDLRKYGSTRHSGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP +   CDL
Sbjct: 445 MGNIRDVIPFPRTVKNCDL 463


>gi|150004187|ref|YP_001298931.1| asparaginyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|294775217|ref|ZP_06740741.1| asparagine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|166231658|sp|A6L0U5|SYN_BACV8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|149932611|gb|ABR39309.1| asparaginyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|294450922|gb|EFG19398.1| asparagine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 467

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/295 (21%), Positives = 109/295 (36%), Gaps = 29/295 (9%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F
Sbjct: 1   MEKISRTKIVDLLKRRDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLANF 60

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+ K + +   + ++G +         A       E+ A+ IE+L   +    P+  +
Sbjct: 61  DEEMLKQITTGACISVNGELTESIGSGQAA-------EVQARGIEVLGTCD-NTYPLQKK 112

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R +   L  R +T       R  +  ++        F    TPI+TAS  EGA
Sbjct: 113 GHTMEFLR-EIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPIITASDCEGA 171

Query: 178 RDFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
                 +  N                 F+    +     Q +  L A+     +   P F
Sbjct: 172 GQMFQVTTKNLYDLKKDENGAIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F +  D ++  E+ ++   +   +       FL
Sbjct: 232 RAENSNTPRHLAEFWMIEPEVAFNDITDNMDLAEDFIKYCVQWALDNCYDDVKFL 286



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 59/151 (39%), Gaps = 18/151 (11%)

Query: 426 IINCNCFEF--CWIMDFPFYEWNEEEKKIDFAHN----PFTMPQGGMESL---KGNDLLS 476
           ++  + FEF   W +D      +E E+ +   H       T     +++    +  D  +
Sbjct: 322 VVKGHKFEFPVYWGVDL----ASEHERYLVEEHFKRPVILTDYPKEIKAFYMKQNEDGKT 377

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A    L     EI  G  R    + ++     +GI  + +           + G  PH
Sbjct: 378 VRAMDV-LFPKIGEIIGGSEREADYDKLMTRIQELGIPMKDMW----WYLDTRKFGSCPH 432

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R+++ + G  N+R+V  FP +  
Sbjct: 433 SGFGLGFERLLLFVTGMTNIRDVIPFPRTPR 463


>gi|219275589|ref|NP_001020806.2| asparaginyl-tRNA synthetase, cytoplasmic isoform 1 [Rattus
           norvegicus]
 gi|149064471|gb|EDM14674.1| rCG46601, isoform CRA_b [Rattus norvegicus]
          Length = 558

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/344 (20%), Positives = 127/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + + G 
Sbjct: 135 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLSDDLCQCYNGVVLSTESSVAVYGT 194

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 195 LNLTPKG----KQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 250

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ I    R       + E +TP L  +  EG           + +F  L Q
Sbjct: 251 NMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 308

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   EF  ++ E  F+  +D+L+ +E++
Sbjct: 309 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLSRLEDL 367

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 368 VCDVVDRVLKSPVASIVYDLNPNFKAPKRPFRRMNYSDAIEWLREHDVKKEDG-TFYEFG 426

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           +    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 427 DDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDPRLTE 470



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 475 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 530

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  +L   ++R+V L+P 
Sbjct: 531 ERFLSWILNRYHIRDVCLYPR 551


>gi|195963321|ref|NP_001124340.1| lysyl-tRNA synthetase isoform 1 [Mus musculus]
 gi|20072717|gb|AAH27356.1| Kars protein [Mus musculus]
 gi|148679577|gb|EDL11524.1| mCG141545, isoform CRA_a [Mus musculus]
          Length = 624

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/287 (21%), Positives = 118/287 (41%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 154 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFVHINNKLRRGDIIGV 211

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E        G++ +  Q+I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 212 --EGNPGKTKKGELSIIPQEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 268

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 269 QKFIVRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 327

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E +L 
Sbjct: 328 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMLS 386

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          +I Y          + D   P    ++ E 
Sbjct: 387 GMVKSITGSY-------KITYHPDGPEGQAYEVDFTPPFRRISMVEE 426



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 506 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 565

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 566 YGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMK 601


>gi|113460899|ref|YP_718966.1| asparaginyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123031243|sp|Q0I2M9|SYN_HAES1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|112822942|gb|ABI25031.1| asparaginyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 467

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 127/388 (32%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFEI-AKSVRSEWVLC 72
           VG  V + GW+   R    G+ FL I D       Q + N D   +E     + +   + 
Sbjct: 17  VGETVTVRGWIRTRRDSKAGLSFLAIYDGSCFDPIQAIVNNDIENYETEILRLTTGCSVV 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G +    AE          +EL A KIE+    ++        + +      +   L 
Sbjct: 77  VTGKIAESPAEGQA-------VELQANKIEVSGWVDDPETYPMSAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RTDKGAVDFSQDFFGKESFLTVSGQLNGESYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF    N                      + ++++F
Sbjct: 250 MVEPEIAFATLADNAKLAEDMLKYVFRAVLNEREDDLKFFEKHVDKNVITRLKDFINSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH  +     F   + V    +       
Sbjct: 310 AQIDYTDAIDILLKSGKAFEFPVSWGIDLSSEHERYLAEEYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    EV+ +  + +G+     E+ +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEVLDKRIAEMGLK---AEDYW-WYRDLRR 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 427 YGTVPHAGFGLGFERLIVYVTGVQNIRDVIPFPRTPR 463


>gi|260174123|ref|ZP_05760535.1| lysyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315922390|ref|ZP_07918630.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696265|gb|EFS33100.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 575

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 53/273 (19%), Positives = 113/273 (41%), Gaps = 10/273 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +    +    V ++G +   R  G   F++++D  G  QV    D  C   
Sbjct: 36  NAFSTDIKAEFKDDEEPRQVSVAGRIMSRRVMGKASFVELQDSKGRIQVYITRDDICPGE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + A+K+ +L+ + +    V  +    
Sbjct: 96  DKELYNSVFKRLLDLGDFIGIEGFVFRTQMGEISIHAKKLTVLAKSIKPLPIVKYKDGVA 155

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                   +R++ R++DL  +  + +  +KR  ++ ++R  +    + E  TPIL + + 
Sbjct: 156 YDSFEDPELRYRQRYVDLVVNDGIKETFLKRATVVKTLRNALDEAGYTEVETPILQSIAG 215

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+  GF+  ++I   FR+E       P E
Sbjct: 216 GASARPFITHHNSLDMDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           F  +++ + + + + ++N  E +L  +    + 
Sbjct: 274 FTCMELYVQYKDYNWMMNFTEKLLERICIAVNG 306


>gi|317491485|ref|ZP_07949921.1| asparaginyl-tRNA synthetase [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316921032|gb|EFV42355.1| asparaginyl-tRNA synthetase [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 466

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 67/389 (17%), Positives = 133/389 (34%), Gaps = 50/389 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G + V + V + GWV   R    GI FL + D      + A  +++       V    + 
Sbjct: 12  GRAAVDTEVTVRGWVRTRRDSKAGISFLAVYDGSCFNPLQAVVNNSLPNYESDV----LR 67

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  + + + +       EL A +++++   E+        + +      +   L
Sbjct: 68  LTTGCSLEVTGKVVPSPGEGQSFELQATEVKVVGWVEDPDTYPMAAKRHSIEYLREVAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--- 188
             R + +      R  +  ++        +   STP++TAS  EGA +    S ++    
Sbjct: 128 RPRTNLIGAVARVRHTLAQAIHRYFHENGYFWVSTPLITASDTEGAGEMFRVSTLDMENL 187

Query: 189 -----------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRTDEGKVDFGEDFFGREAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNN 273
           + ++ E++F + +DI    E +L+ VF+   +                        V+++
Sbjct: 248 WMVEPEVAFADLNDIAGVAEGMLKYVFQAVLDERADDMEFFAQRVDKDAIDRLKRFVTSD 307

Query: 274 FLRICYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           F ++ Y +A+           NP+    ++ +EH  +   + F   + V    +      
Sbjct: 308 FAQVDYTEAVEILLNCGKTFENPVYWGVDLSSEHERYLAEQHFKAPVVVKNYPKDI---- 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 364 -KAFYMRMNEDGKTVAAMDVLAPGIGEII 391



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 14/111 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M           D  ++ A   D++  G  EI  G  R    +++      +G++K 
Sbjct: 365 AFYMRMNE-------DGKTVAAM--DVLAPGIGEIIGGSQREERLDMLDARLEEMGLNK- 414

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 415 ---EDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|225436215|ref|XP_002269584.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 619

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 66/352 (18%), Positives = 130/352 (36%), Gaps = 41/352 (11%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           + +Y   S GD  + DV   V L+G +   R     + F D+       QV+A+  S+  
Sbjct: 111 IKKYGALSNGD-HLEDV--TVSLAGRIMSKRSSSSKLFFYDLHGDGAKVQVMADARSSDM 167

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF---- 115
           + A+  R    +    +V              G++ +  +   +LS    +         
Sbjct: 168 DEAEFSRFHSGVKRGDIV---GVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAGPG 224

Query: 116 ------GEREY---------------PESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMR 153
                  + +                 +  R++ R+LDL  +  + +    R +II+ +R
Sbjct: 225 SDNANVKKTDVWVPGSTRNPETYILKDQETRYRQRYLDLMLNMEVRQIFKTRAKIISYIR 284

Query: 154 CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
             +   +F+E  TP++   +   A    V    +      +  AP+ Y + L+  G DR 
Sbjct: 285 SFLDNLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMKLYMRIAPELYLKELVVGGLDRV 344

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           ++I   FR+E       P EF   +  M+F + +D++   E +L G+ +E + G  +  +
Sbjct: 345 YEIGKQFRNEGIDLTHNP-EFTTCEFYMAFADYNDVMELTEKMLSGMVKELTGGYKIKYH 403

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
              +  D         + D   P    ++ E           K LS +   +
Sbjct: 404 ANGLDKD-------PIEIDFTPPFRRIDMIEDLEKMADLSIPKDLSSDEANK 448


>gi|221119490|ref|XP_002155876.1| PREDICTED: similar to aspartyl-tRNA synthetase [Hydra
           magnipapillata]
          Length = 570

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 79/379 (20%), Positives = 145/379 (38%), Gaps = 44/379 (11%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAK 63
           +  DL        V L   +H  R  G   FL +R        +  V  +      + A 
Sbjct: 119 NVSDLNPLKKNEKVLLRARLHTSRGTGKQCFLMLRQRQFSVQALVAVNEHISKQMVKFAT 178

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER----- 118
           ++  E ++ ++G V+    + ++A+     +E+  QKI ++S A+        +      
Sbjct: 179 NISKESIVDVEGTVVEVEQKILSASQE--DVEVHIQKIFVVSKADPRLPLQIEDASRPEN 236

Query: 119 -----EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                   +  +  YR +DLR  T          I    R  + +  F E  TP + +++
Sbjct: 237 DDSLAHVNQDTKLDYRVIDLRTITNQALYKVEAGICKLFREHLDSRGFTEVHTPKIISAA 296

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ +A  FD+ + I   FR ED  + R   E
Sbjct: 297 SEGGANVFKVSYFKGNAYLA--QSPQLYKQMAIAGDFDKVYTIGSVFRAEDSNTHRHLCE 354

Query: 234 FYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVS-----NNFLR----------- 276
           F  LD+EM+F +   +++  + N+   +F+   +  +         F             
Sbjct: 355 FIGLDIEMAFKDHYHEVIQEIGNLFIAIFKGLRDRYSNEISTVAKQFPCEPFKFLEPSLV 414

Query: 277 ICYDDAIRRYGT------DKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           + + +AI+          DK DL  P    +  + +    ++F +  K  L+V P Y + 
Sbjct: 415 LTFPEAIKMLRENGVEYSDKYDLITPNEKFLGKLVKAKYDTDFYILDKYPLAVRPFYTMP 474

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                G   +     R  E
Sbjct: 475 DPNVPGASNSYDMFMRGEE 493



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 81/240 (33%), Gaps = 39/240 (16%)

Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398
           AF D  +E  +  G   L    ++         +  VAK       + +          S
Sbjct: 363 AFKDHYHEVIQEIG--NLFIAIFKGLRDRYSNEISTVAKQFPCEPFKFLE--------PS 412

Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC-------WIMDFPFYEWNEEEKK 451
                 + +K            + +  +I  N  +F        +  DF   +      K
Sbjct: 413 LVLTFPEAIKMLRENG---VEYSDKYDLITPNE-KFLGKLVKAKYDTDFYILD------K 462

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
              A  PF               +   +  YD+   G EI SG  R H  E + +   + 
Sbjct: 463 YPLAVRPFYTMPD--------PNVPGASNSYDMFMRGEEILSGAQRIHDPEFLTERAKHH 514

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            I+ + ++        +F+ G  PH G   G++R+VML LG  N+R+ S+FP        
Sbjct: 515 KIAIDDIKA----YIESFKYGCSPHAGGGIGMERVVMLYLGLGNIRKASMFPRDPKRLTP 570


>gi|75764079|ref|ZP_00743678.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74488433|gb|EAO52050.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 437

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R  T  C    +   G  V L GWV ++R  G + FL +RD  G+ Q V     A + 
Sbjct: 5   MKRSLTKEC----MEQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENGLAGY- 59

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
               V  E V+ + G ++  S   +        +E+ A ++++++ AE LP  +  ++  
Sbjct: 60  ---KVDVESVVHVIGEIVETSKTEL-------GVEVLAHEVKVINGAEPLPFEINKKKLQ 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R + LR +        ++ ++ S    +I  +F    TP + +   EG  +
Sbjct: 110 VGLDQLLNERVISLRHERTAAIFKVKSTLVQSFSEILIENDFTRIFTPKIVSQGAEGGAN 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   + ++ A  Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+
Sbjct: 170 VFKLPYFQKEAYLA--QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDV 227

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           E+ F+ +  +++    +VLR +F++ +    +    L+I
Sbjct: 228 ELGFIHDFYEVMQLETDVLRYMFQQVAKKCEIELQLLQI 266



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TM      ++  
Sbjct: 297 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTMQNKENPAITD 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+       +F      F+ 
Sbjct: 346 S---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----EKFQSYLNTFRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 393 GCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|224106978|ref|XP_002333583.1| predicted protein [Populus trichocarpa]
 gi|222837523|gb|EEE75888.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 51/350 (14%), Positives = 119/350 (34%), Gaps = 30/350 (8%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V L+G +   R     + F D+       QV+A+   +  + A+  +    +    +V  
Sbjct: 118 VSLAGRIMSKRSSSSKLFFYDLHGLGTKVQVMADASKSGLDEAEFSKLHSSVKRGDIV-- 175

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---------------------- 117
                       G++ +      +LS    +                             
Sbjct: 176 -GVTGFPGKTKRGELSMFPTSFTVLSHCLHMMPRQKAGPGSDACVKKSEVWAPGTVRNPE 234

Query: 118 --REYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                 +  R++ R+LDL  +  + +    R++II  ++  +   +F+E  TP++   + 
Sbjct: 235 AYILKDQETRYRQRYLDLMLNLEVQQIFKTRSKIIKYVKSFLDNLDFLEVETPMMNMIAG 294

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             A    V    +      +  AP+ + + L+  G DR ++I   FR+E       P EF
Sbjct: 295 GAAARPFVTHHNDLNMKLYMRIAPELFLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EF 353

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
              +  M++ + +D++   E +L G+ +E + G  +  +   +  D     +      + 
Sbjct: 354 TTCEFYMAYADYNDLMELTEKMLSGMVKELTGGYKIKYHANGLDKDPIEIDFTPPFRRID 413

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
               +  +    +  +         +    E + +            D++
Sbjct: 414 MIEELEKMANLNIPKDLSSDEATKYLVAACERFEVKCPPPQTTTRLLDKL 463



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 6/115 (5%)

Query: 458 PFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
            F + Q  + S     +        +++L  N  E+       +   V  + F +    +
Sbjct: 476 AFIINQPEIMSPLAKWHRSKPGLTERFELFVNKHELCDAYTELNDPVVQRERFESQLKDR 535

Query: 516 EVVENRFGGLYR----AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +  ++           A + G+PP GG   GIDR+VMLL  ++N++EV LFP  +
Sbjct: 536 QSGDDEAMAFDETFCTALEYGLPPTGGWGMGIDRLVMLLTDSQNIKEVLLFPAMK 590


>gi|26355297|dbj|BAC41133.1| unnamed protein product [Mus musculus]
          Length = 595

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/287 (21%), Positives = 118/287 (41%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 125 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFVHINNKLRRGDIIGV 182

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E        G++ +  Q+I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 183 --EGNPGKTKKGELSIIPQEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 239

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 240 QKFIVRSKIITYIRSFLDELGFLEIETPMMNIIPGGAEAKPFITYHNELDMNLY-MRIAP 298

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E +L 
Sbjct: 299 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMLS 357

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          +I Y          + D   P    ++ E 
Sbjct: 358 GMVKSITGSY-------KITYHPDGPEGQAYEVDFTPPFRRISMVEE 397



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 477 KGGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 536

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 537 YGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMK 572


>gi|145641686|ref|ZP_01797263.1| asparaginyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145273733|gb|EDK13602.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 345

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 56/285 (19%), Positives = 100/285 (35%), Gaps = 28/285 (9%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 17  IGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYESEILRLTTGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   AE          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGKVVESPAEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
            ++ E++F    D     E++L+ VF            F     D
Sbjct: 250 MVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVD 294


>gi|313892212|ref|ZP_07825805.1| lysine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119350|gb|EFR42549.1| lysine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 503

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 81/380 (21%), Positives = 141/380 (37%), Gaps = 52/380 (13%)

Query: 6   THSCGDL-----GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           TH   D+      + + G  VR++G +  +R HG   F  +RD     Q+    D     
Sbjct: 38  THRAADVLENAQALEESGEHVRIAGRLMLIRDHGKTAFAVLRDDRSDIQLYFRKDELTEN 97

Query: 61  ---IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
              + K +    ++ ++G V             TG+  +      IL+     P+P    
Sbjct: 98  EWALYKLLDMGDIIGVEGTV---------FKTHTGETTIRVSTYTILTKTLR-PMPEKWH 147

Query: 118 REYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
               +  R++ R++DL     +    +KRT+++N++R       F+E  TP+L       
Sbjct: 148 GLTDKEQRYRMRYVDLICNPQVKDTFIKRTKMLNAIRKWYTDHGFLEVETPVLQPLYGGA 207

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+        + Y L  AP+ Y + L+  G DR F+I   FR+E   +   P EF 
Sbjct: 208 NARPFVTHLNAMDMTMY-LRIAPELYLKRLVVGGIDRVFEITRNFRNEGMDAKHNP-EFT 265

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            ++   ++ + +D ++  E ++                  RICY      Y   + D+  
Sbjct: 266 AMESYQAYGDIEDAIHQTEEIVAECA--------------RICYGSTKFVYEGVELDVTP 311

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
           P     ++E         F    ++                 RA  DR+N        PG
Sbjct: 312 PWPRLTMSEAVKKYTGEDFEAAKTLEEA--------------RAIADRLNVEYGEYEGPG 357

Query: 356 --LAYIFWRLDESGNVAGMG 373
             LA +F    E   V  + 
Sbjct: 358 KILADVFDEYVEDKLVQPIH 377



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 9/167 (5%)

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE--KKIDFAHNPFTM 461
           G+  +      +AR  IA  L +          I+   F E+ E++  + I    +P  +
Sbjct: 327 GEDFEAAKTLEEAR-AIADRLNVEYGEYEGPGKILADVFDEYVEDKLVQPIHITRHPIEV 385

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
               +  L  +D       +++      E+A+G    +      + F      ++  E  
Sbjct: 386 SP--LSKLSADDHR--FTDRFESYIFTRELANGFSEINDPIDQRKRFEIQLADRDDDEAH 441

Query: 522 --FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                  R+ + GMPP GG+  G+DR+ ML+ G+ ++R+V  FP  +
Sbjct: 442 PMDEDFIRSLEYGMPPTGGLGIGLDRLFMLMTGSHSIRDVIFFPTMK 488


>gi|16716381|ref|NP_444322.1| lysyl-tRNA synthetase isoform 2 [Mus musculus]
 gi|20178134|sp|Q99MN1|SYK_MOUSE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|13345380|gb|AAK19309.1| lysyl-tRNA synthetase [Mus musculus]
 gi|23273634|gb|AAH36289.1| Lysyl-tRNA synthetase [Mus musculus]
 gi|74198517|dbj|BAE39740.1| unnamed protein product [Mus musculus]
          Length = 595

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/287 (21%), Positives = 118/287 (41%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 125 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFVHINNKLRRGDIIGV 182

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E        G++ +  Q+I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 183 --EGNPGKTKKGELSIIPQEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 239

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 240 QKFIVRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 298

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E +L 
Sbjct: 299 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMLS 357

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          +I Y          + D   P    ++ E 
Sbjct: 358 GMVKSITGSY-------KITYHPDGPEGQAYEVDFTPPFRRISMVEE 397



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 477 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 536

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 537 YGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMK 572


>gi|261250317|ref|ZP_05942893.1| lysyl-tRNA synthetase (class II) [Vibrio orientalis CIP 102891]
 gi|260939433|gb|EEX95419.1| lysyl-tRNA synthetase (class II) [Vibrio orientalis CIP 102891]
          Length = 510

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/285 (21%), Positives = 127/285 (44%), Gaps = 25/285 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G V   R      FL I++  G  Q  A  D     + K ++ ++     G ++  
Sbjct: 73  VAIAGRVMAKRGP----FLAIQETSGRIQAYAAKD-----VQKELKEKYQGLDIGDIIGV 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                 +    G + ++ +  E+L+ A   PLP        + +R++ R++DL  +   +
Sbjct: 124 KGALHKSG--KGDLYVNMESYELLTKALR-PLPEKFHGLTDQEMRYRQRYVDLIVNQDSR 180

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
              + R+++++++R  M ++ ++E  TP++        AR F+          Y L  AP
Sbjct: 181 EAFIIRSKLVSAIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDMY-LRVAP 239

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GFDR F+I   FR+E   S R   EF  ++   ++ +  D+++  E +L 
Sbjct: 240 ELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLS 298

Query: 259 GVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
            V  +     ++            + R+   DAI++Y  +  +++
Sbjct: 299 TVAMDVLGSTSMPYGDETVEFGGQYARLSMFDAIKQYNPEHAEIQ 343



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E ++         P       + +D       +++    G E+A+G    + ++   + F
Sbjct: 386 EPQLIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAQDQDERF 445

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K+  ++           A + G+PP  G   GIDR+ ML      +R+V LFP 
Sbjct: 446 KAQVNAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFPA 505

Query: 565 SQ 566
            +
Sbjct: 506 MR 507


>gi|260944282|ref|XP_002616439.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238850088|gb|EEQ39552.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 590

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 55/276 (19%), Positives = 115/276 (41%), Gaps = 8/276 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSAC 58
           + +Y +   G+  + DV   V+++G +   R  G  + F  ++ D   +  +    D+  
Sbjct: 108 VEKYSSLKRGE-TLKDV--EVKVTGRIMTKRESGSKLRFYVLKGDGVQVQIMAQAQDAES 164

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EI +             V+     T  A    G++ + A  +++L+      LP     
Sbjct: 165 LEIYEKEHENLRRGDIIGVVGYPGRTSPAKGGEGEVSVFATAVQLLTPCL-HMLPTEHYG 223

Query: 119 EYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
              +  R++ R+LDL  + ++      R+ II+ +R  + + +FIE  TPIL   +    
Sbjct: 224 FKDQEARYRKRYLDLIVNDSVRDRFKVRSAIISYIRKFLDSRDFIEVETPILNVIAGGAT 283

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
               V    +      +  AP+ + + L+  G DR ++I   FR+E       P EF   
Sbjct: 284 AKPFVTHHNDLNMEMFMRIAPELFLKELVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTC 342

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +   ++ +  D+++  E +   + +E +    V+ +
Sbjct: 343 EFYQAYADVYDLMDMTELMFSEMVKEITGDYKVTYH 378



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 4/121 (3%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E E         F  PQ      K +  +     ++++     EI +     +       
Sbjct: 454 ELEDASINPTFIFGHPQMMSPLAKKDRKIPGLCERFEVFVATKEICNAYTELNDPFDQRA 513

Query: 507 AFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F      K+  ++           A + G+PP  G   GIDR+ M L  +  +REV LF
Sbjct: 514 RFEEQARQKDQGDDEAQLIDETFCNALEYGLPPTAGWGCGIDRLAMFLTNSNTIREVLLF 573

Query: 563 P 563
           P
Sbjct: 574 P 574


>gi|251770987|gb|EES51571.1| lysyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 508

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 64/293 (21%), Positives = 117/293 (39%), Gaps = 21/293 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R++G +  +R  G   F  ++D     Q+ A  D+   + A    +   L   G ++   
Sbjct: 70  RIAGRIVLMRKFGKAFFATLQDEGERFQIYAKADALGDDYA----TWAELLDLGDIVGVE 125

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHK 140
                    TG+  L A  + +LS +   PLP           R++ R++DL      H+
Sbjct: 126 GTFFFTK--TGEPTLQATSLTLLSKSIR-PLPDKWHGLSDTEARYRQRYVDLIVTPDTHR 182

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
             V R+ I+  +R  M  E FIE  TP++  +     AR F           + L  AP+
Sbjct: 183 VFVTRSLIVRFIRRFMDGEGFIEVETPMMQPTPGGALARPFSTHHNALDLELF-LRIAPE 241

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G  R ++I   FR+E   +   P EF  ++   ++   +++++  E +L  
Sbjct: 242 LYLKRLIVGGMTRVYEINRNFRNEGVSTRHNP-EFTMMEFYAAYASYEELMDLTERLLSD 300

Query: 260 VFEEFSNGNTVS---------NNFLRICYDDAI-RRYGTDKPDLRNPIIMHNV 302
           +         +            F RI Y D+I   +G    D  +   + ++
Sbjct: 301 LARHIHGTTRLPFGDWEIDLTPPFRRISYLDSIGEAFGLSPEDYFDDRRLLDL 353



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLY 526
            ND       +++L   G E+A+G    +  +  L+ F     S++  +           
Sbjct: 408 ENDPE--VTDRFELFIAGIEVANGFNELNDPDEQLRRFLAQQESRQSGDLEAPPPDYDYV 465

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           RA + G+PP  G   GIDR+VMLL    ++R+V LFP
Sbjct: 466 RALEYGLPPTAGEGIGIDRLVMLLTNQTSIRDVLLFP 502


>gi|212637016|ref|YP_002313541.1| lysyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|226736754|sp|B8CU98|SYK_SHEPW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|212558500|gb|ACJ30954.1| Lysyl-tRNA synthetase, class-2 [Shewanella piezotolerans WP3]
          Length = 500

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/302 (21%), Positives = 135/302 (44%), Gaps = 27/302 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y  H+  +L   DV     ++G V   R      FL I+D  G  Q  A  D     + K
Sbjct: 48  YGHHTKEELEGMDVQR--SIAGRVMAKRGP----FLVIQDVSGRIQAYAGKD-----VQK 96

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +++ +     G ++  + +   +    G + ++ ++ ++L+ A   PLP        + 
Sbjct: 97  DLKATFQGLDIGDIIGVTGKLHLSG--KGDLYVNMEQYQLLTKALR-PLPEKFHGLSDQE 153

Query: 124 IRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R++DL  +   +   + R+++++++R  MI + F+E  TP++ +      AR F 
Sbjct: 154 TRYRQRYVDLIVNEESREAFIMRSKVVSAIRNFMIKKEFMEVETPMMHSIPGGASARPFE 213

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                   + Y L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  ++  M
Sbjct: 214 THHNALDMAMY-LRIAPELYLKRLVVGGFERVFEVNRNFRNEGL-SPRHNPEFTMMEFYM 271

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPD 292
           ++ +  D+++  E +L  +  +      +            + R+   DAI++Y  +   
Sbjct: 272 AYADYKDLMDLTEEMLSSIATDLCGSTQLPYGEHTVDFGGPYARLSMLDAIKKYNPENAT 331

Query: 293 LR 294
           ++
Sbjct: 332 IQ 333



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E ++         P       + ND       +++    G E+A+G    + +E     F
Sbjct: 376 EPQLMQPTFITGYPADISPLARRNDENHFITDRFEFFIGGREVANGFSELNDAEDQDNRF 435

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K+  ++          RA + G+PP  G   GIDR+VML      +R+V LFP 
Sbjct: 436 KAQVDAKDAGDDEAMFYDADYIRALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFPA 495

Query: 565 SQ 566
            +
Sbjct: 496 MR 497


>gi|149064469|gb|EDM14672.1| rCG46601, isoform CRA_a [Rattus norvegicus]
 gi|149064470|gb|EDM14673.1| rCG46601, isoform CRA_a [Rattus norvegicus]
          Length = 515

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/344 (20%), Positives = 127/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + + G 
Sbjct: 92  GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLSDDLCQCYNGVVLSTESSVAVYGT 151

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 152 LNLTPKG----KQAPGGHELSCDFWELVGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 207

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ I    R       + E +TP L  +  EG           + +F  L Q
Sbjct: 208 NMSKILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 265

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   EF  ++ E  F+  +D+L+ +E++
Sbjct: 266 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLSRLEDL 324

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 325 VCDVVDRVLKSPVASIVYDLNPNFKAPKRPFRRMNYSDAIEWLREHDVKKEDG-TFYEFG 383

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           +    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 384 DDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDPRLTE 427



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 432 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 487

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  +L   ++R+V L+P 
Sbjct: 488 ERFLSWILNRYHIRDVCLYPR 508


>gi|116004531|ref|NP_001070623.1| probable asparaginyl-tRNA synthetase, mitochondrial [Danio rerio]
 gi|115313081|gb|AAI24278.1| Zgc:153218 [Danio rerio]
          Length = 485

 Score =  182 bits (463), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/287 (21%), Positives = 112/287 (39%), Gaps = 20/287 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M   +      L   + GS VR+ GWV  VRP    +FL + D   +  +     S    
Sbjct: 31  MISKKMRVSDALACKETGSDVRIQGWVRSVRPQKDNLFLHLNDGSSLQPLQVVASSQL-- 88

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             + +     + I G +     +  N       +EL AQ I+++     +  P   +  +
Sbjct: 89  NTRDLTFGCAVDITGTLEKSPNKRQN-------VELQAQSIKVVGECNPMDFPFKIKERH 141

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           P     ++  L  R +     +  R+    +++       +++  TP++T++  EGA + 
Sbjct: 142 PLEYIRQFPHLRCRTNAFSSMLRIRSEATAAIQSFFRDHGYVQIHTPVITSNDCEGAGEL 201

Query: 181 LVPSRV------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                       +   F+   A      Q    +MA  F   +   P FR E+ +S R  
Sbjct: 202 FQVEPTGDKKDSDDPHFFSVPAYLTVSGQLHLEVMAGAFSAVYTFGPTFRAENSQSRRHL 261

Query: 232 GEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF-SNGNTVSNNFLR 276
            EFY ++ E++F E  DD++  ME++ +   E   SN       F +
Sbjct: 262 AEFYMVEAEIAFTESLDDLMKVMEDLFKAATEHVFSNCTEDVELFHK 308



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 56/151 (37%), Gaps = 25/151 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++        +++++P YE             PF             D     A  
Sbjct: 359 HEKFLVKHCGNTPVFVVNYP-YEL-----------KPFYAR-------DNQDHPRHTAAA 399

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  E+  G +R    +++ Q  S  G+     E+ +    +  + G  PHGG  
Sbjct: 400 VDLLVPGVGELCGGSLREERLQLLTQRLSQAGL-----EDTYAWYLQLREFGSVPHGGFG 454

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G +R +  +LG  N+++   F    + C L
Sbjct: 455 MGFERYLQCILGLNNIKDAIPFARFSHSCQL 485


>gi|15602508|ref|NP_245580.1| asparaginyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720918|gb|AAK02727.1| AsnS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 471

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 128/388 (32%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFEI-AKSVRSEWVLC 72
           +G  V + GW+   R    G+ FL I D       Q + N D   +E     + +   + 
Sbjct: 21  IGETVTVRGWIRTRRDSKAGLSFLAIYDGSCFDPIQAIVNNDIENYETEVLRLTTGCSVI 80

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   AE          +EL A+K+E+    E+        + +      +   L 
Sbjct: 81  VTGTVVESPAEGQA-------VELQAEKVEVAGWVEDPETYPMAAKRHSIEYLREVAHLR 133

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 134 PRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 193

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 194 RDDKGAVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 253

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           N ++++F
Sbjct: 254 MVEPEIAFATLADNAKLAEDMLKYVFRAVLEERKDDLKFFEKHVDNDVISRLENFINSDF 313

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH  +     F   + V    +       
Sbjct: 314 AQIDYTDAIEVLLQSGKKFEFPVSWGIDLSSEHERYLAEEHFKSPVVVKNYPKDI----- 368

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 369 KAFYMRLNDDGKTVAAMDVLAPGIGEII 396



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 71/221 (32%), Gaps = 37/221 (16%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL-DMQDGDSCFFIAGDPLKFCSFAA 414
           L Y+F  + E           K         +  RL +  + D       D ++    + 
Sbjct: 275 LKYVFRAVLEERKDD-----LKFFEKHVDNDVISRLENFINSDFAQIDYTDAIEVLLQSG 329

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM----PQGGMES-- 468
                            F   W +D      + E ++     +  +              
Sbjct: 330 -------------KKFEFPVSWGID-----LSSEHERYLAEEHFKSPVVVKNYPKDIKAF 371

Query: 469 -LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
            ++ ND     A   D++  G  EI  G  R    +V+ +    +G++       +    
Sbjct: 372 YMRLNDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDKRMIEMGLNP----EDYWWYR 426

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              + G  PH G   G +R+++ + G +N+R+V  FP S  
Sbjct: 427 DLRRYGTVPHAGFGLGFERLIVYVTGVQNIRDVIPFPRSPR 467


>gi|259908902|ref|YP_002649258.1| asparaginyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224964524|emb|CAX56034.1| Asparaginyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283478896|emb|CAY74812.1| asparaginyl-tRNA synthetase [Erwinia pyrifoliae DSM 12163]
 gi|310767197|gb|ADP12147.1| asparaginyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 466

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 123/385 (31%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI F+ + D      V A  +++       V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFIAVYDGSCFNPVQAVVNNSLNNYQDEV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A ++E++   ++        + +      +   L  R 
Sbjct: 72  CSVVITGKVVASPGQGQSFEIQATEVEVVGWVDDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDMENLPRTP 191

Query: 188 ------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      AS   + +   P FR E+  + R   EF+ L+
Sbjct: 192 EGKVNYDEDFFGKEAFLTVSGQLNGETYASAISKIYTFGPTFRAENSHTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--------------LRICYDDAIR 284
            EM+F + +D     E +L+  F+           F                +  D A  
Sbjct: 252 PEMAFADLEDNAALAEAMLKYAFKAVLTERADDMAFFAERVDKDAVSRLERFVTTDFAQV 311

Query: 285 RYGT-------DKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y               NP+   +   +EH  +   + F   + V    +          
Sbjct: 312 NYTEAVEILLASGQKFENPVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    EV+    + +G++K      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEVLDARLAEMGLNK----EDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 426 YGTVPHSGFGLGFERLIAYVTGVQNVRDVIAFPRTPR 462


>gi|153003984|ref|YP_001378309.1| lysyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152027557|gb|ABS25325.1| lysyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 520

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/252 (24%), Positives = 102/252 (40%), Gaps = 19/252 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVM 78
            ++G V  VRP G   FL +RD  G  QV    D      FEI K +    ++   G   
Sbjct: 71  SIAGRVLAVRPFGKAAFLKVRDAAGELQVWLKKDRLPERDFEIYKQLDIGDIVAAQG--- 127

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDT 137
                       TG++ L A    IL+ +   PLP           R++ R+LDL     
Sbjct: 128 ------GATRTKTGELTLEASGFTILTKS-MRPLPEKWHGLTDVEQRYRQRYLDLVATPG 180

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA---SSPEGARDFLVPSRVNQGSFYAL 194
           +    VKR RI++++R  +    ++E  TP L     +    AR F             L
Sbjct: 181 VRDTFVKRARIVSTIRRFLDGRGYLEVETPTLHKPEEAGGAAARPFETHHNALDLDL-KL 239

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             A + + + L+  GFDR ++I   +R+E     R   EF  ++   ++   +D++   E
Sbjct: 240 RIATELHLKRLVVGGFDRVYEIGRIWRNEGID-RRHNPEFTSIEFYQAYATAEDLMRLTE 298

Query: 255 NVLRGVFEEFSN 266
            +   +  E + 
Sbjct: 299 ELFHALAVEVTG 310


>gi|145629371|ref|ZP_01785169.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145638871|ref|ZP_01794479.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|144978214|gb|EDJ87978.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145271843|gb|EDK11752.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309750848|gb|ADO80832.1| Asparaginyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 467

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 75/429 (17%), Positives = 137/429 (31%), Gaps = 68/429 (15%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 17  IGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYESEILRLTTGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   AE          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGKVVESPAEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           N V+++F
Sbjct: 250 MVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENFVNSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH        F   + V    +       
Sbjct: 310 AQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
                R   D     A     PG+  I            +G   +   +   +     + 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEI------------IGGSQREERLEVLDKRMEEMG 412

Query: 393 MQDGDSCFF 401
           +   D  ++
Sbjct: 413 LNPDDYWWY 421



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    EV+ +    +G++ +             +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEVLDKRMEEMGLNPDDYW----WYRDLRK 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 427 YGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPR 463


>gi|332882681|ref|ZP_08450293.1| lysine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332679481|gb|EGJ52466.1| lysine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 562

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 58/293 (19%), Positives = 116/293 (39%), Gaps = 20/293 (6%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L   + G  V ++G +  +R  G   F  ++D  G  Q+  N D  C +  K++ +E   
Sbjct: 39  LTHYEEGKEVIVAGRLMSLRVQGKASFATLQDSEGSVQLYFNRDEMCPDEDKTLYNEVFK 98

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESI 124
            +  L      E        G+  +  +   +LS           + +            
Sbjct: 99  KLLDLGDFIGVEGYLFITKMGEKTVMVKNFTLLSKVLRPLPMPKVDADGKVHDAFTDPEQ 158

Query: 125 RFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182
           R++ R++DL  +   K   +KRT++ N+MR       ++E  TP+L A      AR F+ 
Sbjct: 159 RYRMRYVDLVVNPQVKEVFIKRTKLFNAMRQFFNEAGYLEVETPVLQAIPGGASARPFIT 218

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ ++
Sbjct: 219 HHNALDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVA 276

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY 286
           + + + +++  E +L       +                 + R+   DAI+++
Sbjct: 277 YKDYNWMMDFTERLLEHCAIAVNGTTKATFGAHTVDFKAPYPRVTMTDAIKQF 329



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 372 EGNFIQPTFITDYPKEMSPLTKEHRDNPELTERFELMVCGKEIANAYSELNDPIDQRERF 431

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  E  ++          RA + GMPP  G+  G+DR++M L   ++++EV  FP 
Sbjct: 432 EEQLRLSEKGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLIMFLTNNESIQEVLFFPQ 491

Query: 565 SQ 566
            +
Sbjct: 492 MR 493


>gi|326692382|ref|ZP_08229387.1| lysyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 493

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 69/329 (20%), Positives = 131/329 (39%), Gaps = 23/329 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCIDGLV 77
            V ++G +   R  G IIF D+RD  G  Q+ A  D     + I K       L + G++
Sbjct: 61  EVVIAGRMIAKRGAGKIIFADLRDVSGKIQIYAKRDDLGDNYPIIKRADLGDFLGVKGIM 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           M   A         G++ +   ++  L+ A   P+P           R++ R+LDL  + 
Sbjct: 121 MKTEA---------GELTVLVTELTHLTKALR-PMPDKFHGIADVETRYRKRYLDLIANE 170

Query: 138 LHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
                   R++II+++R  M +++F+E  TPIL T +    AR F+          Y + 
Sbjct: 171 DSFKKFQLRSKIISAIRAYMDSQDFMEVETPILQTEAGGAAARPFITHHNALNIDMY-MR 229

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + Y + L+  G++R ++I   FR+E       P EF  ++   ++++  D+++  E 
Sbjct: 230 IATELYLKRLVVGGYERVYEIGRIFRNEGMDPKHNP-EFTTMETYAAYMDFTDVMDETEG 288

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           + +      S+        L++ Y       G+         ++   T      +  V  
Sbjct: 289 IFKAAAAVVSDD-------LKVTYQGTEIDLGSKFARKHMVDLIKEQTGVDFWQDMSVED 341

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                +  +  +      G    AF +  
Sbjct: 342 AQKLADEHHVKYEKYWGVGHIINAFFEEF 370



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 6/105 (5%)

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENR 521
           +      D       +++L   G E  +     +        F      +E      EN 
Sbjct: 391 LAKRNAEDPR--FTDRFELFIMGSEYGNAFTELNDPIDQRARFEAQVAERENGNDEAENI 448

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                 A + GMPP GG+  GIDR+VMLL  +  +R+V LFP  +
Sbjct: 449 DEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSDTIRDVLLFPTMR 493


>gi|315607902|ref|ZP_07882895.1| lysine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250371|gb|EFU30367.1| lysine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 602

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 110/274 (40%), Gaps = 10/274 (3%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F +++D  G  QV    D  C E  K + ++    +  +  
Sbjct: 71  REVVIAGRLMGRRVMGKASFAELQDSKGRIQVYIARDEICPEENKDLYNKVFKKLLDIGD 130

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFKYRFLD 132
               +       TG+I + A+ + +LS + +    V  +      +     +R + R++D
Sbjct: 131 FIGVKGFVFRTQTGEISVHAKSLTLLSKSLKPLPVVKYKDGVAYDKFDDPEMRARQRYVD 190

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +  +    +KR  ++ +MR       + E  TP L + +    AR F+         
Sbjct: 191 LVVNEGVKDTFLKRATVLRTMRRFFDEAGYTEVETPTLQSIAGGASARPFITHFNALNVD 250

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + ++
Sbjct: 251 MY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKYHNP-EFTCMELYVQYKDYNWMM 308

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
              E +L  +    +    V N    I +    R
Sbjct: 309 AFTERLLETICTAVNGTTEVKNGDNVISFKAPFR 342


>gi|212690764|ref|ZP_03298892.1| hypothetical protein BACDOR_00251 [Bacteroides dorei DSM 17855]
 gi|237708148|ref|ZP_04538629.1| asparaginyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|237723683|ref|ZP_04554164.1| asparaginyl-tRNA synthetase [Bacteroides sp. D4]
 gi|265756804|ref|ZP_06090792.1| asparaginyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212666641|gb|EEB27213.1| hypothetical protein BACDOR_00251 [Bacteroides dorei DSM 17855]
 gi|229437894|gb|EEO47971.1| asparaginyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|229457701|gb|EEO63422.1| asparaginyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263233590|gb|EEZ19210.1| asparaginyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 467

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/295 (21%), Positives = 109/295 (36%), Gaps = 29/295 (9%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L   D G+ V + GWV   R    + F+ + D   I  V    D A F
Sbjct: 1   MEKISRTKIVDLLKCRDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQIVVDLANF 60

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+ K + +   + ++G +         A       E+ A+ IE+L   +    P+  +
Sbjct: 61  DEEMLKQITTGACISVNGELTESIGSGQAA-------EVQARGIEVLGTCD-NTYPLQKK 112

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R +   L  R +T       R  +  ++        F    TPI+TAS  EGA
Sbjct: 113 GHTMEFLR-EIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPIITASDCEGA 171

Query: 178 RDFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
                 +  N                 F+    +     Q +  L A+     +   P F
Sbjct: 172 GQMFQVTTKNLYDLKKDENGAIIYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F +  D ++  E+ ++   +   +       FL
Sbjct: 232 RAENSNTPRHLAEFWMIEPEVAFNDITDNMDLAEDFIKYCVQWALDNCYDDVKFL 286



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P     +E K        F M Q         D  +++A  
Sbjct: 342 HERYLVEEHFKRPVILTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 382

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R    + ++     + I  + +           + G  PH G   
Sbjct: 383 V-LFPKIGEIIGGSEREADYDKLMTRIQELEIPMKDMW----WYLDTRKFGSCPHSGFGL 437

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G  N+R+V  FP +  
Sbjct: 438 GFERLLLFVTGMTNIRDVIPFPRTPR 463


>gi|157146376|ref|YP_001453695.1| asparaginyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|157083581|gb|ABV13259.1| hypothetical protein CKO_02135 [Citrobacter koseri ATCC BAA-895]
          Length = 492

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 126/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 42  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 97

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A  +E+    E+        + +      +   L  R 
Sbjct: 98  CSVIVTGKVVASPGQGQSFEIQATTVEVTGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 157

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 158 NMIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 217

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 218 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 277

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +D+    E +L+ VF+   +                        +  +F ++
Sbjct: 278 PEVAFANLNDVAGLAEAMLKYVFKAVLDERADDMKFFAERVDKDAISRLERFIDADFAQV 337

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 338 DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 392

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 393 YMRLNEDGKTVAAMDVLAPGIGEII 417



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++K      +      
Sbjct: 396 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDL 449

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 450 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 488


>gi|148827002|ref|YP_001291755.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166231667|sp|A5UF16|SYN_HAEIG RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148718244|gb|ABQ99371.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 467

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 75/429 (17%), Positives = 137/429 (31%), Gaps = 68/429 (15%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 17  IGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYESEILRLTTGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   AE          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGKVVESPAEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RSENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           N V+++F
Sbjct: 250 MVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENFVNSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH        F   + V    +       
Sbjct: 310 AQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
                R   D     A     PG+  I            +G   +   +   +     + 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEI------------IGGSQREERLEVLDKRMEEMG 412

Query: 393 MQDGDSCFF 401
           +   D  ++
Sbjct: 413 LNPDDYWWY 421



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    EV+ +    +G++ +             +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEVLDKRMEEMGLNPDDYW----WYRDLRK 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 427 YGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPR 463


>gi|108709562|gb|ABF97357.1| Lysyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 528

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 128/346 (36%), Gaps = 35/346 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           + +Y++ + GD     V     L+G +   R     ++F D+       QV A+  ++  
Sbjct: 41  IEKYKSMNVGD---KLVDVTECLAGRIMTKRAQSSKLLFYDLYGGGEKVQVFADARTSEL 97

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E  + ++    L    +V              G++ +  +KI +LS    +      E  
Sbjct: 98  EDNEFIKFHSTLKRGDIV---GVCGYPGKSKRGELSIFPKKIVVLSPCLHMMPRQKSEGS 154

Query: 120 Y-------------------PESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE 159
                                +  R++ R+LDL  +  +      R+++++ +R  +   
Sbjct: 155 AVPTPWAPGMGRNIEKYVLRDQETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDGL 214

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
           +F+E  TP++   +   A    V           +  AP+ Y + L+  G DR ++I   
Sbjct: 215 DFLEVETPMMNMIAGGAAARPFVTHHNELNMRLYMRIAPELYLKELVVGGLDRVYEIGKQ 274

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           FR+E       P EF   +  M++ + +D++   E +L G+ +E + G        +I Y
Sbjct: 275 FRNEGIDLTHNP-EFTTCEFYMAYADYNDLIELTETMLSGMVKELTGGY-------KIKY 326

Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                     + D   P    ++ E           K LS +   +
Sbjct: 327 HANGVEKPPIEIDFTPPFRKIDMIEELEAMAKLNIPKDLSSDEANK 372


>gi|329121809|ref|ZP_08250425.1| lysine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327468082|gb|EGF13570.1| lysine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 500

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/306 (21%), Positives = 123/306 (40%), Gaps = 31/306 (10%)

Query: 6   THSCGDL-----GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           TH   D+      + + G  VRL+G +  +R HG   F  +RD     Q+    D     
Sbjct: 38  THRAADVLENAQALEESGEHVRLAGRLMLIRDHGKTAFAVLRDDRSDIQLYFRKDELTEN 97

Query: 61  ---IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
              + K +    ++ ++G V             TG+  +      IL+     P+P    
Sbjct: 98  EWALYKLLDMGDIIGVEGTV---------FKTHTGETTIRVSTYTILTKTLR-PMPEKWH 147

Query: 118 REYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
               +  R++ R++DL     +    +KRT+++N++R       F+E  TP+L       
Sbjct: 148 GLTDKEQRYRMRYVDLICNPQVKDTFIKRTKMLNAIRKWYTDHGFLEVETPVLQPLYGGA 207

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+        + Y L  AP+ Y + L+  G DR F+I   FR+E   +   P EF 
Sbjct: 208 NARPFVTHLNAMDMTMY-LRIAPELYLKRLVVGGIDRVFEITRNFRNEGMDAKHNP-EFT 265

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------SNNFLRICYDDAIRRY 286
            ++   ++ + +D ++  E ++                      +  + R+   +A+++Y
Sbjct: 266 AMESYQAYGDIEDAIHQTEEIVAECARICYGSTKFVYEGVELDVTPPWPRLTMSEAVKKY 325

Query: 287 GTDKPD 292
             +  D
Sbjct: 326 TGEDFD 331



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 9/167 (5%)

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE--KKIDFAHNPFTM 461
           G+         +AR  IA  L +          I+   F E+ E++  + I    +P  +
Sbjct: 327 GEDFDAAKTLEEAR-AIADRLNVEYGEYEGPGKILADVFDEYVEDKLVQPIHITRHPIEV 385

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
               +  L  +D       +++      E+A+G    +      + F      ++  E  
Sbjct: 386 SP--LSKLSADDHR--FTDRFESYIFTRELANGFSEINDPIDQRKRFEIQLADRDDDEAH 441

Query: 522 --FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                  R+ + GMPP GG+  G+DR+ ML+ G+ ++R+V  FP  +
Sbjct: 442 PMDEDFIRSLEYGMPPTGGLGIGLDRLFMLMTGSHSIRDVIFFPTMK 488


>gi|26354188|dbj|BAC40722.1| unnamed protein product [Mus musculus]
          Length = 595

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/287 (21%), Positives = 118/287 (41%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 125 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFVHINNKLRRGDIIGV 182

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E        G++ +  Q+I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 183 --EGNPGKTKKGELSIIPQEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 239

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 240 QKFIVRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 298

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E +L 
Sbjct: 299 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMLS 357

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          +I Y          + D   P    ++ E 
Sbjct: 358 GMVKSITGSY-------KITYHPDGPEGQAYEVDFTPPFRRISMVEE 397



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 477 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 536

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 537 YGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMK 572


>gi|67623847|ref|XP_668206.1| Kars protein [Cryptosporidium hominis TU502]
 gi|54659397|gb|EAL37975.1| Kars protein [Cryptosporidium hominis]
          Length = 532

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 100/559 (17%), Positives = 174/559 (31%), Gaps = 112/559 (20%)

Query: 16  DVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           D  + + LSG V  +R     +IF DI       Q++AN         +   S   +   
Sbjct: 65  DKDTTLSLSGRVTSIRSSSSKLIFYDIFCEEQKVQIIANIMEHDISTGEFSVSHSEIRRG 124

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            +V              G++ L ++ + +LS      LP        + +R++ R+LDL 
Sbjct: 125 DVVGFTG---FPGKSKRGELSLFSKSVVLLSPCY-HMLPTAISGLKDQEVRYRQRYLDLM 180

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFY 192
            +   + + K R+R I  +R       F+E  TP+L        AR F+      +   Y
Sbjct: 181 LNEESRKVFKLRSRAIKYIRNYFDRLGFLEVETPMLNMIYGGAAARPFITYHNELETQLY 240

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y + L+  G D+ ++I   FR+E                          ++ 
Sbjct: 241 -MRIAPELYLKQLIVGGLDKVYEIGKNFRNEG-------------------------IDL 274

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
             N                  F  + +  A   Y            + ++TE  +     
Sbjct: 275 THN----------------PEFTAMEFYMAYADY----------YDLMDLTEELISGLVL 308

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
                L +            G  G     D    W R        + F    ESG     
Sbjct: 309 EIHGSLKI-------PYHPDGPEGKCIEIDFTTPWKR--------FSFVEEIESGLGE-- 351

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
             + + L+        V +  +           P            H       +   C 
Sbjct: 352 -KLKRPLDSQENIDFMVEMCEKH----KIELPHPRTAAKLLDKLAGHF------VETKCT 400

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              +I+D                 +P TM        +  +       +++L   G E+ 
Sbjct: 401 NPSFIID-----------------HPQTMSPLAKWHREKPE----MTERFELFVLGKELC 439

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +     +      + F     +K   +            A + G+PP GG   GIDR++M
Sbjct: 440 NAYTELNEPLQQRKFFEQQADAKASGDVEACPIDETFCLALEHGLPPTGGWGLGIDRLIM 499

Query: 549 LLLGAKNVREVSLFPMSQN 567
            L    N++EV LFP  +N
Sbjct: 500 FLADKNNIKEVILFPAMRN 518


>gi|297563902|ref|YP_003682875.1| lysyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848351|gb|ADH70369.1| lysyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 500

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 60/316 (18%), Positives = 120/316 (37%), Gaps = 27/316 (8%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           R+ S G +             G+ V ++G V   R  G + F  +RD  G  Q++ + D 
Sbjct: 40  RSTSIGAVRDKHQGLEPDTRTGAEVSVAGRVMLYRTGGKLCFATLRDETGDIQIMLSLDQ 99

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E   + +++  L   G  +    E I +    G++ +      + +     PLP   
Sbjct: 100 VGRERLDAWKADVDL---GDHVGVEGEVITSR--RGELSILVTSWTLTAKCLR-PLPEKH 153

Query: 117 EREYPESIRFKYRFLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
           +       R + R++DL  +    + + +R+  I ++R  + + +F+E  TP+L      
Sbjct: 154 KGLTDPEARVRQRYVDLIVNPESQQMVRRRSAAIRAIREGLASRDFVEVETPMLMRVHGG 213

Query: 176 G-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F           Y L  AP+   + L+  G ++ F++   FR+E   S   P EF
Sbjct: 214 ATARPFTTHINAYDMDLY-LRIAPELSLKRLVVGGLEKVFEVNRNFRNEGADSTHNP-EF 271

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRR 285
             L+   ++ + + + +    +++           V            + ++    A+  
Sbjct: 272 TMLEFYQAYADYNVMADLTRELIQEAARAVFGSTVVERDGRTYDLGGEWPQVTLYGAVSE 331

Query: 286 YGTDKPDLRNPIIMHN 301
               + D R PI    
Sbjct: 332 ALGAEVDPRTPIDEVR 347



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 59/161 (36%), Gaps = 28/161 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                H+ +EL  +     +  ++ DFP               +P T        L    
Sbjct: 364 GKLVEHVFEEL--VEHTLVQPTFVRDFP------------VETSPLTRQHREDPLL---- 405

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
                  ++DL+  G E+ +G           +  +   +     +           RA 
Sbjct: 406 -----TEKWDLIGFGMEMGTGYSELVDPVEQRERLTRQSLMAAEGDPEAMQLDEDFLRAL 460

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           + GMPP GG+  GIDR++M   G KN+RE  LFP+ +   D
Sbjct: 461 EYGMPPTGGVGVGIDRLLMAFTG-KNIRETVLFPLVKPSGD 500


>gi|216263861|ref|ZP_03435855.1| asparaginyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215979905|gb|EEC20727.1| asparaginyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 462

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 74/379 (19%), Positives = 137/379 (36%), Gaps = 51/379 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEI--AKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +   Q V N +   F+    K++ +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFDEKDLKNLTTGASIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N  I T           ++  A+    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQNYEIKTCG-------FNVIGEADPKTYPLQKKRHTFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------ 186
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAVARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKPN 185

Query: 187 -------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NDLGNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR-------------------- 276
           ++ EM+F + +D +   E++L+ +     N  +   +FL                     
Sbjct: 246 IEPEMAFYKLNDNITLAEDLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFE 305

Query: 277 -ICYDDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
            I Y  AI    + K +    P    ++ TEH        F K + V    + +      
Sbjct: 306 VITYTKAIEILESSKKNFEIKPYWGIDLQTEHERFLTEETFKKPVVVIDYPKNFKAFYMK 365

Query: 334 GGGNRAFCDRMNEWARSQG 352
              +      M+      G
Sbjct: 366 INKDNKTVKGMDVLVPKIG 384



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 379 LVPKIGEIIGGSEREDNLQKLENRIKELNLNI----EHLNWYLDLRRFGSTPHSGFGLGL 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R V    G  N+R+   FP +  
Sbjct: 435 ERFVQYSTGISNIRDSIPFPRTPK 458


>gi|288549447|ref|ZP_05967122.2| hypothetical protein ENTCAN_05502 [Enterobacter cancerogenus ATCC
           35316]
 gi|288319123|gb|EFC58061.1| asparagine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 492

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 69/388 (17%), Positives = 132/388 (34%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSEWVLC 72
           V   V + GWV   R    GI FL + D      V A  +++     +    + +   + 
Sbjct: 42  VDQEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNDDVLHLTTGCSVI 101

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G+V++   +  +        E+ A  IE+    E+        + +      +   L 
Sbjct: 102 VTGVVVASPGQGQS-------FEIQASAIEVTGWVEDPDTYPMAAKRHSIEYLREVAHLR 154

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R + +      R  +  ++      + +   STP++TAS  EGA +    S ++  +  
Sbjct: 155 PRTNLIGAVARVRHTLAQALHRFFDEQGYFWVSTPLITASDTEGAGEMFRVSTLDMENLP 214

Query: 193 ALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
             P+    Y +                    A    + +   P FR E+  + R   EF+
Sbjct: 215 RTPEGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFW 274

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            L+ E++F + +D+    E +L+ VF+                            VS +F
Sbjct: 275 MLEPEVAFADLNDVAGLAEAMLKYVFKAVLEERADDMKFFAERVDNDAIARLERFVSADF 334

Query: 275 LRICYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            ++ Y DA+           NP+    ++ +EH  +   + F   + V    +       
Sbjct: 335 AQVDYTDAVAILEKCGEKFENPVYWGVDLSSEHERYLAEKHFKAPVVVKNYPKDI----- 389

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 390 KAFYMRLNEDGKTVAAMDVLAPGIGEII 417



 Score = 77.8 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      +G++       +G     
Sbjct: 396 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMEEMGLNPAD----YGWYRDL 449

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 450 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 488


>gi|296413547|ref|XP_002836472.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630296|emb|CAZ80663.1| unnamed protein product [Tuber melanosporum]
          Length = 618

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/335 (18%), Positives = 122/335 (36%), Gaps = 28/335 (8%)

Query: 20  FVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
            VR++G +H +R  G  + F D+R      QVVA    A  +            I G+V 
Sbjct: 131 EVRVAGRIHGIRSAGSRLRFYDLRAEGVKIQVVAQGQEAVGDYQAQHEYLHRGDIIGIVG 190

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDT 137
                        G+  + A+++ +LS      LP        +  R++ R+LDL   ++
Sbjct: 191 FPGRTNPKKADNPGEFSIFAKEVVLLSPCL-HMLPTEHFGLKDQETRYRQRYLDLIMNNS 249

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                V R++I++ +R       F+E  TP++ A +        +    +      +  A
Sbjct: 250 TRDIFVTRSKIVSYVRRYFDERAFVEVETPMMNAIAGGATAKPFITHHNDLNMDLFMRVA 309

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y ++L+  G +R ++I   FR+E       P EF   +   ++ + +D+L+  E ++
Sbjct: 310 PELYLKMLVVGGLERVYEIGRQFRNEGIDLTHNP-EFTTCEFYWAYADVNDLLDITEELV 368

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
             + +  +       +          + Y  D       I M    E             
Sbjct: 369 SEMVKCITGSYRTKFH------TQGGKVYEVDWERPWKRIEMMTALEVATG--------- 413

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
                       P       +A  + + E A++ G
Sbjct: 414 ---------RKFPPGDQLHTKATNEFLKEVAKAHG 439



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 4/91 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++      EI +     +        F      K+  ++           + + 
Sbjct: 488 PGLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQANQKDQGDDEAQLIDENFCTSLEY 547

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+PP GG   GIDR+VM L    +++EV  F
Sbjct: 548 GLPPTGGWGMGIDRLVMFLTDNYSIKEVLAF 578


>gi|261868080|ref|YP_003256002.1| asparaginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413412|gb|ACX82783.1| asparaginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 467

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 124/388 (31%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D A +E     + +   + 
Sbjct: 17  IGEKVTVRGWVRTRRDSKAGLSFLAVYDGSCFAPIQAIVNNDIANYESEVLRLTAGCSVV 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   AE          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGTVVESPAEGQA-------VELQAEKVEVTGWVEDPETYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RTDKGAVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-------------------- 275
            ++ E++F    D     E++L+ VF            F                     
Sbjct: 250 MIEPEVAFATLADNAKLAEDMLKYVFRAVLAERRDDLEFFAKHVDGDVINRLERFINSDF 309

Query: 276 -RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            ++ Y DAI            P+   +   +EH  +     F   + V    +       
Sbjct: 310 AQVDYTDAIEILLKSGKTFEFPVSWGIDLSSEHERYLAEDYFKSPVVVKNYPKEI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 365 KAFYMRLNDDGQTVAAMDVLAPGIGEII 392



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D++  G  EI  G  R    +V+ +  + +G++       +       + G  PH G   
Sbjct: 382 DVLAPGIGEIIGGSQREERLDVLDKRMAEMGLNP----EDYWWYRDLRRYGTVPHSGFGL 437

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G +N+R+V  FP +  
Sbjct: 438 GFERLIVYVTGLQNIRDVIPFPRAPR 463


>gi|271500177|ref|YP_003333202.1| asparaginyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270343732|gb|ACZ76497.1| asparaginyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 466

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 128/385 (33%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI F+ + D      + A  ++        +    +    G
Sbjct: 16  VDSDVTVRGWVRTRRDSKAGISFIAVYDGSCFDSLQAVVNNNLANYQSDI----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL A +++++   ++        + +      +   L  R 
Sbjct: 72  CSVEVTGKVVESPGEGQSFELLATELKVVGWVDDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++        F   STPI+TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQAIHRFFHQNGFYWVSTPIITASDTEGAGEMFRVSTLDLENLPRDD 191

Query: 189 -------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 QGKVDFSEDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMIE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   DD+    EN+L+ VF+                            V+++F ++
Sbjct: 252 PEVAFATLDDVAALAENLLKFVFKAVLEERADDMKFFAERVDKDAVSRLERFVTSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI           NP+   +   +EH  +   + F   + V    +          
Sbjct: 312 DYTDAITILENCGQTFENPVSWGIDLSSEHERYLAEKHFQAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRMNNDGKTVAAMDVLAPGIGEII 391



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 42/120 (35%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    E +   
Sbjct: 347 EKHFQAPVVVKNYPKDIKAFYMRMNNDGKTVAAMDVLAPGIGEIIGGSQREERLEQLDIR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              +G+SK      +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 407 LEEMGLSK----EDYWWYRDLRRYGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|242033765|ref|XP_002464277.1| hypothetical protein SORBIDRAFT_01g015530 [Sorghum bicolor]
 gi|241918131|gb|EER91275.1| hypothetical protein SORBIDRAFT_01g015530 [Sorghum bicolor]
          Length = 613

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 130/346 (37%), Gaps = 35/346 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACF 59
           + ++ T S G+  ++DV     L+G +   R     + F D+       QV+A+  ++  
Sbjct: 126 IEKFNTLSNGE-KLTDV--TECLAGRIMNKRTSSSKLFFYDLYGGGMKVQVMADARTSEL 182

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A+           G ++  +     +N   G++ +  +K  +LS    +     GE  
Sbjct: 183 DEAE-FSKYHSGVKRGDIVGIAGYPGKSN--RGELSVFPKKFVVLSPCLHMMPRQKGEGS 239

Query: 120 Y-------------------PESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAE 159
                                +  R++ R+LDL  +  +      R+++++ +R  +   
Sbjct: 240 AVPVPWTPGMGRNIENYVLRDQETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDER 299

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
            F+E  TP++   +   A    V           +  AP+ Y + L+  G DR ++I   
Sbjct: 300 EFLEVETPMMNMIAGGAAARPFVTHHNELNMRLFMRIAPELYLKELVVGGLDRVYEIGKQ 359

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           FR+E       P EF   +  M++ + +D++   E +L G+ +E + G        +I Y
Sbjct: 360 FRNEGIDLTHNP-EFTTCEFYMAYADYNDLMELTETMLSGMVKELTGGY-------KIKY 411

Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                     + D   P    ++ +           K LS +    
Sbjct: 412 HANGVMNPPIEIDFTPPFRRIDMIKDLEVVANLNIPKDLSSDEANR 457


>gi|281178061|dbj|BAI54391.1| asparaginyl-tRNA synthetase [Escherichia coli SE15]
          Length = 466

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 127/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +     Q E+ A K+E+    E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPNTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +DI    E +L+ VF+                            +  +F ++
Sbjct: 252 PEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+ +    +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|254572159|ref|XP_002493189.1| Lysyl-tRNA synthetase [Pichia pastoris GS115]
 gi|238032987|emb|CAY71010.1| Lysyl-tRNA synthetase [Pichia pastoris GS115]
 gi|328352796|emb|CCA39194.1| lysyl-tRNA synthetase, class II [Pichia pastoris CBS 7435]
          Length = 588

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 109/260 (41%), Gaps = 11/260 (4%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCID 74
             V ++G +H  R  G  + F  +       Q++A   + D    ++ + +R   ++ + 
Sbjct: 123 ETVSVAGRIHAKRESGSKLKFYVLHGEGVQVQIMAQAQDADGDYEKMHELLRRGDIIGVT 182

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G        T  A    G+I + A+K+++L+      LP        +  R++ R+LDL 
Sbjct: 183 GY----PGRTSPAKGGEGEISVFARKVKLLTPCL-HMLPTDHFGFKDQEARYRKRYLDLI 237

Query: 135 RDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +   ++    R++II+ +R      +FIE  TP++   +        +    +      
Sbjct: 238 MNDATRDRFKIRSKIISYIRRFFDERDFIEVETPMMNVIAGGATAKPFITHHNDLNIDMY 297

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  AP+ + + L+  G DR ++I   FR+E       P EF   +   ++ +  D++ T 
Sbjct: 298 MRVAPELFLKELVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMETT 356

Query: 254 ENVLRGVFEEFSNGNTVSNN 273
           E +   + +E +    +   
Sbjct: 357 ELLFSEMVKEITGDYKIPYQ 376



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 44/121 (36%), Gaps = 4/121 (3%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E E         F  PQ      K +  +     ++++     EIA+     +       
Sbjct: 452 ELEDTCTNPTFIFGHPQMMSPLAKYDREIPGLCERFEVFVATKEIANAYTELNDPFDQRS 511

Query: 507 AFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F      K+  ++           A + G+PP  G   GIDR+ M L  +  +REV LF
Sbjct: 512 RFEEQARQKDQGDDEAQLIDEIFCNALEYGLPPTAGWGCGIDRLAMFLTNSNTIREVLLF 571

Query: 563 P 563
           P
Sbjct: 572 P 572


>gi|330752646|emb|CBL87590.1| lysyl-tRNA synthetase [uncultured Flavobacteria bacterium]
          Length = 563

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/316 (20%), Positives = 130/316 (41%), Gaps = 21/316 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +   V ++G +   R  G   F +++D  G  Q+  N D  C    K+  +E+   +  +
Sbjct: 45  IDKKVVIAGRLMSRRIQGNASFAELQDSKGKIQLYFNRDEICPNNDKTYYNEFYKKLLDI 104

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKYR 129
                 E +      G+  +  +  ++LS + +       + E           +R++ R
Sbjct: 105 GDIIGVEGVLFKTKVGEKTVLVKSFKLLSKSLKPLPLPKEDSEGNIYDEFNDPELRYRQR 164

Query: 130 FLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL  ++ + +  +KRT I NS+R  +    ++E  TPIL        AR FL      
Sbjct: 165 YVDLIVNSGVKETFIKRTLITNSIREFLNQREYLEVETPILQPIPGGATARPFLTHHNAL 224

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A + Y + L+  GFD  ++ A  FR+E       P EF  L++ +S+ + +
Sbjct: 225 NIPLY-LRIANELYLKRLIVGGFDGVYEFAKDFRNEGMDRTHNP-EFTILELYVSYKDYN 282

Query: 248 DILNTMENVLRGV---------FEEFSNGNTVSNNFLRICYDDAIRRY-GTDKPDLRNPI 297
            +++  E +L  V          +  +N       + RI    +I+++ G D   +   +
Sbjct: 283 WMMDMTERLLEKVSIDSTGNTKVKVGNNIIDFKAPYERISIFGSIKKFTGIDISKMDESM 342

Query: 298 IMHNVTEHFVHSEFRV 313
           +     +  V  +  +
Sbjct: 343 LRKTAKDLNVEIDNTM 358



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 80/239 (33%), Gaps = 46/239 (19%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI---AGDPLKFCSFAADARNHIAQELG 425
           ++  G + K   I  ++     L     D    I    G      S              
Sbjct: 321 ISIFGSIKKFTGIDISKMDESMLRKTAKDLNVEIDNTMGKGKIIDSIFG----------D 370

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
               N  +  +I D+P     +E   +   H                        +++L+
Sbjct: 371 KCEPNFIQPTFITDYP-----KEMSPLTKVHR----------------ENKDLTERFELI 409

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG-----GLYRAFQCGMPPHGGIA 540
            NG EIA+     +      + F       +  +   G        RA + GMPP  GI 
Sbjct: 410 VNGKEIANAYSELNDPIDQKERFEKQLELSKKGDKEAGEFIDYDFLRALEYGMPPTSGIG 469

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKIL 599
            GIDR+VML+    +++EV  FP        +      VS+ +  EL  +I+ N  ++L
Sbjct: 470 IGIDRLVMLMTDNSSIQEVLFFPQ-------MRPEKKKVSLTEKEELIFKILSNENQLL 521


>gi|148679578|gb|EDL11525.1| mCG141545, isoform CRA_b [Mus musculus]
          Length = 606

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/287 (21%), Positives = 118/287 (41%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 136 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFVHINNKLRRGDIIGV 193

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E        G++ +  Q+I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 194 --EGNPGKTKKGELSIIPQEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 250

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 251 QKFIVRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 309

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E +L 
Sbjct: 310 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMLS 368

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          +I Y          + D   P    ++ E 
Sbjct: 369 GMVKSITGSY-------KITYHPDGPEGQAYEVDFTPPFRRISMVEE 408



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 488 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 547

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 548 YGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMK 583


>gi|45201132|ref|NP_986702.1| AGR037Cp [Ashbya gossypii ATCC 10895]
 gi|44985915|gb|AAS54526.1| AGR037Cp [Ashbya gossypii ATCC 10895]
          Length = 589

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 106/262 (40%), Gaps = 13/262 (4%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIAKS----VRSEWVLC 72
             V ++G +H  R  G  + F  +  D   +  +    D    E  +     ++   ++ 
Sbjct: 122 ERVSIAGRIHAKRESGSKLRFYVLHADGVEVQVMSQLQDYHSEEAYEQDHGLLKRGDIVG 181

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           ++G V      T       G+I +   +I++L+      LP        +  R++ R+LD
Sbjct: 182 VEGYV----GRTQPKKGGEGEISVFVSRIQLLTPCL-HMLPADHFGFKDQETRYRKRYLD 236

Query: 133 LRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           L  +   +   + R++II  +R  +   +FIE  TP++   +        V    +    
Sbjct: 237 LIMNKDARGRFITRSKIITYIRKFLDNRDFIEVETPMMNVIAGGATAKPFVTHHNDLDMQ 296

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +  AP+ + + L+  G DR ++I   FR+E       P EF   +   ++ +  D+++
Sbjct: 297 MYMRIAPELFLKQLVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMD 355

Query: 252 TMENVLRGVFEEFSNGNTVSNN 273
             E +   + +E +    +  +
Sbjct: 356 MTELLFSEMVKEITGDYKIKFH 377



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 4/92 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                ++++     EI +     +        F      K+  ++           A + 
Sbjct: 483 PGLCERFEVFVATKEICNAYTELNDPFDQRARFEEQARQKDQGDDEAQLIDETFCNALEY 542

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP GG   G+DR+ M L  +  +REV LFP
Sbjct: 543 GLPPTGGWGCGVDRLAMFLTDSNTIREVLLFP 574


>gi|324503201|gb|ADY41394.1| Aspartyl-tRNA synthetase [Ascaris suum]
          Length = 509

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/317 (19%), Positives = 119/317 (37%), Gaps = 20/317 (6%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH----YGITQVVANPDSACFEIAKSVRS 67
           +  +  G  + + G +H  R  G   F+ +R        +  V         +   ++  
Sbjct: 61  VTAAVDGKEIWVRGRLHTSRSKGKTCFIVVRQRVHTVQAMLFVGEKVSKQMLKYVSNISK 120

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-----------PLPVFG 116
           E ++ + G+V     E ++       +EL   ++ ++S AE                  G
Sbjct: 121 ESIIDVRGVVRKVDEEIVSCTQK--DVELHVTQLHVVSTAEPRLPLQIEDASRAQDETSG 178

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                   R   R LDLR  T       +  +    R  +    F E  TP + +++ EG
Sbjct: 179 LSTVNLDTRLDNRVLDLRTPTSQAIFRIQDGVCELFRNTLKKRGFTEIHTPKIISAASEG 238

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +    S     ++ A  Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF  
Sbjct: 239 GANVFEVSYFKGSAYLA--QSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVG 296

Query: 237 LDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           LD+EM+F     +++ T+  +L  +F+            +   Y     ++      L+ 
Sbjct: 297 LDLEMAFKFHYHEVVETIGAMLIEIFKGLQANFQHEIETVCRQYPCEPFQFVEPALILKY 356

Query: 296 PIIMHNVTEHFVHSEFR 312
           P  +  + E+ V     
Sbjct: 357 PDAIKLLRENEVEIGDE 373



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 45/121 (37%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                S  +  YD+   G EI SG  R H   ++ Q    
Sbjct: 401 KYPLAVRPFYTMPD--------PNNSKYSNSYDMFMRGEEILSGAQRIHDPTLLTQRAKF 452

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I       +      AF+ G PPH G   G++R+ ML LG  NVR  SLFP       
Sbjct: 453 HNIDL----EKIRAYVDAFRFGCPPHAGGGIGLERVTMLFLGLGNVRLASLFPRDPKRIT 508

Query: 571 L 571
            
Sbjct: 509 P 509


>gi|260591211|ref|ZP_05856669.1| asparagine--tRNA ligase [Prevotella veroralis F0319]
 gi|260537076|gb|EEX19693.1| asparagine--tRNA ligase [Prevotella veroralis F0319]
          Length = 463

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 57/290 (19%), Positives = 113/290 (38%), Gaps = 26/290 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE 60
             RT     L  +D G  + + GWV   R    + F+ + D   I   QVV +P +   E
Sbjct: 1   MKRTKVVDALACTDFGKDINVKGWVRSHRSSKAVDFIALNDGSTIKNIQVVVDPTTIEEE 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             KS+ +   + + G ++        +       E+  ++IEI  +      P+  + + 
Sbjct: 61  KLKSITTGACISVIGTLVESQGAGQTS-------EIQCKEIEIYGLC-PSDYPMQKKGQS 112

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R KY  + LR +T       R  +  ++        +    TP++T S  EGA + 
Sbjct: 113 FEYMR-KYGHMRLRTNTFGAVFRIRHNMAIAIHKYFHDHGYYYFHTPLITGSDAEGAGNM 171

Query: 181 LVPSRVNQG------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDP 225
              + ++               F+          Q +  L A+     +   P FR E+ 
Sbjct: 172 FQVTTLDLDRIAKNGEVDYSADFFGKRTNLTVSGQLEGELGATSLGAIYTFGPTFRAENS 231

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + R   EF+ ++ E++F+++D++++  E+ ++               FL
Sbjct: 232 NTPRHLAEFWMVEPEVAFIDKDELMDLEEDFIKYCVRWALENCKDDLEFL 281



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L  +  EI  G +R    + +L    N G+ +      +       + G  PHGG   G 
Sbjct: 380 LFPHIGEIIGGSVREENYDKLLAEIDNRGMKR----EVYDWYLDTRKYGTCPHGGFGLGF 435

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+++ + G +N+R+V  F  +  
Sbjct: 436 ERLILFVTGMQNIRDVIPFARTPK 459


>gi|153811292|ref|ZP_01963960.1| hypothetical protein RUMOBE_01684 [Ruminococcus obeum ATCC 29174]
 gi|149832790|gb|EDM87874.1| hypothetical protein RUMOBE_01684 [Ruminococcus obeum ATCC 29174]
          Length = 463

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 112/353 (31%), Gaps = 51/353 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   V + GWV  VR      F+ + D       QVV + +   F     +     
Sbjct: 13  REEYLNREVTVGGWVRSVRGSKAFGFIVLHDGTFFETLQVVYHDNMPNFAEISKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++                E+ A ++++   +     P+  +R   E +R     
Sbjct: 73  IIVRGTLVPTPE-------AKQPFEIQADEVQVEGASAPDY-PLQKKRHTLEYLR-TMTH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++        F+   TP++T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSLCAYAIHKFFQERGFVYVHTPLITGSDCEGAGEMFQVTTLDMKN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 PPLNEDGTVDYSQDFFGKETNLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E +F + +D ++  E++L+ V            NF                   
Sbjct: 244 FWMIEPECAFADLNDNMDLAEDMLKYVIRYVLENAPEEMNFFNSFIDKGLLDRLNHVVDS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
               + Y +AI     +       +       TEH  +    +F K + V   
Sbjct: 304 EFGHVTYTEAIELLEKNNDKFDYKVFWGCDLQTEHERYLTEEIFKKPVFVTDY 356



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 49/139 (35%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P     +E K        F M Q               A    LV    EI 
Sbjct: 349 KPVFVTDYP-----KEIK-------AFYMKQNED--------GKTVAAMDCLVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + +      +G+  E  +          + G   H G   G +R VM L G
Sbjct: 389 GGSQREDDYDKLKARMDELGLKAEDYQ----FYMDLRKYGSTRHSGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N CDL
Sbjct: 445 MGNIRDVIPFPRTVNNCDL 463


>gi|116491117|ref|YP_810661.1| asparaginyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|122276701|sp|Q04EX6|SYN_OENOB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116091842|gb|ABJ56996.1| asparaginyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 434

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 72/307 (23%), Positives = 126/307 (41%), Gaps = 32/307 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73
           VG  V++  W+ + R  G I FL +RD  G  Q V    + D A F++A+ ++ E    +
Sbjct: 16  VGQTVKIGVWLRQKRGSGKIAFLQLRDGTGFMQGVVSVGDVDEATFKLAEHLKQESSFYV 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   S             E++   IEI+  +E+ P+     +E+     F  R L L
Sbjct: 76  TGEIHQDSRSEF-------GFEMAVSDIEIVGESEDYPITP---KEHGTDFLFDERHLYL 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  II ++      + F++  +PI+T S+PEG  +       ++ ++  
Sbjct: 126 RHQKPFATMKIRDEIIRAIYDFFHKDGFLKLDSPIITDSAPEGTTELFPVKYFDKDAY-- 183

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y     A  F + +   P FR E   + R   EF+ +D EM+++ Q+D L   
Sbjct: 184 LSQTGQLY-AEAGAMAFGKVYDFGPTFRAEKSSTRRHLTEFWMIDAEMAWMHQEDSLKVQ 242

Query: 254 ENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           E  +  + E   +                       + RI YDDA++    +   +   +
Sbjct: 243 ERFIAYLIERVVDNCQVELKMLGRDVEKLRAYTKLPYPRISYDDAVKLLQDNDFKIEWGV 302

Query: 298 IMHNVTE 304
              +  E
Sbjct: 303 DFGSPEE 309



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 49/143 (34%), Gaps = 7/143 (4%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL-LSIKAFQYDL 484
           ++  N F+  W +DF   E     K+ +        P+                    D+
Sbjct: 290 LLQDNDFKIEWGVDFGSPEETFLAKRFNSPFFIVNFPKAIKAFYMKRPPSRDDVVISADM 349

Query: 485 VCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           +      EI  G  R+   + + Q   +  +        +       + G  PH G   G
Sbjct: 350 LAPEGYGEIIGGSERDTDYDYLKQQIISQHLDLSE----YSWYLDLRKYGTVPHSGFGLG 405

Query: 543 IDRIVMLLLGAKNVREVSLFPMS 565
           ++R++  + G  ++RE   FP +
Sbjct: 406 LERLIRFIAGEDHIRETIPFPRT 428


>gi|262373049|ref|ZP_06066328.1| lysyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262313074|gb|EEY94159.1| lysyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 523

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/309 (21%), Positives = 122/309 (39%), Gaps = 35/309 (11%)

Query: 4   YRTHSCGDLGVS---------DVGSFV--RLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL            + G  V  +++G V   R      F+ I+D  G  Q+  
Sbjct: 62  KREHYAADLQEQFKDLDKAQIEGGEKVYVKVAGRVMLNRGS----FMVIQDMTGRIQLYV 117

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +      +I ++++S  +  I       +AE        G + +  +  E+L+ +   PL
Sbjct: 118 DRKGLAADILETIKSLDLGDI------IAAEGYIGRSGKGDLYVHLEGFELLTKSLR-PL 170

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA 171
           P           +++ R+LDL  +   +     R +++  +R  +  E F+E  TP++  
Sbjct: 171 PDKFHGLTDTEAKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHV 230

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 A+ F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   +   
Sbjct: 231 IPGGASAKPFVTHHNALDMELY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHN 289

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDD 281
           P EF  ++   ++ +  D++   EN+L  +  +      V            F +I   D
Sbjct: 290 P-EFTMIEFYQAYADYKDLMALTENMLEKLAIDILGTTDVPYGEEVYSFKGPFKKISMFD 348

Query: 282 AIRRYGTDK 290
           AI  +  D 
Sbjct: 349 AILEHNPDF 357



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 5/129 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E K +         P       + ND       +++    G E+A+G    +   
Sbjct: 394 FEETVETK-LRQPTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPI 452

Query: 503 VMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F      K+  ++           A + G+PP  G   GIDR+VML   A ++R+
Sbjct: 453 DQAERFQAQVAEKDAGDDEAMHYDADFIEALEYGLPPTAGEGIGIDRLVMLFANAPSIRD 512

Query: 559 VSLFPMSQN 567
           V LFP  + 
Sbjct: 513 VLLFPHMRR 521


>gi|295089868|emb|CBK75975.1| asparaginyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 463

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 123/376 (32%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +G  +R+ GWV  VR      F+ + D       QVV + +   F     +     
Sbjct: 13  REKFLGKEIRIGGWVRSVRDSKTFGFIVVSDGSYFETLQVVYHDNMENFNEISKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A ++ +   +         ++ +          
Sbjct: 73  ILVKGTLVATPE-------AKQPFEIQATEVLVEGASSPDYPLQ--KKRHSLEYLRTISH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-- 188
           L  R +T       R+ I  ++       +F+   TP++T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSLIAYAIHQYFQERDFVYVHTPLITGSDCEGAGEMFQVTTMDLAN 183

Query: 189 ------------GSFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+  P       Q      A  F   +   P FR E+  + R   E
Sbjct: 184 VPKASDGSVDFSQDFFGKPTNLTVSGQLNAETYAMAFRNVYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ EM+F + +D +   E++L+ V            NF                   
Sbjct: 244 FWMIEPEMAFADLNDNMALAESMLKYVIRYVLEHAPEEMNFFNQFIDKGLLDRLNHVLNS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
               + Y +A++       +    +       TEH  +   ++F + + V    +     
Sbjct: 304 EFGHVTYTEAVKLLEEHNDEFDYKVFWGCDLQTEHERYLTEQIFKRPVFVTDYPKEI--- 360

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  +MNE
Sbjct: 361 -------KAFYMKMNE 369



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 49/139 (35%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K        F M                 A    LV    EI 
Sbjct: 349 RPVFVTDYP-----KEIK-------AFYMKMNED--------GKTVAAMDCLVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    E +L     +G+ K      +G      + G   H G   G +R VM L G
Sbjct: 389 GGSQREDDYEKLLARMDELGLKK----EDYGFYLDLRKYGSVRHSGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N C+L
Sbjct: 445 MGNIRDVIPFPRTVNNCEL 463


>gi|148826050|ref|YP_001290803.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|166231666|sp|A5UCB9|SYN_HAEIE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148716210|gb|ABQ98420.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 467

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 74/429 (17%), Positives = 137/429 (31%), Gaps = 68/429 (15%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 17  IGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYESEILRLTTGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   +E          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGKVVESPSEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVSRVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RSENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           N V+++F
Sbjct: 250 MVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENFVNSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH        F   + V    +       
Sbjct: 310 AQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
                R   D     A     PG+  I            +G   +   +   +     + 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEI------------IGGSQREERLEVLDKRMEEMG 412

Query: 393 MQDGDSCFF 401
           +   D  ++
Sbjct: 413 LNPDDYWWY 421



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    EV+ +    +G++ +             +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEVLDKRMEEMGLNPDDYW----WYRDLRK 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 427 YGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPR 463


>gi|332092538|gb|EGI97611.1| asparaginyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 466

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 127/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +     Q E+ A K+E+    E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +DI    E +L+ VF+                            +  +F ++
Sbjct: 252 PEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+ +    +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNK----ENYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|320202327|gb|EFW76898.1| Asparaginyl-tRNA synthetase [Escherichia coli EC4100B]
          Length = 466

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 127/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +     Q E+ A K+E+    E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +DI    E +L+ VF+                            +  +F ++
Sbjct: 252 PEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+ +    +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|227111938|ref|ZP_03825594.1| asparaginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 466

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 131/388 (33%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVV--ANPDSACF-EIAKSVRSEWVLC 72
           V S V + GWV   R    GI F+ + D      +    N + + + +    + +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFIAVYDGSCFNPLQAVVNNNLSNYQDDVLRLTTGCSVE 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G V++   E  +        EL A  + ++   ++        + +      +   L 
Sbjct: 76  ITGNVVASPGEGQS-------FELQATNVNVVGWVDDPDTYPMAAKRHSIEYLREVAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ---- 188
            R + +      R  +  ++        +   STP++TAS  EGA +    S ++     
Sbjct: 129 PRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDLENLP 188

Query: 189 ----------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+   A      Q      A      +   P FR E+  + R   EF+
Sbjct: 189 RTEQGKVDFSEDFFGKEAFLTVSGQLNGETYACALSNVYTFGPTFRAENSNTSRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F   DD+    EN+L+ VF+   N                        VS++F
Sbjct: 249 MIEPEVAFASLDDVAALAENLLKYVFQAVLNERADDMAFFAERVDKEAITRLEKFVSSDF 308

Query: 275 LRICYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            ++ Y DA+           NP+    ++ +EH  +   + F   + V    +       
Sbjct: 309 AQVDYTDAVEILLNCGQQFENPVYWGVDLSSEHERYLAEQHFKAPVVVKNYPKDI----- 363

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 364 KAFYMRMNDDGKTVAAMDVLAPGIGEII 391



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R      +      +G++K      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLAQLDSRLEEMGLNK----EDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 426 YGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|82777546|ref|YP_403895.1| asparaginyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|331682441|ref|ZP_08383060.1| asparagine--tRNA ligase [Escherichia coli H299]
 gi|123742114|sp|Q32E51|SYN_SHIDS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|81241694|gb|ABB62404.1| asparagine tRNA synthetase [Shigella dysenteriae Sd197]
 gi|331080072|gb|EGI51251.1| asparagine--tRNA ligase [Escherichia coli H299]
          Length = 466

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 127/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +     Q E+ A K+E+    E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +DI    E +L+ VF+                            +  +F ++
Sbjct: 252 PEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDVRMLEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|295114740|emb|CBL35587.1| asparaginyl-tRNA synthetase [butyrate-producing bacterium SM4/1]
          Length = 463

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 123/376 (32%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +G  +R+ GWV  VR      F+ + D       QVV + +   F     +     
Sbjct: 13  REKFLGKEIRIGGWVRSVRDSKTFGFIVVSDGSYFETLQVVYHDNMENFSEISKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A ++ +   +         ++ +          
Sbjct: 73  ILVKGTLVATPE-------AKQPFEIQATEVLVEGASSPDYPLQ--KKRHSLEYLRTISH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-- 188
           L  R +T       R+ I  ++       +F+   TP++T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSLIAYAIHQYFQERDFVYVHTPLITGSDCEGAGEMFQVTTMDLAN 183

Query: 189 ------------GSFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+  P       Q      A  F   +   P FR E+  + R   E
Sbjct: 184 VPKASDGSVDFSQDFFGKPTNLTVSGQLNAETYAMAFRNVYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ EM+F + +D +   E++L+ V            NF                   
Sbjct: 244 FWMIEPEMAFADLNDNMALAESMLKYVIRYVLEHAPEEMNFFNQFIDKGLLDRLNHVLNS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
               + Y +A++       +    +       TEH  +   ++F + + V    +     
Sbjct: 304 EFGHVTYTEAVKLLEEHNDEFDYKVFWGCDLQTEHERYLTEQIFKRPVFVTDYPKEI--- 360

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  +MNE
Sbjct: 361 -------KAFYMKMNE 369



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 49/139 (35%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K        F M                 A    LV    EI 
Sbjct: 349 RPVFVTDYP-----KEIK-------AFYMKMNED--------GKTVAAMDCLVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    E +L     +G+ K      +G      + G   H G   G +R VM L G
Sbjct: 389 GGSQREDDYEKLLARMDELGLKK----EDYGFYLDLRKYGSVRHSGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N C+L
Sbjct: 445 MGNIRDVIPFPRTVNNCEL 463


>gi|295107912|emb|CBL21865.1| asparaginyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 463

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 114/353 (32%), Gaps = 51/353 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   V + GWV  VR      F+ + D       QVV + +   F     +     
Sbjct: 13  REEYLNKEVSVGGWVRSVRGSKAFGFIVLHDGTFFETLQVVYHDNMPNFAEISKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++                E+ A+++++   +     P+  +R   E +R     
Sbjct: 73  IIVKGTLVPTPE-------AKQPFEIQAEEVQVEGASAPDY-PLQKKRHTLEYLR-TMTH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++      + F+   TP++T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSLCAYAIHKFFQEKGFVYVHTPLITGSDCEGAGEMFQVTTLDMKN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 PPMNEDGTVDYSQDFFGKETNLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E +F + DD ++  E +L+ V            NF                   
Sbjct: 244 FWMIEPECAFADLDDNMDLAEEMLKYVIRYVLENAPEEMNFFNSFIDKGLLDRLNHVVNS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
               + Y +AI     +       +       TEH  +   ++F K + V   
Sbjct: 304 EFGHVTYTEAIELLEKNNDKFDYKVFWGCDLQTEHERYLTEQIFKKPVFVTDY 356



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 49/139 (35%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P     +E K        F M Q               A    LV    EI 
Sbjct: 349 KPVFVTDYP-----KEIK-------AFYMKQNED--------GKTVAAMDCLVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + +      +G+  E  +          + G   H G   G +R VM L G
Sbjct: 389 GGSQREDDYDKLKARMDEMGLKAEEYQ----FYMDLRKYGSTRHSGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N CDL
Sbjct: 445 MGNIRDVIPFPRTVNNCDL 463


>gi|322489782|emb|CBZ25042.1| putative lysyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 586

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 106/595 (17%), Positives = 177/595 (29%), Gaps = 120/595 (20%)

Query: 3   RYRTHSCGDLGVSD--VGSFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPD--- 55
           +YR      L   D  +   V ++G +   R  G  + F+ I+ D   +  + A  D   
Sbjct: 93  QYRRKYAPLLTEPDTSLDKTVTIAGRIINKRSSGSKLHFITIQGDMETVQVISALTDYID 152

Query: 56  -SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            S   EI   ++   ++ I G           +   + +  L A +I +LS      LP 
Sbjct: 153 QSKFAEIHSKLKRGDIIGIAG---------KPSLSKSSEFSLKATEITLLSTCY-HMLPD 202

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                     RF+ R+LD   +    K  ++R  II  +R      +F+E  TP+L   +
Sbjct: 203 DYFGLSSFEQRFRQRYLDFIVNRDNIKTFIQRANIIKYIRKFFDERDFVEVETPVLNQIA 262

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    V    +      L  AP+ Y + L+  G DR ++                  
Sbjct: 263 GGAAARPFVTHHNDLNQTMFLRIAPELYLKELVVGGMDRVYE------------------ 304

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
                                     V ++F N      +       +A   Y  D  D 
Sbjct: 305 --------------------------VGKQFRNEGIDLTHNPEFTSCEAYWAY-MDYHD- 336

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
                    TE  ++      +  L  +P        ++G        +    + R    
Sbjct: 337 -----WMTATEDLLYG----LAMELHGSPIVRYAPKDSEGKPLPEVTFNFNKPFKRLHII 387

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
           P L            +          +    + +         D        P       
Sbjct: 388 PEL---------EKRLKVSFDNVDFESDAGIQFLMDLCKKHKAD-----CPPPYTAPRLL 433

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                 IA+ L      C + C+I D P                        +     ND
Sbjct: 434 DAL---IAEFL---EPECHDPCFICDHP-------------------RVMSPLAKWHRND 468

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVM----LQAFSNVGISKEVVENRFGGLYRAF 529
                  +++L  N  E+A+     +   V     ++   N             G   A 
Sbjct: 469 PR--LTERFELFVNKKELANAYTELNNPIVQREEFVKQVRNRDKGDVESMEIDEGFVAAL 526

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQ 583
           +  +PP GG   GIDR+VM L    N++EV LFP M     + +   P T+   Q
Sbjct: 527 EHALPPTGGWGLGIDRLVMFLTSQSNIKEVLLFPAMKPEGKNAISYPPGTMLNGQ 581


>gi|218548446|ref|YP_002382237.1| asparaginyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|218355987|emb|CAQ88603.1| asparaginyl tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|323976683|gb|EGB71771.1| asparaginyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324113739|gb|EGC07714.1| asparaginyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 466

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 127/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +     Q E+ A K+E+    E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +DI    E +L+ VF+                            +  +F ++
Sbjct: 252 PEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVTILENCGKKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+ +    +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|148233149|ref|NP_001080336.1| aspartyl-tRNA synthetase [Xenopus laevis]
 gi|27503265|gb|AAH42227.1| Dars-prov protein [Xenopus laevis]
          Length = 530

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 24/302 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL V      V +   VH  R  G   FL +R        +  V         + A ++ 
Sbjct: 79  DLTVQIADETVWVRSRVHTSRAKGKQCFLVLRQQQFNVQALVAVGERASKQMVKFAANIT 138

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ ++G+V  R  +    +     +EL  ++I ++S AE        +   PE    
Sbjct: 139 KESIVDVEGVV--RKVDQKIESCTQQDVELHIERIYVISAAEPRLPLQLEDAVRPETEGE 196

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R +DLR  T       ++ I    R  +  + F+E  TP + +++
Sbjct: 197 EEGRATVNQDTRLDNRVIDLRTSTSQAVFGLQSGICQLFRDTLTNKGFVEIQTPKIISAA 256

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   E
Sbjct: 257 SEGGANVFTVSYFKTSAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTE 314

Query: 234 FYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           F  LD+EM+F     ++++ + + L  +F+              +C       +   +P 
Sbjct: 315 FVGLDIEMAFNYHYHEVVDEIADTLVQIFKGL--QERFQTEIQTVCKQFPCEPFKFLEPT 372

Query: 293 LR 294
           LR
Sbjct: 373 LR 374



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF            N+     +  YD+   G EI SG  R H  +++    ++
Sbjct: 422 KYPLAVRPFYTMPD------PNNPK--YSNSYDMFMRGEEILSGAQRVHDPQLLTDRATH 473

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP       
Sbjct: 474 HGIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRDPKRLT 529

Query: 571 L 571
            
Sbjct: 530 P 530


>gi|66357294|ref|XP_625825.1| lysyl-tRNA synthetase (NOB+tRNA synthetase) [Cryptosporidium parvum
           Iowa II]
 gi|46226895|gb|EAK87861.1| lysyl-tRNA synthetase (NOB+tRNA synthetase) [Cryptosporidium parvum
           Iowa II]
          Length = 559

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 100/559 (17%), Positives = 174/559 (31%), Gaps = 112/559 (20%)

Query: 16  DVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           D  + + LSG V  +R     +IF DI       Q++AN         +   S   +   
Sbjct: 92  DKDTTLSLSGRVTSIRSSSSKLIFYDIFCEEQKVQIIANIMEHDISTGEFSVSHSEIRRG 151

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            +V              G++ L ++ + +LS      LP        + +R++ R+LDL 
Sbjct: 152 DVVGFTG---FPGKSKRGELSLFSKSVVLLSPCY-HMLPTAISGLKDQEVRYRQRYLDLM 207

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFY 192
            +   + + K R+R I  +R       F+E  TP+L        AR F+      +   Y
Sbjct: 208 LNEESRKVFKLRSRAIKYIRNYFDRLGFLEVETPMLNMIYGGAAARPFITYHNELETQLY 267

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y + L+  G D+ ++I   FR+E                          ++ 
Sbjct: 268 -MRIAPELYLKQLIVGGLDKVYEIGKNFRNEG-------------------------IDL 301

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
             N                  F  + +  A   Y            + ++TE  +     
Sbjct: 302 THN----------------PEFTAMEFYMAYADY----------YDLMDLTEELISGLVL 335

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
                L +            G  G     D    W R        + F    ESG     
Sbjct: 336 EIHGSLKI-------PYHPDGPEGKCIEIDFTTPWKR--------FSFVEEIESGLGE-- 378

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
             + + L+        V +  +           P            H       +   C 
Sbjct: 379 -KLKRPLDSQENIDFMVEMCEKHE----IELPHPRTAAKLLDKLAGHF------VETKCT 427

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              +I+D                 +P TM        +  +       +++L   G E+ 
Sbjct: 428 NPSFIID-----------------HPQTMSPLAKWHREKPE----MTERFELFVLGKELC 466

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +     +      + F     +K   +            A + G+PP GG   GIDR++M
Sbjct: 467 NAYTELNEPLQQRKFFEQQADAKASGDVEACPIDETFCLALEHGLPPTGGWGLGIDRLIM 526

Query: 549 LLLGAKNVREVSLFPMSQN 567
            L    N++EV LFP  +N
Sbjct: 527 FLADKNNIKEVILFPAMRN 545


>gi|332830421|gb|EGK03049.1| asparaginyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 465

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 58/290 (20%), Positives = 106/290 (36%), Gaps = 27/290 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT           GS V + GWV  +R +  + F+ + D   I  +    D   F  +  
Sbjct: 6   RTKIVDLFKDPQFGSVVDVKGWVRTIRGNKYVNFIHLNDGSTIHNLQIVADVQKFGDDFF 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K V +   + + G ++    +  +A       E+ A  IE+   A+    P+  +    E
Sbjct: 66  KPVTTGACIHVTGTLVESQGKGQSA-------EIQADTIEVYGTADPETYPLQKKGHSLE 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +  +L  R +T       R  +  ++      + F    TPI+TAS  EGA     
Sbjct: 119 FLR-EIAYLRPRTNTFGAIFRIRHHMSYAIHKYFNDKGFFYFHTPIVTASDAEGAGSMFQ 177

Query: 183 PSRVN--------------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
            + ++                 F+          Q +  L A      +   P FR E+ 
Sbjct: 178 VTTLDFNNVPRAEGGQVDYTEDFFGRQTNLTVSGQLEGELGAMALGAIYTFGPTFRAENS 237

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + R   EF+ ++ E++F +  D ++  E+ L+ +             FL
Sbjct: 238 NTPRHLAEFWMIEPEVAFYDIHDNMDLAEDFLKYLIRYALEHCKDDIAFL 287



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L     EI  G  R    + ++     + ++ + +           + G  PH G   G 
Sbjct: 382 LFPKIGEIIGGSEREADYDKLVNRTKELNMNTDPIW----WYMETRKFGTAPHAGFGLGF 437

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+++ + G  N+R+V  FP + N
Sbjct: 438 ERLILFITGMANIRDVIPFPRTPN 461


>gi|325297359|ref|YP_004257276.1| Lysyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324316912|gb|ADY34803.1| Lysyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 576

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 105/256 (41%), Gaps = 10/256 (3%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F++++D  G  QV    D  C +  K + +     +  L  
Sbjct: 54  RKVSVAGRMMSRRVMGKASFIELQDSKGRIQVYITRDDICPDENKDLYNVAFKRLLDLGD 113

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFLD 132
               E        G+I + AQK+ +L+ +      V  +            +R++ R++D
Sbjct: 114 FIGIEGFVFRTQMGEISIHAQKLTVLAKSLRPLPIVKYKDGVAYDKFEDPELRYRQRYVD 173

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +  +    ++R  +I ++R  +    + E  TP L   +    A+ F+         
Sbjct: 174 LIVNDGVKDIFLQRATVIRTIRRVLDEAGYTEVETPTLQNIAGGASAKPFITHFNALDTD 233

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ + + + + ++
Sbjct: 234 MY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRNHNP-EFTCMELYVQYKDYNWMM 291

Query: 251 NTMENVLRGVFEEFSN 266
              E +L  V    + 
Sbjct: 292 AFTEKLLETVCIAVNG 307



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 81/256 (31%), Gaps = 49/256 (19%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W  +  +  L  +   ++        G +           I   +  + G D        
Sbjct: 289 WMMAFTEKLLETVCIAVNGKPEREIDGNIISFKAPYRRLPILEAIKEKTGYDLTGMDEAQ 348

Query: 406 PLKFCSFAADARNHIAQELG---IINCNCFEFC--------WIMDFPFYEWNEEEKKIDF 454
             + C         I   +G   +I+    EFC        +I D+P             
Sbjct: 349 IREVCQKLN---MEIDDTMGKGKLIDEIFGEFCEGTFIQPTFITDYP------------V 393

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             +P T        L           +++L+ NG E+A+     +      + F      
Sbjct: 394 EMSPLTKMHRSKPGL---------TERFELMVNGKELANAYSELNDPIDQEERFKEQMRL 444

Query: 515 KEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            +  ++          RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP  +    
Sbjct: 445 ADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGKTFIQEVLFFPQMR---- 500

Query: 571 LLMGSPSTVSVEQLRE 586
                P  V  +   E
Sbjct: 501 -----PEKVVPKDKTE 511


>gi|300123418|emb|CBK24691.2| unnamed protein product [Blastocystis hominis]
          Length = 574

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 53/327 (16%), Positives = 112/327 (34%), Gaps = 5/327 (1%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G V   R  G  +F       G    V   +      A++ +  +     G ++   
Sbjct: 117 SVAGRVILKRASGKKLFFYTLQGDGKQIQVMASEDKYEGGAEAFQEIYNKVRRGDIIGIR 176

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHK 140
                     G++ +    I+ILS    +    F         R++ R+LDL  +  +  
Sbjct: 177 G--FPGRSKRGELSIFPYSIQILSPCLHMLPKPFI-GLTNPETRYRMRYLDLIMNPSVRD 233

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
             + R+R+I  +R  +    FIE  TP++   +        +    +      +  AP+ 
Sbjct: 234 KFIIRSRVIRGIRSFLDERGFIEVETPMMNMHAGGATAKPFITHHNDLNLDLYMRIAPEL 293

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  G DR +++   FR+E       P EF   +  M++ +  DI+   E ++ G+
Sbjct: 294 YLKQLVIGGMDRVYELGRQFRNESIDMTHNP-EFTTCEFYMAYADVYDIMELTEQMVSGI 352

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
            ++ + G  +  +      D     +    P       +   +   +            +
Sbjct: 353 VKDITGGYKIQYHPQGKDADPVEIDFTPPWPRYSMIEELEKQSGLKIPMPLESQETYDFL 412

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEW 347
               +   I            D++ E 
Sbjct: 413 VATCKELKIECTPPLTTPRLLDKLVEH 439



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQ 530
                 +++L  N  E+A+     +   V    F      K   +     L      A +
Sbjct: 468 KPGLCERFELFVNYTELANAYTELNNPMVQRDRFMQQARDKSKGDEEAQCLDEEFCTALE 527

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG   G+DR+ M L  + N++EV LFP  +
Sbjct: 528 HGLPPTGGWGLGVDRLTMFLTDSNNIKEVLLFPAMK 563


>gi|296450337|ref|ZP_06892096.1| asparagine--tRNA ligase [Clostridium difficile NAP08]
 gi|296878749|ref|ZP_06902752.1| asparagine--tRNA ligase [Clostridium difficile NAP07]
 gi|296260830|gb|EFH07666.1| asparagine--tRNA ligase [Clostridium difficile NAP08]
 gi|296430256|gb|EFH16100.1| asparagine--tRNA ligase [Clostridium difficile NAP07]
          Length = 465

 Score =  182 bits (462), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 134/376 (35%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +G  V+++GW+   R      F+++ D       Q+V +     F+    +     
Sbjct: 15  KEQYIGKTVKVAGWIRTSRVSKNFGFIELNDGSFFKNMQIVFDEKVENFKEVGKLAISSS 74

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G       E ++       +E+ A+ I +   ++    P+  +R   E +R     
Sbjct: 75  ILVEG-------ELVSTEGAKQPVEIHAKSIVVEGESDS-SYPLQKKRHTLEYLR-TIAH 125

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +T       R+    ++       NF+   +PI+T S  EGA +    + ++   
Sbjct: 126 LRPRSNTFSAVFRVRSIAAYAIHKFFQERNFVYAHSPIITGSDCEGAGEMFRITTMDLND 185

Query: 191 --------------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+   A      Q    +MA  F   +   P FR E+  + R   E
Sbjct: 186 IPKTEDGKIDYTQDFFGKEANLTVSGQLNAEIMALSFRNVYTFGPTFRAENSYTGRHASE 245

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSN 272
           F+ ++ E+ F + +D +   E++++ V                              V++
Sbjct: 246 FWMIEPEIVFADLEDNMELAEDMIKYVISYVLENAPEEMEFFNSFIDKGLLERLNKIVNS 305

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
            F+RI Y  A+        D   P+       TEH  +   ++++  + V    +     
Sbjct: 306 EFVRITYTKAVELLIESGHDFEYPVEWGCDLQTEHERYITEQIYNCPVFVTDYPKDI--- 362

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  RMNE
Sbjct: 363 -------KAFYMRMNE 371



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 52/135 (38%), Gaps = 26/135 (19%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             ++ D+P        K I      F M           D  +++A   DL+  G  EI 
Sbjct: 352 PVFVTDYP--------KDIKA----FYMRMNE-------DGKTVRAM--DLLVPGVGEIV 390

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+L   + +G+     E  +       + G   H G   G +RI+M + G
Sbjct: 391 GGSQREEREDVLLDRINEMGLR----EEDYWWYLELRKFGTATHSGFGLGFERIIMYMTG 446

Query: 553 AKNVREVSLFPMSQN 567
             N+R+V  FP +  
Sbjct: 447 MSNIRDVIPFPRTPK 461


>gi|2961644|gb|AAC64260.1| lysyl-tRNA synthetase [Campylobacter jejuni]
          Length = 355

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/282 (21%), Positives = 124/282 (43%), Gaps = 17/282 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +  +R  G  IF +I D     Q+  + DS   E+   ++    L +  +V+   
Sbjct: 59  VVAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKN--LEVGDIVL--- 113

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
            +       TG+  L A ++++ + A  +PLP           R++ R++D+  +  + K
Sbjct: 114 VKGFPFVTKTGEFSLHASEVKLATKA-IVPLPEKYHGLTDIEQRYRKRYVDMIMNVEVRK 172

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           + + R+++++ +R     + F+E  TP++   +        V    + G    L  AP+ 
Sbjct: 173 DFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPEL 232

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF+  F+I  CFR+E       P EF  ++   ++    D+++  E +   +
Sbjct: 233 YLKRLIVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTEELFALL 291

Query: 261 FEEFS---------NGNTVSNNFLRICYDDAIRRYGTDKPDL 293
            ++ +              S  F RI Y DA+ +YG    DL
Sbjct: 292 LDKLNLGKTIEFDGKMINFSKPFERITYKDALCKYGGLDRDL 333


>gi|283780925|ref|YP_003371680.1| asparaginyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283439378|gb|ADB17820.1| asparaginyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 462

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 73/345 (21%), Positives = 129/345 (37%), Gaps = 51/345 (14%)

Query: 17  VGSFVRLSGWVHRVRP-HGGIIFLDIRDHY--GITQVVANPDSACFE-IAKSVRSEWVLC 72
           +G    + GWV   R   GG  F+++ D    G  QV+A+   A +E   K + +   + 
Sbjct: 14  IGKQAIIRGWVRTRRDSKGGFSFIEVNDGSSLGGLQVIADATLANYESEVKKLTTGSSVT 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G +     +           EL A  +E+   A+    P+  ++   E +R ++  L 
Sbjct: 74  IAGEIKPSGGKGQAT-------ELLASSVEVHGWADAEAYPLQKKQHSLEKLR-EWAHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R +T       R  I  S+      + F+  +TPI+TAS  EGA      + ++     
Sbjct: 126 PRTNTFGAVARLRNCISRSIHNFFQEDGFLYVNTPIITASDCEGAGAMFRVTTLDLEKLP 185

Query: 190 ----------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+   A      Q +  + A    + +   P FR E+  + R   EF+ 
Sbjct: 186 KVDGKVDNSQDFFQKPAYLTVSGQLEGEIFACALGKIYTFGPTFRAENSNTSRHLAEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVF--------EEFSNGNTV-------------SNNFL 275
           ++ E++F + DD +   E  L+ +F        E+    N               ++ F 
Sbjct: 246 VEPEVAFNDLDDNMTLAERFLKRMFSDALSQCGEDLKFFNEHVDTTTIATLEKLATSEFR 305

Query: 276 RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKIL 318
           RI Y +AI    T       P+       +EH  +   + F   +
Sbjct: 306 RISYTEAISILETCGEKFDYPVSWGCDLQSEHERYLTEKKFDGPV 350



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 42/120 (35%), Gaps = 12/120 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
               +  PF M           D  +++A    LV    EI  G  R    EV+    + 
Sbjct: 354 DYPRSLKPFYMRVND-------DGKTVRAMDV-LVPKVGEIIGGSQREERLEVIEGRMAE 405

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             ++               + G  PH G   G++R V  + G  N+R+V  FP +    +
Sbjct: 406 QHLNPADYW----WYLDLRRFGTVPHAGFGLGLERAVQFISGMANIRDVIPFPRTPGSAE 461


>gi|16128897|ref|NP_415450.1| asparaginyl tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|26246957|ref|NP_752997.1| asparaginyl-tRNA synthetase [Escherichia coli CFT073]
 gi|30062465|ref|NP_836636.1| asparaginyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56479774|ref|NP_706849.2| asparaginyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|74311488|ref|YP_309907.1| asparaginyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|82544672|ref|YP_408619.1| asparaginyl-tRNA synthetase [Shigella boydii Sb227]
 gi|89107780|ref|AP_001560.1| asparaginyl tRNA synthetase [Escherichia coli str. K-12 substr.
           W3110]
 gi|91210032|ref|YP_540018.1| asparaginyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110641127|ref|YP_668857.1| asparaginyl-tRNA synthetase [Escherichia coli 536]
 gi|110804939|ref|YP_688459.1| asparaginyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|157157150|ref|YP_001462150.1| asparaginyl-tRNA synthetase [Escherichia coli E24377A]
 gi|157160452|ref|YP_001457770.1| asparaginyl-tRNA synthetase [Escherichia coli HS]
 gi|162317582|ref|YP_852061.2| asparaginyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|170020668|ref|YP_001725622.1| asparaginyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|170080588|ref|YP_001729908.1| asparaginyl tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170682866|ref|YP_001744240.1| asparaginyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187733912|ref|YP_001880869.1| asparaginyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|188493504|ref|ZP_03000774.1| asparaginyl-tRNA synthetase [Escherichia coli 53638]
 gi|191166973|ref|ZP_03028796.1| asparagine tRNA synthetase [Escherichia coli B7A]
 gi|191172150|ref|ZP_03033694.1| asparagine tRNA synthetase [Escherichia coli F11]
 gi|193064676|ref|ZP_03045755.1| asparagine tRNA synthetase [Escherichia coli E22]
 gi|193071677|ref|ZP_03052579.1| asparagine tRNA synthetase [Escherichia coli E110019]
 gi|194428351|ref|ZP_03060892.1| asparagine tRNA synthetase [Escherichia coli B171]
 gi|194438714|ref|ZP_03070801.1| asparagine tRNA synthetase [Escherichia coli 101-1]
 gi|209918181|ref|YP_002292265.1| asparaginyl-tRNA synthetase [Escherichia coli SE11]
 gi|215486055|ref|YP_002328486.1| asparaginyl-tRNA synthetase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218553517|ref|YP_002386430.1| asparaginyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218557835|ref|YP_002390748.1| asparaginyl-tRNA synthetase [Escherichia coli S88]
 gi|218688773|ref|YP_002396985.1| asparaginyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218694405|ref|YP_002402072.1| asparaginyl-tRNA synthetase [Escherichia coli 55989]
 gi|218700551|ref|YP_002408180.1| asparaginyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218704358|ref|YP_002411877.1| asparaginyl-tRNA synthetase [Escherichia coli UMN026]
 gi|227884104|ref|ZP_04001909.1| asparagine--tRNA ligase [Escherichia coli 83972]
 gi|238900188|ref|YP_002925984.1| asparaginyl tRNA synthetase [Escherichia coli BW2952]
 gi|253774041|ref|YP_003036872.1| asparaginyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254161044|ref|YP_003044152.1| asparaginyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256018811|ref|ZP_05432676.1| asparaginyl-tRNA synthetase [Shigella sp. D9]
 gi|256023368|ref|ZP_05437233.1| asparaginyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|260843180|ref|YP_003220958.1| asparaginyl tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260854222|ref|YP_003228113.1| asparaginyl tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260867102|ref|YP_003233504.1| asparaginyl tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|293404233|ref|ZP_06648227.1| asparaginyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293409308|ref|ZP_06652884.1| asparaginyl-tRNA synthetase [Escherichia coli B354]
 gi|293414210|ref|ZP_06656859.1| asparaginyl-tRNA synthetase [Escherichia coli B185]
 gi|293433227|ref|ZP_06661655.1| asparaginyl-tRNA synthetase [Escherichia coli B088]
 gi|297519701|ref|ZP_06938087.1| asparaginyl-tRNA synthetase [Escherichia coli OP50]
 gi|298380016|ref|ZP_06989621.1| asparaginyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300824183|ref|ZP_07104302.1| asparaginyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300901637|ref|ZP_07119698.1| asparaginyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300902908|ref|ZP_07120853.1| asparaginyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300921031|ref|ZP_07137418.1| asparaginyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300925389|ref|ZP_07141275.1| asparaginyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300929628|ref|ZP_07145089.1| asparaginyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300937723|ref|ZP_07152525.1| asparaginyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300949703|ref|ZP_07163683.1| asparaginyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300955418|ref|ZP_07167794.1| asparaginyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300978402|ref|ZP_07174253.1| asparaginyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300983044|ref|ZP_07176420.1| asparaginyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|301022440|ref|ZP_07186321.1| asparaginyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301023054|ref|ZP_07186863.1| asparaginyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|301047806|ref|ZP_07194859.1| asparaginyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|301302455|ref|ZP_07208586.1| asparaginyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301326646|ref|ZP_07219976.1| asparaginyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|301643452|ref|ZP_07243500.1| asparaginyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|306812616|ref|ZP_07446809.1| asparaginyl-tRNA synthetase [Escherichia coli NC101]
 gi|307137560|ref|ZP_07496916.1| asparaginyl-tRNA synthetase [Escherichia coli H736]
 gi|307311683|ref|ZP_07591323.1| asparaginyl-tRNA synthetase [Escherichia coli W]
 gi|309795082|ref|ZP_07689502.1| asparaginyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|312969004|ref|ZP_07783211.1| asparaginyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312971060|ref|ZP_07785239.1| asparaginyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|331657002|ref|ZP_08357964.1| asparagine--tRNA ligase [Escherichia coli TA206]
 gi|331662346|ref|ZP_08363269.1| asparagine--tRNA ligase [Escherichia coli TA143]
 gi|331667311|ref|ZP_08368176.1| asparagine--tRNA ligase [Escherichia coli TA271]
 gi|67473033|sp|P0A8M0|SYN_ECOLI RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|67473034|sp|P0A8M1|SYN_ECOL6 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|67473035|sp|P0A8M2|SYN_SHIFL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123048314|sp|Q0T6B1|SYN_SHIF8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123049323|sp|Q0TJC3|SYN_ECOL5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123084494|sp|Q1RDS7|SYN_ECOUT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123732380|sp|Q3Z3J0|SYN_SHISS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123741970|sp|Q31YR7|SYN_SHIBS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166980085|sp|A7ZK21|SYN_ECO24 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166980086|sp|A7ZYN3|SYN_ECOHS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|189083271|sp|B1IW01|SYN_ECOLC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|26107357|gb|AAN79540.1|AE016758_144 Asparaginyl-tRNA synthetase [Escherichia coli CFT073]
 gi|41000|emb|CAA48274.1| Asparaginyl-tRNA synthetase [Escherichia coli K-12]
 gi|147935|gb|AAA24666.1| asparaginyl-tRNA synthetase (asnS) [Escherichia coli]
 gi|1651455|dbj|BAA35682.1| asparaginyl tRNA synthetase [Escherichia coli str. K12 substr.
           W3110]
 gi|1787161|gb|AAC74016.1| asparaginyl tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|30040711|gb|AAP16442.1| asparagine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56383325|gb|AAN42556.2| asparagine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|73854965|gb|AAZ87672.1| asparagine tRNA synthetase [Shigella sonnei Ss046]
 gi|81246083|gb|ABB66791.1| asparagine tRNA synthetase [Shigella boydii Sb227]
 gi|91071606|gb|ABE06487.1| asparagine tRNA synthetase [Escherichia coli UTI89]
 gi|110342719|gb|ABG68956.1| asparaginyl-tRNA synthetase [Escherichia coli 536]
 gi|110614487|gb|ABF03154.1| asparagine tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|157066132|gb|ABV05387.1| asparagine tRNA synthetase [Escherichia coli HS]
 gi|157079180|gb|ABV18888.1| asparaginyl-tRNA synthetase [Escherichia coli E24377A]
 gi|169755596|gb|ACA78295.1| asparaginyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|169888423|gb|ACB02130.1| asparaginyl tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170520584|gb|ACB18762.1| asparagine tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187430904|gb|ACD10178.1| asparaginyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|188488703|gb|EDU63806.1| asparaginyl-tRNA synthetase [Escherichia coli 53638]
 gi|190902967|gb|EDV62693.1| asparagine tRNA synthetase [Escherichia coli B7A]
 gi|190907677|gb|EDV67272.1| asparagine tRNA synthetase [Escherichia coli F11]
 gi|192927733|gb|EDV82348.1| asparagine tRNA synthetase [Escherichia coli E22]
 gi|192955001|gb|EDV85502.1| asparagine tRNA synthetase [Escherichia coli E110019]
 gi|194413566|gb|EDX29847.1| asparagine tRNA synthetase [Escherichia coli B171]
 gi|194422346|gb|EDX38346.1| asparagine tRNA synthetase [Escherichia coli 101-1]
 gi|209911440|dbj|BAG76514.1| asparaginyl-tRNA synthase [Escherichia coli SE11]
 gi|215264127|emb|CAS08471.1| asparaginyl tRNA synthetase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218351137|emb|CAU96841.1| asparaginyl tRNA synthetase [Escherichia coli 55989]
 gi|218360285|emb|CAQ97835.1| asparaginyl tRNA synthetase [Escherichia coli IAI1]
 gi|218364604|emb|CAR02290.1| asparaginyl tRNA synthetase [Escherichia coli S88]
 gi|218370537|emb|CAR18344.1| asparaginyl tRNA synthetase [Escherichia coli IAI39]
 gi|218426337|emb|CAR07162.1| asparaginyl tRNA synthetase [Escherichia coli ED1a]
 gi|218431455|emb|CAR12333.1| asparaginyl tRNA synthetase [Escherichia coli UMN026]
 gi|222032661|emb|CAP75400.1| Asparaginyl-tRNA synthetase [Escherichia coli LF82]
 gi|227838856|gb|EEJ49322.1| asparagine--tRNA ligase [Escherichia coli 83972]
 gi|238860020|gb|ACR62018.1| asparaginyl tRNA synthetase [Escherichia coli BW2952]
 gi|242376745|emb|CAQ31458.1| asparaginyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253325085|gb|ACT29687.1| asparaginyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253972945|gb|ACT38616.1| asparaginyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253977159|gb|ACT42829.1| asparaginyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|257752871|dbj|BAI24373.1| asparaginyl tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257758327|dbj|BAI29824.1| asparaginyl tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257763458|dbj|BAI34953.1| asparaginyl tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|260449924|gb|ACX40346.1| asparaginyl-tRNA synthetase [Escherichia coli DH1]
 gi|281600290|gb|ADA73274.1| Asparaginyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|284920781|emb|CBG33844.1| asparaginyl-tRNA synthetase [Escherichia coli 042]
 gi|291324046|gb|EFE63468.1| asparaginyl-tRNA synthetase [Escherichia coli B088]
 gi|291428819|gb|EFF01844.1| asparaginyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291434268|gb|EFF07241.1| asparaginyl-tRNA synthetase [Escherichia coli B185]
 gi|291469776|gb|EFF12260.1| asparaginyl-tRNA synthetase [Escherichia coli B354]
 gi|294489526|gb|ADE88282.1| asparaginyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|298279714|gb|EFI21222.1| asparaginyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|299881239|gb|EFI89450.1| asparaginyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300300338|gb|EFJ56723.1| asparaginyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300307008|gb|EFJ61528.1| asparaginyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300317707|gb|EFJ67491.1| asparaginyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300354968|gb|EFJ70838.1| asparaginyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300397260|gb|EFJ80798.1| asparaginyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300405050|gb|EFJ88588.1| asparaginyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300409690|gb|EFJ93228.1| asparaginyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300412022|gb|EFJ95332.1| asparaginyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300418518|gb|EFK01829.1| asparaginyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300450907|gb|EFK14527.1| asparaginyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300457284|gb|EFK20777.1| asparaginyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300462405|gb|EFK25898.1| asparaginyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300523359|gb|EFK44428.1| asparaginyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300842294|gb|EFK70054.1| asparaginyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300846691|gb|EFK74451.1| asparaginyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|301078166|gb|EFK92972.1| asparaginyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|305853379|gb|EFM53818.1| asparaginyl-tRNA synthetase [Escherichia coli NC101]
 gi|306908238|gb|EFN38737.1| asparaginyl-tRNA synthetase [Escherichia coli W]
 gi|307552769|gb|ADN45544.1| asparaginyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|307627642|gb|ADN71946.1| asparaginyl-tRNA synthetase [Escherichia coli UM146]
 gi|308121386|gb|EFO58648.1| asparaginyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|309701206|emb|CBJ00506.1| asparaginyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310336821|gb|EFQ01988.1| asparaginyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|312286406|gb|EFR14319.1| asparaginyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312945450|gb|ADR26277.1| asparaginyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|313650828|gb|EFS15229.1| asparaginyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|315060215|gb|ADT74542.1| asparaginyl tRNA synthetase [Escherichia coli W]
 gi|315135578|dbj|BAJ42737.1| asparaginyl-tRNA synthetase [Escherichia coli DH1]
 gi|315257974|gb|EFU37942.1| asparaginyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|315287563|gb|EFU46969.1| asparaginyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315291191|gb|EFU50551.1| asparaginyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315296233|gb|EFU55540.1| asparaginyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|315619125|gb|EFU99705.1| asparaginyl-tRNA synthetase [Escherichia coli 3431]
 gi|320177121|gb|EFW52136.1| Asparaginyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320183830|gb|EFW58663.1| Asparaginyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320196575|gb|EFW71198.1| Asparaginyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|323157179|gb|EFZ43302.1| asparaginyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323159559|gb|EFZ45539.1| asparaginyl-tRNA synthetase [Escherichia coli E128010]
 gi|323165404|gb|EFZ51191.1| asparaginyl-tRNA synthetase [Shigella sonnei 53G]
 gi|323174969|gb|EFZ60584.1| asparaginyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323175446|gb|EFZ61041.1| asparaginyl-tRNA synthetase [Escherichia coli 1180]
 gi|323185363|gb|EFZ70727.1| asparaginyl-tRNA synthetase [Escherichia coli 1357]
 gi|323190750|gb|EFZ76019.1| asparaginyl-tRNA synthetase [Escherichia coli RN587/1]
 gi|323379225|gb|ADX51493.1| asparaginyl-tRNA synthetase [Escherichia coli KO11]
 gi|323938036|gb|EGB34298.1| asparaginyl-tRNA synthetase [Escherichia coli E1520]
 gi|323942846|gb|EGB39011.1| asparaginyl-tRNA synthetase [Escherichia coli E482]
 gi|323947281|gb|EGB43289.1| asparaginyl-tRNA synthetase [Escherichia coli H120]
 gi|323953361|gb|EGB49227.1| asparaginyl-tRNA synthetase [Escherichia coli H252]
 gi|323958236|gb|EGB53945.1| asparaginyl-tRNA synthetase [Escherichia coli H263]
 gi|323962922|gb|EGB58496.1| asparaginyl-tRNA synthetase [Escherichia coli H489]
 gi|323967177|gb|EGB62601.1| asparaginyl-tRNA synthetase [Escherichia coli M863]
 gi|323973195|gb|EGB68387.1| asparaginyl-tRNA synthetase [Escherichia coli TA007]
 gi|324009869|gb|EGB79088.1| asparaginyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|324012919|gb|EGB82138.1| asparaginyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|324019059|gb|EGB88278.1| asparaginyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|324117205|gb|EGC11113.1| asparaginyl-tRNA synthetase [Escherichia coli E1167]
 gi|327253720|gb|EGE65349.1| asparaginyl-tRNA synthetase [Escherichia coli STEC_7v]
 gi|331055250|gb|EGI27259.1| asparagine--tRNA ligase [Escherichia coli TA206]
 gi|331060768|gb|EGI32732.1| asparagine--tRNA ligase [Escherichia coli TA143]
 gi|331065667|gb|EGI37560.1| asparagine--tRNA ligase [Escherichia coli TA271]
 gi|332342373|gb|AEE55707.1| asparaginyl-tRNA synthetase AsnS [Escherichia coli UMNK88]
 gi|332759018|gb|EGJ89328.1| asparaginyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|332760113|gb|EGJ90411.1| asparaginyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332762702|gb|EGJ92965.1| asparaginyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332767717|gb|EGJ97908.1| asparaginyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333001235|gb|EGK20803.1| asparaginyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333006157|gb|EGK25666.1| asparaginyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333008916|gb|EGK28376.1| asparaginyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333020053|gb|EGK39324.1| asparaginyl-tRNA synthetase [Shigella flexneri K-304]
 gi|333020226|gb|EGK39496.1| asparaginyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 466

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 127/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +     Q E+ A K+E+    E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +DI    E +L+ VF+                            +  +F ++
Sbjct: 252 PEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+ +    +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|149176428|ref|ZP_01855042.1| lysyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148844780|gb|EDL59129.1| lysyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 493

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 56/262 (21%), Positives = 119/262 (45%), Gaps = 17/262 (6%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLC 72
           + G  VR++G +   R  G + F DI+D  G  Q++    +   A +E+  ++    ++ 
Sbjct: 51  EDGEEVRIAGRIMLRRKAGKLRFYDIKDWTGKIQLLFSRGDLTEAQWELMGTLDLGDLIG 110

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           IDG +             TG+I +  +++ +L  +     P          +  + R LD
Sbjct: 111 IDGCLRRTE---------TGEISVFVKELTVLCKSLA-QPPEKHHSVKDVELLLRQRSLD 160

Query: 133 LR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L   + + + ++KR++II+S+R  +  + F E  TP+L A +    AR F+         
Sbjct: 161 LIYTEGVLEKMLKRSQIIDSVRQTLRNQKFAEVETPVLHAVAGGAAARPFITHHNTLDIE 220

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + + + LM  G +R ++I   FR+E   +   P EF  +++  ++ + + ++
Sbjct: 221 LY-MRIALELHLKRLMVGGIERVYEIGRVFRNEGIDATHNP-EFTMIEIYQAYGDYETMM 278

Query: 251 NTMENVLRGVFEEFSNGNTVSN 272
           +  E ++    +  S+   +  
Sbjct: 279 DLTEAIVTDAVKTISDTMELPW 300



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 24/133 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             +++D+P             +  P T  +    ++         A +++L   G E+A+
Sbjct: 370 PVFVIDYP------------ASICPLTKRKQDDPNI---------AERFELFVKGMELAN 408

Query: 494 GGIRNHMSEVMLQ--AFSNVGISKEVVENRFG-GLYRAFQCGMPPHGGIAAGIDRIVMLL 550
                +   +  +       G+S E    +      +A + GMPP GG+  GIDR+VMLL
Sbjct: 409 AYTELNDPLLQEELFQTQLSGLSDEDSMAKMDTDFIKALKVGMPPAGGLGIGIDRLVMLL 468

Query: 551 LGAKNVREVSLFP 563
             + ++R+V  FP
Sbjct: 469 TNSHSIRDVIYFP 481


>gi|311244570|ref|XP_003121503.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like [Sus
           scrofa]
          Length = 559

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 70/344 (20%), Positives = 127/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + + G+
Sbjct: 136 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLSDDLCQCYNGVVLSTESSVAVYGM 195

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 196 LKLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 251

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ I    R       + E + P L  +  EG           + ++  L Q
Sbjct: 252 NMSKILKARSVITRCFREHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFGEEAY--LTQ 309

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  +++LN +E++
Sbjct: 310 SSQLYLETCIP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFEELLNRLEDL 368

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V E                N       F R+ Y DAI           +    +   
Sbjct: 369 VCDVVERVMKSSAAGIVRELNPNFKPPKRPFRRMNYSDAIVWLKEHNIKKEDG-TFYEFG 427

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 428 EDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDSRLTE 471



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   +E +L  +    I        +       + G  PHGG   G+
Sbjct: 476 LMPNVGEIVGGSMRIWDNEELLAGYKREEIDPTP----YYWYTDQRKYGTCPHGGYGLGL 531

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R +  +L   ++R+V L+P     C  
Sbjct: 532 ERFLTWILDRYHIRDVCLYPRFVQRCKP 559


>gi|288936272|ref|YP_003440331.1| asparaginyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|290510672|ref|ZP_06550042.1| asparaginyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|288890981|gb|ADC59299.1| asparaginyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|289777388|gb|EFD85386.1| asparaginyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 466

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 120/385 (31%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    G  FL + D      V A  +++     + V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGFSFLAVYDGSCFDPVQAVINNSLPNYNQEV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A  +E+    E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASQGQGQSFEIQATSVEVTGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--------------LRICYDDAIR 284
            E++F   +D+    E +L+ VF+           F                I  D A  
Sbjct: 252 PEVAFANLNDVAGLAEAMLKYVFKAVLEERADDMQFFAERVDKDAIDRLQRFITADFAQV 311

Query: 285 RY-------GTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y               NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVTILENCGKQFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|227329500|ref|ZP_03833524.1| asparaginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 466

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 131/388 (33%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVV--ANPDSACF-EIAKSVRSEWVLC 72
           V S V + GWV   R    GI F+ + D      +    N + + + +    + +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFIAVYDGSCFNPLQAVVNNNLSNYQDDVLRLTTGCSVE 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G V++   E  +        EL A  + ++   ++        + +      +   L 
Sbjct: 76  ITGNVVASPGEGQS-------FELQATNVNVVGWVDDPDTYPMAAKRHSIEYLREVAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ---- 188
            R + +      R  +  ++        +   STP++TAS  EGA +    S ++     
Sbjct: 129 PRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDLENLP 188

Query: 189 ----------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+   A      Q      A      +   P FR E+  + R   EF+
Sbjct: 189 RTEQGKVDFSEDFFGKEAFLTVSGQLNGETYACALSNVYTFGPTFRAENSNTSRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F   DD+    EN+L+ VF+   N                        VS++F
Sbjct: 249 MIEPEVAFATLDDVAGLAENLLKYVFQAVLNERADDMAFFAERVDKEAITRLEKFVSSDF 308

Query: 275 LRICYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            ++ Y DA+           NP+    ++ +EH  +   + F   + V    +       
Sbjct: 309 AQVDYTDAVEILLNCGKQFENPVYWGVDLSSEHERYLAEQHFKAPVVVKNYPKDI----- 363

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 364 KAFYMRMNEDGKTVAAMDVLAPGIGEII 391



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 14/111 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M           D  ++ A   D++  G  EI  G  R      +      +G++K 
Sbjct: 365 AFYMRMNE-------DGKTVAAM--DVLAPGIGEIIGGSQREERLAQLDSRLEEMGLNK- 414

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 415 ---EDYWWYRDLRRYGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|225011199|ref|ZP_03701659.1| asparaginyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225004660|gb|EEG42622.1| asparaginyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 477

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 57/277 (20%), Positives = 112/277 (40%), Gaps = 30/277 (10%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           + + + GWV   R +    F+ + D   +   Q V + DS   EI K +     L I G 
Sbjct: 17  TTLTVQGWVRSFRSNR---FIALNDGSCMENLQCVIDFDSLPEEILKKITVGAALKITGT 73

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +     +         ++E+ A ++EIL V++    P+  ++   E +R +   L +R +
Sbjct: 74  LQESEGKG-------QRVEIQATEVEILGVSDPETYPIQPKKHSLEFLR-QNAHLRVRTN 125

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-------- 188
           T    +  R+ +  ++     +++F    TPI+T S  EGA +    S ++         
Sbjct: 126 TFSAIMRVRSTLSFAVHQYFRSQDFNYVHTPIVTGSDAEGAGEMFRVSTLDPKNPPLDSN 185

Query: 189 ------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+          Q +    A    + +   P FR E+  + R   EF+ ++ 
Sbjct: 186 GAIDYREDFFGKETNLTVSGQLEAETYAMALGKVYTFGPTFRAENSNTSRHLAEFWMIEP 245

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           EM+F + D  ++  E+ ++ V +           FL+
Sbjct: 246 EMAFYDLDANMDLAEDFIQNVIKYVLTHCQEDLAFLQ 282



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 14/118 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M           D  +++A   D++  G  EI  G  R    EV+ +  S
Sbjct: 369 DYPADIKAFYMR-------LNEDKKTVRAM--DILFPGIGEIVGGSQREERLEVLEERMS 419

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            +G+  + +           + G   H G   G +R+V+   G  N+R+V  FP +  
Sbjct: 420 AMGVDHKELW----WYKDLRKYGSAVHSGFGLGFERLVLFTTGMGNIRDVIPFPRTPQ 473


>gi|16764360|ref|NP_459975.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167552996|ref|ZP_02346746.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167993358|ref|ZP_02574452.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168243771|ref|ZP_02668703.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168264670|ref|ZP_02686643.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|194443471|ref|YP_002040200.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194450065|ref|YP_002044994.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197249609|ref|YP_002145920.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|200390273|ref|ZP_03216884.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|20139879|sp|P58696|SYN_SALTY RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|16419513|gb|AAL19934.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|194402134|gb|ACF62356.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194408369|gb|ACF68588.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197213312|gb|ACH50709.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|199602718|gb|EDZ01264.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205322466|gb|EDZ10305.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205328543|gb|EDZ15307.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205337229|gb|EDZ23993.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205346905|gb|EDZ33536.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|261246216|emb|CBG24020.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992741|gb|ACY87626.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157543|emb|CBW17033.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911986|dbj|BAJ35960.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|323129266|gb|ADX16696.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332987891|gb|AEF06874.1| DNA-binding transcriptional regulator AsnC [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 466

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 125/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V   V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDQEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEEV----LHLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A K+E+    E+        + +      +   L  R 
Sbjct: 72  CSVVVTGKVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++  +     
Sbjct: 132 NLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 196 QA-----------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           Q                    Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + +D     E +L+ VF                             VS +F ++
Sbjct: 252 PEVAFADLEDNARLAEAMLKYVFNAVLEERADDMKFFAERVDKDAIARLERFVSTDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVAILERCGKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|324503664|gb|ADY41587.1| Aspartyl-tRNA synthetase [Ascaris suum]
          Length = 534

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/317 (19%), Positives = 119/317 (37%), Gaps = 20/317 (6%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH----YGITQVVANPDSACFEIAKSVRS 67
           +  +  G  + + G +H  R  G   F+ +R        +  V         +   ++  
Sbjct: 86  VTAAVDGKEIWVRGRLHTSRSKGKTCFIVVRQRVHTVQAMLFVGEKVSKQMLKYVSNISK 145

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL-----------PLPVFG 116
           E ++ + G+V     E ++       +EL   ++ ++S AE                  G
Sbjct: 146 ESIIDVRGVVRKVDEEIVSCTQK--DVELHVTQLHVVSTAEPRLPLQIEDASRAQDETSG 203

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                   R   R LDLR  T       +  +    R  +    F E  TP + +++ EG
Sbjct: 204 LSTVNLDTRLDNRVLDLRTPTSQAIFRIQDGVCELFRNTLKKRGFTEIHTPKIISAASEG 263

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +    S     ++ A  Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF  
Sbjct: 264 GANVFEVSYFKGSAYLA--QSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVG 321

Query: 237 LDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           LD+EM+F     +++ T+  +L  +F+            +   Y     ++      L+ 
Sbjct: 322 LDLEMAFKFHYHEVVETIGAMLIEIFKGLQANFQHEIETVCRQYPCEPFQFVEPALILKY 381

Query: 296 PIIMHNVTEHFVHSEFR 312
           P  +  + E+ V     
Sbjct: 382 PDAIKLLRENEVEIGDE 398



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 45/121 (37%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                S  +  YD+   G EI SG  R H   ++ Q    
Sbjct: 426 KYPLAVRPFYTMPD--------PNNSKYSNSYDMFMRGEEILSGAQRIHDPTLLTQRAKF 477

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I       +      AF+ G PPH G   G++R+ ML LG  NVR  SLFP       
Sbjct: 478 HNIDL----EKIRAYVDAFRFGCPPHAGGGIGLERVTMLFLGLGNVRLASLFPRDPKRIT 533

Query: 571 L 571
            
Sbjct: 534 P 534


>gi|161761265|ref|YP_249074.2| asparaginyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 467

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 74/429 (17%), Positives = 137/429 (31%), Gaps = 68/429 (15%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 17  IGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYESEILRLTTGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   +E          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGKVVESPSEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RSENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           N V+++F
Sbjct: 250 MVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENFVNSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH        F   + V    +       
Sbjct: 310 AQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
                R   D     A     PG+  I            +G   +   +   +     + 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEI------------IGGSQREERLEVLDKRMEEMG 412

Query: 393 MQDGDSCFF 401
           +   D  ++
Sbjct: 413 LNPDDYWWY 421



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    EV+ +    +G++ +             +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEVLDKRMEEMGLNPDDYW----WYRDLRK 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 427 YGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPR 463


>gi|332297531|ref|YP_004439453.1| Asparaginyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180634|gb|AEE16322.1| Asparaginyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 484

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 67/401 (16%), Positives = 128/401 (31%), Gaps = 53/401 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA----KSVRS 67
           L     G  + + GWV   R    ++F+ + D      V    D      A     S+ +
Sbjct: 10  LVSQPDGRTLTVCGWVRTKRESKNLVFIQVNDGSCFASVQLTLDRENPADASVNLNSIEN 69

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           E      G  +    + + +      +E++   + +L  A     P+  +    E +R +
Sbjct: 70  ELKKITTGASIQAEGKLVPSPASGQAVEVALVSLTVLGEAPADAYPLQKKNHSLEFLR-E 128

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
              L  R +T       R+++  ++        F    TPI+TAS  EGA +    + ++
Sbjct: 129 NAHLRARTNTFGAVARMRSQMAYAIHTFFQDRGFQYVHTPIITASDAEGAGEMFQVTTLS 188

Query: 188 QG---------------------------SFYALPQA---PQQYKQLLMASGFDRYFQIA 217
                                         F+    +     Q +    A+   R +   
Sbjct: 189 MEKIAENGVSAGAKGMSAEKAAALVDYGKDFFGKKASLTVSGQLEAETYATALSRVYTFG 248

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-- 275
           P FR E+  + R   EF+ ++ E++F + +D ++  E  ++ +        T    F   
Sbjct: 249 PTFRAENSNTTRHLAEFWMIEPEIAFFDLNDNMDIAEEFVKYLLNWALTKCTADMQFFND 308

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS-----------KILSVNPGY 324
           RI              D         V E   +++   F            +       Y
Sbjct: 309 RIQKGIIDTLAHVVNSDFVRITYTEAVAELEKNADKFEFKPYWGCDLQSEHEKFLTEVVY 368

Query: 325 EVWAIPAKGGGGNRAFCDRMNEWARSQGQ-----PGLAYIF 360
           +   I        +AF  ++NE  ++        PGL  I 
Sbjct: 369 KRPVIVTGYPKEIKAFYMKLNEDGKTVRAMDVLVPGLGEII 409



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 5/101 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              D  +++A    LV    EI  G  R    +V+L     +G++ +     +       
Sbjct: 388 LNEDGKTVRAMDV-LVPGLGEIIGGSEREADYDVLLDRIRKLGLNPDD----YRWYLDLR 442

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           + G  PH G   G +R+++ + G  N+R+V  +P +    D
Sbjct: 443 RFGSVPHSGFGLGFERLLLYVTGMGNIRDVIPYPRAPKLAD 483


>gi|315634321|ref|ZP_07889608.1| asparagine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476911|gb|EFU67656.1| asparagine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 467

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/388 (17%), Positives = 122/388 (31%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 17  IGEKVTVRGWVRTRRDSKAGLSFLAVYDGSCFAPIQAIVNNDIVNYESEVLRLTAGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   AE          +EL A+ +E+    E+        + +      +   L 
Sbjct: 77  VTGTVVESPAEGQA-------VELQAESVEVTGWVEDPETYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RTDKGAVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-------------------- 275
            ++ E++F    D     E++L+ VF            F                     
Sbjct: 250 MIEPEVAFATLADNAKLAEDMLKYVFRAVLAERRDDLEFFAKHVDGDVINRLERFIHSDF 309

Query: 276 -RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            ++ Y DAI            P+   +   +EH  +     F   + V    +       
Sbjct: 310 AQVDYTDAIEILLKSSKTFEFPVSWGIDLSSEHERYLAEEYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+ +    +G++       +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDKRMEEMGLNP----EDYWWYRDLRR 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 427 YGTVPHSGFGLGFERLIVYVTGLQNIRDVIPFPRAPR 463


>gi|307131486|ref|YP_003883502.1| asparaginyl-tRNa synthetase [Dickeya dadantii 3937]
 gi|306529015|gb|ADM98945.1| Asparaginyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 466

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 128/385 (33%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI F+ + D      + A  ++        V    +    G
Sbjct: 16  VDSDVTVRGWVRTRRDSKAGISFIAVYDGSCFDSLQAVVNNNLANYQSDV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL A +++++   E+        + +      +   L  R 
Sbjct: 72  CSVEVTGKVVESPGEGQSFELQATELKVVGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++        F   STPI+TAS  EGA +    S ++        
Sbjct: 132 NLVGAVARVRHTLAQAIHRYFHQSGFYWVSTPIITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 189 -------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 QGKVDFSEDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMIE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   DD+    E++L+ VF+                            VS++F ++
Sbjct: 252 PEVAFATLDDVAALAESLLKFVFKAVLEERADDMKFFAERVDKEAISRLERFVSSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI           NP+   +   +EH  +   + F   + V    +          
Sbjct: 312 DYTDAITILENCGQTFENPVSWGIDLSSEHERYLAEKHFQAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRMNSDGKTVAAMDVLAPGIGEII 391



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 42/122 (34%), Gaps = 5/122 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    E +   
Sbjct: 347 EKHFQAPVVVKNYPKDIKAFYMRMNSDGKTVAAMDVLAPGIGEIIGGSQREERLEQLDIR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              +G+SK      +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 407 LEEMGLSK----EDYWWYRDLRRYGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462

Query: 568 FC 569
             
Sbjct: 463 SA 464


>gi|194434376|ref|ZP_03066639.1| asparagine tRNA synthetase [Shigella dysenteriae 1012]
 gi|194417360|gb|EDX33466.1| asparagine tRNA synthetase [Shigella dysenteriae 1012]
 gi|332095876|gb|EGJ00883.1| asparaginyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 466

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 127/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +     Q E+ A K+E+    E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +DI    E +L+ VF+                            +  +F ++
Sbjct: 252 PEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+ +    +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|227529905|ref|ZP_03959954.1| asparagine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227350159|gb|EEJ40450.1| asparagine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 432

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 72/351 (20%), Positives = 132/351 (37%), Gaps = 33/351 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAK-SVRSEW 69
              VG  V++  W+   R  G I FL +RD  G  Q +    + D A F+ AK  +  E 
Sbjct: 10  PQHVGETVKIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNDIDEAKFDSAKHDLHQET 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              + G +                 E+  +  EI+S +E+ P    G +E+       +R
Sbjct: 70  SFWVTGEIAEDKRSKF-------GYEIHIKDFEIVSESEDYP---IGNKEHGIEFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R+R+  +         F +   PILT+S+PEG  +       +  
Sbjct: 120 HLWLRSRKPWALMRIRSRVKLATMEFFDKHGFTQFDAPILTSSAPEGTTELFDVKYFDTD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A    + + + P FR E  ++ R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMALGKIYTMGPTFRAEKSKTRRHMTEFWMIEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPDL 293
           L   E  +  + ++  +                       + RI Y  AI        D 
Sbjct: 237 LKIQEQYVAYLVQDLIDHCTQELEMVGRSVESLKPFTELPYPRITYKKAIEMLQEGGFDS 296

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           +      +  E ++  +F     I++     + + +P       +  C  +
Sbjct: 297 KYGDDFGSPEETYLADQFNKPVFIMNYPRAIKAFYMPTDPEDDRQVICADL 347



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 22/136 (16%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +IM++P        + I   + P          +   DLL+ + +         EI 
Sbjct: 316 KPVFIMNYP--------RAIKAFYMPT--DPEDDRQVICADLLAPEGYG--------EII 357

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R++  E +       G+SK      +G      + G  PH G   G++R +  +  
Sbjct: 358 GGSERSYDYEYITNKLEENGLSK----EDYGWYDDLRKFGSVPHSGFGMGLERFLSWITL 413

Query: 553 AKNVREVSLFPMSQNF 568
            +++RE   FP   N 
Sbjct: 414 QEHIRENIPFPRMINR 429


>gi|126305059|ref|XP_001378881.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 651

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 20/260 (7%)

Query: 22  RLSGWVHRVRPHGG-IIFLDIRDHYGITQVVA-----NPDSACFEIAKSVRSEWVLCIDG 75
           R++G VH  R  G  ++F DIR      QV A       +   F I   +R   ++ + G
Sbjct: 181 RVAGRVHAKRSAGKKLVFYDIRGEGSKLQVKATSKNYKSEEEFFHINNKLRRGDIIGVQG 240

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
                           G++ +   +I +LS      LP        +  R++ R+LDL  
Sbjct: 241 ---------NPGRTKRGELSIIPHEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLIL 290

Query: 136 DTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYA 193
           +   +   + R++II  +R  +    F+E  TP++        A+ F+        + Y 
Sbjct: 291 NDFVRQKFITRSKIITYIRSFLDELGFLEVETPMMNFIPGGAVAKPFITYHNELDMNLY- 349

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   
Sbjct: 350 MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEIT 408

Query: 254 ENVLRGVFEEFSNGNTVSNN 273
           E ++ G+ +  +    VS +
Sbjct: 409 EKMISGMVKNITGSYKVSYH 428



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
               + +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 533 RDGLSERFELFVMKKEICNAYTELNDPVRQQQFFEEQAKAKAAGDDEAMIMDDSFCTALE 592

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ MLL  + N++EV LFP  +
Sbjct: 593 YGLPPTAGWGMGIDRLTMLLTDSSNIKEVLLFPAMK 628


>gi|306820427|ref|ZP_07454063.1| asparagine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551502|gb|EFM39457.1| asparagine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 464

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/347 (17%), Positives = 122/347 (35%), Gaps = 46/347 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  V + GWV  +R      F+++ D      +    +    E  K V    +      
Sbjct: 17  LGKEVTVQGWVKTIRDSKKFAFIELNDGTFFNNLQIVLEVENLENFKEVVKYPIY----T 72

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            +    + +         E+ A +I +L+ ++    P+  +R   E +R     L  R +
Sbjct: 73  AIKVRGDLVKTEGAKQDFEVKANEITLLATSDSDY-PLQKKRHTFEYLR-TIAHLRPRAN 130

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                   R+    ++      +NF+   TPI+TAS  EGA +    + ++  +     +
Sbjct: 131 AFSAVFRVRSIAAYAVHKFFQEKNFVYAHTPIITASDAEGAGEMFQVTTLDMNNLPKNQE 190

Query: 197 APQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               +K+                  + A  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 191 GKIDFKEDFFDKETHLTVSGQLEAEIFAMAFKNVYTFGPTFRAENSNTARHAAEFWMIEP 250

Query: 240 EMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRIC 278
           E++F    + ++  E +++ +            EF N            N + N F RI 
Sbjct: 251 EIAFATLQENMDVAEEMVKFIIRYCLENAKEEMEFFNSFVDKGLFERLNNILENKFERIT 310

Query: 279 YDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
           Y  A+             +   +   TEH  +   ++F K + V   
Sbjct: 311 YTKAVELLQNSGQKFEYKVEWGIDLQTEHERYLTEQIFKKPVFVTDY 357



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 26/134 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P                 F M        + ND     A   DL+  G  EI
Sbjct: 350 KPVFVTDYP------------EKIKAFYM--------RSNDDGKTVA-AMDLLVPGVGEI 388

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    +++ +   +  + +      +       + G   H G   G +R++M L 
Sbjct: 389 IGGSQREERLDILEKKIKDNNLDR----ETYWWYLELRKYGGVKHSGYGLGFERMIMYLT 444

Query: 552 GAKNVREVSLFPMS 565
           G +N+R+V  FP +
Sbjct: 445 GMQNIRDVIAFPRT 458


>gi|77917544|ref|NP_001030093.1| probable asparaginyl-tRNA synthetase, mitochondrial [Rattus
           norvegicus]
 gi|74356254|gb|AAI04692.1| Asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) [Rattus
           norvegicus]
          Length = 391

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/270 (23%), Positives = 116/270 (42%), Gaps = 19/270 (7%)

Query: 12  LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           LGV D  G  V + GW+  VR    ++FL + D   +  +    DS+    ++ +     
Sbjct: 34  LGVQDASGECVTVQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSSF--DSRELAFGSS 91

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++   ++  N       +EL A+KIE++   E    P+  +  +P     +Y  
Sbjct: 92  VQVQGQLVKSQSKRQN-------VELKAEKIEVVGTCEAKAFPIKYKERHPLEYLRQYPH 144

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-----R 185
           L  R + L   +  R+    ++        F+   TP+LT++  EGA +          +
Sbjct: 145 LRCRTNALGSILRVRSEATAAIHSYFKDNGFMHIHTPVLTSNDCEGAGELFQVEPSSKIK 204

Query: 186 VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           V + +F+   A      Q    +M+  F + F   P FR E+ +S R   EFY ++ E+S
Sbjct: 205 VPEENFFDVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEVS 264

Query: 243 FVEQ-DDILNTMENVLRGVFEEFSNGNTVS 271
           FVE   D++  ME + +   E   +     
Sbjct: 265 FVESLQDLMQVMEGLFKATTEMVLSHCPED 294


>gi|309787803|ref|ZP_07682413.1| asparaginyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308924202|gb|EFP69699.1| asparaginyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 463

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 127/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 13  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 68

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +     Q E+ A K+E+    E+        + +      +   L  R 
Sbjct: 69  CSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 128

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 129 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 188

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 189 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 248

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +DI    E +L+ VF+                            +  +F ++
Sbjct: 249 PEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQV 308

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 309 DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 363

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 364 YMRLNEDGKTVAAMDVLAPGIGEII 388



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      +G++K      +      
Sbjct: 367 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDVRMLEMGLNK----EDYWWYRDL 420

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 421 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 459


>gi|126321623|ref|XP_001366376.1| PREDICTED: similar to asparaginyl-tRNA synthetase [Monodelphis
           domestica]
          Length = 548

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/348 (19%), Positives = 126/348 (36%), Gaps = 23/348 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            +  G  V++ GWVHR+R  G  ++FL +RD  G  Q V + +         + +E  + 
Sbjct: 121 EAHRGQRVKVFGWVHRLRRQGKNLMFLILRDGTGYLQCVLSDELCQCYNGVVLSTESSVA 180

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G +              G  ELS    E++ +A           E    ++   R + 
Sbjct: 181 VYGTLNLTPEG----KQAPGGHELSCDYWELIGLAPAGGADNLINEESDVDVQLNNRHMM 236

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R + + K +  R+ +    R       + E + P L  +  EG           + +F 
Sbjct: 237 IRGENMSKILKVRSVVTGCFRDHFFDRGYYEITPPTLVQTQVEGGATLFKLDYFGEDAF- 295

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  DD+LN 
Sbjct: 296 -LTQSSQLYLETCIP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFDDLLNR 353

Query: 253 MENVLRGVFEEFSN-------------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           +E+++  V +                        F R+ Y DAI           +    
Sbjct: 354 LEDLVCDVVDRILKSPAASLLYDLNPTFTPPKRPFKRMNYSDAIVWLKEHDVKKEDG-TY 412

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           +   E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 413 YEFGEDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDSRLTE 460



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +S     +         L+ N  EI  G +R    E +L+ +  
Sbjct: 439 RFPVEIKSFYMQRCPEDSRLTESVDV-------LMPNVGEIVGGSMRIWDGEELLKGYKR 491

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 492 EEIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCK 547

Query: 571 L 571
            
Sbjct: 548 P 548


>gi|269138594|ref|YP_003295294.1| asparaginyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267984254|gb|ACY84083.1| asparaginyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304558602|gb|ADM41266.1| Asparaginyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 466

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/426 (17%), Positives = 141/426 (33%), Gaps = 62/426 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V + V + GWV   R    GI FL + D      + A  +++       V    +    G
Sbjct: 16  VDTEVTVRGWVRTRRDSKAGISFLAVYDGSCFNPLQAVVNNSLPNYEDEV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  S   + +       EL A  I+++   ++        + +      +   L  R 
Sbjct: 72  CSVEVSGRVVASPGEGQSFELQATAIKVVGWVDDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++        +   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQAIHRYFNENGYFWVSTPLITASDTEGAGEMFRVSTLDMENLPRTD 191

Query: 189 -------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 AGKVDYSEDFFGREAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + +DI    E +L+ VF                             VS++F ++
Sbjct: 252 PEVAFADLNDIAGVAEGMLKYVFNAVLEERADDMAFFAQRVDKDAIDRLQRFVSSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI    T      NP+    ++ +EH  +   + F   + V    +          
Sbjct: 312 DYTDAITILETCGKQFENPVFWGVDLSSEHERYLAEQHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             R   D     A     PG+  I   +  S     +  + K L+          + ++ 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEI---IGGSQREERLDMLDKRLDE---------MGLKK 414

Query: 396 GDSCFF 401
            D  ++
Sbjct: 415 EDYWWY 420



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +++ +    +G+ K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDMLDKRLDEMGLKK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+V  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHAGFGLGFERLVAYVTGVQNVRDVIPFPRTPR 462


>gi|325283337|ref|YP_004255878.1| Lysyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324315146|gb|ADY26261.1| Lysyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 524

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 108/248 (43%), Gaps = 15/248 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAKSVRSEWVLCIDGLVMSR 80
            L+G +  +R  G   F +++D +G  QV  +  D   F   K +    ++ + G     
Sbjct: 78  SLAGRITLLRHMGKAAFAELQDEWGSLQVFFSKSDLESFAATKKIDLGDIIGVKGY---- 133

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                     TGQ+ L   + + L  +   PLP        E +R + R+LDL  +   +
Sbjct: 134 -----PFVTKTGQLTLHVTEWQPLVKSL-HPLPTKFGGLQDEELRARRRYLDLIVNPERR 187

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAP 198
              + R++ I  +R  + ++ F+E   P L T      A  F    +     F +L  + 
Sbjct: 188 EAFRTRSQAIRYIRNFLDSQGFMEVEGPTLQTVPGGTEATPFQTHHKALSHDF-SLRISL 246

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+R ++I   +R+E       P EF  L+   ++ + +D++  +E +L 
Sbjct: 247 ELYLKRLLVGGFERVYEIGRNYRNEGIDRTHNP-EFTMLEAYFAYGDYNDMMELVERMLN 305

Query: 259 GVFEEFSN 266
           G+ +E + 
Sbjct: 306 GLVKEVTG 313



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 4/93 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQ 530
            +  + + DL   GFE+A      + +      F      +    +    +      A +
Sbjct: 411 RAGLSERADLFVGGFELAPIYSELNDALDQRARFEAQTARREAGDDEAHQQDEDFLLALE 470

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP  G+  G+DR+ MLL  + ++R+V LFP
Sbjct: 471 YGMPPTAGMGMGMDRLAMLLTDSDSIRDVLLFP 503


>gi|62179527|ref|YP_215944.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224582810|ref|YP_002636608.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|75484225|sp|Q57QZ8|SYN_SALCH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|62127160|gb|AAX64863.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224467337|gb|ACN45167.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322713995|gb|EFZ05566.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 466

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 125/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V   V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDQEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEEV----LHLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A K+E+    E+        + +      +   L  R 
Sbjct: 72  CSVVVTGKVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++  +     
Sbjct: 132 NLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 196 QA-----------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           Q                    Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + +D     E +L+ VF                             VS +F ++
Sbjct: 252 PEVAFADLEDNARLAEAMLKYVFNAVLEERADDMKFFAERVDKDAIARLERFVSTDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y +A+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTEAVAILERCGKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|68058161|gb|AAX88414.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 502

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 74/429 (17%), Positives = 137/429 (31%), Gaps = 68/429 (15%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 52  IGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYESEILRLTTGCSVI 111

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   +E          +EL A+K+E+    E+        + +      +   L 
Sbjct: 112 VTGKVVESPSEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 164

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 165 PRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 224

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 225 RSENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 284

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           N V+++F
Sbjct: 285 MVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENFVNSDF 344

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH        F   + V    +       
Sbjct: 345 AQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDI----- 399

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
                R   D     A     PG+  I            +G   +   +   +     + 
Sbjct: 400 KAFYMRLNDDGKTVAAMDVLAPGIGEI------------IGGSQREERLEVLDKRMEEMG 447

Query: 393 MQDGDSCFF 401
           +   D  ++
Sbjct: 448 LNPDDYWWY 456



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    EV+ +    +G++ +             +
Sbjct: 407 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEVLDKRMEEMGLNPDDYW----WYRDLRK 461

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 462 YGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPR 498


>gi|322800910|gb|EFZ21742.1| hypothetical protein SINV_00256 [Solenopsis invicta]
          Length = 686

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/315 (20%), Positives = 121/315 (38%), Gaps = 23/315 (7%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKS 64
             DL  +     V L G +H  R  G   F+ +R       G+  V         +   +
Sbjct: 66  IKDLNKNLENQTVWLRGRLHTSRAKGKQCFIVLRQQSYTVQGLAAVTEAVSKQMIKFISN 125

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------- 117
           +  E ++ +  +VM   ++  + +     IEL  ++I ++S A+        +       
Sbjct: 126 ITKESIIDVMAVVMPVPSKIESCSQK--DIELHLKEIFVVSSAKPQLPLQIEDAARSVCE 183

Query: 118 -------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                      +  R   R LDLR             +    R  +  + F+E  TP + 
Sbjct: 184 ADETALTVRVNQDTRLDNRVLDLRTPANQAIFRVEAGVCKLFRDILTRKGFVEIHTPKII 243

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           +++ EG  +    S     ++ A  Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R 
Sbjct: 244 SAASEGGANVFTVSYFKGNAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRH 301

Query: 231 PGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             EF  LD+EM+F     ++++T+  +   +F+   +        +   Y     ++   
Sbjct: 302 LTEFVGLDLEMAFKYHYHEVIDTIGQMFTELFKGLRDIYADDIAAVSQQYPVEPFKFLEP 361

Query: 290 KPDLRNPIIMHNVTE 304
              L  P  +  + E
Sbjct: 362 ALKLEYPQAIELLAE 376



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 12/112 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF            N+     +  YD+   G EI SG  R H  + + +   +
Sbjct: 412 KYPLAVRPFYTMPD------PNNPK--VSNSYDMFMRGEEIISGAQRIHDPDFLTERAKH 463

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            GI       +      AF+ G PPH G   G++R+VML LG  N+R+VS+F
Sbjct: 464 HGIDI----EKIKSYIDAFRYGCPPHAGGGIGMERVVMLYLGLDNIRKVSIF 511


>gi|226226853|ref|YP_002760959.1| asparaginyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226090044|dbj|BAH38489.1| asparaginyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 433

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/309 (24%), Positives = 126/309 (40%), Gaps = 31/309 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSV 65
             DL    VG  V +  W+  +R  G + F  +RD  GI Q   V A    A +E    +
Sbjct: 8   IADLQ-HHVGQTVTVRAWITHLRSKGKLGFAVVRDGTGIMQAVVVKAEVPEAAWEAFGHL 66

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G V + +          G  E+  Q++E++  +          +E+     
Sbjct: 67  TQESSVALTGEVRADAR-------APGGFEMGVQQLELIGAS--PLDYPIQPKEHGVDFL 117

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R   LR       +  R  +  ++     A +F+ C TPILTA+  E A        
Sbjct: 118 LDNRTFWLRSPRQVAIMRVRHELEQAVHDFFYARDFVRCDTPILTAAIGERAG-LFGTEY 176

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++G+ Y L Q  Q Y + L A+   R +   P FR E  ++ R   EF+ ++ EM++ +
Sbjct: 177 FDEGTAY-LAQTGQLYGEAL-AAAMGRIYTFGPTFRAEKSKTRRHLTEFWMIEPEMAWYD 234

Query: 246 QDDILNTMENVLRGVFEEF---------------SNGNTVSNNFLRICYDDAIRRYGTDK 290
           QDD ++  E  +R + E                 S  + VS  FLR+ Y DA+    +  
Sbjct: 235 QDDNMDLQEEFVRYLVERVLERRQEELKVLERDTSKLDCVSQPFLRLDYTDAVAFAQSKG 294

Query: 291 PDLRNPIIM 299
            D++    +
Sbjct: 295 SDIKWGDDL 303



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 55/153 (35%), Gaps = 27/153 (17%)

Query: 418 NHIAQELG-----IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                +LG     +I        +++++P     +E K      NP         +++  
Sbjct: 297 IKWGDDLGAPDEALIVDEHQRPVFVVNYP-----KEAKAFYMKENP-----ADPRTVRCA 346

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DLL+ +           EI  G  R    E +L   ++ G+        +G      + G
Sbjct: 347 DLLAPEGRG--------EIIGGSQREDDYEKILARLTHEGLPV----EAYGWYLDLRRYG 394

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
              H G   G++R +  + G +++RE   FP  
Sbjct: 395 TFTHSGFGLGLERTIAWICGIEHIRECIPFPRM 427


>gi|281420624|ref|ZP_06251623.1| lysine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281405397|gb|EFB36077.1| lysine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 576

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 112/273 (41%), Gaps = 10/273 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +    D    V ++G +   R  G   F +++D  G  QV    D  C + 
Sbjct: 36  NAFSTDIKAEFKDEDEPRQVVIAGRMMGRRVMGKASFAELQDSKGRIQVYIARDEICPDE 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---- 117
            K + +     +  +      +       TG+I + A+++ +LS + +    V  +    
Sbjct: 96  NKDLYNTVFKKLLDIGDFIGVKGFVFRTQTGEISVHAKELCLLSKSLKPLPIVKYKDGVA 155

Query: 118 --REYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSP 174
             +     +R++ R++DL  +   K+    R  ++ ++R  +    + E  TP L + + 
Sbjct: 156 YDKFDDPELRYRQRYVDLIVNDGVKDTFLQRATVLRTLRSVLDNAGYTEVETPTLQSIAG 215

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y +  A + Y + L+  GF+  ++I   FR+E    +  P E
Sbjct: 216 GASARPFITHFNALDQDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRNHNP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           F  +++ + + + + ++   E +L  +    + 
Sbjct: 274 FTCMELYVQYKDYNWMMAFTEKLLETICIAVNG 306



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 89/256 (34%), Gaps = 39/256 (15%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W  +  +  L  I   ++        G +           I   +  + G D       +
Sbjct: 288 WMMAFTEKLLETICIAVNGKPEREIDGNIISFKAPYRRLPILDAIKEKTGFDCNGKTEEE 347

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFC--------WIMDFPFYEWNEEEKKIDFAHN 457
              FC       +    +  +I+    EFC        +I D+P               +
Sbjct: 348 IRAFCKEKGMDVDETMGKGKLIDELFGEFCEGTFLQPTFITDYP------------VEMS 395

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           P T        L           +++L+ NG E+A+     +      + F +     + 
Sbjct: 396 PLTKMHRSKPGL---------TERFELMVNGKELANAYSELNDPIDQEERFIDQMKLADK 446

Query: 518 VENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLM 573
            ++          RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP  +    +  
Sbjct: 447 GDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGKTFIQEVLFFPQMKPEKKM-- 504

Query: 574 GSPSTVSVEQLRELGL 589
             P + ++++  E+G+
Sbjct: 505 --PQS-TIKEWAEIGV 517


>gi|73945455|ref|XP_849060.1| PREDICTED: similar to Asparaginyl-tRNA synthetase, cytoplasmic
           (Asparagine--tRNA ligase) (AsnRS) isoform 1 [Canis
           familiaris]
          Length = 559

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/348 (19%), Positives = 126/348 (36%), Gaps = 23/348 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
               G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + 
Sbjct: 132 EEYRGQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLSDDLCQCYNGVVLATESSVT 191

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G +              G  ELS    E++ +A           E    ++   R + 
Sbjct: 192 VYGTLNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMM 247

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R + + K +  R+ +    R       + E + P L  +  EG           + +F 
Sbjct: 248 IRGENMSKILKARSVVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFGEEAF- 306

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  +++LN 
Sbjct: 307 -LTQSSQLYLETCIP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFEELLNR 364

Query: 253 MENVLRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           +E+++  V +                N       F R+ Y DAI           +    
Sbjct: 365 LEDLVCDVVDRVLKSPAGSIVRDLNPNFKPPKRPFKRMNYSDAIVWLKEHNIKKEDG-TF 423

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           +   E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 424 YEFGEDIPEAPERLMTDSINEPILLCRFPVEIKSFYMQRCPEDSRLTE 471



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +S     +         L+ N  EI  G +R   SE +L  +  
Sbjct: 450 RFPVEIKSFYMQRCPEDSRLTESVDV-------LMPNVGEIVGGSMRIWDSEEILAGYKR 502

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 503 EGIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCK 558

Query: 571 L 571
            
Sbjct: 559 P 559


>gi|282859169|ref|ZP_06268291.1| lysine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587988|gb|EFB93171.1| lysine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 575

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 61/305 (20%), Positives = 122/305 (40%), Gaps = 25/305 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             D    V ++G +   R  G   F +++D  G  QV    D  C    K + +++   +
Sbjct: 47  KEDEQREVVIAGRMMGRRVMGKASFAELQDSKGRIQVYITRDDICPGEDKDLYNKFFKKL 106

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREY-----PESIRFK 127
             +      +        G+I + A++I +LS + + LP+    + E          R++
Sbjct: 107 LDIGDFIGIKGFVFRTQMGEISVHAKEITLLSKSLKPLPVVKQKDGETFDSFDDPEQRYR 166

Query: 128 YRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSR 185
            R++DL  +  +    +KR  ++ +MR       + E  TP L   +    AR F+    
Sbjct: 167 QRYVDLVVNDGVKDTFLKRATVLRTMRNFFDEAGYTEVETPTLQTIAGGASARPFITHFN 226

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + +
Sbjct: 227 ALNNDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRFHNP-EFTCMELYVQYKD 284

Query: 246 QDDILNTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRR------YGTDK 290
            + +++  E +L  +    +                 F R+   DAI+       YG  +
Sbjct: 285 YNWMMSFTEQLLEKICVAVNGKPEVQMGDKVISFKAPFRRLPILDAIKEKTGFDLYGKSE 344

Query: 291 PDLRN 295
            ++RN
Sbjct: 345 DEIRN 349



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+A+     +      + F
Sbjct: 379 EGTYIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERF 438

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  +  ++          RA Q GMPP  GI  GIDR+VML+ G + ++EV LFP 
Sbjct: 439 IEQMKLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGKEYIQEVLLFPQ 498

Query: 565 SQ 566
            +
Sbjct: 499 MK 500


>gi|237738740|ref|ZP_04569221.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423843|gb|EEO38890.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 461

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 67/390 (17%), Positives = 127/390 (32%), Gaps = 56/390 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
           G   +   + L GWV ++R      F+++ D       Q+V       F+    +     
Sbjct: 11  GEEYLNKEIELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSIAST 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++               +E+ A++IE+   A+ L  P+  +R   E +R K   
Sbjct: 71  IKVKGTLVKSEGSG-------QDLEVKAKEIEVFQKAD-LEYPLQNKRHTFEYLRTK-AH 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++       NF+   TPI+T S  EGA +    +  +   
Sbjct: 122 LRPRTNTFSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEMFRITTFDLNK 181

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       + F   +   P FR E   + R   E
Sbjct: 182 VPKKENGEIDFSKDFFGKSTNLTVSGQLNVETYCAAFRNVYTFGPTFRAEYSNTARHASE 241

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------N 272
           F+ ++ E++F +    +   E +++ + +   +                          N
Sbjct: 242 FWMIEPEIAFGDLGANMELAEAMVKYIIKYVMDNCPEEMEFFNSFIEKGLFDKLNNVLNN 301

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           +F R+ Y +AI            P+   +   +EH  +     F K     P +      
Sbjct: 302 DFARVTYTEAIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYFKK-----PVFVTDYPK 356

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                  +   D     A     PG+  I 
Sbjct: 357 DIKAFYMKLNDDNKTVRAMDLLAPGIGEII 386



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P        K I      F M          +D  +++A   DL+  G  EI
Sbjct: 347 KPVFVTDYP--------KDIKA----FYMK-------LNDDNKTVRAM--DLLAPGIGEI 385

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    +++++    +G++KE  E          + G  PH G   G +R++M L 
Sbjct: 386 IGGSQREDNYDLLVKRMDELGLNKEDYE----FYLDLRRFGSFPHSGYGLGFERMMMYLT 441

Query: 552 GAKNVREVSLFPMSQN 567
           G +N+R+V  FP + N
Sbjct: 442 GMQNIRDVIPFPRTPN 457


>gi|224369336|ref|YP_002603500.1| LysS1 [Desulfobacterium autotrophicum HRM2]
 gi|223692053|gb|ACN15336.1| LysS1 [Desulfobacterium autotrophicum HRM2]
          Length = 504

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 56/272 (20%), Positives = 107/272 (39%), Gaps = 9/272 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G+ + G    ++G +  V   G   F+  +D  G  Q     +     +    +   +  
Sbjct: 61  GLGENGPVFSVAGRMMAVNKFGKSSFIRFKDRTGQIQAYLQKNRVGDGVYDLFKKLDI-- 118

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +  +         TG+  L A+   +LS +   PLP           R++ R+LD
Sbjct: 119 --GDFVGITGSLFQTR--TGEWTLLAENFRLLSKS-MRPLPEKFHGIKDPEKRYRQRYLD 173

Query: 133 LRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           L  +   + I  +R++ I  MR      +F+E  TP++   +               G  
Sbjct: 174 LIMNKEARAIFTRRSKTIRLMRTFFEQRDFMEVETPMMQPVAGGAEATPFKTWHNALGME 233

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   ++   +D+++
Sbjct: 234 LFLRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNP-EFTMVEFYQAYATYEDLMD 292

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
             E + R +  E +   T+      I +  + 
Sbjct: 293 MTEVMFRHLALEVTGSETIQYQGDSIDFSKSW 324



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 4/123 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + ++       +++L   G EIA+G    +      + F
Sbjct: 380 EPKLIQPTFITGYPVEVSPLSRKSEANQELTDRFELFIAGREIANGFSEINDPVDQHERF 439

Query: 509 ----SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
               +                  A + GMPP  G   GIDR++MLL  + ++REV LFP 
Sbjct: 440 LGQAAKRSKGDVEAHVMDTDYVEALEYGMPPTAGEGIGIDRLIMLLTDSASIREVILFPH 499

Query: 565 SQN 567
            +N
Sbjct: 500 MKN 502


>gi|153951744|ref|YP_001398557.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|166229803|sp|A7H4X7|SYK_CAMJD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|152939190|gb|ABS43931.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 501

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/286 (21%), Positives = 124/286 (43%), Gaps = 25/286 (8%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA----KSVRSEWVLCIDGLV 77
            ++G +  +R  G  IF +I D     Q+  + DS   E+     K++ +  ++ + G  
Sbjct: 59  VVAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTILKKNLEAGDIVLVKG-- 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
                        TG+  L A ++++ + A  +PLP           R++ R++D+  + 
Sbjct: 117 -------FPFVTKTGEFSLHASEVKLATKA-IVPLPEKYHGLTDIEQRYRKRYVDMIMNA 168

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K+ + R+++++ +R     + F+E  TP++   +        V    + G    L  
Sbjct: 169 EVRKDFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRI 228

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+  F+I  CFR+E       P EF  ++   ++    D+++  E +
Sbjct: 229 APELYLKRLVVGGFEAVFEINRCFRNEGMDLTHNP-EFTTIEFYWAYHNYKDLMDLTEEL 287

Query: 257 LRGVFEEFS---------NGNTVSNNFLRICYDDAIRRYGTDKPDL 293
              + ++ +              S  F RI Y DA+ +YG    DL
Sbjct: 288 FALLLDKLNLGKTIEFDGKMIDFSKPFERITYKDALCKYGGLDRDL 333



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 69/226 (30%), Gaps = 39/226 (17%)

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF---- 412
           A +  +L+    +   G +            +  L    G     I              
Sbjct: 289 ALLLDKLNLGKTIEFDGKMIDFSKPFERITYKDALCKYGGLDRDLIEDKEKILAKLKTDG 348

Query: 413 --------AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
                       +  +      +        ++ DFP             + +P +    
Sbjct: 349 FEANEKLELGHLQAELFD--NYVEEKLINPTFVSDFP------------ISISPLSRR-- 392

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF-- 522
                  +D  S  A +++L   G E+A+G    +      + F     +K   +     
Sbjct: 393 -------SDENSQIAERFELFICGRELANGFNELNDPLDQYERFLKQIEAKNAGDEEACE 445

Query: 523 --GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                  A   GMPP  G   GIDR+VMLL   K++R+V LFP  +
Sbjct: 446 MDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPAMR 491


>gi|323344925|ref|ZP_08085149.1| lysine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323094195|gb|EFZ36772.1| lysine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 578

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 105/256 (41%), Gaps = 10/256 (3%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F +++D  G  QV    D  C    K + +     +  +  
Sbjct: 52  REVVIAGRMMTRRVMGKASFAELQDSKGRIQVYITRDDICPGDNKELYNTVFKRLLDIGD 111

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFKYRFLD 132
               +       TG+I + A+ + +LS + +    V  +      R     +R++ R++D
Sbjct: 112 FIGVKGFVFKTQTGEISVHAKSLTVLSKSLKPLPIVKYKDGVAYDRFDDPELRYRQRYVD 171

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +  + +  +KR  I+ +MR  +    + E  TP L   +    AR F+         
Sbjct: 172 LVVNDGVKETFLKRAVILRTMRRILDDAGYTEVETPTLQNIAGGASARPFITHFNALNVD 231

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + ++
Sbjct: 232 MY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP-EFTCIELYVQYKDYNWMM 289

Query: 251 NTMENVLRGVFEEFSN 266
              E +L  +    + 
Sbjct: 290 EFTEKMLETICIAVNG 305



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 47/122 (38%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+A+     +      + F
Sbjct: 378 EGTFIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERF 437

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  +  ++          RA Q GMPP  GI  GIDR+VML+ G   ++EV  FP 
Sbjct: 438 VEQMKLADKGDDEAMVIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGKTTIQEVLFFPQ 497

Query: 565 SQ 566
            +
Sbjct: 498 MK 499


>gi|294142344|ref|YP_003558322.1| lysyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293328813|dbj|BAJ03544.1| lysyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 502

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/312 (21%), Positives = 138/312 (44%), Gaps = 37/312 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRL-----------SGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           R H   D+  ++ G + ++           +G +   R      FL I+D  G  Q  A 
Sbjct: 37  RKHKAADIQ-AEYGQYTKIDLEGMAIQRSIAGRIMAKRGP----FLVIQDVSGRIQAYAG 91

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D     + K +++++     G ++  + +   +    G + ++ +  ++L+ A   PLP
Sbjct: 92  KD-----VQKDLKAKFQGLDIGDIIGVTGQLHLSG--KGDLYVNMEDYQLLTKALR-PLP 143

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPIL-TA 171
                   +  R++ R++DL  +   +N  + R+++++++R  MI + F+E  TP++ T 
Sbjct: 144 EKFHGLTDQETRYRQRYVDLIVNEESRNAFIMRSKVVSAIRNFMIKKEFMEVETPMMHTI 203

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                AR F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R  
Sbjct: 204 PGGATARPFITHHNALDIEMY-LRVAPELYLKRLVVGGFERVFEINRNFRNEGL-SPRHN 261

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDA 282
            EF  ++  M++ +  D+++  E +L  +  E      +            + R+   DA
Sbjct: 262 PEFTMMEFYMAYADYKDLMDLTEEMLSSIATELCGSPKLPYGEHTVDFGGPYARLSMLDA 321

Query: 283 IRRYGTDKPDLR 294
           I++Y  D   ++
Sbjct: 322 IKKYCPDNETIQ 333



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +         P       + ND       +++    G E+A+G    + +E   Q F
Sbjct: 376 EPHLMQPTFITGYPADISPLARRNDENHFITDRFEFFIGGREVANGFSELNDAEDQDQRF 435

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K+  ++          RA + G+PP  G   GIDR+VML      +R+V LFP 
Sbjct: 436 KAQVAAKDAGDDEAMFYDADYIRALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFPA 495

Query: 565 SQ 566
            +
Sbjct: 496 MR 497


>gi|253688172|ref|YP_003017362.1| asparaginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251754750|gb|ACT12826.1| asparaginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 466

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 131/388 (33%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVV--ANPDSACF-EIAKSVRSEWVLC 72
           V S V + GWV   R    GI F+ + D      +    N + + + +    + +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFIAVYDGSCFNPLQAVVNNNLSNYQDDVLRLTTGCSVE 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G V++   E  +        EL A  + ++   ++        + +      +   L 
Sbjct: 76  ITGNVVASPGEGQS-------FELQATNVNVVGWVDDPDTYPMAAKRHSIEYLREVAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ---- 188
            R + +      R  +  ++        +   STP++TAS  EGA +    S ++     
Sbjct: 129 PRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDLENLP 188

Query: 189 ----------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+   A      Q      A      +   P FR E+  + R   EF+
Sbjct: 189 RTEQGKVDFSEDFFGKEAFLTVSGQLNGETYACALSNVYTFGPTFRAENSNTSRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F   DD+    EN+L+ VF+   N                        VS++F
Sbjct: 249 MIEPEVAFATLDDVAGLAENLLKYVFQAVLNERADDMAFFAERVDKEAITRLEKFVSSDF 308

Query: 275 LRICYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            ++ Y DA+           NP+    ++ +EH  +   + F   + V    +       
Sbjct: 309 AQVDYTDAVEILLNCGKQFENPVYWGVDLSSEHERYLAEQHFKAPVVVKNYPKDI----- 363

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 364 KAFYMRMNDDGKTVAAMDVLAPGIGEII 391



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R      +      +G++K      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLAELDSRLEEMGLNK----EDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 426 YGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|50121465|ref|YP_050632.1| asparaginyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|59798526|sp|Q6D453|SYN_ERWCT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|49611991|emb|CAG75440.1| asparaginyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 466

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 131/388 (33%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVV--ANPDSACF-EIAKSVRSEWVLC 72
           V S V + GWV   R    GI F+ + D      +    N + + + +    + +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFIAVYDGSCFNPLQAVVNNNLSNYQDDVLRLTTGCSVE 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G V++   E  +        EL A  + ++   ++        + +      +   L 
Sbjct: 76  ITGNVVASPGEGQS-------FELQATNVNVVGWVDDPDTYPMAAKRHSIEYLREVAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++        +   STP++TAS  EGA +    S ++     
Sbjct: 129 PRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDMENLP 188

Query: 190 -----------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+   A      Q      A      +   P FR E+  + R   EF+
Sbjct: 189 RTEQGKVDFSKDFFGKEAFLTVSGQLNGETYACALSNVYTFGPTFRAENSNTARHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F   DD+    EN+L+ VF+   N                        VS++F
Sbjct: 249 MIEPEVAFASLDDVAALAENLLKYVFQAVLNERADDMAFFAERVDKEAVTRLEKFVSSDF 308

Query: 275 LRICYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            ++ Y DA+           NP+    ++ +EH  +   + F   + V    +       
Sbjct: 309 AQVDYTDAVEILLNCGQQFENPVYWGVDLSSEHERYLAEQHFKAPVVVKNYPKDI----- 363

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 364 KAFYMRMNDDGKTVAAMDVLAPGIGEII 391



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R      +      +G++K      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLAALDSRLEEMGLNK----EDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 426 YGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|50084268|ref|YP_045778.1| lysyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|2501016|sp|Q43990|SYK_ACIAD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1359473|emb|CAA86924.1| lysyl-tRNA-synthase [Acinetobacter sp. ADP1]
 gi|49530244|emb|CAG67956.1| lysyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 509

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/309 (20%), Positives = 122/309 (39%), Gaps = 35/309 (11%)

Query: 4   YRTHSCGDLGVS--DVGS---------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL     D+           +V+++G V   R      F+ I+D  G  Q+  
Sbjct: 47  KREHYAADLQEQFKDIDKAQIEGSDKTYVKVAGRVMLNRGS----FMVIQDMTGRIQLYV 102

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +      +  ++++S  +  I       +AE        G + +  +  E+L+ +   PL
Sbjct: 103 DRKGLPADTLETIKSLDLGDI------IAAEGYIGRSGKGDLYVHLEGFELLTKSLR-PL 155

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA 171
           P           +++ R+LDL  +   +     R +++  +R  +  + F+E  TP++  
Sbjct: 156 PDKFHGLTDTEAKYRKRYLDLIVNEETRKTFEIRAQVVAGIRAFLTNQRFMEVETPMMHV 215

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 A+ F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   +   
Sbjct: 216 IPGGASAQPFVTHHNALDMELY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHN 274

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDD 281
           P EF  ++   ++ +  D++   EN+L  +  +      V            F +I   D
Sbjct: 275 P-EFTMIEFYQAYADYKDLMQLTENMLEKLALDILGTTDVPYGDEVYSFKGPFKKISMFD 333

Query: 282 AIRRYGTDK 290
           AI  +  D 
Sbjct: 334 AILEHNPDF 342



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 5/129 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E K +         P       + ND       +++    G E+A+G    +   
Sbjct: 379 FEETVETK-LRQPTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPI 437

Query: 503 VMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F      K+  ++           A + G+PP  G   GIDR+VM+   A ++R+
Sbjct: 438 DQAERFQAQVAEKDAGDDEAMHYDADFIEALEYGLPPTAGQGIGIDRLVMIFANAPSIRD 497

Query: 559 VSLFPMSQN 567
           V LFP  + 
Sbjct: 498 VLLFPHMRR 506


>gi|312130493|ref|YP_003997833.1| lysyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311907039|gb|ADQ17480.1| lysyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 567

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/337 (18%), Positives = 119/337 (35%), Gaps = 27/337 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F +++D  G  Q+    D  C +  K++ +     +  +  
Sbjct: 51  KDVSVAGRLMSFRIMGSASFAELQDETGRIQIYIRRDDICPDEDKTLYNTVFKKLLDIGD 110

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKYRFL 131
                       TG+I +  +  ++LS + +    V  + +            RF+ R++
Sbjct: 111 IIGINGYCFETQTGEISIHVRSFKLLSKSLKPLPVVKRDEQGNVYDGFTDPEQRFRQRYV 170

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL       +  +KR  II +MR     + ++E  TPIL +      AR F+        
Sbjct: 171 DLIVNPENREIFIKRATIIRTMRQIFDNKGWLEVETPILQSIHGGAAARPFVTHHNTLDI 230

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A + Y + L+  GFD  ++    FR+E       P EF  L+  +++ +   +
Sbjct: 231 PLY-LRIANELYLKRLIVGGFDGVYEFGKMFRNEGMDRTHNP-EFTALEFYVAYKDYHWM 288

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           +   E +L  V    +     +              +G +  D + P    ++ E     
Sbjct: 289 MEFTEELLEKVALAVNEDTKFT--------------FGENVIDFQGPYAKLSIIEAIEKY 334

Query: 310 EFRVFSKI--LSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                       +    + W I      G     D +
Sbjct: 335 TGVNVDTASEEELRLKCKEWGIEIDDTMGKAKLIDEI 371



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 59/333 (17%), Positives = 101/333 (30%), Gaps = 25/333 (7%)

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH- 308
             T+   +R +F+        +     I    A R + T    L  P+ +    E ++  
Sbjct: 185 RATIIRTMRQIFDNKGWLEVETPILQSIHGGAAARPFVTHHNTLDIPLYLRIANELYLKR 244

Query: 309 ------SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
                      F K+                     A+ D    W     +  L  +   
Sbjct: 245 LIVGGFDGVYEFGKMFRNEGMDRTHNPEFTALEFYVAYKD--YHWMMEFTEELLEKVALA 302

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           ++E         V          +I   ++   G +    + +         + R    +
Sbjct: 303 VNEDTKFTFGENVIDFQGPYAKLSIIEAIEKYTGVNVDTASEE---------ELRLKC-K 352

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E GI   +      ++D  F E  EE   +         P       K +        ++
Sbjct: 353 EWGIEIDDTMGKAKLIDEIFGEKVEE--HLIQPTFIIDYPVEMSPLTKKHRSKPGLVERF 410

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGG 538
           +L  NG EIA+     +      + F       E  +           RA + GMPP  G
Sbjct: 411 ELFVNGKEIANAYSELNDPLDQRERFEEQLRLAERGDEEAMALDEDFIRALEYGMPPTAG 470

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           I  GIDR+ MLL    +++EV  FP  +    L
Sbjct: 471 IGIGIDRLTMLLTNNASIQEVLFFPQMRPEKKL 503


>gi|228997302|ref|ZP_04156924.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229004927|ref|ZP_04162654.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228756275|gb|EEM05593.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228762394|gb|EEM11319.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 432

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 15/262 (5%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V L GWV ++R  G + FL +RD  G+ Q V   D A +     V  E V+ I G ++
Sbjct: 19  KVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLEKDLAGY----KVDVESVVQIIGELV 74

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPESIRFKYRFLDLRRDT 137
             +   +        +EL  +++++L+ AE LP  V   +           R + LR + 
Sbjct: 75  ETTKTEL-------GVELLVEEVKVLNTAEPLPFEVNKRKLQVGLDQMLNERVISLRHER 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           +      ++ ++ +    +I  +F    TP + +   EG  +        + ++ A  Q+
Sbjct: 128 IQAIFTIQSTLVQAFSEFLIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAYLA--QS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENV 256
           PQ YKQ+++A GF+  F+IAP +R E   S R   E+  LD+EM F+ +  +++    +V
Sbjct: 186 PQFYKQMMVAGGFELVFEIAPVYRAEHHNSSRHLNEYISLDVEMGFIEDFYEVMALEADV 245

Query: 257 LRGVFEEFSNGNTVSNNFLRIC 278
           LR +FE+           L++ 
Sbjct: 246 LRYMFEQVGQKCEKELVLLQVT 267



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 62/155 (40%), Gaps = 26/155 (16%)

Query: 413 AADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           A D      + +G      +  +F +I  +P             A   +TMP    +++ 
Sbjct: 296 AGDLDTEGEKLVGKYVKETYGSDFVFITHYP-----------KEARPMYTMPNKENQAVT 344

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            +         +DL+  G EI SG  R H   ++L +F   G+        F      F+
Sbjct: 345 DS---------FDLLYKGLEITSGAQRIHEYRMLLASFKEKGLQP----ENFESYINTFR 391

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G PPHGG   G++R+V   L   NVRE S FP  
Sbjct: 392 YGCPPHGGFGIGLERLVYKFLELSNVREASAFPRD 426


>gi|261821337|ref|YP_003259443.1| asparaginyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261605350|gb|ACX87836.1| asparaginyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 466

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 131/388 (33%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVV--ANPDSACF-EIAKSVRSEWVLC 72
           V S V + GWV   R    GI F+ + D      +    N + + + +    + +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFIAVYDGSCFNPLQAVVNNNLSNYQDDVLRLTTGCSVE 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G V++   E  +        EL A  + ++   ++        + +      +   L 
Sbjct: 76  ITGNVVASPGEGQS-------FELQATHVNVVGWVDDPDTYPMAAKRHSIEYLREVAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ---- 188
            R + +      R  +  ++        +   STP++TAS  EGA +    S ++     
Sbjct: 129 PRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDLENLP 188

Query: 189 ----------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+   A      Q      A      +   P FR E+  + R   EF+
Sbjct: 189 RTEQGKVDFSEDFFGKEAFLTVSGQLNGETYACALSNVYTFGPTFRAENSNTSRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F   DD+    EN+L+ VF+   N                        VS++F
Sbjct: 249 MIEPEVAFASLDDVAGLAENLLKYVFQAVLNERADDMAFFAERVDKEAVTRLEKFVSSDF 308

Query: 275 LRICYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            ++ Y DA+           NP+    ++ +EH  +   + F   + V    +       
Sbjct: 309 AQVDYTDAVEILLNCGQQFENPVYWGVDLSSEHERYLAEQHFKAPVVVKNYPKDI----- 363

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 364 KAFYMRMNDDGKTVAAMDVLAPGIGEII 391



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R      +      +G++K      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLAQLDSRLEEMGLNK----EDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 426 YGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|225581052|gb|ACN94629.1| GA10495 [Drosophila miranda]
          Length = 557

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/345 (19%), Positives = 135/345 (39%), Gaps = 22/345 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G  + GS V++ GWVHR+R  G  +IF+ +RD  G  Q V N        A ++ +E  +
Sbjct: 129 GTENRGSRVKVYGWVHRLRRQGKALIFITLRDGTGFLQCVLNDQLCQTYDALTLSTESTV 188

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  EL+    E++ +A           E    ++   R +
Sbjct: 189 VLFGTLKLIPEG----KTAPGGHELNVDYWELIGLAPPGGADAILNEEAQPDVQLDNRHI 244

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R+ ++ + R   +A  + E + P L  +  EG          ++ ++
Sbjct: 245 MIRGENTSKVLKMRSVVMQAFRAHYLARGYNEVTPPTLVQTQVEGGSTLFKLQYFSEEAY 304

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  +D+L+
Sbjct: 305 --LTQSSQLYLETCLP-ALGDVFTIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFEDLLD 361

Query: 252 TMENVLRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            +E+++  V +                +    +  F R+ Y DAI+    +    ++   
Sbjct: 362 RLEDLVCDVVDRVLKSPWGNLVKELNPDFKPPTKPFRRMNYSDAIKWLKENNV-TKDDGT 420

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
            +   E    +  R  +  ++       +    K    +R   D+
Sbjct: 421 FYEFGEDIPEAPERKMTDAINEPIMLCRFPAEIKSFYMSRCPEDK 465



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R   SE +L+ +  
Sbjct: 448 RFPAEIKSFYMSRCPEDKTLTESVDV-------LLPNVGEIVGGSMRIFDSEELLKGYQR 500

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI  +     +         G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 501 EGIDPKP----YYWYTDQRIYGTLPHGGYGLGLERFLCWLLNRYHIREVCLYPR 550


>gi|228474093|ref|ZP_04058834.1| lysine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228274607|gb|EEK13448.1| lysine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 561

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/291 (20%), Positives = 113/291 (38%), Gaps = 24/291 (8%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS--EWVLCI 73
           + G  V ++G +   R  G   F  ++D  G  Q+    D  C    K++ +     L  
Sbjct: 42  EEGKDVVVAGRLMSFRIQGKASFATLQDSSGRVQLYFKRDDLCPGEDKTLYNEVFKKLLD 101

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-------GEREYPESIRF 126
            G  +         N+  G+  +  ++ ++L                   +       R+
Sbjct: 102 LGDFIGVEGTLFTTNM--GEKSIEVKQFKVLCKTLRPLPLPKVDAQGKVHDEFNDVEQRY 159

Query: 127 KYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R++DL  +   K +  KR R+ N+MR       +IE  TPIL A      AR F+   
Sbjct: 160 RMRYVDLVVNPQVKEVFLKRNRLFNAMREYFNNHGYIEVETPILQAIPGGASARPFITHH 219

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + Y + L+  GFD  ++ A  FR+E       P EF  +++ +++ 
Sbjct: 220 NALDIPLY-MRIANELYLKRLIVGGFDGVYEFAKNFRNEGMDRTHNP-EFTGMEIYVAYK 277

Query: 245 EQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY 286
           + + ++   EN+L    +  +                 + R+   +AI+R+
Sbjct: 278 DYNWMMEFTENLLEYCAKAVNGTTKTTFGKHEVDFKAPYPRVTMTEAIKRF 328



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 57/154 (37%), Gaps = 11/154 (7%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 371 EGNFIQPTFITDYPKEMSPLTKEHRSDKNLTERFELMVCGKEIANAYSELNDPIDQRERF 430

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  E  ++          RA + GMPP  G+  G+DR++M L   + ++EV  FP 
Sbjct: 431 EAQMALSERGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLIMFLTNNETIQEVLFFPQ 490

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKI 598
            +            V + +  +L L +++   K+
Sbjct: 491 MRPEH-------KEVELSEDEKLILDLLKKDNKL 517


>gi|3864|emb|CAA39699.1| lysine--tRNA ligase [Saccharomyces cerevisiae]
          Length = 591

 Score =  182 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 106/263 (40%), Gaps = 15/263 (5%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIAKS----VRSEWVLC 72
             V ++G +H  R  G  + F  +  D   +  +    D    E  +     ++   ++ 
Sbjct: 122 EKVSIAGRIHAKRESGSKLKFYVLHGDGVEVQLMSQLQDYHDPESYEKDHDLLKRGDIVG 181

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           ++G V      T       G++ +   ++++L+      LP        +  R++ R+LD
Sbjct: 182 VEGYV----GRTQPKKGGEGEVSVFVSRVQLLTPCL-HMLPADHFGFKDQETRYRKRYLD 236

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +       + R+ II  +R  +    FIE  TP++   +    A+ F+         
Sbjct: 237 LIMNKDARNRFITRSEIIRYIRKFLDQRKFIEVETPMMNVIAGGATAKPFITHHNDLDMD 296

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ + + L+  G DR ++I   FR+E       P EF   +   ++ +  D++
Sbjct: 297 MY-MRIAPELFLKQLVVGGLDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLM 354

Query: 251 NTMENVLRGVFEEFSNGNTVSNN 273
           +  E +   + +E +    +  +
Sbjct: 355 DMTELMFSEMVKEITGSYIIKYH 377



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 4/121 (3%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E E         F  PQ      K +        ++++     EI +     +       
Sbjct: 454 ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTELNDPFDQRA 513

Query: 507 AFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F      K+  ++           A + G+PP GG   GIDR+ M L  +  +REV LF
Sbjct: 514 RFEEQARQKDQGDDEAQLVDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLF 573

Query: 563 P 563
           P
Sbjct: 574 P 574


>gi|325578443|ref|ZP_08148578.1| asparagine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160179|gb|EGC72308.1| asparagine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 467

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 73/388 (18%), Positives = 128/388 (32%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       QV+ N D   +E     + +   + 
Sbjct: 17  IGEKVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQVIVNNDIENYESEVLRLTTGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G ++   AE          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGTIVESPAEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RGEDGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           N V+++F
Sbjct: 250 MVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLKFFEKHVDKDVITRLENFVNSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH        F   + V    +       
Sbjct: 310 AQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+ +    +G++       +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDKRMEEMGLNP----EDYWWYRDLRK 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 427 YGTVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPR 463


>gi|15896505|ref|NP_349854.1| asparaginyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|20139906|sp|Q97E56|SYN_CLOAB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|15026334|gb|AAK81194.1|AE007821_11 Aspartyl/asparaginyl-tRNA synthetase [Clostridium acetobutylicum
           ATCC 824]
 gi|325510663|gb|ADZ22299.1| asparaginyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 463

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 86/416 (20%), Positives = 144/416 (34%), Gaps = 59/416 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEW 69
           L     G  VRLSGWV  +R      F++I D       QVV +     F+         
Sbjct: 12  LSSEFGGKKVRLSGWVRTIRASKSFGFIEINDGSFFKNIQVVFDDKLDNFKEISKFIISS 71

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + ++G  +                E+ A+ I +   ++    P+  +R   E +R    
Sbjct: 72  TITVEGEFVLTP-------NAKQPFEIHAENITLEGNSD-NDYPLQKKRHTLEYLR-SIA 122

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L  R +T       R+    ++       +F+  +TP++TAS  EGA +    + ++  
Sbjct: 123 HLRPRSNTFSAVFRVRSLAAYAVHKFFQERDFVYVNTPLITASDAEGAGEMFQVTTLDLK 182

Query: 190 --------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                          F+   A      Q      A  F   +   P FR E+  + R   
Sbjct: 183 NPPKNEEGNIDFSKDFFGKKANLTVSGQLSAETFALAFRNVYTFGPTFRAEESNTTRHAA 242

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVS 271
           EF+ ++ EM+F E  D L+T E +++ +            EF N            N V+
Sbjct: 243 EFWMIEPEMAFAELSDYLDTAEEMVKYIINFVMENAPEEMEFFNTRIDKGLFDRLHNVVN 302

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
           + F RI Y +A+            P+   +   TEH  +   +VF K L V    +    
Sbjct: 303 SEFGRITYTEAVDILEKSGEKFEYPVKWGIDLQTEHERYLTDKVFKKPLFVTDYPKDI-- 360

Query: 330 PAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE 385
                   R   D     A     PG+  I   +  S     +  + K +  +N  
Sbjct: 361 ---KAFYMRINDDNKTVAAADLLVPGVGEI---IGGSQREERLAVLEKRMEELNLN 410



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 51/149 (34%), Gaps = 24/149 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  + +    +  ++ D+P        K I      F M          ND     A  
Sbjct: 338 HERYLTDKVFKKPLFVTDYP--------KDIKA----FYMRI--------NDDNKTVAAA 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R     V+ +    + ++K      +       + G   H G   
Sbjct: 378 DLLVPGVGEIIGGSQREERLAVLEKRMEELNLNK----EDYWWYLELRKYGETKHSGYGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G +R++M L G  N+R+V  FP +    +
Sbjct: 434 GFERMIMYLTGISNIRDVIPFPRTTGSAE 462


>gi|300172738|ref|YP_003771903.1| lysyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887116|emb|CBL91084.1| Lysyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 493

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 73/331 (22%), Positives = 130/331 (39%), Gaps = 23/331 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IAKSVRSEWVLCIDGLV 77
            V ++G +   R  G +IF D RD  G  Q+ A  D       I K       L I G+V
Sbjct: 61  EVIIAGRMIAKRGAGKVIFADFRDVSGKIQMYAKRDDLGENYPIIKRADLGDFLGIKGIV 120

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           M   A         G++ + A ++  L+ A   P+P           R++ R+LDL  + 
Sbjct: 121 MKTEA---------GELTILATELTHLTKALR-PMPDKFHGIADVETRYRKRYLDLIANE 170

Query: 138 LHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
                   R++II+++R  M +++F+E  TPIL T +    AR F+          Y + 
Sbjct: 171 ESFKKFQLRSKIISAIRGYMDSQDFMEVETPILQTEAGGAAARPFITHHNALNIDMY-MR 229

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + Y + L+  GF+R +++   FR+E       P EF  ++   ++++  D+++  E 
Sbjct: 230 IATELYLKRLVVGGFERVYEMGRIFRNEGMDPKHNP-EFTTMETYAAYMDFTDVMDETEG 288

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           + +      S+        L++ Y       G          ++   T      E  V  
Sbjct: 289 IFKAAAAVVSDD-------LKVTYQGTEIDLGVKFARKHMVDLIKEQTGIDFWQEMTVEE 341

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                +  +  +      G    AF +   E
Sbjct: 342 AQKLADDKHVKYEKYWHVGHIINAFFEEFVE 372



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 6/153 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A +  +     +    I++  F E+ E+   +      +  P       K N   S 
Sbjct: 343 QKLADDKHVKYEKYWHVGHIINAFFEEFVEDT--LIQPVFVYGHPVDVSPLAKKNADDSR 400

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
              +++L   G E  +     +        F      +E      EN       A + GM
Sbjct: 401 FTDRFELFIMGSEYGNAFTELNDPIDQRARFEAQVAERENGNDEAENIDEDFIEALEYGM 460

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG+  GIDR+VMLL  +  +R+V LFP  +
Sbjct: 461 PPTGGLGIGIDRLVMLLTDSDTIRDVLLFPTMR 493


>gi|332093529|gb|EGI98587.1| asparaginyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 463

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 127/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 13  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 68

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +     Q E+ A K+E+    E+        + +      +   L  R 
Sbjct: 69  CSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 128

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++  +     
Sbjct: 129 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 188

Query: 196 QA-----------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           Q                    Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 189 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 248

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +DI    E +L+ VF+                            +  +F ++
Sbjct: 249 PEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQV 308

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 309 DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 363

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 364 YMRLNEDGKTVAAMDVLAPGIGEII 388



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+ +    +G++K      +      
Sbjct: 367 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNK----EDYWWYRDL 420

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 421 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 459


>gi|204929826|ref|ZP_03220847.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204320820|gb|EDZ06021.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 494

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 125/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V   V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 44  VDQEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEEV----LHLTTG 99

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A K+E+    E+        + +      +   L  R 
Sbjct: 100 CSVVVTGKVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 159

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++  +     
Sbjct: 160 NLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 219

Query: 196 QA-----------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           Q                    Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 220 QGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 279

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + +D     E +L+ VF                             VS +F ++
Sbjct: 280 PEVAFADLEDNARLAEAMLKYVFNAVLEERADDMKFFAERVDKDAIARLERFVSTDFAQV 339

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 340 DYTDAVAILERCGKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEI-----KAF 394

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 395 YMRLNEDGKTVAAMDVLAPGIGEII 419



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++K      +      
Sbjct: 398 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDL 451

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 452 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 490


>gi|297833954|ref|XP_002884859.1| hypothetical protein ARALYDRAFT_478516 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330699|gb|EFH61118.1| hypothetical protein ARALYDRAFT_478516 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 625

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 57/366 (15%), Positives = 128/366 (34%), Gaps = 29/366 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           + +Y + + GD  V D      L+G +   R     + F D+       QV+A+   +  
Sbjct: 122 IEKYGSLNNGD-HVEDANE--SLAGRIMSKRSSSSKLFFYDLHGDDFKVQVMADASKSGL 178

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + A+ ++    +    +V              G++ +  +   +LS    +         
Sbjct: 179 DEAEFLKLHSNVKRGDIV---GVTGFPGKTKRGELSIFPRSFILLSHCLHMMPRKADNVN 235

Query: 120 --------------------YPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIA 158
                                 +  R++ R+LDL  +  + +    R  II+ +R  +  
Sbjct: 236 AKKPEIWVPGETRNPEAYVLKDQESRYRQRYLDLMLNVEVRQIFKTRAHIISYIRRFLDN 295

Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
           +NF+E  TP++   +   A    V    +      +  AP+ + + L+  G +R ++I  
Sbjct: 296 KNFLEVETPMMNMIAGGAAARPFVTHHNDLDMRLYMRIAPELFLKQLIVGGLERVYEIGK 355

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
            FR+E       P EF   +  M+F + +D++   E++L G+ +E + G  +  +     
Sbjct: 356 QFRNEGIDLTHNP-EFTTCEFYMAFADYNDLMKMTEDMLSGMVKELTGGYKIKYHANGYD 414

Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
            D     +      +     +  V    +  +         +      + +         
Sbjct: 415 KDPIEIDFKPPFRRIEMIGELEKVANLNIPKDLASEEANKYLIDACARFDVKCPPPQTTA 474

Query: 339 AFCDRM 344
              D++
Sbjct: 475 RLLDKL 480



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 4/111 (3%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQC 531
           ++   +++L  N  E+ +     +   V  Q F++    ++  ++    L      A + 
Sbjct: 513 NVLTERFELFINKHELCNAYTELNDPVVQRQRFADQLKDRQSGDDEAMALDETFCSALEY 572

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           G+ P GG   GIDR+ ML   ++N++EV LFP  +   D    + +  + E
Sbjct: 573 GLAPTGGWGLGIDRLAMLFTDSQNIKEVILFPAMRPPQDESAAAKAPSTEE 623


>gi|256272104|gb|EEU07106.1| Krs1p [Saccharomyces cerevisiae JAY291]
          Length = 527

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 106/263 (40%), Gaps = 15/263 (5%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIAKS----VRSEWVLC 72
             V ++G +H  R  G  + F  +  D   +  +    D    +  +     ++   ++ 
Sbjct: 58  EKVSIAGRIHAKRESGSKLKFYVLHGDGVEVQLMSQLQDYCDPDSYEKDHDLLKRGDIVG 117

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           ++G V      T       G++ +   ++++L+      LP        +  R++ R+LD
Sbjct: 118 VEGYV----GRTQPKKGGEGEVSVFVSRVQLLTPCL-HMLPADHFGFKDQETRYRKRYLD 172

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +       + R+ II  +R  +    FIE  TP++   +    A+ F+         
Sbjct: 173 LIMNKDARNRFITRSEIIRYIRRFLDQRKFIEVETPMMNVIAGGATAKPFITHHNDLDMD 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ + + L+  G DR ++I   FR+E       P EF   +   ++ +  D++
Sbjct: 233 MY-MRIAPELFLKQLVVGGLDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLM 290

Query: 251 NTMENVLRGVFEEFSNGNTVSNN 273
           +  E +   + +E +    +  +
Sbjct: 291 DMTELMFSEMVKEITGSYIIKYH 313



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 4/121 (3%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E E         F  PQ      K +        ++++     EI +     +       
Sbjct: 390 ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTELNDPFDQRA 449

Query: 507 AFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F      K+  ++           A + G+PP GG   GIDR+ M L  +  +REV LF
Sbjct: 450 RFEEQARQKDQGDDEAQLVDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLF 509

Query: 563 P 563
           P
Sbjct: 510 P 510


>gi|332717134|ref|YP_004444600.1| lysyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325063819|gb|ADY67509.1| lysyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 499

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/292 (21%), Positives = 126/292 (43%), Gaps = 20/292 (6%)

Query: 2   HRYRTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +L          ++ G  V ++G V+  R  G  +F+DI D  G  Q+ ++
Sbjct: 37  HFHRTLTNAELAEKYADIEPDTETGDTVTVAGRVYSSRNSG--MFMDIHDASGKVQIFSH 94

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D+      ++ R+   +   G ++  + +        G++ ++A++I +L+ +  LP+P
Sbjct: 95  KDTTP----ETARNLLPMIDIGDIIGVTGKVRRTK--RGELTINAEEITMLTKSL-LPMP 147

Query: 114 VFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                     +R++ R LD L  +      ++R++I++ +R  M AE F+E  TP+L   
Sbjct: 148 EKWHGVSDIELRYRKRHLDILANEDSKLRFLQRSKILSGIRRFMEAEGFLEVETPMLQTV 207

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLP 231
                 D              L  AP+ + +  + SG  D+ F+I   FR+E   +   P
Sbjct: 208 YGGATADPFKTFHNTLKMDMYLRIAPELFLKRTLVSGLSDKVFEINRNFRNEGVSTRHNP 267

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
            EF  ++   ++ + +DI+  +E +   +         V      I +    
Sbjct: 268 -EFTMMECYWAYADYEDIMGLVERLFETLAIALHGTTEVEFQGQTISFKGPF 318



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 4/126 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +    +    P+      K          +++  CN +E+ +     +  E   +  
Sbjct: 374 EGTLIQPSHVTHFPKDISPFAKEVPGEPRLVERFESYCNAWEVGNAFSELNDPEEQRRRM 433

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                       +          A   GMPP GG+  G+DR++MLL  A ++R+V LFP 
Sbjct: 434 VEQLEQAHARGEKDKQLDDEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIRDVILFPA 493

Query: 565 SQNFCD 570
            +N  D
Sbjct: 494 RRNKAD 499


>gi|157373980|ref|YP_001472580.1| lysyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189082971|sp|A8FRH9|SYK_SHESH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157316354|gb|ABV35452.1| lysyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 500

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/284 (22%), Positives = 129/284 (45%), Gaps = 25/284 (8%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G V   R      FL I+D  G  Q  A  D     + K +++++     G ++  +
Sbjct: 64  SIAGRVMAKRGP----FLVIQDVSGRIQAYAGKD-----VQKDLKAKFQGLDIGDIIGVT 114

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            +   +    G + ++ ++ E+L+ A   PLP        +  R++ R++DL  +   + 
Sbjct: 115 GQLHLSG--KGDLYVNMEEYELLTKALR-PLPEKFHGLTDQETRYRQRYIDLIVNEESRE 171

Query: 142 -IVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             + R+++++++R  M+ + F+E  TP++ T      AR F         + Y L  AP+
Sbjct: 172 AFIMRSKVVSAIRNFMVKKEFMEVETPMMHTIPGGASARPFETHHNALDIAMY-LRIAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F+I   FR+E   S R   EF  ++  M++ +  D+++  E +L  
Sbjct: 231 LYLKRLVVGGFERVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYSDYKDLMDLTEEMLSS 289

Query: 260 VFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDLR 294
           +  E      +            + R+   DAI++Y  D   ++
Sbjct: 290 IATELCGSPKLPYGEHVVDFGGPYARLSMLDAIKKYNPDNATIQ 333



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 55/153 (35%), Gaps = 10/153 (6%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG--NDLLSI 477
           +A+ LG+     +           E   E  +       F        S     ND    
Sbjct: 349 LAKSLGMTIEKFWTC----GQLLEEIFGETAETQLMQPTFITGYPADISPLARRNDDNHF 404

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGM 533
              +++    G E+A+G    + +E     F     +K+  ++           A + G+
Sbjct: 405 ITDRFEFFIGGREVANGFSELNDAEDQDNRFKAQVDAKDAGDDEAMFYDADYITALEHGL 464

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP  G   GIDR+VML      +R+V LFP  +
Sbjct: 465 PPTAGQGIGIDRLVMLFTNTHTIRDVILFPAMR 497


>gi|331651951|ref|ZP_08352970.1| asparagine--tRNA ligase [Escherichia coli M718]
 gi|331050229|gb|EGI22287.1| asparagine--tRNA ligase [Escherichia coli M718]
          Length = 481

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 127/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 31  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 86

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +     Q E+ A K+E+    E+        + +      +   L  R 
Sbjct: 87  CSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 146

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++  +     
Sbjct: 147 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 206

Query: 196 QA-----------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           Q                    Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 207 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 266

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +DI    E +L+ VF+                            +  +F ++
Sbjct: 267 PEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFSERVDKDAVSRLERFIEADFAQV 326

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 327 DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 381

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 382 YMRLNEDGKTVAAMDVLAPGIGEII 406



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+ +    +G++K      +      
Sbjct: 385 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNK----EDYWWYRDL 438

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 439 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 477


>gi|227431883|ref|ZP_03913906.1| asparaginyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352350|gb|EEJ42553.1| asparaginyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 435

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/300 (21%), Positives = 119/300 (39%), Gaps = 16/300 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+ + R  G I FL +RD           A+     FE AKS++ E  + +
Sbjct: 17  VGKTVTIGAWLRQKRGSGKIAFLQLRDGTAFFQGVVAKADVSEEVFETAKSLKQETSIYV 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +  +          E++   I+++  + + P+     +E+     F  R L L
Sbjct: 77  TGEIHEDARSSF-------GYEMAVSDIKVIGESHDYPITP---KEHGTEFLFDERHLYL 126

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  ++ +       E F +   P+LT S+PEG  +        + +F  
Sbjct: 127 RHLKPFATLKIRNTLVAATYEFFNKEGFTKLDAPVLTGSAPEGTTELFETDYFGEPAF-- 184

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM+F++Q++ L   
Sbjct: 185 LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAFMDQEESLKLQ 243

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           E  +  +  +    N    + L+   D          P +     +  + ++    E+ V
Sbjct: 244 ERYIAFLISKVLENNDQELDILKRDKDLLRSYTQLPYPRVSYDDAVKLLQDNDFDVEWGV 303



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 53/157 (33%), Gaps = 29/157 (18%)

Query: 426 IINCNCFEFCWIMDF--------------PFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           ++  N F+  W +DF              P +  N        A  PF M +        
Sbjct: 291 LLQDNDFDVEWGVDFGSPEETFLANHFAKPVFIVN-----FPKAIKPFYMKRHKTRDDIV 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
                +    Y       EI  G  R+   + +      +G++     + +       + 
Sbjct: 346 VSADLLAPEGY------GEIIGGSERDTDYDYLKNEIEKLGLNM----DEYAWYLDLRKY 395

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           G  PH G   G++R+V  + G +++RE   FP   N 
Sbjct: 396 GSVPHSGFGLGLERMVTFVTGEEHIREAIPFPRMTNR 432


>gi|315636083|ref|ZP_07891339.1| lysine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479603|gb|EFU70280.1| lysine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 502

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 56/266 (21%), Positives = 108/266 (40%), Gaps = 7/266 (2%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D      ++G +   R  G   FL I D  G+ Q+    D+        +  + +    G
Sbjct: 53  DENRNYTVAGRIKFFRLMGKASFLKIEDESGMLQIYVARDNLPENFYNEIFKKNIEV--G 110

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++  S          G++ L A  ++IL+ A   PLP        + +R++ R+LDL  
Sbjct: 111 DIIEVSGYPFVTGH--GELSLHADSLKILTKAIS-PLPEKFHGIQDKELRYRQRYLDLIM 167

Query: 136 D-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           +  + K    R+++I+  R     + F+E  TP++   +        V      G    L
Sbjct: 168 NSEVRKTFHIRSKVISLTRRFFENKGFLEVETPMMHPIAGGANAKPFVTHFNALGVDRFL 227

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+  F+I   FR+E   +   P EF  ++   ++    D++   +
Sbjct: 228 RIAPELYLKRLIVGGFEAVFEINRNFRNEGMDATHNP-EFTSIEFYWAYKTYKDLIVLTK 286

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYD 280
                +FE  +    +     +I ++
Sbjct: 287 EYFEYLFENLNLPTILPYGEFKIDFN 312



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 49/157 (31%), Gaps = 27/157 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
              +  +  E   +        +I ++P               +P          L    
Sbjct: 358 GQLQGELFDEF--VEAKLINPTFITEYP------------VEISPLARRNDEKPHLTD-- 401

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS----NVGISKEVVENRFGGLYRAF 529
                  +++L   G EIA+     +     LQ F           +           A 
Sbjct: 402 -------RFELFIAGKEIANAFSELNDPIDQLQRFEGQIAAKEAGDDEAHEMDEDFVNAL 454

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             GM P  G   GIDR+VM+L    ++R+V LFP  +
Sbjct: 455 SYGMAPTAGQGIGIDRLVMMLTNEHSIRDVLLFPAMK 491


>gi|317059364|ref|ZP_07923849.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313685040|gb|EFS21875.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 461

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 130/376 (34%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
             + +   V+L  WV ++R      FL+I D       QVV +     F+    +     
Sbjct: 11  KETYIDKEVKLGAWVRKIRSQKNFGFLEINDGSFFNGIQVVFDTSLENFDEISRLSIASS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G ++              + E+ A K+E+   A+ L  P+  +R   E +R K   
Sbjct: 71  VIVEGTLVKSEGAG-------QEFEIKASKVEVCQKAD-LDYPLQNKRHSFEFLRTKS-H 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++      +NF+   TPI+T+S  EGA +    + ++   
Sbjct: 122 LRARTNTFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITSSDAEGAGEMFRITTLDLNN 181

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       + F   +   P FR E   + R   E
Sbjct: 182 VPKNEDGSINFQKDFFGKSTNLTVSGQLNGETYCAAFRNIYTFGPTFRAEYSNTARHASE 241

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ EM+F + +  ++  E +++ +            NF                   
Sbjct: 242 FWMIEPEMAFADLEVNMDIAEKMVKYIIRYVMETCPEEMNFFNQFIEKGLFDKLNNVLNN 301

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+   +   +EH  +     F K + +    +     
Sbjct: 302 DFGRLTYTEAIDILEKSGKKFEYPVKWGIDLQSEHERYLAEEHFKKPVFLVDYPKDI--- 358

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  ++NE
Sbjct: 359 -------KAFYMKLNE 367



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 57/147 (38%), Gaps = 26/147 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  +++D+P        K I      F M           D  +++A  
Sbjct: 336 HERYLAEEHFKKPVFLVDYP--------KDIKA----FYMK-------LNEDGKTVRAM- 375

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+     EI  G  R    E++    + +G+ K      +       + G  PH G  
Sbjct: 376 -DLLAPQIGEIIGGSQREDNLEILENRMNELGMDK----EDYSFYLDLRKYGSFPHSGYG 430

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G +R++M L G  N+R+V  FP + N
Sbjct: 431 LGFERMIMYLTGMANIRDVIPFPRTPN 457


>gi|170769276|ref|ZP_02903729.1| asparagine tRNA synthetase [Escherichia albertii TW07627]
 gi|170121928|gb|EDS90859.1| asparagine tRNA synthetase [Escherichia albertii TW07627]
          Length = 466

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 126/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +     Q E+ A  +E+    E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASPGQGQQFEIQASSVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +DI    E +L+ VF+                            +  +F ++
Sbjct: 252 PEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAISRLERFIEADFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVTILENCGKKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+ +    +G+ K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDERMLEMGLKK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|119475157|ref|ZP_01615510.1| asparaginyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119451360|gb|EAW32593.1| asparaginyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 465

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/387 (18%), Positives = 126/387 (32%), Gaps = 58/387 (14%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLCI 73
           S V + GWV   R    GI F+ I D      + A      D+   E+ ++     V  +
Sbjct: 18  SVVTVQGWVRSRRDSKAGISFMAIHDGSCFAAIQAVIPTTLDNYQSEVLQAGAGCSV-RV 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++++   +  N        E+ A  +E++   ++       ++ +          L  
Sbjct: 77  SGMLVTSEGKGQN-------FEIQATAVEVVGWVDDPETYPVAKKRHSFEYLRTIAHLRP 129

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ----- 188
           R +T       R  + NS+       +F   +TPI+TAS  EGA +    S ++      
Sbjct: 130 RTNTFGAVTRVRNVLANSIHNYFFDRDFQWVNTPIITASDCEGAGELFRVSSLDLTNLPR 189

Query: 189 ---------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+   +      Q           + +   P FR E+  + R   EF+ 
Sbjct: 190 GVDGGVDFTKDFFSDESFLTVSGQLNVEAFCMAMSKVYTFGPTFRAENSNTSRHLAEFWM 249

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NNFL 275
           ++ E++F + +D     E+ L+ +F    N                           NF 
Sbjct: 250 VEPEIAFADLNDDATLAEDFLKYLFNAVLNKCGDDIEFFTQFVDKTCHERLEKVSQQNFE 309

Query: 276 RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           RI Y +AIR         + P+   +   +EH          +     P   +       
Sbjct: 310 RIDYSEAIRILENAPRKFQFPVKWGLDLQSEHER-----FLCEEHIGAPTIVMNYPKEIK 364

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIF 360
               R   D     A     PG+  I 
Sbjct: 365 AFYMRMNDDNKTVAAMDVLAPGIGEII 391



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 27/146 (18%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +      +M++P     +E K        F M           D  ++ A  
Sbjct: 341 HERFLCEEHIGAPTIVMNYP-----KEIK-------AFYMRMND-------DNKTVAAM- 380

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            D++  G  EI  G  R    +V+    +   I                + G  PH G  
Sbjct: 381 -DVLAPGIGEIIGGSQREERLDVLDARMAEQNIG-----GDLWWYRDLRRYGTVPHAGFG 434

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G +R++  + G  N+R+V  +P + 
Sbjct: 435 LGFERLISYVTGLDNIRDVIPYPRTP 460


>gi|189425785|ref|YP_001952962.1| asparaginyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189422044|gb|ACD96442.1| asparaginyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 463

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 72/384 (18%), Positives = 133/384 (34%), Gaps = 49/384 (12%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
            RT     L   + G    ++GWV   R  G + F+ + D   ++ +    + A      
Sbjct: 3   KRTLIADLLKRPEAGGTHTVAGWVRSTRASGDVAFIVLNDGSNLSGIQLVLERATVPDFD 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++         G  +  + E + +     Q EL    + ++  A+    P+  +R   E 
Sbjct: 63  NLSK----TGTGTALQATGELVTSPAAGQQFELRVTALTVVGNADPDY-PLQKKRHSFEY 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R     L  R +T       R+++  ++       NF+   TPI+TAS  EGA +    
Sbjct: 118 LR-SIAHLRPRSNTFGAVFRLRSKLAQAIHQFFSERNFLYVHTPIITASDCEGAGELFRV 176

Query: 184 SRVNQG--------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           + +                  F+          Q +  L A  F   +   P FR E+  
Sbjct: 177 TTLPPNGAPRNEGGSIDFGQDFFGQKTGLTVSGQLEGELFAQAFGNIYTFGPTFRAENSN 236

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV--------FEEFSNGNTV-------- 270
           + R   EF+ ++ EM+F +  D  +  E  +R +         E+ +  +          
Sbjct: 237 TARHASEFWMIEPEMAFSDLADDADLAEEFVRYLCSFALRECAEDMAFFDQHIEKGLIQR 296

Query: 271 -----SNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK---ILSV 320
                  NF R+ Y DAI            P+   +   TEH  +   +V      +L+ 
Sbjct: 297 VRAVAEANFARMDYGDAITHLQKAPVSFNFPVEWGLDLQTEHERYLTEQVVGGPVFVLNY 356

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRM 344
               + + +     G   A  D +
Sbjct: 357 PKDIKAFYMRQNNDGRTVAAMDLL 380



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 73/220 (33%), Gaps = 16/220 (7%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG------DPLKFCSFA 413
           FW ++     + +   A              L     D  FF           ++  + A
Sbjct: 244 FWMIEPEMAFSDLADDADLAEEFVRYLCSFALRECAEDMAFFDQHIEKGLIQRVRAVAEA 303

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID---FAHNPFTMPQGGMES-- 468
             AR      +  +      F + +++      E E+ +         F +         
Sbjct: 304 NFARMDYGDAITHLQKAPVSFNFPVEWGLDLQTEHERYLTEQVVGGPVFVLNYPKDIKAF 363

Query: 469 -LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
            ++ N+     A    LV    EI  G  R    +++ Q    + I KE +         
Sbjct: 364 YMRQNNDGRTVAAMDLLVPKVGEIIGGSQREERLDLLEQRIDELEIPKEPLW----WYLD 419

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + + G  PH G   G +R++M L G +N+R+V  FP +  
Sbjct: 420 SRRWGSTPHAGFGLGFERLIMYLSGMENIRDVIPFPRTPR 459


>gi|330718585|ref|ZP_08313185.1| asparaginyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 435

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 72/307 (23%), Positives = 121/307 (39%), Gaps = 32/307 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCI 73
           V   VR+  W+ + R  G I FL +RD         V ++     FEIAKS++ E  + +
Sbjct: 17  VNQTVRIGVWLRQKRGSGKIAFLQLRDGTAFFQGVVVKSDVSEETFEIAKSLKQETSMYV 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +             E++   IEI+  + + P+     +E+       +R L L
Sbjct: 77  TGEIHEDTRSDF-------GYEMAISGIEIVGESHDYPITP---KEHGVDFLMDHRHLYL 126

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +I +       E F +  +PILT S+PEG  +        + ++  
Sbjct: 127 RHLKPFATLKIRNELIRATYEFFNKEGFTKLDSPILTGSAPEGTTELFETDYFGESAY-- 184

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM+F  Q++ L   
Sbjct: 185 LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAFTTQEESLEVQ 243

Query: 254 ENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           E  +  + E     N                     + R+ YDDAI+    +  D+   +
Sbjct: 244 ERYISYLIESVLKNNEQELDILGRDKEVLRSYTQLPYPRLSYDDAIQLLQDNGFDVEWGV 303

Query: 298 IMHNVTE 304
              +  E
Sbjct: 304 DFGSPEE 310



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 22/133 (16%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +I++FP     +E K      +P        + +   DLL+ + +         EI 
Sbjct: 319 KPVFIVNFP-----KEIKAFYMKRHPT-----RDDVVISADLLAPEGYG--------EII 360

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R+   E +       G+     +          Q G  PH G   G++R++  + G
Sbjct: 361 GGSERDTDYEYLKTRIEEQGLDLAEYQ----WYLDLRQYGTVPHSGFGLGLERMITFVTG 416

Query: 553 AKNVREVSLFPMS 565
            +++RE   FP  
Sbjct: 417 EEHIREAIPFPRM 429


>gi|302336409|ref|YP_003801616.1| lysyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301320249|gb|ADK68736.1| lysyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 697

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 72/390 (18%), Positives = 136/390 (34%), Gaps = 38/390 (9%)

Query: 6   THSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           T    +L          +D      L+G +   R  G   FL I D  G  Q+    ++ 
Sbjct: 41  TAHAAELAERYASLEDGADTTDEYSLAGRIRAYRRQGKARFLVIEDVSGEIQLFCRVNNL 100

Query: 58  CFE---IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
             E   +   +    ++   G V+             GQ+ +S   + +LS +   PLP 
Sbjct: 101 SAEDWGLLGQLDLGDIIQARGTVLRTRR---------GQLSVSPTSVTLLSKSVR-PLPE 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS- 172
                    +R++ R++DL  +   ++  + R+ I++ +R  M ++ +IE  TP++ A  
Sbjct: 151 KFHGLTDRELRYRQRYVDLIMNRDVRDTFRMRSAIVSQIRRYMESDGYIEVETPMMHAIL 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+        +FY L  A +   + L+  G +R F+I   FR+E       P 
Sbjct: 211 GGANARPFVTHFNALDRNFY-LRIATELPLKRLIVGGMERVFEIGRQFRNEGMDLTHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  ++   ++ +   + +    + + +  E                      Y   + D
Sbjct: 269 EFTSMEAYCAYSDLQGMKDLTMGLFKAIAREACGCEEG----------HEAIVYQGQEID 318

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
           L        V E          +    ++   E+ A  +     N      + E     G
Sbjct: 319 LSGTWRSATVAEIASEVCGEELTIDTPLDHLRELCAAHSIEWRENWGAGKLLFELYDELG 378

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
           +  L    +  D    V    P+AK  +  
Sbjct: 379 EETLVNPTFVCDYPEEV---SPLAKRKDDD 405



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 66/197 (33%), Gaps = 20/197 (10%)

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
               +    + G+ L   +     R     EL   +   +   W      +E  +E  + 
Sbjct: 326 ATVAEIASEVCGEELTIDTPLDHLR-----ELCAAHSIEWRENWGAGKLLFELYDELGEE 380

Query: 453 DFAHNPFTMPQGGMESLKGN--DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML----Q 506
              +  F        S      D       +++LV  G E A+     +          +
Sbjct: 381 TLVNPTFVCDYPEEVSPLAKRKDDDPCITDRFELVIAGHEYANAFSELNDPVDQAGRFAE 440

Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             +  G   +          RA + GMPP GGI  GIDR+VML      +R+V LFP  +
Sbjct: 441 QVAAKGFGDDEAMGYDYDYVRALEYGMPPAGGIGFGIDRMVMLFCDQPAIRDVLLFPQMK 500

Query: 567 NFCDLLMGSPSTVSVEQ 583
                    P  V+ EQ
Sbjct: 501 ---------PEAVTREQ 508


>gi|301761808|ref|XP_002916322.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           [Ailuropoda melanoleuca]
 gi|281341070|gb|EFB16654.1| hypothetical protein PANDA_004385 [Ailuropoda melanoleuca]
          Length = 477

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 61/250 (24%), Positives = 111/250 (44%), Gaps = 18/250 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V++ GW+  VR    ++FL I D   +  +    DS+    ++ +     + + G +
Sbjct: 41  GERVKVQGWIRSVRSQKDVLFLHINDGSALESLQVVADSSF--DSRELAFGSSVEVQGQL 98

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +   ++  N       +EL A+KIE++   +    P   +  +P     +Y  L  R +T
Sbjct: 99  VKSPSKKQN-------VELKAEKIEVVGNCDAKAFPFKYKERHPLEYLRQYPHLRCRTNT 151

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-----RVNQGSFY 192
           L   +  R+    ++        F+   TPI+T++  EGA +          +V + +F+
Sbjct: 152 LGSILRVRSEATAAIHSFFKDSGFVHIHTPIITSNDCEGAGELFQVEPSSKIKVPEENFF 211

Query: 193 ---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
              A      Q    +M+  F R F   P FR E+ +S R   EFY ++ E+SFVE   D
Sbjct: 212 NVPAFLTVSGQLHLEVMSGAFTRVFTFGPTFRAENSQSRRHLAEFYMVEAEISFVESLQD 271

Query: 249 ILNTMENVLR 258
           ++  ME + +
Sbjct: 272 LMQVMEGLFK 281



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 55/153 (35%), Gaps = 25/153 (16%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            H   E  ++        +++++P             A  PF M                
Sbjct: 347 LHTEHEKYLVKHCGNIPVFVINYPL------------ALKPFYMRDNED------GPQHT 388

Query: 478 KAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
            A   DL+  G  E+  G +R      + Q  + +G+++      +       + G  PH
Sbjct: 389 VA-AVDLLVPGVGELFGGSLREERYHFLEQRLARLGLTEA-----YQWYLDLRRFGSVPH 442

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           GG   G +R +  +LG  N+++V  FP   + C
Sbjct: 443 GGFGMGFERYLQCILGIDNIKDVIPFPRFTHSC 475


>gi|162448223|ref|YP_001621355.1| lysyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|161986330|gb|ABX81979.1| lysyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 495

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 67/313 (21%), Positives = 118/313 (37%), Gaps = 22/313 (7%)

Query: 2   HRY-RTHSCGDL--------GVSDVGSFV--RLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           HR+ RTH   ++                V   ++G +   R  G   F+ ++D  G  QV
Sbjct: 30  HRFDRTHLSNEIHTTYGSLTREELEAKEVHVIIAGRIVLRRTQGKAGFIQLQDKEGRIQV 89

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D+      +  +   +  I G+      + +     T ++ + A +   L+ A   
Sbjct: 90  YVRLDAVGEFQFELFKHSDLGDIVGI------KGVLFRTKTDELTVKASEFVHLTKAIT- 142

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP        +    + R++DL  +    +    R RII + +    +  FIE  TP+L
Sbjct: 143 PLPDKFHGLQDKEEARRRRYVDLIVNEDSMRVARTRPRIIRAFQHYFDSNGFIEVETPVL 202

Query: 170 TAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   AR F+         FY L  A +   + L+  G +R ++I   FR+E   + 
Sbjct: 203 HPILGGAAARPFVTHHNTLDMDFY-LRIATELPLKRLIVGGMERVYEIGRLFRNEGISAK 261

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  ++   +F +  D++  +E+ L  V  E +    V  N   I   D  R +  
Sbjct: 262 HNP-EFTTVEAYQAFGDVTDMMKLVEDCLSSVAFEVNGSYDVVFNDQTIHLKDFKRAHMV 320

Query: 289 DKPDLRNPIIMHN 301
           D    +      N
Sbjct: 321 DLIKEQTGEDFFN 333



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 69/186 (37%), Gaps = 7/186 (3%)

Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFP 441
             T  ++        D      G+   F  ++ +    IA++  +     F    I++  
Sbjct: 306 DQTIHLKDFKRAHMVDLIKEQTGEDF-FNQYSLEEAKQIAKKHNVQVEPHFTVGHIIEA- 363

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +  +  EK I      F  P       K ND       +++L   G E A+     +  
Sbjct: 364 -FFNDYVEKTIIQPTIVFGHPVEISPLAKSNDKDPRFTDRFELFIMGSEYANAFSELNDP 422

Query: 502 EVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F +    KE  ++           A + GMPP GGI  GIDR +MLL    N+R
Sbjct: 423 VDQKNRFLDQLKQKEKGDDEASEMDIDFVEALEYGMPPTGGIGIGIDRFIMLLTNTPNIR 482

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 483 DVILFP 488


>gi|237707081|ref|ZP_04537562.1| AsnS [Escherichia sp. 3_2_53FAA]
 gi|331641457|ref|ZP_08342592.1| asparagine--tRNA ligase [Escherichia coli H736]
 gi|331672464|ref|ZP_08373254.1| asparagine--tRNA ligase [Escherichia coli TA280]
 gi|331676719|ref|ZP_08377415.1| asparagine--tRNA ligase [Escherichia coli H591]
 gi|332279891|ref|ZP_08392304.1| asparaginyl-tRNA synthetase [Shigella sp. D9]
 gi|115512272|gb|ABJ00347.1| AsnS [Escherichia coli APEC O1]
 gi|226898291|gb|EEH84550.1| AsnS [Escherichia sp. 3_2_53FAA]
 gi|331038255|gb|EGI10475.1| asparagine--tRNA ligase [Escherichia coli H736]
 gi|331070370|gb|EGI41735.1| asparagine--tRNA ligase [Escherichia coli TA280]
 gi|331075408|gb|EGI46706.1| asparagine--tRNA ligase [Escherichia coli H591]
 gi|332102243|gb|EGJ05589.1| asparaginyl-tRNA synthetase [Shigella sp. D9]
          Length = 481

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 127/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 31  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 86

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +     Q E+ A K+E+    E+        + +      +   L  R 
Sbjct: 87  CSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 146

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++  +     
Sbjct: 147 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 206

Query: 196 QA-----------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           Q                    Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 207 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 266

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +DI    E +L+ VF+                            +  +F ++
Sbjct: 267 PEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQV 326

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 327 DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 381

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 382 YMRLNEDGKTVAAMDVLAPGIGEII 406



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+ +    +G++K      +      
Sbjct: 385 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNK----EDYWWYRDL 438

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 439 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 477


>gi|23336627|ref|ZP_00121835.1| COG1190: Lysyl-tRNA synthetase (class II) [Bifidobacterium longum
           DJO10A]
          Length = 414

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 97/508 (19%), Positives = 175/508 (34%), Gaps = 115/508 (22%)

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S++    L   G  +      I +   TG++ + A +  I S A +    +   ++  
Sbjct: 9   ADSLKQFKQLVDLGDHLYLKGRVIASK--TGELSVFATEWAIASKALQPLPAL--HKDLN 64

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           E  R +  ++ +  D   +N+V+ R++ + S+R      +F+E  TP+L        AR 
Sbjct: 65  EDTRTRKPYIGMIADENIRNMVRNRSKAVASLRRTFDDHDFLEVETPMLQTLHGGAAARP 124

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F           Y L  AP+ + +  +  G DR F+I   FR+E   +   P EF  ++ 
Sbjct: 125 FTTHMNAFDLDLY-LRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAP-EFTMVEA 182

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++   D I   ++ +++                       A+  YG+ K      + +
Sbjct: 183 YQAYGTYDSIGQLVKELVQK---------------------TAMDVYGSHK------VTL 215

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
            + TE+    E++  S   S++       +P  G                    PG    
Sbjct: 216 LDGTEYDFGGEWKTISMYDSLSESLGEEIVPNGGPD-----------------APGT--- 255

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
                   +V  +G +A  L +        R D+++                       H
Sbjct: 256 --------SVEHLGAIADKLGVE-------RDDVENH-----------------GKLVEH 283

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +         +E  ++ DFP      E   +   H                       
Sbjct: 284 LWEHF--YEDKLYEPTFVRDFPV-----ETSPLVKGHR----------------TKPGVV 320

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPP 535
            ++DL   GFE+A+G    +   V  + F          +            A   GMPP
Sbjct: 321 EKWDLYVRGFELATGYSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPP 380

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG+  GIDR+++ L GA  +RE   FP
Sbjct: 381 AGGMGMGIDRLLIALTGA-TIRETITFP 407


>gi|160901648|ref|YP_001567229.1| lysyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160359292|gb|ABX30906.1| lysyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 502

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/283 (22%), Positives = 120/283 (42%), Gaps = 11/283 (3%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G +  +R HG   F D++D +G  QV    D    E     +    +   G  +      
Sbjct: 58  GRLMNLRKHGKSAFADLKDEFGRIQVYIRLDQVGQENYDFFKEYIDI---GDWIGIKG-- 112

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIV 143
                 TG++ L A  IE+LS A   PLP        + +R++ R++D+   D   K + 
Sbjct: 113 YPFKTRTGELTLLALDIELLSKAIR-PLPEKWHGLKDKEVRYRQRYVDMIANDDTIKTLR 171

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYK 202
            R  II  +R  +  + F+E  TP+L +      AR F+    V     Y L  A + + 
Sbjct: 172 TRFLIIKYIREYLNNKGFLEVETPVLQSIMGGANARPFITHLNVYDIDMY-LRIATELHL 230

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + L+  G ++ ++I   FR+E   +   P EF  +++  +F + +D++   E++L  + +
Sbjct: 231 KRLVVGGMEKVYEIGKIFRNEGVSNKHNP-EFTSIELYQAFADYNDMMELTEDLLYNITK 289

Query: 263 EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN-PIIMHNVTE 304
           +  N   +      I +    +R    +    N  I +   ++
Sbjct: 290 KVHNKAKIMYQGEEIDFTPPFKRIKMREFIQENLGIDIVEASD 332



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 74/220 (33%), Gaps = 34/220 (15%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGDPLKFCSFAA 414
           L  I  ++     +   G             +R  +    G D       +  +F     
Sbjct: 284 LYNITKKVHNKAKIMYQGEEIDFTPPFKRIKMREFIQENLGIDIVEASDQELKEFLKNKG 343

Query: 415 DARNHIAQEL-------GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
           +    I            ++     +  ++MD+P  E +   K+                
Sbjct: 344 E-EVEIEDRYHYLDKVWDLVEDKIVQPTFVMDYPI-ELSPLAKR---------------- 385

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG---- 523
             K +D       +++L+  G EIA+     +  +   + F      KE+ +        
Sbjct: 386 --KKDDPR--LTERFELIIKGNEIANAFSELNDPQDQFERFKKQMELKELGDEEAQMMDL 441

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              RA + G+PP GG+  GIDR+ MLL     +R++  FP
Sbjct: 442 DFIRALEYGLPPTGGLGIGIDRVCMLLTDTPTIRDIIPFP 481


>gi|238919270|ref|YP_002932785.1| asparaginyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|238868839|gb|ACR68550.1| asparaginyl-tRNA synthetase, putative [Edwardsiella ictaluri
           93-146]
          Length = 466

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 74/426 (17%), Positives = 141/426 (33%), Gaps = 62/426 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V + V + GWV   R    GI FL + D      + A  +++       V    +    G
Sbjct: 16  VDTEVTVRGWVRTRRDSKAGISFLAVYDGSCFNPLQAVVNNSLPNYESEV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  S   + +       EL A  I+++   ++        + +      +   L  R 
Sbjct: 72  CSLEVSGRVVASPGEGQSFELQATAIKVVGWVDDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++        +   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQAIHRYFNENGYFWVSTPLITASDTEGAGEMFRVSTLDMENLPRND 191

Query: 189 -------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 AGKVDYSEDFFGREAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + +DI    E +L+ VF                             VS++F ++
Sbjct: 252 PEVAFADLNDIAGVAEGMLKYVFNAVLEERADDMAFFAQRVDKDAIDRLQRFVSSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI    +      NP+    ++ +EH  +   + F   + V    +          
Sbjct: 312 DYTDAITILESCGKQFENPVFWGVDLSSEHERYLAEQHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             R   D     A     PG+  I   +  S     +  + K L+          + ++ 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEI---IGGSQREERLDMLDKRLDE---------MGLKK 414

Query: 396 GDSCFF 401
            D  ++
Sbjct: 415 EDYWWY 420



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +++ +    +G+ K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDMLDKRLDEMGLKK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+V  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHAGFGLGFERLVAYVTGVQNVRDVIPFPRTPR 462


>gi|78777471|ref|YP_393786.1| lysyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78498011|gb|ABB44551.1| Lysyl-tRNA synthetase, class-2 [Sulfurimonas denitrificans DSM
           1251]
          Length = 504

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 55/245 (22%), Positives = 100/245 (40%), Gaps = 7/245 (2%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            LSG +   R  G   F+ I D   + QV    D    E       + +    G ++  S
Sbjct: 60  TLSGRIKLFRIMGKASFIQIEDESNVLQVYVARDHIGEEFYNETFKKNI--ETGDIVEVS 117

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
                     G++ L A  +++L+ A   PLP        +  R++ R+LDL  +  + K
Sbjct: 118 G--YPFVTGQGELSLHADNLKLLTKAIS-PLPEKFHGITDKETRYRKRYLDLIMNADVRK 174

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
               R+++I+  R     + F+E  TP++   +        V      G    L  AP+ 
Sbjct: 175 TFKVRSKVISLTRRFFEDKGFLEVETPMMHPIAGGANAKPFVTHHNALGIDRYLRIAPEL 234

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF+  F+I   FR+E   +   P EF  ++   ++    D++   +   R +
Sbjct: 235 YLKRLIVGGFEAVFEINRNFRNEGMDATHNP-EFTSIEFYWAYKTYKDLIEITKEYFRYL 293

Query: 261 FEEFS 265
           F+  +
Sbjct: 294 FDHLN 298



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 62/192 (32%), Gaps = 38/192 (19%)

Query: 398 SCFFIAGDPLKFCS--FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
              F+    ++  +       +  +  E   +        +I ++P  E +   ++    
Sbjct: 341 IILFLKEKNIQVKNNLSLGQLQGELFDEF--VEDKLINPTFITEYPV-EISPLARR---- 393

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
                           +D       +++L   G EIA+     +        F     SK
Sbjct: 394 ----------------SDKNPEVTERFELFIAGREIANAFSELNDPVDQYNRFKTQVESK 437

Query: 516 EVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           E  ++           A   GM P  G   GIDR+VMLL    ++R+V LFP  +     
Sbjct: 438 ESGDDEAHAMDLDFVEALSYGMAPTAGQGIGIDRLVMLLTNEHSIRDVLLFPAMK----- 492

Query: 572 LMGSPSTVSVEQ 583
               P     +Q
Sbjct: 493 ----PIHTDEKQ 500


>gi|301769781|ref|XP_002920308.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like
           [Ailuropoda melanoleuca]
          Length = 559

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/344 (20%), Positives = 127/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + + G+
Sbjct: 136 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLSDDLCQCYNGVVLATESSVAVYGM 195

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 196 LNLTPEG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 251

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ +    R       + E + P L  +  EG           + +F  L Q
Sbjct: 252 NMSKILKARSVVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 309

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  +++LN +E++
Sbjct: 310 SSQLYLETCIP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFEELLNRLEDL 368

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 369 VCDVVDRVLKSPAASIVRDLNPNFKPPKRPFKRMNYSDAIVWLKEHDIKKEDG-TFYEFG 427

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 428 EDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDSRLTE 471



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   SE +L  +   GI        +       + G  PHGG   G+
Sbjct: 476 LMPNVGEIVGGSMRIWDSEEILAGYKREGIDPTP----YYWYTDQRKYGTCPHGGYGLGL 531

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R +  +L   ++R+V L+P     C  
Sbjct: 532 ERFLTWILNRYHIRDVCLYPRFVQRCKP 559


>gi|221132051|ref|XP_002158421.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 568

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/341 (18%), Positives = 126/341 (36%), Gaps = 19/341 (5%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFE-----IAKSVRSEWVLC 72
             V ++G +H  R  G  +IF D+R      Q++A+  +   E     I   +R   ++ 
Sbjct: 106 EKVSVAGRIHAKRISGPKLIFYDLRGEGVKIQIMADHKNKSSEQDFAAIHGKLRRGDIVG 165

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G    R  ++       G++ +    IE+LS      LP        +  RF+ R+LD
Sbjct: 166 VTG----RPGKS-----KKGELSIQPTNIELLSPCL-HMLPHLHFGLKDKETRFRQRYLD 215

Query: 133 LRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           +  +   +     R+RIIN +R  +    F+E  TP++            +    +    
Sbjct: 216 IILNEQVRQKFYTRSRIINYVRKYLDQLGFLEIETPMMNMIPGGATAKPFITHHNDLNMD 275

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++ 
Sbjct: 276 LFLRVAPELYHKMLVVGGIDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYMAYADYNDVIE 334

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E +L G+ +       +  +  R    +         P  R   ++  + +    +  
Sbjct: 335 ITEKMLSGMVKSLFGTYKLKYHPERTDEAEGEEWEIDFTPPFRRISMLAELQKVLNVTFP 394

Query: 312 RVFSKILSVNPGYEVWAIPAK-GGGGNRAFCDRMNEWARSQ 351
                       ++   I         R     +++     
Sbjct: 395 NFDLNTEEARKYFDDLCIKNGVECSPPRTVSRLLDKLVGDY 435



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 4/95 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQC 531
                +++L     EI +     +   +  Q F+N    K   ++           A + 
Sbjct: 464 PGLTERFELFVCRKEICNAYTELNDPYIQRQMFTNQAKDKAAGDDESMFYDEGFCTALEY 523

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP  G   GIDR+ M    + N++EV  FP  +
Sbjct: 524 GLPPTAGWGMGIDRLCMFFTDSNNIKEVLFFPAMK 558


>gi|300814563|ref|ZP_07094817.1| asparagine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511331|gb|EFK38577.1| asparagine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 461

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/375 (17%), Positives = 125/375 (33%), Gaps = 51/375 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIAKSVRSEWV 70
             + +   + + GW+   R      F+++ D      +      +   F   +       
Sbjct: 11  TENYIDKEIEICGWIKTNRGSKNFGFIELTDGTNFNSLQVVYGKELGNFSEIEKYTLSSS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L I G ++                EL A++I+++  A+    P+  +R   E +R     
Sbjct: 71  LIIKGKLVESPG-------ANQSFELQAKEIKLIGAAD-NTYPLQKKRHTMEYLRTVS-H 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +T +     R+ I  ++        F+    PI+TAS  EGA +    + +    
Sbjct: 122 LRPRTNTFNAVFRVRSLIAYAIHKFFQERGFVYFHAPIITASDAEGAGEMFQVTTLPLED 181

Query: 191 FYALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                +    YK+                    A  F   +   P FR E+  + R   E
Sbjct: 182 IPKNDEGKVDYKKDFFGKETNLTVSGQLEDEAFALAFGNVYTFGPTFRAENSNTPRHAAE 241

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSN 272
           F+ ++ EM+F + +  ++  E +L+ +                            N VSN
Sbjct: 242 FWMIEPEMAFADLNVNMDVAEAMLKYIIRYVLENAKEEMKFFNKFIDKDLLARLDNVVSN 301

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
            F RI Y  AI        + + P+   +   TEH  +    VF K + V    +     
Sbjct: 302 EFERITYTQAIEILEKANKEFKFPVKWGIDLQTEHERYITEEVFKKPVFVTNYPKEIKAF 361

Query: 331 AKGGGGNRAFCDRMN 345
                 ++     M+
Sbjct: 362 YMTENDDKKTVAAMD 376



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 53/141 (37%), Gaps = 27/141 (19%)

Query: 427 INCNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           I    F+   ++ ++P     +E K        F M +                   DL+
Sbjct: 340 ITEEVFKKPVFVTNYP-----KEIK-------AFYMTENDD---------KKTVAAMDLL 378

Query: 486 CNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
             G  EI  G  R H  E++ +   ++ ++     + +       + G   H G   G +
Sbjct: 379 VPGVGEIIGGSQREHRIEILEKKMKDLNMNM----DEYDWYLDLRRFGTCIHSGYGLGFE 434

Query: 545 RIVMLLLGAKNVREVSLFPMS 565
           R VM + G KN+R+V  FP +
Sbjct: 435 RAVMYITGMKNIRDVIPFPRT 455


>gi|281201920|gb|EFA76128.1| lysine-tRNA ligase [Polysphondylium pallidum PN500]
          Length = 539

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 10/261 (3%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           S+    + ++G V   R +G  + F DI      TQ+  N  +       SV     L  
Sbjct: 65  SNAQPEISIAGRVLSKRLNGKHLAFYDIVQDGVKTQLFVNRGNMG----DSVDQINDLLR 120

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++   A+       TGQ+ L   ++ +LS      LP  G+    +  RF+ R+LD+
Sbjct: 121 RGDIV--GAKGRPGRAKTGQLSLFTTEVVLLSPCL-HMLPKPGQGLTDQETRFRQRYLDM 177

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
              + + +N V R+++I  +R  +    F+E  TP++   +   A    V          
Sbjct: 178 IVNNNVKRNFVIRSKVIQGVRRYLDNLGFVEVETPMMNMIAGGAAAKPFVTHHNCLNLNL 237

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ Y + L+  G DR ++I   FR+ED      P EF   +  M++ + +D++  
Sbjct: 238 FMRIAPELYLKQLVVGGMDRVYEIGKQFRNEDIDHTHNP-EFTTCEFYMAYADYNDLMTI 296

Query: 253 MENVLRGVFEEFSNGNTVSNN 273
            E +L  + E+      +  +
Sbjct: 297 TEEMLARIVEDIHGSKKIKYH 317



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 6/114 (5%)

Query: 459 FTMPQGGMESLKGNDLLSI--KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F +    + S       +I     +++L  N  E  +     +     L  F     +K 
Sbjct: 401 FIINHPEIMSPLAKHHRTIPGLTERFELFINTREACNAYTELNNPFTQLDRFEEQAKAKA 460

Query: 517 VVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + ++           + + G+PP GG   G+DR VMLL    N++EV LFP  +
Sbjct: 461 MGDDEAQLIDNVFTTSLEYGLPPTGGWGLGVDRFVMLLCDVYNIKEVILFPAMK 514


>gi|6320242|ref|NP_010322.1| Krs1p [Saccharomyces cerevisiae S288c]
 gi|135139|sp|P15180|SYKC_YEAST RecName: Full=Lysyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|171799|gb|AAA66916.1| lysyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|1122359|emb|CAA92376.1| Krs1p [Saccharomyces cerevisiae]
 gi|1431484|emb|CAA98863.1| KRS1 [Saccharomyces cerevisiae]
 gi|190404990|gb|EDV08257.1| lysine-tRNA ligase [Saccharomyces cerevisiae RM11-1a]
 gi|207346823|gb|EDZ73202.1| YDR037Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|259145284|emb|CAY78548.1| Krs1p [Saccharomyces cerevisiae EC1118]
 gi|285811061|tpg|DAA11885.1| TPA: Krs1p [Saccharomyces cerevisiae S288c]
          Length = 591

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 106/263 (40%), Gaps = 15/263 (5%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIAKS----VRSEWVLC 72
             V ++G +H  R  G  + F  +  D   +  +    D    +  +     ++   ++ 
Sbjct: 122 EKVSIAGRIHAKRESGSKLKFYVLHGDGVEVQLMSQLQDYCDPDSYEKDHDLLKRGDIVG 181

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           ++G V      T       G++ +   ++++L+      LP        +  R++ R+LD
Sbjct: 182 VEGYV----GRTQPKKGGEGEVSVFVSRVQLLTPCL-HMLPADHFGFKDQETRYRKRYLD 236

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +       + R+ II  +R  +    FIE  TP++   +    A+ F+         
Sbjct: 237 LIMNKDARNRFITRSEIIRYIRRFLDQRKFIEVETPMMNVIAGGATAKPFITHHNDLDMD 296

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ + + L+  G DR ++I   FR+E       P EF   +   ++ +  D++
Sbjct: 297 MY-MRIAPELFLKQLVVGGLDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLM 354

Query: 251 NTMENVLRGVFEEFSNGNTVSNN 273
           +  E +   + +E +    +  +
Sbjct: 355 DMTELMFSEMVKEITGSYIIKYH 377



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 4/121 (3%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E E         F  PQ      K +        ++++     EI +     +       
Sbjct: 454 ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTELNDPFDQRA 513

Query: 507 AFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F      K+  ++           A + G+PP GG   GIDR+ M L  +  +REV LF
Sbjct: 514 RFEEQARQKDQGDDEAQLVDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLF 573

Query: 563 P 563
           P
Sbjct: 574 P 574


>gi|323309512|gb|EGA62723.1| Krs1p [Saccharomyces cerevisiae FostersO]
          Length = 591

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 106/263 (40%), Gaps = 15/263 (5%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIAKS----VRSEWVLC 72
             V ++G +H  R  G  + F  +  D   +  +    D    +  +     ++   ++ 
Sbjct: 122 EKVSIAGRIHAKRESGSKLKFYVLHGDGVEVQLMSQLQDYCDPDSYEKDHDLLKRGDIVG 181

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           ++G V      T       G++ +   ++++L+      LP        +  R++ R+LD
Sbjct: 182 VEGYV----GRTQPKKGGEGEVSVFVSRVQLLTPCL-HMLPADHFGFKDQETRYRKRYLD 236

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +       + R+ II  +R  +    FIE  TP++   +    A+ F+         
Sbjct: 237 LIMNKDARNRFITRSEIIRYIRRFLDQRKFIEVETPMMNVIAGGATAKPFITHHNDLDMD 296

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ + + L+  G DR ++I   FR+E       P EF   +   ++ +  D++
Sbjct: 297 MY-MRIAPELFLKQLVVGGLDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLM 354

Query: 251 NTMENVLRGVFEEFSNGNTVSNN 273
           +  E +   + +E +    +  +
Sbjct: 355 DMTELMFSEMVKEITGSYIIKYH 377



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 4/121 (3%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E E         F  PQ      K +        ++++     EI +     +       
Sbjct: 454 ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTELNDPFDQRA 513

Query: 507 AFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F      K+  ++           A + G+PP GG   GIDR+ M L  +  +REV LF
Sbjct: 514 RFEEQARQKDQGDDEAQLVDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLF 573

Query: 563 P 563
           P
Sbjct: 574 P 574


>gi|152969518|ref|YP_001334627.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238893987|ref|YP_002918721.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|262040970|ref|ZP_06014192.1| asparagine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330013883|ref|ZP_08307823.1| asparagine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|166231668|sp|A6T726|SYN_KLEP7 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|150954367|gb|ABR76397.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238546303|dbj|BAH62654.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259041664|gb|EEW42713.1| asparagine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328533315|gb|EGF60063.1| asparagine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 466

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 120/385 (31%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    G  FL + D      V A  +++     + V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGFSFLAVYDGSCFDPVQAVINNSLPNYNQEV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A  +E+    E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASQGQGQSFEIQATSVEVTGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++  +     
Sbjct: 132 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 196 QA-----------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           Q                    Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--------------LRICYDDAIR 284
            E++F   +D+    E +L+ VF+           F                I  D A  
Sbjct: 252 PEVAFANLNDVAGLAEAMLKYVFKAVLEERADDMQFFAERVDKDAIDRLQRFITADFAQV 311

Query: 285 RY-------GTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y               NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVTILENCGKQFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|256080760|ref|XP_002576645.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238661922|emb|CAZ32882.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 375

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 63/266 (23%), Positives = 114/266 (42%), Gaps = 20/266 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVVANPDSACFE---IAKSVRSE 68
             S++   V + G +HR R  G + F  +R   Y I  V++  +    E      S+  E
Sbjct: 79  NESNINQNVWVRGRLHRSRMKGKLCFFILRLQDYRIQNVLSVGEQTPKEMLAFVSSISKE 138

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--------EELPLPVFGERE- 119
            ++ + G V+         N  T  IE+  +K+ ++S A        E+   P   E   
Sbjct: 139 SIIDVFGRVLKSPVLIEGCNPDT--IEIHCEKVFVVSAALPTLPLQIEDAMRPDDDETTL 196

Query: 120 --YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               +  R   R +DLR             ++      +    F+   TP + +++ EG 
Sbjct: 197 SRVNQDTRLDNRCIDLRTPVNQAIYRIEAGVVKFFMEYLTNAGFVNIHTPKMISAASEGG 256

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +    S  +  ++ A  Q+PQ YKQ+ +A+ F+R F I   FR ED  + R   EF  L
Sbjct: 257 ANVFRVSYFSGSAYLA--QSPQLYKQMAIAADFERVFTIGSVFRAEDSNTHRHLTEFVGL 314

Query: 238 DMEMSFVEQ-DDILNTMENVLRGVFE 262
           D+EM+F     ++++ + ++   +F+
Sbjct: 315 DIEMAFKNHYHEVVDLIADMFVHMFK 340


>gi|66523683|ref|XP_393437.2| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic [Apis mellifera]
          Length = 533

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 65/316 (20%), Positives = 121/316 (38%), Gaps = 24/316 (7%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKS 64
             DL  +     V L G +H  R  G   F+ +R       G+  V         +   +
Sbjct: 78  IKDLNPNLENQNVWLRGRLHTSRAKGKQCFIVLRQQSYTIQGLAAVNNKVSKQMIKFISN 137

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER------ 118
           +  E ++ I+ +V   S++  +       +E+  +K  ++S A+        +       
Sbjct: 138 ITKESIVDIEAIVKCVSSQIESCTQK--DVEIHIEKAFVISSAKPQLPLQIEDASRPIKE 195

Query: 119 ---------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                    +  +  R   R LDLR             I    R  +  + F+E  TP +
Sbjct: 196 EVDDNILNIKVNQDTRLDNRVLDLRTPANQAIYRVEAAICKLFRDILTNKGFVEIHTPKI 255

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
            +++ EG  +    S     ++ A  Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R
Sbjct: 256 ISAASEGGANVFTVSYFKGNAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHR 313

Query: 230 LPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
              EF  LD+EM+F     +++ T+  +   +F+   N        +R  Y+    ++  
Sbjct: 314 HLTEFVGLDLEMAFKYHYHEVVETIGQLFVEIFKGLRNNYAAEIEAVRQQYNVEPFKFLD 373

Query: 289 DKPDLRNPIIMHNVTE 304
               L     +  + E
Sbjct: 374 PPLKLEYNDAIELLAE 389



 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 53/122 (43%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   +  PF TMP      L         +  YD+   G EI SG  R H  E++ +   
Sbjct: 425 KYPLSVRPFYTMPDPNNPKL---------SNSYDMFMRGEEIISGAQRIHDPELLTERAK 475

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             GI       +      AF+ G PPH G   G++R+VML LG  N+R+VS+FP      
Sbjct: 476 YHGIDL----EKIKSYIDAFKYGCPPHAGGGIGMERVVMLYLGLDNIRKVSMFPRDPKRI 531

Query: 570 DL 571
             
Sbjct: 532 TP 533


>gi|319776245|ref|YP_004138733.1| asparaginyl tRNA synthetase [Haemophilus influenzae F3047]
 gi|329123384|ref|ZP_08251948.1| asparagine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317450836|emb|CBY87060.1| asparaginyl tRNA synthetase [Haemophilus influenzae F3047]
 gi|327470966|gb|EGF16421.1| asparagine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 467

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 74/429 (17%), Positives = 138/429 (32%), Gaps = 68/429 (15%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 17  IGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYESEILRLTTGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   +E          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGKVVESPSEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           N V+++F
Sbjct: 250 MVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENFVNSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
           ++I Y DAI            P+   +   +EH        F   + V    +       
Sbjct: 310 VQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
                R   D     A     PG+  I            +G   +   +   +     + 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEI------------IGGSQREERLDVLDKRMEEMG 412

Query: 393 MQDGDSCFF 401
           +   D  ++
Sbjct: 413 LNPDDYWWY 421



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+ +    +G++ +             +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDKRMEEMGLNPDDYW----WYRDLRK 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP    
Sbjct: 427 YGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRVPR 463


>gi|89890462|ref|ZP_01201972.1| lysine--tRNA ligase, LysRS [Flavobacteria bacterium BBFL7]
 gi|89517377|gb|EAS20034.1| lysine--tRNA ligase, LysRS [Flavobacteria bacterium BBFL7]
          Length = 563

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 60/289 (20%), Positives = 113/289 (39%), Gaps = 24/289 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS--EWVLCIDG 75
           G  V ++G +   R  G   F +++D  G  QV  N D  C    KS  +     L   G
Sbjct: 47  GKQVNVAGRLMSRRIAGAASFAELQDSEGRIQVYFNRDEICPGDDKSQYNDVYKKLLDIG 106

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-------GEREYPESIRFKY 128
            ++    E     +  G++ +  +K  +L+ A +              +      +R++ 
Sbjct: 107 DIIGIEGELFKTQV--GEMTIMVKKFTLLTKALKPLPLPKVDAEGKVHDGFVDPEMRYRQ 164

Query: 129 RFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R+ DL  +   K   VKRT++ N+MR       + E  TPIL        AR F+     
Sbjct: 165 RYADLVVNPQVKEVFVKRTKLFNAMRNFFNEREYFEVETPILQPIPGGAAARPFITHHNS 224

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ + 
Sbjct: 225 LDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKDY 282

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRY 286
           + +++  E +L       +   +             + RI    +I  +
Sbjct: 283 NWMMDFTERLLEHCAVSVNGKTSSQFGEQTIEWKAPYPRITMRQSIIDF 331



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 7/130 (5%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 374 EGNYIQPTFITDYPKEMSPLCKAHRDNPELTERFELMVCGKEIANAYSELNDPIDQRERF 433

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  +  ++          RA + GMPP  G+  G+DR++M L    +++EV  FP 
Sbjct: 434 EAQVALADRGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLIMFLTNNPSIQEVLFFPQ 493

Query: 565 S---QNFCDL 571
               +   DL
Sbjct: 494 MKPEKKALDL 503


>gi|82916992|ref|XP_909898.1| PREDICTED: lysyl-tRNA synthetase-like isoform 1 [Mus musculus]
 gi|148703521|gb|EDL35468.1| mCG49108 [Mus musculus]
          Length = 595

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 61/287 (21%), Positives = 117/287 (40%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +   R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 125 KVAGRIQAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFVHINNKLRRGDIIGV 182

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E        G++ +  Q+I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 183 --EGNPGKTKKGELSIIPQEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 239

Query: 141 NI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 240 QKLIVRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 298

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E +L 
Sbjct: 299 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMLS 357

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          +I Y          + D   P    ++ E 
Sbjct: 358 GMVKSITGSY-------KITYHPDGPEGQAYEVDFTPPFRRISMVEE 397



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 477 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 536

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 537 YGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMK 572


>gi|163846800|ref|YP_001634844.1| lysyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222524619|ref|YP_002569090.1| lysyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|189082954|sp|A9WK04|SYK_CHLAA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|163668089|gb|ABY34455.1| lysyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222448498|gb|ACM52764.1| lysyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 491

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 65/357 (18%), Positives = 126/357 (35%), Gaps = 28/357 (7%)

Query: 4   YRTHSCGDLGVSDVG-----SFVRLSGWVH-RVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           YR+H+  +   +        + + L+G +    R  G I F  I D  G  Q+  +    
Sbjct: 30  YRSHTIAEALAAFDDLVAQSTTLTLTGRIIGARRIMGKIAFAHIEDGTGEIQLWLSRADL 89

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E  +  R +             A  +     TG+  L  +++ IL+ A   P P    
Sbjct: 90  GDEWFERFRDQL-----DTFDIVQASGVLRCTKTGERSLFVRELAILAKA-INPPPEKWA 143

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPE 175
                  R + R+LDL  +   + I + R R+I++MR  +    F+E  TP+L       
Sbjct: 144 GLQDVEERHRQRYLDLIVNRDRREIFRARARVISTMRRVLDERGFLEVETPVLQPLYGGA 203

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+        + Y L  A + Y + L+  GF   ++I   FR+E       P EF 
Sbjct: 204 AARPFITYHNALGQNLY-LRIATELYLKRLIVGGFPGVYEIGKNFRNEGVDRSHNP-EFT 261

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            ++   ++ +   ++  +E +L  +        T++     + +     R          
Sbjct: 262 MMECYQAYADYHAMMTLVEEMLSEICLAVHGTTTITYQGRELDFRPPWPR---------- 311

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN-EWARSQ 351
            I M          +    + + ++        +  +         D +  E+ +  
Sbjct: 312 -IAMATAIADRTGIDITQITDLDALQEAISARGLRVERKASWAKQVDELFSEFVQPH 367



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 52/148 (35%), Gaps = 25/148 (16%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +  + F+  +I+D+P             A +P                      +++   
Sbjct: 364 VQPHLFQPTFIIDYP------------VAMSPLAKRIPDRPDF---------TERFEAFI 402

Query: 487 NGFEIASGGIRNHMSEVMLQAFSN----VGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
            G EI +     +      + F           E           A + GMPP GG+  G
Sbjct: 403 AGMEIGNAFTELNDPFDQEERFREQLRAFAAGDEEAHQMDEDFINALRYGMPPTGGLGVG 462

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           IDR+VM+L    N+REV LFP  +   D
Sbjct: 463 IDRLVMVLTDQSNIREVILFPHLRERSD 490


>gi|326927622|ref|XP_003209990.1| PREDICTED: lysyl-tRNA synthetase-like [Meleagris gallopavo]
          Length = 596

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/333 (20%), Positives = 126/333 (37%), Gaps = 39/333 (11%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCI 73
            VR++G +H  R  G  +IF D+R      QV+AN      +   F I   +R   ++ +
Sbjct: 125 TVRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRLYKSEEEYFRINNKLRRGDIIGV 184

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G                G++ +   ++ +LS      LP        +  R++ R+LDL
Sbjct: 185 VG---------NPGKTKKGELSIIPYEVTLLSPCL-HMLPHLHFGLKDKETRYRQRYLDL 234

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSF 191
              D + +  + R +I+  +R  +    F+E  TP++        A+ F+          
Sbjct: 235 ILNDYVRQKFITRAKIVTYIRSFLDELGFLEIETPMMNIIPGGAMAKPFITYHNELDMKL 294

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++ 
Sbjct: 295 Y-MRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLME 352

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E +L G+ +  +          +I Y    +     + D   P    ++ +    +  
Sbjct: 353 ITEKLLSGMVKHITGSY-------KITYHPDGQDGQAYEIDFTPPFRRMSMVDELEKTLG 405

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
             F    S                  R F D +
Sbjct: 406 VKFPSTESFE------------TEETRRFFDDL 426



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 4/88 (4%)

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAF 529
           +      +++L     E+ +     +      Q F +   +K   ++           A 
Sbjct: 478 VHRGLTERFELFVMKKEVCNAYTELNDPFQQRQLFEDQAKAKAAGDDEAMFIDENFCTAL 537

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           + G+PP  G   GIDR  M L  + N++
Sbjct: 538 EYGLPPTAGWGMGIDRFAMFLTDSSNIK 565


>gi|288803723|ref|ZP_06409152.1| lysine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288333812|gb|EFC72258.1| lysine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 578

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 63/307 (20%), Positives = 121/307 (39%), Gaps = 29/307 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS--EWVL 71
             D    V ++G +   R  G   F +++D  G  QV    D  C    K   +     L
Sbjct: 47  KEDEQREVVIAGRMMGRRVMGKASFAELQDSKGRIQVYITRDDICPGEDKEFYNKVFKKL 106

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIR 125
              G  +    E     +  G+I + A++I +LS + +    V  +      +      R
Sbjct: 107 LDIGDFIGVKGEVFKTQM--GEISVHAKEITVLSKSLKPLPVVKYKDGEAYDKFEDPEQR 164

Query: 126 FKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
           ++ R++DL  +  +    +KR  ++ +MR       + E  TP L + +    AR F+  
Sbjct: 165 YRQRYVDLVVNEGVKDTFLKRAIVLRTMRKFFDEAGYTEVETPTLQSIAGGASARPFITH 224

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + +
Sbjct: 225 FNALNVDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRFHNP-EFTCMELYVQY 282

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRR------YGT 288
            + + +++  E +L  +  E +                 F R+   DAI+       YG 
Sbjct: 283 KDYNWMMSFTEKLLEKICIEVNGKPEVQVGDKVISFKAPFRRLPILDAIKEKTGFDLYGK 342

Query: 289 DKPDLRN 295
            + ++RN
Sbjct: 343 TEEEIRN 349



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 9/145 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+A+     +      + F
Sbjct: 379 EGTYIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERF 438

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  +  ++          R+ Q GMPP  GI  GIDR+VML+ G + ++EV LFP 
Sbjct: 439 IEQMRLADKGDDEAMIIDQDFLRSLQYGMPPTSGIGIGIDRLVMLMTGKEYIQEVLLFPQ 498

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGL 589
            +         P + SV++  ELG+
Sbjct: 499 MK----PEPKIPQS-SVKEWAELGV 518


>gi|282854731|ref|ZP_06264066.1| lysine--tRNA ligase [Propionibacterium acnes J139]
 gi|282582313|gb|EFB87695.1| lysine--tRNA ligase [Propionibacterium acnes J139]
          Length = 1109

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 10/253 (3%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   DS   +  +  R
Sbjct: 654 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDSMGVDSLRDFR 713

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 714 HTVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 767

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 768 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 827

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+   ++ 
Sbjct: 828 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 885

Query: 245 EQDDILNTMENVL 257
           +   + +    ++
Sbjct: 886 DYVQMRHLTREMI 898



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 472  NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYR 527
            +D     A ++DL+  G E+ +         +  + F+   +                  
Sbjct: 1010 DDPR--LAEKWDLIIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLE 1067

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP
Sbjct: 1068 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1102


>gi|149409811|ref|XP_001510627.1| PREDICTED: similar to asparaginyl-tRNA synthetase [Ornithorhynchus
           anatinus]
          Length = 568

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 68/344 (19%), Positives = 124/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++F+ +RD  G  Q V + +         + +E  + + G 
Sbjct: 145 GQRVKVFGWVHRLRRQGKNLMFVVLRDGTGYLQCVLSDELCQCYNGVVLSTESSVAVYGT 204

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 205 LKLTPKG----KQAPGGHELSCDYWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 260

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K    R+ +    R       + E + P L  +  EG           + +F  L Q
Sbjct: 261 NMSKIFKARSAVTRCFREHFFDRGYCEITPPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 318

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  DD+LN +E++
Sbjct: 319 SSQLYLETCIP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFDDMLNRLEDL 377

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                        F R+ Y DAI           +    +   
Sbjct: 378 VCDVVDRVLKSPAASLVYDLNPGFKPPKRPFKRMNYSDAIVWLKEHDVKKEDG-TYYEFG 436

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 437 EDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDSRLTE 480



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +S     +         L+ N  EI  G +R   SE +L+ +  
Sbjct: 459 RFPVEIKSFYMQRCPEDSRLTESVDV-------LMPNVGEIVGGSMRIWDSEELLKGYKR 511

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 512 EDIDPTP----YYWYTDQRKYGACPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCK 567

Query: 571 L 571
            
Sbjct: 568 P 568


>gi|260914055|ref|ZP_05920528.1| asparagine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631688|gb|EEX49866.1| asparagine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 467

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 70/389 (17%), Positives = 128/389 (32%), Gaps = 58/389 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVL 71
           +G  V + GW+   R    G+ FL I D      + A    + ++   E+ +      V+
Sbjct: 17  IGEKVTIRGWIRTRRDSKAGLSFLAIYDGSCFDPIQAIVNNDIENYASEVLRLTTGCSVI 76

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G V+   AE          +EL A+ +E+    E+        + +      +   L
Sbjct: 77  -VTGTVVESPAEGQA-------VELQAENVEVTGWVEDPETYPMAAKRHSIEYLREVAHL 128

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++    
Sbjct: 129 RPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENL 188

Query: 190 ------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q      A    + +   P FR E+  + R   EF
Sbjct: 189 PRDDKGAVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEF 248

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNN 273
           + ++ E++F    D     E++L+ VF                           N ++++
Sbjct: 249 WMIEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLKFFEKHVDKDVITRLENFINSD 308

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           F +I Y DAI            P+   +   +EH  +     F   + V    +      
Sbjct: 309 FAQIDYTDAIEVLLQSGKKFEFPVSWGIDLSSEHERYLAEEHFKSPVVVKNYPKDI---- 364

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 365 -KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 66/200 (33%), Gaps = 32/200 (16%)

Query: 377 KHLNIVNTEAIRVRL-DMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435
           K       + +  RL +  + D       D ++    +                  F   
Sbjct: 287 KFFEKHVDKDVITRLENFINSDFAQIDYTDAIEVLLQSG-------------KKFEFPVS 333

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTM----PQGGMES---LKGNDLLSIKAFQYDLVCNG 488
           W +D      + E ++     +  +               ++ ND     A   D++  G
Sbjct: 334 WGID-----LSSEHERYLAEEHFKSPVVVKNYPKDIKAFYMRLNDDGKTVA-AMDVLAPG 387

Query: 489 F-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             EI  G  R    +V+ +    +G++       +       + G  PH G   G +R++
Sbjct: 388 IGEIIGGSQREERLDVLDKRMEEMGLNP----EDYWWYRDLRRYGTVPHSGFGLGFERLI 443

Query: 548 MLLLGAKNVREVSLFPMSQN 567
           + + G +N+R+V  FP +  
Sbjct: 444 VYVTGVQNIRDVIPFPRAPR 463


>gi|162454192|ref|YP_001616559.1| asparaginyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
 gi|226695301|sp|A9GBR2|SYN_SORC5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|161164774|emb|CAN96079.1| asparaginyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
          Length = 446

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 74/353 (20%), Positives = 127/353 (35%), Gaps = 35/353 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWV 70
            + VGS V L GW++  R  G + FL++RD +G  Q V    +     F  A  V  E V
Sbjct: 13  SAHVGSTVVLRGWLYNKRSSGKLHFLELRDGFGTVQCVMAKSDVGDEVFAAADKVTQESV 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G V +            G  E++A    +L             +E+       +R 
Sbjct: 73  IDVVGEVKAHPKRA-------GVYEIAASGFRVLGP--TAGEYPISPKEHGTDFLMDHRH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR    H  +  R  II ++R       F     P+ T ++ EG           + +
Sbjct: 124 LWLRSKRQHAILRVRHTIIQAIRDFFDGRGFTLVDAPVFTPNACEGTSTLFQTDYHGEKA 183

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A+ F + +   P FR E  ++ R   EF+ ++ E++F++    +
Sbjct: 184 Y--LTQSGQLYMEAA-AAAFGKAYCFGPTFRAEKSKTRRHLAEFWMVEPEVAFMDLAGDM 240

Query: 251 NTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           +  E+ L  + E               +      V   F RI YD+A+      + + R 
Sbjct: 241 DLAEDFLCFIVERVLERRRPELAVLERDVGKLEAVKKPFPRIRYDEAVAILNEARAEKRK 300

Query: 296 PIIMHNVT-----EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
                 +      E F   +  + S           +    K     R   D 
Sbjct: 301 MAGEAEIPDFPWGEDFGGEDETIISGRYDRPVMIHRYPAQVKAFYMKRDPTDD 353



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 53/178 (29%), Gaps = 29/178 (16%)

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE-------------KKID 453
            +  +   +AR    +  G       +F W  DF      E+E              +  
Sbjct: 285 DEAVAILNEARAEKRKMAG--EAEIPDFPWGEDF----GGEDETIISGRYDRPVMIHRYP 338

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
                F M +   +      +  +    Y       E+  GG R      + +A     +
Sbjct: 339 AQVKAFYMKRDPTDDRLALCVDVLAPEGY------GEVIGGGQREDDLATLERAIEAHQL 392

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
                   FG      + G  PH G   G++R V  + G  +VRE   FP   N    
Sbjct: 393 PP----EAFGWYLDLRRYGTFPHAGFGLGVERSVAWICGLPHVRETIPFPRMLNRLSP 446


>gi|320450617|ref|YP_004202713.1| asparaginyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320150786|gb|ADW22164.1| asparaginyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 438

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 62/266 (23%), Positives = 100/266 (37%), Gaps = 14/266 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWV 70
               G  V L GW+++ R  G I FL +RD  G  Q            FE A  +  E  
Sbjct: 9   AKYEGQEVELRGWLYQRRSKGKIHFLILRDGTGFLQATLFKGEVPEEVFEQADHLPQETA 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + GLV              G  ELS + +E++S+         G +E+       +R 
Sbjct: 69  LKVHGLVRRDER-------APGGFELSVRNLEVVSL--PQGEYPIGPKEHGIDFLMDHRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R  +  ++        F+    PILT S+ EG  D      +  G 
Sbjct: 120 LWLRHRRPFAVMRIRDELERAIHDFFAERGFLRFDAPILTPSAVEGTTDLFEVD-LFDGE 178

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L Q+ Q Y     A  F + +   P FR E  ++ R   EF+ ++ E++F+  ++ +
Sbjct: 179 KAYLSQSGQLY-AEAGALAFGKVYTFGPTFRAERSKTRRHLLEFWMIEPEVAFMTHEENM 237

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLR 276
              E ++  +              L 
Sbjct: 238 ALQEELVSHLVGRVLTRRARELEMLE 263



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 14/117 (11%)

Query: 451 KIDFAHNPFTMPQG--GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           +       F M       E +  +DLL+ + +         EI  G  R H  E++ +  
Sbjct: 328 RYPARIKAFYMEPDPEDPELVLNDDLLAPEGYG--------EIIGGSQRIHDLELLRRKI 379

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
              G+     E  +       + G  PH G   G++R V  + G  +VRE   FP  
Sbjct: 380 QEFGLP----EEVYDWYLDLRRFGSVPHSGFGLGLERTVAWICGLAHVREAIPFPRM 432


>gi|319897125|ref|YP_004135320.1| asparaginyl tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432629|emb|CBY80990.1| asparaginyl tRNA synthetase [Haemophilus influenzae F3031]
          Length = 467

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 74/429 (17%), Positives = 138/429 (32%), Gaps = 68/429 (15%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 17  IGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYESEILRLTTGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   +E          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGKVVESPSEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           N V+++F
Sbjct: 250 MVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENFVNSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
           ++I Y DAI            P+   +   +EH        F   + V    +       
Sbjct: 310 VQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
                R   D     A     PG+  I            +G   +   +   +     + 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEI------------IGGSQREERLDVLDKRMEEMG 412

Query: 393 MQDGDSCFF 401
           +   D  ++
Sbjct: 413 LNPDDYWWY 421



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+ +    +G++ +             +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDKRMEEMGLNPDDYW----WYRDLRK 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP    
Sbjct: 427 YGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRVPR 463


>gi|299472298|emb|CBN79710.1| Lysyl-tRNA ligase [Ectocarpus siliculosus]
          Length = 849

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 107/257 (41%), Gaps = 12/257 (4%)

Query: 16  DVGSF----VRLSGWVHRVRPHGGIIFLDIR-DHYGITQVVANPDSACFEIAKSVRSEWV 70
           +VG      V L+G + + R  G ++F  ++ D   +  + +  D    E A        
Sbjct: 104 EVGEKQEDVVSLAGRIVKKREQGKLLFYGMKADGASVQVMASLSDYEGGEEA--FWKTNG 161

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L   G ++  +          G++ +    + +LS      LP   E    +  R++ R+
Sbjct: 162 LLRRGDLIGVTG--YPGKSKKGELSVFPTTMVLLSPCL-HMLPNSREGLKNQETRYRQRY 218

Query: 131 LDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDL  +    +    R++++N +R  +    F+E  TP++   +        V    +  
Sbjct: 219 LDLMTNDETRRVFQVRSKVVNYIRSFLDERGFLEVETPMMNMVAGGATAKPFVTHHNDLN 278

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +   ++ + +D+
Sbjct: 279 LDLFMRVAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYQAYADYEDL 337

Query: 250 LNTMENVLRGVFEEFSN 266
           ++  E ++ G+ ++   
Sbjct: 338 MSMTEQMISGMVKKICG 354



 Score = 80.5 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 6/118 (5%)

Query: 455 AHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            H  F      + S     +        +++L   G E+ +     +   V  Q F +  
Sbjct: 440 VHPTFITDHPEIMSPLAKYHRSRPGLTERFELFVCGRELCNAYTELNNPMVQRQRFLDQS 499

Query: 513 IS----KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +     +  +        A + G+PP  G   G+DR+ M L    N++EV LFP  +
Sbjct: 500 KASVAGDDEAQVHDEEFCTAMEYGLPPTAGWGVGVDRLTMFLSDKNNIKEVLLFPAMK 557


>gi|253990240|ref|YP_003041596.1| asparaginyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781690|emb|CAQ84853.1| asparaginyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 495

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 128/385 (33%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL + D      + A  ++        V    +    G
Sbjct: 45  VDSEVTVRGWIRTRRDSKAGISFLAVYDGSCFNPLQAVVNNNLPNYQDEV----LYLTTG 100

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  +   + +       EL A K+ ++   E+        + +      +   L  R 
Sbjct: 101 CSVEVTGTVVASLGQGQNFELQATKVVVIGKVEDPDTYPMAAKRHSIEYLREVAHLRPRT 160

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++        +   STP++TA+  EGA +    S ++        
Sbjct: 161 NLIGAVARMRHTLAQALHRFFHENGYFWVSTPLITAADTEGAGEMFRVSTLDLQNLPLTD 220

Query: 189 -------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 221 KGEVDFNEDFFGREAFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMLE 280

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + DD  +  EN+L+ VF+                            ++++F +I
Sbjct: 281 PEVAFADLDDAASLAENMLKYVFKAALEERADDLQFFAERVDKDVITRLEKFINSDFAQI 340

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI           NP+    ++ +EH  +   + F   + V    +          
Sbjct: 341 DYTDAIEILQNCGQKFENPVFWGVDLSSEHERYLAEKHFQAPVVVKNYPKDI-----KAF 395

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 396 YMRMNDDGKTVAAMDVLAPGIGEII 420



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 5/122 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    +++ + 
Sbjct: 376 EKHFQAPVVVKNYPKDIKAFYMRMNDDGKTVAAMDVLAPGIGEIIGGSQREERLDMLDKR 435

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              +G++K      +       + G  PH G   G +R+V  + G  NVR+V  FP +  
Sbjct: 436 MEEMGLNK----EDYWWYRDLRRYGTVPHSGFGLGFERLVSYVTGVPNVRDVIPFPRTPR 491

Query: 568 FC 569
             
Sbjct: 492 SA 493


>gi|224531928|ref|ZP_03672560.1| asparaginyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511393|gb|EEF81799.1| asparaginyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 462

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 133/374 (35%), Gaps = 54/374 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +  + A      +    +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTTRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGASIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTYSFNVIGDTDPKTYPLQKKRHTFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------ 186
           +R +T       R +I   +        F   +TPI+T++  EGA +    S +      
Sbjct: 126 IRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEMFRVSTLKFNKPN 185

Query: 187 -------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 186 NSLSNIDFKDDFFGKEAFLSVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWM 245

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR-------------------- 276
           ++ EM+F + +D +   EN+L+ +     N  +   +FL                     
Sbjct: 246 IEPEMAFYKLNDNIILAENLLKYLLSSILNECSQDMDFLENYIEKGLIKKLENVINSNFE 305

Query: 277 -ICYDDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSK---ILSVNPGYEVWAIP 330
            I Y  AI      K +    P    ++ T+H  +     F K   I+     ++ + + 
Sbjct: 306 VITYTKAIEILEKSKKNFEIKPYWGIDLQTDHERYLTEETFKKPVVIIDYPKNFKAFYMK 365

Query: 331 AKGGGGNRAFCDRM 344
                      D +
Sbjct: 366 INKDNKTVKGMDIL 379



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 379 LVPRIGEIIGGSEREDNLQKLENRIKELNLNI----EHLNWYLDLRRFGSTPHSGFGLGL 434

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V    G  N+R+   FP +  
Sbjct: 435 ERLVQYSTGISNIRDSIPFPRTPK 458


>gi|224437803|ref|ZP_03658750.1| lysyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144250|ref|ZP_07806443.1| lysyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129281|gb|EFR46898.1| lysyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 526

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 110/261 (42%), Gaps = 11/261 (4%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + G V  +R  G   F+ I+D  G+ Q   + +    + A        +   G +++ S
Sbjct: 67  SIVGRVRFIRLMGKACFVKIQDESGVLQAYISKNDVGEDFA----YIKKILEVGDIINVS 122

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                    TG++ +     +ILS +  +PLP          +R++ R++DL  +   K 
Sbjct: 123 GYAFVTK--TGELSIHTLSFKILSKS-IVPLPEKFHGLSDIELRYRQRYVDLIVNENVKE 179

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             K R++II+ +R     + F+E  TP+L        AR F+          Y L  AP+
Sbjct: 180 TFKLRSKIISCVRQFFEKKGFLEVETPMLHPIPGGANARPFITHHNALDVERY-LRIAPE 238

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F++   FR+E       P EF  ++   ++   +D++   + +   
Sbjct: 239 LYLKRLIVGGFEAIFELNRNFRNEGMDHSHNP-EFSMIEFYWAYKTYEDLITLTQELFTY 297

Query: 260 VFEEFSNGNTVSNNFLRICYD 280
           + EE      + +N   I + 
Sbjct: 298 LLEELKLPKILKHNDTEIDFS 318



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F     +K+  +     +      
Sbjct: 399 NDENLEIADRFELFIGGKEIANGFSELNDPLDQLERFKEQVKAKDAGDEEAQYMDEDYVW 458

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL  AK++++V LFP
Sbjct: 459 ALAHGMPPTAGEGIGIDRLVMLLSDAKSIKDVILFP 494


>gi|160944973|ref|ZP_02092199.1| hypothetical protein FAEPRAM212_02488 [Faecalibacterium prausnitzii
           M21/2]
 gi|158442704|gb|EDP19709.1| hypothetical protein FAEPRAM212_02488 [Faecalibacterium prausnitzii
           M21/2]
          Length = 462

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 62/348 (17%), Positives = 120/348 (34%), Gaps = 49/348 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ + + GW   +R    I F+ + D      +    +      A  + +   +   GL 
Sbjct: 17  GTEITVCGWAKNIRDSKNIGFIALSDGGCFKTLQVVLE------AGKLANYDEVIHTGLY 70

Query: 78  --MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +    + +         EL+A+ +EIL        P+  ++   E +R     L  R 
Sbjct: 71  SSLRIKGKLVLTPQAKQPFELNAESVEILGDCPADEYPLQKKKMSMEYLR-TMPTLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           +T +     R+    ++        F+   +P++TAS  EGA +    + ++        
Sbjct: 130 NTFNAAFRVRSVAAYAIHKFFQENGFVYAHSPLITASDCEGAGEMFRVTTLDLDNVPKTE 189

Query: 190 --------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+  P       Q +   MA  F + +   P FR E   + R   EF+ ++
Sbjct: 190 DGAVDYSKDFFEKPVNLTVSGQLEAEAMAMAFGKVYTFGPTFRAEKSFTTRHAAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            EM+F + +  ++  E +++ V     +       F                      RI
Sbjct: 250 PEMAFCDLNGYMDNAEAMIKYVIRYVLDNCPDEMAFFNQFIDKGLVERLELVANSEFARI 309

Query: 278 CYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
            Y +AI     +    + P+       TEH  +    V+ K + V   
Sbjct: 310 SYTEAIEILKKNNKKFQYPVEWGVDIQTEHERYLTEVVYKKPVFVTDY 357



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 47/136 (34%), Gaps = 24/136 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P     +E K        F M Q               A    LV    E+ 
Sbjct: 350 KPVFVTDYP-----KEIKS-------FYMKQNAD--------GKTVAAADMLVPGIGELI 389

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R      ++     +G+ K   E          + G   H G   G +R++M L G
Sbjct: 390 GGSQREEDYGKLVARMDELGMDKTNYE----WYLNLRKFGGVEHAGYGLGFERMIMYLTG 445

Query: 553 AKNVREVSLFPMSQNF 568
            +N+R+V  FP +   
Sbjct: 446 IQNIRDVLPFPRTAYG 461


>gi|296222717|ref|XP_002757320.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic [Callithrix
           jacchus]
          Length = 548

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 70/344 (20%), Positives = 124/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V   +         + +E  + + G 
Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGFLQCVLADELCLCYNGLLLSTESSVAVYGT 184

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 185 LNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 240

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K    R+ I    R       + E + P L  +  EG           + +F  L Q
Sbjct: 241 NMSKIFRARSMITRCFRDHFFDRGYCEIAPPTLVQTQVEGGSTLFKLDYFGEEAF--LTQ 298

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  +D+LN +E++
Sbjct: 299 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLSFEDLLNRLEDL 357

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 358 VCDVVDRVLKSPVASIVHELNPNFKPPKRPFKRMNYSDAIVWLKEHDIKKEDG-TFYEFG 416

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 417 EDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDPRLTE 460



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   +E +L  +   GI        +       + G  PHGG   G+
Sbjct: 465 LMPNVGEIVGGSMRIWDNEEILAGYKREGIDPTP----YYWYTDQRKYGTCPHGGYGLGL 520

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R +  +L   ++R+V L+P     C  
Sbjct: 521 ERFLTWILNRYHIRDVCLYPRFVQRCKP 548


>gi|195392834|ref|XP_002055059.1| GJ19167 [Drosophila virilis]
 gi|194149569|gb|EDW65260.1| GJ19167 [Drosophila virilis]
          Length = 580

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 114/255 (44%), Gaps = 10/255 (3%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
            ++G +H +R  G  +IF D+R      QV+A+  S   E A  + +  +    G ++  
Sbjct: 112 SVAGRIHAIRESGAKLIFYDLRGEGVKLQVMASAKSYKSEKAFELDTAKLRR--GDIIGV 169

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLH 139
           +          G++ +   ++++LS      LP        +  R++ R+LDL  +  + 
Sbjct: 170 NG--HPGKTKKGELSIMPTELKLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNSKVR 226

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
           +N   R +II+ +R  +    F+E  TP++   +    A+ F+      +   + +  AP
Sbjct: 227 ENFQIRAKIISYVRQFLDRLGFLEIETPMMNMIAGGATAKPFVTHHNELKMDLF-MRIAP 285

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ 
Sbjct: 286 ELYHKMLVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYMAYADYYDLIEITEQMIS 344

Query: 259 GVFEEFSNGNTVSNN 273
           G+ +       +  +
Sbjct: 345 GMVKAIHGSYKIKYH 359


>gi|292487848|ref|YP_003530723.1| asparaginyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899075|ref|YP_003538444.1| asparaginyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291198923|emb|CBJ46033.1| asparaginyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553270|emb|CBA20315.1| asparaginyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|312171970|emb|CBX80227.1| asparaginyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 466

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 128/385 (33%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI F+ + D      V A  +++       V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFIAVYDGSCFDPVQAVVNNSLNNYQNEV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A ++E++   ++        + +      +   L  R 
Sbjct: 72  CSVVITGKVVASPGQGQSFEIQATEVEVVGWVDDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDMENLPRTP 191

Query: 188 ------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      AS   + +   P FR E+  + R   EF+ L+
Sbjct: 192 EGKVNYDEDFFGKEAFLTVSGQLNGETYASAVSKIYTFGPTFRAENSHTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            EM+F + +D     E +L+  F+                            V+ +F ++
Sbjct: 252 PEMAFADLEDNAALAEAMLKYAFKAVLTERADDMAFFAERVDKDAVSRLERFVTTDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y +AI           NP+   +   +EH  +   + F   + V    +          
Sbjct: 312 NYTEAIEILLASGQKFDNPVAWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    EV+    + +G++K      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEVLDARLAEMGLNK----EDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 426 YGTVPHSGFGLGFERLIAYVTGVQNVRDVIAFPRTPR 462


>gi|168185695|ref|ZP_02620330.1| asparaginyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169296388|gb|EDS78521.1| asparaginyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 463

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 77/426 (18%), Positives = 151/426 (35%), Gaps = 68/426 (15%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             V++SGW+  +R      F+++ D       QVV   +   F+          + I+G 
Sbjct: 19  KEVKISGWIRTLRASNKFGFIEVNDGSFFKNIQVVFGAELENFKEISKYAISSSVTIEG- 77

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                 E +         E+ A+K+ +   ++    P+  +R   E +R     L  R +
Sbjct: 78  ------ELVITEGAKQPFEIHAKKVVLEGKSDADY-PLQKKRHTFEYLR-SIAHLRPRSN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                   R+    ++      + F+   TPI+T S  EGA +    + ++  +     Q
Sbjct: 130 AFSAVFRVRSLAAYAIHKFFQDQGFVYVHTPIITGSDCEGAGEMFRVTTLDMENLPKDEQ 189

Query: 197 APQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               YKQ                  + A  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 190 GNVDYKQDFFGKQSNLTVSGQLEAEIYALAFRNVYTFGPTFRAENSNTARHASEFWMIEP 249

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSNNFLRIC 278
           EM+F E  D ++  E +++ +     +                      N V+++F RI 
Sbjct: 250 EMAFAELKDYMDVAEEMVKYIINYVRDNAPEEMEFFNKFIDKGLLERLDNVVNSHFARIS 309

Query: 279 YDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
           Y +A+        +   P+   +   TEH  +   +++ K + V    +           
Sbjct: 310 YTEAVEILQKSGAEFEYPVEWGIDLQTEHERYLTEQIYKKPVFVTDYPKDI--------- 360

Query: 337 NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
            +AF  RMN+  ++     L          G    +G   +   +   EA    L ++  
Sbjct: 361 -KAFYMRMNDDNKTVAAADLLV-------PGIGEIIGGSQREERLDILEARMAELGLERE 412

Query: 397 DSCFFI 402
           D  +++
Sbjct: 413 DYWWYL 418



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 48/134 (35%), Gaps = 24/134 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P        K I      F M          ND     A    LV    EI 
Sbjct: 349 KPVFVTDYP--------KDIKA----FYMRM--------NDDNKTVAAADLLVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +++    + +G+ +      +       + G   H G   G +R++M L G
Sbjct: 389 GGSQREERLDILEARMAELGLER----EDYWWYLELRKYGETKHAGYGLGFERMIMYLTG 444

Query: 553 AKNVREVSLFPMSQ 566
             N+R+V  FP + 
Sbjct: 445 MSNIRDVLPFPRTP 458


>gi|66812996|ref|XP_640677.1| lysine-tRNA ligase [Dictyostelium discoideum AX4]
 gi|60468698|gb|EAL66700.1| lysine-tRNA ligase [Dictyostelium discoideum AX4]
          Length = 551

 Score =  181 bits (460), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 9/251 (3%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
             V ++G V   R  G G++F DI   +   QV+ N  +        V+   +L    ++
Sbjct: 78  QVVSIAGRVLSKRAAGSGLVFYDITGEFNKVQVLVNKRAYASCEEDYVKINGLLRRGDII 137

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RD 136
               A+       TG++ L A ++ +LS      LP           RF+ R+LD+   +
Sbjct: 138 ---GAKGTPGRSKTGELSLFATEVILLSPCL-HMLPKAASGLTDPETRFRQRYLDMICNE 193

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR-DFLVPSRVNQGSFYALP 195
           ++ KN + R+++I  +R  +    FIE  TP++   +   A   FL          + + 
Sbjct: 194 SVKKNFIIRSKVIQGVRRYLDNLGFIEVETPMMNMIAGGAAAKPFLTHHNALNMDLF-MR 252

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G DR ++I   FR+ED      P EF   +  M++ + +D+    E 
Sbjct: 253 IAPELYLKQLVVGGMDRVYEIGKQFRNEDIDHTHNP-EFTTCEFYMAYADYNDLYTMTEQ 311

Query: 256 VLRGVFEEFSN 266
           +L+ +      
Sbjct: 312 LLQSIVMSIHG 322



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 4/93 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGM 533
              +++L  N  EI +     +   V ++ F+    +K   ++           + + G+
Sbjct: 435 LTERFELFVNTKEICNAYTELNNPFVQIERFAEQAKAKAAGDDESMLIDKVFTTSLEYGL 494

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG   GIDR  ML+    N++EV LFP  +
Sbjct: 495 PPTGGFGLGIDRFAMLMSDTYNIKEVILFPAMK 527


>gi|332638896|ref|ZP_08417759.1| asparaginyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 431

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 69/313 (22%), Positives = 123/313 (39%), Gaps = 32/313 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRS 67
           +   + V   VRL  W+   R  G + FL +RD     Q V + ++   EI   AK++  
Sbjct: 7   EDAKNYVDQEVRLGAWLRNKRGSGKMQFLQLRDGTAFFQGVVSKEAVGEEIFAKAKALTQ 66

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           E  + + G +                 E+  + + ++  ++  P+     +E+       
Sbjct: 67  ETSMYLIGTIREDERSPF-------GYEMQVKDLTVVGESDGYPITP---KEHGTDFLMD 116

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +R L LR       +  R  II +       E F++  +PILT S+PEG  +       +
Sbjct: 117 HRHLYLRHIQPFAVLRIRNTIIAATYEFFNKEGFVKIDSPILTGSAPEGTTELFHTEYFD 176

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
             ++ +  Q  Q Y     A  F R F   P FR E  ++ R   EF+ ++ EM+++ QD
Sbjct: 177 TDAYMS--QTGQLY-AEAGAMAFGRVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAWMTQD 233

Query: 248 DILNTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRRYGTDKP 291
           D L   E  +  + +   + N                     + R+ YDDAI+    +  
Sbjct: 234 DSLEVQERYIAYLIQAVLDRNQYELDLLGRDKELLQSYTQLPYPRVSYDDAIKLLQENDF 293

Query: 292 DLRNPIIMHNVTE 304
           D+   +   +  E
Sbjct: 294 DVEWGVDFGSPEE 306



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 33/159 (20%)

Query: 426 IINCNCFEFCWIMDF--------------PFY--EWNEEEKKIDFAHNPFTMPQGGMESL 469
           ++  N F+  W +DF              P +   + +E K      +P        + +
Sbjct: 287 LLQENDFDVEWGVDFGSPEETFLANHFAKPVFITNFPKEIKAFYMKRHP-----DRDDVV 341

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              DLL+ + +         EI  G  R+   + + Q     G+  +     +       
Sbjct: 342 ISADLLAPEGYG--------EIIGGSERDTDYDYLEQRIKEQGLDLKE----YSWYLDLR 389

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           + G  PH G   G++R V  + G +++RE   FP + N 
Sbjct: 390 KYGSVPHSGFGLGLERAVTWITGEEHIREAIPFPRTMNR 428


>gi|257452823|ref|ZP_05618122.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 463

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 130/376 (34%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
             + +   V+L  WV ++R      FL+I D       QVV +     F+    +     
Sbjct: 13  KETYIDKEVKLGAWVRKIRSQKNFGFLEINDGSFFNGIQVVFDTSLENFDEISRLSIASS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G ++              + E+ A K+E+   A+ L  P+  +R   E +R K   
Sbjct: 73  VIVEGTLVKSEGAG-------QEFEIKASKVEVCQKAD-LDYPLQNKRHSFEFLRTKS-H 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++      +NF+   TPI+T+S  EGA +    + ++   
Sbjct: 124 LRARTNTFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITSSDAEGAGEMFRITTLDLNN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       + F   +   P FR E   + R   E
Sbjct: 184 VPKNEDGSINFQKDFFGKSTNLTVSGQLNGETYCAAFRNIYTFGPTFRAEYSNTARHASE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ EM+F + +  ++  E +++ +            NF                   
Sbjct: 244 FWMIEPEMAFADLEVNMDIAEKMVKYIIRYVMETCPEEMNFFNQFIEKGLFDKLNNVLNN 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+   +   +EH  +     F K + +    +     
Sbjct: 304 DFGRLTYTEAIDILEKSGKKFEYPVKWGIDLQSEHERYLAEEHFKKPVFLVDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  ++NE
Sbjct: 361 -------KAFYMKLNE 369



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 57/147 (38%), Gaps = 26/147 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  +++D+P        K I      F M           D  +++A  
Sbjct: 338 HERYLAEEHFKKPVFLVDYP--------KDIKA----FYMK-------LNEDGKTVRAM- 377

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+     EI  G  R    E++    + +G+ K      +       + G  PH G  
Sbjct: 378 -DLLAPQIGEIIGGSQREDNLEILENRMNELGMDK----EDYSFYLDLRKYGSFPHSGYG 432

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G +R++M L G  N+R+V  FP + N
Sbjct: 433 LGFERMIMYLTGMANIRDVIPFPRTPN 459


>gi|326692528|ref|ZP_08229533.1| asparaginyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 439

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/307 (21%), Positives = 123/307 (40%), Gaps = 32/307 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCI 73
           VG  V++  W+ + R  G + FL +RD            +   + FE+AK ++ E  L +
Sbjct: 21  VGQTVKIGAWLRQKRGSGKLAFLQLRDGTAFFQAVVAKVDVPESVFELAKGLKQETSLYV 80

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +  +          E++   IE++  + + P+     +E+     F  R L L
Sbjct: 81  TGEIREDARSSF-------GYEMAVSDIEVIGESHDYPITP---KEHGTDFLFDERHLYL 130

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +I +       E F++  +P+LT S+PEG  +        + ++  
Sbjct: 131 RHLKPFATLKIRNTLIAATYEFFNNEGFVKLDSPLLTGSAPEGTTELFETDYFGESAY-- 188

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L   
Sbjct: 189 LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMVEPEMAFMHQEESLELQ 247

Query: 254 ENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           E  +  +  +    N                     + RI YDDA++    +  D+   +
Sbjct: 248 ERYISFLISKVLERNEQELDILGRDKSLLASYTELPYPRISYDDAVKLLQDNGFDIEWGV 307

Query: 298 IMHNVTE 304
              +  E
Sbjct: 308 DFGSPEE 314



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 51/148 (34%), Gaps = 11/148 (7%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES---LKGNDLLSIKAFQY 482
           ++  N F+  W +DF      E      FA   F +          +K +          
Sbjct: 295 LLQDNGFDIEWGVDF--GSPEETFLANHFARPVFIINFPKAIKAFYMKRHATRDDVVVSA 352

Query: 483 DLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           DL+      EI  G  R+   E +       G+        +       + G  PH G  
Sbjct: 353 DLLAPEGYGEIIGGSERDTDYEYLKMRIEEQGLDL----EEYNWYLDLRKFGSAPHSGFG 408

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G++R+V  + G +++RE   FP   N 
Sbjct: 409 LGLERMVTFVTGEEHIREAIPFPRMTNR 436


>gi|210632478|ref|ZP_03297406.1| hypothetical protein COLSTE_01308 [Collinsella stercoris DSM 13279]
 gi|210159573|gb|EEA90544.1| hypothetical protein COLSTE_01308 [Collinsella stercoris DSM 13279]
          Length = 467

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 93/275 (33%), Gaps = 23/275 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++GWV  VR      F+ + D      +    +         +  + V       
Sbjct: 18  GQTVTVAGWVKSVRDMKNFGFVTLNDGSCFKDLQVVMNRESLANYDEIAHQNVSAA---- 73

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +  + E           EL+A +I +  V+         ++          + L  R + 
Sbjct: 74  LVCTGELKLTPDAPQPFELAATEIVVEGVSAPDYPLQ--KKRATVEFLRTQQHLRPRTNL 131

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--------- 188
                  R+    ++        F+  +TPI+TAS  EGA +    + ++          
Sbjct: 132 FRAVFRVRSVAAAAIHRFFQDRGFVYVNTPIITASDCEGAGEMFHVTTIDPANPPLDDKG 191

Query: 189 -----GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+   A      Q      A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 192 NVDFSQDFFGTAASLTVSGQLNAENFAMAFGDVYTFGPTFRAENSNTTRHAAEFWMIEPE 251

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           ++F +  D +N  E++L+ V  +  +        L
Sbjct: 252 IAFADLADDMNLAEDMLKYVIRDVMDRCPDELAML 286



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 51/149 (34%), Gaps = 24/149 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +     ++ D+P                 F M        + ND     A  
Sbjct: 342 HERFLTEEHFKCPTFVTDYP------------AEIKAFYM--------RLNDDGKTVAAA 381

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    +V+ +  + +G+       ++       + G   H G   
Sbjct: 382 DCLVPGIGEIIGGSQREERLDVLERRIAELGMDP----EQYKYYLDLRRYGTCKHAGFGL 437

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G +R+VM L G  N+R+V   P +   C+
Sbjct: 438 GFERLVMYLTGVGNIRDVLPHPRTVGSCE 466


>gi|332158401|ref|YP_004423680.1| asparaginyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331033864|gb|AEC51676.1| asparaginyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 434

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 71/310 (22%), Positives = 132/310 (42%), Gaps = 29/310 (9%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKS 64
            C ++     G  V+L+GWV+     G  IFL IRD  GI Q V   +      FE AK 
Sbjct: 6   YCEEIKPELDGKRVKLAGWVYTNMRVGKKIFLWIRDSTGIVQTVLAKNVVGEEVFERAKK 65

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E  + ++G+V +            G  E+  +K++++    E P+P   ++  PE +
Sbjct: 66  LGRESSVIVEGIVKADER-------APGGAEVHVEKLQVIQAVSEYPIPENPDQASPE-L 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              YR L +R   +   +  +  ++ + R  ++ E + E   PIL   + EG        
Sbjct: 118 LLDYRHLHIRSPKVSAIMKVKETLMMAAREWLLREGWHEVFPPILVTGAVEGGATLFKLK 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             ++  +  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   EF+ L++E +++
Sbjct: 178 YFDK--YAYLSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWM 234

Query: 245 EQDDILNTMENVLRGVFE---------------EFSNGNTVSNNFLRICYDDAIRRYGTD 289
           +  DI+   E ++  + +               + +        F RI YD+AI    + 
Sbjct: 235 DLWDIMKVEEELVSYMVQRTLELRRKEIEMFRDDLTTLKNTEPPFPRISYDEAIEILQSK 294

Query: 290 KPDLRNPIIM 299
              +     M
Sbjct: 295 GVKIEWGDDM 304



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 21/154 (13%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +     ++G          +  D PF+ +             F M +         D 
Sbjct: 295 GVKIEWGDDMGADEERVLTEEF--DRPFFVY-----GYPKHIKAFYMKED------PKDP 341

Query: 475 LSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
             + A   D++      EI  G  R    E +++     G+  +  E          + G
Sbjct: 342 RKVLAA--DMLAPEGYGEIIGGSEREDDYEKLVKRIKEEGMDPKDYE----WYLDLRKYG 395

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             PH G   G++R+V  +L   ++R  +LFP + 
Sbjct: 396 SVPHSGFGLGVERLVAWVLKLDHIRWAALFPRTP 429


>gi|325955446|ref|YP_004239106.1| Lysyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323438064|gb|ADX68528.1| Lysyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 564

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 56/273 (20%), Positives = 112/273 (41%), Gaps = 14/273 (5%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           + G  V+L+G +   R  G   F +++D  G  Q+  + D    E   +   + +L I  
Sbjct: 44  EEGKVVKLAGRLMSTRIMGKASFAELQDSEGRIQIYISRDDLPNESDYNTVFKKLLDIGD 103

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKY 128
            +     E        G+I +   ++ +L+        V  + +           +R++ 
Sbjct: 104 FI---GIEGYLFKTKVGEISVHVTQLTVLAKTLRPLPIVKTDDDGHVFDAFVDPELRYRM 160

Query: 129 RFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R++DL  +   K I  KRT++  +MR    A  ++E  TPIL +      AR F+     
Sbjct: 161 RYVDLVVNPHVKTIFQKRTKLFQAMRDFFNARGYLEVETPILQSIPGGAAARPFITHHNA 220

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ + 
Sbjct: 221 LDIPLY-LRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKDY 278

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           + +++  E +L       +     +     I +
Sbjct: 279 NWMMDFTEQLLEHCAIAVNGSTKATFGEHEIDF 311



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 25/143 (17%)

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             N  +  +I D+P             A +P T      E L           +++L+  
Sbjct: 370 EGNYIQPTFITDYP------------KAMSPLTKKHRDNEQL---------TERFELMVC 408

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGI 543
           G EIA+     +      + F       E  ++          RA + GMPP  G+  G+
Sbjct: 409 GKEIANSYSELNDPIDQRERFEEQLKLSEKGDDEAMFIDQDFLRALEYGMPPTAGLGIGM 468

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR++M L    +++EV  FP  +
Sbjct: 469 DRLLMYLTNNPSIQEVLFFPQMR 491


>gi|281337495|gb|EFB13079.1| hypothetical protein PANDA_009023 [Ailuropoda melanoleuca]
          Length = 545

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 69/344 (20%), Positives = 127/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + + G+
Sbjct: 122 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLSDDLCQCYNGVVLATESSVAVYGM 181

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 182 LNLTPEG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 237

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ +    R       + E + P L  +  EG           + +F  L Q
Sbjct: 238 NMSKILKARSVVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 295

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  +++LN +E++
Sbjct: 296 SSQLYLETCIP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFEELLNRLEDL 354

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 355 VCDVVDRVLKSPAASIVRDLNPNFKPPKRPFKRMNYSDAIVWLKEHDIKKEDG-TFYEFG 413

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 414 EDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDSRLTE 457



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +S     +         L+ N  EI  G +R   SE +L  +  
Sbjct: 436 RFPVEIKSFYMQRCPEDSRLTESVDV-------LMPNVGEIVGGSMRIWDSEEILAGYKR 488

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 489 EGIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCK 544

Query: 571 L 571
            
Sbjct: 545 P 545


>gi|226322404|ref|ZP_03797922.1| hypothetical protein COPCOM_00172 [Coprococcus comes ATCC 27758]
 gi|225209204|gb|EEG91558.1| hypothetical protein COPCOM_00172 [Coprococcus comes ATCC 27758]
          Length = 463

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 118/369 (31%), Gaps = 52/369 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   V + GWV  +R      F+ + D       QVV + +   F     +     
Sbjct: 13  REEYLDKEVTIGGWVRSIRDSKTFGFIVVNDGSFFENLQVVYHDNMENFGEISKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A ++ +   +     P+  +R   E +R     
Sbjct: 73  IIVKGTLVATPQ-------AKQPFEIQATEVVVEGTSAPDY-PLQKKRHSFEYLR-SIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++        F+   TP++T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSLTAYAIHKFFQERGFVYVHTPLITGSDCEGAGEMFQVTTLDMNN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 VPKNADGTVDYSKDFFGKETNLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F + +D +   EN+L+ V            NF                   
Sbjct: 244 FWMIEPEIAFADLEDDMILAENMLKYVIRYVMENAPEEMNFFNSFVDKGLIDRLNNVVNS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG-YEVWAI 329
              R+ Y +AI             +       TEH  +    ++ + + V     E+ A 
Sbjct: 304 DFARVTYTEAIEILEKHNDKFEYKVSWGADLQTEHERYLTEEIYKRPVFVTDYPKEIKAF 363

Query: 330 PAKGGGGNR 338
             K    N+
Sbjct: 364 YMKMNDDNK 372



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 53/150 (35%), Gaps = 24/150 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +         ++ D+P     +E K        F M          ND     A  
Sbjct: 338 HERYLTEEIYKRPVFVTDYP-----KEIK-------AFYMKM--------NDDNKTVAAV 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    + ++     +G+     E  +G      + G   H G   
Sbjct: 378 DCLVPGIGEIIGGSQREDDYDKLVARMKELGLK----EEDYGFYLDLRKYGSTRHAGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R +M L G  N+R+V  FP + N C+L
Sbjct: 434 GFERCIMYLTGMSNIRDVIPFPRTVNNCEL 463


>gi|151942029|gb|EDN60385.1| lysyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
          Length = 591

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 106/263 (40%), Gaps = 15/263 (5%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIAKS----VRSEWVLC 72
             V ++G +H  R  G  + F  +  D   +  +    D    +  +     ++   ++ 
Sbjct: 122 EKVSIAGRIHAKRESGSKLKFYVLHGDGVEVQLMSQLQDYCDPDSYEKDHDLLKRGDIVG 181

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           ++G V      T       G++ +   ++++L+      LP        +  R++ R+LD
Sbjct: 182 VEGYV----GRTQPKKGGEGEVSVFVSRVQLLTPCL-HMLPADHFGFKDQETRYRKRYLD 236

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +       + R+ II  +R  +    FIE  TP++   +    A+ F+         
Sbjct: 237 LIMNKDARNRFITRSEIIRYIRKFLDQRKFIEVETPMMNVIAGGATAKPFITHHNDLDMD 296

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  AP+ + + L+  G DR ++I   FR+E       P EF   +   ++ +  D++
Sbjct: 297 MY-MRIAPELFLKQLVVGGLDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLM 354

Query: 251 NTMENVLRGVFEEFSNGNTVSNN 273
           +  E +   + +E +    +  +
Sbjct: 355 DMTELMFSEMVKEITGSYIIKYH 377



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 4/121 (3%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E E         F  PQ      K +        ++++     EI +     +       
Sbjct: 454 ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTELNDPFDQRA 513

Query: 507 AFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F      K+  ++           A + G+PP GG   GIDR+ M L  +  +REV LF
Sbjct: 514 RFEEQARQKDQGDDEAQLVDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLF 573

Query: 563 P 563
           P
Sbjct: 574 P 574


>gi|325270796|ref|ZP_08137387.1| lysine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324986912|gb|EGC18904.1| lysine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 578

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 109/274 (39%), Gaps = 10/274 (3%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F +I+D  G  QV    D  C    K + ++    +  +  
Sbjct: 52  REVVIAGRMMGRRVMGKASFAEIQDSKGRIQVYITRDDICPGEDKDLYNKVFKKLLDIGD 111

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFKYRFLD 132
               +        G+I + A++I +LS + +    V  +      +      R++ R++D
Sbjct: 112 FIGVKGFVFKTQMGEISVHAKEITLLSKSLKPLPVVKYKDGEAYDKFEDPEQRYRQRYVD 171

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +  +    +KR  ++ +MR       + E  TP L +      AR F+         
Sbjct: 172 LVVNDGVKDTFLKRATVLRTMRRFFDEAGYTEVETPTLQSIPGGASARPFITHFNALNID 231

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + ++
Sbjct: 232 MY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRFHNP-EFTCMELYVQYKDYNWMM 289

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           +  E +L  +  E +    V      I +    R
Sbjct: 290 SFTEQLLEKICTEVNGKPEVQMGDKTISFKAPFR 323



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 9/145 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+A+     +      + F
Sbjct: 379 EGTFIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERF 438

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +     +  ++          RA Q GMPP  GI  GIDR+VML+ G + ++EV LFP 
Sbjct: 439 LDQMHLADKGDDEAMIIDRDFLRALQYGMPPTSGIGIGIDRLVMLMTGKEYIQEVLLFPQ 498

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGL 589
            +         P + SV++  ELG+
Sbjct: 499 MK----PEPKIPQS-SVKEWAELGV 518


>gi|315917959|ref|ZP_07914199.1| asparaginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC
           25563]
 gi|313691834|gb|EFS28669.1| asparaginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 461

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 68/372 (18%), Positives = 129/372 (34%), Gaps = 61/372 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
           +   V+L  WV ++R      FL+I D       QVV +     F+    +     + ++
Sbjct: 15  IDKEVKLGAWVRKIRSQKNFGFLEINDGSFFYGIQVVFDTSLENFDEISRLSIASSVIVE 74

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++              + E+ A K+E+   A+ L  P+  +R   E +R K   L  R
Sbjct: 75  GTLVKSEGAG-------QEFEIKASKVEVCQKAD-LDYPLQNKRHSFEFLRTKS-HLRAR 125

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +T       R+    ++      +NF+   TPI+T+S  EGA +    + ++       
Sbjct: 126 TNTFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITSSDAEGAGEMFRITTLDLNNVPKN 185

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q       + F   +   P FR E   + R   EF+ +
Sbjct: 186 EDGSINFQKDFFGKSTNLTVSGQLNGETYCAAFRNIYTFGPTFRAEYSNTARHASEFWMI 245

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + EM+F + +  ++  E +++ +            NF                      R
Sbjct: 246 EPEMAFADLEVNMDIAEKMVKYIIRYVMETCPEEMNFFNQFIEKGLFDKLNNVLNNDFGR 305

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           + Y +AI            P+   +   +EH  +     F K + +    +         
Sbjct: 306 LTYTEAIDILEKSGKKFEYPVKWGIDLQSEHERYLAEEHFKKPVFLVDYPKDI------- 358

Query: 335 GGNRAFCDRMNE 346
              +AF  ++NE
Sbjct: 359 ---KAFYMKLNE 367



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 57/147 (38%), Gaps = 26/147 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  +++D+P        K I      F M           D  +++A  
Sbjct: 336 HERYLAEEHFKKPVFLVDYP--------KDIKA----FYMK-------LNEDGKTVRAM- 375

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+     EI  G  R    E++    + +G+ K      +       + G  PH G  
Sbjct: 376 -DLLAPQIGEIIGGSQREDNLEILETRMNELGMDK----EDYSFYLDLRKYGSFPHSGYG 430

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G +R++M L G  N+R+V  FP + N
Sbjct: 431 LGFERMIMYLTGMANIRDVIPFPRTPN 457


>gi|240949702|ref|ZP_04754037.1| asparaginyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240295960|gb|EER46636.1| asparaginyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 467

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 74/404 (18%), Positives = 135/404 (33%), Gaps = 56/404 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSA 57
           M ++ T S    G   VG  + + GWV   R    G+ FL + D       Q + N D A
Sbjct: 1   MSKFPTISEVLSGKVAVGEEISVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDLA 60

Query: 58  CF-EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
            + +    + +   + + G+++   AE          +EL A+ +E++   E+       
Sbjct: 61  NYQDEVLRLTAGCSVIVTGVIVESPAEGQA-------VELQAKSVEVVGWVEDPDTYPMA 113

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + +      +   L  R + +      R  +  ++      + F   +TP++TAS  EG
Sbjct: 114 AKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEG 173

Query: 177 ARDFLVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPC 219
           A +    S ++                 F+          Q      A    + +   P 
Sbjct: 174 AGEMFRVSTLDLENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKVYTFGPT 233

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------- 266
           FR E+  + R   EF+ ++ E +F    D     E++L+ VF                  
Sbjct: 234 FRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFHAVLEERKDDLKFFEKHV 293

Query: 267 --------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK 316
                    N ++++F +I Y DAI        +   P+   +   +EH        F  
Sbjct: 294 DNTVISRLENFINSDFAQIDYTDAIEVLLKSGKEFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + V    +            R   D     A     PG+  I 
Sbjct: 354 PVVVKNYPKDI-----KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+ +    +G++       +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDKRMVEMGLNP----EDYWWYRDLRR 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                H G   G +R+++ + G +N+REV  FP +  
Sbjct: 427 YDTVQHSGFGLGFERLIVYVTGLQNIREVIPFPRTPR 463


>gi|157736905|ref|YP_001489588.1| lysyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166980066|sp|A8ESJ5|SYK_ARCB4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157698759|gb|ABV66919.1| lysyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 504

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 57/266 (21%), Positives = 108/266 (40%), Gaps = 7/266 (2%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D      ++G +   R  G   FL I D  G+ Q+    D+        V  + +    G
Sbjct: 53  DENRNYTVAGRIKFFRLMGKASFLKIEDESGMLQIYVARDNLPENFYNEVFKKNIEV--G 110

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++  S          G++ L A  ++IL+ A   PLP        + +R++ R+LDL  
Sbjct: 111 DIIEISGYPFVTGH--GELSLHADSLKILTKAIS-PLPEKFHGIQDKELRYRQRYLDLIM 167

Query: 136 D-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           +  + K    R+++I+  R     + F+E  TP++   +        V      G    L
Sbjct: 168 NSEVRKTFHIRSKVISLTRRFFENKGFLEVETPMMHPIAGGANAKPFVTHFNALGVDRFL 227

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+  F+I   FR+E   +   P EF  ++   ++    D++   +
Sbjct: 228 RIAPELYLKRLIVGGFEAVFEINRNFRNEGMDATHNP-EFTSIEFYWAYKTYKDLIVLTK 286

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYD 280
                +FE  +    +     +I ++
Sbjct: 287 EYFEYLFENLNLPTILPYGEFKIDFN 312



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 49/157 (31%), Gaps = 27/157 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
              +  +  E   +        +I ++P               +P          L    
Sbjct: 358 GQLQGELFDEF--VEAKLINPTFITEYP------------VEISPLARRSDEKPHLTD-- 401

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS----NVGISKEVVENRFGGLYRAF 529
                  +++L   G EIA+     +     LQ F           +           A 
Sbjct: 402 -------RFELFIAGKEIANAFSELNDPIDQLQRFEGQIAAKEAGDDEAHEMDEDFVNAL 454

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             GM P  G   GIDR+VM+L    ++R+V LFP  +
Sbjct: 455 SYGMAPTAGQGIGIDRLVMMLTNEHSIRDVLLFPAMK 491


>gi|323339824|ref|ZP_08080093.1| asparagine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323092697|gb|EFZ35300.1| asparagine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 433

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 71/337 (21%), Positives = 129/337 (38%), Gaps = 38/337 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEW 69
               V   V++  W+   R  G I FL +RD         V +N     F++AK ++ E 
Sbjct: 9   SKDYVDQKVKIGVWLTNKRSSGKIAFLQLRDGTAYFQGVVVKSNVSEETFKLAKELKQET 68

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G +   +             E+  + IE++  +E  P+     +E+       +R
Sbjct: 69  SMYVVGTIHEDTRSHF-------GYEIEIEDIEVVGESENYPITP---KEHGTDFLMDHR 118

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +I +       E FI+   PILT S+PEG  +       ++ 
Sbjct: 119 HLWLRSKRQFAVMKIRNEVIRATYEFFNKEGFIKLDAPILTGSAPEGTTELFHTEYFDKD 178

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y +   A  + + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ 
Sbjct: 179 AY--LSQSGQLY-EEAGAMAYGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEES 235

Query: 250 LNTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGT--DKP 291
           L   E  +  + +   +                       + RI YD+AI       + P
Sbjct: 236 LEIQERYIAYLVQNVLDHCDYELGILGRDRDVLKRYTELPYPRISYDEAIDLLKESGEFP 295

Query: 292 DLRNPIIMHNVTE----HFVHSEFRVFSKILSVNPGY 324
           D++      +  E            V +   ++ P Y
Sbjct: 296 DVKWGEDFGSPEETYLAEHFSKPVFVMNYPKAIKPFY 332



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 50/138 (36%), Gaps = 16/138 (11%)

Query: 439 DFPFYEWNEE----EKKIDFAHN---PFTMPQGGMES---LKGNDLLSIKAFQYDLVCN- 487
           +FP  +W E+    E+     H     F M          +K +          DL+   
Sbjct: 293 EFPDVKWGEDFGSPEETYLAEHFSKPVFVMNYPKAIKPFYMKPHPTRDDVVICADLLAPE 352

Query: 488 -GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
              EI  G  R+   E + +     G++K+  E          + G  PH G   G++R 
Sbjct: 353 GYGEIIGGSERSTDPEYLEEQIVKAGLNKDDYE----WYLDLRRYGSVPHSGFGLGLERC 408

Query: 547 VMLLLGAKNVREVSLFPM 564
           +  L G  ++RE   FP 
Sbjct: 409 ITWLTGEDHIREAIPFPR 426


>gi|302384563|ref|YP_003820385.1| asparaginyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302195191|gb|ADL02762.1| asparaginyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 463

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 58/337 (17%), Positives = 112/337 (33%), Gaps = 33/337 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWV 70
             S + S V + GWV  +R      F+ + D      +    +     F     +     
Sbjct: 13  KESLLNSQVTVGGWVRSLRDSKAFGFIVLNDGTYFETLQIVYHNTMDNFSEISKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A+KI +   +     P+  +R   E +R     
Sbjct: 73  IIVTGTLVATPD-------AKQPFEIQAEKITVEGASAPDY-PLQKKRHSFEYLR-TISH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ I  ++       +F+   TPI+T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSLIAYAIHQFFQERDFVYVHTPIITGSDCEGAGEMFQVTTLDLTN 183

Query: 190 -------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+  P       Q      A  F   +   P FR E+  + R   E
Sbjct: 184 IPKTEEGAVDFTQDFFGKPTNLTVSGQLNGETYAMAFRNIYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI-----RRYGT 288
           F+ ++ EM+F +  D +   E++L+ V            NF     D  +         +
Sbjct: 244 FWMIEPEMAFADLSDNMELAESMLKYVIRYVLEHAPEEMNFFNQFVDKELLNRLNHVLNS 303

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
           +   +     +  + +H    +++VF           
Sbjct: 304 EFAHVTYTEAIALLEKHNDEFDYKVFWGCDLQTEHER 340



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 52/139 (37%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P     +E K        F M           D  ++ A    LV    EI 
Sbjct: 349 KPVFVTDYP-----KEIK-------AFYMKM-------NPDNKTVAAVDC-LVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + ++     +G+ K      +       + G   H G   G +R VM L G
Sbjct: 389 GGSQREDDYDKLVARMDELGLRK----EDYDFYLDLRKFGSTRHAGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N C+L
Sbjct: 445 MSNIRDVVPFPRTVNNCEL 463


>gi|16081630|ref|NP_393995.1| asparaginyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|20139925|sp|Q9HKS7|SYN_THEAC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|10639687|emb|CAC11659.1| probable asparaginyl--tRNA synthetase [Thermoplasma acidophilum]
          Length = 429

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 11/263 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             + VGS V + GWV+R+R  GG+ F+ +RD  GI Q  A  +    ++  ++     L 
Sbjct: 9   TKAYVGSKVSIRGWVYRIRSSGGVTFVVVRDSSGIIQCTARKNELPEDVYDTI---SSLG 65

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I+  V        +    +G  E++     +    +  P+     ++  E      R L 
Sbjct: 66  IESSVEFHGTLKEDRRSPSG-YEIAVDSFRVYQKNDVFPIT----KDQGEEFLLDNRHLW 120

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       +  R+ I  S         + +  TP + +++ EG            G   
Sbjct: 121 LRSREFTSVLKIRSTIFRSFADFFYENGYYQVQTPFMVSTAVEGGSTLFKVDFF--GEPI 178

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y + ++ S  ++ F IAP FR E  R+ R   E++  + E+++++ +++++ 
Sbjct: 179 YLNQSAQFYLETMIYS-LEKVFTIAPSFRAEKSRTRRHLTEYWHAEAEVAWIDNNEMMDI 237

Query: 253 MENVLRGVFEEFSNGNTVSNNFL 275
            E ++  +    +  N      L
Sbjct: 238 EERMIYYIVSRVTEDNEDELKML 260



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 66/227 (29%), Gaps = 34/227 (14%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIR------VRLDMQDGDSCFFIAGDPLKF 409
           +A+I            +  +   +   N + ++        L             + +K 
Sbjct: 226 VAWIDNNEMMDIEERMIYYIVSRVTEDNEDELKMLNRDPEVLKAMKPPFPRIRYSEIIKV 285

Query: 410 CSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
            +           +LG               ++ ++P        K +     PF MP  
Sbjct: 286 ANSIG-LPLKYGDDLGADEERQITMKYDRPIFVTNYP--------KDLK----PFYMPVD 332

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                +  +   +    Y       EI  G  R    + ++Q      +     E+ +  
Sbjct: 333 PENPGEVLNHDMLAPEGY------GEIIGGSQRIWNYDELMQRIREANLD----ESAYYW 382

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
                + G  PH G   G+DR+ M ++   N+RE   +P +      
Sbjct: 383 YVDLRKYGSVPHSGFGLGLDRLAMWIMHLDNIREAIPYPRTIRRTKP 429


>gi|291235466|ref|XP_002737659.1| PREDICTED: aspartyl-tRNA synthetase-like [Saccoglossus kowalevskii]
          Length = 532

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 70/361 (19%), Positives = 134/361 (37%), Gaps = 28/361 (7%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKS 64
             DL  +     V L   +H  R  G   F+ +R       G+  V      A  + A +
Sbjct: 82  IKDLNSTLAEKRVWLRARIHTSRSKGKQCFVVLRQQSYNVQGLVAVSQVVSKAMVKFAAN 141

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--- 121
           +  E ++ ++G+V     E+ +       +E+  +++ ++S +E        +   P   
Sbjct: 142 ITKESIVDVEGIVKEAKVESCSQK----DVEILIEQLYVVSASEPQLPLQLDDAVRPATE 197

Query: 122 ---------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                    +  R   R +DLR  T          +    R  ++ + F+E  TP +  +
Sbjct: 198 DDESRPTVHQDTRLDNRIIDLRTSTSQAIFRLEASVCQLFREVLMKQGFVEIHTPKMIGA 257

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + EG  +    S     ++ A  Q+PQ YKQ+++A+ FDR + I   FR ED  + R   
Sbjct: 258 ASEGGANVFTVSYFKTKAYLA--QSPQLYKQMVLAADFDRVWSIGSVFRAEDSNTHRHLT 315

Query: 233 EFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           EF  LD+EM+F     ++++ + ++   +F               +     +  +    P
Sbjct: 316 EFIGLDLEMTFYYHYHEVVDLIGDMFVQIFRGL--QERCKEEIDVVNKQYPMEPFKFLDP 373

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-DRMNEWARS 350
            LR  +  H        + F +  +     P  ++     K       F  D+     R 
Sbjct: 374 SLR--LEYHEGIRMLKEAGFDIGFQDDLSTPAEKLLGKLVKAKYDTDFFILDKYPLEVRP 431

Query: 351 Q 351
            
Sbjct: 432 F 432



 Score =  107 bits (267), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF            ND  S  +  YD+   G EI SG  R H  E++++  + 
Sbjct: 424 KYPLEVRPFYTMPD------PNDPKS--SNSYDMFMRGEEILSGAQRIHDPELLIERATE 475

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI  E ++        +F+ G PPH G   G++R+ ML LG  N+R+ SLFP       
Sbjct: 476 HGIGIESIKP----YIDSFRYGAPPHAGGGIGLERVTMLFLGLDNIRKTSLFPRDPKRLA 531

Query: 571 L 571
            
Sbjct: 532 P 532


>gi|254582983|ref|XP_002499223.1| ZYRO0E06908p [Zygosaccharomyces rouxii]
 gi|238942797|emb|CAR30968.1| ZYRO0E06908p [Zygosaccharomyces rouxii]
          Length = 594

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 109/262 (41%), Gaps = 13/262 (4%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIAKS----VRSEWVLC 72
             V ++G +H  R  G  + F  +  D   +  +    D    E  +     ++   ++ 
Sbjct: 122 EKVAIAGRIHAKRESGSKLKFYVLHGDGAEVQLMAQLQDYHDPEAYEKDHDLLKRGDIVG 181

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           ++G V      T       G++ +   +I++L+      LP        +  R++ R+LD
Sbjct: 182 VEGYV----GRTQPKKGGEGEVSVFVSRIQLLTPCL-HMLPADHFGFKDQETRYRKRYLD 236

Query: 133 LRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           L  +   +   + R++II+ +R  + ++NFIE  TP++   +        V    +    
Sbjct: 237 LIMNKGSRDRFITRSKIISFIRRFLDSKNFIEVETPMMNVIAGGATAKPFVTHHNDLDMD 296

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +  AP+ + + L+  G +R ++I   FR+E       P EF   +   +F +  D+++
Sbjct: 297 MYMRIAPELFLKELVVGGMERVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAFADVYDLMD 355

Query: 252 TMENVLRGVFEEFSNGNTVSNN 273
             E +   + +E +    +  +
Sbjct: 356 MTELLFSEMVKEITGSYEIKYH 377



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 44/121 (36%), Gaps = 4/121 (3%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E E         F  PQ      K +  +     ++++     EI +     +       
Sbjct: 454 ELEDTCINPTFIFGHPQMMSPLAKYSRDMPGLCERFEVFVATKEICNAYTELNDPFDQRA 513

Query: 507 AFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F      K+  ++           A + G+PP GG   GIDR+ M L  +  +REV LF
Sbjct: 514 RFEEQARQKDQGDDEAQLVDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLF 573

Query: 563 P 563
           P
Sbjct: 574 P 574


>gi|187917979|ref|YP_001883542.1| asparaginyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|119860827|gb|AAX16622.1| asparaginyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 461

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 69/369 (18%), Positives = 129/369 (34%), Gaps = 45/369 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           + + + + GW+   R +G I F++I D   I  + A  D    +  K    E+     G 
Sbjct: 14  LDTMITVKGWIRTKRSNGKISFVEINDGSNIKGIQAVIDEEDPQFEKQ---EFKKLTTGA 70

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            +S +   I +       E+   K  ++  A++    +  +R   E +R +   L +R +
Sbjct: 71  SISLTGILILSPAKGQAYEIKTTKFNVIGEADQETYLLQKKRHTFEFLR-EIPHLRIRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--------- 187
           T       R +I   +        F    TPI+T++  EGA +    S ++         
Sbjct: 130 TFGAVARIRNQISYKIHEYFQKNGFFYIHTPIITSNDGEGAGEIFRVSTLDLNNIAKGQE 189

Query: 188 ---QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
              +  F+   A      Q      A    + +   P FR E+  + R   EF+ ++ EM
Sbjct: 190 IDFKNDFFGKQAFLTVTGQLHGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWMIEPEM 249

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------------------NFLRICYD 280
           +F   +D +N  E+ L+ +  E  N                           NF  I Y 
Sbjct: 250 AFFTLEDNINLAEDFLKYILRETLNHCGQDMEFFDNFIEKGLIKKIEDVINSNFEVITYT 309

Query: 281 DAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSV---NPGYEVWAIPAKGGG 335
            AI++           P    ++ TEH  +    +  K  +V      ++ + +      
Sbjct: 310 QAIKKLENATKTFEIKPYWGMDLQTEHERYLTEEIIKKPTTVIDYPKEFKAFYMKMNEDN 369

Query: 336 GNRAFCDRM 344
                 D +
Sbjct: 370 KTVKGMDIL 378



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 49/147 (33%), Gaps = 26/147 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAF 480
            E  +      +   ++D+P                 F M      +++KG D+      
Sbjct: 336 HERYLTEEIIKKPTTVIDYP------------KEFKAFYMKMNEDNKTVKGMDI------ 377

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
              LV    EI  G  R    + + +    + +                + G  PH G  
Sbjct: 378 ---LVPRIGEIIGGSEREDNLDKLNKRIKELNLEV----ETLNWYLDLRRFGSTPHSGFG 430

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G++R++  + G  N+R+V  FP +  
Sbjct: 431 LGLERLIQYITGMANIRDVIPFPRTPK 457


>gi|328954383|ref|YP_004371717.1| Lysyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328454707|gb|AEB10536.1| Lysyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 493

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 60/270 (22%), Positives = 104/270 (38%), Gaps = 11/270 (4%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G    L+G +  +R  G   F   +D  G  Q          E     +   +  I G 
Sbjct: 54  LGQIFSLAGRLVLMRQFGKASFFHFQDDGGRLQGYIQRQEVGPEAYTFFKRLDLGDIVGF 113

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                         T ++ L  +   +L+ A   PLP           R++ R+LDL  +
Sbjct: 114 ------RGSLFRTKTNELTLQVKDFILLTKALR-PLPEKYHGLSDVERRYRQRYLDLFVN 166

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
              K + + R+RII  +R  M    F+E  TP++        AR F     V     Y L
Sbjct: 167 PEVKGVFRARSRIIRLVRDFMEQREFLEVETPMMQPIPGGATARPFQTYHNVLAMPLY-L 225

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   ++   +D++   E
Sbjct: 226 RIAPELYLKRLLVGGFERVFEINRSFRNEGVSTQHNP-EFTMMEFYQAYATYEDLMMLTE 284

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            +   +  + + G  +     +I      +
Sbjct: 285 EMFGQIATQITGGRQIDYQGHKIDLTPPWQ 314



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 59/151 (39%), Gaps = 26/151 (17%)

Query: 418 NHIAQELGI-INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             +A+   + +     +  +I  FP               +P +        L       
Sbjct: 358 RAMAKLFDLHVEPKLIQPTFITGFP------------VEISPLSRRNQVNPEL------- 398

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCG 532
             A +++L   G EIA+G    +  +   Q F     ++E   +          RA + G
Sbjct: 399 --ADRFELFIAGKEIANGFSELNDPDDQRQRFLKQVAAREAGNDEAHFMDEDFVRALEYG 456

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP  G   GIDR+VMLL  + ++R+V LFP
Sbjct: 457 MPPAAGEGIGIDRLVMLLTDSASIRDVILFP 487


>gi|288924875|ref|ZP_06418812.1| lysine--tRNA ligase [Prevotella buccae D17]
 gi|288338662|gb|EFC77011.1| lysine--tRNA ligase [Prevotella buccae D17]
          Length = 584

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 109/274 (39%), Gaps = 10/274 (3%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F +I+D  G  QV    D  C    K + ++    +  +  
Sbjct: 53  REVVIAGRLMGRRVMGKASFAEIQDSKGRIQVYIARDEICPGENKDLYNKVFKKLLDIGD 112

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFKYRFLD 132
               +       TG+I + A+ + +LS + +    V  +      +     +R + R++D
Sbjct: 113 FIGVKGFVFRTQTGEISVHAKSLTLLSKSLKPLPVVKYKDGVAYDKFDDPEMRARQRYVD 172

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +  +    +KR  ++ +MR       + E  TP L + +    AR F+         
Sbjct: 173 LVVNEGVKDTFLKRATVLRTMRRFFDEAGYTEVETPTLQSIAGGASARPFITHFNALNVD 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + ++
Sbjct: 233 MY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKYHNP-EFTCMELYVQYKDYNWMM 290

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
              E +L  +    +    V N    I +    R
Sbjct: 291 AFTERLLETICTAVNGTTEVKNGDNVISFKAPFR 324


>gi|407668|gb|AAD12351.1| unknown [Mycoplasma genitalium]
          Length = 177

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 56/169 (33%), Positives = 93/169 (55%), Gaps = 4/169 (2%)

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           RN +   L I+  N + FCW++DFP Y+++E+  +    HN F+ P+        ++   
Sbjct: 5   RNELKYHLDIVKPNQYSFCWVVDFPLYDFDEKTNQWISNHNIFSKPKQEWIDNFESNKNE 64

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             + Q+DLV NGFEI SG IR +   V  +  +++ I      N+F  L  A+Q G P H
Sbjct: 65  ALSEQFDLVLNGFEIGSGSIRINDPIVQKRLMNSLNIDP----NKFAFLLEAYQYGAPVH 120

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
           GG+  GIDR++M+L    N+REV  FP + +  ++   +P  +  E+++
Sbjct: 121 GGMGLGIDRLMMILNQTDNIREVIAFPKNNHGIEVHTNAPDKIDKEEVK 169


>gi|331002360|ref|ZP_08325878.1| asparaginyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330410176|gb|EGG89610.1| asparaginyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 463

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 122/375 (32%), Gaps = 51/375 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               + + + + GWV   R      FL I D       QVV N     F     V     
Sbjct: 13  REKYIDTEITIGGWVRSNRDSKTFGFLVISDGSYFEQIQVVYNDTLPDFNKLTKVNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L I G +++               E+ A  I+I   +     P+  +R   E +R     
Sbjct: 73  LIIKGTLVATPD-------AKQPFEIQATHIDIEGESGSDY-PLQKKRHTLEYLR-TISH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-- 188
           L  R +T       R+ I  ++       +F+   TPI+T S  EGA +    +  +   
Sbjct: 124 LRPRTNTFQAVFRVRSLIAYAIHKFFQERDFVYVHTPIITGSDAEGAGEMFRVTTFDPAN 183

Query: 189 ------------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 PVLNDDGSVDFSKDFFGKETNLTVSGQLNGETFAMAFRNIYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSN 272
           F+ ++ E +F + DD ++  E++L+ +                            N V +
Sbjct: 244 FWMIEPEFAFGDLDDNMDLAESMLKYIINYVLENASLEIEFFNQFVDKGLLDRLKNVVES 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           +F RI Y +AI     +  +    +       TEH      +VF K + V    +     
Sbjct: 304 DFGRITYTEAIDILKKNNDNFEYKVSWGCDLQTEHERFLTEQVFKKPIFVTDYPKDIKAF 363

Query: 331 AKGGGGNRAFCDRMN 345
                 ++     M+
Sbjct: 364 YMKENDDKKTVAAMD 378



 Score = 77.8 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 50/150 (33%), Gaps = 24/150 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +  ++ D+P        K I      F M        K ND     A  
Sbjct: 338 HERFLTEQVFKKPIFVTDYP--------KDIKA----FYM--------KENDDKKTVAAM 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R      +L     +G+        +       + G   H G   
Sbjct: 378 DCLVPGIGEIIGGSQREDDYNKLLSRIEELGMKP----EDYDFYLDLRKYGSTRHAGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R VM L G  N+R+V  FP +   C+L
Sbjct: 434 GFERCVMYLTGMSNIRDVLPFPRTVGNCEL 463


>gi|145636232|ref|ZP_01791902.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145270754|gb|EDK10687.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 467

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 74/429 (17%), Positives = 137/429 (31%), Gaps = 68/429 (15%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 17  IGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYESEILRLTTGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   +E          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGKVVESPSEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           N V+++F
Sbjct: 250 MVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENFVNSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH        F   + V    +       
Sbjct: 310 AQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
                R   D     A     PG+  I            +G   +   +   +     + 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEI------------IGGSQREERLDVLDKRMEEMG 412

Query: 393 MQDGDSCFF 401
           +   D  ++
Sbjct: 413 LNPDDYWWY 421



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+ +    +G++ +             +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDKRMEEMGLNPDDYW----WYRDLRK 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 427 YGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPR 463


>gi|241896120|ref|ZP_04783416.1| asparaginyl-tRNA synthetase [Weissella paramesenteroides ATCC
           33313]
 gi|241870634|gb|EER74385.1| asparaginyl-tRNA synthetase [Weissella paramesenteroides ATCC
           33313]
          Length = 431

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 70/313 (22%), Positives = 123/313 (39%), Gaps = 32/313 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRS 67
           +   + VG  VRL  W+   R  G + FL +RD     Q V        EI   AK++  
Sbjct: 7   EDAKNYVGQEVRLGAWLRNKRGSGKMQFLQLRDGTAFFQGVVVKSVVGEEIFAKAKALSQ 66

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           E  + + G +++               E+  + + ++  +E  P+     +E+       
Sbjct: 67  ETSMYLIGTIVADERSPF-------GYEMQVKDLTVVGSSENYPITP---KEHGTDFLMD 116

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +R L LR       +  R  +I +       E FI+  +P+LT S+PEG  +        
Sbjct: 117 HRHLYLRHIQPFAVLRIRNTLIAATYEFFNKEGFIKIDSPLLTGSAPEGTTELFHTEYFE 176

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
             ++  L Q  Q Y     A  F R F   P FR E  ++ R   EF+ ++ EM+++ Q+
Sbjct: 177 DDAY--LSQTGQLY-AEAGAMAFGRVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAWMTQE 233

Query: 248 DILNTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKP 291
           D L   E  +  + +   + N                     + R+ YDDAI+    +  
Sbjct: 234 DSLKIQERYIAYLIQSVLDRNEYELDLLGRDKELLKSYTQLPYPRVSYDDAIKLLQENDF 293

Query: 292 DLRNPIIMHNVTE 304
           D++  +   +  E
Sbjct: 294 DVKWGVDFGSPEE 306



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 52/136 (38%), Gaps = 22/136 (16%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +I +FP     +E K      +P        + +   DLL+ + +         EI 
Sbjct: 315 KPVFITNFP-----KEIKAFYMKRHP-----DRDDVVISADLLAPEGYG--------EII 356

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R+   + + +     G+      + +       + G  PH G   G++R V  + G
Sbjct: 357 GGSERDTDFDYLEKRIKEQGLDI----DEYSWYLDLRKYGSVPHSGFGLGLERAVTWITG 412

Query: 553 AKNVREVSLFPMSQNF 568
            +++RE   FP + N 
Sbjct: 413 EEHIREAIPFPRTMNR 428


>gi|206579329|ref|YP_002239422.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|206568387|gb|ACI10163.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 466

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 125/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    G  FL + D      V A  +++     + V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGFSFLAVYDGSCFDPVQAVINNSLPNYNQEV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A  +E+    E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASQGQGQSFEIQATSVEVTGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++  +     
Sbjct: 132 NLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 196 QA-----------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           Q                    Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +D+    E +L+ VF+                            VS +F ++
Sbjct: 252 PEVAFASLNDVAGLAEAMLKYVFKAVLEERADDMQFFAERVDKDAIDRLQRFVSADFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVTILENCGKQFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|157375499|ref|YP_001474099.1| asparaginyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189083481|sp|A8FVU8|SYN_SHESH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|157317873|gb|ABV36971.1| asparaginyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 466

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 70/389 (17%), Positives = 123/389 (31%), Gaps = 58/389 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVL 71
           +GS V + GWV   R    GI FL + D      +      + ++   EI K      V+
Sbjct: 16  IGSQVTVRGWVRSRRDSKAGISFLAVYDGSCFDPIQGVVPNSLENYNDEILKLTAGCSVV 75

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G V+    +           EL    +E+    E+        + +      +   L
Sbjct: 76  M-TGEVVDSPGKGQA-------FELQVSSVEVAGWVEDPDTYPMAAKRHSIEHLRELAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--- 188
             R + +      R  +  ++      + FI  STP++TAS  EGA +    S ++    
Sbjct: 128 RPRTNIIGAVARVRNSLSQAIHRFYHEQGFIWVSTPLITASDAEGAGEMFRVSTLDMENL 187

Query: 189 -----------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q      AS   + +   P FR E+  + R   EF
Sbjct: 188 PRNDEGKVDYSEDFFGKESFLTVSGQLNAETYASALSKVYTFGPTFRAENSNTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ E++F + DD+    E +L+  F+           F                    
Sbjct: 248 WMVEPEVAFADLDDVAGLAEQMLKFCFKAVLEERRDDLEFFAQRVDKTVIDRLESFVSSD 307

Query: 276 --RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
             ++ Y DA+    +       P+   +   +EH  +     F   + V    +      
Sbjct: 308 FAQVDYTDAVEILKSCGKKFEYPVEWGIDLQSEHERYLAEEHFKAPVVVKNYPKDI---- 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 364 -KAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 6/99 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+      + +SK      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGAQREERLDVLDARLEEMNLSK----EDYWWYRDMRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G  PH G   G +R+V  + G  N+R+V  FP +    
Sbjct: 426 YGTVPHSGFGLGFERLVSYVTGVSNIRDVIPFPRAPKSA 464


>gi|116618476|ref|YP_818847.1| asparaginyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116097323|gb|ABJ62474.1| asparaginyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 435

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/307 (21%), Positives = 121/307 (39%), Gaps = 32/307 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCI 73
           VG  V +  W+ + R  G I FL +RD           A+     FE AKS++ E  + +
Sbjct: 17  VGKTVTIGAWLRQKRGSGKIAFLQLRDGTAFFQGVVAKADVSEEVFETAKSLKQETSIYV 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +  +          E++   I+++  + + P+     +E+     F  R L L
Sbjct: 77  TGEIHEDARSSF-------GYEMAVSDIKVIGESHDYPITP---KEHGTEFLFDERHLYL 126

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  ++ +       E F +   P+LT S+PEG  +        + +F  
Sbjct: 127 RHLKPFATLKIRNTLVAATYEFFNKEGFTKLDAPVLTGSAPEGTTELFETDYFGEPAF-- 184

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM+F++Q++ L   
Sbjct: 185 LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAFMDQEESLKLQ 243

Query: 254 ENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           E  +  +  +    N                     + R+ YDDA++    +  D+   +
Sbjct: 244 ERYIAFLISKVLENNDQELDILKRDKGLLRSYTQLPYPRVSYDDAVKLLQDNDFDVEWGV 303

Query: 298 IMHNVTE 304
              +  E
Sbjct: 304 DFGSPEE 310



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 53/157 (33%), Gaps = 29/157 (18%)

Query: 426 IINCNCFEFCWIMDF--------------PFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           ++  N F+  W +DF              P +  N        A  PF M +        
Sbjct: 291 LLQDNDFDVEWGVDFGSPEETFLANHFAKPVFIVN-----FPKAIKPFYMKRHKTRDDIV 345

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
                +    Y       EI  G  R+   + +      +G++     + +       + 
Sbjct: 346 VSADLLAPEGY------GEIIGGSERDTDYDYLKNEIEKLGLNM----DEYAWYLDLRKY 395

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           G  PH G   G++R+V  + G +++RE   FP   N 
Sbjct: 396 GSVPHSGFGLGLERMVTFVTGEEHIREAIPFPRMTNR 432


>gi|325264319|ref|ZP_08131050.1| asparagine--tRNA ligase [Clostridium sp. D5]
 gi|324030390|gb|EGB91674.1| asparagine--tRNA ligase [Clostridium sp. D5]
          Length = 463

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 61/376 (16%), Positives = 122/376 (32%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWV 70
               +   V + GW+  +R      F+ + D      +    +     FE          
Sbjct: 13  KEEYLDKKVTVGGWIRSIRDSKTFGFIVVNDGSYFEPLQIVYHDSMENFEEVSKQNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A ++ I   +     P+  +R   E +R     
Sbjct: 73  IIVTGTLVATPQ-------AKQPFEIQADEVTIEGTSAPDY-PLQKKRHSFEYLR-TISH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ I  ++        F+   TP++T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSMIAFAIHQFFQDRGFVYVHTPLITGSDCEGAGEMFRVTTLDMDN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 VPKNPDGTIDYSQDFFGKETNLTVSGQLNGETFAQAFRSIYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSN 272
           F+ ++ E++F + DD ++  E +L+ V                            N  ++
Sbjct: 244 FWMIEPEIAFADLDDNMDLAEAMLKYVISYVLENAPEEMNFFNSFVDKGLMDRLKNVENS 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           +F R+ Y +A+     +       +       TEH  +    V+ + + V    +     
Sbjct: 304 DFARVTYTEAVELLEKNNDKFEYKVTWGTDLQTEHERYLTEEVYKRPVFVTDYPKEI--- 360

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  ++NE
Sbjct: 361 -------KAFYMKLNE 369



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 53/150 (35%), Gaps = 24/150 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +         ++ D+P     +E K        F M           D  ++ A  
Sbjct: 338 HERYLTEEVYKRPVFVTDYP-----KEIK-------AFYMK-------LNEDGKTVAAVD 378

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    + ++Q    + +     E  +       + G   H G   
Sbjct: 379 C-LVPGIGEIIGGSQREDDYDKLVQRMKEMNLG----EEDYKFYLDLRRYGSTRHAGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R VM L G  N+R+V  FP + N C+L
Sbjct: 434 GFERCVMYLTGMSNIRDVVPFPRTVNNCEL 463


>gi|256820313|ref|YP_003141592.1| lysyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581896|gb|ACU93031.1| lysyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 562

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 58/289 (20%), Positives = 114/289 (39%), Gaps = 20/289 (6%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           + G  V ++G +  +R  G   F  ++D  G  Q+  N D  C    K++ +E    +  
Sbjct: 43  EEGKQVVVAGRLMSLRVQGKASFATLQDSEGTMQLYFNRDEMCPTDDKTLYNEVFKKLLD 102

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKY 128
           L     AE        G+  +  +   +LS           + +            R++ 
Sbjct: 103 LGDFIGAEGTLFITKMGEKTVLVKNFTLLSKVLRPLPMPKVDADGKVHDAFTDPEQRYRM 162

Query: 129 RFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R++DL  +   K   +KRT++ N+MR       ++E  TPIL A      AR F+     
Sbjct: 163 RYVDLVVNPQVKEVFIKRTKLFNAMRQFFNDAGYLEVETPILQAIPGGASARPFITHHNA 222

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ + 
Sbjct: 223 LDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKDY 280

Query: 247 DDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY 286
             +++  E ++       +                 + R+   DAI+++
Sbjct: 281 HWMMDFTERLIEHCAMAVNGTTKATFGKHTVDFKAPYPRLTMTDAIKQF 329



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 8/113 (7%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           P  M     E     DL      +++L+  G EIA+     +      + F       E 
Sbjct: 385 PKEMSPLTKEHRDNPDL----TERFELMVCGKEIANAYSELNDPIDQRERFEEQLRLSEK 440

Query: 518 VENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            ++          RA + GMPP  G+  G+DR+VM L   ++++EV  FP  +
Sbjct: 441 GDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLVMFLTNNESIQEVLFFPQMR 493


>gi|60683235|ref|YP_213379.1| asparaginyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|81313713|sp|Q5L8W2|SYN_BACFN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|60494669|emb|CAH09470.1| asparaginyl-trna synthetase [Bacteroides fragilis NCTC 9343]
          Length = 467

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 59/295 (20%), Positives = 108/295 (36%), Gaps = 29/295 (9%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     +   D G+ V + GWV   R    + F+ + D   I  V    D A F
Sbjct: 1   MEKISRTKIVDLMKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQVVVDLANF 60

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+ K + +   L ++G++         A       E+ A++IE+L   +        +
Sbjct: 61  DEEMLKQITTGACLSVNGVLTESVGAGQKA-------EVQAREIEVLGTCDNTYPLQ--K 111

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           + +      +   L  R +T       R  +  ++      + F    TPI+TAS  EGA
Sbjct: 112 KGHSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGA 171

Query: 178 RDFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
                 + +N                 F+    +     Q +  L A+     +   P F
Sbjct: 172 GQMFQVTTMNLYDLKKDANGSIVYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F E  + ++  E  ++       +       FL
Sbjct: 232 RAENSNTPRHLAEFWMIEPEVAFNEIQENMDLAEEFIKYCVRWALDNCADDVKFL 286



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 4/87 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L     EI  G  R      ++     + I  + +           + G  PH G   G 
Sbjct: 384 LFPKIGEIIGGSERESDYNKLMTRIEEMHIPMKDMW----WYLDTRKFGTCPHSGFGLGF 439

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +R+++ + G  N+R+V  FP +    D
Sbjct: 440 ERLLLFVTGMSNIRDVIPFPRTPRNAD 466


>gi|295104508|emb|CBL02052.1| asparaginyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 462

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 62/348 (17%), Positives = 120/348 (34%), Gaps = 49/348 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ + + GW   +R    I F+ + D      +    +      A  + +   +   GL 
Sbjct: 17  GTEITVCGWAKNIRDSKNIGFIALSDGGCFKTLQIVLE------AGKLANYDEVIHTGLY 70

Query: 78  --MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +    + +         EL+A+ +EIL        P+  ++   E +R     L  R 
Sbjct: 71  SSLRIKGKLVLTPQAKQPFELNAESVEILGDCPADEYPLQKKKMSMEYLR-TMPTLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           +T +     R+    ++        F+   +P++TAS  EGA +    + ++        
Sbjct: 130 NTFNAAFRVRSVAAYAIHKFFQENGFVYAHSPLITASDCEGAGEMFRVTTLDLDNLPKTE 189

Query: 190 --------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+  P       Q +   MA  F + +   P FR E   + R   EF+ ++
Sbjct: 190 DGAVDYSKDFFEKPVNLTVSGQLEAEAMAMAFGKVYTFGPTFRAEKSFTTRHAAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            EM+F + +  ++  E +++ V     +       F                      RI
Sbjct: 250 PEMAFCDLNGYMDNAEAMIKYVIRYVLDNCPDEMAFFNQFIDKGLVERLELVANSEFARI 309

Query: 278 CYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
            Y +AI     +    + P+       TEH  +    V+ K + V   
Sbjct: 310 SYTEAIEILKKNNKKFQYPVEWGVDIQTEHERYLTEVVYKKPVFVTDY 357



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 47/136 (34%), Gaps = 24/136 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P     +E K        F M Q               A    LV    E+ 
Sbjct: 350 KPVFVTDYP-----KEIKS-------FYMKQNAD--------GKTVAAADMLVPGIGELI 389

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R      ++     +G+ K   E          + G   H G   G +R++M L G
Sbjct: 390 GGSQREEDYGKLVARMDELGMDKTNYE----WYLNLRKFGGVEHAGYGLGFERMIMYLTG 445

Query: 553 AKNVREVSLFPMSQNF 568
            +N+R+V  FP +   
Sbjct: 446 IQNIRDVLPFPRTAYG 461


>gi|239631431|ref|ZP_04674462.1| asparaginyl-tRNA synthetase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|239525896|gb|EEQ64897.1| asparaginyl-tRNA synthetase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
          Length = 432

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/310 (21%), Positives = 116/310 (37%), Gaps = 32/310 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
              V   V++  W+   R  G I FL +RD           A+     F +AK +R E  
Sbjct: 11  KEHVNEEVKIGAWLTDKRSSGKIAFLQLRDGSAYFQGVVSKADVPEDVFSLAKELRQESS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I G++   S             E+  + IE++  + + P      +E+       +R 
Sbjct: 71  MWITGVIHQDSRSHF-------GYEIEVRNIELVGDSHDYP---ISPKEHGIEFLLDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR          R  +I +       E FI+   PILT S+PEG  +       ++ +
Sbjct: 121 LWLRSKRQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEGTTELFETDYFDKKA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y     A  + + F   P FR E  ++ R   EF+ ++ EM+F  Q++ L
Sbjct: 181 Y--LSQSGQLY-AEAGAMAYGKVFTCGPVFRAEKSKTRRHLTEFWMIEPEMAFCHQEESL 237

Query: 251 NTMENVLRGVFEEFSNGNTVSNN----------------FLRICYDDAIRRYGTDKPDLR 294
              E  +  + +   +      +                + RI Y  AI+       D++
Sbjct: 238 KVQERYVAYLVQSVLDNCAYPLHLLDRDPEVLKQYTKLPYPRITYKQAIKMLQDAGMDVK 297

Query: 295 NPIIMHNVTE 304
                 +  E
Sbjct: 298 YGDDFGSPEE 307



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 19/135 (14%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTM--PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           D P +  N           PF M       +     D+L+ + +         EI  G  
Sbjct: 315 DQPVFVLN-----YPKTIKPFYMLTDPEDDQQYVCADMLAPEGYG--------EIIGGSE 361

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R    + +  A  + G+  +  E          + G  PH G   G++R +  +    ++
Sbjct: 362 RETDYDTLKNAIEHAGLDLDEYE----WYLDLRKYGSVPHSGFGLGLERAITWVCKLDHL 417

Query: 557 REVSLFPMSQNFCDL 571
           RE   FP   N    
Sbjct: 418 REAIPFPRMINRLKP 432


>gi|33152476|ref|NP_873829.1| asparaginyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|59798581|sp|Q7VLL7|SYN_HAEDU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|33148699|gb|AAP96218.1| asparaginyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 467

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 74/404 (18%), Positives = 134/404 (33%), Gaps = 56/404 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSA 57
           M ++ T S    G   VG  V + GWV   R    G+ FL + D       QV+ N D A
Sbjct: 1   MSKFPTVSEILSGKIVVGEKVTVRGWVRTRRDSKAGLSFLTVYDGSCFEPIQVIINNDLA 60

Query: 58  CFEI-AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
            ++     + +   + + G ++   A           +EL A ++E++   ++       
Sbjct: 61  NYQTEILRLTAGCSVIVTGNIVESPASGQA-------VELQALEVEVVGWVDDPDTYPMA 113

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + +      +   L  R + +      R  +  ++      + F   +TP++TAS  EG
Sbjct: 114 AKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFNGQGFYWVATPLITASDTEG 173

Query: 177 ARDFLVPSRVNQG--------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPC 219
           A +    S ++                 F+   A      Q      A    + +   P 
Sbjct: 174 AGEMFRVSTLDLENLPRTEHGKIDYSQDFFGKEAFLTVSGQLNGESYACALSKVYTFGPT 233

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------- 266
           FR E+  + R   EF+ ++ E +F    D     E++L+ VF+                 
Sbjct: 234 FRAENSNTTRHLAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKHI 293

Query: 267 --------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSK 316
                    N ++  F ++ Y DAI            P+    ++ +EH        F  
Sbjct: 294 DKEVITRLENFIAAPFAQVDYSDAIEILLKSGKKFEFPVAWGVDLSSEHERFLAEEHFKS 353

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + V    +            R   D     A     PG+  I 
Sbjct: 354 PVVVKNYPKDI-----KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 71/220 (32%), Gaps = 35/220 (15%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y+F  + E          AKH++            +++  +  F   D          
Sbjct: 271 LKYVFKAVLEERKDDMQF-FAKHIDKEVI------TRLENFIAAPFAQVDYSDAIEIL-- 321

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM----PQGGMES--- 468
                 ++        F   W +D      + E ++     +  +               
Sbjct: 322 --LKSGKKF------EFPVAWGVD-----LSSEHERFLAEEHFKSPVVVKNYPKDIKAFY 368

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           ++ ND     A   D++  G  EI  G  R     V+      +G++       +     
Sbjct: 369 MRLNDDGKTVA-AMDVLAPGIGEIIGGSQREERLAVLDSRMIEMGLNP----EDYWWYRD 423

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             + G  PH G   G +R+++ + G +N+REV  FP +  
Sbjct: 424 LRKYGTVPHAGFGLGFERLIVYVTGLQNIREVIPFPRAPR 463


>gi|260582483|ref|ZP_05850274.1| asparaginyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094463|gb|EEW78360.1| asparaginyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 477

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 74/429 (17%), Positives = 137/429 (31%), Gaps = 68/429 (15%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 27  IGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYESEILRLTTGCSVI 86

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   +E          +EL A+K+E+    E+        + +      +   L 
Sbjct: 87  VTGKVVESPSEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 139

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 140 PRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 199

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 200 RGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 259

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           N V+++F
Sbjct: 260 MVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENFVNSDF 319

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH        F   + V    +       
Sbjct: 320 AQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDI----- 374

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
                R   D     A     PG+  I            +G   +   +   +     + 
Sbjct: 375 KAFYMRLNDDGKTVAAMDVLAPGIGEI------------IGGSQREERLDVLDKRMEEMG 422

Query: 393 MQDGDSCFF 401
           +   D  ++
Sbjct: 423 LNPDDYWWY 431



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+ +    +G++ +             +
Sbjct: 382 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDKRMEEMGLNPDDYW----WYRDLRK 436

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 437 YGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPR 473


>gi|50556164|ref|XP_505490.1| YALI0F16291p [Yarrowia lipolytica]
 gi|49651360|emb|CAG78299.1| YALI0F16291p [Yarrowia lipolytica]
          Length = 582

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/277 (19%), Positives = 115/277 (41%), Gaps = 13/277 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVAN--PDSA 57
           + +Y+  + G++        V ++G VH +R  G  + F  +       Q++A    +  
Sbjct: 103 VEKYKGLARGEIKK---DEEVSVAGRVHTLRAAGSKLRFYVLHQEGKTVQIMAQGQDNEG 159

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            + I   +R   V+ I G        T       G++ +  +++ +L+ +    LP    
Sbjct: 160 DWGIHDLIRRGDVIGIRGY----PGRTEPKKGGEGELSVFCKELVLLTPSL-HMLPTHQS 214

Query: 118 REYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                  RF+ R+LDL  +   +   + R++II  +R  +  ++FIE  TP++   +   
Sbjct: 215 GFKDVETRFRQRYLDLIMNDSTRERFIVRSKIIQYIRKFLDNKDFIEVETPMMNIIAGGA 274

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                V    +      +  AP+ Y + L+  G +R ++I   FR+E       P EF  
Sbjct: 275 TAKPFVTHHNDLNLDMYMRIAPELYLKQLVVGGMERVYEIGRQFRNEGIDQTHNP-EFTT 333

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
            +   ++ +  D++ T E +   + +E + G  +   
Sbjct: 334 CEFYEAYADVYDLMETTELLFSEMVKEITGGYKIEYQ 370



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 ++++     EI +     +      Q F      K+  ++           A +
Sbjct: 475 RPGICERFEVFVATKEICNAYTELNDPFDQRQRFEEQARQKDAGDDEAQLVDETFCTALE 534

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   G+DR+ M L  +  ++EV LFP  +
Sbjct: 535 YGLPPTAGWGCGVDRLTMFLTNSNTIKEVLLFPAMK 570


>gi|332221732|ref|XP_003260018.1| PREDICTED: lysyl-tRNA synthetase isoform 2 [Nomascus leucogenys]
          Length = 625

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 59/287 (20%), Positives = 115/287 (40%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 155 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFIHINNKLRRGDIIGV 212

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +   +I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 213 QGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 269

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 270 QKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 328

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ 
Sbjct: 329 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMVS 387

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          ++ Y            D   P    N+ E 
Sbjct: 388 GMVKHITGSY-------KVTYHPDGPEGQAYDIDFTPPFQRINMVEE 427



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 507 KEGLTERFELFVMKKEICNAYTELNDPMQQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 566

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 567 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMK 602


>gi|326384378|ref|ZP_08206059.1| lysyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326196976|gb|EGD54169.1| lysyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 1131

 Score =  181 bits (459), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 103/257 (40%), Gaps = 17/257 (6%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIA 62
           TH+      ++ G  VR++G + R R  G + F D+ D  G  QV+    +      + A
Sbjct: 677 THTVAQAAAAEAGETVRIAGRLTRKRDFGKVTFADLHDQSGEIQVLVESQAIVAQPLDFA 736

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++    ++ + G V             +G++ + A    +       PLP         
Sbjct: 737 STIDLGDLVEVTGTV---------GTSRSGELSVLATDWRLNGKCL-HPLPDKWSGLTDP 786

Query: 123 SIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R + R++DL      + + + R+ ++ ++R  + A+ F+E  TPIL        A  F
Sbjct: 787 EARVRQRYVDLAVSARSRELLITRSAVVRALRDHLAAQGFLEVETPILQQIHGGANATPF 846

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                      Y L  AP+ Y + L   G ++ F++   FR+E       P EF  L+  
Sbjct: 847 RTHINAYNLDLY-LRIAPELYLKRLCVGGIEKVFEMGRNFRNEGVDFSHNP-EFTSLEAY 904

Query: 241 MSFVEQDDILNTMENVL 257
            +  + + ++     ++
Sbjct: 905 AAHHDYESMMTLTREMI 921



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 55/157 (35%), Gaps = 28/157 (17%)

Query: 411  SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
              A      + + L + +   F   +  DFP             + +P T     +E   
Sbjct: 993  WDAGHLVLELYEHL-VEDRTTF-PTFYKDFP------------TSTSPLTRGHRSIE--- 1035

Query: 471  GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLY 526
                    A ++DLV  G E+ +            +  +   I                 
Sbjct: 1036 ------GVAERWDLVAWGVELGTAYTELTDPVEQRKRLTEQSILAAGGDSEAMEIDEDFL 1089

Query: 527  RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A +  MPP GG+  G+DRIVML+ G +++RE   FP
Sbjct: 1090 TALEYAMPPTGGLGLGVDRIVMLITG-QSIRESLAFP 1125


>gi|325853895|ref|ZP_08171411.1| lysine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325484232|gb|EGC87162.1| lysine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 578

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 109/274 (39%), Gaps = 10/274 (3%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F +I+D  G  QV    D  C    K + ++    +  +  
Sbjct: 52  REVVIAGRMMGRRVMGKASFAEIQDSKGRIQVYITRDDICPGEDKDLYNKVFKKLLDIGD 111

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFKYRFLD 132
               +        G+I + A++I +LS + +    V  +      +      R++ R++D
Sbjct: 112 FIGIKGFVFKTQMGEISVHAKEITLLSKSLKPLPVVKYKDGEAYDKFEDPEQRYRQRYVD 171

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +  +    +KR  ++ +MR       + E  TP L +      AR F+         
Sbjct: 172 LVVNDGVKDTFLKRATVLRTMRRFFDEAGYTEVETPTLQSIPGGASARPFITHFNALNID 231

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + ++
Sbjct: 232 MY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRFHNP-EFTCMELYVQYKDYNWMM 289

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           +  E +L  +  E +    V      I +    R
Sbjct: 290 SFTEQLLEKICTEVNGKPEVQMGDKTISFKAPFR 323



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 9/145 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+A+     +      + F
Sbjct: 379 EGTFIQPTFIIDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERF 438

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +     +  ++          RA Q GMPP  GI  GIDR+VML+ G + ++EV LFP 
Sbjct: 439 LDQMHLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGKEYIQEVLLFPQ 498

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGL 589
            +         P + SV++  ELG+
Sbjct: 499 MK----PEPKIPQS-SVKEWAELGV 518


>gi|224418996|ref|ZP_03657002.1| lysyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827942|ref|ZP_04870827.1| Lysyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313142508|ref|ZP_07804701.1| lysyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511348|gb|EES90007.1| Lysyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313131539|gb|EFR49156.1| lysyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 497

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 64/290 (22%), Positives = 122/290 (42%), Gaps = 19/290 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             D     +++G +  +R  G   F+ I D+ GI Q+  + +    E+ +          
Sbjct: 54  KKDRSKNAQVAGRIKFIRLMGKAAFIKIEDNSGILQIYLSKN----ELGEGFDLFKKYIE 109

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++   A+       TG++ L A + +IL+ A   PLP          +R++ R+LDL
Sbjct: 110 VGDIIM--AKGFPFVTKTGELSLHALEFQILTKAIS-PLPEKYHGLVDIEMRYRQRYLDL 166

Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +  +    V R++II+ +R       F+E  TP++        A+ F+          
Sbjct: 167 IMNREVRDTFVLRSKIISYVRKFFEENGFLEVETPMMHPIPGGANAKPFVTFHNALNVER 226

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++ +  D++ 
Sbjct: 227 Y-LRIAPELYLKRLVVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYKDYKDLIR 284

Query: 252 TMENVLRGVFE--------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
             + +   +F+        +F+      + F  I Y D++   G    D+
Sbjct: 285 LTKALFDYLFKVLKLPKTLQFNEKEIDFSEFREITYVDSLVEIGGIPRDV 334



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 56/168 (33%), Gaps = 27/168 (16%)

Query: 400 FFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF 459
                  L+        ++        +        +I DFP             A +P 
Sbjct: 345 LVSHNVKLESKMELGKLQSEAFDAF--VEDKLINPTFITDFP------------IAISPL 390

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
                       ND     A +++L   G EIA+G    +      + F     +KE  +
Sbjct: 391 ARR---------NDHNPEIADRFELFIGGSEIANGFSELNDPLDQYERFKAQVAAKEAGD 441

Query: 520 NRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                       A   GMPP  G   GIDR+VMLL G   +++V LFP
Sbjct: 442 EEAQYMDEDYITALSYGMPPTAGEGIGIDRLVMLLTGHNIIKDVILFP 489


>gi|191638480|ref|YP_001987646.1| asparaginyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|301066535|ref|YP_003788558.1| aspartyl/asparaginyl-tRNa synthetase [Lactobacillus casei str.
           Zhang]
 gi|190712782|emb|CAQ66788.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS)
           [Lactobacillus casei BL23]
 gi|300438942|gb|ADK18708.1| Aspartyl/asparaginyl-tRNA synthetase [Lactobacillus casei str.
           Zhang]
 gi|327382514|gb|AEA53990.1| Asparaginyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327385711|gb|AEA57185.1| Asparaginyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 432

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 67/310 (21%), Positives = 116/310 (37%), Gaps = 32/310 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
              V   V++  W+   R  G I FL +RD           A+     F +AK +R E  
Sbjct: 11  KEHVNEEVKIGAWLTDKRSSGKIAFLQLRDGSAYFQGVVSKADVPEEVFSLAKELRQESS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I G++   S             E+  + IE++  + + P      +E+       +R 
Sbjct: 71  MWITGVIHQDSRSHF-------GYEIEVRNIELVGDSHDYP---ISPKEHGIEFLLDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR          R  +I +       E FI+   PILT S+PEG  +       ++ +
Sbjct: 121 LWLRSKRQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEGTTELFETDYFDKKA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y     A  + + F   P FR E  ++ R   EF+ ++ EM+F  Q++ L
Sbjct: 181 Y--LSQSGQLY-AEAGAMAYGKVFTCGPVFRAEKSKTRRHLTEFWMIEPEMAFCHQEESL 237

Query: 251 NTMENVLRGVFEEFSNGNTVSNN----------------FLRICYDDAIRRYGTDKPDLR 294
              E  +  + +   +      +                + RI Y  AI+       D++
Sbjct: 238 KVQERYVAYLVQSVLDNCAYPLHLLDRDPEVLKQYTKLPYPRITYKQAIKMLQDAGMDVK 297

Query: 295 NPIIMHNVTE 304
                 +  E
Sbjct: 298 YGDDFGSPEE 307



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 19/135 (14%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTM--PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           D P +  N           PF M       +     D+L+ + +         EI  G  
Sbjct: 315 DQPVFVLN-----YPKTIKPFYMLTDPEDDQQYVCADMLAPEGYG--------EIIGGSE 361

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R    + +  A  + G+  +  E          + G  PH G   G++R +  +    ++
Sbjct: 362 RETDYDTLKNAIEHAGLDLDEYE----WYLDLRKYGSVPHSGFGLGLERAITWVCKLDHL 417

Query: 557 REVSLFPMSQNFCDL 571
           RE   FP   N    
Sbjct: 418 REAIPFPRMINRLKP 432


>gi|197263554|ref|ZP_03163628.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197241809|gb|EDY24429.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
          Length = 466

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 124/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V   V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDQEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEEV----LHLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A K+E+    E+        + +      +   L  R 
Sbjct: 72  CSVVVTGKVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++  +     
Sbjct: 132 NLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 196 QA-----------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           Q                    Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGRVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + +D     E +L+ VF                             VS +F  +
Sbjct: 252 PEVAFADLEDNARLAEAMLKYVFNAVLEERADDMKFFAERVDKDAIARLERFVSTDFAHV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVAILERCGKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|330830401|ref|YP_004393353.1| asparaginyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328805537|gb|AEB50736.1| Asparaginyl-tRNA synthetase, putative [Aeromonas veronii B565]
          Length = 466

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 68/388 (17%), Positives = 121/388 (31%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVLC 72
           VG+   + GW+   R    GI FL I D      V A   +           + +   + 
Sbjct: 16  VGTTQTVKGWIRTRRDSKAGISFLAISDGSCFHPVQAVVPNTLANYENEVLRLTTACSVE 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G+V +               EL A +++++   E+        + +      +   L 
Sbjct: 76  VTGVVAASQGSGQA-------FELQATEVKVVGWVEDPDTYPMAAKRHSIEYLREQAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ---- 188
            R + +      R  +  ++      E F+  +TP++TAS  EGA +    S ++     
Sbjct: 129 PRTNIVGAVTRVRHCLAQAIHRFFHEEGFLWVATPLITASDTEGAGEMFRVSTLDMENLP 188

Query: 189 ----------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+   A      Q      A    + +   P FR E+  + R   EF+
Sbjct: 189 RTDAGKVDYNEDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTSRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-------------------- 275
            ++ E++F + +D     E +L+ VF            F                     
Sbjct: 249 MVEPEVAFNDLEDNAALAEAMLKYVFNAVLTERRDDLEFFAQHVDKDAIGRLERFVSSDF 308

Query: 276 -RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH  +     F   + V    +       
Sbjct: 309 AQIDYTDAIEVLQNCGKKFEFPVSWGIDLSSEHERYLAEEHFKSPVVVKNYPKDI----- 363

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 364 KAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+    + +G++K      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNK----EDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+V+ + G  NVR+V  FP +  
Sbjct: 426 FGTVPHSGFGLGFERLVVYVTGMGNVRDVIPFPRTPR 462


>gi|323451918|gb|EGB07794.1| hypothetical protein AURANDRAFT_59065 [Aureococcus anophagefferens]
          Length = 485

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 59/297 (19%), Positives = 112/297 (37%), Gaps = 21/297 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIA----KSVRS 67
           G  D G+ V + G +   R  G  + F  +RD  G  Q+          +     K+ ++
Sbjct: 32  GAEDEGARVSVCGRLMAKRVFGKKLAFFGLRDATGEIQLFLEKKRVNGGLGDGDPKTFKN 91

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
                  G V+  S      +   G++ +      +L+ A   PLP   +       R++
Sbjct: 92  LLEWTDGGDVVGASGTVKRTD--KGELSVYVDDWTMLTKALA-PLPDKHKGLVDVQTRYR 148

Query: 128 YRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSR 185
            R LDL     + +    R +I + +R  +    F+E  TP L        A+ F     
Sbjct: 149 RRELDLIANPDVRRTFELRAKITSGIRRFLDDRGFLEIETPTLHSQPGGAEAKPFETKHN 208

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                   L  A + + + L+  GFDR +++   FR+E   +   P EF  +++  ++ +
Sbjct: 209 ALDLDL-TLRIATELHLKRLVVGGFDRVYELGRIFRNEGVSTRHNP-EFTSVELYQAYAD 266

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKPDL 293
            DD++   E ++  + E       +            + R+   + +R  G D   L
Sbjct: 267 YDDMMVLTETLVESLAENLVGTTQLPYADETIDVSAPWRRVTMSEVVRDAGVDFEGL 323



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 4/88 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPP 535
            +++L C G E+A+              F      K   ++           A + G+PP
Sbjct: 392 ERFELFCVGRELANAYSELTDPVDQRARFEAQAAKKAAGDDEACGVDEDFLAAVEHGLPP 451

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG+  GIDR+VMLL  A ++R+V  FP
Sbjct: 452 TGGLGIGIDRLVMLLTNAPSIRDVIAFP 479


>gi|314972315|gb|EFT16412.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
          Length = 1081

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 10/253 (3%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+     G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+      +  R
Sbjct: 626 HQPGDVVTELTGQEMTVSGRVDACRDHGGVIFIDLFDWTGACQLVMERDAVGVNNLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686 HTVSL---GDHLVATGTVGASR--NGTLSLKVTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ +FIE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPGARDQLRARSNAIRAVRETLLSHDFIEVETPILQTIHGGANARPFRTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+   ++ 
Sbjct: 800 NAYDLELY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 245 EQDDILNTMENVL 257
           +   + +  + ++
Sbjct: 858 DYVQMRHLTQEMI 870



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 472  NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYR 527
            +D     A ++DL+  G E+ +         +  + F+   +                  
Sbjct: 982  DDPR--LAEKWDLIIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLE 1039

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A +  MPP GG+  G+DR+VMLL  A ++RE   FP
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMLLTNA-SIRETISFP 1074


>gi|313836706|gb|EFS74420.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314929886|gb|EFS93717.1| lysyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|328907744|gb|EGG27508.1| lysine--tRNA ligase [Propionibacterium sp. P08]
          Length = 1081

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 10/253 (3%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+     G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+      +  R
Sbjct: 626 HQPGDVVTELTGQEMTVSGRVDACRDHGGVIFIDLFDWTGACQLVMERDAVGVNNLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686 HTVSL---GDHLVATGTVGASR--NGTLSLKVTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ +FIE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPGARDQLRARSNAIRAVRETLLSHDFIEVETPILQTIHGGANARPFRTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+   ++ 
Sbjct: 800 NAYDLELY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 245 EQDDILNTMENVL 257
           +   + +  + ++
Sbjct: 858 DYVQMRHLTQEMI 870



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 472  NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYR 527
            +D     A ++DL+  G E+ +         +  + F+   +                  
Sbjct: 982  DDPR--LAEKWDLIIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLE 1039

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A +  MPP GG+  G+DR+VMLL  A ++RE   FP
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMLLTNA-SIRETISFP 1074


>gi|313680007|ref|YP_004057746.1| asparaginyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152722|gb|ADR36573.1| asparaginyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 439

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 74/365 (20%), Positives = 124/365 (33%), Gaps = 30/365 (8%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKS 64
              ++   + G  VRL+GW+   R  G + FL +RD  G  Q      N D A F  A  
Sbjct: 5   YIEEIARYE-GQEVRLAGWLVNRRSKGKLHFLIVRDGTGFIQATVFKGNVDEATFVRADH 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R E  L + G V + +          G  E+    +E+LS  E         +E+    
Sbjct: 64  LRQETALEVWGRVKADAR-------APGGYEIEVLGLEVLS--EPEGEYPITPKEHGIEF 114

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              +R L LR       +  R  I  +         F+   TPILT ++ EG  +     
Sbjct: 115 LMDHRHLWLRHRRPWAVMRIRDEIERATYDFFAQRGFVRFDTPILTPNAVEGTTELFEVD 174

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
            +  G    L Q+ Q Y     A  + + +   P FR E  ++ R   EF+ ++ E +F+
Sbjct: 175 -LFDGQKAYLSQSGQLY-AEAGALAYGKVYTFGPTFRAERSKTRRHLLEFWMVEPEAAFL 232

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           + +  +   E  +  +                      +   G D   L  P    +   
Sbjct: 233 DHEGNVALQEAYVSYLVGRVLEHRARE-----------LELLGRDPAALE-PAAAGDYPR 280

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE---WARSQGQPGLAYIFW 361
                   +  KI + +P  +        G  + A   R  +   +         A+   
Sbjct: 281 LTYKEAIDLLEKIAASDPEVDALPYGEDFGAPHEAAISRRFDRPVFIEKYPAAIKAFYMQ 340

Query: 362 RLDES 366
             DE 
Sbjct: 341 PDDED 345



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 39/115 (33%), Gaps = 10/115 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A   F M     +     +   +    Y       EI  G  R H   ++L+    
Sbjct: 329 KYPAAIKAFYMQPDDEDPSLVKNDDLLAPEGY------GEIIGGSERIHEPGLLLKRIRE 382

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G+     E  F       + G  PH G   G++R V  + G  +VRE   FP  
Sbjct: 383 HGLP----EEVFDWYLDLRRYGSVPHAGFGLGLERTVAWIAGLAHVREAIPFPRM 433


>gi|242045666|ref|XP_002460704.1| hypothetical protein SORBIDRAFT_02g033440 [Sorghum bicolor]
 gi|241924081|gb|EER97225.1| hypothetical protein SORBIDRAFT_02g033440 [Sorghum bicolor]
          Length = 552

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 55/292 (18%), Positives = 105/292 (35%), Gaps = 36/292 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSE 68
           D G + VG  + + GWV   R    + F+++ D   ++ +     PD+  ++   SV + 
Sbjct: 89  DEGAAWVGKELTVRGWVRTCRAQRTVTFVEVNDGSCLSNMQCVLTPDTEGYDQIDSVTTG 148

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + ++G+V S             ++EL   KI ++  ++    P+  +R          
Sbjct: 149 ASVLVEGVVASSQGG-------KQKVELKVSKITVIGKSDPTSFPIQKKR-ASREFLRTV 200

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +T       R  +  +         F+  S+PI+TAS  EGA +    + +  
Sbjct: 201 AHLRPRTNTFGAVARVRNALAYATHKFFQDNGFVWVSSPIITASDCEGAGEQFYVTTLLS 260

Query: 189 G-----------------------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRD 222
                                    F+  P       Q      AS     +   P FR 
Sbjct: 261 NSAEGGSLLKDIPATKDGRVDWSQDFFCKPAFLTVSGQLNGETYASALSDIYTFGPTFRA 320

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           E+  + R   EF+ ++ E++F + +D +      L+ V +          +F
Sbjct: 321 ENSNTARHLAEFWMIEPELAFADLNDDMACATAYLQYVVKYILENCKEDMDF 372



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 4/87 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    E+  G  R    + +        ++K      +       + G  PH G   G 
Sbjct: 469 LVPRVGELIGGSQREERLDYLEARLDEQNLNK----ESYWWYLDLRRYGSVPHAGFGLGF 524

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +R+V    G  N+R+   FP      +
Sbjct: 525 ERLVQFATGIDNIRDAIPFPRVPGSAE 551


>gi|182415533|ref|YP_001820599.1| asparaginyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177842747|gb|ACB76999.1| asparaginyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 462

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 55/349 (15%), Positives = 114/349 (32%), Gaps = 47/349 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L        + + GWV   R      FL++ D   +  +     +          ++   
Sbjct: 11  LHSESAQDTILVHGWVRTRRDAKTFSFLELNDGSCLKNLQVIAPATLAN-----YTDVQH 65

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  ++   + + +     + E++A+ + ++  A+    P+  +   PE +R +   L
Sbjct: 66  LTTGASVTVRGKLVPSQGQGQKWEVTAEDVTVIGTADATY-PLQKKGHTPEFLR-EIAHL 123

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--- 188
             R +        R+R+  ++        F+   TPI+T S  EGA +    +  +    
Sbjct: 124 RPRSNLFGAVFRTRSRLAFAIHRFFQERGFVYVHTPIITGSDCEGAGELFRVTTHDLANP 183

Query: 189 -----------GSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+A         Q +    A    + +   P FR E+  + R   EF
Sbjct: 184 PKREDGLIDDAKDFFARRTYLTVSGQLEAEAFACALGKVYTFGPTFRAENSNTSRHANEF 243

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------------------SNN 273
           + ++ E++F +    ++  E  ++ +  E                               
Sbjct: 244 WMIEPEVAFCDLQGNMDLAEEFVKALIREVRTNCAEDLELFAKFVDKELLARLDFVLERP 303

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHN--VTEHFVHSEFRVFSKILSV 320
           F R+ Y +AI            P+       +EH  +    VF    +V
Sbjct: 304 FQRVSYTEAIELLKKSGKQFEYPVEYGTNLQSEHERYLTEVVFKCPTTV 352



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 14/110 (12%)

Query: 458 PFTMP-QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           PF M      +++   D+         LV    EI  G  R    +V+       G+  +
Sbjct: 361 PFYMRLNDDDKTVTAMDV---------LVPGIGEIVGGSQREERLDVLEANMRRHGVDPK 411

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                +G      + G  PH G   G +R++M + G  N+R+V  F  + 
Sbjct: 412 D----YGWYLDLRRYGTVPHAGFGLGFERMLMFVTGVPNIRDVIPFARTP 457


>gi|314966150|gb|EFT10249.1| lysyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
          Length = 1081

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 10/253 (3%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   DS   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDSMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686 HTVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+   ++ 
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 245 EQDDILNTMENVL 257
           +   + +    ++
Sbjct: 858 DYVQMRHLTREMI 870



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 472  NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYR 527
            +D     A ++DL+  G E+ +         +  + F+   +                  
Sbjct: 982  DDPR--LAEKWDLIIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLE 1039

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074


>gi|37525688|ref|NP_929032.1| asparaginyl-tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|59798577|sp|Q7N622|SYN_PHOLL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|36785117|emb|CAE14046.1| asparaginyl-tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 466

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 72/410 (17%), Positives = 133/410 (32%), Gaps = 53/410 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL + D      + A  ++        V    +    G
Sbjct: 16  VDSEVTVRGWIRTRRDSKAGISFLAVYDGSCFNPLQAVVNNNLPNYQDEV----LHLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  +   + +       EL A KI ++ + E+        + +      +   L  R 
Sbjct: 72  CSVEVTGTVVASLGQGQNFELQATKIVVIGLVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++        +   STP++TA+  EGA +    S ++        
Sbjct: 132 NLIGAVARMRHTLAQALHRFFHENGYFWVSTPLITAADTEGAGEMFRVSTLDLQNLPLTD 191

Query: 189 -------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 KGEVDFNQDFFGREAFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +D     EN+L+ VF+                            ++++F +I
Sbjct: 252 PEIAFANLNDAATLAENMLKYVFKAALAERADDLQFFAERVDKDVITRLEKFINSDFAQI 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y  AI           NP+    ++ +EH  +   + F   + V    +          
Sbjct: 312 DYTSAIEILQNCGQKFENPVFWGVDLSSEHERYLAEKHFQAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE 385
             R   D     A     PG+  I   +  S     +  + K L  +   
Sbjct: 367 YMRMNDDGKTVAALDVLAPGIGEI---IGGSQREERLDMLDKRLEEMGLN 413



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 5/122 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    +++ + 
Sbjct: 347 EKHFQAPVVVKNYPKDIKAFYMRMNDDGKTVAALDVLAPGIGEIIGGSQREERLDMLDKR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              +G++K      +       + G  PH G   G +R+V  + G  NVR+V  FP +  
Sbjct: 407 LEEMGLNK----EDYWWYRDLRRYGTVPHSGFGLGFERLVAYVTGVPNVRDVIPFPRTPR 462

Query: 568 FC 569
             
Sbjct: 463 SA 464


>gi|253567191|ref|ZP_04844641.1| asparaginyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251944022|gb|EES84541.1| asparaginyl-tRNA synthetase [Bacteroides sp. 3_2_5]
          Length = 467

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 59/295 (20%), Positives = 108/295 (36%), Gaps = 29/295 (9%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     +   D G+ V + GWV   R    + F+ + D   I  V    D A F
Sbjct: 1   MEKISRTKIVDLMKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQVVVDLANF 60

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+ K + +   L ++G++         A       E+ A++IE+L   +        +
Sbjct: 61  DEEMLKQITTGACLSVNGVLTESVGTGQKA-------EVQAREIEVLGTCDNTYPLQ--K 111

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           + +      +   L  R +T       R  +  ++      + F    TPI+TAS  EGA
Sbjct: 112 KGHSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGA 171

Query: 178 RDFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
                 + +N                 F+    +     Q +  L A+     +   P F
Sbjct: 172 GQMFQVTTMNLYDLKKDENGSIVYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F E  + ++  E  ++       +       FL
Sbjct: 232 RAENSNTPRHLAEFWMIEPEVAFNEIQENMDLAEEFIKYCVRWALDNCADDVKFL 286



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 4/87 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L     EI  G  R      ++     + I  + +           + G  PH G   G 
Sbjct: 384 LFPKIGEIIGGSERESDYNKLMTRIEEMHIPMKDMW----WYLDTRKFGTCPHSGFGLGF 439

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +R+++ + G  N+R+V  FP +    D
Sbjct: 440 ERLLLFVTGMSNIRDVIPFPRTPRNAD 466


>gi|297716158|ref|XP_002834410.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like [Pongo
           abelii]
          Length = 515

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 70/344 (20%), Positives = 126/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V   +         + +E  + + G+
Sbjct: 92  GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGM 151

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 152 LNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 207

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ +    R       + E + P L  +  EG           + +F  L Q
Sbjct: 208 NMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 265

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  DD+LN +E++
Sbjct: 266 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLEDL 324

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 325 VCDVVDRVLKSPAGSVVHELNPNFQPPKRPFKRMNYSDAIVWLKEHDVKKEDG-TFYEFG 383

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 384 EDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDSRLTE 427



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +S     +         L+ N  EI  G +R   SE +L  +  
Sbjct: 406 RFPVEIKSFYMQRCPEDSRLTESVDV-------LMPNVGEIVGGSMRICDSEEILAGYKR 458

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 459 EGIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCT 514

Query: 571 L 571
            
Sbjct: 515 P 515


>gi|229552288|ref|ZP_04441013.1| asparagine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539697|ref|YP_003174196.1| asparaginyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|229314360|gb|EEN80333.1| asparagine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257151373|emb|CAR90345.1| Asparaginyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 432

 Score =  181 bits (459), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 67/310 (21%), Positives = 116/310 (37%), Gaps = 32/310 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
              V   V +  W+   R  G I FL +RD           A+     F++AK +R E  
Sbjct: 11  KEHVNEEVTIGAWLTDKRSSGKIAFLQLRDGSAYFQGVVSKADVPDEVFQLAKELRQESS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I G++   S             E+  + IE++  + + P+     +E+       +R 
Sbjct: 71  MWITGVIHQDSRSHF-------GYEIEVRNIELVGDSHDYPITP---KEHGIEFLLDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR          R  +I +       E FI+   PILT S+PEG  +       ++ +
Sbjct: 121 LWLRSKRQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEGTTELFETDYFDKKA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y     A  + + F   P FR E  ++ R   EF+ ++ EM+F  Q++ L
Sbjct: 181 Y--LSQSGQLY-AEAGAMAYGKVFTCGPVFRAEKSKTRRHLTEFWMIEPEMAFCHQEESL 237

Query: 251 NTMENVLRGVFEEFSNGNTVSNN----------------FLRICYDDAIRRYGTDKPDLR 294
              E  +  + +   +      +                + RI Y  AI        D++
Sbjct: 238 KVQERYVAYMVQAVLDNCAYPLHLLGRDPEVLKQYTKLPYPRISYKKAIEMLQAAGMDVK 297

Query: 295 NPIIMHNVTE 304
                 +  E
Sbjct: 298 YGDDFGSPEE 307



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 15/133 (11%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D P +  N        A  PF M     +  +      +    Y       EI  G  R 
Sbjct: 315 DQPVFVLN-----YPKAIKPFYMLTDPEDEQQYVCADMLAPEGY------GEIIGGSERE 363

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + +  A    G+  +  E          + G  PH G   G++R +  +    ++RE
Sbjct: 364 TDYDKLKAAIEKAGLDLDEYE----WYLDLRKYGSVPHSGFGLGLERAITWICKLDHLRE 419

Query: 559 VSLFPMSQNFCDL 571
              FP   N    
Sbjct: 420 AIPFPRMINRLKP 432


>gi|328712350|ref|XP_003244784.1| PREDICTED: lysyl-tRNA synthetase-like isoform 3 [Acyrthosiphon
           pisum]
          Length = 610

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 110/258 (42%), Gaps = 8/258 (3%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
                ++G VH +R  G  +IF D+R      QV+AN      E  +S  S+      G 
Sbjct: 138 DEKYSVAGRVHAIRESGPKLIFYDLRGEGVKIQVMANAKQYTTE--ESFLSDTSKIRRGD 195

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-R 135
           ++  +          G++ +  Q I++L+      LP        +  R++ R+LDL   
Sbjct: 196 IIGVTGSP--GKTKKGELSIFPQNIKLLTPCL-HMLPHMHYGLKDKETRYRQRYLDLIIN 252

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +    + R ++I+ +R  +    F+E  TP++   +        +    +      + 
Sbjct: 253 EHVRNKFIVRAKVISYVRRFLDNLGFLEIETPMMNMIAGGATAKPFITHHNDLNMDLFMR 312

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++   E+
Sbjct: 313 VAPELYHKMLVVGGIDRVYEIGRQFRNEAIDLTHNP-EFTTCEFYMAYADYNDLMQITED 371

Query: 256 VLRGVFEEFSNGNTVSNN 273
           +L G+ +       +  +
Sbjct: 372 LLSGLVKSIYGTYKIKYH 389


>gi|315104379|gb|EFT76355.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
          Length = 1081

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 10/253 (3%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   DS   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDSMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686 HTVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+   ++ 
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 245 EQDDILNTMENVL 257
           +   + +    ++
Sbjct: 858 DYVQMRHLTREMI 870



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 472  NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYR 527
            +D     A ++DL+  G E+ +         +  + F+   +                  
Sbjct: 982  DDPR--LAEKWDLIIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLE 1039

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074


>gi|315095041|gb|EFT67017.1| lysyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|327328181|gb|EGE69950.1| lysine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 1081

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 10/253 (3%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   DS   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDSMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686 HTVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+   ++ 
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 245 EQDDILNTMENVL 257
           +   + +    ++
Sbjct: 858 DYVQMRHLTREMI 870



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 472  NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYR 527
            +D     A ++DL+  G E+ +         +  + F+   +                  
Sbjct: 982  DDPR--LAEKWDLIIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLE 1039

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074


>gi|257466811|ref|ZP_05631122.1| asparaginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 463

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 68/372 (18%), Positives = 129/372 (34%), Gaps = 61/372 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
           +   V+L  WV ++R      FL+I D       QVV +     F+    +     + ++
Sbjct: 17  IDKEVKLGAWVRKIRSQKNFGFLEINDGSFFYGIQVVFDTSLENFDEISRLSIASSVIVE 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++              + E+ A K+E+   A+ L  P+  +R   E +R K   L  R
Sbjct: 77  GTLVKSEGAG-------QEFEIKASKVEVCQKAD-LDYPLQNKRHSFEFLRTKS-HLRAR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +T       R+    ++      +NF+   TPI+T+S  EGA +    + ++       
Sbjct: 128 TNTFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITSSDAEGAGEMFRITTLDLNNVPKN 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q       + F   +   P FR E   + R   EF+ +
Sbjct: 188 EDGSINFQKDFFGKSTNLTVSGQLNGETYCAAFRNIYTFGPTFRAEYSNTARHASEFWMI 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + EM+F + +  ++  E +++ +            NF                      R
Sbjct: 248 EPEMAFADLEVNMDIAEKMVKYIIRYVMETCPEEMNFFNQFIEKGLFDKLNNVLNNDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           + Y +AI            P+   +   +EH  +     F K + +    +         
Sbjct: 308 LTYTEAIDILEKSGKKFEYPVKWGIDLQSEHERYLAEEHFKKPVFLVDYPKDI------- 360

Query: 335 GGNRAFCDRMNE 346
              +AF  ++NE
Sbjct: 361 ---KAFYMKLNE 369



 Score = 80.5 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 57/147 (38%), Gaps = 26/147 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  +++D+P        K I      F M           D  +++A  
Sbjct: 338 HERYLAEEHFKKPVFLVDYP--------KDIKA----FYMK-------LNEDGKTVRAM- 377

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+     EI  G  R    E++    + +G+ K      +       + G  PH G  
Sbjct: 378 -DLLAPQIGEIIGGSQREDNLEILETRMNELGMDK----EDYSFYLDLRKYGSFPHSGYG 432

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G +R++M L G  N+R+V  FP + N
Sbjct: 433 LGFERMIMYLTGMANIRDVIPFPRTPN 459


>gi|330752109|emb|CBL87070.1| Lysyl-tRNA synthetase [uncultured Flavobacteria bacterium]
          Length = 563

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 15/254 (5%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS--EWVLCIDGL 76
             V ++G +   R  G   F +++D  G  QV  N D  C    K++ +     L   G 
Sbjct: 48  KEVIIAGRLMSRRIQGKASFAEVQDSQGRIQVYFNRDEICAGEDKTLYNEVYKKLLDIGD 107

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKYR 129
           ++          +  G+  +  +K ++L+ +         + E           +R++ R
Sbjct: 108 IIGIEGTLFTTQV--GEQTILVKKFDLLNKSLRPLPLPKTDSEGNTFDEFNDPELRYRQR 165

Query: 130 FLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL  +  + +  +KRT+I NS+R    A++++E  TPIL        AR F+      
Sbjct: 166 YVDLIVNPKVKETFIKRTKITNSIREYFNAKDYLEVETPILQPIPGGASARPFMTHHNAL 225

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ +  
Sbjct: 226 DIPLY-LRVANELYLKRLIVGGFDGVYEFSKDFRNEGMDRTHNP-EFTVMELYVAYKDYF 283

Query: 248 DILNTMENVLRGVF 261
            ++ T E +L  V 
Sbjct: 284 WMMETTEALLEKVA 297



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+ NG E+A+     +      + F
Sbjct: 374 EHHYIQPTFITDYPKEMSPLTKEHRSNPKLTERFELIVNGKELANAYSELNDPIDQKERF 433

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  E  ++          RA + GMPP  GI  GIDR+VML+    +++EV  FP 
Sbjct: 434 GEQLKLSEKGDDEAMFIDQDFLRALEYGMPPTSGIGIGIDRLVMLMTNNSSIQEVLFFPQ 493

Query: 565 SQ 566
            +
Sbjct: 494 MR 495


>gi|260947816|ref|XP_002618205.1| asparaginyl-tRNA synthetase [Clavispora lusitaniae ATCC 42720]
 gi|238848077|gb|EEQ37541.1| asparaginyl-tRNA synthetase [Clavispora lusitaniae ATCC 42720]
          Length = 552

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 73/391 (18%), Positives = 134/391 (34%), Gaps = 52/391 (13%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            ++ S V + GWVHR+R   G+ F+ +RD  G  Q V + D A   I + +  E  + I 
Sbjct: 124 ENINSRVTVQGWVHRLRLQKGVAFITLRDGTGFLQTVLSGDLAKARITQELTLESTVLIK 183

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--REYPESIRFKYRFLD 132
           G++              G +EL A   E++ +A         +       ++    R L 
Sbjct: 184 GVIEKLPEG----KTAPGGVELKADYYEVIGLAPSGDEAFTNKVQENADPALLLDQRHLT 239

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +TL      R  ++ SMR     E   E + P +  +  EG           + ++ 
Sbjct: 240 MRGETLSSVFKVRAALLTSMRRFFQEEGLTEVTPPCMVQTQVEGGSTLFKLDYYGEEAY- 298

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  +       + +   FR E   + R   E+  ++ E++F+  DD+LN 
Sbjct: 299 -LTQSSQLYLETCLP-ALGDVYCVQESFRAEKSHTRRHLSEYTHIESELAFLSFDDLLNH 356

Query: 253 MENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPD------ 292
           +E +   V +                 +       F R+ Y +A+               
Sbjct: 357 LEKLFTTVMKYVLEDPVAGPLIKKLNPDFQVPQMPFKRMTYVEALDWLNEHGIPNEEGSA 416

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF------------ 340
            +    +    E    ++      +L+  P         K     R              
Sbjct: 417 FKFGDDIAEAAER-KMTDTLNVPILLTRFPVEIKSFYMKKCADDPRVTESVDVLMPNVGE 475

Query: 341 -------CDRMNEWARSQGQPGL---AYIFW 361
                   D  +E   +  + GL   AY ++
Sbjct: 476 VTGGSMRIDDYDELVAAIKREGLDLDAYYWF 506



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 42/121 (34%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  E+  G +R    + ++ A   
Sbjct: 443 RFPVEIKSFYMKKCADDPRVTESVDV-------LMPNVGEVTGGSMRIDDYDELVAAIKR 495

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+      + +       + G  PHGG   G +RI+  L     VRE SL+P     C 
Sbjct: 496 EGLDL----DAYYWFVDQRKYGTCPHGGYGLGTERILAWLCNRYTVRECSLYPRFSGRCR 551

Query: 571 L 571
            
Sbjct: 552 P 552


>gi|15890512|ref|NP_356184.1| lysyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|39932225|sp|Q8U7H6|SYK_AGRT5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|15158751|gb|AAK88969.1| lysyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 499

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 62/292 (21%), Positives = 122/292 (41%), Gaps = 20/292 (6%)

Query: 2   HRYRTHSCGDLGVS--------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT S  +L           + G  V ++G V+  R  G  +F+DI D  G  Q+ ++
Sbjct: 37  HFHRTLSNAELAEKYADIEADVETGDTVTVAGRVYSSRNSG--MFMDIHDASGKVQIFSH 94

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D+        +    +    G ++  + +        G++ ++A++I +L+ +  LP+P
Sbjct: 95  KDTTPEAARNLLPMIDI----GDIIGVTGKVRRTK--RGELTINAEEITMLTKSL-LPMP 147

Query: 114 VFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                     +R++ R LD L  +      ++R++I++ +R  M AE F+E  TP+L   
Sbjct: 148 EKWHGVSDIELRYRKRHLDILANEDSKLRFLQRSKILSGIRRFMEAEGFLEVETPMLQTV 207

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLP 231
                 D              L  AP+ + +  + SG  D+ F+I   FR+E   +   P
Sbjct: 208 YGGATADPFKTFHNTLKMDMYLRIAPELFLKRTLVSGLSDKVFEINRNFRNEGVSTRHNP 267

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
            EF  ++   ++ + +DI+  +E +   +         V      I +    
Sbjct: 268 -EFTMMECYWAYADYEDIMGLVERLFETLAIALHGTTEVEFQGQTISFKGPF 318



 Score = 94.7 bits (234), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 7/133 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMS 501
           +E   E   I  +H   T     +           +   +++  CN +E+ +     +  
Sbjct: 369 FEEKVEATLIQPSH--VTHFPKDISPFAKEVPGEPRLVERFESYCNAWEVGNAFSELNDP 426

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   +              +          A   GMPP GG+  G+DR++MLL  A ++R
Sbjct: 427 EEQRRRMVEQLEQAHARGEKDKQLDDEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIR 486

Query: 558 EVSLFPMSQNFCD 570
           +V LFP  +N  D
Sbjct: 487 DVILFPARRNKAD 499


>gi|327313938|ref|YP_004329375.1| lysine--tRNA ligase [Prevotella denticola F0289]
 gi|326946154|gb|AEA22039.1| lysine--tRNA ligase [Prevotella denticola F0289]
          Length = 578

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 109/274 (39%), Gaps = 10/274 (3%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F +I+D  G  QV    D  C    K + ++    +  +  
Sbjct: 52  REVVIAGRMMGRRVMGKASFAEIQDSKGRIQVYITRDDICPGEDKDLYNKVFKKLLDIGD 111

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFKYRFLD 132
               +        G+I + A++I +LS + +    V  +      +      R++ R++D
Sbjct: 112 FIGIKGFVFKTQMGEISVHAKEITLLSKSLKPLPVVKYKDGEAYDKFEDPEQRYRQRYVD 171

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +  +    +KR  ++ +MR       + E  TP L +      AR F+         
Sbjct: 172 LVVNDGVKDTFLKRATVLRTMRRFFDEAGYTEVETPTLQSIPGGASARPFITHFNALNID 231

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + ++
Sbjct: 232 MY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRFHNP-EFTCMELYVQYKDYNWMM 289

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           +  E +L  +  E +    V      I +    R
Sbjct: 290 SFTEQLLEKICTEVNGKPEVQMGDKTISFKAPFR 323



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 9/145 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+A+     +      + F
Sbjct: 379 EGTFIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERF 438

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +     +  ++          RA Q GMPP  GI  GIDR+VML+ G + ++EV LFP 
Sbjct: 439 LDQMHLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGKEYIQEVLLFPQ 498

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGL 589
            +         P + SV++  ELG+
Sbjct: 499 MK----PEPKIPQS-SVKEWAELGV 518


>gi|325913193|ref|ZP_08175563.1| lysine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325477614|gb|EGC80756.1| lysine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 503

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 65/332 (19%), Positives = 122/332 (36%), Gaps = 25/332 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R++G +   R  G + F DI D  G  Q+    D    E  +  +   +    G+     
Sbjct: 61  RVAGRMLAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYQIFKQADLGDFLGI----- 115

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E       TG++ + A  I  LS A   PLP            ++ R+LDL  +     
Sbjct: 116 -EGHVMKTDTGELTIRASHITFLSKALR-PLPDKYHGLQNVEQIYRQRYLDLISNQDSYK 173

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
               RT+II ++R  + + +F+E  TP+L        AR F+        + Y +  A +
Sbjct: 174 RFLNRTKIIQAIRDYLNSLDFLEVETPVLHNIPGGAEARPFITHHNALDINLY-MRIALE 232

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  E ++R 
Sbjct: 233 LPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELETYCAYWDFHDVMDEAEGIIRA 291

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
             +                 D  I   GTD  DL       ++ +         F + ++
Sbjct: 292 AAKVV-------------SEDGKINYQGTD-IDLGKSFRRVHMVDLIKEKSGVDFWQPMT 337

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
            +   ++                 +N +    
Sbjct: 338 DDEAKKIAEEHGIQCEKFWKVGHVINAFFEEF 369



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 66/388 (17%), Positives = 117/388 (30%), Gaps = 43/388 (11%)

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R     ++ L    Q Y+Q  +                      R       +     ++
Sbjct: 142 RPLPDKYHGLQNVEQIYRQRYL------------DLISNQDSYKRFLNRTKIIQAIRDYL 189

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              D L     VL  +          +     I + +A+      +  L  P+    V +
Sbjct: 190 NSLDFLEVETPVLHNI-------PGGAEARPFITHHNALDINLYMRIALELPLKRLIVGD 242

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL- 363
                E     +   ++  +       +       F D M+E        G+     ++ 
Sbjct: 243 MERVYEIGRVFRNEGLDTHHNPEFTELETYCAYWDFHDVMDE------AEGIIRAAAKVV 296

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGDPLKFCSFAADARNHIAQ 422
            E G +   G             +   +  + G D    +  D  K           IA+
Sbjct: 297 SEDGKINYQGTDIDLGKSFRRVHMVDLIKEKSGVDFWQPMTDDEAK----------KIAE 346

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E GI     ++   +++  F+E   E   I      +  P       K N        ++
Sbjct: 347 EHGIQCEKFWKVGHVINA-FFEEFCE-GTIVDPTFVYGHPVEISPLAKKNKKDPRFTDRF 404

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGG 538
           ++   G E  +     +      Q F      +    +          RA + GMPP GG
Sbjct: 405 EIFILGKEYGNAFTELNDPIDQRQRFEAQMAERAAGNDEADMIDEDYIRAMEFGMPPTGG 464

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 465 LGIGIDRLVMLLTNAPAIRDVLLFPTMR 492


>gi|199598398|ref|ZP_03211817.1| Aspartyl/asparaginyl-tRNA synthetase [Lactobacillus rhamnosus
           HN001]
 gi|258508486|ref|YP_003171237.1| asparaginyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|199590717|gb|EDY98804.1| Aspartyl/asparaginyl-tRNA synthetase [Lactobacillus rhamnosus
           HN001]
 gi|257148413|emb|CAR87386.1| Asparaginyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259649796|dbj|BAI41958.1| asparaginyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 432

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 67/310 (21%), Positives = 116/310 (37%), Gaps = 32/310 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
              V   V +  W+   R  G I FL +RD           A+     F++AK +R E  
Sbjct: 11  KEHVNEEVTIGAWLTDKRSSGKIAFLQLRDGSAYFQGVVSKADVPDEVFQLAKELRQESS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I G++   S             E+  + IE++  + + P+     +E+       +R 
Sbjct: 71  MWITGVIHQDSRSHF-------GYEIEVRNIELVGDSHDYPITP---KEHGIEFLLDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR          R  +I +       E FI+   PILT S+PEG  +       ++ +
Sbjct: 121 LWLRSKRQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEGTTELFETDYFDKKA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y     A  + + F   P FR E  ++ R   EF+ ++ EM+F  Q++ L
Sbjct: 181 Y--LSQSGQLY-AEAGAMAYGKVFTCGPVFRAEKSKTRRHLTEFWMIEPEMAFCHQEESL 237

Query: 251 NTMENVLRGVFEEFSNGNTVSNN----------------FLRICYDDAIRRYGTDKPDLR 294
              E  +  + +   +      +                + RI Y  AI        D++
Sbjct: 238 KVQERYVAYMVQAVLDNCAYPLHLLGRDPEVLKKYTKLPYPRISYKKAIEMLQAAGMDVK 297

Query: 295 NPIIMHNVTE 304
                 +  E
Sbjct: 298 YGDDFGSPEE 307



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 15/133 (11%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D P +  N        A  PF M     +  +      +    Y       EI  G  R 
Sbjct: 315 DQPVFVLN-----YPKAIKPFYMLTDPEDEQQYVCADMLAPEGY------GEIIGGSERE 363

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + +  A    G+  +  E          + G  PH G   G++R +  +    ++RE
Sbjct: 364 TDYDKLKAAIEKAGLDLDEYE----WYLDLRKYGSVPHSGFGLGLERAITWICKLDHLRE 419

Query: 559 VSLFPMSQNFCDL 571
              FP   N    
Sbjct: 420 AIPFPRMINRLKP 432


>gi|196006055|ref|XP_002112894.1| hypothetical protein TRIADDRAFT_56497 [Trichoplax adhaerens]
 gi|190584935|gb|EDV25004.1| hypothetical protein TRIADDRAFT_56497 [Trichoplax adhaerens]
          Length = 535

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 76/346 (21%), Positives = 130/346 (37%), Gaps = 27/346 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL     G  V L   +H  R  G   FL +R       GI  V      A  + A +V 
Sbjct: 83  DLNEKVAGQSVLLRARLHNSRGKGKQCFLVLRQQSYSIQGIAAVSETVSKAMVKFASNVN 142

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-------- 118
            E V+ ++G+V + + +    +     +EL   K+ + S+A         +         
Sbjct: 143 KESVVDVEGIVKAVTTKIEACS--QQDVELHINKLFVASLAAPRLPLQIDDASRSVDQSS 200

Query: 119 ------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                    +  R   R +DLR  T          +    R  + ++ F+E  TP + ++
Sbjct: 201 EDSSLAHVNQDTRLDNRIIDLRTPTNQALFKLEAALCKLFRDHLTSKGFVEIHTPKIISA 260

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + EG  +    S     ++ A  Q+PQ YKQ+ +A  FDR F +   FR ED  + R   
Sbjct: 261 ASEGGANVFEVSYFKGKAYLA--QSPQLYKQMAIAGDFDRVFTVGGVFRAEDSNTHRHLC 318

Query: 233 EFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           EF  LD+EM+F E   ++L T+  +   +F+   + N      + +    A   +   +P
Sbjct: 319 EFVGLDLEMAFYEHYHEVLETIGELFISIFKGLRD-NFAEEIAVVMKQFPA-EPFQFIEP 376

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            LR  +           +   +  +     P  +      K   G 
Sbjct: 377 TLR--LEFPEAVSMLRENGVEIGDEDDLSTPNEKFLGKLVKAKYGT 420



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 72/209 (34%), Gaps = 30/209 (14%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD-PLKFCSFAADAR---NHIAQELGIINC 429
            + K L     E I V +     +   FI     L+F    +  R     I  E  +   
Sbjct: 346 SIFKGLRDNFAEEIAVVMKQFPAEPFQFIEPTLRLEFPEAVSMLRENGVEIGDEDDLSTP 405

Query: 430 NCFEFC-------WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           N  +F        +  DF   +      K   A  PF            N+     +  Y
Sbjct: 406 NE-KFLGKLVKAKYGTDFYMLD------KYPLAVRPFYTMPD------PNNPKQ--SNSY 450

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D+   G EI SG  R H  E + +      +       +      +F+ G  PH G   G
Sbjct: 451 DMFMRGEEILSGAQRIHDPEFLTERAKLHSVDL----EKIKAYIDSFKFGCFPHAGGGIG 506

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           ++R++ML LG  N+R+ S+FP        
Sbjct: 507 MERVLMLYLGLDNIRKTSMFPRDPKRLTP 535


>gi|149699374|ref|XP_001501628.1| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 1 [Equus caballus]
          Length = 597

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 62/308 (20%), Positives = 121/308 (39%), Gaps = 22/308 (7%)

Query: 6   THSCGDLGVSDVGS-----FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           TH   +      G       ++++G +H  R  G  +IF D+R      QV+AN  S  +
Sbjct: 104 THFIQEYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNY 161

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  +           G ++             G++ +   +I +LS      LP      
Sbjct: 162 KSEEEFIRINNKLRRGDIIGVQGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGL 218

Query: 120 YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
             +  R++ R+LDL  +   +   + R++II  +R  +    F+E  TP++        A
Sbjct: 219 KDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVA 278

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   
Sbjct: 279 KPFITYHNELDMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTC 336

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +  M++ +  D++   E ++ G+ +  +          ++ Y          + D   P 
Sbjct: 337 EFYMAYADYHDLMEITEKMISGMVKHITGSY-------KVTYHPDGPEGQAQEIDFTPPF 389

Query: 298 IMHNVTEH 305
              N+ E 
Sbjct: 390 RRINMVEE 397



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 477 KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 536

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 537 YGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFPAMK 572


>gi|195050025|ref|XP_001992811.1| GH13480 [Drosophila grimshawi]
 gi|193899870|gb|EDV98736.1| GH13480 [Drosophila grimshawi]
          Length = 558

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 69/349 (19%), Positives = 132/349 (37%), Gaps = 23/349 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G  + G+ V++ GWVHR+R  G  ++F+ +RD  G  Q V N        A  + +E  +
Sbjct: 130 GAQERGTRVKIYGWVHRLRRQGKSLMFITLRDGTGFVQCVLNDLLCQTYEAVVLNTESSV 189

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  EL+    E++ +A           E    ++   R +
Sbjct: 190 LLYGTLSLVPEG----KTAPGGHELNVDYWELIGLAPPGGADAILNEEANPDVQLDNRHI 245

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R+ ++ + R       + E + P L  +  EG          N+ ++
Sbjct: 246 MIRGENTSKVLKMRSVVMQAFRSHYFERGYTEVTPPTLVQTQVEGGSTLFKMQYFNEEAY 305

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  +D+LN
Sbjct: 306 --LTQSSQLYLETCLP-ALGDVFTIAQSYRAEQSRTRRHLAEYTHIEGECPFITFEDLLN 362

Query: 252 TMENVLRGVFEEFSNGNT-------------VSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            +E+++  V +                     +  F R+ Y DAI+         ++   
Sbjct: 363 RLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPTKPFRRMEYADAIKWLKEHNV-TKDDGT 421

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
            +   E    +  R  +  ++       +    K    +R   D R+ E
Sbjct: 422 FYEFGEDIPEAPERKMTDTINEPILLIKFPAEIKSFYMSRCKEDQRLTE 470



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R + SE +++ +   GI        +         G  PHGG   G+
Sbjct: 475 LLPNVGEIIGGSMRIYDSEELMKGYEREGIDPTP----YYWYTDQRVYGTTPHGGYGLGL 530

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  LL   ++REV L+P 
Sbjct: 531 ERFLCWLLNRYHIREVCLYPR 551


>gi|145630812|ref|ZP_01786590.1| asparaginyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983694|gb|EDJ91154.1| asparaginyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 467

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 127/388 (32%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 17  IGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYESEILRLTTGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   +E          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGKVVESPSEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           N V+++F
Sbjct: 250 MVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENFVNSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH        F   + V    +       
Sbjct: 310 AQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+ +    +G++       +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDKRMEEMGLNP----EDYWWYRDLRK 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 427 YGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPR 463


>gi|170726573|ref|YP_001760599.1| asparaginyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|169811920|gb|ACA86504.1| asparaginyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 466

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 71/420 (16%), Positives = 135/420 (32%), Gaps = 50/420 (11%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYG---ITQVVANPDSACFEIAKSVRSEWVLC 72
           +GS V + GWV   R    GI FL + D      I  VV N  +   +    + +   + 
Sbjct: 16  IGSQVTVRGWVRSRRDSKAGISFLAVYDGSCFDPIQGVVPNSLANYNDEILKLTAGCSVV 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+    +           EL   ++E+    E+        + +      +   L 
Sbjct: 76  MTGEVVDSPGKGQA-------FELQVTQVEVAGWVEDPDTYPMAAKRHSIEHLRELAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ---- 188
            R + +      R  +  ++      E FI  STP++TAS  EGA +    S ++     
Sbjct: 129 PRTNIIGAVARVRNSLSQAIHRFYNEEGFIWVSTPLITASDCEGAGEMFRVSTLDMENLP 188

Query: 189 ----------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      AS   + +   P FR E+  + R   EF+
Sbjct: 189 RTDEGKVDYSEDFFGKESFLTVSGQLNAETYASALSKVYTFGPTFRAENSNTSRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTDKPDL 293
            ++ E++F + DD+    E +L+  F+           F   R+      R       D 
Sbjct: 249 MVEPEVAFADLDDVAGLAEQMLKFCFKAVLEERRDDLEFFAQRVDKTVIERLESFVNSDF 308

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKI------------LSVNPGYEVWAIPAKGGGGNRAFC 341
              +   +  E   +   +    +                  ++   +        +AF 
Sbjct: 309 AQ-VDYTDAVEILKNCGKKFEYDVEWGIDLQSEHERYLAEEHFKAPVVVKNYPKDIKAFY 367

Query: 342 DRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
            R+NE        G       +   G    +G   +   +   +A    +++   D  ++
Sbjct: 368 MRLNE-------DGKTVAAMDVLAPGIGEIIGGAQREERLEVLDARLEEMNLSKEDYWWY 420



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 7/101 (6%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    EV+      + +SK      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGAQREERLEVLDARLEEMNLSK----EDYWWYRDM 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            + G  PH G   G +R+V  + G  N+R+V  FP +    
Sbjct: 424 RRYGTVPHSGFGLGFERLVSYVTGVSNIRDVIPFPRAPKSA 464


>gi|314923836|gb|EFS87667.1| lysyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
          Length = 1081

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 10/253 (3%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   DS   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDSMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686 HTVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+   ++ 
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 245 EQDDILNTMENVL 257
           +   + +    ++
Sbjct: 858 DYVQMRHLTREMI 870



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 472  NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYR 527
            +D     A ++DL+  G E+ +         +  + F+   +                  
Sbjct: 982  DDPR--LAEKWDLIIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLE 1039

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074


>gi|297621783|ref|YP_003709920.1| asparaginyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297377084|gb|ADI38914.1| asparaginyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 467

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 66/350 (18%), Positives = 133/350 (38%), Gaps = 51/350 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACF-EIAKSVRSEWVLCI 73
           +G  V + GWV  VR      F+++ D   ++  QV+A+P+   + ++A+ + +   + I
Sbjct: 19  IGKEVTIKGWVRTVRNQKTFTFIEVNDGSTLSNFQVIADPEIPNYQKLAEQLTTGTSVSI 78

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           +G ++    +          +E+ A+ I+I+   +    P+  +R   E +R     L  
Sbjct: 79  EGAIVESPGKGQA-------VEMQAKSIQIIGSCDVENYPLQKKRHSFEFLR-SIAHLRP 130

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG---- 189
           R +TL      R+ +  +       + FI   TP++TAS  EGA +    S ++      
Sbjct: 131 RTNTLGAVARVRSALAYATHKFFQEKGFIYVQTPVITASDCEGAGELFRVSTLDPEKAPR 190

Query: 190 ----------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+   A      Q    + A      +   P FR E+  + R   EF+ 
Sbjct: 191 NEQGGIDYSKDFFERPAFLTVSGQLNGEIFALSHSDIYTFGPTFRAENSNTSRHLAEFWM 250

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV---------------------SNNFL 275
           ++ EM+F + D  ++  E  ++ + +   +                           +F 
Sbjct: 251 VEPEMAFCDLDMDMDNAEAYVKFLLQYLMDNCQEDLEFFDKFISKGLIDRLKLIIETSFE 310

Query: 276 RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
           R  Y  A+R           P+   +   +EH  +   + F+K + +   
Sbjct: 311 RASYTYAMRILEKSGERFDYPVRWGLDLQSEHERYLSEKYFNKPVFITDY 360



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 44/132 (33%), Gaps = 24/132 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +I D+P     +E K       PF M     E    N  L        L     EI 
Sbjct: 353 KPVFITDYP-----KEIK-------PFYMRLNDDEKTVANMDL--------LFPKIGEII 392

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R      + +      ++ +             + G  PH G   G +R+V    G
Sbjct: 393 GGSQREERHGYLKERMKEAKMNLDDYW----WYMELREYGTAPHAGYGLGFERMVQFATG 448

Query: 553 AKNVREVSLFPM 564
            +N+R+V  FP 
Sbjct: 449 VENIRDVIAFPR 460


>gi|328712348|ref|XP_001951614.2| PREDICTED: lysyl-tRNA synthetase-like isoform 1 [Acyrthosiphon
           pisum]
          Length = 595

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 110/258 (42%), Gaps = 8/258 (3%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
                ++G VH +R  G  +IF D+R      QV+AN      E  +S  S+      G 
Sbjct: 123 DEKYSVAGRVHAIRESGPKLIFYDLRGEGVKIQVMANAKQYTTE--ESFLSDTSKIRRGD 180

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-R 135
           ++  +          G++ +  Q I++L+      LP        +  R++ R+LDL   
Sbjct: 181 IIGVTGSP--GKTKKGELSIFPQNIKLLTPCL-HMLPHMHYGLKDKETRYRQRYLDLIIN 237

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +    + R ++I+ +R  +    F+E  TP++   +        +    +      + 
Sbjct: 238 EHVRNKFIVRAKVISYVRRFLDNLGFLEIETPMMNMIAGGATAKPFITHHNDLNMDLFMR 297

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++   E+
Sbjct: 298 VAPELYHKMLVVGGIDRVYEIGRQFRNEAIDLTHNP-EFTTCEFYMAYADYNDLMQITED 356

Query: 256 VLRGVFEEFSNGNTVSNN 273
           +L G+ +       +  +
Sbjct: 357 LLSGLVKSIYGTYKIKYH 374


>gi|332221730|ref|XP_003260017.1| PREDICTED: lysyl-tRNA synthetase isoform 1 [Nomascus leucogenys]
          Length = 597

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 59/287 (20%), Positives = 115/287 (40%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 127 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFIHINNKLRRGDIIGV 184

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +   +I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 185 QGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 241

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 242 QKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 300

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ 
Sbjct: 301 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMVS 359

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          ++ Y            D   P    N+ E 
Sbjct: 360 GMVKHITGSY-------KVTYHPDGPEGQAYDIDFTPPFQRINMVEE 399



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 479 KEGLTERFELFVMKKEICNAYTELNDPMQQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 538

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 539 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMK 574


>gi|229847451|ref|ZP_04467548.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229809592|gb|EEP45319.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|309973185|gb|ADO96386.1| Asparaginyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 467

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 127/388 (32%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 17  IGETVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIKNYESEILRLTTGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   +E          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGKVVESPSEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           N V+++F
Sbjct: 250 MVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENFVNSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH        F   + V    +       
Sbjct: 310 AQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+ +    +G++       +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDKRMEEMGLNP----EDYWWYRDLRK 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 427 YGTVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPR 463


>gi|265767787|ref|ZP_06095319.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|263252459|gb|EEZ23987.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301164754|emb|CBW24313.1| asparaginyl-trna synthetase [Bacteroides fragilis 638R]
          Length = 467

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 59/295 (20%), Positives = 108/295 (36%), Gaps = 29/295 (9%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     +   D G+ V + GWV   R    + F+ + D   I  V    D A F
Sbjct: 1   MEKISRTKIVDLMKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQVVVDLANF 60

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+ K + +   L ++G++         A       E+ A++IE+L   +        +
Sbjct: 61  DEEMLKQITTGACLSVNGVLTESVGAGQKA-------EVQAREIEVLGTCDNTYPLQ--K 111

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           + +      +   L  R +T       R  +  ++      + F    TPI+TAS  EGA
Sbjct: 112 KGHSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGA 171

Query: 178 RDFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
                 + +N                 F+    +     Q +  L A+     +   P F
Sbjct: 172 GQMFQVTTMNLYDLKKDENGSIVYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F E  + ++  E  ++       +       FL
Sbjct: 232 RAENSNTPRHLAEFWMIEPEVAFNEIQENMDLAEEFIKYCVRWALDNCADDVKFL 286



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 4/87 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L     EI  G  R      ++     + I  + +           + G  PH G   G 
Sbjct: 384 LFPKIGEIIGGSERESDYNKLMTRIEEMHIPMKDMW----WYLDTRKFGTCPHSGFGLGF 439

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +R+++ + G  N+R+V  FP +    D
Sbjct: 440 ERLLLFVTGMSNIRDVIPFPRTPRNAD 466


>gi|325285592|ref|YP_004261382.1| Lysyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324321046|gb|ADY28511.1| Lysyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 563

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 69/343 (20%), Positives = 128/343 (37%), Gaps = 33/343 (9%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS--EWVLCI 73
           + G  V +SG +   R  G   F +++D  G  QV  N D  C    K++ +     L  
Sbjct: 44  EEGKQVVISGRLMSRRIQGKASFAELQDGEGRVQVYFNRDEICTGDDKTLYNDVYKKLLD 103

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRF 126
            G ++    +     +  G+  +  +K  ILS +         + E           +R+
Sbjct: 104 IGDIIGIEGDLFTTQV--GEKTVMVKKFTILSKSLRPLPLPKVDSEGKVFDEFNDPELRY 161

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+ DL  +   K   VKRT++ N+MR       + E  TPIL        AR F+   
Sbjct: 162 RRRYADLVVNPHVKEVFVKRTKLFNAMRSFFNDAGYFEVETPILQPIPGGAAARPFITHH 221

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +S+ 
Sbjct: 222 NSLDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDKTHNP-EFTAMEIYVSYK 279

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHN 301
           + + +++  E +L       +  +  +              +G  K D + P   + M +
Sbjct: 280 DYNWMMDFCEKLLEHCAIAVNGTSEAT--------------FGEHKIDFKAPYARVTMAD 325

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
             +HF   +         +    +   I      G     D +
Sbjct: 326 SIKHFTGFDITG-KTEAEIFEAAKGMGIEVDATMGKGKLIDEI 367



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 5/123 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 373 EGNYIQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSELNDPIDQRERF 432

Query: 509 SNVGISKEVVENRF-----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +        ++           RA + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 433 EHQLKLAAKGDDEATEFIDEDFLRALEYGMPPTSGMGIGMDRLIMFLTNNQSIQEVLFFP 492

Query: 564 MSQ 566
             +
Sbjct: 493 QMK 495


>gi|313829497|gb|EFS67211.1| putative lysyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
          Length = 988

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 10/253 (3%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686 HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+   ++ 
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 245 EQDDILNTMENVL 257
           +   + +    ++
Sbjct: 858 DYVQMRHLTREMI 870


>gi|284043972|ref|YP_003394312.1| lysyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283948193|gb|ADB50937.1| lysyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 1118

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 66/307 (21%), Positives = 121/307 (39%), Gaps = 20/307 (6%)

Query: 5   RTHSCGDLGVS--------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           R  +  +L  S        + G  V+++G V  +R HGG+ F D+ D  G  Q++A  D 
Sbjct: 53  RDATAAELHDSFAELAPGTETGETVKVAGRVTALRRHGGLDFADLLDETGTIQLLAERDE 112

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +  +   +  +    G  +      + +   +G++ +   +  +LS A   PLP   
Sbjct: 113 LGEQALEDFAALDL----GDWVGAEGTVVASK--SGELTVRLARFALLSKALR-PLPDLR 165

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
                   R++ R++DL  +   + +   R+  I+++R  +    F E  TP+L   +  
Sbjct: 166 HGLTDPEARYRRRYVDLVVNPRARAVFAARSVAISAVRRVLTERGFREVETPVLLGQAGG 225

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             A+ FL           +L  A +   + L+  G DR F+I   FR+E   +   P EF
Sbjct: 226 AAAKPFLTHHNALDIEM-SLRIALELPLKRLLVGGMDRVFEIGRVFRNEGLDTRHNP-EF 283

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT-DKPDL 293
             L+   +F +  D++   E ++       +    V      I      RR    D    
Sbjct: 284 TLLEAYQAFGDYSDMMELTETLVSEAALAANGTTVVRVGEREIDLRPPFRRARMTDLIKE 343

Query: 294 RNPIIMH 300
              + MH
Sbjct: 344 HGGVEMH 350



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 25/143 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            +      E  ++MD P      E   +  AH               +D       +++L
Sbjct: 385 ELCESKLIEPTFVMDHP-----REISPLARAHR--------------DDP--TLTERFEL 423

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMPPHGGIA 540
           V  G E+A+     +        F+     +    E  E       +A + G+PP GG+ 
Sbjct: 424 VVAGRELANAYSELNDPVDQAARFAYEAQQQAGGDEEAEPVDDDYVQALEYGLPPTGGLG 483

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            GIDR++ML+ G +++R+V LFP
Sbjct: 484 IGIDRLIMLITGVESIRDVILFP 506


>gi|153952771|ref|YP_001393536.1| asparaginyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219853437|ref|YP_002470559.1| hypothetical protein CKR_0094 [Clostridium kluyveri NBRC 12016]
 gi|189083270|sp|A5N4F7|SYN_CLOK5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|146345652|gb|EDK32188.1| AsnS [Clostridium kluyveri DSM 555]
 gi|219567161|dbj|BAH05145.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 463

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 75/415 (18%), Positives = 139/415 (33%), Gaps = 59/415 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWV 70
               +   + +SGW+  +R      F+++ D      V    +     F+    +     
Sbjct: 13  TEKFIDKDIEISGWIRTIRDSKSFAFIELNDGSFFKNVQVVLDDKIENFKEIIKLPISSS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L ++G ++                E+ A+KI +   +     P+  +R   E +R     
Sbjct: 73  LSVEGTLILTP-------NAKQSFEIKAKKISLEGNSSS-EYPLQKKRHTLEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++      ++F+  +TPI+T S  EGA +    + ++   
Sbjct: 124 LRPRSNTFSAVFRVRSIAAYAVHKFFQEKDFVYVNTPIITGSDCEGAGEMFRITTMDLNN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q     MA  F   +   P FR ED  + R   E
Sbjct: 184 VPKEEDNSVDFSKDFFGKETNLTVSGQLSAETMALAFRNVYTFGPTFRAEDSNTSRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSN 272
           F+ ++ EM+F E  D ++T E +++ +                            N V++
Sbjct: 244 FWMIEPEMAFAELKDYMDTAEELVKYIINYVLEKAPEEMAFFNSFIDKSLFDRLNNVVNS 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
            F RI Y +A+          + P+   +   TEH  +   +VF K     P +      
Sbjct: 304 EFGRITYTEAVDILQKSGASFQYPVEWGIDLQTEHERYLTEKVFEK-----PIFVTDYPK 358

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE 385
           A      R   D     A     PG+  I   +  S     +  + K ++     
Sbjct: 359 AIKAFYMRENEDGKTVAAADLLVPGVGEI---VGGSQREERLSVLEKRISEFGLN 410



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 49/149 (32%), Gaps = 24/149 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +  ++ D+P             A   F M +               A  
Sbjct: 338 HERYLTEKVFEKPIFVTDYP------------KAIKAFYMRENED--------GKTVAAA 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R     V+ +  S  G++K      +       + G   H G   
Sbjct: 378 DLLVPGVGEIVGGSQREERLSVLEKRISEFGLNK----EDYWWYLELRKYGETKHSGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G +RI+M + G  N+R+V  FP +    +
Sbjct: 434 GFERILMYITGMSNIRDVIPFPRTPGSAE 462


>gi|157951696|ref|NP_705819.3| probable asparaginyl-tRNA synthetase, mitochondrial precursor [Mus
           musculus]
 gi|81873734|sp|Q8BGV0|SYNM_MOUSE RecName: Full=Probable asparaginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS;
           Flags: Precursor
 gi|26338379|dbj|BAC32875.1| unnamed protein product [Mus musculus]
 gi|26338574|dbj|BAC32958.1| unnamed protein product [Mus musculus]
 gi|26341458|dbj|BAC34391.1| unnamed protein product [Mus musculus]
 gi|74209761|dbj|BAE23597.1| unnamed protein product [Mus musculus]
 gi|74211175|dbj|BAE37666.1| unnamed protein product [Mus musculus]
          Length = 477

 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 67/303 (22%), Positives = 123/303 (40%), Gaps = 21/303 (6%)

Query: 12  LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           L V D  G  V + GW+  VR    ++FL + D   +  +    DS+    ++ +     
Sbjct: 34  LRVQDARGECVTVQGWIRSVRSQKEVLFLHVNDGSSLESLQIVADSSF--DSRELTFGSS 91

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++   ++  N       +EL A+KIE++   E    P+  +  +P     +Y  
Sbjct: 92  VQVQGQLVKSQSKRQN-------VELKAEKIEVIGDCEAKAFPIKYKERHPLEYLRQYPH 144

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP------- 183
           L  R + L   +  R+    ++        F+   TP+LT++  EGA +           
Sbjct: 145 LRCRTNALGSILRVRSEATAAIHSYFKDNGFVHIHTPVLTSNDCEGAGELFQVEPSSKIK 204

Query: 184 -SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             + +     A      Q    +M+  F + F   P FR E+ +S R   EFY ++ E+S
Sbjct: 205 GPKESFFDVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEIS 264

Query: 243 FVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           FVE   D++  ME + +   E   +               A  + G  +  L+N  ++ +
Sbjct: 265 FVESLQDLMQVMEELFKATTEMVLSHCPEDVELC--HQFIAAGQKGRLEHMLKNNFLIIS 322

Query: 302 VTE 304
            TE
Sbjct: 323 YTE 325



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 25/137 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             +++++P                PF M +            +  A   DL+  G  E+ 
Sbjct: 363 PVFVINYP------------SELKPFYMRENED------GPQNTVA-AVDLLVPGVGELF 403

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G +R     V+ Q  +  G++K      +       + G  PHGG   G +R +  +LG
Sbjct: 404 GGSLREERYHVLEQRLARSGLTKA-----YQWYLDLRKFGSVPHGGFGMGFERYLQCILG 458

Query: 553 AKNVREVSLFPMSQNFC 569
             N+++V  FP   + C
Sbjct: 459 VDNIKDVIPFPRFTHSC 475


>gi|118575805|ref|YP_875548.1| aspartyl/asparaginyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118194326|gb|ABK77244.1| aspartyl/asparaginyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 425

 Score =  181 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 77/297 (25%), Positives = 136/297 (45%), Gaps = 24/297 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R H   D+     G  V L+GWV  +R  G + F+ +RD  G+ Q+V             
Sbjct: 6   RIH-IADMAKPMAGQKVLLAGWVEDLRELGKVSFVTLRDATGLAQIVVKGGLQA--SMDG 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPES 123
           +  + V+ + G V    A          ++E+SA++I++LS A   LP+   G  E    
Sbjct: 63  LTRQSVVAVSGTVAETRARDF-------EVEVSAEQIDVLSRAIHPLPIDPLGRLESGMD 115

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R   R LD+R          R R++ S+R  +    F E +TP +  S+ EG  +    
Sbjct: 116 NRLNARALDMRNQKTASIFRLRHRVLESLRQGLSKRRFTEITTPKIIGSASEGGANLFSL 175

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++ A  Q+PQ YK+  M  G +R ++I+  +R E+  + R   EF  +D+E +F
Sbjct: 176 EYFGKTAYLA--QSPQLYKEQ-MTMGLERVYEISGFYRAENSHTGRHLSEFTSVDIEAAF 232

Query: 244 VEQDDILNTMENVLRG---------VFEEFSNGN-TVSNNFLRICYDDAIRRYGTDK 290
           ++  D+++ +E ++R          + +E +     V ++  RI Y  A+   G+D 
Sbjct: 233 MDYTDVMDVLEQLVREACVAASECTIEQEATGHKAEVPSDIPRITYSQAVDELGSDC 289



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 10/127 (7%)

Query: 451 KIDFAHNPFTMPQGGMES------LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
           ++    +P         +      ++  D  +  +  +DL     E++SGG R H   ++
Sbjct: 303 RLLGEKHPGYYFLTDWPTKLKPFYIRPKDDDAEVSRSFDLQHGYLELSSGGSRLHDPSIL 362

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  G+   +    F    RAF  GMPPH G   G+DR + +L+G  NVRE  L+P 
Sbjct: 363 RSRLEQQGLDPAL----FADHLRAFDWGMPPHSGWGMGLDRFMAVLVGVDNVREAVLYPR 418

Query: 565 SQNFCDL 571
             +    
Sbjct: 419 DPDRLSP 425


>gi|302845072|ref|XP_002954075.1| hypothetical protein VOLCADRAFT_76143 [Volvox carteri f.
           nagariensis]
 gi|300260574|gb|EFJ44792.1| hypothetical protein VOLCADRAFT_76143 [Volvox carteri f.
           nagariensis]
          Length = 641

 Score =  181 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 87/564 (15%), Positives = 176/564 (31%), Gaps = 114/564 (20%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           + G  +  + V ++G +   R  G  ++F D++      Q++A+  ++   + ++  +  
Sbjct: 173 ESGQQEPETTVSVAGRIFSKRASGSKLLFYDLKADGVKIQIMADARNSDLSL-EAFTAVH 231

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
             C  G ++    E        G++ +  +K  +LS       P        +  R++ R
Sbjct: 232 NECKRGDIVGV--EGFPGKSKKGELSIFPRKFVLLSPCL-HMPPSAHFGLKDQETRYRQR 288

Query: 130 FLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +T +      R+RII  +R  +    F+E  TP++        AR F+      
Sbjct: 289 YLDLIVNTDVRNIFYTRSRIIQFVRRFLDTRGFLEVETPMMNMIPGGAAARPFITHHNDL 348

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y +  AP+ + ++L+  G +R                                   
Sbjct: 349 DMKLY-MRIAPELFLKMLVIGGLER----------------------------------- 372

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
                    +  +  +F N      +       +  + Y              +  +   
Sbjct: 373 ---------VYEIGRQFRNEGIDLTHNPEFTTCEFYQAYA-------------DYKDLLG 410

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESG 367
            +E  +   +L +   Y++   P +G        D    W R     GL           
Sbjct: 411 MTESLISQMVLEIKGSYKIQYHP-EGPEKPSIEIDFTPPWRRISMVSGL----------- 458

Query: 368 NVAGMG-PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426
               +G  +   L       + + L  +           P               +E  +
Sbjct: 459 -EECLGIKLPTDLESEEARQLLIDLCAKHD----VNCPAPQTTARLLDKLVGEFLEEQCV 513

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
                    +I D                 +P  M        +  +       +++L  
Sbjct: 514 ------NPTFICD-----------------HPQLMSPLAKWHRELPN----MTERFELFI 546

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAG 542
           N  E+ +     +      + F +   +K   ++           A + G+PP GG   G
Sbjct: 547 NKREVCNAYTELNDPIKQRELFQDQAKAKSAGDDEAMFIDETFCTALEYGLPPTGGWGLG 606

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQ 566
           IDR+ MLL    N++EV LFP  +
Sbjct: 607 IDRMTMLLTDTCNIKEVLLFPAMK 630


>gi|288870132|ref|ZP_06113061.2| asparagine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288868250|gb|EFD00549.1| asparagine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 497

 Score =  181 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 63/353 (17%), Positives = 116/353 (32%), Gaps = 51/353 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   + + GWV  +R      F+ + D       QVV +     F     +     
Sbjct: 47  REQYLNKEISVGGWVRSLRDSKAFGFIVLSDGTYFETLQVVYHDTMDNFSEISRLSVGTA 106

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L I G +++               E+ A +I I   +     P+  +R   E +R     
Sbjct: 107 LIIKGTLVATPE-------AKQPFEIQATEIVIEGASSPDY-PLQKKRHSFEYLR-TISH 157

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +T       R+ I  ++       +F+   TP++T S  EGA +    + ++   
Sbjct: 158 LRPRTNTFQAVFRVRSLIAYAIHQFFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDLND 217

Query: 191 --------------FYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+  P       Q      A  F   +   P FR E+  + R   E
Sbjct: 218 IPKTDEGKVDFSQDFFCKPTNLTVSGQLNAETYAMAFRNVYTFGPTFRAENSNTTRHAAE 277

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ EM+F + +D +   E++L+ V     +      NF                   
Sbjct: 278 FWMIEPEMAFADLNDDMELAESMLKYVIGYVLDHAPEEMNFFNQFVDKGLLDRLHHVLNS 337

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
               + Y +A+        +    +       TEH  +   ++F K + V   
Sbjct: 338 EFAHVTYTEAVELLEKHNDEFDYKVFWGCDLQTEHERYLTEQLFKKPVFVTDY 390



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P     +E K        F M           D  ++ A    LV    EI 
Sbjct: 383 KPVFVTDYP-----KEIK-------AFYMKM-------NPDNKTVAAVDC-LVPGIGEII 422

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + +      +G+ KE  +          + G   H G   G +R VM L G
Sbjct: 423 GGSQREDDYDKLTARMDELGLKKEDYQ----FYLDLRKYGSTRHAGFGLGFERCVMYLTG 478

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N C+L
Sbjct: 479 MSNIRDVVPFPRTVNNCEL 497


>gi|125972594|ref|YP_001036504.1| asparaginyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256005156|ref|ZP_05430125.1| asparaginyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281416785|ref|ZP_06247805.1| asparaginyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|166231663|sp|A3DBI2|SYN_CLOTH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|125712819|gb|ABN51311.1| asparaginyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255990903|gb|EEU01016.1| asparaginyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281408187|gb|EFB38445.1| asparaginyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316941168|gb|ADU75202.1| asparaginyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 464

 Score =  181 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 71/355 (20%), Positives = 122/355 (34%), Gaps = 46/355 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
               VG  + ++GWV  VR      F+++ D      +    +       K +    V  
Sbjct: 13  TKDYVGKEIVVAGWVRTVRDSKAFGFIELNDGSFFKNLQIVFEEKNLPNFKEIAKLSV-- 70

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +    E +         EL A KIEI   A     P+  +R   E +R     L 
Sbjct: 71  --GSAIIAHGELVETPGAKQPFELKATKIEIEG-ASTPDYPLQKKRHSFEYLR-TIAHLR 126

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R +T       R+ +  ++        F+   TPI+T S  EGA      + ++  +  
Sbjct: 127 PRTNTFSAVFRVRSLLAYAIHKFFQERGFVYVHTPIITGSDAEGAGQMFKVTTLDINNPP 186

Query: 193 AL-----------------PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                                   Q +    +  F   +   P FR E+  + R   EF+
Sbjct: 187 RKEDGTVDFSKDFFDRETNLTVSGQLEGETYSMAFRNIYTFGPTFRAENSNTARHAAEFW 246

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFE----------EFSN-----------GNTVSNNF 274
            ++ E++F + +D +   E++L+ +            EF N            N VS++F
Sbjct: 247 MVEPEIAFADLEDDMELAEDMLKYIINYCLENAPEEMEFFNNFIDNTLLDRLNNIVSSDF 306

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHN--VTEHFVHSEFRVFSKILSVNPGYEVW 327
             + Y +AI            P+   N   TEH  +   +VF K + V    +  
Sbjct: 307 AHVTYTEAIDILSKADQKFEYPVKWGNDLQTEHERYLTEKVFKKPVFVTDYPKDI 361



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 55/150 (36%), Gaps = 26/150 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +  ++ D+P        K I      F M          +D  ++ A  
Sbjct: 339 HERYLTEKVFKKPVFVTDYP--------KDIKA----FYMR-------LNDDNKTVAAM- 378

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  EI  G  R    + +      +G+    +E+ +       + G   H G  
Sbjct: 379 -DLLVPGVGEIIGGSQREERLDYLENRMKELGLK---MEDYW-WYLDLRRYGSTRHAGFG 433

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R +M + G  N+R+V  FP + +  +
Sbjct: 434 LGFERAIMYITGMSNIRDVIPFPRTVHSAE 463


>gi|229829267|ref|ZP_04455336.1| hypothetical protein GCWU000342_01354 [Shuttleworthia satelles DSM
           14600]
 gi|229792430|gb|EEP28544.1| hypothetical protein GCWU000342_01354 [Shuttleworthia satelles DSM
           14600]
          Length = 474

 Score =  181 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 125/376 (33%), Gaps = 63/376 (16%)

Query: 15  SDVG-SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWV 70
            D G   V + GWV  +R      F+ + D    T V         A +E          
Sbjct: 24  EDYGEKEVTVGGWVRSIRNSKNFSFMVLNDGSFFTPVQVVFSADKLANYEEISHQNVGAA 83

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + GLV            +    E+ A +IE+   +     P+  +R   E +R     
Sbjct: 84  VWVTGLVTLTPE-------MKQPFEIQATEIEVEGPS-TPDYPLQKKRHTLEYLRTL-PH 134

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +T       R+    ++       +F+   TPILT+S  EGA +    + ++   
Sbjct: 135 LRARTNTFEAAFRVRSVAAYAIHKFFQERDFVYTHTPILTSSDAEGAGEMFQATTLDLKD 194

Query: 191 --------------FYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         FY  P       Q +    A  F + +   P FR E+  + R   E
Sbjct: 195 VPVDEKGNVDFTQDFYGKPVNLTVSGQLQGETFAQAFKKIYTFGPTFRAENSNTTRHAAE 254

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F + +D +   E +L+ V             F                   
Sbjct: 255 FWMIEPEIAFADLEDAMELAEAMLKYVIAYVMEHCPEEIAFFNSFVDKGLIDRLNHVVRS 314

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              RI Y DA+        +    +       TEH  +   ++F + + V    +     
Sbjct: 315 DFGRISYTDAVAELEKHNDEFEYKVFWGCDLQTEHERYLTEKIFKRPVFVTDYPKEI--- 371

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  ++NE
Sbjct: 372 -------KAFYMKLNE 380



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K        F M           D  ++ A    LV    EI 
Sbjct: 360 RPVFVTDYP-----KEIK-------AFYMK-------LNEDGRTVAAVDC-LVPEIGEII 399

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + +L      G+     E+ +G      + G   H G   G +R+VM L G
Sbjct: 400 GGSQREDDYDKLLSRIRENGMD----ESTYGYYLDLRKYGSTRHAGFGLGFERLVMYLTG 455

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP +   C+L
Sbjct: 456 IANIRDVLPFPRTVGNCEL 474


>gi|219849235|ref|YP_002463668.1| lysyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219543494|gb|ACL25232.1| lysyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 496

 Score =  181 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 64/314 (20%), Positives = 117/314 (37%), Gaps = 23/314 (7%)

Query: 5   RTHSCGDLGVS----DVGS-FVRLSGWVH-RVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           R+H+ G +  +      G   V L+G +    R  G I F  I D  G  Q+  +     
Sbjct: 34  RSHTIGQVLAAFDELAAGEAVVTLAGRIIGARRVMGKIAFAHIEDGTGEIQLWLSRADLG 93

Query: 59  FEIAKSVR----SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            E  +  R    +  ++   G +             TG+  L  +++ +L+ A   P P 
Sbjct: 94  DEWFERFRDQIDTFDIVQATGTLRRT---------KTGERSLFVREMAVLAKA-INPPPE 143

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASS 173
                     R + R+LDL  +   ++I + R +++++MR  +    F+E  TP+L    
Sbjct: 144 KWAGLQDVEERHRQRYLDLIVNRERRDIFRARAQVMSTMRRVLDDRGFLEVETPVLQPIY 203

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    V      G    L  A + Y + L+  GF   ++I   FR+E       P E
Sbjct: 204 GGAAARPFVTYHNALGQNLYLRIATELYLKRLIVGGFPGVYEIGKNFRNEGVDRSHNP-E 262

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT-DKPD 292
           F  ++   ++ +   ++  +E +L  +        T+S     +       R    D   
Sbjct: 263 FTMMECYQAYADYHAMMTLVEEMLGEICLAVHGTTTISYQGRELDLRPPWPRIAMADAIV 322

Query: 293 LRNPIIMHNVTEHF 306
            R  I +   T+  
Sbjct: 323 ERTGIDITRHTDLD 336



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 51/141 (36%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +  + F+  +I+D+P             A +P      G               +++   
Sbjct: 367 VQPHLFQPTFIIDYP------------VAMSPLAKRIPGRPDF---------TERFEAFI 405

Query: 487 NGFEIASGGIRNHMSEVMLQAFSN----VGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
            G EI +     +      + F           E           A + GMPP GG+  G
Sbjct: 406 AGMEIGNAFTELNDPFDQEERFREQLRAFAAGDEEAHQMDEDFINALRYGMPPTGGLGIG 465

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR+VM+L    ++REV LFP
Sbjct: 466 IDRLVMVLTDQASIREVILFP 486


>gi|152978960|ref|YP_001344589.1| asparaginyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704331|sp|A6VNV7|SYN_ACTSZ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|150840683|gb|ABR74654.1| asparaginyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 467

 Score =  181 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 127/388 (32%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA--NPDSACFE-IAKSVRSEWVLC 72
           VG  V + GWV   R    G+ FL + D      + A  N D   +E     + +   + 
Sbjct: 17  VGEKVTVRGWVRTRRDSKAGLSFLTVYDGSCFNPIQAIINNDIVNYESEVLRLTAGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   A+          +EL  + +E++   E+        + +      +   L 
Sbjct: 77  VTGTVVESPAQGQA-------VELQTETVEVVGWVEDPDTYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+   A      Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RTQAGTVDFNQDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           + V++ F
Sbjct: 250 MVEPEIAFATLADNAKLAEDMLKYVFNAVLTERRDDLEFFSKHVDKDVITRLEHFVNSPF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH  +     F   + V    +       
Sbjct: 310 AQIDYTDAIDVLVKSGKKFEFPVSWGIDLSSEHERYLAEEHFKSPVVVKNYPKGI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+ +    +G+        +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDKRMVEMGLKP----EDYWWYRDLRK 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP S  
Sbjct: 427 YGTVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRSPR 463


>gi|256028529|ref|ZP_05442363.1| asparaginyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766448|ref|ZP_06525826.1| asparaginyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289718003|gb|EFD82015.1| asparaginyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 461

 Score =  181 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 70/390 (17%), Positives = 125/390 (32%), Gaps = 56/390 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
           G   +   + L GWV ++R      F+++ D       Q+V       F+    +     
Sbjct: 11  GEDYLNKEIELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSISST 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++               +E+ A KIEI   A+ L  P+  +R   E +R K   
Sbjct: 71  IKVKGTLVKSQGSG-------QDLEVKADKIEIFQKAD-LEYPLQNKRHTFEYLRTK-AH 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++       NF+   TPI+T S  EGA +    + ++   
Sbjct: 122 LRPRTNTFSAVFRVRSVLAYALHKFFQENNFVYVHTPIITGSDAEGAGEMFRVTTLDMNK 181

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       + F   +   P FR E   + R   E
Sbjct: 182 LPKKENGEVDFTKDFFGKSTNLTVSGQLNVETFCAAFRNVYTFGPTFRAEYSNTARHASE 241

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +    +   E +++ V +   +       F                   
Sbjct: 242 FWMVEPEIAFADLSANMELAEAMVKFVIKYVMDTCPEEMEFFNSFIEKGLFNKLNNVLNN 301

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              RI Y +AI            P+   +   +EH  +     F K     P +      
Sbjct: 302 EFGRITYTEAIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYFKK-----PVFVTDYPK 356

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                  +   D     A     PG+  I 
Sbjct: 357 EIKAFYMKLNEDGKTVRAMDLLAPGIGEII 386



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P     +E K        F M           D  +++A   DL+  G  EI
Sbjct: 347 KPVFVTDYP-----KEIK-------AFYMK-------LNEDGKTVRAM--DLLAPGIGEI 385

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    E++L+    +G++    E  +       + G  PH G   G +R++M L 
Sbjct: 386 IGGSQREDSYEILLKRMKELGLN----EEDYEFYLDLRRFGSFPHSGYGLGFERMMMYLT 441

Query: 552 GAKNVREVSLFPMSQN 567
           G +N+R+V  FP + N
Sbjct: 442 GMQNIRDVIPFPRTPN 457


>gi|301156337|emb|CBW15808.1| asparaginyl tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 467

 Score =  181 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 127/388 (32%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 17  IGEKVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIVNNDIENYESEVLRLTTGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G ++   AE          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGTIVESPAEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RGEDGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           N V+++F
Sbjct: 250 MVEPEVAFATLADNAKLAEDMLKYVFRAVLTERKDDLKFFEKHVDKDVITRLENFVNSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH        F   + V    +       
Sbjct: 310 AQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+ +    +G++       +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDKRMEEMGLNP----EDYWWYRDLRK 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 427 YGTVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPR 463


>gi|315223369|ref|ZP_07865228.1| lysine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314946700|gb|EFS98689.1| lysine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 562

 Score =  181 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 58/289 (20%), Positives = 114/289 (39%), Gaps = 20/289 (6%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           + G  V ++G +  +R  G   F  ++D  G  Q+  N D  C    K++ +E    +  
Sbjct: 43  EEGKQVVVAGRLMSLRVQGKASFATLQDSEGTMQLYFNRDEMCPTDDKTLYNEVFKKLLD 102

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKY 128
           L     AE        G+  +  +   +LS           + +            R++ 
Sbjct: 103 LGDFIGAEGTLFITKMGEKTVLVKNFTLLSKVLRPLPMPKVDADGKVHDAFTDPEQRYRM 162

Query: 129 RFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R++DL  +   K   +KRT++ N+MR       ++E  TPIL A      AR F+     
Sbjct: 163 RYVDLVVNPQVKEVFIKRTKLFNAMRQFFNDAGYLEVETPILQAIPGGASARPFITHHNA 222

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ + 
Sbjct: 223 LDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKDY 280

Query: 247 DDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY 286
             +++  E ++       +                 + R+   DAI+++
Sbjct: 281 HWMMDFTERLIEHCAIAVNGTTKATFGKHTVDFKAPYPRLTMTDAIKQF 329



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 8/113 (7%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           P  M     E     DL      +++L+  G EIA+     +      + F       E 
Sbjct: 385 PKEMSPLTKEHRYNPDL----TERFELMVCGKEIANAYSELNDPIDQRERFEEQLRLSEK 440

Query: 518 VENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            ++          RA + GMPP  G+  G+DR+VM L   ++++EV  FP  +
Sbjct: 441 GDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLVMFLTNNESIQEVLFFPQMR 493


>gi|283850394|ref|ZP_06367683.1| asparaginyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283574420|gb|EFC22391.1| asparaginyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 466

 Score =  181 bits (458), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 129/364 (35%), Gaps = 52/364 (14%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC 58
           M   RT     L  +     +R+ GWV   R   G  FL+I D   +   QV+     A 
Sbjct: 1   MSIRRTTVKAALESAGACPEIRVMGWVRTRRDAKGFSFLEINDGSCLSNLQVLVEEGIAG 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            ++ K + +   + + G +++   +         + E+ A  + +L  A+    P+  +R
Sbjct: 61  ADLVKDLGTGAAVDVAGALVASPGKG-------QRFEVKATALTLLGGADTEAYPLQKKR 113

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R     L  R +     +  R  +  ++        F    TPI+T S  EGA 
Sbjct: 114 HSDEFLR-TIAHLRPRTNKYGAMLRLRAALGQAVHAFFAERGFYWVHTPIITGSDCEGAG 172

Query: 179 DFLVPSRVNQG----------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPC 219
           +    + ++                   F+   A      Q     +A    R +   P 
Sbjct: 173 EMFRVTALSAAEAAAEAVLPPAERGSRDFFGKDAYLTVSGQLTAEPLACALGRVYAFGPT 232

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFS 265
           FR E   + R   EF+ ++ EM+F + +D +   E +L+ +              F ++ 
Sbjct: 233 FRAEHSDTSRHAAEFWMVEPEMAFADLEDNMELGEGLLKHMVRVAMEDCAEDFGLFAKYV 292

Query: 266 NGNTVSN-------NFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK 316
           +              F+R+ Y +A++     K     P+       +EH  +     F +
Sbjct: 293 DPKLPETLATLLDAPFVRLPYAEAVKILLAAKKTFEYPVADGRDLQSEHERYLTEEHFKR 352

Query: 317 ILSV 320
            + V
Sbjct: 353 PVVV 356



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 70/217 (32%), Gaps = 30/217 (13%)

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ-----DGDSCFFIAGDPLKF 409
           GL     R+         G  AK+++    E +   LD         ++   +      F
Sbjct: 268 GLLKHMVRVAMEDCAEDFGLFAKYVDPKLPETLATLLDAPFVRLPYAEAVKILLAAKKTF 327

Query: 410 CSFAADAR-NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
               AD R      E  +   +      + D+P        K I      F M Q     
Sbjct: 328 EYPVADGRDLQSEHERYLTEEHFKRPVVVYDYP--------KDIKA----FYMRQ----- 370

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              ND     A    LV    EI  G  R    + +       G+        +G     
Sbjct: 371 ---NDDGRTVAAMDVLVPGIGEIIGGSAREERLDRLSARIREQGLPL----EAYGWYLDT 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            + G  PH G   G +R++ML+ G  N+R+V  FP +
Sbjct: 424 RRFGTVPHVGFGLGFERVLMLVTGIGNIRDVMAFPRT 460


>gi|32267165|ref|NP_861197.1| lysyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|39932098|sp|Q7VFL0|SYK_HELHP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|32263218|gb|AAP78263.1| lysyl-tRNA synthetases [Helicobacter hepaticus ATCC 51449]
          Length = 518

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 60/305 (19%), Positives = 133/305 (43%), Gaps = 12/305 (3%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + G V  +R  G   F+ I+D  GI Q   + +    +I +       +   G +++ S
Sbjct: 64  SIVGRVRFIRLMGKACFIKIQDESGILQAYVSKN----DIGEDFLLIKKVLEVGDIINVS 119

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHK 140
                    TG++ +    ++IL+ +  +PLP          +R++ R++DL   + + +
Sbjct: 120 GYAFVTK--TGELSIHTLTLQILTKS-IVPLPEKFHGLNDIELRYRQRYVDLIVNNKVKE 176

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
               R++I++ +R     + F+E  TP+L +      AR F+          Y L  AP+
Sbjct: 177 TFKLRSQIVSCIRQFFEQKGFLEVETPMLHSIPGGANARPFITHHNALDVDRY-LRIAPE 235

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F++   FR+E       P EF  ++   ++   +D++   + +   
Sbjct: 236 LYLKRLIVGGFEAIFELNRNFRNEGMDHSHNP-EFSMIEFYWAYKTYEDLITLTQELFAF 294

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           +F++ +  +++ ++ L I +       G  +  ++   +  N+ ++       + SK L 
Sbjct: 295 LFKKLNLPHSLIHDELEIDFSQ-WHIIGYKEALIKIGGLDKNIIDNQDALLSFLMSKHLK 353

Query: 320 VNPGY 324
           V+   
Sbjct: 354 VDKSM 358



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +      + F     +K+  +     +      
Sbjct: 396 NDENPNVADRFELFIGGKEIANGFSELNDPIDQFERFKEQAKAKDAGDEEAQYMDEDYVW 455

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL  AK +++V LFP
Sbjct: 456 ALAHGMPPTAGEGIGIDRLVMLLSNAKTIKDVILFP 491


>gi|237743097|ref|ZP_04573578.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229433393|gb|EEO43605.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 461

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 70/390 (17%), Positives = 126/390 (32%), Gaps = 56/390 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
           G   +   + L GWV ++R      F+++ D       Q+V       F+    +     
Sbjct: 11  GEDYLNKEIELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSISST 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++               +E+ A KIEI   A+ L  P+  +R   E +R K   
Sbjct: 71  IKVKGTLVKSQGSG-------QDLEVKADKIEIFQKAD-LEYPLQNKRHTFEYLRTK-AH 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++       NF+   TPI+T S  EGA +    + ++   
Sbjct: 122 LRPRTNTFSAVFRVRSVLAYALHKFFQENNFVYVHTPIITGSDAEGAGEMFRVTTLDMNK 181

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       + F   +   P FR E   + R   E
Sbjct: 182 LPKKENGEVDFTKDFFGKSTNLTVSGQLNVETFCAAFRNVYTFGPTFRAEYSNTARHASE 241

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +    +   E +++ V +   +       F                   
Sbjct: 242 FWMVEPEIAFADLSANMELAEAMVKFVIKYVMDTCPEEMEFFNSFIEKGLFDKLNNVLNN 301

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              RI Y +AI      +     P+   +   +EH  +     F K     P +      
Sbjct: 302 EFGRITYTEAIEILEKSRKKFEFPVKWGIDLQSEHERYLAEEYFKK-----PVFVTDYPK 356

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                  +   D     A     PG+  I 
Sbjct: 357 EIKAFYMKLNEDGKTVRAMDLLAPGIGEII 386



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P     +E K        F M           D  +++A   DL+  G  EI
Sbjct: 347 KPVFVTDYP-----KEIK-------AFYMK-------LNEDGKTVRAM--DLLAPGIGEI 385

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    E++L+    +G++    E  +       + G  PH G   G +R++M L 
Sbjct: 386 IGGSQREDSYEILLKRMKELGLN----EEDYEFYLDLRRFGSFPHSGYGLGFERMMMYLT 441

Query: 552 GAKNVREVSLFPMSQN 567
           G +N+R+V  FP + N
Sbjct: 442 GMQNIRDVIPFPRTPN 457


>gi|256848392|ref|ZP_05553835.1| lysyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256714990|gb|EEU29968.1| lysyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 499

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 60/304 (19%), Positives = 118/304 (38%), Gaps = 22/304 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V ++G +   R  G   F D+ D  G  Q     D    E  +  +   +    G    
Sbjct: 61  EVTIAGRMIAKRGSGKASFADLLDRGGKIQFYVRQDVVGEETYQLFKDSDI----GDFWG 116

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
            + + I   +  G++ + A+K+  L+ A   PLP          + ++ R+LDL  +   
Sbjct: 117 ITGDVIKTRM--GELTIRARKMTFLTKALR-PLPDKYHGLQDPELVYRQRYLDLITNRDS 173

Query: 140 K-NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQA 197
                  T+II ++R  M + +F E  TPIL   +S   AR F+          Y +  A
Sbjct: 174 FERFQTWTKIIKAIRNYMDSNDFTEVETPILENVASGAEARPFITHHNALDIDMY-MRIA 232

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            +   + L+  G +R +++   FR+E         EF  ++   ++ + +D++   E + 
Sbjct: 233 TELRLKRLIVGGMERVYELGRIFRNEGMD-PHHNPEFDTMETYAAYFDFNDVMQETEGIF 291

Query: 258 RGVFEEFSNG---------NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           +   +  S+             S  F R+   DAI+++     D    + +    +    
Sbjct: 292 KTAAKVVSDDLKVNYQGTELDFSKPFERMHMVDAIKKF--TGVDFWPEMTVEEARKLADE 349

Query: 309 SEFR 312
           +  +
Sbjct: 350 NGVQ 353



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 12/156 (7%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYE---WNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +A E G+   + ++   I++  F+E    ++ E+ I    +P  +    +  L   D 
Sbjct: 344 RKLADENGVQYEDWWKVGHIINA-FFEDKVQDQLEQPIFIYGHPKEISP--LAHLNREDP 400

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++L   G E A+     +      Q F           + +         A +
Sbjct: 401 R--FTDRFELYILGNEYANAFTELNDPIDQRQRFEAEAKEHAEGNDEYQPIDEDFVEALE 458

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GMPP GG+  GIDR+VML+  AK++R+V LFP  +
Sbjct: 459 YGMPPTGGLGVGIDRLVMLMTDAKSIRDVLLFPTMR 494


>gi|53715300|ref|YP_101292.1| asparaginyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|59798505|sp|Q64P24|SYN_BACFR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|52218165|dbj|BAD50758.1| asparaginyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 467

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 59/295 (20%), Positives = 108/295 (36%), Gaps = 29/295 (9%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     +   D G+ V + GWV   R    + F+ + D   I  V    D A F
Sbjct: 1   MEKISRTKIVDLMKREDFGAMVNVKGWVRTRRGSKQVNFIALNDGSTINNVQVVVDLANF 60

Query: 60  --EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+ K + +   L ++G++         A       E+ A++IE+L   +        +
Sbjct: 61  DEEMLKQITTGACLSVNGVLTESVGAGQKA-------EVQAREIEVLGTCDNTYPLQ--K 111

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           + +      +   L  R +T       R  +  ++      + F    TPI+TAS  EGA
Sbjct: 112 KGHSMEFLREIAHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGA 171

Query: 178 RDFLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
                 + +N                 F+    +     Q +  L A+     +   P F
Sbjct: 172 GQMFQVTTMNLYDLKKDENGSIVYDDDFFGKQASLTVSGQLEGELAATALGAIYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ E++F E  + ++  E  ++       +       FL
Sbjct: 232 RAENSNTPRHLAEFWMIEPEVAFNEIQENMDLAEEFIKYCVRWALDNCADDVKFL 286



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 4/87 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L     EI  G  R      ++     + I  + +           + G  PH G   G 
Sbjct: 384 LFPKIGEIIGGSERESDYNKLMMRIEEMHIPMKDMW----WYLDTRKFGTCPHSGFGLGF 439

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +R+++ + G  N+R+V  FP +    D
Sbjct: 440 ERLLLFVTGMSNIRDVIPFPRTPRNAD 466


>gi|260495699|ref|ZP_05815822.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260196764|gb|EEW94288.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 461

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 70/390 (17%), Positives = 125/390 (32%), Gaps = 56/390 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
           G   +   + L GWV ++R      F+++ D       Q+V       F+    +     
Sbjct: 11  GEDYLNKEIELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSISST 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++               +E+ A KIEI   A+ L  P+  +R   E +R K   
Sbjct: 71  IKVKGTLVKSQGSG-------QDLEVKADKIEIFQKAD-LEYPLQNKRHTFEYLRTK-AH 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++       NF+   TPI+T S  EGA +    + ++   
Sbjct: 122 LRPRTNTFSAVFRVRSVLAYALHKFFQENNFVYVHTPIITGSDAEGAGEMFRVTTLDMNK 181

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       + F   +   P FR E   + R   E
Sbjct: 182 LPKKENGEVDFTKDFFGKSTNLTVSGQLNVETFCAAFRNVYTFGPTFRAEYSNTARHASE 241

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +    +   E +++ V +   +       F                   
Sbjct: 242 FWMVEPEIAFADLSANMELAEAMVKFVIKYVMDTCPEEMEFFNSFIEKGLFDKLNNVLNN 301

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              RI Y +AI            P+   +   +EH  +     F K     P +      
Sbjct: 302 EFGRITYTEAIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYFKK-----PVFVTDYPK 356

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                  +   D     A     PG+  I 
Sbjct: 357 EIKAFYMKLNEDGKTVRAMDLLAPGIGEII 386



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P     +E K        F M           D  +++A   DL+  G  EI
Sbjct: 347 KPVFVTDYP-----KEIK-------AFYMK-------LNEDGKTVRAM--DLLAPGIGEI 385

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    E++L+    +G++    E  +       + G  PH G   G +R++M L 
Sbjct: 386 IGGSQREDSYEILLKRMKELGLN----EEDYEFYLDLRRFGSFPHSGYGLGFERMMMYLT 441

Query: 552 GAKNVREVSLFPMSQN 567
           G +N+R+V  FP + N
Sbjct: 442 GMQNIRDVIPFPRTPN 457


>gi|312371338|gb|EFR19556.1| hypothetical protein AND_22229 [Anopheles darlingi]
          Length = 1172

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 108/254 (42%), Gaps = 8/254 (3%)

Query: 22  RLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
            ++G VH +R   G +IF D+R      QV+AN     +E  +    E      G ++  
Sbjct: 698 SVAGRVHAIRESSGKLIFYDLRGEGLKLQVMANAKQ--YESEELFMEETAKIRRGDIIGV 755

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLH 139
           +   +      G++ +  ++I++L+      LP        +  RF+ R+LDL   + + 
Sbjct: 756 TG--VPGKTKKGELSVMPKRIKLLAPCL-HMLPHLHYGLKDKETRFRQRYLDLMLNNNVR 812

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
              + R++II+ +R       F+E  TP++   +        +    +      L  AP+
Sbjct: 813 DIFIVRSKIISYVRRFFDQLGFLEVETPMMNMIAGGATAKPFITHHNDLNMDLFLRIAPE 872

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y ++L   G DR ++I   FR+E       P EF   +  M++ + +DI+   + +L G
Sbjct: 873 LYLKMLTVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYNDIIEITQKLLSG 931

Query: 260 VFEEFSNGNTVSNN 273
           +         +  +
Sbjct: 932 MVYAIHGSYKIKYH 945



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 5/113 (4%)

Query: 475  LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
            L+    +++L     E+ +     +   V  + F      K   ++           A +
Sbjct: 1050 LTGITERFELFVMKKEVCNAYTELNDPAVQRERFEQQAADKAAGDDEAQLVDENFCTALE 1109

Query: 531  CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
             G+PP GG   GIDR  M L    N++EV LFP  +         P   + +Q
Sbjct: 1110 YGLPPTGGWGMGIDRFTMFLTDCNNIKEVLLFPAMKPEEQNRTQ-PGHSNEQQ 1161


>gi|224536085|ref|ZP_03676624.1| hypothetical protein BACCELL_00950 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522304|gb|EEF91409.1| hypothetical protein BACCELL_00950 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 580

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 57/291 (19%), Positives = 118/291 (40%), Gaps = 10/291 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +         V ++G +   R  G   F++++D  G  QV    D  C   
Sbjct: 40  NAFSTDIKAEFKDDAEPRKVSVAGRMMTRRVMGKASFIELQDSKGRIQVYITRDDICPGE 99

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + AQK+ +L+ + +    V  +    
Sbjct: 100 DKDLYNTVFKRLLDLGDFIGIEGFVFRTQMGEISIHAQKLTVLAKSIKPLPIVKYKDGVA 159

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                   +R++ R++DL  +  + +  +KR  +I +MR  +    + E  TPIL + + 
Sbjct: 160 YDSFEDPELRYRQRYVDLVVNDGVKETFLKRATVIKTMRAVLDEAGYTEVETPILQSIAG 219

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+  GF+  ++I   FR+E    +  P E
Sbjct: 220 GASARPFITHHNSLNMDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-E 277

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           F  +++ + + + + +++  E +L  +    +     + +   I +    R
Sbjct: 278 FTCMELYVQYKDYNWMMSFTEKLLERICIAVNGSEETTIDGKTISFKAPYR 328



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 83/248 (33%), Gaps = 40/248 (16%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W  S  +  L  I   ++ S      G             I   +  + G D       +
Sbjct: 292 WMMSFTEKLLERICIAVNGSEETTIDGKTISFKAPYRRLPILDAIKEKTGYDLNGKSEEE 351

Query: 406 PLKFCSFAADARNHIAQELG---IINCNCFEFC--------WIMDFPFYEWNEEEKKIDF 454
             + C    + +  I   +G   +I+    EFC        +I D+P             
Sbjct: 352 IRQVCK---ELKMEIDDTMGKGKLIDEIFGEFCEGTFIQPTFITDYP------------V 396

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             +P T        L           +++L+ NG E+A+     +      + F +    
Sbjct: 397 EMSPLTKMHRSKPGL---------TERFELMVNGKELANAYSELNDPIDQEERFKDQLRL 447

Query: 515 KEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            E  ++          RA Q GMPP  GI  GIDR+ ML+ G   ++EV  FP  +    
Sbjct: 448 SEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLTMLMTGKSYIQEVLFFPQMRPEKI 507

Query: 571 LLMGSPST 578
               +P+ 
Sbjct: 508 TPKDAPAK 515


>gi|86135226|ref|ZP_01053808.1| asparaginyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85822089|gb|EAQ43236.1| asparaginyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 477

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 54/283 (19%), Positives = 108/283 (38%), Gaps = 30/283 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEW 69
           L  S +   V + GWV   R +    F+ + D   I   Q V + ++   E  K + +  
Sbjct: 10  LESSTILQEVHVKGWVRTFRSNR---FIALNDGSTIKNIQCVIDFENTAEETLKRITTGA 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + I G ++              ++E+    IEIL  +     P+  ++   E +R +  
Sbjct: 67  AIAIKGTIVESQGRG-------QRVEIQVADIEILGDSNPDEYPIQPKKHSFEFLR-ENA 118

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L +R +T    +  R+++  ++        F   +TPI+T S  EGA +    +     
Sbjct: 119 HLRMRTNTFSAVMRVRSKLSFAVHKYFQENGFNYVNTPIITGSDAEGAGEMFRVTNFEDN 178

Query: 190 --------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                          F+          Q +    A    + +   P FR E+  + R   
Sbjct: 179 KAPVTEDGKIDYSKDFFGKETNLTVSGQLEAETFAMSLGKAYTFGPTFRAENSNTTRHLA 238

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           EF+ ++ E++F++ D  ++  E+ ++ V ++          FL
Sbjct: 239 EFWMIEPEVAFMDLDGNMDLAEDFIKSVLKDVLETCKDDLEFL 281



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 14/118 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M          +D  +++A   D++  G  EI  G  R    +V+++   
Sbjct: 369 DYPANIKAFYMR-------LNDDGKTVRAM--DVLFPGIGEIVGGSQREERFDVLVEKMK 419

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + I ++ +           + G   H G   G +R+V    G  N+R+V  FP +  
Sbjct: 420 TLDIEEKELW----WYLDLRKFGTAVHSGFGLGFERLVQFATGMGNIRDVIPFPRTPQ 473


>gi|314957544|gb|EFT01647.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
          Length = 1081

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 10/253 (3%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   D+   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDTMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686 HAVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +   ++ ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+   ++ 
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 245 EQDDILNTMENVL 257
           +   + +    ++
Sbjct: 858 DYVQMRHLTREMI 870


>gi|115742929|ref|XP_001201004.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115911567|ref|XP_793329.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 441

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 67/326 (20%), Positives = 125/326 (38%), Gaps = 26/326 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACF 59
           YR     +L    +   V +   +H  R  G   FL +R       G+  V         
Sbjct: 76  YR---VEELTADKIDQKVWIRARLHTSRSKGKQCFLVLRQQQFNCQGLLCVSDKVSKPMV 132

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER- 118
           + A ++  E ++ ++G++ +      +       +EL  ++I ++S AE        +  
Sbjct: 133 KFAANITKESIVDVEGVIAAVPQPIESCTQK--DVELHIEQIFVVSPAEPRLPLQIDDAA 190

Query: 119 -------------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
                           + +R   R LDLR  T          ++   R  M   +F+E  
Sbjct: 191 RAEGKDDDDSSLATVGQDVRLDNRVLDLRTTTNQAIFRLEAGVVQEFRAAMKKRDFVELQ 250

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
            P + +++ EG  +    S     ++ A  Q+PQ YKQ+ +A+ F+R F I   FR ED 
Sbjct: 251 IPKIISAASEGGANVFTVSYFKNNAYLA--QSPQLYKQMGIAADFERVFTIGAVFRAEDS 308

Query: 226 RSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            + R   EF  LDMEM+F     + L+ + +V   +F    +        +R  +     
Sbjct: 309 NTHRHLCEFVGLDMEMAFKYHYHEALDVIGSVFNDIFRGLRDNFQTEIQTVRRQFPSEDF 368

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSE 310
           ++      L  P  +  + +  +  +
Sbjct: 369 KFLDPPLRLEWPEGIKMLRDAGIEID 394


>gi|126699862|ref|YP_001088759.1| asparaginyl-tRNA synthetase [Clostridium difficile 630]
 gi|254975837|ref|ZP_05272309.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255093224|ref|ZP_05322702.1| asparaginyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255101388|ref|ZP_05330365.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255307262|ref|ZP_05351433.1| asparaginyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|255314966|ref|ZP_05356549.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255517641|ref|ZP_05385317.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255650751|ref|ZP_05397653.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260683837|ref|YP_003215122.1| asparaginyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260687497|ref|YP_003218631.1| asparaginyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306520662|ref|ZP_07407009.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|115251299|emb|CAJ69130.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS)
           [Clostridium difficile]
 gi|260210000|emb|CBA64029.1| asparaginyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260213514|emb|CBE05234.1| asparaginyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 465

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 130/376 (34%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +G  V+++GW+   R      F+++ D       Q+V +     F+    +     
Sbjct: 15  KEQYIGKTVKVAGWIRTSRVSKNFGFIELNDGSFFKNMQIVFDEKVENFKEVGKLAISSS 74

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G       E ++       +E+ A+ I +   ++    P+  +R   E +R     
Sbjct: 75  ILVEG-------ELVSTEGAKQPVEIHAKSIVVEGESDS-SYPLQKKRHTLEYLR-TIAH 125

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +T       R+    ++       NF+   +PI+T S  EGA +    + ++   
Sbjct: 126 LRPRSNTFSAVFRVRSIAAYAIHKFFQERNFVYAHSPIITGSDCEGAGEMFRITTMDLND 185

Query: 191 --------------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+   A      Q    +MA  F   +   P FR E+  + R   E
Sbjct: 186 IPKTEDGKIDYTQDFFGKEANLTVSGQLNAEIMALSFRNVYTFGPTFRAENSYTGRHASE 245

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E+ F + +D +   E++++ V             F                   
Sbjct: 246 FWMIEPEIVFADLEDNMELAEDMIKYVISYVLENAPEEMEFFNSFIDKGLLERLNKIVNS 305

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              RI Y  A+        +   P+       TEH  +   ++++  + V    +     
Sbjct: 306 EFIRITYTKAVELLIESGHEFEYPVEWGCDLQTEHERYITEQIYNCPVFVTDYPKDI--- 362

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  RMNE
Sbjct: 363 -------KAFYMRMNE 371



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 52/135 (38%), Gaps = 26/135 (19%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             ++ D+P        K I      F M           D  +++A   DL+  G  EI 
Sbjct: 352 PVFVTDYP--------KDIKA----FYMRMNE-------DGKTVRAM--DLLVPGVGEIV 390

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+L   + +G+     E  +       + G   H G   G +RI+M + G
Sbjct: 391 GGSQREEREDVLLDRINEMGLR----EEDYWWYLELRKFGTATHSGFGLGFERIIMYMTG 446

Query: 553 AKNVREVSLFPMSQN 567
             N+R+V  FP +  
Sbjct: 447 MSNIRDVIPFPRTPK 461


>gi|26338383|dbj|BAC32877.1| unnamed protein product [Mus musculus]
          Length = 477

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 67/303 (22%), Positives = 121/303 (39%), Gaps = 21/303 (6%)

Query: 12  LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           L V D  G  V + GW+  VR    ++FL + D   +  +    DS+       +     
Sbjct: 34  LRVQDARGECVTVQGWIRSVRSQKEVLFLHVNDGSSLESLQIVADSSFDST--ELTFGSS 91

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++   ++  N       +EL A+KIE++   E    P+  +  +P     +Y  
Sbjct: 92  VQVQGQLVKSQSKRQN-------VELKAEKIEVIGDCEAKAFPIKYKERHPLEYLRQYPH 144

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP------- 183
           L  R + L   +  R+    ++        F+   TP+LT++  EGA +           
Sbjct: 145 LRCRTNALGSILRVRSEATAAIHSYFKDNGFVHIHTPVLTSNDCEGAGELFQVEPSSKIK 204

Query: 184 -SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             + +     A      Q    +M+  F + F   P FR E+ +S R   EFY ++ E+S
Sbjct: 205 GPKESFFDVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEIS 264

Query: 243 FVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           FVE   D++  ME + +   E   +               A  + G  +  L+N  ++ +
Sbjct: 265 FVESLQDLMQVMEELFKATTEMVLSHCPEDVELC--HQFIAAGQKGRLEHMLKNNFLIIS 322

Query: 302 VTE 304
            TE
Sbjct: 323 YTE 325



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 25/137 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             +++++P                PF M +            +  A   DL+  G  E+ 
Sbjct: 363 PVFVINYP------------SELKPFYMRENED------GPQNTVA-AVDLLVPGVGELF 403

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G +R     V+ Q  +  G++K      +       + G  PHGG   G +R +  +LG
Sbjct: 404 GGSLREERYHVLEQRLARSGLTKA-----YQWYLDLRKFGSVPHGGFGMGFERYLQCILG 458

Query: 553 AKNVREVSLFPMSQNFC 569
             N+++V  FP   + C
Sbjct: 459 VDNIKDVIPFPRFTHSC 475


>gi|116494969|ref|YP_806703.1| aspartyl/asparaginyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|227535028|ref|ZP_03965077.1| aspartyl/asparaginyl-tRNA synthetase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|122263613|sp|Q038W1|SYN_LACC3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116105119|gb|ABJ70261.1| asparaginyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|227187343|gb|EEI67410.1| aspartyl/asparaginyl-tRNA synthetase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
          Length = 432

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 67/310 (21%), Positives = 116/310 (37%), Gaps = 32/310 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
              V   V++  W+   R  G I FL +RD           A+     F +AK +R E  
Sbjct: 11  KEHVNEEVKIGAWLTDKRSSGKITFLQLRDGSAYFQGVVSKADVPEEVFSLAKELRQESS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I G++   S             E+  + IE++  + + P      +E+       +R 
Sbjct: 71  MWITGVIHQDSRSHF-------GYEIEVRNIELVGDSHDYP---ISPKEHGIEFLLDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR          R  +I +       E FI+   PILT S+PEG  +       ++ +
Sbjct: 121 LWLRSKRQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEGTTELFETDYFDKKA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y     A  + + F   P FR E  ++ R   EF+ ++ EM+F  Q++ L
Sbjct: 181 Y--LSQSGQLY-AEAGAMAYGKVFTCGPVFRAEKSKTRRHLTEFWMIEPEMAFCHQEESL 237

Query: 251 NTMENVLRGVFEEFSNGNTVSNN----------------FLRICYDDAIRRYGTDKPDLR 294
              E  +  + +   +      +                + RI Y  AI+       D++
Sbjct: 238 KVQERYVAYLVQSVLDNCAYPLHLLDRDPEVLKQYTKLPYPRITYKQAIKMLQDAGMDVK 297

Query: 295 NPIIMHNVTE 304
                 +  E
Sbjct: 298 YGDDFGSPEE 307



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 19/135 (14%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTM--PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           D P +  N           PF M       +     D+L+ + +         EI  G  
Sbjct: 315 DQPVFVLN-----YPKTIKPFYMLTDPEDDQQYVCADMLAPEGYG--------EIIGGSE 361

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R    + +  A  + G+  +  E          + G  PH G   G++R +  +    ++
Sbjct: 362 RETDYDTLKNAIEHAGLDLDEYE----WYLDLRKYGSVPHSGFGLGLERAITWVCKLDHL 417

Query: 557 REVSLFPMSQNFCDL 571
           RE   FP   N    
Sbjct: 418 REAIPFPRMINRLKP 432


>gi|316970288|gb|EFV54261.1| aspartate--tRNA ligase [Trichinella spiralis]
          Length = 487

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 70/315 (22%), Positives = 119/315 (37%), Gaps = 20/315 (6%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDI-RDHYGITQVVANPDSACFEIAK---SVRS 67
           LG+   G  V + G +   R  G   F+ I   HY +   +    +   ++ K   SV  
Sbjct: 39  LGIDMEGKEVWVRGRLQTSRSKGKTCFVVIRHQHYTVQAALFVGRTVTTDMLKFVSSVSR 98

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE---------- 117
           E ++ I G V  R  E    +     IEL   +  ++S A         +          
Sbjct: 99  ESIVDIYGTV--RRVEQKITSCSQDSIELHVNRFWVVSSAVPRLPLQIEDAARGIVEGDP 156

Query: 118 -REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                   R   R LDLR  T       +  + +  R  + +  F+E  TP + +++ EG
Sbjct: 157 LSHVNLDTRLDNRVLDLRTVTSQAIFRLQAVVCDQFRKYLTSNGFVEIHTPKIISAASEG 216

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +    S   + ++ A  Q+PQ YKQ+ +A  F R F I   FR ED  + R   EF  
Sbjct: 217 GANVFEVSYFKRSAYLA--QSPQLYKQMAIAGDFGRVFTIGSVFRAEDSNTHRHLTEFIG 274

Query: 237 LDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           LD+EM+F     +++  +  +   +F+      +     +R  Y      +      L  
Sbjct: 275 LDLEMAFNFHYHEVVQLIGQMFIEMFKGLEKICSSEIAAVRKQYPAEPFEFTEPALILEY 334

Query: 296 PIIMHNVTEHFVHSE 310
              +  + EH  +  
Sbjct: 335 SQAIAILREHGENIG 349



 Score =  100 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 4/102 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
             N      +  YD+   G EI SG  R H  +++++   +  I  + +E        +F
Sbjct: 390 MPNPREKQYSNSYDMYMRGEEILSGAQRIHNPDLLIERAKHHNIDLKKIEA----YIDSF 445

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G PPH G   G++R+ ML LG  NVR  S+FP        
Sbjct: 446 RYGCPPHAGGGIGLERVTMLYLGLSNVRLASMFPRDPKRLTP 487


>gi|313682289|ref|YP_004060027.1| lysyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313155149|gb|ADR33827.1| lysyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 505

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 57/261 (21%), Positives = 106/261 (40%), Gaps = 7/261 (2%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +   R  G   F+ I D  G+ Q+    D+        V     L   G ++  S
Sbjct: 60  TVAGRIKLYRLMGKASFVKIEDESGMLQIYVARDNLPENFYNDVFK--KLIEVGDIIEVS 117

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
                     G++ L A K+ +L+ A   PLP        + +R++ R+LDL  +  + K
Sbjct: 118 GYPFITQH--GELSLHADKLTLLTKAIS-PLPEKFHGIQDKEMRYRQRYLDLIMNSEVRK 174

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
               R+++I+  R     + F+E  TP++   +        V      G    L  AP+ 
Sbjct: 175 TFHIRSKVISLTRRFFEDKGFLEVETPMMHPIAGGANAKPFVTHHNALGIDRYLRIAPEL 234

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF+  F+I   FR+E   +   P EF  ++   +F    D+++  +     +
Sbjct: 235 YLKRLIVGGFEAVFEINRNFRNEGMDATHNP-EFTSIEFYWAFKTYKDLISITKEYFEYL 293

Query: 261 FEEFSNGNTVSNNFLRICYDD 281
           F+       +    L + +D 
Sbjct: 294 FDHLDLPKRLPYGELEVDFDQ 314


>gi|281421746|ref|ZP_06252745.1| asparagine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281404241|gb|EFB34921.1| asparagine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 475

 Score =  180 bits (457), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 64/388 (16%), Positives = 126/388 (32%), Gaps = 41/388 (10%)

Query: 1   MHR-YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           M +  RT     L  +  GS V + GWV   R    + F+ + D   I  +    D +  
Sbjct: 1   MEKVKRTKVVDLLKSTAYGSIVNVKGWVRTHRSSKAVDFIALNDGSTINNIQIVVDPSKV 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +      ++      G  +S     + +      +E+  + IEI  +           + 
Sbjct: 61  DE-----NQLRQVTTGACISAVGTLVESQGAGQSVEIQCESIEIYGLCGSDYPMQKKGQ- 114

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                  +Y  L LR +T    +  R  +  ++        +   +TP++TAS  EGA  
Sbjct: 115 -SFEYMRQYAHLRLRTNTFGAVMRIRHNMAMAIHTYFHEHGYFYFNTPLITASDCEGAGQ 173

Query: 180 FLVPSRVNQ--------------GSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRD 222
               +  N                 F+    +     Q +  L A+     +   P FR 
Sbjct: 174 MFQVTTKNLYNLKKTEDGKIDYSDDFFGKQTSLTVSGQLEGELGATALGAIYTFGPTFRA 233

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           E+  + R   EF+ ++ E++F++ D ++   E+ ++               FL    D  
Sbjct: 234 ENSNTPRHLAEFWMVEPEVAFLDMDGLMELEEDFIKYCIRWALEHCKDDLAFLNKMIDKG 293

Query: 283 IR-----RYGTDKPDLRNPIIMHNVTEHFVHSEFRVF-----------SKILSVNPGYEV 326
           +         +D   L     +  + E   + +   F            +   V   ++ 
Sbjct: 294 LIARLEGVLNSDFVHLPYTEGIRILQEAIANGKKFEFPCEWGDDLASEHERFLVEEHFKR 353

Query: 327 WAIPAKGGGGNRAFCDRMNEWARSQGQP 354
             I        +AF  +++E     G  
Sbjct: 354 PVIMTNYPKAIKAFYMKIDEEESGFGGK 381



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 4/116 (3%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
              A   F M     ES  G            L     EI  G +R    + ++      
Sbjct: 360 YPKAIKAFYMKIDEEESGFGGKSGQTVQGTDVLFPQIGEIIGGSVREESYDKLMGEIEAR 419

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            I  + +           + G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 420 NIPMKDM----NWYLDTRKYGSCPHAGFGLGFERLILFVTGMQNIRDVIPFPRTPK 471


>gi|189463939|ref|ZP_03012724.1| hypothetical protein BACINT_00273 [Bacteroides intestinalis DSM
           17393]
 gi|189438512|gb|EDV07497.1| hypothetical protein BACINT_00273 [Bacteroides intestinalis DSM
           17393]
          Length = 580

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 57/291 (19%), Positives = 117/291 (40%), Gaps = 10/291 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + + T    +         V ++G +   R  G   F++++D  G  QV    D  C   
Sbjct: 40  NAFSTDIKAEFKDDAEPRKVSVAGRMMTRRVMGKASFVELQDSKGRIQVYITRDDICPGE 99

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY- 120
            K + +     +  L      E        G+I + AQK+ +L+ + +    V  +    
Sbjct: 100 DKELYNTVFKRLLDLGDFIGIEGFVFRTQMGEISIHAQKLTVLAKSIKPLPIVKYKDGVA 159

Query: 121 -----PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                   +R++ R++DL  +  +    +KR  +I +MR  +    + E  TPIL + + 
Sbjct: 160 YDSFEDPELRYRQRYVDLIVNDGVKDTFLKRATVIKTMRAVLDEAGYTEVETPILQSIAG 219

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  A + Y + L+  GF+  ++I   FR+E    +  P E
Sbjct: 220 GASARPFITHHNSLNIDLY-LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-E 277

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           F  +++ + + + + +++  E +L  +    +     + +   I +    R
Sbjct: 278 FTCMELYVQYKDYNWMMSFTEKLLERICIAVNGSEETTIDGKTISFKAPYR 328



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 55/283 (19%), Positives = 98/283 (34%), Gaps = 47/283 (16%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W  S  +  L  I   ++ S      G             I   +  + G D       +
Sbjct: 292 WMMSFTEKLLERICIAVNGSEETTIDGKTISFKAPYRRLPILDAIKEKTGYDLNGKSEEE 351

Query: 406 PLKFCSFAADARNHIAQELG---IINCNCFEFC--------WIMDFPFYEWNEEEKKIDF 454
             + C    + +  I   +G   +I+    EFC        +I D+P             
Sbjct: 352 IRQICK---ELKMEIDDTMGKGKLIDEIFGEFCEGTFIQPTFITDYP------------V 396

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             +P T        L           +++L+ NG E+A+     +      + F +    
Sbjct: 397 EMSPLTKMHRSKPGL---------TERFELMVNGKELANAYSELNDPIDQEERFKDQLRL 447

Query: 515 KEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            E  ++          RA Q GMPP  GI  GIDR+ ML+ G   ++EV  FP  +    
Sbjct: 448 SEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLTMLMTGKSYIQEVLFFPQMRPEKV 507

Query: 571 LLMGSPSTVSVEQLRELGLRIVENPKKILKISVTTILRNVYGL 613
           +   +P+        ELG+     P  +++ +    + ++ G+
Sbjct: 508 IPKDAPAK-----YMELGIAEDWVP--VIQKAGYNTIEDMKGV 543


>gi|290890625|ref|ZP_06553696.1| hypothetical protein AWRIB429_1086 [Oenococcus oeni AWRIB429]
 gi|290479753|gb|EFD88406.1| hypothetical protein AWRIB429_1086 [Oenococcus oeni AWRIB429]
          Length = 434

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 70/300 (23%), Positives = 124/300 (41%), Gaps = 16/300 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73
           VG  V++  W+ + R  G I FL +RD  G  Q V    + D A F++A+ ++ E    +
Sbjct: 16  VGQTVKIGVWLRQKRGSGKIAFLQLRDGTGFMQGVVSVGDVDEATFKLAEHLKQESSFYV 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   S             E++   IEI+  +E+ P+     +E+     F  R L L
Sbjct: 76  TGEIHQDSRSEF-------GFEMAVSDIEIVGESEDYPITP---KEHGTDFLFDERHLYL 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  II ++      + F++  +PI+T S+PEG  +       ++ ++  
Sbjct: 126 RHQKPFATMKIRDEIIRAIYDFFHKDGFLKLDSPIITDSAPEGTTELFPVKYFDKDAY-- 183

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y     A  F + +   P FR E   + R   EF+ +D EM+++ Q+D L   
Sbjct: 184 LSQTGQLY-AEAGAMAFGKVYDFGPTFRAEKSSTRRHLTEFWMIDAEMAWMHQEDSLKVQ 242

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           E  +  + E   +   V    L    +          P +     +  + ++    E+ V
Sbjct: 243 ERFIAYLIERVVDNCQVELKMLGQDVEKLRAYTKLPYPRISYDDTVKLLQDNDFKIEWGV 302



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 7/143 (4%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDL 484
           ++  N F+  W +DF   E     K+ +        P+      +K +          D+
Sbjct: 290 LLQDNDFKIEWGVDFGSPEETFLAKRFNSPFFIVNFPKAIKAFYMKRHPSRDDVVISADM 349

Query: 485 VCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           +      EI  G  R+   + + Q   +  +        +       + G  PH G   G
Sbjct: 350 LAPEGYGEIIGGSERDTDYDYLKQQIISQHLDLSE----YSWYLDLRKYGTVPHSGFGLG 405

Query: 543 IDRIVMLLLGAKNVREVSLFPMS 565
           ++R++  + G  ++RE   FP +
Sbjct: 406 LERLIRFIAGEDHIRETIPFPRT 428


>gi|163758949|ref|ZP_02166036.1| putative lysyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162284239|gb|EDQ34523.1| putative lysyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 498

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 64/333 (19%), Positives = 130/333 (39%), Gaps = 40/333 (12%)

Query: 2   HRYRTHSCGDLGVSDVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +L     G          V ++G V+  R  G  +F+DI D  G  Q+ ++
Sbjct: 36  HFHRTLTNEELSEKYEGIEPDTLTGDIVTVAGRVYSSRNSG--MFMDIHDASGKVQIFSH 93

Query: 54  PDSACF---EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
            D+      E+   +    ++ + G V              G++ ++A +I +L+ +  L
Sbjct: 94  KDTTPEAARELLPLIDLGDIIGVTGEVRRTKR---------GELTVNAHEITMLTKSL-L 143

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL 169
           P+P          +R++ R LD+  +   K    +R++I++ +R  M  + F+E  TP+L
Sbjct: 144 PMPEKWHGLSDIELRYRKRHLDILSNADSKVRFQQRSKIVSGIRRFMEDDGFMEIETPML 203

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSD 228
            +       +              L  AP+ Y +  + SG  D+ F++   FR+E   + 
Sbjct: 204 HSVYGGATAEPFKTHHNTLKLDMFLRIAPELYLKRALVSGLTDKVFEVNRNFRNEGVSTR 263

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  L+   ++ + +DI++ +E +   +                         YG 
Sbjct: 264 HNP-EFTMLECYWAYADYEDIMDLVERLFETLALTIHGKTD--------------FMYGE 308

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
            +   + P     + +    +    F  I +  
Sbjct: 309 TEFSFKGPFKRVPMPDAVKEATGIDFRAIDTDE 341



 Score = 94.7 bits (234), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 7/133 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMS 501
           +E   E   I  AH   T     +           +   +++  CN +E+ +     +  
Sbjct: 368 FEEKVEPTLIQPAH--VTHFPKDISPFAKEVPGEPRLVERFETYCNTWELGNAFSELNDP 425

Query: 502 EVMLQAFSNVGISKE---VVENRFGG-LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   +               + R       A   GMPP GG+  G+DR+VMLL  A ++R
Sbjct: 426 EEQRKRMVEQLEQAHARGETDKRLDDEFLDAIDQGMPPAGGLGIGVDRLVMLLTDAPSIR 485

Query: 558 EVSLFPMSQNFCD 570
           +V LFP  +   D
Sbjct: 486 DVILFPARKTRAD 498


>gi|73956986|ref|XP_850403.1| PREDICTED: similar to lysyl-tRNA synthetase isoform 3 [Canis
           familiaris]
 gi|73956998|ref|XP_861533.1| PREDICTED: similar to lysyl-tRNA synthetase isoform 8 [Canis
           familiaris]
          Length = 625

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 59/276 (21%), Positives = 116/276 (42%), Gaps = 15/276 (5%)

Query: 6   THSCGDLGVSDVGS-----FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           TH   + G    G       ++++G +H  R  G  +IF D+R      QV+AN  S  +
Sbjct: 134 THFIEEYGHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNY 191

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  +           G ++             G++ +   +I +LS      LP      
Sbjct: 192 KSEEEFIHINNKLRRGDIIGVKGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGL 248

Query: 120 YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
             +  R++ R+LDL  +   +   + R++II  +R  +    F+E  TP++        A
Sbjct: 249 KDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVA 308

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   
Sbjct: 309 KPFITYHNELDMNLY-MRIAPELYHKILVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTC 366

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +  M++ +  D++   E ++ G+ +  +    V+ +
Sbjct: 367 EFYMAYADYHDLMEITEKMISGMVKHITGSYKVTYH 402



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 507 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 566

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 567 YGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFPAMK 602


>gi|304439986|ref|ZP_07399879.1| asparagine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371478|gb|EFM25091.1| asparagine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 460

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 63/356 (17%), Positives = 125/356 (35%), Gaps = 50/356 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
             S +   V + GW+   R      F+++ D       Q+V   +   F+          
Sbjct: 11  DKSFIDKEVTVCGWIKTSRSSKNFGFIELNDGSSFKSLQIVLESNLENFDEVSKYTISSS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G V+               +EL A++++++ +++    P+  +R   E +R K   
Sbjct: 71  IEVTGKVVESPG-------AKQSVELHAKEVKLIGLSDRDY-PLQKKRHTMEYLRTK-TH 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-- 188
           L  R +T       R+ I  ++        F+   +PI+TAS  EGA +    + ++   
Sbjct: 122 LRPRTNTFKAVFKVRSLIAFAIHKYFQENGFVYVHSPIITASDAEGAGEMFQVTTLDLKD 181

Query: 189 -----------GSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q +    A  F   +   P FR E+  + R   EF
Sbjct: 182 IPMVDGKVDYNEDFFGRETHLTVSGQLEAEAFAHAFRDCYTFGPTFRAENSNTARHAAEF 241

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ E+SF + + +L  +E  ++ V             F                    
Sbjct: 242 WMVEPELSFCKLEGMLENVEGCIKYVINYVLENAPDEMEFFNQFIDKGLLDRLKSIVEKD 301

Query: 276 --RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
             ++ Y +A+      K D + P+   +   TEH  +    +F K + V    +  
Sbjct: 302 FGKVTYTEAVELLKESKADFKYPVEWGIDLQTEHERYLTEEIFKKPVFVTDYPKDI 357



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 26/140 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P        K I      F M           D  +++A   DL+  G  E+
Sbjct: 346 KPVFVTDYP--------KDIKA----FYMT-------LNEDNKTVRAS--DLLVPGIGEL 384

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R H  EV+      +G+  +  E          + G     G   G +R+VM + 
Sbjct: 385 VGGSQREHRPEVLENRMRELGLDVDAYE----WYLDLRRYGTVITSGYGIGFERLVMYIT 440

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G KN+R+V  FP + N  D+
Sbjct: 441 GMKNIRDVIPFPRTVNSADI 460


>gi|300778809|ref|ZP_07088667.1| lysine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300504319|gb|EFK35459.1| lysine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 565

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 61/339 (17%), Positives = 124/339 (36%), Gaps = 31/339 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS--EWVLCIDGL 76
             V+++G +   R  G   F +++D  G  QV  N D  C    K + +     L   G 
Sbjct: 47  KQVKIAGRLMSRRIQGKASFAELQDSKGKIQVYFNRDEICPGEDKELYNEVYKHLLDIGD 106

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-------GEREYPESIRFKYR 129
           ++    E     +  G+  +  +   +L+ A                +      +R++ R
Sbjct: 107 IIGIEGELFTTQV--GEKTVLVKNFTLLTKALRPLPQAKTDEYGVVHDGFTDPELRYRQR 164

Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           ++DL     + +  VKRT++ N+MR       + E  TPIL +      A+ F+      
Sbjct: 165 YVDLTVNPQVKEIFVKRTKLFNAMRTFFNDAGYFEVETPILQSIPGGAAAKPFITHHNAL 224

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ + +
Sbjct: 225 DIPLY-LRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKDYN 282

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
            +++  E +L     + +     +              +G  + D + P    ++TE  +
Sbjct: 283 WMMDFTEKLLEFCAIQVNGTTKAT--------------FGEHEVDFKAPYPRVSMTEAIL 328

Query: 308 HSEFRVFSKILSVN--PGYEVWAIPAKGGGGNRAFCDRM 344
                  +           +   I      G     D +
Sbjct: 329 KFTGFDITGKTEQELYDFAKSIGIEVNETMGKGKLIDEI 367



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 45/122 (36%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+  G EIA+     +      + F
Sbjct: 373 EGNFIQPTFITDYPIEMSPLTKKHRNKEGLTERFELMVCGKEIANAYSELNDPIDQRERF 432

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  E  ++          RA + GMPP  G+  G+DR++M L    +++EV  FP 
Sbjct: 433 EAQMALSERGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLIMFLTNNASIQEVLFFPQ 492

Query: 565 SQ 566
            +
Sbjct: 493 MR 494


>gi|225450809|ref|XP_002279658.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 597

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 60/333 (18%), Positives = 120/333 (36%), Gaps = 38/333 (11%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
            V L+G +   R     + F D+       QV+A+  S+  + A+  R    +    +V 
Sbjct: 104 TVSLAGRIMSKRSSSSKLFFYDLHGDGAKVQVMADARSSDMDEAEFSRFHSGVKRGDIV- 162

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVF----------GEREY-------- 120
                        G++ +  +   +LS    +                + +         
Sbjct: 163 --GVTGFPGKTKRGELSIFPKSFVVLSHCLHMMPRQKAGPGSDNANVKKTDVWVPGSTRN 220

Query: 121 -------PESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                   +  R++ R+LDL  +  + +    R +II+ +R  +   +F+E  TP++   
Sbjct: 221 PETYILKDQETRYRQRYLDLMLNMEVRQIFKTRAKIISYIRSFLDNLDFLEVETPMMNMI 280

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A    V    +      +  AP+ Y + L+  G DR ++I   FR+E       P 
Sbjct: 281 PGGAAARPFVTHHNDLNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP- 339

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF   +  M+F + +D++   E +L G+ +E + G  +  +   +  D         + D
Sbjct: 340 EFTTCEFYMAFADYNDVMELTEKMLSGMVKELTGGYKIKYHANGLDKD-------PIEID 392

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
              P    ++ E           K LS +   +
Sbjct: 393 FTPPFRRIDMIEDLEKMADLSIPKDLSSDEANK 425



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 9/108 (8%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L  N  E+ +     +   V  Q F+     ++  ++           A + G+
Sbjct: 486 LTERFELFVNKHELCNAYTELNDPVVQRQRFAEQLKDRQSGDDEAMALDETFCMALEYGL 545

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
           PP GG   GIDR+ M+L  ++N++EV LFP  +         PS+V  
Sbjct: 546 PPTGGWGLGIDRLTMMLTDSQNIKEVLLFPAMKP-----QDEPSSVQP 588


>gi|229815818|ref|ZP_04446142.1| hypothetical protein COLINT_02867 [Collinsella intestinalis DSM
           13280]
 gi|229808513|gb|EEP44291.1| hypothetical protein COLINT_02867 [Collinsella intestinalis DSM
           13280]
          Length = 467

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 93/275 (33%), Gaps = 23/275 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++GWV  VR      F+ + D      +    +         +  + V       
Sbjct: 18  GQQVTVAGWVKSVRDMKNFGFVTLNDGSCFKDLQVVMNREALANYDEIAHQNVSAA---- 73

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +  + E           EL+A +I +  V+         ++          + L  R + 
Sbjct: 74  LICTGELKLTPDAPQPFELAATEIAVEGVSAPDYPLQ--KKRATVEFLRTQQHLRPRTNL 131

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--------- 188
                  R+    ++        F+  +TPI+TAS  EGA +    + ++          
Sbjct: 132 FRAVFRVRSVAAAAIHRFFQDRGFVYVNTPIITASDCEGAGEMFHVTTIDPANPPLDDKG 191

Query: 189 -----GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+   A      Q      A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 192 NVDFSQDFFGTTASLTVSGQLNAENFAMAFGDVYTFGPTFRAENSNTTRHAAEFWMIEPE 251

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           ++F +  D ++  E++L+ V  +  +        L
Sbjct: 252 IAFADLADDMDLAEDMLKYVIRDVMDRCPDELAML 286



 Score = 84.0 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 51/149 (34%), Gaps = 24/149 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +     ++ D+P                 F M        + ND     A  
Sbjct: 342 HERFLTEEHFKCPTFVTDYP------------AEIKAFYM--------RLNDDGKTVAAA 381

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    EV+ +  + +G+       ++       + G   H G   
Sbjct: 382 DCLVPGIGEIIGGSQREERLEVLERRIAELGMDP----EQYKYYLDLRRYGTCKHAGFGL 437

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G +R+VM L G  N+R+V   P +   CD
Sbjct: 438 GFERLVMYLTGVGNIRDVLPHPRTVGSCD 466


>gi|59798580|sp|Q7UHE1|SYN_RHOBA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|32448516|emb|CAD78031.1| asparaginyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 490

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 62/314 (19%), Positives = 118/314 (37%), Gaps = 29/314 (9%)

Query: 21  VRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSEWVLCIDGL 76
           V + GW+   R   GG  FL++ D   +  +     +      E  + + +   + + G 
Sbjct: 47  VEIRGWIRTRRDSKGGFSFLEVNDGTSLGNLQVVAPAELENYAEEIQKLTAGCSVVVQGE 106

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++   A+  +        EL A  + ++   +    P+  +R   E +R ++  L  R +
Sbjct: 107 LVESPAKGQST-------ELHASSVRVIGWCDGETYPLQKKRHSFEKLR-EWSHLRARTN 158

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------- 189
           TL   +  R RI  S+      E F    TPI+TAS  EGA +    + +N         
Sbjct: 159 TLGAVMRVRNRISQSIHRFFDDEGFNYLHTPIITASDCEGAGEMFRVTTLNLEKLAGSNR 218

Query: 190 ------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+  P       Q +    A+   R +   P FR E+  + R   EF+ ++ E
Sbjct: 219 PFDTKQDFFQKPTHLTVSGQLEAETYATALSRVYTFGPTFRAENSNTSRHLAEFWMVEPE 278

Query: 241 MSFVEQDDILNTMENVLRGVFEE-FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            +F + +D +   E  L+ VF +  S+     + F        I +  +        +  
Sbjct: 279 AAFYDLNDNMQLAERFLKRVFSDCLSHCGEDMDFFNERIEKGKIDQLKSVIEKPFEHMTY 338

Query: 300 HNVTEHFVHSEFRV 313
            +  E  +  + + 
Sbjct: 339 TDAVERLLACDEKF 352



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 12/116 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
               +  PF M        + +D     A    LV    EI  G  R    +V+ +  + 
Sbjct: 382 DYPSSIKPFYM--------RVSDDGKTVAAMDVLVPGVGEIIGGSQREERLDVLQRRMAE 433

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+     E+ +       + G  PH G   G++R V  + G  N+R+V  FP + 
Sbjct: 434 GGLD----ESEYWWYVDLRRYGTVPHAGFGLGLERAVQYVTGMANIRDVIPFPRTP 485


>gi|284928615|ref|YP_003421137.1| asparaginyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809074|gb|ADB94779.1| asparaginyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 463

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 70/382 (18%), Positives = 124/382 (32%), Gaps = 56/382 (14%)

Query: 6   THSCGDL-GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           T    DL     +   + + GWV   R      F+++ D   +  +    D    +   +
Sbjct: 3   TKRIKDLFRNGVIEENILIQGWVRTKRELKDFTFIEVNDGSSLKNLQVILD----KTISN 58

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
                +L   G  +  S   + +      +EL A  +++   +     P+  +R   E +
Sbjct: 59  YEETLMLLNTGSSLEVSGILVTSPGKNQSLELKANTVKVYGNSNPETYPLQKKRHSFEFL 118

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R     L  R +TL   I  R     ++      + F+  +TPI+T +  EGA D    +
Sbjct: 119 R-TIGHLRHRTNTLGAVIRIRNSCTMAIHNFFQEKGFLLINTPIITVNDCEGAGDLFKIT 177

Query: 185 RVNQ--------------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
             +                 F+   A      Q +  +MA  F   +   P FR E+  +
Sbjct: 178 NFDLCNIPKDKRGNVEYNQDFFGKPAYLTVSGQLEAEVMAMTFQNVYTFGPTFRAENSNT 237

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------- 271
            R   EF+ ++ EM+F + +   +  E  L+ VF+                         
Sbjct: 238 SRHLAEFWMVEPEMAFCDLEGNQDVAEEFLKYVFKNVLKNCPEDMEFFNKYIDKTVLETA 297

Query: 272 -----NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGY 324
                  F RI Y +AI                 +   +EH  +    VF          
Sbjct: 298 EKIINKKFERITYTNAINLLENSNKQFNYKAEWGIDLQSEHERYLAEEVFKSP------- 350

Query: 325 EVWAIPAKGGGGNRAFCDRMNE 346
               I        +AF  R+N+
Sbjct: 351 ---VIVTDYPATTKAFYMRLND 369



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 40/134 (29%), Gaps = 24/134 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
               + D+P                 F M        + ND     A    L     EI 
Sbjct: 349 SPVIVTDYP------------ATTKAFYM--------RLNDDRQTVAAMDILFPKIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R     V+ +      I    +           + G  PH G   G +R+V  + G
Sbjct: 389 GGSQREERLNVLEERLEEQNI----ITEDLSWYLDLRRYGTVPHSGFGLGFERMVQFMTG 444

Query: 553 AKNVREVSLFPMSQ 566
            KN+RE   FP + 
Sbjct: 445 IKNIREAIPFPRAP 458


>gi|167756625|ref|ZP_02428752.1| hypothetical protein CLORAM_02162 [Clostridium ramosum DSM 1402]
 gi|237733914|ref|ZP_04564395.1| asparaginyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|167702800|gb|EDS17379.1| hypothetical protein CLORAM_02162 [Clostridium ramosum DSM 1402]
 gi|229382995|gb|EEO33086.1| asparaginyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 476

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 58/362 (16%), Positives = 132/362 (36%), Gaps = 45/362 (12%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHY---GITQVVANPDSACFEIAKSVRSEWVLCIDG 75
            +V L GWV   R +G + F+ + D      +  V    + + +E    + +   + + G
Sbjct: 41  EYVELEGWVRTNRNNGKLGFIALNDGTYFKNLQVVYTEAEISNYEEIDKLSTGSSIRVVG 100

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            +                 E+ A +IEI    +E       ++ +      +   L  R 
Sbjct: 101 KLKLTPEGKQP-------FEVEATEIEIEGKCDEDFPLQ--KKRHSFEYMREIPHLRPRA 151

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----QGSF 191
           +T +     R+ +  ++     ++ F+   TPI+T +  EGA +    + ++    +  F
Sbjct: 152 NTFYAIFRLRSVLSMAIHEFFQSQGFVYVHTPIITGNDGEGAGEMFRATTIDGTNFEDDF 211

Query: 192 Y---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           +   A      Q      A  F   +   P FR E+  + R   EF+ ++ E++F + +D
Sbjct: 212 FEKEAFLTVTGQLHVEAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMIEPEIAFADLED 271

Query: 249 ILNTMENVLRGVFEEFSNG---------------------NTVSNNFLRICYDDAIRRYG 287
            ++ +E++++   +   +                         +++F R+ Y +AI    
Sbjct: 272 DMDLIEDMVKYCIDYVLDNAPAEMEFFASMIDKDCINRITKVKNSDFKRMTYTEAIEILE 331

Query: 288 TDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKIL---SVNPGYEVWAIPAKGGGGNRAFCD 342
                 +N +    ++ +EH  +   +V    +         + + +         A CD
Sbjct: 332 KADVKFKNKVSWGMDLNSEHERYICEQVVKGPVFLTDYPKEIKAFYMRLNDDNKTVAACD 391

Query: 343 RM 344
            +
Sbjct: 392 LL 393



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   DL+  G  E+  G  R    +V+ +     G+SK    +         +
Sbjct: 381 NDDNKTVA-ACDLLVPGIGELVGGSQREERYDVLERIMDEKGMSK----DGLQWYMDLRR 435

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   H G   G DR +M L G +N+R+V  FP +  
Sbjct: 436 YGGCKHAGFGLGFDRFLMYLTGMQNIRDVEPFPRTPR 472


>gi|114673283|ref|XP_001138861.1| PREDICTED: asparaginyl-tRNA synthetase isoform 1 [Pan troglodytes]
          Length = 518

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 70/344 (20%), Positives = 126/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V   +         + +E  + + G+
Sbjct: 95  GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGM 154

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 155 LNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 210

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ +    R       + E + P L  +  EG           + +F  L Q
Sbjct: 211 NMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 268

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  DD+LN +E++
Sbjct: 269 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLEDL 327

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 328 VCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAIVWLKEHDVKKEDG-TFYEFG 386

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 387 EDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDSRLTE 430



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +S     +         L+ N  EI  G +R   SE +L  +  
Sbjct: 409 RFPVEIKSFYMQRCPEDSRLTESVDV-------LMPNVGEIVGGSMRIFNSEEILAGYKR 461

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 462 EGIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCT 517

Query: 571 L 571
            
Sbjct: 518 P 518


>gi|269121090|ref|YP_003309267.1| asparaginyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268614968|gb|ACZ09336.1| asparaginyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 462

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 71/432 (16%), Positives = 146/432 (33%), Gaps = 68/432 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   + L+GW+ + R      FL++ D       QVV +   + F+    +     
Sbjct: 12  HAELLNKELELNGWIRKRRDQKNFGFLEVNDGTFFNGIQVVFDDSLSNFDEISRLSISSS 71

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G+++    +           E+ A++I I + A+ L  P+  +R   E +R     
Sbjct: 72  VHVKGVLVQSEGKGQT-------FEIKAKEITIYNKAD-LDYPLQNKRHTLEYLR-TIAH 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--- 187
           L  R +T       R+ +  ++        F+   TPI+T S  EGA +    + ++   
Sbjct: 123 LRPRTNTFMAVFRVRSLMSYAIHKFFNERGFVYVHTPIITGSDTEGAGEMFQLTTLDLKD 182

Query: 188 -----------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                      +  F+   A      Q         F   +   P FR E   + +   E
Sbjct: 183 IPKNDKGEVEYKDDFFGKQANLTVSGQLNVETFCMAFKNTYTFGPTFRAEKSNTPKHVSE 242

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F + D  ++  E++++ +             F                   
Sbjct: 243 FWMMEPEIAFADLDVNMDIAEDMMKYIIRYVLENAPEEMQFFNQFIDKTLLDRLNGLVNS 302

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+   +   TEH  +     F K + V    +     
Sbjct: 303 EFGRVTYTEAIEILKKADKKFEYPVEWGIDLQTEHERYLAEEHFKKPVFVTDYPKDI--- 359

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR 390
                  +AF  ++NE  ++     L          G    +G   +  N    E     
Sbjct: 360 -------KAFYMKLNEDGKTVRAMDLL-------APGIGEIIGGSQREDNFEKLEQRIKD 405

Query: 391 LDMQDGDSCFFI 402
           +++ + D  +++
Sbjct: 406 MNLNEKDYWWYM 417



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 54/148 (36%), Gaps = 26/148 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P        K I      F M           D  +++A  
Sbjct: 337 HERYLAEEHFKKPVFVTDYP--------KDIKA----FYMK-------LNEDGKTVRAM- 376

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  EI  G  R    E + Q   ++ ++++             + G  PH G  
Sbjct: 377 -DLLAPGIGEIIGGSQREDNFEKLEQRIKDMNLNEKDYW----WYMELRKYGSVPHSGYG 431

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G +R +M + G  N+R+V  FP     
Sbjct: 432 LGFERAIMYVTGMLNIRDVIPFPRGPKS 459


>gi|283784757|ref|YP_003364622.1| asparaginyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282948211|emb|CBG87778.1| asparaginyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 466

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 69/386 (17%), Positives = 122/386 (31%), Gaps = 50/386 (12%)

Query: 16  DVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           DV S V + GWV   R    GI FL + D      V A  +++     + V    +    
Sbjct: 15  DVDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEEV----LRLTT 70

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G  +  + + + +       E+ A  +E+    E+        + +      +   L  R
Sbjct: 71  GCSVIVTGKVVASPGQGQSFEIQATHVEVSGWVEDPDTYPMAAKRHSIEYLREVAHLRPR 130

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN------- 187
            + +      R  +  ++      + F   STP++TAS  EGA +    S ++       
Sbjct: 131 TNMIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRN 190

Query: 188 -------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A    + +   P FR E+  + R   EF+ L
Sbjct: 191 EQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWML 250

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F   +DI    E +L+  F            F                      +
Sbjct: 251 EPEVAFANLNDIAALAEAMLKYAFNAVLTERADDMKFFAERVDKEAISRLERFIAADFAQ 310

Query: 277 ICYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           + Y DA+           NP+    ++ +EH  +     F   + V    +         
Sbjct: 311 VDYTDAVTILENCGKTFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KA 365

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIF 360
              R   D     A     PG+  I 
Sbjct: 366 FYMRLNNDGKTVAAMDVLAPGIGEII 391



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
             ND  ++ A   D++  G  EI  G  R    +V+      +G++K      +      
Sbjct: 370 LNNDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMLEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|328712346|ref|XP_003244783.1| PREDICTED: lysyl-tRNA synthetase-like isoform 2 [Acyrthosiphon
           pisum]
          Length = 579

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 110/258 (42%), Gaps = 8/258 (3%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
                ++G VH +R  G  +IF D+R      QV+AN      E  +S  S+      G 
Sbjct: 107 DEKYSVAGRVHAIRESGPKLIFYDLRGEGVKIQVMANAKQYTTE--ESFLSDTSKIRRGD 164

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-R 135
           ++  +          G++ +  Q I++L+      LP        +  R++ R+LDL   
Sbjct: 165 IIGVTGSP--GKTKKGELSIFPQNIKLLTPCL-HMLPHMHYGLKDKETRYRQRYLDLIIN 221

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +    + R ++I+ +R  +    F+E  TP++   +        +    +      + 
Sbjct: 222 EHVRNKFIVRAKVISYVRRFLDNLGFLEIETPMMNMIAGGATAKPFITHHNDLNMDLFMR 281

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++   E+
Sbjct: 282 VAPELYHKMLVVGGIDRVYEIGRQFRNEAIDLTHNP-EFTTCEFYMAYADYNDLMQITED 340

Query: 256 VLRGVFEEFSNGNTVSNN 273
           +L G+ +       +  +
Sbjct: 341 LLSGLVKSIYGTYKIKYH 358


>gi|256080758|ref|XP_002576644.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238661921|emb|CAZ32881.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 526

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 85/375 (22%), Positives = 148/375 (39%), Gaps = 45/375 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVVANPDSACFE---IAKSVRSE 68
             S++   V + G +HR R  G + F  +R   Y I  V++  +    E      S+  E
Sbjct: 79  NESNINQNVWVRGRLHRSRMKGKLCFFILRLQDYRIQNVLSVGEQTPKEMLAFVSSISKE 138

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--------EELPLPVFGERE- 119
            ++ + G V+         N  T  IE+  +K+ ++S A        E+   P   E   
Sbjct: 139 SIIDVFGRVLKSPVLIEGCNPDT--IEIHCEKVFVVSAALPTLPLQIEDAMRPDDDETTL 196

Query: 120 --YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               +  R   R +DLR             ++      +    F+   TP + +++ EG 
Sbjct: 197 SRVNQDTRLDNRCIDLRTPVNQAIYRIEAGVVKFFMEYLTNAGFVNIHTPKMISAASEGG 256

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +    S  +  ++ A  Q+PQ YKQ+ +A+ F+R F I   FR ED  + R   EF  L
Sbjct: 257 ANVFRVSYFSGSAYLA--QSPQLYKQMAIAADFERVFTIGSVFRAEDSNTHRHLTEFVGL 314

Query: 238 DMEMSFVEQ-DDILNTMENVLRGVFE----------EFSNGNTVSNNF------LRICYD 280
           D+EM+F     ++++ + ++   +F+          +       S  F      LR+ Y 
Sbjct: 315 DIEMAFKNHYHEVVDLIADMFVHMFKGLQREYQTEIQIICQQYHSEPFEFLQPTLRLQYR 374

Query: 281 DAIRRYGT------DKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVWAIPA 331
           DAIR          +  DL  P    +  + +   H++F +  K  L +   Y +     
Sbjct: 375 DAIRMLQDAGWEIGELDDLNTPAEKFLGKLIKEKYHTDFYILDKFPLDIRAFYTMPHPTD 434

Query: 332 KGGGGNRAFCDRMNE 346
           KG   +  F  R  E
Sbjct: 435 KGYSNSYDFFMRGEE 449



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 71/199 (35%), Gaps = 27/199 (13%)

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-IINCNCFE 433
           + +  +    E ++  L +Q  D+   +     +      D      + LG +I      
Sbjct: 353 ICQQYHSEPFEFLQPTLRLQYRDAIRMLQDAGWEIGE-LDDLNTPAEKFLGKLIKEKYHT 411

Query: 434 FCWIMD-FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
             +I+D FP      + +      +P                    +  YD    G EI 
Sbjct: 412 DFYILDKFPL-----DIRAFYTMPHPT---------------DKGYSNSYDFFMRGEEIM 451

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H   ++ +  ++  +       +      AF+ G PPH G   G++R+ ML LG
Sbjct: 452 SGAQRIHDPVLLSERATHHKVDL----EKIKAYIDAFRYGCPPHAGGGIGLERVTMLFLG 507

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+ S+FP        
Sbjct: 508 LDNIRKTSMFPRDPKRLTP 526


>gi|164686176|ref|ZP_02210206.1| hypothetical protein CLOBAR_02614 [Clostridium bartlettii DSM
           16795]
 gi|164601778|gb|EDQ95243.1| hypothetical protein CLOBAR_02614 [Clostridium bartlettii DSM
           16795]
          Length = 465

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 131/376 (34%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   V+++GW+   R      F+++ D       Q+V +     F+    +     
Sbjct: 15  KEQYIDKTVKVAGWIRTSRMSKNFGFIELNDGSFFKNMQIVIDEKLENFKEIGKLPISTS 74

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L I+G +++    T NA      +E+ A KI +   ++    P+  +R   E +R     
Sbjct: 75  LLIEGTLVA----TQNAKQP---VEIQATKIVVEGESD-NSYPLQKKRHTVEYLR-TIAH 125

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +        R+    ++       NF+   +PI+T S  EGA +    + ++   
Sbjct: 126 LRPRSNLFSAAFRVRSVAAYAIHKFFQDRNFVYAHSPIITGSDCEGAGEMFRLTTLDLND 185

Query: 191 --------------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+   A      Q    +MA  F   +   P FR E+  + R   E
Sbjct: 186 VPKTEDGKVDYSQDFFGKEANLTVSGQLNAEIMALAFRNVYTFGPTFRAENSYTGRHASE 245

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F + +D +   E++++ +             F                   
Sbjct: 246 FWMIEPEIAFADLEDNMELAEDMIKYIINYVLENCPEEMEFFNSFVDKGLLERLHKIVNS 305

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              RI Y  AI            P+       TEH  +   ++F+  + V    +     
Sbjct: 306 EFIRITYTKAIELLLESGQKFEYPVEWGCDLQTEHERYITEQIFNAPVFVTDYPKEI--- 362

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  RMNE
Sbjct: 363 -------KAFYMRMNE 371



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              ++ D+P     +E K        F M           D  +++A   DL+  G  EI
Sbjct: 351 APVFVTDYP-----KEIK-------AFYMRMNE-------DGKTVRAM--DLLVPGVGEI 389

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    ++++      G++    E  +       + G   H G   G +RI+M L 
Sbjct: 390 IGGSQREERYDLLMDRIKECGLN----EEDYWWYLELRKYGTATHSGFGLGFERIIMYLT 445

Query: 552 GAKNVREVSLFPMSQN 567
           G  N+R+V  FP +  
Sbjct: 446 GISNIRDVIPFPRTPK 461


>gi|161579024|ref|NP_870953.2| asparaginyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 462

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 62/314 (19%), Positives = 118/314 (37%), Gaps = 29/314 (9%)

Query: 21  VRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSEWVLCIDGL 76
           V + GW+   R   GG  FL++ D   +  +     +      E  + + +   + + G 
Sbjct: 19  VEIRGWIRTRRDSKGGFSFLEVNDGTSLGNLQVVAPAELENYAEEIQKLTAGCSVVVQGE 78

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++   A+  +        EL A  + ++   +    P+  +R   E +R ++  L  R +
Sbjct: 79  LVESPAKGQST-------ELHASSVRVIGWCDGETYPLQKKRHSFEKLR-EWSHLRARTN 130

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------- 189
           TL   +  R RI  S+      E F    TPI+TAS  EGA +    + +N         
Sbjct: 131 TLGAVMRVRNRISQSIHRFFDDEGFNYLHTPIITASDCEGAGEMFRVTTLNLEKLAGSNR 190

Query: 190 ------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+  P       Q +    A+   R +   P FR E+  + R   EF+ ++ E
Sbjct: 191 PFDTKQDFFQKPTHLTVSGQLEAETYATALSRVYTFGPTFRAENSNTSRHLAEFWMVEPE 250

Query: 241 MSFVEQDDILNTMENVLRGVFEE-FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            +F + +D +   E  L+ VF +  S+     + F        I +  +        +  
Sbjct: 251 AAFYDLNDNMQLAERFLKRVFSDCLSHCGEDMDFFNERIEKGKIDQLKSVIEKPFEHMTY 310

Query: 300 HNVTEHFVHSEFRV 313
            +  E  +  + + 
Sbjct: 311 TDAVERLLACDEKF 324



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 12/116 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
               +  PF M        + +D     A    LV    EI  G  R    +V+ +  + 
Sbjct: 354 DYPSSIKPFYM--------RVSDDGKTVAAMDVLVPGVGEIIGGSQREERLDVLQRRMAE 405

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+     E+ +       + G  PH G   G++R V  + G  N+R+V  FP + 
Sbjct: 406 GGLD----ESEYWWYVDLRRYGTVPHAGFGLGLERAVQYVTGMANIRDVIPFPRTP 457


>gi|331087243|ref|ZP_08336313.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330408929|gb|EGG88390.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 463

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 67/357 (18%), Positives = 124/357 (34%), Gaps = 51/357 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
             + + + V + GWV  +R      F+ + D       QVV +     F     +     
Sbjct: 13  REAYLDNQVTVGGWVRSIRDSKTFGFIVVNDGSFFETLQVVYHDSMDNFAEISKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A+++ I+  A     P+  +R   E +R     
Sbjct: 73  IIVKGTLVATPQ-------AKQPFEIQAEEV-IIEGASAPDYPLQKKRHSFEYLR-TISH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ I  ++        F+   TP++T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSLIAYAIHQFFQERGFVYVHTPLITGSDCEGAGEMFRVTTLDMEN 183

Query: 190 -------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+    +     Q      A  F   +   P FR E+  + R   E
Sbjct: 184 VPKNADGSVDYTKDFFNKETSLTVSGQLNAETYAQAFRNVYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSN 272
           F+ ++ E++F + DD +   E +L+ +                            N VS+
Sbjct: 244 FWMVEPEIAFADLDDNMILAEAMLKHIINYVLENAPEEMNFFNSFVDKGLLDRLHNVVSS 303

Query: 273 NFLRICYDDAIRRY--GTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
            F R+ Y +AI       DK D +    +   TEH  +    VF + + V    +  
Sbjct: 304 EFARVTYTEAIEILEKNNDKFDFKVSWGVDLQTEHERYLTEEVFKRPVFVTDYPKDI 360



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 51/150 (34%), Gaps = 24/150 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +         ++ D+P        K I      F M          ND     A  
Sbjct: 338 HERYLTEEVFKRPVFVTDYP--------KDIKA----FYMKM--------NDDNKTVAAV 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    E+  G  R    + +L+    + +  E  +          + G   H G   
Sbjct: 378 DCLVPGIGELIGGSQREDDYDKLLKRMQEMNLDPEEYQ----FYLDLRKYGSTRHAGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R VM L G  N+R+V  FP + N C+L
Sbjct: 434 GFERCVMYLTGMSNIRDVIPFPRTVNNCEL 463


>gi|114673279|ref|XP_512149.2| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic isoform 5 [Pan
           troglodytes]
 gi|114673281|ref|XP_001139185.1| PREDICTED: asparaginyl-tRNA synthetase isoform 4 [Pan troglodytes]
          Length = 548

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 70/344 (20%), Positives = 126/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V   +         + +E  + + G+
Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGM 184

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 185 LNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 240

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ +    R       + E + P L  +  EG           + +F  L Q
Sbjct: 241 NMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 298

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  DD+LN +E++
Sbjct: 299 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLEDL 357

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 358 VCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAIVWLKEHDVKKEDG-TFYEFG 416

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 417 EDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDSRLTE 460



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +S     +         L+ N  EI  G +R   SE +L  +  
Sbjct: 439 RFPVEIKSFYMQRCPEDSRLTESVDV-------LMPNVGEIVGGSMRIFNSEEILAGYKR 491

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 492 EGIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCT 547

Query: 571 L 571
            
Sbjct: 548 P 548


>gi|322792670|gb|EFZ16544.1| hypothetical protein SINV_10183 [Solenopsis invicta]
          Length = 584

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 10/264 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G +       ++G VH +R  G  +IF D+R      QV+AN  +  +E      ++   
Sbjct: 105 GETLENEVHSIAGRVHSIRGSGAKLIFYDLRGEGVKVQVMAN--ARLYESEDKFVADTAK 162

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++    +   A    G+  +  + + +LS      LP        +  RF+ R+L
Sbjct: 163 IKRGDIIGIVGKP--AKSKKGEFSIIPRSVTLLSPCL-HMLPHLYFGLKDKETRFRQRYL 219

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQG 189
           DL   D + +    R +II  MR  +    F+E  TP++   +    A+ F+        
Sbjct: 220 DLILNDKVRQIFHIRAKIIAYMRKFLDNMGFLEVETPMMNMIAGGAIAKPFVTHHNELNM 279

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D+
Sbjct: 280 DLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYNDL 337

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN 273
           +   E+++ G+ +       +  +
Sbjct: 338 MEITESMVSGMVKAIHGTYKIEYH 361


>gi|327539372|gb|EGF25990.1| asparaginyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 466

 Score =  180 bits (457), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 62/314 (19%), Positives = 118/314 (37%), Gaps = 29/314 (9%)

Query: 21  VRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSEWVLCIDGL 76
           V + GW+   R   GG  FL++ D   +  +     +      E  + + +   + + G 
Sbjct: 23  VEIRGWIRTRRDSKGGFSFLEVNDGTSLGNLQVVAPAELENYAEEIQKLTAGCSVVVQGE 82

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++   A+  +        EL A  + ++   +    P+  +R   E +R ++  L  R +
Sbjct: 83  LVESPAKGQST-------ELHASSVRVIGWCDGETYPLQKKRHSFEKLR-EWSHLRARTN 134

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------- 189
           TL   +  R RI  S+      E F    TPI+TAS  EGA +    + +N         
Sbjct: 135 TLGAVMRVRNRISQSIHRFFDDEGFNYLHTPIITASDCEGAGEMFRVTTLNLEKLAGSNR 194

Query: 190 ------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+  P       Q +    A+   R +   P FR E+  + R   EF+ ++ E
Sbjct: 195 PFDTKQDFFQKPTHLTVSGQLEAETYATALSRVYTFGPTFRAENSNTSRHLAEFWMVEPE 254

Query: 241 MSFVEQDDILNTMENVLRGVFEE-FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            +F + +D +   E  L+ VF +  S+     + F        I +  +        +  
Sbjct: 255 AAFYDLNDNMQLAERFLKRVFSDCLSHCGEDMDFFNERIEKGKIDQLKSVIEKPFEHMTY 314

Query: 300 HNVTEHFVHSEFRV 313
            +  E  +  + + 
Sbjct: 315 TDAVERLLACDEKF 328



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 12/116 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
               +  PF M        + +D     A    LV    EI  G  R    +V+ +  + 
Sbjct: 358 DYPSSIKPFYM--------RVSDDGKTVAAMDVLVPGVGEIIGGSQREERLDVLQRRMAE 409

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+     E+ +       + G  PH G   G++R V  + G  N+R+V  FP + 
Sbjct: 410 GGLD----ESEYWWYVDLRRYGTVPHAGFGLGLERAVQYVTGMANIRDVIPFPRTP 461


>gi|116253922|ref|YP_769760.1| lysyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|123081767|sp|Q1MBK9|SYK_RHIL3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|115258570|emb|CAK09674.1| putative lysyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 498

 Score =  180 bits (456), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 65/327 (19%), Positives = 129/327 (39%), Gaps = 22/327 (6%)

Query: 2   HRYRTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +L                V ++G V+  R  G  +F+DI D  G  Q+ ++
Sbjct: 36  HFHRTMTNAELIAKYENLEPDVETQDVVTVAGRVYSSRNSG--MFMDIHDARGKIQIFSH 93

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D+   E    +    +  I G+  S            G++ ++AQ I +L+ +  LP+P
Sbjct: 94  KDTTPEEARALLPMIDIGDIIGVTGSVR------RTKRGELTINAQTITMLTKSL-LPMP 146

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                     +R++ R LD+  +   K    +R++I++ +R  M  + F+E  TP+L + 
Sbjct: 147 EKWHGLSDIELRYRKRHLDIMTNEDSKLRFQQRSKILSGIRRFMENDGFMEVETPMLQSV 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLP 231
                 +              L  AP+ + +  + SG  D+ F++   FR+E   +   P
Sbjct: 207 YGGATAEPFKTHHNTLKLDMYLRIAPELFLKRTLISGLTDKVFEVNRNFRNEGVSTRHNP 266

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF  ++   ++ + +DI++ +E +   +                + +    +R     P
Sbjct: 267 -EFTMMECYWAYADYEDIMDLVERLFESLALSIHGTTEFPFGDKTMSFKGPFKR--VPMP 323

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKIL 318
           D        +        E RV +K  
Sbjct: 324 DAVKEATGIDFRAIKTDEEARVAAKAA 350



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 7/133 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMS 501
           +E   E   I  +H   T     +           +   +++  CN +E+ +     +  
Sbjct: 368 FEEKVESTLIQPSH--VTHFPKDISPFAKEVPGEPRLVERFETYCNAWELGNAFSELNDP 425

Query: 502 EVMLQAFSNVGISKEVVENR----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   +              +          A   GMPP GG+  G+DR++MLL  A ++R
Sbjct: 426 EEQRRRMVEQLEQAHARGEKEKQLDEEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIR 485

Query: 558 EVSLFPMSQNFCD 570
           +V LFP  ++  D
Sbjct: 486 DVILFPARRSKAD 498


>gi|259501003|ref|ZP_05743905.1| lysine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302190548|ref|ZP_07266802.1| lysyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309803748|ref|ZP_07697834.1| lysine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|309804565|ref|ZP_07698630.1| lysine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|309808736|ref|ZP_07702622.1| lysine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|309809596|ref|ZP_07703453.1| lysine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|312871562|ref|ZP_07731655.1| lysine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312874310|ref|ZP_07734342.1| lysine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|315653937|ref|ZP_07906853.1| lysine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325912448|ref|ZP_08174843.1| lysine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|329920483|ref|ZP_08277215.1| lysine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|259167697|gb|EEW52192.1| lysine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|308164157|gb|EFO66418.1| lysine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308165957|gb|EFO68175.1| lysine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308167972|gb|EFO70104.1| lysine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308170077|gb|EFO72113.1| lysine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|311090183|gb|EFQ48595.1| lysine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311092957|gb|EFQ51308.1| lysine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|315488633|gb|EFU78279.1| lysine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325475790|gb|EGC78961.1| lysine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|328936159|gb|EGG32612.1| lysine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 503

 Score =  180 bits (456), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 70/335 (20%), Positives = 125/335 (37%), Gaps = 31/335 (9%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVM 78
           R++G +   R  G + F DI D  G  Q+    D      ++I K       L IDG VM
Sbjct: 61  RVAGRMLAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYQIFKQADLGDFLGIDGHVM 120

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                       TG++ + A  I  LS A   PLP            ++ R+LDL  +  
Sbjct: 121 KTD---------TGELTIRASHITFLSKALR-PLPDKYHGLQNVEQIYRQRYLDLISNQD 170

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQ 196
                  RT+II ++R  + + +F+E  TP+L        AR F+        + Y +  
Sbjct: 171 SYKRFLNRTKIIQAIRDYLNSLDFLEVETPVLHNIPGGAEARPFITHHNALDINLY-MRI 229

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A +   + L+    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  E +
Sbjct: 230 ALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELETYCAYWDFHDVMDEAEGI 288

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +R   +                 D  I   GTD  DL       ++ +         F +
Sbjct: 289 IRAAAKVV-------------SEDGKINYQGTD-IDLGKSFRRVHMVDLIKEKSGVDFWQ 334

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
            ++ +   ++                 +N +    
Sbjct: 335 PMTDDEAKKIAEEHGIQCEKFWKVGHVINAFFEEF 369



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 66/388 (17%), Positives = 117/388 (30%), Gaps = 43/388 (11%)

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R     ++ L    Q Y+Q  +                      R       +     ++
Sbjct: 142 RPLPDKYHGLQNVEQIYRQRYL------------DLISNQDSYKRFLNRTKIIQAIRDYL 189

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              D L     VL  +          +     I + +A+      +  L  P+    V +
Sbjct: 190 NSLDFLEVETPVLHNI-------PGGAEARPFITHHNALDINLYMRIALELPLKRLIVGD 242

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL- 363
                E     +   ++  +       +       F D M+E        G+     ++ 
Sbjct: 243 MERVYEIGRVFRNEGLDTHHNPEFTELETYCAYWDFHDVMDE------AEGIIRAAAKVV 296

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGDPLKFCSFAADARNHIAQ 422
            E G +   G             +   +  + G D    +  D  K           IA+
Sbjct: 297 SEDGKINYQGTDIDLGKSFRRVHMVDLIKEKSGVDFWQPMTDDEAK----------KIAE 346

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E GI     ++   +++  F+E   E   I      +  P       K N        ++
Sbjct: 347 EHGIQCEKFWKVGHVINA-FFEEFCE-GTIVDPTFVYGHPVEISPLAKKNKKDPRFTDRF 404

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGG 538
           ++   G E  +     +      Q F      +    +          RA + GMPP GG
Sbjct: 405 EIFILGKEYGNAFTELNDPIDQRQRFEAQMAERAAGNDEADMIDEDYIRAMEFGMPPTGG 464

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 465 LGIGIDRLVMLLTNAPAIRDVLLFPTMR 492


>gi|203284026|ref|YP_002221766.1| asparaginyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|201083469|gb|ACH93060.1| asparaginyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 461

 Score =  180 bits (456), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 74/386 (19%), Positives = 132/386 (34%), Gaps = 50/386 (12%)

Query: 1   MHRYRTHSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           MH+    S  + L      S + + GW+   R +G I FL+I D   I  + A  D    
Sbjct: 1   MHK----SIKEILNNPITNSTITVKGWIRTKRSNGKISFLEINDGSNIKGIQAVIDENNP 56

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  K    E+     G  +S +   I +       E+      I+  +++   P+  +R 
Sbjct: 57  QFEKK---EFKKLTTGASISLTGILILSPAKGQTYEIKTTNFYIIGESDQETYPLQKKRH 113

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +   L +R +T       + +I   +        F    TPI+T++  EG  +
Sbjct: 114 SFEFLR-EIPHLRIRTNTFGAVARIKNQISYKIHEYFQKNGFFYIHTPIITSNDGEGVGE 172

Query: 180 FLVPSRVN------------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
               S +N            +  F+   A      Q      A    + +   P FR E+
Sbjct: 173 IFRVSTLNLNNIENKKEIDFKDDFFGKQAFLTVTGQLHGEAYAMALSKIYTFGPTFRAEN 232

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN------------ 272
             + R   EF+ ++ EM+F   +D +N  E+ L+ V  E  N                  
Sbjct: 233 SNTTRHASEFWMIEPEMAFFTLEDNINLAEDFLKYVLSETLNHCHEDMEFFDNFIEKGVI 292

Query: 273 ---------NFLRICYDDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSV- 320
                     F  I Y  AI++           P    ++ TEH  +    +  K  +V 
Sbjct: 293 KKIEDVINSKFEVITYTQAIKKLENATKTFEIKPYWGMDLQTEHERYLTEEIIKKPTTVI 352

Query: 321 --NPGYEVWAIPAKGGGGNRAFCDRM 344
                ++ + +            D +
Sbjct: 353 DYPKEFKAFYMKMNQDNKTVKGMDIL 378



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + +                + G  PH G   G+
Sbjct: 378 LVPRIGEIIGGSEREDNLDKLNNRIKELNLET----ETLNWYLDLRRFGSTPHSGFGLGL 433

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R++    G  N+R+V  FP +  
Sbjct: 434 ERLLQYTTGMANIRDVIPFPRTPK 457


>gi|77735669|ref|NP_001029528.1| lysyl-tRNA synthetase [Bos taurus]
 gi|74354788|gb|AAI02323.1| Lysyl-tRNA synthetase [Bos taurus]
          Length = 623

 Score =  180 bits (456), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 58/276 (21%), Positives = 115/276 (41%), Gaps = 15/276 (5%)

Query: 6   THSCGDLGVSDVGS-----FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           TH   +      G       ++++G +H  R  G  +IF D+R      QV+AN  S  +
Sbjct: 132 THFIQEYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNY 189

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  +           G ++             G++ +   +I +LS      LP      
Sbjct: 190 KSEEEFIRINNKLRRGDIIGVQGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGL 246

Query: 120 YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
             +  R++ R+LDL  +   +   + R++II  +R  +    F+E  TP++        A
Sbjct: 247 KDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVA 306

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   
Sbjct: 307 KPFITYHNELDMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTC 364

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +  M++ +  D++   E ++ G+ +  +    V+ +
Sbjct: 365 EFYMAYADYHDLMEITEKMISGMVKHITGSYKVTYH 400



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 505 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDETFCTALE 564

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG   GIDR+ M L  + N++EV LFP  +
Sbjct: 565 YGLPPTGGWGMGIDRVTMFLTDSNNIKEVLLFPAMK 600


>gi|4758762|ref|NP_004530.1| asparaginyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|3915059|sp|O43776|SYNC_HUMAN RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|2764505|emb|CAA04008.1| asparaginyl-tRNA synthetase [Homo sapiens]
 gi|3894218|dbj|BAA34600.1| Asparaginyl tRNA Synthetase [Homo sapiens]
 gi|12804549|gb|AAH01687.1| Asparaginyl-tRNA synthetase [Homo sapiens]
 gi|119583452|gb|EAW63048.1| asparaginyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|261859390|dbj|BAI46217.1| asparaginyl-tRNA synthetase [synthetic construct]
          Length = 548

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 70/344 (20%), Positives = 126/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V   +         + +E  + + G+
Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGM 184

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 185 LNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 240

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ +    R       + E + P L  +  EG           + +F  L Q
Sbjct: 241 NMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 298

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  DD+LN +E++
Sbjct: 299 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLEDL 357

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 358 VCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAIVWLKEHDVKKEDG-TFYEFG 416

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 417 EDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDSRLTE 460



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +S     +         L+ N  EI  G +R   SE +L  +  
Sbjct: 439 RFPVEIKSFYMQRCPEDSRLTESVDV-------LMPNVGEIVGGSMRIFDSEEILAGYKR 491

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 492 EGIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCT 547

Query: 571 L 571
            
Sbjct: 548 P 548


>gi|312874830|ref|ZP_07734849.1| lysine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311089575|gb|EFQ48000.1| lysine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 503

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 17/249 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVM 78
           R++G +   R  G + F DI D  G  Q+    D      ++I K       L IDG VM
Sbjct: 61  RVAGRMLAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYQIFKQADLGDFLGIDGHVM 120

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                       TG++ + A  I  LS A   PLP            ++ R+LDL  +  
Sbjct: 121 KTD---------TGELTIRASHITFLSKALR-PLPDKYHGLQNVEQIYRQRYLDLISNQD 170

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQ 196
                  RT+II ++R  + + +F+E  TP+L        AR F+        + Y +  
Sbjct: 171 SYKRFLNRTKIIQAIRDYLNSLDFLEVETPVLHNIPGGAEARPFITHHNALDINLY-MRI 229

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A +   + L+    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  E +
Sbjct: 230 ALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELETYCAYWDFHDVMDEAEGI 288

Query: 257 LRGVFEEFS 265
           +R   +  S
Sbjct: 289 IRAAAKVVS 297



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 66/388 (17%), Positives = 117/388 (30%), Gaps = 43/388 (11%)

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R     ++ L    Q Y+Q  +                      R       +     ++
Sbjct: 142 RPLPDKYHGLQNVEQIYRQRYL------------DLISNQDSYKRFLNRTKIIQAIRDYL 189

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              D L     VL  +          +     I + +A+      +  L  P+    V +
Sbjct: 190 NSLDFLEVETPVLHNI-------PGGAEARPFITHHNALDINLYMRIALELPLKRLIVGD 242

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL- 363
                E     +   ++  +       +       F D M+E        G+     ++ 
Sbjct: 243 MERVYEIGRVFRNEGLDTHHNPEFTELETYCAYWDFHDVMDE------AEGIIRAAAKVV 296

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGDPLKFCSFAADARNHIAQ 422
            E G +   G             +   +  + G D    +  D  K           IA+
Sbjct: 297 SEDGKINYQGTDIDLGKSFRRVHMVDLIKEKSGVDFWQPMTDDEAKT----------IAE 346

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E GI     ++   +++  F+E   E   I      +  P       K N        ++
Sbjct: 347 EHGIQCEKFWKVGHVINA-FFEEFCE-GTIVDPTFVYGHPVEISPLAKKNKKDPRFTDRF 404

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGG 538
           ++   G E  +     +      Q F      +    +          RA + GMPP GG
Sbjct: 405 EIFILGKEYGNAFTELNDPIDQRQRFEAQMAERAAGNDEADMIDEDYIRAMEFGMPPTGG 464

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 465 LGIGIDRLVMLLTNAPAIRDVLLFPTMR 492


>gi|253582830|ref|ZP_04860050.1| asparagine-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251835406|gb|EES63947.1| asparagine-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 463

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 66/372 (17%), Positives = 126/372 (33%), Gaps = 61/372 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
           +   V +SGW+ ++R      F++I D       Q+V +     F+    +     + ++
Sbjct: 17  IDQEVEISGWIKKIRVQKNFGFIEINDGSFFKGIQIVFDAKLNNFDEISRLSIISSIRVN 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++               IE+ A  IEI   A+ L  P+  +R   E +R K   L  R
Sbjct: 77  GKLVKSQGAG-------QDIEIVADSIEIYQKAD-LDYPLQNKRHTFEYLRTK-AHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS---- 190
            +T       R+ I  ++        F+   TPI+T S  EGA +    + ++       
Sbjct: 128 TNTFSAVFRVRSVIAYAIHKFFQENGFVYVHTPIITGSDAEGAGEMFRVTTLDLNDLPKG 187

Query: 191 ----------FYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q       + F   +   P FR E   + R   EF+ +
Sbjct: 188 EDGKVDSSKDFFGKETNLTVSGQLSGETYCAAFRNIYTFGPTFRAEYSNTARHASEFWMI 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F + +  +   E +++ + +           F                      R
Sbjct: 248 EPEIAFADLEANMELAEAMVKYIIKYVLEQCPEEMEFFNQFIEKGLFDKLNNVLNSEFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           + Y +AI            P+   +   +EH  +     F K + +    +         
Sbjct: 308 LTYTEAIEILEKSGKKFDYPVKWGIDLQSEHERYLAEEYFKKPVFLTDYPKDI------- 360

Query: 335 GGNRAFCDRMNE 346
              +AF  ++NE
Sbjct: 361 ---KAFYMKLNE 369



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P        K I      F M           D  +++A   DL+  G  EI
Sbjct: 349 KPVFLTDYP--------KDIKA----FYMK-------LNEDGKTVRAM--DLLAPGIGEI 387

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    E++    + +G++       +G      + G  PH G   G +RI+M + 
Sbjct: 388 IGGSQREDNLEILEGRINELGMNI----EDYGFYLDLRKYGSFPHSGYGLGFERIIMYIT 443

Query: 552 GAKNVREVSLFPMSQN 567
           G  N+R+V  FP + N
Sbjct: 444 GMTNIRDVIPFPRTPN 459


>gi|303284531|ref|XP_003061556.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456886|gb|EEH54186.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 448

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 66/306 (21%), Positives = 118/306 (38%), Gaps = 16/306 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFEIAKSVRSEW 69
             + V   V L G VH VR  G   FL +R          +         +    + +E 
Sbjct: 2   TAARVNETVTLRGRVHNVRGKGKSAFLILRQQTATCVFFVDDVDVSKGMVKWVSKLEAES 61

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP-------- 121
           V+ I G V++  +E    +    ++EL    +  +S + +       + +          
Sbjct: 62  VIDISG-VVAVPSEGPVVSCTQKEVELVVHSVYCVSRSIDDASRPESDFDKEDGAQYVRV 120

Query: 122 -ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            +  R  YR +DLR          ++ +    R  +  ++F+E  TP L   + EG    
Sbjct: 121 LQDTRLNYRVIDLRTPANQAIFRVQSAVCELFREALRRKDFVEIHTPKLIGGASEGGASV 180

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                   G    L Q+PQ YKQ+ + +  DR F+I P FR E+  + R   EF  LDME
Sbjct: 181 FKLDY--MGQPACLAQSPQLYKQMAIEADMDRVFEIGPVFRAENSNTHRHLCEFTGLDME 238

Query: 241 MSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           M+  E   ++L+ + ++   +F+  +         +   +     +Y      L  P  +
Sbjct: 239 MTIKEHYSEVLDVLNDLFLHMFDGLNERFKHELEVVNAQHPFEPLKYLNPTLRLTFPEGI 298

Query: 300 HNVTEH 305
             + +H
Sbjct: 299 KMLQDH 304



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 60/163 (36%), Gaps = 24/163 (14%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMES 468
                D      + LG +    ++     DF          K      PF TMP      
Sbjct: 309 VDPLGDLSTEQERVLGQLVKEKYD----TDFYILH------KYPLNARPFYTMPCPHDGD 358

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              +         +D+   G EI SG  R H  E++ +     GI  E ++        A
Sbjct: 359 YTNS---------FDIFIRGEEIISGAQRIHDVELLSKRAVECGIEIETIQA----YIDA 405

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           F+ G  PHGG   G++R+VML L   N+R+ S+FP        
Sbjct: 406 FKYGALPHGGCGVGLERVVMLFLNLGNIRKTSMFPRDPRRLAP 448


>gi|114673285|ref|XP_001138942.1| PREDICTED: asparaginyl-tRNA synthetase isoform 2 [Pan troglodytes]
          Length = 515

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 70/344 (20%), Positives = 126/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V   +         + +E  + + G+
Sbjct: 92  GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGM 151

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 152 LNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 207

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ +    R       + E + P L  +  EG           + +F  L Q
Sbjct: 208 NMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 265

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  DD+LN +E++
Sbjct: 266 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLEDL 324

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 325 VCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAIVWLKEHDVKKEDG-TFYEFG 383

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 384 EDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDSRLTE 427



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +S     +         L+ N  EI  G +R   SE +L  +  
Sbjct: 406 RFPVEIKSFYMQRCPEDSRLTESVDV-------LMPNVGEIVGGSMRIFNSEEILAGYKR 458

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 459 EGIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCT 514

Query: 571 L 571
            
Sbjct: 515 P 515


>gi|312872573|ref|ZP_07732641.1| lysine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311091935|gb|EFQ50311.1| lysine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
          Length = 503

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 70/335 (20%), Positives = 125/335 (37%), Gaps = 31/335 (9%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVM 78
           R++G +   R  G + F DI D  G  Q+    D      ++I K       L IDG VM
Sbjct: 61  RVAGRMLAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYQIFKQADLGDFLGIDGHVM 120

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                       TG++ + A  I  LS A   PLP            ++ R+LDL  +  
Sbjct: 121 KTD---------TGELTIRASHITFLSKALR-PLPDKYHGLQNVEQIYRQRYLDLISNQD 170

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQ 196
                  RT+II ++R  + + +F+E  TP+L        AR F+        + Y +  
Sbjct: 171 SYKRFLNRTKIIQAIRDYLNSLDFLEVETPVLHNIPGGAEARPFITHHNALDINLY-MRI 229

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A +   + L+    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  E +
Sbjct: 230 ALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELETYCAYWDFHDVMDEAEGI 288

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +R   +                 D  I   GTD  DL       ++ +         F +
Sbjct: 289 IRAAAKVV-------------SEDGKINYQGTD-IDLGKSFRRVHMVDLIKEKSGVDFWQ 334

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
            ++ +   ++                 +N +    
Sbjct: 335 PMTDDEAKKIAEEHGIQCEKFWKVGHVINAFFEEF 369



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 66/388 (17%), Positives = 117/388 (30%), Gaps = 43/388 (11%)

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R     ++ L    Q Y+Q  +                      R       +     ++
Sbjct: 142 RPLPDKYHGLQNVEQIYRQRYL------------DLISNQDSYKRFLNRTKIIQAIRDYL 189

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              D L     VL  +          +     I + +A+      +  L  P+    V +
Sbjct: 190 NSLDFLEVETPVLHNI-------PGGAEARPFITHHNALDINLYMRIALELPLKRLIVGD 242

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL- 363
                E     +   ++  +       +       F D M+E        G+     ++ 
Sbjct: 243 MERVYEIGRVFRNEGLDTHHNPEFTELETYCAYWDFHDVMDE------AEGIIRAAAKVV 296

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGDPLKFCSFAADARNHIAQ 422
            E G +   G             +   +  + G D    +  D  K           IA+
Sbjct: 297 SEDGKINYQGTDIDLGKSFRRVHMVDLIKEKSGVDFWQPMTDDEAK----------KIAE 346

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E GI     ++   +++  F+E   E   I      +  P       K N        ++
Sbjct: 347 EHGIQCEKFWKVGHVINA-FFEEFCE-GTIVDPTFVYGHPVEISPLAKKNKKDPRFTDRF 404

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGG 538
           ++   G E  +     +      Q F      +    +          RA + GMPP GG
Sbjct: 405 EIFILGKEYGNAFTELNDPIDQRQRFEAQMAERAAGNDEADMIDEDYIRAMEFGMPPTGG 464

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 465 LGIGIDRLVMLLTNAPAIRDVLLFPTMR 492


>gi|50419493|ref|XP_458273.1| DEHA2C13684p [Debaryomyces hansenii CBS767]
 gi|59798687|sp|Q6BU46|SYNC_DEBHA RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|49653939|emb|CAG86350.1| DEHA2C13684p [Debaryomyces hansenii]
          Length = 552

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 65/345 (18%), Positives = 123/345 (35%), Gaps = 30/345 (8%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           ++G+ V + GW+HR+R   G+ F+ +RD  G  Q +   D A  +    +  E  + I G
Sbjct: 125 NIGTRVVVQGWIHRLRLQKGLGFITLRDGTGFIQCILTGDLAKCKTTHELTLESTVTIKG 184

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--REYPESIRFKYRFLDL 133
           ++              G +EL     E++ +A         +       S+    R L L
Sbjct: 185 VINKLPEG----KSAPGGVELKVDYYEVVGLAPSGEEAFSNKVQENADPSLLLDQRHLAL 240

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R ++L   +  R+ ++ ++R     E  +E + P +  +  EG           + ++  
Sbjct: 241 RGESLSAVMKVRSTLLQAIRRFFAEEGLLEVTPPCMVQTQVEGGSTLFKMDYYGEEAY-- 298

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  +       F +   FR E   + R   E+  ++ E+ F+E DD+L  +
Sbjct: 299 LTQSSQLYLETCLP-ALGDVFCVQESFRAEKSHTRRHLSEYTHIESELGFIEFDDLLTHL 357

Query: 254 ENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRY------GTDKPDL 293
           E ++  V +                 N       F R+ Y  A+           D    
Sbjct: 358 ERLITYVVKYVVEDPVAGPLIKQLNPNFVPPQMPFKRMEYIHALDWLNEHGIPNEDGEKF 417

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
           +    +    E    ++      +L   P         K     R
Sbjct: 418 KFGDDIAEAAER-KMTDTIGVPILLIRFPVEIKSFYMQKCADDPR 461



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+    EI  G +R + ++ ++ A   
Sbjct: 443 RFPVEIKSFYMQKCADDPRVTESVDV-------LMPTVGEITGGSMRTYDNDELVAAIKR 495

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+      + +       + G  PHGG   G +RI+  L     VR+ SL+P     C 
Sbjct: 496 EGLDL----DSYYWFTDQRKYGTCPHGGYGLGTERILAWLCDRFTVRDCSLYPRFTGRCK 551

Query: 571 L 571
            
Sbjct: 552 P 552


>gi|325496868|gb|EGC94727.1| asparaginyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 466

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 126/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +     Q E+ A  +E+    E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASPGQGQQFEIQASMVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +DI    E +L+ VF+                            +  +F ++
Sbjct: 252 PEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVTILENCGKKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+ +    +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|312869229|ref|ZP_07729401.1| asparagine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311095250|gb|EFQ53522.1| asparagine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 432

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 69/352 (19%), Positives = 131/352 (37%), Gaps = 33/352 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAK-SVRSE 68
               VG  VR+  W+   R  G I FL +RD  G  Q +    + D   FE+AK  +  E
Sbjct: 9   SPQHVGETVRIGVWLTDKRSSGKIAFLQLRDGTGFFQGIIRKNDVDEETFELAKHDLHQE 68

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
               + G +                 E+    I+++  ++E P    G +E+       +
Sbjct: 69  TSFYVTGEIAEDKRSKF-------GYEIHITDIDVVGTSDEYP---IGNKEHGIDFLLDH 118

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R L LR       +  R+R+  +         F +   PILT S+PEG  +       ++
Sbjct: 119 RHLWLRSRKPWALMRIRSRVKLATMEFFNKHGFTQFDAPILTGSAPEGTTELFETDYFDR 178

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            ++  L Q+ Q Y     A    R + + P FR E  ++ R   EF+ ++ EM++  +++
Sbjct: 179 SAY--LSQSGQLY-GEAGAMALGRIYTMGPTFRAEKSKTRRHLMEFWMIEPEMAWCHEEE 235

Query: 249 ILNTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPD 292
                E  +  + ++  +                       + RI Y +AI        D
Sbjct: 236 SEEIQEQYVAYLIQDLIDNCPLELEMVGRSVESLKPFTELPYPRITYKEAIDMLQKGGLD 295

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           ++      +  E ++  +F+    I +     + + +P       +  C  +
Sbjct: 296 VKYGDDFGSPEETYLADQFQKPVFIKNYPKEIKAFYMPTDPEDDRQVICADL 347



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 27/163 (16%)

Query: 414 ADARNHIAQELGIINC----NCF-EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                    + G        + F +  +I ++P     +E K      +P          
Sbjct: 292 GGLDVKYGDDFGSPEETYLADQFQKPVFIKNYP-----KEIKAFYMPTDP-----EDDRQ 341

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +   DLL+ + +         EI  G  R++  + +       G+SK      +G     
Sbjct: 342 VICADLLAPEGYG--------EIIGGSERSYDYDYITSKLEENGLSK----ENYGWYDDL 389

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            + G  PH G   G++R +  +    ++RE   FP   N  + 
Sbjct: 390 RKYGSVPHSGFGMGLERFLSWVTLQDHIRENIPFPRMLNRLNP 432


>gi|119616027|gb|EAW95621.1| lysyl-tRNA synthetase, isoform CRA_c [Homo sapiens]
          Length = 634

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 59/287 (20%), Positives = 115/287 (40%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 164 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFIHINNKLRRGDIIGV 221

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +   +I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 222 QGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 278

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 279 QKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 337

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ 
Sbjct: 338 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMVS 396

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          ++ Y            D   P    N+ E 
Sbjct: 397 GMVKHITGSY-------KVTYHPDGPEGQAYDVDFTPPFRRINMVEE 436



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 516 KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 575

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 576 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMK 611


>gi|119583453|gb|EAW63049.1| asparaginyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
          Length = 547

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 70/344 (20%), Positives = 126/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V   +         + +E  + + G+
Sbjct: 124 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGM 183

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 184 LNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 239

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ +    R       + E + P L  +  EG           + +F  L Q
Sbjct: 240 NMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 297

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  DD+LN +E++
Sbjct: 298 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLEDL 356

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 357 VCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAIVWLKEHDVKKEDG-TFYEFG 415

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 416 EDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDSRLTE 459



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +S     +         L+ N  EI  G +R   SE +L  +  
Sbjct: 438 RFPVEIKSFYMQRCPEDSRLTESVDV-------LMPNVGEIVGGSMRIFDSEEILAGYKR 490

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 491 EGIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCT 546

Query: 571 L 571
            
Sbjct: 547 P 547


>gi|311897070|dbj|BAJ29478.1| putative aspartyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 435

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 78/296 (26%), Positives = 133/296 (44%), Gaps = 30/296 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI--- 61
           RT    DL  S +   V + GW++ +R    + F+ +RDH G+ QV         EI   
Sbjct: 3   RT-LVADL-PSHLDETVTVYGWINTLRLQRRMQFVLVRDHTGLIQVTHARGGEGDEIEAA 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            + V +E  + I G V+       N  +  G +E+  +++E++S AE        +    
Sbjct: 61  FERVTAESAVKITGKVVG------NPQVKLGGLEIVPERVEVVSPAEPKLPI---DEHTG 111

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              R  +RFLD+RR + H     +T +  +MR     E F E  TP L  ++ E   +  
Sbjct: 112 LDQRLDWRFLDIRRPSQHLVFAVQTTVEQAMREVTAEEGFTELHTPKLMGTASESGAEVF 171

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + ++ A  Q+PQ YKQ+ +A+G D+ F+I P FR E   + R   EF  +D E+
Sbjct: 172 KVDYFERTAYLA--QSPQFYKQMAIAAGIDKVFEIGPVFRAEPSFTSRHATEFTGVDAEL 229

Query: 242 SFVE-QDDILNTMENVLRGVFEEFSNGN-------------TVSNNFLRICYDDAI 283
           ++++  +D++   E +L+ V    S  +                  F R+   DA+
Sbjct: 230 AWIDGVEDVMAFEERLLQRVLRRVSERHGDAVTEHFGARVVVPETPFPRLTMADAL 285



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 35/110 (31%), Gaps = 24/110 (21%)

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                EF ++  FP             +  PF   +   +              +DL+  
Sbjct: 316 EETGHEFVFVTRFP------------ASVRPFYHLRPEDDP--------TVTESFDLLWK 355

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           G EI +G  R H  E ++      G+          G    F+ G PPHG
Sbjct: 356 GVEITTGAQREHRHERLIAQAREKGMET----EPLAGYLNCFRFGTPPHG 401


>gi|309806964|ref|ZP_07700946.1| lysine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308166584|gb|EFO68781.1| lysine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 503

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 70/335 (20%), Positives = 125/335 (37%), Gaps = 31/335 (9%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVLCIDGLVM 78
           R++G +   R  G + F DI D  G  Q+    D      ++I K       L IDG VM
Sbjct: 61  RVAGRMLAKRGKGKVGFADIYDRTGKIQIYVRKDIVGEENYQIFKQADLGDFLGIDGHVM 120

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                       TG++ + A  I  LS A   PLP            ++ R+LDL  +  
Sbjct: 121 KTD---------TGELTIRASHITFLSKALR-PLPDKYHGLQNVEQIYRQRYLDLISNQD 170

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQ 196
                  RT+II ++R  + + +F+E  TP+L        AR F+        + Y +  
Sbjct: 171 SYKRFLNRTKIIQAIRDYLNSLDFLEVETPVLHNIPGGAEARPFITHHNALDINLY-MRI 229

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A +   + L+    +R ++I   FR+E   +   P EF +L+   ++ +  D+++  E +
Sbjct: 230 ALELPLKRLIVGDMERVYEIGRVFRNEGLDTHHNP-EFTELETYCAYWDFHDVMDEAEGI 288

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +R   +                 D  I   GTD  DL       ++ +         F +
Sbjct: 289 IRAAAKVV-------------SEDGKINYQGTD-IDLGKSFRRVHMVDLIKEKSGVDFWQ 334

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
            ++ +   ++                 +N +    
Sbjct: 335 PMTDDEAKKIAEEHGIQCEKFWKVGHVINAFFEEF 369



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 66/388 (17%), Positives = 117/388 (30%), Gaps = 43/388 (11%)

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           R     ++ L    Q Y+Q  +                      R       +     ++
Sbjct: 142 RPLPDKYHGLQNVEQIYRQRYL------------DLISNQDSYKRFLNRTKIIQAIRDYL 189

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              D L     VL  +          +     I + +A+      +  L  P+    V +
Sbjct: 190 NSLDFLEVETPVLHNI-------PGGAEARPFITHHNALDINLYMRIALELPLKRLIVGD 242

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL- 363
                E     +   ++  +       +       F D M+E        G+     ++ 
Sbjct: 243 MERVYEIGRVFRNEGLDTHHNPEFTELETYCAYWDFHDVMDE------AEGIIRAAAKVV 296

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGDPLKFCSFAADARNHIAQ 422
            E G +   G             +   +  + G D    +  D  K           IA+
Sbjct: 297 SEDGKINYQGTDIDLGKSFRRVHMVDLIKEKSGVDFWQPMTDDEAK----------KIAE 346

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E GI     ++   +++  F+E   E   I      +  P       K N        ++
Sbjct: 347 EHGIQCEKFWKVGHVINA-FFEEFCE-GTIVDPTFVYGHPVEISPLAKKNKKDPRFTDRF 404

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMPPHGG 538
           ++   G E  +     +      Q F      +    +          RA + GMPP GG
Sbjct: 405 EIFILGKEYGNAFTELNDPIDQRQRFEAQMAERAAGNDEADMIDEDYIRAMEFGMPPTGG 464

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +  GIDR+VMLL  A  +R+V LFP  +
Sbjct: 465 LGIGIDRLVMLLTNAPAIRDVLLFPTMR 492


>gi|296478235|gb|DAA20350.1| lysyl-tRNA synthetase [Bos taurus]
          Length = 623

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 58/276 (21%), Positives = 115/276 (41%), Gaps = 15/276 (5%)

Query: 6   THSCGDLGVSDVGS-----FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           TH   +      G       ++++G +H  R  G  +IF D+R      QV+AN  S  +
Sbjct: 132 THFIQEYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNY 189

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  +           G ++             G++ +   +I +LS      LP      
Sbjct: 190 KSEEEFIRINNKLRRGDIIGVQGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGL 246

Query: 120 YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
             +  R++ R+LDL  +   +   + R++II  +R  +    F+E  TP++        A
Sbjct: 247 KDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVA 306

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   
Sbjct: 307 KPFITYHNELDMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTC 364

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +  M++ +  D++   E ++ G+ +  +    V+ +
Sbjct: 365 EFYMAYADYHDLMEITEKMISGMVKHITGSYKVTYH 400



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 505 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDETFCTALE 564

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG   GIDR+ M L  + N++EV LFP  +
Sbjct: 565 YGLPPTGGWGMGIDRVTMFLTDSNNIKEVLLFPAMK 600


>gi|298709437|emb|CBJ31343.1| Aspartyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 614

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 74/362 (20%), Positives = 134/362 (37%), Gaps = 33/362 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH----YGITQVVANPDSACFEIAKS 64
            GDL  +  G  + L   VH  R     +FL +R           V  N      + A+ 
Sbjct: 153 VGDLTSAKAGEEIWLRARVHTSRSIKKGVFLVLRQALYTVQATVFVGGNVGRPMVQYAED 212

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE-- 122
           V  E V+ + G ++   +          ++EL  ++I ++S A+     +  +   P+  
Sbjct: 213 VSKESVIDVRGTLVVTPSPVSGCTQK--EVELKIEEIHVVSAADTFMPVIVADAMRPDRT 270

Query: 123 ------------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
                               R  YR++DLR          ++ +    R  + ++ F+E 
Sbjct: 271 PEEEEKQEKEGKAPTVAADTRLDYRWIDLRTPANQAIFKIQSAVCQYFRANLASKGFVEI 330

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA-SGFDRYFQIAPCFRDE 223
            +P L A + EG  +    +     +   L Q+PQ YKQ+  A  GF R  ++ P FR E
Sbjct: 331 HSPKLLAGASEGGSEVFTTNYFGTEA--CLAQSPQLYKQMAAACGGFGRVMEVGPVFRAE 388

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
             R+ R   EF  LD EM   E   ++L    ++   +F+E +         +R  +   
Sbjct: 389 KSRTHRHLCEFTGLDFEMVIKEHYFEVLEVFSDLFINIFDEVNRNCKEELEAVRTQHPFE 448

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
             RY      L     +  + +    ++       LS     ++  + A+  G +    D
Sbjct: 449 DLRYARPTLRLTFQEGIQLLIDAGYDADPL---GDLSTEHEKKLGDLVAEKYGTDFFMMD 505

Query: 343 RM 344
           + 
Sbjct: 506 KY 507



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/163 (25%), Positives = 62/163 (38%), Gaps = 24/163 (14%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMES 468
                D      ++LG +    +      DF   +      K      PF TMP      
Sbjct: 475 ADPLGDLSTEHEKKLGDLVAEKYG----TDFFMMD------KYPLDVRPFYTMPCPSNPK 524

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
                     +  +D+   G EI SG  R H  E + +      I  + + +       A
Sbjct: 525 ---------HSNSFDIFIRGEEIVSGAQRIHDLEFLKERAREHDIPLDSIMS----YLDA 571

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           F+ G  PHGG   G++R+VML LG KN+R+ S+FP     C  
Sbjct: 572 FKHGAEPHGGGGIGLERVVMLFLGLKNIRKTSMFPRDPKRCAP 614


>gi|154505525|ref|ZP_02042263.1| hypothetical protein RUMGNA_03062 [Ruminococcus gnavus ATCC 29149]
 gi|153794183|gb|EDN76603.1| hypothetical protein RUMGNA_03062 [Ruminococcus gnavus ATCC 29149]
          Length = 463

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 56/353 (15%), Positives = 114/353 (32%), Gaps = 51/353 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   V + GW+  +R      F+ + D       QVV +     F+          
Sbjct: 13  REQYLDKKVTVGGWIRSIRDSKTFGFIVVNDGSYFEPLQVVYHDKMENFDEISRQNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A ++ +   +     P+  +R   E +R     
Sbjct: 73  IIVTGTLVATPQ-------AKQPFEIQADEVTVEGASAPDY-PLQKKRHSFEYLR-TISH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +T       R+ I  ++        F+   TP++T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSMIAYAIHQFFQERGFVYVHTPLITGSDCEGAGEMFQVTTLDLKD 183

Query: 191 --------------FYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 VPKSADGSIDYSKDFFGKETNLTVSGQLNGETFAQAFRSIYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F + +D ++  E++L+ V            NF                   
Sbjct: 244 FWMIEPEIAFADLEDNMDLAESMLKYVISYVLENAPEEMNFFNSFVDKGLLDRLNNVVNS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
              R+ Y +A+     +       +       TEH  +    ++ + + V   
Sbjct: 304 DFARVTYTEAVDILMKNNDKFEYKVSWGTDLQTEHERYLTEEIYKRPVFVTDY 356



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 53/150 (35%), Gaps = 24/150 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +         ++ D+P     +E K        F M Q        ND     A  
Sbjct: 338 HERYLTEEIYKRPVFVTDYP-----KEIK-------AFYMKQ--------NDDGKTVAAV 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    E +    + + ++    E  +       + G   H G   
Sbjct: 378 DCLVPGIGEIIGGSQREDDFEKLRTRMAEMDLN----EEDYKFYLDLRKYGSTRHAGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R VM L G  N+R+V  FP + N CDL
Sbjct: 434 GFERCVMYLTGMSNIRDVIPFPRTVNNCDL 463


>gi|261344270|ref|ZP_05971914.1| asparagine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282567872|gb|EFB73407.1| asparagine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 466

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 124/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VG+ V + GWV   R    G  FL + D      + A  ++        V    +    G
Sbjct: 16  VGTEVTVQGWVRTRRDSKAGFSFLAVYDGSCFNPLQAIINNNLPNYNDEV----LHLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  +     +       EL A  I+++   E+        + +      +   L  R 
Sbjct: 72  CSVEVTGVVAESQGQGQSFELQATAIKVVGWVEDPDTYPMAPKRHSVEFLREAAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDYNNLPRTD 191

Query: 190 --------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      A+   + +   P FR E+  + R   EF+ L+
Sbjct: 192 KGEVDFSQDFFGREAFLTVSGQLNGEAYATALSKVYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            E++F   DDI    E +L+  F+           F                      ++
Sbjct: 252 PEVAFANLDDIAGLAEKMLKYAFKAALTERRDDLEFFAERVDKDVIDRLERFVNSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA++   T      NP+    ++ +EH  +   + F   + V    +          
Sbjct: 312 DYTDAVKILETCGQKFENPVYWGVDLSSEHERYLAEQHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +++      +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDMLDARLEEMGMNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+V  + G  NVREV  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLVAYVTGVGNVREVIAFPRTPR 462


>gi|262275965|ref|ZP_06053774.1| asparaginyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262219773|gb|EEY71089.1| asparaginyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 469

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 67/389 (17%), Positives = 125/389 (32%), Gaps = 50/389 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G + V + V + GW+   R    GI FL I D      + A   +      + V    + 
Sbjct: 15  GKAAVDTEVTVRGWIRTRRDSKAGISFLAIYDGSCFDPIQAVVPNELNNYQEEV----LR 70

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  + + + +       EL A  ++++   E+       +  +      +   L
Sbjct: 71  LTTGCSVEVTGKVVESPGQGQAYELQATDVKVVGWVEDAETYPMAKTRHSIEYLREVAHL 130

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--- 188
             R + +      R  +  ++        +   S P++TAS  EGA +    S ++    
Sbjct: 131 RPRTNVIGAVARVRNCLAQAIHRFYHENGYYWVSAPLITASDAEGAGEMFRVSTLDMENL 190

Query: 189 -----------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q      A    + +   P FR E+  + R   EF
Sbjct: 191 PRTEKGDVDYSEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEF 250

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNN 273
           + ++ E++F E DD+    E++L+ VF+                            V ++
Sbjct: 251 WMVEPEVAFAELDDVAKLAEDMLKYVFKAVLEERRDDMEFFAQRIDKDVISRLEKFVESD 310

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           F ++ Y DAI            P+   +   +EH  +     F   + V    +      
Sbjct: 311 FAQVDYTDAIDILLKSGKKFEFPVEWGIDLASEHERYLAEEHFKAPVIVKNYPKDI---- 366

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 367 -KAFYMRLNDDGKTVAAMDVLAPGIGEII 394


>gi|255732768|ref|XP_002551307.1| lysyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240131048|gb|EER30609.1| lysyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 595

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 54/298 (18%), Positives = 109/298 (36%), Gaps = 12/298 (4%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
            V +SG +   R  G  + F  ++ D   +  +    D+   E  + +           V
Sbjct: 125 TVNVSGRIMTKRESGSKLKFYVLKGDGIEVQIMAQAQDAESLEAFEKMHEMLKRGDIIGV 184

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                 T  A    G++ + A+ +++L+      LP        +  R++ R+LDL  + 
Sbjct: 185 TGYPGRTSPAKGGEGELSVYARTVQLLTPCL-HMLPTEHYGFKDQEARYRKRYLDLIMND 243

Query: 138 LHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
             +   + R++II  +R  +   +F+E  TPIL   +        +    +      +  
Sbjct: 244 SSRERFRVRSKIIQYIRKFLDNRDFVEVETPILNVIAGGATAKPFITHHNDLNMEMFMRI 303

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + + L+  G +R ++I   FR+E       P EF   +   ++ +  D+++  E +
Sbjct: 304 APELFLKELVVGGMERVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDMTELM 362

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
              + +E +           I Y            D   P    N+ E         F
Sbjct: 363 FSEMVKEITGDYV-------IKYHPEGPNGKEMTLDFSRPWKRINMIEELEKVYNVKF 413


>gi|319952351|ref|YP_004163618.1| lysyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421011|gb|ADV48120.1| Lysyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 563

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 58/258 (22%), Positives = 105/258 (40%), Gaps = 11/258 (4%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G + R +  G   F  ++D  G  Q+  N D  C E   S  +E    +  L 
Sbjct: 46  GKKVIVAGRLMRKKIQGKASFAALQDSEGRVQLYFNRDEICTEDDHSKYNEIFKKLTDLG 105

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-------GEREYPESIRFKYRF 130
                E        G+  +  +   IL  A                +      +R++ R+
Sbjct: 106 DIIGVEGELFTTQVGEKTVLVKDFTILCKALRPLPLPKVDPDGKVHDEFNDPELRYRQRY 165

Query: 131 LDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           +DL  +  + +  +KRT+I NS+R       ++E  TPIL        AR FL       
Sbjct: 166 VDLIVNPSVKQTFIKRTKITNSIRQFFNDREYLEVETPILQPIPGGASARPFLTHHNALN 225

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ + + 
Sbjct: 226 IPLY-LRVANELYLKRLIVGGFDGVYEFSKDFRNEGMDRTHNP-EFTVMELYVAYKDYNW 283

Query: 249 ILNTMENVLRGVFEEFSN 266
           +++  E +L  V  + + 
Sbjct: 284 MMDMTEQLLEKVAVDANG 301



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+ NG E+A+     + +    + F
Sbjct: 373 EHLYIQPTFITDYPKEMSPLTKQHRDNPALTERFELMVNGKELANCYSELNDAIDQRERF 432

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                     ++          RA + GMPP  GI  GIDR+VML+    +++EV  FP 
Sbjct: 433 EEQLKLSAKGDDEAMFIDQDFIRALEYGMPPTAGIGIGIDRLVMLMTNNSSIQEVLFFPQ 492

Query: 565 SQ 566
            +
Sbjct: 493 MR 494


>gi|296110412|ref|YP_003620793.1| asparagine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295831943|gb|ADG39824.1| asparagine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 444

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 69/307 (22%), Positives = 121/307 (39%), Gaps = 32/307 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCI 73
           VG  V++  W+ + R  G + FL +RD           A+     F++AK ++ E  + +
Sbjct: 26  VGQTVKIGAWLRQKRGSGKLAFLQLRDGSAFFQAVVAKADVSDTLFDLAKGLKQETSIYV 85

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +   +  +          E++   IEI+  + + P+     +E+     F  R L L
Sbjct: 86  TGEIHEDTRSSF-------GYEMAVSGIEIIGESHDYPITP---KEHGTEFLFDERHLYL 135

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R  +I +       E F +  +P+LT S+PEG  D        + +F  
Sbjct: 136 RHLKPFATLKIRNTLIAATYEFFNREGFTKLDSPLLTGSAPEGTTDLFETDYFGEPAF-- 193

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q+  L   
Sbjct: 194 LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAFMHQEQSLEVQ 252

Query: 254 ENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           E  +  +  +    N                     + R+ YDDAI+    +  D+   +
Sbjct: 253 ERYISFLISKVLENNEQELDILERDKDLLRSYTELPYPRVSYDDAIKLLQDNGFDVEWGV 312

Query: 298 IMHNVTE 304
              +  E
Sbjct: 313 DFGSPEE 319



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 46/136 (33%), Gaps = 22/136 (16%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +I++FP     +  K      +P          L   +                EI 
Sbjct: 328 KPVFIVNFP-----KAIKAFYMKRHPTRQDVVISADLLAPE-------------GYGEII 369

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R+   + + Q     G+S       +       + G  PH G   G++R+V  + G
Sbjct: 370 GGSERDTDYDYLKQRIEAEGLSL----EEYNWYLDLRRFGSVPHSGFGLGLERMVTFVTG 425

Query: 553 AKNVREVSLFPMSQNF 568
            +++RE   FP   N 
Sbjct: 426 EEHIREAIPFPRMTNR 441


>gi|255532907|ref|YP_003093279.1| asparaginyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255345891|gb|ACU05217.1| asparaginyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 482

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 58/291 (19%), Positives = 117/291 (40%), Gaps = 30/291 (10%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEI 61
           +R      L   +    V + GWV   R +    F+ I D   +   QVV + +     +
Sbjct: 3   HREKVKSLLETEEFNREVTVMGWVRTFRNNQ---FIAINDGSCMGNIQVVVDFNHTDEAL 59

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K + +   + ++G+++    +         ++++ A  IEIL  ++    P+  ++   
Sbjct: 60  LKRITTGAAIAVNGIIVESVGKG-------QRVDIKATSIEILGDSDPEKFPLQPKKHSL 112

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +   L  R +T +     R  +  ++        F+   TPI+TAS  EGA +  
Sbjct: 113 EFLR-EIAHLRFRTNTFNAIFKVRHALAFAIHQFYNERGFVYMHTPIITASDAEGAGEMF 171

Query: 182 VPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             + ++                 F+A         Q +  L A  F + +   P FR E+
Sbjct: 172 RVTTLDLENPPRTEDGKVDFSEDFFARSTNLTVSGQLEGELAAMAFGQIYTFGPTFRAEN 231

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
             + R   EF+ ++ E++F + +D +   E++L+ V     +      +FL
Sbjct: 232 SNTTRHLAEFWMVEPEVAFADLEDNMQLAEDMLKYVIRYALDNCATEIDFL 282



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 48/146 (32%), Gaps = 20/146 (13%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +  +   + D+P                 F M Q   + +    + ++    
Sbjct: 353 HERYLVEKHFKKPVILTDYP------------ADIKSFYMRQNEPDEVGRKTVAAMDI-- 398

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     E+  G  R    + ++     + I     +          + G  PH G   
Sbjct: 399 --LFPGIGEMVGGSQREERMDKLVARMEELNIP----QEELWWFLDTRRFGSAPHSGFGL 452

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+V+ + G  N+R+V  FP    
Sbjct: 453 GFERLVLFVSGMTNIRDVIAFPRFPK 478


>gi|167764830|ref|ZP_02436951.1| hypothetical protein BACSTE_03221 [Bacteroides stercoris ATCC
           43183]
 gi|167697499|gb|EDS14078.1| hypothetical protein BACSTE_03221 [Bacteroides stercoris ATCC
           43183]
          Length = 574

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 57/272 (20%), Positives = 112/272 (41%), Gaps = 10/272 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV    D  C    K + +     +  L    
Sbjct: 55  VSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPGEDKEMYNTVFKRLLDLGDFI 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFLDLR 134
             E        G+I + AQK+ +L+ + +    V  +            +R++ R++DL 
Sbjct: 115 GIEGFVFRTQMGEISIHAQKLTVLAKSIKPLPIVKYKDGVAYDSFDDPELRYRQRYVDLI 174

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +  + +  +KR  II +MR  +    + E  TPIL +      AR F+          Y
Sbjct: 175 VNDGVKETFLKRATIIKTMRAVLDEAGYTEVETPILQSIPGGASARPFITHHNSLDMDLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ + + + + ++  
Sbjct: 235 -LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-EFTCMELYVQYKDYNWMMGF 292

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            E +L  +    +     + +   I +    R
Sbjct: 293 TEKLLERICIAVNGSTETTIDGKTISFKAPYR 324



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 85/259 (32%), Gaps = 45/259 (17%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGD 405
           W     +  L  I   ++ S      G             I   +  + G D       +
Sbjct: 288 WMMGFTEKLLERICIAVNGSTETTIDGKTISFKAPYRRLPILDAIKEKTGYDLNGKSEEE 347

Query: 406 PLKFCSFAADARNHIAQELG---IINCNCFEFC--------WIMDFPFYEWNEEEKKIDF 454
             + C    + +  I   +G   +I+    EFC        +I D+P             
Sbjct: 348 IRQVCR---ELKMEIDDTMGKGKLIDEIFGEFCEGTFIQPTFITDYP------------V 392

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             +P T        L           +++L+ NG E+A+     +      + F      
Sbjct: 393 EMSPLTKMHRSKPGL---------TERFELMVNGKELANAYSELNDPIDQEERFKEQLKL 443

Query: 515 KEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            E  ++          +A Q GMPP  GI  GIDR+ ML+ G   ++EV  FP  +    
Sbjct: 444 SEKGDDEAMFIDQDFLKALQYGMPPTSGIGIGIDRLTMLMTGQAFIQEVLFFPQMRPEKV 503

Query: 571 LLMGSPSTVSVEQLRELGL 589
               +P+        ELG+
Sbjct: 504 TPKDAPAK-----FMELGI 517


>gi|238754326|ref|ZP_04615682.1| Asparaginyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238707359|gb|EEP99720.1| Asparaginyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 466

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 67/424 (15%), Positives = 137/424 (32%), Gaps = 50/424 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSE 68
           G + V S V + GWV   R    GI F+ + D      + A  ++      +    + + 
Sbjct: 12  GRAAVDSEVTVRGWVRTRRDSKAGISFVAVYDGSCFDPLQAVINNTLPNYQDEVLHLTTG 71

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + I G V++   E  +        E+ A ++ ++   ++        + +      + 
Sbjct: 72  CSVEITGTVVASPGEGQS-------FEIQATRVNVVGWVDDPDTYPMAAKRHSIEYLREV 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R + +      R  +  ++        +   STP++TAS  EGA +    S ++ 
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 189 --------------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+   A      Q      A    + +   P FR E+  + R  
Sbjct: 185 ENLPRTDAGKIDFSEDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHL 244

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTD 289
            EF+ ++ E++F   DD+    E +L+ VF+   +       F   R+  D   R     
Sbjct: 245 AEFWMIEPEVAFASLDDVAALAEKMLKYVFQAVLDERADDLAFFAQRVDKDAIDRLQRFV 304

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKI------------LSVNPGYEVWAIPAKGGGGN 337
             D    +   +  +  + S     + +                  ++   +        
Sbjct: 305 TSDFAQ-VDYTDAIDILIASGQTFENDVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI 363

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           +AF  RMNE        G       +   G    +G   +   +   +     + +   D
Sbjct: 364 KAFYMRMNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDQRLAEMGLNKED 416

Query: 398 SCFF 401
             ++
Sbjct: 417 YWWY 420



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 45/120 (37%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    +V+ Q 
Sbjct: 347 EKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDQR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + +G++K      +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 407 LAEMGLNK----EDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|95930303|ref|ZP_01313040.1| asparaginyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133555|gb|EAT15217.1| asparaginyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 457

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 125/375 (33%), Gaps = 49/375 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L        V + GWV  +R    + F+++ D      +    D      A+        
Sbjct: 7   LAAEAPQQNVEVRGWVRTLRASKEVCFIELNDGSCFASLQLVADRTVDNFAELA-----H 61

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  S   +++     + EL   ++ ++  A+    P+  +R   E +R     L
Sbjct: 62  IGTGACIKASGNLVDSPAKGQRWELHVSELTVIGNADP-SYPLQKKRHTFEYLR-SIAHL 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--- 188
             R +T       R  +  ++       +F+   TPI+TAS  EGA +    + ++    
Sbjct: 120 RPRSNTFGAVFRLRNALSYAVHQFFQQRDFLYVHTPIITASDCEGAGELFRVTTLDPANP 179

Query: 189 ----------GSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q +  L A+ F   +   P FR E+  + R   EF+
Sbjct: 180 PKNNGRIDWQKDFFGARTGLTVSGQLQGELFATAFSDIYTFGPTFRAENSNTSRHASEFW 239

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-------------------- 275
            ++ E++F    D     E+ LR + +           F                     
Sbjct: 240 MIEPEIAFANLADDCQLAEDFLRYLVKYALEHCAEDLQFFNDRIEKGLLDKLTALADATF 299

Query: 276 -RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSV---NPGYEVWAI 329
             + Y +AI +      +   P+   +   +EH  +   +V +  L V       + + +
Sbjct: 300 STMTYTEAIEQLKNSGQNFEFPVEWGLDLQSEHERYLCEQVVNGPLFVTDYPKEIKAFYM 359

Query: 330 PAKGGGGNRAFCDRM 344
            A   G   A  D +
Sbjct: 360 RANEDGKTVAAMDLL 374



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 43/130 (33%), Gaps = 17/130 (13%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           +++ P +  +            F M                 A    LV    EI  G  
Sbjct: 340 VVNGPLFVTD-----YPKEIKAFYMRANED--------GKTVAAMDLLVPRVGEIIGGSQ 386

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R    +V+      + ++               + G  PH G   G +R++M L G +N+
Sbjct: 387 REERLDVLTARMEELDMAP----ESLDWYLDIRRWGSCPHAGFGLGFERLIMYLSGMENI 442

Query: 557 REVSLFPMSQ 566
           R+V  FP + 
Sbjct: 443 RDVIPFPRTP 452


>gi|302348258|ref|YP_003815896.1| Aspartyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328670|gb|ADL18865.1| Aspartyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 464

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 74/254 (29%), Positives = 126/254 (49%), Gaps = 15/254 (5%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVL 71
           S +G  +R+ GWV  +R  GG+ F+ +RD  G+ QVV           E +K +  E V 
Sbjct: 38  SLLGQKIRVCGWVDNIRDLGGVRFVLLRDRSGVLQVVIKKGVTPETAIETSKELVKETVA 97

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRF 130
           C +G ++   ++         + EL A  I++LS   E +PL      E   ++R  YR+
Sbjct: 98  CFEGTLVESKSKL--------KYELQASGIQVLSKPVEPIPLEPATSTEAQLNVRLDYRW 149

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LD+R   +       + + N  R       F+E  TP + A+  EG  +        + +
Sbjct: 150 LDVRNLKVSAIFQFESWVANKFREFFRQNGFVEVFTPKIVAAGTEGGAEVFPVIYFGREA 209

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDI 249
           + A  Q+PQ YKQ+ + +G +R F++ P FR E   + +   EF+ LD+EM F+E  +D+
Sbjct: 210 YLA--QSPQFYKQMAVIAGLERVFEVGPVFRAEAHHTVKHLTEFHGLDIEMGFIEGPEDV 267

Query: 250 LNTMENVLRGVFEE 263
           +N +E+  R + +E
Sbjct: 268 MNMLESFFRYLAKE 281



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 60/153 (39%), Gaps = 28/153 (18%)

Query: 422 QELGIINCNCFE--FCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIK 478
           +ELG      ++  F ++ ++P+               PF TM +               
Sbjct: 337 RELGDYALKEYDSDFIFVTEYPW------------KVRPFYTMRKPQEPEW--------- 375

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EIA+G  R H  + +L    + G++      RF      F+ G PPHGG
Sbjct: 376 TLGFDLLFRGLEIATGSQREHRYDQLLANLRDKGLNP----ERFQFYLNFFKYGAPPHGG 431

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
              G++RIV   L   NVRE  L P        
Sbjct: 432 AGLGLERIVKQFLNLDNVREARLLPRDPERLTP 464


>gi|282163156|ref|YP_003355541.1| asparaginyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155470|dbj|BAI60558.1| asparaginyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 431

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 77/338 (22%), Positives = 141/338 (41%), Gaps = 34/338 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---IAKSVRSEWVLCID 74
           G  V + GWV + R  G I+F  IRD  G  QV A   + C E   +A ++  E  + + 
Sbjct: 16  GEEVEVGGWVVKNRSSGKIVFTLIRDATGEMQVTARKGNVCDEALKVADALSLECSIIVK 75

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V S            G  ELSA  ++++  + +   P+FGE E+   +    R LD+R
Sbjct: 76  GKVRSDPR-------APGGKELSATDLKLIGASRDY--PIFGEEEHNPEVLLDLRHLDVR 126

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
              L   +  +  ++++ R       F E + PI+ +S+ EG             ++  L
Sbjct: 127 SKQLVAIMKVKDSVLSAAREWFRNHEFFEVTPPIIISSACEGGSTLFELKYFEDKAY--L 184

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y + L+  G ++ + I P FR E  R+ R   E++ ++ EM+++   ++++ +E
Sbjct: 185 SQSAQLYLESLIF-GLEKVYSITPSFRAEKSRTTRHLAEYWHIEGEMAWMGLYEMIDMLE 243

Query: 255 NVLRGVFEEFSN---------------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            ++  V                        +   F RI YD+A++    D  + +     
Sbjct: 244 QLVCYVCNRVGEERAEEIRLVGGDPEYFKGLKAPFPRITYDEAVKVLQADGFEFKPGEDF 303

Query: 300 --HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
             H   +   H +  +F  I       + + +   G G
Sbjct: 304 GTHEERQLSTHYDKPLF--ITEYPAEVKAFYMKDAGNG 339



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 43/127 (33%), Gaps = 17/127 (13%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D P +       +       F M   G   +   D+++ K F         EI     R 
Sbjct: 316 DKPLF-----ITEYPAEVKAFYMKDAGNGKVLNVDMIAPKGFG--------EIIGASERE 362

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
               ++ +     G        ++       + G  PH G   G +R+V  + G +++R+
Sbjct: 363 TDLAILEERIRKQGEDP----AKYAWYLDLRRYGSVPHSGFGMGTERLVRWICGLEHIRD 418

Query: 559 VSLFPMS 565
              +P +
Sbjct: 419 TIPYPRT 425


>gi|302345761|ref|YP_003814114.1| lysine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302149924|gb|ADK96186.1| lysine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 578

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 62/302 (20%), Positives = 120/302 (39%), Gaps = 29/302 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS--EWVLCIDGL 76
             V ++G +   R  G   F +++D  G  QV    D  C    K   +     L   G 
Sbjct: 52  REVVIAGRMMGRRVMGKASFAELQDSKGRIQVYITRDDICPGEDKEFYNKVFKKLLDIGD 111

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFKYRF 130
            +    E     +  G+I + A++I +LS + +    V  +      +      R++ R+
Sbjct: 112 FIGVKGEVFKTQM--GEISVHAKEITVLSKSLKPLPVVKYKDGEAYDKFEDPEQRYRQRY 169

Query: 131 LDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQ 188
           +DL  +  +    +KR  ++ +MR       + E  TP L + +    AR F+       
Sbjct: 170 VDLVVNEGVKDTFLKRAIVLRTMRKFFDEAGYTEVETPTLQSIAGGASARPFITHFNALN 229

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + 
Sbjct: 230 VDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRFHNP-EFTCMELYVQYKDYNW 287

Query: 249 ILNTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRR------YGTDKPDL 293
           +++  E +L  +  E +                 F R+   DAI+       YG  + ++
Sbjct: 288 MMSFTEKLLEKICIEVNGKPEVQVGDKVISFKAPFRRLPILDAIKEKTGFDLYGKTEEEI 347

Query: 294 RN 295
           RN
Sbjct: 348 RN 349



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 9/145 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+A+     +      + F
Sbjct: 379 EGTYIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERF 438

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  +  ++          R+ Q GMPP  GI  GIDR+VML+ G + ++EV LFP 
Sbjct: 439 VEQMRLADKGDDEAMIIDQDFLRSLQYGMPPTSGIGIGIDRLVMLMTGKEYIQEVLLFPQ 498

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGL 589
            +         P + SV++  ELG+
Sbjct: 499 MK----PEPKIPQS-SVKEWAELGV 518


>gi|73956988|ref|XP_536777.2| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 1 [Canis familiaris]
          Length = 597

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 59/276 (21%), Positives = 116/276 (42%), Gaps = 15/276 (5%)

Query: 6   THSCGDLGVSDVGS-----FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           TH   + G    G       ++++G +H  R  G  +IF D+R      QV+AN  S  +
Sbjct: 106 THFIEEYGHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNY 163

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  +           G ++             G++ +   +I +LS      LP      
Sbjct: 164 KSEEEFIHINNKLRRGDIIGVKGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGL 220

Query: 120 YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
             +  R++ R+LDL  +   +   + R++II  +R  +    F+E  TP++        A
Sbjct: 221 KDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVA 280

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   
Sbjct: 281 KPFITYHNELDMNLY-MRIAPELYHKILVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTC 338

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +  M++ +  D++   E ++ G+ +  +    V+ +
Sbjct: 339 EFYMAYADYHDLMEITEKMISGMVKHITGSYKVTYH 374



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 479 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 538

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 539 YGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFPAMK 574


>gi|329770483|ref|ZP_08261861.1| asparaginyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328836232|gb|EGF85901.1| asparaginyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 428

 Score =  180 bits (456), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 84/343 (24%), Positives = 128/343 (37%), Gaps = 36/343 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWV 70
              +G  V L  W+   R  G I F  +R   G  Q VA  +S   E  + +R    E  
Sbjct: 7   KEQLGKTVTLGAWIANKRSSGKIAFFQLRYGTGFIQAVALKESLGEERYQQLRHLPQESS 66

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + GLV     E          IEL  Q  E++S A + P+     +E+        R 
Sbjct: 67  IKVTGLVKENDRELS-------GIELEIQDFEVVSEAIDYPITP---KEHGVEFLADNRH 116

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           + +R    H  +  R +II S       E FI+   PILT+S+PEG  +       ++ +
Sbjct: 117 IWIRSKKQHAILTIRNQIIKSTYDFFEKEGFIKTDPPILTSSAPEGTTELFNTKYFDEEA 176

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +      F + F   P FR E  ++ R   EF+ ++ EM+F   D+ L
Sbjct: 177 Y--LSQSGQLYLE-ATVMSFGKVFSFGPTFRAEKSKTRRHLIEFWMIEAEMAFCNHDESL 233

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAI---RRYGTDKPD 292
              E  +  +  E                         F RI Y DAI   +  G D  +
Sbjct: 234 AIQEAYVNYLLTEVIEKCQEQLKILGRDLESLNAARGEFPRIKYKDAIKLLKDNGFDDIE 293

Query: 293 LRNPIIMHNVTEHFVHSEFRVF--SKILSVNPGYEVWAIPAKG 333
             +     + T         VF     L + P Y +      G
Sbjct: 294 YGDDFGSPHETFIANSYNKPVFITHWPLDIKPFYMIEDPNEPG 336



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 53/182 (29%), Gaps = 27/182 (14%)

Query: 388 RVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-----IINCNCFEFCWIMDFPF 442
              L+   G+       D +K              + G      I  +  +  +I  +P 
Sbjct: 262 LESLNAARGEFPRIKYKDAIKLLKDNGFDDIEYGDDFGSPHETFIANSYNKPVFITHWPL 321

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
                          PF M +   E         I    Y       EI  G  R    +
Sbjct: 322 ------------DIKPFYMIEDPNEPGVVLCADLIAPEGY------GEIIGGSQRIDDYD 363

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +L+      ++     + +G      + G   H G   G++R V  + G  +VRE   F
Sbjct: 364 KLLENIKKHDLNL----DAYGWYLDLRKYGSVEHSGFGLGLERTVAWITGNGHVRETVPF 419

Query: 563 PM 564
           P 
Sbjct: 420 PR 421


>gi|190348970|gb|EDK41531.2| asparaginyl-tRNA synthetase [Meyerozyma guilliermondii ATCC 6260]
          Length = 544

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 71/345 (20%), Positives = 132/345 (38%), Gaps = 27/345 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            ++GS V + GW+HR+R   G+ F+ +RD  G  Q V   D A  +    +  E  +CI 
Sbjct: 116 ENIGSRVAVRGWIHRLRLQKGLGFVTVRDGTGYVQCVLTGDLAKAKSTHELTLETSICIK 175

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--REYPESIRFKYRFLD 132
           G++              G +EL A   E++  A         +       S+    R L 
Sbjct: 176 GVINKLPEG----KSAPGGVELKADFYEVVGQAPSGEESFSNKVQENADPSLLLDQRHLT 231

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR + L   +  R+  + ++R     E  +E + P +  +  EG       +   + ++ 
Sbjct: 232 LRGEALSAVMKVRSAFLYAIRRFFEEEGLLEVTPPCMVQTQVEGGSTLFKMNYYGEDAY- 290

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL-- 250
            L Q+ Q Y +  + S     F +   FR E   + R   E+  ++ E++F++ +D+L  
Sbjct: 291 -LTQSSQLYLETCLPS-LGDVFCVQESFRAEKSHTRRHLSEYTHIEGELAFIDFEDLLVH 348

Query: 251 --NTMENVLRGVFEEFS----------NGNTVSNNFLRICYDDAIRR---YGTDKPDLRN 295
               +   ++ V E+            N       FLR+ Y DA+     +G    D   
Sbjct: 349 LEKLLTQTVKYVLEDPVAGPLIKQLNPNFVAPKGPFLRMEYVDALEWLNEHGIPNEDGEK 408

Query: 296 PIIMHNVTE-HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
                ++ E         +   IL +    E+ +   +    +R 
Sbjct: 409 FKFGDDIAEAAERKMTDTIGKPILLIRFPVEIKSFYMQKCADDRR 453



 Score = 60.9 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R +  + ++ +   
Sbjct: 435 RFPVEIKSFYMQKCADDRRVTESVDV-------LMPNVGEILGGSMRMYDYDELVASIKK 487

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+      + +       + G  PHGG   G +RI+  L     VR+ SL+P     C 
Sbjct: 488 EGLDL----DSYYWFTDLRKYGTCPHGGYGLGTERILAWLCDRFTVRDCSLYPRFSGRCK 543

Query: 571 L 571
            
Sbjct: 544 P 544


>gi|303233935|ref|ZP_07320584.1| asparagine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302494860|gb|EFL54617.1| asparagine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 461

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 66/382 (17%), Positives = 129/382 (33%), Gaps = 56/382 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75
              V + GW+   R    + F+++ D      V      D+  FE ++ ++    + + G
Sbjct: 16  DKEVEVGGWIKNSRFSKNVGFIELNDGTFFNPVQIVVGKDNEDFEKSEKLKLSSAIIVVG 75

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++       N+       E+ A K+ +   +     P+  +R   E +R     L  R 
Sbjct: 76  KLVLTP----NSKQP---FEIQASKVIVEGES-TDDYPLQKKRHTFEFLR-TILHLRPRT 126

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           +T +     R+R+  ++        F+   TPI+T S  EGA +    + ++        
Sbjct: 127 NTFNAVFRVRSRLAFAIHKFFNERGFVYVHTPIITGSDAEGAGEMFRVTTLDLDNLPKDD 186

Query: 190 --------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F++         Q +    A  F   +   P FR E   + R   EF+ ++
Sbjct: 187 NGNIDFSQDFFSKSTNLTVSGQLQAEAYALAFRNVYTFGPTFRSEHSNTPRHAAEFWMME 246

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRI 277
            E+ F + DD+ +  E+++R + ++                              +F ++
Sbjct: 247 PEICFADLDDVCSLAEDMVRYIIKDVMENCEEEIKFFNSFVDKNLIERLTKVANKSFKKL 306

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y +AI            P+   M   TEH  +   +V        P +           
Sbjct: 307 TYTEAIDILQKSGEKFEYPVEWGMDLQTEHEKYLSEKVVD-----GPVFVTDYPKEIKAF 361

Query: 336 GNRAFCDRMNEWARSQGQPGLA 357
             R   D+    A     PG+ 
Sbjct: 362 YMRLNDDKKTVAATDLLVPGIG 383



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 71/212 (33%), Gaps = 27/212 (12%)

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-- 415
           YI   + E+        +    + V+   I     + +         + +     + +  
Sbjct: 267 YIIKDVMENCEEE----IKFFNSFVDKNLIERLTKVANKSFKKLTYTEAIDILQKSGEKF 322

Query: 416 -ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
                   +L       +    ++D P +  +            F M          +D 
Sbjct: 323 EYPVEWGMDL-QTEHEKYLSEKVVDGPVFVTD-----YPKEIKAFYMR-------LNDDK 369

Query: 475 LSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
            ++ A   DL+  G  E+  G  R    E++ Q    +G +KE  +          + G 
Sbjct: 370 KTVAAT--DLLVPGIGELIGGSQREERFELLDQKMDELGFNKEEYK----WYLDLRKYGG 423

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             HGG   G +R+VM + G  N+R+V  FP +
Sbjct: 424 VKHGGFGLGFERMVMYMTGMSNIRDVIPFPRT 455


>gi|302876675|ref|YP_003845308.1| asparaginyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307687350|ref|ZP_07629796.1| asparaginyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302579532|gb|ADL53544.1| asparaginyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 463

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 127/385 (32%), Gaps = 56/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
              +R+SGWV  +R +    F+++ D       QVV   +   F+    +     L I+G
Sbjct: 18  DKKIRISGWVRTIRANNNFGFIELNDGSFFKSVQVVFENNLENFKEVSKLAISASLEIEG 77

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++                E+ A+ I I   +     P+  +R   E +R     L  R 
Sbjct: 78  TLVLTPE-------AKQPFEVKAESIMIHGNSHSDY-PLQKKRHTMEYLR-TIAHLRPRS 128

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           +T       R+    ++        F+   TPI+T S  EGA +    + ++        
Sbjct: 129 NTFSAVFRVRSLAAYAIHKFFQERGFVYVHTPIITGSDCEGAGEMFKVTTLDFDNVKKTE 188

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                 Q  F+          Q      A  F   +   P FR E+  + R   EF+ ++
Sbjct: 189 EGKIDYQDDFFGRETNLTVSGQLSAETFALAFRDVYTFGPTFRAENSNTTRHAAEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            EM+F E  D ++T E++++ +             F                      R+
Sbjct: 249 PEMAFAELKDYMDTAEDMIKYIISYVMENAPEEMEFFSNFVDKGLKERLDNVVNSEFGRV 308

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y +A+        + + P+   +   TEH  +    VF +     P +           
Sbjct: 309 SYTEAVDILQKSGVEFQYPVQWGIDLQTEHERYLSEVVFKR-----PVFVTDYPKEIKAF 363

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 364 YMRINDDGKTVAAADLLAPGIGEII 388



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 52/139 (37%), Gaps = 26/139 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              ++ D+P     +E K        F M          ND     A   DL+  G  EI
Sbjct: 349 RPVFVTDYP-----KEIK-------AFYMRI--------NDDGKTVAAA-DLLAPGIGEI 387

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    +++    + +G++K      +       + G   H G   G +RI+M L 
Sbjct: 388 IGGSQREERLDILEARLAELGLNK----EDYWWYLELRKYGETKHAGFGLGFERILMYLT 443

Query: 552 GAKNVREVSLFPMSQNFCD 570
           G  N+R+V  FP +    +
Sbjct: 444 GMSNIRDVIPFPRTTGSAE 462


>gi|327291844|ref|XP_003230630.1| PREDICTED: lysyl-tRNA synthetase-like [Anolis carolinensis]
          Length = 600

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 59/259 (22%), Positives = 112/259 (43%), Gaps = 10/259 (3%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V+++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G 
Sbjct: 130 GVTVKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEYVHINNKLRRGD 187

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++             G++ +   ++ +LS      LP        +  RF+ R+LDL  +
Sbjct: 188 IVGIQGNP--GKTKKGELSIIPYEMTLLSPCL-HMLPHLHFGLKDKETRFRQRYLDLILN 244

Query: 137 TLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYAL 194
              +   + R +II  +R  +    F+E  TP++        A+ F+        + Y +
Sbjct: 245 DFVRQKFIVRAKIITYVRTFLDELGFLEVETPMMNVIPGGAVAKPFITHHNELDMNLY-M 303

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E
Sbjct: 304 RVAPELYHKMLVVGGMDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITE 362

Query: 255 NVLRGVFEEFSNGNTVSNN 273
            +L G+ +  + G  V+ +
Sbjct: 363 QLLSGMVKRITGGYKVTYH 381



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F +   +K   ++           A +
Sbjct: 486 RQGLTERFELFVMRKEICNAYTELNDPFRQHQLFEDQAKAKADGDDEAMFIDENFCTALE 545

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ---NFCDLLMGSPST 578
            G+PP  G   GIDR+ M L  + N++EV LFP  +      D L   P  
Sbjct: 546 YGLPPTAGWGMGIDRLAMFLTDSNNIKEVLLFPAMKPEEKKKDPLSKPPGE 596


>gi|55741637|ref|NP_001006968.1| lysyl-tRNA synthetase [Rattus norvegicus]
 gi|53733461|gb|AAH83652.1| Lysyl-tRNA synthetase [Rattus norvegicus]
 gi|149038242|gb|EDL92602.1| lysyl-tRNA synthetase, isoform CRA_b [Rattus norvegicus]
          Length = 626

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 60/287 (20%), Positives = 117/287 (40%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 156 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFVHINNKLRRGDIIGV 213

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E        G++ +  +++ +LS      LP        +  R++ R+LDL  +   +
Sbjct: 214 --EGNPGKTKKGELSIVPREMTLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 270

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 271 QKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 329

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E +L 
Sbjct: 330 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMLS 388

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+    +          +I Y          + D   P    ++ E 
Sbjct: 389 GMVRSITGSY-------KITYHPDGPEGQAYEIDFTPPFRRISMVEE 428



 Score = 77.4 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 508 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 567

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 568 YGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFPAMK 603


>gi|332230291|ref|XP_003264323.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic [Nomascus
           leucogenys]
          Length = 548

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 70/344 (20%), Positives = 126/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V   +         + +E  + + G+
Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGM 184

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 185 LNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 240

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ +    R       + E + P L  +  EG           + +F  L Q
Sbjct: 241 NMCKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 298

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  DD+LN +E++
Sbjct: 299 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLEDL 357

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 358 VCDVVDRVLKSPAGSIVHELNPNFQPPKRPFKRMNYSDAIVWLKEHDVKKEDG-TFYEFG 416

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 417 EDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDSRLTE 460



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 46/121 (38%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +S     +         L+ N  EI  G +R + SE +L  +  
Sbjct: 439 RFPVEIKSFYMQRCPEDSRLTESVDV-------LMPNVGEIVGGSMRTYDSEEILAGYKR 491

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 492 EGIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCT 547

Query: 571 L 571
            
Sbjct: 548 P 548


>gi|241998236|ref|XP_002433761.1| lysyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215495520|gb|EEC05161.1| lysyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 580

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 109/255 (42%), Gaps = 10/255 (3%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
            +SG VH  R  G  +IF D+R      QV+AN      E A            G ++  
Sbjct: 133 SVSGRVHAKRESGTKLIFYDLRGEGTKIQVMANASYYSSEEA--FVKMNAKLRRGDILGC 190

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +   ++ +L+      LP        +  RF+ R+LDL  +   +
Sbjct: 191 IG--HPGKTKKGELSIVPVEMVLLAPCL-HMLPHLHFGLKDKETRFRQRYLDLIMNENVR 247

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
              + R++++N +R    +  F+E  TP++        A+ F+          Y +  AP
Sbjct: 248 QKFIMRSKVVNYVRKFFDSMGFLEVETPMMNMIPGGATAKPFITHHNELDMDLY-MRVAP 306

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D+++  E +L 
Sbjct: 307 ELYLKMLVVGGMDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYNDLMDMTEVMLS 365

Query: 259 GVFEEFSNGNTVSNN 273
           G+ +  +    V+ +
Sbjct: 366 GMVKSLTGSYKVTYH 380



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 4/86 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++L     E+ +     +   V  Q F      K   ++           + + 
Sbjct: 486 KGLTERFELFIARKEVVNAYTELNDPLVQRQRFEQQAKDKAAGDDEAQLVDETFCTSLEY 545

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVR 557
           G+PP  G   G+DR+VM L  + N++
Sbjct: 546 GLPPTAGWGMGLDRLVMFLTDSNNIK 571


>gi|320104601|ref|YP_004180192.1| asparaginyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319751883|gb|ADV63643.1| asparaginyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 471

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 93/289 (32%), Gaps = 24/289 (8%)

Query: 6   THSCGDLGVSDV--GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIA 62
           +HS  DL    V   S V + GW+   R    G+ FL + D      +     +      
Sbjct: 4   SHSIHDLLAGRVPFESSVTVQGWIRTRRDSKAGLSFLHVSDGSCFAPIQVVAPANLPNYT 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             V    V    G  +    + + +       E+ A +IE++   E+        + +  
Sbjct: 64  TEV----VRLTTGCAVIAHGKLVPSQGKGQTHEIQADRIEVVGWVEDPDTYPVSAKHHTF 119

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                   L  R +T       R  +  ++        F    TPI+T+S  EGA +   
Sbjct: 120 EYLRTVAHLRPRTNTFGAVARVRHCLSMAVHRFFHERGFFWVHTPIITSSDCEGAGEMFK 179

Query: 183 PSRVNQG--------------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
            S ++                 F+  P       Q           + +   P FR E+ 
Sbjct: 180 VSTLDLNNPPRDAQGQIDHSQDFFGKPAHLTVSGQLNVEAYCLALSKVYTFGPTFRAENS 239

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
            + R   EF+ ++ E++F +     +  E  L+ +F            F
Sbjct: 240 NTTRHLAEFWMIEPEVAFADLATNADLAEEFLKYLFRAVLEERADDLAF 288



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 7/98 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
             +D  ++ A   D++  G  EI  G  R    +V+      + + K+            
Sbjct: 375 LNDDGRTVAAM--DVLAPGIGEIIGGSQREERLDVLDTRLEELNLPKDEYW----WYRDL 428

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + G  PH G   G +R ++   G  N+R+V  FP + 
Sbjct: 429 RRYGTVPHAGFGLGFERTILYATGMSNIRDVIPFPRTP 466


>gi|224064651|ref|XP_002197190.1| PREDICTED: lysyl-tRNA synthetase [Taeniopygia guttata]
          Length = 586

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 59/257 (22%), Positives = 113/257 (43%), Gaps = 10/257 (3%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
            VR++G +H  R  G  +IF D+R      QV+AN  S+ ++  +           G ++
Sbjct: 121 TVRVAGRIHAKRAAGGKLIFYDLRGEGVKLQVMAN--SSLYKSEEEYFRVNSKLRRGDII 178

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDT 137
               E        G++ +   +I +LS      LP        +  R++ R+LDL   D 
Sbjct: 179 GV--EGNPGKTRKGELSIIPYEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDY 235

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQ 196
           + +  + R +II  +R  +    F+E  TP++        A+ F+        + Y +  
Sbjct: 236 VRQKFITRAKIITYLRSFLDELGFLEVETPMMNVIPGGAVAKPFITYHNELDMNLY-MRI 294

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E +
Sbjct: 295 APELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKL 353

Query: 257 LRGVFEEFSNGNTVSNN 273
           L G+ +  +    ++ +
Sbjct: 354 LSGMVKHITGSYKITYH 370



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
           L     +++L     E+ +     +      Q F +   +K   ++           A +
Sbjct: 475 LPGLTERFELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENFCTALE 534

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 535 YGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMK 570


>gi|114673287|ref|XP_001139091.1| PREDICTED: asparaginyl-tRNA synthetase isoform 3 [Pan troglodytes]
          Length = 510

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 70/344 (20%), Positives = 126/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V   +         + +E  + + G+
Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGM 184

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 185 LNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 240

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ +    R       + E + P L  +  EG           + +F  L Q
Sbjct: 241 NMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 298

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  DD+LN +E++
Sbjct: 299 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLEDL 357

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 358 VCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAIVWLKEHDVKKEDG-TFYEFG 416

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 417 EDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDSRLTE 460


>gi|254507050|ref|ZP_05119188.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219550045|gb|EED27032.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 466

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 125/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +   E +    G
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNN----LNNYDDEVLKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPAKGQDFELAATDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++      + F   S P++TAS  EGA +    S ++        
Sbjct: 132 NVIGAVARVRNCLSQAIHRFYHEQGFFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 191

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 KGDVDYNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            E++F + +DI    E++L+ VF+           F                      ++
Sbjct: 252 PEVAFADLNDIAKLSEDMLKFVFKAVLEECRDDLEFFAQRIDKQAITRLEQFVSSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI+       +   P+   +   +EH  +     F   + V    +          
Sbjct: 312 DYTDAIQILLDSGKEFEFPVEWGIDMSSEHERYLAEEHFKAPVIVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             RA  D     A     PG+  I 
Sbjct: 367 YMRANDDGKTVAAMDVLAPGIGEII 391



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 73/228 (32%), Gaps = 28/228 (12%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FW ++     A +  +AK    +     +  L+    D  FF      +  +      + 
Sbjct: 247 FWMVEPEVAFADLNDIAKLSEDMLKFVFKAVLEECRDDLEFFAQRIDKQAITRLEQFVSS 306

Query: 420 IAQELGIINC--------NCFEF--CWIMDFPFYEWNEEEKKIDFAHNPFTM----PQGG 465
              ++   +           FEF   W +D      + E ++     +            
Sbjct: 307 DFAQVDYTDAIQILLDSGKEFEFPVEWGID-----MSSEHERYLAEEHFKAPVIVKNYPK 361

Query: 466 MES---LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
                 ++ ND     A   D++  G  EI  G  R    E++ +    VGI        
Sbjct: 362 DIKAFYMRANDDGKTVA-AMDVLAPGIGEIIGGSQREERLEILDERMREVGIDP----EH 416

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                   + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 417 MNWYRDLRKYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|291458160|ref|ZP_06597550.1| asparagine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291419243|gb|EFE92962.1| asparagine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 520

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 68/352 (19%), Positives = 118/352 (33%), Gaps = 50/352 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWV 70
             +     + + GWV   R      FL I D    T +    + D   F     +     
Sbjct: 71  SAAYYDREITVGGWVRSNRDSKSFGFLVISDGSFFTPLQVVYHEDLENFPEIAKLGVGAA 130

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               EL A+ + I   +     P+  +R   E +R     
Sbjct: 131 VIVKGKLVATPE-------AKQPFELQAESVSIEGPSSPDY-PLQKKRHTLEYLR-SIPH 181

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +TL      R+ I  ++        F+   TPI+TAS  EGA +    + ++   
Sbjct: 182 LRPRTNTLQAVFRIRSLIAFAIHRFFQERGFVYVHTPIITASDAEGAGEMFQVTTLDLDQ 241

Query: 190 ------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+    +     Q      A  F   +   P FR E+  + R   EF
Sbjct: 242 LPRTEEGVDYGADFFGKKTSLTVSGQLNGESFAQAFRNIYTFGPTFRAENSNTQRHAAEF 301

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ EM+F E  DI++T E++L+ +             FL                   
Sbjct: 302 WMIEPEMAFAELSDIMDTAEDMLKFIIRHVLTEAPEEMEFLNSFVDKGLLERMRCILDSD 361

Query: 276 --RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
             RI Y +A+        D    +       TEH  +   ++F + + V   
Sbjct: 362 FGRISYTEAVEILEKHNADFEYKLSWGADLQTEHERYLTEKIFQRPVFVTDY 413



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 48/133 (36%), Gaps = 24/133 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K      NP              D  ++ A    LV    EI 
Sbjct: 406 RPVFVTDYP-----KEIKAFYMKQNP--------------DGRTVAAVDC-LVPGIGEII 445

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + +L     +G+        +       + G   HGG   G +R VM L G
Sbjct: 446 GGSQREEDYDRLLSRMEELGMDI----EAYRFYLDLRRFGTTRHGGFGLGFERAVMYLTG 501

Query: 553 AKNVREVSLFPMS 565
            +N+R+V  FP +
Sbjct: 502 MQNIRDVLPFPRT 514


>gi|94985010|ref|YP_604374.1| lysyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|94555291|gb|ABF45205.1| lysyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 512

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 64/290 (22%), Positives = 113/290 (38%), Gaps = 24/290 (8%)

Query: 6   THSCGDLGVSDVG---------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-D 55
           TH   D+  +                L+G V  +R  G   F D+ D  G  Q+  +  D
Sbjct: 43  THHSRDVLAAHPDAEPGQEWPEETYALAGRVTLLRHMGKAAFADLTDEQGRIQLHFSKQD 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +  F   K +    ++ + G               TGQ+ L  +  + L  +   PLP  
Sbjct: 103 TEHFNATKKIDLGDIIGVTG---------FPFVTKTGQLTLRVKSWQPLVKSL-HPLPSK 152

Query: 116 GEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                 E +R + R+LDL     + +    R+RII  +R  +    F+E   P L  ++ 
Sbjct: 153 FHGLQDEELRARRRYLDLMVTAGVRQKFQARSRIIRYLRNELDRRGFMEVEGPTLQVTAG 212

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+         F  L  + + Y + L+  GF+R ++I   +R+E       P E
Sbjct: 213 GAEARPFMTHHNALSHDF-KLRISLELYLKRLLVGGFERIYEIGRVYRNEGIDRTHNP-E 270

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
           F  L++  ++V+  +I   +E +L G+ +E     T       + +    
Sbjct: 271 FTMLELYWAYVDYTEIARLVEELLSGLAQELHGSYTFEYQGRTLDFTPPF 320



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 6/111 (5%)

Query: 459 FTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F M    + S     +        ++++ C+GFE+A+     + +      F      +E
Sbjct: 383 FVMDHPAVISPLAKRHRTRPGLTERFEVFCSGFELANAFSELNDAFDQRARFEAQSQRRE 442

Query: 517 ----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                   +      A + GMPP GG+  GIDR+VMLL  + ++R+V LFP
Sbjct: 443 AGDEEAHAQDEDFLLALEYGMPPAGGLGIGIDRLVMLLTDSDSIRDVLLFP 493


>gi|260776072|ref|ZP_05884967.1| asparaginyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260607295|gb|EEX33560.1| asparaginyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 492

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 66/373 (17%), Positives = 127/373 (34%), Gaps = 59/373 (15%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVL 71
           V S V + GW+   R    GI FL I D      + A    N ++   E+ K      V 
Sbjct: 42  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNNLNNYNEEVLKLTTGCSV- 100

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G ++   A+           EL+A  ++++   E+       +  +      +   L
Sbjct: 101 EVTGTIVESPAKG-------QDFELAATDVKVVGWVEDADTYPMAKTRHSIEYLREVAHL 153

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
             R + +      R  +  ++      + +   S P++TAS  EGA +    S ++  + 
Sbjct: 154 RPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENL 213

Query: 192 YALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
               +    Y +                    A    + +   P FR E+  + R   EF
Sbjct: 214 PRTEEGKVDYNEDFFGKETFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNTSRHLAEF 273

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNN 273
           + ++ E++F + +DI    E++L+ VF+                            V ++
Sbjct: 274 WMVEPEVAFADLEDIAKLSEDMLKYVFKAVLEERRDDLEFFAQRIDKEAITRLEKFVESD 333

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           F ++ Y DAI+       D   P+            +     +       ++   I    
Sbjct: 334 FAQVDYTDAIQILLDSGRDFEFPVEW--------GIDMSSEHERYLAEEHFKAPVIVKNY 385

Query: 334 GGGNRAFCDRMNE 346
               +AF  R+NE
Sbjct: 386 PKDIKAFYMRLNE 398



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 7/101 (6%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+     ++GI               
Sbjct: 396 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMRDIGIDP----EHMDWYRDL 449

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 450 RRYGTVPHSGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 490


>gi|149241914|ref|XP_001526379.1| lysyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146450502|gb|EDK44758.1| lysyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 597

 Score =  180 bits (456), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 5/257 (1%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
            V+++G +   R  G  + F  ++ D   +  +    D+   EI +             V
Sbjct: 126 TVQVTGRIMTKREAGAKLRFYVLKGDGVEVQIMAQAQDAESAEIYEKEHDLLKRGDIIGV 185

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +     T  A    G++ + A K+++L+      LP        +  R++ R+LDL  + 
Sbjct: 186 VGYPGRTAPAKGGDGELSVFATKVQLLTPCL-HMLPTEHYGFKDQEARYRKRYLDLIMND 244

Query: 138 LHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
             ++I K R++II  +R  +   +F+E  TPIL   +        V    +      +  
Sbjct: 245 RSRDIFKVRSQIIKYIRKFLDDRDFVEVETPILNVIAGGATAKPFVTHHNDLNMEMFMRI 304

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + + L+  G +R ++I   FR+E       P EF   +   ++ +  D+++T E +
Sbjct: 305 APELFLKELVVGGMNRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDTTEMM 363

Query: 257 LRGVFEEFSNGNTVSNN 273
              + +E + G  V  +
Sbjct: 364 FSEMVKEITGGYVVKYH 380



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 42/121 (34%), Gaps = 4/121 (3%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E E         F  PQ      K +  +     ++++     EI +     +       
Sbjct: 456 ELEDASINPTFIFGHPQMMSPLAKRDREIPGLCERFEVFVATKEICNAYTELNDPFDQRA 515

Query: 507 AFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F      K   ++           A + G+PP  G   GIDR+ M L  +  +REV LF
Sbjct: 516 RFEEQARQKAQGDDEAQLVDETFCNALEYGLPPTAGWGCGIDRLAMFLTDSNTIREVLLF 575

Query: 563 P 563
           P
Sbjct: 576 P 576


>gi|290987373|ref|XP_002676397.1| predicted protein [Naegleria gruberi]
 gi|284089999|gb|EFC43653.1| predicted protein [Naegleria gruberi]
          Length = 499

 Score =  179 bits (455), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 54/268 (20%), Positives = 105/268 (39%), Gaps = 14/268 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVL 71
             ++   V + GWV   R    + F+++ D       Q+V + +S   E    +++   +
Sbjct: 53  EQNIDKKVLVEGWVRTSRIQKDVCFVEVNDGSCNPNLQIVFDKNSIPAEELSKIQNGASV 112

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G ++    +     +       +  ++ +L    +   P+  +    E +R +   L
Sbjct: 113 RITGQLIKSPGKGQTTELA------NPTEVTVLGACPQDVYPLQKKGHSVEFLR-EISHL 165

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
             R +T    +  R   + ++       +FI+  TPILT+S  EGA +           F
Sbjct: 166 RSRTNTGAAVLRVRNAAMMAIHEYFQNLDFIQIHTPILTSSDCEGAGEQFKVISEQHKDF 225

Query: 192 Y-----ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           +     A      Q +  + AS   + +   P FR ED R+ R   EF+ ++ME +F+  
Sbjct: 226 FGENVNAYLTVSGQLEAEIFASSMSKVYTFGPTFRAEDSRTSRHLAEFWMVEMEQAFIGL 285

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNF 274
             I+   EN++R              +F
Sbjct: 286 PQIVEHSENMVRHAVSRVLERCEEDIHF 313



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 23/128 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ ++P     +E K       PF             D     +    LV +  E+ 
Sbjct: 384 SPVFVTNYP-----KEIK-------PFYARVD--------DNGKTMSAVDLLVPDLGELI 423

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G +R    ++++Q   + G+        +       + G  PHGG   G +R+++ L G
Sbjct: 424 GGSVREERYDILIQNMKDKGMKDT---KDYEWYLDLRKYGTVPHGGFGLGFERLILFLTG 480

Query: 553 AKNVREVS 560
             N+RE  
Sbjct: 481 IPNIRETI 488


>gi|164660706|ref|XP_001731476.1| hypothetical protein MGL_1659 [Malassezia globosa CBS 7966]
 gi|159105376|gb|EDP44262.1| hypothetical protein MGL_1659 [Malassezia globosa CBS 7966]
          Length = 506

 Score =  179 bits (455), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 54/260 (20%), Positives = 116/260 (44%), Gaps = 18/260 (6%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLCIDG 75
           V ++G +H +R  G  + F D+       Q++A    + +   FE    +R   V+ + G
Sbjct: 51  VCVAGRLHNMRASGQKLRFYDLHAEGVKIQIMAQMQDHREGDFFEAHDLLRRGDVVGVKG 110

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
                    + A    G++ +    I++L+   ++     G     +  R++ R+LDL  
Sbjct: 111 ---------VPAKTKKGELSIVPHAIQLLAPNLKMLPKASGGGFTDQEQRYRKRYLDLIM 161

Query: 136 DTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYA 193
           +   +   V R R I  +R  + +  F+E  TP++   +    A+ F+      +   + 
Sbjct: 162 NQHVRDIFVTRARTIQYVRRYLDSLGFLEVETPMMNQIAGGASAKPFITHHNDLKMDLF- 220

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  AP+ Y + L+  G DR +++   FR+E       P EF   +  M++ +  D+++  
Sbjct: 221 MRIAPELYLKELVVGGLDRVYEVGRVFRNESIDQTHNP-EFTTCEFYMAYADMYDLMDIT 279

Query: 254 ENVLRGVFEEFSNGNTVSNN 273
           E+++ G+ +  + G  V+ +
Sbjct: 280 ESMVSGLVKAVTGGYKVTYH 299



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 4/95 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQC 531
                +++      EIA+     +   V  + F      K+  ++           A + 
Sbjct: 408 PGLCERFEAFVATKEIANAYTELNDPWVQRENFEEQARQKDAGDDEAQAVDHVFLDALEH 467

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP GG   GIDR+VM L  +  ++EV  FP ++
Sbjct: 468 GLPPTGGWGMGIDRLVMFLTDSNTIKEVLAFPANK 502


>gi|146413276|ref|XP_001482609.1| asparaginyl-tRNA synthetase [Meyerozyma guilliermondii ATCC 6260]
          Length = 544

 Score =  179 bits (455), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 71/345 (20%), Positives = 132/345 (38%), Gaps = 27/345 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            ++GS V + GW+HR+R   G+ F+ +RD  G  Q V   D A  +    +  E  +CI 
Sbjct: 116 ENIGSRVAVRGWIHRLRLQKGLGFVTVRDGTGYVQCVLTGDLAKAKSTHELTLETSICIK 175

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--REYPESIRFKYRFLD 132
           G++              G +EL A   E++  A         +       S+    R L 
Sbjct: 176 GVINKLPEG----KSAPGGVELKADFYEVVGQAPSGEESFSNKVQENADPSLLLDQRHLT 231

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR + L   +  R+  + ++R     E  +E + P +  +  EG       +   + ++ 
Sbjct: 232 LRGEALSAVMKVRSAFLYAIRRFFEEEGLLEVTPPCMVQTQVEGGSTLFKMNYYGEDAY- 290

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL-- 250
            L Q+ Q Y +  + S     F +   FR E   + R   E+  ++ E++F++ +D+L  
Sbjct: 291 -LTQSSQLYLETCLPS-LGDVFCVQESFRAEKSHTRRHLSEYTHIEGELAFIDFEDLLVH 348

Query: 251 --NTMENVLRGVFEEFS----------NGNTVSNNFLRICYDDAIRR---YGTDKPDLRN 295
               +   ++ V E+            N       FLR+ Y DA+     +G    D   
Sbjct: 349 LEKLLTQTVKYVLEDPVAGPLIKQLNPNFVAPKGPFLRMEYVDALEWLNEHGIPNEDGEK 408

Query: 296 PIIMHNVTE-HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
                ++ E         +   IL +    E+ +   +    +R 
Sbjct: 409 FKFGDDIAEAAERKMTDTIGKPILLIRFPVEIKSFYMQKCADDRR 453



 Score = 60.9 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R +  + ++ +   
Sbjct: 435 RFPVEIKSFYMQKCADDRRVTESVDV-------LMPNVGEILGGSMRMYDYDELVASIKK 487

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+      + +       + G  PHGG   G +RI+  L     VR+ SL+P     C 
Sbjct: 488 EGLDL----DSYYWFTDLRKYGTCPHGGYGLGTERILAWLCDRFTVRDCSLYPRFSGRCK 543

Query: 571 L 571
            
Sbjct: 544 P 544


>gi|160878256|ref|YP_001557224.1| asparaginyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160426922|gb|ABX40485.1| asparaginyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 472

 Score =  179 bits (455), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 121/376 (32%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWV 70
               +G  + + GWV  VR      F+ + D      +        + F           
Sbjct: 22  KEQYLGKKITVGGWVRSVRDTKTFGFIVMSDGTFFETLQIVYTDKLSNFAEISKFNVGSA 81

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A+++ +L  A     P+  +R   E +R     
Sbjct: 82  VVVTGTLVATPD-------AKQPFEIQAEEV-LLEGASTSDYPLQKKRHSLEFLRA-MTH 132

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++       +F+   TP++T S  EGA +    + ++   
Sbjct: 133 LRPRTNTFQAVFRVRSLVAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDLNN 192

Query: 190 -------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+  P       Q      A  F   +   P FR E+  + R   E
Sbjct: 193 IPKTKEGQVDFDQDFFNKPTNLTVSGQLNGETYAMAFKNIYTFGPTFRAENSNTTRHAAE 252

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +  D +   E++L+ V +           F                   
Sbjct: 253 FWMIEPEIAFADLKDDMILAESMLKYVIKYVLEHAPEEMEFFNSFVDQGLLERLQHVANS 312

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
               + Y +AI     +       +       TEH      ++F K + V    +     
Sbjct: 313 DFGHVTYTEAIEILEKNNDKFEYKVSWGCDLQTEHERFLTEQIFKKPVFVTDYPKEI--- 369

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  ++NE
Sbjct: 370 -------KAFYMKLNE 378



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 53/140 (37%), Gaps = 26/140 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P     +E K        F M           D  ++ A   DL+  G  EI
Sbjct: 358 KPVFVTDYP-----KEIK-------AFYMK-------LNEDNKTVAAM--DLLVPGIGEI 396

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    + ++       ++    E  +       + G   H G   G +R VM L 
Sbjct: 397 IGGSQREDDYDKLVAKMKESDLN----EEDYDFYLDLRKYGSARHAGFGLGFERCVMYLT 452

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G  N+R+V  FP + N CDL
Sbjct: 453 GMGNIRDVIPFPRTVNNCDL 472


>gi|296272467|ref|YP_003655098.1| lysyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096641|gb|ADG92591.1| lysyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 504

 Score =  179 bits (455), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 7/259 (2%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           +SG +   R  G   FL I D  G+ Q+    D+       +V  + +    G ++    
Sbjct: 60  VSGRIKFFRLMGKASFLKIEDESGMLQLYLARDNLPEGFYNNVFKKNIEV--GDIIEVGG 117

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKN 141
                    G++ L    ++IL+ A   PLP        + +R++ R+LDL  +  + K 
Sbjct: 118 --FPFVTGQGELSLHVDSVQILTKAIS-PLPEKYHGIQDKELRYRQRYLDLIMNSEVRKT 174

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
              R+++I+  R    ++ F+E  TP++   +               G    L  AP+ Y
Sbjct: 175 FHVRSKVISLTRRFFESKGFLEVETPMMHPIAGGANAKPFTTHHNALGVDRFLRIAPELY 234

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+  GF+  F+I   FR+E   +   P EF  ++   ++    D++   +     +F
Sbjct: 235 LKRLIVGGFEAVFEINRNFRNEGMDATHNP-EFTSIEFYWAYKTYKDLIALTKEYFEYLF 293

Query: 262 EEFSNGNTVSNNFLRICYD 280
           E       +    + I ++
Sbjct: 294 ENLDLPTNLPYGEVEIDFN 312



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 56/178 (31%), Gaps = 29/178 (16%)

Query: 398 SCFFIAGDPLKFCSFA--ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
              F+    L+          +  +  E   +        +I ++P              
Sbjct: 340 IIAFMKEKNLEVNESMNIGQLQGELFDEY--VEEKLINPTFITEYP------------VE 385

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
            +P          L           +++L   G EIA+     +     L  F     +K
Sbjct: 386 ISPLARRNDEKTHLTD---------RFELFIAGKEIANAFSELNDPLDQLGRFEAQMAAK 436

Query: 516 EVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           +  ++           A   GM P  G   GIDR+VM+L    ++R+V LFP  +   
Sbjct: 437 DSGDDEAHEMDEDFVNALSYGMAPTAGQGIGIDRLVMMLTNQHSIRDVLLFPAMKPAK 494


>gi|294674370|ref|YP_003574986.1| lysine--tRNA ligase [Prevotella ruminicola 23]
 gi|294474187|gb|ADE83576.1| lysine--tRNA ligase [Prevotella ruminicola 23]
          Length = 575

 Score =  179 bits (455), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 111/279 (39%), Gaps = 10/279 (3%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             D    V ++G +   R  G   F +++D  G  QV    D  C    K + +     +
Sbjct: 47  KDDEDREVVIAGRMMSRRVMGKASFAELQDSKGRIQVYITRDDICPGENKDLYNNVFKRL 106

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFK 127
             +      +       TG+I + A ++ +LS + +    V  +      +     +R++
Sbjct: 107 LDIGDFIGVKGKVFRTQTGEISVHASELTLLSKSLKPLPIVKYKDGVAYDKFDDPELRYR 166

Query: 128 YRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSR 185
            R++DL  +  +    +KR  II +MR  +    + E  TPIL + +    AR F+    
Sbjct: 167 QRYVDLVVNEGVKDTFLKRATIIRTMRSILDNAGYTEVDTPILQSIAGGASARPFITHFN 226

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y +  A + Y + L+  GF+  +++   FR+E       P EF  +++ +S+ +
Sbjct: 227 ALNQDMY-MRIATELYLKRLIVGGFEGVYEMGKNFRNEGMDKTHNP-EFTCMELYVSYKD 284

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
               +   E +L  +    +    V  +   I +    R
Sbjct: 285 LLWGMTFTEKMLEEICTAVNGKPEVEIDGKVISFKAPFR 323



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++L+ NG E+A+     +      + F       +  ++          RA Q
Sbjct: 403 KPGLTERFELMVNGKELANAYSELNDPIDQEERFIEQMKLADKGDDEAMIIDHDFLRALQ 462

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GMPP  GI  GIDR+VML+ G   + EV LFP  +
Sbjct: 463 YGMPPTFGIGIGIDRLVMLMTGKFAIGEVMLFPQMK 498


>gi|254302420|ref|ZP_04969778.1| asparagine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322612|gb|EDK87862.1| asparagine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 461

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 71/413 (17%), Positives = 131/413 (31%), Gaps = 56/413 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
           G + +   + L GWV ++R      F+++ D       Q+V       F+    +     
Sbjct: 11  GENYLNKEIELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSIAST 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++               +E+ A KIEI   A+ L  P+  +R   E +R K   
Sbjct: 71  IKVKGTLVKSEGSG-------QDLEVKAHKIEIFQKAD-LEYPLQNKRHTFEYLRTK-AH 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++       NF+   TPI+T S  EGA +    + ++   
Sbjct: 122 LRPRTNTFSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEMFRITTLDLNK 181

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       + F   +   P FR E   + R   E
Sbjct: 182 VPKKENGEVDFSKDFFGKSTNLTVSGQLNVETFCAAFRNVYTFGPTFRAEYSNTARHASE 241

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +    +   E +++ + +   +       F                   
Sbjct: 242 FWMIEPEIAFGDLGANMELAEAMVKYIIKYVMDNCPEEMEFFNSFIEKGLFDKLNNVLNN 301

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+   +   +EH  +     F K     P +      
Sbjct: 302 DFGRVTYTEAIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYFKK-----PVFVTDYPK 356

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVN 383
                  +   D     A     PG+  I        N   +    K L +  
Sbjct: 357 DIKAFYMKLNEDNKTVRAMDLLAPGIGEIIGGSQREDNYELLTKRMKELGLNE 409



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P        K I      F M           D  +++A   DL+  G  EI
Sbjct: 347 KPVFVTDYP--------KDIKA----FYMK-------LNEDNKTVRAM--DLLAPGIGEI 385

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    E++ +    +G++    E  +       + G  PH G   G +R++M L 
Sbjct: 386 IGGSQREDNYELLTKRMKELGLN----EEDYEFYLDLRRFGSFPHSGYGLGFERMMMYLT 441

Query: 552 GAKNVREVSLFPMSQN 567
           G +N+R+V  FP + N
Sbjct: 442 GMQNIRDVIPFPRTPN 457


>gi|505108|dbj|BAA06688.1| KIAA0070 [Homo sapiens]
          Length = 601

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 59/287 (20%), Positives = 115/287 (40%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 131 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFIHINNKLRRGDIIGV 188

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +   +I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 189 QGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 245

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 246 QKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 304

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ 
Sbjct: 305 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMVS 363

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          ++ Y            D   P    N+ E 
Sbjct: 364 GMVKHITGSY-------KVTYHPDGPEGQAYDVDFTPPFRRINMVEE 403



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 483 KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 542

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 543 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMK 578


>gi|71897197|ref|NP_001026571.1| asparaginyl-tRNA synthetase, cytoplasmic [Gallus gallus]
 gi|53132771|emb|CAG31935.1| hypothetical protein RCJMB04_13p14 [Gallus gallus]
          Length = 559

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 64/344 (18%), Positives = 127/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GW+HR+R  G  ++F+ +RD  G  Q V +           + +E  + + G+
Sbjct: 136 GQRVKIFGWIHRLRRQGKNLMFIVLRDGTGFLQCVLSDALCQCYNGLLLSTESSVAVYGM 195

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  EL+    E++ +A           +    ++   R + +R +
Sbjct: 196 LNLVPEG----KQAPGGHELNCDYWELIGLAPAGGADNLLNEDSEVDVQLNNRHMMIRGE 251

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K    R+ ++ + R    A  + E + P L  +  EG           + ++  L Q
Sbjct: 252 NMSKIFKVRSMVVQAFRDHFFANGYYEVTPPTLVQTQVEGGSTLFKLDYFGEEAY--LTQ 309

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  +D+LN +E++
Sbjct: 310 SSQLYLETCIP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHIEAECPFISFEDLLNRLESL 368

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y +AI          ++    +   
Sbjct: 369 VCDVVDRVLTSPASALLLDLNPNFKPPKRPFRRMNYAEAIEWLKEHDVK-KDDGTYYEFG 427

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           E    +  R  +  ++       +    K     R   D R+ E
Sbjct: 428 EDIPEAPERFMTDTINEPILLCRFPAEIKSFYMQRCHDDSRLTE 471



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 46/121 (38%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +S     +         L+ N  EI  G +R   SE +L+ +  
Sbjct: 450 RFPAEIKSFYMQRCHDDSRLTESVDV-------LMPNVGEIVGGSMRIWDSEELLEGYKR 502

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 503 EGIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILDRHHIRDVCLYPRFVQRCK 558

Query: 571 L 571
            
Sbjct: 559 P 559


>gi|224006297|ref|XP_002292109.1| lysyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220972628|gb|EED90960.1| lysyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 610

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 65/305 (21%), Positives = 124/305 (40%), Gaps = 25/305 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              V ++G +  +R  G ++F DIR   G+   +          A S          G +
Sbjct: 129 DKIVTVAGRIQSIRGQGKLMFYDIR-GDGVQLQLMTSLKDYAGGADSFDEINRTIKRGDI 187

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--REYPESIRFKYRFLDLRR 135
           +   A        TGQ+ L   ++++LS    +     G          R++ R+LDL  
Sbjct: 188 I--GARGYAGKSKTGQLSLFPIEVQLLSPCLHMLPKAVGGHGGMTNMETRYRQRYLDLIV 245

Query: 136 DTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYA 193
           ++  + +  +R ++IN +R      +F+E  TP++        AR F+          + 
Sbjct: 246 NSDVRTVFERRAQVINYIRKYFNDRHFLEVETPMMNMIPGGAVARPFVTFHNDLSLEMF- 304

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +   ++ + +D+++  
Sbjct: 305 MRIAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCESYEAYADYNDLMDMT 363

Query: 254 ENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAI-RRYGTDKPDLRNPI 297
           E +L G+ +E + G  +                  F RI   + I  + G   P+L +P 
Sbjct: 364 EEMLSGMVKEITGGYKIKYQPKPNTEEVEIDFTPPFKRISMIEGIEEKIGQKLPELDDPK 423

Query: 298 IMHNV 302
           I   +
Sbjct: 424 IEVKL 428



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 6/117 (5%)

Query: 456 HNPFTMPQGGMESLKGNDLL--SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
           H  F      + S    +         +++L   G E+A+     +   V  Q F    +
Sbjct: 463 HPTFITEHPQIMSPLAKNHRDKKGLTERFELFVCGRELANAYTELNNPVVQYQRFLEQAM 522

Query: 514 SKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             +  ++           A + G+PP GG   G+DR+ M L    N++EV LFP  +
Sbjct: 523 QGKEGDDEAMIMDDSFITALEHGLPPTGGWGLGVDRLTMFLSNKNNIKEVLLFPAMK 579


>gi|302337560|ref|YP_003802766.1| aspartyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301634745|gb|ADK80172.1| aspartyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 423

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 68/263 (25%), Positives = 118/263 (44%), Gaps = 20/263 (7%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           C D+  S+ G  V + GW+HR+R  GG+ F+ +RD  G+ Q+        FE A  V  E
Sbjct: 5   CKDIAGSN-GQEVEVKGWIHRIRDLGGVCFIMLRDRSGMVQL-------VFESAPDVTLE 56

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGEREYPESIRF 126
            V+ ++G V        N     G  E+    +++LS   A+          +       
Sbjct: 57  SVVSVEGTV------QENKKAPDG-YEIQVSTMKVLSRAAADLPIQVNGDPDKLGIEAIL 109

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R + LR   +      ++ I+      + +++F E  +  L  S  EG          
Sbjct: 110 DNRVISLRNPKIRSIFHLQSNILAYFAEYLRSQDFTEIKSSKLIGSGSEGGTGLFEVEYF 169

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           ++  + A  Q+PQ YKQ ++ASG +R F+I   +R E   + R   E+  LD+EM F+E 
Sbjct: 170 DRKVYLA--QSPQLYKQTMVASGMERVFEIGAAYRAEKHDTPRHLNEYVSLDVEMGFIES 227

Query: 247 D-DILNTMENVLRGVFEEFSNGN 268
           D D+++    +L+ +F   +  +
Sbjct: 228 DQDLMDLETGILKHIFGRIAEYD 250



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 12/137 (8%)

Query: 443 YEWNEEEKK----IDFAHN----PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
           +E N E ++         +     F       +         +K   +DL+  G EI SG
Sbjct: 291 FELNPEGERELCEWALEKHGVELVFVNAFPRKKRPFYTYPDGMKTMSFDLLFRGLEITSG 350

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
             R +  +++++     G+          G    F+ G PPHGG A G++R    +LG  
Sbjct: 351 SRRINEYDMLVENIKRFGLDP----AGLAGYLEVFKYGAPPHGGFAIGLERFTQKVLGLS 406

Query: 555 NVREVSLFPMSQNFCDL 571
           +++E SLFP  +     
Sbjct: 407 SIKEASLFPRDRKRVAP 423


>gi|222149832|ref|YP_002550789.1| lysyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221736814|gb|ACM37777.1| lysyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 498

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 59/292 (20%), Positives = 124/292 (42%), Gaps = 20/292 (6%)

Query: 2   HRYRTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +L          ++ G  V ++G ++  R  G  +F+D+RD  G  Q+ ++
Sbjct: 36  HFHRTATTAELAEKYAELEPDTESGDTVTVAGRIYSSRNSG--MFMDLRDASGKIQIFSH 93

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D    E     R+   +   G ++  +          G++ ++A+ I +L+    LP+P
Sbjct: 94  KDMTPEE----ARAMLPMIDLGDIVGVTGPVRRTK--RGELTINAETITMLTKTL-LPMP 146

Query: 114 VFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                     +R++ R LD L  D       +R++I++ +R  M ++ F+E  TP+L + 
Sbjct: 147 EKYHGVTDIEVRYRKRHLDILTNDESKLRFQQRSKIVSGIRRFMESDGFMEVETPMLQSV 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLP 231
               + D              L  AP+ + +  + SG  D+ F+I   FR+E   +   P
Sbjct: 207 YGGASADPFKTHHNTLKQDMYLRIAPELFLKRTLVSGLADKIFEINRNFRNEGVSTRHNP 266

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
            EF  ++   ++ + +D+++ +E +   +          +     I +    
Sbjct: 267 -EFTMMECYWAYADYEDVMDLVERLFADLAMRIHGSTEFAFGDKEISFKGPF 317



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 4/126 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +    +    P+      K          +++  CN +EI +     +  E   +  
Sbjct: 373 EGTLIQPSHVTHFPKDISPFAKEVPGEPRLVERFETYCNAWEIGNAFSELNDPEEQRKRM 432

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                       +          A   GMPP GG+  G+DR++MLL  A ++R++ LFP 
Sbjct: 433 VEQLEQAHARGEKDKQLDDEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIRDIILFPA 492

Query: 565 SQNFCD 570
            +   D
Sbjct: 493 RRAKVD 498


>gi|225387011|ref|ZP_03756775.1| hypothetical protein CLOSTASPAR_00761 [Clostridium asparagiforme
           DSM 15981]
 gi|225047023|gb|EEG57269.1| hypothetical protein CLOSTASPAR_00761 [Clostridium asparagiforme
           DSM 15981]
          Length = 463

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 62/352 (17%), Positives = 114/352 (32%), Gaps = 51/352 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVL 71
            + +   + + GW+  +R      F+ + D       QVV + +   F     +     +
Sbjct: 14  EAYLDKEITIGGWIRSLRDSKAFGFIVVSDGSYFEPLQVVYHDNLTNFAEINKLNVGTAV 73

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +++               E+ A  + +   +     P+  +R   E +R     L
Sbjct: 74  IVTGTLVATPQ-------AKQPFEIQATGVVVEGTSAPDY-PLQKKRHSFEYLR-TISHL 124

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS- 190
             R +T       R+ I  ++        F+   TP++T S  EGA +    + ++    
Sbjct: 125 RPRTNTFQAVFRVRSLIAYAIHQYFQDRGFVYVHTPLITGSDCEGAGEMFQVTTMDLNDI 184

Query: 191 -------------FYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+  P       Q      A  F   +   P FR E+  + R   EF
Sbjct: 185 PKTEDGKVDFSQDFFGKPTNLTVSGQLNVETYAMAFRNVYTFGPTFRAENSNTPRHAAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ EM+F + DD +   E +L+ V            NF                    
Sbjct: 245 WMIEPEMAFADLDDNMCLAEGLLKYVIRYVLENAPAEMNFFNQFVDKGLLDRLKNVLESE 304

Query: 276 --RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
              I Y DA++            +       TEH  +   +VF K + V   
Sbjct: 305 FGHITYTDAVKILEEHNDQFDYKVSWGCDLQTEHERYLTEQVFKKPVFVTDY 356



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 52/139 (37%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P     +E K        F M           D  ++ A    LV    EI 
Sbjct: 349 KPVFVTDYP-----KEIK-------AFYMKM-------NPDNKTVAAVDC-LVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + ++     +G+ K      +       + G   H G   G +R VM L G
Sbjct: 389 GGSQREDDYDTLVARMDELGLKK----EDYDFYLDLRKYGSNRHAGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N C+L
Sbjct: 445 MTNIRDVIPFPRTVNNCEL 463


>gi|314982014|gb|EFT26107.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315090829|gb|EFT62805.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
          Length = 1081

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 63/253 (24%), Positives = 107/253 (42%), Gaps = 10/253 (3%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GD+ V   G  + +SG V   R HGG+IF+D+ D  G  Q+V   DS   +  +  R
Sbjct: 626 HRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDLFDWTGACQLVMERDSMGVDSLRDFR 685

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L   G  +  +     +    G + L      + + +             PE  + 
Sbjct: 686 HTVSL---GDHLVATGTVGASR--NGTLSLEMTSWRLAAKSLRPLPSRRSGFNDPE-AKV 739

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS 184
           + R+LDL  +    + ++ R+  I ++R  +++ ++IE  TPIL T      AR F    
Sbjct: 740 RQRYLDLIVNPSACDQLRARSNAIRAVRETLLSHDYIEVETPILQTIHGGANARPFHTHI 799

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  AP+ Y + LM  G  R F+I   FR+E   +   P EF  L+   ++ 
Sbjct: 800 NAYDLDLY-LRIAPELYLKRLMVGGAGRVFEIGRNFRNEGADATHNP-EFTMLEAYQAYG 857

Query: 245 EQDDILNTMENVL 257
           +   + +    ++
Sbjct: 858 DYVQMRHLTREMI 870



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 472  NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYR 527
            +D     A ++DL+  G E+ +         +  + F+   +                  
Sbjct: 982  DDPR--LAEKWDLIIFGSEVGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLE 1039

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A +  MPP GG+  G+DR+VM+L  A ++RE   FP
Sbjct: 1040 ALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074


>gi|290559859|gb|EFD93182.1| tRNA synthetase class II (D K and N) [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 427

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 72/312 (23%), Positives = 138/312 (44%), Gaps = 25/312 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIAKSVRSEWVL 71
           + +    +++ GW   VR  GG+ F+ +RD  G  QV  +   +   FE+   +++E V+
Sbjct: 2   IKNENGSIKVIGWAENVRNLGGLAFITVRDINGKYQVTVSKKSNEKLFEMIPEIKAESVI 61

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-FGEREYPESIRFKYRF 130
            ++G     +A+ IN        E+    +E+++VAE+        + E        +RF
Sbjct: 62  EVNGT-RKDNAKAING------YEIIPDSLELITVAEQPVPLNLSDKVESSLDKDLDFRF 114

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR+  +      ++ +  ++       NF +  +  + + + EG  +       ++ +
Sbjct: 115 LSLRKPKVAATFRVQSTVSGAITKFFEENNFYQIHSSKIISQATEGGANVFQVLYFDKTA 174

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDI 249
           F A  Q+PQ YKQ++MA+GF+R F+I P FR E   + R   E+  +DMEMSF+   ++I
Sbjct: 175 FLA--QSPQFYKQMMMAAGFERVFEIGPVFRAEPHHTSRHLTEYTSVDMEMSFINSYEEI 232

Query: 250 LNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           ++ ME ++  +++E                      F RI   +A          L+   
Sbjct: 233 MSVMEQLMLAIYKEVKSKNAKDLEVHGVKLEDPVIPFPRITMKEAAGILEKYGNKLKEDG 292

Query: 298 IMHNVTEHFVHS 309
            +    E  +  
Sbjct: 293 DIDPEGERILGK 304



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 4/97 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
                 + DL+  G EI +   R H   V++      G+       +F      F+ G+P
Sbjct: 335 DKSVTNRADLIYKGLEITTLAQREHRYSVLVSQLEEKGLDP----EKFKFYTDFFRYGVP 390

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PHGG   G++RIV  +L  +NV E +L P +      
Sbjct: 391 PHGGSGTGLERIVKQMLNLENVAEATLLPRTPERLTP 427


>gi|260591365|ref|ZP_05856823.1| lysine--tRNA ligase [Prevotella veroralis F0319]
 gi|260536731|gb|EEX19348.1| lysine--tRNA ligase [Prevotella veroralis F0319]
          Length = 577

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 53/278 (19%), Positives = 109/278 (39%), Gaps = 10/278 (3%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            +    V ++G +   R  G   F +I+D  G  QV    D  C    K + ++    + 
Sbjct: 48  ENEQREVTIAGRMMGRRIMGKASFAEIQDSKGRIQVYITRDDICPGEDKELYNKVFKKLL 107

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFKY 128
            +      +        G+I + A++I +LS + +    V  +      +      R++ 
Sbjct: 108 DIGDFIGVKGYVFKTQMGEISIHAKEITLLSKSLKPLPIVKYKDGEAYDKFEDPEQRYRQ 167

Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R++DL  +  +    +KR  ++ +MR       + E  TP L +      AR F+     
Sbjct: 168 RYVDLVVNDGVKDTFLKRATVLRTMRQFFDEAGYTEVETPTLQSIPGGASARPFITHFNA 227

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + 
Sbjct: 228 LNIDMY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRFHNP-EFTCMELYVQYKDY 285

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           + +++  E +L  +    +    V      I +    R
Sbjct: 286 NWMMSFTEQLLEKICVAVNGKPEVQMGDKVISFKAPFR 323



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+A+     +      + F
Sbjct: 379 EGTYIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERF 438

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +     +  ++          RA Q GMPP  GI  GIDR+VML+ G + ++EV LFP 
Sbjct: 439 LDQMHLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGKEYIQEVMLFPQ 498

Query: 565 SQ 566
            +
Sbjct: 499 MK 500


>gi|15800791|ref|NP_286805.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15830267|ref|NP_309040.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168751196|ref|ZP_02776218.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168757025|ref|ZP_02782032.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168762930|ref|ZP_02787937.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|168769928|ref|ZP_02794935.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168776214|ref|ZP_02801221.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168783976|ref|ZP_02808983.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168787362|ref|ZP_02812369.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|195939655|ref|ZP_03085037.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208815310|ref|ZP_03256489.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208822648|ref|ZP_03262967.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209397026|ref|YP_002269602.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217325811|ref|ZP_03441895.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254792130|ref|YP_003076967.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261227434|ref|ZP_05941715.1| asparaginyl tRNA synthetase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261256143|ref|ZP_05948676.1| asparaginyl tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291281931|ref|YP_003498749.1| Asparaginyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|20139877|sp|P58694|SYN_ECO57 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|12514105|gb|AAG55415.1|AE005283_2 asparagine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13360472|dbj|BAB34436.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187768340|gb|EDU32184.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188014709|gb|EDU52831.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188998770|gb|EDU67756.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189355907|gb|EDU74326.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189361160|gb|EDU79579.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189366782|gb|EDU85198.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|189372735|gb|EDU91151.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|208731958|gb|EDZ80646.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208738133|gb|EDZ85816.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209158426|gb|ACI35859.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209774698|gb|ACI85661.1| asparagine tRNA synthetase [Escherichia coli]
 gi|209774700|gb|ACI85662.1| asparagine tRNA synthetase [Escherichia coli]
 gi|209774702|gb|ACI85663.1| asparagine tRNA synthetase [Escherichia coli]
 gi|209774704|gb|ACI85664.1| asparagine tRNA synthetase [Escherichia coli]
 gi|209774706|gb|ACI85665.1| asparagine tRNA synthetase [Escherichia coli]
 gi|217322032|gb|EEC30456.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254591530|gb|ACT70891.1| asparaginyl tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290761804|gb|ADD55765.1| Asparaginyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320192584|gb|EFW67225.1| Asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320637799|gb|EFX07591.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320642924|gb|EFX12125.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320648381|gb|EFX17036.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320653697|gb|EFX21771.1| asparaginyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320659842|gb|EFX27398.1| asparaginyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320664311|gb|EFX31462.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|326338175|gb|EGD62004.1| Asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|326346152|gb|EGD69890.1| Asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
          Length = 466

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 126/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +     Q E+   K+E+    E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASPGQGQQFEIQTSKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +DI    E +L+ VF+                            +  +F ++
Sbjct: 252 PEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y +A+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTEAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+ +    +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|269986727|gb|EEZ93007.1| aspartyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 429

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 80/339 (23%), Positives = 149/339 (43%), Gaps = 25/339 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVL 71
           +S+    + L GW   VR  GG+ F+ +RD  G  QV  + +S    FE    +++E V+
Sbjct: 4   ISNENGKIELEGWAENVRNLGGLAFITVRDINGRYQVTVSKNSNPEIFEKINEIKAESVI 63

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYPESIRFKYRF 130
              G       +  NA  + G  E+  +K+EI++ AE+       E+ +        +RF
Sbjct: 64  KAVG------EKKENAKAVNG-YEIIPEKLEIITTAEQPVPLNLSEKVQSSLDKEIDFRF 116

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR+         ++ + N++      + F +  +  + + + EG  +       ++ +
Sbjct: 117 LSLRKPKTAAIFKIQSTVSNAITKFFEDQGFYQIHSSKIISQATEGGANVFQVLYFDKTA 176

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDI 249
           F A  Q+PQ YKQ++MA+GF++ F+I P FR E   + R   E+  +D+EMSF+   +D+
Sbjct: 177 FLA--QSPQFYKQMMMAAGFEKVFEIGPVFRAEPHHTSRHLTEYTSVDLEMSFIKSYEDV 234

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP-IIMHNVTEHFVH 308
           ++ ME ++  +F+E            R   D  +     D P +  P I +   +E    
Sbjct: 235 MSVMEKLILRIFKEVRE---------RNKNDLELYGIKLDDPQVPFPRITIKEASEILKK 285

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
              ++         G  +     K    +  F   + E+
Sbjct: 286 YGNKLKDDGDIDPEGERIMGQYVKEKYNSDFFF--LTEF 322



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 5/110 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F         +K  D   +   + DL+  G EI +   R H  +V++       +     
Sbjct: 322 FPWSIAQFYHMKKEDNKEV-TNRADLIYKGLEITTLAQREHRYDVLISQLKEKNLDP--- 377

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             +F      F+ G+PPHGG   G++RIV  +L  +NV E +L P + + 
Sbjct: 378 -EKFKFYTDFFRYGVPPHGGSGTGLERIVKQMLNLENVAEATLLPRTPDR 426


>gi|11095909|gb|AAG30114.1|AF285758_1 lysyl-tRNA synthetase [Homo sapiens]
          Length = 625

 Score =  179 bits (455), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 59/287 (20%), Positives = 115/287 (40%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 155 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFIHINNKLRRGDIIGV 212

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +   +I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 213 QGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 269

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 270 QKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 328

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ 
Sbjct: 329 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMVS 387

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          ++ Y            D   P    N+ E 
Sbjct: 388 GMVKHITGSY-------KVTYHPDGPEGQAYDVDFTPPFRRINMVEE 427



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 507 KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 566

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 567 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMK 602


>gi|254524734|ref|ZP_05136789.1| asparaginyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219722325|gb|EED40850.1| asparaginyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 464

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 118/385 (30%), Gaps = 54/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  VR    + F+++ D       QVVAN   A F+  K + S   +   G
Sbjct: 17  GGEVTVRGWVRTVRGSANLAFVNVSDGSCFAPIQVVANDSLANFDEIKRLTSGCSVIATG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++    +  +        E+ A  +E++   E+        +        +   L  R 
Sbjct: 77  TLVKSQGKGQS-------FEIQASALEVVGWVEDPLTYPIQPKPMSPEFLREVAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +        R  +  ++        F   STPI+T S  EGA      S ++        
Sbjct: 130 NLFGAVTRIRNCLAQAVHRFFHENGFNWISTPIITTSDAEGAGQMFRVSTLDMVNLPRDE 189

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q           + +   P FR E+  + R   EF+ ++
Sbjct: 190 KGAIDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHLAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F +  +     E  L+ +F    N                      + ++  F RI
Sbjct: 250 PEIAFADLAEDARLAEEFLKYLFRAVLNERSDDLAFIAERVDKNAITKLEDFINAPFERI 309

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+            P+   +   TEH         ++     P             
Sbjct: 310 DYTDAVSLLQKSGKKFDFPVEWGLDLQTEHERW-----LTEEHVGRPVVVTNYPEHIKAF 364

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 365 YMRLNDDGKTVAAMDVLAPGIGEII 389



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 12/152 (7%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKA 479
           ++  +  +F + +++      E E+ +   H                  ++ ND     A
Sbjct: 317 LLQKSGKKFDFPVEWGLDLQTEHERWLTEEHVGRPVVVTNYPEHIKAFYMRLNDDGKTVA 376

Query: 480 FQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              D++  G  EI  G  R    +V+    +  G+ +      +       + G  PH G
Sbjct: 377 -AMDVLAPGIGEIIGGSQREERLDVLDARMAQFGLDR----EHYSWYRDFRRYGSVPHAG 431

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              G +R+V+ + G  N+R+   +P +    D
Sbjct: 432 FGLGFERLVVYVCGLSNIRDAIPYPRAPGSAD 463


>gi|194759334|ref|XP_001961904.1| GF15206 [Drosophila ananassae]
 gi|190615601|gb|EDV31125.1| GF15206 [Drosophila ananassae]
          Length = 558

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 68/349 (19%), Positives = 132/349 (37%), Gaps = 23/349 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G ++ GS V++ GWVHR+R  G  +IF+ +RD  G  Q V N        A ++ +E  +
Sbjct: 130 GTANRGSRVKIYGWVHRLRRQGKSLIFITLRDGTGFLQCVLNDQLCQTYDALTLSTESTV 189

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  EL+    E++ +A           E    ++   R +
Sbjct: 190 VLFGTLKLVPEG----KTAPGGHELNVDYWELIGLAPPGGADAILNEEAQPDVQLDNRHI 245

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R+ +  + R       + E + P L  +  EG           + ++
Sbjct: 246 MIRGENTSKVLKMRSVVAQAFRAHYEERGYNEVTPPTLVQTQVEGGSTLFKLKYFGEEAY 305

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  +       F I+  +R E  R+ R   E+  ++ E  F+  +++L+
Sbjct: 306 --LTQSSQLYLETCLP-ALGDVFTISQSYRAEQSRTRRHLAEYSHVEAECPFITFEELLD 362

Query: 252 TMENVLRGVFEEFSNGNT-------------VSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            +E+++  V +                        F R+ Y DAI+    D    ++   
Sbjct: 363 RLEDLVCDVVDRVLKSPWGYLVKELNPDFQPPKKPFRRMNYVDAIQWL-KDNNVTKDDGT 421

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
            +   E    +  R  +  ++       +    K    +R   D R+ E
Sbjct: 422 FYEFGEDIPEAPERKMTDTINEPIMLCRFPAEIKSFYMSRCKEDQRLTE 470



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R H SE +L+ +  
Sbjct: 449 RFPAEIKSFYMSRCKEDQRLTESVDV-------LLPNVGEIVGGSMRIHDSEELLKGYER 501

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI  +     +         G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 502 EGIDPKP----YYWYTDQRIYGTMPHGGYGLGLERFLCWLLNRYHIREVCLYPR 551


>gi|149038241|gb|EDL92601.1| lysyl-tRNA synthetase, isoform CRA_a [Rattus norvegicus]
          Length = 499

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 60/287 (20%), Positives = 117/287 (40%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 156 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFVHINNKLRRGDIIGV 213

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E        G++ +  +++ +LS      LP        +  R++ R+LDL  +   +
Sbjct: 214 --EGNPGKTKKGELSIVPREMTLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 270

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 271 QKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 329

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E +L 
Sbjct: 330 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMLS 388

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+    +          +I Y          + D   P    ++ E 
Sbjct: 389 GMVRSITGSY-------KITYHPDGPEGQAYEIDFTPPFRRISMVEE 428


>gi|320581604|gb|EFW95824.1| Lysyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 590

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 54/260 (20%), Positives = 116/260 (44%), Gaps = 13/260 (5%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCIDG 75
            V ++G +   R  G  + F ++       Q++A   + +    E+   +R   ++ ++G
Sbjct: 123 KVSVAGRIMVKRESGSKLKFYNLAGEGTNVQIMAQAQDAEGDFQEMHDILRRGDIIGVEG 182

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
                   T  A    G++ + A K+++L+      LP        +  R++ R+LDL  
Sbjct: 183 Y----PGRTNPAKGGEGELSVFATKVKLLTPCL-HMLPTEHYGFKDQEARYRKRYLDLIM 237

Query: 136 DTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYA 193
           +   K+  V R++II+ +R  + + NFIE  TP++   +    A+ F+          Y 
Sbjct: 238 NKSTKDTFVTRSKIISYIRKFLDSRNFIEVETPMMNVIAGGATAKPFITHHNDLDMDMY- 296

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  AP+ + + L+  G +R ++I   FR+E       P EF   +   ++ +  D+++T 
Sbjct: 297 MRIAPELFLKELVVGGLERVYEIGRQFRNEGIDMTHNP-EFTTCEFYEAYADVYDLMDTT 355

Query: 254 ENVLRGVFEEFSNGNTVSNN 273
           E +   + +E +    +  +
Sbjct: 356 ELLFSEMVKEITGDYKIKYH 375



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 42/121 (34%), Gaps = 4/121 (3%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E E         F  PQ      K +        ++++     EI +     +      Q
Sbjct: 451 ELEDTCINPTFIFGHPQMMSPLAKYDRSKPGLCERFEVFVATKEICNAYTELNDPFDQRQ 510

Query: 507 AFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F      K   ++           A + G+PP  G   GIDR+ M L  +  +REV LF
Sbjct: 511 RFEEQARQKAQGDDEAQLIDETFCNALEYGLPPTAGWGCGIDRLAMFLTDSNTIREVLLF 570

Query: 563 P 563
           P
Sbjct: 571 P 571


>gi|113970465|ref|YP_734258.1| asparaginyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123324982|sp|Q0HIB6|SYN_SHESM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|113885149|gb|ABI39201.1| asparaginyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 466

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 69/389 (17%), Positives = 120/389 (30%), Gaps = 50/389 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    GI FL + D      +     ++       V    + 
Sbjct: 12  GEHAVGSTVTVRGWVRTRRDSKAGISFLAVYDGSCFNPIQGVVPNSLENYDNEV----LK 67

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  + E + +       EL   ++E+    E+        + +      +   L
Sbjct: 68  LTAGCSVIVTGEIVESPGAGQAYELQVTQVEVTGWVEDPDTYPMAAKRHSIEHLRELAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R + +      R  +  ++        F+  STP++TAS  EGA +    S ++    
Sbjct: 128 RPRTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAGEMFRVSTLDMENL 187

Query: 190 ------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRTSDGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ E++F    DI N  E +L+  F            F                    
Sbjct: 248 WMVEPEVAFATLSDIANLAEGMLKYAFNAVLAERMDDLQFFAQHVDKTVIERLQSFVSSD 307

Query: 276 --RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
             ++ Y DA+        +   P+   +   +EH  +     F   + V    +      
Sbjct: 308 FAQVDYTDAVEILQKCGREFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDI---- 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 364 -KAFYMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      + ++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDMRLEEMDLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+V  + G  N+R+V  FP +  
Sbjct: 424 RRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPRAPR 462


>gi|237730893|ref|ZP_04561374.1| asparaginyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226906432|gb|EEH92350.1| asparaginyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 478

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 127/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 28  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNQDV----LRLTTG 83

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A ++E+    E+        + +      +   +  R 
Sbjct: 84  CSVIVTGKVVASPGQGQSFEIQATEVEVTGWVEDPDTYPMAAKRHSIEYLREVAHMRPRT 143

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 144 NMIGAVARVRHTLAQALHRFFHEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 203

Query: 188 ------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 204 QGKVDFDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 263

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + +D+    E +L+  F+                            +  +F ++
Sbjct: 264 PEVAFADLNDVAGLAEAMLKYAFKAVLAERADDMKFFAERVDKDAISRLERFIDADFAQV 323

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 324 DYTDAVSILEKCGKQFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 378

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 379 YMRLNEDGKTVAAMDVLAPGIGEII 403



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      +G++K      +      
Sbjct: 382 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMLEMGLNK----EDYWWYRDL 435

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 436 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 474


>gi|149719602|ref|XP_001492609.1| PREDICTED: similar to MGC152259 protein [Equus caballus]
          Length = 477

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 18/250 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V++ GW+  VR    ++FL I D   +  +    DS+    +K +     + + G +
Sbjct: 41  GERVKVQGWIRSVRSQKEVLFLHINDGSSLESLQVVADSSF--DSKELAFGSSVEVQGQL 98

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +   ++  N       +EL A+KIE++   +    P   +  +P     +Y  L  R + 
Sbjct: 99  VKSPSKRQN-------VELKAEKIEVVGNCDAKAFPFKYKERHPLEYLRQYPHLRCRTNV 151

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-----RVNQGSFY 192
           L   +  R+    ++        F+   TPI+T++  EGA +          +V + +F+
Sbjct: 152 LGSILRVRSEATAAIHSFFKDSGFVHIHTPIITSNDCEGAGELFRVEPSSKVKVPEENFF 211

Query: 193 ---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
              A      Q    +M+  F + F   P FR E+ +S R   EFY ++ E+SFVE   D
Sbjct: 212 NVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEISFVESLQD 271

Query: 249 ILNTMENVLR 258
           ++  ME + +
Sbjct: 272 LMQVMERLFK 281



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 54/153 (35%), Gaps = 25/153 (16%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            H   E  ++        +++++P             A  PF M                
Sbjct: 347 LHTEHEKFLVKHCGNIPVFVVNYPL------------ALKPFYMRDNED------GPQHT 388

Query: 478 KAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
            A   DL+  G  E+  G +R      + Q  +  G+++      +       + G  PH
Sbjct: 389 VA-AVDLLVPGVGELFGGSLREERYHFLEQRLARSGLTEA-----YQWYLDLRRFGSVPH 442

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           GG   G +R +  +LG  N+++V  FP   + C
Sbjct: 443 GGFGMGFERYLQCILGIDNIKDVIPFPRFTHSC 475


>gi|149371919|ref|ZP_01891238.1| lysyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149355059|gb|EDM43620.1| lysyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 563

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 62/342 (18%), Positives = 131/342 (38%), Gaps = 31/342 (9%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS--EWVLCI 73
           + G  V ++G + R +  G   F +++D  G  QV  N D  C    K++ +     L  
Sbjct: 44  EEGKKVVIAGRLMRKKIQGKASFGELQDSEGRIQVYFNRDEICEGEDKTLYNDVFKKLLD 103

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRF 126
            G  +  + E     +  G+  +  ++  +LS   +       + E           +R+
Sbjct: 104 LGDFIGITGELFTTQV--GEPTVLVKEFTLLSKTLKPLPLPKTDAEGKTYDEFNDPELRY 161

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R++DL  +   K + K RT++ N+MR      ++ E  TPIL   +   A    +   
Sbjct: 162 RQRYVDLVVNPKVKEVFKKRTKLFNAMRTFFNERDYFEVETPILQPIAGGAAARPFITHH 221

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            +      +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +S+ +
Sbjct: 222 NSLDIPLYMRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVSYKD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNV 302
            + +++  E +L     + +  +  +              +G  + D + P   + M + 
Sbjct: 281 YNWMMDFCEQLLEFCAIQVNGTSKTT--------------FGEHEIDFKAPYARVTMADS 326

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            +HF   +         +    +   I      G     D +
Sbjct: 327 IKHFTGFDITG-KSEDELRAAAKDMGIAVDNTMGKGKLIDEI 367



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 5/123 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 373 EGNYIQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSELNDPIDQRERF 432

Query: 509 SNVGISKEVVENRF-----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                  E  ++           RA + GMPP  G+  G+DR++M L    +++EV  FP
Sbjct: 433 EAQLKLAEKGDDEATAFIDHDFLRALEYGMPPTSGMGIGMDRLIMYLTNNPSIQEVLFFP 492

Query: 564 MSQ 566
             +
Sbjct: 493 QMR 495


>gi|114047699|ref|YP_738249.1| asparaginyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|122944635|sp|Q0HUL3|SYN_SHESR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|113889141|gb|ABI43192.1| asparaginyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 466

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 69/389 (17%), Positives = 120/389 (30%), Gaps = 50/389 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    GI FL + D      +     S+       V    + 
Sbjct: 12  GEHAVGSTVTVRGWVRTRRDSKAGISFLAVYDGSCFNPIQGVVPSSLENYDNEV----LK 67

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  + E + +       EL    +E+    E+        + +      +   L
Sbjct: 68  LTAGCSVIVTGEIVESPGAGQAYELQVTHVEVTGWVEDPDTYPMAAKRHSIEHLRELAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R + +      R  +  ++        F+  STP++TAS  EGA +    S ++    
Sbjct: 128 RPRTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAGEMFRVSTLDMENL 187

Query: 190 ------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRTSDGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ E++F    DI +  E +L+  F+           F                    
Sbjct: 248 WMVEPEVAFATLSDIASLAEGMLKYAFDAVLAERMDDLQFFAQHVDKTVIERLQSFVSSD 307

Query: 276 --RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
             ++ Y DA+        +   P+   +   +EH  +     F   + V    +      
Sbjct: 308 FAQVDYTDAVEILQKCGREFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDI---- 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 364 -KAFYMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      + ++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDMRLEEMDLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+V  + G  N+R+V  FP +  
Sbjct: 424 RRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPRAPR 462


>gi|322418305|ref|YP_004197528.1| asparaginyl-tRNA synthetase [Geobacter sp. M18]
 gi|320124692|gb|ADW12252.1| asparaginyl-tRNA synthetase [Geobacter sp. M18]
          Length = 460

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 80/384 (20%), Positives = 140/384 (36%), Gaps = 54/384 (14%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L     GS + + GW   VR   G+ F+ + D   +   QVVA PD + +E  
Sbjct: 4   RTRVKQALTEK-PGSTILVKGWARTVRNGKGVTFISLNDGSCLSGIQVVAEPDLSNYEEV 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             + +   L + GL+    A           +EL AQ +E++  A++   P+  +R   E
Sbjct: 63  TGIGTGSALAVTGLLQESPAAG-------QDLELKAQSLEVVGGADQ-EYPMQKKRHSFE 114

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R     L +R +T       R+ +   +        F+   TPI+TA+  EGA +   
Sbjct: 115 YLR-TIAHLRVRSNTFGAVFRVRSALAQEVHRFFAERGFLYVHTPIITANDCEGAGELFR 173

Query: 183 PSRVNQ-------------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
            + ++                F+A         Q +  L A  F   +   P FR E+  
Sbjct: 174 VTTLDLAHPPLVNGEIDFSEDFFATATGLTVSGQLEGELFAQAFSDIYTFGPTFRAENSN 233

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL----------- 275
           + R   EF+ ++ EM+F +  D  +  E  L+ +     +       F            
Sbjct: 234 TARHAAEFWMIEPEMAFADLSDDADLAEAFLKRLCRFALDNCAEDMKFFNAQIDKGLIER 293

Query: 276 ----------RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK---ILSV 320
                     R+ Y +AI R        + P+   +   +EH  +   +V      IL+ 
Sbjct: 294 IEGVARASFARMDYGEAIERLKKATVSFQFPVEWGLDLQSEHERYLTEQVVGGPVFILNY 353

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRM 344
               + + +     G   A  D +
Sbjct: 354 PKDIKAFYMRQNDDGKTVAAMDLL 377



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 77/220 (35%), Gaps = 16/220 (7%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG------DPLKFCSFA 413
           FW ++     A +   A           R  LD    D  FF A       + ++  + A
Sbjct: 241 FWMIEPEMAFADLSDDADLAEAFLKRLCRFALDNCAEDMKFFNAQIDKGLIERIEGVARA 300

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID---FAHNPFTMPQGGMES-- 468
           + AR    + +  +      F + +++     +E E+ +         F +         
Sbjct: 301 SFARMDYGEAIERLKKATVSFQFPVEWGLDLQSEHERYLTEQVVGGPVFILNYPKDIKAF 360

Query: 469 -LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
            ++ ND     A    LV    EI  G  R    E++ Q     G++             
Sbjct: 361 YMRQNDDGKTVAAMDLLVPKVGEIIGGSQREERLELLEQRMLETGVAP----ESLSWYLD 416

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             + G  PH G   G +R++M L G +N+R+V  FP +  
Sbjct: 417 TRRWGSTPHAGFGLGFERLLMYLTGMENIRDVVPFPRTPR 456


>gi|223040265|ref|ZP_03610543.1| lysyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878518|gb|EEF13621.1| lysyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 502

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 61/291 (20%), Positives = 113/291 (38%), Gaps = 17/291 (5%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H       S  G  V L+G V  +R  G  IF +I D  G  Q+  +  +   +  K V+
Sbjct: 45  HIIDTEEKSAEGQLVSLAGRVKLIRDAGKAIFANIEDEDGNLQIYFSNKTLDPDWFKVVK 104

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               + +  ++  R          TG+  +   ++ + S A   PLP           R+
Sbjct: 105 KN--IEVGDIIYVRG---YAFVTRTGEFSMHVSELTLASKAVS-PLPEKFHGLTDIETRY 158

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LD+  +  +  +  +R+ I++++R     + F+E  TP++            V   
Sbjct: 159 RQRYLDMIMNPEVRADFKRRSVIVSTIRRFFEDKGFLEVETPMMHPIPGGANAKPFVTFH 218

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G    L  AP+ Y + L+  GFD  +++   FR+E       P EF  ++   ++  
Sbjct: 219 NALGVERFLRIAPELYLKRLIVGGFDAVYEMNRNFRNEGMDLTHNP-EFTSIEFYWAWHT 277

Query: 246 QDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRYG 287
             D++   E +   + ++                S  F RI Y  A+   G
Sbjct: 278 YHDLMGLTEELFNVLLDKLDMPKVIEFDGMQIDFSKPFKRITYKKALVEIG 328


>gi|327277896|ref|XP_003223699.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 559

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 68/348 (19%), Positives = 127/348 (36%), Gaps = 23/348 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            +  G  V++ GWVHR+R  G  ++F+ +RD  G  Q V + +         + +E  + 
Sbjct: 132 EAHRGERVKVFGWVHRLRRQGKNLMFIVLRDGTGYLQCVLSDELCQCYNGVVLSTESTVA 191

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G +              G  ELS    E++ +A           E    ++   R + 
Sbjct: 192 VYGTLNLVPEG----KQAPGGHELSCDFWELIGLAPAGGADNLVNEESDVDVQLNNRHMM 247

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +TL +    R+ +I S R       + E + P L  +  EG           + ++ 
Sbjct: 248 IRGETLSRIFKVRSTVIQSFRDHFFDRGYYEITPPTLVQTQVEGGSTLFKMDYFGEEAY- 306

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  +D+LN 
Sbjct: 307 -LTQSSQLYLETCIP-ALGDTFCIAQSYRAEQSRTRRHLAEYTHIEAECPFMSFEDLLNR 364

Query: 253 MENVLRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           +E+++  V +                N       F R+ Y DA+           +    
Sbjct: 365 LEDLVCDVVDRVLKSPVSELLYALNPNFEPPKRPFRRMNYTDALVWLKEHDVKKEDG-TY 423

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           +   +    +  R  +  ++       +    K     R   D R+ E
Sbjct: 424 YEFGDDIPEAPERQMTDAINEPILLCRFPAEIKSFYMQRCPEDPRLTE 471



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R   SE +L+ +  
Sbjct: 450 RFPAEIKSFYMQRCPEDPRLTESVDV-------LMPNVGEIVGGSMRIWDSEELLEGYKR 502

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 503 EGIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRHHIRDVCLYPRFVQRCK 558

Query: 571 L 571
            
Sbjct: 559 P 559


>gi|297284495|ref|XP_001104312.2| PREDICTED: lysyl-tRNA synthetase isoform 1 [Macaca mulatta]
          Length = 625

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 57/287 (19%), Positives = 115/287 (40%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 155 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFIHINNKLRRGDIIGV 212

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +   +I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 213 QGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 269

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++++  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 270 QKFIIRSKMVTYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 328

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ 
Sbjct: 329 ELYHKILVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDVMEITEKMVS 387

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          +I Y            D   P    ++ E 
Sbjct: 388 GMVKHITGSY-------KITYHPDGPEGQAYDIDFTPPFRRISMIEE 427



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 507 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 566

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG   G+DR+ M L  + N++EV LFP  +
Sbjct: 567 YGLPPTGGFGMGLDRVAMFLTDSNNIKEVLLFPAMK 602


>gi|294635625|ref|ZP_06714101.1| asparagine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291091008|gb|EFE23569.1| asparagine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 466

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 73/426 (17%), Positives = 140/426 (32%), Gaps = 62/426 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V + V + GWV   R    GI FL + D      + A  +++       V    +    G
Sbjct: 16  VDTEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPLQAVVNNSLPNYEDEV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  S   + +       EL A  I ++   E+        + +      +   L  R 
Sbjct: 72  CSVEVSGRVVASPGEGQSFELQATGIRVVGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++        +   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQAIHRYFHENGYFWVSTPLITASDTEGAGEMFRVSTLDMENLPRDA 191

Query: 189 -------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 AGKVDYNEDFFGREAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + D I    E +L+ VF+                            ++++F ++
Sbjct: 252 PEVAFADLDAIAGVAEGMLKYVFKAVLEERADDMAFFAQRVDKDAVERLQRFITSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI    +      NP+    ++ +EH  +   + F   + V    +          
Sbjct: 312 DYTDAITILESCGKQFENPVFWGVDLSSEHERYLAEQHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             R   D     A     PG+  I   +  S     +  + K L+          + ++ 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEI---IGGSQREERLDMLDKRLDE---------MGLKK 414

Query: 396 GDSCFF 401
            D  ++
Sbjct: 415 EDYWWY 420



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +++ +    +G+ K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDMLDKRLDEMGLKK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+V  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLVAYVTGVQNVRDVIPFPRTPR 462


>gi|325663723|ref|ZP_08152127.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325470216|gb|EGC73449.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 463

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 67/357 (18%), Positives = 124/357 (34%), Gaps = 51/357 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
             + + + V + GWV  +R      F+ + D       QVV +     F     +     
Sbjct: 13  REAYLDNQVTVGGWVRSIRDSKTFGFIVVNDGSFFETLQVVYHDSMDNFAEISKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A+++ I+  A     P+  +R   E +R     
Sbjct: 73  IIVKGTLVATPQ-------AKQPFEIQAEEV-IIEGASAPDYPLQKKRHSFEYLR-TISH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ I  ++        F+   TP++T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSLIAYAIHQFFQERGFVYVHTPLITGSDCEGAGEMFRVTTLDMEN 183

Query: 190 -------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+    +     Q      A  F   +   P FR E+  + R   E
Sbjct: 184 LPKNADGSVDYTKDFFNKETSLTVSGQLNAETYAQAFRNVYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSN 272
           F+ ++ E++F + DD +   E +L+ +                            N VS+
Sbjct: 244 FWMVEPEIAFADLDDDMILAEAMLKHIINYVLENAPEEMNFFNSFVDKGLLDRLHNVVSS 303

Query: 273 NFLRICYDDAIRRY--GTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
            F R+ Y +AI       DK D +    +   TEH  +    VF + + V    +  
Sbjct: 304 EFARVTYTEAIEILEKNNDKFDFKVSWGVDLQTEHERYLTEEVFKRPVFVTDYPKDI 360



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 51/150 (34%), Gaps = 24/150 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +         ++ D+P        K I      F M          ND     A  
Sbjct: 338 HERYLTEEVFKRPVFVTDYP--------KDIKA----FYMKM--------NDDNKTVAAV 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    E+  G  R    + +L+    + +  E  +          + G   H G   
Sbjct: 378 DCLVPGIGELIGGSQREDDYDKLLKRMQEMNLDPEEYQ----FYLDLRKYGSTRHAGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R VM L G  N+R+V  FP + N C+L
Sbjct: 434 GFERCVMYLTGMSNIRDVIPFPRTVNNCEL 463


>gi|126663329|ref|ZP_01734327.1| lysyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126624987|gb|EAZ95677.1| lysyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 565

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/299 (19%), Positives = 121/299 (40%), Gaps = 21/299 (7%)

Query: 7   HSCGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           H+   +  + + G  V L+G +   R  G   F++++D  G  Q+  N D  C    K++
Sbjct: 34  HTSKQVKENFEEGKKVILAGRMMSDRDMGKASFVELQDSEGRIQLYFNRDVLCPGDDKTL 93

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------ 119
            ++    +  L      E        G + +     ++LS   +       + E      
Sbjct: 94  YNQVFRKLTDLGDFIGIEGELFMTKVGAMCIRVDDFKMLSKTLKPLPLPKTDEEGHVFDA 153

Query: 120 -YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                +R++ R++DL  +   K   +KRT++  +MR       ++E  TP+L +      
Sbjct: 154 FTDPELRYRMRYVDLVVNPQVKEVFMKRTKLFTAMRTFFNEAGYMEVETPVLQSIPGGAA 213

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  
Sbjct: 214 ARPFITHHNSLDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTA 271

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY 286
           +++ +++ + + ++   EN+L     + +                 + R+   DAI+++
Sbjct: 272 MEIYVAYKDYNWMMEMTENLLEYCANQVNGTTEATFGEHKVNFKAPYARVTMTDAIKQF 330



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 5/123 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 373 EGNFIQPTFITDYPKEMSPLSKSHRDNPELTERFELMVCGKEIANAYSELNDPIDQRERF 432

Query: 509 SNVGISKEVVENRFGG-----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                  E  ++   G       RA + GMPP  G+  G+DR++M L    +++EV  FP
Sbjct: 433 EAQMALAEKGDDEANGIIDEDFLRALEYGMPPTSGLGIGMDRLIMFLTNNASIQEVLFFP 492

Query: 564 MSQ 566
             +
Sbjct: 493 QMR 495


>gi|254226645|ref|ZP_04920224.1| asparaginyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125620814|gb|EAZ49169.1| asparaginyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 418

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 124/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 31  VDSEVTVRGWIRTRRDSKAGISFLAIYDGSCFNPIQAVVPNN----LNNYDNEVLKLTTG 86

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 87  CSVEVTGKIVESPASGQAFELAASDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 146

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++  +     
Sbjct: 147 NVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 206

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                Y Q                    A    + +   P FR E+  + R   EF+ ++
Sbjct: 207 AGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNTSRHLAEFWMVE 266

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + + +    E++L+ VF+                            V ++F ++
Sbjct: 267 PEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARLEQFVESDFAQV 326

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI            P+   +   +EH        F   + V    +          
Sbjct: 327 DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHFKAPVIVKNYPKDI-----KAF 381

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 382 YMRMNEDGKTVAAMDVLAPGIGEII 406


>gi|302343542|ref|YP_003808071.1| lysyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301640155|gb|ADK85477.1| lysyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 513

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/265 (21%), Positives = 105/265 (39%), Gaps = 11/265 (4%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +  +R  G   F+ +RD  G  Q+    DS   E  +  R   V  I G+      
Sbjct: 79  IAGRIMAIRSFGKAAFVKLRDRSGQIQLHVQKDSLSPEEFELFRKLDVGDIIGV------ 132

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
           +       T ++ L  + + +++ +    LP           R++ R+LDL  +   + I
Sbjct: 133 KGALFRTKTRELTLRVEMLRLVTKSYR-SLPEKFHGLTDVEQRYRQRYLDLIMNDEVRGI 191

Query: 143 VK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
              R++I+N++R  +    F+E  TP++        AR F           Y L  AP+ 
Sbjct: 192 FTARSKIVNTIRGHLTELGFMEVETPMMQVIPGGATARPFETYHNALGMKLY-LRVAPEL 250

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  G +R F++   FR+E       P EF  L+  MS+   +D+++  E +L   
Sbjct: 251 YLKRLVVGGLERVFELNRNFRNEGISIRHNP-EFTMLEFYMSYASYEDLMSITEQMLGAC 309

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRR 285
                          +I        
Sbjct: 310 AMAVHGSLKFDYQGRQIDLTPPWEN 334



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 63/398 (15%), Positives = 125/398 (31%), Gaps = 67/398 (16%)

Query: 184 SRVNQGSFYALPQAPQQYKQ----LLMASGFDRYFQIAPCFRDEDPRSDR-LPGEFYQLD 238
            R     F+ L    Q+Y+Q    L+M       F      R +   + R    E   ++
Sbjct: 158 YRSLPEKFHGLTDVEQRYRQRYLDLIMNDEVRGIFT----ARSKIVNTIRGHLTELGFME 213

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E        ++  +             G   +  F        ++ Y    P+L    +
Sbjct: 214 VETP------MMQVIP------------GGATARPFETYHNALGMKLYLRVAPELYLKRL 255

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA- 357
           +    E          ++ +S+    E   +       +      + E  +  G   +A 
Sbjct: 256 VVGGLERVFELNRNFRNEGISIRHNPEFTMLEFYMSYASYEDLMSITE--QMLGACAMAV 313

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +   + D  G    + P  ++L+     ++             F     +   +      
Sbjct: 314 HGSLKFDYQGRQIDLTPPWENLDF--RSSLLEIGKAPP--EVLFDIEKAMNMSAHLGGQH 369

Query: 418 ---NHIAQELGII-----NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
              ++I + L  I       + ++  +I  +P                     +      
Sbjct: 370 KTGDNIGKALAKIFDVTVEPHLWQPTFITGYP---------------------RDISPLS 408

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           + NDL      +++    G E+ +G    +  +   + F      +E  ++         
Sbjct: 409 RTNDLDPDIVDRFEFFIAGREMGNGFSELNDPDDQRERFFAQVAEREAGDDEAQFMDADY 468

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA + GMPP  G   GIDR+VMLL    ++REV LFP
Sbjct: 469 VRALEYGMPPTAGEGVGIDRLVMLLTDQPSIREVILFP 506


>gi|291551155|emb|CBL27417.1| asparaginyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 463

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 127/376 (33%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
             + +   V + GW+  +R      F+ + D       Q+V +     F     +     
Sbjct: 13  REAYLDKEVTVGGWIRSIRDSKTFGFIVLNDGSYFDTLQIVYHDKMENFAEVSKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A+++ I   +     P+  +R   E +R     
Sbjct: 73  IIVKGTLVATPQ-------AKQPFEIQAEEVVIEGASAPDY-PLQKKRHSFEYLR-TISH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++        F+   TP++T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSLAAYAIHQFFQDRGFVYVHTPLITGSDCEGAGEMFRVTTLDMDN 183

Query: 190 -------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+    +     Q      A  F   +   P FR E+  + R   E
Sbjct: 184 VPKNEDGTVDYTQDFFGKETSLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSN 272
           F+ ++ E++F + +D +   E +L+ V                            N V++
Sbjct: 244 FWMIEPEIAFADLEDDMELAEAMLKYVINYVLENAAEEMNFFNSFVDKGLLDRLHNVVNS 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           +F R+ Y +A+     +       +       TEH  +   +V+ + + V    +     
Sbjct: 304 DFARVTYTEAVEILEKNNDKFDYKVSWGCDLQTEHERYLTEQVYKRPVFVTDYPKEI--- 360

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  +MNE
Sbjct: 361 -------KAFYMKMNE 369



 Score = 84.0 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 49/139 (35%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K        F M                 A    LV    EI 
Sbjct: 349 RPVFVTDYP-----KEIK-------AFYMKMNED--------GKTVAAVDCLVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + +L     +G+     E  +G      + G   H G   G +R VM L G
Sbjct: 389 GGSQREDDYDKLLGRMKELGLK----EEDYGFYLDLRKYGSTRHAGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N C+L
Sbjct: 445 MSNIRDVIPFPRTVNNCEL 463


>gi|228900806|ref|ZP_04065021.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL
           4222]
 gi|228858732|gb|EEN03177.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL
           4222]
          Length = 419

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 66/265 (24%), Positives = 124/265 (46%), Gaps = 15/265 (5%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
              G  V L GWV ++R  G + FL +RD  G+ Q V     A +     V  E V+ + 
Sbjct: 2   EQSGKVVLLQGWVKKIRHLGNVSFLLLRDRTGVIQCVLENGLAGY----KVDVESVVHVI 57

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPESIRFKYRFLDL 133
           G ++  S   +        +E+ A ++++++ AE LP  +  ++           R + L
Sbjct: 58  GEIVETSKTEL-------GVEVLAHEVKVINGAEPLPFEINKKKLQVGLDQLLNERVISL 110

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +        ++ ++ S    +I  +F    TP + +   EG  +        + ++ A
Sbjct: 111 RHERTAAIFKVKSTLVQSFSEILIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAYLA 170

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNT 252
             Q+PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+E+ F+ +  +++  
Sbjct: 171 --QSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYEVMQL 228

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRI 277
             +VLR +F++ +    +    L+I
Sbjct: 229 ETDVLRYMFQQVAKKCEIELQLLQI 253



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TM      ++  
Sbjct: 284 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTMQNKENPAITD 332

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+       +F      F+ 
Sbjct: 333 S---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----EKFQSYLNTFRY 379

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++RIV  LL   NVRE S FP  
Sbjct: 380 GCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 413


>gi|168274342|dbj|BAG09591.1| lysyl-tRNA synthetase [synthetic construct]
          Length = 597

 Score =  179 bits (455), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/287 (20%), Positives = 115/287 (40%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 127 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFIHINNKLRRGDIIGV 184

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +   +I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 185 QGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 241

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 242 QKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 300

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ 
Sbjct: 301 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMVS 359

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          ++ Y            D   P    N+ E 
Sbjct: 360 GMVKHITGSY-------KVTYHPDGPEGQAYDVDFTPPFRRINMVEE 399



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 479 KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 538

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 539 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMK 574


>gi|227494365|ref|ZP_03924681.1| lysyl-tRNA synthetase [Actinomyces coleocanis DSM 15436]
 gi|226832099|gb|EEH64482.1| lysyl-tRNA synthetase [Actinomyces coleocanis DSM 15436]
          Length = 1084

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 71/335 (21%), Positives = 137/335 (40%), Gaps = 26/335 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R    G++  +  G+ VR +G V   R HGG+IFLD++D  G  Q++A+      +  + 
Sbjct: 627 RDQRVGEVISASPGTSVRCAGRVVARRDHGGVIFLDVQDWTGTVQLLASAAQVGADTMRI 686

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R +  +            + N     G   +  +  +I S A + P+P   +    E +
Sbjct: 687 LRRDLSIGDHLGFWGAVGTSAN-----GTFSVLLEGAQITSKALQ-PIPALWQGLTDEQM 740

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV 182
           + + R+LDL  + + +  V+ R+++I S+R  ++ + F+E  TP+L T      AR F  
Sbjct: 741 KVRRRYLDLIVNPVARERVRVRSQVIQSIRQTLLDDTFLEVETPLLQTIHGGANARPFRT 800

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y L  AP+ Y + LM  G DR F+I   FR+E   +   P EF  L+   +
Sbjct: 801 YINAYNLDLY-LRIAPELYLKRLMVGGADRVFEIGRNFRNEGADATHNP-EFTMLEAYQA 858

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNN--------------FLRICYDDAIRRYGT 288
           + + + +    + ++    +       +                 +  I     I     
Sbjct: 859 YGDYNSMRELTQRIIVNAAKTALGTTVIRGMASDGQIHEVDLAQPWRVITVHQGIAEACG 918

Query: 289 DKPDLRNPI--IMHNVTEHFVHSEFRVFSKILSVN 321
               +  P+  ++    EH +  +  +    L ++
Sbjct: 919 RDVTVDTPVSELLEIAAEHGLEVDPGISRGQLILD 953


>gi|332292279|ref|YP_004430888.1| lysyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170365|gb|AEE19620.1| lysyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 564

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/309 (21%), Positives = 117/309 (37%), Gaps = 11/309 (3%)

Query: 6   THSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           THS    +G    G  V ++G + R +  G   F +I+D  G  Q+  N D  C    KS
Sbjct: 33  THSSKQAIGNYKEGEKVVMAGRLMRKKIQGSASFGEIQDGEGRIQLYFNRDEICPGEDKS 92

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----- 119
             +E    +  L      E        G+I +S     +LS A +       + E     
Sbjct: 93  HYNEVFKKLLDLGDFIGVEGTLFTTQVGEITVSLTGFTLLSKALKPLPLPKTDAEGNTYD 152

Query: 120 --YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                 +R++ R+ DL  +   K   VKRT++ N+MR       + E  TPIL   +   
Sbjct: 153 EFIDPEMRYRQRYADLAVNPHVKEVFVKRTKLFNAMRNFFNNAGYFEVETPILQPIAGGA 212

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A    V    +      +  A + Y + L+  GF+  ++ +  FR+E       P EF  
Sbjct: 213 AARPFVTHHNSLDMPLYMRIANELYLKRLIVGGFEGVYEFSKNFRNEGMDRTHNP-EFTA 271

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT-DKPDLRN 295
           +++ +++ + + ++   E +L       +     +     + +     R    D      
Sbjct: 272 MEIYVAYKDYNWMMEFCEQLLEHCAMAVNGTTKATFGEHEVDFKAPYARVTMADSIKHFT 331

Query: 296 PIIMHNVTE 304
              + + TE
Sbjct: 332 GFDILDKTE 340



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 8/131 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 373 EGNYIQPTYITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSELNDPIDQRERF 432

Query: 509 SNVGISKEVVENRF-----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                  +  ++           R+ + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 433 EAQLELAKRGDDEATASIDYDFLRSLEYGMPPTSGMGIGMDRLIMFLTNNQSIQEVLFFP 492

Query: 564 MS---QNFCDL 571
                +   DL
Sbjct: 493 QMKPEKKALDL 503


>gi|225377738|ref|ZP_03754959.1| hypothetical protein ROSEINA2194_03389 [Roseburia inulinivorans DSM
           16841]
 gi|225210415|gb|EEG92769.1| hypothetical protein ROSEINA2194_03389 [Roseburia inulinivorans DSM
           16841]
          Length = 471

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 117/351 (33%), Gaps = 51/351 (14%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVLC 72
             V   + + GWV  +R      F+ + D      V    +     FE  + +     + 
Sbjct: 23  EYVDQTIAIGGWVRNIRNSKNFGFIVVNDGTFFEPVQVVYSDVLENFEEVEKLNVGAAII 82

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G +++               E+ A+K+E+   +         ++++          L 
Sbjct: 83  VTGKLVATPG-------TKQPFEIQAEKVEVEGPSTPDYPLQ--KKKHSFEYLRTISHLR 133

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R +T       R+    ++       +F+   TP++T S  EGA +    + ++     
Sbjct: 134 PRTNTFEAVFRVRSLCAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDMNNLP 193

Query: 190 -----------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+  P       Q      A  F   +   P FR E+  + R   EF+
Sbjct: 194 MTEDGKVDYSKDFFNKPTNLTVSGQLNGETYAMAFKNIYTFGPTFRAENSNTTRHAAEFW 253

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F + +D +   E++L+ V                            +  +++F
Sbjct: 254 MIEPEIAFADLEDDMILAESMLKYVINYVLENAPEEMAFFNSFIDKGLLERLQHVANSDF 313

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
            R+ Y +A+     +       +       TEH  +   +VF + + V   
Sbjct: 314 ARVTYTEAVEILEKNNDKFDYKVSWGCDLQTEHERYLTEQVFKRPVFVTDY 364



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 50/139 (35%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P                 F M           D  ++ A    LV    EI 
Sbjct: 357 RPVFVTDYPM------------EIKAFYMK-------LNPDGKTVAAVDC-LVPGIGEII 396

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    E +L   + +G+     E  +G      + G   H G   G +R VM L G
Sbjct: 397 GGSQREDDYEKLLARINELGLK----EEDYGFYLDLRKYGSARHAGFGLGFERCVMYLTG 452

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N C+L
Sbjct: 453 MSNIRDVIPFPRTVNNCEL 471


>gi|255322433|ref|ZP_05363578.1| lysyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300341|gb|EET79613.1| lysyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 501

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/316 (18%), Positives = 125/316 (39%), Gaps = 12/316 (3%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H       S  G  V L+G V  +R  G  IF +I D  G  Q+  +  +      K V+
Sbjct: 45  HIIDTEEKSAEGQLVSLAGRVKLIRDAGKAIFANIEDEDGNLQIYFSNKTLDPNWFKVVK 104

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               + +  ++  R          TG+  +   ++ + S A   PLP           R+
Sbjct: 105 KN--IEVGDIIYVRG---YAFVTRTGEFSMHVSELTLASKAIS-PLPEKFHGLTDIETRY 158

Query: 127 KYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LD+  +  +  +  +R+ I++++R     + F+E  TP++            V   
Sbjct: 159 RQRYLDMIMNPEVRADFKRRSVIVSTIRRFFEDKGFLEVETPMMHPIPGGANAKPFVTFH 218

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G    L  AP+ Y + L+  GFD  +++   FR+E       P EF  ++   ++  
Sbjct: 219 NALGVERFLRIAPELYLKRLIVGGFDAVYEMNRNFRNEGMDLTHNP-EFTSIEFYWAWHT 277

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
             D++   E +   + ++      +  + ++I +    +R        +  + +  + E 
Sbjct: 278 YHDLMGLTEELFNVLLDKLDMPKIIEFDGMQIDFSKPFKRISYK----KALVEIGGLDEA 333

Query: 306 FVHSEFRVFSKILSVN 321
            +  + ++ +K+ +  
Sbjct: 334 IIGDKDKILAKLKADG 349


>gi|182420037|ref|ZP_02951271.1| asparaginyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669571|ref|ZP_04529551.1| asparagine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376074|gb|EDT73661.1| asparaginyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655015|gb|EEP52575.1| asparagine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 464

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 70/384 (18%), Positives = 125/384 (32%), Gaps = 56/384 (14%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             V +SGW+  +R      F++I D       Q+V +     F+    +     L I G 
Sbjct: 20  KDVTISGWIRTLRASNAFGFIEINDGSFFKNIQIVFDEKLDNFKEISKLPISSSLTITGT 79

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +++               E+ A++I I  ++     P+  +R   E +R     L  R +
Sbjct: 80  LVATPD-------AKQPFEVQAKEIIIEGMSNSDY-PLQKKRHTFEYLR-SIAHLRPRSN 130

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------- 189
                   R+    ++      +NF+   TPI+T S  EGA +    + ++         
Sbjct: 131 AFSATFRVRSVAAYAIHKFFQEQNFVYTHTPIITGSDCEGAGEMFRVTTLDPKTPELTKE 190

Query: 190 -------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+          Q      A  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 191 GNVDYTKDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSNTTRHAAEFWMIEP 250

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RIC 278
           E++F +  D +   E +L+ V +   +       F                      R+ 
Sbjct: 251 EIAFADLQDDMELAEAMLKYVIQYVIDECPEEMQFFNSFVDKGLLERLNHVVSSDFARVT 310

Query: 279 YDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
           Y +A+        +   P+   +   TEH  +     F K L V    +           
Sbjct: 311 YTEAVEILEKCGKEFDYPVSWGIDLQTEHERYLTEEHFKKPLFVTDYPKDI-----KAFY 365

Query: 337 NRAFCDRMNEWARSQGQPGLAYIF 360
            R   D     A     PG+  I 
Sbjct: 366 MRMNDDNKTVAATDLLVPGIGEII 389



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 26/146 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P        K I      F M           D  ++ A  
Sbjct: 339 HERYLTEEHFKKPLFVTDYP--------KDIKA----FYMRMND-------DNKTVAAT- 378

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  EI  G  R    +V+    + +G+     +  +       + G   H G  
Sbjct: 379 -DLLVPGIGEIIGGSQREERLDVLEARMAELGL----AKEDYWWYLELRKYGETKHAGFG 433

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G +R++M + G  N+R+V  FP + 
Sbjct: 434 LGFERLIMYITGMTNIRDVIPFPRTP 459


>gi|296123699|ref|YP_003631477.1| asparaginyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296016039|gb|ADG69278.1| asparaginyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 475

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/301 (19%), Positives = 106/301 (35%), Gaps = 32/301 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           M   RT     L  +  G+ V + GWV   R    G  F+++ D      +    D +  
Sbjct: 1   MPAMRTKVADCLKKTAPGTIVDVRGWVRTRRESKQGFAFIELNDGSSFANLQIVADKSLP 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  + ++    L   G  ++ + E   +     ++EL A+ + +L  A+    P+  +  
Sbjct: 61  DYEELIK----LVQTGASLAVTGELKESPAQGQKVELHARTLRVLGQADAAKYPLQKKGH 116

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R K   L  R +T       R  I +++        F+    PI+T S  EGA  
Sbjct: 117 SFEFLREK-AHLRPRTNTFGAMARVRNAICDAIHRYFQDRGFLYIHAPIITTSDCEGAGH 175

Query: 180 FLVPSRVNQ-----------------------GSFYAL---PQAPQQYKQLLMASGFDRY 213
               + ++                          F+          Q +  + A      
Sbjct: 176 MFQVTTLDLAKLGQLQGSRSSEAGKPFEIDYTKDFFGKKAGLTVSGQLEGEIFACSVGDC 235

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +   P FR E+  + R   EF+ ++ EM F E +D +   E+ +R V +           
Sbjct: 236 YTFGPTFRAENSNTTRHLAEFWMIEPEMPFYELEDNMALAEDFVRSVIKNVLARCPDDLQ 295

Query: 274 F 274
           F
Sbjct: 296 F 296



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 4/102 (3%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND          LV    EI  G  R    EV++      G++              
Sbjct: 377 MRANDDGKTVRAMDVLVPGIGEIIGGSQREERHEVLISRMQECGLNPADYW----WYLEL 432

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            + G  PH G   G++R V ++ G +N+R+   FP +    D
Sbjct: 433 REYGTVPHSGFGLGLERTVQMITGMQNIRDCIPFPRTPKSAD 474


>gi|213961690|ref|ZP_03389956.1| lysyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213955479|gb|EEB66795.1| lysyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 562

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/289 (20%), Positives = 113/289 (39%), Gaps = 20/289 (6%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           + G  V ++G +  +R  G   F  ++D  G  Q+  N D  C    K++ +E    +  
Sbjct: 43  EEGKQVVVAGRLMSLRVQGKASFATLQDSEGTMQLYFNRDEMCPGEDKTLYNEVFKKLLD 102

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKY 128
           L      E        G+  ++ +   +LS           + +            R++ 
Sbjct: 103 LGDFIGVEGYLFITKMGEKTVAVKNFTLLSKVLRPLPMPKVDADGKVHDAFTDPEQRYRM 162

Query: 129 RFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R++DL  +   K   +KRT++ N+MR       ++E  TP+L A      AR F+     
Sbjct: 163 RYVDLVVNPHVKEVFIKRTKLFNAMRQFFNDAGYLEVETPVLQAIPGGASARPFITHHNA 222

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ + 
Sbjct: 223 LDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKDY 280

Query: 247 DDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY 286
             ++N  E +L       +                 + R+   DAI+ +
Sbjct: 281 HWMMNFTERLLEHCAMAVNGTTKATFGKHEVDFKAPYPRVTMTDAIKHF 329



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 372 EGNFIQPTFITDYPKEMSPLTKEHRDNPALTERFELMVCGKEIANAYSELNDPIDQRERF 431

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  E  ++          RA + GMPP  G+  G+DR++M L   ++++EV  FP 
Sbjct: 432 EEQLRLSEKGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLIMFLTNNESIQEVLFFPQ 491

Query: 565 SQ 566
            +
Sbjct: 492 MR 493


>gi|194272210|ref|NP_001123561.1| lysyl-tRNA synthetase isoform 1 [Homo sapiens]
 gi|119616028|gb|EAW95622.1| lysyl-tRNA synthetase, isoform CRA_d [Homo sapiens]
 gi|119616030|gb|EAW95624.1| lysyl-tRNA synthetase, isoform CRA_d [Homo sapiens]
          Length = 625

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/287 (20%), Positives = 115/287 (40%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 155 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFIHINNKLRRGDIIGV 212

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +   +I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 213 QGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 269

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 270 QKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 328

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ 
Sbjct: 329 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMVS 387

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          ++ Y            D   P    N+ E 
Sbjct: 388 GMVKHITGSY-------KVTYHPDGPEGQAYDVDFTPPFRRINMVEE 427



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 507 KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 566

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 567 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMK 602


>gi|212709816|ref|ZP_03317944.1| hypothetical protein PROVALCAL_00864 [Providencia alcalifaciens DSM
           30120]
 gi|212687627|gb|EEB47155.1| hypothetical protein PROVALCAL_00864 [Providencia alcalifaciens DSM
           30120]
          Length = 466

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 74/385 (19%), Positives = 130/385 (33%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VGS V + GWV   R    G  FL + D      + A  ++        V    +    G
Sbjct: 16  VGSEVTVQGWVRTRRDSKAGFSFLAVYDGSCFNPLQAIINNNLSNYNDEV----LHLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  +     +       EL A  I+++   E+        + +      +   L  R 
Sbjct: 72  CSVEVTGVVTESQGQGQSFELQATAIKVVGWVEDPDTYPMAAKRHSVEFLREAAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDYNNLPRND 191

Query: 190 --------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      A+   + +   P FR E+  + R   EF+ L+
Sbjct: 192 KGEVDFSEDFFGREAFLTVSGQLNGEAYATALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVF-------------------EEFSNG--NTVSNNFLRI 277
            E++F   DDI    E +L+  F                   ++  N     V+++F ++
Sbjct: 252 PEVAFANLDDIAGLAEKMLKYAFKAALTERRDDLEFFAERVDKDVINRLERFVNSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI+   T      NP+    ++ +EH  +   + F   + V    +          
Sbjct: 312 DYTDAIKILETCGQKFENPVYWGVDMSSEHERYLAEQHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    + +      +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDRLDARLEEMGMNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G  NVREV  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVSNVREVIPFPRTPR 462


>gi|241206404|ref|YP_002977500.1| lysyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860294|gb|ACS57961.1| lysyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 498

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/292 (20%), Positives = 119/292 (40%), Gaps = 20/292 (6%)

Query: 2   HRYRTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           H +RT +  +L                V ++G V+  R  G  +F+DI D  G  Q+ ++
Sbjct: 36  HFHRTMTNAELIAKYENLESDVETQDVVIVAGRVYSSRNSG--MFMDIHDAGGKIQIFSH 93

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            D+   E    +    +  I G+        I      G++ ++AQ I +L+ +  LP+P
Sbjct: 94  KDTTPEEARALLPMIDIGDIIGV------TGIVRRTKRGELTINAQTITMLTKSL-LPMP 146

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                     +R++ R LD+  +   K    +R++I++ +R  M  + F+E  TP+L + 
Sbjct: 147 EKWHGLSDIELRYRKRHLDIMTNEDSKLRFQQRSKILSGIRRFMENDGFMEVETPMLHSV 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLP 231
                 +              L  AP+ + +  + SG  D+ F+I   FR+E   +   P
Sbjct: 207 YGGATAEPFKTHHNTLKLDMYLRIAPELFLKRTLVSGLTDKVFEINRNFRNEGVSTRHNP 266

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
            EF  ++   ++ + +DI++ +E +   +                + +    
Sbjct: 267 -EFTMMECYWAYADYEDIMDLVERLFESLALSIHGATEFPFGDKTMSFKGPF 317



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 7/133 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMS 501
           +E   E   I  +H   T     +           +   +++  CN +E+ +     +  
Sbjct: 368 FEEKVESTLIQPSH--VTHFPKDISPFAKEVPGEPRLVERFETYCNAWELGNAFSELNDP 425

Query: 502 EVMLQAFSNVGISKEVVENR----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   +              +          A   GMPP GG+  G+DR++MLL  A ++R
Sbjct: 426 EEQRRRMVEQLEQAHARGEKEKQLDEEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIR 485

Query: 558 EVSLFPMSQNFCD 570
           +V LFP  +N  D
Sbjct: 486 DVILFPARRNKAD 498


>gi|5031815|ref|NP_005539.1| lysyl-tRNA synthetase isoform 2 [Homo sapiens]
 gi|20178333|sp|Q15046|SYK_HUMAN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|2366752|dbj|BAA22084.1| Lysyl tRNA Synthetase [Homo sapiens]
 gi|13278705|gb|AAH04132.1| Lysyl-tRNA synthetase [Homo sapiens]
 gi|119616026|gb|EAW95620.1| lysyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
 gi|123982972|gb|ABM83227.1| lysyl-tRNA synthetase [synthetic construct]
 gi|123997649|gb|ABM86426.1| lysyl-tRNA synthetase [synthetic construct]
          Length = 597

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/287 (20%), Positives = 115/287 (40%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 127 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFIHINNKLRRGDIIGV 184

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +   +I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 185 QGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 241

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 242 QKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 300

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ 
Sbjct: 301 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMVS 359

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          ++ Y            D   P    N+ E 
Sbjct: 360 GMVKHITGSY-------KVTYHPDGPEGQAYDVDFTPPFRRINMVEE 399



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 479 KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 538

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 539 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMK 574


>gi|15789697|ref|NP_279521.1| aspartyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169235411|ref|YP_001688611.1| aspartate--tRNA ligase [Halobacterium salinarum R1]
 gi|3122880|sp|O07683|SYD_HALSA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2209068|dbj|BAA20527.1| aspartyl-tRNA synthetase [Halobacterium salinarum]
 gi|10580067|gb|AAG19001.1| aspartyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167726477|emb|CAP13262.1| aspartate--tRNA ligase [Halobacterium salinarum R1]
          Length = 436

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 26/294 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIA 62
           RT    D+   D G    ++G VH +R  GGI+F+ +RD  G  QVVA  D     FE A
Sbjct: 4   RT-YIEDVTPDDDGEDTTIAGHVHELRDLGGILFVIVRDATGRLQVVAKEDDTPDLFETA 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYP 121
           + + SE V+ + G + +       ++   G +EL+  ++ ++S A +   + +  + +  
Sbjct: 63  EGLSSEDVVQVTGTLEA-------SDQAPGGVELAPTELTVVSEATDVPSIEISKDVDAD 115

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            S R   R LD+R+ +       R++ + +M        F E  TP L+ +  EG  D  
Sbjct: 116 LSTRLDERHLDVRKPSTKAVFSLRSKAMGAMTDWFYDNRFEEVDTPELSTAGAEGGADLF 175

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                ++ ++  L Q+PQ YKQ+L+ASG DR F++   FR ED  + R   E    D+E+
Sbjct: 176 PVVYYDKEAY--LSQSPQLYKQILVASGVDRLFEVGHAFRAEDFGTSRHVSEIAMFDVEL 233

Query: 242 SFV-EQDDILNTMENVLRGVFEEFSNGNT------------VSNNFLRICYDDA 282
            +V +  D+++  E  LR                          +F RI +++A
Sbjct: 234 GYVEDHHDVMDVQEESLRHTIRHVVEHAQRELDELGSDLSVPEADFPRITFEEA 287



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 6/157 (3%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           +AR  +A E   +  +  +     +    E+ EE+     A      P       +  D 
Sbjct: 286 EAREILADEYDHVPEDDNDLDTKGERLLGEYFEEQGH--PAVFVVGYPDEKFYYRQDVDG 343

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             + + ++DL+  G E++SGG R H  E +       G+        F     AF+ G+P
Sbjct: 344 DDVASRKFDLLYRGQELSSGGQREHDIERLTAKMREQGVEP----ENFEFYLDAFRYGVP 399

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PHGG   GIDR++  L G  N++E  LFP   +  + 
Sbjct: 400 PHGGYGLGIDRLIQQLAGLDNIKEAILFPRDPDRLEP 436


>gi|260589025|ref|ZP_05854938.1| asparagine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540804|gb|EEX21373.1| asparagine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 463

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 55/281 (19%), Positives = 99/281 (35%), Gaps = 28/281 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   V + GWV  VR      F+ + D       QVV +     F+    +     
Sbjct: 13  REEYLDKEVTVGGWVRSVRDSKTFGFIVLHDGSFFETLQVVYHDTMENFQAISKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A +I +   +     P+  +R   E +R     
Sbjct: 73  IVVKGTLVATPQ-------AKQPFEIQATEIMVEGDS-AADYPLQKKRHSMEYLR-TISH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ I  ++      + F+   TP++T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSLIAYAIHQFFQEQGFVYVHTPLITGSDCEGAGEMFQVTTMDLND 183

Query: 190 -------------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+  P       Q      A  F   +   P FR E+  + R   E
Sbjct: 184 IPKTEEGKVDFSQDFFKKPTNLTVSGQLNGETFAQAFRNIYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           F+ ++ EM+F + DD +   E++L+ V            NF
Sbjct: 244 FWMIEPEMAFSDLDDNMALAESMLKYVIRYVLENAPEEMNF 284



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 51/139 (36%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K        F M Q               A    LV    EI 
Sbjct: 349 RPVFVTDYP-----KEIK-------AFYMKQNED--------GKTVAAMDCLVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    E + Q    + ++    E  +G      + G   H G   G +R VM L G
Sbjct: 389 GGSQREDSYEKLSQRMKEMNLN----EEDYGFYLDLRKYGSTRHSGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
            +N+R+V  FP + N C+L
Sbjct: 445 MQNIRDVIPFPRTVNNCEL 463


>gi|313207030|ref|YP_004046207.1| asparaginyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312446346|gb|ADQ82701.1| asparaginyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315022576|gb|EFT35603.1| asparaginyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325335533|gb|ADZ11807.1| Aspartyl/asparaginyl-tRNA synthetase [Riemerella anatipestifer
           RA-GD]
          Length = 482

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 88/574 (15%), Positives = 178/574 (31%), Gaps = 143/574 (24%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSEWVLCIDGLVM 78
           + + GWV   R +    F+ + D   +  +    D   F  EI K++ +   L + G V+
Sbjct: 21  ITIEGWVRAFRSNR---FIALNDGSTLNNLQIVVDFEKFDDEIIKNIHTASSLKVTGEVV 77

Query: 79  SRSAETINANIITGQIELSAQKIEIL--SVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                  +       +E+ A+KIE+L  +++EEL   +   + +      +   L  R +
Sbjct: 78  ESQGAGQS-------VEIIAKKIELLGENLSEELQSTILQPKRHTLEKLREQAHLRFRTN 130

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------- 189
                   R+ +  ++        F   +TPI+T +  EGA +    S  +         
Sbjct: 131 LFGAVFRVRSAVSFAIHQFFNQNQFFYINTPIITGADAEGAGEMFGVSNFDLNKVPKNED 190

Query: 190 -------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+          Q +    A G  R +   P FR E+  +        +   
Sbjct: 191 GEVDYTQDFFGKKTNLTVSGQLEAETAAMGLGRVYTFGPTFRAENSNT-------TRHLA 243

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E   VE +             F    +   ++ +FL+                       
Sbjct: 244 EFWMVEPE-----------VAFNNLEDNIDLAESFLKYVIQY------------------ 274

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY- 358
             V +H       +  +               +G        +++    + +    ++Y 
Sbjct: 275 --VLDHCKDDLELLDKRFAEEQKQKPEKDRAKEG------LIEKLENVVKKRF-KRVSYT 325

Query: 359 ----IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
               I     ++       PV K    + +E                             
Sbjct: 326 EAIEILLNSKDNKKGKFQFPVEKWGADLQSE----------------------------- 356

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
                   E  ++  +      ++    +++ +E K        F M           D 
Sbjct: 357 -------HERYLVEKHFECP--VV---LFDYPKEIK-------AFYMR-------LNEDQ 390

Query: 475 LSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
            ++ A   D++  G  EI  G  R    EV+ Q  +++ + +  +           + G 
Sbjct: 391 KTVAAM--DVLFPGIGEIIGGSQREERLEVLKQKMADMNVDEHELW----WYLDTRKFGS 444

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            PH G   G++R+V+ + G  N+R+V  FP +  
Sbjct: 445 VPHAGFGLGLERLVLFVTGMTNIRDVIPFPRTPK 478


>gi|328770381|gb|EGF80423.1| hypothetical protein BATDEDRAFT_19596 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 577

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/306 (18%), Positives = 127/306 (41%), Gaps = 15/306 (4%)

Query: 17  VGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V + V ++G +H +R    G+IF D++      Q++A+      +  +       L   G
Sbjct: 112 VDTEVTVAGRIHNIRTQSKGLIFYDLQAEGCKIQIMASSQ----DSERDFVQVHSLLHRG 167

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++             G++ +  + I +L+    + LP        + +R++ R+LDL  
Sbjct: 168 DMVGVRG--CAGRSKRGELSMFPKDIVLLAPCLRM-LPTSHYGFKDQEMRYRMRYLDLIM 224

Query: 136 DTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           +   ++ ++ R++IIN +R  + ++ F+E  TP++   +        V    +      +
Sbjct: 225 NQHVRDKMITRSKIINYLRRFLDSKGFLEVETPMMNMIAGGATAKPFVTHHNDLNMDLFM 284

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ + + L+  G DR ++I   FR+E       P EF   +  M++ +  D+++  E
Sbjct: 285 RIAPELFLKQLIVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADVHDLMSMTE 343

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
             L G+ +  + G  +  +  +   D A       + D   P    ++ +        VF
Sbjct: 344 AFLSGLVKTLTGGYKIKYH-PQGIADGAPEW----EIDFTPPFRRVSMIDELERVLECVF 398

Query: 315 SKILSV 320
                +
Sbjct: 399 PAAADL 404



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 4/109 (3%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++      EI +     +        F      K   ++           A +
Sbjct: 469 RPGLCERFECFVATKEICNAYTELNDPFDQRARFEQQAADKAAGDDEAQLVDETFCNALE 528

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
            G+PP GG   G+DR+ M L  + N++EV  FP  +        + + +
Sbjct: 529 YGLPPTGGWGLGLDRLTMFLTDSNNIKEVLPFPAMKPETPAEANARAEI 577


>gi|300857330|ref|YP_003782314.1| asparaginyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300437445|gb|ADK17212.1| asparaginyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 463

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 74/390 (18%), Positives = 129/390 (33%), Gaps = 56/390 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               V   +++SGW+  +R      F+++ D       Q+V +     F+    +     
Sbjct: 13  TEKFVNKDIKISGWIRTLRDSKSFGFIELNDGSFFKNIQIVFDEKLPNFKELTKLAISSS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L I+G ++       NA       E+ A++I +   +     P+  +R   E +R     
Sbjct: 73  LSIEGTLVLTP----NAKQP---FEIQAKEITLEGNSSSDY-PLQKKRHTLEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++        F+  +TP++T S  EGA +    + ++   
Sbjct: 124 LRSRSNTFSAVFRVRSIAAYAVHKFFQERGFVYANTPLITGSDCEGAGEMFKVTSMDLNN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q     MA  F   +   P FR ED  + R   E
Sbjct: 184 IPKKEDGSVDYSKDFFGKETNLTVSGQLSAETMALAFRNVYTFGPTFRAEDSNTARHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ EM+F E  D ++  E +++ V             F                   
Sbjct: 244 FWMIEPEMAFAELKDYMDVAEELVKYVINYVLENAPEEMAFFNSFIDKTLFSRLDNVANS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              RI Y +A+            P+   +   TEH  +   +VF K     P +      
Sbjct: 304 EFGRITYTEAVDILKKSGASFEYPVEWGIDLQTEHERYLTEKVFKK-----PIFVTDYPK 358

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           A      R   D     A     PG+  I 
Sbjct: 359 AIKAFYMRENEDGKTVAAADLLVPGVGEII 388



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 50/149 (33%), Gaps = 24/149 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +  ++ D+P             A   F M +               A  
Sbjct: 338 HERYLTEKVFKKPIFVTDYP------------KAIKAFYMRENED--------GKTVAAA 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    +V+ +    +G++K+             + G   H G   
Sbjct: 378 DLLVPGVGEIIGGSQREERYKVLEKRIEELGLNKKDYW----WYLELRKYGETKHSGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G +RI+M + G  N+R+V  FP +    +
Sbjct: 434 GFERILMYITGMSNIRDVIPFPRTTGSAE 462


>gi|294784425|ref|ZP_06749716.1| asparagine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294487997|gb|EFG35352.1| asparagine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 461

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 69/390 (17%), Positives = 125/390 (32%), Gaps = 56/390 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
           G   +   + L GWV ++R      F+++ D       Q+V       F+    +     
Sbjct: 11  GEDYLDKEIELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSISST 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++               +E+ A KIEI   A+ L  P+  +R   E +R K   
Sbjct: 71  IKVKGTLVKSQGSG-------QDLEVKADKIEIFQKAD-LEYPLQNKRHTFEYLRTK-AH 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++       NF+   TPI+T S  EGA +    + ++   
Sbjct: 122 LRARTNTFSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEMFRVTTLDMNK 181

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       + F   +   P FR E   + R   E
Sbjct: 182 LPKKENGEIDFTKDFFGKSTNLTVSGQLNVETFCAAFRNVYTFGPTFRAEYSNTARHASE 241

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +    +   E +++ V +   +       F                   
Sbjct: 242 FWMVEPEIAFADLSANMELAEAMVKFVIKYVMDTCPEEMEFFNSFIEKGLFDKLNNVLNN 301

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+   +   +EH  +     F K     P +      
Sbjct: 302 DFGRVTYTEAIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYFKK-----PVFVTDYPK 356

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                  +   D     A     PG+  I 
Sbjct: 357 EIKAFYMKLNEDGKTVRAMDLLAPGIGEII 386



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P     +E K        F M           D  +++A   DL+  G  EI
Sbjct: 347 KPVFVTDYP-----KEIK-------AFYMK-------LNEDGKTVRAM--DLLAPGIGEI 385

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    E++L     +G+ K      +       + G  PH G   G +R++M L 
Sbjct: 386 IGGSQREDSYEILLNRMKELGLDK----ESYEFYLDLRRFGSFPHSGYGLGFERMMMYLT 441

Query: 552 GAKNVREVSLFPMSQN 567
           G +N+R+V  FP + N
Sbjct: 442 GMQNIRDVIPFPRTPN 457


>gi|268609394|ref|ZP_06143121.1| asparaginyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 472

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/345 (18%), Positives = 123/345 (35%), Gaps = 48/345 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V   V + GWV   R    + F+++ D   +  +    +    +  K  R    L + G 
Sbjct: 32  VDKEVTVCGWVRTSRNSKSVAFIELNDGTSLKNIQVVVEKGDSD-YKEPRVGMSLKVTG- 89

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                 + +     T +I    + I IL  A     P+  +    E +R     L  R +
Sbjct: 90  ------KAVAGRNNTVEINAVPENITILGDA-PTDYPLQKKGHTLEFLR-TIPHLRGRTN 141

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-------- 188
           T +     R+ + +++     + N++  +TP++T S  EGA +    + +          
Sbjct: 142 TFNAVWRVRSILASAIHEYFQSHNYVYINTPLITGSDCEGAGEMFQVTTIGYSNEYKSEE 201

Query: 189 ----GSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 F+          Q +  + A    + +   P FR E+  + +   EF+ ++ E+
Sbjct: 202 DYYANDFFGKRAGLSVSGQLEGEMAAMAMGKIYTFGPSFRAENSNTPKHLAEFWHIEPEV 261

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RICYD 280
           +F+E DD++   E++L+ V  +          F                      R+ Y 
Sbjct: 262 AFMELDDVIELAEDMLKFVIGKLLKTCPDEIAFFDAHFEKGLKARLEELISHDFGRVTYT 321

Query: 281 DAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
           +AI        D   P+       TEH  +   +VF K + V   
Sbjct: 322 EAIELLKKSGEDFVYPVEWGCDLQTEHERYLSEKVFKKAVFVTDY 366



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 75/226 (33%), Gaps = 39/226 (17%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC-----------SFAADA 416
               + P    + + +   +         D   F+ G  LK C                A
Sbjct: 253 EFWHIEPEVAFMELDDVIELAE-------DMLKFVIGKLLKTCPDEIAFFDAHFEKGLKA 305

Query: 417 RNH--IAQELG---------IINCNCFEFCWIMDF--PFYEWNE---EEKKIDFAHNPFT 460
           R    I+ + G         ++  +  +F + +++       +E    EK    A     
Sbjct: 306 RLEELISHDFGRVTYTEAIELLKKSGEDFVYPVEWGCDLQTEHERYLSEKVFKKAVFVTD 365

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
            P+         +         DL+  G  EI  G  R +  E +L A     ++     
Sbjct: 366 YPKEIKSFYMKQNPDGKTVAAVDLLVPGVGEIIGGSEREYDLEKLLAAMKERNMNL---- 421

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           + +       + G  PHGG   G +R++M   G  N+R+V LFP +
Sbjct: 422 DLYNDYIDLRKFGSVPHGGFGLGFERLIMYTTGMANIRDVILFPRT 467


>gi|145633224|ref|ZP_01788955.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144986070|gb|EDJ92660.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 383

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 67/355 (18%), Positives = 120/355 (33%), Gaps = 51/355 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 17  IGESVTVRGWVRTRRDSKAGLSFLAVYDGSCFDPIQAIINNDIENYESEILRLTTGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   AE          +EL A+K+E+    E+        + +      +   L 
Sbjct: 77  VTGKVVESPAEGQA-------VELQAEKVEVTGFVEDPDTYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RGENGKVDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F    D     E++L+ VF                           N V+++F
Sbjct: 250 MVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDKDVITRLENFVNSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
            +I Y DAI            P+   +   +EH        F   + V    +  
Sbjct: 310 AQIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKSPVVVKNYPKDI 364


>gi|317475550|ref|ZP_07934812.1| lysyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316908254|gb|EFV29946.1| lysyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 579

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/272 (21%), Positives = 112/272 (41%), Gaps = 10/272 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV    D  C +  K + +     +  L    
Sbjct: 60  VSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPDEDKEMYNTVFKRLLDLGDFI 119

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFLDLR 134
             E        G+I + AQK+ +L+ + +    V  +            +R++ R++DL 
Sbjct: 120 GIEGFVFRTQMGEISIHAQKLTVLAKSIKPLPIVKYKDGVAYDSFDDPELRYRQRYVDLI 179

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +  + +   KR  II +MR  +    + E  TPIL +      AR F           Y
Sbjct: 180 VNDGVKETFQKRATIIRTMRAALDEAGYTEVETPILQSIPGGASARPFTTHHNSLDMDLY 239

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ + + + + ++  
Sbjct: 240 -LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-EFTCVELYVQYKDYNWMMGF 297

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            E +L  +    + G   + +   I +    R
Sbjct: 298 TEKLLERICIAVNGGTETTIDGKTISFKAPYR 329



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 53/145 (36%), Gaps = 9/145 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+A+     +      + F
Sbjct: 383 EGTFIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERF 442

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  E  ++          +A Q GMPP  GI  GIDR+ ML+ G   ++EV  FP 
Sbjct: 443 KEQLKLSEKGDDEAMFIDQDFLKALQYGMPPTSGIGIGIDRLTMLMTGQPFIQEVLFFPQ 502

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGL 589
            +        +P+        ELG+
Sbjct: 503 MRPEKVTPKDAPAK-----FMELGI 522


>gi|218128656|ref|ZP_03457460.1| hypothetical protein BACEGG_00227 [Bacteroides eggerthii DSM 20697]
 gi|217989111|gb|EEC55426.1| hypothetical protein BACEGG_00227 [Bacteroides eggerthii DSM 20697]
          Length = 574

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/272 (21%), Positives = 112/272 (41%), Gaps = 10/272 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV    D  C +  K + +     +  L    
Sbjct: 55  VSVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPDEDKEMYNTVFKRLLDLGDFI 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFLDLR 134
             E        G+I + AQK+ +L+ + +    V  +            +R++ R++DL 
Sbjct: 115 GIEGFVFRTQMGEISIHAQKLTVLAKSIKPLPIVKYKDGVAYDSFDDPELRYRQRYVDLI 174

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +  + +   KR  II +MR  +    + E  TPIL +      AR F           Y
Sbjct: 175 VNDGVKETFQKRATIIRTMRAALDEAGYTEVETPILQSIPGGASARPFTTHHNSLDMDLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ + + + + ++  
Sbjct: 235 -LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-EFTCVELYVQYKDYNWMMGF 292

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            E +L  +    + G   + +   I +    R
Sbjct: 293 TEKLLERICIAVNGGTETTIDGKTISFKAPYR 324



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 53/145 (36%), Gaps = 9/145 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+A+     +      + F
Sbjct: 378 EGTFIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERF 437

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  E  ++          +A Q GMPP  GI  GIDR+ ML+ G   ++EV  FP 
Sbjct: 438 KEQLKLSEKGDDEAMFIDQDFLKALQYGMPPTSGIGIGIDRLTMLMTGQPFIQEVLFFPQ 497

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGL 589
            +        +P+        ELG+
Sbjct: 498 MRPEKVTPKDAPAK-----FMELGI 517


>gi|120555184|ref|YP_959535.1| lysyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|120325033|gb|ABM19348.1| lysyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 511

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 66/328 (20%), Positives = 134/328 (40%), Gaps = 27/328 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   S  +L    +G  V ++G +   R    ++    +D  G  Q+ A+ D    +  
Sbjct: 50  KYGDKSKEEL--ESLGIKVAIAGRMMLDRKAFKVV----QDMTGRIQIYASKDVQ--KDT 101

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K      ++ + G +              G + ++  +  +L+ +   PLP   +     
Sbjct: 102 KHWDMGDIVGVRGTLSKSGK---------GDLYVTMDEYVLLTKSLR-PLPEKHKGLTDT 151

Query: 123 SIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R+++R++DL  +    +    R++IIN+MR      +F+E  TP+L        AR F
Sbjct: 152 EARYRHRYVDLMVNEDSRRVFHARSKIINAMRQYFAERDFMEVETPMLQVIPGGATARPF 211

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ + + L+  GF+R F+I   FR+E   +   P EF  ++  
Sbjct: 212 VTHHNALGIDMY-LRIAPELFLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMVEFY 269

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ + +D+++  E++LR + ++     TV N  +     +    Y     D   P    
Sbjct: 270 QAYADYNDLMDLTEDMLRTITQKVLGTTTVINTRVLKDGSEETIEY-----DFGKPFERL 324

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWA 328
            V +  +     +  + L+ +      A
Sbjct: 325 TVVDAILRYNPDITREQLADDAQAREVA 352



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 10/169 (5%)

Query: 405 DPLKFCSFAAD---ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
           +P       AD   AR  +A+ LGI   + +    +     +E    E ++         
Sbjct: 334 NPDITREQLADDAQAR-EVAKNLGIHVKDIWGLGKV-QIEIFE-ATAEHRLTQPTFITEY 390

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P+      +  D       +++    G EIA+G    + +E   + F      K+  ++ 
Sbjct: 391 PKEVSPLARCKDSDPFVTERFEFFVGGREIANGFSELNDAEDQAERFQAQVAEKDAGDDE 450

Query: 522 FGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                     A + G+PP  G   GIDR+ MLL  + ++R+V LFP  +
Sbjct: 451 AMFYDDDYVMALEYGLPPTAGEGIGIDRLAMLLTNSPSIRDVILFPAMR 499


>gi|197302035|ref|ZP_03167096.1| hypothetical protein RUMLAC_00763 [Ruminococcus lactaris ATCC
           29176]
 gi|197298844|gb|EDY33383.1| hypothetical protein RUMLAC_00763 [Ruminococcus lactaris ATCC
           29176]
          Length = 463

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 123/375 (32%), Gaps = 54/375 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   V + GW+  +R      F+ + D       QVV +     F     +     
Sbjct: 13  REEYLDKQVTVGGWIRSIRDSKTFGFIVLNDGSYFETLQVVYHDKMENFAEISKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A ++ +   +     P+  +R   E +R     
Sbjct: 73  VVVKGTLVATPQ-------AKQPFEIQADEVVVEGASAPDY-PLQKKRHSFEYLR-TISH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++        F+   TP++T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSLAAYAIHKFFQERGFVYVHTPLITGSDCEGAGEMFRVTTMDMEN 183

Query: 190 -------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+    +     Q      A  F   +   P FR E+  + R   E
Sbjct: 184 LPKNEDGTVDYTQDFFGKETSLTVSGQLNGETYAQAFRSIYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSN 272
           F+ ++ E++F + +D +   E +L+ V                            N V++
Sbjct: 244 FWMIEPEIAFADLEDDMELAEAMLKYVINYVLENAPEEMNFFNSFVDKGLLDRLHNVVNS 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVN---PGYEVW 327
           +F R+ Y +AI     +       +       TEH  +    ++ K + V       + +
Sbjct: 304 DFARVTYTEAIEILEKNNDKFDYKVSWGCDLQTEHERYLTEEIYKKPVFVTDYPKEIKAF 363

Query: 328 AIPAKGGGGNRAFCD 342
            +   G G   A  D
Sbjct: 364 YMKLNGDGKTVAAVD 378



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 53/150 (35%), Gaps = 24/150 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +  ++ D+P     +E K        F M   G             A  
Sbjct: 338 HERYLTEEIYKKPVFVTDYP-----KEIK-------AFYMKLNGD--------GKTVAAV 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    E +L     +G+     E  +G      + G   H G   
Sbjct: 378 DCLVPGIGEIIGGSQREDDYEKLLARMQELGLK----EEDYGFYLDLRKYGSTRHAGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R VM L G  N+R+V  FP + N C+L
Sbjct: 434 GFERCVMYLTGMSNIRDVIPFPRTVNNCEL 463


>gi|184154700|ref|YP_001843040.1| lysyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|260663748|ref|ZP_05864636.1| lysyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|238692942|sp|B2GA78|SYK_LACF3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|183226044|dbj|BAG26560.1| lysyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|260551799|gb|EEX24915.1| lysyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|299782822|gb|ADJ40820.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Lactobacillus
           fermentum CECT 5716]
          Length = 497

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 61/312 (19%), Positives = 120/312 (38%), Gaps = 19/312 (6%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G+L ++     V ++G +   R  G   F D+ D  G  Q     D    E  K  +   
Sbjct: 52  GELLLAQHN-VVTIAGRMIGKRGSGKASFADLLDRGGKIQFYVRQDMVGEEAYKLFKESD 110

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           +    G     + + I   +  G++ + A+KI  LS A   PLP          + ++ R
Sbjct: 111 L----GDFWGITGDVIKTRM--GELTVRAEKITFLSKALR-PLPDKYHGLQDPELVYRQR 163

Query: 130 FLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187
           +LDL  +         RT+II ++R  M    F+E  TPIL   +S   AR F+      
Sbjct: 164 YLDLITNRESFERFQTRTKIIKAVRRYMDDNGFLEVETPILENIASGAEARPFVTHHNAL 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y +  A +   + L+  G +R +++   FR+E       P EF  ++   ++ + +
Sbjct: 224 NIDMY-MRIATELRLKRLIVGGMERVYELGRIFRNEGMDPYHNP-EFDTMETYAAYFDFN 281

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP-------DLRNPIIMH 300
           D++   E + +      ++   ++     + +  + +R             D    + + 
Sbjct: 282 DVMKETEGIFKAAAGVVADDLKITYQGTELDFSTSFKRLHMVDAIKEATGIDFWQEMTVE 341

Query: 301 NVTEHFVHSEFR 312
              +    +  +
Sbjct: 342 EARKLADDNGIK 353



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 12/156 (7%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEW---NEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +A + GI   + ++   I++  F+E    +  E+ I    +P  +          N+ 
Sbjct: 344 RKLADDNGIKYESWWKVGHIINA-FFEEKVQDTLEQPIFIYGHPVEVSPLAKI----NEE 398

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
            S    +++L   G E A+     +      + F           +           A +
Sbjct: 399 DSRFTDRFELYILGKEYANAFSELNDPIDQRKRFEAQAQENAEGNDEAQPIDEDFVEALE 458

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GMPP GG+  GIDR+VML+  AK++R+V LFP  +
Sbjct: 459 YGMPPTGGLGVGIDRMVMLMTDAKSIRDVLLFPTMR 494


>gi|291523160|emb|CBK81453.1| asparaginyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 464

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 63/355 (17%), Positives = 116/355 (32%), Gaps = 47/355 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             + +G  V + GWV  +R      FL + D          P    F  A +  S+    
Sbjct: 14  RDNYLGQTVEIGGWVRNIRDSKTFGFLVVNDGT-----YFEPLQVVFHDAMANFSDICHL 68

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +    + +         E+ A+ +EI   A     P+  +R   E +R     L 
Sbjct: 69  NVGAAVIVKGQLVATPKAKQPFEIQAETVEIEG-ASTPDYPLQPKRHTFEYLRTL-THLR 126

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R +T       R+ I  ++       +F+   TP++T S  EGA +    + ++     
Sbjct: 127 ARTNTFEAVFRVRSLIAYAIHQFFQERDFVYVHTPLITGSDCEGAGEMFQVTTMDLNNVP 186

Query: 190 -----------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+  P       Q      A  F   +   P FR E+  + R   EF+
Sbjct: 187 KNEEGKVDFSEDFFGKPTNLTVSGQLNGETFAMAFRNIYTFGPTFRAENSNTTRHAAEFW 246

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-------------------- 275
            ++ E++F +  D +   E++++ V             F                     
Sbjct: 247 MIEPEIAFADLQDDMELAESMMKYVIGYVLEHAPEEMKFFNQFVDKGLLERLEHVRTSDF 306

Query: 276 -RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVW 327
            R+ Y +AI        +    +       TEH  +   ++F + + V    +  
Sbjct: 307 GRVTYTEAIELLEKHNDEFDYKVSWGCDLQTEHERYLTEKIFKRPVFVTDYPKDI 361



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 51/140 (36%), Gaps = 26/140 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              ++ D+P        K I      F M Q         +         D++  G  EI
Sbjct: 350 RPVFVTDYP--------KDIKA----FYMKQ---------NPDGKTVAAMDMLVPGIGEI 388

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R +  + +L     +G+     E  +       + G   H G   G +R VM L 
Sbjct: 389 IGGSERENDYDKLLTRMKELGLK----EEDYSFYLDLRKYGSTRHAGFGLGFERCVMYLT 444

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G  N+R+V  FP + N C+L
Sbjct: 445 GMGNIRDVIPFPRTVNNCEL 464


>gi|257076916|ref|ZP_05571277.1| asparaginyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 429

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 11/257 (4%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L    +G  V + GWV+R+R  G I F+ +RD  GI Q +A+ ++   E  K +     L
Sbjct: 8   LSDDLLGKIVSIRGWVYRIRSSGKITFIVMRDSTGIIQCIASSENLNDEQMKEI---SSL 64

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I+  +            +TG  E+S Q  +I    E  P+     ++  E      R L
Sbjct: 65  TIESSIELSGKLRKEPRAVTG-YEISLQSYKIYERNENFPIA----KDLGEEFLLDNRHL 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR       +  R+ +  +       E++ +   P+  +++ EG            G  
Sbjct: 120 WLRSREFTAVLKIRSTVFKAFADYFYKEDYYQVQAPMFVSTATEGGSSLFNVDYF--GEK 177

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y + L+ S  ++ F IAP FR E  R+ R   E++  + E ++   +D++ 
Sbjct: 178 VNLTQSSQFYLETLIYS-LEKVFTIAPSFRAEKSRTRRHLTEYWHAEGEAAWYSNEDMMA 236

Query: 252 TMENVLRGVFEEFSNGN 268
             E +++ + +E    N
Sbjct: 237 DEEKMIKYIIDEVLKNN 253



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 79/216 (36%), Gaps = 31/216 (14%)

Query: 359 IFWRLDE--SGNVAGMGPVAKHLNIV-NTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           I + +DE    N+  +  + + +N + N +    R+  +D        G  LK+      
Sbjct: 242 IKYIIDEVLKNNLEDLEIIKRDINKIKNIKIPFERIKYKDLIEKSKEFGMNLKYGDDLGA 301

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
                 +E GI+  +     ++ D+P       E    F H P          +  +DLL
Sbjct: 302 -----DEEYGIM-VHFDNPIFVTDYP-------ESLKTFYHRP---DPDNPGEILCHDLL 345

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + + +         E+  GG R +  + +L       ++       +       + G  P
Sbjct: 346 APEGYG--------EVLGGGERIYDLQQLLDRIKENNLNP----EDYYWYVDLRKYGSIP 393

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           H G   G+DR+VM + G  NVRE   +P +      
Sbjct: 394 HSGFGLGLDRLVMWICGLSNVRETIPYPRTIRRVKP 429


>gi|228991204|ref|ZP_04151162.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus pseudomycoides DSM
           12442]
 gi|228768428|gb|EEM17033.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus pseudomycoides DSM
           12442]
          Length = 432

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 67/262 (25%), Positives = 122/262 (46%), Gaps = 15/262 (5%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V L GWV ++R  G I FL +RD  G+ Q V   + A +     V  E V+ I G ++
Sbjct: 19  KVVLLQGWVKKIRHLGNISFLLLRDRTGVIQCVLEKELAGY----KVDVESVVQIIGELV 74

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPESIRFKYRFLDLRRDT 137
             +   +        +EL  +++++L+ AE LP  V   +           R + +R + 
Sbjct: 75  ETTKTEL-------GVELLVEEVKVLNTAEPLPFEVNKRKLQVGLDQMLNERVISIRHER 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           +      ++ ++ +    +I  +F    TP + +   EG  +        + ++ A  Q+
Sbjct: 128 IQAIFTIQSTLVQAFSEFLIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAYLA--QS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENV 256
           PQ YKQ+++A GF+  F+IAP +R E   S R   E+  LD+EM F+ +  +++    +V
Sbjct: 186 PQFYKQMMVAGGFELVFEIAPVYRAEHHNSSRHLNEYISLDVEMGFIEDFYEVMALEADV 245

Query: 257 LRGVFEEFSNGNTVSNNFLRIC 278
           LR +FE+           L++ 
Sbjct: 246 LRYMFEQVGQKCEKELVLLQVT 267



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 62/155 (40%), Gaps = 26/155 (16%)

Query: 413 AADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           A D      + +G      +  +F +I  +P             A   +TMP    +++ 
Sbjct: 296 AGDLDTEGEKLVGKYVKETYGSDFVFITHYP-----------KEARPMYTMPNKENQAVT 344

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            +         +DL+  G EI SG  R H   ++L +F   G+        F      F+
Sbjct: 345 DS---------FDLLYKGLEITSGAQRIHEYRMLLASFKEKGLQP----ENFESYINTFR 391

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G PPHGG   G++R+V   L   NVRE S FP  
Sbjct: 392 YGCPPHGGFGIGLERLVYKFLELSNVREASAFPRD 426


>gi|187779156|ref|ZP_02995629.1| hypothetical protein CLOSPO_02751 [Clostridium sporogenes ATCC
           15579]
 gi|187772781|gb|EDU36583.1| hypothetical protein CLOSPO_02751 [Clostridium sporogenes ATCC
           15579]
          Length = 506

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 69/312 (22%), Positives = 127/312 (40%), Gaps = 34/312 (10%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCIDG 75
               L+G V  +R  G   F +I D  G  Q+  +        +EI K +    ++ ++G
Sbjct: 64  QEFTLAGRVMLIRRMGNATFANIIDEKGNIQIFLSKKLIGAKSYEILKLIDVGDIIGVNG 123

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V             TG+I +   + E+LS +    LP          +R ++R LD+  
Sbjct: 124 AV---------FKTQTGEITIRVNQFELLSKSIR-TLPEKYHGIQDADLRQRHRSLDMIM 173

Query: 136 DT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193
           +  + +  +KR++ I ++R  +   NFIE  TPIL T      A+ F         + Y 
Sbjct: 174 NEGVKERFIKRSKAITAIREYLNNLNFIEADTPILDTKYGGGEAKPFTTFVNALDCNVY- 232

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  +P+ Y + L+  G +R +  A  FR+E       P EF   +  MS+ + +D++  M
Sbjct: 233 MNVSPELYLKRLIVGGIERVYTFARAFRNEGIDRTHYP-EFSLFECYMSYADYNDMMKLM 291

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEHFVHSE 310
           EN+   VF + +                   +YG  + D + P     M ++ +     +
Sbjct: 292 ENIYEYVFNKVNGTTK--------------VQYGDVEIDFKAPWKRAKMCDLVKKDTGID 337

Query: 311 FRVFSKILSVNP 322
              F++   +  
Sbjct: 338 VETFTREEIIKG 349



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 47/143 (32%), Gaps = 31/143 (21%)

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                +  +++DFP     EE   +   H                   S    +++    
Sbjct: 384 EKKLIQPTFVIDFP-----EESSPLCKIHR----------------HNSDLIERFEPYAY 422

Query: 488 GFEIASGGIRNHMS-------EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           G E+ +     +                     +   ++  F     A    MPP GG+ 
Sbjct: 423 GVELGNAYSELNDPLKQRILLHEQASKLRAGLETASPMDEEFAV---AIDTAMPPTGGLG 479

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            GIDR++M L G+  +++V  FP
Sbjct: 480 MGIDRMIMFLTGSYAIKDVIAFP 502


>gi|154484484|ref|ZP_02026932.1| hypothetical protein EUBVEN_02198 [Eubacterium ventriosum ATCC
           27560]
 gi|149734332|gb|EDM50249.1| hypothetical protein EUBVEN_02198 [Eubacterium ventriosum ATCC
           27560]
          Length = 463

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/440 (14%), Positives = 137/440 (31%), Gaps = 68/440 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVLCID 74
           +   + + GWV  +R      F+ + D      +    +     F           L + 
Sbjct: 17  IDKEIEVGGWVRSIRDSKTFGFIVLNDGTCFKPLQVVYSDKLDNFGEVSKTNIGAALIVK 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G +++               E+ A ++ +   +     P+  +R   E +R     L  R
Sbjct: 77  GKLVATPN-------AKQPFEIQADEVYVEGES-TPDYPLQKKRHSFEYLR-TISHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +T       R+    ++      + F+   TP++T S  EGA +    + ++       
Sbjct: 128 TNTFQAVFRVRSLCAYAIHKFFQEQGFVYVHTPLITGSDCEGAGEMFQVTTMDLNNVPKT 187

Query: 190 ---------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+  P       Q      A  F + +   P FR E+  + R   EF+ +
Sbjct: 188 EEGKVDYTEDFFGKPTNLTVSGQLNGETYAMAFKKIYTFGPTFRAENSNTTRHAAEFWMI 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F +  D +   E +++ V +          NF                      R
Sbjct: 248 EPEIAFADLADDMELAEAMIKYVIKYVLENAPEEMNFFNSFVDKGLLDRLNHVINSEFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           + Y +AI+            +       TEH  +   ++F + + V    +         
Sbjct: 308 VTYTEAIKLLEEHNDKFEYKVSWGVDLQTEHERYLTEQIFKRPVFVTDYPKEI------- 360

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
              +AF  ++N+         +A +   +   G + G     ++            L + 
Sbjct: 361 ---KAFYMKLNK-----DGKTVAAMDCLVPGIGEIIGGSQREENY--EVLTKRMEELGLN 410

Query: 395 DGDSCFFIAGDPLKFCSFAA 414
           + D  F++          A 
Sbjct: 411 EKDYQFYLDLRKYGTARHAG 430



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K        F M           D  ++ A    LV    EI 
Sbjct: 349 RPVFVTDYP-----KEIK-------AFYMK-------LNKDGKTVAAMDC-LVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    EV+ +    +G++++  +          + G   H G   G +R++M L G
Sbjct: 389 GGSQREENYEVLTKRMEELGLNEKDYQ----FYLDLRKYGTARHAGFGLGFERMIMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N C+L
Sbjct: 445 MGNIRDVIPFPRTVNNCEL 463


>gi|313677686|ref|YP_004055682.1| asparaginyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312944384|gb|ADR23574.1| asparaginyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 507

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 62/290 (21%), Positives = 110/290 (37%), Gaps = 27/290 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           R      L          + GWV   R    + F+ + D   I   Q+VA+P+       
Sbjct: 30  RVKIKKLLASEATEQQTNVKGWVRTKRGGKPVFFIALNDGSTINNIQIVADPELISENTI 89

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K + +   + + G V++      +       +E+ A++IEIL  A+    P+  ++   E
Sbjct: 90  KDITTGAAISVIGKVVASQGAGQS-------VEIVAEQIEILGKADPEKYPLQPKKHSME 142

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R K   L +R  T       R  +  ++      + F    TPI+TA+  EGA +   
Sbjct: 143 FMREK-AHLRMRSSTFSAVFRIRHSLAFAIHQFFHEKGFYNLHTPIITANDAEGAGETFH 201

Query: 183 PSRVNQGSFYALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDP 225
            +  +        +    YKQ                  L A      +   P FR E+ 
Sbjct: 202 VTNFDLDKIPMTDEGKVDYKQDFFGKETNLTVSGQLEGELSAMALGEIYTFGPTFRAENS 261

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + R   EF+ ++ EM+F + +D +N  E +L+ V +          +FL
Sbjct: 262 NTTRHLAEFWMVEPEMAFYDLNDNMNLAEEMLKYVVKYALENCKEDLDFL 311



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 21/127 (16%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHM 500
            +++ ++ K        F M Q   +   G           D++  G  EI  G  R   
Sbjct: 397 LFDYPKDIK-------AFYMRQNDDDKTVG---------AMDILFPGIGEIVGGSQREER 440

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            + + Q    + I     E+         + G  PH G   G +R+++ + G  N+R+V 
Sbjct: 441 LDKLTQRMKEMDIP----EDELWWYLDTRKFGTAPHSGFGLGFERLMLFVTGMGNIRDVI 496

Query: 561 LFPMSQN 567
            FP + +
Sbjct: 497 PFPRTPD 503


>gi|311256989|ref|XP_003126904.1| PREDICTED: lysyl-tRNA synthetase-like [Sus scrofa]
          Length = 583

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/276 (21%), Positives = 116/276 (42%), Gaps = 15/276 (5%)

Query: 6   THSCGDLGVSDVGS-----FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           TH   +      G       ++++G +H  R  G  +IF D+R      QV+AN  S  +
Sbjct: 106 THFIEEYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNY 163

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  +           G ++             G++ +   +I +LS      LP      
Sbjct: 164 KSEEEFVRINNKLRRGDIIGVQGSP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGL 220

Query: 120 YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
             +  R++ R+LDL  +   +   + R++II  +R  + A  F+E  TP++        A
Sbjct: 221 KDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDALGFLEIETPMMNIIPGGAVA 280

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   
Sbjct: 281 KPFITYHNELDMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTC 338

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +  M++ +  D++   E ++ G+ +  +    V+ +
Sbjct: 339 EFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYH 374



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 465 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDETFCTALE 524

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG   GIDR+ M L  + N++EV LFP  +
Sbjct: 525 YGLPPTGGWGMGIDRVTMFLTDSNNIKEVLLFPAMK 560


>gi|261253209|ref|ZP_05945782.1| asparaginyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260936600|gb|EEX92589.1| asparaginyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 466

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 124/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +        V    +    G
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNNLNNYEDEV----LKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPAKGQDFELAATDVKVVGWVEDAETYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + F   S P++TAS  EGA +    S ++  +     
Sbjct: 132 NVIGAVARVRNCLSQAIHRFYHEQGFFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 191

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +    Y +                    A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 KGEVDYNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            E++F + DD+    E++L+ VF+           F                      ++
Sbjct: 252 PEVAFADLDDVAKLSEDMLKFVFKAVLEECRDDLEFFAQRIDKEAITRLEQFVSSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI+       +   P+   +   +EH        F   + V    +          
Sbjct: 312 DYTDAIQILVDSGREFEFPVEWGIDMSSEHERFLAEEHFKAPVIVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             RA  D     A     PG+  I 
Sbjct: 367 YMRANDDGKTVAAMDVLAPGIGEII 391



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 6/102 (5%)

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           ++ ND     A   D++  G  EI  G  R    +++ +    VGI              
Sbjct: 368 MRANDDGKTVA-AMDVLAPGIGEIIGGSQREERLDILDERMREVGIDP----EHMNWYRD 422

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 423 LRKYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|261367260|ref|ZP_05980143.1| asparagine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282570862|gb|EFB76397.1| asparagine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 461

 Score =  179 bits (454), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 71/384 (18%), Positives = 122/384 (31%), Gaps = 59/384 (15%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV----ANPDSACFEIAKSVRSEWVLCI 73
           G+ V + GW   VR    I F+ + D      V     A+  +   EIAK          
Sbjct: 17  GTKVTVCGWAKTVRDSKNIGFISLSDGSCYKPVQIVFQADKLANYAEIAKCGLYTSFEVT 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
             LV++ +A+           E++A  I +L            +++           L  
Sbjct: 77  GTLVLTPNAKQP--------FEINADAITVLGPCGPEYPLQ--KKKMGMDYLRTMTHLRP 126

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS--- 190
           R +T +     R +   ++        F    TPI T S  EGA +    + ++      
Sbjct: 127 RTNTFNAAFRVRGQAAFAIHQFFHERGFTYVHTPIFTGSDCEGAGEMFQVTTMDLNDIPR 186

Query: 191 -----------FYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+  P       Q +   MA      +   P FR E     R   EF+ 
Sbjct: 187 TEDGAVDYTKDFFKRPVNLTVSGQLEAEAMAMALGNVYTFGPTFRAEKSYDTRHAAEFWM 246

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NNFL 275
           ++ EM+F + +  ++T E + + V     +                          ++F 
Sbjct: 247 IEPEMAFADLNTYMDTAEAMTKYVIRYLLDNCPDELAFFNQFFDKGLIERLELVANSDFA 306

Query: 276 RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           R+ Y DAI     +  + +  +   M   TEH  +   ++F K     P +         
Sbjct: 307 RVSYTDAIELLKQNDANFQYKVSWGMDLQTEHERYLTEQIFKK-----PVFVTDYPKEIK 361

Query: 334 GGGNRAFCDRMNEWARSQGQPGLA 357
               R   D     A     PG+ 
Sbjct: 362 AFYMRQNEDGKTVAAADMLVPGIG 385



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 48/136 (35%), Gaps = 24/136 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P     +E K        F M Q               A    LV    E+ 
Sbjct: 349 KPVFVTDYP-----KEIK-------AFYMRQNED--------GKTVAAADMLVPGIGELI 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+L     +G+ +      +       + G   H G   G +R++M + G
Sbjct: 389 GGSQREERLDVLLARLDELGLRR----EDYDWYLDLRRFGSVKHAGYGLGFERLLMYVTG 444

Query: 553 AKNVREVSLFPMSQNF 568
             N+R+V  FP +   
Sbjct: 445 IPNIRDVIPFPRTCGG 460


>gi|294140784|ref|YP_003556762.1| asparaginyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293327253|dbj|BAJ01984.1| asparaginyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 466

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 70/389 (17%), Positives = 121/389 (31%), Gaps = 58/389 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVL 71
           VGS + + GWV   R    GI FL + D      +      + ++   EI K      V+
Sbjct: 16  VGSQITVRGWVRSRRDSKAGISFLAVYDGSCFDPIQGVVPNSLENYNNEILKLTAGCSVI 75

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G V+    +           EL    IE+    E+        + +      +   L
Sbjct: 76  M-TGEVVESPGKGQA-------FELQVTSIEVAGWVEDPDTYPMAAKRHSIEHLRELAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--- 188
             R + +      R  +  ++      E FI  STP++TAS  EGA +    S ++    
Sbjct: 128 RPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFQVSTLDMENL 187

Query: 189 -----------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRTDEGKVDYSEDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ E++F + DD+    E +L+  F+           F                    
Sbjct: 248 WMVEPEVAFADLDDVAALAEQMLKFCFKAVLEERRDDLEFFAQRVDKTVIERLESFVTSD 307

Query: 276 --RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
             ++ Y +A+             +   +   +EH  +     F   + V    +      
Sbjct: 308 FAQVDYTEAVEILKNCGKKFEYAVEWGIDLQSEHERYLAEEHFKAPVVVKNYPKDI---- 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 364 -KAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 6/99 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+      + +SK      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGAQREERLDVLDARLEEMNLSK----EDYWWYRDMRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G  PH G   G +R+V  + G  N+R+V  FP +    
Sbjct: 426 YGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPRAPKSA 464


>gi|283833779|ref|ZP_06353520.1| asparagine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291070442|gb|EFE08551.1| asparagine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 466

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 126/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNQDV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A ++E+    E+        + +      +   +  R 
Sbjct: 72  CSVIVTGKVVASPGQGQSFEIQATEVEVTGWVEDPDTYPMAAKRHSIEYLREVAHMRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NMIGAVARVRHTLAQALHRFFHEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   DD+    E +L+  F+                            +  +F ++
Sbjct: 252 PEVAFANLDDVAGLAEAMLKYAFKAVLAERADDMKFFAERVDKDAISRLERFIDADFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+    ++ +EH  +     F   + V    +          
Sbjct: 312 DYTDAVSILEKCGKQFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMLEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|197097424|ref|NP_001127155.1| lysyl-tRNA synthetase [Pongo abelii]
 gi|55725250|emb|CAH89490.1| hypothetical protein [Pongo abelii]
          Length = 625

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/287 (20%), Positives = 115/287 (40%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 155 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFIHINNKLRRGDIIGV 212

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +   +I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 213 QGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 269

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 270 QKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 328

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ 
Sbjct: 329 ELYHKILVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMVS 387

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          ++ Y            D   P    N+ E 
Sbjct: 388 GMVKHITGSY-------KVTYHPDGPEGQAYDVDFTPPFRRINMVEE 427



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 507 KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 566

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 567 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMK 602


>gi|169824319|ref|YP_001691930.1| asparaginyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831124|dbj|BAG08040.1| asparaginyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 461

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 67/382 (17%), Positives = 129/382 (33%), Gaps = 56/382 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75
              V + GW+   R    + F+++ D      V      D+  FE A+ ++    + + G
Sbjct: 16  DKEVEVGGWIKNSRFSKNVGFIELNDGTFFNPVQIVVGKDNEDFERAEKLKLSSAIIVVG 75

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++       N+       E+ A K+ +   +     P+  +R   E +R     L  R 
Sbjct: 76  KLVLTP----NSKQP---FEIQASKVIVEGES-TDDYPLQKKRHTFEFLR-TILHLRPRT 126

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           +T +     R+R+  ++        F+   TPI+T S  EGA +    + ++        
Sbjct: 127 NTFNAVFRVRSRLAFAIHKFFNERGFVYVHTPIITGSDAEGAGEMFRVTTLDLDNLPKDD 186

Query: 190 --------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F++         Q +    A  F   +   P FR E   + R   EF+ ++
Sbjct: 187 DGNVDFTQDFFSKSTNLTVSGQLQAEAYALAFRNVYTFGPTFRSEHSNTPRHAAEFWMME 246

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRI 277
            E+ F + DD+ +  E+++R + ++                              +F ++
Sbjct: 247 PEICFADLDDVCSLAEDMVRYIIKDVMENCEEEIKFFNSFVDKNLIERLTKVANKSFKKL 306

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y +AI            P+   M   TEH  +   +V        P +           
Sbjct: 307 TYTEAIDILKKSGEKFEYPVKWGMDLQTEHEKYLSEKVVD-----GPVFVTDYPKEIKAF 361

Query: 336 GNRAFCDRMNEWARSQGQPGLA 357
             R   D+    A     PG+ 
Sbjct: 362 YMRLNDDKKTVAATDLLVPGIG 383



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 71/212 (33%), Gaps = 27/212 (12%)

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-- 415
           YI   + E+        +    + V+   I     + +         + +     + +  
Sbjct: 267 YIIKDVMENCEEE----IKFFNSFVDKNLIERLTKVANKSFKKLTYTEAIDILKKSGEKF 322

Query: 416 -ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
                   +L       +    ++D P +  +            F M          +D 
Sbjct: 323 EYPVKWGMDL-QTEHEKYLSEKVVDGPVFVTD-----YPKEIKAFYMR-------LNDDK 369

Query: 475 LSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
            ++ A   DL+  G  E+  G  R    E++ Q    +G +KE  +          + G 
Sbjct: 370 KTVAAT--DLLVPGIGELIGGSQREERFELLDQKMDELGFNKEEYK----WYLDLRKYGG 423

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             HGG   G +R+VM + G  N+R+V  FP +
Sbjct: 424 VKHGGFGLGFERMVMYMTGMSNIRDVIPFPRT 455


>gi|302348210|ref|YP_003815848.1| Asparaginyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328622|gb|ADL18817.1| Asparaginyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 432

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 68/321 (21%), Positives = 140/321 (43%), Gaps = 15/321 (4%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAKSVRSEW 69
           ++  S  GS V+L GWV+R R     IF+ +RD  GI Q V +  +    + A+ V  E 
Sbjct: 11  EVVASSEGSRVKLRGWVYRKRDLSSKIFIVVRDSEGIVQCVVDRSNEELSKAAEKVTIES 70

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + ++G+V S            G  E++ +++ I+ +A++   P+ G            R
Sbjct: 71  SVEVEGVVRSDQR-------APGGKEVNVERLNIVGLADDF--PIKGGESVD--YLLDIR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR   L + +  R  ++ ++R   I+  + E S PILT S+ EG           + 
Sbjct: 120 HLWLRSRRLTQIMRIRATVLEALRNYFISNGWWEVSPPILTQSAVEGGATLFPVDFFGRK 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y ++++ S  +R + + P FR E  R+ R   E++ L+ E ++++  D+
Sbjct: 180 AY--LSQSAQFYLEVMIFS-LERVWSLTPSFRAERSRTRRHLYEYWHLEGEAAWMDMHDM 236

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           +  +E +++   +   +       FLR   +       +   ++     +  + +     
Sbjct: 237 MKFVEGLVKSAVKAVLDKRQEELQFLRRNQEPLEETLKSSFEEVTYDEAIERLQKRGFKI 296

Query: 310 EFRVFSKILSVNPGYEVWAIP 330
           ++             +  ++P
Sbjct: 297 KWGDDIGADEEKALTQDLSVP 317



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 10/125 (8%)

Query: 446 NEEEKKIDFAHNPF--TMPQGGMES--LKGNDLLSIKAFQYDLVCN--GFEIASGGIRNH 499
           +EE+        PF  TM    ++S  +K  D        +DL       E+  G  R  
Sbjct: 305 DEEKALTQDLSVPFFLTMFPKHLKSFYMKTCDRRPEVVLGFDLEAPEGYGEVVGGSQRED 364

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             +V+LQ      ++ +  +          + G  PH G   G+DR+VM + G  ++R+ 
Sbjct: 365 RYDVLLQRIKESNLNPDDYQ----WYLDLRRYGSVPHSGFGLGVDRLVMWIAGLDHIRDS 420

Query: 560 SLFPM 564
             FP 
Sbjct: 421 IPFPR 425


>gi|299143963|ref|ZP_07037043.1| asparagine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518448|gb|EFI42187.1| asparagine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 484

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/371 (17%), Positives = 128/371 (34%), Gaps = 51/371 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
           +   V++ GW+   R      F+++ D       Q+V +     F   +       L ++
Sbjct: 38  IDRDVKIEGWIKTSRSSKNFGFIELTDGSCFGSLQIVYDDKLQNFSEVEKYPISSSLLVE 97

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++               IEL A KIE    ++    P+  +R   E +R     L  R
Sbjct: 98  GKIVESPG-------AKQPIELHAVKIEAYCESDRDY-PLQKKRHTMEYLR-TIAHLRGR 148

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------ 188
            +T +     R+ +  ++      + F+  +TP++TAS  EGA +    + ++       
Sbjct: 149 SNTFNAVFRVRSILAFAIHKFFQEKGFVYVNTPLITASDAEGAGEMFQVTTLDLKNIPLT 208

Query: 189 --------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q +    A  F   +   P FR E+  + R   EF+ +
Sbjct: 209 EDGKVDFSNDFFGKSTNLTVSGQLEAESFALAFGNVYTFGPTFRAENSNTARHAAEFWMI 268

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F + ++ +   E +L+ + +   +       F                      R
Sbjct: 269 EPELAFADLEENMRISEEMLKYIIKYVLDNAKDEMEFFNSFIDKGLFERLNNVVNSDFGR 328

Query: 277 ICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           I Y +AI        + + P+       TEH  +    V+ K L V    +         
Sbjct: 329 ITYTEAIEVLKKSGREFKYPVEWGVDLQTEHERYLTEEVYKKPLFVINYPKEIKAFYMKE 388

Query: 335 GGNRAFCDRMN 345
             ++     M+
Sbjct: 389 NEDKKTVAAMD 399



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 71/221 (32%), Gaps = 41/221 (18%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAA 414
           L YI   + ++          +  N    + +  RL+   + D       + ++    + 
Sbjct: 288 LKYIIKYVLDNAKDEM-----EFFNSFIDKGLFERLNNVVNSDFGRITYTEAIEVLKKSG 342

Query: 415 ---------DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
                            E  +      +  +++++P     +E K        F M +  
Sbjct: 343 REFKYPVEWGVDLQTEHERYLTEEVYKKPLFVINYP-----KEIK-------AFYMKENE 390

Query: 466 MESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                            DL+  G  EI  G  R    EV+ +   N+G+  +  +     
Sbjct: 391 D---------KKTVAAMDLLVPGVGEIIGGSQREDRLEVLEEKMKNIGMDMDTYK----W 437

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
                + G   H G   G +R VM + G  N+R+V  FP +
Sbjct: 438 YLDLRRYGSAQHSGFGLGFERAVMYVTGMSNIRDVIPFPRT 478


>gi|326496086|dbj|BAJ90664.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 535

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 66/354 (18%), Positives = 125/354 (35%), Gaps = 58/354 (16%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSE 68
           D G S VG  + + GWV   R    + F+++ D   ++ +     P++  ++   S+ + 
Sbjct: 73  DQGTSWVGKELTVRGWVRTCRAQRTVTFVEVNDGSCLSNMQCVLTPETEGYDQIDSITTG 132

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + ++G+V S             +++L   KI ++  ++    P+  +R   E +R   
Sbjct: 133 ASVLVEGVVASSQGG-------KQKVDLKVSKIIVIGESDPTSFPIQKKRASREFLR-TV 184

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +T       R  +  +         FI  S+PI+TAS  EGA +    + +  
Sbjct: 185 AHLRPRTNTFGAVARVRNALAYATHNFFQDNGFIWVSSPIITASDCEGAGEQFYVTTLLS 244

Query: 189 G----------------------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDE 223
                                   F+  P       Q      AS     +   P FR E
Sbjct: 245 NSAEGGCLVNSIPSKDGRVDWSQDFFCKPAFLTVSGQLNGETYASALSDIYTFGPTFRAE 304

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN----------------- 266
           +  + R   EF+ ++ E++F + +D +      L+ V +                     
Sbjct: 305 NSNTSRHLAEFWMIEPELAFADLNDDMACASAYLQYVVKYILENCKEDMDFFDTWVEKGI 364

Query: 267 ----GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVF 314
                N    NF+++ Y DAI+           P+   +   +EH  +     F
Sbjct: 365 IDRLNNVAEKNFVQMSYSDAIKLLIGSNKKFEFPVKWGLDLQSEHERYITEVAF 418



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 54/152 (35%), Gaps = 12/152 (7%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKID---FAHNPFTMPQGGME----SLKGNDLLSIK 478
           +I  N  +F + + +     +E E+ I    F  +P  +     E     ++ ND     
Sbjct: 388 LIGSNK-KFEFPVKWGLDLQSEHERYITEVAFGGHPVIIRDYPKEIKAFYMRQNDDGKTV 446

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A    LV    E+  G  R    + +        ++K    + +       + G  PH G
Sbjct: 447 AAMDLLVPRVGELIGGSQREERLDYLEARLDESNLNK----DSYWWYLDLRRYGSVPHAG 502

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              G +R+V    G  N+R+   FP      +
Sbjct: 503 FGLGFERLVQFATGIDNIRDAIPFPRVPGSAE 534


>gi|301107430|ref|XP_002902797.1| lysyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262097915|gb|EEY55967.1| lysyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 651

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/376 (17%), Positives = 135/376 (35%), Gaps = 16/376 (4%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V ++G +H  R  G  ++F D+R D     ++    D   +E  ++      +   G ++
Sbjct: 116 VSVAGRLHSKRASGSKLVFYDLRADG---KKLQIMSDVGTYESPEAFAQIHSILRRGDIV 172

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                        G++ +  Q++ +LS    +           +  R++ R+LDL  +  
Sbjct: 173 GVKG--HPGKSKKGELSIFPQQLVLLSPCMHMLPKSHAGLTLQQDTRYRQRYLDLIMNDD 230

Query: 139 HKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            + +   R +IIN +R  +  +NF+E  TP++            V    +      +  A
Sbjct: 231 SRGVFQTRAKIINFIRRFLDEKNFLEVETPMMNMIVGGATAKPFVTYHNDLHMNLFMRVA 290

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  G DR ++I   FR+E       P EF   +  M++ + +D++   E + 
Sbjct: 291 PELYLKQLVIGGLDRVYEIGRQFRNEGIDLTHNP-EFTSCEFYMAYADYNDLMTMTEKLF 349

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
             + +E +         + I  +        D       + M +  E     +  +    
Sbjct: 350 SEMVKEITG-----GYTITIQKEPGEEAVTIDFTPPFKRVSMVSAVEEATGVKVPIDEPE 404

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAK 377
             V    E+           R+    +++      +   AY               P+AK
Sbjct: 405 KCVAILEELVTKYELECAPPRSIARLLDKLVGHFIEDNKAYWTKPFFIMDQPVYNSPLAK 464

Query: 378 HLNIVNTEAIRVRLDM 393
           +       A+  R ++
Sbjct: 465 Y--HREKPALTERFEL 478



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 9/137 (6%)

Query: 448 EEKKIDFAHNPFTMPQG--GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML 505
           E+ K  +    F M Q        K +        +++L   G EI +     +  +V  
Sbjct: 440 EDNKAYWTKPFFIMDQPVYNSPLAKYHREKPALTERFELFLAGAEICNAYTELNNPKVQR 499

Query: 506 QAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           + F           +  +        A + G+PP  G   G+DR+ M L    N++EV L
Sbjct: 500 ERFIEQMEQAAAGDDEAQPHDESFCTAMEYGLPPTAGWGCGVDRLTMFLSNRFNIKEVLL 559

Query: 562 FPMSQNFCDLLMGSPST 578
           FP  +        +P+ 
Sbjct: 560 FPAMKPDE---QAAPAP 573


>gi|256846712|ref|ZP_05552168.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256717932|gb|EEU31489.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 461

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 74/432 (17%), Positives = 141/432 (32%), Gaps = 68/432 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
           G   +   + L GWV ++R      F+++ D       Q+V       F+    +     
Sbjct: 11  GEDYLDKEIELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSISST 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++               +E+ A KIEI   A+ L  P+  +R   E +R K   
Sbjct: 71  IKVKGTLVKSQGSG-------QDLEVKADKIEIFQKAD-LEYPLQNKRHTFEYLRTK-AH 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++       NF+   TPI+T S  EGA +    + ++   
Sbjct: 122 LRARTNTFSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEMFRVTTLDMNK 181

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       + F   +   P FR E   + R   E
Sbjct: 182 LPKKENGEIDFTKDFFGKSTNLTVSGQLNVETFCAAFRNVYTFGPTFRAEYSNTARHASE 241

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +    +   E +++ V +   +       F                   
Sbjct: 242 FWMVEPEIAFGDLSANMELAEAMVKFVIKYVMDTCPEEMEFFNSFIEKGLFDKLNNVLNN 301

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+   +   +EH  +     F K + V    +     
Sbjct: 302 DFGRVTYTEAIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYFKKPVFVTDYPKEI--- 358

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR 390
                  +AF  ++NE  ++     L          G    +G   +  +          
Sbjct: 359 -------KAFYMKLNEDNKTVRAMDLL-------APGIGEIIGGSQREDSFELLTKRMKE 404

Query: 391 LDMQDGDSCFFI 402
           L + + D  F++
Sbjct: 405 LGLNEEDYEFYL 416



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P     +E K        F M           D  +++A   DL+  G  EI
Sbjct: 347 KPVFVTDYP-----KEIK-------AFYMK-------LNEDNKTVRAM--DLLAPGIGEI 385

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    E++ +    +G++    E  +       + G  PH G   G +R++M L 
Sbjct: 386 IGGSQREDSFELLTKRMKELGLN----EEDYEFYLDLRRFGSFPHSGYGLGFERMMMYLT 441

Query: 552 GAKNVREVSLFPMSQN 567
           G +N+R+V  FP + N
Sbjct: 442 GMQNIRDVIPFPRTPN 457


>gi|6321807|ref|NP_011883.1| Ded81p [Saccharomyces cerevisiae S288c]
 gi|731638|sp|P38707|SYNC_YEAST RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|500693|gb|AAB68874.1| Ded81p: Asparaginyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|151943961|gb|EDN62254.1| asparaginyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
 gi|190405803|gb|EDV09070.1| asparaginyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|256269240|gb|EEU04565.1| Ded81p [Saccharomyces cerevisiae JAY291]
 gi|259147047|emb|CAY80302.1| Ded81p [Saccharomyces cerevisiae EC1118]
 gi|285809921|tpg|DAA06708.1| TPA: Ded81p [Saccharomyces cerevisiae S288c]
 gi|323333337|gb|EGA74734.1| Ded81p [Saccharomyces cerevisiae AWRI796]
 gi|323354779|gb|EGA86613.1| Ded81p [Saccharomyces cerevisiae VL3]
          Length = 554

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/321 (21%), Positives = 124/321 (38%), Gaps = 29/321 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           S VG  V++SGW+HR+R +  +IF+ +RD  G  Q V + D A  +    +  E  + + 
Sbjct: 126 SKVGQRVKVSGWIHRLRSNKKVIFVVLRDGSGFIQCVLSGDLALAQQTLDLTLESTVTLY 185

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFLD 132
           G ++             G +EL+    E++ +A   E             S+    R L 
Sbjct: 186 GTIVKLPEG----KTAPGGVELNVDYYEVVGLAPGGEDSFTNKIAEGSDPSLLLDQRHLA 241

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR D L   +  R  ++ S+R     E+  E + P +  +  EG       +   + ++ 
Sbjct: 242 LRGDALSAVMKVRAALLKSVRRVYDEEHLTEVTPPCMVQTQVEGGSTLFKMNYYGEEAY- 300

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  +AS     + I   FR E   + R   E+  ++ E++F+  DD+L  
Sbjct: 301 -LTQSSQLYLETCLAS-LGDVYTIQESFRAEKSHTRRHLSEYTHIEAELAFLTFDDLLQH 358

Query: 253 MENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKP------D 292
           +E ++    +                 N       F+R+ Y DAI              D
Sbjct: 359 IETLIVKSVQYVLEDPIAGPLVKQLNPNFKAPKAPFMRLQYKDAITWLNEHDIKNEEGED 418

Query: 293 LRNPIIMHNVTEHFVHSEFRV 313
            +    +    E  +     V
Sbjct: 419 FKFGDDIAEAAERKMTDTIGV 439



 Score = 63.9 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 42/121 (34%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R    + ++  F  
Sbjct: 445 RFPVEIKSFYMKRCSDDPRVTESVDV-------LMPNVGEITGGSMRIDDMDELMAGFKR 497

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI      + +       + G  PHGG   G +RI+  L     VR+ SL+P     C 
Sbjct: 498 EGIDT----DAYYWFIDQRKYGTCPHGGYGIGTERILAWLCDRFTVRDCSLYPRFSGRCK 553

Query: 571 L 571
            
Sbjct: 554 P 554


>gi|323337256|gb|EGA78509.1| Ded81p [Saccharomyces cerevisiae Vin13]
 gi|323348346|gb|EGA82594.1| Ded81p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 554

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/321 (21%), Positives = 124/321 (38%), Gaps = 29/321 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           S VG  V++SGW+HR+R +  +IF+ +RD  G  Q V + D A  +    +  E  + + 
Sbjct: 126 SKVGQRVKVSGWIHRLRSNKKVIFVVLRDGSGFIQCVLSGDLALAQQTLDLTLESTVTLY 185

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFLD 132
           G ++             G +EL+    E++ +A   E             S+    R L 
Sbjct: 186 GTIVKLPEG----KTAPGGVELNVDYYEVVGLAPGGEDSFTNKIAEGSDPSLLLDQRHLA 241

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR D L   +  R  ++ S+R     E+  E + P +  +  EG       +   + ++ 
Sbjct: 242 LRGDALSAVMKVRAALLKSVRRVYDEEHLTEVTPPCMVQTQVEGGSTLFKMNYYGEEAY- 300

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  +AS     + I   FR E   + R   E+  ++ E++F+  DD+L  
Sbjct: 301 -LTQSSQLYLETCLAS-LGDVYTIQESFRAEKSHTRRHLSEYTHIEAELAFLTFDDLLQH 358

Query: 253 MENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKP------D 292
           +E ++    +                 N       F+R+ Y DAI              D
Sbjct: 359 IETLIVKSVQYVLEDPIAGPLVKQLNPNFKAPKAPFMRLQYKDAITWLNEHDIKNEEGED 418

Query: 293 LRNPIIMHNVTEHFVHSEFRV 313
            +    +    E  +     V
Sbjct: 419 FKFGDDIAEAAERKMTDTIGV 439



 Score = 63.9 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 42/121 (34%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R    + ++  F  
Sbjct: 445 RFPVEIKSFYMKRCSDDPRVTESVDV-------LMPNVGEITGGSMRIDDMDELMAGFKR 497

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI      + +       + G  PHGG   G +RI+  L     VR+ SL+P     C 
Sbjct: 498 EGIDT----DAYYWFIDQRKYGTCPHGGYGIGTERILAWLCDRFTVRDCSLYPRFSGRCK 553

Query: 571 L 571
            
Sbjct: 554 P 554


>gi|312883614|ref|ZP_07743339.1| asparaginyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368837|gb|EFP96364.1| asparaginyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 466

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 74/390 (18%), Positives = 133/390 (34%), Gaps = 58/390 (14%)

Query: 16  DVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWV 70
           +V S V + GW+   R    GI FL I D      + A    N ++   E+ K      V
Sbjct: 15  EVDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNNLNNYESEVLKLTTGCSV 74

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             + G V++  A+           EL+A  ++++   E+       +  +      +   
Sbjct: 75  -EVTGTVVASPAKG-------QDFELTATDVKVVGWVEDAETYPMAKTRHSIEYLREVAH 126

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-- 188
           L  R + +      R  +  ++      + +   S P++TAS  EGA +    S ++   
Sbjct: 127 LRPRTNVIGAVSRVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMEN 186

Query: 189 ------------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A    + +   P FR E+  + R   E
Sbjct: 187 LPRTESGNVDYNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAE 246

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSN 272
           F+ ++ E++F + +DI    E++L+ VF+                          N VS+
Sbjct: 247 FWMVEPEVAFADLNDIAKLSEDMLKYVFKAVLAECRDDLEFFAQRIDKEAITRLENFVSS 306

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           +F ++ Y DAI        D   P+   +   +EH        F   + V    +     
Sbjct: 307 DFAQVDYTDAIEILLESGRDFEFPVSWGIDLSSEHERFLAEEHFKAPVIVKNYPKDI--- 363

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                  R+  D     A     PG+  I 
Sbjct: 364 --KAFYMRSNDDGKTVAAMDVLAPGIGEII 391



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 76/228 (33%), Gaps = 28/228 (12%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG--DPLKFCSFAADAR 417
           FW ++     A +  +AK L+    + +   +  +  D   F A   D            
Sbjct: 247 FWMVEPEVAFADLNDIAK-LSEDMLKYVFKAVLAECRDDLEFFAQRIDKEAITRLENFVS 305

Query: 418 NHIAQ-------ELGIINCNCFEF--CWIMDFPFYEWNEEEKKIDFAHNPF------TMP 462
           +  AQ       E+ + +   FEF   W +D      + E ++     +          P
Sbjct: 306 SDFAQVDYTDAIEILLESGRDFEFPVSWGID-----LSSEHERFLAEEHFKAPVIVKNYP 360

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           +        ++         D++  G  EI  G  R    +++ Q    +GI        
Sbjct: 361 KDIKAFYMRSNDDGKTVAAMDVLAPGIGEIIGGAQREERLDILDQRMREMGIDP----EH 416

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                   + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 417 MSWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|307566317|ref|ZP_07628756.1| lysine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307344894|gb|EFN90292.1| lysine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 577

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/299 (19%), Positives = 118/299 (39%), Gaps = 25/299 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F++++D  G  QV    D  C    K + ++    +  +  
Sbjct: 52  REVVIAGRMMGRRIMGKASFIELQDSKGRIQVYITRDDLCPGEDKELYNKVFKKLLDIGD 111

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFKYRFLD 132
               +        G+I + A+++ +LS + +    V  +      +      R++ R++D
Sbjct: 112 FIGIKGFVFKTQMGEISVHARELSLLSKSLKPLPIVKYKDGEAYDKFDDPEQRYRQRYVD 171

Query: 133 LRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +   K+   KR  ++ +MR       + E  TP L   +    AR F+         
Sbjct: 172 LVVNDNVKDTFLKRATVLRTMRQFFDNAGYTEVETPTLQTIAGGASARPFITHFNALNTD 231

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + Y + L+  GF+  ++I   FR+E       P EF  +++ + + + + ++
Sbjct: 232 MY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRFHNP-EFTCMELYVQYKDYNWMM 289

Query: 251 NTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRR------YGTDKPDLR 294
              E +L  +    +                 F R+   DAI+       YG ++ ++R
Sbjct: 290 TFTEQLLEKICIAVNGKPEVQIGNKTINFKAPFKRLPILDAIKEKTGFDLYGKNEDEIR 348



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+A+     +      + F
Sbjct: 379 EGTYTQPTFITDYPIEMSPLTKTHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERF 438

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  +  ++          RA Q GMPP  GI  GIDR+VML+ G + ++EV LFP 
Sbjct: 439 IEQMKLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGKEYIQEVLLFPQ 498

Query: 565 SQ 566
            +
Sbjct: 499 MK 500


>gi|203287568|ref|YP_002222583.1| asparaginyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|201084788|gb|ACH94362.1| asparaginyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 461

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 74/386 (19%), Positives = 133/386 (34%), Gaps = 50/386 (12%)

Query: 1   MHRYRTHSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           MH+    S  + L      + + + GW+   R +G I FL+I D   I  + A  D    
Sbjct: 1   MHK----SIKEILNNPITNNTITVKGWIRTKRSNGKISFLEINDGSNIKGIQAVIDENNP 56

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  K    E+     G  +S +   I +       E+      I+  +++   P+  +R 
Sbjct: 57  QFEKK---EFKKLTTGASISLTGILILSPAKGQTYEIKTTNFYIIGESDQKTYPLQKKRH 113

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R +   L +R +T       + +I   +        F    TPI+T++  EG  +
Sbjct: 114 SFEFLR-EIPHLRIRTNTFGAVARIKNQISYKIHEYFQKNGFFYIHTPIITSNDGEGVGE 172

Query: 180 FLVPSRVN------------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
               S +N            +  F+   A      Q      A    + +   P FR E+
Sbjct: 173 IFRVSTLNLNNIENKKEIDFKDDFFGKQAFLTVTGQLHGEAYAMALSKIYTFGPTFRAEN 232

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN------------ 272
             + R   EF+ ++ EM+F   +D +N  E+ L+ V  E  N                  
Sbjct: 233 SNTTRHASEFWMIEPEMAFFTLEDNINLAEDFLKYVLSETLNHCHEDMEFFDNFIEKGVI 292

Query: 273 ---------NFLRICYDDAIRRYGTDKPDLR-NPIIMHNV-TEHFVHSEFRVFSKILSV- 320
                     F  I Y  AI++    K      P    ++ TEH  +    +  K  +V 
Sbjct: 293 KKIEDVINSKFEVITYTQAIKKLENAKKTFEIKPYWGMDLQTEHERYLTEEIIKKPTTVI 352

Query: 321 --NPGYEVWAIPAKGGGGNRAFCDRM 344
                ++ + +            D +
Sbjct: 353 DYPKEFKAFYMKMNQDNKTVKGMDIL 378



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + +                + G  PH G   G+
Sbjct: 378 LVPRIGEIIGGSEREDNLDKLNNRIKELNLET----ETLNWYLDLRRFGSTPHSGFGLGL 433

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R++    G  N+R+V  FP +  
Sbjct: 434 ERLLQYTTGMPNIRDVIPFPRTPK 457


>gi|327310528|ref|YP_004337425.1| aspartyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947007|gb|AEA12113.1| aspartyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 431

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 68/268 (25%), Positives = 125/268 (46%), Gaps = 14/268 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M   +TH   ++     G  V ++GWV  +R  G + F+ +RD  G  Q+         +
Sbjct: 1   MVPRKTHFTSEITPELNGREVVVAGWVWEIRDLGRVKFVVLRDREGFVQLTFKAGRTPDD 60

Query: 61  IAKS---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           +      +  E V+ + G+V +       + I    +E+  Q++ +++ A  LP+    E
Sbjct: 61  LLSKIPQLNKEDVVVVRGIVEA-------SKIAKSGVEVFPQEMWVVAKARPLPVD-LWE 112

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                  R KYR  DL+           + I+ ++R  +    F+E  TP + A+S EG 
Sbjct: 113 GTSDLPTRLKYRAADLKSPRNLAIFTTASEILKAVREVLYRHKFVEVFTPKIIATSTEGG 172

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +        + ++ A  Q+PQ YK+ L AS  +R F+IAP +R E   +D    EF  +
Sbjct: 173 AELFAVLYFERVAYLA--QSPQLYKEQLTAS-LERVFEIAPAYRAEKHNTDYHLNEFISI 229

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFS 265
           D E +F++ +DI++ +E ++R +    +
Sbjct: 230 DGEGAFMDYNDIMDVLEEIMRSIASVVN 257



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 68/359 (18%), Positives = 116/359 (32%), Gaps = 57/359 (15%)

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           +R  D +S R    F                 T   +L+ V E       V     +I  
Sbjct: 123 YRAADLKSPRNLAIFT----------------TASEILKAVREVLYRHKFVEVFTPKI-- 164

Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
              I        +L   +    V         +++ + L+ +        PA     +  
Sbjct: 165 ---IATSTEGGAELFAVLYFERVAYLAQS--PQLYKEQLTASLERVFEIAPAYRAEKHNT 219

Query: 340 FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNI--VNTEAIRVRLDMQDGD 397
               +NE+    G+   A++ +          M  +A  +N      E + +R  ++  D
Sbjct: 220 DY-HLNEFISIDGEG--AFMDYNDIMDVLEEIMRSIASVVNSRRDRLEKVGIRPVLEKVD 276

Query: 398 SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE-----FCWIMDFPFYEWNEEEKKI 452
               +  D       A         +L +              +I++FP           
Sbjct: 277 KIPRVDYDEAVERLRALGYDVKWGDDLTVEMQKALTKFYGPLYFIVNFP----------- 325

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
             +  PF   +         D    ++  YDL+ +G E+ SG  R H  E + +     G
Sbjct: 326 -ASLRPFYTKR------IDGDPKKTES--YDLILDGIEVVSGATRIHRREDLEREMRERG 376

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +        F      F  GMPPH G   G +R++M LLG KNVRE  L+P  +   + 
Sbjct: 377 LDPAA----FESHLSVFDWGMPPHAGFGMGFNRLLMSLLGLKNVREAVLYPRDRYRLEP 431


>gi|237740975|ref|ZP_04571456.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229431019|gb|EEO41231.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 461

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 68/390 (17%), Positives = 125/390 (32%), Gaps = 56/390 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
           G   +   + L GWV ++R      F+++ D       Q+V       F+    +     
Sbjct: 11  GEDYLDKEIELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSISST 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++               +E+ A KIEI   A+ L  P+  +R   E +R K   
Sbjct: 71  IKVKGTLVKSQGSG-------QDLEVKADKIEIFQKAD-LEYPLQNKRHTFEYLRTK-AH 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++       NF+   TPI+T S  EGA +    + ++   
Sbjct: 122 LRARTNTFSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEMFRVTTLDMNK 181

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       + F   +   P FR E   + R   E
Sbjct: 182 LPKKENGEIDFTKDFFGKSTNLTVSGQLNVETFCAAFRNVYTFGPTFRAEYSNTARHASE 241

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +    +   E +++ + +   +       F                   
Sbjct: 242 FWMIEPEIAFGDLGANMELAEAMVKSIIKYVMDNCPEEMEFFNSFIEKGLFDKLNNVLNN 301

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+   +   +EH  +     F K     P +      
Sbjct: 302 DFGRVTYTEAIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYFKK-----PVFVTDYPK 356

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                  +   D     A     PG+  I 
Sbjct: 357 EIKAFYMKLNEDGKTVRAMDLLAPGIGEII 386



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P     +E K        F M           D  +++A   DL+  G  EI
Sbjct: 347 KPVFVTDYP-----KEIK-------AFYMK-------LNEDGKTVRAM--DLLAPGIGEI 385

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    E++L     +G+ K      +       + G  PH G   G +R++M L 
Sbjct: 386 IGGSQREDSYEILLNRMEELGLDK----ESYEFYLDLRRFGSFPHSGYGLGFERMMMYLT 441

Query: 552 GAKNVREVSLFPMSQN 567
           G +N+R+V  FP + N
Sbjct: 442 GMQNIRDVIPFPRTPN 457


>gi|323497630|ref|ZP_08102647.1| asparaginyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323317379|gb|EGA70373.1| asparaginyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 466

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 125/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNN----LNNYENEVLKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPAKGQDFELAATDVKVVGWVEDAETYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++      + F   S P++TAS  EGA +    S ++        
Sbjct: 132 NVIGAVARVRNCLSQAIHRFYHEQGFFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 191

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 KGDVDYNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            E++F + +DI    E++L+ VF+           F                      ++
Sbjct: 252 PEVAFADLNDIAKLSEDMLKFVFKAVLEECRDDLEFFAQRIDKQAITRLEQFVSSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI+       +   P+   +   +EH        F   + V    +          
Sbjct: 312 DYTDAIQILLDSGREFEFPVEWGIDMSSEHERFLAEEHFKAPVIVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             RA  D     A     PG+  I 
Sbjct: 367 YMRANDDGKTVAAMDVLAPGIGEII 391



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 6/102 (5%)

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           ++ ND     A   D++  G  EI  G  R    +++ +    VGI              
Sbjct: 368 MRANDDGKTVA-AMDVLAPGIGEIIGGSQREERLDILDERMREVGIDP----EHMNWYRD 422

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 423 LRKYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|317051283|ref|YP_004112399.1| asparaginyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946367|gb|ADU65843.1| asparaginyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 448

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/344 (20%), Positives = 117/344 (34%), Gaps = 42/344 (12%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L        V + G V   R    I F+ I D      +    +    + A         
Sbjct: 10  LSGQHTEQSVTVCGLVRTCRQSKHITFIAINDGSCFESLQIISELPADQTAD-------- 61

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +      + +     Q EL AQ IEI   A     P+  +R   E +R     L
Sbjct: 62  ISTGTALRCHGHVVPSPGTGQQWELQAQSIEITGEA-PESYPLQKKRHSLEFLRGL-PHL 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS- 190
             R +T +     R+ + +++        F    TPI+TA+  EGA +    + +  G  
Sbjct: 120 RPRSNTFNAVFRLRSSLSHAIHRYFADLGFHWVQTPIITANDCEGAGEQFRVTTLPAGDT 179

Query: 191 -----FYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                F+  P +     Q +    A+   R +   P FR E+  + R   EF+ ++ E++
Sbjct: 180 HMEQDFFGRPASLTVSGQLEGEAFATALGRIYTFGPTFRSENSNTSRHLAEFWMVEPEVA 239

Query: 243 FVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRICYDD 281
           F + DDI+   E+ ++ +     +                       T + +F RI Y  
Sbjct: 240 FADLDDIMALAEDFVQSMVRHVCDTFAAELAFFEQHMEKGLLQKLQQTTAGSFARITYTQ 299

Query: 282 AIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
           AI            P+       +EH  +     F K + V   
Sbjct: 300 AIEILLEAPRSFTFPVAWGVDLQSEHERYLCEEHFQKPVFVTDY 343



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 58/147 (39%), Gaps = 26/147 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P        K+I      F M          +D  +++A  
Sbjct: 325 HERYLCEEHFQKPVFVTDYP--------KQIKA----FYMK-------LNDDGTTVRAM- 364

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  EI  G  R     V+ Q    +G+  E ++          + G  PH G  
Sbjct: 365 -DLLLPGIGEIIGGSQREDDIHVLQQRMEEIGLDMESMD----WYLELRRYGNQPHAGFG 419

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G++R++  + G  N+R+V  FP +  
Sbjct: 420 LGLERLLQYVTGVHNIRDVIPFPRAPK 446


>gi|254284100|ref|ZP_04959068.1| lysyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219680303|gb|EED36652.1| lysyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 496

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/336 (19%), Positives = 122/336 (36%), Gaps = 39/336 (11%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT   GDL                   +++G + R R      FL I +     Q+  N 
Sbjct: 39  RTAHAGDLQAEFSEETKEALESANRSFKVAGRLIRNRG----AFLLIEEGGDTIQLYVNR 94

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                E    +++  +  I        AE        G + ++ +   +L+ A   PLP 
Sbjct: 95  KGLSEETLAEIKAWDLGDI------VCAEGPLHKSGKGDLYINMETAGLLTKALR-PLPD 147

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R++DL     +      R+  IN +R  +    F+E  TP++    
Sbjct: 148 KYHGLADQELRYRQRYVDLIANPEVRDIFRVRSETINFIRRFLNDRGFMEVETPMMHPIP 207

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+          Y L  AP+ Y + L   GF++ +++   FR+E   +   P 
Sbjct: 208 GGAAAKPFVTHHNALDMDMY-LRIAPELYLKRLTVGGFEKVYEVNRNFRNEGLSTRHNP- 265

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  L+   ++ +  D ++  E +LR + +       V+              YG ++ D
Sbjct: 266 EFTMLEYYWAYADYRDAMDMTEQLLRELTQSVLGDTCVT--------------YGEEQFD 311

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
              P     V E  +H    +  + ++        A
Sbjct: 312 FGKPFARMTVVEAILHFNPDISLEAVADPDAARRLA 347



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 66/164 (40%), Gaps = 7/164 (4%)

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
           L+  +    AR  +A +LGI     +    +     +E    E ++         P    
Sbjct: 334 LEAVADPDAAR-RLASDLGIALKPSWGLGKV-QIEIFE-ATAEHRLQQPTFITAYPTEVS 390

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL- 525
              + ND       +++    G EIA+G    + +E   + F      KE  +       
Sbjct: 391 PLARRNDDDPFVTDRFEFFVGGREIANGFSELNDAEDQAERFRAQVAEKEAGDEEAMHYD 450

Query: 526 ---YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
               RA + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 451 HDYVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVLLFPHMR 494


>gi|29833838|ref|NP_828472.1| lysyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|29610963|dbj|BAC75007.1| putative lysyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 1093

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 102/257 (39%), Gaps = 11/257 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTH+      S  G  V ++G V  VR  GGI+F  +RD  G  Q+      +      +
Sbjct: 644 RTHTLARARGSPAGEQVTVAGRVMLVRDFGGIVFAVLRDWSGDLQLALTRSGSGP----A 699

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +         G  ++ +  T  ++   G+  +     ++       PLP           
Sbjct: 700 LDRFGKDADIGDHITATGRTGTSD--RGEPTVFVTDWQLTGKCLR-PLPDKHRGLADPEA 756

Query: 125 RFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLV 182
           + + R+LDL         +  R+  + ++R  ++   ++E  TP+L        AR F  
Sbjct: 757 KVRRRYLDLVASPDARAVVRARSTAVQALRQGLLDRGYLEVETPMLQQIHGGANARPFTT 816

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y L  AP+ Y + L   G ++ F++   FR+E       P EF  L+   +
Sbjct: 817 HINAYDLDLY-LRIAPELYLKRLCVGGLEKVFEMGRTFRNEGVSYKHNP-EFTMLEAYQA 874

Query: 243 FVEQDDILNTMENVLRG 259
           F + D +L+    +++G
Sbjct: 875 FADYDVMLDLTRELIQG 891



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 59/194 (30%), Gaps = 28/194 (14%)

Query: 379  LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
            ++    E +     ++        AG P        D    + + L  +        +  
Sbjct: 924  ISEALGEELDAGTSLEALHRHCDRAGVPYTADDGRGDVVLEMYERL--VEERTGLPTFYK 981

Query: 439  DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            DFP               +P T        L         A ++DLV  G E+ +     
Sbjct: 982  DFP------------TDVSPLTRQHRADPRL---------AERWDLVAFGTELGTAYSEL 1020

Query: 499  HMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
                   +  +   +                  A +  MPP GG+  G+DR+VM L G  
Sbjct: 1021 TDPMEQRRRLTAQSLLAAGGDPEAMELDEDFLDALEYAMPPTGGLGIGVDRLVMFLTGL- 1079

Query: 555  NVREVSLFPMSQNF 568
             +RE   FP+ +  
Sbjct: 1080 TIRETLPFPLVRRR 1093


>gi|299138524|ref|ZP_07031703.1| lysyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298599770|gb|EFI55929.1| lysyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 596

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 97/592 (16%), Positives = 192/592 (32%), Gaps = 134/592 (22%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +  +R  G   F  ++      Q+    D    ++ + + + + L   G  +   
Sbjct: 72  SIAGRIMAIRVQGKAGFAQLQQGGQRLQIYVRKD----DVGEDLFALYKLLDLGDHIGVR 127

Query: 82  AETINANIITGQIELSAQ------KIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
              +     TG++ L A        I  L+ A  LPLP          +R++ R+LDL  
Sbjct: 128 GYLMRTR--TGELTLHASPVNDKPAITFLTKA-MLPLPDKYSGLGDIELRYRRRYLDLFT 184

Query: 136 DT------------------------------------LHKNIVKRTRIINSMRCRMIAE 159
           DT                                      +  VKR  I+ ++R      
Sbjct: 185 DTGDFESEVPPSSDDTANDAPAPEIEPAGGMPVQTRAAAREVFVKRAAILRALRNFFDTR 244

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
            ++E  TP+L   +   A               ++  AP+ Y + L+  GFDR ++I   
Sbjct: 245 GYLEVETPMLHTIAGGAAARPFKTHHNALDIPLSMRIAPELYLKRLVVGGFDRVYEINRN 304

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           F        R  G   Q + E + +E               ++ ++N + + +    +  
Sbjct: 305 F--------RNEGVSTQHNPEFTMLEF--------------YQAYANYHDLMDLTQELIT 342

Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
             A    GT   +  N + +    +    ++  +   IL   P   +            A
Sbjct: 343 TVAKGVNGTTITNF-NGVEI----DLGKWTKLSMREAILRFWPENILAKPEVADFASANA 397

Query: 340 FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC 399
             + ++                R   +  +   G +  H ++   + +    +     + 
Sbjct: 398 MLEWLD----------------RAIANLPLQESGSIYAHPSVEVAKTLLHCREAIQSGTP 441

Query: 400 FFIAGDPLKFCSFAADARNHIAQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
           +                   IA+   I+   +  +   I DFP             A +P
Sbjct: 442 YGKC----------------IAELFEIVAEEHLIQPTIIYDFPL------------AVSP 473

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
            +  +                 +++    GFE+ +     +  +     F      +E  
Sbjct: 474 LSKVKPDEPDW---------VERFEFYIGGFEVGNAFSELNDPDDQRARFEAQLTERERG 524

Query: 519 ENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           ++          RA   G+PP GG   GIDR+ MLL G++++R+V LFP+ +
Sbjct: 525 DDEAHQMDEDYVRALGYGLPPTGGEGIGIDRLTMLLTGSRSIRDVILFPLMR 576


>gi|298372519|ref|ZP_06982509.1| lysine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275423|gb|EFI16974.1| lysine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 567

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 56/285 (19%), Positives = 113/285 (39%), Gaps = 19/285 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F++++D  G  Q+    +         + +     +  +  
Sbjct: 52  RQVCVAGRIMSRRIMGKASFVELQDSKGRIQIYIAGEDINTAEQPEMYNTVFKKLLDIGD 111

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------YPESIRFKYRFLD 132
               +        G+I + AQ++ +LS +      V  +             R++ R++D
Sbjct: 112 FIGIKGFIFRTRMGEISVHAQELTVLSKSIRPLPIVKYKDNEAFDAFDDPEQRYRQRYVD 171

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +  +    VKRT I  SMR    ++N+IE  TPIL        AR F+         
Sbjct: 172 LVVNDGIKDIFVKRTNIYRSMREYFDSQNYIEVETPILQPIPGGAAARPFITHHNALDIP 231

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  GF+  ++ +  FR+E       P EF  +++ +++ + + ++
Sbjct: 232 LY-LRIANELYLKRLIVGGFEGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKDYNWMM 289

Query: 251 NTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRRY 286
              E ++  +  + +                 F R+   DAI+ +
Sbjct: 290 EFTEKMVEKICLDVNGTTELKVGDNIISFKTPFKRVTMLDAIKEH 334



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 82/236 (34%), Gaps = 50/236 (21%)

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHI-AQELGIINCNCFEFCWIM 438
                  I  +L+++  D+                   + I  ++      +  +  +I 
Sbjct: 343 TEEQIRQIAQKLNIEVNDTMGK------------GKLIDEIFGEKC---EGSYIQPTFIT 387

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D+P  E +   K+              +              +++L+ NG E+A+     
Sbjct: 388 DYPI-EMSPLSKR--------HRSNPEL------------TERFELMVNGKELANAYSEL 426

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +     L+ F       E  ++          RA + GMPP  G+  G+DR+VML+ G  
Sbjct: 427 NDPIDQLERFQEQLRLSEKGDDEAMFIDMDFVRALEYGMPPTSGMGIGMDRLVMLMTGQA 486

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQ---------LRELGLRIVENPKKILKI 601
            ++EV LFP  +     +  +    +V +         L EL  +   + KK  K 
Sbjct: 487 AIQEVLLFPQMKPEKKPIELAEEEKTVFELLRKTEKILLEELKGKTELSNKKWDKA 542


>gi|223985647|ref|ZP_03635696.1| hypothetical protein HOLDEFILI_03002 [Holdemania filiformis DSM
           12042]
 gi|223962391|gb|EEF66854.1| hypothetical protein HOLDEFILI_03002 [Holdemania filiformis DSM
           12042]
          Length = 403

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/357 (19%), Positives = 133/357 (37%), Gaps = 44/357 (12%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           L GWV   R +G I F+++ D       Q+V + D A F+      +   L + G V+  
Sbjct: 30  LQGWVRTNRNNGSIGFIELNDGTYFRNAQLVYSSDLANFQDVSKYLTGTALTVTGKVVLT 89

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                         EL   ++ IL  A +   P+  +R   E +R +   L  R +T + 
Sbjct: 90  PQ-------AKQPFELQVTEV-ILEGACDNTYPLQKKRHSFEYLR-EIGHLRPRSNTFNA 140

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----SFY---A 193
               R+ +  ++      + F+  + PI+T +  EGA +    +  + G     F+   A
Sbjct: 141 VFRVRSVLAMAIHEFFQDQGFVYVNAPIITGNDAEGAGEVFTVTTRDDGNYEEDFFGKKA 200

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                 Q +    A  F   +   P FR E+  +     EF+ ++ E++F + +D ++ +
Sbjct: 201 NLTVSGQLQAEAFAMAFRDVYTFGPTFRAENSNTTTHASEFWMVEPEIAFADLEDDMDLI 260

Query: 254 ENVLRGVFEEFSNGNTVSNN---------------------FLRICYDDAIRRYGTDKPD 292
           E++++   +   +                            F+R+ Y +AI      K  
Sbjct: 261 EDMIKYCIQYVLDNCPEEMKFFNQFIDNTLLERLNHVLNSEFVRMPYTEAIEHLLKAKKK 320

Query: 293 LRNPI-IMHNV-TEHFVHSEFRVFSKI---LSVNPGYEVWAIPAKGGGGNRAFCDRM 344
             NP+    ++ TEH  +    V       +      + + +     G   A CD +
Sbjct: 321 FENPVSWGVDLNTEHERYLCEEVVKGPVFLIDYPKDIKAFYMRMNDDGKTVAACDLL 377


>gi|163754082|ref|ZP_02161205.1| lysyl-tRNA synthetase [Kordia algicida OT-1]
 gi|161326296|gb|EDP97622.1| lysyl-tRNA synthetase [Kordia algicida OT-1]
          Length = 561

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/350 (18%), Positives = 122/350 (34%), Gaps = 29/350 (8%)

Query: 7   HSCGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           H+   +  +   G  V ++G +   R  G   F +++D  G  QV  N D  C    KS 
Sbjct: 34  HTSKQVKETFAEGKQVIIAGRLMSRRIQGSASFAELQDADGKIQVYFNRDEICPGEDKSH 93

Query: 66  RS--EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------ 117
            +     L   G  +    E     +  G+  +  +   +LS A +       +      
Sbjct: 94  YNNVYKKLLDIGDFIGIEGELFTTKV--GEKTVMVKNFTLLSKALKPLPLPKEKDGVVYD 151

Query: 118 REYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           +      R++ R+ DL  +   K   VKRT++ N+MR       + E  TPIL       
Sbjct: 152 KFDDPEQRYRQRYADLVVNPEVKEVFVKRTKLFNAMRNFFNDAGYFEVETPILQPIPGGA 211

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A    V    +      +  A + Y + L+  GFD  ++ +  FR+E       P EF  
Sbjct: 212 AARPFVTHHNSLNIPLYMRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTA 270

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +++ +++ + + ++   E++L       +     +              +G  K D + P
Sbjct: 271 MEIYVAYKDYNWMMEFTESLLEHCAIAVNGTTEAT--------------FGEHKIDFKAP 316

Query: 297 IIMHNVTEHFVHSEFRVF--SKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                +T+  +              +    +   I      G     D +
Sbjct: 317 YKRVTMTQSIIDFTGFDITGKSEEELREAAKSMGIEVDETMGKGKLIDEI 366



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 372 EGNYIEPTFITDYPKEMSPLCKEHRENPELTERFELMVCGKEIANAYSELNDPIDQRERF 431

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  E  ++          RA + GMPP  G+  G+DR++M L    +++EV  FP 
Sbjct: 432 EAQLKLSEKGDDEAMFIDNDFIRALEYGMPPTSGLGIGMDRLIMYLTNNASIQEVLFFPQ 491

Query: 565 SQ 566
            +
Sbjct: 492 MK 493


>gi|88802055|ref|ZP_01117583.1| asparaginyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88782713|gb|EAR13890.1| asparaginyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 477

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 106/276 (38%), Gaps = 30/276 (10%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             V L GWV   R +    F+ + D   I   Q V + ++   E  K + +   +C+ G 
Sbjct: 17  QEVVLKGWVRTFRSNR---FIALNDGSTIHNIQCVIDFENTSEETLKRITTGAAVCVKGT 73

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++    +  +       +EL   +IEIL  +     P+  ++   E +R +   L +R +
Sbjct: 74  LLESQGKGQS-------LELQVLEIEILGDSNPDEYPIQPKKHSFEFLR-ENAHLRIRTN 125

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------- 189
           T    +  R+++  ++        F   +TPI+T S  EGA +    +            
Sbjct: 126 TFSAVMRVRSKLSFAVHKYFQDNGFNYVNTPIVTGSDAEGAGEMFRVTSFEDNKAPVTED 185

Query: 190 -------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+          Q +    A    + +   P FR E+  + R   EF+ ++ 
Sbjct: 186 GKIDYTKDFFGKETNLTVSGQLEAEAYAMALGKVYTFGPTFRAENSNTTRHLAEFWMIEP 245

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           E++F++ D  ++  E+ ++ V             FL
Sbjct: 246 EVAFMDLDGNMDLAEDFIKSVLTYVLEHCKDDLAFL 281



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 7/102 (6%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  +++A   D++  G  E+  G  R    +V++     + I ++ +          
Sbjct: 381 LNEDGKTVRAM--DVLFPGIGEMVGGAQREERYDVLIAKMKAMHIDEKELW----WYLDL 434

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            + G   H G   G +R+V    G  N+R+V  FP +    D
Sbjct: 435 RKFGTAVHSGFGLGFERLVQFTTGMGNIRDVIPFPRTPQNAD 476


>gi|299771104|ref|YP_003733130.1| lysyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298701192|gb|ADI91757.1| lysyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 509

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/302 (20%), Positives = 117/302 (38%), Gaps = 35/302 (11%)

Query: 4   YRTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL                   V+++G V   R      F+ I+D  G  Q+  
Sbjct: 47  KREHYAADLQEQFKDQSKEQIESAEHVYVKVAGRVMLNRGS----FMVIQDMTGRIQLYV 102

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +      +I ++++   +  I       +AE        G + +  +  E+L+ +   PL
Sbjct: 103 DRKGLPKDILETIKGLDLGDI------IAAEGYIGRSGKGDLYVHLEGFELLTKSLR-PL 155

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA 171
           P          ++++ R+LDL  +   +     R +++  +R  +  E F+E  TP++  
Sbjct: 156 PDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLNNERFMEVETPMMHV 215

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   
Sbjct: 216 IPGGASARPFETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHN 274

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDD 281
           P EF  ++   ++ +  D++   EN+L  +  +      V            F +I   D
Sbjct: 275 P-EFTMIEFYQAYADYKDLMQLTENMLEKLALDILGTTDVPYQGEVFSFKGPFKKISMFD 333

Query: 282 AI 283
           AI
Sbjct: 334 AI 335



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E K +         P       + ND  +    +++    G E+A+G    +   
Sbjct: 379 FEETVETK-LRQPTFITEYPAETSPLARRNDDNAHITDRFEFFIGGRELANGFSELNDPI 437

Query: 503 VMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F      K+  ++           A + G+PP  G   GIDR+VML   A ++R+
Sbjct: 438 DQAERFQAQVAEKDAGDDEAMHYDAEFVEALEYGLPPTAGEGIGIDRLVMLFADAPSIRD 497

Query: 559 VSLFPMSQN 567
           V LFP  + 
Sbjct: 498 VILFPHMRR 506


>gi|114663756|ref|XP_511115.2| PREDICTED: lysyl-tRNA synthetase isoform 2 [Pan troglodytes]
          Length = 611

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 59/287 (20%), Positives = 115/287 (40%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 141 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFIHINNKLRRGDIIGV 198

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +   +I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 199 QGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 255

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 256 QKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRVAP 314

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ 
Sbjct: 315 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMVS 373

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          ++ Y            D   P    N+ E 
Sbjct: 374 GMVKHITGSY-------KVTYHPDGPEGQAYDVDFTPPFRRINMVEE 413



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 493 KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 552

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 553 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMK 588


>gi|312090413|ref|XP_003146606.1| aspartyl-tRNA synthetase [Loa loa]
 gi|307758228|gb|EFO17462.1| aspartyl-tRNA synthetase [Loa loa]
          Length = 576

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/351 (20%), Positives = 129/351 (36%), Gaps = 35/351 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           D+  S  G  + + G +H  R  G   F+ IR       G+  V         +   ++ 
Sbjct: 122 DVLASLEGQEIWIRGRLHTSRIKGKTCFIIIRQRMCSIQGMLFVGEEISKQMLKFVGNIS 181

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------FGER 118
            E ++ I G+V     E    +    ++EL   ++ ++S AE                ++
Sbjct: 182 KESIIDIRGVVKKV--EQKITSCTQKEVELHVTQLFVVSAAEPRLPLQIEDAARLKEEDK 239

Query: 119 EYPE--------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
              E          R   R LDLR  T H     +  +    R  +    F+E  TP + 
Sbjct: 240 NTEESSLSVVNLDTRLDNRVLDLRTQTSHAIFSIQDGVCELFRNTLKKRGFMEIHTPKII 299

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           +++ EG  +    S     ++ A  Q+PQ YKQ+ +A+ FDR F I   FR ED  + R 
Sbjct: 300 SAASEGGANVFEVSYFKGSAYLA--QSPQLYKQMAIAADFDRVFTIGAVFRAEDSNTHRH 357

Query: 231 PGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             EF  LD+EM+F     ++L  +  V+  +F++                +   ++Y  +
Sbjct: 358 LTEFVGLDIEMAFKFHYHEVLEMIAAVMIDIFKDLKAKFKYE-------IETVGKQYPCE 410

Query: 290 KPDLRNPIIM---HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
             +   P ++    +  +    +   +  +     P         K     
Sbjct: 411 PFEFVEPAVILKYSDAVKLLRENGVEIGDEDDLSTPVERFLGRLVKEKYHT 461



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 76/212 (35%), Gaps = 23/212 (10%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
            ++  ++     +  V K       E +   + ++  D+   +  + ++      D    
Sbjct: 388 IFKDLKAKFKYEIETVGKQYPCEPFEFVEPAVILKYSDAVKLLRENGVEIGDE-DDLSTP 446

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + + LG +    +      DF   +      +   A  PF       +S          +
Sbjct: 447 VERFLGRLVKEKYH----TDFYVLD------RYPLAVRPFYTMPDAKDSK--------YS 488

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+   G EI SG  R H + ++ +   +  I       +      +F+ G PPH G 
Sbjct: 489 NSYDMFMRGEEILSGAQRIHDASLLTERAKHHQIDL----EKIRAYIDSFKYGCPPHAGG 544

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             G++R+ ML LG  NVR  SLFP        
Sbjct: 545 GIGLERVTMLFLGLGNVRLASLFPRDPKRITP 576


>gi|311263597|ref|XP_003129750.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           [Sus scrofa]
          Length = 477

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 114/264 (43%), Gaps = 19/264 (7%)

Query: 12  LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           LG  +V G  V++ GW+  VR    ++FL + D   +  +    DS+    ++ +     
Sbjct: 34  LGAQNVNGERVKVQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSSF--DSRELAFGSS 91

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++   ++  N       +EL A+KIE++   +    P+  +  +P     +Y  
Sbjct: 92  VEVQGQLVKSPSKGQN-------VELKAEKIEVVGNCDVKAFPLKYKERHPLEYLRQYPH 144

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-----R 185
           L  R + L   +  R+    ++        F+   TP++T++  EGA +          +
Sbjct: 145 LRCRTNVLGSILRVRSEATAAVHSFFKDSGFVHIHTPVITSNDCEGAGELFQVEPSSKIK 204

Query: 186 VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           V   +F+   A      Q    +M+  F + F   P FR E+ ++ R   EFY ++ E+S
Sbjct: 205 VPDENFFSVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQTRRHLAEFYMVEAEIS 264

Query: 243 FVEQ-DDILNTMENVLRGVFEEFS 265
           F+E   D++  ME + +       
Sbjct: 265 FLESLQDLMQVMEGLFKTATRAVL 288



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 25/156 (16%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
            A  H   E  ++        +++++P             +  PF M             
Sbjct: 344 GADLHTEHEKYLVKHCGDIPVFVINYPL------------SLKPFYMRDNED------GP 385

Query: 475 LSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
               A   DL+  G  E+  G +R      + Q  + +G+     +  +       + G 
Sbjct: 386 RHTVA-AVDLLVPGVGELFGGSLREERYHFLEQRLARLGL-----QEAYQWYLDLRRFGS 439

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            PHGG   G +R +  +LG  N+++V  FP   + C
Sbjct: 440 VPHGGFGMGFERYLQCILGIDNIKDVIPFPRFTHSC 475


>gi|117920749|ref|YP_869941.1| asparaginyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166232080|sp|A0KXL6|SYN_SHESA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|117613081|gb|ABK48535.1| asparaginyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 466

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 68/389 (17%), Positives = 119/389 (30%), Gaps = 50/389 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    GI FL + D      +     ++       V    + 
Sbjct: 12  GEHAVGSTVTVRGWVRTRRDSKAGISFLAVYDGSCFNPIQGVVPNSLENYDNEV----LK 67

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  + E + +       EL    +E+    E+        + +      +   L
Sbjct: 68  LTAGCSVIVTGEIVESPGAGQAYELQVTHVEVTGWVEDPDTYPMAAKRHSIEHLRELAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R + +      R  +  ++        F+  STP++TAS  EGA +    S ++    
Sbjct: 128 RPRTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAGEMFRVSTLDMENL 187

Query: 190 ------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRTSDGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ E++F    DI +  E +L+  F            F                    
Sbjct: 248 WMVEPEVAFATLSDIASLAEGMLKYAFNAVLAERMDDLQFFAQHVDKTVIERLQSFVSSD 307

Query: 276 --RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
             ++ Y DA+        +   P+   +   +EH  +     F   + V    +      
Sbjct: 308 FAQVDYTDAVDILQKCGREFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDI---- 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 364 -KAFYMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      + ++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDMRLEEMDLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+V  + G  N+R+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLVSYVTGVSNIRDVIPFPRAPR 462


>gi|296231610|ref|XP_002761205.1| PREDICTED: lysyl-tRNA synthetase isoform 1 [Callithrix jacchus]
          Length = 625

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 111/255 (43%), Gaps = 10/255 (3%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           R++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 155 RVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFIHINNKLRRGDIIGV 212

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +   +I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 213 QGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 269

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  M    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 270 QKFITRSKIITYIRSFMDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 328

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ 
Sbjct: 329 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMVS 387

Query: 259 GVFEEFSNGNTVSNN 273
           G+ +  + G  V+ +
Sbjct: 388 GMVKHITGGYKVTYH 402



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 4/108 (3%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 507 KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 566

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
            G+PP  G   GIDR+ M L  + N++EV LFP  +        +P+ 
Sbjct: 567 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMKPEDKKENVAPTE 614


>gi|320167790|gb|EFW44689.1| Nars-like protein [Capsaspora owczarzaki ATCC 30864]
          Length = 563

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 76/350 (21%), Positives = 134/350 (38%), Gaps = 25/350 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
            V+  G+ V++ GW+H +R  G  ++FL +RD  G  Q +   D      A  + +E  +
Sbjct: 135 TVAHRGTRVKVQGWLHNLRRQGKDMMFLVLRDGTGYLQCLLTGDMCRTIEAVKLETESTV 194

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G++                 EL+A   E++  A    L     +E    + F  R L
Sbjct: 195 SVFGIIKELPEG----KTAPDGHELAADYWELMGTAPAGGLDHAFNKESDPDVLFDNRHL 250

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR DT  K +  R+ +  + R       + E + P L  +  EG           + ++
Sbjct: 251 VLRTDTYSKILKLRSVVTQAFREHFFNRGYFEVTPPTLVQTMCEGGSTLFKLDYFGKEAY 310

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F++ + +L+
Sbjct: 311 --LTQSSQLYLETAIPAVGD-VFCIAQSYRAEKSRTRRHLTEYTHIEAECPFLDFETLLH 367

Query: 252 TMENVLRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI- 297
            +E+++  V E                N       F R+ Y DAI     +  D+R P  
Sbjct: 368 KLEDLVCDVVERVLASPYAGLLKELNPNFKAPKRPFRRMEYKDAIVWLKEN--DVRKPDG 425

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
             +   E    +  R  +  +        +    K     R   D R+ E
Sbjct: 426 TFYEFGEDIPEAPERAMTDKIGEPILLMRFPREIKAFYMQRDAGDQRLTE 475



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 43/122 (35%), Gaps = 13/122 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
           +       F M +   +      +        D++  G  EI  G +R    E +  A+ 
Sbjct: 454 RFPREIKAFYMQRDAGDQRLTESV--------DMLMPGVGEIVGGSMRIWNLEELEAAYR 505

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
              I        +       + G  PHGG   G+DR +  +    ++R+V  +P + + C
Sbjct: 506 REEIDPAE----YYWYIDQRRYGTCPHGGYGLGLDRFLTWMFNRDHIRDVCFYPRNIDRC 561

Query: 570 DL 571
             
Sbjct: 562 KP 563


>gi|86134315|ref|ZP_01052897.1| lysyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821178|gb|EAQ42325.1| lysyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 565

 Score =  179 bits (453), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 61/339 (17%), Positives = 124/339 (36%), Gaps = 29/339 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              V ++G +   R  G   F +++D  G  QV  N D  C    K++ ++    +  + 
Sbjct: 46  DKKVVIAGRLMSRRIQGKASFAELQDGEGRIQVYFNRDEICTGEDKTLYNDVYKKLLDIG 105

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKYRF 130
                E        G+  +  +  ++LS A +       + E           +R++ R+
Sbjct: 106 DFIGIEGTLFTTKVGEKTVMVKDFKLLSKALKPLPLPKVDAEGNTYDAFNDPEMRYRQRY 165

Query: 131 LDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
            DL  +   K   +KRT++ N+MR       + E  TP+L        AR F+       
Sbjct: 166 ADLVVNPNVKEVFIKRTKLFNAMRSFFNDAGYFEVETPVLQPIPGGAAARPFITHHNSLD 225

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y +  A + Y + ++  GFD  ++ +  FR+E       P EF  +++ +S+ + + 
Sbjct: 226 IPLY-MRIANELYLKRIIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVSYKDYNW 283

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEH 305
           +++  E +L       +  +  +              +G    D + P   + M +  +H
Sbjct: 284 MMDFCEQLLEHCAIAVNGTSKAT--------------FGEHNIDFKAPYARVTMADSIKH 329

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           F   +         +    +   I      G     D +
Sbjct: 330 FTGFDITG-KTEDEIREAAKGMNIEVDETMGKGKLIDEI 367



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 67/178 (37%), Gaps = 10/178 (5%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 373 EGNYIQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSELNDPIDQRERF 432

Query: 509 SNVGISKEVVENRF-----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +        ++           RA + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 433 EHQLKLAAKGDDEATEFIDHDFLRALEYGMPPTSGMGIGMDRLIMFLTNNQSIQEVLFFP 492

Query: 564 MSQNFCDLLMGSPS-TVSVEQLRELGLRIVENPKKILKISVTTILRNVYGLKIIHSIT 620
             +        +PS  ++ E+   L +       +++ +   + L N    K I  +T
Sbjct: 493 QMRPEK----KAPSVELNDEEKAVLAIITKAEKIELVTLKTQSGLSNKKWDKTIKGLT 546


>gi|269968459|ref|ZP_06182473.1| asparaginyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269826933|gb|EEZ81253.1| asparaginyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 472

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 123/385 (31%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +        V    +    G
Sbjct: 22  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNNLNNYEDEV----LKLTTG 77

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 78  CSVEVTGKIVESPAKGQDFELAATDVKVVGWVEDAETYPMAKTRHSIEYLREVAHLRPRT 137

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++        
Sbjct: 138 NVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 197

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 198 AGKVDYNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 257

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            E++F E DD+    E++L+ VF+           F                      ++
Sbjct: 258 PEVAFAELDDVAKLAEDMLKYVFKAVLAECRDDLEFFAQRIDKEAITRLEQFVSSDFAQV 317

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI+       +   P+   +   +EH        F   + V    +          
Sbjct: 318 DYTDAIQILLDSGREFEFPVEWGIDMSSEHERFLAEEHFKAPVIVKNYPKDI-----KAF 372

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             RA  D     A     PG+  I 
Sbjct: 373 YMRANDDGKTVAAMDVLAPGIGEII 397



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 6/102 (5%)

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           ++ ND     A   D++  G  EI  G  R    +++      VGI              
Sbjct: 374 MRANDDGKTVA-AMDVLAPGIGEIIGGSQREERLDILDARMREVGIDP----EHMSWYRD 428

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 429 LRKYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 470


>gi|307243900|ref|ZP_07526025.1| asparagine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492722|gb|EFM64750.1| asparagine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 466

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 68/377 (18%), Positives = 131/377 (34%), Gaps = 62/377 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEW 69
               +   V+++GW+   R      F+++ D      +    D      F     +    
Sbjct: 15  SEEYIDKTVKIAGWIRTSRISKSFGFMEVNDGSFFKNLQVVIDEKALDNFAQVSKLAISS 74

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + ++G +++      NA      IE+ A KI +   ++    P+  ++   E +R    
Sbjct: 75  SILVEGKLVAVD----NAKNP---IEIHASKIIVEGDSDS-SYPLQKKKHTFEYLR-TIA 125

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L  R +T       R+ +  ++       NF+   TP++T S  EGA +    + ++  
Sbjct: 126 HLRPRSNTFSAVFRVRSVVAFALHKFFNERNFVYAHTPLITGSDTEGAGEMFRVTTLDME 185

Query: 190 --------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                          F+   A      Q    +MA  F   +   P FR E+  + R   
Sbjct: 186 NPPLTKDGKVDYSKDFFGKEANLTVSGQLNGEIMALAFRNIYTFGPTFRAENSYTGRHAS 245

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-------------------- 272
           EF+ ++ E+ F + +D ++  E++++ V                                
Sbjct: 246 EFWMVEPEIVFADLEDNMDLAEDMIKYVINYVLEHCPEEMAFFNSFIDKGLLERLDNILN 305

Query: 273 -NFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
            NF RI Y +A+            P+       TEH  +   +V++  + V    +    
Sbjct: 306 SNFKRITYTEAVDILIKSGQKFEYPVEWGCDLQTEHERYITEQVYNAPVFVTDYPKDI-- 363

Query: 330 PAKGGGGNRAFCDRMNE 346
                   +AF  RMNE
Sbjct: 364 --------KAFYMRMNE 372



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 52/136 (38%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              ++ D+P        K I      F M           D  +++A   DL+  G  EI
Sbjct: 352 APVFVTDYP--------KDIKA----FYMRMNE-------DGKTVRAM--DLLVPGVGEI 390

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    +V++     +G++    E  +       + G   H G   G +RI+M L 
Sbjct: 391 IGGSQREERYDVLMNRIQELGLN----EEEYWWYLELRKFGTATHSGFGLGFERIIMYLT 446

Query: 552 GAKNVREVSLFPMSQN 567
           G  N+R+V  FP +  
Sbjct: 447 GMSNIRDVIPFPRTPK 462


>gi|289522352|ref|ZP_06439206.1| lysine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289504188|gb|EFD25352.1| lysine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 503

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/330 (19%), Positives = 121/330 (36%), Gaps = 30/330 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
              D  + ++ +G V  +R HG   F+ + D     Q+    D+   E     +      
Sbjct: 62  DEMDEDALIKTAGRVMAIRKHGKASFVHLEDDTDRLQLYFRFDTLNEEYEWFKKWVDTGD 121

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G+V              G++ L     ++LS A   PLP          +R++ R+LD
Sbjct: 122 YLGIV------GHPFRTKRGELSLLVTDFKLLSKALR-PLPEKWHGLKDTEVRYRQRYLD 174

Query: 133 LR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L     + +   KR +II + R  + +   +E  TP+L+  +    AR F+        +
Sbjct: 175 LIANPEVREVFRKRAKIIKTFREVLESHGTLEVETPMLSPIAGGATARPFITFHNALGIN 234

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+   ++R ++I   FR+E   S   P EF  +++  ++   DD++
Sbjct: 235 LY-LRIATELYLKRLIVGMYERVYEIGKNFRNEGIDSMHNP-EFTAMEVYWAYANYDDMM 292

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI---IMHNVTEHFV 307
           N  E ++    +   +                   YG    +   P     M ++ +   
Sbjct: 293 NLTEEIIVACADAMGSRQ---------------LPYGEHMINYEPPFRRATMVDLVKEHC 337

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
             +F   +         +   +  KG    
Sbjct: 338 GVDFLNITDE-EARRIAKERGLEIKGNESR 366



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 63/154 (40%), Gaps = 8/154 (5%)

Query: 418 NHIAQELGI-INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             IA+E G+ I  N      + +F  ++   E+K I          +    + +  D   
Sbjct: 350 RRIAKERGLEIKGNESRLLIMTEF--FDNFVEDKLIQPTFVLGYPVEISPLAKRDPDNPD 407

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++L   G E+A+     +      + F +    +E  +            A + G
Sbjct: 408 F-TRRFELFICGAEVANAFSELNDPLDQRERFLDQLKKREAGDEEAHVFDEDFVTALEHG 466

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +PP GG+  GIDR+ M L  + ++R+V LFP  +
Sbjct: 467 LPPTGGLGIGIDRLTMFLTNSSSIRDVILFPTMR 500


>gi|281342432|gb|EFB18016.1| hypothetical protein PANDA_017574 [Ailuropoda melanoleuca]
          Length = 625

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 58/276 (21%), Positives = 115/276 (41%), Gaps = 15/276 (5%)

Query: 6   THSCGDLGVSDVGS-----FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           TH   +      G       ++++G +H  R  G  +IF D+R      QV+AN  S  +
Sbjct: 134 THFIQEYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNY 191

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  +           G ++             G++ +   +I +LS      LP      
Sbjct: 192 KSEEEFIHINNKLRRGDIIGVQGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGL 248

Query: 120 YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
             +  R++ R+LDL  +   +   + R++II  +R  +    F+E  TP++        A
Sbjct: 249 KDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRTFLDELGFLEIETPMMNVIPGGAVA 308

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   
Sbjct: 309 KPFITYHNELDMNLY-MRVAPELYHKILVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTC 366

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +  M++ +  D++   E ++ G+ +  +    V+ +
Sbjct: 367 EFYMAYADYHDLMEITEKMISGMVQHITGSYKVTYH 402



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      + F     +K   ++           A +
Sbjct: 507 KEGLTERFELFIMKKEICNAYTELNDPVRQRELFEEQAKAKAAGDDEAMFIDENYCTALE 566

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDRI M L  + N++EV LFP  +
Sbjct: 567 YGLPPTAGWGMGIDRITMFLTDSNNIKEVLLFPAMK 602


>gi|251792588|ref|YP_003007314.1| asparaginyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247533981|gb|ACS97227.1| asparaginyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 467

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/388 (17%), Positives = 122/388 (31%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFE-IAKSVRSEWVLC 72
           +G  V + GWV   R    G+ FL + D       Q + N D   +E     + +   + 
Sbjct: 17  IGEKVTVRGWVRTRRDSKAGLSFLAVYDGSCFAPIQAIVNNDITNYESEVLRLTAGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+   AE          +EL A+ +E+    E+        + +      +   L 
Sbjct: 77  VAGTVVESPAEGQA-------VELQAENVEVAGWVEDPETYPMAAKRHSIEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ---- 188
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++     
Sbjct: 130 PRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDLENLP 189

Query: 189 ----------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 190 RTDKGTVDFSEDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-------------------- 275
            ++ E++F    D     E++L+ VF            F                     
Sbjct: 250 MIEPEVAFATLADNAKLAEDMLKYVFRAVLAERRDDLEFFAKHVDNDVINRLERFINSDF 309

Query: 276 -RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            ++ Y DAI            P+   +   +EH  +     F   + V    +       
Sbjct: 310 AQVDYTDAIEILLKSGKTFEFPVSWGIDLSSEHERYLAEEYFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R     ++ +  + +G++       +       +
Sbjct: 372 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLNMLDKRMAEMGLNP----EDYWWYRDLRR 426

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 427 YGTVPHSGFGLGFERLIVYVTGLQNIRDVIPFPRAPR 463


>gi|170070850|ref|XP_001869733.1| aspartyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167866765|gb|EDS30148.1| aspartyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 538

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 68/281 (24%), Positives = 113/281 (40%), Gaps = 24/281 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-----NPDSACFEIAKSV 65
           DL   +  + V + G VH  R  G   FL +R      Q V             + + SV
Sbjct: 85  DLSGCEKDALVWVRGRVHTTRSKGKQCFLVLRQQSSTVQCVVAVNDKTVSKQMVKFSGSV 144

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--------------EELP 111
             E ++ +   V+  +A+       T  +EL A +  ++S A              E+  
Sbjct: 145 PRESIVDVRARVVPVAAKIEACTEQT--LELHATEFYLVSAAKAQLPLQIEDAARPEKSD 202

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
            P   +    +  R   R LDLR             +    R  + A+ F E  TP + +
Sbjct: 203 DPEALKIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDILAAQGFTEIHTPKIIS 262

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +    S     ++ A  Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R  
Sbjct: 263 AASEGGANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHL 320

Query: 232 GEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVS 271
            EF  LD+EM+F     ++L+T+ N    +F+   +     
Sbjct: 321 TEFVGLDLEMAFKYHYHEVLDTIGNTFTEIFKGLRDNYARE 361



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF TMP                +  YD+   G EI SG  R H  E +++   
Sbjct: 430 KFPLAVRPFYTMPDPSNPKY---------SNSYDMFMRGEEILSGAQRIHDPEYLVERAK 480

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           +  I      ++      AF+ G PPH G   G++R+VML LG  N+R+ S+FP      
Sbjct: 481 HHAIDT----SKIAAYIEAFRFGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRL 536

Query: 570 DL 571
             
Sbjct: 537 TP 538


>gi|241889980|ref|ZP_04777278.1| asparaginyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863602|gb|EER67986.1| asparaginyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 428

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 80/343 (23%), Positives = 129/343 (37%), Gaps = 36/343 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWV 70
              +G  V L  W+   R  G I F  +R   G  Q +A  +S   E  + +R    E  
Sbjct: 7   KEQLGQKVTLGAWIANKRSSGKIAFFQLRYGAGFIQAIALKESLGEERYQQLRHLPQETS 66

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + GL+     E          IEL  +  E++S A + P+     +E+        R 
Sbjct: 67  LKVTGLIKENERELS-------GIELEIEDFEVISEAIDYPITP---KEHGVEFLADNRH 116

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           + +R    H  +  R ++I S       E F++   PILT+S+PEG  +       ++ +
Sbjct: 117 IWIRSKKQHAILTIRNQVIKSTYDFFEKEGFLKTDPPILTSSAPEGTTELFNTKYFDEEA 176

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F   D+ L
Sbjct: 177 Y--LSQSGQLYLE-ATAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEAEMAFCNHDESL 233

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIR---RYGTDKPD 292
              E  +  +  +                         F RI Y DAI+     G D  +
Sbjct: 234 ALQEAYVNHLLTDVLEKCQEQLKVLGRDLEALENARGEFPRIKYKDAIQLLKDNGFDDIE 293

Query: 293 LRNPIIMHNVTEHFVHSEFRVF--SKILSVNPGYEVWAIPAKG 333
             +     + T         VF     L + P Y +      G
Sbjct: 294 YGDDFGSPHETFIANSYNKPVFITHWPLDIKPFYMIEDPNEPG 336



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 42/132 (31%), Gaps = 22/132 (16%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +I  +P                PF M +   E         I    Y       EI 
Sbjct: 312 KPVFITHWPL------------DIKPFYMIEDPNEPGVVLCADLIAPEGY------GEII 353

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + +L+      ++       +G      + G   H G   G++R V  + G
Sbjct: 354 GGSQRIDDYDKLLENIKKHDLNL----EAYGWYLDLRKYGSVEHAGFGLGLERTVAWITG 409

Query: 553 AKNVREVSLFPM 564
             +VRE + FP 
Sbjct: 410 NGHVRETAPFPR 421


>gi|262279901|ref|ZP_06057686.1| lysyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262260252|gb|EEY78985.1| lysyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 509

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/283 (20%), Positives = 111/283 (39%), Gaps = 26/283 (9%)

Query: 4   YRTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL                   V+++G V   R      F+ I+D  G  Q+  
Sbjct: 47  KREHYAADLQEQFKDQSKEQIESAEHVYVKIAGRVMLNRGS----FMVIQDMTGRIQLYV 102

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +      +I ++++   +  I       +AE        G + +  +  E+L+ +   PL
Sbjct: 103 DRKGLPKDILETIKGLDLGDI------IAAEGYIGRSGKGDLYVHLEGFELLTKSLR-PL 155

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA 171
           P          ++++ R+LDL  +   +     R +++  +R  +  E F+E  TP++  
Sbjct: 156 PDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLNNERFMEVETPMMHV 215

Query: 172 -SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F           + L  AP+ Y + L+  GF+R F+I   FR+E   +   
Sbjct: 216 IPGGASARPFETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHN 274

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           P EF  ++   ++ +  D++   EN++  +  +      V   
Sbjct: 275 P-EFTMIEFYQAYADYKDLMALTENMIEKLALDILGTTDVPYQ 316



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 5/129 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E K +         P       + ND       +++    G E+A+G    +   
Sbjct: 379 FEETVETK-LRQPTFITEYPAETSPLARRNDDNPHVTDRFEFFIGGRELANGFSELNDPI 437

Query: 503 VMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F      K+  ++           A + G+PP  G   GIDR+VML   A ++R+
Sbjct: 438 DQAERFQAQVAEKDAGDDEAMHYDAEFVEALEYGLPPTAGEGIGIDRLVMLFADAPSIRD 497

Query: 559 VSLFPMSQN 567
           V LFP  + 
Sbjct: 498 VILFPHMRR 506


>gi|329767021|ref|ZP_08258549.1| asparaginyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328837746|gb|EGF87371.1| asparaginyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 428

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 81/343 (23%), Positives = 129/343 (37%), Gaps = 36/343 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWV 70
              +G  V L  W+   R  G I F  +R   G  Q +A  +S   E  + +R    E  
Sbjct: 7   KEQLGQKVTLGAWIANKRSSGKIAFFQLRYGAGFIQAIALKESLGEERYQQLRHLPQETS 66

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + GL+     E          IEL  +  E++S A + P+     +E+        R 
Sbjct: 67  LKVTGLIKENERELS-------GIELEIEDFEVISEAVDYPITP---KEHGVEFLADNRH 116

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           + +R    H  +  R +II S       E F++   PILT+S+PEG  +       ++ +
Sbjct: 117 IWIRSKKQHAILTIRNQIIKSTYDFFEKEGFLKTDPPILTSSAPEGTTELFNTKYFDEEA 176

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F   D+ L
Sbjct: 177 Y--LSQSGQLYLE-ATAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEAEMAFCNHDESL 233

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY---GTDKPD 292
              E  +  +  +                         F RI Y DAI+     G D  +
Sbjct: 234 ALQEAFVNHLLTDVLEKCQEQLKVLGRDIEALENARGEFPRIKYKDAIKLLKENGFDDIE 293

Query: 293 LRNPIIMHNVTEHFVHSEFRVF--SKILSVNPGYEVWAIPAKG 333
             +     + T         VF     L + P Y +      G
Sbjct: 294 YGDDFGSPHETFIANSYNKPVFITHWPLDIKPFYMIEDPNEPG 336



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 53/182 (29%), Gaps = 27/182 (14%)

Query: 388 RVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-----IINCNCFEFCWIMDFPF 442
              L+   G+       D +K              + G      I  +  +  +I  +P 
Sbjct: 262 IEALENARGEFPRIKYKDAIKLLKENGFDDIEYGDDFGSPHETFIANSYNKPVFITHWPL 321

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
                          PF M +   E         I    Y       EI  G  R    +
Sbjct: 322 ------------DIKPFYMIEDPNEPGVVLCADLIAPEGY------GEIIGGSQRIDDYD 363

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +L+      ++     + +G      + G   H G   G++R V  + G  +VRE   F
Sbjct: 364 KLLENIKKHDLNL----DTYGWYLDLRKYGSVEHAGFGLGLERTVAWITGNGHVRETVPF 419

Query: 563 PM 564
           P 
Sbjct: 420 PR 421


>gi|322378400|ref|ZP_08052854.1| lysyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322380081|ref|ZP_08054337.1| lysyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147488|gb|EFX42132.1| lysyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321149156|gb|EFX43602.1| lysyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 504

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 58/281 (20%), Positives = 114/281 (40%), Gaps = 18/281 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           L G +  +R  G   F+ I D   + QV  + +    E     +    +     V+    
Sbjct: 67  LVGRLRFIRLMGKACFIKIEDQSALLQVYLSQNDLGKESFDLFKKCVEVGDILNVVGYP- 125

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKN 141
                   TG++ L A   +IL+ +  +PLP          +R++ R+LDL    T+ + 
Sbjct: 126 ----FVTKTGELSLHATSYKILTKS-IVPLPEKFHGLSDIELRYRQRYLDLVVNPTVKEV 180

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQ 200
              R+ I+ ++R     + F+E  TP++   +    AR F+      +   Y L  AP+ 
Sbjct: 181 FKTRSVIVATIRRFFEEKGFLEVETPMMHPIAGGANARPFITYHNALEVERY-LRIAPEL 239

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF+  F+I   FR+E       P EF  L+   ++   +D++   + +   +
Sbjct: 240 YLKRLVVGGFEAVFEINRNFRNEGMDHSHNP-EFTMLEFYWAYKTYEDLITLTQELFHKL 298

Query: 261 FEEFS--------NGNTVSNNFLRICYDDAIRRYGTDKPDL 293
            +  +        +     + F  + +  A+   G  + +L
Sbjct: 299 LQVLNLPLKIPYQDQEIDFSAFRVLSFKQALIEVGGLEAEL 339



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 4/126 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + ND     A +++L   G EIA+G    +      Q F
Sbjct: 376 ESKLINPTFITEYPIEISPLARRNDTNPAIADRFELFIAGKEIANGFSELNDPLDQYQRF 435

Query: 509 SNVGISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +KE  +            A   GMPP  G   GIDR+VMLL  +K +++V LFP 
Sbjct: 436 EEQVKAKESGDEEAQLMDTDYVWALGLGMPPTAGEGIGIDRLVMLLTNSKTIKDVILFPA 495

Query: 565 SQNFCD 570
            +   D
Sbjct: 496 MKPEKD 501


>gi|242006049|ref|XP_002423869.1| aspartyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212507103|gb|EEB11131.1| aspartyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 532

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 128/346 (36%), Gaps = 28/346 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVRS 67
           L     G  V++ G +   R  G   F+ +R           V         + A  +  
Sbjct: 80  LNEKLSGVLVKVRGRLQTSRAKGKQCFIVLRQQQYTIQCFLCVNDVVSKQMVKFASVISK 139

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--------EELPLPVFGERE 119
           E ++ +DG++ + + +  +       +EL  +++ ++S A        E+   P+    +
Sbjct: 140 ESIIDVDGVIQTVAQKIESCTQK--DVELHVKELFVVSSAKSQLPLLIEDASRPIKSSED 197

Query: 120 YP-------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                    +  +   R LDLR             +    R  + ++ F+E  TP + ++
Sbjct: 198 NDALNIKVNQDTKLDNRVLDLRTPANQAIFKLEAGVCKLFRDILTSKGFVEIHTPKIISA 257

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + EG  +    S     ++ A  Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R   
Sbjct: 258 ASEGGANVFTVSYFKTSAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLT 315

Query: 233 EFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           EF  LD+EM+F     ++++ + +    +F             +R     A+  +    P
Sbjct: 316 EFVGLDLEMAFKFHYHEVVDVIADTFTDIFINLQKLYHQEIEIIR--QQYAVEPFKFLVP 373

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            LR  +   +       +   +  +     P  ++     K     
Sbjct: 374 PLR--LEFKDAITLLGEAGVTLGEEDDLSTPDEKLLGRIVKAKYDT 417



 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 18/170 (10%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE---KKIDFAHNPFTM 461
           +     +   +A   + +E  +   +      I+     +++ +     K   +  PF  
Sbjct: 378 EFKDAITLLGEAGVTLGEEDDLSTPDEKLLGRIVKA---KYDTDFYILDKYPLSVRPFYT 434

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
                     N+  +  +  YD+   G EI SG  R H +E + +   + GI  + ++  
Sbjct: 435 MPD------PNNPKA--SNSYDMFMRGEEILSGAQRIHDAEFLCERALHHGIDLQKIKA- 485

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
                 AF+ G PPH G   G++R+VML LG  N+R+ S+FP        
Sbjct: 486 ---YIDAFKYGCPPHAGGGIGLERVVMLYLGLDNIRKTSMFPRDPKRLTP 532


>gi|225575661|ref|ZP_03784271.1| hypothetical protein RUMHYD_03754 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037118|gb|EEG47364.1| hypothetical protein RUMHYD_03754 [Blautia hydrogenotrophica DSM
           10507]
          Length = 484

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 59/372 (15%), Positives = 114/372 (30%), Gaps = 61/372 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVLCID 74
           +   + + GWV  VR      F+ + D      +    +     F     +     + + 
Sbjct: 38  LDKEITVGGWVRSVRDSKTFGFIVLHDGTFFETLQIVYHDQMENFAEISKLNVGAAIVVK 97

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G +++               E+ A +IE+  ++         ++ +          L  R
Sbjct: 98  GTLVATPQ-------AKQPFEIQATEIEVEGMSAPDYPLQ--KKRHSLEYLRTITHLRPR 148

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------ 188
            +T       R+    ++        F+  +TP++T S  EGA +    + ++       
Sbjct: 149 TNTFQAVFRVRSLTAYAIHRFFQERGFVYVNTPLITGSDCEGAGEMFRVTTLDPVNPPLK 208

Query: 189 --------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 209 EDRTVDYGQDFFGKETNLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAEFWMI 268

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF----------------------- 274
           + E +F +  D ++  E +L+ V            NF                       
Sbjct: 269 EPECAFADLQDNMDLAEAMLKYVISYVLENAPEEMNFFNSFIDKGLLDRLNHVLNSEFGH 328

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           +       I     DK D +        TEH  +   +VF K + V    +         
Sbjct: 329 VTYTEAVEILEKNNDKFDFKVYWGCDLQTEHERYLTEQVFKKPVFVTDYPKEI------- 381

Query: 335 GGNRAFCDRMNE 346
              +AF  ++NE
Sbjct: 382 ---KAFYMKLNE 390



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 50/139 (35%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P     +E K        F M           D  ++ A    LV    EI 
Sbjct: 370 KPVFVTDYP-----KEIK-------AFYMK-------LNEDGKTVAAMDC-LVPGIGEII 409

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + + +    +G+        +       + G   H G   G +R VM L G
Sbjct: 410 GGSQREDDYDKLKKRMDELGLKP----EDYDFYMDLRKYGSTRHSGYGLGFERCVMYLTG 465

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP +   CDL
Sbjct: 466 MSNIRDVIPFPRTVKNCDL 484


>gi|19112684|ref|NP_595892.1| cytoplasmic lysine-tRNA ligase Krs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74626015|sp|Q9UUE6|SYKC_SCHPO RecName: Full=Lysyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|5738524|emb|CAB52801.1| cytoplasmic lysine-tRNA ligase Krs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 591

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 112/260 (43%), Gaps = 12/260 (4%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIA---KSVRSEWVLCID 74
            V ++G V  +R  G  + F +I  D   +  +    D+   + A   + +R   ++ I 
Sbjct: 125 EVAVAGRVLGLRTAGNKLRFYEIHADGKKLQVMCQAQDADTVDFAAQHEHLRRGDIIGIR 184

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G        +       G++ + A++  +LS    + LP          IR + R+LDL 
Sbjct: 185 GY----PGRSNPKGRADGELSIFARQCVLLSPCLRM-LPKEHYGLKDLEIRHRQRYLDLI 239

Query: 135 RDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +   +   V R+RII  +R    + +F+E  TP++   +        V    +      
Sbjct: 240 MNRSTRDRFVMRSRIIQYIRHFFDSRDFMEVETPMMNMIAGGATAKPFVTHHNDLDMDLY 299

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  AP+ Y ++L+  G DR ++I   FR+E       P EF  ++   ++ +  D+++T 
Sbjct: 300 MRIAPELYLKMLVVGGLDRVYEIGRQFRNEGADLTHNP-EFTSIEFYQAYADYYDLMDTT 358

Query: 254 ENVLRGVFEEFSNGNTVSNN 273
           E +L G+ ++ +    V  +
Sbjct: 359 EELLSGLVKDLTGSYKVPYH 378



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
            +    +++      EI +     +        F      K   ++           A +
Sbjct: 483 DAGLCERFEAFVATKEICNAYTELNDIFDQRARFEEQARQKAQGDDEAQIIDENFCTALE 542

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG   G+DR+VM L  +  +REV LFP  +
Sbjct: 543 YGLPPTGGWGMGVDRLVMFLTDSNTIREVLLFPHMK 578


>gi|332846548|ref|XP_003315273.1| PREDICTED: lysyl-tRNA synthetase isoform 1 [Pan troglodytes]
          Length = 625

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 59/287 (20%), Positives = 115/287 (40%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 155 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFIHINNKLRRGDIIGV 212

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +   +I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 213 QGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 269

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 270 QKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRVAP 328

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ 
Sbjct: 329 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMVS 387

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          ++ Y            D   P    N+ E 
Sbjct: 388 GMVKHITGSY-------KVTYHPDGPEGQAYDVDFTPPFRRINMVEE 427



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 507 KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 566

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 567 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMK 602


>gi|118431776|ref|NP_148450.2| aspartyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|6919973|sp|Q9Y9U7|SYD_AERPE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116063098|dbj|BAA81203.2| aspartyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 442

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 124/255 (48%), Gaps = 15/255 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEW 69
             S VG  VR+ GW +R+R  G + F+ +RD  G+ Q       +  +    A+ ++ E 
Sbjct: 14  KESLVGGRVRVCGWAYRIRDLGRLKFILVRDRSGVIQATVKRGESPEDALRAAEDLKLES 73

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKY 128
           V+C++G +                +E+  +++E+LS   E LPL V G  +     R KY
Sbjct: 74  VVCVEGELRQAPTRE--------GVEVKVERLEVLSTPVEPLPLEVEGSEKASLPTRLKY 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LD+R   +         +    R    ++ F+E  TP + A+  E   +       ++
Sbjct: 126 RWLDIRNPMVSAIFELEAMVAKVFRDYYWSQGFVEIFTPKIVAAGTESGAEVFPVVYFDK 185

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QD 247
            +F A  Q+PQ YKQ  + +G +R F+I P FR E   + R   E++ LD+E+ F+E  +
Sbjct: 186 TAFLA--QSPQFYKQFAVIAGLERVFEIGPVFRAEPHHTSRHLNEYHSLDIEVGFIESYN 243

Query: 248 DILNTMENVLRGVFE 262
           D++N +E  +R +  
Sbjct: 244 DVMNYVEGFMRAIVR 258



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F +I+++P+               PF   +   E            + +DL+  G EI 
Sbjct: 328 DFVFIVEYPW------------KVRPFYTMRKDDEP--------SWTYSFDLLYRGLEIV 367

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H    +L+   + G+        F      F+ G PPHGG   G++RIVM  L 
Sbjct: 368 TGGQREHRYHRLLENLRDKGLDA----ESFQFYLDFFKHGAPPHGGAGMGLERIVMQTLK 423

Query: 553 AKNVREVSLFPMSQNFCDL 571
            +N+RE  + P        
Sbjct: 424 LENIREARMLPRDTERITP 442


>gi|257215916|emb|CAX83110.1| lysyl-tRNA synthetase [Schistosoma japonicum]
          Length = 364

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/268 (23%), Positives = 120/268 (44%), Gaps = 11/268 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           + +Y + S G+  ++D+   V +SG VH  R  G  +IF DIR      QV+AN      
Sbjct: 70  IEKYSSLSPGE-HLNDI--SVSISGRVHAKRSAGSKLIFYDIRSEDCQLQVMANIRHYKS 126

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E      +E +    G ++  +     + +  G++ +   +I +LS      LP      
Sbjct: 127 EAEFHAINEVIHL--GDIIGCAGSPGKSKL--GELSIIPHEITLLSPCL-YQLPHMHYGV 181

Query: 120 YPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
             +  RF+ R+LDL   + + +  + R RI+N +R  +    F+E  TP++   +   A 
Sbjct: 182 KDKETRFRQRYLDLLMNEEVRRRFITRARIVNYVRKFLDDLGFLEVETPMMNTIAGGAAA 241

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
              +           +  AP+ Y ++L+  G +R +++   FR+E       P EF   +
Sbjct: 242 KPFITYHNELNMNLYMRVAPELYLKMLVIGGLNRVYELGRVFRNEGIDLTHNP-EFTSCE 300

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN 266
             M++ + +D++   E++L G+ +    
Sbjct: 301 FYMAYADYEDLMTITEDLLSGLVKHLFG 328


>gi|224613430|gb|ACN60294.1| Lysyl-tRNA synthetase [Salmo salar]
          Length = 569

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 101/556 (18%), Positives = 171/556 (30%), Gaps = 121/556 (21%)

Query: 23  LSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFE-----IAKSVRSEWVLCIDGL 76
           +SG VH  R  G  +IF D+R      QV+A   S   E     I   +R   ++ + G 
Sbjct: 108 VSGRVHAKRESGAKLIFYDLRGEGVKLQVMATNRSYKSEGEFVRINNKLRRGDIIGVRG- 166

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-R 135
                          G++ +   ++ +LS      LP        +  RF+ R+LDL   
Sbjct: 167 --------NPGKTKKGELSIIPIEMTLLSPCL-HMLPHLHFGLKDKETRFRQRYLDLILN 217

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYAL 194
           D + +  V R +II  +R  +    F+E  TP++        A+ F+        + Y +
Sbjct: 218 DYVRQKFVTRAKIITYLRSFLDELGFLEIETPMMNLIPGGAVAKPFVTYHNDLDMNLY-M 276

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G DR ++I   FR+E                          ++   
Sbjct: 277 RIAPELYHKMLVVGGIDRVYEIGRQFRNEG-------------------------IDLTH 311

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
           N                         +    Y  D  DL       ++TE       ++ 
Sbjct: 312 N-------------------PEFTTCEFYMAYA-DYHDL------MDITE-------KLL 338

Query: 315 SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGP 374
           S ++    G        +G  G     D    + R         +    D    +    P
Sbjct: 339 SGMVKHITGGYKVKYHPEGPEGPTYEIDFTPPFRR---------VSMTHDLEKEMGVKFP 389

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
            A   +   T      L  Q G         P             +   L +    C   
Sbjct: 390 AADTYDSDETRKFFDELCAQKG----VECPPPRTTARLLDKL---VGDFLEVT---CINP 439

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            +I D                 +P  M                   +++L     EI + 
Sbjct: 440 TFICD-----------------HPQIMSPLAKWHRSE----KGLTERFELFVLKKEICNA 478

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
               +      + F     +K   ++           A + G+PP  G   GIDR+ M L
Sbjct: 479 YTELNDPIRQRELFEQQAKAKAEGDDESMSVDETFCTALEYGLPPTAGWGMGIDRLTMFL 538

Query: 551 LGAKNVREVSLFPMSQ 566
             + N++EV  FP  +
Sbjct: 539 TDSNNIKEVLFFPAMK 554


>gi|221134750|ref|ZP_03561053.1| lysyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 522

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 114/262 (43%), Gaps = 16/262 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            + +      ++G +   R      FL ++D  G  Q  A+ D+      K +++ +   
Sbjct: 55  TLEEQAHTASIAGRIMAKRGP----FLLLQDMSGQIQAYASKDTQ-----KDIKARFGSL 105

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G ++      +      G + ++  + E+L+ +   PLP        +  +++ R++D
Sbjct: 106 DIGDIIGVKG--VVHKSGKGDLYVNMDEYELLTKSLR-PLPEKFHGLADQETKYRQRYVD 162

Query: 133 LRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L          + R++I+N +R  +   +F+E  TP+L        A+ F+         
Sbjct: 163 LITSPETRATFLLRSKIVNGIRSFLADRDFMEVETPMLQVIPGGATAKPFVTHHNALDID 222

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   ++ + +D++
Sbjct: 223 MY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMIEFYQAYADYNDLM 280

Query: 251 NTMENVLRGVFEEFSNGNTVSN 272
           +  E++L+ + +       V N
Sbjct: 281 DLTEDMLKHLAQNVLGTTIVKN 302



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 12/148 (8%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   EE+ +D        P       + ND       +++    G E+A+G    + SE
Sbjct: 382 FEATAEEQ-LDQPTFITEYPWEVSPLARRNDDNHFITDRFEFFVGGRELANGFSELNDSE 440

Query: 503 VMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
                F      K+  ++           A + GMPP  G   GIDR+VML   +  +++
Sbjct: 441 DQAARFKKQVEEKDAGDDEAMHFDEDYITALEYGMPPTAGEGIGIDRLVMLFSDSPTIKD 500

Query: 559 VSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
           V LFP        +   P+      L++
Sbjct: 501 VILFPH-------MKPVPTDTPDADLKD 521


>gi|88859211|ref|ZP_01133851.1| asparaginyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88818228|gb|EAR28043.1| asparaginyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 465

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/387 (17%), Positives = 123/387 (31%), Gaps = 55/387 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCI 73
           V S V + GW+   R    GI FL + D       Q V       +    ++ +   + +
Sbjct: 16  VDSQVTVKGWIRTRRDSKAGISFLAVHDGSCFDPIQAVVPNSLNNYNDVTTLTAGCSVEV 75

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +  +        E+ A ++ I+ + E         + +      ++  L  
Sbjct: 76  TGKLVRSEGQGQS-------FEIQADEVNIVGMVENPDTYPMAAKRHSIEYLREHAHLRP 128

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ----- 188
           R + +      R  +  ++        F+  STPI+TAS  EGA +    S ++      
Sbjct: 129 RTNMIGAVTRVRNCLAQAIHRFYHERGFLWISTPIITASDCEGAGEMFRVSTLDMQNLPR 188

Query: 189 ---------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+   A      Q       S     +   P FR E+  + R   EF+ 
Sbjct: 189 DDKGNVDYSEDFFGKEAFLTVSGQLNGETYCSAMSNIYTFGPTFRAENSNTSRHLAEFWM 248

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNFL 275
           ++ E++F + +DI    E++L+ VF                             V  +F 
Sbjct: 249 VEPEVAFADLNDIAKLAEDMLKYVFSAVLAERRDDMEFFAERVEKTAISRLESFVEKDFA 308

Query: 276 RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           ++ Y DAI             +       +EH  +     F   + +    +        
Sbjct: 309 QVDYTDAIEILKNCGKKFEFAVEWGVDLQSEHERYLAEVHFEAPVVIKNYPKDI-----K 363

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIF 360
               R   D     A     PG+  I 
Sbjct: 364 AFYMRQNEDGKTVAAMDVVAPGIGEII 390



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 79/229 (34%), Gaps = 30/229 (13%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FW ++     A +  +AK L     + +   +  +  D   F A    K     +   + 
Sbjct: 246 FWMVEPEVAFADLNDIAK-LAEDMLKYVFSAVLAERRDDMEFFAERVEKTA--ISRLESF 302

Query: 420 IAQELGIIN-----------CNCFEFC--WIMDFPFYEWNEEEKKIDFAHN-----PFTM 461
           + ++   ++              FEF   W +D      +E E+ +   H          
Sbjct: 303 VEKDFAQVDYTDAIEILKNCGKKFEFAVEWGVDL----QSEHERYLAEVHFEAPVVIKNY 358

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
           P+         +         D+V  G  EI  G  R    +++      +G++K    +
Sbjct: 359 PKDIKAFYMRQNEDGKTVAAMDVVAPGIGEIIGGSQREERLDILDARLEEMGLNK----D 414

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +       + G  PH G   G +R+V  + G  NVR+V  FP ++   
Sbjct: 415 DYSWYRDLRKYGTVPHSGFGLGFERLVAYVTGMGNVRDVIAFPRTKGSA 463


>gi|310659670|ref|YP_003937391.1| asparaginyl tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308826448|emb|CBH22486.1| asparaginyl tRNA synthetase [Clostridium sticklandii]
          Length = 464

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/427 (16%), Positives = 145/427 (33%), Gaps = 68/427 (15%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  + + GW+  +R      F+++ D       Q+V +     F+    +     + + G
Sbjct: 19  GKEIVIQGWIRTLRDSKNFGFIEVNDGSFFKNLQIVFDETLDNFKDVAKLPIATAIKVTG 78

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++                E+ A+ I + + +     P+  +R   E +R     L  R 
Sbjct: 79  DLVKTEG-------AKQPFEIKAKSIVVEAPSSSDF-PLQKKRHTFEYLR-TIAHLRPRS 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV--------- 186
           +        R+    ++        F+   TPI+T S  EGA +    + +         
Sbjct: 130 NAFSAVFRVRSVAAYAIHKFFQDRGFVYVHTPIITGSDAEGAGEMFRVTTLDLKNPPKNA 189

Query: 187 -----NQGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                N   F+          Q +  + A  +   +   P FR E+  + R   EF+ ++
Sbjct: 190 DGSIDNTQDFFGKETNLTVSGQLEGEIFALAYKDIYTFGPTFRAENSNTSRHAAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F E +D +   E++++ +                            N VSN+F R+
Sbjct: 250 PEIAFAELEDNMELAEDMIKYIISYVLENAPEEMEFFGSIVDKDLLPRLQNVVSNDFGRV 309

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y +AI+       +   P+   M   TEH  +   ++F K + V    +          
Sbjct: 310 TYTEAIKLLQESGHNFEYPVSWGMDLQTEHERYITEQIFKKPVFVTDYPKEI-------- 361

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             +AF  R+NE  ++     L          G    +G   +             + + +
Sbjct: 362 --KAFYMRLNEDEKTVAAMDLLV-------PGIGEIIGGSQREEREDVLAGKIRAMGLNE 412

Query: 396 GDSCFFI 402
            D  +++
Sbjct: 413 EDYWWYL 419



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 49/134 (36%), Gaps = 26/134 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P     +E K        F M     E               DL+  G  EI
Sbjct: 350 KPVFVTDYP-----KEIK-------AFYMRLNEDEKTVA---------AMDLLVPGIGEI 388

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    +V+      +G++    E  +       + G   H G   G +R++M L 
Sbjct: 389 IGGSQREEREDVLAGKIRAMGLN----EEDYWWYLELRKYGGVKHAGYGLGFERMIMYLT 444

Query: 552 GAKNVREVSLFPMS 565
           G  N+R+V  FP +
Sbjct: 445 GMTNIRDVIPFPRT 458


>gi|116751160|ref|YP_847847.1| lysyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116700224|gb|ABK19412.1| lysyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 496

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/312 (19%), Positives = 123/312 (39%), Gaps = 20/312 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA- 62
           Y   S  +L  S       ++G +  +R  G  IF+ + D  G  Q+    +    E   
Sbjct: 43  YADKSAEELEASP--ETFTVAGRILSLRSFGKSIFMHVLDAGGRVQLYVQQNQVGKETYA 100

Query: 63  --KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K +    ++ + G +             T ++ L  +++ +L+     PLP       
Sbjct: 101 LTKKLDIGDLVRVTGTL---------FRTRTNELTLLVRELRLLTKNLR-PLPEKYHGLK 150

Query: 121 PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGAR 178
              IR++ R++DL  +   +   + R  I+ ++R  +   +F+E  TP++ A      A+
Sbjct: 151 DVEIRYRQRYVDLIVNEPVREAFRKRATIVQTVRRFLSERDFLEVETPMMQAVPGGATAK 210

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F           + L  AP+ Y + L+  GF+R F++   FR+E   +   P EF  L+
Sbjct: 211 PFKTFHNALNMELF-LRIAPELYLKRLLVGGFERVFELNRNFRNEGVSTQHNP-EFTMLE 268

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
              ++   +D++   E +   + +  +     V+   + I      RRY      +    
Sbjct: 269 FYQAYATYEDLMQLTEELFGVLCDAVNGGSRLVTYQDMTIDLKPPWRRYRLLDSLVEVGE 328

Query: 298 IMHNVTEHFVHS 309
           +     EH  H+
Sbjct: 329 VPREALEHPEHT 340



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + ++       +++L   G E+A+     +      + F
Sbjct: 370 EPKLIQPTFISHYPLEVSPLSRRSESDPAVTDRFELFIAGREMANAFSELNDPRDQRERF 429

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                +++  +           RA + GMPP  G   GIDR+VML   + ++R+V LFP
Sbjct: 430 LLQLQARQEGDEEAHFMDEDYIRALEYGMPPAAGEGIGIDRVVMLFTDSPSIRDVILFP 488


>gi|329896806|ref|ZP_08271722.1| Lysyl-tRNA synthetase (class II) [gamma proteobacterium IMCC3088]
 gi|328921561|gb|EGG28941.1| Lysyl-tRNA synthetase (class II) [gamma proteobacterium IMCC3088]
          Length = 494

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 61/294 (20%), Positives = 117/294 (39%), Gaps = 25/294 (8%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RT   GDL                    + G + R R      FL I++  G  Q+  N 
Sbjct: 37  RTAYAGDLQTRFGSESKEALEQADQQFAVVGRLIRNRG----AFLLIQEESGQIQLYINR 92

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    +++  +  I       +A+        G + ++ ++  +L+ +   PLP 
Sbjct: 93  QALSEETLAQIKTWDLGDI------VAAKGPLHKSGKGDLYINMEEARLLTKSLR-PLPD 145

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R++DL  +  +      R++I+  +R  M A  F+E  TP++    
Sbjct: 146 KYHGLADQELRYRQRYVDLIVNDDVRARFKLRSKIVAYIRDFMEARGFMEVETPMMQVIP 205

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+          Y L  AP+ Y + L   GF+R F+I   FR+E   +   P 
Sbjct: 206 GGATAKPFVTHHNALDLDMY-LRIAPELYLKRLTVGGFERVFEINRNFRNEGLSTRHNP- 263

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           EF  L+   ++ +  D +   E +L+G+  +     T+      + +     R+
Sbjct: 264 EFTMLEYYWAYADYRDAMLLTEQMLQGLVGDVLGATTIDYQGHTLDFSGEFDRF 317



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E ++         P       + +D       +++    G E+A+G    + +E   + F
Sbjct: 371 EHRLIQPTFITAYPTEVSPLARRSDSDPFVTDRFEFFVAGRELANGFSELNDAEDQAERF 430

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 K+  +           RA + GMPP  G   GIDR+VMLL  + ++R+V LFP 
Sbjct: 431 KAQVAEKDAGDEEAMHFDADYIRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVLLFPH 490

Query: 565 SQ 566
            +
Sbjct: 491 MR 492


>gi|257215914|emb|CAX83109.1| lysyl-tRNA synthetase [Schistosoma japonicum]
          Length = 388

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 58/248 (23%), Positives = 109/248 (43%), Gaps = 8/248 (3%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V +SG VH  R  G  +IF DIR      QV+AN      E      +E +    G ++ 
Sbjct: 110 VSISGRVHAKRSAGSKLIFYDIRSEDCRLQVMANIRHYKSEAEFHAINEVIHL--GDIIG 167

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTL 138
            +     + +  G++ +   +I +LS      LP        +  RF+ R+LDL   + +
Sbjct: 168 CAGSPGKSKL--GELSIIPHEITLLSPCL-YQLPHMHYGVKDKETRFRQRYLDLLMNEEV 224

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
            +  + R RI+N +R  +    F+E  TP++   +   A    +           +  AP
Sbjct: 225 RRRFITRARIVNYVRKFLDDLGFLEVETPMMNTIAGGAAAKPFITYHNELNMNLYMRVAP 284

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G +R +++   FR+E       P EF   +  M++ + +D++   E++L 
Sbjct: 285 ELYLKMLVIGGLNRVYELGRVFRNEGIDLTHNP-EFTSCEFYMAYADYEDLMTITEDLLS 343

Query: 259 GVFEEFSN 266
           G+ +    
Sbjct: 344 GLVKHLFG 351


>gi|586059|sp|P37879|SYK_CRIGR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|469122|emb|CAA83505.1| Lysyl tRNA Synthetase [Cricetulus longicaudatus]
          Length = 597

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 60/287 (20%), Positives = 115/287 (40%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 127 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFVRINNKLRRGDIIGV 184

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +   +I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 185 QGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 241

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R +II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 242 QKFIVRAKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 300

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E +L 
Sbjct: 301 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMLS 359

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          +I Y          + D   P    ++ E 
Sbjct: 360 GMVKSITGSY-------KITYHPDGPEGEAYEIDFTPPFRRISMVEE 399



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 479 KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 538

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 539 YGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFPAMK 574


>gi|315651995|ref|ZP_07904997.1| asparagine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485824|gb|EFU76204.1| asparagine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 463

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/373 (17%), Positives = 119/373 (31%), Gaps = 47/373 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
               +GS + + GWV   R      FL I D     Q+    +    +  K  +      
Sbjct: 13  SKKYIGSEITIGGWVRSNRDSKSFGFLVISDGSYFEQMQVVYNDTLPDFNKLTKINV--- 69

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +      I         E+ A  I+I   +     P+  +R   E +R     L 
Sbjct: 70  --GAALIVKGTLIATPDAKQPFEIQAAHIDIEGES-TPDYPLQKKRHTLEYLR-TITHLR 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ---- 188
            R +T       R+ I  ++       +F+   TPI+T S  EGA +    + +      
Sbjct: 126 PRTNTFQAVFRVRSLIAYAIHKFFQERDFVYVHTPIITGSDAEGAGEMFRVTTLEPRDPV 185

Query: 189 ----------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A  F   +   P FR E+  + R   EF+
Sbjct: 186 LNKDGSVDFSKDFFGKETNLTVSGQLNGETFAMAFRNIYTFGPTFRAENSNTTRHAAEFW 245

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E +F + +D ++  E++L+ +                            +  ++ F
Sbjct: 246 MIEPEFAFGDLNDNMDLAESMLKYIINYVLENAAPEMEFFNQFVDKGLLERLHHVANSEF 305

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            R+ Y +AI     +  +    +       TEH      +VF K + V    +       
Sbjct: 306 GRVTYTEAIDILEKNNDNFEYKVSWGCDLQTEHERFLTEQVFKKPIFVTDYPKEIKAFYM 365

Query: 333 GGGGNRAFCDRMN 345
               ++     M+
Sbjct: 366 KENDDKKTVAAMD 378



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 52/150 (34%), Gaps = 24/150 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +  ++ D+P     +E K        F M        K ND     A  
Sbjct: 338 HERFLTEQVFKKPIFVTDYP-----KEIK-------AFYM--------KENDDKKTVAAM 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R      +L+    +G+        +       + G   H G   
Sbjct: 378 DCLVPGIGEIIGGSQREDDYNKLLKRIEELGMK----SEDYDFYLDLRKYGSTRHAGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R VM L G  N+R+V  FP +   C+L
Sbjct: 434 GFERCVMYLTGMSNIRDVLPFPRTVGNCEL 463


>gi|297588296|ref|ZP_06946939.1| asparagine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297573669|gb|EFH92390.1| asparagine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 461

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 122/348 (35%), Gaps = 51/348 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75
              V + GW+   R    + F+++ D      V      D+  FE ++ ++    + + G
Sbjct: 16  DKEVEVGGWIKNSRFSKNVGFIELNDGTFFNPVQIVVGKDNEDFEKSEKLKLSSAIIVVG 75

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++       N+       E+ A K+ +   +     P+  +R   E +R     L  R 
Sbjct: 76  KLVLTP----NSKQP---FEIQASKVIVEGES-TDDYPLQKKRHTFEFLR-TILHLRPRT 126

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           +T +     R+R+  ++        F+   TPI+T S  EGA +    + ++        
Sbjct: 127 NTFNAVFRVRSRLAFAIHKFFNERGFVYVHTPIITGSDAEGAGEMFRVTTLDLDNIPKDD 186

Query: 190 --------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F++         Q +    A  F   +   P FR E   + R   EF+ ++
Sbjct: 187 DGNVDFSQDFFSKSTNLTVSGQLQAEAYALAFRNVYTFGPTFRSEHSNTPRHAAEFWMME 246

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRI 277
            E+ F + DD+ N  E+++R + ++                              +F ++
Sbjct: 247 PEICFADLDDVCNLAEDMVRYIIKDVMENCEEEIKFFNSFVDKNLIERLTKVANKSFKKL 306

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
            Y +A+            P+   M   TEH  +   +V    + V   
Sbjct: 307 TYTEAVEILQKSGEKFEYPVEWGMDLQTEHEKYLSEKVVDGPVFVTDY 354



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 72/212 (33%), Gaps = 27/212 (12%)

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-- 415
           YI   + E+        +    + V+   I     + +         + ++    + +  
Sbjct: 267 YIIKDVMENCEEE----IKFFNSFVDKNLIERLTKVANKSFKKLTYTEAVEILQKSGEKF 322

Query: 416 -ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
                   +L       +    ++D P +  +            F M          +D 
Sbjct: 323 EYPVEWGMDL-QTEHEKYLSEKVVDGPVFVTD-----YPKEIKAFYMR-------LNDDN 369

Query: 475 LSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
            ++ A   DL+  G  E+  G  R    E++ +    +G +KE  +          + G 
Sbjct: 370 KTVAAT--DLLVPGIGELIGGSQREERYELLDKKMDELGFNKEEYK----WYLDLRKYGG 423

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             HGG   G +R+VM + G  N+R+V  FP +
Sbjct: 424 VKHGGFGLGFERMVMYMTGMSNIRDVIPFPRT 455


>gi|91793313|ref|YP_562964.1| asparaginyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123166104|sp|Q12MT5|SYN_SHEDO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|91715315|gb|ABE55241.1| asparaginyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 466

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/388 (17%), Positives = 120/388 (30%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYG---ITQVVANPDSACFEIAKSVRSEWVLC 72
           VGS V + GWV   R    GI FL + D      I  V+ N      +    + +   L 
Sbjct: 16  VGSQVTVRGWVRTRRDSKAGISFLALYDGSCFDPIQGVIPNNLPNYDDEVLKLTAGCSLV 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+                EL    +E+    ++        + +      +   L 
Sbjct: 76  MTGDVVESPGAGQA-------FELQVTAVEVTGWVDDPDTYPMAAKRHSIEHLRELAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--- 189
            R + +      R  +  ++      + FI  STP++TAS  EGA +    S ++     
Sbjct: 129 PRTNIIGAVARVRNCLSQAIHRFYHEQGFIWVSTPLITASDCEGAGEMFRVSTLDMENLP 188

Query: 190 -----------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 189 RTDAGKVDYDKDFFGKESFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTTRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NNF 274
            ++ E++F   DD     E++L+  F    N                          ++F
Sbjct: 249 MVEPEVAFATLDDAAKLAEDMLKYAFNAVLNERMDDLSFFNERVDKTVIERLQAFVSSDF 308

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            ++ Y DA+             +   +   +EH  +     F   + V    +       
Sbjct: 309 AQVDYTDAVEILKNCGKKFEFAVEWGIDLQSEHERYLAEEHFKAPVVVKNYPKDI----- 363

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 364 KAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 72/229 (31%), Gaps = 30/229 (13%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR-- 417
           FW ++     A +   AK    +   A    L+ +  D  FF                  
Sbjct: 247 FWMVEPEVAFATLDDAAKLAEDMLKYAFNAVLNERMDDLSFFNERVDKTVIERLQAFVSS 306

Query: 418 ----------NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME 467
                       I +  G      F   W +D      +E E+ +   H    +      
Sbjct: 307 DFAQVDYTDAVEILKNCG--KKFEFAVEWGIDL----QSEHERYLAEEHFKAPVVVKNYP 360

Query: 468 S------LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
                  ++ ND     A   D++  G  EI  G  R    +V+    + + +S    + 
Sbjct: 361 KDIKAFYMRLNDDGKTVA-AMDVLAPGIGEIIGGAQREERLDVLDARLAEMELS----QE 415

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +       + G  PH G   G +R+V  + G  N+R+V  FP +    
Sbjct: 416 DYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVNNIRDVIPFPRAPRSA 464


>gi|326430801|gb|EGD76371.1| lysyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 796

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 52/257 (20%), Positives = 106/257 (41%), Gaps = 8/257 (3%)

Query: 19  SFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
             V ++G +   R  G  ++F DI       QV+A       +      +   L   G V
Sbjct: 107 ETVSVAGRIQLKRASGKRLVFYDIHGEGTKLQVMAEISRH--DATPDFETIHGLLRRGDV 164

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +             G++ +  +++++L+      LP        +  R++ R+LDL  + 
Sbjct: 165 IGIVG--FPTRTKRGELSIVPKEVQLLAPCL-HMLPHQHFGITNKETRYRQRYLDLITNR 221

Query: 138 -LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +  N V R  II+ +R  +    F+E  TP++   +        +    +      L  
Sbjct: 222 SVRNNFVVRANIISYVRRFLDMNGFLEVETPMMNMVAGGATAKPFITHHNDLNLDLFLRV 281

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y ++L+  GFDR +++   FR+E       P EF   +  M++ + +D++   E +
Sbjct: 282 APELYLKMLVVGGFDRVYELGRQFRNEQIDMTHNP-EFTSCEFYMAYADFNDLMVMTEEL 340

Query: 257 LRGVFEEFSNGNTVSNN 273
           + G+ +       V+ +
Sbjct: 341 IAGMVKSIKGTYKVTYH 357



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 4/114 (3%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQC 531
                +++L  +  E+ +     +  +V  + F      K    +  +       +A + 
Sbjct: 463 PGLTERFELFVSTKEVCNAYTELNDPQVQRERFEQQAKDKAMGDDEAQAIDEAFVKALEH 522

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLR 585
           G+PP  G   GIDR+ M L  + N++EV LFP  +        + ++V  +Q  
Sbjct: 523 GLPPTAGWGMGIDRMTMFLTDSNNIKEVLLFPAMKPEDVEKADALASVVDKQKD 576


>gi|62897229|dbj|BAD96555.1| asparaginyl-tRNA synthetase variant [Homo sapiens]
          Length = 548

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/344 (20%), Positives = 126/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V   +         + +E  + + G+
Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGM 184

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 185 LNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 240

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ +    R       + E + P L  +  EG           + +F  L Q
Sbjct: 241 NMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFGEEAF--LTQ 298

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  DD+LN +E++
Sbjct: 299 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLEDL 357

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 358 VCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRVNYSDAIVWLKEHDVKKEDG-TFYEFG 416

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 417 EDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDSRLTE 460



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +S     +         L+ N  EI  G +R   SE +L  +  
Sbjct: 439 RFPVEIKSFYMQRCPEDSRLTESVDV-------LMPNVGEIVGGSMRIFDSEEILAGYKR 491

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 492 EGIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCT 547

Query: 571 L 571
            
Sbjct: 548 P 548


>gi|317473689|ref|ZP_07932976.1| asparaginyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316898810|gb|EFV20837.1| asparaginyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 461

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/345 (18%), Positives = 120/345 (34%), Gaps = 49/345 (14%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             + L GWV   R      FL I D       Q+V   + + F   K +     + + G+
Sbjct: 19  KELSLCGWVRSNRDSRDFGFLVINDGTFFEPIQIVYGKELSNFTEVKKLSVGTAVIVKGI 78

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +                 E+ A+ +E+   +     P+  +R   E +R     L  R +
Sbjct: 79  LTETPD-------ARQPFEIQAESVEVEGES-PSDYPLQKKRHSFEYLR-TIAHLRPRAN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--------- 187
           T       R+ I  ++    +  +F+   TPI++    EGA +    + ++         
Sbjct: 130 TFQAVYRVRSLIAYAIHKFFMERDFVYVHTPIISGQDCEGAGEMFQVTTLDLEELSQGKK 189

Query: 188 ---QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
              +  F+    +     Q      A  F   +   P FR E+  + R   EF+ ++ EM
Sbjct: 190 LDYREDFFERETSLTVSGQLNGEAFAQAFRNIYTFGPTFRAEESNTTRHAAEFWMIEPEM 249

Query: 242 SFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRICYD 280
           +F + +D +   E++++ + +                          +   + F RI Y 
Sbjct: 250 AFADLEDNMLLAEHMIKYIIQYVLEQAPEEMGFFNEFVDKGLLDRLHHVAESEFARITYT 309

Query: 281 DAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
           +AI          + P+       TEH  +   +VF K + V   
Sbjct: 310 EAIDILKEHNNKFQYPVSWGTDLQTEHERYLTEKVFKKPVFVTDY 354



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 53/150 (35%), Gaps = 26/150 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +  ++ D+P     +E K      NP              D  ++ A  
Sbjct: 336 HERYLTEKVFKKPVFVTDYP-----KEIKAFYMKQNP--------------DGKTVAAV- 375

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  EI  G  R    E +      + ++       +       + G   H G  
Sbjct: 376 -DLLVPGIGEIIGGSQREDDLEKLQMRMGELEMNLSD----YDFYLDLRKYGSTRHSGFG 430

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R+VM + G  N+R+V  FP +   C+
Sbjct: 431 LGFERMVMYVTGMANIRDVIPFPRTAGKCE 460


>gi|156387606|ref|XP_001634294.1| predicted protein [Nematostella vectensis]
 gi|156221375|gb|EDO42231.1| predicted protein [Nematostella vectensis]
          Length = 506

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 61/265 (23%), Positives = 113/265 (42%), Gaps = 18/265 (6%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPD---SACFEIAKSVRS 67
           L    VG  V +   +H  R  G   F+ +RD  Y +  + A  D       + A  +  
Sbjct: 60  LTEDMVGKRVLVRARIHTSRATGKQCFMTLRDRQYTVQALCAASDVVSKHMVKFAAGINR 119

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--------- 118
           E ++ ++G V + + +  + +     +E+   K+ ++S++E        +          
Sbjct: 120 ESIIDVEGEVKAAAQKIKSCS--QQDVEILVDKLFVISLSEPRLPLQIEDASRPETDELA 177

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              +  R   R +DLR             +    R  + ++ F E  TP + +++ EG  
Sbjct: 178 HVNQDTRLDNRIIDLRTVPNQAIFSIEAGVCKLFREFLDSKGFHEIHTPKIISAASEGGA 237

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +    S     +F A  Q+PQ YKQ+ +   FD+ + I   FR ED  + R   EF  LD
Sbjct: 238 NVFEVSYFKGKAFLA--QSPQLYKQMALTGDFDKVYTIGSVFRAEDSNTHRHLTEFIGLD 295

Query: 239 MEMSFVEQ-DDILNTMENVLRGVFE 262
           +EMSF E   +++ T+ ++   +F+
Sbjct: 296 VEMSFYEHYHEVVRTIGDMFNYIFK 320



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF                   +  YD+   G E+ SG  R H  E + +  S+
Sbjct: 398 KYPLCIRPFYTMPD--------PFNPNVSNSYDMFIRGEEVLSGAQRIHDPEKLKERASH 449

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI  E +++       +F+ G PPH G   G+ R+VML L   NVR+ S+FP       
Sbjct: 450 HGIDLETIKS----YIDSFRYGAPPHAGGGIGLARVVMLYLDLHNVRKSSMFPRDPKRIT 505

Query: 571 L 571
            
Sbjct: 506 P 506


>gi|260889462|ref|ZP_05900725.1| asparagine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260860873|gb|EEX75373.1| asparagine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 462

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 133/376 (35%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWV 70
               +G  + ++GWV ++R      F+++ D   +   QVV + +   FE    +     
Sbjct: 12  TKEYLGKEIEINGWVKKIRSQKNFGFIELNDGTFFTGIQVVFDEELENFEEISKLTISSS 71

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G+V+    +           E+ A KI +   A+    P+  +R   E +R     
Sbjct: 72  IKVTGIVVESLGKG-------QDYEIKATKISVYQKADSDY-PLQNKRHSFEFLR-TIAH 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--- 187
           L  R +        R+ +  ++      +NF+   TPI+T S  EGA +    + ++   
Sbjct: 123 LRPRTNAFFATFRVRSILSYAIHKFFQEKNFVYVQTPIITGSDAEGAGEMFRLTTLDINN 182

Query: 188 -----------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                      +  F+   A      Q      A+ F   +   P FR E   + +   E
Sbjct: 183 VPKTENGSIDFKQDFFGKEANLTVSGQLNVETFATAFKNTYTFGPTFRAEKSNTPKHAAE 242

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F + D  ++ +E +++ +             F                   
Sbjct: 243 FWMMEPEIAFADLDVNMDVIEEMIKYIVNYVRENAKEEMEFFNQFVDKDLFNRLDTLVNN 302

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              RI Y +AI      K      +   +   TEH  +   + F K + V    +     
Sbjct: 303 EFGRITYTEAIEILKNSKQKFEYEVEWGIDLQTEHERYLAEKHFKKPVFVTDYPKDI--- 359

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  ++NE
Sbjct: 360 -------KAFYMKLNE 368



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 56/147 (38%), Gaps = 26/147 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P        K I      F M           D  +++A  
Sbjct: 337 HERYLAEKHFKKPVFVTDYP--------KDIKA----FYMK-------LNEDGKTVRAV- 376

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  EI  G  R    +V+L     +G+     E  +       + G  PH G  
Sbjct: 377 -DLLAPGIGEIVGGSQREDDYDVLLGKIHEMGLK----EEDYWWYLDLRKYGSVPHSGFG 431

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G DR++M + G  N+R+V  FP +  
Sbjct: 432 LGFDRMLMYITGMTNIRDVIPFPRTTK 458


>gi|120406308|ref|YP_956137.1| lysyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119959126|gb|ABM16131.1| lysyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 509

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 20/270 (7%)

Query: 5   RTHSCGDLGVS--------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD 55
           RTH+  +L  +          G  V ++G V   R  G + F  +++  G   Q + + D
Sbjct: 46  RTHTLAELRAAYPDLPADTKTGQEVGVAGRVIFARNSGKLCFATLQEGDGTHLQAMISLD 105

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               +   S+ +       G ++    E I++    G++ + A   +I S A        
Sbjct: 106 QVGQD---SLDAWKADVDLGDIVFVHGEVISSR--RGELSVLADSWQIASKALRPLP--V 158

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL  R        +R  ++ ++R  +    F+E  TP+L   + 
Sbjct: 159 AHKEMSEESRVRQRYVDLIVRPEARAIARQRVAVVRAVRNALERRGFLEVETPMLQTLAG 218

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  GFDR F++   FR+E   S   P E
Sbjct: 219 GAAARPFVTHSNALDADLY-LRIAPELFLKRCVVGGFDRVFELNRNFRNEGADSTHSP-E 276

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++   DD       +++ V +E
Sbjct: 277 FAMLETYQAYGTYDDSALVTRQLIQEVADE 306



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 50/139 (35%), Gaps = 26/139 (18%)

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              +   ++ DFP                P T P   +E             ++DL    
Sbjct: 386 DKLWAPTFVRDFP------------VETTPLTRPHRSIE---------GVTEKWDLYIRN 424

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGID 544
           FE+A+G        +  + F     +    ++           A + GMPP  G   GID
Sbjct: 425 FELATGYSELVDPIIQRERFEEQARAAAAGDDEAMALDEDFLAALEYGMPPTTGTGMGID 484

Query: 545 RIVMLLLGAKNVREVSLFP 563
           R++M L G  ++RE  LFP
Sbjct: 485 RLLMALTGL-SIRETVLFP 502


>gi|168033030|ref|XP_001769020.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679775|gb|EDQ66218.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 619

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/334 (17%), Positives = 119/334 (35%), Gaps = 47/334 (14%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
                ++G V   R  G  ++F D+       QV+A  + +        +    +    +
Sbjct: 120 DQSFSVAGRVMSKRASGGKLMFYDLHADGMKIQVIAQLNYSSLSEEDFGKLHASIKRGDI 179

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER------------------ 118
           V              G++ +  + IE+LS    +    +G+                   
Sbjct: 180 V---GINGFPGKSKKGELSIFVRSIELLSYCLHMLPKTYGKGGKDQEDSKVPDHWHPGLS 236

Query: 119 -------EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT 170
                     +  R++ R+LDL  ++  +N+ K R+++I  +R  +   +F+E  TP++ 
Sbjct: 237 RNLDRYVLKDQETRYRQRYLDLMLNSDIRNVFKTRSQVIRFVRRFLDERDFVEVETPMMN 296

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
             +   A         +      +  AP+ Y + L+  G DR ++I   FR+E       
Sbjct: 297 MIAGGAAAKPFKTHHNDLNMDLFMRIAPELYLKELIVGGLDRVYEIGKQFRNEGIDLTHN 356

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN----------------F 274
           P EF   +   ++ + DD++   E +L G+ +E +    +  +                F
Sbjct: 357 P-EFTACEFYWAYADYDDLMKVTEEMLSGMVKEITGSYKIQYHSNGLDQPAIEIDFTPPF 415

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
            RI     +  +   K  L   + +    E   +
Sbjct: 416 RRIDMIKGLEEFSEGKIKLPKSLELLEAPEVNQY 449


>gi|71895483|ref|NP_001025754.1| lysyl-tRNA synthetase [Gallus gallus]
 gi|53130732|emb|CAG31695.1| hypothetical protein RCJMB04_9m1 [Gallus gallus]
          Length = 590

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/333 (20%), Positives = 125/333 (37%), Gaps = 39/333 (11%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCI 73
            V ++G +H  R  G  +IF D+R      QV+AN      +   F I   +R   ++ +
Sbjct: 122 TVSVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRLYKSEEEYFRINNKLRRGDIIGV 181

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G                G++ +   +I +LS      LP        +  R++ R+LDL
Sbjct: 182 VG---------NPGKTKKGELSIIPYEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDL 231

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSF 191
              D + +  + R +I+  +R  +    F+E  TP++        A+ F+          
Sbjct: 232 ILNDYVRQKFITRAKIVTYIRSFLDELGFLEIETPMMNIIPGGAMAKPFITYHNELDMKL 291

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++ 
Sbjct: 292 Y-MRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYRDLME 349

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             E +L G+ +  +          +I Y    +     + D   P    ++ +    +  
Sbjct: 350 ITEKLLSGMVKHITGSY-------KITYHPDGQDGQAYEIDFTPPFRRISMVDELEKTLG 402

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
             F    S                  R F D +
Sbjct: 403 VKFPSTESFE------------TEETRRFFDDL 423



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 4/95 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQC 531
                +++L     E+ +     +      Q F +   +K   ++           A + 
Sbjct: 477 RGLTERFELFVMKKEVCNAYTELNDPFQQRQLFEDQAKAKAAGDDEAMFIDENFCTALEY 536

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP  G   GIDR  M L  + N++EV LFP  +
Sbjct: 537 GLPPTAGWGMGIDRFTMFLTDSSNIKEVLLFPAMK 571


>gi|39996258|ref|NP_952209.1| asparaginyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|59798572|sp|Q74E08|SYN_GEOSL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|39983138|gb|AAR34532.1| asparaginyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298505271|gb|ADI83994.1| asparaginyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 461

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 73/350 (20%), Positives = 124/350 (35%), Gaps = 50/350 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEW 69
           L  +  G+ V + GWV   R   G+ FL + D   +   QVVA P  A +   + + +  
Sbjct: 11  LAGTPAGTEVIVKGWVRTSRVGKGVAFLAVNDGSCLASLQVVAEPGLANYHELRGIGTGA 70

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G+V    A           +EL A K+ ++  A+E   P+  +R   E +R    
Sbjct: 71  AVAVRGIVAESPAAGQA-------VELHATKVVVVGGADEQY-PLQKKRHTFEYLR-TIA 121

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ- 188
            L  R +T       R+ +  ++        F+   TPI+T S  EGA +    + ++  
Sbjct: 122 HLRPRSNTFGAVFRVRSSLAQAVHRFFAERGFLYVHTPIITTSDCEGAGELFRVTTLDPS 181

Query: 189 ------------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+A         Q +  L A  F   +   P FR E+  + R   E
Sbjct: 182 APPMADGAVDFSQDFFAAQAGLTVSGQLEGELFAQAFSDIYTFGPTFRAENSNTPRHAAE 241

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD------------- 280
           F+ ++ EM+F +  D     E+  R +     +       F     D             
Sbjct: 242 FWMIEPEMAFADLRDDAALAEDFFRYLCRHVLDNCAEDMAFFNEHVDRGLLARVEQVAGS 301

Query: 281 -DAIRRYGTDKPD-------LRNPII--MHNVTEHFVHSEFRVFSKILSV 320
             A+  YG               P+   +   TEH  +   +V    + V
Sbjct: 302 SFAMMEYGVAIEHLKRAAVPFEYPVEWGLDLQTEHERYLTEQVVGGPVFV 351



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 48/135 (35%), Gaps = 26/135 (19%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQYDLVCNGFEIA 492
             +++++P                 F M +     ++   DL         LV    EI 
Sbjct: 348 PVFVVNYP------------QEIKAFYMRRNDDGRTVAAMDL---------LVPKVGEII 386

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +++       GI+             + + G  PH G   G +R++M L G
Sbjct: 387 GGSQREERYDLLESRMREGGIAP----ESLWWYLDSRRWGSTPHAGFGLGFERLIMYLTG 442

Query: 553 AKNVREVSLFPMSQN 567
            +N+R+V  FP +  
Sbjct: 443 MENIRDVIPFPRTPR 457


>gi|331083267|ref|ZP_08332380.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330404348|gb|EGG83893.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 463

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 52/281 (18%), Positives = 97/281 (34%), Gaps = 28/281 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWV 70
               +   V + GWV  VR      F+ + D      +    +     F+    +     
Sbjct: 13  REEYLDKEVTVGGWVRSVRDSKTFGFIVLHDGSFFETLQIVYHDTMENFQTISKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A +I +   +     P+  +R   E +R     
Sbjct: 73  IVVKGTLVATPQ-------AKQPFEIQATEIMVEGDS-AADYPLQKKRHSMEYLR-TISH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ I  ++      + F+   TP++T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFKVRSLIAYAIHQFFQEQGFVYVHTPLITGSDCEGAGEMFQVTTMDLND 183

Query: 190 -------------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+  P       Q      A  F   +   P FR E+  + R   E
Sbjct: 184 IPKTEEGKVDFSQDFFKKPTNLTVSGQLNGETFAQAFRNIYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           F+ ++ EM+F + DD +   E++L+ V            NF
Sbjct: 244 FWMIEPEMAFSDLDDNMALAESMLKYVIRYVLENAPEEMNF 284



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 51/139 (36%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K        F M Q               A    LV    EI 
Sbjct: 349 RPVFVTDYP-----KEIK-------AFYMKQNED--------GKTVAAMDCLVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    E + Q    + ++    E  +G      + G   H G   G +R VM L G
Sbjct: 389 GGSQREDSYEKLSQRMKEMNLN----EEDYGFYLDLRKYGSTRHSGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
            +N+R+V  FP + N C+L
Sbjct: 445 MQNIRDVIPFPRTVNNCEL 463


>gi|325473432|gb|EGC76627.1| asparaginyl-tRNA synthetase [Treponema denticola F0402]
          Length = 473

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 78/470 (16%), Positives = 144/470 (30%), Gaps = 66/470 (14%)

Query: 7   HSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           H   D L     G  + + GWV   R    ++F++I D      V A  D     +  + 
Sbjct: 3   HLIKDILTSEPKGQAIDVYGWVRTKRETKNLVFIEINDGSCFASVQATFDRDT-GLDNNT 61

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +       G+ +  S   I +     ++EL A  I I   A++   P+  +R   E +R
Sbjct: 62  EALLKKAGTGVSVKVSGNLIPSPAAGQRVELQANNIHIFGDADQEKYPLQKKRHSMEFLR 121

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
                L  R +T       R+++  ++        F    TPI+T S  EGA +    + 
Sbjct: 122 -DIAHLRARTNTFGAVARIRSQMAYAIHTFFQERGFQYVHTPIITGSDCEGAGEMFHVTT 180

Query: 186 VNQG----------------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCF 220
            +                         F+   A      Q +    A+   R +   P F
Sbjct: 181 FDIEETVKKALKEKKDPDSFKIDYSQDFFGKQANLTVSGQLEGETYATALSRIYTFGPTF 240

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS--------- 271
           R E+  + R   EF+ ++ EMSF    + +   E  +  + +                  
Sbjct: 241 RAENSNTSRHLAEFWMVEPEMSFFTIKENMELAEEFIVYLLKWALEKCREDLEFFDSRIK 300

Query: 272 ------------NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
                         F R+ Y +AI                    + +   + +   +   
Sbjct: 301 KGLIEMLKNVVNTPFTRLTYTEAIAELEKHIDRFEF--------KPYWGCDLQSEHERFL 352

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ-----PGLAYIFWRLDESGNVAGMGP 374
               Y+   I        ++F  ++NE  ++        PGL  I    +   N+  +  
Sbjct: 353 TEEVYKGPVIVTNYPKEIKSFYMKLNEDGKTVRAMDVLVPGLGEIIGGSEREENLDILQG 412

Query: 375 VAKHLNIVNTEAIR----VRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             K L +   +        R                L + +   + R+ I
Sbjct: 413 RIKELGLREEDYWWYLDLRRYGTVPHSGFGLGFERLLLYVTGMGNIRDVI 462



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 56/151 (37%), Gaps = 8/151 (5%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL---KGNDLLS 476
           IA+    I+   F+  W  D          +++       T     ++S       D  +
Sbjct: 324 IAELEKHIDRFEFKPYWGCDLQSEHERFLTEEVYKGPVIVTNYPKEIKSFYMKLNEDGKT 383

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A    LV    EI  G  R    +++      +G+     E  +       + G  PH
Sbjct: 384 VRAMDV-LVPGLGEIIGGSEREENLDILQGRIKELGLR----EEDYWWYLDLRRYGTVPH 438

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R+++ + G  N+R+V  FP +  
Sbjct: 439 SGFGLGFERLLLYVTGMGNIRDVIPFPRAPK 469


>gi|242398977|ref|YP_002994401.1| Asparaginyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242265370|gb|ACS90052.1| Asparaginyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 431

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 78/350 (22%), Positives = 143/350 (40%), Gaps = 31/350 (8%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEIAKSV 65
            C D+     G  V+L+GWV+R R  G  +F+ +RD  GI Q +   D     +E AK V
Sbjct: 7   YCMDVKPKMEGERVKLAGWVYRKREVGNKVFIVLRDSSGIIQTIFMKDLSEDAYEKAKQV 66

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + I+G V S       +   TG +E+ A KIEIL   E  P+     ++  +   
Sbjct: 67  GIESSVIIEGTVKSD------SRAPTG-VEIQADKIEILQNVEFFPIT----KDASDEFL 115

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L L    +   +  +  ++ + R  ++ + + E   PIL   + EG         
Sbjct: 116 LDVRHLHLHSPKVGSVMKVKGTLMQAAREWLLQDGWYEVFPPILVTGAVEGGATLFKLKY 175

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            ++ ++  L Q+ Q Y +  +  G ++ + + P FR E  R+ R   E++ L++E ++++
Sbjct: 176 FDREAY--LSQSAQLYLEAAIF-GLEKVWSLTPSFRAEKSRTRRHLTEYWHLELEAAWMD 232

Query: 246 QDDILNTMENVLRGVF---------------EEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
             D+L   E ++  +                ++F+        F RI YD+AI    +  
Sbjct: 233 LWDLLEVEEELVSYMVQRTLELRKKEIEEFRKDFTTLKNSEPPFPRISYDEAIDILQSKG 292

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
             +     M    E  +  EF     +       + + +        +A 
Sbjct: 293 VKIEWGEDMGADEERILTQEFDRPFFVYGYPKHIKAFYMKEDPEDSRKAL 342



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 53/154 (34%), Gaps = 17/154 (11%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +    +++G          +  D PF+ +             F M +   +S K    
Sbjct: 292 GVKIEWGEDMGADEERILTQEF--DRPFFVY-----GYPKHIKAFYMKEDPEDSRKALAA 344

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
             +    Y       E+  G  R    E ++Q     G+  +  E          + G  
Sbjct: 345 DMLAPEGY------GEVIGGSQREDDYEKLVQRILEEGMDPKNYE----WYLDLRKYGSV 394

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PH G   G++R+V  +L   ++R  +LFP + + 
Sbjct: 395 PHSGFGLGLERLVAWVLKLNHIRWATLFPRTPSR 428


>gi|237737416|ref|ZP_04567897.1| asparaginyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421278|gb|EEO36325.1| asparaginyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 463

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/432 (16%), Positives = 142/432 (32%), Gaps = 68/432 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   V ++GWV ++R      F+++ D       QVV +   + FE    +     
Sbjct: 13  TEKYLDQEVIINGWVKKIRDQKNFGFIEVNDGSFFKGVQVVFDTRLSNFEEISRLSIISS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++                E+ A++I +   A+ L  P+  +R   E +R K   
Sbjct: 73  IEVKGKLVKSQGAGQA-------FEIMAEEINVFQKAD-LEYPLQNKRHTFEYLRTK-AH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++        F+   TPI+T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFSAVFRVRSVVAYAIHKFFQENGFVYVHTPIITGSDCEGAGEMFRVTTLDLNN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       S F   +   P FR E+  + R   E
Sbjct: 184 LPKKEDGTVDNSKDFFGKETNLTVSGQLSGETFCSAFRNIYTFGPTFRAENSNTARHASE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F + +  +   E++++ + +   +       F                   
Sbjct: 244 FWMIEPEIAFADLEANMELAESMVKYIIKFVMDECPEEMEFFNNFIEKGLFDKLNNVLNS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+   +   +EH  +     F K + +    +     
Sbjct: 304 DFGRLTYTEAIDILLKSGKKFDYPVEWGIDLQSEHERYLAEEYFKKPVFLTDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR 390
                  +   D     A     PG+  I            +G   +  ++   E     
Sbjct: 361 --KAFYMKLNPDGKTVRAMDLLAPGIGEI------------IGGSQREDSLEILENRITE 406

Query: 391 LDMQDGDSCFFI 402
           L M+  D  F++
Sbjct: 407 LGMKPEDYEFYL 418



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 54/136 (39%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P        K I      F M           D  +++A   DL+  G  EI
Sbjct: 349 KPVFLTDYP--------KDIKA----FYMK-------LNPDGKTVRAM--DLLAPGIGEI 387

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    E++    + +G+  E  E          + G  PH G   G +RI+M + 
Sbjct: 388 IGGSQREDSLEILENRITELGMKPEDYE----FYLDLRRFGSFPHSGYGLGFERIIMYIT 443

Query: 552 GAKNVREVSLFPMSQN 567
           G  N+R+V  FP + N
Sbjct: 444 GMTNIRDVIPFPRTPN 459


>gi|315186351|gb|EFU20112.1| asparaginyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 482

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 60/339 (17%), Positives = 108/339 (31%), Gaps = 39/339 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V + GWV  VR    + FL + D      +    D    E+A  + +       G  
Sbjct: 43  GQKVEVLGWVRSVRESKQVAFLHLSDGSTTAPLQVVVDKTREELASCLET----LRTGAS 98

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +        +      +E+ A+ + +L  A     P+  +R   E +R +   L  R +T
Sbjct: 99  VRVVGTLRPSPGTKQPVEIHAEALTVLGPA-PEDYPLQKKRHSFEFLR-EIAHLRPRTNT 156

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY----- 192
           +   +  R  +   +        F+   TPI+T    EGA      + +   + Y     
Sbjct: 157 IGAVMRVRNTLAWEIHRFFQERGFLYVHTPIITTGDAEGAGALFRVTTLPPDAPYDPTED 216

Query: 193 -----ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
                A      Q +    A  F   +   P FR E+  + R   EF+ ++ EM+F + +
Sbjct: 217 FFGAPAFLTVSGQLEAEAYALAFVNVYTFGPTFRAENSHTPRHLAEFWMVEPEMAFCDLE 276

Query: 248 DILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRICYDDAIRRY 286
             ++  E  +  + E     +                          F  + Y + I   
Sbjct: 277 GDMHLAEEFITHLLEAVLERHPEEMAFFEQWIAPGLTDQLEAVVNTPFTHMTYTEVIEHL 336

Query: 287 GTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
                    P    M   TEH  +    +    + V   
Sbjct: 337 KKAPASFTFPPEWGMDLQTEHERYLTEELVKGPVIVTDY 375



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 4/83 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    E +L     +G+  E  +          + G  PH G   G 
Sbjct: 399 LVPRLGEIIGGSQREDDYERLLARMQELGMRIEAYQ----WYLDLRRYGGAPHAGFGLGF 454

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR+V  + G +N+R+V  FP + 
Sbjct: 455 DRLVQYVTGMQNIRDVIPFPRTP 477


>gi|325955632|ref|YP_004239292.1| asparaginyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323438250|gb|ADX68714.1| Asparaginyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 482

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 59/296 (19%), Positives = 113/296 (38%), Gaps = 31/296 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC 58
           M  Y   +  + G       V + GWV   R +    F+ + D   +   QVV + D   
Sbjct: 1   MQSYSIKTLLEKGKEVALQEVSIHGWVRSFRSNR---FIALNDGSCLKTIQVVVDFDKFD 57

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFG 116
            E+ + + +   L + G V+    +         +IE+ A+ I++L VA  EE+   +  
Sbjct: 58  EELIQQITTAASLQVVGEVVESQGKG-------QEIEIVAKDIKVLGVAASEEVQGTILQ 110

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            + +      +   L  R +     +  R  ++ ++       +F+  +TPI+T S  EG
Sbjct: 111 PKAHSLEKLREQAHLRFRTNLFGAVMRVRNALMFAIHQYFNELDFVYINTPIITGSDAEG 170

Query: 177 ARDFLVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPC 219
           A +    +  +                 F+          Q +    A G  + +   P 
Sbjct: 171 AGEMFHVTNFDLDNLPRTEDGKVDYSQDFFGKATNLTVSGQLEGEAAAMGLGKIYTFGPT 230

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           FR E+  + R   EF+ ++ EM+F   D  ++  E+ L+ V +   +       FL
Sbjct: 231 FRAENSNTSRHLAEFWMIEPEMAFYNLDQNMDLAEDFLKYVIQYAKDKCPDDLAFL 286



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 21/127 (16%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHM 500
            +++ +E K        F M           D  +++A   D++  G  EI  G  R   
Sbjct: 372 LFDYPQEIK-------AFYMR-------LNEDGKTVRAM--DVLFPGIGEIIGGSQREER 415

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            +V+ +     GI +E +           + G  PH G   G++R+V+ + G  N+R+V 
Sbjct: 416 LDVLDERIKQFGIDQEEIW----WYRDTRRFGTVPHSGFGLGLERLVLFVTGMGNIRDVI 471

Query: 561 LFPMSQN 567
            FP + N
Sbjct: 472 PFPRTPN 478


>gi|300722558|ref|YP_003711848.1| asparagine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297629065|emb|CBJ89650.1| asparagine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 466

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 71/408 (17%), Positives = 133/408 (32%), Gaps = 49/408 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL + D      + A  ++        V    +    G
Sbjct: 16  VDSEVTVRGWIRTRRDSKAGISFLAVHDGSCFNPLQAVVNNNLPNYQDEV----LHLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  +   + +       EL A K+ ++ + ++        + +      +   L  R 
Sbjct: 72  CSVEITGTVVESQGTGQSFELQATKVVVVGMVDDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFHEKGFFWVSTPLITASDTEGAGEMFRVSTLDLQNLPRTD 191

Query: 189 -------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      A      +   P FR E+  + R   EF+ ++
Sbjct: 192 KGEVDFSQDFFGREAFLTVSGQLNGEAYACALSNVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + +DI    E++L+ VF+                            V ++F+++
Sbjct: 252 PEVAFADLNDIAKLSEDMLKYVFKAALEERADDLAFFAERVDKDVITRLEKFVDSDFIQL 311

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y DAI+          NP+      +     E  +  K        + +    K     
Sbjct: 312 DYTDAIKILENCGQKFENPVFWG--VDLSSEHERYLAEKHFEAPVIMKNYPKNIKAFYM- 368

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTE 385
           R   D     A     PG+  I   +  S     +  + K L  +   
Sbjct: 369 RMNEDGKTVAAMDVLAPGIGEI---IGGSQREERLDMLDKRLEEMGLN 413



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 77/231 (33%), Gaps = 38/231 (16%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FW ++     A +  +AK    +     +  L+ +  D  FF         +      + 
Sbjct: 247 FWMVEPEVAFADLNDIAKLSEDMLKYVFKAALEERADDLAFFAERVDKDVITRLEKFVDS 306

Query: 420 IAQELGIINC--------NCFE--FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
              +L   +           FE    W +D      + E ++     +           +
Sbjct: 307 DFIQLDYTDAIKILENCGQKFENPVFWGVD-----LSSEHERYLAEKHF------EAPVI 355

Query: 470 KGNDLLSIKAF------------QYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
             N   +IKAF              D++  G  EI  G  R    +++ +    +G++K 
Sbjct: 356 MKNYPKNIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDMLDKRLEEMGLNK- 414

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                +       + G  PH G   G +R+V  + G  NVR+V  FP +  
Sbjct: 415 ---EDYWWYRDLRRYGTVPHAGFGLGFERLVAYVTGVANVRDVIPFPRTPR 462


>gi|296471913|gb|DAA14028.1| asparaginyl-tRNA synthetase 2, mitochondrial [Bos taurus]
          Length = 414

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 116/266 (43%), Gaps = 19/266 (7%)

Query: 10  GDLGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           G LGV    G  V++ GW+  +R    ++FL + D   +  +    DS+    ++ +   
Sbjct: 32  GALGVQSANGERVKVQGWIRSIRSQKEVLFLHVNDGSSLESLQVVADSSF--DSRELAFG 89

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G ++   ++  N       +EL A+KIE++   +    P   +  +P     +Y
Sbjct: 90  SSVEVQGQLVKSPSKKQN-------VELKAEKIEVVGSCDAKAFPFKYKERHPLEYLRQY 142

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS---- 184
             L  R + L   +  R+    ++        F+   TP++T++  EGA +         
Sbjct: 143 PHLRCRTNVLGSVLRVRSEATAAIHSFFKDSGFVHIHTPVITSNDCEGAGELFQVEPSSK 202

Query: 185 -RVNQGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +V + +F+ +P       Q    +M+  F + F   P FR E+ +S R   EFY ++ E
Sbjct: 203 IKVPEENFFNIPVFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAE 262

Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFS 265
           +SF+E   D++  ME++ +       
Sbjct: 263 ISFLESLQDLMQVMESLFKTTAMTVL 288


>gi|325188444|emb|CCA22980.1| lysyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 669

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 62/298 (20%), Positives = 115/298 (38%), Gaps = 13/298 (4%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            + + ++G +H  R  G  ++F D+R      QV+++ +   +E  +S      L   G 
Sbjct: 133 DTSISVAGRLHSKRASGSKLLFYDLRGDGAKIQVMSSLE--MYESHESFYKIHHLLRRGD 190

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-R 135
           ++             G++ +  ++I ILS      LP        +  R++ R+LDL   
Sbjct: 191 IVGIQG--FPGKSKKGELSIFPRRITILSPCL-HMLPKAHYGLKLQDTRYRQRYLDLILN 247

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           D   K    R +IIN +R  +    F+E  TP++   +        V    +      + 
Sbjct: 248 DETRKVFEIRAKIINFIRHFLDTRRFLEVETPMMNMIAGGATAKPFVTYHNDLHMNLYMR 307

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G DR +++   FR+E       P EF   +  M++ + +D++   E 
Sbjct: 308 VAPELYLKQLVIGGLDRVYEVGRQFRNEGIDLTHNP-EFTSCEFYMAYADYNDLMTMTEE 366

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           +   + +E S         L I  D +      D       I M    E        +
Sbjct: 367 LFSSMVKEISGSYQ-----LTIHRDPSEDPISIDFTPPFRRIKMVTAVEEATGMAIPI 419



 Score = 80.9 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 6/125 (4%)

Query: 448 EEKKIDFAHNPFTMPQG--GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML 505
           E+ K ++    F M Q        K +   +    +++L   G EI +     +  +V  
Sbjct: 459 EDNKANWTQPFFIMDQPVYNSPLAKYHRETAGLTERFELFLAGAEICNAYTELNNPKVQR 518

Query: 506 QAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           + F           +  +        A + G+PP GG   GIDR+ M L    N++EV L
Sbjct: 519 ERFIEQTRQAADGDDEAQPHDEAFCTAMEYGLPPTGGWGCGIDRLAMFLSNKFNIKEVLL 578

Query: 562 FPMSQ 566
           FP  +
Sbjct: 579 FPAMK 583


>gi|239629035|ref|ZP_04672066.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519181|gb|EEQ59047.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 463

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 63/349 (18%), Positives = 114/349 (32%), Gaps = 51/349 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
           +   V + GWV  +R      F+ + D       QVV +   + F     +     + + 
Sbjct: 17  LDKEVSIGGWVRSLRDSKAFGFIVVSDGSYFETLQVVYHDSLSNFAEISKMNVGTAIIVK 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G +++               E+ A ++ +   A     P+  +R   E +R     L  R
Sbjct: 77  GTLVATPQ-------AKQPFEIQATEVTVEG-ASASDYPLQKKRHSFEYLR-TISHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +T       R+ I  ++       +F+   TP++T S  EGA +    + ++       
Sbjct: 128 TNTFQAVFRVRSLIAYAIHQYFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDLNNIPKT 187

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGKVDFSQDFFNKATNLTVSGQLNAETYAMAFRNVYTFGPTFRAENSNTARHAAEFWMI 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + EM+F + DD +   E +L+ +            NF                       
Sbjct: 248 EPEMAFADLDDDMRLAEGMLKYIIRFVLEHAPEEMNFFNQFVDKGLLERLNNVLNSEFGH 307

Query: 277 ICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
           I Y DA+        +    +       TEH  +   +VF K + V   
Sbjct: 308 ITYTDAVELLEKHNDEFDYKVSWGCDLQTEHERYLTEKVFKKPVFVTDY 356



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 54/150 (36%), Gaps = 24/150 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +  ++ D+P     +E K        F M           D  ++ A  
Sbjct: 338 HERYLTEKVFKKPVFVTDYP-----KEIK-------AFYMKM-------NPDNKTVAAVD 378

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    + ++     +G+ K      +       + G   H G   
Sbjct: 379 C-LVPGIGEIIGGSQREDNLDKLVARMDELGLRK----EDYDFYLDLRKYGSTRHAGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R VM L G  N+R+V  FP + N C+L
Sbjct: 434 GFERCVMYLTGMGNIRDVVPFPRTVNNCEL 463


>gi|114052923|ref|NP_001040037.1| asparaginyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|193806383|sp|Q2KJG3|SYNC_BOVIN RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|86823811|gb|AAI05359.1| Asparaginyl-tRNA synthetase [Bos taurus]
          Length = 559

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 68/344 (19%), Positives = 127/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  +++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + + G+
Sbjct: 136 GQRIKVFGWVHRLRRQGKNLMFLVLRDGTGFLQCVLSDDLCQCYNGVVLSTESSVAVYGV 195

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 196 LNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 251

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ I    R       + E + P L  +  EG           + ++  L Q
Sbjct: 252 NMSKILKARSVITRCFRDHFFDRGYHEITPPTLVQTQVEGGATLFKLDYFGEEAY--LTQ 309

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  +++LN +E++
Sbjct: 310 SSQLYLETCIP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFEELLNRLEDL 368

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 369 VCDVVDRVLKSPAGNIVRDLNPNFKPPKRPFKRMNYSDAIVWLKEHNIKKEDG-TFYEFG 427

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 428 EDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDPRLTE 471



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   +E +L  +   GI        +       + G  PHGG   G+
Sbjct: 476 LMPNVGEIVGGSMRIWDNEEILAGYKREGIDPTP----YYWYTDQRKYGTCPHGGYGLGL 531

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R +  +L   ++R+V L+P     C  
Sbjct: 532 ERFLTWILDRYHIRDVCLYPRFVQRCKP 559


>gi|213512082|ref|NP_001133698.1| syncoilin, intermediate filament protein [Salmo salar]
 gi|209154978|gb|ACI33721.1| Asparaginyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 559

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 68/340 (20%), Positives = 123/340 (36%), Gaps = 22/340 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++F+ +RD  G  Q V N        A  + +E  + + G 
Sbjct: 136 GERVKVFGWVHRMRKQGKNLLFIVLRDGTGFLQCVLNDKLCQCYNALVLSTESTVALYGT 195

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V              G  EL     E++ +A           E    ++   R + +R +
Sbjct: 196 VKQVPEG----KQAPGGHELHCDFWELVGLAPAGGADNLLNMESDVDVQLNNRHMMIRGE 251

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ +    R       + E + P L  +  EG       +   + +F  L Q
Sbjct: 252 NVSKILRIRSTVTQCFRDHFFNRGYYEITPPTLVQTQVEGGSTLFNLNYFGEEAF--LTQ 309

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  +D+L+ +E++
Sbjct: 310 SSQLYLETCIP-ALGDTFCIAQSYRAEQSRTRRHLSEYTHIEAECPFMTYEDLLSRLEDL 368

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                +       F RI Y DAI          ++    +   
Sbjct: 369 VCDVVDRVLKSPAASLLYQVNPDFKPPKRPFKRINYSDAIIWLKEHDIK-KDDGTYYEFG 427

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
           E    +  R+ +  +        +    K     R   DR
Sbjct: 428 EDIPEAPERLMTDAIGETILLCRFPAEIKSFYMQRCPEDR 467



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   +E +L+ +   GI        +       + G  PHGG   G+
Sbjct: 476 LMPNVGEIVGGSMRIWDAEELLEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 531

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  LL   ++R+V L+P 
Sbjct: 532 ERFLTWLLNRHHIRDVCLYPR 552


>gi|159478809|ref|XP_001697493.1| lysyl-trna synthetase, LysRS [Chlamydomonas reinhardtii]
 gi|158274372|gb|EDP00155.1| lysyl-trna synthetase, LysRS [Chlamydomonas reinhardtii]
          Length = 591

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 107/265 (40%), Gaps = 7/265 (2%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           + G       V ++G ++  R  G  ++F D++      Q++A+  ++  + A+      
Sbjct: 123 EAGQQLTDVTVSVAGRIYSKRSSGSKLVFYDLKGDGSKIQIMADARNSDLD-AEGYAQVH 181

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
             C  G ++    E        G++ +  +K  +LS       P        +  R++ R
Sbjct: 182 NECKRGDIVGV--EGFPGKSKKGELSIFPKKFAVLSPCL-HMPPSAHFGLKDQETRYRQR 238

Query: 130 FLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           +LDL  ++ +      R +II  +R  +    F+E  TP++       A    V    + 
Sbjct: 239 YLDLIANSDVRSIFFTRAKIIQFVRRFLDTRGFLEVETPMMNMIPGGAAARPFVTHHNDL 298

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
                +  AP+ + + L+  G +R ++I   FR+E       P EF   +   ++ +  D
Sbjct: 299 NMQLYMRIAPELFLKQLVIGGLERVYEIGRQFRNEGIDLTHNP-EFTTCEFYQAYADYKD 357

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNN 273
           +L+  E ++  +  E      ++ +
Sbjct: 358 LLDLTEQMISQMVYEIKGSYKIAYH 382



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 4/92 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMP 534
             +++L  N  E+ +     +      + F +   +K   ++           A + G+P
Sbjct: 489 TERFELFINKREVCNAYTELNDPLKQRELFGDQAKAKSQGDDEAMFVDEVFCTALEYGLP 548

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P GG   G+DR+ MLL    N++EV LFP  +
Sbjct: 549 PTGGWGLGVDRMTMLLTDTNNIKEVLLFPAMK 580


>gi|109122288|ref|XP_001085923.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic [Macaca
           mulatta]
          Length = 559

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 68/340 (20%), Positives = 123/340 (36%), Gaps = 23/340 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V   +         + +E  + + G+
Sbjct: 135 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGM 194

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 195 LNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 250

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ I    R       + E + P L  +  EG       +   + +F  L Q
Sbjct: 251 NMSKILKARSMITRCFRDHFFDRGYHEITPPSLVQTQVEGGATLFKLNYFGEEAF--LTQ 308

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  DD+LN +E++
Sbjct: 309 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLEDL 367

Query: 257 LRGVFEEFSNG--------------NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           +  V +                         F R+ Y DAI           +    +  
Sbjct: 368 VCDVVDRILKSPAGSIVYELNPVELQPPKRPFKRMNYSDAIIWLKEHDIKKEDG-TFYEF 426

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
            E    +  R+ +  ++       + +  K     R   D
Sbjct: 427 GEDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPED 466



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   +E +L  +   GI        +       + G  PHGG   G+
Sbjct: 476 LMPNVGEIVGGSMRTSDAEEILAGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 531

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R +  +L   ++R+V L+P     C  
Sbjct: 532 ERFLTWILNRYHIRDVCLYPRFVQRCTP 559


>gi|160875062|ref|YP_001554378.1| asparaginyl-tRNA synthetase [Shewanella baltica OS195]
 gi|189083414|sp|A9KZ30|SYN_SHEB9 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|160860584|gb|ABX49118.1| asparaginyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315267294|gb|ADT94147.1| asparaginyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 466

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 72/393 (18%), Positives = 121/393 (30%), Gaps = 58/393 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRS 67
           G   VGS V + GWV   R    GI FL + D      +      + D+   E+ K    
Sbjct: 12  GEHAVGSKVTVRGWVRTRRDSKAGISFLAVYDGSCFNPIQGVVPNSLDNYDNEVLKLTAG 71

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             V+   G V+                EL   ++E+    ++        + +      +
Sbjct: 72  CSVVM-TGDVVESPGAGQA-------FELQVTELEVAGWVDDPDTYPMAAKRHSIEHLRE 123

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
              L  R + +      R  +  ++      E FI  STP++TAS  EGA +    S ++
Sbjct: 124 LAHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVSTLD 183

Query: 188 QG--------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                            F+   A      Q      A    + +   P FR E+  + R 
Sbjct: 184 MENLPRTDAGKVDYDKDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTSRH 243

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL--------------- 275
             EF+ ++ E++F   +DI    E +L+  F            F                
Sbjct: 244 LAEFWMVEPEVAFANLNDIAGLAEAMLKYAFNAVLTERMDDLTFFAQHVDKTVIDRLQSF 303

Query: 276 ------RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
                 ++ Y DA+            P+   +   +EH  +     F   + V    +  
Sbjct: 304 VSSDFAQVDYTDAVEILQNCGRTFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDI 363

Query: 328 AIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                     R   D     A     PG+  I 
Sbjct: 364 -----KAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+    + + ++    +  +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDMRLAEMDLN----QEDYWWYRDMRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+V  + G  N+R+V  FP +  
Sbjct: 426 YGTVPHAGFGLGFERLVSYVTGVNNIRDVIPFPRAPR 462


>gi|170060018|ref|XP_001865617.1| aspartyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167878624|gb|EDS42007.1| aspartyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 524

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 68/281 (24%), Positives = 114/281 (40%), Gaps = 24/281 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-----SACFEIAKSV 65
           DL   +  + V + G VH  R  G   FL +R      Q V   +         + + SV
Sbjct: 71  DLSGCEKDALVWVRGRVHTTRSKGKQCFLVLRQQSSTVQCVVAVNDKAVSKQMVKFSGSV 130

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--------------EELP 111
             E ++ +   V+  +A+       T  +EL A +  ++S A              E+  
Sbjct: 131 PRESIVDVRARVVPVAAKIEACTEQT--LELHATEFYLVSAAKAQLPLQIEDAARPEKSD 188

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
            P   +    +  R   R LDLR             +    R  + A+ F E  TP + +
Sbjct: 189 DPEALKIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDILAAQGFTEIHTPKIIS 248

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +    S     ++ A  Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R  
Sbjct: 249 AASEGGANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHL 306

Query: 232 GEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVS 271
            EF  LD+EM+F     ++L+T+ N    +F+   +     
Sbjct: 307 TEFVGLDLEMAFKYHYHEVLDTIGNTFTEIFKGLRDNYARE 347



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF TMP                +  YD+   G EI SG  R H  E +++   
Sbjct: 416 KFPLAVRPFYTMPDPSNPKY---------SNSYDMFMRGEEILSGAQRIHDPEYLVERAK 466

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           +  I      ++      AF+ G PPH G   G++R+VML LG  N+R+ S+FP      
Sbjct: 467 HHAIDT----SKIAAYIEAFRFGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRL 522

Query: 570 DL 571
             
Sbjct: 523 TP 524


>gi|126174140|ref|YP_001050289.1| asparaginyl-tRNA synthetase [Shewanella baltica OS155]
 gi|304411318|ref|ZP_07392932.1| asparaginyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307305360|ref|ZP_07585108.1| asparaginyl-tRNA synthetase [Shewanella baltica BA175]
 gi|166231673|sp|A3D3V7|SYN_SHEB5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|125997345|gb|ABN61420.1| asparaginyl-tRNA synthetase [Shewanella baltica OS155]
 gi|304350173|gb|EFM14577.1| asparaginyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306911663|gb|EFN42088.1| asparaginyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 466

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 73/393 (18%), Positives = 120/393 (30%), Gaps = 58/393 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRS 67
           G   VGS V + GWV   R    GI FL + D      +      + D+   E+ K    
Sbjct: 12  GEHAVGSKVTVRGWVRTRRDSKAGISFLAVYDGSCFNPIQGVVPNSLDNYDNEVLKLTAG 71

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             V+   G V+                EL    IE+    ++        + +      +
Sbjct: 72  CSVVM-TGDVVESPGAGQA-------FELQVTDIEVAGWVDDPDTYPMAAKRHSIEHLRE 123

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
              L  R + +      R  +  ++      E FI  STP++TAS  EGA +    S ++
Sbjct: 124 LAHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVSTLD 183

Query: 188 QG--------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                            F+   A      Q      A    + +   P FR E+  + R 
Sbjct: 184 MENLPRTDAGKVDYDKDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTSRH 243

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL--------------- 275
             EF+ ++ E++F   +DI    E +L+  F            F                
Sbjct: 244 LAEFWMVEPEVAFANLNDIAGLAEAMLKYAFNAVLTERMDDLTFFAQHVDKTVIDRLQSF 303

Query: 276 ------RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
                 ++ Y DA+            P+   +   +EH  +     F   + V    +  
Sbjct: 304 VSSDFAQVDYTDAVEILQNCGRTFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDI 363

Query: 328 AIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                     R   D     A     PG+  I 
Sbjct: 364 -----KAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+    + + ++    +  +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDMRLAEMDLN----QEDYWWYRDMRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+V  + G  N+R+V  FP +  
Sbjct: 426 YGTVPHAGFGLGFERLVSYVTGVNNIRDVIPFPRAPR 462


>gi|302380725|ref|ZP_07269190.1| asparagine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302311668|gb|EFK93684.1| asparagine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 461

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 67/382 (17%), Positives = 130/382 (34%), Gaps = 56/382 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDG 75
              V + GW+   R    + F+++ D      V      D+  FE ++ ++    + + G
Sbjct: 16  DKEVEVGGWIKNSRFSKNVGFIELNDGTFFNPVQIVVGKDNEDFEKSEKLKLSSAIIVVG 75

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++  S    N+       E+ A K+ +   +     P+  +R   E +R     L  R 
Sbjct: 76  KLVLTS----NSKQP---FEIQASKVIVEGES-TDDYPLQKKRHTFEFLR-TILHLRPRT 126

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           +T +     R+R+  ++        F+   TPI+T S  EGA +    + ++        
Sbjct: 127 NTFNAVFRVRSRLAFAIHKFFNERGFVYVHTPIITGSDAEGAGEMFRVTTLDLDNLPKDD 186

Query: 190 --------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F++         Q +    A  F   +   P FR E   + R   EF+ ++
Sbjct: 187 NGNIDFSQDFFSKSTNLTVSGQLQAEAYALAFRNVYTFGPTFRSEHSNTPRHAAEFWMME 246

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRI 277
            E+ F + DD+ +  E+++R + ++                              +F ++
Sbjct: 247 PEICFADLDDVCSLAEDMVRYIIKDVMENCEEEIKFFNSFVDKNLIERLTKVANKSFKKL 306

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y +AI            P+   M   TEH  +   +V        P +           
Sbjct: 307 TYTEAIDILQKSGEKFEYPVKWGMDLQTEHEKYLSEKVVD-----GPVFVTDYPKEIKAF 361

Query: 336 GNRAFCDRMNEWARSQGQPGLA 357
             R   D+    A     PG+ 
Sbjct: 362 YMRLNDDKKTVAATDLLVPGIG 383



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 71/212 (33%), Gaps = 27/212 (12%)

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-- 415
           YI   + E+        +    + V+   I     + +         + +     + +  
Sbjct: 267 YIIKDVMENCEEE----IKFFNSFVDKNLIERLTKVANKSFKKLTYTEAIDILQKSGEKF 322

Query: 416 -ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
                   +L       +    ++D P +  +            F M          +D 
Sbjct: 323 EYPVKWGMDL-QTEHEKYLSEKVVDGPVFVTD-----YPKEIKAFYMR-------LNDDK 369

Query: 475 LSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
            ++ A   DL+  G  E+  G  R    E++ Q    +G +KE  +          + G 
Sbjct: 370 KTVAAT--DLLVPGIGELIGGSQREERFELLDQKMDELGFNKEEYK----WYLDLRKYGG 423

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             HGG   G +R+VM + G  N+R+V  FP +
Sbjct: 424 VKHGGFGLGFERMVMYMTGMSNIRDVIPFPRT 455


>gi|307192131|gb|EFN75459.1| Aspartyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 527

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 60/277 (21%), Positives = 111/277 (40%), Gaps = 26/277 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKS 64
             DL        V L G +H  R  G   F+ +R       G+    +       +   +
Sbjct: 77  IKDLNKELEDQTVWLRGRLHTSRAKGKRCFIVLRQQSYTVQGLASEGSTISKQMIKFISN 136

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--- 121
           +  E ++ ++G+V S   +  + +    +IEL    + ++S A+        +   P   
Sbjct: 137 ITKESIIDVEGMVKSSPIKIESCSQKDVEIELKC--VFVISAAKPQLPLQIEDAARPINE 194

Query: 122 --------------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
                         +  R   R LDLR             I    R  +  + F+E  TP
Sbjct: 195 MDEMDESTLNIRVNQDTRLDNRVLDLRTPANQAIFRVEAGICKLFRDILTKKGFVEIHTP 254

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            + +++ EG  +    S     ++ A  Q+PQ YKQ+ +A+ FD+ F +   FR ED  +
Sbjct: 255 KIISAASEGGANVFTVSYFKSNAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNT 312

Query: 228 DRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEE 263
            R   EF  LD+EM+F     ++++T+  +   ++ +
Sbjct: 313 HRHLTEFVGLDLEMAFKYHYHEVVDTIGQMFTDLYAD 349



 Score =  110 bits (276), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF            N+     +  YD+   G EI SG  R H  E + +   +
Sbjct: 419 KYPLAVRPFYTMPD------PNNPK--ISNSYDMFMRGEEIISGAQRIHDPEFLTERAKH 470

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI       +      AF+ G PPH G   G++R+VML LG  N+R+VS+FP       
Sbjct: 471 HGIDI----EKIKSYIDAFRYGCPPHAGGGIGLERVVMLYLGLDNIRKVSMFPRDPKRLT 526

Query: 571 L 571
            
Sbjct: 527 P 527


>gi|153000465|ref|YP_001366146.1| asparaginyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217973546|ref|YP_002358297.1| asparaginyl-tRNA synthetase [Shewanella baltica OS223]
 gi|166231674|sp|A6WMP4|SYN_SHEB8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|151365083|gb|ABS08083.1| asparaginyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217498681|gb|ACK46874.1| asparaginyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 466

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 73/393 (18%), Positives = 120/393 (30%), Gaps = 58/393 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRS 67
           G   VGS V + GWV   R    GI FL + D      +      + D+   E+ K    
Sbjct: 12  GEHAVGSKVTVRGWVRTRRDSKAGISFLAVYDGSCFNPIQGVVPNSLDNYDNEVLKLTAG 71

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             V+   G V+                EL    IE+    ++        + +      +
Sbjct: 72  CSVVM-TGDVVESPGAGQA-------FELQVTDIEVAGWVDDPDTYPMAAKRHSIEHLRE 123

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
              L  R + +      R  +  ++      E FI  STP++TAS  EGA +    S ++
Sbjct: 124 LAHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVSTLD 183

Query: 188 QG--------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                            F+   A      Q      A    + +   P FR E+  + R 
Sbjct: 184 MENLPRTEAGKVDYDKDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTSRH 243

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL--------------- 275
             EF+ ++ E++F   +DI    E +L+  F            F                
Sbjct: 244 LAEFWMVEPEVAFANLNDIAGLAEAMLKYAFNAVLTERMDDLTFFAQHVDKTVIDRLQSF 303

Query: 276 ------RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
                 ++ Y DA+            P+   +   +EH  +     F   + V    +  
Sbjct: 304 VSSDFAQVDYTDAVEILQNCGRTFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDI 363

Query: 328 AIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                     R   D     A     PG+  I 
Sbjct: 364 -----KAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+    + + ++    +  +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDMRLAEMDLN----QEDYWWYRDMRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R+V  + G  N+R+V  FP +  
Sbjct: 426 YGTVPHAGFGLGFERLVSYVTGVNNIRDVIPFPRAPR 462


>gi|332288091|ref|YP_004418943.1| asparaginyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330430987|gb|AEC16046.1| asparaginyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 467

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 66/388 (17%), Positives = 127/388 (32%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVLC 72
           +G    + GWV   R    G+ FL + D      +    +            + +   + 
Sbjct: 17  IGETATVQGWVRTRRDSKAGVSFLAVYDGSCFAPIQVVIEQTIENYQSEILRLTAGCSVI 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V++  A+          +E+ AQK+E+    E+        + +      +   L 
Sbjct: 77  VTGKVVASPAQGQA-------VEMQAQKVEVCGWVEDPDTYPMAAKRHSVEYLREVAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R + +      R  +  ++      + F   +TP++TAS  EGA +    S ++  +  
Sbjct: 130 PRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEGAGEMFRVSTLDLTNLP 189

Query: 193 ALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
              Q    + Q                    A    + +   P FR E+  + R   EF+
Sbjct: 190 KTEQGEIDFSQDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTTRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ EM+F    D     E++L+ VF+   +                      + +S++F
Sbjct: 250 MVEPEMAFATLADNAKLAEDMLKYVFKAVLDERMDDMEFFAKHIDNTVISRLQDFISSDF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            ++ Y DAI            P+   +   +EH  +     F   + V    +       
Sbjct: 310 AQVDYTDAIEILKKSGKKFEFPVEWGIDLSSEHERYLAEEHFKSPVVVKNYPKDI----- 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 365 KAFYMRLNDDGKTVAAMDVLAPGIGEII 392



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 81/222 (36%), Gaps = 20/222 (9%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD---- 415
           FW ++     A +   AK    +     +  LD +  D  FF         S   D    
Sbjct: 248 FWMVEPEMAFATLADNAKLAEDMLKYVFKAVLDERMDDMEFFAKHIDNTVISRLQDFISS 307

Query: 416 --ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM----PQGGMES- 468
             A+      + I+  +  +F + +++   + + E ++     +  +             
Sbjct: 308 DFAQVDYTDAIEILKKSGKKFEFPVEW-GIDLSSEHERYLAEEHFKSPVVVKNYPKDIKA 366

Query: 469 --LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
             ++ ND     A   D++  G  EI  G  R    EV+ +    +G+ K      +   
Sbjct: 367 FYMRLNDDGKTVA-AMDVLAPGIGEIIGGSQREERLEVLDKRMDEMGLKK----EDYWWY 421

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
               + G  PH G   G +R+++ + G +N+R+V  FP +  
Sbjct: 422 RDLRRYGTVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRAPR 463


>gi|297834174|ref|XP_002884969.1| hypothetical protein ARALYDRAFT_478735 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330809|gb|EFH61228.1| hypothetical protein ARALYDRAFT_478735 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 603

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 59/335 (17%), Positives = 132/335 (39%), Gaps = 11/335 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y+  + G+   +++   V ++G V   R  G + FL +RD  G  Q+         +  +
Sbjct: 121 YKHLANGEESDNEID-RVSIAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKGRLSDDQFE 179

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++    +   G ++  S          G++ +      IL+ +  LPLP          
Sbjct: 180 QLKQFIDI---GDILGASGSMKRTE--KGELSICVNSFSILTKSL-LPLPDKYHGLTDID 233

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            R++ R++D+     +     +R +I++ +R  + +  ++E  TP+L  ++        V
Sbjct: 234 KRYRQRYVDMIANPEVADVFRRRAKIVSEIRKTVESFGYLEVETPVLQGAAGGAEARPFV 293

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
               + G    L  A + + + ++  GF++ ++I   FR+E   +   P EF  ++M  +
Sbjct: 294 TFHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNP-EFTTIEMYEA 352

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           + +   +++  E ++       +   T+      IC +   RR      +L   I   N 
Sbjct: 353 YSDYQSMMDMAELIVTQCSMAVNGKLTIDYQGTEICLERPWRR--ETMHNLVKEITGINF 410

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
           +E          + +L++    E       G   +
Sbjct: 411 SELGEDLGNAKDTVLLALQDVLEPKDKSGIGACSS 445



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 68/226 (30%), Gaps = 56/226 (24%)

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK--------FCSFAADARNHIA 421
             M  + K +  +N   +   L     D+      D L+         CS      N + 
Sbjct: 396 ETMHNLVKEITGINFSELGEDLG-NAKDTVLLALQDVLEPKDKSGIGACSSLGHLLNEVF 454

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   ++     +  +++D+P      E   +   H                   +    +
Sbjct: 455 EV--VVEPKLVQPTFVLDYPV-----EISPLAKPHR----------------SNAALTER 491

Query: 482 YDLVCNGFEIASGGIRNHMSEVM-----LQAFSNVGISKEVVENRFG------------- 523
           ++L   G E+A+                 Q   +     E                    
Sbjct: 492 FELFICGREMANAFSELTDPVDQRTRLEEQVRQHNAKRAEAASEYAEPNAKKDDDDDESY 551

Query: 524 ------GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                     A + GMPP  G+  GIDR+VMLL  + ++R+V  FP
Sbjct: 552 EVTLDEDFLTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFP 597


>gi|158321362|ref|YP_001513869.1| asparaginyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|166980084|sp|A8MJ91|SYN_ALKOO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|158141561|gb|ABW19873.1| asparaginyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 463

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 65/376 (17%), Positives = 120/376 (31%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
                G  + + GW+  +R      F+++ D       QVV       F     +     
Sbjct: 13  TEKYAGQEIVIEGWIRTLRASKAFGFIEVNDGSFFKNIQVVFEEGLENFAEVSKLSISTA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +                 E+ A  IE+   ++    P+  +R   E +R +   
Sbjct: 73  IIVKGKLEITPD-------AKQPFEIKATSIEVEGESDSDY-PLQKKRHTFEFLR-EIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++        F+   TPI+T S  EGA +    + ++   
Sbjct: 124 LRPRSNTFSAVFRVRSLAAFAIHQFFQERGFVYTHTPIITGSDAEGAGEMFRITTLDPKN 183

Query: 190 -------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+    +     Q +    A  F   +   P FR E+  + R   E
Sbjct: 184 PGLNEAGEVDFTKDFFGKETSLTVSGQLQGEAYALAFRNIYTFGPTFRAENSHTARHASE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +  D +   E +L+ +             F                   
Sbjct: 244 FWMIEPEIAFADLQDNMELAEEMLKYIINYVMENAPEEMEFFNSFVDKGLLDRLNNVATS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+       TEH  +   +VF K + V    +     
Sbjct: 304 DFGRVTYTEAIEILQKSGETFEYPVAWGTDLQTEHERYLTEKVFKKPVFVTDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  ++NE
Sbjct: 361 -------KAFYMKLNE 369



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 52/150 (34%), Gaps = 26/150 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +  ++ D+P        K I      F M           D  ++ A  
Sbjct: 338 HERYLTEKVFKKPVFVTDYP--------KDIKA----FYMK-------LNEDGKTVAAM- 377

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  EI  G  R     ++ +    +G+ K      +       + G   H G  
Sbjct: 378 -DLLVPGIGEIIGGSQREDNLALLEERMDAMGLDK----EEYWWYLELRKYGSARHAGYG 432

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R +M L G  N+R+V  FP +    +
Sbjct: 433 LGFERAIMYLTGMSNIRDVISFPRTPKSAE 462


>gi|147898923|ref|NP_001080050.1| lysyl-tRNA synthetase [Xenopus laevis]
 gi|28302358|gb|AAH46578.1| Kars-prov protein [Xenopus laevis]
          Length = 605

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 60/276 (21%), Positives = 120/276 (43%), Gaps = 14/276 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           + +Y +   G+     +   + ++G +H  R  G  +IF D+R      QV+AN  S  +
Sbjct: 122 IQKYNSLQTGE----QLSEVISVAGRIHAKRISGAKLIFYDLRGEAAKLQVMAN--SKFY 175

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           ++ +   +       G ++             G++ +   +I +LS      LP      
Sbjct: 176 KLEEEFTAINNRLRRGDLIGVKGNP--GKTKKGELSIIPHEITLLSPCL-HMLPHLHFGL 232

Query: 120 YPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
             +  RF+ R+LDL   D + +  + R ++I  +R  +    F+E  TP++        A
Sbjct: 233 KDKETRFRQRYLDLILNDYVRQKFIVRAKLITYLRKFLDNLGFLEIETPMMNVIPGGAVA 292

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F+          Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   
Sbjct: 293 KPFITHHNELDMKLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTC 350

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +  M++ + +D++   E +L G+ +  + G  V+ +
Sbjct: 351 EFYMAYADYNDLMEITEKLLSGMVKHITGGYKVTYH 386



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      + F +   +K   ++           A +
Sbjct: 491 EKGLTERFELFVMKKEICNAYTELNDPIRQRELFEDQAKAKAAGDDEAMFIDETFCTALE 550

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 551 YGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMK 586


>gi|304312853|ref|YP_003812451.1| Asparaginyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301798586|emb|CBL46816.1| Asparaginyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 473

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 121/380 (31%), Gaps = 50/380 (13%)

Query: 22  RLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
            L+GWV   R   GG  F+ + D      +    D++       +         G  +  
Sbjct: 29  TLAGWVRSRRDSKGGFSFVLLHDGSCFDGLQVVLDASLANYETEILKLSA----GCSIRV 84

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           S   + +       EL A  +E+L   E+       ++ +          L  R +T   
Sbjct: 85  SGVLLASQGKGQAYELKADTLEVLGWVEDPESYPIAKKRHTLEYLRSVAHLRPRTNTFGA 144

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN------------- 187
               R  +  ++     A  F   +TPI+TAS  EGA +    S ++             
Sbjct: 145 MARMRNSLSQAIHRYFDAHGFFWVNTPIITASDCEGAGEMFRVSTLDFLKLPRNAAGQVD 204

Query: 188 -QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               F+   A      Q       +   R +   P FR E+  + R   EF+ ++ EM+F
Sbjct: 205 FSQDFFGKEAFLTVSGQLNGEAFCTALSRIYTFGPTFRAENSNTSRHLAEFWMVEPEMAF 264

Query: 244 VEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRICYDDA 282
            +   I +  E  L+ V  +  N                      N +   F R+ Y +A
Sbjct: 265 ADLATIADVAEAFLQSVVSDLLNARDADIAFFTEHYDKQLRGRLENVIHQPFARMSYTEA 324

Query: 283 IRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
           +        + + P+   +   +EH         ++  +  P   +    A      R  
Sbjct: 325 VSILQKSGKEFQFPVQWGLDLQSEHER-----FLAEEYAKRPVIVMDYPEAIKAFYMRRN 379

Query: 341 CDRMNEWARSQGQPGLAYIF 360
            D     A     PG+  I 
Sbjct: 380 DDGKTCAAMDILAPGIGEII 399



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 78/224 (34%), Gaps = 19/224 (8%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD---- 415
           FW ++     A +  +A          +   L+ +D D  FF      +      +    
Sbjct: 255 FWMVEPEMAFADLATIADVAEAFLQSVVSDLLNARDADIAFFTEHYDKQLRGRLENVIHQ 314

Query: 416 --ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI--DFAHNPFT-MPQGGMES-- 468
             AR    + + I+  +  EF + + +     +E E+ +  ++A  P   M         
Sbjct: 315 PFARMSYTEAVSILQKSGKEFQFPVQWGLDLQSEHERFLAEEYAKRPVIVMDYPEAIKAF 374

Query: 469 -LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
            ++ ND     A   D++  G  EI  G  R     ++ +  +        +    G   
Sbjct: 375 YMRRNDDGKTCA-AMDILAPGIGEIIGGSQREERLALLDEKMA-----PLGLAENLGWYR 428

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              + G  PH G   G +R++    G +N+R+   FP      +
Sbjct: 429 DLRRYGTIPHAGFGLGFERLLTYATGMENIRDAIPFPRVPGSAE 472


>gi|213512448|ref|NP_001134011.1| Aspartyl-tRNA synthetase, cytoplasmic [Salmo salar]
 gi|209156148|gb|ACI34306.1| Aspartyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 531

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 80/379 (21%), Positives = 142/379 (37%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           +L     G  + +   +H  R  G   FL +R        +  V         + A ++ 
Sbjct: 80  ELTPEKAGQLIWVRARIHTSRAKGKQCFLVLRQQQFNVQALVAVGERASKQMVKFAANIN 139

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-------------P 113
            E ++ ++ +V     E    +     +EL  ++I ++S AE                  
Sbjct: 140 KESIVDVEAVVKKV--EQTIESCSQQDVELHIERIFVISQAEPRLPLQLEDCVRPEGEGD 197

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ +    R  +  + F+E  TP + +++
Sbjct: 198 EDGRATVNQDTRLDNRVIDLRTTTSQAIFRLQSGVCQLFRDTLTNKGFVEIQTPKIISAA 257

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + FD+ F + P FR ED  + R   E
Sbjct: 258 SEGGANVFTVSYFKTSAYLA--QSPQLYKQMCICADFDKVFCVGPVFRAEDSNTHRHLTE 315

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF-------- 274
           F  LD+E++F        + I +TM  + +G+ ++F            S  F        
Sbjct: 316 FVGLDIELAFNYHYHEVIESITDTMVQIFKGLRDKFQTEIQTVGKQYPSEPFKFLEPTLR 375

Query: 275 LRICYDDAIRR----YGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           L      A+ R       D+ DL  P    +  + +    ++F V  K  L+V P Y + 
Sbjct: 376 LEYSEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFYTMP 435

Query: 328 AIPAKGGGGNRAFCDRMNE 346
               K    +     R  E
Sbjct: 436 DPNDKKYSNSYDMFMRGEE 454



 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                   +  YD+   G EI SG  R H ++++ +   +
Sbjct: 423 KYPLAVRPFYTMPD--------PNDKKYSNSYDMFMRGEEILSGAQRIHDAQLLTERAMH 474

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I       +      +F+ G PPHGG   G++R+ ML LG  NVR+ S+FP       
Sbjct: 475 HNIDL----EKIKSYIDSFRYGAPPHGGGGIGLERVCMLYLGLHNVRQTSMFPRDPKRLT 530

Query: 571 L 571
            
Sbjct: 531 P 531


>gi|139438509|ref|ZP_01772025.1| Hypothetical protein COLAER_01018 [Collinsella aerofaciens ATCC
           25986]
 gi|133776048|gb|EBA39868.1| Hypothetical protein COLAER_01018 [Collinsella aerofaciens ATCC
           25986]
          Length = 654

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 65/294 (22%), Positives = 123/294 (41%), Gaps = 19/294 (6%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVL 71
            D    V++ G V   R  G I+F+ IRD  G  Q+     + D A +   K++    +L
Sbjct: 60  EDTEDVVKIGGRVVAKRGQGKIMFIVIRDATGEVQLFCRINDMDEAAWSTLKALDLGDIL 119

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G+V+             GQ+ ++ +   +LS A   PLP        +  R++ R++
Sbjct: 120 GVTGVVVRTKR---------GQLSVAPKSATLLSKAVR-PLPEKFHGLSDKETRYRQRYV 169

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQG 189
           DL   D + +   KR++I+++ R  M ++ ++E  TPIL        A+ F+        
Sbjct: 170 DLIANDDVRETFRKRSQILSTFRRFMESDGYMEVETPILQTIQGGATAKPFITHFNALDQ 229

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y L  A + + +  +  GF+R F+I   FR+E       P EF  ++   +F + + +
Sbjct: 230 ECY-LRIATELHLKRCIVGGFERVFEIGRIFRNEGMDLTHNP-EFTTMEAYRAFSDLEGM 287

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
               + V++   +   N   +      I              D+ + ++   VT
Sbjct: 288 KALAQGVIKAANKAIGNPEVIEYQGQTIDLSGEWAS--RPMTDIVSDVLGKKVT 339



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 60/160 (37%), Gaps = 27/160 (16%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             A      I  ELG          ++ D+P  E +   K+ +                 
Sbjct: 362 WTAGKIIAEIYDELG--EDTIVNPTFVCDYPI-EVSPLAKRFE----------------- 401

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLY 526
            +D       +++LV  G E A+     +      + F+     K    +          
Sbjct: 402 -DDPR--LTHRFELVIAGHEYANAFSELNDPVDQAERFAAQMAEKAGGDDEAMEYDEDYV 458

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           RA + GMPP GGI  GIDR+VMLL    ++R+V LFP  +
Sbjct: 459 RALEYGMPPAGGIGIGIDRVVMLLTNQASIRDVLLFPHMK 498


>gi|269961689|ref|ZP_06176050.1| asparaginyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269833554|gb|EEZ87652.1| asparaginyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 472

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 125/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 22  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNN----LNNYDNEVLKLTTG 77

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 78  CSVEVTGKIVASPAKGQDFELAATDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 137

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++        
Sbjct: 138 NVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTE 197

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 198 EGKVDYNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 257

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            E++F E DD+    E++L+ VF+           F                      ++
Sbjct: 258 PEVAFAELDDVAKLAEDMLKFVFKAVLAECRDDLEFFAQRIDKEAITRLEQFVSSDFAQV 317

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI+       +   P+   +   +EH        F   + V    +          
Sbjct: 318 DYTDAIQILLDSGREFEFPVEWGIDMSSEHERFLAEEHFKAPVIVKNYPKDI-----KAF 372

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             RA  D     A     PG+  I 
Sbjct: 373 YMRANDDGKTVAAMDVLAPGIGEII 397



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 6/102 (5%)

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           ++ ND     A   D++  G  EI  G  R    +++      VGI              
Sbjct: 374 MRANDDGKTVA-AMDVLAPGIGEIIGGSQREERLDILDARMREVGIDP----EHMSWYRD 428

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 429 LRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 470


>gi|291296661|ref|YP_003508059.1| aspartyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290471620|gb|ADD29039.1| aspartyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 423

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 82/345 (23%), Positives = 140/345 (40%), Gaps = 32/345 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            + VG  V L G++H  R  GGI F  +RD  GI QVV +         +   +E  + +
Sbjct: 10  AAHVGQTVTLQGFLHWKRDLGGIQFALLRDRSGIVQVVVDKR------FELPLAESSMRV 63

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YPESIRFKYRFL 131
            G V++ +          G  E+ AQ+IE  + A E       + E         +YR++
Sbjct: 64  VGEVVANAK-------APGGYEVVAQEIEFYAKASEPSPIEIPKEEWRVNPETLLEYRYV 116

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR +     +  +  ++   R  + ++ F E  TP + ++  EG  +          ++
Sbjct: 117 SLRGEKARAPLKIQAALVRGFRSYLDSQGFTEIFTPKIVSAGAEGGSNLFGIDYFEHRAY 176

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DIL 250
            A  Q+PQ YKQ +M   F+R +++AP FR E   + R   E+  LD+EM F+E + D++
Sbjct: 177 LA--QSPQLYKQ-IMVGVFERVYEVAPVFRAEQHATSRHLNEYLSLDVEMGFIESEQDVM 233

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL-RNPIIMHNVTEHFVHS 309
           +  E ++R + +E            R          G + P+L   P + H      +  
Sbjct: 234 DLEEELIRAMLDE-----------ARHTAAPECELLGVEWPNLAEMPRLEHPEARRILRE 282

Query: 310 EFRVFSKILSVNPGYEVWAIPAK-GGGGNRAFCDRMNEWARSQGQ 353
           E  +                 AK   G +  F  +  E AR    
Sbjct: 283 ELGMPVGADFNEEAERALGAWAKEKWGVDFLFISKYPESARPFYA 327



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 32/169 (18%)

Query: 415 DARNHIAQELGIINCNCFEFC------------WIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           +AR  + +ELG+     F               W +DF F        K   +  PF   
Sbjct: 275 EARRILREELGMPVGADFNEEAERALGAWAKEKWGVDFLFIS------KYPESARPFYAY 328

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
             G                +DL+  G EI SGG R H  EV+++     G         F
Sbjct: 329 PEGD----------GSTRGFDLLFRGLEITSGGQRIHQYEVLVEQLKKKGNDP----AHF 374

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G    F+ GMPPHGG A G +R+   L+G  NVR    FP  ++    
Sbjct: 375 AGYLEVFKYGMPPHGGFAIGAERLTQKLVGLPNVRYARAFPRDRHRLTP 423


>gi|228469775|ref|ZP_04054733.1| asparaginyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228308614|gb|EEK17365.1| asparaginyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 471

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 103/276 (37%), Gaps = 27/276 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             V + GWV   R +  + F+ + D   I   Q+V +      ++ + + +   + + G 
Sbjct: 23  QPVCVKGWVRTKRGNKAVCFVALNDGSTIHSIQIVIDKTQTDPKLIEQITTGAAIGVVGT 82

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +++   +         + E+ A +I I   ++ +  P+  +    E +R +   L  R +
Sbjct: 83  LVASQGQG-------QEYEIQASEITIYGTSDPVRYPLQKKGHTLEFLR-EIAHLRPRTN 134

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------- 189
           T    +  R  +  ++        +    TPI+T+S  EGA      + ++         
Sbjct: 135 TFAAVLRIRHNMAYAIHTFFHERGYFYLHTPIITSSDAEGAGQMFTVTTLDMNKLPLAKD 194

Query: 190 -------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+    +     Q +  L A      +   P FR E+  + R   EF+ ++ 
Sbjct: 195 GSVDYSKDFFGKHTSLTVSGQLEGELGAMALGGIYTFGPTFRAENSNTPRHLAEFWMVEP 254

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           E++F++ +   +  E   +   +   +       FL
Sbjct: 255 EVAFMDNEGNQDLAEAFTKHCLQWALDHCMDDLEFL 290



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 74/230 (32%), Gaps = 29/230 (12%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406
           +  ++G   LA  F +      +       + L     + +  R+         F+    
Sbjct: 258 FMDNEGNQDLAEAFTKHCLQWALDHCMDDLEFLAEHYDKELIERIRFVV--ERPFVRTTY 315

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEF--CWIMDFPFYEWNEEEKKIDFAHN---PFTM 461
            +  +   +A         + N   FEF   W  D        E ++     +   P  M
Sbjct: 316 TEGVAILEEA---------VRNGKKFEFPVYWGAD-----LASEHERYLVEQHYNAPVIM 361

Query: 462 PQGGME----SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
                E     +K N+          L  +  EI  G  R    + +      VGI  + 
Sbjct: 362 TDYPKEIKAFYMKQNEDGKTVRGMDVLFPHIGEIIGGSERETDIDKLTARAQEVGIKDKD 421

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +           + G  PH G   G +R+++ + G  N+R+V  FP + N
Sbjct: 422 LW----WYLDTRRYGSAPHAGFGLGFERLLLFVTGMTNIRDVIPFPRTPN 467


>gi|170017007|ref|YP_001727926.1| asparaginyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|169803864|gb|ACA82482.1| Asparaginyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 435

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 68/310 (21%), Positives = 121/310 (39%), Gaps = 32/310 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
              VG  V++  W+ + R  G I FL +RD           A+   + F++ KS++ E  
Sbjct: 14  KKYVGQTVKIGAWLRQKRGSGKIAFLQLRDGTAFFQGVVAKADVPESVFDVVKSLKQETS 73

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G +      +          E++   +EI+  + + P+     +E+     F  R 
Sbjct: 74  LYVVGEIHEDERSSF-------GYEIAISDVEIIGESHDYPITP---KEHGTEFLFDERH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R  +I +         F +  +P+LT S+PEG  +        + +
Sbjct: 124 LYLRHLKPFATLKIRNTLIAATYEFFNERGFTKLDSPLLTGSAPEGTTELFETDYFGEPA 183

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L Q  Q Y     A  F + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L
Sbjct: 184 F--LSQTGQLY-AEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMVEPEMAFMHQEESL 240

Query: 251 NTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPDLR 294
              E  +  +  +    N                     + R+ YDDAI+    +  D+ 
Sbjct: 241 EIQEAYIAFLIAKVLERNEQELDILERDKDLLRSYTELPYPRVSYDDAIKLLQDNGFDVA 300

Query: 295 NPIIMHNVTE 304
             +   +  E
Sbjct: 301 WGVDFGSPEE 310



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 17/151 (11%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           ++  N F+  W +DF        E+     H    +             +   A + D+V
Sbjct: 291 LLQDNGFDVAWGVDF-----GSPEETFLANHFAKPVFIVNFPKAIKAFYMKRHATRDDVV 345

Query: 486 C--------NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
                       EI  G  R+   + + +  +  G++    ++ +       + G  PH 
Sbjct: 346 ISADLLAPEGYGEIIGGSERDTDYDYLKERIAAEGLN----QDEYEWYLDLRKYGSVPHS 401

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           G   G++R+V  + G +++RE   FP   N 
Sbjct: 402 GFGLGLERMVTFVTGEEHIREAIPFPRMTNR 432


>gi|297578880|ref|ZP_06940808.1| asparaginyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297536474|gb|EFH75307.1| asparaginyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 481

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 124/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 31  VDSEVTVRGWIRTRRDSKAGISFLAIYDGSCFNPIQAVVPNN----LNNYDNEVLKLTTG 86

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 87  CSVEVTGKIVESPASGQAFELAASDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 146

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++  +     
Sbjct: 147 NVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPCTD 206

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                Y Q                    A    + +   P FR E+  + R   EF+ ++
Sbjct: 207 AGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNTSRHLAEFWMVE 266

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + + +    E++L+ VF+                            V ++F ++
Sbjct: 267 PEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARLEQFVESDFAQV 326

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI            P+   +   +EH        F   + V    +          
Sbjct: 327 DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHFKAPVIVKNYPKDI-----KAF 381

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 382 YMRMNEDGKTVAAMDVLAPGIGEII 406



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 14/113 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M           D  ++ A   D++  G  EI  G  R    +++       GI   
Sbjct: 380 AFYMRMNE-------DGKTVAAM--DVLAPGIGEIIGGSQREERLDILDARMREFGIDP- 429

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                        + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 430 ---EHMDWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 479


>gi|149278398|ref|ZP_01884535.1| asparaginyl-tRNA synthetase [Pedobacter sp. BAL39]
 gi|149230768|gb|EDM36150.1| asparaginyl-tRNA synthetase [Pedobacter sp. BAL39]
          Length = 482

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 57/291 (19%), Positives = 116/291 (39%), Gaps = 30/291 (10%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEI 61
            R      L   +    VR+ GWV   R +    F+ I D   +   Q+V + +    E+
Sbjct: 3   KREKIKSLLETEEFNRAVRVMGWVRTFRNNQ---FIAINDGSCMGNIQIVVDFNQTPEEL 59

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K + +   + + G ++    +         ++++ A +IEIL  ++    P+  ++   
Sbjct: 60  LKRITTGAAIAVTGEIVESVGKG-------QRVDIKATEIEILGDSDPEKFPLQPKKHSL 112

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R +   L  R +T +     R  +  ++        F+   TP++TAS  EGA +  
Sbjct: 113 EFLR-EIAHLRFRTNTFNAVFKIRHALAFAIHKFYNERGFVYMHTPVITASDAEGAGEMF 171

Query: 182 VPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             + ++                 F+A         Q +  L A  F + +   P FR E+
Sbjct: 172 KVTTLDFDNPPRTDDGKVDFSEDFFARATNLTVSGQLEGELAAMAFGQIYTFGPTFRAEN 231

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
             + R   EF+ ++ E++F + +D +   E++++ V            +FL
Sbjct: 232 SNTTRHLAEFWMIEPEIAFADLEDNMQLAEDMMKFVISYALENCKEEIDFL 282



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 48/143 (33%), Gaps = 20/143 (13%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +  +   + D+P                 F M Q   +S     + ++    
Sbjct: 353 HERYLVEKHFKKPVILTDYP------------ADIKSFYMRQNEPDSQGRKTVAAMDI-- 398

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     E+  G  R    + +      + I     ++         + G  PH G   
Sbjct: 399 --LFPGIGEMIGGSQREERLDKLTTRMEELNIP----QDELWWYLDTRRFGSAPHAGFGL 452

Query: 542 GIDRIVMLLLGAKNVREVSLFPM 564
           G +R+++ + G  N+R+V  FP 
Sbjct: 453 GFERLILFVTGMTNIRDVIAFPR 475


>gi|257456472|ref|ZP_05621668.1| asparaginyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257446132|gb|EEV21179.1| asparaginyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 473

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 71/397 (17%), Positives = 127/397 (31%), Gaps = 55/397 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L     G  V + GWV   R    +IF+ + D      +    D     I      E   
Sbjct: 9   LMQKPDGQEVAVYGWVRTKRETKNLIFIQVNDGSCFASIQLTFDRDK-GIDSQTEKELSR 67

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  +   + +      +E++A+ I +   A     P+  +R   E +R     L
Sbjct: 68  ITTGASIKATGALVESPASGQAVEVAAKTIFVYGEASGETYPLQKKRHTFEFLR-DIAHL 126

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +T       R ++  ++        F    TP++TAS  EGA +    + ++    
Sbjct: 127 RARTNTFGAVARVRNQMAFAVHNFFQEHGFQYVHTPLITASDSEGAGEMFQVTTLDMQEI 186

Query: 190 --------------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
                                F+   A      Q +    A+   R +   P FR E+  
Sbjct: 187 VRKALKDKADPATFILDYKQDFFERAAYLTVSGQLEIETYATALSRVYTFGPTFRAENSN 246

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT----------------- 269
           + R   EF+ ++ EMSF   +D ++  E  +  + +                        
Sbjct: 247 TTRHLSEFWMIEPEMSFFRLEDNMDLAEKFVVYLLKWALTHCRADLEFFNAQIKPGLIET 306

Query: 270 ----VSNNFLRICYDDAIRRYGTDKPDLRN-PIIMHNV-TEHFVHSEFRVFSKILSVNPG 323
               V + F RI Y DA++       +    P    ++ +EH  +   +VF   + V   
Sbjct: 307 LEHVVESKFTRITYTDAVKELEKHASEFEFKPFWGCDLQSEHEKYLTEQVFKGPVIVTDY 366

Query: 324 YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +           +      M+        PGL  I 
Sbjct: 367 PKEIKAFYMKQNDDGKTVRAMDVLV-----PGLGEII 398



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 24/137 (17%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
              + D+P     +E K        F M Q         D  +++A   D++  G     
Sbjct: 360 PVIVTDYP-----KEIK-------AFYMKQND-------DGKTVRAM--DVLVPGLGEII 398

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           GG     +  +    + +      ++N +       + G  PH G   G DR+++ + G 
Sbjct: 399 GGSEREDN--LAALETRMNELGLDMKNYW-WYLDLRRYGSVPHSGFGLGFDRLLLYVTGM 455

Query: 554 KNVREVSLFPMSQNFCD 570
            N+R+V  +P +    +
Sbjct: 456 ANIRDVIPYPRTPKSAE 472


>gi|296328765|ref|ZP_06871279.1| asparagine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296154100|gb|EFG94904.1| asparagine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 461

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 71/413 (17%), Positives = 132/413 (31%), Gaps = 56/413 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
           G   +   + L GWV ++R      F+++ D       Q+V       F+    +     
Sbjct: 11  GKDYLDKEIELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEISRLSIAST 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G+++               +E+ A KIEI   A+ L  P+  +R   E +R K   
Sbjct: 71  IKVKGVLVKSQGSG-------QDLEVKADKIEIFQKAD-LEYPLQNKRHTFEYLRTK-AH 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++       NF+   TPI+T S  EGA +    + ++   
Sbjct: 122 LRARTNTFSAVFRVRSVLAYALHKFFQENNFVYVHTPIITGSDAEGAGEMFRITTLDLNK 181

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       + F   +   P FR E   + R   E
Sbjct: 182 VPKKENGEVDFSKDFFGKSTNLTVSGQLNGETYCAAFRNIYTFGPTFRAEYSNTARHASE 241

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F + +  +   E +++ + +   +       F                   
Sbjct: 242 FWMIEPEIAFGDLNANMELAEAMVKYIIKYVMDNCPEEMEFFNSFIEKGLFDKLNNVLNN 301

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+   +   +EH  +     F K     P +      
Sbjct: 302 DFGRVTYTEAIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYFKK-----PVFVTDYPK 356

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVN 383
                  +   D     A     PG+  I        N   +    K L +  
Sbjct: 357 DIKAFYMKLNEDNKTVRAMDLLAPGIGEIIGGSQREDNYELLTKRMKELGLKE 409



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P        K I      F M           D  +++A   DL+  G  EI
Sbjct: 347 KPVFVTDYP--------KDIKA----FYMK-------LNEDNKTVRAM--DLLAPGIGEI 385

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    E++ +    +G+     E  +       + G  PH G   G +R++M L 
Sbjct: 386 IGGSQREDNYELLTKRMKELGLK----EEDYEFYLDLRRFGSFPHSGYGLGFERMMMYLT 441

Query: 552 GAKNVREVSLFPMSQN 567
           G +N+R+V  FP + N
Sbjct: 442 GMQNIRDVIPFPRTPN 457


>gi|331092530|ref|ZP_08341352.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330400751|gb|EGG80354.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 463

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 62/357 (17%), Positives = 117/357 (32%), Gaps = 51/357 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   + + GWV  +R      F+ + D       QVV +     F     +     
Sbjct: 13  REQYLDKEISVGGWVRSIRDSKTFGFIVVNDGSFFETLQVVYHDTMENFAEISKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A ++ I+  A     P+  +R   E +R     
Sbjct: 73  IIVKGTLVATPQ-------AKQLFEIQATEV-IVEGASAPDYPLQKKRHSFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ I  ++        F+   TPI+T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSLIAYAIHQFFQERGFVYVHTPIITGSDCEGAGEMFRVTTLDMEN 183

Query: 190 -------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+    +     Q      A  F   +   P FR E+  + R   E
Sbjct: 184 LPKNEDGTVDYSQDFFNKETSLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSN 272
           F+ ++ E++F + DD +   E +L+ +                            N  ++
Sbjct: 244 FWMVEPEIAFADLDDNMMLAEAMLKYIINYVLENAPEEMNFFNSFVDKGLLDRLHNVANS 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVW 327
            F R+ Y +AI     +       +       TEH  +    VF + + V    +  
Sbjct: 304 EFARVTYTEAIELLEKNNDKFDYKVSWGADLQTEHERYLTEEVFKRPVFVTDYPKDI 360



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 52/150 (34%), Gaps = 24/150 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +         ++ D+P        K I      F M          ND     A  
Sbjct: 338 HERYLTEEVFKRPVFVTDYP--------KDIKA----FYMKM--------NDDNKTVAAV 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    E +L   + +G+  E  +          + G   H G   
Sbjct: 378 DCLVPGIGEIIGGSQREDDYEKLLARMNEMGLKPEEYQ----FYLDLRKYGSTRHAGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R VM L G  N+R+V  FP + N C+L
Sbjct: 434 GFERCVMYLTGMSNIRDVLPFPRTVNNCEL 463


>gi|34763750|ref|ZP_00144669.1| Asparaginyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|27886486|gb|EAA23742.1| Asparaginyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
          Length = 461

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 69/390 (17%), Positives = 125/390 (32%), Gaps = 56/390 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
           G   +   + L GWV ++R      F+++ D       Q+V       F+    +     
Sbjct: 11  GEDYLDKEIELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSISST 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++               +E+ A KIEI   A+ L  P+  +R   E +R K   
Sbjct: 71  IKVKGTLVKSQGSG-------QDLEVKADKIEIFQKAD-LEYPLQNKRHTFEYLRTK-AH 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++       NF+   TPI+T S  EGA +    + ++   
Sbjct: 122 LRARTNTFSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEMFRVTTLDMNK 181

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       + F   +   P FR E   + R   E
Sbjct: 182 LPKKENGEIDFTKDFFGKSTNLTVSGQLNVETFCAAFRNVYTFGPTFRAEYSNTARHASE 241

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +    +   E +++ V +   +       F                   
Sbjct: 242 FWMVEPEIAFGDLSANMELAEAMVKFVIKYVMDTCPEEMEFFNSFIEKGLFDKLNNVLNN 301

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+   +   +EH  +     F K     P +      
Sbjct: 302 DFGRVTYTEAIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYFKK-----PVFVTDYPK 356

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                  +   D     A     PG+  I 
Sbjct: 357 EIKAFYMKLNEDGKTVRAMDLLAPGIGEII 386



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P     +E K        F M           D  +++A   DL+  G  EI
Sbjct: 347 KPVFVTDYP-----KEIK-------AFYMK-------LNEDGKTVRAM--DLLAPGIGEI 385

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    E++L     +G+ K      +       + G  PH G   G +R++M L 
Sbjct: 386 IGGSQREDSYEILLNRMEELGLDK----ESYEFYLDLRRFGSFPHSGYGLGFERMMMYLT 441

Query: 552 GAKNVREVSLFPMSQN 567
           G +N+R+V  FP + N
Sbjct: 442 GMQNIRDVIPFPRTPN 457


>gi|323487320|ref|ZP_08092620.1| hypothetical protein HMPREF9474_04371 [Clostridium symbiosum
           WAL-14163]
 gi|323694241|ref|ZP_08108417.1| asparagine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323399365|gb|EGA91763.1| hypothetical protein HMPREF9474_04371 [Clostridium symbiosum
           WAL-14163]
 gi|323501714|gb|EGB17600.1| asparagine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 463

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 65/383 (16%), Positives = 126/383 (32%), Gaps = 63/383 (16%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           YR+        + +   +++ GWV  VR      F+ + D      +         +  +
Sbjct: 10  YRS------REAYLDKEIQIGGWVRSVRGSKAFGFVVVSDGSYFETLQI----VYHDTLE 59

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +      L + G  +    + +         E+ A +I I   +     P+  +R   E 
Sbjct: 60  NFSDISKLNV-GAAIIVKGKLVATPEAKQPFEIQASEILIEGPS-ASDYPLQKKRHTLEY 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R     L  R +T       R+    ++       +F+   TP++T S  EGA +    
Sbjct: 118 LR-TISHLRPRTNTFQAVFRVRSLAAYAIHQYFQEHDFVYVHTPLITGSDCEGAGEMFQV 176

Query: 184 SRVNQG--------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           + ++                 F+  P       Q      A  F   +   P FR E+  
Sbjct: 177 TTLDLNNVPKTPEGAVDFAQDFFNKPTNLTVSGQLNAETYAMAFRNVYTFGPTFRAENSN 236

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL----------- 275
           + R   EF+ ++ EM+F + +D +   E++L+ V            NF            
Sbjct: 237 TTRHAAEFWMIEPEMAFADLNDNMALAESMLKYVIRYVLEHAPEEMNFFNQFIDKGLLER 296

Query: 276 ----------RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
                      + Y +A++       +    +       TEH  +   ++F K + V   
Sbjct: 297 LNHVLNSEFGHVTYTEAVKLLEEHNDEFDYKVFWGCDLQTEHERYLTEKIFQKPVFVTDY 356

Query: 324 YEVWAIPAKGGGGNRAFCDRMNE 346
            +            +AF  +MNE
Sbjct: 357 PKEI----------KAFYMKMNE 369



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 53/139 (38%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P     +E K        F M           D  ++ A    LV    EI 
Sbjct: 349 KPVFVTDYP-----KEIK-------AFYMKMNE-------DNKTVAAMDC-LVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + ++     +G+ K      +G      + G   H G   G +R VM L G
Sbjct: 389 GGSQREDDYDKLVARMDELGLRK----EDYGFYLDLRKYGSTRHSGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R++  FP + N C+L
Sbjct: 445 VSNIRDIIPFPRTVNNCEL 463


>gi|325681187|ref|ZP_08160717.1| asparagine--tRNA ligase [Ruminococcus albus 8]
 gi|324107109|gb|EGC01395.1| asparagine--tRNA ligase [Ruminococcus albus 8]
          Length = 457

 Score =  178 bits (451), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 62/349 (17%), Positives = 120/349 (34%), Gaps = 47/349 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
               +G  V + GWV   R    + F+++ D   +  V    D A     K +       
Sbjct: 12  NKELIGQTVTVCGWVRTSRNSKNVAFVELNDGTSLKNVQVVIDKADDPDYKDIPRV---- 67

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +    + +       +I ++   I +L        P+  +    E +R     L 
Sbjct: 68  --GTSLKVEGKLVEGRNAA-EINVTPADITVLGDC-PQDYPLQKKGHTLEFLR-TMPHLR 122

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR------- 185
            R +T +  +  R+ +  ++       NFI  +TP++T S  EGA +    +        
Sbjct: 123 GRTNTFNAVMRVRSVLAQAIHSYYQDRNFIYVNTPLITGSDCEGAGEMFRVTTIGFSQDY 182

Query: 186 -----VNQGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                 +   F+          Q +  + A+   + +   P FR E+  + +   EF+ +
Sbjct: 183 KTEDDYDAADFFGRRAGLSVSGQLEGEMAATAMGKIYTFGPSFRAENSNTPKHLAEFWHV 242

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F E DD++   E++++ V             F                      R
Sbjct: 243 EPEIAFAELDDVIEVAEDMVKHVIGTVLEKCPDEIAFFDAHFEKGLKARLEELISHEFGR 302

Query: 277 ICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
           + Y +AI        +   P+       TEH  +   +VF K + V   
Sbjct: 303 VTYTEAIELLKKSGENFVYPVEWGCDLQTEHERYLSEKVFGKAVFVTDY 351



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 26/132 (19%)

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIAS 493
            ++ D+P     +E K      NP              D  ++ A   DL+  G  EI  
Sbjct: 346 VFVTDYP-----KEIKSFYMKQNP--------------DGKTVAAV--DLLVPGVGEIIG 384

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  R    + ++ A     ++     + +       + G  PHGG   G +R++M   G 
Sbjct: 385 GSEREADYDKLIAAMKERNMNL----DLYSDYLDLRKYGTVPHGGFGLGFERLIMYTTGV 440

Query: 554 KNVREVSLFPMS 565
           +N+R+V +FP +
Sbjct: 441 QNIRDVIMFPRT 452


>gi|296413417|ref|XP_002836410.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630228|emb|CAZ80601.1| unnamed protein product [Tuber melanosporum]
          Length = 552

 Score =  177 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 84/382 (21%), Positives = 148/382 (38%), Gaps = 51/382 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF------EIAKS 64
           L   D G+ V     +   R  G  + F+ +R      Q V   ++         + A  
Sbjct: 96  LTAEDDGTEVVFRARLQNARAQGAKMCFVVLRQQSDSIQAVLTVNTEGTVSKQMVKWASG 155

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----- 119
           V  E V+ + G +        +A++    +E+   K  +L+ AE +    F +       
Sbjct: 156 VNLESVVLVHGKIAKTPEPVTSASLS--DVEVQITKFFVLAEAEPMLPIQFDDASRSLKE 213

Query: 120 -------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                     + R   R +DLR  +        + +    +  ++  NF+E  TP L A+
Sbjct: 214 VEAGAATVSLATRLDNRVIDLRILSNQAIFNISSAVCTLFKEYLLKHNFVEVHTPKLIAA 273

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + EG  +       N+ ++ A  Q+PQ YKQ+L+A+ F+R F+IAP FR E+ ++ R   
Sbjct: 274 ASEGGSNVFKVHYFNRDAYLA--QSPQLYKQMLIAADFERVFEIAPVFRAENSQTHRHMT 331

Query: 233 EFYQLDMEMSFVEQ-DDILNTMENVLRGVF----EEFSNGN--------------TVSNN 273
           EF  LD+EM+F E   +++  +E +   +F    E F+                      
Sbjct: 332 EFTGLDLEMAFEEHYHEVVEVLEGLFVYIFAGLQERFAKEIAIVRAQYPVEEFKVPKDGK 391

Query: 274 FLRICYDDAIRRY---GTDKPDLRN-----PIIMHNVTEHFVHSEFRVFSK-ILSVNPGY 324
            LR+ +   I      G + PDL +        +  +       +F +  K  L+V P Y
Sbjct: 392 VLRLTFKQGIAMLREAGHEVPDLEDLSTEMERTLGRLVAEKYGEDFYILDKFPLAVRPFY 451

Query: 325 EVWAIPAKGGGGNRAFCDRMNE 346
            +          +  F  R  E
Sbjct: 452 TMPDPEDPQYSNSYDFFMRGEE 473



 Score = 97.4 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/159 (27%), Positives = 61/159 (38%), Gaps = 24/159 (15%)

Query: 410 CSFAADARNHIAQELGIINCNCF-EFCWIMD-FPFYEWNEEEKKIDFAHNPFTMPQGGME 467
                D    + + LG +    + E  +I+D FP                 +TMP     
Sbjct: 411 VPDLEDLSTEMERTLGRLVAEKYGEDFYILDKFPL-----------AVRPFYTMPDPEDP 459

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
                      +  YD    G EI SG  R H S+ + +  S++GI  E           
Sbjct: 460 QY---------SNSYDFFMRGEEILSGAQRVHNSQFLAERMSSLGIDPEA--PGLEDYVG 508

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           AF+ G PPH G   G++R+V L LG  N+R  S FP   
Sbjct: 509 AFKYGAPPHAGGGIGLERVVFLWLGLGNIRRASAFPRDP 547


>gi|317495209|ref|ZP_07953579.1| asparaginyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914631|gb|EFV36107.1| asparaginyl-tRNA synthetase [Gemella moribillum M424]
          Length = 428

 Score =  177 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 82/343 (23%), Positives = 128/343 (37%), Gaps = 36/343 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS---EWV 70
              +G  V L  W+   R  G I F  +R   G  Q +A  +S   E  + +R    E  
Sbjct: 7   KEKLGEKVTLGAWIANKRSSGKIAFFQLRYGAGFVQAIALKESLGEEKYQQLRHLPQETS 66

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + GLV     E          IEL  +  E++S A + P+     +E+        R 
Sbjct: 67  LKVTGLVKENDRELS-------GIELEIESFEVISEAIDYPITP---KEHGVEFLADNRH 116

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           + +R    H  +  R +II +       E FI+   PILT+S+PEG  +       ++ +
Sbjct: 117 IWIRSKKQHAILTIRNQIIKATYDFFEKEGFIKTDPPILTSSAPEGTTELFNTKYFDEEA 176

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F    + L
Sbjct: 177 Y--LSQSGQLYLE-ATAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEAEMAFCNHAESL 233

Query: 251 NTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAI---RRYGTDKPD 292
              E  +  +  E                         F RI Y DAI   +  G D  +
Sbjct: 234 ALQEAYVNYLLTEVLEKCQEQLKILGRDLEALNNARGEFPRIRYKDAIKLLKDNGFDDIE 293

Query: 293 LRNPIIMHNVTEHFVHSEFRVF--SKILSVNPGYEVWAIPAKG 333
             +     + T         VF     L + P Y +      G
Sbjct: 294 YGDDFGSPHETFIANSYNKPVFITHWPLDIKPFYMIEDPEEPG 336



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 53/182 (29%), Gaps = 27/182 (14%)

Query: 388 RVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-----IINCNCFEFCWIMDFPF 442
              L+   G+       D +K              + G      I  +  +  +I  +P 
Sbjct: 262 LEALNNARGEFPRIRYKDAIKLLKDNGFDDIEYGDDFGSPHETFIANSYNKPVFITHWPL 321

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
                          PF M +   E         I    Y       EI  G  R    +
Sbjct: 322 ------------DIKPFYMIEDPEEPGVVLCADLIAPEGY------GEIIGGSQRIDDYD 363

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +L+      ++     + +G      + G   H G   G++R V  + G  +VRE   F
Sbjct: 364 KLLENIKKHDLNL----DAYGWYLDLRKYGSVEHAGFGLGLERTVAWITGNGHVRETVPF 419

Query: 563 PM 564
           P 
Sbjct: 420 PR 421


>gi|301784689|ref|XP_002927769.1| PREDICTED: lysyl-tRNA synthetase-like [Ailuropoda melanoleuca]
          Length = 597

 Score =  177 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 58/276 (21%), Positives = 115/276 (41%), Gaps = 15/276 (5%)

Query: 6   THSCGDLGVSDVGS-----FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           TH   +      G       ++++G +H  R  G  +IF D+R      QV+AN  S  +
Sbjct: 106 THFIQEYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNY 163

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  +           G ++             G++ +   +I +LS      LP      
Sbjct: 164 KSEEEFIHINNKLRRGDIIGVQGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGL 220

Query: 120 YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
             +  R++ R+LDL  +   +   + R++II  +R  +    F+E  TP++        A
Sbjct: 221 KDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRTFLDELGFLEIETPMMNVIPGGAVA 280

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   
Sbjct: 281 KPFITYHNELDMNLY-MRVAPELYHKILVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTC 338

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +  M++ +  D++   E ++ G+ +  +    V+ +
Sbjct: 339 EFYMAYADYHDLMEITEKMISGMVQHITGSYKVTYH 374



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      + F     +K   ++           A +
Sbjct: 479 KEGLTERFELFIMKKEICNAYTELNDPVRQRELFEEQAKAKAAGDDEAMFIDENYCTALE 538

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDRI M L  + N++EV LFP  +
Sbjct: 539 YGLPPTAGWGMGIDRITMFLTDSNNIKEVLLFPAMK 574


>gi|254281891|ref|ZP_04956859.1| asparaginyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678094|gb|EED34443.1| asparaginyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 465

 Score =  177 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 65/372 (17%), Positives = 121/372 (32%), Gaps = 51/372 (13%)

Query: 14  VSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
              +G+ V   GW+   R    GI FL I D      +     S       +  +E +  
Sbjct: 14  PELIGTTVTAKGWLRSKRDSKAGISFLAIHDGSHFDALQ----SVVANTLTNYDTEVLPL 69

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  ++ + E + +      +E+ A ++E++   ++       ++ +          L 
Sbjct: 70  STGCAVAVTGELVASQGKGQTVEIQASQVEVIGGVDDPEAYPIAKKRHSFEYLRTQAHLR 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R +T       R     ++      E F   +TPI+TAS  EGA +    S ++  +  
Sbjct: 130 PRTNTFGAITRIRHVAAQAIHELFSREGFYWVNTPIITASDCEGAGELFRVSHLDWNNLP 189

Query: 193 ALPQAPQQYKQ-------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEFY 235
             P       Q        L  SG            + +   P FR E+  + R   EF+
Sbjct: 190 RKPDGSVDQSQDFFGDEAFLTVSGQLALESHCLAMSKVYSFGPTFRAENSHTSRHLAEFW 249

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F + +D     E +L+ V     +                      N + N F
Sbjct: 250 MVEPEIAFADLNDNAELAERLLKHVIARVLDRCEVDMAFFEQRIDDTVISRLRNILDNAF 309

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
            R+ Y +AI      K     P+            +     +            +     
Sbjct: 310 ERMTYTEAIAILERSKEQFEFPVRW--------GIDMASEHERYLAEKHVGRPVVVTDYP 361

Query: 335 GGNRAFCDRMNE 346
              +AF  R+N+
Sbjct: 362 SDIKAFYMRLND 373



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 48/150 (32%), Gaps = 28/150 (18%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +      + D+P                 F M          +D  ++ A  
Sbjct: 342 HERYLAEKHVGRPVVVTDYP------------SDIKAFYMR-------LNDDGKTVAAM- 381

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            D++  G  EI  G  R    +V+          +  +           + G  PH G  
Sbjct: 382 -DVLAPGVGEIIGGSQREDRLDVLDSRM------EPQLREDLWWYRDLRRYGSVPHAGFG 434

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R++  L G  NVR+V  FP +    D
Sbjct: 435 LGFERLLAYLTGMDNVRDVIPFPRTPGHAD 464


>gi|271970322|ref|YP_003344518.1| lysyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
 gi|270513497|gb|ACZ91775.1| lysyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
          Length = 500

 Score =  177 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 66/314 (21%), Positives = 120/314 (38%), Gaps = 28/314 (8%)

Query: 5   RTHSCGDLGVSDV--------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RT + G++             G  V ++G V   R  G + F  IRD     QV+ + D 
Sbjct: 40  RTATNGEIREKYADLAADTATGDRVGVTGRVMLSRTGGKLCFATIRDGSADLQVMISLDK 99

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E   + + +  L   G  +    E I +    G++ + A +  I S     PLP   
Sbjct: 100 VGEESLAAWKRDVDL---GDHVGIEGEVITSR--RGELSILADRWAITSKCLR-PLPEKH 153

Query: 117 EREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                   R + R+LDL  +    K    R+ ++ +MR     E ++E  TP+L      
Sbjct: 154 AGLTDPEARVRQRYLDLIVNDEARKMAYTRSAVVRAMRDFWHGEGYLEVETPMLQPIHGG 213

Query: 176 G-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F           Y L  A + Y + L+  G ++ F+I   FR+E   +   P EF
Sbjct: 214 ATARPFKTHINAYSMELY-LRIAIELYLKRLVVGGIEKVFEINRNFRNEGADATHNP-EF 271

Query: 235 YQLDMEMSFVEQDDILNTMENVLRG----------VFEEFSNGNTVSNNFLRICYDDAIR 284
             L+   ++++ +D+ +  + +++           V  E    +     + RI    ++ 
Sbjct: 272 TMLEAYGTYLDYNDMADLTQRMIQSAVVAALGHSVVTHEGQEIDLGLPEWPRITLYGSVS 331

Query: 285 RYGTDKPDLRNPII 298
               ++     P+ 
Sbjct: 332 EALGEEITTETPLE 345



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 63/200 (31%), Gaps = 32/200 (16%)

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
           G V++ L    T    +    +  D+                     I + L  +     
Sbjct: 328 GSVSEALGEEITTETPLEHVRKHADAHEIHWDPK----WGQGKLVQEIFEAL--VEHTLI 381

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++MD+P               +P T        L           ++DL+  G E+ 
Sbjct: 382 QPTFVMDYPL------------ETSPLTRQHRDNPLL---------TEKWDLIGFGTELG 420

Query: 493 SGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +            +  +   +                  A +  MPP GG+  G+DR+VM
Sbjct: 421 TAYSELVDPVEQRRRLTEQSLLAAGGDPEAMQLDEDFLTALEYAMPPTGGMGLGVDRLVM 480

Query: 549 LLLGAKNVREVSLFPMSQNF 568
              G KN+RE  LFP+ +  
Sbjct: 481 AFTG-KNIRETILFPLVKPA 499


>gi|134095413|ref|YP_001100488.1| lysyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166229807|sp|A4G778|SYK_HERAR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|133739316|emb|CAL62365.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Herminiimonas
           arsenicoxydans]
          Length = 511

 Score =  177 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 61/306 (19%), Positives = 119/306 (38%), Gaps = 28/306 (9%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYG-----ITQVVANPD 55
            +Y + +  +L    V   V L+G +   R  G    F  ++D  G       Q+    +
Sbjct: 52  EKYGSKTREELEAEPV--TVVLAGRMMLKREAGKKAAFATLQDASGSKADGRIQIYVTLN 109

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                   ++    +  I G+              T ++ +   ++ +++ +   PLP  
Sbjct: 110 LTGEAAMAALHHYDLGDILGV------SGTLFKTKTDELTIKVSELRLITKSLR-PLPDK 162

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASS 173
                 +  +++ R++DL  +   +   K RT  I+S+R  M   +F+E  TP+L T   
Sbjct: 163 FHGLADQETKYRQRYVDLIMNEDTRRTFKARTAAISSIRRFMERNDFMEVETPMLHTIPG 222

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F           + L  AP+ Y + L+  GFDR F+I   FR+E       P E
Sbjct: 223 GAAAKPFTTHHNALDMEMF-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGVSIRHNP-E 280

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIR 284
           F  ++   ++ +   +++  E V+R    +     T++           F R+    AI 
Sbjct: 281 FTMMEFYAAYTDYKWLMDFTEAVIRQAAIDAHGTATLTYGGRELDLAKPFHRLTIVGAIN 340

Query: 285 RYGTDK 290
           ++    
Sbjct: 341 KFAPQY 346



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 112/334 (33%), Gaps = 44/334 (13%)

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+E++D +     +L  +      G   +  F        +  +    P+L    ++   
Sbjct: 203 FMERNDFMEVETPMLHTI-----PGGAAAKPFTTHHNALDMEMFLRIAPELYLKRLVVGG 257

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA------RSQGQPGL 356
            +          ++ +S+    E   +       +  +     E         + G   L
Sbjct: 258 FDRVFEINRNFRNEGVSIRHNPEFTMMEFYAAYTDYKWLMDFTEAVIRQAAIDAHGTATL 317

Query: 357 AYIFWRLDESGN---VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            Y    LD +     +  +G + K       E +     ++   +     G      S  
Sbjct: 318 TYGGRELDLAKPFHRLTIVGAINKFAPQYTHEQLHDAEYIK---AELKKFGVKPHAHSGL 374

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
              +  + +E        +E  +I+D+P                            + +D
Sbjct: 375 GALQLALFEE--TAEAQLWEPTYIIDYP---------------------VEVSPLARASD 411

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
            ++    +++L   G EIA+G    + +E     F     +K+  +           RA 
Sbjct: 412 TVAGITERFELFMVGREIANGFSELNDAEDQAARFQAQVAAKDAGDEEAMYYDADYIRAL 471

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + GMPP GG   GIDR++M++  + N+R+V LFP
Sbjct: 472 EYGMPPTGGCGIGIDRLMMIITDSPNIRDVLLFP 505


>gi|258405839|ref|YP_003198581.1| asparaginyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257798066|gb|ACV69003.1| asparaginyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 463

 Score =  177 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 51/282 (18%), Positives = 103/282 (36%), Gaps = 26/282 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L  +     +++ GWV   R      FL++ D   +   QV+ + D   +   
Sbjct: 3   RTRVVQALRSTAPVDDIQIMGWVRTKRDSKQFTFLEVNDGSCLKNIQVIVDSDVPSYSEL 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + + +   + + G ++    +         + E+ A +I ++  A+    P+  +R   E
Sbjct: 63  EGINTGASVRLRGKLVESPGKG-------QKWEVQATEIALIGAADPEGYPLQKKRHSDE 115

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R     L  R +        R  +  ++        F    TPI+T S  EGA +   
Sbjct: 116 FLR-TIAQLRPRTNKYGALYRIRAELAQAIHRFFHERGFYYVHTPIITGSDCEGAGEMFQ 174

Query: 183 PSRVNQG-------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
            + ++                F+   A+     Q    ++A      +   P FR E+  
Sbjct: 175 VTSLDMNTPPRANGQVDHSQDFFGQSAMLTVSGQLSAEVLACSLGNVYTFGPTFRAENSN 234

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           + R   EF+ ++ EM+F +  D ++  E  L+ +        
Sbjct: 235 TPRHAAEFWMVEPEMAFADLKDDIDLAEAFLQYLVTHIREHC 276



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 14/117 (11%)

Query: 451 KIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
               +  PF M      E++   D+         LV    EI  G  R    EV+    +
Sbjct: 355 DYPKSIKPFYMRVNDDQETVAAMDV---------LVPRVGEIIGGSQREERLEVLEGRIA 405

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           ++G+ +E  E          + G  PH G   G +R++M L G  N+R+   FP + 
Sbjct: 406 DMGLPREEYE----WYLDLRRYGTVPHAGFGMGFERVLMFLTGVGNIRDAVPFPRTP 458


>gi|149193730|ref|ZP_01870828.1| lysyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135683|gb|EDM24161.1| lysyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 498

 Score =  177 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 136/364 (37%), Gaps = 36/364 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
              D      ++G V  +R  G   F  I D  GI QV  + +    ++           
Sbjct: 50  NKRDESRKFIVAGRVKFLRLMGKAAFFKIEDESGILQVYMSKN----DLGDKFNLLKKTL 105

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G ++            TG++ + A  + IL+ A   PLP           +++ R+LD
Sbjct: 106 EVGDIVEVIGYPFVTK--TGELSIHADDVRILTKA-IHPLPEKFHGLQDVETKYRQRYLD 162

Query: 133 LRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGS 190
           +  +   ++  K R++I++ +R   + + F+E  TP+L T      AR F+         
Sbjct: 163 MIMNKDTRDRFKLRSQIVSLVREFFLKKGFLEVETPMLHTVVGGANARPFMTHHNALDID 222

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  AP+ + + L+  GF+  F++   FR+E       P EF  ++   ++   +D++
Sbjct: 223 M-NLRIAPELFLKRLIVGGFEAVFELNRNFRNEGIDHTHNP-EFTMIEFYWAYHTMEDLM 280

Query: 251 NTMENVLRGVFE--------EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH-- 300
              + +   +FE        E+ +     +++  I Y DA+ + G    ++   +     
Sbjct: 281 KLTKELFDFLFEKLNLPKKLEYGDMVIDFDDWRTITYKDALIKIGNIPEEILEDVEAMKK 340

Query: 301 -------NVTEHFVHSE------FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
                   + EH           F  F +   +NP +             R   D+  E+
Sbjct: 341 YLKDAGIEIEEHIDSKGKLWAELFDEFVEDKLINPTFITEFPIEISPLARR--SDKNPEF 398

Query: 348 ARSQ 351
           A   
Sbjct: 399 AERF 402


>gi|242310600|ref|ZP_04809755.1| lysyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239522998|gb|EEQ62864.1| lysyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 497

 Score =  177 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 113/262 (43%), Gaps = 15/262 (5%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLCIDGLVMSR 80
           ++G +  VR  G   FL I D+ GI Q+  + +     FEI K       + +       
Sbjct: 63  VAGRIKFVRLMGKAAFLKIEDNSGILQIYLSKNELGENFEIFKKYIEVGDIIV------- 115

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
            A+       TG++ L A + ++L+ A   PLP          +R++ R+LDL  +   +
Sbjct: 116 -AKGFPFVTKTGELSLHALEFKLLTKAIS-PLPEKYHGLVDIEMRYRQRYLDLIMNKEVR 173

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           +  V R++I++ +R       F+E  TP++        A+ F+          Y L  AP
Sbjct: 174 DTFVLRSKIVSCVRRFFEENGFLEVETPMMHPIPGGANAKPFVTFHNALNVERY-LRIAP 232

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF+  F+I   FR+E       P EF  ++   ++ +  D++   + +  
Sbjct: 233 ELYLKRLVVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYKDYKDLIKITKALFD 291

Query: 259 GVFEEFSNGNTVSNNFLRICYD 280
            +F + +    +  N   I + 
Sbjct: 292 YLFAQLNLPKILKFNEKEIDFS 313



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 71/219 (32%), Gaps = 34/219 (15%)

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           Y+F +L+    +                 +   +++           D L     A + +
Sbjct: 292 YLFAQLNLPKILKFNEKEIDFSEFREISYLDSLVEIGGIPREVATDRDKLYDYLIANNVK 351

Query: 418 NHIAQELGIINCNCF---------EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                ELG +    F            +I DFP               +P          
Sbjct: 352 LESKMELGKLQSEAFDAFVEDKLINPTFITDFP------------IVISPLARRNDENPE 399

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG---- 524
           +         A +++L   G EIA+G    +      + F    I+KE  +         
Sbjct: 400 I---------ADRFELFIGGSEIANGFSELNDPLDQYERFKEQVIAKEAGDEEAQYMDED 450

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              A   GMPP  G   GIDR+VMLL G   +++V LFP
Sbjct: 451 YITALSYGMPPTAGEGIGIDRLVMLLTGHNIIKDVILFP 489


>gi|218295031|ref|ZP_03495867.1| asparaginyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244234|gb|EED10759.1| asparaginyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 438

 Score =  177 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 99/264 (37%), Gaps = 14/264 (5%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLC 72
             G  V L GWV+  R  G I FL +RD  G  Q          E+   A  +  E  L 
Sbjct: 11  HEGQEVELRGWVYGKRSKGKIHFLILRDGTGFLQATVVKGEVPEEVFQRADHLPQETALK 70

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GLV              G  EL+ + +E++S+         G +E+       +R L 
Sbjct: 71  VWGLVRKDER-------APGGYELAVRNLEVVSL--PQGEYPIGPKEHGIDFLMDHRHLW 121

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       +  R  +   +        F+    PILT S+ EG  D      +  G   
Sbjct: 122 LRHRRPFAVMRIRDELERGIHEFFGERGFLRFDAPILTPSAVEGTTDLFEVG-LFDGEKA 180

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y     A  + + +   P FR E  ++ R   EF+ ++ E++F+  ++ +  
Sbjct: 181 YLSQSGQLY-AEAGAMAYAKVYTFGPTFRAERSKTRRHLLEFWMVEPEVAFMTHEENMAL 239

Query: 253 MENVLRGVFEEFSNGNTVSNNFLR 276
            E ++R +              L 
Sbjct: 240 QEELVRYLVGRVLERRARELEMLE 263



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 14/117 (11%)

Query: 451 KIDFAHNPFTMPQG--GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           +       F M       E +  +DLL+ + +         EI  G  R H  E++ +  
Sbjct: 328 RYPARIKAFYMEPDPEDPELVLNDDLLAPEGYG--------EIIGGSQRIHDLELLRRKI 379

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
              G+     E  +       + G  PH G   G++R V  + G  +VRE   FP  
Sbjct: 380 REFGLP----EEVYEWYLDLRRFGSVPHSGFGLGLERTVAWICGLSHVREAIPFPRM 432


>gi|257784175|ref|YP_003179392.1| asparaginyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472682|gb|ACV50801.1| asparaginyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 467

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 67/349 (19%), Positives = 112/349 (32%), Gaps = 49/349 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V  +GWV  VR      F+ + D      +    +       + V S  V    G  
Sbjct: 18  GQKVTAAGWVRSVRDMKNFGFVTLNDGSCFKDLQVVMNRENLSNYEEVASCGV----GAA 73

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +               IEL AQ I I   +     P+  +R+  E +R +   L  R + 
Sbjct: 74  LIIEGVLELTPDRPQPIELQAQTIVIEGPSSPDY-PMQKKRQSLEYLRTQQ-HLRPRTNM 131

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-------- 189
                  R+    ++        F+  +TPI+TAS  EGA +    + ++          
Sbjct: 132 FRAVFRIRSVAAFAIHQFFQDRGFVYVNTPIITASDAEGAGEMFRVTTLDLNNVPRTEKG 191

Query: 190 ------SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  F+          Q +    A  F   +   P FR E+  + R   EF+ ++ E
Sbjct: 192 DVDYSKDFFGQSSHLTVSGQLQAENFAMAFGDVYTFGPTFRAENSNTRRHAAEFWMIEPE 251

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRICY 279
           M+F +    ++  E +LR V                                + F R+ Y
Sbjct: 252 MAFCDLAQDMDVAEEMLRYVIAYVLEHCPDELEMLNKFVDKGLLERLNHVANSQFSRVSY 311

Query: 280 DDAIRRYGTDK---PDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
            +AI               P+   +   TEH  +   + F K + V   
Sbjct: 312 TEAIEILQEAVKAGQKFEYPVEWGIDLQTEHERYLTEQHFGKPIFVTDY 360



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 24/149 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P             A   F M        + ND     A  
Sbjct: 342 HERYLTEQHFGKPIFVTDYP------------AAIKAFYM--------RLNDDGKTVAAA 381

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    E++ +    +G++ +  +          + G   H G   
Sbjct: 382 DCLVPGIGEIIGGSQREDRLELLEKRIVELGMNPDDYK----YYLDLRRYGSCTHSGFGL 437

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G +R+VM L G  N+R+V   P +    D
Sbjct: 438 GFERLVMYLTGVDNIRDVIPHPRTVGNAD 466


>gi|296473717|gb|DAA15832.1| asparaginyl-tRNA synthetase [Bos taurus]
          Length = 559

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 68/344 (19%), Positives = 127/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  +++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + + G+
Sbjct: 136 GQRIKVFGWVHRLRRQGKNLMFLVLRDGTGFLQCVLSDDLCQCYNGVVLSTESSVAVYGM 195

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 196 LNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 251

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ I    R       + E + P L  +  EG           + ++  L Q
Sbjct: 252 NMSKILKARSVITRCFRDHFFDRGYHEITPPTLVQTQVEGGATLFKLDYFGEEAY--LTQ 309

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  +++LN +E++
Sbjct: 310 SSQLYLETCIP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFEELLNRLEDL 368

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 369 VCDVVDRVLKSPAGNIVRDLNPNFKPPKRPFKRMNYSDAIVWLKEHNIKKEDG-TFYEFG 427

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 428 EDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDPRLTE 471



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   +E +L  +   GI        +       + G  PHGG   G+
Sbjct: 476 LMPNVGEIVGGSMRIWDNEEILAGYKREGIDPTP----YYWYTDQRKYGTCPHGGYGLGL 531

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R +  +L   ++R+V L+P     C  
Sbjct: 532 ERFLTWILDRYHIRDVCLYPRFVQRCKP 559


>gi|88803560|ref|ZP_01119085.1| lysyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88780572|gb|EAR11752.1| lysyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 564

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 65/340 (19%), Positives = 126/340 (37%), Gaps = 32/340 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS--EWVLCIDG 75
           G  V ++G +  +   G   F  ++D  G  QV  N D  C    KS+ +     L   G
Sbjct: 46  GKQVTIAGRLMAINIQGKASFAQLQDGEGRIQVYFNRDEICLGEDKSLYNEVFKKLLDLG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GEREYPESIRFKYR 129
             +  +       +  G+  +  ++ ++LS A +             +      +R++ R
Sbjct: 106 DFLGITGTLFTTQV--GEKTVMVKEFKLLSKALKPLPMPKIKDGVTFDAFTDPEMRYRQR 163

Query: 130 FLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           + DL  +   K   +KRT++ N+MR       + E  TP+L        AR F+      
Sbjct: 164 YADLVVNPHVKEVFIKRTKLFNAMRSFFNDAGYFEVETPVLQPIPGGAAARPFITHHNSL 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +S+ + +
Sbjct: 224 DIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVSYKDYN 281

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTE 304
            +++  E +L       +  +  +              +G  K D + P   I M +  +
Sbjct: 282 WMMDFAEQLLEHCAIAVNGTSEAT--------------FGEHKIDFKAPYARITMADSIK 327

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           HF   +         +    +   I      G     D +
Sbjct: 328 HFTGFDITG-KTEDEIRAAAQSMHIEVNATMGKGKLIDEI 366



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 5/123 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 372 EGNYIQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSELNDPIDQRERF 431

Query: 509 SNVGISKEVVENRF-----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                  +  ++           RA + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 432 EQQLKLAQKGDDEATEFIDEDFLRALEYGMPPTSGMGIGMDRLIMFLTNNQSIQEVLFFP 491

Query: 564 MSQ 566
             +
Sbjct: 492 QMR 494


>gi|297171664|gb|ADI22658.1| lysyl-tRNA synthetase (class II) [uncultured Gemmatimonadales
           bacterium HF0500_22O06]
          Length = 508

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 68/310 (21%), Positives = 114/310 (36%), Gaps = 30/310 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L     G    ++G +   R HG   F  I D  G  QV    D    E  + +    + 
Sbjct: 52  LAEGGEGERSSVAGRILSWRDHGKSHFAHIGDAGGSIQVYFKSDIIGDECFEELSLLDLG 111

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY----------- 120
              G+      E       TG+I + A+   +L+ +         E              
Sbjct: 112 DWIGV------EGRAFRTRTGEITIRAESYTLLTKSLRPLPFGKTEENTETGERIEHSGF 165

Query: 121 -PESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                R++ R+ DL     L      RT+II ++R  + +ENF+E  TP+L       + 
Sbjct: 166 SDPETRYRQRYADLAVHPALRNVFETRTKIIRALRGFLDSENFLEVETPVLQPLYGGASA 225

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
              V      G    L  A + Y + L+  G DR ++I+  FR+E       P EF  L+
Sbjct: 226 KPFVTHHEALGLTMYLRIADELYLKRLLVGGLDRVYEISKDFRNEGLSRVHNP-EFTMLE 284

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEF---------SNGNTVSNNFLRICYDDAIRR-YGT 288
              +F + +D +  +E ++  V +E          +   +    F RI    A+    G 
Sbjct: 285 WYQAFTDYNDQMVLVERMVGHVLDEVVSSRELRYGNEMFSFEPPFPRIPLVGALSEALGV 344

Query: 289 DKPDLRNPII 298
           D   L + ++
Sbjct: 345 DVFHLEDEVL 354



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 62/192 (32%), Gaps = 43/192 (22%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG--IINCNCFEFC 435
           HL           L + D D+                  R  +  +L   ++  +  +  
Sbjct: 348 HLEDEVLREKAKALGLDDLDTAG----------------RGKLIDKLFGALVEPDLVQPT 391

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           +++D                 +P  +     E    +        +++L     E+ +G 
Sbjct: 392 FVID-----------------HPKELSPLAKEHRSDS----RLTERFELYVGRVELCNGF 430

Query: 496 IRNHMSEVMLQAFSNV----GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
              +        F           +  +       RA + GMPP GG+  G+DR VM++ 
Sbjct: 431 SELNDPLDQRARFEAQAGLRDAGDDEAQQIDDDYVRALEYGMPPTGGVGLGVDRFVMMIT 490

Query: 552 GAKNVREVSLFP 563
              ++R+V LFP
Sbjct: 491 DQPSIRDVILFP 502


>gi|269102882|ref|ZP_06155579.1| asparaginyl-tRNA synthetase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268162780|gb|EEZ41276.1| asparaginyl-tRNA synthetase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 466

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 66/362 (18%), Positives = 120/362 (33%), Gaps = 37/362 (10%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A           + +SE +    G
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFNPIQA----VVPNELNNYQSEVLKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPAQGQDFELAATDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   S P++TAS  EGA +    S ++        
Sbjct: 132 NVIGAVARVRNCLAQAIHRFYHEQGFFWMSAPLITASDCEGAGEMFRVSTLDLANLPMTD 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 KGDVDFDKDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTDKPDLRNP 296
            E++F E DD+    E++L+ VF+           F   RI  D   R       D    
Sbjct: 252 PEVAFAELDDVAKLAEDMLKFVFKAVLEERRDDLEFFAQRIDKDAITRLEQFVSSDFAQ- 310

Query: 297 IIMHNVTEHFVHSEFRVFSKI------------LSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           +   +  +    S  +    +                  ++   I        +AF  RM
Sbjct: 311 VDYTDAIKILQDSGRKFEFDVEWGIDMSSEHERFLAEEHFKAPVIVKNYPKDIKAFYMRM 370

Query: 345 NE 346
           NE
Sbjct: 371 NE 372


>gi|28898667|ref|NP_798272.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839735|ref|ZP_01992402.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|260364898|ref|ZP_05777469.1| asparagine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260879702|ref|ZP_05892057.1| asparagine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260898825|ref|ZP_05907266.1| asparagine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260900795|ref|ZP_05909190.1| asparagine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|31340435|sp|Q87NH5|SYN_VIBPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|28806885|dbj|BAC60156.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746747|gb|EDM57735.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|308086657|gb|EFO36352.1| asparagine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308093426|gb|EFO43121.1| asparagine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308106846|gb|EFO44386.1| asparagine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308111577|gb|EFO49117.1| asparagine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328474766|gb|EGF45571.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 466

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 68/384 (17%), Positives = 125/384 (32%), Gaps = 48/384 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNN----LNNYDNEVLKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPAQGQDFELAATDVKVVGWVEDAETYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++        
Sbjct: 132 NVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 191

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 AGKVDYNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F E DD+    E++L+ VF+                            VS++F ++
Sbjct: 252 PEVAFAELDDVAKLAEDMLKYVFKAVLEERRDDLEFFAQRIDKQAITRLEQFVSSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y DAI+       +   P+         + SE   F           V   P       
Sbjct: 312 DYTDAIQILLDSGREFEFPVEWG----IDMSSEHERFLAEEHFKAPVIVKNYPKDIKAFY 367

Query: 338 RAFCDR-MNEWARSQGQPGLAYIF 360
               D      A     PG+  I 
Sbjct: 368 MRMNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 6/99 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+      +GI                +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDARMREMGIDP----EHMSWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 426 YGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|332295595|ref|YP_004437518.1| Lysyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178698|gb|AEE14387.1| Lysyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 500

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 11/272 (4%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
              + G +   R HG + F DI D  G  Q+    D    E     ++   +   G  + 
Sbjct: 65  ETTVVGRLFSKRLHGKMSFADIIDFTGKIQIQLKKDILG-EQYDFFKNYIDI---GDFIQ 120

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
            S         TG+I +  + I+ILS A    LP          +R+++R+LDL  +   
Sbjct: 121 VSGNLFRTK--TGEITVLVKTIKILSKALR-ALPEKWHGLKNVELRYRFRYLDLISNPKT 177

Query: 140 K-NIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQA 197
           +   VKR++II+ +R       F+E  TP+L        A+ F+    V + + + L  A
Sbjct: 178 RDIFVKRSKIISFIRKFFEERGFLEVETPMLHIIPGGASAKPFVTYHNVLEKNLF-LRIA 236

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+   F + F+I   FR+E       P EF  L+   ++ + +D+++  E +L
Sbjct: 237 PELYLKRLLIGNFHKIFEINRSFRNEGVSVKHNP-EFTMLEAYQAYSDLNDMMSLAEELL 295

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             + +       +        +   +RR   D
Sbjct: 296 FYLCQNVLGTTDIVYQGKTYSFKPPLRRLDFD 327



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 57/156 (36%), Gaps = 29/156 (18%)

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               +  I +   I+     E  +++ +P                        +  L   
Sbjct: 364 LGKLKLEIFEH--IVEKKIEEPTFVVGYP----------------------AEVSPLAKK 399

Query: 473 DLL-SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYR 527
           D L   KA +++L+  G EI +     +        F      KE  +            
Sbjct: 400 DPLNPEKAHRFELIVAGREIGNAHSELNDPIYQKNMFLEQAKLKESGDEEAQSMDEDFIF 459

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + GMPP GG+  GIDRIVMLL  + ++R+V  FP
Sbjct: 460 ALEHGMPPAGGLGLGIDRIVMLLTDSPSIRDVIFFP 495


>gi|254389997|ref|ZP_05005219.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294813913|ref|ZP_06772556.1| Aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326442327|ref|ZP_08217061.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197703706|gb|EDY49518.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294326512|gb|EFG08155.1| Aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 436

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 77/336 (22%), Positives = 145/336 (43%), Gaps = 35/336 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M   R H   DL    +G  V + GWV+ +R    + F+ +RD  G+ QV    D+   E
Sbjct: 1   MIHSRVH-VSDLR-EHIGRTVSVCGWVNTLRLQSTMQFVVVRDGTGMVQVTHRRDNGPLE 58

Query: 61  I-AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              +S+  E  + + G V+        A +  G +E+  + +EIL+ A         +  
Sbjct: 59  ARLESLTPESAVRVTGRVVDA------AQVKLGGLEIVPEAVEILNPAATPLPI---DEH 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                R  +RFLD+RR    + +   +T +   MR    A+   E  TP L  ++ E   
Sbjct: 110 TGLEQRLDWRFLDVRRRPATQLMFAVQTTLEQGMREYAYAQGATEMHTPKLMGTASESGA 169

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +       ++ ++ A  Q+PQ YKQ+ +++G D+ F+I P FR E   + R   EF  +D
Sbjct: 170 EVFKLGYFDRSAYLA--QSPQFYKQMAISAGIDKVFEIGPVFRAEPSFTSRHATEFTGVD 227

Query: 239 MEMSFVE-QDDILNTMENVLRGVFEEFSNGN-------------TVSNNFLRICYDDAIR 284
           +E+++++  +D++   E +L     + ++ +               +  F RI   +A +
Sbjct: 228 VELAWIDGVEDVMAFEERMLAHAIAKVADAHGEAIAERFGVEVTVPTTPFPRITMAEAQK 287

Query: 285 RY---GTDKPDLRNPII---MHNVTEHFVHSEFRVF 314
                G D   ++  +      +++ H   +    F
Sbjct: 288 ILREGGWDPEGIKEDLDPEGERSISAHIKEATGHEF 323



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 24/135 (17%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           I      EF +I  +P                PF   +         D     +  +DL+
Sbjct: 315 IKEATGHEFVFITHYP------------VGIRPFYHMRPAD------DPGVTLS--FDLL 354

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
             G E+ +G  R H  +V+L+  +  G+S E + +       AF+ G PPHGG+  G+ R
Sbjct: 355 WKGLEVTTGAQREHRYDVLLKQAAEKGMSPEPLRD----YLNAFRYGCPPHGGLGMGLGR 410

Query: 546 IVMLLLGAKNVREVS 560
           ++M++LG  ++RE S
Sbjct: 411 VLMVMLGLDSIREAS 425


>gi|42526492|ref|NP_971590.1| asparaginyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|59798569|sp|Q73P19|SYN_TREDE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|41816685|gb|AAS11471.1| asparaginyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 473

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 80/470 (17%), Positives = 150/470 (31%), Gaps = 66/470 (14%)

Query: 7   HSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           H   D L     G  + + GWV   R    ++F++I D      + A  D     +  + 
Sbjct: 3   HLIKDILTSEPKGQAIDVYGWVRTKRETKNLVFIEINDGSCFASIQATFDRDT-GLDNNT 61

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +       G+ +  S   + +     ++EL A  I I   A++   P+  +R   E +R
Sbjct: 62  EALLKKAGTGVSVKVSGNLVPSPAAGQRVELQANNIHIFGDADQEKYPLQKKRHSMEFLR 121

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
                L  R +T       R+++  ++        F    TPI+T S  EGA +    + 
Sbjct: 122 -DIAHLRARTNTFGAVARIRSQMAYAIHTFFQERGFQYVHTPIITGSDCEGAGEMFHVTT 180

Query: 186 VNQG----------------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCF 220
            +                         F+   A      Q +    A+   R +   P F
Sbjct: 181 FDIEETVKKALKEKKDPDSFKIDYSQDFFGKQANLTVSGQLEGETYATALSRIYTFGPTF 240

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSN---- 266
           R E+  + R   EF+ ++ EMSF    + +   E  +  + +          EF +    
Sbjct: 241 RAENSNTSRHLAEFWMVEPEMSFFTIKENMELAEEFIVYLLKWALEKCKEDLEFFDSRIK 300

Query: 267 -------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
                   N V+  F R+ Y +AI                    + +   + +   +   
Sbjct: 301 KGLIEMLKNVVNTPFTRLTYTEAIAELEKHIDRFEF--------KPYWGCDLQSEHERFL 352

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ-----PGLAYIFWRLDESGNVAGMGP 374
               Y+   I        ++F  ++NE  ++        PGL  I    +   N+  +  
Sbjct: 353 TEEVYKGPVIVTNYPKEIKSFYMKLNEDGKTVRAMDVLVPGLGEIIGGSEREENLDILQG 412

Query: 375 VAKHLNIVNTEAIR----VRLDMQDGDSCFFIAGDPLKFCSFAADARNHI 420
             K L +   +        R                L + +   + R+ I
Sbjct: 413 RIKELGLREEDYWWYLDLRRYGTVPHSGFGLGFERLLLYVTGMGNIRDVI 462



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 56/151 (37%), Gaps = 8/151 (5%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL---KGNDLLS 476
           IA+    I+   F+  W  D          +++       T     ++S       D  +
Sbjct: 324 IAELEKHIDRFEFKPYWGCDLQSEHERFLTEEVYKGPVIVTNYPKEIKSFYMKLNEDGKT 383

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           ++A    LV    EI  G  R    +++      +G+     E  +       + G  PH
Sbjct: 384 VRAMDV-LVPGLGEIIGGSEREENLDILQGRIKELGLR----EEDYWWYLDLRRYGTVPH 438

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R+++ + G  N+R+V  FP +  
Sbjct: 439 SGFGLGFERLLLYVTGMGNIRDVIPFPRAPK 469


>gi|194246497|ref|YP_002004136.1| Lysyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|193806854|emb|CAP18283.1| Lysyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 497

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 58/287 (20%), Positives = 115/287 (40%), Gaps = 9/287 (3%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L +      V ++G +   R  G   FL ++D++   Q+    D    +  +  ++  + 
Sbjct: 50  LDLVKKNEQVTIAGRIILKREQGKAGFLHLQDYHYKIQIYIKLDLIGDKAFELYKNSDLG 109

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G+        I     T ++ + A     L+ A  LPLP   +    + I  K R++
Sbjct: 110 DIIGI------SGILFKTKTNELTIKANDFIHLTKAL-LPLPDKYKGLKNKEIIRKRRYI 162

Query: 132 DLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL  +    +    R++II ++R     +NF+E  TP L +          V    +  S
Sbjct: 163 DLIMNSKTREIFFLRSQIIKNIRNFFDNKNFLEVETPTLQSILGGATAKPFVTYHNDLES 222

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L  A +   + L+  G +  ++I   FR+E   +   P EF  L++ ++F +  D++
Sbjct: 223 NFYLRIATELSLKKLIVGGLEAVYEIGKVFRNEGIDASHNP-EFTSLEIYLAFADMRDMM 281

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           N  +  L+ V ++             I ++     +  D    +  I
Sbjct: 282 NLTKQCLKDVCKKTLKTLEFKYQNHIINFNKFEEIHILDAIKQKTGI 328



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 6/129 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           EK++      +  P       K N        +++L   G E A+     +      + F
Sbjct: 369 EKELIQPTFIYGHPIEISPLAKTNQKDKRLTDRFELFIVGKEFANAFSELNDPIEQEKRF 428

Query: 509 SNVGISK----EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP- 563
            N    K    +           A + GMPP GG+  GIDR+VMLL    N+ +V LFP 
Sbjct: 429 LNQLEQKKLGNQEANEMDLDFIEALEYGMPPTGGMGLGIDRLVMLLTNVDNINDVILFPH 488

Query: 564 -MSQNFCDL 571
             +Q   D+
Sbjct: 489 FKNQKKEDV 497


>gi|254166551|ref|ZP_04873405.1| asparaginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596521|ref|YP_003483217.1| asparaginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624161|gb|EDY36722.1| asparaginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534308|gb|ADD08655.1| asparaginyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 430

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 17/272 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H    L  + +G  V L GW++R R  G IIF+ +RD   I Q V        E  K + 
Sbjct: 4   HISEVLSDNFIGKEVALRGWIYRKRRMGKIIFVVLRDSSDIIQCVIEKKKIGNEKFKELD 63

Query: 67  S---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               E  L I+G++             TG  E+  + I I+  +   P+     ++  + 
Sbjct: 64  KVGVESSLEINGVIRKEE------RAPTG-YEVDVKDINIIGPSYLFPIT----KDKSDE 112

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
                R L LR   ++  +  R  +  ++        + E   PI    + EG       
Sbjct: 113 FLLDNRHLWLRSREMNAILKIRHTVFGAIHEFFRENGYYEVQGPIFVTGAVEGGSTLFEV 172

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++  L Q+ Q Y +  + S  +R + IAP FR E  R+ R   E++  + E+++
Sbjct: 173 PYFGKKAY--LSQSAQFYLETFIFS-LERVYTIAPSFRAEKSRTRRHLTEYWHAEGEVAW 229

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
              +D++   E ++  + ++          FL
Sbjct: 230 YHNEDMMRDEEELIMHIVQKVLEEREKELKFL 261



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R +  +V+L+     G++       +       + G  PH G   G+DR+V  L G  ++
Sbjct: 360 RIYKLDVLLRRMEEEGLNP----EDYYWYVDLRKYGSIPHSGFGLGVDRLVWWLAGLSHI 415

Query: 557 REVSLFPMSQNFCDL 571
           +    +P +      
Sbjct: 416 KYAIPYPRTIRRTKP 430


>gi|149642573|ref|NP_001092337.1| probable asparaginyl-tRNA synthetase, mitochondrial [Bos taurus]
 gi|148743934|gb|AAI42046.1| NARS2 protein [Bos taurus]
          Length = 477

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 116/266 (43%), Gaps = 19/266 (7%)

Query: 10  GDLGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           G LGV    G  V++ GW+  +R    ++FL + D   +  +    DS+    ++ +   
Sbjct: 32  GALGVQSANGERVKVQGWIRSIRSQKEVLFLHVNDGSSLESLQVVADSSF--DSRELAFG 89

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G ++   ++  N       +EL A+KIE++   +    P   +  +P     +Y
Sbjct: 90  SSVEVQGQLVKSPSKKQN-------VELKAEKIEVVGSCDAKAFPFKYKERHPLEYLRQY 142

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS---- 184
             L  R + L   +  R+    ++        F+   TP++T++  EGA +         
Sbjct: 143 PHLRCRTNVLGSVLRVRSEATAAIHSFFKDSGFVHIHTPVITSNDCEGAGELFQVEPSSK 202

Query: 185 -RVNQGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +V + +F+ +P       Q    +M+  F + F   P FR E+ +S R   EFY ++ E
Sbjct: 203 IKVPEENFFNIPVFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAE 262

Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFS 265
           +SF+E   D++  ME++ +       
Sbjct: 263 ISFLESLQDLMQVMESLFKTTAMTVL 288



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 56/156 (35%), Gaps = 25/156 (16%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
            A  H   E  ++        +++++P                PF M             
Sbjct: 344 GADLHTEHEKYLVKHCGDIPVFVINYPL------------VLKPFYMRDNED------GP 385

Query: 475 LSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
               A   DL+  G  E+  G +R     ++ Q  + +G+++      +       + G 
Sbjct: 386 QHTVA-AVDLLVPGVGELFGGSLREERYHLLEQRLARLGLTEA-----YQWYLDLRRFGS 439

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            PHGG   G +R +  +LG  N+++V  FP   + C
Sbjct: 440 VPHGGFGMGFERYLQCILGIDNIKDVIPFPRFTHSC 475


>gi|309792629|ref|ZP_07687090.1| lysyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308225351|gb|EFO79118.1| lysyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 489

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/295 (21%), Positives = 113/295 (38%), Gaps = 27/295 (9%)

Query: 22  RLSGW-VHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA----KSVRSEWVLCIDGL 76
            L+G  V   R  G I F  I D     Q+  +      E        + +  ++ + G+
Sbjct: 53  TLAGRIVGARRVMGKIAFAHIEDGSAGIQLWISRAEVGDEAFLRFRDDLDTFDIVEVAGV 112

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G+  +  + I IL+     P P           R + R+LDL  +
Sbjct: 113 LRLTQK---------GERSIFVRSITILAKT-INPPPEKWAGLSDVEERHRQRYLDLIVN 162

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +  ++I + R R I++MR  + A  F+E  TP+L       A           G    L 
Sbjct: 163 SERRDIFRARARTISTMRSVLDARGFVEVETPVLQPIYGGAAARPFTTYHNQLGQNLYLR 222

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + Y + L+  GF   ++I+  FR+E       P EF  ++   +F +  D+++ +E 
Sbjct: 223 IATELYLKRLIVGGFPGVYEISKNFRNEGVDRSHNP-EFTMMECYQAFADYRDVMDLVEV 281

Query: 256 VLRGVFEEFSNGNTVSNN---------FLRICYDDAI-RRYGTDKPDLRNPIIMH 300
           +LR +    + G  V            + RI    AI  + G D   +    ++H
Sbjct: 282 MLREIALAVTGGTLVPYQGQQLDFGRPWPRISMAQAILEQTGIDIAQIHEIDVLH 336



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 38/103 (36%), Gaps = 4/103 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGL 525
           K          +++    G EI +     +      Q F +         +         
Sbjct: 386 KRKPEQPAFTERFEAFIVGMEIGNAFSELNDPFDQEQRFLDQLKDFAAGDDEAHQMDADY 445

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             A   GMPP GG+  GIDR+VM+L     +REV LFP  +  
Sbjct: 446 VNALMYGMPPTGGLGIGIDRLVMVLTDQPTIREVILFPHMRQR 488


>gi|330833993|ref|YP_004408721.1| lysyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566132|gb|AEB94237.1| lysyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 493

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 58/272 (21%), Positives = 109/272 (40%), Gaps = 23/272 (8%)

Query: 6   THSCGDLGV-----SDVGSF-----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH+   L       +D         V+ +G V  +R HG   F+DI D     Q+    +
Sbjct: 29  THTITQLRKISNQRTDKPKEPFLFGVKTAGRVANLRRHGKASFIDIFDDGERLQLYLRVN 88

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E  K     + +   G ++    +        G++ L  +  ++L+ +   P    
Sbjct: 89  ELGTEYEK----FFKVIDRGDIIGVEGDLFFT--AKGELTLLVRSFQLLAKSLIEPPDW- 141

Query: 116 GEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
              +     R+ +R++D L  D     +  R +II  +R  +  + FIE  TPIL     
Sbjct: 142 --SQMSPEFRYSHRYVDFLYNDKARSAMELRFKIIREIRSFLAEQGFIEVETPILQPVYG 199

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F          +Y L  + + Y +  +  GFD+ F+I   FR+ED      P E
Sbjct: 200 GALAKPFKSHVNYLDEDWY-LRISLELYLKRFIVGGFDKVFEIGKVFRNEDIDVTHNP-E 257

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           F  +++  ++ + +DI++    +   + E+  
Sbjct: 258 FTLMELYWAYADYNDIMDLTRRLFSHLAEKVL 289



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 74/213 (34%), Gaps = 28/213 (13%)

Query: 359 IFWRLDESGNVAGMGPVAK-HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           + +++ E+     +    K  L    +EA+   ++    D    +          +   R
Sbjct: 294 LQYKVGENTVEIDLSNFRKISLYDSLSEALGKNVETISDDELKHLMETNGLTPRGSLYLR 353

Query: 418 NHIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
             + ++L   ++  N  +  ++ D+P      E   +   H                   
Sbjct: 354 GLMIEKLFDKLVTPNIIQPTFVTDYPI-----ETTPLCKPHR----------------SK 392

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN----VGISKEVVENRFGGLYRAFQC 531
                +++L   G E A+     +   +  + F      +    +           A   
Sbjct: 393 PGLVERFELYIAGVEFANAYTELNDPVLQDKLFKEEQDMMKRGDQEAHPYDKDFINALSY 452

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           GMPP GG+  GIDR+VML    ++++EV  FPM
Sbjct: 453 GMPPTGGLGIGIDRVVMLFTNNQSIKEVIPFPM 485


>gi|258627615|ref|ZP_05722392.1| asparaginyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258580197|gb|EEW05169.1| asparaginyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 477

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 123/385 (31%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 27  VDSEVTVRGWVRTRRDSKAGISFLAIYDGSCFNPIQAVVPNN----LNNYDNEVLKLTTG 82

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  +   + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 83  CSVEVTGTIVESPASGQAFELAATAVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 142

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++  +     
Sbjct: 143 NVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 202

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                Y Q                    A    + +   P FR E+  + R   EF+ ++
Sbjct: 203 AGKVDYNQDFFGKETFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 262

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + + +    E++L+ VF+                            V ++F ++
Sbjct: 263 PEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARLEKFVDSDFAQV 322

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI            P+   +   +EH        F   + V    +          
Sbjct: 323 DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHFKAPVIVKNYPKDI-----KAF 377

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 378 YMRMNEDGKTVAAMDVLAPGIGEII 402



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 39/113 (34%), Gaps = 14/113 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M           D  ++ A   D++  G  EI  G  R    +V+       GI   
Sbjct: 376 AFYMRMNE-------DGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMREFGIDP- 425

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                        + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 426 ---EHMDWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 475


>gi|110801719|ref|YP_699756.1| asparaginyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|122956479|sp|Q0SQ51|SYN_CLOPS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|110682220|gb|ABG85590.1| asparaginyl-tRNA synthetase [Clostridium perfringens SM101]
          Length = 465

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/377 (16%), Positives = 129/377 (34%), Gaps = 62/377 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEW 69
                   V++SGW+  +R      F+++ D      V    DS   + ++    +    
Sbjct: 14  TSEYSDKKVKISGWIRTLRASNAFGFIEVNDGSFFKNVQVVFDSAKISNYKEISKLPISS 73

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G ++                E+ A++I +  +++    P+  +R   E +R    
Sbjct: 74  SISVIGTLVETPDSKQP-------FEIQAEEIIVEGMSDSDY-PLQKKRHTFEYLR-TIA 124

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L  R +        R+    ++      + F+   TPILT S  EGA +    + ++  
Sbjct: 125 HLRPRSNAFSATFRVRSVAAYAIHKFFQDQGFVYTHTPILTGSDCEGAGEMFRVTTLDMM 184

Query: 190 --------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                          F+          Q      A  F   +   P FR E+  + +   
Sbjct: 185 APPISEEGGIDFSQDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSNTVKHAA 244

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL----------------- 275
           EF+ ++ EM+F +  D +   EN+L+ V +   +       F                  
Sbjct: 245 EFWMIEPEMAFADLIDDMEVAENMLKYVIKYVMDECPEEIAFFNQFVDKGLLERLNHVVN 304

Query: 276 ----RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
               ++ Y +A++       +   P+   +   TEH  +   ++F K + V    +    
Sbjct: 305 SEFGKVTYTEAVKLLQESGKEFEYPVEWGIDLQTEHERYLTEQIFKKPVFVTDYPKDI-- 362

Query: 330 PAKGGGGNRAFCDRMNE 346
                   +AF  R+NE
Sbjct: 363 --------KAFYMRLNE 371



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 24/133 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P        K I      F M           D  ++ A    LV    EI 
Sbjct: 351 KPVFVTDYP--------KDIKA----FYMR-------LNEDGKTVAAMDC-LVPGIGEII 390

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+    + + ++    E  +       + G   H G   G +R++M + G
Sbjct: 391 GGSQREERLDVLKARMAELNLN----EEDYWWYLELRKYGETVHSGFGLGFERLIMYITG 446

Query: 553 AKNVREVSLFPMS 565
             N+R+V  FP +
Sbjct: 447 MANIRDVIPFPRT 459


>gi|71281666|ref|YP_269306.1| asparaginyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|123761018|sp|Q481G3|SYN_COLP3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|71147406|gb|AAZ27879.1| asparaginyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 466

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 60/385 (15%), Positives = 124/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V   + + GW+   R    GI FL + D      + A           +  S+ +    G
Sbjct: 16  VNESITIHGWIRTRRDSKAGISFLALHDGSCFDAIQA----IVPNELDNYESDVLKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  +   + +       E+ A ++E+L   E+        + +      +   L  R 
Sbjct: 72  CSVKVTGILVESPGKGQAFEIQATEVEVLGFVEDPDTYPMAAKRHSIEFLREQAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +        R  +  ++   + ++ +   STP++T S  EGA +    S ++  +     
Sbjct: 132 NIGGAVTRVRNCLAQAVHRFLHSKGYFWISTPLITGSDCEGAGEMFRVSTLDMENLPRND 191

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +    Y +                     +   + +   P FR E+  + R   EF+ ++
Sbjct: 192 EGKVDYNKDFFGKETFLTVSGQLNVETYCNALSKVYTFGPTFRAENSNTTRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRI 277
            E++F +  D  +  E +L+ VF+                               +F+R+
Sbjct: 252 PEIAFADLSDAADLAEEMLKYVFKAVLEERPDDMAFFQQRVDKTVLDRLNSVINTDFVRL 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI           N +    ++ +EH  +     F+  + +    +          
Sbjct: 312 DYTDAITILENCGKKFENQVSWGVDLNSEHERYLAEEHFNGPVVLQNYPKDI-----KSF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNDDGKTVAAMDILAPGIGEII 391



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 71/227 (31%), Gaps = 30/227 (13%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FW ++     A +   A     +     +  L+ +  D  FF                N 
Sbjct: 247 FWMVEPEIAFADLSDAADLAEEMLKYVFKAVLEERPDDMAFFQQRVDKTVLDRLNSVINT 306

Query: 420 IAQELGIINC--------NCFE--FCWIMDFPFYEWNEEEKKIDFAHNP--------FTM 461
               L   +           FE    W +D      N E ++     +         +  
Sbjct: 307 DFVRLDYTDAITILENCGKKFENQVSWGVD-----LNSEHERYLAEEHFNGPVVLQNYPK 361

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
                     +D  ++ A   D++  G  EI  G  R    +V+      +G+       
Sbjct: 362 DIKSFYMRLNDDGKTVAAM--DILAPGIGEIIGGSQREERLDVLDSRLEEMGLDIAD--- 416

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            +G      + G  PH G   G +R+V    G +NVR+V  FP + N
Sbjct: 417 -YGWYRDLRRYGTVPHSGFGLGFERLVAYATGMQNVRDVIPFPRTPN 462


>gi|332031478|gb|EGI70962.1| Aspartyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 542

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/315 (20%), Positives = 123/315 (39%), Gaps = 23/315 (7%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKS 64
             +L  +     V L G +H  R  G   F+ +R       G+  V         +   +
Sbjct: 88  IKNLDKNLENQVVWLRGRLHTSRAKGRQCFVVLRQQSYTVQGLAAVNEEISKQMIKFISN 147

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-----RE 119
           +  E ++ +  +VM   ++  + +     +E+  ++I ++S A+        +      E
Sbjct: 148 ITKESIIDVMAIVMPVPSKIESCSQK--DVEVHLKEIFVVSAAKSQLPLQIEDAARPIGE 205

Query: 120 YPE---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
             E           R   R LDLR             +    R  +  + F+E  TP + 
Sbjct: 206 VDETTLNVRVNQDTRLDNRVLDLRTPANQAIFKVEAGVCKLFRDILTRKGFVEIHTPKII 265

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           +++ EG  +    S     ++ A  Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R 
Sbjct: 266 SAASEGGANVFTVSYFKGNAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRH 323

Query: 231 PGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             EF  LD+EM+F     ++++T+  +   +F+E  +        +   Y     ++   
Sbjct: 324 LTEFVGLDLEMAFKYHYHEVVDTIGQMFTELFKELRDNYADDIMAVSQQYPVEPFKFLEP 383

Query: 290 KPDLRNPIIMHNVTE 304
              L  P  +  + E
Sbjct: 384 ALKLEYPQAIELLAE 398



 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 61/150 (40%), Gaps = 22/150 (14%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG +  N ++     DF   +      K   A  PF            N+     +  
Sbjct: 415 KLLGKLIKNKYD----TDFYILD------KYPLAVRPFYTMPD------PNNPK--VSNS 456

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SG  R H  + + +   + GI       +      AF+ G PPH G   
Sbjct: 457 YDMFMRGEEIISGAQRIHDPDFLTERAKHHGIDI----EKIRSYIDAFRYGCPPHAGGGI 512

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G++R+VML LG  N+R+VS+FP        
Sbjct: 513 GMERVVMLYLGLDNIRKVSMFPRDPKRLTP 542


>gi|150391907|ref|YP_001321956.1| asparaginyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|166980083|sp|A6TVS9|SYN_ALKMQ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|149951769|gb|ABR50297.1| asparaginyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 463

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 66/401 (16%), Positives = 130/401 (32%), Gaps = 59/401 (14%)

Query: 5   RTHSCGDL---GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACF 59
           +T S  ++        G  +R+ GW+  +R      F+++ D       Q+V + D   F
Sbjct: 2   KTVSVKEIYRQTEQYAGQSIRVEGWIRTLRASKAFGFIELNDGTFFKNIQIVFDEDLHNF 61

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
                      + I+G +                 E+ A  +E+   A         ++ 
Sbjct: 62  SDVSKFTISSAIIIEGTLEITPG-------AKQPFEIKATNVEL--EAHSHKDYPLQKKR 112

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           +      +   L  R +        R+    ++      + F+   TPI+T S  EGA +
Sbjct: 113 HTFEYLRQIAHLRPRSNAFSAVFRVRSIAAFAIHQFFQEKGFVYTHTPIVTGSDAEGAGE 172

Query: 180 FLVPSRVN--------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRD 222
               S ++              +  F+    +     Q      A  F + +   P FR 
Sbjct: 173 MFRVSTLDFKNIPLDEEQQVDFKKDFFGKETSLTVSGQLAAEAYALAFKKVYTFGPTFRA 232

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------- 275
           E+  + R   EF+ ++ E++F +  D +   E++L+ +             F        
Sbjct: 233 ENSNTARHASEFWMIEPEIAFADLQDNMELAEDMLKYMIRYVMEQAPEELEFFNQFVDKG 292

Query: 276 --------------RICYDDAIRRYGTDKPDLRNPIIM-HNV-TEHFVHSEFRVFSKILS 319
                         ++ Y +A++       +   P+   H++ TEH  +   +VF K   
Sbjct: 293 LIDRLNHVANSEFGKVTYTEAVKMLQESGEEFEYPVEWGHDLQTEHERYLTEKVFKK--- 349

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
             P + +           R   D     A     PG+  I 
Sbjct: 350 --PVFVMDYPKDIKAFYMRMNDDNKTVAAMDLLVPGIGEII 388



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 80/268 (29%), Gaps = 36/268 (13%)

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMG 373
           F K+ +  P +                 +    +A  Q    LA    +      +    
Sbjct: 220 FKKVYTFGPTFRAENSNTARHASEFWMIEPEIAFADLQDNMELAEDMLKYMIRYVMEQAP 279

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSC-FFIAGDPLKFCSFAAD---ARNHIAQELG---- 425
              +  N    + +  RL+             + +K    + +          +L     
Sbjct: 280 EELEFFNQFVDKGLIDRLNHVANSEFGKVTYTEAVKMLQESGEEFEYPVEWGHDLQTEHE 339

Query: 426 --IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             +      +  ++MD+P        K I      F M           D  ++ A   D
Sbjct: 340 RYLTEKVFKKPVFVMDYP--------KDIKA----FYMRMND-------DNKTVAAM--D 378

Query: 484 LVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           L+  G  EI  G  R    +V+      +G+     E  +       + G   H G   G
Sbjct: 379 LLVPGIGEIIGGSQREERLDVLTDRMKQMGLD----EEEYWWYLELRKYGGVKHAGYGLG 434

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            +R +M L G  N+R+V  +P +    +
Sbjct: 435 FERAIMYLTGMANIRDVISYPRTPKSAE 462


>gi|329957693|ref|ZP_08298168.1| lysine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328522570|gb|EGF49679.1| lysine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 574

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 58/272 (21%), Positives = 112/272 (41%), Gaps = 10/272 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   F++++D  G  QV    D  C    K + +     +  L    
Sbjct: 55  VAVAGRIMSRRVMGKASFIELQDSKGRIQVYITRDDICPGEDKEMYNTVFKRLLDLGDFI 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFLDLR 134
             E        G+I + AQK+ +L+ + +    V  +            +R++ R++DL 
Sbjct: 115 GIEGFVFRTQMGEISIHAQKLTVLAKSIKPLPIVKYKDGVAYDSFDDPELRYRQRYVDLI 174

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +  + +  +KR  II +MR  +    + E  TPIL +      AR F           Y
Sbjct: 175 VNDGVKETFLKRATIIKTMRAVLDEAGYTEVETPILQSIPGGASARPFTTHHNSLDMDLY 234

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A + Y + L+  GF+  ++I   FR+E    +  P EF  +++ + + + + ++  
Sbjct: 235 -LRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP-EFTCVELYVQYKDYNWMMGF 292

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            E +L  +    + G   + +   I +    R
Sbjct: 293 TEKLLERICIAVNGGTETTIDGKTISFKAPYR 324



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 53/145 (36%), Gaps = 9/145 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+A+     +      + F
Sbjct: 378 EGTFIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERF 437

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  E  ++          +A Q GMPP  GI  GIDR+ ML+ G   ++EV  FP 
Sbjct: 438 KEQLKLSEKGDDEAMFIDQDFLKALQYGMPPTSGIGIGIDRLTMLMTGQAFIQEVLFFPQ 497

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGL 589
            +        +P+        ELG+
Sbjct: 498 MRPEKVTPKDAPAK-----FMELGI 517


>gi|190575044|ref|YP_001972889.1| asparaginyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|190012966|emb|CAQ46598.1| putative 2 asparaginyl-tRNA synthetase [Stenotrophomonas
           maltophilia K279a]
          Length = 464

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 117/385 (30%), Gaps = 54/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  VR    + F+++ D       QVVA    A F+  K + S   +   G
Sbjct: 17  GGEVTVRGWVRTVRGSANLAFVNVSDGSCFAPIQVVAGDSLANFDEIKRLTSGCSVIATG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++    +  +        E+ A  +E++   E+        +        +   L  R 
Sbjct: 77  TLVKSQGKGQS-------FEIQASAVEVVGWVEDPLTYPIQPKPMSPEFLREVAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +        R  +  ++        F   STPI+T S  EGA      S ++        
Sbjct: 130 NLFGAVTRIRNCLAQAVHRFFHENGFNWISTPIITTSDAEGAGQMFRVSTLDMVNLPRDE 189

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q           + +   P FR E+  + R   EF+ ++
Sbjct: 190 KGAIDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHLAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F +  +     E  L+ +F    N                      + ++  F RI
Sbjct: 250 PEIAFADLAEDARLAEEFLKYLFRAVLNERSDDLAFIAERVDKNAITKLEDFINAPFERI 309

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+            P+   +   TEH         ++     P             
Sbjct: 310 DYTDAVSLLQKSGRKFDFPVEWGLDLQTEHERW-----LTEEHVGRPVVVTNYPEHIKAF 364

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 365 YMRLNDDGKTVAAMDVLAPGIGEII 389



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 12/152 (7%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKA 479
           ++  +  +F + +++      E E+ +   H                  ++ ND     A
Sbjct: 317 LLQKSGRKFDFPVEWGLDLQTEHERWLTEEHVGRPVVVTNYPEHIKAFYMRLNDDGKTVA 376

Query: 480 FQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              D++  G  EI  G  R    +V+    +  G+ +      +       + G  PH G
Sbjct: 377 -AMDVLAPGIGEIIGGSQREERLDVLDARMAQFGLDR----EHYSWYRDFRRYGSVPHAG 431

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              G +R+V+ + G  N+R+   +P +    D
Sbjct: 432 FGLGFERLVVYVCGLSNIRDAIPYPRAPGSAD 463


>gi|19075852|ref|NP_588352.1| cytoplasmic aspartate-tRNA ligase Drs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74676078|sp|O74407|SYDC_SCHPO RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3618213|emb|CAA20876.1| cytoplasmic aspartate-tRNA ligase Drs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 580

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 73/302 (24%), Positives = 123/302 (40%), Gaps = 34/302 (11%)

Query: 5   RTHS-CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFE 60
           RT++   D+   + G  V L   V+  R  G  + F  +R  Y   Q   V N D+   +
Sbjct: 90  RTYTQISDISAKNDGQTVLLRARVYTSRLQGNKMCFFSLRQKYDTIQALAVVNKDTISKQ 149

Query: 61  IAK---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS------------ 105
           + K   S+  E ++ ++G+V        +A +     E+    I ++S            
Sbjct: 150 MVKWCGSISLESIVLVEGIVKKSPEIIKSATV--QDAEIHISSIYVISPIKKNLPFLVED 207

Query: 106 ---------VAEELPLPVFGE-REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155
                     +EE       +        R   R LDLR  T       +  I  + R  
Sbjct: 208 AGRSEEQIRESEENAAEGDSKFVRVNLDTRLDNRVLDLRTPTNQAIFDIQAGICQAFREF 267

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +++ +F E  TP ++ +S EG  +           F  L Q+PQ YKQ+L+A+  +R F+
Sbjct: 268 LLSNSFNEIHTPKMSGASSEGGSNVFKIQYFKTDGF--LSQSPQLYKQMLIAADRERVFE 325

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNF 274
           I P FR ED  + R   EF  LD+EM+F E   +++  +E +   +F+            
Sbjct: 326 IGPVFRAEDSNTYRHMTEFTGLDLEMAFNEHYHEVMEFIEKLFLYIFKTIREKYAKQVAV 385

Query: 275 LR 276
           +R
Sbjct: 386 VR 387


>gi|18311482|ref|NP_563416.1| asparaginyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|110798948|ref|YP_697187.1| asparaginyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168205760|ref|ZP_02631765.1| asparaginyl-tRNA synthetase [Clostridium perfringens E str.
           JGS1987]
 gi|168209738|ref|ZP_02635363.1| asparaginyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|168213424|ref|ZP_02639049.1| asparaginyl-tRNA synthetase [Clostridium perfringens CPE str.
           F4969]
 gi|168217617|ref|ZP_02643242.1| asparaginyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|169343330|ref|ZP_02864340.1| asparaginyl-tRNA synthetase [Clostridium perfringens C str.
           JGS1495]
 gi|182624293|ref|ZP_02952078.1| asparaginyl-tRNA synthetase [Clostridium perfringens D str.
           JGS1721]
 gi|20139876|sp|P58693|SYN_CLOPE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|122958654|sp|Q0TMF3|SYN_CLOP1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|18146166|dbj|BAB82206.1| asparagine-tRNA ligase [Clostridium perfringens str. 13]
 gi|110673595|gb|ABG82582.1| asparaginyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|169298628|gb|EDS80709.1| asparaginyl-tRNA synthetase [Clostridium perfringens C str.
           JGS1495]
 gi|170662749|gb|EDT15432.1| asparaginyl-tRNA synthetase [Clostridium perfringens E str.
           JGS1987]
 gi|170712107|gb|EDT24289.1| asparaginyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|170715076|gb|EDT27258.1| asparaginyl-tRNA synthetase [Clostridium perfringens CPE str.
           F4969]
 gi|177910511|gb|EDT72884.1| asparaginyl-tRNA synthetase [Clostridium perfringens D str.
           JGS1721]
 gi|182380304|gb|EDT77783.1| asparaginyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 465

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/377 (16%), Positives = 129/377 (34%), Gaps = 62/377 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEW 69
                   V++SGW+  +R      F+++ D      V    DS   + ++    +    
Sbjct: 14  TSEYSDKKVKISGWIRTLRASNAFGFIEVNDGSFFKNVQVVFDSAKISNYKEISKLPISS 73

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G ++                E+ A++I +  +++    P+  +R   E +R    
Sbjct: 74  SISVIGTLVETPDSKQP-------FEIQAEEIIVEGMSDSDY-PLQKKRHTFEYLR-TIA 124

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L  R +        R+    ++      + F+   TPILT S  EGA +    + ++  
Sbjct: 125 HLRPRSNAFSATFRVRSVAAYAIHKFFQDQGFVYTHTPILTGSDCEGAGEMFRVTTLDMM 184

Query: 190 --------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                          F+          Q      A  F   +   P FR E+  + +   
Sbjct: 185 APPIAEEGGIDFSQDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSNTVKHAA 244

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL----------------- 275
           EF+ ++ EM+F +  D +   EN+L+ V +   +       F                  
Sbjct: 245 EFWMIEPEMAFADLIDDMEVAENMLKYVIKYVMDECPEEIAFFNQFVDKGLLERLNHVVN 304

Query: 276 ----RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
               ++ Y +A++       +   P+   +   TEH  +   ++F K + V    +    
Sbjct: 305 SEFGKVTYTEAVKLLQESGKEFEYPVEWGIDLQTEHERYLTEQIFKKPVFVTDYPKDI-- 362

Query: 330 PAKGGGGNRAFCDRMNE 346
                   +AF  R+NE
Sbjct: 363 --------KAFYMRLNE 371



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 24/133 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P        K I      F M           D  ++ A    LV    EI 
Sbjct: 351 KPVFVTDYP--------KDIKA----FYMR-------LNEDGKTVAAMDC-LVPGIGEII 390

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+    + + ++    E  +       + G   H G   G +R++M + G
Sbjct: 391 GGSQREERLDVLKARMAELNLN----EEDYWWYLELRKYGETVHSGFGLGFERLIMYITG 446

Query: 553 AKNVREVSLFPMS 565
             N+R+V  FP +
Sbjct: 447 MANIRDVIPFPRT 459


>gi|294781999|ref|ZP_06747331.1| asparagine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294481810|gb|EFG29579.1| asparagine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 461

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 68/413 (16%), Positives = 131/413 (31%), Gaps = 56/413 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
           G   +   + L GWV ++R      F+++ D       Q+V       F+    +     
Sbjct: 11  GEDYLNKEIELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEISRLSIAST 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++               +E+ A++IEI   A+ L  P+  +R   E +R K   
Sbjct: 71  IKVKGTLVKSEGSG-------QDLEVKAKEIEIFQKAD-LEYPLQNKRHTFEYLRTK-AH 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++       NF+    PI+T S  EGA +    + ++   
Sbjct: 122 LRARTNTFSAVFRVRSVLAYALHKFFQENNFVYVHAPIITGSDAEGAGEMFRITTLDLNK 181

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       + F   +   P FR E   + R   E
Sbjct: 182 VPKKENGEVDFSKDFFGKSTNLTVSGQLNLETFCAAFRNVYTFGPTFRAEYSNTARHASE 241

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +   ++   E +++ + +   +       F                   
Sbjct: 242 FWMVEPEIAFGDIFALMELAEAMVKYIIKYVMDNCPEEMEFFNSFIEKGLFDKLNNVLNN 301

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+   +   +EH  +     F K     P +      
Sbjct: 302 DFGRVTYTEAIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYFKK-----PVFVTDYPK 356

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVN 383
                  +   D     A     PG+  I        +   +    K L +  
Sbjct: 357 DIKAFYMKLNEDNKTVRAMDLLAPGIGEIIGGSQREDSYELLSKRMKELGLNE 409



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P        K I      F M           D  +++A   DL+  G  EI
Sbjct: 347 KPVFVTDYP--------KDIKA----FYMK-------LNEDNKTVRAM--DLLAPGIGEI 385

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    E++ +    +G++    E  +       + G  PH G   G +R++M L 
Sbjct: 386 IGGSQREDSYELLSKRMKELGLN----EEDYEFYLDLRRFGSFPHSGYGLGFERMMMYLT 441

Query: 552 GAKNVREVSLFPMSQN 567
           G +N+R+V  FP + N
Sbjct: 442 GMQNIRDVIPFPRTPN 457


>gi|303233071|ref|ZP_07319746.1| asparagine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302480846|gb|EFL43931.1| asparagine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 479

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 66/410 (16%), Positives = 128/410 (31%), Gaps = 56/410 (13%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             + ++GWV  +R      F+ + D      +    +       + + ++ V    G  +
Sbjct: 32  KTITVAGWVRSIRDMKNFGFVTLNDGSCFKDLQVVMERESLHNYEEIAAQNV----GAAL 87

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
             S E           EL A  I +  ++E        ++          + L  R +  
Sbjct: 88  IISGEVELTPDRAQPFELHAHTITVEGISEPDYPMQ--KKRASREFLRTQQHLRSRTNLF 145

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--------- 189
                 R+    ++        F+   TPI+T+S  EGA +    +  +           
Sbjct: 146 RAIFRVRSVAAFAIHSFFQERGFVYVHTPIITSSDAEGAGEMFKVTTFDLEHVPTKDGAV 205

Query: 190 ----SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                F++ P +     Q +    A  F   +   P FR E+  + R   EF+ ++ EM+
Sbjct: 206 DYSQDFFSAPTSLTVSGQLEAENFAMSFGDVYTFGPTFRAENSNTRRHAAEFWMVEPEMA 265

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSN---------------------NFLRICYDD 281
           F + +  ++  E +L+ V                                 +F R+ Y D
Sbjct: 266 FCDLEGYMDVAEAMLKYVISYVMKTCPDEMAMFNSFVDKGLEERLQHVVSSDFARVSYTD 325

Query: 282 AIRRY---GTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
           AI             + P+       TEH  +      +++    P +      A     
Sbjct: 326 AIDILKAAQKQGTTFKYPVEWGVDLQTEHERY-----LTEVHFKKPTFVCDYPAAIKAFY 380

Query: 337 NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386
            R   D     A     PG+  I   +  S     +  + K ++ +  E 
Sbjct: 381 MRMNEDGKTVAAADCLVPGIGEI---IGGSQREERLDKLTKRIHDLGMEP 427



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 47/144 (32%), Gaps = 24/144 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P             A   F M                 A  
Sbjct: 354 HERYLTEVHFKKPTFVCDYP------------AAIKAFYMRMNED--------GKTVAAA 393

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    + + +   ++G+       ++       + G   H G   
Sbjct: 394 DCLVPGIGEIIGGSQREERLDKLTKRIHDLGMEP----EQYKYYCDLRKYGTCHHAGFGL 449

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +R+VM L G  N+R+V   P +
Sbjct: 450 GFERLVMYLTGVDNIRDVLPHPRT 473


>gi|258620161|ref|ZP_05715200.1| asparaginyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|262171670|ref|ZP_06039348.1| asparaginyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|258587519|gb|EEW12229.1| asparaginyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|261892746|gb|EEY38732.1| asparaginyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 466

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 123/385 (31%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAIYDGSCFNPIQAVVPNN----LNNYDNEVLKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  +   + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGTIVESPASGQAFELAATAVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++  +     
Sbjct: 132 NVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 191

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                Y Q                    A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 AGKVDYNQDFFGKETFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + + +    E++L+ VF+                            V ++F ++
Sbjct: 252 PEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIGRLEKFVDSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI            P+   +   +EH        F   + V    +          
Sbjct: 312 DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHFKAPVIVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRMNEDGKTVAAMDVLAPGIGEII 391



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 39/113 (34%), Gaps = 14/113 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M           D  ++ A   D++  G  EI  G  R    +V+       GI   
Sbjct: 365 AFYMRMNE-------DGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMREFGIDP- 414

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                        + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 415 ---EHMDWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|149919126|ref|ZP_01907610.1| asparaginyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149820056|gb|EDM79477.1| asparaginyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 467

 Score =  177 bits (450), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 105/577 (18%), Positives = 177/577 (30%), Gaps = 118/577 (20%)

Query: 1   MHRYRTHSCGDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHY--GITQVVANPD 55
           M   RT     L      D    +R+ GW   VR    + F+ + D    G  QVV  P+
Sbjct: 1   MQSPRTKIAQALQAEIPADGALNLRVKGWARTVRSGKKVTFISLNDGSSFGSLQVVVPPE 60

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
              +E    + +   L ++G ++   A+         ++EL A K+EI+  A+       
Sbjct: 61  VDDYEAITHLTTGSALSVEGELIESPAKG-------QRVELKATKVEIVGKADPSYPLQ- 112

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
            ++ +      +   L +R +T       R+ +  S+        F    TPI+TAS  E
Sbjct: 113 -KKRHGFEFLREQAHLRVRTNTFGAVFRVRSALAQSVHRFFGERGFYYIHTPIITASDTE 171

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GA +    + +  G      +     KQ   A          P F      S +L GE +
Sbjct: 172 GAGEMFRVTTLPVGDPPRDDEGAVDDKQDFFAK---------PTF---LTVSGQLNGETF 219

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            L +   +        T     R    E SN +  ++ F  I  + A      D     +
Sbjct: 220 ALGLSDIY--------TFGPTFRA---ENSNTSRHASEFWMIEPEMAWHDLDDDCQLAED 268

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
            +     T     +E   F                           +R+ + A +     
Sbjct: 269 FVKAMLKTALEDCAEDLAFFDKRIDKG-----------------LIERLTKVAEADFARI 311

Query: 356 LAYIFWRLDESGNVAGMGPV--AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
                  L E    +   PV   K+L                         +        
Sbjct: 312 TYTEAVELLEKSGKSFEFPVEWGKNLQAE---------------------HERYITEEIL 350

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                                 +++D+P     +E K        F M +        ND
Sbjct: 351 G------------------RPTFVVDYP-----KEIK-------AFYMRR--------ND 372

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                A    LV    E+  G  R    +V+   F++      +    +       + G 
Sbjct: 373 DGKTVAAMDLLVPKIGELIGGSQREERLDVLESIFAS---DPHLSVEDYDWYLDTRRFGT 429

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            PH G   G +R+VM   G +N+R+V  FP +   C+
Sbjct: 430 APHAGFGLGFERLVMYATGMENIRDVIPFPRTPRTCE 466


>gi|320104205|ref|YP_004179796.1| lysyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319751487|gb|ADV63247.1| lysyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 587

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 54/272 (19%), Positives = 110/272 (40%), Gaps = 17/272 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSEWVLCID 74
           G  VR++G +   R  G ++FL +RD  G  Q+    +        +   +    ++ +D
Sbjct: 154 GPSVRVAGRIVLRRGQGKVVFLTLRDWTGSLQIFIGKNQVGETAWALTGELDLGDLIGVD 213

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G +          +  TG++ + A  +  LS +  LP P          +R + R++DL 
Sbjct: 214 GTL---------GHTKTGELTVFATGLTFLSKSL-LPPPEKYHGLTDTELRSRMRYVDLA 263

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
            +         R++++ S R  +  + ++E  TP++ A +    AR F+          +
Sbjct: 264 SNPESMAAFLGRSKLVASFRSTLGDQGYVEVETPMMQAIAGGAAARPFVTHHNALDLQLF 323

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ Y + L+  G +R F+I   FR+E       P EF  ++   ++ +   +++ 
Sbjct: 324 -LRIAPELYLKRLLVGGMERVFEIGRVFRNEGISPKHNP-EFTMMEAYQAYGDYRTMMDL 381

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
            E ++             + N   I +     
Sbjct: 382 TERLIVNAINALDGRFERTWNGRAIDFTPPWP 413



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 33/155 (21%)

Query: 421 AQELGIINCNCFE---------FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            +E  +I    FE           +++D+P             A  P T  + G      
Sbjct: 448 GKEHDVIVSEVFEETVEEALEGPIFVIDYP------------AAICPLTKRKVGDPRF-- 493

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF---GGLYRA 528
                  A +++L  +G E+A+     +  ++  Q F      ++  ++         RA
Sbjct: 494 -------AERFELFVHGMELANAYTELNDPDLQDQLFRRQLQGQKEEDSMARIDDDFIRA 546

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  MPP GG+  GIDR+ M+LL   ++R+V LFP
Sbjct: 547 LKHAMPPAGGLGIGIDRLCMVLLDKASIRDVILFP 581


>gi|254169005|ref|ZP_04875844.1| asparaginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622111|gb|EDY34687.1| asparaginyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 430

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 59/272 (21%), Positives = 108/272 (39%), Gaps = 17/272 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H    L    +G  V L GW++R R  G IIF+ +RD   I Q V        E  K + 
Sbjct: 4   HISDVLSYDFIGKEVSLRGWIYRKRRMGKIIFVVLRDSSDIIQCVIEKKKIGNEKFKELD 63

Query: 67  S---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               E  L I+G++             TG  E+  + + I+  +   P+     ++  + 
Sbjct: 64  KVGVESSLEINGVIRKEE------RAPTG-YEVDVKDVNIVGPSYLFPIT----KDKSDE 112

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
                R L LR   ++  +  R  +  ++        + E   PI    + EG       
Sbjct: 113 FLLDNRHLWLRSREMNAILKIRHTVFGAIHEFFRENGYYEVQGPIFVTGAVEGGSTLFEV 172

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++  L Q+ Q Y +  + S  +R + IAP FR E  R+ R   E++  + E+++
Sbjct: 173 PYFGKKAY--LSQSAQFYLETFIFS-LERVYTIAPSFRAEKSRTRRHLTEYWHAEGEVAW 229

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
              +D++   E ++  + ++          FL
Sbjct: 230 YHNEDMMRDEEELIMHIVQKVLEEREKELKFL 261



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R +  +V+L+     G++       +       + G  PH G   G+DR+V  L G  ++
Sbjct: 360 RIYKLDVLLRRMEEEGLNP----EDYYWYVDLRKYGSIPHSGFGLGVDRLVWWLAGLSHI 415

Query: 557 REVSLFPMSQNFCDL 571
           +    +P +      
Sbjct: 416 KYAIPYPRTIRRTKP 430


>gi|167013425|pdb|3BJU|A Chain A, Crystal Structure Of Tetrameric Form Of Human Lysyl-Trna
           Synthetase
 gi|167013426|pdb|3BJU|B Chain B, Crystal Structure Of Tetrameric Form Of Human Lysyl-Trna
           Synthetase
 gi|167013427|pdb|3BJU|C Chain C, Crystal Structure Of Tetrameric Form Of Human Lysyl-Trna
           Synthetase
 gi|167013428|pdb|3BJU|D Chain D, Crystal Structure Of Tetrameric Form Of Human Lysyl-Trna
           Synthetase
          Length = 521

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 59/287 (20%), Positives = 115/287 (40%), Gaps = 17/287 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 59  KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFIHINNKLRRGDIIGV 116

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +   +I +LS      LP        +  R++ R+LDL  +   +
Sbjct: 117 QGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDFVR 173

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              + R++II  +R  +    F+E  TP++        A+ F+        + Y +  AP
Sbjct: 174 QKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAP 232

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ 
Sbjct: 233 ELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMVS 291

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           G+ +  +          ++ Y            D   P    N+ E 
Sbjct: 292 GMVKHITGSY-------KVTYHPDGPEGQAYDVDFTPPFRRINMVEE 331



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 411 KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 470

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 471 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMK 506


>gi|39939075|ref|NP_950841.1| lysyl-tRNA synthetase class II [Onion yellows phytoplasma OY-M]
 gi|81402297|sp|Q6YPY6|SYK_ONYPE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|39722184|dbj|BAD04674.1| lysyl-tRNA synthetase class II [Onion yellows phytoplasma OY-M]
          Length = 511

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 52/292 (17%), Positives = 113/292 (38%), Gaps = 11/292 (3%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L +      V ++G +   R  G   FL ++D     Q     D    +  +  ++  + 
Sbjct: 50  LALEQSQIHVCVAGRIVLKRGQGKAGFLHLQDFNFRMQAYIKLDLVGKDAFQIYQNCDLG 109

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G+      +       T ++ + A +   L+ A +     F   +  E +R K R++
Sbjct: 110 DIIGI------KGFLFKTKTQELTIKALEFIHLTKALKPLPDKFHGLQNREEMR-KNRYV 162

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQG 189
           DL  +   + +   R+ I+  +R     + F+E  TPIL  +     A+ F+        
Sbjct: 163 DLIVNEKTRQVFLTRSLIMKYIRNFFDNQGFLEVETPILQPTLGGASAKPFITHHNALNC 222

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            FY L  A +   + L+  G ++ ++I   FR+E   +   P EF  ++  +++ +  DI
Sbjct: 223 DFY-LRIATELPLKKLIVGGMNKVYEIGRLFRNEGIDATHNP-EFSTIEAYLAYADMQDI 280

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++  +  L+ + ++       +     I +    +         +  I   +
Sbjct: 281 MDLTKQCLQELAQKLFGKLQFTYQNQEIDFSHFAKVSMVASIKEKTGIDFTD 332



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 6/104 (5%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF----SNVGISKEVVENRFGGL 525
           K N+       +++L   G E A+     +      + F        +  +   +     
Sbjct: 390 KQNEADPRFTDRFELFIVGKEFANAFSELNDPIEQEKRFLNQLQQKQLGNDEANDMDYDF 449

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP--MSQN 567
             A   GMPP GG+  G+DR+VMLL    N+R+V LFP   +QN
Sbjct: 450 LNALNYGMPPTGGLGMGLDRLVMLLTDTANIRDVILFPHCKNQN 493


>gi|121586541|ref|ZP_01676327.1| asparaginyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121730129|ref|ZP_01682527.1| asparaginyl-tRNA synthetase [Vibrio cholerae V52]
 gi|147673141|ref|YP_001216861.1| asparaginyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153820100|ref|ZP_01972767.1| asparaginyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153823531|ref|ZP_01976198.1| asparaginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|153830039|ref|ZP_01982706.1| asparaginyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|227081468|ref|YP_002810019.1| asparaginyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|254286606|ref|ZP_04961562.1| asparaginyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|254848419|ref|ZP_05237769.1| asparaginyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|298498613|ref|ZP_07008420.1| asparaginyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|9655785|gb|AAF94456.1| asparaginyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121549220|gb|EAX59252.1| asparaginyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121628120|gb|EAX60655.1| asparaginyl-tRNA synthetase [Vibrio cholerae V52]
 gi|126509352|gb|EAZ71946.1| asparaginyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126518955|gb|EAZ76178.1| asparaginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|146315024|gb|ABQ19563.1| asparaginyl-tRNA synthetase [Vibrio cholerae O395]
 gi|148874479|gb|EDL72614.1| asparaginyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|150423364|gb|EDN15309.1| asparaginyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|227009356|gb|ACP05568.1| asparaginyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227013214|gb|ACP09424.1| asparaginyl-tRNA synthetase [Vibrio cholerae O395]
 gi|254844124|gb|EET22538.1| asparaginyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297542946|gb|EFH78996.1| asparaginyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 481

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 124/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 31  VDSEVTVRGWIRTRRDSKAGISFLAIYDGSCFNPIQAVVPNN----LNNYDNEVLKLTTG 86

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 87  CSVEVTGKIVESPASGQAFELAASDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 146

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++  +     
Sbjct: 147 NVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 206

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                Y Q                    A    + +   P FR E+  + R   EF+ ++
Sbjct: 207 AGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNTSRHLAEFWMVE 266

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + + +    E++L+ VF+                            V ++F ++
Sbjct: 267 PEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARLEQFVESDFAQV 326

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI            P+   +   +EH        F   + V    +          
Sbjct: 327 DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHFKAPVIVKNYPKDI-----KAF 381

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 382 YMRMNEDGKTVAAMDVLAPGIGEII 406



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 14/113 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M           D  ++ A   D++  G  EI  G  R    +++       GI   
Sbjct: 380 AFYMRMNE-------DGKTVAAM--DVLAPGIGEIIGGSQREERLDILDARMREFGIDP- 429

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                        + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 430 ---EHMDWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 479


>gi|320170631|gb|EFW47530.1| aspartyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 531

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 67/292 (22%), Positives = 114/292 (39%), Gaps = 33/292 (11%)

Query: 9   CGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAK 63
             +L  +   G  V L   VH  R  G   FL +R  +    G+  V         +   
Sbjct: 67  IDELSAAKHTGKTVLLRARVHNTRGTGKQAFLVLRQRFVTLQGVIFVGPAVSKQMVKFVA 126

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA---------------- 107
           S+  E  + ++G ++       +  +    IEL   KI  +S A                
Sbjct: 127 SLSKESFVDVEGTIVGVPTPIESCTLH--DIELHVTKIFTVSSAMPRLPFSLDDATNVEP 184

Query: 108 -------EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN 160
                       P           R   R +DLR  T       ++ +    R  + ++N
Sbjct: 185 LEGVETTNSNSEPEDNLIRVGLDTRLDNRVIDLRTTTNQAIYRLQSAVCLLFREFLTSQN 244

Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
           FIE  +P +  ++ E   +    +   Q ++ A  Q+PQ YKQ+ M + F+R F+IAP F
Sbjct: 245 FIEIHSPKIIGTASESGANVFAVTYFKQQAYLA--QSPQFYKQMAMCADFERVFEIAPVF 302

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVS 271
           R ED  + R   EF  LD+EM+F E   ++L+ ++ +   +F+   +     
Sbjct: 303 RAEDSNTHRHLTEFVGLDLEMAFYEHYHEVLDMLDKLFVFIFKGLRDRYANE 354



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 54/135 (40%), Gaps = 20/135 (14%)

Query: 438 MDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
            DF   +      K   A  PF TMP     +          +  YDL   G EI SG  
Sbjct: 416 TDFYMLD------KFPTAVRPFYTMPDPSDPNY---------SNSYDLFMRGEEILSGAQ 460

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H   ++ +      I    ++        AF+ G PPHGG   G++R++ML LG  N+
Sbjct: 461 RVHDPVLLEERAKEKHIEISSIQP----YVDAFKYGAPPHGGGGIGLERVLMLYLGLGNI 516

Query: 557 REVSLFPMSQNFCDL 571
           R  S+FP        
Sbjct: 517 RRTSMFPRDPKRVAP 531


>gi|254166510|ref|ZP_04873364.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596296|ref|YP_003482992.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624120|gb|EDY36681.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534083|gb|ADD08430.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 480

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 63/268 (23%), Positives = 120/268 (44%), Gaps = 21/268 (7%)

Query: 6   THSCGDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           T+   ++  +     G  V ++G ++ +R HG + F D+RD+    Q     D    E  
Sbjct: 31  TNYIEEIVKAPENFMGKKVAVAGRLYALRFHGKVAFGDLRDNGSKIQGFFRMDVLGEEQY 90

Query: 63  KSVRSE----WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           K ++        L I G V              G++ + A++I++ S A    LP     
Sbjct: 91  KFLKKYVDRGDFLWIKGEV---------TRTKKGELSVLAEEIKLASKAL-YDLPHEWFG 140

Query: 119 EYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                 R++ R+LDL  +    +  +KR+ I   +R  +    F+E  TP+L        
Sbjct: 141 IEDTEKRYRQRYLDLMFNKDAFDTFIKRSIIEKEIRMFLWNRGFLEMETPVLQPVYGGAN 200

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F          +Y L  + + Y + L+  G+++ F+IA  FR+ED  +   P EF  
Sbjct: 201 AKPFKTHVNAIDRDYY-LRISDELYLKRLIVGGYNKVFEIAKDFRNEDIDTTHNP-EFTM 258

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEF 264
           +++  S+V+ +D++N  E +++ V ++ 
Sbjct: 259 IEIYQSYVDYNDMMNLTEEMIKHVAQKL 286



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   EE  I          +        +   +    +++L     E+A+G    +  
Sbjct: 350 LFERVCEEDLIQPVFVIDHPRETTPLCKL-HRKDNRLIERFELYVGSVELANGYTELNDP 408

Query: 502 EVMLQAFSN----VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            +  + F        +  E           A + GMPP GG+  GIDR+ MLL G  +++
Sbjct: 409 LLQEKFFREEVERRTLGDEEAHQYDEDFIEALRWGMPPMGGVGIGIDRLTMLLTGNTSIK 468

Query: 558 EVSLFP 563
           EV LFP
Sbjct: 469 EVILFP 474


>gi|24373772|ref|NP_717815.1| asparaginyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|38258372|sp|Q8EEZ1|SYN_SHEON RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|24348158|gb|AAN55259.1|AE015664_2 asparaginyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 466

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 67/389 (17%), Positives = 119/389 (30%), Gaps = 50/389 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    GI FL + D      +     ++       V    + 
Sbjct: 12  GEHAVGSTVTVRGWVRTRRDSKAGISFLAVYDGSCFNPIQGVVPNSLENYDNEV----LK 67

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  + + + +       EL    +E+    E+        + +      +   L
Sbjct: 68  LTAGCSVIVTGDIVESPGAGQAYELQVTAVEVTGWVEDPDTYPMAAKRHSIEHLRELAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R + +      R  +  ++        F+  STP++TAS  EGA +    S ++    
Sbjct: 128 RPRTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAGEMFRVSTLDMENL 187

Query: 190 ------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRTSDGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ E++F   +DI    E +L+  F            F                    
Sbjct: 248 WMVEPEVAFATLNDIAGLAEGMLKYAFNAVLTERMDDLQFFAQHVDKTVIERLQSFVSSD 307

Query: 276 --RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
             ++ Y DA+        +   P+   +   +EH  +     F   + V    +      
Sbjct: 308 FAQVDYTDAVEILQKSGREFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDI---- 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 364 -KAFYMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      + ++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDMRLEEMDLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+V  + G  N+R+V  FP +  
Sbjct: 424 RRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPRAPR 462


>gi|289424110|ref|ZP_06425896.1| asparagine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289155535|gb|EFD04214.1| asparagine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 466

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 124/358 (34%), Gaps = 52/358 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSEW 69
               VG  V ++GW+   R      F+++ D      +    D      F+    +    
Sbjct: 15  SEEYVGKKVCVAGWIRTARISKSFGFIELNDGSFFKNIQIVVDENKLDNFKEISKLAISS 74

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + ++G ++       NA      IE+ A K+ +   ++    P+  ++   E +R    
Sbjct: 75  AILVEGELVKVD----NAKNP---IEIHATKLIVEGDSDS-SYPLQKKKHTFEYLR-TIA 125

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ- 188
            L  R +T       R+ +  ++       NF+   TP++T S  EGA +    + ++  
Sbjct: 126 HLRPRSNTFSAVFRVRSVVAFALHKFFNERNFVYAHTPLITGSDTEGAGEMFQVTTLDMA 185

Query: 189 -------------GSFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                          F+  P       Q    +MA  F   +   P FR E+  + R   
Sbjct: 186 NPPLTEDGKIDYSQDFFGKPTNLTVSGQLNGEIMALAFRNIYTFGPTFRAENSYTGRHAS 245

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-------------------- 272
           EF+ ++ E+ F + +D++   E++++ V                                
Sbjct: 246 EFWMVEPEIVFADLEDLMELAEDMIKFVINYVLENCPEEMAFFNSFIDKGLFERLDKIVS 305

Query: 273 -NFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVW 327
            +F+RI Y +A+            P+       TEH  +    V++  + V    +  
Sbjct: 306 SDFVRITYTEAVDILLKSGHKFEYPVEWGCDLQTEHERYITEEVYNAPVFVTDYPKDI 363



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 54/143 (37%), Gaps = 27/143 (18%)

Query: 427 INCNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           I    +    ++ D+P        K I      F M           D  +++A   DL+
Sbjct: 345 ITEEVYNAPVFVTDYP--------KDIKA----FYMRMND-------DGKTVRAM--DLL 383

Query: 486 CNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
             G  EI  G  R    +V++     +G++    E  +       + G   H G   G +
Sbjct: 384 VPGVGEIIGGSQREERYDVLMDKIREMGLN----EEEYWWYLELRKFGTATHSGFGLGFE 439

Query: 545 RIVMLLLGAKNVREVSLFPMSQN 567
           RI+M L G  N+R+V  FP +  
Sbjct: 440 RIIMYLTGMSNIRDVIPFPRTPK 462


>gi|210632437|ref|ZP_03297365.1| hypothetical protein COLSTE_01262 [Collinsella stercoris DSM 13279]
 gi|210159532|gb|EEA90503.1| hypothetical protein COLSTE_01262 [Collinsella stercoris DSM 13279]
          Length = 661

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 59/301 (19%), Positives = 118/301 (39%), Gaps = 19/301 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---IAKS 64
             G          V + G V   R  G I+FL +RD     Q+    +    E     K 
Sbjct: 53  YEGLANEEFASETVTVGGRVVAKRGQGKIMFLVLRDPSADIQLFCRVNDVEEESWATLKK 112

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +    ++   G+V              G++ ++ +++++LS A   PLP        +  
Sbjct: 113 LDLGDIIQATGVVTRTKR---------GELSVAPRELKLLSKAVR-PLPEKFHGLSDKET 162

Query: 125 RFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLV 182
           R++ R++DL  +  + +   KR+ II++ R  M  + ++E  TPIL +      A+ F+ 
Sbjct: 163 RYRQRYVDLIVNEDVRETFRKRSAIISTFRRYMEDDGYMEVETPILQSIQGGATAKPFIT 222

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y L  A + + + L+  G++R F+I   FR+E       P EF  ++   +
Sbjct: 223 HFNALNQENY-LRIATELHLKRLLVGGYERVFEIGRIFRNEGMDLTHNP-EFTTMEAYRA 280

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           + + + +    E V++           +     +I              ++ + ++   V
Sbjct: 281 YSDLEGMKELAEGVIKAAATAVGLEGIIEYQGQQIDLFSPWAS--RSMTEIVSDVLGREV 338

Query: 303 T 303
           T
Sbjct: 339 T 339



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 59/160 (36%), Gaps = 27/160 (16%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             A      I  ELG          ++ D+P  E +   K+                   
Sbjct: 362 WTAGKLIAEIYDELG--EDTIVNPTFVCDYPV-EVSPLAKR------------------N 400

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLY 526
             D       +++LV  G E A+     +      + F+     K    +          
Sbjct: 401 EEDPR--LTHRFELVIAGHEYANAFSELNDPVDQAERFAAQMAEKAGGDDEAMEYDEDYV 458

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           RA + GMPP GGI  GIDR+VMLL  + ++R+V LFP  +
Sbjct: 459 RALEYGMPPAGGIGIGIDRVVMLLTNSTSIRDVLLFPHMK 498


>gi|163800697|ref|ZP_02194597.1| asparaginyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159175046|gb|EDP59843.1| asparaginyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 466

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 125/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +   E +    G
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNN----LNNYDDEVLKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPAKGQDFELAATDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++  +     
Sbjct: 132 NVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTE 191

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +    Y +                    A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 EGKVDYNEDFFGKETFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            E++F + +DI    E++L+ VF+           F                      ++
Sbjct: 252 PEVAFADLEDIAKLSEDMLKFVFKAVLAECRDDLEFFAQRIDKEAITRLEQFVSSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI+       +   P+   +   +EH        F   + V    +          
Sbjct: 312 DYTDAIQILIDSGREFEFPVEWGIDMSSEHERFLAEEHFKAPVIVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             RA  D     A     PG+  I 
Sbjct: 367 YMRANDDGKTVAAMDVLAPGIGEII 391



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 6/102 (5%)

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           ++ ND     A   D++  G  EI  G  R    +V+ +    VGI              
Sbjct: 368 MRANDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDERMREVGIDP----EHMNWYRD 422

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 423 LRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|153854771|ref|ZP_01996005.1| hypothetical protein DORLON_02003 [Dorea longicatena DSM 13814]
 gi|149752678|gb|EDM62609.1| hypothetical protein DORLON_02003 [Dorea longicatena DSM 13814]
          Length = 463

 Score =  177 bits (449), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/353 (18%), Positives = 116/353 (32%), Gaps = 51/353 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
             S +   V + GWV  +R      F+ + D       QVV +     F     +     
Sbjct: 13  SDSYMDQKVTIGGWVRSIRGSKAFGFIVVNDGTFFEPLQVVYHDKMDNFAEISKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A  +E+   +     P+  +R   E +R     
Sbjct: 73  VIVTGTLVATPQ-------AKQPFEIQADTVEVEGASAPDY-PLQKKRHSFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++        F+   TP++T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSLTAYAIHKFFQERGFVYVHTPLITGSDCEGAGEMFQVTTMDLNN 183

Query: 190 -------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+    +     Q      A  F   +   P FR E+  + R   E
Sbjct: 184 VPKNEDGSVDYSKDFFGKETSLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSN 272
           F+ ++ EM+F + DD +   E +L+ V                            N VS+
Sbjct: 244 FWMIEPEMAFADLDDDMFVAEAMLKYVINYVLENAPEEMNFFNSFVDKGLLERLHNVVSS 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
           +F R+ Y +A+             +       TEH  +    VF + + V   
Sbjct: 304 DFARVTYTEAVELLEKHNDKFEYKVTWGTDLQTEHERYLTEEVFKRPVFVTDY 356



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 52/150 (34%), Gaps = 24/150 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +         ++ D+P     +E K        F M        K ND     A  
Sbjct: 338 HERYLTEEVFKRPVFVTDYP-----KEIK-------AFYM--------KLNDDGKTVAAV 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    + +      +G+     E  +       + G   H G   
Sbjct: 378 DCLVPGIGEIIGGSQREDDYDKLKARMDELGLK----EEDYKFYMDLRKYGSTRHAGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R VM L G  N+R+V  FP + N C+L
Sbjct: 434 GFERCVMYLTGMGNIRDVIPFPRTVNNCEL 463


>gi|225009991|ref|ZP_03700463.1| lysyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005470|gb|EEG43420.1| lysyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 564

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 11/255 (4%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V +SG + R +  G   F +I+D  G  QV  N D           +E    +  L 
Sbjct: 46  GKQVIVSGRLMRKKVQGKASFAEIQDSEGRIQVYFNRDEIDTTPDSQQYNEVFKKLIDLG 105

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKYRF 130
                E        G+  +  +K  +LS A         + +           +R++ R+
Sbjct: 106 DILGIEGTLFTTQVGEKTVLVKKFTLLSKALRPLPLPKVDADGKVHDEFNDPELRYRQRY 165

Query: 131 LDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           +DL  +   K+  +KRT+I NS+R     + ++E  TPIL        AR F+       
Sbjct: 166 VDLIVNPQVKDTFIKRTKITNSIRKFFNDKGYLEVETPILQPIPGGASARPFITHHNALN 225

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ +   
Sbjct: 226 MPLY-LRVANELYLKRLIVGGFDGVYEFSKDFRNEGMDRTHNP-EFTVMELYVAYKDYHW 283

Query: 249 ILNTMENVLRGVFEE 263
           +++T E +L  +  E
Sbjct: 284 MMDTTEKLLETIAME 298



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+ NG E+A+     +        F
Sbjct: 373 EHHYVQPTFITDYPKEMSPLTKEHRSNPALTERFELMVNGKELANAYSELNDPIDQRARF 432

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +     E  ++          RA + GMPP  GI  GIDR+VML+    +++EV  FP 
Sbjct: 433 EDQLALSEKGDDEAMFIDQDFLRALEYGMPPTSGIGIGIDRLVMLMTNNASIQEVLFFPQ 492

Query: 565 SQ 566
            +
Sbjct: 493 MR 494


>gi|320164122|gb|EFW41021.1| lysyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 551

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 57/266 (21%), Positives = 111/266 (41%), Gaps = 16/266 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK---SVRSE 68
           G S     V ++G ++  R  G  +IF D+R      QV+A+  +   +  K     R  
Sbjct: 73  GSSLTDVTVSVAGRIYSKRESGAKLIFYDLRGEGVKIQVMADARTLEGDFGKINARFRRG 132

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G                G++ +   ++ +LS      LP        + +R++ 
Sbjct: 133 DIIGVRG---------HPGKSKRGELSIFPVELTLLSPCLR-VLPTLHFGLKDQELRYRQ 182

Query: 129 RFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R+LDL   D      V R +IIN +R  +    F+E  TP++   +        +    +
Sbjct: 183 RYLDLMLNDATRNKFVVRNKIINYLRRFLDQLGFLEVETPMMNMIAGGATAKPFITHHND 242

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
                 +  AP+ Y + L+  G DR ++I   FR+E       P EF   +  M++ + +
Sbjct: 243 LNMNLFMRIAPELYLKQLVVGGLDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYN 301

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNN 273
           D+++  E +L G+ +  + G  +  +
Sbjct: 302 DLMSITETLLSGMVKYITGGYVIEYH 327



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 4/95 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++L  +  E+ +     +      + F +    K   ++           + + 
Sbjct: 435 PGLTERFELFVSKKEVCNAYTELNDPIYQRKMFDDQAKDKAAGDDEAQVIDEVFCTSLEF 494

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP GG   G+DR+ M L  + N++EV LFP  +
Sbjct: 495 GLPPTGGWGMGLDRLTMFLTDSNNIKEVLLFPAMK 529


>gi|153826594|ref|ZP_01979261.1| asparaginyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149739606|gb|EDM53826.1| asparaginyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 481

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 124/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 31  VDSEVTVRGWIRTRRDSKAGISFLAIYDGSCFNPIQAVVPNN----LNNYDNEVLKLTTG 86

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 87  CSVEVTGKIVESPASGQAFELAASDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 146

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++  +     
Sbjct: 147 NVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 206

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                Y Q                    A    + +   P FR E+  + R   EF+ ++
Sbjct: 207 AGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNTSRHLAEFWMVE 266

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + + +    E++L+ VF+                            V ++F ++
Sbjct: 267 PEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARLEQFVDSDFAQV 326

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI            P+   +   +EH        F   + V    +          
Sbjct: 327 DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHFKAPVIVKNYPKDI-----KAF 381

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 382 YMRMNEDGKTVAAMDVLAPGIGEII 406



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 14/113 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M           D  ++ A   D++  G  EI  G  R    +++       GI   
Sbjct: 380 AFYMRMNE-------DGKTVAAM--DVLAPGIGEIIGGSQREERLDILDARMREFGIDP- 429

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                        + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 430 ---EHMDWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 479


>gi|262037915|ref|ZP_06011340.1| asparagine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261748058|gb|EEY35472.1| asparagine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 462

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 66/389 (16%), Positives = 132/389 (33%), Gaps = 56/389 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   + L+GW+ ++R      F+++ D       Q+V +     FE    +     
Sbjct: 12  TEKYLDKEIELNGWIKKIRSQKNFGFIELNDGTFFNGIQIVIDDTLPNFEEISKLTISSS 71

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++    +           E+ A K+E+   ++    P+  +R   E +R     
Sbjct: 72  IKVYGKLVKSEGKG-------QDYEIKADKVEVYDKSDSDY-PLQNKRHTFEFLR-TIAH 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +T       R+ +  ++      +NF+   TPI+T S  EGA +    + ++   
Sbjct: 123 LRPRTNTFFAVFRVRSILAYAIHKFFQEKNFVYVQTPIITGSDAEGAGEMFRLTTLDLEK 182

Query: 191 FYALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                +    +KQ                     + F   +   P FR E+  + +   E
Sbjct: 183 LPRTEKGDIDFKQDFFGKESNLTVSGQLNVETFCTAFKNTYTFGPTFRAENSNTPKHAAE 242

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-------------------- 273
           F+ ++ E++F + D  ++ +E +++ + +                               
Sbjct: 243 FWMMEPEIAFADLDVNMDVIEEMIKYIVKYVMEHAKEEMEFFNKFIDKELFERLDVLMNS 302

Query: 274 -FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
            F RI Y +AI      K D    +   +   TEH  +   + F K     P +      
Sbjct: 303 GFERITYTEAIEILKNAKQDFEYKVEWGIDLQTEHERYLAEKHFKK-----PVFVTDYPK 357

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
                  +   DR    A     PG+  I
Sbjct: 358 DIKAFYMKLNKDRKTVRAVDLLAPGIGEI 386



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 26/147 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P        K I      F M           D  +++A  
Sbjct: 337 HERYLAEKHFKKPVFVTDYP--------KDIKA----FYMK-------LNKDRKTVRAV- 376

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  EI  G  R    +V+L   + +G++++             + G  PH G  
Sbjct: 377 -DLLAPGIGEIVGGSQREDNYDVLLDKINQMGLNEQDYW----WYLDLRKYGSVPHSGFG 431

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G DRI+M + G  N+R+V  FP +  
Sbjct: 432 LGFDRILMYITGMTNIRDVIPFPRTTK 458


>gi|153212269|ref|ZP_01948057.1| asparaginyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124116647|gb|EAY35467.1| asparaginyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 481

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 124/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 31  VDSEVTVRGWIRTRRDSKAGISFLAIYDGSCFNPIQAVVPNN----LNNYDNEVLKLTTG 86

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 87  CSVEVTGKIVESPASGQAFELAASDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 146

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++  +     
Sbjct: 147 NVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 206

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                Y Q                    A    + +   P FR E+  + R   EF+ ++
Sbjct: 207 AGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNTSRHLAEFWMVE 266

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + + +    E++L+ VF+                            V ++F ++
Sbjct: 267 PEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARLEQFVDSDFAQV 326

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI            P+   +   +EH        F   + V    +          
Sbjct: 327 DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHFKAPVIVKNYPKDI-----KAF 381

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 382 YMRMNEDGKTVAAMDVLAPGIGEII 406



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 14/113 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M           D  ++ A   D++  G  EI  G  R    +++       GI   
Sbjct: 380 AFYMRMNE-------DGKTVAAM--DVLAPGIGEIIGGSQREERLDILDARMREFGIDP- 429

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                        + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 430 ---EHMDWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 479


>gi|73988101|ref|XP_851061.1| PREDICTED: similar to CG6796-PA [Canis familiaris]
          Length = 477

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 109/250 (43%), Gaps = 18/250 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V++ GW+  VR    ++FL I D   +  +    DS+     + +     + + G +
Sbjct: 41  GERVKVQGWIRSVRSQKEVLFLHINDGSSLESLQVVADSSFDN--RELAFGSSVEVQGQL 98

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +   ++  N       +EL A+KIE++   +    P   +  +P     +Y  L  R + 
Sbjct: 99  VKSPSKKQN-------MELKAEKIEVVGNCDATAFPFKYKERHPLEYLRQYPHLRCRTNA 151

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-----RVNQGSFY 192
           L   +  R+    ++        F+   TPI+T++  EGA +          ++ + +F+
Sbjct: 152 LGSILRVRSEATAAIHSFFKDNGFVHIHTPIITSNDCEGAGELFQVEPSSKIKMPEENFF 211

Query: 193 ---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
              A      Q    +M+  F + F   P FR E+ +S R   EFY ++ E+SFVE   D
Sbjct: 212 NVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEISFVESLQD 271

Query: 249 ILNTMENVLR 258
           ++  ME + +
Sbjct: 272 LMQVMEGLFK 281



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 54/153 (35%), Gaps = 25/153 (16%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            H   E  ++        +++++P             A  PF M                
Sbjct: 347 LHTEHEKYLVKHCGNIPVFVINYPL------------ALKPFYMRDNED------GPQHT 388

Query: 478 KAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
            A   DL+  G  E+  G +R      + Q  +  G+++      +       + G  PH
Sbjct: 389 VA-AVDLLVPGVGELFGGSLREERYHFLEQRLARSGLTET-----YQWYLDLRRFGSVPH 442

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           GG   G +R +  +LG  N+++V  FP   + C
Sbjct: 443 GGFGMGFERYLQCILGIDNIKDVIPFPRFTHSC 475


>gi|291546668|emb|CBL19776.1| asparaginyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 463

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 87/281 (30%), Gaps = 28/281 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWV 70
               +   + + GWV  VR      F+ + D      +    + +   F     +     
Sbjct: 13  REQYLDKEITVGGWVRSVRDSKAFGFIVLHDGSFFETLQIVYHDNMENFAEVSKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A +I +   +         ++ +          
Sbjct: 73  IIVKGTLVATPQ-------AKQPFEIQATEISVEGASAPDYPLQ--KKRHSLEYLRTMTH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++        F+   TP++T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSLCAYAIHKFFQERGFVYVHTPLITGSDCEGAGEMFQVTTLDPKN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 184 IPLTEDGSVDYSQDFFGKETNLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           F+ ++ E +F +  D +   E +L+ V            NF
Sbjct: 244 FWMIEPECAFADLQDAMELAEAMLKYVIRYVFENAPEEMNF 284



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 48/139 (34%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K        F M           D  ++ A    LV    EI 
Sbjct: 349 RPVFVTDYP-----KEIK-------AFYMK-------LNEDGKTVAAMDC-LVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + +      +G+        +       + G   H G   G +R VM L G
Sbjct: 389 GGSQREDDYDKLKTRMDELGLKP----EDYDFYLDLRKYGSTRHSGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP +   CDL
Sbjct: 445 MGNIRDVIPFPRTVKNCDL 463


>gi|325286737|ref|YP_004262527.1| Asparaginyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324322191|gb|ADY29656.1| Asparaginyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 477

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 58/291 (19%), Positives = 109/291 (37%), Gaps = 31/291 (10%)

Query: 6   THSCGDL-GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IA 62
           T+S  DL     +   V +SGWV   R +    F+ + D   I  +    D    +  + 
Sbjct: 3   TNSIKDLLSGKHLLQEVTVSGWVKTFRSNR---FIALNDGSTIQNIQCVVDFEKLDESLL 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K V +   + + G ++    +  +       +E+    +EI   A+    P+  ++   E
Sbjct: 60  KQVSTGAAIKVKGTLVESQGKGQS-------VEIQVASLEIHGGADPETYPIQPKKHTLE 112

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R K   L +R +T    +  R+ +  ++        F    TPI+T S  EGA +   
Sbjct: 113 FLREK-AHLRVRTNTFSAVMRMRSALSFAVHQYFQQNGFYHVHTPIITGSDAEGAGEIFK 171

Query: 183 PSRVNQ--------------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
            S ++                 F+          Q +    A G  + +   P FR E+ 
Sbjct: 172 VSTLDSKKPPLKEDGSVDYSEDFFGKETNLTVSGQLEAETYAMGLGKVYTFGPTFRAENS 231

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            + R   EF+ ++ EM+F + D  ++  E+ ++ V             FL 
Sbjct: 232 NTSRHLAEFWMIEPEMAFYDLDANMDLAEDFIKSVLSYVLENCKDDLEFLE 282



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 14/118 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M           D  +++A   D++  G  EI  G  R    +V+L+   
Sbjct: 369 DYPAKIKAFYMR-------LNEDGKTVRAM--DILFPGIGEIVGGSQREERLDVLLEKMK 419

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + I ++ +           + G   H G   G +R+V+   G  N+R+V  FP +  
Sbjct: 420 ALDIDEKELW----WYTDLRKYGSAVHSGFGLGFERLVLFATGMGNIRDVIPFPRTPQ 473


>gi|120599027|ref|YP_963601.1| asparaginyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|146292902|ref|YP_001183326.1| asparaginyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166231676|sp|A4Y6E4|SYN_SHEPC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166232737|sp|A1RK52|SYN_SHESW RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|120559120|gb|ABM25047.1| asparaginyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|145564592|gb|ABP75527.1| asparaginyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 466

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 68/389 (17%), Positives = 119/389 (30%), Gaps = 50/389 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    GI FL + D      +     ++       V    + 
Sbjct: 12  GEHAVGSKVTVRGWVRTRRDSKAGISFLAVYDGSCFNPIQGVVPNSLENYDNEV----LK 67

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  + + + +       EL   ++E+    ++        + +      +   L
Sbjct: 68  LTAGCSVVMTGDVVESPGAGQAFELQVTELEVTGWVDDPDTYPMAAKRHSIEHLRELAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R + +      R  +  ++      E FI  STP++TAS  EGA +    S ++    
Sbjct: 128 RPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVSTLDMENL 187

Query: 190 ------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRTSEGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ E++F    DI    E +L+  F            F                    
Sbjct: 248 WMVEPEVAFATLSDIAGLAEAMLKYAFNAVLTERMDDLQFFAQHVDKTVIERLQSFVSSD 307

Query: 276 --RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
             ++ Y DA+            P+   +   +EH  +     F   + V    +      
Sbjct: 308 FAQVDYTDAVDILQKCGKTFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDI---- 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 364 -KAFYMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + + ++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDMRLAEMDLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+V  + G  N+R+V  FP +  
Sbjct: 424 RRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPRAPR 462


>gi|255932391|ref|XP_002557752.1| Pc12g09250 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582371|emb|CAP80552.1| Pc12g09250 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 624

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 59/293 (20%), Positives = 123/293 (41%), Gaps = 18/293 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDS----ACFEIAKSVRS 67
           G       VR++G ++  R  G  + F DIR      QV+    S       E  + +R 
Sbjct: 117 GEQKPDVTVRVAGRIYTKRTSGNKLNFYDIRSEGVKVQVMCQAQSATGKPFEEQHEHLRR 176

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             ++ I G        T   N   G++ + A ++ +L+      +P        +  RF+
Sbjct: 177 GDIVGIVGF----PGRTNPKNRDDGELSIFATEVVLLTPCL-HAIPSEHYGFQDKEQRFR 231

Query: 128 YRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSR 185
            R+LDL  +   +++ + R++I++ +R      +FIE  TP++ A +    A+ F+    
Sbjct: 232 QRYLDLIMNERSRDVLITRSKIVSYIRNYFEKRDFIEVETPMMNAIAGGATAKPFVTHHN 291

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            +  + + +  AP+ Y ++L+  G +R  ++   FR+E       P EF   +   ++ +
Sbjct: 292 EHDMNLF-MRVAPELYLKMLVVGGLNRVMEVGRQFRNEGIDLTHNP-EFTTCEFYQAYAD 349

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
             D++ T E+++ G+ +  + G     +                 P  R  ++
Sbjct: 350 VYDLMETTEDLVSGLVKHVTGGYETVFH----TQSGETYNVNWKAPWRRVEMM 398



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
           +    +++      EI +     +        F      KE  ++          ++ + 
Sbjct: 481 TGLCERFEAFVCTKEITNAYTELNDPFDQRMRFEEQANQKEQGDDEAQVIDENFCQSLEY 540

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+PP GG   GIDR+VM L    +++EV  FPM + 
Sbjct: 541 GLPPTGGWGMGIDRLVMFLTDNYSIKEVLTFPMMKE 576


>gi|85058993|ref|YP_454695.1| asparaginyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123738970|sp|Q2NU85|SYN_SODGM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|84779513|dbj|BAE74290.1| asparaginyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 466

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 125/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
             S + + GWV   R    GI FL + D      + A  ++        +    +    G
Sbjct: 16  ADSEITVQGWVRTRRDSKAGISFLAVYDGSCFDPLQAVINNTLPNYQNDI----LRLTSG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +S +   + +     + E+ AQ IE+L   ++        + +      +   L  R 
Sbjct: 72  CSVSVTGRVVESLGGGQRYEIQAQAIEVLGWVDDPDTYPMAAKRHSVEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++   M  + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQAIHRFMDEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRTP 191

Query: 188 ------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      A    + +   P FR E+  + R   EF+  +
Sbjct: 192 DGKVNYDEDFFGKEAFLTVSGQLNGESYACALSKIYTFGPTFRAENSNTSRHLAEFWMAE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   DD     E +L+ VF+                            +S +F ++
Sbjct: 252 PEVAFATLDDAAGLAEAMLKYVFQAVLTERADDMQFFAERIDKEAINRLKQFISADFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y  A+           NP+   +   +EH  +   + F   + V    +          
Sbjct: 312 DYTKAVEILQNCGQTFENPVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRMNDDGKTVAAMDVLAPGIGEII 391



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 45/120 (37%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    + + Q 
Sbjct: 347 EKHFKAPVVVKNYPKDIKAFYMRMNDDGKTVAAMDVLAPGIGEIIGGSQREERLDRLDQR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + +G++K+             + G  PH G   G +R+++ + G +N+R+V  FP S  
Sbjct: 407 LAEMGLNKDDYW----WYRDLRRYGTVPHSGFGLGFERLIVYVTGMQNIRDVIPFPRSPR 462


>gi|190345427|gb|EDK37310.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 587

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 55/302 (18%), Positives = 115/302 (38%), Gaps = 20/302 (6%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIA----KSVRSEWVLCI 73
            +++SG +   R  G  + F  ++ D   +  +    D A  E      + +R   V+ +
Sbjct: 127 EIKVSGRIMGKREAGSKLKFYVLKGDGVQVQVMAQAQDVASAEEYAKMHEYLRRGDVIGV 186

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G        T  A    G++ + A  +++L+      LP        +  R++ R+LDL
Sbjct: 187 TGY----PGRTNPAKGGEGELSVFATSVQLLTPCL-HMLPTEHFGFKDQEARYRKRYLDL 241

Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             + ++      R++II  +R  + + +FIE  TP++   +        +    +     
Sbjct: 242 IMNDSVRDRFKVRSKIIGFIRDFLDSRDFIEVETPMMNVIAGGATAKPFITHHNDLNMDM 301

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ + + L+  G DR ++I   FR+E       P EF   +   ++ +  D+++ 
Sbjct: 302 FMRVAPELFLKELVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDM 360

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            E +   + ++ +          +I Y            D   P    N+ E        
Sbjct: 361 TEVLFSEMVKKITGDY-------KITYHPEGLEGKAMTLDFSRPWKRINMIEELEKVYNV 413

Query: 313 VF 314
            F
Sbjct: 414 KF 415



 Score = 77.4 bits (189), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 6/111 (5%)

Query: 459 FTMPQGGMESLKGNDLLSI--KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F      M S        I     ++++     EI +     +      Q F      K 
Sbjct: 467 FIFGHPQMMSPLAKKDRKIPGLCERFEVFVATKEICNAYTELNDPFDQRQRFEEQAKQKA 526

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             ++           A + G+PP  G   GIDR+ M L  +  +REV LFP
Sbjct: 527 QGDDEAQLVDETFCNALEYGLPPTAGWGCGIDRLAMFLTDSNTIREVLLFP 577


>gi|325103136|ref|YP_004272790.1| asparaginyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324971984|gb|ADY50968.1| asparaginyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 482

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 57/291 (19%), Positives = 109/291 (37%), Gaps = 30/291 (10%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EI 61
            R      L  ++ G  V + GWV   R +    F+ + D   ++ +    D      +I
Sbjct: 3   KRNKVRDLLKSTEFGKEVIVMGWVKTFRNNQ---FIALNDGSTLSNLQVVVDFENTSGDI 59

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K + +   +   G ++    +          +E+ A  +EIL  ++    P+  ++   
Sbjct: 60  LKKITTGAAVKAIGTLVESVGKGQT-------VEVKANTVEILGESDAEKYPLQPKKHSL 112

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R K   L  R  T +     R  +  ++        F    TPI+TAS  EGA +  
Sbjct: 113 EFLREK-AHLRFRTTTFNAVFKVRHALAFAIHKFFNERGFTYLHTPIITASDAEGAGEMF 171

Query: 182 VPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             + +  G               F+          Q +  L A      +   P FR E+
Sbjct: 172 RVTTLELGNPPRDEQGNINFKEDFFGRSTNLTVSGQLEGELGAMALGEIYTFGPTFRAEN 231

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
             + R   EF+ ++ E++F + +D ++  E++L+ V +   +       FL
Sbjct: 232 SNTTRHLAEFWMIEPEVAFADLEDNMDLAEDMLKYVIKYALDNCAEEIEFL 282



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 39/116 (33%), Gaps = 8/116 (6%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                  F M Q    +     + ++      L     EI  G  R    E +      +
Sbjct: 371 YPAEIKSFYMRQDDNCAEGKQTVSAMDI----LFPGIGEIVGGSQREERLERLEARMDEI 426

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           GI K    +         + G  PH G   G +R+V+ + G  N+R+V  FP    
Sbjct: 427 GIPK----DELYWYLDTRRFGTAPHAGFGLGFERLVVFVTGMTNIRDVIPFPRYPK 478


>gi|295087515|emb|CBK69038.1| asparaginyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
          Length = 447

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 66/340 (19%), Positives = 119/340 (35%), Gaps = 36/340 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEW 69
           L  +     V ++GWV   R    I F+ I D   +   Q+VA  +    +  K V +  
Sbjct: 9   LKTTTYNINVSVNGWVRTHRQSKNISFIAINDGSTVHNLQIVAEHEKIKKDFLKLVTTGS 68

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + +DG+    +    +        E+ AQ I +   A+    P+  ++E+         
Sbjct: 69  AIRVDGMFALSTGNQQHG-------EIIAQNIVLYGTADPQEYPLQ-KKEHSLDFLRNIA 120

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR +        R  +  ++        F   +TPI+T S  EGA +        + 
Sbjct: 121 HLRLRTNIFGAIFRMRHNMAFAIHRYFNERGFFYFNTPIITTSDSEGAGELFEVKTELKD 180

Query: 190 SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+   A      Q +  L A      +  +P FR E+  + R   EF+ ++ E++F + 
Sbjct: 181 DFFGSPANLTVSGQLEGELGALALGAIYTFSPTFRAENSNTFRHLSEFWMIEPEVAFNDI 240

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRICYDDAIRR 285
           +D ++  E+ L+ +                                N F+R+ Y  AI  
Sbjct: 241 NDNMDLAEDFLKYLIRYALENCESDLAFLNDNVDNGLMDKLHFVANNEFMRLPYSKAIEI 300

Query: 286 YGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
                     P+   +    EH  H     F + + V   
Sbjct: 301 LQESGRQFDYPVKPGIDLCAEHERHLVEEYFRRPVIVTDY 340



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 24/146 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++         + D+P     +E K        F M Q         D  +++A  
Sbjct: 322 HERHLVEEYFRRPVIVTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 362

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R      +L+    + ++      +      + + G  PH G   
Sbjct: 363 V-LFPKIGEIIGGSEREADYTKLLRRMKELNMNT----EKLWWYLESRKFGTVPHSGFGL 417

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G  N+R+V  FP +  
Sbjct: 418 GFERLMLFITGMTNIRDVIPFPRTPR 443


>gi|90579564|ref|ZP_01235373.1| asparaginyl-tRNA synthetase [Vibrio angustum S14]
 gi|90439138|gb|EAS64320.1| asparaginyl-tRNA synthetase [Vibrio angustum S14]
          Length = 466

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 72/387 (18%), Positives = 127/387 (32%), Gaps = 54/387 (13%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYG---ITQVVANPDSACFEIAKSVRSEWVLC 72
           V S V + GW+   R    GI FL I D      I  VV N  +   E    + +   + 
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNELNNYQEEVLKLTTGCSVE 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G +++  A+           EL+A  ++++   E+       +  +      +   L 
Sbjct: 76  VTGTIVASPAKG-------QDFELAATNVKVVGWVEDADSYPMAKTRHSIEYLREVAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----- 187
            R + +      R  +  ++      + FI  S P++TAS  EGA +    S ++     
Sbjct: 129 PRTNVIGAVARVRNCLSQAIHRFYHEQGFIWMSAPLITASDCEGAGEMFRVSTLDLANVP 188

Query: 188 ---------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 189 MTVEGNVDFDKDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F E DD+    E++L+ VF+                            V+++F
Sbjct: 249 MVEPEVAFAELDDVAKLAEDMLKYVFKAVLEERRDDLEFFASRIDKEAITRLEQFVTSDF 308

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
            ++ Y DAI+            +         + SE   F           V   P    
Sbjct: 309 AQVDYTDAIKILQDSGRKFEFDVEWG----IDMSSEHERFLAEEHFKAPVIVKNYPKDIK 364

Query: 335 GGNRAFCDR-MNEWARSQGQPGLAYIF 360
                  D      A     PG+  I 
Sbjct: 365 AFYMRMNDDGKTVAAMDVLAPGIGEII 391



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 67/224 (29%), Gaps = 39/224 (17%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y+F  + E         +    + ++ EAI         D       D +K    +  
Sbjct: 270 LKYVFKAVLE----ERRDDLEFFASRIDKEAITRLEQFVTSDFAQVDYTDAIKILQDSGR 325

Query: 416 ---ARNHIA------QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
                           E  +   +      + ++P        K I      F M     
Sbjct: 326 KFEFDVEWGIDMSSEHERFLAEEHFKAPVIVKNYP--------KDIKA----FYMRM--- 370

Query: 467 ESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
                ND     A   D++  G  EI  G  R    +++      +G+         G  
Sbjct: 371 -----NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDILDARMIEMGLDP----EHMGWY 420

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
               + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 421 RDLRRYGSVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|148979117|ref|ZP_01815325.1| asparaginyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145961983|gb|EDK27272.1| asparaginyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 466

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 66/384 (17%), Positives = 123/384 (32%), Gaps = 48/384 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNN----LNNYENEVLKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A   +++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPAKGQDFELAATDFKVVGWVEDAETYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++  +     
Sbjct: 132 NVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTE 191

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +    Y +                    A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 KGDVDYNEDFFGKETFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            E++F + +DI    E++L+ VF+           F                      ++
Sbjct: 252 PEVAFADLEDIAKLSEDMLKFVFKAVLEECRDDLEFFAQRIDKEAITRLEQFVTSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG-G 336
            Y DAI+       +   P+         + SE   F           V   P       
Sbjct: 312 DYTDAIQILLDSGREFEFPVEWG----IDMSSEHERFLAEEHFKAPVIVKNYPKNIKAFY 367

Query: 337 NRAFCDRMNEWARSQGQPGLAYIF 360
            RA  D     A     PG+  I 
Sbjct: 368 MRANDDGKTVAAMDVLAPGIGEII 391



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 6/102 (5%)

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           ++ ND     A   D++  G  EI  G  R    +++ +    VGI              
Sbjct: 368 MRANDDGKTVA-AMDVLAPGIGEIIGGSQREERLDILDERMREVGIDP----EHMNWYRD 422

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 423 LRKYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|219127934|ref|XP_002184180.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404411|gb|EEC44358.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 537

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 58/272 (21%), Positives = 122/272 (44%), Gaps = 23/272 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC------FEIAKSVR 66
           G     + V ++G +  VR  G + F D+R      Q++++  S        F+I ++++
Sbjct: 51  GAKLEDTIVSIAGRIVSVRGQGKLYFYDLRGDGTKVQIMSDLKSYAAGEEAFFKIHRTIK 110

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----YPE 122
              ++ + G    R  ++       G++ +   +I++LS    +     G+         
Sbjct: 111 RGDIVGVKG----RPGKS-----KKGELSIFPIEIQLLSPCLHMLPFPKGDSNLGGITNM 161

Query: 123 SIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDF 180
             R++ R+LDL  +  + K    R ++IN +R  +   +F+E  TP++        AR F
Sbjct: 162 ETRYRQRYLDLIVNADVRKTFEIRAKVINKIRKYLDERHFLEVETPMMNMIPGGAVARPF 221

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          + L  AP+ Y ++L+  G DR ++I   FR+E       P EF  L+  
Sbjct: 222 VTYHNDLSMDLF-LRIAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNP-EFTTLEFY 279

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN 272
           M++V+ +D+++  E ++  + +E +    +  
Sbjct: 280 MAYVDYNDLMDMCEELVSSMVKEITGDYKIKY 311



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 4/93 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              ++++   G E+ +     +      + F     +    +N           A + G+
Sbjct: 416 LTERFEMFAAGRELVNAYTELNDPVTQYKLFLEQAKAGSAGDNEAMVMDDSFVTALEHGL 475

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG   G+DR+ M L    N++EV LFP  +
Sbjct: 476 PPTGGFGLGVDRLTMFLSNKNNIKEVLLFPAMK 508


>gi|146419551|ref|XP_001485737.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 587

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 55/302 (18%), Positives = 115/302 (38%), Gaps = 20/302 (6%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIA----KSVRSEWVLCI 73
            +++SG +   R  G  + F  ++ D   +  +    D A  E      + +R   V+ +
Sbjct: 127 EIKVSGRIMGKREAGSKLKFYVLKGDGVQVQVMAQAQDVALAEEYAKMHEYLRRGDVIGV 186

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G        T  A    G++ + A  +++L+      LP        +  R++ R+LDL
Sbjct: 187 TGY----PGRTNPAKGGEGELSVFATSVQLLTPCL-HMLPTEHFGFKDQEARYRKRYLDL 241

Query: 134 RRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             + ++      R++II  +R  + + +FIE  TP++   +        +    +     
Sbjct: 242 IMNDSVRDRFKVRSKIIGFIRDFLDSRDFIEVETPMMNVIAGGATAKPFITHHNDLNMDM 301

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +  AP+ + + L+  G DR ++I   FR+E       P EF   +   ++ +  D+++ 
Sbjct: 302 FMRVAPELFLKELVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVYDLMDM 360

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            E +   + ++ +          +I Y            D   P    N+ E        
Sbjct: 361 TEVLFSEMVKKITGDY-------KITYHPEGLEGKAMTLDFSRPWKRINMIEELEKVYNV 413

Query: 313 VF 314
            F
Sbjct: 414 KF 415



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 6/111 (5%)

Query: 459 FTMPQGGMESLKGNDLLSI--KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F      M S        I     ++++     EI +     +      Q F      K 
Sbjct: 467 FIFGHPQMMSPLAKKDRKIPGLCERFEVFVATKEICNAYTELNDPFDQRQRFEEQAKQKA 526

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             ++           A + G+PP  G   GIDR+ M L  +  +REV LFP
Sbjct: 527 QGDDEAQLVDETFCNALEYGLPPTAGWGCGIDRLAMFLTDSNTIREVLLFP 577


>gi|311693659|gb|ADP96532.1| lysyl-tRNA synthetase [marine bacterium HP15]
          Length = 511

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 64/307 (20%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   +  +L    +G  V ++G +   R    ++    +D  G  Q+ A+ D     + 
Sbjct: 50  KYGEKTKEEL--ESLGIKVAIAGRMMLDRKAFKVV----QDMTGRIQIYASKD-----VQ 98

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  +   +  I G+          +    G + ++  +  +L+ +   PLP   +     
Sbjct: 99  KDTKHWDLGDIVGV------RGTLSKSGKGDLYVTMDEYVLLTKSLR-PLPEKHKGLTDT 151

Query: 123 SIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R+++R++DL  +   + +   R++II++MR      +F+E  TP+L        AR F
Sbjct: 152 EARYRHRYVDLMVNEDSRRVFYARSKIISAMRQYFTDRDFMEVETPMLQVIPGGATARPF 211

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ + + L+  GF+R F+I   FR+E   +   P EF  ++  
Sbjct: 212 VTHHNALGIDMY-LRIAPELFLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMVEFY 269

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN------------------TVSNNFLRICYDDA 282
            ++ + +D+++  E++LR + ++                            F R+   DA
Sbjct: 270 QAYADYNDLMDLTEDMLRTITQKVLGTTTVVNSRTLADGSEETVEYDFGKTFERLTVVDA 329

Query: 283 IRRYGTD 289
           I RY  D
Sbjct: 330 ILRYNPD 336



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 65/166 (39%), Gaps = 8/166 (4%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
            P +    A+     +A++LGI     +    +     +E    E ++         P+ 
Sbjct: 338 KPEQLADDASA--RQVAKDLGIHLKEGWGLGKV-QIEIFE-ATAEHRLMQPTFITEYPKE 393

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                +  D       +++    G EIA+G    + +E   + F      K+  ++    
Sbjct: 394 VSPLARCKDSNPFVTERFEFFVGGREIANGFSELNDAEDQAERFQAQVAEKDAGDDEAMF 453

Query: 525 L----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                  A + G+PP  G   GIDR+ MLL  + ++R+V LFP  +
Sbjct: 454 YDEDYVMALEYGLPPTAGEGIGIDRLAMLLTNSPSIRDVILFPAMR 499


>gi|255319145|ref|ZP_05360363.1| lysyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262379277|ref|ZP_06072433.1| lysyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255303791|gb|EET82990.1| lysyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262298734|gb|EEY86647.1| lysyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 509

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 60/286 (20%), Positives = 111/286 (38%), Gaps = 32/286 (11%)

Query: 4   YRTHSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL     G             V ++G V   R      F+ I+D  G  Q+  
Sbjct: 47  KREHYAQDLQDLFAGKTKEEIEAGEKVYVSVAGRVMLNRGS----FIVIQDMTGRIQLYV 102

Query: 53  ---NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
                D       K +    ++ + G +  RS +        G + +  +  E+L+ +  
Sbjct: 103 ARKELDEQTLASIKGLDLGDIIAVKGYI-GRSGK--------GDLYVHIEHFELLTKSLR 153

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPI 168
            PLP          ++++ R+LDL  +   +     R +++  +R  + +E F+E  TP+
Sbjct: 154 -PLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRSYLNSERFMEVETPM 212

Query: 169 LTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           +        AR F           + L  AP+ Y + L+  GF+R F+I   FR+E   +
Sbjct: 213 MHVIPGGASARPFETHHNALDMPLF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVST 271

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
              P EF  ++   ++ +  D++   EN+L  +  +      V   
Sbjct: 272 RHNP-EFTMIEFYQAYADYKDLMQLTENMLEKLALDILGTTDVPYQ 316



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 5/129 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E K +         P       + N+       +++    G E+A+G    +   
Sbjct: 379 FEETVETK-LRQPTFITEYPAETSPLARRNNDNPHITDRFEFFIGGRELANGFSELNDPI 437

Query: 503 VMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F      K+  ++           A + G+PP  G   GIDR+VM+   A ++R+
Sbjct: 438 DQAERFQAQVEEKDAGDDEAMHYDAEFIEALEYGLPPTAGEGIGIDRLVMIFADAPSIRD 497

Query: 559 VSLFPMSQN 567
           V LFP  + 
Sbjct: 498 VILFPHMRR 506


>gi|323492435|ref|ZP_08097583.1| asparaginyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323313222|gb|EGA66338.1| asparaginyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 466

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 123/369 (33%), Gaps = 51/369 (13%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +        V    +    G
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNNLNNYEDEV----LKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPAKGQDFELAATDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++        
Sbjct: 132 NVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 191

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 KGDVDYNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + +D+    E++L+ VF+                            VS++F ++
Sbjct: 252 PEVAFADLNDVAKLSEDMLKYVFKAVLEERRDDLEFFAQRIDKEAITRLEQFVSSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y DAI+       +   P+            +     +       ++   I        
Sbjct: 312 DYTDAIQILLDSGREFEFPVEW--------GIDMSSEHERYLAEEHFKAPVIVKNYPKDI 363

Query: 338 RAFCDRMNE 346
           +AF  R+NE
Sbjct: 364 KAFYMRLNE 372



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 7/101 (6%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    EV+      +GI               
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLEVLDARMREMGIDP----EHMSWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 424 RRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|149721122|ref|XP_001488269.1| PREDICTED: similar to Asparaginyl-tRNA synthetase [Equus caballus]
          Length = 559

 Score =  177 bits (449), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 69/344 (20%), Positives = 127/344 (36%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + + G+
Sbjct: 136 GRRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLSDDLCQCYNGVVLSTESSVAVYGM 195

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 196 LNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 251

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R  +    R       + E + P L  +  EG       +   + +F  L Q
Sbjct: 252 NMSKILKARCIVTRCFRDHFFDRGYCEVTPPTLVQTQVEGGATLFKLNYFGEEAF--LTQ 309

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  +++LN +E++
Sbjct: 310 SSQLYLETCIP-ALGDVFCIAQSYRAEQSRTRRHLAEYSHVEAECPFLTFEELLNRLEDL 368

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 369 VCDVVDRVLKSPAASIVYDLNPNFKPPKRPFKRMNYSDAILWLKEHNIKKEDG-TFYEFG 427

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 428 EDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDSRLTE 471



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +S     +         L+ N  EI  G +R   SE ML  +  
Sbjct: 450 RFPVEIKSFYMQRCPEDSRLTESVDV-------LMPNVGEIVGGSMRIWDSEEMLAGYKR 502

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 503 EGIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCT 558

Query: 571 L 571
            
Sbjct: 559 P 559


>gi|313887156|ref|ZP_07820852.1| asparagine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|332300499|ref|YP_004442420.1| Asparaginyl-tRNA synthetase [Porphyromonas asaccharolytica DSM
           20707]
 gi|312923385|gb|EFR34198.1| asparagine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|332177562|gb|AEE13252.1| Asparaginyl-tRNA synthetase [Porphyromonas asaccharolytica DSM
           20707]
          Length = 471

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 103/276 (37%), Gaps = 27/276 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             V + GWV   R +  + F+ + D   +   Q+V +      ++ + + +   + + G 
Sbjct: 23  QPVCVKGWVRTKRGNKAVCFVALNDGSTVHNIQIVIDKAQTDPKLLEQITTGAAIGVVGT 82

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +++   +         + E+ A +I I   ++ +  P+  +    E +R +   L  R +
Sbjct: 83  LVASQGQG-------QEYEIQADEITIYGTSDPVRYPLQKKGHTLEFLR-EIAHLRPRTN 134

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------- 189
           T    +  R  +  ++        +    TPI+T+S  EGA      + ++         
Sbjct: 135 TFAAVLRIRHNMAYAIHTFFHERGYFYLHTPIITSSDAEGAGQMFTVTTLDMNKLPLAKD 194

Query: 190 -------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+    +     Q +  L A      +   P FR E+  + R   EF+ ++ 
Sbjct: 195 GSVDYSKDFFGKHTSLTVSGQLEGELGAMALGGIYTFGPTFRAENSNTPRHLAEFWMVEP 254

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           E++F++ +   +  E   +   +   +       FL
Sbjct: 255 EVAFMDNEGNQDLAEAFTKHCLQWALDHCMDDLEFL 290



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 71/228 (31%), Gaps = 25/228 (10%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406
           +  ++G   LA  F +      +       + L     + +  R+        F +    
Sbjct: 258 FMDNEGNQDLAEAFTKHCLQWALDHCMDDLEFLAEHYDKELIERIR-------FVVERPF 310

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN---PFTMPQ 463
           ++       A    A   G      F   W  D        E ++     +   P  M  
Sbjct: 311 VRTTYTEGVAILEEAVRGG--KKFEFPVYWGAD-----LASEHERYLVEQHYNAPVIMTD 363

Query: 464 GGME----SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
              E     +K ND          L  +  EI  G  R    + +      VGI  + + 
Sbjct: 364 YPKEIKAFYMKQNDDGKTVRGMDVLFPHIGEIIGGSERETDIDKLTARAQEVGIKDKDLW 423

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                     + G  PH G   G +R+++ + G  N+R+V  FP + N
Sbjct: 424 ----WYLDTRRYGSAPHAGFGLGFERLLLFVTGMTNIRDVIPFPRTPN 467


>gi|296216963|ref|XP_002754814.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           [Callithrix jacchus]
          Length = 477

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 55/251 (21%), Positives = 110/251 (43%), Gaps = 18/251 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V++ GWV  VR    ++FL + D   +  +    DS+    ++ +     + + G +
Sbjct: 41  GERVKVQGWVRSVRSQKEVLFLHVNDGSSLESLQVVADSSL--DSRELTFGSSVEVQGQL 98

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +   ++  N       +EL A+ I+++   +    P+  +  +P     +Y  L  R + 
Sbjct: 99  VKSPSKRQN-------VELKAENIKVIGNCDAKTFPIRYKERHPLEYLRQYPHLRCRTNI 151

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-----RVNQGSFY 192
           L   +  R+    ++        F+   TPI+T++  EGA +          ++ + +F+
Sbjct: 152 LGSILRIRSEATAAIHSFFKDNGFVHIHTPIITSNDCEGAGELFQLEAAGKIKIPEENFF 211

Query: 193 ---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
              A      Q    +M+  F + F   P FR E+ +S R   EFY ++ E+SFV+   D
Sbjct: 212 NVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVDSLQD 271

Query: 249 ILNTMENVLRG 259
           ++  ME + + 
Sbjct: 272 LMQVMEKLFKA 282



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 25/137 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             +++++P             A  PF M                 A   DL+  G  E+ 
Sbjct: 363 PVFVINYPL------------ALKPFYMRDNED------GPQHTVA-AVDLLVPGVGELF 403

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            GG+R      + +  +   +++      +       + G  PHGG   G +R +  +LG
Sbjct: 404 GGGLREERYHFLEERLARSRLTEV-----YQWYLDLRRFGSVPHGGFGMGFERYLQCILG 458

Query: 553 AKNVREVSLFPMSQNFC 569
             N+++V  FP   + C
Sbjct: 459 VDNIKDVIPFPRFPHSC 475


>gi|229492238|ref|ZP_04386046.1| putative lysyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229320864|gb|EEN86677.1| putative lysyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 1118

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 62/256 (24%), Positives = 112/256 (43%), Gaps = 10/256 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      S  G+ VR++G + RVR +GG++F D+RD  G  QV+ + D+   E     
Sbjct: 663 THTIAAAAKSPEGTRVRIAGRLLRVRDYGGVVFTDVRDWSGDIQVLVDQDNVGREKLAEF 722

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +E+ L   G ++  S     +    G++ L A +  +       PLP   +       R
Sbjct: 723 AAEFDL---GDLIEVSGTIGRSR--KGELSLIAVEWRMNGKCL-HPLPDKWKGLSDPETR 776

Query: 126 FKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
            + R+LD+       + +  R+ ++ S+R  +    ++E  TPIL        A  FL  
Sbjct: 777 VRQRYLDIALNPKARELLEARSAVVKSLRDSLGGRGYLEVETPILQQVHGGANAAPFLTH 836

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L  +G ++ F+I   FR+E       P EF  L+   + 
Sbjct: 837 INAYNLDLY-LRIAPELYLKRLCVAGMEKVFEIGRVFRNEGVDFKHNP-EFTILEAYEAH 894

Query: 244 VEQDDILNTMENVLRG 259
            + + ++     +++ 
Sbjct: 895 SDYEGMMRMCRELIQA 910



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 56/154 (36%), Gaps = 21/154 (13%)

Query: 422  QELGIINCNCFEFCW--IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
             + G I    +E       +FP +  N        + +P T P   +            A
Sbjct: 980  WDTGAIAQEMYEHLVEDYTEFPTFYTN-----FPTSMSPLTRPHRSIP---------GVA 1025

Query: 480  FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPP 535
             ++DLV  G E+ +               +   +                 +A +  MPP
Sbjct: 1026 EKWDLVAWGVELGTAYSELTDPVDQRNRLTEQSMLAAGGDPEAMELDEDFLQALEHAMPP 1085

Query: 536  HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             GG+  G+DRIVML+ G  ++RE   FP+++   
Sbjct: 1086 TGGLGMGVDRIVMLITG-GSIRETLAFPLAKPRQ 1118


>gi|328788617|ref|XP_623936.2| PREDICTED: lysyl-tRNA synthetase [Apis mellifera]
          Length = 587

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 94/552 (17%), Positives = 159/552 (28%), Gaps = 111/552 (20%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
            ++G VH +R  G  +IF D+R      QV+AN      E  +    +      G ++  
Sbjct: 114 SIAGRVHAIRESGAKLIFFDLRGEGVKIQVMANARHYKNE--EKFTPDISKIRRGDIIGV 171

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLH 139
                      G+  +    I +LS      LP        +  RF+ R+LDL   D + 
Sbjct: 172 VGNP--GKTKKGEFSIMPHSIILLSPCL-HMLPNLYFGLKDKETRFRQRYLDLILNDKVR 228

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAP 198
           K    R +I+  +R  +    F+E  TP++        A+ F+          Y +  AP
Sbjct: 229 KTFHIRAKIVAYVRKFLDELGFLEVETPMMNIIPGGATAKPFITHHNELNMDLY-MRIAP 287

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++                                           
Sbjct: 288 ELYLKMLVIGGLDRVYE------------------------------------------- 304

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
            +  +F N      +       +    Y              +  +    +E  +   I 
Sbjct: 305 -IGRQFRNEGIDLTHNPEFTTCEFYMAYA-------------DYNDLMSITEDMISGMIK 350

Query: 319 SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKH 378
           S++  Y++   P    G          E       P    +         +    P A  
Sbjct: 351 SIHGSYKITYHPDGPEG----------EAVEIDFTPPFKRLSMIKTLEEVLKIKLPSADK 400

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
           LN   T  I   L  +           P                    I   C    +I+
Sbjct: 401 LNNSETNQILNDLCTKYE----IECPPPRTTARLLDKLVGEF------IEETCINPTFIL 450

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D                 +P  M                   +++L     EI +     
Sbjct: 451 D-----------------HPQIMSPLAKWHRSEQ----GLTERFELFIMKKEICNAYTEL 489

Query: 499 HMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +   +  + F      K   +            A + G+PP  G   GIDRI M L  + 
Sbjct: 490 NDPIIQRERFEEQAKDKAAGDEEAQVVDETFCTALEYGLPPTAGWGMGIDRITMFLTDSN 549

Query: 555 NVREVSLFPMSQ 566
           N++EV LFP  +
Sbjct: 550 NIKEVLLFPQMK 561


>gi|307200232|gb|EFN80526.1| Lysyl-tRNA synthetase [Harpegnathos saltator]
          Length = 584

 Score =  177 bits (448), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 105/263 (39%), Gaps = 8/263 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G + V     ++G VH +R     +IF D+R      QV+AN      E  +   ++   
Sbjct: 103 GETLVDEVHSIAGRVHSIRGASAKLIFFDLRGEGVKVQVMANARIYRDE--EKFATDTSK 160

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++             G+  +    I +LS      LP        +  R++ R+L
Sbjct: 161 IRRGDIIGVVGNP--GKSKKGEFSIMPHSITLLSPCL-HMLPHLHFGLKDKETRYRQRYL 217

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL   + + +    R +II  +R  +    F+E  TP++   +        V        
Sbjct: 218 DLIINNRVRQIFHIRAKIIAYIRSYLDKLGFLEVETPMMNMIAGGATAKPFVTYHNELNM 277

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++
Sbjct: 278 ELFMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYMAYADYNDLM 336

Query: 251 NTMENVLRGVFEEFSNGNTVSNN 273
           +  E+++  + +       +  +
Sbjct: 337 SLTEDMVSSMVKAIHGTYKIVYH 359


>gi|325104262|ref|YP_004273916.1| lysyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324973110|gb|ADY52094.1| lysyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 572

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 105/258 (40%), Gaps = 9/258 (3%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             + L+G +   R  G   F++++D  G  Q     D  C    K++ +     +  +  
Sbjct: 52  KNISLAGRIMTRRIMGNASFVELQDATGRIQAYIRRDDVCPGEDKTLYNTVFKKLLDIGD 111

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKYRFL 131
               +       TG+I +   + ++LS + +    V  + +           +R++ R++
Sbjct: 112 YIGIKGYVFTTQTGEISIHVTEFKVLSKSLKPLPIVKRDDDGNIYDGFTDPEMRYRMRYV 171

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL  +  +K I K R+++I++MR    A  ++E  TPIL A     A             
Sbjct: 172 DLTVNPEYKEIFKTRSKVISTMRSYFDANGWMEVETPILQAIHGGAAARPFNTYHNTLDM 231

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  A + Y + L+ +GFD  ++    FR+E       P EF  +++ +++ +   ++
Sbjct: 232 PLFLRIANELYLKRLIVAGFDGVYEFGKMFRNEGMDRTHNP-EFTSMEIYVAYKDYIWMM 290

Query: 251 NTMENVLRGVFEEFSNGN 268
             +E  L  V        
Sbjct: 291 GMVEECLEKVTMAIHGKT 308



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
             +  N  +  +I D+P      E   +   H                        +++L
Sbjct: 375 DKVEHNLIQPTFITDYPI-----EMTPLAKKHR----------------TEDGLVERFEL 413

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIA 540
              G EIA+     + +    + F          ++          R+ + GMPP  G+ 
Sbjct: 414 FVQGKEIANAYSELNDAIDQKERFEEQLKLAARGDDEAMVMDDDFVRSLEYGMPPTAGLG 473

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VML+    +++EV  FP  +
Sbjct: 474 IGIDRLVMLMTNQSSIQEVLFFPQMR 499


>gi|255524356|ref|ZP_05391313.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296187481|ref|ZP_06855876.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255511913|gb|EET88196.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048003|gb|EFG87442.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 427

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 120/262 (45%), Gaps = 18/262 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
                  V + GWVH+V       F+ +RD  GI Q+V        E+ K +R E  L +
Sbjct: 10  KESASDEVLVKGWVHKVIDFKNFGFVHLRDKTGIIQLVV-----GKELLKGLRLEMSLEV 64

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP---VFGEREYPESIRFKYRF 130
            G  ++            G IEL  +++++L       LP      +       +  YR+
Sbjct: 65  VGTKVANEK-------APGGIELQVKELKVLGKTYYDKLPITVNERKSSAHLETQLDYRY 117

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           + LR          +  I+ + R  ++  +F E  TP +  +S EG  +    +  ++ +
Sbjct: 118 ISLRNPKTRAAFKVQQEIVTAFREYLLQNDFSEIHTPKILGASTEGGSEVFTINYFDKRA 177

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDI 249
           F A  Q+PQ +KQ+++ +GF++ F+IAP +R E   + R   E+  LD+EM F+ +++DI
Sbjct: 178 FLA--QSPQFFKQMMVGAGFEKVFEIAPAYRAELHNTYRHLNEYISLDLEMGFIKDENDI 235

Query: 250 LNTMENVLRGVFEEFSNGNTVS 271
           ++  E  +R +F+         
Sbjct: 236 MDLEEGFMRHLFQHLRKTCQKE 257



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 4/121 (3%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K D      T        +            +DL+  G EI +GG R H  E++ +    
Sbjct: 311 KYDSDFVFLTAYPVKKRPMYAMPDEDGMTKSFDLIYKGLEITTGGQRIHDYEMLKENIKK 370

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +       +G    +F+ GMPPHGG+A G++RI M +L   N+RE +L P      +
Sbjct: 371 FGFNP----EDYGFYLESFRYGMPPHGGLAIGLERITMKILNLSNIREATLLPRDMKRLE 426

Query: 571 L 571
            
Sbjct: 427 P 427


>gi|127512828|ref|YP_001094025.1| asparaginyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166231675|sp|A3QE68|SYN_SHELP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|126638123|gb|ABO23766.1| asparaginyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 466

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 70/389 (17%), Positives = 123/389 (31%), Gaps = 58/389 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVL 71
           VGS V + GWV   R    GI FL + D      +      + D+   EI +      V+
Sbjct: 16  VGSQVTVRGWVRTRRDSKAGISFLAVYDGSCFDPIQGVVPNSLDNYNDEILRLTAGCSVV 75

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++    +           E+   K+E+    E+        + +      +   L
Sbjct: 76  M-TGELVESPGKGQA-------FEMQVTKVEVTGWVEDPDTYPMAAKRHSIEHLRELAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--- 188
             R + +      R  + +++      E FI  STP++TAS  EGA +    S ++    
Sbjct: 128 RPRTNIIGAVARVRNCLSHAIHNFYNEEGFIWVSTPLITASDCEGAGEMFRVSTLDLENL 187

Query: 189 -----------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRTDDGKVDFSEDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ E++F + +D+    E +L+  F    N       F                    
Sbjct: 248 WMVEPEVAFADLNDVAGLAERMLKYCFRAVLNERRDDLEFFAQRVDKTVIERLESFVNSD 307

Query: 276 --RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
             ++ Y DAI    +        +   +   +EH  +     F   + V    +      
Sbjct: 308 FAQVDYTDAIEILKSCGKKFEFDVEWGIDLQSEHERYLAEEHFKAPVVVKNYPKDI---- 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 364 -KAFYMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 7/101 (6%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      +G+SK      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGAQREERLDVLDTRLDEMGLSK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            + G  PH G   G +R+V  + G  N+R+V  FP +    
Sbjct: 424 RRYGTVPHSGFGLGFERLVSYVTGVSNIRDVIPFPRAPKSA 464


>gi|326799815|ref|YP_004317634.1| lysyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326550579|gb|ADZ78964.1| Lysyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 572

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 57/334 (17%), Positives = 125/334 (37%), Gaps = 22/334 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             + ++G +   R  G   F +++D  G  QV    D  C    K++ +     +  +  
Sbjct: 53  KNISIAGRMMSRRVMGSASFFELQDSTGRIQVYLTRDELCPTEDKTLYNTVFKKLLDIGD 112

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GEREYPESIRFKYRFLD 132
               +       TG I + A ++ +L+ + +    V        +       R++ R++D
Sbjct: 113 FVGVKGHVFTTQTGTISIHATELTLLAKSLKPLPIVKEADGKVFDAVTDPEFRYRQRYVD 172

Query: 133 LRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   +    K T+I +++R  +  +  IE  TP+L +      AR F+         
Sbjct: 173 LVVNPHVRETFTKVTKIKSAIRQFLDEQGAIEVDTPVLQSIPGGAAARPFITHHNALDIP 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  G+D  ++ +  FR+E       P EF  L+  +++ +   ++
Sbjct: 233 LY-LRIANELYLKRLIVGGYDWVYEFSRNFRNEGMDRTHNP-EFTVLEFYVAYKDYLWMM 290

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           +  E +   V    +   T++     I +    +R           I +++  +     +
Sbjct: 291 DITEQLFEKVALATNGKTTITVGDKEINFAAPYKR-----------ISIYDAIKEHAGFD 339

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                ++  +    +   IP     G     D +
Sbjct: 340 VSGLDEV-GLRDVCKQLHIPVDESMGKGKLIDEI 372



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+A+     +     L+ F
Sbjct: 378 EHHFIQPTFIIDYPVEMSPLTKKHRSKEGLVERFELMVNGKELANAYSELNDPIDQLKRF 437

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +     E  ++          RA + GMPP  GI  GIDR+ ML+    ++++V  FP 
Sbjct: 438 EDQLKLMERGDDEAMFIDYDFLRALEYGMPPTSGIGIGIDRLAMLMTNQASIQDVLFFPQ 497

Query: 565 SQ 566
            +
Sbjct: 498 MR 499


>gi|310659724|ref|YP_003937445.1| aspartyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308826502|emb|CBH22540.1| aspartyl-tRNA synthetase [Clostridium sticklandii]
          Length = 429

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 78/360 (21%), Positives = 142/360 (39%), Gaps = 36/360 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R       +L  S +   V +SGWVHR+R  G I F+ +RD  G+ Q V +  +    
Sbjct: 1   MKRI---MIAELS-SYLNQEVVVSGWVHRLRKLGKIAFIILRDKSGLVQCVIDTKTI--- 53

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K ++ E V+ I G V     ++ +       +E+    I++LS A E       +   
Sbjct: 54  DIKDLKLEAVIKIKGKVKLAQGKSES-------LEIQVISIDMLSPAHEDLPIEINKENM 106

Query: 121 P--ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                +    R L LR   L   +  +  +  +    +I  +F +  TP + A   EG  
Sbjct: 107 DISLDVMLNNRALSLRNPKLGAVLKVKAVLAQAFSDFLIKNDFTQIFTPKIVAQGTEGGS 166

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +    +     ++ A  Q+PQ YKQ+++ +GF+R F+I   +R E   + R   E+  LD
Sbjct: 167 NLFELNYFETKAYLA--QSPQFYKQIMVGAGFERVFEIGHVYRAESHDTKRHLNEYVSLD 224

Query: 239 MEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFL--------------RICYDDAI 283
           +E  F+ ++ +I+     +L  + +E  +  +     L              ++    +I
Sbjct: 225 VEFGFIQDEYEIMELENRLLDFMMKEVESKCSRELELLGAQLPKVPSEIPKMKLSEAISI 284

Query: 284 RRYGTDKPDLRNPII---MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
                +  DL+  +       ++E+        F  I               G G  R+F
Sbjct: 285 LNQKYNLNDLQTDLSPKGEKLISEYIKGEYNSDFVFITHYPQSKRPMYTMPYGEGETRSF 344



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 60/134 (44%), Gaps = 26/134 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F +I  +P                 +TMP G  E              +DL+  G EI 
Sbjct: 317 DFVFITHYP-----------QSKRPMYTMPYGEGE-----------TRSFDLLFRGLEIT 354

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H    +L+  +  G+SK     +F      F+ GMPPHGG A G++RI  +LLG
Sbjct: 355 TGGQRIHDYTQLLENIAKRGLSK----EQFKDYLYIFKYGMPPHGGFAIGLERITSMLLG 410

Query: 553 AKNVREVSLFPMSQ 566
             NVR  S FP  +
Sbjct: 411 FDNVRYASAFPRDK 424


>gi|290473854|ref|YP_003466728.1| asparagine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289173161|emb|CBJ79934.1| asparagine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 466

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 76/427 (17%), Positives = 140/427 (32%), Gaps = 64/427 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVLC 72
           V S V + GWV   R    GI FL + D      V A  +S           + +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFNPVQAVVNSNLPNYQDEVLYLTTGCSVE 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G V++   +  N        EL A  + ++ + ++        + +      +   L 
Sbjct: 76  ITGTVVASQGKGQN-------FELQATNVVVVGMIDDPDTYPMAAKRHSIEYLREVAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ---- 188
            R + +      R  +  ++      + F   S+P++TAS  EGA +    S ++     
Sbjct: 129 PRTNLIGAVARVRHTLSQALHRFFHEKGFFWVSSPLITASDTEGAGEMFRVSTLDLQNLP 188

Query: 189 ----------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+   A      Q      A    + +   P FR E+  + R   EF+
Sbjct: 189 RTDKGDVDFSKDFFGREAFLTVSGQLNGEAYACALSKIYTFGPTFRAENSNTSRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            L+ E++F + +DI +  E +L+ VF+                            V ++F
Sbjct: 249 MLEPEVAFADLNDIASLAEEMLKYVFKAALEERADDLAFFAERVDNEVVSRLEKFVDSDF 308

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           +++ Y DAI           NP+            +     +       +E   I     
Sbjct: 309 IQLDYTDAIEILENCGQKFENPVFW--------GVDLSSEHERYLAEKHFEAPVIMKNYP 360

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
              +AF  RMNE        G       +   G    +G   +   +   +     +D+ 
Sbjct: 361 KDIKAFYMRMNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDMLDQRMEEMDLN 413

Query: 395 DGDSCFF 401
             D  ++
Sbjct: 414 KEDYWWY 420



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 72/222 (32%), Gaps = 20/222 (9%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH 419
           FW L+     A +  +A     +     +  L+ +  D  FF      +  S      + 
Sbjct: 247 FWMLEPEVAFADLNDIASLAEEMLKYVFKAALEERADDLAFFAERVDNEVVSRLEKFVDS 306

Query: 420 IAQELGIINC--------NCFE--FCWIMDFPFYEWNE---EEKKIDFAHNPFTMPQGGM 466
              +L   +           FE    W +D      +E    EK  +        P+   
Sbjct: 307 DFIQLDYTDAIEILENCGQKFENPVFWGVD--LSSEHERYLAEKHFEAPVIMKNYPKDIK 364

Query: 467 ESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
                 +         D++  G  EI  G  R    +++ Q    + ++K      +   
Sbjct: 365 AFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDMLDQRMEEMDLNK----EDYWWY 420

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
               + G  PH G   G +R+V  + G  NVR+V  FP +  
Sbjct: 421 RDLRRYGTVPHAGFGLGFERLVAYVTGVSNVRDVIPFPRTPR 462


>gi|50286523|ref|XP_445690.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524995|emb|CAG58601.1| unnamed protein product [Candida glabrata]
          Length = 553

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 81/385 (21%), Positives = 139/385 (36%), Gaps = 53/385 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSE- 68
           DL   D    V     VH  R  G  + FL +R    + Q +   D A  +I+K++    
Sbjct: 94  DLSKEDADKEVLFRARVHNTRQQGATLAFLTLRQQSSLIQALVKADKAGEKISKNMVKWA 153

Query: 69  ------WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
                  ++ + G+V        +A I    +E+   +I  +S   E    +  +    E
Sbjct: 154 GSLNLESIVLVRGIVKVVDEPIKSATI--QDLEIHVTQIHTISETPETLPILIEDASRSE 211

Query: 123 -------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                          R   R +DLR  T       +  +    R  +  + F+E  TP +
Sbjct: 212 AEAEAAGLPVVNLDTRLDNRVIDLRTVTNQAIFRIQHGVCALFREFLANKKFVEVHTPKM 271

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             ++ EG  +    +     ++ A  Q+PQ  KQ L+ + F++ F+I P FR E+  + R
Sbjct: 272 LGAASEGGANVFEVTYFKGKAYLA--QSPQFNKQQLIVADFEKVFEIGPVFRAENSNTHR 329

Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGN------------------TV 270
              EF  LDMEM+F E   ++L+ +  +   +F E                         
Sbjct: 330 HMTEFTGLDMEMAFEEHYHEVLDVLSELFVFLFTELKKRYAKEIELVRKQYPVEEFKLPK 389

Query: 271 SNNFLRICYDDAIRRY---GTDKPDL-----RNPIIMHNVTEHFVHSEFRVFSK-ILSVN 321
               +RI Y + I+     G D  D       N   +  +      ++F +  K  L + 
Sbjct: 390 DGKMVRITYKEGIQMLKEAGKDIGDFEDLSTENEKFLGKLVREKYDTDFYILDKFPLEIR 449

Query: 322 PGYEVWAIPAKGGGGNRAFCDRMNE 346
           P Y +          +  F  R  E
Sbjct: 450 PFYTMPDPEDPRYSNSYDFFMRGEE 474



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 12/119 (10%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K      PF TMP                +  YD    G EI SG  R H  +++++   
Sbjct: 443 KFPLEIRPFYTMPDPEDPRY---------SNSYDFFMRGEEILSGAQRIHDHKMLMERMK 493

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             G+  E  +         F  G PPH G   G++R+VM  L  KN+R  SLFP     
Sbjct: 494 VHGLDPE--DPGLKDYCDGFSYGCPPHAGGGIGLERVVMFFLDLKNIRRASLFPRDPKR 550


>gi|290998780|ref|XP_002681958.1| lysyl tRNA synthetase [Naegleria gruberi]
 gi|284095584|gb|EFC49214.1| lysyl tRNA synthetase [Naegleria gruberi]
          Length = 653

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 106/262 (40%), Gaps = 9/262 (3%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           + +Y +H   +  V +    V L+G +   RP G ++F  IR      QV++       E
Sbjct: 163 IKKY-SHLAAEQRVQE--ETVALAGRIITSRPTGKLVFYHIRAEGEDLQVMSGISDYA-E 218

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              + +    +   G ++  +          G++ +   KI +L+      LP       
Sbjct: 219 GEDAFKKVHSVLRRGDIIGING--FAGKSKKGELSIIPTKITLLTPC-FHMLPKEHYGLT 275

Query: 121 PESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            +  R++ R+LDL  +   +   V R++II  +R  +    F+E  TP++          
Sbjct: 276 NQDTRYRQRYLDLIMNKKSRDIFVTRSKIIAHLRTFLNERGFLEVETPMMNMIPGGANAR 335

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  +      +  +P+ Y + L+  G +R ++I   FR+E       P EF   + 
Sbjct: 336 PFTTYHNDLEMLLYMRISPELYLKQLVVGGLERVYEIGKNFRNEGIDLTHNP-EFTACEF 394

Query: 240 EMSFVEQDDILNTMENVLRGVF 261
            M++ + +D++   E +L  + 
Sbjct: 395 YMAYADYNDLMKITEELLSEMA 416



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 8/111 (7%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQC 531
            +   +++L+  G E+ +     +   +  + F +    K+  +N          ++ + 
Sbjct: 544 KVLTERFELMIIGKEVCNAYTELNQPFIQRERFEDQVAQKDAGDNEAQFMDEDFCKSLEY 603

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
           G+PP GG   G+DR+ M+L    N++EV LFP           +P+    E
Sbjct: 604 GLPPTGGWGIGLDRLTMILSNNYNIKEVILFP----AQKPEDNTPTEKPEE 650


>gi|254167277|ref|ZP_04874129.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197623540|gb|EDY36103.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 480

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 62/268 (23%), Positives = 120/268 (44%), Gaps = 21/268 (7%)

Query: 6   THSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           T+   ++       +G  V ++G ++ +R HG + F D+RD+    Q     D    E  
Sbjct: 31  TNYIEEIVKAPDEFMGKKVAVAGRLYALRFHGKVAFGDLRDNGSKIQGFFRMDVLGEEQY 90

Query: 63  KSVRSE----WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           K ++        L I G V              G++ + A++I++ S A    LP     
Sbjct: 91  KFLKKYVDRGDFLWIKGEV---------TRTKKGELSVLAEEIKLASKAL-YDLPHEWFG 140

Query: 119 EYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                 R++ R+LDL  +    +  +KR+ I   +R  +    F+E  TP+L        
Sbjct: 141 IEDTEKRYRQRYLDLMFNKDAFDTFIKRSIIEKEIRMFLWNRGFLEMETPVLQPVYGGAN 200

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+ F          +Y L  + + Y + L+  G+++ F+IA  FR+ED  +   P EF  
Sbjct: 201 AKPFKTHVNAIDRDYY-LRISDELYLKRLIVGGYNKVFEIAKDFRNEDIDTTHNP-EFTM 258

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEF 264
           +++  S+V+ +D+++  E +++ V ++ 
Sbjct: 259 IEIYQSYVDYNDMMDLTEEMIKHVAQKL 286



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   EE  I          +        +   +    +++L   G E+A+G    +  
Sbjct: 350 LFERVCEEDLIQPVFVIDHPRETTPLCKL-HRKDNRLIERFELYVGGVELANGYTELNDP 408

Query: 502 EVMLQAFSN----VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            +  + F        +  E           A + GMPP GG+  GIDR+ MLL G  +++
Sbjct: 409 LLQEKFFREEVERRTLGDEEAHQYDEDFIEALRWGMPPMGGVGIGIDRLTMLLTGNTSIK 468

Query: 558 EVSLFP 563
           EV LFP
Sbjct: 469 EVILFP 474


>gi|328950831|ref|YP_004368166.1| aspartyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451155|gb|AEB12056.1| aspartyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 426

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 76/305 (24%), Positives = 130/305 (42%), Gaps = 32/305 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
              VG  V L GW+H  R  GGI F+ +RD  G+ QVV           K    E  + +
Sbjct: 10  PQHVGERVTLMGWLHWRRDLGGIQFVLLRDRSGVVQVVLPGGG------KLPLQESSIRV 63

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YPESIRFKYRFL 131
            G V+             G +E+ A+ +E+LS A         + E         +YR++
Sbjct: 64  TGTVVESDK-------APGGLEVHAEGLEVLSPATAPTPVEIPKEEWRANPETLLEYRYV 116

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR +     +  +  ++   R  + A  F E  TP +  +  EG  +        Q ++
Sbjct: 117 TLRGEKARAPLQVQAALVRGFRKYLDAAGFTEVYTPKIVQAGAEGGTNLFPVEYFEQRAY 176

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDIL 250
            A  Q+PQ YKQ+L    ++R +++AP +R E+  + R   E+  LD+EM F+E  ++++
Sbjct: 177 LA--QSPQLYKQIL-VGVYERVYEVAPVWRAEEHATSRHLNEYLSLDVEMGFIESHEEVM 233

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL--RNPIIMHNVTEHFVH 308
                ++R + EE            R   + A+R  G + P +    P++ H      V 
Sbjct: 234 RLETELIRAMLEE-----------ARASAERALRLLGVELPPVPKEIPVLEHQEARRIVK 282

Query: 309 SEFRV 313
            E  +
Sbjct: 283 EELGI 287



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 59/157 (37%), Gaps = 22/157 (14%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           D  +   + LG      +   W+  F          +   +  PF               
Sbjct: 292 DLNDEAERALGAYVRERYGTDWV--F--------VHRYPESVRPFYTHPD--------PE 333

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
                  +DL+  G E+ SGG R H  E ++++    G+  +     F G    F+ GMP
Sbjct: 334 RPGLTRSFDLLFRGLEVTSGGQRIHRYEDLVESLQRHGLDPQA----FRGYLEVFKYGMP 389

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PHGG A G +R+   LLG  NVR    FP  ++    
Sbjct: 390 PHGGFAIGAERLTQKLLGLPNVRYARAFPRDRHRLAP 426


>gi|326800729|ref|YP_004318548.1| asparaginyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326551493|gb|ADZ79878.1| Asparaginyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 481

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 60/290 (20%), Positives = 116/290 (40%), Gaps = 30/290 (10%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAK 63
           T     L  +D G  V + GW+   R +    FL I D   +   QVV + ++      K
Sbjct: 4   TRIKELLNSTDFGKTVIVKGWIKTFRNNQ---FLAINDGSCLGNIQVVIDYENTDERTLK 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            + +   + ++G+++    +         ++E+ A +I IL  ++    P+  ++   E 
Sbjct: 61  RLTTGAAVSVEGVLIESLGKG-------QRVEVKASQISILGDSDPEKFPLQPKKHSLEF 113

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +   L  R +T +     R  +  ++        F+   TPI+T S  EGA +    
Sbjct: 114 LR-EIAHLRFRTNTFNAVFKVRNALSFAVHRFFNERGFVYIHTPIITGSDAEGAGEMFKV 172

Query: 184 SRVN--------------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           + ++              +  F+          Q +  L A  F   +   P FR E+  
Sbjct: 173 TTLDLDNPPRNDDGSINFKEDFFGKSTNLTVSGQLEGELAALAFGNIYTFGPTFRAENSN 232

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           + R   EF+ ++ EM+F E  D ++  E +L+ V     +  +    FL+
Sbjct: 233 TTRHLAEFWMIEPEMAFYELKDNMDLAEELLKHVIRYALDTCSEELEFLK 282



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 20/146 (13%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +  +   + D+P                 F M     +      + ++    
Sbjct: 352 HERYLVEKHFKKPVILTDYP------------ADIKAFYMRMNEPDEQGRKTVRAMDI-- 397

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R    ++++     + I  E +           + G  PH G   
Sbjct: 398 --LFPGIGEIVGGSQREERYDLLVNRMKEMHIPIEDM----NWFLDTRRFGSVPHSGFGL 451

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+V+ + G  N+R+V  FP + N
Sbjct: 452 GFERLVLFVTGMTNIRDVIPFPRTPN 477


>gi|310794842|gb|EFQ30303.1| lysyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 620

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 62/295 (21%), Positives = 119/295 (40%), Gaps = 16/295 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVV-----ANPDSACFEIAK-SV 65
           G  D    VR+   ++  R  G  + F DIR      QV+         S  FE     +
Sbjct: 128 GEHDKEKVVRVGARIYNKRASGNKLFFYDIRAEGVKVQVMAQAQEVREGSPSFEDQHIHL 187

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESI 124
           R   ++ I G     + ++       G++ + A +  +L+     LP   +G +++ E  
Sbjct: 188 RRGDIVGIIGYPGRTAPKSKIEKGEEGELSIFATEFVLLTPCLHTLPDEYYGFKDHEE-- 245

Query: 125 RFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           R + R+LDL  +    + ++ R+++I  +R      +FIE  TP++   +        V 
Sbjct: 246 RHRKRYLDLIMNDKSRQILITRSKMITYIRRFFDNRDFIEVETPMMGPIAGGATAAPFVT 305

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              +      +  AP+ Y + L+  G  R ++I   FR+E       P EF   +   +F
Sbjct: 306 HHNDLDMTMFMRIAPELYLKELVVGGLHRVYEIGRQFRNEGIDLTHNP-EFTTCEFYQAF 364

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            +  DI++  E ++ G+ +  + G     +         +     +KP  R  +I
Sbjct: 365 ADVYDIMDLTEELVSGLVKHLTGGYKTKFH----TQHGEVYEVNWEKPWKRFEMI 415



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 10/130 (7%)

Query: 444 EWNEEE--KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           E+ EE+         +P  M        +          +++      EI +     +  
Sbjct: 468 EYIEEQCVNPSFIFGHPQVMSPLAKYHRETP----GLCERFEAFVCKKEIVNAYTELNDP 523

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F      K+  ++           + + G+PP GG   GIDR+VM L    ++R
Sbjct: 524 FDQRLRFEEQARQKDQGDDEAQLIDENFCMSLEYGLPPTGGWGMGIDRMVMFLTDNYSIR 583

Query: 558 EVSLFPMSQN 567
           EV  FP  + 
Sbjct: 584 EVLAFPFMKE 593


>gi|332663266|ref|YP_004446054.1| Lysyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332332080|gb|AEE49181.1| Lysyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 510

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 58/319 (18%), Positives = 117/319 (36%), Gaps = 25/319 (7%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V L+G +  VR  G + F +++D  G  Q+  +           +    +  +     
Sbjct: 52  QTVALAGRMMVVREKGKVTFAELQDSSGRIQLYISRSDIADGENFDLYDVVLKRLLDFGD 111

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-------GEREY-----PESIRF 126
               +        G+I L  + + +LS +      V        GE E          R 
Sbjct: 112 YIGVKGFVFRTRMGEITLHVKSLTLLSKSLRPLPMVKTRVIEATGETEVYDAFTDPEQRH 171

Query: 127 KYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R++DL          + R+RII++MR     + ++E  TPIL       A        
Sbjct: 172 RMRYVDLTVNPQFKAAFITRSRIISAMRRFFDDKGWLEVETPILQPIHGGAAARPFQTHH 231

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                   +  A + Y + L+A GFD  ++I   FR+E       P EF  +++ +++ +
Sbjct: 232 NTLDMPLYMRIANELYLKRLIAGGFDGVYEIGKMFRNEGMDRTHNP-EFTAMEIYVAYKD 290

Query: 246 QDDILNTMENVLRGVFEEFSNGN----------TVSNNFLRICYDDAIRRY-GTDKPDLR 294
              ++  +E  L  +    ++ N            +  + R+   D+I+ Y G D  ++ 
Sbjct: 291 YYWMMEMVEQCLEHIARAINDNNPLIKFDQHEINYAGPYRRLTMYDSIKEYTGADISEMD 350

Query: 295 NPIIMHNVTEHFVHSEFRV 313
              +     +  +  +  +
Sbjct: 351 EAQLRDLCKQLHIEIDNSM 369



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV----GISKEVVENRFGGLYRAFQ 530
            +    +++L  NG EIA+     +      +   +                    RA +
Sbjct: 410 KAGLVERFELFVNGKEIANAYSELNDPIDQRERLEDQLTLAARGDHEAMAMDEDFLRALE 469

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GMPP  G+  GIDR+ M +     ++EV  FP  +
Sbjct: 470 YGMPPTSGLGIGIDRLTMFMTNNHTIQEVLFFPQMR 505


>gi|291287175|ref|YP_003503991.1| lysyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884335|gb|ADD68035.1| lysyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 489

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 57/325 (17%), Positives = 117/325 (36%), Gaps = 20/325 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G +  +R  G   F+ I+D  G  QV         E     ++  V  I G+      
Sbjct: 54  VAGRIMAMREFGKTAFMTIKDRTGSVQVYVKKGEISDEDHAIFKTSDVGDIIGI------ 107

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKN 141
           +       T ++ + A++ ++L+ A    LP           R++ R++DL  +  + + 
Sbjct: 108 KGFLFKTKTDELTICAKQYKMLTKALR-DLPEKWHGLKDVETRYRQRYVDLIVNDEVKET 166

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
             KR+ II  +R   I  +F+E  TP++                        L  AP+ Y
Sbjct: 167 FRKRSLIIQKVREFFIGRDFLEVETPMMHPIVGGATAKPFETHHNALDMPLFLRIAPELY 226

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+  GF+R F++   FR+E   +   P EF  ++   ++ +   +++ +E ++ G+ 
Sbjct: 227 LKRLVIGGFERIFELNRNFRNEGLSTRHNP-EFTMVEWYNAYNDYHGLMDMIEEMICGIA 285

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
              +    ++     +       R           + MH+           +     S  
Sbjct: 286 VSLNGKEKLTYKEKEMNLKRPWAR-----------MTMHDAICSMTDITPEMLKDRASAE 334

Query: 322 PGYEVWAIPAKGGGGNRAFCDRMNE 346
              +   I      G       + E
Sbjct: 335 AAAKKAGIHVDNSWGKGKIIMEIFE 359



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 27/157 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                 I +EL       F   +I+D+P                        +   K +D
Sbjct: 351 GKIIMEIFEELC--EHELFNPTFIIDYP-------------------KEVSPLAKSKADD 389

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAF 529
             +    +++L   GFE+A+G    +      + F     +KE  +           RA 
Sbjct: 390 PET--TERFELFMGGFELANGFNELNDPMDQKERFEKQVAAKEAGDEEAQMMDTDYIRAL 447

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + G+PP  G   GIDR+V+L   ++++R+V LFP  +
Sbjct: 448 EYGLPPTAGAGLGIDRLVILFTDSQSIRDVLLFPHMR 484


>gi|161598447|ref|YP_116617.2| lysyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 522

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 59/273 (21%), Positives = 113/273 (41%), Gaps = 20/273 (7%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPD 55
           RTHS  ++  +          G  V ++G V  +R  G + F  +++  G   Q + + +
Sbjct: 59  RTHSLAEIRAAHPDLAPDTQTGQQVGVAGRVIFLRNTGKLCFATLQEGDGTKLQAMISLN 118

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               +   + +++  L   G  +    E I +   TG++ + A    +   A+ L     
Sbjct: 119 GVGADALAAWKADVDL---GDFVFVHGEVIASR--TGELSVMADSWSM--AAKSLRPLPV 171

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL  R    +    R  ++ ++R  +    F+E  TP+L     
Sbjct: 172 AHKEMNEESRVRQRYVDLIVRPEARQMARTRVAVVRALRNALERRGFLEVETPMLQTLHG 231

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  G ++ F+I   FR+E   S   P E
Sbjct: 232 GAAARPFVTHSNALDMDLY-LRIAPELFLKRCVVGGLEKVFEINRNFRNEGADSTHSP-E 289

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           F  L+   ++   DD    +  +++ V +E   
Sbjct: 290 FAMLETYEAYGTYDDSATMIRELIQEVAQEALG 322



 Score = 80.9 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 38/194 (19%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           PV     +    AI  R+ ++  +   +  G               + +         + 
Sbjct: 356 PVTPETTVEELRAIAARVGLEIPEEKGYGHGK----------LVEELWEH--QYGDKLYA 403

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             ++ DFP               +P T                    ++DL   GFE+A+
Sbjct: 404 PTFVRDFP------------VETSPLTRQHRS---------KPGVTEKWDLYVRGFELAT 442

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVML 549
           G        +  + F +        ++           A + GMPP  G   GIDR++M 
Sbjct: 443 GYSELVDPVIQRERFVDQARLAAQGDDEAMVLDEDFLAAMEHGMPPTTGTGMGIDRLLMA 502

Query: 550 LLGAKNVREVSLFP 563
           L G   +RE  LFP
Sbjct: 503 LTGLG-IRETILFP 515


>gi|54309502|ref|YP_130522.1| asparaginyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|59798540|sp|Q6LPQ6|SYN_PHOPR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|46913938|emb|CAG20720.1| putative asparaginyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 466

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 127/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +      + V    +    G
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNELNNYQEEV----LKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A +++++ + E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPAKGQDFELAATEVKVVGLVEDPDTYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   S P++TAS  EGA +    S ++        
Sbjct: 132 NIIGAVARVRNCLSQAIHRFYHEQGFFWMSAPLITASDCEGAGEMFRVSTLDMANVPMTD 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 AGEVDYDKDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + DD     E++L+ VF+                            V+++F ++
Sbjct: 252 PEVAFADLDDAAKLAEDMLKYVFKAVLEERRDDLEFFAQRINKEAITRLEQFVTSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI+            +   +   +EH  +     F   + V    +          
Sbjct: 312 DYTDAIQILQDSGRKFEFDVEWGIDMSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRMNDDGKTVAAMDVLAPGIGEII 391



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 6/99 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    E + +  + +GI    +E          +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLEHLDKRIAEMGIDASHIE----WYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G  PH G   G +R+V  + G +N+R+V  FP +    
Sbjct: 426 YGTVPHSGFGLGFERLVTYVTGMQNIRDVIPFPRAPRSA 464


>gi|160902804|ref|YP_001568385.1| asparaginyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160360448|gb|ABX32062.1| asparaginyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 434

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 68/349 (19%), Positives = 122/349 (34%), Gaps = 29/349 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWV 70
              +   V   GWV   R  G I FL +RD  G  Q +A     D   FE  + ++ E  
Sbjct: 12  KKHINETVEFRGWVWNKRSSGKIAFLQLRDGTGFIQGIAEKKDFDDETFENIRKIKMESS 71

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +        N       +EL     + +   E +      ++E+      + R 
Sbjct: 72  IILQGTIKKDERSPEN-------VELHITSFKKIQ--EPIEDYPISKKEHGIDFLMENRH 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L +R       +  R  I+ ++R      NF    TPI T S  E A +       + G 
Sbjct: 123 LWIRSRRQFHILNIRNEILKAIRDFYNQNNFTLIDTPIFTGSIGESAGNTFKLDYFDYGE 182

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q  Q Y +   A  F + + + P FR E  ++ R   EF+  + E++F + +D +
Sbjct: 183 VY-LAQTGQLYLEAA-AMSFGKVYNLGPTFRSEKSKTRRHLIEFWMNEAEVAFYKHEDNI 240

Query: 251 NTMENVLRGVFEEFS---------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
              E+++  + +                      +   F R+ Y  AI        ++  
Sbjct: 241 KLQESLVSFIIKRVLENASDDLKEIGRDTNKLQKIQPPFERMTYTQAIDFLKKKGFEVEW 300

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                   E  + S+F     +       + + +       +   CD +
Sbjct: 301 GEDFGADEESVLASQFEKPLFVEKYPRKVKAFYMQPDENNPDVVLCDDL 349



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 33/157 (21%)

Query: 425 GIINCNCFEFCWIMDF--------------PFYEWNEEEKKIDFAHNPFTMPQGG--MES 468
             +    FE  W  DF              P +      +K       F M       + 
Sbjct: 289 DFLKKKGFEVEWGEDFGADEESVLASQFEKPLFV-----EKYPRKVKAFYMQPDENNPDV 343

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +  +DLL+ + +         EI     R     V++       +      +++      
Sbjct: 344 VLCDDLLAPEGYG--------EIIGASERIWEESVLIDRLKEFNLPL----DQYQWYIDL 391

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            + G  PH G   G++R V  + G +++RE   F  +
Sbjct: 392 RKFGSVPHSGFGLGVERTVAWICGLEHIREAIPFART 428


>gi|145222020|ref|YP_001132698.1| lysyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315446240|ref|YP_004079119.1| lysyl-tRNA synthetase (class II) [Mycobacterium sp. Spyr1]
 gi|254782477|sp|A4T5M9|SYK_MYCGI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|145214506|gb|ABP43910.1| lysyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315264543|gb|ADU01285.1| lysyl-tRNA synthetase (class II) [Mycobacterium sp. Spyr1]
          Length = 501

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 20/270 (7%)

Query: 5   RTHSCGDLGVS--------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTH+  +L  +          G  V ++G V   R  G + F  +++  G          
Sbjct: 38  RTHTLAELRQAYPDLEPDTKTGLKVGVAGRVIFARNSGKLCFATLQEGDGAQ---LQVMI 94

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +  E+ +     W   +D G ++    E I++    G++ + A   +I+S A        
Sbjct: 95  SFAEVGQESLDAWKADVDLGDIVFVHGEVISSR--RGELSVLADSWQIVSKALRPLP--V 150

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL  R        +R  ++ ++R  +    F+E  TP+L   + 
Sbjct: 151 AHKELNEETRVRQRYVDLIVRPEARTIARQRIAVVRAVRSALERRGFLEVETPMLQTLAG 210

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  GFDR F++   FR+E   S   P E
Sbjct: 211 GAAARPFVTHSNALDADLY-LRIAPELFLKRCVVGGFDRVFELNRNFRNEGADSTHSP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++   DD       +++ V +E
Sbjct: 269 FAMLETYQAYGTYDDSATVTRELIQEVADE 298



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 50/136 (36%), Gaps = 26/136 (19%)

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
           +   ++ DFP                P T P   +E             ++DL    FE+
Sbjct: 381 WAPTFVRDFP------------VETTPLTRPHRSIE---------GVTEKWDLYVRKFEL 419

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIV 547
           A+G        +  + F     +    ++           A + GMPP  G   GIDR++
Sbjct: 420 ATGYSELIDPIIQRERFEAQARAAAAGDDEAMALDEDFLAALEYGMPPTTGTGMGIDRLL 479

Query: 548 MLLLGAKNVREVSLFP 563
           M L G  ++RE  LFP
Sbjct: 480 MALTGL-SIRETVLFP 494


>gi|257784989|ref|YP_003180206.1| lysyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473496|gb|ACV51615.1| lysyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 533

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 69/374 (18%), Positives = 136/374 (36%), Gaps = 31/374 (8%)

Query: 10  GDLGVSDVGSFV-RLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSV 65
            DL     G  V  ++G V  +R  G I F+ + D+ G  Q+     N D   +E+   +
Sbjct: 81  ADLEDGQTGEEVYSVAGRVRAIRNQGKIAFVVVEDYTGQIQLFCRINNLDEKNWELLGLL 140

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
               ++   G +M             GQ+ L+   +E+LS +   PLP          +R
Sbjct: 141 DLGDIIGATGAIMRTRR---------GQLSLAVTSLEVLSKSLR-PLPEKFHGLTDREVR 190

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVP 183
           ++ R++DL  +   +++ + R++II+ +R  M A+ ++E  TP+L        A+ F+  
Sbjct: 191 YRQRYVDLIMNPEVRDVFRKRSQIISIIRQFMEADGYMEVETPVLQEILGGANAKPFITH 250

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  A +   + L+  G +R +++   FR+E       P EF  ++   ++
Sbjct: 251 YNALNTEDY-LRIATELPLKRLLVGGLERVYELGRQFRNEGTDLTHNP-EFTSMEAYAAY 308

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            +   +    +N+ + +  +                   +  Y   + DL     + ++ 
Sbjct: 309 SDLAGMRELSQNLFQEIARKTCGCEEG----------HEVITYQGTEVDLSGNWRVASLA 358

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRL 363
           E          S    V     V                 + E     G+  +    +  
Sbjct: 359 EIASEVTGEELSIDTPVEKLRAVLDRYEIEWNPEWQAGKLLFEIYDELGEKSIVNPTFVC 418

Query: 364 DESGNVAGMGPVAK 377
           D    V    P+ K
Sbjct: 419 DYPAEV---SPLTK 429



 Score =  102 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 81/231 (35%), Gaps = 33/231 (14%)

Query: 342 DRMNEWARS-----QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
           +   E AR      +G   + Y    +D SGN      +A+  + V  E + +   ++  
Sbjct: 320 NLFQEIARKTCGCEEGHEVITYQGTEVDLSGNWRVAS-LAEIASEVTGEELSIDTPVEKL 378

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
            +              A      I  ELG    +     ++ D+P               
Sbjct: 379 RAVLDRYEIEWNPEWQAGKLLFEIYDELG--EKSIVNPTFVCDYP------------AEV 424

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +P T  +     L           +++L+  G E A+     +      + F+    +K 
Sbjct: 425 SPLTKRKADDPRLTD---------RFELIICGAEYANAYSELNDPVDQEERFAAQMEAKR 475

Query: 517 ----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                         RA + GMPP GGI  GIDR++ML     ++R+V LFP
Sbjct: 476 QGDEEAMEYDYDFIRALEYGMPPAGGIGYGIDRMMMLFCDQPSIRDVLLFP 526


>gi|298372906|ref|ZP_06982896.1| asparagine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275810|gb|EFI17361.1| asparagine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 465

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 59/333 (17%), Positives = 120/333 (36%), Gaps = 34/333 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEW 69
           L   D G+ + + GWV   R +  + F+ + D   +   Q+V +      E  K + +  
Sbjct: 10  LERRDFGNEINVKGWVRTRRGNKNVSFVALNDGSTVNNIQIVVDVTKFPEEQLKLITTGA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L + G++     +  +       +E+ A++I +   A     P+  +    E +R    
Sbjct: 70  ALSVCGVLTESLGQGQS-------VEIQAREIVVYGTANPEEYPLQKKGHTLEYLR-DIA 121

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ- 188
            L  R +T       R ++  ++        F+   TPI+TAS  EGA      +  N  
Sbjct: 122 HLRPRTNTFGAIFRMRHQMAMAIHTFFHTRGFVYFHTPIITASDCEGAGQMFQVTTQNLY 181

Query: 189 -------------GSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                          F+  P A     Q +  L A      +   P FR E+  + R   
Sbjct: 182 NLKKDESGQIDYSSDFFGQPTALTVSGQLEGELGAMALGAIYTFGPTFRAENSNTPRHLA 241

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF+ ++ E++F+E ++ +   ++ ++               FL        + Y  +  D
Sbjct: 242 EFWMIEPEVAFIEIEENMQLAQDFVQFCVNWALEHCREDIEFL-------AKMYDNELID 294

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
               ++ ++           +  K ++    +E
Sbjct: 295 RLRFVVENDFVRLTYTEGIEILKKAVAKGKKFE 327



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 4/99 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +K ND          L     EI  G  R    E + +    +G+  + +          
Sbjct: 367 MKQNDDGKTVRAMDVLFPRIGEIIGGSQREEDYEKLRRRAEEMGVPTKDIW----WYLDT 422

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+++ + G +N+R+V  FP + +
Sbjct: 423 RRFGTAPHSGFGLGFERLMLFVTGMQNIRDVIPFPRTPH 461


>gi|149374725|ref|ZP_01892499.1| Lysyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149361428|gb|EDM49878.1| Lysyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 510

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 143/354 (40%), Gaps = 32/354 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y   S  +L  +++G  V ++G +   R    ++    +D  G  Q+ A+ D     + 
Sbjct: 49  KYGDKSKEEL--AEMGIQVAVAGRMMLDRKAFKVV----QDMTGRIQIYASKD-----VQ 97

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K  +   +  I G+        I      G + +S  +  +L+ +   PLP   +     
Sbjct: 98  KDTKHWDLGDIVGV------RGILCKSGKGDLYVSMDEYVLLTKSLR-PLPEKHKGLTDT 150

Query: 123 SIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R+++R++DL  +   + +   R++II+ MR      +F+E  TP+L        AR F
Sbjct: 151 EARYRHRYVDLMVNEDSRRVFYARSKIISVMRQYFTDRDFMEVETPMLQVIPGGATARPF 210

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ + + L+  GF+R F+I   FR+E   +   P EF  ++  
Sbjct: 211 VTHHNALGIDMY-LRIAPELFLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMVEFY 268

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ + +D+++  E++LR + ++     TV N       ++    Y     D   P    
Sbjct: 269 QAYADYNDLMDLTEDMLRTIAQKVLGTTTVVNTRTLSDGEEETIEY-----DFGKPFERL 323

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEWAR 349
            V +  +     + ++ L+        A        +G G  +   +     A 
Sbjct: 324 TVVDAILRYNPDIKAEQLADEASARQVAKDLGIHLKEGWGLGKVQIEIFEATAE 377



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 6/151 (3%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A++LGI     +    +     +E    E ++         P+      +  D  +   
Sbjct: 350 VAKDLGIHLKEGWGLGKV-QIEIFE-ATAEHRLMQPTFITDYPKEVSPLARCKDNDTFVT 407

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPP 535
            +++    G EIA+G    + +E   + F +    K+  ++           A + G+PP
Sbjct: 408 ERFEFFVGGREIANGFSELNDAEDQAERFQDQVAEKDAGDDEAMFYDEDYVMALEYGLPP 467

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             G   GIDR+ MLL  + ++R+V LFP  +
Sbjct: 468 TAGEGIGIDRLAMLLTDSASIRDVILFPAMR 498


>gi|254584945|ref|XP_002498040.1| ZYRO0G00726p [Zygosaccharomyces rouxii]
 gi|238940934|emb|CAR29107.1| ZYRO0G00726p [Zygosaccharomyces rouxii]
          Length = 552

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 66/298 (22%), Positives = 121/298 (40%), Gaps = 11/298 (3%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
             VG  V+++GW+HR+R +  ++F+ +RD YG  Q V   + A  +  + +  E  + + 
Sbjct: 124 ESVGQRVKVNGWIHRIRNNKKLVFVVLRDGYGFLQAVLTGNLALAKQTQELTLESSVALY 183

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFLD 132
           G V              G +ELS    E++ +A   E             S+    R L 
Sbjct: 184 GTVNKLPEG----KSAPGGVELSVDYYEVVGLAPGGEDAFTNKVSENADPSLLLDQRHLA 239

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +TL   +  R   +  +R     E   E + P +  +  EG       +   + +F 
Sbjct: 240 LRGETLSSMMKVRAIWMKCLRRFFENEGLTEVTPPCMVQTQVEGGSTLFKLNYYGEEAF- 298

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  +AS     + +   FR E   + R   E+  ++ E+ F++ DD+L+ 
Sbjct: 299 -LTQSSQLYLETCLAS-LGDVYCVQESFRAEKSHTRRHLSEYTHIEGELGFIDFDDLLSH 356

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           +E +              S    ++  D     Y   + D ++ +    + EH V +E
Sbjct: 357 LEKLFVETVGYIMEDPVGSAIVKQLNPDFKAPTYPFKRLDYKDALEW--LNEHGVPNE 412



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 41/121 (33%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F MP+   +      +         L+ N  EI  G +R      +L+ +  
Sbjct: 443 RFPAEIKSFYMPRCKDDPRVTESVDV-------LMPNVGEITGGSMRTWNEADLLEGYQR 495

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I        +       + G  PHGG   G +RI+  L     VR+ SL+P     C 
Sbjct: 496 EKIDHTP----YYWYLDQRKYGSVPHGGYGLGTERILAWLCNRYTVRDCSLYPRFTGRCK 551

Query: 571 L 571
            
Sbjct: 552 P 552


>gi|15229833|ref|NP_187777.1| ATKRS-1 (ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 1); ATP binding
           / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleic
           acid binding / nucleotide binding [Arabidopsis thaliana]
 gi|55583786|sp|Q9ZPI1|SYK_ARATH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|6041823|gb|AAF02138.1|AC009918_10 lysyl-tRNA synthetase [Arabidopsis thaliana]
 gi|4325324|gb|AAD17333.1| lysyl-tRNA synthetase [Arabidopsis thaliana]
 gi|20466171|gb|AAM20403.1| lysyl-tRNA synthetase [Arabidopsis thaliana]
 gi|25083918|gb|AAN72134.1| lysyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332641565|gb|AEE75086.1| Lysyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 626

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 56/361 (15%), Positives = 123/361 (34%), Gaps = 28/361 (7%)

Query: 8   SCGDLGVSD--VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           + G L   D    +   L+G +   R     + F D+       QV+A+   +  + A+ 
Sbjct: 125 TYGSLNNGDHVENAEESLAGRIMSKRSSSSKLFFYDLHGDDFKVQVMADASKSGLDEAEF 184

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----- 119
           ++         +V              G++ +  +   +LS    +              
Sbjct: 185 LKLHSNAKRGDIV---GVIGFPGKTKRGELSIFPRSFILLSHCLHMMPRKADNVNAKKPE 241

Query: 120 ---------------YPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIE 163
                            +  R++ R LD+  +  + +    R +II+ +R  +  +NF+E
Sbjct: 242 IWVPGQTRNPEAYVLKDQESRYRQRHLDMILNVEVRQIFRTRAKIISYVRRFLDNKNFLE 301

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             TP++   +   A    V    +      +  AP+ Y + L+  G +R ++I   FR+E
Sbjct: 302 VETPMMNMIAGGAAARPFVTHHNDLDMRLYMRIAPELYLKQLIVGGLERVYEIGKQFRNE 361

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
                  P EF   +  M+F + +D++   E +L G+ +E + G  +  N      D   
Sbjct: 362 GIDLTHNP-EFTTCEFYMAFADYNDLMEMTEVMLSGMVKELTGGYKIKYNANGYDKDPIE 420

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
             +      +     +  V +  +  +         +      + +            D+
Sbjct: 421 IDFTPPFRRIEMIGELEKVAKLNIPKDLASEEANKYLIDACARFDVKCPPPQTTARLLDK 480

Query: 344 M 344
           +
Sbjct: 481 L 481



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
            S    +++L  N  E+ +     +   V  Q F++    ++  ++           A +
Sbjct: 513 KSGLTERFELFINKHELCNAYTELNDPVVQRQRFADQLKDRQSGDDEAMALDETFCNALE 572

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVE 582
            G+ P GG   GIDR+ MLL  + N++EV  FP  +   +    + + ++ E
Sbjct: 573 YGLAPTGGWGLGIDRLSMLLTDSLNIKEVLFFPAMRPPQEESAAAQAPLTEE 624


>gi|161582007|ref|NP_230942.2| asparaginyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|229505118|ref|ZP_04394628.1| asparaginyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229511212|ref|ZP_04400691.1| asparaginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229518330|ref|ZP_04407774.1| asparaginyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229521407|ref|ZP_04410826.1| asparaginyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229608136|ref|YP_002878784.1| asparaginyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|255745693|ref|ZP_05419641.1| asparaginyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262159032|ref|ZP_06030144.1| asparaginyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|262169389|ref|ZP_06037081.1| asparaginyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|20139940|sp|Q9KSF9|SYN_VIBCH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|229341505|gb|EEO06508.1| asparaginyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229345045|gb|EEO10019.1| asparaginyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229351177|gb|EEO16118.1| asparaginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357341|gb|EEO22258.1| asparaginyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229370791|gb|ACQ61214.1| asparaginyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|255736768|gb|EET92165.1| asparaginyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262022202|gb|EEY40911.1| asparaginyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262029217|gb|EEY47869.1| asparaginyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 466

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 124/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 16  VDSEVTVRGWIRTRRDSKAGISFLAIYDGSCFNPIQAVVPNN----LNNYDNEVLKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPASGQAFELAASDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++  +     
Sbjct: 132 NVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 191

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                Y Q                    A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 AGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + + +    E++L+ VF+                            V ++F ++
Sbjct: 252 PEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARLEQFVESDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI            P+   +   +EH        F   + V    +          
Sbjct: 312 DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHFKAPVIVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRMNEDGKTVAAMDVLAPGIGEII 391



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 14/113 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M           D  ++ A   D++  G  EI  G  R    +++       GI   
Sbjct: 365 AFYMRMNE-------DGKTVAAM--DVLAPGIGEIIGGSQREERLDILDARMREFGIDP- 414

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                        + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 415 ---EHMDWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|226303560|ref|YP_002763518.1| lysyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|296439700|sp|C0ZL89|LYSX_RHOE4 RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|226182675|dbj|BAH30779.1| probable lysyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 1104

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 62/256 (24%), Positives = 112/256 (43%), Gaps = 10/256 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      S  G+ VR++G + RVR +GG++F D+RD  G  QV+ + D+   E     
Sbjct: 649 THTIAAAAKSPEGTRVRIAGRLLRVRDYGGVVFTDVRDWSGDIQVLVDQDNVGREKLAEF 708

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +E+ L   G ++  S     +    G++ L A +  +       PLP   +       R
Sbjct: 709 AAEFDL---GDLIEVSGTIGRSR--KGELSLIAVEWRMNGKCL-HPLPDKWKGLSDPETR 762

Query: 126 FKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
            + R+LD+       + +  R+ ++ S+R  +    ++E  TPIL        A  FL  
Sbjct: 763 VRQRYLDIALNPKARELLEARSAVVKSLRDSLGGRGYLEVETPILQQVHGGANAAPFLTH 822

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L  +G ++ F+I   FR+E       P EF  L+   + 
Sbjct: 823 INAYNLDLY-LRIAPELYLKRLCVAGMEKVFEIGRVFRNEGVDFKHNP-EFTILEAYEAH 880

Query: 244 VEQDDILNTMENVLRG 259
            + + ++     +++ 
Sbjct: 881 SDYEGMMRMCRELIQA 896



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 56/154 (36%), Gaps = 21/154 (13%)

Query: 422  QELGIINCNCFEFCW--IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
             + G I    +E       +FP +  N        + +P T P   +            A
Sbjct: 966  WDTGAIAQEMYEHLVEDYTEFPTFYTN-----FPTSMSPLTRPHRSIP---------GVA 1011

Query: 480  FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPP 535
             ++DLV  G E+ +               +   +                 +A +  MPP
Sbjct: 1012 EKWDLVAWGVELGTAYSELTDPVDQRNRLTEQSMLAAGGDPEAMELDEDFLQALEHAMPP 1071

Query: 536  HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             GG+  G+DRIVML+ G  ++RE   FP+++   
Sbjct: 1072 TGGLGMGVDRIVMLITG-GSIRETLAFPLAKPRQ 1104


>gi|254228139|ref|ZP_04921568.1| asparaginyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262393921|ref|YP_003285775.1| asparaginyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151939212|gb|EDN58041.1| asparaginyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262337515|gb|ACY51310.1| asparaginyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 472

 Score =  177 bits (448), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 69/384 (17%), Positives = 124/384 (32%), Gaps = 48/384 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +        V    +    G
Sbjct: 22  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNNLNNYEDEV----LKLTTG 77

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 78  CSVEVTGKIVESPAKGQDFELAATGVKVVGWVEDAETYPMAKTRHSIEYLREVAHLRPRT 137

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++        
Sbjct: 138 NVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 197

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 198 AGKVDYNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 257

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F E DD+    E++L+ VF+                          N VS++F ++
Sbjct: 258 PEVAFAELDDVAKLAEDMLKYVFKAVLEERRDDLEFFAQRIDKEAVSRLENFVSSDFAQV 317

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y DAI+       +   P+         + SE   F           V   P       
Sbjct: 318 DYTDAIQILLDSGREFEFPVEWG----IDMSSEHERFLAEEHFKAPVIVKNYPKDIKAFY 373

Query: 338 RAFCDR-MNEWARSQGQPGLAYIF 360
               D      A     PG+  I 
Sbjct: 374 MRMNDDGKTVAAMDVLAPGIGEII 397



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 6/99 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+      +GI                +
Sbjct: 377 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDTRMREMGIDP----EHMSWYRDLRR 431

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 432 YGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 470


>gi|302341786|ref|YP_003806315.1| asparaginyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638399|gb|ADK83721.1| asparaginyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 454

 Score =  177 bits (448), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 63/284 (22%), Positives = 105/284 (36%), Gaps = 20/284 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L  ++    V + GW    R   G++FL+I D   +   QV+   DSA +   
Sbjct: 3   RTRVRRALAATEALGLVLIRGWARTRRESKGLVFLEINDGSCLGNLQVLVAEDSAAWGGL 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             V +   L + G   +  A+           EL A+ + +L VA+    P+  +R   E
Sbjct: 63  GEVSTGAALEVVGRHQASPAKGQA-------WELHAEGLRVLGVADPESYPLQKKRHGDE 115

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R     L  R +        R R   ++        F    TPI+T S  EGA +   
Sbjct: 116 FLR-TIAHLRPRTNKYGAMFRIRARAALAVHEFFGQRGFCWVHTPIITGSDCEGAGEMFR 174

Query: 183 PSRVNQG------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            + +  G       F+   A      Q +    A      +   P FR E+  + R   E
Sbjct: 175 VTTLPPGEVDLAADFFGRQAGLTVSGQLEAEPFALALGDVYTFGPTFRAENSNTPRHAAE 234

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFS-NGNTVSNNFLR 276
           F+ ++ EM+F +  D +   E+  + +      +       F R
Sbjct: 235 FWMIEPEMAFADLADDMALAEDFTKDLTRRVLADCGEDLALFER 278



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           PF M Q        ND     A    LV    E+  G  R     V+      +G+    
Sbjct: 353 PFYMRQ--------NDDGRTVAAMDLLVPRVGELIGGSQREERLGVLEARMGELGL---S 401

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            E+ +       + G  PH G   G +R ++++ GA N+R+V  +P +  
Sbjct: 402 AEDYW-WYLDTRRFGSAPHAGFGMGFERFLLMITGAGNIRDVIAYPRTPR 450


>gi|150866122|ref|XP_001385612.2| Asparaginyl-tRNA synthetase, cytoplasmic (Asparagine--tRNA ligase)
           (AsnRS) [Scheffersomyces stipitis CBS 6054]
 gi|149387378|gb|ABN67583.2| Asparaginyl-tRNA synthetase, cytoplasmic (Asparagine--tRNA ligase)
           (AsnRS) [Scheffersomyces stipitis CBS 6054]
          Length = 553

 Score =  177 bits (448), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 61/309 (19%), Positives = 117/309 (37%), Gaps = 26/309 (8%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            ++ + V + GWVHR+R   G+ F+ +RD  G  Q V + D A     + +  E  + I 
Sbjct: 125 ENLETRVAVQGWVHRLRLQKGVAFITLRDGTGFIQAVLSGDLAKARQTQELTIESTVVIK 184

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFLD 132
           G++              G +EL A   E++ +A   +             S+    R L 
Sbjct: 185 GVISKLPEG----KSAPGGVELKADYYEVVGLAPSGDESFTNKAPENSDPSLLLDQRHLT 240

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +TL   +  R  ++ ++R     E  +E + P +  +  EG           + ++ 
Sbjct: 241 LRGETLSAVMKVRASLLRAIRRFFAEEGLLEVTPPCMVQTQVEGGSTLFKMDYYGEEAY- 299

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  +       + +   FR E   + R   E+  ++ E++F+E DD+L+ 
Sbjct: 300 -LTQSSQLYLETCLP-ALGDVYCVQESFRAEKSHTRRHLSEYTHIESELAFIEFDDLLSH 357

Query: 253 MENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +E ++    +                 +       FLR+ Y  A+               
Sbjct: 358 LERLITKTVQYVLEDEVAGPLIKQLNPDFQPPKTPFLRMEYIHALEWLNEHGIPNEEGEK 417

Query: 299 MH---NVTE 304
                ++ E
Sbjct: 418 FKFGDDIAE 426



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R +  + ++ A   
Sbjct: 444 RFPVEIKSFYMQKCKDDPRVTESVDV-------LMPNVGEITGGSMRTYDYDELIAAIKR 496

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             +      + +       + G  PHGG   G +RI+  L     VR+ SL+P     C 
Sbjct: 497 EKLDL----DSYYWFTDQRKYGTCPHGGYGLGTERILAWLCDRFTVRDCSLYPRFTGRCK 552

Query: 571 L 571
            
Sbjct: 553 P 553


>gi|194366365|ref|YP_002028975.1| asparaginyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194349169|gb|ACF52292.1| asparaginyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 464

 Score =  177 bits (448), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 117/385 (30%), Gaps = 54/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  VR    + F+++ D       QVVA    A F+  K + +   L   G
Sbjct: 17  GGEVTVRGWVRTVRGSANLAFVNVTDGSCFAPIQVVAGDALANFDEIKRLTTGCSLVATG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++    +  +        E+ A  +E++   E+        +        +   L  R 
Sbjct: 77  TLVKSQGKGQS-------FEIQASAVEVVGWVEDPLTYPIQPKPMTPEFLREVAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +        R  +  ++        F   STPI+T S  EGA      S ++        
Sbjct: 130 NLFGAVTRIRNCLAQAVHRFFHENGFNWISTPIITTSDAEGAGQMFRVSTLDMVNLPRDA 189

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q           + +   P FR E+  + R   EF+ ++
Sbjct: 190 QGGIDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHLAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F +  +     E  L+ +F    N                      + ++  F RI
Sbjct: 250 PEIAFADLAEDARLAEEFLKYLFRAVLNERGDDLAFIAERVDKNAITKLEDFINAPFERI 309

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+            P+   +   TEH         ++     P             
Sbjct: 310 DYTDAVSLLQKSGKKFDFPVEWGLDLQTEHERW-----LTEEHVGRPVVVTNYPEHIKAF 364

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 365 YMRLNDDGKTVAAMDVLAPGIGEII 389



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD-------ARNHIAQELGIINCNC 431
           L     + +   +  + GD   FIA    K      +        R      + ++  + 
Sbjct: 263 LAEEFLKYLFRAVLNERGDDLAFIAERVDKNAITKLEDFINAPFERIDYTDAVSLLQKSG 322

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKAFQYDLV 485
            +F + +++      E E+ +   H                  ++ ND     A   D++
Sbjct: 323 KKFDFPVEWGLDLQTEHERWLTEEHVGRPVVVTNYPEHIKAFYMRLNDDGKTVA-AMDVL 381

Query: 486 CNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
             G  EI  G  R    +V+    +  G+ +      +       + G  PH G   G +
Sbjct: 382 APGIGEIIGGSQREERLDVLDARMAQFGLDR----EHYSWYRDFRRYGSVPHAGFGLGFE 437

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCD 570
           R+V+ + G  N+R+   +P +    D
Sbjct: 438 RLVVYVCGLSNIRDAIPYPRAPGSAD 463


>gi|237751829|ref|ZP_04582309.1| lysyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229373195|gb|EEO23586.1| lysyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 506

 Score =  177 bits (448), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 63/290 (21%), Positives = 118/290 (40%), Gaps = 19/290 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             D  S + + G V  +R  G   F+ I D Y I Q+  + +    E+    +       
Sbjct: 53  KKDEDSKLWVKGRVKFLRLMGKASFIKIEDEYAILQIYFSQN----ELGDLFKILKKNLE 108

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +++           TG++ L A + +IL+ A  +PLP          +R++ R+LDL
Sbjct: 109 VGDIVNVYG--FPFVTKTGELSLHALEFKILTKA-IVPLPEKFHGLSDIELRYRQRYLDL 165

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   K   + R+ I++ +R     + F+E  TP+L        AR F+          
Sbjct: 166 IVNREVKETFRMRSAIVSCVRKFFENKGFLEVETPMLHPIPGGANARPFITHHNALDVER 225

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++    D++ 
Sbjct: 226 Y-LRIAPELYLKRLVVGGFEAVFEINRNFRNEGIDHSHNP-EFSMIEFYWAYHTYHDLIT 283

Query: 252 TMENVLRGVFEE--------FSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
             + +   + +         F +       F  + Y +++ + G    D+
Sbjct: 284 LTKELFDYLLDSLNLPKQLPFGDMLIDFTQFSVMTYRESLAKIGNIDKDI 333



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + ND  S  A +++    G E+A+G    +     L+ F
Sbjct: 370 ESKLINPTFITEYPIEISPLARRNDTHSNIADRFEFFIGGRELANGFSELNDPLDQLERF 429

Query: 509 SNVGISKEVVENRFGGLYR----AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 KE  +     +      A   GMPP  G   GIDR+VMLL   K++++V LFP 
Sbjct: 430 RAQVAEKEKGDEEAQYMDEDYVWALGHGMPPTAGEGIGIDRLVMLLTNNKSIKDVLLFPA 489

Query: 565 SQ 566
            +
Sbjct: 490 MK 491


>gi|75075861|sp|Q4R4Z1|SYNC_MACFA RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|67970984|dbj|BAE01834.1| unnamed protein product [Macaca fascicularis]
          Length = 558

 Score =  177 bits (448), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 68/339 (20%), Positives = 123/339 (36%), Gaps = 22/339 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V   +         + +E  + + G+
Sbjct: 135 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGM 194

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 195 LNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 250

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ I    R       + E + P L  +  EG       +   + +F  L Q
Sbjct: 251 NMSKILKARSMITRCFRDHFFDRGYHEITPPSLVQTQVEGGATLFKLNYFGEEAF--LTQ 308

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E   +  DD+LN +E++
Sbjct: 309 SSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPLLTFDDLLNRLEDL 367

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                N       F R+ Y DAI           +    +   
Sbjct: 368 VCDVVDRILKSPAGSIVYELNPNFQPPKRPFKRMNYSDAIIWLKEHDIKKEDG-TFYEFG 426

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           E    +  R+ +  ++       + +  K     R   D
Sbjct: 427 EDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPED 465



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   +E +L  +   GI        +       + G  PHGG   G+
Sbjct: 475 LMPNVGEIVGGSMRTSDAEEILAGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 530

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R +  +L   ++R+V L+P     C  
Sbjct: 531 ERFLTWILNRYHIRDVCLYPRFVQRCTP 558


>gi|326427198|gb|EGD72768.1| aspartyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 535

 Score =  177 bits (448), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 83/376 (22%), Positives = 143/376 (38%), Gaps = 42/376 (11%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKS 64
             DL V D  S V + G VH VR  G   FL IR      Q +   +    +        
Sbjct: 87  IEDLSVDDATSRVLVRGRVHTVRVTGKQAFLRIRQRTHSLQAIFAVNDVVSKAMVRFIGK 146

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-------FGE 117
           +  E ++ ++G++    +   + ++    +EL+  K+ ++  A                +
Sbjct: 147 LNPESIIDVEGILNKAPSPVESCSMK--DLELAGDKLFVVCEALPRLPLQIEDATRAEDD 204

Query: 118 REYP-ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +YP +  R   R LDLR +        ++ +    R  ++ E F E  +P +  ++ E 
Sbjct: 205 TQYPNQDTRLDNRVLDLRAEPNQAIFKMQSGVCRLFRDFLLKEGFTEIHSPKIIGTASES 264

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                        +F A  Q+PQ YKQ+ +A+   + F+I P FR ED  + R   EF  
Sbjct: 265 GSSVFKLQYFKTQAFLA--QSPQLYKQMCIAADMGKVFEIGPVFRAEDSNTHRHLTEFTG 322

Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVFE----------EFSNGNTVSNNF------LRICY 279
           LDMEM+F E   ++L  ++ +   +F           E  N       F      LRI +
Sbjct: 323 LDMEMAFNEHYHEVLEVLDRLFISIFRGLSEQFAEEVEMVNKQFPREKFTWLEPTLRIEW 382

Query: 280 DDAIRRYGT------DKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVWAIP 330
            +AI           D  D+  P    +  + +    ++F +  K  L + P Y +    
Sbjct: 383 PEAISMLREAGEEIGDFDDISTPQEKLLGRLVKAKYGTDFYILDKFPLCIRPFYTMPDPA 442

Query: 331 AKGGGGNRAFCDRMNE 346
                 +     R  E
Sbjct: 443 NPAYSNSYDIMMRGEE 458



 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF                   +  YD++  G EI SG  R H  +++ +    
Sbjct: 427 KFPLCIRPFYTMPD--------PANPAYSNSYDIMMRGEEIMSGAQRVHDPKLLEERALA 478

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+S E +    G    AF+ G  PHGG   G++R+VML LG  N+R+ SLFP       
Sbjct: 479 HGLSLEEI----GPYVDAFRYGCSPHGGGGVGLERVVMLFLGLPNIRKTSLFPRDPKRFS 534

Query: 571 L 571
            
Sbjct: 535 P 535


>gi|325107799|ref|YP_004268867.1| asparaginyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324968067|gb|ADY58845.1| Asparaginyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 461

 Score =  177 bits (448), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 63/368 (17%), Positives = 119/368 (32%), Gaps = 52/368 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           L     G  + +SGWV   R    G  F+++ D   +  +    D      A ++     
Sbjct: 8   LTDGQPGETLTISGWVRTRRDSKNGFSFVELNDGSCMGNLQIVVDGEVPGYADNIGK--- 64

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               G  +  + E   +     ++EL A +  +L +A+    P+  +    E +R +   
Sbjct: 65  -VTTGASVRFTGELKESPGKGQRVELVASEFSVLGLADPQSFPLQKKGHSFEFLR-EIAH 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-- 188
           L  R +T       R     ++        F+   TPI+T S  EGA      + ++   
Sbjct: 123 LRPRTNTFGAIARVRNAASAAVHNFFQDRGFLYVHTPIITTSDCEGAGQMFHVTTLDLAR 182

Query: 189 -----------GSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+A P +     Q +  + A+     +   P FR E+  + R   EF
Sbjct: 183 LASLQTEIDYAQDFFAKPASLTVSGQLEAEIFATSLGPCYTFGPTFRAENSNTTRHLAEF 242

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNN 273
           + ++ EM F +    +   E  ++ V                            +    +
Sbjct: 243 WMIEPEMPFFDLQANMQLAEEFIKSVINHVLTSCGDDIDFFNKRIDKTVLETLEHIRDES 302

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHN---------VTEHFVHSEFRVFSKILSVNPGY 324
           F ++ Y +AI            P+   +         +TE        +F    ++ P Y
Sbjct: 303 FAQVPYTEAIEILEKSGKTFEFPVAWGSDLQSEHERYLTEEHFKKPIVLFDYPRTIKPFY 362

Query: 325 EVWAIPAK 332
                  K
Sbjct: 363 MRCNDDGK 370



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 12/117 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                  PF M           D  +++A    LV    EI  G  R    +V+      
Sbjct: 353 DYPRTIKPFYMRCND-------DGKTVRAMDV-LVPRIGEIIGGSQREERLDVLEARMQE 404

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             ++       +       + G   H G   G +R++ LL G +N+R+   FP +  
Sbjct: 405 CDLNP----EDYWWYLDLRRFGTVEHAGFGLGFERLIQLLTGMQNIRDCIPFPRTPK 457


>gi|229529622|ref|ZP_04419012.1| asparaginyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229333396|gb|EEN98882.1| asparaginyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|327483982|gb|AEA78389.1| Asparaginyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 466

 Score =  176 bits (447), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 124/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 16  VDSEVTVRGWIRTRRDSKAGISFLAIYDGSCFNPIQAVVPNN----LNNYDNEVLKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPASGQAFELAASDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++  +     
Sbjct: 132 NVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 191

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                Y Q                    A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 AGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + + +    E++L+ VF+                            V ++F ++
Sbjct: 252 PEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARLEQFVDSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI            P+   +   +EH        F   + V    +          
Sbjct: 312 DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHFKAPVIVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRMNEDGKTVAAMDVLAPGIGEII 391



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 14/113 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M           D  ++ A   D++  G  EI  G  R    +++       GI   
Sbjct: 365 AFYMRMNE-------DGKTVAAM--DVLAPGIGEIIGGSQREERLDILDARMREFGIDP- 414

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                        + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 415 ---EHMDWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|289669570|ref|ZP_06490645.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 464

 Score =  176 bits (447), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 119/385 (30%), Gaps = 54/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D       QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEVKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +++    +  +        E+ A  +EI+   E+        +        +   L  R 
Sbjct: 77  VLVKSQGKGQS-------FEIQASGVEIVGWVEDPLTYPIQPKPMSPEFLREVAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +        R  +  ++        F   STPI+T S  EGA      S ++        
Sbjct: 130 NLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMFRVSTLDMVNLPRDG 189

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q           + +   P FR E+  + R   EF+ ++
Sbjct: 190 SGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHLAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNFLRI 277
            E++F +  +     E  L+ +F    +                        ++  F +I
Sbjct: 250 PEIAFADLAEDARLAEQFLKYLFRAVLDERGDDLAFLAERVDKNAIAKLEAFINAPFEQI 309

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA++           P+   +   TEH         ++     P             
Sbjct: 310 DYTDAVKLLQNSGKKFDFPVEWGLDLQTEHERW-----LTEEHIGRPVVVTNYPEHIKAF 364

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 365 YMRLNDDGKTVAAMDVLAPGIGEII 389



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 12/152 (7%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKA 479
           ++  +  +F + +++      E E+ +   H                  ++ ND     A
Sbjct: 317 LLQNSGKKFDFPVEWGLDLQTEHERWLTEEHIGRPVVVTNYPEHIKAFYMRLNDDGKTVA 376

Query: 480 FQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              D++  G  EI  G  R    +V+    +  G+ K      +       + G  PH G
Sbjct: 377 -AMDVLAPGIGEIIGGSQREERLDVLDARMAQFGLDK----EHYSWYRDFRRYGSVPHAG 431

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              G +R+V+ + G  N+R+   +P +    +
Sbjct: 432 FGLGFERLVVYVCGLSNIRDAIPYPRAPGSAE 463


>gi|149910166|ref|ZP_01898812.1| lysyl-tRNA synthetase [Moritella sp. PE36]
 gi|149806752|gb|EDM66716.1| lysyl-tRNA synthetase [Moritella sp. PE36]
          Length = 502

 Score =  176 bits (447), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 68/312 (21%), Positives = 131/312 (41%), Gaps = 41/312 (13%)

Query: 7   HSCGDLGVSDVGSF-----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           H   DL  ++ G             V ++G +   R      FL I+D  G  Q  A+ D
Sbjct: 39  HKSADLQ-AEFGEKSKEELVEMQHLVSIAGRIMAKRGP----FLAIQDTAGRIQAYASKD 93

Query: 56  SACFEIAKS--VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
               + A    +    ++ I G +              G + +      +L+ A   PLP
Sbjct: 94  VQKAQKADLGGLDIGDIVGITGALNKSGK---------GDLYVEMTDYVLLTKALR-PLP 143

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA- 171
                   + +R++ R++DL  +   +N  + R++++ ++R  M++++++E  TP++   
Sbjct: 144 EKFHGLTDQEMRYRQRYVDLIVNEESRNAFIVRSKLVTAIRNFMVSKDYMEVETPMMHVI 203

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                AR F+        + Y L  AP+ Y + L+  GFDR F+I   FR+E   S R  
Sbjct: 204 PGGATARPFITHHNALDQAMY-LRVAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHN 261

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDA 282
            EF  ++   ++ + +D+++  E +L  V  E      +            + RI   DA
Sbjct: 262 PEFTMMEFYQAYADYNDLMDFTEEMLSTVAVEVLGATAMPYGDHMVEFGGKYTRISMLDA 321

Query: 283 IRRYGTDKPDLR 294
           I++Y  +   ++
Sbjct: 322 IKQYNPEHEVIQ 333



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E ++         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 376 EPQLIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 435

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K+  ++           A + G+PP  G   GIDR+ ML      +R+V LFP 
Sbjct: 436 KAQVNAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFPA 495

Query: 565 SQ 566
            +
Sbjct: 496 MR 497


>gi|284173397|ref|ZP_06387366.1| lysyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|261601707|gb|ACX91310.1| lysyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 492

 Score =  176 bits (447), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 78/356 (21%), Positives = 146/356 (41%), Gaps = 31/356 (8%)

Query: 2   HRYR-THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           H+Y  TH   D+ +                +  +G V  +R HG   F+DI D     Q+
Sbjct: 24  HKYEVTHLIKDIKLIAKSQGNKSHEPFMFNISTAGRVANIRRHGKASFVDIFDEGEKLQL 83

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    E+ +     ++    G ++    +      + G++ L  +  ++LS A   
Sbjct: 84  YMRVD----ELKEKYDKFFIYVGRGDIIGVKGDLFYT--MKGELSLLVKDYQLLSKAL-- 135

Query: 111 PLPVFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
             P    +  PE  R+ +R++D L  D   K +  R  II  +R  + ++ FIE  TPI+
Sbjct: 136 IEPPDWSKLSPE-FRYAHRYVDFLYNDNARKAMEIRYTIIREIREFLYSKGFIEVETPIV 194

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   A+ F          +Y L  A + Y +  +  GF++ F+I   FR+ED    
Sbjct: 195 QPVYGGALAKPFKTHVNYLNEDWY-LRIALELYLKRYIIGGFNKVFEIGKVFRNEDIDVT 253

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  L++  ++ + +DI+N  E++L+ V ++ +N   +      I ++   +R   
Sbjct: 254 HNP-EFTLLELYWAYADYNDIMNLTEDLLKSVVKKVTNSTKIVYGKYEIDFEGPFKR--I 310

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
              D  + I+  +V E    +E +   K  ++ P    +      G       D++
Sbjct: 311 SMYDSLSEILGKDV-ESMSDNELKELMKKYNLTPRGNQYVR----GLMIEKLFDKL 361



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 55/155 (35%), Gaps = 27/155 (17%)

Query: 416 ARNHIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            R  + ++L   ++        +I D+P      E   +   H                 
Sbjct: 349 VRGLMIEKLFDKLVTPTLTNPTFITDYPI-----ETTPLCKPHR---------------- 387

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  ++++   G E+A+     +   +  + F           E          RA 
Sbjct: 388 NKPGLVERFEMFIAGMEVANAYTELNDPILQDKLFREEQEMFRRGDEEAHPYDKDFVRAL 447

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             GMPP GG+  GIDRIVML+    +++EV  FPM
Sbjct: 448 SYGMPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482


>gi|115687312|ref|XP_793463.2| PREDICTED: similar to Lysyl-tRNA synthetase, partial
           [Strongylocentrotus purpuratus]
 gi|115930119|ref|XP_001180301.1| PREDICTED: similar to Lysyl-tRNA synthetase, partial
           [Strongylocentrotus purpuratus]
          Length = 584

 Score =  176 bits (447), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 60/270 (22%), Positives = 115/270 (42%), Gaps = 19/270 (7%)

Query: 12  LGVSDVGSFV-RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFE-----IAKS 64
           L   D+   V  LSG VH  R  G  +IF D+R      QV++N      E     + + 
Sbjct: 103 LKAEDIADEVLSLSGRVHAKRASGAKLIFYDLRGEGVKLQVMSNARYFASEDEFTRLNEK 162

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R   ++ + G    R           G++ +   +I +LS      LP        +  
Sbjct: 163 IRRGDIIGVKG----RPG-----RTKKGELSILPSEITLLSPCL-HMLPHLHYGVTNKET 212

Query: 125 RFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           RF+ R+LDL  +  +    + R++I++ +R       F+E  TP++   +        + 
Sbjct: 213 RFRQRYLDLIMNDYVRDKFITRSKIVSYLRRFFDELGFLEVETPMMNMIAGGATAKPFIT 272

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              +      +  AP+ Y ++L+  G  R ++I   FR+E       P EF  L+  M++
Sbjct: 273 HHNDLNMDLFMRVAPELYLKMLVVGGLQRVYEIGRQFRNEGIDLTHNP-EFTTLEFYMAY 331

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
            + +D+++  E +L G+ +  +    V+ +
Sbjct: 332 ADYNDLMDIAERLLSGMVKFVTGSTKVTYH 361



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 6/114 (5%)

Query: 459 FTMPQGGMESLKGNDLLSI--KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F M    + S       SI     +++L     EI +     +   V  + F+       
Sbjct: 448 FIMDHPEIMSPLSKWHRSIPGLTERFELFVARKEICNAYTELNDPMVQRERFATQAKDHA 507

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             ++           A + G+PP GG   GIDR+ M L  + N++EV  FP  +
Sbjct: 508 AGDDEAQLIDENFCTALEYGLPPTGGFGLGIDRLAMFLTDSNNIKEVLFFPAMK 561


>gi|42523785|ref|NP_969165.1| lysyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|39575992|emb|CAE80158.1| lysyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
          Length = 504

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 58/304 (19%), Positives = 118/304 (38%), Gaps = 14/304 (4%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R++G +  +R  G   F +++D  G  QV    +    E+++  R  + L   G ++   
Sbjct: 72  RIAGRLMTLRMMGKASFFNLQDQTGSVQVYVKTE----ELSEQDRMAFELVDLGDIVGI- 126

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E        G+  + A+  +IL+   E PLP          I++++R LDL  D   + 
Sbjct: 127 -EGFVFKSQKGEFSIYAKSFQILTKTIE-PLPEKFHGVQDIEIKYRHRHLDLMTDADSRK 184

Query: 142 IV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           +   R++II  +R  +    F+E  TP L       A                +  +P+ 
Sbjct: 185 VFETRSKIIKEVRRFLDDRGFMEVETPTLQPVYGGAAATPFTTHHKALDMKLYMRISPEL 244

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  GF++ ++I+  FR+E       P EF  L+   ++ + +  +   E ++  +
Sbjct: 245 YLKRLIVGGFEKVYEISKNFRNEGIDRTHNP-EFALLEFYEAYTDYNYQMKQFEELISSL 303

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
             + +    V+     I +    RR           +  +   +    ++  +F  I   
Sbjct: 304 ALKITGSMKVTYQGKEIDFTPPWRRLTVH-----EGVKEYAGIDPDKATDQEIFQAIRKN 358

Query: 321 NPGY 324
               
Sbjct: 359 GGDI 362



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 10/131 (7%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            +E   E+  +       +P  +        + +        +++      EI +     
Sbjct: 375 LFELTAEQHLVQPTFVMDHPVEISPLTKIHRRDS----RLVERFEPFAACMEIGNAYSEL 430

Query: 499 HMSEVML---QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           +  E  L   +         E           A   GMPP GG+  GI+RIVMLL    +
Sbjct: 431 NDPEDQLARLKEQEANRAKDEEAHPMDEDFLLAIDAGMPPTGGVGIGIERIVMLLTDRPS 490

Query: 556 VREVSLFPMSQ 566
           +R++  FP  +
Sbjct: 491 IRDIIFFPTMR 501


>gi|169350983|ref|ZP_02867921.1| hypothetical protein CLOSPI_01760 [Clostridium spiroforme DSM 1552]
 gi|169292045|gb|EDS74178.1| hypothetical protein CLOSPI_01760 [Clostridium spiroforme DSM 1552]
          Length = 461

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 57/359 (15%), Positives = 124/359 (34%), Gaps = 39/359 (10%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
            +V L GWV   R  G + F+ + D      +         +    +         G  +
Sbjct: 26  EYVELEGWVRTNRNSGKLGFIALNDGTYFKNLQIVYTEQGIDNYAEIDKLS----TGSAI 81

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               +           E+ A +IEI    +E       ++ +      +   L  R +T 
Sbjct: 82  RVVGKLKLTPEGKQPFEVEATEIEIEGRCDEDFPLQ--KKRHSFEYMREIPHLRPRANTF 139

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----QGSFY-- 192
           +     R+ +  ++     ++ F+   TPI+T++  EGA +    + ++    +  F+  
Sbjct: 140 YAIFRLRSVLSMAIHEFFQSQGFVYVHTPIITSNDGEGAGEMFRATTIDGTNFEDDFFEK 199

Query: 193 -ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
            A      Q      A  F   +   P FR E+  + R   EF+ ++ E++F + +D ++
Sbjct: 200 EAFLTVTGQLHVEAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMIEPEIAFADLEDDMD 259

Query: 252 TMENVLRGVFEEFSNGNTVSNN---------------------FLRICYDDAIRRYGTDK 290
            +E++++   +   +      N                     F R+ Y +AI       
Sbjct: 260 LIEDMVKYCIDYVLDNAPEEMNFFASMIDKDCINRITKVRNSDFKRMTYTEAIEILEKAD 319

Query: 291 PDLRNPI-IMHNV-TEHFVHSEFRVFSKIL---SVNPGYEVWAIPAKGGGGNRAFCDRM 344
              +N +    ++ +EH  +   +V    +         + + +         A CD +
Sbjct: 320 VKFKNKVSWGMDLNSEHERYICEQVVKGPVFLTDYPKEIKAFYMRLNDDNKTVAACDLL 378



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   DL+  G  E+  G  R    +V+ +      ++K    +         +
Sbjct: 366 NDDNKTVA-ACDLLVPGIGELVGGSQREERYDVLEKIMDEKNMTK----DNLQWYMDLRR 420

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   H G   G DR +M L G +N+R+V  FP +  
Sbjct: 421 YGGCKHAGFGLGFDRFLMYLTGMQNIRDVEPFPRTPR 457


>gi|167470510|ref|ZP_02335214.1| lysyl-tRNA synthetase [Yersinia pestis FV-1]
          Length = 276

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 101/230 (43%), Gaps = 11/230 (4%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           + +    +L   ++   V ++G +   R  G   F+ ++D  G  Q+  + D     +  
Sbjct: 53  FDSKENEELEALNID--VTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYN 110

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
               +W L   G ++    +       TG++ +   ++ +L+ A   PLP        + 
Sbjct: 111 EEFKKWDL---GDILGARGKLF--KTKTGELSIHCSELRLLTKALR-PLPDKFHGLADQE 164

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R++ R+LDL  +   ++  K R+++++ +R  M+ + F+E  TP++        AR F+
Sbjct: 165 TRYRQRYLDLIANDESRHTFKVRSQVMSGIRSFMVEKGFMEVETPMMQVIPGGASARPFV 224

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                     Y L  AP+ Y + L+  GF+R F+I   FR+E       P
Sbjct: 225 THHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGVSPRHNP 273


>gi|15231261|ref|NP_187958.1| OVA5 (OVULE ABORTION 5); ATP binding / aminoacyl-tRNA ligase/
           lysine-tRNA ligase/ nucleic acid binding / nucleotide
           binding [Arabidopsis thaliana]
 gi|9280301|dbj|BAB01756.1| lysyl-tRNA synthetase [Arabidopsis thaliana]
 gi|26983796|gb|AAN86150.1| putative lysyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332641843|gb|AEE75364.1| Lysyl-tRNA synthetase, class II [Arabidopsis thaliana]
          Length = 602

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 57/319 (17%), Positives = 130/319 (40%), Gaps = 11/319 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y+  + G+   +++   V ++G V   R  G + FL +RD  G  Q+    +    +  +
Sbjct: 120 YKHLANGEESDNEID-CVSIAGRVVARRAFGKLAFLTLRDDSGTIQLYCEKERLSDDQFE 178

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++    +   G ++  S          G++ +      IL+ +  LPLP          
Sbjct: 179 QLKQFIDI---GDILGASGSMKRTE--KGELSICVNSFSILTKSL-LPLPDKYHGLTDID 232

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            R++ R++D+     +     +R +I++ +R  + +  ++E  TP+L  ++        V
Sbjct: 233 KRYRQRYVDMIANPEVADVFRRRAKIVSEIRKTVESFGYLEVETPVLQGAAGGAEARPFV 292

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
               + G    L  A + + + ++  GF++ ++I   FR+E   +   P EF  ++M  +
Sbjct: 293 TFHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNP-EFTTIEMYEA 351

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           + +   +++  E ++       +   T+      IC +   RR      +L   I   N 
Sbjct: 352 YSDYHSMMDMAELIVTQCSMAVNGKLTIDYQGTEICLERPWRR--ETMHNLVKEITGINF 409

Query: 303 TEHFVHSEFRVFSKILSVN 321
           +E          + +L++ 
Sbjct: 410 SELGEDLGNAKDTVLLALQ 428



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 72/226 (31%), Gaps = 56/226 (24%)

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK--------FCSFAADARNHIA 421
             M  + K +  +N   +   L     D+      D L+         CS      N I 
Sbjct: 395 ETMHNLVKEITGINFSELGEDLG-NAKDTVLLALQDVLEPKDKSGIRACSSLGHLLNEIF 453

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +   ++     +  +++D+P      E   +   H                   +    +
Sbjct: 454 EV--VVEPKLVQPTFVLDYPI-----EISPLAKPHR----------------GNAGLTER 490

Query: 482 YDLVCNGFEIASGGIRNHMS-------EVMLQAFSNVG------------ISKEVVENRF 522
           ++L   G E+A+               E  ++  +                  +  +  +
Sbjct: 491 FELFICGREMANAFSELTDPVDQRTRLEEQVRQHNAKRAEAVRESPEPNAKKDDDDDESY 550

Query: 523 G-----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                     A + GMPP  G+  GIDR+VMLL  + ++R+V  FP
Sbjct: 551 EVTLDEDFLTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFP 596


>gi|171913093|ref|ZP_02928563.1| asparaginyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 454

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 73/355 (20%), Positives = 134/355 (37%), Gaps = 51/355 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEW 69
           L   +    V + GWV   R      F+++ D   +   QVVA+   AC  +   V +  
Sbjct: 10  LASKEPVQDVTVQGWVRTRRDSKACTFIELNDGSCLRGLQVVADNSLACAGLYPRVLTGA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G +++               E+ A+ +EI+  ++   +    +   PE +R    
Sbjct: 70  SVRVTGDLVASPGG-------KQAFEILAKNVEIIGESDGTYVLQK-KGHTPEFLR-SIS 120

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L  R + L      R+R+  ++      ++F    TPI+T+S  EGA +    + + QG
Sbjct: 121 HLRPRTNLLGSVFRVRSRMAFAIHKFFQEQDFFYVHTPIITSSDCEGAGEMFRVTTLPQG 180

Query: 190 -------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+  P       Q +  + A    + +   P FR E+  + R   EF+ ++ 
Sbjct: 181 GAAKPEEDFFGKPTFLTVSGQLQGEVFACALSKIYTFGPTFRAENSNTARHAAEFWMIEP 240

Query: 240 EMSFVEQDDILNT----MENVLRGVFE------EFSN-----------GNTVSNNFLRIC 278
           EM+F +    +      ++ +L+ +FE      EF N            +T+   F R+ 
Sbjct: 241 EMAFYDLQADMGLAEANVKYLLKSLFETCGEELEFFNKFVDTGLIARLQHTLDKPFQRVS 300

Query: 279 YDDAIRRYGTDKPDLRNPIIMHN---------VTEHFVHSEFRVFSKILSVNPGY 324
           Y DA+            P+             + E    S   VF+   S+ P Y
Sbjct: 301 YTDAVDLLLKSGRKFEYPVEWGQNLQSEHERFLAEEHFQSPVTVFNYPRSLKPFY 355



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 12/109 (11%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           PF M Q        ND     A    LV    EI  G  R    +++ QA +  G+S   
Sbjct: 353 PFYMRQ--------NDDGRTVAAMDVLVPGIGEIIGGSQREERLDLLEQAMAAHGLS--- 401

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            E  +       + G  PH G   G +R +M   G  N+R+V  F  + 
Sbjct: 402 -EENYRWYADLRRFGTVPHAGYGMGFERFLMFATGVSNIRDVIPFARTP 449


>gi|313680121|ref|YP_004057860.1| aspartate--tRNA(asn) ligase [Oceanithermus profundus DSM 14977]
 gi|313152836|gb|ADR36687.1| aspartate--tRNA(Asn) ligase [Oceanithermus profundus DSM 14977]
          Length = 424

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 66/250 (26%), Positives = 117/250 (46%), Gaps = 19/250 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  V L GW+H  R  GGI F+ +RD  GI QVV           K    E  + + G+
Sbjct: 13  VGEEVELQGWLHWRRNLGGIQFILLRDRSGIVQVVLPGG------LKLPLPESAVRVRGV 66

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YPESIRFKYRFLDLR 134
           V+             G  E+ A+ +E+L  +++       + E          YR++ LR
Sbjct: 67  VVQNDK-------APGGYEVQAEDLEVLQPSQQPTPVEIPKEEWRANPETLLTYRYVTLR 119

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +     +  ++ ++   R  + ++ F E  TP L  +  EG  +        + ++ A 
Sbjct: 120 GEKARAPLKIQSALVRGFRKYLDSQGFTEIFTPKLVRAGAEGGANLFEVDYFGESAYLA- 178

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTM 253
            Q+PQ YKQ +M   ++R +++AP +R E+  + R   E+  LD+EM F++  +D++   
Sbjct: 179 -QSPQLYKQ-IMVGVYERVYEVAPVWRAEEHATSRHLNEYLSLDVEMGFIDSDEDVMALE 236

Query: 254 ENVLRGVFEE 263
           E ++R + EE
Sbjct: 237 EELVRAMLEE 246



 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/160 (27%), Positives = 63/160 (39%), Gaps = 28/160 (17%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           AD  +   + LG      +  +F +I+ +P             +  PF     G      
Sbjct: 291 ADLNDEAERALGAYFAEKYGTDFVFIVQYP------------ESVRPFYTYPTGD----- 333

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
                     YDL+  G EI SGG R H  +V++Q     G+       RF      F+ 
Sbjct: 334 -----GLTRGYDLLFRGLEITSGGQRIHDPDVIVQQLEKKGMDP----QRFRDYIEVFKY 384

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GMPPHGG A G +R    L+G  NVR    FP  ++  + 
Sbjct: 385 GMPPHGGFAIGAERFTQKLIGLPNVRYARAFPRDRHRLEP 424


>gi|15897053|ref|NP_341658.1| lysyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|2501022|sp|P95970|SYK_SULSO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1707804|emb|CAA69561.1| lysyl tRNA synthetase [Sulfolobus solfataricus P2]
 gi|13813220|gb|AAK40448.1| Lysyl-tRNA synthetase (lysS) [Sulfolobus solfataricus P2]
          Length = 494

 Score =  176 bits (447), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 78/356 (21%), Positives = 146/356 (41%), Gaps = 31/356 (8%)

Query: 2   HRYR-THSCGDLGVSDVGS----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           H+Y  TH   D+ +                +  +G V  +R HG   F+DI D     Q+
Sbjct: 26  HKYEVTHLIKDIKLIAKSQGNKSHEPFMFNISTAGRVANIRRHGKASFVDIFDEGEKLQL 85

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    E+ +     ++    G ++    +      + G++ L  +  ++LS A   
Sbjct: 86  YMRVD----ELKEKYDKFFIYVGRGDIIGVKGDLFYT--MKGELSLLVKDYQLLSKAL-- 137

Query: 111 PLPVFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
             P    +  PE  R+ +R++D L  D   K +  R  II  +R  + ++ FIE  TPI+
Sbjct: 138 IEPPDWSKLSPE-FRYAHRYVDFLYNDNARKAMEIRYTIIREIREFLYSKGFIEVETPIV 196

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   A+ F          +Y L  A + Y +  +  GF++ F+I   FR+ED    
Sbjct: 197 QPVYGGALAKPFKTHVNYLNEDWY-LRIALELYLKRYIIGGFNKVFEIGKVFRNEDIDVT 255

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  L++  ++ + +DI+N  E++L+ V ++ +N   +      I ++   +R   
Sbjct: 256 HNP-EFTLLELYWAYADYNDIMNLTEDLLKSVVKKVTNSTKIVYGKYEIDFEGPFKR--I 312

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
              D  + I+  +V E    +E +   K  ++ P    +      G       D++
Sbjct: 313 SMYDSLSEILGKDV-ESMSDNELKELMKKYNLTPRGNQYVR----GLMIEKLFDKL 363



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 55/155 (35%), Gaps = 27/155 (17%)

Query: 416 ARNHIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            R  + ++L   ++        +I D+P      E   +   H                 
Sbjct: 351 VRGLMIEKLFDKLVTPTLTNPTFITDYPI-----ETTPLCKPHR---------------- 389

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  ++++   G E+A+     +   +  + F           E          RA 
Sbjct: 390 NKPGLVERFEMFIAGMEVANAYTELNDPILQDKLFREEQEMFRRGDEEAHPYDKDFVRAL 449

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             GMPP GG+  GIDRIVML+    +++EV  FPM
Sbjct: 450 SYGMPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 484


>gi|226948294|ref|YP_002803385.1| aspartate--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226840940|gb|ACO83606.1| aspartate--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 429

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 15/255 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +   V L GW+H++R    I FL IRD  G+ Q + + D         V+ E ++ + G+
Sbjct: 13  INENVNLQGWIHKIRKLKNITFLIIRDRSGLIQCIVDNDKL---DLSEVKIESIVSMTGV 69

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYPESIRFKYRFLDLR 134
           V   +             E+  + +EI++ A +       +   E         R L LR
Sbjct: 70  VKESTNALNP-------FEIQVENLEIINAALDKVPIEINKENLEINLDTMLNNRILSLR 122

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
              ++     +  I+N  R  +  E F E  TP +     EG  +          ++ A 
Sbjct: 123 HPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFENTAYLA- 181

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTM 253
            Q+PQ YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+E+ F+ ++ DI+   
Sbjct: 182 -QSPQFYKQMMVVAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIKDEKDIMEVE 240

Query: 254 ENVLRGVFEEFSNGN 268
           E +L+ + E+ +   
Sbjct: 241 ERLLKFILEKLNKEC 255



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 81/213 (38%), Gaps = 16/213 (7%)

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  DE   +     + K +     +  +   D+ D +     +  P      A D   
Sbjct: 227 IGFIKDEKDIMEVEERLLKFILEKLNKECKEYFDLLDSELPKIESEIPKITFKEALDILI 286

Query: 419 HIAQELGI---INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
               +  +   ++    +          ++ +E+   DF     T        +    L 
Sbjct: 287 KEYNKNNLTCDLDPEGEKLI-------CKYAKEKLDSDFIFL--TNYPREKRPMYTMPLG 337

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
                 +DL+  G EI +GG R H   +++      G++ +  E+       AF+ GMP 
Sbjct: 338 KDGTHSFDLLFRGIEITTGGQRIHDYNMLVDNMEFKGLNPKDYES----YLSAFKYGMPK 393

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           HGG+A G++R+   LLG +NVRE +L    +  
Sbjct: 394 HGGLAIGLERLTSRLLGLENVREAALITRDRTR 426


>gi|126460722|ref|YP_001057000.1| aspartyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126250443|gb|ABO09534.1| aspartyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 428

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 69/259 (26%), Positives = 123/259 (47%), Gaps = 14/259 (5%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK--- 63
           H   D+     G+ V ++GWV  +R  G + FL +RD  G  QV          + K   
Sbjct: 6   HWTSDVTPEKHGAEVVVAGWVWELRDLGRVKFLVVRDREGFVQVTLKAGKTPEHLLKMFG 65

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +  E V+ + G+V +       + I    +E+   +I +L+ A+ LPL ++ E     +
Sbjct: 66  ELNREDVVLVRGVVEA-------SKIAKSGVEIFPSEITVLNKAKPLPLDIWSESP-DLA 117

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R ++R +DL+R          + ++ ++R  +  E F+E  TP +  +S EG  +    
Sbjct: 118 TRLRWRSVDLKRPRNLAIFSFASDVLKAIRGVLYEEKFVEVFTPKIIVTSTEGGAELFPV 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++  L Q+PQ YK+ L AS  +R F+I P +R E   +D    EF  +D E +F
Sbjct: 178 LYFERVAY--LSQSPQLYKEQLTAS-LERVFEIGPAYRAEKHNTDFHLNEFISVDAEAAF 234

Query: 244 VEQDDILNTMENVLRGVFE 262
           +   DI+  +E ++  + E
Sbjct: 235 MNYWDIMGLLEKIVHRLAE 253



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 26/137 (18%)

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            +I+DFP             A  PF   +   E           +  YDL+ NG EIASG
Sbjct: 318 YFIVDFP------------AALRPFYTKRKEGE----------LSESYDLIINGLEIASG 355

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
             R H  + + +     G+   +    F      F  GMPPH G   G +R+V  LL   
Sbjct: 356 ATRIHRRDELEEEMRRRGLDPRL----FESHLSVFDYGMPPHAGFGLGFNRLVTALLNLD 411

Query: 555 NVREVSLFPMSQNFCDL 571
           NVR  +L+P  +   + 
Sbjct: 412 NVRHATLYPRDRYRVEP 428


>gi|284034397|ref|YP_003384328.1| lysyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283813690|gb|ADB35529.1| lysyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 1117

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 58/293 (19%), Positives = 114/293 (38%), Gaps = 19/293 (6%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
             G  V ++G V R+R HG + F  ++D     QV+    +     A+ +R+       G
Sbjct: 675 HTGHHVSVTGRVMRLRDHGNLAFAQLQDGLDQLQVMLAAGTCP---AEDLRNWDRFVDIG 731

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +S + E + +    G++ ++     + +     PLP   +       R + R LDL  
Sbjct: 732 DHVSVTGEVVTSR--RGELSVAVTGWTMAAKCL-HPLPDKRKGFTDPEARVRQRHLDLVT 788

Query: 136 DTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           +    + +  R+  + ++R    A  F+E  TP+L A      AR F+          + 
Sbjct: 789 NPDALRMLRHRSTAVRALRHGFEARGFVEVETPMLQAVHGGANARPFVTHINAYDTDLF- 847

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ + + L   G  + F++   FR+E   +   P EF  ++    + +   +    
Sbjct: 848 LRIAPELFLKRLGVGGLGKVFELNRNFRNEGADATHNP-EFTSVEAYQPYADYHVMRELT 906

Query: 254 ENVL---------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
             +L         + V +       +S ++  +   DA+ R      D   P+
Sbjct: 907 RELLLETAVAVFGKAVVQRDGAELDISGDWPVVTVHDAVSRAAGVTIDPGTPV 959



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 54/169 (31%), Gaps = 28/169 (16%)

Query: 399  CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
                 G    F   A +    +  EL  +        +  DFP      E   +   H  
Sbjct: 965  ICAQHGVRAGFDLSAGELVLELYDEL--VEPRTTLPTFYTDFPL-----ETSPLPRGHR- 1016

Query: 459  FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS---- 514
                          D     A ++DLV  G EI +            +  +   +     
Sbjct: 1017 -------------TDPR--LAERWDLVAFGAEIGTAYSELVDPVEQRRRLTEQSLKAAAG 1061

Query: 515  KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 +       A +  +PP GG+  G+DRI+M+L G +N+R    FP
Sbjct: 1062 DPEAMSLDEDFLAALEYALPPTGGLGLGVDRILMMLTG-QNIRATLAFP 1109


>gi|317057283|ref|YP_004105750.1| asparaginyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315449552|gb|ADU23116.1| asparaginyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 457

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 66/355 (18%), Positives = 125/355 (35%), Gaps = 51/355 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV-RSEWVL 71
               +G  V + GWV   R    + F+++ D   +  +    D A     K + R    L
Sbjct: 12  NKELIGQQVTVCGWVRTSRNSKNVAFVELNDGTSLKNIQIVIDKADDPDYKDIPRVGCSL 71

Query: 72  CIDG-LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            + G LV  R+A  IN         ++   I +L        P+  +    E +R     
Sbjct: 72  KVTGALVEGRNAAEIN---------VTPADITLLGDC-PQDYPLQKKGHTLEFLR-TMPH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR----- 185
           L  R +T +  +  R+ +  ++       NF+  +TP++T S  EGA +    +      
Sbjct: 121 LRGRTNTFNAVMRIRSVLAQAIHQYYQERNFVYVNTPLITGSDCEGAGEMFRVTTIGYST 180

Query: 186 -------VNQGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                   +   F+          Q +  + A+   + +   P FR E+  + +   EF+
Sbjct: 181 EYKTEDDYDAADFFGRRAGLSVSGQLEGEMAATAMGKIYTFGPSFRAENSNTPKHLAEFW 240

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-------------------- 275
            ++ E++F E +D++   E++++ V             F                     
Sbjct: 241 HVEPEIAFAELEDVIEVAEDMVKHVIGTVLEKCPDEIAFFDAHFEKGLKARLEELISHEF 300

Query: 276 -RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVW 327
            R+ Y +AI            P+       TEH  +   +VF K + V    +  
Sbjct: 301 GRVTYTEAIELLKKSGEKFVYPVDWGCDLQTEHERYLSEKVFKKAVFVTDYPKDI 355



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 72/219 (32%), Gaps = 25/219 (11%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF----AADARNH--IA 421
               + P      + +   +   +      +      D + F          AR    I+
Sbjct: 238 EFWHVEPEIAFAELEDVIEVAEDMVKHVIGTVLEKCPDEIAFFDAHFEKGLKARLEELIS 297

Query: 422 QELG---------IINCNCFEFCWIMDFPFYEWNEEEKKID---FAHNPFTMPQGGMES- 468
            E G         ++  +  +F + +D+      E E+ +    F    F          
Sbjct: 298 HEFGRVTYTEAIELLKKSGEKFVYPVDWGCDLQTEHERYLSEKVFKKAVFVTDYPKDIKS 357

Query: 469 -LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
                +         DL+  G  EI  G  R    + ++ A     ++     + +    
Sbjct: 358 FYMKQNPDGKTVAAVDLLVPGVGEIIGGSEREADYDKLIAAMKERNMNL----DLYSDYL 413

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
              + G  PHGG   G +R++M + G +N+R+V +FP +
Sbjct: 414 DLRKFGTVPHGGFGLGFERLIMYVTGVQNIRDVIMFPRT 452


>gi|225571192|ref|ZP_03780190.1| hypothetical protein CLOHYLEM_07280 [Clostridium hylemonae DSM
           15053]
 gi|225160023|gb|EEG72642.1| hypothetical protein CLOHYLEM_07280 [Clostridium hylemonae DSM
           15053]
          Length = 478

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 117/353 (33%), Gaps = 51/353 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   + + GWV  +R      F+ + D       QVV +     F+    +     
Sbjct: 28  REEYLDKDITVGGWVRSIRDSKAFGFIVVNDGTFFEPLQVVYHNTMDNFDEISRLNVGAA 87

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A++I +   +     P+  +R   E +R     
Sbjct: 88  IIVTGTLVATPQ-------AKQPFEIQAKEITVEGASAPDY-PLQKKRHSFEYLR-TIAH 138

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++        F+   TPI+T S  EGA +    + ++   
Sbjct: 139 LRPRTNTFQAVFRVRSLTAYALHKFFQERGFVYVHTPIITGSDCEGAGEMFRVTTLDMQS 198

Query: 190 -------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+    +     Q      A  F   +   P FR E+  + R   E
Sbjct: 199 IPKDDSGKVDYSQDFFGKETSLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAE 258

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSN 272
           F+ ++ EM+F + DD +   E +L+ V                            N VS+
Sbjct: 259 FWMIEPEMAFADLDDDMMLAEAMLKYVISYVLEQAPEEINFFNSFVDKGLLERLNNVVSS 318

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
            F R+ Y +A+     +       +       TEH  +    ++ + + V   
Sbjct: 319 EFARVTYTEAVEILEKNNDKFEYKVSWGTDLQTEHERYLTEEIYKRPVFVTDY 371



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 52/150 (34%), Gaps = 24/150 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +         ++ D+P     +E K        F M Q        ND     A  
Sbjct: 353 HERYLTEEIYKRPVFVTDYP-----KEIK-------AFYMKQ--------NDDGKTVAAV 392

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    + +L     + +     E  +       + G   H G   
Sbjct: 393 DCLVPGIGEIIGGSQREDDYDKLLARMKEMDLK----EEDYEFYLDLRKYGSTRHSGFGL 448

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R +M L G  N+R+V  FP + N C+L
Sbjct: 449 GFERCIMYLTGMGNIRDVVPFPRTVNNCEL 478


>gi|146318268|ref|YP_001197980.1| asparaginyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|166232742|sp|A4VTZ1|SYN_STRSY RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|145689074|gb|ABP89580.1| Aspartyl/asparaginyl-tRNA synthetase [Streptococcus suis 05ZYH33]
          Length = 508

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 62/305 (20%), Positives = 110/305 (36%), Gaps = 24/305 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G + FL +RD       V   P+          +  F++AK +
Sbjct: 15  VGQEVTIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKFGEEAGTEKFDVAKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  +++ P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKF-------GYELDVTDLEVIGESQDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR          R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G    L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E SF+ 
Sbjct: 185 F--GQLAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLS 241

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            ++ L+  E  ++ + +   +    +   L    D   R        +     +  + EH
Sbjct: 242 HEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRYIAEPFKRVAYDDAITLLQEH 301

Query: 306 FVHSE 310
               +
Sbjct: 302 EADKD 306



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 22/134 (16%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ K   E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDNYDALVAKMDELGMDKSEYE----FYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFP 563
           + G K++RE   FP
Sbjct: 427 VAGTKHIREAIPFP 440


>gi|255580096|ref|XP_002530880.1| lysyl-tRNA synthetase, putative [Ricinus communis]
 gi|223529533|gb|EEF31486.1| lysyl-tRNA synthetase, putative [Ricinus communis]
          Length = 607

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 60/331 (18%), Positives = 118/331 (35%), Gaps = 36/331 (10%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
            V L+G + + R     + F D+       QV+A+   +  E A+  +    +    +V 
Sbjct: 125 TVSLAGRIMKKRSAAAKLFFYDLHGGGVKVQVMADFSKSDMEEAEFSKFHSNVKRGDIV- 183

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--------------------- 117
                        G++ +      +LS    +                            
Sbjct: 184 --GVTGFPGKTKRGELSIFPSSFAVLSHCLHMMPKEKAGPGAVNANRTDVWLPGCPRNPD 241

Query: 118 --REYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                 +  R++ R+LDL  +  + +    R+RII  +R  + + +F+E  TP++   + 
Sbjct: 242 TYILKDQETRYRQRYLDLMLNLEVRQIFKTRSRIITYIRSFLDSLDFLEVETPMMNMIAG 301

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             A    V           +  AP+ Y + L+  G DR ++I   FR+E       P EF
Sbjct: 302 GAAARPFVTHHNELNMRLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNP-EF 360

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
              +  M+F + +D++   E +L G+ +E + G+       +I Y          + D  
Sbjct: 361 TTCEFYMAFADYNDLMELTERLLSGMVKELTGGH-------KIKYHANGLEKDPIEIDFT 413

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
            P    ++ E           K L+ +   +
Sbjct: 414 PPFRRIDMIEELEKMANLNIPKDLTSDEANK 444



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQ 530
                 +++L  N  E+ +     +   V  + F++    ++  ++    L      A +
Sbjct: 502 RPGLTERFELFMNKHEVCNAYTELNDPVVQRERFADQLKDRQSGDDEAMALDETFCTALE 561

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG   GIDR+ M+L  ++N++EV LFP  +
Sbjct: 562 YGLPPTGGWGMGIDRLAMILTDSQNIKEVLLFPAMK 597


>gi|242762857|ref|XP_002340463.1| lysyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218723659|gb|EED23076.1| lysyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 602

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 117/302 (38%), Gaps = 23/302 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV-----VANPDSA 57
           Y +   G+L      + V+++G +   R  G  + F D+R      Q+      A  +  
Sbjct: 112 YASLGKGELKQ---DTTVQVAGRIENKRSAGTKLFFYDLRAEGIKLQILCQAQYATGEVP 168

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E  + +R   ++ I G        +       G++ + A ++++L+            
Sbjct: 169 FAEQHEQLRRGDIIGITGF----PGRSNPKTRDEGELSIFATEVKLLAPCLHALPR---- 220

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                  RF+ R+LDL  +   + +   R +I+  +R    + +F E  TP++ A +   
Sbjct: 221 GLQDSETRFRQRYLDLIMNESSRKVFTTRAKIVRYVRNFFDSRDFTEVETPMMNAIAGGA 280

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                +    +      +  AP+ Y ++L+  G +R +++   FR+E       P EF  
Sbjct: 281 TAKPFITHHNDLNLNLFMRVAPELYLKMLIVGGLERVYELGRQFRNEGIDLTHNP-EFTT 339

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
            +   ++ +  D+++  E ++ G+ +  + G   + +         +       P  R  
Sbjct: 340 CEFYWAYADVYDVMDLTEELVSGLVKHVTGGYETTFH----TQSGEVYNVNWKAPWRRVE 395

Query: 297 II 298
           +I
Sbjct: 396 MI 397



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 4/91 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++      EI +     +        F      K   ++           + + G
Sbjct: 481 GLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQARQKSQGDDEAQLIDENFCTSLEYG 540

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +PP GG   GIDR+VM L    +++EV  FP
Sbjct: 541 LPPTGGWGMGIDRLVMFLTDNYSIKEVLTFP 571


>gi|213584164|ref|ZP_03365990.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 173

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 74/175 (42%), Positives = 114/175 (65%), Gaps = 3/175 (1%)

Query: 31  RPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGLVMSRSAETINANI 89
           R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G V +R A+ +NA++
Sbjct: 1   RDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARDAKNVNADM 60

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRII 149
            TG+IE+ A  + I++ A+   LP+       E  R KYR+LDLRR  + + +  R +I 
Sbjct: 61  ATGEIEVLASSLTIINRADS--LPLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKIT 118

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQL
Sbjct: 119 SLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQL 173


>gi|262402352|ref|ZP_06078913.1| asparaginyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262351134|gb|EEZ00267.1| asparaginyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 466

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 124/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAIYDGSCFNPIQAVVPNN----LNNYDNEVLKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  +   +++       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGTIVDSPASGQAFELAATAVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++  +     
Sbjct: 132 NVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 191

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                Y Q                    A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 AGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + + +    E++L+ VF+                            V ++F ++
Sbjct: 252 PEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARLEQFVDSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI            P+   +   +EH        F   + V    +          
Sbjct: 312 DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHFKAPVIVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRMNEDGKTVAAMDVLAPGIGEII 391



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 39/113 (34%), Gaps = 14/113 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M           D  ++ A   D++  G  EI  G  R    +V+       GI   
Sbjct: 365 AFYMRMNE-------DGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMREFGIDP- 414

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                        + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 415 ---EHMDWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|168038837|ref|XP_001771906.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676857|gb|EDQ63335.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 609

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 59/327 (18%), Positives = 119/327 (36%), Gaps = 46/327 (14%)

Query: 24  SGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           +G V   R  G  ++F D+       QV+A  + A        ++   +    +V     
Sbjct: 117 AGRVMSKRASGGKLMFYDLHADGLKIQVIAQSNYASVSEEDFAKTHASVKRGDIV---GI 173

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGER------------------------ 118
                    G++ +  + IE+LS    +    + +                         
Sbjct: 174 NGFPGKSKKGELSIFVKSIELLSYCLHMLPKTYAKGGKDHAEKMAEQWHPGASRNLDRYV 233

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
              +  R++ R+LDL  ++  +N+ K R+++I  +R  +   +F+E  TP++   +   A
Sbjct: 234 LKDQETRYRQRYLDLMLNSDIRNVFKTRSQVIRYVRRFLDDRDFVEVETPMMNMIAGGAA 293

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                    +      +  AP+ Y + L+  G DR ++I   FR+E       P EF   
Sbjct: 294 AKPFKTHHNDLNMDLFMRIAPELYLKELIVGGLDRVYEIGKQFRNEGIDLTHNP-EFTTC 352

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN----------------FLRICYDD 281
           +   ++ + DD++   E +L G+ +E + G  +  +                F RI    
Sbjct: 353 EFYWAYADYDDLMRVTEEMLSGMVKEITGGYKIQYHSNGLDQPAIEIDFTPPFRRIDMIK 412

Query: 282 AIRRYGTDKPDLRNPIIMHNVTEHFVH 308
            +  Y   K  L   + +    E   +
Sbjct: 413 GLEEYSEGKIKLPESLELLESPEVNKY 439


>gi|261210976|ref|ZP_05925266.1| asparaginyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260839951|gb|EEX66551.1| asparaginyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 466

 Score =  176 bits (447), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 123/385 (31%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAIYDGSCFNPIQAVVPNN----LNNYDNEVLKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  +   + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGTIVESPASGQAFELAATAVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++  +     
Sbjct: 132 NVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 191

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                Y Q                    A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 AGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + + +    E++L+ VF+                            V ++F ++
Sbjct: 252 PEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARLEQFVDSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI            P+   +   +EH        F   + V    +          
Sbjct: 312 DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHFKAPVIVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRMNEDGKTVAAMDVLAPGIGEII 391



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 39/113 (34%), Gaps = 14/113 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M           D  ++ A   D++  G  EI  G  R    +V+       GI   
Sbjct: 365 AFYMRMNE-------DGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMREFGIDP- 414

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                        + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 415 ---EHMDWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|183598382|ref|ZP_02959875.1| hypothetical protein PROSTU_01775 [Providencia stuartii ATCC 25827]
 gi|188020559|gb|EDU58599.1| hypothetical protein PROSTU_01775 [Providencia stuartii ATCC 25827]
          Length = 466

 Score =  176 bits (446), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 125/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VGS V + GWV   R  + G  FL + D      + A  ++        V    +    G
Sbjct: 16  VGSEVTVQGWVRTRRDSNAGFSFLAVYDGSCFNPLQAVINNNLPNYNDEV----LHLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  +     +       EL A  + ++   E+        + +      +   L  R 
Sbjct: 72  CSVEVTGIVKESPGQGQSFELEATAVNVVGWVEDPDTYPMAAKRHSVEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           + +      R  +  ++      + +   STPI+TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFDEQGYFWVSTPIITASDTEGAGEMFRVSTLDYNNLPRND 191

Query: 190 --------SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A+   + +   P FR E+  + R   EF+ ++
Sbjct: 192 KGEVDFSEDFFGRESFLTVSGQLNGEAYATALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            E++F   DD+    E +L+ VF+   +       F                      ++
Sbjct: 252 PEVAFASLDDVAGLAEQMLKFVFKAALDERRDDLEFFAQRVDKEVINRLESFVNSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI+   T      NP+    ++ +EH  +   + F   + V    +          
Sbjct: 312 DYTDAIKILETCGKKFENPVYWGVDMSSEHERYLAEQHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +++      +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDMLDARLEELGMNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+V  + G  NVREV  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLVAYVTGVGNVREVIPFPRTPR 462


>gi|303388940|ref|XP_003072703.1| lysyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303301845|gb|ADM11343.1| lysyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 440

 Score =  176 bits (446), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 96/550 (17%), Positives = 160/550 (29%), Gaps = 123/550 (22%)

Query: 28  HRVRPHGGIIFLDIR-DHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETIN 86
             +R H    F  I      I  VV        +I K ++   ++   G V         
Sbjct: 1   MSIRLHSRFCFFIISSCGESIQLVVDAKKEGSEQIIKFLKRGDIVGFIGNV--------- 51

Query: 87  ANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKR 145
               T +  + A  +++L+      +P            ++ R++DL       +   KR
Sbjct: 52  GRTRTLEPSVFATDVKVLTPCLR-TIPTEHFGLKDPETIYRRRYMDLLINRESKERFEKR 110

Query: 146 TRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           T+II  +R  + +  F+E  TP++        A+ F+        + Y +  +P+ Y + 
Sbjct: 111 TQIIRYIRSFLDSRGFLEVETPMMNLIPGGAAAKPFITHHNELNLNLY-MRVSPELYLKK 169

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           L+  G DR ++I   FR+E                          ++   N         
Sbjct: 170 LVVGGLDRVYEIGKQFRNEG-------------------------IDLTHN--------- 195

Query: 265 SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF-SKILSVNPG 323
                           +    YG D  DL     M    E        +F +  +  NP 
Sbjct: 196 ----------PEFTSCEFYMAYG-DYNDL-----MKMTEELMSGIVQEMFGTDTIVYNPR 239

Query: 324 YEVWAIPAKGGGGNRAF--CDRMNEWARSQGQPGLAYIFWRLDESGN-VAGMGPVAKHLN 380
                I        R F     + E     G          LD SG  +     + K L 
Sbjct: 240 KRGEEIKPVSLSFKRPFRVISIIEELNTRLG----------LDLSGETLDNEETLEKLLG 289

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
           +   E I V                P            H+      I   C    +I D+
Sbjct: 290 VCEKEGIHVE--------------KPRTLTRVLDKLIGHV------IEPQCVNPTFIKDY 329

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P                            K +        +++L  N  E+ +     + 
Sbjct: 330 PI---------------------AMSPLAKNHRSKPGLTERFELFINCKEVCNAYTELNN 368

Query: 501 SEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                + F          ++           A + G+PP  G   GIDR VM L  A N+
Sbjct: 369 PFEQRERFLQQAQDINAGDDEAMMNDEDFCTALEYGLPPTAGWGLGIDRFVMYLTNAANI 428

Query: 557 REVSLFPMSQ 566
           R+V  FP  +
Sbjct: 429 RDVIFFPTMK 438


>gi|90414515|ref|ZP_01222490.1| asparaginyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90324423|gb|EAS40985.1| asparaginyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 466

 Score =  176 bits (446), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 125/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +      + V    +    G
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNELNNYQEEV----LKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++ + E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPAKGQDFELAATDVKVVGLVEDPDTYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   S P++TAS  EGA +    S ++        
Sbjct: 132 NMIGAVARVRNCLSQAIHRFYHEQGFFWMSAPLITASDCEGAGEMFRVSTLDMANVPMTD 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 AGEVDYDKDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + DD     E++L+ VF+                            V ++F ++
Sbjct: 252 PEVAFADLDDAAKLAEDMLKYVFKAVLEERRDDLEFFAQRINKEAITRLEQFVDSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI+            +   +   +EH  +     F   + V    +          
Sbjct: 312 DYTDAIQILQDSGRKFEFDVEWGIDMSSEHERYLAEEHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRMNDDGKTVAAMDVLAPGIGEII 391



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 69/218 (31%), Gaps = 27/218 (12%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y+F  + E         +      +N EAI       D D       D ++    +  
Sbjct: 270 LKYVFKAVLE----ERRDDLEFFAQRINKEAITRLEQFVDSDFAQVDYTDAIQILQDSGR 325

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNE---EEKKIDFAHNPFTMPQGGMESLKGN 472
                           F+  W +D      +E    E+           P+         
Sbjct: 326 -------------KFEFDVEWGID--MSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRM 370

Query: 473 DLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         D++  G  EI  G  R    E++ +  + +GI    +E          + 
Sbjct: 371 NDDGKTVAAMDVLAPGIGEIIGGSQREERLELLDKRIAEMGIDASHIE----WYRDLRRY 426

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G  PH G   G +R+V  + G +N+R+V  FP +    
Sbjct: 427 GTVPHSGFGLGFERLVTYVTGMQNIRDVIPFPRAPRSA 464


>gi|57491377|gb|AAW51378.1| GekBS062P [Gekko japonicus]
          Length = 597

 Score =  176 bits (446), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 58/276 (21%), Positives = 115/276 (41%), Gaps = 15/276 (5%)

Query: 6   THSCGDLGVSDVGS-----FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           TH   +      G       ++++G +H  R  G  +IF D+R      QV+AN  S  +
Sbjct: 106 THFIEEYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNY 163

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  +           G ++             G++ +   +I +LS      LP      
Sbjct: 164 KSEEEFVRINNKLRRGDIIGVQGSP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGL 220

Query: 120 YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
             +  R++ R+LDL  +   +   + R++II  +R  + A  F+E  TP++        A
Sbjct: 221 KDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDALGFLEIETPMMNIIPGGAVA 280

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           +  +        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   
Sbjct: 281 KPSITYHNELDMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTC 338

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +  M++ +  D++   E ++ G+ +  +    V+ +
Sbjct: 339 EFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYH 374



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 479 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDETFCTALE 538

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG   GIDR+ M L  + N++EV LFP  +
Sbjct: 539 YGLPPTGGWGMGIDRVTMFLTDSNNIKEVLLFPAMK 574


>gi|319760399|ref|YP_004124337.1| lysyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039113|gb|ADV33663.1| lysyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 515

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 71/344 (20%), Positives = 135/344 (39%), Gaps = 29/344 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA- 62
           Y+TH   DL   ++   V +SG +   R  G   F+ ++D  G  Q+    +S   +   
Sbjct: 59  YKTH--EDLVALNI--QVNISGRIMTRRIMGKASFIVLKDGEGSIQLYITINSLLSKQIY 114

Query: 63  -KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
              ++   +  I G      A+ I     TG++ +    + +LS +   PLP        
Sbjct: 115 VNHLKQLDLGDIIG------AQGILFKTRTGELSIRCYNVMLLSKSLR-PLPSKFYGLNN 167

Query: 122 ESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
              +++ R+LDL  +    K   KR+ II  +R  M   +FIE  TPI+           
Sbjct: 168 SEKKYRQRYLDLIVNDKSSKIFKKRSLIIYKIRQFMKKYDFIEVETPIMHTIPGGAIARP 227

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            V      G    L  AP+ Y + L+  GF+R F+I   FR+ +  S     EF  +++ 
Sbjct: 228 FVTYHNKLGMHMYLRIAPELYLKKLIIGGFERIFEINRNFRN-ESISPYHNPEFTMMEVY 286

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +++ +  D+++  + +L  + E+    NT               +YG    + + P    
Sbjct: 287 IAYSDYKDMISFTQKLLSKLAEQIFKSNT--------------IQYGEYCLNFKEPFTKM 332

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           +V E  ++    V    ++            +     +   +++
Sbjct: 333 SVKEAIIYYLPEVKLNNINDMSIIVDILKKFEIQFNKKWSLEKL 376



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 10/125 (8%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE------ 502
            KKI         P       + ND  S  A +++L   GFEI +G    +  +      
Sbjct: 386 TKKIIQPTFITHYPTELSPLARCNDNDSKLADRFELFIAGFEIGNGFSELNDPDDQRDRF 445

Query: 503 ---VMLQAFSNVGISKEVVENRFG-GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              +  +  ++       + + +      A + G+PP  GI  GIDR+VMLL    N+R+
Sbjct: 446 LKQIQEKRMNSKNTDNTDIVHCYDEDYLTALEYGLPPTSGIGIGIDRLVMLLTNQHNIRD 505

Query: 559 VSLFP 563
           V LFP
Sbjct: 506 VILFP 510


>gi|167624184|ref|YP_001674478.1| asparaginyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189083479|sp|B0TUU1|SYN_SHEHH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|167354206|gb|ABZ76819.1| asparaginyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 466

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 69/389 (17%), Positives = 123/389 (31%), Gaps = 58/389 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVL 71
           +GS + + GWV   R    GI FL + D      +      N ++   E+ K      V+
Sbjct: 16  IGSQITVRGWVRSRRDSKAGISFLAVYDGSCFDPIQGVVPNNLENYTNEVLKLTAGCSVV 75

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G V+    +           E+   K+E++   E+        + +      +   L
Sbjct: 76  M-TGEVVESPGKGQA-------FEMQVTKLEVVGFVEDPDTYPMAAKRHSIEYLRELAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--- 188
             R + +      R  +  ++      + +I  STP++TAS  EGA +    S ++    
Sbjct: 128 RPRTNIIGAVARVRNCLSQAIHRFYNEQGYIWVSTPLITASDTEGAGEMFRVSTLDLENL 187

Query: 189 -----------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRTDKGTVDYSEDFFGKESFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ E++F   DD     E++L+  F+           F                    
Sbjct: 248 WMVEPEVAFANLDDAAKLAEDMLKYCFKAVLEERRDDLEFFAQRVEKTAIERLEAFVSSD 307

Query: 276 --RICYDDAIRRYGTDKPDLRNPIIM-HNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
             +I Y DAI        D    +    ++ +EH  +     F   + V    +      
Sbjct: 308 FAQIDYTDAIEILKACDKDFEYDVEWGIDLHSEHERYLAEEHFKAPVVVKNYPKDI---- 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 364 -KAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 6/99 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+    + + +S    +  +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGAQREERLDVLDARLAEMELS----QEDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G  PH G   G +R+V  + G  N+R+V  FP S    
Sbjct: 426 YGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPRSPKSA 464


>gi|154174894|ref|YP_001407789.1| lysyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|153793144|gb|EAT99544.2| lysyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 503

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/327 (18%), Positives = 129/327 (39%), Gaps = 15/327 (4%)

Query: 3   RYRTHSCGDLGVSD---VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           ++R      +   D    G +V L+G +  +R  G  IF +I D  G  Q+  +  +   
Sbjct: 38  KFRLKFAHIINTEDKKAEGQYVSLAGRIKLIRDAGKAIFANIEDENGNLQIYFSNKTLDS 97

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E  K V+    + +  ++  R          TG+  +   ++ + S A   PLP      
Sbjct: 98  EWFKVVKKN--IEVGDIIYVRG---YAFVTRTGEFSMHVSELNLASKAIS-PLPEKFHGL 151

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                R++ R+LDL  +   ++  K R+ II+++R  +  + F+E  TP++   +     
Sbjct: 152 VDIETRYRQRYLDLIMNPEVRSDFKKRSIIISTIRRFIEEKGFLEVETPMMHPIAGGANA 211

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
              V      G    L  AP+ Y + L+  GF+  + +   FR+E       P EF  ++
Sbjct: 212 KPFVTFHNALGVNRYLRIAPELYLKRLIVGGFEAVYDMNRNFRNEGMDLTHNP-EFTSIE 270

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR---- 294
              ++    D++   E +   + ++      +  + +++ +     R    K  +     
Sbjct: 271 FYWAYHTYHDLMGLTEELFNVLIDKLDLPKVIEFDGMQVDFSKPFARLNYKKALVEVGGL 330

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVN 321
           +P I+ +  +     +   F     ++
Sbjct: 331 DPQIIEDKDKILAKLKADGFEANAKLD 357


>gi|330445747|ref|ZP_08309399.1| asparaginyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489938|dbj|GAA03896.1| asparaginyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 466

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 125/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL I D      + A           + + E +    G
Sbjct: 16  VDSEVTVRGWVRSRRDSKAGISFLAIYDGSCFDPIQA----VVPNELNNYQDEVLKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  +   + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGTIVASPAKGQDFELAATNVKVVGWVEDADSYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   S P++TAS  EGA +    S ++        
Sbjct: 132 NVIGAVARVRNCLSQAIHRFYHEQGFFWMSAPLITASDCEGAGEMFRVSTLDMANLPMTD 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 KGEVDFDKDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F E DD+    E++L+ VF+                            V+++F ++
Sbjct: 252 PEVAFAELDDVAKLAEDMLKYVFKAVLEERRDDLEFFAQRIDKDAISRLEKFVTSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI+            +   +   +EH  +     F   + V    +          
Sbjct: 312 DYTDAIKILQDSGRKFEFDVEWGIDMSSEHERYLAEEHFQAPVIVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNDDGKTVAAMDVLAPGIGEII 391


>gi|160935859|ref|ZP_02083233.1| hypothetical protein CLOBOL_00752 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441101|gb|EDP18818.1| hypothetical protein CLOBOL_00752 [Clostridium bolteae ATCC
           BAA-613]
          Length = 463

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/352 (15%), Positives = 109/352 (30%), Gaps = 51/352 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVL 71
              +   + + GWV  +R      F+ + D      +    +     F     +     +
Sbjct: 14  EEYLDKEINVGGWVRSLRDSKAFGFIVVSDGSFFETLQIVYHDTLPNFAEVSKLSVGTAI 73

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G ++S               E+ A ++ +   +         ++ +          L
Sbjct: 74  LVKGTLVSTPQ-------AKQPFEIQAAEVTVEGTSSPDYPLQ--KKRHSLEYLRTISHL 124

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +T       R+ +  ++       +F+   TP++T S  EGA +    + ++    
Sbjct: 125 RARTNTFQAVFRVRSLVAYAIHQYFQERDFVYVHTPLITGSDCEGAGEMFQVTTMDLNNI 184

Query: 190 ------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q      A  F   +   P FR E+  + R   EF
Sbjct: 185 PKTEEGKVDFSQDFFGKATNLTVSGQLNAETYAMAFRNVYTFGPTFRAENSNTTRHAAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ EM+F + DD +   E +L+ +            NF                    
Sbjct: 245 WMIEPEMAFADLDDDMCLAEGMLKYIIRFVLEHAPEEMNFFNQFVDKGLLDRLHNVLNSE 304

Query: 276 --RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
             R+ Y +A++       +    +       TEH  +   +VF K + V   
Sbjct: 305 FGRVTYTEAVKILEEHNDEFDYKVSWGCDLQTEHERYLTEQVFKKPVFVTDY 356



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 51/139 (36%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P     +E K        F M           D  ++ A    LV    EI 
Sbjct: 349 KPVFVTDYP-----KEIK-------AFYMKM-------NPDNKTVAAVDC-LVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R      ++     +G+ K      +       + G   H G   G +R VM L G
Sbjct: 389 GGSQREDDYGRLVARMDELGLKK----EDYDFYLDLRKYGSTRHAGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N C+L
Sbjct: 445 MSNIRDVIPFPRTVNNCEL 463


>gi|146081824|ref|XP_001464365.1| lysyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134068457|emb|CAM66747.1| putative lysyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|322497768|emb|CBZ32844.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 586

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/273 (22%), Positives = 106/273 (38%), Gaps = 20/273 (7%)

Query: 3   RYRTHSCGDLGVSD--VGSFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPD--- 55
           +YR      L   D  +   V ++G +   R  G  + F+ I+ D   +  + A  D   
Sbjct: 93  QYRRKYAPLLTEPDTSLDETVTIAGRIINKRSSGSKLHFITIQGDMETVQVISALTDYID 152

Query: 56  -SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            S   EI   ++   ++ I G      +          +  L A +I +LS      LP 
Sbjct: 153 QSKFAEIHSKLKRGDIIGIAGRPSLSKSS---------EFSLKATEITLLSTCY-HMLPD 202

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                     RF+ R+LD   +    K  ++R  II  +R      +F+E  TP+L   +
Sbjct: 203 DYFGLSSFEQRFRQRYLDFIVNRDNIKTFIQRANIIKYIRKFFDERDFVEVETPMLNQIA 262

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    V    +      L  AP+ Y + L+  G DR ++I   FR+E       P E
Sbjct: 263 GGAAARPFVTHHNDLNQTMFLRIAPELYLKELVVGGMDRVYEIGKQFRNEGIDLTHNP-E 321

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           F   +   ++++  D +   E++L G+  E   
Sbjct: 322 FTSCEAYWAYMDYHDWMTATEDLLYGLAMELHG 354


>gi|85057408|ref|YP_456324.1| lysyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|123725349|sp|Q2NJZ8|SYK_AYWBP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|84789513|gb|ABC65245.1| lysyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 496

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 55/303 (18%), Positives = 117/303 (38%), Gaps = 14/303 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G +   R  G   FL ++D     Q     D    +  +  ++  +  I G+    
Sbjct: 59  VCVAGRIVLKRGQGKAGFLHLQDFDFRIQAYVKLDLVGKDAFQIYQNCDLGDIIGI---- 114

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +       T ++ + A +   L+ A + PLP             K R++DL  +   +
Sbjct: 115 --KGFLFKTKTQELTIKALEFIHLTKALK-PLPDKFHGLQNREDMRKKRYVDLIVNEKTR 171

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAP 198
            +   R+ I+  +R     + F+E  TPIL  +     A+ F+         FY L  A 
Sbjct: 172 QVFLTRSLIMKYIRNFFDNQGFLEVETPILQPTLGGASAKPFITHHNALNCDFY-LRIAT 230

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L+  G ++ ++I   FR+E   +   P EF  ++  +++ +  DI++  +  L+
Sbjct: 231 ELPLKKLIVGGMNKVYEIGRLFRNEGIDATHNP-EFSTIEAYLAYADMQDIMDLTKQCLQ 289

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
            + ++       +     I +    +         +  I   + T+HF   +    +K  
Sbjct: 290 ELVQKIFGKLQFTYQNQEIDFSHFAKVSMVASIKEKTGI---DFTDHFTLEQCLSLAKKH 346

Query: 319 SVN 321
            + 
Sbjct: 347 KIE 349



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 50/125 (40%), Gaps = 6/125 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +      +  P       K N+       +++L   G E A+     +      + F
Sbjct: 369 ENALIQPTFVYGHPLEISPLAKQNEFDPRFTDRFELFIVGKEFANAFRELNDPIEQEKRF 428

Query: 509 SNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP- 563
            N    K+       +       A   GMPP GG+  GIDR+VMLL    N+R+V LFP 
Sbjct: 429 LNQLKQKQLGNEEANDMDYDFLNALNYGMPPTGGLGMGIDRLVMLLTDTANIRDVILFPH 488

Query: 564 -MSQN 567
             +QN
Sbjct: 489 CKNQN 493


>gi|242006633|ref|XP_002424153.1| asparaginyl-tRNA synthetase, cytoplasmic, putative [Pediculus
           humanus corporis]
 gi|212507478|gb|EEB11415.1| asparaginyl-tRNA synthetase, cytoplasmic, putative [Pediculus
           humanus corporis]
          Length = 552

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 68/344 (19%), Positives = 127/344 (36%), Gaps = 22/344 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
                   V++ GWVHR+R  G  +IF+ +RD  G  Q V N        A  + +E  +
Sbjct: 124 STEYRDKRVKIYGWVHRLRRQGKSLIFITLRDGTGFLQCVLNDLLCQSYEALILSTESTV 183

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  EL     +++ +A           E    I+   R +
Sbjct: 184 LLYGTLKKLPEG----KTAPGGHELHVDYWKLIGLAPPGGAENILNEEAHIDIQLDNRHI 239

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R+ ++ + R       + E + P L  +  EG       +   + ++
Sbjct: 240 MIRGENTAKVLKMRSVVMQAFRDHYAERGYYEVTPPTLVQTQVEGGSTLFKLNYFGEEAY 299

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  +AS     F IA  +R E  R+ R   E+  ++ E  F++ ++ LN
Sbjct: 300 --LTQSSQLYLETCLAS-MGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFIDYEEFLN 356

Query: 252 TMENVLRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            +E++L  V ++               +       F R+ Y DAI+ Y  +    +    
Sbjct: 357 RVEDLLTDVVDKVLKSSHGHLVYELNPDFKPPKKPFKRMDYADAIK-YLKENNITKEDGS 415

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
            +   E       R  +  ++       + +  K     R   D
Sbjct: 416 FYEFGEDIPEMPERKMTDQINEPIMLCRFPVNIKSFYMARCAED 459



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 5/83 (6%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D++  G  EI  G +R+   + ++  F    I+       +       + G  PHGG   
Sbjct: 467 DVLLPGVGEIIGGSMRSWDEKELIDGFVRNNINP----EPYYWYIDQRKYGSCPHGGYGL 522

Query: 542 GIDRIVMLLLGAKNVREVSLFPM 564
           G++R +  LL   ++REV L+P 
Sbjct: 523 GLERFMCWLLNRYHIREVCLYPR 545


>gi|210617003|ref|ZP_03291338.1| hypothetical protein CLONEX_03560 [Clostridium nexile DSM 1787]
 gi|210149526|gb|EEA80535.1| hypothetical protein CLONEX_03560 [Clostridium nexile DSM 1787]
          Length = 463

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 117/357 (32%), Gaps = 51/357 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   + + GW+  +R      F+ + D       QVV +     F     +     
Sbjct: 13  REQYLDKEITVGGWIRSIRDSKTFGFIVVNDGTFFETLQVVYHDTMENFADISKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A ++ +   +     P+  +R   E +R     
Sbjct: 73  IIVKGTLVATPQ-------AKQPFEIQATEVVVEGASAPDY-PLQKKRHSFEYLR-TISH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ I  ++        F+   TPI+T S  EGA +    + ++   
Sbjct: 124 LRPRTNTFQAVFRVRSLIAYAIHQFFQERGFVYVHTPIITGSDCEGAGEMFRVTTLDMEN 183

Query: 190 -------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+    +     Q      A  F   +   P FR E+  + R   E
Sbjct: 184 IPKNEDGTVDYSQDFFNKETSLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSN 272
           F+ ++ E++F + DD +   E +L+ +                            N  S+
Sbjct: 244 FWMVEPEIAFADLDDNMMLAEAMLKYIINYVLENAPEEMNFFNSFVDKGLLDRLHNVASS 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           +F R+ Y +AI     +       +       TEH  +    V+ + + V    +  
Sbjct: 304 DFARVTYTEAIEILEKNNDKFDYKVSWGADLQTEHERYLTEEVYKRPVFVTDYPKDI 360



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 52/150 (34%), Gaps = 24/150 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +         ++ D+P        K I      F M          ND     A  
Sbjct: 338 HERYLTEEVYKRPVFVTDYP--------KDIKA----FYMKM--------NDDNKTVAAV 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    E +L   + +G+  E  +          + G   H G   
Sbjct: 378 DCLVPGIGEIIGGSQREDNYEKLLARMNEMGLKPEEYQ----FYLDLRKYGSTRHAGFGL 433

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R VM L G  N+R+V  FP + N C+L
Sbjct: 434 GFERCVMYLTGMSNIRDVLPFPRTVNNCEL 463


>gi|89073955|ref|ZP_01160461.1| asparaginyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89050283|gb|EAR55787.1| asparaginyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 466

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 71/387 (18%), Positives = 126/387 (32%), Gaps = 54/387 (13%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYG---ITQVVANPDSACFEIAKSVRSEWVLC 72
           V S V + GW+   R    GI FL I D      I  VV N  +   E    + +   + 
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNELNNYQEEVLKLTTGCSVE 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G +++  A+           EL+A  ++++   E+       +  +      +   L 
Sbjct: 76  VTGTIVASPAKG-------QDFELAATNVKVVGWVEDADSYPMAKTRHSIEYLREVAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----- 187
            R + +      R  +  ++      + FI  S P++TAS  EGA +    S ++     
Sbjct: 129 PRTNVIGAVARVRNSLSQAIHRFYHEQGFIWMSAPLITASDCEGAGEMFRVSTLDMANLP 188

Query: 188 ---------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 189 MTDKGEVDFDKDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            ++ E++F + DD     E++L+ VF+                            V+++F
Sbjct: 249 MVEPEVAFADLDDAAKLAEDMLKYVFKAVLEERRDDLEFFASRIDKEAITRLEQFVTSDF 308

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
            ++ Y DAI+            +         + SE   F           V   P    
Sbjct: 309 AQVDYTDAIQILQDSGRKFEFDVEWG----IDMSSEHERFLAEEHFKAPVIVKNYPKDIK 364

Query: 335 GGNRAFCDR-MNEWARSQGQPGLAYIF 360
                  D      A     PG+  I 
Sbjct: 365 SFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 6/99 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +++      +GI                +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDILDARMIEMGIDP----EHMSWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 426 YGSVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|312137569|ref|YP_004004905.1| lysyl-tRNA ligase lyss [Rhodococcus equi 103S]
 gi|311886908|emb|CBH46216.1| lysyl-tRNA ligase LysS [Rhodococcus equi 103S]
          Length = 1100

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 11/256 (4%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      S  G+ VR++G + R+R +GG+ F  +RD  G  QV+    +    +   +
Sbjct: 646 THTVAAATSSPEGTRVRIAGRLLRIRTYGGVAFAVLRDWSGDIQVLIERTT----VGDRL 701

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                    G +M  S     +    G++ L A +  +       PLP   +       R
Sbjct: 702 DEFSTDFDLGDLMEVSGTIGRSR--KGELSLLATEWRMNGKCL-HPLPDKWKGLTDAETR 758

Query: 126 FKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
            + R++DL       + +  RT I+ S+R  +   +++E  TPIL        A  F+  
Sbjct: 759 VRQRYVDLAINPESRRLLAARTAIVKSLRDTLAGRDYLEVETPILQRIHGGANAAPFVTH 818

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ + + L  +G ++ F+I   FR+E       P EF  L+   + 
Sbjct: 819 INAYDLDLY-LRIAPELFLKRLCVAGMEKVFEIGRVFRNEGVDFKHNP-EFTILEAYEAH 876

Query: 244 VEQDDILNTMENVLRG 259
            + + ++     +++ 
Sbjct: 877 SDYERMMVLCRELIQA 892



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 49/130 (37%), Gaps = 19/130 (14%)

Query: 438  MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
             +FP +  N        + +P T P   +            A ++DLV  G E+ +    
Sbjct: 980  TEFPTFYTN-----FPTSMSPLTRPHPTIP---------GVAAKWDLVAWGVELGTAYSE 1025

Query: 498  NHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
                    +  +   +                 +A +  MPP GG+  G+DRIVML+ G 
Sbjct: 1026 LTDPIDQRRRLTEQSLLAAGGDAEAMELDEDFLQALEHAMPPTGGLGMGVDRIVMLITG- 1084

Query: 554  KNVREVSLFP 563
             ++RE   FP
Sbjct: 1085 GSIRESLAFP 1094


>gi|325677462|ref|ZP_08157126.1| lysine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325551709|gb|EGD21407.1| lysine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 1121

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 11/256 (4%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      S  G+ VR++G + R+R +GG+ F  +RD  G  QV+    +    +   +
Sbjct: 667 THTVAAATSSPEGTRVRIAGRLLRIRTYGGVAFAVLRDWSGDIQVLIERTT----VGDRL 722

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                    G +M  S     +    G++ L A +  +       PLP   +       R
Sbjct: 723 DEFSTDFDLGDLMEVSGTIGRSR--KGELSLLATEWRMNGKCL-HPLPDKWKGLTDAETR 779

Query: 126 FKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
            + R++DL       + +  RT I+ S+R  +   +++E  TPIL        A  F+  
Sbjct: 780 VRQRYVDLAINPESRRLLAARTAIVKSLRDTLAGRDYLEVETPILQRIHGGANAAPFVTH 839

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ + + L  +G ++ F+I   FR+E       P EF  L+   + 
Sbjct: 840 INAYDLDLY-LRIAPELFLKRLCVAGMEKVFEIGRVFRNEGVDFKHNP-EFTILEAYEAH 897

Query: 244 VEQDDILNTMENVLRG 259
            + + ++     +++ 
Sbjct: 898 SDYERMMVLCRELIQA 913



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 49/130 (37%), Gaps = 19/130 (14%)

Query: 438  MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
             +FP +  N        + +P T P   +            A ++DLV  G E+ +    
Sbjct: 1001 TEFPTFYTN-----FPTSMSPLTRPHPTIP---------GVAAKWDLVAWGVELGTAYSE 1046

Query: 498  NHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
                    +  +   +                 +A +  MPP GG+  G+DRIVML+ G 
Sbjct: 1047 LTDPIDQRRRLTEQSLLAAGGDAEAMELDEDFLQALEHAMPPTGGLGMGVDRIVMLITG- 1105

Query: 554  KNVREVSLFP 563
             ++RE   FP
Sbjct: 1106 GSIRESLAFP 1115


>gi|147903525|ref|NP_001080633.1| lysyl-tRNA synthetase [Xenopus laevis]
 gi|28838485|gb|AAH47965.1| Krs-1-prov protein [Xenopus laevis]
          Length = 605

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 112/262 (42%), Gaps = 10/262 (3%)

Query: 15  SDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             +   V ++G +H  R  G  +IF D+R      QV+AN  S  ++  +   +      
Sbjct: 132 EQLSEIVSVAGRIHAKRISGAKLIFYDLRGEGTKLQVMAN--SRFYKSEEEFTAINNKLR 189

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++             G++ +   ++ +LS      LP        +  R++ R+LDL
Sbjct: 190 RGDLIGVKGNP--GKTKKGELSILPHEMTLLSPCL-HMLPHLHFGLKDKETRYRQRYLDL 246

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSF 191
              D + +  + R ++I  +R  +    F+E  TP++        A+ F+          
Sbjct: 247 ILNDYVRQKFIVRAKLITYLRKFLDNLGFLEIETPMMNIIPGGAVAKPFITYHNDLDMKL 306

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++ 
Sbjct: 307 Y-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYNDLME 364

Query: 252 TMENVLRGVFEEFSNGNTVSNN 273
             E +L G+ +  + G  V  +
Sbjct: 365 ITEKLLSGMVKHITGGYKVPYH 386



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      + F +   +K   ++           A +
Sbjct: 491 EKGLTERFELFVMKKEICNAYTELNDPFRQRELFEDQAKAKAAGDDEAMFIDETFCTALE 550

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 551 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMK 586


>gi|307595594|ref|YP_003901911.1| asparaginyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307550795|gb|ADN50860.1| asparaginyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 429

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/308 (20%), Positives = 124/308 (40%), Gaps = 26/308 (8%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAKSVR 66
           S  D+   + G+ V + GWV+R R     IFL +RD  GI Q V N  D     IA  + 
Sbjct: 2   SIKDVFSLNEGAEVTIRGWVYRKRELKDKIFLVVRDGSGIIQAVINKSDPNTAGIASKLN 61

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  L + G+V              G  E+  + I+   + +  P+      +       
Sbjct: 62  IESSLMLTGVVKKEPR-------APGGAEVHVRSIDWYYIGDPFPI-NEDAAKADSEYLL 113

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L +R   +   +  R  +  ++     +  + E   P+  +++ EG          
Sbjct: 114 DVRHLWIRSRRMWAILRVRHTVFGAIHEFFRSRGYYEVQGPMFVSAAVEGGATLFPVKYF 173

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           ++   Y L Q+ Q Y ++L+ +  ++ + +AP FR E  R+ R   EF+  + E ++++ 
Sbjct: 174 DREDVY-LTQSSQFYLEVLIYT-LEKVYTVAPSFRAEPSRTRRHLTEFWHAEAEEAWLQF 231

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRYGTDKP 291
           D +LN +E+++  +  +                         F R+ YD+AI    +   
Sbjct: 232 DGLLNLLEDLITYIVNKVLEERQDELKLLNRDTKILENVKPPFYRVSYDEAIEILQSKGL 291

Query: 292 DLRNPIIM 299
           +++    +
Sbjct: 292 NIKWGDDI 299



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  GG R +  E +L      G+        +       + G  PH G   G+DR+VM 
Sbjct: 352 EIVGGGERIYDYEELLSKIKKFGLKP----EDYDWYLDLRRYGSVPHAGFGLGVDRLVMW 407

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G  ++R+   FP        
Sbjct: 408 VCGLDHIRDALPFPRDIRRVKP 429


>gi|158520113|ref|YP_001527983.1| asparaginyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158508939|gb|ABW65906.1| asparaginyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 445

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 75/326 (23%), Positives = 125/326 (38%), Gaps = 35/326 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           VR+ GWV   R    + FL+I D   +   QVVA      FE  + + S   + + G ++
Sbjct: 19  VRVCGWVKTCRNSKALSFLEINDGSCLQSLQVVAPAQLDNFEQVQKLLSGSAVAVSGDLV 78

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           +  A+         Q EL+A++++I+S  +E   P+  +R   E +R     L  R +  
Sbjct: 79  ASPAKG-------QQWELAARRVDIVSRTDETY-PLQKKRHSDEFLR-TIAHLRPRTNKY 129

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL-VPSRVNQGSFYALPQA 197
                 R+    ++   +  + F    TPILT S  EGA +   V SR            
Sbjct: 130 SALFRLRSEAGFAIHSYLRDQGFFHVHTPILTGSDCEGAGELFSVTSRSPLFDRDVFLTV 189

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
             Q    + A    R +   P FR E   + R   EF+ ++ E++F   +  ++  +  +
Sbjct: 190 SGQLAAEMFALCLGRVYTFGPVFRAEHSNTARHAAEFWMVEPEIAFCNLEQNMDFAQAFV 249

Query: 258 R--------------GVFEEFSNG-------NTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +               +F  F +        N +++ F RI Y  AI             
Sbjct: 250 KQTVTHMVENCGPDMDLFSRFVDPELPATLDNILASEFERISYKTAIDLLVRSGTAFSFT 309

Query: 297 IIMHN--VTEHFVHSEFRVFSKILSV 320
               N   TEH  +    VF K + V
Sbjct: 310 PEYGNDLQTEHERYLTETVFKKPVFV 335



 Score = 85.1 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 17/126 (13%)

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P + ++        A  PF M        + ND     A    LV    E+  G  R   
Sbjct: 332 PVFVYD-----YPRAIKPFYM--------RVNDDGRTVAAMDLLVPRIGELIGGSQREER 378

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            +V+ Q   N G+SK    + +G    + + G   H G   G +R +ML+ G  N+R+V 
Sbjct: 379 LDVLEQQMDNSGLSK----DHYGWYLDSRRYGSVAHSGFGMGFERFLMLVSGVSNIRDVI 434

Query: 561 LFPMSQ 566
            FP + 
Sbjct: 435 PFPRTP 440


>gi|119774820|ref|YP_927560.1| asparaginyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166231672|sp|A1S684|SYN_SHEAM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|119767320|gb|ABL99890.1| asparaginyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 466

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 68/387 (17%), Positives = 120/387 (31%), Gaps = 56/387 (14%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYG---ITQVVANPDSACFEIAKSVRSEWVLCI 73
           G+ + + GWV   R    GI FL + D      I  VV N  S   +    + +   + +
Sbjct: 17  GTEITVRGWVRTRRDSKAGISFLAVYDGSCFDAIQGVVPNALSNYNDEVLKLTAGCSVEM 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++                EL A  +++    ++        + +          L  
Sbjct: 77  TGNLVESPGSGQA-------FELQATAVKVTGWVDDPDTYPMAAKRHSIEHLRDVAHLRP 129

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG---- 189
           R + +      R  +  ++        FI  STPI+TAS  EGA +    S ++      
Sbjct: 130 RTNIIGAVARVRNCLSQAIHRFYHENGFIWVSTPIITASDCEGAGEMFRVSTLDMENLPR 189

Query: 190 ----------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+   A      Q      A    + +   P FR E+  + R   EF+ 
Sbjct: 190 TDAGKVDYDQDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWM 249

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL--------------------- 275
           ++ E++F + +DI    E++L+  F            F                      
Sbjct: 250 VEPEVAFADLNDIAGLAESMLKYCFNAVLQERMDDMKFFAERVDGSVIDRLQSFVSSDFA 309

Query: 276 RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           ++ Y DA+            P+   +   +EH  +     F   + V    +        
Sbjct: 310 QVDYTDAVEILQNCGKTFEYPVEWGIDLQSEHERYLAEEHFKAPVVVKNYPKDI-----K 364

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIF 360
               R   D     A     PG+  I 
Sbjct: 365 AFYMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 7/101 (6%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      + +SK      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARLEEMNLSK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            + G  PH G   G +R+V  + G  N+R+V  FP +    
Sbjct: 424 RRYGTVPHAGFGLGFERLVSYVTGVGNIRDVIPFPRAPRSA 464


>gi|119871889|ref|YP_929896.1| asparaginyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119673297|gb|ABL87553.1| asparaginyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 431

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 101/246 (41%), Gaps = 13/246 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + GWV+R R     +F+ +RD  GI Q+V   D   F+IA+ +  E  + + GL++  
Sbjct: 21  VTVRGWVYRKRVLKEKVFVVLRDSTGIIQLVFPRDR--FKIAEELNIESSIVVSGLLVKE 78

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G +EL  + I+ + + E  P+                R L LR   +  
Sbjct: 79  PR-------APGGVELHVESIDWVYIGEPYPI-NEDAVTADSEYLLDVRHLWLRSRKMQA 130

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
            +  R  +  ++        F E   P+   ++ EG            G    L Q+ Q 
Sbjct: 131 VLKIRHTVFEALHHYFRKNGFYEVQAPMFITAAVEGGATLFRVDYF--GRPVYLTQSSQF 188

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+ S  ++ + IAP FR E  R+ R   EF+  +MEM++   +D     E V+   
Sbjct: 189 YLEALIYS-LEKVYTIAPSFRAEPSRTRRHLTEFWHAEMEMAWASMEDAARVGEEVISYT 247

Query: 261 FEEFSN 266
            E+   
Sbjct: 248 VEKVLQ 253



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 6/104 (5%)

Query: 470 KGNDLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           + N         +D++      E+  GG R + ++ ++      G++ E  +        
Sbjct: 332 RNNPQRPEVTLSFDVLLPEGYGEVIGGGERIYDAKELIDKIIRFGLNPEDYQ----WYID 387

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             + G  PH G   G+DR+VM + GA ++R+V  FP        
Sbjct: 388 LRRYGSVPHSGFGLGVDRLVMWITGADHIRDVVPFPRDIRRTKP 431


>gi|319426567|gb|ADV54641.1| asparaginyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 466

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 68/389 (17%), Positives = 119/389 (30%), Gaps = 50/389 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    GI FL + D      +     ++       V    + 
Sbjct: 12  GEHAVGSKVTVRGWVRTRRDSKAGISFLAVYDGSCFNPIQGVVPNSLENYDNEV----LK 67

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  + + + +       EL   ++E+    ++        + +      +   L
Sbjct: 68  LTAGCSVVMTGDVVESPGAGQAFELQVTELEVAGWVDDPDTYPMAAKRHSIEHLRELAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R + +      R  +  ++      E FI  STP++TAS  EGA +    S ++    
Sbjct: 128 RPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVSTLDMENL 187

Query: 190 ------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRTSEGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ E++F    DI    E +L+  F            F                    
Sbjct: 248 WMVEPEVAFATLSDIAGLAEAMLKYAFNAVLTERMDDLQFFAQHVDKTVIERLQSFVSSD 307

Query: 276 --RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
             ++ Y DA+            P+   +   +EH  +     F   + V    +      
Sbjct: 308 FAQVDYTDAVDILQKCGKAFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDI---- 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 364 -KAFYMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + + ++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDMRLAEMDLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+V  + G  N+R+V  FP +  
Sbjct: 424 RRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPRAPR 462


>gi|221481971|gb|EEE20337.1| lysyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
 gi|221505048|gb|EEE30702.1| lysyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 658

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 20/269 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF------EIAKSV 65
           G       V+++G + RV   G  + F DIR      QV++N            E+    
Sbjct: 177 GEHLENEEVQIAGRISRVSASGQKLRFYDIRGDGEKIQVMSNFSYHDEKAGDFSEVHNRF 236

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           R   V+ I G                G++ +  +++ +LS    +       +++   +R
Sbjct: 237 RRGDVIGIRG---------FPGKSKRGELSIFPREVTLLSPCLHMLPERNSLKDF--EVR 285

Query: 126 FKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           F++R+LDL  +    K  + R+RI+N +R  +    F+E  TP++   +   A       
Sbjct: 286 FRHRYLDLMVNDETRKTFLIRSRIVNYLRRFLEDRGFVEVETPMMNVIAGGAAARPFKTH 345

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             +      +  AP+ + ++L+  G DR F+I   FR+E       P EF   +   ++ 
Sbjct: 346 HNDLDMDLYMRIAPELFLKMLIVGGMDRVFEIGKNFRNEGIDMTHNP-EFTACEFYWAYA 404

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           + +D++N  E ++  +         +  +
Sbjct: 405 DYNDLMNFTEELVSSMVMALHGTYQIQFH 433



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 50/134 (37%), Gaps = 10/134 (7%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
            K +    +P  M           +L      +++L   G E+ +     +      + F
Sbjct: 515 TKPVFITEHPQIMSPLAKWHRSKPEL----TERFELFLMGKELCNAYTELNDPVRQRECF 570

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +   +K   ++           A + G+PP GG   GIDR+ M L     ++EV LFP 
Sbjct: 571 MDQAKAKAAGDDEATCIDEVFCTALEYGLPPTGGWGIGIDRLTMFLSDHNTIKEVILFPA 630

Query: 565 SQNFCDLLMGSPST 578
            +     L+G P  
Sbjct: 631 MRPQ--PLVGIPGK 642


>gi|167748001|ref|ZP_02420128.1| hypothetical protein ANACAC_02738 [Anaerostipes caccae DSM 14662]
 gi|167652578|gb|EDR96707.1| hypothetical protein ANACAC_02738 [Anaerostipes caccae DSM 14662]
          Length = 461

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/345 (18%), Positives = 120/345 (34%), Gaps = 49/345 (14%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             + L GWV   R      FL I D       Q+V   + + F   K +     + + G+
Sbjct: 19  KELSLCGWVRSNRDSRDFGFLVINDGTFFEPIQIVYGKELSNFTEVKKLSVGTAVIVKGI 78

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +                 E+ A+ +E+   +     P+  +R   E +R     L  R +
Sbjct: 79  LTETPD-------ARQPFEIQAESVEVEGES-PSDYPLQKKRHSFEYLR-TIAHLRPRAN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--------- 187
           T       R+ I  ++    +  +F+   TPI++    EGA +    + ++         
Sbjct: 130 TFQAVYRVRSLIAYAIHKFFMERDFVYVHTPIISGQDCEGAGEMFQVTTLDLEELSQGKK 189

Query: 188 ---QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
              +  F+    +     Q      A  F   +   P FR E+  + R   EF+ ++ EM
Sbjct: 190 LDYREDFFERETSLTVSGQLNGEAFAQAFRNIYTFGPTFRAEESNTTRHAAEFWMIEPEM 249

Query: 242 SFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRICYD 280
           +F + +D +   E++++ + +                          +   + F RI Y 
Sbjct: 250 AFADLEDNMLLAEHMIKYIIQYVLEQAPEEMGFFNKFVDKGLLDRLHHVAESEFARITYT 309

Query: 281 DAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
           +AI          + P+       TEH  +   +VF K + V   
Sbjct: 310 EAIDILKEHNNMFQYPVSWGTDLQTEHERYLTEKVFKKPVFVTDY 354



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 26/150 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +  ++ D+P     +E K      NP              D  ++ A  
Sbjct: 336 HERYLTEKVFKKPVFVTDYP-----KEIKAFYMKQNP--------------DGKTVAAV- 375

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  EI  G  R    E +      + ++       +       + G   H G  
Sbjct: 376 -DLLVPGIGEIIGGSQREDDLEKLQMRMGELEMNLSD----YDFYLDLRKYGSTRHSGFG 430

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R+VM L G  N+R+V  FP +   C+
Sbjct: 431 LGFERMVMYLTGMANIRDVIPFPRTAGKCE 460


>gi|145518141|ref|XP_001444948.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124412381|emb|CAK77551.1| unnamed protein product [Paramecium tetraurelia]
          Length = 647

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 96/579 (16%), Positives = 175/579 (30%), Gaps = 108/579 (18%)

Query: 3   RYRTHS---CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC 58
           ++R      C + G      FV ++G V  +R  G  ++F D++      QV+AN  +  
Sbjct: 128 QFRDKYGPLCTEKGKIHED-FVSVAGRVVTIRSMGAKLMFYDLQGEGTKIQVMANEANHK 186

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            +   S      L   G ++             G++ ++   I++LS      LP     
Sbjct: 187 DQEY-SFEKVHTLIKRGDIIGVKGNPCLTKA--GELSIAPGFIQLLSPTL-HMLPTAHFG 242

Query: 119 EYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                 R++ R+LDL  +  +    + R+ +I  +R     + FIE  TP L        
Sbjct: 243 FKDHEQRYRMRYLDLIMNKKVRDIFLTRSSVIKQLREYFDGKGFIEVETPSLNVIQGGAT 302

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                    +      +  AP+ Y ++L+  G DR ++I                     
Sbjct: 303 AKPFKTFHNSLHRDLFMRVAPELYLKMLIVGGLDRVYEIG-------------------- 342

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG--TDKPDLRN 295
                                   + F N      +        A+  Y    D  DL  
Sbjct: 343 ------------------------KNFRNEGIDQTHNPEFT---AMEFYWAYCDYNDLMT 375

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
                  +          F      NP   +     K G       D +           
Sbjct: 376 VTEEVLSSIVLKLKGSYKFKIHKGDNPTITLTEHDIKSGHFKENEEDFIE---------- 425

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF--CSFA 413
                        V+ M  + K L       +   L+ ++ ++ F       K    +  
Sbjct: 426 ----LDFTPPWPRVSMMAELEKKLGE----KLPEVLESEEANAFFVEQAKKHKVECSNPR 477

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDF--PFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
             AR        +I+     F   ++F  P +  +          +P  M        + 
Sbjct: 478 TTAR--------LIDKLVGHFL-EVNFRNPTFLID----------HPQLMSPLSKVHRQY 518

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM----LQAFSNVGISKEVVENRFGGLYR 527
                    +++L  N  E+ +     +   V      +   +     +       G  +
Sbjct: 519 P----GLTERFELFVNYHELCNAYTELNDPFVQKALFQKQVEDAAKGDDEAMGYDEGFIK 574

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + +  +PP  G   GIDR VMLL   +N++EV LFP  +
Sbjct: 575 SLEHALPPTAGWGLGIDRFVMLLTDTQNIQEVLLFPAMK 613


>gi|157165521|ref|YP_001467461.1| lysyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|112800973|gb|EAT98317.1| lysyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 503

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/286 (21%), Positives = 117/286 (40%), Gaps = 17/286 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V L+G +  +R  G  +F +I D  G  Q+  +  +   E  K V+    + I  +V
Sbjct: 56  GQLVGLAGRIKLIRDAGKAVFANIEDENGNLQIYFSNKTLDPEWFKIVKKY--VEIGDIV 113

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD- 136
             R          TG+  +   ++ + + +   PLP           R++ R+LD+  + 
Sbjct: 114 YVRG---YAFITRTGEFSMHVNELSLATKSIS-PLPEKYHGLVDVETRYRQRYLDMIMNP 169

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +  +  KR+ II+++R     + F+E  TP+L   +        V      G    L  
Sbjct: 170 EVRADFKKRSVIISTIRRFFEEKGFLEVETPMLHPIAGGANAKPFVTFHNALGVERYLRI 229

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  GF+  +++   FR+E       P EF  ++   ++    D++   E++
Sbjct: 230 APELYLKRLVVGGFEAVYEMNRNFRNEGMDLTHNP-EFTSIEFYWAYHNYHDLMGITEDL 288

Query: 257 LRGV-----FEEFSNGNTVS----NNFLRICYDDAIRRYGTDKPDL 293
              +      E+  N + +       F RI Y  A+   G    D+
Sbjct: 289 FNVILEKLGMEKVINFDGMEIDFSKPFKRISYKKALVEIGGLAEDI 334


>gi|227538436|ref|ZP_03968485.1| asparagine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241718|gb|EEI91733.1| asparagine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 481

 Score =  176 bits (446), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 122/356 (34%), Gaps = 32/356 (8%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           T     L  ++ G  V + GWV   R +    F+ I D   I  + A  D    + A   
Sbjct: 4   TRIKELLNATEFGQEVIVKGWVRTFRNNQ---FIAINDGSSINNIQAVVDFENTDDA--- 57

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                    G  +      I +     ++E+   +++++  ++    P+  ++   E +R
Sbjct: 58  --LLKRITTGAAVRVKGTLIESLGKGQKVEVKVTELDVIGDSDPEKFPLQPKKHSLEFLR 115

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            +   L  R  T +     R  +  ++       +F+   TPI+T S  EGA +    + 
Sbjct: 116 -EIAHLRFRTGTFNAIFKVRNALSFAVHRFFNERDFVYMHTPIITGSDAEGAGEMFRVTT 174

Query: 186 VN--------------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           ++              +  F+          Q +  L A  F   +   P FR E+  + 
Sbjct: 175 LDLNNPPRTENGEIDFKEDFFGKSTNLTVSGQLEGELAALAFGNIYTFGPTFRAENSNTT 234

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           R   EF+ ++ EM+F E +D ++  E +L+ V             FL+   +  +     
Sbjct: 235 RHLAEFWMIEPEMAFYELEDNMDLAEALLKYVIRYALETCPEEIEFLK---NRLLEEEKN 291

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                R+ +   ++ E         F ++   +    +           +   D  
Sbjct: 292 KPAADRSDM---DLIEKLKFCLENEFERVKYTDAIEILKRSKPNQKKQFKYLIDEW 344



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 20/146 (13%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +  +   + D+P      E K        F M Q   ++L  N + ++    
Sbjct: 352 HERYLVEKHFKKPVILTDYP-----REIKS-------FYMKQNEPDTLGRNTVRAMDI-- 397

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     E+  G  R    + +L   + VGI  E +E          + G  PH G   
Sbjct: 398 --LFPGIGEMVGGSQREENLDKLLARMAEVGIPAEEME----WFLDTRRFGSVPHSGFGV 451

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+V+ + G  N+R+V  FP +  
Sbjct: 452 GFERLVLFVTGMTNIRDVIPFPRTPK 477


>gi|326384068|ref|ZP_08205751.1| lysyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326197228|gb|EGD54419.1| lysyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 510

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 58/267 (21%), Positives = 104/267 (38%), Gaps = 18/267 (6%)

Query: 5   RTHSCGDLGVS--------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  ++           + G  V ++G +  +R  G + F  +++  G         +
Sbjct: 47  RTHSLAEIRAQYPDLEAGTETGEQVGVAGRIIFLRNKGKLCFATLQEGDGTQLQAMVSFN 106

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E A  +         G ++    E I++   TG++ + A   E+ S A         
Sbjct: 107 GVGEEA--LARWKADTDLGDIVFVHGEVISSR--TGELSIMADSWEMASKALRPLP--VA 160

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
            +E  E  R + R++DL  R         R  ++  +R  M    F+E  TP+L      
Sbjct: 161 HKEMNEESRVRQRYVDLIVRPEARAIARTRVEVMAQLRKFMTDRGFLEVETPMLQTLHGG 220

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+  S       + L  AP+ + +  +  G +R F++   FR+E   S   P EF
Sbjct: 221 AAARPFVTHSNAFDMDLF-LRIAPELFLKRCVVGGIERVFEVNRNFRNEGADSTHSP-EF 278

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVF 261
             L+   ++   DD       +++ V 
Sbjct: 279 AMLETYQAYGTYDDAAVMTRELVQSVA 305



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 67/204 (32%), Gaps = 31/204 (15%)

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDM-QDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           E   ++    +++ L      A     ++ +  D           +          + + 
Sbjct: 327 EWTELSMYPSLSEALGEEIVPAQTTVDELLKIADRVGLEVPKDKGYGH--GKLVEELWEH 384

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L  +     E  ++ DFP      E   +  +H                  +     ++D
Sbjct: 385 L--VGSKLDEPVFVRDFPV-----ETSPLVRSHR----------------SIPGVVEKWD 421

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGI 539
           L   GFE+A+G        +  + F +        ++           A + GMPP  G 
Sbjct: 422 LYVRGFELATGYSELVDPVIQRERFVDQARLAAAGDDEAMVLDEEFLVAMEHGMPPTAGT 481

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             GIDR++M L G   +RE  LFP
Sbjct: 482 GMGIDRLLMALTGLG-IRETVLFP 504


>gi|315180018|gb|ADT86932.1| asparaginyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 466

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 122/388 (31%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVL 71
           V S V + GW+   R    GI FL I D      + A    N ++   E+ K      V 
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNNLNNYNDEVLKLTTGCSV- 74

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G V+   A            EL+A  ++++   E+       +  +      +   L
Sbjct: 75  EVTGKVVESPASGQA-------FELAATDVKVVGWVEDADTYPMAKTRHSIEYLREVAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--- 188
             R + +      R  +  ++      + +   S P++TAS  EGA +    S ++    
Sbjct: 128 RPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENL 187

Query: 189 -----------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRTDAGKVDYNEDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ E++F E DD+    E++L+ VF+           F                    
Sbjct: 248 WMVEPEVAFAELDDVAKLAEDMLKYVFKAVLEERRDDLEFFAQRIDKEAITRLEQFVASD 307

Query: 276 --RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
             ++ Y DAI+       +   P+         + SE   F           V   P   
Sbjct: 308 FAQVDYTDAIQILLDSGREFEFPVEWG----IDMSSEHERFLAEEHFKAPVIVKNYPKDI 363

Query: 334 GGGNRAFCDR-MNEWARSQGQPGLAYIF 360
                   D      A     PG+  I 
Sbjct: 364 KAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 6/99 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+      +GI                +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDARMIEMGIDP----EHMSWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 426 YGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|297566450|ref|YP_003685422.1| asparaginyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296850899|gb|ADH63914.1| asparaginyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 441

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/350 (17%), Positives = 116/350 (33%), Gaps = 15/350 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEI 61
           R     ++   + G  + + GWV   R  G I FL +RD  G  Q            FE 
Sbjct: 2   RRVFIEEISKYE-GQEILIRGWVMGRRSKGKIHFLTLRDGTGFLQATVFKGELPDEEFEQ 60

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  +  E  L + G V + S          G  EL  + ++++S+           +E+ 
Sbjct: 61  ADHLPQEAALEVSGQVKADSR-------APGGYELLVRSLKVVSL--PRKEYPITPKEHG 111

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +R L LR       +  R  +  ++        F+    PILT ++ EG  D  
Sbjct: 112 VDFLMDHRHLYLRHRRPWAVLRIRDELERAIHDFFGERGFVRMDAPILTPNAVEGTTDLF 171

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
               +  G    L Q+ Q Y     A  F + +   P FR E  ++ R   EF+ ++ E+
Sbjct: 172 EVD-LFDGEKAYLSQSGQLY-AEAGAMAFGKVYTFGPTFRAERSKTRRHLLEFWMIEPEV 229

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +F+  ++ +   E ++  +              L             + P +     +  
Sbjct: 230 AFMTHEENMQLQEELVAYLVGRVLEEKKRELEILERDTTVLQTTAQGNYPRIHYTQAVEM 289

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           V +          + +   +           G      F ++     ++ 
Sbjct: 290 VNKIAQERPELELAPMQWGDDFGAPHEAALTGQFDRPIFVEKYPAAVKAF 339



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 41/117 (35%), Gaps = 14/117 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF--EIASGGIRNHMSEVMLQAF 508
           K   A   F M           D   +     DL+      EI  G  R H  E++LQ  
Sbjct: 331 KYPAAVKAFYMEPD------PEDPRLVLNA--DLLAPEGVGEIIGGSQRIHDPELLLQKI 382

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
              G+     E  F         G  PH G   G++R V  + G +++RE   FP  
Sbjct: 383 REHGLP----EEVFDWYMDLRLFGTVPHSGFGIGLERTVRWICGIEHIREAIPFPRM 435


>gi|188992094|ref|YP_001904104.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167733854|emb|CAP52060.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. campestris]
          Length = 464

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 119/385 (30%), Gaps = 54/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D   +   QVVA      F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCLAPIQVVATESLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +++    +  +        E+ A  +EI+   E+        +        +   L  R 
Sbjct: 77  VLVKSQGKGQS-------FEIQASGVEIVGWVEDPLTYPIQPKPMSPEFLREVAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +        R  +  ++        F   STPI+T S  EGA      S ++        
Sbjct: 130 NLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMFRVSTLDMVNLPRTA 189

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q           + +   P FR E+  + R   EF+ ++
Sbjct: 190 QGEVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHLAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNFLRI 277
            E++F +  +     E  L+ +F    +                        ++  F +I
Sbjct: 250 PEIAFADLAEDARLAEQFLKYLFRAVLDERGDDLAFLAERVDKNAISKLEAFINAPFEQI 309

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA++           P+   +   TEH         ++     P             
Sbjct: 310 DYTDAVKLLQNSGKKFDFPVEWGLDLQTEHERW-----LTEEHIGRPVVVTNYPEHIKAF 364

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 365 YMRLNDDGKTVAAMDVLAPGIGEII 389



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 12/152 (7%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKA 479
           ++  +  +F + +++      E E+ +   H                  ++ ND     A
Sbjct: 317 LLQNSGKKFDFPVEWGLDLQTEHERWLTEEHIGRPVVVTNYPEHIKAFYMRLNDDGKTVA 376

Query: 480 FQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              D++  G  EI  G  R    +V+    +  G+ K      +       + G  PH G
Sbjct: 377 -AMDVLAPGIGEIIGGSQREERLDVLDARMAQFGLDK----EHYSWYRDFRRYGSVPHAG 431

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              G +R+V+ + G  N+R+   +P +    +
Sbjct: 432 FGLGFERLVVYVCGLSNIRDAIPYPRAPGSAE 463


>gi|300769986|ref|ZP_07079865.1| asparagine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762462|gb|EFK59279.1| asparagine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 481

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 123/356 (34%), Gaps = 32/356 (8%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           T     L  ++ G  V + GWV   R +    F+ I D   I  + A  D    + A   
Sbjct: 4   TRIKELLNATEFGQEVIVKGWVRTFRNNQ---FIAINDGSSINNIQAVVDFENTDDA--- 57

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                    G  +      I +     ++E+   +++++  ++    P+  ++   E +R
Sbjct: 58  --LLKRITTGAAVRVKGTLIESLGKGQKVEVKVTELDVIGDSDPEKFPLQPKKHSLEFLR 115

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            +   L  R  T +     R  +  ++       +F+   TPI+T S  EGA +    + 
Sbjct: 116 -EIAHLRFRTGTFNAIFKVRNALSFAVHRFFNERDFVYMHTPIITGSDAEGAGEMFRVTT 174

Query: 186 VN--------------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           ++              +  F+          Q +  L A  F   +   P FR E+  + 
Sbjct: 175 LDLNNPPRTENGDIDFKEDFFGKSTNLTVSGQLEGELAALAFGNIYTFGPTFRAENSNTT 234

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           R   EF+ ++ EM+F E +D ++  E +L+ V +           FL+   +  +     
Sbjct: 235 RHLAEFWMIEPEMAFYELEDNMDLAEALLKYVIQYALETCPEEIEFLK---NRLLEEEKN 291

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                R+ +   ++ E         F ++   +    +           +   D  
Sbjct: 292 KPAADRSEM---DLIEKLKFCLENEFERVKYTDAIEILKRSKPNQKKQFKYLIDEW 344



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 20/146 (13%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +  +   + D+P      E K        F M Q   ++L  N + ++    
Sbjct: 352 HERYLVEKHFKKPVILTDYP-----REIKS-------FYMKQNEPDALGRNTVRAMDI-- 397

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     E+  G  R    + +L   + VGI  E +E          + G  PH G   
Sbjct: 398 --LFPGIGEMVGGSQREENLDKLLARMAEVGIPAEEME----WFLDTRRFGSVPHSGFGV 451

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+V+ + G  N+R+V  FP +  
Sbjct: 452 GFERLVLFVTGMTNIRDVIPFPRTPK 477


>gi|163786586|ref|ZP_02181034.1| asparagine--tRNA ligase [Flavobacteriales bacterium ALC-1]
 gi|159878446|gb|EDP72502.1| asparagine--tRNA ligase [Flavobacteriales bacterium ALC-1]
          Length = 477

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/291 (18%), Positives = 111/291 (38%), Gaps = 31/291 (10%)

Query: 6   THSCGDLGVSDVG-SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-- 62
           T S  +L   DV    V + GWV   R +    F+ + D   I  +    D   F+ A  
Sbjct: 3   TKSVAELLSKDVTLQDVTVKGWVRTFRANR---FIALNDGSTINNIQCVVDFENFDEALL 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K + +   + + G ++    +  +       +E+  + +++L  ++    P+  ++   E
Sbjct: 60  KRITTGSAIHVTGELVESQGKGQS-------VEIQVKALDVLGDSDPETYPIQPKKHTFE 112

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +   L  R +T    +  R+ +  ++        F    TPI+T S  EGA +   
Sbjct: 113 FLR-ENAHLRTRTNTFSAVMRLRSSLSFAIHKYFNENGFYYIHTPIVTGSDAEGAGEMFR 171

Query: 183 PSRVN--------------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
            + ++              +  F+          Q +    A    + +   P FR E+ 
Sbjct: 172 VTGLDAKNPPLNDDGSVDYKQDFFGKETNLTVSGQLEAETYAMSLGKVYTFGPAFRAENS 231

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            + R   EF+ ++ E++F++    ++  E+ ++ V       N     FL 
Sbjct: 232 NTTRHLAEFWMVEPEVAFMDLAGNMDLAEDFMKSVLSYALENNKEDLEFLE 282



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 14/118 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
               +   F M           D  +++A   D++  G  E+A G  R    +V+ +   
Sbjct: 369 DYPASIKAFYMR-------LNEDGKTVRAM--DVLFPGIGEMAGGSQREERLDVLKEKMK 419

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + I     E          + G   H G   G++R++M   G  N+R+V  +P +  
Sbjct: 420 ALDIP----EEELWWYLDLRKYGTAVHSGFGLGLERLIMFATGISNIRDVIPYPRTPQ 473


>gi|119945617|ref|YP_943297.1| asparaginyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166231671|sp|A1SW33|SYN_PSYIN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|119864221|gb|ABM03698.1| asparaginyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 466

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 73/405 (18%), Positives = 133/405 (32%), Gaps = 51/405 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           +G+ V + GW+   R    GI FL I D      + A   +A    +  V +       G
Sbjct: 16  IGTEVTVQGWIRTRRDSKAGISFLAIYDGSCFDPIQAVVPAALENYSDEVLN----LTAG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + E + +     Q E+ A ++E+L   ++        + +      ++  L  R 
Sbjct: 72  CSVQVTGELVESPGKGQQFEIQATQVEVLGFVQDPDTYPMSAKRHSIEYMREHAHLRART 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           +        R  + ++M      + F   STPI+T S  EGA +    S ++        
Sbjct: 132 NMFGAVTRVRNCLSHAMHNFFYEKGFNWISTPIITGSDAEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                 +  F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 TGAIDYKKDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSHTTRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F +  D     E++L+ VF                             VS+ F+R+
Sbjct: 252 PEIAFADLADAAQLAEDMLKYVFNAVLTERADDMAFFAQRVDKEAITRLEKIVSSEFVRM 311

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y DAI        +   P+         + SE   +   + V     +   P       
Sbjct: 312 DYTDAIEILQNCGKEFEFPVAWG----VDLQSEHERYLAEVHVGAPVILQNYPKDIKAFY 367

Query: 338 RAFC-DRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNI 381
                D     A     PG+  I   +  S     +  + K  + 
Sbjct: 368 MKLNADGKTVAAMDVLAPGIGEI---IGGSQREEDLVALDKRFDE 409



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 58/156 (37%), Gaps = 30/156 (19%)

Query: 430 NCFEF--CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF------- 480
             FEF   W +D      +E E+ +   H        G   +  N    IKAF       
Sbjct: 325 KEFEFPVAWGVDL----QSEHERYLAEVHV-------GAPVILQNYPKDIKAFYMKLNAD 373

Query: 481 -----QYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
                  D++  G  EI  G  R      + + F  +GI+K      +       + G  
Sbjct: 374 GKTVAAMDVLAPGIGEIIGGSQREEDLVALDKRFDEMGINK----EDYSWYRDLRKYGTV 429

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           PH G   G +R+V  + G +N+R+V  FP +    D
Sbjct: 430 PHAGFGLGFERLVSYVTGVQNIRDVIAFPRAPGSAD 465


>gi|71280476|ref|YP_270737.1| lysyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|123747345|sp|Q47WT5|SYK_COLP3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71146216|gb|AAZ26689.1| lysyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 524

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 79/376 (21%), Positives = 139/376 (36%), Gaps = 50/376 (13%)

Query: 5   RTHSCGDLGVSD--------VGSFVR--LSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H   D+                V   ++G V   R      FL I+D  G  Q  A  
Sbjct: 43  REHLAADIQAEHGEKTKEELEELQVTYAIAGRVMAKRGP----FLVIQDSSGRIQGYAEK 98

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                 + K +R++W     G ++      I      G + ++     +L+ +   PLP 
Sbjct: 99  T-----VQKEIRAKWGSLDIGDIVGIKG--ILHKSGKGDLYVNMDHYSLLTKSLR-PLPE 150

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
                  +  +++ R++DL  +   +N  K R++I+  +R  +   +F+E  TP+L    
Sbjct: 151 KFHGLSDQETKYRQRYIDLIINEDTRNTFKMRSKIVAGIRNFLTQRDFMEVETPMLQIIP 210

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+          Y L  AP+   + L+  GFDR F+I   FR+E   +   P 
Sbjct: 211 GGATAKPFMTHHNTFDLDMY-LRIAPELNLKRLVVGGFDRVFEINRSFRNEGISTRHNP- 268

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------------------GNTVSNN 273
           EF  ++   ++ +  D++NT E +LR + ++                         +   
Sbjct: 269 EFTMIEFYQAYADYHDLMNTTEEMLRTIAQDVLGTTTIRNTVKNSEGEVVEEKFYDLGKP 328

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           F+R+   DAI +YG D    R    +         + F     +       E  A    G
Sbjct: 329 FVRLSMVDAILQYGKDH---RGAEQLDEAALRDPENNFDAIKAMAKAVGVKENSASKVWG 385

Query: 334 GGGNRAFCDRMNEWAR 349
            G  +  C+   E A 
Sbjct: 386 PG--KYICEIFEEVAE 399


>gi|237837009|ref|XP_002367802.1| lysyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211965466|gb|EEB00662.1| lysyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 658

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 20/269 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF------EIAKSV 65
           G       V+++G + RV   G  + F DIR      QV++N            E+    
Sbjct: 177 GEHLENEEVQIAGRISRVSASGQKLRFYDIRGDGEKIQVMSNFSYHDEKAGDFSEVHNRF 236

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           R   V+ I G                G++ +  +++ +LS    +       +++   +R
Sbjct: 237 RRGDVIGIRG---------FPGKSKRGELSIFPREVTLLSPCLHMLPERNSLKDF--EVR 285

Query: 126 FKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           F++R+LDL  +    K  + R+RI+N +R  +    F+E  TP++   +   A       
Sbjct: 286 FRHRYLDLMVNDETRKTFLIRSRIVNYLRRFLEDRGFVEVETPMMNVIAGGAAARPFKTH 345

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             +      +  AP+ + ++L+  G DR F+I   FR+E       P EF   +   ++ 
Sbjct: 346 HNDLDMDLYMRIAPELFLKMLIVGGMDRVFEIGKNFRNEGIDMTHNP-EFTACEFYWAYA 404

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           + +D++N  E ++  +         +  +
Sbjct: 405 DYNDLMNFTEELVSSMVMALHGTYQIQFH 433



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 50/134 (37%), Gaps = 10/134 (7%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
            K +    +P  M           +L      +++L   G E+ +     +      + F
Sbjct: 515 TKPVFITEHPQIMSPLAKWHRSKPEL----TERFELFLMGKELCNAYTELNDPVRQRECF 570

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +   +K   ++           A + G+PP GG   GIDR+ M L     ++EV LFP 
Sbjct: 571 MDQAKAKAAGDDEATCIDEVFCTALEYGLPPTGGWGIGIDRLTMFLSDHNTIKEVILFPA 630

Query: 565 SQNFCDLLMGSPST 578
            +     L+G P  
Sbjct: 631 MRPQ--PLVGIPGK 642


>gi|153938666|ref|YP_001390367.1| aspartyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|152934562|gb|ABS40060.1| aspartate--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295318454|gb|ADF98831.1| aspartate--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 429

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 15/255 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +   V L GW+H++R    I FL IRD  G+ Q + + D         V+ E ++ I G+
Sbjct: 13  INENVNLQGWIHKIRKLKNITFLIIRDRSGLIQCIVDNDKL---DLSQVKIESIVSITGV 69

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYPESIRFKYRFLDLR 134
           V   +             E+  + +EI++ A +       +   E         R L LR
Sbjct: 70  VKESTNALNP-------FEIQVENLEIINAALDKVPIEINKENLEINLDTMLNNRILSLR 122

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
              ++     +  I+N  R  +  E F E  TP +     EG  +          ++ A 
Sbjct: 123 HPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFENTAYLA- 181

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTM 253
            Q+PQ YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+E+ F+E + DI+   
Sbjct: 182 -QSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDEKDIMEVE 240

Query: 254 ENVLRGVFEEFSNGN 268
           E +L+ + E+ +   
Sbjct: 241 ERLLKFILEKLNKEC 255



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 80/213 (37%), Gaps = 16/213 (7%)

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  DE   +     + K +     +  +   D+ D +     +  P      A D   
Sbjct: 227 IGFIEDEKDIMEVEERLLKFILEKLNKECKEYFDLLDSELPKIESEIPKITFKEALDILI 286

Query: 419 HIAQELGI---INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
               +  +   ++    +          ++ +E+   DF     T        +    L 
Sbjct: 287 KEYNKNNLTCDLDPEGEKLI-------CKYAKEKLDSDFIFL--TNYPREKRPMYTMPLG 337

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
                 +DL+  G EI +GG R H   +++      G + +  E+       AF+ GMP 
Sbjct: 338 KDGTHSFDLLFRGIEITTGGQRIHDYNMLVDNMEFKGFNPKDYES----YLSAFKYGMPK 393

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           HGG+A G++R+   LLG +NVRE +L    +  
Sbjct: 394 HGGLAIGLERLTSRLLGLENVREAALITRDRTR 426


>gi|328955952|ref|YP_004373285.1| asparaginyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456276|gb|AEB07470.1| asparaginyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 467

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 52/295 (17%), Positives = 99/295 (33%), Gaps = 29/295 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M+R +         S  G  V ++GWV  +R      F+ I D      +    +    +
Sbjct: 1   MNRTKIARIYTDAESLGGELVTVAGWVRSIRDMKNFGFITINDGSSFRDLQIVMNRDQLD 60

Query: 61  IAKSVRSEWV---LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
               +  + V   L   G+V                 EL+A+ I +   +         +
Sbjct: 61  NYDEIAHQNVSAALVATGVVKLTPD-------APQPFELTAETIRVEGASAPDYPLQ--K 111

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           +          + L  R +        R+    ++        F+  +TPI+TA+  EGA
Sbjct: 112 KRATVEYLRTQQHLRPRTNLFRAVFRIRSVTAAAIHRFFQERGFVYVNTPIITANDAEGA 171

Query: 178 RDFLVPSRVNQG--------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCF 220
            +    + ++                 F+ +P +     Q      A  F   +   P F
Sbjct: 172 GEMFHVTTIDPMNPPLSPNGEIDWSKDFFGVPASLTVSGQLNAENFAMAFGDVYTFGPTF 231

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R E+  + R   EF+ ++ EM+F +  D ++  E +L+ +  E           L
Sbjct: 232 RAENSNTARHAAEFWMVEPEMAFADLADDMDLAEQMLKFLISEVQRLCPDELAML 286



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 48/144 (33%), Gaps = 24/144 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +     ++ D+P                 F M          ND     A  
Sbjct: 342 HERYLTERHFKRPTFVSDYP------------AQIKAFYMRM--------NDDGKTVAAM 381

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    + + +  +++G+       ++       + G   H G   
Sbjct: 382 DCLVPGIGEIIGGSQREERLDRLERRIADLGMDA----EQYRPYLDLRRYGTNRHAGFGL 437

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +R+VM L G  N+R+V   P +
Sbjct: 438 GFERMVMYLTGVSNIRDVLPHPRT 461


>gi|126662967|ref|ZP_01733965.1| asparagine--tRNA ligase [Flavobacteria bacterium BAL38]
 gi|126624625|gb|EAZ95315.1| asparagine--tRNA ligase [Flavobacteria bacterium BAL38]
          Length = 481

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/290 (18%), Positives = 111/290 (38%), Gaps = 30/290 (10%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAK 63
           +     L  + +   V   GWV   R +    F+ + D   I   Q V + ++   E  K
Sbjct: 4   SKIIDLLNSTKIVHEVTTKGWVRTFRNNQ---FIALNDGSTIHNIQCVVDFENTPEETLK 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            + +   +C+ G +        N       +E+   K+E+L  ++    P+  ++   E 
Sbjct: 61  RITTGAAICVTGTLAESRGAGQN-------VEIQVTKLEVLGDSDAEKFPMQPKKHSLEF 113

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +   L +R +T    +  R+ +  ++      + F+  +TPI+T S  EGA +    
Sbjct: 114 LR-ENAHLRVRTNTFGAIMRVRSVLSFAVHQYFQEKGFVYVNTPIITGSDAEGAGEMFKV 172

Query: 184 SRV--------------NQGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           + +               +  F+          Q +    A    + +   P FR E+  
Sbjct: 173 TALPFDGTPRTEEGKVNFKEDFFGKETNLTVSGQLEAETYAMALGQVYTFGPTFRAENSN 232

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           + R   EF+ ++ E++F +  D ++  E+ ++ V +           FL 
Sbjct: 233 TSRHLAEFWMIEPEVAFNDLADNMDLAEDFIKYVIKYAVEKCGDDLKFLE 282



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 10/117 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M           +         D++  G  EI  G  R    +V+++   
Sbjct: 369 DYPAKIKAFYMRLND-----NTEPGKETVRAMDILFPGIGEIVGGSQREERYDVLVEKMK 423

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +GI     E          + G   H G   G +R+V+ + G  N+R+V  FP + 
Sbjct: 424 ALGID----EEELWWYLDTRRFGSAVHSGFGLGFERLVLFVTGMTNIRDVIPFPRTP 476


>gi|27365578|ref|NP_761106.1| asparaginyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|37680274|ref|NP_934883.1| asparaginyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|320155974|ref|YP_004188353.1| asparaginyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|31340441|sp|Q8DAF0|SYN_VIBVU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|59798575|sp|Q7MJS0|SYN_VIBVY RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|27361726|gb|AAO10633.1| asparaginyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|37199021|dbj|BAC94854.1| asparaginyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|319931286|gb|ADV86150.1| asparaginyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 466

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/369 (17%), Positives = 123/369 (33%), Gaps = 51/369 (13%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +   E +    G
Sbjct: 16  VDSEVTVRGWIRTRRDSKAGISFLAIYDGSCFDPIQAVVPNN----LNNYNDEVLKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGKIVASPAAGQAFELAATDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++        
Sbjct: 132 NVIGAVARVRHSLSQAIHRFYHEQGYYWLSAPLITASDCEGAGEMFRVSTLDLANLPRTE 191

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 SGDVDFNEDFFGKETFLTVSGQLNGEAYACALSKIYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + +DI    E++L+ VF                             VS++F ++
Sbjct: 252 PEVAFADLNDIAKLAEDMLKYVFAAVLEERRDDLEFFASRIDKDVINRLEQFVSSDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y DAI+       +   P+            +     +       ++   I        
Sbjct: 312 DYTDAIQILLDSGREFEFPVEW--------GIDMSSEHERFLAEEHFKAPVIVKNYPKDI 363

Query: 338 RAFCDRMNE 346
           +AF  RMNE
Sbjct: 364 KAFYMRMNE 372



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 14/111 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M           D  ++ A   D++  G  EI  G  R    +V+      +GI   
Sbjct: 365 AFYMRMNE-------DGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMVEMGIDP- 414

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                        + G  PH G   G +R+V  + G  NVR+V  FP +  
Sbjct: 415 ---EHMNWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPR 462


>gi|260060698|ref|YP_003193778.1| asparaginyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88784828|gb|EAR15997.1| asparaginyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 475

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 56/292 (19%), Positives = 107/292 (36%), Gaps = 30/292 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R R+     L  + + S V +SGWV   R +    F+ + D   +  +    D   F+
Sbjct: 1   MTRIRSI----LSEAPLLSEVSVSGWVRTFRSNR---FIALNDGSTLENLQCVVDFENFD 53

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A   R        G  ++     + +     ++E+   ++EI   A+    P+  ++  
Sbjct: 54  EATLRRIN-----TGAALTVRGTLVESQGRGQKVEVQVSQLEIHGDADPESYPIQPKKHS 108

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +   L +R +T    +  R+ +   +        F     PI+T S  EGA + 
Sbjct: 109 MEFLR-EQAHLRIRTNTFAAVMRVRSALAFGVHEYFTRNGFYYFHAPIITGSDAEGAGEM 167

Query: 181 LVPSRVNQ--------------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
              S ++                 F+          Q +    A    + +   P FR E
Sbjct: 168 FRVSTLDPLTPPRDESGNVDFGEDFFGKETNLTVSGQLEAEAYAMALGKVYTFGPTFRAE 227

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +  + R   EF+ ++ EM+F + D  ++  E+ ++ V             FL
Sbjct: 228 NSNTSRHLAEFWMIEPEMAFYDLDANMDLAEDFIQEVIRYVLKHCEEDLAFL 279



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 14/117 (11%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSN 510
                  F M          +D  +++A   D++  G  EI  G  R    +V+ +    
Sbjct: 368 YPAEIKAFYMR-------LNDDGKTVRAM--DILFPGIGEIVGGSQREERLDVLQEKMQQ 418

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +GI ++ +           + G   H G   G +R+V    G  N+R+V  FP +  
Sbjct: 419 LGIDEKELW----WYLDLRRFGTAVHSGFGLGFERLVQFATGMGNIRDVIPFPRTPQ 471


>gi|325928164|ref|ZP_08189373.1| asparaginyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325541460|gb|EGD12993.1| asparaginyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 464

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 119/385 (30%), Gaps = 54/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D       QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +++    +  +        E+ A  +EI+   E+        +        +   L  R 
Sbjct: 77  VLVKSQGKGQS-------FEIQASGVEIVGWVEDPLTYPIQPKPMTPEFLREVAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +        R  +  ++        F   STPI+T S  EGA      S ++        
Sbjct: 130 NLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMFRVSTLDMVNLPRDA 189

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q           + +   P FR E+  + R   EF+ ++
Sbjct: 190 SGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHLAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNFLRI 277
            E++F +  +     E  L+ +F    +                        ++  F +I
Sbjct: 250 PEIAFADLAEDARLAEQFLKYLFRAVLDERGDDLAFLAERVDKNAIAKLEAFINAPFEQI 309

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA++           P+   +   TEH         ++     P             
Sbjct: 310 DYTDAVKLLQNSGKKFDFPVEWGLDLQTEHERW-----LTEEHIGRPVVVTNYPEHIKAF 364

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 365 YMRLNDDGKTVAAMDVLAPGIGEII 389



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 12/152 (7%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKA 479
           ++  +  +F + +++      E E+ +   H                  ++ ND     A
Sbjct: 317 LLQNSGKKFDFPVEWGLDLQTEHERWLTEEHIGRPVVVTNYPEHIKAFYMRLNDDGKTVA 376

Query: 480 FQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              D++  G  EI  G  R    +V+    +  G+ K      +       + G  PH G
Sbjct: 377 -AMDVLAPGIGEIIGGSQREERLDVLDARMAQFGLDK----EHYSWYRDFRRYGSVPHAG 431

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              G +R+V+ + G  N+R+   +P +    +
Sbjct: 432 FGLGFERLVVYVCGLSNIRDAIPYPRAPGSAE 463


>gi|324507490|gb|ADY43176.1| Lysyl-tRNA synthetase [Ascaris suum]
          Length = 578

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 84/576 (14%), Positives = 180/576 (31%), Gaps = 122/576 (21%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPD-----SACFEIAKSVRSEWVLCI 73
            V ++G +   R  G  +IF D+       Q++AN        A  ++ + ++   ++ +
Sbjct: 110 TVNVAGRIFSKRESGGKLIFYDLHGEGTRVQILANARFHKGREAFGDVHERIKRGDIIGV 169

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G           A   +G++ +   ++  L+      LP        +  R++ R+LDL
Sbjct: 170 RG---------HPAKSKSGELSVIPIEVVQLTPCL-HMLPHTHFGLKNQETRYRMRYLDL 219

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSF 191
             +   K+  V R ++I  +R  +    F+E  TP++   +    A+ F+          
Sbjct: 220 IMNPSVKDKFVIRAKMITFLRRYLDNLGFLEVETPMMNQIAGGATAKPFITHHNELDMDL 279

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + L  AP+ Y ++L+  G DR +++                                   
Sbjct: 280 F-LRVAPELYHKMLVVGGIDRVYEVGRL-------------------------------- 306

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
                       F N      +       +    Y              +  +    +E 
Sbjct: 307 ------------FRNEGIDQTHNPEFTTCEFYMAYA-------------DYEDLIKLTED 341

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
            +   + +++  Y++   P   G       D    + R     GL            +  
Sbjct: 342 LLSKMVFAIHGTYKIQYHPNGAGTEPVYDIDFTPPFKRVNMYEGL---------EKALGM 392

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
             P    L+     A+  ++ ++ G         P             + + L     + 
Sbjct: 393 KLPTPDTLDTAEANAVIDKIALERG----VECPPPRTTARLLDKL---VGEYL---ESDF 442

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
               +++  P         +I    + +     G+              +++L     EI
Sbjct: 443 ISPTFLVGHP---------QIMSPLSKWHRSIPGL------------TERFELFVVTKEI 481

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIV 547
            +     +      Q F      K+  ++           A + G+PP  G   GIDR+ 
Sbjct: 482 VNAYTELNDPLAQRQRFEQQAKDKQAGDDEAQLIDENFCTALEYGLPPTAGWGMGIDRLT 541

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQ 583
           M+   + N++EV  FP  +     +   P+ V  ++
Sbjct: 542 MVFTDSNNIKEVLFFPAMRPEEQKV--GPAPVDEDE 575


>gi|260768310|ref|ZP_05877244.1| asparaginyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260616340|gb|EEX41525.1| asparaginyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 466

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/384 (17%), Positives = 121/384 (31%), Gaps = 48/384 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNN----LNNYDNEVLKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPASGQAFELAATDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++        
Sbjct: 132 NVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 191

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 AGKVDYNEDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            E++F E DD+    E++L+ VF+           F                      ++
Sbjct: 252 PEVAFAELDDVAKLAEDMLKYVFKAVLEERRDDLEFFAQRIDKEAITRLEQFVASDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y DAI+       +   P+         + SE   F           V   P       
Sbjct: 312 DYTDAIQILLDSGREFEFPVEWG----IDMSSEHERFLAEEHFKAPVIVKNYPKDIKAFY 367

Query: 338 RAFCDR-MNEWARSQGQPGLAYIF 360
               D      A     PG+  I 
Sbjct: 368 MRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 6/99 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+      +GI                +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDARMIEMGIDP----EHMSWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 426 YGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|91083579|ref|XP_968212.1| PREDICTED: similar to lysyl-tRNA synthetase [Tribolium castaneum]
 gi|270007824|gb|EFA04272.1| hypothetical protein TcasGA2_TC014562 [Tribolium castaneum]
          Length = 571

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 13/267 (4%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           G++   D    + ++G VH +R  G  +IF D+R      QV+A   +   E AK     
Sbjct: 99  GEVVEKD---KLSVAGRVHAIRESGAKLIFYDLRGEGTKLQVMATARNYGDE-AKFAEDT 154

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             +    ++     E +      G++ +   KI++LS      LP        +  RF+ 
Sbjct: 155 GKIRRGDII---GVEGVPTKTKKGELSVMPTKIKLLSPCL-HMLPHLHYGLKDKETRFRQ 210

Query: 129 RFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186
           R+LDL  +  + +    R +II+  R       F+E  TP++   +    A+ F+     
Sbjct: 211 RYLDLILNSRVREIFEIRAKIISYTRRFFDELGFLEVETPMMNMIAGGATAKPFITHHNE 270

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                + +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + 
Sbjct: 271 LNMDLF-MRVAPELYLKMLVVGGLDRVYEIGRLFRNEGIDLTHNP-EFTSCEFYMAYADY 328

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNN 273
            D++   E ++ G+ +       +  +
Sbjct: 329 HDLIAITEALISGMVKSIHGSYKIKYH 355



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 4/95 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++L     EI +     +   V  Q F      K   ++           A + 
Sbjct: 461 PGLTERFELFVMKKEICNAYTELNDPMVQRQRFEEQAKDKAAGDDEAQLIDENFCTALEY 520

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP GG   GIDR+ M L    N++EV LFP  +
Sbjct: 521 GLPPTGGWGMGIDRLTMFLTDNNNIKEVLLFPAMK 555


>gi|117606291|ref|NP_001071079.1| aspartyl-tRNA synthetase, cytoplasmic [Danio rerio]
 gi|117167927|gb|AAI24801.1| Zgc:154056 [Danio rerio]
          Length = 531

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 81/379 (21%), Positives = 144/379 (37%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDI-RDHYGITQVVANPD---SACFEIAKSVR 66
           DL +      + +   +H  R  G   FL +    + +  ++A  D       + A ++ 
Sbjct: 80  DLTLEKAEQQIWVRARIHTSRAKGKQCFLVLRHQQFTVQALLAVGDRASKQMVKFAANIT 139

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-------------ELPLP 113
            E ++ ++ +V     E    +     +EL  ++I ++S +E             E    
Sbjct: 140 KESIIDVEAVVKKV--EQKIESCSQQDVELHVERIFVISQSEARLPLQLEDAVRPEGEGD 197

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             G     +  R   R +DLR  T       ++ +    R  +I + F+E  TP + +++
Sbjct: 198 EEGRATVNQDTRLDNRVIDLRTTTSQAIFRLQSGVCQLFRDTLINKGFVEIQTPKIISAA 257

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + FD+ F + P FR ED  + R   E
Sbjct: 258 SEGGANVFTVSYFKTSAYLA--QSPQLYKQMCICADFDKVFCVGPVFRAEDSNTHRHLTE 315

Query: 234 FYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNFLR------ 276
           F  LD+EM+F        D I +TM  + +G+ + F       N    S  F        
Sbjct: 316 FVGLDIEMAFSYHYHEVIDSITDTMVQIFKGLRDRFQTEIQTVNKQYPSEPFKFLEPTLR 375

Query: 277 ------ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
                 +    A      D+ DL  P    +  + +    ++F V  K  L+V P Y + 
Sbjct: 376 LEYKEGLAMLRAAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFYTMP 435

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 436 DPNNPKYSNSYDMFMRGEE 454



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF            N+     +  YD+   G EI SG  R H ++++ +   +
Sbjct: 423 KYPLAVRPFYTMPD------PNNPK--YSNSYDMFMRGEEILSGAQRIHDAQLLTERAMH 474

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP       
Sbjct: 475 HNIDL----EKIKAYIDSFRYGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRDPKRLT 530

Query: 571 L 571
            
Sbjct: 531 P 531


>gi|325917964|ref|ZP_08180133.1| asparaginyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325535821|gb|EGD07648.1| asparaginyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 464

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 119/385 (30%), Gaps = 54/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D       QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +++    +  +        E+ A  +EI+   E+        +        +   L  R 
Sbjct: 77  VLVKSQGKGQS-------FEIQASGVEIVGWVEDPLTYPIQPKPMTPEFLREVAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +        R  +  ++        F   STPI+T S  EGA      S ++        
Sbjct: 130 NLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMFRVSTLDMVNLPRDA 189

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q           + +   P FR E+  + R   EF+ ++
Sbjct: 190 TGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHLAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNFLRI 277
            E++F +  +     E  L+ +F    +                        ++  F +I
Sbjct: 250 PEIAFADLAEDARLAEQFLKYLFRAVLDERGDDLAFVAERVDKNAISKLDAFINAPFEQI 309

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y +A++           P+   +   TEH         ++     P             
Sbjct: 310 DYTEAVKLLQNSGKKFDFPVEWGLDLQTEHERW-----LTEEHIGRPVVVTNYPEHIKAF 364

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 365 YMRLNDDGKTVAAMDVLAPGIGEII 389



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 79/247 (31%), Gaps = 40/247 (16%)

Query: 327 WAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPV-AKHLNIVNTE 385
           +A  A+       F   +      +    LA++  R+D++        + A    I  TE
Sbjct: 254 FADLAEDARLAEQFLKYLFRAVLDERGDDLAFVAERVDKNAISKLDAFINAPFEQIDYTE 313

Query: 386 AIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEW 445
           A+++  +           G                  E  +   +      + ++P    
Sbjct: 314 AVKLLQNSGKKFDFPVEWG-----------LDLQTEHERWLTEEHIGRPVVVTNYP---- 358

Query: 446 NEEEKKIDFAH-NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEV 503
                     H   F M          +D  ++ A   D++  G  EI  G  R    +V
Sbjct: 359 ---------EHIKAFYMR-------LNDDGKTVAAM--DVLAPGIGEIIGGSQREERLDV 400

Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +    +  G+ K      +       + G  PH G   G +R+V+ + G  N+R+   +P
Sbjct: 401 LDARMAQFGLDK----EHYSWYRDFRRYGSVPHAGFGLGFERLVVYVCGLSNIRDAIPYP 456

Query: 564 MSQNFCD 570
            +    +
Sbjct: 457 RAPGSAE 463


>gi|312143648|ref|YP_003995094.1| asparaginyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904299|gb|ADQ14740.1| asparaginyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 463

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/369 (17%), Positives = 132/369 (35%), Gaps = 51/369 (13%)

Query: 1   MHRYRTHSCGDLGVSDVG--SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           M+ ++     D+   ++     V + GWV   R    I F++I D   +  +     +  
Sbjct: 1   MNYFQRKKIKDILADNIDSYKDVIVMGWVRTKRVSKNIAFIEINDGSCLNNLQIVILNPS 60

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
                 +     + + G +                +E+ A+KI+I+  A E  +    ++
Sbjct: 61  EFPLDDINRGASIKVTGYIDKVEGRE-------QDLEMKAEKIDIIGEAPEDFILQ--KK 111

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
            +      +   L  R +T       R+++  ++      ++F    TPI+T+   EGA 
Sbjct: 112 RHSFEFLREIAHLRARTNTFGVVNRFRSKMSYAVHDYFYNKDFKYIHTPIITSGDAEGAG 171

Query: 179 DFLVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFR 221
           +    + ++                 F+          Q +  LMAS     +   P FR
Sbjct: 172 EIFKVTTLDFEKLAKAENGEIDYSQDFFGKETGLTVSGQLEAELMASALGDVYTFGPTFR 231

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE----------EFSNG---- 267
            E   + R   EF+ ++ EM+F   D+++  +E+ ++ +F           +F N     
Sbjct: 232 AEKSNTSRHASEFWMIEPEMAFCNLDEMMVLIEDFIKKLFTFALNEAAEEMDFFNKQIDK 291

Query: 268 -------NTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKIL 318
                  N +  +F +I Y +AI        D   P+   +   +EH      + F K +
Sbjct: 292 GRREIIANIIEADFAKITYTEAIDILEKSGVDFEYPVSWGIDLQSEHERFLTEKFFKKPI 351

Query: 319 SVNPGYEVW 327
            V    +  
Sbjct: 352 MVKDYPKDI 360



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 4/98 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    LV    EI  G  R    E +      + +  +  +         
Sbjct: 365 MRQNDDNKTVAAVDCLVPGVGEIIGGSQREERYEKLKSRMQELKMDLDEYQ----WFLEI 420

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + G  PH G   G +R++M L G +N+R++  FP + 
Sbjct: 421 RKYGTVPHSGFGLGFERLLMYLSGMQNIRDIIPFPRTP 458


>gi|229525887|ref|ZP_04415292.1| asparaginyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229339468|gb|EEO04485.1| asparaginyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 466

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 123/385 (31%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 16  VDSEVTVRGWIRTRRDSKAGISFLAIYDGSCFNPIQAVVPNN----LNNYDNEVLKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPASGQAFELAASDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++  +     
Sbjct: 132 NVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTD 191

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                Y Q                    A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 AGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + + +    E++L+ VF+                            V ++F  +
Sbjct: 252 PEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVIARLEQFVDSDFAHV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI            P+   +   +EH        F   + V    +          
Sbjct: 312 DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHFKAPVIVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRMNEDGKTVAAMDVLAPGIGEII 391



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 14/113 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M           D  ++ A   D++  G  EI  G  R    +++       GI   
Sbjct: 365 AFYMRMNE-------DGKTVAAM--DVLAPGIGEIIGGSQREERLDILDARMREFGIDP- 414

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                        + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 415 ---EHMDWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|195115232|ref|XP_002002168.1| GI17232 [Drosophila mojavensis]
 gi|193912743|gb|EDW11610.1| GI17232 [Drosophila mojavensis]
          Length = 558

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/351 (19%), Positives = 130/351 (37%), Gaps = 23/351 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           + G     + V++ GWVHR+R  G  +IF+ +RD  G  Q V N        A  + +E 
Sbjct: 128 EKGADYRNARVKIYGWVHRLRRQGKSLIFITLRDGSGFLQCVLNDLLCQTYEALVLSTES 187

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G +              G  EL     E++ +A           E    ++   R
Sbjct: 188 TVVLYGTLKVVPEG----KTAPGGHELIVDYWELIGLAPPGGADAILNEEAHPDVQLDNR 243

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            + +R +   K +  R+ ++ + R   +   + E + P L  +  EG           + 
Sbjct: 244 HIMIRGENTSKVLKMRSVVMQAFRAHYLDRGYNEVTPPTLVQTQVEGGSTLFKMQYFGEE 303

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  +D+
Sbjct: 304 AY--LTQSSQLYLETCLP-ALGDVFTIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFEDL 360

Query: 250 LNTMENVLRGVFEEFSNGNT-------------VSNNFLRICYDDAIRRYGTDKPDLRNP 296
           L+ +E+++  V +                     +  F R+ Y DAI+    +     + 
Sbjct: 361 LDRIEDLICDVVDRILKSPWGYIVKELNPDFKPPTKPFKRMEYVDAIKWLKENNVPKEDG 420

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
              +   E    +  R  +  ++       +    K    +R   D R+ E
Sbjct: 421 -TFYEFGEDIPEAPERKMTDTINEPILLIRFPAEIKSFYMSRCQDDQRLTE 470



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R   ++ +L+A++ 
Sbjct: 449 RFPAEIKSFYMSRCQDDQRLTESVDV-------LLPNVGEIVGGSMRIFDNDEILKAYAR 501

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI        +         G  PHGG   G++R +  LL   ++R+V L+P 
Sbjct: 502 EGIDPAP----YYWYTDQRVYGTMPHGGYGLGLERFLCWLLNRYHIRDVCLYPR 551


>gi|119505212|ref|ZP_01627287.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase [marine
           gamma proteobacterium HTCC2080]
 gi|119458903|gb|EAW40003.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase [marine
           gamma proteobacterium HTCC2080]
          Length = 503

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/293 (21%), Positives = 114/293 (38%), Gaps = 32/293 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRS 67
           DL          ++G + R R      FL I+D     Q+  N    D+   E  K+   
Sbjct: 63  DLEEKH--EVFAVAGRLIRNRG----AFLLIQDGTSTIQLYINRKVLDATTLEAIKTWDL 116

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             ++   G +              G + ++ +   +L+ A   PLP        + +R++
Sbjct: 117 GDIVAASGPINRSGK---------GDLYINMESARLLTKALR-PLPDKYHGLSDQEMRYR 166

Query: 128 YRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R++DL  +         R+  ++ +R  +    F+E  TP+L        A+ F     
Sbjct: 167 QRYVDLIVNPDSRAVFRMRSAAVSFIRRFLDDRGFMEVETPMLHPIPGGAAAKPFETHHN 226

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ Y + L   GF++ ++I   FR+E   +   P EF  L+   ++ +
Sbjct: 227 ALDMPMY-LRIAPELYLKRLTVGGFEKVYEINRNFRNEGLSTRHNP-EFTMLEFYWAYAD 284

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTD 289
            +D ++  E +LR + +      TV            F R+   DAI +Y  D
Sbjct: 285 YNDAMDLTEALLRELTQNLLGTMTVPYGELQLDFSQPFARLSVLDAIYKYNPD 337



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 5/128 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E    E +++        P       + ND       +++    G EIA+G    +  E
Sbjct: 374 FE-ATAEHRLEQPTFITAYPTEVSPLARRNDDNPFITDRFEFFVGGREIANGFSELNDPE 432

Query: 503 VMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F      K+  +           RA + GMPP  G   GIDR+VMLL  A ++R+
Sbjct: 433 DQAERFRAQAAEKDSGDEEAMHFDHDYVRALEYGMPPTAGEGIGIDRLVMLLTDAASIRD 492

Query: 559 VSLFPMSQ 566
           V LFP  +
Sbjct: 493 VLLFPHMR 500


>gi|78047215|ref|YP_363390.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|123771404|sp|Q3BV23|SYN_XANC5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|78035645|emb|CAJ23336.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 464

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 119/385 (30%), Gaps = 54/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D       QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +++    +  +        E+ A  +EI+   E+        +        +   L  R 
Sbjct: 77  VLVKSQGKGQS-------FEIQASGVEIVGWVEDPLTYPIQPKPMTPEFLREVAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +        R  +  ++        F   STPI+T S  EGA      S ++        
Sbjct: 130 NLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMFRVSTLDMVNLPRDA 189

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q           + +   P FR E+  + R   EF+ ++
Sbjct: 190 SGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHLAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNFLRI 277
            E++F +  +     E  L+ +F    +                        ++  F +I
Sbjct: 250 PEIAFADLAEDARLAEQFLKYLFRAVLDERGDDLAFLAERVDKNAITKLEAFINAPFEQI 309

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y +A++           P+   +   TEH         ++     P             
Sbjct: 310 DYTEAVKLLQNSGKKFDFPVEWGLDLQTEHERW-----LTEEHIGRPVVVTNYPEHIKAF 364

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 365 YMRLNDDGKTVAAMDVLAPGIGEII 389



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 12/152 (7%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKA 479
           ++  +  +F + +++      E E+ +   H                  ++ ND     A
Sbjct: 317 LLQNSGKKFDFPVEWGLDLQTEHERWLTEEHIGRPVVVTNYPEHIKAFYMRLNDDGKTVA 376

Query: 480 FQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              D++  G  EI  G  R    +V+    +  G+ K      +       + G  PH G
Sbjct: 377 -AMDVLAPGIGEIIGGSQREERLDVLDARMAQFGLDK----EHYSWYRDFRRYGSVPHAG 431

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              G +R+V+ + G  N+R+   +P +    +
Sbjct: 432 FGLGFERLVVYVCGLSNIRDAIPYPRAPGSAE 463


>gi|307718187|ref|YP_003873719.1| asparaginyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306531912|gb|ADN01446.1| asparaginyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 457

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 55/339 (16%), Positives = 110/339 (32%), Gaps = 39/339 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  + + GW+  VR    + FL + D      +    D+   ++A  ++        G  
Sbjct: 18  GQRLEVYGWIRSVRESKQVAFLHLSDGSTTAPLQVVVDTQRPDLASVLKE----LRTGAA 73

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +        +      +E+ A+ + +L  A     P+  +R   E +R +   L  R +T
Sbjct: 74  VKVEGTLRPSPGTKQPVEVHAEALTVLGPA-PEDYPLQKKRHSFEFLR-EIAHLRPRTNT 131

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY----- 192
           +   +  R  +   +        F+   TPI+T    EGA      + +   + Y     
Sbjct: 132 IGAVMRVRNTLAWEIHRFFQERGFLYVHTPIITTGDAEGAGALFRVTTLPPDAPYDPTED 191

Query: 193 -----ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
                A      Q +    A  F   +   P FR E+  + R   EF+ ++ EM+F + +
Sbjct: 192 FFGAPAFLTVSGQLEAEAYALAFVNVYTFGPTFRAENSHTPRHLAEFWMVEPEMAFCDLE 251

Query: 248 DILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRICYDDAIRRY 286
             ++  +  +  + +     +                          F  + Y +A+   
Sbjct: 252 GDMHLAQEFITHLLKAVLERHPEEMAFFEQWIAPGITDQLEAVVNTPFTHMTYTEAVEHL 311

Query: 287 GTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
                    P    M   TEH  +    +    + V   
Sbjct: 312 RKAPVSFTFPPEWGMDLQTEHERYLTEELVKGPVIVTDY 350



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 4/83 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    E +L     +G+  E  +          + G  PH G   G 
Sbjct: 374 LVPRLGEIIGGSQREDDYERLLARMQELGMRIEAYQ----WYLDLRRYGGAPHAGFGLGF 429

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR+V  + G +N+R+V  FP + 
Sbjct: 430 DRLVQYVSGMQNIRDVIPFPRTP 452


>gi|289663133|ref|ZP_06484714.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 464

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 118/385 (30%), Gaps = 54/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D       QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEVKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +++    +  +        E+ A  +EI+   E+        +        +   L  R 
Sbjct: 77  VLVKSQGKGQS-------FEIQASGVEIVGWVEDPLTYPIQPKPMSPEFLREVAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +        R  +  ++        F   STPI+T S  EGA      S ++        
Sbjct: 130 NLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMFRVSTLDMVNLPRDG 189

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q           + +   P FR E+  + R   EF+ ++
Sbjct: 190 SGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHLAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNFLRI 277
            E++F +  +     E  L+ +F                             ++  F +I
Sbjct: 250 PEIAFADLAEDARLAEQFLKYLFRAVLEERGDDLAFLAERVDKNAIAKLEAFINAPFEQI 309

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA++           P+   +   TEH         ++     P             
Sbjct: 310 DYTDAVKLLQNSGKKFDFPVEWGLDLQTEHERW-----LTEEHIGRPVVVTNYPEHIKAF 364

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 365 YMRLNDDGKTVAAMDVLAPGIGEII 389



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 12/152 (7%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKA 479
           ++  +  +F + +++      E E+ +   H                  ++ ND     A
Sbjct: 317 LLQNSGKKFDFPVEWGLDLQTEHERWLTEEHIGRPVVVTNYPEHIKAFYMRLNDDGKTVA 376

Query: 480 FQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              D++  G  EI  G  R    +V+    +  G+ K      +       + G  PH G
Sbjct: 377 -AMDVLAPGIGEIIGGSQREERLDVLDARMAQFGLDK----EHYSWYRDFRRYGSVPHAG 431

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              G +R+V+ + G  N+R+   +P +    +
Sbjct: 432 FGLGFERLVVYVCGLSNIRDAIPYPRAPGSAE 463


>gi|209155108|gb|ACI33786.1| Aspartyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 531

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 81/378 (21%), Positives = 142/378 (37%), Gaps = 47/378 (12%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVRS 67
           L        + +   +H  R  G   FL +R        +  V         + A ++  
Sbjct: 81  LTPEKADQLIWVRARIHTSRAKGKQCFLVLRQQQFNVQALVAVGERASKQMVKFAANINK 140

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-------------PV 114
           E ++ ++ +V  R  E    +     +EL  ++I ++S AE                   
Sbjct: 141 ESIVDVEAMV--RKVEQKIESCSQQDVELHIERIFVISQAEPRLPLQLEDCVRPEGEGDE 198

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
            G     +  R   R +DLR  T H     ++ +    R  +  + F+E  TP + +++ 
Sbjct: 199 DGRATVNQDTRLDNRVIDLRTTTSHAIFRLQSGVCQLFRDTLTNKGFVEIQTPKIISAAS 258

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EG  +    S     ++ A  Q+PQ YKQ+ + + FD+ F + P FR ED  + R   EF
Sbjct: 259 EGGANVFTVSYFKTSAYLA--QSPQLYKQMCICADFDKVFCVGPVFRAEDSNTHRHLTEF 316

Query: 235 YQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF--------L 275
             LD+E++F        + I +TM  + +G+ ++F            S  F        L
Sbjct: 317 VGLDIELAFNYHYHEVIESITDTMVQIFKGLRDKFQTEIQTVGKQYSSEPFKFLEPTLRL 376

Query: 276 RICYDDAIRRY----GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVWA 328
                 A+ R       D+ DL  P    +  + +    ++F V  K  L+V P Y +  
Sbjct: 377 EYTEGVAMLREAGVDMGDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFYTMPD 436

Query: 329 IPAKGGGGNRAFCDRMNE 346
              K    +     R  E
Sbjct: 437 PNDKKYSNSYDMFMRGEE 454



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                   +  YD+   G EI SG  R H ++++ +   +
Sbjct: 423 KYPLAVRPFYTMPD--------PNDKKYSNSYDMFMRGEEILSGAQRIHDAQLLTERAIH 474

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I       +      +F+ G PPHGG   G++R+ ML LG  NVR+VS+FP       
Sbjct: 475 HNIDL----EKIKSYIDSFRYGAPPHGGGGIGLERVCMLYLGLHNVRQVSMFPRDPKRLT 530

Query: 571 L 571
            
Sbjct: 531 P 531


>gi|167536188|ref|XP_001749766.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771693|gb|EDQ85355.1| predicted protein [Monosiga brevicollis MX1]
          Length = 600

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 73/373 (19%), Positives = 136/373 (36%), Gaps = 42/373 (11%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SACFEIAKSVRS 67
           L  +   + V L   VH  R  G + F+ +R      QVV   +     A  +  + +  
Sbjct: 155 LVPALANNEVTLRARVHSKRVTGRLAFVTLRQRTHTVQVVFEENATISKAMIKFIEKLNP 214

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--------EELPLPVFGERE 119
           E ++ I G V      T   +     +E+  +   +++ A        E+          
Sbjct: 215 ESIVNIVGTV--TEPATPVESCTQRDVEIKGKACFVVTSALPSLPLQIEDAARGENDPMA 272

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + +R   R LDLR +        ++ +    R  ++ E F E  +P +  ++ E    
Sbjct: 273 VGQDVRLDNRILDLRAEPNQAIFKLQSGVGALFRNFLLGEGFTEIHSPKIIGAASESGST 332

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                     +F A  Q+PQ YKQ+ +A+ F+R F+I P FR ED  + R   EF  +D 
Sbjct: 333 VFKLEYFGSPAFLA--QSPQLYKQMAIAADFERVFEIGPVFRAEDSNTHRHLTEFTGMDF 390

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVS-----NNFLRICYDDAIRRYGTDKP-- 291
           EM+F E   ++L+ ++ +   +F+  +             F R  +         + P  
Sbjct: 391 EMAFYEHYHEVLDVVDRLFVSIFKGLTEKFGHEIAMVNKQFNREPFKWLEPTLRLEWPEG 450

Query: 292 ---------------DLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVWAIPAKG 333
                          D+  P    +  + +    ++F +  K  L++ P Y +       
Sbjct: 451 IAMLREAGEVIGDFDDISTPQEKLLGRLVKEKYDTDFYILDKFPLNIRPFYTMPDAKNPA 510

Query: 334 GGGNRAFCDRMNE 346
              +     R  E
Sbjct: 511 YSNSYDLMMRGEE 523



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF                   +  YDL+  G EI SG  R H   ++ +  + 
Sbjct: 492 KFPLNIRPFYTMPDAK--------NPAYSNSYDLMMRGEEIMSGAQRIHDPALLEERATA 543

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+S + ++        AF+ G PPH G   G++R+VML LG  N+R+ SLFP      +
Sbjct: 544 HGLSLDEIKA----YIDAFRYGCPPHAGGGVGMERVVMLFLGLPNIRKTSLFPRDPKRME 599

Query: 571 L 571
            
Sbjct: 600 P 600


>gi|257470486|ref|ZP_05634577.1| asparaginyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317064694|ref|ZP_07929179.1| asparaginyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313690370|gb|EFS27205.1| asparaginyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 463

 Score =  176 bits (445), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 73/428 (17%), Positives = 142/428 (33%), Gaps = 68/428 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
           +   + +SGW+ ++R      F++I D       Q+V +     F+    +     + ++
Sbjct: 17  IDQEIEISGWIKKIRVQKNFGFIEINDGSFFKGIQIVFDTKLNNFDEISRLSIISSIRVN 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++               IE+ A  +EI   A+ L  P+  +R   E +R K   L  R
Sbjct: 77  GKLVRSQGAG-------QDIEIIANGVEIYQKAD-LDYPLQNKRHTFEYLRTK-AHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS---- 190
            +T       R+ I  ++        F+   TPI+T S  EGA +    + ++       
Sbjct: 128 TNTFSAVFRVRSVIAYAIHKFFQENGFVYVHTPIITGSDAEGAGEMFRVTTLDLNDLPKG 187

Query: 191 ----------FYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q       + F   +   P FR E   + R   EF+ +
Sbjct: 188 EDGKVDSSKDFFGKETNLTVSGQLSGETYCAAFRNIYTFGPTFRAEYSNTARHASEFWMI 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F + +  +   E +++ + +           F                      R
Sbjct: 248 EPEIAFADLEANMELAEAMVKYIIKYVLEQCPEEMEFFNQFIEKGLFDKLNNVLNSDFGR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           + Y +AI            P+   +   +EH  +     F K + +    +         
Sbjct: 308 LTYTEAIEILEKSGKKFDYPVKWGIDLQSEHERYLAEEYFKKPVFLTDYPKDI------- 360

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
              +AF  ++NE  ++     L          G    +G   +  N+   E     L M 
Sbjct: 361 ---KAFYMKLNEDGKTVRAMDLL-------APGIGEIIGGSQREDNLEILEGRINELGMN 410

Query: 395 DGDSCFFI 402
             D  F++
Sbjct: 411 TEDYGFYL 418



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 86/271 (31%), Gaps = 36/271 (13%)

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESG 367
            +    F  I +  P +                 +    +A  +    LA    +     
Sbjct: 214 ETYCAAFRNIYTFGPTFRAEYSNTARHASEFWMIEPEIAFADLEANMELAEAMVKYIIKY 273

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAA---DARNHIAQE 423
            +       +  N    + +  +L+   + D       + ++    +    D       +
Sbjct: 274 VLEQCPEEMEFFNQFIEKGLFDKLNNVLNSDFGRLTYTEAIEILEKSGKKFDYPVKWGID 333

Query: 424 LG------IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           L       +      +  ++ D+P        K I      F M           D  ++
Sbjct: 334 LQSEHERYLAEEYFKKPVFLTDYP--------KDIKA----FYMK-------LNEDGKTV 374

Query: 478 KAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
           +A   DL+  G  EI  G  R    E++    + +G++       +G      + G  PH
Sbjct: 375 RAM--DLLAPGIGEIIGGSQREDNLEILEGRINELGMNT----EDYGFYLDLRKYGSFPH 428

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G +R++M + G  N+R+V  FP + N
Sbjct: 429 SGYGLGFERMIMYVTGMTNIRDVIPFPRTPN 459


>gi|298712823|emb|CBJ48788.1| Asparaginyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 478

 Score =  176 bits (445), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 102/279 (36%), Gaps = 30/279 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
           +G  V + GWV   R      F++I D   +   QVV   D   +   + + +   + + 
Sbjct: 58  LGKTVAVKGWVRTKRDQKAFSFVEINDGSCMKGVQVVIPQDVPTYSAVERLTTGASVSVT 117

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G+V+    +         + E+ AQ++ ++        P+  +R   E +R     L  R
Sbjct: 118 GVVVESPGKG-------QRFEVKAQEVHVVGEC-PTEYPLQKKRHTLEFLRG-IAHLRPR 168

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-------- 186
            +T+      R+ +  +       E F+   +PI+TAS  EGA +    + +        
Sbjct: 169 TNTIAAVARVRSALAQATHDFFREEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVP 228

Query: 187 --------NQGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+  P       Q      A      +   P FR E+ ++ R   EF+
Sbjct: 229 TLEDGSTDYSQDFFGKPAFLTVSGQLSGETHACALGDVYTFGPTFRAENSQTTRHLAEFW 288

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
            ++ EMSF +  D ++  E  ++ V             F
Sbjct: 289 MIEPEMSFADLRDDMDNAEAFVKHVVSHAMEVCGSDLEF 327



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 48/139 (34%), Gaps = 9/139 (6%)

Query: 437 IMDFPFYEWNEE----EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           I D PF     E    E + D A   +  P+        ++         DL+  G  E+
Sbjct: 343 IKDKPFVRTEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMDLLVPGVGEL 402

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    E +        +S       +       + G  PH G   G +R+V  + 
Sbjct: 403 IGGSQREERLEQLEAKMVEFNLSP----EDYWWYNDLRRYGSVPHAGYGLGFERLVCYVT 458

Query: 552 GAKNVREVSLFPMSQNFCD 570
           G +N+R+   FP S    +
Sbjct: 459 GVENIRDAIAFPRSPGSAE 477


>gi|255656228|ref|ZP_05401637.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-23m63]
          Length = 287

 Score =  176 bits (445), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 103/274 (37%), Gaps = 28/274 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +G  V+++GW+   R      F+++ D       Q+V +     F+    +     
Sbjct: 15  KEQYIGKTVKVAGWIRTSRVSKNFGFIELNDGSFFKNMQIVFDEKVENFKEVGKLAISSS 74

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G       E ++       +E+ A+ I +   ++    P+  +R   E +R     
Sbjct: 75  ILVEG-------ELVSTEGAKQPVEIHAKSIVVEGESDS-SYPLQKKRHTLEYLR-TIAH 125

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +T       R+    ++       NF+   +PI+T S  EGA +    + ++   
Sbjct: 126 LRPRSNTFSAVFRVRSIAAYAIHKFFQERNFVYAHSPIITGSDCEGAGEMFRITTMDLND 185

Query: 191 --------------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+   A      Q    +MA  F   +   P FR E+  + R   E
Sbjct: 186 IPKTEDGKIDYTQDFFGKEANLTVSGQLNAEIMALSFRNVYTFGPTFRAENSYTGRHASE 245

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
           F+ ++ E+ F + +D +   E++++ V       
Sbjct: 246 FWMIEPEIVFADLEDNMELAEDMIKYVISYVLEN 279


>gi|257063195|ref|YP_003142867.1| asparaginyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256790848|gb|ACV21518.1| asparaginyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 467

 Score =  176 bits (445), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 98/281 (34%), Gaps = 29/281 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWV 70
            +     V ++GWV  +R      F+ + D      +    D      +++  +      
Sbjct: 14  EAYADQEVTVAGWVRSIRDMKNFGFVTLNDGSCFKDLQVVMDRESLPEYDVIAAQGVSAA 73

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G V+                EL A  I++   + E   P+  +R   E +R     
Sbjct: 74  LIVTGTVVLTPD-------AKQPFELKAANIQVEGESREDY-PLQKKRHTNEFLRTIQ-H 124

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-- 188
           L  R +        R+    ++        F+  +TPI+TAS  EGA +    + ++   
Sbjct: 125 LRPRTNLFRAVFRVRSVAAYALHEFFQERGFVYVNTPIITASDAEGAGEMFRVTTIDPAN 184

Query: 189 ------------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q +    A  F   +   P FR ED  + R   E
Sbjct: 185 PPLDDKGNVDYSQDFFGKATNLTVSGQLQAESFAMAFGDVYTFGPTFRAEDSNTARHAAE 244

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           F+ ++ E++F + DD +N  E++L+ V            N 
Sbjct: 245 FWMVEPEIAFADLDDDMNLAEDMLKHVINTVLEKCPDEMNM 285



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 48/144 (33%), Gaps = 24/144 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P                 F M          +D  ++ A  
Sbjct: 342 HERYLTEEHFKKPTFVTDYP------------VEIKAFYMR-------LNDDGKTVAAMD 382

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    +V+      + +       ++       + G   H G   
Sbjct: 383 C-LVPGIGEIVGGSQREERLDVLENRIRELDMDP----EQYKFYCDLRRYGSCRHAGFGL 437

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +R+VM L G  N+R+V   P +
Sbjct: 438 GFERMVMYLTGVSNIRDVLPHPRT 461


>gi|228472298|ref|ZP_04057064.1| asparagine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276501|gb|EEK15225.1| asparagine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 474

 Score =  176 bits (445), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 55/281 (19%), Positives = 110/281 (39%), Gaps = 31/281 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVL 71
            +++G  V L GWV   R +    F+ + D   +   QVV + +    E  K + +   +
Sbjct: 10  KTNIG-EVTLRGWVRTFRSNR---FIALNDGSTLSNLQVVVDFEHTPEETLKRITTGAAI 65

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G V+    +  +       IE+ A ++ IL        P+  ++   E +R +   L
Sbjct: 66  EVKGKVVESQGKGQS-------IEVQATEVTILGDCNPDEYPIQPKKHSLEFLR-EQAHL 117

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---- 187
            +R +     +  R+ +  ++      + F   +TPI+T S  EGA +    + ++    
Sbjct: 118 RVRTNAFGAIMRVRSTLAYAIHKYFQEKGFFYVNTPIITGSDAEGAGEMFRVTTLDAKNP 177

Query: 188 ----------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                     +  F+          Q +    A    + +   P FR E+  + R   EF
Sbjct: 178 PLTETGEVDYKKDFFGRETNLTVSGQLEGETFAMSLGKIYTFGPTFRAENSNTSRHLAEF 237

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           + ++ EM+F +  D +N  E+ ++ V +           FL
Sbjct: 238 WMIEPEMAFYDLIDNMNLAEDFIKNVLKYTLEVRREDIEFL 278



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 47/121 (38%), Gaps = 14/121 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M           D  +++A   D++  G  EI  G  R    EV+ Q  +
Sbjct: 366 DYPAKIKAFYMR-------LNEDGKTVRAM--DILFPGIGEIVGGSQREERYEVLKQKIA 416

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           ++G+ ++ +           + G   H G   G +R+V+   G  N+R+V  +P +    
Sbjct: 417 DLGMDEQTLW----WYLELRKFGTAVHSGFGLGFERLVLFTTGMTNIRDVIPYPRTPQSA 472

Query: 570 D 570
           +
Sbjct: 473 E 473


>gi|58582041|ref|YP_201057.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188576346|ref|YP_001913275.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|75435313|sp|Q5H049|SYN_XANOR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|58426635|gb|AAW75672.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188520798|gb|ACD58743.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 464

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 119/385 (30%), Gaps = 54/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D       QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +++    +  +        E+ A  +EI+   E+        +        +   L  R 
Sbjct: 77  VLVKSQGKGQS-------FEIQASGVEIVGWVEDPLTYPIQPKPMTPEFLREVAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +        R  +  ++        F   STPI+T S  EGA      S ++        
Sbjct: 130 NLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMFRVSTLDMVNLPRDA 189

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q           + +   P FR E+  + R   EF+ ++
Sbjct: 190 TGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHLAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNFLRI 277
            E++F +  +     E  L+ VF    +                        ++  F +I
Sbjct: 250 PEIAFADLAEDARLAEQFLKYVFRAVLDERGDDLAFLAERVDKNAISKLEAFINAPFEQI 309

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA++           P+   +   TEH         ++     P             
Sbjct: 310 DYTDAVKLLQHAGKTFDFPVEWGLDLQTEHERW-----LTEEHIGRPVVVTNYPEHIKAF 364

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 365 YMRLNDDGKTVAAMDVLAPGIGEII 389



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 71/218 (32%), Gaps = 40/218 (18%)

Query: 356 LAYIFWRLDESGNVAGMGPV-AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           LA++  R+D++        + A    I  T+A+++              G          
Sbjct: 283 LAFLAERVDKNAISKLEAFINAPFEQIDYTDAVKLLQHAGKTFDFPVEWG---------- 332

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH-NPFTMPQGGMESLKGND 473
                   E  +   +      + ++P              H   F M          +D
Sbjct: 333 -LDLQTEHERWLTEEHIGRPVVVTNYP-------------EHIKAFYMR-------LNDD 371

Query: 474 LLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
             ++ A   D++  G  EI  G  R    +V+    +  G+ K      +       + G
Sbjct: 372 GKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAQFGLDK----EHYSWYRDFRRYG 425

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             PH G   G +R+V+ + G  N+R+   +P +    +
Sbjct: 426 SVPHAGFGLGFERLVVYVCGLSNIRDAIPYPRAPGSAE 463


>gi|226328241|ref|ZP_03803759.1| hypothetical protein PROPEN_02134 [Proteus penneri ATCC 35198]
 gi|225202974|gb|EEG85328.1| hypothetical protein PROPEN_02134 [Proteus penneri ATCC 35198]
          Length = 402

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/305 (21%), Positives = 120/305 (39%), Gaps = 33/305 (10%)

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
           P+    E  K      +L   G V             TG++ +   ++ +L+ A   PLP
Sbjct: 2   PEGIYNEQFKKWDLGDILGARGRV---------FKTKTGELSVHCTEVRLLTKALR-PLP 51

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL-TA 171
                   + +R++ R+LDL  +   +     R++++  +R  M+ + F+E  TP++ T 
Sbjct: 52  DKFHGLADQEMRYRQRYLDLISNEESRKTFQIRSQVMAGIRQFMVNKGFMEVETPMMQTI 111

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                AR F+          Y L  AP+ Y + L+  GFDR F+I   FR+E   S R  
Sbjct: 112 PGGASARPFITHHNALDIDMY-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGV-SPRHN 169

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF  +++ M++ +  D++   E + R + E                   ++ +YG  + 
Sbjct: 170 PEFTMMELYMAYADYRDLIELTEELFRTLTENVLG--------------SSLVKYGDQEF 215

Query: 292 DLRNPIIMHNVTE-HFVHSEFRVFSKILSVNPGYEVW----AIPAKGGGGNRAFCDRMNE 346
           D   P     + E    +    V + +  ++    +         K  G  R  C+   E
Sbjct: 216 DFGKPFAKLTMKEAICKYRPETVMADLDDMDKAVAIAQSIGIKIEKSWGLGRVQCEIFEE 275

Query: 347 WARSQ 351
            A S 
Sbjct: 276 VAESH 280



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 66/205 (32%), Gaps = 21/205 (10%)

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
                   P AK          R    M D D       D     + +   +   +  LG
Sbjct: 212 DQEFDFGKPFAKLTMKEAICKYRPETVMADLDDM-----DKAVAIAQSIGIKIEKSWGLG 266

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
            + C  FE               E  +         P       + ND       +++  
Sbjct: 267 RVQCEIFEEV------------AESHLIQPTFIIEYPAEVSPLARRNDDNPFITDRFEFF 314

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAA 541
             G EI +G    + ++   + F +    KE  +            A + G+PP  G+  
Sbjct: 315 IGGREIGNGFSELNDAQDQAERFEDQVRQKEAGDAEAMFFDHDYITALEHGLPPTAGLGI 374

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           GIDR+VML   +  +R+V LFP  +
Sbjct: 375 GIDRMVMLFTDSHTIRDVILFPAMR 399


>gi|217034008|ref|ZP_03439430.1| hypothetical protein HP9810_891g12 [Helicobacter pylori 98-10]
 gi|216943516|gb|EEC22967.1| hypothetical protein HP9810_891g12 [Helicobacter pylori 98-10]
          Length = 501

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 67/282 (23%), Positives = 119/282 (42%), Gaps = 19/282 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + G V  +R  G   F+ I D   I Q   + D    E  KS++    L +  +V+   
Sbjct: 59  SIVGRVKLLRLMGKACFIKIEDESAILQAYVSQDELNDE-FKSLKKH--LEVGDIVL--- 112

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            +       TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K+
Sbjct: 113 VKGFPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKD 171

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           + K R+ I++S+R     E F+E  TP++        AR F+      +   Y L  AP+
Sbjct: 172 VFKKRSLIVSSVRKFFETEGFLEVETPMMHPIPGGANARPFITYHNALEIERY-LRIAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++   + +   
Sbjct: 231 LYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLIELSKRLFDY 289

Query: 260 VFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           + +          ++     N    I Y DA+   G    D+
Sbjct: 290 LLKTLNLPSKIIYNDMEVDFNQTSVISYLDALETIGGISKDI 331



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL GAK++++V LFP
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|294665953|ref|ZP_06731217.1| asparaginyl-tRNA synthetase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292604256|gb|EFF47643.1| asparaginyl-tRNA synthetase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 464

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 119/385 (30%), Gaps = 54/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D       QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +++    +  +        E+ A  ++IL   E+        +        +   L  R 
Sbjct: 77  VLVKSQGKGQS-------FEIQASGVDILGWVEDPLTYPIQPKPMTPEFLREVAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +        R  +  ++        F   STPI+T S  EGA      S ++        
Sbjct: 130 NLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMFRVSTLDMVNLPRDA 189

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q           + +   P FR E+  + R   EF+ ++
Sbjct: 190 SGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHLAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNFLRI 277
            E++F +  +     E  L+ +F    +                        ++  F +I
Sbjct: 250 PEIAFADLAEDARLAEQFLKYLFRAVLDERGDDLAFLAERVDKNAIAKLEAFINAPFEQI 309

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA++           P+   +   TEH         ++     P             
Sbjct: 310 DYSDAVKLLQNSGKKFDFPVEWGLDLQTEHERW-----LTEEHIGRPVVVTNYPEHIKAF 364

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 365 YMRLNDDGKTVAAMDVLAPGIGEII 389



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 12/152 (7%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKA 479
           ++  +  +F + +++      E E+ +   H                  ++ ND     A
Sbjct: 317 LLQNSGKKFDFPVEWGLDLQTEHERWLTEEHIGRPVVVTNYPEHIKAFYMRLNDDGKTVA 376

Query: 480 FQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              D++  G  EI  G  R    +V+    +  G+ K      +       + G  PH G
Sbjct: 377 -AMDVLAPGIGEIIGGSQREERLDVLDARMAQFGLDK----EHYSWYRDFRRYGSVPHAG 431

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              G +R+V+ + G  N+R+   +P +    +
Sbjct: 432 FGLGFERLVVYVCGLSNIRDAIPYPRAPGSAE 463


>gi|332519134|ref|ZP_08395601.1| asparaginyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332044982|gb|EGI81175.1| asparaginyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 476

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 54/289 (18%), Positives = 108/289 (37%), Gaps = 30/289 (10%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAK 63
           + +   L        V + GWV   R      F+ + D   +   Q V + ++   +  K
Sbjct: 3   SKTVAQLLKETPLQEVEIKGWVRTFRAKR---FIALNDGSTLNNIQCVVDFENTPEDTLK 59

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            + +   + I G ++    +  N       +E+    IEIL  ++    P+  ++   E 
Sbjct: 60  RITTGAAVHIKGELVESQGKGQN-------VEIVVSTIEILGDSDPETYPIQPKKHSFEF 112

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R +   L  R +T    +  R+ +  ++        F    TPI+T S  EGA +    
Sbjct: 113 LR-ENAHLRTRTNTFSAVMRLRSALSFAIHKYFNDNGFYYMHTPIITGSDAEGAGEMFRV 171

Query: 184 SRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           S ++Q               +F+          Q +    A    + +   P FR E+  
Sbjct: 172 STLDQKKPPLTEDGDIDHTKNFFGKDTNLTVSGQLEAETYAMSLGKVYTFGPTFRAENSN 231

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           + R   EF+ ++ E++F++    ++  E+ ++ V       N     FL
Sbjct: 232 TSRHLSEFWMIEPEVAFMDLAGNMDLAEDFMKSVISYILENNAEDLEFL 280



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 14/118 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M           D  +++A   D++  G  E+  G  R    +V+ +  +
Sbjct: 368 DYPANIKAFYMR-------LNEDGKTVRAM--DILFPGIGEMVGGSQREERLDVLKEKMA 418

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + I     E          + G   H G   G +R+VM   G  N+R+V  +P +  
Sbjct: 419 VLNIP----EEELWWYLDLRKYGTAVHSGFGLGFERLVMFATGMSNIRDVIPYPRTPQ 472


>gi|157868974|ref|XP_001683039.1| aspartyl-trna synthetase [Leishmania major strain Friedlin]
 gi|68223922|emb|CAJ04412.1| putative aspartyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 641

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 5/262 (1%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SCG+ G    G  V +   + R R  G + FL +R     +           + A+S+  
Sbjct: 124 SCGESGCVREGDEVTVRARLERTRGRGKLAFLHLRQPPLESVQAVCEGKELTKQARSITL 183

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           E ++ + G+V  R A+T   +      EL    + ++S A       + +       R  
Sbjct: 184 ESIVDVTGIV--RRADTPVQSTTCQGWELQVTALHVVSQAATPLPFPYRDTNARLDTRLN 241

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +R +DLR + +       + +  S R  ++A +FIE  TP L  ++ EG  +        
Sbjct: 242 HRVMDLRTEKMIAASRLVSALGQSFRNELLARDFIEVHTPKLLGAASEGGSNVFRVDYFE 301

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + ++ A  Q+PQ +KQ+++     R F++ P FR E+  + R   EF  LD EM   +  
Sbjct: 302 RKAYLA--QSPQLHKQMMVMGDAMRVFEVGPVFRAENSLTHRHLTEFVGLDGEMVIKDSH 359

Query: 248 -DILNTMENVLRGVFEEFSNGN 268
            ++L+ +E V+  V    +  +
Sbjct: 360 TEVLDVLEPVMCAVLAHLTQQH 381



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 24/152 (15%)

Query: 422 QELG-IINCNCFEFCWIMD-FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + LG +I        +++D FP             +  PF        S+          
Sbjct: 512 RRLGQLIKERYGVDLYVIDSFP------------SSARPF-YTMPVDPSMPDGP-----T 553

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+   G EI SG  R H  E++ Q  S   + K  V++       +F+ G  PHGG 
Sbjct: 554 RSYDMYLRGEEICSGAQRVHQIELLEQRLSAKKVDKVSVKD----YVDSFRYGAWPHGGF 609

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             G++RI +  LG  ++R+VSLFP        
Sbjct: 610 GLGLERIALFFLGLDDIRQVSLFPRDPKRISP 641


>gi|168182869|ref|ZP_02617533.1| aspartate--tRNA ligase [Clostridium botulinum Bf]
 gi|237794310|ref|YP_002861862.1| aspartyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182673947|gb|EDT85908.1| aspartate--tRNA ligase [Clostridium botulinum Bf]
 gi|229263481|gb|ACQ54514.1| aspartate--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 429

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 70/327 (21%), Positives = 133/327 (40%), Gaps = 24/327 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              + L GW+H++R    I FL IRD  G+ Q + + D         V+ E ++ I G+V
Sbjct: 14  NEKINLQGWIHKIRKLKNITFLIIRDRSGLVQCIVDNDKL---DLSQVKIESIVSITGVV 70

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRR 135
              +             E+  + +EI++ A  +          E         R L LR 
Sbjct: 71  KESTNGLNP-------FEIQVENLEIINAALDKPPIEINKENLEINLDTMLNNRILSLRH 123

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             ++     +  I+N  R  +  E F E  TP +     EG  +          ++ A  
Sbjct: 124 PKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFENTAYLA-- 181

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTME 254
           Q+PQ YKQ+++ +GF++ F+I   +R E+  ++R   E+  +D+E+ F+E + DI+   E
Sbjct: 182 QSPQFYKQMMVGAGFEKVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDEKDIMEVEE 241

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
            +L+ + E+ +         L    D  + +  T+ P +     +  +++ +  +     
Sbjct: 242 RLLKFILEKLNKECKEYFALL----DSELPKIETEIPKITFKEALDILSKEYNKNNLTC- 296

Query: 315 SKILSVNPGYEVWAIPAKGGGGNRAFC 341
                ++P  E           N  F 
Sbjct: 297 ----DLDPEGEKLICKYAKKKLNSDFI 319



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 76/213 (35%), Gaps = 16/213 (7%)

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  DE   +     + K +     +  +    + D +        P      A D  +
Sbjct: 227 IGFIEDEKDIMEVEERLLKFILEKLNKECKEYFALLDSELPKIETEIPKITFKEALDILS 286

Query: 419 HIAQELGI---INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
               +  +   ++    +               +KK++      T        +    L 
Sbjct: 287 KEYNKNNLTCDLDPEGEKLI---------CKYAKKKLNSDFIFLTNYPREKRPMYTMPLG 337

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
                 +DL+  G EI +GG R H   +++      G + +  E+        F+ GMP 
Sbjct: 338 KDGTHSFDLLFRGIEITTGGQRIHDYSMLIDNMKFKGFNPKDYES----YLSVFKYGMPK 393

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           HGG+A G++R+   LLG +NVRE +L    +  
Sbjct: 394 HGGLAIGLERLTARLLGLENVREAALITRDRTR 426


>gi|256847329|ref|ZP_05552775.1| asparaginyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715993|gb|EEU30968.1| asparaginyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 432

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 71/351 (20%), Positives = 130/351 (37%), Gaps = 33/351 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAK-SVRSEW 69
              VG  V++  W+   R  G I FL +RD  G  Q +    + D A FE AK  +  E 
Sbjct: 10  PQHVGETVKIGVWLTDKRSSGKIAFLQLRDGSGFFQGIIRKNDVDEATFEAAKHDLHPET 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              + G +                 E+    +EI+  ++E P    G +E+       +R
Sbjct: 70  SFVVTGEIAEDKRSKF-------GYEIHINDLEIVGQSDEYP---IGNKEHGIDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R+++  S         F +   PILT+S+PEG  +       ++ 
Sbjct: 120 HLWLRSRKPWALMRIRSQVKLSTMEFFDKHGFTQFDAPILTSSAPEGTTELFNVDYFDED 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A    R + + P FR E  ++ R   EF+ ++ EM++  +++ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMALGRIYTMGPTFRAEKSKTRRHMTEFWMIEPEMAWCHEEES 236

Query: 250 LNTMENVLRGVFEEFSNGN----------------TVSNNFLRICYDDAIRRYGTDKPDL 293
               E  +  + ++  +                       + RI Y +AI        D+
Sbjct: 237 EEIQEQYVAYLIQDLIDKCPTELEMVGRSVESLKPFTELPYPRITYKEAIEMLQKGGMDV 296

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           +         E F+  +F     I +     + + +P       +  C  +
Sbjct: 297 KYGDDFGAPEETFLADQFNKPVFIKNYPRSIKAFYMPTDPEDAQQVICADL 347



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 53/157 (33%), Gaps = 27/157 (17%)

Query: 414 ADARNHIAQELGIINC----NCF-EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                    + G        + F +  +I ++P        + I   + P        + 
Sbjct: 292 GGMDVKYGDDFGAPEETFLADQFNKPVFIKNYP--------RSIKAFYMPT--DPEDAQQ 341

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +   DLL+ + +         EI  G  R++  E +       G+SK      +G     
Sbjct: 342 VICADLLAPEGYG--------EIIGGSERSYDYEYITSKLEENGLSK----EDYGWYDDL 389

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            + G  PH G   G++R +  +    ++RE   FP  
Sbjct: 390 RKYGSVPHSGFGMGLERFLSWVTLQDHIRENIPFPRM 426


>gi|84623953|ref|YP_451325.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|123725534|sp|Q2P326|SYN_XANOM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|84367893|dbj|BAE69051.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 464

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 119/385 (30%), Gaps = 54/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D       QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +++    +  +        E+ A  +EI+   E+        +        +   L  R 
Sbjct: 77  VLVKSQGKGQS-------FEIQASGVEIVGWVEDPLTYPIQPKPMTPEFLREVAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +        R  +  ++        F   STPI+T S  EGA      S ++        
Sbjct: 130 NLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMFRVSTLDMVNLPRDA 189

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q           + +   P FR E+  + R   EF+ ++
Sbjct: 190 TGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHLAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNFLRI 277
            E++F +  +     E  L+ VF    +                        ++  F +I
Sbjct: 250 PEIAFADLAEDARLAEQFLKYVFRAVLDERGDDLAFLAERVDKKAISKLEAFINAPFEQI 309

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA++           P+   +   TEH         ++     P             
Sbjct: 310 DYTDAVKLLQHAGKTFDFPVEWGLDLQTEHERW-----LTEEHIGRPVVVTNYPEHIKAF 364

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 365 YMRLNDDGKTVAAMDVLAPGIGEII 389



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 70/218 (32%), Gaps = 40/218 (18%)

Query: 356 LAYIFWRLDESGNVAGMGPV-AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           LA++  R+D+         + A    I  T+A+++              G          
Sbjct: 283 LAFLAERVDKKAISKLEAFINAPFEQIDYTDAVKLLQHAGKTFDFPVEWG---------- 332

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH-NPFTMPQGGMESLKGND 473
                   E  +   +      + ++P              H   F M          +D
Sbjct: 333 -LDLQTEHERWLTEEHIGRPVVVTNYP-------------EHIKAFYMR-------LNDD 371

Query: 474 LLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
             ++ A   D++  G  EI  G  R    +V+    +  G+ K      +       + G
Sbjct: 372 GKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAQFGLDK----EHYSWYRDFRRYG 425

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             PH G   G +R+V+ + G  N+R+   +P +    +
Sbjct: 426 SVPHAGFGLGFERLVVYVCGLSNIRDAIPYPRAPGSAE 463


>gi|68485621|ref|XP_713293.1| probable aspartate-tRNA synthetase [Candida albicans SC5314]
 gi|68485724|ref|XP_713240.1| probable aspartate-tRNA synthetase [Candida albicans SC5314]
 gi|46434721|gb|EAK94123.1| probable aspartate-tRNA synthetase [Candida albicans SC5314]
 gi|46434775|gb|EAK94176.1| probable aspartate-tRNA synthetase [Candida albicans SC5314]
          Length = 578

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 70/290 (24%), Positives = 123/290 (42%), Gaps = 28/290 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAKSVRS 67
           DL V++ G  V     VH+ R  G  ++FL +R    + Q  +  N D+    ++K +  
Sbjct: 117 DLSVANDGETVTFRARVHKTRQQGATMVFLTLRQQSELIQALLKTNKDTDATAVSKQMVK 176

Query: 68  E-------WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                    ++ ++G V     +  +A +    +E+   KI  +    E    +  +   
Sbjct: 177 WTGSINLESIVLVEGKVAKVEEKIKSATV--QDVEILISKIYTIQETPEQLPLLIEDASR 234

Query: 121 PE-------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
            E               R   R +DLR  T       ++ +    R  +I + F E  TP
Sbjct: 235 SEKESEELGLPGVNLDTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLIKKGFTEIHTP 294

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            +  ++ EG  +    +     +F A  Q+PQ YKQ L+A+ F++ F+IAP FR E+  +
Sbjct: 295 KIIGAASEGGSNVFEINYFKGSAFLA--QSPQLYKQQLIAADFEKVFEIAPVFRAENSNT 352

Query: 228 DRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            R   EF  LD+EM+F    D++L  +E +   +F E     +     +R
Sbjct: 353 HRHMTEFTGLDLEMAFEQHYDEVLEVLEELFVFIFTELKTRFSKEIATVR 402



 Score =  102 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 44/118 (37%), Gaps = 10/118 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF             D     +  YD    G EI SG  R H  +++ Q    
Sbjct: 468 KFPLAVRPFYTMPDS------EDPR--YSNSYDFFMRGEEILSGAQRIHDPKLLTQRMKE 519

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             +   V          AF  G PPH G   G++R+VM  L  KN+R  SLFP     
Sbjct: 520 HEVDPNV--PGLNDYVEAFTYGCPPHAGGGIGLERVVMFFLDLKNIRRASLFPRDPKR 575


>gi|158294413|ref|XP_315584.3| AGAP005576-PA [Anopheles gambiae str. PEST]
 gi|157015553|gb|EAA11760.4| AGAP005576-PA [Anopheles gambiae str. PEST]
          Length = 543

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/277 (23%), Positives = 109/277 (39%), Gaps = 23/277 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL      + V + G VH  R  G   FL +R        +  V         + + S+ 
Sbjct: 91  DLSHCQKDALVWVRGRVHTSRCKGKQCFLVLRQQSSTVQCLLAVNEQVSKQMVKFSGSIP 150

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ +   V+    E    +     +EL   ++ +LS A+        +   PE    
Sbjct: 151 RESIIDLKAKVV--PVEQRIESCTEQTLELHVLELFLLSAAKAQLPLQIEDASRPEKSDD 208

Query: 123 ----------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                       R   R LDLR             +    R  + A+ F E  TP + ++
Sbjct: 209 PEALKIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDVLTAKGFTEIHTPKIISA 268

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + EG  +    S     ++ A  Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R   
Sbjct: 269 ASEGGANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLT 326

Query: 233 EFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGN 268
           EF  LD+EM+F     ++L+T+ N    +F+   +  
Sbjct: 327 EFVGLDLEMAFKYHYHEVLDTIGNTFTEMFKGLRDHY 363



 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF             D  + K +  YD+   G EI SG  R H  E +++   
Sbjct: 435 KFPLAVRPFYTM---------PDPANAKYSNSYDMFMRGEEILSGAQRIHDPEYLIERAK 485

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             GI      ++      AF+ G PPH G   G++R+VML LG  N+R+ S+FP      
Sbjct: 486 LHGIDL----SKIAAYIDAFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRL 541

Query: 570 DL 571
             
Sbjct: 542 TP 543


>gi|45187834|ref|NP_984057.1| ADL039Cp [Ashbya gossypii ATCC 10895]
 gi|44982618|gb|AAS51881.1| ADL039Cp [Ashbya gossypii ATCC 10895]
          Length = 556

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 75/320 (23%), Positives = 122/320 (38%), Gaps = 34/320 (10%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPD------SACFEIA 62
            +L   D G  V L   VH VR  G  + FL +R    + Q +   +          + A
Sbjct: 97  AELTAEDEGKEVLLRSRVHTVRQQGATLAFLMLRQRSSLIQALVKANAEGTVSKQMVKWA 156

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            S+  E ++ + G+V        +A +     E+   ++  +S   +    +  +    E
Sbjct: 157 GSLNLESIVLVRGVVRKVEEPVKSATV--QDFEIQITQLHTISETPQQLPILIEDASRSE 214

Query: 123 -------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                          R   R +DLR  T       +  +    R    + NF E  TP L
Sbjct: 215 AEAEAAGLPVVNLDTRLDARVIDLRTVTNQAIFRIKAGVCGLFREFFQSRNFTEIHTPKL 274

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
            AS  EG  +          ++ A  Q+PQ YKQ L+A+ F+R F++AP FR E+  + R
Sbjct: 275 LASPSEGGANVFEVKYFKGNAYLA--QSPQFYKQQLIAADFERVFEVAPVFRAENSNTHR 332

Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
              EF  +D+EM+F E   +++  M  +   VF E            R   + A  R   
Sbjct: 333 HMTEFTGVDLEMAFEEHYHEVIEVMGEMFMFVFTELKK---------RFAREIAQVRKQY 383

Query: 289 DKPDLRNPIIMHNVTEHFVH 308
              + + P     V  H+  
Sbjct: 384 PVEEFKFPADGKMVILHYKE 403



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 38/119 (31%), Positives = 48/119 (40%), Gaps = 12/119 (10%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K      PF TMP                +  YD    G EI SG  R H  E++ +   
Sbjct: 446 KFPAELRPFYTMPDPADPRY---------SNSYDFFMRGEEIMSGAQRIHDPELLRERMK 496

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           + G+  E     F     AF  G PPH G   G++RIVM  L  KN+R  +LFP     
Sbjct: 497 HHGLQPEDA--GFKDYCDAFTYGCPPHAGGGIGLERIVMFYLDLKNIRRATLFPRDPKR 553


>gi|302347902|ref|YP_003815540.1| lysyl-tRNA synthetase (LysS) [Acidilobus saccharovorans 345-15]
 gi|302328314|gb|ADL18509.1| lysyl-tRNA synthetase (LysS) [Acidilobus saccharovorans 345-15]
          Length = 498

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 68/361 (18%), Positives = 137/361 (37%), Gaps = 36/361 (9%)

Query: 2   HRYR-THSCGDLG--VSDVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           H+Y  TH+   +    +  G          +  +G V  +R HG   F+DI D     Q+
Sbjct: 26  HKYPITHTIRQIKDLAASRGDRPHEPFLRDISTAGRVANIRRHGKASFVDIFDEGERLQL 85

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               +    E+    +        G ++    +      + G++ L  +  ++L+ A   
Sbjct: 86  YLRVN----ELGDRYKEFLYYVGRGDIIGVRGDLFYT--MKGELSLLVKDYQLLAKALIE 139

Query: 111 PLPVFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           P       +     R+ +R++D L  D   + +  R   I  +R  + ++ F+E  TP+L
Sbjct: 140 PPDW---TKLSPEFRYAHRYVDFLYNDQARRAMEVRFNTIKEIRQYLYSKGFVEVETPVL 196

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   A+ F+         +Y L  + + Y +  +  GFD+ F+I   FR+ED    
Sbjct: 197 QPVYGGALAKPFMTHVNALDEDWY-LRISLELYLKRFIVGGFDKVFEIGKVFRNEDIDVT 255

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  +++  ++ + +DI++  E+++R V  +           LRI   D       
Sbjct: 256 HNP-EFTMMELYWAYADYNDIMDLTEDMIRTVAAKVLGTTQ-----LRIPMPDGSVAEVD 309

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR-----AFCDR 343
                R   +   ++E    +   V      +    +   +  +GG  +R        D+
Sbjct: 310 VGQRFRRETMFDLLSEALGKNIEEVSDD--EMKRMLDQMGLVPRGGVYSRGLMVEKLFDK 367

Query: 344 M 344
           +
Sbjct: 368 L 368



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 58/154 (37%), Gaps = 27/154 (17%)

Query: 417 RNHIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           R  + ++L   ++     +  +++D+P      E   +   H                  
Sbjct: 357 RGLMVEKLFDKLVTPKLIQPTFVLDYPI-----ETTPLCKPHR----------------S 395

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQ 530
                 +++L   G E+A+     +   +  + F      ++              RA  
Sbjct: 396 KPGLVERFELYVAGVELANAYTELNDPVLQDRLFKEEQEMRKRGDLEAHPYDVDFVRALS 455

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GMPP GG+  GIDR+VM+  G  +++EV  FPM
Sbjct: 456 YGMPPTGGLGVGIDRLVMMFTGVSSIKEVLPFPM 489


>gi|258516710|ref|YP_003192932.1| asparaginyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257780415|gb|ACV64309.1| asparaginyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 430

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 68/301 (22%), Positives = 113/301 (37%), Gaps = 31/301 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ---VVANPDSACFEIAKSVRSEWVLCI 73
           V   V++ GW+   R  G I F+ IRD  G  Q   V    D   FE+A SV  E  +  
Sbjct: 13  VNQEVQIEGWLFNKRSSGKIRFIIIRDGSGQVQATLVRDETDPELFELASSVTQESSIRA 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            GLV                 EL+   IEI+  +++ P      +E+        R L +
Sbjct: 73  TGLVREEPRS-------PSGYELTVTGIEIVGGSQDYP---ITLKEHGVDFLADRRHLWI 122

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R+ I  ++R      +FI   +PI+TA + EG  +        + ++ A
Sbjct: 123 RGPRQASILRIRSEIEQAIRDFFYERDFILADSPIITALAAEGTTNLFEIDYHGEKAYLA 182

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
             Q  Q Y +   A    R +   P FR E  ++ R   EF+  + EM++ + +  L   
Sbjct: 183 --QTGQLYSE-ATAMALGRVYNFGPVFRAEKSKTRRHLLEFWMAEAEMAYCDHEANLKIQ 239

Query: 254 ENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRYGTDKPDLRNPII 298
           E ++  + +      ++                  F RI Y +A++       D      
Sbjct: 240 EELVYYIIQRVLQRKSLELKTLKRDIGKLEAVSLPFPRISYTEAVKILRDSGEDFNWGDD 299

Query: 299 M 299
            
Sbjct: 300 F 300



 Score = 67.4 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 46/142 (32%), Gaps = 5/142 (3%)

Query: 426 IINCNCFEFCWIMDF--PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           I+  +  +F W  DF  P      E        + F             +   +     D
Sbjct: 286 ILRDSGEDFNWGDDFGAPQETLLSERFASPLFVHRFPAEIKAFYMKPDPEDSKVVLGA-D 344

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+         G    + +++L     +  +    E  F       + G  PH G   G+
Sbjct: 345 LLAPEGYGEIIGGGQRIEDLVLLRQKIMQHNLP--EEEFQWYLDLRRYGSVPHAGFGLGL 402

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R V  + G +++RE   FP  
Sbjct: 403 ERTVAWICGIEHIREAVPFPRM 424


>gi|328766451|gb|EGF76505.1| hypothetical protein BATDEDRAFT_14798 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 531

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 80/352 (22%), Positives = 138/352 (39%), Gaps = 27/352 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPD---- 55
           ++  RT    ++  S VGS + LS  V  VRP G  ++F+ +R      Q V   +    
Sbjct: 69  LNETRT-LISEVNASHVGSSILLSARVQTVRPTGSKMLFMTLRQGTDSLQTVLTVNAESV 127

Query: 56  -SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA------- 107
                + A S+  E ++ I G V+          +   + EL   KI I+S A       
Sbjct: 128 SKHMLKFATSISPESLVLISGEVIKVDVLITGCTV--QEYELKVSKIFIVSEAARLPFTL 185

Query: 108 ------EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENF 161
                 +       G  +     R   R +DLR  T       +  +    R  +  ++F
Sbjct: 186 EDATRPDSDFTEESGFSKINLETRLDNRVIDLRTITNQAIFRIQAGVSKLFREFLDNKDF 245

Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           +E  TP L  ++ EG  +    S      F A  Q+PQ YKQ+++ + F+R ++IAP FR
Sbjct: 246 VEIHTPKLIGAASEGGANVFRVSYFKGCGFLA--QSPQLYKQMMVCADFERVYEIAPVFR 303

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
            E+ ++ R   EF  LDMEM+F E   ++L+ ++ +   +F+   +        ++  Y 
Sbjct: 304 AENSQTHRHMTEFMGLDMEMAFQEHYHEVLDVLDGLFVSIFQGLESRYKKELATIQRQYP 363

Query: 281 DAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
                +      L  P  +  +       E   F    +         +  K
Sbjct: 364 YEPFMFLEKSLRLEFPEAIAML--RGAGVEIGDFDDFNTAQERLLGKLVKEK 413



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 56/150 (37%), Gaps = 22/150 (14%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG +    ++     DF  +  +    K   A  PF                   +  
Sbjct: 404 RLLGKLVKEKYK----TDF--FILD----KFPLAVRPFYTMPD--------PSRPGYSNS 445

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H S  + Q     G+    ++        AF+ G PPH G   
Sbjct: 446 YDFFVRGEEILSGAQRIHDSAFLKQRAEEHGVDISTIQP----YIDAFKYGAPPHAGGGI 501

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G++R+VML L   N+R+ SLFP        
Sbjct: 502 GLERVVMLYLDLGNIRKTSLFPRDPKRLSP 531


>gi|169848307|ref|XP_001830861.1| lysine-tRNA ligase [Coprinopsis cinerea okayama7#130]
 gi|116508030|gb|EAU90925.1| lysine-tRNA ligase [Coprinopsis cinerea okayama7#130]
          Length = 592

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/303 (20%), Positives = 122/303 (40%), Gaps = 25/303 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA-----NPDSACFEIAKS 64
           + G    G    L+G +H +R  G  + F D+       Q++A     +      E+ + 
Sbjct: 109 ESGNKLEGKTESLAGRIHNIRASGSKLRFYDLHGEGVKVQIMATQQDSDNPDGFVELHEH 168

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
            +   ++ + G           +    G++ +S   + +L+      LP        +  
Sbjct: 169 FKRGDIVGVVGT---------PSRTKKGELSISPSSMVLLAP-NLHQLPSSHFGLKDQET 218

Query: 125 RFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           R++ R+LDL  +   +   + R+RII  +R  +    F+E  TPI +  +        V 
Sbjct: 219 RYRKRYLDLILNENSRKIFITRSRIIAYIRRFLDNLGFMEVETPITSLLAGGATAKPFVT 278

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              +      L  AP+ Y + L+  G DR ++I   FR+E       P EF   +  M++
Sbjct: 279 HHNDLNLDLFLRIAPELYLKQLVVGGLDRVYEIGRVFRNEGIDLTHNP-EFTICEFYMAY 337

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN--PIIMHN 301
            +Q+D++   E +L G+ +  + G  +  +      D    + G  + +L    P   ++
Sbjct: 338 ADQEDLMEITEIMLEGLVKSLTGGTKLIYH-----PDGNKGQEGAKQIELEFKRPWKRYD 392

Query: 302 VTE 304
           + E
Sbjct: 393 MIE 395



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 39/107 (36%), Gaps = 4/107 (3%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++    G E  +     +        F      KE  +    G       A +
Sbjct: 476 RPGLCERFEGFMCGKEFCNAYTELNDPFEQRLRFEEQVRQKEQGDEEAQGIDETFIDALE 535

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
            G+ P GG   GIDR+VM L  + N++EV LFP  +        +P 
Sbjct: 536 HGLAPTGGWGLGIDRLVMFLTDSTNIKEVLLFPAMKPEATTPANNPG 582


>gi|319939057|ref|ZP_08013421.1| asparaginyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319812107|gb|EFW08373.1| asparaginyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 448

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/310 (21%), Positives = 110/310 (35%), Gaps = 24/310 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
            + VG  V +  WV      G I FL +RD       V   P+             F I 
Sbjct: 12  KNHVGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFLEKFGEEEGLNKFNII 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + + G+V                 EL    IEI+  + + P+     +E+  
Sbjct: 72  KHLNQETAVLVKGIVKEDERSKF-------GYELDVTDIEIVGESNDYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                +R L LR       +  R  II +         FI+  +PIL+ ++ E + +   
Sbjct: 122 DFLMDHRHLWLRSRKQMAIMQIRNAIIYASYEFFDRNGFIKFDSPILSGNAAEDSTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E  
Sbjct: 182 TDYFGTPAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYP 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV  D+ L+  E  ++ + +   +    +   L    D   +        +    ++  +
Sbjct: 239 FVTHDESLDLQEAYVKALIQGVLDRAPHALEVLERDTDLLKKYVAEPFKRISYDEVIDLL 298

Query: 303 TEHFVHSEFR 312
            EH    E  
Sbjct: 299 QEHENDEEAE 308



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNEERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E +L      G++     + +       + G  PH G   G++R+V  
Sbjct: 371 EIIGGSAREESYEKLLAKIEENGLNP----DDYAFYLDLRKYGSVPHAGFGLGLERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +  + 
Sbjct: 427 VAGTKHIREAIPFPRMLHRIEP 448


>gi|260824982|ref|XP_002607446.1| hypothetical protein BRAFLDRAFT_276665 [Branchiostoma floridae]
 gi|229292793|gb|EEN63456.1| hypothetical protein BRAFLDRAFT_276665 [Branchiostoma floridae]
          Length = 593

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 74/349 (21%), Positives = 139/349 (39%), Gaps = 38/349 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DS 56
           +Y   + GD  ++DV   + ++G VH  R  G  +IF D+R      QV+AN      + 
Sbjct: 105 KYHHLNAGD-HLTDV--TLSVAGRVHAKRESGQKLIFYDLRAEAMKIQVMANARFYTSEE 161

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             F+I   +R   ++ + G                G++ +    I++LS      LP   
Sbjct: 162 EFFKINGRIRRGDIIGVIG---------NPGKTKKGELSIIPTSIQLLSPCL-HMLPHLH 211

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                +  R++ R+LDL   + +    + R RIIN +R  +    F+E  TP++   +  
Sbjct: 212 FGITNKETRYRQRYLDLIINEHVRDKFIIRARIINYVRRFLDELGFLEVETPMMNMDAGG 271

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                 V  R        +  AP+ Y ++L+  G DR ++I   FR+E       P EF 
Sbjct: 272 ATDKPFVTHRNELDMDLYMRVAPELYLKMLIVGGIDRVYEIGRLFRNEGIDLTHNP-EFT 330

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
             +  M++ + +D++   E++L G+ +  + G+                +Y  +  D  +
Sbjct: 331 TCEFYMAYADYNDLMKITESLLSGMVKHITGGSYK-------------IQYHPEGAD-SD 376

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            +   + T  F   +       L      ++ A        +R F D +
Sbjct: 377 EVWEADFTPPFRRLDMM---GDLEKELKVKLPAADTLHTEESRKFFDDL 422



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 4/95 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++L     EI +     +   V  + F      K   ++           + + 
Sbjct: 476 PGLTERFELFVMKKEICNAYTELNDPMVQRERFEQQAKDKAAGDDEAQLIDENFCTSLEY 535

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP  G   GIDR+ M L  + N++EV  FP  +
Sbjct: 536 GLPPTAGWGMGIDRLTMFLTDSNNIKEVLFFPAMR 570


>gi|32423704|gb|AAP81247.1| lysyl tRNA synthetase [Candidatus Portiera aleyrodidarum]
          Length = 496

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 13/247 (5%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           ++G + R R      F+ ++D     Q+  +  +   EI K ++   +  I G +     
Sbjct: 64  VAGRIMRKRGP----FIVVQDVSSNIQLYIDKKTISNEIHKDIKDWDIGDIIGAIGDIDK 119

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKN 141
             I      G++ L  +K  IL+ +    LP        + IR+++R+LDL  +  + K 
Sbjct: 120 SKI------GELYLLVKKAYILTKSIRH-LPSKFHGIKDQEIRYRHRYLDLIMNKEVRKT 172

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
              RTRII+++R       F+E  TPIL +               +      L  AP+ Y
Sbjct: 173 FKIRTRIISALRKFFYELYFLEAETPILHSMPGGAIAKPFETYNYSLNIKLYLRIAPELY 232

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+  GF+R F+I   FR+E   +   P EF  L+   +F    D++   E+++R V 
Sbjct: 233 LKRLVVGGFERVFEINKNFRNEGISTWHNP-EFTMLEFYWAFATYKDLMEITEHMIRFVA 291

Query: 262 EEFSNGN 268
            E     
Sbjct: 292 NEALGTT 298



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 52/140 (37%), Gaps = 23/140 (16%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           I+     +  ++ D+P                            +  D       +++L 
Sbjct: 371 IVERKLIKPTFVTDYP---------------------VEVSPLARSKDSNLNITERFELF 409

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE-NRFG-GLYRAFQCGMPPHGGIAAGI 543
             G EIA+G    +        F     +K   + + F     RA + GMPP  G   GI
Sbjct: 410 IGGREIANGFSELNDYIEQSNRFYLQLRNKYTYDLSYFDMDYIRALEYGMPPTAGEGVGI 469

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           DR+VM+L    ++R+V LFP
Sbjct: 470 DRLVMILTNKDSIRDVLLFP 489


>gi|118085208|ref|XP_417219.2| PREDICTED: similar to Asparaginyl-tRNA synthetase 2
           (mitochondrial)(putative) [Gallus gallus]
          Length = 478

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 106/258 (41%), Gaps = 20/258 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           LG  +    V++ GWV  VR    ++FL I D   +  +    D +     + +     +
Sbjct: 34  LGAQEEAGEVKVQGWVRSVRSQKEVLFLHINDGSSLESLQVVADPSLE--CRDLTFGSAV 91

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G ++    +  N       +EL A+ I ++   + L  P   +  +P     ++  L
Sbjct: 92  EVQGKLLKSPHKMQN-------MELRAEAIHVVGPCDTLSFPFKIKERHPLEYVRQFPHL 144

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR------ 185
             R + +   +  R+    ++        ++   TPI+T++  EGA D            
Sbjct: 145 RCRTNAVGALLRIRSEATAAIHSFFQDNGYVHIHTPIITSNDCEGAGDLFQIETSHEAKE 204

Query: 186 -VNQGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
              +  F+ +P       Q    +M+  F R F   P FR E+ +S R   EFY ++ E+
Sbjct: 205 AAEKNHFFNVPTFLTVSGQLHLEVMSGAFTRVFTFGPTFRAENSQSRRHLAEFYMVEAEL 264

Query: 242 SFVEQ-DDILNTMENVLR 258
           SF E   DI+  ME++ +
Sbjct: 265 SFTESLQDIMQVMEDLFK 282



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 65/194 (33%), Gaps = 36/194 (18%)

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K + I   EA+ +        +       P   C    +   ++ +  G +        +
Sbjct: 318 KFVTISYNEAVEILKQASQTFTF-----KPEWGCDLQTEHEKYLVKHCGEV------PVF 366

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGG 495
           ++++P           D    PF M                 A   DL+  G  E+  G 
Sbjct: 367 VINYP----------YDL--KPFYMRDNED------GPQRTVA-AVDLLVPGIGELCGGS 407

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           +R      +      +G++     + +       + G  PHGG   G +R +  +LG  N
Sbjct: 408 LREERLPFLESRLQRLGLA-----DTYQWYLDLRKFGSVPHGGFGMGFERYLQYILGVDN 462

Query: 556 VREVSLFPMSQNFC 569
           +++V  FP   + C
Sbjct: 463 IKDVIPFPRFPHSC 476


>gi|313247646|emb|CBY15807.1| unnamed protein product [Oikopleura dioica]
          Length = 594

 Score =  175 bits (444), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 108/264 (40%), Gaps = 9/264 (3%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +   D G  V  +G +H  R  G  ++F D+R      Q++AN     ++  +       
Sbjct: 124 VTHKDDG-EVSTAGRIHSFRASGAKLVFYDLRSEGEKIQIMAN--LGQYKDPEEFAKIIS 180

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               G ++             G++ +   ++++LS      LP   +    +  R++ R 
Sbjct: 181 EIRRGDIVGVKG--FPGKTKKGELSIMPTEMQVLSPCL-HMLPKLHDGLKDKETRYRKRH 237

Query: 131 LDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDL  +  +    + R +II  +R  +    F+E  TP++   +             +  
Sbjct: 238 LDLIMNADVRHKFIARAQIIQYLRTYLANNGFLEVETPMMNMIAGGATAKPFKTFHNDLS 297

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               +  AP+ Y ++L+  G+DR F+I   FR+E       P EF   +  M++ + DD+
Sbjct: 298 MDLFMRVAPELYLKMLVVGGYDRVFEIGKNFRNEGIDMTHNP-EFTACEFYMAYADADDL 356

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN 273
           +   E +L G+ +  +    V  +
Sbjct: 357 MKITEELLSGMVKAITGDYKVKYH 380



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 13/116 (11%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQ 530
                 +++L     EIA+     +  +V    FS     K    E  +       +A +
Sbjct: 485 APGLTERFELFVFKKEIANAYTELNDPKVQRDRFSQQMADKAAGDEEAQGYDENYCQALE 544

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            G+PP GG   G+DR+ M L  + N++EV LFP  +         P   + +   E
Sbjct: 545 YGLPPTGGWGLGVDRLTMFLTDSNNIKEVILFPAMK---------PEETNEKSAEE 591


>gi|256372660|ref|YP_003110484.1| lysyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256009244|gb|ACU54811.1| lysyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 498

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/271 (23%), Positives = 114/271 (42%), Gaps = 16/271 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSEWVLCIDG 75
              VR++G + R+R  G + F ++RD  G  Q+    D       +A S+     + +DG
Sbjct: 46  DQQVRVAGRILRLRRQGRMAFGELRDASGAIQLWLRADRTQAFSTLADSLVLGDWVGVDG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           ++         A   TG+  +   +I++L+ A                +R++ R++DL  
Sbjct: 106 VI---------ATTRTGERSVLVDRIQLLAHARRSFGD-KWRGVRDPDVRYRQRYVDLWA 155

Query: 136 DT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           +  + +  + R+R++ ++R  + A  F+E  TPIL   +S   AR F+          Y 
Sbjct: 156 NPGVRERFLARSRLVRALRDELDARGFVEVETPILQPIASGAAARPFVTHHNALDMDLY- 214

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  G +R F++   FR+E   S R   EF  L+   ++ + D +    
Sbjct: 215 LRIAPELYLKRLVVGGIERVFELGRDFRNEGI-SPRHNPEFTMLEAYQAYGDIDAMRELT 273

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           E +L              N    I      R
Sbjct: 274 EGLLASAARAVFGSTRGENELGVIDLTPPFR 304



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 78/208 (37%), Gaps = 30/208 (14%)

Query: 363 LDESGNVAGMGPV-AKHLNIVNTEAIRVRLDMQDGDSCFFIAG--DPLKFCSFAADARNH 419
            +E G +    P  A  +  + +EA+  R+ + +      +A   D       A  A   
Sbjct: 291 ENELGVIDLTPPFRAATMEDLVSEAVGERVSLDEPARLLDLARRFDLAVLEPEAGRALVA 350

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + +EL  +     E  +++DFP     E    +   H                     + 
Sbjct: 351 LYEEL--VEPRLIEPTFVLDFP-----ESVSPLARRHR----------------SRPGRV 387

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPP 535
            +++LV  G E+ +     +  +     F      +               RA + G+PP
Sbjct: 388 ERFELVVGGRELVNAFSELNDPDEQRARFEEQARQRRAGDDEAMAYDADYVRALEYGLPP 447

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG+  G+DR+ MLL G ++++EV LFP
Sbjct: 448 TGGLGLGVDRLAMLLTGQRHIKEVILFP 475


>gi|327310573|ref|YP_004337470.1| asparaginyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947052|gb|AEA12158.1| asparaginyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 431

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/295 (20%), Positives = 109/295 (36%), Gaps = 26/295 (8%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V + GWV+R R     IF+ +RD  GI Q+V    +  F +A+ +  E  L   GL+  
Sbjct: 18  TVTVRGWVYRKRELKDKIFIVLRDSTGILQLVFARGTEAFNVAQRLNLESSLVATGLIKE 77

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                       G  EL  Q ++        P+     +          R L LR   + 
Sbjct: 78  EPR-------APGGKELHVQSVDWYYEGAPYPINEDAAQ-ADSEYLLDVRHLWLRSRKMQ 129

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             +  R  +  ++     +  + E   P+   ++ EG          +      L Q+ Q
Sbjct: 130 AVLKIRHTVFGAIHEYFRSRGYYEVQGPMFITAAVEGGATLFKVPYFD--DVVYLTQSSQ 187

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y +  + S  ++ + IAP FR E  R+ R   EF+  + EM++   DD++   E ++  
Sbjct: 188 FYLEAFIFS-LEKVYTIAPSFRAEPSRTRRHLTEFWHAEAEMAWYHLDDLMKVNEELISH 246

Query: 260 VFEEFSNG---------------NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           +  +                     V   F R+ YD+A+        D++    +
Sbjct: 247 IVSKVLEERLDELKLLGRKTEPLEAVKPPFYRVSYDEAVDILKAKGVDIKWGDDL 301



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R +  + ++      G++ +  +          + G  PH G   G+DR+VM + G  ++
Sbjct: 361 RIYDEKELVSKIERFGLNPKDYQ----WYIDLRRYGSVPHSGFGLGVDRVVMWIAGLDHI 416

Query: 557 REVSLFPMS 565
           R+   FP  
Sbjct: 417 RDAVPFPRD 425


>gi|198431081|ref|XP_002128269.1| PREDICTED: similar to asparaginyl-tRNA synthetase [Ciona
           intestinalis]
          Length = 559

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 59/297 (19%), Positives = 116/297 (39%), Gaps = 21/297 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            +  G  V+++GW HR+R  G  ++F+ +RD  G  Q V N        A  + +E  +C
Sbjct: 132 TAHRGQRVKVNGWSHRIRRQGKTLMFIVLRDGSGYLQAVLNDQLCQTYNAVMLSTESTVC 191

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G++              G  EL     E++ +A    +     +E    +    R L 
Sbjct: 192 LYGVITPVMEG----KSAPGGHELICDYWELIGLAPPGGIDTVLNQEADVDVMLDNRHLV 247

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +   K +  R+ ++ + R       + E + P L  +  EG           + ++ 
Sbjct: 248 IRGEQTSKILRVRSYLMQAFRDHYFERGYYEVTPPCLVQTQCEGGSTLFKLDFFGEQAY- 306

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  + S     F +A  +R E  R+ R   E+  ++ E +F+  +D+L+ 
Sbjct: 307 -LTQSSQLYLETCLPS-LGDVFCLAESYRAEQSRTRRHLAEYTHVEAECAFITFNDLLDR 364

Query: 253 MENVLRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +E+++  V ++                       F R+ Y +AI           + 
Sbjct: 365 LEDLICDVVDKLLKSPAGELIKDLNPGFVAPKRPFRRMDYAEAIVYLKEHDIKKEDG 421



 Score = 64.3 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R    E +L+ + + G+      +++       + G   HGG   G+
Sbjct: 476 LMPNVGEIVGGSMRMDNHEELLEGYKSEGVDP----SKYYWYTDQRKFGTCEHGGYGLGL 531

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R++  L    ++R+V L+P     C  
Sbjct: 532 ERLLTWLTDRYHIRDVCLYPRFLERCCP 559


>gi|126134255|ref|XP_001383652.1| aspartyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|126095801|gb|ABN65623.1| aspartyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 573

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/290 (22%), Positives = 118/290 (40%), Gaps = 28/290 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDS---------ACFE 60
           DL  ++ G  V     VH  R  G  ++FL +R    + Q +   +             +
Sbjct: 112 DLSAANDGEQVIFRARVHNSRQQGATMLFLTLRQQSELIQTLFKTNKETDSNAISKQMVK 171

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A S+  E ++ + G V        ++ +    +E+   KI  +S   E    +  +   
Sbjct: 172 WASSINLESIVVVHGTVKKVDELIKSSTV--QDVEIHVSKIYTISETPEQLPLLIEDASR 229

Query: 121 PE-------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
            E               R   R +DLR  T       ++ +    R  +    F E  TP
Sbjct: 230 SEAEAEALKLPIVNLDTRLDARVIDLRTPTNQAIFKIQSGVCALFREFLAGRGFTEIHTP 289

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            + A++ EG  +    +     +F A  Q+PQ YKQ L+A+ F++ +++AP FR E+  +
Sbjct: 290 KIIAAASEGGSNVFQINYFKGSAFLA--QSPQLYKQQLIAADFEKVYEVAPVFRAENSNT 347

Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            R   EF  LD+EM+F E   ++L+ + ++   +F E           +R
Sbjct: 348 HRHMTEFMGLDLEMAFEEHYHEVLDILADLFVFIFTELKKRYAKEIATVR 397


>gi|54013883|dbj|BAD55253.1| putative lysyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 488

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 59/273 (21%), Positives = 113/273 (41%), Gaps = 20/273 (7%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPD 55
           RTHS  ++  +          G  V ++G V  +R  G + F  +++  G   Q + + +
Sbjct: 25  RTHSLAEIRAAHPDLAPDTQTGQQVGVAGRVIFLRNTGKLCFATLQEGDGTKLQAMISLN 84

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               +   + +++  L   G  +    E I +   TG++ + A    +   A+ L     
Sbjct: 85  GVGADALAAWKADVDL---GDFVFVHGEVIASR--TGELSVMADSWSM--AAKSLRPLPV 137

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL  R    +    R  ++ ++R  +    F+E  TP+L     
Sbjct: 138 AHKEMNEESRVRQRYVDLIVRPEARQMARTRVAVVRALRNALERRGFLEVETPMLQTLHG 197

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  G ++ F+I   FR+E   S   P E
Sbjct: 198 GAAARPFVTHSNALDMDLY-LRIAPELFLKRCVVGGLEKVFEINRNFRNEGADSTHSP-E 255

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           F  L+   ++   DD    +  +++ V +E   
Sbjct: 256 FAMLETYEAYGTYDDSATMIRELIQEVAQEALG 288



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 62/194 (31%), Gaps = 38/194 (19%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           PV     +    AI  R+ ++  +   +  G               + +         + 
Sbjct: 322 PVTPETTVEELRAIAARVGLEIPEEKGYGHGK----------LVEELWEH--QYGDKLYA 369

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             ++ DFP               +P T                    ++DL   GFE+A+
Sbjct: 370 PTFVRDFP------------VETSPLTRQHRS---------KPGVTEKWDLYVRGFELAT 408

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVML 549
           G        +  + F +        ++           A + GMPP  G   GIDR++M 
Sbjct: 409 GYSELVDPVIQRERFVDQARLAAQGDDEAMVLDEDFLAAMEHGMPPTTGTGMGIDRLLMA 468

Query: 550 LLGAKNVREVSLFP 563
           L G   +RE  LFP
Sbjct: 469 LTGLG-IRETILFP 481


>gi|50302869|ref|XP_451372.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640503|emb|CAH02960.1| KLLA0A08426p [Kluyveromyces lactis]
          Length = 554

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 72/343 (20%), Positives = 123/343 (35%), Gaps = 24/343 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V   V++SGWVHR+R +  ++F+ +RD  G  Q V   D A      ++  E  + + G 
Sbjct: 128 VDKRVKVSGWVHRLRNNKSVVFIILRDGTGFLQTVLTGDLARSYQIVNLTLETTITLYGT 187

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREYPESIRFKYRFLDLR 134
           +         +    G +EL     EI+  A           +     SI    R L LR
Sbjct: 188 IKVVPE----SKSAPGGVELFVDYFEIVGPAPSGENAFTNRVQENADPSILLDQRHLMLR 243

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +TL   +  R  ++ S+R     E   E + P +  +  EG           + +F  L
Sbjct: 244 GETLSAVMKVRAALMKSIRRVYDEEGLTEVNPPCMVQTQVEGGSTLFKLDYYGEEAF--L 301

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y +  +A      + I   FR E   + R   E+  ++ E+ F++ DD+L+ +E
Sbjct: 302 TQSSQLYLETCLA-ALGDVYCIQESFRAEKSHTRRHLSEYTHIEAELCFLDFDDLLSHIE 360

Query: 255 NVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            V+    +                 N       F R+ Y DAI                 
Sbjct: 361 RVITKTIQYVLEDPVAGPLVKKLNPNFQAPQLPFKRMEYKDAIEWLKEHGIKNEEDKEFQ 420

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
              +    +  R  +  + V      + +  K     R   D+
Sbjct: 421 -FGDDIAEAAERKMTDTIGVPILLTRFPLEIKSFYMKRCDDDK 462



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 41/121 (33%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+    EI  G +R   +E ++  F  
Sbjct: 445 RFPLEIKSFYMKRCDDDKRVTESVDV-------LMPTVGEITGGSMRIDDTEELMAGFKR 497

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G +RI+  L     VR+ SL+P     C 
Sbjct: 498 EGIDPAP----YYWFIDQRKYGTCPHGGYGLGTERILAWLCDRFTVRDCSLYPRFSGRCK 553

Query: 571 L 571
            
Sbjct: 554 P 554


>gi|311087773|gb|ADP67852.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 466

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 57/291 (19%), Positives = 108/291 (37%), Gaps = 24/291 (8%)

Query: 6   THSCGDLGVSD--VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIA 62
           T S  D+   D  V S + + GWV   R    G  F+ I D      +    ++      
Sbjct: 3   TVSISDIYKDDIIVNSVITVCGWVRNRRSSKSGFSFITIYDGSCFNSIQVIANNTLPNYY 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +    +    G  +  S + I +     + E+  +KI++L   E         +++  
Sbjct: 63  KEI----LHLTTGCSVMLSGKLILSIGDKQKYEIQLKKIKVLGWVENPETYPISSKKHST 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
               +   L  R + +      R  I++S+      E +    TPI+T+ + EGA +   
Sbjct: 119 EYLREVAHLRSRTNLIGAIARIRNYILHSLHHFFYKEKYYWVPTPIITSLNTEGAGEMFR 178

Query: 183 PSRVNQGSFYALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDP 225
            S ++  +      +   +K+                    A    + +   P FR E+ 
Sbjct: 179 VSTLDMENIPKNLDSSVDFKKDFFGKESFLTVSGQLNLETYACSLSKVYTFGPTFRAENS 238

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            + R   EF+ L++E +F + +DI +  E +L+ V +          NFL 
Sbjct: 239 NTGRHLAEFWMLEVESAFTDLNDISDFAECMLKYVCKSLLKKCITDINFLE 289



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV N  E+  G  R     ++ +    +G+ K      +       + G  PH G   G 
Sbjct: 383 LVPNVGELIGGSQREERIAILDERLLELGLKK----EDYWWYRDLRRYGTVPHSGFGMGF 438

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R++    G  N+R++  FP + N
Sbjct: 439 ERLISYFTGITNIRDLIPFPRTVN 462


>gi|256419549|ref|YP_003120202.1| lysyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256034457|gb|ACU58001.1| lysyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 504

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/285 (21%), Positives = 114/285 (40%), Gaps = 19/285 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             + L+G +  VR  G   F+ ++DH    Q+    D  C    K++       +  L  
Sbjct: 53  QDICLAGRIMAVRDMGKAAFVKLQDHTTQMQLYIRRDDICNGDDKTMFDVVFKKLLDLGD 112

Query: 79  SRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREY-----PESIRFKYRFLD 132
               +       TG++ +   K+++L+ +   LP+    E E          +++ R++D
Sbjct: 113 IIGVKGYAFITKTGELSIHVTKLDVLAKSIRPLPVVREKEGEVFDAVTDPEFKYRQRYVD 172

Query: 133 LRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   K   +KRTRI+ ++R       ++E  TPIL        AR F          
Sbjct: 173 LIVNPQVKEVFIKRTRIMQTIRDFYNDLGYLEVETPILQPIPGGATARPFTTHHNALDIP 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y +  A + Y + L+  GF+  ++ A  FR+E       P EF  ++M  ++ + + ++
Sbjct: 233 LY-MRIANELYLKRLIVGGFEGVYEFAKDFRNEGMDRTHNP-EFTVMEMYAAYKDYEWMM 290

Query: 251 NTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY 286
           +T E +L  +                      F R+   +AI  +
Sbjct: 291 DTTETLLEKIAIALHGTTEVTVGEKVINFKAPFRRVTMYEAILEH 335



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+A+     +        F
Sbjct: 378 EHHYVQPTFITDYPVEMSPLTKKHRSKPGLVERFELMVNGKELANAYSELNDPIDQRARF 437

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +     E  ++          RA + GMPP  GI  GIDR+ M++    ++++V  FP 
Sbjct: 438 EDQVKLMERGDDEAMYIDYDFLRALEYGMPPTSGIGIGIDRLTMIMTNQPSIQDVLFFPQ 497

Query: 565 SQ 566
            +
Sbjct: 498 MK 499


>gi|197335346|ref|YP_002155960.1| asparaginyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|197316836|gb|ACH66283.1| asparaginyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 466

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 70/389 (17%), Positives = 131/389 (33%), Gaps = 58/389 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVL 71
           V S V + GW+   R    GI FL + D      + A    + ++   E+ K      V 
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAVYDGSCFDPIQAVVPNDLNNYNDEVLKLTTGCSV- 74

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +++  A+           EL+A +++++   E+       +  +      +   L
Sbjct: 75  EVTGTIVASPAKG-------QDFELAATEVKVVGWVEDADTYPMAKTRHSIEYLREVAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---- 187
             R + +      R  +  ++      + +   S P++TAS  EGA +    S ++    
Sbjct: 128 RPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWMSAPLITASDAEGAGEMFRVSTLDHANL 187

Query: 188 ----------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PLDDKGNVDYDKDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSHTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNN 273
           + ++ E++F   DD+    E++L+ VFE                            VS++
Sbjct: 248 WMVEPEVAFATLDDVAKLAEDMLKYVFEAVLAERRDDLEFFASRIDKQAITRLEQFVSSD 307

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           F ++ Y DAI+       D    +   +   +EH  +     F   + V    +      
Sbjct: 308 FAQVDYTDAIQILKDSGRDFEFDVEWGIDMSSEHERYLAEEHFKAPVIVKNYPKDI---- 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 364 -KAFYMRQNDDGKTVAAMDVLAPGIGEII 391



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 6/102 (5%)

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           ++ ND     A   D++  G  EI  G  R    +++      +GI              
Sbjct: 368 MRQNDDGKTVA-AMDVLAPGIGEIIGGSQREERLDILDARMIEMGIDP----EHMSWYRD 422

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 423 LRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|237874247|ref|NP_001153873.1| aspartyl-tRNA synthetase [Acyrthosiphon pisum]
          Length = 537

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 67/315 (21%), Positives = 126/315 (40%), Gaps = 29/315 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDI-RDHYGITQVVANPDSACFEIAK---SVRSEWVLCIDGL 76
           V + G +H  R  G   F+ + +  + I  +    D+   +  K   ++  E ++ I G 
Sbjct: 93  VWIRGRLHTSRAKGKQCFMVVRQQQWSIQVLAVVSDTISKQFVKFCSNINKESIVDIKGK 152

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA--------EELPLPVFGERE--------Y 120
           V    ++    +     +EL  +++ ++S +        E+   PV G+ +         
Sbjct: 153 VTRTPSKI--GSCSQQDVELHIEELWVVSQSANQLPLLIEDASRPVKGDDDEDQGLNIKV 210

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            +  R   R +DLR             +    R  + A+ F+E  TP +  ++ EG  + 
Sbjct: 211 NQDTRLDNRVIDLRTPANQAIFRLEAGVCKIFRDLLTAKGFVEIHTPKMINAASEGGANV 270

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              S     ++ A  Q+PQ YKQ+ +A  FDR F I   FR ED  + R   EF  LD+E
Sbjct: 271 FTISYFKGSAYLA--QSPQLYKQMAIAGDFDRVFTIGAVFRAEDSNTYRHLTEFVGLDLE 328

Query: 241 MSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP--DLRNPI 297
           M+F     ++++ + ++   +F+   +          IC    +  +    P   L  P 
Sbjct: 329 MAFKYHYHEVVDVIGSLFTNIFKGLRDNYQSEIKT--ICEQYPVEPFKFLDPPLKLEFPT 386

Query: 298 IMHNVTEHFVHSEFR 312
            ++ + E  V     
Sbjct: 387 AVNMLREAGVEMGDE 401



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                 + +  YD+   G EI SG  R H  + +++   +
Sbjct: 429 KFPLAIRPFYTMPDPD--------SKVASNSYDMFMRGEEILSGAQRIHDFDYLIERAKH 480

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             +       +      AF+ G PPH G   G++R+VML LG  N+R+VS+FP       
Sbjct: 481 HQVDI----EKIAAYIDAFRYGCPPHAGGGIGLERVVMLYLGLDNIRKVSMFPRDPKRLT 536

Query: 571 L 571
            
Sbjct: 537 P 537


>gi|317176998|dbj|BAJ54787.1| lysyl-tRNA synthetase [Helicobacter pylori F16]
 gi|317179421|dbj|BAJ57209.1| lysyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 501

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 20/297 (6%)

Query: 8   SCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
              DL    D      + G V  +R  G   F+ I D   I Q   + +    E  KS++
Sbjct: 44  YVKDLEEPKDKEKCESIVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDE-FKSLK 102

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L +  +V+    +       TG++ + A +  ILS    +PLP          +R+
Sbjct: 103 KH--LEVGDIVL---VKGFPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRY 156

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+LDL  +   K++ K R+ I++S+R     E F+E  TP++        AR F+   
Sbjct: 157 RQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFETEGFLEVETPMMHPIPGGANARPFITYH 216

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              +   Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++ 
Sbjct: 217 NALEIERY-LRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYH 274

Query: 245 EQDDILNTMENVLRGVFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
             +D++   + +   + +          ++     N    I Y DA+   G    D+
Sbjct: 275 TYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVISYLDALETIGGISKDI 331



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL GAK++++V LFP
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|297379407|gb|ADI34294.1| lysyl-tRNA synthetase [Helicobacter pylori v225d]
 gi|308063046|gb|ADO04933.1| lysyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 501

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 20/297 (6%)

Query: 8   SCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
              DL    D      + G V  +R  G   F+ I D   I Q   + +    E  KS++
Sbjct: 44  YVKDLEEPKDKEKCESIVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDE-FKSLK 102

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L +  +V+    +       TG++ + A +  ILS    +PLP          +R+
Sbjct: 103 KH--LEVGDIVL---VKGFPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRY 156

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+LDL  +   K++ K R+ I++S+R     E F+E  TP++        AR F+   
Sbjct: 157 RQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYH 216

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              +   Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++ 
Sbjct: 217 NALEIERY-LRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYH 274

Query: 245 EQDDILNTMENVLRGVFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
             +D++   + +   + +          ++     N    I Y DA+   G    D+
Sbjct: 275 TYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVISYLDALETIGGISKDI 331



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL GAK++++V LFP
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|257125882|ref|YP_003163996.1| asparaginyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049821|gb|ACV39005.1| asparaginyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 479

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 131/376 (34%), Gaps = 61/376 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWV 70
               +G  + ++GWV ++R      F+++ D   +   QVV       FE    +     
Sbjct: 29  TKEYLGKEIEINGWVKKIRSQKNFGFIELNDGTFFTGIQVVFEEGLENFEEISKLTISTS 88

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G+V+    +           E+ A KI +   A+    P+  +R   E +R     
Sbjct: 89  VKVTGIVVESVGKGQA-------YEIKATKISVYQKADSDY-PLQNKRHSFEFLR-TIAH 139

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--- 187
           L  R +        R+ +  ++      +NF+   TPI+T S  EGA +    + ++   
Sbjct: 140 LRPRTNAFFATFRVRSILSYAIHKFFQEKNFVYVQTPIITGSDAEGAGEMFRLTTLDINN 199

Query: 188 -----------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                      +  F+   A      Q      A+ F   +   P FR E   + +   E
Sbjct: 200 IPKTENGSIDFKQDFFGKEANLTVSGQLNVETFATAFKNTYTFGPTFRAEKSNTPKHAAE 259

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F + D  ++ +E +++ +             F                   
Sbjct: 260 FWMMEPEIAFADLDVNMDVIEEMIKYIVNYVRENAKEEMEFFNKFVDKDLFNRLDTLVNN 319

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              RI Y +AI      K      +   +   TEH  +   + F K + V    +     
Sbjct: 320 EFGRITYTEAIEILKNSKQKFEYEVEWGIDLQTEHERYLAEKHFKKPVFVTDYPKDI--- 376

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  ++NE
Sbjct: 377 -------KAFYMKLNE 385



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 78/219 (35%), Gaps = 33/219 (15%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           + YI   + E+          K ++      +   ++ + G   +  A + LK      +
Sbjct: 283 IKYIVNYVRENAKEEMEF-FNKFVDKDLFNRLDTLVNNEFGRITYTEAIEILKNSKQKFE 341

Query: 416 ARNHIAQELG------IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
                  +L       +   +  +  ++ D+P        K I      F M        
Sbjct: 342 YEVEWGIDLQTEHERYLAEKHFKKPVFVTDYP--------KDIKA----FYMK------- 382

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  +++A   DL+  G  EI  G  R    E++L   + +G+     E  +      
Sbjct: 383 LNEDGKTVRAV--DLLAPGIGEIVGGSQREDDYEILLGKINEMGLK----EEDYWWYLDL 436

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G DR++M + G  N+R+V  FP +  
Sbjct: 437 RKYGSVPHSGFGLGFDRMLMYITGMTNIRDVIPFPRTTK 475


>gi|119719757|ref|YP_920252.1| asparaginyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524877|gb|ABL78249.1| asparaginyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 430

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 70/298 (23%), Positives = 122/298 (40%), Gaps = 28/298 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            GS V + GWV+R R  G   F+ +RD  GI Q V  P+S    +A+ V  E  + + G 
Sbjct: 16  AGSQVTVRGWVYRRRDLGDKAFVVVRDSTGIIQAVFTPESPGHALARKVTVESSVIVGGA 75

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  E++ + IEI+ +AE  P+     R+       + R L +R  
Sbjct: 76  LREDPR-------APGGKEIAGRNIEIVGLAENFPIR----RDASREFLLEVRHLAVRSR 124

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +   +  R+ +  ++     +  F E   P+  +++ EG         V+ GS   L Q
Sbjct: 125 KMTAVLKLRSTVFEALHEWFRSNGFYEVHCPMFISAAVEGGATLFPVKYVD-GSTVYLTQ 183

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y + L+ S  ++ + +AP FR E  R+ R   EF+  + E+++   + IL   E +
Sbjct: 184 SSQFYLEALIYS-LEKVYTVAPSFRAEKSRTRRHLTEFWHAEAEVAWTGLEGILKVEEEL 242

Query: 257 LRGVFEEFSNGNTV---------------SNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           +  +       N                    F RI YD AI        +++    +
Sbjct: 243 VSHIVRRVLEKNREELELLGRNLEPLKNVEPPFPRISYDKAIEILQGKGLNVKWGDDL 300



 Score = 63.9 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 43/153 (28%), Gaps = 21/153 (13%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
                   +LG          +  D PF+ +             F          K +  
Sbjct: 291 GLNVKWGDDLGADEERALTEEF--DKPFFLY-----GFPVGVKAFYH--------KNDPS 335

Query: 475 LSIKAFQYDLVCNGFEIASGGI--RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                   DL+         G   R    E +L      G++    E          + G
Sbjct: 336 RPEVTLSADLLAPEGYGEIIGGGERIEKLEELLDKIKQFGLNPSDYE----WYLDLRRYG 391

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             PH G   G+DR+V  + G  ++ +   FP +
Sbjct: 392 TVPHAGFGLGMDRLVTWIAGLDHIVDSIPFPRT 424


>gi|59711766|ref|YP_204542.1| asparaginyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|75354119|sp|Q5E5P2|SYN_VIBF1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|59479867|gb|AAW85654.1| asparaginyl tRNA synthetase [Vibrio fischeri ES114]
          Length = 466

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 70/389 (17%), Positives = 131/389 (33%), Gaps = 58/389 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVL 71
           V S V + GW+   R    GI FL + D      + A    + ++   E+ K      V 
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAVYDGSCFDPIQAVVPNDLNNYNDEVLKLTTGCSV- 74

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +++  A+           EL+A +++++   E+       +  +      +   L
Sbjct: 75  EVTGTIVASPAKG-------QDFELAATEVKVVGWVEDAETYPMAKTRHSIEYLREVAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---- 187
             R + +      R  +  ++      + +   S P++TAS  EGA +    S ++    
Sbjct: 128 RPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWMSAPLITASDAEGAGEMFRVSTLDHANL 187

Query: 188 ----------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PLDDKGNVDYDKDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSHTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNN 273
           + ++ E++F   DD+    E++L+ VFE                            VS++
Sbjct: 248 WMVEPEVAFATLDDVAKLAEDMLKYVFEAVLAERRDDLEFFASRIDKQAITRLEQFVSSD 307

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           F ++ Y DAI+       D    +   +   +EH  +     F   + V    +      
Sbjct: 308 FAQVDYTDAIQILKDSGRDFEFDVEWGIDMSSEHERYLAEEHFKAPVIVKNYPKDI---- 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 364 -KAFYMRQNDDGKTVAAMDVLAPGIGEII 391



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 6/102 (5%)

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           ++ ND     A   D++  G  EI  G  R    +++      +GI              
Sbjct: 368 MRQNDDGKTVA-AMDVLAPGIGEIIGGSQREERLDILDARMIEMGIDP----EHMSWYRD 422

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 423 LRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|253701972|ref|YP_003023161.1| asparaginyl-tRNA synthetase [Geobacter sp. M21]
 gi|251776822|gb|ACT19403.1| asparaginyl-tRNA synthetase [Geobacter sp. M21]
          Length = 461

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/380 (19%), Positives = 134/380 (35%), Gaps = 56/380 (14%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L     G  + L GW   VR   G+ F+ + D   +   QVVA P+ A +   
Sbjct: 4   RTRVKQALSEGRPGETLLLKGWARTVRTGKGVTFISLNDGSTLAGIQVVAEPELANYAEV 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++ +   + + G++    A          ++EL A  +E++  A++   P+  +R   E
Sbjct: 64  AALGTGSAITVTGVLQESPAAG-------QELELKALSVEVVGAADQ-EYPMQKKRHSFE 115

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R     + +R +T       R+ +   +        F+   TPI+TA+  EGA +   
Sbjct: 116 YLR-TIAHMRVRSNTFGAVFRVRSALAQEVHRFFAERGFLYVHTPIITANDCEGAGELFR 174

Query: 183 PSRVNQG-------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
            + ++                F+A         Q +  L A  F   +   P FR E+  
Sbjct: 175 VTTLDLNNPPRVEGEIDFAQDFFAKATGLTVSGQLEGELFAQAFSDIYTFGPTFRAENSN 234

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL----------- 275
           + R   EF+ ++ EM+F +  D  +  E  L+ +     +       F            
Sbjct: 235 TARHAAEFWMIEPEMAFADLSDDADLAEAFLKRLCRFALDNCDEDMRFFNTQIDKGLIER 294

Query: 276 ----------RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
                     R+ Y +AI R        + P+   +   +EH  +   +V      V   
Sbjct: 295 IEGVAQASFARMDYGEAIERLKKAPVSFQFPVEWGLDLQSEHERYLTEQV------VGGP 348

Query: 324 YEVWAIPAKGGGGNRAFCDR 343
             +   P +         D 
Sbjct: 349 VFIMNYPKEIKAFYMRLNDD 368



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 76/220 (34%), Gaps = 16/220 (7%)

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG------DPLKFCSFA 413
           FW ++     A +   A           R  LD  D D  FF         + ++  + A
Sbjct: 242 FWMIEPEMAFADLSDDADLAEAFLKRLCRFALDNCDEDMRFFNTQIDKGLIERIEGVAQA 301

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID---FAHNPFTMPQGGMES-- 468
           + AR    + +  +      F + +++     +E E+ +         F M         
Sbjct: 302 SFARMDYGEAIERLKKAPVSFQFPVEWGLDLQSEHERYLTEQVVGGPVFIMNYPKEIKAF 361

Query: 469 -LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
            ++ ND     A    LV    EI  G  R    E ++     VGI              
Sbjct: 362 YMRLNDDGRTVAAMDLLVPKVGEIIGGSQREERLEPLIGRMKEVGIDP----ESLSWYLD 417

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             + G  PH G   G +R++M L G +N+R+V  FP +  
Sbjct: 418 TRRWGSTPHAGFGLGFERLIMYLTGMENIRDVIPFPRTPR 457


>gi|268562070|ref|XP_002646595.1| C. briggsae CBR-NRS-1 protein [Caenorhabditis briggsae]
          Length = 551

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/354 (18%), Positives = 126/354 (35%), Gaps = 24/354 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAK 63
           +T   G    +     V +  WVHR+R  G  ++FL +RD YG  Q V N        A 
Sbjct: 115 KTIKIGQ-ATAHRDQRVTIKAWVHRLRRQGKSLMFLILRDGYGFLQCVLNDKLCQSYDAV 173

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++ +E  + + G++ +      N        EL+    E++  +    +     ++    
Sbjct: 174 TLSTESSVQVYGVIRAVP----NGKDAPDGHELTVDYWELIGGSPAGGIDNVLNKDAGVD 229

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +    R L +R +   + +  R     +MR    A ++ E + P L  +  EG       
Sbjct: 230 VMLDNRHLVIRGENASRILRIRAAATRAMRDHFFAASYTEVAPPTLVQTQVEGGSTLFGL 289

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++  L Q+ Q Y +   A      + IA  +R E  R+ R   E+  ++ E +F
Sbjct: 290 DYYGEPAY--LTQSSQLYLETCNA-ALGDVYCIAQSYRAEKSRTRRHLSEYQHVEAECAF 346

Query: 244 VEQDDILNTMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTD 289
           +  D +++ +E+++    +                         F R+ Y +AI     +
Sbjct: 347 ITFDQLMDRIESLVCDTVDRLLADPVTAGLIQFVNPGYTAPVRPFRRMQYKEAIAWLQEN 406

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
                N        E    +  R  +  + V      +    K     R   D+
Sbjct: 407 DVRNENGEKFV-YGEDIAEAAERKMTDTIGVPILLNRFPAGIKAFYMPRCEDDK 459



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAF 508
            +       F MP+   +               DL+  G  EI  G +R    + ML AF
Sbjct: 441 NRFPAGIKAFYMPRCEDD--------KDLTESVDLLMPGVGEIVGGSMRIWKEDEMLAAF 492

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              G+S       +       + G  PHGG   G++R +  L G  ++R+V L+P 
Sbjct: 493 ERAGLSPT----NYFWYMDQRKYGSVPHGGYGLGLERFICWLTGTNHIRDVCLYPR 544


>gi|206895765|ref|YP_002246946.1| asparaginyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738382|gb|ACI17460.1| asparaginyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
          Length = 428

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 74/320 (23%), Positives = 115/320 (35%), Gaps = 33/320 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEWVL 71
              G  V L GW+H  R  G IIF+ +RD  G  QVV   +      +E AK    E  +
Sbjct: 9   KHEGEQVELRGWIHTKREKGKIIFIVMRDGSGFMQVVLEQERLKPDQWEQAKEASLESSI 68

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G+  S            G  E+ A   E   + ++ PL   G +E+      + R L
Sbjct: 69  VVKGVAKSEPR-------APGGYEIHADHFEAFHITKDWPL---GRKEHGIEFLEENRHL 118

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R       +  R  I N+M   +    F    TPI+T ++ EG            G  
Sbjct: 119 WIRSRKQSAILRIRHTIENAMIDFLNENGFYRFDTPIITTAAAEGTTTLFEVDY--HGDK 176

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y     A    + +   P FR E  ++ R   EF+ ++ E ++ E +D L 
Sbjct: 177 AYLSQSGQLY-AEAGALALGKVYTFGPTFRAEKSKTRRHLLEFWMIEPEAAWFEYEDNLQ 235

Query: 252 TMENVLRGVFEEFSNGNTV---------------SNNFLRICYDDAIRRYGTDKPDLRNP 296
             E  +  + +     N                    F RI Y +A+     +  D+   
Sbjct: 236 LQEQFVSYIVKRVLEENEDDLAILERPLEPLMKVEPPFPRITYTEAVDLLNKNGFDITWG 295

Query: 297 IIMH--NVTEHFVHSEFRVF 314
             +     T      E  VF
Sbjct: 296 DDLGAPEETFLSNQYEKPVF 315



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 60/155 (38%), Gaps = 23/155 (14%)

Query: 422 QELGIINCNCFEFCWIMD--FP--FYEWNEEEKKIDFAHNP-----FTMPQGGMESLKGN 472
           + + ++N N F+  W  D   P   +  N+ EK +   H P     F M           
Sbjct: 280 EAVDLLNKNGFDITWGDDLGAPEETFLSNQYEKPVFLTHFPAKIKAFYMQPD------PE 333

Query: 473 DLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           +   + A   DL+      EI  G  R H  +++LQ     G++    E  +       +
Sbjct: 334 NPEVVLAA--DLLAPEGYGEIIGGSQRIHDYDLLLQKIREFGLN----EEYYQWYLDLRR 387

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G  PH G   G++R V  +   +++RE   FP  
Sbjct: 388 YGSVPHSGFGIGLERTVAWICKLEHIRETIPFPRM 422


>gi|109946976|ref|YP_664204.1| lysyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123066312|sp|Q17YS1|SYK_HELAH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|109714197|emb|CAJ99205.1| lysyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
          Length = 501

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 12/261 (4%)

Query: 8   SCGDL-GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
              DL G  D      + G V  +R  G   F+ I D   I Q   + +    E  KS++
Sbjct: 44  YVKDLEGPKDKEKCESIVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDE-FKSLK 102

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L +  +V+    +       TG++ + A +  ILS    +PLP          +R+
Sbjct: 103 KH--LEVGDIVL---VKGFPFATKTGELSIHALEFHILSKT-IVPLPEKFHGLSDIELRY 156

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+LDL  +   K++ K R+ I++S+R     E F+E  TP++        AR F+   
Sbjct: 157 RQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYH 216

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              +   Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++ 
Sbjct: 217 NALEIERY-LRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYH 274

Query: 245 EQDDILNTMENVLRGVFEEFS 265
             +D++   + +   + +  +
Sbjct: 275 TYEDLIELSKRLFDYLLKTLN 295



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   GMPP  G   GIDR+VMLL GAK++++V LFP  +
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMR 489


>gi|238883499|gb|EEQ47137.1| asparaginyl-tRNA synthetase [Candida albicans WO-1]
          Length = 552

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 62/313 (19%), Positives = 115/313 (36%), Gaps = 29/313 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
              + + V + GWVHR+R   G+ F+ +RD  G  Q V   D A  +  + +  E  + I
Sbjct: 123 KDHLDTRVLVQGWVHRLRVQKGLAFITLRDGTGYLQCVLTGDLAKAKQTQELTIESTVAI 182

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFL 131
            G++              G +EL A   +I+++A   +       +     ++    R L
Sbjct: 183 KGVISKLPEG----KTAPGGVELKADHYQIIALAPGGDESFTNKVQENADPNLLLDQRHL 238

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR +TL   +  R     ++R     E   E + P +  +  EG           + ++
Sbjct: 239 ALRGETLSAVMKVRAAYSAAIRRFFAEEGLTEVTPPCMVQNQVEGGSTLFKLDYYGEEAY 298

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  +AS     + I   FR E   + R   E+  ++ E+ F+  +D+L 
Sbjct: 299 --LTQSSQLYLETCLAS-LGDVYCIQESFRAEKSHTRRHLSEYTHIEAELVFITFEDLLT 355

Query: 252 TMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRY------GTDKP 291
            +E +L    +                 +       F R+ Y +A+           D  
Sbjct: 356 HLEKLLSKTIQYVLEDPVAGPIVKQLNPDFKAPKAPFKRMEYIEALDWLNEHGIPNEDGE 415

Query: 292 DLRNPIIMHNVTE 304
             +    +    E
Sbjct: 416 KFKFGDDIAEAAE 428



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R    + ++ A   
Sbjct: 443 RFPAEIKSFYMQRCKDDPRVTESVDV-------LMPNVGEITGGSMRIDNYDELMAALKR 495

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             ++     + +       + G  PHGG   G++R +  +L    VR+ SL+P     C 
Sbjct: 496 ENLNL----DSYYWFTDVRKYGSAPHGGYGIGLERQLAYMLNRYTVRDCSLYPRFTGRCK 551

Query: 571 L 571
            
Sbjct: 552 P 552


>gi|47215025|emb|CAG01849.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 530

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 78/379 (20%), Positives = 141/379 (37%), Gaps = 47/379 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL        + L   VH  R  G   FL +R        +  V         + A ++ 
Sbjct: 79  DLTPEKADQLIWLRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDRASKQMVKFAANIT 138

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-------- 118
            E ++ ++  V  R  E    +     +EL  ++I ++S AE        +         
Sbjct: 139 KESIVDVEASV--RKVEQKIESCSQQDVELHIERIFVVSQAEPRLPLQLDDAVRPDAEGE 196

Query: 119 -----EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                   +  R   R +DLR  T       ++ +    R  +  + F+E  TP + +++
Sbjct: 197 EEGRATVNQDTRLDNRVIDLRTTTSQAVFRLQSGVCQLFRDTLTNKGFVEIQTPKIISAA 256

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F + P FR ED  + R   E
Sbjct: 257 SEGGANVFTVSYFKTSAYLA--QSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHLTE 314

Query: 234 FYQLDMEMSF-VEQDDILNTMENVLRGVFE----------EFSNGNTVSNNF-------- 274
           F  LD+EM+F     ++++++ + +  +F+          +  N    S  F        
Sbjct: 315 FVGLDIEMAFNYHYHEVIDSITDTMVQIFKGLRDNFQTEIQTVNKQFPSEPFKFLEPTLR 374

Query: 275 LRICYDDAIRR----YGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVW 327
           L      A+ R       D+ DL  P    +  + +    ++F V  K  L+V P Y + 
Sbjct: 375 LEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFYTMP 434

Query: 328 AIPAKGGGGNRAFCDRMNE 346
                    +     R  E
Sbjct: 435 DPNNPKYSNSYDMFMRGEE 453



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF            N+     +  YD+   G EI SG  R H ++++ +   +
Sbjct: 422 KYPLAVRPFYTMPD------PNNPK--YSNSYDMFMRGEEILSGAQRVHDAQLLTERAMH 473

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I       +      +F+ G PPHGG   G++R+ ML LG  NVR+ S+FP       
Sbjct: 474 HQIDL----EKIKAYIDSFRFGAPPHGGGGIGLERVCMLYLGLHNVRQTSMFPRDPKRLT 529

Query: 571 L 571
            
Sbjct: 530 P 530


>gi|47230424|emb|CAF99617.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 545

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 116/256 (45%), Gaps = 10/256 (3%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           ++++G VH  R  G  ++F D+R      QV+AN  S  ++  +   +       G ++ 
Sbjct: 92  IKVAGRVHAKRVSGAKLLFYDLRGEGVKLQVMAN--SRNYKSEEQFMAINNKLRRGDIIG 149

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTL 138
                       G++ +   ++ +LS      LP        +  R++ R+LDL   D++
Sbjct: 150 VCGNP--GKTKKGELSIIPNEMILLSPCL-HMLPHLHFGLKDKETRYRQRYLDLILNDSV 206

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQA 197
            +  + R++II  +R  +    F+E  TP++        AR F+        + Y +  A
Sbjct: 207 RQKFITRSKIITYVRSFLDQMGFLEIETPMMNIIPGGAVARPFVTYHNELDMNLY-MRIA 265

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E +L
Sbjct: 266 PELYHKMLVVGGVDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYMAYADYHDLMEITERLL 324

Query: 258 RGVFEEFSNGNTVSNN 273
            G+ ++ + G  ++ +
Sbjct: 325 SGMVKQITGGYKITYH 340



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      + F     +K   ++           A +
Sbjct: 445 EKGLTERFELFVMKKEICNSYTELNDPVRQRELFEQQAKAKAEGDDEAMFIDETFCTALE 504

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 505 YGLPPTAGWGMGIDRLAMFLTDSNNIKEVLLFPAMK 540


>gi|327393352|dbj|BAK10774.1| asparaginyl-tRNA synthetase AsnS [Pantoea ananatis AJ13355]
          Length = 466

 Score =  175 bits (443), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 128/385 (33%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    G+ F+ + D      V A  +++       V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGLSFIAVYDGSCFNPVQAVVNNSLNNYQDEV----LHLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A K+E++   E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASPGQGQAFEIQATKLEVVGWVEDPDSYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++        +   STP++TAS  EGA +    S ++  +     
Sbjct: 132 NLIGAVARVRHTLAQALHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDMENLPRND 191

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           Q    Y +                    AS   + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDYSEDFFGKEAFLTVSGQLNGETYASALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   DD     E +L+ VF+   +                        V+ +F ++
Sbjct: 252 PEIAFASLDDAAALAEAMLKYVFKAVLDERADDMAFFAERVDNDAINRLERFVTTDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+   +   +EH  +   + F   + V    +          
Sbjct: 312 DYTDAVDILMNCGQTFENPVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+      +G+ K      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDARLEEMGLKK----EDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 426 YGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|320120337|gb|EFE28440.2| asparagine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 469

 Score =  175 bits (443), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 65/390 (16%), Positives = 126/390 (32%), Gaps = 56/390 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWV 70
               VG  + + GW+   R      F+++ D      +      +   F+    +     
Sbjct: 19  SKDYVGKEIVVEGWIRTNRSSKSFGFIELNDGTFFKNLQVVYEENLTDFKKISKLCIATA 78

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++                E+ A +I + + +     P+  +R   E +R     
Sbjct: 79  ISVKGTLVETPG-------AKQPFEIKASEIIVEAESSP-EFPLQKKRHTFEYLR-TISH 129

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++       NF+  +TPI+T S  EGA +    +  +   
Sbjct: 130 LRPRGNTYAAVFRVRSIAAYAIHKFFQERNFVYVNTPIITGSDAEGAGEMFHVTTFDFNN 189

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q +    A  +   +   P FR E+  + R   E
Sbjct: 190 IPKNSDNSIDYTKDFFKKSTNLTVSGQLEGECYALAYKNIYTFGPTFRSENSNTARHAAE 249

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSN 272
           F+ ++ E++F + +  ++  E +++ + +                          +  S+
Sbjct: 250 FWMIEPEIAFSDLNGYMDLAEEMIKFIIDYVLEHAPEEMEFFNSFIDKGLLDRLNHVASS 309

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIMHN--VTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           +F RI Y +A+            PI   +   TEH  +    VF K L V    +     
Sbjct: 310 DFKRITYTEAVELLQKSDKKFEYPIEWGSDLQTEHERYLTEEVFKKPLFVTDYPKDI--- 366

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                  R   D     A     PG+  I 
Sbjct: 367 --KAFYMRINDDNKTVAAADLLVPGIGEII 394



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 52/144 (36%), Gaps = 24/144 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +  ++ D+P        K I      F M          ND     A  
Sbjct: 344 HERYLTEEVFKKPLFVTDYP--------KDIKA----FYMRI--------NDDNKTVAAA 383

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R     V+ +   ++G++    E+ +       + G   H G   
Sbjct: 384 DLLVPGIGEIIGGSQREERLNVLSERMKDIGLN----EDDYWWYMELRKYGGVKHAGYGL 439

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +R++M L G  N+R+V  FP +
Sbjct: 440 GFERMIMYLTGMSNIRDVIPFPRT 463


>gi|307719886|ref|YP_003875418.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306533611|gb|ADN03145.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 424

 Score =  175 bits (443), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 69/255 (27%), Positives = 115/255 (45%), Gaps = 19/255 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            S  G  V + GWVHR+R  GGI F+ +RD  G  Q+V        E +  +  E V+ +
Sbjct: 9   ASHTGKDVVVKGWVHRIRELGGISFIILRDRSGEVQLVL-------EGSADLTLESVISV 61

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEE--LPLPVFGEREYPESIRFKYRFL 131
            G V +            G  E+   +IE+L+ AE            +        +R L
Sbjct: 62  KGRVEANEK-------APGGAEIHVGEIEVLARAEPDLPIPINQDPSQLSLDALLDHRML 114

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR   +      +  ++      + ++ F E  T  L A+  EG       +  ++  +
Sbjct: 115 SLRIPKIRSIFTLQAGLVQYFADYLRSQGFSEIKTSKLIATGTEGGTGLFEVNYFDRKVY 174

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DIL 250
            A  Q+PQ YKQ ++ASG +R F+I   +R E   + R   E+  LD+EM+F+E + D++
Sbjct: 175 LA--QSPQFYKQAMVASGMERVFEIGMAYRAEKHDTPRHLNEYVSLDVEMAFIETEHDLM 232

Query: 251 NTMENVLRGVFEEFS 265
           +  E +L  +FE+  
Sbjct: 233 DLEEGILAYMFEKVK 247



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 6/128 (4%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           EW  E+  I+                            +DL+  G EI +GG R +   +
Sbjct: 303 EWAHEKAGIEAVF--VYGFPRRARPFYTYPEGRSSTKSFDLLFRGLEITTGGRRINEYSM 360

Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + +     G++    E   GG    F+ G PPHGG A G++R+   +LG +NVRE SLFP
Sbjct: 361 LKETLPLFGLT----EEGLGGYVEIFKYGCPPHGGFAIGLERLTQKILGLQNVREASLFP 416

Query: 564 MSQNFCDL 571
             +     
Sbjct: 417 RDRRRVSP 424


>gi|315586182|gb|ADU40563.1| lysine--tRNA ligase [Helicobacter pylori 35A]
          Length = 501

 Score =  175 bits (443), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 20/297 (6%)

Query: 8   SCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
              DL    D      + G V  +R  G   F+ I D   I Q   + +    E  KS++
Sbjct: 44  YVKDLEEPKDKEKCESIVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDE-FKSLK 102

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L +  +V+    +       TG++ + A +  ILS    +PLP          +R+
Sbjct: 103 KH--LEVGDIVL---VKGFPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRY 156

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+LDL  +   K++ K R+ I++S+R     E F+E  TP++        AR F+   
Sbjct: 157 RQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFETEGFLEVETPMMHPIPGGANARPFITYH 216

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              +   Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++ 
Sbjct: 217 NALEIERY-LRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYH 274

Query: 245 EQDDILNTMENVLRGVFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
             +D++   + +   + +          ++     N    I Y DA+   G    D+
Sbjct: 275 TYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVISYLDALETIGGISRDI 331



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL GAK++++V LFP
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|322705588|gb|EFY97173.1| lysyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 622

 Score =  175 bits (443), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 95/568 (16%), Positives = 183/568 (32%), Gaps = 116/568 (20%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G +D    ++L+G ++  R  G  + F DIR      QV+A  D+   + A S   + V 
Sbjct: 155 GETDKSRMIQLAGRIYVRRSAGSKLFFYDIRSDGTRLQVLAQADN-LDDKAPSFDEQHVN 213

Query: 72  CIDGLVMSRSAETINANIIT--------GQIELSAQKIEILSVAEELPLPVFGEREYPES 123
              G ++         N  T        G++ ++A +I +LS             + PE 
Sbjct: 214 LRRGDIIGIRGFPTRTNPKTKQGSGEYSGELSIAAVEITLLSPCLHQIPDDHYGFKNPE- 272

Query: 124 IRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            RF+ R+LDL  +   +   + R ++ + +R      +F+   TP+L   +        V
Sbjct: 273 TRFRQRYLDLMMNEKSRQIFITRAKVDSYIRRWFDERDFVSVQTPMLNPIAGGATARPFV 332

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
               +      L  AP+ Y ++L+  G +R +++   FR+E                   
Sbjct: 333 THHNDLNMDMFLRVAPELYLKMLVVGGLNRVYEMGRQFRNES------------------ 374

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
                  ++   N                                 +   L   +   +V
Sbjct: 375 -------MDLTHN--------------------------------PEFTTLEFYMAYADV 395

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
            +    +E  V   +  ++  Y+      KG   +  +      W R +  P L      
Sbjct: 396 YDLMTMTEELVSGLVKHIHGSYKTTYHTIKGEEISINWE---GPWRRIEMIPAL------ 446

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
                 V    P A  L+         ++  + G     +   P    +   DA   + +
Sbjct: 447 ---EEAVGEKFPPADTLHTEEANQFFKKVLAKTG-----VECSPPLTNARMLDA--LVGE 496

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            L           +I+                  +P  M        K +        ++
Sbjct: 497 YL---ESQAINPTFII-----------------GHPKMMSPLA----KDSRTTPGLCERF 532

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGG 538
           ++  +  EI +     +++      F      K   ++          +A +  +PP GG
Sbjct: 533 EVFVSTKEIVNAYTELNVAAEQRLRFEEQARQKSQGDDEAQMADETFCQALEHALPPTGG 592

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              GIDR++M L    ++REV  FP  +
Sbjct: 593 WGMGIDRMMMFLTDNYSIREVLAFPTMK 620


>gi|238879778|gb|EEQ43416.1| aspartyl-tRNA synthetase [Candida albicans WO-1]
          Length = 578

 Score =  175 bits (443), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 70/290 (24%), Positives = 123/290 (42%), Gaps = 28/290 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAKSVRS 67
           DL V++ G  V     VH+ R  G  ++FL +R    + Q  +  N D+    ++K +  
Sbjct: 117 DLSVANDGETVTFRARVHKTRQQGATMVFLTLRQQSELIQALLKTNKDTDSTAVSKQMVK 176

Query: 68  E-------WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                    ++ ++G V     +  +A +    +E+   KI  +    E    +  +   
Sbjct: 177 WTGSINLESIVLVEGKVAKVEEKIKSATV--QDVEILISKIYTIQETPEQLPLLIEDASR 234

Query: 121 PE-------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
            E               R   R +DLR  T       ++ +    R  +I + F E  TP
Sbjct: 235 SEKESEELGLPGVNLDTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLIKKGFTEIHTP 294

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            +  ++ EG  +    +     +F A  Q+PQ YKQ L+A+ F++ F+IAP FR E+  +
Sbjct: 295 KIIGAASEGGSNVFEINYFKGSAFLA--QSPQLYKQQLIAADFEKVFEIAPVFRAENSNT 352

Query: 228 DRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            R   EF  LD+EM+F    D++L  +E +   +F E     +     +R
Sbjct: 353 HRHMTEFTGLDLEMAFEQHYDEVLEVLEELFVFIFTELKTRFSKEIATVR 402



 Score =  102 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 44/118 (37%), Gaps = 10/118 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF             D     +  YD    G EI SG  R H  +++ Q    
Sbjct: 468 KFPLAVRPFYTMPDS------EDPR--YSNSYDFFMRGEEILSGAQRIHDPKLLTQRMKE 519

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             +   V          AF  G PPH G   G++R+VM  L  KN+R  SLFP     
Sbjct: 520 HEVDPNV--PGLNDYVEAFTYGCPPHAGGGIGLERVVMFFLDLKNIRRASLFPRDPKR 575


>gi|312131851|ref|YP_003999191.1| asparaginyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908397|gb|ADQ18838.1| asparaginyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 480

 Score =  175 bits (443), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 107/282 (37%), Gaps = 24/282 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L ++  G  + + GWV   R    I+F++I D   +  + A       E  K       L
Sbjct: 7   LKLTPEGQSIVVKGWVKTKRGQSNIVFININDGSTLKNIQA-----VVENGKISEDILKL 61

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  ++ + + + +      +E+ A+ IE+   A+E   P+  ++   E +R K   L
Sbjct: 62  ATTGSAIAVTGKLVASAGAGQTMEVLAETIEVYGTADE-SYPIQPKKHSLEFLREK-AHL 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +        R  +  ++      + F    TPI+TAS  EGA +    S       
Sbjct: 120 RFRTNVFGAVFRIRHALAYAVHKFYNEQGFFYLHTPIITASDAEGAGEMFRVSTFEPNKA 179

Query: 190 ------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+    A     Q +  L A    R +   P FR E+  + R   EF
Sbjct: 180 PLTPEGNIDFSQDFFGRETALTVSGQLEGELGALALSRIYTFGPTFRAENSNTSRHLAEF 239

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           + ++ E++F E +D +N  E+ ++ V             FL 
Sbjct: 240 WMIEPEVAFFELEDNMNLAESFVKYVISYALENCKEDLEFLE 281



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 72/204 (35%), Gaps = 27/204 (13%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
           L     +    R +++  +   F+  +  +  ++       +  +        +E  W +
Sbjct: 285 LEEEKQKPQNERSELKLIEKLKFVVENDFERLTYTEAIDILLKSKPAQKKQFQYEVAWGI 344

Query: 439 DFPFYEWNEEEKKIDFAHN--------------PFTMPQGGMESLKGNDLLSIKAFQYDL 484
           D      +E E+ +   H                F M Q     L G    +++A   D+
Sbjct: 345 DL----QSEHERYLVEKHFKKPVILTNYPKEIKAFYMKQDD--ELNGAPGATVRAM--DV 396

Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +  G  EI  G  R    E ++     VGI  E +           + G  PH G   G 
Sbjct: 397 LFPGIGEIIGGSQREDNYEKLMARVKEVGIDPENIW----WYLETRKFGSAPHSGFGLGF 452

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V+ + G  N+R+V  FP +  
Sbjct: 453 ERLVLFVTGMTNIRDVIPFPRTPK 476


>gi|195427261|ref|XP_002061695.1| GK17133 [Drosophila willistoni]
 gi|194157780|gb|EDW72681.1| GK17133 [Drosophila willistoni]
          Length = 548

 Score =  175 bits (443), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/361 (20%), Positives = 134/361 (37%), Gaps = 29/361 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFE 60
            R R    G    +  GS V++ GWVHR+R  G  + F+ +RD  G  Q V         
Sbjct: 113 KRIRIREIG----THGGSRVKVFGWVHRLRRQGKALMFVTLRDGTGFLQSVLTDLRCQTY 168

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  + +E  + + G++              G +EL     E++ +A           E 
Sbjct: 169 EALMLSTESAVALYGVLKPVPDG----KSAPGDLELHVDFWELIGLAPPGGADAILNEEA 224

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
              ++   R + +R +   K +  R+ ++ + R       + E + P L  +  EG    
Sbjct: 225 HPDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRAHYEDRGYNEVTPPTLVQTQVEGGSTL 284

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  + +F  L Q+ Q Y +  +       F IA  +R E  R+ R   E+  ++ E
Sbjct: 285 FKMQYFGEEAF--LTQSSQLYLETCLP-ALGDVFTIAQSYRAEQSRTRRHLAEYTHIEAE 341

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYG 287
             F+  DD+L  +E+++  V +                +       F R+ Y DAI+   
Sbjct: 342 CPFISYDDLLTRLEDLVCDVVDRVLKGPYGQLVYELNPDFKAPKRPFRRMDYADAIKWLK 401

Query: 288 TDKPDLRNPI-IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMN 345
            +  D+R      +   E    +  R  +  ++       + +  K    +R   D R+ 
Sbjct: 402 AN--DVRKDDGTFYEFGEDIPEAPERKMTDTINEPILLCRFPVAIKSFYMSRCPEDQRLT 459

Query: 346 E 346
           E
Sbjct: 460 E 460



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   A   F M +   +      +         L+ N  EI  G +R   SE +L+ ++ 
Sbjct: 439 RFPVAIKSFYMSRCPEDQRLTESVDV-------LLPNVGEIVGGSMRIWDSEELLKGYAR 491

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             I        +         G  PHGG   G++R +  LL   ++R+V L+P 
Sbjct: 492 EEIDPTP----YYWYTDQRVYGTMPHGGYGLGLERFLCWLLNRYHIRDVCLYPR 541


>gi|219681718|ref|YP_002468104.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682273|ref|YP_002468657.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471416|ref|ZP_05635415.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|219622006|gb|ACL30162.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624561|gb|ACL30716.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086097|gb|ADP66179.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086671|gb|ADP66752.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087255|gb|ADP67335.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 466

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 57/291 (19%), Positives = 108/291 (37%), Gaps = 24/291 (8%)

Query: 6   THSCGDLGVSD--VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIA 62
           T S  D+   D  V S + + GWV   R    G  F+ I D      +    ++      
Sbjct: 3   TVSISDIYKDDIIVNSLITVCGWVRNRRSSKSGFSFITIYDGSCFNSIQVIANNTLPNYY 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +    +    G  +  S + I +     + E+  +KI++L   E         +++  
Sbjct: 63  KEI----LHLTTGCSVMLSGKLILSIGDKQKYEIQLKKIKVLGWVENPETYPISSKKHST 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
               +   L  R + +      R  I++S+      E +    TPI+T+ + EGA +   
Sbjct: 119 EYLREVAHLRSRTNLIGAIARIRNYILHSLHHFFYKEKYYWVPTPIITSLNTEGAGEMFR 178

Query: 183 PSRVNQGSFYALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDP 225
            S ++  +      +   +K+                    A    + +   P FR E+ 
Sbjct: 179 VSTLDMENIPKNLDSSVDFKKDFFGKESFLTVSGQLNLETYACSLSKVYTFGPTFRAENS 238

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            + R   EF+ L++E +F + +DI +  E +L+ V +          NFL 
Sbjct: 239 NTGRHLAEFWMLEVESAFTDLNDISDFAECMLKYVCKSLLKKCITDINFLE 289



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV N  E+  G  R     ++ +    +G+ K      +       + G  PH G   G 
Sbjct: 383 LVPNVGELIGGSQREERIAILDERLLELGLKK----EDYWWYRDLRRYGTVPHSGFGMGF 438

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R++    G  N+R++  FP + N
Sbjct: 439 ERLISYFTGITNIRDLIPFPRTVN 462


>gi|311896806|dbj|BAJ29214.1| putative lysyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 530

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 58/274 (21%), Positives = 107/274 (39%), Gaps = 18/274 (6%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RT +  DL             G  V ++G V   R  G + F  +RD  G  QV+ + D 
Sbjct: 41  RTTTIADLRDKHPDLAPDTATGERVGVTGRVVLARTGGKLCFATLRDGSGDLQVMFSLDR 100

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E   + + +  L   G  +    E I +    G++ +   + E+ +     PLP   
Sbjct: 101 LGAERLAAWKGDIDL---GDQVGVEGEVITSK--RGELSVLVDRWELTAKCLR-PLPDKH 154

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R++DL  +   + ++  RT+++ S+R       ++E  TP+L      
Sbjct: 155 KGLSDPEARVRQRYVDLIVNPEAREMLLLRTKVVRSIRRTYEDRGYLEVETPMLQPIHGG 214

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F           Y L  A + Y + L+  G ++ F+I   FR+E   +   P EF
Sbjct: 215 ANARPFKTHINAYDIELY-LRIATELYLKRLVVGGAEKVFEINRNFRNEGADATHNP-EF 272

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
             L+   ++ + D     +  ++     +     
Sbjct: 273 TALESYEAYGDYDTQAELIRAIIVNAARDALGTT 306



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 56/154 (36%), Gaps = 28/154 (18%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                 + + L  +  +  +  +I D+P             + +P T     +E      
Sbjct: 372 GQIVLELVERL--LEHHAIKPTFIKDYP------------TSVSPLTRRHRSIE------ 411

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAF 529
                A ++DLV  G EI +               +   +                 RA 
Sbjct: 412 ---GVAEKWDLVIFGTEIGTAYSELIDPVEQRARLTAQSLLAAGGDVEAMQLDEDFLRAL 468

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +  MPP GG+  G+DR++MLL G KN+RE  LFP
Sbjct: 469 EYAMPPTGGLGLGVDRLIMLLTG-KNIRETVLFP 501


>gi|241958322|ref|XP_002421880.1| aspartyl-tRNA synthetase, cytoplasmic, putative [Candida
           dubliniensis CD36]
 gi|223645225|emb|CAX39824.1| aspartyl-tRNA synthetase, cytoplasmic, putative [Candida
           dubliniensis CD36]
          Length = 578

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 85/387 (21%), Positives = 148/387 (38%), Gaps = 55/387 (14%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAKSVRS 67
           DL V++ G  V     VH  R  G  ++FL +R    + Q  +  N D+    ++K +  
Sbjct: 117 DLSVANDGETVIFRARVHNTRQQGATMVFLTLRQQSELIQALLKTNKDTDSTAVSKQMVK 176

Query: 68  E-------WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                    ++ ++G V     +  +A +    +E+   KI  +    E    +  +   
Sbjct: 177 WTGSVNLESIVLVEGKVAKVEEKIKSATV--QDVEILISKIYTIQETPEQLPLLIEDASR 234

Query: 121 PE-------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
            E               R   R +DLR  T       ++ +    R  +I + F E  TP
Sbjct: 235 SEKESEELGLPGVNLDTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLIKKGFTEIHTP 294

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            +  ++ EG  +    +     +F A  Q+PQ YKQ L+A+ F++ F+IAP FR E+  +
Sbjct: 295 KIIGAASEGGSNVFEINYFKGSAFLA--QSPQLYKQQLIAADFEKVFEIAPVFRAENSNT 352

Query: 228 DRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR---------I 277
            R   EF  LD+EM+F    D++L  +E +   +F E     +     +R         I
Sbjct: 353 HRHMTEFTGLDLEMAFEQHYDEVLEVLEELFVFIFTELKTRFSKEIATVRKQFPVEEFKI 412

Query: 278 CYDDAIRRY------------GTDKPDL-----RNPIIMHNVTEHFVHSEFRVFSK-ILS 319
             D  + +             G D  D       N  ++  +      ++F +  K  L+
Sbjct: 413 PKDGKMVKLHFKEGIAMLREAGKDVDDFEDLSTENEKLLGRLVREKYDTDFYILDKFPLA 472

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           V P Y +          +  F  R  E
Sbjct: 473 VRPFYTMPDSEDPRYSNSYDFFMRGEE 499



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 44/121 (36%), Gaps = 10/121 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF             D     +  YD    G EI SG  R H  +++ Q    
Sbjct: 468 KFPLAVRPFYTMPDS------EDPR--YSNSYDFFMRGEEILSGAQRIHDPKLLTQRMKE 519

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             +   V          AF  G PPH G   G++R+VM  L  KN+R  SLFP       
Sbjct: 520 HEVDPNV--PGLNDYVDAFTYGCPPHAGGGIGLERVVMFFLDLKNIRRASLFPRDPKRLT 577

Query: 571 L 571
            
Sbjct: 578 P 578


>gi|309356245|emb|CAP37482.2| CBR-NARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 564

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 64/358 (17%), Positives = 126/358 (35%), Gaps = 29/358 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAK 63
           +T   G    +     V +  WVHR+R  G  ++FL +RD YG  Q V N        A 
Sbjct: 115 KTIKIGQ-ATAHRDQRVTIKAWVHRLRRQGKSLMFLILRDGYGFLQCVLNDKLCQSYDAV 173

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++ +E  + + G++ +      N        EL+    E++  +    +     ++    
Sbjct: 174 TLSTESSVQVYGVIRAVP----NGKDAPDGHELTVDYWELIGGSPAGGIDNVLNKDAGVD 229

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +    R L +R +   + +  R     +MR    A ++ E + P L  +  EG       
Sbjct: 230 VMLDNRHLVIRGENASRILRIRAAATRAMRDHFFAASYTEVAPPTLVQTQVEGGSTLFGL 289

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++  L Q+ Q Y +   A      + IA  +R E  R+ R   E+  ++ E +F
Sbjct: 290 DYYGEPAY--LTQSSQLYLETCNA-ALGDVYCIAQSYRAEKSRTRRHLSEYQHVEAECAF 346

Query: 244 VEQDDILNTMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTD 289
           +  D +++ +E+++    +                         F R+ Y +AI     +
Sbjct: 347 ITFDQLMDRIESLVCDTVDRLLADPVTAGLIQFVNPGYTAPVRPFRRMQYKEAIAWLQEN 406

Query: 290 K------PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
                          +    E  +     V S +           +  +   G +AF 
Sbjct: 407 DVRNENGEKFVYGEDIAEAAERKMTDTIGVVSILFLYEKKIRAPILLNRFPAGIKAFY 464



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAF 508
            +       F MP+   +               DL+  G  EI  G +R    + ML AF
Sbjct: 454 NRFPAGIKAFYMPRCEDD--------KDLTESVDLLMPGVGEIVGGSMRIWKEDEMLAAF 505

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              G+S       +       + G  PHGG   G++R +  L G  ++R+V L+P 
Sbjct: 506 ERAGLSPT----NYFWYMDQRKYGSVPHGGYGLGLERFICWLTGTNHIRDVCLYPR 557


>gi|227872716|ref|ZP_03991043.1| asparagine--tRNA ligase [Oribacterium sinus F0268]
 gi|227841441|gb|EEJ51744.1| asparagine--tRNA ligase [Oribacterium sinus F0268]
          Length = 462

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 72/372 (19%), Positives = 127/372 (34%), Gaps = 56/372 (15%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
              + + V +SGWV   R      FL I D    T +      +    A++ +       
Sbjct: 14  EEYLDTEVMVSGWVRSNRDSKNFGFLVISDGTFFTPLQVVYHDSLENFAQAAK-----LG 68

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +    + +         EL A  I +    E    P+  +R   E +R     L  
Sbjct: 69  VGAAVIVEGKLVATPEAKQPFELQASSITVEGDTEA-SYPLQKKRHTLEYLR-TIPHLRP 126

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG---- 189
           R +T       R+++  ++        F+   TPI+TAS  EGA +    + +       
Sbjct: 127 RTNTFQAVFRIRSQVAFALHSFFQERGFVYVHTPIITASDTEGAGEMFQVTTLPLESVPM 186

Query: 190 ---------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+    +     Q      A  F   +   P FR E   + R   EF+ +
Sbjct: 187 EKGEVQYGEDFFGKKTSLTVSGQLNGETFAQAFRDIYTFGPTFRAEKSNTQRHAAEFWMI 246

Query: 238 DMEMSFVEQDDILNTMENVLRGVFE----------EFSNG-----------NTVSNNFLR 276
           + EM+F + DD++   E++L+ V +          EF N            + V + F R
Sbjct: 247 EPEMAFADLDDVMFIAEDMLKYVIQYVLVNAPEELEFLNQFVDKGLLDRLNHIVESEFAR 306

Query: 277 ICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           + Y +A+             +       TEH  +    V+ + + V    +         
Sbjct: 307 VTYTEAVEILQKQNDRFEYKVEWGCDLQTEHERYLTEEVYKRPVFVTDYPKDI------- 359

Query: 335 GGNRAFCDRMNE 346
              +AF  ++NE
Sbjct: 360 ---KAFYMKLNE 368



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 51/150 (34%), Gaps = 24/150 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +         ++ D+P        K I      F M           D  ++ A  
Sbjct: 337 HERYLTEEVYKRPVFVTDYP--------KDIKA----FYMK-------LNEDGKTVAAVD 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    E + +    + +  E  E          + G   HGG   
Sbjct: 378 C-LVPGIGEIIGGSQREDDYEKLKKRMEELKMDLEEYE----FYLDLRRYGSTRHGGFGL 432

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R VM + G  N+R+V  FP +   C+L
Sbjct: 433 GFERAVMYITGMSNIRDVLPFPRTVGNCEL 462


>gi|224043707|ref|XP_002190256.1| PREDICTED: similar to asparaginyl-tRNA synthetase 2, mitochondrial
           (putative) [Taeniopygia guttata]
          Length = 473

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 58/265 (21%), Positives = 103/265 (38%), Gaps = 20/265 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           LG  +    VR+ GWV  VR    ++FL I D   +  +    D +     + +     +
Sbjct: 29  LGAREAAEAVRVQGWVRSVRSQKEVLFLHINDGSSLESLQVVADPSLE--TRDLTFGSAV 86

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G ++       N       +EL A+ I ++   +    P+  +  +P     ++  L
Sbjct: 87  EVQGKLVKSPHRMQN-------MELQAETIHVVGPCDIWSFPLKMKERHPLEYVRQFPHL 139

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP-------- 183
             R +TL   +  R+     +        ++   TPI+T++  EGA +            
Sbjct: 140 RCRNNTLGALLRIRSEATAGIHSFFQDNGYVHIHTPIITSNDCEGAGELFQIETSREAKE 199

Query: 184 --SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                +  +  A      Q    +MA  F   F   P FR E+ +S R   EFY ++ E+
Sbjct: 200 SAENTHFFNVPAFLTVSGQLHLEVMAGAFTHVFTFGPTFRAENSQSRRHLAEFYMVEAEL 259

Query: 242 SFVEQ-DDILNTMENVLRGVFEEFS 265
           SF E   DI+  ME++ + V     
Sbjct: 260 SFTENLQDIMQVMEDLFKTVTSTVL 284


>gi|15827030|ref|NP_301293.1| lysyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221229508|ref|YP_002502924.1| lysyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|13432212|sp|P46861|SYK_MYCLE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|13092577|emb|CAC29741.1| putative lysyl-tRNA synthase [Mycobacterium leprae]
 gi|219932615|emb|CAR70326.1| putative lysyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 507

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 59/270 (21%), Positives = 114/270 (42%), Gaps = 20/270 (7%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD 55
           RTH+  ++          S     V ++G V   R  G + F  ++D  G   QV+ + +
Sbjct: 40  RTHTLAEVRAAYPDLATDSATDDIVGIAGRVIFARNSGKLCFATLQDGDGTNLQVMISLN 99

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   ++ +  V    G ++      I++   +G++ + A   +++S +        
Sbjct: 100 KVGSE---TLDAWKVDVDLGDIVYVHGNVISSR--SGELSVLADSWQMVSKSLRPLP--V 152

Query: 116 GEREYPESIRFKYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL     +     +R  +I ++R  +    F+E  TP+L   + 
Sbjct: 153 AHKEMSEESRVRQRYVDLIVCPQVRIVAHQRIAVIRAIRTALERRGFLEVETPMLQTLAG 212

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  GFD+ F++   FR+E   S   P E
Sbjct: 213 GAAARPFVTHSNALDIDLY-LRIAPELFLKRCIVGGFDKVFELNRVFRNEGADSTHSP-E 270

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++   DD       +++ V +E
Sbjct: 271 FSMLETYQTYGTYDDSAVVTREIIQEVADE 300



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 49/135 (36%), Gaps = 26/135 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ DFP      E   +   H                  +     ++DL   G E+A
Sbjct: 388 APTFVKDFPV-----ETTPLTRQHR----------------SIPGVTEKWDLYLRGVELA 426

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVM 548
           +G    +   V  + F     +    E+    L      A +  MPP  G   GIDR++M
Sbjct: 427 TGYSELNDPVVQRERFGQQVRAAAAEEDEAMALDEEFLAALEYAMPPCTGTGMGIDRLLM 486

Query: 549 LLLGAKNVREVSLFP 563
            L G  ++RE  LFP
Sbjct: 487 SLTGL-SIRETVLFP 500


>gi|238854630|ref|ZP_04644960.1| asparagine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664427|ref|ZP_05865279.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932979|ref|ZP_06338376.1| asparagine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472177|ref|ZP_07812669.1| asparagine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832420|gb|EEQ24727.1| asparagine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529548|gb|EEQ68549.1| asparagine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260561492|gb|EEX27464.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303014|gb|EFA95219.1| asparagine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 432

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 71/323 (21%), Positives = 123/323 (38%), Gaps = 28/323 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
              VG  V++  W+   R  G I+FL +RD         +  +     F++AKS+R E  
Sbjct: 11  PEYVGKEVKMHVWLTDKRSSGKIMFLQLRDGTAFFQGVLLKKDVSEEKFDLAKSLRQEAS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             I G++                 E+    +E++S  E+ P    G +E+       +R 
Sbjct: 71  FYITGVINEDERSHF-------GYEIKISDLELVSNTEDYP---IGNKEHGIDFLLDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R  +IN+       E FI+   PIL  S+PEG  +       +  +
Sbjct: 121 LWLRSRRPFAIMQIRNEMINATYDFFKKEGFIKFDAPILMNSAPEGTTELFHIEYFDNDA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y   + A  F + F   P FR E  ++ R   EF+ ++ EM++  QD+ L
Sbjct: 181 Y--LSQSGQLY-AEVGAEAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAWTHQDESL 237

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           +  E  +  + +   +             +  +   G D   LR P    N T       
Sbjct: 238 DVQERYISYLVKRVIDN-----------CEYELNILGRDVEKLR-PAAEGNYTRLKYDDA 285

Query: 311 FRVFSKILSVNPGYEVWAIPAKG 333
            ++           + +  P + 
Sbjct: 286 VKMLQDAGRDFKWGDDFGAPDEA 308



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 52/179 (29%), Gaps = 18/179 (10%)

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
             +G+       D +K    A         + G  +       +  D P +  N      
Sbjct: 272 AAEGNYTRLKYDDAVKMLQDAGR-DFKWGDDFGAPDEAYISEQF--DRPVFIMN-----Y 323

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
             +  PF M +      +      +    Y       EI  G  R    +V+       G
Sbjct: 324 PTSIKPFYMKKDPENPKEYLCADMLAPEGY------GEIVGGSEREENFDVLKAQIEEAG 377

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           ++       +       + G  PH G   G +R +  +    ++RE   FP   N  + 
Sbjct: 378 LNL----ENYEWYLDLRRYGSVPHSGFGLGFERAITWICHLDHLREAIPFPRMINRMEP 432


>gi|254459446|ref|ZP_05072865.1| lysyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207083856|gb|EDZ61149.1| lysyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 505

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/330 (18%), Positives = 121/330 (36%), Gaps = 18/330 (5%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           +SG +  +R  G   FL I D  G  Q+    D+        +     L   G ++    
Sbjct: 61  VSGRIKLLRIMGKASFLQIEDESGTLQIYLARDNLPEGFYNDIFK--KLIEVGDIIEVGG 118

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKN 141
                    G++ L A   ++L+ A   PLP        + IR++ R+LDL  +  + K 
Sbjct: 119 --YPFVTGQGELSLHADDFKLLTKAIS-PLPEKFHGVTDKEIRYRKRYLDLIMNADVRKT 175

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
              R+++I+  R     + F+E  TP++   +        V      G    L  AP+ Y
Sbjct: 176 FKTRSKVISLTRRFFEDKGFLEVETPMMHPIAGGANAKPFVTHHNALGIDRFLRIAPELY 235

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+  GF+  F+I   FR+E   +   P EF  ++   ++    D++   +     +F
Sbjct: 236 LKRLIVGGFEAVFEINRNFRNEGMDATHNP-EFTSIEFYWAYKTYKDLIRITKEYFEYLF 294

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
           +  +    +    + + +++                ++ ++T      E  V  K   V 
Sbjct: 295 DHLNLPTLLPYGDMEVNFNN-----------FTEIALIESLTTIGGVPEEVVNDKEKIVE 343

Query: 322 PGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
                      G    +   +  +E+   +
Sbjct: 344 FLKSKDITVKPGQNLGQLQGELFDEFVEEK 373



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 50/129 (38%), Gaps = 5/129 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            ++   EEK ID        P       + +DL      +++L   G EIA+     +  
Sbjct: 365 LFDEFVEEKLIDPT-FITEYPVEISPLARRSDLNPAITERFELFIAGREIANAFSELNDP 423

Query: 502 EVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F     +K+               A   GM P  G   GIDR+VMLL    ++R
Sbjct: 424 VDQYERFKGQVDAKDAGDDEAHEMDEDFIDALSYGMAPTAGQGIGIDRLVMLLTNEHSIR 483

Query: 558 EVSLFPMSQ 566
           +V LFP  +
Sbjct: 484 DVLLFPAMK 492


>gi|157131591|ref|XP_001655895.1| aspartyl-tRNA synthetase [Aedes aegypti]
 gi|108881819|gb|EAT46044.1| aspartyl-tRNA synthetase [Aedes aegypti]
          Length = 534

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 66/281 (23%), Positives = 111/281 (39%), Gaps = 24/281 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-----NPDSACFEIAKSV 65
           DL      S V + G VH  R  G   FL +R      Q V             + + S+
Sbjct: 81  DLSTCAKDSLVWVRGRVHTSRAKGKQCFLVLRQQSSTVQCVLAVNDSTVSKQMVKFSGSI 140

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--------------EELP 111
             E ++ I   V+   ++    +     +EL   +I ++S A              E+  
Sbjct: 141 PRESIIDIKAKVVQVESKI--ESCTEQNLELHVVEIFLVSAAKAQLPLQIEDAARPEKSD 198

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
            P   +    +  R   R LDLR             +    R  +  + F E  TP + +
Sbjct: 199 DPEALKIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDILSNKGFTEIHTPKIIS 258

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +    S   + ++ A  Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R  
Sbjct: 259 AASEGGANVFTVSYFKESAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHL 316

Query: 232 GEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVS 271
            EF  LD+EM+F     ++L+T+ N    +F+   +     
Sbjct: 317 TEFVGLDLEMAFKYHYHEVLDTIGNTFTEIFKGLRDNYARE 357



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF TMP                +  YD+   G EI SG  R H  E +++   
Sbjct: 426 KFPLAVRPFYTMPDPSNPKY---------SNSYDMFMRGEEILSGAQRIHDPEYLVERAK 476

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           +  I      ++      AF+ G PPH G   G++R+VML LG  N+R+ S+FP      
Sbjct: 477 HHAIDI----SKIAAYIEAFRFGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRL 532

Query: 570 DL 571
             
Sbjct: 533 TP 534


>gi|294660221|ref|NP_852857.2| lysyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|298286866|sp|Q7NC34|SYK_MYCGA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|284811876|gb|AAP56425.2| lysyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930318|gb|ADC30257.1| lysyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 492

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 65/344 (18%), Positives = 128/344 (37%), Gaps = 28/344 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   S   L    +   + +SG V  +R      F+ I+D +   Q+  N +    ++
Sbjct: 43  EKYDQFSKEQLAEMQLDKPITVSGRVILIRR----TFILIQDFHSELQLYINKNKQP-DL 97

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K       L   G V+  + + +  N  T ++ L  + ++I+S +     P        
Sbjct: 98  FKYFNDYLDL---GDVVCATGKPMKTN--TNELSLDLESLKIISKSLR-VPPEKFHGIAD 151

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           E IR + R+LDL  +   K     R++II +MR       F+E  TP L A     A   
Sbjct: 152 EEIRSRKRYLDLVYNKESKERFVYRSKIIAAMRQYFNENGFLEVETPFLHAQIGGAAAKP 211

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            V         Y L  AP+   + L+   F++ ++I  CFR+E   S   P EF  ++  
Sbjct: 212 FVTRYNALDRDYYLRIAPELPLKKLIVGSFEKIYEIGKCFRNEGMDSTHNP-EFTSVETY 270

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +++V+   ++   E +++ + +                   +      +  D   P    
Sbjct: 271 VAYVDYIYMMELTEAIIKYIAKAIG---------------ISHTNIKNETIDWNKPFKRI 315

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            +TE         F+++  ++   ++          +      +
Sbjct: 316 KMTELVKQETGIDFTQVKKIDQALDLAKKHKVHVKEHEKTIGHI 359



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 11/129 (8%)

Query: 442 FYEWNEEEKKID---FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   E+K ++     H+P  +    +  L  +D       +++L   G E+A+G    
Sbjct: 363 FFEEFCEKKLVEPTFVTHHPVEISP--LSKLDYSDPR--YTERFELFAFGKELANGFSEL 418

Query: 499 HMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      Q F      K+               A + G+PP GG+  G+DR+VM+L G  
Sbjct: 419 NDPIDQRQRFEKQLEEKQKGNDEASEMDEDFLEALENGLPPTGGLGIGVDRLVMMLTGTT 478

Query: 555 NVREVSLFP 563
           ++R++  FP
Sbjct: 479 SIRDILFFP 487


>gi|260772904|ref|ZP_05881820.1| asparaginyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260612043|gb|EEX37246.1| asparaginyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 466

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 56/300 (18%), Positives = 104/300 (34%), Gaps = 30/300 (10%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLC 72
           V S V + GW+   R    GI FL + D      + A   N  +   +    + +   + 
Sbjct: 16  VNSEVTVRGWIRTRRDSKAGISFLALYDGSCFDPIQAVVPNSLNNYQDEVLKLTTGCSVE 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G V+   A            EL+A +++++   E+       +  +      +   L 
Sbjct: 76  ITGTVVESPASG-------QDFELAATELKVVGWVEDAETYPMAKTRHSIEYLREVAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----- 187
            R + +      R  +  ++      + +   S P++TAS  EGA +    S ++     
Sbjct: 129 PRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDFANLP 188

Query: 188 ---------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 189 RQENGEIDFNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL--RICYDDAIRRYGTDKPDL 293
            ++ E++F +  D+    E++L+ VF            F   RI  D   R     + D 
Sbjct: 249 MVEPEVAFADLHDVAQLAEDMLKYVFNAVLTERRDDLEFFASRIDKDAITRLEQFVQSDF 308



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 6/99 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+      +GI                +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDARMIEMGIDP----EHMSWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 426 YGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|46128767|ref|XP_388937.1| hypothetical protein FG08761.1 [Gibberella zeae PH-1]
          Length = 610

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 54/339 (15%), Positives = 128/339 (37%), Gaps = 18/339 (5%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDS------ACFEIAKSVRSEWV 70
              +++   VH  R  G  ++F D+R      Q++           +  +  + +R   +
Sbjct: 123 DKIIQIGARVHGKRASGAKLLFYDVRTEGVKVQIMCQAQEVREGAPSFEDQHEHLRRGDI 182

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I G     + +T       G++ + A ++ +L+      LP           R++ R+
Sbjct: 183 IGIIGYPGRTAPKTKIEKGEEGELSIFATEVVLLTPCL-HALPDDHYGFKDLEQRYRKRY 241

Query: 131 LDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDL   +      + R+++I  +R      +F+E  TP++   +                
Sbjct: 242 LDLICNEKARNVFITRSKMITWIRKYFDERDFVEVETPMMNQIAGGATAKPFTTHHNEYD 301

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               +  AP+ Y ++L+  G +R ++I   FR+E       P EF  ++   ++ + +D+
Sbjct: 302 MPMFMRVAPELYLKMLVVGGLNRVYEIGRQFRNEGADLTHNP-EFTTIEFYEAYADVNDL 360

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFV 307
           + T E ++ G+ +  + G   + +               + P  R  +I  +   T    
Sbjct: 361 MKTTEEMISGLVKYLTGGYKTTFH----TQSGEKYEVNWEAPWPRYEMIPTLEEATGEKF 416

Query: 308 HSEFRVFSKILS--VNPGYEVWAIPAKGGGGNRAFCDRM 344
            S  ++ ++  +  +    +   +       N    D++
Sbjct: 417 PSGDQLHTQETNEFLKNVLKKMNLECTPPLTNARMIDKL 455



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 4/92 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++      EIA+     +        F      K+  ++           + + 
Sbjct: 488 PGLCERFEAFVCKKEIANAYTELNDPFDQRLRFEEQARQKDQGDDEAQLVDENFCTSLEY 547

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP GG   GIDR+VM L     +REV  FP
Sbjct: 548 GLPPTGGWGMGIDRMVMFLTDNYTIREVLTFP 579


>gi|212529550|ref|XP_002144932.1| lysyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210074330|gb|EEA28417.1| lysyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 602

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 53/302 (17%), Positives = 117/302 (38%), Gaps = 23/302 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV-----VANPDSA 57
           Y +   G+L      + V+++G +   R  G  + F D+R      Q+      A  D  
Sbjct: 112 YASLGKGELKQ---DTVVQVAGRIENKRSAGTKLFFYDLRAEGIKLQILCQAQYATGDVP 168

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             +  + +R   ++ I G        +       G++ + A ++++L+            
Sbjct: 169 FADQHEQLRRGDIIGITGF----PGRSNPKTRDEGELSIFATQVKLLAPCLHALPR---- 220

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                  RF+ R+LDL  +   + +   R +I+  +R    + +F E  TP++ A +   
Sbjct: 221 GLQDSETRFRQRYLDLIMNESSRKVFTTRAKIVRYVRNFFDSRDFTEVETPMMNAIAGGA 280

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                +       +   +  AP+ Y ++L+  G +R +++   FR+E       P EF  
Sbjct: 281 TAKPFITHHNEYNTNLFMRVAPELYLKMLIVGGLERVYELGRQFRNEGADLTHNP-EFTT 339

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
            +   ++ +  D++N  E ++ G+ +  + G   + +         +       P  R  
Sbjct: 340 CEFYWAYADVYDVMNLTEELVSGLVKHVTGGYETTFH----TQSGEVYNVNWQAPWRRVE 395

Query: 297 II 298
           +I
Sbjct: 396 MI 397



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 37/111 (33%), Gaps = 6/111 (5%)

Query: 459 FTMPQGGMESLKGNDLLS--IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F M    M S              +++      EI +     +        F      K 
Sbjct: 461 FIMGHPQMMSPLAKYHRQNVGLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQARQKS 520

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             ++           + + G+PP GG   GIDR+VM L     +REV  FP
Sbjct: 521 QGDDEAQLIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTNNHTIREVLTFP 571


>gi|4512034|gb|AAD21582.1| aspartyl tRNA synthetase [Drosophila melanogaster]
          Length = 531

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 67/308 (21%), Positives = 120/308 (38%), Gaps = 31/308 (10%)

Query: 17  VGS-FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEIAKSVRSEWVL 71
           VG   V + G VH  R  G   FL +R      Q +            + A ++  E ++
Sbjct: 84  VGKGLVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGDVISKQMVKFAGNIPKESII 143

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--------- 122
            I    ++ S++    +     +ELS ++I ++S A+        +   PE         
Sbjct: 144 DIQAKPVAVSSKI--ESCTEQSLELSVEQIFVISQAKAQLPLQIEDASRPENADDAEGLN 201

Query: 123 -----SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                  R   R LDLR             +    R  +  + F E  TP + +++ EG 
Sbjct: 202 IRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAASEGG 261

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +    S     ++ A  Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF  L
Sbjct: 262 ANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGL 319

Query: 238 DMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           D+EM+F     ++L+T+ N    +F+   +             +   ++Y  D      P
Sbjct: 320 DLEMAFKYHYHEVLHTIGNTFTSIFKGLRDKYAKE-------IESVGQQYKVDAFKFLEP 372

Query: 297 IIMHNVTE 304
            ++    +
Sbjct: 373 PLILQFAD 380



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                 + +  YD+   G EI SG  R H  E +++   +
Sbjct: 423 KFPLAIRPFYTMPD--------PNNPVYSNSYDMFMRGEEILSGAQRIHDPEYLIERAKH 474

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI      ++      +F+ G PPH G   G++R+VML LG  N+R+ S+ P       
Sbjct: 475 HGIDT----SKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMLPRDPKRLT 530

Query: 571 L 571
            
Sbjct: 531 P 531


>gi|327470825|gb|EGF16281.1| asparagine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 448

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 74/362 (20%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKF-------GYELDITDIEIIGESNDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F R+ YD+AI      
Sbjct: 242 HDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAIDLLQAH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L N     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 302 ENDEDADYEHLENGDDFGSPHETWISNHFGVPTFVVNYPAAIKAFYMKPVPGNPDRVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 26/140 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +++++P             A   F M    G  + +   DLL+ + +         EI
Sbjct: 333 PTFVVNYP------------AAIKAFYMKPVPGNPDRVLCADLLAPEGYG--------EI 372

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R    + ++   +++G+     E          + G  PHGG   GI+R+V  + 
Sbjct: 373 IGGSMREEDYDALVAKMNDLGMDTTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFVA 428

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G K++RE   FP   +    
Sbjct: 429 GTKHIREAIPFPRMLHRIKP 448


>gi|170754606|ref|YP_001780645.1| aspartyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169119818|gb|ACA43654.1| aspartyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 429

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 69/328 (21%), Positives = 136/328 (41%), Gaps = 24/328 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +   V L GW+H++R    I FL IRD  G+ Q + + D         V+ E ++ + G+
Sbjct: 13  INENVNLQGWIHKIRKLKNITFLIIRDRSGLIQCIVDNDKL---DLSQVKIESIVSMTGV 69

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYPESIRFKYRFLDLR 134
           V   +             E+  + +EI++ A +       +   E         R L LR
Sbjct: 70  VKESTNALNP-------FEIQVENLEIINAALDKVPIEINKENLEINLDTMLNNRILSLR 122

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
              ++     +  I+N  R  +  E F E  TP +     EG  +          ++ A 
Sbjct: 123 HPKVNSIFKVQNSIVNGFREFLNKEEFTEIYTPKIVWEGAEGGTEVFKVKYFENTAYLA- 181

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTM 253
            Q+PQ YKQ+++ +GF++ F+I   +R E+  ++R   E+  +D+E+ F+E + DI+   
Sbjct: 182 -QSPQFYKQMMVGAGFEKVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDEKDIMEVE 240

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           E +L+ + E+ +       + L    D  + +  ++ P +     +  +++ +  +    
Sbjct: 241 ERLLKFILEKLNKECKEYFDLL----DSELPKIESEIPKITFKEALDILSKEYNKNNLTC 296

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFC 341
                 ++P  E           N  F 
Sbjct: 297 -----DLDPEGEKLICKYAKEKLNSDFI 319



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 81/213 (38%), Gaps = 16/213 (7%)

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  DE   +     + K +     +  +   D+ D +     +  P      A D  +
Sbjct: 227 IGFIEDEKDIMEVEERLLKFILEKLNKECKEYFDLLDSELPKIESEIPKITFKEALDILS 286

Query: 419 HIAQELGI---INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
               +  +   ++    +          ++ +E+   DF     T        +    L 
Sbjct: 287 KEYNKNNLTCDLDPEGEKLI-------CKYAKEKLNSDFIFL--TNYPREKRPMYTMPLG 337

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
                 +DL+  G EI +GG R H   +++      G + +  E+       AF+ GMP 
Sbjct: 338 KDGTHSFDLLFRGIEITTGGQRIHDYNMLVDNIDFKGFNPKDYES----YLSAFKYGMPK 393

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           HGG+A G++R+   LLG +NVRE +L    +  
Sbjct: 394 HGGLAIGLERLTSRLLGLENVREAALITRDRTR 426


>gi|88860264|ref|ZP_01134902.1| lysyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88817462|gb|EAR27279.1| lysyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 511

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 70/368 (19%), Positives = 142/368 (38%), Gaps = 49/368 (13%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           ++   S  +L        V ++G +   R      F  ++D  G  Q  A+ D+      
Sbjct: 47  KFGDKSKEELTELH--HEVAIAGRILAKRGP----FFLLQDMKGRIQAYASKDAQ----- 95

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +++++     G ++S       +    G + +   + ++L+ +   PLP        +
Sbjct: 96  QDLKAKYGQLDIGDIISVKGPLNKSG--KGDLYVDMVEYQLLTKSLR-PLPEKFHGLSDQ 152

Query: 123 SIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             +++ R++DL  +    +    R+++I+ +R  ++  +F+E  TP+L        AR F
Sbjct: 153 ETKYRQRYVDLITNMDTRETFRIRSKVIDGIRRFLVDRDFMEVETPMLHIIPGGASARPF 212

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++  
Sbjct: 213 VTHHNALDIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMIEFY 270

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGN-------------------TVSNNFLRICYDD 281
            ++ +  D++N  E++LR V ++                             F R+   D
Sbjct: 271 QAYADYIDMMNLTEDMLRTVAQDVLGTTLIVNTVKNADGEVTDTIEYDFGQPFTRLSMSD 330

Query: 282 AIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
           AI +Y  D      P +  +   H        F ++ +      V        G  +  C
Sbjct: 331 AILKYNPDF----KPEVFKDPENH--------FEELKAYAKQLHVKIPENCVWGPGKFLC 378

Query: 342 DRMNEWAR 349
           +   E A 
Sbjct: 379 EIFEETAE 386



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 5/128 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E K I         P       + ND       +++    G E+A+G    + ++
Sbjct: 381 FEETAEHKLIQPT-FITEYPWEVSPLARRNDENGFITDRFEFFVGGRELANGFSELNDAQ 439

Query: 503 VMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + FS     K+  ++          RA + G+PP  G   GIDR+VML   +  +++
Sbjct: 440 DQAERFSRQVEEKDAGDDEAMHYDEDYIRALEFGLPPTAGEGIGIDRLVMLFTNSSTIKD 499

Query: 559 VSLFPMSQ 566
           V LFP  +
Sbjct: 500 VLLFPHMR 507


>gi|117619714|ref|YP_856024.1| asparaginyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|166231656|sp|A0KIC3|SYN_AERHH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|117561121|gb|ABK38069.1| asparaginyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 466

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 64/388 (16%), Positives = 120/388 (30%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVLC 72
           VG+   + GW+   R    GI FL I D      V A   +           + +   + 
Sbjct: 16  VGTTQTVKGWIRTRRDSKAGISFLAISDGSCFHPVQAVVPNTLANYENEVLRLTTACSVE 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G+V +               EL A +++++   E+        + +      +   L 
Sbjct: 76  VTGVVAASQGSGQA-------FELQATEVKVVGWVEDPDTYPMAAKRHSIEYLREQGHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R + +      R  +  ++      + ++  + P++TAS  EGA +    S ++  +  
Sbjct: 129 ARTNMVGAVTRVRNCLSQAIHRFFHEQGYLWIAAPLITASDTEGAGEMFRVSTLDMENLP 188

Query: 193 ALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
             P     Y +                    A    + +   P FR E+  + R   EF+
Sbjct: 189 RTPAGKVDYDKDFFGKETFLTVSGQLNVETYACALSKVYTFGPTFRAENSNTSRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-------------------- 275
            ++ E++F + +D     E +L+ VF            F                     
Sbjct: 249 MVEPEVAFADLEDNAALAEAMLKYVFNAVLAERRDDLEFFAQHVDKDAIGRLERFVASDF 308

Query: 276 -RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH  +     F   + V    +       
Sbjct: 309 AQIDYTDAIEVLKNCGKKFEFPVSWGIDLSSEHERYLAEEHFKSPVVVKNYPKDI----- 363

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 364 KAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 70/210 (33%), Gaps = 33/210 (15%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN---------- 428
           L     + +   +  +  D   F A    K           +A +   I+          
Sbjct: 265 LAEAMLKYVFNAVLAERRDDLEFFAQHVDK--DAIGRLERFVASDFAQIDYTDAIEVLKN 322

Query: 429 -CNCFEF--CWIMDFPFYEWNEEEKKIDFAHNPFTM----PQGGMES---LKGNDLLSIK 478
               FEF   W +D      + E ++     +  +               ++ ND     
Sbjct: 323 CGKKFEFPVSWGID-----LSSEHERYLAEEHFKSPVVVKNYPKDIKAFYMRLNDDGKTV 377

Query: 479 AFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           A   D++  G  EI  G  R    +V+    + +G++K      +       + G  PH 
Sbjct: 378 A-AMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNK----EDYWWYRDLRRYGTVPHS 432

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G   G +R+V+ + G  NVR+V  FP +  
Sbjct: 433 GFGLGFERLVVYVTGMGNVRDVIPFPRTPR 462


>gi|118471596|ref|YP_890315.1| lysyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118172883|gb|ABK73779.1| lysyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 507

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 20/270 (7%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPD 55
           RTH+  +L  +          G  V +SG V   R  G + F  +++  G   QV+ +  
Sbjct: 44  RTHTLAELRRAHPDLAADTATGQIVGVSGRVVFARNSGKLCFATLQEGDGTQLQVMISLA 103

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   S +S+  L   G ++    E I++    G++ + A + ++   A+ L     
Sbjct: 104 QVGQEALDSWKSDVDL---GDIVFVHGEVISSK--RGELSVLADRWQM--AAKALRPLPV 156

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL  R        +R  ++ ++R  +    F+E  TP+L   + 
Sbjct: 157 AHKEMSEEARVRQRYVDLIVRPEARTIARQRVAVVRAVRSALERRGFLEVETPMLQTLAG 216

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  GF++ F++   FR+E   S   P E
Sbjct: 217 GAAARPFITHSNALDIDLY-LRIAPELFLKRCLVGGFEKVFELNRNFRNEGVDSTHSP-E 274

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++ + +D       +++ V +E
Sbjct: 275 FAMLETYQAYGDYNDSATVTRELIQEVADE 304



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 57/174 (32%), Gaps = 39/174 (22%)

Query: 407 LKFCSFAADARNHIAQELG-----IINC--------NCFEFCWIMDFPFYEWNEEEKKID 453
            K    A      I ++ G     +I            +   ++ DFP      E   + 
Sbjct: 349 EKLWQIADRLEVEIPRDRGYGHGKLIEELWEHTVGDKLWAPTFVRDFPV-----ETTPLT 403

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
            AH                  +     ++DL    FE+A+G        +  + F     
Sbjct: 404 RAHR----------------SIPGVTEKWDLYVRKFELATGYSELIDPVIQRERFEAQAR 447

Query: 514 SKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +    ++           A +  MPP  G   GIDR++M L G  ++RE  LFP
Sbjct: 448 AAAAGDDEAMVLDEDFLAALEFAMPPTTGTGMGIDRLMMALTGL-SIRETVLFP 500


>gi|270157788|ref|ZP_06186445.1| asparaginyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289163943|ref|YP_003454081.1| asparagine tRNA synthetase [Legionella longbeachae NSW150]
 gi|269989813|gb|EEZ96067.1| asparaginyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288857116|emb|CBJ10931.1| asparagine tRNA synthetase [Legionella longbeachae NSW150]
          Length = 467

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/395 (15%), Positives = 129/395 (32%), Gaps = 59/395 (14%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA---NPDSACFEIAKSV 65
           G++    V  +V + GWV   R    G+ F+ + D    + +     +  +   +    +
Sbjct: 13  GEIS---VDEYVTVRGWVKTRRDSKAGLSFISMHDGSCFSPIQIVATDKLTNYHDDVAKL 69

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L + G +++   +           E+ A+++ ++   E         + +     
Sbjct: 70  TAGCSLIVSGKLVASQGKGQT-------FEIQAEQVIVVGWVENPDTYPIQAKRHTLEFL 122

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            +   L  R +T+      R  +  ++      + F    TPI+T+S  EGA +    S 
Sbjct: 123 REVAHLRPRTNTISAVTRIRHCLSQAIHRFFHEQGFFWIHTPIITSSDCEGAGEMFRVST 182

Query: 186 VNQ--------------GSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           ++                 F+          Q           + +   P FR E+  + 
Sbjct: 183 LDLLNVPKGEQGQIDFSKDFFGRETFLTVSGQLNVEAYCLAMSKVYTFGPTFRAENSNTS 242

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------G 267
           R   EF+ ++ E++F    D+ +  +++LR + +                          
Sbjct: 243 RHLAEFWMVEPEIAFAGLSDLCDLSQSMLRYLCKVVLEERADDMDFFNQFVAPGCIERVE 302

Query: 268 NTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYE 325
           +   +NF  + Y DAI+     +     P+   +   +EH  +      ++I    P   
Sbjct: 303 HIAESNFEIMTYTDAIKILEKSEQSFDFPVSWGLDLQSEHERY-----LAEIHCKKPVIL 357

Query: 326 VWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                   G   R   D     A     PG+  I 
Sbjct: 358 TNYPQEIKGFYMRLNDDEKTVAAMDVLAPGIGEII 392



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 58/153 (37%), Gaps = 14/153 (9%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAH----NPFTMPQGGMESL---KGNDLLSIK 478
           I+  +   F + + +     +E E+ +   H       T     ++       +D  ++ 
Sbjct: 320 ILEKSEQSFDFPVSWGLDLQSEHERYLAEIHCKKPVILTNYPQEIKGFYMRLNDDEKTVA 379

Query: 479 AFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           A   D++  G  EI  G  R    +V+ +      ++K      +       + G  PH 
Sbjct: 380 AM--DVLAPGIGEIIGGSEREDRLDVLDRRIEESNLNK----ESYQWYRDLRRYGTVPHA 433

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G   G++R V  + G  NVR+V  FP +    D
Sbjct: 434 GFGLGLERFVSYVTGLGNVRDVIPFPRTPGHAD 466


>gi|302918070|ref|XP_003052579.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733519|gb|EEU46866.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 609

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 115/294 (39%), Gaps = 14/294 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSA------CFEIAKSV 65
           G S     +++   VH  R  G  ++F D+R      Q++              +  + +
Sbjct: 118 GESVQDKIIQIGARVHGKRASGSKLLFYDVRTEGVKVQILCQAQEVREGAPAFEDQHEHL 177

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           R   ++ I G     + +        G++ + A ++ +L+      LP           R
Sbjct: 178 RRGDIIGIIGYPGRTAPKNKIEKGEEGELSIFATEVVLLTPCL-HALPDDHYGFKDLEQR 236

Query: 126 FKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           F+ R+LDL   +      V R+++I  +R      +F+E  TP++   +           
Sbjct: 237 FRKRYLDLICNEKARNVFVTRSKMITWIRRYFDERDFVEVETPMMNQIAGGATAKPFTTH 296

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                    +  AP+ Y ++L+  G +R ++I   FR+E       P EF  ++   ++ 
Sbjct: 297 HNEYDMQMYMRVAPELYLKMLVVGGLNRVYEIGRQFRNEGADLTHNP-EFTTIEFYQAYA 355

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           + +D+++  E+++ G+ +  + G   + +               +KP  R  +I
Sbjct: 356 DVNDLMDITEDMVSGLVKYLTGGYVTTFH----TQSGEKYEVNWEKPWPRYEMI 405



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 4/92 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++      EIA+     +        F      K+  ++           + + 
Sbjct: 488 PGLCERFEAFVCKKEIANAYTELNDPFDQRLRFEEQARQKDQGDDEAQLIDENFCTSLEY 547

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP GG   GIDR+VM L     +REV  FP
Sbjct: 548 GLPPTGGWGMGIDRMVMFLTDNYTIREVLAFP 579


>gi|149190811|ref|ZP_01869076.1| asparaginyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148835373|gb|EDL52345.1| asparaginyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 466

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 127/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNN----LNNYENEVLKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  +   + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGTIVESPAKGQDFELAATDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++        
Sbjct: 132 NVIGAVARVRNCLSQAIHRFYHEQGYFWMSAPLITASDAEGAGEMFRVSTLDMANLPLTE 191

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 QGDVDFNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F + DD     E++L+ VF+                            V ++F ++
Sbjct: 252 PEVAFADLDDAAKLAEDMLKYVFKAVLEERRDDLEFFAQRINKEAITRLEKFVESDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI+       +   P+   +   +EH  +     F+  + V    +          
Sbjct: 312 DYTDAIQILLDSGKEFEFPVEWGIDMSSEHERYLAEEHFNAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRMNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 6/99 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    E++ +    +GI                +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLELLDKRMVEMGIDP----EHMSWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G  PH G   G +R+V  + G  N+R+V  FP +    
Sbjct: 426 YGTVPHSGFGLGFERLVSYVTGMANIRDVIPFPRAPRSA 464


>gi|197117272|ref|YP_002137699.1| asparaginyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197086632|gb|ACH37903.1| asparaginyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 461

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 74/380 (19%), Positives = 133/380 (35%), Gaps = 56/380 (14%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L     G  + L GW   VR   G+ F+ + D   +   QVVA P+ A +   
Sbjct: 4   RTRVKQALSEGRPGETLLLKGWARTVRTGKGVTFISLNDGSTLAGIQVVAEPELANYAEV 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++ +   L + G++    A          ++EL A  +E++  A++   P+  +R   E
Sbjct: 64  AALGTGSALTVTGVLQESPAAG-------QELELKALSVEVVGTADQ-EYPMQKKRHSFE 115

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R     + +R +T       R+ +   +        F+   TPI+TA+  EGA +   
Sbjct: 116 YLR-TIAHMRVRSNTFGAVFRVRSALAQEVHRFFAERGFLYVHTPIITANDCEGAGELFR 174

Query: 183 PSRVNQG-------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
            + ++                F+A         Q +  L A  F   +   P FR E+  
Sbjct: 175 VTTLDLNNPPRVEGEIDFAQDFFAKATGLTVSGQLEGELFAQAFSDIYTFGPTFRAENSN 234

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL----------- 275
           + R   EF+ ++ EM+F +  D  +  E  L+ +     +       F            
Sbjct: 235 TARHAAEFWMIEPEMAFADLSDDADLAEAFLKRLCRFALDNCDDDMRFFNAQIDKGLIER 294

Query: 276 ----------RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
                     R+ Y +AI R        + P+   +   +EH  +   +V      V   
Sbjct: 295 IEGVAQASFARMDYGEAIERLKKAPVSFQFPVEWGLDLQSEHERYLTEQV------VGGP 348

Query: 324 YEVWAIPAKGGGGNRAFCDR 343
             +   P           D 
Sbjct: 349 VFIMNYPKDIKAFYMRLNDD 368



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 54/289 (18%), Positives = 93/289 (32%), Gaps = 20/289 (6%)

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE----WARS 350
             +   ++           F++           +   +G    +AF D         A +
Sbjct: 173 FRVTTLDLNNPPRVEGEIDFAQDFFAKATGLTVSGQLEGELFAQAFSDIYTFGPTFRAEN 232

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG------ 404
                 A  FW ++     A +   A           R  LD  D D  FF A       
Sbjct: 233 SNTARHAAEFWMIEPEMAFADLSDDADLAEAFLKRLCRFALDNCDDDMRFFNAQIDKGLI 292

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID---FAHNPFTM 461
           + ++  + A+ AR    + +  +      F + +++     +E E+ +         F M
Sbjct: 293 ERIEGVAQASFARMDYGEAIERLKKAPVSFQFPVEWGLDLQSEHERYLTEQVVGGPVFIM 352

Query: 462 PQGGMES---LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
                     ++ ND     A    LV    EI  G  R    E ++     VGI     
Sbjct: 353 NYPKDIKAFYMRLNDDGRTVAAMDLLVPKVGEIIGGSQREERLEPLIGRMMEVGIEP--- 409

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                      + G  PH G   G +R++M L G +N+R+V  FP +  
Sbjct: 410 -ESLSWYLDTRRWGSTPHAGFGLGFERLIMYLTGMENIRDVIPFPRTPR 457


>gi|119511071|ref|ZP_01630191.1| lysyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119464322|gb|EAW45239.1| lysyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 467

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 62/308 (20%), Positives = 128/308 (41%), Gaps = 38/308 (12%)

Query: 51  VANPDSACFEIAKSV-RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
           +A+ D+  F   K +  +  +L + G +              G++ +  ++  IL+ +  
Sbjct: 1   MADVDADAFSHLKQLTDAGDILGVKGTIKRTEK---------GELSVYVKEYSILTKSL- 50

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRT-RIINSMRCRMIAENFIECSTPI 168
           LPLP         + R++ R++DL  +   +   +R  +I   +R  +   +F+E  TP+
Sbjct: 51  LPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRRRAQITAGIRRYLTERDFLEIETPV 110

Query: 169 LTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L + +    AR F+          Y L  A + + + L+  GF++ F++   FR+E   +
Sbjct: 111 LQSEAGGADARPFVTYHNTLDMQLY-LRIATELHLKRLIVGGFEKVFELGRIFRNEGVST 169

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
              P EF  +++  ++ +  D++   E ++  V +E           L+I        Y 
Sbjct: 170 RHNP-EFTSIEVYQAYADYHDMMALTEGIITTVAQEVLG-------TLQIT-------YQ 214

Query: 288 TDKPDLRNP---IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA------IPAKGGGGNR 338
               DL  P   + MH++ + +   +F  FS +       +         +P+ G   N 
Sbjct: 215 GTPIDLSAPWRRVTMHDLVKEYTGLDFNSFSTLEEAKAASKNAGLHGIEDVPSMGKLLNA 274

Query: 339 AFCDRMNE 346
           AF  ++ E
Sbjct: 275 AFEQKIEE 282



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 47/141 (33%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           I  N  +  +++D+P      E   +   H                        +++L  
Sbjct: 280 IEENLIQPTFVIDYPV-----EISPLAKPHR----------------SQPGLVERFELFI 318

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAG 542
            G E A+            +        K       +        A + GMPP GG+  G
Sbjct: 319 VGRETANSFSELTDPVDQRERLEAQAALKAAGDLEAQGVDEDFITALEYGMPPTGGLGIG 378

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR+VMLL    ++R+   FP
Sbjct: 379 IDRLVMLLTDCASIRDAIAFP 399


>gi|317179988|dbj|BAJ57774.1| lysyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 501

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 11/246 (4%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+   
Sbjct: 59  SIVGRVKLLRLMGKACFIKIEDESTILQAYISQNELNDE-FKSLKKH--LEVGDIVL--- 112

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            +       TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K+
Sbjct: 113 VKGFPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKD 171

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           + K R+ I++S+R     E F+E  TP++        AR F+      +   Y L  AP+
Sbjct: 172 VFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALEIERY-LRIAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++   + +   
Sbjct: 231 LYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLIELSKRLFDY 289

Query: 260 VFEEFS 265
           + +  +
Sbjct: 290 LLKTLN 295



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL GAK++++V LFP
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|300812409|ref|ZP_07092839.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496576|gb|EFK31668.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 432

 Score =  174 bits (442), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 71/324 (21%), Positives = 119/324 (36%), Gaps = 28/324 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   VR+  W+   R  G I+FL +RD     Q V   +      FE AK +R E 
Sbjct: 10  SAKHVDEEVRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              + G +   +             E+    +E++S  E         +E+       +R
Sbjct: 70  SFYLTGTIHEDARSHF-------GYEIQISDLEVVSNNE---GYPITNKEHGIDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R RI  +       E F++  TP+L  S+PEG  +       +  
Sbjct: 120 HLWLRSRRPFAIMQIRNRIFKATVDFFENEGFVKFDTPLLMHSAPEGTTELFHIDYFDHD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y   + A  F + F   P FR E  ++ R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEVGAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           L+  E  L  V  +                +  +   G D   LR P    N T      
Sbjct: 237 LDLQERFLSYVVGQVLEH-----------CEYELSILGRDLDKLR-PAAEGNYTRLSYDD 284

Query: 310 EFRVFSKILSVNPGYEVWAIPAKG 333
             ++  +        + +  P + 
Sbjct: 285 AVKMLQEAGKDFKWGDDFGAPDEA 308



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 22/181 (12%)

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
             +G+       D +K    A         + G  +       +  D PF+  N      
Sbjct: 272 AAEGNYTRLSYDDAVKMLQEAGK-DFKWGDDFGAPDEAFLSEQF--DRPFFIVN-----Y 323

Query: 453 DFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
             A  PF M +      +    D+ + + +         EI  G  R    + +      
Sbjct: 324 PVAIKPFYMKKNPENPLTYLCADVEAPEGYG--------EIMGGSEREADYDTLKAQIEE 375

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G++     + +       + G  PH G   G +R++  +    +VRE   FP   N   
Sbjct: 376 AGLNL----DDYSWYLDLRKYGSVPHSGFGMGFERVIAWICKLDHVREAVPFPRMINRMQ 431

Query: 571 L 571
            
Sbjct: 432 P 432


>gi|291616925|ref|YP_003519667.1| AsnS [Pantoea ananatis LMG 20103]
 gi|291151955|gb|ADD76539.1| AsnS [Pantoea ananatis LMG 20103]
          Length = 466

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 128/385 (33%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    G+ F+ + D      V A  +++       V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGLSFIAVYDGSCFNPVQAVVNNSLNNYQDEV----LHLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A K+E++   E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASPGQGQAFEIQATKLEVVGWVEDPDSYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++        +   STP++TAS  EGA +    S ++  +     
Sbjct: 132 NLIGAVARVRHTLAQALHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDMENLPRND 191

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           Q    Y +                    AS   + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDYSEDFFGKEAFLTVSGQLNGETYASALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   DD     E +L+ VF+   +                        V+ +F ++
Sbjct: 252 PEIAFASLDDAAALAEAMLKYVFKAVLDERADDMAFFAERVDNDAINRLERFVTTDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+   +   +EH  +   + F   + V    +          
Sbjct: 312 NYTDAVDILMNCGQTFENPVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+      +G+ K      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDARLEEMGLKK----EDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 426 YGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|322385688|ref|ZP_08059332.1| asparagine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321270426|gb|EFX53342.1| asparagine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 448

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 75/365 (20%), Positives = 132/365 (36%), Gaps = 47/365 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
            + VG  V +  WV      G I FL +RD       V   P+             F+  
Sbjct: 12  KNHVGEEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEVGLEKFDTI 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + + G+V                 EL    IEI+  + + P+     +E+  
Sbjct: 72  KRLSQETSVYVTGIVKEDERSKF-------GYELDITDIEIIGESNDYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                 R L LR       +  R  II +         FI+  +PIL+ ++ E + +   
Sbjct: 122 DFLMDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                 G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E +
Sbjct: 182 TDYF--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYN 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRY 286
           FV  D+ L+  E  ++ + +   +                   V+  F R+ YD+AI   
Sbjct: 239 FVTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYVAEPFKRVTYDEAIDLL 298

Query: 287 GTDKPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
              + D       L +     +  E ++ + F V + +++     + + +    G  +R 
Sbjct: 299 QVHENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVVNYPAAIKAFYMKPVPGNPDRV 358

Query: 340 FCDRM 344
            C  +
Sbjct: 359 LCADL 363



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 53/140 (37%), Gaps = 26/140 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +++++P             A   F M    G  + +   DLL+ + +         EI
Sbjct: 333 PTFVVNYP------------AAIKAFYMKPVPGNPDRVLCADLLAPEGYG--------EI 372

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R    + ++   + +G+     E          + G  PHGG   GI+R+V  + 
Sbjct: 373 IGGSMREEDYDALVAKMNELGMDTTEYE----FYLDLRKYGSVPHGGFGIGIERMVTFVA 428

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G K++RE   FP   +    
Sbjct: 429 GTKHIREAIPFPRMLHRIKP 448


>gi|126437708|ref|YP_001073399.1| lysyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|126237508|gb|ABO00909.1| lysyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 512

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 59/270 (21%), Positives = 114/270 (42%), Gaps = 20/270 (7%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTH+  ++          S  G  V ++G V   R  G + F  +++  G          
Sbjct: 49  RTHTLAEVRAAFPDLPVDSQTGEIVGVAGRVVFARNSGKLCFATLQEGDGTQ---LQAMI 105

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +  E+ +     W   +D G ++S   + I++    G++ + A   +I+S A        
Sbjct: 106 SLAEVGQESLDSWKADVDLGDIVSVHGQVISSR--RGELSVLADSWQIISKALRPLP--V 161

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL  R        +R  ++ ++R  +    F+E  TP+L   + 
Sbjct: 162 AHKEMSEEARVRQRYVDLIVRPEARTIARQRVAVVRALRNALERRGFLELETPMLQTLAG 221

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  GF++ F++   FR+E   S   P E
Sbjct: 222 GAAARPFVTHSNALDVDLY-LRIAPELFLKRALVGGFEKVFELNRNFRNEGIDSTHSP-E 279

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++ + +D       +++ V +E
Sbjct: 280 FAMLETYQAYGDYNDSAVVTRELIQEVADE 309



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 26/139 (18%)

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            + +   ++ DFP      E   +  +H                  +     ++DL    
Sbjct: 389 EDLWAPTFVRDFPV-----ETTPLTRSHR----------------SVPGVTEKWDLYVRK 427

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGID 544
           FE+A+G        +  + F     +    ++           A + GMPP  G   GID
Sbjct: 428 FELATGYSELIDPIIQRERFEEQARAAAAGDDEAMVLDDDFLAALEYGMPPSTGTGMGID 487

Query: 545 RIVMLLLGAKNVREVSLFP 563
           R++M L G  ++RE  LFP
Sbjct: 488 RLLMALTGL-SIRETILFP 505


>gi|167629421|ref|YP_001679920.1| lysyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592161|gb|ABZ83909.1| lysyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 264

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 98/227 (43%), Gaps = 13/227 (5%)

Query: 5   RTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH   D+     +     VRL+G +   R  G   F +++D  G  Q+    D    E+
Sbjct: 38  RTHHAEDIKAGFDALENQTVRLAGRMMARRHQGKAGFGNLQDITGQIQIYVRRDDVGHEV 97

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +      +  I G+      E        G+I +  ++  +L+ +   PLP        
Sbjct: 98  FELFAKADIGDIYGV------EGHVFKTQKGEISIWVKQFVLLTKSLR-PLPEKFHGLKD 150

Query: 122 ESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
             +R++ R+LDL  +  + +  V R++II ++R  +    ++E  TP+L   +    AR 
Sbjct: 151 VELRYRQRYLDLIMNPEVKRTFVLRSKIIRAVREFLDERGYLEVETPVLHPIAGGATARP 210

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           F+          Y +  A + + + L+  GF+R +++   FR+E  R
Sbjct: 211 FITHHNALDMKLY-MRIALELHLKRLIVGGFERVYELGRIFRNEGSR 256


>gi|108801721|ref|YP_641918.1| lysyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119870872|ref|YP_940824.1| lysyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|108772140|gb|ABG10862.1| lysyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119696961|gb|ABL94034.1| lysyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 512

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 59/270 (21%), Positives = 114/270 (42%), Gaps = 20/270 (7%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTH+  ++          S  G  V ++G V   R  G + F  +++  G          
Sbjct: 49  RTHTLAEVRAAFPDLPVDSQTGEIVGVAGRVVFARNSGKLCFATLQEGDGTQ---LQAMI 105

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +  E+ +     W   +D G ++S   + I++    G++ + A   +I+S A        
Sbjct: 106 SLAEVGQESLDSWKADVDLGDIVSVHGQVISSR--RGELSVLADSWQIISKALRPLP--V 161

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL  R        +R  ++ ++R  +    F+E  TP+L   + 
Sbjct: 162 AHKEMSEEARVRQRYVDLIVRPEARTIARQRVAVVRALRNALERRGFLELETPMLQTLAG 221

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  GF++ F++   FR+E   S   P E
Sbjct: 222 GAAARPFVTHSNALDVDLY-LRIAPELFLKRALVGGFEKVFELNRNFRNEGIDSTHSP-E 279

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++ + +D       +++ V +E
Sbjct: 280 FAMLETYQAYGDYNDSAVVTRELIQEVADE 309



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 26/139 (18%)

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            + +   ++ DFP      E   +  +H                  +     ++DL    
Sbjct: 389 EDLWAPTFVRDFPV-----ETTPLTRSHR----------------SVPGVTEKWDLYVRK 427

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGID 544
           FE+A+G        +  + F     +    ++           A + GMPP  G   GID
Sbjct: 428 FELATGYSELIDPIIQRERFEEQARAAAAGDDEAMVLDEDFLAALEYGMPPSTGTGMGID 487

Query: 545 RIVMLLLGAKNVREVSLFP 563
           R++M L G  ++RE  LFP
Sbjct: 488 RLLMALTGL-SIRETILFP 505


>gi|46198664|ref|YP_004331.1| asparaginyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|59798550|sp|Q72KF7|SYN_THET2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|46196287|gb|AAS80704.1| asparaginyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 438

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 59/263 (22%), Positives = 100/263 (38%), Gaps = 14/263 (5%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLC 72
            V   V L GW+++ R  G I FL +RD  G    T V      A F  A  +  E  L 
Sbjct: 11  HVDQEVELRGWLYQRRSKGKIHFLILRDGTGFLQATVVQGEVPEAVFREADHLPQETALR 70

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V              G  EL+ + +++  V+        G +E+       +R L 
Sbjct: 71  VWGRVREDRR-------APGGFELAVRDLQV--VSRPQGEYPIGPKEHGIDFLMDHRHLW 121

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       +  R  +  ++        F+    PILT S+ EG  +      +  G   
Sbjct: 122 LRHRRPFAVMRIRDELERAIHEFFGERGFLRFDAPILTPSAVEGTTELFEVE-LFDGEKA 180

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y     A  F + +   P FR E  ++ R   EF+ ++ E++F+  ++ +  
Sbjct: 181 YLSQSGQLY-AEAGALAFAKVYTFGPTFRAERSKTRRHLLEFWMVEPEVAFMTHEENMAL 239

Query: 253 MENVLRGVFEEFSNGNTVSNNFL 275
            E ++  +        +     L
Sbjct: 240 QEELVSFLVARVLERRSRELEML 262



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 14/117 (11%)

Query: 451 KIDFAHNPFTMPQG--GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           +       F M       E +  +DLL+ + +         EI  G  R H  E++ +  
Sbjct: 328 RYPARIKAFYMEPDPEDPELVLNDDLLAPEGYG--------EIIGGSQRIHDLELLRRKI 379

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
              G+     E  +       + G  PH G   G++R V  + G  +VRE   FP  
Sbjct: 380 QEFGLP----EEVYDWYLDLRRFGSVPHSGFGLGLERTVAWICGLAHVREAIPFPRM 432


>gi|261837632|gb|ACX97398.1| lysyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 501

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 66/282 (23%), Positives = 119/282 (42%), Gaps = 19/282 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+   
Sbjct: 59  SIVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDE-FKSLKKH--LEVGDIVL--- 112

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            +       TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K+
Sbjct: 113 VKGFPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKD 171

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           + K R+ I++S+R     E F+E  TP++        AR F+      +   Y L  AP+
Sbjct: 172 VFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALEIERY-LRIAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++   + +   
Sbjct: 231 LYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLIELSKRLFDY 289

Query: 260 VFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           + +          ++     N    I Y DA+   G    D+
Sbjct: 290 LLKTLNLPSKIIYNDMEVDFNQTSVISYLDALETIGGISKDI 331



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL GAK++++V LFP
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|55980677|ref|YP_143974.1| asparaginyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|66774175|sp|P54263|SYN_THET8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|55772090|dbj|BAD70531.1| asparaginyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 438

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 59/263 (22%), Positives = 100/263 (38%), Gaps = 14/263 (5%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLC 72
            V   V L GW+++ R  G I FL +RD  G    T V      A F  A  +  E  L 
Sbjct: 11  HVDQEVELRGWLYQRRSKGKIHFLILRDGTGFLQATVVQGEVPEAVFREADHLPQETALR 70

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V              G  EL+ + +++  V+        G +E+       +R L 
Sbjct: 71  VWGRVREDRR-------APGGFELAVRDLQV--VSRPQGEYPIGPKEHGIDFLMDHRHLW 121

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       +  R  +  ++        F+    PILT S+ EG  +      +  G   
Sbjct: 122 LRHRRPFAVMRIRDELERAIHEFFGERGFLRFDAPILTPSAVEGTTELFEVE-LFDGEKA 180

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y     A  F + +   P FR E  ++ R   EF+ ++ E++F+  ++ +  
Sbjct: 181 YLSQSGQLY-AEAGALAFAKVYTFGPTFRAERSKTRRHLLEFWMVEPEVAFMTHEENMAL 239

Query: 253 MENVLRGVFEEFSNGNTVSNNFL 275
            E ++  +        +     L
Sbjct: 240 QEELVSFLVARVLERRSRELEML 262



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 14/117 (11%)

Query: 451 KIDFAHNPFTMPQG--GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           +       F M       E +  +DLL+ + +         EI  G  R H  E++ +  
Sbjct: 328 RYPARIKAFYMEPDPEDPELVLNDDLLAPEGYG--------EIIGGSQRIHDLELLRRKI 379

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
              G+     E  +       + G  PH G   G++R V  + G  +VRE   FP  
Sbjct: 380 QEFGLP----EEVYDWYLDLRRFGSVPHSGFGLGLERTVAWICGLAHVREAIPFPRM 432


>gi|291384180|ref|XP_002708714.1| PREDICTED: asparaginyl-tRNA synthetase 2, mitochondrial
           [Oryctolagus cuniculus]
          Length = 477

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 56/264 (21%), Positives = 110/264 (41%), Gaps = 19/264 (7%)

Query: 12  LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           L      G  V++ GW+  VR    ++FL I D   +  +    D++     + +     
Sbjct: 34  LRAQHTSGERVKVQGWIRSVRSQKEVLFLHINDGSSLESLQIVADASF--DCRELAFGSS 91

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++   A+  N       +EL A+ I ++   +    P+  +  +P     +Y  
Sbjct: 92  VEVQGQLVKSPAKRQN-------VELKAENITVIGNCDAKAFPIKYKERHPLEYLRQYPH 144

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-----R 185
           L  R + L   +  R+    ++        F+   TP++T++  EGA +          +
Sbjct: 145 LRCRTNVLGSILRVRSEATAAIHSFFKDRGFVHIHTPVITSNDCEGAGELFQVEASSKIK 204

Query: 186 VNQGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +G+F+ +P       Q    +M+  F + F   P FR E+ +S R   EFY ++ E+S
Sbjct: 205 APEGNFFDVPTFLTVSGQLHLEVMSGAFAQVFTFGPTFRAENSQSRRHLAEFYMVEAEIS 264

Query: 243 FVEQ-DDILNTMENVLRGVFEEFS 265
           F+E   D+   ME++ +       
Sbjct: 265 FIENLQDLTQIMEDLFKSTAMMVL 288



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 25/137 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             +I+++P             A  PF M                 A   DL+  G  E+ 
Sbjct: 363 PVFIINYPL------------ALKPFYMRDNED------GPQHTVA-AVDLLVPGVGELF 403

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G +R      + Q  +  G+++      +       + G  PHGG   G +R +  +LG
Sbjct: 404 GGSLREERYHFLEQQLARSGLTEA-----YQWYLELRRFGSVPHGGFGMGFERYLQCILG 458

Query: 553 AKNVREVSLFPMSQNFC 569
             N+++V  FP   + C
Sbjct: 459 VDNIKDVIPFPRFTHSC 475


>gi|195977860|ref|YP_002123104.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225868802|ref|YP_002744750.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp.
           zooepidemicus]
 gi|195974565|gb|ACG62091.1| asparaginyl-tRNA synthetase AsnS [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225702078|emb|CAW99706.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp.
           zooepidemicus]
          Length = 448

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 70/365 (19%), Positives = 134/365 (36%), Gaps = 47/365 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
              VG  V +  WV      G I FL +RD       V   P+          +A F+  
Sbjct: 12  KDHVGQEVTVGAWVANKSGKGKIAFLQLRDGSAFFQAVAFKPNLIQAFGEEAGAAKFDTI 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +  E  + + G+V   +             EL    +E++  +++ P+     +E+  
Sbjct: 72  RHLSQETSVLVKGIVKEDARSKF-------GYELDITDLEVIGDSKDYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                +R L LR       +  R  II +         FI+  +PIL+ ++ E   +   
Sbjct: 122 DFLMDHRHLWLRSRRQAAIMQIRNAIIYASYEFFDQNGFIKFDSPILSGNAAENTTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  +F  L Q+ Q Y +  M     R F   P FR E  ++ R   EF+ +D E  
Sbjct: 182 TDYFGNPAF--LSQSGQLYLEAGM-MALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYP 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRY 286
           F+  ++ L+  E  ++ + +   +                   ++  F R+ YDDAI   
Sbjct: 239 FLSHEESLDLQEAYVKAMIQGVLDRAPQALELLERDTELLKKYIAEPFKRVSYDDAISLL 298

Query: 287 GTDKPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
                D       +++     +  E ++ + F V + +++    ++ + +    G   R 
Sbjct: 299 QEHSTDDDADYEPIQHGDDFGSPHETWISNYFGVPTFVINYPASFKAFYMKPVPGNEERV 358

Query: 340 FCDRM 344
            C  +
Sbjct: 359 LCADL 363



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVIN-----YPASFKAFYMKPVPGNEERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + +L      G++       +       + G  PH G   G++R+V  
Sbjct: 371 EIIGGSVREDNYDKLLAKIKAEGLNP----EDYDFYLDLRKYGSVPHAGFGLGLERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRLKP 448


>gi|157961855|ref|YP_001501889.1| asparaginyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189083480|sp|A8H467|SYN_SHEPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|157846855|gb|ABV87354.1| asparaginyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 466

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 71/389 (18%), Positives = 128/389 (32%), Gaps = 58/389 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVL 71
           +GS + + GWV   R    GI FL + D      +      N ++   E+ K      V+
Sbjct: 16  IGSQITVRGWVRSRRDSKAGISFLAVYDGSCFDPIQGVVPNNLENYTNEVLKLTAGCSVV 75

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G V+    +           E+   K+E+  + E+        + +      +   L
Sbjct: 76  M-TGEVVESPGQGQA-------FEMQVTKVEVAGLVEDPDTYPMAAKRHSIEHLRELAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--- 188
             R + +      R  +  ++      + +I  STP++TAS  EGA +    S ++    
Sbjct: 128 RPRTNIIGAVARVRNCLSQAIHRFYNEQGYIWVSTPLITASDTEGAGEMFRVSTLDLENL 187

Query: 189 -----------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRTDKGTVDYAEDFFGKESFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNN 273
           + ++ E++F   DD     E++L+  F+                          N V+++
Sbjct: 248 WMVEPEVAFANLDDAAKLAEDMLKYCFKAVLEERRDDLEFFAQRVEKTAIERLENFVTSD 307

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIM-HNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           F +I Y DAI        D    +    ++ +EH  +     F   + V    +      
Sbjct: 308 FAQIDYTDAIEILKACDKDFEYDVEWGIDLHSEHERYLAEEHFKAPVVVKNYPKDI---- 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 364 -KAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 6/99 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+    + + +S    +  +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGAQREERLDVLDARLAEMELS----QEDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G  PH G   G +R+V  + G  N+R+V  FP S    
Sbjct: 426 YGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPRSPKSA 464


>gi|10434271|dbj|BAB14197.1| unnamed protein product [Homo sapiens]
          Length = 190

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 52/220 (23%), Positives = 87/220 (39%), Gaps = 46/220 (20%)

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-----IINCNCFEFC 435
                 +   ++ Q+ D     AG+  K CS     R   A  L      + +   F F 
Sbjct: 2   ESQRLELIRLMETQEEDVVLLTAGEHNKACSLLGKLRLECADLLETRGVVLRDPTLFSFL 61

Query: 436 WIMDFPFYEWNEEEKK-IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
           W++DFP +   EE  + ++ AH+PFT P      L   +                     
Sbjct: 62  WVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTEPKK------------------ 103

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
                  +++                    L +A   G PPHGGIA G+DR++ L+ G+ 
Sbjct: 104 ----EDVKML------------------SHLLQALDYGAPPHGGIALGLDRLICLVTGSP 141

Query: 555 NVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           ++R+V  FP S    DL+  +P +V  E+L+   +R+ + 
Sbjct: 142 SIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRVSKP 181


>gi|261839046|gb|ACX98811.1| lysyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 501

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 66/282 (23%), Positives = 119/282 (42%), Gaps = 19/282 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+   
Sbjct: 59  SIVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDE-FKSLKKH--LEVGDIVL--- 112

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            +       TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K+
Sbjct: 113 VKGFPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKD 171

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           + K R+ I++S+R     E F+E  TP++        AR F+      +   Y L  AP+
Sbjct: 172 VFKKRSLIVSSVRKFFETEGFLEVETPMMHPIPGGANARPFITYHNALEIERY-LRIAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++   + +   
Sbjct: 231 LYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLIELSKRLFDY 289

Query: 260 VFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           + +          ++     N    I Y DA+   G    D+
Sbjct: 290 LLKTLNLPSKIIYNDMEVDFNQTSVISYLDALETIGGISKDI 331



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   GMPP  G   GIDR+VMLL GAK++++V LFP  +
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMR 489


>gi|194883504|ref|XP_001975841.1| GG20342 [Drosophila erecta]
 gi|190659028|gb|EDV56241.1| GG20342 [Drosophila erecta]
          Length = 531

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 64/272 (23%), Positives = 110/272 (40%), Gaps = 24/272 (8%)

Query: 17  VGS-FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEIAKSVRSEWVL 71
           VG   V + G VH  R  G   FL +R      Q +            + A ++  E ++
Sbjct: 84  VGKGLVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGDVISKQMVKFAGNIPKESII 143

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--------- 122
            I    ++ S +    +     +ELS ++I ++S A+        +   PE         
Sbjct: 144 DIQAKPVAVSGKI--ESCTEQSLELSVEQIFVISQAKAQLPLQIEDASRPENADDAEGLN 201

Query: 123 -----SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                  R   R LDLR             +    R  +  + F E  TP + +++ EG 
Sbjct: 202 IRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAASEGG 261

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +    S     ++ A  Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF  L
Sbjct: 262 ANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGL 319

Query: 238 DMEMSFV-EQDDILNTMENVLRGVFEEFSNGN 268
           D+EM+F     ++L+T+ N    +F+   +  
Sbjct: 320 DLEMAFKYHYHEVLHTIGNTFTAIFKGLRDKY 351



 Score =  107 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                 + +  YD+   G EI SG  R H +E +++   +
Sbjct: 423 KFPLAIRPFYTMPD--------PNNPVYSNSYDMFMRGEEILSGAQRIHDAEYLMERAKH 474

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI      ++      +F+ G PPH G   G++R+VML LG  N+R+ S+FP       
Sbjct: 475 HGIDT----SKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLT 530

Query: 571 L 571
            
Sbjct: 531 P 531


>gi|317131339|ref|YP_004090653.1| asparaginyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469318|gb|ADU25922.1| asparaginyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 466

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 78/389 (20%), Positives = 132/389 (33%), Gaps = 51/389 (13%)

Query: 1   MHRYRTHSCGDLGVSD--VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           MH  RT        +D    + + ++GWV  +R    I FL++ D      + A     C
Sbjct: 1   MHMQRTEIRDLFARADSFTAADITVAGWVRTLRHSKSIGFLELNDGSCFGHLQA----VC 56

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E A +   E +    G  +                EL A  +EI         P+  +R
Sbjct: 57  DEQALTNFGEVMKLGVGAAVVVRGRLALTPQARQPFELHAASVEIEGTC-PPDYPLQKKR 115

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R     L  R +TL      R+    ++        F    TPI+TAS  EGA 
Sbjct: 116 HTLEFLR-TMPHLRPRANTLGAAFRIRSTAALAIHRFFHTHGFQYIHTPIITASDAEGAG 174

Query: 179 DFLV--------PSRVNQG------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFR 221
           +           P R   G       F+  P +     Q +   MA  F + +   P FR
Sbjct: 175 EMFRLTVLDIADPPRTPDGAVDFSKDFFGRPVSLTVSGQLEGESMALAFGKIYTFGPTFR 234

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------ 275
            E+  + R   EF+ ++ E++F + DD      ++++ V +   +       FL      
Sbjct: 235 AENSNTTRHAAEFWMVEPEIAFADLDDDRALARDMMQAVLKTVLDECPDELAFLNQYVDK 294

Query: 276 ---------------RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKIL 318
                           + Y +A++    +      P+       TEH  +    +F   +
Sbjct: 295 GLLARLEHVATSDFACVTYTEAVKLLEKENARFSYPVSWGCDLQTEHERYLTEEIFKAPV 354

Query: 319 SV---NPGYEVWAIPAKGGGGNRAFCDRM 344
            V       + + +   G G   A  D +
Sbjct: 355 FVVDYPKEIKAFYMRQNGDGKTVAAMDLL 383



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 52/135 (38%), Gaps = 26/135 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              +++D+P     +E K        F M Q G       D  ++ A   DL+  G  EI
Sbjct: 352 APVFVVDYP-----KEIK-------AFYMRQNG-------DGKTVAAM--DLLVPGIGEI 390

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R     V+L     +G+        +       + G   H G   G +R+VM L 
Sbjct: 391 IGGSQREERETVLLTRMEELGMPI----EAYRWYLDLRRFGGARHAGFGLGFERLVMYLT 446

Query: 552 GAKNVREVSLFPMSQ 566
           G  N+R+V  FP + 
Sbjct: 447 GIGNIRDVLPFPRTA 461


>gi|291326404|ref|ZP_06124357.2| asparagine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291314408|gb|EFE54861.1| asparagine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 472

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 125/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VG+ V + GWV   R  + G  FL + D      + A  ++        V    +    G
Sbjct: 22  VGTEVTVQGWVRTRRDSNAGFSFLAVYDGSCFNPLQAIINNNLPNYNDEV----LHLTTG 77

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  +     +       EL A  ++++   E+        + +      +   L  R 
Sbjct: 78  CSVEVTGTVKESPGQGQSFELEATAVKVVGWVEDPDTYPMAAKRHSVEFLREAAHLRPRT 137

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           + +      R  +  ++      + +   STP++TAS  EGA +    S ++        
Sbjct: 138 NLIGAVARVRHTLAQAIHRFFDEQGYFWVSTPVITASDTEGAGEMFRVSTLDYNNLPRDD 197

Query: 190 --------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      A+   + +   P FR E+  + R   EF+ ++
Sbjct: 198 KGEVDFSEDFFGREAFLTVSGQLNGEAYATAISKVYTFGPTFRAENSNTSRHLAEFWMVE 257

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            E++F   DD+    E +L+  F+           F                      ++
Sbjct: 258 PEVAFASLDDVAGLAEKMLKFAFKAALEERRDDLEFFAQRVDKDVINRLESFVNSDFAQV 317

Query: 278 CYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI+   T      NP+    ++ +EH  +   + F   + V    +          
Sbjct: 318 DYTDAIKILETCGQKFENPVYWGVDMSSEHERYLAEQHFKAPVVVKNYPKDI-----KAF 372

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 373 YMRLNEDGKTVAAMDVLAPGIGEII 397



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +++      +G++K      +      
Sbjct: 376 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDMLDARLEEMGMNK----EDYWWYRDL 429

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+V  + G  NVREV  FP +  
Sbjct: 430 RRYGTVPHSGFGLGFERLVAYVTGVGNVREVIPFPRTPR 468


>gi|157363382|ref|YP_001470149.1| lysyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166980071|sp|A8F4K1|SYK_THELT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157313986|gb|ABV33085.1| lysyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 498

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 53/337 (15%), Positives = 118/337 (35%), Gaps = 25/337 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              +  +G V  VR HG   F  I+D YG  Q     +    E     +        G +
Sbjct: 52  DEEISTAGRVMTVRLHGKSCFFTIKDFYGRIQAYIRQNEISEEKYNLFKKYIAP---GDI 108

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RD 136
           +  +         TG++ +  +  ++LS +   PLP        + + ++ R++D+   D
Sbjct: 109 IGITG--FPFKSRTGELTVYVKNFQLLSKS-RRPLPEKWHGLKDKEVAYRQRYVDMIAND 165

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALP 195
           +  +    R   I  +R  +   +F+E  TP+L        A+ F+          Y L 
Sbjct: 166 STLERFRIRYEAIRFIRDFLNRLDFVEVETPVLNFIPGGGAAKPFITRLEALDCEMY-LR 224

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ + +  +  GF++ ++I   FR+E       P EF  +++  ++ + +D++   E+
Sbjct: 225 IAPELHLKRYIVGGFEKVYEIGKNFRNEGISYKHSP-EFTSIEIYQAYADYNDMMELTES 283

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE-HFVHSEFRVF 314
           ++  +         ++              Y   + D + P     + E      +  + 
Sbjct: 284 LISELVLHLYGSYKLT--------------YQGVELDFKPPWKRIKMREFIKSRLDVDIL 329

Query: 315 SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
                                      +++ +    +
Sbjct: 330 EDNDEKLYYVLKERGVEPDTKSREKMIEKLWDLVEEE 366



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 11/126 (8%)

Query: 459 FTMPQGGMESLKG----NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
           F M      S       +D       +++ +  G E+ +     +  +  L+ F      
Sbjct: 372 FLMDHPVDISPLAKRHRDDPR--LTERFEPIIFGMEMGNAFSELNDPDDQLERFKAQLKL 429

Query: 515 KEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM-SQNFC 569
           ++  +           RA + G+PP GG+  GIDR++MLL  + ++R+V  FP+ SQ   
Sbjct: 430 RDAGDEEAHRMDLDFIRALEYGLPPTGGLGIGIDRLIMLLTNSPSIRDVIAFPLVSQTEE 489

Query: 570 DLLMGS 575
           D L GS
Sbjct: 490 DDLEGS 495


>gi|19703392|ref|NP_602954.1| asparaginyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|22096189|sp|Q8RH70|SYN_FUSNN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|19713460|gb|AAL94253.1| Asparaginyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 461

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 70/413 (16%), Positives = 130/413 (31%), Gaps = 56/413 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
           G   +   + L GWV ++R      F+++ D       Q+V       F+    +     
Sbjct: 11  GEDYLDKEIELFGWVRKIRDQKKFGFIELNDGSFFKGVQIVFEEGLENFDEVSRLSIAST 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++               +E+ A+KIEI   A+ L  P+  +R   E +R K   
Sbjct: 71  IKVKGTLVKSEGSG-------QDLEVKAKKIEIFQKAD-LEYPLQNKRHTFEYLRTK-AH 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+ +  ++       NF     PI+T S  EGA +    + ++   
Sbjct: 122 LRARTNTFSAVFRVRSVLAYALHKFFQENNFAYVHAPIITGSDAEGAGEMFRITTLDLNK 181

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q       + F   +   P FR E   + R   E
Sbjct: 182 VPKKENGEVDFSKDFFGKSTNLTVSGQLNLETFCAAFRNVYTFGPTFRAEYSNTARHASE 241

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +   ++   E +++ + +   +       F                   
Sbjct: 242 FWMVEPEIAFGDIFALMELAEAMVKYIIKYVMDNCPEEMEFFNSFIEKGLFDKLNNVLNN 301

Query: 276 ---RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
              R+ Y +AI            P+   +   +EH  +     F K     P +      
Sbjct: 302 DFGRVTYTEAIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYFKK-----PVFVTDYPK 356

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVN 383
                  +   D     A     PG+  I        N   +    K L +  
Sbjct: 357 DIKAFYMKLNEDNKTVRAMDLLAPGIGEIIGGSQREDNYELLTKRMKELGLNE 409



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P        K I      F M           D  +++A   DL+  G  EI
Sbjct: 347 KPVFVTDYP--------KDIKA----FYMK-------LNEDNKTVRAM--DLLAPGIGEI 385

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    E++ +    +G++    E  +       + G  PH G   G +R++M L 
Sbjct: 386 IGGSQREDNYELLTKRMKELGLN----EEDYEFYLDLRRFGSFPHSGYGLGFERMMMYLT 441

Query: 552 GAKNVREVSLFPMSQN 567
           G +N+R+V  FP + N
Sbjct: 442 GMQNIRDVIPFPRTPN 457


>gi|317121888|ref|YP_004101891.1| asparaginyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315591868|gb|ADU51164.1| asparaginyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 430

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 71/298 (23%), Positives = 119/298 (39%), Gaps = 33/298 (11%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIA 62
           T +   +G  + G  V L+GWV+  R  G I FL +RD  G+ Q V + D       E+ 
Sbjct: 2   TVTVAQVGRYE-GQEVELAGWVYNRRSSGRIAFLLLRDGTGVIQCVLSRDRVGDQGLEVF 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +  E    + G+V +            G  EL    +E + VAE+ P      +E+  
Sbjct: 61  EGLTQESSCRVRGVVRADRR-------APGGYELDVTALEPVHVAEDYP---IKLKEHGV 110

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                +R L +R    +  +  R  ++ +    +  E F+    PILT S+PEG  +   
Sbjct: 111 DFLMDHRHLWIRTPRQNAILRVRAAVMAAAAEALAREGFVRVDAPILTPSAPEGTTNLFE 170

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  ++  L Q+ Q Y +        + + + P FR E  ++ R   EF+ L+ E +
Sbjct: 171 TDYFGDKAY--LSQSGQLYMEAA-CMALGKVYCLGPTFRAEQSKTRRHLLEFWMLEPEAA 227

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIR 284
           F   +D +   E ++R V                             F RI YD+A+R
Sbjct: 228 FFTHEDNVALQERLVRQVVLAVLERCPRELETLGRDPEHLRRQVEGPFARITYDEALR 285



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 65/212 (30%), Gaps = 21/212 (9%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC-SFAADARNHIA----- 421
               + P A      +  A++ RL  Q   +        L+         R  +      
Sbjct: 218 EFWMLEPEAAFFTHEDNVALQERLVRQVVLAVLERCPRELETLGRDPEHLRRQVEGPFAR 277

Query: 422 ----QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
               + L I++       W  DF     +E      F    F             +    
Sbjct: 278 ITYDEALRILDERGLGLPWGEDF--GAPHETALSQHFGRPVFVERFPTRVKAFYMEPDPQ 335

Query: 478 K---AFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +   A   DL+      EI  G  R    +++L+     G+S+              + G
Sbjct: 336 RPEVALCADLLAPDGYGEIIGGSQRISDLDLLLRRIDEHGLSR----EALAWYIDLRRYG 391

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             PH G   GI+R V  + G ++VRE   FP 
Sbjct: 392 SVPHAGFGLGIERTVAWICGLEHVREAIPFPR 423


>gi|222480075|ref|YP_002566312.1| aspartyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222452977|gb|ACM57242.1| aspartyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 434

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 82/359 (22%), Positives = 150/359 (41%), Gaps = 36/359 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIA 62
           R H+     V      V ++G VH +R  GG++FL +RD  G+ Q+V     +   FE  
Sbjct: 4   RIHTS---DVEPDADEVAIAGHVHEIRDLGGLVFLIVRDREGLIQIVFKEEREPELFEAV 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-EYP 121
           +   +E V+ + G       + + ++   G +E++  + E++  A+        +  E  
Sbjct: 61  QDAGAEDVVRVVG-------KPLESDQAPGGVEIAPTEYEVIDEADSPLPLEISKDIEVD 113

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            S R   R LDLR+         R++++ +M      E F++  TP+++    EG  +  
Sbjct: 114 LSTRLDNRALDLRKPETLAVFTLRSKLMTAMEEWFDDEGFVDIKTPLISKGGAEGGAELF 173

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                NQ +F  L Q+PQ YKQ+LMASG++  ++    FR ED  + R   E    D+E+
Sbjct: 174 PILYYNQDAF--LSQSPQLYKQMLMASGYEAVYETGTAFRAEDFATSRHVSEIAMFDVEL 231

Query: 242 SFV-EQDDILNTMENVLRGVFEEFSNG------------NTVSNNFLRICYDDA------ 282
           +++ +  D+++  E  LR      +              +   ++F RI +D+A      
Sbjct: 232 AYIDDHHDVMDVQEKSLRHALRAVAENAERELDLLDVDLDVPEDDFPRITFDEALDLLET 291

Query: 283 -IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
               +  D  DL        + +HF       F  +   +  +            +R F
Sbjct: 292 EFGHFPDDPTDLDTKGE-KLLGQHFEEQGHPAFFVVGYPDEKFYYMQDVEGDDIASRKF 349



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 7/122 (5%)

Query: 453 DFAHNPF---TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           +  H  F     P      ++  +   I + ++DL+  G E++SGG R H ++       
Sbjct: 317 EQGHPAFFVVGYPDEKFYYMQDVEGDDIASRKFDLIYKGQELSSGGQREHDAD----RMV 372

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            V   + V    F     A   G PPHGG   GIDR+V  +    N++E  +FP   N  
Sbjct: 373 EVMEEEGVETANFEFYIEALSFGTPPHGGYGLGIDRLVQKVADLDNIKEAIMFPRDPNRL 432

Query: 570 DL 571
           + 
Sbjct: 433 EP 434


>gi|15644811|ref|NP_206981.1| lysyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2501017|sp|P56126|SYK_HELPY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|2313270|gb|AAD07251.1| lysyl-tRNA synthetase (lysS) [Helicobacter pylori 26695]
          Length = 501

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 66/282 (23%), Positives = 120/282 (42%), Gaps = 19/282 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + G V  +R  G   F+ + D   I QV  + +    E  KS++    L +  +V+   
Sbjct: 59  SIVGRVKLLRLMGKACFIKVEDESTILQVYVSQNELNDE-FKSLKKH--LEVGDIVL--- 112

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            +       TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K+
Sbjct: 113 VKGFPFATKTGELSIHALEFHILSKT-IVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKD 171

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           + K R+ I++S+R     E F+E  TP++        AR F+      +   Y L  AP+
Sbjct: 172 VFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALEVERY-LRIAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++   + +   
Sbjct: 231 LYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLIELSKRLFDY 289

Query: 260 VFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           + +          ++     N    I Y DA+   G    D+
Sbjct: 290 LLKTLNLDSKIIYNDMEVDFNQTSVISYLDALETIGGISKDI 331



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL GAK++++V LFP
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|322491581|emb|CBZ26854.1| putative aspartyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 641

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 5/262 (1%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SC + G    G  V +   + R+R  G + FL +R     +           + AKS+  
Sbjct: 124 SCVESGCVREGDEVTVRARLERMRGRGKLAFLHLRQPPLESVQAVCEGKELTKQAKSITP 183

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           E ++ + G+V  R A+T   +      EL    + ++S A       + +       R  
Sbjct: 184 ESIVDVTGVV--RRADTPVQSTTCQGWELQVTALHVVSQAGTPLPFPYHDTNAKLDTRLN 241

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +R +DLR + +       + +  S R  ++A +FIE  TP L  ++ EG  +        
Sbjct: 242 HRVMDLRTEKMIATSRLVSALGQSFRNELLARDFIEVHTPKLLGAASEGGSNVFRVDYFE 301

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + ++ A  Q+PQ +KQ+++     R F++ P FR E+  + R   EF  LD EM   +  
Sbjct: 302 RKAYLA--QSPQLHKQMMVMGDAMRVFEVGPVFRAENSLTHRHLTEFVGLDGEMVVKDSH 359

Query: 248 -DILNTMENVLRGVFEEFSNGN 268
            ++L+ +E V+  V    +  +
Sbjct: 360 TEVLDVLEPVMCAVLAHLTQQH 381



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 24/152 (15%)

Query: 422 QELG-IINCNCFEFCWIMD-FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + LG +I        +++D FP             +  PF        S+          
Sbjct: 512 RRLGQLIKERYGVDLYVIDGFP------------SSVRPF-YTMPVDPSMPDGP-----T 553

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+   G EI SG  R H  E++ Q  S   + K  V++       +F+ G  PHGG 
Sbjct: 554 RSYDMYLRGEEICSGAQRVHQIELLEQRLSAKKVDKVSVKD----YVDSFRYGAWPHGGF 609

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             G++RI +  LG  ++R+VSLFP        
Sbjct: 610 GLGLERIALFFLGLSDIRQVSLFPRDPKRITP 641


>gi|195123945|ref|XP_002006462.1| GI18555 [Drosophila mojavensis]
 gi|193911530|gb|EDW10397.1| GI18555 [Drosophila mojavensis]
          Length = 533

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 63/278 (22%), Positives = 111/278 (39%), Gaps = 24/278 (8%)

Query: 14  VSDVGS-FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEIAKSVRSE 68
            + VG   V + G VH  R  G   FL +R      Q +            + A ++  E
Sbjct: 83  SAHVGKGLVWVRGRVHTTRAKGKQCFLILRQQSSTVQCILAVGDIISKQMVKFAGNIPKE 142

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE------ 122
            ++ I    ++   +    +     +ELS ++I ++S A+        +   PE      
Sbjct: 143 SIIDIQAKAVAVPTKI--ESCTEQSLELSVEQIFVISQAKAQLPLQIEDASRPENADDAE 200

Query: 123 --------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                     R   R LDLR             +    R  +  + F E  TP + +++ 
Sbjct: 201 GLNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPKIISAAS 260

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EG  +    S     ++ A  Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF
Sbjct: 261 EGGANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEF 318

Query: 235 YQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVS 271
             LD+EM+F     ++L+T+ N    +F+   +  +  
Sbjct: 319 VGLDLEMAFKYHYHEVLHTIGNTFTAIFKGLRDKYSRE 356



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                 + +  YD+   G EI SG  R H  E +++   +
Sbjct: 425 KFPLAIRPFYTMPD--------PNNPMYSNSYDMFMRGEEILSGAQRIHDPEYLIERAKH 476

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI       +      +F+ G PPH G   G++R+VML LG  N+R+ S+FP       
Sbjct: 477 HGIDIT----KIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLT 532

Query: 571 L 571
            
Sbjct: 533 P 533


>gi|317181491|dbj|BAJ59275.1| lysyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 501

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 66/282 (23%), Positives = 119/282 (42%), Gaps = 19/282 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+   
Sbjct: 59  SIVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDE-FKSLKKH--LEVGDIVL--- 112

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            +       TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K+
Sbjct: 113 VKGFPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKD 171

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           + K R+ I++S+R     E F+E  TP++        AR F+      +   Y L  AP+
Sbjct: 172 VFKKRSLIVSSVRKFFETEGFLEVETPMMHPIPGGANARPFITYHNALEIERY-LRIAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++   + +   
Sbjct: 231 LYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLIELSKRLFDY 289

Query: 260 VFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           + +          ++     N    I Y DA+   G    D+
Sbjct: 290 LLKTLNLPSKIIYNDMEVDFNQTSVISYLDALETIGGISKDI 331



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   GMPP  G   GIDR+VMLL GAK++++V LFP  +
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMR 489


>gi|291296503|ref|YP_003507901.1| asparaginyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290471462|gb|ADD28881.1| asparaginyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 441

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 100/262 (38%), Gaps = 14/262 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLCID 74
           G  V + GW+   R  G I FL +RD  G  Q  A         FE A  +  E  L + 
Sbjct: 14  GQEVIIRGWLTGRRSKGKIHFLQLRDGTGFMQATAFKGELPDAEFEEADHLPQESALEVR 73

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           GLV + S          G  ELS + + ++S            +E+       +R L LR
Sbjct: 74  GLVRADSR-------APGGYELSVRGLRVIS--RPSREYPITPKEHGVDFLMDHRHLYLR 124

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
                  +  R  +  ++     A  F+    PILT ++ EG  D      +  G    L
Sbjct: 125 HRRAWAVLRVRDELERAIHDFFHARGFVRLDAPILTPNAVEGTTDLFEVD-LFDGEKAYL 183

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y     A  F + +   P FR E  ++ R   EF+ ++ E++F+  ++ +   E
Sbjct: 184 SQSGQLY-AEAGAMAFGKVYTFGPTFRAERSKTRRHLLEFWMIEPEVAFMTHEENMQLQE 242

Query: 255 NVLRGVFEEFSNGNTVSNNFLR 276
            ++  +         +    L 
Sbjct: 243 ELVVYLVGRVLENRKLELEMLE 264



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 45/153 (29%), Gaps = 17/153 (11%)

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                     + G  +       +  D P +      +K   A   F M     +     
Sbjct: 300 LGLTPLQWGDDFGAPHEAALTAQF--DRPIFV-----EKYPAAIKAFYMQPDPDDPRLVK 352

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +   +            EI  G  R H  E++ Q      +     E  F         G
Sbjct: 353 NADMLAPEGV------GEIIGGSERIHDPELLRQKIREHNLP----EEVFDWYMDLRLFG 402

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             PH G   G++R V  + G +++RE   FP  
Sbjct: 403 TVPHAGFGIGLERTVRWICGIEHIREAIPFPRM 435


>gi|218709797|ref|YP_002417418.1| asparaginyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|218322816|emb|CAV18993.1| Asparaginyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 466

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 100/297 (33%), Gaps = 24/297 (8%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +        V    +    G
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNNLNNYEDEV----LKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPAKGQDFELAATDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++      + F   S P++TAS  EGA +    S ++        
Sbjct: 132 NVIGAVARVRNCLSQAIHRFYHEQGFFWTSAPLITASDAEGAGEMFRVSTLDMENLPRTD 191

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 EGKVDFNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL--RICYDDAIRRYGTDKPDL 293
            E++F + DD+    E++L+ VF            F   RI      R       D 
Sbjct: 252 PEVAFADLDDVAKLAEDMLKYVFAAVLEERRDDLEFFASRIDKQAITRLEQFVDADF 308



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 69/222 (31%), Gaps = 35/222 (15%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y+F  + E         +    + ++ +AI       D D       D ++    +  
Sbjct: 270 LKYVFAAVLE----ERRDDLEFFASRIDKQAITRLEQFVDADFAQVDYTDAIQILLDSG- 324

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM----PQGGMES--- 468
                           F+  W +D      + E ++     +                  
Sbjct: 325 ------------KKFEFDVEWGID-----MSSEHERYLAEEHFKAPVIVKNYPKDIKAFY 367

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           ++ ND     A   D++  G  EI  G  R    +++ +    +GI              
Sbjct: 368 MRLNDDGKTVA-AMDVLAPGIGEIIGGAQREERLDILDERMIAMGIDP----EHMSWYRD 422

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 423 LRKYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|154334456|ref|XP_001563475.1| lysyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134060496|emb|CAM42043.1| putative lysyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 587

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 101/595 (16%), Positives = 185/595 (31%), Gaps = 120/595 (20%)

Query: 3   RYRTHSCGDLGV--SDVGSFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVA----NP 54
           +YR      +    + +   V ++G + + R  G  + F+ I+ D   +  + A      
Sbjct: 93  QYRRKYAPLIAEPGTSLDETVTIAGRIIKKRSSGSKLHFITIQGDMETVQVISAIANYTD 152

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           +S   EI   ++   ++ + G           +   + +  L+A ++ +LS      LP 
Sbjct: 153 ESKFAEIHSKLKRGDIIGVAG---------KPSLSKSNEFSLNAVEVTLLSTCY-HMLPD 202

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                     RF+ R+LDL  +    K  ++R  II  +R      +F+E  TP+L   +
Sbjct: 203 DYFGLSSFEQRFRQRYLDLIVNRDNIKVFIQRANIIKYIRKFFDERDFVEVETPVLNQIA 262

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A    V    +      L  AP+ Y + L+  G DR                     
Sbjct: 263 GGAAARPFVTHHNDLNQTMFLRIAPELYLKELVVGGMDR--------------------- 301

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
                                  +  + ++F N +    +       +A   Y  D  D 
Sbjct: 302 -----------------------VYELGKQFRNESIDLTHNPEFTSCEAYWAY-MDYND- 336

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
                    TE  ++      +  L  +P        ++G        +    + R    
Sbjct: 337 -----WMTATEDLLYG----LAMELHGSPIVRYAPKDSEGKLLPEVTFNFNKPFKRLHII 387

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
           P L            +          +    + +         D        P       
Sbjct: 388 PEL---------EKRLKISFDNVDFESDAGIQFLMDLCKKHKAD-----CPPPYTAPRLL 433

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                 IA+ L      C + C+I D P                        +     ND
Sbjct: 434 DAL---IAEFL---EPECHDPCFICDHP-------------------RVMSPLAKWHRND 468

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
                  +++L  N  E+A+     +   V  + F    ++++  ++       G   A 
Sbjct: 469 PR--LTERFELFVNKKELANAYTELNNPIVQREEFVKQMLNRDKGDDESMKIDEGFIAAL 526

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQ 583
           +  +PP GG   GIDR+VM L    N++EV LFP M     + +   P T+   Q
Sbjct: 527 EHALPPTGGWGLGIDRLVMFLTSQSNIKEVLLFPAMKPEGKNAISYPPGTMLNGQ 581


>gi|215424843|ref|ZP_03422762.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|289748113|ref|ZP_06507491.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis T92]
 gi|289688700|gb|EFD56129.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis T92]
          Length = 439

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 69/355 (19%), Positives = 132/355 (37%), Gaps = 28/355 (7%)

Query: 5   RTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPD 55
           RTH+  ++  +             V ++G V   R  G + F  ++D  G   QV+ + D
Sbjct: 38  RTHTLAEVRAAHPDLPIDTATEDIVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLD 97

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                   + +++  L   G ++      I++    G++ + A    I   A+ L     
Sbjct: 98  KVGQAALDAWKADVDL---GDIVYVHGAVISSR--RGELSVLADCWRI--AAKSLRPLPV 150

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL  R         R  ++ ++R  +    F+E  TP+L   + 
Sbjct: 151 AHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVLQTLAG 210

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F   S       Y L  AP+ + +  +  GFD+ F++   FR+E   S   P E
Sbjct: 211 GAAARPFATHSNALDIDLY-LRIAPELFLKRCIVGGFDKVFELNRVFRNEGADSTHSP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  L+   ++   DD       +++ V +E      +         D ++     +   +
Sbjct: 269 FSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPL------PDGSVYDIDGEWATI 322

Query: 294 R-NPIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           +  P +   +  E    +       I       +  AI    G G+    + + E
Sbjct: 323 QMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGHGKLIEELWE 377


>gi|84393011|ref|ZP_00991778.1| asparaginyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84376365|gb|EAP93246.1| asparaginyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 466

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 101/297 (34%), Gaps = 24/297 (8%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +        V    +    G
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNNLNNYEDEV----LKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPAKGQDFELAATDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++      + F   S P++TAS  EGA +    S ++        
Sbjct: 132 NVIGAVARVRNCLSQAIHRFYHEQGFFWTSAPLITASDAEGAGEMFRVSTLDMENLPRTD 191

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 EGKVDFNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL--RICYDDAIRRYGTDKPDL 293
            E++F + DD+    E++L+ VF            F   RI  +   R       D 
Sbjct: 252 PEVAFADLDDVAKLAEDMLKYVFAAVLEERRDDLEFFASRIDKEAITRLEQFVDADF 308



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 69/222 (31%), Gaps = 35/222 (15%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y+F  + E         +    + ++ EAI       D D       D ++    +  
Sbjct: 270 LKYVFAAVLE----ERRDDLEFFASRIDKEAITRLEQFVDADFAQVDYTDAIQILLDSG- 324

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM----PQGGMES--- 468
                           F+  W +D      + E ++     +                  
Sbjct: 325 ------------KKFEFDVEWGID-----MSSEHERYLAEEHFKAPVIVKNYPKDIKAFY 367

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           ++ ND     A   D++  G  EI  G  R    +++ +    +GI              
Sbjct: 368 MRLNDDGKTVA-AMDVLAPGIGEIIGGAQREERLDILDERMIGMGIDP----EHMSWYRD 422

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 423 LRKYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|1004327|emb|CAA62491.1| asparaginyl-tRNA synthetase [Thermus thermophilus]
          Length = 438

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 59/263 (22%), Positives = 100/263 (38%), Gaps = 14/263 (5%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLC 72
            V   V L GW+++ R  G I FL +RD  G    T V      A F  A  +  E  L 
Sbjct: 11  HVDQEVELRGWLYQRRSKGKIHFLILRDGTGFLQATVVQGEVPEAVFREADHLPQETALR 70

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V              G  EL+ + +++  V+        G +E+       +R L 
Sbjct: 71  VWGRVREDRR-------APGGFELAVRDLQV--VSRPQGEYPIGPKEHGIDFLMDHRHLW 121

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       +  R  +  ++        F+    PILT S+ EG  +      +  G   
Sbjct: 122 LRHRRPFAVMRIRDELERAIHEFFGERGFLRFDAPILTPSAVEGTTELFEVE-LFDGEKA 180

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y     A  F + +   P FR E  ++ R   EF+ ++ E++F+  ++ +  
Sbjct: 181 YLSQSGQLY-AEAGALAFAKVYTFGPTFRAERSKTRRHLLEFWMVEPEVAFMTHEENMAL 239

Query: 253 MENVLRGVFEEFSNGNTVSNNFL 275
            E ++  +        +     L
Sbjct: 240 QEELVSFLVARVLERRSRELEML 262



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 39/115 (33%), Gaps = 10/115 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M     +     +   ++   Y       EI  G  R H  E++ +    
Sbjct: 328 RYPARIKAFYMEPDPEDPELVLNDDLLRPEGY------GEIIGGSQRIHDLELLRRKIQE 381

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G+     E  +       + G  PH G   G++R V  + G  +VRE   FP  
Sbjct: 382 FGLP----EEVYDWYLDLRRFGSVPHSGFGLGLERTVAWICGLAHVREAIPFPRM 432


>gi|332673025|gb|AEE69842.1| lysine--tRNA ligase [Helicobacter pylori 83]
          Length = 501

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 66/282 (23%), Positives = 119/282 (42%), Gaps = 19/282 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+   
Sbjct: 59  SIVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDE-FKSLKKH--LEVGDIVL--- 112

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            +       TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K+
Sbjct: 113 VKGFPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKD 171

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           + K R+ I++S+R     E F+E  TP++        AR F+      +   Y L  AP+
Sbjct: 172 VFKKRSLIVSSVRKFFETEGFLEVETPMMHPIPGGANARPFITYHNALEIERY-LRIAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++   + +   
Sbjct: 231 LYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLIELSKRLFDY 289

Query: 260 VFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           + +          ++     N    I Y DA+   G    D+
Sbjct: 290 LLKTLNLPSKIIYNDMEVDFNQTSVISYLDALETIGGISRDI 331



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   GMPP  G   GIDR+VMLL GAK++++V LFP  +
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMR 489


>gi|195154100|ref|XP_002017960.1| GL17018 [Drosophila persimilis]
 gi|194113756|gb|EDW35799.1| GL17018 [Drosophila persimilis]
          Length = 533

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 66/312 (21%), Positives = 120/312 (38%), Gaps = 29/312 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEIAKSVR 66
           +L        + + G VH  R  G   FL +R      Q +            + A ++ 
Sbjct: 79  ELSSHLEKGLLWVRGRVHTSRSKGKQCFLILRQQSSTVQCILAVGDIISKQMVKFAGNIP 138

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ I    +S   +  +    T  +EL  ++I ++S A+        +   PE    
Sbjct: 139 KESIIDIQAKPVSVPNKIESCTEQT--LELCVEQIFVISQAKAQLPLQIEDASRPENADD 196

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R LDLR             +    R  +  + F E  TP + +++
Sbjct: 197 DGLNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAA 256

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   E
Sbjct: 257 SEGGANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTE 314

Query: 234 FYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           F  LD+EM+F     ++L+T+ N    +F+   +  +          +   ++Y  D   
Sbjct: 315 FVGLDLEMAFKYHYHEVLHTIGNTFTAIFKGLRDNYSRE-------IESVGQQYKVDAFK 367

Query: 293 LRNPIIMHNVTE 304
              P ++   +E
Sbjct: 368 FLEPPLILQFSE 379



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 11/122 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                S  +  YD+   G EI SG  R H  E +++   +
Sbjct: 422 KFPLAIRPFYTMPD--------PSNSTYSNSYDMFMRGEEILSGAQRIHDPEYLIERAKH 473

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHG-GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            GI   ++  +        + G+PP       G++R+VML LG  N+R+ S+FP      
Sbjct: 474 HGIG--LIPPKLRHTSSPSRYGLPPRTPAGGIGMERVVMLYLGLDNIRKTSMFPRDPKRL 531

Query: 570 DL 571
             
Sbjct: 532 TP 533


>gi|21242368|ref|NP_641950.1| asparaginyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|24212402|sp|Q8PM16|SYN_XANAC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|21107804|gb|AAM36486.1| asparaginyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 464

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 119/385 (30%), Gaps = 54/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D       QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +++    +  +        E+ A  ++++   E+        +        +   L  R 
Sbjct: 77  VLVKSQGKGQS-------FEIQASGVDVVGWVEDPLTYPIQPKPMTPEFLREVAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +        R  +  ++        F   STPI+T S  EGA      S ++        
Sbjct: 130 NLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMFRVSTLDMVNLPRDA 189

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q           + +   P FR E+  + R   EF+ ++
Sbjct: 190 SGAVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHLAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNFLRI 277
            E++F +  +     E  L+ +F    +                        ++  F +I
Sbjct: 250 PEIAFADLAEDARLAEQFLKYLFRAVLDERGDDLAFLAERVDKNAIAKLEAFINAPFEQI 309

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA++           P+   +   TEH         ++     P             
Sbjct: 310 DYTDAVKLLQNSGKKFDFPVEWGLDLQTEHERW-----LTEEHIGRPVVVTNYPEHIKAF 364

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 365 YMRLNDDGKTVAAMDVLAPGIGEII 389



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 12/152 (7%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKA 479
           ++  +  +F + +++      E E+ +   H                  ++ ND     A
Sbjct: 317 LLQNSGKKFDFPVEWGLDLQTEHERWLTEEHIGRPVVVTNYPEHIKAFYMRLNDDGKTVA 376

Query: 480 FQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              D++  G  EI  G  R    +V+    +  G+ K      +       + G  PH G
Sbjct: 377 -AMDVLAPGIGEIIGGSQREERLDVLDARMAQFGLDK----EHYSWYRDFRRYGSVPHAG 431

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              G +R+V+ + G  N+R+   +P +    +
Sbjct: 432 FGLGFERLVVYVCGLSNIRDAIPYPRAPGSAE 463


>gi|188526988|ref|YP_001909675.1| lysyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|238691889|sp|B2US13|SYK_HELPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|188143228|gb|ACD47645.1| lysyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|308061473|gb|ADO03361.1| lysyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 501

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 66/282 (23%), Positives = 119/282 (42%), Gaps = 19/282 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+   
Sbjct: 59  SIVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDE-FKSLKKH--LEVGDIVL--- 112

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            +       TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K+
Sbjct: 113 VKGFPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKD 171

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           + K R+ I++S+R     E F+E  TP++        AR F+      +   Y L  AP+
Sbjct: 172 VFKKRSLIVSSVRKFFETEGFLEVETPMMHPIPGGANARPFITYHNALEIERY-LRIAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++   + +   
Sbjct: 231 LYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLIELSKRLFDY 289

Query: 260 VFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           + +          ++     N    I Y DA+   G    D+
Sbjct: 290 LLKTLNLPSKIIYNDMEVDFNQTSVISYLDALETIGGISKDI 331



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   GMPP  G   GIDR+VMLL GAK++++V LFP  +
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMR 489


>gi|21231015|ref|NP_636932.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768980|ref|YP_243742.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|24212400|sp|Q8PAC4|SYN_XANCP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|81305056|sp|Q4UTA1|SYN_XANC8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|21112638|gb|AAM40856.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66574312|gb|AAY49722.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 464

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 118/385 (30%), Gaps = 54/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D       QVVA      F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVATDTLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +++    +  +        E+ A  +EI+   E+        +        +   L  R 
Sbjct: 77  VLVKSQGKGQS-------FEIQASGVEIVGWVEDPLTYPIQPKPMSPEFLREVAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +        R  +  ++        F   STPI+T S  EGA      S ++        
Sbjct: 130 NLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMFRVSSLDMVNLPRTA 189

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q           + +   P FR E+  + R   EF+ ++
Sbjct: 190 QGEVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHLAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNFLRI 277
            E++F +  +     E  L+ +F    +                        ++  F +I
Sbjct: 250 PEIAFADLAEDARLAEQFLKYLFRAVLDERGDDLAFLAERVDKNAISKLEAFINAPFEQI 309

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y +A++           P+   +   TEH         ++     P             
Sbjct: 310 DYTEAVKLLQNSGKKFDFPVEWGLDLQTEHERW-----LTEEHIGRPVVVTNYPEHIKAF 364

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 365 YMRLNDDGKTVAAMDVLAPGIGEII 389



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 12/152 (7%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKA 479
           ++  +  +F + +++      E E+ +   H                  ++ ND     A
Sbjct: 317 LLQNSGKKFDFPVEWGLDLQTEHERWLTEEHIGRPVVVTNYPEHIKAFYMRLNDDGKTVA 376

Query: 480 FQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              D++  G  EI  G  R    +V+    +  G+ K      +       + G  PH G
Sbjct: 377 -AMDVLAPGIGEIIGGSQREERLDVLDARMAQFGLDK----EHYSWYRDFRRYGSVPHAG 431

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              G +R+V+ + G  N+R+   +P +    +
Sbjct: 432 FGLGFERLVVYVCGLSNIRDAIPYPRAPGSAE 463


>gi|298207686|ref|YP_003715865.1| lysyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83850323|gb|EAP88191.1| lysyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 563

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 63/348 (18%), Positives = 125/348 (35%), Gaps = 25/348 (7%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           + G  V ++G + +    G   F  ++D  G  QV  N D  C    K++ +     +  
Sbjct: 44  EDGKKVVIAGRLLQKNIQGKASFGQLQDSAGRIQVYFNRDEICEGEDKTLYNTVFKKLLD 103

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKY 128
           L      E        G+  +  +   ILS +         +++           +R++ 
Sbjct: 104 LGDFIGIEGELFTTQVGEKTVMVKNFSILSKSLRPLPLPKKDKDGNVYDEFNDPELRYRQ 163

Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R++DL  +  + +  VKRT++ N+MR       + E  TPIL        A+ F+     
Sbjct: 164 RYVDLVVNPKVKEVFVKRTKLFNAMRNFFNDAGYFEVETPILQPIPGGAAAKPFISHHNA 223

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ + 
Sbjct: 224 LDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKDY 281

Query: 247 DDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY-GTDKPDLRNP 296
           + ++   EN+L       +                 + R+   D+I+ + G D       
Sbjct: 282 NWMMEFTENLLEHCAVAVNGKTEATFGEHTVNFKAPYARVTMTDSIKHFTGFDIS----G 337

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                + E        V   +       E++    +G      F    
Sbjct: 338 KTEKELYEAAKGMGIDVDETMGKGKLIDEIFGEKCEGNYIQPTFITDY 385



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 47/122 (38%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 373 EGNYIQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSELNDPIDQRERF 432

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  +  ++          RA + GMPP  G+  G+DR++M L   ++++EV  FP 
Sbjct: 433 EAQLKLADRGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLIMFLTNNQSIQEVLFFPQ 492

Query: 565 SQ 566
            +
Sbjct: 493 MK 494


>gi|220931658|ref|YP_002508566.1| asparaginyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992968|gb|ACL69571.1| asparaginyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 463

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 64/349 (18%), Positives = 123/349 (35%), Gaps = 49/349 (14%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V + GWV   R    I FL+I D   +  +             S+ +   + I G + 
Sbjct: 21  KDVIVLGWVRTKRVSKNIAFLEINDGSTLKNLQIVILQPDKFPLDSINTGASVKIKGYLE 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                  +       IE+ A++I ++  A  +  P+  +R   E +R +   L  R +T 
Sbjct: 81  EVKGREQS-------IEMKAEEITLIGEA-PVDYPMQKKRHTFEFLR-EIAHLRPRTNTF 131

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--------- 189
                 R+++  ++        F    +PI+T    EGA +    +  +           
Sbjct: 132 GVVNRFRSKMAYAIHKFFQDRGFHYIHSPIITTGDAEGAGEVFTVTTFDLQNPPLSEGGE 191

Query: 190 -----SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 F+   A      Q +  LMA+     +   P FR E+  + R   EF+ ++ EM
Sbjct: 192 IDFSQDFFGEEAGLTVSGQLEAELMATALGDVYTFGPTFRAENSNTSRHASEFWMIEPEM 251

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RICYD 280
           +F + +++++ +E  ++ +F+   +       F                       I Y 
Sbjct: 252 AFCDLEEMMDIIEEFIKFLFKYALDECPEEMEFFNKWIDKGRIDILKKIIDAEFAHITYT 311

Query: 281 DAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           +AI        D   P+   M   +EH  +   + F K + V    +  
Sbjct: 312 EAIDILEKSGEDFEFPVKWGMDLQSEHERYLTEKHFKKPVMVTDYPKDI 360



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 57/148 (38%), Gaps = 10/148 (6%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES------LKGNDLLSIK 478
            I+  +  +F + + +     +E E+ +   H    +             ++ ND     
Sbjct: 315 DILEKSGEDFEFPVKWGMDLQSEHERYLTEKHFKKPVMVTDYPKDIKAFYMRVNDDDKTV 374

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
                LV    EI  G  R    +V+L+    + ++      ++       + G  PH G
Sbjct: 375 RAVDCLVPQVGEIIGGSQREERYDVLLKRMKELDMNI----EKYQWFLDIRKYGTVPHSG 430

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              G +R++M + G KN+R+V  FP + 
Sbjct: 431 FGLGFERLLMYISGMKNIRDVIPFPRTP 458


>gi|300772950|ref|ZP_07082819.1| lysine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300759121|gb|EFK55948.1| lysine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 572

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 56/334 (16%), Positives = 126/334 (37%), Gaps = 22/334 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F++++D  G  Q     D  C    K++ +     +  +  
Sbjct: 53  KTVSIAGRMMTRRVMGNASFIELQDSTGRIQAYFKRDDICPGEDKTLYNTVFKKLLDIGD 112

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GEREYPESIRFKYRFLD 132
               +       T  I +  ++  +L+ + +    V        +       R++ R++D
Sbjct: 113 IIGIKGYVFTTQTDAICIHVEEFVVLAKSLKPLPVVKSADGKTFDAVTDPEFRYRQRYVD 172

Query: 133 LRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   ++  VK +++  ++R  +  +  +E  TP+L +      AR F+         
Sbjct: 173 LVVNPQVRDTFVKVSKVKTAIRDFLNEQGALEVDTPVLQSIPGGAAARPFITHHNALDIP 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  L+  +++ +   ++
Sbjct: 233 LY-LRIANELYLKRLIVGGFDWVYEFSRNFRNEGMDRTHNP-EFTVLEFYVAYKDYVWMM 290

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
            T E +L  V    +   +V     +I +    +R           I +++  + +   +
Sbjct: 291 ETTEKLLEKVALATNGTTSVQVGENQINFAPPYKR-----------ISIYDSIKEYTGFD 339

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                ++  +    +   IP     G     D +
Sbjct: 340 VSEMDEV-GLREVCKQLHIPTTEAMGKGKLIDEI 372



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +   +    +++L+ NG E+A+     +     L+ F
Sbjct: 378 EGNYIQPTFITDYPKEMSPLTKKHREKAGLVERFELMVNGKEVANAYSELNDPIDQLERF 437

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +     E  ++          R+ + GMPP  GI  GIDR+ ML+    ++++V  FP 
Sbjct: 438 EDQLKLMERGDDEAMFIDYDFVRSLEYGMPPTAGIGIGIDRLAMLMTNQASIQDVLFFPQ 497

Query: 565 SQ 566
            +
Sbjct: 498 MR 499


>gi|240172842|ref|ZP_04751501.1| lysyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 499

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 61/270 (22%), Positives = 114/270 (42%), Gaps = 20/270 (7%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD 55
           RTH+  ++  +             V ++G V   R  G + F  ++D  G   QV+ + D
Sbjct: 36  RTHTLAEVRAAHPDLPVDTTTDDIVGVAGRVVFARNTGKLCFATLQDGDGTRLQVMISFD 95

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +++  L   G ++      I++    G++ + A    +   A+ L     
Sbjct: 96  KVGREALDAWKADVDL---GDIVYVHGTVISSR--RGELSVLADSWRM--AAKSLRPLPV 148

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL      + +  +R  +I ++R  +    F+E  TP+L   + 
Sbjct: 149 AHKEMSEEARVRQRYVDLIVRPQARGVARQRIAVIRAIRNALERRGFVEVETPMLQTLAG 208

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  GFDR F++   FR+E   S   P E
Sbjct: 209 GAAARPFVTHSNALDMDLY-LRIAPELFLKRCIVGGFDRVFELNRVFRNEGADSTHSP-E 266

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++   DD       +++ V +E
Sbjct: 267 FSMLETYQTYGTYDDSAVVTRELIQEVADE 296



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 51/135 (37%), Gaps = 26/135 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ DFP      E   +   H                  ++    ++DL  +G E+A
Sbjct: 380 APTFVKDFPV-----ETTPLTRQHR----------------SIAGVTEKWDLYLHGVELA 418

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G    +   V     ++   +    ++           A + GMPP  G   GIDR++M
Sbjct: 419 TGYSELNDPVVQRDRLADQARAAAAGDDEAMLLDEDFLAALEYGMPPCTGTGMGIDRLLM 478

Query: 549 LLLGAKNVREVSLFP 563
            L G  ++RE  LFP
Sbjct: 479 ALTGL-SIRETVLFP 492


>gi|86146279|ref|ZP_01064604.1| asparaginyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85835990|gb|EAQ54123.1| asparaginyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 466

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 100/297 (33%), Gaps = 24/297 (8%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +        V    +    G
Sbjct: 16  VDSEVTIRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNNLNNYEDEV----LKLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 72  CSVEVTGKIVESPAKGQDFELAATDVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++      + F   S P++TAS  EGA +    S ++        
Sbjct: 132 NVIGAVARVRNCLSQAIHRFYHEQGFFWTSAPLITASDAEGAGEMFRVSTLDMENLPRTD 191

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 EGKVDFNEDFFGKETFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL--RICYDDAIRRYGTDKPDL 293
            E++F + DD+    E++L+ VF            F   RI      R       D 
Sbjct: 252 PEVAFADLDDVAKLAEDMLKYVFAAVLEERRDDLEFFASRIDKQAITRLEQFVDADF 308



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 69/222 (31%), Gaps = 35/222 (15%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y+F  + E         +    + ++ +AI       D D       D ++    +  
Sbjct: 270 LKYVFAAVLE----ERRDDLEFFASRIDKQAITRLEQFVDADFAQVDYTDAIQILLDSG- 324

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM----PQGGMES--- 468
                           F+  W +D      + E ++     +                  
Sbjct: 325 ------------KKFEFDVEWGID-----MSSEHERYLAEEHFKAPVIVKNYPKDIKAFY 367

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           ++ ND     A   D++  G  EI  G  R    +++ +    +GI              
Sbjct: 368 MRLNDDGKTVA-AMDVLAPGIGEIIGGAQREERLDILDERMIAMGIDP----EHMSWYRD 422

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 423 LRKYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|255514166|gb|EET90428.1| asparaginyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 438

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 70/304 (23%), Positives = 122/304 (40%), Gaps = 32/304 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWV 70
              VG  V+L GW++R R  GGI+FL IRD  GI Q  A  DS     ++ A+    E  
Sbjct: 13  PEYVGKKVKLRGWIYRKRTSGGILFLVIRDRTGIVQAAAKKDSIDKRSWDAAEKATIESS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G V             TG  E+S    ++  ++E  P+  +        +    R 
Sbjct: 73  IELSGTVKKDE------RAPTG-FEVSVDSFKLTGLSEPFPITEY----QSTELLLDKRH 121

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR   +   +  R+ I   +R     + F E + P++T+ + E   D        Q +
Sbjct: 122 LWLRSMKMISIMKARSYIFRYLREFHDKKGFYEITPPLITSVAGETGADMFKVDYFGQEA 181

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L ++ Q Y    M    ++ +  AP FR E  R+ +   E++ L+ME +      ++
Sbjct: 182 F--LTESSQPY-AEAMVYALEKVYSFAPSFRAEKSRTTKHLAEYWHLEMEAAHYNLKKLM 238

Query: 251 NTMENVLRGVFEEFSNGNTV---------------SNNFLRICYDDAIRRYGTDKPDLRN 295
           +  E ++  V ++ ++ N                    F R+ Y+ AI         L+ 
Sbjct: 239 DFEERMVGSVAQKLADKNQDILAQLGVDPALLKKIKPPFKRLTYEQAIDLLNQKGKSLKW 298

Query: 296 PIIM 299
              +
Sbjct: 299 GDDL 302



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 52/333 (15%), Positives = 88/333 (26%), Gaps = 36/333 (10%)

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I+     + R + E           F  I         G    D+               
Sbjct: 132 IMKARSYIFRYLRE-----FHDKKGFYEITPPLITSVAGETGADMFKVDYFGQEAFLTES 186

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGN 368
           S+    + + ++   Y     P+     +R        W         A+   +      
Sbjct: 187 SQPYAEAMVYALEKVYSFA--PSFRAEKSRTTKHLAEYWHLEMEA---AHYNLKKLMDFE 241

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------RNHIAQ 422
              +G VA+ L   N + I  +L +                   A D             
Sbjct: 242 ERMVGSVAQKLADKN-QDILAQLGVDPALLKKIKPPFKRLTYEQAIDLLNQKGKSLKWGD 300

Query: 423 ELGIINCNCFEFCWIMDFPFYE--WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           +LG+            D P +   W +E K      NP              D  +  + 
Sbjct: 301 DLGVEEEKLLTEE--EDKPVFVMYWPKELKPFYSPINP-------------KDPRTTLSV 345

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN--RFGGLYRAFQCGMPPHGG 538
                    EI     R    + ++  F  V  +K V  N   +       + G  PH G
Sbjct: 346 DLQAPHGHGEIIGASERVWKYDELMDRFHEVEAAKGVKFNIKNYEWYIDLRRYGSVPHAG 405

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
              G +R++  LL   ++R+   FP   N    
Sbjct: 406 FGLGTERLIKWLLNLDHIRDAIPFPRMVNRIAP 438


>gi|332519717|ref|ZP_08396181.1| lysyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332044276|gb|EGI80470.1| lysyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 544

 Score =  174 bits (441), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 105/260 (40%), Gaps = 15/260 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS--EWVLCIDG 75
           G+ V ++G +   R  G   F +++D  G  QV  N D  C    KS  +     L   G
Sbjct: 27  GTQVVIAGRLMSRRIQGNASFAELQDSEGRIQVYFNRDEICAGDDKSKYNNVYKKLLDIG 86

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKY 128
             +    E     +  G+  +  +   +LS A +       + +           +R++ 
Sbjct: 87  DFIGIEGELFTTKV--GEKTVLVKDFTLLSKALKPLPLPKVDADGNQHDAFVDPEMRYRQ 144

Query: 129 RFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R+ DL  +   K   VKRT++ N+MR       + E  TPIL        AR F+     
Sbjct: 145 RYADLAVNPHVKEVFVKRTKLFNAMRSFFNDAGYFEVETPILQPIPGGAAARPFITHHNS 204

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +++ + 
Sbjct: 205 LDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVAYKDY 262

Query: 247 DDILNTMENVLRGVFEEFSN 266
           + +++  E +L       + 
Sbjct: 263 NWMMDFCEKLLEHCAIAVNG 282



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 60/167 (35%), Gaps = 14/167 (8%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 354 EGNYIQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSELNDPIDQRERF 413

Query: 509 SNVGISKEVVENRF-----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +     +  ++           RA + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 414 EHQLKLAQKGDDEATEFIDHDFLRALEYGMPPTSGMGIGMDRLIMFLTNNQSIQEVLFFP 473

Query: 564 MSQ--NFCDLLMGSPSTV-------SVEQLRELGLRIVENPKKILKI 601
             +       +     TV       +   L EL  +   + KK  K 
Sbjct: 474 QMRPEKKAIPMSEEEKTVFEILKKNTPIDLNELKSQSGLSNKKWDKT 520


>gi|315187301|gb|EFU21057.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 424

 Score =  174 bits (441), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 69/255 (27%), Positives = 115/255 (45%), Gaps = 19/255 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            S  G  V + GWVHR+R  GGI F+ +RD  G  Q+V        E +  +  E V+ +
Sbjct: 9   ASHTGKDVVVKGWVHRIRELGGISFIILRDRSGEVQLVL-------EGSADLTLESVISV 61

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEE--LPLPVFGEREYPESIRFKYRFL 131
            G V +            G  E+   +IE+L+ AE            +        +R L
Sbjct: 62  KGRVEANEK-------APGGAEIHVGEIEVLARAEPDLPIPINQDPSQLSLDALLDHRML 114

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR   +      +  ++      + ++ F E  T  L A+  EG       +  ++  +
Sbjct: 115 SLRIPKIRTIFTLQAGLVQYFADYLRSQGFSEIKTSKLIATGTEGGTGLFEVNYFDRKVY 174

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DIL 250
            A  Q+PQ YKQ ++ASG +R F+I   +R E   + R   E+  LD+EM+F+E + D++
Sbjct: 175 LA--QSPQFYKQAMVASGMERVFEIGMAYRAEKHDTPRHLNEYVSLDVEMAFIETEHDLM 232

Query: 251 NTMENVLRGVFEEFS 265
           +  E +L  +FE+  
Sbjct: 233 DLEEGILAYMFEKVK 247



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 8/129 (6%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ-YDLVCNGFEIASGGIRNHMSE 502
           EW  E+  I+     F                   + + +DL+  G EI +GG R H   
Sbjct: 303 EWAHEKAGIEAV---FVYGFPRRARPFYTYPEGRSSTRSFDLLFRGLEITTGGRRIHEYS 359

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           ++ +     G++    E   GG    F+ G PPHGG A G++R+   +LG +NVRE SLF
Sbjct: 360 MLKETLPLFGLT----EEGLGGYVEIFKYGCPPHGGFAIGLERLTQKILGLQNVREASLF 415

Query: 563 PMSQNFCDL 571
           P  +     
Sbjct: 416 PRDRRRVSP 424


>gi|195485180|ref|XP_002090983.1| Aats-asp [Drosophila yakuba]
 gi|194177084|gb|EDW90695.1| Aats-asp [Drosophila yakuba]
          Length = 531

 Score =  174 bits (441), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 64/275 (23%), Positives = 113/275 (41%), Gaps = 24/275 (8%)

Query: 17  VGS-FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SACFEIAKSVRSEWVL 71
           VG   V + G VH  R  G   FL +R      Q +   +        + A ++  E ++
Sbjct: 84  VGKGLVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVNDFISKQMVKFAGNIPKESII 143

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--------- 122
            I    ++ S++    +     +ELS ++I ++S A+        +   PE         
Sbjct: 144 DIQAKPVAVSSKI--ESCTEQSLELSVEQIFVISQAKAQLPLQIEDASRPENADDAEGLN 201

Query: 123 -----SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                  R   R LDLR             +    R  +  + F E  TP + +++ EG 
Sbjct: 202 IRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAASEGG 261

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +    S     ++ A  Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF  L
Sbjct: 262 ANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGL 319

Query: 238 DMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVS 271
           D+EM+F     ++L+T+ N    +F+   +  +  
Sbjct: 320 DLEMAFKYHYHEVLHTIGNTFTAIFKGLRDKYSKE 354



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                 + +  YD+   G EI SG  R H  E +++   +
Sbjct: 423 KFPLAIRPFYTMPD--------PNNPVYSNSYDMFMRGEEILSGAQRIHDPEYLIERAKH 474

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI      ++      +F+ G PPH G   G++R+VML LG  N+R+ S+FP       
Sbjct: 475 HGIDT----SKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLT 530

Query: 571 L 571
            
Sbjct: 531 P 531


>gi|213401987|ref|XP_002171766.1| cytoplasmic lysine-tRNA ligase Krs1 [Schizosaccharomyces japonicus
           yFS275]
 gi|211999813|gb|EEB05473.1| cytoplasmic lysine-tRNA ligase Krs1 [Schizosaccharomyces japonicus
           yFS275]
          Length = 590

 Score =  174 bits (441), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 104/256 (40%), Gaps = 4/256 (1%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
            V ++G VH +R  G  + F +I       QV+     A      +            ++
Sbjct: 124 KVSVAGRVHALRTAGAKLRFYEIHSEGKKLQVMCQAQDAETVDFAAQHEHIRRGDIIGII 183

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDT 137
                +       G++ + A++  +LS    + LP          IR + R+LDL   ++
Sbjct: 184 GYPGRSNPKGRADGELSVFARQCVLLSPCLRM-LPKEHYGLKDLEIRHRQRYLDLIMNNS 242

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                V R+RII  +R  +   NFIE  TP++   +        V    +      +  A
Sbjct: 243 TRDRFVARSRIIQYLRNFLDKRNFIEVETPMMNMIAGGATAKPFVTHHNDLDMDLYMRVA 302

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y ++L+  G DR ++I   FR+E       P EF   +   ++ +  D+++  E ++
Sbjct: 303 PELYLKMLVVGGLDRVYEIGRQFRNEGADLTHNP-EFTSCEFYQAYADYYDLMDMTEELV 361

Query: 258 RGVFEEFSNGNTVSNN 273
             + +E + G  +  +
Sbjct: 362 SSMVKELTGGYVLPYH 377



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 4/95 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++      E+ +     +        F      K+  ++           A + 
Sbjct: 483 PGLCERFEAFVATKELCNAYTELNDIFDQRARFEEQARQKDQGDDEAQLIDENFCTALEY 542

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP GG   GIDR+VM L  +  +REV LFP  +
Sbjct: 543 GLPPTGGWGIGIDRLVMFLTDSNTIREVLLFPHMK 577


>gi|195382876|ref|XP_002050154.1| GJ20350 [Drosophila virilis]
 gi|194144951|gb|EDW61347.1| GJ20350 [Drosophila virilis]
          Length = 537

 Score =  174 bits (441), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 65/278 (23%), Positives = 110/278 (39%), Gaps = 24/278 (8%)

Query: 14  VSDVGS-FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEIAKSVRSE 68
            S VG   V + G VH  R  G   FL +R      Q +            + A ++  E
Sbjct: 87  SSHVGKGLVWVRGRVHTSRSKGKQCFLILRQQSSTVQCILAVGDIISKQMVKFAGNIPKE 146

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE------ 122
            ++ I    +S    T   +     +EL  ++I ++S A+        +   PE      
Sbjct: 147 SIIDIQAKPVSVP--TRIESCTEQLLELCVEQIFVISQAKAQLPLQIEDASRPENADEAD 204

Query: 123 --------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                     R   R LDLR             +    R  +  + F E  TP + +++ 
Sbjct: 205 GLNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPKIISAAS 264

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EG  +    S     ++ A  Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF
Sbjct: 265 EGGANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEF 322

Query: 235 YQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVS 271
             LD+EM+F     ++L+T+ N    +F+   +  +  
Sbjct: 323 VGLDLEMAFKYHYHEVLHTIGNTFTAIFKGLRDKYSRE 360



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   +  PF                 I +  YD+   G EI SG  R H  E +++   +
Sbjct: 429 KFPLSIRPFYTMPD--------PNNPIYSNSYDMFMRGEEILSGAQRIHDPEYLIERAKH 480

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI       +      +F+ G PPH G   G++R+VML LG  N+R+ S+FP       
Sbjct: 481 HGIDTT----KIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLT 536

Query: 571 L 571
            
Sbjct: 537 P 537


>gi|325922531|ref|ZP_08184292.1| asparaginyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325546996|gb|EGD18089.1| asparaginyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 464

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 119/385 (30%), Gaps = 54/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D       QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEVKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +++    +  +        E+ A  +EI+   E+        +        +   L  R 
Sbjct: 77  VLVKSQGKGQS-------FEIQASGVEIVGWVEDPLTYPIQPKPMSPEFLREVAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           +        R  +  ++        F   STPI+T S  EGA      S ++        
Sbjct: 130 NLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIVTTSDAEGAGQMFRVSTLDMANLPRNE 189

Query: 190 --------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q           + +   P FR E+  + R   EF+ ++
Sbjct: 190 KGEVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHLAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNFLRI 277
            E++F +  +     E  L+ +F    +                        ++  F +I
Sbjct: 250 PEIAFADLAEDARLAEQFLKYLFRAVLDERGDDLAFLAERVEKNAISKLEAFINAPFEQI 309

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y +A++           P+   +   TEH         ++     P             
Sbjct: 310 DYTEAVKLLQNSGKKFDFPVEWGLDLQTEHERW-----LTEEHIGRPVVVTNYPEHIKAF 364

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 365 YMRLNDDGKTVAAMDVLAPGIGEII 389



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 12/152 (7%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKA 479
           ++  +  +F + +++      E E+ +   H                  ++ ND     A
Sbjct: 317 LLQNSGKKFDFPVEWGLDLQTEHERWLTEEHIGRPVVVTNYPEHIKAFYMRLNDDGKTVA 376

Query: 480 FQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              D++  G  EI  G  R    +V+    +  G+ K      +       + G  PH G
Sbjct: 377 -AMDVLAPGIGEIIGGSQREERLDVLDARMAQFGLDK----EHYSWYRDFRRYGSVPHAG 431

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              G +R+V+ + G  N+R+   +P +    +
Sbjct: 432 FGLGFERLVVYVCGLSNIRDAIPYPRAPGSAE 463


>gi|254520508|ref|ZP_05132564.1| asparaginyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226914257|gb|EEH99458.1| asparaginyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 464

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 118/351 (33%), Gaps = 51/351 (14%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             +++SGW+  +R      F+++ D       QVV +     F+    +     + + G 
Sbjct: 20  EEIKISGWIRTLRASNAFGFIEVNDGTFFKNVQVVFDNKLDNFKDVSKLPISSSITVIGT 79

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +++               E+ A++I I  ++ +   P+  +R   E +R     L  R +
Sbjct: 80  LVATPE-------AKQPFEIQAKEIVIEGLS-QSDYPLQKKRHTFEYLR-TIAHLRPRSN 130

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--------- 187
                   R+    ++        F+   TP++T S  EGA +    + ++         
Sbjct: 131 AFSAVFRVRSVAAYAIHKFFQERGFVYTHTPLITGSDCEGAGEMFRVTTLDLHNVPKTEE 190

Query: 188 -----QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                +  F+          Q      A  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 191 GAIDFKQDFFGKESNLTVSGQLNAECYALAFRNVYTFGPTFRAENSNTARHAAEFWMIEP 250

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RIC 278
           E++F +  D +   E++L+ V E           F                      ++ 
Sbjct: 251 EIAFADLQDDMELAEDMLKYVLEYVLAECPEEMAFFNQFVDKGILDRLNHVMTSDFGKVT 310

Query: 279 YDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           Y +A+            P+   +   TEH  +     F K + V    +  
Sbjct: 311 YTEAVEILKKADKKFEYPVEWGIDLQTEHERYLTEEHFKKPVFVTDYPKDI 361



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 58/150 (38%), Gaps = 26/150 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P        K I      F M          +D  ++ A  
Sbjct: 339 HERYLTEEHFKKPVFVTDYP--------KDIKA----FYMR-------LNDDGKTVAAT- 378

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  E+  G  R    +++ +  + +G++    E  +       + G   H G  
Sbjct: 379 -DLLVPGIGELIGGSQREERIDILTKRMAELGLN----EEDYWWYLELRKYGETKHAGFG 433

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R++M + G  N+R+V  FP +    D
Sbjct: 434 LGFERLIMYITGMSNIRDVIPFPRTTGQSD 463


>gi|213964227|ref|ZP_03392460.1| asparaginyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213953117|gb|EEB64466.1| asparaginyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 476

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 109/276 (39%), Gaps = 30/276 (10%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             + L GWV   R +    F+ + D   I   QVV + ++   +I K + +   + + G 
Sbjct: 16  EEITLKGWVRTFRSNR---FIALNDGSTIDNLQVVVDFENTNPDILKRITTGAAIEVKGK 72

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++    +  +       +EL A ++ IL  +     P+  ++   E +R +   L +R +
Sbjct: 73  LVESQGKGQS-------VELQATEVVILGDSNPEEYPIQPKKHSLEFLR-ENAHLRVRSN 124

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--------- 187
           T    +  R+ +  ++        F   +TPI+T S  EGA +    + ++         
Sbjct: 125 TFSAVMRVRSTLAFAIHKYFQDNGFFYVNTPIITGSDAEGAGEMFRVTTLDAKNPPLTEN 184

Query: 188 -----QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                +  F+          Q +    A    + +   P FR E+  + R   EF+ ++ 
Sbjct: 185 GEVDYKKDFFGRETNLTVSGQLEGETFAMALGKIYTFGPTFRAENSNTSRHLAEFWMIEP 244

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           EM+F +  D ++  E+ ++ V +           FL
Sbjct: 245 EMAFYDLIDNMDLAEDFIKYVLKYTLEVRRDDLEFL 280



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 14/121 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M          +D  +++A   D++  G  EI  G  R    +V+ Q  +
Sbjct: 368 DYPANIKAFYMR-------LNDDGKTVRAM--DILFPGIGEIVGGSQREERYDVLKQKIA 418

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           ++ + ++ +           + G   H G   G +R+V+   G  N+R+V  +P +    
Sbjct: 419 DLNMDEQTLW----WYLDLRKFGTAVHSGFGLGFERLVLFATGMTNIRDVIPYPRTPQSA 474

Query: 570 D 570
           +
Sbjct: 475 E 475


>gi|126327787|ref|XP_001377539.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 479

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 18/257 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V++ GWV  VR    ++FL I D   +  +    D +    +  +     + I G++
Sbjct: 43  GENVKVQGWVRSVRSQKEVLFLHINDGSSLEHLQIVADPSLG--SCDLTFGSSVEIQGIL 100

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    +  N        EL A KIE++   +    P+  +  +P     +Y  L  R + 
Sbjct: 101 VKSPYKKQNT-------ELKADKIEVIGRCDPQTFPIKYKERFPLEYIRQYPHLRCRTNA 153

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-----GSFY 192
           L   +  R+   +++     A  +I   TP++T++  EGA +       ++      +F+
Sbjct: 154 LGSILRVRSEATDAIHSFFKANGYIHIHTPVITSNDCEGAGELFQVEPSSKVKETGKNFF 213

Query: 193 ---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
              A      Q    +M+  F + F   P FR E+ +S R   EFY ++ EMSFVE   D
Sbjct: 214 DVPAFLTVSAQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEMSFVESLQD 273

Query: 249 ILNTMENVLRGVFEEFS 265
           ++  ME + +   E   
Sbjct: 274 LMQIMETLFKTTTETVL 290



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 49/132 (37%), Gaps = 18/132 (13%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIR 497
           D P +  N       F   PF M     E           A   DL+  G  E+  G +R
Sbjct: 363 DIPVFVIN-----YPFDLKPFYMRDNEDE------PQHTVA-AVDLLVPGVGELFGGSLR 410

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                ++ Q    +G+      + +       Q G  PHGG   G +R +  +LG  N++
Sbjct: 411 EERFHLLQQRLERLGLM-----DTYQWYLDLRQFGSVPHGGFGMGFERYLQCILGVDNIK 465

Query: 558 EVSLFPMSQNFC 569
           +V  FP   + C
Sbjct: 466 DVIPFPRFPHSC 477


>gi|254552712|ref|ZP_05143159.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
          Length = 462

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 69/355 (19%), Positives = 132/355 (37%), Gaps = 28/355 (7%)

Query: 5   RTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPD 55
           RTH+  ++  +             V ++G V   R  G + F  ++D  G   QV+ + D
Sbjct: 38  RTHTLAEVRAAHPDLPIDTATEDIVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLD 97

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                   + +++  L   G ++      I++    G++ + A    I   A+ L     
Sbjct: 98  KVGQAALDAWKADVDL---GDIVYVHGAVISSR--RGELSVLADCWRI--AAKSLRPLPV 150

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL  R         R  ++ ++R  +    F+E  TP+L   + 
Sbjct: 151 AHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVLQTLAG 210

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F   S       Y L  AP+ + +  +  GFD+ F++   FR+E   S   P E
Sbjct: 211 GAAARPFATHSNALDIDLY-LRIAPELFLKRCIVGGFDKVFELNRVFRNEGADSTHSP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  L+   ++   DD       +++ V +E      +         D ++     +   +
Sbjct: 269 FSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPL------PDGSVYDIDGEWATI 322

Query: 294 R-NPIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           +  P +   +  E    +       I       +  AI    G G+    + + E
Sbjct: 323 QMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGHGKLIEELWE 377


>gi|145591555|ref|YP_001153557.1| asparaginyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145283323|gb|ABP50905.1| asparaginyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 431

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 74/398 (18%), Positives = 137/398 (34%), Gaps = 46/398 (11%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V L GWVHR R     IF+ +RD  G+ Q+V   D   F+  + +  E  L + G ++ 
Sbjct: 20  KVTLRGWVHRKRVLKEKIFILLRDSTGVIQLVLPRDK--FKDLEDLNLESALVVTGALVK 77

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                       G +E+    ++ +   E  P+                R L +R   + 
Sbjct: 78  EPR-------APGGVEMHVASVDWVYRGEPYPI-NEDAVVADSEYLLDVRHLWIRSRKMQ 129

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             +  R  +  ++        F E   P+   ++ EG          ++  +  L Q+ Q
Sbjct: 130 AVLKIRHTVFGAIHEYFRKNGFYEVHPPMFITAAVEGGATLFKVQYFDKIVY--LTQSSQ 187

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G ++ + IAP FR E  R+ R   EF+  +ME+++   +D +   E V+  
Sbjct: 188 FYLEALI-YGLEKVYTIAPSFRAEPSRTRRHLTEFWHAEMEIAWAGMEDAVLVGEGVISH 246

Query: 260 VFEEFSNGNTVS---------------NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           V E+  +                      F R+ YD+A+        ++     +    E
Sbjct: 247 VVEKVLDERQEELRLLGRRIEPLEKAKPPFYRVSYDEAVDILQKKGFEIGWGDDIGADEE 306

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLD 364
             +  +F         +    ++  P K          R         +P +   F  L 
Sbjct: 307 RALSQDF---------DKPIVLYGFPEKVKAFYHRNNPR---------RPEVTLSFDVLL 348

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
             G    +G   +            R  +   D  ++I
Sbjct: 349 PEGYGEVIGGGERIYQAEELIEKIKRFGLNPQDYWWYI 386



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 6/104 (5%)

Query: 470 KGNDLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           + N         +D++      E+  GG R + +E +++     G++ +           
Sbjct: 332 RNNPRRPEVTLSFDVLLPEGYGEVIGGGERIYQAEELIEKIKRFGLNPQDYW----WYID 387

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             + G  PH G   G+DR+ M ++GA ++R+V  FP        
Sbjct: 388 LRRYGSVPHSGFGLGVDRLTMWIVGADHIRDVVPFPRDVRRTAP 431


>gi|48478484|ref|YP_024190.1| asparaginyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|48431132|gb|AAT43997.1| asparaginyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 427

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 60/258 (23%), Positives = 107/258 (41%), Gaps = 15/258 (5%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAKSVRSEWV 70
           L    +G  V + GWV+R+R  G I F+ IRD   I Q VA+      +    S+  E  
Sbjct: 8   LNDDFIGKTVTIHGWVYRIRSSGRITFIIIRDSTDIVQCVASSSLGERYNDISSLTIESS 67

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G V            +TG  E+     +I    E  P+     ++  +      R 
Sbjct: 68  LEVTGQVSKDE------RAVTG-YEIKISDFKIYQRNEFFPIT----KDKSDEFLLDNRH 116

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R+ +  +         + +   P++ +++ EG          +   
Sbjct: 117 LWLRSREFTSILKIRSTVFKAFADFFYNNGYYQVQGPMMVSTATEGGATLFKLKFFDDDV 176

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y + ++ S  ++ F IAP FR E  R+ R   E++  + E +++  DD++
Sbjct: 177 Y--LTQSSQFYLETMIFS-LEKVFTIAPSFRAEKSRTRRHLSEYWHAEGEAAWLHNDDMM 233

Query: 251 NTMENVLRGVFEEFSNGN 268
           N  E ++  +  E  N N
Sbjct: 234 NVEEKMIEYIVSEVLNKN 251



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 56/159 (35%), Gaps = 27/159 (16%)

Query: 418 NHIAQELGIINC-----NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                +LG         +  +  ++ ++P     EE K   F H P          +  +
Sbjct: 291 LKYGDDLGADEEYNIMIHYEKPLFVTNYP-----EELK--TFYHLP---DPENPGEILCH 340

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           DLL+ + +         EI  GG R    + +L+     G+     E  +       + G
Sbjct: 341 DLLAPEGY--------GEIIGGGERIWRLDELLERMKKAGLP----EEDYYWYIDLRRYG 388

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             PH G   G+DR+V  +    N+R+   +P +      
Sbjct: 389 SVPHSGFGLGLDRLVNWICNLNNIRDAIPYPRTVRRIKP 427


>gi|153835339|ref|ZP_01988006.1| asparaginyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148868153|gb|EDL67310.1| asparaginyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 472

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 64/384 (16%), Positives = 121/384 (31%), Gaps = 48/384 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +   E +    G
Sbjct: 22  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNN----LNNYDDEVLKLTTG 77

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 78  CSVEVTGKIVESPAKGQDFELAATNVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 137

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++  +     
Sbjct: 138 NVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTE 197

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +    Y +                    A    + +   P FR E+  + R   EF+ ++
Sbjct: 198 EGKVDYNEDFFGKETFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 257

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            E++F + +DI    E++L+ VF+           F                      ++
Sbjct: 258 PEVAFADLNDIAKLSEDMLKYVFKAALEECRDDLEFFAQRIDKEAITRLEKFVSSDFAQV 317

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y DAI+       +   P+         + SE   F           V   P       
Sbjct: 318 DYTDAIQILLDSGREFEFPVEWG----IDMSSEHERFLAEEHFKAPVIVKNYPKDIKAFY 373

Query: 338 RAFCDR-MNEWARSQGQPGLAYIF 360
               D      A     PG+  I 
Sbjct: 374 MRLNDDGKTVAAMDVLAPGIGEII 397



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 6/99 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +++ +    +GI                +
Sbjct: 377 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDILDERMREIGIDP----EHMNWYRDLRR 431

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 432 YGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 470


>gi|225870243|ref|YP_002746190.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225699647|emb|CAW93326.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 448

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 60/308 (19%), Positives = 111/308 (36%), Gaps = 24/308 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
              VG  V +  WV      G I FL +RD       V   P+          +A F+  
Sbjct: 12  KDHVGQEVTVGAWVANKSGKGKIAFLQLRDGSAFFQAVAFKPNLIQAFGEEAGAAKFDTI 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + +  E  + + G+V   +             EL    +E++  +++ P+     +E+  
Sbjct: 72  RHLSQETSVLVKGIVKEDARSKF-------GYELDITDLEVIGDSKDYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                +R L LR       +  R  II +         FI+  +PIL+ ++ E   +   
Sbjct: 122 DFLMDHRHLWLRSRRQAAIMQIRNAIIYASYEFFDQNGFIKFDSPILSGNAAENTTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  +F  L Q+ Q Y +  M     R F   P FR E  ++ R   EF+ +D E  
Sbjct: 182 TDYFGNPAF--LSQSGQLYLEAGM-MALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYP 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++ L+  E  ++ + +   +    +   L    +   R        +     +  +
Sbjct: 239 FLSHEESLDLQEAYVKAMIQGVLDRAPQALELLERDTELLKRYIAEPFKRVSYDDAISLL 298

Query: 303 TEHFVHSE 310
            EH    +
Sbjct: 299 QEHSTDDD 306



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVIN-----YPASFKAFYMKPVPGNEERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + +L      G++       +       + G  PH G   G++R+V  
Sbjct: 371 EIIGGSVREDNYDKLLAKIKAEGLNP----EDYDFYLDLRKYGSVPHAGFGLGLERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRLKP 448


>gi|89097184|ref|ZP_01170074.1| asparaginyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89088007|gb|EAR67118.1| asparaginyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 463

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 120/356 (33%), Gaps = 51/356 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIAKSVRSEWVL 71
            + +   VR++GWV   R      FL++ D   +  V      +   F+          +
Sbjct: 14  EAHLNEKVRITGWVRTSRDSKTFGFLEVNDGTFLKNVQVVYGDELPNFKDITKAAISSTV 73

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I+G ++           +    E+ A++I I   +         ++++          L
Sbjct: 74  SIEGSIVLTPD-------MKQPFEMKAEQITIEGKSNSDYPLQ--KKKHSFEYLRTIAHL 124

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +T       R+    ++      + FI   TP++T S  EGA +    + ++    
Sbjct: 125 RPRTNTYSAVFRIRSLASYAIHNFFQEKGFIYAQTPVITGSDTEGAGEMFRVTTMDMNNV 184

Query: 190 ------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q      A  F + +   P FR E+  + R   EF
Sbjct: 185 PKTDEGDVDFSKDFFNGEANLTVSGQLSAEAFALAFQKVYTFGPTFRAENSNTTRHAAEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ E++F E  DIL+  E +++ V +   N       F                    
Sbjct: 245 WMVEPEVAFAELPDILDLAEAMIKHVIQYVLNEAPEEITFFNSFIDKTLIERLNTALNTD 304

Query: 276 --RICYDDAIRRYGTDKPDLRN-PIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVW 327
             R+ Y DAI +           P    ++ TEH  +    ++ + + V    +  
Sbjct: 305 YARVTYTDAIEQLKESGEKFEYQPEWGADLQTEHERYLSEVIYKRPVFVTDYPKDI 360



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 64/199 (32%), Gaps = 34/199 (17%)

Query: 378 HLNIVNTEAIRVRLD-MQDGDSCFFIAGDPLKFCSFAA---------DARNHIAQELGII 427
             N    + +  RL+   + D       D ++    +           A      E  + 
Sbjct: 284 FFNSFIDKTLIERLNTALNTDYARVTYTDAIEQLKESGEKFEYQPEWGADLQTEHERYLS 343

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                   ++ D+P        K I      F M        + ND     A    LV  
Sbjct: 344 EVIYKRPVFVTDYP--------KDIKA----FYM--------RANDDGKTVAAADLLVPE 383

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             E+  G  R    E++ +  + +G+  +             + G   H G   G +R++
Sbjct: 384 IGELIGGSQREEREELLKERITEMGMDLKDYW----WYLELRKYGETKHSGYGIGFERLI 439

Query: 548 MLLLGAKNVREVSLFPMSQ 566
           M L G KN+R+V  FP + 
Sbjct: 440 MYLTGMKNIRDVIPFPRTP 458


>gi|320583691|gb|EFW97904.1| Cytosolic asparaginyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 549

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 67/321 (20%), Positives = 118/321 (36%), Gaps = 29/321 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
             +   V++ GW+HR+R   G+ F+ +RD  G  Q V + D A      S+  E  L I 
Sbjct: 121 KHIEERVKVQGWIHRLRLQKGLAFIVLRDGTGYVQCVLSGDLANAYQTLSLTIESTLSIY 180

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YPESIRFKYRFLD 132
           G +              G +EL+    E++ +A         + +     SI    R L 
Sbjct: 181 GTIRKLPEG----KSAPGGVELAVDYYEVVGLAPSGKESFTNKIQEGTDPSILMDQRHLT 236

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +TL   +  R  ++ ++R   I E+  E + P +  +  EG           + +F 
Sbjct: 237 LRGETLSAVMKVRAALLAAIRRVYIEESVTEVTPPCMVQTQVEGGSTLFKMDYYGEEAF- 295

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  +       + I   FR E   + R   E+  ++ E++FV  DD+L+ 
Sbjct: 296 -LTQSSQLYLETCLP-ALGDVYCIQESFRAEKSHTRRHLSEYTHIEAELAFVTFDDLLSH 353

Query: 253 MENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRY------GTDKPD 292
           +E V+    +                         F R+ Y +A+           D   
Sbjct: 354 IERVITKTVQYVLEDPTAGPLVKQLNPGFVAPQLPFKRMQYIEALDWLNENGIPNEDGEK 413

Query: 293 LRNPIIMHNVTEHFVHSEFRV 313
            +    +    E  +     V
Sbjct: 414 FKFGDDIAEAAERKMTDTIGV 434



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+    EI  G +R   ++ +L+ F   GI  +     +         G  PHGG   G 
Sbjct: 466 LMPTVGEITGGSMRIEDTQELLEGFKREGIDAKS----YYWFVDQRIYGTCPHGGYGLGT 521

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +RI+  L     VR+ SL+P     C  
Sbjct: 522 ERILAWLCNRFTVRDCSLYPRFTGRCKP 549


>gi|328955978|ref|YP_004373311.1| lysyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456302|gb|AEB07496.1| lysyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 508

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 56/266 (21%), Positives = 112/266 (42%), Gaps = 25/266 (9%)

Query: 7   HSCGDLGVSDV----GS----FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           H   +L ++      G      V ++G V   R  G I F+ +RD  G  Q+    +   
Sbjct: 51  HHVAELELAYASLADGESTTDIVSVAGRVMAKRGQGKIAFIVVRDPTGEIQLFCRINDMR 110

Query: 59  FE---IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
            E   + + +    ++ + G V+             GQ+ ++   + +L+ +   PLP  
Sbjct: 111 DEDWALVRDLDLGDIVNVSGCVVRTRR---------GQLSIAPTSVALLAKSVR-PLPEK 160

Query: 116 GEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                 +  R++ R++DL  +  +     KR+RI+++ R  M A+ + E  TPIL     
Sbjct: 161 FHGLSDKETRYRQRYVDLIMNDEVRSTFEKRSRILSAFRRHMDADGYFEVETPILQNIQG 220

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              A+ F+          Y L  A + + + L+  GF+R ++I   FR+E       P E
Sbjct: 221 GATAKPFITHHNALNQENY-LRIATELHLKRLLVGGFERVYEIGRIFRNEGMDQTHNP-E 278

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRG 259
           F  ++   ++ + + +    + V++ 
Sbjct: 279 FTTMEAYRAYSDLEGMKALAQGVIKA 304



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 76/197 (38%), Gaps = 27/197 (13%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P+A+ ++      + +   +++  +     G  ++    A      +  E+G       +
Sbjct: 332 PMAEIVSEALGSPVSLDTRVEELRAHAAAHGIEVEAEWTAGRLIAELYDEIG--EPTIID 389

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             ++ D+P  E +   K+                  + +D       +++LV  G E A+
Sbjct: 390 PTFVCDYPV-EVSPLAKR------------------RRDDPR--LTHRFELVIAGHEYAN 428

Query: 494 GGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
                +      + F      K    +          RA + GMPP GGI  G+DR+VML
Sbjct: 429 AFSELNDPVDQAERFRRQVEEKASGDDEAMEYDADFIRALEYGMPPAGGIGIGVDRVVML 488

Query: 550 LLGAKNVREVSLFPMSQ 566
           L  + ++R+V LFP  +
Sbjct: 489 LTNSASIRDVLLFPHMR 505


>gi|325978710|ref|YP_004288426.1| asparaginyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325178638|emb|CBZ48682.1| asparaginyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 448

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 76/365 (20%), Positives = 134/365 (36%), Gaps = 47/365 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
              VG  V +  WV      G I FL +RD       V   P+          +  F   
Sbjct: 12  KDHVGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKFGEEEGTEKFNTI 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + I G+V   S             EL    +EI+  +E+ P+     +E+  
Sbjct: 72  KHLNQETSILITGIVKEDSRSKF-------GYELDVTDLEIVGHSEDYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                +R L LR       +  R  II +         FI+  +PIL+ ++ E + +   
Sbjct: 122 DFLMDHRHLWLRSRKQMAIMQVRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                 G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S
Sbjct: 182 TDYF--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRY 286
           F+  ++ L+  E  ++ + +   +                   ++  F R+ YDDAI   
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAISLL 298

Query: 287 GTDKPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
              + D       L +     +  E ++ + F V + +++    ++ + +    G   R 
Sbjct: 299 QEHENDEDADYEHLEHGDDFGSPHETWISNYFGVPTFVINYPASFKAFYMKPVPGNPERV 358

Query: 340 FCDRM 344
            C  +
Sbjct: 359 LCADL 363



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 51/142 (35%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVIN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R      ++     + + K   E          + G  PH G   GI+R+V  
Sbjct: 371 EIIGGSVREDDYNALVAKMDALEMDKSEYE----FYLDLRKYGSVPHAGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|289740395|gb|ADD18945.1| asparaginyl-tRNA synthetase [Glossina morsitans morsitans]
          Length = 558

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 64/339 (18%), Positives = 127/339 (37%), Gaps = 22/339 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G+ + G  +R+ GWVHR+R  G  +IF+ +RD  G  Q V          A ++ +E  +
Sbjct: 130 GLDNRGKRIRIYGWVHRLRRQGKGLIFITLRDGTGFLQCVLTDRLCQTYDALTLTTESSV 189

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G++              G  EL     E++ +A           E    ++   R +
Sbjct: 190 QLFGILKQVPEG----KSAPGGHELHVDYWELIGLAPAGGAESILNEEAHPDVQLDNRHI 245

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R+ ++ + R       + E + P L  +  EG          ++ ++
Sbjct: 246 MIRGENTSKVLKMRSVVMQAFRGHYFDRGYCEVTPPTLVQTQVEGGSTLFKLQYFSEEAY 305

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  D++L+
Sbjct: 306 --LTQSSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHIEAECPFITFDELLD 362

Query: 252 TMENVLRGVFEEFSNGNT-------------VSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            +E+++  V +                        F R+ Y DAI+    D    ++   
Sbjct: 363 RLEDLVCDVVDRVLKSTWGDVVYELNPDFKPPKKPFKRMNYADAIKWL-KDNNVTKDDGT 421

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            +   E    +  R  +  ++       +    K    +
Sbjct: 422 FYEFGEDIPEAPERKMTDTINEPIMLCRFPKDIKSFYMS 460



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R + +E +L+ +   GI  +     +         G  PHGG   G+
Sbjct: 475 LLPNVGEIVGGSMRIYDNEDLLRGYKREGIDPKP----YYWYTDQRAYGTQPHGGYGLGL 530

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R++  LL   ++REV L+P 
Sbjct: 531 ERLLCWLLNRYHIREVCLYPR 551


>gi|322712478|gb|EFZ04051.1| aspartate-tRNA ligase [Metarhizium anisopliae ARSEF 23]
          Length = 913

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 64/317 (20%), Positives = 129/317 (40%), Gaps = 22/317 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHY-GITQVVANPDSACF 59
           H Y  +   +L    +G+ V     +   R     + FL  RD    +  V++       
Sbjct: 144 HPYELNPIAELDKLPLGTEVNFRARISTQRQLSKNLDFLLFRDQTNTVQGVLSREYLDMV 203

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              + + SE ++ ++G V+    E + +   +G +E+    I +++ A   P   +    
Sbjct: 204 RWVQKLNSESLVQVNG-VLKAPPEAVRSATHSG-VEVEVHSIHLVNAAHGAPFTNYKP-- 259

Query: 120 YPESIRFKY--RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            PE++R +   R LDLR  +       R+ +    R  +  + F+E +TP L  ++ E  
Sbjct: 260 -PETLRNRMTSRILDLRHPSNQALFRIRSMVTRMFRETLEQQGFVEINTPKLQPAATESG 318

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                 +   + +F A  Q+PQ  KQ  +++ F R +++ P FR E+  + R   E+  L
Sbjct: 319 AAVFKVNYFGRNAFLA--QSPQLAKQSAVSADFGRVYEVGPVFRAENSNTHRHLTEYTGL 376

Query: 238 DMEMSF-VEQDDILNTMENVLRGVF---------EEFSN-GNTVSNNFLRICYDDAIRRY 286
           D+EMS   +  +++  ++  L+ VF         +E      +    +L           
Sbjct: 377 DIEMSIEHDYHEVICVIDEFLKNVFTSVYAMPEVKEVQKRWPSKEFKWLEETLILNFEDG 436

Query: 287 GTDKPDLRNPIIMHNVT 303
                D    + M +++
Sbjct: 437 IQMLRDDGRDVEMEDLS 453



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 15/139 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   +  PF   +                  +D+   G EI SGG R H +  + +    
Sbjct: 477 KFPASARPFYTHKD--------PENPFWTRSFDIFIRGQEICSGGQRIHDAAELRENMQA 528

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF---PMSQN 567
           VGIS++ +E+       AF  G PPH G   G++RIV  +L   +VR  SLF   P S  
Sbjct: 529 VGISEDGMED----YLAAFDLGAPPHAGAGLGLERIVAWMLELGDVRYASLFHRDPKSLP 584

Query: 568 FCDLLMGSPSTVSVEQLRE 586
                +  P   + + LR+
Sbjct: 585 ERAPGLPHPDADTTKPLRD 603


>gi|24379727|ref|NP_721682.1| asparaginyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|290580275|ref|YP_003484667.1| putative asparaginyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|38258370|sp|Q8DTM2|SYN_STRMU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|24377687|gb|AAN58988.1|AE014965_9 putative asparaginyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|254997174|dbj|BAH87775.1| putative asparaginyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 448

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 61/308 (19%), Positives = 109/308 (35%), Gaps = 24/308 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
            + VG  V +  WV      G I FL +RD       V   P+             F   
Sbjct: 12  KNHVGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKFGEEAGLEKFNTI 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + I G+V                 EL A  ++++  ++  P+     +E+  
Sbjct: 72  KHLNQETAIEIKGIVKEDKRSKF-------GYELDATDLKVIGTSDNYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                +R L LR       +  R  +I +         F++  +PIL+ ++ E   D   
Sbjct: 122 DFLMDHRHLWLRSRKQMAIMQIRNAVIYASYEFFDQNGFVKFDSPILSGNAAENTTDLFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                + +F  L Q+ Q Y +   A  F R F   P FR E  ++ R   EF+ +D E  
Sbjct: 182 TDYFGEPAF--LSQSGQLYLE-AGAMAFGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYP 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  +  L+  E  ++ + +   +    +   L    D   +        +     +  +
Sbjct: 239 FMSHEQSLDLQEAYVKTLIQGVLDRAPQALGILERDTDLLRKYIAQPFKRVSYDDAITLL 298

Query: 303 TEHFVHSE 310
            EH    +
Sbjct: 299 QEHEEDED 306



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  + +   DLL+ + +         
Sbjct: 324 TWISNYFGIPTFVVN-----YPASLKAFYMKPVPGNPDRVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R      +L      G++     + +       Q G  PH G   G++R+V  
Sbjct: 371 EIIGGSERETDYNTLLAKIKENGLNP----DDYAFYLDLRQYGSVPHCGFGLGLERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +  + 
Sbjct: 427 VAGTKHIREAIPFPRMLHRIEP 448


>gi|317013602|gb|ADU81038.1| lysyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 501

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 12/261 (4%)

Query: 8   SCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
              DL    D      + G V  +R  G   F+ I D   I Q   + +    E  KS++
Sbjct: 44  YVKDLEEPKDKEKCESVVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDE-FKSLK 102

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L +  +V+    +       TG++ + A +  ILS    +PLP          +R+
Sbjct: 103 KH--LEVGDIVL---VKGFPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRY 156

Query: 127 KYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+LDL  +  +     KR+ I++S+R     E F+E  TP++        AR F+   
Sbjct: 157 RQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYH 216

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              +   Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++ 
Sbjct: 217 NALEIERY-LRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYH 274

Query: 245 EQDDILNTMENVLRGVFEEFS 265
             +D++   + +   + +  +
Sbjct: 275 TYEDLIELSKRLFDYLLKTLN 295



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   GMPP  G   GIDR+VMLL GAK++++V LFP  +
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMR 489


>gi|188588043|ref|YP_001919588.1| asparaginyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|226695285|sp|B2UXS0|SYN_CLOBA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|188498324|gb|ACD51460.1| asparaginyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 464

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 75/446 (16%), Positives = 143/446 (32%), Gaps = 72/446 (16%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             V +SGW+  +R      F++I D       QVV +     F+    +     + + G 
Sbjct: 20  KEVMISGWIRTLRASNAFGFIEINDGSFFKNIQVVFDDKLGNFKEISKLPISSSISVVGT 79

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +++               E+ A++I I  ++     P+  +R   E +R     L  R +
Sbjct: 80  LVATPD-------AKQPFEIQAKEIVIEGMSNSDY-PLQKKRHTFEYLR-SIAHLRPRSN 130

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------- 189
                   R+    ++      + F+   TPI+T S  EGA +    + ++         
Sbjct: 131 AFSATFRVRSVAAFAIHKFFQEQGFVYTHTPIITGSDCEGAGEMFRVTTLDPKAPELTKE 190

Query: 190 -------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+          Q      A  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 191 GNIDYTKDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSNTTRHAAEFWMIEP 250

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RIC 278
           E++F +  D +   E +L+ V +   +       F                      ++ 
Sbjct: 251 EIAFADLQDDMELAEAMLKYVIKYVMDECPEELQFFNSFVDKGLLERLNHVVSSDFAKVT 310

Query: 279 YDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
           Y +A+        +    +   +   TEH  +     F K L V    +           
Sbjct: 311 YTEAVEILEKCDKEFDYDVSWGIDLQTEHERYLTEEHFKKPLFVTDYPKEI--------- 361

Query: 337 NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
            +AF  RMNE  ++     L          G    +G   +   +   EA    L ++  
Sbjct: 362 -KAFYMRMNEDNKTVAATDLLV-------PGIGEIIGGSQREERLDVLEARMAELGLKKE 413

Query: 397 DSCFFI----AGDPLKFCSFAADARN 418
           D  +++     G+           R 
Sbjct: 414 DYWWYLELRKYGETKHAGFGLGFERL 439



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 55/146 (37%), Gaps = 26/146 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P     +E K        F M           D  ++ A  
Sbjct: 339 HERYLTEEHFKKPLFVTDYP-----KEIK-------AFYMRMNE-------DNKTVAAT- 378

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  EI  G  R    +V+    + +G+ K      +       + G   H G  
Sbjct: 379 -DLLVPGIGEIIGGSQREERLDVLEARMAELGLKK----EDYWWYLELRKYGETKHAGFG 433

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G +R++M + G  N+R+V  FP + 
Sbjct: 434 LGFERLIMYITGMTNIRDVIPFPRTP 459


>gi|85000713|ref|XP_955075.1| lysine-tRNA ligase [Theileria annulata strain Ankara]
 gi|65303221|emb|CAI75599.1| lysine-tRNA ligase, putative [Theileria annulata]
          Length = 470

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 70/335 (20%), Positives = 129/335 (38%), Gaps = 29/335 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRV-RPHGGIIFLDIRDHYGITQVVAN-----PDSACF-EIAK 63
           + G       V ++G V R+      + FLDI+      QV AN     P +  F +   
Sbjct: 14  EAGEHLENELVSIAGRVSRIASSSSKLRFLDIKSEGTKLQVFANFANHDPSTGDFNDTYN 73

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +++   ++ + G                G++ +  + ++ILS    +    FG ++    
Sbjct: 74  NIKRGDIIGLTG---------FPGKSKRGELSVFPKSVKILSPCLHMLPDKFGLKDND-- 122

Query: 124 IRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
           +RF+ R+LDL  +    K +  R+RII+ +R  + +  F E  TP+L T S+   A+ F+
Sbjct: 123 VRFRQRYLDLMMNDDSLKVMKLRSRIIDYLRKFLTSRGFFEVETPMLKTTSTGASAKPFI 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     + +  AP+   +L++  GF++ F+I  CFR+E       P EF   +   
Sbjct: 183 THHNELDLDLF-MRIAPELPLKLIIIGGFEKVFEIGKCFRNEGIDPTHNP-EFTSCEFYW 240

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E +L  +  E             I Y            D   P    +
Sbjct: 241 AYADYHDLMKLTEELLSSLVFELFGKY-------EITYHPDGPEAEGVIIDFTPPFQRVS 293

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
           + E   +      S         E +    K  G 
Sbjct: 294 MVEELENKMKMKLSPPYDSQENVEKYLTAIKEAGL 328



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 44/138 (31%), Gaps = 25/138 (18%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           I     +  +I+DFP               +P +      E++           +++L  
Sbjct: 348 IEDQIVKPTFIVDFP------------QCTSPLSKWHRSKENV---------CERFELFI 386

Query: 487 NGFEIASGGIRNHMSEVM----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
            G E+ +     +          Q      +  +  +        A + G+PP  G   G
Sbjct: 387 CGKELINSYTELNDPITQRECFKQQQKAKDLGDDEAQPPDEAFCTALEYGLPPTAGWGIG 446

Query: 543 IDRIVMLLLGAKNVREVS 560
           IDR+ M L    N++   
Sbjct: 447 IDRLAMFLSDKNNIKVFI 464


>gi|149246568|ref|XP_001527720.1| aspartyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146447674|gb|EDK42062.1| aspartyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 573

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 87/390 (22%), Positives = 146/390 (37%), Gaps = 55/390 (14%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAKS 64
           +  DL  +D G  V     VH+ R  G  ++FL +R    + Q  +  N +     I+K 
Sbjct: 109 NISDLSAADDGKTVVFRARVHKTRQQGATMVFLTLRQQSNLIQALLKTNKEQDNTAISKQ 168

Query: 65  VRSE-------WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           +           ++ ++G V        +A +     E+   KI  +    E    +  +
Sbjct: 169 MVKWAGGINLESIVLVEGKVAKVDELVKSATV--QDAEIHITKIFTIQETPEQLPLLIED 226

Query: 118 REYPE-------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
               E               R   R +DLR  T       ++ +    R  +  + F E 
Sbjct: 227 ASRTEQEAEELGLPVVNLDTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLTKKKFTEI 286

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP +  ++ EG  +    +     +F A  Q+PQ YKQ L+A  F+R F+IAP FR E+
Sbjct: 287 HTPKIIGAASEGGSNVFEINYFKGSAFLA--QSPQLYKQQLIAGDFERVFEIAPVFRAEN 344

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEF-----SNGNTVSNNFL--- 275
             + R   EF  LD+EM+F E  D +L  +E +   +F E         +TV   F    
Sbjct: 345 SNTHRHMTEFTGLDLEMAFEEHYDEVLEVLEELFVFIFTELKMRFGKEIDTVRRQFPVEE 404

Query: 276 -RICYDDAIRRYGT---------------DKPDL--RNPIIMHNVTEHFVHSEFRVFSK- 316
            +I  D  + +                  D  DL   N  ++  +      ++F +  K 
Sbjct: 405 FKIPKDGKMVKLHFKEGVAMLREAGKEVGDYEDLSTENERLLGKLVREKYDTDFYILDKF 464

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
            L++ P Y +          +  F  R  E
Sbjct: 465 PLAIRPFYTMPDAEDPNYSNSYDFFMRGEE 494



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 12/119 (10%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF TMP     +          +  YD    G EI SG  R H  E++ +   
Sbjct: 463 KFPLAIRPFYTMPDAEDPNY---------SNSYDFFMRGEEILSGAQRIHDPELLKERMR 513

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
              +   V          AF  G PPH G   G++R+VM  L  KN+R  SLFP     
Sbjct: 514 AHEVDPNV--PGLNDYVDAFTYGCPPHAGGGIGLERVVMFFLDLKNIRRASLFPRDPKR 570


>gi|187735301|ref|YP_001877413.1| lysyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187425353|gb|ACD04632.1| lysyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 493

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 9/250 (3%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              V ++G +  +R  G   F  I D  G  Q   + +    E+ ++    W L   G  
Sbjct: 55  DKQVAVAGRLLAIRDMGKSQFFVIGDVRGKIQGFLHKN----EVDETTWKLWKLLDRGDW 110

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +     T      TG+  +    + ILS +   PLP        + + ++ R LDL  + 
Sbjct: 111 VGIRGTTFLTR--TGEPTVKVSGLTILSKSLR-PLPDKWHGLADKEVTYRKRHLDLISNE 167

Query: 138 LHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
              +  V R+ +I  +R  +    ++E  TP+L   +   A                L  
Sbjct: 168 ESASLFVTRSLMIAEIRRFLQERGYLEVETPMLQDVAGGAAAKPFETYHNALDMPLTLRI 227

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + + LM  GF + F++   FR+E     R   EF  L+   +  + + + N +E +
Sbjct: 228 APELFLKRLMVGGFTKIFELNRSFRNEGID-RRHNPEFTMLEAYCACGDFETMANMVEEL 286

Query: 257 LRGVFEEFSN 266
           +  + E+F  
Sbjct: 287 ICHLAEKFCG 296



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 23/138 (16%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           ++       C++                  H    +      + +  D++ +    Y+LV
Sbjct: 372 LVEEKTMNPCFVT-----------------HVAKDLVPLAKLNRENPDVVDV----YELV 410

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
            NG EI+ G    +  +V  +   +    +    +         + GMP  GGI  GIDR
Sbjct: 411 INGQEISPGYSELNDPDVQKERLEHQAAGETQRVDY--DFIETLEYGMPSAGGIGIGIDR 468

Query: 546 IVMLLLGAKNVREVSLFP 563
           +VM+L GA ++R+V LFP
Sbjct: 469 VVMMLTGASSIRDVLLFP 486


>gi|46110188|ref|XP_382152.1| hypothetical protein FG01976.1 [Gibberella zeae PH-1]
          Length = 1033

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 63/283 (22%), Positives = 121/283 (42%), Gaps = 14/283 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACF 59
           +H    ++   L     G+ V     +   RP   ++ FL +RD     Q V   D+   
Sbjct: 259 VHPGEINTIAQLDTLPFGTEVTFRARIETQRPISKVLDFLLLRDQTHSVQGVLARDAGNA 318

Query: 60  EIAKSVRSE---WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           +    VR      ++ I G  + +  E I +   +G +E++   + ++++A       F 
Sbjct: 319 DFISWVRKINSESLVQITGT-LKQPPEPIRSATHSG-VEVAVDSVHLVNLA---QNLPFS 373

Query: 117 EREYPESIRFKY--RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
             + PE++R +   R LDLR  +       R  +    R  +    F+E +TP L  ++ 
Sbjct: 374 NYKPPETLRNRMNARILDLRHPSNQALFRVRAMVTRVFRNTLEEHGFVEINTPKLQPAAT 433

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           E        +   + +F A  Q+PQ  KQ  +++ F R F++ P FR E+  + R   E+
Sbjct: 434 ESGAAVFPVNYFGRRAFLA--QSPQLAKQEAISADFGRVFEVGPVFRAENSNTHRHLTEY 491

Query: 235 YQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
             LD+EM+   +  ++++ ++  L+ VF        +     R
Sbjct: 492 TGLDLEMAIDTDYHEVISFIDIFLKEVFRTVYASRELEVIRKR 534



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 14/132 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF   +         D    ++  +D+   G EI SGG R H  + +    + 
Sbjct: 595 KFPANARPFYTAKD------PEDPTWTRS--FDIFIRGQEICSGGQRIHNVDELRANMAE 646

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G++++ +E+       AF+ G PPH G   G++RIV  +L   +VR  SLF        
Sbjct: 647 AGMAEDGMED----YLTAFELGAPPHAGAGLGLERIVAWMLELGDVRYASLFHRDPKS-- 700

Query: 571 LLMGSPSTVSVE 582
           L   +P     E
Sbjct: 701 LPTKAPGLPHPE 712


>gi|253755835|ref|YP_003028975.1| asparaginyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251818299|emb|CAZ56109.1| asparaginyl-tRNA synthetase [Streptococcus suis BM407]
          Length = 448

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 62/305 (20%), Positives = 110/305 (36%), Gaps = 24/305 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G + FL +RD       V   P+          +  F++AK +
Sbjct: 15  VGQEVTIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKFGEEAGTEKFDVAKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  +++ P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKF-------GYELDVTDLEVIGESQDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR          R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G    L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E SF+ 
Sbjct: 185 F--GQLAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLS 241

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            ++ L+  E  ++ + +   +    +   L    D   R        +     +  + EH
Sbjct: 242 HEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRYIAEPFKRVAYDDAITLLQEH 301

Query: 306 FVHSE 310
               +
Sbjct: 302 EADKD 306



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 22/136 (16%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ K   E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDNYDALVSKMDELGMDKSEYE----FYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMS 565
           + G K++RE   FP  
Sbjct: 427 VAGTKHIREAIPFPRM 442


>gi|195345035|ref|XP_002039081.1| GM17026 [Drosophila sechellia]
 gi|194134211|gb|EDW55727.1| GM17026 [Drosophila sechellia]
          Length = 558

 Score =  174 bits (440), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 69/349 (19%), Positives = 133/349 (38%), Gaps = 23/349 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G ++  S V++ GWVHR+R  G  +IF+ +RD  G  Q V N        A ++ +E  +
Sbjct: 130 GTANRDSRVKVYGWVHRLRRQGKSLIFITLRDGTGFLQCVLNDQLCQTYDALTLSTESSV 189

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  EL+    E++  A           E    ++   R +
Sbjct: 190 VLFGTLKLVPEG----KTAPGGHELNVDYWELIGSAPPGGADAILNEEAQPDVQLDNRHI 245

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R+ +  + R    A  + E + P L  +  EG           + ++
Sbjct: 246 MIRGENTSKVLKMRSVVTQAFRAHYEARGYNEVTPPTLVQTQVEGGSTLFKLKYFGEEAY 305

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  +       F I+  +R E  R+ R   E+  ++ E SF+  D++L+
Sbjct: 306 --LTQSSQLYLETCLP-ALGDVFTISQSYRAEQSRTRRHLAEYSHVEAECSFLTFDELLD 362

Query: 252 TMENVLRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            +E+++  V +                +       F R+ Y+DAI+    +    ++   
Sbjct: 363 RLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRRMNYEDAIKWLKENNV-TKDDGT 421

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
            +   E    +  R  +  ++       +    K     R   D R+ E
Sbjct: 422 FYEFGEDIPEAPERKMTDTINEPIMLCRFPAEIKSFYMQRCKEDQRLTE 470



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R + SE +L+ ++ 
Sbjct: 449 RFPAEIKSFYMQRCKEDQRLTESVDV-------LLPNVGEIVGGSMRIYDSEELLKGYAR 501

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI  +     +         G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 502 EGIDPQP----YYWYTDQRVYGTMPHGGYGLGLERFLCWLLNRYHIREVCLYPR 551


>gi|166711570|ref|ZP_02242777.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 464

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 120/385 (31%), Gaps = 54/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D       QVVAN     F+  + + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEIRRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +++    +  +        E+ A  +EI+   E+        +        +   L  R 
Sbjct: 77  VLVKSQGKGQS-------FEIQASGVEIVGWVEDPLTYPIQPKPMTPEFLREVAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +        R  +  ++        F   STPI+T S  EGA      S ++        
Sbjct: 130 NLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMFRVSTLDMVNLPRDA 189

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q           + +   P FR E+  + R   EF+ ++
Sbjct: 190 TGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHLAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNFLRI 277
            E++F +  +     E  L+ VF    +                        ++  F +I
Sbjct: 250 PEIAFADLAEDARLAEQFLKYVFRAVLDERGDDLAFLVERVDKNAISKLEAFINAPFEQI 309

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA++           P+   +   TEH         ++     P   +         
Sbjct: 310 DYTDAVKLLQHAGKTFDFPVEWGLDLQTEHERW-----LTEEHIGRPVVVINYPEHIKAF 364

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 365 YMRLNDDGKTVAAMDVLAPGIGEII 389



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 18/144 (12%)

Query: 439 DFPFYEW-----NEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKAFQYDLVCN 487
           DFP  EW      E E+ +   H       +          ++ ND     A   D++  
Sbjct: 326 DFPV-EWGLDLQTEHERWLTEEHIGRPVVVINYPEHIKAFYMRLNDDGKTVA-AMDVLAP 383

Query: 488 GF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           G  EI  G  R    +V+    +  G+ K      +       + G  PH G   G +R+
Sbjct: 384 GIGEIIGGSQREERLDVLDARMAQFGLDK----EHYSWYRDFRRYGSVPHAGFGLGFERL 439

Query: 547 VMLLLGAKNVREVSLFPMSQNFCD 570
           V+ + G  N+R+   +P +    +
Sbjct: 440 VVYVCGLSNIRDAIPYPRAPGSAE 463


>gi|41406557|ref|NP_959393.1| lysyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
           K-10]
 gi|41394906|gb|AAS02776.1| LysS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 499

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 60/270 (22%), Positives = 114/270 (42%), Gaps = 20/270 (7%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPD 55
           RTH+   +  +             V ++G V   R  G + F  +++  G T QV+ + D
Sbjct: 37  RTHTLAQVRAAHPDLPVDTATDDVVGVAGRVIFARNSGKLCFATLQEGDGTTLQVMVSLD 96

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +++  L   G ++S     I++    G++ + A    + S +        
Sbjct: 97  KVGREALDAWKADVDL---GDIVSVHGTVISSR--RGELSVLADSWRMASKSLRPLP--V 149

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL      + +  +R  +I ++R  +    F+E  TP+L   + 
Sbjct: 150 AHKEMSEEARVRQRYVDLIVRPQARTVARQRIAVIRAIRNALERRGFLEVETPMLQTLAG 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  GFD+ F++   FR+E   S   P E
Sbjct: 210 GAAARPFVTHSNALDIDLY-LRIAPELFLKRCVVGGFDKVFELNRVFRNEGADSTHSP-E 267

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++   DD       +++ V +E
Sbjct: 268 FSMLETYQAYGTYDDSAVVTRELIQEVADE 297



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 26/135 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ DFP                P T     ++             ++DL   G E+A
Sbjct: 381 APTFVRDFP------------VETTPLTRQHRSID---------GVTEKWDLYVRGVELA 419

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G        V  + F+    +    ++           A + GMPP  G   GIDR++M
Sbjct: 420 TGYSELTDPVVQRERFAAQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLM 479

Query: 549 LLLGAKNVREVSLFP 563
            L G  ++RE  LFP
Sbjct: 480 TLTGL-SIRETVLFP 493


>gi|224543536|ref|ZP_03684075.1| hypothetical protein CATMIT_02745 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523538|gb|EEF92643.1| hypothetical protein CATMIT_02745 [Catenibacterium mitsuokai DSM
           15897]
          Length = 461

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 110/312 (35%), Gaps = 14/312 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            +D   +V L GWV   R  G + F+ + D                E  K+      +  
Sbjct: 21  ETDNVEYVELEGWVRTNRDSGKLGFIALNDGSYFRNCQV---VYLEEKLKNFDEVSHIA- 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +    +           E+ A +I +    +        ++ +      +   L  
Sbjct: 77  TGSAIHVLGKLKLTPDAKQPFEVEATEIILEGDCDSDYPLQ--KKRHSFEFMREIPHLRP 134

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF-- 191
           R ++ +     R+ +  ++      + F+   TPI+T++  EGA +    + ++   F  
Sbjct: 135 RANSFYAIFRLRSVLSMAIHEFFQDQGFVYVHTPIITSNDGEGAGEMFRVTTIDDTDFSK 194

Query: 192 -----YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                 A      Q      A  F   +   P FR E+  + R   EF+ ++ E++F + 
Sbjct: 195 DFFEKEAYLTVTGQLHVEAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMVEPEIAFADL 254

Query: 247 DDILNTMENVLRGVFEE-FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           +D +  +E +++   +    N       F ++   D I R    +      +      +H
Sbjct: 255 EDDMCLIEEMVKYCIQYCLDNAPEEMKFFEQMVDHDCINRITKVRDSHFARMTYTEAIDH 314

Query: 306 FVHSEFRVFSKI 317
            + ++ +  +K+
Sbjct: 315 LLKADVKFDNKV 326



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   DL+  G  E+  G  R    +V+ +     G++KE ++          +
Sbjct: 366 NDDNKTVA-ACDLLVPGIGELVGGSQREERYDVLEKLMDEKGMNKETLQ----WYMDLRR 420

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   H G   G DR +M L G  N+R+V  FP +  
Sbjct: 421 FGGCKHAGFGLGFDRFLMYLTGMANIRDVEPFPRTPR 457


>gi|156974183|ref|YP_001445090.1| asparaginyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156525777|gb|ABU70863.1| hypothetical protein VIBHAR_01897 [Vibrio harveyi ATCC BAA-1116]
          Length = 472

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 64/384 (16%), Positives = 122/384 (31%), Gaps = 48/384 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GW+   R    GI FL I D      + A   +       +  +E +    G
Sbjct: 22  VDSEVTVRGWLRSRRDSKAGISFLAIYDGSCFDPIQAVVPNN----LNNYDNEVLKLTTG 77

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       EL+A  ++++   E+       +  +      +   L  R 
Sbjct: 78  CSVEVTGKIVASPAKGQDFELAATNVKVVGWVEDADTYPMAKTRHSIEYLREVAHLRPRT 137

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + +   S P++TAS  EGA +    S ++  +     
Sbjct: 138 NVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRTE 197

Query: 196 QAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +    Y +                    A    + +   P FR E+  + R   EF+ ++
Sbjct: 198 EGKVDYNEDFFGKETFLTVSGQLNGEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVE 257

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RI 277
            E++F + +DI    E++L+ VF+           F                      ++
Sbjct: 258 PEVAFADLNDIAKLSEDMLKYVFKAALEECRDDLEFFAQRIDKEAITRLEKFVSSDFAQV 317

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            Y DAI+       +   P+         + SE   F           V   P       
Sbjct: 318 DYTDAIQILLDSGREFEFPVEWG----IDMSSEHERFLAEEHFKAPVIVKNYPKDIKAFY 373

Query: 338 RAFCDR-MNEWARSQGQPGLAYIF 360
               D      A     PG+  I 
Sbjct: 374 MRLNDDGKTVAAMDVLAPGIGEII 397



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 6/99 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +++ +    +GI                +
Sbjct: 377 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDILDERMREIGIVP----EHMNWYRDLRR 431

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G  PH G   G +R+V  +    NVR+V  FP +    
Sbjct: 432 YGTVPHAGFGLGFERLVSYVTSMGNVRDVIPFPRTPRSA 470


>gi|126002159|ref|XP_001352279.1| GA10495 [Drosophila pseudoobscura pseudoobscura]
 gi|54640540|gb|EAL29381.1| GA10495 [Drosophila pseudoobscura pseudoobscura]
          Length = 557

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 68/345 (19%), Positives = 135/345 (39%), Gaps = 22/345 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G  + GS V++ GWVHR+R  G  +IF+ +RD  G  Q V N        A ++ +E  +
Sbjct: 129 GTENRGSRVKVYGWVHRLRRQGKALIFITLRDGTGFLQCVLNDQLCQTYDALTLSTESTV 188

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  EL+    E++ +A           E    ++   R +
Sbjct: 189 VLFGTLKLIPEG----KTAPGGHELNVDYWELIGLAPPGGADAILNEEAQPDVQLDNRHI 244

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R+ ++ + R   +A  + E + P L  +  EG          ++ ++
Sbjct: 245 MIRGENTSKVLKMRSVVMQAFRAHYLARGYNEVTPPTLVQTQVEGGSTLFKLQYFSEEAY 304

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ----- 246
             L Q+ Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+       
Sbjct: 305 --LTQSSQLYLETCLP-ALGDVFTIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFDDLLD 361

Query: 247 ---DDILNTMENVLR----GVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              D + + ++ VL+     + +E + +    +  F R+ Y DAI+    +    ++   
Sbjct: 362 RLEDLVCDVVDRVLKSPWGNLVKELNPDFKPPTKPFRRMNYSDAIKWLKENNV-TKDDGT 420

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
            +   E    +  R  +  ++       +    K    +R   D+
Sbjct: 421 FYEFGEDIPEAPERKMTDAINEPIMLCRFPAEIKSFYMSRCPEDK 465



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R   SE +L+ +  
Sbjct: 448 RFPAEIKSFYMSRCPEDKTLTESVDV-------LLPNVGEIVGGSMRIFDSEELLKGYQR 500

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI  +     +         G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 501 EGIDPKP----YYWYTDQRIYGTLPHGGYGLGLERFLCWLLNRYHIREVCLYPR 550


>gi|326202576|ref|ZP_08192444.1| asparaginyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325987160|gb|EGD47988.1| asparaginyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 464

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 108/349 (30%), Gaps = 46/349 (13%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
             +G  + + GWV  VR      F+++ D      +    +    E  K V    V    
Sbjct: 15  EYIGKTITVPGWVKTVRDSKTFGFIELNDGTFFRNLQIVFEEGKLENFKEVAKLSV---- 70

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G  +      +         EL A +I I ++          ++ +          L  R
Sbjct: 71  GSSIEVEGILVETPNAKQPFELKANRISIENLCPADYQLQ--KKRHSFEFLRTISHLRPR 128

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +T       R+    ++        F+   TP++T S  EGA      + ++       
Sbjct: 129 TNTFSAVFRVRSLAAFAIHKFFQERGFVYVHTPLITGSDCEGAGQMFRVTTLDMKNPPRT 188

Query: 190 ---------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+    +     Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 189 ENGDIDYSQDFFEKETSLTVSGQLTGEAYAMAFKNIYTFGPTFRAENSNTARHAAEFWMI 248

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F +  D +   E++L+ V             F                       
Sbjct: 249 EPEIAFSDLKDDMMLAEDMLKYVINYVVENAPEEMQFFNSFVDKGLLERLDNVVNSDFAH 308

Query: 277 ICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
           I Y +AI     +K     P+       TEH  +   +V+ K + V   
Sbjct: 309 ITYTEAIEILKKNKDKFEYPVEWGADLQTEHERYITEQVYKKPVFVTDY 357



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 26/139 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P     +E K        F M           D  ++ A   DL+  G  EI
Sbjct: 350 KPVFVTDYP-----KEIK-------AFYMRIND-------DNKTVAAM--DLLVPGVGEI 388

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    +++ +   ++G+SKE  +          + G   H G   G +R +M L 
Sbjct: 389 IGGSQREERLDILEKKMDDMGLSKEDYQ----WYLDLRKYGGTKHAGFGLGFERAIMYLT 444

Query: 552 GAKNVREVSLFPMSQNFCD 570
           G  N+R+V  F  +   C+
Sbjct: 445 GITNIRDVIPFARTTGSCE 463


>gi|251778075|ref|ZP_04820995.1| asparagine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082390|gb|EES48280.1| asparagine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 464

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 75/446 (16%), Positives = 143/446 (32%), Gaps = 72/446 (16%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             V +SGW+  +R      F++I D       QVV +     F+    +     + + G 
Sbjct: 20  KEVMISGWIRTLRASNAFGFIEINDGSFFKNIQVVFDDKLGNFKEISKLPISSSISVVGT 79

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +++               E+ A++I I  ++     P+  +R   E +R     L  R +
Sbjct: 80  LVATPD-------AKQPFEIQAKEIVIEGMSNSDY-PLQKKRHTFEYLR-SIAHLRPRSN 130

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------- 189
                   R+    ++      + F+   TPI+T S  EGA +    + ++         
Sbjct: 131 AFSATFRVRSVAAFAIHKFFQEQGFVYTHTPIITGSDCEGAGEMFRVTTLDPKAPELTKE 190

Query: 190 -------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+          Q      A  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 191 GDIDYTKDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSNTTRHAAEFWMIEP 250

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RIC 278
           E++F +  D +   E +L+ V +   +       F                      ++ 
Sbjct: 251 EIAFADLQDDMELAEAMLKYVIKYVMDECPEELQFFNSFVDKGLLERLNHVVSSDFAKVT 310

Query: 279 YDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
           Y +A+        +    +   +   TEH  +     F K L V    +           
Sbjct: 311 YTEAVEILEKCDKEFDYDVSWGIDLQTEHERYLTEEHFKKPLFVTDYPKEI--------- 361

Query: 337 NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
            +AF  RMNE  ++     L          G    +G   +   +   EA    L ++  
Sbjct: 362 -KAFYMRMNEDNKTVAATDLLV-------PGIGEIIGGSQREERLDVLEARMAELGLKKE 413

Query: 397 DSCFFI----AGDPLKFCSFAADARN 418
           D  +++     G+           R 
Sbjct: 414 DYWWYLELRKYGETKHAGFGLGFERL 439



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 26/150 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P     +E K        F M           D  ++ A  
Sbjct: 339 HERYLTEEHFKKPLFVTDYP-----KEIK-------AFYMRMNE-------DNKTVAAT- 378

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  EI  G  R    +V+    + +G+ K      +       + G   H G  
Sbjct: 379 -DLLVPGIGEIIGGSQREERLDVLEARMAELGLKK----EDYWWYLELRKYGETKHAGFG 433

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R++M + G  N+R+V  FP +    +
Sbjct: 434 LGFERLIMYITGMTNIRDVIPFPRTPGSSE 463


>gi|195333908|ref|XP_002033628.1| GM21429 [Drosophila sechellia]
 gi|194125598|gb|EDW47641.1| GM21429 [Drosophila sechellia]
          Length = 531

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 66/280 (23%), Positives = 114/280 (40%), Gaps = 25/280 (8%)

Query: 9   CGDLGVSDVGS-FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEIAK 63
             +L V  VG   V + G VH  R  G   FL +R      Q +            + A 
Sbjct: 77  VSELSVQ-VGKGLVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGDVISKQMVKFAG 135

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE- 122
           ++  E ++ I    ++ S++    +     +ELS ++I ++S A+        +   PE 
Sbjct: 136 NIPKESIIDIQAKPVAVSSKI--ESCTEQSLELSVEQIFVISQAKAQLPLQIEDASRPEN 193

Query: 123 -------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                          R   R LDLR             +    R  +  + F E  TP +
Sbjct: 194 AEDAEGLNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKI 253

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
            +++ EG  +    S     ++ A  Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R
Sbjct: 254 ISAASEGGANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHR 311

Query: 230 LPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGN 268
              EF  LD+EM+F     ++L+T+ N    +F+   +  
Sbjct: 312 HLTEFVGLDLEMAFKYHYHEVLHTIGNTFTSIFKGLRDKY 351



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                 + +  YD+   G EI SG  R H  E +++   +
Sbjct: 423 KFPLAIRPFYTMPD--------PNNPVYSNSYDMFMRGEEILSGAQRIHDPEYLIERAKH 474

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI      ++      +F+ G PPH G   G++R+VML LG  N+R+ S+FP       
Sbjct: 475 HGIDT----SKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLT 530

Query: 571 L 571
            
Sbjct: 531 P 531


>gi|146320461|ref|YP_001200172.1| asparaginyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253751434|ref|YP_003024575.1| asparaginyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253753335|ref|YP_003026476.1| asparaginyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|166232740|sp|A4W083|SYN_STRS2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|145691267|gb|ABP91772.1| Aspartyl/asparaginyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251815723|emb|CAZ51324.1| asparaginyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251819581|emb|CAR45260.1| asparaginyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|319757852|gb|ADV69794.1| asparaginyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 448

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 62/305 (20%), Positives = 110/305 (36%), Gaps = 24/305 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G + FL +RD       V   P+          +  F++AK +
Sbjct: 15  VGQEVTIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKFGEEAGTEKFDVAKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  +++ P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKF-------GYELDVTDLEVIGESQDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR          R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G    L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E SF+ 
Sbjct: 185 F--GQLAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLS 241

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            ++ L+  E  ++ + +   +    +   L    D   R        +     +  + EH
Sbjct: 242 HEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRYIAEPFKRVAYDDAITLLQEH 301

Query: 306 FVHSE 310
               +
Sbjct: 302 EADKD 306



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 22/136 (16%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ K   E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDNYDALVAKMDELGMDKSEYE----FYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMS 565
           + G K++RE   FP  
Sbjct: 427 VAGTKHIREAIPFPRM 442


>gi|256851160|ref|ZP_05556549.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260660584|ref|ZP_05861499.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282934626|ref|ZP_06339869.1| asparagine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297206025|ref|ZP_06923420.1| asparagine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|256616222|gb|EEU21410.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548306|gb|EEX24281.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281301201|gb|EFA93502.1| asparagine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297149151|gb|EFH29449.1| asparagine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 432

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 71/323 (21%), Positives = 122/323 (37%), Gaps = 28/323 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWV 70
              VG  V++  W+   R  G I+FL +RD         +  +     F++AKS+R E  
Sbjct: 11  PEYVGKEVKMHVWLTDKRSSGKIMFLQLRDGTAFFQGVLLKKDVSEEKFDLAKSLRQEAS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             I G++                 E+    +E++S  E+ P    G +E+       +R 
Sbjct: 71  FYITGVINEDERSHF-------GYEIKISDLELVSNTEDYP---IGNKEHGIDFLLDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R  +IN+       E FI+   PIL  S+PEG  +       +  +
Sbjct: 121 LWLRSRRPFAIMQIRNEMINATYDFFKKEGFIKFDAPILMNSAPEGTTELFHIEYFDNDA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y   + A  F + F   P FR E  ++ R   EF+ ++ EM++  QD+ L
Sbjct: 181 Y--LSQSGQLY-AEVGAEAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAWTHQDESL 237

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           +  E  +  + +                 +  +   G D   LR P    N T       
Sbjct: 238 DVQERYISYLVKRVIEN-----------CEYELNILGRDVEKLR-PAAEGNYTRLKYDDA 285

Query: 311 FRVFSKILSVNPGYEVWAIPAKG 333
            ++           + +  P + 
Sbjct: 286 VKMLQDAGRDFKWGDDFGAPDEA 308



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 53/179 (29%), Gaps = 18/179 (10%)

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
             +G+       D +K    A         + G  +       +  D P +  N      
Sbjct: 272 AAEGNYTRLKYDDAVKMLQDAGR-DFKWGDDFGAPDEAYISEQF--DRPVFIMN-----Y 323

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
             +  PF M +      +      +    Y       EI  G  R    +V+       G
Sbjct: 324 PTSIKPFYMKKDPENPKEYLCADMLAPEGY------GEIVGGSEREENFDVLKAQIEEAG 377

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           ++     + +       + G  PH G   G +R +  +    ++RE   FP   N  + 
Sbjct: 378 LNL----DNYEWYLDLRRYGSVPHSGFGLGFERAITWICHLDHLREAIPFPRMINRMEP 432


>gi|196003370|ref|XP_002111552.1| hypothetical protein TRIADDRAFT_50208 [Trichoplax adhaerens]
 gi|190585451|gb|EDV25519.1| hypothetical protein TRIADDRAFT_50208 [Trichoplax adhaerens]
          Length = 547

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 104/255 (40%), Gaps = 10/255 (3%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G ++  R  G  +IF D+R      QV+A+      +  +   +     I G    
Sbjct: 92  VSIAGRIYAKRASGQKLIFYDLRADSVKVQVMADARQCQQDFLEVNGNIRRGDIVGF--- 148

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
              +        G++ +   +  +LS      +P        +  RF+ R+LDL  +++ 
Sbjct: 149 ---KGNPGKTKKGELSIIPTETTLLSPCL-HMMPHLHFGVKDKETRFRQRYLDLMINSVS 204

Query: 140 K-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
               V R +II  +R   +   F+E  TP++ A +        +    +      L  AP
Sbjct: 205 CSKFVTRAKIIEYIRRYFMNLGFLEVETPMMNAIAGGATAKPFITHHNDLNMDLFLRIAP 264

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  G  R F+I   FR+E       P E+   +  M+F +  D+++  E +L 
Sbjct: 265 ELYLKELVVGGLHRVFEIGKNFRNEGIDLTHNP-EYTSCEFYMAFADYTDLMSITEQLLH 323

Query: 259 GVFEEFSNGNTVSNN 273
           G+ +     + +  +
Sbjct: 324 GMVKSVRGSHQIEYH 338



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 4/86 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++L     EI +     +   V  + F      K   ++           A + 
Sbjct: 444 PGLTERFELFMCKKEIVNAYTELNDPIVQRERFMMQAKDKAAGDDEAQLVDENFCTALEY 503

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVR 557
           G+PP  G   GIDR+VM L  + N++
Sbjct: 504 GLPPTAGWGMGIDRVVMFLTDSNNIK 529


>gi|125810817|ref|XP_001361642.1| GA17710 [Drosophila pseudoobscura pseudoobscura]
 gi|54636818|gb|EAL26221.1| GA17710 [Drosophila pseudoobscura pseudoobscura]
          Length = 530

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 66/312 (21%), Positives = 120/312 (38%), Gaps = 29/312 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEIAKSVR 66
           +L        + + G VH  R  G   FL +R      Q +            + A ++ 
Sbjct: 79  ELSSHLEKGLLWVRGRVHTSRSKGKQCFLILRQQSSTVQCILAVGDIISKQMVKFAGNIP 138

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ I    +S   +  +    T  +EL  ++I ++S A+        +   PE    
Sbjct: 139 KESIIDIQAKPVSVPNKIESCTEQT--LELCVEQIFVISQAKAQLPLQIEDASRPENADD 196

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R LDLR             +    R  +  + F E  TP + +++
Sbjct: 197 DGLNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAA 256

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +    S     ++ A  Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   E
Sbjct: 257 SEGGANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTE 314

Query: 234 FYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           F  LD+EM+F     ++L+T+ N    +F+   +  +          +   ++Y  D   
Sbjct: 315 FVGLDLEMAFKYHYHEVLHTIGNTFTAIFKGLRDNYSRE-------IESVGQQYKVDAFK 367

Query: 293 LRNPIIMHNVTE 304
              P ++   +E
Sbjct: 368 FLEPPLILQFSE 379



 Score =  106 bits (265), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                S  +  YD+   G EI SG  R H  E +++   +
Sbjct: 422 KFPLAIRPFYTMPD--------PSNSTYSNSYDMFMRGEEILSGAQRIHDPEYLIERAKH 473

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI       +      +F+ G PPH G   G++R+VML LG  N+R+ S+FP       
Sbjct: 474 HGIDTT----KIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLT 529

Query: 571 L 571
            
Sbjct: 530 P 530


>gi|322411433|gb|EFY02341.1| asparaginyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 448

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 62/305 (20%), Positives = 109/305 (35%), Gaps = 24/305 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+          +A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQAVAFKPNFIERFGEEEGAAKFDTIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 75  SQETSVFVKGIVKEDERSKF-------GYELDVTDIEVIGESQDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E   +      
Sbjct: 125 MDNRHLWLRSRRQAAIMQIRNAIIYASYEFFDQNGFIKFDSPILSGNAAENTTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +F  L Q+ Q Y +  M     R F   P FR E  ++ R   EF+ +D E  F+ 
Sbjct: 185 FGNPAF--LSQSGQLYLEAGM-MALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYPFLS 241

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            ++ L+  E  ++ + +   +    +   L    D   +        +     +  + EH
Sbjct: 242 HEESLDLQEAYVKAMIQGVLDRAPQALETLERDTDLLKKYIAEPFKRVAYDDAISLLQEH 301

Query: 306 FVHSE 310
               +
Sbjct: 302 ASDED 306



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 51/142 (35%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNEERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R      +L      G++ +     +       + G  PH G   G++R+V  
Sbjct: 371 EIIGGSERETDYNKLLAKIEEEGLNPDD----YAFYLDLRKYGSVPHCGFGLGLERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|251782082|ref|YP_002996384.1| asparaginyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390711|dbj|BAH81170.1| asparaginyl-tRNA synthetase AsnS [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323126943|gb|ADX24240.1| asparaginyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 448

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 61/305 (20%), Positives = 108/305 (35%), Gaps = 24/305 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+          +  F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQAVAFKPNFIERFGEEEGADKFDTIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 75  SQETSVFVKGIVKEDERSKF-------GYELDVTDIEVIGESQDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E   +      
Sbjct: 125 MDNRHLWLRSRRQAAIMQIRNAIIYASYEFFDQNGFIKFDSPILSGNAAENTTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +F  L Q+ Q Y +  M     R F   P FR E  ++ R   EF+ +D E  F+ 
Sbjct: 185 FGNPAF--LSQSGQLYLEAGM-MALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYPFLS 241

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            ++ L+  E  ++ + +   +    +   L    D   +        +     +  + EH
Sbjct: 242 HEESLDLQEAYVKAMIQGVLDRAPQALETLERDTDLLKKYIAEPFKRVAYDDAISLLQEH 301

Query: 306 FVHSE 310
               +
Sbjct: 302 ASDED 306



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 51/142 (35%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNEERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R      +L      G++     + +       + G  PH G   G++R+V  
Sbjct: 371 EIIGGSERETDYNKLLAKIEEEGLNP----DDYAFYLDLRKYGSVPHCGFGLGLERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|209694860|ref|YP_002262788.1| asparaginyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|208008811|emb|CAQ79014.1| asparaginyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 466

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 69/388 (17%), Positives = 128/388 (32%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVL 71
           V S V + GW+   R    GI FL I D      + A    + ++   E+ K      V 
Sbjct: 16  VDSEVTVRGWIRSRRDSKAGISFLAIYDGSCFDPIQAVVPNDLNNYNEEVLKLTTGCSV- 74

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +++  A+           EL+A  ++++ + E+       +  +      +   L
Sbjct: 75  EVTGTIVASPAKG-------QDFELAATAVKVVGLVEDPDTYPMAKTRHSIEYLREVAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---- 187
             R + +      R  +  ++      + ++  S P++T+S  EGA +    S ++    
Sbjct: 128 RPRTNVIGAVARVRNCLSQAIHRFYHEQGYLWMSAPLITSSDAEGAGEMFRVSTLDHANV 187

Query: 188 ----------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PLDDKGNVDYDKDFFGKETFLTVSGQLNAETYACALSKVYTFGPTFRAENSHTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNN 273
           + ++ E++F + DD+    E++L+ VFE                            VS++
Sbjct: 248 WMVEPEVAFADLDDVAKLAEDMLKYVFEAVLAERRDDLEFFASRIDKEAITRLEQFVSSD 307

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           F ++ Y DAI+            +         + SE   F           V   P   
Sbjct: 308 FAQVDYTDAIQILIDSGKKFEFDVEWG----IDMSSEHERFLAEEHFKAPVIVKNYPKDI 363

Query: 334 GGGNRAFCDR-MNEWARSQGQPGLAYIF 360
                   D      A     PG+  I 
Sbjct: 364 KAFYMRQNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 6/102 (5%)

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           ++ ND     A   D++  G  EI  G  R    +V+      +GI              
Sbjct: 368 MRQNDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDARMIEMGIDP----EHMTWYRD 422

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 423 LRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464


>gi|260184518|ref|ZP_05761992.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|289445193|ref|ZP_06434937.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis CPHL_A]
 gi|289418151|gb|EFD15352.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis CPHL_A]
          Length = 505

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 60/270 (22%), Positives = 110/270 (40%), Gaps = 20/270 (7%)

Query: 5   RTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPD 55
           RTH+  ++  +             V ++G V   R  G + F  ++D  G   QV+ + D
Sbjct: 38  RTHTLAEVRAAHPDLPIDTATEDIVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLD 97

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                   + +++  L   G ++      I++    G++ + A    I   A+ L     
Sbjct: 98  KVGQAALDAWKADVDL---GDIVYVHGAVISSR--RGELSVLADCWRI--AAKSLRPLPV 150

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL  R         R  ++ ++R  +    F+E  TP+L   + 
Sbjct: 151 AHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVLQTLAG 210

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F   S       Y L  AP+ + +  +  GFD+ F++   FR+E   S   P E
Sbjct: 211 GAAARPFATHSNALDIDLY-LRIAPELFLKRCIVGGFDKVFELNRVFRNEGADSTHSP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++   DD       +++ V +E
Sbjct: 269 FSMLETYQTYGTYDDSAVVTRELIQEVADE 298



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 26/135 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ DFP                P T     +              ++DL   G E+A
Sbjct: 386 APTFVKDFP------------VQTTPLTRQHRSIP---------GVTEKWDLYLRGIELA 424

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G        V  + F++   +    ++           A + GMPP  G   GIDR++M
Sbjct: 425 TGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLM 484

Query: 549 LLLGAKNVREVSLFP 563
            L G  ++RE  LFP
Sbjct: 485 SLTGL-SIRETVLFP 498


>gi|47575822|ref|NP_001001255.1| lysyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
 gi|45768826|gb|AAH67987.1| lysyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
          Length = 578

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 60/276 (21%), Positives = 116/276 (42%), Gaps = 14/276 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           + +Y     GD     +   V ++G +H  R  G  +IF D+R      QV+AN  S  +
Sbjct: 95  IQKYNNLQTGD----QLSEVVSIAGRIHAKRISGAKLIFYDLRGEGTKLQVMAN--SRFY 148

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  +   +       G ++             G++ +   ++ +LS      LP      
Sbjct: 149 KSEEEFATINNKLRRGDLIGVKGNP--GKTKKGELSIIPHEMILLSPCL-HMLPHLHFGL 205

Query: 120 YPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
             +  R++ R+LDL   D + +  + R ++I  +R  +    F+E  TP++        A
Sbjct: 206 KDKETRYRQRYLDLILNDYVRQKFIVRAKLITYLRKFLDDLGFLEIETPMMNVIPGGAVA 265

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F+          Y +  AP+ Y ++L+  G DR ++I   FR+E       P EF   
Sbjct: 266 KPFITYHNELDMKLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTC 323

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +  M++ +  D++   E +L G+ +  + G  V  +
Sbjct: 324 EFYMAYADYYDLMEITEKLLSGMVKHITGGYKVIYH 359



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      + F +   +K   ++           A +
Sbjct: 464 EKGLTERFELFVMKKEICNAYTELNDPVRQRELFEDQAKAKAAGDDEAMFIDETFCTALE 523

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 524 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMK 559


>gi|262203856|ref|YP_003275064.1| lysyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262087203|gb|ACY23171.1| lysyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 507

 Score =  174 bits (440), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 58/266 (21%), Positives = 106/266 (39%), Gaps = 18/266 (6%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTH+   +             G  V ++G V  +R  G + F  +++  G         +
Sbjct: 40  RTHTLAQIRADHPDLEAGTETGEHVGVAGRVIFLRNKGKLCFATLQEGDGTQLQAMVSFN 99

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E  +S+         G ++  S E I++   TG++ + A++ E+ S +         
Sbjct: 100 GVGE--ESLARWKAEVDLGDIVFISGEVISSR--TGELSVMAERWEMASKSLRPLP--VA 153

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
            ++  E  R + R++DL  R         R  +I  +R  +    F+E  TP+L      
Sbjct: 154 HKDMNEETRVRQRYVDLIMRPEARSIARTRISVIAELRAALGRRGFLEVETPMLQTLHGG 213

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+  S       + L  AP+ + +  +  G +R F+I   FR+E   S   P EF
Sbjct: 214 AAARPFVTHSNAFDMDLF-LRIAPELFLKRCVVGGIERVFEINRNFRNEGADSTHSP-EF 271

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGV 260
             L+   ++   DD       +++ V
Sbjct: 272 AMLETYQAYGTYDDAATMTRELVQEV 297



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 55/154 (35%), Gaps = 28/154 (18%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                 + + +  +     +  +I DFP      E   +  AH                 
Sbjct: 372 GKLVEELWEHM--VGEKLTQPVFIRDFPV-----ETSPLVRAHR---------------- 408

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAF 529
            +     ++DL   GFE+A+G        +  + F +        ++    L      A 
Sbjct: 409 SVPGVVEKWDLYVRGFELATGYSELVDPIIQRERFVDQARLAAAGDDEAMALDEEFLAAM 468

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + GMPP  G   GIDR++M L G   +RE  LFP
Sbjct: 469 EYGMPPTAGTGMGIDRLLMALTGLG-IRETILFP 501


>gi|288905680|ref|YP_003430902.1| asparaginyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|288732406|emb|CBI13978.1| asparaginyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
          Length = 448

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 76/365 (20%), Positives = 134/365 (36%), Gaps = 47/365 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
              VG  V +  WV      G I FL +RD       V   P+          +  F   
Sbjct: 12  KDHVGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKFGEEEGTEKFNTI 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + I G+V   S             EL    +EI+  +E+ P+     +E+  
Sbjct: 72  KHLNQETSILITGIVKEDSRSKF-------GYELDVTDLEIVGHSEDYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                +R L LR       +  R  II +         FI+  +PIL+ ++ E + +   
Sbjct: 122 DFLMDHRHLWLRSRKQMAIMQVRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                 G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S
Sbjct: 182 TDYF--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRY 286
           F+  ++ L+  E  ++ + +   +                   ++  F R+ YDDAI   
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAISLL 298

Query: 287 GTDKPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
              + D       L +     +  E ++ + F V + +++    ++ + +    G   R 
Sbjct: 299 QEHENDEDADYEHLEHGDDFGSPHETWISNYFGVPTFVINYPASFKAFYMKPVPGNPERV 358

Query: 340 FCDRM 344
            C  +
Sbjct: 359 LCADL 363



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 52/142 (36%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVIN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     + + K   E          + G  PH G   GI+R+V  
Sbjct: 371 EIIGGSVREDDYDALVAKMDALEMDKSEYE----FYLDLRKYGSVPHAGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|241957629|ref|XP_002421534.1| asparagine--tRNA ligase, putative; asparaginyl-tRNA synthetase,
           cytoplasmic, putative [Candida dubliniensis CD36]
 gi|223644878|emb|CAX40876.1| asparagine--tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 552

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 62/310 (20%), Positives = 117/310 (37%), Gaps = 26/310 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
              + + V + GWVHR+R   G+ F+ +RD  G  Q V   D A  +  + +  E  + I
Sbjct: 123 KDHLDTRVLVQGWVHRLRVQKGLAFITLRDGTGYLQCVLTGDLAKAKQTQELTIESTVSI 182

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFL 131
            G++              G +EL A   +I+++A   +       +     ++    R L
Sbjct: 183 KGVISKLPEG----KTAPGGVELKADHYQIIALAPSGDESFTNKVQENADPNLLLDQRHL 238

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR ++L   +  R     ++R     E   E + P +  +  EG           + ++
Sbjct: 239 ALRGESLSAVMKVRAAYSAAIRRFFAEEGLTEVTPPCMVQNQVEGGSTLFKLDYYGEEAY 298

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  +AS     + I   FR E   + R   E+  ++ E+ F+  +D+L 
Sbjct: 299 --LTQSSQLYLETCLAS-LGDVYCIQESFRAEKSHTRRHLSEYTHIEAELVFITFEDLLT 355

Query: 252 TMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRR---YGTDKPDLR 294
            +E +L    +                 +       F R+ Y +A+     +G    D  
Sbjct: 356 HLEKLLSKTIQYVLEDPVAGPIVKQLNPDFKAPKAPFKRMEYIEALDWLNEHGIPNEDGE 415

Query: 295 NPIIMHNVTE 304
                 ++ E
Sbjct: 416 KFKFGDDIAE 425



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R    + ++ A   
Sbjct: 443 RFPAEIKSFYMQRCKDDPRVTESVDV-------LMPNVGEITGGSMRIDNYDELMAALKR 495

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             ++     + +       + G  PHGG   G++R +  +L    VR+ SL+P     C 
Sbjct: 496 ENLNL----DSYYWFTDVRKYGSAPHGGYGIGLERQLAYMLNRYTVRDCSLYPRFTGRCK 551

Query: 571 L 571
            
Sbjct: 552 P 552


>gi|300783136|ref|YP_003763427.1| lysyl-tRNA synthetase, class II [Amycolatopsis mediterranei U32]
 gi|299792650|gb|ADJ43025.1| lysyl-tRNA synthetase, class II [Amycolatopsis mediterranei U32]
          Length = 1107

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 107/256 (41%), Gaps = 14/256 (5%)

Query: 10  GDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           GDL   +  G  VR++G V  +R  GG+ F  ++D  G  Q++             +   
Sbjct: 658 GDLAPDTTTGHRVRIAGRVLNLRILGGLCFARVKDFSGEIQLMLEAGEL------DLTRW 711

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
                 G  +  S + + +    G++ +   +  + +     PLP   +       R + 
Sbjct: 712 RTGVDLGDHVGVSGQVVTSK--RGELSVLVDEWTVTAKCL-HPLPDKRKGLTDPETRVRQ 768

Query: 129 RFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRV 186
           R+LDL  +      +  R+ ++ ++R R+   +++E  TP+L T      AR F+     
Sbjct: 769 RYLDLAVNPDSTNMLRLRSTVVRAVRDRLHHADYLEVETPMLQTVHGGANARPFVTHINA 828

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  AP+ Y + L  +G +R F++   FR+E   +   P EF  L+   ++ + 
Sbjct: 829 YDMRMY-LRIAPELYLKRLCVAGVERVFELNRNFRNEGVDATHNP-EFTMLEAYQAYADY 886

Query: 247 DDILNTMENVLRGVFE 262
           D +      +++   E
Sbjct: 887 DTMRTLTRELVQHAAE 902



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 7/95 (7%)

Query: 473  DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRA 528
            D     A ++DL+  G E+ +            +      +                  A
Sbjct: 1010 DPR--LAERWDLIAFGSEVGTAYTELTDPIEQRRRLEGQSLRAASGDVEAMELDEDFLLA 1067

Query: 529  FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             + GMPP GG+  G+DR++M+L GA ++R+  LFP
Sbjct: 1068 LEHGMPPTGGLGLGVDRLLMMLTGA-SIRQTVLFP 1101


>gi|238898063|ref|YP_002923744.1| asparagine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229465822|gb|ACQ67596.1| asparagine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 466

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 124/386 (32%), Gaps = 50/386 (12%)

Query: 16  DVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           D+G  + + GWV   R    GI F+ + D      +    + +       +    +    
Sbjct: 15  DLGHTIIVRGWVRTRRDSKSGISFVALYDGSCFDTLQIVIEDSLENYHDDI----LHLTT 70

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G  +  S   + +     + E+ A  ++++   E+        + +      +   L  R
Sbjct: 71  GCSIEVSGTVVASQGKGQKFEIRANHLKVIGWVEDPETYPMSPKRHSVEYLREVAHLRPR 130

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------ 188
            + +      R  +  ++      + +   +TPI+T S  EGA +    S ++       
Sbjct: 131 TNLIGAVTRIRHHLAQAIHRFFHEKGYFWIATPIITTSDTEGAGEMFRVSTLDLANISKT 190

Query: 189 --------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+   A      Q      A    + +   P FR E+  + R   EF+ +
Sbjct: 191 ADQKIDFSEDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFRAENSHTSRHLAEFWMV 250

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLR 276
           + E++F   +D+    E +L+ VF                             +S++F R
Sbjct: 251 EPEVAFATLEDVALLAEEMLKYVFSAILKEREDDLDFFTERVDKKAKKRLEEFISSDFAR 310

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           I Y +AI           +P+   +   +EH  +     F   + V    +         
Sbjct: 311 IDYTEAIEILRHCNHSFVHPVSWGIDLSSEHERYLAETHFKAPVIVKNYPKDI-----KA 365

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIF 360
              R   D     A     PG+  I 
Sbjct: 366 FYMRLNEDGKTVAAMDVLAPGIGEII 391



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    + + Q  + +G+++      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDNLDQRLTEMGLNR----EDYAWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R+V  + G +NVRE   FP +  
Sbjct: 424 RRYGSVPHAGFGLGFERLVAYVTGVENVREAIAFPRTPK 462


>gi|195580101|ref|XP_002079894.1| GD21774 [Drosophila simulans]
 gi|194191903|gb|EDX05479.1| GD21774 [Drosophila simulans]
          Length = 558

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 68/349 (19%), Positives = 132/349 (37%), Gaps = 23/349 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G ++  S V++ GWVHR+R  G  +IF+ +RD  G  Q V N        A ++ +E  +
Sbjct: 130 GTANRDSRVKVYGWVHRLRRQGKSLIFITLRDGTGFLQCVLNDQLCQTYDALTLSTESSV 189

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  EL+    E++  A           E    ++   R +
Sbjct: 190 VLFGTLKLVPEG----KTAPGGHELNVDYWELIGPAPPGGADAILNEEAQPDVQLDNRHI 245

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R+ +  + R    A  + E + P L  +  EG           + ++
Sbjct: 246 MIRGENTSKVLKMRSVVTQAFRAHYEARGYNEVTPPTLVQTQVEGGSTLFKLKYFGEEAY 305

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  +       F I+  +R E  R+ R   E+  ++ E  F+  D++L+
Sbjct: 306 --LTQSSQLYLETCLP-ALGDVFTISQSYRAEQSRTRRHLAEYSHVEAECPFLTFDELLD 362

Query: 252 TMENVLRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            +E+++  V +                +       F R+ Y+DAI+    +    ++   
Sbjct: 363 RLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRRMNYEDAIKWLKENNV-TKDDGT 421

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
            +   E    +  R  +  ++       +    K     R   D R+ E
Sbjct: 422 FYEFGEDIPEAPERKMTDTINEPIMLCRFPAEIKSFYMQRCKEDQRLTE 470



 Score = 67.4 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R + SE +L+ ++ 
Sbjct: 449 RFPAEIKSFYMQRCKEDQRLTESVDV-------LLPNVGEIVGGSMRIYDSEELLKGYAR 501

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI  +     +         G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 502 EGIDPQP----YYWYTDQRVYGTMPHGGYGLGLERFLCWLLNRYHIREVCLYPR 551


>gi|187933881|ref|YP_001884396.1| asparaginyl-tRNA synthetase [Clostridium botulinum B str. Eklund
           17B]
 gi|226695286|sp|B2TI01|SYN_CLOBB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|187722034|gb|ACD23255.1| asparagine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 464

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 75/446 (16%), Positives = 143/446 (32%), Gaps = 72/446 (16%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             V +SGW+  +R      F++I D       QVV +     F+    +     + + G 
Sbjct: 20  KEVMISGWIRTLRASNAFGFIEINDGSFFKNIQVVFDDKLGNFKEISKLPISSSISVVGT 79

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +++               E+ A++I I  ++     P+  +R   E +R     L  R +
Sbjct: 80  LVATPD-------AKQPFEIQAKEIVIEGMSNSDY-PLQKKRHTFEYLR-SIAHLRPRSN 130

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------- 189
                   R+    ++      + F+   TPI+T S  EGA +    + ++         
Sbjct: 131 AFSATFRVRSVAAFAIHKFFQEQGFVYTHTPIITGSDCEGAGEMFRVTTLDPKAPELTKE 190

Query: 190 -------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+          Q      A  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 191 GDIDYTKDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSNTTRHAAEFWMIEP 250

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RIC 278
           E++F +  D +   E +L+ V +   +       F                      ++ 
Sbjct: 251 EIAFADLQDDMELAEAMLKYVIKYVMDECPEELQFFNSFVDKGLLERLNHVVSSDFAKVT 310

Query: 279 YDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
           Y +A+        +    +   +   TEH  +     F K L V    +           
Sbjct: 311 YTEAVEILEKCDKEFDYDVSWGIDLQTEHERYLTEEHFKKPLFVTDYPKEI--------- 361

Query: 337 NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
            +AF  RMNE  ++     L          G    +G   +   +   EA    L ++  
Sbjct: 362 -KAFYMRMNEDNKTVAATDLLV-------PGIGEIIGGSQREERLDVLEARMAELGLKKE 413

Query: 397 DSCFFI----AGDPLKFCSFAADARN 418
           D  +++     G+           R 
Sbjct: 414 DYWWYLELRKYGETKHAGFGLGFERL 439



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 55/146 (37%), Gaps = 26/146 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P     +E K        F M           D  ++ A  
Sbjct: 339 HERYLTEEHFKKPLFVTDYP-----KEIK-------AFYMRMNE-------DNKTVAAT- 378

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  EI  G  R    +V+    + +G+ K      +       + G   H G  
Sbjct: 379 -DLLVPGIGEIIGGSQREERLDVLEARMAELGLKK----EDYWWYLELRKYGETKHAGFG 433

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G +R++M + G  N+R+V  FP + 
Sbjct: 434 LGFERLIMYITGMTNIRDVIPFPRTP 459


>gi|15610734|ref|NP_218115.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15843211|ref|NP_338248.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31794775|ref|NP_857268.1| lysyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121639518|ref|YP_979742.1| lysyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148663463|ref|YP_001284986.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148824804|ref|YP_001289558.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167968199|ref|ZP_02550476.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215432573|ref|ZP_03430492.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|219559674|ref|ZP_03538750.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224992015|ref|YP_002646704.1| lysyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800639|ref|YP_003033640.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis KZN 1435]
 gi|254366156|ref|ZP_04982200.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|260202790|ref|ZP_05770281.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289555861|ref|ZP_06445071.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis KZN 605]
 gi|289571838|ref|ZP_06452065.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis T17]
 gi|289572253|ref|ZP_06452480.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis K85]
 gi|289755726|ref|ZP_06515104.1| lysyl-tRNA synthetase 1 [Mycobacterium tuberculosis EAS054]
 gi|297636274|ref|ZP_06954054.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297733268|ref|ZP_06962386.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|306777954|ref|ZP_07416291.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu001]
 gi|306778485|ref|ZP_07416822.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu002]
 gi|306786506|ref|ZP_07424828.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu003]
 gi|306790872|ref|ZP_07429194.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu004]
 gi|306791195|ref|ZP_07429497.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu005]
 gi|306795980|ref|ZP_07434282.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu006]
 gi|306801226|ref|ZP_07437894.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu008]
 gi|306805440|ref|ZP_07442108.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu007]
 gi|306969731|ref|ZP_07482392.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu009]
 gi|306974072|ref|ZP_07486733.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu010]
 gi|307081780|ref|ZP_07490950.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu011]
 gi|307086396|ref|ZP_07495509.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu012]
 gi|313660598|ref|ZP_07817478.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|54039679|sp|P67608|SYK1_MYCBO RecName: Full=Lysyl-tRNA synthetase 1; AltName: Full=Lysine--tRNA
           ligase 1; Short=LysRS 1
 gi|54042300|sp|P67607|SYK1_MYCTU RecName: Full=Lysyl-tRNA synthetase 1; AltName: Full=Lysine--tRNA
           ligase 1; Short=LysRS 1
 gi|254782475|sp|A1KPT4|SYK_MYCBP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|254782476|sp|C1AI57|SYK_MYCBT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|254782478|sp|A5U8S4|SYK_MYCTA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|2113978|emb|CAB08946.1| LYSYL-TRNA SYNTHETASE 1 LYSS (LYSINE--TRNA LIGASE 1) (LYSRS 1)
           (LYSINE TRANSLASE) [Mycobacterium tuberculosis H37Rv]
 gi|13883565|gb|AAK48062.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31620372|emb|CAD95815.1| LYSYL-TRNA SYNTHETASE 1 LYSS (LYSINE--TRNA LIGASE 1) (LYSRS 1)
           (LYSINE TRANSLASE) [Mycobacterium bovis AF2122/97]
 gi|121495166|emb|CAL73652.1| Lysyl-tRNA synthetase 1 lysS [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|134151668|gb|EBA43713.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148507615|gb|ABQ75424.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148723331|gb|ABR07956.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis F11]
 gi|224775130|dbj|BAH27936.1| lysyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253322142|gb|ACT26745.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis KZN 1435]
 gi|289440493|gb|EFD22986.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis KZN 605]
 gi|289536684|gb|EFD41262.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis K85]
 gi|289545592|gb|EFD49240.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis T17]
 gi|289696313|gb|EFD63742.1| lysyl-tRNA synthetase 1 [Mycobacterium tuberculosis EAS054]
 gi|308213726|gb|EFO73125.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu001]
 gi|308328479|gb|EFP17330.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu002]
 gi|308328893|gb|EFP17744.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu003]
 gi|308332731|gb|EFP21582.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu004]
 gi|308340224|gb|EFP29075.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu005]
 gi|308343546|gb|EFP32397.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu006]
 gi|308348013|gb|EFP36864.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu007]
 gi|308351954|gb|EFP40805.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu008]
 gi|308352740|gb|EFP41591.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu009]
 gi|308356589|gb|EFP45440.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu010]
 gi|308360546|gb|EFP49397.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu011]
 gi|308364162|gb|EFP53013.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu012]
 gi|323717707|gb|EGB26907.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis CDC1551A]
 gi|328460370|gb|AEB05793.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis KZN 4207]
          Length = 505

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 60/270 (22%), Positives = 110/270 (40%), Gaps = 20/270 (7%)

Query: 5   RTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPD 55
           RTH+  ++  +             V ++G V   R  G + F  ++D  G   QV+ + D
Sbjct: 38  RTHTLAEVRAAHPDLPIDTATEDIVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLD 97

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                   + +++  L   G ++      I++    G++ + A    I   A+ L     
Sbjct: 98  KVGQAALDAWKADVDL---GDIVYVHGAVISSR--RGELSVLADCWRI--AAKSLRPLPV 150

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL  R         R  ++ ++R  +    F+E  TP+L   + 
Sbjct: 151 AHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVLQTLAG 210

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F   S       Y L  AP+ + +  +  GFD+ F++   FR+E   S   P E
Sbjct: 211 GAAARPFATHSNALDIDLY-LRIAPELFLKRCIVGGFDKVFELNRVFRNEGADSTHSP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++   DD       +++ V +E
Sbjct: 269 FSMLETYQTYGTYDDSAVVTRELIQEVADE 298



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 26/135 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ DFP                P T     +              ++DL   G E+A
Sbjct: 386 APTFVKDFP------------VQTTPLTRQHRSIP---------GVTEKWDLYLRGIELA 424

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G        V  + F++   +    ++           A + GMPP  G   GIDR++M
Sbjct: 425 TGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLM 484

Query: 549 LLLGAKNVREVSLFP 563
            L G  ++RE  LFP
Sbjct: 485 SLTGL-SIRETVLFP 498


>gi|68487991|ref|XP_712154.1| hypothetical protein CaO19.6702 [Candida albicans SC5314]
 gi|68488042|ref|XP_712129.1| hypothetical protein CaO19.13994 [Candida albicans SC5314]
 gi|77023058|ref|XP_888973.1| hypothetical protein CaO19_6702 [Candida albicans SC5314]
 gi|46433497|gb|EAK92935.1| hypothetical protein CaO19.13994 [Candida albicans SC5314]
 gi|46433524|gb|EAK92961.1| hypothetical protein CaO19.6702 [Candida albicans SC5314]
 gi|76573786|dbj|BAE44870.1| hypothetical protein [Candida albicans]
          Length = 552

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 61/313 (19%), Positives = 115/313 (36%), Gaps = 29/313 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
              + + V + GWVHR+R   G+ F+ +RD  G  Q V   D A  +  + +  E  + I
Sbjct: 123 KDHLDTRVLVQGWVHRLRVQKGLAFITLRDGTGYLQCVLTGDLAKAKQTQELTIESTVAI 182

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFL 131
            G++              G +EL A   +I+++A   +       +     ++    R L
Sbjct: 183 KGVISKLPEG----KTAPGGVELKADHYQIIALAPGGDESFTNKVQENADPNLLLDQRHL 238

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR ++L   +  R     ++R     E   E + P +  +  EG           + ++
Sbjct: 239 ALRGESLSAVMKVRAAYSAAIRRFFTEEGLTEVTPPCMVQNQVEGGSTLFKLDYYGEEAY 298

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  +AS     + I   FR E   + R   E+  ++ E+ F+  +D+L 
Sbjct: 299 --LTQSSQLYLETCLAS-LGDVYCIQESFRAEKSHTRRHLSEYTHIEAELVFITFEDLLT 355

Query: 252 TMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRY------GTDKP 291
            +E +L    +                 +       F R+ Y +A+           D  
Sbjct: 356 HLEKLLSKTIQYVLEDPVAGPIVKQLNPDFKAPKAPFKRMEYIEALDWLNEHGIPNEDGE 415

Query: 292 DLRNPIIMHNVTE 304
             +    +    E
Sbjct: 416 KFKFGDDIAEAAE 428



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R    + ++ A   
Sbjct: 443 RFPAEIKSFYMQRCKDDPRVTESVDV-------LMPNVGEITGGSMRIDNYDELMAALKR 495

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             ++     + +       + G  PHGG   G++R +  +L    VR+ SL+P     C 
Sbjct: 496 ENLNL----DSYYWFTDVRKYGSAPHGGYGIGLERQLAYMLNRYTVRDCSLYPRFTGRCK 551

Query: 571 L 571
            
Sbjct: 552 P 552


>gi|215405648|ref|ZP_03417829.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215413522|ref|ZP_03422194.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|289747435|ref|ZP_06506813.1| lysyl-tRNA synthetase 1 lyss [Mycobacterium tuberculosis 02_1987]
 gi|294993718|ref|ZP_06799409.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|298527077|ref|ZP_07014486.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis 94_M4241A]
 gi|289687963|gb|EFD55451.1| lysyl-tRNA synthetase 1 lyss [Mycobacterium tuberculosis 02_1987]
 gi|298496871|gb|EFI32165.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis 94_M4241A]
 gi|326905437|gb|EGE52370.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis W-148]
          Length = 505

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 60/270 (22%), Positives = 110/270 (40%), Gaps = 20/270 (7%)

Query: 5   RTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPD 55
           RTH+  ++  +             V ++G V   R  G + F  ++D  G   QV+ + D
Sbjct: 38  RTHTLAEVRAAHPDLPIDTATEDIVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLD 97

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                   + +++  L   G ++      I++    G++ + A    I   A+ L     
Sbjct: 98  KVGQAALDAWKADVDL---GDIVYVHGAVISSR--RGELSVLADCWRI--AAKSLRPLPV 150

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL  R         R  ++ ++R  +    F+E  TP+L   + 
Sbjct: 151 AHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVLQTLAG 210

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F   S       Y L  AP+ + +  +  GFD+ F++   FR+E   S   P E
Sbjct: 211 GAAARPFATHSNALDIDLY-LRIAPELFLKRCIVGGFDKVFELNRVFRNEGADSTHSP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++   DD       +++ V +E
Sbjct: 269 FSMLETYQTYGTYDDSAVVTRELIQEVADE 298



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 26/135 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ DFP                P T     +              ++DL   G E+A
Sbjct: 386 APTFVKDFP------------VQTTPLTRQHRSIP---------GVTEKWDLYLRGIELA 424

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G        V  + F++   +    ++           A + GMPP  G   GIDR++M
Sbjct: 425 TGYSELSDPVVQRERFADQARAAAAGDDETMVLDEDFLAALEYGMPPCTGTGMGIDRLLM 484

Query: 549 LLLGAKNVREVSLFP 563
            L G  ++RE  LFP
Sbjct: 485 SLTGL-SIRETVLFP 498


>gi|315222919|ref|ZP_07864798.1| asparaginyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315187869|gb|EFU21605.1| asparaginyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 440

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 110/310 (35%), Gaps = 24/310 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
            + VG  V +  WV      G I FL +RD       V   P+             F I 
Sbjct: 4   KNHVGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFLEKFGEEEGLNKFNII 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + + G+V                 EL    IEI+  + + P+     +E+  
Sbjct: 64  KHLNQETAVLVKGIVKEDERSKF-------GYELDVTDIEIVGESNDYPITP---KEHGT 113

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                +R L LR       +  R  II +         FI+  +PIL+ ++ E + +   
Sbjct: 114 DFLMDHRHLWLRSRKQMAIMQIRNAIIYASYEFFDRNGFIKFDSPILSGNAAEDSTELFE 173

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E  
Sbjct: 174 TDYFGTPAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYP 230

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           FV  D+ LN  E  ++ + +   +    +   L    +   +        +    ++  +
Sbjct: 231 FVTHDESLNLQEAYVKALIQGVLDRAPHALEVLERDIELLKKYVAEPFKRISYDEVIDLL 290

Query: 303 TEHFVHSEFR 312
            EH    +  
Sbjct: 291 QEHENDEDAE 300



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 316 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNEERVLCADLLAPEGYG-------- 362

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E +L      G++     + +       + G  PH G   G++R+V  
Sbjct: 363 EIIGGSAREESYEKLLAKIEENGLN----SDDYAFYLDLRKYGSVPHAGFGLGLERMVTF 418

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +  + 
Sbjct: 419 VAGTKHIREAIPFPRMLHRIEP 440


>gi|157129543|ref|XP_001661717.1| aspartyl-tRNA synthetase [Aedes aegypti]
 gi|108872172|gb|EAT36397.1| aspartyl-tRNA synthetase [Aedes aegypti]
          Length = 534

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 80/381 (20%), Positives = 137/381 (35%), Gaps = 49/381 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-----NPDSACFEIAKSV 65
           DL      + V + G VH  R  G   FL +R      Q V             + + S+
Sbjct: 81  DLSTCSKDALVWVRGRVHTSRAKGKQCFLVLRQQSSTVQCVLAVNDSTVSKQMVKFSGSI 140

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--------------EELP 111
             E ++ I   V+   ++    +     +EL   +I ++S A              E+  
Sbjct: 141 PRESIIDIKAKVVQVESKI--ESCTEQNLELHVVEIFLVSAAKAQLPLQIEDAARPEKSD 198

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
            P   +    +  R   R LDLR             +    R  +  + F E  TP + +
Sbjct: 199 DPEALKIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDILSNKGFTEIHTPKIIS 258

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           ++ EG  +    S   + ++ A  Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R  
Sbjct: 259 AASEGGANVFTVSYFKESAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHL 316

Query: 232 GEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSN------------GNTVSNNFLR-- 276
            EF  LD+EM+F     ++L+T+ N    +F+   +             N     FL   
Sbjct: 317 TEFVGLDLEMAFKYHYHEVLDTIGNTFTEIFKGLRDSYAREIAAVGQQYNVEPFKFLEPP 376

Query: 277 --------ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYE 325
                   +           D+ DL  P    +  + +    ++F +  K  L+V P Y 
Sbjct: 377 LKLEYAQAVTMLREAGVTMDDEEDLSTPSEKLLGRLVKAKYDTDFYILDKFPLAVRPFYT 436

Query: 326 VWAIPAKGGGGNRAFCDRMNE 346
           +          +     R  E
Sbjct: 437 MPDPHNPKYSNSYDMFMRGEE 457



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                   +  YD+   G EI SG  R H  E +++   +
Sbjct: 426 KFPLAVRPFYTMPD--------PHNPKYSNSYDMFMRGEEILSGAQRIHDPEYLVERAKH 477

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I      ++      AF+ G PPH G   G++R+VML LG  N+R+ S+FP       
Sbjct: 478 HAIDI----SKIAAYIEAFRFGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLT 533

Query: 571 L 571
            
Sbjct: 534 P 534


>gi|326914570|ref|XP_003203598.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           [Meleagris gallopavo]
          Length = 477

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 103/262 (39%), Gaps = 18/262 (6%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L   +    V++ GWV  VR    ++FL + D   +  +    D +     + +     +
Sbjct: 35  LRSREAAGKVKVQGWVRSVRSQKEVLFLHVNDGSSLESLQVVADPSLE--CRDLTFGSAV 92

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G ++    +          +EL A+ I ++   + L  P   +  +P     ++  L
Sbjct: 93  EVQGKLVKSPHKM-------QDVELQAEAIHVVGPCDTLSFPFKIKERHPLEYVRQFPHL 145

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-----RV 186
             R + L   +  R+    ++        ++   TPI+T++  EGA +    S       
Sbjct: 146 RCRSNALGALLRIRSEATAAIHSFFQDNGYVHIHTPIITSNDCEGAGELFQTSQEAKESA 205

Query: 187 NQGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            +  F+ +P       Q     MA  F   F   P FR E+ +S R   EFY ++ E+SF
Sbjct: 206 EKNHFFNVPTFLTVSGQLHLEAMAGAFTHVFTFGPTFRAENSQSRRHLAEFYMVEAELSF 265

Query: 244 VEQ-DDILNTMENVLRGVFEEF 264
            E   DI+  ME++ +      
Sbjct: 266 TESLQDIMQVMEHLFKTATSTV 287



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 63/193 (32%), Gaps = 34/193 (17%)

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K + I   EA+ +        +       P   C    +   ++ +  G +        +
Sbjct: 317 KFVTISYNEAVEILKQASQTFTF-----KPEWGCDLQTEHEKYLVKHCGEV------PVF 365

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           ++++P           D    PF M                 A    LV    E+  G +
Sbjct: 366 VINYP----------YDL--KPFYMRDNED------GPQRTVAAVDLLVPEIGELCGGSL 407

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R      +      +G++     + +       + G  PHGG   G +R +  +LG  N+
Sbjct: 408 REERLPFLESRLQRLGLT-----DSYQWYLDLRKFGSVPHGGFGMGFERYLQYILGVDNI 462

Query: 557 REVSLFPMSQNFC 569
           ++V  FP   + C
Sbjct: 463 KDVIPFPRFPHSC 475


>gi|255087702|ref|XP_002505774.1| predicted protein [Micromonas sp. RCC299]
 gi|226521044|gb|ACO67032.1| predicted protein [Micromonas sp. RCC299]
          Length = 667

 Score =  173 bits (439), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 52/267 (19%), Positives = 113/267 (42%), Gaps = 15/267 (5%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           G++    V   V ++G +   R  G  ++F D+R      QV+A+  +A           
Sbjct: 115 GEVKTDVV---VSVAGRLMSKRASGTKLMFYDLRGDGVKIQVMADAKNATEY---DFEKC 168

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
                 G ++             G++ +    +E+L+    +     G ++  +  R++ 
Sbjct: 169 HASTRRGDIVGIRG--HPGKSKKGELSIFPCHMEVLTPCLHMLPGFSGLKD--QETRYRK 224

Query: 129 RFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R+LDL  +   +   + R+ +I S+R  +  ++F+E  TP++        A+ F+     
Sbjct: 225 RYLDLIMNPEVRDIFITRSNVIRSIRKYLDDKDFVEVETPMMNMIPGGATAKPFITHHND 284

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
              + Y +  AP+ Y + L+  G DR ++I   FR+E       P EF   +  M++ + 
Sbjct: 285 LDMTLY-MRIAPELYLKELVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYMAYADY 342

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNN 273
           +D++   E ++ G+  +      +  +
Sbjct: 343 EDLMKMTEELISGMVLKLKGSYKIQYH 369



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 8/114 (7%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +P  M           D       +++L  N  E+ +     +   V  + F++    K 
Sbjct: 458 HPKIMSPLAKYHRSLPD----MTERFELFVNKREVCNAYTELNDPIVQRERFADQAKQKA 513

Query: 517 VVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             ++           + + G+PP GG   G+DR+ M+L    N++EV LFP  +
Sbjct: 514 AGDDEAMFVDETFCESLEYGLPPTGGWGIGVDRLTMMLTDTANIKEVLLFPAMK 567


>gi|223933851|ref|ZP_03625817.1| Asparagine--tRNA ligase [Streptococcus suis 89/1591]
 gi|223897469|gb|EEF63864.1| Asparagine--tRNA ligase [Streptococcus suis 89/1591]
          Length = 353

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 63/305 (20%), Positives = 112/305 (36%), Gaps = 24/305 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-----------NPDSACFEIAKSV 65
           VG  V +  WV      G + FL +RD     Q VA              +  F++AK +
Sbjct: 15  VGQEVTIGAWVANKSGKGKLAFLQLRDGTAFFQAVALKPNFIEKFGEEAGTEKFDVAKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  +++ P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKF-------GYELDVTDLEVIGESQDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR          R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q ++  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E SF+ 
Sbjct: 185 FGQPAY--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLS 241

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            ++ L+  E  ++ + +   +    +   L    D   R        +     +  + EH
Sbjct: 242 HEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRYIAEPFKRVAYDDAITLLQEH 301

Query: 306 FVHSE 310
               +
Sbjct: 302 EADED 306


>gi|17136276|ref|NP_476609.1| Aspartyl-tRNA synthetase [Drosophila melanogaster]
 gi|7303387|gb|AAF58445.1| Aspartyl-tRNA synthetase [Drosophila melanogaster]
 gi|17944217|gb|AAL48003.1| GM14334p [Drosophila melanogaster]
 gi|220944800|gb|ACL84943.1| Aats-asp-PA [synthetic construct]
 gi|220954640|gb|ACL89863.1| Aats-asp-PA [synthetic construct]
          Length = 531

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 64/272 (23%), Positives = 111/272 (40%), Gaps = 24/272 (8%)

Query: 17  VGS-FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEIAKSVRSEWVL 71
           VG   V + G VH  R  G   FL +R      Q +            + A ++  E ++
Sbjct: 84  VGKGLVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGDVISKQMVKFAGNIPKESII 143

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--------- 122
            I    ++ S++    +     +ELS ++I ++S A+        +   PE         
Sbjct: 144 DIQAKPVAVSSKI--ESCTEQSLELSVEQIFVISQAKAQLPLQIEDASRPENADDAEGLN 201

Query: 123 -----SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                  R   R LDLR             +    R  +  + F E  TP + +++ EG 
Sbjct: 202 IRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAASEGG 261

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +    S     ++ A  Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF  L
Sbjct: 262 ANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGL 319

Query: 238 DMEMSFV-EQDDILNTMENVLRGVFEEFSNGN 268
           D+EM+F     ++L+T+ N    +F+   +  
Sbjct: 320 DLEMAFKYHYHEVLHTIGNTFTSIFKGLRDKY 351



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                 + +  YD+   G EI SG  R H  E +++   +
Sbjct: 423 KFPLAIRPFYTMPD--------PNNPVYSNSYDMFMRGEEILSGAQRIHDPEYLIERAKH 474

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI      ++      +F+ G PPH G   G++R+VML LG  N+R+ S+FP       
Sbjct: 475 HGIDT----SKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLT 530

Query: 571 L 571
            
Sbjct: 531 P 531


>gi|226362961|ref|YP_002780743.1| lysyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|296439701|sp|C1B7Z5|LYSX_RHOOB RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|226241450|dbj|BAH51798.1| putative lysyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 1114

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 113/255 (44%), Gaps = 10/255 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+  +   S  G+ VR++G + R+R +GG++F  +RD  G  QV+ +      +  ++ 
Sbjct: 659 SHTVTEAVESPEGTTVRIAGRLLRIRDYGGVVFAVVRDWSGDIQVLVDEARVGTDRIRAF 718

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +E+ L   G ++  +     +    G + L A +  +       PLP   +       R
Sbjct: 719 AAEFDL---GDLVEVAGVIGYSR--RGALSLLANEWRMTGKCL-HPLPDKWKGLSDPETR 772

Query: 126 FKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
            + R++DL  +T   + +  R+ ++ S+R  +    F+E  TPIL        A  FL  
Sbjct: 773 VRQRYVDLAINTDARRLLEARSAVVKSLRDSLGGRGFLEVETPILQQVHGGANAAPFLTH 832

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L  +G ++ F+I   FR+E       P EF  L+   + 
Sbjct: 833 INAYNLDLY-LRIAPELYLKRLCVAGMEKVFEIGRVFRNEGVDFKHNP-EFTILEAYEAH 890

Query: 244 VEQDDILNTMENVLR 258
            + + ++     +++
Sbjct: 891 SDYEKMMVLCRELIQ 905



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 59/168 (35%), Gaps = 28/168 (16%)

Query: 406  PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
            P +    A      + + L       +      +FP +  N        + +P T P   
Sbjct: 971  PYQSTWDAGAVAQEMYEHL----VEDY-----TEFPTFYTN-----FPTSMSPLTRPHPT 1016

Query: 466  MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENR 521
            +            A ++DLV  G E+ +               +   +      E     
Sbjct: 1017 IP---------GVAAKWDLVAWGVELGTAYSELTDPVDQRNRLTEQSMLAAGGDEEAMEL 1067

Query: 522  FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                 +A +  MPP GG+  G+DR+VML+ G  ++RE   FP+++   
Sbjct: 1068 DEDFLQALEHAMPPTGGLGMGVDRVVMLITG-GSIRETLAFPLAKPRQ 1114


>gi|320547173|ref|ZP_08041467.1| asparagine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320448160|gb|EFW88909.1| asparagine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 448

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 64/308 (20%), Positives = 112/308 (36%), Gaps = 24/308 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
            + VG  V +  WV      G I FL +RD       V   P+          +  F   
Sbjct: 12  KNHVGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKYGEEEGTEKFNTI 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + I G+V   S             EL    ++I+  +E+ P+     +E+  
Sbjct: 72  KHLSQETSILITGIVKEDSRSKF-------GYELDVTDLKIVGHSEDYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                +R L LR       +  R  II +         FI+  +PIL+ ++ E + +   
Sbjct: 122 DFLMDHRHLWLRSRKQMAIMQIRNAIIYATYDFFDKNGFIKFDSPILSGNAAEDSTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                 G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S
Sbjct: 182 TDYF--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++ L+  E  ++ + +   +    +   L    D   +        +     +  +
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAIDLL 298

Query: 303 TEHFVHSE 310
            EH    +
Sbjct: 299 QEHENDED 306



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVIN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ K   E          + G  PH G   GI+R+V  
Sbjct: 371 EIIGGSVREDDYDTLVAKMDALGMDKSEYE----FYLDLRKYGSVPHAGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|269128677|ref|YP_003302047.1| lysyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268313635|gb|ACZ00010.1| lysyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 499

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 61/294 (20%), Positives = 113/294 (38%), Gaps = 28/294 (9%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RT +  ++          ++ G  V ++G V  +R  G + F  IRD  G  QV+ +   
Sbjct: 40  RTATLAEVRERYPDLEPGTETGDKVGVAGRVMLLRNTGKLCFATIRDGTGQIQVMLSQAR 99

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E   S + +  L   G  +    E + +    G++ + A +  I S     PLP   
Sbjct: 100 VGEEALASWKRDVDL---GDHIGVEGEVVTSR--RGELSVMADRYAITSKCLR-PLPEKH 153

Query: 117 EREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
                   R + R++DL  +    +    R+  + ++R     E ++E  TP+L      
Sbjct: 154 AGLTDPEARVRLRYVDLIVNDEARRMAYLRSDTVRAVRDFWHEEGYLEVETPMLQPIHGG 213

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+          Y L  A + Y + L+  G D+ F+I   FR+E   S   P EF
Sbjct: 214 AAARPFVTHINAYDMDLY-LRIAIELYLKRLVVGGIDKVFEINRNFRNEGADSTHNP-EF 271

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG----------NTVSNNFLRIC 278
             L+   ++++ +D+    + + +   +               +     + RI 
Sbjct: 272 TMLEAYGTYLDYNDMAVLTQRMYQRAVQAALGTTVVVHKGQEVDLGLEEWPRIT 325



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 67/205 (32%), Gaps = 32/205 (15%)

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           L+E   +   G V++ L    T    +    +  D+                     + +
Sbjct: 318 LEEWPRITLYGSVSEALGEEITPHTPLEQVRKLADARQIAWDPK----WGQGRLVQELFE 373

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL  +     +  ++MD+P      E   +   H                    +   ++
Sbjct: 374 EL--VEHTLIQPTFVMDYPL-----ETSPLTRQHR----------------SEPLLTEKW 410

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGG 538
           DL+  G E+ +            +  +   +                 RA + GMPP GG
Sbjct: 411 DLIGFGTELGTAYSELIDPIEQRRRLTEQSLLAAGGDPEAMQLDEDFLRALEYGMPPTGG 470

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  GIDR++M   G K +RE  LFP
Sbjct: 471 VGVGIDRMIMAFTG-KGIRETILFP 494


>gi|208434136|ref|YP_002265802.1| lysyl-tRNA synthetase [Helicobacter pylori G27]
 gi|226710889|sp|B5Z9V6|SYK_HELPG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|208432065|gb|ACI26936.1| lysyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 501

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 12/261 (4%)

Query: 8   SCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
              DL    D      + G V  +R  G   F+ I D   I Q   + +    E  KS++
Sbjct: 44  YVKDLEEPKDKEKCESIVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDE-FKSLK 102

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L +  +V+    +       TG++ + A +  ILS    +PLP          +R+
Sbjct: 103 KH--LEVGDIVL---VKGFPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRY 156

Query: 127 KYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+LDL  +  +     KR+ I++S+R     E F+E  TP++        AR F+   
Sbjct: 157 RQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYH 216

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              +   Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++ 
Sbjct: 217 NALEVERY-LRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYH 274

Query: 245 EQDDILNTMENVLRGVFEEFS 265
             +D++   + +   + +  +
Sbjct: 275 TYEDLIELSKRLFDYLLKTLN 295



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL GAK++++V LFP
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|323466412|gb|ADX70099.1| asparaginyl-tRNA synthetase-like protein 2 (putative)
           [Lactobacillus helveticus H10]
          Length = 448

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 74/323 (22%), Positives = 122/323 (37%), Gaps = 34/323 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      FE+AKS+R E 
Sbjct: 26  SSKHVDQEVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVTDEVFEVAKSLRQES 85

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G V   +             E+    ++++S  E       G +E+       +R
Sbjct: 86  SFYITGTVHEDARSHF-------GYEIQITDLKVVSNNE---GYPIGNKEHGIDFLLDHR 135

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +  +       E+FI+   PI   S+PEG          +  
Sbjct: 136 HLWLRSKKPFAIMQIRNTMFKATVDFFEKEDFIKFDAPIFMHSAPEGTTQLFHVDYFDHD 195

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  F + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 196 AY--LSQSGQLY-GEAGAMAFGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 252

Query: 250 LNTMENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDL 293
           L+  E  L  + ++  + N                    NF+R+ YDDA++       D 
Sbjct: 253 LDLQERYLAYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFVRLPYDDAVKMLQDAGRDF 312

Query: 294 RNPIIMH--NVTEHFVHSEFRVF 314
           +        +        +  VF
Sbjct: 313 KWGDDFGAPDEGYISEQYDRPVF 335



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 28/175 (16%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEE 449
           +G+       D +K    A         + G  +            +I+++P        
Sbjct: 290 EGNFVRLPYDDAVKMLQDAGR-DFKWGDDFGAPDEGYISEQYDRPVFIVNYP-------- 340

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                +  PF M +      +      I    Y       EI  G  R    EV+ Q   
Sbjct: 341 ----TSIKPFYMKKNPDNPKEYLCADVIAPEGY------GEIFGGSEREGNYEVLKQQII 390

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + G++ E  +          + G  PH G   G +R +  +    ++RE   FP 
Sbjct: 391 DAGLNLEDYQ----WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPR 441


>gi|229815844|ref|ZP_04446168.1| hypothetical protein COLINT_02897 [Collinsella intestinalis DSM
           13280]
 gi|229808539|gb|EEP44317.1| hypothetical protein COLINT_02897 [Collinsella intestinalis DSM
           13280]
          Length = 661

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 53/271 (19%), Positives = 108/271 (39%), Gaps = 17/271 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCIDG 75
             V + G V   R  G I+F+ +RD     Q+     + +   +E+ K +    ++   G
Sbjct: 64  ETVTIGGRVVAKRGQGKIMFIVVRDPSADIQLFCRVNDVEEESWEVLKELDLGDIVQATG 123

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            +              G++ ++ +  ++LS A   PLP        +  R++ R++DL  
Sbjct: 124 QMTRTKR---------GELSIAPRTAQLLSKAVR-PLPEKFHGLSDKETRYRQRYVDLIV 173

Query: 136 DT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYA 193
           +  + +   KR+ I+++ R  M    ++E  TPIL +      A+ F+          Y 
Sbjct: 174 NEDVRETFRKRSAIVSAFRRYMEDNGYMEVETPILQSIQGGATAKPFITHFNALNQENY- 232

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  A + + + L+  G++R F+I   FR+E       P EF  ++   ++ + + +    
Sbjct: 233 LRIATELHLKRLLVGGYERVFEIGRIFRNEGMDLTHNP-EFTTMEAYRAYSDLEGMKELA 291

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           E V++           +      I       
Sbjct: 292 EGVIKAAARAIGLEGMIDYQGQAIDLFSPWP 322



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 56/160 (35%), Gaps = 27/160 (16%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             A      +  ELG          +++D+P               +P          L 
Sbjct: 362 WTAGKLIAELFDELG--EAILINPTFVVDYP------------VEVSPLAKRHEDDPRL- 406

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLY 526
                     +++L     E A+     +      + F+     K    +          
Sbjct: 407 --------THRFELFIAAHEYANAFSELNDPVDQAERFAAQMEEKAGGDDEAMEYDEDYV 458

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           RA + GMPP GGI  GIDR+VMLL  + ++R+V LFP  +
Sbjct: 459 RALEYGMPPAGGIGIGIDRVVMLLTNSTSIRDVLLFPHMK 498


>gi|322694644|gb|EFY86468.1| lysyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 567

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 98/569 (17%), Positives = 186/569 (32%), Gaps = 118/569 (20%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G +D    ++L+G ++  R  G  + F DIR      QV+A  D+   + A S   + V 
Sbjct: 100 GETDKSRMIQLAGRIYVRRSAGSKLFFYDIRSDGTRLQVLAQADN-LDDKAPSFDEQHVN 158

Query: 72  CIDGLVMSRSAETINANIIT--------GQIELSAQKIEILSVAEELPLPVFGEREYPES 123
              G ++         N  T        G++ ++A +I +LS             + PE 
Sbjct: 159 LRRGDIIGIRGFPTRTNPKTKQGSGEYSGELSIAAVEITLLSPCLHQIPDDHYGFKNPE- 217

Query: 124 IRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFL 181
            RF+ R+LDL  +   +   + R ++ + +R      +F+   TP+L   +    AR F+
Sbjct: 218 TRFRQRYLDLMMNEKSRQIFITRAKVDSYIRRWFDERDFVSVQTPMLNPIAGGATARPFI 277

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     + L  AP+ Y ++L+  G +R +++   FR+E                  
Sbjct: 278 THHNDLNMDMF-LRVAPELYLKMLVVGGLNRVYEMGRQFRNES----------------- 319

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
                   ++   N                                 +   L   +   +
Sbjct: 320 --------MDLTHN--------------------------------PEFTTLEFYMAYAD 339

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           V +    +E  V   +  ++  Y+      KG   N  +      W R +  P L     
Sbjct: 340 VYDLMTMTEELVSGLVKHIHGSYKTVYHTIKGEEININWE---GPWRRIEMIPAL----- 391

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
                  V    P A  L+         ++  + G     +   P    +   DA   + 
Sbjct: 392 ----EEAVGEKFPPADTLHTEEANQFFKKVLAKTG-----VECSPPLTNARMLDA--LVG 440

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + L           +I+                  +P  M        K +        +
Sbjct: 441 EYL---ESQAINPTFII-----------------GHPKMMSPLA----KDSRTTPGLCER 476

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHG 537
           +++  +  EI +     +++      F      K   ++          +A +  +PP G
Sbjct: 477 FEVFVSTKEIVNAYTELNVAAEQRLRFEEQARQKSQGDDEAQMADETFCQALEHALPPTG 536

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G   GIDR++M L    ++REV  FP  +
Sbjct: 537 GWGMGIDRMMMFLTDNYSIREVLAFPTMK 565


>gi|255284236|ref|ZP_05348791.1| asparagine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255265189|gb|EET58394.1| asparagine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 463

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 52/353 (14%), Positives = 109/353 (30%), Gaps = 51/353 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
             + +   + + GWV  VR      FL + D       Q+V +     F+    +     
Sbjct: 13  REAYLDKEITVGGWVRSVRDSKTFGFLVLHDGTFFETLQIVFHDKMDNFQEICKLNVGAA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +++               E+ A ++ +   +         ++ +          
Sbjct: 73  VIVKGTLVATPQ-------AKQPFEIQADEVTVEGGSAPDYPLQ--KKRHSVEFLRTISH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++       +F+   TP++T S  EGA +    + ++   
Sbjct: 124 LRPRTNMFQATFRVRSLTAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDLEN 183

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q    + A  F   +   P FR E+  + R   E
Sbjct: 184 PPKTADGKVDYTKDFFGKQTNLTVSGQLNGEMYAQAFRNIYTFGPTFRAENSNTTRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +  D +   E++L+ V             F                   
Sbjct: 244 FWMIEPEIAFADLKDDMILAEDMLKYVIRYVMENAPEELAFFNSFVDKGLMERLNSVVNS 303

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
               + Y +AI     +       +       TEH  +   +VF + + V   
Sbjct: 304 QFGHVTYTEAIEILEKNNDKFEYKVSWGCDLQTEHERYLTEQVFKRPVFVTDY 356



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 48/133 (36%), Gaps = 24/133 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K        F M        K ND     A    LV    EI 
Sbjct: 349 RPVFVTDYP-----KEIK-------AFYM--------KLNDDGKTVAAMDCLVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    E +LQ    +G+     E  +       + G   H G   G +R VM L G
Sbjct: 389 GGSQREDSYEKLLQRMHELGLK----EEDYRAYLDLRKYGSTRHAGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMS 565
             N+R+V  FP +
Sbjct: 445 VSNIRDVIPFPRT 457


>gi|317009859|gb|ADU80439.1| lysyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 501

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 122/297 (41%), Gaps = 20/297 (6%)

Query: 8   SCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
              DL    +      + G V  +R  G   F+ I D   I Q   + +    E  KS++
Sbjct: 44  YVKDLEEPKNKEKCESVVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDE-FKSLK 102

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L +  +V+    +       TG++ + A +  ILS    +PLP          +R+
Sbjct: 103 KH--LEVGDIVL---VKGFPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRY 156

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+LDL  +   K++ K R+ I++S+R     E F+E  TP++        AR F+   
Sbjct: 157 RQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFETEGFLEVETPMMHPIPGGANARPFITYH 216

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              +   Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++ 
Sbjct: 217 NALEVERY-LRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYH 274

Query: 245 EQDDILNTMENVLRGVFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
             +D++   + +   + +          ++     N    I Y DA+   G    D+
Sbjct: 275 TYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVISYLDALETIGGISKDI 331



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   GMPP  G   GIDR+VMLL GAK++++V LFP  +
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMR 489


>gi|295101792|emb|CBK99337.1| Aspartyl/asparaginyl-tRNA synthetases [Faecalibacterium prausnitzii
           L2-6]
          Length = 444

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 69/276 (25%), Positives = 128/276 (46%), Gaps = 22/276 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT    ++    +GS V++ G++  +R    + F+ ++D  G  Q+    +      +  
Sbjct: 3   RT-YINEVQKE-IGSTVKVQGFIENLRNSKYMAFIVLKDITGKLQITVEKEDHPELVDTI 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-----GE 117
             +  + V+ + G VM       N  +  G IE+  + I I S+A+ LP+         +
Sbjct: 61  DKLTPDSVITVTGKVME------NDYVKMGGIEMIPEAIAIESIADALPIVRKEIAATKK 114

Query: 118 REYPE----SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
           ++  E      R  YR++DLR D        ++  +N+MR  ++  +FIE  TP L A++
Sbjct: 115 KKAVERSSIDQRIDYRWIDLRTDENQLMFKAQSCFVNAMRQFLLERSFIETHTPKLIAAA 174

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            E   +       ++ ++ A  Q+PQ YKQ+ MA+GF+R F+  P FR E   +++   E
Sbjct: 175 SESGSEVFKVDYFDRNAYLA--QSPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHSTE 232

Query: 234 FYQLDMEMSFVE-QDDILNTMENVLRGVFEEFSNGN 268
           F   D+E S++    D++   E +L    +      
Sbjct: 233 FSGFDLEFSYITSYKDVMKMEEELLTAGLKAVKEQY 268



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 49/129 (37%), Gaps = 28/129 (21%)

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
             EF +I D                   F   +            +     YDL+  G E
Sbjct: 332 GHEFLFITD------------YSAEKRAFYHMRDE----------NGVPQGYDLIWRGVE 369

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I +G  R H  +V+ +     G++     +        FQ G PPHGG   GIDR+ MLL
Sbjct: 370 ITTGAQREHRYDVLKKQAEEKGLA-----DDVKFYLEFFQYGCPPHGGFGLGIDRLTMLL 424

Query: 551 LGAKNVREV 559
            G +++++ 
Sbjct: 425 CG-QSIKDA 432


>gi|189502178|ref|YP_001957895.1| asparaginyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|189497619|gb|ACE06166.1| hypothetical protein Aasi_0788 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 477

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 66/296 (22%), Positives = 110/296 (37%), Gaps = 33/296 (11%)

Query: 1   MHRYRTHSCGDLGVSD-VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSA 57
           M R +     +L +++ VG+ V + GWV   R    ++F+ + D   I  +     P+  
Sbjct: 1   MKRIK---IKELFIANPVGTKVCIKGWVRTKRISKQVVFIMLNDGSTIHNLQIVTEPEKF 57

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             +I + + +   L + G V++              IEL A  IEIL  A + PL     
Sbjct: 58  AEDIMQHIATGVSLSVCGTVIASQGGNQA-------IELQADTIEILGTATDYPLQPKKH 110

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                    +   L  R +T       R  I  ++      + F+   TPI+TA   EGA
Sbjct: 111 ---SLEFLREIAHLRFRTNTFSAVFRIRHAISYAIHQFFHEQGFVYLHTPIITAVDAEGA 167

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQL-------LMASG----------FDRYFQIAPCF 220
            +    + +N       PQ    +K+        L  SG              +   P F
Sbjct: 168 GEMFSVTTLNMEQLPKTPQGQVDFKRDFFGQKTSLTVSGQLEAEAAALGLAEVYTFGPTF 227

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           R E+  + R   EF+ ++ EM+F +  D +   E  L+ V             FL+
Sbjct: 228 RAENSNTTRHLAEFWMVEPEMAFYDLADNIALAERFLKYVIGFALEHCKDDLEFLQ 283



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 26/146 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +  +   I ++P             A   F M Q         D  ++ A  
Sbjct: 352 HERYLVEKHFTKPVIITNYP------------RAIKAFYMHQQE-------DGKTVAAM- 391

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            D++  G  EI  G  R    + + +A  ++G++  +++            G  PH G  
Sbjct: 392 -DILFPGIGEIIGGSQREERLDKLTEAIQSMGMNSNILQ----WYLDTRLFGTVPHSGFG 446

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G++R+V  + G  N+R+V  FP + 
Sbjct: 447 LGLERLVQFVTGMDNIRDVIPFPRTP 472


>gi|306833900|ref|ZP_07467024.1| asparagine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304423901|gb|EFM27043.1| asparagine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 448

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 65/308 (21%), Positives = 111/308 (36%), Gaps = 24/308 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
              VG  V +  WV      G I FL +RD       V   P+          +  F   
Sbjct: 12  KDHVGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKFGEEEGTEKFNTI 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + I G+V   S             EL    +EI+  +E+ P+     +E+  
Sbjct: 72  KHLNQETSILITGIVKEDSRSKF-------GYELDVTDLEIVGHSEDYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                +R L LR       +  R  II +         FI+  +PIL+ ++ E + +   
Sbjct: 122 DFLMDHRHLWLRSRKQMAIMQVRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                 G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S
Sbjct: 182 TDYF--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++ L+  E  ++ + +   +    +   L    D   +        +     +  +
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAISLL 298

Query: 303 TEHFVHSE 310
            EH    +
Sbjct: 299 QEHENDED 306



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 51/142 (35%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M       E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVIN-----YPASFKAFYMKPVPDNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     + + K   E          + G  PH G   GI+R+V  
Sbjct: 371 EIIGGSVREDDYDALVAKMDALEMDKSEYE----FYLDLRKYGSVPHAGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|15616965|ref|NP_240178.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134959|sp|P57441|SYN_BUCAI RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|25293055|pir||H84971 asparagine-tRNA ligase (EC 6.1.1.22) [imported] - Buchnera sp.
           (strain APS)
 gi|10039030|dbj|BAB13064.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 466

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 58/296 (19%), Positives = 110/296 (37%), Gaps = 27/296 (9%)

Query: 1   MHRYRTHSCGDLGVSD--VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSA 57
           M+R    S  D+   D  V S + + GWV   R    G  F+ I D      +    ++ 
Sbjct: 1   MNR---VSISDIYKDDIIVNSLITVCGWVRNRRSSKSGFSFITIYDGSCFNSIQVIANNT 57

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
                K +    +    G  +  S + I +     + E+  +KI++L   E         
Sbjct: 58  LPNYYKEI----LHLTTGCSVMLSGKLILSIGDKQKYEIQLKKIKVLGWVENPETYPISS 113

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           +++      +   L  R + +      R  I++S+      E +    TPI+T+ + EGA
Sbjct: 114 KKHSTEYLREVAHLRSRTNLIGAIARIRNYILHSLHHFFYKEKYYWVPTPIITSLNTEGA 173

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCF 220
            +    S ++  +      +   +K+                    A    + +   P F
Sbjct: 174 GEMFRVSTLDMENIPKNLDSSVDFKKDFFGKESFLTVSGQLNLETYACSLSKVYTFGPTF 233

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           R E+  + R   EF+ L++E +F + +DI +  E +L+ V +          NFL 
Sbjct: 234 RAENSNTGRHLAEFWMLEVESAFTDLNDISDFAECMLKYVCKSLLKKCITDINFLE 289



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV N  E+  G  R     ++ +    +G+ K      +       + G  PH G   G 
Sbjct: 383 LVPNVGELIGGSQREERIAILDERLLELGLKK----EDYWWYRDLRRYGTVPHSGFGMGF 438

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R++    G  N+R++  FP + N
Sbjct: 439 ERLISYFTGITNIRDLIPFPRTVN 462


>gi|296439732|sp|Q5Z3P6|LYSX_NOCFA RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
          Length = 1128

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 10/256 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      S  G+ VR+ G + R+R +GG++F  +RD     Q+V + +      +   
Sbjct: 674 THTVAAARRSPRGTTVRVCGRLLRIRDYGGVVFALLRDWSDDIQLVIDRERVGAARSAEF 733

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
              + L   G ++  S +   +   +G++ L A    +L      PLP   +       R
Sbjct: 734 GEYFDL---GDLIEVSGQIGRSR--SGELSLLAADWRMLGKCL-HPLPDKWKGLADPEAR 787

Query: 126 FKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
            + R++D+         + KR+ ++ S+R  + +  ++E  TPIL        A  F   
Sbjct: 788 VRQRYVDMAINPETRDVLAKRSAVVRSLRESLNSWGYLEVETPILQQVHGGANATPFTTH 847

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L   G ++ F++   FR+E       P EF  L+   + 
Sbjct: 848 INAYDLDLY-LRIAPELYLKRLCVGGMEKVFELGRTFRNEGVDFSHNP-EFTILEAYEAH 905

Query: 244 VEQDDILNTMENVLRG 259
            +   +++T   +++ 
Sbjct: 906 SDYIRMMHTCRVLIQN 921



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 59/188 (31%), Gaps = 28/188 (14%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
            +      I  R  + +        G P +           + + L  +     E  + +D
Sbjct: 960  SAAVGTEITPRTGVAELRELCDRVGVPYQHGWDEGQIVLEMYEHL--VEARTEEPTFYVD 1017

Query: 440  FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
            FP             + +P T                    ++DLV  G E+ +      
Sbjct: 1018 FP------------TSVSPLTRAHRS---------TPGVTERWDLVAWGVELGTAYSELT 1056

Query: 500  MSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                  +  +   +                 +A +  MPP GG+  G+DRIVML+ G  +
Sbjct: 1057 DPVEQRRRLTEQSVLAANGDPEAMELDEDFLQALEHAMPPTGGLGMGVDRIVMLITGR-S 1115

Query: 556  VREVSLFP 563
            +RE   FP
Sbjct: 1116 IRETLPFP 1123


>gi|226226985|ref|YP_002761091.1| lysyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226090176|dbj|BAH38621.1| lysyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 523

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 56/298 (18%), Positives = 105/298 (35%), Gaps = 31/298 (10%)

Query: 5   RTHS----CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           R+HS       LG +  G  V ++G +   R  G   F  + D  G  Q+    D     
Sbjct: 60  RSHSSVAAIAALGDAQEGPEVSVAGRLVSWRGQGKTAFAHLVDMDGRLQLYFRRDDMGDA 119

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
           +   +    +    G  +      I     TG+  +    +E+LS +         +   
Sbjct: 120 VFAQLAEYDL----GDWVGVRGTMIRTR--TGEATVKVTHVELLSKSLRPLPLGKEQMVD 173

Query: 120 ---------YPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                         R + R+ DL     +      R+ +  ++R  +    ++E  TP+L
Sbjct: 174 GQLVRYSAFSDTEQRARQRYADLAVHPEVRALFRARSVLTRAVRSHLDGLGYLEVETPVL 233

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   AR F+          Y L  A + Y + L+  GF+R ++I   FR+E     
Sbjct: 234 QPLYGGAAARPFVTHHNALDMPLY-LRIADELYLKRLIVGGFERVYEIGHDFRNEGIDRT 292

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN-------GNTVSNNFLRICY 279
             P EF  L+   +F +   +++ +E+++    +             +    F RI +
Sbjct: 293 HNP-EFTMLEFYEAFADYTTMMSRVESLIMAAADAIRGIPGVGEKIPSFVTPFPRIEW 349



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 68/176 (38%), Gaps = 26/176 (14%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELG--IINCNCFEFCWIMDFPFYEWNEEEKKIDF 454
           D+      + +     A  +R  +  E+   ++     +  +++D+P        K++  
Sbjct: 366 DAELRALAERIGVQKVATLSRPKVLDEMFQALVESKIDQPTFVLDYP--------KELSP 417

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
              P      G               +++L   G E+A+     +      + F      
Sbjct: 418 LAKPKRGGPDG------------ITERFELFAKGKELANAFSELNDPIDQRERFEAQARL 465

Query: 515 KEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           ++  ++   G      RA + GMPP GG+  GIDR+ M L   +N+R+V LFP  +
Sbjct: 466 RDAGDDEASGVDDDYLRAMEYGMPPTGGVGIGIDRLFMYLTDTQNIRDVILFPTMR 521


>gi|209523130|ref|ZP_03271686.1| lysyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209496281|gb|EDZ96580.1| lysyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 522

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 58/311 (18%), Positives = 111/311 (35%), Gaps = 8/311 (2%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R+ G +   R  G I F+ + D     Q+         +   +      L   G  +   
Sbjct: 66  RVCGRITFKRDSGSIGFIGLTDASATIQLKIEKKLVTGDPGLTFNQIKKLLDIGDFIGVE 125

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
                 N   G++ +   +++++S A  +P P          +  ++R +DL  + T  +
Sbjct: 126 GIGCRTN--RGELSIQVSRLDVISKA-TIPFPDSYYGINDPELCRRHREIDLVSNSTSLQ 182

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
               R+RII S+R  +    F E  TP+L T      AR F+          Y L  A +
Sbjct: 183 RFKLRSRIIRSIRTYLWNAGFDEIETPVLQTIYGGAAARPFITHHNALDIDLY-LRIATE 241

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + +  +  G ++ F+I   FR+E   S   P EF  +++  ++ +   I+  +E+++  
Sbjct: 242 LFLKRAVCGGMEKVFEIGRVFRNEGIDSTHNP-EFTSIEVYQAYADYFQIMALVEDLICA 300

Query: 260 VFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
           V  E       +     +I  D                  +  + E         F  + 
Sbjct: 301 VATEVLGGSTQIDYQGDKISIDRQYDYSNIYPTFTGKHWRVKTMVEAVRDETGLDFDTLE 360

Query: 319 SVNPGYEVWAI 329
                 +  AI
Sbjct: 361 FSEAKSKAEAI 371



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 25/142 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           E  +I+DFP  E +   K+           + G               +++L  +G E +
Sbjct: 401 EPTFIIDFPV-EVSPLAKR--------HRSKPGFVE------------RFELFIHGTEYS 439

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G    +      Q F      K+  ++          +A   GMP  GG+  G+DR+VM
Sbjct: 440 NGFSELNDPVDQRQRFEEQLAQKQAGDDEAHPMDEDFIQALSLGMPNCGGMGIGVDRLVM 499

Query: 549 LLLGAKNVREVSLFPMSQNFCD 570
            L   +++R+  LFP  ++F D
Sbjct: 500 FLTDTQSIRDAILFPTMRSFKD 521


>gi|325116654|emb|CBZ52207.1| putative lysyl-tRNA synthetase [Neospora caninum Liverpool]
          Length = 598

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 20/263 (7%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF------EIAKSVRSEWVL 71
             V+++G + RV   G  + F DIR      QV++N            EI    R   V+
Sbjct: 123 EEVQIAGRITRVSASGQKLRFYDIRGDGEKIQVMSNFSYHDEKAGDFSEIHNRFRRGDVI 182

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G                G++ +  +++ +LS    +       +++   +RF++R+L
Sbjct: 183 GIRG---------FPGKSKRGELSIFPREVTLLSPCLHMLPERNTLKDF--EVRFRHRYL 231

Query: 132 DLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL  +    K  + R+RI+N +R  + A  F+E  TP++   +   A         +   
Sbjct: 232 DLIVNDETRKTFLIRSRIVNFLRHFLEARGFVEVETPMMNVIAGGAAARPFKTHHNDLDM 291

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              +  AP+ + ++L+  G DR F+I   FR+E       P EF   +   ++ + +D++
Sbjct: 292 DLYMRIAPELFLKMLIVGGLDRVFEIGKNFRNEGIDMTHNP-EFTACEFYWAYADYNDLM 350

Query: 251 NTMENVLRGVFEEFSNGNTVSNN 273
           +  E +L  +         +  +
Sbjct: 351 DLTEELLSSMVMALHGTYQIQYH 373



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 48/127 (37%), Gaps = 8/127 (6%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E   + K +    +P  M           +L      +++L   G E+ +     +    
Sbjct: 450 ECQAQTKPVFITEHPQIMSPLAKWHRSKPEL----TERFELFVMGKELCNAYTELNDPVK 505

Query: 504 MLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             + F +   +K   ++           A + G+PP GG   GIDR+ M L     ++EV
Sbjct: 506 QRECFMDQAKAKAAGDDEAACIDEVFCTALEYGLPPTGGWGLGIDRLTMFLSDHNTIKEV 565

Query: 560 SLFPMSQ 566
            LFP  +
Sbjct: 566 ILFPAMR 572


>gi|147919871|ref|YP_686378.1| asparaginyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|110621774|emb|CAJ37052.1| asparaginyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 430

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 76/317 (23%), Positives = 136/317 (42%), Gaps = 33/317 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---IAKSVRSEWVLCID 74
           G  V++ GWV + R  G I+F  IRD  G  QV     + C +    A ++  E    I 
Sbjct: 16  GEEVQVGGWVVKNRSSGKIVFTVIRDSSGEIQVTTKKGNVCDDALREADALSLEASTIIK 75

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V +            G  EL A  ++I+  + +   P+FGE   PE +    R L +R
Sbjct: 76  GKVRTDPR-------APGGRELVATDVKIVGASRDY--PIFGEGHNPEVL-LDLRHLHIR 125

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
              L   +  +  +++S R    A  F E + PI+ +SS EG          ++ ++  L
Sbjct: 126 SKELVAIMKVKDSVLSSCREWFRASGFYEVTPPIIMSSSCEGGSTLFELKYFDEKAY--L 183

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y + L+  G ++ + + P FR E  R+ R   E++ ++ EM++V   ++++ +E
Sbjct: 184 SQSAQLYLESLIF-GLEKVYSVTPSFRAEKSRTTRHLAEYWHIEGEMAWVGLYEMIDMLE 242

Query: 255 NVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            ++  V  + +                       F RI YD+A++    D  D +     
Sbjct: 243 QLVSYVCNKTAEERHEELRMLGSDPEYFKNLKPPFPRITYDEAVKILQADGFDFKWGDDF 302

Query: 300 --HNVTEHFVHSEFRVF 314
             H   +  +H +  +F
Sbjct: 303 GTHEERQLSMHYDKPLF 319



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 31/160 (19%)

Query: 426 IINCNCFEFCWIMDF--------------PFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
           I+  + F+F W  DF              P +       +       F M   G   +  
Sbjct: 288 ILQADGFDFKWGDDFGTHEERQLSMHYDKPLF-----ITEYPLEVKAFYMKDAGNAKVLN 342

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D+++ + F         EI  G  R     ++ +     G        ++G      + 
Sbjct: 343 VDMIAPRGFG--------EIIGGSERETDLALLEERIRKQGEDP----AKYGWYLDLRRY 390

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G  PH G   G +R+V  +   +++R+   +P + +  + 
Sbjct: 391 GSVPHSGFGMGAERLVRWICNQEHIRDTIPYPRTISRFNP 430


>gi|308182356|ref|YP_003926483.1| lysyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308064541|gb|ADO06433.1| lysyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 501

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 11/246 (4%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+   
Sbjct: 59  SIVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDE-FKSLKKH--LEVGDIVL--- 112

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            +       TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K+
Sbjct: 113 VKGFPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKD 171

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           + K R+ I++S+R     E F+E  TP++        AR F+      +   Y L  AP+
Sbjct: 172 VFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALEVERY-LRIAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++   + +   
Sbjct: 231 LYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLIELSKRLFDY 289

Query: 260 VFEEFS 265
           + +  +
Sbjct: 290 LLKTLN 295



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   GMPP  G   GIDR+VMLL GAK++++V LFP  +
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMR 489


>gi|303238742|ref|ZP_07325274.1| asparaginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302593621|gb|EFL63337.1| asparaginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 464

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 62/350 (17%), Positives = 122/350 (34%), Gaps = 52/350 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHY---GITQVVANPDSACFEIAKSVRSEWVLCI 73
           + + + ++GWV  +R      F+++ D      +  V    + + F+    +     + +
Sbjct: 17  INNEITVAGWVKTIRDSKTFGFIEVNDGSFFKNLQIVFEEQNISNFKEITKIPVGSSIIV 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+++                EL A KIEI  ++     P+  +R   E +R     L  
Sbjct: 77  QGVLVETP-------NAKQPFELKASKIEIEGMSAP-EYPLQKKRHTFEYLR-TIAHLRP 127

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +T       R+    ++        F+   TPI+T S  EGA      + ++  +   
Sbjct: 128 RTNTYSAVFRIRSLAAYAIHKFFQERGFVYVHTPIITGSDAEGAGQMFRVTTLDMNNLPK 187

Query: 194 LPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +    + +                       F   +   P FR E+  + R   EF+ 
Sbjct: 188 TKEGSIDFNEDFFGKETNLTVSGQLEGETYCMAFRNIYTFGPTFRAENSNTARHAAEFWM 247

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFE----------EFSNGNTVSNNFLRI--------- 277
           ++ E++F +  D +   E++L+ +            EF N    +  F R+         
Sbjct: 248 VEPEIAFSDLSDDMELAEDMLKFIINYCMENAPEEMEFFNSFVDNTLFERLNNIVNSKFG 307

Query: 278 --CYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
              Y +AI     +K     P+       TEH  +   ++F K + V   
Sbjct: 308 HVTYTEAIELLKKEKDKFEYPVEWGTDLQTEHERYLTEQIFKKPVFVTDY 357



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 51/136 (37%), Gaps = 26/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P     +E K        F M           D  ++ A   DL+  G  EI
Sbjct: 350 KPVFVTDYP-----KEIK-------AFYMRMND-------DNKTVAAM--DLLVPGVGEI 388

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    + + +    +G+ K+             + G   H G   G +R +M + 
Sbjct: 389 IGGSQREERLDYLEKRMDELGLHKDDYW----WYLDLRKYGGTKHAGFGLGFERAIMYIT 444

Query: 552 GAKNVREVSLFPMSQN 567
           G  N+R+V  FP + N
Sbjct: 445 GMSNIRDVISFPRTVN 460


>gi|297624293|ref|YP_003705727.1| aspartyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165473|gb|ADI15184.1| aspartyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 435

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 73/294 (24%), Positives = 119/294 (40%), Gaps = 32/294 (10%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H   DL    +G  V L GWV+  R  GGI FL +RD  G+ Q V               
Sbjct: 15  HLISDL-PEALGQTVTLQGWVYSRRDLGGIRFLLLRDRSGVVQCVFGKTELPLAE----- 68

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYPESI 124
               + + G V              G +E+ A+ +E+++ A E P     +         
Sbjct: 69  --SCVRVTGRVAESPK-------APGGLEVHAEALELITNAAEPPPIEIPKEAWHVNPDT 119

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
             +YR + LR       +  +  ++ + R  + AE F E  TP L A+  EG        
Sbjct: 120 LLEYRHVSLRSPKARAALKVQAELVRAFREVLSAEGFTEIFTPKLVAAGAEGGAALFEVD 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              + ++ A  Q+PQ YKQ +M   F+R F++AP +R E   + R   E+  LD+E+ F+
Sbjct: 180 YYGKRAYLA--QSPQLYKQ-IMVGVFERVFEVAPVYRAELSHTSRHLSEYLSLDVELGFI 236

Query: 245 E-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +  +D++   E +L+ +  + +                     G   PDL  P 
Sbjct: 237 DSDEDVMALEERLLKAMMRDVAER-----------CAPEFALLGAAAPDLSAPF 279



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 49/124 (39%), Gaps = 6/124 (4%)

Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
           W +EE+  DF     T                     +DL+  G EI SGG R H    +
Sbjct: 315 WAKEERGSDFVF--VTNYPQAARPFYTYPTDDGLTRGFDLLFRGVEITSGGQRVHEYGTL 372

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +       +        F G    F+ GMPPHGG A G +R+  LLLG  NVR    FP 
Sbjct: 373 IAQLRARNLDP----EAFRGYLEVFKYGMPPHGGFAIGAERLTALLLGIANVRFARAFPR 428

Query: 565 SQNF 568
             + 
Sbjct: 429 DGSR 432


>gi|283768889|ref|ZP_06341799.1| asparagine--tRNA ligase [Bulleidia extructa W1219]
 gi|283104442|gb|EFC05816.1| asparagine--tRNA ligase [Bulleidia extructa W1219]
          Length = 462

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 111/279 (39%), Gaps = 15/279 (5%)

Query: 4   YR-THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           YR T S  +L    V  +V+L GW+   R    + F+ + D    +      D+      
Sbjct: 11  YRLTKSEVELEKDQV-EYVQLQGWIRTNRAGKNVSFISLNDGTYFSNAQIVYDANTLSNY 69

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + V       + G  +S   + I         E+ A++I +  +A+    P+  +R   E
Sbjct: 70  EEVSKY----LTGTAISVIGKLILTPDAKQPFEVQAKEIRLEGLAD-HTYPLQKKRHSLE 124

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +   L  R +TL      R+ +  ++      + F+  +TPI+T +  EGA +   
Sbjct: 125 YLR-EIAHLRPRTNTLSAVFRVRSVLAMAIHTFFQEQGFVYVNTPIITGADAEGAGETFT 183

Query: 183 PSRVN----QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            +       +  F+    +     Q +    A  F   +   P FR E+  +     EF+
Sbjct: 184 VTTNYGEKMEEDFFGKHASLTVSGQLQAEAFALAFRDVYTFGPTFRAEESNTTTHAAEFW 243

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
            ++ EM+F + +  ++ +E++++   +          NF
Sbjct: 244 MIEPEMAFADLEYDMDVIEDMVKFCIDYVMEMCPEEMNF 282



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 19/135 (14%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           ++  P +  +            F M +    +++   DL         LV    E+  G 
Sbjct: 345 VVKGPVFLTD-----YPKEIKAFYMRENEDGKTVAATDL---------LVPTVGELVGGS 390

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            R    E++ +   ++G++     + +       + G   H G   G +R+VM + G KN
Sbjct: 391 QREERLELLEKKMKDLGMNL----DNYQWYLDLRRYGGCEHAGFGLGFERLVMYVTGMKN 446

Query: 556 VREVSLFPMSQNFCD 570
           +R+V  F  +    D
Sbjct: 447 IRDVIPFARTPKNLD 461


>gi|313113843|ref|ZP_07799409.1| OB-fold nucleic acid binding domain protein [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310623809|gb|EFQ07198.1| OB-fold nucleic acid binding domain protein [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 444

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 72/321 (22%), Positives = 138/321 (42%), Gaps = 32/321 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT    +   + +G  V++ G++  +R    + F+ ++D  G  Q+    +      +  
Sbjct: 3   RT-YINEAQKA-IGGTVKVQGFIENLRNSKYMAFIVLKDITGKLQITVEKEDHPDLVDTI 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-----GE 117
             +  + V+ + G V+       N  +  G +E+  + IEI S+A  LP+         +
Sbjct: 61  DQLTPDSVITVTGKVVE------NDYVKMGGVEMIPESIEIESIANALPIVRKEIAATKK 114

Query: 118 REYPE----SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
           ++  E      R  YR++DLR D        ++  +N+MR  ++  NFIE  TP L A++
Sbjct: 115 KKAVERSSIDQRIDYRWIDLRTDENQLMFKAQSCFVNAMRKFLLDRNFIEIHTPKLIAAA 174

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            E   +       ++ ++ A  Q+PQ YKQ+ MA+GF+R F+  P FR E   +++   E
Sbjct: 175 SESGSEVFKVDYFDRNAYLA--QSPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHSTE 232

Query: 234 FYQLDMEMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           F   D+E S++    D++   E +L    +   +             D     +G +   
Sbjct: 233 FSGFDLEFSYITSYKDVMKMEEELLTAGLQAVKDNY----------GDQIKEMFGQEVIV 282

Query: 293 LRNPIIMHNVTEHFVHSEFRV 313
              P  +  + + +   E   
Sbjct: 283 PTTPFPVVKLADLYKGLEEEF 303



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 47/129 (36%), Gaps = 28/129 (21%)

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
             EF +I D                   F   +            +     YDL+  G E
Sbjct: 332 GHEFLFITD------------YSAEKRAFYHMRDE----------NGVPQGYDLIWRGVE 369

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I +G  R H  EV+ +     G++     +        FQ G PPHGG   GIDR+ MLL
Sbjct: 370 ITTGAQREHRYEVLKKQAEEKGLA-----DDVKFYLEFFQYGCPPHGGFGLGIDRLTMLL 424

Query: 551 LGAKNVREV 559
            G   +++ 
Sbjct: 425 CGL-TIKDA 432


>gi|260101289|ref|ZP_05751526.1| asparagine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260084874|gb|EEW68994.1| asparagine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 432

 Score =  173 bits (439), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 74/323 (22%), Positives = 122/323 (37%), Gaps = 34/323 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      FE+AKS+R E 
Sbjct: 10  SSKHVDQEVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVTDEVFEVAKSLRQES 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G V   +             E+    ++++S  E       G +E+       +R
Sbjct: 70  SFYITGTVHEDARSHF-------GYEIQITDLKVVSNNE---GYPIGNKEHGIDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +  +       E+FI+   PI   S+PEG          +  
Sbjct: 120 HLWLRSKKPFAIMQIRNTMFKATVDFFEKEDFIKFDAPIFMHSAPEGTTQLFHVDYFDHD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  F + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMAFGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDL 293
           L+  E  L  + ++  + N                    NF+R+ YDDA++       D 
Sbjct: 237 LDLQERYLAYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFVRLPYDDAVKMLQDAGRDF 296

Query: 294 RNPIIMH--NVTEHFVHSEFRVF 314
           +        +        +  VF
Sbjct: 297 KWGDDFGAPDEGYISEQYDRPVF 319



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 28/175 (16%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEE 449
           +G+       D +K    A         + G  +            +I+++P        
Sbjct: 274 EGNFVRLPYDDAVKMLQDAGR-DFKWGDDFGAPDEGYISEQYDRPVFIVNYP-------- 324

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                +  PF M +      +      I    Y       EI  G  R    EV+ Q   
Sbjct: 325 ----TSIKPFYMKKNPDNPKEYLCADVIAPEGY------GEIFGGSEREGNYEVLKQQII 374

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + G++ E  +          + G  PH G   G +R +  +    ++RE   FP 
Sbjct: 375 DAGLNLEDYQ----WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPR 425


>gi|268679216|ref|YP_003303647.1| lysyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617247|gb|ACZ11612.1| lysyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 506

 Score =  173 bits (439), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 104/243 (42%), Gaps = 8/243 (3%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D      + G +  +R  G   F  I D +GI Q+  + +S         +    L   G
Sbjct: 54  DENKNNTIVGRIKFLRHMGKAAFAKIEDEHGILQIYFSRESIGEAWFDEAKK---LIEVG 110

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            +++ S         TG++ L  + ++I + +  +PLP        + +R++ R+LD+  
Sbjct: 111 DIITVSG--FPFVTKTGELSLHVKALDIATKS-IIPLPEKFHGLQDKELRYRKRYLDMIM 167

Query: 136 DT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           ++ + K    R++I++ +R      +F+E  TP++   +        V      G    L
Sbjct: 168 NSDVRKTFKIRSKIVSEIRHFFEERDFLEVETPMMHPIAGGANAKPFVTHHNALGVDRYL 227

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++    D+++  E
Sbjct: 228 RIAPELYLKRLVVGGFEAVFEINRNFRNEGMDQTHNP-EFTMIEFYWAYHNYHDLMHLSE 286

Query: 255 NVL 257
            + 
Sbjct: 287 EMF 289



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 33/172 (19%)

Query: 419 HIAQELG--IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            + +EL    +     +  +I+D+P  E +   ++ +   +                   
Sbjct: 360 KLYEELFDLFVEEKLIDPTFIIDYPI-EISPLARRSESNPH------------------- 399

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCG 532
             A +++L   G EIA+G    +      + F+    +K                A   G
Sbjct: 400 -IAERFELFIAGREIANGFNELNDPIDQYERFAKQLQAKNAGDDEAHEMDEDYVHALGYG 458

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGS--PSTVSVE 582
           +PP  G   GIDR+ MLL    ++++V LFP        L  +  P+    E
Sbjct: 459 LPPTAGQGMGIDRLTMLLTNEASIKDVILFP----AMKPLNEADEPTQKDEE 506


>gi|302407898|ref|XP_003001784.1| lysyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261359505|gb|EEY21933.1| lysyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 606

 Score =  173 bits (439), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 57/294 (19%), Positives = 126/294 (42%), Gaps = 15/294 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKS-----VR 66
           G  +    +R+   ++  R  G  ++F D+R      QV+        +++       +R
Sbjct: 115 GEHNKDKILRVGARIYNKRASGSKLVFYDVRVEGVKVQVMCQAQEVTGDVSFDDQHLHLR 174

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ I G     + ++       G++ + A +I++L+      LP        +  RF
Sbjct: 175 RGDIIGIVGYPGRTAPKSKLEKGEEGELSIFATEIKLLTPCL-HNLPDEYYGLKDQEERF 233

Query: 127 KYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL  +   +N  + R++++  +R  +   +F+E  TP + A +    A+ F+   
Sbjct: 234 RKRYLDLMMNDRSRNTLITRSKMVTYIRRYLDERDFVEVETPQMNAIAGGATAKPFITYH 293

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                + + +  AP+ Y + L+  G +R ++I   FR+E       P EF   +   ++ 
Sbjct: 294 NELDMTMF-MRIAPELYLKELVVGGLNRVYEIGRQFRNEGLDLTHNP-EFTTCEFYEAYA 351

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +  D++NT E+++ G+ +  + G     +         +     +KP  R  +I
Sbjct: 352 DVYDLMNTTEDLVSGLVKHLTGGYKTQFH----TQTGEVYEVNWEKPWKRFEMI 401



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 6/124 (4%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E+ EE+         F  PQ      K +  +     +++      EI +     +    
Sbjct: 454 EYIEEQCVSPS--FIFGHPQVMSPLAKYHRSMPGLCERFEAFVCKKEIVNAYTELNDPFD 511

Query: 504 MLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
               F      K+  ++           + + G+PP  G   GIDR+VM L     +REV
Sbjct: 512 QRLRFEEQARQKDQGDDEAQMIDENFCMSLEYGLPPTAGWGMGIDRMVMFLTDHYTIREV 571

Query: 560 SLFP 563
             FP
Sbjct: 572 LAFP 575


>gi|160880706|ref|YP_001559674.1| lysyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160429372|gb|ABX42935.1| lysyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 489

 Score =  173 bits (439), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 110/264 (41%), Gaps = 11/264 (4%)

Query: 6   THSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           TH   D + + D    + ++G +  +R  G + F++I D YG  QV    D    E  + 
Sbjct: 31  THELKDAIKLLDGTKDISVAGRILSIRRMGKLCFVNIGDIYGKLQVAIRRDDVGEEAYEF 90

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
            R  + +   G  +  S E       TG+  + AQK+  L  A   PLP        +  
Sbjct: 91  FRQGFDI---GDFLGVSGEIF--TTQTGEKTIRAQKLTFLGKA-FKPLPEKFHGITDKDS 144

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLV 182
            ++ R+LDL  +   +N    + ++I  +R  +    ++E  TP+L    S   AR F+ 
Sbjct: 145 CYRQRYLDLIMNEDTRNRFLLKFQMIKEIRRYLEDSGYLEVETPVLNDKPSGATARPFIS 204

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                      L  AP+ Y +  +  G  + F+ A CFR+E   +     +F  L+   +
Sbjct: 205 HHNALDME-VNLRIAPETYLKRCIVGGIPKVFEFARCFRNEGMDAT-HLQDFTMLEGYCA 262

Query: 243 FVEQDDILNTMENVLRGVFEEFSN 266
           +    D +  ++ +L  V ++   
Sbjct: 263 YYNYTDNMKFLQTMLATVIKKVFG 286



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
           + ND       ++ L+ NG E+ +            +      ++K   +          
Sbjct: 385 RANDDNKEIVDRFQLIINGAEVINAYSELVDPVEQKKRLMEQALAKANGDEEAMTMDYDY 444

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP  G   G+DR + ++ G +N+R+  LFP+ +
Sbjct: 445 ITAMEYGMPPISGWGMGVDRFLQVITGQENLRDTVLFPIMR 485


>gi|161507621|ref|YP_001577575.1| asparaginyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|172048289|sp|A8YVJ7|SYN_LACH4 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|160348610|gb|ABX27284.1| Asparaginyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 432

 Score =  173 bits (439), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 74/323 (22%), Positives = 122/323 (37%), Gaps = 34/323 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      FE+AKS+R E 
Sbjct: 10  SSKHVDQEVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVTDEVFEVAKSLRQES 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G V   +             E+    ++++S  E       G +E+       +R
Sbjct: 70  SFYITGTVHEDARSHF-------GYEIQITDLKVVSNNE---GYPIGNKEHGIDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +  +       E+FI+   PI   S+PEG          +  
Sbjct: 120 HLWLRSKKPFAIMQIRNTMFKATVDFFEKEDFIKFDAPIFMHSAPEGTTQLFHVDYFDHD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  F + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMAFGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDL 293
           L+  E  L  + ++  + N                    NF+R+ YDDA++       D 
Sbjct: 237 LDLQERYLAYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFVRLPYDDAVKMLQDAGRDF 296

Query: 294 RNPIIMH--NVTEHFVHSEFRVF 314
           +        +        +  VF
Sbjct: 297 KWGDDFGAPDEGYISEQYDRPVF 319



 Score = 63.9 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 28/175 (16%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEE 449
           +G+       D +K    A         + G  +            +I+++P        
Sbjct: 274 EGNFVRLPYDDAVKMLQDAGR-DFKWGDDFGAPDEGYISEQYDRPVFIVNYP-------- 324

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                +  PF M +      +      I    Y       EI  G  R    EV+ Q   
Sbjct: 325 ----TSIKPFYMKKNPDNPKEYLCADVIAPEGY------GEIFGGSEREGNYEVLEQQII 374

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + G++ E  +          + G  PH G   G +R +  +    ++RE   FP 
Sbjct: 375 DAGLNLEDYQ----WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPR 425


>gi|156841338|ref|XP_001644043.1| hypothetical protein Kpol_1026p33 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114676|gb|EDO16185.1| hypothetical protein Kpol_1026p33 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 445

 Score =  173 bits (439), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 73/287 (25%), Positives = 117/287 (40%), Gaps = 24/287 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPD----SACFEIAK 63
           +L  S  G  V     VH  R  G  + FL +R    + Q  V  N D        + A 
Sbjct: 99  ELTESMDGQTVLFRARVHNTRQQGATLAFLTLRQEGELIQALVRCNKDGSITKKMTKWAG 158

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           S+  E ++ + G V        +A I    +E+   +I  +S   E    +  +    + 
Sbjct: 159 SLNLESIVLVRGEVKKVEEPIKSATI--QNLEIHITQIHSISETPENLPILLEDASRSDE 216

Query: 124 -------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                         R   R +DLR  T       ++ +    R  +I + F E  TP L 
Sbjct: 217 QAEKAGLPVVNLDTRLDARVIDLRTITNQAIFRIQSGVCQLFREFLINKKFTEVHTPKLL 276

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            ++ EG  +    S       Y L Q+PQ +KQ LM + F+R F+IAP FR E+  + R 
Sbjct: 277 GAASEGGANVFEVSYFKDAKAY-LAQSPQFHKQQLMVADFERVFEIAPVFRAENSNTHRH 335

Query: 231 PGEFYQLDMEMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
             EF  LD+EM+F E   ++++T+  +   +F E +         +R
Sbjct: 336 MTEFTGLDLEMTFEENYHEVMDTLSELFVFIFGELNKRFAKEIETVR 382


>gi|118465579|ref|YP_879834.1| lysyl-tRNA synthetase [Mycobacterium avium 104]
 gi|254773510|ref|ZP_05215026.1| lysyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291]
 gi|118166866|gb|ABK67763.1| lysyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 499

 Score =  173 bits (439), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 60/270 (22%), Positives = 114/270 (42%), Gaps = 20/270 (7%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPD 55
           RTH+   +  +             V ++G V   R  G + F  +++  G T QV+ + D
Sbjct: 37  RTHTLAQVRAAHPDLPVDTATDDVVGVAGRVIFARNSGKLCFATLQEGDGTTLQVMVSLD 96

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +++  L   G ++S     I++    G++ + A    + S +        
Sbjct: 97  KVGREALDAWKADVDL---GDIVSVHGTLISSR--RGELSVLADSWRMASKSLRPLP--V 149

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL      + +  +R  +I ++R  +    F+E  TP+L   + 
Sbjct: 150 AHKEMSEEARVRQRYVDLIVRPQARTVARQRIAVIRAIRNALERRGFLEVETPMLQTLAG 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  GFD+ F++   FR+E   S   P E
Sbjct: 210 GAAARPFVTHSNALDIDLY-LRIAPELFLKRCVVGGFDKVFELNRVFRNEGADSTHSP-E 267

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++   DD       +++ V +E
Sbjct: 268 FSMLETYQAYGTYDDSAVVTRELIQEVADE 297



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 26/135 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ DFP                P T     ++             ++DL   G E+A
Sbjct: 381 APTFVRDFP------------VETTPLTRQHRSID---------GVTEKWDLYVRGVELA 419

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G        V  + F+    +    ++           A + GMPP  G   GIDR++M
Sbjct: 420 TGYSELTDPVVQRERFAAQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLM 479

Query: 549 LLLGAKNVREVSLFP 563
            L G  ++RE  LFP
Sbjct: 480 TLTGL-SIRETVLFP 493


>gi|195426483|ref|XP_002061362.1| GK20765 [Drosophila willistoni]
 gi|194157447|gb|EDW72348.1| GK20765 [Drosophila willistoni]
          Length = 534

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 64/270 (23%), Positives = 112/270 (41%), Gaps = 23/270 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAK---SVRSEWVLCIDGL 76
           V + G VH  R  G   FL +R     I  ++A  D    ++ K   ++  E ++ I   
Sbjct: 92  VWVRGRVHTSRAKGKQCFLILRQQSSTIQCILAVNDIISKQMVKFTGNIPKESIIDIQAK 151

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE-------------- 122
            +S   +  +    T  +EL  +++ ++S A+        +   PE              
Sbjct: 152 PVSVPNKIESCTEQT--VELCVEQVFVISQAKPQLPLQIEDASRPENPDDAEGLNIRVNQ 209

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R   R LDLR             +    R  +  + F E  TP + +++ EG  +   
Sbjct: 210 DTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPKIISAASEGGANVFT 269

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            S     ++ A  Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R   EF  LD+EM+
Sbjct: 270 VSYFKDSAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVGLDLEMA 327

Query: 243 FV-EQDDILNTMENVLRGVFEEFSNGNTVS 271
           F     ++L+T+ N    +F+   +  +  
Sbjct: 328 FKYHYHEVLHTIGNTFTAIFKGLRDQYSRE 357



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                 I +  YD+   G EI SG  R H  E +++   +
Sbjct: 426 KFPLAIRPFYTMPD--------PNNPIYSNSYDMFMRGEEILSGAQRIHDPEYLIERAKH 477

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI       +      +F+ G PPH G   G++R+VML LG  N+R+ S+FP       
Sbjct: 478 HGIDTT----KIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLT 533

Query: 571 L 571
            
Sbjct: 534 P 534


>gi|332879103|ref|ZP_08446804.1| asparagine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332682903|gb|EGJ55799.1| asparagine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 476

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 54/275 (19%), Positives = 103/275 (37%), Gaps = 30/275 (10%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDGLV 77
            + L GWV   R +    F+ + D   I  V    D      E+ K + +   + + G V
Sbjct: 17  EITLKGWVRTFRSNR---FIALNDGSTIENVQVVVDFENTDPELLKRITTGAAIEVKGQV 73

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    +          +E+ A  I IL  +     P+  ++   E +R +   L +R +T
Sbjct: 74  VESQGKGQA-------VEVQATTISILGDSNPEEYPIQPKKHSLEFLR-ENAHLRVRSNT 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---------- 187
               +  R+ +  ++        F   +TPI+T S  EGA +    + ++          
Sbjct: 126 FSAVMRVRSTLAYAIHKYFQDNGFFYVNTPIITGSDAEGAGEMFRVTTLDAKNPPLTEDG 185

Query: 188 ----QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
               +  F+          Q +    A    + +   P FR E+  + R   EF+ ++ E
Sbjct: 186 KVDYKKDFFGRETNLTVSGQLEGETFAMALGKIYTFGPTFRAENSNTSRHLAEFWMIEPE 245

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           M+F +  D +N  E+ ++ V +           FL
Sbjct: 246 MAFFDLIDNMNLAEDFIKYVLKYTLEVRRDDLEFL 280



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 14/121 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M          +D  +++A   D++  G  EI  G  R    EV+ +  +
Sbjct: 368 DYPANIKAFYMR-------LNDDGKTVRAM--DILFPGIGEIVGGSQREERYEVLKKKIA 418

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           ++ + +  +           + G   H G   G +R+V+   G  N+R+V  +P +    
Sbjct: 419 DLNMDEATLW----WYLDLRKFGTAVHSGFGLGFERLVLFATGMTNIRDVIPYPRTPQSA 474

Query: 570 D 570
           +
Sbjct: 475 E 475


>gi|210134383|ref|YP_002300822.1| lysyl-tRNA synthetase [Helicobacter pylori P12]
 gi|226710888|sp|B6JPT1|SYK_HELP2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|210132351|gb|ACJ07342.1| lysyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 501

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 122/297 (41%), Gaps = 20/297 (6%)

Query: 8   SCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
              DL    D      + G V  +R  G   F+ + D   I Q   + +    E  KS++
Sbjct: 44  YVKDLEEPKDKEKCESIVGRVKLLRLMGKACFIKVEDESAILQAYVSQNELNDE-FKSLK 102

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L +  +V+    +       TG++ + A +  ILS    +PLP          +R+
Sbjct: 103 KH--LEVGDIVL---VKGFPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRY 156

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+LDL  +   K++ K R+ I++S+R     E F+E  TP++        AR F+   
Sbjct: 157 RQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYH 216

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              +   Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++ 
Sbjct: 217 NALEVERY-LRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYH 274

Query: 245 EQDDILNTMENVLRGVFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
             +D++   + +   + +          ++     N    I Y DA+   G    D+
Sbjct: 275 TYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVISYLDALETIGGISRDI 331



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   GMPP  G   GIDR+VMLL GAK++++V LFP  +
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMR 489


>gi|317010462|gb|ADU84209.1| lysyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 501

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 12/261 (4%)

Query: 8   SCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
              DL    D      + G V  +R  G   F+ + D   I Q   + +    E  KS++
Sbjct: 44  YVKDLEEPKDKEKGESIVGRVKLLRLMGKACFIKVEDESAILQAYVSQNELNDE-FKSLK 102

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L +  +V+    +       TG++ + A +  ILS    +PLP          +R+
Sbjct: 103 KH--LEVGDIVL---VKGFPFATKTGELSIHALEFHILSKT-IVPLPEKFHGLSDIELRY 156

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+LDL  +   K++ K R+ I++S+R     E F+E  TP++        AR F+   
Sbjct: 157 RQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYH 216

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              +   Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++ 
Sbjct: 217 NALEIERY-LRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYH 274

Query: 245 EQDDILNTMENVLRGVFEEFS 265
             +D++   + +   + +  +
Sbjct: 275 TYEDLIELSKRLFDYLLKTLN 295



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F +    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKSQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL GAK++++V LFP
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|170589884|ref|XP_001899703.1| Aspartyl-tRNA synthetase [Brugia malayi]
 gi|158592829|gb|EDP31425.1| Aspartyl-tRNA synthetase, putative [Brugia malayi]
          Length = 535

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 72/315 (22%), Positives = 125/315 (39%), Gaps = 25/315 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           D+ V+  G  + + G +H  R  G   F+ IR       G+  V         +   ++ 
Sbjct: 81  DVFVNLEGHEIWIRGRLHTSRIKGKTCFIIIRQRMHSIQGMLSVGKEISKQMLKFVGNIS 140

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV-------FGERE 119
            E ++ + G+V     E  +      ++E+   ++ ++S AE               E +
Sbjct: 141 KESIIDVRGVVKKVEQEITSCTQK--KVEVHITQLFVVSTAEPRLPLQIEDAARIKEEGK 198

Query: 120 YPES---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
             E           R   R LDLR  T H     +  +    R  +    F+E  TP + 
Sbjct: 199 STEDSCLSVVNLDTRLDNRVLDLRTQTSHAIFSIQDGVCELFRNTLKKRGFMEIHTPKII 258

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           +++ EG  +    S   + ++ A  Q+PQ YKQ+ +A+ FD+ F I   FR ED  + R 
Sbjct: 259 SAASEGGANVFEVSYFKRSAYLA--QSPQLYKQMAIAADFDKVFTIGAVFRAEDSNTHRH 316

Query: 231 PGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             EF  LD+EM+F     ++L T+  VL  +F++           +   Y      +   
Sbjct: 317 LTEFVGLDIEMAFKFHYHEVLETIGAVLIDIFKDLQAKFKHEIEIVDKQYPCEPFEFVEP 376

Query: 290 KPDLRNPIIMHNVTE 304
              LR P  +  + E
Sbjct: 377 ALILRYPDAVKLLRE 391



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   A  PF            ND     +  YD+   G EI SG  R H + ++ +   +
Sbjct: 427 RYPLAVRPFYTMPDA------NDPK--YSNSYDMFMRGEEILSGAQRIHDASLLTERAKH 478

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I       +      +F+ G PPH G   G++R+ ML LG  NVR  SLFP       
Sbjct: 479 HQIDL----EKIRAYIDSFKFGCPPHAGGGIGLERVTMLFLGLGNVRLASLFPRDPRRLT 534

Query: 571 L 571
            
Sbjct: 535 P 535


>gi|149003235|ref|ZP_01828131.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147758695|gb|EDK65692.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 377

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 65/303 (21%), Positives = 111/303 (36%), Gaps = 40/303 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD 292
           + D
Sbjct: 301 END 303


>gi|87307059|ref|ZP_01089205.1| lysyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87290432|gb|EAQ82320.1| lysyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 686

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 68/342 (19%), Positives = 131/342 (38%), Gaps = 29/342 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSEWV 70
            S  G  VR++G +  +RP G ++F D+RD  G  Q+    +       +IA+ +    +
Sbjct: 246 TSFAGPKVRIAGRIVLMRPTGKLVFADLRDRTGRIQIFIGQNQVGERNWQIAQCLDLADI 305

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + +DG +             TG++ +  +++  L+   + P P   +      +R + R+
Sbjct: 306 IGVDGELR---------KTKTGELTIFVEQLHFLTKTLD-PPPEKHKGLTDPELRQRMRY 355

Query: 131 LDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDL   D   +  VKRT I+ S+R  +  +NFIE   P L A +   A    +      G
Sbjct: 356 LDLAHTDGAIERFVKRTEIVKSIRKTLADQNFIEIEGPTLHAIAGGAAARPFITHHNALG 415

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               +  A + + + L+  G +R F++   +R+E       P EF  L++  ++ +   +
Sbjct: 416 MELYMRIALELHLKRLLVGGMERVFELGRVYRNEGISPKHNP-EFTMLEVYQAYGDYRSM 474

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++  E V+ G          +               YG    +   P       E F  +
Sbjct: 475 MDLTEAVISGAINAIGASFELP--------------YGETMVNFAPPFERRTYAELFQEN 520

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
                +   +V        +  +G   +    +   E    Q
Sbjct: 521 TGVDPTDDAAVKRYAINLGLETEGKHPDVIRNEIFEEKVEDQ 562



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 8/123 (6%)

Query: 448 EEKKIDFAHNP-FTMPQGGME---SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           EEK  D    P F M         + +  D     A +++L  NG E+A+     +  ++
Sbjct: 556 EEKVEDQLKGPIFVMDYPASICPLTKRKTD-NPAVAERFELFINGMEVANAYTELNDPDL 614

Query: 504 MLQ--AFSNVGISKEVVENRFGG-LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
             +       G + E    +      RA + GMPP GG+  GIDR+VMLL   + +RE+ 
Sbjct: 615 QDKLFRTQLDGQADEDSMAKMDHDFIRALRNGMPPAGGLGIGIDRLVMLLTNTQTIREII 674

Query: 561 LFP 563
           LFP
Sbjct: 675 LFP 677


>gi|291571166|dbj|BAI93438.1| lysyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 522

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 58/311 (18%), Positives = 111/311 (35%), Gaps = 8/311 (2%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R+ G +   R  G I F+ + D     Q+         +   +      L   G  +   
Sbjct: 66  RVCGRITFKRDSGSIGFIGLTDASATIQLKIEKKLVTGDPGLTFNQIKKLLDIGDFIGVE 125

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
                 N   G++ +   +++++S A  +P P          +  ++R +DL  + T  +
Sbjct: 126 GIGCRTN--RGELSIQVSRLDVISKA-TIPFPDSYYGINDPELCRRHREIDLVSNSTSLQ 182

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
               R+RII S+R  +    F E  TP+L T      AR F+          Y L  A +
Sbjct: 183 RFKLRSRIIRSIRTYLWNAGFDEIETPVLQTIYGGAAARPFITHHNTLDIDLY-LRIATE 241

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + +  +  G ++ F+I   FR+E   S   P EF  +++  ++ +   I+  +E+++  
Sbjct: 242 LFLKRAVCGGMEKVFEIGRVFRNEGIDSTHNP-EFTSIEVYQAYADYFQIMALVEDLICA 300

Query: 260 VFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
           V  E       +     +I  D                  +  + E         F  + 
Sbjct: 301 VATEVLGGSTQIDYQGDKISIDRQYDYSNIYPTFTGKHWRVKTMVEAVRDETGLDFDTLE 360

Query: 319 SVNPGYEVWAI 329
                 +  AI
Sbjct: 361 FSEAKSKAEAI 371



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 25/142 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           E  +I+DFP  E +   K+           + G               +++L  +G E +
Sbjct: 401 EPTFIIDFPV-EVSPLAKR--------HRSKPGFVE------------RFELFIHGTEYS 439

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G    +      Q F      K+  ++          +A   GMP  GG+  G+DR+VM
Sbjct: 440 NGFSELNDPVDQRQRFEEQLAQKQAGDDEAHPMDEDFIQALSLGMPNCGGMGIGVDRLVM 499

Query: 549 LLLGAKNVREVSLFPMSQNFCD 570
            L   +++R+  LFP  ++F D
Sbjct: 500 FLTDTQSIRDAILFPTMRSFKD 521


>gi|198418317|ref|XP_002125902.1| PREDICTED: similar to aspartyl-tRNA synthetase [Ciona intestinalis]
          Length = 533

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 62/275 (22%), Positives = 112/275 (40%), Gaps = 25/275 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDI-RDHYGITQVVANPDSACFEIAK---S 64
            GD+G +     + + G +H  R  G   F  +      I  ++   +    ++ K   +
Sbjct: 77  IGDIGPNLAEKNIWVRGRLHTSRGTGKQCFTVLRHQQSTIQALIFVGEKISKQMVKFCAN 136

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE-- 122
           +  E ++ + G+V     E    +     +E+   KI ++S A      +  +   PE  
Sbjct: 137 ISKESIVDVYGVVKKV--EQKVESCTQDDVEIHIGKIFVVSKAAPQLPLLIEDASRPELE 194

Query: 123 --------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                           R   R LDLR  T          +    R  + A+ F E  TP 
Sbjct: 195 DGKNEEGGRPRVNLDTRLDNRILDLRTTTKQAIFRLEAGVCKLFRDTLTAKGFCEIHTPK 254

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           + +++ EG  +    S     +F A  Q+PQ YKQ+ +A+ F++ F +   FR ED  + 
Sbjct: 255 IISAASEGGANVFTVSYFKTNAFLA--QSPQLYKQMAIAADFEKVFTVGAVFRAEDSNTH 312

Query: 229 RLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFE 262
           R   EF  LD+EM+F     ++L  + ++   +F+
Sbjct: 313 RHLTEFVGLDLEMAFQYHYHEVLQVIGDMFISIFK 347



 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K      PF TMP                +  YD+   G EI SG  R H  E + +   
Sbjct: 425 KYPLEVRPFYTMPDPDNPKW---------SNSYDMFMRGEEILSGAQRIHDPEFLSERAK 475

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             GI  + +E        +F+ G PPH G   G++R+VML LG  N+R  SLFP      
Sbjct: 476 AHGIDLKTIEA----YIDSFKYGCPPHAGGGIGMERVVMLYLGLHNIRSSSLFPRDPKRL 531

Query: 570 DL 571
             
Sbjct: 532 TP 533


>gi|254565875|ref|XP_002490048.1| Cytosolic asparaginyl-tRNA synthetase, required for protein
           synthesis [Pichia pastoris GS115]
 gi|238029844|emb|CAY67767.1| Cytosolic asparaginyl-tRNA synthetase, required for protein
           synthesis [Pichia pastoris GS115]
 gi|328350452|emb|CCA36852.1| asparaginyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 551

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 62/281 (22%), Positives = 117/281 (41%), Gaps = 12/281 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L   ++G+ VR+ GW+HR+R   G++F+ +RD  G  Q + + D A      +
Sbjct: 114 RTIKLRALQ-DNLGTRVRVHGWIHRLRAQKGLVFIVLRDGTGFLQCLLSGDLANAYQTST 172

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYP 121
           +  E  + + G+V    A         G +EL     EI+ +A   ++       E    
Sbjct: 173 LTLESTVTLKGIVEKLPAG----KQAPGGVELKVDYYEIIGLAPAGDDCFSNKIQEG-AD 227

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            S+    R L +R +TL   +  R  ++ ++R     E  IE + P +  +  EG     
Sbjct: 228 PSLLLDQRHLAIRGETLSAVLKVRASLLQAIRRVYDEEGVIEVTPPCMVQTQVEGGSTLF 287

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + ++  L Q+ Q Y +  +       + I   FR E   + R   E+  ++ E+
Sbjct: 288 KLQYYGEEAY--LTQSSQLYLETALP-ALGDVYCIQESFRAEKSHTRRHLSEYTHIEAEL 344

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           +F+  +D+L+ +E V+    +   N         ++    A
Sbjct: 345 AFLTFEDLLSHIERVITKTVKYVVNDPVAGPLVKQLNPGFA 385



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 40/121 (33%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+    EI  G +R      +L+ F  
Sbjct: 442 RFPLEIKSFYMKRCADDPRVTESVDV-------LMPTVGEITGGSMRIDSLNELLEGFER 494

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             + K      +       + G  PHGG   G +RI+  L     V++ SL+P     C 
Sbjct: 495 EKLDKSA----YYWFIDQRKYGTCPHGGYGLGTERILAWLCDRFTVKDCSLYPRFTGRCK 550

Query: 571 L 571
            
Sbjct: 551 P 551


>gi|229581408|ref|YP_002839807.1| lysyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012124|gb|ACP47885.1| lysyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 492

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 82/356 (23%), Positives = 148/356 (41%), Gaps = 31/356 (8%)

Query: 2   HRYR-THSCGDLG--VSDVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           H+Y  TH   D+    S  G+         +  +G V  +R HG   F+DI D     Q+
Sbjct: 24  HKYEITHLIKDIKLLASSQGNKSHEPFMFNISTAGRVANIRRHGKASFVDIFDEGEKLQI 83

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    E+ +     +     G ++    +      + G++ L  +  ++LS A   
Sbjct: 84  YMRVD----ELKEKYDRFFTYVGRGDIIGVRGDLFYT--MKGELSLLVKDYQLLSKAL-- 135

Query: 111 PLPVFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
             P    +  PE  R+ +R++D L  D+  K +  R  II  +R  + ++ FIE  TPI+
Sbjct: 136 IEPPDWSKLSPE-FRYAHRYVDFLYNDSARKAMEIRYMIIREIREFLYSKGFIEVETPIV 194

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   A+ F          +Y L  A + Y +  +  GF++ F+I   FR+ED    
Sbjct: 195 QPVYGGALAKPFKTHVNYLNEDWY-LRIALELYLKRYIIGGFNKVFEIGKVFRNEDIDVT 253

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  L++  ++ + +DI+N  E++L+ V +  +N   V+     I ++   +R   
Sbjct: 254 HNP-EFTLLELYWAYADYNDIMNLTEDLLKSVIKRVTNSTKVAYGKYEIDFEAPFKR--I 310

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
              D  + I+  NV E+    E +   K  ++ P    +      G       D++
Sbjct: 311 SMYDSLSEILGKNV-ENMSDDELKELMKKYNLIPRGNQYVR----GLMIEKLFDKL 361



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 27/155 (17%)

Query: 416 ARNHIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            R  + ++L   ++        +I D+P      E   +   H                 
Sbjct: 349 VRGLMIEKLFDKLVTPTLTNPTFITDYPI-----ETTPLCKPHR---------------- 387

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  ++++   G EIA+     +   +  + F           E          RA 
Sbjct: 388 NKPGLVERFEMFIAGMEIANAYTELNDPILQDKLFREEQEMFRRGDEEAHPYDKDFVRAL 447

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             GMPP GG+  GIDRIVML+    +++EV  FPM
Sbjct: 448 SYGMPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482


>gi|156309317|ref|XP_001617688.1| hypothetical protein NEMVEDRAFT_v1g225882 [Nematostella vectensis]
 gi|156195285|gb|EDO25588.1| predicted protein [Nematostella vectensis]
          Length = 287

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 15/246 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS--EWVLCIDG 75
              V ++G +   R  G   F +++D  G  QV  N D  C    K++ +     L   G
Sbjct: 46  NKQVVIAGRLMSRRIQGKASFAELQDAEGRVQVYFNRDEICLGDDKTLYNEVYKKLLDIG 105

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFKY 128
             +    E     +  G+  +  +   +LS A +       + E           +R++ 
Sbjct: 106 DFVGVEGELFTTKV--GEKSVRVKNFTLLSKALKPLPLPKTDAEGNTFDEFNDPELRYRQ 163

Query: 129 RFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R+ DL  +   K   VKRT++ N+MR       + E  TPIL        AR F+     
Sbjct: 164 RYADLVVNPHVKEVFVKRTKLFNAMREFFNNAGYFEVETPILQPIPGGAAARPFITHHNS 223

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +S+ + 
Sbjct: 224 LDIPLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVSYKDY 281

Query: 247 DDILNT 252
           + +++ 
Sbjct: 282 NWMMDF 287


>gi|113475998|ref|YP_722059.1| lysyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110167046|gb|ABG51586.1| lysyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 522

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 107/250 (42%), Gaps = 7/250 (2%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
            F+++ G +   R  G I F+++ D  G  Q+         +   S +    L   G  +
Sbjct: 63  KFLKVCGRITSKRDSGSIGFINLTDETGKIQLKIEKKLVKGDPGLSFKQVQKLLDVGDFV 122

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
             SAE I      G++ +   K+++LS A       +     PE I  ++R +DL  +  
Sbjct: 123 --SAEGIGCRTNRGELSIQVNKLDVLSKAIIPFPDSYYGVNDPE-ICRRHREMDLAGNAE 179

Query: 139 H-KNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQ 196
             +    R++I+ S+R  +   NF E  TPIL +      AR F+          Y L  
Sbjct: 180 ALQRFRVRSKIMQSIRTYLWDANFYEIETPILQSIYGGAAARPFVTHHNALDVDLY-LRI 238

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + +  +  GF+R F++   FR+E   S   P EF  L++  ++ +  +IL  +E+V
Sbjct: 239 ATELFLKRAICGGFERVFELGRVFRNEGIDSTHNP-EFTSLEVYQAYADYFEILGLVEDV 297

Query: 257 LRGVFEEFSN 266
           +         
Sbjct: 298 ICYSLTNILG 307



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 25/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +++DFP      E   +   H+                       +++L  +G E +
Sbjct: 401 QPTFVIDFPV-----EVSPLAKRHH----------------SKPGFVERFELFIHGTEYS 439

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G    +  +   Q F      +E  ++          +A   GMP  GG+  G+DR+VM
Sbjct: 440 NGFSELNDPQDQRQRFEEQIAQREAGDDEAHPMDEDFIQALSLGMPNCGGMGIGVDRLVM 499

Query: 549 LLLGAKNVREVSLFPMSQN 567
           LL   +++R+V +FP  ++
Sbjct: 500 LLTNTQSIRDVIMFPTMRS 518


>gi|54022067|ref|YP_116309.1| lysyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|54013575|dbj|BAD54945.1| putative lysyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 1061

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 10/256 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      S  G+ VR+ G + R+R +GG++F  +RD     Q+V + +      +   
Sbjct: 607 THTVAAARRSPRGTTVRVCGRLLRIRDYGGVVFALLRDWSDDIQLVIDRERVGAARSAEF 666

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
              + L   G ++  S +   +   +G++ L A    +L      PLP   +       R
Sbjct: 667 GEYFDL---GDLIEVSGQIGRSR--SGELSLLAADWRMLGKCL-HPLPDKWKGLADPEAR 720

Query: 126 FKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
            + R++D+         + KR+ ++ S+R  + +  ++E  TPIL        A  F   
Sbjct: 721 VRQRYVDMAINPETRDVLAKRSAVVRSLRESLNSWGYLEVETPILQQVHGGANATPFTTH 780

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L   G ++ F++   FR+E       P EF  L+   + 
Sbjct: 781 INAYDLDLY-LRIAPELYLKRLCVGGMEKVFELGRTFRNEGVDFSHNP-EFTILEAYEAH 838

Query: 244 VEQDDILNTMENVLRG 259
            +   +++T   +++ 
Sbjct: 839 SDYIRMMHTCRVLIQN 854



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 59/188 (31%), Gaps = 28/188 (14%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
            +      I  R  + +        G P +           + + L  +     E  + +D
Sbjct: 893  SAAVGTEITPRTGVAELRELCDRVGVPYQHGWDEGQIVLEMYEHL--VEARTEEPTFYVD 950

Query: 440  FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
            FP             + +P T                    ++DLV  G E+ +      
Sbjct: 951  FP------------TSVSPLTRAHRS---------TPGVTERWDLVAWGVELGTAYSELT 989

Query: 500  MSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                  +  +   +                 +A +  MPP GG+  G+DRIVML+ G  +
Sbjct: 990  DPVEQRRRLTEQSVLAANGDPEAMELDEDFLQALEHAMPPTGGLGMGVDRIVMLITGR-S 1048

Query: 556  VREVSLFP 563
            +RE   FP
Sbjct: 1049 IRETLPFP 1056


>gi|26553856|ref|NP_757790.1| asparaginyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|38258377|sp|Q8EW03|SYN_MYCPE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|26453863|dbj|BAC44194.1| asparaginyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 453

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 69/363 (19%), Positives = 133/363 (36%), Gaps = 46/363 (12%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           S V+L GWV   R +G I F+   D   I     V  N ++  FE AKS R+   + ++G
Sbjct: 17  SNVKLVGWVRSNRDNGSIGFISFTDGSCIHSIQLVYKNGETNNFEEAKSTRTGSAILVEG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +V+        +       E+      +L  A+E       ++E+          L  R 
Sbjct: 77  VVVE-------SKQPNQSFEIKVTNFILLKQADEDYPLQ--KKEHGAEFLRTIAHLRQRT 127

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +     +  R+ +  ++       NF+  S+PI+T++  EGA +          +F+   
Sbjct: 128 NKYGTIMRLRSELAFAIHNFFHQNNFVWVSSPIITSNDAEGAGENFYVDSKTVKNFFGKN 187

Query: 196 QA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +     Q      A  + R +   P FR E   ++R   EF+ ++ E++F   + ++  
Sbjct: 188 ASLTVSGQMHAEAYAQSYKRVYTFGPTFRAEKSNTNRHVSEFWMVEPEIAFCNLEQLMYL 247

Query: 253 MENVLRGVFEEFSNGNTVSNNFL---------------------RICYDDAIRRYGTDKP 291
           +E  ++ +             FL                     +I Y  AI    +D  
Sbjct: 248 IEEFVKYLIRFILKNCKDEMTFLNKLSNNTLSEKLLNAISHPFEKITYKKAIAILKSDVA 307

Query: 292 DLRNPIIMHNV-------TEHFVHSEFRVFSKILSVNPG---YEVWAIPAKGGGGNRAFC 341
           + +      ++       +EH  +   +VF+K L +       + + +     G     C
Sbjct: 308 NKKVKFENESIYFGMDLNSEHEKYLCEKVFNKPLFIYDYPAEIKAFYMKMNADGTTVGAC 367

Query: 342 DRM 344
           D +
Sbjct: 368 DLL 370



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 69/228 (30%), Gaps = 24/228 (10%)

Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA 403
           + E+ +   +  L      +     ++      K LN ++    ++            +A
Sbjct: 248 IEEFVKYLIRFILKNCKDEMTFLNKLSNNTLSEKLLNAISHPFEKITYKKAIAILKSDVA 307

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ 463
              +KF + +     +   +L       +    + + P + ++            F M  
Sbjct: 308 NKKVKFENES----IYFGMDLN-SEHEKYLCEKVFNKPLFIYD-----YPAEIKAFYMKM 357

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
                              DL+  G  EI  G  R      +++  +   +  E +E   
Sbjct: 358 NAD---------GTTVGACDLLMPGIGEIVGGSERESDYTKLVKKCTKANMKVEDIE--- 405

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                  + G     G   G +R +M +   +NV++   FP S    D
Sbjct: 406 -WYLALRKYGYHKSAGFGLGFERFLMYVTECENVKDTIPFPRSYGSLD 452


>gi|261417017|ref|YP_003250700.1| lysyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261373473|gb|ACX76218.1| lysyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302327834|gb|ADL27035.1| lysine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 501

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 68/338 (20%), Positives = 133/338 (39%), Gaps = 28/338 (8%)

Query: 2   HRY-RTHSCGDLGVSDVG-----SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           H++ RTH    L  +          V  +G V R    G + F+ ++D YG  QVV   D
Sbjct: 30  HKFNRTHDSKVLKENKDALMVTKEPVAFAGRVVRFNRKGKMCFMHLKDRYGRLQVVVARD 89

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E  + V+   +    G+              +G+  + A+K+ +LS A        
Sbjct: 90  EVGEENYEIVKMTDLGDFIGV------NGTMFETQSGEYSVRAEKVTMLSKAVRPLPVAK 143

Query: 116 GERE-----------YPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
            + +                R++ R++D+   D + +  +KR++I+ ++R  +I + FIE
Sbjct: 144 EKVDENGNKVVFNEFADVDTRYRQRYIDMALNDDVKEVFIKRSKIMQAIREYLIEKGFIE 203

Query: 164 CSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
             TP L        AR F         + Y L  AP+ Y +  +  G ++ F+    FR+
Sbjct: 204 VETPTLQPIYGGANARPFTTHHNACDMTLY-LRVAPELYLKRCIIGGMEKVFEFCKNFRN 262

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           E       P EF  L+   ++ + +D++   EN+        +    V+     I +   
Sbjct: 263 EGMDRTHSP-EFTGLEFYEAYADYNDMMVHFENIYERACIAANGTTKVNYQGKEIDFKAP 321

Query: 283 IRRYGTDKPDLRN-PIIMHNVTEHFVHSEFRVFSKILS 319
             RY   +   +   I ++++++  + ++       L 
Sbjct: 322 WPRYSMIEAIEKFGGIKVNDMSDDEIKAKMEELGGHLD 359



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS----EVM 504
           E K+        MP       K +   +    Q++   NG+E+ +     +      E++
Sbjct: 377 EGKLIQPTIIKDMPTESTPLCKKHRTTAGLIEQFEPYANGWELGNAYTELNDPIRQRELL 436

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                     +            A + G+PP GG+  GIDR+VMLL   + +R+V LFP+
Sbjct: 437 EDQVRRGRGGEGETHPMDENFMHAVESGLPPTGGVGFGIDRMVMLLTNQQTIRDVQLFPL 496

Query: 565 SQ 566
            +
Sbjct: 497 MK 498


>gi|115373136|ref|ZP_01460438.1| asparaginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115369892|gb|EAU68825.1| asparaginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 469

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 93/275 (33%), Gaps = 22/275 (8%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            S V + GWV   R    G+ F+++ D      +     ++     K V    +    G 
Sbjct: 20  DSKVEVRGWVRTRRDSKAGVSFINVSDGSCFDPIQVVAPNSLPNYEKEV----LHLTAGC 75

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            +      + +       E+ A++++++   E+        +++      +   L  R +
Sbjct: 76  SVICRGTLVRSQGKGQAYEIQAEEVQVVGFVEDPDTYPIQPKQHTLEFLREVAHLRSRTN 135

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--------- 187
           T       R     ++      E F   +TPI+TAS  EGA      S ++         
Sbjct: 136 TFGAISRVRHSAAQAIHRFFSEEGFFWVNTPIITASDTEGAGQLFRVSTLDAVNPPRTDA 195

Query: 188 -----QGSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+          Q           + +   P FR E+  + R   EF+ ++ 
Sbjct: 196 GKIDWSKDFFGKESYLTVSGQLNVETYCCALSKVYTFGPTFRAENSNTTRHLAEFWMIEP 255

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           E++F + +D     E  L+ VF+           F
Sbjct: 256 EVAFADLNDNATLAERFLKYVFKAVLAECGPDMKF 290



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 68/217 (31%), Gaps = 30/217 (13%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LA  F +      +A  GP  K       + +  R++     +  F   +  +       
Sbjct: 268 LAERFLKYVFKAVLAECGPDMKFFEERQQKGVIERMEKFSDST--FERIEYTEAIDILKK 325

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES---- 468
           A+              +   W  D       E E+ +   H       M           
Sbjct: 326 AKKKF----------DYAPEWGNDL----QTEHERYLTEEHVGRPVVVMNYPEKIKSFYM 371

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
               D  ++ A   D++  G  EI  G  R     V  Q  +  G++       +     
Sbjct: 372 RLNEDGKTVAAM--DVLAPGIGEIIGGSQREERLNVFDQRVAQFGLNP----EHYQWYRD 425

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             + G  PH G   G +R+++ + G +N+R+   FP 
Sbjct: 426 LRRYGTVPHAGFGLGFERLLVYMCGLQNIRDAIPFPR 462


>gi|328946519|gb|EGG40659.1| asparagine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 465

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+           A F+  K +
Sbjct: 32  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 91

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 92  SQETSVYVTGIVKEDERSKF-------GYELDITDIEIIGESNDYPITP---KEHGTDFL 141

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 142 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 201

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 202 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 258

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F R+ YD+AI      
Sbjct: 259 HDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAIDLLQAH 318

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 319 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVVNYPAAIKAFYMKPVPGNPDRVLCA 378

Query: 343 RM 344
            +
Sbjct: 379 DL 380



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 53/140 (37%), Gaps = 26/140 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +++++P             A   F M    G  + +   DLL+ + +         EI
Sbjct: 350 PTFVVNYP------------AAIKAFYMKPVPGNPDRVLCADLLAPEGYG--------EI 389

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R    + ++   + +G+     E          + G  PHGG   GI+R+V  + 
Sbjct: 390 IGGSMREEDYDALVAKMNALGMDTTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFVA 445

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G K++RE   FP   +    
Sbjct: 446 GTKHIREAIPFPRMLHRIKP 465


>gi|194754517|ref|XP_001959541.1| GF12925 [Drosophila ananassae]
 gi|190620839|gb|EDV36363.1| GF12925 [Drosophila ananassae]
          Length = 530

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 69/313 (22%), Positives = 123/313 (39%), Gaps = 31/313 (9%)

Query: 11  DLGVSDVGS-FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEIAKSV 65
           +L    VG   V + G VH  R  G   FL +R      Q +            + A ++
Sbjct: 79  ELRGQ-VGKGLVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGDIISKQMVKFAGNI 137

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--- 122
             E ++ I    ++ +++    +     +ELS ++I ++S A+        +   PE   
Sbjct: 138 PKESIIDIQAKAVAVASKI--ESCTEQSLELSVEQIFVISQAKAQLPLQIEDASRPENAE 195

Query: 123 ----------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                       R   R LDLR             +    R  +  + F E  TP + ++
Sbjct: 196 DDGLNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISA 255

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + EG  +    S     ++ A  Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R   
Sbjct: 256 ASEGGANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLT 313

Query: 233 EFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           EF  LD+EM+F     ++L+T+ N    +F+   +             +   ++Y  D  
Sbjct: 314 EFVGLDLEMAFKYHYHEVLHTIGNTFTAIFKGLRDKYARE-------IESVGQQYKVDAF 366

Query: 292 DLRNPIIMHNVTE 304
               P ++   +E
Sbjct: 367 KFLEPPLILQFSE 379



 Score =  107 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                 + +  YD+   G EI SG  R H  E +++   +
Sbjct: 422 KFPLAIRPFYTMPD--------PNNPVYSNSYDMFMRGEEILSGAQRIHDPEYLIERAKH 473

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI      ++      +F+ G PPH G   G++R+VML LG  N+R+ S+FP       
Sbjct: 474 HGIDT----SKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLT 529

Query: 571 L 571
            
Sbjct: 530 P 530


>gi|284931085|gb|ADC31023.1| lysyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 492

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 65/344 (18%), Positives = 128/344 (37%), Gaps = 28/344 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   S   L    +   + +SG V  +R      F+ I+D Y   Q+  N +    ++
Sbjct: 43  EKYDQFSKEQLAEMQMDKPITVSGRVILIRR----TFILIQDFYSELQLYINKNKQP-DL 97

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K       L   G V+  + + +  N  T ++ L  + ++I+S +     P        
Sbjct: 98  FKYFNDYLDL---GDVVCATGKPMKTN--TNELSLDLESLKIISKSLR-VPPEKFHGIAD 151

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           E IR + R+LDL  +   K     R++II +MR       F+E  TP L A     A   
Sbjct: 152 EEIRSRKRYLDLVYNKESKERFVYRSKIIAAMRQYFNENGFLEVETPFLHAQIGGAAAKP 211

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +         Y L  AP+   + L+   F++ ++I  CFR+E   S   P EF  ++  
Sbjct: 212 FITRYNALDRDYYLRIAPELPLKKLIVGSFEKIYEIGKCFRNEGMDSTHNP-EFTSVETY 270

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +++V+   ++   E +++ + +                   +      +  D   P    
Sbjct: 271 VAYVDYIYMMELTEALIKYIAK---------------TIGISHTNIKNETVDWNKPFKRI 315

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            +TE         F+++  ++   ++          +      +
Sbjct: 316 KMTELVKQETGIDFTQVKKLDEALDLAKKHKVHVKEHEKTIGHI 359



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 11/129 (8%)

Query: 442 FYEWNEEEKKID---FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           F+E   E+K ++     H+P  +    +  L  +D       +++L   G E+A+G    
Sbjct: 363 FFEEFCEKKLVEPTFVTHHPVEISP--LSKLDYSDPR--YTERFELFAFGKELANGFSEL 418

Query: 499 HMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +      Q F      K+               A + G+PP GG+  G+DR+VM+L G  
Sbjct: 419 NDPIDQRQRFEKQLEEKQKGNDEASEMDEDFLEALENGLPPTGGLGIGVDRLVMMLTGTT 478

Query: 555 NVREVSLFP 563
           ++R++  FP
Sbjct: 479 SIRDILFFP 487


>gi|253745047|gb|EET01155.1| Aspartyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 555

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 69/293 (23%), Positives = 117/293 (39%), Gaps = 31/293 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-------------NPDSACFEIAK 63
           +G  + +   +H VR  G   FL +R    I Q                +   A  +   
Sbjct: 94  IGRKIWVRARIHTVRATGKSAFLMLRGKMAILQACCFVPGKAENSTEKIDEYRAMIKYIN 153

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------ 117
           S+  E V+ I G V S  +    A+      EL  ++I  +S A         +      
Sbjct: 154 SLPPESVVEIYGAVSSVDSPIKTASAEHRGYELQLERIYAISRAASQMPLQVDDAMRPDS 213

Query: 118 ---------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                        +  +  YR +DLR       +  R+ I +  R  +    FIE +TP 
Sbjct: 214 VYQAPDSQYVHPGKDTKLDYRVIDLRTPANQAIMRVRSAIAHEFRSFLDNAGFIEINTPK 273

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           + A + EG       +  N  +   L Q+PQ YKQ+ ++SGF R ++I P FR E+  + 
Sbjct: 274 IIAGTSEGGAAVFNVNYFNTKA--CLAQSPQLYKQMCISSGFGRVYEIGPVFRAENSHTH 331

Query: 229 RLPGEFYQLDMEM-SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
           R   EF  LD+EM  +    ++L  + ++++ +F+          + +R  YD
Sbjct: 332 RHLCEFTGLDLEMEIYESYSEVLTLLGDLMKHIFKTVEAKCAKEISVIRAQYD 384



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 65/161 (40%), Gaps = 26/161 (16%)

Query: 413 AADARNHIAQELGIINCNCFEFCW-IMD-FPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             D      + LG +    +   + I+D FP             A   +TMP        
Sbjct: 419 LDDLNTENERALGKLIKEKYNTDFYILDKFPL-----------SARPFYTMPDPQD---- 463

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
                   +  YD+   G EI SG  R H  E++ +      +  E +++       AF+
Sbjct: 464 -----GRYSNSYDMFVRGEEICSGAQRVHNPELLEKQCRERNVDPESLKS----YIDAFK 514

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G  PHGG   G++RIVML+LG +N R+  LFP +Q     
Sbjct: 515 YGCAPHGGAGLGLERIVMLMLGIENCRQTCLFPRTQERLTP 555


>gi|310824351|ref|YP_003956709.1| asparaginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309397423|gb|ADO74882.1| Asparaginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 466

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 93/275 (33%), Gaps = 22/275 (8%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            S V + GWV   R    G+ F+++ D      +     ++     K V    +    G 
Sbjct: 17  DSKVEVRGWVRTRRDSKAGVSFINVSDGSCFDPIQVVAPNSLPNYEKEV----LHLTAGC 72

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            +      + +       E+ A++++++   E+        +++      +   L  R +
Sbjct: 73  SVICRGTLVRSQGKGQAYEIQAEEVQVVGFVEDPDTYPIQPKQHTLEFLREVAHLRSRTN 132

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--------- 187
           T       R     ++      E F   +TPI+TAS  EGA      S ++         
Sbjct: 133 TFGAISRVRHSAAQAIHRFFSEEGFFWVNTPIITASDTEGAGQLFRVSTLDAVNPPRTDA 192

Query: 188 -----QGSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+          Q           + +   P FR E+  + R   EF+ ++ 
Sbjct: 193 GKIDWSKDFFGKESYLTVSGQLNVETYCCALSKVYTFGPTFRAENSNTTRHLAEFWMIEP 252

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           E++F + +D     E  L+ VF+           F
Sbjct: 253 EVAFADLNDNATLAERFLKYVFKAVLAECGPDMKF 287



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 68/217 (31%), Gaps = 30/217 (13%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           LA  F +      +A  GP  K       + +  R++     +  F   +  +       
Sbjct: 265 LAERFLKYVFKAVLAECGPDMKFFEERQQKGVIERMEKFSDST--FERIEYTEAIDILKK 322

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES---- 468
           A+              +   W  D       E E+ +   H       M           
Sbjct: 323 AKKKF----------DYAPEWGNDL----QTEHERYLTEEHVGRPVVVMNYPEKIKSFYM 368

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
               D  ++ A   D++  G  EI  G  R     V  Q  +  G++       +     
Sbjct: 369 RLNEDGKTVAAM--DVLAPGIGEIIGGSQREERLNVFDQRVAQFGLNP----EHYQWYRD 422

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             + G  PH G   G +R+++ + G +N+R+   FP 
Sbjct: 423 LRRYGTVPHAGFGLGFERLLVYMCGLQNIRDAIPFPR 459


>gi|327474921|gb|EGF20326.1| asparagine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 448

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 74/362 (20%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKF-------GYELDITDIEIIGESNDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMKIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD+AI      
Sbjct: 242 HDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRISYDEAIDLLQAH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 302 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTYVVNYPSAIKAFYMKPVPGNPDRVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  + +   DLL+ + +         EI  G +R    + ++   +
Sbjct: 339 YPSAIKAFYMKPVPGNPDRVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMN 390

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+     E          + G  PHGG   GI+R+V  + G K++RE   FP   +  
Sbjct: 391 ELGMDTTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFVAGTKHIREAIPFPRMLHRI 446

Query: 570 DL 571
             
Sbjct: 447 KP 448


>gi|297172546|gb|ADI23516.1| lysyl-tRNA synthetase (class II) [uncultured Gemmatimonadales
           bacterium HF0770_41L09]
          Length = 508

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 66/303 (21%), Positives = 111/303 (36%), Gaps = 30/303 (9%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++G +   R HG   F  + D  G  QV    D    E  + +    +    G+     
Sbjct: 62  SVAGRILSWRDHGKSHFAHVGDAGGSIQVYFKSDLIGDERFEELNLLDLGDWIGV----- 116

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------------PESIRFKYR 129
            E       TG+I + A+   +L+ +         E                   R++ R
Sbjct: 117 -EGSAFRTRTGEITIRAESYTLLTKSLRPLPFGKTEENTETGGRIEHSGFADPETRYRQR 175

Query: 130 FLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           + DL     L      RT+II S+R  + +ENF+E  TP+L       +    V      
Sbjct: 176 YADLAVHPDLRNVFETRTKIIRSLRSFLDSENFLEVETPVLQPLYGGASAKPFVTHHEAL 235

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G    L  A + Y + L+  G DR ++I+  FR+E       P EF  L+   +F + +D
Sbjct: 236 GLTMYLRIADELYLKRLLVGGLDRVYEISKDFRNEGLSRVHNP-EFTMLEWYQAFTDYND 294

Query: 249 ILNTMENVLRGVFEEF---------SNGNTVSNNFLRICYDDAIRR-YGTDKPDLRNPII 298
            +  +E ++  V +E          +   +    F RI    A+    G D   L +  +
Sbjct: 295 QMILVERIVGHVLDEVVSSRELRYGNEMISFEPPFPRIPLVGALSEALGVDVFHLEDEAL 354

Query: 299 MHN 301
              
Sbjct: 355 RER 357



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 62/192 (32%), Gaps = 43/192 (22%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG--IINCNCFEFC 435
           HL           L + D D+                  R  +  +L   ++  +  +  
Sbjct: 348 HLEDEALRERAKALGLDDLDTAG----------------RGKLIDKLFGALVEPDLVQPT 391

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           +++D                 +P  +     E    +        +++L     E+ +G 
Sbjct: 392 FVID-----------------HPKELSPLAKEHRLDS----RLTERFELYVGRVELCNGF 430

Query: 496 IRNHMSEVMLQAFSNV----GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
              +        F           +  +       RA + GMPP GG+  G+DR VM++ 
Sbjct: 431 SELNDPLDQRARFEAQAGLRDAGDDEAQQIDDDYVRALEYGMPPTGGVGLGVDRFVMMIT 490

Query: 552 GAKNVREVSLFP 563
              ++R+V LFP
Sbjct: 491 DQPSIRDVILFP 502


>gi|332376021|gb|AEE63151.1| unknown [Dendroctonus ponderosae]
          Length = 552

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 65/343 (18%), Positives = 132/343 (38%), Gaps = 23/343 (6%)

Query: 19  SFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
             V+L+GWVHR+R  G  ++F+ +RD  G  Q + +        A  +++E  + + G +
Sbjct: 130 KRVKLNGWVHRLRRQGKNLMFITLRDGSGFLQCILSNQLCSTYNALVLQTESTVLLFGTL 189

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                         G  EL     E++ +A           E    ++ + R + +R + 
Sbjct: 190 KQVPEG----KTAPGGHELHVDYWELIGLAPPGGADSLLNEEALPDVQAENRHIMIRGEN 245

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
             K +  R+ ++ + R   +   + E + P +  +  EG           + ++  L Q+
Sbjct: 246 TSKVLRMRSVLLQAFRDHYLDRGYCEVTPPSIVQTQVEGGSTLFKLDYFGEEAY--LTQS 303

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  + S     + IA  FR E  R+ R   E+  ++ E  F+  +D+L+ +E+++
Sbjct: 304 SQLYLETCLPS-MGDVYCIAESFRAEQSRTRRHLAEYTHVEAECPFISFNDLLDRLEDLI 362

Query: 258 RGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             V +                N    +  F+R+ Y DAI  Y  +    +     +   E
Sbjct: 363 CDVVDRVLKSPYGEIVRELNPNFQVPTRPFMRMNYSDAID-YLKEHNITKEDGSFYEFGE 421

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
                  R  +  ++       +    K    ++   D R+ E
Sbjct: 422 DIPEMPERKMTDEINKPIMLCRFPANIKSFYMSKCPEDVRLTE 464



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 20/152 (13%)

Query: 422 QELGIINCNCFEFCWIMDFP-FYEW---NEEEKKIDFAHNP-----FTMPQGGMESLKGN 472
           +E  I   +   + +  D P   E    +E  K I     P     F M +   E ++  
Sbjct: 405 KEHNITKEDGSFYEFGEDIPEMPERKMTDEINKPIMLCRFPANIKSFYMSKC-PEDVRLT 463

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           + + +      L+ N  EI  G +R   SE +L+ +   GI        +       + G
Sbjct: 464 ESVDV------LLPNVGEIVGGSMRIWDSEELLEGYKREGIDPAP----YFWYTDQRKYG 513

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             PHGG   G++R +  LL   ++REV L+P 
Sbjct: 514 TCPHGGYGLGLERFLCWLLNRYHIREVCLYPR 545


>gi|312373653|gb|EFR21355.1| hypothetical protein AND_17160 [Anopheles darlingi]
          Length = 541

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 63/266 (23%), Positives = 106/266 (39%), Gaps = 23/266 (8%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVRSEWVLCIDG 75
            V + G VH  R  G   FL +R        +  V         + + S+  E ++ +  
Sbjct: 98  EVWVRGRVHTSRCKGKQCFLVLRQQSSTVQCLLAVNETVSKQMVKFSGSIPRESIIDLKA 157

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE------------- 122
            V+    E    +     +EL   ++ +LS A+        +   PE             
Sbjct: 158 RVI--PVEQRIESCTEQTLELHVLELFLLSAAKAQLPLQIEDASRPEKSDDPEALKIRVN 215

Query: 123 -SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              R   R LDLR             +    R  + A+ F E  TP + +++ EG  +  
Sbjct: 216 QDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDVLTAKGFTEIHTPKIISAASEGGANVF 275

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
             S     ++ A  Q+PQ YKQ+ +A+ FD+ F +   FR ED  + R   EF  LD+EM
Sbjct: 276 TVSYFKDSAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVGLDLEM 333

Query: 242 SFV-EQDDILNTMENVLRGVFEEFSN 266
           +F     ++L+T+ N    +F+   +
Sbjct: 334 AFKYHYHEVLDTIGNTFTEMFKGLRD 359



 Score =  106 bits (265), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                   +  YD+   G EI SG  R H  + +++    
Sbjct: 433 KFPLAVRPFYTMPD--------PTNPRYSNSYDMFMRGEEILSGAQRIHDPDYLIERAKL 484

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I      ++      AF+ G PPH G   G++R+VML LG  N+R+ S+FP       
Sbjct: 485 HAIDL----SKIAAYIDAFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLT 540

Query: 571 L 571
            
Sbjct: 541 P 541


>gi|227537220|ref|ZP_03967269.1| lysine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242935|gb|EEI92950.1| lysine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 572

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 56/334 (16%), Positives = 126/334 (37%), Gaps = 22/334 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F++++D  G  Q     D  C    K++ +     +  +  
Sbjct: 53  KTVSIAGRMMTRRVMGNASFIELQDSTGRIQAYFKRDDICPGEDKTLYNTVFKKLLDIGD 112

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVF------GEREYPESIRFKYRFLD 132
               +       T  I +  ++  +L+ + +    V        +       R++ R++D
Sbjct: 113 IIGIKGYVFTTQTDAICIHVEQFVVLAKSLKPLPVVKSADGKTFDAVTDPEFRYRQRYVD 172

Query: 133 LRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L  +   ++  VK +++  ++R  +  +  +E  TP+L +      AR F+         
Sbjct: 173 LVVNPQVRDTFVKVSKVKTAIRDFLNEQGALEVDTPVLQSIPGGAAARPFITHHNALDIP 232

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + Y + L+  GFD  ++ +  FR+E       P EF  L+  +++ +   ++
Sbjct: 233 LY-LRIANELYLKRLIVGGFDWVYEFSRNFRNEGMDRTHNP-EFTVLEFYVAYKDYVWMM 290

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
            T E +L  V    +   +V     +I +    +R           I +++  + +   +
Sbjct: 291 ETTEKLLEKVALATNGTTSVQVGENQINFAPPYKR-----------ISIYDSIKEYTGFD 339

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                ++  +    +   IP     G     D +
Sbjct: 340 VSEMDEV-GLREVCKQLHIPTTEAMGKGKLIDEI 372



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +   +    +++L+ NG E+A+     +     L+ F
Sbjct: 378 EGNYIQPTFITDYPKEMSPLTKKHREKAGLVERFELMVNGKEVANAYSELNDPIDQLERF 437

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +     E  ++          R+ + GMPP  GI  GIDR+ ML+    ++++V  FP 
Sbjct: 438 EDQLKLMERGDDEAMFIDYDFVRSLEYGMPPTAGIGIGIDRLAMLMTNQASIQDVLFFPQ 497

Query: 565 SQ 566
            +
Sbjct: 498 MR 499


>gi|217031943|ref|ZP_03437445.1| hypothetical protein HPB128_3g62 [Helicobacter pylori B128]
 gi|298736875|ref|YP_003729405.1| lysyl-tRNA synthetase, class II [Helicobacter pylori B8]
 gi|216946412|gb|EEC25017.1| hypothetical protein HPB128_3g62 [Helicobacter pylori B128]
 gi|298356069|emb|CBI66941.1| lysyl-tRNA synthetase, class II [Helicobacter pylori B8]
          Length = 501

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 65/282 (23%), Positives = 119/282 (42%), Gaps = 19/282 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+   
Sbjct: 59  SIVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDE-FKSLKKH--LEVGDIVL--- 112

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            +       TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K+
Sbjct: 113 VKGFPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKD 171

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           + K R+ I++S+R     + F+E  TP++        AR F+      +   Y L  AP+
Sbjct: 172 VFKKRSLIVSSVRKFFEMKGFLEVETPMMHPIPGGANARPFITYHNALEVERY-LRIAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++   + +   
Sbjct: 231 LYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLIELSKRLFDY 289

Query: 260 VFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           + +          ++     N    I Y DA+   G    D+
Sbjct: 290 LLKTLNLDSKIIYNDMEVDFNQTSVISYLDALETIGGISKDI 331



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   GMPP  G   GIDR+VMLL GAK++++V LFP  +
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMR 489


>gi|308272072|emb|CBX28680.1| Asparaginyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 460

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 65/359 (18%), Positives = 131/359 (36%), Gaps = 52/359 (14%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSAC 58
           M +Y+      L        + ++GWV   R   G  F+++ D   +   Q++A      
Sbjct: 1   MKKYKILFL--LNSKVQLENIVVNGWVRTKRDSSGFSFIEVNDGSCLKNIQIIAENKLGN 58

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +   K + +   + + G +               + E+ A KI+I+S+A +   P+  +R
Sbjct: 59  YIDIKKLSTGSAVTVYGDLAESKGSG-------QKWEVLATKIDIISIASD-SYPLQKKR 110

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R     L  R +        R+ +  ++      + F    TPI+T S  EGA 
Sbjct: 111 HTDEYLR-TIAHLRPRTNKYGAVFRIRSELSFAIHKFFRDKGFKYIHTPIITGSDCEGAG 169

Query: 179 DFLVPSRVNQG-------------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRD 222
           +    + ++Q               F+  P +     Q    ++A      +   P FR 
Sbjct: 170 EMFKVTVMDQEKAINKNGQADDLQDFFGKPASLTVSGQLSAEMLALALGDVYTFGPTFRA 229

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF-------------------EE 263
           E+  + R   EF+ ++ EM F + +D ++  E  ++ +                    +E
Sbjct: 230 ENSNTRRHAAEFWMIEPEMVFCDINDDMDLGEQTIKYLTDYALKECKEDLELFATFVDKE 289

Query: 264 FSNG--NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKIL 318
                 N   ++F R+ Y++A++     K      +        EH  +   + F K +
Sbjct: 290 LLKNLENICLSDFERLPYEEAVKILIKSKEKFEYEVSFGKDLQAEHENYLAAQYFKKPV 348



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 14/116 (12%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSN 510
              +  PF M          +D  ++ A   D++  G  E+  G  R    +V+      
Sbjct: 353 YPKSIKPFYMR-------LNDDDKTVAAM--DILVPGIGELIGGSQREERLDVLELRMEE 403

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+ K      +     + + G  PH G   G +R++ML+ G KN+R+V  FP + 
Sbjct: 404 CGLLK----ENYWWYLDSRRFGTVPHSGFGLGFERLLMLVTGIKNIRDVIPFPRTP 455


>gi|302802616|ref|XP_002983062.1| hypothetical protein SELMODRAFT_117697 [Selaginella moellendorffii]
 gi|300149215|gb|EFJ15871.1| hypothetical protein SELMODRAFT_117697 [Selaginella moellendorffii]
          Length = 521

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 67/286 (23%), Positives = 106/286 (37%), Gaps = 27/286 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKS 64
             +LG    GS V + G VH  R  G + FL +R+     Q V + ++       + A  
Sbjct: 61  ISELGTDLEGSTVLVRGRVHSKRAKGKMAFLVLRETIHTVQCVVSMENVGSKQFVKYASL 120

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA---------EELPLPVF 115
           +  E V+ + G V +           T  +E+   ++  +S +         +       
Sbjct: 121 LSKESVVDVTGNVSNPRNPVSGT---TQPVEIQVTELHCISKSTNELPLLLEDAARSDQD 177

Query: 116 GEREYPE---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
            E+   E           R   R LDLR          ++ I +     + A  F +  T
Sbjct: 178 IEKAAKEGIQYARVLQDTRLNNRVLDLRIPANQAIFTVQSEISSLFHDFLRANKFRQIHT 237

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P L A + EG          N      L Q+PQ +KQ+ +   F R F+I P FR E   
Sbjct: 238 PKLIAGASEGGSAVFKLQYAND-QPACLAQSPQLHKQMAICGDFRRVFEIGPVFRAEKSF 296

Query: 227 SDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVS 271
           + R   EF  LD EM   E   +I++ +  +   VF E +      
Sbjct: 297 THRHLCEFIGLDFEMEIKEHYFEIIDLIGKLFIYVFNELNKNCKKE 342



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 58/159 (36%), Gaps = 20/159 (12%)

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
             D      + LG++    ++     DF          +   A  PF             
Sbjct: 383 LGDLDTETERRLGLLVKERYK----TDFYILH------RYPLAVRPFYTMPAVD------ 426

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D     +  +D+   G EI SG  R H  +++L+      I    +         +F  G
Sbjct: 427 DPK--YSNSFDVFIRGEEIISGAQRVHDKDLLLKRIEECNIDPNAI--GLQNYINSFSYG 482

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            PPHGGI  G++R+ ML     N+R+ SLFP   N    
Sbjct: 483 APPHGGIGVGLERVAMLFCNLDNIRKASLFPRDPNRLAP 521


>gi|312866744|ref|ZP_07726958.1| asparagine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097825|gb|EFQ56055.1| asparagine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 448

 Score =  173 bits (438), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 75  SQETSVFVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGT- 288
            D+ L+  E  ++ + +   +                   ++  F RI YD+AI      
Sbjct: 242 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDEAIDLLQEY 301

Query: 289 ------DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
                 D   L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 302 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVINYPSDIKAFYMKPVPGNPDRVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++    ++G+ +   E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREEDYDALVAKMESLGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
             G K++RE   FP   +    
Sbjct: 427 AAGTKHIREAIPFPRMLHRIKP 448


>gi|292625063|ref|XP_696748.3| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic [Danio rerio]
 gi|220678632|emb|CAX13723.1| novel protein similar to vertebrate asparaginyl-tRNA synthetase
           (NARS) [Danio rerio]
          Length = 556

 Score =  173 bits (438), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/339 (18%), Positives = 122/339 (35%), Gaps = 22/339 (6%)

Query: 19  SFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
             V++ GWVHR+R  G  ++F+ +RD  G  Q V             + +E  + + G V
Sbjct: 134 QRVKVFGWVHRLRRQGKNLLFIVLRDGTGFLQCVLTDKLCQCYNGLVLSTESSVALYGTV 193

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                         G  EL     E++ +A           E    ++   R + +R + 
Sbjct: 194 KPVPEG----KQAPGGHELHCDFWELVGLAPAGGADNLLNEESDVDVQLNNRHMMIRGEN 249

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           + K +  R+ +    R    +  + E + P L  +  EG       +   + ++  L Q+
Sbjct: 250 VSKILKVRSAVTQCFRDHFFSRGYCEITPPTLVQTQVEGGSTLFGLNYFGENAY--LTQS 307

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  +D+LN +E+++
Sbjct: 308 SQLYLETCIP-ALGDTFCIAQSYRAEQSRTRRHLSEYTHIEAECPFMSYEDLLNRLEDLV 366

Query: 258 RGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             V +                +       F R+ Y +AI          ++    +   E
Sbjct: 367 CDVVDRVLKSPAAPLLYDINPDFKPPKRPFKRMNYTEAIDWLKEHNIK-KDDGTFYEFGE 425

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
               +  R+ +  ++       +    K     R   DR
Sbjct: 426 DIPEAPERLMTDSINETILLCRFPAEIKSFYMQRCPEDR 464



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   S+ +L+ +   GI        +       + G  PHGG   G+
Sbjct: 473 LMPNVGEIVGGSMRIWDSDELLEGYKREGIDPTP----YYWYTDQRKFGTCPHGGYGLGL 528

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  LL   ++R+V L+P 
Sbjct: 529 ERFLTWLLNRHHIRDVCLYPR 549


>gi|15611240|ref|NP_222891.1| lysyl-tRNA synthetase [Helicobacter pylori J99]
 gi|11135067|sp|Q9ZMP8|SYK_HELPJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|4154685|gb|AAD05751.1| LYSYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 501

 Score =  173 bits (438), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 58/246 (23%), Positives = 107/246 (43%), Gaps = 11/246 (4%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + G V  +R  G   F+ I D   I Q   + +    E  KS++    L +  +V+   
Sbjct: 59  SVVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDE-FKSLKKH--LEVGDIVL--- 112

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHK 140
            +       TG++ + A +  ILS    +PLP          +R++ R+LDL  +  +  
Sbjct: 113 VKGFPFATKTGELSIHALEFHILSKT-IVPLPEKFHGLSDIELRYRQRYLDLIVNPGVKD 171

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
              KR+ I++S+R     E F+E  TP++        AR F+      +   Y L  AP+
Sbjct: 172 VFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALEIERY-LRIAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++   + +   
Sbjct: 231 LYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLIELSKRLFDY 289

Query: 260 VFEEFS 265
           + +  +
Sbjct: 290 LLKTLN 295



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 4/99 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A    MPP  G   GIDR+VMLL GAK++++V LFP  +
Sbjct: 451 ALAHEMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMR 489


>gi|322498851|emb|CBZ33924.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 648

 Score =  173 bits (438), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 5/262 (1%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SCG+ G    G  V +   + R R  G + FL +R     +           + A+S+  
Sbjct: 131 SCGESGCVREGDEVTVRARLERTRGRGRLAFLHLRQPPLESVQAVCEGKELTKQARSITP 190

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           E ++ + G+V  R A+T   +      EL    + ++S A       + +       R  
Sbjct: 191 ESIVDVTGVV--RRADTPVQSTTCRGWELQVTALHVVSQAAAPLPFPYHDINAKLDTRLN 248

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +R +DLR + +       + +  S R  ++A +FIE  TP L  ++ EG  +        
Sbjct: 249 HRVMDLRTEKMIATSRLVSALGQSFRNELLARDFIEVHTPKLLGAASEGGSNVFRVDYFE 308

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + ++ A  Q+PQ YKQ+++     R F++ P FR E+  + R   EF  LD EM   +  
Sbjct: 309 RKAYLA--QSPQLYKQMMVMGDAMRVFEVGPVFRAENSLTHRHLTEFVGLDGEMVVKDSH 366

Query: 248 -DILNTMENVLRGVFEEFSNGN 268
            ++L+ +E V+  V    +  +
Sbjct: 367 TEVLDVLEPVMCAVLAHLTQQH 388



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 24/152 (15%)

Query: 422 QELG-IINCNCFEFCWIMD-FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + LG +I        +++D FP             +  PF        +  G        
Sbjct: 519 RRLGQLIKERYGVDLYVIDSFP------------SSARPFYTMPVDPSTPDGP------T 560

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+   G EI SG  R H  E++ Q  S   + K  V++       +F+ G  PHGG 
Sbjct: 561 RSYDMYLRGEEICSGAQRVHQIELLEQRLSAKKVDKVSVKD----YVDSFRYGAWPHGGF 616

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             G++RI +  LG  ++R+VSLFP        
Sbjct: 617 GLGLERIALFFLGLDDIRQVSLFPRDPKRISP 648


>gi|322375594|ref|ZP_08050106.1| asparagine--tRNA ligase [Streptococcus sp. C300]
 gi|321279302|gb|EFX56343.1| asparagine--tRNA ligase [Streptococcus sp. C300]
          Length = 447

 Score =  173 bits (438), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 130/362 (35%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             FE  K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFETIKHL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R++    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMITFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|146094294|ref|XP_001467258.1| aspartyl-trna synthetase [Leishmania infantum JPCM5]
 gi|321399397|emb|CBZ08620.1| putative aspartyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 641

 Score =  173 bits (438), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 5/262 (1%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           SCG+ G    G  V +   + R R  G + FL +R     +           + A+S+  
Sbjct: 124 SCGESGCVREGDEVTVRARLERTRGRGRLAFLHLRQPPLESVQAVCEGKELTKQARSITP 183

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           E ++ + G+V  R A+T   +      EL    + ++S A       + +       R  
Sbjct: 184 ESIVDVTGVV--RRADTPVQSTTCRGWELQVTALHVVSQAAAPLPFPYHDINAKLDTRLN 241

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +R +DLR + +       + +  S R  ++A +FIE  TP L  ++ EG  +        
Sbjct: 242 HRVMDLRTEKMIATSRLVSALGQSFRNELLARDFIEVHTPKLLGAASEGGSNVFRVDYFE 301

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + ++ A  Q+PQ YKQ+++     R F++ P FR E+  + R   EF  LD EM   +  
Sbjct: 302 RKAYLA--QSPQLYKQMMVMGDAMRVFEVGPVFRAENSLTHRHLTEFVGLDGEMVVKDSH 359

Query: 248 -DILNTMENVLRGVFEEFSNGN 268
            ++L+ +E V+  V    +  +
Sbjct: 360 TEVLDVLEPVMCAVLAHLTQQH 381



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 24/152 (15%)

Query: 422 QELG-IINCNCFEFCWIMD-FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + LG +I        +++D FP             +  PF        +  G        
Sbjct: 512 RRLGQLIKERYGVDLYVIDSFP------------SSARPFYTMPVDPSTPDGP------T 553

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+   G EI SG  R H  E++ Q  S   + K  V++       +F+ G  PHGG 
Sbjct: 554 RSYDMYLRGEEICSGAQRVHQIELLEQRLSAKKVDKVSVKD----YVDSFRYGAWPHGGF 609

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             G++RI +  LG  ++R+VSLFP        
Sbjct: 610 GLGLERIALFFLGLDDIRQVSLFPRDPKRISP 641


>gi|296271373|ref|YP_003654005.1| lysyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296094160|gb|ADG90112.1| lysyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 499

 Score =  173 bits (438), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/324 (19%), Positives = 122/324 (37%), Gaps = 26/324 (8%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RT +  ++          +  G  V ++G V   R  G + F  IRD  G  QV+ + D 
Sbjct: 39  RTATLAEVREKYGHLEPGAYTGVRVGVTGRVMLSRIGGKLCFATIRDGTGSLQVMLSLDR 98

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E   + + +  L   G  +    E + +    G++ + A++ +I S     PLP   
Sbjct: 99  LGEESLAAWKRDVDL---GDHIGVEGEVVTSR--RGELSVMAERWQITSKCLR-PLPEKH 152

Query: 117 EREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
                   R + R++DL  +    K    R+  + ++R     E ++E  TP+L      
Sbjct: 153 IGLTDPEARVRRRYVDLIVNDEARKMAYIRSATVRAVRDFWHNEGYLEVETPMLQPIHGG 212

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F           Y L  A + Y + L+  G ++ F++   FR+E   +   P EF
Sbjct: 213 AAARPFKTHINAYDMDLY-LRIAIELYLKRLVVGGIEKVFEVNRNFRNEGADATHNP-EF 270

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC----YDDAIRRYGTDK 290
             L+   ++++ +D+    + + +   +       V +    +         I  YG+  
Sbjct: 271 TMLEAYGTYLDYNDMAVLTQRMYQHAVQAALGTTVVVHKGQEVDLGQKEWPKITLYGSVS 330

Query: 291 PDLRNPII----MHNVTEHFVHSE 310
             L   +     +  V +H     
Sbjct: 331 EALGEEVTPETPLEEVRKHADKVG 354



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 63/204 (30%), Gaps = 32/204 (15%)

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E   +   G V++ L    T    +    +  D                      + +E
Sbjct: 318 KEWPKITLYGSVSEALGEEVTPETPLEEVRKHADKVGLRWDPK----WGPGKLVQELFEE 373

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L  +     +  ++ D+P               +P T        L           ++D
Sbjct: 374 L--VEPTLIQPTFVYDYPL------------ETSPLTRQHRDNPLL---------TEKWD 410

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGI 539
           L+  G E+ +            +  +   +                  A + GMPP GG+
Sbjct: 411 LIGFGTELGTAYSELIDPIEQRRRLTEQSLLAAGGDPEAMQLDEDFLEALEYGMPPTGGV 470

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             GIDR++M   G KN+RE  LFP
Sbjct: 471 GVGIDRMIMAFTG-KNIRETILFP 493


>gi|212635434|ref|YP_002311959.1| asparaginyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|212556918|gb|ACJ29372.1| Asparaginyl-tRNA synthetase, class IIb [Shewanella piezotolerans
           WP3]
          Length = 466

 Score =  173 bits (438), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/389 (17%), Positives = 121/389 (31%), Gaps = 58/389 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVL 71
           +GS + + GWV   R    GI FL I D      +      N ++   E+ K      V+
Sbjct: 16  IGSQITVRGWVRSRRDSKAGISFLAIYDGSCFDPIQGVVPNNLENYDNEVLKLTAGCSVI 75

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G V+    +           E+    +E+    E+        + +      +   L
Sbjct: 76  M-TGEVVESPGKGQA-------FEMQVTNVEVAGWVEDPDTYPMAAKRHSIEHLRELAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--- 188
             R + +      R  +  ++      + +I  STP++TAS  EGA +    S ++    
Sbjct: 128 RPRTNIIGAVARVRNCLSQAIHRFYNEQGYIWVSTPLITASDTEGAGEMFRVSTLDLENL 187

Query: 189 -----------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRDDKGAVDYSEDFFGKESFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTSRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ E+++ + DD     E++L+  F+           F                    
Sbjct: 248 WMVEPEVAYADLDDAAKLAEDMLKYCFKAVLAERRDDLEFFAQRVEKTAIDRLEAFVSSD 307

Query: 276 --RICYDDAIRRYGTDKPDLRNPIIM-HNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
             +I Y DAI             +    ++ +EH  +     F   + V    +      
Sbjct: 308 FAQIDYTDAIEILKACGKKFEYDVEWGIDLHSEHERYLAEEHFKAPVVVKNYPKDI---- 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 364 -KAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 6/99 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+    + + +S    +  +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGAQREERLDVLDARLAEMELS----QEDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G  PH G   G +R+V  + G  N+R+V  FP +    
Sbjct: 426 YGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPRAPKSA 464


>gi|110834509|ref|YP_693368.1| lysyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|110647620|emb|CAL17096.1| Lysyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 504

 Score =  173 bits (438), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/293 (21%), Positives = 121/293 (41%), Gaps = 27/293 (9%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           +  +L   ++   V ++G +   R    +    ++D  G  Q+ A  D    ++ K  +S
Sbjct: 61  TKEELEEKNI--QVAVAGRMMLDRKAFKV----LQDMSGRIQIFAPKDET-RDVRKETKS 113

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             +  I G+               G + +   +  +L+ +   PLP   +       R++
Sbjct: 114 WDLGDIIGV------RGTLCKSGKGDLYVMMDEYFLLTKSLR-PLPEKHKGLTDTEARYR 166

Query: 128 YRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R++DL  +   +     R +I+  +R  ++ ++F+E  TP+L        AR F+    
Sbjct: 167 QRYVDLIVNEDTRKTFQIRAKIVAGIRNFLVQKDFVEAETPMLQVIPGGATARPFITHHN 226

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  L+   +F +
Sbjct: 227 SLDMDMY-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNP-EFTMLEFYQAFGD 284

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTD 289
             D++N  E +LR + E       V+           F R+   D+I  +  D
Sbjct: 285 YHDLMNLTEEMLRTLAETVLGSTDVAYQGDVFDFGKPFTRMTVFDSILHFNPD 337



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 60/166 (36%), Gaps = 8/166 (4%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
           D  K           IA  LGI   + +    +     +E   E  ++         P  
Sbjct: 339 DAAKLADIEGA--REIATGLGIPLKDGYGLGKV-QIEIFEKTVE-HRLKDPTFITEYPTE 394

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                +  D       +++    G EIA+G    + +E   + F      K   ++    
Sbjct: 395 VSPLARRMDDNPFVTERFEFFVGGREIANGFSELNDAEDQAERFRQQVEEKAAGDDEAMF 454

Query: 525 LYR----AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                  A + G+PP  G   GIDR+VML   A ++R+V LFP  +
Sbjct: 455 YDEDYVVALEHGLPPTAGEGIGIDRLVMLFTDAPSIRDVILFPHMR 500


>gi|306831775|ref|ZP_07464931.1| asparagine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304425973|gb|EFM29089.1| asparagine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 448

 Score =  173 bits (438), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 76/365 (20%), Positives = 134/365 (36%), Gaps = 47/365 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
              VG  V +  WV      G I FL +RD       V   P+          +  F   
Sbjct: 12  KDHVGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKFGEEEGTEKFNTI 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + I G+V   S             EL    +EI+  +E+ P+     +E+  
Sbjct: 72  KHLNQETSILITGIVKEDSRSKF-------GYELDVTDLEIVGHSEDYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                +R L LR       +  R  II +         FI+  +PIL+ ++ E + +   
Sbjct: 122 DFLMDHRHLWLRSRKQMAIMQVRNAIIYASYEFFDKNGFIKFDSPILSGNAAEDSTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                 G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S
Sbjct: 182 TDYF--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRY 286
           F+  ++ L+  E  ++ + +   +                   ++  F R+ YDDAI   
Sbjct: 239 FLSHEESLDLQEAYVKALIQGVLDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAISLL 298

Query: 287 GTDKPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
              + D       L +     +  E ++ + F V + +++    ++ + +    G   R 
Sbjct: 299 QEHENDEDADYEHLEHGDDFGSPHETWISNYFGVPTFVINYPASFKAFYMKPVPGNPERV 358

Query: 340 FCDRM 344
            C  +
Sbjct: 359 LCADL 363



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 52/142 (36%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVIN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     + + K   E          + G  PH G   GI+R+V  
Sbjct: 371 EIIGGSVREDDYDALVAKMDALEMDKSEYE----FYLDLRKYGSVPHAGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|220929973|ref|YP_002506882.1| asparaginyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|220000301|gb|ACL76902.1| asparaginyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 464

 Score =  173 bits (438), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/373 (16%), Positives = 114/373 (30%), Gaps = 49/373 (13%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
             +G  + + GWV  VR      F+++ D      +    +    +  K +    V    
Sbjct: 15  EYIGKTITVPGWVRTVRDSKTFGFIELNDGTFFKNLQVVFEDGKLDNFKEITKLSV---- 70

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G  +    E +         EL A++I + S           ++ +          L  R
Sbjct: 71  GSSIEVEGELVETPNAKQPFELKAKRILVESFCPADYQLQ--KKRHSFEFLRTISHLRPR 128

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +T       R+    ++        F+   TP++T S  EGA      + ++       
Sbjct: 129 TNTFSAVFRVRSLAAFAIHKFFNERGFVYVHTPLITGSDCEGAGQMFRVTTLDMKNPPRQ 188

Query: 190 ---------SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+    +     Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 189 KEGDIDYSKDFFEKETSLTVSGQLTGEAYALAFKNIYTFGPTFRAENSNTARHAAEFWMI 248

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + E++F +  D +   E +L+ V             F                       
Sbjct: 249 EPEIAFADLKDDMILAEEMLKYVINYVLENAPEEMQFFNSFVDKGLLERLANVVNSDFAH 308

Query: 277 ICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVN---PGYEVWAIPA 331
           I Y +AI     +K     P+       TEH  +   +V+ K + V       + + +  
Sbjct: 309 ITYTEAIEILEKNKDKFEYPVEWGVDLQTEHERYITEQVYKKPVFVTDYPKEIKAFYMRV 368

Query: 332 KGGGGNRAFCDRM 344
                  A  D +
Sbjct: 369 NDDNKTVAAMDLL 381



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 26/139 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P     +E K        F M           D  ++ A   DL+  G  EI
Sbjct: 350 KPVFVTDYP-----KEIK-------AFYMRVND-------DNKTVAAM--DLLVPGVGEI 388

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    + + +    +G++KE  +          + G   H G   G +R +M L 
Sbjct: 389 IGGSQREERLDTLEKRMDEMGLNKEDYQ----WYIDLRKYGGTKHAGFGLGFERAIMYLT 444

Query: 552 GAKNVREVSLFPMSQNFCD 570
           G  N+R+V  FP +   C+
Sbjct: 445 GITNIRDVIPFPRTTGSCE 463


>gi|213852618|ref|ZP_03382150.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 164

 Score =  173 bits (438), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/165 (37%), Positives = 97/165 (58%), Gaps = 3/165 (1%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+   LP+       E 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADS--LPLDANHVNTEE 119

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
            R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPM 164


>gi|332361017|gb|EGJ38821.1| asparagine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 448

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKF-------GYELDITDIEIIGESNDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F R+ YD+AI      
Sbjct: 242 HDESLDLQEAYVKALIQGVLDRAPQTLETLERDVELLKRYIAEPFKRVTYDEAIDLLQAH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 302 ENDEDADYEHLEHGDDFGSPHETWISNYFGVPTFVVNYPAAIKAFYMKPVPGNPDRVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        A   F M    G  + +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPAAIKAFYMKPVPGNPDRVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+     E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREEDYDALVAKMEELGMDTSEYE----FYLDLRKYGTVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|86739134|ref|YP_479534.1| lysyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86565996|gb|ABD09805.1| lysyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 483

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/283 (21%), Positives = 115/283 (40%), Gaps = 17/283 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VRL+G V   R  GG+IF  ++D  G  QV  +      E+ K       +   G  +  
Sbjct: 36  VRLAGRVVLWRRMGGLIFGHLQDRSGRVQVSLSKTDLGAEVVKEWSRAVKI---GDFVGI 92

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           +          G+  ++  ++ +L+      LP   +       R++ R+LDL  +   +
Sbjct: 93  AGSLYTTR--RGERTVAISEMTVLNRTVR-ALPDKWQGLSNVEARYRRRYLDLLVNAESR 149

Query: 141 -NIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAP 198
                R  II  +R  +   +F+E  TPIL  A+S   AR F+         FY L  +P
Sbjct: 150 ERFQTRANIIRRIRRLLDDNDFLEVETPILQEAASGAAARPFITRHNALGEDFY-LRISP 208

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + ++   +DR +++   FR+E   S     EF  L+   ++ +  D +  +  ++ 
Sbjct: 209 ETYLKRIVVGAYDRVYELGRNFRNEGMDSS-HLQEFTMLEWYAAYWDYRDNMAFVRELIL 267

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
            V ++             + Y+     +G D P++     +  
Sbjct: 268 TVLDDVLGTRA-------VTYEGVKLDFGADWPEIDYRAEVER 303



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 8/118 (6%)

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
            H+P  +    +      D  ++    + +V NG EI              Q        
Sbjct: 358 VHHPAELVP--LARRSDTDPTAL--DMFQVVVNGVEIVKAYSELVDPAEQRQRLEEQAAL 413

Query: 515 KEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           +E  ++           A + GMPP  G+  GIDR V LL GA  +R+V LFP  +  
Sbjct: 414 REAGDDETMMLEEDFIEAMEYGMPPMSGLGLGIDRFVALLTGAPTLRDVVLFPTMRGA 471


>gi|323475362|gb|ADX85968.1| lysyl-tRNA synthetase [Sulfolobus islandicus REY15A]
          Length = 492

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 82/356 (23%), Positives = 147/356 (41%), Gaps = 31/356 (8%)

Query: 2   HRYR-THSCGDLG--VSDVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           H+Y  TH   D+    S  G+         +  +G V  +R HG   F+DI D     Q+
Sbjct: 24  HKYEITHLIKDIKLLASSQGNKSHEPFMFNISTAGRVANIRRHGKASFVDIFDEGEKLQI 83

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    E+ +     +     G ++    +      + G++ L  +  ++LS A   
Sbjct: 84  YMRVD----ELKEKYDRFFTYVGRGDIIGVRGDLFYT--MKGELSLLVKDYQLLSKAL-- 135

Query: 111 PLPVFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
             P    +  PE  R+ +R++D L  D   K +  R  II  +R  + ++ FIE  TPI+
Sbjct: 136 IEPPDWSKLSPE-FRYAHRYVDFLYNDNARKAMEIRYMIIREIREFLYSKGFIEVETPIV 194

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   A+ F          +Y L  A + Y +  +  GF++ F+I   FR+ED    
Sbjct: 195 QPVYGGALAKPFKTHVNYLNEDWY-LRIALELYLKRYIIGGFNKVFEIGKVFRNEDIDVT 253

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  L++  ++ + +DI+N  E++L+ V +  +N   V+     I ++   +R   
Sbjct: 254 HNP-EFTLLELYWAYADYNDIMNLTEDLLKSVIKRVTNSTKVAYGKYEIDFEAPFKR--I 310

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
              D  + I+  NV E+    E +   K  ++ P    +      G       D++
Sbjct: 311 SMYDSLSEILGKNV-ENMSDDELKELMKKYNLIPRGNQYVR----GLMIEKLFDKL 361



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 27/155 (17%)

Query: 416 ARNHIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            R  + ++L   ++        +I D+P      E   +   H                 
Sbjct: 349 VRGLMIEKLFDKLVTPTLTNPTFITDYPI-----ETTPLCKPHR---------------- 387

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  ++++   G EIA+     +   +  + F           E          RA 
Sbjct: 388 NKPGLVERFEMFIAGMEIANAYTELNDPILQDKLFREEQEMFRRGDEEAHPYDKDFVRAL 447

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             GMPP GG+  GIDRIVML+    +++EV  FPM
Sbjct: 448 SYGMPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482


>gi|166796902|gb|AAI59315.1| LOC100145238 protein [Xenopus (Silurana) tropicalis]
          Length = 478

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/265 (22%), Positives = 107/265 (40%), Gaps = 21/265 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+L GWV  VR    ++FL I D   +  +    +    ++  SV     + + G+++  
Sbjct: 44  VKLQGWVRSVRAQKEVLFLHINDGSSMENLQIVAEP---DLKNSVSFGSSVEVQGMLVKS 100

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +  N       +EL A+ I I+   + +  P   +  +      ++  L  R  T   
Sbjct: 101 LHKKQN-------VELKAEGIRIIGPCDSVDFPFKLKERHSPEYVRQFPHLRCRTPTFSS 153

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------QGSFY- 192
            +  R+    +++       +    TPI+T++  EGA +       N       + SF+ 
Sbjct: 154 LLRIRSEATAAIQEFFKTNGYTHIHTPIITSNDCEGAGELFKVEAANKSPAAGEESSFFG 213

Query: 193 --ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDI 249
             A      Q    +M+  F R F   P FR E+ +S R   EFY ++ E+SF E  +DI
Sbjct: 214 VPAFLTVSGQLHLEVMSGAFSRVFTFGPTFRAENSQSRRHLAEFYMVEAEISFTESLEDI 273

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNF 274
           +  ME++ +              NF
Sbjct: 274 MQVMESLFKTTTATLLARCPDDINF 298



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 60/166 (36%), Gaps = 31/166 (18%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
            P   C    +   ++ +  G +        +++++P                PF     
Sbjct: 341 KPEWGCDLQTEHEKYLVKHCGEV------PVFVINYPL------------ELKPFYARDN 382

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                   D     A   DL+  G  E+  G +R    +++ Q    +G+     ++ + 
Sbjct: 383 E-------DGPQQTAAAVDLLVPGIGELFGGSLREERPQLLQQRLDRLGL-----KDTYQ 430

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                 Q G  PHGG   G +R +  +LG +N+++V  FP   + C
Sbjct: 431 WYLDLRQFGSVPHGGFGMGFERYLQCILGVENIKDVIPFPRFSHSC 476


>gi|300790538|ref|YP_003770829.1| lysyl-tRNA synthetase, class II [Amycolatopsis mediterranei U32]
 gi|299800052|gb|ADJ50427.1| lysyl-tRNA synthetase, class II [Amycolatopsis mediterranei U32]
          Length = 503

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/272 (21%), Positives = 104/272 (38%), Gaps = 18/272 (6%)

Query: 5   RTHSCGDLGVSDV--------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  ++  +          G  V ++G V  +R  G + F  +R+  G         +
Sbjct: 44  RTHSLAEVRAAHADLPVDTATGEQVGVTGRVMFLRNTGKLCFASLREGDGTELQAMISLA 103

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E A +     V    G  +    E I +    G++ + A    I S A         
Sbjct: 104 KVGEDALAAWKSDVDL--GDHVFVQGEVITSK--RGELSVMADAWRITSKALRPLP--NA 157

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPE 175
            +E  E  R + R++DL      +++V+ R  ++ S+R       F E  TP+L      
Sbjct: 158 HKELAEETRIRQRYVDLIMRPRARDVVRTRAGVVRSLRESFHRRGFTEVETPMLQTLHGG 217

Query: 176 G-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+  S       + L  AP+ Y +  +  G ++ F+I   FR+E   S   P EF
Sbjct: 218 ATARPFVTHSNAFDMELF-LRIAPELYLKRCVVGGIEKVFEINRNFRNEGSDSTHSP-EF 275

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
             L+   ++   D        +++   +   +
Sbjct: 276 AMLEYYEAYATYDTNAVMTRQLIQEAAQTVLD 307



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 67/205 (32%), Gaps = 36/205 (17%)

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E   +     ++  L    T                F     L+           + +EL
Sbjct: 324 EWTTLGMYESLSDSLGEEVTPETPAAK------LLGFAQARGLEVDPKLGH--GKLVEEL 375

Query: 425 G--IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              ++  +     ++ DFP               +P T                  A ++
Sbjct: 376 WEHLVGDHLHAPTFVRDFP------------VETSPLTRQHRS---------RPGVAEKW 414

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGG 538
           DL   GFE+A+G        V  +  +   +     ++          RA + GMPP GG
Sbjct: 415 DLYVRGFELATGYSELVDPVVERERLTEQSLLAAQGDSEAMRLDEDFLRALEYGMPPSGG 474

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  GIDR++M L G   +RE  LFP
Sbjct: 475 VGMGIDRLLMALTGLG-IRETILFP 498


>gi|325690553|gb|EGD32556.1| asparagine--tRNA ligase [Streptococcus sanguinis SK115]
 gi|332367062|gb|EGJ44802.1| asparagine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 448

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 74/362 (20%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVTNKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKF-------GYELDITDIEIIGESNDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   N                   ++  F R  YD+AI      
Sbjct: 242 HDESLDLQEAYVKALIQGVLNRAPQALETLERDVELLKRYIAEPFKRFTYDEAIDLLQAH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 302 ENDEDADYEHLEHGDDFGSPHETWISNYFGVPTFVVNYPAAIKAFYMKPVPGNPDRVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 71/200 (35%), Gaps = 38/200 (19%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  +       + ++   + +D D      GD      F +     I+   G+       
Sbjct: 285 PFKRFTYDEAIDLLQAHENDEDADYEHLEHGD-----DFGSPHETWISNYFGV------- 332

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +++++P             A   F M    G  + +   DLL+ + +         EI
Sbjct: 333 PTFVVNYP------------AAIKAFYMKPVPGNPDRVLCADLLAPEGYG--------EI 372

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R    + ++   +++G+     E          + G  PHGG   GI+R+V  + 
Sbjct: 373 IGGSMREEDYDTLVAKMNDLGMDTSEYE----FYLDLRKYGTVPHGGFGIGIERMVTFVA 428

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G K++RE   FP   +    
Sbjct: 429 GTKHIREAIPFPRMLHRIKP 448


>gi|108562604|ref|YP_626920.1| lysyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123373851|sp|Q1CUX6|SYK_HELPH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|107836377|gb|ABF84246.1| lysyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 501

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/297 (22%), Positives = 120/297 (40%), Gaps = 20/297 (6%)

Query: 8   SCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
              DL    D      + G V  +R  G   F+ + D   I Q   + +    E  KS++
Sbjct: 44  YVKDLEEPKDKEKCESIVGRVKLLRLMGKACFIKVEDESAILQAYVSQNELNDE-FKSLK 102

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L +  +V+    +       TG++ + A +  ILS    +PLP          +R+
Sbjct: 103 KH--LEVGDIVL---VKGFPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRY 156

Query: 127 KYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+LDL  +  +     KR+ I++S+R     E F+E  TP++        AR F+   
Sbjct: 157 RQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYH 216

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              +   Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++ 
Sbjct: 217 NALEVERY-LRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYH 274

Query: 245 EQDDILNTMENVLRGVFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
             +D++   + +   + +          ++     N    I Y DA+   G    D+
Sbjct: 275 TYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVISYLDALETIGGISKDI 331



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   GMPP  G   GIDR+VMLL GAK++++V LFP  +
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMR 489


>gi|307636873|gb|ADN79323.1| lysyl t-rna synthetase:classII [Helicobacter pylori 908]
 gi|325995462|gb|ADZ50867.1| Lysyl-tRNA synthetase (class II) [Helicobacter pylori 2018]
 gi|325997060|gb|ADZ49268.1| Lysyl-tRNA synthetase class II [Helicobacter pylori 2017]
          Length = 501

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 12/261 (4%)

Query: 8   SCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
              DL    D      + G V  +R  G   F+ I D   I Q   + +    E  KS++
Sbjct: 44  YVKDLEEPKDKEKCESVVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDE-FKSLK 102

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L +  +V+    +       TG++ + A +  ILS    +PLP          +R+
Sbjct: 103 KH--LEVGDIVL---VKGFPFATKTGELSVHAIEFYILSKT-IVPLPEKFHGLSDIELRY 156

Query: 127 KYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+LDL  +  +     KR+ I++S+R     E F+E  TP++        AR F+   
Sbjct: 157 RQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYH 216

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              +   Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++ 
Sbjct: 217 NALEIERY-LRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYH 274

Query: 245 EQDDILNTMENVLRGVFEEFS 265
             +D++   + +   + +  +
Sbjct: 275 TYEDLIELSKRLFDYLLKTLN 295



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   GMPP  G   GIDR+VMLL GAK++++V LFP  +
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMR 489


>gi|294626361|ref|ZP_06704963.1| asparaginyl-tRNA synthetase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292599362|gb|EFF43497.1| asparaginyl-tRNA synthetase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 464

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 119/385 (30%), Gaps = 54/385 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V + GWV  +R   G+ F+++ D       QVVAN     F+  K + S   L   G
Sbjct: 17  GGEVTVRGWVRTLRGSAGLAFINVTDGSCFAPIQVVANDTLPNFDEIKRLTSGCSLIAKG 76

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           +++    +  +        E+ A  ++I+   E+        +        +   L  R 
Sbjct: 77  VLVKSQGKGQS-------FEIQASGVDIVGWVEDPLTYPIQPKPMTPEFLREVAHLRPRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +        R  +  ++        F   STPI+T S  EGA      S ++        
Sbjct: 130 NLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMFRVSTLDMVNLPRDA 189

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q           + +   P FR E+  + R   EF+ ++
Sbjct: 190 SGNVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHLAEFWMIE 249

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNFLRI 277
            E++F +  +     E  L+ +F    +                        ++  F +I
Sbjct: 250 PEIAFADLAEDALLAEQFLKYLFRAVLDERGDDLAFLAERVDKNAIAKLEAFINAPFEQI 309

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA++           P+   +   TEH         ++     P             
Sbjct: 310 DYSDAVKLLQNSGKKFDFPVEWGLDLQTEHERW-----LTEEHIGRPVVVTNYPEHIKAF 364

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 365 YMRLNDDGKTVAAMDVLAPGIGEII 389



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 12/152 (7%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKA 479
           ++  +  +F + +++      E E+ +   H                  ++ ND     A
Sbjct: 317 LLQNSGKKFDFPVEWGLDLQTEHERWLTEEHIGRPVVVTNYPEHIKAFYMRLNDDGKTVA 376

Query: 480 FQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              D++  G  EI  G  R    +V+    +  G+ K      +       + G  PH G
Sbjct: 377 -AMDVLAPGIGEIIGGSQREERLDVLDARMAQFGLDK----EHYSWYRDFRRYGSVPHAG 431

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              G +R+V+ + G  N+R+   +P +    +
Sbjct: 432 FGLGFERLVVYVCGLSNIRDAIPYPRAPGSAE 463


>gi|88797977|ref|ZP_01113564.1| lysyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88779174|gb|EAR10362.1| lysyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 510

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/307 (21%), Positives = 129/307 (42%), Gaps = 41/307 (13%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H  GDL             +    V ++G V R    GG  F+ +RD  G  Q     
Sbjct: 48  REHKAGDLQSQYGDLEKEAIVEQNVRVAVAGRVMRR---GGP-FVGVRDVTGSIQFYMPK 103

Query: 55  DSACF-EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIE---ILSVAEEL 110
                 +  K +    ++ + G +              G++ +S + IE   IL+ +   
Sbjct: 104 PLQKESDDWKLLDIGDLVGVTGTLSKSGK---------GELYVSVEAIEDMRILTKSLR- 153

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPIL 169
           PLP        +  +++ R++DL  +   +++   R+++++ +R  + + +F+E  TP+L
Sbjct: 154 PLPDKYHGLADQEAKYRQRYVDLIINDQTRSVFEVRSKVVSGIRNYLSSRDFMEVETPML 213

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   AR F+          Y L  AP+ Y + L+  G +R F+I   +R+E   + 
Sbjct: 214 QVIPGGATARPFITHHNAMDRDLY-LRIAPELYLKRLVVGGLERVFEINRSYRNEGVSTR 272

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICY 279
             P EF  L+   ++ + +D+++  E++LR V ++      +            F R+  
Sbjct: 273 HNP-EFTMLEWYQAYADYNDLMDMTEDMLRTVAKDALGTTEIHYQGRDYDFAQPFERVTM 331

Query: 280 DDAIRRY 286
            DAI ++
Sbjct: 332 FDAILKH 338



 Score = 94.0 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 65/202 (32%), Gaps = 30/202 (14%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           V     + KH   V  E ++ R           I              +  I +E   + 
Sbjct: 329 VTMFDAILKHNPEVTAEQLKDRDAAAAIAKALGINVQD---GWGLGKLQTEIFEE--TVE 383

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              F   +I ++P               +P          +           +++    G
Sbjct: 384 EQLFGPVFITEYP------------AEVSPLARRNDANPDVTD---------RFEFFLGG 422

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EIA+G    +      + F      K+  ++           A + G+PP  G   GID
Sbjct: 423 REIANGFSELNDPIDQAERFQAQVAEKDAGDDEAMFYDADYINALEYGLPPTAGEGIGID 482

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VM L  + ++++V LFP  +
Sbjct: 483 RLVMFLTDSPSIKDVILFPHMK 504


>gi|327461251|gb|EGF07584.1| asparagine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 465

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+           A F+  K +
Sbjct: 32  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 91

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 92  SQETSVYVTGIVKEDERSKF-------GYELDITDIEIIGESNDYPITP---KEHGTDFL 141

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 142 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 201

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 202 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 258

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F R+ YD+AI      
Sbjct: 259 HDESLDLQEAYVKALIQGVLDRAPQALETLERDTELLKRYIAEPFKRVSYDEAIDLLQAH 318

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 319 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVVNYPAAIKAFYMKPVPGNPDRVLCA 378

Query: 343 RM 344
            +
Sbjct: 379 DL 380



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 52/140 (37%), Gaps = 26/140 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +++++P             A   F M    G  + +   DLL+ + +         EI
Sbjct: 350 PTFVVNYP------------AAIKAFYMKPVPGNPDRVLCADLLAPEGYG--------EI 389

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R    + ++     +G+     E          + G  PHGG   GI+R+V  + 
Sbjct: 390 IGGSMREEDYDALVAKMEELGMDTSEYE----FYLDLRKYGSVPHGGFGIGIERMVTFVA 445

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G K++RE   FP   +    
Sbjct: 446 GTKHIREAIPFPRMLHRIKP 465


>gi|195582903|ref|XP_002081265.1| GD10925 [Drosophila simulans]
 gi|194193274|gb|EDX06850.1| GD10925 [Drosophila simulans]
          Length = 531

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/272 (23%), Positives = 111/272 (40%), Gaps = 24/272 (8%)

Query: 17  VGS-FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEIAKSVRSEWVL 71
           VG   V + G VH  R  G   FL +R      Q +            + A ++  E ++
Sbjct: 84  VGKGLVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGDVISKQMVKFAGNIPKESII 143

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--------- 122
            I    ++ S++    +     +ELS ++I ++S A+        +   PE         
Sbjct: 144 DIQAKPVAVSSKI--ESCTEQSLELSVEQIFVISQAKAQLPLQIEDASRPENAEDAEGLN 201

Query: 123 -----SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                  R   R LDLR             +    R  +  + F E  TP + +++ EG 
Sbjct: 202 IRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPKIISAASEGG 261

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +    S     ++ A  Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF  L
Sbjct: 262 ANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGL 319

Query: 238 DMEMSFV-EQDDILNTMENVLRGVFEEFSNGN 268
           D+EM+F     ++L+T+ N    +F+   +  
Sbjct: 320 DLEMAFKYHYHEVLHTIGNTFTSIFKGLRDKY 351



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                 + +  YD+   G EI SG  R H  E +++   +
Sbjct: 423 KFPLAIRPFYTMPD--------PNNPVYSNSYDMFMRGEEILSGAQRIHDPEYLIERAKH 474

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI      ++      +F+ G PPH G   G++R+VML LG  N+R+ S+FP       
Sbjct: 475 HGIDT----SKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLT 530

Query: 571 L 571
            
Sbjct: 531 P 531


>gi|148231213|ref|NP_001086948.1| asparaginyl-tRNA synthetase [Xenopus laevis]
 gi|50414890|gb|AAH77811.1| Nars-prov protein [Xenopus laevis]
          Length = 559

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/352 (18%), Positives = 128/352 (36%), Gaps = 23/352 (6%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKS 64
           T    +L  +  G  V++ GWVHR+R  G  ++F+ +RD  G  Q V +           
Sbjct: 125 TLKIREL-EAYRGQRVKVFGWVHRLRRQGKNLMFIVLRDGTGYLQCVLSDQLCQCYNGLV 183

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           + +E  + + G +              G  EL+    E++ +A           E    +
Sbjct: 184 LSTESTVAVYGTLNLVPDG----KQAPGGHELACDYWELVGLAPAGGADNLLNEESDVDV 239

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           +   R + +R + + K    R+ +I+  R       + E + P L  +  EG        
Sbjct: 240 QLNNRHMMIRGENMSKIFKVRSTVIHCFRNHFFDRGYYEVTPPTLVQTQVEGGSTLFKLD 299

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              + ++  L Q+ Q Y +  + +  D  F IA  +R E  R+ R   E+  ++ E  F+
Sbjct: 300 YFGEEAY--LTQSSQLYLETCIPALGDS-FCIAQSYRAEQSRTRRHLAEYTHIEAECPFM 356

Query: 245 EQDDILNTMENVLRGVFEEFSN-------------GNTVSNNFLRICYDDAIRRYGTDKP 291
             +++L  +E+++  V +                        F R+ Y +AI        
Sbjct: 357 TFENLLERLEDLVCDVVDRVLKSPVASLLYDLHPEFKPPKRPFRRMNYSEAITWLKEHDV 416

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
             ++    +   E    +  R+ +  ++       +    K     R   D+
Sbjct: 417 K-KDDGTYYEFGEDIPEAPERLMTDAINEPILLCRFPAEIKSFYMQRCAEDK 467



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R   SE +L+ +  
Sbjct: 450 RFPAEIKSFYMQRCAEDKRLTESVDV-------LMPNVGEIVGGSMRIWDSEELLEGYKR 502

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 503 EEIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRHHIRDVCLYPRFVQRCK 558

Query: 571 L 571
            
Sbjct: 559 P 559


>gi|145353608|ref|XP_001421099.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581335|gb|ABO99392.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 503

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/357 (20%), Positives = 128/357 (35%), Gaps = 61/357 (17%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKS--VRSE 68
           G S VG  + L GW   VR   G+ F+D+ D   I+ +    N  SA ++   +  V + 
Sbjct: 40  GASRVGEALELRGWARSVRTQKGMAFIDLNDGSAISGMQAVVNEGSAAWDALDAGGVSTG 99

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             L + G +++       A       EL+ ++I+++  A+    P+  +R   E +R   
Sbjct: 100 AALRVKGKLVASPGGKQAA-------ELAVEEIDVIGTADPETYPLQKKRHTLEYLR-SI 151

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-- 186
             L  R +T+      R ++  +         F+  +TPI+TAS  EGA +    + +  
Sbjct: 152 AHLRPRTNTIGAVARVRNQLAYATHTFFQEHGFLYANTPIITASDCEGAGEQFQVTTLVE 211

Query: 187 --------------------NQGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDE 223
                                   F+  P       Q    +MA   +  +   P FR E
Sbjct: 212 ALKNNRPSSDLPKNKDGSIDYSQDFFGKPSYLTVSGQLNGEIMACAVNDIYTFGPTFRAE 271

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-------- 275
           +  + R   EF+ ++ E++F + +D ++  E  L+               F         
Sbjct: 272 NSNTSRHLAEFWMVEPELAFADLNDDMDCAEAYLKYCLNHVLEHCDEDLEFFEKNISKDN 331

Query: 276 --------------RICYDDAIRRYGTDKPDLRNPIIMHN--VTEHFVHSEFRVFSK 316
                         RI Y +A+      K     PI   +   +EH  +    VF  
Sbjct: 332 LRERLRNVASQEFARITYTEAVEHVLNAKKKFEFPIEWGSDLQSEHERYISEEVFKD 388



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+ +    VG+ K      +       + 
Sbjct: 408 NDDNKTVAAMDVLVPRVGELMGGSQREERLDVLERRIEEVGLEK----ESYWWYLDLRRY 463

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G  PH G   G +R+V  + G +N+R+   FP 
Sbjct: 464 GSQPHAGFGLGFERLVQYVTGVENIRDAIPFPR 496


>gi|72390029|ref|XP_845309.1| aspartyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62359273|gb|AAX79715.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70801844|gb|AAZ11750.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
 gi|261328702|emb|CBH11680.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 560

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/288 (23%), Positives = 115/288 (39%), Gaps = 18/288 (6%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRS 67
           L   D    V +   V   R  G + F  +RD  + +  + A  +    E+      +  
Sbjct: 82  LSKDDADRVVTIRARVDTTRKKGKLAFTVLRDGVHSLQAMAAVSEEVPKEMVDFIGQLPC 141

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES---- 123
           E V+ ++G V    A     +     IEL   +I ++S A  +      +    E     
Sbjct: 142 ESVVDVEGTVCI--AAQPITSTSQQDIELRINRIHVVSEALRVLPFTLADASRREDEEGI 199

Query: 124 -----IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                 R   R+LDLR    +     ++R+    R  +I   F+E  +P + A++ EG  
Sbjct: 200 KINFDTRLACRWLDLRSPASNAIFRIQSRVGQYFRQFLIDSEFVEIHSPKIIATASEGGA 259

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +       N+ ++ A  Q+PQ YKQ+ +     R F++ P FR E+  + R   EF  LD
Sbjct: 260 NVFKLGYFNRDAYLA--QSPQLYKQIALQGDLKRVFEVGPVFRAENSNTHRHLTEFVGLD 317

Query: 239 MEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +EM   E   ++L+  E +   +FE  S  N       R    + +  
Sbjct: 318 VEMRINEHYYEVLDLAEELFCHMFERLSGHNAELEAIKRQYPFEPLVW 365



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           +   A  PF TMP    E    +         +D+   G EI+SG  R H + ++LQ   
Sbjct: 452 RFPSAARPFYTMPCPNDERFTNS---------FDMFIRGEEISSGAQRIHDASLLLQRAQ 502

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           ++ +    V +       +F+ G  PHGG   G++R+VML LG  NVR  SLFP      
Sbjct: 503 SLQVDLGPVSD----YVDSFRLGAWPHGGFGVGLERVVMLYLGLHNVRLTSLFPRDPQRV 558

Query: 570 DL 571
             
Sbjct: 559 TP 560


>gi|306829853|ref|ZP_07463040.1| asparagine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304427864|gb|EFM30957.1| asparagine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 447

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDADADYEHLEHGDDFGSPHETWISNYFGVPTFVINYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        A   F M    G  E +   DLL+ + +         
Sbjct: 323 TWISNYFGVPTFVIN-----YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG-------- 369

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ +   E          + G  PHGG   GI+R+V  
Sbjct: 370 EIIGGSMREEDYDALVAKMEELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTF 425

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
             G K++RE   FP   +    
Sbjct: 426 AAGTKHIREAIPFPRMLHRIKP 447


>gi|169832633|ref|YP_001694947.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|168995135|gb|ACA35747.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 447

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNLERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G +E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNLERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|116514020|ref|YP_812926.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|116093335|gb|ABJ58488.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|325125709|gb|ADY85039.1| Asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 432

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 71/324 (21%), Positives = 118/324 (36%), Gaps = 28/324 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   VR+  W+   R  G I+FL +RD     Q V   +      FE AK +R E 
Sbjct: 10  SAKHVDEEVRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              + G +   +             E+    +E++S  E         +E+       +R
Sbjct: 70  SFYLTGTIHEDARSHF-------GYEIQISDLEVVSNNE---GYPITNKEHGIDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R RI  +       E F++   P+L  S+PEG  +       N  
Sbjct: 120 HLWLRSRRPFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEGTTELFHIDYFNHD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y   + A  F + F   P FR E  ++ R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEVGAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           L+  E  L  V  +                +  +   G D   LR P    N T      
Sbjct: 237 LDLQERFLSYVVGQVLEH-----------CEYELSILGRDVDKLR-PAAEGNYTRLSYDD 284

Query: 310 EFRVFSKILSVNPGYEVWAIPAKG 333
             ++  +        + +  P + 
Sbjct: 285 AVKMLQEAGKDFKWGDDFGAPDEA 308



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 22/181 (12%)

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
             +G+       D +K    A         + G  +       +  D PF+  N      
Sbjct: 272 AAEGNYTRLSYDDAVKMLQEAGK-DFKWGDDFGAPDEAFLSEQF--DRPFFIVN-----Y 323

Query: 453 DFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
             A  PF M +      +    D+ + + +         EI  G  R    + +      
Sbjct: 324 PVAIKPFYMKKNPENPLTYLCADVEAPEGYG--------EIMGGSEREADYDTLKAQIEE 375

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G++     + +       + G  PH G   G +R++  +    +VRE   FP   N   
Sbjct: 376 AGLNL----DDYSWYLDLRKYGSVPHSGFGMGFERVIAWICKLDHVREAVPFPRMINRMQ 431

Query: 571 L 571
            
Sbjct: 432 P 432


>gi|111020719|ref|YP_703691.1| lysyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|123046073|sp|Q0SAA3|LYSX_RHOSR RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|110820249|gb|ABG95533.1| lysine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 1114

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 56/255 (21%), Positives = 111/255 (43%), Gaps = 10/255 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+  +   S  G+ VR++G + R+R +GG++F  +RD  G  Q++ +      +  ++ 
Sbjct: 659 SHTVTEAVESPEGTTVRIAGRLLRIRDYGGVVFAVVRDWSGDIQILVDEARVGTDRIRAF 718

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +E+ L   G ++  +     +    G + L A +  +       PLP   +       R
Sbjct: 719 AAEFDL---GDLVEVAGVIGYSR--RGALSLLANEWRMTGKCL-HPLPDKWKGLSDPETR 772

Query: 126 FKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
            + R++DL       + +  R+ ++ S+R  +    F+E  TPIL        A  FL  
Sbjct: 773 VRQRYVDLAINSDARRLLEARSAVVKSLRDSLGGRGFLEVETPILQQVHGGANAAPFLTH 832

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L  +G ++ F+I   FR+E       P EF  L+   + 
Sbjct: 833 INAYNLDLY-LRIAPELYLKRLCVAGMEKVFEIGRVFRNEGVDFKHNP-EFTILEAYEAH 890

Query: 244 VEQDDILNTMENVLR 258
            + + ++     +++
Sbjct: 891 SDYEKMMVLCRELIQ 905



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 59/168 (35%), Gaps = 28/168 (16%)

Query: 406  PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
            P +    A      + + L       +      +FP +  N        + +P T P   
Sbjct: 971  PYQSTWDAGAVAQEMYEHL----VEDY-----TEFPTFYTN-----FPTSMSPLTRPHPT 1016

Query: 466  MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENR 521
            +            A ++DLV  G E+ +               +   +      E     
Sbjct: 1017 IP---------GVAAKWDLVAWGVELGTAYSELTDPVDQRNRLTEQSMLAAGGDEEAMEL 1067

Query: 522  FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                 +A +  MPP GG+  G+DR+VML+ G  ++RE   FP+++   
Sbjct: 1068 DEDFLQALEHAMPPTGGLGMGVDRVVMLITG-GSIRETLAFPLAKPRQ 1114


>gi|332362117|gb|EGJ39919.1| asparagine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 448

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKF-------GYELDITDIEIIGESNDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F R+ YD+AI      
Sbjct: 242 HDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAIDLLQAH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 302 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVVNYPEAIKAFYMKPVPGNPDRVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++   + +G+     E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREEDYDALVAKMNELGMDTSEYE----FYLDLRKYGTVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|227828292|ref|YP_002830072.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|227831050|ref|YP_002832830.1| lysyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229585522|ref|YP_002844024.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238620484|ref|YP_002915310.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|284998545|ref|YP_003420313.1| lysyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|227457498|gb|ACP36185.1| lysyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|227460088|gb|ACP38774.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228020572|gb|ACP55979.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238381554|gb|ACR42642.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|284446441|gb|ADB87943.1| lysyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|323478087|gb|ADX83325.1| lysyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 492

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 82/356 (23%), Positives = 147/356 (41%), Gaps = 31/356 (8%)

Query: 2   HRYR-THSCGDLG--VSDVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           H+Y  TH   D+    S  G+         +  +G V  +R HG   F+DI D     Q+
Sbjct: 24  HKYEITHLIKDIKLLASSQGNKSHEPFMFNISTAGRVANIRRHGKASFVDIFDEGEKLQI 83

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    E+ +     +     G ++    +      + G++ L  +  ++LS A   
Sbjct: 84  YMRVD----ELKEKYDRFFTYVGRGDIIGVRGDLFYT--MKGELSLLVKDYQLLSKAL-- 135

Query: 111 PLPVFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
             P    +  PE  R+ +R++D L  D   K +  R  II  +R  + ++ FIE  TPI+
Sbjct: 136 IEPPDWSKLSPE-FRYAHRYVDFLYNDNARKAMEIRYMIIREIREFLYSKGFIEVETPIV 194

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   A+ F          +Y L  A + Y +  +  GF++ F+I   FR+ED    
Sbjct: 195 QPVYGGALAKPFKTHVNYLNEDWY-LRIALELYLKRYIIGGFNKVFEIGKVFRNEDIDVT 253

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  L++  ++ + +DI+N  E++L+ V +  +N   V+     I ++   +R   
Sbjct: 254 HNP-EFTLLELYWAYADYNDIMNLTEDLLKSVIKRVTNSTKVAYGKYEIDFEAPFKR--I 310

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
              D  + I+  NV E+    E +   K  ++ P    +      G       D++
Sbjct: 311 SMYDSLSEILGKNV-ENMSDDELKELMKKYNLIPRGNQYVR----GLMIEKLFDKL 361



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 27/155 (17%)

Query: 416 ARNHIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            R  + ++L   ++        +I D+P      E   +   H                 
Sbjct: 349 VRGLMIEKLFDKLVTPTLTNPTFITDYPI-----ETTPLCKPHR---------------- 387

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  ++++   G EIA+     +   +  + F           E          RA 
Sbjct: 388 NKPGLVERFEMFIAGMEIANAYTELNDPILQDKLFREEQEMFRRGDEEAHPYDKDFVRAL 447

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             GMPP GG+  GIDRIVML+    +++EV  FPM
Sbjct: 448 SYGMPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482


>gi|118619355|ref|YP_907687.1| lysyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118571465|gb|ABL06216.1| lysyl-tRNA synthetase 1 LysS [Mycobacterium ulcerans Agy99]
          Length = 498

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 110/270 (40%), Gaps = 20/270 (7%)

Query: 5   RTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPD 55
           RTH+  ++  +             V ++G V   R  G + F  ++D  G   Q + + D
Sbjct: 36  RTHTLAEIRATYADLPTDSATEDIVGVAGRVVFARNTGKLCFATLQDGDGTQLQAMISLD 95

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   S+         G V+      I++    G++ + A    +   A+ L     
Sbjct: 96  EVGRE---SLDRWKADVDIGDVVYVHGTVISSR--RGELSVLADSWRM--AAKALRPLPV 148

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL  R    +   +R  +I ++R  +    F+E  TP+L   + 
Sbjct: 149 AHKEMSEESRVRQRYVDLIVRPQAREVARQRIAVIRAVRNALERRGFLEVETPMLQTLAG 208

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  GFDR F++   FR+E   S   P E
Sbjct: 209 GAAARPFVTHSNALDIDLY-LRIAPELFLKRCIVGGFDRVFELNRVFRNEGSDSTHSP-E 266

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++   DD       +++ V +E
Sbjct: 267 FSMLETYQTYGTYDDSALITRELIQEVADE 296



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 50/135 (37%), Gaps = 26/135 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ DFP      E   +   H                  +     ++DL   G E+A
Sbjct: 379 APTFVKDFPV-----ETTPLTRQHR----------------SIPGVTEKWDLYVRGVELA 417

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G    +   V    F++   +    ++           A + GMPP  G   GIDR++M
Sbjct: 418 TGYSELNDPVVQRDRFADQARAAAAGDDEAMQLDEDFLTALEYGMPPCTGTGMGIDRLLM 477

Query: 549 LLLGAKNVREVSLFP 563
            L G  ++RE  LFP
Sbjct: 478 CLTGL-SIRETVLFP 491


>gi|322695409|gb|EFY87218.1| aspartate-tRNA ligase [Metarhizium acridum CQMa 102]
          Length = 913

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/317 (20%), Positives = 129/317 (40%), Gaps = 22/317 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHY-GITQVVANPDSACF 59
           H Y  +   +L    +G+ V     +   R     + FL  RD    +  V++       
Sbjct: 144 HPYELNPIAELDKLPLGTEVNFRARISTQRQLSKNLDFLLFRDQTNTVQGVLSREYLDMV 203

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              + + SE ++ ++G V+    E + +   +G +E+    I +++ A       F   +
Sbjct: 204 RWVQKLNSESLVQVNG-VLKAPPEAVRSATHSG-VEVEVHSIHLVNAA---QGAPFTNYK 258

Query: 120 YPESIRFKY--RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            PE++R +   R LDLR  +       R+ +    R  +  + F+E +TP L  ++ E  
Sbjct: 259 PPETLRNRMTSRILDLRHPSNQALFRIRSMVTRIFRDTLEQQGFVEINTPKLQPAATESG 318

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                 +   + +F A  Q+PQ  KQ  +++ F R +++ P FR E+  + R   E+  L
Sbjct: 319 AAVFKVNYFGRNAFLA--QSPQLAKQSAVSADFGRVYEVGPVFRAENSNTHRHLTEYTGL 376

Query: 238 DMEMSF-VEQDDILNTMENVLRGVF---------EEFSN-GNTVSNNFLRICYDDAIRRY 286
           D+EMS   +  +++  ++  L+ VF         +E      +    +L           
Sbjct: 377 DIEMSIEHDYHEVICIIDEFLKNVFTSVYAMPEVKEVQKRWPSKEFKWLDETLILNFEDG 436

Query: 287 GTDKPDLRNPIIMHNVT 303
                D    + M +++
Sbjct: 437 IQMLRDDGRDVEMEDLS 453



 Score = 85.1 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 15/139 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   +  PF   +                  +D+   G EI SGG R H +  + +    
Sbjct: 477 KFPASARPFYTHKD--------PENPFWTRSFDIFIRGQEICSGGQRIHDAAELRENMQA 528

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF---PMSQN 567
           VGIS++ +E+       AF  G PPH G   G++RIV  +L   +VR  SLF   P S  
Sbjct: 529 VGISEDGMED----YLAAFDLGAPPHAGAGLGLERIVAWMLELGDVRYASLFHRDPKSLP 584

Query: 568 FCDLLMGSPSTVSVEQLRE 586
                +  P   + + LR+
Sbjct: 585 ERAPGLPHPDADTTKPLRD 603


>gi|229579931|ref|YP_002838330.1| lysyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228010646|gb|ACP46408.1| lysyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
          Length = 492

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 82/356 (23%), Positives = 147/356 (41%), Gaps = 31/356 (8%)

Query: 2   HRYR-THSCGDLG--VSDVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           H+Y  TH   D+    S  G+         +  +G V  +R HG   F+DI D     Q+
Sbjct: 24  HKYEITHLIKDIKLLASSQGNKSHEPFMFNISTAGRVANIRRHGKASFVDIFDEGEKLQI 83

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
               D    E+ +     +     G ++    +      + G++ L  +  ++LS A   
Sbjct: 84  YMRVD----ELKEKYDRFFTYVGRGDIIGVRGDLFYT--MKGELSLLVKDYQLLSKAL-- 135

Query: 111 PLPVFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
             P    +  PE  R+ +R++D L  D   K +  R  II  +R  + ++ FIE  TPI+
Sbjct: 136 IEPPDWSKLSPE-FRYAHRYVDFLYNDNARKAMEIRYMIIREIREFLYSKGFIEVETPIV 194

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   A+ F          +Y L  A + Y +  +  GF++ F+I   FR+ED    
Sbjct: 195 QPVYGGALAKPFKTHVNYLNEDWY-LRIALELYLKRYIIGGFNKVFEIGKVFRNEDIDVT 253

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF  L++  ++ + +DI+N  E++L+ V +  +N   V+     I ++   +R   
Sbjct: 254 HNP-EFTLLELYWAYADYNDIMNLTEDLLKSVIKRVTNSTKVAYGKYEIDFEAPFKR--I 310

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
              D  + I+  NV E+    E +   K  ++ P    +      G       D++
Sbjct: 311 SMYDSLSEILGKNV-ENMSDDELKELMKKYNLIPRGNQYVR----GLMIEKLFDKL 361



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 27/155 (17%)

Query: 416 ARNHIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            R  + ++L   ++        +I D+P      E   +   H                 
Sbjct: 349 VRGLMIEKLFDKLVTPTLTNPTFITDYPI-----ETTPLCKPHR---------------- 387

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  ++++   G EIA+     +   +  + F           E          RA 
Sbjct: 388 NKLGLVERFEMFIAGMEIANAYTELNDPILQDKLFREEQEMFRRGDEEAHPYDKDFVRAL 447

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             GMPP GG+  GIDRIVML+    +++EV  FPM
Sbjct: 448 SYGMPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482


>gi|310791929|gb|EFQ27456.1| aspartyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 889

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 70/342 (20%), Positives = 134/342 (39%), Gaps = 13/342 (3%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHY-GITQVVANPDSACFEIAKSV 65
           + G+    D+G+ V     +H  R     + FL  RD    +  V+A+      +  + +
Sbjct: 127 TIGEAVKLDIGTKVTFRARIHTQRNISKHLDFLLFRDQTDTVQGVLAHATPNMVKWVQHL 186

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E ++ + G +     +  +A+     +E+    I +L+ A+  P   +   +   + R
Sbjct: 187 HPESIVQVSGTLKKPVQDVKSAHYH--DVEVDIYSIHLLNPAKAPPFSNYMPPDS-MNFR 243

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R LDLR  +       R  I    R  +    FIE  TP L  ++ E   +    + 
Sbjct: 244 LNNRILDLRHPSNQALFRVRAMITRQFRETLDNSGFIEIQTPKLQPAATESGAEVFKLNY 303

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-V 244
             + +F A  Q+PQ  KQ+ +++ F + ++I P FR E+  + R   E+  LD+EM    
Sbjct: 304 FGRRAFLA--QSPQLAKQMTISADFGKVYEIGPVFRAENSNTHRHLTEYTGLDIEMKIQK 361

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM----- 299
              +I+  ++  L+ +F    +   +     R   DD +    T     R+ + M     
Sbjct: 362 HYHEIIKVLDQTLKNIFAAVHSMPELKIIRERFPSDDLVWLDETPIISFRDGLQMLRDDG 421

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
            +V +  + +   +    L        + I  K     R F 
Sbjct: 422 RDVEDEDLSTPDEIRLGELVKEKYGTDYYILDKFPANARPFY 463



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 58/142 (40%), Gaps = 18/142 (12%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF   +                  +D+   G EI +GG R +  + + +  + 
Sbjct: 454 KFPANARPFYTHKADDP---------FWTNSFDIFVRGQEICTGGQRINDPKELRKNMAE 504

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF---PMSQN 567
            GIS++ +         AF  G PPHGG   G+DR+V LLL   +VR  +LF   P S  
Sbjct: 505 KGISEDDMAE----YLEAFDLGAPPHGGAGLGLDRVVFLLLNLGDVRYGTLFYRDPKSLP 560

Query: 568 FCDLLMGSPSTVSVEQL--REL 587
                +  PS  + +    +EL
Sbjct: 561 SRSFTLPHPSADTTKAWAGKEL 582


>gi|308183983|ref|YP_003928116.1| lysyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308059903|gb|ADO01799.1| lysyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 501

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/282 (23%), Positives = 119/282 (42%), Gaps = 19/282 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + G V  +R  G   F+ + D   I Q   + +    E  KS++    L +  +V+   
Sbjct: 59  SIVGRVKLLRLMGKACFIKVEDESAILQAYVSQNELNDE-FKSLKKH--LEVGDIVL--- 112

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E       TG++ + A +  ILS    +PLP          +R++ R+LDL  +   K+
Sbjct: 113 VEGFPFATKTGELSIHALEFHILSKT-IVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKD 171

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           + K R+ I++S+R     E F+E  TP++        AR F+      +   Y L  AP+
Sbjct: 172 VFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALEVERY-LRIAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++   + +   
Sbjct: 231 LYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLIELSKRLFDY 289

Query: 260 VFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           + +          ++     N    I Y DA+   G    D+
Sbjct: 290 LLKTLNLDSKIIYNDMEVDFNQTSVISYLDALETIGGISKDI 331



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL GAK++++V LFP
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|295096370|emb|CBK85460.1| asparaginyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 466

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/429 (16%), Positives = 145/429 (33%), Gaps = 68/429 (15%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSEWVLC 72
           V   V + GWV   R    GI FL + D      V A  +++     +    + +   + 
Sbjct: 16  VDQEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNDDVLHLTTGCSVI 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G+V++   +  +        E+ A  +E+    E+        + +      +   L 
Sbjct: 76  VTGVVVASPGQGQS-------YEIQATSVEVTGWVEDPDTYPMAAKRHSIEYLREVAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R + +      R  +  ++      + +   STP++TAS  EGA +    S ++  +  
Sbjct: 129 PRTNLIGAVARVRHTLAQALHRFFDEQGYFWVSTPLITASDTEGAGEMFRVSTLDMENLP 188

Query: 193 ALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
             P+    Y +                    A    + +   P FR E+  + R   EF+
Sbjct: 189 RTPEGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            L+ E++F + +D     E +L+ VF+                            VS +F
Sbjct: 249 MLEPEVAFADLNDAAALAEAMLKYVFKAVLEERADDMKFFAERVDNDAIARLERFVSADF 308

Query: 275 LRICYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            ++ Y DA+           NP+    ++ +EH  +   + F   + V    +       
Sbjct: 309 AQVDYTDAVAILEKCGEKFENPVYWGVDLSSEHERYLAEKHFKAPVVVKNYPKDI----- 363

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
                +AF  R+NE        G       +   G    +G   +   +   +A    + 
Sbjct: 364 -----KAFYMRLNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMQEMG 411

Query: 393 MQDGDSCFF 401
           +   D  ++
Sbjct: 412 LNPADYSWY 420



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      +G++       +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMQEMGLNPAD----YSWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|156849133|ref|XP_001647447.1| hypothetical protein Kpol_1018p126 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118133|gb|EDO19589.1| hypothetical protein Kpol_1018p126 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 554

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/319 (19%), Positives = 122/319 (38%), Gaps = 29/319 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +   V++SGW+HR+R +  ++F+ +RD  G  Q V + D A  +    +  E  + + G 
Sbjct: 128 LDQRVKISGWIHRMRSNKKVVFIVLRDGTGYIQTVLSGDLALAQQTLDLTLESTVTLYGT 187

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--REYPESIRFKYRFLDLR 134
           ++S            G +EL     E++ +A      +  +       S+    R L LR
Sbjct: 188 IVSVPEG----KSAPGGVELVVDYYEVVGLAPSGDEAITNKIAEGADPSLLLDQRHLALR 243

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +TL   +  R  ++ ++R   I E+  E + P +  +  EG           + ++  L
Sbjct: 244 GETLSAVMKVRASLLKAIRRVYIEEDITEVTPPCMVQTQVEGGSTLFKLDYYGEEAY--L 301

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y +  +       + I   FR E   + R   E+  ++ E++F++ +D+L  +E
Sbjct: 302 TQSSQLYLETCLP-ALGDVYCIQESFRAEKSHTRRHLSEYTHIEAELAFIDFNDLLQHIE 360

Query: 255 NVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKP------DLR 294
            ++    +                         F+R+ Y DAI              D +
Sbjct: 361 TLIVKSIQYVLEDPIAGPLVKQLNPGFVAPKGPFMRLEYKDAITWLQEHGIKNEEGNDFQ 420

Query: 295 NPIIMHNVTEHFVHSEFRV 313
               +    E  +     V
Sbjct: 421 FGDDIAEAAERKMTDTIGV 439



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+    EI  G +R   +E ++  F+ 
Sbjct: 445 RFPVEIKSFYMKRCSDDPRVTESVDV-------LMPTVGEITGGSMRIESTEELMAGFTR 497

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI  +     +       + G  PHGG   G +RI+  L     VR+ SL+P     C 
Sbjct: 498 EGIDSKA----YYWFIDQRKYGTCPHGGYGLGTERILAWLCDRFTVRDCSLYPRFSGRCK 553

Query: 571 L 571
            
Sbjct: 554 P 554


>gi|324991677|gb|EGC23610.1| asparagine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 448

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKF-------GYELDITDIEIIGESNDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F R+ YD+AI      
Sbjct: 242 HDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAIDLLQAH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 302 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVVNYPAAIKAFYMKPVPGNPDRVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 26/140 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +++++P             A   F M    G  + +   DLL+ + +         EI
Sbjct: 333 PTFVVNYP------------AAIKAFYMKPVPGNPDRVLCADLLAPEGYG--------EI 372

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R    + ++   +++G+     E          + G  PHGG   GI+R+V  + 
Sbjct: 373 IGGSMREEDYDALVAKMNDLGMDTTEYE----FYLDLRKYGSVPHGGFGIGIERMVTFVA 428

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G K++RE   FP   +    
Sbjct: 429 GTKHIREAIPFPRMLHRIKP 448


>gi|307708373|ref|ZP_07644840.1| asparaginyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307615819|gb|EFN95025.1| asparaginyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 447

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F+I K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDIIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|146299679|ref|YP_001194270.1| lysyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|146154097|gb|ABQ04951.1| lysyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 567

 Score =  172 bits (437), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 126/358 (35%), Gaps = 26/358 (7%)

Query: 7   HSCGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           H+   +  + + G  V ++G +  VR  G   F +++D  G  Q+  N D  C    K++
Sbjct: 34  HTSKQIKETFEEGKKVIVAGRLMSVRDQGKACFAELQDSEGRIQLYVNRDVLCEGDDKTL 93

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------ 119
            ++    +  L      E        G   +       LS           + +      
Sbjct: 94  YNQVFKKLTDLGDFIGIEGELFTTQVGAKCIRVTGFTFLSKTLRPLPLPKVDEDGNVHDA 153

Query: 120 -YPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEG 176
                +R++ R++DL     + +  +KRT++  +MR       ++E  TP+L +      
Sbjct: 154 FNDAELRYRMRYVDLTVNPQVKETFIKRTKLFTAMRGYFNDAGYLEVDTPVLQSIPGGAS 213

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y +  A + Y + L+  GF+  ++ +  FR+E       P EF  
Sbjct: 214 ARPFITHHNSLDIPLY-MRIANELYLKRLIVGGFEGVYEFSRNFRNEGMDRTHNP-EFTA 271

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSN---------GNTVSNNFLRICYDDAIRRY- 286
           +++ +++ + + ++   E +L       +                 + R+   D+I+ + 
Sbjct: 272 MEIYVAYKDYNWMMEFAEGLLEHCAIAVNGTSEVTFGEHKINFKAPYARVTMTDSIKHFT 331

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
           G D            + E        V   +       E++    +G      F    
Sbjct: 332 GFDIS----GKTEQELFEAARGMGIEVDETMGKGKLIDEIFGAKCEGNYIQPTFITDY 385



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 24/148 (16%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           P  M     E     DL      +++L+  G EIA+     +      + F +     E 
Sbjct: 386 PKEMSPLCKEHRDNPDL----TERFELMVCGKEIANAYSELNDPIDQRERFEDQMRLSEK 441

Query: 518 VENRFGG-----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC--- 569
            ++   G       RA + GMPP  G+  G+DR++M L    +++EV LFP  +      
Sbjct: 442 GDDEANGIIDEDFLRALEYGMPPTSGMGIGMDRLIMYLTNNASIQEVLLFPQMRPEKKQA 501

Query: 570 ------------DLLMGSPSTVSVEQLR 585
                       DLL  + + + + QL+
Sbjct: 502 QIELSDEEKFIIDLLTKNENRMDLTQLK 529


>gi|300812856|ref|ZP_07093251.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496192|gb|EFK31319.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 432

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 71/329 (21%), Positives = 119/329 (36%), Gaps = 28/329 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   VR+  W+   R  G I+FL +RD     Q V   +      FE AK +R E 
Sbjct: 10  SSKHVDEEVRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              + G +   +             E+    +E++S  E         +E+       +R
Sbjct: 70  SFYLTGTIHEDARSHF-------GYEIQISDLEVVSNNE---GYPITNKEHGIDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R RI  +       E F++   P+L  S+PEG  +       +  
Sbjct: 120 HLWLRSRRPFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEGTTELFHIDYFDHD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y   + A  F + F   P FR E  ++ R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEVGAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           L+  E  L  V  +                +  +   G D   LR P    N T      
Sbjct: 237 LDLQERFLSYVVGQVLEH-----------CEYELSILGRDLDKLR-PAAEGNYTRLSYDY 284

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
             ++  +        + +  P +     R
Sbjct: 285 AVKMLQEAGKDFKWGDDFGAPDEAFLSER 313



 Score = 63.9 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 45/135 (33%), Gaps = 19/135 (14%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           D PF+  N        A  PF M +      +    D+ + + +         EI  G  
Sbjct: 315 DRPFFIVN-----YPVAIKPFYMKKNPENPLTYLCADVEAPEGYG--------EIMGGSE 361

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R    + +       G++     + +       + G  PH G   G +R++  +    +V
Sbjct: 362 READYDTLKAQIEEAGLNL----DDYSWYLDLRKYGSVPHSGFGMGFERVIAWICKLDHV 417

Query: 557 REVSLFPMSQNFCDL 571
           RE   FP   N    
Sbjct: 418 REAVPFPRMINRMQP 432


>gi|296166663|ref|ZP_06849089.1| lysine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897998|gb|EFG77578.1| lysine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 503

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 58/270 (21%), Positives = 112/270 (41%), Gaps = 20/270 (7%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD 55
           RTH+   +                V ++G V   R  G + F  +++  G   QV+ + D
Sbjct: 40  RTHTLAQVRADHPDLPVDTATDDVVGVAGRVIFARNSGKLCFATLQEGDGTSLQVMLSLD 99

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                 A+S+ +       G ++      I++    G++ + A   ++   A+ L     
Sbjct: 100 KVG---AESLDAWKADVDLGDIVYVHGNVISSR--RGELSVLADSWQL--AAKSLRPLPV 152

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL      + +  +R  ++ ++R  +    F+E  TP+L   + 
Sbjct: 153 AHKEMSEEARVRQRYVDLIVRPQARTVARQRIAVVRAIRNALERRGFLEVETPMLQTLAG 212

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  GFD+ F++   FR+E   S   P E
Sbjct: 213 GAAARPFVTHSNALDIDLY-LRIAPELFLKRCVVGGFDKVFEVNRVFRNEGADSTHSP-E 270

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++   DD       +++ V +E
Sbjct: 271 FSMLETYQAYGTYDDSAVVTRELIQEVADE 300



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 50/135 (37%), Gaps = 26/135 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ DFP      E   +   H                  +     ++DL   G E+A
Sbjct: 384 APTFVRDFPV-----ETTPLTRQHR----------------SIPGVTEKWDLYVRGIELA 422

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G    +   V  + F+    +    ++           A + GMPP  G   GIDR++M
Sbjct: 423 TGYSELNDPVVQRERFAAQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLM 482

Query: 549 LLLGAKNVREVSLFP 563
            L G  ++RE  LFP
Sbjct: 483 SLTGL-SIRETVLFP 496


>gi|327463305|gb|EGF09626.1| asparagine--tRNA ligase [Streptococcus sanguinis SK1]
          Length = 448

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKF-------GYELDITDIEIIGESNDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F R+ YD+AI      
Sbjct: 242 HDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAIDLLQAH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 302 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVVNYPAAIKAFYMKPVPGNPDRVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 26/140 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +++++P             A   F M    G  + +   DLL+ + +         EI
Sbjct: 333 PTFVVNYP------------AAIKAFYMKPVPGNPDRVLCADLLAPEGYG--------EI 372

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R    + ++   +++G+     E          + G  PHGG   GI+R+V  + 
Sbjct: 373 IGGSMREEDYDALVAKMNDLGMDTTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFVA 428

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G K++RE   FP   +    
Sbjct: 429 GTKHIREAIPFPRMLHRIKP 448


>gi|289168358|ref|YP_003446627.1| aspartyl/asparaginyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288907925|emb|CBJ22765.1| aspartyl/asparaginyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 447

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|104774004|ref|YP_618984.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|104774115|ref|YP_619095.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116514186|ref|YP_813092.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|1711643|sp|P54262|SYN_LACDA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|1321875|emb|CAA61603.1| asparagine--tRNA ligase [Lactobacillus delbrueckii]
 gi|103423085|emb|CAI97806.1| Asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|103423196|emb|CAI97997.1| Asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116093501|gb|ABJ58654.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 432

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 71/324 (21%), Positives = 118/324 (36%), Gaps = 28/324 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   VR+  W+   R  G I+FL +RD     Q V   +      FE AK +R E 
Sbjct: 10  SSKHVDEEVRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              + G +   +             E+    +E++S  E         +E+       +R
Sbjct: 70  SFYLTGTIHEDARSHF-------GYEIQISDLEVVSNNE---GYPITNKEHGIDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R RI  +       E F++   P+L  S+PEG  +       N  
Sbjct: 120 HLWLRSRRPFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEGTTELFHIDYFNHD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y   + A  F + F   P FR E  ++ R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEVGAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           L+  E  L  V  +                +  +   G D   LR P    N T      
Sbjct: 237 LDLQERFLSYVVGQVLEH-----------CEYELSILGRDVDKLR-PAAEGNYTRLSYDD 284

Query: 310 EFRVFSKILSVNPGYEVWAIPAKG 333
             ++  +        + +  P + 
Sbjct: 285 AVKMLQEAGKDFKWGDDFGAPDEA 308



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 22/181 (12%)

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
             +G+       D +K    A         + G  +       +  D PF+  N      
Sbjct: 272 AAEGNYTRLSYDDAVKMLQEAGK-DFKWGDDFGAPDEAFLSEQF--DRPFFIVN-----Y 323

Query: 453 DFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
             A  PF M +      +    D+ + + +         EI  G  R    + +      
Sbjct: 324 PVAIKPFYMKKNPENPLTYLCADVEAPEGYG--------EIMGGSEREADYDTLKAQIEE 375

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G++     + +       + G  PH G   G +R++  +    +VRE   FP   N   
Sbjct: 376 AGLNL----DDYSWYLDLRKYGSVPHSGFGMGFERVIAWICKLDHVREAVPFPRMINRMQ 431

Query: 571 L 571
            
Sbjct: 432 P 432


>gi|332359710|gb|EGJ37527.1| asparagine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 448

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLVKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKF-------GYELDITDIEIIGESNDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F R+ YD+AI      
Sbjct: 242 HDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAIDLLQAH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 302 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVVNYPAAIKAFYMKPVPGNPDRVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 26/140 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +++++P             A   F M    G  + +   DLL+ + +         EI
Sbjct: 333 PTFVVNYP------------AAIKAFYMKPVPGNPDRVLCADLLAPEGYG--------EI 372

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R    + ++   +++G+     E          + G  PHGG   GI+R+V  + 
Sbjct: 373 IGGSMREEDYDALVAKMNDLGMDTTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFVA 428

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G K++RE   FP   +    
Sbjct: 429 GTKHIREAIPFPRMLHRIKP 448


>gi|269986157|gb|EEZ92470.1| asparaginyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 427

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 76/347 (21%), Positives = 136/347 (39%), Gaps = 35/347 (10%)

Query: 7   HSCGDLGVSD-VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +   D+   +  G  + L+G+++ +R      F  +RD  GI Q V++     FE    +
Sbjct: 3   YYIKDIKKDNFEGKEIELNGFINNIRKGKNNTFFMLRDPTGIIQCVSHSADKNFEEVNKI 62

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G++              G  E+S + I++ S+AE  PL   G ++      
Sbjct: 63  TRESSVNVTGIIKRDER-------AEGGYEISIKDIKVYSIAEPFPLK-KGHKKV---FL 111

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           F  R L LR   +   +  R+ + +S+        F E   P     S EG       + 
Sbjct: 112 FDERHLWLRSPKMTAIMKIRSTVFSSIHEFFSENGFYEIQAPSFVGGSVEGGATLFETNY 171

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            N+ ++  L Q+ Q Y    M +   + + +AP FR E  R+ R   EF+  + EM+F  
Sbjct: 172 FNKKAY--LTQSWQLY-AEAMVNSLWKIYTVAPSFRAEKSRTWRHLTEFWHAEAEMAFKT 228

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS----------------NNFLRICYDDAIRRYGTD 289
            +D ++  E +++ V +     N                     FLR+ Y++ I     +
Sbjct: 229 NEDAIDLEEKLIKYVVKNVLIKNPDELKLLKRDTTMLENVVNKPFLRMKYEEIIDLANKN 288

Query: 290 KPDLRNPIIMHNVTEHFVHS--EFRVFSK--ILSVNPGYEVWAIPAK 332
              L     +    E  + S  +  VFS    + + P Y   A+  K
Sbjct: 289 GLKLEYGADLGADEERVITSKLDVPVFSIDYPIELKPFYHKPAVDGK 335



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 4/76 (5%)

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            R    E +L      G+  +  E          + G  PH G   G+DR+VM +    +
Sbjct: 356 QRVDDKETLLNRLKKDGLDGKDYE----WYIDLRRYGAIPHSGFGVGVDRLVMWICKLPH 411

Query: 556 VREVSLFPMSQNFCDL 571
           +     FP +    + 
Sbjct: 412 IMYAVPFPRTPRRLNP 427


>gi|306824865|ref|ZP_07458209.1| asparagine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304433076|gb|EFM36048.1| asparagine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 447

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             FE  K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFETIKHL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD+AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDEAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|125718192|ref|YP_001035325.1| asparaginyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|166232741|sp|A3CNM0|SYN_STRSV RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|125498109|gb|ABN44775.1| Asparaginyl-tRNA synthetase, putative [Streptococcus sanguinis
           SK36]
          Length = 448

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKF-------GYELDITDIEIIGESNDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F R+ YD+AI      
Sbjct: 242 HDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAIDLLQAH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 302 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVVNYPAAIKAFYMKPVPGNPDRVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 26/140 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +++++P             A   F M    G  + +   DLL+ + +         EI
Sbjct: 333 PTFVVNYP------------AAIKAFYMKPVPGNPDRVLCADLLAPEGYG--------EI 372

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R    + ++   +++G+     E          + G  PHGG   GI+R+V  + 
Sbjct: 373 IGGSMREEDYDALVAKMNDLGMDTTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFVA 428

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G K++RE   FP   +    
Sbjct: 429 GTKHIREAIPFPRMLHRIKP 448


>gi|309389246|gb|ADO77126.1| asparaginyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 463

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/342 (18%), Positives = 121/342 (35%), Gaps = 49/342 (14%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V + GWV   R    I F+++ D   +  +              + +   + + G + 
Sbjct: 21  QDVIVMGWVRTKRVSKNIAFIEMNDGTTLENLQLVILDPDKHPLADINTGASIKVTGYID 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                          +E+ A+ IEI+  A E  +    ++ +      +   L  R +T 
Sbjct: 81  KVEGRE-------QDVEMKAENIEIIGEAPEDFILQ--KKRHSFEFLREIAHLRARTNTF 131

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG--------- 189
                 R+++  ++      E+F    TPI+T+   EGA +    S ++           
Sbjct: 132 GVVNRFRSKMSYAIHNYFYEEDFKYIHTPIITSGDAEGAGEVFKVSTLDLDNPPKTEAGK 191

Query: 190 -----SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 F+          Q +  L+A+     +   P FR E+  + R   EF+ ++ EM
Sbjct: 192 IDYSQDFFGEETGLTVSGQLEAELLATALGDVYTFGPTFRAENSNTSRHASEFWMIEPEM 251

Query: 242 SFVEQDDILNTMENVLRGVFE----------EFSNGNTVSNN-----------FLRICYD 280
           +F   D+++  ME+ ++ +F           +F N                  F RI Y 
Sbjct: 252 AFCNLDEMMTLMEDFIKNLFNFALNEAEEEMDFFNQWIDEGRREMIEEIIQSDFGRITYT 311

Query: 281 DAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
           +AI        D   P+   +   +EH  +   + F K + V
Sbjct: 312 EAIDILENSDHDFEFPVSWGIDLQSEHERYLTEKHFEKPIMV 353



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 4/101 (3%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    LV    EI  G  R    + +      + +       ++      
Sbjct: 365 MRQNDDEKTVAAVDCLVPGVGEIVGGSQREERYDKLKNRMEELDMDL----EKYEWFLDI 420

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            + G  PH G   G +R++M L G +N+R+V  FP +    
Sbjct: 421 RKYGSVPHSGFGLGFERLLMYLSGMQNIRDVISFPRTPGSA 461


>gi|262282871|ref|ZP_06060638.1| asparaginyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262261123|gb|EEY79822.1| asparaginyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 448

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F+  K +
Sbjct: 15  VGKEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  + + P+     +E+     
Sbjct: 75  SQETSVFVTGIVKEDERSKF-------GYELDITDIEVIGESNDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F R+ YD+AI      
Sbjct: 242 HDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAIDLLQAH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  NR  C 
Sbjct: 302 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVVNYPAAIKAFYMKPVPGNPNRVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++   +++G+     E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREEDYDALVAKMNDLGMDTTEYE----FYLDLRKYGTVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|28199814|ref|NP_780128.1| asparaginyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182682566|ref|YP_001830726.1| asparaginyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130160|sp|Q87A82|SYN_XYLFT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|28057935|gb|AAO29777.1| asparaginyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182632676|gb|ACB93452.1| asparaginyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307578846|gb|ADN62815.1| asparaginyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 466

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/389 (17%), Positives = 114/389 (29%), Gaps = 50/389 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    G+ F+ + D      +     +        VR     
Sbjct: 12  GKIQVGSEVTVRGWVRTRRDSKAGLSFVSVSDGSCFAAIQVVTPAHLPNYETEVRK---- 67

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +        +     Q E+ AQ IE++   E+        +++      +   L
Sbjct: 68  LTTGCAVIVIGTLAPSLGQGQQFEIQAQSIEVVGWVEDPETYPIQPKQHSLEFLREVAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--- 188
             R +        R  +  ++        +   +TPI+T S  EGA      S ++    
Sbjct: 128 RPRTNLFGAVARIRHCLSQAVHRFFHENGYYWITTPIITTSDAEGAGQMFRVSTLDLVNL 187

Query: 189 -----------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRTETGGIDFSHDFFGKETFLTVSGQLNVEAYALALSKVYTFGPTFRAENSHTPRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NN 273
           + ++ E++F +  +     E  L+ +F+                              + 
Sbjct: 248 WMIEPEIAFADLAEDARVAEQFLKFLFKTVLEERDDDLAFITERVEKTTISKLEGFINSP 307

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           F RI Y DAI+           P+   +   TEH         ++     P         
Sbjct: 308 FERIEYTDAIKLLERSGKKFDFPVEWGLDLQTEHERW-----LTEKHIGRPVVVTNYPEH 362

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 363 IKAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 65/197 (32%), Gaps = 18/197 (9%)

Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSFAADA------RNHIAQELGIINCNCFEFCWIMDF 440
            +  L+ +D D  F          S           R      + ++  +  +F + +++
Sbjct: 274 FKTVLEERDDDLAFITERVEKTTISKLEGFINSPFERIEYTDAIKLLERSGKKFDFPVEW 333

Query: 441 PFYEWNEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKAFQYDLVCNGF-EIAS 493
                 E E+ +   H                  ++ ND     A   D++  G  EI  
Sbjct: 334 GLDLQTEHERWLTEKHIGRPVVVTNYPEHIKAFYMRLNDDGKTVA-AMDVLAPGIGEIIG 392

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  R    E++    +  G+        +       + G  PH G   G +R+V+ + G 
Sbjct: 393 GSQREERLEMLDIRMAQFGLDP----AHYQWYRDFRRYGSVPHAGFGLGFERLVVYVCGL 448

Query: 554 KNVREVSLFPMSQNFCD 570
            N+R+   +P +    +
Sbjct: 449 SNIRDAIPYPRAPGSAE 465


>gi|317012028|gb|ADU82636.1| lysyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 501

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 122/297 (41%), Gaps = 20/297 (6%)

Query: 8   SCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
              DL    D      + G V  +R  G   F+ + D   I Q   + +    E  KS++
Sbjct: 44  YVKDLEEPKDKEKCESVVGRVKLLRLMGKACFIKVEDESAILQAYVSQNELNDE-FKSLK 102

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               L +  +V+    +       TG++ + A +  ILS    +PLP          +R+
Sbjct: 103 KH--LEVGDIVL---VKGFPFATKTGELSIHALEFHILSKT-IVPLPEKFHGLSDIELRY 156

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPS 184
           + R+LDL  +   K++ K R+ I++S+R     E F+E  TP++        AR F+   
Sbjct: 157 RRRYLDLIVNPSVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYH 216

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              +   Y L  AP+ Y + L+  GF+  F+I   FR+E       P EF  ++   ++ 
Sbjct: 217 NALEVERY-LRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYH 274

Query: 245 EQDDILNTMENVLRGVFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
             +D++   + +   + +          ++     N    I Y DA+   G    D+
Sbjct: 275 TYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVISYLDALETIGGISKDI 331



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL GAK++++V LFP
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|308161459|gb|EFO63904.1| Aspartyl-tRNA synthetase [Giardia lamblia P15]
          Length = 551

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/293 (24%), Positives = 121/293 (41%), Gaps = 31/293 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-------------ANPDSACFEIAK 63
           VG  V +   +H VR  G   FL +R    I Q                +   A  +   
Sbjct: 90  VGHKVWIRARIHTVRATGKSAFLMLRGKMAILQACCFVPGKSEGPAEKVDEYRAMIKYIN 149

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE- 122
           S+  E V+ + G + S  A    A+      EL  +KI  +S A         +   P+ 
Sbjct: 150 SLPPESVVEVYGSLSSVDAPIKTASAEHRDYELQLEKIYAISRAASQMPLQVDDAMRPDS 209

Query: 123 --------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                           +  YR +DLR  T    +  R+ I++  R  +    FIE +TP 
Sbjct: 210 VYQAPDSQYVRPGKDTKQDYRVIDLRTPTNQAIMRVRSAIVHEFRSFLDKAGFIEINTPK 269

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           + A + EG       +  N  +   L Q+PQ YKQ+ ++SGF R +++ P FR E+  + 
Sbjct: 270 IIAGTSEGGAAVFGVNYFNTKA--CLAQSPQLYKQMCISSGFGRVYEVGPVFRAENSHTH 327

Query: 229 RLPGEFYQLDMEM-SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
           R   EF  LD+EM  +    ++L  + ++++ +F+      +   + +R  YD
Sbjct: 328 RHLCEFTGLDLEMEIYESYMEVLTLLGDLMKHIFKTVEARCSKEISIIRTQYD 380



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 59/162 (36%), Gaps = 22/162 (13%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
            S   D      + LG +    +      DF   +      K   +  PF          
Sbjct: 412 ASPLDDLNTENERALGKLVKEKYN----TDFYILD------KYPLSVRPFYTMPD----- 456

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
                 S  +  YD+   G EI SG  R H  E++ +      +              AF
Sbjct: 457 ---PYDSRYSNSYDMFIRGEEICSGAQRVHDPELLEKQCRERNVDP----ESLRSYIDAF 509

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G  PHGG   G++RIVML+LG +N R+  LFP +Q     
Sbjct: 510 KYGCAPHGGAGLGLERIVMLMLGIENCRQTCLFPRTQERLTP 551


>gi|254823223|ref|ZP_05228224.1| lysyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 498

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/270 (21%), Positives = 111/270 (41%), Gaps = 20/270 (7%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPD 55
           RTH+   +  +             V ++G V   R  G + F  +++  G T QV+ + D
Sbjct: 36  RTHTLAQVRAAHPDLPVDTATDDVVGVAGRVIFARNSGKLCFATLQEGDGTTLQVMVSLD 95

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                  +S+ +       G ++      I++    G++ + A    + S +        
Sbjct: 96  KVGR---QSLDAWKADVDLGDIVYVHGNVISSR--RGELSVLADSWRMASKSLRPLP--V 148

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL      + +  +R  +I ++R  +    F+E  TP+L   + 
Sbjct: 149 AHKEMSEEARVRQRYVDLIVRPQARTVARQRIAVIRAIRNALERRGFLEVETPMLQTLAG 208

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  GFDR F++   FR+E   S   P E
Sbjct: 209 GAAARPFITHSNALDIDLY-LRIAPELFLKRCVVGGFDRVFELNRVFRNEGADSTHSP-E 266

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++   DD       +++ V +E
Sbjct: 267 FSMLETYQAYGTYDDSAVVTRELIQEVADE 296



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 50/135 (37%), Gaps = 26/135 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ DFP      E   +   H                  ++    ++DL   G E+A
Sbjct: 380 APTFVRDFPV-----ETTPLTRQHR----------------SIAGVTEKWDLYVRGVELA 418

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G    +   V  + F+    +    ++           A +  MPP  G   GIDR++M
Sbjct: 419 TGYSELNDPVVQRERFAAQARAAAAGDDEAMVLDEDFLAALEYAMPPCTGTGMGIDRLLM 478

Query: 549 LLLGAKNVREVSLFP 563
            L G  ++RE  LFP
Sbjct: 479 TLTGL-SIRETVLFP 492


>gi|291525477|emb|CBK91064.1| asparaginyl-tRNA synthetase [Eubacterium rectale DSM 17629]
          Length = 463

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 114/349 (32%), Gaps = 51/349 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
               V + GWV   R      F+ + D       QVV       ++    +     + + 
Sbjct: 17  ADKEVTIGGWVRSNRNSKNFGFIVVNDGTFFEPIQVVYGNGLDNYDEVGKINVGAAIIVR 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++                E+ A ++ +   A     P+  +R   E +R     L  R
Sbjct: 77  GTLVLTPD-------AKQPFEIQAAEVTVEG-ASTPDYPLQKKRHTFEYLR-TISHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +T       R+    ++       +F+   TP++T S  EGA +    + ++       
Sbjct: 128 TNTFEAVFRVRSLCAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDLNNLPMT 187

Query: 190 ---------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+  P       Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EDGKVDFSKDFFNKPTNLTVSGQLNGETYAMAFKNIYTFGPTFRAENSNTTRHAAEFWMI 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSNNFLR 276
           + E++F + +D +   E++L+ V                            N V N+F R
Sbjct: 248 EPEIAFADLEDDMMLAESMLKYVISYVLENAPEEMAFFNNFVDKGLLDRLRNVVENDFAR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
           + Y +AI             +       TEH  +   +++ + + V   
Sbjct: 308 VTYTEAIDILSKHNDKFDYKVSWGCDLQTEHERYLTEQIYKRPVFVTDY 356



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K        F M        K ND     A    LV    EI 
Sbjct: 349 RPVFVTDYP-----KEIK-------AFYM--------KLNDDGKTVAAVDCLVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + +L   + +G+S    E+ +       + G   H G   G +R VM L G
Sbjct: 389 GGSQREDDYDKLLARINELGLS----EDDYKFYLDLRKYGSARHAGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N C+L
Sbjct: 445 MGNIRDVIPFPRTVNNCEL 463


>gi|119488467|ref|ZP_01621640.1| lysyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119455278|gb|EAW36418.1| lysyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 524

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/248 (24%), Positives = 102/248 (41%), Gaps = 8/248 (3%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK-SVRSEWVLCIDGLVMSR 80
           ++ G +   R  G I F+ + D  G  Q+         E    S      L   G  +  
Sbjct: 66  KVCGRITFKRDSGSIGFIGLTDTSGTIQLKIEKKLVTGEAGGLSFNQIKKLLDTGDFI-- 123

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR-DTLH 139
           SAE I      G++ +  Q++++LS A  +P P          I  ++R L L       
Sbjct: 124 SAEGIGCRTNRGELSVQVQRLDVLSKA-TIPFPDSYYGVNDPEICRRHRELGLVSSPESF 182

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAP 198
                R+RII SMR  +    F E  TP+L A      AR F+          Y L  A 
Sbjct: 183 ATFKLRSRIIKSMRTYLWNAEFDEIETPVLQAIYGGAAARPFITHHNALDIDLY-LRIAT 241

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + +  +  GF+R F+I   FR+E   S   P EF  ++   ++ +  D++  +E+++ 
Sbjct: 242 ELFLKRAVCGGFERVFEIGRVFRNEGIDSTHNP-EFTSVEAYQAYADYFDLMTLVEDLIC 300

Query: 259 GVFEEFSN 266
            V ++   
Sbjct: 301 VVTKDVLG 308



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 25/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           E  +I+DFP  E +   K+           + G               +++L  +G E +
Sbjct: 402 EPTFIIDFPV-EVSPLAKR--------HRSKPGFVE------------RFELFIHGTEYS 440

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G    +      + F      K   +           +A   GMP  GG+  G+DR++M
Sbjct: 441 NGFSELNDPVDQRKRFEEQLAQKNAGDEEAHPMDEDFIQALSLGMPTCGGMGIGVDRVIM 500

Query: 549 LLLGAKNVREVSLFPMSQN 567
           LL   +++R+V +FP  ++
Sbjct: 501 LLTNTQSIRDVIMFPTMRS 519


>gi|145602945|ref|XP_362236.2| hypothetical protein MGG_13783 [Magnaporthe oryzae 70-15]
 gi|145011291|gb|EDJ95947.1| hypothetical protein MGG_13783 [Magnaporthe oryzae 70-15]
          Length = 932

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 71/347 (20%), Positives = 136/347 (39%), Gaps = 16/347 (4%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
              L    VGS +     +H  R     + FL +RD     Q V        + A+ +  
Sbjct: 170 IAQLVTLPVGSEITFRARIHHQRDISKALDFLLLRDQTHSIQGVLQGPPEMVKWAQRLHP 229

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI--R 125
           E ++ I G  +    E + +    G +E+    I +++ A+ L    +   + PES+  R
Sbjct: 230 ESIVQITG-HLQCPREPVRSATHQG-LEVLIDTIHLVAPAKNLSFNNY---QPPESLHPR 284

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R +DLR          R  +  + R  +  ++F+E  TP + A + E   +    + 
Sbjct: 285 LTNRVVDLRHPANQALFRVRAAVTRTFRWTLDQQDFVEIQTPKIMAGATESGAEVFKVNY 344

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-V 244
             + ++ A  Q+PQ  KQ+ +++ F R +++ P FR E+  + R   E+  LD+EM    
Sbjct: 345 FGRSAYLA--QSPQLSKQMAISADFKRVYEVGPVFRAENSNTHRHLTEYTGLDIEMCIDQ 402

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              +I+  ++ VL+ +F        +     R  +      +  + P L  P  +  + E
Sbjct: 403 SHHEIIRMVDRVLKNIFAAVHQMEELKIIRER--WPSEDLVWLEETPILTFPEALQMLRE 460

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
                   +    LS    Y +  +  +    +    D+    AR  
Sbjct: 461 ---DGNEDIEEDDLSTRDEYRLGELVKEKYKTDYFILDKFPTIARPF 504



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 6/109 (5%)

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
           T+ +        +D        +D+   G EI +GG R H  + + Q+ ++ GIS + +E
Sbjct: 499 TIARPFYTHKDDSDPK--WTNSFDIFVRGQEICTGGQRIHKYDELRQSMTDSGISGDGME 556

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
                   AF+ G PPHGG   G++RI+  +L   +VR  + F      
Sbjct: 557 E----YLAAFESGAPPHGGAGLGLERIITFMLQLGDVRNAAPFHRDPKS 601


>gi|183985070|ref|YP_001853361.1| lysyl-tRNA synthetase 1 LysS [Mycobacterium marinum M]
 gi|183178396|gb|ACC43506.1| lysyl-tRNA synthetase 1 LysS [Mycobacterium marinum M]
          Length = 498

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 110/270 (40%), Gaps = 20/270 (7%)

Query: 5   RTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPD 55
           RTH+  ++  +             V ++G V   R  G + F  ++D  G   Q + + D
Sbjct: 36  RTHTLAEIRATYADLPTDSATEDIVGVAGRVVFARNTGKLCFATLQDGDGTQLQAMISLD 95

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   S+         G V+      I++    G++ + A    +   A+ L     
Sbjct: 96  KVGRE---SLDRWKADVDIGDVVYVHGTVISSR--RGELSVLADSWRM--AAKALRPLPV 148

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL  R    +   +R  +I ++R  +    F+E  TP+L   + 
Sbjct: 149 AHKEMSEESRVRQRYVDLIVRPQAREVARQRIAVIRAVRNALERRGFLEVETPMLQTLAG 208

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  GFDR F++   FR+E   S   P E
Sbjct: 209 GAAARPFVTHSNALDIDLY-LRIAPELFLKRCIVGGFDRVFELNRVFRNEGSDSTHSP-E 266

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           F  L+   ++   DD       +++ V +E
Sbjct: 267 FSMLETYQTYGTYDDSALITRELIQEVADE 296



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 50/135 (37%), Gaps = 26/135 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ DFP      E   +   H                  +     ++DL   G E+A
Sbjct: 379 APTFVKDFPV-----ETTPLTRQHR----------------SIPGVTEKWDLYVRGVELA 417

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G    +   V    F++   +    ++           A + GMPP  G   GIDR++M
Sbjct: 418 TGYSELNDPVVQRDRFADQARAAAAGDDEAMQLDEDFLTALEYGMPPCTGTGMGIDRLLM 477

Query: 549 LLLGAKNVREVSLFP 563
            L G  ++RE  LFP
Sbjct: 478 CLTGL-SIRETVLFP 491


>gi|161614759|ref|YP_001588724.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|161364123|gb|ABX67891.1| hypothetical protein SPAB_02511 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 445

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 68/378 (17%), Positives = 123/378 (32%), Gaps = 50/378 (13%)

Query: 24  SGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
            GWV   R    GI FL + D      V A  +++     + V    +    G  +  + 
Sbjct: 2   RGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEEV----LHLTTGCSVVVTG 57

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
           + + +       E+ A K+E+    E+        + +      +   L  R + +    
Sbjct: 58  KVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVA 117

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA----- 197
             R  +  ++      + F   STP++TAS  EGA +    S ++  +     Q      
Sbjct: 118 RVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRNDQGRVDFD 177

Query: 198 ------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                         Q      A    + +   P FR E+  + R   EF+ L+ E++F +
Sbjct: 178 KDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFAD 237

Query: 246 QDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRICYDDAIR 284
            +D     E +L+ VF+                            VS +F ++ Y DA+ 
Sbjct: 238 LEDNARLAEAMLKYVFKAVLEERADDMKFFAERVDKDAIARLERFVSTDFAQVDYTDAVA 297

Query: 285 RYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
                     NP+    ++ +EH  +     F   + V    +            R   D
Sbjct: 298 ILERCGKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEI-----KAFYMRLNED 352

Query: 343 RMNEWARSQGQPGLAYIF 360
                A     PG+  I 
Sbjct: 353 GKTVAAMDVLAPGIGEII 370



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++K      +      
Sbjct: 349 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDL 402

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 403 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 441


>gi|254778896|ref|YP_003057001.1| lysyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254000807|emb|CAX28731.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Helicobacter
           pylori B38]
          Length = 501

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/282 (22%), Positives = 113/282 (40%), Gaps = 19/282 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + G V  +R  G   F+ I D   I Q   + +    E+    +S       G ++   
Sbjct: 59  SIVGRVKLLRLMGKACFIKIEDESAILQAYVSQN----ELNNEFKSLKKHLEVGDIVLVK 114

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHK 140
                    TG++ + A +  ILS    +PLP          +R++ R+LDL  +  +  
Sbjct: 115 G--FPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRYRQRYLDLIVNPGVKD 171

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
              KR+ I++S+R     E F+E  TP++        AR F+      +   Y L  AP+
Sbjct: 172 VFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALEVERY-LRIAPE 230

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+  F+I   FR+E       P EF  ++   ++   +D++   + +   
Sbjct: 231 LYLKRLIVGGFEAVFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLIELSKRLFDY 289

Query: 260 VFEEF--------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           + +          ++     N    I Y DA+   G    D+
Sbjct: 290 LLKTLNLDSKIIYNDMEVDFNQTSVISYLDALETIGGISKDI 331



 Score = 87.8 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 391 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 450

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A   GMPP  G   GIDR+VMLL GAK++++V LFP
Sbjct: 451 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFP 486


>gi|302695385|ref|XP_003037371.1| hypothetical protein SCHCODRAFT_64631 [Schizophyllum commune H4-8]
 gi|300111068|gb|EFJ02469.1| hypothetical protein SCHCODRAFT_64631 [Schizophyllum commune H4-8]
          Length = 544

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 62/269 (23%), Positives = 104/269 (38%), Gaps = 25/269 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-----NPDSACFEIAKSVRSE 68
              VG  V L   VH  R  G ++FL +R      Q V             + A  +  E
Sbjct: 93  EEHVGETVILRARVHTSRGKGNVVFLVLRQRIDTIQAVLTAKPEKVSKPMVKWASGLSDE 152

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE------ 122
            ++ ++G+V +      +  I     E+   KI +++           +    E      
Sbjct: 153 SIVLVEGVVTAVPTPIQSTTIHNA--EIQISKIHLIAGLSATLPFTIDDASRSEAELQAA 210

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R +DLR  T       +  I +  R  + A  F E  +P L   +
Sbjct: 211 DTQYNKVLLDTRLNNRIVDLRTQTNQAIFKLQAAIGSLFRDYLSARGFTEIHSPKLQGQA 270

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            E        S     +F A  Q+PQ  KQ+ +A+ F+R ++I P FR ED  + R   E
Sbjct: 271 TESGASVFKVSYFKGNAFLA--QSPQLAKQMCIAADFERVYEIGPVFRAEDSNTHRHLTE 328

Query: 234 FYQLDMEMSFVEQ-DDILNTMENVLRGVF 261
           F  LD+EM+  E   +++  ++ + + +F
Sbjct: 329 FMGLDLEMTIEEHYHEVMELLDGLFKSIF 357



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 26/164 (15%)

Query: 410 CSFAADARNHIAQELG-IINCNCFEFCWIMD-FPFYEWNEEEKKIDFAHNPFTMPQGGME 467
                D      + LG ++        +I+D FP                 +TMP     
Sbjct: 405 REDLDDINTENEKRLGRLVKAKYDTDYYIIDKFPM-----------ALRPFYTMPDPNDP 453

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           +L         +  YD    G EI SG  R H   +++++    G++ + +++       
Sbjct: 454 TL---------SNSYDFFMRGEEILSGAQRIHDPNLLIESMRAKGVNPDDMKD----YIN 500

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +F+ G PPHGG   G++R++ML L   N+R  SLFP      + 
Sbjct: 501 SFRLGCPPHGGGGIGLERVLMLFLKLNNIRRASLFPRDPKRLEP 544


>gi|224367788|ref|YP_002601951.1| asparaginyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2]
 gi|223690504|gb|ACN13787.1| AsnS [Desulfobacterium autotrophicum HRM2]
          Length = 460

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/356 (18%), Positives = 125/356 (35%), Gaps = 49/356 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEW 69
           LG       V + GWV   R      F+++ D   +   Q++A  D A +   + + +  
Sbjct: 11  LGSKTAMDSVVVKGWVRTKRNAKDFSFMEVNDGSCLKNIQIIAGADLANYPEVERITTGS 70

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G +++   +  +        E+ A+++EI+S++     P+  +R   E +R    
Sbjct: 71  AISVTGPLVASPGKGQS-------WEVQAREVEIISLS-PEDYPLQKKRHTDEFLR-TIA 121

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ- 188
            L  R +        R+ +I ++        F   S P++T S  EGA D    + ++  
Sbjct: 122 HLRPRTNKFGAIFRIRSEVIQAIHMFYRDRGFYCLSAPVITGSDCEGAGDMFRVTSLDPA 181

Query: 189 -----------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q    + A      +   P FR E+  + R   EF
Sbjct: 182 EVARQGRMNFNEDFFGTQANLTVSGQLSAEMFALSLGDVYTFGPTFRAENSNTSRHVAEF 241

Query: 235 YQLDMEMSFVEQDDILN--------TMENVLRGVFEEFSNGNTV-------------SNN 273
           + L+ EM+F + D  ++           +V+    E+ S                     
Sbjct: 242 WMLEPEMAFCDLDGNMDHGEELVKALTRHVMEHCAEDLSLFTKFVDKSLGGMLDTLVEQP 301

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           + R+ YD+ +            P+   M   +EH        F K L +    +  
Sbjct: 302 YERVTYDEGVEILQKSGRKFEFPVDNGMDLQSEHERFLAEEYFKKPLFLTNYPKDI 357



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 52/147 (35%), Gaps = 24/147 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +      +  ++ ++P        K I     PF M Q        ND     A  
Sbjct: 335 HERFLAEEYFKKPLFLTNYP--------KDIK----PFYMRQ--------NDDGRTVAAV 374

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    E+  G  R    + + +    +G+SK            + + G   H G   
Sbjct: 375 DLLVPRIGELIGGSQREERLDHLERRMDEMGLSKADYW----WYLDSRRFGTVSHSGFGM 430

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNF 568
           G +R +ML+ G  N+R+V  FP +   
Sbjct: 431 GFERFLMLITGITNIRDVVPFPRTPGA 457


>gi|238923388|ref|YP_002936904.1| asparaginyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238875063|gb|ACR74770.1| asparaginyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 463

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 114/349 (32%), Gaps = 51/349 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
               V + GWV   R      F+ + D       QVV       ++    +     + + 
Sbjct: 17  ADKEVTIGGWVRSNRNSKNFGFIVVNDGTFFEPIQVVYGNGLDNYDEVGKINVGAAIIVR 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++                E+ A ++ +   A     P+  +R   E +R     L  R
Sbjct: 77  GTLVLTPD-------AKQPFEIQAAEVTVEG-ASTPDYPLQKKRHTFEYLR-TISHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +T       R+    ++       +F+   TP++T S  EGA +    + ++       
Sbjct: 128 TNTFEAVFRVRSLCAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDLNNLPMT 187

Query: 190 ---------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+  P       Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EEGKVDFSKDFFNKPTNLTVSGQLNGETYAMAFKNIYTFGPTFRAENSNTTRHAAEFWMI 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSNNFLR 276
           + E++F + +D +   E++L+ V                            N V N+F R
Sbjct: 248 EPEIAFADLEDDMMLAESMLKYVISYVLENAPEEMAFFNNFVDKGLLDRLRNVVENDFAR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
           + Y +AI             +       TEH  +   +++ + + V   
Sbjct: 308 VTYTEAIDILSKHNDKFDYKVSWGCDLQTEHERYLTEQIYKRPVFVTDY 356



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K        F M        K ND     A    LV    EI 
Sbjct: 349 RPVFVTDYP-----KEIK-------AFYM--------KLNDDGKTVAAVDCLVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + +L   + +G+S    E+ +       + G   H G   G +R VM L G
Sbjct: 389 GGSQREDDYDKLLARINELGLS----EDDYKFYLDLRKYGSARHAGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N C+L
Sbjct: 445 MGNIRDVIPFPRTVNNCEL 463


>gi|291277327|ref|YP_003517099.1| lysyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964521|emb|CBG40374.1| lysyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 502

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 56/273 (20%), Positives = 110/273 (40%), Gaps = 17/273 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA---KSVRSEW 69
              +      ++G V  +R  G   F+DI D     QV  + +    +     K++    
Sbjct: 50  NNKETEQKFSITGRVKLLRMMGKACFIDIEDESANVQVYVSQNDLQEQFLLLKKTLEVGD 109

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G               TG++ L A K ++L+ +  +PLP          +R++ R
Sbjct: 110 FISVYGY---------PFVTKTGELSLHAIKYQLLTKS-IIPLPEKFHGITDIELRYRQR 159

Query: 130 FLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVN 187
           +LDL  +   K   K R++I++++R    ++ F+E  TP+L        AR F+      
Sbjct: 160 YLDLIMNKEVKETFKLRSKIVSAVRRFFESKGFLEVETPMLHPIPGGANARPFITHHNAL 219

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               + L  AP+ Y + L+  GF+  F++   FR+E       P EF  ++   ++    
Sbjct: 220 NVDRF-LRIAPELYLKRLIVGGFEAVFEMNRNFRNEGMDHSHNP-EFTMIEFYWAYKTYK 277

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
           D++   +     + +       +  N   I + 
Sbjct: 278 DLIVLTKEFFTYLLDTLGLPTKIHYNDQEIDFS 310



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 6/117 (5%)

Query: 456 HNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
           H  F        S     ND     A +++L   G EI++G    +      + F     
Sbjct: 373 HPTFITDYPIDISPLARRNDQNPQIADRFELFIGGKEISNGFSELNDPIDQFERFKQQVR 432

Query: 514 SKEVVENRFGGLYR----AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            K+  +     +      A   GMPP  G   GIDR++ML  GAK +++V LFP  +
Sbjct: 433 EKDAGDEEAQYMDEDYVWALGYGMPPTAGQGIGIDRLIMLFTGAKTIKDVILFPAMK 489


>gi|322377029|ref|ZP_08051522.1| asparagine--tRNA ligase [Streptococcus sp. M334]
 gi|321282836|gb|EFX59843.1| asparagine--tRNA ligase [Streptococcus sp. M334]
          Length = 447

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+          +  F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGAEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDVEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|325687642|gb|EGD29663.1| asparagine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 448

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKF-------GYELDITDIEIIGESNDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F R+ YD+AI      
Sbjct: 242 HDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAIDLLQAH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 302 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVVNYPAAIKAFYMKPVEGNPDRVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 55/140 (39%), Gaps = 26/140 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMP--QGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +++++P             A   F M   +G  + +   DLL+ + +         EI
Sbjct: 333 PTFVVNYP------------AAIKAFYMKPVEGNPDRVLCADLLAPEGYG--------EI 372

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R    + ++   +++G+     E          + G  PHGG   GI+R+V  + 
Sbjct: 373 IGGSMREEDYDALVAKMNDLGMDTTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFVA 428

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G K++RE   FP   +    
Sbjct: 429 GTKHIREAIPFPRMLHRIKP 448


>gi|1495654|emb|CAA61604.1| asparagine--tRNA ligase [Lactobacillus delbrueckii]
 gi|325125875|gb|ADY85205.1| Asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 432

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 71/324 (21%), Positives = 118/324 (36%), Gaps = 28/324 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   VR+  W+   R  G I+FL +RD     Q V   +      FE AK +R E 
Sbjct: 10  SSKHVDEEVRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              + G +   +             E+    +E++S  E         +E+       +R
Sbjct: 70  SFYLTGTIHEDARSHF-------GYEIQISDLEVVSNNE---GYPITNKEHGIDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R RI  +       E F++   P+L  S+PEG  +       N  
Sbjct: 120 HLWLRSRRPFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEGTTELFHIDYFNHD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y   + A  F + F   P FR E  ++ R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEVGAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           L+  E  L  V  +                +  +   G D   LR P    N T      
Sbjct: 237 LDLQERFLSYVVGQVLEH-----------CEYELSILGRDLDKLR-PAAEGNYTRLSYDD 284

Query: 310 EFRVFSKILSVNPGYEVWAIPAKG 333
             ++  +        + +  P + 
Sbjct: 285 AVKMLQEAGKDFKWGDDFGAPDEA 308



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 22/181 (12%)

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
             +G+       D +K    A         + G  +       +  D PF+  N      
Sbjct: 272 AAEGNYTRLSYDDAVKMLQEAGK-DFKWGDDFGAPDEAFLSEQF--DRPFFIVN-----Y 323

Query: 453 DFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
             A  PF M +      +    D+ + + +         EI  G  R    + +      
Sbjct: 324 PVAIKPFYMKKNPENPLTYLCADVEAPEGYG--------EIMGGSEREADYDTLKAQIEE 375

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G++     + +       + G  PH G   G +R++  +    +VRE   FP   N   
Sbjct: 376 AGLNL----DDYSWYLDLRKYGSVPHSGFGMGFERVIAWICKLDHVREAVPFPRMINRMQ 431

Query: 571 L 571
            
Sbjct: 432 P 432


>gi|15839152|ref|NP_299840.1| asparaginyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|20139947|sp|Q9PAF5|SYN_XYLFA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|9107777|gb|AAF85360.1|AE004064_2 asparaginyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 466

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/389 (17%), Positives = 115/389 (29%), Gaps = 50/389 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    G+ F+ + D      +     +        VR     
Sbjct: 12  GKIQVGSEVTVRGWVRTRRDSKAGLSFVSVSDGSCFAAIQVVTPAHLPNYETEVRK---- 67

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +        +     Q E+ AQ IE++   E+        +++      +   L
Sbjct: 68  LTTGCAVIVIGTLAPSLGQGQQFEIQAQSIEVVGWVEDPETYPIQPKQHSLEFLREVAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--- 188
             R +        R  +  ++        +   +TPI+T S  EGA      S ++    
Sbjct: 128 RPRTNLFGAVARIRHCLSQAVHRFFHENGYYWITTPIITTSDAEGAGQMFRVSTLDLVNL 187

Query: 189 -----------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRTETGGIDFSHDFFGKETFLTVSGQLNVEAYALALSKVYTFGPTFRAENSHTPRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNN 273
           + ++ E++F +  +     E  L+ +F+                            + + 
Sbjct: 248 WMIEPEIAFADLAEDARVAEQFLKFLFKTVLEERTDDLAFITERVEKTTISKLEGFIKSP 307

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           F RI Y DAI+           P+   +   TEH         ++     P         
Sbjct: 308 FERIEYTDAIKLLERSGKKFDFPVEWGLDLQTEHERW-----LTEKHIGRPVVVTNYPEH 362

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 363 IKAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 66/206 (32%), Gaps = 22/206 (10%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA------RNHIAQELGIINCNC 431
            L  +    +  R D    D  F          S           R      + ++  + 
Sbjct: 269 FLKFLFKTVLEERTD----DLAFITERVEKTTISKLEGFIKSPFERIEYTDAIKLLERSG 324

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKAFQYDLV 485
            +F + +++      E E+ +   H                  ++ ND     A   D++
Sbjct: 325 KKFDFPVEWGLDLQTEHERWLTEKHIGRPVVVTNYPEHIKAFYMRLNDDGKTVA-AMDVL 383

Query: 486 CNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
             G  EI  G  R    E++    +  G+        +       + G  PH G   G +
Sbjct: 384 APGIGEIIGGSQREERLEMLDIRMAQFGLDPT----HYQWYRDFRRYGSVPHAGFGLGFE 439

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCD 570
           R+++ + G  N+R+   +P + +  +
Sbjct: 440 RLMVYVCGLSNIRDAIPYPRAPSSAE 465


>gi|330832585|ref|YP_004401410.1| asparaginyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329306808|gb|AEB81224.1| asparaginyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 448

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/305 (20%), Positives = 112/305 (36%), Gaps = 24/305 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-----------NPDSACFEIAKSV 65
           VG  V +  WV      G + FL +RD     Q VA              +  F++AK +
Sbjct: 15  VGQEVTIGAWVANKSGKGKLAFLQLRDGTAFFQAVALKPNFIEKFGEEAGTEKFDVAKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  +++ P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKF-------GYELDVTDLEVIGESQDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR          R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             Q ++  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E SF+ 
Sbjct: 185 FGQPAY--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLS 241

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            ++ L+  E  ++ + +   +    +   L    D   R        +     +  + EH
Sbjct: 242 HEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRYIAEPFKRVAYDDAITLLQEH 301

Query: 306 FVHSE 310
               +
Sbjct: 302 EADED 306



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 22/136 (16%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ K   E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDNYDALVAKMDELGMDKSEYE----FYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMS 565
           + G K++RE   FP  
Sbjct: 427 VAGTKHIREAIPFPRM 442


>gi|58271550|ref|XP_572931.1| lysine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21]
 gi|134115106|ref|XP_773851.1| hypothetical protein CNBH3030 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256479|gb|EAL19204.1| hypothetical protein CNBH3030 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229190|gb|AAW45624.1| lysine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 630

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 116/267 (43%), Gaps = 19/267 (7%)

Query: 14  VSDVGSFVRLSGWVHRVR-PHGGIIFLDIR-DHYGITQVVANPDSACFEIA----KSVRS 67
            + +   + L+G V+ +R     + F D++ D   +  +    ++A  E        +R 
Sbjct: 149 TAQLNEPISLAGRVYTIRESSSKLRFYDLKADGVKVQIMAQAQNAASLEEYLDTHDRIRR 208

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             ++ + G         I +    G++ LS   I++LS    L     G        R++
Sbjct: 209 GDIIGVTG---------IPSRTKMGELSLSISSIQLLSPCLHLLPGREGV--VDLETRYR 257

Query: 128 YRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            R+LDL  +   +   V R+++IN +R  + A+ F+E  TP+++  +        V    
Sbjct: 258 KRYLDLIMNPSTRDIFVTRSKVINYIRKYLDAQGFLEVETPMMSMIAGGATAKPFVTHHN 317

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           +      +  AP+ Y + L+  G DR F+I   FR+E       P EF   +  M++ + 
Sbjct: 318 DLKLDLFMRIAPELYLKELVVGGLDRVFEIGRVFRNEQIDMTHNP-EFSICEFYMAYADM 376

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNN 273
            DI++  E ++ G+ +  + G  ++ +
Sbjct: 377 YDIMDMTEELIEGMVKSLTGGTKLTFH 403



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++      EI +     +      + F      KE  +    G       A +
Sbjct: 510 RPGLCERFEAFLCTKEICNAYTELNDPFDQRERFMEQVRQKEQGDEEAQGVDETFLDALE 569

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG   GIDR+VM L    N++EV LFP  +
Sbjct: 570 YGLPPTGGWGLGIDRLVMFLTDCSNIKEVLLFPAMR 605


>gi|309799388|ref|ZP_07693629.1| asparaginyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308116986|gb|EFO54421.1| asparaginyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 447

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 130/362 (35%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F+  K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVFVTGVVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGT- 288
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEY 300

Query: 289 ------DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
                 D   L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVINYPADIKAFYMKPVPGNPDRVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ +   E          + G  PHGG   GI+R+V  
Sbjct: 370 EIIGGSMREEDYDALVAKMEELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTF 425

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
             G K++RE   FP   +    
Sbjct: 426 AAGTKHIREAIPFPRMLHRIKP 447


>gi|291528414|emb|CBK94000.1| asparaginyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 463

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 114/349 (32%), Gaps = 51/349 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
               V + GWV   R      F+ + D       QVV       ++    +     + + 
Sbjct: 17  ADKEVTIGGWVRSNRNSKNFGFIVVNDGTFFEPIQVVYGNGLDNYDEVGKINVGAAIIVR 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++                E+ A ++ +   A     P+  +R   E +R     L  R
Sbjct: 77  GTLVLTPD-------AKQPFEIQAAEVTVEG-ASTPDYPLQKKRHTFEYLR-TISHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +T       R+    ++       +F+   TP++T S  EGA +    + ++       
Sbjct: 128 TNTFEAVFRVRSLCAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDLNNLPMT 187

Query: 190 ---------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+  P       Q      A  F   +   P FR E+  + R   EF+ +
Sbjct: 188 EEGKVDFSKDFFNKPTNLTVSGQLNGETYAMAFKNIYTFGPTFRAENSNTTRHAAEFWMI 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSNNFLR 276
           + E++F + +D +   E++L+ V                            N V N+F R
Sbjct: 248 EPEIAFADLEDDMMLAESMLKYVINYVLENAPEEMAFFNNFVDKGLLDRLRNVVENDFAR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
           + Y +AI             +       TEH  +   +++ + + V   
Sbjct: 308 VTYTEAIDILSKHNDKFDYKVSWGCDLQTEHERYLTEQIYKRPVFVTDY 356



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ D+P     +E K        F M        K ND     A    LV    EI 
Sbjct: 349 RPVFVTDYP-----KEIK-------AFYM--------KLNDDGKTVAAVDCLVPGIGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + +L   + +G+S    E+ +       + G   H G   G +R VM L G
Sbjct: 389 GGSQREDDYDKLLARINELGLS----EDDYKFYLDLRKYGSARHAGFGLGFERCVMYLTG 444

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N C+L
Sbjct: 445 MGNIRDVIPFPRTVNNCEL 463


>gi|255722135|ref|XP_002546002.1| aspartyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240136491|gb|EER36044.1| aspartyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 578

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 86/389 (22%), Positives = 150/389 (38%), Gaps = 55/389 (14%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAKSV 65
             DL  ++ G  V     VH+ R  G  ++FL +R    + Q  +  N D+    ++K +
Sbjct: 115 IKDLSTANDGDNVIFRARVHKTRQQGATMVFLTLRQQTDLIQALLKTNKDTDSHAVSKQM 174

Query: 66  RSE-------WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
                      ++ ++G V     +  +A +    +E+   KI  +    E    +  + 
Sbjct: 175 VKWTGSINLESIVLVEGKVAKVEEKIKSATV--QDVEIHISKIYTIQETPEQLPLLIEDA 232

Query: 119 EYPE-------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
              E               R   R +DLR  T       ++ +    R  +I +NF E  
Sbjct: 233 SRTEQEAEELGLPGVNLDTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLIKKNFTEIH 292

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP + A++ EG  +    +     +F A  Q+PQ YKQ L+A+ F++ F+IAP FR E+ 
Sbjct: 293 TPKIIAAASEGGSNVFQINYFKGSAFLA--QSPQLYKQQLIAADFEKVFEIAPVFRAENS 350

Query: 226 RSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR-------- 276
            + R   EF  LD+EM+F    D++L  +E +   +F E     +     +R        
Sbjct: 351 NTHRHMTEFTGLDLEMAFEQHYDEVLEVLEELFVFIFTELKTRFSKEIAAVRRQFPVEEF 410

Query: 277 -ICYDDAIRRY------------GTDKPDL-----RNPIIMHNVTEHFVHSEFRVFSK-I 317
            I  D  + +             G D  D       N  ++  +      ++F +  K  
Sbjct: 411 KIPKDGKMVKLHFKEGIAMLREAGKDVDDFEDLSTENEKLLGKLVREKYDTDFYILDKFP 470

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           L+V P Y +          +  F  R  E
Sbjct: 471 LAVRPFYTMPDAEDPRYSNSYDFFMRGEE 499



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 10/121 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF             D     +  YD    G EI SG  R H  E++ +    
Sbjct: 468 KFPLAVRPFYTMPDA------EDPR--YSNSYDFFMRGEEILSGAQRIHDPELLKERIRA 519

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             ++ +V          AF  G PPH G   G++R+VM  L  KN+R  SLFP       
Sbjct: 520 HEVNPDV--PGLSDYVDAFTYGCPPHAGGGIGLERVVMFFLDLKNIRRASLFPRDPKRLT 577

Query: 571 L 571
            
Sbjct: 578 P 578


>gi|50284857|ref|XP_444856.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524158|emb|CAG57749.1| unnamed protein product [Candida glabrata]
          Length = 548

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 68/346 (19%), Positives = 130/346 (37%), Gaps = 30/346 (8%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
             VG  V++SGW+HR+R +  ++F+ +RD YG  Q V   D A  + +  +  E  + + 
Sbjct: 120 ELVGQRVKISGWIHRLRSNKKVMFIVLRDGYGYLQSVLTGDLAIAQQSLDLTIESTVTLY 179

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--REYPESIRFKYRFLD 132
           G +              G +EL     E++ +A         +       S+    R L 
Sbjct: 180 GTITKVPEG----KSAPGGVELLVDYYEVVGLAPSGDEAFTNKIAEGADPSLLLDQRHLA 235

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +TL   +  R  ++ S+R     E+  E + P +  +  EG           + ++ 
Sbjct: 236 LRGETLSAVMKVRAALMKSIRRVYTEESLTEVTPPCMVQTQVEGGSTLFKLDYYGEQAY- 294

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  + S     + +   FR E   + R   E+  ++ E++F+  +++L+ 
Sbjct: 295 -LTQSSQLYLETCLPS-LGDVYCVQESFRAEKSHTRRHLSEYTHIEAELAFLTFEELLDH 352

Query: 253 MENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRY------GTDKPD 292
           +E VL    +                 +       F+R+ Y DAI           D  +
Sbjct: 353 IERVLCKTVQYILEDPIAGPLVKQLNPDFQAPKMPFMRLEYKDAIEWLKEHDIKNEDGEE 412

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
            +    +    E    ++      +L+  P         +    NR
Sbjct: 413 FKFGDDIAEAAER-KMTDTIGVPILLTKFPAEIKSFYMPRCKDDNR 457



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K       F MP+   ++     +         L+    EI  G +R +  E +L  F  
Sbjct: 439 KFPAEIKSFYMPRCKDDNRVTESVDV-------LMPTVGEITGGSMRINTEEELLAGFKR 491

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I  +     +       + G  PHGG   G +RI+  L     VR+ SL+P     C 
Sbjct: 492 ENIDPKA----YYWFIDQRKYGTCPHGGYGLGTERILAWLCNRFTVRDCSLYPRFSGRCK 547

Query: 571 L 571
            
Sbjct: 548 P 548


>gi|83644617|ref|YP_433052.1| lysyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|123726432|sp|Q2SL47|SYK_HAHCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|83632660|gb|ABC28627.1| lysyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 507

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 77/362 (21%), Positives = 135/362 (37%), Gaps = 34/362 (9%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL             +     ++SG +  +R      F+ I+D  G  Q+  + 
Sbjct: 38  RDSYCADLQARYGDKSKEELEEASVRAKVSGRIMAMRGP----FVVIQDMTGRIQLYIDR 93

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                E  ++V+   +  I       +AE        G + ++ +   ++  A   PLP 
Sbjct: 94  KGLPPEQLENVKLWDLGDI------VAAEGALHKSDKGDLYVNMENPRLMVKALR-PLPD 146

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-S 172
             +      +R++ R+LDL  +   +   + R+++I S+R  +   +FIE  TP+L    
Sbjct: 147 KHKGLTNTEMRYRQRYLDLITNEEARETFRIRSKVIESIRYFLTKRDFIEAETPMLQVIP 206

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          + L  AP+ Y + L+  GF+R F+I   FR+E   +   P 
Sbjct: 207 GGATARPFVTYHNALDIEMF-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP- 264

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF  ++   +F +  D++N  E +LR V +E      V N       D           D
Sbjct: 265 EFTMIEFYQAFADYKDLMNLTEEMLRWVAQEALGTTEVRNTSKNTDGDVVDEI----IYD 320

Query: 293 LRNPIIMHNVTEHFVHSEFRV----FSKILSVNPGYEVWAIPAKGG-GGNRAFCDRMNEW 347
              P I   V E  +H    +       +           IP K   G  +   +   + 
Sbjct: 321 FGKPFIRMTVVESILHFNPELTLGDIDNMDGAKKVATGLGIPLKASWGLGKIQIEIFEKT 380

Query: 348 AR 349
             
Sbjct: 381 VE 382



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 4/126 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E ++         P       + ND       +++    G EIA+G    +  E   + F
Sbjct: 382 EHRLMQPTFITEYPTEVSPLARRNDDNPFVTDRFEFFVGGREIANGFSELNDPEDQAERF 441

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 KE  ++           A + GMPP  G   GIDR+VMLL  + ++R+V LFP 
Sbjct: 442 RKQVAEKEAGDDEAMFFDEDYITALEHGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPH 501

Query: 565 SQNFCD 570
            +   D
Sbjct: 502 MRPLAD 507


>gi|71892195|ref|YP_277928.1| asparaginyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|123747818|sp|Q492P3|SYN_BLOPB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|71796301|gb|AAZ41052.1| asparaginyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 470

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/375 (16%), Positives = 124/375 (33%), Gaps = 52/375 (13%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            + + + GW+   R     I FLD+ D   I  +        ++   + ++E +    G 
Sbjct: 17  NTEITIQGWIRTRRDSKAKISFLDLYDGSCINSLQI----IAYDKLHNYKNEILRLTSGC 72

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            +      + +  I   +E+ A+ I+IL   E+        +++      +   L  R +
Sbjct: 73  SVIIVGIIVKSIGIKQHVEVIAKNIKILGWIEDPSTYPITAKKHTMEYLREVSHLRPRTN 132

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL--------------- 181
           T+      R  +  ++   +  + FI   TPI+TA   EG+                   
Sbjct: 133 TIGAVARIRDTLSQAIHNFLHKQGFIWIPTPIITACDTEGSSKMFCVSTSETQKILNNPN 192

Query: 182 ---VPSRVNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                +      F+   A      Q      A    + +   P FR E   ++R   EF+
Sbjct: 193 EKLHHTHDTTYDFFSKKAFLTVSGQLNAEAYACALSKVYTFGPTFRAEYSNTNRHLAEFW 252

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSNNF 274
            ++ E +F+  DDI+   E++L+ +                            N     F
Sbjct: 253 MIEPEAAFMTLDDIIILAESLLKNIIRILLEKRSDDIKYLVDKINKNIITILENFSEIKF 312

Query: 275 LRICYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVN---PGYEVWAI 329
             I Y +AI+          NPI    ++ +EH  +     F   + +       + + +
Sbjct: 313 NHIEYTEAIKLLEICNRKFNNPIHWGTDLFSEHEKYLSEEYFKSPVIIKNFPKNIKAFYM 372

Query: 330 PAKGGGGNRAFCDRM 344
                    A  D +
Sbjct: 373 RLNDDNKTVASMDIL 387



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 14/138 (10%)

Query: 436 WIMDFPFYEWNEEEKKIDFAHNP-----FTMPQGGMESLKGNDLLSIKAFQYDLVCNGF- 489
           W  D   +  +E+    ++  +P     F            +D  ++ +   D++  G  
Sbjct: 337 WGTD--LFSEHEKYLSEEYFKSPVIIKNFPKNIKAFYMRLNDDNKTVASM--DILVPGIG 392

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R      + Q      ++    +  +       + G  PH G   G +R+++ 
Sbjct: 393 EIIGGSQREERLSKLDQRLQENCLT----QENYWWYRDLRRYGTVPHSGFGLGFERLMIY 448

Query: 550 LLGAKNVREVSLFPMSQN 567
           + G KN+R+V  FP +  
Sbjct: 449 VTGIKNIRDVIPFPRTSK 466


>gi|324994044|gb|EGC25963.1| asparagine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324994634|gb|EGC26547.1| asparagine--tRNA ligase [Streptococcus sanguinis SK678]
 gi|327490037|gb|EGF21826.1| asparagine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 448

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKF-------GYELDITDIEIIGESNDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F R+ YD+AI      
Sbjct: 242 HDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAIDLLQAH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 302 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVVNYPAAIKAFYMKPVEGNPDRVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 26/140 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMP--QGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +++++P             A   F M   +G  + +   DLL+ + +         EI
Sbjct: 333 PTFVVNYP------------AAIKAFYMKPVEGNPDRVLCADLLAPEGYG--------EI 372

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R    + ++   + +G+     E          + G  PHGG   GI+R+V  + 
Sbjct: 373 IGGSMREEDYDALVAKMNELGMDTTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFVA 428

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G K++RE   FP   +    
Sbjct: 429 GTKHIREAIPFPRMLHRIKP 448


>gi|323351392|ref|ZP_08087048.1| asparagine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322122616|gb|EFX94327.1| asparagine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 448

 Score =  172 bits (436), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGVVKEDERSKF-------GYELDITDIEIIGESNDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F R+ YD+AI      
Sbjct: 242 HDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAIDLLQAH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 302 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVVNYPAAIKAFYMKPVEGNPDRVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 55/140 (39%), Gaps = 26/140 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMP--QGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +++++P             A   F M   +G  + +   DLL+ + +         EI
Sbjct: 333 PTFVVNYP------------AAIKAFYMKPVEGNPDRVLCADLLAPEGYG--------EI 372

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R    + ++   +++G+     E          + G  PHGG   GI+R+V  + 
Sbjct: 373 IGGSMREEDYDALVAKMNDLGMDTTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFVA 428

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G K++RE   FP   +    
Sbjct: 429 GTKHIREAIPFPRMLHRIKP 448


>gi|330796288|ref|XP_003286200.1| hypothetical protein DICPUDRAFT_150147 [Dictyostelium purpureum]
 gi|325083870|gb|EGC37312.1| hypothetical protein DICPUDRAFT_150147 [Dictyostelium purpureum]
          Length = 584

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 89/605 (14%), Positives = 166/605 (27%), Gaps = 153/605 (25%)

Query: 2   HRYRTHSCGDLGVSDVG---------SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV- 50
            R  THS  +      G           V L G +  +R     + F+D+   Y    + 
Sbjct: 81  ERKLTHSIKEYRNEFSGLGNGNKLLDKSVVLVGRIKSIRNSSNKLTFIDLVSSYSNQPIV 140

Query: 51  ---------------------VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANI 89
                                    D   FE              G ++        A  
Sbjct: 141 DDVIKVENNETLKMTGAQFSLQVMADFKFFENQNHYPILMENLRKGDIIEIIG--YPAKS 198

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRI 148
             G++ +  + I IL+           ++     IR++ R LD L      +    R+++
Sbjct: 199 QKGELSVIPKDINILTPCNRPIPLKINDK----EIRYRNRPLDFLVNPENQRAFFIRSKV 254

Query: 149 INSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           IN +R  ++   F+E  TPIL T      A+ F+  S       + L  +P+ + + L+ 
Sbjct: 255 INYVRSFLVERGFLEVDTPILSTNVGGANAKPFITRSNSLNLDLF-LRISPELFLKQLVV 313

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
           +GFD+ F++                                             ++F N 
Sbjct: 314 AGFDKVFELG--------------------------------------------KQFRNE 329

Query: 268 NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
                +       +  + Y     D    + +    E      + +F       P     
Sbjct: 330 GIDLTHNPEFTTCEFYQAY----ADYETIVKLTE--EMLSGMVYSIFGTYEIPFPANPEI 383

Query: 328 AIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI 387
            +  K       F D++ E                                         
Sbjct: 384 KLNFKAPFQRINFIDKIEELTGR----------------------------------TLP 409

Query: 388 RVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG--IINCNCFEFCWIMDFPFYEW 445
           +             I  D    C         I  E+   +I   C +  +++D      
Sbjct: 410 KDLTSYDCIPELLDICRDNNIHCKEP-YTPTRILDEMASTLIEPLCIQPTFVID------ 462

Query: 446 NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML 505
                      +P  M          N     +  +++L   G E+ +     +  +   
Sbjct: 463 -----------HPLAMSPLAKIHRSNNQ----RTERFELFVGGKELVNAYSELNDPKEQR 507

Query: 506 QAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           + F      +   ++           A + G+PP GG   GIDR+ ML      +++V  
Sbjct: 508 KRFLAQSQDRITGDDEAQILDESFCNALEYGLPPTGGWGLGIDRLCMLFSNTTTIKDVLF 567

Query: 562 FPMSQ 566
           FP  +
Sbjct: 568 FPTMK 572


>gi|15901386|ref|NP_345990.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111658385|ref|ZP_01409072.1| hypothetical protein SpneT_02000464 [Streptococcus pneumoniae
           TIGR4]
 gi|148992568|ref|ZP_01822236.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|148997394|ref|ZP_01824999.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|149007545|ref|ZP_01831180.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|149011780|ref|ZP_01832976.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|149021816|ref|ZP_01835823.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168483580|ref|ZP_02708532.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|168488796|ref|ZP_02712995.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|168575262|ref|ZP_02721225.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|182684498|ref|YP_001836245.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|221232253|ref|YP_002511406.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225854982|ref|YP_002736494.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|225861373|ref|YP_002742882.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|237650224|ref|ZP_04524476.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237820893|ref|ZP_04596738.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|298230725|ref|ZP_06964406.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254954|ref|ZP_06978540.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298503278|ref|YP_003725218.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|303255328|ref|ZP_07341398.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303260169|ref|ZP_07346141.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262559|ref|ZP_07348500.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303264961|ref|ZP_07350876.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303266424|ref|ZP_07352312.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269400|ref|ZP_07355170.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|307068186|ref|YP_003877152.1| aspartyl/asparaginyl-tRNA synthetase [Streptococcus pneumoniae
           AP200]
 gi|20139908|sp|Q97PR0|SYN_STRPN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|14973032|gb|AAK75630.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|147756449|gb|EDK63490.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|147760904|gb|EDK67874.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147764211|gb|EDK71143.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147928585|gb|EDK79599.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|147930052|gb|EDK81039.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|172043153|gb|EDT51199.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|182629832|gb|ACB90780.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|183572685|gb|EDT93213.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|183578759|gb|EDT99287.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|220674714|emb|CAR69287.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225722470|gb|ACO18323.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|225726528|gb|ACO22379.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238873|gb|ADI70004.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|301794551|emb|CBW36995.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae INV104]
 gi|301802260|emb|CBW35012.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302597696|gb|EFL64772.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302636276|gb|EFL66770.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302638666|gb|EFL69129.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302641068|gb|EFL71445.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302644002|gb|EFL74261.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302645480|gb|EFL75712.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|306409723|gb|ADM85150.1| Aspartyl/asparaginyl-tRNA synthetase [Streptococcus pneumoniae
           AP200]
 gi|327389728|gb|EGE88073.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
 gi|332072335|gb|EGI82818.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
 gi|332074297|gb|EGI84774.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
 gi|332199587|gb|EGJ13662.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
 gi|332200104|gb|EGJ14177.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
 gi|332200983|gb|EGJ15054.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 447

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|307705989|ref|ZP_07642813.1| asparaginyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307620462|gb|EFN99574.1| asparaginyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 447

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPDS----------ACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGFEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|313123830|ref|YP_004034089.1| asparaginyl-tRNA synthetase-like protein 2 [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312280393|gb|ADQ61112.1| asparaginyl-tRNA synthetase-like protein 2 [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 432

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 71/324 (21%), Positives = 118/324 (36%), Gaps = 28/324 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   VR+  W+   R  G I+FL +RD     Q V   +      FE AK +R E 
Sbjct: 10  SSKHVDEEVRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              + G +   +             E+    +E++S  E         +E+       +R
Sbjct: 70  SFYLTGTIHEDARSHF-------GYEIQISDLEVVSNNE---GYPITNKEHGIDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R RI  +       E F++   PIL  S+PEG  +       +  
Sbjct: 120 HLWLRSRRPFAIMQIRNRIFKATVDFFENEGFVKFDAPILMHSAPEGTTELFHIDYFDHD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y   + A  F + F   P FR E  ++ R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEVGAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           L+  E  L  V  +                +  +   G D   LR P    N T      
Sbjct: 237 LDLQERFLSYVVGQVLEH-----------CEYELSILGRDLDKLR-PAAEGNYTRLSYDD 284

Query: 310 EFRVFSKILSVNPGYEVWAIPAKG 333
             ++  +        + +  P + 
Sbjct: 285 AVKMLQEAGKDFKWGDDFGAPDEA 308



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 55/174 (31%), Gaps = 22/174 (12%)

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
             +G+       D +K    A         + G  +       +  D PF+  N      
Sbjct: 272 AAEGNYTRLSYDDAVKMLQEAGK-DFKWGDDFGAPDEAFLSEQF--DRPFFIVN-----Y 323

Query: 453 DFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
             A  PF M +      +    D+ + + +         EI  G  R    + +      
Sbjct: 324 PVAIKPFYMKKNPENPLTYLCADVEAPEGYG--------EIMGGSEREADYDTLKAQIEE 375

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            G++     + +       + G  PH G   G +R++  +    +VRE   FP 
Sbjct: 376 AGLNL----DDYSWYLDLRKYGSVPHSGFGMGFERVIAWICKLDHVREAVPFPR 425


>gi|4455210|emb|CAB36533.1| putative aspartate-tRNA ligase [Arabidopsis thaliana]
 gi|7269540|emb|CAB79542.1| putative aspartate-tRNA ligase [Arabidopsis thaliana]
          Length = 504

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/274 (22%), Positives = 109/274 (39%), Gaps = 11/274 (4%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L    VGS V + G +H+ R  G  +F+ +R+     Q V         + K V+     
Sbjct: 79  LVEEIVGSEVSIRGRLHKNRLVGTKLFVILRESGFTVQCVVEETRVGANMIKFVKQLSRE 138

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--------EELPLPVFGEREYPES 123
            +  L+   S         T Q+E+  +K+  LS +        E+         +  + 
Sbjct: 139 SVVELIGVVSHPKKPLTGTTQQVEIHVRKMYCLSRSLPNLPLVVEDAARSESDIEKSGKD 198

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R   R LD+R          + ++  + R  + ++ F+E  TP L A S EG       
Sbjct: 199 TRLNNRVLDIRTPANQAIFRIQCQVQIAFREYLQSKGFLEIHTPKLIAGSSEGGSAVFRL 258

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               +G    L Q+PQ +KQ+ +     R F++ P FR ED  + R   EF  LD+EM  
Sbjct: 259 DY--KGQPACLAQSPQLHKQMAICGDMRRVFEVGPVFRAEDSFTHRHLCEFVGLDVEMEI 316

Query: 244 -VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            +   +I++ +  +   +F +           +R
Sbjct: 317 RMHYSEIMDLVGELFPFIFTKIEERCPKELESVR 350



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 24/163 (14%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMES 468
                D      ++LG +    ++     +F          +   A  PF TMP     +
Sbjct: 365 VDPLGDLNTESERKLGQLVLEKYK----TEFYMLH------RYPSAVRPFYTMPYENDSN 414

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
                     +  +D+   G EI SG  R H  E++ +     GI  + +         A
Sbjct: 415 Y---------SNSFDVFIRGEEIMSGAQRIHDPELLEKRARECGIDVKTIST----YIDA 461

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           F+ G PPHGG   G++R+VMLL    N+R+ SLFP        
Sbjct: 462 FRYGAPPHGGFGVGLERVVMLLCALNNIRKTSLFPRDSQRLTP 504


>gi|134097022|ref|YP_001102683.1| lysyl-tRNA synthetase class II [Saccharopolyspora erythraea NRRL
           2338]
 gi|291006232|ref|ZP_06564205.1| lysyl-tRNA synthetase class II [Saccharopolyspora erythraea NRRL
           2338]
 gi|133909645|emb|CAL99757.1| lysyl-tRNA synthetase class II [Saccharopolyspora erythraea NRRL
           2338]
          Length = 507

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 57/272 (20%), Positives = 107/272 (39%), Gaps = 20/272 (7%)

Query: 6   THSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           TH+  ++  +          G  V ++G V  +R  G + F  +R   G          +
Sbjct: 49  THTLAEVRAAHPDLAPDTYTGDQVGVAGRVMFLRNTGKLCFATLRGGDGT---ELQAMLS 105

Query: 58  CFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
             ++ +   + W   +D G  +    E I +    G++ + A +  +   A+ L      
Sbjct: 106 LKQVGEDALASWKSDVDLGDHVFVHGEVITSR--RGELSVMADEWRL--AAKTLRPLPVA 161

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
            +E  +  R + R++DL       + V+ R  +  S+R       FIE  TP+L      
Sbjct: 162 HKELGDETRVRQRYVDLIVRKQAADTVRTRATVQRSLRDSFQRRGFIEVETPMLQTLHGG 221

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+  S       Y L  AP+ Y +  +  G ++ F+I   FR+E   S   P EF
Sbjct: 222 AAARPFVTHSNAFDMELY-LRIAPELYLKRCVVGGIEKVFEINRNFRNEGSDSSHSP-EF 279

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
             L+   ++ + D +      +++   E  + 
Sbjct: 280 AMLEFYQAYSDYDGMARLTRQLVQEAAEALTG 311



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 53/154 (34%), Gaps = 28/154 (18%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                 + + L  +  + +   ++ DFP      E   +   H                 
Sbjct: 373 GKLVEELWEHL--VGDHLYAPTFVRDFPL-----ETAPLTRQHR---------------- 409

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAF 529
                A ++DL   GFE+A+G        V               +           RA 
Sbjct: 410 SEPGVAEKWDLYTRGFELATGYSELVDPVVERARLEEQARLAASGDEEAMHVDEDFLRAL 469

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + GMPP GG+  GIDR++M L G   +RE  LFP
Sbjct: 470 EYGMPPSGGVGMGIDRLLMALTGLG-IRETILFP 502


>gi|171186197|ref|YP_001795116.1| asparaginyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170935409|gb|ACB40670.1| asparaginyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 431

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 61/245 (24%), Positives = 99/245 (40%), Gaps = 13/245 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + GWV+R R     +F+ +RD  G+ Q+V   D   F+IA+ +  E  L   G ++   
Sbjct: 22  TVRGWVYRKRSLKEKVFVVLRDATGVIQLVFQRDK--FKIAEDLNIESALVATGRLVREP 79

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                     G +EL  +K+E  + A E                   R L LR   +   
Sbjct: 80  R-------APGGVELHVEKVEW-AYAGEPYPINEDAAAADSEYLLDVRHLWLRSRKMQAV 131

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +  R  +  ++        F E  TP+   ++ EG            G    L Q+ Q Y
Sbjct: 132 LKIRHTVFEAIHQYFRRSGFYEVQTPMFITAAVEGGATLFKVDYF--GQPVYLTQSSQFY 189

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ S  ++ + IAP FR E  R+ R   EF+  +MEM++   +D     E V+  V 
Sbjct: 190 LEALIYS-LEKVYVIAPSFRAEPSRTRRHLTEFWHAEMEMAWAGMEDAAKVGEEVISYVV 248

Query: 262 EEFSN 266
           E+   
Sbjct: 249 EKVLQ 253



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 6/104 (5%)

Query: 470 KGNDLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           + N         +D++      E+  GG R +    +++     G++ E  +        
Sbjct: 332 RNNPDRPEVTLSFDVLLPEGYGEVIGGGERIYDPVELVEKIKRFGLNPEDYQ----WYID 387

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             + G  PH G   G+DR+VM + GA ++R+V  FP        
Sbjct: 388 LRRYGSVPHAGFGLGVDRLVMWITGADHIRDVVPFPRDVRRTRP 431


>gi|322391555|ref|ZP_08065024.1| asparagine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321145638|gb|EFX41030.1| asparagine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 448

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEETGLEKFDTIKHL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 75  SQETSVFVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD+AI      
Sbjct: 242 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDEAIDLLQEH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 302 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPDRVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  + +   DLL+ + +         EI  G +R    + ++    
Sbjct: 339 YPAAIKAFYMKPVPGNPDRVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKME 390

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           ++G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 391 SLGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 446

Query: 570 DL 571
             
Sbjct: 447 KP 448


>gi|262200161|ref|YP_003271369.1| lysyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|296439659|sp|D0LB45|LYSX_GORB4 RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|262083508|gb|ACY19476.1| lysyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 1138

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 96/259 (37%), Gaps = 17/259 (6%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIA 62
           TH+  +      G+ V ++G V ++R  G + F D+ D  G  Q++           +  
Sbjct: 683 THTIAEAIAEPEGTQVTIAGRVTKMRDFGKVTFADVHDWSGQIQMLVEASRVIPGTPDFG 742

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             V    ++   G++             +G++ +              PLP         
Sbjct: 743 SDVDLGDLVEARGVI---------GRSRSGELSVLIDAWRFNGKCLR-PLPDKWSGLTDP 792

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R + R++DL       + +  R+ ++ ++R  +    F+E  TPIL        A  F
Sbjct: 793 EARVRQRYVDLAINPRSRELLATRSVVVKALRDFLADRGFMEVETPILQQIHGGANATPF 852

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                      Y L  AP+ Y + L   G ++ F+I   FR+E       P EF  L+  
Sbjct: 853 QTHINAYNLDLY-LRIAPELYLKRLCVGGVEKVFEIGRNFRNEGVDFSHNP-EFTSLEAY 910

Query: 241 MSFVEQDDILNTMENVLRG 259
            +  +   +L+    +++ 
Sbjct: 911 AAHSDYLKMLDLTREMIQH 929



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 53/160 (33%), Gaps = 28/160 (17%)

Query: 411  SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
              A      + + LG          +  DFP             + +P T          
Sbjct: 999  WDAGQIVLELYEHLG--EDRTTVPTFYTDFP------------TSTSPLTRAHRS----- 1039

Query: 471  GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLY 526
                    A ++DLV  G E+ +            +  +   I                 
Sbjct: 1040 ----KPGVAERWDLVAWGVELGTAYTELTDPVEQRKRLTAQSILAADGDPEAMELDEDFL 1095

Query: 527  RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A +  MPP GG+  G+DR+VML+ G +++RE   FPM +
Sbjct: 1096 TALEYAMPPTGGLGVGVDRVVMLITG-QSIRESLAFPMVK 1134


>gi|309366534|emb|CAP21280.2| CBR-KARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 598

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 109/264 (41%), Gaps = 10/264 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
                   V ++G +H  R  G  ++F DI       Q++AN      ++     +    
Sbjct: 124 NEQVADEIVSVAGRIHSKRESGSKLVFYDIHGEGTHIQIMANARFHTGDV--DFVTLHDR 181

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++  +          G++ L  +++  L+      LP        + +RF+ R+L
Sbjct: 182 IKRGDIVGFTG--QATRTKAGELSLIPKEVLQLTPCL-HMLPHSHFGLKDKELRFRKRYL 238

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQG 189
           DL     +  N V R++II  +R  +    F+E  TPI+   +    A+ F+        
Sbjct: 239 DLILNPRVKDNFVIRSKIITFLRRYLDNLGFLEVETPIMNQIAGGATAKPFITHHNDLDM 298

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           + + L  AP+ Y ++L+  G DR +++   FR+E       P EF   +  M++ + +D+
Sbjct: 299 NLF-LRVAPELYHKMLVVGGIDRVYEVGRLFRNEGIDLTHNP-EFTTCEFYMAYADYEDV 356

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN 273
           +   E++L  +         +  +
Sbjct: 357 IQLTEDLLSSMVLAIKGTYKIEYH 380



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 4/95 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++L     EIA+     +      Q F      K+  ++           A + 
Sbjct: 487 PGLTERFELFAVTREIANAYTELNDPITQRQRFEQQAKDKDAGDDEAQMIDETFCNALEY 546

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP GG   GIDR+ M+L    N++EV LFP  +
Sbjct: 547 GLPPTGGWGMGIDRLSMILTDNNNIKEVLLFPAMR 581


>gi|148988588|ref|ZP_01820021.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147925789|gb|EDK76864.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 447

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGIKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|308809533|ref|XP_003082076.1| OJ1717_A09.34 gene product (ISS) [Ostreococcus tauri]
 gi|116060543|emb|CAL55879.1| OJ1717_A09.34 gene product (ISS) [Ostreococcus tauri]
          Length = 542

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 70/275 (25%), Positives = 109/275 (39%), Gaps = 25/275 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-----CFEIAKSV 65
           DL  +     V + G VH VR  G   F+ +R      QVV   D         +   S+
Sbjct: 84  DLSGTLADEEVLVRGRVHNVRGKGKSAFIVLRQQTATVQVVLFVDDVHVSKGMVKWVCSL 143

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------ 119
             E V+ + G V+ R       +     +E+S ++I  +S +       F   +      
Sbjct: 144 PRETVVDVRG-VIVRPESGEVESCTQKDVEISLREIHCISRSVPTEDLPFLIEDASRPET 202

Query: 120 -----------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                        +  R   R LDLR    +     ++ +    R  ++  NF E  TP 
Sbjct: 203 AFENEKAQYVRVGQDTRLDNRVLDLRTPANNAIFKIQSGVGTLFREALLRRNFTEIHTPK 262

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L A + EG         +  G    L Q+PQ YKQ+ +    +  F+I P FR ED  + 
Sbjct: 263 LIAGASEGGAAVFRLDYMKLG-PACLAQSPQLYKQMAIMGDLEGVFEIGPVFRAEDSNTH 321

Query: 229 RLPGEFYQLDMEMSFVEQDD-ILNTMENVLRGVFE 262
           R   EF  LDMEMS  E  D +L+ ++ +   +F+
Sbjct: 322 RHLCEFTGLDMEMSIKEHYDEVLDVLDELFVSMFD 356



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 60/169 (35%), Gaps = 24/169 (14%)

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMP 462
            D         D      + LG +    +      DF          +      PF TMP
Sbjct: 397 QDAGVEVDPLGDIGTETERILGKLVKEKYG----TDFYMLT------RYPINARPFYTMP 446

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
                +   +         +D+   G EI SG  R H  +++ +     GI    +++  
Sbjct: 447 APDDPNYTNS---------FDIFIRGQEIISGAQRIHDPKLLAERALACGIELPTIQS-- 495

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
                +F+ G  PHGG   G++R+ ML L   N+R+ S+FP        
Sbjct: 496 --YIDSFKYGATPHGGCGVGLERVAMLFLDLNNIRKTSMFPRDPKRIAP 542


>gi|295698347|ref|YP_003603002.1| lysyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157192|gb|ADD79637.1| lysyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 490

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 62/275 (22%), Positives = 115/275 (41%), Gaps = 20/275 (7%)

Query: 4   YRTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
            R H   DL                  V +SG +   R  G   F  ++D  G  QV  +
Sbjct: 24  KRDHLSEDLYKKFYEKESKELKKLENYVSVSGRMISKRIFGKASFFTLQDMSGKIQVYVS 83

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
            +    EI +    ++  C  G ++    +       TG++ +  +KI +L+ +      
Sbjct: 84  SNHIKEEIYEK---KFKKCNLGDLIGVHGKVF--KTKTGELTVDCRKIFLLTRSYRTIS- 137

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA- 171
                   + I+ + R LDL  +   +N  + R++II+ +RC M  + F+E  TPI+   
Sbjct: 138 SKFYGLKNKEIQHRNRCLDLILNQRSRNTFIIRSKIISWLRCFMNEKGFMEVETPIMQPM 197

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                A+ F+      +   Y L  AP+ Y + L+  GF++ F+I   FR+E   +   P
Sbjct: 198 YGGASAKPFMTRHNALKSELY-LRIAPELYLKRLVIGGFEKIFEIGKNFRNEGVSTIHNP 256

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
            EF  ++   ++    D+++ +EN+   + E    
Sbjct: 257 -EFTMMEFYEAYKNYLDLMDFIENLFHEIVESTLK 290



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 6/121 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM---- 504
           EKK+         P       K +    + A +++L   G+EIA+G    +         
Sbjct: 365 EKKLIQPTFVTEYPIDVSPLSKRSRENPLVAERFELFIGGYEIANGFSELNDPVDQTSRF 424

Query: 505 LQAFSNVGISKEVVENRF--GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           LQ     GI +++ E+ F       + + G+PP  G+  GIDR+VMLL   +++R+V  F
Sbjct: 425 LQQSRKNGIRRDIDEDTFYDKDYITSLEYGLPPTAGVGIGIDRLVMLLTNRRSIRDVIFF 484

Query: 563 P 563
           P
Sbjct: 485 P 485


>gi|50913904|ref|YP_059876.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|59798489|sp|Q5XD20|SYN_STRP6 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|50902978|gb|AAT86693.1| Asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 448

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 133/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I F+ +RD       V   P+             F++ K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +EI+  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKF-------GYELDITDLEIIGESHEYPVTP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYATYEFFDQNGFIKFDSPILSENAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             + +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E SF+ 
Sbjct: 185 FGKPAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLS 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            ++ L+  E  ++ + +   +                   ++  F R+ YDDAI      
Sbjct: 242 HEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYITEPFKRVSYDDAITLLQEH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++    ++ + +    G   R  C 
Sbjct: 302 EADEDTDYEHLEHGDDFGSPHETWISNYFGVPTFVVNYPASFKAFYMKPVPGNPERVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 22/136 (16%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ K      +       + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDNYDALVAKMDELGMDKSE----YDFYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMS 565
           + G K++RE   FP  
Sbjct: 427 VAGTKHIREAIPFPRM 442


>gi|187778145|ref|ZP_02994618.1| hypothetical protein CLOSPO_01737 [Clostridium sporogenes ATCC
           15579]
 gi|187775073|gb|EDU38875.1| hypothetical protein CLOSPO_01737 [Clostridium sporogenes ATCC
           15579]
          Length = 429

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 15/254 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              + L GW+H++R    I FL IRD  G+ Q + + +         V+ E ++ I G V
Sbjct: 14  NKKINLQGWIHKIRKLKDITFLIIRDRSGLVQCIVDNNKL---DLSQVKIESIVSITGAV 70

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYPESIRFKYRFLDLRR 135
                 T N N      E+  + +EI++ A +       +   E         R L LR 
Sbjct: 71  ---KESTNNLN----PFEIQVENLEIINAALDELPVEINKENLEINLDTMLNNRVLSLRH 123

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             ++     +  I+N  R  +  E F E  TP +     EG  +          ++ A  
Sbjct: 124 RKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFENTAYLA-- 181

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTME 254
           Q+PQ YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+E+ F+E + DI+   E
Sbjct: 182 QSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDEKDIMEIEE 241

Query: 255 NVLRGVFEEFSNGN 268
            +L+ + E+ +N  
Sbjct: 242 RLLKFILEKLNNEC 255



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 78/213 (36%), Gaps = 16/213 (7%)

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  DE   +     + K +        R   ++ + +      G P      A    +
Sbjct: 227 IGFIEDEKDIMEIEERLLKFILEKLNNECREYFNLLEAELPRIQGGIPKITFKEALGILS 286

Query: 419 HIAQELGI---INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
               +  +   ++    +          ++ +E+   DF     T        +    L 
Sbjct: 287 REYNKNNLTYDLDPESEKLI-------CKYAKEKLNSDFIFL--TNYPRKKRPMYTMPLG 337

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
                 +DL+  G EI +GG R H   +++      G + +  E+        F+ GMP 
Sbjct: 338 EDGTHSFDLLFRGIEITTGGQRIHDYNMLIDNMKFKGFNPKDYES----YLSVFKYGMPK 393

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           HGG+A G++R+   LLG +NVRE +L    +  
Sbjct: 394 HGGLAIGLERLTARLLGLENVREAALITRDRTR 426


>gi|71275198|ref|ZP_00651485.1| Asparaginyl-tRNA synthetase, class IIb [Xylella fastidiosa Dixon]
 gi|71898278|ref|ZP_00680452.1| Asparaginyl-tRNA synthetase, class IIb [Xylella fastidiosa Ann-1]
 gi|170731189|ref|YP_001776622.1| asparaginyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|71164007|gb|EAO13722.1| Asparaginyl-tRNA synthetase, class IIb [Xylella fastidiosa Dixon]
 gi|71732017|gb|EAO34074.1| Asparaginyl-tRNA synthetase, class IIb [Xylella fastidiosa Ann-1]
 gi|167965982|gb|ACA12992.1| asparaginyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 466

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 68/389 (17%), Positives = 117/389 (30%), Gaps = 50/389 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    G+ F+ + D      +     +        VR     
Sbjct: 12  GKIQVGSEVTVRGWVRTRRDSKAGLSFVSVSDGSCFAAIQVVTPAHLPNYETEVRK---- 67

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +        +     Q E+ AQ IE++   E+        +++      +   L
Sbjct: 68  LTTGCAVIVIGTLAPSLGQGQQFEIQAQSIEVVGWVEDPETYPIQPKQHSLEFLREVAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--- 188
             R +        R  +  ++        +   +TPI+T S  EGA      S ++    
Sbjct: 128 RPRTNLFGAVARIRHCLSQAVHRFFHENGYYWITTPIITTSDAEGAGQMFRVSTLDLVNL 187

Query: 189 -----------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q      A    + +   P FR E+  + R   EF
Sbjct: 188 PRTETGGIDFSHDFFGKETFLTVSGQLNVEAYALALSKVYTFGPTFRAENSHTPRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNN 273
           + ++ E++F +  +     E  L+ +F+                            + + 
Sbjct: 248 WMIEPEIAFADLVEDARVAEQFLKFLFKTVLEERADDLAFITERVEKTTISKLEGFIKSP 307

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           F RI Y DAI+     +     P+   +   TEH         ++     P   V     
Sbjct: 308 FERIEYTDAIKLLEKSEKKFDFPVEWGLDLQTEHERW-----LTEKHIGRPVVVVNYPEH 362

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 363 IKAFYMRLNDDGKTVAAMDVLAPGIGEII 391


>gi|268573520|ref|XP_002641737.1| C. briggsae CBR-DRS-1 protein [Caenorhabditis briggsae]
 gi|187031522|emb|CAP29586.1| CBR-DARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 531

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/324 (22%), Positives = 129/324 (39%), Gaps = 24/324 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAKSVRSEW 69
           ++ V++    + + G VH +R  G   F+ +R   Y +   +   D    ++ K V S  
Sbjct: 74  EVNVANATKDIWVRGRVHTIRSKGRNCFIVLRQGVYTVQIAMFMNDKISKQMLKFVSSIS 133

Query: 70  VLCIDGLVMSR-SAETINANIITGQIELSAQKIEILSVAEE----------LPLPVFGER 118
              I  +  +    ET   +     +EL AQ++ ++S +               P   E+
Sbjct: 134 KESIIDVFATINKVETPIESCTQKDVELLAQQVFVVSSSAPKLPLQIEDASRRAPTDEEK 193

Query: 119 EYPES---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
              +           R   R LDLR  T H     +  I N  R  + A  F+E   P +
Sbjct: 194 NSEQENQLAVVNLDTRLDNRVLDLRTTTSHAIFRIQAGICNQFRNILDARGFVEIMAPKI 253

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
            ++  EG  +    S     ++ A  Q+PQ YKQ+ +A  F++ + I P FR ED  + R
Sbjct: 254 ISAPSEGGANVFEVSYFKGSAYLA--QSPQLYKQMAIAGDFEKVYTIGPVFRAEDSNTHR 311

Query: 230 LPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
              EF  LD+EM+F     +++ T+  VL  +F+          + +   Y     ++  
Sbjct: 312 HMTEFVGLDLEMAFNFHYHEVMETIAQVLTQLFKGLQQNYQDEISAVGNQYPAEPFQFCE 371

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFR 312
               L+ P  +  + EH V     
Sbjct: 372 PPLILKYPDAIALLREHKVEIGDE 395



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 74/202 (36%), Gaps = 27/202 (13%)

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-IINCN 430
           +  V         +     L ++  D+   +    ++      D    + + LG ++   
Sbjct: 355 ISAVGNQYPAEPFQFCEPPLILKYPDAIALLREHKVEIGDE-EDLSTPVEKFLGKLVKEK 413

Query: 431 CFEFCWIMD-FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
                +++D FP             A  PF       +           +  YD+   G 
Sbjct: 414 YHTDFYVLDKFPL------------AVRPFYTMPDAHDGR--------YSNSYDMFMRGE 453

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI SG  R H ++++++   +  +    +++       AF+ G PPH G   G++R+ ML
Sbjct: 454 EILSGAQRIHDADMLVERAKHHQVDLAKIQS----YIDAFKYGCPPHAGGGIGLERVTML 509

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
            LG  N+R  SLFP        
Sbjct: 510 FLGLHNIRLASLFPRDPKRLTP 531


>gi|331266013|ref|YP_004325643.1| aspartyl/asparaginyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682685|emb|CBZ00302.1| aspartyl/asparaginyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 447

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 130/362 (35%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F+  K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVINYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKME 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|222055387|ref|YP_002537749.1| asparaginyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221564676|gb|ACM20648.1| asparaginyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 461

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/288 (23%), Positives = 111/288 (38%), Gaps = 27/288 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           R   C  L   + G  + + GW   VR    + FL + D   I   QVV  PD   +   
Sbjct: 4   RIRICDALTAKEAGGELLVKGWARTVRAGKDVAFLAVNDGSCIANLQVVVEPDIVNYPEV 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             + +   + + G++    A          + ELSA +IEI+  A+E   P+  +R   E
Sbjct: 64  SRLGTGSAVAVRGVLRESPAAG-------QRYELSATQIEIIGQADE-SYPLQKKRHSFE 115

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R     L  R +T       R+ +  ++        F+   TPI+TA+  EGA +   
Sbjct: 116 YLR-TIAHLRPRTNTFGAVFRVRSSLAQAIHRFFAERGFLYVHTPIITANDCEGAGELFR 174

Query: 183 PSRVNQ-------------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
            + +N              G F+A         Q +  L A  F   +   P FR E+  
Sbjct: 175 VTTLNMAKPPLKAGEVDYSGDFFAQATGLTVSGQLEGELFAQAFSNIYTFGPTFRAENSN 234

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           + R   EF+ ++ EM+F +        E+ L+ +     +  T    F
Sbjct: 235 TARHAAEFWMIEPEMAFADLMADAALAEDFLKFLCRHVLDNCTEDMRF 282



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 4/99 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    LV    EI  G  R    +++L+    +GI+    E        +
Sbjct: 363 MRQNDDGRTVAAMDLLVPKVGEIIGGSQREERFDLLLERMGELGIN----EEGLWWYLDS 418

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++M L G +N+R+V  FP +  
Sbjct: 419 RRWGSCPHAGFGLGFERLLMYLTGMENIRDVIPFPRTPR 457


>gi|313123660|ref|YP_004033919.1| asparaginyl-tRNA synthetase-like protein 2 [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312280223|gb|ADQ60942.1| asparaginyl-tRNA synthetase-like protein 2 [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 432

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 70/324 (21%), Positives = 118/324 (36%), Gaps = 28/324 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   VR+  W+   R  G I+FL +RD     Q V   +      FE AK +R E 
Sbjct: 10  SAKHVDEEVRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              + G +   +             E+    +E++S  E         +E+       +R
Sbjct: 70  SFYLTGTIHEDARSHF-------GYEIQISDLEVVSNNE---GYPITNKEHGIDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R RI  +       E F++   P+L  S+PEG  +       +  
Sbjct: 120 HLWLRSRRPFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEGTTELFHIDYFDHD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y   + A  F + F   P FR E  ++ R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEVGAEAFGKIFTFGPTFRAEASKTRRHLTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           L+  E  L  V  +                +  +   G D   LR P    N T      
Sbjct: 237 LDLQERFLSYVVGQVLEH-----------CEYELSILGRDLDKLR-PAAEGNYTRLSYDD 284

Query: 310 EFRVFSKILSVNPGYEVWAIPAKG 333
             ++  +        + +  P + 
Sbjct: 285 AVKMLQEAGKDFKWGDDFGAPDEA 308



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 55/181 (30%), Gaps = 22/181 (12%)

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
             +G+       D +K    A         + G  +       +  D PF+  N      
Sbjct: 272 AAEGNYTRLSYDDAVKMLQEAGK-DFKWGDDFGAPDEAFLSEQF--DRPFFIVN-----Y 323

Query: 453 DFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
             A  PF M +      +    D+ + + +         EI  G  R    + +      
Sbjct: 324 PVAIKPFYMKKNPENPLTYLCADVEAPEGYG--------EIMGGSEREADYDTLKAQIEE 375

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G++     + +       + G  PH G   G +R++  +    +VRE   FP       
Sbjct: 376 AGLNL----DDYSWYLDLRKYGSVPHSGFGMGFERVIAWICKLDHVREAVPFPRMIKRMQ 431

Query: 571 L 571
            
Sbjct: 432 P 432


>gi|302764308|ref|XP_002965575.1| hypothetical protein SELMODRAFT_84215 [Selaginella moellendorffii]
 gi|300166389|gb|EFJ32995.1| hypothetical protein SELMODRAFT_84215 [Selaginella moellendorffii]
          Length = 521

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/286 (23%), Positives = 105/286 (36%), Gaps = 27/286 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----FEIAKS 64
             +LG    GS V + G VH  R  G + FL +R+     Q V + ++       + A  
Sbjct: 61  ISELGTDLEGSTVLVRGRVHSKRAKGKMAFLVLRETIHTVQCVVSMENVGSKQFVKYASL 120

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS------------VAEELPL 112
           +  E V+ + G V +           T  +E+   ++  +S             A     
Sbjct: 121 LSKESVVDVTGNVSNPRNPVSGT---TQPVEIQVTELHCISRSTNELPLLLEDAARSDQD 177

Query: 113 PVFGERE------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                +E        +  R   R LDLR          ++ I +     + A  F +  T
Sbjct: 178 IEKAAKEGIQYARVLQDTRLNNRVLDLRIPANQAIFTVQSEISSLFHDFLRANKFRQIHT 237

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P L A + EG          N      L Q+PQ +KQ+ +   F R F+I P FR E   
Sbjct: 238 PKLIAGASEGGSAVFKLQYAND-QPACLAQSPQLHKQMAICGDFRRVFEIGPVFRAEKSF 296

Query: 227 SDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVS 271
           + R   EF  LD EM   E   +I++ +  +   VF E +      
Sbjct: 297 THRHLCEFIGLDFEMEIKEHYFEIIDLIGKLFIYVFNELNKNCKKE 342



 Score =  117 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 59/159 (37%), Gaps = 20/159 (12%)

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
             D      + LG++    ++     DF          +   A  PF             
Sbjct: 383 LGDLDTETERRLGLLVKERYK----TDFYILH------RYPLAVRPFYTMPAVD------ 426

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D     +  +D+   G EI SG  R H  +++L+      I    +         +F  G
Sbjct: 427 DPK--YSNSFDVFIRGEEIISGAQRVHDKDLLLKRIEECNIDPNAI--GLQNYINSFSYG 482

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            PPHGGI  G++R+ ML     N+R+VSLFP   N    
Sbjct: 483 APPHGGIGVGLERVAMLFCNLDNIRKVSLFPRDPNRLAP 521


>gi|160945374|ref|ZP_02092600.1| hypothetical protein FAEPRAM212_02896 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443105|gb|EDP20110.1| hypothetical protein FAEPRAM212_02896 [Faecalibacterium prausnitzii
           M21/2]
          Length = 444

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 22/274 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT    +   + +G  V++ G++  +R    + F+ ++D  G  Q+           +  
Sbjct: 3   RT-YINEAQKA-IGGTVKVQGFIENLRNSKYMAFIVLKDITGKLQITVEKADHPELVDTI 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-----GE 117
             +  + V+ + G VM       N  +  G +E+  + IE+ S A  LP+         +
Sbjct: 61  DQLTPDSVITVTGKVME------NDYVKMGGVEMIPESIEVESTANALPIVRKEIAATKK 114

Query: 118 REYPE----SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
           ++  E      R  YR++DLR D        ++  +N+MR  ++  NFIE  TP L A++
Sbjct: 115 KKAVERSSIDQRIDYRWIDLRTDENQLMFKAQSCFVNAMRKFLLDRNFIEIHTPKLIAAA 174

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            E   +       ++ ++ A  Q+PQ YKQ+ MA+GF+R F+  P FR E   +++   E
Sbjct: 175 SESGSEVFKVDYFDRNAYLA--QSPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHATE 232

Query: 234 FYQLDMEMSFVE-QDDILNTMENVLRGVFEEFSN 266
           F   D+E S++    D++   E +L    +   +
Sbjct: 233 FSGFDLEFSYITSFKDVMKMEEELLTAGLQAVKD 266



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 28/129 (21%)

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
             EF +I D                   F   +            +     YDL+  G E
Sbjct: 332 GHEFLFITD------------YSAEKRAFYHMRDE----------NGVPQGYDLIWRGVE 369

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I +G  R H  EV+ +     G++     +        FQ G PPHGG   GIDR+ MLL
Sbjct: 370 ITTGAQREHRYEVLKKQAEEKGLA-----DDVKFYLEFFQYGCPPHGGFGLGIDRLTMLL 424

Query: 551 LGAKNVREV 559
            G  ++++ 
Sbjct: 425 CGL-SIKDA 432


>gi|326531520|dbj|BAJ97764.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 605

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 61/293 (20%), Positives = 114/293 (38%), Gaps = 13/293 (4%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCID 74
              V L+G V+  R  G  + F D+R      QV+AN +      E  K+     +  I 
Sbjct: 111 DDKVSLAGRVYSKRAMGQKLRFYDLRSESQKVQVMANANFYKSEEEFIKTTERVKLGDIV 170

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G++             TG++ +   +I IL+      +P        +  RF+ R+LDL 
Sbjct: 171 GVL------GQPCRTKTGELSIRPSEIVILTPCL-HQMPHMHYGLKDKETRFRQRYLDLM 223

Query: 135 RDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
            +  + +  V +TRII  +R  +    F+E  TP++            V    +      
Sbjct: 224 MNDWVKQKFVTKTRIIKYLRNFLDNMGFLEVETPLMNMIPGGATAKPFVTYHNDLDMNLF 283

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++   
Sbjct: 284 MRIAPELYLKMLVVGGIDRVYEIGRNFRNEGIDLTHNP-EFTMCEFYMAYADYNDLIEIT 342

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           E  L G+         +  +         +       P  +   ++H++    
Sbjct: 343 ERFLSGLVMHLFGSYKIKYH-PEGPEHPEVEWEIDFTPPFKRFSMIHDLEREC 394



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++L     E+ +     +   V  + F +    KE  +            A +
Sbjct: 469 EPGLTERFELFVGYRELCNSYTELNDPLVQRERFESQAKDKEAGDEEAQPVDENFCTALE 528

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG   GIDR+ M L  + N++EV LFP  +
Sbjct: 529 YGLPPTGGWGCGIDRLTMFLTDSNNIKEVLLFPAMK 564


>gi|168493443|ref|ZP_02717586.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183576419|gb|EDT96947.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 447

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPVAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPVAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|296411579|ref|XP_002835508.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629292|emb|CAZ79665.1| unnamed protein product [Tuber melanosporum]
          Length = 492

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 16/258 (6%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L        V ++GWV  VR    + F  + D   I  + A       E ++++     +
Sbjct: 39  LSDERANETVTVAGWVRSVRRMKNVSFAHVSDGSTIHPLQA---VLTKEQSENLSMGTSV 95

Query: 72  CIDGLVMS-RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            I G        +   +       EL A+K+E+L  A+ L  P+  + + PE +R     
Sbjct: 96  KITGEWKESVGGKGQQSK------ELLAEKVEVLGKADPLTYPLQKKYQTPEFLRTL--- 146

Query: 131 LDLRR--DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           L LR+        +  R+ II+++    +  +FI+C TPI+T+S  EGA +         
Sbjct: 147 LHLRQRIPANTNLLHLRSNIISTLTAFFVEHSFIQCHTPIITSSDCEGAGEVFAIVPEKF 206

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            +         Q     +A+   R + ++P FR E   + R   EFY L++E +F++  D
Sbjct: 207 FNTPKYLTVSGQLHLEALAAAVPRVWTLSPSFRAEKSGTTRHLSEFYMLEVEAAFIDTLD 266

Query: 249 -ILNTMENVLRGVFEEFS 265
            ++  +E++++ +    S
Sbjct: 267 PLVALIEDMVKTIVRSIS 284



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 53/141 (37%), Gaps = 18/141 (12%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             ++ D+P             +  PF M    + ++         A  +DL+     E+ 
Sbjct: 365 PVFVTDYP------------KSLKPFYML-PSVSTVPTPGEGETVAC-FDLLVPAVGELI 410

Query: 493 SGGIRNHMSEVMLQAFSNVGISKE---VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
            G +R +  + +L      GI+       E          + G   HGG   G+DR+V  
Sbjct: 411 GGSLREYRYDELLTEMRRHGIAVGDGGEDEGSLRWYLELRKWGSTRHGGFGLGLDRLVCY 470

Query: 550 LLGAKNVREVSLFPMSQNFCD 570
           L G +N+RE + FP     CD
Sbjct: 471 LAGVENIREATAFPRWVGRCD 491


>gi|295105436|emb|CBL02980.1| Aspartyl/asparaginyl-tRNA synthetases [Faecalibacterium prausnitzii
           SL3/3]
          Length = 444

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 22/274 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT    +   + +G  V++ G++  +R    + F+ ++D  G  Q+           +  
Sbjct: 3   RT-YINEAQKA-IGGTVKVQGFIENLRNSKYMAFIVLKDITGKLQITVEKADHPELVDTI 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-----GE 117
             +  + V+ + G VM       N  +  G +E+  + IE+ S A  LP+         +
Sbjct: 61  DQLTPDSVITVTGKVME------NDYVKMGGVEMIPESIEVESTANALPIVRKEIAATKK 114

Query: 118 REYPE----SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
           ++  E      R  YR++DLR D        ++  +N+MR  ++  NFIE  TP L A++
Sbjct: 115 KKAVERSSIDQRIDYRWIDLRTDENQLMFKAQSCFVNAMRKFLLDRNFIEIHTPKLIAAA 174

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            E   +       ++ ++ A  Q+PQ YKQ+ MA+GF+R F+  P FR E   +++   E
Sbjct: 175 SESGSEVFKVDYFDRNAYLA--QSPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHATE 232

Query: 234 FYQLDMEMSFVE-QDDILNTMENVLRGVFEEFSN 266
           F   D+E S++    D++   E +L    +   +
Sbjct: 233 FSGFDLEFSYITSFKDVMKMEEELLTAGLQAVKD 266



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 28/129 (21%)

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
             EF +I D                   F   +            +     YDL+  G E
Sbjct: 332 GHEFLFITD------------YSAEKRAFYHMRDE----------NGVPQGYDLIWRGVE 369

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I +G  R H  EV+ +     G++     +        FQ G PPHGG   GIDR+ MLL
Sbjct: 370 ITTGAQREHRYEVLKKQAEEKGLA-----DDVKFYLEFFQYGCPPHGGFGLGIDRLTMLL 424

Query: 551 LGAKNVREV 559
            G  ++++ 
Sbjct: 425 CGL-SIKDA 432


>gi|77411588|ref|ZP_00787930.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77162373|gb|EAO73342.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 448

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/305 (20%), Positives = 111/305 (36%), Gaps = 24/305 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I F+ +RD       V   P+             F++ K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKF-------GYELDITDLEVIGESHEYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II S         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             + +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E SF+ 
Sbjct: 185 FGKPAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLS 241

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            ++ L+  E  ++ + +   N    + + L    +   R        +     +  + EH
Sbjct: 242 HEESLDLQEAYVKALIQGVLNRAPQALDILERDVEALKRYIAEPFKRVSYDDAITLLQEH 301

Query: 306 FVHSE 310
               +
Sbjct: 302 EADED 306



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ K      +       + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDDYDALVAKMDELGMDKSE----YDFYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|325695942|gb|EGD37833.1| asparagine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 448

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKF-------GYELDITDIEIIGESNDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F R+ YD+AI      
Sbjct: 242 HDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAIDLLQAH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 302 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVVNYPAAIKAFYMKPVPGNPDRVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 53/140 (37%), Gaps = 26/140 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +++++P             A   F M    G  + +   DLL+ + +         EI
Sbjct: 333 PTFVVNYP------------AAIKAFYMKPVPGNPDRVLCADLLAPEGYG--------EI 372

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R    + ++   + +G+     E          + G  PHGG   GI+R+V  + 
Sbjct: 373 IGGSMREEDYDALVAKMNELGMDTSEYE----FYLDLRKYGTVPHGGFGIGIERMVTFVA 428

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G K++RE   FP   +    
Sbjct: 429 GTKHIREAIPFPRMLHRIKP 448


>gi|225857168|ref|YP_002738679.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|225725202|gb|ACO21054.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 447

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           +G  V +  WV      G I FL +RD       V   P+             F++ K +
Sbjct: 14  IGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|254508217|ref|ZP_05120341.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219548834|gb|EED25835.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 407

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 115/258 (44%), Gaps = 17/258 (6%)

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K ++ ++     G ++        +    G + ++ +  E+L+ A   PLP        +
Sbjct: 3   KELKEKYQGLDIGDIIGVKGALHKSG--KGDLYVNMESYELLTKALR-PLPEKFHGLTDQ 59

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
            +R++ R++DL  +   +   + R+++++++R  M ++ ++E  TP++        AR F
Sbjct: 60  EMRYRQRYVDLIVNEDSRQAFIIRSKLVSAIRNFMSSKGYLEVETPMMHVIPGGATARPF 119

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  
Sbjct: 120 ITHHNALDIDMY-LRVAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFY 177

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGTDKP 291
            ++ +  D+++  E +L  V  +     ++            + R+   +AI+ Y  D  
Sbjct: 178 QAYADYRDLMDLTEEMLSTVAMDVLGSTSMPYGEETVEFGGKYARMSMFEAIKHYNPDHA 237

Query: 292 DLRNPIIMHNVTEHFVHS 309
           +++  +   ++T+     
Sbjct: 238 EIQA-LTEADLTDREKMV 254



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E ++         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 283 EPQLIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 342

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +K+  ++           A + G+PP  G   GIDR+ ML      +R+V LFP 
Sbjct: 343 KAQVDAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFPA 402

Query: 565 SQ 566
            +
Sbjct: 403 MR 404


>gi|148984890|ref|ZP_01818143.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147922912|gb|EDK74028.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301800375|emb|CBW33006.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 447

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            + + +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELDMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|94993952|ref|YP_602050.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|123080131|sp|Q1J7K5|SYN_STRPF RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|94547460|gb|ABF37506.1| Asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 448

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 133/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I F+ +RD       V   P+             F++ K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGHEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +EI+  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKF-------GYELDITDLEIIGESHEYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYATYEFFDQNGFIKFDSPILSENAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             + +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E SF+ 
Sbjct: 185 FGKPAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLS 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            ++ L+  E  ++ + +   +                   ++  F R+ YDDAI      
Sbjct: 242 HEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYITEPFKRVSYDDAITLLQEH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++    ++ + +    G   R  C 
Sbjct: 302 EADEDTDYEHLEHGDDFGSPHETWISNYFGVPTFVVNYPASFKAFYMKPVPGNPERVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 22/136 (16%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ K      +       + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDNYDTLVAKMDELGMDKSE----YDFYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMS 565
           + G K++RE   FP  
Sbjct: 427 VAGTKHIREAIPFPRM 442


>gi|114563340|ref|YP_750853.1| asparaginyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122299607|sp|Q081Q0|SYN_SHEFN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|114334633|gb|ABI72015.1| asparaginyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 466

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 75/391 (19%), Positives = 125/391 (31%), Gaps = 54/391 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    GI FL + D         +P       + +  ++ VL
Sbjct: 12  GEHAVGSQVTVRGWVRTRRDSKAGISFLAVYDGSC-----FDPIQGVLPNSLANYNDDVL 66

Query: 72  CID-GLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYR 129
            +  G  +  + E + +       EL   +I +   V +    P+  +R   E +R    
Sbjct: 67  KLTAGCSVVMTGEVVASPGAGQAFELQVTEIVVTGFVDDPDTYPMSAKRHSIEHLREL-A 125

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L  R + +      R  +  ++      E FI  STP++TAS  EGA +    S ++  
Sbjct: 126 HLRPRTNIIGAVARVRNCLSQAIHRFYHQEGFIWVSTPLITASDCEGAGEMFRVSTLDME 185

Query: 190 --------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                          F+          Q      A    + +   P FR E+  + R   
Sbjct: 186 NLPRTAEGKVDYDKDFFGKESFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTTRHLA 245

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL----------------- 275
           EF+ ++ E++F   DD     E +L+  F           NF                  
Sbjct: 246 EFWMVEPEVAFATLDDAAELAEKMLKFAFSAVLEERMDDLNFFNERVDKTVIERLQAFVS 305

Query: 276 ----RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
               ++ Y DA+             +   +   +EH  +     F   + V    +    
Sbjct: 306 SDFAQVDYTDAVEILKNCGKKFEFAVEWGIDLQSEHERYLAEEHFKAPVVVKNYPKDI-- 363

Query: 330 PAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                   R   D     A     PG+  I 
Sbjct: 364 ---KAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 70/230 (30%), Gaps = 28/230 (12%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406
           +A       LA    +   S  +          N    + +  RL         F   D 
Sbjct: 256 FATLDDAAELAEKMLKFAFSAVLEERMDDLNFFNERVDKTVIERLQAFVSSD--FAQVDY 313

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
                       +  ++        F   W +D      +E E+ +   H    +     
Sbjct: 314 TDAVEIL----KNCGKKF------EFAVEWGIDL----QSEHERYLAEEHFKAPVVVKNY 359

Query: 467 ES------LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
                   ++ ND     A   D++  G  EI  G  R    +V+    + + +S    +
Sbjct: 360 PKDIKAFYMRLNDDGKTVA-AMDVLAPGIGEIIGGAQREERLDVLDARLAEMDLS----Q 414

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             +       + G  PH G   G +R+V  + G  N+R+V  FP +    
Sbjct: 415 EDYWWYRDLRRYGTVPHSGFGLGFERLVSYVTGVNNIRDVIPFPRAPRSA 464


>gi|328948871|ref|YP_004366208.1| asparaginyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328449195|gb|AEB14911.1| Asparaginyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 486

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 101/303 (33%), Gaps = 48/303 (15%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC----------FEI 61
           L        V + GW+  VR    ++F+ + D      +    D              E 
Sbjct: 10  LSSKPESQKVTVCGWIRSVRDSKNLVFIQVNDGSCFANIQLTFDRNSPSPNANVNNIEEE 69

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K + +   +  +GL++S  A           +E++ + ++ L        P+   +   
Sbjct: 70  LKKLNTGASVRAEGLLISSPASGQA-------VEVTLESLKTLGTCNPEEYPLQKNKMSM 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           E +R     L  R +T       R ++  ++        F   + P +T S  EGA +  
Sbjct: 123 EYLR-TNAHLRARTNTFGAVYRVRNQMAFAVHSFFQERGFQYINAPEITCSDCEGAGEMF 181

Query: 182 VPSRVNQG---------------------------SFYALPQA---PQQYKQLLMASGFD 211
             + ++                              F+    +     Q +   MA+   
Sbjct: 182 QVTTLSMEKIAELGVKAGAGGMKIEDAHKIVDYSKDFFGKKASLTVSGQLEAETMATALS 241

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           R +   P FR E+  + R   EF+ ++ EM+F + DD ++  E+ ++ +           
Sbjct: 242 RVYTFGPTFRAENSNTPRHLAEFWMIEPEMAFFDLDDDMDIQEDFVKYLLNWALTKCRSD 301

Query: 272 NNF 274
             F
Sbjct: 302 LEF 304



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 4/87 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    E+  G  R    E +L+A     +      + +       + G  PH G   G 
Sbjct: 403 LVPGIGELIGGSEREENYEKLLKACEERKMDM----SNYQWYLDLRRFGTVPHSGFGLGF 458

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +R++  + G +N+R+V  +P +    D
Sbjct: 459 ERLIRYITGMENIRDVIPYPRAPKLAD 485


>gi|325694754|gb|EGD36660.1| asparagine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 448

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+           A F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEEGLAKFDTIKKL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IEI+  + + P+     +E+     
Sbjct: 75  SQETSVYVTGIVKEDERSKF-------GYELDITDIEIIGESNDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F R+ YD+AI      
Sbjct: 242 HDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAIDLLQAH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 302 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVVNYPAAIKAFYMKPVPGNPDRVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 26/140 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +++++P             A   F M    G  + +   DLL+ + +         EI
Sbjct: 333 PTFVVNYP------------AAIKAFYMKPVPGNPDRVLCADLLAPEGYG--------EI 372

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R    + ++   +++G+     E          + G  PHGG   GI+R+V  + 
Sbjct: 373 IGGSMREEDYDALVAKMNDLGMDTTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFVA 428

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G K++RE   FP   +    
Sbjct: 429 GTKHIREAIPFPRMLHRIKP 448


>gi|209527681|ref|ZP_03276179.1| tRNA synthetase class II (D K and N) [Arthrospira maxima CS-328]
 gi|209491909|gb|EDZ92266.1| tRNA synthetase class II (D K and N) [Arthrospira maxima CS-328]
          Length = 325

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 97/242 (40%), Gaps = 7/242 (2%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R+ G +   R  G I F+ + D     Q+         +   +      L   G  +   
Sbjct: 66  RVCGRITFKRDSGSIGFIGLTDASATIQLKIEKKLVTGDPGLTFNQIKKLLDIGDFIGVE 125

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH-K 140
                 N   G++ +   +++++S A  +P P          +  ++R +DL  +    +
Sbjct: 126 GIGCRTN--RGELSIQVSRLDVISKA-TIPFPDSYYGINDPELCRRHREIDLVSNPTSLQ 182

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
               R+RII S+R  +    F E  TP+L T      AR F+          Y L  A +
Sbjct: 183 RFKLRSRIIRSIRTYLWNAGFDEIETPVLQTIYGGAAARPFITHHNALDIDLY-LRIATE 241

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + +  +  G ++ F+I   FR+E   S   P EF  +++  ++ +   I+  +E+++  
Sbjct: 242 LFLKRAVCGGMEKVFEIGRVFRNEGIDSTHNP-EFTSIEVYQAYADYFQIMALVEDLICA 300

Query: 260 VF 261
           V 
Sbjct: 301 VA 302


>gi|317047577|ref|YP_004115225.1| asparaginyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316949194|gb|ADU68669.1| asparaginyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 466

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 70/388 (18%), Positives = 130/388 (33%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLC 72
           V S V + GWV   R    G+ F+ + D      V A  +++     +    + +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGLSFIAVYDGSCFNPVQAVVNNSLNNYQDEVLRLTTGCSVI 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+    E           EL A ++E++   ++        + +      +   L 
Sbjct: 76  VTGKVVESPGEGQA-------FELQATQVEVVGWVDDPDTYPMAAKRHSIEYLREVAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R + +      R  +  ++        +   STP++TAS  EGA +    S ++  +  
Sbjct: 129 PRTNLIGAVARTRHTLAQALHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDMENLP 188

Query: 193 ALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
             PQ    Y +                    A    + +   P FR E+  + R   EF+
Sbjct: 189 RDPQGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNF 274
            L+ E++F   DD     E +L+ VF+                            V+ +F
Sbjct: 249 MLEPEVAFATLDDAAALAEAMLKYVFKAVLEERADDLAFFAERVDKDAISRLERFVNADF 308

Query: 275 LRICYDDAIRRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            ++ Y DAI        +  NP+    ++ +EH  +   + F   + V    +       
Sbjct: 309 AQVDYTDAIEILLKSGQNFENPVSWGVDLSSEHERYLAEKHFKAPVVVKNYPKDI----- 363

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 364 KAFYMRMNDDGKTVAAMDVLAPGIGEII 391



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    +V+   
Sbjct: 347 EKHFKAPVVVKNYPKDIKAFYMRMNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDAR 406

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + +G++K      +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 407 LAEMGLNK----EDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|94988159|ref|YP_596260.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94992046|ref|YP_600145.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|123257805|sp|Q1JCQ7|SYN_STRPB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123258209|sp|Q1JMN3|SYN_STRPC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|94541667|gb|ABF31716.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94545554|gb|ABF35601.1| Asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 448

 Score =  172 bits (435), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 133/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I F+ +RD       V   P+             F++ K +
Sbjct: 15  VGQEVTIGAWVTNKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +EI+  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKF-------GYELDITDLEIIGESHEYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYATYEFFDQNGFIKFDSPILSENAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             + +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E SF+ 
Sbjct: 185 FGKPAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLS 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            ++ L+  E  ++ + +   +                   ++  F R+ YDDAI      
Sbjct: 242 HEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYITEPFKRVSYDDAITLLQEH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++    ++ + +    G   R  C 
Sbjct: 302 EADEDTDYEHLEHGDDFGSPHETWISNYFGVPTFVVNYPASFKAFYMKPVPGNPERVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 22/136 (16%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ K      +       + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDNYDALVAKMDELGMDKSE----YDFYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMS 565
           + G K++RE   FP  
Sbjct: 427 VAGTKHIREAIPFPRM 442


>gi|301167077|emb|CBW26656.1| asparaginyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 470

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 116/348 (33%), Gaps = 55/348 (15%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHY--GITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            + GW+  +R      F+ I D    G  Q++ +     +E   S+     + I G ++ 
Sbjct: 25  VVKGWIKSIRKSKKFSFMMINDGSCQGDLQIIIDATIENYEEVSSLLIGSSVAITGTLVP 84

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                        ++E+ A+ +EI+  ++E       ++        +   L +R +T  
Sbjct: 85  SGGRG-------QKVEMQAKSVEIIGRSDETYPLQ--KKATSLEFLREQAHLRVRTNTFG 135

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN------------ 187
                R  +  +       + F   ++PI+T+   EGA +    S ++            
Sbjct: 136 AVFRIRHELAQATHRFFSNQGFYYLNSPIITSVDGEGAGEMFRVSGLDAKNPPLNDAGEV 195

Query: 188 --QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                ++    +     Q +    ASG    +   P FR E+  + R   EF+ ++ E++
Sbjct: 196 DFTKDYFGKETSLCVTGQLEGECFASGLGAIYTFGPTFRAENSNTPRHLSEFWMIEPEVA 255

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-------------------------RI 277
           F + DD+     + ++ +  E         NFL                         +I
Sbjct: 256 FADLDDVAKLAGDYIQYMISEVLKNCEDEMNFLVNRHGGNLDESHLEMLKLVRDTPFTKI 315

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHN--VTEHFVHSEFRVFSKILSVNPG 323
            Y +AI            P    N   TEH      + F   + V   
Sbjct: 316 TYTEAIDILNASGESFEFPTTWGNELQTEHERFLAEKHFKGPVIVTDY 363



 Score = 80.9 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 51/150 (34%), Gaps = 26/150 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +      + D+P                 F M Q         D  +++A  
Sbjct: 345 HERFLAEKHFKGPVIVTDYP------------ADCKAFYMKQ-------NPDGKTVRAM- 384

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            D++  G  EI  G  R    +   +  + +       E  +       + G  PH G  
Sbjct: 385 -DVLVPGVGEIIGGSQREEDYD---KIVAKMDKDDMDKEGYW-WYLDLRKYGSVPHAGFG 439

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R +M + G  N+R+V  FP +   CD
Sbjct: 440 LGFERAIMYITGMSNIRDVIPFPRNPGNCD 469


>gi|15674719|ref|NP_268893.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|19745748|ref|NP_606884.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|21909997|ref|NP_664265.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28896306|ref|NP_802656.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|56808340|ref|ZP_00366099.1| COG0017: Aspartyl/asparaginyl-tRNA synthetases [Streptococcus
           pyogenes M49 591]
 gi|71903182|ref|YP_279985.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|71910351|ref|YP_281901.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|94990041|ref|YP_598141.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|139474151|ref|YP_001128867.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|306827725|ref|ZP_07460997.1| asparagine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|54039685|sp|P67576|SYN_STRP3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|54039686|sp|P67577|SYN_STRP8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|54042046|sp|P67575|SYN_STRP1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|122987033|sp|Q1JHS6|SYN_STRPD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123734117|sp|Q48UH6|SYN_STRPM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166232739|sp|A2RFM5|SYN_STRPG RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|13621841|gb|AAK33614.1| putative asparaginyl-tRNA synthetase [Streptococcus pyogenes M1
           GAS]
 gi|19747888|gb|AAL97383.1| putative asparaginyl-tRNA synthetase [Streptococcus pyogenes
           MGAS8232]
 gi|21904186|gb|AAM79068.1| putative asparaginyl-tRNA synthetase [Streptococcus pyogenes
           MGAS315]
 gi|28811557|dbj|BAC64489.1| putative asparaginyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|71802277|gb|AAX71630.1| hypothetical protein M28_Spy0516 [Streptococcus pyogenes MGAS6180]
 gi|71853133|gb|AAZ51156.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|94543549|gb|ABF33597.1| Asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|134272398|emb|CAM30654.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|304430043|gb|EFM33080.1| asparagine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 448

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 133/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I F+ +RD       V   P+             F++ K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +EI+  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKF-------GYELDITDLEIIGESHEYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYATYEFFDQNGFIKFDSPILSENAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             + +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E SF+ 
Sbjct: 185 FGKPAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLS 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            ++ L+  E  ++ + +   +                   ++  F R+ YDDAI      
Sbjct: 242 HEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYITEPFKRVSYDDAITLLQEH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++    ++ + +    G   R  C 
Sbjct: 302 EADEDTDYEHLEHGDDFGSPHETWISNYFGVPTFVVNYPASFKAFYMKPVPGNPERVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 22/136 (16%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ K      +       + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDNYDALVAKMDELGMDKSE----YDFYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMS 565
           + G K++RE   FP  
Sbjct: 427 VAGTKHIREAIPFPRM 442


>gi|315444464|ref|YP_004077343.1| lysyl-tRNA synthetase (class II) [Mycobacterium sp. Spyr1]
 gi|315262767|gb|ADT99508.1| lysyl-tRNA synthetase (class II) [Mycobacterium sp. Spyr1]
          Length = 1101

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 115/260 (44%), Gaps = 18/260 (6%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEI 61
           +H+  +   ++ G+ V +SG V R R +GG++F  +RD    TQV  +     D    + 
Sbjct: 647 SHTIAEAIAAEEGTEVTVSGRVLRARDYGGVLFGQLRDWSAETQVALDNSALLDGTTTDF 706

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            ++V    ++ + G +          +  +G   +   +  ++      PLP   +    
Sbjct: 707 TRTVDLGDLIEVTGTM---------GHTRSGSWSVLVTRWRLIGKCLR-PLPDKWKGLTD 756

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R + R++DL  +T  + ++K R+ I++++R  ++ + F+E  TPIL        AR 
Sbjct: 757 QEARVRARYVDLAVNTDARELIKARSAILHAIRETLVGKGFLEVETPILQQIHGGANARP 816

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FL          Y L  AP+ Y + L   G +R F++   FR+E       P EF  L+ 
Sbjct: 817 FLTHINAYDLDLY-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEA 874

Query: 240 EMSFVEQDDILNTMENVLRG 259
             +  +    ++    +++ 
Sbjct: 875 YQAHADYTVWIDGCRELIQN 894



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 76/223 (34%), Gaps = 36/223 (16%)

Query: 353  QPGLAYIFWRLDESGNVAGMG----PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD--- 405
                +++F+R  E G +  +        K ++   +EA+   +D+    +      D   
Sbjct: 898  AANGSHVFFRPREDGVLEPVDISGRWAVKTVHGAVSEALGEHIDVDTDLATLRRLCDKAG 957

Query: 406  -PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
             P      A      + + L  +     E  +  DFP             + +P T P  
Sbjct: 958  IPYLTHWDAGAVVLEMYEHL--VEDQTTEPTFYKDFP------------TSVSPLTRPHR 1003

Query: 465  GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVEN 520
             +            A ++DLV  G E+ +            +      +           
Sbjct: 1004 SIP---------GVAERWDLVAWGVELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAME 1054

Query: 521  RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                  +A +  MPP GG+  G+DR+VML+ G  ++RE   FP
Sbjct: 1055 LDEDFLQAMEYAMPPTGGLGMGVDRVVMLITGR-SIRETLPFP 1096


>gi|145224128|ref|YP_001134806.1| lysyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|296439666|sp|A4T9U2|LYSX_MYCGI RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|145216614|gb|ABP46018.1| lysyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
          Length = 1101

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 115/260 (44%), Gaps = 18/260 (6%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEI 61
           +H+  +   ++ G+ V +SG V R R +GG++F  +RD    TQV  +     D    + 
Sbjct: 647 SHTIAEAIAAEEGTEVTVSGRVLRARDYGGVLFGQLRDWSAETQVALDNSALLDGTTTDF 706

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            ++V    ++ + G +          +  +G   +   +  ++      PLP   +    
Sbjct: 707 TRTVDLGDLIEVTGTM---------GHTRSGSWSVLVTRWRLIGKCLR-PLPDKWKGLTD 756

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R + R++DL  +T  + ++K R+ I++++R  ++ + F+E  TPIL        AR 
Sbjct: 757 QEARVRARYVDLAVNTDARELIKARSAILHAIRETLVGKGFLEVETPILQQIHGGANARP 816

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FL          Y L  AP+ Y + L   G +R F++   FR+E       P EF  L+ 
Sbjct: 817 FLTHINAYDLDLY-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEA 874

Query: 240 EMSFVEQDDILNTMENVLRG 259
             +  +    ++    +++ 
Sbjct: 875 YQAHADYTVWIDGCRELIQN 894



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 76/223 (34%), Gaps = 36/223 (16%)

Query: 353  QPGLAYIFWRLDESGNVAGMG----PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD--- 405
                +++F+R  E G +  +        K ++   +EA+   +D+    +      D   
Sbjct: 898  AANGSHVFFRPREDGVLEPVDISGRWAVKTVHGAVSEALGEHIDVDTDLATLRRLCDKAG 957

Query: 406  -PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
             P      A      + + L  +     E  +  DFP             + +P T P  
Sbjct: 958  IPYLTHWDAGAVVLEMYEHL--VEDQTTEPTFYKDFP------------TSVSPLTRPHR 1003

Query: 465  GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVEN 520
             +            A ++DLV  G E+ +            +      +           
Sbjct: 1004 SIP---------GVAERWDLVAWGVELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAME 1054

Query: 521  RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                  +A +  MPP GG+  G+DR+VML+ G  ++RE   FP
Sbjct: 1055 LDEDFLQAMEYAMPPTGGLGMGVDRVVMLITGR-SIRETLPFP 1096


>gi|319946940|ref|ZP_08021174.1| asparagine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319746988|gb|EFV99247.1| asparagine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 454

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F+  K +
Sbjct: 21  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 80

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 81  SQETSVFVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 130

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 131 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 190

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 191 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 247

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD+AI      
Sbjct: 248 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDEAIDLLQEH 307

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 308 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPDRVLCA 367

Query: 343 RM 344
            +
Sbjct: 368 DL 369



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  + +   DLL+ + +         EI  G +R    + ++    
Sbjct: 345 YPAAIKAFYMKPVPGNPDRVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKME 396

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           ++G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 397 SLGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 452

Query: 570 DL 571
             
Sbjct: 453 KP 454


>gi|296876373|ref|ZP_06900425.1| asparagine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296432663|gb|EFH18458.1| asparagine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 448

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 75  SQETSVFVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD+AI      
Sbjct: 242 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDEAIDLLQEH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 302 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVINYPADIKAFYMKPVPGNPDRVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++    ++G+ +   E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREEDYDALVAKMESLGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
             G K++RE   FP   +    
Sbjct: 427 AAGTKHIREAIPFPRMLHRIKP 448


>gi|209559094|ref|YP_002285566.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|209540295|gb|ACI60871.1| Asparaginyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 448

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 133/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I F+ +RD       V   P+             F++ K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +EI+  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKF-------GYELDITDLEIIGESHEYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYATYEFFDQNGFIKFDSPILSENAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             + +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E SF+ 
Sbjct: 185 FGKPAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLS 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            ++ L+  E  ++ + +   +                   ++  F R+ YDDAI      
Sbjct: 242 HEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYITEPFKRVSYDDAITLLQEH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++    ++ + +    G   R  C 
Sbjct: 302 EADEDIDYEHLEHGDDFGSPHETWISNYFGVPTFVVNYPASFKAFYMKPVPGNPERVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 22/136 (16%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ K      +       + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDNYDALVAKMDELGMDKSE----YDFYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMS 565
           + G K++RE   FP  
Sbjct: 427 VAGTKHIREAIPFPRM 442


>gi|227496387|ref|ZP_03926675.1| possible lysyl-tRNA synthetase [Actinomyces urogenitalis DSM 15434]
 gi|226834072|gb|EEH66455.1| possible lysyl-tRNA synthetase [Actinomyces urogenitalis DSM 15434]
          Length = 457

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/252 (25%), Positives = 101/252 (40%), Gaps = 10/252 (3%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           S V ++G V  +R HGG+IF  +RD  G  QV+ +   A  E   S R    +     V 
Sbjct: 16  SPVTVAGRVMSLRDHGGVIFASLRDWSGDLQVLLDAGGAGQECLASFRRLVRIGDQVAVT 75

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDT 137
                + N     G   L A    + S A   PLP          +R + R L L     
Sbjct: 76  GAPGASRN-----GTPSLVASSWTMTSKALR-PLPNKHRGLQDPEMRVRQRHLALIISSR 129

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
             + +V R+  I ++R  ++   ++E  TP+L        AR F           Y L  
Sbjct: 130 DRRMLVARSHAIQAVRSTLLQRGYLEVETPMLHPVHGGANARPFRTHINAYDLDLY-LRI 188

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + LM +G DR F+I   FR+E   +   P EF  L+   S+ +   +   ++++
Sbjct: 189 APELYLKRLMVAGADRVFEIGRSFRNEGADATHNP-EFTMLEAYQSYADYTVMKEVVQDL 247

Query: 257 LRGVFEEFSNGN 268
                +      
Sbjct: 248 AVHAAKAALGTT 259



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 68/183 (37%), Gaps = 20/183 (10%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW-----IMDFPFYEWNEEEKK 451
           D+     G+P+   +         A  L +     ++  W     +     YE   E   
Sbjct: 285 DAVAEHLGEPVDASTSLGTL-QAFADRLNL----AYDPAWGWGTLVQH--LYEHLAEGTT 337

Query: 452 IDFAHNPFTMPQGGMESL-KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                  FT        L + +  L + A ++DL+  G E+ +         +  +  + 
Sbjct: 338 AQPTF--FTDFPAETSPLTRPHRSLPLLAERWDLIIFGSEVGTAYSELVDPVLQRERLTA 395

Query: 511 VGIS----KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             ++                +A + GMPP GG+  G+DR+VM+L GA ++RE   FP+ +
Sbjct: 396 QSLAAAGGDPEAMELDEAFLQALEQGMPPTGGLGVGLDRLVMMLTGA-SIRETITFPLVR 454

Query: 567 NFC 569
              
Sbjct: 455 PGK 457


>gi|321262346|ref|XP_003195892.1| lysine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317462366|gb|ADV24105.1| Lysine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 630

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 56/267 (20%), Positives = 116/267 (43%), Gaps = 19/267 (7%)

Query: 14  VSDVGSFVRLSGWVHRVR-PHGGIIFLDIR-DHYGITQVVANPDSACFEIA----KSVRS 67
            + + + + L+G V+ +R     + F D++ D   +  +    ++   E        +R 
Sbjct: 149 TAQLDNPISLAGRVYTIRESSSKLRFYDLKADGVKVQIMAQAQNATSLEEYLNTHDRIRR 208

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             ++ + G         + +    G++ LS   I++LS    L     G        R++
Sbjct: 209 GDIIGVTG---------VPSRTKMGELSLSISSIQLLSPCLHLLPGREGV--VDLETRYR 257

Query: 128 YRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            R+LDL  +   +   V R+++IN +R  + A+ F+E  TP+++  +        V    
Sbjct: 258 KRYLDLIMNPSTRDIFVTRSKVINYIRKYLDAQGFLEVETPMMSMIAGGATAKPFVTHHN 317

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           +      L  AP+ Y + L+  G DR F+I   FR+E       P EF   +  M++ + 
Sbjct: 318 DLKLDLFLRIAPELYLKELVVGGLDRVFEIGRVFRNEQIDMTHNP-EFSICEFYMAYADM 376

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNN 273
            DI++  E ++ G+ +  + G  ++ +
Sbjct: 377 YDIMDMTEELIEGMVKSLTGGTKLTFH 403



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++      EI +     +      + F      KE  +    G       A +
Sbjct: 510 RPGLCERFEAFICTKEICNAYTELNDPFDQRERFMEQVKQKEQGDEEAQGVDETFLDALE 569

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG   GIDR+VM L    N++EV LFP  +
Sbjct: 570 YGLPPTGGWGLGIDRLVMFLTDCSNIKEVLLFPAMR 605


>gi|307706198|ref|ZP_07643015.1| asparaginyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307618388|gb|EFN97538.1| asparaginyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 447

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F+I K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFLEKFGEEVGLEKFDIIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            ++ L+  E  ++ + +   +                   +S  F RI YD AI      
Sbjct: 241 HNESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYISEPFKRISYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|213403358|ref|XP_002172451.1| cytoplasmic aspartate-tRNA ligase Drs1 [Schizosaccharomyces
           japonicus yFS275]
 gi|212000498|gb|EEB06158.1| cytoplasmic aspartate-tRNA ligase Drs1 [Schizosaccharomyces
           japonicus yFS275]
          Length = 579

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 75/319 (23%), Positives = 129/319 (40%), Gaps = 30/319 (9%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQ--VVANPDSACFEIAK- 63
           +  D+  +  G  V +   V+  R  G  + F  +R  +   Q  VV N ++   ++ K 
Sbjct: 94  NISDISAAKDGEKVLIRARVYTSRLQGNKMCFFALRQKFSTVQGLVVVNKETISKQMVKF 153

Query: 64  --SVRSEWVLCIDGLVMSRSAETINANIITGQIELS-------------------AQKIE 102
             S+  E ++ ++G+V        +  +   +I++S                   A+  +
Sbjct: 154 CGSIPLETIILVEGIVKKSPELIKSTTVQDVEIQISSVFVVSSVKKQLPFLVEDAARSEQ 213

Query: 103 ILSVAEELPLPVFGE-REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENF 161
            +  +EE       +        R   R LDLR  T       +  I  + R  ++   F
Sbjct: 214 QIKASEESAKEGDSKFVRVLLDTRLDNRVLDLRTPTNQAIFQIQAGICRAFRDYLLNSKF 273

Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
            E  TP +T +S EG  +       N   +  L Q+PQ YKQ+L+A+ FDR F+I P FR
Sbjct: 274 TEIHTPKMTGASSEGGSNVFSIKYFNSTGY--LSQSPQLYKQMLIAADFDRVFEIGPVFR 331

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
            E+  + R   EF  LD+EM+F E   +++  +EN+   +F       +     +R  Y 
Sbjct: 332 AEESNTYRHMTEFTGLDLEMAFDEHYHEVMGFIENLFLHIFRVLKTEYSEQVAIVRRQYP 391

Query: 281 DAIRRYGTDKPDLRNPIIM 299
                   D+  LR     
Sbjct: 392 SE-DFLIPDQAPLRFHFKE 409



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 14/119 (11%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   +  PF TMP                +  YD    G EI SG  R H  E++++  +
Sbjct: 471 KYPASARPFYTMPDPEDPRY---------SNSYDFFMKGQEIMSGAQRIHDPELLVERMN 521

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            +G+    +++       AF+ G  PH G   G++R++M  L   N+R  S FP     
Sbjct: 522 ALGVDPNGLKD----YIDAFRLGCVPHAGGGIGLERVLMFYLNLPNIRLASAFPRDPKR 576


>gi|148264997|ref|YP_001231703.1| asparaginyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|189083272|sp|A5G5R2|SYN_GEOUR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|146398497|gb|ABQ27130.1| asparaginyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 461

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/288 (22%), Positives = 113/288 (39%), Gaps = 27/288 (9%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIA 62
           RT     L  S  G  + L GWV  VR    + FL I D   +T  QVV  P    ++  
Sbjct: 4   RTRVSAALAASRPGEELVLKGWVRTVRVGKDVTFLAINDGSCMTSLQVVVEPALPNYQDV 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             + +   + + G++    A          + EL+A+++EI+  A++   P+  +R   E
Sbjct: 64  CRIGTGSAVAVRGILRESPAAG-------QKYELAAEELEIIGPADD-SYPLQKKRHSFE 115

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R     L  R +T       R+ +  ++        F+   TPI+TA+  EGA +   
Sbjct: 116 YLR-TIAHLRPRTNTFGAVFRVRSSLAQAVHRFFAERGFLYVHTPIITANDCEGAGELFR 174

Query: 183 PSRVNQ-------------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
            + ++              G F+A         Q +  L A  F   +   P FR E+  
Sbjct: 175 VTTLDMARPPLAAGEVDYSGDFFAQATGLTVSGQLEGELFAQAFSDIYTFGPTFRAENSN 234

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           + R   EF+ ++ E++F +        E+ L+ +     +       F
Sbjct: 235 TARHAAEFWMIEPELAFADLMADAALAEDFLKFLCRHVLDNCGEDMAF 282



 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    LV    EI  G  R    +++L+  + +GI+    E+       +
Sbjct: 363 MRQNDDGKTVAAMDLLVPKVGEIIGGSQREERLDLLLERMAQMGIN----EDGLWWYLDS 418

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++M L G +N+R+V  FP +  
Sbjct: 419 RRWGSCPHAGFGLGFERLLMYLTGMENIRDVIPFPRTPR 457


>gi|319744609|gb|EFV96959.1| asparagine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 448

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 62/305 (20%), Positives = 111/305 (36%), Gaps = 24/305 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I F+ +RD       V   P+             F++ K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKF-------GYELDITDLEVIGESHEYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II S         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             + +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E SF+ 
Sbjct: 185 FGKPAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLS 241

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            ++ L+  E  ++ + +   +    + + L    +   R        +     +  + EH
Sbjct: 242 HEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYIAEPFKRVSYDDAITLLQEH 301

Query: 306 FVHSE 310
               +
Sbjct: 302 EADED 306



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+     ++ +       + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDNYDALVAKMDELGM----AKSEYDFYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|270292428|ref|ZP_06198639.1| asparagine--tRNA ligase [Streptococcus sp. M143]
 gi|270278407|gb|EFA24253.1| asparagine--tRNA ligase [Streptococcus sp. M143]
          Length = 447

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 130/362 (35%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F+  K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALEILERDTELLKRYIAEPFKRITYDQAIDLLREH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDADADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|308186276|ref|YP_003930407.1| asparaginyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308056786|gb|ADO08958.1| asparaginyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 466

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 72/426 (16%), Positives = 139/426 (32%), Gaps = 62/426 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    G+ F+ + D      V A  +++       V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGLSFIAVYDGSCFNPVQAVVNNSLNNYQDEV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A  +E++   E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASPGQGQAFEIQATSLEVVGWVEDPDSYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++        +   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDMENLPRND 191

Query: 189 -------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      AS   + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFSEDFFGKEAFLTVSGQLNGETYASALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   DD     E +L+ VF                             ++ +F ++
Sbjct: 252 PEIAFASLDDAAALAEAMLKYVFNAVLEERADDMAFFAERVDKDAVERLQRFITTDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+   +   +EH  +   + F   + V    +          
Sbjct: 312 DYTDAVEILMNCGQTFENPVSWGIDLSSEHERYLAEQHFKAPVVVKNYPKDI-------- 363

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
             +AF  R+NE        G       +   G    +G   +   +   +A    + +  
Sbjct: 364 --KAFYMRLNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLEEMGLNK 414

Query: 396 GDSCFF 401
            D  ++
Sbjct: 415 EDYWWY 420



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      +G++K      +      
Sbjct: 370 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARLEEMGLNK----EDYWWYRDL 423

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 424 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|168491566|ref|ZP_02715709.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|225859297|ref|YP_002740807.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|183574309|gb|EDT94837.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|225720590|gb|ACO16444.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 447

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPVAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPVAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|261330188|emb|CBH13172.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 584

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 17/256 (6%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSAC---FEIAKSVRSEWVL 71
           +   V ++G +   R     + FL ++ D   +  +    D       +I   ++   ++
Sbjct: 109 LDKVVTIAGRIVVKRSSSSKLHFLALQGDGEVLQVISMASDYVNDGFADIHSKIKRGDII 168

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G         + +   TG+  +SA +I +LS      LP           RF+ R+L
Sbjct: 169 GVRG---------VPSLSNTGEFSMSAYEITLLSTC-FHMLPDEHYGLSSVEQRFRQRYL 218

Query: 132 DLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL  +    K  + R++II+ +R     ++F+E  TP+L   +   A    +        
Sbjct: 219 DLIVNRENAKTFILRSKIISYIRSFFDQKDFLEVETPMLNQIAGGAAARPFITHHNELNQ 278

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  AP+ Y + L+  G DR ++I   FR+E       P EF  ++   ++ + +D +
Sbjct: 279 TMYLRIAPELYLKKLVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTSVESYWAYADYNDWM 337

Query: 251 NTMENVLRGVFEEFSN 266
            T E +L G+      
Sbjct: 338 ETTEELLYGMVMHLYG 353



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 5/111 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
            + +++L  N  EI +     +   V  + F      +E  ++       G  +A +  +
Sbjct: 469 LSERFELFINKKEICNSYTELNSPLVQREEFERQLRDREKGDDEAMDIDEGYVQALEYAL 528

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQ 583
           PP GG   GIDR+VM L    N++EV LFP M           P T+   Q
Sbjct: 529 PPTGGWGLGIDRLVMYLTSQNNIKEVLLFPAMKPEGTSSATFPPGTMLNGQ 579


>gi|313904374|ref|ZP_07837751.1| asparaginyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313470710|gb|EFR66035.1| asparaginyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 464

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 117/357 (32%), Gaps = 51/357 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIAKSVRSEWV 70
               + + +++ GWV   R      FL + D      +      +   F    S+     
Sbjct: 14  RDKYLNTKIKVGGWVRNNRASKNFGFLVLHDGTFFDTLQIVYGAELDNFSGLSSLNIGTA 73

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G ++                E+ A+ + +   +     P+  +R   E +R     
Sbjct: 74  VIVEGTLVPTPE-------AKQPFEIQAESVVVEGES-TPDYPLQKKRHTVEFLRTIQ-H 124

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++       +F+   TP++T+S  EGA +    + ++   
Sbjct: 125 LRPRTNLFQATYRVRSLCAYAIHKFFQENDFVYVHTPLITSSDAEGAGEMFQVTTLDLNN 184

Query: 190 -------------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+  P       Q      A  F + +   P FR E+  + R   E
Sbjct: 185 IPKNEDGSVDFSQDFFKKPTNLTVSGQLYGETYAQAFRKIYTFGPTFRAENSNTTRHAAE 244

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ E++F +  D ++  E +L+ +            NF                   
Sbjct: 245 FWMIEPEIAFADLQDDMDCAEAMLKYIIRYVLENAPEEMNFFNQFVDKGLLDRLNHVMNS 304

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVW 327
              R+ Y +AI+       +    +       TEH  +   +VF K + V    +  
Sbjct: 305 DFGRVTYTEAIKLLEEHNDEFEYKVSWGCDLQTEHERYLTEQVFKKPIFVTDYPKDI 361



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 52/139 (37%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P        K I      F M        K ND     A    LV    EI 
Sbjct: 350 KPIFVTDYP--------KDIKA----FYM--------KLNDDGKTVAAADCLVPGIGEII 389

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + + Q    +G+      +++       + G   H G   G +R VM L G
Sbjct: 390 GGSQREEDYDKLKQRMEELGMDM----SQYDFYLDLRKFGTTRHAGFGLGFERCVMYLTG 445

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+R+V  FP + N CDL
Sbjct: 446 VSNIRDVLPFPRTVNHCDL 464


>gi|325847832|ref|ZP_08170054.1| asparagine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480850|gb|EGC83903.1| asparagine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 462

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 63/356 (17%), Positives = 118/356 (33%), Gaps = 51/356 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVL 71
              +   +   GW+ + R    + F+++ D       QVV   D   FE  +       L
Sbjct: 11  EKYIDQEITAQGWIRQARFTKNVGFIELNDGTIFKNLQVVVGKDLENFESIQKEHLSASL 70

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G       + +  N      EL A K+E+L  ++E       ++            L
Sbjct: 71  KVIG-------KLVKTNNAKQAYELQANKVEVLGHSDENFPIQKQKQ--SLEYMRTIPHL 121

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
            +R +T       R+++  ++        FI  + P++TAS  EGA +    +  N    
Sbjct: 122 RVRTNTYRAVFRLRSKLAYALHKFFQEREFIYLNAPLITASDTEGAGEMFQVTTQNLEKP 181

Query: 190 ------------SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q +    A      +   P FR E+  + R   EF
Sbjct: 182 NLDKDGKVDYSKDFFGKKSYLTVSGQLEAEDYALALSNIYTFGPTFRAEESNTPRHAAEF 241

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + L+ E++F + +  ++  E +++ + E           F                    
Sbjct: 242 WMLEPELAFADYNVCMDVAEEMMKYMIEYVLENCKDEIEFFNERIDDTLIERLTKVKNAK 301

Query: 276 --RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
             RI Y DAI +      D   P+   +   TEH  +   ++    + V    +  
Sbjct: 302 FARITYTDAIEKLKNADVDFEYPVEWGIDLQTEHERYLSEKIVDGPVFVTDYPKDI 357



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 54/136 (39%), Gaps = 26/136 (19%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             ++ D+P        K I      F M        + ND  ++ A  +D++     E+ 
Sbjct: 347 PVFVTDYP--------KDIKA----FYMR-------RNNDGKTVAA--FDMLVPAVGELI 385

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + ++++  + G+  +  +          + G   H G   G +R VM L G
Sbjct: 386 GGSQREERYDELVKSMEDNGLKIDEYQ----NYLDLRKYGTVVHSGYGLGFERAVMYLTG 441

Query: 553 AKNVREVSLFPMSQNF 568
            KN+R+V  +P + N 
Sbjct: 442 MKNIRDVIPYPRTVNS 457


>gi|225028942|ref|ZP_03718134.1| hypothetical protein EUBHAL_03232 [Eubacterium hallii DSM 3353]
 gi|224953717|gb|EEG34926.1| hypothetical protein EUBHAL_03232 [Eubacterium hallii DSM 3353]
          Length = 460

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 107/353 (30%), Gaps = 51/353 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
               +   V+L GW+  +R      FL + D       QVV       F+    +     
Sbjct: 10  SEQFLNKEVKLGGWIRSIRGSKHFGFLVLHDGTFFKPIQVVYEEKLENFQEISKMNVGAA 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G ++                E+ A  + +   +         ++ +          
Sbjct: 70  VIVEGTLVPTPQ-------AKQPFEIQAATVTLEGASAPDYPLQ--KKRHSLEYLRTISH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R+    ++        F+   TP++TAS  EGA +    + ++   
Sbjct: 121 LRPRTNTFQAVFRIRSMAAYAIHQFFQERGFVYVHTPLITASDCEGAGEMFQVTTLDLNN 180

Query: 190 -------------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+  P       Q      A  F   +   P FR E+  + R   E
Sbjct: 181 IPKDKEGNVDFAQDFFNKPTNLTVSGQLNAETFAQAFRNTYTFGPTFRAENSNTARHAAE 240

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------ 275
           F+ ++ EM+F +  D +   E +L+ V            +FL                  
Sbjct: 241 FWMIEPEMAFADLKDDMEVAEAMLKYVISYVMENAPEEMDFLNQFVDKGLKDRLNHVLNS 300

Query: 276 ---RICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
               + Y +A+             +       TEH  +    VF + + V   
Sbjct: 301 EFGHVTYTEAVEILEKHNDKFEYKVSWGTDLQTEHERYLTEEVFKRPVFVTDY 353



 Score = 84.0 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 54/150 (36%), Gaps = 24/150 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +         ++ D+P     +E K        F M           D  ++ A  
Sbjct: 335 HERYLTEEVFKRPVFVTDYP-----KEIK-------AFYMK-------LNPDGKTVAAMD 375

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    E++ +    VG+     E ++       + G   H G   
Sbjct: 376 C-LVPGIGEIIGGSQREDDYEMLKKRMEEVGLD----EEKYQFYLDLRKYGSTHHSGFGL 430

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R VM L G  N+R+   FP + N C+L
Sbjct: 431 GFERCVMYLTGISNIRDAIPFPRTVNNCEL 460


>gi|77408513|ref|ZP_00785250.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77172870|gb|EAO76002.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 448

 Score =  171 bits (434), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 62/305 (20%), Positives = 111/305 (36%), Gaps = 24/305 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I F+ +RD       V   P+             F++ K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKF-------GYELDITDLEVIGESHEYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II S         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             + +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E SF+ 
Sbjct: 185 FGKPAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLS 241

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            ++ L+  E  ++ + +   +    + + L    +   R        +     +  + EH
Sbjct: 242 HEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYIAEPFKRVSYDDAITLLQEH 301

Query: 306 FVHSE 310
               +
Sbjct: 302 EADED 306



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ K      +       + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDNYDALVAKMDELGMDKSE----YDFYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|326791659|ref|YP_004309480.1| asparaginyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326542423|gb|ADZ84282.1| asparaginyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 463

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 66/365 (18%), Positives = 119/365 (32%), Gaps = 57/365 (15%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            ++GWV  VR      F+++ D      +        FE       E      G  +  +
Sbjct: 22  TVAGWVRTVRDSKTFGFIEVNDGTFFKSLQI-----VFEDTLENFKEVAKLGVGAAIIVT 76

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            + +         EL A +I I         P+  +R   E +R +  +L  R +T    
Sbjct: 77  GDLVMTPNQKQPFELKATQIVIEGEC-PPEYPLQKKRHSFEYLR-QIAYLRPRTNTFGAV 134

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------------- 188
              R+    ++       +F+   TP++TAS  EGA +    + ++              
Sbjct: 135 FRVRSLAAYAIHKFFQERSFVYAHTPLITASDCEGAGEMFRVTTLDPVHPPKTENGEVDF 194

Query: 189 -GSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              F+    +     Q      A  F   +   P FR E   + R   EF+ ++ E++F 
Sbjct: 195 KEDFFGKMASLTVSGQLSAETFAMAFRDVYTFGPTFRAEKSNTPRHAAEFWMIEPEIAFA 254

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RICYDDAI 283
           + +D +   E++++ V             F                      R+ Y +A+
Sbjct: 255 DLEDDMRLAEDMVKFVINYVLENAKEEMAFFNQFVDKGILERLQGVASADFGRVTYTEAV 314

Query: 284 RRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
           +           P+       TEH  +     F K + V    +            +AF 
Sbjct: 315 QILEKCGKKFEYPVYWGCDLQTEHERYLTEEHFKKPVFVTNYPKEI----------KAFY 364

Query: 342 DRMNE 346
            RMNE
Sbjct: 365 MRMNE 369



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ ++P     +E K        F M           D  ++ A  
Sbjct: 338 HERYLTEEHFKKPVFVTNYP-----KEIK-------AFYMRMNE-------DGKTVAAM- 377

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  E+  G  R    EV+L+  + +G+     E  +       + G   H G  
Sbjct: 378 -DLLVPGIGELIGGSQREERLEVLLERMAELGLK----EEDYWWYLDLRRFGGTRHAGFG 432

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R++M L G  N+R+V  FP +
Sbjct: 433 LGFERLIMYLTGMTNIRDVIPFPRT 457


>gi|168051607|ref|XP_001778245.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670342|gb|EDQ56912.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 525

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 112/276 (40%), Gaps = 23/276 (8%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRD-HYGITQVVANPDSACFE-IAKSV 65
           + GDLG    G  V + G VH VR  G + FL +R+  + +  V A  ++   + + K V
Sbjct: 66  NVGDLGQDHSGQTVLVRGRVHTVRGKGSLGFLVVREAGHTVQCVAAVKENVVSKGMIKYV 125

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA------------EELPLP 113
                  I  +              +  +EL   KI  +S A                  
Sbjct: 126 GKLNKESIVDVEGVVVVPPKPVEGTSQPVELHVSKIYCISKAAVQLPINLEDAARSELDL 185

Query: 114 VFGERE------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
             GE+E        +  R   R +DLR          + ++    R  ++ ENF+E  TP
Sbjct: 186 QKGEQEGIQYVRVGQDTRLNNRVIDLRTPANQAIFRIQCQVSALFRQALLDENFVELHTP 245

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            L A + EG           +G    L Q+PQ +KQ+ + + F R F+I P FR ED  +
Sbjct: 246 KLIAGASEGGSSVFKLDY--KGQPACLAQSPQLHKQMAICADFGRVFEIGPVFRAEDSFT 303

Query: 228 DRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFE 262
            R   EF  LD EM   E   ++L+ +E V   +F+
Sbjct: 304 HRHLCEFTGLDFEMEIKEHYFEVLDVLEKVFLTIFD 339



 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 58/162 (35%), Gaps = 22/162 (13%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
               AD      + LG +    ++     DF          +      PF       +  
Sbjct: 386 VDPMADFNTETEKTLGKLVKERYK----TDFYVLH------RYPSGIRPFYTMPCWDD-- 433

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
                    +  +D+   G EI SG  R H  E++ +  +  GI  +           +F
Sbjct: 434 ------KSYSNSFDVFIRGEEIISGAQRIHDPELLTKRATECGIDVKS----LTTYIDSF 483

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G PPHGG   G++R+VML     N+R+ SLFP        
Sbjct: 484 RYGAPPHGGAGVGLERVVMLFCALNNIRKTSLFPRDPQRLAP 525


>gi|118383039|ref|XP_001024675.1| aspartyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|89306442|gb|EAS04430.1| aspartyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 604

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 67/285 (23%), Positives = 117/285 (41%), Gaps = 39/285 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-----SACFEIAKSVR 66
           +  S VG  V +   +   R  G + FL +R  +   Q + + +         +    V 
Sbjct: 139 IDESMVGQTVLIRARLQNSRVKGNVGFLVLRQQFSTIQAMISKNDVTVSKTMVKWVGKVP 198

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA------------------E 108
            E ++ + G+V     E  + +     +EL   K+ ++S +                  E
Sbjct: 199 CESIVDVYGVVSKPETEIKSTSCK---LELIVNKVYVVSRSRAQLPFQLEDAARQQKKEE 255

Query: 109 ELPLPVFGEREYPES----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA 158
           +L      E +  ES           R   R +DLR          ++ I    R  +++
Sbjct: 256 QLAEYNNNEGDIEESKDNQASVSIKTRLDNRIIDLRTPAKQAIFRLQSGICQLFREYLLS 315

Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
           ++F+E  TP L   S EG  +       ++ +   L Q+PQ YKQ+ + S F+R F+I P
Sbjct: 316 QDFVEIHTPKLIGGSSEGGANIFKLKYFDKDA--CLAQSPQLYKQMCIQSDFERVFEIGP 373

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMENVLRGVFE 262
            FR E   + R   EF  LD+EMS  E   ++L+ M ++   +F+
Sbjct: 374 VFRAEKSFTHRHMCEFTGLDIEMSIKENYHELLDLMGDLFVHIFK 418



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 74/219 (33%), Gaps = 33/219 (15%)

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            GL   + +  E+  +    P          +   V+L  ++G      AG      +  
Sbjct: 418 KGLETKYSKEIEA--IQQQFP----FEPFKIKTPVVKLTFEEGCKLLKEAG---IEQNPL 468

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGN 472
            D      ++LG I    ++     DF          +   +  PF TM      +    
Sbjct: 469 EDLDTVTEKKLGDIVREKYD----TDFYMLH------RYPISARPFYTMLCHDDPNY--- 515

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                    YD    G EI SG  RNH    + +  +  GI+ E +++       +   G
Sbjct: 516 ------TLSYDFFMRGQEITSGAQRNHDPVSLAKRAAECGINVETIKD----YIESMAFG 565

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             PHGG   G++R+V L     ++R   LFP        
Sbjct: 566 AYPHGGCGIGLERVVFLYCDLYDIRNGCLFPRDPKRIAP 604


>gi|322387310|ref|ZP_08060920.1| asparagine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321141839|gb|EFX37334.1| asparagine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 447

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F+  K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVFVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD+AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDEAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVINYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKME 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           ++G+     E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 SLGMDLTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|120404304|ref|YP_954133.1| lysyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|296439672|sp|A1TAC7|LYSX_MYCVP RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|119957122|gb|ABM14127.1| lysyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 1100

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 117/258 (45%), Gaps = 18/258 (6%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEI 61
           +H+      ++ G+ V ++G V R R +GG++F  +RD  G TQ+V +     D +  + 
Sbjct: 646 SHTVAQALAAEDGADVAVAGRVLRSRDYGGVLFAQLRDWSGETQLVLDNSLLADGSTADF 705

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            +++    ++ + G +             +G+  L      ++      PLP   +    
Sbjct: 706 TRTIDLGDLIEVTGTM---------GRSRSGKWSLLVSGWRLIGKCLR-PLPDKWKGLTD 755

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
           +  R + R++DL  +T  + +++ R+ +++++R  ++A++F+E  TPIL        AR 
Sbjct: 756 QEARVRARYVDLAVNTDARELIRARSAVLHAIRETLVAKDFLEVETPILQQIHGGANARP 815

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           FL          Y L  AP+ Y + L   G +R F++   FR+E       P EF  L+ 
Sbjct: 816 FLTHINAYDLDLY-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEA 873

Query: 240 EMSFVEQDDILNTMENVL 257
             +  +    ++    ++
Sbjct: 874 YQAHADYHVWIDGCRELI 891



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 61/188 (32%), Gaps = 28/188 (14%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
            +    E I    D+         AG P      A      + + L  +     E  +  D
Sbjct: 932  SEALGEQIGPDTDLATLRLLCDRAGIPYLTHWDAGAVVLELYEHL--VEDQTREPTFYKD 989

Query: 440  FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
            FP             + +P T P   +            A ++DLV  G E+ +      
Sbjct: 990  FP------------TSVSPLTRPHRSIP---------GVAERWDLVAWGVELGTAYSELT 1028

Query: 500  MSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                  +      +                 +A +  MPP GG+  G+DR+VML+ G  +
Sbjct: 1029 DPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRVVMLITGR-S 1087

Query: 556  VREVSLFP 563
            +RE   FP
Sbjct: 1088 IRETLPFP 1095


>gi|73984267|ref|XP_533339.2| PREDICTED: similar to Aspartyl-tRNA synthetase (Aspartate--tRNA
           ligase) (AspRS) isoform 1 [Canis familiaris]
          Length = 481

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 83/368 (22%), Positives = 145/368 (39%), Gaps = 41/368 (11%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKS 64
             DL V      V +   VH  R  G   FL +R        +  V  +      + A +
Sbjct: 48  VSDLTVHKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAAN 107

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E ++ ++G+V  R       +     +EL  QKI ++S+AE        +   PE  
Sbjct: 108 INKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEVE 165

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
             +         T       ++ I +  R  +I + F+E  TP + +++ EG  +    S
Sbjct: 166 GEE-------TSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVS 218

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   EF  LD+EM+F 
Sbjct: 219 YFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFN 276

Query: 245 EQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF------LRICYDDAIRRY- 286
                  ++I +T+  + +G+ + F       N       F      LR+ Y +A+    
Sbjct: 277 YHYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLR 336

Query: 287 -----GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVWAIPAKGGGGNR 338
                  D+ DL  P    +  + +    ++F +  K  L+V P Y +          + 
Sbjct: 337 EAGIEMGDEEDLSTPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFYTMPDPRNPKQSNSY 396

Query: 339 AFCDRMNE 346
               R  E
Sbjct: 397 DMFMRGEE 404



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 325 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYD----TDFYILD------KY 374

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 375 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 425

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 426 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 481


>gi|168178430|ref|ZP_02613094.1| aspartyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670401|gb|EDT82375.1| aspartyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 429

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 15/254 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              + L GW+H++R    I FL IRD  G+ Q + + D         V+ E ++ + G+V
Sbjct: 14  NEKINLQGWIHKIRKLRNITFLIIRDRSGLIQCIVDNDKL---DLSQVKIESIVSLTGVV 70

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYPESIRFKYRFLDLRR 135
              +             E+  + +EI++ A +       +   E         R L LR 
Sbjct: 71  RESTNALNP-------FEIQVENLEIINAALDKVPIEINKENLEINLDTMLNNRILSLRH 123

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             ++     +  I+N  R  +  E F E  TP +     EG  +          ++ A  
Sbjct: 124 PKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFENTAYLA-- 181

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTME 254
           Q+PQ YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+E+ F+E + DI+   E
Sbjct: 182 QSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDEKDIMEVEE 241

Query: 255 NVLRGVFEEFSNGN 268
            +L+ + E+ +   
Sbjct: 242 RLLKFILEKLNKEC 255



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 80/213 (37%), Gaps = 16/213 (7%)

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  DE   +     + K +     +  +   D+ D +     +  P      A D   
Sbjct: 227 IGFIEDEKDIMEVEERLLKFILEKLNKECKEYFDLLDSELPKIESEIPKITFKEALDILI 286

Query: 419 HIAQELGI---INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
               +  +   ++    +          ++ +E+   DF     T        +    L 
Sbjct: 287 KEYNKNNLTCDLDPEGEKLI-------CKYAKEKLDSDFIFL--TNYPREKRPMYTMPLG 337

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
                 +DL+  G EI +GG R H   +++      G + +  E+       AF+ GMP 
Sbjct: 338 KDGTHSFDLLFRGIEITTGGQRIHGYNMLVDNMEFKGFNPKDYES----YLSAFKYGMPK 393

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           HGG+A G++R+   LLG +NVRE +L    +  
Sbjct: 394 HGGLAIGLERLTSRLLGLENVREAALITRDRTR 426


>gi|308463696|ref|XP_003094120.1| CRE-NARS-1 protein [Caenorhabditis remanei]
 gi|308248532|gb|EFO92484.1| CRE-NARS-1 protein [Caenorhabditis remanei]
          Length = 545

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/298 (20%), Positives = 114/298 (38%), Gaps = 24/298 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
            V      V +  WVHR+R  G  ++FL +RD YG  Q V N        A ++ +E  +
Sbjct: 116 SVKHREQRVTIKAWVHRIRRQGKSLMFLVLRDGYGFIQCVLNDKLCQSYDAVTLSTESSI 175

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G++ +               EL+    E++  A    +     ++    +    R L
Sbjct: 176 QVYGVIKALPDG----KDAPDGHELTVDYWELIGAAPAGGIDNVLNKDAGVDVMLDNRHL 231

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   + +  R     +MR    A  + E + P L  +  EG           + ++
Sbjct: 232 VIRGENASRILRIRAAATRAMRDHFFAAGYTEVTPPTLVQTQVEGGSTLFGLDYYGEPAY 291

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A      + IA  +R E  R+ R   E+  ++ E +F+  D +++
Sbjct: 292 --LTQSSQLYLETCNA-ALGDVYCIAQSYRAEKSRTRRHLSEYQHVEAECAFITFDQLMD 348

Query: 252 TMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            +E+++    +                      S  F R+ Y +AI     +  D+RN
Sbjct: 349 RIESLVCDTVDRLLADPVTKGLIEFVNPGYKPPSRPFKRMAYKEAIAWLQEN--DVRN 404



 Score = 70.5 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 42/116 (36%), Gaps = 13/116 (11%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAF 508
            +       F MP+   +               DL+  G  EI  G +R      ML AF
Sbjct: 435 NRFPAGIKAFYMPRCADD--------KELTESVDLLMPGVGEIVGGSMRIWQESEMLAAF 486

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              GI        +       + G  PHGG   G++R +  L    ++R+V L+P 
Sbjct: 487 ERAGIDP----KNYFWYMDQRKYGSVPHGGYGLGLERFICWLTDTHHIRDVCLYPR 538


>gi|315613513|ref|ZP_07888420.1| asparagine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315314204|gb|EFU62249.1| asparagine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 447

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 130/362 (35%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F+  K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  I+ +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIVYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTDLLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKME 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|163786312|ref|ZP_02180760.1| lysyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159878172|gb|EDP72228.1| lysyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 562

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 65/336 (19%), Positives = 129/336 (38%), Gaps = 17/336 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G +  +   G   F  ++D  G  QV  N D  C    KS+ ++    +  L 
Sbjct: 46  GKQVIVAGRLMAINVQGKASFAQLQDSEGRIQVYFNRDEICTGEDKSLYNDVFKKLIDLG 105

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY------PESIRFKYRFL 131
                E        G+  +  ++ ++LS A +       +             R++ R+ 
Sbjct: 106 DFVGIEGELFTTKVGEKTIMVREFKLLSKALKPLPIPKQKDGVTYDAFTDPEQRYRQRYA 165

Query: 132 DLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQG 189
           DL  +   K   +KRT++ N+MR       + E  TPIL        AR F+        
Sbjct: 166 DLAVNPHVKEVFIKRTKLFNAMRQFFNDAGYFEVETPILQPIPGGAAARPFITHHNSLDI 225

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
             Y +  A + Y + L+  GFD  ++ +  FR+E       P EF  +++ +S+ + + +
Sbjct: 226 PLY-MRIANELYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNP-EFTAMEIYVSYKDYNWM 283

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           ++  E +L       +  +  +    +I +          +  +R+ I+     + +  S
Sbjct: 284 MDFCEQLLEHCAIAVNGTSEATFGEHKINFKAP-----YKRITMRDSILEFTGFDIYNKS 338

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
           E  +  +  +     EV     KG   +  F ++  
Sbjct: 339 EDEI--RAAARGMHIEVDETMGKGKLIDEIFGEKCE 372



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 5/123 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P+      K +        +++L+  G EIA+     +      + F
Sbjct: 372 EGNYIQPTFITDYPKEMSPLCKEHRENPELTERFELMVCGKEIANAYSELNDPIDQRERF 431

Query: 509 SNVGISKEVVENRF-----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +     +  ++           RA + GMPP  G+  G+DR++M L   ++++EV  FP
Sbjct: 432 EHQLKLAQKGDDEATEFIDHDFLRALEYGMPPTSGMGIGMDRLIMFLTNNQSIQEVLFFP 491

Query: 564 MSQ 566
             +
Sbjct: 492 QMR 494


>gi|197294580|ref|YP_001799121.1| Lysyl-tRNA synthetase (class II) [Candidatus Phytoplasma
           australiense]
 gi|226736752|sp|B1VA97|SYK_PHYAS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|171853907|emb|CAM11870.1| Lysyl-tRNA synthetase (class II) [Candidatus Phytoplasma
           australiense]
          Length = 497

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 59/309 (19%), Positives = 116/309 (37%), Gaps = 26/309 (8%)

Query: 6   THSCGD--LGVSDVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           +H+  +  L   ++           V+++G +   R  G   FL ++D     QV    D
Sbjct: 34  SHTIENIILNYQNIDQEWFEENKVNVKIAGRIILKRGQGKAGFLHLQDFNFKIQVYLRSD 93

Query: 56  --SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
                F + ++     ++ I G               T ++ + A     L+ + +    
Sbjct: 94  LLGDAFLLYQNCDLGDIVGIKG---------FLFKTKTKELTIKALDFIHLTKSLKPLPD 144

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS 172
            F   +  E +R K R+LDL  +   + +   R+ II S+R     E F+E  TPIL  S
Sbjct: 145 KFHGLQNREEMR-KKRYLDLMVNEKSRQVFLTRSLIIKSIRNFFDNEGFLEVETPILQPS 203

Query: 173 -SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                A+ F+         FY L  A +   + L+  G  + ++I   FR+E   +   P
Sbjct: 204 LGGASAKPFITSHNALNSDFY-LRIATELPLKKLIVGGMPKVYEIGRIFRNEGMDATHNP 262

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF  ++   ++ +   ++   +  L+ + +       ++    +I +    +   TD  
Sbjct: 263 -EFSTIEAYQAYSDIQGMMELTQKCLQYICQTVLKSLEINYQNKKISFQTFQKISMTDAI 321

Query: 292 DLRNPIIMH 300
                I   
Sbjct: 322 KKETGIDFQ 330



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++L   G E  +     +      + F N    KE+ ++           A   GMP
Sbjct: 398 TDRFELFIAGKEFVNAFSELNDPIEQEKRFLNQLKQKELGDDEACEMDYDFLDALSYGMP 457

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG+  GIDRIVMLL    N+R+V LFP
Sbjct: 458 PTGGLGMGIDRIVMLLTDTPNIRDVILFP 486


>gi|22536704|ref|NP_687555.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|25010641|ref|NP_735036.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76787521|ref|YP_329308.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|76799395|ref|ZP_00781548.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77413700|ref|ZP_00789883.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|54039684|sp|P67574|SYN_STRA5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|54042045|sp|P67573|SYN_STRA3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123602188|sp|Q3K2E5|SYN_STRA1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|22533546|gb|AAM99427.1|AE014216_3 asparaginyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|23094995|emb|CAD46216.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76562578|gb|ABA45162.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|76585247|gb|EAO61852.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77160245|gb|EAO71373.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 448

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 62/305 (20%), Positives = 111/305 (36%), Gaps = 24/305 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I F+ +RD       V   P+             F++ K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKF-------GYELDITDLEVIGESHEYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II S         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             + +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E SF+ 
Sbjct: 185 FGKPAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLS 241

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            ++ L+  E  ++ + +   +    + + L    +   R        +     +  + EH
Sbjct: 242 HEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYIAEPFKRVSYDDAITLLQEH 301

Query: 306 FVHSE 310
               +
Sbjct: 302 EADED 306



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ K      +       + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDDYDALVAKMDELGMDKSE----YDFYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|34849431|gb|AAP58930.1| asparagine/asparaginyl-tRNA synthetase [Spiroplasma kunkelii
           CR2-3x]
          Length = 455

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 56/267 (20%), Positives = 100/267 (37%), Gaps = 19/267 (7%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHY---GITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           S V + GWV   R  G + FL + D      +  V      A F    S+R    + + G
Sbjct: 16  SEVTILGWVRSNRSSGKLGFLVMNDGTFFNNVQIVYKAEKLANFLAISSLRISSAIKVVG 75

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
                 +            E+ A  IEIL  A E       ++E+      +   L  + 
Sbjct: 76  KFCVTPS-------AKQTFEIQASVIEILDDASEDYPLQ--KKEHSYEYLREIPHLRAKT 126

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS----RVNQGSF 191
           +T +     R+    ++       NFI   TPI+T +  EGA +  + +          F
Sbjct: 127 NTFNAVFRIRSSSSFAIHEFFNKNNFIYVHTPIITGNDAEGAGESFIVTTRTDNNYNEDF 186

Query: 192 YALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           +    +     Q      A  F   +   P FR E+  + R   EF+ ++ E+SF++ ++
Sbjct: 187 FGKKASLTVSGQLHAEGFAQAFRNVYTFGPTFRAENSNTTRHAAEFWMIEPEISFIDLEE 246

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFL 275
            +  +E +++ +       N    +FL
Sbjct: 247 NMTLIEKMIKHIIIYLFINNHYELDFL 273



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   DL+  G  E+  G +R +  + +    + + I    ++          +
Sbjct: 360 NDDNKTVA-ACDLLVPGIGELVGGSVRENDYDKIFSRCNELKIPTTDLQ----WYIDLRK 414

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G     G   G +R +M + G  N+R+V  FP +  
Sbjct: 415 YGYYKSAGFGLGFERFIMYVTGMTNIRDVIPFPRTPR 451


>gi|169836894|ref|ZP_02870082.1| lysyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 501

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 119/290 (41%), Gaps = 15/290 (5%)

Query: 5   RTHSCGDLG---VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           RTH+C  +     +  G  V + G V  +R  G + F+ +RD  G  Q+  +        
Sbjct: 32  RTHTCYQIVNDFENLEGKEVSVVGRVMNLRKFGKLAFIVLRDSSGQVQLFLHGPDVTELD 91

Query: 62  AKSV---RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           AK       +  L   G  +  +   I     TG+I +  +++ +L+ +         E+
Sbjct: 92  AKRGILGMKQLSLLDSGDYLQATGIVI--KTKTGEISVGVRELRLLTKSLRPIP----EK 145

Query: 119 EYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG- 176
              +  RF+ R+LD+  +  + +  ++R++   + R  +    FIE +TP+L  ++    
Sbjct: 146 LENKEERFRRRYLDMNVNQEVRQRFIRRSKFWQATRDFLNNNGFIEINTPVLEYTTGGAD 205

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A  F+          + L  + +   + L+ +GF++ + + P FR+ +  SD    E   
Sbjct: 206 ANPFVTYMDALDKQQFYLRISQELPLKRLIGAGFEKVYDLGPRFRN-ESYSDEHLPEHIA 264

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           ++   ++ +     + ME++ + V +E       +     I        +
Sbjct: 265 MEWYAAYWDWQKGRSFMEDMYKYVLKETFGTLKFNIKGFDIDMGREWEVW 314



 Score = 47.4 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/247 (12%), Positives = 72/247 (29%), Gaps = 40/247 (16%)

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG-----MGPVAKHLNIVNTEAIRVRLD 392
           R+F + M ++   +    L +     D               +AKH  I         + 
Sbjct: 278 RSFMEDMYKYVLKETFGTLKFNIKGFDIDMGREWEVWDYAEVIAKHYYIDVYNTTIEEVT 337

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            +  ++   +               + + +    I  +     W+++ P +         
Sbjct: 338 KKLKENNLEVKKTDSIPRGI-----DKLWKN---IRKDVTGPVWLVNTPKF--------- 380

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
                        +     ++ L++   ++  V  G E+ +G    +     L  F+   
Sbjct: 381 ----------ISPLAKSNVDNPLAV--ERFQPVIAGTELGNGYSELNDPIDQLNRFTEQQ 428

Query: 513 ISKEVVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             ++  ++             + GMPP  G     +R+     G    RE   FP  ++ 
Sbjct: 429 AMRDAGDDEAMMLDIDFVEMLEYGMPPTCGWGY-SERVFWTFEGVTA-REGVPFPHLKHE 486

Query: 569 CDLLMGS 575
            D    +
Sbjct: 487 IDESTKA 493


>gi|327350292|gb|EGE79149.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 971

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 73/365 (20%), Positives = 140/365 (38%), Gaps = 27/365 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH-YGITQVVANP----DSACFEIAKSV 65
           +    +G  V     VH +R     ++F+ +R     I  V+A       +   + A+ +
Sbjct: 157 VTPDSIGQEVTFRARVHHIRNMSSKLVFIILRQQITTIQGVLAEKPGAISTLMIQWAEHI 216

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP---- 121
           R   ++ + G++           I    +E+  Q + ++   ++       E E P    
Sbjct: 217 RVGSIVKVKGVLTKSKVPVTGTTIH--DVEIDIQGLHVIVHRQDQIPFSVYEAELPSKDV 274

Query: 122 ----------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
                     +  R   R LDLR DT       ++ + N  R  + A+ FIE  TP L +
Sbjct: 275 SSDGRRNHVLDRTRLSNRILDLRTDTSQSIFRIQSAVSNLFRSSLDAQGFIEIHTPKLQS 334

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           S+ E            + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R  
Sbjct: 335 SATESGASVFEVKYFTREAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHL 392

Query: 232 GEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
            E+  LD+EM+  E   + L  +++VL+ +F+          N ++  +      +  + 
Sbjct: 393 TEYTGLDIEMAIEEHYHEALEIVDSVLKEIFKGIYGRYRREVNIIKNQFPHEDLVWLDET 452

Query: 291 P--DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           P       I + N +      E    ++ L       +  +  +    +    D+  + A
Sbjct: 453 PIIPFTEGIKLLNESGWRRDGEELPINEDLGTRDEIRLGELIKEKYHTDYFILDKFPKAA 512

Query: 349 RSQGQ 353
           R    
Sbjct: 513 RPFYA 517



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 27/170 (15%)

Query: 404 GDPLKFCSFAADARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           G+ L         R+ I   LG +I        +I+D           K   A  PF   
Sbjct: 473 GEELPINEDLG-TRDEI--RLGELIKEKYHTDYFILD-----------KFPKAARPFYAM 518

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           +                  +D+   G EI SGG R H  +++ +   +VGI+   +E   
Sbjct: 519 ED--------PENPDFTNSFDIFVRGQEIVSGGQRIHDEKILEKRMKDVGINPATMEE-- 568

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
                 F+   PPH G   G++R++ML+L   N+R  SLF         +
Sbjct: 569 --YMEGFRWAAPPHAGAGIGLERLIMLILKLGNIRLASLFHRDPKSFQDM 616


>gi|218283447|ref|ZP_03489447.1| hypothetical protein EUBIFOR_02037 [Eubacterium biforme DSM 3989]
 gi|218215829|gb|EEC89367.1| hypothetical protein EUBIFOR_02037 [Eubacterium biforme DSM 3989]
          Length = 451

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 59/371 (15%), Positives = 126/371 (33%), Gaps = 45/371 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIAKSVRSEWVL 71
               G  V L GWV   R    + F+ + D    + V      +   F+    + +   +
Sbjct: 11  EQYDGQSVTLQGWVRTNRNSKAVGFIALNDGTTFSNVQVVYGENLENFDEVSKITTGSAM 70

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G ++                E+ A+ + +L + +    P+  +R   E +R +   +
Sbjct: 71  EVTGKLVCTPD-------AKQPFEIQAENVCVLGLCD-HDYPLQKKRHSFEFMR-EIPHV 121

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR----VN 187
             R +T +     R+ +  ++        F+  +TP +T +  EGA +    +       
Sbjct: 122 RPRANTYYAMFRLRSVLSMAIHTFFQDRGFVYVNTPEITGNDAEGAGECFTVTTREDAKY 181

Query: 188 QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              F+   A      Q      A  +   +   P FR E+  + R   EF+ ++ E++F 
Sbjct: 182 DKDFFGKHAQLTVSGQLHVEPFALAYRNVYTFGPTFRAENSNTTRHASEFWMIEPELAFA 241

Query: 245 EQDDILNTMENVLRGVFEEFSNG---------------------NTVSNNFLRICYDDAI 283
           +  D ++ +E +++                              +  +++F R+ Y  AI
Sbjct: 242 DLADNMDCIEEMIKYCINYCLEHAKEEMEFFASMIDKECIKRVTHVANSSFERMTYTKAI 301

Query: 284 RRYGTDKPDLRNPII---MHNVTEHFVHSEFRVFSKIL---SVNPGYEVWAIPAKGGGGN 337
                 K    N  I   M   +EH  +   +V +  +         + + +        
Sbjct: 302 EYLEKAKDQFENQDIFWGMDLQSEHERYICEKVVNGPVFLTDYPKDIKAFYMRINDDNKT 361

Query: 338 RAFCDRMNEWA 348
            A CD +  + 
Sbjct: 362 VAACDLLVPYV 372



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V++     +G+     +          + 
Sbjct: 356 NDDNKTVAACDLLVPYVGELVGGSQREERYDVLVNRMKEMGME----QETLQWYLDLRRF 411

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G   H G   G DR++M L G  N+R+V  +P +  
Sbjct: 412 GGCKHSGFGLGFDRMLMYLSGVANIRDVQPYPRTPR 447


>gi|156060031|ref|XP_001595938.1| hypothetical protein SS1G_02152 [Sclerotinia sclerotiorum 1980]
 gi|154699562|gb|EDN99300.1| hypothetical protein SS1G_02152 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 610

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 57/325 (17%), Positives = 123/325 (37%), Gaps = 24/325 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA-----NPDSACFEIAKS-V 65
           G  D    +R+   ++  R  G  ++F D++      QV+         +  FE     +
Sbjct: 118 GEHDKNVEIRVGARIYNKRASGNKLVFYDVKTRDTKIQVMCQLQESREGALAFEKQHEPL 177

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           R   V+ I G     + ++       G++ + A +I +L+   +     +   +     R
Sbjct: 178 RRGDVIGIVGYPGRTAPKSKIEKGEEGELSIFATEIILLTPCVQQLPDEYYGFK-DHEKR 236

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
            + R+LDL  +   + ++K R++++  +R      +F E  TP++ + +           
Sbjct: 237 HRQRYLDLIMNDSSRKVLKTRSKMVRYIRNYFDDRDFDEVETPMMNSIAGGATAKPFKTH 296

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             +      +  AP+ Y ++L+  G DR +++   FR+E       P EF   +  M++ 
Sbjct: 297 HNDLNMDMFMRIAPELYLKMLVVGGMDRVYEMGRQFRNEGIDLTHNP-EFTTCEFYMAYA 355

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNV 302
           +  D ++  E ++ G+ +  + G T   +                 P  R  +I  +   
Sbjct: 356 DVYDTMDMTEELVSGLVKHITGGTTTKFH----TQHGEEYEVNWAAPWKRIEMIPALEEA 411

Query: 303 T--------EHFVHSEFRVFSKILS 319
           T        E         F ++L 
Sbjct: 412 TGEKFPPADELHNDESNEFFKRVLK 436



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 42/126 (33%), Gaps = 10/126 (7%)

Query: 444 EWNEEE--KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           E+ EE          +P  M                   +Y+      EI +     +  
Sbjct: 458 EFIEETCINPTFITEHPKMMSPLAKHHRSKP----GLCERYEAFVCKKEIVNAYTELNDP 513

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F      K+  ++          RA + G+PP  G   GIDR+VM L    +++
Sbjct: 514 FEQRLRFEEQARQKDQGDDEAQMIDENFCRALEFGLPPTAGWGMGIDRLVMFLTDNYSIK 573

Query: 558 EVSLFP 563
           EV  FP
Sbjct: 574 EVLTFP 579


>gi|72392387|ref|XP_846994.1| lysyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62359357|gb|AAX79796.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70803024|gb|AAZ12928.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 584

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 17/256 (6%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSAC---FEIAKSVRSEWVL 71
           +   V ++G +   R     + FL ++ D   +  +    D       +I   ++   ++
Sbjct: 109 LDKVVTIAGRIVVKRSSSSKLHFLALQGDGEVLQVISMASDYVNDGFADIHSKIKRGDII 168

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G         + +   TG+  +SA +I +LS      LP           RF+ R+L
Sbjct: 169 GVRG---------VPSFSNTGEFSMSAYEITLLSTC-FHMLPDEHYGLSSVEQRFRQRYL 218

Query: 132 DLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL  +    K  + R++II+ +R     ++F+E  TP+L   +   A    +        
Sbjct: 219 DLIVNRENAKTFILRSKIISYIRSFFDQKDFLEVETPMLNQIAGGAAARPFITHHNELNQ 278

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  AP+ Y + L+  G DR ++I   FR+E       P EF  ++   ++ + +D +
Sbjct: 279 TMYLRIAPELYLKKLVVGGLDRVYEIGKQFRNEGIDLTHNP-EFTSVESYWAYADYNDWM 337

Query: 251 NTMENVLRGVFEEFSN 266
            T E +L G+      
Sbjct: 338 ETTEELLYGMVMHLYG 353



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 5/111 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
            + +++L  N  EI +     +   V  + F      +E  ++       G  +A +  +
Sbjct: 469 LSERFELFINKKEICNSYTELNSPLVQREEFERQLRDREKGDDEAMDIDEGYVQALEYAL 528

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQ 583
           PP GG   GIDR+VM L    N++EV LFP M           P T+   Q
Sbjct: 529 PPTGGWGLGIDRLVMYLTSQNNIKEVLLFPAMKPEGTSSATFPPGTMLNGQ 579


>gi|157151520|ref|YP_001450575.1| asparaginyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157076314|gb|ABV10997.1| asparaginyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 465

 Score =  171 bits (433), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F+  K +
Sbjct: 32  VGKEVTIGAWVANKSGKGKIAFLQLRDGSAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 91

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  + + P+     +E+     
Sbjct: 92  SQETSVFVTGIVKEDERSKF-------GYELDITDIEVIGESNDYPITP---KEHGTDFL 141

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 142 MDNRHLWLRSRKQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 201

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 202 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 258

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F R+ YD+AI      
Sbjct: 259 HDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEAIDLLQAH 318

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G  +R  C 
Sbjct: 319 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVVNYPAAIKAFYMKPVPGNPDRVLCA 378

Query: 343 RM 344
            +
Sbjct: 379 DL 380



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 26/140 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +++++P             A   F M    G  + +   DLL+ + +         EI
Sbjct: 350 PTFVVNYP------------AAIKAFYMKPVPGNPDRVLCADLLAPEGYG--------EI 389

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R    + ++   +++G+     E          + G  PHGG   GI+R+V  + 
Sbjct: 390 IGGSMREEDYDALVAKMNDLGMDTTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFVA 445

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G K++RE   FP   +    
Sbjct: 446 GTKHIREAIPFPRMLHRIKP 465


>gi|227486700|ref|ZP_03917016.1| asparagine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235288|gb|EEI85303.1| asparagine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 462

 Score =  171 bits (433), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 69/369 (18%), Positives = 122/369 (33%), Gaps = 57/369 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
           V   V + GW+   R    + F+++ D       QVV   +   ++          LC++
Sbjct: 14  VDKEVTIEGWIRNSRFSKNVGFIELNDGSTFKNLQVVVGKEIENYDELDKQNLSASLCVE 73

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G  ++      N        E+ A K+ +L  + E   P+  +R+  E +R     L  R
Sbjct: 74  GKFVAT-GNNKNP------YEIQATKVIVLGESSE-KFPIQKQRQTFEFMR-TIPHLRPR 124

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS---- 190
            +T       R+ +   +       +F+  + PI+TAS  EGA +    + ++       
Sbjct: 125 TNTYRAVFRLRSILAFGLHKFFQERDFVYVNPPIITASDAEGAGEMFNVTTIDPNDPPRR 184

Query: 191 ----------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+   A      Q +    A  F   +   P FR E   + R   EF+ L
Sbjct: 185 EDGKVDYNKDFFSKKAYMTVSGQLEAEDYALAFGNVYTFGPTFRAEVSNTPRHAAEFWML 244

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + EM+F + +  ++T E +++   +           F                      R
Sbjct: 245 EPEMAFADYNVCMDTAEAMIKYAIDYILENAKDEMEFFNQWIDKGLIERLTKLRNSEFAR 304

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           I Y  AI            P+   M   TEH  +   ++      V+    V   P    
Sbjct: 305 ITYTKAIELLKESGEKFEFPVEWGMDLQTEHERYLSEKI------VDGPVFVTDYPKDIK 358

Query: 335 GGNRAFCDR 343
                  D 
Sbjct: 359 AFYMKRNDD 367



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 12/160 (7%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID---FAHNPFTMPQGGMES---L 469
           AR    + + ++  +  +F + +++      E E+ +         F            +
Sbjct: 303 ARITYTKAIELLKESGEKFEFPVEWGMDLQTEHERYLSEKIVDGPVFVTDYPKDIKAFYM 362

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           K ND     A  +D++  G  E+  G  R    + ++++  + G+  E  +         
Sbjct: 363 KRNDDGKTVA-AFDMLVPGVGELIGGSQREERYDELVKSMIDNGLKPEEYQ----NYLDL 417

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            + G   H G   G +R +M + G KN+R+V  +P   N 
Sbjct: 418 RRFGTVVHSGFGLGFERAMMYVTGMKNIRDVIAYPRYVNA 457


>gi|268530758|ref|XP_002630505.1| C. briggsae CBR-KRS-1 protein [Caenorhabditis briggsae]
          Length = 571

 Score =  171 bits (433), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 109/264 (41%), Gaps = 10/264 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
                   V ++G +H  R  G  ++F DI       Q++AN      ++     +    
Sbjct: 97  NEQVADEIVSVAGRIHSKRESGSKLVFYDIHGEGTHIQIMANARFHTGDV--DFVTLHDR 154

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++  +          G++ L  +++  L+      LP        + +RF+ R+L
Sbjct: 155 IKRGDIVGFTG--QATRTKAGELSLIPKEVLQLTPCL-HMLPHSHFGLKDKELRFRKRYL 211

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQG 189
           DL     +  N V R++II  +R  +    F+E  TPI+   +    A+ F+        
Sbjct: 212 DLILNPRVKDNFVIRSKIITFLRRYLDNLGFLEVETPIMNQIAGGATAKPFITHHNDLDM 271

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           + + L  AP+ Y ++L+  G DR +++   FR+E       P EF   +  M++ + +D+
Sbjct: 272 NLF-LRVAPELYHKMLVVGGIDRVYEVGRLFRNEGIDLTHNP-EFTTCEFYMAYADYEDV 329

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN 273
           +   E++L  +         +  +
Sbjct: 330 IQLTEDLLSSMVLAIKGTYKIEYH 353



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 4/95 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++L     EIA+     +      Q F      K+  ++           A + 
Sbjct: 460 PGLTERFELFAVTREIANAYTELNDPITQRQRFEQQAKDKDAGDDEAQMIDETFCNALEY 519

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP GG   GIDR+ M+L    N++EV LFP  +
Sbjct: 520 GLPPTGGWGMGIDRLSMILTDNNNIKEVLLFPAMR 554


>gi|77405446|ref|ZP_00782539.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77175939|gb|EAO78715.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 448

 Score =  171 bits (433), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 62/305 (20%), Positives = 111/305 (36%), Gaps = 24/305 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPDS----------ACFEIAKSV 65
           VG  V +  WV      G I F+ +RD       V   P+             F++ K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGIEKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  + E P+     +E+     
Sbjct: 75  NQETSVYVTGIVKEDERSKF-------GYELDITDLEVIGESHEYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II S         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             + +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E SF+ 
Sbjct: 185 FGKPAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLS 241

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            ++ L+  E  ++ + +   +    + + L    +   R        +     +  + EH
Sbjct: 242 HEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYIAEPFKRVSYDDAITLLQEH 301

Query: 306 FVHSE 310
               +
Sbjct: 302 EADED 306



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ K      +       + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDDYDALVAKMDELGMDKSE----YDFYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|221195832|ref|ZP_03568885.1| asparaginyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221184306|gb|EEE16700.1| asparaginyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 467

 Score =  171 bits (433), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 118/364 (32%), Gaps = 51/364 (14%)

Query: 5   RTHSCGDLGVSDV--GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RT        ++   G+ V ++GWV  VR      F+ + D      +    +       
Sbjct: 3   RTKIAALYADAEQLGGTEVTVAGWVRSVRDMKNFGFVTLNDGSCFKDLQVVMNREICANY 62

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            +V S  V    G  +               IEL A  I I   +     P+  +R+  E
Sbjct: 63  DAVASCGV----GAALIIHGVLELTLERPQPIELQAHTIAIEGASSP-EYPMQKKRQSLE 117

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +   L  R +        R+    ++      + F+  +TPI+T S  EGA +   
Sbjct: 118 YLRTQQ-HLRPRTNLFRAVFRVRSVAAYAIHKFFQDQGFVYVNTPIITTSDAEGAGEMFQ 176

Query: 183 PSRVNQG--------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
            + ++                 F+   A      Q +    A  F   +   P FR E+ 
Sbjct: 177 VTTLDLENIPRTDAGKVDYTQDFFDTSAHLTVSGQLQAENFAMAFGDVYTFGPTFRAENS 236

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS-------------- 271
            + R   EF+ ++ EM+F +    ++  E +L+ V                         
Sbjct: 237 NTRRHAAEFWMIEPEMAFCDLAQDMDIAEAMLQYVISYVLEHCADELEMLNKFVDKGLLE 296

Query: 272 -------NNFLRICYDDAIRRYGT---DKPDLRNPII--MHNVTEHFVHSEFRVFSKILS 319
                  + F R+ Y DAI               P+   +   TEH  +   + F K + 
Sbjct: 297 RLHHVATSEFARVSYTDAISILEEAISQGEKFNYPVKWGIDLQTEHERYLTEKHFKKPVF 356

Query: 320 VNPG 323
           V   
Sbjct: 357 VTDY 360



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 24/144 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P                 F M        + ND     A  
Sbjct: 342 HERYLTEKHFKKPVFVTDYP------------AEIKAFYM--------RTNDDGKTVAAA 381

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    +V+ Q   ++ +       ++       + G   H G   
Sbjct: 382 DCLVPGIGEIIGGSQREERLDVLEQRIKDLDMDP----EQYKYYLDLRRYGSCTHSGFGL 437

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +R+VM L G  N+R+V   P +
Sbjct: 438 GFERLVMYLTGVDNIRDVIPHPRT 461


>gi|322373087|ref|ZP_08047623.1| asparagine--tRNA ligase [Streptococcus sp. C150]
 gi|321278129|gb|EFX55198.1| asparagine--tRNA ligase [Streptococcus sp. C150]
          Length = 448

 Score =  171 bits (433), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 71/365 (19%), Positives = 131/365 (35%), Gaps = 47/365 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-----------NPDSACFEIA 62
              VG  + +  WV      G + FL +RD     Q V               +  F + 
Sbjct: 12  PKHVGEEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVVFKPNFIEKYGEEEGTEKFNVV 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + + G+V                 EL    ++++  +E+ P+     +E+  
Sbjct: 72  KHLSQETSVYVTGVVKEDERSKF-------GYELDVTAVKVIGKSEDYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                 R L LR          R  II +         FI+  +PIL+ ++ E + +   
Sbjct: 122 DFLMDNRHLWLRSRKQMAIQQIRNAIIYATYDFFDKNGFIKFDSPILSGNAAEDSTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S
Sbjct: 182 TDYFGTPAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRY 286
           F+  D+ L+  E  ++ + +   +                   ++  F R+ YD+AI   
Sbjct: 239 FLSHDESLDLQEAYVKALIQGVIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEAIDLL 298

Query: 287 G-------TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
                   TD   L +     +  E ++ + F V + +++    ++ + +    G   R 
Sbjct: 299 QAHENDEDTDYEHLEHGDDFGSPHETWISNYFGVPTFVVNYPASFKAFYMKPVPGNPERV 358

Query: 340 FCDRM 344
            C  +
Sbjct: 359 LCADL 363



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ +   E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDDYDALVAKMDELGMDRTEYE----FYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|207109586|ref|ZP_03243748.1| aspartyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 175

 Score =  171 bits (433), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 77/176 (43%), Positives = 110/176 (62%), Gaps = 1/176 (0%)

Query: 46  GITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105
           G+ Q+V +P S  +E A  VRSE+VL   G V  R     N  + TG+IE+  +++ I +
Sbjct: 1   GLVQLVCDPSSKAYEKALEVRSEFVLVAKGRVRLRGPGLENPKLKTGKIEIVLEELVIEN 60

Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
            +   P+   G +   E +R KYR+LDLR    ++    R+ +    R  +  + F+E  
Sbjct: 61  KSATPPIE-IGNKNVNEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNTLAQKGFLEIE 119

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           TPIL+ ++PEGARD+LVPSRV++G F+ALPQ+PQ +KQLLM  G DRYFQIA CFR
Sbjct: 120 TPILSKTTPEGARDYLVPSRVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFR 175


>gi|70605917|ref|YP_254787.1| lysyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|76363439|sp|Q4JCI5|SYK_SULAC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|68566565|gb|AAY79494.1| lysyl-tRNA synthetase type II [Sulfolobus acidocaldarius DSM 639]
          Length = 500

 Score =  171 bits (433), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 74/357 (20%), Positives = 145/357 (40%), Gaps = 32/357 (8%)

Query: 2   HRYR-THSCGDLGVSDVGSF--------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           H+Y  TH+  D+   +            +  +G V  +R HG I F+DI D     Q+  
Sbjct: 32  HKYDITHTIIDIKKMERSDKPTDAFAFDISTAGRVANIRRHGKISFVDIFDEGERLQLQL 91

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
             +    E+       + +   G ++    + +    I G++ L  +   +LS +     
Sbjct: 92  RVN----ELGDRYDKFFEIVDRGDILGVKGDLLYT--IKGELTLRIKDYVLLSKSL--IE 143

Query: 113 PVFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
           P    +  PE  R+ +R++D L  D   +N+  R   I  +R  + ++ F+E  TPIL  
Sbjct: 144 PPDWSKLSPE-FRYAHRYVDFLYNDLARRNMEIRYSTIRRIREFLYSKGFMEVETPILQP 202

Query: 172 SSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 A+ F+        ++Y L  + + Y +  +  GF++ F+I   FR+ED      
Sbjct: 203 VYGGALAKPFMSHVNYLNENWY-LRISLELYLKRYIVGGFNKVFEIGKVFRNEDIDVTHN 261

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           P EF  L++  ++ + +DI+   E +L+ V +  +N +       +I Y    + Y  + 
Sbjct: 262 P-EFTLLELYWAYADYNDIMRLTEEMLQDVVKNINNDS-------KIKYSIGGKEYTIEF 313

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILS---VNPGYEVWAIPAKGGGGNRAFCDRM 344
              R   ++ ++TE       ++  + L       G +        G       D++
Sbjct: 314 SQFRKITMIDSLTEVLGKDVDKMSDEELKSLMDKNGLKPRGNMYIRGLMIEKLFDKL 370



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 42/201 (20%)

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL--GII 427
             +G     ++    +++  +  ++   + +                R  + ++L   ++
Sbjct: 327 EVLGKDVDKMSDEELKSLMDKNGLKPRGNMYI---------------RGLMIEKLFDKLV 371

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                +  +++D+P      E   +   H                        +++L   
Sbjct: 372 TPTLIQPTFVLDYPV-----ETTPLCKPHR----------------SKQGLVERFELYVA 410

Query: 488 GFEIASGGIRNHMSEVM----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           G E+A+     +   +      Q         E          RA   GMPP GG+  GI
Sbjct: 411 GMELANAYTELNDPIIQDMLFKQEQEMFKRGDEEAHPYDVDFVRALSYGMPPTGGLGIGI 470

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           DR++MLL    +++E+  +PM
Sbjct: 471 DRLIMLLTNNMSIKEIIPYPM 491


>gi|325956896|ref|YP_004292308.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333461|gb|ADZ07369.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 432

 Score =  171 bits (433), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 71/324 (21%), Positives = 120/324 (37%), Gaps = 28/324 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      FE AK++R E 
Sbjct: 10  SSKHVDQEVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFETAKTLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G V   +             E+    ++++S  E       G +E+       +R
Sbjct: 70  SFYITGTVHEDARSHF-------GYEIQITDLKVVSNNE---GYPIGNKEHGVDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +  +       E FI+   PI   S+PEG          +  
Sbjct: 120 HLWLRSKKPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFDHD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           L+  E  L  + ++  + N           +  ++  G D   LR P    N T      
Sbjct: 237 LDLQERYLAYMIKQVLDKN-----------EYELKILGRDPEKLR-PTTEGNFTRLPYDD 284

Query: 310 EFRVFSKILSVNPGYEVWAIPAKG 333
             ++           + +  P +G
Sbjct: 285 AVKMLQDAGRDFKWGDDFGAPDEG 308



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 46/140 (32%), Gaps = 22/140 (15%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G I+       +I+++P             +  PF M +      +      I    Y  
Sbjct: 308 GYISEQYDRPVFIVNYP------------TSIKPFYMKKNPDNPKEYLCADVIAPEGY-- 353

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
                EI  G  R    EV+ Q     G++ E  +          + G  PH G   G +
Sbjct: 354 ----GEIFGGSEREGNYEVLKQQILAAGLNLEDYQ----WYLDLRKFGGVPHSGFGMGFE 405

Query: 545 RIVMLLLGAKNVREVSLFPM 564
           R +  +    ++RE   FP 
Sbjct: 406 RTIAWVCHLDHIREAIPFPR 425


>gi|305665273|ref|YP_003861560.1| asparaginyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88710028|gb|EAR02260.1| asparaginyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 477

 Score =  171 bits (433), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 53/284 (18%), Positives = 106/284 (37%), Gaps = 30/284 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEW 69
           L  +     V ++GWV   R +    F+ + D   I  +    D      E+ K + +  
Sbjct: 10  LSNAPEQQEVVVNGWVKTFRSNR---FIALNDGSTINNIQCVVDFENLEEEVLKQINTGA 66

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            L I G+++       +       +E+    I++   A+    P+  ++   E +R K  
Sbjct: 67  ALKISGILVESQGRGQS-------VEIQVNDIQVHGGADPEAYPIQPKKHSLEFLREK-A 118

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-- 187
            L +R +T    +  R+ +  ++       +F     PI+T S  EGA +    + ++  
Sbjct: 119 HLRVRTNTFAAVMRVRSALAFAIHQYFRQNDFYYFHAPIVTGSDAEGAGEMFRVTTLDSK 178

Query: 188 ------------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                       +  F+          Q +    A G  + +   P FR E+  + R   
Sbjct: 179 NPPLNEEGEVNYKEDFFGKETNLTVSGQLEAEAYAMGLGKVYTFGPTFRAENSNTSRHLA 238

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           EF+ ++ EM+F + D  ++  E+ ++ V             FL 
Sbjct: 239 EFWMVEPEMAFYDLDANMDLAEDFIKNVIAYILEHCNEDLQFLE 282



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 14/118 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M           D  +++A   D++  G  EI  G  R    +V+ +  +
Sbjct: 369 DYPAKIKAFYMR-------LNEDGKTVRAM--DILFPGIGEIVGGSQREERLDVLKEKIA 419

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           ++GI     E          + G   H G   G +R+V+   G  N+R+V  FP +  
Sbjct: 420 DLGID----EEELWWYLDLRKFGTAEHSGFGLGFERLVLFATGMGNIRDVIPFPRTPQ 473


>gi|327539769|gb|EGF26372.1| lysyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 546

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 70/351 (19%), Positives = 133/351 (37%), Gaps = 31/351 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFE 60
           YR     +    ++G  VR++G +   RP G +IF++IRD  G  Q+           F+
Sbjct: 100 YRQWKADNGPGEEIGPIVRVAGRILLARPTGKLIFMNIRDWTGDIQIFVGKKQVGDENFD 159

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +AK      ++ + G +             TG++ + A+++ +L+   E   P       
Sbjct: 160 LAKLFDLGDLIGVQGRL---------GRTNTGELTVFAEELFLLTKMLE-VPPEKHAGMT 209

Query: 121 PESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGAR 178
            + +R + R+ DL   D + +  + RT+II S+R  +  + F E   P L T      AR
Sbjct: 210 NQDLRQRMRYADLAFNDGVMQTFLDRTKIIKSIRSTLDDQGFCEVEGPTLHTVPGGAAAR 269

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F             +  A + + + LM  G +R +++   +R+E   S R   EF  L+
Sbjct: 270 PFETHHNALDMQL-TMRIALELHLKRLMVGGMERVYELGRVYRNEGL-SPRHNPEFTMLE 327

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              ++   + +++  E ++    E+   G      F R         Y     D   P  
Sbjct: 328 TYQAYGNYESMMDLTEKIICDAIEKIGGG------FKR--------EYNGTMLDFTPPFQ 373

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
                E F  +     +   +V    +   +  +G   +    +   E   
Sbjct: 374 RATYAELFQKATGIDPADEDAVKEYAKGLKLTIEGKHPDVIRNEIFEEKVE 424



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 65/174 (37%), Gaps = 34/174 (19%)

Query: 403 AGDPLKFCSFAADARNHI-AQELGIINCNCFE---------FCWIMDFPFYEWNEEEKKI 452
             D      +A   +  I  +   +I    FE           ++ D+P           
Sbjct: 389 PADEDAVKEYAKGLKLTIEGKHPDVIRNEIFEEKVEDSLQGPIFVTDYP----------- 437

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ--AFSN 510
             +  P T  +     +         A ++++   G E+A+     +  ++  +      
Sbjct: 438 -ASICPLTKRKKDNPEI---------AERFEMFICGMELANAYTELNDPDLQEELFKTQL 487

Query: 511 VGISKEVVENRFGG-LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G   E    +      RA + GMPP GG+  GIDR+VM+L   K++R+V LFP
Sbjct: 488 EGQDDEDSMAKMDHDFVRALRYGMPPAGGLGIGIDRLVMVLTNQKSIRDVILFP 541


>gi|290559652|gb|EFD92979.1| asparaginyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 428

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 71/343 (20%), Positives = 132/343 (38%), Gaps = 30/343 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G+V+ +R      FL +RD  G+ Q V++     FE   ++  E  + + G+V
Sbjct: 15  GKNVTINGFVNSIRKGKNNTFLMLRDPSGLIQCVSHSFEKDFETVNNITRESAIEVSGVV 74

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                         G  EL   ++++ S+AE  PL   G ++      F  R L +R   
Sbjct: 75  KKDER-------AEGGYELQISELKVYSIAEPYPLK-KGHKKV---FLFDNRHLWIRSPK 123

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R+ + +S+     + NF E  +P     S EG          N+ ++  L Q+
Sbjct: 124 TTAIMKIRSTVFSSIHEFFSSMNFYEIQSPSFVGGSVEGGATLFETQYFNRKAY--LTQS 181

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y    M     + + +AP FR E  R+ R   EF+  + E++F   DD+++  E ++
Sbjct: 182 WQLY-AEAMVDSLWKIYTVAPSFRAEKSRTWRHLTEFWHAEAEVAFKTNDDVMDLEEKLI 240

Query: 258 RGVFEEFSNGNTVS----------------NNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           + V +   + N                     FLR+ Y++ I     +   L     +  
Sbjct: 241 KFVIKNVLSKNEDDLKVINRDTKILENTVSKPFLRMKYEEVIDLANRNGLKLEYGADLGA 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
             E  + S+  V    +      + +             C+ +
Sbjct: 301 DEERVITSKLDVPIFSIDYPIELKPFYHKPNPKDPKHVLCNDL 343



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 70/209 (33%), Gaps = 31/209 (14%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD--ARNHIAQELGIINCNCFEFCW 436
           L     + +   +  ++ D    I  D     +  +    R    + + + N N  +  +
Sbjct: 235 LEEKLIKFVIKNVLSKNEDDLKVINRDTKILENTVSKPFLRMKYEEVIDLANRNGLKLEY 294

Query: 437 -----------IM---DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
                      I    D P +  +   +   F H P        + +  NDLL+ + +  
Sbjct: 295 GADLGADEERVITSKLDVPIFSIDYPIELKPFYHKP---NPKDPKHVLCNDLLAPEGY-- 349

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
                  EI  GG R    E +L+      ++++  E          + G  PH G   G
Sbjct: 350 ------GEIIGGGQRVDDKETLLKRLKEEKLNEKDYE----WYIDLRRYGAIPHSGFGLG 399

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +DR+VM +    ++     FP +    + 
Sbjct: 400 VDRLVMWICKLPHIMYGVPFPRTPRRLNP 428


>gi|290558908|gb|EFD92297.1| asparaginyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 428

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 71/343 (20%), Positives = 132/343 (38%), Gaps = 30/343 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V ++G+V+ +R      FL +RD  G+ Q V++     FE   ++  E  + + G+V
Sbjct: 15  GKNVTINGFVNSIRKGKNNTFLMLRDPSGLIQCVSHSFEKDFETVNNITRESAIEVSGVV 74

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                         G  EL   ++++ S+AE  PL   G ++      F  R L +R   
Sbjct: 75  KKDER-------AEGGYELQISELKVYSIAEPYPLK-KGHKKV---FLFDNRHLWIRSPK 123

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R+ + +S+     + NF E  +P     S EG          N+ ++  L Q+
Sbjct: 124 TTAIMKIRSTVFSSIHEFFSSMNFYEIQSPSFVGGSVEGGATLFETQYFNRKAY--LTQS 181

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y    M     + + +AP FR E  R+ R   EF+  + E++F   DD+++  E ++
Sbjct: 182 WQLY-AEAMVDSLWKIYTVAPSFRAEKSRTWRHLTEFWHAEAEVAFKTNDDVMDLEEKLI 240

Query: 258 RGVFEEFSNGNTVS----------------NNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           + V +   + N                     FLR+ Y++ I     +   L     +  
Sbjct: 241 KFVIKNVLSKNEDDLKVINRDTKILENTVSKPFLRMKYEEVIDLANRNGLKLEYGADLGA 300

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
             E  + S+  V    +      + +             C+ +
Sbjct: 301 DEERVITSKLDVPIFSIDYPIELKPFYHKPNPKDPKHVLCNDL 343



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 70/209 (33%), Gaps = 31/209 (14%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD--ARNHIAQELGIINCNCFEFCW 436
           L     + +   +  ++ D    I  D     +  +    R    + + + N N  +  +
Sbjct: 235 LEEKLIKFVIKNVLSKNEDDLKVINRDTKILENTVSKPFLRMKYEEVIDLANRNGLKLEY 294

Query: 437 -----------IM---DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
                      I    D P +  +   +   F H P        + +  NDLL+ + +  
Sbjct: 295 GADLGADEERVITSKLDVPIFSIDYPIELKPFYHKP---NPKDPKHVLCNDLLAPEGY-- 349

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
                  EI  GG R    E +L+      ++++  E          + G  PH G   G
Sbjct: 350 ------GEIIGGGQRVDDKETLLKRLKEEKLNEKDYE----WYIDLRRYGAIPHSGFGLG 399

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +DR+VM +    ++     FP +    + 
Sbjct: 400 VDRLVMWICKLPHIMYGVPFPRTPRRLNP 428


>gi|32476672|ref|NP_869666.1| lysyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|32447218|emb|CAD77044.1| lysyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 546

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 70/351 (19%), Positives = 133/351 (37%), Gaps = 31/351 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFE 60
           YR     +    ++G  VR++G +   RP G +IF++IRD  G  Q+           F+
Sbjct: 100 YRQWKADNGPGEEIGPIVRVAGRILLARPTGKLIFMNIRDWTGDIQIFVGKKQVGDENFD 159

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +AK      ++ + G +             TG++ + A+++ +L+   E   P       
Sbjct: 160 LAKLFDLGDLIGVQGRL---------GRTNTGELTVFAEELFLLTKMLE-VPPEKHAGMT 209

Query: 121 PESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGAR 178
            + +R + R+ DL   D + +  + RT+II S+R  +  + F E   P L T      AR
Sbjct: 210 NQDLRQRMRYADLAFNDGVMQTFLDRTKIIKSIRSTLDDQGFCEVEGPTLHTVPGGAAAR 269

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F             +  A + + + LM  G +R +++   +R+E   S R   EF  L+
Sbjct: 270 PFETHHNALDMQL-TMRIALELHLKRLMVGGMERVYELGRVYRNEGL-SPRHNPEFTMLE 327

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              ++   + +++  E ++    E+   G      F R         Y     D   P  
Sbjct: 328 TYQAYGNYESMMDLTEKIICDAIEKIGGG------FKR--------EYNGTMLDFTPPFQ 373

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
                E F  +     +   +V    +   +  +G   +    +   E   
Sbjct: 374 RATYAELFQKATGIDPANEDAVKEYAKGLKLTIEGKHPDVIRNEIFEEKVE 424



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 26/151 (17%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            RN I +E   +  +     ++ D+P             +  P T  +     +      
Sbjct: 414 IRNEIFEE--KVEDSLQGPIFVTDYP------------ASICPLTKRKKDNPEI------ 453

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGISKEVVENRFGG-LYRAFQCG 532
              A ++++   G E+A+     +  ++  +       G   E    +      RA + G
Sbjct: 454 ---AERFEMFICGMELANAYTELNDPDLQEELFKTQLEGQDDEDSMAKMDHDFVRALRYG 510

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP GG+  GIDR+VM+L   K++R+V LFP
Sbjct: 511 MPPAGGLGIGIDRLVMVLTNQKSIRDVILFP 541


>gi|319935563|ref|ZP_08009997.1| asparaginyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319809440|gb|EFW05861.1| asparaginyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 461

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 109/307 (35%), Gaps = 14/307 (4%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
            +V L GWV   R +G + FL + D                E   +++        G  +
Sbjct: 26  EYVELDGWVRTNRDNGKVGFLALNDGTYFRNCQIVYLKETLEDYDTIKHIS----TGSAI 81

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               +           E+ A +I +    ++       ++ +      +   L  R +T 
Sbjct: 82  RVLGKFKLTPESKQPFEIEATQIVVEGACDDDFPLQ--KKRHSFEYMREIPHLRPRANTF 139

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF------- 191
           +     R+ +  ++     ++ F+   TP++T +  EGA +    + ++   F       
Sbjct: 140 YAIFRLRSVLSMAIHEFFQSQGFVYVHTPLITGNDGEGAGEMFRATTIDNTDFDKDFFGK 199

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
            A      Q         F   +   P FR E+  + R   EF+ ++ E++F + +D ++
Sbjct: 200 EAFLTVTGQLHVEAFCMAFRDVYTFGPAFRAENSNTSRHASEFWMIEPEIAFADLEDDMD 259

Query: 252 TMENVLRGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
            +E++++   +    N       F ++   + I R    +      +      E    ++
Sbjct: 260 LIEDMVKFCIDYVLENAPEEMKFFAQMIDKECIERITHVRNSDFKRMTYTEAVEILEKAD 319

Query: 311 FRVFSKI 317
            +  +++
Sbjct: 320 VKFENEV 326



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   DL+  G  E+  G  R    +V+ +     G+     ++         +
Sbjct: 366 NDDNKTVA-ACDLLVPGIGELVGGSQREERYDVLERIMEEKGM----AKDGLQWYMDLRR 420

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   H G   G DR +M L G +N+R+V  FP +  
Sbjct: 421 YGGCKHAGFGLGFDRFLMYLTGMQNIRDVEPFPRTPR 457


>gi|304397090|ref|ZP_07378969.1| asparaginyl-tRNA synthetase [Pantoea sp. aB]
 gi|304355239|gb|EFM19607.1| asparaginyl-tRNA synthetase [Pantoea sp. aB]
          Length = 466

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 126/385 (32%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    G+ F+ + D      V A  +++       V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGLSFIAVYDGSCFNPVQAVVNNSLNNYQDEV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A  +E++   E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASPGQGQAFEIQATSLEVVGWVEDPDSYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +      R  +  ++        +   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDMENLPRND 191

Query: 189 -------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+   A      Q      AS   + +   P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFSEDFFGKEAFLTVSGQLNGETYASALSKIYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   DD     E++L+ VF                             ++ +F ++
Sbjct: 252 PEIAFATLDDAAALAESMLKYVFNAVLEERADDMAFFAERVDKEAVERLQRFITTDFAQV 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DA+           NP+   +   +EH  +   + F   + V    +          
Sbjct: 312 DYTDAVEILMNCGQTFENPVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI-----KAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+      +G++K      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDARLEEMGLNK----EDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 426 YGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|223994379|ref|XP_002286873.1| aspartate-trna ligase [Thalassiosira pseudonana CCMP1335]
 gi|220978188|gb|EED96514.1| aspartate-trna ligase [Thalassiosira pseudonana CCMP1335]
          Length = 475

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 75/385 (19%), Positives = 137/385 (35%), Gaps = 51/385 (13%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G L     G  V + G +H  R  G   F+ +     +  V      +    +  ++  
Sbjct: 18  IGALEKEMEGKKVVVRGHLHTSRGVGKGAFVVL--RSSLYTVQCVAFESIEIPSAMIKYM 75

Query: 69  WVLCIDGLVMSRSAETINANIITG----QIELSAQKIEILSVA---------EELPLPVF 115
             + ++ +V      T     + G     +E+       +  A         +     + 
Sbjct: 76  TGVPVESIVDVCGVLTCPEKAVEGATQSDVEIQVHSYHCVQKATAPMPFQMEDACRPDLV 135

Query: 116 GEREY-------PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
            E +         +  R  +R++DLR          ++ +    R  ++ +NFIE  TP 
Sbjct: 136 KETDVASEGGRVGQETRLDHRWIDLRTPANQSIFRIQSMVCTLFREYLLKQNFIEIHTPK 195

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA-SGFDRYFQIAPCFRDEDPRS 227
           + + + EG  D         G    L  +PQ +KQ+  A  GF+R F+I P FR E+  +
Sbjct: 196 ILSGASEGGADVFTLDYF--GKPACLSMSPQLHKQMAAACGGFERVFEIGPVFRAENSNT 253

Query: 228 DRLPGEFYQLDMEMSFVEQDD-ILNTMENVLRGVF--------------EEFSNGNTVSN 272
            R   EF  LD+EM+ +E  D +L+ +  +   +F              +E      +  
Sbjct: 254 RRHLCEFTGLDLEMAIMEHYDEVLDVLGELFVYIFDGLKEKCGQELERIKEQHGFEDLQY 313

Query: 273 NFLRICYDDAIRR-----YGTDKPDL-----RNPIIMHNVTEHFVHSEFRVFSK-ILSVN 321
               +  D A         G D+ DL      N   + ++ +   +++F +  K  LSV 
Sbjct: 314 LRKTLKIDYATGCRLLREAGVDQDDLDDLSTENEKKLGDIVKEKYNTDFYIMDKYPLSVR 373

Query: 322 PGYEVWAIPAKGGGGNRAFCDRMNE 346
           P Y +          +     R  E
Sbjct: 374 PFYTMPDPNNPKLSNSYDIFIRGQE 398



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 79/384 (20%), Positives = 124/384 (32%), Gaps = 56/384 (14%)

Query: 198 PQQYKQLLMASGFDRYFQIAP-CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           P   K+  +AS   R  Q      R  D R+      F                  ++++
Sbjct: 132 PDLVKETDVASEGGRVGQETRLDHRWIDLRTPANQSIFR-----------------IQSM 174

Query: 257 LRGVFEE-FSNGNTVSNNFLRICY-------DDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           +  +F E     N +  +  +I         D     Y      L     +H        
Sbjct: 175 VCTLFREYLLKQNFIEIHTPKILSGASEGGADVFTLDYFGKPACLSMSPQLHKQMAAACG 234

Query: 309 SEFRVFSK---ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
              RVF       + N           G     A  +  +E     G+    YIF  L E
Sbjct: 235 GFERVFEIGPVFRAENSNTRRHLCEFTGLDLEMAIMEHYDEVLDVLGEL-FVYIFDGLKE 293

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
                 +  + +     + + +R  L +     C  +  +         D      ++LG
Sbjct: 294 KCGQE-LERIKEQHGFEDLQYLRKTLKIDYATGCRLL-REAGVDQDDLDDLSTENEKKLG 351

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDL 484
            I    +      DF  Y  +    K   +  PF TMP      L         +  YD+
Sbjct: 352 DIVKEKYN----TDF--YIMD----KYPLSVRPFYTMPDPNNPKL---------SNSYDI 392

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
              G EI SG  R H + ++ +     GI  E +         AF+ G  PHGG   G++
Sbjct: 393 FIRGQEILSGAQRIHETGLLEERAKAWGIDLETISA----YLDAFRNGALPHGGGGIGME 448

Query: 545 RIVMLLLGAKNVREVSLFPMSQNF 568
           R+VML LG  N+R+ S+FP     
Sbjct: 449 RVVMLYLGLPNIRKSSMFPRDPRR 472


>gi|171780056|ref|ZP_02920960.1| hypothetical protein STRINF_01844 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281404|gb|EDT46839.1| hypothetical protein STRINF_01844 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 448

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 64/308 (20%), Positives = 111/308 (36%), Gaps = 24/308 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
              VG  V +  WV      G I FL +RD       V   P+          +  F   
Sbjct: 12  KDHVGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKYGEEEGTEKFNTI 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + I G+V   S             EL    ++I+  +E+ P+     +E+  
Sbjct: 72  KHLSQETSILITGIVKEDSRSKF-------GYELDVTDLKIVGHSEDYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                +R L LR       +  R  II +         FI+  +PIL+ ++ E + +   
Sbjct: 122 DFLMDHRHLWLRSRKQMAIMQIRNAIIYATYDFFDKNGFIKFDSPILSGNAAEDSTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                 G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S
Sbjct: 182 TDYF--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  ++ L+  E  ++ + +   +    +   L    D   +        +     +  +
Sbjct: 239 FLSHEESLDLQEAYVKALIQGALDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAIDLL 298

Query: 303 TEHFVHSE 310
            EH    +
Sbjct: 299 QEHENDED 306



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 52/142 (36%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M       E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVIN-----YPASFKAFYMKPVPDNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ K   E          + G  PH G   GI+R+V  
Sbjct: 371 EIIGGSVREDDYDTLVAKMDALGMDKSEYE----FYLDLRKYGSVPHAGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|146283093|ref|YP_001173246.1| lysyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|145571298|gb|ABP80404.1| lysyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 426

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 66/331 (19%), Positives = 124/331 (37%), Gaps = 40/331 (12%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           F+ ++D  G  QV  +      E  ++V+   +  I       +AE   A    G + + 
Sbjct: 7   FMVLQDMSGRIQVYVDRKMLPAEQVEAVKHFDLGDI------IAAEGTLARSGKGDLYVY 60

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRM 156
              + +L+ +   PLP           R++ R++DL  +   +   + R+++I  +R  +
Sbjct: 61  MNNVRLLTKSLR-PLPDKFHGLTDTEQRYRQRYVDLMVNEEVRETFRVRSKVIAHIRKFL 119

Query: 157 IAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
              +F+E  TP+L T      A+ F           + L  AP+ Y + L+  GF+R F+
Sbjct: 120 AERDFLEVETPMLQTIPGGAAAKPFETHHNALDMPMF-LRIAPELYLKRLVVGGFERVFE 178

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           I   FR+E   +   P EF  L+   ++ + +D ++  E + R + +       V     
Sbjct: 179 INRNFRNEGVSTRHNP-EFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGSTDVP---- 233

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
                     YG        P    +V +  +     +      +N   +  AI  K G 
Sbjct: 234 ----------YGDKVFHFGEPFARLSVFDSILKFNPEI--SASDLNDLEKARAIAKKAG- 280

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDES 366
                       A+  G  GL  +   + E 
Sbjct: 281 ------------AKLLGHEGLGKLQVMIFEE 299



 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 78/202 (38%), Gaps = 30/202 (14%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           ++    + K    ++   +    D++   +    AG  L         +  I +EL  + 
Sbjct: 248 LSVFDSILKFNPEISASDLN---DLEKARAIAKKAGAKLLGHEGLGKLQVMIFEEL--VE 302

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
               +  +I ++P +E +   ++                    ND       +++L   G
Sbjct: 303 HKLEQPTFITEYP-FEVSPLARR--------------------NDRNPNVTDRFELFIGG 341

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGID 544
            EIA+     + +E   + F      K+  ++          RA + GMPP  G   GID
Sbjct: 342 REIANAYSELNDAEDQAERFHAQVADKDAGDDEAMHFDADFVRALEYGMPPTAGEGIGID 401

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R+VMLL  + ++R+V LFP  +
Sbjct: 402 RLVMLLTNSPSIRDVILFPHMR 423


>gi|124359384|gb|ABN05850.1| Lysyl-tRNA synthetase, class-2; Aminoacyl-transfer RNA synthetase,
           class II [Medicago truncatula]
          Length = 610

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 84/572 (14%), Positives = 166/572 (29%), Gaps = 128/572 (22%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V L+G +   R  G  ++F D+ D     QV+A+   +    A            G ++ 
Sbjct: 122 VSLTGKIMHKRSSGAKLVFYDLHDDGFKVQVMADASKSDLNEA-GFDKVHSNVKRGDIVG 180

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--------------------RE 119
            +          G++ +  +   +LS    +                             
Sbjct: 181 ITG--FPGKSRKGELSIFPKTFVVLSHCLHMMPRQKSAAAAAADNAWLPGKTRNPEAYTL 238

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
             +  R++ R LDL  +T  + I + R++II+ +R  +   +F+E  TP++   +   A 
Sbjct: 239 KDQETRYRLRHLDLMLNTEVREIFRTRSKIISYVRSFLDKLDFLEVETPMMNMIAGGAAA 298

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
              V    +      +  AP+ Y + L+  G +R                          
Sbjct: 299 RPFVTHHNDLNMRLFMRIAPELYLKKLVVGGLNR-------------------------- 332

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
                             +  + ++F N      +       +    Y            
Sbjct: 333 ------------------VYEIGKQFRNEGIDLTHNPEFTTCEFYMAY------------ 362

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
             +  +    +E  +   +  +  G       A G   +    D    + R     GL  
Sbjct: 363 -KDYYDLMEITENMLSGMVYELTKGSYKIKYHADGLDKDPIEIDFTPPFRRIDMIEGL-- 419

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                           + K L             ++           P            
Sbjct: 420 ---------EEMAGLSIPKDLTSAEANQYLRDACLKYE----IKCPPPETTARLLDKLVG 466

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           H  +E  +         +I++                 +P  M                 
Sbjct: 467 HFLEETCV------NPTFIIN-----------------HPEIMSPLAKWHR----TKPGL 499

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMP 534
             +++L  N  E+A+     +   V  Q F++    ++  ++    L      A + G+P
Sbjct: 500 TERFELFINKHELANAYTELNDPVVQRQRFADQLKDRQSGDDEAMALDETFCTALEYGLP 559

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P  G   GIDR+ MLL  ++N++EV LFP  +
Sbjct: 560 PTAGWGLGIDRLTMLLTDSQNIKEVLLFPAMK 591


>gi|328466022|gb|EGF37199.1| asparaginyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 432

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 73/323 (22%), Positives = 122/323 (37%), Gaps = 34/323 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      FE+AKS+R E 
Sbjct: 10  SSKHVDQEVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVTDKVFEVAKSLRQES 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G V   +             E+    ++++S  E       G +E+       +R
Sbjct: 70  SFYITGTVHEDARSHF-------GYEIQITDLKVVSNNE---GYPIGNKEHGIDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  +  +  +       E+FI+   PI   S+PEG          +  
Sbjct: 120 HLWLRSKKPFAIMQIKNTMFKATVDFFEKEDFIKFDAPIFMHSAPEGTTQLFHVDYFDHD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  F + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMAFGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDL 293
           L+  E  L  + ++  + N                    NF+R+ YDDA++       D 
Sbjct: 237 LDLQERYLAYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFVRLPYDDAVKMLQDAGRDF 296

Query: 294 RNPIIMH--NVTEHFVHSEFRVF 314
           +        +        +  VF
Sbjct: 297 KWGDDFGAPDEGYISEQYDRPVF 319



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 28/175 (16%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEE 449
           +G+       D +K    A         + G  +            +I+++P        
Sbjct: 274 EGNFVRLPYDDAVKMLQDAGR-DFKWGDDFGAPDEGYISEQYDRPVFIVNYP-------- 324

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                +  PF M +      +      I    Y       EI  G  R    EV+ Q   
Sbjct: 325 ----TSIKPFYMKKNPDNPKEYLCADVIAPEGY------GEIFGGSEREGNYEVLKQQII 374

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + G++ E  +          + G  PH G   G +R +  +    ++RE   FP 
Sbjct: 375 DAGLNLEDYQ----WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPR 425


>gi|301114479|ref|XP_002999009.1| asparaginyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262111103|gb|EEY69155.1| asparaginyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 513

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 130/362 (35%), Gaps = 31/362 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +  D    D GS V + GWV  VR H  + F+++ D   + ++     SA  E A  
Sbjct: 36  RRSTIRDAREQDSGSRVAVGGWVKSVRKHKSVSFVNVNDGSCLGELQITLPSAEAEGASD 95

Query: 65  --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +     + +   V +             ++EL   K++IL   +    P+  +    E
Sbjct: 96  GPLAKIADITVGSSVFAEGELREVPGGKQRRLELHPSKLKILGKCDTQAYPLQKKYHSLE 155

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R K   L  R +T       R  +   +       +F+   +PILT++  EGA +   
Sbjct: 156 FLREKL-HLRARTNTFGAVTRVRNALGQGLHSYFQENDFLHLHSPILTSNDCEGAGEMFR 214

Query: 183 PSRVN--QGSFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            ++++     F+  P       Q    + AS   + +   P FR E+  + R   EF+ +
Sbjct: 215 IAKIDGKDEEFFGTPTYLTVSGQLHAEMYASALSKVYTFGPTFRAENSNTTRHLAEFWMV 274

Query: 238 DMEMSFVEQDD--------ILNTMENVLRGVFEEFSNGNTV-------------SNNFLR 276
           + EM+F   ++        +  ++ + L    E+ +  N                  F R
Sbjct: 275 EPEMAFAGLEECVASAQGAVQRSVSHALNTCAEDIAFFNKNYDKKIAERLQRVVEKEFAR 334

Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH--SEFRVFSKILSVNPGYEVWAIPAKGG 334
           + Y +AI        + +  +I     E  +   +E   F     V     V   PA   
Sbjct: 335 LTYTEAIAVLQKAVAEGKGKVIFEKKPEWGMDLQTEHERFLAEKYVGGPVFVTDYPADIK 394

Query: 335 GG 336
             
Sbjct: 395 AF 396


>gi|145352373|ref|XP_001420524.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580758|gb|ABO98817.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 491

 Score =  171 bits (432), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 70/304 (23%), Positives = 117/304 (38%), Gaps = 26/304 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-----ANPDSACFEIAKSVR 66
           L  +     V L G VH VR  G   F+ +R      QV       N      + A ++ 
Sbjct: 37  LNETLKDREVLLRGRVHNVRGKGKSAFIVLRQQTATVQVTLFVDDVNVSKGMVKWASALA 96

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP----- 121
            E V+ + GLV+    E    +    ++E+  ++I  +S ++     +  +   P     
Sbjct: 97  RESVVDVKGLVVH--PEVPIESCTQKEVEVVCREIHCISRSDPELPFLIEDASRPDSAFE 154

Query: 122 ----------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
                     +  R   R +DLR    +     ++ +    R  ++  NF E  TP L A
Sbjct: 155 AEDTQFVRVLQDTRLNNRVMDLRTPANNAIFKIQSGVGTLFREALLRRNFTEIHTPKLIA 214

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
            + EG         +  G    L Q+PQ YKQ+ +    +  F+I P FR ED  + R  
Sbjct: 215 GASEGGAAVFKLDYMQVG-PACLAQSPQLYKQMAIMGDLEGVFEIGPVFRAEDSNTHRHL 273

Query: 232 GEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
            EF  LDMEM+  E  D +L+ ++ +   +F+  +           +            +
Sbjct: 274 CEFTGLDMEMTIKEHYDEVLDVLDELFVSMFDGLNERFKREIGV--VNEQHPFEPLQYCR 331

Query: 291 PDLR 294
           P LR
Sbjct: 332 PSLR 335



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 58/163 (35%), Gaps = 24/163 (14%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMES 468
                D      + LG +    +      DF          +      PF TMP     +
Sbjct: 352 VDPLGDIGTETERVLGRLVKEKYG----TDFYMLT------RYPLNARPFYTMPAPDDPN 401

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              +         +D+   G EI SG  R H  +++ +     GI    ++        +
Sbjct: 402 YTNS---------FDIFIRGQEIISGAQRIHDPKLLAERAEACGIELPTIQP----YIDS 448

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           F+ G  PHGG   G++R+ ML L   N+R+ S+FP        
Sbjct: 449 FKYGAMPHGGCGVGLERVAMLFLNLPNIRKTSMFPRDPKRLTP 491


>gi|293365829|ref|ZP_06612534.1| asparagine-tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307703302|ref|ZP_07640247.1| asparaginyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291315653|gb|EFE56101.1| asparagine-tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623168|gb|EFO02160.1| asparaginyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 447

 Score =  171 bits (432), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYTTYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKME 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|148377884|ref|YP_001256760.1| lysyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291930|emb|CAL59321.1| Lysyl tRNA synthetase [Mycoplasma agalactiae PG2]
          Length = 489

 Score =  171 bits (432), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 66/335 (19%), Positives = 125/335 (37%), Gaps = 35/335 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           ++ Y + S  +L   ++   V ++G +  VR      FL + D  G+ QV  N   D   
Sbjct: 42  VNNYDSFSREELEEKNI--SVNVAGRLMTVRGP----FLVLNDSKGLVQVYFNKKSDENV 95

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            +I  +     +L + G VM            T  + L   KIE+L+ A + PLP     
Sbjct: 96  AKIVGTFDIGDILWVSGTVM---------KTHTNALTLKCNKIELLTKALK-PLPEKYHG 145

Query: 119 EYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                 R++ R++DL  +   KN  + RT+II  ++      +++E  TP L       A
Sbjct: 146 LVDTEERYRRRWVDLITNEESKNKFILRTKIIKWIKEYFDNLDYLEVETPFLQDYVSGAA 205

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                    +    + L  A +   +  +  G +R +++   FR+E   +   P EF  +
Sbjct: 206 AKPFTTHHNSLNQEFVLRIATEIPLKKCVVGGLERVYELGRIFRNEGYDTTHNP-EFTTI 264

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +   ++   + +++  E + + + ++      V+N                   DL  P 
Sbjct: 265 EFYEAYSNVEGMMDRTEELFKVLCQKLGKSVFVNNGTEV---------------DLSKPF 309

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
              N+ +       + F  I       E      K
Sbjct: 310 KRINMVDAVNEKTGKDFKNISLDEAILEAKKHNIK 344



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 7/152 (4%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++  I     +    I++   YE   E   I          +    S K +D       
Sbjct: 338 AKKHNIKIEKFWTTGHIINA-LYEELVESSLIQPTFIYGHPIEVSPLSAKASDPR--FTE 394

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPH 536
           + +L  N  E A+           L+ F +    K+   +           A + GMPP 
Sbjct: 395 RAELFINTKEYANMYTELSDPIDQLERFKSQIDEKKAGNDEASDIDWDFVDALEYGMPPT 454

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           GG   GIDR++MLL    ++R+V LFP  +  
Sbjct: 455 GGCGIGIDRLIMLLTETSSIRDVLLFPTLKRA 486


>gi|195438242|ref|XP_002067046.1| GK24233 [Drosophila willistoni]
 gi|194163131|gb|EDW78032.1| GK24233 [Drosophila willistoni]
          Length = 558

 Score =  171 bits (432), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 69/349 (19%), Positives = 134/349 (38%), Gaps = 23/349 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           GV+  G  V++ GWVHR+R  G  +IF+ +RD  G  Q V N        A ++ +E  +
Sbjct: 130 GVAHRGERVKIYGWVHRLRRQGKALIFITLRDGTGFLQCVLNDLLCQTYEALTLTTESSV 189

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  E+S    E++ +A           E    ++   R +
Sbjct: 190 VLYGTLKLVPEG----KTAPGGHEMSVDYWELVGLAPAGGADAILNEEAQPDVQLDQRHI 245

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +     +  R+ ++ + R   +  ++ E + P L  +  EG           + ++
Sbjct: 246 MIRGENTSNVLKMRSVVLQAFRAHYLGRDYNEVTPPTLVQTQVEGGSTLFKLQYFGEEAY 305

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ----- 246
             L Q+ Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+       
Sbjct: 306 --LTQSSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFISFDDLLD 362

Query: 247 ---DDILNTMENVLRG-----VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              D + + ++ VL+      V+E   +       F R+ Y DAI+    +    ++   
Sbjct: 363 RLEDLVCDVVDRVLKSPWGHLVYELNPDFKVPKKPFRRMNYSDAIKWLKENNV-TKDDGT 421

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
            +   E    +  R  +  ++       + +  K    +R   D R+ E
Sbjct: 422 FYEFGEDIPEAPERKMTDTINEPIMLCRFPVEIKSFYMSRCPEDQRLTE 470



 Score = 63.9 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   SE +L+ +   GI  +     +         G  PHGG   G+
Sbjct: 475 LLPNVGEIVGGSMRIWNSEELLKGYEREGIDPKP----YYWYTDQRVYGSMPHGGYGLGL 530

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  LL   ++R+V L+P 
Sbjct: 531 ERFICWLLNRYHIRDVCLYPR 551


>gi|159110974|ref|XP_001705722.1| Aspartyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157433811|gb|EDO78048.1| Aspartyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 555

 Score =  171 bits (432), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 73/293 (24%), Positives = 119/293 (40%), Gaps = 31/293 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV-------------ANPDSACFEIAK 63
           VG  V +   +H VR  G   FL +R    I Q                +   A  +   
Sbjct: 94  VGHKVWVRARIHTVRATGKSAFLMLRGKMAILQACCFVPGKSEGSAEKVDEYRAMIKYIN 153

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE- 122
           S+  E V+ + G + S  A    A+      EL  +KI  +S A         +   P+ 
Sbjct: 154 SLPPESVVEVCGALSSVDAPIKTASAEHRDYELQLEKIYAISRAASQMPLQVDDAMRPDS 213

Query: 123 --------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                           +  YR +DLR  T    +  R+ I +  R  +    FIE +TP 
Sbjct: 214 VYQAPDSQYVRPGKDTKQDYRVIDLRTPTNQAIMRVRSAIAHEFRSFLDKAGFIEINTPK 273

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           + A + EG       +  N  +   L Q+PQ YKQ+ ++SGF R +++ P FR E   + 
Sbjct: 274 IVAGTSEGGAAVFNVNYFNTKA--CLAQSPQLYKQMCISSGFGRVYEVGPVFRAEHSHTH 331

Query: 229 RLPGEFYQLDMEM-SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
           R   EF  LD+EM  +    +IL  + ++++ +F+      +   + +R  YD
Sbjct: 332 RHLCEFIGLDLEMEIYESYTEILVLLGDLMKHIFKAVEARCSKEMSIVRTQYD 384



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 56/159 (35%), Gaps = 22/159 (13%)

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
             D      + LG +    +      DF   +      K      PF             
Sbjct: 419 LDDLSTENERALGKLIKEKYN----TDFYILD------KFPLNARPFYTMPD-------- 460

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                 +  YD+   G EI SG  R H  E++ +      +              AF+ G
Sbjct: 461 PHDGRYSNSYDMFIRGEEICSGAQRVHDPELLEKQCRERNVDP----ESLRSYIDAFRYG 516

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             PHGG   G++RIVML+LG +N R+  LFP +Q     
Sbjct: 517 CAPHGGAGLGLERIVMLMLGIENCRQTCLFPRTQERLTP 555


>gi|225022122|ref|ZP_03711314.1| hypothetical protein CORMATOL_02155 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945055|gb|EEG26264.1| hypothetical protein CORMATOL_02155 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 520

 Score =  171 bits (432), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 72/334 (21%), Positives = 138/334 (41%), Gaps = 21/334 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVM 78
            V ++G V  +R  G + F  I++  G          +  E+   + + W   +D G ++
Sbjct: 72  EVAIAGRVLFIRNTGKLCFATIQEGSGTQ---IQAMLSLAEVGPDLLAAWKSDVDLGDIV 128

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDT 137
           S     I +    G++ + A    + + A       F   +  E +R ++R+ DL  R+ 
Sbjct: 129 SVRGRVIVSK--RGELSVLASSWHMAAKALRPLPVAFA--DMSEDMRVRHRYTDLIMREK 184

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
             +N + R +++ ++R  + ++ F+E  TP+L        AR F+  S       Y L  
Sbjct: 185 ARENALTRIKVMRALRNYLESQGFLEVETPMLQTLHGGAAARPFVTHSNALDIDLY-LRI 243

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y +  +  G +R F++   FR+E   S   P EF  L+   ++   DD    ++N+
Sbjct: 244 APELYLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFAMLETYQAWGTYDDCAELIKNL 302

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN--VTEHFVHSEFRVF 314
           ++ V  E     TV+     +         G + P +     ++     +  V  E  V 
Sbjct: 303 IQDVAMEVFGSTTVT-----LADGSEYDLGGAEWPTIEMYPSLNEALQRKFPVQPEVTVN 357

Query: 315 SKILSVNP--GYEVWAIPAKGGGGNRAFCDRMNE 346
           S +  +          +PAKGG G+    + + E
Sbjct: 358 STVAELREIADVVGLDVPAKGGWGHGKLVEELWE 391



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 70/200 (35%), Gaps = 14/200 (7%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI--INCNCFEFCW 436
           L       I +   + +     F     +   S  A+ R  IA  +G+       +    
Sbjct: 326 LGGAEWPTIEMYPSLNEALQRKFPVQPEVTVNSTVAELR-EIADVVGLDVPAKGGWGHGK 384

Query: 437 IMD--FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
           +++  +     ++ E  I   + P           + +        ++DL   GFE+A+G
Sbjct: 385 LVEELWELLCEDQLEGPIFVRNFP----VETSPLTRQHRSEPGVTEKWDLYVRGFELATG 440

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
                   +  + F +        +            A + GMPP  G   GIDR++M L
Sbjct: 441 YSELVDPVIQRERFEDQARLAAGGDEEAMVLDEDFLAAMEQGMPPTAGAGMGIDRLLMAL 500

Query: 551 LGAKNVREVSLFPMSQNFCD 570
            G   +RE  LFP+ +   D
Sbjct: 501 TGLG-IRETVLFPLVKPERD 519


>gi|224093120|ref|XP_002309798.1| predicted protein [Populus trichocarpa]
 gi|222852701|gb|EEE90248.1| predicted protein [Populus trichocarpa]
          Length = 578

 Score =  171 bits (432), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 58/354 (16%), Positives = 113/354 (31%), Gaps = 55/354 (15%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           D G+  VG  + + GWV  +R    + F+++ D   ++ +         E     + E  
Sbjct: 113 DEGLDRVGKTIVVMGWVRTLRVQSSVTFIEVNDGSCLSNMQC---VMGLEAEGYDQVESG 169

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L   G  +      + +     ++EL   KI ++  ++        ++            
Sbjct: 170 LITTGASILVQGTVVESQGSKQKVELKVNKIVLVGKSDPSYPIQ--KKRVSREFLRTKAH 227

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R  +  +         F+  S+PI+TAS  EGA +    + +  G 
Sbjct: 228 LRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCEGAGEQFCVTTLIPGS 287

Query: 190 -----------------------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDE 223
                                   F+  P       Q      A+     +   P FR E
Sbjct: 288 QEVANSPVDRIPKTKDGLIDWSQDFFGKPAFLTVSGQLNAETYATALSDVYTFGPTFRAE 347

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------- 267
           +  + R   EF+ ++ E++F +  D +      L+ V +                     
Sbjct: 348 NSNTSRHLAEFWMIEPELAFADLTDDMACATAYLQYVVKHILENCKEDMEFFNTWIEKGI 407

Query: 268 -----NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVF 314
                +    +F+++ Y DA+      K     P+       +EH  +     F
Sbjct: 408 IDRLTDVAEKDFVQLTYTDAVELLLKAKKKFEFPVEWGCDLQSEHERYITEEAF 461



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 37/102 (36%), Gaps = 4/102 (3%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    LV    E+  G  R    E +      + ++K      F      
Sbjct: 480 MRQNDDGKTVAAMDMLVPRVGELIGGSQREERLEYLEDRLDELKLNK----ESFWWYLDL 535

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            + G  PH G   G +R+V    G +N+R+   FP      +
Sbjct: 536 RRYGSVPHAGFGLGFERLVQFATGLENIRDAIPFPRVPGSAE 577


>gi|156398116|ref|XP_001638035.1| predicted protein [Nematostella vectensis]
 gi|156225152|gb|EDO45972.1| predicted protein [Nematostella vectensis]
          Length = 569

 Score =  171 bits (432), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 59/336 (17%), Positives = 127/336 (37%), Gaps = 13/336 (3%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V ++G +H  R  G  ++F D+R      QV+A+  ++     +   +       G ++ 
Sbjct: 100 VTVAGRIHAKRASGSKLLFYDLRGEGSKLQVMADARAS----EQDFNAVHDKIRRGDIIG 155

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTL 138
              +         ++ +    + +L+      LP        +  RF+ R+LDL   D +
Sbjct: 156 VKGKPGKTKKG--ELSILPSSVTLLAPCL-HMLPHLHFGLKDKETRFRQRYLDLILNDKV 212

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
               V R RIIN +R  +    F+E  TP++            +    +      +  AP
Sbjct: 213 RDKFVTRARIINCIRRFLDQLGFLEVETPLMNMIPGGATAKPFITHHNDLNMDLFMRVAP 272

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++   E ++ 
Sbjct: 273 ELYHKMLVVGGIDRVYEIGRQFRNESIDLTHNP-EFTTCEFYMAYADYNDLMEITETMIS 331

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS---EFRVFS 315
           G+ +  + G  V+ +   +  D+  + +  D       + M    E  +       + F+
Sbjct: 332 GMVKNITGGYKVTYHPEAVDADNLGKSWTVDFTPPFKRLRMIPELEKVLGVRLPSPQDFN 391

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
              +     ++           R     +++     
Sbjct: 392 TPEANKLLDQLCVKHEVDCAPPRTTARLLDKLVGEF 427



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 8/114 (7%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF----Q 530
                 +++L     EI +     +   V  + F      K   ++    +   F    +
Sbjct: 455 EKGLTERFELFVCCKEICNAYTELNDPMVQRERFEQQAKDKAAGDDEAMFVDENFCTSLE 514

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ----NFCDLLMGSPSTVS 580
            G+PP  G   G+DR+ M L  + N++EV  FP  +       D    +PS   
Sbjct: 515 FGLPPTAGWGLGVDRLTMFLTDSNNIKEVLFFPAMKPEENQKKDNPEDAPSKTD 568


>gi|321223326|gb|EFX48395.1| Asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
          Length = 445

 Score =  171 bits (432), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 68/378 (17%), Positives = 122/378 (32%), Gaps = 50/378 (13%)

Query: 24  SGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
            GWV   R    GI FL + D      V A  +++     + V    +    G  +  + 
Sbjct: 2   RGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEEV----LHLTTGCSVVVTG 57

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
           + + +       E+ A K+E+    E+        + +      +   L  R + +    
Sbjct: 58  KVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVA 117

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA----- 197
             R  +  ++      + F   STP++TAS  EGA +    S ++  +     Q      
Sbjct: 118 RVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRNDQGRVDFD 177

Query: 198 ------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                         Q      A    + +   P FR E+  + R   EF+ L+ E++F +
Sbjct: 178 KDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFAD 237

Query: 246 QDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRICYDDAIR 284
            +D     E +L+ VF                             VS +F ++ Y DA+ 
Sbjct: 238 LEDNARLAEAMLKYVFNAVLEERADDMKFFAERVDKDAIARLERFVSTDFAQVDYTDAVA 297

Query: 285 RYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
                     NP+    ++ +EH  +     F   + V    +            R   D
Sbjct: 298 ILERCGKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEI-----KAFYMRLNED 352

Query: 343 RMNEWARSQGQPGLAYIF 360
                A     PG+  I 
Sbjct: 353 GKTVAAMDVLAPGIGEII 370



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++K      +      
Sbjct: 349 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDL 402

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 403 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 441


>gi|322516976|ref|ZP_08069866.1| asparagine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322124459|gb|EFX95954.1| asparagine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 448

 Score =  171 bits (432), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 71/365 (19%), Positives = 132/365 (36%), Gaps = 47/365 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
              VG  + +  WV      G + FL +RD       V   P+          +  F+  
Sbjct: 12  PKHVGEEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKYGEEEGTEKFDTV 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + + G+V                 EL    +E++  + + P+     +E+  
Sbjct: 72  KRLSQETSVYVTGVVKEDERSKF-------GYELDVTAVEVIGESHDYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                 R L LR          R  II +         FI+  +PIL+ ++ E + +   
Sbjct: 122 DFLMDNRHLWLRSRKQMAVQQIRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                 G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S
Sbjct: 182 TDYF--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRY 286
           F+  D+ L+  E  ++ + +   +                   ++  F R+ YD+AI   
Sbjct: 239 FLSHDESLDLQEAYVKALIQGVIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEAIDLL 298

Query: 287 G-------TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
                   TD   L +     +  E ++ + F V + +++    ++ + +    G  +R 
Sbjct: 299 QAHENDEDTDYEHLEHGDDFGSPHETWISNYFGVPTFVVNYPASFKAFYMKPVPGNPDRV 358

Query: 340 FCDRM 344
            C  +
Sbjct: 359 LCADL 363



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  + +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPDRVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ +   E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDDYDALVAKMDELGMDRSEYE----FYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|187735195|ref|YP_001877307.1| asparaginyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187425247|gb|ACD04526.1| asparaginyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 456

 Score =  171 bits (432), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 81/414 (19%), Positives = 136/414 (32%), Gaps = 70/414 (16%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L   +    V + GWV   R      FL++ D   +   QVVA+     +E  
Sbjct: 4   RTLVKHVLDSEEEMPDVLIQGWVRTRRDSKAFSFLEVNDGSSVASLQVVADEGIPGYERI 63

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             + +   + I G +++             + EL A  +E++  A     P+  +   PE
Sbjct: 64  GEMATGSAVSIRGALVAGQGRQ--------RWELRAASLELVG-AVPDSYPLQKKGHTPE 114

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R     L  R +        R+R+  ++       +F   STPI+TAS  EGA +   
Sbjct: 115 FLR-SIAHLRPRTNLFGAVFRMRSRLAFAIHRFFQERDFSWVSTPIITASDCEGAGEMFR 173

Query: 183 PSRVNQGS---------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            + ++ G          F+   A      Q +    A      +   P FR E+  + R 
Sbjct: 174 VTTLDVGDATSRDASRDFFGKAAYLTVSGQLEGEAFACALSNIYTFGPTFRAENSNTTRH 233

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGV--------FEEFSN-------------GNT 269
             EF+ ++ EM+F +    ++  E  +R +         EE                 + 
Sbjct: 234 AAEFWMVEPEMAFCDLYGDMDMAEEFVRFLVGDALANSAEEVEFLTRFVDKGLRERLEHV 293

Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN---------VTEHFVHSEFRVFSKILSV 320
               F+R  Y +A+            P+             +TE        V++    +
Sbjct: 294 KETPFVRCSYTEAVDILLKSGKTFDYPVSWGINLQSEHERFLTEEHFKCPVIVYNYPKEI 353

Query: 321 NPGYEVWAIPAK----------------GGGGNRAFCDRMNEWARSQGQPGLAY 358
            P Y       K                GG       D + E  RS G    AY
Sbjct: 354 KPFYMRLNEDGKTVTAMDVLVPGIGEIVGGSQREERLDILEENMRSMGMNAEAY 407



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 14/114 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
           PF M           D  ++ A   D++  G  EI  G  R    +++ +   ++G++  
Sbjct: 355 PFYMR-------LNEDGKTVTAM--DVLVPGIGEIVGGSQREERLDILEENMRSMGMNA- 404

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                +       + G  PH G  AG +R++M + G  N+R+V  F  +   C+
Sbjct: 405 ---EAYRWYADLRRYGTVPHAGFGAGFERLLMFVTGVTNIRDVLPFARTPRNCE 455


>gi|145356687|ref|XP_001422558.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582801|gb|ABP00875.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 582

 Score =  171 bits (432), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 68/344 (19%), Positives = 125/344 (36%), Gaps = 37/344 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G +  G    ++G +   R  G  + F D+       QV A+  +A     + + S    
Sbjct: 114 GTTAEGESASVAGRIMSKRASGKKLYFYDLIADGKKIQVTADEGAASGYDFQKIHSATR- 172

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++             G++ L     EIL+   ++     G ++     RF+ RFL
Sbjct: 173 --RGDIVGVKG--TPGKTKRGELSLFPSNFEILTPCLKMLPGFSGLKDV--ETRFRMRFL 226

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQG 189
           DL   + +      R+ II  +R  +   +F+E  TP++   +    AR F+        
Sbjct: 227 DLMMNNEVRDTFYIRSNIIRYIRKYLDDRDFLEVETPMMNMIAGGATARPFITHHNDLNM 286

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           + Y +  AP+ Y + L+  G +R ++I   FR+E       P EF   +   ++ + DD+
Sbjct: 287 TLY-MRIAPELYLKQLVVGGIERVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADYDDL 344

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           +   E ++ G+                        +Y    PD  +PI +          
Sbjct: 345 MQMTEEMISGMVYAIKGSYK--------------IQYHAKGPD-EDPIEID--------- 380

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-DRMNEWARSQG 352
               F +I  V+   E   I       +     D + E  +  G
Sbjct: 381 FTPPFRRISMVSGLEEALNIKFPSTDFSTQENEDFLKELIKKLG 424



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 4/92 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++L  N  E+ +     +      + F     +K   ++          ++ + G+P
Sbjct: 476 TERFELFVNTKELCNAYTELNDPIDQRERFDEQAKAKSSGDDEAMLIDEVFVQSLEYGLP 535

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P GG   G+DR+ MLL    N++EV LFP  +
Sbjct: 536 PTGGWGLGVDRLTMLLADKNNIKEVLLFPAMK 567


>gi|160947517|ref|ZP_02094684.1| hypothetical protein PEPMIC_01451 [Parvimonas micra ATCC 33270]
 gi|158446651|gb|EDP23646.1| hypothetical protein PEPMIC_01451 [Parvimonas micra ATCC 33270]
          Length = 461

 Score =  171 bits (432), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 61/367 (16%), Positives = 126/367 (34%), Gaps = 53/367 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
           +   V ++GW+   R +  I F+++ D       Q+V       F+    +     + + 
Sbjct: 15  IDKEVEVAGWIKNSRFNNNIGFIELNDGTTFRSIQIVVESKLDNFQTISKLLLPSAIIVK 74

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V+       N        E++A +I +   +     P+  +R   E +R     L  R
Sbjct: 75  GKVVKSLGGKQN-------FEINASEIVVEGES-TDKYPLQKKRHTFEFLRTIQ-HLRPR 125

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +T +     R+ +  ++        F+   TPI+TAS  EGA +    + ++       
Sbjct: 126 ANTFNAVFRVRSILSYALHKFFFERGFVYAHTPIITASDAEGAGEMFRVTNLDIDNLPRT 185

Query: 190 ---------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F++ P       Q +    A  +   +   P FR E+  + R   EF+ +
Sbjct: 186 NNGEVDFTQDFFSKPTNLTVSGQLEGEAFAMAYRNIYTFGPTFRAENSNTTRHAAEFWMI 245

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN---------------------FLR 276
           + E++F +  D++   E++++ + +                                F  
Sbjct: 246 EPEIAFADLKDVIKLSEDMVKYIIKFVLENAPDEMKFFNDFIDNGLLERLNSVVNSEFKV 305

Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
           + Y +AI    + K + + P+      +     E  +  KI  V     +   P +    
Sbjct: 306 MTYTEAIEILKSSKENFKYPVEWG--VDLKTEHERYICEKI--VKGPVFLTDYPKEIKAF 361

Query: 337 NRAFCDR 343
                D 
Sbjct: 362 YMRLNDD 368



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 73/213 (34%), Gaps = 29/213 (13%)

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD-MQDGDSCFFIAGDPLKFCSFAAD- 415
           YI   + E+          K  N      +  RL+ + + +       + ++    + + 
Sbjct: 267 YIIKFVLENAPDEM-----KFFNDFIDNGLLERLNSVVNSEFKVMTYTEAIEILKSSKEN 321

Query: 416 --ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                    +L       +    I+  P +  +            F M          +D
Sbjct: 322 FKYPVEWGVDLK-TEHERYICEKIVKGPVFLTD-----YPKEIKAFYMR-------LNDD 368

Query: 474 LLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
             ++ A   D++  G  E+  G  R    E++ Q   +  ++     + +       + G
Sbjct: 369 NKTVAAT--DMLVPGIGELIGGSQREERLEILEQKMKDSNMNI----DDYSWYLDLRRFG 422

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
              HGG   G +R++M L G +N+R+V  FP +
Sbjct: 423 GTKHGGYGLGFERMLMYLTGMQNIRDVLPFPRT 455


>gi|330836851|ref|YP_004411492.1| Asparaginyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748754|gb|AEC02110.1| Asparaginyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 463

 Score =  171 bits (432), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 121/384 (31%), Gaps = 53/384 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M  Y T     +        V   GWV   R    + FL++ D   +  +    D     
Sbjct: 1   MFDY-TRISDLVKKEPSDQIVAAQGWVRTKRDGKTVSFLEVNDGSCLKGLQVVIDR---- 55

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            AK           G  +      + +     Q+E+ A++I ++  A     P+  +R  
Sbjct: 56  -AKISDDILAPVTTGASVVCRGRIVESAGGNQQVEMQAEEIILVGAAPVDTYPLQKKRHT 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E +R +   L  R + +   +  R  +  ++        F+  +TP+++ +  EGA + 
Sbjct: 115 LEFLR-EIAHLRPRTNLMGAVMRVRNTMAYAVHTFFQERGFVYVNTPLISTADAEGAGEQ 173

Query: 181 LVPSRVNQG--------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
              + ++                 F+   A      Q +    A      +   P FR E
Sbjct: 174 FHVTTLDLDHIPRTADGAVDYTKDFFGKMAKLTVSGQLEGETYAMALKNIYTFGPTFRAE 233

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN----------------- 266
           +  + R   EF+ ++ EM+F + +  +   E  L  V                       
Sbjct: 234 NSNTTRHLAEFWMIEPEMAFCDLEGNMQIAEEFLTYVLRTVLEKHEDDMNLFSQFVEPGL 293

Query: 267 ----GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNP 322
                  +   F  + Y DAI     +      P+           S+ +   +      
Sbjct: 294 KDTLWQVIEAPFAHMTYTDAIAELSKNNNKFEYPVSW--------GSDMQSEHERFLTET 345

Query: 323 GYEVWAIPAKGGGGNRAFCDRMNE 346
            ++   I        +AF  ++N+
Sbjct: 346 VWKRPVIVTDYPKEIKAFYMKLND 369



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 4/87 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L     EI  G  R    +V+ +      ++       +       + G  PH G   G 
Sbjct: 380 LAPRLGEIIGGSEREARVDVLEERMRECNLNP----ENYWWYLDLRRFGTVPHAGFGLGF 435

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +R V  + G +N+R+V  FP +    D
Sbjct: 436 ERAVRYVTGMQNIRDVIPFPRAVKSAD 462


>gi|307704413|ref|ZP_07641325.1| asparaginyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307622026|gb|EFO01051.1| asparaginyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 447

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 130/362 (35%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S + 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSHLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|239609470|gb|EEQ86457.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 941

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 73/365 (20%), Positives = 140/365 (38%), Gaps = 27/365 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH-YGITQVVANP----DSACFEIAKSV 65
           +    +G  V     VH +R     ++F+ +R     I  V+A       +   + A+ +
Sbjct: 127 VTPDSIGQEVTFRARVHHIRNMSSKLVFIILRQQITTIQGVLAEKPGAISTLMIQWAEHI 186

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP---- 121
           R   ++ + G++           I    +E+  Q + ++   ++       E E P    
Sbjct: 187 RVGSIVKVKGVLTKSKVPVTGTTIH--DVEIDIQGLHVIVHRQDQIPFSVYEAELPSKDV 244

Query: 122 ----------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
                     +  R   R LDLR DT       ++ + N  R  + A+ FIE  TP L +
Sbjct: 245 SSDGRRNHVLDRTRLSNRILDLRTDTSQSIFRIQSAVSNLFRSSLDAQGFIEIHTPKLQS 304

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           S+ E            + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R  
Sbjct: 305 SATESGASVFEVKYFTREAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHL 362

Query: 232 GEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
            E+  LD+EM+  E   + L  +++VL+ +F+          N ++  +      +  + 
Sbjct: 363 TEYTGLDIEMAIEEHYHEALEIVDSVLKEIFKGIYGRYRREVNIIKNQFPHEDLVWLDET 422

Query: 291 P--DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           P       I + N +      E    ++ L       +  +  +    +    D+  + A
Sbjct: 423 PIIPFTEGIKLLNESGWRRDGEELPINEDLGTRDEIRLGELIKEKYHTDYFILDKFPKAA 482

Query: 349 RSQGQ 353
           R    
Sbjct: 483 RPFYA 487



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 27/170 (15%)

Query: 404 GDPLKFCSFAADARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           G+ L         R+ I   LG +I        +I+D           K   A  PF   
Sbjct: 443 GEELPINEDLG-TRDEI--RLGELIKEKYHTDYFILD-----------KFPKAARPFYAM 488

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           +                  +D+   G EI SGG R H  +++ +   +VGI+   +E   
Sbjct: 489 ED--------PENPDFTNSFDIFVRGQEIVSGGQRIHDEKILEKRMKDVGINPATMEE-- 538

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
                 F+   PPH G   G++R++ML+L   N+R  SLF         +
Sbjct: 539 --YMEGFRWAAPPHAGAGIGLERLIMLILKLGNIRLASLFHRDPKSFQDM 586


>gi|261196496|ref|XP_002624651.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239595896|gb|EEQ78477.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 941

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 73/365 (20%), Positives = 140/365 (38%), Gaps = 27/365 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH-YGITQVVANP----DSACFEIAKSV 65
           +    +G  V     VH +R     ++F+ +R     I  V+A       +   + A+ +
Sbjct: 127 VTPDSIGQEVTFRARVHHIRNMSSKLVFIILRQQITTIQGVLAEKPGAISTLMIQWAEHI 186

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP---- 121
           R   ++ + G++           I    +E+  Q + ++   ++       E E P    
Sbjct: 187 RVGSIVKVKGVLTKSKVPVTGTTIH--DVEIDIQGLHVIVHRQDQIPFSVYEAELPSKDV 244

Query: 122 ----------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
                     +  R   R LDLR DT       ++ + N  R  + A+ FIE  TP L +
Sbjct: 245 SSDGRRNHVLDRTRLSNRILDLRTDTSQSIFRIQSAVSNLFRSSLDAQGFIEIHTPKLQS 304

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           S+ E            + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R  
Sbjct: 305 SATESGASVFEVKYFTREAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHL 362

Query: 232 GEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
            E+  LD+EM+  E   + L  +++VL+ +F+          N ++  +      +  + 
Sbjct: 363 TEYTGLDIEMAIEEHYHEALEIVDSVLKEIFKGIYGRYRREVNIIKNQFPHEDLVWLDET 422

Query: 291 P--DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           P       I + N +      E    ++ L       +  +  +    +    D+  + A
Sbjct: 423 PIIPFTEGIKLLNESGWRRDGEELPINEDLGTRDEIRLGELIKEKYHTDYFILDKFPKAA 482

Query: 349 RSQGQ 353
           R    
Sbjct: 483 RPFYA 487



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 27/170 (15%)

Query: 404 GDPLKFCSFAADARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
           G+ L         R+ I   LG +I        +I+D           K   A  PF   
Sbjct: 443 GEELPINEDLG-TRDEI--RLGELIKEKYHTDYFILD-----------KFPKAARPFYAM 488

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           +                  +D+   G EI SGG R H  +++ +   +VGI+   +E   
Sbjct: 489 ED--------PENPDFTNSFDIFVRGQEIVSGGQRIHDEKILEKRMKDVGINPATMEE-- 538

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
                 F+   PPH G   G++R++ML+L   N+R  SLF         +
Sbjct: 539 --YMEGFRWAAPPHAGAGIGLERLIMLILKLGNIRLASLFHRDPKSFQDM 586


>gi|170761393|ref|YP_001786410.1| aspartyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|169408382|gb|ACA56793.1| aspartate--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 429

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 70/327 (21%), Positives = 133/327 (40%), Gaps = 24/327 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              + L GW+H++R    I FL IRD  G+ Q + + D         V+ E ++ I G+V
Sbjct: 14  NEKINLQGWIHKIRKLRNITFLIIRDRSGLVQCIVDNDKL---DLSQVKIESIVSITGVV 70

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYPESIRFKYRFLDLRR 135
              +             E+  + +EI++ A +       +   E         R L LR 
Sbjct: 71  RESTNALNP-------FEMQVENLEIINAALDKLPIEINKENLEINLDTMLNNRILSLRH 123

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             ++     +  I+N  R  +  E F E  TP +     EG  +          ++ A  
Sbjct: 124 PKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFENTAYLA-- 181

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTME 254
           Q+PQ YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+E+ F+E + DI+   E
Sbjct: 182 QSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDEKDIMEVEE 241

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
            +L+ + E  +       + L    D  + +   + P +     +  +++ +  +     
Sbjct: 242 RLLKFILERLNKECNEYFDLL----DSELPKVEDEIPKITFKEALDILSKEYNKNNLTC- 296

Query: 315 SKILSVNPGYEVWAIPAKGGGGNRAFC 341
                ++P  E           N  F 
Sbjct: 297 ----DLDPEGEKLICKYAKEKLNSDFI 319



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 79/213 (37%), Gaps = 16/213 (7%)

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  DE   +     + K +     +      D+ D +        P      A D  +
Sbjct: 227 IGFIEDEKDIMEVEERLLKFILERLNKECNEYFDLLDSELPKVEDEIPKITFKEALDILS 286

Query: 419 HIAQELGI---INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
               +  +   ++    +          ++ +E+   DF     T        +    L 
Sbjct: 287 KEYNKNNLTCDLDPEGEKLI-------CKYAKEKLNSDFIFL--TNYPRKKRPMYTMPLG 337

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
                 +DL+  G EI +GG R H   +++      G + +  E+       AF+ GMP 
Sbjct: 338 KDGTHSFDLLFRGIEITTGGQRIHDYNMLVDNMKFKGFNPKDYES----YLSAFKYGMPK 393

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           HGG+A G++R+   LLG +NVRE +L    +  
Sbjct: 394 HGGLAIGLERLTSRLLGLENVREATLITRDRTR 426


>gi|148379009|ref|YP_001253550.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153933421|ref|YP_001383393.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153936074|ref|YP_001386940.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|148288493|emb|CAL82572.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152929465|gb|ABS34965.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152931988|gb|ABS37487.1| aspartate--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 429

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 15/254 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              + L GW+H++R    I FL IRD  G+ Q + + D         V+ E ++ + G+V
Sbjct: 14  NEKINLQGWIHKIRKLRNITFLIIRDRSGLIQCIVDNDKL---DLSQVKIESIVSLTGVV 70

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYPESIRFKYRFLDLRR 135
              +             E+  + +EI++ A +       +   E         R L LR 
Sbjct: 71  KESTNALNP-------FEIQVENLEIINAALDKLPIEINKENLEINLDTMLNNRILSLRH 123

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             ++     +  I+N  R  +  E F E  TP +     EG  +          ++ A  
Sbjct: 124 PKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFENTAYLA-- 181

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTME 254
           Q+PQ YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+E+ F+E + DI+   E
Sbjct: 182 QSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDEKDIMEVEE 241

Query: 255 NVLRGVFEEFSNGN 268
            +L+ + E+ +   
Sbjct: 242 RLLKFILEKLNKEC 255



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 80/213 (37%), Gaps = 16/213 (7%)

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  DE   +     + K +     +  +   D+ D +     +  P      A D   
Sbjct: 227 IGFIEDEKDIMEVEERLLKFILEKLNKECKEYFDLLDSELPKIESEIPKITFKEALDILI 286

Query: 419 HIAQELGI---INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
               +  +   ++    +          ++ +E+   DF     T        +    L 
Sbjct: 287 KEYNKNNLTCDLDPEGEKLI-------CKYAKEKLDSDFIFL--TNYPREKRPMYTMPLG 337

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
                 +DL+  G EI +GG R H   +++      G + +  E+       AF+ GMP 
Sbjct: 338 KDGTHSFDLLFRGIEITTGGQRIHDYNMLVDNMEFKGFNPKDYES----YLSAFKYGMPK 393

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           HGG+A G++R+   LLG +NVRE +L    +  
Sbjct: 394 HGGLAIGLERLTSRLLGLENVREAALITRDRTR 426


>gi|71020717|ref|XP_760589.1| hypothetical protein UM04442.1 [Ustilago maydis 521]
 gi|46100477|gb|EAK85710.1| hypothetical protein UM04442.1 [Ustilago maydis 521]
          Length = 583

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 72/343 (20%), Positives = 125/343 (36%), Gaps = 26/343 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              V++ GWVHR+R    + F+ +RD  G  QVV +        A ++ +E  + I G +
Sbjct: 158 DQRVKICGWVHRLRSQKDLTFIVLRDGTGYLQVVLSGKLTTTYDALTLTTESTVEIQGQL 217

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESIRFKYRFLDLR 134
            +            G  EL A   + L  A   +E    V  E   P S+    R L +R
Sbjct: 218 KAVPEG----KTAPGGHELVADYWKCLGKAPGGDEAYTNVVAETADPNSLA-DRRHLVIR 272

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +T    +  R+ ++ + R         E + P +  +  EG           Q ++  L
Sbjct: 273 GETASAVLKVRSEVLKAFRAEFDHLGMTEVTPPCMVQTQVEGGSTLFSFDYYGQPAY--L 330

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y +  + S     F +   FR E   + R   E+  L+ E++F+  DD+L  +E
Sbjct: 331 TQSSQLYLETCLPS-LGDVFCVQESFRAEKSHTRRHLSEYTHLEGELAFISFDDLLEHLE 389

Query: 255 NVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++ G                    N    +  F R+ Y +AI+          +    H
Sbjct: 390 QLICGTLSRVLQDPKTKALLDQLNPNFKMPTRPFRRMDYKEAIKWLNDHNIPNEDG-EPH 448

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
            + +    +  R  +  L+V      +    K     R   D 
Sbjct: 449 KIGDDIAEAAERKMTDELNVPIFLCRFPREIKSFYMKRTEGDE 491



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+    EI  G +R      +L+A+ N GI        F       + G   HGG   G+
Sbjct: 500 LMPGVGEIVGGSMRMADQHELLEAYKNEGI---DAAPYF-WYTDQRKYGTCEHGGYGLGV 555

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R +  L     VRE SL+P     C  
Sbjct: 556 ERFLAWLTNRWTVREASLYPRWTGRCTP 583


>gi|322389677|ref|ZP_08063225.1| asparagine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321143676|gb|EFX39106.1| asparagine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 448

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F+  K +
Sbjct: 15  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEVGLEKFDTIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 75  SQETSVFVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD+AI      
Sbjct: 242 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDEAIDLLQEH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 302 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 339 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 390

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 391 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 446

Query: 570 DL 571
             
Sbjct: 447 KP 448


>gi|163753787|ref|ZP_02160910.1| asparagine--tRNA ligase [Kordia algicida OT-1]
 gi|161326001|gb|EDP97327.1| asparagine--tRNA ligase [Kordia algicida OT-1]
          Length = 480

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 53/295 (17%), Positives = 111/295 (37%), Gaps = 34/295 (11%)

Query: 5   RTHSCGDL-GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEI 61
           ++++  +L     +   V + GWV   R +    F+ + D   I   Q V + ++   +I
Sbjct: 2   KSYTVAELLHSETLLQEVTVKGWVRTFRANR---FIALNDGSTIKNIQCVVDFENTNEDI 58

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGER 118
            K + +   + I G ++    +         ++E+  + I IL  A+   +       +R
Sbjct: 59  LKRIGTGAAVAIKGELIESQGKG-------QKVEVQVKDITILGDADPEEVSKTILQQKR 111

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R +   L  R +T    +  R+ +  ++        F     PI+T S  EGA 
Sbjct: 112 HTLEKLR-EQAHLRTRTNTFSAVMRLRSSLSFAIHKYFNDNGFYYMHAPIITGSDAEGAG 170

Query: 179 DFLVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFR 221
           +    + ++                 F+          Q +    A    + +   P FR
Sbjct: 171 EMFRVTTLDPKNPPLNEEGNVDYTQDFFGKETNLTVSGQLEAETYAMSLGKVYTFGPTFR 230

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            E+  + R   EF+ ++ E++F++ D  ++  E+ ++ V       N     FL 
Sbjct: 231 AENSNTSRHLAEFWMIEPEVAFMDLDGNMDLAEDFMKSVLSYVLEHNADDLAFLE 285



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 14/118 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M           D  +++A   D++  G  EI  G  R    +V+ +  +
Sbjct: 372 DYPANIKAFYMR-------LNEDEKTVRAM--DILFPGIGEIVGGSQREERLDVLKEKMA 422

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + I     E          + G   H G   G +R+VM   G  N+R+V  +P +  
Sbjct: 423 ALDIP----EEELWWYLELRKYGTAVHSGFGLGFERLVMFATGMSNIRDVIPYPRTPQ 476


>gi|149369632|ref|ZP_01889484.1| asparaginyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149357059|gb|EDM45614.1| asparaginyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 480

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 103/276 (37%), Gaps = 27/276 (9%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            + + GWV   R +    F+ I D   I  +    D   FE  +++++       G  + 
Sbjct: 18  EITVKGWVRSFRSNR---FIAINDGSTINNLQCVVDFENFEE-ETLKN----ITTGAAIE 69

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP--VFGEREYPESIRFKYRFLDLRRDT 137
            S   + +      +E+   K+ +L  A+   +   +   + +      +   L +R +T
Sbjct: 70  VSGPLVESQGAGQTVEIQVTKVAVLGKADPEDVKLTILSPKRHTLEKLREQAHLRVRTNT 129

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV----------- 186
               +  R+++  ++        F   + PI+T S  EGA +    + +           
Sbjct: 130 FGAVMRLRSKLSFAVHQYFQENGFYYMNAPIITGSDAEGAGEMFRVTSLPAKNAPLDDDG 189

Query: 187 ---NQGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
               +  F+          Q +    A G  + +   P FR E+  + R   EF+ ++ E
Sbjct: 190 NVNFKEDFFEKETNLTVSGQLEAETYAMGLGKVYTFGPTFRAENSNTSRHLAEFWMIEPE 249

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           ++F + D  ++  E+ ++ V +   +       FL 
Sbjct: 250 IAFCDLDGNMDLAEDFIKYVVKYALDNCQDDLAFLE 285



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 7/98 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
             +D  +++A   D++  G  EI  G  R    +V+L+    +GI K             
Sbjct: 384 LNDDGKTVRAM--DVLFPGIGEIVGGSQREERYDVLLEKMEKMGIPK----EELYWYLDL 437

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + G   H G   G +R+V  + G  N+R+V  +P + 
Sbjct: 438 RKFGTCVHSGFGLGFERLVQFVTGMTNIRDVIPYPRTP 475


>gi|325191469|emb|CCA26242.1| lysyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 536

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 112/259 (43%), Gaps = 23/259 (8%)

Query: 20  FVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPD----------SACFEIAKSVRSE 68
            V L+G +  +R     ++F+D+ +     Q+++                 +I +S+R  
Sbjct: 64  EVSLAGRIMSIRVASKKLVFMDLCNEGQCVQILSEKQYFQGKENNVMEEFHQIHESLRRG 123

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G                G++ +  +K+EIL+     P P          IRF+ 
Sbjct: 124 DIIGVTG---------FPGKSAKGELSIIPRKLEILAPC-TQPFPNDKYGIKNPDIRFRM 173

Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R+LDL  +  +      R +++ S+R  + +  F+E  TP+L AS+     +  V     
Sbjct: 174 RYLDLLVNRDVRSIFETRAKVVRSIRNYLESRGFLEVETPMLFASAGGATAEPFVTKSRA 233

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
            G+   +  AP+ + + L+  GF+R F+I   FR+E   +   P EF   +   ++ + +
Sbjct: 234 LGNDLYIRIAPELFLKQLVIGGFNRVFEIGKVFRNEGIDATHNP-EFTICEFYQAYADYE 292

Query: 248 DILNTMENVLRGVFEEFSN 266
            ++ T E +L  + +  + 
Sbjct: 293 TLMQTAEEMLSEIVKSVTG 311



 Score = 94.4 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 6/117 (5%)

Query: 456 HNPFTMPQGGMESLKGNDLL--SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
           H  F        S    D         +++L   G E+ +     +  ++  + F     
Sbjct: 402 HPTFVYNHPKCMSPLAKDHRQFKGLTERFELFVAGKELCNAYTELNDPDIQRERFEAQLE 461

Query: 514 SK----EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +K               +A + G+PP GG   GIDR+VMLL G  ++RE  LFP  +
Sbjct: 462 NKERGDREAHQMDEDYCKALEYGLPPTGGFGIGIDRLVMLLTGKHHIRESILFPAMR 518


>gi|309807984|ref|ZP_07701910.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308168773|gb|EFO70865.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
          Length = 433

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 69/319 (21%), Positives = 119/319 (37%), Gaps = 34/319 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCI 73
           V   V++  W+   R  G I+FL  RD         +  N     FE AK++R E  L +
Sbjct: 15  VDQEVKMHVWLTDKRSSGKIMFLQFRDGTAFFQAVLLKKNVSEELFEQAKNLRQEASLYV 74

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +                 EL     ++++  +       G +E+       +R L L
Sbjct: 75  TGTINKDERSHF-------GYELQISDFQVVTNND---GYPIGNKEHGIDFLLDHRHLWL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R     ++        FI+   PIL  S+PEG  +       N  ++  
Sbjct: 125 RSKRPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEGTTELFHIEYFNSDAY-- 182

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y   + A  F + F   P FR E+ ++ R   EF+ ++ EM+++ QD+ L   
Sbjct: 183 LSQSGQLY-GEVGAHAFGKIFTFGPTFRAEESKTRRHLTEFWMMEPEMAWMHQDESLEIQ 241

Query: 254 ENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           E +L+ V ++  +                      NF R+ YD+A++       D +   
Sbjct: 242 EGLLKFVTKKILDNCEYELSILGRDPEKLRPTTEGNFARLSYDEAVKMLQDAGRDFKWGD 301

Query: 298 IMH--NVTEHFVHSEFRVF 314
                +        +  VF
Sbjct: 302 DFGAPDEAFISEQYDRPVF 320



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 15/133 (11%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D P +  N        A  PF M +     L+      +    Y       EI  G  R 
Sbjct: 316 DRPVFILN-----YPTAIKPFYMKKNPENPLEYLCADVLAPEGY------GEIIGGSERE 364

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + +       G+  +  E          + G  PH G   G +R +  +    ++RE
Sbjct: 365 EDYDTLKAQIEEAGLDLKDYE----WYLDLRKYGSVPHSGFGIGFERFLGWICKLDHIRE 420

Query: 559 VSLFPMSQNFCDL 571
              FP   N  + 
Sbjct: 421 AIPFPRLINRLEP 433


>gi|269126358|ref|YP_003299728.1| aspartyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268311316|gb|ACY97690.1| aspartyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 436

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 74/326 (22%), Positives = 138/326 (42%), Gaps = 30/326 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSVRS 67
           DL    +   V + GWV+ +R    + F+ +RD  G+ Q+         E+    +++ +
Sbjct: 8   DLR-DHLDQTVTVCGWVNALRLQRKMQFVILRDPTGMVQITHKRGGEGDELEQAIEALTT 66

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           E  + I G V+       N  +  G +E+  +++E++  AE        + +     R  
Sbjct: 67  ESAVVITGRVVD------NPIVKLGGLEIVPERVEVVGKAEASLPI---DEKSGMEHRLD 117

Query: 128 YRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           +RFLD+R R +       +T     +R    AE F E  TP L  ++ E   +       
Sbjct: 118 WRFLDIRLRPSSRLLFDVQTTFEAGLREYAYAEGFTEMHTPKLMGTASESGAEVFKLGYF 177

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
              ++ A  Q+PQ YKQ+ +A+G +R F+I P FR E   + R   EF  +D+EM++++ 
Sbjct: 178 GGDAYLA--QSPQFYKQMAVAAGIERVFEIGPVFRAEPSFTSRHATEFTGVDVEMAWIDD 235

Query: 247 -DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD--KPDLRNP-IIMHNV 302
            +D++   E +L     + ++ +  +              YG D   P +  P + M   
Sbjct: 236 VEDVMAFEERMLAHAIAKVADVHGEAIR----------EHYGVDLKVPTVPFPRLTMAEA 285

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWA 328
            E      +    +   ++P  E   
Sbjct: 286 QEILRARGWDPAGEKEDLDPEGERAI 311



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 30/142 (21%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           HIA++ G       EF +I  +P             +  PF   +               
Sbjct: 314 HIAEQTG------HEFVFITHYP------------ASIRPFYHMRPKDRPDL-------- 347

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G E+ +G  R H  +V+ +  +  G+    +++        F+ G PPHGG
Sbjct: 348 TLSFDLLWKGLEVTTGAQREHRYDVLCKQAAEKGLDTAPMQD----YMNIFRFGTPPHGG 403

Query: 539 IAAGIDRIVMLLLGAKNVREVS 560
           +  G+ R+++ +L   ++RE +
Sbjct: 404 LGMGLGRLLVAMLNLDSIREAT 425


>gi|322805344|emb|CBZ02908.1| aspartyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 429

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 15/254 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              + L GW+H++R    I FL IRD  G+ Q + + D         V+ E ++ I G+V
Sbjct: 14  NEKINLQGWIHKIRKLRNITFLIIRDRSGLIQCIVDNDKL---DLSQVKIESIVSITGVV 70

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYPESIRFKYRFLDLRR 135
           +  +             E+  + +EI++ A +       +   E         R L LR 
Sbjct: 71  IESTNALNP-------FEIQVENLEIINAALDKLPIEINKENLEINLDTMLNNRILSLRH 123

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             ++     +  I+N  R  +  E F E  TP +     EG  +          ++ A  
Sbjct: 124 SKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAEGGTEVFKVKYFENTAYLA-- 181

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTME 254
           Q+PQ YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+E+ F+E + DI+   E
Sbjct: 182 QSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDEKDIMEVEE 241

Query: 255 NVLRGVFEEFSNGN 268
            +L+ + E+ +   
Sbjct: 242 RLLKFILEKLNKEC 255



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 80/213 (37%), Gaps = 16/213 (7%)

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
           I +  DE   +     + K +     +  +   D+ D +     +  P      A D   
Sbjct: 227 IGFIEDEKDIMEVEERLLKFILEKLNKECKEYFDLLDSELPKIESEIPKITFKEALDILI 286

Query: 419 HIAQELGI---INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
               +  +   ++    +          ++ +E+   DF     T        +    L 
Sbjct: 287 KEYNKNNLTCDLDPEGEKLI-------CKYAKEKLDSDFIFL--TNYPREKRPMYTMPLG 337

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
                 +DL+  G EI +GG R H   +++      G + +  E+       AF+ GMP 
Sbjct: 338 KDGTHSFDLLFRGIEITTGGQRIHDYNMLVDNMEFKGFNPKDYES----YLSAFKYGMPK 393

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           HGG+A G++R+   LLG +NVRE +L    +  
Sbjct: 394 HGGLAIGLERLTSRLLGLENVREAALITRDRTR 426


>gi|114639524|ref|XP_522122.2| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           isoform 2 [Pan troglodytes]
          Length = 477

 Score =  170 bits (431), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 112/258 (43%), Gaps = 19/258 (7%)

Query: 12  LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           LG  +  G  +++ GW+  VR    ++FL + D   +  +    DS     ++ +     
Sbjct: 34  LGAQNASGERIKIQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGL--DSRELTFGSS 91

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++   ++  N       +EL A+KI+++   +    P+  +  +P     ++  
Sbjct: 92  VEVQGQLIKSPSKRQN-------VELKAEKIKVIGNCDAKDFPIKYKERHPLEYLRQHPH 144

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-----R 185
              R + L   +  R+    ++        F+   TPI+T++  EGA +          +
Sbjct: 145 FRCRTNVLSSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLK 204

Query: 186 VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           V + +F+   A      Q    +M+  F + F   P FR E+ +S R   EFY ++ E+S
Sbjct: 205 VPEENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEIS 264

Query: 243 FVEQ-DDILNTMENVLRG 259
           FV+   D++  +E + + 
Sbjct: 265 FVDSLQDLMQVIEELFKA 282



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 27/157 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           AD R     E  ++        +++++P                PF M            
Sbjct: 345 ADLRTE--HEKYLVKHCGNIPVFVINYPL------------TLKPFYMRDNED------G 384

Query: 474 LLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                A   DL+  G  E+  GG+R      + +  +  G+++      +       + G
Sbjct: 385 PQHTVA-AVDLLVPGVGELFGGGLREERYHFLEERLARSGLTEV-----YQWYLDLRRFG 438

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             PHGG   G +R +  +LG  N+++V  FP   + C
Sbjct: 439 SVPHGGFGMGFERYLQCVLGVDNIKDVIPFPRFPHSC 475


>gi|293374948|ref|ZP_06621244.1| asparagine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325844314|ref|ZP_08168090.1| asparagine--tRNA ligase [Turicibacter sp. HGF1]
 gi|292646425|gb|EFF64439.1| asparagine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325489181|gb|EGC91563.1| asparagine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 463

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 63/353 (17%), Positives = 117/353 (33%), Gaps = 51/353 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVLCID 74
               V ++GWV   R      FL I D      + A    +   F+  +  R    + + 
Sbjct: 17  ANQVVEINGWVRNNRAQKAFGFLMINDGSFFETIQAVYEENLENFKEVQKFRVGSAVTVR 76

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           GLV                 E+  Q++ IL        P+  ++   E +R +   L  R
Sbjct: 77  GLVYPTPGSKQP-------FEIKVQEV-ILEGDCPENYPIQPKQHTREFLR-EVAHLRPR 127

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN------- 187
            +        R+ +  ++      +NF+   TPI+T S  EGA +    + ++       
Sbjct: 128 TNLFSAVFRVRSLVAYAIHSYFQEKNFVYVHTPIITGSDAEGAGEMFQVTTLDFNNVPRT 187

Query: 188 -------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                  +  F+A         Q +    A      +   P FR E+  + R   EF+ +
Sbjct: 188 EEGAVDFKQDFFAKSTNLTVSGQLEAETFALALRDVYTFGPTFRAENSNTQRHAAEFWMI 247

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------------------NFLR 276
           + E++F +  D ++  E +++ +                                 +F R
Sbjct: 248 EPEIAFADLQDDMDLAEGMIKYIINYVLENAPEEMKFFNQFVSKGVLDRVKAVAESDFKR 307

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           + Y +AI           NP+   +   TEH  +    VF   + V    +  
Sbjct: 308 LPYTEAIEILLKADKKFENPVSWGIDLSTEHERYLTDEVFKAPVFVTDYPKDI 360



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 54/147 (36%), Gaps = 26/147 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  + +       ++ D+P        K I      F M          +D  ++ A  
Sbjct: 338 HERYLTDEVFKAPVFVTDYP--------KDIKA----FYMR-------LNDDQKTVAAM- 377

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  E+  G  R    E++ Q    +G+ K              + G   H G  
Sbjct: 378 -DLLVPGVGELIGGSQREERLEILEQRMDEIGVPK----EELDWYLDLRRYGGVKHAGFG 432

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G +R++M + G +N+R+V  FP +  
Sbjct: 433 LGFERMIMYITGVENIRDVVPFPRTPK 459


>gi|329298731|ref|ZP_08256067.1| asparaginyl-tRNA synthetase [Plautia stali symbiont]
          Length = 466

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 73/389 (18%), Positives = 122/389 (31%), Gaps = 58/389 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC---FEIAKSVRSEWVLC 72
           V S V + GWV   R    G+ F+ + D      V A  +++     +    + +   + 
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGLSFIAVYDGSCFNPVQAVVNNSLNNYQDEVLRLTTGCSVI 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V+    E           EL A ++E+    ++        + +      +   L 
Sbjct: 76  VTGKVVESPGEGQA-------FELQATQVEVTGWVDDPDTYPMAAKRHSIEYLREVAHLR 128

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R + +      R  +  ++        +   STP++TAS  EGA +    S ++  +  
Sbjct: 129 PRTNIVGAVARVRHTLAQALHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDLENLP 188

Query: 193 ALPQA-----------------PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
             PQ                    Q      A    + +   P FR E+  + R   EF+
Sbjct: 189 RDPQGNVDFDKDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTSRHLAEFW 248

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--------------LRICYDD 281
            L+ E++F   DD     E +L  VF+           F                I  D 
Sbjct: 249 MLEPEVAFATLDDAAALAEAMLNYVFKAVLEERADDMAFFAERVDKEAIARLERFITTDF 308

Query: 282 AIRRYGTDKPD--------LRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           A   Y TD  D          NP+   M   +EH  +   + F   + V           
Sbjct: 309 AQVDY-TDAVDILLKSGQSFENPVSWGMDLSSEHERYLAEKHFKAPVVVKNYPTDI---- 363

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 364 -KAFYMRMNDDGKTVAAMDVLAPGIGEII 391



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+    + +G++K      +       +
Sbjct: 371 NDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLNARLAEMGLNK----EDYWWYRDLRR 425

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 426 YGTVPHAGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 462


>gi|187777691|ref|ZP_02994164.1| hypothetical protein CLOSPO_01283 [Clostridium sporogenes ATCC
           15579]
 gi|187774619|gb|EDU38421.1| hypothetical protein CLOSPO_01283 [Clostridium sporogenes ATCC
           15579]
          Length = 463

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 74/432 (17%), Positives = 144/432 (33%), Gaps = 68/432 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWV 70
               +   V+++GWV  VR      F+++ D      V          F+    +     
Sbjct: 13  TEKYMDKEVKINGWVRTVRDSKNFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G+V                 E+ A ++ I   +     P+  +R   E +R     
Sbjct: 73  VEVEGIVQPTPN-------AKQPFEIKATRVSIEGKSSTDY-PLQKKRHTFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++        F+  +TPI+T S  EGA +    + ++   
Sbjct: 124 LRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDLNN 183

Query: 190 -------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+   A      Q      A  F   +   P FR E+  + R   E
Sbjct: 184 IPKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHASE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSN 272
           F+ ++ EM+F E  D L+  E++++ V                            N +++
Sbjct: 244 FWMIEPEMAFAELTDYLDNAEDMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDNVINS 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           +F RI Y +A+            P+   +   TEH  +   ++F K + V    +     
Sbjct: 304 DFKRITYTEAVELLQKSGAKFDYPVEWGIDLQTEHERYLTEQIFKKPVFVTDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR 390
                  +AF  R+N+  ++     L          G    +G   +   +   E     
Sbjct: 361 -------KAFYMRLNDDGKTVAAADLLV-------PGVGEIIGGSQREERLDVLEKRMEE 406

Query: 391 LDMQDGDSCFFI 402
           L++   D  +++
Sbjct: 407 LNLNKEDYWWYL 418



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 24/138 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P        K I      F M        + ND     A    LV    EI 
Sbjct: 349 KPVFVTDYP--------KDIKA----FYM--------RLNDDGKTVAAADLLVPGVGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+ +    + ++K      +       + G   H G   G +RI+M + G
Sbjct: 389 GGSQREERLDVLEKRMEELNLNK----EDYWWYLELRKYGETKHSGYGLGFERILMYITG 444

Query: 553 AKNVREVSLFPMSQNFCD 570
             N+R+V  FP +    +
Sbjct: 445 MTNIRDVIPFPRTPGSAE 462


>gi|110004269|emb|CAK98607.1| putative asparaginyl-trna synthetase protein [Spiroplasma citri]
          Length = 455

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 103/267 (38%), Gaps = 19/267 (7%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHY---GITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           S V + GWV   R    + FL + D      +  V      A F    S+R    + + G
Sbjct: 16  SEVTILGWVRSNRSSSKLGFLVMNDGTVFDNVQIVYRPEQLANFLAISSLRISSAIKVVG 75

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
                 +            E+ A  IEIL  A E       ++E+      +   L  + 
Sbjct: 76  KFCLTPS-------AKQPFEIQASVIEILDEATEDYPLQ--KKEHSYEYLREIAHLRAKT 126

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVNQG---SF 191
           +T +     R+    ++       NFI   TPI+T +  EGA + F+V +R +      F
Sbjct: 127 NTFNAVFRIRSSSSFAIHEFFNKNNFIYVHTPIITGNDAEGAGESFIVTTRTDDNYNEDF 186

Query: 192 YALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           +    +     Q      A  F   +   P FR E+  + R   EF+ ++ E++F++ ++
Sbjct: 187 FGKKASLTVSGQLHAEGFAQAFRNVYTFGPTFRAENSNTTRHAAEFWMIEPEIAFIDLEE 246

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFL 275
            +  +E +++ +       N+    FL
Sbjct: 247 NMALIEKMIKHIINYLFVNNSHELAFL 273



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 6/97 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   DL+  G  E+  G +R +  + ++   + + I    ++          +
Sbjct: 360 NDDNKTVA-ACDLLVPGIGELVGGSVRENDYDKIVNRCNELKIPTIDLQ----WYIDLRK 414

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G     G   G +R VM + G  N+R+V  FP +  
Sbjct: 415 YGYYKSAGFGLGFERFVMYVTGMTNIRDVIPFPRTPR 451


>gi|145299800|ref|YP_001142641.1| asparaginyl-tRNA synthetase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142852572|gb|ABO90893.1| asparaginyl-tRNA synthetase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 481

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 65/388 (16%), Positives = 117/388 (30%), Gaps = 56/388 (14%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKS---VRSEWVLC 72
           VG+   + GW+   R    GI FL + D      V A   +           + +   + 
Sbjct: 31  VGTTQTVKGWIRTRRDSKAGISFLAVSDGSCFHPVQAVVPNTLANYENEVLRLTTACSVE 90

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G+V +               EL A  ++++   E+        + +      +   L 
Sbjct: 91  VSGVVAASQGSGQA-------FELQATDVKVVGWVEDPDTYPMAAKRHSIEYLREQAHLR 143

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----- 187
            R + +      R  +  ++      E ++  + P++TAS  EGA +    S ++     
Sbjct: 144 PRTNIVGAVTRVRNCLAQAIHRFFHEEGYLWIAAPLITASDTEGAGEMFRVSTLDLENLP 203

Query: 188 ---------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+          Q      A    + +   P FR E+  + R   EF+
Sbjct: 204 RTDAGKVDYDKDFFGKETFLTVSGQLNVETYACALSKVYTFGPTFRAENSNTSRHLAEFW 263

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-------------------- 275
            ++ E++F   DD     E +L+ VF            F                     
Sbjct: 264 MVEPEIAFANLDDNAALAEAMLKYVFNAVLAERRDDLEFFAQHVDKDAIGRLERFVSSDF 323

Query: 276 -RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            +I Y DAI            P+   +   +EH  +     F   + V    +       
Sbjct: 324 AQIDYTDAIEVLKNCGKKFEFPVSWGIDLSSEHERYLAEEHFKSPVVVKNYPKDI----- 378

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                R   D     A     PG+  I 
Sbjct: 379 KAFYMRLNDDGKTVAAMDVLAPGIGEII 406



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 71/210 (33%), Gaps = 33/210 (15%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN---------- 428
           L     + +   +  +  D   F A    K           ++ +   I+          
Sbjct: 280 LAEAMLKYVFNAVLAERRDDLEFFAQHVDK--DAIGRLERFVSSDFAQIDYTDAIEVLKN 337

Query: 429 -CNCFEF--CWIMDFPFYEWNEEEKKIDFAHNPFTM----PQGGMES---LKGNDLLSIK 478
               FEF   W +D      + E ++     +  +               ++ ND     
Sbjct: 338 CGKKFEFPVSWGID-----LSSEHERYLAEEHFKSPVVVKNYPKDIKAFYMRLNDDGKTV 392

Query: 479 AFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           A   D++  G  EI  G  R    EV+ Q  + +G++K      +       + G  PH 
Sbjct: 393 A-AMDVLAPGIGEIIGGAQREERLEVLDQRMAEMGLNK----EDYWWYRDLRRFGTVPHA 447

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G   G +R+V+ + G  NVR+V  FP +  
Sbjct: 448 GFGLGFERLVVYVTGMGNVRDVIPFPRTPR 477


>gi|169335764|ref|ZP_02862957.1| hypothetical protein ANASTE_02189 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258502|gb|EDS72468.1| hypothetical protein ANASTE_02189 [Anaerofustis stercorihominis DSM
           17244]
          Length = 463

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 126/353 (35%), Gaps = 52/353 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE---WV 70
            S     + ++GW+  +R      F++I D      V    +    +  + V        
Sbjct: 13  KSYENKEITINGWIKTIRSSNQFGFIEINDGTNFKNVQVVVEKDSIDNYEEVTKFHASSG 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G+++           +    E+ A K+ +L  A+        ++ +      +   
Sbjct: 73  IEVNGILVLTPD-------MKQDFEIKATKVSLL--ADSDGSYPLQKKRHSFEYLREIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R ++ +     R+ I  ++       +F+  +TP++TAS  EGA +    + ++   
Sbjct: 124 LRPRGNSFNAVFRLRSLISFAIHEFFQTRDFVYVNTPLITASDCEGAGEMFQVTTLDMKN 183

Query: 190 -------------SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q +    A  F   +   P FR E+  + R   E
Sbjct: 184 PPLNEEDSIDYTKDFFGAETYLTVSGQLQAEAYALAFKNVYTFGPTFRAENSNTPRHAAE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGV--------------FEEFSNGNTVSN------- 272
           F+ ++ E++F + +D ++  E++++ V              F +F +   V         
Sbjct: 244 FWMVEPEIAFADLNDDMDLAEDLMKYVINYALEKAGNEIEFFNKFVDKGLVERLKGIVNS 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPG 323
            F RI Y +AI        +   P+   +   TEH  +   + F   + V   
Sbjct: 304 TFKRISYTEAIEILEKADVEFEYPVKWGLDLQTEHERYLTEKHFGAPVFVTDY 356



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 69/210 (32%), Gaps = 35/210 (16%)

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
            F +  + G V  +  +  +              ++  D  F                  
Sbjct: 284 FFNKFVDKGLVERLKGIV-NSTFKRISYTEAIEILEKADVEFEYPVKW--------GLDL 334

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
               E  +   +     ++ D+P     +E K        F M           D  ++ 
Sbjct: 335 QTEHERYLTEKHFGAPVFVTDYP-----KEIK-------AFYMRMND-------DNKTVA 375

Query: 479 AFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           A   DL+  G  EI  G  R    +V++     +G++   ++          + G   H 
Sbjct: 376 AV--DLLVPGVGEIIGGSQREERYDVLVSRMEELGMNSGSMD----WYLDLRKYGGVKHA 429

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G   G +R++M L G KN+R+V  FP + N
Sbjct: 430 GFGLGFERLIMYLSGMKNIRDVIPFPRTVN 459


>gi|262341118|ref|YP_003283973.1| lysine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
 gi|262272455|gb|ACY40363.1| lysine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
          Length = 496

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 70/327 (21%), Positives = 134/327 (40%), Gaps = 22/327 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV----LCID 74
             + ++G + R+R  G   F +I+DH G  Q+  + D    +      +  +    L   
Sbjct: 48  ETISIAGRLMRLRILGKASFGEIKDHTGCIQIYFSKDHLYSDKMGKEDTYNIFFKKLIDI 107

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------YPESIRF 126
           G ++  +       +   +I + A K+ +LS +      V  +++             R+
Sbjct: 108 GDIIGVTGFLFRTKM--NEITIHAHKLTLLSKSIRPLPQVKIDKKNKKTYDAFSNTEQRY 165

Query: 127 KYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R++DL  +   K I  KRTRII  +R  +  + ++E  TPIL +      AR F    
Sbjct: 166 RMRYVDLIVNDHVKEIFLKRTRIIQGIRKFLDDKGYLEVDTPILQSIPGGAIARPFETYH 225

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y L  A + Y + L+  GF   ++ +  FR+E       P EF  L+  +++ 
Sbjct: 226 NTLGIPLY-LRIANELYLKRLIIGGFHGVYEFSKNFRNEGMDRIHNP-EFTVLEFYIAYK 283

Query: 245 EQDDILNTMENVLRGVFEEFSNGNT--VSNNFLRICYDDAIRRY-GTDKPDLRNPIIMHN 301
           +   ++N  E +++ ++ +F   +       F RI   D+I++Y G D   +     +  
Sbjct: 284 DYYWMMNFTEQLMKCIWNQFKEKDHISFQTPFPRIPILDSIKKYTGFDLEKMEEE-ELRK 342

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWA 328
           V +     E    SK   +   +E   
Sbjct: 343 VCKKLHIEENPKMSKAKLIENIFEEKC 369


>gi|169344439|ref|ZP_02865408.1| aspartyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169297359|gb|EDS79468.1| aspartyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 429

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 15/251 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            + +   V + GW++++R    I F+ IRD  G+ Q VA  + +      ++  E V+ I
Sbjct: 10  KNHLNENVCIKGWIYKIRRLKFITFIIIRDRSGLVQCVAENEKS---DLSNLTLESVVSI 66

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYPESIRFKYRFL 131
           +G +        +        E+  + IEI++ A+E       +   +         R L
Sbjct: 67  EGTLKESKNSLNS-------FEIQVENIEIINKAKEELPIEVNKETLDINLDTMLNNRML 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR   ++     +  I +S R  +  E F E  TP +     EG  +          ++
Sbjct: 120 SLRHKKINAIFKVQNIITDSFREFLNKEGFTEIHTPKIVKEGAEGGTEVFEVKYFENKAY 179

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DIL 250
            A  Q+PQ YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+EM F+E + DI+
Sbjct: 180 LA--QSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEMGFIENEFDIM 237

Query: 251 NTMENVLRGVF 261
           N  EN+L+ + 
Sbjct: 238 NLEENLLKFIL 248



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 6/127 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            Y++ +E+   DF     T        +            +DL+  G EI +GG R H  
Sbjct: 306 LYKYAKEKLNSDFLFL--TNYPRKKRPMYTMPKGEKGTHSFDLLFRGIEITTGGQRIHDY 363

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E++++     G++    E+        F+ GMP HGG+A G++RI   +LG +NVRE +L
Sbjct: 364 EMLVENMKYKGLNPNSYES----YLELFKLGMPKHGGLAIGLERITARILGLENVREATL 419

Query: 562 FPMSQNF 568
               +  
Sbjct: 420 ITRDRKR 426


>gi|324508990|gb|ADY43790.1| Asparaginyl-tRNA synthetase [Ascaris suum]
          Length = 549

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 58/298 (19%), Positives = 108/298 (36%), Gaps = 22/298 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           + + G  V +  WVHR+R  G  + F+ +RD  G  Q V +        A ++ +E  + 
Sbjct: 121 LKNRGKRVCVKAWVHRLRRQGKALMFIVLRDGTGFLQTVLSDKLCQTYDAVTLNTESTVI 180

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G +                 EL     E++  A    +      E         R L 
Sbjct: 181 VYGTLQEVPEG----KTAPDGHELIVDYWELIGAAPAGGIDCVLNEEAGVDTMLDNRHLV 236

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +   + +  R  +  +MR    A  + E S P L  +  EG           + S+ 
Sbjct: 237 IRGEKAARVLRIRAAVTRAMREHFHAAGYTEISPPTLVQTQVEGGSTLFALDYFGEPSY- 295

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  + S     + IA  +R E  R+ R   E+  ++ E +F+  D+++  
Sbjct: 296 -LTQSSQLYLETCLPS-LGDVYCIAQSYRAEKSRTRRHLAEYSHVEAECAFLTFDELMEK 353

Query: 253 MENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +E+++    +                 +       F+R+ Y DAI+            
Sbjct: 354 IESLVCDTVDRLMADPVTKAMIEFVNPDFTPPKRPFMRLRYGDAIKWLQEHDVKNEFG 411



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 11/115 (9%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
            +       F M +   ++     +         L+    EI  G +R    + +++AF 
Sbjct: 439 NRFPAGIKAFYMQRDAEDNTLTESVDL-------LMPTVGEIVGGSMRIWKEDDLIKAFE 491

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              IS       +       + G  PHGG   G++R V  L    ++R+V L+P 
Sbjct: 492 GAQISP----EHYYWYVDQRKYGTCPHGGYGLGLERFVCWLTNTYHIRDVCLYPR 542


>gi|291297601|ref|YP_003508879.1| lysyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290566821|gb|ADD39786.1| lysyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 1100

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 65/290 (22%), Positives = 118/290 (40%), Gaps = 25/290 (8%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RT +CG +          ++ G FV ++G V  +R HG + F  IRD  G  QV+   DS
Sbjct: 645 RTLACGQVARDFPDLPPDANTGRFVAVAGRVMLLRHHGKLSFATIRDWTGDLQVMVVGDS 704

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +   +V     L ++G V++            G++ + ++K  + +     PLP   
Sbjct: 705 ---DFRHTVDIGDHLGVEGEVVTSKR---------GELSVLSKKWTLTAKCL-HPLPDKH 751

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
                   + + R LDL      +  ++ R  +I+S+R  +  + ++E  TPIL A    
Sbjct: 752 LGLADPEAKVRQRHLDLIVSPQARTDLRARGAVIHSLRTGLHDDGYLEVETPILQAIHGG 811

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+          Y L  AP+ Y + L   G ++ F++   FR+E       P EF
Sbjct: 812 ANARPFVTHINAYDMRLY-LRIAPELYLKRLCVGGVEKVFELGRTFRNEGVSFKHNP-EF 869

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
             L+   S+ + + +      ++R       +   ++ +   I       
Sbjct: 870 TMLEAYQSYADYNTMRELTMRLVRQAAVAAFDTTVITRDDHEIDLAADWP 919



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 52/161 (32%), Gaps = 28/161 (17%)

Query: 414  ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                  + + L  +        +  DFP             + +P T        L    
Sbjct: 962  GAIVLEMYERL--VEHATTAPTFYSDFP------------TSVSPLTRQHRTDPRL---- 1003

Query: 474  LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAF 529
                 A ++DLV  G EI +            +  +   +                  A 
Sbjct: 1004 -----AERWDLVAFGTEIGTAYSELIDPVEQRRRLTEQSLLAAGGDPEAMELDEDFLAAL 1058

Query: 530  QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            +  MPP GG+  G+DR+VMLL G   +R+   FP+ +   D
Sbjct: 1059 EYAMPPTGGLGIGVDRLVMLLTG-NGIRQTLPFPLVKPTVD 1098


>gi|308502742|ref|XP_003113555.1| CRE-KARS-1 protein [Caenorhabditis remanei]
 gi|308263514|gb|EFP07467.1| CRE-KARS-1 protein [Caenorhabditis remanei]
          Length = 596

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 109/264 (41%), Gaps = 10/264 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
                   V ++G +H  R  G  ++F DI       Q++AN      ++     +    
Sbjct: 121 NEQVAEEIVSVAGRIHSKRESGSKLVFYDIHGEGTRIQIMANAKFHTGDV--DFVTLHDR 178

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G ++  +          G++ L  +++  L+      LP        + +RF+ R+L
Sbjct: 179 IKRGDIVGFTG--QATRTKAGELSLIPKEVLQLTPCL-HMLPHSHFGLKDKELRFRKRYL 235

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQG 189
           DL     +  N V R++II  +R  +    F+E  TPI+   +    A+ F+        
Sbjct: 236 DLILNPRIKDNFVIRSKIITFLRRYLDNLGFLEVETPIMNQIAGGATAKPFITHHNDLDM 295

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           + + L  AP+ Y ++L+  G DR +++   FR+E       P EF   +  M++ + +D+
Sbjct: 296 NLF-LRVAPELYHKMLVVGGIDRVYEVGRLFRNEGIDLTHNP-EFTTCEFYMAYADYEDV 353

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN 273
           +   E++L  +         +  +
Sbjct: 354 IQLTEDLLSSMVLAIKGTYKIEYH 377



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 8/111 (7%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++L     EIA+     +      Q F      K+  ++           A + 
Sbjct: 484 PGLTERFELFAVTREIANAYTELNDPITQRQRFEQQAKDKDAGDDEAQMIDETFCNALEY 543

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF----PMSQNFCDLLMGSPST 578
           G+PP GG   GIDR+ M+L    N++EV LF    P           +PST
Sbjct: 544 GLPPTGGWGMGIDRLSMILTDNNNIKEVLLFPAMRPEDGTEKKPEGDAPST 594


>gi|305662675|ref|YP_003858963.1| lysyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304377244|gb|ADM27083.1| lysyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 516

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 70/327 (21%), Positives = 133/327 (40%), Gaps = 34/327 (10%)

Query: 2   HRYR-THSCGDLGVS----DVGSFVR----LSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           +RY  T S  D+       + G   +    ++G V  +R HG I+F  + D     Q+V 
Sbjct: 22  YRYEVTASIADIRKRYAHLNSGEETKDVYSIAGRVMGLRRHGKIVFGVLSDGTENIQLVF 81

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
             D     + K V    V  + G V  R  +T+      G++ +  +   +LS+      
Sbjct: 82  RYDIVGERLWKLVEILNVGDVIG-VRGRPIKTLR-----GELSILVEDFRVLSIT-WRDY 134

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRT-RIINSMRCRMIAENFIECSTPILTA 171
           P           R++ R+LD+  +   +N +  T +I  + R  + +  FIE  TP L  
Sbjct: 135 PEKWHGIVDSEKRYRLRYLDIMLNEKVRNAIISTYKIEKAFRDFLDSRGFIEIHTPKLQP 194

Query: 172 SSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F+        + Y L  AP+ Y +  + +   + ++IA CFR+ED  +   
Sbjct: 195 IYGGALARPFITKMYALDKTLY-LSIAPETYLKRAVVANLFKVYEIAVCFRNEDIDAQHY 253

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS--------------NNFLR 276
           P EF Q+++  +F + +D++  +EN++    ++      +                 + R
Sbjct: 254 P-EFVQIEIYQAFADWNDMMELVENMIAYAVKQTFGDYKIEVLRDTGERVELDFKPPWRR 312

Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           I  +D+I  +   K   +    +  + 
Sbjct: 313 ISLEDSIEIFSGIKIKNKEYDELIEIA 339



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 10/99 (10%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM--------LQAFSNVGISKEVVENRFG 523
            D     + ++++   G EI +G    +   V                            
Sbjct: 389 EDPR--YSERFEIFLMGLEIGNGYSELNNPVVQYYFFKKEEDLRSRARAKEDLEYHPMDK 446

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              RA + GMPP  G+  GI R+VM LLG  ++++V  F
Sbjct: 447 DYVRALEYGMPPTAGVGIGIYRLVMQLLGLSSIKDVIPF 485


>gi|126667156|ref|ZP_01738130.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
           [Marinobacter sp. ELB17]
 gi|126628312|gb|EAZ98935.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
           [Marinobacter sp. ELB17]
          Length = 514

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 74/356 (20%), Positives = 144/356 (40%), Gaps = 32/356 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           + +Y  +S   L   D+   V ++G +   R    ++    +D  G  QV A+ D    +
Sbjct: 51  LEKYADYSKQQL--EDMAIPVAIAGRMMLDRKAFKVV----QDVTGRMQVYASKDVQ--K 102

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K      ++ + G +++RS +        G + ++     +L+ +   PLP   +   
Sbjct: 103 ATKHWDLGDIIGVSG-ILARSGK--------GDLYVTMDDYLLLTKSLR-PLPEKHKGLT 152

Query: 121 PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGAR 178
               R+++R++DL  +   + +   R++II +MR  +   +F+E  TP+L        AR
Sbjct: 153 DTESRYRHRYVDLMVNEDSRRVFLARSKIITAMRQFLADRDFMEVETPMLQVIPGGATAR 212

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++
Sbjct: 213 PFMTHHNALGIDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMVE 270

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              ++ + +D+++  E++LR + E+    + V N        DA       + D      
Sbjct: 271 FYQAYADYNDLMDLTEDMLRSIAEQVLGSSLVVN-----TAVDADGNETRIEYDFGKTFD 325

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWA-----IPAKGGGGNRAFCDRMNEWAR 349
              V +  V     V ++ L+        A           G  +   +   E A 
Sbjct: 326 RLTVVDAIVRYNENVSAEQLADETFARQMAKDLGVKVKNSWGLGKVHIEIFEETAE 381



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 6/151 (3%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +A++LG+   N +    +     +E    E ++         P+      +  D      
Sbjct: 354 MAKDLGVKVKNSWGLGKV-HIEIFE-ETAEHRLMQPTFITEYPKEVSPLARCKDSNPFVT 411

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPP 535
            +++    G EIA+G    + +E   + F      K+  ++           A + GMPP
Sbjct: 412 ERFEFFVGGREIANGFSELNDAEDQAERFRAQVAEKDAGDDEAMFYDEDYVMALEYGMPP 471

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             G   GIDR+ MLL  + ++R+V LFP  +
Sbjct: 472 TAGEGIGIDRLAMLLTNSASIRDVILFPAMR 502


>gi|315038481|ref|YP_004032049.1| asparaginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276614|gb|ADQ59254.1| asparaginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|327183675|gb|AEA32122.1| asparaginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 432

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 70/324 (21%), Positives = 120/324 (37%), Gaps = 28/324 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      FE AK++R E 
Sbjct: 10  SSKHVDQEVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFETAKTLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G +   +             E+    ++++S  E       G +E+       +R
Sbjct: 70  SFYITGTIHEDARSHF-------GYEIQITDLKVVSNNE---GYPIGNKEHGVDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +  +       E FI+   PI   S+PEG          +  
Sbjct: 120 HLWLRSKKPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVDYFDYD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           L+  E  L  + ++  + N           +  ++  G D   LR P    N T      
Sbjct: 237 LDIQERYLAYMVKQVLDKN-----------EYELKILGRDPEKLR-PTTEGNFTRLPYDD 284

Query: 310 EFRVFSKILSVNPGYEVWAIPAKG 333
             ++           + +  P +G
Sbjct: 285 AVKMLQDAGRDFKWGDDFGAPDEG 308



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 46/140 (32%), Gaps = 22/140 (15%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G I+       +I+++P             +  PF M +      +      I    Y  
Sbjct: 308 GYISEQYDRPVFIVNYP------------TSIKPFYMKKNPDNPKEYLCADVIAPEGY-- 353

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
                EI  G  R    EV+ Q     G++ E  +          + G  PH G   G +
Sbjct: 354 ----GEIFGGSEREGNYEVLKQQILAAGLNLEDYQ----WYLDLRKFGGVPHSGFGMGFE 405

Query: 545 RIVMLLLGAKNVREVSLFPM 564
           R +  +    ++RE   FP 
Sbjct: 406 RTIAWVCHLDHIREAIPFPR 425


>gi|15903440|ref|NP_358990.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116515635|ref|YP_816831.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|38258368|sp|Q8CWQ4|SYN_STRR6 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|122278323|sp|Q04JK7|SYN_STRP2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|15459048|gb|AAL00201.1| Asparaginyl-tRNA synthetase (asparagine--tRNA ligase)
           [Streptococcus pneumoniae R6]
 gi|116076211|gb|ABJ53931.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 447

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 130/362 (35%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II           F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYVTYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|224133182|ref|XP_002327980.1| predicted protein [Populus trichocarpa]
 gi|222837389|gb|EEE75768.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 61/354 (17%), Positives = 114/354 (32%), Gaps = 55/354 (15%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           D G+  VG  + + GWV  +R    + F+++ D   ++ +    D       +    E  
Sbjct: 109 DEGLDRVGKTIIVMGWVRTLRVQSSVTFIEVNDGSCLSNLQCVMDLEAEGYDQ---VESG 165

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L   G  +      + +     ++EL   KI  +  ++        ++            
Sbjct: 166 LVTTGASIWMQGTVVKSQGSKQKVELKVIKIVAVGKSDPSYPIQ--KKRVSREFLRTKAH 223

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T       R  +  +         F+  S+PI+TAS  EGA +    + +  G 
Sbjct: 224 LRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCEGAGEQFCVTTLIPGS 283

Query: 190 -----------------------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDE 223
                                   F+  P       Q      A+     +   P FR E
Sbjct: 284 QEAANSPVDGIPKTKDGLIDWSQDFFGKPAFLTVSGQLNAETYATALSDVYTFGPTFRAE 343

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------- 267
           +  + R   EF+ ++ E++F + +D +      L+ V                       
Sbjct: 344 NSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYVVRHILENCKEDMEFFNTWIEKGI 403

Query: 268 -----NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVF 314
                + V  +F+++ Y DAI      K     P+       +EH  +    VF
Sbjct: 404 IDRLSDVVEKDFVQLTYTDAIELLLKAKKKFEFPLEWGCDLQSEHERYITEEVF 457



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 4/102 (3%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    LV    E+  G  R    E +      + ++K      F      
Sbjct: 476 MRQNDDGKTVAAMDMLVPRVGELIGGSQREERLEYIEDRLDELKLNK----ESFWWYLDL 531

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            + G  PH G   G +R+V    G  N+R+   FP      +
Sbjct: 532 RRYGSVPHAGFGLGFERLVQFATGIDNIRDAIPFPRVPGSAE 573


>gi|149183582|ref|ZP_01862003.1| lysyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848698|gb|EDL62927.1| lysyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 405

 Score =  170 bits (431), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 58/312 (18%), Positives = 119/312 (38%), Gaps = 17/312 (5%)

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +EI  +     ++ + G V              G++ + A++  +L+ A   PLP     
Sbjct: 11  YEIFNTADLGDLIGVTGTVFKTKV---------GELSIKAKEFILLTKALR-PLPEKFHG 60

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG- 176
                 R++ R+LDL      K     R++II SMR  +    ++E  TP++ A +    
Sbjct: 61  LKDVEQRYRQRYLDLITSQESKQTFIARSKIIQSMRRYLDNNGYLEVETPMMHAIAGGAS 120

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  
Sbjct: 121 ARPFITHHNALDMQLY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTM 178

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +++  ++ +  DI+   EN++  + +E     TV      +  +    R      D    
Sbjct: 179 IELYEAYADYRDIMALTENLIAHIAKEVFGSTTVQYGDYEVNLEPQWARLHMV--DAVKE 236

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP-G 355
               +  +     E    +K   +     +           +   D++ +     G P  
Sbjct: 237 HTGADFWKEMSDEEAHALAKEHGIEVKPTMQYGHILNEFFEQKVEDKLIQPTFIYGHPVE 296

Query: 356 LAYIFWRLDESG 367
           ++ +  + DE G
Sbjct: 297 ISPLAKKNDEDG 308



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   E+K I      +  P       K ND       +++L   G E A+     +  
Sbjct: 275 FFEQKVEDKLIQPT-FIYGHPVEISPLAKKNDEDGRFTDRFELFIVGREHANAFTELNDP 333

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F +    +E   +           A + GMPP GG+  GIDR+VMLL  + ++R
Sbjct: 334 IDQRERFESQLKEREEGNDEAHMMDDDFIEALEYGMPPTGGLGIGIDRLVMLLTNSPSIR 393

Query: 558 EVSLFPMSQNF 568
           +V LFP+ ++ 
Sbjct: 394 DVLLFPLMRHR 404


>gi|91091536|ref|XP_970641.1| PREDICTED: similar to Asparaginyl-tRNA synthetase CG10687-PA
           [Tribolium castaneum]
 gi|270000923|gb|EEZ97370.1| hypothetical protein TcasGA2_TC011193 [Tribolium castaneum]
          Length = 550

 Score =  170 bits (431), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 130/349 (37%), Gaps = 23/349 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G       V++ GWVHR+R  G  ++F+ +RD  G  Q V          A  + +E  +
Sbjct: 122 GKEFRDQRVKIYGWVHRLRRQGKNLMFITLRDGTGFLQSVLTDKLCQTYNALVLSTESSV 181

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  EL+    E++ +A           +    ++ + R +
Sbjct: 182 LLYGSLKKVPEG----KTAPGGHELAVDYWELVGLAPPGGADSILNEQALPDVQAENRHI 237

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R+ ++ + R   +   + E + P +  +  EG           + ++
Sbjct: 238 MIRGENTSKILRMRSVLLQAFRDHYLDRGYCEVTPPSIVQTQCEGGSTLFKMDYFGEEAY 297

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  + S     F IA  FR E  R+ R   E+  ++ E  F+  +D+L+
Sbjct: 298 --LTQSSQLYLETCLPS-MGDVFCIAESFRAEQSRTRRHLAEYTHVEAECPFISFNDLLD 354

Query: 252 TMENVLRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            +E+++  V +                +    +  FLR+ Y DAI     +     +   
Sbjct: 355 RLEDLICDVVDRVLKSPYGDIVHELNPDFQVPTRPFLRMNYSDAIDYLKKNNITKEDG-S 413

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
            +   E       R  +  ++       +    K    ++   D R+ E
Sbjct: 414 FYEFGEDIPEMPERKMTDQINKPIMLCRFPANIKSFYMSKCPEDARLTE 462



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   ++     +         L+ N  EI  G +R H  E ++  +  
Sbjct: 441 RFPANIKSFYMSKCPEDARLTESVDV-------LLPNVGEIVGGSMRIHNLEELMDGYKR 493

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI        +       + G  PHGG   G++R V  LL   ++REV L+P 
Sbjct: 494 EGIDPTP----YFWYTDQRKYGTCPHGGYGLGLERFVCWLLNRYHIREVCLYPR 543


>gi|17535925|ref|NP_495454.1| lysyl (K) tRNA Synthetase family member (krs-1) [Caenorhabditis
           elegans]
 gi|14574222|gb|AAK68395.1|U41105_14 Lysyl (k) trna synthetase protein 1, isoform b [Caenorhabditis
           elegans]
          Length = 596

 Score =  170 bits (431), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 10/264 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
               V   V ++G +H  R  G  ++F DI       Q++AN      ++   V     +
Sbjct: 121 KEQVVEEIVSVAGRIHSKRESGSKLVFYDIHGEGTHIQIMANAKFHTGDV-DFVTLHDRI 179

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
               +V      T       G++ L   +I  L+      LP        + +RF+ R+L
Sbjct: 180 KRGDIVGFTGRAT---RTKAGELSLIPNEILQLTPCL-HMLPHSHFGLKDKELRFRKRYL 235

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQG 189
           DL     +  N V R++II  +R  +    F+E  TPI+   +    A+ F+        
Sbjct: 236 DLILNPRVKDNFVIRSKIITFLRRYLDNLGFLEVETPIMNQIAGGATAKPFITHHNDLDM 295

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           + + L  AP+ Y ++L+  G DR +++   FR+E       P EF   +  M++ + +D+
Sbjct: 296 NLF-LRVAPELYHKMLVVGGIDRVYEVGRLFRNEGIDLTHNP-EFTTCEFYMAYADYEDV 353

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN 273
           +   E++L  +         +  +
Sbjct: 354 IQLTEDLLSSMVMSIKGTYKIEYH 377



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 4/95 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++L     EIA+     +      Q F      K+  ++           A + 
Sbjct: 484 PGLTERFELFAVTREIANAYTELNDPITQRQRFEQQAKDKDAGDDEAQMIDETFCNALEY 543

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP GG   GIDR+ M+L    N++EV LFP  +
Sbjct: 544 GLPPTGGWGMGIDRLSMILTDNNNIKEVLLFPAMR 578


>gi|303289054|ref|XP_003063815.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226454883|gb|EEH52188.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 692

 Score =  170 bits (431), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 109/257 (42%), Gaps = 12/257 (4%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
            + ++G +   R  G  + F D+R      QV+A+   A     + +         G ++
Sbjct: 125 KISVAGRLMSKRASGTKLYFYDLRGDGVKVQVMADAKMATEYDFEKINMSTR---RGDIV 181

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                        G++ +    +E+L+    +     G ++  +  R++ RFLDL  +  
Sbjct: 182 GIRG--YAGKSKRGELSIFPCHLEVLTPCLHMLPGFSGLKD--QETRYRKRFLDLIMNPE 237

Query: 139 HK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
            +   + R+ II S+R  +  ++F+E  TP++        A+ F+        + Y +  
Sbjct: 238 VRDIFITRSNIIRSIRKYLDDQDFVEVETPMMNMIPGGATAKPFITHHNDLDMTLY-MRI 296

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + + L+  G DR ++I   FR+E       P EF   +  M++ + +D++   E++
Sbjct: 297 APELFLKELVVGGMDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYMAYADYEDLMKMTEDL 355

Query: 257 LRGVFEEFSNGNTVSNN 273
           + G+         V  +
Sbjct: 356 VSGMVLRLKGSYKVMYH 372



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 4/87 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGI 539
           +  N  E+ +     +   V  + F++    K   ++           A + G+PP GG 
Sbjct: 502 MFVNKRELCNAYTELNDPIVQRERFADQAKQKGAGDDEAMTVDETFCEALEYGLPPTGGW 561

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             GIDR+ MLL    N++EV LFP  +
Sbjct: 562 GLGIDRLTMLLTDTANIKEVLLFPAMK 588


>gi|297566296|ref|YP_003685268.1| aspartyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296850745|gb|ADH63760.1| aspartyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 423

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 71/282 (25%), Positives = 125/282 (44%), Gaps = 19/282 (6%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
            VG  V L G++H  R  GGI F  +RD  GI QVV               +E  + + G
Sbjct: 12  HVGEQVSLLGFLHWKRDLGGIQFALVRDRSGIVQVVVEKG------VDLPLAESSIRVTG 65

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YPESIRFKYRFLDL 133
            V+  +          G  E+ A  IE++S A E       + E         +YR++ L
Sbjct: 66  KVVENAK-------APGGYEVLANGIEVVSAALEPSPIEIPKEEWRVNPETLLEYRYVSL 118

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +     +  +  ++   R  + A+ F E  TP + ++  EG  +        + ++ A
Sbjct: 119 RGEKARAALQVQAALVRGFRNYLDAQGFTEIYTPKIVSAGAEGGSNLFGIDYFEKRAYLA 178

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNT 252
             Q+PQ YKQ +M   ++R +++AP FR E+  + R   E+  LD+EM F+ ++ ++++ 
Sbjct: 179 --QSPQLYKQ-IMVGVYERVYEVAPVFRAEEHATSRHLNEYLSLDVEMGFIQDEFEVIDL 235

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            EN+LR + EE  +        L + + +          + R
Sbjct: 236 EENLLRAMLEEARHTTPKQLAMLEVEWPNTQEMPRLSHAEAR 277



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 28/155 (18%)

Query: 419 HIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
              + LG      +  +F ++  +P                PF     G          +
Sbjct: 295 EAERALGAYAKEKWGVDFLFVTKYP------------QVARPFYAYPEG----------N 332

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
                +DL+  G EI SGG R H  EV+++   N G         F G    F+ GMPPH
Sbjct: 333 GVTRGFDLLFRGLEITSGGQRVHQYEVLIEQLRNKGNDP----ANFAGYLEVFKYGMPPH 388

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG A G +R+   LLG  NVR    FP  ++    
Sbjct: 389 GGFAIGAERLTQKLLGLPNVRYARAFPRDRHRLTP 423


>gi|26554296|ref|NP_758230.1| lysyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|39932207|sp|Q8EUS8|SYK_MYCPE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|26454305|dbj|BAC44634.1| lysyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 489

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 72/298 (24%), Positives = 127/298 (42%), Gaps = 29/298 (9%)

Query: 5   RTHSCGD-------LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           RT + GD       L   +  + ++L+G V  +R      F  IRD YG TQ   N    
Sbjct: 34  RTMTIGDFNSKFAKLKTHNTNNNIKLAGRVVALRQ----TFGVIRDFYGDTQFYLNKKKV 89

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
              + +       L     +              G++ L  +KI+I+S A + PLP    
Sbjct: 90  SKSMLEYFNKVLDLGDIVEIFGSP-----FRTQKGELTLDVKKIKIVSKALK-PLPEKWH 143

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS-SPE 175
               E +R ++R++DL  +     +   R RI+  +R  M ++N++E  TP+L       
Sbjct: 144 GLEDEELRARHRYVDLIVNKDSMKVFVDRIRILKIIRQFMDSQNYLEVETPVLHPILGGA 203

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+      + +FY L  A +   + L+  GFD+ ++I   FR+E   S   P EF 
Sbjct: 204 NARPFITFHNTLERNFY-LRIATELPLKKLIVGGFDKVYEIGRIFRNEGMDSTHNP-EFT 261

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFS--------NGNTVSNNFLRICYDDAIRR 285
            +++  ++   + ++   EN+ + V +           N   ++  F RI   D I++
Sbjct: 262 SMEVYAAYENMEYMMRLTENLFKYVAKSLKKPVVKMGENEIYLTQKFRRIHMVDFIKQ 319



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 49/132 (37%), Gaps = 9/132 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLL-SIKAFQYDLVCNGFEIASGGIRNH 499
           F+E   E K I      F       +  L   D        +++L  N  E A+     +
Sbjct: 359 FFEEFCEAKCIQPT---FVYGHPIDVSPLSKKDYKNPGFTKRFELFINTKEYANAFAELN 415

Query: 500 MSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F      K    +           A + G+PP  G+  GIDR++ML     +
Sbjct: 416 DPIDQYERFEAQVKEKSLGNDEAVEMDMDFIEALEYGLPPTAGLGVGIDRMIMLFTEKSS 475

Query: 556 VREVSLFPMSQN 567
           +R+V LFP  ++
Sbjct: 476 IRDVLLFPHMKD 487


>gi|225429870|ref|XP_002283440.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 544

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 69/287 (24%), Positives = 114/287 (39%), Gaps = 29/287 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRD-HYGITQV-VANPD---SACFEIA 62
            G L        V + G    +R  G  I FL +R   + +  V    PD       + A
Sbjct: 86  IGALTEDLKDQKVLIRGRAQTIRAVGKNIAFLVVRQMGFTVQCVLTVAPDLVSRHMVKYA 145

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG------ 116
             +  E  + I+G++   S   +     T Q+E+  +K+  +S AE LP+ +        
Sbjct: 146 TGLSRESHVDIEGII---SVPGVPIKGATQQVEVQVRKLYGISKAENLPINIEDAARSES 202

Query: 117 -----------EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
                           +  R  YR LDLR          + ++ N  R  +++E F+   
Sbjct: 203 EIEKALQAGEQLVRVNQDTRLNYRVLDLRTPANQAIFRVQCQVENIFRQFLLSEGFVGIH 262

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP L   S EG           +G    L Q+PQ +KQ+ +   F R F+I P FR ED 
Sbjct: 263 TPKLIGGSSEGGSAVFRLDY--KGQPACLAQSPQLHKQMAICGDFGRVFEIGPVFRAEDS 320

Query: 226 RSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVS 271
            + R   EF  LD+EM   E   ++++ ++ +   +F+  +      
Sbjct: 321 FTHRHLCEFTGLDVEMEIKEHYFEVMDIVDRLFVAMFDSLNENCKKE 367



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   A  PF       + L         +  +D+   G EI SG  R H+ + + +    
Sbjct: 436 RYPLAVRPFYTMPSYDDPL--------YSNSFDVFIRGEEIISGAQRVHVPDFLEKRAEA 487

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI  + +         +F+ G PPHGG   G++R+VML     N+R+ SLFP       
Sbjct: 488 CGIDVKTIST----YIDSFRYGAPPHGGFGVGLERVVMLFCALNNIRKTSLFPRDPTRIA 543

Query: 571 L 571
            
Sbjct: 544 P 544


>gi|15026660|gb|AAK81488.1|AE007853_3 Aspartyl/asparaginyl-tRNA synthetase [Clostridium acetobutylicum
           ATCC 824]
          Length = 479

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 18/259 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
               +   V+L GWVH++R  G I F+ +RD  GI Q V +         K ++ E V+ 
Sbjct: 63  TEKKLEEVVKLQGWVHKLRKLGKIAFVLLRDRTGIIQCVVDAKKI---DVKELKLESVVE 119

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--PESIRFKYRF 130
           I+G+V              G+ E+    I+ LS A E       + +         + R 
Sbjct: 120 IEGIVKENE----------GRFEIQVNSIKTLSKALEKIPIEINKEDMELNIDTLIENRI 169

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L +R   ++      T I +     ++   F E  TP + +   EG  +       ++ +
Sbjct: 170 LSMRNSRVNSVFKIETEIAHGFSEFLVKNGFTEIYTPKIVSEGAEGGTELFKLKYFDKEA 229

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDI 249
           + A  Q+PQ YKQ+++A+G++R F+I   +R E   + R   E+  +D+EM F+ ++ D+
Sbjct: 230 YLA--QSPQFYKQMMVAAGYERVFEIGHVYRAESHDTKRHLNEYISMDLEMGFINDEMDL 287

Query: 250 LNTMENVLRGVFEEFSNGN 268
           +     +L+ +F+      
Sbjct: 288 IRFEIELLKYIFQNVRQKC 306



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 4/118 (3%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K +      T        +            +DL+  G EI +GG R +  +++ Q+  +
Sbjct: 363 KYNSDFVFLTHYSKDKRPMYTMPCGKNLTHSFDLIFRGMEITTGGQRINDYDMLRQSMLD 422

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G+        F      F+ GMPPHGG+A G++RI + LL   N+RE + F   +  
Sbjct: 423 KGLKV----ESFKSYLDVFKFGMPPHGGLAIGLERITIKLLNLDNIREAAFFVRDKKR 476


>gi|297621580|ref|YP_003709717.1| lysyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297376881|gb|ADI38711.1| lysyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 525

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 71/343 (20%), Positives = 127/343 (37%), Gaps = 33/343 (9%)

Query: 1   MHR-YRTHSCGDLGVSDVGSF--VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           MH+ Y     G    +  G    V +SG +   R  G   F  I+DH G  QV+ N D  
Sbjct: 44  MHQEYDGQQIGHSEDAAAGETPSVTVSGRLVLFRAMGKNAFAQIQDHTGRIQVMFNRDQT 103

Query: 58  CFEIAKSVRSEWVLCID--------GLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
             E   S        I         G ++             G++ + A+K+ +L     
Sbjct: 104 ALEGYHSENPNDSKPIKLIEKKFDLGDIIGIEGNLFFTQ--KGELTIYAKKVTLLCKTLL 161

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                       +  R++ R+LDL   + +     KR++I++ +R     ++FIE  TP+
Sbjct: 162 PLAD-KHSGLADKETRYRKRWLDLITHEEVRSTFRKRSKILSMIRRFFENQDFIEVETPV 220

Query: 169 LTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L +      AR F+          Y +  + +   + L+  G D+ F+I   FR+E    
Sbjct: 221 LQSIYGGAEARPFVTKLNALDQEMY-MRISLEIPLKKLIVGGMDKVFEIGRVFRNEGIDR 279

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------TVSN 272
              P EF  L+   +  + +D++ TMEN++  +  E                     V  
Sbjct: 280 THNP-EFTLLEAYAAHWDYNDMMRTMENLVEKLALELHGTTLLKVTDPESGKEAEIDVKA 338

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
            + R+   ++I  Y     D  +   ++ +     H E +   
Sbjct: 339 PWKRMTMKESINTYANIDVDALSDEELYKLVLECSHLEAKKIK 381



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 46/129 (35%), Gaps = 7/129 (5%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            +E   E   I   H    P              +       +++    G E ++     
Sbjct: 392 LFEHKVEPHLIQPHHITDFPIETTPLCKPHRDPAEREKGIVERFESFIMGGEFSNAYTEL 451

Query: 499 HMSEVMLQAFSNVGISKEVVENR---FGG-LYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +   +  Q  +     K   +     F      A   GMPP GGI  GIDR+VMLL  + 
Sbjct: 452 NDPVIQYQLLAEQAARKATGDEEANPFDHEFVEAICQGMPPTGGIGIGIDRLVMLLTHST 511

Query: 555 NVREVSLFP 563
           ++R+V  FP
Sbjct: 512 SIRDVLFFP 520


>gi|145541363|ref|XP_001456370.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124424181|emb|CAK88973.1| unnamed protein product [Paramecium tetraurelia]
          Length = 563

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 56/298 (18%), Positives = 101/298 (33%), Gaps = 30/298 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWV 70
           G   +G  V ++GWV  VR    + F+++ D   +G  Q+V       FE      + + 
Sbjct: 106 GEGYIGQTVTVAGWVRTVRDQKNLCFIELNDGTSFGGLQIVVEDKIGNFEQVAKTNTGFS 165

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G ++   A+     ++         ++ I+  A+    P+    + PE++R K   
Sbjct: 166 LKVTGNIVKSPAKGQLIEML--------HEVVIIGQADPEEYPMAKGVQKPETLRQK-AH 216

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +        R  +  +          +   TPI+T S  EGA +    S +    
Sbjct: 217 LRPRGNFFSAVTRIRNNLAYATHVFFQNNGCLYIHTPIITGSDCEGAGEMFRISTIFDND 276

Query: 191 FYALPQ-------------------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
              +PQ                      Q +           +   P FR E   + R  
Sbjct: 277 ISKIPQIKGKVDTAQDFFKKEVNLTVSGQLQVEHFCISMSNVYTFGPTFRAEKAHTHRHL 336

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
            EF+ ++ E +F +  D +   E  ++         N     FL       +  Y  D
Sbjct: 337 AEFWMIEPEFAFADLFDNMEAAEGYVKFCINYILQNNIDDLQFLDKRVKPGLIDYLKD 394



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 16/124 (12%)

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P + ++            F M  G        D          L+    E+  G  R   
Sbjct: 449 PVFLYD-----YPKEIKAFYMKVG-------TDDGKCVRAMDMLIPQVGELIGGSQREER 496

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            +V+ Q     G+        +G      + G  PH G   G +R+VM++ G +N+R+V 
Sbjct: 497 YDVLAQRIKECGLKL----EDYGPYMDLRKYGTVPHCGFGLGFERLVMMVTGVENIRDVI 552

Query: 561 LFPM 564
            FP 
Sbjct: 553 PFPR 556


>gi|256828075|ref|YP_003156803.1| asparaginyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256577251|gb|ACU88387.1| asparaginyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 460

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 71/432 (16%), Positives = 149/432 (34%), Gaps = 68/432 (15%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEW 69
           L  ++V S V + GWV   R     +FL+I D   +  +    +  +  FE    + +  
Sbjct: 11  LSEAEVESLV-VQGWVRTKRESKEFVFLEINDGSCLKNLQAIVDAGAVGFEHMDRIGTGA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G ++    +         + EL A+++++L  A+    P+  +R   E +R    
Sbjct: 70  AVSLTGTLVESPGQG-------QKWELKARELKVLGEADATY-PLQKKRHTDEYLR-TIA 120

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-- 187
            L  R +        R  +   +      + F     PI+T S  EGA +    + ++  
Sbjct: 121 HLRPRTNKFGALNRIRAELSYGVHQFFREQGFFNVHAPIITGSDCEGAGEMFQVTTLDLS 180

Query: 188 -----------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+    +     Q     +A    R +   P FR E+  + +   E
Sbjct: 181 NVPKKNGKADFDQDFFGKEASLTVSGQLAAENLACALGRVYTFGPTFRAENSNTPKHAAE 240

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------N 272
           F+ ++ EM+F    D ++  E+ ++ +     +                           
Sbjct: 241 FWMIEPEMAFAGLSDNMDLGESCIKWLITHLMDHCRDDLELFGNFVDKGLFATLDNILAK 300

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
            F+R+ Y +A+    +       P+       TEH  +     F + + V    +     
Sbjct: 301 PFIRLPYAEAVTILKSASRTFEFPVDFGTDLQTEHERYLTEDHFKQPVIVFDYPKEI--- 357

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR 390
                  +AF  R+N+  ++ G      +   +   G +  +G  A+   +   E     
Sbjct: 358 -------KAFYMRLNDDDKTVGA-----MDVLVPRIGEL--IGGSAREERLDVLERRIEE 403

Query: 391 LDMQDGDSCFFI 402
           L +   D  +++
Sbjct: 404 LGLPKEDYWWYL 415



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 10/158 (6%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP-----FTMPQGGME-SL 469
            R   A+ + I+      F + +DF      E E+ +   H       F  P+      +
Sbjct: 303 IRLPYAEAVTILKSASRTFEFPVDFGTDLQTEHERYLTEDHFKQPVIVFDYPKEIKAFYM 362

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
           + ND          LV    E+  G  R    +V+ +    +G+ K      +       
Sbjct: 363 RLNDDDKTVGAMDVLVPRIGELIGGSAREERLDVLERRIEELGLPK----EDYWWYLDLR 418

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + G  PH G   G +R++ML+ G  N+R+V  FP +  
Sbjct: 419 RFGSVPHAGFGMGFERLLMLVTGIANIRDVIPFPRTPR 456


>gi|316972747|gb|EFV56401.1| asparaginyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 852

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 68/324 (20%), Positives = 129/324 (39%), Gaps = 24/324 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            ++G  V+L GWVHR+R  G  +IF+ +RD  G  Q V          A  + +E  + I
Sbjct: 426 ENMGCRVKLFGWVHRLRRQGKQMIFIVLRDGTGYLQCVLTGAMCQIYDALILATESSISI 485

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G++    A         G  EL A    ++  +    +      E    ++ + R + L
Sbjct: 486 TGILNDLPAG----KEAPGGCELQADFWTLIGRSPPGGVEAVLNEESHPDVQLEQRHIAL 541

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R + + K +  R  ++ + R      N+ E + P L  +  EG       +   Q ++  
Sbjct: 542 RGEHMTKLMRLRAALMKAFRDHYYDRNYCEVTPPTLVQTQVEGGSTLFSFNYYGQTAY-- 599

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  + S     + IA  +R E  R+ R   E+  ++ E  F+  +++L  +
Sbjct: 600 LTQSSQLYLETCIPS-LGDVYCIAMSYRAEKSRTRRHLSEYTHVEAECPFITFENLLERI 658

Query: 254 ENVLRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRY---GTDKPDLRNPI 297
           E+++  V +                N       F R+ Y +AI+     G  K D    +
Sbjct: 659 EDIVCDVVDRVMKSPFGYLVKELNPNFKPPQKPFRRMAYLEAIKWLNDNGVKKEDGSEFV 718

Query: 298 IMHNVTEHFVHSEFRVFSKILSVN 321
           +  ++ E          ++ + +N
Sbjct: 719 VGDDIPEAPERHMTDTLNEPILLN 742



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 13/123 (10%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAF 508
            +       F M     +      +        DL+  G  EI  G +R    + +L AF
Sbjct: 742 NRFPKTLKSFYMNPCADDPTLTESV--------DLLLPGVGEIVGGSMRIWDEKELLDAF 793

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
               I+       +       + G  PHGG   G++R +  L G  ++RE  L+P   + 
Sbjct: 794 KRNSINV----EPYYWYTEQRKYGTCPHGGYGLGLERFLTWLAGLHHIRETVLYPRFVDR 849

Query: 569 CDL 571
           C  
Sbjct: 850 CTP 852


>gi|291320609|ref|YP_003515874.1| Lysyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752945|emb|CBH40920.1| Lysyl tRNA synthetase [Mycoplasma agalactiae]
          Length = 489

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 67/322 (20%), Positives = 129/322 (40%), Gaps = 29/322 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSAC 58
           ++ Y + S  +L   ++   V ++G +  VR      FL ++D  G+ QV  N   D   
Sbjct: 42  VNNYDSFSREELEEKNI--SVNVAGRLMTVRGP----FLVLKDSKGLVQVYFNKKSDENV 95

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            +I  +     +L + G VM            T  + L   KIE+L+ A + PLP     
Sbjct: 96  AKIVGTFDIGDILWVSGTVM---------KTHTNALTLKCNKIELLTKALK-PLPEKYHG 145

Query: 119 EYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                 R++ R++DL  +   KN  + RT+II  ++      +++E  TP L       A
Sbjct: 146 LVDTEERYRRRWVDLITNEESKNKFILRTKIIKWIKEYFDNLDYLEVETPFLQDYVSGAA 205

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                    +    + L  A +   +  +  G +R +++   FR+E   +   P EF  +
Sbjct: 206 AKPFTTHHNSLNQEFVLRIATEIPLKKCVVGGLERVYELGRIFRNEGYDTTHNP-EFTTI 264

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV--------SNNFLRICYDDAIRRY-GT 288
           +   ++   + +++  E + + + ++      V        S  F RI   DA+    G 
Sbjct: 265 EFYEAYSNVEGMMDRTEELFKVLCQKLGKSVFVNNGTEVDLSKPFKRINMVDAVNEKTGR 324

Query: 289 DKPDLRNPIIMHNVTEHFVHSE 310
           D  ++     +    +H +  E
Sbjct: 325 DFRNISLDEAILEAKKHNIKIE 346



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 56/147 (38%), Gaps = 7/147 (4%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           A++  I     +    I++   YE   E   I          +    S K +D       
Sbjct: 338 AKKHNIKIEKFWTTGHIINA-LYEELVESSLIQPTFIYGHPIEVSPLSAKASDPR--FTE 394

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPH 536
           + +L  N  E A+           L+ F +    K+   +           A + GMPP 
Sbjct: 395 RAELFINTKEYANMYTELSDPIDQLERFKSQIDEKKAGNDEASDIDWDFVDALEYGMPPT 454

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GG   GIDR++MLL    ++R+V LFP
Sbjct: 455 GGCGIGIDRLIMLLTETSSIRDVLLFP 481


>gi|309803988|ref|ZP_07698070.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|309807267|ref|ZP_07701237.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|312871781|ref|ZP_07731869.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312873007|ref|ZP_07733067.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312874136|ref|ZP_07734170.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|312875635|ref|ZP_07735636.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|315653550|ref|ZP_07906470.1| asparagine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325912180|ref|ZP_08174578.1| asparagine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325912564|ref|ZP_08174947.1| asparagine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|329920287|ref|ZP_08277071.1| asparagine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|308163907|gb|EFO66172.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308166327|gb|EFO68536.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|311088889|gb|EFQ47332.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311090206|gb|EFQ48616.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311091529|gb|EFQ49913.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092723|gb|EFQ51079.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|315488912|gb|EFU78554.1| asparagine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325476130|gb|EGC79298.1| asparagine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325477985|gb|EGC81114.1| asparagine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|328936332|gb|EGG32780.1| asparagine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 433

 Score =  170 bits (430), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 69/319 (21%), Positives = 118/319 (36%), Gaps = 34/319 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCI 73
           V   V++  W+   R  G I+FL  RD         +  N     FE AK++R E  L +
Sbjct: 15  VDQEVKMHVWLTDKRSSGKIMFLQFRDGTAFFQAVLLKKNVSEELFEQAKNLRQEASLYV 74

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +                 EL     ++++  +       G +E+       +R L L
Sbjct: 75  TGTINKDERSHF-------GYELQISDFQVVTNND---GYPIGNKEHGIDFLLDHRHLWL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R     ++        FI+   PIL  S+PEG  +       N  ++  
Sbjct: 125 RSKRPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEGTTELFHIEYFNSDAY-- 182

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y   + A  F + F   P FR E+ ++ R   EF+ ++ EM+++ QD+ L   
Sbjct: 183 LSQSGQLY-GEVGAHAFGKIFTFGPTFRAEESKTRRHLTEFWMMEPEMAWMHQDESLEIQ 241

Query: 254 ENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           E +L+ V +   +                      NF R+ YD+A++       D +   
Sbjct: 242 EGLLKFVTKRILDNCEYELSILGRDPEKLRPTTEGNFARLSYDEAVKMLQDAGRDFKWGD 301

Query: 298 IMH--NVTEHFVHSEFRVF 314
                +        +  VF
Sbjct: 302 DFGAPDEAFISEQYDRPVF 320



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 15/133 (11%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D P +  N        A  PF M +     L+      +    Y       EI  G  R 
Sbjct: 316 DRPVFILN-----YPTAIKPFYMKKNPENPLEYLCADVLAPEGY------GEIIGGSERE 364

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + +       G+  +  E          + G  PH G   G +R +  +    ++RE
Sbjct: 365 EDYDTLKAQIEEAGLDLKDYE----WYLDLRKYGSVPHSGFGIGFERFLGWICKLDHIRE 420

Query: 559 VSLFPMSQNFCDL 571
              FP   N  + 
Sbjct: 421 AIPFPRLINRLEP 433


>gi|332685897|ref|YP_004455671.1| asparaginyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332369906|dbj|BAK20862.1| asparaginyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 464

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 63/369 (17%), Positives = 122/369 (33%), Gaps = 58/369 (15%)

Query: 1   MHRYRTHSCGDLGVSD---VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           MH   T    DL  +        V ++GW+  VR      F+++ D   +  V    D +
Sbjct: 1   MH---TVRIKDLYENLHLFDNQEVEINGWIRTVRGSKKFGFIELNDGSFLKNVQIVLDRS 57

Query: 58  ---CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
               ++    +     + I G+V+S               E+ AQ++ +   +       
Sbjct: 58  VIGNYDEVVKLPISSTIKIVGIVVSTPD-------AKQAFEIQAQRVILEGTSNSEYPLQ 110

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
             ++++          L  R  T +     R+ +  ++       +F+   TP++T+S  
Sbjct: 111 --KKKHSYEYLRTIAHLRPRTSTYYSVFRIRSLVSYAIHRFFQERDFVYVHTPLITSSDS 168

Query: 175 EGARDFLVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIA 217
           EGA +    + ++                 F+          Q      A  F   +   
Sbjct: 169 EGAGEMFRVTTLDLNNLPKTETGEVDNSEDFFRRQTNLTVSGQLPAEAFALAFGNTYTFG 228

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-- 275
           P FR E+  + R   EF+ ++ EM+F +  D ++  E +L  V E           FL  
Sbjct: 229 PTFRAENSHTARHASEFWMIEPEMAFADLTDSMDIAEALLHYVIEYVLEKAPEELEFLTQ 288

Query: 276 -------------------RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVF 314
                              R+ Y +AI            P+   +   TEH  +    +F
Sbjct: 289 NIDQGLLTRLRETAKTSFARVTYSEAIELLQKSNHTFDYPVTWGIDLQTEHERYICEEIF 348

Query: 315 SKILSVNPG 323
            + + +   
Sbjct: 349 DRPVFITDY 357



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 50/139 (35%), Gaps = 26/139 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQYDLVCNGFEI 491
              +I D+P                 F M Q    E++   DL         LV    E+
Sbjct: 350 RPVFITDYP------------EKIKAFYMRQNEDKETVAAMDL---------LVPRIGEL 388

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G  R    +V+    +  G++ +  E          + G   H G   G +R++M + 
Sbjct: 389 IGGSQREERKDVLATRMAEFGLTVDDYE----WYLELREYGETVHSGFGIGFERLIMYVT 444

Query: 552 GAKNVREVSLFPMSQNFCD 570
           G +N+R+V  FP +    D
Sbjct: 445 GMENIRDVISFPRTPGNAD 463


>gi|226491502|ref|NP_078954.4| probable asparaginyl-tRNA synthetase, mitochondrial precursor [Homo
           sapiens]
 gi|296452944|sp|Q96I59|SYNM_HUMAN RecName: Full=Probable asparaginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS;
           Flags: Precursor
          Length = 477

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 112/258 (43%), Gaps = 19/258 (7%)

Query: 12  LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           LG  +  G  +++ GW+  VR    ++FL + D   +  +    DS     ++ +     
Sbjct: 34  LGAQNASGERIKIQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGL--DSRELNFGSS 91

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++   ++  N       +EL A+KI+++   +    P+  +  +P     +Y  
Sbjct: 92  VEVQGQLIKSPSKRQN-------VELKAEKIKVIGNCDAKDFPIKYKERHPLEYLRQYPH 144

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-----R 185
              R + L   +  R+    ++        F+   TPI+T++  EGA +          +
Sbjct: 145 FRCRTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLK 204

Query: 186 VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           V + +F+   A      Q    +M+  F + F   P FR E+ +S R   EFY ++ E+S
Sbjct: 205 VPEENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEIS 264

Query: 243 FVEQ-DDILNTMENVLRG 259
           FV+   D++  +E + + 
Sbjct: 265 FVDSLQDLMQVIEELFKA 282



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 27/157 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           AD R     E  ++        +++++P                PF M            
Sbjct: 345 ADLRTE--HEKYLVKHCGNIPVFVINYPL------------TLKPFYMRDNED------G 384

Query: 474 LLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                A   DL+  G  E+  GG+R      + +  +  G+++      +       + G
Sbjct: 385 PQHTVA-AVDLLVPGVGELFGGGLREERYHFLEERLARSGLTEV-----YQWYLDLRRFG 438

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             PHGG   G +R +  +LG  N+++V  FP   + C
Sbjct: 439 SVPHGGFGMGFERYLQCILGVDNIKDVIPFPRFPHSC 475


>gi|42560639|ref|NP_975090.1| asparaginyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|59798545|sp|Q6MUF2|SYN_MYCMS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|42492135|emb|CAE76732.1| asparagine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
          Length = 452

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 107/265 (40%), Gaps = 16/265 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +   V + G V   R    + F+ + D    T +     +  +E A   R   ++ + G 
Sbjct: 14  LDKEVEILGRVRSNRQGKFVSFMILNDGTTFTDLQVVYKTKGYEQALQARVSSIVKVVGR 73

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V+    +         + E+ A +IE++  A E       ++E+      +   L  +  
Sbjct: 74  VVLTPEKQ-------QKFEVQADEIELIDQAIEDYPLQ--KKEHTTEYLREIAHLRAKTK 124

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVN---QGSFY 192
           T +     R+    ++      +NF+   +PI+T++  EGA + FLV +R +   +  F+
Sbjct: 125 TFNAIFKIRSAAAYAIHRFFNEKNFVYIHSPIITSNDAEGAGEAFLVTTREDADYEKDFF 184

Query: 193 ALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               +     Q      A  F + +   P FR E+  + +   EF+ ++ E++F +  D 
Sbjct: 185 GKKASLTVSGQLHAEAFAQAFKKVYTFGPTFRAENSNTAKHAAEFWMIEPEVAFADLKDN 244

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNF 274
           +  ++++++ +       N     F
Sbjct: 245 IQLIQDMVKYIINYIFKHNRRELEF 269



 Score = 70.5 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 8/101 (7%)

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           +K ND     A   DL+  G  E+  G  R    E +++    V I  + +E        
Sbjct: 354 MKQNDDNKTVA-AVDLLVPGIGELVGGSQREDNYEKLIKRCKEVNIDIDQLEWY-----N 407

Query: 528 AFQ-CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +  G     G   G +R+VM + GA N+R+V  FP +  
Sbjct: 408 NLRLYGYYKSAGFGLGFERLVMYITGASNIRDVIPFPRTPK 448


>gi|302335189|ref|YP_003800396.1| asparaginyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319029|gb|ADK67516.1| asparaginyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 467

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 53/278 (19%), Positives = 98/278 (35%), Gaps = 29/278 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCID 74
           GS V ++GWV  +R      F+ + D      V         A ++   ++     L + 
Sbjct: 18  GSEVTVAGWVRSIRDMKNFGFVVLNDGSCFKDVQVVMNREKVANYDQVTTLTVGSALVVT 77

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G +                 EL A ++ I   A     P+  +R+  E +R +   L  R
Sbjct: 78  GTLALTPDR-------PQPFELQAAEVVIEGAARPDY-PMQKKRQSREFLRTQQ-HLRSR 128

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +        R+    ++        F+  +TPI+TAS  EGA +    + ++       
Sbjct: 129 TNLFRAVFRVRSVAAFAIHQFFQGRGFVYVNTPIITASDAEGAGEMFRVTTIDPANPPLT 188

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q +    A  F   +   P FR E+  + R   EF+ +
Sbjct: 189 EDGKVDYSRDFFGKATNLTVSGQLQGENFAMSFGDVYTFGPTFRAENSNTRRHAAEFWMV 248

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           + EM+F +    ++  E +L+ V     +      + L
Sbjct: 249 EPEMAFCDLAGEMDVSEEMLKYVITYVMDRCPDEIDML 286



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 51/149 (34%), Gaps = 24/149 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +     ++ D+P             A   F M Q        ND     A  
Sbjct: 342 HERYLTERHFRRPTFVTDYP------------AAIKAFYMRQ--------NDDGKTVAAA 381

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    +V+ +  + +G+       ++       + G   H G   
Sbjct: 382 DCLVPGIGEIIGGSQREERLDVLERRIAELGMDVG----QYKYYLDLRRYGSCRHAGFGL 437

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G +R+VM L G  N+R+V   P +    D
Sbjct: 438 GFERLVMYLTGVDNIRDVIPHPRTVGNAD 466


>gi|50539832|ref|NP_001002386.1| lysyl-tRNA synthetase [Danio rerio]
 gi|49900533|gb|AAH76028.1| Lysyl-tRNA synthetase [Danio rerio]
          Length = 602

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 68/330 (20%), Positives = 124/330 (37%), Gaps = 39/330 (11%)

Query: 23  LSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIA-----KSVRSEWVLCIDGL 76
           LSG VH  R  G  ++F D+R      QV+AN  +   E A       +R   ++ + G 
Sbjct: 141 LSGRVHAKRASGAKLLFYDLRGEGVKLQVMANSRNYTSEEAFVHINNKLRRGDIIGVRG- 199

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                          G++ +   ++ +LS      LP        +  RF+ R+LDL  +
Sbjct: 200 --------NPGKTKKGELSIIPVEMTLLSPCL-HMLPHLHFGLKDKETRFRQRYLDLILN 250

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYAL 194
              +     R++II  +R  +    F+E  TP++        A+ F+        + Y +
Sbjct: 251 DFVRQKFVTRSKIITYLRSFLDQLGFLEIETPMMNLIPGGAVAKPFITYHNDLNMNLY-M 309

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E
Sbjct: 310 RIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITE 368

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
            +L G+ +  +          ++ Y          + D   P    ++T+          
Sbjct: 369 KLLSGMVKHITGAY-------KVTYHPDGPEGQAYEIDFTPPFRRISMTQE--------- 412

Query: 315 SKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
              L    G +            R F D +
Sbjct: 413 ---LEKELGVKFPPPDTYDSDEMRKFLDDL 439



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 5/107 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQC 531
                +++L     EI +     +      + F     +K   ++           A + 
Sbjct: 493 KGLTERFELFVMKKEICNAYTELNDPIRQRELFEQQAKAKAEGDDEAMFIDETFCTALEY 552

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
           G+PP  G   GIDR+ M L  + N++EV LFP  +   D    +P+ 
Sbjct: 553 GLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKP-EDNKPAAPAE 598


>gi|39644781|gb|AAH07800.2| Asparaginyl-tRNA synthetase 2, mitochondrial (putative) [Homo
           sapiens]
 gi|119595469|gb|EAW75063.1| asparaginyl-tRNA synthetase 2 (mitochondrial)(putative), isoform
           CRA_c [Homo sapiens]
          Length = 477

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 112/258 (43%), Gaps = 19/258 (7%)

Query: 12  LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           LG  +  G  +++ GW+  VR    ++FL + D   +  +    DS     ++ +     
Sbjct: 34  LGAQNASGERIKIQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGL--DSRELTFGSS 91

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++   ++  N       +EL A+KI+++   +    P+  +  +P     +Y  
Sbjct: 92  VEVQGQLIKSPSKRQN-------VELKAEKIKVIGNCDAKDFPIKYKERHPLEYLRQYPH 144

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-----R 185
              R + L   +  R+    ++        F+   TPI+T++  EGA +          +
Sbjct: 145 FRCRTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLK 204

Query: 186 VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           V + +F+   A      Q    +M+  F + F   P FR E+ +S R   EFY ++ E+S
Sbjct: 205 VPEENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEIS 264

Query: 243 FVEQ-DDILNTMENVLRG 259
           FV+   D++  +E + + 
Sbjct: 265 FVDSLQDLMQVIEELFKA 282



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 27/157 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           AD R     E  ++        +++++P                PF M            
Sbjct: 345 ADLRTE--HEKYLVKHCGNIPVFVINYPL------------TLKPFYMRDNED------G 384

Query: 474 LLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                A   DL+  G  E+  GG+R      + +  +  G+++      +       + G
Sbjct: 385 PQHTVA-AVDLLVPGVGELFGGGLREERYHFLEERLARSGLTEV-----YQWYLDLRRFG 438

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             PHGG   G +R +  +LG  N+++V  FP   + C
Sbjct: 439 SVPHGGFGMGFERYLQCILGVDNIKDVIPFPRFPHSC 475


>gi|325510972|gb|ADZ22608.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 353

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 18/259 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
               +   V+L GWVH++R  G I F+ +RD  GI Q V +         K ++ E V+ 
Sbjct: 9   TEKKLEEVVKLQGWVHKLRKLGKIAFVLLRDRTGIIQCVVDAKKI---DVKELKLESVVE 65

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--PESIRFKYRF 130
           I+G+V              G+ E+    I+ LS A E       + +         + R 
Sbjct: 66  IEGIVKENE----------GRFEIQVNSIKTLSKALEKIPIEINKEDMELNIDTLIENRI 115

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L +R   ++      T I +     ++   F E  TP + +   EG  +       ++ +
Sbjct: 116 LSMRNSRVNSVFKIETEIAHGFSEFLVKNGFTEIYTPKIVSEGAEGGTELFKLKYFDKEA 175

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDI 249
           + A  Q+PQ YKQ+++A+G++R F+I   +R E   + R   E+  +D+EM F+ ++ D+
Sbjct: 176 YLA--QSPQFYKQMMVAAGYERVFEIGHVYRAESHDTKRHLNEYISMDLEMGFINDEMDL 233

Query: 250 LNTMENVLRGVFEEFSNGN 268
           +     +L+ +F+      
Sbjct: 234 IRFEIELLKYIFQNVRQKC 252


>gi|71899836|ref|ZP_00681986.1| Asparaginyl-tRNA synthetase, class IIb [Xylella fastidiosa Ann-1]
 gi|71730427|gb|EAO32508.1| Asparaginyl-tRNA synthetase, class IIb [Xylella fastidiosa Ann-1]
          Length = 466

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 67/389 (17%), Positives = 115/389 (29%), Gaps = 50/389 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G   VGS V + GWV   R    G+ F+ + D      +     +        VR     
Sbjct: 12  GKIQVGSEVTVRGWVRTRRDSKAGLSFVSVSDGSCFAAIQVVTPAHLPNYETEVRK---- 67

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +        +     Q E+ AQ IE++   E+        +++      +   L
Sbjct: 68  LTTGCAVIVIGTLALSLGQGQQFEIQAQSIEVVGWVEDPETYPIQPKQHSLEFLREVAHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--- 188
             R +        R  +  ++        +   +TPI+T S  EGA      S ++    
Sbjct: 128 RPRTNLFGAVARIRHCLSQAVHRFFHENGYYWITTPIITTSDAEGAGQMFRVSTLDLVNL 187

Query: 189 -----------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q      A    + +  +P FR E+  + R   EF
Sbjct: 188 PRTETGGIDFSHDFFGKETFLTVSGQLNVEAYALALSKVYTFSPTFRAENSHTPRHLAEF 247

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NN 273
           + ++ E++F +  +     E  L+ +F+                              + 
Sbjct: 248 WMIEPEIAFADLAEDARVAEQFLKFLFKTVLEERDDDLAFITERVEKTTISKLEGFINSP 307

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           F RI Y DAI+           P+   +   TEH         ++     P         
Sbjct: 308 FERIEYTDAIKLLERSGKKFDFPVEWGLDLQTEHERW-----LTEKHIGRPVVVTNYPEH 362

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
                 R   D     A     PG+  I 
Sbjct: 363 IKAFYMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 65/197 (32%), Gaps = 18/197 (9%)

Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSFAADA------RNHIAQELGIINCNCFEFCWIMDF 440
            +  L+ +D D  F          S           R      + ++  +  +F + +++
Sbjct: 274 FKTVLEERDDDLAFITERVEKTTISKLEGFINSPFERIEYTDAIKLLERSGKKFDFPVEW 333

Query: 441 PFYEWNEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKAFQYDLVCNGF-EIAS 493
                 E E+ +   H                  ++ ND     A   D++  G  EI  
Sbjct: 334 GLDLQTEHERWLTEKHIGRPVVVTNYPEHIKAFYMRLNDDGKTVA-AMDVLAPGIGEIIG 392

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  R    E++    +  G+        +       + G  PH G   G +R+V+ + G 
Sbjct: 393 GSQREERLEMLDIRMAQFGLDP----AHYQWYRDFRRYGSVPHAGFGLGFERLVVYVCGL 448

Query: 554 KNVREVSLFPMSQNFCD 570
            N+R+   +P +    +
Sbjct: 449 SNIRDAIPYPRAPGSAE 465


>gi|291569064|dbj|BAI91336.1| lysyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 325

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 97/242 (40%), Gaps = 7/242 (2%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R+ G +   R  G I F+ + D     Q+         +   +      L   G  +   
Sbjct: 66  RVCGRITFKRDSGSIGFIGLTDASATIQLKIEKKLVTGDPGLTFNQIKKLLDIGDFIGVG 125

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
                 N   G++ +   +++++S A  +P P          +  ++R +DL  + T  +
Sbjct: 126 GIGCRTN--RGELSIQVSRLDVISKA-TIPFPDSYYGINDPELCRRHREIDLVSNSTSLQ 182

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-GARDFLVPSRVNQGSFYALPQAPQ 199
               R+RII S+R  +    F E  TP+L +       R F+          Y L  A +
Sbjct: 183 RFKLRSRIIRSIRTYLWNAGFDEIETPVLQSIYGGVATRPFITHHNALDIDLY-LRIATE 241

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + +  +  G ++ F+I   FR+E   S   P EF  +++  ++ +   I+  +E+++  
Sbjct: 242 LFLKRAVCGGMEKVFEIGRVFRNEGIDSTHNP-EFTSIEVYQAYADYFQIMALVEDLICA 300

Query: 260 VF 261
           V 
Sbjct: 301 VA 302


>gi|161723224|ref|NP_350148.2| aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
          Length = 425

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 18/259 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
               +   V+L GWVH++R  G I F+ +RD  GI Q V +         K ++ E V+ 
Sbjct: 9   TEKKLEEVVKLQGWVHKLRKLGKIAFVLLRDRTGIIQCVVDAKKI---DVKELKLESVVE 65

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--PESIRFKYRF 130
           I+G+V              G+ E+    I+ LS A E       + +         + R 
Sbjct: 66  IEGIVKENE----------GRFEIQVNSIKTLSKALEKIPIEINKEDMELNIDTLIENRI 115

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L +R   ++      T I +     ++   F E  TP + +   EG  +       ++ +
Sbjct: 116 LSMRNSRVNSVFKIETEIAHGFSEFLVKNGFTEIYTPKIVSEGAEGGTELFKLKYFDKEA 175

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDI 249
           + A  Q+PQ YKQ+++A+G++R F+I   +R E   + R   E+  +D+EM F+ ++ D+
Sbjct: 176 YLA--QSPQFYKQMMVAAGYERVFEIGHVYRAESHDTKRHLNEYISMDLEMGFINDEMDL 233

Query: 250 LNTMENVLRGVFEEFSNGN 268
           +     +L+ +F+      
Sbjct: 234 IRFEIELLKYIFQNVRQKC 252



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 4/118 (3%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K +      T        +            +DL+  G EI +GG R +  +++ Q+  +
Sbjct: 309 KYNSDFVFLTHYSKDKRPMYTMPCGKNLTHSFDLIFRGMEITTGGQRINDYDMLRQSMLD 368

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G+        F      F+ GMPPHGG+A G++RI + LL   N+RE + F   +  
Sbjct: 369 KGLKV----ESFKSYLDVFKFGMPPHGGLAIGLERITIKLLNLDNIREAAFFVRDKKR 422


>gi|312863455|ref|ZP_07723693.1| asparagine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311100991|gb|EFQ59196.1| asparagine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 448

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 71/365 (19%), Positives = 131/365 (35%), Gaps = 47/365 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
              VG  + +  WV      G + FL +RD       V   P+          +  F+  
Sbjct: 12  PKHVGEEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKYGEEEGTEKFDTV 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + + G+V                 EL    +E++  + + P+     +E+  
Sbjct: 72  KRLSQETSVYVTGVVKEDERSKF-------GYELDVTAVEVIGESHDYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                 R L LR          R  II +         FI+  +PIL+ ++ E + +   
Sbjct: 122 DFLMDNRHLWLRSRKQMAVQQIRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                 G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S
Sbjct: 182 TDYF--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRY 286
           F+  D+ L+  E  ++ + +   +                   ++  F R+ YD+AI   
Sbjct: 239 FLSHDESLDLQEAYVKALIQGVIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEAIDLL 298

Query: 287 G-------TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
                   TD   L +     +  E ++ + F V + +++    ++ + +    G   R 
Sbjct: 299 QAHENDEDTDYEHLEHGDDFGSPHETWISNYFGVPTFVVNYPASFKAFYMKPVPGNPERV 358

Query: 340 FCDRM 344
            C  +
Sbjct: 359 LCADL 363



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ +   E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDDYDALVGKMDELGMDRSEYE----FYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|254427233|ref|ZP_05040940.1| lysyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196193402|gb|EDX88361.1| lysyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 504

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 61/294 (20%), Positives = 122/294 (41%), Gaps = 27/294 (9%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           +  +L   ++   V ++G +   R    +    ++D  G  Q+ A  D    ++ K  +S
Sbjct: 61  TKEELEEKNI--QVAVAGRMMLDRKAFKV----LQDMSGRIQIFAPKDET-RDVRKETKS 113

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             +  I G+               G + +   +  +L+ +   PLP   +       +++
Sbjct: 114 WDLGDIIGV------RGTLCKSGKGDLYVMMDEYLLLTKSLR-PLPEKHKGLTDTEAKYR 166

Query: 128 YRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R++DL  +   +     R +I+  +R  ++ ++F+E  TP+L        AR F+    
Sbjct: 167 QRYVDLIVNEDTRKAFQIRAKIVAGIRNFLVQKDFVEAETPMLQVIPGGATARPFITHHN 226

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  L+   ++ +
Sbjct: 227 SLDLDMY-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNP-EFTMLEFYQAYGD 284

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRYGTDK 290
             D++N  E++LR + E       V+           F R+   D+I  +  D 
Sbjct: 285 YHDLMNLTEDMLRTLAETVLGTTDVAYQGDVYDFGKPFTRMTVFDSILHFNPDM 338



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 58/153 (37%), Gaps = 6/153 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             IA  LGI   + +    +     +E   E  ++         P       +  D    
Sbjct: 350 REIATGLGIPLKDGYGLGKV-QIEIFEKTVE-HRLKDPTFITEYPTEVSPLARRMDDNPF 407

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGM 533
              +++    G EIA+G    + +E   + F      K   ++           A + G+
Sbjct: 408 VTERFEFFVGGREIANGFSELNDAEDQAERFRQQVEEKAAGDDEAMFYDEDYVVALEHGL 467

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP  G   GIDR+VML   A ++R+V LFP  +
Sbjct: 468 PPTAGEGIGIDRLVMLFTDAPSIRDVILFPHMR 500


>gi|309809859|ref|ZP_07703709.1| asparagine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308169811|gb|EFO71854.1| asparagine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 433

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 69/319 (21%), Positives = 118/319 (36%), Gaps = 34/319 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCI 73
           V   V++  W+   R  G I+FL  RD         +  N     FE AK++R E  L +
Sbjct: 15  VNQEVKMHVWLTDKRSSGKIMFLQFRDGTAFFQAVLLKKNVAEELFEQAKNLRQEASLYV 74

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +                 EL     ++++  +       G +E+       +R L L
Sbjct: 75  TGTINKDERSHF-------GYELQISDFQVVTNND---GYPIGNKEHGIDFLLDHRHLWL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R     ++        FI+   PIL  S+PEG  +       N  ++  
Sbjct: 125 RSKRPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEGTTELFHIEYFNSDAY-- 182

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y   + A  F + F   P FR E+ ++ R   EF+ ++ EM+++ QD+ L   
Sbjct: 183 LSQSGQLY-GEVGAHAFGKIFTFGPTFRAEESKTRRHLTEFWMMEPEMAWMHQDESLEIQ 241

Query: 254 ENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           E +L+ V +   +                      NF R+ YD+A++       D +   
Sbjct: 242 EGLLKFVTKRILDNCEYELSILGRDPEKLRPTTEGNFARLSYDEAVKMLQDAGRDFKWGD 301

Query: 298 IMH--NVTEHFVHSEFRVF 314
                +        +  VF
Sbjct: 302 DFGAPDEAFISEQYDRPVF 320



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 15/133 (11%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D P +  N        A  PF M +     L+      +    Y       EI  G  R 
Sbjct: 316 DRPVFILN-----YPTAIKPFYMKKNPENPLEYLCADVLAPEGY------GEIIGGSERE 364

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + +       G+  +  E          + G  PH G   G +R +  +    ++RE
Sbjct: 365 EDYDTLKAQIEEAGLDLKDYE----WYLDLRKYGSVPHSGFGIGFERFLGWICKLDHIRE 420

Query: 559 VSLFPMSQNFCDL 571
              FP   N  + 
Sbjct: 421 AIPFPRLINRLEP 433


>gi|305680501|ref|ZP_07403309.1| lysine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305660032|gb|EFM49531.1| lysine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 541

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 71/334 (21%), Positives = 137/334 (41%), Gaps = 21/334 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVM 78
            V ++G V  +R  G + F  I++  G          +  E+   + + W   +D G ++
Sbjct: 93  EVAIAGRVLFIRNTGKLCFATIQEGSGTQ---IQAMLSLAEVGPDLLAAWKSDVDLGDIV 149

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDT 137
           S     I +    G++ + A    + + A       F   +  E +R ++R+ DL  R+ 
Sbjct: 150 SVRGRVIVSK--RGELSVLASSWHMAAKALRPLPVAFA--DMSEDMRVRHRYTDLIMREK 205

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
             +N + R +++ ++R  + ++ F+E  TP+L        AR F+  S       Y L  
Sbjct: 206 ARENALTRIKVMRALRNYLESQGFLEVETPMLQTLHGGAAARPFVTHSNALDIDLY-LRI 264

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y +  +  G +R F++   FR+E   S   P EF  L+   ++   DD    ++N+
Sbjct: 265 APELYLKRCVVGGIERVFEVNRNFRNEGVDSSHSP-EFAMLETYQAWGTYDDCAELIKNL 323

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN--VTEHFVHSEFRVF 314
           ++ V  E     TV+     +         G + P +     ++     +     E  V 
Sbjct: 324 IQDVAMEVFGSTTVT-----LADGSEYDLGGAEWPTIEMYPSLNEALQRKFPGQPEVTVN 378

Query: 315 SKILSVNP--GYEVWAIPAKGGGGNRAFCDRMNE 346
           S +  +          +PAKGG G+    + + E
Sbjct: 379 STVAELREIADAVGLDVPAKGGWGHGKLVEELWE 412



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 70/200 (35%), Gaps = 14/200 (7%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI--INCNCFEFCW 436
           L       I +   + +     F     +   S  A+ R  IA  +G+       +    
Sbjct: 347 LGGAEWPTIEMYPSLNEALQRKFPGQPEVTVNSTVAELR-EIADAVGLDVPAKGGWGHGK 405

Query: 437 IMD--FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
           +++  +     ++ E  I   + P           + +        ++DL   GFE+A+G
Sbjct: 406 LVEELWELLCEDQLEGPIFVRNFP----VETSPLTRQHRSEPGVTEKWDLYVRGFELATG 461

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
                   +  + F +        +            A + GMPP  G   GIDR++M L
Sbjct: 462 YSELVDPVIQRERFEDQARLAAGGDEEAMVLDEDFLAAMEQGMPPTAGAGMGIDRLLMAL 521

Query: 551 LGAKNVREVSLFPMSQNFCD 570
            G   +RE  LFP+ +   D
Sbjct: 522 TGLG-IRETVLFPLVKPERD 540


>gi|12044965|ref|NP_072775.1| asparaginyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|255660134|ref|ZP_05405543.1| asparaginyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351167|sp|P47359|SYN_MYCGE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|3844702|gb|AAC71331.1| asparaginyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078636|gb|ABY79254.1| asparaginyl-tRNA synthetase [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 456

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 108/257 (42%), Gaps = 18/257 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLCI 73
              ++LSGWV   R    IIFL I D   I  + A      +   F + ++V     + +
Sbjct: 18  NKQIKLSGWVKNKRASANIIFLAISDGSSINTLQAVVKQEDNPQVFSLLQTVNLASAVMV 77

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++               +EL  +++ +L+ AE        ++E+ +        L +
Sbjct: 78  WGEIILTPK-------AKQPLELKLKQVSLLAQAESDYPLQ--KKEHSQEFFRSNAHLRV 128

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R  T    +  R+ + +++       +FI   +PILT++  EGA +  V    +  +F+ 
Sbjct: 129 RAKTYFAVMKIRSVLSHAIFEYFFKNDFILVQSPILTSNDCEGAGETFVIK--DSETFFN 186

Query: 194 L---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                    Q+     A  F + F   P FR E   ++R   EF+ ++ E++F    D++
Sbjct: 187 KTTFLTVSGQFGAEAFAQAFKKVFTFGPTFRAEKSHTNRHLSEFWMIEPEIAFANLKDLM 246

Query: 251 NTMENVLRGVFEEFSNG 267
             ++N+++ + ++    
Sbjct: 247 QLIQNLIKFLIKKVMEN 263


>gi|255720298|ref|XP_002556429.1| KLTH0H13024p [Lachancea thermotolerans]
 gi|238942395|emb|CAR30567.1| KLTH0H13024p [Lachancea thermotolerans]
          Length = 554

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 69/319 (21%), Positives = 120/319 (37%), Gaps = 29/319 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V   V++SGW+HR+R    ++F+ +RD  G  Q V   D A      ++  E  + + G 
Sbjct: 128 VDQRVKVSGWIHRLRSSKSLVFIVLRDGTGFLQAVLTGDLARAYQTTALTLESTVTLYGK 187

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--REYPESIRFKYRFLDLR 134
           V              G +EL     E++S+A         +       S+    R L LR
Sbjct: 188 VCKLPEG----KNAPGGVELLVDYYEVVSLAPSGEDAFTNKIAEGADPSLLLDQRHLALR 243

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +TL   +  R  ++ ++R     E   E +TP +  +  EG           + ++  L
Sbjct: 244 GETLSGVMKVRAALLRAVRRFYYEEGLTEVNTPCMVQTQVEGGSTLFNLGYYGEEAY--L 301

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL---- 250
            Q+ Q Y +  +AS     + I   FR E   + R   E+  ++ E+ F+  DD+L    
Sbjct: 302 TQSSQLYLETCLAS-LGDVYCIQESFRAEKSHTRRHLSEYTHIEAELCFLTFDDLLVHIE 360

Query: 251 NTMENVLRGVFEEFS----------NGNTVSNNFLRICYDDAIRRYGTDKP------DLR 294
             +   +R V E+                 +  F+R+ Y DAI+             D +
Sbjct: 361 KLITTAVRYVLEDPVAGPLVEQLNPGFKAPTMPFMRLDYRDAIKWLNEHGIKNEEGEDFK 420

Query: 295 NPIIMHNVTEHFVHSEFRV 313
               +    E  +     V
Sbjct: 421 FGDDIAEAAERKMTDTIGV 439



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   ++     +         L+ N  EI  G +R    + ++  F  
Sbjct: 445 RFPVEIKSFYMKRCADDANVTESVDV-------LMPNVGEITGGSMRIDAMDELMAGFKR 497

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI      + +       + G  PHGG   G +RI+  L     VR+ SL+P     C 
Sbjct: 498 EGI----ATDPYYWFIDQRKYGSCPHGGYGIGTERILAWLCDRFTVRDCSLYPRFTGRCK 553

Query: 571 L 571
            
Sbjct: 554 P 554


>gi|228477606|ref|ZP_04062239.1| asparaginyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250750|gb|EEK09948.1| asparaginyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 448

 Score =  170 bits (430), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 71/365 (19%), Positives = 131/365 (35%), Gaps = 47/365 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
              VG  + +  WV      G + FL +RD       V   P+          +  F+  
Sbjct: 12  PKHVGEEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKYGEEEGTEKFDTV 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + + G+V                 EL    +E++  + + P+     +E+  
Sbjct: 72  KRLSQETSVYVTGVVKEDERSKF-------GYELDVTAVEVIGESHDYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                 R L LR          R  II +         FI+  +PIL+ ++ E + +   
Sbjct: 122 DFLMDNRHLWLRSRKQMAVQQIRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                 G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S
Sbjct: 182 TDYF--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRY 286
           F+  D+ L+  E  ++ + +   +                   ++  F R+ YD+AI   
Sbjct: 239 FLSHDESLDLQEAYVKALIQGVIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEAIDLL 298

Query: 287 G-------TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
                   TD   L +     +  E ++ + F V + +++    ++ + +    G   R 
Sbjct: 299 QAHENDEDTDYEHLEHGDDFGSPHETWISNYFGVPTFVVNYPASFKAFYMKPVPGNPERV 358

Query: 340 FCDRM 344
            C  +
Sbjct: 359 LCADL 363



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ +   E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDDYDALVAKMDELGMDRSEYE----FYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|254566191|ref|XP_002490206.1| Cytoplasmic aspartyl-tRNA synthetase, homodimeric enzyme [Pichia
           pastoris GS115]
 gi|238030002|emb|CAY67925.1| Cytoplasmic aspartyl-tRNA synthetase, homodimeric enzyme [Pichia
           pastoris GS115]
 gi|328350604|emb|CCA37004.1| aspartyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 555

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 75/344 (21%), Positives = 129/344 (37%), Gaps = 24/344 (6%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPD-----SACFEIA 62
            G L  +D G  V     ++  R  G  ++FL +R    + Q V   +         + A
Sbjct: 96  IGSLTAADDGKEVVFRARIYNTRKQGTTMVFLSLRQRTELIQAVLKANGDSVSKQMVKWA 155

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--- 119
            ++  E ++ + G +        +A I   + E+   KI  +S   E    +  +     
Sbjct: 156 SAISLESIVTVHGTISKVVEPVKSATI--QEFEVLINKIYTISETPERLPLLVEDASRSD 213

Query: 120 ----------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                          R   R +DLR  T       ++ +    R  +  + F E  TP L
Sbjct: 214 AEAERSGLPIVNLDTRLDARVIDLRTITNQAIFTIQSGVCLLFREFLTKKKFTEVHTPKL 273

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             +  EG  +    +     +F A  Q+PQ YKQ L+A+ F+R F++AP FR E+  + R
Sbjct: 274 LGAPSEGGSNVFEVTYFKGKAFLA--QSPQLYKQQLIAADFERVFEVAPVFRAENSNTHR 331

Query: 230 LPGEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
              EF  LD+EM+F E  D +++ +  +   +F E           +R  Y     +   
Sbjct: 332 HMTEFTGLDLEMTFEEHYDEVIDLLSELFVFIFSELKTRYAKEIAIVRKQYPVEEFKLPK 391

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
           D   +R P             E   F  + + N  +    +  K
Sbjct: 392 DGKMVRIPFKEGIKLLRENGKEVDDFEDLSTENEKFLGKLVREK 435



 Score = 97.1 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 37/118 (31%), Positives = 46/118 (38%), Gaps = 10/118 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF             D     +  YD    G EI SG  R H SE + +  S 
Sbjct: 445 KFPLAVRPFYTMPD------HEDPR--YSNSYDFFMRGEEILSGAQRIHDSEFLKERMSV 496

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G+             +AF  G  PHGG   G++R+VM  L  KN+R  SLFP     
Sbjct: 497 HGLDSNS--PGLEDYVQAFDYGCAPHGGGGIGLERVVMFYLDLKNIRRASLFPRDPKR 552


>gi|255731872|ref|XP_002550860.1| asparaginyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240131869|gb|EER31428.1| asparaginyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 552

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 64/309 (20%), Positives = 116/309 (37%), Gaps = 26/309 (8%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            ++ + V + GWVHR+R   G+ F+ +RD  G  Q V   D A     + +  E  + I 
Sbjct: 124 ENLDTRVLVQGWVHRLRVQKGLAFITLRDGTGYLQCVLTGDLAKARQTQELTIESTVAIK 183

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFLD 132
           G++              G +EL A   EI+++A   +       +     ++    R L 
Sbjct: 184 GVISKLPEG----KTAPGGVELKADFYEIIALAPSGDDSFTNRIQEGADPNLLLDQRHLT 239

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR +TL   +  R     ++R     E   E + P +  +  EG           + ++ 
Sbjct: 240 LRGETLSAVMKVRAAYSAAIRRFYAEEGITEVTPPCMVQNQVEGGSTLFKLDYYGEEAY- 298

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  +       F I   FR E   + R   E+  ++ E+ F+   D+L+ 
Sbjct: 299 -LTQSSQLYLETCLP-ALGDVFCIQESFRAEKSHTRRHLSEYTHIEAELVFITFHDLLDH 356

Query: 253 MENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRR---YGTDKPDLRN 295
           +E +L    +                 N    +  F R+ Y +A+     +G    D   
Sbjct: 357 LERLLTKTIQYVLEDPVAGPIVKQLNPNFKAPTTPFKRMEYIEALDWLNEHGIPNEDGEK 416

Query: 296 PIIMHNVTE 304
                ++ E
Sbjct: 417 FKFGDDIAE 425



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R    + ++ A   
Sbjct: 443 RFPAEIKSFYMQRCQDDPRVTESVDV-------LMPNVGEITGGSMRIDKYDELVAAIKR 495

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G++     + +       + G  PHGG   G++R++  +L    VR+ SL+P     C 
Sbjct: 496 EGLNL----DSYYWFTDVRKYGGSPHGGYGIGLERMLAYMLDRFTVRDCSLYPRFSGRCK 551

Query: 571 L 571
            
Sbjct: 552 P 552


>gi|297171257|gb|ADI22264.1| lysyl-tRNA synthetase (class II) [uncultured Gemmatimonadales
           bacterium HF0200_36I24]
          Length = 514

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 67/368 (18%), Positives = 130/368 (35%), Gaps = 51/368 (13%)

Query: 5   RTH-SCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           R+H +C  + + D              V ++G +   R HG   F  I D  G  Q+   
Sbjct: 41  RSHLTCDAMALFDQNETEGSLDEDSIYVSVAGRLLSYRSHGKSAFGHIEDRSGQIQIYLK 100

Query: 54  PD---SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
            D      F +   +     + ++G +             TG+I +  ++  +L+ +   
Sbjct: 101 KDILGDDNFGVLDLLDLGDWIGVEGSL---------FRTRTGEITIQVKEWALLAKSLRP 151

Query: 111 PLPVFGERE------------YPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMI 157
                 E +              +  R++ R+ DL    ++ +    R +II  +R  + 
Sbjct: 152 LPLGKTEIDREKGDATTFSGLTDKEARYRQRYADLAVNPSVREVFRTRAKIIAELRSFLD 211

Query: 158 AENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216
              F+E  TP L        AR F+          Y L  A + Y + L+  G ++ ++I
Sbjct: 212 ELGFLEVETPALQPLYGGAAARPFVTKHNKLDRDLY-LRIADELYLKRLIVGGLEKVYEI 270

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
              FR+E       P EF  L+   +F++   +++  E +L  V    +    V      
Sbjct: 271 CKDFRNEGMDRFHNP-EFTMLEFYQAFIDYRGLMDLTEKMLSQVALVATGSTDVIYQGQE 329

Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
           I +    +         R P+ +  ++E        +   +  ++   E   IP   G G
Sbjct: 330 IDFAPPYQ---------RVPM-LDKLSEVMGLDVRGL--SVAELHDHAEKLNIPGLDGAG 377

Query: 337 NRAFCDRM 344
                D++
Sbjct: 378 WGKVVDKL 385



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 6/110 (5%)

Query: 459 FTMPQGGMESLKGNDLL--SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F M      S              +++L   G EI +     +      + F N    +E
Sbjct: 399 FVMDHPKDISPLAKSHRDKPDLTERFELFIAGEEICNAFSELNDPIDQRERFENQIKLRE 458

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             ++          RA + GMPP GG+  GIDR+ M+L    ++R+V LF
Sbjct: 459 AGDDETHPLDEDYIRALEYGMPPTGGLGMGIDRLTMILTDQVSIRDVILF 508


>gi|49619039|gb|AAT68104.1| lysyl-tRNA synthetase [Danio rerio]
          Length = 577

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 69/330 (20%), Positives = 125/330 (37%), Gaps = 39/330 (11%)

Query: 23  LSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIA-----KSVRSEWVLCIDGL 76
           LSG VH  R  G  ++F D+R      QV+AN  +   E A       +R   ++ + G 
Sbjct: 116 LSGRVHAKRASGAKLLFYDLRGEGVKLQVMANSRNYTSEEAFVHINNKLRRGDIIGVRG- 174

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                          G++ +   ++ +LS      LP        +  RF+ R+LDL  +
Sbjct: 175 --------NPGKTKKGELSIIPVEMTLLSPCL-HMLPHLHFGLKDKETRFRQRYLDLILN 225

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYAL 194
              +     R++II  +R  +    F+E  TP++        A+ F+        + Y +
Sbjct: 226 DFVRQKFVTRSKIITYLRSFLDQLGFLEIETPMMNLIPGGAVAKPFITYHNDLNMNLY-M 284

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E
Sbjct: 285 RIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITE 343

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
            +L G+ +  +          ++ Y          + D   P    ++T+          
Sbjct: 344 KLLSGMVKHITGAY-------KVTYHPDGPEGQAYEIDFTPPFRRISMTQE--------- 387

Query: 315 SKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
              L    G +         G  R F D +
Sbjct: 388 ---LEKELGVKFPPPDTYDSGEMRKFLDDL 414



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 4/95 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQC 531
                +++L     EI +     +      + F     +K   ++           A + 
Sbjct: 468 KGLTERFELFVMKKEICNAYTELNDPIRQRELFEQQAKAKAEGDDEAMFIDETFCAALEY 527

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 528 GLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMK 562


>gi|315224653|ref|ZP_07866476.1| asparagine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314945281|gb|EFS97307.1| asparagine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 476

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 56/275 (20%), Positives = 107/275 (38%), Gaps = 30/275 (10%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
            + L GWV   R +    F+ + D   I   QVV + ++   E+ K + +   + + G +
Sbjct: 17  EITLKGWVRTFRSNR---FIALNDGSTIDNLQVVVDFENTDPELLKRITTGAAIEVKGRL 73

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    +  N       +EL A  I IL  +     P+  ++   E +R +   L +R  T
Sbjct: 74  VESQGKGQN-------VELQASNISILGDSNPEEYPIQPKKHSLEFLR-ENAHLRVRSST 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---------- 187
               +  R+ +  ++        F   +TPI+T S  EGA +    + ++          
Sbjct: 126 FSAVMRVRSTLAFAIHKYFQDNGFFYVNTPIITGSDAEGAGEMFRVTTLDAKNPPLNENG 185

Query: 188 ----QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
               +  F+          Q +    A    + +   P FR E+  + R   EF+ ++ E
Sbjct: 186 EVDYKKDFFGRETNLTVSGQLEGETFAMALGKIYTFGPTFRAENSNTSRHLAEFWMIEPE 245

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           M+F +  D +N  E+ ++ V +           FL
Sbjct: 246 MAFYDLIDNMNLAEDFIKYVLQYTLEVRRDDLEFL 280



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 14/121 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M           D  +++A   D++  G  EI  G  R    +V+ Q  +
Sbjct: 368 DYPANIKAFYMR-------LNEDGKTVRAM--DILFPGIGEIVGGSQREERYDVLKQKIA 418

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           ++ + +  +           + G   H G   G +R+V+   G  N+R+V  +P +    
Sbjct: 419 DLHMDEATLW----WYLDLRKFGTAVHSGFGLGFERLVLFATGMANIRDVIPYPRTPQSA 474

Query: 570 D 570
           +
Sbjct: 475 E 475


>gi|168183293|ref|ZP_02617957.1| asparagine--tRNA ligase [Clostridium botulinum Bf]
 gi|237793933|ref|YP_002861485.1| asparaginyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182673549|gb|EDT85510.1| asparagine--tRNA ligase [Clostridium botulinum Bf]
 gi|229263698|gb|ACQ54731.1| asparagine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 463

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 74/432 (17%), Positives = 143/432 (33%), Gaps = 68/432 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWV 70
               +   V+++GWV  VR      F+++ D      V          F+    +     
Sbjct: 13  TEKHMDKEVKINGWVRTVRDSKNFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G+V                 E+ A ++ I   +     P+  +R   E +R     
Sbjct: 73  VEVEGIVQPTPN-------AKQPFEIKATRVSIEGKSSTDY-PLQKKRHTFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++        F+  +TPI+T S  EGA +    + ++   
Sbjct: 124 LRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDLNN 183

Query: 190 -------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+   A      Q      A  F   +   P FR E+  + R   E
Sbjct: 184 IPKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHASE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSN 272
           F+ ++ EM+F E  D L+  E++++ V                            N V++
Sbjct: 244 FWMIEPEMAFAELTDYLDNAEDMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDNVVNS 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           +F RI Y +A+             +   +   TEH  +   ++F K + V    +     
Sbjct: 304 DFKRITYTEAVELLQKSGAKFDYEVEWGIDLQTEHERYLTEQIFKKPVFVTDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR 390
                  +AF  R+N+  ++     L          G    +G   +   +   E     
Sbjct: 361 -------KAFYMRLNDDGKTVAAADLLV-------PGVGEIIGGSQREERLDVLEKRMEE 406

Query: 391 LDMQDGDSCFFI 402
           L++   D  +++
Sbjct: 407 LNLNKEDYWWYL 418



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 24/138 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P        K I      F M        + ND     A    LV    EI 
Sbjct: 349 KPVFVTDYP--------KDIKA----FYM--------RLNDDGKTVAAADLLVPGVGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+ +    + ++K      +       + G   H G   G +RI+M + G
Sbjct: 389 GGSQREERLDVLEKRMEELNLNK----EDYWWYLELRKYGETKHSGYGLGFERILMYITG 444

Query: 553 AKNVREVSLFPMSQNFCD 570
             N+R+V  FP +    +
Sbjct: 445 MTNIRDVIPFPRTPGSAE 462


>gi|73945459|ref|XP_857854.1| PREDICTED: similar to Asparaginyl-tRNA synthetase, cytoplasmic
           (Asparagine--tRNA ligase) (AsnRS) isoform 3 [Canis
           familiaris]
          Length = 559

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 68/348 (19%), Positives = 127/348 (36%), Gaps = 23/348 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
               G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + 
Sbjct: 132 EEYRGQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLSDDLCQCYNGVVLATESSVT 191

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G +              G  ELS    E++ +A           E    ++   R + 
Sbjct: 192 VYGTLNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMM 247

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R + + K +  R+   + +     +  F + + P L  +  EG           + +F 
Sbjct: 248 IRGENMSKILKARSVWPSQLAFVYSSSAFEQVTPPTLVQTQVEGGATLFKLDYFGEEAF- 306

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  +++LN 
Sbjct: 307 -LTQSSQLYLETCIP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFEELLNR 364

Query: 253 MENVLRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           +E+++  V +                N       F R+ Y DAI           +    
Sbjct: 365 LEDLVCDVVDRVLKSPAGSIVRDLNPNFKPPKRPFKRMNYSDAIVWLKEHNIKKEDG-TF 423

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           +   E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 424 YEFGEDIPEAPERLMTDSINEPILLCRFPVEIKSFYMQRCPEDSRLTE 471



 Score = 63.9 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +S     +         L+ N  EI  G +R   SE +L  +  
Sbjct: 450 RFPVEIKSFYMQRCPEDSRLTESVDV-------LMPNVGEIVGGSMRIWDSEEILAGYKR 502

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 503 EGIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCK 558

Query: 571 L 571
            
Sbjct: 559 P 559


>gi|282856149|ref|ZP_06265432.1| lysine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282585908|gb|EFB91193.1| lysine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 518

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 57/333 (17%), Positives = 124/333 (37%), Gaps = 23/333 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE-WVLCIDGLVMSR 80
            ++G +  +R  G   F++++D  G  Q+    D+   +     +       I G+V   
Sbjct: 66  SMAGRLMTLRRQGKAAFVNMQDETGTIQLYFRYDTLGEKDYTFFKKWLDSGDIIGIV--- 122

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ ++ ++  +L+ A   PLP          IR++ R+LDL  +   +
Sbjct: 123 ---GHPFRTQRGELTVAVERFRLLTKALR-PLPEKWHGLTDLEIRYRKRYLDLIVNPEAR 178

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAP 198
            + + R +II++ R  +     +E  TP+L+  +    AR F+       G+   L  A 
Sbjct: 179 EVFRKRAKIISTFRAVLEKHGTLEVETPVLSYLAGGANARPFITYHNAL-GANMYLRIAT 237

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+     R ++I+  FR+E       P EF  +++   + +  D++N  E ++R
Sbjct: 238 ELYLKRLVVGMMGRVYEISKDFRNEGMDLTHNP-EFTMMEVYWPYADYVDMMNLTEELIR 296

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
                       +N    I  +  +     D         M  + +     +F   +   
Sbjct: 297 E-------SCIAANGTPVIERNGVML----DFAKPFRRATMVELVKENCGVDFADITDEE 345

Query: 319 SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           + +   +            +     M  +   +
Sbjct: 346 ARDAARKNKIEITGHESRFKILTMFMEAFVEEK 378



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 6/114 (5%)

Query: 459 FTMPQG-GMESLKGNDLL-SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F M     +  L   D        +++L C G E+++G    +        F +    K 
Sbjct: 384 FVMGHPVEISPLSKKDPEHPDYTHRFELFCCGKELSNGYSELNDPIDQKNRFLDQTQKKT 443

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             E+           A + G+PP GG+  G+DR+VM L   +++R+V  FP  +
Sbjct: 444 EGEDETHPFDEDFVEALEQGLPPTGGLGIGMDRVVMFLTNCRSIRDVIFFPTMK 497


>gi|227890024|ref|ZP_04007829.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849468|gb|EEJ59554.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 432

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 75/306 (24%), Positives = 113/306 (36%), Gaps = 32/306 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      FE AKS+R E 
Sbjct: 10  SSKHVDQEVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVIRKNDVSEEVFEAAKSLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G V                 E+    +EI+S  E       G +E+        R
Sbjct: 70  SFYITGTVHEDKRSHF-------GYEIQISDLEIVSNNE---GYPIGNKEHGVDFLLDNR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +  +       E FI+   PI   S+PEG          N  
Sbjct: 120 HLWLRSKRPFAIMQIRNTMFKATIDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVDYFNND 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDL 293
           L+  E  L  + ++    N                    NF R+ YDDAI+       D+
Sbjct: 237 LDIQERYLAYMVKQVLENNEYELKILGRDPEKLRPTTEGNFTRLSYDDAIKMLQEAGRDI 296

Query: 294 RNPIIM 299
           +     
Sbjct: 297 KWGDDF 302



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 52/175 (29%), Gaps = 28/175 (16%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEE 449
           +G+       D +K    A         + G  +            +I+++P        
Sbjct: 274 EGNFTRLSYDDAIKMLQEAGR-DIKWGDDFGAPDEGYISEQFDRPVFIVNYP-------- 324

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                   PF M +      +      I    Y       EI  G  R    E++ Q   
Sbjct: 325 ----TTIKPFYMKKNPDNPKEYLCADVIAPEGY------GEIFGGSEREGNYEILKQQIE 374

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             G++ E  +          + G  PH G   G +R +  +    ++RE   FP 
Sbjct: 375 EAGLNLEDYQ----WYLDLRKFGGVPHSGFGMGFERTIAWICKLDHIREAIPFPR 425


>gi|309805636|ref|ZP_07699678.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165074|gb|EFO67315.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 433

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 69/319 (21%), Positives = 118/319 (36%), Gaps = 34/319 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCI 73
           V   V++  W+   R  G I+FL  RD         +  N     FE AK++R E  L +
Sbjct: 15  VDQEVKMHVWLTDKRSSGKIMFLQFRDGTAFFQAVLLKKNVSEELFEQAKNLRQEASLYV 74

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +                 EL     ++++  +       G +E+       +R L L
Sbjct: 75  TGTINKDERSHF-------GYELQISDFQVVTNND---GYPIGNKEHGIDFLLDHRHLWL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R     ++        FI+   PIL  S+PEG  +       N  ++  
Sbjct: 125 RSKRPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEGTTELFHIEYFNSDAY-- 182

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y   + A  F + F   P FR E+ ++ R   EF+ ++ EM+++ QD+ L   
Sbjct: 183 LSQSGQLY-GEVGAHAFGKIFTFGPTFRAEESKTRRHLTEFWMMEPEMAWMHQDESLEIQ 241

Query: 254 ENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           E +L+ V +   +                      NF R+ YD+A++       D +   
Sbjct: 242 EGLLKFVTKRILDNCEYELSILGRDHEKLRPTTEGNFARLSYDEAVKMLQDAGRDFKWGD 301

Query: 298 IMH--NVTEHFVHSEFRVF 314
                +        +  VF
Sbjct: 302 DFGAPDEAFISEQYDRPVF 320



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 15/133 (11%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D P +  N        A  PF M +     L+      +    Y       EI  G  R 
Sbjct: 316 DRPVFILN-----YPTAIKPFYMKKNPENPLEYLCADVLAPEGY------GEIIGGSERE 364

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + +       G+  +  E          + G  PH G   G +R +  +    ++RE
Sbjct: 365 EDYDTLKAQIEEAGLDLKDYE----WYLDLRKYGSVPHSGFGIGFERFLGWICKLDHIRE 420

Query: 559 VSLFPMSQNFCDL 571
              FP   N  + 
Sbjct: 421 AIPFPRLINRLEP 433


>gi|256819219|ref|YP_003140498.1| asparaginyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256580802|gb|ACU91937.1| asparaginyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 476

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 56/275 (20%), Positives = 107/275 (38%), Gaps = 30/275 (10%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
            + L GWV   R +    F+ + D   I   QVV + ++   E+ K + +   + + G +
Sbjct: 17  EITLKGWVRTFRSNR---FIALNDGSTIDNLQVVVDFENTDPELLKRITTGAAIEVKGRL 73

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    +  N       +EL A  I IL  +     P+  ++   E +R +   L +R  T
Sbjct: 74  VESQGKGQN-------VELQASNISILGDSNPEEYPIQPKKHSLEFLR-ENAHLRVRSST 125

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---------- 187
               +  R+ +  ++        F   +TPI+T S  EGA +    + ++          
Sbjct: 126 FSAVMRVRSTLAFAIHKYFQDNGFFYVNTPIITGSDAEGAGEMFRVTTLDAKNPPLNENG 185

Query: 188 ----QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
               +  F+          Q +    A    + +   P FR E+  + R   EF+ ++ E
Sbjct: 186 EVDYKKDFFGRETNLTVSGQLEGETFAMALGKIYTFGPTFRAENSNTSRHLAEFWMIEPE 245

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           M+F +  D +N  E+ ++ V +           FL
Sbjct: 246 MAFYDLIDNMNLAEDFIKYVLQYTLEVRRDDLEFL 280



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 14/121 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M           D  +++A   D++  G  EI  G  R    +V+ Q  +
Sbjct: 368 DYPANIKAFYMR-------LNEDGKTVRAM--DILFPGIGEIVGGSQREERYDVLKQKIA 418

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           ++ + +  +           + G   H G   G +R+V+   G  N+R+V  +P +    
Sbjct: 419 DLHMDEATLW----WYLDLRKFGTAVHSGFGLGFERLVLFATGMTNIRDVIPYPRTPQSA 474

Query: 570 D 570
           +
Sbjct: 475 E 475


>gi|212697091|ref|ZP_03305219.1| hypothetical protein ANHYDRO_01656 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675866|gb|EEB35473.1| hypothetical protein ANHYDRO_01656 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 462

 Score =  169 bits (429), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 63/356 (17%), Positives = 118/356 (33%), Gaps = 51/356 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVL 71
              +   +   GW+ + R    + F+++ D       QVV   D   FE  +       L
Sbjct: 11  EKYIDQEITAQGWIRQARFTKNVGFIELNDGTIFKNLQVVIGKDLENFESIQKEHLSASL 70

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G       + +  N      EL A K+E+L  ++E       ++            L
Sbjct: 71  KVIG-------KLVKTNNAKQAYELQANKVEVLGHSDENFPIQ--KQRQSLEYMRTIPHL 121

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
            +R +T       R+++  ++        FI  + P++TAS  EGA +    +  N    
Sbjct: 122 RVRTNTYRAVFRLRSKLAYALHKFFQEREFIYLNAPLITASDTEGAGEMFQVTTQNLEKP 181

Query: 190 ------------SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q +    A      +   P FR E+  + R   EF
Sbjct: 182 NLDKDGKVNYSKDFFGKKSYLTVSGQLEAEDYALALSNIYTFGPTFRAEESNTPRHAAEF 241

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + L+ E++F + +  ++  E +++ + E           F                    
Sbjct: 242 WMLEPELAFADYNVCMDVAEEMMKYMIEYVLENCKDEIEFFNERIDDTLIERLTKVKNAK 301

Query: 276 --RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
             RI Y DAI +      D   P+   +   TEH  +   ++    + V    +  
Sbjct: 302 FARITYTDAIEKLKNADVDFEYPVEWGIDLQTEHERYLSEKIVDGPVFVTDYPKDI 357



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 54/136 (39%), Gaps = 26/136 (19%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             ++ D+P        K I      F M        + ND  ++ A  +D++     E+ 
Sbjct: 347 PVFVTDYP--------KDIKA----FYMR-------RNNDGKTVAA--FDMLVPAVGELI 385

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + ++++  + G+  +  +          + G   H G   G +R VM L G
Sbjct: 386 GGSQREERYDELVKSMEDNGLKIDEYQ----NYLDLRKYGTVVHSGYGLGFERAVMYLTG 441

Query: 553 AKNVREVSLFPMSQNF 568
            KN+R+V  +P + N 
Sbjct: 442 MKNIRDVIPYPRTVNS 457


>gi|297624001|ref|YP_003705435.1| asparaginyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165181|gb|ADI14892.1| asparaginyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 436

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/295 (19%), Positives = 106/295 (35%), Gaps = 15/295 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWV 70
              +G  V L GWV   R  G I FL +RD  G  Q V    + D A F +A+ +  E  
Sbjct: 14  KHHIGETVTLEGWVAGSRSSGKIAFLRLRDGSGFVQGVIAKSDVDEATFALARKLTQESS 73

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G V +              +EL    + ++  A E P+              ++R 
Sbjct: 74  VRVTGAVRADER-------APSGVELGVTGLALVHEATEYPITPKAHG---VDFLMEHRH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R  ++ ++        F+    P+ T ++ EG  +        +  
Sbjct: 124 LYLRHPKPWAVMRIRDELVRAVHDFFAERGFLRFDAPVFTPNAAEGTTNLFEIDLFGEDK 183

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q+ Q Y     A    + +   P FR E  ++ +   EF+ ++ E++++E +  +
Sbjct: 184 AY-LSQSGQLY-AEAGALALGKVYTFGPTFRAEKSKTRKHLLEFWMVEPEVAYLEHEGNV 241

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
              E+ +  +              L             + P L     +  + EH
Sbjct: 242 KLQEDFVAYLVGRTLETRRTELEILERDVSRLEPSAQGNFPRLSYDEALAKLAEH 296



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 99/344 (28%), Gaps = 42/344 (12%)

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
             E   L +     +   ++   + ++R V + F+    +  +      + A        
Sbjct: 118 LMEHRHLYLRHP--KPWAVMRIRDELVRAVHDFFAERGFLRFDAPVFTPNAAEGTTNL-- 173

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
                 +   +        +    +  L++   Y             R     +  W   
Sbjct: 174 --FEIDLFGEDKAYLSQSGQLYAEAGALALGKVYTFGPTFRAEKSKTRKHL--LEFWMVE 229

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG-----D 405
              P +AY+    +  GNV        +L     E  R  L++ + D             
Sbjct: 230 ---PEVAYL----EHEGNVKLQEDFVAYLVGRTLETRRTELEILERDVSRLEPSAQGNFP 282

Query: 406 PLKFCSFAADARNH-----IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
            L +    A    H       ++LG  +       +  D P +      +        F 
Sbjct: 283 RLSYDEALAKLAEHGEKLPWGEDLGAPHETILGSLF--DRPVF-----IEAWPTQAKAFY 335

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
           M     +  +      I    Y       E+  G  R H  +++ +     G+       
Sbjct: 336 MQPYEDDPTRVKCSDLIAPDGY------GELIGGSERIHDYDLLKRRIEEHGLPL----E 385

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            F       + G  PH G   G +R +  + GA+++REV  FP 
Sbjct: 386 AFAWYLDLRRYGSVPHSGFGLGFERTLAWITGAQHLREVIPFPR 429


>gi|329117476|ref|ZP_08246193.1| asparagine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907881|gb|EGE54795.1| asparagine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 448

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 63/308 (20%), Positives = 108/308 (35%), Gaps = 24/308 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
              VG  + +  WV      G + FL +RD       V   P+          +A F+  
Sbjct: 12  KKHVGQEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKFGEEEGAAKFDTI 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + + G V                 EL    +E++  + + P+     +E+  
Sbjct: 72  KRLSQETSVYVTGTVKEDERSKF-------GYELDVTDLEVIGESVDYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                 R L LR       +  R  II S         FI+  +PIL+ ++ E + +   
Sbjct: 122 DFLMDNRHLWLRSRKQMAVMQVRNAIIYSTYEFFDQNGFIKFDSPILSGNAAEDSTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S
Sbjct: 182 TDYFGTPAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+  D+ L+  E  ++ + +        +   L    D   R        +     +  +
Sbjct: 239 FLNHDESLDLQEAYVKALIQGVIERAPHALEILERDIDALKRYITEPFKRVSYDDAISLL 298

Query: 303 TEHFVHSE 310
            EH    +
Sbjct: 299 QEHEADED 306



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNSERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    E ++     + + K   E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDDYEALVAKMDALEMDKSEYE----FYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|188524159|ref|ZP_02557488.2| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|198273287|ref|ZP_03205823.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|195659755|gb|EDX53135.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|198249807|gb|EDY74587.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
          Length = 493

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 77/356 (21%), Positives = 139/356 (39%), Gaps = 20/356 (5%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
             Y+  S  +L   D+   V L+G +  VR   GI    I+D     Q+  N  +   E+
Sbjct: 43  EEYKNFSKEELHNMDL-KKVTLAGRLIGVRQTFGI----IQDFSTKLQIYINKKNVDPEV 97

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             + +S  +  I         + +     + +I L+   I++++ + +  LP        
Sbjct: 98  FSTFKSLDIGDI------VELQGVAMKTNSDEITLNVTNIKLVAKSLK-VLPEKYHGLVD 150

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARD 179
           E I+ + R+LDL  +   KN  +KR+ II  MR  + ++ F E  TP+L    S   AR 
Sbjct: 151 EEIKARQRYLDLIVNDESKNTFIKRSLIIREMRNWLDSQGFFEVETPVLQDILSGAAARP 210

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+         +Y L  A +   +  +  GF++ ++I   FR+E   S   P EF  +++
Sbjct: 211 FITHHNTLDKQYY-LRIATEIALKKCIVGGFEKVYEIGRIFRNEGMDSTHNP-EFTSVEL 268

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            +++V+   I+   E+++R +  +    N     F     D           DL N  + 
Sbjct: 269 YVAYVDLWYIMQLTEDLIRHIATKLKLLNPTFRGF---SVDLNKPFKKAHMVDLINEHVG 325

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-DRMNEWARSQGQP 354
            N  E     +    +K   V                   F  +++ E     G P
Sbjct: 326 VNFFEVKSDEQALELAKKHHVKLLDHQKNFGHIVNAFFETFVEEKLIEPTFVYGHP 381



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 64/157 (40%), Gaps = 11/157 (7%)

Query: 418 NHIAQE--LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG-NDL 474
             +A++  + +++     F  I++  F+E   EEK I+         Q    + K   D 
Sbjct: 338 LELAKKHHVKLLDHQK-NFGHIVNA-FFETFVEEKLIEPTFVYGHPVQVSPLTKKNQEDP 395

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF----SNVGISKEVVENRFGGLYRAFQ 530
             +   +++L     E A+     +      + F        +  +           A +
Sbjct: 396 RFV--DRFELFICQKEFANAYSEINDPIDQYERFVAQLEEAKLGNDEANELDMEFIEALE 453

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            GMPP GG+  G+DR+VMLL    ++R V LFP  ++
Sbjct: 454 YGMPPTGGLGIGVDRLVMLLTSNDSIRNVLLFPHMKD 490


>gi|156083701|ref|XP_001609334.1| aspartyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796585|gb|EDO05766.1| aspartyl-tRNA synthetase, putative [Babesia bovis]
          Length = 557

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 71/321 (22%), Positives = 127/321 (39%), Gaps = 30/321 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-----PDSACFEIAK 63
             D+  ++ G  V L G ++ VR  G + F+ +R  +   Q + +           + A 
Sbjct: 127 IKDIDSAE-GQVVWLRGRINDVRGKGTMTFIILRQQHESLQCIVDSRQEMVSKDMAKWAA 185

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER----- 118
           S+  E ++ + G V+       +    T + EL   K+  +S A      +  +      
Sbjct: 186 SLSMESIVDVLGKVVRPEVPVTST---TAKCELQVHKLICISKANPTMPFLIRDANNTDD 242

Query: 119 ----------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                     +  +  R   R LDLR          ++ I    R  ++  +FIE  +P 
Sbjct: 243 EEACKNPSVIKVNQDTRLDNRPLDLRATLNLAIFKIQSEICQQFRNFLLKRDFIEIHSPK 302

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L   + EG  +       +  +   L Q+PQ YKQL +   F R F+I P FR E+  + 
Sbjct: 303 LLGGTSEGGCNVFKLKYFDNDA--CLAQSPQLYKQLAVVGDFRRVFEIGPVFRAENSNTH 360

Query: 229 RLPGEFYQLDMEMSFVE-QDDILNTMENVLRGVFEEF-SNGNTVSNNFLRICYDDAIRRY 286
           R   EF  LDMEM   +   ++++ ++++L+ VF    +   T    F +        ++
Sbjct: 361 RHLCEFVGLDMEMEIRDNYMEVVDLIDDMLKHVFHGINTECKTEVEIFQKHQPSVEPFKW 420

Query: 287 GTDKPDLRN--PIIMHNVTEH 305
               P +R    + M   TE 
Sbjct: 421 LDQTPRIRFTEAVEMLRGTEL 441



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 50/164 (30%), Gaps = 29/164 (17%)

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE--F 434
           K L+          ++M  G        D +    F+        + LG +    +   +
Sbjct: 419 KWLDQTPRIRFTEAVEMLRGTELAESIPDDISSYDFS----TEQEKRLGRLVKEKYNTDY 474

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
             + ++P                PF       + +            YD    G EI SG
Sbjct: 475 YIVYEYPL------------NARPFYTMPKERDGIMFT-------HSYDFFMRGEEILSG 515

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
             R H  +++LQ     GI  + +         AF+ G  PH G
Sbjct: 516 AQRIHNPDLLLQRAKECGIDPKTI----SCYIEAFKMGASPHAG 555


>gi|311030950|ref|ZP_07709040.1| lysyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 485

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 105/266 (39%), Gaps = 10/266 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR++G +  +R      F+ I D  G  Q++   D             + +   G  +  
Sbjct: 47  VRVAGRIMGIRQFSKFSFITISDIQGKLQLLLKKDEVGERAMSDFLDYFDI---GDFIGV 103

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLH 139
             +  +    T +  L  +   +L       LP           R++ R++DL       
Sbjct: 104 EGKMYSTK--TNEKTLRIENYVLLGKTL-HTLPDKWHGLTNTDTRYRQRYIDLMMTKETQ 160

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
             ++ RT+++ ++R  +  ++F+E  TP+L  +S    AR F             L  AP
Sbjct: 161 NRMLMRTKLVRAVRRFLEEKDFLEVETPVLQHTSSGALARPFKTYHNSLDMEL-NLRIAP 219

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  GF + F+ A CFR+E   S +   EF  ++   +F   +D +  M  ++ 
Sbjct: 220 ETYLKRLIVGGFTKVFEFAKCFRNEGI-SPQHLQEFTMVEGYAAFWNYEDTMQLMREMIV 278

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIR 284
            V ++  +   +S     I +     
Sbjct: 279 YVLKQTFDSTVISIQGQSIDFSLEWN 304



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 4/102 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGL 525
           + ND       ++ LV NG EI +            +      + K              
Sbjct: 384 RANDDNPSITDRFQLVVNGAEIINAYSELVDPVEQRKRLETQALLKSGGDTEAMEMDEDY 443

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             A + GMPP  G   GI+R++M+L     +++  LFP+++ 
Sbjct: 444 LLAMEHGMPPISGWGFGIERLLMVLTDCDTIKDCVLFPLTKK 485


>gi|17535927|ref|NP_495453.1| lysyl (K) tRNA Synthetase family member (krs-1) [Caenorhabditis
           elegans]
 gi|2501024|sp|Q22099|SYK_CAEEL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1086773|gb|AAA82396.1| Lysyl (k) trna synthetase protein 1, isoform a [Caenorhabditis
           elegans]
          Length = 572

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 10/264 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
               V   V ++G +H  R  G  ++F DI       Q++AN      ++   V     +
Sbjct: 97  KEQVVEEIVSVAGRIHSKRESGSKLVFYDIHGEGTHIQIMANAKFHTGDV-DFVTLHDRI 155

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
               +V      T       G++ L   +I  L+      LP        + +RF+ R+L
Sbjct: 156 KRGDIVGFTGRAT---RTKAGELSLIPNEILQLTPCL-HMLPHSHFGLKDKELRFRKRYL 211

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQG 189
           DL     +  N V R++II  +R  +    F+E  TPI+   +    A+ F+        
Sbjct: 212 DLILNPRVKDNFVIRSKIITFLRRYLDNLGFLEVETPIMNQIAGGATAKPFITHHNDLDM 271

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           + + L  AP+ Y ++L+  G DR +++   FR+E       P EF   +  M++ + +D+
Sbjct: 272 NLF-LRVAPELYHKMLVVGGIDRVYEVGRLFRNEGIDLTHNP-EFTTCEFYMAYADYEDV 329

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN 273
           +   E++L  +         +  +
Sbjct: 330 IQLTEDLLSSMVMSIKGTYKIEYH 353



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 4/95 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++L     EIA+     +      Q F      K+  ++           A + 
Sbjct: 460 PGLTERFELFAVTREIANAYTELNDPITQRQRFEQQAKDKDAGDDEAQMIDETFCNALEY 519

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP GG   GIDR+ M+L    N++EV LFP  +
Sbjct: 520 GLPPTGGWGMGIDRLSMILTDNNNIKEVLLFPAMR 554


>gi|302191306|ref|ZP_07267560.1| asparaginyl-tRNA synthetase [Lactobacillus iners AB-1]
          Length = 432

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 69/319 (21%), Positives = 118/319 (36%), Gaps = 34/319 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCI 73
           V   V++  W+   R  G I+FL  RD         +  N     FE AK++R E  L +
Sbjct: 14  VDQEVKMHVWLTDKRSSGKIMFLQFRDGTAFFQAVLLKKNVSEELFEQAKNLRQEASLYV 73

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +                 EL     ++++  +       G +E+       +R L L
Sbjct: 74  TGTINKDERSHF-------GYELQISDFQVVTNND---GYPIGNKEHGIDFLLDHRHLWL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R     ++        FI+   PIL  S+PEG  +       N  ++  
Sbjct: 124 RSKRPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEGTTELFHIEYFNSDAY-- 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y   + A  F + F   P FR E+ ++ R   EF+ ++ EM+++ QD+ L   
Sbjct: 182 LSQSGQLY-GEVGAHAFSKIFTFGPTFRAEESKTRRHLTEFWMMEPEMAWMHQDESLEIQ 240

Query: 254 ENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           E +L+ V +   +                      NF R+ YD+A++       D +   
Sbjct: 241 EGLLKFVTKRILDNCEYELSILGRDPEKLRPTTEGNFARLSYDEAVKMLQDAGRDFKWGD 300

Query: 298 IMH--NVTEHFVHSEFRVF 314
                +        +  VF
Sbjct: 301 DFGAPDEAFISEQYDRPVF 319



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 15/133 (11%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D P +  N        A  PF M +     L+      +    Y       EI  G  R 
Sbjct: 315 DRPVFILN-----YPTAIKPFYMKKNPENPLEYLCADVLAPEGY------GEIIGGSERE 363

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + +       G+  +  E          + G  PH G   G +R +  +    ++RE
Sbjct: 364 EDYDTLKAQIEEAGLDLKDYE----WYLDLRKYGSVPHSGFGIGFERFLGWICKLDHIRE 419

Query: 559 VSLFPMSQNFCDL 571
              FP   N  + 
Sbjct: 420 AIPFPRLINRLEP 432


>gi|148378598|ref|YP_001253139.1| asparaginyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           3502]
 gi|153932838|ref|YP_001382985.1| asparaginyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           19397]
 gi|153935177|ref|YP_001386531.1| asparaginyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|166231659|sp|A7FRK8|SYN_CLOB1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166231660|sp|A5HZE1|SYN_CLOBH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148288082|emb|CAL82150.1| asparaginyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           3502]
 gi|152928882|gb|ABS34382.1| asparaginyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           19397]
 gi|152931091|gb|ABS36590.1| asparagine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 463

 Score =  169 bits (429), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 75/432 (17%), Positives = 143/432 (33%), Gaps = 68/432 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWV 70
               +   V+++GWV  VR      F+++ D      V          F+    +     
Sbjct: 13  TEKHMDKEVKINGWVRTVRDSKNFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G+V                 E+ A +I I   +     P+  +R   E +R     
Sbjct: 73  VEVEGIVQPTPN-------AKQPFEIKATRISIEGKSSTDY-PLQKKRHTFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++        F+  +TPI+T S  EGA +    + ++   
Sbjct: 124 LRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDLNN 183

Query: 190 -------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+   A      Q      A  F   +   P FR E+  + R   E
Sbjct: 184 IPKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHASE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSN 272
           F+ ++ EM+F E  D L+  E++++ V                            N V++
Sbjct: 244 FWMIEPEMAFAELTDYLDNAEDMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDNVVNS 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           +F RI Y +A+             +   +   TEH  +   ++F K + V    +     
Sbjct: 304 DFKRITYTEAVELLQKSGVKFDYEVEWGIDLQTEHERYLTEQIFKKPVFVTDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR 390
                  +AF  R+N+  ++     L          G    +G   +   +   E     
Sbjct: 361 -------KAFYMRLNDDGKTVAAADLLV-------PGVGEIIGGSQREERLDVLEKRMEE 406

Query: 391 LDMQDGDSCFFI 402
           L++   D  +++
Sbjct: 407 LNLNKEDYWWYL 418



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 24/138 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P        K I      F M        + ND     A    LV    EI 
Sbjct: 349 KPVFVTDYP--------KDIKA----FYM--------RLNDDGKTVAAADLLVPGVGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+ +    + ++K      +       + G   H G   G +RI+M + G
Sbjct: 389 GGSQREERLDVLEKRMEELNLNK----EDYWWYLELRKYGETKHSGYGLGFERILMYITG 444

Query: 553 AKNVREVSLFPMSQNFCD 570
             N+R+V  FP +    +
Sbjct: 445 MTNIRDVIPFPRTPGSAE 462


>gi|285018513|ref|YP_003376224.1| asparaginyl-tRNA synthetase (asnrs) protein [Xanthomonas
           albilineans GPE PC73]
 gi|283473731|emb|CBA16234.1| probable asparaginyl-trna synthetase (asnrs) protein [Xanthomonas
           albilineans]
          Length = 466

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 112/385 (29%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VG  V + GWV   R    G+ F+++ D      +     +A       V+        G
Sbjct: 16  VGGEVTVRGWVRTRRDSKAGLSFVNVSDGSCFAPIQVVAPAALPNYEPEVKR----LTAG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +      + +       E+ A+ IE+L   E+        + +          L  R 
Sbjct: 72  CAVIARGHLVASQGQGQSFEIQAESIEVLGWVEDPETYPIQPKAHSLEFLRDVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           +        R  +  ++        +   STPI+T S  EGA      S ++        
Sbjct: 132 NLFGAVTRIRNCLAQAVHRYFHQNGYHWISTPIITTSDAEGAGQMFRVSTLDLTNLPRDG 191

Query: 190 --------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q           + +   P FR E+  + R   EF+ ++
Sbjct: 192 KGQVDFSRDFFGKETFLTVSGQLNVEAYCLALSKVYTFGPTFRAENSHTTRHLAEFWMIE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNFLRI 277
            E++F +  +     E+ L+ +F                             V++ F RI
Sbjct: 252 PEIAFADLAEDARVAEDFLKSLFRAVLEERGDDLAFLAERVDKTAISKLESFVNSPFERI 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y DAI            P+   +   TEH         ++     P             
Sbjct: 312 EYTDAIGLLQRSGQTFEFPVEWGLDLQTEHERW-----LTEQHVGRPVVVTNYPEHIKAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 58/161 (36%), Gaps = 12/161 (7%)

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES---LK 470
           R      +G++  +   F + +++      E E+ +   H                  ++
Sbjct: 310 RIEYTDAIGLLQRSGQTFEFPVEWGLDLQTEHERWLTEQHVGRPVVVTNYPEHIKAFYMR 369

Query: 471 GNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
            ND     A   D++  G  EI  G  R    +V+ +     G+        +G      
Sbjct: 370 LNDDGKTVA-AMDVLAPGIGEIIGGSQREERLDVLDRRMLQFGLDP----QHYGWYRDFR 424

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           + G  PH G   G +R+V+ + G  N+R+   +P +    +
Sbjct: 425 RYGTVPHAGFGLGFERLVVYVCGLSNIRDAIPYPRAPGSAE 465


>gi|302870294|ref|YP_003838931.1| lysyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302573153|gb|ADL49355.1| lysyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 502

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 62/283 (21%), Positives = 114/283 (40%), Gaps = 20/283 (7%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD 55
           RT +   L          +  G  V ++G V  +R  G + F  +RD  G   Q + + D
Sbjct: 43  RTTTLAQLRERYGDLPTDTATGDRVSVTGRVIFIRNTGKLCFATLRDGDGTEVQAMLSLD 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                 A+ +     L   G  +  + E I +    G++ + A++  + + A        
Sbjct: 103 RVG---AERLGDWKRLVDLGDHVGVTGEVITSR--RGELSVLAEEWAVTAKALRPLP--V 155

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +   E  R + R++DL      + +V+ R   + S+R  +  ++FIE  TP+L     
Sbjct: 156 AHKPLSEESRVRQRYVDLVVRPQARQMVRTRATAVRSLRDTLHGQDFIEVETPMLQLLHG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  G DR F+I   FR+E   S   P E
Sbjct: 216 GAAARPFVTHSNALDTDLY-LRIAPELFLKRAVVGGVDRVFEINRNFRNEGIDSSHSP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           F  L+   ++ +   +     N+++      +    V++   R
Sbjct: 274 FAMLEAYQAYGDYHTMAELTRNLVQQAAVAVAGSTVVTHADGR 316



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 28/151 (18%)

Query: 419 HIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +A+EL   ++  +     ++MD+P     EE   +  AH                    
Sbjct: 369 KLAEELFEELVVPSLRAPTFVMDYP-----EETSPLTRAHR----------------SEP 407

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
             A ++DL   GFE+ +         V  +            ++          RA + G
Sbjct: 408 GLAEKWDLYVLGFELGTAYSELVDPVVQRERLVAQAQLAARGDDEAMRLDEDFLRAMEYG 467

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP GG+  GIDR++M L G   +RE  LFP
Sbjct: 468 MPPSGGMGMGIDRLLMALAGLG-IRETILFP 497


>gi|2664210|emb|CAA10904.1| asparaginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 566

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 54/292 (18%), Positives = 101/292 (34%), Gaps = 32/292 (10%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
            D G+S VG  + + GWV  +R    + F++I D   ++ +     S   E    V S  
Sbjct: 100 ADEGLSRVGQSLNIMGWVRTLRSQSSVTFIEINDGSCLSNLQCVMTSDA-EGYDQVESGS 158

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           +L   G  +S     + +     ++EL  +KI ++   +        ++           
Sbjct: 159 IL--TGASVSVQGTIVASQGTKQKVELKVEKIIVVGECDSSYPIQ--KKRVSREFLRTKA 214

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ- 188
            L  R +T       R  +  +         F+  ++PI+TAS  EGA +    + +   
Sbjct: 215 HLRPRTNTFGAVARVRNTLAYATHKFFQESGFVWVASPIITASDCEGAGEQFCVTTLIPS 274

Query: 189 -----------------------GSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRD 222
                                    F+  P       Q      A+     +   P FR 
Sbjct: 275 SHEYTDTSIDAIPKTKGGLIDWSQDFFGKPAFLTVSGQLNGETYATALSDVYTFGPTFRA 334

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           E+  + R   EF+ ++ E++F + DD +      L+ V +   +       F
Sbjct: 335 ENSNTSRHLAEFWMIEPELAFADLDDDMACATAYLQYVVKYVLDNCKEDMEF 386



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 4/102 (3%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    LV    E+  G  R    EV+      + ++K      +      
Sbjct: 468 MRENDDGKTVAAMDMLVPRIGELIGGSQREERLEVLEARLDELKLNK----ESYWWYLDL 523

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            + G  PH G   G +R+V  + G  N+R+V  FP +    +
Sbjct: 524 RRYGSVPHAGFGLGFERLVQFVTGIDNIRDVIPFPRTPASAE 565


>gi|15922404|ref|NP_378073.1| lysyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|15623193|dbj|BAB67182.1| 444aa long hypothetical lysyl-tRNA synthetase [Sulfolobus tokodaii
           str. 7]
          Length = 444

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 70/333 (21%), Positives = 138/333 (41%), Gaps = 27/333 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +  +G V  +R HG I F+DI D     Q+    +    E+ +     + +   G ++  
Sbjct: 4   ISTAGRVANIRRHGKISFVDIFDEGEKLQLQLRVN----ELGEKYDKFFEIVDRGDIIGV 59

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139
             + +    I G++ L  +   +L+ +     P    +  PE  R+ +R++D L  D   
Sbjct: 60  KGDLLYT--IKGELTLRIKDYTMLAKSL--IEPPDWSKLSPE-FRYAHRYVDFLYNDNAR 114

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
           K +  R  II  +R  + ++ FIE  TPIL        A+ F       +  +Y L  + 
Sbjct: 115 KAMEIRFLIIRLIREYLYSKGFIEVETPILQPVYGGALAKPFKSHVNYLEEDWY-LRISL 173

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y +  +  GF++ F+I   FR+ED      P EF  +++  ++ + +DI+   E++L+
Sbjct: 174 ELYLKRFIVGGFNKVFEIGKVFRNEDIDVTHNP-EFTLMELYWAYADYNDIMRLTEDMLQ 232

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
            V +   +         +I Y  + + Y  D    +   I   ++E    +   V  + L
Sbjct: 233 YVVKSIFHDT-------KIKYTISGKDYEIDFSQFKKVTIYDALSEALGKNVENVSDEEL 285

Query: 319 SVNPGYEVWAIPAKGGGGNR-----AFCDRMNE 346
                 + + +  +G    R        D++ E
Sbjct: 286 --KNLMDKYGLKPRGNMYIRGLMIEKLFDKLVE 316



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 70/205 (34%), Gaps = 42/205 (20%)

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL- 424
                 +G   ++++    + +  +  ++   + +                R  + ++L 
Sbjct: 267 DALSEALGKNVENVSDEELKNLMDKYGLKPRGNMYI---------------RGLMIEKLF 311

Query: 425 -GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             ++  N  +  +I+D+P      E   +   H                        +++
Sbjct: 312 DKLVEPNLIQPTFILDYPI-----ETTPLCKPHR----------------SKPGLVERFE 350

Query: 484 LVCNGFEIASGGIRNHMSEVM----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           L   G E+A+     +   +      Q         E          RA   GMPP GG+
Sbjct: 351 LFIAGMELANAYTELNDPILQDKLFKQEQEMFRRGDEEAHPYDVDFVRALSYGMPPTGGL 410

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPM 564
             GIDR+VMLL    +++EV  FPM
Sbjct: 411 GIGIDRLVMLLTNNYSIKEVIPFPM 435


>gi|320536685|ref|ZP_08036697.1| asparaginyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320146467|gb|EFW38071.1| asparaginyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 473

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 69/386 (17%), Positives = 122/386 (31%), Gaps = 66/386 (17%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA---CFEIAKSVRSE 68
           L +   G  + + GWV   R    +IFL + D      +    D       E    ++  
Sbjct: 9   LTLEPDGREIAVYGWVRTKRETKNLIFLQVNDGSCFGSIQITFDRERGISAETEAELKRI 68

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
                 G  +    + + +       E+ A+ I +   A     P+  +    E +R + 
Sbjct: 69  S----TGASVCAKGKLVPSPASGQAAEVQAESILVFGEAPVDSYPLQKKNHSLEFLR-EI 123

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN- 187
             L  R +T       R ++  ++        F    TPI+T S  EGA +    + +N 
Sbjct: 124 AHLRARTNTFGAVARMRNQMSFAVHSFFQEHGFQYVHTPIITGSDCEGAGEMFHVTTLNI 183

Query: 188 ---------------------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
                                   F+   A      Q +    A+   R +   P FR E
Sbjct: 184 QEIVQKALKEKTNPETFAVDYTQDFFGKEANLTVSGQLELETYATALSRVYTFGPTFRAE 243

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS------------ 271
           +  + R   EF+ ++ EMSF   +  ++  E  +  + +                     
Sbjct: 244 NSNTTRHLSEFWMIEPEMSFFHLEQTMDMAEQFVVHLLKWALEKCREDLAFFDSRIKNGL 303

Query: 272 ---------NNFLRICYDDAIRRYGTDKPDLRN-PIIMHNV-TEHFVHSEFRVFSKILSV 320
                      F RI Y +A+     +K      P    ++ TEH  +    VF   + V
Sbjct: 304 IDMLTKVVTTPFTRITYTEAVALLEKNKSAFEFTPYWGCDLQTEHERYLTETVFKGPVIV 363

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNE 346
               +            +AF  +MNE
Sbjct: 364 TDYPKEI----------KAFYMKMNE 379



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 24/137 (17%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
              + D+P     +E K        F M           D  +++A    LV    EI  
Sbjct: 360 PVIVTDYP-----KEIK-------AFYMKMNE-------DGKTVRAMDV-LVPYLGEIIG 399

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  R      + +  + +G+     +  +       + G  PH G   G DR+++ + G 
Sbjct: 400 GSEREDNYAALEKRINELGL----AKENYWWYLDLRKYGTVPHSGFGLGFDRLLLYVTGM 455

Query: 554 KNVREVSLFPMSQNFCD 570
            N+R+V  FP +    D
Sbjct: 456 GNIRDVIPFPRAAKLAD 472


>gi|260822036|ref|XP_002606409.1| hypothetical protein BRAFLDRAFT_118529 [Branchiostoma floridae]
 gi|229291750|gb|EEN62419.1| hypothetical protein BRAFLDRAFT_118529 [Branchiostoma floridae]
          Length = 478

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/340 (18%), Positives = 123/340 (36%), Gaps = 17/340 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            ++  S V++  W HR+R  G  ++F+ +RD  G  Q V N        A  + +E  +C
Sbjct: 131 TANRNSRVKVKAWCHRIRRQGKNLMFIVLRDGTGFLQCVLNDTLCHTYNALVLSTESTVC 190

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G++    A         G  EL A   E++ +A           E    ++   R + 
Sbjct: 191 IYGVIKEVPAGQQ----APGGHELHADYWELIGLAPPGGADNLINEESHVDVQLDNRHMM 246

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R + + K +  R+ ++   R       + E + P L  +  EG           + ++ 
Sbjct: 247 IRGENMSKVMKMRSVVMQCFREHYFNRGYCEVTPPTLVQTQVEGGSTLFTLDYFGEQAY- 305

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  + S     F IA  +R E  R+ R   E+  ++ E  F+  DD+   
Sbjct: 306 -LTQSSQLYLETCLPS-MGDVFCIAESYRAELSRTRRHLAEYTHIEAECPFISFDDLF-L 362

Query: 253 MENVLRGVFEE--FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
                  +  E  F + + +     R  + +A      + P +    ++  V +    + 
Sbjct: 363 SNPRYTHIEAECPFISFDDLVPLTPRYTHIEA------ECPFISFDDLLSRVEDLVCDTV 416

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
            RV +               A      R       ++ + 
Sbjct: 417 DRVINSPFGNLLKEVNPDFQAPKRPFKRMNYADAIKYLKE 456


>gi|90961666|ref|YP_535582.1| asparaginyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227890754|ref|ZP_04008559.1| asparaginyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|301300794|ref|ZP_07206978.1| asparagine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|123269944|sp|Q1WU36|SYN_LACS1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|90820860|gb|ABD99499.1| Asparaginyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227867163|gb|EEJ74584.1| asparaginyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|300851644|gb|EFK79344.1| asparagine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 433

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 71/336 (21%), Positives = 123/336 (36%), Gaps = 38/336 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE---IAKSVRSEWV 70
              V   V++  W+   R  G I FL +RD     Q V   ++   E   +AK V+ E  
Sbjct: 10  KHHVNEKVKIGVWLTNKRSSGKIAFLQLRDGSAYFQGVVVKNAVSEETFALAKEVKQETS 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G++           I   +IE+  +                  +E+       +R 
Sbjct: 70  LYVTGVIHEDKRSHFGYEIEIEEIEVVGES----------NEYPITPKEHGTDFLMDHRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R  +I +       E FI+   PILT S+PEG  +       ++ +
Sbjct: 120 LWLRSKKQFAIMQIRNEMIRATYEFFNKEGFIKLDAPILTGSAPEGTTELFHTEYFDRDA 179

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y +   A  + + F   P FR E  ++ R   EF+ ++ EM+F+ Q++ L
Sbjct: 180 Y--LSQSGQLY-EEAGAMAYGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFMHQEESL 236

Query: 251 NTMENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTD--KPD 292
              E  +  + +   +                       + RI YD+AI         PD
Sbjct: 237 EIQERYVAYLVQSVLDNCQYPLQILGRDTEVLKRYTELPYPRISYDEAIELLQQSGKFPD 296

Query: 293 LRNPIIMHNVTE----HFVHSEFRVFSKILSVNPGY 324
           ++      +  E            V +   ++ P Y
Sbjct: 297 VKWGEDFGSPEETYLAEHFSKPVFVMNYPKAIKPFY 332



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 46/137 (33%), Gaps = 16/137 (11%)

Query: 440 FPFYEWNEE----EKKIDFAHN---PFTMPQGGMES---LKGNDLLSIKAFQYDLVCN-- 487
           FP  +W E+    E+     H     F M          +K +          D++    
Sbjct: 294 FPDVKWGEDFGSPEETYLAEHFSKPVFVMNYPKAIKPFYMKPHPTRDDVVICADMLAPEG 353

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             EI  G  R    + + +     G+  +  E          + G  PH G   G++R V
Sbjct: 354 YGEIIGGSERATDPKYLEEQIIKAGLDVKDYE----WYLDLRRYGSVPHSGFGLGLERAV 409

Query: 548 MLLLGAKNVREVSLFPM 564
             + G  ++RE   FP 
Sbjct: 410 TWITGEDHIREAIPFPR 426


>gi|94500762|ref|ZP_01307291.1| lysyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94427084|gb|EAT12065.1| lysyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 513

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 62/307 (20%), Positives = 119/307 (38%), Gaps = 36/307 (11%)

Query: 10  GDLGVSDV---GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK-SV 65
           G+    ++    + V ++G +   R      F  I D  G  Q     D       K   
Sbjct: 49  GEFSKEELEAQDNQVAVAGRIMFQRGP----FTKINDASGGIQFYVPKDVQKEINYKSKF 104

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
               ++   G +       +  N+ T      A  + +L+ +   PLP        + I+
Sbjct: 105 DLGDIVGARGALHKSGKGELYVNVAT------ADDLIMLTKSLR-PLPDKFHGLADQEIK 157

Query: 126 FKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           ++ R++DL  +   ++  + R++II +MR  +   NF+E  TP+L A             
Sbjct: 158 YRQRYVDLIINQETRDLFMVRSKIIEAMRKYLSDRNFMEVETPMLQAIPGGATAKPFETH 217

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
               G    L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++   ++ 
Sbjct: 218 HNALGIDMYLRIAPELYLKRLLVGGFERVFEINRNFRNEGLSTRHNP-EFTMIEFYQAYA 276

Query: 245 EQDDILNTMENVLRGVFEEFSNGN-------------------TVSNNFLRICYDDAIRR 285
              D+++T E++LR + ++                          +  F R+   +A+ +
Sbjct: 277 TYHDLMDTTEDMLRNIAQDVLGTTDIVSTEKDAEGNVVNETVYDFAKPFARLTMMEAVLK 336

Query: 286 YGTDKPD 292
           Y  D  +
Sbjct: 337 YNPDFDE 343



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 5/128 (3%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E    E K+D        P       + ND       +++    G E+A+G    + +E
Sbjct: 384 FE-ETAEHKLDQPTFITAYPWEVSPLARRNDENPFITDRFEFFVGGRELANGFSELNDAE 442

Query: 503 VMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + F      K+  ++          +A + GMPP  G   GIDR+VML   +  +++
Sbjct: 443 DQAERFRKQVEEKDAGDDEAMHYDADYVQALEYGMPPAAGEGIGIDRLVMLFTDSPTIKD 502

Query: 559 VSLFPMSQ 566
           V LFP  +
Sbjct: 503 VILFPHMR 510


>gi|171920720|ref|ZP_02695465.2| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|185178848|ref|ZP_02554646.2| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188024429|ref|ZP_02570729.2| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188518484|ref|ZP_03003968.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|195867438|ref|ZP_03079442.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|209554339|ref|YP_002284482.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225550679|ref|ZP_03771628.1| lysine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551351|ref|ZP_03772297.1| lysine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|226710931|sp|B5ZAP2|SYK_UREU1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|171903464|gb|EDT49753.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|184209484|gb|EDU06527.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018717|gb|EDU56757.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188998068|gb|EDU67165.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|195660914|gb|EDX54167.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|209541840|gb|ACI60069.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225379166|gb|EEH01531.1| lysine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225379833|gb|EEH02195.1| lysine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 493

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 76/356 (21%), Positives = 139/356 (39%), Gaps = 20/356 (5%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
             Y+  S  +L   D+   V L+G +  VR   GI    I+D     Q+  +  +   E+
Sbjct: 43  EEYKNFSKEELHNMDL-KKVTLAGRLIGVRQTFGI----IQDFSTKLQIYIDKKNVDPEV 97

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             + +S  +  I         + +     + +I L+   I++++ + +  LP        
Sbjct: 98  FSTFKSLDIGDI------VELQGVAMKTNSDEITLNVTNIKLVAKSLK-VLPEKYHGLVD 150

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARD 179
           E I+ + R+LDL  +   KN  +KR+ II  MR  + ++ F E  TP+L    S   AR 
Sbjct: 151 EEIKARQRYLDLIVNDESKNTFIKRSLIIREMRNWLDSQGFFEVETPVLQDILSGAAARP 210

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+         +Y L  A +   +  +  GF++ ++I   FR+E   S   P EF  +++
Sbjct: 211 FITHHNTLDKQYY-LRIATEIALKKCIVGGFEKVYEIGRIFRNEGMDSTHNP-EFTSVEL 268

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            +++V+   I+   E+++R +  +    N     F     D           DL N  + 
Sbjct: 269 YVAYVDLWYIMQLTEDLIRHIATKLKLLNPTFRGF---SVDLNKPFKKAHMVDLINEHVG 325

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-DRMNEWARSQGQP 354
            N  E     +    +K   V                   F  +++ E     G P
Sbjct: 326 VNFFEVKSDEQALELAKKHHVKLLDHQKNFGHIVNAFFETFVEEKLIEPTFVYGHP 381



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 64/157 (40%), Gaps = 11/157 (7%)

Query: 418 NHIAQE--LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG-NDL 474
             +A++  + +++     F  I++  F+E   EEK I+         Q    + K   D 
Sbjct: 338 LELAKKHHVKLLDHQK-NFGHIVNA-FFETFVEEKLIEPTFVYGHPVQVSPLTKKNQEDP 395

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF----SNVGISKEVVENRFGGLYRAFQ 530
             +   +++L     E A+     +      + F        +  +           A +
Sbjct: 396 RFV--DRFELFICQKEFANAYSEINDPIDQYERFVAQLEEAKLGNDEANELDMEFIEALE 453

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            GMPP GG+  G+DR+VMLL    ++R V LFP  ++
Sbjct: 454 YGMPPTGGLGIGVDRLVMLLTSNDSIRNVLLFPHMKD 490


>gi|110800091|ref|YP_695221.1| aspartyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|110674738|gb|ABG83725.1| aspartyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 429

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 15/251 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            + +   V + GW++++R    I F+ IRD  G+ Q VA  +        ++  E V+ I
Sbjct: 10  KNHLNENVCIKGWIYKIRRLKFITFIIIRDRSGLVQCVAENEKL---DLSNLTVESVVSI 66

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYPESIRFKYRFL 131
           +G +        +        E+  + IEI++ A+E       +   +         R L
Sbjct: 67  EGALKESKNSLNS-------FEIQVENIEIINKAKEELKIEVNKETLDINLDTMLNNRML 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR   ++     +  I +S R  +  E F E  TP +     EG  +          ++
Sbjct: 120 SLRHKKINAIFKVQNIITDSFREFLNKEGFTEIHTPKIVKEGAEGGTEVFEVKYFENKAY 179

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DIL 250
            A  Q+PQ YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+EM F+E + DI+
Sbjct: 180 LA--QSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYVSMDLEMGFIENEFDIM 237

Query: 251 NTMENVLRGVF 261
           N  EN+L+ + 
Sbjct: 238 NLEENLLKFIL 248



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 6/127 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            Y++ +E+   DF     T        +            +DL+  G EI +GG R H  
Sbjct: 306 LYKYAKEKLNSDFLFL--TNYPRKKRPMYTMPKGEKGTHSFDLLFRGIEITTGGQRIHDY 363

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E++++     G++    E+        F+ GMP HGG+A G++RI   +LG +NVRE +L
Sbjct: 364 EMLVENMKYKGLNPNSYES----YLELFKLGMPKHGGLAIGLERITARILGLENVREATL 419

Query: 562 FPMSQNF 568
               +  
Sbjct: 420 ITRDRKR 426


>gi|66511652|ref|XP_623490.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like [Apis
           mellifera]
          Length = 556

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 62/344 (18%), Positives = 120/344 (34%), Gaps = 23/344 (6%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
              +++ GWVHR+R  G  ++F+ +RD  G  Q V          A ++ +E  + + G 
Sbjct: 133 NQRIKVLGWVHRLRRQGRALMFITLRDGTGFLQCVFTDTLCQTYDALTLSTEASIEVFGT 192

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +                 EL      ++  +           E    ++   R + +R +
Sbjct: 193 LKIVPEG----KNAPDGHELHIDFWRLIGTSPPGGADSILNEEALPDVQLDNRHIMIRGE 248

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
              + +  R+ +  + R         E + P L  +  EG           + +F  L Q
Sbjct: 249 NTSRILRLRSVLTQAFRDHFHERGCYEVTPPTLVQTQVEGGSTLFKLDYFGEEAF--LTQ 306

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       + IA  +R E  R+ R   E+  ++ E +F+  +D+LN +E++
Sbjct: 307 SSQLYLETCLP-AMGDVYCIAQSYRAEQSRTRRHLAEYTHVEAEYAFITFEDLLNRLEDM 365

Query: 257 LRGVFEEFSN-------------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +   N                    F R+ Y DAI  Y       ++    +   
Sbjct: 366 VCDVVDRVLNSNLGYLIKELNPDFKIPKRPFKRMDYKDAIE-YLRANNITKDDGTFYEFG 424

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR-AFCDRMNE 346
           E       R  +  ++       +    K     R A   R+ E
Sbjct: 425 EDIPEMPERKMTDTINEPIMLCKFPAEIKSFYMQRCADNKRLTE 468



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K       F M +          +         L+ N  EI  G +R    + +L+ +SN
Sbjct: 447 KFPAEIKSFYMQRCADNKRLTESVDV-------LLPNVGEIIGGSMRIWNYDELLEGYSN 499

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             I  +     +       + G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 500 ANIDPKP----YYWYTDQRKYGTCPHGGFGLGLERFLCWLLNRYHIREVCLYPR 549


>gi|297804454|ref|XP_002870111.1| hypothetical protein ARALYDRAFT_914989 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315947|gb|EFH46370.1| hypothetical protein ARALYDRAFT_914989 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 567

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 53/292 (18%), Positives = 101/292 (34%), Gaps = 32/292 (10%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
            D G+  VG  + + GWV  +R    + F++I D   ++ +    +S   E    V S  
Sbjct: 101 ADEGLGRVGQSLNIMGWVRTLRSQSSVTFIEINDGSCLSNLQCVMNSDA-EGYDQVESGS 159

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           +L   G  +S     + +     ++EL  +KI ++   +        ++           
Sbjct: 160 IL--TGASVSVQGTIVASQGTKQKVELKVEKIIVVGKCDSSYPIQ--KKRVSREFLRTKA 215

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ- 188
            L  R +T       R  +  +         F+  ++PI+TAS  EGA +    + +   
Sbjct: 216 HLRPRTNTFGAVARVRNTLAYATHKFFQESGFVWVASPIITASDCEGAGEQFCVTTLIPS 275

Query: 189 -----------------------GSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRD 222
                                    F+  P       Q      A+     +   P FR 
Sbjct: 276 SHENTDTSIDAIPKTKGGLIDWSQDFFGKPAFLTVSGQLNGETYATALSDVYTFGPTFRA 335

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           E+  + R   EF+ ++ E++F + DD +      L+ V +   +       F
Sbjct: 336 ENSNTSRHLAEFWMIEPELAFADLDDDMACATAYLQYVVKYVLDNCKEDMEF 387



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 4/102 (3%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    LV    E+  G  R    EV+      + ++K      +      
Sbjct: 469 MRENDDGKTVAAMDMLVPRIGELIGGSQREERLEVLEARLDELKLNK----ESYWWYLDL 524

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            + G  PH G   G +R+V  + G  N+R+V  FP +    +
Sbjct: 525 RRYGSVPHAGFGLGFERLVQFVTGIDNIRDVIPFPRTPASAE 566


>gi|259500617|ref|ZP_05743519.1| asparagine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|259168001|gb|EEW52496.1| asparagine-tRNA ligase [Lactobacillus iners DSM 13335]
          Length = 433

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 69/319 (21%), Positives = 118/319 (36%), Gaps = 34/319 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCI 73
           V   V++  W+   R  G I+FL  RD         +  N     FE AK++R E  L +
Sbjct: 15  VDQEVKMHVWLTDKRSSGKIMFLQFRDGTAFFQAVLLKKNVSEELFEQAKNLRQEASLYV 74

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +                 EL     ++++  +       G +E+       +R L L
Sbjct: 75  TGTINKDERSHF-------GYELQISDFQVVTNND---GYPIGNKEHGIDFLLDHRHLWL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R     ++        FI+   PIL  S+PEG  +       N  ++  
Sbjct: 125 RSKRPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEGTTELFHIEYFNSDAY-- 182

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y   + A  F + F   P FR E+ ++ R   EF+ ++ EM+++ QD+ L   
Sbjct: 183 LSQSGQLY-GEVGAHAFSKIFTFGPTFRAEESKTRRHLTEFWMMEPEMAWMHQDESLEIQ 241

Query: 254 ENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDLRNPI 297
           E +L+ V +   +                      NF R+ YD+A++       D +   
Sbjct: 242 EGLLKFVTKRILDNCEYELSILGRDPEKLRPTTEGNFARLSYDEAVKMLQDAGRDFKWGD 301

Query: 298 IMH--NVTEHFVHSEFRVF 314
                +        +  VF
Sbjct: 302 DFGAPDEAFISEQYDRPVF 320



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 15/133 (11%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D P +  N        A  PF M +     L+      +    Y       EI  G  R 
Sbjct: 316 DRPVFILN-----YPTAIKPFYMKKNPENPLEYLCADVLAPEGY------GEIIGGSERE 364

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              + +       G+  +  E          + G  PH G   G +R +  +    ++RE
Sbjct: 365 EDYDTLKAQIEEAGLDLKDYE----WYLDLRKYGSVPHSGFGIGFERFLGWICKLDHIRE 420

Query: 559 VSLFPMSQNFCDL 571
              FP   N  + 
Sbjct: 421 AIPFPRLINRLEP 433


>gi|15236037|ref|NP_193462.1| NS1; asparagine-tRNA ligase [Arabidopsis thaliana]
 gi|55584148|sp|O48593|SYNO_ARATH RecName: Full=Asparaginyl-tRNA synthetase,
           chloroplastic/mitochondrial; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS; Flags:
           Precursor
 gi|19310458|gb|AAL84964.1| AT4g17300/dl4685w [Arabidopsis thaliana]
 gi|332658474|gb|AEE83874.1| asparaginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 567

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 54/292 (18%), Positives = 101/292 (34%), Gaps = 32/292 (10%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
            D G+S VG  + + GWV  +R    + F++I D   ++ +     S   E    V S  
Sbjct: 101 ADEGLSRVGQSLNIMGWVRTLRSQSSVTFIEINDGSCLSNLQCVMTSDA-EGYDQVESGS 159

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           +L   G  +S     + +     ++EL  +KI ++   +        ++           
Sbjct: 160 IL--TGASVSVQGTIVASQGTKQKVELKVEKIIVVGECDSSYPIQ--KKRVSREFLRTKA 215

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ- 188
            L  R +T       R  +  +         F+  ++PI+TAS  EGA +    + +   
Sbjct: 216 HLRPRTNTFGAVARVRNTLAYATHKFFQESGFVWVASPIITASDCEGAGEQFCVTTLIPS 275

Query: 189 -----------------------GSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRD 222
                                    F+  P       Q      A+     +   P FR 
Sbjct: 276 SHENTDTSIDAIPKTKGGLIDWSQDFFGKPAFLTVSGQLNGETYATALSDVYTFGPTFRA 335

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           E+  + R   EF+ ++ E++F + DD +      L+ V +   +       F
Sbjct: 336 ENSNTSRHLAEFWMIEPELAFADLDDDMACATAYLQYVVKYVLDNCKEDMEF 387



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 4/102 (3%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    LV    E+  G  R    EV+      + ++K      +      
Sbjct: 469 MRENDDGKTVAAMDMLVPRIGELIGGSQREERLEVLEARLDELKLNK----ESYWWYLDL 524

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            + G  PH G   G +R+V  + G  N+R+V  FP +    +
Sbjct: 525 RRYGSVPHAGFGLGFERLVQFVTGIDNIRDVIPFPRTPASAE 566


>gi|328860106|gb|EGG09213.1| hypothetical protein MELLADRAFT_104502 [Melampsora larici-populina
           98AG31]
          Length = 613

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/353 (18%), Positives = 132/353 (37%), Gaps = 23/353 (6%)

Query: 16  DVGSFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           D    + ++G +H +R  G  + F D+  D + I  + +  D+      ++V   +    
Sbjct: 135 DPEDKISVAGRIHNMRQAGAKLRFYDLHADGHKIQIMASANDAEDPATFEAVHDIFR--- 191

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSV-------AEELPLPVFGEREY-----P 121
            G ++  +          G++ +  +K+ +LS        AE   +   G  E       
Sbjct: 192 RGDIVGVTG--FPMRTKKGELSIGPRKMILLSPNLHQLPRAETSVVTESGTTETKFGFKD 249

Query: 122 ESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           +  R + R+LDL  +  +    V R RIIN +R  +    F+E  TP++   +       
Sbjct: 250 QEQRHRKRYLDLIMNKDVRDVFVTRARIINYVRRFLDDLGFLEVETPMMNMIAGGATAKP 309

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +    + G    L  AP+ Y + L+  G DR ++I   FR+E       P EF   +  
Sbjct: 310 FITHHNSLGLDLFLRIAPELYLKELVVGGLDRVYEIGRVFRNESIDLTHNP-EFSICEFY 368

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI--I 298
           M++ +  D+++  E ++ G+  + + G+   +        + +      +P  R  +   
Sbjct: 369 MAYADMYDLMDLTETLISGLVYKITGGSYKIDYHPEGLNSEKVYTLDFSRPWKRFNMIEE 428

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           + +  +    S      K L      E+           R     +++     
Sbjct: 429 LESQLKVKFPSGKDFEDKELMTKFLDELCVKHNVDCSAPRTNSRLLDKLVGEF 481



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 4/94 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCG 532
               +++      EI +     +      + F      K   ++   G       A + G
Sbjct: 511 GLCERFETFVATKEICNAYTELNDPFDQRERFEEQTRQKAAGDDEAQGIDETFIDALEHG 570

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +PP GG   GIDR+VMLL    +++EV  FP ++
Sbjct: 571 LPPTGGWGLGIDRLVMLLTDNNSIKEVLCFPANK 604


>gi|168209272|ref|ZP_02634897.1| aspartyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170712713|gb|EDT24895.1| aspartyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 429

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 15/251 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            + +   V + GWV+++R    I F+ IRD  G+ Q  A  + +      ++  E V+ I
Sbjct: 10  KNHLNENVCIKGWVYKIRRLKFITFIIIRDRSGLVQCAAENEKS---DLSNLTVESVVSI 66

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYPESIRFKYRFL 131
           +G +         +  +    E+  + IEI++ A+E       +   +         R L
Sbjct: 67  EGTLKE-------SKNLLNSFEIQVENIEIINKAKEELKIEVNKETLDINLDTMLNNRML 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR   ++     +  I +S R  +  E F E  TP +     EG  +          ++
Sbjct: 120 SLRHKKINSIFKVQNIITDSFREFLNKEGFTEIHTPKIVKEGAEGGTEVFEVKYFENKAY 179

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DIL 250
            A  Q+PQ YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+EM F+E + DI+
Sbjct: 180 LA--QSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYVSMDLEMGFIENEFDIM 237

Query: 251 NTMENVLRGVF 261
           N  EN+L+ + 
Sbjct: 238 NLEENLLKFIL 248



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 6/127 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            Y++ +E+   DF     T        +            +DL+  G EI +GG R H  
Sbjct: 306 LYKYAKEKLNSDFLFL--TNYPRKKRPMYTMPKGEKGTHSFDLLFRGIEITTGGQRIHDY 363

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E++++     G++    E+        F+ GMP HGG+A G++RI   +LG +NVRE +L
Sbjct: 364 EMLVENMKYKGLNPNSYES----YLELFKLGMPKHGGLAIGLERITARILGLENVREATL 419

Query: 562 FPMSQNF 568
               +  
Sbjct: 420 ITRDRKR 426


>gi|71994340|ref|NP_001022304.1| lysyl (K) tRNA Synthetase family member (krs-1) [Caenorhabditis
           elegans]
 gi|62630002|gb|AAX88810.1| Lysyl (k) trna synthetase protein 1, isoform c [Caenorhabditis
           elegans]
          Length = 514

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 10/264 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
               V   V ++G +H  R  G  ++F DI       Q++AN      ++   V     +
Sbjct: 39  KEQVVEEIVSVAGRIHSKRESGSKLVFYDIHGEGTHIQIMANAKFHTGDV-DFVTLHDRI 97

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
               +V      T       G++ L   +I  L+      LP        + +RF+ R+L
Sbjct: 98  KRGDIVGFTGRAT---RTKAGELSLIPNEILQLTPCL-HMLPHSHFGLKDKELRFRKRYL 153

Query: 132 DLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQG 189
           DL     +  N V R++II  +R  +    F+E  TPI+   +    A+ F+        
Sbjct: 154 DLILNPRVKDNFVIRSKIITFLRRYLDNLGFLEVETPIMNQIAGGATAKPFITHHNDLDM 213

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           + + L  AP+ Y ++L+  G DR +++   FR+E       P EF   +  M++ + +D+
Sbjct: 214 NLF-LRVAPELYHKMLVVGGIDRVYEVGRLFRNEGIDLTHNP-EFTTCEFYMAYADYEDV 271

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN 273
           +   E++L  +         +  +
Sbjct: 272 IQLTEDLLSSMVMSIKGTYKIEYH 295



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 4/95 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++L     EIA+     +      Q F      K+  ++           A + 
Sbjct: 402 PGLTERFELFAVTREIANAYTELNDPITQRQRFEQQAKDKDAGDDEAQMIDETFCNALEY 461

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP GG   GIDR+ M+L    N++EV LFP  +
Sbjct: 462 GLPPTGGWGMGIDRLSMILTDNNNIKEVLLFPAMR 496


>gi|193666902|ref|XP_001951757.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like
           [Acyrthosiphon pisum]
          Length = 560

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 63/339 (18%), Positives = 125/339 (36%), Gaps = 22/339 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            S +++ GWVHR+R  G  ++F+ +RD  G  Q V N        A  + +E  + + G+
Sbjct: 137 NSRIKMYGWVHRLRRQGKSLMFITLRDGTGFIQTVLNEKLCQTYNALMLSTESSVLLFGV 196

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  EL     E++++A           +    +    R + +R +
Sbjct: 197 LKQVPEG----KSAPGGHELQVDYWELITLAPPGGADSILNEDANPEVLLDNRHIAIRGE 252

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
              K ++ R+ +  + R   + +  IE   P L  +  EG           Q ++  L Q
Sbjct: 253 NTSKILLMRSVVTQAFRMHNLDKGCIEVVPPTLVQTQVEGGSTLFKLDYFGQEAY--LTQ 310

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       F +A  +R E  R+ R   E+  ++ E +F+  DD+L+ +E++
Sbjct: 311 SSQLYLETCLP-ALGDVFCMAQSYRAEQSRTRRHLSEYTHVEAEFAFITFDDLLDRIEDM 369

Query: 257 LRGVFEEFSNGNT-------------VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V +                        F R+ Y  AI+    +    +     +   
Sbjct: 370 ICDVVKRVLESPHADIVKQLNPEFAAPKRPFKRMDYKMAIQFLRENNI-TKEDNSFYEFG 428

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           E       R  + +++       +    K    +R   D
Sbjct: 429 EDIPEMAERKMTDLINQPIMLCRFPAEIKSFYMSRCPED 467



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 473 DLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
              +      D++  G  EI  G +R    E +L  +  VGI  +     +       + 
Sbjct: 465 PEDNTLTESVDVLLPGVGEIVGGSMRIWDEEELLAGYKKVGIDPKP----YYWYTDQRKF 520

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 521 GSCPHGGYGLGLERFLCWLLNRYHIREVCLYPR 553


>gi|315503430|ref|YP_004082317.1| lysyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315410049|gb|ADU08166.1| lysyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 502

 Score =  169 bits (428), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 62/283 (21%), Positives = 114/283 (40%), Gaps = 20/283 (7%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD 55
           RT +   L          +  G  V ++G V  +R  G + F  +RD  G   Q + + D
Sbjct: 43  RTTTLAQLRERYGDLPTDTATGDRVSVTGRVIFIRNTGKLCFATLRDGDGTEVQAMLSLD 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                 A+ +     L   G  +  + E I +    G++ + A++  + + A        
Sbjct: 103 RVG---AERLGDWKRLVDLGDHVGVTGEVITSR--RGELSVLAEEWAVTAKALRPLP--V 155

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +   E  R + R++DL      + +V+ R   + S+R  +  ++FIE  TP+L     
Sbjct: 156 AHKPLSEESRVRQRYVDLVVRPQARQMVRTRATAVRSLRDTLHGQDFIEVETPMLQLLHG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  G DR F+I   FR+E   S   P E
Sbjct: 216 GAAARPFVTHSNALDTDLY-LRIAPELFLKRAVVGGVDRVFEINRNFRNEGIDSSHSP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           F  L+   ++ +   +     N+++      +    V++   R
Sbjct: 274 FAMLEAYQAYGDYHTMAELTRNLVQQAAVAVAGSTVVTHADGR 316



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 28/151 (18%)

Query: 419 HIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +A+EL   ++  +     ++MD+P     EE   +  AH                    
Sbjct: 369 KLAEELFEELVVPSLRAPTFVMDYP-----EETSPLTRAHR----------------SEP 407

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
             A ++DL   GFE+ +         V  +            ++          RA + G
Sbjct: 408 GLAEKWDLYVLGFELGTAYSELVDPVVQRERLVAQAQLAARGDDEAMRLDEDFLRAMEYG 467

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP GG+  GIDR++M L G   +RE  LFP
Sbjct: 468 MPPSGGMGMGIDRLLMALTGLG-IRETILFP 497


>gi|312864673|ref|ZP_07724904.1| asparagine--tRNA ligase [Streptococcus downei F0415]
 gi|311099800|gb|EFQ58013.1| asparagine--tRNA ligase [Streptococcus downei F0415]
          Length = 448

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 67/365 (18%), Positives = 127/365 (34%), Gaps = 47/365 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
              +G  V +  WV      G + FL +RD       V   P+             F   
Sbjct: 12  KDHLGQEVTIGAWVANKSGKGKLAFLQLRDGTAFFQGVAFKPNFIEKYGEEEGLEKFNQI 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + + G +                 E+    +E++  + + P+     +E+  
Sbjct: 72  KHLSQETSVLVTGTIKEDDRSKF-------GYEMDVIDVEVIGQSHDYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                 R L LR       +  R  II +         FI+  +PIL+ ++ E + +   
Sbjct: 122 DFLMDNRHLWLRSRKQMAIMQIRNAIIYATYDFFDKNGFIKFDSPILSGNAAEDSTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                 G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S
Sbjct: 182 TDYF--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRY 286
           F+  D  ++  E  ++ + +   +                       F R+ YD+AI   
Sbjct: 239 FLNHDQSMDLQEAYVKALIQGVLDKAPHALEILERDVDLLKSYIEKPFKRVSYDEAIDLL 298

Query: 287 GTDKPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
              + D       L +     +  E ++ + F V + +++    ++ + +    G  +R 
Sbjct: 299 QAHENDPDTDYDHLEHGDDFGSPHETWISNYFGVPTFVVNYPASFKAFYMKPVPGNPDRV 358

Query: 340 FCDRM 344
            C  +
Sbjct: 359 LCADL 363



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  + +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPDRVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     + + K   E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDDYDALVAKMDALEMDKSEYE----FYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|149235760|ref|XP_001523758.1| asparaginyl-tRNA synthetase [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452737|gb|EDK46993.1| asparaginyl-tRNA synthetase [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 549

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/288 (22%), Positives = 111/288 (38%), Gaps = 23/288 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +V S V + GW+HR+R   G+ F+ +RD  G  Q V   D A     + +  E  + I
Sbjct: 120 LENVDSRVLVQGWIHRLRVQKGLAFITLRDGTGFLQCVLTGDLAKARQTQELTIESTVAI 179

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFL 131
            G++              G +EL A   +IL +A   E       +     S+    R L
Sbjct: 180 KGVISKLPEG----KTAPGGVELKADYYKILGLAPGGEDAFTNKIQEGADPSLLLDQRHL 235

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR ++L   +  R   + S+R   + E  +E + P +  +  EG           + +F
Sbjct: 236 TLRGESLSAVMKVRAAFLKSIRRVYVEEGLLEVTPPCMVQTQVEGGSTLFKMDYYGEEAF 295

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  +       + +   FR E   + R   E+  ++ E+ F+  DD+L 
Sbjct: 296 --LTQSSQLYLETCLP-ALGDVYCVQESFRAEKSHTRRHLSEYTHIEAELGFLSFDDLLK 352

Query: 252 TMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRR 285
            +E V+    +                         F R+ Y DA+  
Sbjct: 353 HIETVIVKTVQYVLEDPVAGKLIEQLNPGFKAPQLPFKRMQYIDALDW 400



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 41/121 (33%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R++  E +L  F  
Sbjct: 440 RFPVEIKSFYMQKCKDDPRVTESVDV-------LMPNVGEITGGSMRSYEYEDLLAGFKR 492

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I        +       + G   HGG   G +RI+  L     VR+ SL+P     C 
Sbjct: 493 EKIDPAP----YYWFLDQRRYGTCEHGGYGLGTERILAWLCDRFTVRDCSLYPRFTGRCK 548

Query: 571 L 571
            
Sbjct: 549 P 549


>gi|332796362|ref|YP_004457862.1| lysyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694097|gb|AEE93564.1| lysyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 494

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/327 (18%), Positives = 126/327 (38%), Gaps = 19/327 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +  +G V  +R HG   F+DI D     Q+    +    E+       +     G ++  
Sbjct: 54  ISTAGRVANIRRHGKASFVDIFDEGERLQLYLRIN----ELGDKYEEFFNYIGRGDIIGV 109

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139
             +        G++ L  +  E+L+ A   P       +     R+ +R++D L  D+  
Sbjct: 110 KGDLFYTG--KGELTLLVKSYELLAKALIEPPDW---TKLSTEFRYAHRYVDFLYNDSSR 164

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           K +  R + I  +R  + ++ FIE  TPIL                      + L  + +
Sbjct: 165 KAMEIRFKTIKEIRDYLNSKGFIEVETPILQPVYGGALAKPFKSKVNYLNEEWYLRISLE 224

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y +  +  GFD+ F+I   FR+ED      P EF +L++  ++ + +DI+   E++L+ 
Sbjct: 225 LYLKRFIVGGFDKVFEIGKVFRNEDIDVTHNP-EFTELELYWAYADYNDIMKLTEDMLKT 283

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILS 319
           V  +    N       ++ Y  A + Y  +    R   +  +++E  +  +    +    
Sbjct: 284 VVSKVLGDN-------KLKYKVADKEYEIELSQFRKITMFDSLSE-ALGKDVEKMTDDEL 335

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                +   IP           +++ +
Sbjct: 336 KELMKKYGLIPRGNLYVRGLMIEKLFD 362



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 75/222 (33%), Gaps = 29/222 (13%)

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
           +  G   L Y     +    ++    +        +EA+   ++    D    +      
Sbjct: 287 KVLGDNKLKYKVADKEYEIELSQFRKITMF--DSLSEALGKDVEKMTDDELKELMKKYGL 344

Query: 409 FCSFAADARNHIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
                   R  + ++L   ++  N  +  +I D+P      E   +   H          
Sbjct: 345 IPRGNLYVRGLMIEKLFDKLVTPNLIQPTFITDYPI-----ETTPLCKPHR--------- 390

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN----VGISKEVVENRF 522
                         +++L   G E+A+     +   +  + F      +    E      
Sbjct: 391 -------SKPGLVERFELYIAGMELANAYTELNDPILQDKLFKEEQEMMKRGDEEAHPYD 443

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
               RA   GMPP GG+  GIDR+VMLL   ++++EV  FPM
Sbjct: 444 KDFVRALSYGMPPTGGLGIGIDRLVMLLTNNQSIKEVIPFPM 485


>gi|302530771|ref|ZP_07283113.1| lysyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302439666|gb|EFL11482.1| lysyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 504

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/273 (21%), Positives = 106/273 (38%), Gaps = 20/273 (7%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD 55
           RTH+   +             G  V ++G V  +R  G + F  +R+  G   Q + +  
Sbjct: 45  RTHTLAQIRAEHSGLEADTSTGQSVGVTGRVMFLRNTGKLCFATLREGDGTELQAMLSLA 104

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   S+ +       G  +    E I +    G++ + A   +I + A       F
Sbjct: 105 QVGPE---SLAAWKSDVDLGDHVFVHGEVITSK--RGELSVLADSWQIAAKALRPLPVAF 159

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL      +++V+ R+ ++ S+R       F E  TP+L     
Sbjct: 160 --KELAEETRIRQRYVDLIMRPRARDVVRTRSGVMRSLRESFHRRGFTEVETPMLQTLHG 217

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       + L  AP+ Y +  +  G ++ F+I   FR+E   S   P E
Sbjct: 218 GAAARPFVTHSNAFDLELF-LRIAPELYLKRCVVGGIEKVFEINRNFRNEGSDSSHSP-E 275

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           F  L+   ++   D        +++   E    
Sbjct: 276 FAMLEYYEAYATYDTNAVMTRELIQEAAENVLG 308



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 57/154 (37%), Gaps = 28/154 (18%)

Query: 416 ARNHIAQELG--IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           A   + +EL   ++        ++ DFP      E   +   H                 
Sbjct: 368 AHGKLVEELWEHLVGDGLHAPTFVRDFPL-----ETSPLTRQHR---------------- 406

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
                A ++DL   GFE+A+G        V  Q  +         ++          RA 
Sbjct: 407 SRPGVAEKWDLYVRGFELATGYSELVDPVVERQRLTEQARLAAAGDSEAMRLDEDFLRAL 466

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + GMPP GG+  GIDR++M L G   +RE  LFP
Sbjct: 467 EYGMPPSGGVGMGIDRLLMALTGLG-IRETILFP 499


>gi|19921528|ref|NP_609948.1| Asparaginyl-tRNA synthetase [Drosophila melanogaster]
 gi|5901824|gb|AAD55420.1|AF181634_1 BcDNA.GH06451 [Drosophila melanogaster]
 gi|7298549|gb|AAF53768.1| Asparaginyl-tRNA synthetase [Drosophila melanogaster]
 gi|220943736|gb|ACL84411.1| Aats-asn-PA [synthetic construct]
 gi|220953642|gb|ACL89364.1| Aats-asn-PA [synthetic construct]
          Length = 558

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 68/349 (19%), Positives = 133/349 (38%), Gaps = 23/349 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G ++  S V++ GWVHR+R  G  +IF+ +RD  G  Q V N        A ++ +E  +
Sbjct: 130 GTANRDSRVKVYGWVHRLRRQGKSLIFITLRDGTGFLQCVLNDQLCQTYDALTLSTESSV 189

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  EL+    E++ +A           E    ++   R +
Sbjct: 190 VLFGTLKLVPEG----KTAPGGHELNVDYWELIGLAPPGGADAILNEEAQPDVQLDNRHI 245

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R+ +  + R    A  + E + P L  +  EG           + ++
Sbjct: 246 MIRGENTSKVLKMRSVVTQAFRGHYEARGYNEVTPPTLVQTQVEGGSTLFKLKYFGEEAY 305

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ----- 246
             L Q+ Q Y +  +       F I+  +R E  R+ R   E+  ++ E  F+       
Sbjct: 306 --LTQSSQLYLETCLP-ALGDVFTISQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLD 362

Query: 247 ---DDILNTMENVLR----GVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              D + + ++ VL+     + +E + +       F R+ Y+DAI+    +    ++   
Sbjct: 363 RLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRRMNYEDAIKWLKENNV-TKDDGT 421

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
            +   E    +  R  +  ++       +    K     R   D R+ E
Sbjct: 422 FYEFGEDIPEAPERKMTDTINEPIMLCRFPAEIKSFYMQRCKEDQRLTE 470



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R + SE +L+ +  
Sbjct: 449 RFPAEIKSFYMQRCKEDQRLTESVDV-------LLPNVGEIVGGSMRIYDSEELLKGYKR 501

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI  +     +         G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 502 EGIDPQP----YYWYTDQRVYGTMPHGGYGLGLERFLCWLLNRYHIREVCLYPR 551


>gi|268319458|ref|YP_003293114.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
 gi|262397833|emb|CAX66847.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
          Length = 432

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 75/306 (24%), Positives = 113/306 (36%), Gaps = 32/306 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      FE AKS+R E 
Sbjct: 10  SSKHVDQEVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVIRKNDVSEEVFEAAKSLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G V                 E+    +EI+S  E       G +E+        R
Sbjct: 70  SFYITGTVHEDKRSHF-------GYEIQISDLEIVSNNE---GYPIGNKEHGVDFLLDNR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +  +       E FI+   PI   S+PEG          N  
Sbjct: 120 HLWLRSKRPFAIMQIRNTMFKATIDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNND 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDL 293
           L+  E  L  + ++    N                    NF R+ YDDAI+       D+
Sbjct: 237 LDIQERYLAYMVKQVLENNEYELKILGRDPEKLRPTTEGNFTRLSYDDAIKMLQEAGRDI 296

Query: 294 RNPIIM 299
           +     
Sbjct: 297 KWGDDF 302



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 52/175 (29%), Gaps = 28/175 (16%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEE 449
           +G+       D +K    A         + G  +            +I+++P        
Sbjct: 274 EGNFTRLSYDDAIKMLQEAGR-DIKWGDDFGAPDEGYISEQFDRPVFIVNYP-------- 324

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                   PF M +      +      I    Y       EI  G  R    E++ Q   
Sbjct: 325 ----TTIKPFYMKKNPDNPKEYLCADVIAPEGY------GEIFGGSEREGNYEILKQQIE 374

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             G++ E  +          + G  PH G   G +R +  +    ++RE   FP 
Sbjct: 375 EAGLNLEDYQ----WYLDLRKFGGVPHSGFGMGFERTIAWICKLDHIREAIPFPR 425


>gi|42519125|ref|NP_965055.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|59798573|sp|Q74JA9|SYN_LACJO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|41583412|gb|AAS09021.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|329667340|gb|AEB93288.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 432

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 75/306 (24%), Positives = 113/306 (36%), Gaps = 32/306 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      FE AKS+R E 
Sbjct: 10  SSKHVDQEVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVIRKNDVSEEVFEAAKSLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G V                 E+    +EI+S  E       G +E+        R
Sbjct: 70  SFYITGTVHEDKRSHF-------GYEIQISDLEIVSNNE---GYPIGNKEHGVDFLLDNR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +  +       E FI+   PI   S+PEG          N  
Sbjct: 120 HLWLRSKRPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNND 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDL 293
           L+  E  L  + ++    N                    NF R+ YDDAI+       D+
Sbjct: 237 LDIQERYLAYMVKQVLENNEYELKILGRDPEKLRPTTEGNFTRLSYDDAIKMLQEAGRDI 296

Query: 294 RNPIIM 299
           +     
Sbjct: 297 KWGDDF 302



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 52/175 (29%), Gaps = 28/175 (16%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEE 449
           +G+       D +K    A         + G  +            +I+++P        
Sbjct: 274 EGNFTRLSYDDAIKMLQEAGR-DIKWGDDFGAPDEGYISEQFDRPVFIVNYP-------- 324

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                   PF M +      +      I    Y       EI  G  R    E++ Q   
Sbjct: 325 ----TTIKPFYMKKNPDNPKEYLCADVIAPEGY------GEIFGGSEREGNYEILKQQIE 374

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             G++ E  +          + G  PH G   G +R +  +    ++RE   FP 
Sbjct: 375 EAGLNLEDYQ----WYLDLRKFGGVPHSGFGMGFERTIAWICKLDHIREAIPFPR 425


>gi|170761787|ref|YP_001785939.1| asparaginyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169408776|gb|ACA57187.1| asparagine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 463

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 74/432 (17%), Positives = 143/432 (33%), Gaps = 68/432 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWV 70
               +   V+++GWV  VR      F+++ D      V          F+    +     
Sbjct: 13  TEKHMDKEVKINGWVRTVRDSKNFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G+V                 E+ A ++ I   +     P+  +R   E +R     
Sbjct: 73  VEVEGIVQPTPN-------AKQPFEIKATRVSIEGKSSTDY-PLQKKRHTFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++      + F+  +TPI+T S  EGA +    + ++   
Sbjct: 124 LRPRSNAFSAVFRVRSLAAYAVHKFFQEKGFVYTNTPIITGSDCEGAGEMFQLTTMDLNN 183

Query: 190 -------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+   A      Q      A  F   +   P FR E+  + R   E
Sbjct: 184 IPKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHASE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSN 272
           F+ ++ EM+F E  D L+  E +++ V                            N V++
Sbjct: 244 FWMIEPEMAFAELTDYLDNAEEMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDNVVNS 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           +F RI Y +A+             +   +   TEH  +   ++F K + V    +     
Sbjct: 304 DFKRITYTEAVELLQKSGAKFDYEVEWGIDLQTEHERYLTEQIFKKPVFVTDYPKGI--- 360

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR 390
                  +AF  R+N+  ++     L          G    +G   +   +   E     
Sbjct: 361 -------KAFYMRLNDDGKTVAAADLLV-------PGVGEIIGGSQREERLDVLEKRMEE 406

Query: 391 LDMQDGDSCFFI 402
           L++   D  +++
Sbjct: 407 LNLNKEDYWWYL 418



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 24/138 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P        K I      F M        + ND     A    LV    EI 
Sbjct: 349 KPVFVTDYP--------KGIKA----FYM--------RLNDDGKTVAAADLLVPGVGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+ +    + ++K      +       + G   H G   G +RI+M + G
Sbjct: 389 GGSQREERLDVLEKRMEELNLNK----EDYWWYLELRKYGETKHSGYGLGFERILMYITG 444

Query: 553 AKNVREVSLFPMSQNFCD 570
             N+R+V  FP +    +
Sbjct: 445 MTNIRDVIPFPRTPGSAE 462


>gi|295424854|ref|ZP_06817569.1| asparagine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065420|gb|EFG56313.1| asparagine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 432

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 73/322 (22%), Positives = 120/322 (37%), Gaps = 34/322 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWV 70
              V   V++  W+   R  G IIFL +RD     Q V    +     FE AK++R E  
Sbjct: 11  SKHVDEEVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRNNDVSDEVFEAAKTLRQEAS 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             I G V                 E+    ++I+S  E       G +E+       +R 
Sbjct: 71  FYITGTVHKDERSHF-------GFEIQISDLKIVSNNE---GYPIGNKEHGIDFLLDHRH 120

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R  +  +       E FI+   PI   S+PEG       +  +  +
Sbjct: 121 LWLRSKKPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVNYFDHDA 180

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y     A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ L
Sbjct: 181 Y--LSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDESL 237

Query: 251 NTMENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDLR 294
           +  E  L  + ++  + N                    NF+R+ YDDA++       D +
Sbjct: 238 DLQERYLAYMVKQVLDNNEYELRILGRDPEKLRPTTEGNFVRLPYDDAVKMLQDAGRDFK 297

Query: 295 NPIIMH--NVTEHFVHSEFRVF 314
                   +        +  VF
Sbjct: 298 WGDDFGAPDEGYISEQYDRPVF 319



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 54/175 (30%), Gaps = 28/175 (16%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEE 449
           +G+       D +K    A         + G  +            +I+++P        
Sbjct: 274 EGNFVRLPYDDAVKMLQDAGR-DFKWGDDFGAPDEGYISEQYDRPVFIVNYP-------- 324

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                +  PF M +      +      I    Y       EI  G  R    E++ Q   
Sbjct: 325 ----TSIKPFYMKKNPENPKEYLCADVIAPEGY------GEIFGGSEREGNYEILKQQIE 374

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + G++ E  +          + G  PH G   G +R +  +    ++RE   FP 
Sbjct: 375 DAGLNLEDYQ----WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPR 425


>gi|332073880|gb|EGI84358.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 447

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 131/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLI 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++ + +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKTLLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|256370809|ref|YP_003108634.1| lysyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009601|gb|ACU52961.1| lysyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 497

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/277 (21%), Positives = 118/277 (42%), Gaps = 15/277 (5%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           + G  V +SG + R+R  G   F++I+D++G+ Q+    D               L   G
Sbjct: 49  EYGKNVIISGRIIRMRKMGKASFIEIKDNHGLIQIYLKRDYEFKTKYDFFLK--KLLDIG 106

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-----EYPES--IRFKY 128
            ++            + +I + A  I++LS    +   V  +      +  E    R++ 
Sbjct: 107 DIIGIKG--FLFKTKSNKITVHAVDIKLLSKCLRVLPNVKKDETGKVHDSFEESEQRYRM 164

Query: 129 RFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186
           R+LDL  +    K  +KRT+II  +R  +  + ++E  TP+L +      AR F+     
Sbjct: 165 RYLDLIVNDKTKKLFIKRTKIIQYIRNYLNNKGYLEVETPVLQSIPGGAIARPFITHHNA 224

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  + + + + L+  G +  ++ +  FR+E    +  P EF  L++ +S+ + 
Sbjct: 225 LNIPLY-LRISNELFLKKLIVGGLESVYEFSRNFRNEGIDKNHNP-EFTILELYVSYKDY 282

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
             ++N +E +L  +  +  N   +  N   I +    
Sbjct: 283 FWMMNFIEKLLEYLCIKLYNKKLLKINNKLISFKTPF 319



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 75/236 (31%), Gaps = 38/236 (16%)

Query: 347 WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDP 406
           W  +  +  L Y+  +L     +     +           I   +    G     +    
Sbjct: 284 WMMNFIEKLLEYLCIKLYNKKLLKINNKLISFKTPFKKITILDSIKENTGFDLSGLNEKN 343

Query: 407 LKFCSFAADARNHIAQELG---IIN--------CNCFEFCWIMDFPFYEWNEEEKKIDFA 455
               +     +  I + +G   +I                +IMDFP      E   +   
Sbjct: 344 --IRNICKKLQLKIDKNMGKAKLIEQIFSEKCEKKYINPTFIMDFPI-----EMSPLTKK 396

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           H                        +++L+ NG EIA+     +     L+ F       
Sbjct: 397 HR----------------SKKGLTERFELIINGNEIANSYSELNDPIDQLKRFREQIKLF 440

Query: 516 EVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           E  +N          R+ + GMPP  GI  GIDR++MLL   K ++EV  FP  + 
Sbjct: 441 EKGDNEAMLIDWEFIRSLEFGMPPCAGIGIGIDRLIMLLTNNKCIQEVLFFPQMRQ 496


>gi|116512707|ref|YP_811614.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           SK11]
 gi|123025218|sp|Q02X21|SYN_LACLS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116108361|gb|ABJ73501.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           SK11]
          Length = 447

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 74/365 (20%), Positives = 132/365 (36%), Gaps = 47/365 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-----------NPDSACFEIA 62
              VG  V++  WV      G + FL +RD     Q V               +A F+  
Sbjct: 11  KDHVGETVKIGAWVADKSGKGKLQFLQLRDGTAFFQAVVFKPNMIEKFGEEEGTAKFDEI 70

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + + G+V   S             EL   ++E++  + + P+     +E+  
Sbjct: 71  KHLSQETSVYVTGVVKEDSRSKF-------GYELDVTELEVIGHSHDYPITP---KEHGV 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                 R L LR       +  R  II +         FI+  +PIL+ ++ E   +   
Sbjct: 121 EFLLDNRHLWLRSKRQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILSGNAAENTTELFE 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E  
Sbjct: 181 TDYFGNSAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYP 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAIRRY 286
           FV  D+ L+  E  ++ + +   +                   +   F R+ YDDAI   
Sbjct: 238 FVTHDESLDIQEAYVKALIQGVLDNAAYALETLERDTSMLQKYIDTPFKRVSYDDAIDLL 297

Query: 287 G-------TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
                   TD   + +     +  E ++ + + V + I++    ++ + +    G   R 
Sbjct: 298 QAHENDDDTDYEHVEHGDDFGSPHETWISNYYGVPTFIVNYPASFKAFYMKPVPGNPERV 357

Query: 340 FCDRM 344
            C  +
Sbjct: 358 LCADL 362



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 323 TWISNYYGVPTFIVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 369

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    +++L+  ++ G+  +     +       + G  PH G   G++R+V  
Sbjct: 370 EIIGGSERETDYDLLLKKIADFGLDPKD----YDWYLELRKFGSVPHAGFGLGLERMVTF 425

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G +++RE   FP   N    
Sbjct: 426 VAGTEHIREAIPFPRMINRIQP 447


>gi|47221098|emb|CAG12792.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 474

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/311 (18%), Positives = 107/311 (34%), Gaps = 28/311 (9%)

Query: 7   HSCG----------DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           H C            L  S  G+ +++ GWV  VR     +FL + D   +  +      
Sbjct: 17  HYCKKTPTKLRISEALSGSKFGANIKVQGWVRSVRSQKKNLFLHVNDGSSLQSL------ 70

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +I  S      L   G  +  +     +      +EL A +I ++   + +  P   
Sbjct: 71  ---QIIASSDLNNPLLTFGCAVEVTGFLKPSPHQKQPVELEADRIRVVGECDPVDFPFKI 127

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           +  +      ++  L  R +     +  R+    ++        + +  TP++T++  EG
Sbjct: 128 KERHGVDYIRQFPHLRCRTNVFGSLLRVRSEATAAIHSYFQENGYTQIHTPVITSNDCEG 187

Query: 177 ARDFLVP--------SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           A +            +  N  S  A      Q    +M+  F   +   P FR E+ +S 
Sbjct: 188 AGELFQVEPQISEGDANENFFSVPAFLTVSGQLHLEIMSGAFSEVYTFGPTFRAENSQSR 247

Query: 229 RLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
           R   EFY ++ E+SF    +D+   +E+V R   E                     R   
Sbjct: 248 RHLAEFYMVEAELSFTQSIEDLTEVVEDVFRSATERVLTQCAEDVALFHKHVSPGHRDSV 307

Query: 288 TDKPDLRNPII 298
            D    + PII
Sbjct: 308 DDWLRKKFPII 318


>gi|206896287|ref|YP_002247421.1| lysyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206738904|gb|ACI17982.1| lysyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 491

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/297 (22%), Positives = 118/297 (39%), Gaps = 27/297 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSV-RSE 68
           +  +  G    +   V  +R HG + F D++D  G  Q+    D     ++  K      
Sbjct: 35  VRQASDGDNFSVMARVTSIRQHGKLTFADLKDFTGRLQISFRKDVLGDKYDFFKKFIDVG 94

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V+ + G V              G++ L  +   + S     PLP          +R++ 
Sbjct: 95  DVIYVRGSVYHTGR---------GELTLDVEDFRLQSKCLR-PLPEKWHGVKDPEVRYRQ 144

Query: 129 RFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R+LDL  D   +    KR  II ++R  + ++ F+E  TPIL    S   A+ F+     
Sbjct: 145 RYLDLIIDDDSRERFRKRADIIKAIRELLWSKGFVEVETPILQPIPSGASAKPFVTHHNA 204

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  AP+ Y + L+  G  + F++   FR+E    +  P EF  L++  +  + 
Sbjct: 205 LDIDLY-LRIAPELYLKRLVVGGVHKVFELGKNFRNEGIDQNHNP-EFTMLELYQTPGDY 262

Query: 247 DDILNTMENVLRGVFE--------EFSNGN-TVSNNFLRICYDDAIRRYGT-DKPDL 293
           +D++   E++     +         F      +S  F R+ + +A +     D  DL
Sbjct: 263 EDMMRITEDIFSAAAQVSGAAECVSFKGMTVNLSRPFKRLTFKEAFKHIANLDWSDL 319



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 25/143 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            ++  +  +  +++D+P  E +   K+                  K +D   +  ++++L
Sbjct: 352 ELVQPHLVDPTFVLDYPV-EISPLAKR------------------KPDDPRFV--YRFEL 390

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIA 540
              G E+A+              F      KE  E            A + G+PP GG+ 
Sbjct: 391 FVAGMEMANAFSELQDPFDQKARFEEQMKLKEQGEEEVILMDEDFVVALEYGLPPTGGLG 450

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            GIDR+VMLL  A+N+++V  FP
Sbjct: 451 VGIDRLVMLLTEAENIKDVIWFP 473


>gi|313888504|ref|ZP_07822171.1| asparagine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845533|gb|EFR32927.1| asparagine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 462

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 71/371 (19%), Positives = 128/371 (34%), Gaps = 51/371 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
           +   + LSGWV   R      F+++ D       QVV   +   F+  +       L I 
Sbjct: 16  LDKEIVLSGWVKTSRASKNFGFIELTDGTVFKPIQVVYGKELENFDEVEKFPISSSLEIS 75

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++    +  +        EL A KIE +  + +   P+  +R   E +R     L  R
Sbjct: 76  GKIVKSPGKNQS-------FELQANKIEAI-CSSDPSYPLQKKRHTMEYLR-TIAHLRPR 126

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +T +     R+ I  ++      + F+    PI+T S  EGA +    + ++       
Sbjct: 127 ANTFNAVFRVRSLIAYAIHKFFQEKGFVYVHAPIITTSDAEGAGEMFQVTTLDIDKIAKS 186

Query: 190 ---------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+          Q +    A  F   +   P FR E+  + R   EF+ +
Sbjct: 187 EPTEVDYSKDFFNKKTHLTVSGQLEAEAFAEAFRDIYTFGPTFRAENSNTQRHAAEFWMI 246

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLR 276
           + EM+F + +  ++  E +L+ +                            N V N F R
Sbjct: 247 EPEMAFADLNVNMDVSEEMLKYIISYVLENAPQEMEFFNNFIDKGLLERLHNVVENEFAR 306

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           I Y +AI        +   P+   +   TEH  +    V+ K + V    +         
Sbjct: 307 ITYTEAIEILEKADKEFNYPVSWGIDLQTEHERYITEEVYKKPVFVTDYPKEIKAFYMYE 366

Query: 335 GGNRAFCDRMN 345
             ++     M+
Sbjct: 367 NEDKKTVAAMD 377



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 53/141 (37%), Gaps = 27/141 (19%)

Query: 427 INCNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           I    ++   ++ D+P     +E K        F M +                   DL+
Sbjct: 341 ITEEVYKKPVFVTDYP-----KEIK-------AFYMYENED---------KKTVAAMDLL 379

Query: 486 CNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
             G  EI  G  R H  +V+ +   N+G+      + +       + G   H G   G +
Sbjct: 380 VPGVGEIIGGSQREHRFDVLEEKMKNIGMDM----DNYNWYLDLRRYGSVVHSGFGLGFE 435

Query: 545 RIVMLLLGAKNVREVSLFPMS 565
           R VM + G KN+R+V  FP +
Sbjct: 436 RAVMYITGMKNIRDVIPFPRT 456


>gi|289739549|gb|ADD18522.1| aspartyl tRNA synthetase [Glossina morsitans morsitans]
          Length = 538

 Score =  169 bits (427), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/289 (21%), Positives = 119/289 (41%), Gaps = 28/289 (9%)

Query: 12  LGVSDVGSF-----VRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIA 62
           + ++++G +     + L G VH  R  G   FL +R        I  V  N      + A
Sbjct: 82  VAIANLGQYTGKSAIWLRGRVHTSRAKGKQCFLILRQQSSTVQCILSVGDNTSKQMVKFA 141

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP- 121
            ++  E ++ I    ++  ++    +     +EL+ Q++ ++S A+        +   P 
Sbjct: 142 GNIHKESIVDIQAKAVAVPSKI--ESCTEQNLELAVQQLFVVSQAKAQLPLQIEDASRPD 199

Query: 122 -------------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                        +  R   R LDLR             +    R  +  + F E  TP 
Sbjct: 200 NLDDTDALNTRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPK 259

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           + +++ EG  +    S     ++ A  Q+PQ YKQ+ +A+ FD+ F +   FR ED  + 
Sbjct: 260 IISAASEGGANVFTVSYFKDSAYLA--QSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTH 317

Query: 229 RLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           R   EF  LD+EM+F     ++L+T+ +    +F+   +   +    +R
Sbjct: 318 RHLTEFVGLDLEMAFKYHYHEVLHTIGDTFTAMFKGLRDLYALEIEAVR 366



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                 + +  YD+   G EI SG  R H +E + +   +
Sbjct: 430 KFPLAIRPFYTMPD--------PTNPVYSNSYDMFMRGEEILSGAQRIHDAEFLTERAKH 481

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI      N+      +F+ G PPH G   G++R+VML LG  N+R+ S+FP       
Sbjct: 482 HGIDI----NKIAAYIESFRFGCPPHAGGGIGLERVVMLYLGLDNIRKTSMFPRDPKRLT 537

Query: 571 L 571
            
Sbjct: 538 P 538


>gi|116629669|ref|YP_814841.1| asparaginyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|282852213|ref|ZP_06261565.1| asparagine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311110688|ref|ZP_07712085.1| asparagine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|122273393|sp|Q043G9|SYN_LACGA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116095251|gb|ABJ60403.1| asparaginyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|282556632|gb|EFB62242.1| asparagine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311065842|gb|EFQ46182.1| asparagine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 432

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 76/324 (23%), Positives = 118/324 (36%), Gaps = 28/324 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      FE AKS+R E 
Sbjct: 10  SSKHVDQKVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFEAAKSLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G V                 E+    +EI+S  E       G +E+        R
Sbjct: 70  SFYITGTVHEDKRSHF-------GYEIQISDLEIVSNNE---GYPIGNKEHGVDFLLDNR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +  +       E FI+   PI   S+PEG          N  
Sbjct: 120 HLWLRSKRPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNND 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           L+  E  L  + ++    N           +  +R  G D   LR P    N T      
Sbjct: 237 LDIQERYLAYMVKQVLENN-----------EYELRILGRDPEKLR-PTTEGNFTRLPYDD 284

Query: 310 EFRVFSKILSVNPGYEVWAIPAKG 333
             ++  +        + +  P +G
Sbjct: 285 AIKMLQEAGRDIKWGDDFGAPDEG 308



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 52/175 (29%), Gaps = 28/175 (16%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEE 449
           +G+       D +K    A         + G  +            +I+++P        
Sbjct: 274 EGNFTRLPYDDAIKMLQEAGR-DIKWGDDFGAPDEGYISEQFDRPVFIVNYP-------- 324

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                   PF M +      +      I    Y       EI  G  R    E++ +   
Sbjct: 325 ----TTIKPFYMKKNPDNPKEYLCADVIAPEGY------GEIFGGSEREGNYEILKKQIE 374

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             G++ E  +          + G  PH G   G +R +  +    ++RE   FP 
Sbjct: 375 EAGLNLEDYQ----WYLDLRKFGGVPHSGFGMGFERTIAWICKLDHIREAIPFPR 425


>gi|55820868|ref|YP_139310.1| asparaginyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|81820473|sp|Q5M4S8|SYN_STRT2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|55736853|gb|AAV60495.1| asparaginyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
          Length = 448

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 73/365 (20%), Positives = 133/365 (36%), Gaps = 47/365 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
              +G  + +  WV      G I FL +RD       V   P+             F+  
Sbjct: 12  PKHIGEEITIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEEGLEKFDTI 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + + G+V                 EL    IE++  +++ P+     +E+  
Sbjct: 72  KHLSQETSIYVTGMVKEDERSKF-------GYELDITDIEVIGKSQDYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                 R L LR          R  II +         FI+  +PIL++++ E + +   
Sbjct: 122 DFLMDNRHLWLRSRKQMAIQQIRNAIIYATYDFFDKNGFIKFDSPILSSNAAEDSTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S
Sbjct: 182 TDYFGTPAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFE----------EFSNGN------TVSNNFLRICYDDAIRRY 286
           F+  D+ L+  E  ++ + +          E    +       ++  F R+ YD+AI   
Sbjct: 239 FLSHDESLDLQEAYVKALIQGAIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEAIDLL 298

Query: 287 G-------TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
                   TD   L +     +  E ++ + F V + +++    ++ + +    G   R 
Sbjct: 299 QAHENDEDTDYEHLEHGDDFGSPHETWISNYFGVPTFVVNYPASFKAFYMKPVPGNPERV 358

Query: 340 FCDRM 344
            C  +
Sbjct: 359 LCADL 363



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ +   E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDDYDALVAKMEELGMDRSEYE----FYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|194879712|ref|XP_001974286.1| GG21647 [Drosophila erecta]
 gi|190657473|gb|EDV54686.1| GG21647 [Drosophila erecta]
          Length = 558

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 68/349 (19%), Positives = 134/349 (38%), Gaps = 23/349 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G ++  S V++ GWVHR+R  G  +IF+ +RD  G  Q V N        A ++ +E  +
Sbjct: 130 GTANRDSRVKVYGWVHRLRRQGKSLIFITLRDGTGFLQCVLNDQLCQTYDALTLSTESSV 189

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  EL+    E++ +A           E    ++   R +
Sbjct: 190 VLFGTLKLVPEG----KTAPGGHELNVDYWELIGLAPPGGADAILNEEAQPDVQLDNRHI 245

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R+ +  + R    A  + E + P L  +  EG           + ++
Sbjct: 246 MIRGENTSKVLKMRSVVTQAFRAHYEARGYNEVTPPTLVQTQVEGGSTLFKLKYFGEEAY 305

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ----- 246
             L Q+ Q Y +  +       F I+  +R E  R+ R   E+  ++ E +F+       
Sbjct: 306 --LTQSSQLYLETCLP-ALGDVFTISQSYRAEQSRTRRHLAEYSHVEAECAFLTFDDLLD 362

Query: 247 ---DDILNTMENVLR----GVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              D + + ++ VL+     + +E + +       F R+ Y+DAI+    +    ++   
Sbjct: 363 RLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRRMNYEDAIKWLKENNV-TKDDGT 421

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
            +   E    +  R  +  ++       +    K     R   D R+ E
Sbjct: 422 FYEFGEDIPEAPERKMTDTINEPIMLCRFPAEIKSFYMQRCKEDQRLTE 470



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R + SE +L+ ++ 
Sbjct: 449 RFPAEIKSFYMQRCKEDQRLTESVDV-------LLPNVGEIVGGSMRIYDSEELLKGYAR 501

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI  +     +         G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 502 EGIDPKP----YYWYTDQRIYGTMPHGGYGLGLERFLCWLLNRYHIREVCLYPR 551


>gi|194397060|ref|YP_002038174.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|194356727|gb|ACF55175.1| asparaginyl-tRNA synthetase (asnS) [Streptococcus pneumoniae G54]
          Length = 447

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 129/362 (35%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  ++  P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQXYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLT 240

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D+ L+  E  ++   +   +                   ++  F RI YD AI      
Sbjct: 241 HDESLDLQEAYVKAXXQGVXDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEH 300

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++     + + +    G   R  C 
Sbjct: 301 ENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCA 360

Query: 343 RM 344
            +
Sbjct: 361 DL 362



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 338 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 390 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 445

Query: 570 DL 571
             
Sbjct: 446 KP 447


>gi|116202689|ref|XP_001227156.1| hypothetical protein CHGG_09229 [Chaetomium globosum CBS 148.51]
 gi|88177747|gb|EAQ85215.1| hypothetical protein CHGG_09229 [Chaetomium globosum CBS 148.51]
          Length = 618

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/270 (20%), Positives = 109/270 (40%), Gaps = 18/270 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIR---DHYGI----------TQVVANPDSAC 58
           G +     +R++G ++  R  G  +IF D+R   D   I            V  +  +  
Sbjct: 119 GETAENKEIRIAGRIYNKRASGSKLIFYDLRTSADTVSIGTQLQVVCQAQLVKEDSGAPS 178

Query: 59  FEIAKS-VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
           FE     +R   V+ I G     + +   A    G++ + A +I +LS    +   V   
Sbjct: 179 FEKQHENIRRGDVIGIVGYAGRTNPKNRLAEGKEGELSIFATEIVLLSPCLHMLPSVRFP 238

Query: 118 REYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                  R + R+LD L  D   + + +R+R +  +R  +    FIE  TP++ A +   
Sbjct: 239 F-SDGEQRARMRYLDMLWNDKSREVLWQRSRAVRYIREYLHERRFIEVETPMMHAIAGGA 297

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                     +      +  AP+ + + ++   F + F+I   FR+E       P EF  
Sbjct: 298 TALPFTTHHNDLDIDMYMRVAPELFLKKMIVGQFGKVFEIGKNFRNEGIDLTHNP-EFTT 356

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
            +   ++ +  D++   E+++ G+ ++ + 
Sbjct: 357 CEFYWAYADMYDLMELTEDLVSGLVKQLTG 386



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 4/93 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++      EIA+     +        F      K+  ++           A +
Sbjct: 496 KKGLCERFEAFVCKKEIANAYTELNNPFDQRLRFEEQARQKDQGDDEAQLVDESFLNALE 555

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+PP GG   GIDR+ M +    ++REV  FP
Sbjct: 556 YGLPPTGGWGLGIDRLTMFITNNYSIREVLAFP 588


>gi|322700758|gb|EFY92511.1| hypothetical protein MAC_01477 [Metarhizium acridum CQMa 102]
          Length = 545

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 110/604 (18%), Positives = 188/604 (31%), Gaps = 138/604 (22%)

Query: 7   HSCGDLGVSDVGSFV---RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
            +  DL      + V   +L GWV  VR   G+ F+DI D   +  V    D A   +A 
Sbjct: 39  KTVADLRAWHPETNVPDVQLCGWVRSVRKSAGVRFVDITDGSSMRPVQVVIDKA---LAA 95

Query: 64  SVRSEWVLCIDGLVM----------------------------SRSAETINANIITGQIE 95
            +R    +C+ G                               +   E     I T Q E
Sbjct: 96  DIRPGSAVCLKGRWHNSADMKQPNTEGSSVSDISSQHTPSVSGADGMEQGTERIPTIQ-E 154

Query: 96  LSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155
           L   ++++L V++        + + PES+R+    L  R       +  R+     +   
Sbjct: 155 LRVDEVKVLGVSDP-----QNKYQTPESLRY-ISHLRSRTPLNSTLLRLRSDASFILTQF 208

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ---APQQYKQLLMASGFDR 212
              + F +   PI+T+S  EGA +       ++  F+  P+      Q     +A     
Sbjct: 209 FFNQKFQQTHPPIITSSDCEGAGEAFTVKTGSKAEFFRDPKYLTVSTQLHLEALAQSLGN 268

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN 272
            + ++P FR E   +        +  M  + +   + +    N +  + +          
Sbjct: 269 VWTLSPTFRAEQSDTS---RHLSEFYMLEAEMSFVNDM----NEVMDLVQSMLKNLAQGL 321

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
             LR   + A  R      D R+P             E   F+ ++        W     
Sbjct: 322 KGLRAANELAQNRL-----DSRDPA------------ERLAFADLVEQEELDRRWTGLLS 364

Query: 333 GGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
                R       E                      +  + PVA                
Sbjct: 365 PSQWPRIT---YTEA---------------------IERLQPVANQFE------------ 388

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCN-CFEFCWIMDFPFYEWNEEEKK 451
                        P+      ++   ++A+E+G+   N  +   +I  +P      E K 
Sbjct: 389 -----------HKPVWGSGLQSEHEKYLAREVGVDKANSAYLPIFITQYP-----REIKA 432

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSN 510
                +  + PQG                 +DL+     E+A G +R H    +      
Sbjct: 433 FYMLRSASSPPQGETVD------------CFDLLVPSLGELAGGSMREHRLSELEDNMKL 480

Query: 511 VGIS----KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+     K+   +  G      + G PPHGG   G DR++  L G  NVR+V  FP   
Sbjct: 481 HGLEVPGKKQDRSSGLGWYLDLRRWGCPPHGGFGLGFDRLLSYLTGVANVRDVVPFPRHY 540

Query: 567 NFCD 570
             CD
Sbjct: 541 QRCD 544


>gi|302679128|ref|XP_003029246.1| hypothetical protein SCHCODRAFT_69392 [Schizophyllum commune H4-8]
 gi|300102936|gb|EFI94343.1| hypothetical protein SCHCODRAFT_69392 [Schizophyllum commune H4-8]
          Length = 595

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/268 (22%), Positives = 110/268 (41%), Gaps = 18/268 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVAN----PDSACFEIAKS-VR 66
           G    G   R+ G +  +R     + F DI       QV+AN     D A FE      R
Sbjct: 114 GDKLEGREERIVGRIFSMRASSSKLRFYDIHSEGQKVQVMANAQDAEDPAKFEEVHDIFR 173

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ + G  M             G++ ++ + + +L+ +    +P        +  R+
Sbjct: 174 RGDIVGVVGTPMRTKK---------GELSIAPKTMTLLAPSL-HQIPTSHFGLKDQETRY 223

Query: 127 KYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL       K  V R+RI+N +R  +    F+E  TP+ +  +        V   
Sbjct: 224 RKRYLDLIISPNTRKIFVTRSRIVNYIRRFLDNLGFMEVETPMTSMIAGGATAKPFVTHH 283

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            +      L  AP+ Y + L+  G DR ++I   FR+E       P EF   +  M++ +
Sbjct: 284 NDLNLDLFLRIAPELYLKQLVVGGLDRVYEIGRVFRNEGIDLTHNP-EFTICEFYMAYAD 342

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN 273
             D+++  E ++ G+ +  + G T+   
Sbjct: 343 MYDLMDITEAMIEGLVKSLTGGTTLEFY 370



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 7/108 (6%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++    G EI +     +        F      KE  ++   G       A +
Sbjct: 479 RPGLCERFEGFLCGKEICNAYTELNDPFEQRLRFEEQVRQKEAGDDEAQGIDETFVDALE 538

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
            G+PP GG   GIDR+VM L  + N++EV LFP  +    L  G+P  
Sbjct: 539 HGLPPTGGWGIGIDRLVMFLTNSTNIKEVLLFPAMKP---LEQGAPPP 583


>gi|221194541|ref|ZP_03567598.1| lysyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185445|gb|EEE17835.1| lysyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 522

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 68/370 (18%), Positives = 135/370 (36%), Gaps = 42/370 (11%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVR 66
            +L   +      ++G V  +R  G I F+ I D+ G  Q+     N D A +++   + 
Sbjct: 64  ANLENGETEDEYSVAGRVRAIRNQGKIAFVVIEDYTGQLQLFCRINNLDEASWDLLGMLD 123

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++   G VM             GQ+ ++  ++ +LS +   PLP          +R+
Sbjct: 124 LGDIIGATGAVMRTRR---------GQLSIAPTRLVLLSKSLR-PLPEKFHGLTDREVRY 173

Query: 127 KYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R++DL  +   +++ + R++II+ +R  M  + ++E  TP+L            +   
Sbjct: 174 RQRYVDLIMNPEVRDVFRKRSQIISIIRQHMEDDGYMEVETPVLQEILGGANAKPFITHY 233

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   L  A +   + L+  G +R F+I   FR+E       P EF  ++   ++ +
Sbjct: 234 NALNTENYLRIATELPLKRLIVGGLERVFEIGRQFRNEGTDLTHNP-EFTSMEAYAAYSD 292

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
              +    + + + +                      +  +   + DL     M +++E 
Sbjct: 293 LAGMRKLSQELFQDIARRACGCEAG----------HEVITFQGTEIDLSGEWRMASLSEI 342

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN-EWARSQGQPGLAYIFWRLD 364
                    S    V                 R   DR + EW    G   L  +F   D
Sbjct: 343 ASEVTGENLSIDTPVEKL--------------REVLDRFDIEWNVEWGAGKL--LFEIYD 386

Query: 365 ESGNVAGMGP 374
           E G  + + P
Sbjct: 387 ELGEKSIINP 396



 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 71/205 (34%), Gaps = 28/205 (13%)

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           +D SG       +++  + V  E + +   ++                  A      I  
Sbjct: 328 IDLSGEWRMAS-LSEIASEVTGENLSIDTPVEKLREVLDRFDIEWNVEWGAGKLLFEIYD 386

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           ELG    +     ++ D+P               +P T  +     L           ++
Sbjct: 387 ELG--EKSIINPTFVCDYP------------AEVSPLTKRKDDDPRLTD---------RF 423

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGG 538
           +LV  G E A+     +      + F+    +K               RA + GMPP GG
Sbjct: 424 ELVIKGAEYANAYSELNDPVDQEERFAAQMEAKRQGDDEAMEYDYDFIRALEYGMPPAGG 483

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           I  GIDR++ML     ++R+V LFP
Sbjct: 484 IGYGIDRMIMLFCDQPSIRDVLLFP 508


>gi|71984122|ref|NP_001021405.1| asparagiNyl tRNA Synthetase family member (nrs-1) [Caenorhabditis
           elegans]
 gi|2501037|sp|Q19722|SYNC_CAEEL RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|3876241|emb|CAA95808.1| C. elegans protein F22D6.3a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 545

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/300 (19%), Positives = 112/300 (37%), Gaps = 24/300 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
            V      V +  WVHR+R  G  ++FL +RD YG  Q V N        A ++ +E  +
Sbjct: 116 SVQHRDQRVSIKAWVHRLRRQGKSLMFLVLRDGYGFLQCVLNDKLCQSYDAVTLSTETSV 175

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G++ +               EL+    E++  A    +           +    R L
Sbjct: 176 QVYGIIKALPDG----KSAPDGHELTVDYWEVIGKAPAGGIDNVLNESAGVDVMLDNRHL 231

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   + +  R     +MR    A  + E + P L  +  EG           + ++
Sbjct: 232 VIRGENASRILRIRAAATRAMRDHFFAAGYTEVAPPTLVQTQVEGGSTLFGLDYYGEPAY 291

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +   A      + I+  +R E  R+ R   E+  ++ E +F+  D +++
Sbjct: 292 --LTQSSQLYLETCNA-ALGDVYCISQSYRAEKSRTRRHLSEYQHVEAECAFITFDQLMD 348

Query: 252 TMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
            +E ++    +                      +  F R+ Y +AI     +  D+RN +
Sbjct: 349 RIEALVCDTVDRLLADPVTKSLIEFVNPGYKAPARPFKRMPYKEAIEWLQKN--DVRNEM 406



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAF 508
            +       F MP+   ++     +        DL+  G  EI  G +R    + +L AF
Sbjct: 435 NRFPHGIKAFYMPRCADDNELTESV--------DLLMPGVGEIVGGSMRIWKEDQLLAAF 486

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              G+        +       + G  PHGG   G++R +  L    ++R+V L+P 
Sbjct: 487 EKGGLD----SKNYYWYMDQRKYGSVPHGGYGLGLERFICWLTDTNHIRDVCLYPR 538


>gi|116334579|ref|YP_796106.1| asparaginyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|116099926|gb|ABJ65075.1| asparaginyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 463

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/342 (18%), Positives = 118/342 (34%), Gaps = 51/342 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANPDSACFEIAKSVRSEWVLCIDG 75
              V L GWV  VR    + F+++ D   I    +V   D   +     +     + + G
Sbjct: 18  DEVVTLHGWVKTVRGSKRVGFIELSDGSTIKHAQIVMQSDLENYAEMTKLPLSSTIKVVG 77

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            V+               +E+ AQ++ +L  A +   P+  ++   E +R     L  R 
Sbjct: 78  TVVYTPD-------AKQPLEIHAQEV-VLEGASDNDYPLQKKKHSYEYLR-TMAHLRPRT 128

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           +T +     R+    ++   +    F   +TPI+T+S  EGA +    + ++        
Sbjct: 129 NTFYAVFRIRSLAAFAIHQYLQEHGFTYVNTPIITSSDSEGAGEMFRVTTLDMNNLPKTE 188

Query: 190 --------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A      +   P FR E+  + R   EF+ ++
Sbjct: 189 DGRVDDHEDFFKKETNLTVSGQLPVEAFALALRNVYTFGPAFRAENSHTSRHASEFWMIE 248

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            EM+F +  D +N  E +L+ V +   +                       T    F +I
Sbjct: 249 PEMAFADLQDTINEAEGLLKYVVQYLLDHAQDELAFLDSAVDDDLLNRLHQTCDEKFAQI 308

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKI 317
            Y  AI        D   P+   +    EH  +   +V+ + 
Sbjct: 309 TYTQAIEELKKAPVDFDVPVSWGLDLQAEHERYLCEQVYKRP 350



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 4/98 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ N+     A    LV    E+  G  R      + Q   +  +  E  +         
Sbjct: 365 MRDNEDGKTVAAADLLVPRIGELIGGSQREERQAQLAQKIKDYNLPPEEYQ----WYLDL 420

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + G  PH G   G +R++M + G +N+R+V  +P + 
Sbjct: 421 RKYGETPHSGYGIGFERLLMYVTGMENIRDVIPYPRTP 458


>gi|302418328|ref|XP_003006995.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261354597|gb|EEY17025.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 730

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 68/353 (19%), Positives = 143/353 (40%), Gaps = 14/353 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHY-GITQVVANPDSACF 59
           H  +  +  ++    V S V     +H  R     + FL  RD    I  V+++      
Sbjct: 123 HPAKLVTIAEVSSMPVDSVVTFRARIHTQRRMSKHLDFLLFRDQTHTIQGVLSHTHPNMV 182

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+ +  E ++ + G +     + + +   +G +E+S   + ++S A +L    + +  
Sbjct: 183 RWAQHLNPESIVQVTGTLQK-PVQHVRSATHSG-VEISIDTMYLVSPAHDLAFSNY-KAP 239

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                R + R LDLR          R  I  + R  +  +NF+E  TP L  ++ E    
Sbjct: 240 STMHRRLEARVLDLRHPANQALFRVRHTITRTFRESLEKQNFMEMHTPKLQPAATESGAS 299

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               +   + +F A  Q+PQ  KQ+ +++ F R ++I P FR E+  + R   E+  LD+
Sbjct: 300 VFKVNYFGRRAFLA--QSPQLAKQMAISADFGRVYEIGPVFRAENSNTHRHLTEYTGLDL 357

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           EM+   +  +++  ++ VL+ +F   +       + +R  +  +   +  + P +     
Sbjct: 358 EMTIQDDYHELIKILDCVLKDIF--TAAQAMPELDVVRERWPSSPIEWLEETPIIPFAEG 415

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           +  + +     E     + LS      +  +  +    +    D+  + AR  
Sbjct: 416 IQMLRDDGRDVE----EEDLSTRDEIRLGELVKEKYKTDYYILDKFPKSARPF 464



 Score = 43.5 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 46/121 (38%), Gaps = 22/121 (18%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   +  PF   +        +         +D+   G EI +GG R + +  +  +  +
Sbjct: 456 KFPKSARPFYTHKAEDPKWTNS---------FDIFVRGQEICTGGQRINDAAELRASMVD 506

Query: 511 VGISKEVVENRFGGLYRAFQCGMPP-HGGIAAGI---DRIVMLLLG-AKNVR---EVS-L 561
            GIS++ +         AF  G+   H G A G     R+ M++     ++R   EV   
Sbjct: 507 AGISEDDMAE----YLTAFDLGIWRHHTGAAVGYVKQGRLAMVIGDPLCDIRQYAEVIPA 562

Query: 562 F 562
           F
Sbjct: 563 F 563


>gi|118580126|ref|YP_901376.1| asparaginyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|166231670|sp|A1APP8|SYN_PELPD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|118502836|gb|ABK99318.1| asparaginyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 459

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 74/359 (20%), Positives = 132/359 (36%), Gaps = 54/359 (15%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIA 62
           RT     L     G    ++GWV  +R   GI F+ + D   +   QVV    S  F   
Sbjct: 2   RTIIRQLLSQGVSGQTYAIAGWVRSLRISKGIAFIALNDGSNLAGIQVVVEEQSPAFSEI 61

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++ +   L + G +++  A          + EL A+ I I+  ++E   P+  +R   E
Sbjct: 62  DAIATGCSLRVTGTLVASPAAG-------QERELRAESIAIVGTSDENY-PLQKKRHSFE 113

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R +   L  R +T       R+R+  ++       NF+   TPI+TAS  EGA +   
Sbjct: 114 YLR-EIAHLRPRSNTFGAVFRLRSRLAQAIHRFFGDNNFLYVHTPIITASDCEGAGELFR 172

Query: 183 PSRVNQ-------------GSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
            + ++                F+          Q +  L A  F   +   P FR E+  
Sbjct: 173 VTTLDAASPPLLEGRPDFGQDFFGQKTGLTVSGQLEGELFALAFSDIYTFGPTFRAENSN 232

Query: 227 SDRLPGEFYQLDMEM----------------------SFVEQDDILNTM-ENVLRGVFEE 263
           + R   EF+ ++ EM                      +  E  + +      + +G+ E 
Sbjct: 233 TPRHAAEFWMIEPEMAFADLADDAALAEKFVRYLCRFALEECAEEMAFFDRQIEKGLLER 292

Query: 264 FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
                    +F+R+ YD+AI+R          P+   +   TEH  +   ++      +
Sbjct: 293 V--RRVAEADFVRMEYDEAIQRLQRSGVTFSYPVEWGLDLQTEHERYITEKIVGGPAFI 349



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    +V+    + +GI              + + G  PH G   G 
Sbjct: 376 LVPKVGEIIGGSQREERLDVLEARMAELGI----AREPLWWYLESRRWGSCPHAGFGLGF 431

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+VM L G +N+R+V  FP +  
Sbjct: 432 ERLVMYLSGMENIRDVIPFPRTPR 455


>gi|308233555|ref|ZP_07664292.1| asparaginyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943357|ref|ZP_08240822.1| asparagine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491326|gb|EGF23100.1| asparagine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 466

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 115/387 (29%), Gaps = 59/387 (15%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI---TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           + V ++GW+  VR      F+ I D         V+       +    +      L + G
Sbjct: 19  TEVVVAGWLRSVRDMKNFGFVTINDGSCFRDLQVVMQRETLQNYAEIAAQNMGAALIVTG 78

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            +    +            EL A+ I +   ++        ++          + L  R 
Sbjct: 79  TLELTPSR-------PQPFELQAKTIMVEGTSDPDYPMQ--KKRASREFLRTQQHLRART 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           +        R+    ++        F+   TPI+T+S  EGA +    +  +        
Sbjct: 130 NLFRAVFRVRSTAAFAIHKFFQERGFVYVHTPIITSSDAEGAGEMFKVTTFDLAHVPMKD 189

Query: 189 ------GSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+  P +     Q +    A  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 190 GAVDYSQDFFGAPTSLTVSGQLEAENFAMSFGDVYTFGPTFRAENSNTRRHAAEFWMVEP 249

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------------------NFLRIC 278
           EM+F +    ++  E +L+ V     +                           +F R+ 
Sbjct: 250 EMAFCDLKGYMDCAEAMLKYVISYVMDACPYEMELFNKFVDKGLQARLEHVAHSDFARVS 309

Query: 279 YDDAIRRYGT---DKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
           Y DAI           D   P+       TEH  +     F K     P +         
Sbjct: 310 YTDAISILQEAQAQGHDFTYPVSWGVDLQTEHERYLTEEHFKK-----PTFVTDYPAEIK 364

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIF 360
               R   D     A     PG+  I 
Sbjct: 365 AFYMRMNDDDKTVAAADCLVPGIGEII 391



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 48/144 (33%), Gaps = 24/144 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P                 F M          ND     A  
Sbjct: 341 HERYLTEEHFKKPTFVTDYP------------AEIKAFYMRM--------NDDDKTVAAA 380

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    EI  G  R    + + Q   ++G+       ++       + G   H G   
Sbjct: 381 DCLVPGIGEIIGGSQREERLDRLEQRIKDLGMDP----KQYAYYCDLRKYGSCHHAGFGL 436

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +R+VM L G  N+R+V   P +
Sbjct: 437 GFERLVMYLTGVDNIRDVLPHPRT 460


>gi|126459746|ref|YP_001056024.1| asparaginyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126249467|gb|ABO08558.1| asparaginyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 431

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 100/250 (40%), Gaps = 13/250 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + GWV+R R     +FL +RD  G+ Q+V       F  A+S+  E  L   G+++   
Sbjct: 22  TVRGWVYRKRTLKEKVFLLLRDATGVIQLVVPRAK--FPEAESLNLESSLVATGVLVREP 79

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                     G +EL  + I+ + V E  P+                R L LR   +   
Sbjct: 80  R-------APGGVELHVESIDWVYVGEPYPINEDAAV-SDSEYLLDVRHLWLRSRKMQAI 131

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +  R  +  ++        F E   P+   ++ EG          ++  +  L Q+ Q Y
Sbjct: 132 LKIRHTVFGAIHDYFRRRGFYEVHPPMFITAAVEGGATLFKVEYFDRTVY--LTQSSQFY 189

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ S  ++ + +AP FR E  R+ R   EF+  +ME+++   DD     E V+  V 
Sbjct: 190 LEALIYS-LEKVYTVAPSFRAEPSRTRRHLTEFWHAEMEIAWAHMDDAAKVGEEVIGHVV 248

Query: 262 EEFSNGNTVS 271
           E   +     
Sbjct: 249 ERVLDERQDE 258



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 59/154 (38%), Gaps = 15/154 (9%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK-----GNDLLSIKA 479
            ++    F   W  D       +EE+ +    +   +  G  E LK      N       
Sbjct: 286 EVLRKKGFALSWGDDI----GADEERALTLEFDKPIILHGFPEKLKAFYHRNNPQRPEVT 341

Query: 480 FQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
             +D++      E+  GG R + ++ +++     G++ E  +          + G  PH 
Sbjct: 342 LSFDVLLPEGYGEVIGGGERIYDAKELVEKIIRFGLNPEDYQ----WYIDLRRYGSVPHA 397

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   G+DR+VM + GA ++R+V  FP        
Sbjct: 398 GFGLGVDRLVMWIAGADHIRDVVPFPRDIRRTRP 431


>gi|332211189|ref|XP_003254702.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           isoform 1 [Nomascus leucogenys]
          Length = 477

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 113/258 (43%), Gaps = 19/258 (7%)

Query: 12  LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           LG  +  G  +++ GW+  VR    ++FL + D   +  +    DS     ++ +     
Sbjct: 34  LGTQNATGERIKVQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGL--DSRELTFGSS 91

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++   ++  N       +EL A+KI+++   +    P+  +  +P     +Y  
Sbjct: 92  VEVQGQLIKSPSKRQN-------VELKAEKIKVIGNCDAKNFPIKYKERHPLEYLRQYPH 144

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-----R 185
              R + L   +  R+    ++        F+   TPI+T++  EGA +          +
Sbjct: 145 FRCRTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLK 204

Query: 186 VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           +++ +F+   A      Q    +M+  F + F   P FR E+ +S R   EFY ++ E+S
Sbjct: 205 LSEENFFNVPAFLTVSGQLHLEVMSGAFTQVFAFGPTFRAENSQSRRHLAEFYMIEAEIS 264

Query: 243 FVEQ-DDILNTMENVLRG 259
           FV+   D++  +E + + 
Sbjct: 265 FVDSLQDLMQVIEKLFKA 282



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 25/137 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             +++++P             A  PF M                 A   DL+  G  E+ 
Sbjct: 363 PVFVINYPL------------ALKPFYMRDNED------GPQHTVA-AVDLLVPGVGELF 403

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            GG+R      + +  +  G+++      +       + G  PHGG   G +R +  +LG
Sbjct: 404 GGGLREERYHFLEERLARSGLTEV-----YQWYLDLRRFGSVPHGGFGMGFERYLQCILG 458

Query: 553 AKNVREVSLFPMSQNFC 569
             N+++V  FP     C
Sbjct: 459 VDNIKDVIPFPRFPRSC 475


>gi|323342177|ref|ZP_08082410.1| asparagine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464602|gb|EFY09795.1| asparagine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 460

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 52/361 (14%), Positives = 117/361 (32%), Gaps = 44/361 (12%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVLCIDGL 76
            FV+L GWV   R    + F+++ D             D   ++      +   + + GL
Sbjct: 26  EFVQLQGWVRTNRKGKNVGFIELNDGTYFRSAQCVYAADLDNYDEIGKYNTGTAITVTGL 85

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                             E+  +++++             ++ +      +   L +R +
Sbjct: 86  FKVTPDGKQP-------FEIEVKEVKLEGECSSDYPLQ--KKRHSYEYLREIAHLRVRTN 136

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ----GSFY 192
           +       R+ +  ++      + F+   TP++T +  EGA +  V +  +       F+
Sbjct: 137 SFMAVFRVRSVLSMAIHEFFQNQGFVYVHTPVITGNDAEGAGEAFVVTTRDDAKYEKDFF 196

Query: 193 ALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               +     Q      A  F   +   P FR E+  + R   EF+ ++ E++F + +D 
Sbjct: 197 GKKASLTVSGQLHAEAFALAFRDVYTFGPTFRAENSNTARHASEFWMVEPEIAFADLEDN 256

Query: 250 LNTMENVLRGVFEEFSNGNTVSNN---------------------FLRICYDDAIRRYGT 288
           +N +E++++   E                                F R+ Y +A+     
Sbjct: 257 MNLIEDLVKYCIEYVLENAPEEMKFFNERIDTTLLERLNELLSSEFKRMTYTEAVELLEK 316

Query: 289 DKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVN---PGYEVWAIPAKGGGGNRAFCDR 343
                   +       +EH  +    V    + +       + + +     G   A CD 
Sbjct: 317 QNDRFEYKVEWGTDLQSEHERYISEEVVKGPVFITDYPKEIKSFYMRLNEDGKTVAACDL 376

Query: 344 M 344
           +
Sbjct: 377 L 377



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 46/137 (33%), Gaps = 24/137 (17%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             +I D+P     +E K        F M                 A    LV +  E+  
Sbjct: 347 PVFITDYP-----KEIKS-------FYMRLNED--------GKTVAACDLLVPHVGELVG 386

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  R    +V+ +    + I KE +E          + G   H G   G +R +M +   
Sbjct: 387 GSQREERLDVLERRMEELDIPKESLE----WYLDLRRYGGVKHSGFGIGFERFLMYITSM 442

Query: 554 KNVREVSLFPMSQNFCD 570
            N+R+V  F  +    D
Sbjct: 443 TNIRDVVPFARTPRHLD 459


>gi|17551876|ref|NP_499089.1| aspartyl(D) tRNA Synthetase family member (drs-1) [Caenorhabditis
           elegans]
 gi|417839|sp|Q03577|SYDC_CAEEL RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3873792|emb|CAA79536.1| C. elegans protein B0464.1, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 531

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 69/316 (21%), Positives = 122/316 (38%), Gaps = 24/316 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAKSVRSEW 69
           ++ VS+    V + G +H  R  G   FL +R   Y +   +   +    ++ K V S  
Sbjct: 74  EINVSNATKDVWVRGRIHTTRSKGKNCFLVLRQGVYTVQVAMFMNEKISKQMLKFVSSIS 133

Query: 70  VLCIDGLVMSR-SAETINANIITGQIELSAQKIEILSVAEELPLPVF---------GERE 119
              I  +  +    +    +     +EL AQ++ ++S +                  E +
Sbjct: 134 KESIVDVYATINKVDNPIESCTQKDVELLAQQVFVVSTSAPKLPLQIEDASRRAPTDEEK 193

Query: 120 YPE----------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
             E            R   R +DLR  T H     +  I N  R  +    F+E   P +
Sbjct: 194 ASEQENQLAVVNLDTRLDNRVIDLRTPTSHAIFRIQAGICNQFRNILDVRGFVEIMAPKI 253

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
            ++  EG  +    S     ++ A  Q+PQ YKQ+ +A  F++ + I P FR ED  + R
Sbjct: 254 ISAPSEGGANVFEVSYFKGSAYLA--QSPQLYKQMAIAGDFEKVYTIGPVFRAEDSNTHR 311

Query: 230 LPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
              EF  LD+EM+F     +++ T+  VL  +F+            +   Y     ++  
Sbjct: 312 HMTEFVGLDLEMAFNFHYHEVMETIAEVLTQMFKGLQQNYQDEIAAVGNQYPAEPFQFCE 371

Query: 289 DKPDLRNPIIMHNVTE 304
               L+ P  +  + E
Sbjct: 372 PPLILKYPDAITLLRE 387



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   +  PF       +           +  YD+   G EI SG  R H ++++++   +
Sbjct: 423 KFPLSVRPFYTMPDAHDER--------YSNSYDMFMRGEEILSGAQRIHDADMLVERAKH 474

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             +    +++       +F+ G PPH G   G++R+ ML LG  N+R  SLFP       
Sbjct: 475 HQVDLAKIQS----YIDSFKYGCPPHAGGGIGLERVTMLFLGLHNIRLASLFPRDPKRLT 530

Query: 571 L 571
            
Sbjct: 531 P 531


>gi|313665724|ref|YP_004047595.1| lysine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949826|gb|ADR24422.1| lysine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 500

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/289 (18%), Positives = 120/289 (41%), Gaps = 11/289 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFE 60
            +Y+ +S  +L ++     V ++G +   R  G    F++I D     Q+    D    E
Sbjct: 45  EKYKDYSKEEL-LNLTQELVIVAGRIKLYREAGKKAAFVNIDDQDSSIQLYVRLDEIGQE 103

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             +  R   +  I G+      + I      G++ +  +++ +LS A           + 
Sbjct: 104 AFEDFRDLDLGDIIGV------KGIMMRTDHGELSIRCKEVVLLSKALRPLPDKHAGIQD 157

Query: 121 PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            E   ++ R++DL  +  + K    RT+II +M+  +    ++E  TPIL +     +  
Sbjct: 158 IEEK-YRRRYVDLIMNHDVRKTFQARTKIIRTMQNFLDNRGYMEVETPILHSLKGGASAK 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
             V       +   L  A + + + L+  GF+  ++I   FR+E   +   P EF  +++
Sbjct: 217 PFVTHYNVLNTDVYLRIATELHLKRLIVGGFEGVYEIGRIFRNEGMSTRHNP-EFTSIEL 275

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
            +++ +   +++  E + R      ++ + +  N ++I      +R   
Sbjct: 276 YVAYEDMFFLMDLTEEIFRVCNSAVNSSSVIEYNNVKIDLSKPFKRLHM 324



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  I      +  P+      K N        +++L   G E A+     +      + F
Sbjct: 376 ESTIIEPTFVYGHPKEISPLAKSNPNDPRFTDRFELFIIGREYANAFSELNDPIDQYERF 435

Query: 509 SNVGISK----EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +    +   +       A +  MPP  GI  GIDR+VMLL  + ++++V LFP 
Sbjct: 436 KAQLEEESKGNDEANDMDIDFVEALEHAMPPTAGIGIGIDRLVMLLTNSDSIKDVLLFPQ 495

Query: 565 SQ 566
            +
Sbjct: 496 MK 497


>gi|227892517|ref|ZP_04010322.1| asparaginyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227865638|gb|EEJ73059.1| asparaginyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 432

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 72/324 (22%), Positives = 118/324 (36%), Gaps = 28/324 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      FE AKS+R E 
Sbjct: 10  SSKHVDEEVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSDEVFEAAKSLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G V   +             E+    ++++S  E       G +E+       +R
Sbjct: 70  SFYITGTVHEDARSHF-------GYEIQITDLKVISNNE---GYPIGNKEHGIDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +  +       E FI+   PI   S+PEG          +  
Sbjct: 120 HLWLRSKKPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFDHD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           L+  E  L  + ++    N              ++  G D   LR P    N T      
Sbjct: 237 LDLQERYLAYMTKQVLEKNQYE-----------LKILGRDPEKLR-PTTEGNFTRLPYDD 284

Query: 310 EFRVFSKILSVNPGYEVWAIPAKG 333
             ++           + +  P +G
Sbjct: 285 AVKMLQDAGRDFKWGDDFGAPDEG 308



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 38/113 (33%), Gaps = 10/113 (8%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
              +  PF M +      +      I    Y       EI  G  R    E++ Q   + 
Sbjct: 323 YPTSIKPFYMKKNPDNPKEYLCADVIAPEGY------GEIFGGSEREGNYEILKQQIEDA 376

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G++ E  +          + G  PH G   G +R +  +    ++RE   FP 
Sbjct: 377 GLNLEDYQ----WYLDLRKFGGVPHSGFGMGFERTIAWICHLDHIREAIPFPR 425


>gi|168009856|ref|XP_001757621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691315|gb|EDQ77678.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 501

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 120/384 (31%), Gaps = 62/384 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCID 74
           VG  + + GWV   R      F+++ D   ++ +      D   ++  ++ +        
Sbjct: 41  VGETMVVRGWVRTCRIQKTFSFIEVNDGSAVSNLQTVVLSDVEGYDKIEAGQVN-----T 95

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G  ++     + +     ++EL A K+ ++   +    P+  ++   E +R     L  R
Sbjct: 96  GASVAVEGVLVESKGAKQKVELKATKLTLIGGTDPASFPIQKKKLTREYLR-SVAHLRPR 154

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------ 188
            +T       RT +  +       + F+  ++PI+TAS  EGA +    + +        
Sbjct: 155 TNTFGAVARVRTALAYATHQFFREQGFVWVASPIITASDCEGAGEQFCVTTLIPSSHEDT 214

Query: 189 ------------------GSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
                               F+  P       Q      A+     +   P FR E+  +
Sbjct: 215 KTPVSQVPTTKDGLIDWSQDFFGKPAFLTVSGQLNGETYATALCDIYTFGPTFRAENSNT 274

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV----------------- 270
            R   EF+ ++ E++F +  D +      L+ V     +                     
Sbjct: 275 TRHLAEFWMIEPELAFADLKDDMACATAYLQYVVRYVLDNCMEDLEFFNQWVEKGIITRL 334

Query: 271 ----SNNFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPGY 324
                  F+ + Y +A+      K     P+       +EH  +     FS     NP  
Sbjct: 335 TNVVEKPFVHVTYTEAVELLQKSKKKFEFPVKWGADLQSEHERYLTEVAFSG----NPVI 390

Query: 325 EVWAIPAKGGGGNRAFCDRMNEWA 348
                        R   D     A
Sbjct: 391 VTDYPKEIKAFYMRQNEDEKTVAA 414



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 50/138 (36%), Gaps = 24/138 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
               + D+P     +E K        F M Q   E           A    LV    E+ 
Sbjct: 387 NPVIVTDYP-----KEIK-------AFYMRQNEDE--------KTVAAMDILVPRVGELI 426

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    EV+ +    +G+SK      +       + G  PH G   G +R+V    G
Sbjct: 427 GGSQREERLEVLERRIEELGLSK----ESYWWYLDLRRYGSVPHAGFGLGFERLVQFSTG 482

Query: 553 AKNVREVSLFPMSQNFCD 570
            +N+R+V  FP + N  +
Sbjct: 483 IENIRDVIPFPRTPNSAE 500


>gi|123447017|ref|XP_001312254.1| lysyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
 gi|121894094|gb|EAX99324.1| lysyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
          Length = 605

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 57/322 (17%), Positives = 125/322 (38%), Gaps = 16/322 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G       V ++  + ++R HG + F ++ +     Q++    S  ++ AK         
Sbjct: 132 GEELPDVKVSVASRIAQLRAHGNLYFFEMYESTFKLQLMCRSQSY-YDGAKFKEEVSSFH 190

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           +  +V    AE   A   TG++ +   K+ +L+        +   +     +R++ RF D
Sbjct: 191 LGDIV---GAEGFPARSKTGELSVVVTKLVLLA---PCLFQMPKHKLEDLEVRYRQRFFD 244

Query: 133 LRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +    +    R +++  +R  +   +F E  TPI+  ++    A+ F+         
Sbjct: 245 LIVNRENRQIFETRCKVVKMIRGFLDDLDFTEVETPIMWKTAGGATAKPFITHHNALDID 304

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + L  AP+ + ++L+  G +R +++   FR+E       P EF   +  M++ + +D++
Sbjct: 305 LW-LRVAPELFLKMLVVGGMNRVYELGKQFRNEGIDLTHNP-EFTSCEFYMAYADYNDLM 362

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           +  E + + +  E       S     I         G  + D  +P    ++ E      
Sbjct: 363 DLTEKLYQKIVMEVKGTLKFS-----INVQKEDGTIGQQEIDFSSPWQRIDMIEELEKQI 417

Query: 311 FRVFSKILSVNPGYEVWAIPAK 332
              F  +   +   E+     K
Sbjct: 418 NFKFPPLEDTDEVRELLEKKCK 439



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 4/94 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMPP 535
            ++++  NG E A+     +   V  + F +   +K   ++           A +  +PP
Sbjct: 495 ERFEVFINGLEYANAYTELNCPMVQRELFLDQLKAKAAKDDEAMPYDDTFCTALEYALPP 554

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G   G+DR+VMLL    ++REV LFP+ +   
Sbjct: 555 TAGWGCGVDRLVMLLTNQVSIREVLLFPLMKPAA 588


>gi|168217437|ref|ZP_02643062.1| aspartyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182380537|gb|EDT78016.1| aspartyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 429

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 15/251 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            + +   V + GW++++R    I F+ IRD  G+ Q VA  + +      ++  E V+ I
Sbjct: 10  KNHLNENVCIKGWIYKIRRLKFITFIIIRDRSGLVQCVAENEKS---DLSNLTVESVVSI 66

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYPESIRFKYRFL 131
           +G +        +        E+  + IEI++ A+E       +   +         R L
Sbjct: 67  EGALKESKNSLNS-------FEIQVENIEIINKAKEELKIEVNKETLDINLDTMLNNRML 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR   ++     +  I +S R  +  E F E  TP +     EG  +          ++
Sbjct: 120 SLRHKKINSIFKVQNIITDSFREFLNKEGFTEIHTPKIVKEGAEGGTEVFEVKYFENKAY 179

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DIL 250
            A  Q+PQ YKQ+++ +GF+R F+I   +R E+  ++R   E+  +D+EM F+E + DI+
Sbjct: 180 LA--QSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYVSMDLEMGFIENEFDIM 237

Query: 251 NTMENVLRGVF 261
           N  EN+L+ + 
Sbjct: 238 NLEENLLKFIL 248



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 6/127 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            Y++ +E+   DF     T        +            +DL+  G EI +GG R H  
Sbjct: 306 LYKYAKEKLNSDFLFL--TNYPRKKRPMYTMPKGEKGTHSFDLLFRGIEITTGGQRIHDY 363

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E++++     G++    E+        F+ GMP HGG+A G++RI   +LG +NVRE +L
Sbjct: 364 EMLVENMKYKGLNPNSYES----YLELFKLGMPKHGGLAIGLERITARILGLENVREATL 419

Query: 562 FPMSQNF 568
               +  
Sbjct: 420 ITRDRKR 426


>gi|302698377|ref|XP_003038867.1| hypothetical protein SCHCODRAFT_73634 [Schizophyllum commune H4-8]
 gi|300112564|gb|EFJ03965.1| hypothetical protein SCHCODRAFT_73634 [Schizophyllum commune H4-8]
          Length = 944

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/353 (17%), Positives = 126/353 (35%), Gaps = 15/353 (4%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFE-----IAKSV 65
           +    +G  +     +H  R     + F   R      Q V     +  E      ++ +
Sbjct: 19  VSSQSIGQDITFRARLHARRNMSSHLAFFVFRQGMTTLQGVLEERESETEPLFIAWSEHI 78

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           + E +L + G + +       A++    +EL  +++ I+S           +    +  R
Sbjct: 79  QPEAILQVTGTLKTPKVTVKYASLH--DVELQIKEMHIVSEPTVSLPFRPYQVNASDHTR 136

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            ++R +DLR    +        +    R  +    FIE  +P L  S+ E          
Sbjct: 137 LEHRVIDLRTPPSNALFRLNAAVCRYFRNYLDDHGFIEIHSPKLQGSATESGSSVFPVEY 196

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             + +F A  Q+PQ  KQ+ +++   R F+I P FR E+  + R   E+  LD+EM+F  
Sbjct: 197 FGRKAFLA--QSPQLAKQMAISADMGRVFEIGPVFRAENSNTHRHLTEYTGLDIEMAFQH 254

Query: 246 Q-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
              + +  M ++L+ +F+     N      L+  +      +  + P +     +  + E
Sbjct: 255 HYHETMYLMIDLLKNIFKNVYEHNRPQIEVLKQAFPHDDLVWTEETPVIPFKEGIRMLKE 314

Query: 305 HFVHSEFRVF----SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
                +  V        L       +  +  +    +    D+    AR    
Sbjct: 315 SGWEGDVSVIFPTEDDDLGTRDEIRLGELVKEKYHTDFYVLDKFPVAARPFYA 367



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 62/190 (32%), Gaps = 29/190 (15%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
           +       +      +   S  F   D           R+ I   LG +    +      
Sbjct: 303 IPFKEGIRMLKESGWEGDVSVIFPTEDDD------LGTRDEI--RLGELVKEKYH----T 350

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           DF   +      K   A  PF                      +D+   G EI +GG R 
Sbjct: 351 DFYVLD------KFPVAARPFYAMLD--------PKDKRFTNSFDMFIRGQEIMTGGQRI 396

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
           H    +L+   + G+             +AF+ G PPH G   G++RI+ML+    N+R 
Sbjct: 397 HEPAALLRRMRDAGVVPAGSLEE---YMKAFEWGCPPHAGAGVGLERILMLMFKLGNIRF 453

Query: 559 VSLFPMSQNF 568
            S+FP     
Sbjct: 454 ASMFPRDPKS 463


>gi|238854245|ref|ZP_04644589.1| asparagine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238833056|gb|EEQ25349.1| asparagine--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 432

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 76/324 (23%), Positives = 118/324 (36%), Gaps = 28/324 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      FE AKS+R E 
Sbjct: 10  SSKHVDQKVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFEAAKSLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G V                 E+    +EI+S  E       G +E+        R
Sbjct: 70  SFYITGTVHEDKRSHF-------GYEIQISDLEIVSNNE---GYPIGNKEHGVDFLLDNR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +  +       E FI+   PI   S+PEG          N  
Sbjct: 120 HLWLRSKRPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNND 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           L+  E  L  + ++    N           +  +R  G D   LR P    N T      
Sbjct: 237 LDIQERYLAYMVKQVLENN-----------EYELRILGRDPEKLR-PTTEGNFTRLPYDD 284

Query: 310 EFRVFSKILSVNPGYEVWAIPAKG 333
             ++  +        + +  P +G
Sbjct: 285 AIKMLQEAGRDIKWGDDFGAPDEG 308



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 52/175 (29%), Gaps = 28/175 (16%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEE 449
           +G+       D +K    A         + G  +            +I+++P        
Sbjct: 274 EGNFTRLPYDDAIKMLQEAGR-DIKWGDDFGAPDEGYISEQFDRPVFIVNYP-------- 324

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                   PF M +      +      I    Y       EI  G  R    E++ +   
Sbjct: 325 ----TTIKPFYMKKNHDNPKEYLCADVIAPEGY------GEIFGGSEREGNYEILKKQIE 374

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             G++ E  +          + G  PH G   G +R +  +    ++RE   FP 
Sbjct: 375 EAGLNLEDYQ----WYLDLRKFGGVPHSGFGMGFERTIAWICKLDHIREAIPFPR 425


>gi|94676681|ref|YP_588851.1| asparaginyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|122988112|sp|Q1LT63|SYN_BAUCH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|94219831|gb|ABF13990.1| asparaginyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 467

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 74/384 (19%), Positives = 129/384 (33%), Gaps = 54/384 (14%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            V + GWV   R    GI FL I D   +   QV+ N D   +      +S+ +    G 
Sbjct: 20  EVIVQGWVRTRRDSKAGISFLSIYDGSCLDSLQVIINHDLPNY------KSDVLHLTTGC 73

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            +  +   + +  +    E+ A+ I++L   +         +++      +   L  R +
Sbjct: 74  SVVITGSIVTSIGVGQHFEIQAKNIKVLGWVKNPETYPITAKKHSLEFLREVAHLRPRTN 133

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--------- 187
            +      R  +  ++   M  E F   STP++T  + EGA +    S ++         
Sbjct: 134 IIGAVTRVRHTLAQAIHRFMHIEGFFWVSTPLITTFNCEGAGEMFRVSTLDLENLPYTSK 193

Query: 188 -----QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                +  F+   A      Q      A    + +   P FR E+  + R   EF+ ++ 
Sbjct: 194 GKINYEKDFFGKEAFLTVSGQLNGESYACALSKIYTFGPTFRAENSNTSRHLAEFWMVEP 253

Query: 240 EMSFVEQDDILNTMENVLRGVF-----EEFSNGNTV----------------SNNFLRIC 278
           E++F    DI    E +L+ +F     E   + N                  S+NF +I 
Sbjct: 254 EVAFANLTDIAILAEKMLKYIFNAILIERVDDINFFAEQINKNIIKRLEQFISSNFAQID 313

Query: 279 YDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
           Y +AI      K    + +   M    EH  +   + F       P              
Sbjct: 314 YTEAIDILQNCKQKFDHTVFWGMDLFAEHERYLADKHFQA-----PVVVTNYPKDIKAFY 368

Query: 337 NRAFCDRMNEWARSQGQPGLAYIF 360
            R   D     A     PG+  I 
Sbjct: 369 MRINDDGKTVAAMDVLAPGIGEII 392



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 26/151 (17%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
                E  + + +      + ++P        K I      F M          ND    
Sbjct: 338 LFAEHERYLADKHFQAPVVVTNYP--------KDIKA----FYMRI--------NDDGKT 377

Query: 478 KAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
            A   D++  G  EI  G  R      + Q  ++ G++   +E+ +         G  PH
Sbjct: 378 VA-AMDVLAPGIGEIIGGSQREERLAKLDQRLADRGLN---IEDYW-WYRDLRSYGTVPH 432

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G   G++R+++ + G  N+R+V  FP +  
Sbjct: 433 SGFGLGLERLMIYITGMHNIRDVIPFPRNPR 463


>gi|319776760|ref|YP_004136411.1| lysyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318037835|gb|ADV34034.1| Lysyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 488

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/325 (20%), Positives = 126/325 (38%), Gaps = 35/325 (10%)

Query: 13  GVSDVGSFVR--LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSE 68
                   V+  +SG +   R      FL ++D  G  QV  N        +I ++    
Sbjct: 50  REELEAKKVKKNISGRLITARGP----FLVLKDRKGTIQVYFNKKENPELTKIVETFDLG 105

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            +L + GL+M            TG++ + AQ I++L+ A + PLP           R+++
Sbjct: 106 DILWVRGLLM---------KTHTGEMTVRAQDIQLLTKALK-PLPDKFHGLTDTEERYRH 155

Query: 129 RFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R+LDL  +   +N  + RT+I+  +R      +++E  TP L       A         +
Sbjct: 156 RYLDLITNPESRNTFIMRTKIVQWIRDYFNKLDYLEAETPFLHDYLSGAAAKPFTTHHNS 215

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               + L  A +   + L+  GF+R +++   FR+E   +   P EF  ++   ++   +
Sbjct: 216 LNQDFVLRIATEIPLKKLVVGGFERVYEMGRIFRNEGYDTTHNP-EFTTIEFYEAYSNVE 274

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
            ++N  E +++ + ++      V+N                 + DL  P    N+ +   
Sbjct: 275 GMMNRTETLIKELCKKIGKSKFVTN---------------GVEVDLSKPFKRVNMIDEVS 319

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAK 332
               + F KI          A   K
Sbjct: 320 KKTGKNFRKITLEEAIEVAKAYKIK 344



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 56/161 (34%), Gaps = 7/161 (4%)

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
             F     +    +A+   I     F    I++   YE   E   I          +   
Sbjct: 324 KNFRKITLEEAIEVAKAYKIKIEKFFTIGHIINA-LYEELVEPTLIQPTFLYGHPIEISP 382

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS----NVGISKEVVENRF 522
            S K +D       + +L  N  E A+           L+ F           +   +  
Sbjct: 383 LSAKSDDPR--FTERAELFINTKEYANMYTELSDPIDQLERFESQLEEKNKGNDEASDID 440

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                A + GMPP GG   GIDR+VMLL    ++R+V LFP
Sbjct: 441 YDFVDALEYGMPPTGGCGIGIDRLVMLLTETDSIRDVLLFP 481


>gi|238810135|dbj|BAH69925.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 508

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/325 (20%), Positives = 126/325 (38%), Gaps = 35/325 (10%)

Query: 13  GVSDVGSFVR--LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSE 68
                   V+  +SG +   R      FL ++D  G  QV  N        +I ++    
Sbjct: 70  REELEAKKVKKNISGRLITARGP----FLVLKDRKGTIQVYFNKKENPELTKIVETFDLG 125

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            +L + GL+M            TG++ + AQ I++L+ A + PLP           R+++
Sbjct: 126 DILWVRGLLM---------KTHTGEMTVRAQDIQLLTKALK-PLPDKFHGLTDTEERYRH 175

Query: 129 RFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R+LDL  +   +N  + RT+I+  +R      +++E  TP L       A         +
Sbjct: 176 RYLDLITNPESRNTFIMRTKIVQWIRDYFNKLDYLEAETPFLHDYLSGAAAKPFTTHHNS 235

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               + L  A +   + L+  GF+R +++   FR+E   +   P EF  ++   ++   +
Sbjct: 236 LNQDFVLRIATEIPLKKLVVGGFERVYEMGRIFRNEGYDTTHNP-EFTTIEFYEAYSNVE 294

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
            ++N  E +++ + ++      V+N                 + DL  P    N+ +   
Sbjct: 295 GMMNRTETLIKELCKKIGKSKFVTN---------------GVEVDLSKPFKRVNMIDEVS 339

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAK 332
               + F KI          A   K
Sbjct: 340 KKTGKNFRKITLEEAIEVAKAYKIK 364



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 56/161 (34%), Gaps = 7/161 (4%)

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
             F     +    +A+   I     F    I++   YE   E   I          +   
Sbjct: 344 KNFRKITLEEAIEVAKAYKIKIEKFFTIGHIINA-LYEELVEPTLIQPTFLYGHPIEISP 402

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS----NVGISKEVVENRF 522
            S K +D       + +L  N  E A+           L+ F           +   +  
Sbjct: 403 LSAKSDDPR--FTERAELFINTKEYANMYTELSDPIDQLERFESQLEEKNKGNDEASDID 460

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                A + GMPP GG   GIDR+VMLL    ++R+V LFP
Sbjct: 461 YDFVDALEYGMPPTGGCGIGIDRLVMLLTETDSIRDVLLFP 501


>gi|156547524|ref|XP_001606841.1| PREDICTED: similar to BcDNA.GH06451 [Nasonia vitripennis]
          Length = 555

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/348 (18%), Positives = 127/348 (36%), Gaps = 23/348 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            +     V++ GWVHR+R  G  ++F+ +RD  G  Q + N        A  + +E  + 
Sbjct: 128 KNHKEQRVQIFGWVHRLRRQGKAMMFITLRDGTGFLQCILNDKLCQTYDAVVLNTEASVH 187

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G +              G +EL     +++  +           E    ++   R + 
Sbjct: 188 IFGTLKPVPEG----KTAPGGLELLVDYWKLIGNSPPGGADGILNEEAHPDVQLDNRHIM 243

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +   + ++ R+ +  + R       + E + P L  +  EG       +   + ++ 
Sbjct: 244 IRGENTSRILIMRSVLTQAFRDHYKDRGYCEVTPPTLVQTQVEGGSTLFKLNYFGEEAY- 302

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ------ 246
            L Q+ Q Y +  +       + IA  +R E  R+ R   E+  ++ E  F+        
Sbjct: 303 -LTQSSQLYLETCIP-AMGDVYCIAQSYRAEQSRTRRHLAEYTHIEAECPFITFDDLLDR 360

Query: 247 --DDILNTMENVLRG----VFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             D I + ++ VL+     + +E + N       F R+ Y +AI  Y  +    ++    
Sbjct: 361 LEDLICDVVDRVLQSPMGPLVKELNPNFQVPKRPFRRMNYSEAIE-YLKENNITKDDGSF 419

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
           +   E       R  +  ++       +    K     R   D R+ E
Sbjct: 420 YEFGEDIPEMPERKMTDKINEPIMLCRFPAEIKSFYMQRCEEDNRLTE 467



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   ++     +         L+ N  EI  G +R    + +L+ + +
Sbjct: 446 RFPAEIKSFYMQRCEEDNRLTESVDV-------LLPNVGEIVGGSMRIWDHDALLEGYKS 498

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           VGI        +       + G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 499 VGIDPAP----YYWYTDQRKYGTCPHGGYGLGLERFICWLLNRYHIREVCLYPR 548


>gi|254385093|ref|ZP_05000426.1| aspartyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194343971|gb|EDX24937.1| aspartyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 413

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 76/308 (24%), Positives = 136/308 (44%), Gaps = 31/308 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-IAKSVRS 67
             DL  + V   V +SGWV+ +R    + F+ +RDH G+ QV    +    E + +S+  
Sbjct: 10  VSDLR-AHVDQTVIVSGWVNALRLQRKMQFVILRDHSGMAQVTHKRNGGPLEAVIESLTP 68

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           E  + I G V+        A +  G +EL  + IE+L++AE        +       R  
Sbjct: 69  ESAVRITGRVVEA------AQVNLGGLELVPETIEVLNLAETPLPI---DENTGPEHRLD 119

Query: 128 YRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           +RFLD+R+    + +   +T +   +R   +     E  TP L  ++ E   +       
Sbjct: 120 WRFLDVRKRASAQMVFAAQTTLEQGLREYAMQNGCTEMHTPKLMGTASESGAEVFKLGYF 179

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           ++ ++ A  Q+PQ YKQ+ +A+G DR F+I P FR E   + R   EF  +D+E+S+++ 
Sbjct: 180 DRSAYLA--QSPQFYKQMAVAAGIDRVFEIGPVFRAEPSYTSRHATEFTGVDVELSWIDD 237

Query: 247 -DDILNTMENVLRGVFEEFSNGN-------------TVSNNFLRICYDDAIRRY---GTD 289
            +D++   E +L     + +  +                  F RI   +A       G D
Sbjct: 238 VEDVMAFEERMLAHAIAKVAEVHGEAIREVFGIEVVAPEAPFPRITMAEAQEILRAGGWD 297

Query: 290 KPDLRNPI 297
              ++  +
Sbjct: 298 PEGVKEDL 305



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 24/116 (20%)

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
             EF +I  +P             +  PF   +                  +DL+  G E
Sbjct: 322 GHEFVFITHYP------------ASIRPFYHMRPADRPDL--------TLSFDLLWKGLE 361

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           I +G  R H S+V+L+      +  E +++        F+ G PPHGG+ AG+ RI
Sbjct: 362 ITTGAQREHRSDVLLKQVEEKSMDTEPMQD----YMNIFRFGCPPHGGLGAGLGRI 413


>gi|302828810|ref|XP_002945972.1| hypothetical protein VOLCADRAFT_72624 [Volvox carteri f.
           nagariensis]
 gi|300268787|gb|EFJ52967.1| hypothetical protein VOLCADRAFT_72624 [Volvox carteri f.
           nagariensis]
          Length = 545

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 69/274 (25%), Positives = 106/274 (38%), Gaps = 27/274 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-----CFEIAKSVR 66
           LG       V +   VH  R  G   FL +R      Q V   D         + A  + 
Sbjct: 91  LGKDLSEQKVLVRARVHTTRGKGKSAFLVLRQRTATVQAVLFADDVTVSKGMVKYATQIP 150

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES--- 123
            E ++ ++G+V          +     +EL    I  +S A  LP  +       E    
Sbjct: 151 KESIVDLEGVVKVPEKPIEGCSQK--DVELQVTGIRTVSRAATLPFELVDASRSEEEVKA 208

Query: 124 --------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                         +R   RFLDLR          ++ +    +  ++AE F E  TP L
Sbjct: 209 AAERGEILPTVGQDLRLDNRFLDLRTPANQAIFRVQSAVCQIFKNTLLAEGFQEIHTPKL 268

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
            A + EG            G    L Q+PQ YKQ+ + + FDR F++ P FR E   + R
Sbjct: 269 IAGASEGGAAVFRLDY--MGVPACLAQSPQLYKQMAICADFDRVFEVGPVFRAEFSYTHR 326

Query: 230 LPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFE 262
              EF  LD+EM+  E   ++L+ +E +   +F+
Sbjct: 327 HLCEFMGLDLEMAIHEHYFEVLDVIEKLFAAIFD 360



 Score =  114 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 26/198 (13%)

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
           +A+           +RL   +G +     G P        D    + + LG I    +  
Sbjct: 373 IAQQYPFDVPTFKPLRLTFPEGIALLQQGGYPEV--DPLGDLNTELERALGKIVKEKYG- 429

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
               DF          +   A  PF TMP     +          +  YD+   G EI S
Sbjct: 430 ---TDFFILH------RYPSAVRPFYTMPCADDPTY---------SNSYDVFIRGEEIIS 471

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  R H +E++ +  +  GI  + +++       +F+ G PPHGG   G++R+VML  G 
Sbjct: 472 GAQRVHDAELLTERATACGIPLDTIQS----YIDSFKLGAPPHGGAGVGLERVVMLYCGL 527

Query: 554 KNVREVSLFPMSQNFCDL 571
            N+R+ S+FP        
Sbjct: 528 NNIRKTSMFPRDPKRLTP 545


>gi|58337447|ref|YP_194032.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|58254764|gb|AAV43001.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
          Length = 414

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/323 (22%), Positives = 120/323 (37%), Gaps = 34/323 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      F+ AKS+R E 
Sbjct: 10  SSKHVDEEVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVTDEVFQAAKSLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G V   +             E+    ++++S  E       G +E+       +R
Sbjct: 70  SFYITGTVHEDARSHF-------GYEIQITNLKVVSNNE---GYPIGNKEHGVDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +  +       E FI+   PI   S+PEG          N  
Sbjct: 120 HLWLRSKKPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNND 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDL 293
           L+  E  L  + ++  + N                    NF R+ YDDAI+       D+
Sbjct: 237 LDIQERYLAYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFTRLSYDDAIKMLQDAGRDI 296

Query: 294 RNPIIMH--NVTEHFVHSEFRVF 314
           +        +        +  VF
Sbjct: 297 KWGDDFGAPDEGYISEQYDRPVF 319



 Score = 45.4 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 46/160 (28%), Gaps = 28/160 (17%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEE 449
           +G+       D +K    A         + G  +            +I+++P        
Sbjct: 274 EGNFTRLSYDDAIKMLQDAGR-DIKWGDDFGAPDEGYISEQYDRPVFIVNYP-------- 324

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                +  PF M +      +      I    Y       EI  G  R    EV+ Q   
Sbjct: 325 ----TSIKPFYMKKNPDNPKEYLCADVIAPEGY------GEIFGGSEREGNYEVLNQQIE 374

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           + G+  E  +          + G  PH G   G +R   L
Sbjct: 375 DAGLDLEDYQ----WYLDLRKFGGVPHSGFGMGFERTYCL 410


>gi|301633224|gb|ADK86778.1| asparagine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 455

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 109/274 (39%), Gaps = 19/274 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCID 74
              ++L+GW+   R    IIFL++ D   +  + A         F +A+S+     + + 
Sbjct: 18  NKKIKLTGWLKNKRTSANIIFLEVNDGSTLLNLQAVVKQDQPELFALAESISLASAVSVS 77

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V                +EL  ++I +LS A         ++E+         +L +R
Sbjct: 78  GTVALTPKSKQP-------LELVVKQINVLSTARADYPLQ--KKEHSLEFFRNNAYLRVR 128

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA- 193
             T    +  R+ +  ++       +F+   +PILT++  EGA +      + QG  +  
Sbjct: 129 ARTYFAIMKVRSLLSQAIFDYFFKNDFVLVHSPILTSNDCEGAGETFE---LKQGKEFFN 185

Query: 194 ---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                    Q+     A  F + F   P FR E   + R   EF+ ++ E++F    D++
Sbjct: 186 KTTYLTVSGQFGAECYAQAFKKVFTFGPTFRAEKSHTSRHLSEFWMIEPEVAFANLKDLI 245

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
             +E+ ++ V ++         +FL   +D  + 
Sbjct: 246 KLIESTVKTVIKQVMQKAKQELDFLEKQFDVKLM 279



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 50/366 (13%), Positives = 110/366 (30%), Gaps = 62/366 (16%)

Query: 230 LPGEFYQLDMEMSFV--EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
              EF++ +  +         I+     + + +F+ F   + V  +   +  +D      
Sbjct: 114 HSLEFFRNNAYLRVRARTYFAIMKVRSLLSQAIFDYFFKNDFVLVHSPILTSNDCEG--A 171

Query: 288 TDKPDLRNPIIMHNVTEHFVHSE-------FRVFSKILSVNPGYE------------VWA 328
            +  +L+      N T +   S         + F K+ +  P +              W 
Sbjct: 172 GETFELKQGKEFFNKTTYLTVSGQFGAECYAQAFKKVFTFGPTFRAEKSHTSRHLSEFWM 231

Query: 329 IPAKGGGGNRAFCDRMNE--------WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
           I  +    N     ++ E            + +  L ++  + D    +  +  +    N
Sbjct: 232 IEPEVAFANLKDLIKLIESTVKTVIKQVMQKAKQELDFLEKQFD-VKLMERLKQITSTKN 290

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE-FCWIMD 439
               E I+    ++   +         +   F          E  +   +      ++++
Sbjct: 291 FHVLEYIKALEILK---TAQASGQANFEVQDFNFGLDLKTEHERFLCEQHFHNQPVFVIN 347

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRN 498
           +P        K +      F M Q         D  ++ A   DL+     EI  G  R 
Sbjct: 348 YP--------KDLKA----FYMKQNA-------DGRTVGAV--DLLFPQIGEICGGSERE 386

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              E +++    + I  +             + G     G   G DR++  + G +N+R+
Sbjct: 387 GNLEKLVERCQAMQIDTQT----LNWYLDMRKWGYFASAGFGLGFDRLLAYICGLENIRD 442

Query: 559 VSLFPM 564
              FP 
Sbjct: 443 AIPFPR 448


>gi|331213317|ref|XP_003319340.1| lysyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309298330|gb|EFP74921.1| lysyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 563

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 58/353 (16%), Positives = 122/353 (34%), Gaps = 31/353 (8%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVAN----PDSACFEIAKS-VRSEWVLCI 73
            + L+G +H +R  G  + F D+       Q++A+     +   FE      R   ++ +
Sbjct: 134 QISLAGRIHNMRQAGSKLRFYDLHGEGEKIQIMASSNDSKEPNNFEATHDIFRRGDIVGV 193

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------------YP 121
            G           +    G++ +S + + +LS                            
Sbjct: 194 TG---------FPSRTKKGELSISPRSMILLSPNLHQLPRAETTITTEAGTTESKFGFKD 244

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           +  R + R+LDL  +   ++  + R R+IN +R  +    F+E  TP++   +       
Sbjct: 245 QEQRHRKRYLDLIMNKEVRDVFITRARVINHVRRFLDDLGFLEVETPMMNMIAGGATAKP 304

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +    + G    L  AP+ Y + L+  G DR ++I   FR+E       P EF   +  
Sbjct: 305 FITHHNSLGLDLFLRIAPELYLKELVVGGLDRVYEIGRVFRNESIDLTHNP-EFSICEFY 363

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI--I 298
           M++ +  D++   E +L G+  + +NG+            + +       P  R  +   
Sbjct: 364 MAYADMYDLMQLTEAMLSGLVHKLNNGSYKIKYHPEGPNSEKVYELDFSPPWKRFNMIEE 423

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           +    +    +      K        ++           R     +++     
Sbjct: 424 LEKQLKVKFPTGKDFEDKEKITKFLDDLCVKHNVDCPAPRTNSRLLDKLVGEY 476



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 4/83 (4%)

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGI 543
           G  I +     +      + F      K   ++   G       A + G+PP GG   GI
Sbjct: 474 GEYIENQYTELNDPFDQRERFEEQTRQKAAGDDEAQGIDETFIDALEHGLPPTGGWGLGI 533

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR+VMLL  + +++EV  FP ++
Sbjct: 534 DRLVMLLTDSNSIKEVLCFPANK 556


>gi|281492440|ref|YP_003354420.1| asparaginyl-tRNa synthetase [Lactococcus lactis subsp. lactis
           KF147]
 gi|281376104|gb|ADA65595.1| Asparaginyl-tRNA synthetase [Lactococcus lactis subsp. lactis
           KF147]
          Length = 447

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/365 (20%), Positives = 131/365 (35%), Gaps = 47/365 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-----------NPDSACFEIA 62
              VG  V++  WV      G + FL +RD     Q V               +A F+  
Sbjct: 11  KDHVGETVKIGAWVADKSGKGKLQFLQLRDGTAFFQAVVFKPNMIENFGEEEGTAKFDEI 70

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + + G+V   S             EL    +E++  + + P+     +E+  
Sbjct: 71  KHLSQETSVYVTGVVKEDSRSKF-------GYELDVTDLEVIGQSHDYPITP---KEHGV 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                 R L LR       +  R  II +         FI+  +PIL+ ++ E   +   
Sbjct: 121 EFLLDNRHLWLRSKRQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILSGNAAENTTELFE 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E  
Sbjct: 181 TDYFGNSAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYP 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAIRRY 286
           FV  D+ L+  E  ++ + +   +                   +   F R+ YDDAI   
Sbjct: 238 FVTHDESLDIQEAYVKALIQGVLDNAAYALETLERDTSMLQKYIDTPFKRVSYDDAIDLL 297

Query: 287 G-------TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
                   TD   + +     +  E ++ + + V + I++    ++ + +    G   R 
Sbjct: 298 QAHENDEDTDYEHVEHGDDFGSPHETWISNYYGVPTFIVNYPASFKAFYMKPVPGNPERV 357

Query: 340 FCDRM 344
            C  +
Sbjct: 358 LCADL 362



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 323 TWISNYYGVPTFIVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 369

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    +++L+  ++ G+  +     +       + G  PH G   G++R+V  
Sbjct: 370 EIIGGSERETDYDLLLKKIADFGLDPKD----YDWYLELRKFGSVPHAGFGLGLERMVTF 425

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G +++RE   FP   N    
Sbjct: 426 VAGTEHIREAIPFPRMINRIQP 447


>gi|329940507|ref|ZP_08289788.1| aspartyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329300568|gb|EGG44465.1| aspartyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 440

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 75/353 (21%), Positives = 142/353 (40%), Gaps = 36/353 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI---AKSV 65
             DL    +G  V +SGW H +R    + F+ +RDH G+ QV      A  +I    + +
Sbjct: 10  VSDLR-EHLGRTVSVSGWAHTLRLLSKVQFVVVRDHTGMVQVTHRRGGAGDDIEAALQQL 68

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + I G V        N  +    +E+  +++E+L+ A         + +     R
Sbjct: 69  TPESAVRITGRVAE------NPIVKLHSLEIIPERVEVLNRAATPLPI---DEQTGLEHR 119

Query: 126 FKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
             +RFLD+RR    + +   +T +   MR    A+   E  TP L  ++ E   +     
Sbjct: 120 LDWRFLDVRRRPAAQLMFAVQTTLEQGMREYAYAQGATEMHTPKLMGTASESGAEVFELG 179

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             ++ ++ A  Q+PQ YKQ+ +++G ++ F+I P FR E   + R   EF  +D+E++++
Sbjct: 180 YFDRSAYLA--QSPQFYKQMAISAGIEKVFEIGPVFRAEPSFTSRHATEFTGVDVELAWI 237

Query: 245 E-QDDILNTMENVLRGVFEEFSNGNT-------------VSNNFLRICYDDAIRRY---G 287
           +  +D++   E +L     + +  +               +  F RI    A       G
Sbjct: 238 DGVEDVMAFEEQMLAHAIAKVAGAHREAVREQFGVEITVPATPFPRITMAKAHDILRKGG 297

Query: 288 TDKPDLRNPII---MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
            D    +  +      +++ H   +    F  I     G   +         +
Sbjct: 298 WDSQGTKEDLDPEGERSISAHIQQATGHEFVFITQYPVGIRPFYHMRPADNPS 350



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 24/130 (18%)

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
             EF +I  +P                PF   +                  +DL+  G E
Sbjct: 324 GHEFVFITQYP------------VGIRPFYHMRPAD--------NPSVTLSFDLLWKGLE 363

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I +G  R H  +V+++  +  G+S E +++       AF+ G PPHGG+  G+ R++M+L
Sbjct: 364 ITTGAQREHRYDVLMKQAAEKGMSPEPMQD----YLNAFRYGCPPHGGLGMGLGRVLMVL 419

Query: 551 LGAKNVREVS 560
           LG +++RE +
Sbjct: 420 LGLESIREAT 429


>gi|71027527|ref|XP_763407.1| lysyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68350360|gb|EAN31124.1| lysyl-tRNA synthetase, putative [Theileria parva]
          Length = 551

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 60/272 (22%), Positives = 115/272 (42%), Gaps = 22/272 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRV-RPHGGIIFLDIRDHYGITQVVANPDSACF------EIAK 63
           + G       V ++G V R+      + FLDI+      QV AN  +         +   
Sbjct: 87  EAGAHLENELVSIAGRVSRIASSSSKLRFLDIKSEGTKLQVFANFANHDASTGDFNDTYN 146

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           +++   ++ + G                G++ +  + ++ILS    +    FG ++    
Sbjct: 147 NIKRGDIIGLTG---------FPGKSKRGELSVFPKSVQILSPCLHMLPDKFGLKDND-- 195

Query: 124 IRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
           +RF+ R+LDL  +    K +  R+RII+ +R  + +  F E  TP+L T S+   A+ F+
Sbjct: 196 VRFRQRYLDLMMNDDSLKVMKLRSRIIDYLRKFLTSRGFFEVETPMLKTTSTGASAKPFI 255

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     + +  AP+   +L++  GF++ F+I  CFR+E       P EF   +   
Sbjct: 256 THHNELDLDLF-MRIAPELPLKLIIIGGFEKVFEIGKCFRNEGIDPTHNP-EFTSCEFYW 313

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           ++ +  D++   E  L  +  E      V  +
Sbjct: 314 AYADYHDLMKLTEEFLSSLVFELFGKYEVLYH 345



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 25/149 (16%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           I     +  +I+DFP               +P +      E++           +++L  
Sbjct: 421 IEDQIVKPTFIVDFP------------QCTSPLSKWHRSKENV---------CERFELFI 459

Query: 487 NGFEIASGGIRNHMSEVM----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
            G E+ +     +          Q      +  +  +        A + G+PP  G   G
Sbjct: 460 CGKELINSYTELNDPITQRDCFKQQQKAKDLGDDEAQPPDEAFCTALEYGLPPTAGWGIG 519

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           IDR+ M L    N++EV  FP  +   D 
Sbjct: 520 IDRLTMFLADKNNIKEVIFFPTMRPLNDP 548


>gi|125624792|ref|YP_001033275.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166980088|sp|A2RMQ1|SYN_LACLM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|124493600|emb|CAL98585.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071592|gb|ADJ60992.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 447

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/365 (20%), Positives = 132/365 (36%), Gaps = 47/365 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-----------NPDSACFEIA 62
              VG  V++  WV      G + FL +RD     Q V               +A F+  
Sbjct: 11  KDHVGETVKIGAWVADKSGKGKLQFLQLRDGTAFFQAVVFKPNMIEKFGEEEGTAKFDEI 70

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + + G+V   S             EL   ++E++  + + P+     +E+  
Sbjct: 71  KHLSQETSVYVTGVVKEDSRSKF-------GYELDVTELEVIGHSHDYPITP---KEHGV 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                 R L LR       +  R  II +         FI+  +PIL+ ++ E   +   
Sbjct: 121 EFLLDNRHLWLRSKRQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILSGNAAENTTELFE 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E  
Sbjct: 181 TDYFGNPAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYP 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAIRRY 286
           FV  D+ L+  E  ++ + +   +                   +   F R+ YDDAI   
Sbjct: 238 FVTHDESLDIQEAYVKALIQGVLDNAAYALETLERDTSMLQKYIDTPFKRVSYDDAIDLL 297

Query: 287 G-------TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
                   TD   + +     +  E ++ + + V + I++    ++ + +    G   R 
Sbjct: 298 QAHENDEDTDYEHVEHGDDFGSPHETWISNYYGVPTFIVNYPASFKAFYMKPVPGNPERV 357

Query: 340 FCDRM 344
            C  +
Sbjct: 358 LCADL 362



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 323 TWISNYYGVPTFIVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 369

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    +++L+  ++ G+  +     +       + G  PH G   G++R+V  
Sbjct: 370 EIIGGSERETDYDLLLKKIADFGLDPKD----YDWYLELRKFGSVPHAGFGLGLERMVTF 425

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G +++RE   FP   N    
Sbjct: 426 VAGTEHIREAIPFPRMINRIQP 447


>gi|168177968|ref|ZP_02612632.1| asparaginyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670812|gb|EDT82786.1| asparaginyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 463

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/432 (17%), Positives = 143/432 (33%), Gaps = 68/432 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWV 70
               +   V+++GWV  VR      F+++ D      V          F+    +     
Sbjct: 13  TEKYMDKEVKINGWVRTVRDSKNFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G++                 E+ A K+ I   +     P+  +R   E +R     
Sbjct: 73  VEVEGIIQPTPN-------AKQPFEIKATKVSIEGKSSTDY-PLQKKRHTFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++        F+  +TPI+T S  EGA +    + ++   
Sbjct: 124 LRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDLNN 183

Query: 190 -------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+   A      Q      A  F   +   P FR E+  + R   E
Sbjct: 184 IPKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHASE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSN 272
           F+ ++ EM+F E  D L+  E++++ V                            N V++
Sbjct: 244 FWMIEPEMAFAELTDYLDNAEDMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDNVVNS 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           +F RI Y +A+             +   +   TEH  +   ++F K + V    +     
Sbjct: 304 DFKRITYTEAVELLQKSGAKFDYEVEWGIDLQTEHERYLTEQIFKKPVFVTDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR 390
                  +AF  R+N+  ++     L          G    +G   +   +   E     
Sbjct: 361 -------KAFYMRLNDDGKTVAAADLLV-------PGVGEIIGGSQREERLDVLEKRMEE 406

Query: 391 LDMQDGDSCFFI 402
           L++   D  +++
Sbjct: 407 LNLNKEDYWWYL 418



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 24/138 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P        K I      F M        + ND     A    LV    EI 
Sbjct: 349 KPVFVTDYP--------KDIKA----FYM--------RLNDDGKTVAAADLLVPGVGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+ +    + ++K      +       + G   H G   G +RI+M + G
Sbjct: 389 GGSQREERLDVLEKRMEELNLNK----EDYWWYLELRKYGETKHSGYGLGFERILMYITG 444

Query: 553 AKNVREVSLFPMSQNFCD 570
             N+R+V  FP +    +
Sbjct: 445 MTNIRDVIPFPRTPGSAE 462


>gi|19111871|ref|NP_595079.1| mitochondrial asparagine-tRNA ligase Slm5 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74625260|sp|Q9P6I0|SYNM_SCHPO RecName: Full=Asparaginyl-tRNA synthetase, mitochondrial; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|7801317|emb|CAB91185.1| mitochondrial asparagine-tRNA ligase Slm5 (predicted)
           [Schizosaccharomyces pombe]
          Length = 441

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 66/325 (20%), Positives = 129/325 (39%), Gaps = 31/325 (9%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
             G  + ++GWV  +R    + F  + D      +         E +K +     + I+G
Sbjct: 18  HNGELISINGWVRSIRKLKNVCFAMVSDGTCQQALQV---VTSPEQSKKLSYGASVNIEG 74

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            +    A + NA +   Q EL A+KI+I     +   P+  +    E +R +   L LR 
Sbjct: 75  QL----AVSKNAKLGLQQYELLAEKIKIYGQINDDNYPIQKKHLTTEMLR-QIPHLRLRT 129

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS----------- 184
               +    R+  + ++R    +++F E + PI+T+S  EGA +    +           
Sbjct: 130 AKQGEIFRLRSDSLKALRQFFSSKDFTETNPPIITSSDCEGAGEVFTLTPQETHKNKSFE 189

Query: 185 RVNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           R +Q  F+   A      Q     +A G  R + I+P FR E   + R   EF+ L+ E+
Sbjct: 190 RDDQKHFFDRPAFLTVSTQLHLEALALGLSRVYTISPAFRAEQSHTSRHLAEFWMLEAEV 249

Query: 242 SFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLR-------ICYDDAIRRYGTDKPDL 293
           +F+     + + ME++++         N   +++ +       + Y +AI      K   
Sbjct: 250 AFMTSLSQLTSLMEDMIKYTLNSLMEQNYHRDHWDQLLKPWKCMTYSEAIEELSAVKKTW 309

Query: 294 RN-PIIMHNVTEHFVHSEFRVFSKI 317
           +  P   ++++         +  K 
Sbjct: 310 KYPPKWGNDLSSEHEKYLCEILHKT 334



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 44/133 (33%), Gaps = 33/133 (24%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             ++ D+P                PF M   G +++   DL         LV    E+A 
Sbjct: 335 PVFVTDYP------------QKIKPFYMKSSGPDTVAAVDL---------LVPQVGELAG 373

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G +R            +     +             +    PHGG   GI+R++  L G 
Sbjct: 374 GSLR-----------KDHLDEYKTYPPELQWYLDLMKYSNAPHGGFGLGIERLIAFLEGE 422

Query: 554 K-NVREVSLFPMS 565
             NV+E   FP S
Sbjct: 423 NTNVKETIPFPRS 435


>gi|150026281|ref|YP_001297107.1| asparaginyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149772822|emb|CAL44306.1| Asparagine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 478

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 50/290 (17%), Positives = 107/290 (36%), Gaps = 29/290 (10%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAK 63
           T     L  +     V + GWV   R +    F+ + D   I   Q V + ++   E  K
Sbjct: 4   TRILDLLNSTKTLQEVNVKGWVRTFRNNQ---FIALNDGSTIHNIQCVVDFENTADETLK 60

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            + +   + + G ++              + E+   K+EIL  ++    P+  + +    
Sbjct: 61  RITTGAAVSVTGALVESQGAG-------QKYEVQVVKLEILGDSDAEKFPIQPKNKPSLD 113

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
              +   L +R +     +  R+ +  ++      + F+  +TPI+T S  EGA +    
Sbjct: 114 FLRENAHLRVRTNMFGAIMRVRSVLSYAVHSYFQEKGFVYVNTPIITGSDAEGAGEMFKV 173

Query: 184 SRV--------------NQGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           + +               +  F+          Q +    A    + +   P FR E+  
Sbjct: 174 TALPFDNTPRTEDGNVNYKEDFFGKETNLTVSGQLEGETFAMALGQIYTFGPTFRAENSN 233

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           + R   EF+ ++ E++F +  D ++  E+ ++ V +   +       FL 
Sbjct: 234 TSRHLAEFWMIEPEVAFNDLTDNMDLAEDFIQYVIKYTIDKCPDDLKFLE 283



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 14/117 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M           D  +++A   D++  G  EI  G  R    +V+++   
Sbjct: 370 DYPANIKAFYMR-------LNEDGKTVRAM--DILFPGIGEIVGGSQREERFDVLVEKMK 420

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +GI     E          + G   H G   G +R+V+ + G  N+R+V  FP + 
Sbjct: 421 ALGID----EEELWWYLDTRRFGSAVHSGFGLGFERLVLFVTGMTNIRDVIPFPRTP 473


>gi|15673810|ref|NP_267985.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. lactis
           Il1403]
 gi|20139920|sp|Q9CEK9|SYN_LACLA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|12724857|gb|AAK05926.1|AE006413_2 asparaginyl-tRNA synthetase [Lactococcus lactis subsp. lactis
           Il1403]
          Length = 447

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/365 (20%), Positives = 132/365 (36%), Gaps = 47/365 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
              VG  V++  WV      G + FL +RD       VV  P+          +A F+  
Sbjct: 11  KDHVGETVKIGAWVADKSGKGKLQFLQLRDGTAFFQAVVFKPNMIENFGEEEGTAKFDEI 70

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + + G+V   S             EL    +E++  + + P+     +E+  
Sbjct: 71  KHLSQETSVYVTGVVKEDSRSKF-------GYELDVTDLEVIGQSHDYPITP---KEHGV 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                 R L LR       +  R  II +         FI+  +PIL+ ++ E   +   
Sbjct: 121 EFLLDNRHLWLRSKRQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILSGNAAENTTELFE 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E  
Sbjct: 181 TDYFGNSAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYP 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAIRRY 286
           FV  D+ L+  E  ++ + +   +                   +   F R+ YD AI   
Sbjct: 238 FVTHDESLDIQEAYVKALIQGVLDNAAYALETLERDTSMLQKYIDTPFKRVSYDAAIDLL 297

Query: 287 G-------TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
                   TD   + +     +  E ++ + + V + I++    ++ + +    G   R 
Sbjct: 298 QAHENDEDTDYEHVEHGDDFGSPHETWISNYYGVPTFIVNYPASFKAFYMKPVPGNPERV 357

Query: 340 FCDRM 344
            C  +
Sbjct: 358 LCADL 362



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 323 TWISNYYGVPTFIVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 369

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    +++L+  ++ G+  +     +       + G  PH G   G++R+V  
Sbjct: 370 EIIGGSERETDYDLLLKKIADFGLDPKD----YDWYLELRKFGSVPHAGFGLGLERMVTF 425

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G +++RE   FP   N    
Sbjct: 426 VAGTEHIREAIPFPRMINRIQP 447


>gi|294936249|ref|XP_002781678.1| asparaginyl-tRNA synthetase, putative [Perkinsus marinus ATCC
           50983]
 gi|239892600|gb|EER13473.1| asparaginyl-tRNA synthetase, putative [Perkinsus marinus ATCC
           50983]
          Length = 747

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 56/313 (17%), Positives = 108/313 (34%), Gaps = 44/313 (14%)

Query: 1   MHRYRTHSCGDLGVSDV-----------GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGIT 48
           +H Y T   G   V D+           G  V + GWV   R  G G  F++I D   + 
Sbjct: 251 IHPYSTCVGGRTRVKDILLRTDGGAGLIGKTVSVCGWVRTKRSQGSGFAFVEISDGSCLQ 310

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQK---IEILS 105
            +    DS+C +              G  +      + +      +E+S ++   I+++ 
Sbjct: 311 GLQLVLDSSCPD----FEGTIAQIATGASIQAIGALVASPAKGQAVEVSVREKGKIKVIG 366

Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
             E    P+  ++   E +R +   L  R + +      R+ +  ++    ++ +F    
Sbjct: 367 GVESAAYPLAKKQHSREFLR-EIAHLRPRTNLIGAVARVRSSLSGAVHAFFMSRDFKYVH 425

Query: 166 TPILTASSPEGARDFLVPSRVNQG---------------------SFYALPQ---APQQY 201
           TP++T++  EGA +    + + Q                       F+  P       Q 
Sbjct: 426 TPLITSADCEGAGEMFQVTSLLQKAEGAHQDVKIDSNTGRFDYKQDFFGRPTYLTVSGQL 485

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
                A      +   PCFR E+  + R   EF+ ++ E+ F +  D +   E  ++   
Sbjct: 486 NVENYACALSDVYTFGPCFRAENSHTSRHLAEFWMIEPELCFADIHDNMKCAEEFIQHCA 545

Query: 262 EEFSNGNTVSNNF 274
                       F
Sbjct: 546 RHVLAHCREDIAF 558



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 9/120 (7%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSN 510
              A   F M           D         D++     E+  G +R    +V+ +  S+
Sbjct: 635 YPAAIKAFYMRANEA----DEDESKQTVAAMDILAPLVGEVCGGSVREERLDVLDKKLSD 690

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           + +    VE+ +       + G  PH G   G +R++M++ G +N+R+V  +P     C+
Sbjct: 691 LNM---DVEDYW-WYRDLRRFGSVPHAGFGIGFERLIMMMTGVENIRDVIPYPRYPGRCE 746


>gi|13507991|ref|NP_109940.1| asparaginyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501035|sp|P75521|SYN_MYCPN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|1674281|gb|AAB96228.1| asparaginyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 455

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 109/274 (39%), Gaps = 19/274 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCID 74
              ++L+GW+   R    IIFL++ D   +  + A         F +A+S+     + + 
Sbjct: 18  NKKIKLTGWLKNKRTSANIIFLEVNDGSTLLNLQAVVKQDQPELFALAESISLASAVSVS 77

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V                +EL  ++I +LS A         ++E+         +L +R
Sbjct: 78  GTVALTPKSKQP-------LELVVKQINVLSTARADYPLQ--KKEHSLEFFRNNAYLRVR 128

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA- 193
             T    +  R+ +  ++       +F+   +PILT++  EGA +      + QG  +  
Sbjct: 129 ARTYFAIMKVRSLLSQAIFDYFFKNDFVLVHSPILTSNDCEGAGETFE---LKQGKEFFN 185

Query: 194 ---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                    Q+     A  F + F   P FR E   + R   EF+ ++ E++F    D++
Sbjct: 186 KTTYLTVSGQFGAECYAQAFKKVFTFGPTFRAEKSHTSRHLSEFWMIEPEVAFANLKDLI 245

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
             +E+ ++ V ++         +FL   +D  + 
Sbjct: 246 KLIESTVKTVIKQVMQKAKQELDFLEKQFDVKLM 279



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/366 (13%), Positives = 108/366 (29%), Gaps = 62/366 (16%)

Query: 230 LPGEFYQLDMEMSFV--EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
              EF++ +  +         I+     + + +F+ F   + V  +   +  +D      
Sbjct: 114 HSLEFFRNNAYLRVRARTYFAIMKVRSLLSQAIFDYFFKNDFVLVHSPILTSNDCEG--A 171

Query: 288 TDKPDLRNPIIMHNVTEHFVHSE-------FRVFSKILSVNPGYE------------VWA 328
            +  +L+      N T +   S         + F K+ +  P +              W 
Sbjct: 172 GETFELKQGKEFFNKTTYLTVSGQFGAECYAQAFKKVFTFGPTFRAEKSHTSRHLSEFWM 231

Query: 329 IPAKGGGGNRAFCDRMNE--------WARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
           I  +    N     ++ E            + +  L ++  + D    +  +  +    N
Sbjct: 232 IEPEVAFANLKDLIKLIESTVKTVIKQVMQKAKQELDFLEKQFD-VKLMERLKQITSTKN 290

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE-FCWIMD 439
               E  +    ++   +         +   F          E  +   +      ++++
Sbjct: 291 FHVLEYTKALEILK---TAQASGQANFEVQDFNFGLDLKTEHERFLCEQHFHNQPVFVIN 347

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRN 498
           +P        K        F M Q         D  ++ A   DL+     EI  G  R 
Sbjct: 348 YP--------KDFKA----FYMKQNA-------DGRTVGAV--DLLFPQIGEICGGSERE 386

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              E +++    + I  +             + G     G   G DR++  + G +N+R+
Sbjct: 387 GNLEKLVERCQAMQIDTQT----LNWYLDMRKWGYFASAGFGLGFDRLLAYICGLENIRD 442

Query: 559 VSLFPM 564
              FP 
Sbjct: 443 AIPFPR 448


>gi|320450960|ref|YP_004203056.1| aspartyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151129|gb|ADW22507.1| aspartyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 422

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 72/253 (28%), Positives = 117/253 (46%), Gaps = 20/253 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
              VG  V L G++H  R  G + FL +RD  GI QVV           K    E  L +
Sbjct: 9   KKYVGEEVELLGFLHWRRDLGKVQFLLLRDRSGIVQVVTGGQ-------KLPLPESSLRV 61

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YPESIRFKYRFL 131
            G V+             G +E+ A++IEILS A E       + E         +YR++
Sbjct: 62  RGQVVENPK-------APGGLEVQAKEIEILSPALEPTPVEIPKEEWRASPDTLLEYRYV 114

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR +     +  +  ++   R  +  ++F E  TP +  +  EG             ++
Sbjct: 115 TLRGEKARAPLRVQAALVRGFRRYLDRQDFTEIFTPKVVRAGAEGGSGLFGVDYFEYRAY 174

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDIL 250
            A  Q+PQ YKQ +M   F+R +++AP +R E+  + R   E+  LD+EM F+E ++D++
Sbjct: 175 LA--QSPQLYKQ-IMVGVFERVYEVAPVWRMEEHNTSRHLNEYLSLDVEMGFIEGEEDLM 231

Query: 251 NTMENVLRGVFEE 263
              EN+L+ + EE
Sbjct: 232 RLEENLLQEMLEE 244



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 59/159 (37%), Gaps = 28/159 (17%)

Query: 415 DARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
           D      + LG      +  ++ +I  +P             +  PF             
Sbjct: 290 DLSEEAERLLGQYAKERWGSDWLFITHYP------------RSLRPFYTYPEE------- 330

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
              +     +DL+  G EI SGG R H    ++++    G+        F G    F+ G
Sbjct: 331 ---NGTTRSFDLLFRGLEITSGGQRIHRYPDLVESLKAKGMDP----EAFQGYLEVFKYG 383

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           MPPHGG A G +R+   LLG  NVR    FP  ++    
Sbjct: 384 MPPHGGFAIGAERLTQKLLGLPNVRYARAFPRDRHRLTP 422


>gi|229085162|ref|ZP_04217409.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228698143|gb|EEL50881.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 432

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 123/262 (46%), Gaps = 15/262 (5%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V L GWV ++R  G I FL +RD  G+ Q V   + A ++I      E V+ I G ++
Sbjct: 19  KVVLLQGWVKKIRHLGNISFLLLRDRTGVIQCVLEKELAGYKI----DVESVVQIIGELV 74

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPESIRFKYRFLDLRRDT 137
             +   +   +I        +++++L+ +E+LP  V   +           R + LR + 
Sbjct: 75  ETTKTELGVEVIV-------KEVKVLNTSEQLPFEVNKRKLQVGLDQMLNERVISLRHER 127

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           +      ++ ++ +    +I  +F    TP + +   EG  +        + ++ A  Q+
Sbjct: 128 IQAIFTIQSTLVQAFSEFLIENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAYLA--QS 185

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENV 256
           PQ YKQ+++A G +R F+IAP +R E   S R   E+  LD+E+ F+ +  +++    NV
Sbjct: 186 PQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHEVMALEANV 245

Query: 257 LRGVFEEFSNGNTVSNNFLRIC 278
           LR +FE+           L++ 
Sbjct: 246 LRHMFEQVEQKCKKELKLLQVT 267



 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 45/166 (27%), Positives = 65/166 (39%), Gaps = 26/166 (15%)

Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPF 459
           I     K  S A D      + LG      +  +F +I  +P             A   +
Sbjct: 285 ILKTKYKKESPAGDLDTEGEKLLGKYVKETYGSDFVFITHYP-----------KEARPMY 333

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
           TMP    + +  +         +DL+  G EI SG  R H  +++L +F   G+      
Sbjct: 334 TMPNRENQEVTDS---------FDLLYKGLEITSGAQRIHDYDMLLSSFKEKGLHSG--- 381

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             F      F+ G PPHGG   G++R+V   L   NVRE S FP  
Sbjct: 382 -NFQSYIDTFRYGCPPHGGFGIGLERLVYKFLELSNVREASAFPRD 426


>gi|281207090|gb|EFA81274.1| asparagine-tRNA ligase [Polysphondylium pallidum PN500]
          Length = 663

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 58/287 (20%), Positives = 108/287 (37%), Gaps = 20/287 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           D+  +   + V + GW+H VR    I F+++RD  G  Q V   D     I   ++ E  
Sbjct: 234 DISPAIANTRVHIKGWIHHVRSQRKIAFIELRDGTGFLQCVLQGDLVHPSIVDDLKREAT 293

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G +    A+          +EL     +++  +      +    +         R 
Sbjct: 294 VSLIGTLTLPPADKHCP----QGVELQVDYWKLIGASHLDLEGII-NIDSNVDQMLDQRH 348

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           + LR       +  R+  + + R       + E S P L  +  EG  +        Q +
Sbjct: 349 IVLRGSRASSIMKLRSITMKAFRDHYFENGYYEVSPPTLVNTFCEGGSELFTLDYFGQPA 408

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y + ++    D  F +A  +R E  ++ R   EF  L+ E  F+  +D+L
Sbjct: 409 Y--LTQSSQLYLETMIPVAGD-VFCMAQSYRAELSKTRRHLAEFTHLEAECPFITFEDLL 465

Query: 251 NTMENVLRGVFEEFSNGNT------------VSNNFLRICYDDAIRR 285
           + +E ++  V E     +                 F R+ Y D I+ 
Sbjct: 466 DRIEYLVCDVAERIFKIDKDLLLSVNPNAKVPKRPFKRMDYADGIKY 512



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 46/122 (37%), Gaps = 13/122 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
           +       F M +            +      DL+  G  EI  G +R      ++ A+ 
Sbjct: 554 RFPAEMKAFYMARC--------PEDNTLTESTDLLMPGVGEIVGGSMRISDYTQLMDAYK 605

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G+      +++       + G  PHGG   G++R +   LG +++R V L+P  +  C
Sbjct: 606 KEGLDP----SQYYWFTDQRKYGTTPHGGYGLGVERFLTWFLGEEHIRNVCLYPRYRERC 661

Query: 570 DL 571
             
Sbjct: 662 QP 663


>gi|238061433|ref|ZP_04606142.1| lysyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237883244|gb|EEP72072.1| lysyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 502

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/283 (22%), Positives = 114/283 (40%), Gaps = 20/283 (7%)

Query: 5   RTHSCGDLGVSDV--------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD 55
           RT +  D+             G  V ++G V  VR  G + F  +RD  G   Q + + D
Sbjct: 43  RTSTLADVRAKYADLPTDTATGDRVSVTGRVIFVRNTGKLCFATLRDGDGTELQAMLSLD 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                 A+ +     L   G  +  + E I +    G++ + A+   + + A        
Sbjct: 103 RVG---AERLDDWKRLVDLGDHVGVTGEVITSR--RGELSVLAEAWAVTAKALRPLP--V 155

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +   E  R + R++DL      + +V+ R   + S+R  +  + F+E  TP+L     
Sbjct: 156 AHKPLSEEARVRQRYVDLIVRPQARQMVRTRAAAVRSLRDCLHGQGFVEVETPMLQLLHG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  G DR F+I   FR+E   S   P E
Sbjct: 216 GAAARPFVTHSNALNTDLY-LRIAPELFLKRAVVGGVDRVFEINRNFRNEGVDSSHSP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           F  L+   ++ + D + +   N+++      +    V++   R
Sbjct: 274 FAMLEAYQAYGDYDTMASLTRNLVQQAAIAVAGSTVVAHADGR 316



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 56/151 (37%), Gaps = 28/151 (18%)

Query: 419 HIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +A+EL   ++        ++ D+P     EE   +  AH                    
Sbjct: 369 KLAEELFEELVVPGLQAPTFVRDYP-----EETSPLTRAHR----------------SEP 407

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
             A ++DL   GFE+ +         V  +            ++          RA + G
Sbjct: 408 GLAEKWDLYVLGFELGTAYSELVDPVVQRERLVAQAQLAARGDDEAMRLDEDFLRAMEYG 467

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP GG+  GIDR++M L G   +RE  LFP
Sbjct: 468 MPPAGGMGMGIDRLLMALTGLG-IRETILFP 497


>gi|300361733|ref|ZP_07057910.1| asparagine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354352|gb|EFJ70223.1| asparagine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 432

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 75/324 (23%), Positives = 118/324 (36%), Gaps = 28/324 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      FE AKS+R E 
Sbjct: 10  SSKHVDQEVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFEAAKSLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G V                 E+    ++I+S  E       G +E+        R
Sbjct: 70  SFYITGTVHEDKRSHF-------GYEIQISDLKIVSNNE---GYPIGNKEHGVDFLLDNR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +  +       E FI+   PI   S+PEG          N  
Sbjct: 120 HLWLRSKRPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNND 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           L+  E  L  + ++    N           +  +R  G D   LR P    N T      
Sbjct: 237 LDIQERYLAYMVKQVLENN-----------EYELRILGRDPEKLR-PTTEGNFTRLPYDD 284

Query: 310 EFRVFSKILSVNPGYEVWAIPAKG 333
             ++  +        + +  P +G
Sbjct: 285 AIKMLQEAGRDIKWGDDFGAPDEG 308



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 52/175 (29%), Gaps = 28/175 (16%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEE 449
           +G+       D +K    A         + G  +            +I+++P        
Sbjct: 274 EGNFTRLPYDDAIKMLQEAGR-DIKWGDDFGAPDEGYISEQFDRPVFIVNYP-------- 324

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                   PF M +      +      I    Y       EI  G  R    E++ +   
Sbjct: 325 ----TTIKPFYMKKNPDNPKEYLCADVIAPEGY------GEIFGGSEREGNYEILKKQIE 374

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             G++ E  +          + G  PH G   G +R +  +    ++RE   FP 
Sbjct: 375 EAGLNLEDYQ----WYLDLRKFGGVPHSGFGMGFERTIAWICKLDHIREAIPFPR 425


>gi|284043143|ref|YP_003393483.1| lysyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283947364|gb|ADB50108.1| lysyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 491

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 94/241 (39%), Gaps = 17/241 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV---RSEWVLCIDGLVM 78
           R++G +   R  G   F+D+ D  G  Q+ A  D    E    +       ++ +DG V 
Sbjct: 66  RIAGRIAARRGQGKAAFIDLVDRSGRMQLHARVDVLGQESLDRLVGLDLGDLIGVDGTVF 125

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR-DT 137
                        G++ L A    +L+ +   P P           RF++R LDL   + 
Sbjct: 126 RSRR---------GELSLKADDWTLLAKSLR-PPPEKHHGVQDVETRFRHRELDLMSSEE 175

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
                + R +II ++R  +    F+E  TP+L        AR F           Y L  
Sbjct: 176 TRALFISRAKIIAAIRRFLDDAGFVEVETPVLQPLYGGANARPFTTHHNALDRELY-LRI 234

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + Y +  +  G ++ +++   FR+E       P EF  ++   ++ +  D+    E +
Sbjct: 235 ATELYLKRCIVGGLEKVYELGKDFRNEGVSHKHNP-EFTMVEYYEAYADYLDVAARTEQL 293

Query: 257 L 257
           +
Sbjct: 294 V 294



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 13/121 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                 +PF       + L           +++   NG EIA+     +  +   + F  
Sbjct: 380 DYPVELSPFAKRHRDDDRL---------VERFEAYVNGMEIANAFSELNDPDEQRRRFEQ 430

Query: 511 VGIS----KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                    +  +       +A + GMPP GG+  GIDR+VMLL G +++REV LFP  +
Sbjct: 431 QRAHAEAGDDEAQPWDESFLQALEQGMPPTGGVGLGIDRLVMLLTGRRSIREVVLFPAMR 490

Query: 567 N 567
           +
Sbjct: 491 D 491


>gi|227876368|ref|ZP_03994480.1| lysine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269975932|ref|ZP_06182936.1| lysyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|307700459|ref|ZP_07637498.1| lysine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|227842909|gb|EEJ53106.1| lysine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269935760|gb|EEZ92290.1| lysyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|307614444|gb|EFN93674.1| lysine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 518

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 52/275 (18%), Positives = 108/275 (39%), Gaps = 19/275 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFE 60
            +Y     G+     VG    ++G V  +R  G + F  +++  G   Q++ +      +
Sbjct: 61  EKYPNLEAGEETDDLVG----VAGRVRLMRSSGKLAFATLQEGNGNTIQIMISQGEIGSD 116

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
              + +++  L   G  +      I++    G++ +   K ++   +       +   + 
Sbjct: 117 SLAAYKTDVDL---GDHLYVHGRVISSK--RGELSIFVDKWQLTCKSLRPLPKTYTNDKG 171

Query: 120 ----YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 E  R + R+LD+      +++V+ R R++ S+R  +    +IE  TP+L     
Sbjct: 172 EEVTLSEDTRIRQRYLDMITRPAARDMVRNRARVVQSLRRYLDECGYIEVETPMLQVIHG 231

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F           Y L  AP+ + +  +  G DR F+I   FR+E   S   P E
Sbjct: 232 GAAARPFETHMNAYDMQLY-LRIAPELFLKRCLIGGIDRVFEINRNFRNEGADSSHSP-E 289

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           F  ++   ++ +   I +    +++    E     
Sbjct: 290 FTMMEAYCAYGDYHQIADLTREMIQRCAREVYGTE 324



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 26/142 (18%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           ++    +E  ++ DFP     E+   +   H                     +  ++DL+
Sbjct: 394 LVGDQIWEPTFVADFP-----EDTSPLVKGH----------------PEKPGQVQKWDLI 432

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIAA 541
             GFE+A+G    +   +    F    +                  A + GMPP GG+  
Sbjct: 433 IRGFEVATGYSELNDPVIQRARFEAQSLDAAKGDPEAMQLDEDFLVAMEHGMPPAGGMGM 492

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+DR++M L G   +RE   FP
Sbjct: 493 GLDRLLMTLTGLG-IRETITFP 513


>gi|327282572|ref|XP_003226016.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           [Anolis carolinensis]
          Length = 480

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 108/265 (40%), Gaps = 20/265 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ +++ GWV  VR    ++FL I D   +  +    D      ++ +     + + G +
Sbjct: 42  GNDIKVQGWVRSVRSQKEVLFLHINDGSSLESLQVVADPRLE--SRELTFGSSVEVQGKL 99

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    +  N       +EL+A+ I ++   + L  P+  +   P     ++  +  R ++
Sbjct: 100 IKSPHKRQN-------VELAAENIRVVGPCDSLAFPLKYKTHQPLEYLRQFPHVRCRSNS 152

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP----------SRVN 187
           L   +  R+    ++        ++   TPI+T++  EGA +                 +
Sbjct: 153 LSALLRIRSEATGAIHSYFKDNGYLHIHTPIITSNDCEGAGEVFQVEPAKEVKEPEENPH 212

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ- 246
             +  A      Q    +MA  F + +   P FR +  +S +   EFY ++ E++FVE  
Sbjct: 213 FFNIPAFLTVSGQLHLEVMAGAFTKVYSFGPTFRADYSQSRKHLAEFYMVEAELAFVESL 272

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS 271
            D++  ME++ + V +   +     
Sbjct: 273 QDVMQIMEDLFKRVTDVVLSKCPHD 297


>gi|284054711|ref|ZP_06384921.1| lysyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 296

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 7/241 (2%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R+ G +   R  G I F+ + D     Q+         +   +      L   G  +   
Sbjct: 61  RVCGRITFKRDSGSIGFIGLTDASATIQLKIEKKLVTGDPGLTFNQIKKLLDIGDFIGVE 120

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHK 140
                 N   G++ +   +++++S A  +P P          +  ++R +DL  + T  +
Sbjct: 121 GIGCRTN--RGELSIQVSRLDVISKA-TIPFPDSYYGINDPELCRRHREIDLVSNSTSLQ 177

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-GARDFLVPSRVNQGSFYALPQAPQ 199
               R+RII S+R  +    F E  TP+L +       R F+          Y L  A +
Sbjct: 178 RFKLRSRIIRSIRTYLWNAGFDEIETPVLQSIYGGVATRPFITHHNTLDIDLY-LRIATE 236

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + +  +  G ++ F+I   FR+E   S   P EF  +++  ++ +   I+  +E+++  
Sbjct: 237 LFLKRAVCGGMEKVFEIGRVFRNEGIDSTHNP-EFTSIEVYQAYADYFQIMALVEDLICA 295

Query: 260 V 260
           V
Sbjct: 296 V 296


>gi|320100934|ref|YP_004176526.1| asparaginyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753286|gb|ADV65044.1| asparaginyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 432

 Score =  168 bits (425), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 57/266 (21%), Positives = 110/266 (41%), Gaps = 20/266 (7%)

Query: 4   YRTHSCGDL-GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           YR+    D+     +G+ V + GW++R    GG  F+ +RD  G+ QVV +      E+ 
Sbjct: 3   YRS--IADVMNKDMIGAHVCIRGWIYRRSVVGGKAFIRVRDSSGVIQVVVDSGRLGEELV 60

Query: 63  KSVRSE---WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             +++      +   G V              G  EL A+  +I   + + P+    +  
Sbjct: 61  NELKNIGLEASVMACGTVREEPR-------APGGYELEAESFKITGYSRDFPI----KGG 109

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R L +R     K +  +  ++ + R    +  + E + PILTAS+ EG   
Sbjct: 110 EGLEYLLDNRHLWIRSPRFAKILKVKHTVLEAGREYFTSNGWWEVNPPILTASACEGGAT 169

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   Q ++  L Q+ Q Y + L+    ++ + + P FR E  R+ R   E++ L+ 
Sbjct: 170 LFPVDYFGQKAY--LSQSAQLYLEALI-YVLEKVWSLTPSFRAERSRTRRHLAEYWHLEP 226

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFS 265
           E ++   +D++   E ++  +     
Sbjct: 227 EAAWYTMEDMMRVAEELVSHIVRRVL 252



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 43/125 (34%), Gaps = 19/125 (15%)

Query: 447 EEEKKIDFAHNP-----FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI--RNH 499
           E EK     H P     F M          ++   +    +DL+         G   R  
Sbjct: 313 EFEKPFFVTHFPRQIKSFYMKVD------PSNPNVVLG--FDLLAPEGYGEIIGGGERED 364

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             +V+ Q     G++ +  +          + G  PH G   G++R  M + G  ++R+ 
Sbjct: 365 NYDVLYQKIVEQGLNPDDYK----WYLDLRRYGSVPHSGFGLGVERATMWIAGLDHIRDT 420

Query: 560 SLFPM 564
             FP 
Sbjct: 421 LPFPR 425


>gi|50364845|ref|YP_053270.1| lysyl tRNA synthetase [Mesoplasma florum L1]
 gi|50363401|gb|AAT75386.1| lysyl tRNA synthetase [Mesoplasma florum L1]
          Length = 499

 Score =  167 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 68/336 (20%), Positives = 126/336 (37%), Gaps = 35/336 (10%)

Query: 5   RTHSCGDLGVSDVG-----------SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA 52
           RTHS  +L     G           + + ++G +   R  G    FL+I D     QV  
Sbjct: 35  RTHSLKELIELFGGYEKDELATLQQTEISIAGRIKLYREAGNKAAFLNIEDQDSDIQVYV 94

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
             D        + R   +  I G       + I      G++ L A++  +LS A     
Sbjct: 95  RQDEIGDAAFANFRELDLGDIVGF------KGIMMKTNHGELSLRAKEYTLLSKALRPLP 148

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA 171
                 +  E   ++ R++DL  +   K +   RT+II +M+  +    ++E  TPIL +
Sbjct: 149 DKHAGIQDIEEK-YRRRYVDLITNPESKRVFQARTKIIRTMQQILDERGYMEVETPILHS 207

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                A    +           L  A + + + L+  GFD  ++I   FR+E   +   P
Sbjct: 208 VKGGAAAKPFITHYNALDVDVYLRIATELHLKRLIVGGFDGVYEIGRIFRNEGMSTRHNP 267

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF  L++ +++ +   +++  E + R      +              + ++  YG  K 
Sbjct: 268 -EFTSLELYVAYEDMFFLMDLTEEIFRKCNAAVN--------------ESSVIEYGGHKL 312

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           DL  P    ++ +         F K ++V    E+ 
Sbjct: 313 DLSKPFKRLHMVDGIKQVTGVDFWKEMTVEEALELA 348



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 58/151 (38%), Gaps = 7/151 (4%)

Query: 418 NHIAQELGI-INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             +A++  + +  + +    I++   +     E  I      +  P+      K N   S
Sbjct: 345 LELAKKHNVHVEKHNYTVGHIIN--LFYEEFVESTIIEPTFVYGHPKEISPLSKSNAEDS 402

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCG 532
               +++L   G E A+     +        F+          +           A +  
Sbjct: 403 RFTDRFELFIVGREYANAFSELNDPIDQYDRFNEQIKEAAAGNDEATEMDIDFIEALEHA 462

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP  GI  GIDR+VMLL  ++++++V LFP
Sbjct: 463 MPPTAGIGFGIDRLVMLLTNSESIKDVLLFP 493


>gi|295693031|ref|YP_003601641.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295031137|emb|CBL50616.1| Asparaginyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 432

 Score =  167 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 73/323 (22%), Positives = 120/323 (37%), Gaps = 34/323 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      F+ AKS+R E 
Sbjct: 10  SSKHVDEEVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFDTAKSLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G V   +             E+    ++++S  E       G +E+       +R
Sbjct: 70  SFYITGTVHEDARSHF-------GYEIQITDLKVVSNNE---GYPIGNKEHGVDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +  +       E FI+   PI   S+PEG          +  
Sbjct: 120 HLWLRSKKPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFDHD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDL 293
           L+  E  L  + ++    N                    NF+R+ YDDAI+       D+
Sbjct: 237 LDIQERYLAYMVKQVLENNEYELKILGRDPEKLRPTTEGNFVRLPYDDAIKMLQDAGRDI 296

Query: 294 RNPIIMH--NVTEHFVHSEFRVF 314
           +        +        +  VF
Sbjct: 297 KWGDDFGAPDEGYISEQYDRPVF 319



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 28/175 (16%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEE 449
           +G+       D +K    A         + G  +            +I+++P        
Sbjct: 274 EGNFVRLPYDDAIKMLQDAGR-DIKWGDDFGAPDEGYISEQYDRPVFIVNYP-------- 324

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                +  PF M +      +      I    Y       EI  G  R    EV+ Q   
Sbjct: 325 ----TSIKPFYMKKNPDNPKEYLCADVIAPEGY------GEIFGGSEREGNYEVLKQQIL 374

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + G++ E  +          + G  PH G   G +R +  +    ++RE   FP 
Sbjct: 375 DAGLNLEDYQ----WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPR 425


>gi|323453878|gb|EGB09749.1| hypothetical protein AURANDRAFT_71352 [Aureococcus anophagefferens]
          Length = 864

 Score =  167 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 101/283 (35%), Gaps = 28/283 (9%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV-VANPDSACFEIAKSVRSE 68
            +   S VG+   + GW   VR    + FL++ D      +       A  +  K+V + 
Sbjct: 48  AEAPESLVGTRTVIKGWARTVRAQKALGFLEVNDGSSFGGLQCVFEGEAALKELKAVSTG 107

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + ++G +++   +          IEL A+ +E++   EE       ++ +        
Sbjct: 108 CAVAVEGEIVTSGGKQA--------IELKAETLEVVGGCEEGYPLQ--KKRHSLEFLRSI 157

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS---- 184
             L  R +TL      R+ +  +       E F    +PI+TAS  EGA +    +    
Sbjct: 158 AHLRPRTNTLAAAARLRSCLAQATHRFFEQEGFAYVHSPIITASDCEGAGEMFRVTSLSG 217

Query: 185 ----------RVNQGSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                        +  F+A         Q      A      +   P FR E+ ++ R  
Sbjct: 218 DALAKAATKENGFEDDFFARSAFLTVSGQLSAETYACAMGDVYTFGPTFRAENSQTSRHL 277

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
            EF+ ++ EM+F    + ++  E +L+       +       F
Sbjct: 278 AEFWMIEPEMAFATITEAMDNAEALLKSTIAAALDKCGADLKF 320



 Score = 80.9 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 58/172 (33%), Gaps = 29/172 (16%)

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEW----NEEEKKIDFAHN---- 457
            LK+       R  IA+     + + ++      FP  E+      E ++     +    
Sbjct: 345 RLKYADAVDVLRAEIAK-----DPSKWQ------FPDVEFGTDLATEHERWLAETHCGGN 393

Query: 458 -PFTMPQGGMES---LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVG 512
             F            ++ ND     A  +DL+  G  E+  G  R   ++ +       G
Sbjct: 394 CVFVYDYPRTIKSFYMRDNDDGETVA-AFDLLAPGVGELVGGSQREERTDKLEAKMVEFG 452

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +        +       + G  PH G   G DR+V  +   +N+R+   +P 
Sbjct: 453 LDP----EDYWWYLDLRKYGSVPHAGYGLGFDRLVCYVSAIENIRDSIPYPR 500


>gi|227878662|ref|ZP_03996577.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256850385|ref|ZP_05555813.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|312977490|ref|ZP_07789238.1| asparagine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|227861726|gb|EEJ69330.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256712782|gb|EEU27775.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|310895921|gb|EFQ44987.1| asparagine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 432

 Score =  167 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 73/323 (22%), Positives = 120/323 (37%), Gaps = 34/323 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      F+ AKS+R E 
Sbjct: 10  SSKHVDEEVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFDTAKSLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G V   +             E+    ++++S  E       G +E+       +R
Sbjct: 70  SFYITGTVHEDARSHF-------GYEIQITDLKVVSNNE---GYPIGNKEHGVDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +  +       E FI+   PI   S+PEG          +  
Sbjct: 120 HLWLRSKKPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFDHD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDL 293
           L+  E  L  + ++    N                    NF+R+ YDDAI+       D+
Sbjct: 237 LDIQERYLAYMVKQVLENNEYELKILGRDPEKLRPTTEGNFVRLPYDDAIKMLQDAGRDI 296

Query: 294 RNPIIMH--NVTEHFVHSEFRVF 314
           +        +        +  VF
Sbjct: 297 KWGDDFGAPDEGYISEQYDRPVF 319



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 54/175 (30%), Gaps = 28/175 (16%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEE 449
           +G+       D +K    A         + G  +            +I+++P        
Sbjct: 274 EGNFVRLPYDDAIKMLQDAGR-DIKWGDDFGAPDEGYISEQYDRPVFIVNYP-------- 324

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                +  PF M +      +      I    Y       EI  G  R    E++ Q   
Sbjct: 325 ----TSIKPFYMKKNPDNPKEYLCADVIAPEGY------GEIFGGSEREGNYEILKQQIL 374

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + G++ E  +          + G  PH G   G +R +  +    ++RE   FP 
Sbjct: 375 DAGLNLEDYQ----WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPR 425


>gi|226947851|ref|YP_002802942.1| asparagine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226843596|gb|ACO86262.1| asparagine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 463

 Score =  167 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/432 (17%), Positives = 143/432 (33%), Gaps = 68/432 (15%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWV 70
               +   V+++GWV  VR      F+++ D      V          F+    +     
Sbjct: 13  TEKYMDKEVKINGWVRTVRDSKNFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G+V                 E+ A ++ I   +     P+  +R   E +R     
Sbjct: 73  VEVEGIVQPTPN-------AKQPFEIKATRVSIEGKSSTDY-PLQKKRHTFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++        F+  +TPI+T S  EGA +    + ++   
Sbjct: 124 LRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDLNN 183

Query: 190 -------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+   A      Q      A  F   +   P FR E+  + R   E
Sbjct: 184 IPKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHASE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSN 272
           F+ ++ EM+F E  D L+  E++++ V                            N V++
Sbjct: 244 FWMIEPEMAFAELTDYLDNAEDMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDNVVNS 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           +F RI Y +A+             +   +   TEH  +   ++F K + V    +     
Sbjct: 304 DFKRITYTEAVELLQKSGAKFDYEVEWGIDLQTEHERYLTEQIFKKPVFVTDYPKDI--- 360

Query: 331 AKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR 390
                  +AF  R+N+  ++     L          G    +G   +   +   E     
Sbjct: 361 -------KAFYMRLNDDGKTVAAADLLV-------PGVGEIIGGSQREERLDVLEKRMEE 406

Query: 391 LDMQDGDSCFFI 402
           L++   D  +++
Sbjct: 407 LNLNKEDYWWYL 418



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 24/138 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P        K I      F M        + ND     A    LV    EI 
Sbjct: 349 KPVFVTDYP--------KDIKA----FYM--------RLNDDGKTVAAADLLVPGVGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+ +    + ++K      +       + G   H G   G +RI+M + G
Sbjct: 389 GGSQREERLDVLEKRMEELNLNK----EDYWWYLELRKYGETKHSGYGLGFERILMYITG 444

Query: 553 AKNVREVSLFPMSQNFCD 570
             N+R+V  FP +    +
Sbjct: 445 MTNIRDVIPFPRTPGSAE 462


>gi|317507688|ref|ZP_07965395.1| lysyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254015|gb|EFV13378.1| lysyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 1093

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 64/285 (22%), Positives = 107/285 (37%), Gaps = 10/285 (3%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           + G S  G  VR+SG V R R HGG++F+D+ D  G+ QV+            + R E  
Sbjct: 656 EAGRSRSGRQVRVSGRVLRERDHGGVVFVDLSDSSGVAQVILEERELSPGSLAAFRKEID 715

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L     V +    +      TG   L A    +       PLP           + + R 
Sbjct: 716 LGDLISVDAAPGASR-----TGTASLLATGWRLDGKCLR-PLPDKRRGLTDPEAKVRLRH 769

Query: 131 LDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           ++L  +   +  +  R  ++ ++R ++  E F+E  TP+L         +          
Sbjct: 770 VELMTNPQARRALSVRGSVLRALREQLWGEGFLEVETPVLQRVHGGANAEPFRTHINAYD 829

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  AP+ Y + L+  G +R F+I   FR+E       P EF  L+   +  +   +
Sbjct: 830 MPLYLRIAPELYLKRLLVGGMERVFEIGRVFRNEGVDGTHNP-EFTLLEAYQAHSDYRGM 888

Query: 250 LNTMENVLRGVFEEFSNGNT--VSNNFLRICYDDAIRRYGTDKPD 292
            +  E +LR       N         +  I    A+     D+ D
Sbjct: 889 RDLTEQMLRACARAVGNDGPLAAPGPWPMIPMLTAVSHALGDEVD 933



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 50/157 (31%), Gaps = 28/157 (17%)

Query: 411  SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
              A      + + L  +        +  DFP             + +P T          
Sbjct: 956  WDAGQLLLELYERL--VEHRTTTPTFYSDFPL------------SVSPLTKQHPD----- 996

Query: 471  GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA----FSNVGISKEVVENRFGGLY 526
                      ++DLV  G E+A+     +      +      +                 
Sbjct: 997  ----RPAITQRWDLVIGGMEVATAYSELNDPVEQRRRLQAQSAAAAGGDPEAMELDEDFL 1052

Query: 527  RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A +  MPP GG+  G+DRIVMLL   +N+RE   FP
Sbjct: 1053 EALEYAMPPTGGLGVGVDRIVMLLT-ERNIRETLAFP 1088


>gi|195161006|ref|XP_002021361.1| GL25284 [Drosophila persimilis]
 gi|194118474|gb|EDW40517.1| GL25284 [Drosophila persimilis]
          Length = 517

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 66/340 (19%), Positives = 125/340 (36%), Gaps = 22/340 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  + FL +RD  G  Q V          A  + +E  + + G+
Sbjct: 94  GVRVKIFGWVHRLRRQGKALMFLTLRDGTGFLQCVLTDLLCQTYQALVLSTESSVVLYGI 153

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           + +  +      I  G  EL     E++ +A           E    ++   R + +R +
Sbjct: 154 LKAVPSG----KIAPGGHELHVDYWELIGLAPPGGADAILNEEALPDVQLDNRHIMIRGE 209

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
              K +  R+ ++ + R       + E + P L  +  EG           + +F  L Q
Sbjct: 210 NTSKVLKMRSVVMQAFRDHYFDRGYNEVTPPTLVQTQVEGGSTLFKMQFFGEEAF--LTQ 267

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ--------DD 248
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+          D 
Sbjct: 268 SSQLYLETCLP-ALGDVFTIAQSYRAEQSRTRRHLAEYTHVEAECPFISYDDLLDRLEDL 326

Query: 249 ILNTMENVLRG-----VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + + ++ VL+      V E   +       F R+ Y  AI     +    ++    +   
Sbjct: 327 VCDVVDRVLKSPYGHLVMELNPDFKPPKKPFRRMDYAAAIEWLKKNNV-TKDDGTFYEFG 385

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
           E    +  R  +  ++       + +  K    +R   D+
Sbjct: 386 EDIPEAPERKMTDTINEPILLCRFPVAIKSFYMSRCPEDK 425



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   A   F M +   +      +         L+ N  EI  G +R   SE +L  +  
Sbjct: 408 RFPVAIKSFYMSRCPEDKRLTESVDV-------LLPNVGEIVGGSMRIWDSEELLNGYKR 460

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI        +         G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 461 EGIDPTP----YYWYTDQRIYGTIPHGGYGLGLERFLCWLLNRYHIREVCLYPR 510


>gi|55822784|ref|YP_141225.1| asparaginyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|81820310|sp|Q5M067|SYN_STRT1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|55738769|gb|AAV62410.1| asparaginyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 448

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 73/365 (20%), Positives = 133/365 (36%), Gaps = 47/365 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
              +G  + +  WV      G I FL +RD       V   P+             F+  
Sbjct: 12  PKHIGEEITIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEEGLEKFDTI 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + + G+V                 EL    IE++  +++ P+     +E+  
Sbjct: 72  KHLSQETSIYVTGMVKEDERSKF-------GYELDINDIEVIGKSQDYPITP---KEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                 R L LR          R  II +         FI+  +PIL++++ E + +   
Sbjct: 122 DFLMDNRHLWLRSRKQMAIQQIRNAIIYATYDFFDKNGFIKFDSPILSSNAAEDSTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S
Sbjct: 182 TDYFGTPAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFE----------EFSNGN------TVSNNFLRICYDDAIRRY 286
           F+  D+ L+  E  ++ + +          E    +       ++  F R+ YD+AI   
Sbjct: 239 FLSHDESLDLQEAYVKALIQGAIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEAIDLL 298

Query: 287 G-------TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
                   TD   L +     +  E ++ + F V + +++    ++ + +    G   R 
Sbjct: 299 QAHENDEDTDYEHLEHGDDFGSPHETWISNYFGVPTFVVNYPASFKAFYMKPVPGNPERV 358

Query: 340 FCDRM 344
            C  +
Sbjct: 359 LCADL 363



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ +   E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDDYDALVAKMEELGMDRSEYE----FYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|312379943|gb|EFR26079.1| hypothetical protein AND_08075 [Anopheles darlingi]
          Length = 281

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 81/323 (25%), Positives = 127/323 (39%), Gaps = 54/323 (16%)

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG----GGNR 338
           + R+G+DKPD+R    + NV+      +    S +   +       I AK      GG R
Sbjct: 1   MDRFGSDKPDVRFGYELQNVSTLLSPQDQLAVSDVREQDFRAYAIVIRAKEARQLPGGVR 60

Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398
              D +             Y  + + +       GP+ + L    TEAI  +L ++  D 
Sbjct: 61  KTLDEI--------AKKSNYCKFTMSKITPDWNTGPIVRLLGQSATEAISGKLSLEPDD- 111

Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
                       +     R  + + L   +        ++           K+   AH  
Sbjct: 112 -----------QNMMGRVRLAVYEMLESRS--------VVP----------KRATHAHK- 141

Query: 459 FTMPQG--GMESLK------GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           F+M        S          +L  I++  YDLV NG EI  G IR H SE+  +   +
Sbjct: 142 FSMGDRFSDDASKLADGVPPDAELFKIRSLAYDLVWNGVEIGGGSIRIHRSELQRRVLRD 201

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           V   +    +  G L  A   G PPHGG A G+DR V LL  A ++R+V  FP S +  D
Sbjct: 202 VLNIEH---DHLGHLLDALDSGCPPHGGFAIGLDRYVSLLCSAASIRDVIAFPKSLDGKD 258

Query: 571 LLMGSPSTVSVEQLRELGLRIVE 593
            L  +P  +S E+ R   ++++E
Sbjct: 259 PLSKAPVPISEEEKRIYHIKVIE 281


>gi|291241692|ref|XP_002740746.1| PREDICTED: CG6796-like [Saccoglossus kowalevskii]
          Length = 482

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 107/269 (39%), Gaps = 20/269 (7%)

Query: 14  VSDVGSF---VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
             +VGS    V + GW+  +R H  I F+DIRD   +  +     S    I+  +     
Sbjct: 41  EQNVGSSPADVSVKGWIQSLRSHKDITFIDIRDGSCLQTLQVILPSNV--ISSDLTYGSS 98

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++  S +  +       +E+ A  I ++   +    P+  +  +      +Y  
Sbjct: 99  VEVRGQLLQSSHKGQS-------VEMHATDINMIGTCDSEVYPIKVKTRHSFEYLRQYPH 151

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-- 188
           L  R +     +  R      +       +FI  +TPI+T++  EGA +      +++  
Sbjct: 152 LRCRTNAFGSLLRVRNAATMLIHSYFQDNSFIHINTPIITSNDCEGAGELFKIEVISESE 211

Query: 189 --GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               F+          Q +   MASG  + +   P FR E+ ++ +   EFY ++ E++F
Sbjct: 212 ECKHFFDVPVYLTVSGQLQLEAMASGLSKVYTFGPTFRAENSQTRKHLAEFYMVEAEVAF 271

Query: 244 V-EQDDILNTMENVLRGVFEEFSNGNTVS 271
               +DI+  ME  ++ V           
Sbjct: 272 TQSLEDIMQIMEGCVKCVTNRIIEQCPHE 300



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 24/136 (17%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             ++ D+P                PF             D  +  A    L+    E+  
Sbjct: 369 PVFVTDYP------------ACLKPFYAR-------DNQDSPNTVAAVDLLMPVIGELFG 409

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G +R    +V+        ++ +   + +       + G  PHGG   G +R +  +LG 
Sbjct: 410 GSLREERLDVLQ-----NNLTTQGQASEYEWYLDLRKHGSVPHGGFGMGFERFLQCILGI 464

Query: 554 KNVREVSLFPMSQNFC 569
            N+++   FP   + C
Sbjct: 465 DNIKDTIPFPRFPHSC 480


>gi|331703087|ref|YP_004399774.1| asparagine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|256384162|gb|ACU78732.1| asparagine--tRNA ligase [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|256384994|gb|ACU79563.1| asparagine--tRNA ligase [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|296455315|gb|ADH21550.1| asparagine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
 gi|328801642|emb|CBW53795.1| Asparagine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 454

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 107/273 (39%), Gaps = 18/273 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSE 68
           +     +   V + G V   R    + F+ + D    T +       +  +E A   R  
Sbjct: 8   EQHSELLDKEVEILGRVRSNRQGKFVSFMILNDGTTFTDLQVVYKTKTKGYEQALQARVS 67

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G V+    +         + EL A +IE++  A E       ++E+      + 
Sbjct: 68  SIVKVIGRVVLTPEKQ-------QKFELQADEIELIDQAIEDYPLQ--KKEHTTEYLREI 118

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVN 187
             L  +  T +     R+    ++       NF+   +PI+T++  EGA + FLV +R +
Sbjct: 119 AHLRAKTKTFNAIFKIRSAAAYAIHRFFNERNFVYIHSPIITSNDAEGAGEAFLVTTRED 178

Query: 188 ---QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
              +  F+    +     Q      A  F + +   P FR E+  + +   EF+ ++ E+
Sbjct: 179 ADYEKDFFGKKASLTVSGQLHAEAFAQAFKKVYTFGPTFRAENSNTAKHAAEFWMIEPEV 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           +F +  D +  ++++++ +       N     F
Sbjct: 239 AFADLKDNIQLIQDMVKYIINYIFKHNRRELEF 271



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 8/101 (7%)

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           +K ND     A   DL+  G  E+  G  R    E +++    V I  + +E        
Sbjct: 356 MKQNDDNKTVA-AVDLLVPGIGELVGGSQREDNYEKLIKRCKEVNIDIDQLEWY-----N 409

Query: 528 AFQ-CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +  G     G   G +R+VM + GA N+R+V  FP +  
Sbjct: 410 NLRLYGYYKSAGFGLGFERLVMYITGASNIRDVIPFPRTPK 450


>gi|159041752|ref|YP_001541004.1| lysyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157920587|gb|ABW02014.1| lysyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 493

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/309 (21%), Positives = 118/309 (38%), Gaps = 36/309 (11%)

Query: 2   HRYR-THSCGDLGV---------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           H++  TH+   +                 +R  G V  VR HG   F+DI D     Q+ 
Sbjct: 27  HKFEITHTISQIRELAKKYPISHDPFLKGIRTVGRVANVRRHGKASFVDIFDEGERLQLY 86

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP 111
              +    E+             G V+    +      + G++ L      +L+ A   P
Sbjct: 87  LRVN----ELGDRFEEFHRYVDRGDVIGVEGDLFYT--LKGELTLLVHDYALLAKALLEP 140

Query: 112 LPVFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                  +Y    R+ +R+LD L      + I  R RII ++R  + +  F+E  TPIL 
Sbjct: 141 PDW---SKYTTEWRYTHRYLDFLYNSEARRIIQTRFRIIQAIREFLNSMGFMEVETPILQ 197

Query: 171 ASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
                  A+ F          +Y L  + + Y +  +  GF++ ++I   FR+ED     
Sbjct: 198 PVYGGALAKPFKTHVNALDEDWY-LRISLELYLKRFIIGGFNKVYEIGKVFRNEDIDVYH 256

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN-------------NFLR 276
            P EF  L++  ++ + +DI+   E+++  V  + +  + V                F R
Sbjct: 257 NP-EFTMLELYWAYADYNDIMRLTEDLIHQVAVKVTGKDMVEYPIGEGKVEVKLTTPFRR 315

Query: 277 ICYDDAIRR 285
           +   +A+  
Sbjct: 316 LTMYEALSN 324



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 60/158 (37%), Gaps = 27/158 (17%)

Query: 416 ARNHIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            R  + ++L   ++     +  +I D+P     +E   +   H                 
Sbjct: 355 VRGLMIEKLFDKLVAPKLIQPTFITDYP-----QETTPLCKPHR---------------- 393

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                  +++L   G E+A+     +  ++  + F           E           A 
Sbjct: 394 SKPGLIERFELYIAGMELANAYTELNDPQLQHKFFEEEAERFKGGDEEAHPYDYDFVLAL 453

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             GMPP GG+  GIDR+VM+L G  +++EV  FPM ++
Sbjct: 454 SYGMPPTGGLGIGIDRLVMVLTGQYSIKEVIPFPMVKH 491


>gi|326334559|ref|ZP_08200770.1| asparagine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325693328|gb|EGD35256.1| asparagine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 474

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 106/274 (38%), Gaps = 30/274 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           + L GWV   R +    F+ + D   I   QVV + +    ++ K + +   + ++G V+
Sbjct: 16  ITLKGWVRTFRSNR---FIALNDGSTIENIQVVVDFEHTDEQLLKRITTGAAIEVNGKVV 72

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               +          IE+ A +I IL        P+  +R   E +R +   L +R +  
Sbjct: 73  ESQGKGQT-------IEVQASQITILGDCNPDEYPIQPKRHSLEFLR-ENAHLRVRTNVF 124

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----------- 187
              +  R+ +  ++   +    F   +TPI+T S  EGA +    + ++           
Sbjct: 125 GAIMRVRSTLAYAIHRYLQDHGFFYVNTPIITGSDAEGAGEMFRVTTLDAKNPPLTTEGE 184

Query: 188 ---QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
              +  F+          Q +    A    + +   P FR E+  + R   EF+ ++ EM
Sbjct: 185 VDYKKDFFGRETNLTVSGQLEGETFAMSLGKIYTFGPTFRAENSNTSRHLAEFWMIEPEM 244

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +F +  D +N  E+ ++ V             FL
Sbjct: 245 AFYDLIDNMNLAEDFIKEVLRYTLEVRRDDIEFL 278



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 14/118 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M          +D  +++A   D++  G  EI  G  R    EV+ +  +
Sbjct: 366 DYPAKIKAFYMR-------LNDDGKTVRAM--DILFPGIGEIVGGSQREERYEVLKKKIA 416

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           ++G+ +  +           + G   H G   G +R+V+   G  N+R+V  +P +  
Sbjct: 417 DLGMKEADLW----WYLDLRKFGTAVHSGFGLGFERLVLFTTGMSNIRDVIPYPRTPQ 470


>gi|330797835|ref|XP_003286963.1| hypothetical protein DICPUDRAFT_31743 [Dictyostelium purpureum]
 gi|325083055|gb|EGC36518.1| hypothetical protein DICPUDRAFT_31743 [Dictyostelium purpureum]
          Length = 506

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 86/414 (20%), Positives = 149/414 (35%), Gaps = 67/414 (16%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC----FEIA 62
           S G L  S VG  V +   +   R  G  + FL +R+     Q V      C     + A
Sbjct: 14  SIGSLDESKVGQKVLIRARIATSRLQGANLCFLQLREKLFTVQAVIAKGGVCSKSMVKFA 73

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----- 117
             +  E ++ I+G +        +A      +EL    + ++S A++LP+ +        
Sbjct: 74  GDITRESIVDIEGTISKTQVPIESATQKN--VELHVTSLFVVSEAQQLPILLEDLSRNQA 131

Query: 118 ---------------------------------------REYPESIRFKYRFLDLRRDTL 138
                                                       S R + R+LDLR    
Sbjct: 132 LLDQQDSEINEISRLLENTSLTNEEKEELTAKKSAASRYVNVGLSQRLQNRYLDLRVPAN 191

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                 ++ +    R  + A++F E  +P + +++ E           N  ++ A  Q+P
Sbjct: 192 LSIFRIQSAVCALFREFLSAKDFTEIHSPKIISTASESGASVFKLGYFNTHAYLA--QSP 249

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257
           Q YKQ+ +AS FDR F+IAP FR E+  + R   EF  LDMEM+F +   ++L+T++ ++
Sbjct: 250 QFYKQMAIASDFDRVFEIAPVFRAENSNTHRHLTEFVGLDMEMAFKDHYHEVLDTLDEMM 309

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII-----MHNVTEHFVHSEFR 312
             +F+   +          I        +    P  R         +    E      + 
Sbjct: 310 CFIFKGLESRFNKELET--INGQYPFEPFKFTYPSPRFTFDEAAKFLAEEAELLKDETYI 367

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ------GQPGLAYIF 360
           V +   S     ++  I  K  G +    D+ +   R          PGLA  +
Sbjct: 368 VQNNDFSTRQEKKLGQIIKKKFGVDFFIVDKFHTEVRPFYTMPDPNNPGLANAY 421


>gi|256843258|ref|ZP_05548746.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|293380922|ref|ZP_06626956.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|256614678|gb|EEU19879.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|290922497|gb|EFD99465.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 432

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 73/323 (22%), Positives = 120/323 (37%), Gaps = 34/323 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      F+ AKS+R E 
Sbjct: 10  SSKHVDEEVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFDAAKSLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G V   +             E+    ++++S  E       G +E+       +R
Sbjct: 70  SFYITGTVHEDARSHF-------GYEIQITDLKVVSNNE---GYPIGNKEHGVDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +  +       E FI+   PI   S+PEG          +  
Sbjct: 120 HLWLRSKKPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFDHD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDL 293
           L+  E  L  + ++    N                    NF+R+ YDDAI+       D+
Sbjct: 237 LDIQERYLAYMVKQVLENNEYELKILGRDPEKLRPTTEGNFVRLPYDDAIKMLQDAGRDI 296

Query: 294 RNPIIMH--NVTEHFVHSEFRVF 314
           +        +        +  VF
Sbjct: 297 KWGDDFGAPDEGYISEQYDRPVF 319



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 54/175 (30%), Gaps = 28/175 (16%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEE 449
           +G+       D +K    A         + G  +            +I+++P        
Sbjct: 274 EGNFVRLPYDDAIKMLQDAGR-DIKWGDDFGAPDEGYISEQYDRPVFIVNYP-------- 324

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                +  PF M +      +      I    Y       EI  G  R    E++ Q   
Sbjct: 325 ----TSIKPFYMKKNPDNPKEYLCADVIAPEGY------GEIFGGSEREGNYEILKQQIL 374

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + G++ E  +          + G  PH G   G +R +  +    ++RE   FP 
Sbjct: 375 DAGLNLEDYQ----WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPR 425


>gi|109108077|ref|XP_001094498.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           [Macaca mulatta]
          Length = 477

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 108/257 (42%), Gaps = 18/257 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  +++ GW+  VR     +FL + D   +  +    DS+    ++ +     + I G +
Sbjct: 41  GERIKVQGWIRSVRSQKEFLFLHVNDGSSLESLQIVADSSL--DSRELTFGSSVEIQGQL 98

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +   ++  N       +EL A+KI+I+   +    P+  +  +P     +Y     R + 
Sbjct: 99  VKSPSKRQN-------VELKAEKIKIIGNCDAKAFPIKYKERHPLEYLRQYPHFRCRTNV 151

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-----RVNQGSFY 192
           L   +  R+    ++        F+   TPI+T++  EGA +          +V + +F+
Sbjct: 152 LGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLKVPEENFF 211

Query: 193 ---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
              A      Q    +M+  F + F   P FR E+ +S R   EFY ++ E+SFV    D
Sbjct: 212 NVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEISFVNSLQD 271

Query: 249 ILNTMENVLRGVFEEFS 265
           ++  +E + +       
Sbjct: 272 LMQVIEELFKATAMMVL 288



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 25/137 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             +I+++P             A  PF M                 A   DL+  G  E+ 
Sbjct: 363 PVFIINYPL------------AIKPFYMRDNED------GPQHTVA-AVDLLVPGVGELF 403

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            GG+R      + +  +  G+++      +       + G  PHGG   G +R +  +LG
Sbjct: 404 GGGLREERYHFLEERLARSGLTEV-----YQWYLDLRRFGSVPHGGFGMGFERYLQCILG 458

Query: 553 AKNVREVSLFPMSQNFC 569
             N+++V  FP   + C
Sbjct: 459 VDNIKDVIPFPRFPHSC 475


>gi|83319783|ref|YP_424778.1| lysyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
 gi|123767562|sp|Q2SR35|SYK_MYCCT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|83283669|gb|ABC01601.1| lysyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 500

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 53/289 (18%), Positives = 119/289 (41%), Gaps = 11/289 (3%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFE 60
            +Y+ +S  +L ++     V ++G +   R  G    F++I D     Q+    D    E
Sbjct: 45  EKYKDYSKEEL-LNLTQELVIVAGRIKLYREAGKKAAFVNIDDQDSSIQLYVRLDEIGQE 103

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             +  R   +  I G+      +        G++ +  +++ +LS A           + 
Sbjct: 104 AFEDFRDLDLGDIIGV------KGNMMRTDHGELSIRCKEVVLLSKALRPLPDKHAGIQD 157

Query: 121 PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
            E   ++ R++DL  +  + K    RT+II +M+  +    ++E  TPIL +     +  
Sbjct: 158 IEEK-YRRRYVDLIMNHDVRKTFQARTKIIRTMQNFLDNRGYMEVETPILHSLKGGASAK 216

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
             V       +   L  A + + + L+  GF+  ++I   FR+E   +   P EF  +++
Sbjct: 217 PFVTHYNVLNTDVYLRIATELHLKRLIVGGFEGVYEIGRIFRNEGMSTRHNP-EFTSIEL 275

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
            +++ +   +++  E + R      ++ + +  N ++I      +R   
Sbjct: 276 YVAYEDMFFLMDLTEEIFRVCNSAVNSSSVIEYNNVKIDLSKPFKRLHM 324



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGL 525
           K N        +++L   G E A+     +      + F      +    +   +     
Sbjct: 397 KSNPNDPRFTDRFELFIIGREYANAFSELNDPIDQYERFKAQLEEESKGNDEANDMDIDF 456

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A +  MPP  GI  GIDR+VMLL    ++++V LFP  +
Sbjct: 457 VEALEHAMPPTAGIGIGIDRLVMLLTNCDSIKDVLLFPQMK 497


>gi|195398059|ref|XP_002057642.1| GJ17991 [Drosophila virilis]
 gi|194141296|gb|EDW57715.1| GJ17991 [Drosophila virilis]
          Length = 558

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 67/349 (19%), Positives = 130/349 (37%), Gaps = 23/349 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G     + V++ GWVHR+R  G  ++F+ +RD  G  Q V N        A  + +E  +
Sbjct: 130 GTEQRNTRVKIYGWVHRLRRQGKSLMFITLRDGTGFLQCVLNDLLCQTYEALMLSTESTV 189

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  EL+    E++ +A           E    ++   R +
Sbjct: 190 LLYGTLRLLPEG----KTAPGGHELNVDYWELIGLAPPGGADAILNEEAHPDVQLDNRHI 245

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R+ ++ + R   I   + E + P L  +  EG           + ++
Sbjct: 246 MIRGENTSKVLKMRSVVMQAFRGHYIERGYNEVTPPTLVQTQVEGGSTLFKMQYFGEEAY 305

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ----- 246
             L Q+ Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+       
Sbjct: 306 --LTQSSQLYLETCLP-ALGDVFTIAQSYRAEQSRTRRHLAEYTHIEAECPFITFDDLLD 362

Query: 247 ---DDILNTMENVLR----GVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              D + + ++ VL+     + +E + +       F R+ Y DAI+    +     +   
Sbjct: 363 RLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPKKPFRRMPYADAIKWLKENNVPKEDG-T 421

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
            +   E    +  R  +  ++       +    K    +R   D R+ E
Sbjct: 422 FYEFGEDIPEAPERKMTDTINEPILLIKFPAEIKSFYMSRCKDDQRLTE 470



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K       F M +   +      +         L+ N  EI  G +R + S  +++ +  
Sbjct: 449 KFPAEIKSFYMSRCKDDQRLTESVDV-------LLPNVGEIVGGSMRIYDSAELMKGYER 501

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI  +     +         G  PHGG   G++R +  LL   ++R+V L+P 
Sbjct: 502 EGIDPKP----YYWYTDQRVYGTMPHGGYGLGLERFLCWLLNRYHIRDVCLYPR 551


>gi|146304908|ref|YP_001192224.1| lysyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|145703158|gb|ABP96300.1| lysyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 496

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 59/299 (19%), Positives = 116/299 (38%), Gaps = 14/299 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           VR +G V  +R HG   F+DI D     Q+    +    E+       + +   G ++  
Sbjct: 57  VRTAGRVANLRRHGKASFVDIFDDGEKLQLYLRVN----ELGDKYEYFFKVVDRGDIIGI 112

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139
             +        G++ L  +   +L+ +   P             R+ +R++D L  D   
Sbjct: 113 QGDLFFT--AKGELTLLVKDFAMLAKSLIEPPDWST---MSPEFRYSHRYVDFLYNDNAR 167

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
           + +  R +II  +R  +  E FIE  TPIL        AR F          +Y L  + 
Sbjct: 168 RFMETRFKIIREIRNILGEEGFIEVETPILQPVYGGALARPFKSHVNYLNEDWY-LRISL 226

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y +  +  GF++ F+I   FR+ED      P EF  +++  ++ + +DI++  E + +
Sbjct: 227 ELYLKRFIVGGFNKVFEIGKVFRNEDIDVTHNP-EFTLMELYWAYADYNDIMDLTERLFK 285

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGT-DKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
            + +   +   +         +  +  +      D  +  +  NV E        +  +
Sbjct: 286 QLADRVLHSTKIPYKVGEKTVEINLESFRRVSMYDSLSEALGKNVEEMTDDQLKELMQR 344



 Score = 90.5 bits (223), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 27/189 (14%)

Query: 385 EAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL--GIINCNCFEFCWIMDFPF 442
           EA+   ++    D    +          +   R  + ++L   ++  +  +  ++ D+P 
Sbjct: 324 EALGKNVEEMTDDQLKELMQRNGLVPRGSLYIRGLMIEKLFDKLVTPSLVQPTFVTDYPI 383

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
                E   +   H                        +++L   G E A+     +   
Sbjct: 384 -----ETTPLCKPHR----------------NKPGLVERFELYIAGVEFANAYTELNDPI 422

Query: 503 VMLQAFSN----VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
           +  + F      +    +           A   GMPP GG+  GIDR+VML    ++++E
Sbjct: 423 LQDKLFREEQDMMKRGDQEAHPYDKDFINALSYGMPPTGGLGIGIDRLVMLFTNNQSIKE 482

Query: 559 VSLFPMSQN 567
           V  FPM  +
Sbjct: 483 VIPFPMVSS 491


>gi|294877918|ref|XP_002768192.1| asparaginyl-tRNA synthetase, putative [Perkinsus marinus ATCC
           50983]
 gi|239870389|gb|EER00910.1| asparaginyl-tRNA synthetase, putative [Perkinsus marinus ATCC
           50983]
          Length = 745

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 56/313 (17%), Positives = 111/313 (35%), Gaps = 44/313 (14%)

Query: 1   MHRY------RTHSCGDLGVSD-----VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGIT 48
           +H Y      RT     L  +D     +G  V + GWV   R  G G  F++I D   + 
Sbjct: 250 IHPYSSCVGGRTRVKDILLRTDGGAGLIGKTVSVCGWVRTKRSQGSGFAFVEISDGSCLQ 309

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQK---IEILS 105
            +    DS+C +   ++         G  +      + +      +ELS ++   I+++ 
Sbjct: 310 GLQLVLDSSCPDFEGAIGQIA----TGASIQAIGSLVASPAKGQAVELSVRESGKIKVIG 365

Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
             +    P+  ++   E +R +   L  R + +      R+ +  ++    ++ +F    
Sbjct: 366 GVDSAAYPLAKKQHSREFLR-EIAHLRPRTNLIGAVARVRSSLSGAVHAFFMSRDFKYVH 424

Query: 166 TPILTASSPEGARDFLVPSRVNQG---------------------SFYALPQ---APQQY 201
           TP++T++  EGA +    + + Q                       F+  P       Q 
Sbjct: 425 TPLITSADCEGAGEMFQVTSLLQKAEGAHQDVKVDPKTGRFDYKQDFFGRPTYLTVSGQL 484

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
                A      +   PCFR E+  + R   EF+ ++ E+ F +  D +   E  ++   
Sbjct: 485 NVENYACALSDVYTFGPCFRAENSHTSRHLAEFWMIEPELCFADIHDNMKCAEEFIQHCA 544

Query: 262 EEFSNGNTVSNNF 274
                       F
Sbjct: 545 RHVLAHCREDIAF 557



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 10/120 (8%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSN 510
              A   F M     E               D++     E+  G +R    +V+ +  S+
Sbjct: 634 YPAAIKAFYMRANADEE-----PSKQTVAAMDILAPLVGEVCGGSVREERLDVLDKKLSD 688

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           + +    +E+ +       + G  PH G   G +R++M++ G +N+R+V  +P     C+
Sbjct: 689 LNM---DIEDYW-WYRDLRRFGSVPHAGFGIGFERLIMMMTGVENIRDVIPYPRYPGRCE 744


>gi|160914297|ref|ZP_02076516.1| hypothetical protein EUBDOL_00305 [Eubacterium dolichum DSM 3991]
 gi|158433770|gb|EDP12059.1| hypothetical protein EUBDOL_00305 [Eubacterium dolichum DSM 3991]
          Length = 482

 Score =  167 bits (424), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 55/364 (15%), Positives = 122/364 (33%), Gaps = 44/364 (12%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCI 73
           D   +V+L GW+   R  G + F+++ D       Q+V   +   F   +   +   + I
Sbjct: 45  DSMEYVQLQGWIRTNRCSGKLGFIELNDGTYFRNAQLVYMQELKNFSEVEKYPTGAAVTI 104

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +                 E+   +  +    +        ++ +      +   L  
Sbjct: 105 TGKLKLTPQGKQP-------FEIVVTEAVLEGDCDRDYPLQ--KKRHSFEYMREIPHLRP 155

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----QG 189
           R +T +     R+ +  ++      + F+   TPI+T +  EGA +    + ++    + 
Sbjct: 156 RANTFYAIFRLRSVLSMAIHEFFQDQGFVYVHTPIITGNDGEGAGEMFRATTIDNTEFEN 215

Query: 190 SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+          Q      A  F   +   P FR E+  + R   EF+ ++ E++F + 
Sbjct: 216 DFFGKESFLTVTGQLHVEAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMIEPEIAFADL 275

Query: 247 DDILNTMENVLRGVFEEFSNG---------------------NTVSNNFLRICYDDAIRR 285
           +D +N +E++++   +                              + F R+ Y +AI  
Sbjct: 276 EDNMNLIEDMIKYCIDYVLENAPEEMKFFNSMIDKECIARIAKVRDSEFKRMTYSEAIEL 335

Query: 286 YGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKIL---SVNPGYEVWAIPAKGGGGNRAF 340
                    N +   M   +EH  +   ++    +         + + +         A 
Sbjct: 336 LKQADVKFENKVEWGMDLNSEHERYICEKIIDGPVFLTDYPKDIKAFYMRLNDDNQTVAA 395

Query: 341 CDRM 344
           CD +
Sbjct: 396 CDLL 399



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 60/398 (15%), Positives = 118/398 (29%), Gaps = 44/398 (11%)

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ---LDMEMSFVE 245
           G     PQ  Q ++ ++  +  +       C RD   +  R   E+ +        +   
Sbjct: 106 GKLKLTPQGKQPFEIVVTEAVLE-----GDCDRDYPLQKKRHSFEYMREIPHLRPRAN-T 159

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD------AIRRYGTDKPDLRNPIIM 299
              I      +   + E F +   V  +   I  +D        R    D  +  N    
Sbjct: 160 FYAIFRLRSVLSMAIHEFFQDQGFVYVHTPIITGNDGEGAGEMFRATTIDNTEFENDFFG 219

Query: 300 HN-----VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQP 354
                    +  V +    F  + +  P +                 +    +A  +   
Sbjct: 220 KESFLTVTGQLHVEAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMIEPEIAFADLEDNM 279

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCF--FIAGDPLKFCSF 412
            L     +      +       K  N +  +    R+  +  DS F      + ++    
Sbjct: 280 NLIEDMIKYCIDYVLENAPEEMKFFNSMIDKECIARI-AKVRDSEFKRMTYSEAIELLKQ 338

Query: 413 AA-DARNHIAQELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           A     N +   + + + +  +    I+D P +  +            F M         
Sbjct: 339 ADVKFENKVEWGMDLNSEHERYICEKIIDGPVFLTD-----YPKDIKAFYMRLNDDNQTV 393

Query: 471 GNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
                       DL+  G  E+  G  R    +V+ +  S +G++K    +         
Sbjct: 394 A---------ACDLLVPGVGELVGGSQREERYDVLDKRMSEMGMTK----DNLQWYMDLR 440

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + G   H G   G DR++M L G +N+R+V  FP +  
Sbjct: 441 RFGGCRHAGFGLGFDRLLMYLTGMQNIRDVEPFPRTPR 478


>gi|309774843|ref|ZP_07669864.1| asparagine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308917401|gb|EFP63120.1| asparagine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 460

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 59/366 (16%), Positives = 128/366 (34%), Gaps = 44/366 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVL 71
             D   +V+L GW+   R  G + F+++ D       Q+V   +   F   +   +   +
Sbjct: 21  EQDSMEYVQLQGWIRTNRCSGKLGFIELNDGTYFRNAQLVYMKELKNFAEVEKYPTGAAI 80

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G  +                E+   +  +    +    P+  +R   E +R +   L
Sbjct: 81  TVTGKFVLTPQGKQP-------FEIQVTEATLEGDCDRDY-PLQKKRHSFEYLR-EIAHL 131

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR----VN 187
             R ++ +     R+ +  ++      + F+   TPI+T +  EGA +    +       
Sbjct: 132 RPRANSFYAIFRLRSVLSMAIHEFFQDQGFVYVHTPIITGNDGEGAGEMFKATTREDADY 191

Query: 188 QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           +  F+   A      Q      A  F   +   P FR E+  + R   EF+ ++ E++F 
Sbjct: 192 EQDFFGKEAFLTVTGQLHVEAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMIEPEIAFA 251

Query: 245 EQDDILNTMENVLRGVFEEFSNG---------------------NTVSNNFLRICYDDAI 283
           + +D +N +E++++   +                             +++F R+ Y +AI
Sbjct: 252 DLEDDMNLIEDMVKYCIDYVLENAPEEMKFFNTMIDKSCIERITKVRNSDFKRMTYTEAI 311

Query: 284 RRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKIL---SVNPGYEVWAIPAKGGGGNR 338
                      N +   M   +EH  +   ++    +         + + +     G   
Sbjct: 312 ELLLQADVKFDNKVEWGMDLNSEHERYICEKIVDGPVFLTDYPKDIKAFYMRVNDDGKTV 371

Query: 339 AFCDRM 344
           A CD +
Sbjct: 372 AACDLL 377



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/398 (14%), Positives = 121/398 (30%), Gaps = 44/398 (11%)

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF-----YQLDMEMSF 243
           G F   PQ  Q ++  +  +  +       C RD   +  R   E+     +      SF
Sbjct: 84  GKFVLTPQGKQPFEIQVTEATLE-----GDCDRDYPLQKKRHSFEYLREIAHLRPRANSF 138

Query: 244 VEQDDILNTMENVLRGVFEE----------FSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
                + + +   +   F++           +  +      +          Y  D    
Sbjct: 139 YAIFRLRSVLSMAIHEFFQDQGFVYVHTPIITGNDGEGAGEMFKATTREDADYEQDF--F 196

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
                +    +  V +    F  + +  P +                 +    +A  +  
Sbjct: 197 GKEAFLTVTGQLHVEAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMIEPEIAFADLEDD 256

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR-LDMQDGDSCFFIAGDPLKFCSF 412
             L     +      +       K  N +  ++   R   +++ D       + ++    
Sbjct: 257 MNLIEDMVKYCIDYVLENAPEEMKFFNTMIDKSCIERITKVRNSDFKRMTYTEAIELLLQ 316

Query: 413 AA-DARNHIAQELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           A     N +   + + + +  +    I+D P +  +            F M        +
Sbjct: 317 ADVKFDNKVEWGMDLNSEHERYICEKIVDGPVFLTD-----YPKDIKAFYM--------R 363

Query: 471 GNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
            ND     A   DL+  G  E+  G  R    +V+ Q    +G++ + ++          
Sbjct: 364 VNDDGKTVA-ACDLLVPGVGELVGGSQREERYDVLEQRMKEMGMTTDSLQ----WYMDLR 418

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + G   H G   G DR++M L G +N+R+V  FP +  
Sbjct: 419 RYGGCKHAGFGLGFDRLLMYLTGMQNIRDVEPFPRTPK 456


>gi|308189610|ref|YP_003922541.1| lysyl-tRNA synthetase [Mycoplasma fermentans JER]
 gi|307624352|gb|ADN68657.1| lysyl-tRNA synthetase [Mycoplasma fermentans JER]
          Length = 488

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 66/325 (20%), Positives = 126/325 (38%), Gaps = 35/325 (10%)

Query: 13  GVSDVGSFVR--LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSE 68
                   V+  +SG +   R      FL ++D  G  QV  N        +I ++    
Sbjct: 50  REELEVKKVKKNISGRLITARGP----FLVLKDRKGTIQVYFNKKENPELTKIVETFDLG 105

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            +L + GL+M            TG++ + AQ I++L+ A + PLP           R+++
Sbjct: 106 DILWVRGLLM---------KTHTGEMTVKAQDIQLLTKALK-PLPDKFHGLTDTEERYRH 155

Query: 129 RFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R+LDL  +   +N  + RT+I+  +R      +++E  TP L       A         +
Sbjct: 156 RYLDLITNPESRNTFIMRTKIVQWIRDYFNKLDYLEAETPFLHDYLSGAAAKPFTTHHNS 215

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               + L  A +   + L+  GF+R +++   FR+E   +   P EF  ++   ++   +
Sbjct: 216 LNQDFVLRIATEIPLKKLVVGGFERVYEMGRIFRNEGYDTTHNP-EFTTIEFYEAYSNVE 274

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
            ++N  E +++ + ++      V+N                 + DL  P    N+ +   
Sbjct: 275 GMMNRTETLIKELCKKIGKSKFVTN---------------GVEVDLSKPFKRVNMIDEVS 319

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAK 332
               + F KI          A   K
Sbjct: 320 KQTGKNFRKITLEEAIEVAKAYKIK 344



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 56/161 (34%), Gaps = 7/161 (4%)

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
             F     +    +A+   I     F    I++   YE   E   I          +   
Sbjct: 324 KNFRKITLEEAIEVAKAYKIKIEKFFTIGHIINA-LYEELVEPTLIQPTFLYGHPIEISP 382

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS----NVGISKEVVENRF 522
            S K +D       + +L  N  E A+           L+ F           +   +  
Sbjct: 383 LSAKSDDPR--FTERAELFINTKEYANMYTELSDPIDQLERFESQLEEKNKGNDEASDID 440

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                A + GMPP GG   GIDR+VMLL    ++R+V LFP
Sbjct: 441 YDFVDALEYGMPPTGGCGIGIDRLVMLLTETDSIRDVLLFP 481


>gi|242212694|ref|XP_002472179.1| predicted protein [Postia placenta Mad-698-R]
 gi|220728737|gb|EED82625.1| predicted protein [Postia placenta Mad-698-R]
          Length = 452

 Score =  167 bits (423), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 74/371 (19%), Positives = 128/371 (34%), Gaps = 36/371 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             VR SGWVHR+R    IIF+ +RD  G  Q V +   A    A ++  E  + + G + 
Sbjct: 35  KRVRTSGWVHRLRDQNKIIFVVLRDGTGYLQCVLSGQVAQTYEALTLTLESTVELVGTLQ 94

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFLDLRRD 136
                        G  EL      +L  +   E         +   SI+   R L +R +
Sbjct: 95  EVPEG----KTAPGGHELIVDYWRVLGASPGGEDAFTNRLNEKSDPSIQADLRHLVVRGE 150

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T    +  R  +++S R  ++A + +E + P +  +  EG           Q +F  L Q
Sbjct: 151 TASAVLKLRAALLSSFRSSLVARDLLEVTPPCMVQTQVEGGATLFKFDYYGQPAF--LTQ 208

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  + S     F +   FR E+  + R   E+  L+ E++F+  DD+++ +E V
Sbjct: 209 SSQLYLETCLPS-LGDVFCVQESFRAENSHTRRHLSEYTHLEAELAFITFDDLMDHIEGV 267

Query: 257 LRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           +    +                 N    +  F R+ Y DAI+                  
Sbjct: 268 ICDTVDRLLENPSSAALIKQLNPNFTAPARPFRRLSYVDAIKWLNEHGIQHE-------- 319

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG--LAYIF 360
                 ++  V           +            R   D +       G P    A+  
Sbjct: 320 ---AEDADGNVIKDESGNAKMVDHAVGDDIAEAAERRMTDILGTPVFLYGFPAELKAFYM 376

Query: 361 WRLDESGNVAG 371
            ++   G    
Sbjct: 377 KKMKREGEEGP 387



 Score = 43.9 bits (102), Expect = 0.075,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 14/109 (12%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGG 495
           I+  P + +             F M +   E     +   +     DL+  G  EI  G 
Sbjct: 357 ILGTPVFLY-----GFPAELKAFYMKKMKREG----EEGPVCTESCDLLMPGVGEIVGGS 407

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
           +R    + +L A+   GI        +       + G   HGG   G++
Sbjct: 408 MRISDMDELLAAYKREGIDPAP----YYWFTDQRKYGTSEHGGYGLGVE 452


>gi|195484386|ref|XP_002090672.1| GE12667 [Drosophila yakuba]
 gi|194176773|gb|EDW90384.1| GE12667 [Drosophila yakuba]
          Length = 558

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 68/349 (19%), Positives = 133/349 (38%), Gaps = 23/349 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G ++  S V++ GWVHR+R  G  +IF+ +RD  G  Q V N        A ++ +E  +
Sbjct: 130 GTANRDSRVKIYGWVHRLRRQGKSLIFITLRDGTGFLQCVLNDQLCQTYDALTLSTESSV 189

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  EL+    E++ +A           E    ++   R +
Sbjct: 190 VLFGTLKLVPEG----KTAPGGHELNVDYWELIGLAPPGGADAILNEEAQPDVQLDNRHI 245

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R+ +  + R    A  + E + P L  +  EG           + ++
Sbjct: 246 MIRGENTSKVLKMRSVVTQAFRAHYEARGYNEVTPPTLVQTQVEGGSTLFKLKYFGEEAY 305

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ----- 246
             L Q+ Q Y +  +       F I+  +R E  R+ R   E+  ++ E  F+       
Sbjct: 306 --LTQSSQLYLETCLP-ALGDVFTISQSYRAEQSRTRRHLAEYSHVEAECPFLTFDDLLD 362

Query: 247 ---DDILNTMENVLR----GVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              D + + ++ VL+     + +E + +       F R+ Y+DAI+    +    ++   
Sbjct: 363 RLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRRMNYEDAIKWLKENNV-TKDDGT 421

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
            +   E    +  R  +  ++       +    K     R   D R+ E
Sbjct: 422 FYEFGEDIPEAPERKMTDTINEPIMLCRFPAEIKSFYMQRCKEDQRLTE 470



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R + SE +L+ ++ 
Sbjct: 449 RFPAEIKSFYMQRCKEDQRLTESVDV-------LLPNVGEIVGGSMRIYDSEELLKGYAR 501

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI  +     +         G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 502 EGIDPKP----YYWYTDQRVYGTMPHGGYGLGLERFLCWLLNRYHIREVCLYPR 551


>gi|320584022|gb|EFW98234.1| aspartyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 557

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 68/285 (23%), Positives = 113/285 (39%), Gaps = 24/285 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPD-----SACFEIAKSV 65
           L   D G  V     VH  R  G  + F   R    + Q +   +         + A S+
Sbjct: 101 LTPQDDGKEVVFRARVHNSRQQGATMSFFLFRQQDELIQGLIKANGDSVSKQMVKWAASL 160

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------ 119
             E ++ + G+V        +A I    +E+S  KI  +S        +  +        
Sbjct: 161 SLESIVLVHGVVKKVDELVKSATI--QDVEISISKIYTISETPAQLPLLIEDASRSDAEA 218

Query: 120 -------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                       R   R +DLR  T       ++ I    +  ++  NF+E  TP L A+
Sbjct: 219 EASGLPVVNLDTRLDSRVIDLRTVTNQAIFRLQSGICQLFKEFLLERNFVETHTPKLIAA 278

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + EG  +          +F A  Q+PQ YKQ L+A+ F+R F+IAP FR E+  + R   
Sbjct: 279 ASEGGANVFKVDYFKGSAFLA--QSPQFYKQQLIAADFERVFEIAPVFRAENSNTHRHMT 336

Query: 233 EFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           EF  LD+EM+   +  ++++ +  +   +F E           +R
Sbjct: 337 EFVGLDLEMAIEEDYHEVVDLLSELFVFIFSELKTRYAKEIATVR 381



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 45/119 (37%), Gaps = 12/119 (10%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF TMP     +          +  YD    G EI SG  R H   ++ +   
Sbjct: 447 KFPLAVRPFYTMPDPEDSNY---------SNSYDFFMRGEEILSGAQRIHDPVLLAERIK 497

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
              +             +AF  G  PH G   G++R++M  L  KN+R  SLFP     
Sbjct: 498 AHDVDTTT--PGLSDYIQAFTYGCAPHAGGGIGLERVLMFFLDLKNIRRASLFPRDPKR 554


>gi|332022079|gb|EGI62404.1| Asparaginyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 516

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 67/346 (19%), Positives = 127/346 (36%), Gaps = 23/346 (6%)

Query: 16  DVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
                V+L GWVHR+R  G  + F+ +RD  G  Q V          A ++ +E  + + 
Sbjct: 91  HRDQRVKLYGWVHRLRRQGKALMFITLRDGTGFLQCVLTDKLCQTYNALTLATEAAVQLF 150

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G++ +            G  ELS    E++  +           E    ++   R + +R
Sbjct: 151 GILKAVPEG----KNAPGDHELSVDYWELVGSSPPGGADSILNEEALPDVQLDNRHIMIR 206

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +   + ++ R+ ++ ++R       + E + P L  +  EG           + +F  L
Sbjct: 207 GENTSRILIMRSILMQAVRDHYKDRGYHEVTPPTLVQTQVEGGSTLFKLDYFGEPAF--L 264

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-------- 246
            Q+ Q Y +  +       + IA  +R E  R+ R   E+  ++ E  F+          
Sbjct: 265 TQSSQLYLETCLP-AMGDVYCIAQSYRAEQSRTRRHLAEYTHIEAECPFITFDDLLDRLE 323

Query: 247 DDILNTMENVLR----GVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           D I + +E VL+     + +E + N       F R+ Y DAI  Y  +    +     + 
Sbjct: 324 DLICDVVERVLKTSLGHLVKELNPNFQIPKKPFKRMNYSDAIE-YLRENNITKEDGSFYE 382

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR-AFCDRMNE 346
             E       R  +  ++       +    K     R    +R+ E
Sbjct: 383 FGEDIPEMPERKMTDAINEPIMLCRFPAEIKSFYMQRCKDDERLTE 428



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R    E +++ +  
Sbjct: 407 RFPAEIKSFYMQRCKDDERLTESVDV-------LLPNVGEIVGGSMRTWDHEELMEGYKR 459

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             I   +    +       + G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 460 ENIDPTL----YYWYTDQRKYGSCPHGGYGLGLERFLCWLLNRYHIREVCLYPR 509


>gi|325192924|emb|CCA27311.1| aspartyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 529

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 63/283 (22%), Positives = 111/283 (39%), Gaps = 25/283 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA----CF 59
            + H+ G L +++ GS V + G++  VR    I FL +R      Q +            
Sbjct: 68  KKYHNIGQLHLAEKGSQVWVRGYLQNVRSKSKIAFLLLRQSMASIQAILTESDQVPRTMI 127

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER- 118
           + A  +  E V  ++ LV   +A+    +     IEL   ++ ++S A         +  
Sbjct: 128 KFASGIPKESV--VEMLVTITAAKQPIVSTSQKDIELQVHQLFLISKAMPELPFQVEDAA 185

Query: 119 --------------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
                         +     R   R LDLR       +  +  +    R  +  + F+E 
Sbjct: 186 RPDALVKAEGSTFADVGLDTRLNTRVLDLRTPANQAIMRIQAGVCRLFREFLDDKGFVEI 245

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA-SGFDRYFQIAPCFRDE 223
            TP L   + E           +Q +   L Q+PQ YKQ+  A  G +R ++I P FR E
Sbjct: 246 HTPKLIGGASESGASVFKLKYFDQEA--CLAQSPQTYKQMACACGGLERVYEIGPVFRAE 303

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFS 265
           +  + R   EF  LD+EM   E   +++    ++   +F+  +
Sbjct: 304 NSNTHRHMCEFVGLDLEMVIQEHYHEVVQLFSDLFIYIFDNLT 346



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 12/119 (10%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
            K   A  PF       E  +        +  YD++  G EI SG  R H ++++     
Sbjct: 420 NKYPLAVRPF-YTMPDSEDTR-------WSNSYDIMIRGEEIVSGAQRVHDAKLLEDRLD 471

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            + + KE ++        AF+ G  PHGG   G++R+VML LG  N+R+ S+FP     
Sbjct: 472 ALNVPKESLKT----YIDAFRLGALPHGGGGIGLERVVMLYLGLGNIRKASMFPRDPKR 526


>gi|315427092|dbj|BAJ48708.1| asparaginyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
 gi|315427123|dbj|BAJ48738.1| asparaginyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 429

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 110/252 (43%), Gaps = 16/252 (6%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV---ANPDSACFEIAKSV 65
           CG +     GS V L GW+   R HG ++F+D+RD  G+ QV    A    A F+   S 
Sbjct: 5   CGRVKSLPDGSEVELRGWIRSKRHHGRLMFIDLRDGTGVVQVTLKAAEVPEADFQAVSSA 64

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  L + G+V+             G  E+ A K+E++S + E      G         
Sbjct: 65  GRESALVVRGVVVHDPR-------APGGAEVKAGKVELVSASLEEFPIKKG---VGPRFL 114

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
             +R L +R       +  R+ ++ S+R     E F+E   P    ++ EG       + 
Sbjct: 115 SDHRHLAIRSPKAAAILRFRSNLLKSIRNWFEREGFVEVHCPTFITAAVEGGATLFEVNY 174

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G    L Q+ Q Y++  + S   + + I P FR E  ++ R   EF+ ++ EM+F  
Sbjct: 175 F--GKKVYLTQSVQFYQEAAIYS-LGKVYSIQPSFRAERSKTRRHLTEFWHVEGEMAFAG 231

Query: 246 QDDILNTMENVL 257
            DD++  +E ++
Sbjct: 232 LDDLMKVVERLV 243



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 55/151 (36%), Gaps = 17/151 (11%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +     +LG          +  D PF+  +  +K   F H P        E     DL
Sbjct: 290 GVQLEWGSDLGADEEKILTMEF--DKPFFLTHFPKKAKAFYHMP---DPANPELTLSADL 344

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
           L+ + +         EI   G R H  + +L      G+     +          + G  
Sbjct: 345 LAPEGYG--------EIVGSGQRIHDYQQLLTRIVEEGLEPSDYK----WYLDLRKYGSV 392

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           PH G   G++R+V  LLG KN+R   +FP +
Sbjct: 393 PHSGFGLGVERLVQWLLGLKNIRSAVMFPRT 423


>gi|227904083|ref|ZP_04021888.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227868102|gb|EEJ75523.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 432

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 74/323 (22%), Positives = 120/323 (37%), Gaps = 34/323 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      F+ AKS+R E 
Sbjct: 10  SSKHVDEEVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVTDEVFQAAKSLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G V   +             E+    ++++S  E       G +E+       +R
Sbjct: 70  SFYITGTVHEDARSHF-------GYEIQITNLKVVSNNE---GYPIGNKEHGVDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +  +       E FI+   PI   S+PEG          N  
Sbjct: 120 HLWLRSKKPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFNND 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDL 293
           L+  E  L  + ++  + N                    NF R+ YDDAI+       D+
Sbjct: 237 LDIQERYLAYMVKQVLDKNEYELKILGRDPEKLRPTTEGNFTRLSYDDAIKMLQDAGRDI 296

Query: 294 RNPIIMH--NVTEHFVHSEFRVF 314
           +        +        +  VF
Sbjct: 297 KWGDDFGAPDEGYISEQYDRPVF 319



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 28/175 (16%)

Query: 395 DGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEE 449
           +G+       D +K    A         + G  +            +I+++P        
Sbjct: 274 EGNFTRLSYDDAIKMLQDAGR-DIKWGDDFGAPDEGYISEQYDRPVFIVNYP-------- 324

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                +  PF M +      +      I    Y       EI  G  R    EV+ Q   
Sbjct: 325 ----TSIKPFYMKKNPDNPKEYLCADVIAPEGY------GEIFGGSEREGNYEVLKQQIE 374

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + G++ E  +          + G  PH G   G +R +  +    ++RE   FP 
Sbjct: 375 DAGLNLEDYQ----WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPR 425


>gi|118795020|ref|XP_321875.3| AGAP001276-PA [Anopheles gambiae str. PEST]
 gi|116116576|gb|EAA01739.3| AGAP001276-PA [Anopheles gambiae str. PEST]
          Length = 474

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 135/385 (35%), Gaps = 70/385 (18%)

Query: 2   HRYRTHSCGDLGVSD--VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           H YR     DL   +   G+ V + GWV  +R   G +F+DI D  G        +    
Sbjct: 18  HYYR---IKDLSPDNCKPGNKVNVKGWVKSIRNMKGNLFVDINDGSGPQNFQLVINK--E 72

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGER 118
           +   +     V     LV S             Q+EL    +  +         P + ++
Sbjct: 73  KAIDTAYGCSVDACGVLVAS----------PKNQLELHVDTLTEVGKCPLTEGYPFYPKK 122

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
            YP      +  L  R +++      R     +    +    F++  TP+LT++  EGA 
Sbjct: 123 SYPPEYIRNHLHLRSRVNSMASTFRVRHEATRAFNEYLQRGGFVQIHTPVLTSNDCEGAG 182

Query: 179 DFL--------------------VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
           +                        +  ++ +F        Q     MA G D+ +   P
Sbjct: 183 EAFLVKPLNEQLLKGMAKENVPLEHAYFDRATFL---TVSGQLHLEAMAHGLDKVYTFGP 239

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSN----------- 266
            FR E+ +S+    EFY L++E +F+   D++ + +E++L+ V +   +           
Sbjct: 240 TFRAENCKSNIHLSEFYMLELEEAFMGTLDELTHRVEDMLKSVTKSVIDRSAADLSVVRK 299

Query: 267 -------------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
                           +   F R+ YD+A+     ++  L++P+      E  ++ E  +
Sbjct: 300 SNSQDGGGQLEDCFRWIDKPFPRLTYDEAMHILQANEAKLKSPVR----REEGINKEQEL 355

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNR 338
           F      +P +      A      R
Sbjct: 356 FLVEHCQSPVFVCLWPKAIKSFYMR 380



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 9/89 (10%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV +  E+  G +R    + + +   N  +                + G     G   G 
Sbjct: 395 LVPHVGELVGGSVREDSYDRLRRKLPNADV--------LQWYLELRKFGSVTTAGFGMGF 446

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
           +R +  LL   NV++V  FP   +   ++
Sbjct: 447 ERYLAWLLNVHNVKDVIPFPRWAH-NCVM 474


>gi|326407318|gb|ADZ64389.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 447

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 73/365 (20%), Positives = 129/365 (35%), Gaps = 47/365 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-----------NPDSACFEIA 62
              VG  V++  WV      G + FL +RD     Q V               +A F+  
Sbjct: 11  KDHVGETVKIGAWVADKSGKGKLQFLQLRDGTAFFQAVVFKPNMIENFGEEEGTAKFDEI 70

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + + G+V   S             EL    +E++  + + P+     +E+  
Sbjct: 71  KHLSQETSVYVTGVVKEDSRSKF-------GYELDVTDLEVIGQSHDYPITP---KEHGV 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                 R L LR       +  R  II +         FI+  +PIL+ ++ E   +   
Sbjct: 121 EFLLDNRHLWLRSKRQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILSGNAAENTTELFE 180

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E  
Sbjct: 181 TDYFGNSAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYP 237

Query: 243 FVEQDDILNTMENVLRGVFEEFSN----------------GNTVSNNFLRICYDDAIRRY 286
           FV  D+ L+  E  ++ + +   +                   +   F R+ YD AI   
Sbjct: 238 FVTHDESLDIQEAYVKALIQGVLDNAAYALETLERDTSMLQKYIDTPFKRVSYDAAIDLL 297

Query: 287 G-------TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
                   TD   + +     +  E ++ + + V   I++    ++ + +    G   R 
Sbjct: 298 QAHENDEDTDYEHVEHGDDFGSPHETWISNYYGVPIFIVNYPASFKAFYMKPVPGNPERV 357

Query: 340 FCDRM 344
            C  +
Sbjct: 358 LCADL 362



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 323 TWISNYYGVPIFIVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 369

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    +++L+  ++ G+  +     +       + G  PH G   G++R+V  
Sbjct: 370 EIIGGSERETDYDLLLKKIADFGLDPKD----YDWYLELRKFGSVPHAGFGLGLERMVTF 425

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G +++RE   FP   N    
Sbjct: 426 VAGTEHIREAIPFPRMINRIQP 447


>gi|256420050|ref|YP_003120703.1| asparaginyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256034958|gb|ACU58502.1| asparaginyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 479

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 104/274 (37%), Gaps = 29/274 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GW+   R +    F+ + D       QVV + +S   E+ K + +   + + G V+
Sbjct: 20  VVVKGWIRSFRNNQ---FIALNDGSTNNNIQVVIDQESVTPELLKRLTTGAAISVSGQVI 76

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               +         ++E+ A ++EIL   +    P+  +         +   L  R +T 
Sbjct: 77  PSMGKG-------QRVEIKAIELEILGDCDPEKYPLQLKNRPSLEYLREIAHLRFRTNTF 129

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----------- 187
                 R  +  ++      + F+   TPI+TAS  EGA +    +  +           
Sbjct: 130 GAIFRLRHALAFAVHKFFNEKGFVYLHTPIITASDAEGAGEMFHVTSFDLKNPPLTESGE 189

Query: 188 ---QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
              +  F+          Q +  L A  F   +   P FR E+  + R   EF+ ++ EM
Sbjct: 190 INYKEDFFGRATNLTVSGQLEGELGAMAFGDIYTFGPTFRAENSNTARHLAEFWMIEPEM 249

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +F + ++ +N  E  ++ V       N     FL
Sbjct: 250 AFYDLEENMNLAEAFIKYVLSYALENNREDLEFL 283



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 26/150 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +  +   + D+P             A   F M Q         D  +++A  
Sbjct: 354 HERYLVEKHFKKPVILTDYP------------KAIKAFYMKQNE-------DGKTVRAM- 393

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            D++  G  EI  G  R    + ++     + +  E +           + G  PH G  
Sbjct: 394 -DILFPGIGEIVGGSQREENYDKLVTRMEEMHLPVEEM----SWYLDTRRFGSAPHAGFG 448

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R+V+   G  N+R+V  FP +    +
Sbjct: 449 LGFERLVLFASGMGNIRDVIPFPRTPKSAE 478


>gi|73984269|ref|XP_856839.1| PREDICTED: similar to Aspartyl-tRNA synthetase (Aspartate--tRNA
           ligase) (AspRS) isoform 4 [Canis familiaris]
          Length = 470

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 81/356 (22%), Positives = 142/356 (39%), Gaps = 47/356 (13%)

Query: 34  GGIIFLDIRDHY----GITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANI 89
           G   FL +R        +  V  +      + A ++  E ++ ++G+V  R       + 
Sbjct: 42  GKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANINKESIVDVEGVV--RKVNQKIGSC 99

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPE-------------SIRFKYRFLDLRRD 136
               +EL  QKI ++S+AE        +   PE               R   R +DLR  
Sbjct: 100 TQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEVEGEEEGRATVNQDTRLDNRVIDLRTS 159

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T       ++ I +  R  +I + F+E  TP + +++ EG  +    S     ++ A  Q
Sbjct: 160 TSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVSYFKNNAYLA--Q 217

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-----DDILN 251
           +PQ YKQ+ + + F++ F I P FR ED  + R   EF  LD+EM+F        ++I +
Sbjct: 218 SPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVVEEIAD 277

Query: 252 TMENVLRGVFEEFS------NGNTVSNNF------LRICYDDAIRRY------GTDKPDL 293
           T+  + +G+ + F       N       F      LR+ Y +A+           D+ DL
Sbjct: 278 TLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLREAGIEMGDEEDL 337

Query: 294 RNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
             P    +  + +    ++F +  K  L+V P Y +          +     R  E
Sbjct: 338 STPNEKLLGRLVKEKYDTDFYILDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEE 393



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 314 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYD----TDFYILD------KY 363

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 364 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 414

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 415 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 470


>gi|50365297|ref|YP_053722.1| asparaginyl-tRNA synthetase [Mesoplasma florum L1]
 gi|59798528|sp|Q6F0Y5|SYN_MESFL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|50363853|gb|AAT75838.1| asparaginyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 454

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 102/267 (38%), Gaps = 18/267 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVLCIDGL 76
             V + G V   R    + F+ + D   +  +     P++  FE     R   ++ I+G+
Sbjct: 16  QKVTIIGRVRSNRQGKAVSFMVLNDGTVLNDLQVVYKPETFGFEQGSKARVSSIVEIEGI 75

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++                E++A  I +L  A E       ++E+      +   L  R  
Sbjct: 76  LIPTP-------TRPQPFEINATSITLLDQAIEEYPLQ--KKEHSPEFLREISHLRARTK 126

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ----GSFY 192
           T       R+    ++       N++  +TPI+T++  EGA +  V +          F+
Sbjct: 127 TFQAIFRIRSTAAFAIHKFFQENNYVYVTTPIITSNDAEGAGEQFVVTVNEDKDYANDFF 186

Query: 193 ALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               +     Q      A  F   +   P FR E+  + +   EF+ ++ E++F + +D 
Sbjct: 187 GKKASLTVSGQLNGEAFAQAFKNIYTFGPTFRAENSHTTKHASEFWMIEPEVAFADINDN 246

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLR 276
           +  M+++L+ V       N     FL+
Sbjct: 247 IQLMQDMLKSVVGYVLEKNMTELEFLQ 273



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 6/100 (6%)

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           +K ND     A   DL+  G  E+  G  R    + +L+     GI+ E ++   G    
Sbjct: 356 MKQNDDGKTVA-AVDLLVPGIGELCGGSEREANLDKILERCEFYGINPEELDWYIGL--- 411

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             + G     G   G +R++M + GA N+R+V  FP +  
Sbjct: 412 -RKYGFYKSAGFGLGFERLIMYITGASNIRDVIPFPRTPK 450


>gi|182416525|ref|ZP_02947952.1| aspartyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669026|ref|ZP_04529010.1| aspartate--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182379597|gb|EDT77079.1| aspartyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657374|gb|EEP54930.1| aspartate--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 429

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 81/355 (22%), Positives = 139/355 (39%), Gaps = 39/355 (10%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V L GWVH++R    + F+ +RD  GI Q+V N      E  K +R E  + + G+V 
Sbjct: 15  EEVLLRGWVHKIRDLAHVSFIMLRDKSGIIQLVCNK-----EQIKGLRLENSVEVRGIVR 69

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVF---GEREYPESIRFKYRFLDLRR 135
                  N   + G IE+    I++        LP      + +     +  YR + LR 
Sbjct: 70  E------NEKALKG-IEIEVSSIDVTGKVYYDKLPFEIQGYKNKVSLETQLDYRTISLRI 122

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
                    +  I  S R    + NF E  TP +  S  EG  +        + +F A  
Sbjct: 123 PKKKAIFKIQNEIEESFRTYFKSNNFEEIHTPKIINSGTEGGSEMFTVDYFGRRAFLA-- 180

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTME 254
           Q+PQ YKQ+++ +GF+R F++   +R E   + R   E+  LD+EM F+ ++ D++N  E
Sbjct: 181 QSPQFYKQMMVGAGFERVFEVGYAYRAELHNTWRHLNEYVSLDVEMGFIKDEKDLMNVEE 240

Query: 255 NVLRGVFEEFSNGN-----------TVSNNFLRICYDDA----IRRYGTDKP----DLRN 295
           + LR +F+                        RI   +A    +R +G   P    D   
Sbjct: 241 DFLRYMFKHVKETCGEELKLFNIELPEKLEIPRIPLAEAQDILLREFGKKSPVGNIDNEG 300

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
             + H   +     +F   +   +      ++A+  +         D + +    
Sbjct: 301 EALFHKYVKETYDCDFVFLTDYPTAKRP--MYAMECEDNNEMTKSFDLIYKGVEI 353



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 24/136 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++ D+P             A  P    +            +     +DL+  G EI 
Sbjct: 315 DFVFLTDYP------------TAKRPMYAMECED--------NNEMTKSFDLIYKGVEIT 354

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H  E++ +     G+        F      F+ GMPPHGG A G++RI M +L 
Sbjct: 355 TGGQRIHDYEMLKEKMERWGLKL----EDFAFYLDTFKYGMPPHGGFAIGLERITMQMLD 410

Query: 553 AKNVREVSLFPMSQNF 568
             N+RE SLFP     
Sbjct: 411 LGNIREASLFPRDMKR 426


>gi|330470480|ref|YP_004408223.1| lysyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328813451|gb|AEB47623.1| lysyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 502

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 60/265 (22%), Positives = 111/265 (41%), Gaps = 20/265 (7%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD 55
           RT S  ++          +  G  V ++G V  VR  G + F  +RD  G   Q + + D
Sbjct: 43  RTSSLAEVRERYAELPTDTATGDRVSVTGRVIFVRNTGKLCFATLRDGDGTELQAMLSLD 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                 A+ +     L   G ++  + E I +    G++ + A++  + + A        
Sbjct: 103 RVG---AERLDDWKRLIDLGDLVGITGEVITSR--RGELSVLAEEWAVTAKALRPLP--V 155

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +   E  R + R++DL      + +V+ R   + S+R  +  + FIE  TP+L     
Sbjct: 156 AHKPLSEEARVRQRYVDLIVRPQARQMVRTRAAAVRSLRDLLHDKGFIEVETPMLQLLHG 215

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  G +R F+I   FR+E   S   P E
Sbjct: 216 GAAARPFVTHSNALDTDLY-LRIAPELFLKRAVVGGVERVFEINRNFRNEGIDSSHSP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLR 258
           F  L+   ++ + + +     N+++
Sbjct: 274 FAMLEAYQAYGDYNTMAELTRNLIQ 298



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 56/151 (37%), Gaps = 28/151 (18%)

Query: 419 HIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +A+EL   ++        ++ D+P     EE   +   H                    
Sbjct: 369 KLAEELFEELVVPGLQAPTFVRDYP-----EETSPLTRGHR----------------SEP 407

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
             A ++DL   GFE+A+         V  +            ++          RA + G
Sbjct: 408 GVAEKWDLYVFGFELATAYSELVDPVVQRERLLAQAQLAARGDDEAMRLDEDFLRAMEYG 467

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP GG+  GIDR++M L G   +RE  LFP
Sbjct: 468 MPPAGGMGMGIDRLLMALTGLG-IRETILFP 497


>gi|320162942|gb|EFW39841.1| asparaginyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 864

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 57/287 (19%), Positives = 112/287 (39%), Gaps = 33/287 (11%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L   + G  V +SGWV  VR    + F ++ D   +  +            K + +   +
Sbjct: 414 LVEGNAGDHVVVSGWVRSVRAQKSVSFAELSDGSTLKSIQIVLKPGQE---KDIATGACI 470

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +++   +          +E+ A +I +L  +++   P+  +R   E +R     L
Sbjct: 471 KVTGKLVASPGQGQA-------LEIDASEIVVLGTSDQTDYPLQKKRHTNEFLR-DIAHL 522

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR------ 185
             R ++    +  R  +  ++      ++F+  +TPI+T+S  EGA              
Sbjct: 523 RARTNSGGAILRVRNALTMAIHRHFQDKDFLNVNTPIITSSDCEGAGSLFRLETSPAAAV 582

Query: 186 -----------VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                          SF+   A      Q     +ASG  R + + P FR E+  + R  
Sbjct: 583 GADAAAASQPPAPHESFFGHPAYLTCSGQLHAEAVASGMSRVYVLGPTFRAENSHTKRHM 642

Query: 232 GEFYQLDMEMSFVE-QDDILNTMENVLRGVFEE-FSNGNTVSNNFLR 276
            EFY L+ E  F++  D++L+   + ++ +     S  +    +F R
Sbjct: 643 AEFYMLEAEQFFIDQMDELLDLTSDCVKDLTATIVSKCSDDLAHFQR 689



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 27/138 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              +I D+P             A  PF M        +  D  ++ A   DL+  G  E+
Sbjct: 751 RPVFITDYP------------AAIKPFYMR-------RNMDNKTVAAM--DLLVPGIGEL 789

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R   + V++Q   +  +       +        + G  PHGG   G +R++M L 
Sbjct: 790 VGGSLREERASVLMQIMRSHQMLP-----QMQWYLDLRRYGTAPHGGFGMGFERLMMYLT 844

Query: 552 GAKNVREVSLFPMSQNFC 569
           G +NVR+   FP +   C
Sbjct: 845 GTENVRDTIPFPRTAGQC 862


>gi|150014968|ref|YP_001307222.1| asparaginyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|226695284|sp|A6LPI6|SYN_CLOB8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|149901433|gb|ABR32266.1| asparaginyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 464

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 117/351 (33%), Gaps = 51/351 (14%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             + +SGW+  +R      F+++ D       QVV +     F+    +     + + G+
Sbjct: 20  KEITISGWIRTLRSSNAFGFIEVNDGSFFKNIQVVFDDKLNNFKEISKLPISSSISVIGI 79

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +++               E+ A+ I I  ++     P+  +R   E +R     L  R +
Sbjct: 80  LVATPE-------AKQPFEIQAKNIIIEGMSNSDY-PLQKKRHTFEYLR-TIAHLRPRSN 130

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------- 189
                   R+    ++      +NF+   TPI+T S  EGA +    + ++         
Sbjct: 131 AFAATFRVRSVAAYAIHKFFQDQNFVYTHTPIITGSDCEGAGEMFRVTTLDPKTPELSKD 190

Query: 190 -------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+          Q      A  F   +   P FR E+  + R   EF+ ++ 
Sbjct: 191 GSVDFSKDFFGKETNLTVSGQLNAECFALAFRNIYTFGPTFRAENSNTTRHAAEFWMIEP 250

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RIC 278
           E++F +  D +   EN+L+ V +   +       F                      ++ 
Sbjct: 251 EIAFADLQDDMELAENMLKYVIKYVMDECPEELEFFNQFVDKGLLERLNHVVSSDFAKVT 310

Query: 279 YDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           Y +A+             +   +   TEH  +     F K L V    +  
Sbjct: 311 YTEAVEILQKCGKKFDYDVSWGIDLQTEHERYLTEEHFKKPLFVTDYPKDI 361



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 56/146 (38%), Gaps = 26/146 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  ++ D+P        K I      F M          +D  ++ A  
Sbjct: 339 HERYLTEEHFKKPLFVTDYP--------KDIKA----FYMR-------LNDDGKTVAAT- 378

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  EI  G  R    +V+    + + +S    E+ +       + G   H G  
Sbjct: 379 -DLLVPGIGEIIGGSQREERLDVLKDRMTELNLS----EDDYWWYLELRKYGETKHAGFG 433

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G +R++M + G  N+R+V  FP + 
Sbjct: 434 LGFERLIMYITGMTNIRDVVPFPRTP 459


>gi|302874889|ref|YP_003843522.1| aspartyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307690494|ref|ZP_07632940.1| aspartyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302577746|gb|ADL51758.1| aspartyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 429

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 73/308 (23%), Positives = 139/308 (45%), Gaps = 32/308 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT+ C     ++V   V+  GWVH++   G I F+ +RD  GI Q++ +      E +K 
Sbjct: 3   RTYVCDIEKKAEVNILVK--GWVHKIHDLGQISFVHLRDKTGIVQLILDK-----ETSKD 55

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF---GEREYP 121
           ++ E  + + G       +T+      G IE+    I+++       LP+     +++  
Sbjct: 56  LKLEMAIEVCG-------KTVLNEKAPGGIEVLPDDIKVVGKTFYETLPIEVNAYKQKAS 108

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              +   R L L+          +  I N+ R  + A+ F E  TP + +SS EG  +  
Sbjct: 109 LEKQLDNRCLSLKAPKTRAIFKVQEEIANAFRNFLTAQRFSEVRTPKIISSSTEGGSEMF 168

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + +F  L Q+PQ YKQ+++ +GF+R F+I   +R E   + R   E+  LD+EM
Sbjct: 169 TVDYFGRRAF--LTQSPQFYKQMMVGAGFERVFEIGFAYRAELHNTWRHLNEYVSLDVEM 226

Query: 242 SFV-EQDDILNTMENVLRGVFEEFSNGNTVSN-----------NFLRICYDDAIRRYGTD 289
            F+ +++++++  E ++  +++                        R+   +A      D
Sbjct: 227 GFIEDENELMDLEEALINHIYDHLRKTCARELEIFKVELPEKVEIPRMPLPEAQEIL-LD 285

Query: 290 KPDLRNPI 297
           K +LR+P+
Sbjct: 286 KFNLRSPV 293



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                 + MP      L            +DL+  G EI 
Sbjct: 315 DFVFLTHYP-----------VSKRPMYAMPDPENPEL---------TKSFDLIFKGLEIT 354

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R +  E++ +      ++     + F      F+ GMPPHGG A G++RI + +L 
Sbjct: 355 TGGQRINDYEMLKENIKKFKLNP----DDFAFYLDNFKYGMPPHGGFAIGLERITLKILN 410

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+RE +L        + 
Sbjct: 411 LDNIREATLITRDMKRLEP 429


>gi|254577988|ref|XP_002494980.1| ZYRO0B00550p [Zygosaccharomyces rouxii]
 gi|238937870|emb|CAR26047.1| ZYRO0B00550p [Zygosaccharomyces rouxii]
          Length = 554

 Score =  167 bits (423), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 70/289 (24%), Positives = 117/289 (40%), Gaps = 26/289 (8%)

Query: 10  GDLGVS-DVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPD----SACFEI 61
            +L  S D G  V     VH  R  G  + FL +R    + Q  V ANPD        + 
Sbjct: 94  DELDESKDDGRHVLFRARVHNTRQQGATLAFLTLRQQSELIQALVKANPDGSVSKNMVKW 153

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A S+  E ++ + G+V   +    +A +    +E+    + I+S        +  +    
Sbjct: 154 AGSLNLESIVLVRGVVHKVAEPIKSATVS--HLEVHVTDLHIISETPSELPILLEDASRS 211

Query: 122 E-------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
           E               R   R +DLR  T       +  +    R  +    F E  TP 
Sbjct: 212 EAEAEAAGLPVVNLDTRLDNRVIDLRTLTNQAIFRIQAGVCALFREFLSNRKFTEIHTPK 271

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L  ++ EG             ++ A  Q+PQ +KQ L+ + F+R F+I P FR E+  + 
Sbjct: 272 LLGAASEGGASVFEVGYFKSKAYLA--QSPQFHKQQLIIADFERVFEIGPVFRAENSNTH 329

Query: 229 RLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           R   EF  LD+EM+F E   ++++ + ++   +F E +   T     +R
Sbjct: 330 RHMTEFTGLDLEMAFEEHYHEVVDLLSDLFVFIFTELTKRYTKEIELVR 378



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/157 (26%), Positives = 57/157 (36%), Gaps = 20/157 (12%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           D      + LG I    ++     DF   +      K      PF             D 
Sbjct: 418 DLSTENERHLGKIVREKYD----TDFYILD------KFPLEVRPFYAMPD------PEDP 461

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               +  YD    G EI SG  R H  +++L+     G+S E V         AF+ G  
Sbjct: 462 R--YSNSYDFFVRGEEILSGAQRIHDYDLLLERMKAHGLSSEEV--GLKDYCDAFKSGCA 517

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PH G   G++R+VM  L  KN+R  SLFP        
Sbjct: 518 PHAGGGIGLERVVMFFLDLKNIRRASLFPRDPKRTRP 554


>gi|256827724|ref|YP_003151683.1| lysyl-tRNA synthetase (class II) [Cryptobacterium curtum DSM 15641]
 gi|256583867|gb|ACU95001.1| lysyl-tRNA synthetase (class II) [Cryptobacterium curtum DSM 15641]
          Length = 771

 Score =  167 bits (423), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 56/292 (19%), Positives = 112/292 (38%), Gaps = 25/292 (8%)

Query: 6   THSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           TH   +L                V ++G +  +R  G I+F+ +R+  G  Q+    +  
Sbjct: 44  THHVDELEAKYANLAAGERTEDVVAMAGRIMAIRNQGKIMFMVLREREGDIQLFCRVNEL 103

Query: 58  CFEIAKSVRSEWV---LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
             E    + +  +   + + G ++             G++ ++    E++S +   PLP 
Sbjct: 104 GDEAFSRMTNFDLGDWIAVTGTILRTKR---------GELSVAVTSFELMSKSIR-PLPE 153

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS- 172
                  +  R++ R++DL  +   K +   R++II++ R  M  E + E  TPIL    
Sbjct: 154 KFHGLTDKETRYRQRYVDLVVNPQVKQVFINRSKIISACRTYMAQEGYYEAETPILQEIM 213

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+          Y L  A + + + L+  G DR ++I   FR+E       P 
Sbjct: 214 GGANAKPFITHFNALNQECY-LRIATELHLKRLLVGGMDRVYEIGRIFRNEGMDLTHNP- 271

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           EF  ++   +F +   +    E  ++       +   ++     I      R
Sbjct: 272 EFTTMEAYCAFSDLAGMKQLCEGFVKAGLHAVCDSEIITYQGTSIDLSGEWR 323



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 59/155 (38%), Gaps = 14/155 (9%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG----GMESLKGNDLL 475
           I    G+     ++  W      +E  +E  +    +  F          +   K  D  
Sbjct: 351 IFDRFGL----EWKQDWGSGKLMFELYDELCERTLVNPTFVCDYPVEVSPLAKRKPKDPR 406

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQC 531
                +++LV  G E A+     +        F+    +K               RA + 
Sbjct: 407 --LTDRFELVIAGHEYANAFTELNDPVDQESRFAAQMEAKRHGDEEAMEYDTDYVRALEY 464

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           GMPP GGI  GIDR+VMLL  + ++R+V LFP  +
Sbjct: 465 GMPPAGGIGIGIDRLVMLLTDSVSIRDVLLFPHMR 499


>gi|193217041|ref|YP_002000283.1| lysyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|226737094|sp|B3PNH7|SYK_MYCA5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|193002364|gb|ACF07579.1| lysyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 490

 Score =  167 bits (423), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 110/274 (40%), Gaps = 29/274 (10%)

Query: 6   THSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           TH+  ++  +                 L+G V   R      FL ++      Q+  +  
Sbjct: 34  THTSEEIHANFANKEREDIEKTNTIAVLNGRVIAQRGP----FLVLQGRSSTLQIYVDKK 89

Query: 56  SACFE---IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +   E   I K +    ++   GLV         +   TG++ + A  I++L+ +  +PL
Sbjct: 90  ALNEETLIILKQLDLGDIISATGLV---------SKTHTGELMIKASDIKLLTKSL-IPL 139

Query: 113 PVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
           P           R+++R++D   +  + K  + R++II  +R      NF+E  TP+L  
Sbjct: 140 PDKFHGLVDREDRYRHRYVDTIVNEDVKKTFILRSKIIKLIREYFDNLNFLEVDTPVLQP 199

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                A    +         + L  A +   + L+  GF+R ++I   FR+E   +   P
Sbjct: 200 ILGGAAAKPFITYYNALNCNFYLRIATELPLKKLIVGGFERVYEIGRIFRNEGIDTTHNP 259

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
            EF  ++   ++ +   ++   E V R + E+ +
Sbjct: 260 -EFTSIEFYEAYSDMWGMMERTEGVFRYIAEKLN 292



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 55/150 (36%), Gaps = 6/150 (4%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A++  I     F+   +++  F ++ EE   +      +  P         ++    
Sbjct: 335 LELAKQHDIKVEKYFKLGHVIEALFEKYIEET--LIQPTFVYGHPLDISPLAFKDESDPR 392

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGM 533
              + +L     E A+     +     LQ F      K               +A + GM
Sbjct: 393 FTQRAELFICTKEFANMYTELNDPFDQLQRFEAQLDEKNAGNEEANEIDWDFVKALEYGM 452

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           PP GG   GI+R++M      ++REV LFP
Sbjct: 453 PPTGGCGIGIERLIMFFTENDSIREVLLFP 482


>gi|317056541|ref|YP_004105008.1| tRNA synthetase class II (D K and N) [Ruminococcus albus 7]
 gi|315448810|gb|ADU22374.1| tRNA synthetase class II (D K and N) [Ruminococcus albus 7]
          Length = 444

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 79/379 (20%), Positives = 149/379 (39%), Gaps = 32/379 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT    D+    +G  +++ G+V   R    + F+ I+D  G  QV    +      +  
Sbjct: 3   RT-YIKDV-KDHLGESIKVQGFVENYRNARAMAFIVIKDITGKLQVTVEKEKHPELNDKL 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-----GE 117
            ++  + V+ + G V        N  +  G +E+  + I   S+A+ +P+         +
Sbjct: 61  DALTGDSVVTVIGQVFE------NDYVKLGGLEMIPEDIIPESIADAIPIARKEIAATKK 114

Query: 118 REYPE----SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
           ++  E      R  YR++DLR D        +T ++N+MR  ++ ENFIE  TP L  ++
Sbjct: 115 KKAVERSSIDQRIDYRWIDLRTDENQLMFKAQTVLVNAMRQFLLGENFIEIHTPKLIGAA 174

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            E           ++ ++ A  Q+PQ YKQ+ MASGF+R F++ P FR E   + +   E
Sbjct: 175 SESGSSVFEVKYFDRNAYLA--QSPQFYKQMAMASGFERIFEVGPVFRAEKSYTSKHTTE 232

Query: 234 FYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           F   D+E S++ +  D++   E +L+                     D+    +G D   
Sbjct: 233 FTGFDLEFSYINDYRDVMAMEEQLLKAGLSAVKEKY----------GDEIKELFGQDVIV 282

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              P  +  + + +   E     K+     G              +   +    +     
Sbjct: 283 PETPFPVVKLADLYKALEEEYGYKVPEEEKGDLTTDAEKLSYEWVKKHYNHEFLFVTDFD 342

Query: 353 QPGLAYIFWRLDESGNVAG 371
               A+   R ++   +  
Sbjct: 343 AEKRAFYHMRDEKGVPMGY 361



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 49/129 (37%), Gaps = 28/129 (21%)

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
            EF ++ DF            D     F   +                  YDL+  G EI
Sbjct: 333 HEFLFVTDF------------DAEKRAFYHMRDE----------KGVPMGYDLIWRGVEI 370

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
            +G  R H  EV+ +  +  G+     +         F+ G PPHGG   G+DR+ MLLL
Sbjct: 371 TTGAQREHRYEVLKKQAAEKGL-----DEDVKFYLEFFKYGCPPHGGFGIGVDRLTMLLL 425

Query: 552 GAKNVREVS 560
           G   ++E  
Sbjct: 426 GLH-IKEAM 433


>gi|297527051|ref|YP_003669075.1| asparaginyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255967|gb|ADI32176.1| asparaginyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 423

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 59/299 (19%), Positives = 123/299 (41%), Gaps = 11/299 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             S VG  V + GW++R    GG  F+ +RD  G+ QVV +      +I ++++   +  
Sbjct: 2   SNSFVGRKVCVRGWIYRRSVVGGKAFVRVRDSTGVIQVVVDKKKCGEDIVRTLKDIGLEA 61

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
                +    E +      G  E+ A   +++  + + P+    +           R L 
Sbjct: 62  ----SVKTCGELVKQPRAPGGYEIQADWFKVVGYSRDFPI----KGGEGIDYLLDNRHLW 113

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R   L + +  +  ++ + R   I   + E + PILTAS+ EG          ++ ++ 
Sbjct: 114 IRSRKLTETMKIKHSVLRAGREYFIENGWWEVTPPILTASAVEGGATLFPVKYFDKTAY- 172

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y + L+ S  ++ + +   FR E  R+ R   E++ L+ E ++   +D++  
Sbjct: 173 -LSQSAQLYLEALIYS-LEKVWSLTTSFRAEKSRTRRHLAEYWHLEAEAAWYNMEDMMRV 230

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            E ++  + +     N      L    +          P +R    +  + +  V+ E+
Sbjct: 231 AEELVAHIVQYVLEHNRRQLEILGRNLEILKNYVEPPYPRIRYDEAIEILQKKGVNIEW 289



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 50/154 (32%), Gaps = 31/154 (20%)

Query: 418 NHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                +LG            +  +I  FP     +E K      +P        E L   
Sbjct: 287 IEWGDDLGADEERVLTMEFDKPFFITHFP-----KEIKSFYMKLDP------ENEKL--- 332

Query: 473 DLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
                 A  +DL+      EI  G  R      +L      G + E  +          +
Sbjct: 333 ------ALGFDLLAPEGYGEIIGGSEREDDYNKLLNRIIEQGYNPEDYK----WYLDLRK 382

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            G  PH G   GI+R+VM + G  ++R+   FP 
Sbjct: 383 YGSVPHSGFGLGIERLVMWIAGLDHIRDAIPFPR 416


>gi|222152793|ref|YP_002561970.1| asparaginyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|222113606|emb|CAR41467.1| asparaginyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 448

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 62/307 (20%), Positives = 109/307 (35%), Gaps = 24/307 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAK 63
             VG  + +  WV      G + FL +RD       V   P+          +  F+  K
Sbjct: 13  KHVGEEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKFGEEVGAEKFDTIK 72

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +  E  + + G+V                 EL    +E++  + E P+     +E+   
Sbjct: 73  RLSQETSVKVSGIVKEDDRSKF-------GYELDITDLEVIGESVEYPITP---KEHGTD 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
                R L LR       +  R  II +         FI+  +PIL+ ++ E + +    
Sbjct: 123 FLMDNRHLWLRSRKQMAIMQIRNAIIYATYEFFDQNGFIKFDSPILSGNAAEDSTELFET 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E SF
Sbjct: 183 DYF--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSF 239

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  D+ L+  E  ++ + +   +    +   L    D   R        +     +  + 
Sbjct: 240 LNHDESLDLQEAYVKALIQGVIDRAPQALEILERDVDALKRYIAEPFKRVSYDDAISLLQ 299

Query: 304 EHFVHSE 310
           EH    +
Sbjct: 300 EHEADED 306



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    E +      +G+ K   E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDDYEALSAKMDALGMDKSEYE----FYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|301113228|ref|XP_002998384.1| lysyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262111685|gb|EEY69737.1| lysyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 544

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 58/301 (19%), Positives = 122/301 (40%), Gaps = 13/301 (4%)

Query: 19  SFVRLSGWVHRVR-PHGGIIFLDIR-DHYGITQVVANPD-----SACFEIAKSVRSEWVL 71
             V L+G V  +R     ++F+D++ D + +  +              E  ++ + E+  
Sbjct: 70  EAVALAGRVVAIRHASKNLVFVDLQSDGHTVQVLSEVKHFEGCSDEAAEDTEAAKKEFKA 129

Query: 72  CIDGLVMSR--SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
             + L        +        G++ +  +K+E+L+   +         + PE IRF+ +
Sbjct: 130 LHESLRRGDIIGVKGFPGKSGKGELSIIPRKLEVLAPCIQPFPNSKYGIKEPE-IRFRKK 188

Query: 130 FLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           +LDL  +  +      R +++  +R  +   NFIE  TP+L +++   A    V +    
Sbjct: 189 YLDLLTNPSVRPIFETRAKVVRGIRKYLEDRNFIEVETPMLFSAAGGAAAQPFVTNSRAL 248

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G    L  AP+ + + L+  GFDR F+I   FR+E   +   P EF   +   ++ + + 
Sbjct: 249 GKDLYLRIAPELFLKQLVIGGFDRVFEIGKVFRNEGIDATHNP-EFTICEFYQAYADYNT 307

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           +++T E ++ G+ +  +    +         + A       + D   P     + E    
Sbjct: 308 LMDTAEEMISGIAKNVTGAYKIQYPMDE-TTEGAEDESAMVEIDFTPPFKRLPILETLEE 366

Query: 309 S 309
            
Sbjct: 367 C 367



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 8/119 (6%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +P  M        +          +++L   G E+ +     +      Q F+     ++
Sbjct: 426 HPKCMSPLAKAHREQE----GVTERFELFVAGKELCNAYTELNDPFDQRQRFAAQQADQQ 481

Query: 517 ----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
                  ++      A + G+PP GG   G+DR+VMLL G  ++REV +FP  +   D+
Sbjct: 482 RGDSEAHSKDDEFCTALEYGLPPTGGFGIGVDRLVMLLSGKPHIREVIMFPAMKPKDDV 540


>gi|304415263|ref|ZP_07395960.1| asparaginyl tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304282889|gb|EFL91355.1| asparaginyl tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 446

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 65/420 (15%), Positives = 138/420 (32%), Gaps = 62/420 (14%)

Query: 23  LSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + GWV   R    G+ F+ + D      +    +++     K +    +    G  +  S
Sbjct: 2   IRGWVRTRRDSKAGLSFIAVDDGSCFASLQVVVNNSLANYEKEI----LRLTPGCSVEIS 57

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            + + +       E+ A ++ +    ++        + +      +   L  R   +   
Sbjct: 58  GQIVASPAKGQAFEMQATEVVVKGCVDDPKTYPMAAKCHSIEYLREVAHLRPRTHLISAV 117

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------------- 187
              R  +  ++      + +   STP++TAS  EGA +    S ++              
Sbjct: 118 ARVRHTLAQAIHRFFHEKGYFWLSTPLITASDTEGAGEMFRVSTLDLENLPRTENGKIDF 177

Query: 188 QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              F+   A      Q      A    + +   P FR E+  + R   EF+ ++ E++F 
Sbjct: 178 DKDFFGKEAFLTVSGQLNAEAYACALSKVYTFGPTFRAENSNTSRHLAEFWMVEPEVAFA 237

Query: 245 EQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRICYDDAI 283
           + DD+    E +L+ +F+   N                      + +S +F ++ Y DAI
Sbjct: 238 DLDDVAGLAEEMLKYLFKAVLNERADDLAFFAERIDKTVITRLQDFISKDFAQVDYTDAI 297

Query: 284 RRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
           +     K    N +   +   +EH  +     F   + V    +            R   
Sbjct: 298 KILQESKQFFENRVTWGIDLSSEHERYLAEEHFKAPVVVKNYPKEI-----KAFYMRLND 352

Query: 342 DRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
           D+    A     PG+  I            +G   +   +   +A    + ++  D  ++
Sbjct: 353 DKKTVAAMDVLAPGIGEI------------IGGAQREERLEVLDARLTAMGLKKEDYVWY 400



 Score = 70.5 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 86/236 (36%), Gaps = 38/236 (16%)

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAK-HLNIVNTEAIRVRLD 392
            G        + +   ++    LA+   R+D++        ++K    +  T+AI++  +
Sbjct: 243 AGLAEEMLKYLFKAVLNERADDLAFFAERIDKTVITRLQDFISKDFAQVDYTDAIKILQE 302

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            +      F           +++   ++A+E      +      + ++P     +E K  
Sbjct: 303 SKQ-----FFENRVTWGIDLSSEHERYLAEE------HFKAPVVVKNYP-----KEIK-- 344

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNV 511
                 F M          +D  ++ A   D++  G  EI  G  R    EV+    + +
Sbjct: 345 -----AFYMR-------LNDDKKTVAAM--DVLAPGIGEIIGGAQREERLEVLDARLTAM 390

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G+ K      +       + G  PH G   G +R++  + G  NVR++  FP +  
Sbjct: 391 GLKK----EDYVWYRDLRRYGTVPHAGFGLGFERLIAYVTGMTNVRDLIPFPRTPR 442


>gi|312889925|ref|ZP_07749469.1| asparaginyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311297457|gb|EFQ74582.1| asparaginyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 479

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 55/291 (18%), Positives = 102/291 (35%), Gaps = 29/291 (9%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA- 62
            RT     L     G  V + GWV   R +    F+ + D      +    D    + A 
Sbjct: 3   KRTKIKALLTGEQTGMEVTVMGWVRAFRQNR---FIALNDGSTNNNIQIVVDFENTDPAL 59

Query: 63  -KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
            K +     + + G++     +         ++E+ A  IE+L   +    P+  +    
Sbjct: 60  LKRITVGAAISVSGILSESLGQG-------QKVEIPASVIEVLGDCDPEKYPLQLKNRPS 112

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                +   L  R +T       R  +  ++        F+   TP++TAS  EGA +  
Sbjct: 113 LEYLREIAHLRFRTNTFGSVFRLRNALSFAVHRFFQERGFVYLHTPVITASDAEGAGETF 172

Query: 182 VPSRVN--------------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             + ++              +  F+          Q +  L A      +   P FR E+
Sbjct: 173 RVTTLDPAKPPLTESGEIDFKQDFFGKATNLTVSGQLEGELGAMALSDIYTFGPTFRAEN 232

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
             + R   EF+ ++ EM+F +  + ++T E +L+ V       N     FL
Sbjct: 233 SNTTRHLAEFWMIEPEMAFCDLAENMDTAEALLKYVISYALEHNREDIEFL 283



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 57/147 (38%), Gaps = 26/147 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +  +   + D+P     +E K        F M Q         D  +++A  
Sbjct: 354 HERYLVEKHFKKPVILTDYP-----KEIK-------AFYMRQND-------DGKTVRAM- 393

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            D++  G  EI  G  R    + + Q    +GI K+ +           + G   H G  
Sbjct: 394 -DILFPGIGEIVGGSQREERLDKLEQRMDEMGIPKDELW----WYLDTRRFGACQHAGFG 448

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G +R+V+ + G  N+R+V  FP +  
Sbjct: 449 LGFERLVLFVTGMGNIRDVIPFPRAPK 475


>gi|332523638|ref|ZP_08399890.1| asparagine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314902|gb|EGJ27887.1| asparagine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 448

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  + +  WV      G + FL +RD       V   P+          +  F++ K +
Sbjct: 15  VGQEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKFGEEEGAKKFDVIKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  + + P+     +E+     
Sbjct: 75  SQETSVRVTGVVKEDQRSKF-------GYELDVTDLEVIGESVDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II S         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAIMQIRNAIIYSTYEFFDQNGFIKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E SF+ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLN 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D  L+  E  ++ + +   +                   ++  F R+ YDDAI      
Sbjct: 242 HDQSLDLQEAYVKALIQGVIDRAPQALEILERDVEALKRYITEPFKRVSYDDAISLLQEH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++    ++ + +    G   R  C 
Sbjct: 302 EADEDTDYEHLDHGDDFGSPHETWISNYFGVPTFVVNYPASFKAFYMKPVPGNPERVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     + + K   E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDDYDALVAKMDALEMDKTEYE----FYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|146298346|ref|YP_001192937.1| asparaginyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|146152764|gb|ABQ03618.1| asparaginyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 481

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 107/277 (38%), Gaps = 30/277 (10%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             V   GWV   R +    F+ + D   I   Q V + ++   E  K + +   + + G 
Sbjct: 17  QEVNAKGWVRTFRNNQ---FIALNDGSTINNIQCVVDFENTPEETLKRITTGAAVSVIGT 73

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++              + E+   K+EIL  ++    P+  ++   E +R +   L +R +
Sbjct: 74  LVESKGAG-------QKYEIQVNKLEILGDSDAEKFPMQPKKHSLEFLR-ENAHLRVRTN 125

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV---------- 186
                +  R+ +  ++      + F+  +TPI+T +  EGA +    + +          
Sbjct: 126 AFGAIMRVRSVLSYAVHSYFQQKGFVYVNTPIITGADAEGAGEMFQVTSLPLDNLPKNEE 185

Query: 187 ----NQGSFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                +  F+          Q +    A    + +   P FR E+  + R   EF+ ++ 
Sbjct: 186 GNIDFKKDFFGKHTNLTVSGQLEGETFAMALGQIYTFGPTFRAENSNTSRHLAEFWMIEP 245

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           E++F + DD ++  E+ ++ V +   +       FL 
Sbjct: 246 EVAFNDLDDNMDLAEDFIQYVIKYALDNCKDDLKFLE 282



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 10/121 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M           +         D++  G  EI  G  R    +V+++   
Sbjct: 369 DYPANIKAFYMRLND-----NTEPGRETVRAMDILFPGIGEIVGGSEREERYDVLVEKME 423

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +GI K              + G   H G   G +R+V+ + G  N+R+V  FP +    
Sbjct: 424 KLGIDK----EELYWYLDTRRFGSATHAGFGLGFERLVLFVTGMTNIRDVIPFPRTPGSA 479

Query: 570 D 570
           +
Sbjct: 480 E 480


>gi|312071859|ref|XP_003138802.1| hypothetical protein LOAG_03217 [Loa loa]
 gi|307766036|gb|EFO25270.1| hypothetical protein LOAG_03217 [Loa loa]
          Length = 602

 Score =  167 bits (422), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 55/242 (22%), Positives = 105/242 (43%), Gaps = 10/242 (4%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
            ++G V   R  G  +IF D+       QV+AN      + A    +       G ++  
Sbjct: 139 SVAGRVFSKRESGGKLIFYDLHGEGTRLQVLANARFHSGDEA--FDNLHDRIKRGDIIGV 196

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LH 139
           +     A   +G++ +   +I  L+      LP        +  R++ R+LDL  +  + 
Sbjct: 197 NG--YPARSKSGELSIIPYEIIQLTPCL-HMLPHTHFGLKNQETRYRMRYLDLIMNPDVK 253

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
              V R+R+I+ +R  +    F+E  TP++   +    A+ F+          Y L  AP
Sbjct: 254 NRFVTRSRMISFLRRYLDNLGFLEVETPMMNLIAGGATAKPFITHHNDLDMDLY-LRVAP 312

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++   E++L 
Sbjct: 313 ELYLKMLVVGGIDRVYEIGRVFRNEGIDQTHNP-EFTSCEFYMAYADYEDLMKITEDMLA 371

Query: 259 GV 260
            +
Sbjct: 372 RM 373



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 4/95 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++L     EI +     +        F      K+  ++           A + 
Sbjct: 493 PGLTERFELFVVTKEIVNAYTELNDPLTQRLRFDEQAKQKQAGDDEAQNIDENYCTALEY 552

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP  G   GIDR+ M+L  + N++EV  FP  +
Sbjct: 553 GLPPTAGWGMGIDRLAMILTDSNNIKEVLFFPAMR 587


>gi|322493438|emb|CBZ28725.1| putative aspartyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 550

 Score =  167 bits (422), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 63/283 (22%), Positives = 116/283 (40%), Gaps = 22/283 (7%)

Query: 4   YRTHS---CGDLG-VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPD 55
           Y++H+     +L     VG  V +   V   R  G + F+ +RD       +  V  +  
Sbjct: 60  YKSHTHIPVAELSQPELVGKTVLIRARVSTTRKKGKMAFMVLRDGSESVQAMAAVEGDVP 119

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPL 112
               +    + +E ++ ++  V     E   ++     IEL  ++I  ++ +       L
Sbjct: 120 KEMIDFMGQIATESIVDVEATVSKV--EQPISSTSHSDIELKVKRIHTVTESLRTLPFTL 177

Query: 113 PVFGEREYPE------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                +E  E        R   R++DLR          ++R+    R  +I  +F E  +
Sbjct: 178 EDASRKESDEGAKVNLDTRLNSRWMDLRTPACGAIFRLQSRVCQYFRQFLIDNDFFEIHS 237

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P +  +  EG  +       N+  F  L Q+PQ YKQ+++     R F++ P FR E+  
Sbjct: 238 PKIINAPSEGGANVFKLEYFNR--FAYLAQSPQLYKQMVLQGDVPRVFEVGPVFRSENSN 295

Query: 227 SDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGN 268
           + R   EF  LD+EM   E   ++L+  E++   +FE  +   
Sbjct: 296 THRHLTEFVGLDVEMRIDEHYYEVLDVAESLFNYIFEHLATHT 338



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   +  PF   +   +    N         YD+   G EI+SG  R H  +++L     
Sbjct: 442 RFPSSVRPFYTMECKDDVRFTN--------SYDMFIRGEEISSGAQRIHDPDLLLARAKM 493

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           + +    ++        +F+ G  PHGG   G++R+VML LG  NVR  SLFP       
Sbjct: 494 LNVDLTPIKE----YVDSFRLGAWPHGGFGVGLERVVMLYLGLSNVRLASLFPRDPQRTT 549

Query: 571 L 571
            
Sbjct: 550 P 550


>gi|22328958|ref|NP_194417.2| aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase,
           putative [Arabidopsis thaliana]
 gi|24030349|gb|AAN41339.1| putative aspartate-tRNA ligase [Arabidopsis thaliana]
 gi|332659863|gb|AEE85263.1| aspartyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 532

 Score =  167 bits (422), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 64/284 (22%), Positives = 108/284 (38%), Gaps = 21/284 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L    VGS V + G +H+ R  G  +F+ +R+     Q V         + K V+     
Sbjct: 79  LVEEIVGSEVSIRGRLHKNRLVGTKLFVILRESGFTVQCVVEETRVGANMIKFVKQLSRE 138

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--------- 122
            +  L+   S         T Q+E+  +K+  LS +      V  +    E         
Sbjct: 139 SVVELIGVVSHPKKPLTGTTQQVEIHVRKMYCLSRSLPNLPLVVEDAARSESDIEKSGKD 198

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R   R LD+R          + ++  + R  + ++ F+E  TP L A S
Sbjct: 199 GKQAARVLQDTRLNNRVLDIRTPANQAIFRIQCQVQIAFREYLQSKGFLEIHTPKLIAGS 258

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG           +G    L Q+PQ +KQ+ +     R F++ P FR ED  + R   E
Sbjct: 259 SEGGSAVFRLDY--KGQPACLAQSPQLHKQMAICGDMRRVFEVGPVFRAEDSFTHRHLCE 316

Query: 234 FYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           F  LD+EM   +   +I++ +  +   +F +           +R
Sbjct: 317 FVGLDVEMEIRMHYSEIMDLVGELFPFIFTKIEERCPKELESVR 360



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 81/215 (37%), Gaps = 26/215 (12%)

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +IF +++E      +  V K     + + +   L +   +    +     +      D  
Sbjct: 343 FIFTKIEERCP-KELESVRKQYPFQSLKFLPQTLRLTFAEGIQMLKEAGEEV-DPLGDLN 400

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLS 476
               ++LG +    ++     +F          +   A  PF TMP     +        
Sbjct: 401 TESERKLGQLVLEKYK----TEFYMLH------RYPSAVRPFYTMPYENDSNY------- 443

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  +D+   G EI SG  R H  E++ +     GI  + +         AF+ G PPH
Sbjct: 444 --SNSFDVFIRGEEIMSGAQRIHDPELLEKRARECGIDVKTIST----YIDAFRYGAPPH 497

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG   G++R+VMLL    N+R+ SLFP        
Sbjct: 498 GGFGVGLERVVMLLCALNNIRKTSLFPRDSQRLTP 532


>gi|313898712|ref|ZP_07832247.1| asparagine--tRNA ligase [Clostridium sp. HGF2]
 gi|312956596|gb|EFR38229.1| asparagine--tRNA ligase [Clostridium sp. HGF2]
          Length = 460

 Score =  167 bits (422), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 57/366 (15%), Positives = 124/366 (33%), Gaps = 44/366 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN--PDSACFEIAKSVRSEWVL 71
             D   +V+L GWV   R  G + F+++ D             +   F   +   +   +
Sbjct: 21  EQDSMEYVQLQGWVRTNRCSGKLGFIELNDGTYFRNAQLVYLQELKNFAEVEKYPTGAAI 80

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G  +                E+   +  +    +    P+  +R   E +R +   L
Sbjct: 81  TVTGKFVLTPQGKQP-------FEIQVTEASLEGDCDRDY-PLQKKRHSFEYLR-EIAHL 131

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
             R ++ +     R+ +  ++      + F+   TPI+T +  EGA +    +  +   +
Sbjct: 132 RPRANSFYAIFRLRSVLSMAIHEFFQDQGFVYVHTPIITGNDGEGAGEMFKATTRDDADY 191

Query: 192 Y-------ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   A      Q      A  F   +   P FR E+  + R   EF+ ++ E++F 
Sbjct: 192 EQDFFGKEAFLTVTGQLHVEAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMIEPEIAFA 251

Query: 245 EQDDILNTMENVLRGVFEEFSNG---------------------NTVSNNFLRICYDDAI 283
           + +D +N +E++++   +                             +++F R+ Y +AI
Sbjct: 252 DLEDDMNLIEDMVKYCIDYVLENAPEEMKFFNTMIDKSCIERITKVRNSDFKRMTYTEAI 311

Query: 284 RRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKIL---SVNPGYEVWAIPAKGGGGNR 338
                      N +   M   +EH  +   ++    +         + + +     G   
Sbjct: 312 DLLLQADVKFDNKVEWGMDLNSEHERYICEKIVDGPVFLTDYPKEIKAFYMRVNDDGKTV 371

Query: 339 AFCDRM 344
           A CD +
Sbjct: 372 AACDLL 377



 Score = 80.5 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 59/396 (14%), Positives = 120/396 (30%), Gaps = 40/396 (10%)

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF-YQLDMEMSFVE-Q 246
           G F   PQ  Q ++  +  +  +       C RD   +  R   E+  ++          
Sbjct: 84  GKFVLTPQGKQPFEIQVTEASLE-----GDCDRDYPLQKKRHSFEYLREIAHLRPRANSF 138

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD------AIRRYGTDKPDLRNPIIMH 300
             I      +   + E F +   V  +   I  +D        +    D  D        
Sbjct: 139 YAIFRLRSVLSMAIHEFFQDQGFVYVHTPIITGNDGEGAGEMFKATTRDDADYEQDFFGK 198

Query: 301 NV-----TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
                   +  V +    F  + +  P +                 +    +A  +    
Sbjct: 199 EAFLTVTGQLHVEAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMIEPEIAFADLEDDMN 258

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVR-LDMQDGDSCFFIAGDPLKFCSFAA 414
           L     +      +       K  N +  ++   R   +++ D       + +     A 
Sbjct: 259 LIEDMVKYCIDYVLENAPEEMKFFNTMIDKSCIERITKVRNSDFKRMTYTEAIDLLLQAD 318

Query: 415 -DARNHIAQELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               N +   + + + +  +    I+D P +  +            F M        + N
Sbjct: 319 VKFDNKVEWGMDLNSEHERYICEKIVDGPVFLTD-----YPKEIKAFYM--------RVN 365

Query: 473 DLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           D     A   DL+  G  E+  G  R    +V+     ++G++ + ++          + 
Sbjct: 366 DDGKTVA-ACDLLVPGVGELVGGSQREERYDVLEARMKDMGMTTDSLQ----WYMDLRRY 420

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G   H G   G DR++M L G +N+R+V  FP +  
Sbjct: 421 GGCKHAGFGLGFDRLLMYLTGMQNIRDVEPFPRTPK 456


>gi|94985238|ref|YP_604602.1| asparaginyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|123079901|sp|Q1IZA1|SYN_DEIGD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|94555519|gb|ABF45433.1| asparaginyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 449

 Score =  167 bits (422), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 94/258 (36%), Gaps = 14/258 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWV 70
            + VG  VR++ W+      G + FL +RD  G  Q      +     FE A+ +  E  
Sbjct: 13  KNHVGETVRVNAWLTDKSGKGKLQFLKLRDGSGFVQATVFKGDVPEEVFEAARRLSQEQA 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G V +            G +EL+ + +  +  A          +E+       +R 
Sbjct: 73  VRVTGEVRADER-------APGGVELAVRDL--VPFAANQAEYPITPKEHGIEFLLDHRH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R  +  ++      E FI    P  T ++ EG  +        +  
Sbjct: 124 LWLRHRRPWAILRVRDCVERAIVEFFHQEGFIRFDAPFFTPNAAEGTTELFEIDLFGEDK 183

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q  Q +     A  F + +   P FR E  ++ R   EF+ ++ E++     D +
Sbjct: 184 AY-LSQTGQLH-AEAGALAFGKVYTFGPTFRAEKSKTRRHLLEFWMVEPEVAPATHQDNM 241

Query: 251 NTMENVLRGVFEEFSNGN 268
           +  E ++  +        
Sbjct: 242 DLQERLVSFLVRRVLEEC 259



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 45/148 (30%), Gaps = 17/148 (11%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
                +LG  +     F +  D P        ++   A   F M     +         I
Sbjct: 313 VEWGDDLGAPHETILGFHF--DRPVIV-----ERYPAAIKAFYMQPDPADPRLALCDDMI 365

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
               Y       EI  G  R H   ++       G+        F       + G  PH 
Sbjct: 366 APEGY------GEIIGGSERIHDYTLLKARIEGEGLPLSA----FDWYLDLRRFGSVPHA 415

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G   G++R++  + G  ++RE   FP  
Sbjct: 416 GFGMGLERVIAWITGIDHIREAIPFPRM 443


>gi|322804910|emb|CBZ02469.1| asparaginyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 463

 Score =  167 bits (422), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 74/431 (17%), Positives = 143/431 (33%), Gaps = 68/431 (15%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVL 71
              +   V+++GWV  VR      F+++ D      V          F+    +     +
Sbjct: 14  EKYMDKEVKINGWVRTVRDSKNFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTSV 73

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            ++G++                 E+ A ++ I   +     P+  +R   E +R     L
Sbjct: 74  EVEGIIQPTPN-------AKQPFEIKATRVSIEGKSSTDY-PLQKKRHTFEYLR-TIAHL 124

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +        R+    ++        F+  +TPI+T S  EGA +    + ++    
Sbjct: 125 RPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDLNNI 184

Query: 190 ------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q      A  F   +   P FR E+  + R   EF
Sbjct: 185 PKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHASEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSNN 273
           + ++ EM+F E  D L+  E++++ V                            N V++N
Sbjct: 245 WMIEPEMAFAELTDYLDNAEDMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDNVVNSN 304

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           F RI Y +A+             +   +   TEH  +   ++F K + V    +      
Sbjct: 305 FKRITYTEAVELLQKSGAKFDYEVEWGIDLQTEHERYLTEQIFKKPVFVTDYPKDI---- 360

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL 391
                 +AF  R+N+  ++     L          G    +G   +   +   E     L
Sbjct: 361 ------KAFYMRLNDDGKTVAAADLLV-------PGVGEIIGGSQREERLDVLEKRMEEL 407

Query: 392 DMQDGDSCFFI 402
           ++   D  +++
Sbjct: 408 NLNKEDYWWYL 418



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 24/138 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P        K I      F M        + ND     A    LV    EI 
Sbjct: 349 KPVFVTDYP--------KDIKA----FYM--------RLNDDGKTVAAADLLVPGVGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+ +    + ++K      +       + G   H G   G +RI+M + G
Sbjct: 389 GGSQREERLDVLEKRMEELNLNK----EDYWWYLELRKYGETKHSGYGLGFERILMYITG 444

Query: 553 AKNVREVSLFPMSQNFCD 570
             N+R+V  FP +    +
Sbjct: 445 MTNIRDVIPFPRTPGSAE 462


>gi|209554140|ref|YP_002284767.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|226695839|sp|B5ZBH7|SYN_UREU1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|209541641|gb|ACI59870.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
          Length = 454

 Score =  167 bits (422), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 98/268 (36%), Gaps = 15/268 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFEIAKSVRSEWV 70
               G  V++  WV   R    I FL + D   +T + A       + +E   + R    
Sbjct: 14  TKLEGQKVQIKAWVRSNRDSKKIGFLVLNDGSSLTNLQAVYRVDKISNYEEITAARMWAA 73

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I+G++                +EL     +IL  ++E  L      +           
Sbjct: 74  VAIEGVIKLTP-------TAKQPLELEVLNAQILKQSDEDFL--LSNNDLSLETLRLNAH 124

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +  H  +  R  +  ++   M    +   + P+ T +  EGA +     + +   
Sbjct: 125 LRPRTNLFHAIMKVRATLAFAVHEFMNQNEYSWLAAPLFTGNDAEGAGETFSIQKFDNEE 184

Query: 191 FYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           F+          Q +    A  F   +   P FR E   ++R   EF+ ++ EM+FV+  
Sbjct: 185 FFGKQTHLSVTGQLQAEAYAQAFGNVYTFGPTFRAEKSHTNRHLAEFWMIEPEMAFVDLK 244

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + + +EN+++ V +     N     FL
Sbjct: 245 GMQDIVENLIKHVIKAVLEKNQQELEFL 272



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  E+  G  R    E +L+    + +                + G     G   
Sbjct: 369 DLLIPGVGELVGGSQREDNYEKLLKRCQELKMPI----ESLQWYLDLRRFGYYMSSGFGI 424

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +R+VM + G  N+++   FP S
Sbjct: 425 GFERLVMYVTGVNNIKDTIPFPRS 448


>gi|171687687|ref|XP_001908784.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943805|emb|CAP69457.1| unnamed protein product [Podospora anserina S mat+]
          Length = 481

 Score =  166 bits (421), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 101/336 (30%), Positives = 156/336 (46%), Gaps = 60/336 (17%)

Query: 18  GSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFE-----------IAKSV 65
           G  V + G++ + R     +IF +++   G +  V +      E             +++
Sbjct: 75  GQTVTVHGFLSQRRISSKKLIFANVQVDNGPSIQVVSHSEPGDESNPPPGHEAHLALRAL 134

Query: 66  RSEWVLCIDGLVMSRSAE---------TINANIITG--QIELSAQKIEILSVAEELPLPV 114
                + + G V+S+  +          I  +   G   +E+S Q I+ L+   +  +  
Sbjct: 135 PLHSPVAVTGTVVSQKGDRDLSASSQRDIPGSFPKGVTHLEISLQNIQPLNAFPKDIIVS 194

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            G +          R L +R D  L   I  R +I + +R  +   NF E  TPIL  S+
Sbjct: 195 KGVQ-----FPPSARHLQIRFDEALQARIRARPKIGHELRKSLTDLNFTEVETPILFKST 249

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
           PEGAR+FLVP+R   G  YALPQ+PQQYKQ+LM+SG   Y+Q A CFRDED R+DR P E
Sbjct: 250 PEGAREFLVPTR-RAGLAYALPQSPQQYKQILMSSGIRGYYQFARCFRDEDLRADRQP-E 307

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFS---------------------------- 265
           F QLD+EMSF    D++ T+E++++ + +  +                            
Sbjct: 308 FTQLDLEMSFATGQDVMRTVESIMKDLMKSLNSQFELVQSDTKERYPVPRRTPPSSDPSS 367

Query: 266 -NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
                    F RI Y++A+ R+G DKPD R P  + 
Sbjct: 368 NPWPVSDKPFPRITYEEAMSRFGVDKPDTRIPFEIT 403


>gi|164656537|ref|XP_001729396.1| hypothetical protein MGL_3431 [Malassezia globosa CBS 7966]
 gi|159103287|gb|EDP42182.1| hypothetical protein MGL_3431 [Malassezia globosa CBS 7966]
          Length = 575

 Score =  166 bits (421), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 65/320 (20%), Positives = 114/320 (35%), Gaps = 31/320 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVA-----NPDSACFEIA 62
             D+     G  + +   +   R     ++FL  R      Q               + A
Sbjct: 111 IEDIHPDKDGQPITMLARLQTSRSPSAKLVFLTFRQTMHCVQATLAVTPEKVSRQMTKWA 170

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEI-------------LSVAEE 109
            S+  E ++ ++G +        + ++   + E+   +I +             +  A  
Sbjct: 171 ASITPESIVRVEGTITKVPKPVESPSVTVKEAEIKISRIFVAVPVTWEGQIPFYVDDATR 230

Query: 110 LPLPVFGEREYPE-------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFI 162
               +   ++ P          R   R LDLR  T          I    R  +    FI
Sbjct: 231 SDAEIEASQDTPRPLPPIALDTRLDNRVLDLRTTTNQAIFRLNHGICRLFREFLENNGFI 290

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
           E  TP L  ++ E              +F A  Q+PQ  KQ+ +A+ F R ++I P FR 
Sbjct: 291 EIHTPKLQGAATESGASVFKVDYFKGNAFLA--QSPQLAKQMAIAADFGRVYEIGPVFRA 348

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLR--ICY 279
           ED  ++R   EF  LD+EM+F E   ++++ +  +   +F E     +     +R     
Sbjct: 349 EDSNTNRHMTEFTGLDLEMAFQEHYHEVVDLLNQLFMYIFSELPKRYSAEIATVRRQYPA 408

Query: 280 DDAIRRYGTDKPDLRNPIIM 299
           DD +      + D R  I M
Sbjct: 409 DDFLVPEAPVRLDFREAIQM 428



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/162 (24%), Positives = 60/162 (37%), Gaps = 22/162 (13%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
            +   D      + LG I  + ++     DF          K      PF       +  
Sbjct: 436 VNDLDDLSTETERALGKIVRDKYK----TDF------YAVDKFPLDIRPFYTMPDAND-- 483

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
                    +  YD    G EI SG  R H ++ + +  +   I    ++        AF
Sbjct: 484 ------KRYSNSYDFFMRGQEILSGAQRVHDAKFLEERLAQAQIPVSAMK----HYVDAF 533

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G PPH G   G++R++ML LG  N+R VSLFP      + 
Sbjct: 534 RLGAPPHAGGGIGLERVLMLYLGLGNIRRVSLFPRDPKRLEP 575


>gi|256545395|ref|ZP_05472758.1| asparagine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398956|gb|EEU12570.1| asparagine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 462

 Score =  166 bits (421), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 59/356 (16%), Positives = 119/356 (33%), Gaps = 51/356 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVL 71
              +   + + GW+ + R    + F+++ D       Q+V   +   FE  +       L
Sbjct: 11  EKYIDQEIIVEGWIRQARFTKNVGFIELNDGTIFKNLQIVVGKELENFEDLQKEHLSASL 70

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            I G+++         N      EL A+ +E+L  ++E       ++            L
Sbjct: 71  KIKGILVK-------TNNAKQAYELQAKSVEVLGHSDEKFPIQKQKQ--SLEYMRTIPHL 121

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +T       R+++  ++        FI  + P++TAS  EGA +    +  N    
Sbjct: 122 RARTNTYRAVFRLRSKLAYALHKFFQERGFIYLNAPLITASDTEGAGEMFQVTTQNLDKL 181

Query: 190 ------------SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+          Q +    A      +   P FR E+  + R   EF
Sbjct: 182 DLNKDGKVDYSKDFFGKKSYLTVSGQLEAEDYALALSNIYTFGPTFRAEESNTPRHAAEF 241

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------------- 275
           + ++ E++F + +  ++  E++++ +             F                    
Sbjct: 242 WMIEPEIAFADYNVCMDVAEDMMKYMISFVLENCKDEIEFFNERVDDTLIERLTKVKDAK 301

Query: 276 --RICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
             RI Y +AI +      D   P+   M   TEH  +   ++    + V    +  
Sbjct: 302 FARITYTEAIEKLQEADVDFEYPVKWGMDLQTEHERYLSEKIVDGPVFVTDYPKDI 357



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 48/136 (35%), Gaps = 26/136 (19%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             ++ D+P        K I      F M +                  +D++     E+ 
Sbjct: 347 PVFVTDYP--------KDIKA----FYMRRNED---------GKTVAAFDMLVPAVGELI 385

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + ++++  + G+  E  +          + G   H G   G +R VM L G
Sbjct: 386 GGSQREERYDELVKSMEDNGLKLEDYQ----NYLDLRKYGTVVHSGYGLGFERAVMYLTG 441

Query: 553 AKNVREVSLFPMSQNF 568
            KN+R+V  +P +   
Sbjct: 442 MKNIRDVIPYPRTVKS 457


>gi|73945457|ref|XP_857814.1| PREDICTED: similar to Asparaginyl-tRNA synthetase, cytoplasmic
           (Asparagine--tRNA ligase) (AsnRS) isoform 2 [Canis
           familiaris]
          Length = 563

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 69/352 (19%), Positives = 125/352 (35%), Gaps = 27/352 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
               G  V++ GWVHR+R  G  ++FL +RD  G  Q V + D         + +E  + 
Sbjct: 132 EEYRGQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLSDDLCQCYNGVVLATESSVT 191

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G +              G  ELS    E++ +A           E    ++   R + 
Sbjct: 192 VYGTLNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMM 247

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECST-PIL---TASSPEGARDFLVPSRVNQ 188
           +R + + K +  R+ +    R       + E S  P       +  EG           +
Sbjct: 248 IRGENMSKILKARSVVTRCFRDHFFDRGYYEVSVYPSSFANVQTQVEGGATLFKLDYFGE 307

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            +F  L Q+ Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  ++
Sbjct: 308 EAF--LTQSSQLYLETCIP-ALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFEE 364

Query: 249 ILNTMENVLRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           +LN +E+++  V +                N       F R+ Y DAI           +
Sbjct: 365 LLNRLEDLVCDVVDRVLKSPAGSIVRDLNPNFKPPKRPFKRMNYSDAIVWLKEHNIKKED 424

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
               +   E    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 425 G-TFYEFGEDIPEAPERLMTDSINEPILLCRFPVEIKSFYMQRCPEDSRLTE 475



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +S     +         L+ N  EI  G +R   SE +L  +  
Sbjct: 454 RFPVEIKSFYMQRCPEDSRLTESVDV-------LMPNVGEIVGGSMRIWDSEEILAGYKR 506

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 507 EGIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCK 562

Query: 571 L 571
            
Sbjct: 563 P 563


>gi|259156631|gb|ACV96574.1| lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Vibrio
           fluvialis Ind1]
          Length = 287

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 110/236 (46%), Gaps = 16/236 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G V   R      FL I++  G  Q  A+      E+ + ++ ++    
Sbjct: 66  LEALNHVVSIAGRVMAKRGP----FLVIQETSGRIQAYASK-----EVQQELKDKYQGLD 116

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++        +    G + ++ ++ ++L+ A   PLP        + +R++ R++DL
Sbjct: 117 IGDIIGVQGALHKSG--KGDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 173

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  + R+++++++R  MI++ F+E  TP++        AR F+          
Sbjct: 174 IVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPM 233

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           Y L  AP+ Y + L+  GFDR F+I   FR+E   S R   EF  ++  M++ +  
Sbjct: 234 Y-LRIAPELYLKRLVVGGFDRVFEINRNFRNEGL-SPRHNPEFTMMEFYMAYADYK 287


>gi|171920411|ref|ZP_02931731.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|171902853|gb|EDT49142.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813]
          Length = 493

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 77/356 (21%), Positives = 139/356 (39%), Gaps = 20/356 (5%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y+  S  +L   D+   + L+G +  +R   GI    I+D     Q+  N  +   E+
Sbjct: 43  EKYKNFSKEELHNMDL-EKLTLAGRLIGIRQTFGI----IQDFSAKLQIYINKKNVAPEV 97

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             + +S  +  I  L      E +     + +I L+   I +++ + +  LP        
Sbjct: 98  FSTFKSLDIGDIIEL------EGVAMKTNSDEITLNVTNIRLVAKSLK-VLPEKYHGLVD 150

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARD 179
           E I+ + R+LDL  +   KN  +KR+ II  MR  +  + F E  TP+L    S   AR 
Sbjct: 151 EEIKARQRYLDLIVNDEAKNTFIKRSLIIREMRNWLDNKGFFEVETPVLQDILSGAAARP 210

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A +   +  +  GF++ ++I   FR+E   S   P EF  +++
Sbjct: 211 FITHHNTL-NKEYYLRIATEIALKKCIIGGFEKVYEIGRIFRNEGMDSTHNP-EFTSVEL 268

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            +++V+   I+   E+++R +  + +  N     F     D           DL N  + 
Sbjct: 269 YIAYVDLWYIMQLTEDLIRHIATKLNLLNPTFRGF---SIDLNKPFKKAHMVDLINEYVG 325

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-DRMNEWARSQGQP 354
            N  E     +    +K   V                   F  +++ E     G P
Sbjct: 326 VNFFEVKSDEQAIELAKKHHVKLLDHQKNFGHIVNAFFETFVEEKLVEPTFVYGHP 381



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 65/157 (41%), Gaps = 11/157 (7%)

Query: 418 NHIAQE--LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG-NDL 474
             +A++  + +++     F  I++  F+E   EEK ++         Q    + K  +D 
Sbjct: 338 IELAKKHHVKLLDHQK-NFGHIVNA-FFETFVEEKLVEPTFVYGHPLQVSPLTKKNQSDP 395

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV----GISKEVVENRFGGLYRAFQ 530
             +   +++L     E A+     +      + F        +  +           A +
Sbjct: 396 RFV--DRFELFICQKEFANAYSEINDPIDQYERFIAQLEEAKLGNDEASELDMEFIEALE 453

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            GMPP GG+  G+DR+VMLL    ++R V LFP  ++
Sbjct: 454 YGMPPTGGLGIGVDRLVMLLTSNDSIRNVLLFPHMKD 490


>gi|66820282|ref|XP_643772.1| asparagine-tRNA ligase [Dictyostelium discoideum AX4]
 gi|74857454|sp|Q554D9|SYNC_DICDI RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|60471958|gb|EAL69912.1| asparagine-tRNA ligase [Dictyostelium discoideum AX4]
          Length = 653

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 66/330 (20%), Positives = 118/330 (35%), Gaps = 19/330 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
               V +  W H VR    I+FL++RD  G  Q V + D     I   +  E  + I G 
Sbjct: 228 ANQRVEVHAWAHHVRNQKKIVFLELRDGTGFLQCVLSGDLVHPSIIDKLLREATVKIVGT 287

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++   A+        G +EL A   E+L  +      V   +E      F  R + +R  
Sbjct: 288 LVIPPADKKCP----GGVELQADYWELLGPSNADLEGVI-NQESNVDHLFDQRHIMMRGT 342

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R+  + + R      +++E + P L  +  EG  +         G    L Q
Sbjct: 343 RASSIMKIRSLCLFAFRQHFFENHYMEVTPPTLVNTYCEGGSELFTVDYF--GKPAYLTQ 400

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y + ++    D  F I   +R E  R+ R   EF  L+ E  F+  +++ + +E +
Sbjct: 401 SSQLYLETMLPVLGDN-FTITQSYRAEKARTRRHLTEFLHLEAECPFITYEELQDRIEFL 459

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +  V E+    +              I     D    + P +  N ++   + +     K
Sbjct: 460 VVDVCEKLFKMDPEL-----------ILSVNPDFKVPKRPFMRMNYSDAIEYCKKNGIQK 508

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
            L      +            R   D++ E
Sbjct: 509 KLEDGTEVDFEFGDDIPEAQERRMNDQIGE 538


>gi|171920875|ref|ZP_02932036.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|185178894|ref|ZP_02964665.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024292|ref|ZP_02996982.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518581|ref|ZP_03004036.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|188524536|ref|ZP_03004527.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|198273637|ref|ZP_03206172.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|225550941|ref|ZP_03771890.1| asparagine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551449|ref|ZP_03772395.1| asparagine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|171903086|gb|EDT49375.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209152|gb|EDU06195.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188018966|gb|EDU57006.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188997791|gb|EDU66888.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195659639|gb|EDX53019.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|198249665|gb|EDY74446.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|225379264|gb|EEH01629.1| asparagine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225380095|gb|EEH02457.1| asparagine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 454

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 98/268 (36%), Gaps = 15/268 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFEIAKSVRSEWV 70
               G  V++  WV   R    I FL + D   +T + A       + +E   + R    
Sbjct: 14  TKLEGQKVQIKAWVRSNRDSKKIGFLVLNDGSSLTNLQAVYRVDKISNYEEITAARMWAA 73

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I+G++                +EL     +IL  ++E  L      +           
Sbjct: 74  VAIEGVIKLTP-------TAKQPLELEVLNAQILKQSDEDFL--LSNNDLSLETLRLNAH 124

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +  H  +  R  +  ++   M    +   + P+ T +  EGA +     + +   
Sbjct: 125 LRPRTNLFHAIMKVRATLAFAVHEFMNQNEYSWLAAPLFTGNDAEGAGETFSIQKFDNEE 184

Query: 191 FYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           F+          Q +    A  F   +   P FR E   ++R   EF+ ++ EM+FV+  
Sbjct: 185 FFGKQTHLSVTGQLQAEAYAQAFGNVYTFGPTFRAEKSHTNRHLAEFWMIEPEMAFVDLK 244

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + + +EN+++ V +     N     FL
Sbjct: 245 GMQDIVENLIKHVIKAVLEKNQQELEFL 272



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  E+  G  R    E +L+    + +                + G     G   
Sbjct: 369 DLLIPGVGELVGGSQREDNYEKLLKRCQELKMPI----ESLQWYLDLRRFGYYMSSGFGI 424

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +R+VM + G  N+++   FP S
Sbjct: 425 GFERLVMYVTGVNNIKDTIPFPRS 448


>gi|18313730|ref|NP_560397.1| asparaginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|18161285|gb|AAL64579.1| asparaginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 431

 Score =  166 bits (421), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 13/246 (5%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V L GWV+R R      F+ +RD  G+ Q+V   +    + A+ +  E  + + G ++ 
Sbjct: 20  RVTLRGWVYRKRVLKEKAFILLRDSTGVIQLVFPRER--LKDAEELNLESSIVVTGALVR 77

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                       G +EL  + ++   + E  P+                R L +R   + 
Sbjct: 78  EPR-------APGGVELHVESVDWAYIGEPYPI-NEDAVVADSEYLLDVRHLWVRSRKMQ 129

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             +  R  I  ++        F E  TP+   ++ EG            G    L Q+ Q
Sbjct: 130 AVLKIRHTIFGAIHEYFRKNGFYEVHTPMFITAAVEGGATLFKVDYF--GQPVYLTQSSQ 187

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y ++L+ S  ++ + IAP FR E  R+ R   EF+  +MEM++   +D     E ++  
Sbjct: 188 FYLEVLIYS-LEKVYVIAPSFRAEPSRTRRHLTEFWHAEMEMAWAGMNDAARVGEELISY 246

Query: 260 VFEEFS 265
           V E   
Sbjct: 247 VVERVL 252



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 41/104 (39%), Gaps = 6/104 (5%)

Query: 470 KGNDLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           + +         +D++      E+  GG R +  + +++     G++ +           
Sbjct: 332 RNDPKRPEVTLSFDVLLPEGYGEVIGGGERIYEEKELVEKIVRFGLNPKDYW----WYID 387

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             + G  PH G   G+DR+ M + GA ++R+V  FP        
Sbjct: 388 LRKYGSVPHAGFGLGVDRLTMWITGADHIRDVVPFPRDVRRTAP 431


>gi|301321281|gb|ADK69924.1| asparagine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC
           str. Gladysdale]
          Length = 454

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 107/267 (40%), Gaps = 18/267 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVLCID 74
           +   V + G V   R    + F+ + D    T +       +  +E A   R   ++ + 
Sbjct: 14  LDKEVEILGRVRSNRQGKFVSFMILNDGTTFTDLQVVYKTKTKGYEQALQARVSSIVKVV 73

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V+    +         + E+ A +IE++  A E       ++E+      +   L  +
Sbjct: 74  GRVVLTPEKQ-------QKFEVQADEIELIDQAIEDYPLQ--KKEHTTEYLREIAHLRAK 124

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVN---QGS 190
             T +     R+    ++      +NF+   +PI+T++  EGA + FLV +R +   +  
Sbjct: 125 TKTFNAIFKIRSAAAYAIHRFFNEKNFVYIHSPIITSNDAEGAGEAFLVTTREDADYEKD 184

Query: 191 FYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           F+    +     Q      A  F + +   P FR E+  + +   EF+ ++ E++F +  
Sbjct: 185 FFGKKASLTVSGQLHAEAFAQAFKKVYTFGPTFRAENSNTAKHAAEFWMIEPEVAFADLK 244

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNF 274
           D +  ++++++ +       N     F
Sbjct: 245 DNIQLIQDMVKYIINYIFKHNRRELEF 271



 Score = 70.5 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 8/101 (7%)

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           +K ND     A   DL+  G  E+  G  R    E +++    V I  + +E        
Sbjct: 356 MKQNDDNKTVA-AVDLLVPGIGELVGGSQREDNYEKLIKRCKEVNIDIDQLEWY-----N 409

Query: 528 AFQ-CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +  G     G   G +R+VM + GA N+R+V  FP +  
Sbjct: 410 NLRLYGYYKSAGFGLGFERLVMYITGASNIRDVIPFPRTPK 450


>gi|324998062|ref|ZP_08119174.1| lysyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 504

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 57/273 (20%), Positives = 111/273 (40%), Gaps = 20/273 (7%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD 55
           RTH+   +  +          G  V ++G V  VR  G + F  +R+  G   Q + + D
Sbjct: 44  RTHTLRQVRDAHPDLPPDTATGEKVAVAGRVIFVRNTGKLCFATLREGDGTELQAMLSLD 103

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                 A+ +     +   G  +    E I +    G++ + A +  I S +  +     
Sbjct: 104 RVG---AEELARWKSVVDLGDFVLVRGEVITSR--RGELSVQADEWSIASKS--VRPLPT 156

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
             +E  E  R + R++DL  R    + +  R+ ++ ++R  +   +F+E  TP+L     
Sbjct: 157 AHKELSEENRVRQRYVDLILRPQARETVRARSTVLRTVREALTDLDFVEVETPMLQLLHG 216

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  +       Y L  AP+ + +  +  G +R F++   FR+E   S   P E
Sbjct: 217 GATARPFVTHANALGSDLY-LRIAPELFLKRCVVGGIERVFELNRVFRNEGIDSTHSP-E 274

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           F  L+   ++   DD+     ++++        
Sbjct: 275 FAMLEAYQAYATYDDMAVLTRDLIQSAARSLFG 307



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 48/142 (33%), Gaps = 26/142 (18%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           ++     E  ++ DFP                P T        L         +  +DL+
Sbjct: 379 LVEHTLIEPTFVRDFP------------VEVRPLTRAHRDDPRL---------SESWDLI 417

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIAA 541
             G E+A+            +      +                 RA + GMPP GG+  
Sbjct: 418 VFGVELATAYSELVDPVEQRERLHAQSVKAAAGDPEAMQLDEDFLRAMEYGMPPTGGMGM 477

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+DR++M L G   +RE  LFP
Sbjct: 478 GVDRLLMTLTGLG-IRETILFP 498


>gi|13357618|ref|NP_077892.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762376|ref|YP_001752141.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|183508493|ref|ZP_02958023.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701849|ref|ZP_02971511.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818]
 gi|11387151|sp|Q9PR83|SYK_UREPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189082973|sp|B1AI47|SYK_UREP2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|11271293|pir||G82937 lysyl-tRNA synthetase UU062 [imported] - Ureaplasma urealyticum
 gi|6899012|gb|AAF30467.1|AE002106_1 lysyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827953|gb|ACA33215.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|182675921|gb|EDT87826.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701144|gb|EDU19426.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818]
          Length = 493

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 77/356 (21%), Positives = 139/356 (39%), Gaps = 20/356 (5%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y+  S  +L   D+   + L+G +  +R   GI    I+D     Q+  N  +   E+
Sbjct: 43  EKYKNFSKEELHNMDL-EKLTLAGRLIGIRQTFGI----IQDFSAKLQIYINKKNVAPEV 97

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             + +S  +  I  L      E +     + +I L+   I +++ + +  LP        
Sbjct: 98  FSTFKSLDIGDIIEL------EGVAMKTNSDEITLNVTNIRLVAKSLK-VLPEKYHGLVD 150

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARD 179
           E I+ + R+LDL  +   KN  +KR+ II  MR  +  + F E  TP+L    S   AR 
Sbjct: 151 EEIKARQRYLDLIVNDETKNTFIKRSLIIREMRNWLDNKGFFEVETPVLQDILSGAAARP 210

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  A +   +  +  GF++ ++I   FR+E   S   P EF  +++
Sbjct: 211 FITHHNTL-NKEYYLRIATEIALKKCIIGGFEKVYEIGRIFRNEGMDSTHNP-EFTSVEL 268

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            +++V+   I+   E+++R +  + +  N     F     D           DL N  + 
Sbjct: 269 YIAYVDLWYIMQLTEDLIRHIATKLNLLNPTFRGF---SIDLNKPFKKAHMVDLINEYVG 325

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC-DRMNEWARSQGQP 354
            N  E     +    +K   V                   F  +++ E     G P
Sbjct: 326 VNFFEVKSDEQAIELAKKHHVKLLDHQKNFGHIVNAFFETFVEEKLVEPTFVYGHP 381



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 65/157 (41%), Gaps = 11/157 (7%)

Query: 418 NHIAQE--LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG-NDL 474
             +A++  + +++     F  I++  F+E   EEK ++         Q    + K  +D 
Sbjct: 338 IELAKKHHVKLLDHQK-NFGHIVNA-FFETFVEEKLVEPTFVYGHPLQVSPLTKKNQSDP 395

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV----GISKEVVENRFGGLYRAFQ 530
             +   +++L     E A+     +      + F        +  +           A +
Sbjct: 396 RFV--DRFELFICQKEFANAYSEINDPIDQYERFIAQLEEAKLGNDEASELDMEFIEALE 453

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            GMPP GG+  G+DR+VMLL    ++R V LFP  ++
Sbjct: 454 YGMPPTGGLGIGVDRLVMLLTSNDSIRNVLLFPHMKD 490


>gi|134114419|ref|XP_774138.1| hypothetical protein CNBG4380 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256771|gb|EAL19491.1| hypothetical protein CNBG4380 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 884

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 70/335 (20%), Positives = 136/335 (40%), Gaps = 14/335 (4%)

Query: 17  VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCI 73
            G+ V + G +H+ R     + F+ +R    + Q + +        +  + +  E ++ +
Sbjct: 111 AGTKVNIRGRIHQQRDLSSHLNFILLRQRGLVIQGILSEHASEHMIKWVQHLPGEAIVQV 170

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +         A      +EL+ +++ ++  + ++P  +      P+S R + R LDL
Sbjct: 171 SGTLREPPKPITAAVDTP--LELNIERLYLVEASHDIPFNLAHGDRPPQSTRLRNRTLDL 228

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R  T       R +++   R  +    F+E +TP L  S+ E   +    +   + +F A
Sbjct: 229 RHPTAQAIFKIRAKVLKVFRDTLDDLGFLEINTPKLQPSATESGAEVFRVNYFGRKAFLA 288

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNT 252
             Q+PQ  KQ+ +++ F R ++I P FR E+  + R   E+  LD+EM+   E  ++   
Sbjct: 289 --QSPQLMKQMAISADFRRVYEIGPVFRAENSNTHRHLTEYTGLDIEMAIQKEYHEVFRI 346

Query: 253 MENVLRGVFEEFSNGNTVSNNFLR-ICYDDAIRRYGTDKPDLRNPIIM-----HNVTEHF 306
           ++ VLR +F       T  N        DD      T     +  + M      +V E  
Sbjct: 347 LDIVLRNIFNALKEMKTELNRIREFFPSDDFQFLEETPIIPFQEAVQMLRDDGRDVEEED 406

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
           +H+   +    L        + +  K     R F 
Sbjct: 407 LHTPDEIRLGELIKEKLGTDYYVIDKFPVSARPFY 441



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 70/195 (35%), Gaps = 29/195 (14%)

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-IINCNCFE 433
           + +     + + +     +   ++   +  D            + I   LG +I      
Sbjct: 368 IREFFPSDDFQFLEETPIIPFQEAVQMLRDDGRDVEEEDLHTPDEI--RLGELIKEKLGT 425

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             +++D           K   +  PF     G                +D+   G E+ +
Sbjct: 426 DYYVID-----------KFPVSARPFYTANDGKI-----------TNSFDMFIRGQEVCT 463

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           GG R +  + + ++    GI+++ +        +AF  GMPPHGG   G++RIV   L  
Sbjct: 464 GGQRINDPKKLRESMKESGINEDEMAE----YLQAFDWGMPPHGGAGLGVERIVTFFLNL 519

Query: 554 KNVREVSLFPMSQNF 568
            +VR  +L+    + 
Sbjct: 520 PDVRLSTLWHRDPHS 534


>gi|262046467|ref|ZP_06019429.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|260573338|gb|EEX29896.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 343

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 73/323 (22%), Positives = 120/323 (37%), Gaps = 34/323 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   V++  W+   R  G IIFL +RD     Q V   +      F+ AKS+R E 
Sbjct: 10  SSKHVDEEVKMHVWLTDKRSSGKIIFLQLRDGTAFFQGVVRKNDVSEEVFDTAKSLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              I G V   +             E+    ++++S  E       G +E+       +R
Sbjct: 70  SFYITGTVHEDARSHF-------GYEIQITDLKVVSNNE---GYPIGNKEHGVDFLLDHR 119

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR       +  R  +  +       E FI+   PI   S+PEG          +  
Sbjct: 120 HLWLRSKKPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEGTTQLFHVEYFDHD 179

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y     A  + + F   P FR E+ +  R   EF+ ++ EM+++ QD+ 
Sbjct: 180 AY--LSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMMEPEMAWMHQDES 236

Query: 250 LNTMENVLRGVFEEFSNGNTV----------------SNNFLRICYDDAIRRYGTDKPDL 293
           L+  E  L  + ++    N                    NF+R+ YDDAI+       D+
Sbjct: 237 LDIQERYLAYMVKQVLENNEYELKILGRDPEKLRPTTEGNFVRLPYDDAIKMLQDAGRDI 296

Query: 294 RNPIIMH--NVTEHFVHSEFRVF 314
           +        +        +  VF
Sbjct: 297 KWGDDFGAPDEGYISEQYDRPVF 319


>gi|70990316|ref|XP_750007.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus fumigatus Af293]
 gi|66847639|gb|EAL87969.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus fumigatus Af293]
 gi|159130487|gb|EDP55600.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus fumigatus A1163]
          Length = 947

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 73/368 (19%), Positives = 140/368 (38%), Gaps = 29/368 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIA-----KS 64
           D+  S VG  V  +  +H +R     ++FL  R      Q V +       IA     + 
Sbjct: 132 DISSSSVGQEVFFTARLHIIRRMSARLVFLVFRQRLTTFQGVLHEKPGAKSIAMVQWAEH 191

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL---------SVAEELPLPVF 115
           +R   ++ + G+V +     +  +I    +EL  ++I ++         SV E       
Sbjct: 192 LRLGSIVRVRGIVQTPQVPVLGCSIH--DVELDVEQIHLVVHREEPVPFSVYEAEIRTAE 249

Query: 116 GER------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
            ++        P+  R   R LDLR  T       ++ + N  R  +  + FIE  TP L
Sbjct: 250 EDKVEGRRSHLPDRTRLNNRILDLRTPTSQSIFRLQSALCNIFRSSLDEQGFIEIHTPKL 309

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             S+ E        +   + +F A  Q+PQ  KQ+ +A+ F+R ++I   FR E+  + R
Sbjct: 310 QGSATESGASVFQVNYFGRDAFLA--QSPQLAKQMAIAADFERVYEIGAVFRAENSNTHR 367

Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
              E+  LD+EM+  E   ++L+ ++ V++ + +            ++  +      +  
Sbjct: 368 HLTEYTGLDIEMAIEEHYHEMLDVLDAVIKNMLKGVYGRYRREIEIVKHQFPSEDVVWLE 427

Query: 289 DKPDLRNPIIMHNVTE---HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
           + P +R    +  + E                L       +  +  +  G +    D+  
Sbjct: 428 ETPIIRFSDGIKMLNESGWRDEDGNPLPEDDDLHTRDEIRLGELVKEKYGTDYYILDKFP 487

Query: 346 EWARSQGQ 353
             AR    
Sbjct: 488 VAARPFYA 495



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 66/165 (40%), Gaps = 19/165 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF             D        +D+   G EI SGG R H   ++ ++   
Sbjct: 485 KFPVAARPFYAMPD------PEDPR--FTNSFDIFIRGQEIVSGGQRIHDPRMLEESMRR 536

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI+ + +E+        F+ G PPH G   G++R++MLLL   N+R  SLF        
Sbjct: 537 SGINPDTMED----YLEGFRWGAPPHAGAGVGLERLLMLLLKLGNIRLASLFHRDPKSFP 592

Query: 571 LLMGSPSTVSVEQLRELGLRIVENP-KKILKISVTTILRNVYGLK 614
                P+ +    LR      +E P ++  + S+      +  L+
Sbjct: 593 P--KPPALL----LRHPESSTIEPPWQREGRGSLAKDESELQPLE 631


>gi|325478591|gb|EGC81703.1| asparagine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 462

 Score =  166 bits (421), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 121/353 (34%), Gaps = 51/353 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
           V   V + GW+   R    + F+++ D       Q+V   D   +           L + 
Sbjct: 14  VDKEVTVYGWIRNQRFGKNVGFIELNDGTTFKNLQIVVASDIENYADLDKQFLSTSLEVT 73

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++       N+       E+ A+++++L  + E   P+  +R+  E +R     L  R
Sbjct: 74  GTLVKTG----NSKNP---YEIQAKEVKVLGESSE-KFPIQKQRQTLEYMR-TIPHLRAR 124

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS---- 190
            +T       R+ +  ++        F+  + PI+TAS  EGA +    + ++       
Sbjct: 125 TNTYRAVFRVRSVLAYALHNFFQERGFVYINPPIVTASDAEGAGEMFNITTIDANDPPRK 184

Query: 191 ----------FYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F++         Q +    A  F   +   P FR E+  + R   EF+ L
Sbjct: 185 EDGSVDYSKDFFSKKSYLTVSGQLEAEDYALAFGDVYTFGPTFRAEESNTPRHAAEFWML 244

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + EM+F + +  ++  E++++   +           F                      R
Sbjct: 245 EPEMAFTDYNLAMDVAEDMIKYAIDHLLKNAPDEMEFFNKWIDEGLIERLEKLRDADFAR 304

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           + Y  AI            P+   +   TEH  +   ++    + V    +  
Sbjct: 305 VTYTKAIELLQESGEKFEFPVEWGIDLQTEHERYLSEKIIDGPVFVTDYPKNI 357



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 66/196 (33%), Gaps = 24/196 (12%)

Query: 378 HLNIVNTEAIRVRLD-MQDGDSCFFIAGDPLKFCSFAAD---ARNHIAQELGIINCNCFE 433
             N    E +  RL+ ++D D         ++    + +          +L       + 
Sbjct: 281 FFNKWIDEGLIERLEKLRDADFARVTYTKAIELLQESGEKFEFPVEWGIDL-QTEHERYL 339

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
              I+D P +  +            F M +        ND     A  +D++  G  E+ 
Sbjct: 340 SEKIIDGPVFVTD-----YPKNIKAFYMKR--------NDDGKTVA-AFDMLVPGVGELI 385

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    E + Q+    G+  E  +          + G   H G   G +R VM + G
Sbjct: 386 GGSQREERYEELYQSMEENGLKPEEYQ----NYLDLRRFGTVVHSGFGLGFERAVMYVTG 441

Query: 553 AKNVREVSLFPMSQNF 568
            KN+R+V  +P   + 
Sbjct: 442 MKNIRDVLAYPRYVHA 457


>gi|332715976|ref|YP_004443442.1| aspartyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325062661|gb|ADY66351.1| aspartyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 438

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 74/356 (20%), Positives = 134/356 (37%), Gaps = 27/356 (7%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA-KSVRS 67
             +L +S +G  V+L G+V  +R    + F+ +RD  G  Q+  N D+     A  ++  
Sbjct: 12  ISELPLS-IGQSVKLHGFVDTIRDQKHMRFIILRDGTGKVQLTQNKDNKALASALDTLTP 70

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           E  L   G V++  A      +  G +E+     E+  +A+ L       R+        
Sbjct: 71  ESALMATGTVVAAPA------VKLGGLEVILDGAEVCGLADSLIPIA---RDSGLEKWLD 121

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +R + LR          +T +  +MR       F E  +P L  ++ E   +       +
Sbjct: 122 HRQVSLRYPEQQLVFAVQTTLEEAMREFWKQYGFREIHSPKLMGTASESGAEVFSVKYFD 181

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQ 246
             +F A  Q+PQ YKQL +A G ++ F+I P FR E   + R   EF  +DME+S++ + 
Sbjct: 182 TTAFLA--QSPQFYKQLAIAGGMEKVFEIGPVFRAEPSFTSRHETEFTSIDMEISWIKDH 239

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
            ++++  +  L       +  +            +A        P L  P +        
Sbjct: 240 HELMDFEQRWLAHSIRVVAEIHGPE--------IEAHFGVKVIPPTLPFPQVTFAEAREI 291

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWR 362
           +     V ++   ++   E       G      F      +       G A+   R
Sbjct: 292 LSQLGHVLTRQDDLDAEGERILCEHIGAQTGHEFL-----FITDYPASGRAFYHMR 342



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 24/138 (17%)

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
             EF +I D+P                 + M   G   +            +DL+  G E
Sbjct: 322 GHEFLFITDYP-----------ASGRAFYHMRHEGCPDI---------TKGFDLLWRGLE 361

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I +G  R H  + ++      G+  + + + F      F+ G PPHGG+  G+ RI+M L
Sbjct: 362 ITTGAQREHRHDRLVAQAEQRGLKLDGLSDYFDF----FRFGCPPHGGMGVGLGRIMMRL 417

Query: 551 LGAKNVREVSLFPMSQNF 568
           L A ++REV+L   +   
Sbjct: 418 LNAASIREVTLLSRTPKR 435


>gi|169844083|ref|XP_001828763.1| aspartate-tRNA ligase [Coprinopsis cinerea okayama7#130]
 gi|116510134|gb|EAU93029.1| aspartate-tRNA ligase [Coprinopsis cinerea okayama7#130]
          Length = 543

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 68/351 (19%), Positives = 125/351 (35%), Gaps = 28/351 (7%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA-----NPDSACFEIAKSVRSEWV 70
           VG  V     VH  R  G  ++FL++R      Q +             + A +V +E +
Sbjct: 91  VGQNVLFRARVHNSRAQGSKMVFLNLRQRTTSVQGLMIVSPGKVSKQMVKWAAAVPTESI 150

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE-------- 122
           + ++G V        +A++    +E+   K+ ++S  +        +   PE        
Sbjct: 151 VLVEGTVEKVDEPIKSASVS--DVEVHISKMHLISGIDGRLPFTVEDANRPETAAEAADA 208

Query: 123 -------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                    R   R +DLR  T       +  I +  R  +    FIE  +P L  ++ E
Sbjct: 209 QFNRVLLETRLNNRVVDLRTQTNQAIFKLQGAIGDLFRDYLRQHGFIEIHSPKLQGAATE 268

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                         +F A  Q+PQ  KQ+ +A+ F+R ++I P FR ED  + R   EF 
Sbjct: 269 SGASVFKVGYFKGNAFLA--QSPQLAKQMAIAADFERVYEIGPVFRAEDSNTHRHLTEFI 326

Query: 236 QLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            LD+EM+  E   +++  ++ +L  +F    +      + +R     A      + P+  
Sbjct: 327 GLDLEMAIEEHYHEVMEMLDGMLVNIFRGLRDQYKDELDVVR-KQFPAEEFKWREGPEGT 385

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG-NRAFCDRM 344
             +      +  V                 +      K     +    D+ 
Sbjct: 386 LKMTFKEAVDLLVEDGVPREDLDDINTENEKRLGRIIKAKYDIDYYIIDKF 436


>gi|116515196|ref|YP_802825.1| hypothetical protein BCc_270 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285408|sp|Q057G7|SYK_BUCCC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116257050|gb|ABJ90732.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)]
          Length = 502

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 68/339 (20%), Positives = 138/339 (40%), Gaps = 30/339 (8%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y  ++  +L    +    ++SG +   R  G  +F  IR++    Q+    +       +
Sbjct: 52  YNNYTKKEL--EKINYKTKISGRIVNKRTFGKALFFVIRNNNHDIQIYIKSNYFPKNYYQ 109

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
                 +    G ++    +    N  T ++ +  +KI +L+ +    LP        + 
Sbjct: 110 K---NILELDLGDIIGVKGKIFKTN--TCELSILCKKIYLLTKSLR-SLPDKYFGLKNQE 163

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
           I+++ R+LDL   + + K   KR+ II+++R  M  + F+E  TP+L        A+ F+
Sbjct: 164 IKYRKRYLDLISNNKIIKIFQKRSLIISNIRSFMKQKKFLEVETPMLHPIPGGANAKPFI 223

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF  +++ M
Sbjct: 224 TYHNSLNEKMY-LRIAPELYLKKLIIGGFNKIFEINRNFRNEGISTKHNP-EFTMMEIYM 281

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI---- 297
           S+    DI+N +E +   + ++ S                 I  Y + K + + PI    
Sbjct: 282 SYSNYIDIMNLLEELCIFLVKKISKSL--------------IIMYKSKKINFKKPIKKMT 327

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
           ++ ++ +   + +   F  I ++        I       
Sbjct: 328 MIESILKFNKNIDISNFKNIKNIKKTATNLNIKIDSNAS 366



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 8/130 (6%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E   E+K I      F        S    +     A +++    G+EIA+G    +  E
Sbjct: 375 FEKTTEKKIIQPT---FITEYPIEISPLAKEKNKYFAERFEFFIAGYEIANGFSELNDPE 431

Query: 503 VMLQAFSNVGISKEVVENRFGG-----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
              + F      K   +             A + G+PP  G+  GIDR++M+L   K ++
Sbjct: 432 EQKKRFKLQISKKNYTDKSKNFSYDKDYIIALEHGLPPTSGLGVGIDRLIMILTNQKTIK 491

Query: 558 EVSLFPMSQN 567
           ++  FP+ + 
Sbjct: 492 DIIFFPLLKK 501


>gi|306817260|ref|ZP_07451006.1| lysine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|304649940|gb|EFM47219.1| lysine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
          Length = 518

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 52/275 (18%), Positives = 108/275 (39%), Gaps = 19/275 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFE 60
            +Y     G+     VG    ++G V  +R  G + F  +++  G   Q++ +      +
Sbjct: 61  EKYPNLEAGEETDDLVG----VAGRVRLMRSSGKLAFATLQEGNGNTIQIMISQGEIGSD 116

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE- 119
              + +++  L   G  +      I++    G++ +   K ++   +       +   + 
Sbjct: 117 SLAAYKTDVDL---GDHLYVHGRVISSK--RGELSIFVDKWQLTCKSLRPLPKTYTNDKG 171

Query: 120 ----YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 E  R + R+LD+      +++V+ R R++ S+R  +    +IE  TP+L     
Sbjct: 172 EEVTLSEDTRIRQRYLDMITRPAARDMVRNRARVVQSLRRYLDECGYIEVETPMLQVIHG 231

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F           Y L  AP+ + +  +  G DR F+I   FR+E   S   P E
Sbjct: 232 GAAARPFETHMNAYDMQLY-LRIAPELFLKRCLIGGIDRVFEINRNFRNEGADSSHSP-E 289

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           F  ++   ++ +   I +    +++    E     
Sbjct: 290 FTMMEAYCAYGDYHQIADLTREMIQRSAREVYGTE 324



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 26/142 (18%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           ++    +E  ++ DFP     E+   +   H                     +  ++DL+
Sbjct: 394 LVGDQIWEPTFVADFP-----EDTSPLVKGH----------------PEKPGQVQKWDLI 432

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIAA 541
             GFE+A+G    +   +    F    +                  A + GMPP GG+  
Sbjct: 433 IRGFEVATGYSELNDPVIQRARFEAQSLDAAKGDPEAMQLDEDFLVAMEHGMPPAGGMGM 492

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+DR++M L G   +RE   FP
Sbjct: 493 GLDRLLMTLTGLG-IRETITFP 513


>gi|256375052|ref|YP_003098712.1| lysyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255919355|gb|ACU34866.1| lysyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 1094

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 104/248 (41%), Gaps = 12/248 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            S  G  V ++G V  +R  GG+ F  +RD  G  QV+ +  +      + +        
Sbjct: 650 ESRFGQVVAITGRVVALRELGGLCFARVRDWTGEVQVMLDAATT-----EDLHLWKSGVD 704

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +    E + +    G++ +      I +     PLP           R + R+LDL
Sbjct: 705 LGDHVGARGEVVRSR--RGELSVLVADWAITAKCL-HPLPDRRAGLADPEARVRKRYLDL 761

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +     +++ R+ ++ ++R  +    ++E  TP+L T      AR F+          
Sbjct: 762 AVNPDSAAMLRTRSAVVRAVRDFLHDRGYLEVETPMLQTVHGGANARPFVTHINAYDTRM 821

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y + L  +G DR F++   FR+E   +   P EF  L+   ++ +   +L+
Sbjct: 822 Y-LRIAPELYLKRLCVAGVDRVFELNRNFRNEGADATHNP-EFTMLEAYQAYADYRVMLD 879

Query: 252 TMENVLRG 259
            +  +++ 
Sbjct: 880 LVRELVQH 887



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 50/147 (34%), Gaps = 26/147 (17%)

Query: 426  IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
            ++        +  DFP             + +P T        L         A ++DLV
Sbjct: 967  LVEPATTAPTFYTDFP------------TSVSPLTREHRADPRL---------AERWDLV 1005

Query: 486  CNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIAA 541
              G E+ +            +      +                  A + GM P GG+  
Sbjct: 1006 AFGAEVGTAYSELTDPVEQRRRLEAQSLKAASGDVEAMELDEDFLAALEHGMAPTGGLGL 1065

Query: 542  GIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G+DR++M+L GA ++R+  LFP  +  
Sbjct: 1066 GVDRLLMMLTGA-SIRQTVLFPFVRPG 1091


>gi|170755098|ref|YP_001780236.1| asparaginyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169120310|gb|ACA44146.1| asparaginyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 463

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/370 (17%), Positives = 122/370 (32%), Gaps = 51/370 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWV 70
               +   V+++GWV  VR      F+++ D      V          F+    +     
Sbjct: 13  TEKYMDKEVKINGWVRTVRDSKNFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G++                 E+ A ++ I   +     P+  +R   E +R     
Sbjct: 73  VEVEGIIQPTPN-------AKQPFEIKATRVSIEGKSSTDY-PLQKKRHTFEYLR-TIAH 123

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++        F+  +TPI+T S  EGA +    + ++   
Sbjct: 124 LRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDLKN 183

Query: 190 -------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+   A      Q      A  F   +   P FR E+  + R   E
Sbjct: 184 IPKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHASE 243

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSN 272
           F+ ++ EM+F E  D L+  E++++ V                            N V++
Sbjct: 244 FWMIEPEMAFAELTDYLDNAEDMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDNVVNS 303

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           +F RI Y +A+             +   +   TEH  +   ++F K + V    +     
Sbjct: 304 DFKRITYTEAVELLQKSGAKFDYEVEWGIDLQTEHERYLTEQIFKKPVFVTDYPKDIKAF 363

Query: 331 AKGGGGNRAF 340
                 +R  
Sbjct: 364 YMRLNDDRKT 373



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 24/138 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P        K I      F M        + ND     A    LV    EI 
Sbjct: 349 KPVFVTDYP--------KDIKA----FYM--------RLNDDRKTVAAADLLVPGVGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+ +    + ++K      +       + G   H G   G +RI+M + G
Sbjct: 389 GGSQREERLDVLEKRMEELNLNK----EDYWWYLELRKYGETKHSGYGLGFERILMYITG 444

Query: 553 AKNVREVSLFPMSQNFCD 570
             N+R+V  FP +    +
Sbjct: 445 MTNIRDVIPFPRTPGSAE 462


>gi|313889924|ref|ZP_07823564.1| asparagine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121690|gb|EFR44789.1| asparagine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 448

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 132/362 (36%), Gaps = 47/362 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  + +  WV      G + FL +RD       V   P+          +  F+I K +
Sbjct: 15  VGQEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEQFGEEEGAKKFDIVKRL 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    +E++  + + P+     +E+     
Sbjct: 75  SQETSVKVTGVVKEDQRSKF-------GYELDITDLEVIGESVDYPITP---KEHGTDFL 124

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II S         FI+  +PIL+ ++ E + +      
Sbjct: 125 MDNRHLWLRSRKQMAIMQIRNAIIYSTYEFFDQNGFIKFDSPILSGNAAEDSTELFETDY 184

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G+   L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E SF+ 
Sbjct: 185 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLN 241

Query: 246 QDDILNTMENVLRGVFEEFSNG----------------NTVSNNFLRICYDDAIRRYGTD 289
            D  L+  E  ++ + +   +                   ++  F R+ YDDAI      
Sbjct: 242 HDQSLDLQEAYVKALIQGVIDRAPQALEILERDVEALKRYIAEPFKRVSYDDAITLLQEH 301

Query: 290 KPD-------LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           + D       L +     +  E ++ + F V + +++    ++ + +    G   R  C 
Sbjct: 302 EADEDTDYEHLEHGDDFGSPHETWISNYFGVPTFVVNYPASFKAFYMKPVPGNPERVLCA 361

Query: 343 RM 344
            +
Sbjct: 362 DL 363



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     + + K   E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDDYQALVAKMDALEMDKSEYE----FYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|330790777|ref|XP_003283472.1| hypothetical protein DICPUDRAFT_44848 [Dictyostelium purpureum]
 gi|325086582|gb|EGC39969.1| hypothetical protein DICPUDRAFT_44848 [Dictyostelium purpureum]
          Length = 649

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 66/287 (22%), Positives = 109/287 (37%), Gaps = 20/287 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           D      G  V ++ W+H VR    I+FL++RD  G  Q V   +     I + ++ E  
Sbjct: 218 DASPKLDGVRVEVNAWLHHVRNQKKIVFLELRDGTGFLQCVMGGNLVHPSIVEQLKREAT 277

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I G +    A         G +EL+A   E+L  +    L      E     +   R 
Sbjct: 278 VKIIGTLSIPPAG----KTCPGGVELNADYWELLG-SSSADLEGIINTESNVDQQLDQRH 332

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           + LR       +  R+  + + R       + E + P L  +  EG  +         G+
Sbjct: 333 ILLRGTRASSIMKIRSIALQAFREHFYHNGYFEMNPPTLVNTFCEGGSELFTLDYF--GT 390

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L Q+ Q Y +  M       F IA  +R E  R+ R   EF  L+ EM F+  +D+ 
Sbjct: 391 PAYLTQSSQLYLE-TMCPVVGDVFCIAQSYRSEKARTRRHLSEFTHLEAEMPFITFEDLT 449

Query: 251 NTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAIRR 285
           + +E ++  V E     +                 F+R+ Y +AI  
Sbjct: 450 DRIEFLICDVVERMLKIDGDLVRSIKEDVAVPKRPFMRMDYKEAIEY 496


>gi|169629405|ref|YP_001703054.1| lysyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|296439663|sp|B1MAX9|LYSX_MYCA9 RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|169241372|emb|CAM62400.1| Probable lysyl-tRNA synthetase 2 LysX [Mycobacterium abscessus]
          Length = 1110

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 14/259 (5%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+  +   +  GS V +SG + R+R +GG++F  +RD     Q++ +      E   +V
Sbjct: 660 SHTVAEALAAPDGSEVVISGRLLRIRDYGGVLFAQLRDWSAEVQLLIDDPRLHEEFTAAV 719

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
               ++   G++   +  T           +  +   I+      PLP   +       R
Sbjct: 720 DLGDLVEASGVMGQSNNGTR---------SVLVESWRIIGKCL-HPLPDKRKGLTDPEAR 769

Query: 126 FKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
            + R+LDL       + I  R+ II S+R  ++A+ F+E  TPIL        AR FL  
Sbjct: 770 VRARYLDLAINPEAREQIAARSAIITSLRNTLLAQGFLEVETPILQQVHGGANARPFLTH 829

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L   G ++ F++   FR+E       P EF  L+   + 
Sbjct: 830 INAYNLDLY-LRIAPELYLKRLCVGGVEKVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 887

Query: 244 VEQDDILNTMENVLRGVFE 262
            +      T + +++   +
Sbjct: 888 ADYVTWAQTTQRLIQNAAK 906



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 71/227 (31%), Gaps = 42/227 (18%)

Query: 346  EWARSQGQPG-LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG 404
            E     G  G LA +     + G    + PV    +   + A+   ++            
Sbjct: 912  EVVMRPGADGRLAPV-----DIGGEWPIVPV----HEAVSRALGEEVNAATEVPTLQRFC 962

Query: 405  DPLKF----CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
               +        A      + + L  +  +     +  DFP             + +P T
Sbjct: 963  QSAEVQFNPRWDAGHLVLELYERL--VEKHTTSPTFYSDFP------------VSVSPLT 1008

Query: 461  MPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKE 516
             P   +  L         A ++DLV  G E+ +            +      +       
Sbjct: 1009 RPHRSIAGL---------AERWDLVAWGVELGTAYTELTDPVEQRRRLYEQSLLAAGGDA 1059

Query: 517  VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                      RA +  M P GG+  G+DR+VML+ G  ++RE   FP
Sbjct: 1060 EAMELDEDFLRAMEYAMAPTGGMGMGVDRVVMLITGR-SIRETLPFP 1105


>gi|153938311|ref|YP_001389961.1| asparaginyl-tRNA synthetase [Clostridium botulinum F str.
           Langeland]
 gi|166231661|sp|A7GB01|SYN_CLOBL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|152934207|gb|ABS39705.1| asparagine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295318046|gb|ADF98423.1| asparagine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 463

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 74/431 (17%), Positives = 143/431 (33%), Gaps = 68/431 (15%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVL 71
              +   V+++GWV  VR      F+++ D      V          F+    +     +
Sbjct: 14  EKYMDKEVKINGWVRTVRDSKNFAFVEVNDGSFFKNVQVILESSLENFKELCKMPISTSV 73

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            ++G++                 E+ A ++ I   +     P+  +R   E +R     L
Sbjct: 74  EVEGIIQPTPN-------AKQPFEIKATRVSIEGKSSTDY-PLQKKRHTFEYLR-TIAHL 124

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +        R+    ++        F+  +TPI+T S  EGA +    + ++    
Sbjct: 125 RPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDLNNI 184

Query: 190 ------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q      A  F   +   P FR E+  + R   EF
Sbjct: 185 PKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALAFRNVYTFGPTFRAENSNTARHASEF 244

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSNN 273
           + ++ EM+F E  D L+  EN+++ V                            N V+++
Sbjct: 245 WMIEPEMAFAELTDYLDNAENMVKFVINYVMENAPEEMAFFNSFVDKGLFDRLDNVVNSD 304

Query: 274 FLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           F RI Y +A+             +   +   TEH  +   ++F K + V    +      
Sbjct: 305 FKRITYTEAVELLQKSGGKFDYEVEWGIDLQTEHERYLTEQIFKKPVFVTDYPKDI---- 360

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL 391
                 +AF  R+N+  ++     L          G    +G   +   +   E     L
Sbjct: 361 ------KAFYMRLNDDGKTVAAADLLV-------PGVGEIIGGSQREERLDVLEKRMEEL 407

Query: 392 DMQDGDSCFFI 402
           ++   D  +++
Sbjct: 408 NLNKEDYWWYL 418



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 24/138 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P        K I      F M        + ND     A    LV    EI 
Sbjct: 349 KPVFVTDYP--------KDIKA----FYM--------RLNDDGKTVAAADLLVPGVGEII 388

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+ +    + ++K      +       + G   H G   G +RI+M + G
Sbjct: 389 GGSQREERLDVLEKRMEELNLNK----EDYWWYLELRKYGETKHSGYGLGFERILMYITG 444

Query: 553 AKNVREVSLFPMSQNFCD 570
             N+R+V  FP +    +
Sbjct: 445 MTNIRDVIPFPRTPGSAE 462


>gi|58269164|ref|XP_571738.1| aspartate--tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57227974|gb|AAW44431.1| aspartate--tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 884

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 70/335 (20%), Positives = 136/335 (40%), Gaps = 14/335 (4%)

Query: 17  VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCI 73
            G+ V + G +H+ R     + F+ +R    + Q + +        +  + +  E ++ +
Sbjct: 111 AGTKVNIRGRIHQQRDLSSHLNFILLRQRGLVIQGILSEHASEHMIKWVQHLPGEAIVQV 170

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +         A      +EL+ +++ ++  + ++P  +      P+S R + R LDL
Sbjct: 171 SGTLREPPKPITAAVDTP--LELNIERLYLVEASHDIPFNLAHGDRPPQSTRLRNRTLDL 228

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R  T       R +++   R  +    F+E +TP L  S+ E   +    +   + +F A
Sbjct: 229 RHPTAQAIFKIRAKVLKVFRDTLDDLGFLEINTPKLQPSATESGAEVFRVNYFGRKAFLA 288

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNT 252
             Q+PQ  KQ+ +++ F R ++I P FR E+  + R   E+  LD+EM+   E  ++   
Sbjct: 289 --QSPQLMKQMAISADFRRVYEIGPVFRAENSNTHRHLTEYTGLDIEMAIQKEYHEVFRI 346

Query: 253 MENVLRGVFEEFSNGNTVSNNFLR-ICYDDAIRRYGTDKPDLRNPIIM-----HNVTEHF 306
           ++ VLR +F       T  N        DD      T     +  + M      +V E  
Sbjct: 347 LDIVLRNIFNALKEMKTELNRIREFFPSDDFQFLEETPIIPFQEAVQMLRDDGRDVEEED 406

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
           +H+   +    L        + +  K     R F 
Sbjct: 407 LHTPDEIRLGELIKEKLGTDYYVIDKFPVSARPFY 441



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 69/195 (35%), Gaps = 29/195 (14%)

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-IINCNCFE 433
           + +     + + +     +   ++   +  D            + I   LG +I      
Sbjct: 368 IREFFPSDDFQFLEETPIIPFQEAVQMLRDDGRDVEEEDLHTPDEI--RLGELIKEKLGT 425

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             +++D           K   +  PF     G                +D+   G E+ +
Sbjct: 426 DYYVID-----------KFPVSARPFYTANDGKI-----------TNSFDMFIRGQEVCT 463

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           GG R +  + + ++     I+++ +        +AF  GMPPHGG   G++RIV   L  
Sbjct: 464 GGQRINDPKELRESMKESRINEDEMAE----YLQAFDWGMPPHGGAGLGVERIVTFFLNL 519

Query: 554 KNVREVSLFPMSQNF 568
            +VR  +L+    + 
Sbjct: 520 PDVRLSTLWHRDPHS 534


>gi|91070510|gb|ABE11417.1| aspartyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
           HOT0M-3E5]
          Length = 143

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 3/140 (2%)

Query: 456 HNPFTMPQG---GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
           H+PF  P+            ++    A  YDLV NG E+  G +R H + +  +    VG
Sbjct: 1   HHPFCSPKNIKSKDPENLQKEIEDSTANAYDLVLNGLELGGGSLRIHEANLQREVLKTVG 60

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
           ++ + +  +FG L  A + G PPHGGIA G+DRI ML++GA ++RE   FP +Q    LL
Sbjct: 61  LTAKEINEKFGFLIEALEMGAPPHGGIAFGLDRITMLIIGADSIRETIAFPKNQQAKCLL 120

Query: 573 MGSPSTVSVEQLRELGLRIV 592
             +PS VS  QL+EL + I 
Sbjct: 121 TNAPSNVSKSQLKELDIEIT 140


>gi|162448262|ref|YP_001621394.1| asparaginyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|189083267|sp|A9NE58|SYN_ACHLI RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|161986369|gb|ABX82018.1| asparaginyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 463

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/345 (17%), Positives = 120/345 (34%), Gaps = 46/345 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            G  V L GW+   R      F+++ D      +    + A  +   +V    V    G 
Sbjct: 16  AGQEVILKGWIRNHRDQKEFGFINLNDGSFFENIQVVYERATTKDFDAVTRLSV----GA 71

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            +      +     +   E+ A ++ ++  + E   P+  +R   E +R +   L  R +
Sbjct: 72  SIEVIGTLVLTPDRSQPFEIKALEVRLIGDSGENY-PIQPKRHTREFLR-EVAHLRPRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------- 189
                   R+    ++      ++F+   TPILTA+  EGA      + ++         
Sbjct: 130 LFSAVFRVRSIAAYAIHKFFQEQDFVYVHTPILTANDGEGAGAMFKVTTLDMNKPPRNED 189

Query: 190 -------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+   A      Q +    A  F   +   P FR E+  +     EF+ ++ 
Sbjct: 190 SSIDYSKDFFGREANLTVTGQLEGEAYAHAFRNIYTFGPTFRAENSNTTTHASEFWMIEP 249

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNG---------------------NTVSNNFLRIC 278
           E++F + +D +  +E +++ V                            N + ++F RI 
Sbjct: 250 EIAFADLNDNMELIERMVKYVTSYVLEHAKEEMAFFDKFVEKGLLTKLDNLLKSSFKRIT 309

Query: 279 YDDAIRRYGTDKPDLRN-PIIMHNVT-EHFVHSEFRVFSKILSVN 321
           +++AI           N P    ++  EH  +   + F   + V 
Sbjct: 310 HEEAINILLKSNHKFENQPKHGEDLAKEHERYLTEKAFHGPVFVK 354



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 73/240 (30%), Gaps = 44/240 (18%)

Query: 335 GGNRAFCDRMNEWARSQ---GQPGLAYIFWRLDESGNVAGMGPVAKH----LNIVNTEAI 387
             N    +RM ++  S            F +  E G +  +  + K     +       I
Sbjct: 257 NDNMELIERMVKYVTSYVLEHAKEEMAFFDKFVEKGLLTKLDNLLKSSFKRITHEEAINI 316

Query: 388 RVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNE 447
            ++ + +      F                     E  +         ++ D+P      
Sbjct: 317 LLKSNHK------FENQPKH-------GEDLAKEHERYLTEKAFHGPVFVKDWP------ 357

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
             K I      F M        + ND     A    LV    E+  G  R    +V+L+ 
Sbjct: 358 --KDIKA----FYM--------RLNDDQKTVAAVDLLVPGSGELVGGSQREERLDVLLKR 403

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             ++ +  + ++          + G     G   G +R ++ + G +N+R+V  FP +  
Sbjct: 404 MEDMHVPVKDLD----WYLDLRRYGGVQTSGFGLGFERYLIYVTGVENIRDVIPFPRTPK 459


>gi|331699832|ref|YP_004336071.1| Lysyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326954521|gb|AEA28218.1| Lysyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 500

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/273 (21%), Positives = 111/273 (40%), Gaps = 20/273 (7%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTH+  ++  +          G  V ++G V   R  G + F  +R+  G          
Sbjct: 41  RTHTLREVRDAHPDLEPDTATGDKVAVAGRVVFQRNTGKLCFATLREGDGT---ELQAML 97

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +  ++ +   ++W   +D G ++    E I +    G++ +SA    +L+ A  +     
Sbjct: 98  SLADVGEESLAQWKAMVDLGDLVLVEGEVITSR--RGELSVSADTWRMLAKA--VRPLPV 153

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSP 174
             RE  E  R + R++DL      + +V+ R+ ++ ++R       +IE  TP+L     
Sbjct: 154 AHRELSEETRVRQRYVDLIMRPRAREMVRARSTVLRTLRRVFEERGYIEVETPMLQVLHG 213

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ Y +  +  G +R F++   FR+E   S   P E
Sbjct: 214 GATARPFVTRSNALSQDLY-LRIAPELYLKRAVVGGIERVFELNRVFRNEGIDSTHSP-E 271

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           F  L+   ++   DD+      ++         
Sbjct: 272 FAMLEAYQAYATYDDMAELTRELILESARAVFG 304



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 28/191 (14%)

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF 440
                 + +    +            LK    A +    + ++L  +     E  ++ D+
Sbjct: 333 EAVGREVTIDTSAETLRKIAAEHDVELKDSWSAGEIVLELFEKL--VEHTLVEPTFVRDY 390

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P                P T        L         A  +DL+  G E+A+       
Sbjct: 391 P------------VEVRPLTRQHRDDPRL---------AEAWDLIVFGTELATAYSELVD 429

Query: 501 SEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                +      +                 RA + GMPP GG+  G+DR++M L G   +
Sbjct: 430 PVEQRERLYRQSLLAAAGDPEAMQLDEDFLRAMEYGMPPTGGMGMGVDRLLMTLTGLG-I 488

Query: 557 REVSLFPMSQN 567
           RE  LFP+ ++
Sbjct: 489 RETILFPLVRS 499


>gi|116627679|ref|YP_820298.1| asparaginyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|122267724|sp|Q03L20|SYN_STRTD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116100956|gb|ABJ66102.1| asparaginyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|312278206|gb|ADQ62863.1| Asparaginyl-tRNA synthetase (AsnS) [Streptococcus thermophilus
           ND03]
          Length = 448

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 72/365 (19%), Positives = 129/365 (35%), Gaps = 47/365 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIA 62
              +G  + +  WV      G I FL +RD       V   P+             F+  
Sbjct: 12  PKHIGEEITIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFIEKFGEEEGLEKFDTI 71

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +  E  + + G+V                 EL    IE++  +          +E+  
Sbjct: 72  KHLSQETSIYVTGMVKEDERSKF-------GYELDITDIEVIGES---QGYPITPKEHGT 121

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                 R L LR          R  II +         FI+  +PIL++++ E + +   
Sbjct: 122 DFLMDNRHLWLRSRKQMAIQQIRNAIIYATYDFFDKNGFIKFDSPILSSNAAEDSTELFE 181

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  +F  L Q+ Q Y +   A    R F   P FR E  ++ R   EF+ +D E S
Sbjct: 182 TDYFGTPAF--LSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYS 238

Query: 243 FVEQDDILNTMENVLRGVFE----------EFSNGN------TVSNNFLRICYDDAIRRY 286
           F+  D+ L+  E  ++ + +          E    +       ++  F R+ YD+AI   
Sbjct: 239 FLSHDESLDLQEAYVKALIQGAIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEAIDLL 298

Query: 287 G-------TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
                   TD   L +     +  E ++ + F V + +++    ++ + +    G   R 
Sbjct: 299 QAHEKDEDTDYEHLEHGDDFGSPHETWISNYFGVPTFVVNYPASFKAFYMKPVPGNPERV 358

Query: 340 FCDRM 344
            C  +
Sbjct: 359 LCADL 363



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 22/142 (15%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 324 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 370

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ +   E          + G  PHGG   GI+R+V  
Sbjct: 371 EIIGGSMREDDYDALVAKMEELGMDRSEYE----FYLDLRKYGSVPHGGFGIGIERMVTF 426

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G K++RE   FP   +    
Sbjct: 427 VAGTKHIREAIPFPRMLHRIKP 448


>gi|159474374|ref|XP_001695300.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii]
 gi|158275783|gb|EDP01558.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii]
          Length = 545

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 66/274 (24%), Positives = 104/274 (37%), Gaps = 27/274 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-----CFEIAKSV 65
            L        V +   +H  R  G   FL +R      Q +   D         + A  +
Sbjct: 90  QLEKELADQTVLVRARIHNTRGKGKSAFLVLRQRTATVQAIMFADETTVSKGMVKYATQI 149

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES-- 123
             E ++ ++G+V          +     +EL    I  +S A  LP  +       E   
Sbjct: 150 PKESIVDVEGIVKVPEKSIDGCSQK--DVELQVTGIRAVSRAAVLPFELVDAARSEEEVK 207

Query: 124 ---------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                          +R   RFLDLR          ++ +    +  ++AE F E  TP 
Sbjct: 208 AAAERGEVMPTVGQDLRLDNRFLDLRTPANQAIFKVQSAVCQLFKTTLLAEGFQEIHTPK 267

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L A + EG            G    L Q+PQ YKQ+ + + F+R F+I P FR E   + 
Sbjct: 268 LIAGASEGGAAVFRLDY--MGVPACLAQSPQLYKQMAICADFNRVFEIGPVFRAEFSYTH 325

Query: 229 RLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVF 261
           R   EF  LD+EM+  E   ++L+ +E +   +F
Sbjct: 326 RHLCEFMGLDLEMAIHEHYFEVLDVIEKLFGAIF 359



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 81/239 (33%), Gaps = 34/239 (14%)

Query: 335 GGNRAFCDRMNEWARSQGQ--PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
             +  + + ++   +  G    GLA  + +            +A            +RL 
Sbjct: 339 AIHEHYFEVLDVIEKLFGAIFNGLATTYAKELAV--------IASQYPFEIPTFKPLRLT 390

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
             +G +     G P        D    + + LG +    +      DF          + 
Sbjct: 391 FPEGIAMLKEGGYPDV--DPMGDLNTELERALGRMVKEKYG----TDFFILH------RY 438

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
             A  PF       +           +  YD+   G EI SG  R H  E++       G
Sbjct: 439 PSAVRPFYTMPCSDDP--------AYSNSYDVFIRGEEIISGAQRVHDPELLTTRAIECG 490

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           I    +++       +F+ G PPHGG   G++R+VML  G  N+R+ S+FP        
Sbjct: 491 IPLPEIQS----YIDSFKYGAPPHGGAGVGLERVVMLYCGLNNIRKTSMFPRDPKRLTP 545


>gi|114581048|ref|XP_001154956.1| PREDICTED: aspartyl-tRNA synthetase isoform 1 [Pan troglodytes]
          Length = 470

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 82/363 (22%), Positives = 143/363 (39%), Gaps = 47/363 (12%)

Query: 27  VHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           +      G   FL +R        +  V  +      + A ++  E ++ I+G+V  R  
Sbjct: 35  IQSQEKPGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANINKESIVDIEGVV--RKV 92

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGE-------------REYPESIRFKYR 129
                +     +EL  QKI ++S+AE        +                 +  R   R
Sbjct: 93  NQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGEEEGRATVNQDTRLDNR 152

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            +DLR  T       ++ I +  R  +I + F+E  TP + +++ EG  +    S     
Sbjct: 153 VIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVSYFKNN 212

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ--- 246
           ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  + R   EF  LD+EM+F      
Sbjct: 213 AYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHE 270

Query: 247 --DDILNTMENVLRGVFEEFS------NGNTVSNNF------LRICYDDAIRRY------ 286
             ++I +TM  + +G+ E F       N       F      LR+ Y +A+         
Sbjct: 271 VMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLREAGVE 330

Query: 287 GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVWAIPAKGGGGNRAFCDR 343
             D+ DL  P    + ++ +    ++F +  K  L+V P Y +          +     R
Sbjct: 331 MGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMPDPRNPKQSNSYDMFMR 390

Query: 344 MNE 346
             E
Sbjct: 391 GEE 393



 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 314 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 363

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 364 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 414

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 415 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 470


>gi|33322965|gb|AAQ07219.1|AF496527_1 aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp. lactis]
          Length = 140

 Score =  166 bits (420), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 73/141 (51%), Positives = 95/141 (67%), Gaps = 1/141 (0%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
           +E+ A +I +L+ A+  P  +  +    E  R KYR+LDLRR TL   ++ R +I+ +  
Sbjct: 1   VEVIASEITVLNKAKTPPFEIKDDLVASEQTRLKYRYLDLRRPTLQNALIMRAQIMTATN 60

Query: 154 CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
             +  E FI   TP L  S+PEGARD+LVPSRV  GSFYALPQ+PQ +KQLLM +GFD+Y
Sbjct: 61  AYLSGEGFINIETPDLGKSTPEGARDYLVPSRVYPGSFYALPQSPQIFKQLLMGAGFDKY 120

Query: 214 FQIAPCFRDEDPRSDRLPGEF 234
           +QIA CFRDED R DR P EF
Sbjct: 121 YQIARCFRDEDLRGDRQP-EF 140


>gi|321258873|ref|XP_003194157.1| asparagine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317460628|gb|ADV22370.1| Asparagine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 600

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 73/356 (20%), Positives = 127/356 (35%), Gaps = 32/356 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
              V   VRL GWVHR RP     F+ +RD  G  Q +   D      A  +  E  + +
Sbjct: 171 PELVDKRVRLQGWVHRFRPQKTNFFVVLRDGSGFLQCILTGDCIRTVDALDLSLECTVEV 230

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREYPESIRFKYRFL 131
            G V              G +EL+    +I+  A      +    + +   SIR   R L
Sbjct: 231 VGTVEKVKEGQ----TAPGGVELAVDYWKIIGKAPTGAEAIESRLQPDTDASIRADLRHL 286

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           +LR +     +  R   + ++R         E + P +  +S EG            GS 
Sbjct: 287 ELRGEIAASVMRFRALFLRALRESFHKRRITEVTPPCMVQTSVEGGSTLFEFDYY--GSK 344

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y + ++ S     + I   FR E   + R   E+  L+ E++FV   D+L+
Sbjct: 345 AYLTQSSQLYLETVLPS-LGDVYCIQESFRAEKSLTRRHLSEYTHLEAELAFVNFKDLLD 403

Query: 252 TMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRR---YGTDKPDLR 294
            +E+++  V +                         F+R+ Y DAI+    +G  + D  
Sbjct: 404 HIEDLICEVIDTLLADPIASEIIKNLNPEFVPPQRPFVRLDYCDAIKYLNEHGIMREDGE 463

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
           + ++  ++ E               +N    +   P           +   ++  S
Sbjct: 464 DHVVGDDIAEAAER------KMTDQINKPIMLINFPKALKSFYMKALEDAPDFTES 513



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    E+  G +R    E ++  +    I      + +       + G   HGG   G+
Sbjct: 517 LVPGVGEVIGGSMRISDLEELMAGYKREDIPA----DPYYWFTDQRKYGTAEHGGYGLGV 572

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  +L    VRE SL+P 
Sbjct: 573 ERCLAWILKRYTVRECSLYPR 593


>gi|313238210|emb|CBY13303.1| unnamed protein product [Oikopleura dioica]
          Length = 603

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/278 (23%), Positives = 113/278 (40%), Gaps = 27/278 (9%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIR--DHYGITQVVANPDS----ACFE 60
           S GDL  S     V +   +H  R  G  ++F+ +R         ++A+ +        +
Sbjct: 144 SVGDLDESMDKKSVWIRARLHNSRAQGSAMVFMTLRESQFTCQALLLADIEKGVSKQMLK 203

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-------- 112
            A S+  E ++ I   V+    +  +       +EL  ++  ++S +  +          
Sbjct: 204 YAASLSKESIIDIHADVVKSPTKIESCTQKN--VELKVKQFFVVSKSLPILPLQIEDASR 261

Query: 113 -------PVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
                  P  G        R   R LDLR  T H     +  +    R  +  + F E  
Sbjct: 262 AEKADGEPDDGLVRVNPDTRLDNRVLDLRTTTKHAIFRIQAAVCRLFRNHLTNKGFTEIH 321

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP + +++ EG  +    S   + +F A  Q+PQ YKQ+ +A+ F++ F     FR ED 
Sbjct: 322 TPKIISAASEGGANVFTLSYFKRDAFLA--QSPQLYKQMAIAADFEKVFTTGAVFRAEDS 379

Query: 226 RSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFE 262
            + R   EF  LDMEM+F     ++L  + +    +F+
Sbjct: 380 NTHRHLTEFVGLDMEMAFKYHYHEVLREIGDTFISIFK 417



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 52/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF             D     +  YD+   G EI SG  R H  +++++   +
Sbjct: 495 KYPLAVRPFYTMPD------PTDPR--YSNSYDMFMRGEEILSGAQRIHDPDLLIERAHH 546

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI+ + +E        AF+ G PPH G   G++R+ ML LG  N+R  SLFP       
Sbjct: 547 HGINLKHIEA----YIEAFKYGCPPHAGGGIGMERVTMLYLGLHNIRMASLFPRDPKRLT 602

Query: 571 L 571
            
Sbjct: 603 P 603


>gi|313665716|ref|YP_004047587.1| asparagine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312950012|gb|ADR24608.1| asparagine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 454

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 107/273 (39%), Gaps = 18/273 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSE 68
           +     +   V + G V   R    + F+ + D    T +       +  +E A   R  
Sbjct: 8   EQHSELLDKEVEIIGRVRSNRQGKFVSFMILNDGTTFTDLQVVYKTKTKGYEQALQARVS 67

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G V+    +         + EL A  IE++  A E       ++E+      + 
Sbjct: 68  SIVKVVGRVVLTPEKQ-------QKFELQADVIELIDQAIEDYPLQ--KKEHTTEYLREI 118

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVN 187
             L  +  T +     R+    ++      + F+   +PI+T++  EGA + FLV +R +
Sbjct: 119 AHLRAKTKTFNAIFKIRSAAAYAIHKFFNNKGFVYIHSPIITSNDAEGAGEAFLVTTRED 178

Query: 188 ---QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
              +  F+A   +     Q      A  F + +   P FR E+  + +   EF+ ++ E+
Sbjct: 179 ADYEKDFFAKKASLTVSGQLHAEAFAQAFKKVYTFGPTFRAENSNTVKHAAEFWMIEPEV 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           +F +  D +  ++++++ +       N     F
Sbjct: 239 AFADLKDNIQLIQDMVKYIINYIFKHNRRELEF 271



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 8/101 (7%)

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           +K ND     A   DL+  G  E+  G  R    E +++    V I  + +E        
Sbjct: 356 MKQNDDNKTVA-AVDLLVPGIGELVGGSQREDNYEKLIKRCKEVNIDIDQLEWY-----N 409

Query: 528 AFQ-CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +  G     G   G +R+VM + GA N+R+V  FP +  
Sbjct: 410 NLRLYGYYKSAGFGLGFERLVMYITGASNIRDVIPFPRTPK 450


>gi|291008865|ref|ZP_06566838.1| lysyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 1099

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 108/262 (41%), Gaps = 18/262 (6%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RT  C  +             G    ++G V R+R HGG+ F  +RD  G  QV+   D 
Sbjct: 633 RTQPCRAVAEHHGGLEPGTRTGETTSVAGRVMRLRDHGGLCFATVRDWSGDLQVLLTADD 692

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           +  ++  + R E  L   G  +S + E + ++   G++ + A+   +       PLP   
Sbjct: 693 SGHDLLVAWRGEVDL---GDQVSVTGEVVTSD--RGELTVLAKSWTLAGKCL-HPLPDKH 746

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS-SP 174
                   R + R LDL      +++++ R+   +++R  ++  +F+E  TP+L      
Sbjct: 747 RGLSDPHSRVRARHLDLITRPEARSVLRARSAATHALRDVLVRSDFVEVETPVLQPVRGG 806

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F           Y L  AP+ Y + L   G +R F+I   FR+E       P EF
Sbjct: 807 ANARPFSTHINAYDLRLY-LRIAPELYLKRLCVGGVERLFEIGRAFRNEGVSHKHNP-EF 864

Query: 235 YQLDMEMSFVEQDDILNTMENV 256
             L+   +F +   +      +
Sbjct: 865 TMLEAYQAFGDYTTMRELCREL 886



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 51/154 (33%), Gaps = 28/154 (18%)

Query: 414  ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                  + + L  +        +  DFP      E   +   H                 
Sbjct: 962  GAVLLELYERL--VEAETTGPTFYRDFP-----AEVSPLARPHR---------------- 998

Query: 474  LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
              +  A ++DLV  G E+ +G           +  ++        +            A 
Sbjct: 999  HDARLAERWDLVAFGTELGTGYSELTDPVEQRRRLADQARLAAEGDAEAMDVDEDFLTAL 1058

Query: 530  QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  MPP GG+  G+DR+VMLL G  ++R+   FP
Sbjct: 1059 EYAMPPTGGLGLGVDRLVMLLTGR-SIRDTLAFP 1091


>gi|134101270|ref|YP_001106931.1| lysyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133913893|emb|CAM04006.1| lysyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 1098

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 108/262 (41%), Gaps = 18/262 (6%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RT  C  +             G    ++G V R+R HGG+ F  +RD  G  QV+   D 
Sbjct: 632 RTQPCRAVAEHHGGLEPGTRTGETTSVAGRVMRLRDHGGLCFATVRDWSGDLQVLLTADD 691

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           +  ++  + R E  L   G  +S + E + ++   G++ + A+   +       PLP   
Sbjct: 692 SGHDLLVAWRGEVDL---GDQVSVTGEVVTSD--RGELTVLAKSWTLAGKCL-HPLPDKH 745

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS-SP 174
                   R + R LDL      +++++ R+   +++R  ++  +F+E  TP+L      
Sbjct: 746 RGLSDPHSRVRARHLDLITRPEARSVLRARSAATHALRDVLVRSDFVEVETPVLQPVRGG 805

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F           Y L  AP+ Y + L   G +R F+I   FR+E       P EF
Sbjct: 806 ANARPFSTHINAYDLRLY-LRIAPELYLKRLCVGGVERLFEIGRAFRNEGVSHKHNP-EF 863

Query: 235 YQLDMEMSFVEQDDILNTMENV 256
             L+   +F +   +      +
Sbjct: 864 TMLEAYQAFGDYTTMRELCREL 885



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 51/154 (33%), Gaps = 28/154 (18%)

Query: 414  ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                  + + L  +        +  DFP      E   +   H                 
Sbjct: 961  GAVLLELYERL--VEAETTGPTFYRDFP-----AEVSPLARPHR---------------- 997

Query: 474  LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
              +  A ++DLV  G E+ +G           +  ++        +            A 
Sbjct: 998  HDARLAERWDLVAFGTELGTGYSELTDPVEQRRRLADQARLAAEGDAEAMDVDEDFLTAL 1057

Query: 530  QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  MPP GG+  G+DR+VMLL G  ++R+   FP
Sbjct: 1058 EYAMPPTGGLGLGVDRLVMLLTGR-SIRDTLAFP 1090


>gi|313245404|emb|CBY40142.1| unnamed protein product [Oikopleura dioica]
          Length = 603

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/278 (23%), Positives = 113/278 (40%), Gaps = 27/278 (9%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIR--DHYGITQVVANPDS----ACFE 60
           S GDL  S     V +   +H  R  G  ++F+ +R         ++A+ +        +
Sbjct: 144 SVGDLDESMDKKSVWIRARLHNSRAQGSAMVFMTLRESQFTCQALLLADIEKGVSKQMLK 203

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL-------- 112
            A S+  E ++ I   V+    +  +       +EL  ++  ++S +  +          
Sbjct: 204 YAASLSKESIIDIHADVVKSPTKIESCTQKN--VELKVKQFFVVSKSLPILPLQIEDASR 261

Query: 113 -------PVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
                  P  G        R   R LDLR  T H     +  +    R  +  + F E  
Sbjct: 262 AEKADGEPDDGLVRVNPDTRLDNRVLDLRTTTKHAIFRIQAAVCRLFRNHLTNKGFTEIH 321

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP + +++ EG  +    S   + +F A  Q+PQ YKQ+ +A+ F++ F     FR ED 
Sbjct: 322 TPKIISAASEGGANVFTLSYFKRDAFLA--QSPQLYKQMAIAADFEKVFTTGAVFRAEDS 379

Query: 226 RSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFE 262
            + R   EF  LDMEM+F     ++L  + +    +F+
Sbjct: 380 NTHRHLTEFVGLDMEMAFKYHYHEVLREIGDTFISIFK 417



 Score =  105 bits (262), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 52/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF             D     +  YD+   G EI SG  R H  +++++   +
Sbjct: 495 KYPLAVRPFYTMPD------PTDPR--YSNSYDMFMRGEEILSGAQRIHDPDLLIERAHH 546

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI+ + +E        AF+ G PPH G   G++R+ ML LG  N+R  SLFP       
Sbjct: 547 HGINLKHIEA----YIEAFKYGCPPHAGGGIGMERVTMLYLGLHNIRMASLFPRDPKRLT 602

Query: 571 L 571
            
Sbjct: 603 P 603


>gi|225569282|ref|ZP_03778307.1| hypothetical protein CLOHYLEM_05364 [Clostridium hylemonae DSM
           15053]
 gi|225162081|gb|EEG74700.1| hypothetical protein CLOHYLEM_05364 [Clostridium hylemonae DSM
           15053]
          Length = 443

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 66/304 (21%), Positives = 123/304 (40%), Gaps = 15/304 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +    T     L  ++ G  V+++G VH +R  G + F+ +R   G+ Q V    +A F+
Sbjct: 7   VKEKDTLEISGLLKTEAGESVKVNGAVHTIRNMGTVAFVILRKREGLLQGVYEEGAADFD 66

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP---VFGE 117
           + K +R    + I+G++              G IE+  + + +L    +  +P      +
Sbjct: 67  L-KDLREADTIEIEGILEKNEK-------APGGIEIRMKHLTVLGRPADDMMPLPISKWK 118

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                  +  YR + LR          +  +  + R  +  + F E  TP + A S EG 
Sbjct: 119 LNTSLEAKLNYRSISLRNLRERAKFRIQEGLTRAFRDYLYGQGFTEIHTPKIGARSAEGG 178

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +       ++ +   L Q+PQ YKQ +M   FDR F+ AP FR E   + R   E+  L
Sbjct: 179 ANLFRLDYFHRPA--VLQQSPQLYKQ-MMVGVFDRVFETAPVFRAEKHNTKRHLNEYTSL 235

Query: 238 DMEMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           D EM +++  ++I+      ++      +         L I   DA +       +++  
Sbjct: 236 DFEMGYIDSFEEIMAMETGYIQYAMALLAGEYAAELKTLDITLPDAAKIPAVRFDEIKEK 295

Query: 297 IIMH 300
           +   
Sbjct: 296 VAEK 299



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF            +   +     +DL+  G EI 
Sbjct: 329 DFVFVTHYP------------SRKRPFYAM--------DDPADTRYTLSFDLLFRGMEIT 368

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H   ++    +  G++++ +E        AF+ GMPPHGGI  G++R  M L G
Sbjct: 369 TGGQRIHDHGMLKDKIAARGMTEDGLEQ----YLEAFRHGMPPHGGIGIGLERFTMKLAG 424

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+RE +LFP   +  + 
Sbjct: 425 EDNIRETTLFPRDLSRLEP 443


>gi|258566145|ref|XP_002583817.1| hypothetical protein UREG_06784 [Uncinocarpus reesii 1704]
 gi|237907518|gb|EEP81919.1| hypothetical protein UREG_06784 [Uncinocarpus reesii 1704]
          Length = 938

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 75/367 (20%), Positives = 139/367 (37%), Gaps = 29/367 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH-----YGITQVVANPDSACFEIAKSV 65
           +     G  +     +H VR  G  ++FL  R         +T+      +   + A+ +
Sbjct: 123 IRSDMDGQEITFRARLHVVRRMGQKLVFLVFRQQVITLQGVLTEAKGEISTLMVQWAEHI 182

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------ 119
           R   +L + G++       I   I    IEL  +++ ++   EE       E E      
Sbjct: 183 RVGSILRVKGILRKPEVPVIGTTIH--DIELHIRELHVIVRREEPVPFSVYEAELPAADE 240

Query: 120 ---------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                     P+  R   R LDLR DT       ++ I +  R  + A  FIE  TP L 
Sbjct: 241 EKIEGRRTRVPDRTRLTNRILDLRTDTSQSIFRIQSAISSYFRSTLDANGFIEIHTPKLQ 300

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            S+ E        +  ++ +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R 
Sbjct: 301 GSATESGASVFNVNYFSRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRH 358

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             E+  LDMEM   E   + L+ ++ V++ +F    + +      ++  +      +   
Sbjct: 359 LTEYTGLDMEMVIEEHYHESLDVLDQVIKAIFTAIYDRHRREVQIIKHQFPSEDLLWLDQ 418

Query: 290 KPDLRNPIIMHNVTEH-FVHSEFRVFSKILSVN--PGYEVWAIPAKGGGGNRAFCDRMNE 346
            P +     +  + E  +   + + FS    +       +  +  +    +    D+   
Sbjct: 419 TPIITFSEGIKMLNESGWRTEDGKEFSDQEDIGTRDEIRLGELIKEKYHTDYYIMDKFPA 478

Query: 347 WARSQGQ 353
            AR    
Sbjct: 479 AARPFYA 485



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 77/212 (36%), Gaps = 30/212 (14%)

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA-DARNHIAQ 422
            E   +    P    L +  T  I     ++  +   +   D  +F        R+ I  
Sbjct: 399 REVQIIKHQFPSEDLLWLDQTPIITFSEGIKMLNESGWRTEDGKEFSDQEDIGTRDEI-- 456

Query: 423 ELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            LG +I        +IMD           K   A  PF       +S   N         
Sbjct: 457 RLGELIKEKYHTDYYIMD-----------KFPAAARPFYAMPDPDDSRFTN--------S 497

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD+   G EI SGG R H   ++ +    +GI    +E         F+ G PPH G   
Sbjct: 498 YDIFVRGQEIVSGGQRIHDPVMLEERMKKMGIDPASMEE----YMEGFRWGAPPHAGAGI 553

Query: 542 GIDRIVMLLLGAKNVREVSLF---PMSQNFCD 570
           G++R++ML+L   N+R  SLF   P S    D
Sbjct: 554 GLERMLMLILKLGNIRLASLFHRDPKSFPAQD 585


>gi|325679651|ref|ZP_08159226.1| nucleic acid-binding domain protein [Ruminococcus albus 8]
 gi|324108681|gb|EGC02922.1| nucleic acid-binding domain protein [Ruminococcus albus 8]
          Length = 444

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 22/266 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT    D+  +++G  +++ G+V   R    + F+ ++D  G  QV    +      E  
Sbjct: 3   RT-YIKDV-KANLGETIKVQGFVENFRNSRAMAFIVVKDITGKLQVTVEKEKHPELNEKL 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---------ELPLP 113
             +  + V+ I G VM       N  +  G +E+  + I   S+A+              
Sbjct: 61  DMLTGDSVVTIIGQVME------NDYVKLGGLEMIPEDIICESIADALPITRKEIPATKK 114

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R  YR++DLR D        +T  +N+MR  ++ +NFIE  TP L  ++
Sbjct: 115 KKAVERSSIDQRIDYRWIDLRTDENQLMFKVQTCFVNAMRNFLLGQNFIEIHTPKLIGAA 174

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            E           ++ ++ A  Q+PQ YKQ+ MASGF+R F++ P FR E   + +   E
Sbjct: 175 SESGSSVFEVEYFDRKAYLA--QSPQFYKQMAMASGFERIFEVGPVFRAEKSYTSKHTTE 232

Query: 234 FYQLDMEMSFVE-QDDILNTMENVLR 258
           F   D+E S++E   D++   E +L+
Sbjct: 233 FTGFDLEFSYIESYKDVMAMEEQLLK 258



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 47/129 (36%), Gaps = 28/129 (21%)

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
            EF +I D             D     F   +            +     YDL+  G EI
Sbjct: 333 HEFLFITD------------YDAEKRAFYHMRDE----------NGVPMGYDLIWRGVEI 370

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
            +G  R H  E++ +     G+     +         F+ G PPHGG   G+DR+ MLL 
Sbjct: 371 TTGAQREHRYEILKKQAQEKGL-----DEDVKFYLEFFKYGCPPHGGFGLGVDRLTMLLT 425

Query: 552 GAKNVREVS 560
           G   ++E  
Sbjct: 426 GLH-IKEAM 433


>gi|46199389|ref|YP_005056.1| aspartyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|46197014|gb|AAS81429.1| aspartyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 422

 Score =  166 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 77/307 (25%), Positives = 137/307 (44%), Gaps = 36/307 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            + VG  V L G++H  R  G I FL +RD  G+ QVV           K    E  L +
Sbjct: 9   KAHVGQEVELLGFLHWRRDLGRIQFLLLRDRSGVVQVVTGG-------LKLPLPESALRV 61

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YPESIRFKYRFL 131
            GLV+  +          G +E+ A+++E+LS A E       + E         +YR++
Sbjct: 62  RGLVVENAK-------APGGLEVQAKEVEVLSPALEPTPVEIPKEEWRANPDTLLEYRYV 114

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR +     +  +  ++   R  +  ++F E  TP +  +  EG           + ++
Sbjct: 115 TLRGEKARAPLKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGAEGGSGLFGVDYFEKRAY 174

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDIL 250
            A  Q+PQ YKQ +M   F+R +++AP +R E+  + R   E+  LD+EM F+ +++D++
Sbjct: 175 LA--QSPQLYKQ-IMVGVFERVYEVAPVWRMEEHHTSRHLNEYLSLDVEMGFIADEEDLM 231

Query: 251 NTMENVLRGVFEEFSN------------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              E +L  + EE  N              +   +  R+ + +A R     K +L  P+ 
Sbjct: 232 RLEEALLAEMLEEALNTAGDEIRLLGATWPSFPQDIPRLTHAEAKRIL---KEELGYPV- 287

Query: 299 MHNVTEH 305
             +++E 
Sbjct: 288 GQDLSEE 294



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 56/157 (35%), Gaps = 24/157 (15%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           D      + LG      +   W      +       +   +  PF               
Sbjct: 290 DLSEEAERLLGEYAKERWGSDW-----LFV-----TRYPRSVRPFYTYPEED-------- 331

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
                  +DL+  G EI SGG R H  E +L++    G+        F G    F+ GMP
Sbjct: 332 --GTTRSFDLLFRGLEITSGGQRIHRYEELLESLKAKGMDP----EAFQGYLEVFKYGMP 385

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PHGG A G +R+   LLG  NVR    FP  ++    
Sbjct: 386 PHGGFAIGAERLTQKLLGLPNVRYARAFPRDRHRLTP 422


>gi|307178011|gb|EFN66872.1| Asparaginyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 1713

 Score =  166 bits (419), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/348 (18%), Positives = 126/348 (36%), Gaps = 23/348 (6%)

Query: 14   VSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            ++     V+L GWVHR+R  G  + F+ +RD  G  Q V          A ++ +E  + 
Sbjct: 1286 LNHRDQRVKLFGWVHRLRRQGKALMFIMLRDGTGFLQCVLTDKLCQTYDALTLATEAAVQ 1345

Query: 73   IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
            + G +                 EL     +++  +           E    ++   R + 
Sbjct: 1346 LFGTLKIVPEG----KNAPDGHELHVDYWKLIGSSPPGGADSILNEEALPDVQLDNRHIM 1401

Query: 133  LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            +R +   K ++ R+ ++ + R       + E + P L  +  EG           + +F 
Sbjct: 1402 IRGENTSKVLIMRSILVQAFRDHYRDRGYYEVTPPTLVQTQVEGGSTLFKLDYFGENAF- 1460

Query: 193  ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-------- 244
             L Q+ Q Y +  M       + +A  +R E  R+ R   E+  ++ E  F+        
Sbjct: 1461 -LTQSSQLYLETCMP-AMGDVYCVAQSYRAEQSRTRRHLAEYTHIEAECPFIMFDDLLDR 1518

Query: 245  EQDDILNTMENVLR----GVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             +D I + +E VL+     + +E +         F R+ Y DAI  Y  +    +     
Sbjct: 1519 LEDLICDVVERVLQSPFGHLVQELNPGFQIPKRPFKRMNYTDAIE-YLRENNITKEDGSF 1577

Query: 300  HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR-AFCDRMNE 346
            +   E       R  +  ++       + +  K     R A  +R+ E
Sbjct: 1578 YEFGEDIPEMPERKMTDAINEPILLCRFPVEIKSFYMQRCAENERLTE 1625



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 484  LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
            L+ N  EI  G +R    E +L+ +    I        +       + G  PHGG   G+
Sbjct: 1630 LLPNVGEIVGGSMRIWNYEELLEGYKRENIDPTP----YYWYTDQRKYGSCPHGGYGLGL 1685

Query: 544  DRIVMLLLGAKNVREVSLFPM 564
            +R +  LL   ++REV L+P 
Sbjct: 1686 ERFLCWLLNRYHIREVCLYPR 1706


>gi|195027183|ref|XP_001986463.1| GH21379 [Drosophila grimshawi]
 gi|193902463|gb|EDW01330.1| GH21379 [Drosophila grimshawi]
          Length = 533

 Score =  166 bits (419), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 105/269 (39%), Gaps = 23/269 (8%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP----DSACFEIAKSVRSEWVLCIDGLV 77
            + G VH  R  G   FL +R      Q +            + A ++  E ++ I    
Sbjct: 92  WVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGDVISKQMVKFAGNIPKESIIDIQAKA 151

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--------------S 123
           ++        +     +EL  ++I ++S A+        +   PE               
Sbjct: 152 VAVP--NRIESCTEQLLELFIEQIFVISQAKAQLPLQIEDASRPENADDADGLNIRVNQD 209

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
            R   R LDLR             +    R  +  + F E  TP + +++ EG  +    
Sbjct: 210 TRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTDQGFTEIHTPKIISAASEGGANVFTV 269

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           S     ++ A  Q+PQ YKQ+ +A+ FD+ + +   FR ED  + R   EF  LD+EM+F
Sbjct: 270 SYFKDSAYLA--QSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLEMAF 327

Query: 244 V-EQDDILNTMENVLRGVFEEFSNGNTVS 271
                ++L+T+ N    +F+   +  +  
Sbjct: 328 KYHYHEVLHTIGNTFTAIFKGLRDKYSRE 356



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   +  PF                 I +  YD+   G EI SG  R H  E +++   +
Sbjct: 425 KFPLSIRPFYTMPD--------PSNPIYSNSYDMFMRGEEILSGAQRIHDPEYLIERAKH 476

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I       +      +F+ G PPH G   G++R+VML LG  N+R+ S+FP       
Sbjct: 477 HNIDTT----KIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLT 532

Query: 571 L 571
            
Sbjct: 533 P 533


>gi|313678766|ref|YP_004056506.1| lysine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950672|gb|ADR25267.1| lysine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 489

 Score =  166 bits (419), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/333 (19%), Positives = 123/333 (36%), Gaps = 35/333 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFE 60
           +Y + S  +L   ++   V   G +  VR      FL ++D  G+ QV  N   D    +
Sbjct: 44  KYSSFSREELEEKNISINVT--GRLMTVRGP----FLVLKDSKGLIQVYFNKKSDENLAK 97

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I  +     +L + G +M            T  + L   KIE+L+ A + PLP       
Sbjct: 98  IVATFDIGDILWVSGTIM---------KTHTDALTLKCNKIELLTKALK-PLPEKYHGLV 147

Query: 121 PESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
               R++ R++DL  +   KN  + RT+I+  ++      +++E  TP L       A  
Sbjct: 148 DTEERYRRRWVDLITNDESKNKFILRTKIVKWIKEYFDNLDYLEVETPFLQDYVSGAAAK 207

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  +    + L  A +   +  +  G +R +++   FR+E   +   P EF  ++ 
Sbjct: 208 PFTTHHNSLNQEFVLRIATEIPLKKCVVGGLERVYELGRIFRNEGYDTTHNP-EFTTIEF 266

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
             ++   + +++  E + + + ++      V+N                   DL  P   
Sbjct: 267 YEAYSNVEGMMDRTEELFKVLCQKLGKSVFVNNGI---------------AIDLSQPFKR 311

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
            N+ +       + F  I       E      K
Sbjct: 312 VNMVDAVNEKTGKDFRNISLDEAILEAKKHNIK 344



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 7/161 (4%)

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
             F + + D     A++  I     +    I++   YE   E   I          +   
Sbjct: 324 KDFRNISLDEAILEAKKHNIKIEKFWTTGHIINA-LYEELVESSLIQPTFIYGHPIEVSP 382

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG-- 524
            S K +D       + +L  N  E A+           L+ F +    K+   +      
Sbjct: 383 LSAKSSDPR--FTERAELFINTKEYANMYTELSDPIDQLERFKSQIDEKKAGNDEASDID 440

Query: 525 --LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                A + GMPP GG   GIDR++MLL    ++R+V LFP
Sbjct: 441 WDFVDALEYGMPPTGGCGIGIDRLIMLLTETSSIRDVLLFP 481


>gi|71417041|ref|XP_810455.1| lysyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70874987|gb|EAN88604.1| lysyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 580

 Score =  166 bits (419), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 103/256 (40%), Gaps = 17/256 (6%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVA---NPDSACFEIAKSVRSEWVL 71
           V   V ++G +   R  G  + FL ++ D   +  + A     D     +   +R   ++
Sbjct: 105 VEEVVAIAGRIVNKRSSGSKLNFLTLQGDADTVQVISAISDYVDDTFAAVHGRIRRGDII 164

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G         + +   TG+  ++A +I +LS      LP           RF+ R+L
Sbjct: 165 GVKG---------VASLSKTGEFSMNAFEITLLSTCY-HMLPDGWYGLSSIEQRFRQRYL 214

Query: 132 DLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           D   +    +  V R+++I  +R      NF+E  TP+L   +   A    +        
Sbjct: 215 DFIVNRENIQTFVTRSKVIRYIRNFFEDLNFLEVETPVLNQIAGGAAARPFITHHNELNQ 274

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  AP+ Y + L+  G DR +++   FR+E       P EF  ++   ++ + +D +
Sbjct: 275 RMYLRIAPELYLKELVVGGMDRVYELGKQFRNEGIDLTHNP-EFTSVEAYWAYADYNDWM 333

Query: 251 NTMENVLRGVFEEFSN 266
            T E++  G+      
Sbjct: 334 RTTEDLFYGLAMHIHG 349


>gi|297518702|ref|ZP_06937088.1| lysyl-tRNA synthetase [Escherichia coli OP50]
          Length = 260

 Score =  166 bits (419), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 19/226 (8%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L              +   V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 42  RDHTSEQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 101

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           DS    +      +W L   G ++            TG++ +   ++ +L+ A   PLP 
Sbjct: 102 DSLPEGVYNDQFKKWDL---GDIIGARGTLF--KTQTGELSIHCTELRLLTKALR-PLPD 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
                  + +R++ R+LDL   D   +  V R++I+ ++R  M+A  F+E  TP++    
Sbjct: 156 KFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIP 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
               AR F+          Y L  AP+ Y + L+  GF+R F+I  
Sbjct: 216 GGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINR 260


>gi|68535359|ref|YP_250064.1| lysyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|68262958|emb|CAI36446.1| lysyl-tRNA synthetase [Corynebacterium jeikeium K411]
          Length = 551

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 71/333 (21%), Positives = 136/333 (40%), Gaps = 16/333 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G +  +R  G + F  ++D  G          +  E+ +   + W   +D G  + 
Sbjct: 99  VSVTGRLIFMRNTGKLCFATLQDGDGTQ---LQAMLSLAEVGEDALAAWKADVDLGDFIG 155

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTL 138
            +   I +    G++ + A +  + + A       F   E  E  R + R+ DL  R+  
Sbjct: 156 VTGRVIASR--RGELSVMASEWVMAAKALRPLPVAFA--EMNEETRVRQRYNDLIVREEA 211

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            KN + R ++I ++R  M  E F+E  TP+L        AR F+  S       Y L  A
Sbjct: 212 RKNAMTRVKVIRALRDYMEGEGFVEIETPMLQTLHGGAAARPFVTHSNALDIDLY-LRIA 270

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ + +  +  G DR F+I   FR+E       P EF  L+   ++ + DD   T    +
Sbjct: 271 PELFLKRAVVGGIDRVFEINRNFRNEGVDKSHSP-EFAMLETYAAWGDYDDCARTTRESI 329

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN--VTEHFVHSEFRVFS 315
           + + ++ + G  +         D     +G +  ++     ++     ++    E  + S
Sbjct: 330 QYIVDQLTKGTDLEGTGKVRLADGTEFDFGGEWKEIEMYPSLNEALARKYPGQPEVTIDS 389

Query: 316 KILSVNPGYEVWA--IPAKGGGGNRAFCDRMNE 346
            +  +    +V    +PAKGG G+    + + E
Sbjct: 390 TVEELKEIAKVIGLDVPAKGGWGHGKLVEEIWE 422



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 5/100 (5%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 ++DL   GFE+A+G        +  + F +        ++           A +
Sbjct: 452 KPGVTEKWDLYVRGFELATGYSELIDPVIQRERFEDQARLAANGDDEAMRLDEDFLAAME 511

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GMPP  G   GIDR++M L G   +RE  LFP+ +   D
Sbjct: 512 QGMPPTAGTGMGIDRLLMALTGLG-IRETVLFPIVKPERD 550


>gi|325967662|ref|YP_004243854.1| asparaginyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323706865|gb|ADY00352.1| asparaginyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 429

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/308 (21%), Positives = 123/308 (39%), Gaps = 26/308 (8%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPDSACFEIAKSVR 66
           S  D+   + G  V + GWV+R R     +FL +RD  GI Q V++  D    +I   + 
Sbjct: 2   SIKDVFSLNEGIEVTIRGWVYRKRELKDKVFLVVRDGSGIIQTVISKSDPNLLDIVSKLN 61

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  L + G+V              G  E+  + I    V    P+      +       
Sbjct: 62  MESSLVLTGVVKKEQR-------APGGAEIHVKSINWYYVGYSFPI-NEDAAKADSEYLL 113

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L +R   +   +  R  +  ++     + ++ E   P+  +++ EG          
Sbjct: 114 DVRHLWVRSRRMWAVLRVRHTVFGAIHEFFRSRDYYEVQGPMFVSAAVEGGATLFPVKYF 173

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           ++   Y L Q+ Q Y ++L+    +R + IAP FR E  R+ R   EF+  + E ++++ 
Sbjct: 174 DREDVY-LTQSSQFYLEILI-YALERVYTIAPSFRAESSRTRRHLTEFWHAEAEEAWLQF 231

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRYGTDKP 291
           +D+LN +E+++  V ++                         F R+ YD+AI    +   
Sbjct: 232 NDLLNLLEDLITYVVDKVLKERQDELKLLNRDTKVLENVKPPFYRVSYDEAIEILRSKGL 291

Query: 292 DLRNPIIM 299
            ++    +
Sbjct: 292 KIKWGDDI 299



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  GG R +  E +L      G+        +       + G  PH G   GIDR+VM 
Sbjct: 352 EIVGGGERIYDYEELLGKIKKFGLRP----EDYDWYLDLRRYGSVPHAGFGLGIDRLVMW 407

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
           + G  ++R+   FP        
Sbjct: 408 VCGLDHIRDAVPFPRDIRRVKP 429


>gi|296439733|sp|A0QYV1|LYSX_MYCS2 RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
          Length = 1106

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 114/254 (44%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +  G  + ++G V R+R +GG++F  +RD  G  Q++   D+A     ++ 
Sbjct: 649 SHTVAQALGATDGETLSVAGRVMRIRDYGGVLFAQLRDWSGEVQLLL--DNAALTEGETA 706

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                + +  LV    +   + N   G   L  ++  ++      PLP   +    +  R
Sbjct: 707 DFTATIDLGDLVEVTGSMGFSRN---GTRSLLVERWRLIGKCLR-PLPDKWKGLTDQEAR 762

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
            + R++DL  +T  +++++ R+  ++++R  + ++ F+E  TPIL        AR FL  
Sbjct: 763 VRARYVDLAVNTEARDLIRARSGALHAIRETLYSKGFLEVETPILQQIHGGANARPFLTH 822

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 823 INAYDLDLY-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 880

Query: 244 VEQDDILNTMENVL 257
            + +  ++    ++
Sbjct: 881 ADYNVWIDGCRELI 894



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 62/188 (32%), Gaps = 28/188 (14%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
            +    E I    ++ +       AG P      A      + + L  +     E  +  D
Sbjct: 938  SEAIGEHITPETELGELRRLCDSAGIPYLTHWDAGAVVLEMYEHL--VEDRTTEPTFYKD 995

Query: 440  FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
            FP             + +P T P   +            A ++DLV  G E+ +      
Sbjct: 996  FP------------TSVSPLTRPHRSIP---------GVAERWDLVAWGVELGTAYSELT 1034

Query: 500  MSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                  +      +                 +A +  MPP GG+  G+DR+VM++ G  +
Sbjct: 1035 DPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRVVMMITGR-S 1093

Query: 556  VREVSLFP 563
            +RE   FP
Sbjct: 1094 IRETLPFP 1101


>gi|118468939|ref|YP_888089.1| lysyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118170226|gb|ABK71122.1| lysyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 1089

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 114/254 (44%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +  G  + ++G V R+R +GG++F  +RD  G  Q++   D+A     ++ 
Sbjct: 632 SHTVAQALGATDGETLSVAGRVMRIRDYGGVLFAQLRDWSGEVQLLL--DNAALTEGETA 689

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                + +  LV    +   + N   G   L  ++  ++      PLP   +    +  R
Sbjct: 690 DFTATIDLGDLVEVTGSMGFSRN---GTRSLLVERWRLIGKCLR-PLPDKWKGLTDQEAR 745

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
            + R++DL  +T  +++++ R+  ++++R  + ++ F+E  TPIL        AR FL  
Sbjct: 746 VRARYVDLAVNTEARDLIRARSGALHAIRETLYSKGFLEVETPILQQIHGGANARPFLTH 805

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 806 INAYDLDLY-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 863

Query: 244 VEQDDILNTMENVL 257
            + +  ++    ++
Sbjct: 864 ADYNVWIDGCRELI 877



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 62/188 (32%), Gaps = 28/188 (14%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
            +    E I    ++ +       AG P      A      + + L  +     E  +  D
Sbjct: 921  SEAIGEHITPETELGELRRLCDSAGIPYLTHWDAGAVVLEMYEHL--VEDRTTEPTFYKD 978

Query: 440  FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
            FP             + +P T P   +            A ++DLV  G E+ +      
Sbjct: 979  FP------------TSVSPLTRPHRSIP---------GVAERWDLVAWGVELGTAYSELT 1017

Query: 500  MSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                  +      +                 +A +  MPP GG+  G+DR+VM++ G  +
Sbjct: 1018 DPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRVVMMITGR-S 1076

Query: 556  VREVSLFP 563
            +RE   FP
Sbjct: 1077 IRETLPFP 1084


>gi|42560629|ref|NP_975080.1| lysyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|81400864|sp|Q6MUG2|SYK_MYCMS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|42492125|emb|CAE76722.1| Lysine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301321327|gb|ADK69970.1| lysine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 500

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/333 (18%), Positives = 132/333 (39%), Gaps = 20/333 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFE 60
            +Y+ +S  DL   +    V ++G +   R  G    F++I D     Q+    D    +
Sbjct: 45  EKYKDYSKEDLLNLNQ-ELVVVAGRIKLYREAGKKAAFVNIDDQDSSIQLYVRLDEIGDQ 103

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             +  R+  +  I G+      + I      G++ +  +++ +LS A           + 
Sbjct: 104 SFEDFRNFDLGDIIGV------KGIMMRTDHGELSIRCKEVVLLSKALRPLPDKHAGIQD 157

Query: 121 PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGAR 178
            E   ++ R++DL  +  + K    RT+II +++  +  + ++E  TPIL +      A+
Sbjct: 158 IEEK-YRRRYVDLIVNHDVRKTFQARTKIIRTLQNFLDNKGYMEVETPILHSLKGGASAK 216

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+    V     Y L  A + + + L+  GF+  ++I   FR+E   +   P EF  ++
Sbjct: 217 PFITHYNVLNTDVY-LRIATELHLKRLIVGGFEGVYEIGRIFRNEGMSTRHNP-EFTSIE 274

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------P 291
           + +++ +   ++N  E + R      ++ + +  N ++I      +R             
Sbjct: 275 LYVAYEDMFFLMNLTEEIFRVCNAAVNSNSIIEYNNVKIDLSKPFKRLHMVDGIKQVTGV 334

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
           D    + +    E     +  V     SV    
Sbjct: 335 DFWKEMTVQQALELAKKHKVHVEKHQESVGHII 367



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 4/125 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  I      +  P+      K N        +++L   G E A+     +      + F
Sbjct: 376 ESTIVEPTFVYGHPKEISPLAKSNPSDPRFTDRFELFILGREYANAFSELNDPIDQYERF 435

Query: 509 SNV----GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                      +   +       A +  MPP  GI  GIDR+VMLL  ++++++V LFP 
Sbjct: 436 KAQIEEESKGNDEANDMDIDFIEALEHAMPPTAGIGIGIDRLVMLLTNSESIKDVLLFPQ 495

Query: 565 SQNFC 569
            +   
Sbjct: 496 MKPRE 500


>gi|208809240|ref|ZP_03251577.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208729041|gb|EDZ78642.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
          Length = 464

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 68/384 (17%), Positives = 126/384 (32%), Gaps = 50/384 (13%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V S V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDV----LRLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +     Q E+   K+E+    E+        + +      +   L  R 
Sbjct: 72  CSVIVTGKVVASPGQGQQFEIQTSKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++        
Sbjct: 132 NLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + F  +P FR E+  + R   EF+ L+
Sbjct: 192 QGKVDFDKDFFGKESFLTVSGQLNGETYACALSK-FIPSPTFRAENSNTSRHLAEFWMLE 250

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRI 277
            E++F   +DI    E +L+ VF+                            +  +F ++
Sbjct: 251 PEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQV 310

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
            Y +A+             ++  ++ +EH  +     F   + V    +           
Sbjct: 311 DYTEAVTILENCGRKFETGLLGVDLSSEHERYLAEEHFKAPVVVKNYPKDI-----KAFY 365

Query: 337 NRAFCDRMNEWARSQGQPGLAYIF 360
            R   D     A     PG+  I 
Sbjct: 366 MRLNEDGKTVAAMDVLAPGIGEII 389



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+ +    +G++K      +      
Sbjct: 368 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDERMLEMGLNK----EDYWWYRDL 421

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 422 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 460


>gi|296242398|ref|YP_003649885.1| asparaginyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296094982|gb|ADG90933.1| asparaginyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 432

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/286 (21%), Positives = 120/286 (41%), Gaps = 22/286 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
               VG    + GW++R    GG  F+ +RD  G+ QVV        E+  S+++   + 
Sbjct: 11  NREYVGKEACIRGWIYRRSVVGGKAFVRVRDSTGVIQVVVESSRLGEELVDSLKN---IG 67

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           ++  V++   E        G  EL A+  +I+  + + P+    +    +      R L 
Sbjct: 68  LEASVIAC-GEVKEEAKAPGGFELQAKFFQIVGDSRDFPI----KGGEGDEYLLNMRHLW 122

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R          +  +IN+ R       + E + PILTAS+ EG          +Q +F 
Sbjct: 123 IRSPRYASLFKIKHTVINAGREYFSKNGWWEVTPPILTASACEGGATLFPVQYFDQTAF- 181

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y ++L+ +  ++ + + P FR E  R+ R   E++ L+ E ++ + +D++  
Sbjct: 182 -LSQSAQLYLEVLIYT-LEKVYSLTPSFRAEKSRTRRHLAEYWHLEPEAAWYDMNDMMKV 239

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            E ++  +  +  +                +  +G D   LR  + 
Sbjct: 240 AEELVSYIVSKVLDERKRE-----------LEEFGRDIGKLRKALE 274



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 9/120 (7%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG--IRNHMSEVM 504
           E E      H P  +       +  ++   +    +DL+         G   R    +++
Sbjct: 313 EFETPFFLTHFPKHIKS-FYMKVDPSNPKVVLG--FDLLAPEGYGEIIGGGQREDDYKLL 369

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           L+     G + +  +          + G  PH G   GI+RIVM + G  ++RE   FP 
Sbjct: 370 LERLIEQGYNPDDYK----WYLDLRKYGSVPHSGFGLGIERIVMWITGLDHIRETMPFPR 425


>gi|88855926|ref|ZP_01130588.1| aspartyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88814793|gb|EAR24653.1| aspartyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 479

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 71/296 (23%), Positives = 121/296 (40%), Gaps = 26/296 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV----VANPDSACFE 60
           RT    +L  +  G+   +SGWV  VR    + F+ +RD  G  Q+      N D    E
Sbjct: 41  RT-LIKNLAAATDGAT-SVSGWVDTVRDQKKVQFVVLRDESGAVQLVHPRSFNEDGTPAE 98

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A    +   L     + +      +  +  G +E+    IE+   A           + 
Sbjct: 99  DA-LAETISGLAQGTFLTATGELKHDERVKLGGVEIKLDGIELAGEAIAETPIA---EDS 154

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               R  +RFLDLR          +T + ++ R   +  +FIE  TP L AS+ E   + 
Sbjct: 155 SVDKRMDWRFLDLRVPRNSLIFRIQTTLEHAWRTYWVENDFIEVHTPKLMASASESNAEL 214

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 +  ++ A  Q+PQ +KQ+  A+GF + F+IAP FR +   + R   EF  +D E
Sbjct: 215 FEVEYFDTKAYLA--QSPQFFKQMAQAAGFGKIFEIAPSFRADPSFTSRHATEFTMVDNE 272

Query: 241 MSFVE-QDDILNTMENVLRGVFEEFSNGNTVS-------------NNFLRICYDDA 282
           +S+++  +D++   E ++   F+     +                  F RI   +A
Sbjct: 273 ISWIDSHEDVMKMHEELMVVGFQAVKEKHGEEIEKLFGIELTVPTTPFPRIPLAEA 328



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 26/131 (19%)

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
             +F ++ D               +  PF  M       L  +         YDLV NG 
Sbjct: 363 RHDFVFLTD------------YAASIRPFYHMRHADDAELTNS---------YDLVYNGV 401

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI++G  R H  +V+       G+    ++         F+ G+PPHGG   G+ R++ML
Sbjct: 402 EISTGAQREHRVDVLEAQIRAKGMDPAELD----FYLDFFRYGVPPHGGFGMGLGRVLML 457

Query: 550 LLGAKNVREVS 560
           +LG  N+RE +
Sbjct: 458 MLGLPNLREAT 468


>gi|291231216|ref|XP_002735562.1| PREDICTED: asparaginyl-tRNA synthetase-like [Saccoglossus
           kowalevskii]
          Length = 562

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/293 (22%), Positives = 114/293 (38%), Gaps = 21/293 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            + V++ GWVHR+R  G  + F+ +RD  G  Q V +        A S+ +E  + + G 
Sbjct: 139 DTRVKVLGWVHRLRRQGKALMFIILRDGTGYLQCVCSDLLCQSYEALSLSTESTVFVCGT 198

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  EL     E++S A    +      E    ++   R + +R +
Sbjct: 199 IKEVPDG----KSAPGGHELIVDYWELVSAAPAGGIDNILNEESHVDVQLDNRHMMIRGE 254

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            L K +  R+ +    R      ++ E   P L  +  EG       +   + S+  L Q
Sbjct: 255 NLSKILKIRSVVTQCFRDHYFNNSYFEIFPPTLVQTQVEGGSTLFKLNYFGEESY--LTQ 312

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  + S     F IA  +R E  R+ R   E+  ++ E SF+  DD+LN +E++
Sbjct: 313 SSQLYLETALPS-MGDVFCIASSYRAEQSRTRRHLSEYTHVEAECSFICFDDLLNRIESL 371

Query: 257 LRGVFEEFSN-------------GNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +  V E   N                    F R+ Y +AI      +    + 
Sbjct: 372 VCDVVERALNSPVGQLIKELHPEFKPPKRPFKRMNYSEAIVYLREHEIKKEDD 424



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   +E +L  +   GI        +       + G  PHGG   G+
Sbjct: 479 LMPNVGEIVGGSMRIWDNEELLAGYKREGIDPTP----YYWYTDQRKYGSCPHGGYGLGL 534

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R +  LL   ++R+V L+P     C  
Sbjct: 535 ERFLTWLLNRPHIRDVCLYPRFTGRCKP 562


>gi|226356057|ref|YP_002785797.1| asparaginyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|259511567|sp|C1CV26|SYN_DEIDV RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|226318047|gb|ACO46043.1| putative asparagine--tRNA ligase (asparagine translase)
           [Deinococcus deserti VCD115]
          Length = 445

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 60/300 (20%), Positives = 105/300 (35%), Gaps = 14/300 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWV 70
              VG  V L  W+      G I FL +RD  G  Q      + +   FE AK +  E  
Sbjct: 9   KQHVGETVTLQAWLTDKSGKGKIQFLKLRDGSGFVQATVFKNDVEEEVFESAKRLTQEQA 68

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L + G V +            G +ELS +++  +S  E         +E+        R 
Sbjct: 69  LTLTGEVRADER-------APGGVELSVRRLSPIS--ENHAEYPITPKEHGIEFLMDQRH 119

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R  +  ++     +E F+    P  T ++ EG  +        +  
Sbjct: 120 LWLRHRRPWAIMRIRDCVQRAIVDFFHSEGFVRFDAPFFTPNAAEGTTELFEIDLFGEDK 179

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q  Q +     A  F + +   P FR E  ++ R   EF+ ++ E++       +
Sbjct: 180 AY-LSQTGQLH-AEAGAFAFGKVYTFGPTFRAEKSKTRRHLLEFWMVEPEVAPSNHKQNM 237

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           +  E  +  +     +  TV    L             + P +     +  V +H  + +
Sbjct: 238 DLQERFVSFLVRRALDECTVELEMLGRDLSKLKGAAEGNYPRVTYTEALEIVRQHIENKD 297



 Score = 70.5 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 39/115 (33%), Gaps = 10/115 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A   F M     +S        I    Y       EI  G  R H  +++     +
Sbjct: 335 KYPAAIKAFYMQPDPEDSRVALCDDMIAPEGY------GEIIGGSERIHDYDLLKSRIEH 388

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G+        F       + G  PH G   G++R++  + G  ++RE   FP  
Sbjct: 389 EGLPL----EAFDWYLDLRRVGSVPHAGFGMGLERVIAWISGIDHIREAIPFPRM 439


>gi|256384301|gb|ACU78871.1| lysine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385134|gb|ACU79703.1| lysine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296456023|gb|ADH22258.1| lysine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 500

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 124/290 (42%), Gaps = 13/290 (4%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFE 60
            +Y+ +S  DL   +    V ++G +   R  G    F++I D     Q+    D    +
Sbjct: 45  EKYKDYSKEDLLNLNQ-ELVVVAGRIKLYREAGKKAAFVNIDDQDSSIQLYVRLDEIGDQ 103

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             +  R+  +  I G+      + I      G++ +  +++ +LS A           + 
Sbjct: 104 SFEDFRNFDLGDIIGV------KGIMMRTDHGELSIRCKEVVLLSKALRPLPDKHAGIQD 157

Query: 121 PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGAR 178
            E   ++ R++DL  +  + K    RT+II +++  +  + ++E  TPIL +      A+
Sbjct: 158 IEEK-YRRRYVDLIMNHDVRKTFQARTKIIRTLQNFLDNKGYMEVETPILHSLKGGASAK 216

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+    V     Y L  A + + + L+  GF+  ++I   FR+E   +   P EF  ++
Sbjct: 217 PFITHYNVLNTDVY-LRIATELHLKRLIVGGFEGVYEIGRIFRNEGMSTRHNP-EFTSIE 274

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           + +++ +   +++  E + R      ++ + +  N ++I      +R   
Sbjct: 275 LYVAYEDMFFLMDLTEEIFRVCNAAVNSSSIIEYNNVKIDLSKPFKRLHM 324



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 4/104 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV----GISKEVVENRFGGL 525
           K N        +++L   G E A+     +      + F           +   +     
Sbjct: 397 KSNPSDPRFTDRFELFILGREYANAFSELNDPIDQYERFKAQIEEESKGNDEANDMDIDF 456

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             A +  MPP  GI  GIDR+VMLL  ++++++V LFP  +   
Sbjct: 457 IEALEHAMPPTAGIGIGIDRLVMLLTNSESIKDVLLFPQMKPRE 500


>gi|224004380|ref|XP_002295841.1| aspartate-tRNA ligase or aspartyl tRNA synthetase [Thalassiosira
           pseudonana CCMP1335]
 gi|209585873|gb|ACI64558.1| aspartate-tRNA ligase or aspartyl tRNA synthetase [Thalassiosira
           pseudonana CCMP1335]
          Length = 480

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 74/320 (23%), Positives = 122/320 (38%), Gaps = 27/320 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHY--GITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           GS V L G V+ +R  GG  FL +R +    I            + AK ++    L  + 
Sbjct: 27  GSKVWLRGRVNSIRAKGGSCFLVLRQNSFDTIQACYFKDKENPEQSAKMLKYLKSLTTES 86

Query: 76  LVMSRSAETINANIITGQI---ELSAQKIEILSVAEELPLP-----VFGEREYPE----- 122
           ++     E   A + +  I   EL   +I  +S A+ +           E+E  E     
Sbjct: 87  MIDL-EGEVSTAEVRSCSIQDAELVITRIHSVSNADAMLPFLVEDAARSEKEVEESQETD 145

Query: 123 --------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                    +R   R+LDLR    +  +  ++ +    R  + ++ F+E  TP L A   
Sbjct: 146 RPFPRLGQELRLDNRWLDLRAPANNAIMRIQSAVCQLFRESLYSQGFVEIHTPKLIAGES 205

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           E              +   L Q+PQ YKQ+ ++S  DR F+I P FR E+  + R   EF
Sbjct: 206 ESGAGVFTTDYFGTTA--CLAQSPQLYKQMAISSDLDRVFEIGPVFRAENSHTRRHLCEF 263

Query: 235 YQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
             LD+EMS  E   + L  +  + + +FE            +R  Y+     +  +   L
Sbjct: 264 TGLDLEMSINEHYMETLEVVHKMFKHIFENLETRWARELEVIRTQYESEPVTFTDEPCVL 323

Query: 294 RNPIIMHNVTEHFVHSEFRV 313
             P  M  +          +
Sbjct: 324 HWPEAMEILRGEGFDMGDGL 343



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 57/135 (42%), Gaps = 19/135 (14%)

Query: 438 MDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
            DF   +      K      PF TMP    +           +  YD+   G EI SG  
Sbjct: 364 TDFFMLD------KYPSDIRPFYTMPDPTDDRF---------SNSYDMFIRGQEICSGAQ 408

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  E++ +  +  GI    + +       +F+ G+ PH G   G++R+V L LG  NV
Sbjct: 409 RCHDPELVTEIINKKGI---EIGDGLKTYIDSFRHGVSPHAGAGIGLERVVFLYLGLDNV 465

Query: 557 REVSLFPMSQNFCDL 571
           R+ S+FP   N C  
Sbjct: 466 RKASMFPRDPNRCTP 480


>gi|169612822|ref|XP_001799828.1| hypothetical protein SNOG_09538 [Phaeosphaeria nodorum SN15]
 gi|160702592|gb|EAT82803.2| hypothetical protein SNOG_09538 [Phaeosphaeria nodorum SN15]
          Length = 609

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 108/268 (40%), Gaps = 13/268 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVV----ANPDSACFEIAKSVR 66
           G ++    +R+   V   R     +   +   +   I  +     +  D+   +  ++++
Sbjct: 118 GETEPDKEIRIGLRVITQRSASNALHFYVCKAEGTTIQVMCQLQESKADTPFEKQHENIQ 177

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ + G        T       G++ + A+++ +L+    + LP        +  R 
Sbjct: 178 RGDIIGVIGF----PGRTSPKKGGEGELSIFAREVILLTPCLRM-LPTEHFGYKDQEQRH 232

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL  +   +N  + R++I+  +R  +   +F+E  TP++   +            
Sbjct: 233 RNRYLDLIMNDSTRNTFITRSKIVKYVRKYLDERDFLEVQTPMMNKIAGGATAKPFKTYH 292

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                   L  AP+ Y + L+  G +R +++   FR+E       P EF   +  M++ +
Sbjct: 293 NELDMELFLRIAPELYLKELVVGGLERVYEMGRQFRNEGIDLTHNP-EFTTCEFYMAYAD 351

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN 273
             D+++  E ++  + +E +     + +
Sbjct: 352 YKDVMDMTEEMVSELVKEVTGSYETTFH 379



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 12/115 (10%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++      EI +     +        F      K+  +           ++ + 
Sbjct: 483 PGLCERFEAFVCKKEICNAYTELNDPFDQRLRFEEQANQKDQGDEEAQLIDETFCQSLEY 542

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP--------MSQNFCDLLMGSPST 578
           G+PP GG   GIDR+VM L    +++EV  FP         S+   +++  +P  
Sbjct: 543 GLPPTGGWGMGIDRLVMFLTDNYSIKEVLTFPFMKDVVEEKSKTAAEVVDVTPKP 597


>gi|55981421|ref|YP_144718.1| aspartyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|30749602|pdb|1N9W|A Chain A, Crystal Structure Of The Non-Discriminating And Archaeal-
           Type Aspartyl-Trna Synthetase From Thermus Thermophilus
 gi|30749603|pdb|1N9W|B Chain B, Crystal Structure Of The Non-Discriminating And Archaeal-
           Type Aspartyl-Trna Synthetase From Thermus Thermophilus
 gi|304445796|pdb|3KFU|A Chain A, Crystal Structure Of The Transamidosome
 gi|304445797|pdb|3KFU|B Chain B, Crystal Structure Of The Transamidosome
 gi|304445798|pdb|3KFU|C Chain C, Crystal Structure Of The Transamidosome
 gi|304445799|pdb|3KFU|D Chain D, Crystal Structure Of The Transamidosome
 gi|7385087|gb|AAF61689.1| aspartyl-tRNA synthetase 2 [Thermus thermophilus]
 gi|55772834|dbj|BAD71275.1| non-discriminating and archaeal-type aspartyl-tRNA synthetase
           [Thermus thermophilus HB8]
          Length = 422

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 77/307 (25%), Positives = 137/307 (44%), Gaps = 36/307 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            + VG  V L G++H  R  G I FL +RD  G+ QVV           K    E  L +
Sbjct: 9   KAHVGQEVELLGFLHWRRDLGRIQFLLLRDRSGVVQVVTGG-------LKLPLPESALRV 61

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YPESIRFKYRFL 131
            GLV+  +          G +E+ A+++E+LS A E       + E         +YR++
Sbjct: 62  RGLVVENAK-------APGGLEVQAKEVEVLSPALEPTPVEIPKEEWRANPDTLLEYRYV 114

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR +     +  +  ++   R  +  ++F E  TP +  +  EG           + ++
Sbjct: 115 TLRGEKARAPLKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGAEGGSGLFGVDYFEKRAY 174

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDIL 250
            A  Q+PQ YKQ +M   F+R +++AP +R E+  + R   E+  LD+EM F+ +++D++
Sbjct: 175 LA--QSPQLYKQ-IMVGVFERVYEVAPVWRMEEHHTSRHLNEYLSLDVEMGFIADEEDLM 231

Query: 251 NTMENVLRGVFEEFSN------------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              E +L  + EE  N              +   +  R+ + +A R     K +L  P+ 
Sbjct: 232 RLEEALLAEMLEEALNTAGDEIRLLGATWPSFPQDIPRLTHAEAKRIL---KEELGYPV- 287

Query: 299 MHNVTEH 305
             +++E 
Sbjct: 288 GQDLSEE 294



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 56/157 (35%), Gaps = 24/157 (15%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           D      + LG      +   W      +       +   +  PF               
Sbjct: 290 DLSEEAERLLGEYAKERWGSDW-----LFV-----TRYPRSVRPFYTYPEED-------- 331

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
                  +DL+  G EI SGG R H  E +L++    G+        F G    F+ GMP
Sbjct: 332 --GTTRSFDLLFRGLEITSGGQRIHRYEELLESLKAKGMDP----EAFHGYLEVFKYGMP 385

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PHGG A G +R+   LLG  NVR    FP  ++    
Sbjct: 386 PHGGFAIGAERLTQKLLGLPNVRYARAFPRDRHRLTP 422


>gi|325675034|ref|ZP_08154721.1| lysine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325554620|gb|EGD24295.1| lysine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 506

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/268 (22%), Positives = 105/268 (39%), Gaps = 18/268 (6%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  ++          S  G  V + G V  VR  G + F  +++  G         +
Sbjct: 43  RTHSLAEIRAKYPDLEPDSSTGEQVGVVGRVIFVRNTGKLCFATLQEGDGTQLQAMLSLA 102

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E A +     V    G  +    E I++    G++ + A   ++   A+ L      
Sbjct: 103 NVGEDALAAWKSDVDL--GDFVFVHGEVISSR--RGELSVMADTWQM--AAKSLRPMPVA 156

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
            +E  E  R + R+ DL  R        KR  ++  +R  +    F+E  TP+L      
Sbjct: 157 HKEMSEESRVRQRYADLIIRPEARDMARKRVAVVRELRNALERRGFLEVETPMLQTLHGG 216

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+  S       Y L  AP+ + +  +  G ++ F+I   FR+E   S   P EF
Sbjct: 217 AAARPFVTHSNALDIDLY-LRIAPELFLKRCVVGGIEKVFEINRNFRNEGVDSTHSP-EF 274

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFE 262
             L+   ++   DD    +  +++ V +
Sbjct: 275 AMLETYEAYGTYDDSAKMIRELVQEVAQ 302



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 57/163 (34%), Gaps = 28/163 (17%)

Query: 407 LKFCSFAADARNHIAQELGIINCNC--FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
           L+           + +EL    C    FE  ++ +FP               +P T    
Sbjct: 359 LEVPKDKGYGHGKLVEELWEHQCGDQLFEPTFVRNFP------------VETSPLTRQHR 406

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF-- 522
            +              ++DL   GFE+A+G        +  + F +        ++    
Sbjct: 407 SLP---------GVTEKWDLYVRGFELATGYSELVDPIIQRERFMDQARLASAGDDEAMV 457

Query: 523 --GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                  A + GMPP  G   GIDR++M L G   +RE  LFP
Sbjct: 458 LDEEFLAAMEQGMPPTTGTGMGIDRLLMALTGLG-IRETILFP 499


>gi|254519491|ref|ZP_05131547.1| aspartyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226913240|gb|EEH98441.1| aspartyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 428

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/250 (26%), Positives = 122/250 (48%), Gaps = 14/250 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +   +++ GW++RVR    I FL IRD  G+ Q V   ++       S++ E V+ I G+
Sbjct: 13  IEKEIKIEGWLYRVRRLKSITFLLIRDRSGLVQCVIENNNI---DLSSLKLESVVSIVGI 69

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDLRR 135
           V         +N      E+  +  EI+S A ELP+     E +         R + +R 
Sbjct: 70  VKK-------SNNSLNPFEILVESFEIISEAHELPIELNKKELDVNLDTILNNRAISIRH 122

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + ++     +  I+ S R  +I + F E  TP + A   EG  +        + ++ A  
Sbjct: 123 EKVNSIFKIQNIIVQSFREFLINKGFTEIFTPKIVAEGAEGGTEVFKVEYFEKTAYLA-- 180

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTME 254
           Q+PQ YKQ+++ +GF+R F++A  +R E   + R   E+  +D+E+ F+  + DI+N  E
Sbjct: 181 QSPQFYKQMMVGAGFERVFEVAHVYRAEQHNTSRHLNEYISMDLEIGFINDEFDIMNLEE 240

Query: 255 NVLRGVFEEF 264
           ++++ + +  
Sbjct: 241 DLIKFILKAI 250



 Score = 84.0 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 4/94 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
               +DL+  G EI +GG R +   +++++  N G++ +  E+        F+ GMP HG
Sbjct: 339 GTRSFDLLFKGVEITTGGQRINDYNMLIKSIENKGLNPKDYES----YTDIFRYGMPKHG 394

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G+A G++RI   LL  +NVRE SL P  +     
Sbjct: 395 GLAIGLERITTQLLNLENVREASLIPRDRTRITP 428


>gi|226363746|ref|YP_002781528.1| lysyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226242235|dbj|BAH52583.1| lysyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 503

 Score =  165 bits (418), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/269 (22%), Positives = 108/269 (40%), Gaps = 20/269 (7%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  ++             G  V + G V  VR  G + F  +++  G          
Sbjct: 40  RTHSLAEIRAKYPELEPDTATGDQVGIVGRVIFVRNTGKLCFATLQEGDGTQ---LQAMI 96

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +   + +   + W   +D G  +    E I++    G++ + A   +I S +        
Sbjct: 97  SLAAVGEDALASWKADVDLGDFVFVHGEVISSR--RGELSVMADSWQIASKSLRPLP--V 152

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASS 173
             +E  E  R + R+ DL  R     N  KR  ++  +R  +    F+E  TP+L T + 
Sbjct: 153 AHKEMNEESRVRQRYADLIVRPEARDNARKRVSVVRELRNALERRGFLEVETPMLQTVAG 212

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  G ++ F+I   FR+E   S   P E
Sbjct: 213 GAAARPFITHSNALDIDLY-LRIAPELFLKRCVVGGIEKVFEINRNFRNEGVDSTHSP-E 270

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           F  L+   ++   DD    +  +++ V +
Sbjct: 271 FAMLETYEAYGTYDDSAVMIRELVQEVAQ 299



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 60/163 (36%), Gaps = 28/163 (17%)

Query: 407 LKFCSFAADARNHIAQELGIINCNC--FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
           L+           + +EL    C    FE  ++ DFP               +P T    
Sbjct: 356 LEVPKDKGYGHGKLVEELWEHQCGDQLFEPTFVRDFP------------VETSPLT---- 399

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                + +   +    ++DL   GFE+A+G        +  + F +        ++    
Sbjct: 400 -----RDHRSKAGVTEKWDLYIRGFELATGYSELVDPVIQRERFVDQARLASAGDDEAMA 454

Query: 525 L----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L      A + GMPP  G   GIDR++M L G   +RE  LFP
Sbjct: 455 LDEEFLAAMEQGMPPTTGTGMGIDRLLMALTGLG-IRETILFP 496


>gi|301102291|ref|XP_002900233.1| asparaginyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262102385|gb|EEY60437.1| asparaginyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 495

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 51/286 (17%), Positives = 95/286 (33%), Gaps = 28/286 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVR--PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G+   G  V + GW   +R    G   FL++ D      V    +    E  +       
Sbjct: 31  GLEHEGKTVTVKGWAKTLREAGAGAFAFLELNDGSCFAGVQCVINK---EETEGFADAIA 87

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFGEREYPESIRFKYR 129
               G   S     + +     ++E+ A K+ +   + +    P+  +R   E +R  + 
Sbjct: 88  SGGVGASFSVEGVVVKSPAKGQEVEIKASKVTVYGGIPDSATYPMSKKRHTLEHLRA-HA 146

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-- 187
            L  R +     +  R  +  +         F+   TPI+T S  EGA +    S +   
Sbjct: 147 HLRPRSNIHGAAMRVRNAMAFATHEFFNQRGFLYIHTPIITESDCEGAGEMFSVSTLLSQ 206

Query: 188 ----------------QGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                              F+  P       Q             +   P FR E+  + 
Sbjct: 207 HPDGKLPLTKENKVDYTKDFFDRPSYLSVSGQLNVETHCCALSDVYTFGPTFRAENSNTS 266

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           R   EF+ ++ E++F +  D ++  E+ L+   +   +  T    F
Sbjct: 267 RHLAEFWMIEPEIAFADLKDDIDLAEDYLKFCVQYALDHCTEDLEF 312



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 51/147 (34%), Gaps = 18/147 (12%)

Query: 427 INCNCF--EFCWIMDFPFYEWNEEEKKI---DFAHNPFTMPQGGME----SLKGNDLLSI 477
           +    F  +  W  DF       E ++         P  +     E     ++ ND    
Sbjct: 351 LKKGKFSVKPVWGTDF-----GSEHERYLTETVYKKPVVIYDYPKEFKSFYMRLNDDGKT 405

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            A    LV N  EI  G  R    +V+       G + E  +          + G  PH 
Sbjct: 406 VAAADVLVPNVGEIIGGSAREERLDVLEARIRESGANPEDYK----WYVELRKYGTVPHA 461

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G   G +R++  + G +N+R+V  FP 
Sbjct: 462 GFGLGFERLIRYVTGIENIRDVIPFPR 488


>gi|325108690|ref|YP_004269758.1| Lysyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324968958|gb|ADY59736.1| Lysyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 500

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 116/256 (45%), Gaps = 17/256 (6%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLC 72
           + G  VR++  +   R  G + F D++D  G  Q++    +     +E+  ++    ++ 
Sbjct: 53  EDGPTVRIAARIMTRRKAGKLRFFDVKDATGRIQLLFSRGDLSETQWELMGNLDLGDLIG 112

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           IDG++             +G++ +  Q++ +L  +     P          +  + R +D
Sbjct: 113 IDGVLRRTQ---------SGEVSIFVQELTVLCKSLA-QPPEKFHGAKDIEMLLRQRSID 162

Query: 133 LR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGS 190
           L   D +   +++R++II+S+R  +  +N++E  TP+L A +    AR F+         
Sbjct: 163 LIYNDGVLDRMLQRSKIIDSVRQTLRGQNYVEAETPVLHAVAGGAAARPFITHHNALDIE 222

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  A + + + L+  G ++ +++   FR+E   +   P EF  +++  ++   + ++
Sbjct: 223 LY-LRIALELHLKRLLVGGVEKVYELGRVFRNEGIDATHNP-EFTMIEIYQAYGNYETMM 280

Query: 251 NTMENVLRGVFEEFSN 266
           +  E ++    +   +
Sbjct: 281 DLTEAIVTEAVQSIHD 296



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 84/204 (41%), Gaps = 31/204 (15%)

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG--IINCNCFEFCWIMDFP 441
            +  R        D+   IA    K        R+ +  EL   ++  N     +++D+P
Sbjct: 323 ADLFRDAAGCDMSDTDAVIALADSKGLETKGKHRDVVVNELFELLVEDNLTGPVFVIDYP 382

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
                        +  P T  +    ++         A +++L   G E+A+     +  
Sbjct: 383 ------------ASICPLTKRKQDDPNI---------AERFELYVKGMELANAYTELNDP 421

Query: 502 EVMLQAF--SNVGISKEVVENRFG-GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
           ++  + F     G+S+E    +      +A + GMPP GG+  GIDR+VMLL  ++++R+
Sbjct: 422 KLQEELFLTQLDGLSEEDSMAKMDTDFVKALKVGMPPAGGLGIGIDRLVMLLTNSRSIRD 481

Query: 559 VSLFPMSQNFCDLLMGSPSTVSVE 582
           V  FP+ +       G+P+  + +
Sbjct: 482 VIYFPLLKPE-----GAPAATNDK 500


>gi|307128736|ref|YP_003880766.1| lysyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306483198|gb|ADM90068.1| lysyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 493

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/273 (20%), Positives = 121/273 (44%), Gaps = 9/273 (3%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIA--KSVRSEWVLC 72
           + G  V + G + R+R  G   F++++D +GI Q+    DS   ++I   K +    ++ 
Sbjct: 49  EYGKNVIIYGRILRMRRMGKASFIEMKDKHGIIQIYLKRDSIKNYDIFFKKLLDIGDIIG 108

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G +     ++ N  +   +I+L ++ + +L   ++       +  Y    R++ R+LD
Sbjct: 109 IKGFLFKT--KSNNTTVHAKKIKLLSKCLRVLPHVKQDETGKVHDSFYESEQRYRMRYLD 166

Query: 133 LRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +       +KRT+II  +R  +  + ++E  TPIL +      AR F+         
Sbjct: 167 LIVNDKTKYIFIKRTKIIQYIRNYLNKKGYLEVETPILQSIPGGAIARPFITHHNALNIP 226

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L  + + + + L+  G +  ++ +  FR+E         EF  L++ +S+ +   ++
Sbjct: 227 LY-LRISNELFLKKLIVGGLEYVYEFSRNFRNEGID-KIHNTEFTILELYVSYKDYFWMM 284

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
             +E +L  +  +  N   +      I ++   
Sbjct: 285 IFIEKMLEYLCVKIHNKKFIKIGDNIINFNIPF 317



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 8/110 (7%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +P  M                   +++L+ NG EIA+     +     L+ F        
Sbjct: 384 HPIEMSPLTKIHRS----KKGLTERFELIINGNEIANSYSELNDPIDQLKRFREQIKLYN 439

Query: 517 VVENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             +N          R+ + GMPP  GI  GIDR++MLL   K +++V  F
Sbjct: 440 KGDNEAMLIDWNFIRSLEFGMPPCAGIGIGIDRLIMLLTNKKCIQDVLFF 489


>gi|283778438|ref|YP_003369193.1| lysyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283436891|gb|ADB15333.1| lysyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 528

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/333 (18%), Positives = 118/333 (35%), Gaps = 23/333 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  VR +G +   R  G + F+DI+D  G  Q+                   +    G +
Sbjct: 94  GPKVRAAGRIVLSRDTGKLRFVDIQDWTGRIQLFIGRAQVGENDWAISECFDL----GDL 149

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRD 136
           +    E     +  G++ + A+K+  L+ +   P P   +      +R + R++DL   D
Sbjct: 150 IGVDGELRYTKM--GELTIFAEKLHFLTKSIA-PPPDKHKGLTDPELRHRMRYVDLQTTD 206

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + +  + RT+I+ S+R  +  + F E   P L A +   A                L  
Sbjct: 207 GVLQRFLDRTKIVRSIRSTLTEQGFCEIEGPTLHAIAGGAAARPFTTHHNALNIDLFLRI 266

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A + + + L+  G +R F++   +R+E   S R   EF  L++  ++ +   +++  E++
Sbjct: 267 ALELHLKRLLVGGMERVFELGRVYRNEGL-SPRHNPEFTMLEVYQAYGDYRSMMDLTESI 325

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +                  R      +R +G    D   P       E F        S 
Sbjct: 326 ICNAI--------------RATDGKFVRPWGEKTIDFTPPFARKTYDELFAEHAGVDPSD 371

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
             +V    E       G   +    +   E   
Sbjct: 372 AAAVKALAEKLGFDTAGKHPDVIKSEVFEEKVE 404



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 33/155 (21%)

Query: 421 AQELGIINCNCFE---------FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            +   +I    FE           ++ D+P             +  P T  +     +  
Sbjct: 388 GKHPDVIKSEVFEEKVEDALVGPIFVTDYP------------ASICPLTKRKREKPEV-- 433

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGISKEVVENRFGG-LYRA 528
                  A +++L   G E+A+     +  ++  Q       G+++E    +      RA
Sbjct: 434 -------AERFELFVYGMEVANAYTELNDPDLQDQLFRTQLDGMAEEDSMAKMDHDFIRA 486

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            + GMPP GG+  GIDR+VMLL    ++REV LFP
Sbjct: 487 LKHGMPPAGGLGIGIDRLVMLLTNTASIREVILFP 521


>gi|2501018|sp|Q49158|SYK_MYCFE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1263074|gb|AAC43988.1| lysyl-tRNA synthetase [Mycoplasma fermentans]
          Length = 488

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/325 (20%), Positives = 125/325 (38%), Gaps = 35/325 (10%)

Query: 13  GVSDVGSFVR--LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSE 68
                   V+  +SG +   R      FL ++D  G  QV  N        +I ++    
Sbjct: 50  REELEAKKVKKNISGRLITARGP----FLVLKDRKGTIQVYFNKKENPELTKIVETFDLG 105

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            +L + GL+M            T ++ + AQ I++L+ A + PLP           R+++
Sbjct: 106 DILWVRGLLM---------KTHTCEMTVRAQDIQLLTKALK-PLPDKFHGLTDTEERYRH 155

Query: 129 RFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           R+LDL  +   +N  + RT+I+  +R      +++E  TP L       A         +
Sbjct: 156 RYLDLITNPESRNTFIMRTKIVQWIRDYFNKLDYLEAETPFLHDYLSGAAAKPFTTHHNS 215

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               + L  A +   + L+  GF+R +++   FR+E   +   P EF  ++   ++   +
Sbjct: 216 LNQDFVLRIATEIPLKKLVVGGFERVYEMGRIFRNEGYDTTHNP-EFTTIEFYEAYSNVE 274

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
            ++N  E +++ + ++      V+N                 + DL  P    N+ +   
Sbjct: 275 GMMNRTETLIKELCKKIGKSKFVTN---------------GVEVDLSKPFKRVNMIDEVS 319

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAK 332
               + F KI          A   K
Sbjct: 320 KKTGKNFRKITLEEAIEVAKAYKIK 344



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 56/161 (34%), Gaps = 7/161 (4%)

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
             F     +    +A+   I     F    I++   YE   E   I          +   
Sbjct: 324 KNFRKITLEEAIEVAKAYKIKIEKFFTIGHIINA-LYEELVEPTLIQPTFLYGHPIEISP 382

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS----NVGISKEVVENRF 522
            S K +D       + +L  N  E A+           L+ F           +   +  
Sbjct: 383 LSAKSDDPR--FTERAELFINTKEYANMYTELSDPIDQLERFESQLEEKNKGNDEASDID 440

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                A + GMPP GG   GIDR+VMLL    ++R+V LFP
Sbjct: 441 YDFVDALEYGMPPTGGCGIGIDRLVMLLTETDSIRDVLLFP 481


>gi|187933734|ref|YP_001886695.1| aspartyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187721887|gb|ACD23108.1| aspartate--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 429

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/302 (21%), Positives = 124/302 (41%), Gaps = 27/302 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              V + G++HR+R    I F+ +RD  G+ Q V + +         ++ E V+ I+G V
Sbjct: 14  NKNVVIKGFIHRIRRLKKISFIILRDRTGLMQCVVDNEKL---YIDKIKLESVVSIEGCV 70

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRR 135
                    +       E+  + + I++    +          E     +   R L LR 
Sbjct: 71  KE-------SKNTLSHFEVQVENLIIINEPVEDLPIEINKENLEINLDTKLNNRMLSLRH 123

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +         I N  R  +    F E STP +     EG  +        + ++ A  
Sbjct: 124 EKVSSIFKIENIIANGFRKFLNNNGFTEISTPKIVNEGAEGGSEVFKLKYFEKNAYLA-- 181

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTME 254
           Q+PQ YKQ+++ +GF+R F+I+  +R E+  + R   E+  +D+EM F+E + DI++  E
Sbjct: 182 QSPQFYKQMMVGAGFERVFEISHVYRAEEHNTTRHLNEYVSMDLEMGFIEDEKDIMDLEE 241

Query: 255 NVLRGVFEEF------------SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
            +L+ + ++             +    + N   R+ + +AI     +   +     M   
Sbjct: 242 ELLKFILDKVKIEGKKYLELLNAEIPIIENTIPRMKFSEAIEILKNEYNKVEESDDMDTE 301

Query: 303 TE 304
            E
Sbjct: 302 GE 303



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 15/111 (13%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
            +TMP G  E+             +DL+  G EI +GG R H   ++++     G + + 
Sbjct: 331 MYTMPCGEDET-----------HSFDLLFRGLEITTGGQRIHEYNMLIENMKYKGFNPQN 379

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            E+        F+ GM PHGG+A G++RI   +LG +NVRE SL P  +  
Sbjct: 380 YES----YISNFKYGMMPHGGLAIGLERITCRMLGIENVREGSLIPRDRTR 426


>gi|308501867|ref|XP_003113118.1| CRE-DARS-1 protein [Caenorhabditis remanei]
 gi|308265419|gb|EFP09372.1| CRE-DARS-1 protein [Caenorhabditis remanei]
          Length = 540

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 84/392 (21%), Positives = 144/392 (36%), Gaps = 58/392 (14%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAKSVRSEW 69
           ++ VS+    + + G VH +R  G   F+ +R   Y +   +   D    ++ K V S  
Sbjct: 74  EINVSNATKDIWVRGRVHTIRSKGKNCFIVLRQGVYTVQIAMFMNDKISKQMLKFVSSIS 133

Query: 70  VLCIDGLVMSR-SAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--------- 119
              I  +  +    ET   +     +EL AQ++ ++S +         +           
Sbjct: 134 KESIIDVYATINKVETPIESCTQKDVELLAQQVFVVSASAPKLPLQIEDASRRAPTDEEK 193

Query: 120 ----------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                          R   R LDLR  T H     +  + N  R  + A  FIE   P +
Sbjct: 194 AKEQENQLAVVNLDTRLDNRVLDLRTTTSHAIFRIQAGVCNQFRNILDARGFIEIMAPKI 253

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
            ++  EG  +    S     ++ A  Q+PQ YKQ+ +A  F++ + I P FR ED  + R
Sbjct: 254 ISAPSEGGANVFEVSYFKGSAYLA--QSPQLYKQMAIAGDFEKVYTIGPVFRAEDSNTHR 311

Query: 230 LPGEFYQLDMEMS--------------FVEQDDILNTMENVLRGVFEEFSNG-----NTV 270
              EF  LD+EM+              F   + I   +  + +G+ E++ +      N  
Sbjct: 312 HMTEFVGLDLEMAFNFHYHEKLKFYFIFQVMETIAEVLTQMFKGLQEKYQDEIAAVGNQY 371

Query: 271 SNNFLRICYDDAIRRYGT-------------DKPDLRNPII--MHNVTEHFVHSEFRVFS 315
                + C    I +Y               D+ DL  P+   +  + +    ++F V  
Sbjct: 372 PAEPFQFCEKPLILKYPDAIALLRENGIEIGDEDDLSTPVEKFLGKLVKEKYSTDFYVLD 431

Query: 316 K-ILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           K  L+V P Y +     K    +     R  E
Sbjct: 432 KFPLAVRPFYTMPDFKDKKYSNSYDMFMRGEE 463



 Score =  103 bits (257), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF       +  K ++        YD+   G EI SG  R H ++++++  ++
Sbjct: 432 KFPLAVRPF-YTMPDFKDKKYSN-------SYDMFMRGEEILSGAQRIHDADMLVERATH 483

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             +    +++       AF+ G PPH G   G++R+ ML LG  N+R  SLFP       
Sbjct: 484 HQVDLAKIQS----YIDAFKYGCPPHAGGGIGLERVTMLFLGLHNIRLASLFPRDPKRIT 539

Query: 571 L 571
            
Sbjct: 540 P 540


>gi|322828174|gb|EFZ32092.1| lysyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 580

 Score =  165 bits (417), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 103/256 (40%), Gaps = 17/256 (6%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVA---NPDSACFEIAKSVRSEWVL 71
           V   V ++G +   R  G  + FL ++ D   +  + A     D     +   +R   ++
Sbjct: 105 VEEVVAIAGRIVNKRSSGSKLNFLTLQGDAETVQVISAISDYVDDTFAAVHGRIRRGDII 164

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G         + +   TG+  ++A +I +LS      LP           RF+ R+L
Sbjct: 165 GVKG---------VASLSKTGEFSMNAFEITLLSTCY-HMLPDGWYGLSSIEQRFRQRYL 214

Query: 132 DLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           D   +    +  V R+++I  +R      +F+E  TP+L   +   A    +        
Sbjct: 215 DFIVNRENIQTFVTRSKVIRYIRNFFEDLDFLEVETPVLNQIAGGAAARPFITHHNELNQ 274

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  AP+ Y + L+  G DR +++   FR+E       P EF  ++   ++ + +D +
Sbjct: 275 RMYLRIAPELYLKELVVGGMDRVYELGKQFRNEGIDLTHNP-EFTSVEAYWAYADYNDWM 333

Query: 251 NTMENVLRGVFEEFSN 266
            T E++  G+      
Sbjct: 334 RTTEDLFYGLAMHIHG 349



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 5/111 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L  N  E+ +     +   V  + F     +KE  ++       G  +A +  +
Sbjct: 465 LTERFELFLNKKELCNAYTELNNPIVQREEFMKQLRNKEKGDDEAMDIDEGFVQALEHAL 524

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP-MSQNFCDLLMGSPSTVSVEQ 583
           PP GG   GIDR+VM L    N++EV LFP M       L   P T+   Q
Sbjct: 525 PPTGGWGLGIDRLVMFLTSQANIKEVLLFPAMKPETSSSLTYPPGTLLNGQ 575


>gi|166030609|ref|ZP_02233438.1| hypothetical protein DORFOR_00275 [Dorea formicigenerans ATCC
           27755]
 gi|166029611|gb|EDR48368.1| hypothetical protein DORFOR_00275 [Dorea formicigenerans ATCC
           27755]
          Length = 443

 Score =  165 bits (417), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 68/275 (24%), Positives = 120/275 (43%), Gaps = 15/275 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           + +  T    +L  +     V+++G VH +R  G + F+ +R   G+ Q V    SA F+
Sbjct: 7   VKKKDTLEITELLNAKTSEAVKVNGAVHTIRDMGTVAFVILRKREGLLQCVYEEGSATFD 66

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP---VFGE 117
           + K ++    L ++G++        N     G IE+  +K++ILS  E+  +P      +
Sbjct: 67  L-KEIKEASTLEVEGVLE------QNEKAPNG-IEIRMKKVKILSQPEDEMMPLAISKWK 118

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                  +  YR + LR          +  +  + R  + ++ F E  TP + A S EG 
Sbjct: 119 LNTSLEAKLNYRSISLRNIRERAKFRIQEGLTRAFRDFLYSQEFTEIHTPKIGAKSAEGG 178

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +       ++ +   L Q+PQ YKQ +M   FDR F+ AP FR E   + R   E+  L
Sbjct: 179 ANLFKLEYFHRPA--VLQQSPQFYKQ-MMVGVFDRVFETAPVFRAEKHNTKRHLNEYTSL 235

Query: 238 DMEMSFVE-QDDILNTMENVLRGVFEEFSNGNTVS 271
           D E+ +++  +DI+      L+   E         
Sbjct: 236 DFEIGYIDGFEDIMGMETGFLQYAMELLKKDYARE 270



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 26/149 (17%)

Query: 425 GIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           G      +  +F ++  +P                PF             D     +  +
Sbjct: 319 GKYAKEEWGSDFVFVTHYP------------SKKRPFYAMDD------PEDPKYTLS--F 358

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL+  G EI +GG R H  + +L+     G++ E ++         F+ GMPPHGG+  G
Sbjct: 359 DLLFRGLEITTGGQRIHDYQTLLKKIEVRGMTTEGMDQ----YLATFKHGMPPHGGLGIG 414

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           ++R+ M LLG  NVRE +LFP   +  + 
Sbjct: 415 LERLTMQLLGEDNVRETTLFPRDLSRLEP 443


>gi|111021392|ref|YP_704364.1| lysyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|110820922|gb|ABG96206.1| lysine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 503

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 18/268 (6%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  ++             G  V + G V  VR  G + F  +++  G         +
Sbjct: 40  RTHSLAEIRAKYPELEPDTATGDQVGVVGRVIFVRNTGKLCFATLQEGDGTQLQAMISLA 99

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           A  E A ++    V    G  +    E I++    G++ + A   +I S +         
Sbjct: 100 AVGEDALALWKADVDL--GDFVFVHGEVISSR--RGELSVMADSWQIASKSLRPLP--VA 153

Query: 117 EREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSP 174
            +E  E  R + R+ DL   +  + N  KR  ++  +R  +    F+E  TP+L T +  
Sbjct: 154 HKEMNEESRVRQRYADLIVRSEARENARKRVAVVRELRNALELRGFLEVETPMLQTVAGG 213

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+  S       Y L  AP+ + +  +  G ++ F+I   FR+E   S   P EF
Sbjct: 214 AAARPFITHSNALDIDLY-LRIAPELFLKRCVVGGIEKVFEINRNFRNEGVDSTHSP-EF 271

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFE 262
             L+   ++   DD    +  +++ V +
Sbjct: 272 AMLETYEAYGTYDDSAVMIRELVQEVAQ 299



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 60/163 (36%), Gaps = 28/163 (17%)

Query: 407 LKFCSFAADARNHIAQELGIINCNC--FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
           L+           + +EL    C    FE  ++ DFP               +P T    
Sbjct: 356 LEVPKDKGYGHGKLVEELWEHQCGDQLFEPTFVRDFP------------VETSPLT---- 399

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                + +   +    ++DL   GFE+A+G        +  + F +        ++    
Sbjct: 400 -----RDHRSKAGVTEKWDLYIRGFELATGYSELVDPVIQRERFVDQARLASAGDDEAMA 454

Query: 525 L----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           L      A + GMPP  G   GIDR++M L G   +RE  LFP
Sbjct: 455 LDEEFLAAMEQGMPPTTGTGMGIDRLLMALTGLG-IRETILFP 496


>gi|260578417|ref|ZP_05846331.1| lysine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603439|gb|EEW16702.1| lysine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 535

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 71/333 (21%), Positives = 136/333 (40%), Gaps = 16/333 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMS 79
           V ++G +  +R  G + F  ++D  G          +  E+ +   + W   +D G  + 
Sbjct: 83  VSVTGRLIFMRNTGKLCFATLQDGDGTQ---LQAMLSLAEVGEDALAAWKADVDLGDFIG 139

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTL 138
            +   I +    G++ + A +  + + A       F   E  E  R + R+ DL  R+  
Sbjct: 140 VTGRVIASR--RGELSVMASEWVMAAKALRPLPVAFA--EMNEETRVRQRYNDLIVREEA 195

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQA 197
            KN + R ++I ++R  M  E F+E  TP+L        AR F+  S       Y L  A
Sbjct: 196 RKNAMTRVKVIRALRDYMEGEGFVEIETPMLQTLHGGAAARPFVTHSNALDIDLY-LRIA 254

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ + +  +  G DR F+I   FR+E       P EF  L+   ++ + DD   T    +
Sbjct: 255 PELFLKRAVVGGIDRVFEINRNFRNEGVDKSHSP-EFAMLETYAAWGDYDDCARTTRESI 313

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN--VTEHFVHSEFRVFS 315
           + + ++ + G  +         D     +G +  ++     ++     ++    E  + S
Sbjct: 314 QYIVDQLTKGTDLEGTGKVRLADGTEFDFGGEWKEIEMYPSLNEALARKYPGQPEVTIDS 373

Query: 316 KILSVNPGYEVWA--IPAKGGGGNRAFCDRMNE 346
            +  +    +V    +PAKGG G+    + + E
Sbjct: 374 TVEELQKIAKVIGLDVPAKGGWGHGKLVEEIWE 406



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 ++DL   GFE+A+G        +  + F +        ++           A +
Sbjct: 436 KPGVTEKWDLYVRGFELATGYSELVDPVIQRERFEDQARLAANGDDEAMRLDEDFLAAME 495

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP  G   GIDR++M L G   +RE  LFP
Sbjct: 496 QGMPPTAGTGMGIDRLLMALTGLG-IRETVLFP 527


>gi|146093564|ref|XP_001466893.1| aspartyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134071257|emb|CAM69942.1| putative aspartyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|322500992|emb|CBZ36069.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 550

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 65/283 (22%), Positives = 113/283 (39%), Gaps = 20/283 (7%)

Query: 2   HRYRTHS-CGDLG-VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPD 55
           ++ RTH     L     V   V +   V   R  G + F+ +RD       +  V  N  
Sbjct: 60  YKSRTHIPVAKLSQPELVSKTVLIRARVSTTRKKGKMAFMVLRDGSDSVQAMAAVEGNVP 119

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE---ELPL 112
               +    + +E ++ ++  V     E    +     IEL  +KI  ++ +       L
Sbjct: 120 KEMIDFMGQIATESIVDVEATVCKV--EQPITSTSHSDIELKVKKIHTVTESLRTLPFTL 177

Query: 113 PVFGEREYPE------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                +E  E        R   R++DLR          ++R+    R  +I  +F E  +
Sbjct: 178 EDASRKESDEGAKVNLDTRLNSRWMDLRTPASGAIFRLQSRVCQYFRQFLIDNDFCEIHS 237

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P +  +  EG  +       N+  F  L Q+PQ YKQ+++     R F++ P FR E+  
Sbjct: 238 PKIINAPSEGGANVFKLEYFNR--FAYLAQSPQLYKQMVLQGDVPRVFEVGPVFRSENSN 295

Query: 227 SDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGN 268
           + R   EF  LD+EM   E   ++L+  E++   +FE  +   
Sbjct: 296 THRHLTEFVGLDVEMRIDEHYYEVLDVAESLFNYIFEHLATHT 338



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   +  PF   +   +    N         YD+   G EI+SG  R H  +++L     
Sbjct: 442 RFPSSVRPFYTMECKDDVRFTN--------SYDMFIRGEEISSGAQRIHDPDLLLARAKM 493

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           + +    ++        +F+ G  PHGG   G++R+VML LG  NVR  SLFP       
Sbjct: 494 LNVDLTPIKE----YVDSFRLGAWPHGGFGVGLERVVMLYLGLSNVRLASLFPRDPQRTT 549

Query: 571 L 571
            
Sbjct: 550 P 550


>gi|308811402|ref|XP_003083009.1| lysyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116054887|emb|CAL56964.1| lysyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 593

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 98/260 (37%), Gaps = 12/260 (4%)

Query: 17  VGSFVRLSGWVHRVRPHGG-IIFLDIR-DHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
                 ++G +   R  G  + F D+  D   I        +  ++ AK   +     I 
Sbjct: 129 ADETCSIAGRIMSKRASGKKLYFYDLVADGKKIQITADEAGATGYDFAKVHAATRRGDIV 188

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G+V              G++ +   +  IL+    +     G R+     RF+ RFLDL 
Sbjct: 189 GVV------GKPGKTKRGELSIFPVEFSILTPCLHMLPGFSGLRDV--ETRFRKRFLDLI 240

Query: 135 -RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
             + +      R+ II  +R  +   +F+E  TP++   +        V    +      
Sbjct: 241 MNNEVRDTFYIRSNIIRYVRKYLDDRDFLEVETPMMNMIAGGATARPFVTHHNDLNMTLF 300

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  AP+ Y + L+  G +R ++I   FR+E       P EF   +   ++ + +D++   
Sbjct: 301 MRIAPELYLKQLVVGGIERVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADYNDLMTMT 359

Query: 254 ENVLRGVFEEFSNGNTVSNN 273
           E ++ G+         +  +
Sbjct: 360 EEMISGMVYAIKGSYKIQYH 379



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 8/104 (7%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++L  N  E+ +     +      + F     +KE  ++           + + G+P
Sbjct: 487 TERFELFVNTKELCNAYTELNDPIDQRERFEEQAAAKESGDDEAMLIDETFVESLEIGLP 546

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
           P GG   G+DR+ MLL    N++EV LFP  +        +PS 
Sbjct: 547 PTGGWGLGVDRLTMLLADKNNIKEVLLFPAMKPDE----QAPSE 586


>gi|303323143|ref|XP_003071563.1| aspartyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240111265|gb|EER29418.1| aspartyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 937

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 76/368 (20%), Positives = 135/368 (36%), Gaps = 44/368 (11%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH-----YGITQVVANPDSACFEIAKSV 65
           +     G  +     +H VR  G  ++FL  R         +T+          + A+ +
Sbjct: 122 ITPDMAGQEITFRARLHVVRRMGQKLVFLVFRQQVITLQGVLTEKKGEISILMIQWAEHI 181

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------ 119
           R   +L + G++       I   +    +E+  Q+I ++   EE       E E      
Sbjct: 182 RVGSILKVKGVIRKPEVPVIGTTMH--DLEVHIQEIHVIVRREEPIPFSVYEAELPAVEE 239

Query: 120 ---------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                     P+  R   R LDLR DT       ++ I +  R  + +  FIE  TP L 
Sbjct: 240 EKIEGRRTRVPDRTRLSNRILDLRTDTSQSIFRIQSVISSYFRSTLDSMGFIEIHTPKLQ 299

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            ++ E           N+ +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R 
Sbjct: 300 GAATESGASVFSVRYFNRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRH 357

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVS----------------NN 273
             E+  LD+EM+  E   + L  ++ V++ +FE     +                   + 
Sbjct: 358 LTEYTGLDIEMAIEEHYHESLEVIDQVIKKIFEVIYGKHRREVQIVKHQFPSEDLVWLDK 417

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
              I + + IR          +   + ++ +     E R+    L     +  + I  K 
Sbjct: 418 TPIITFSEGIRMLNESGWRTEDGKELSDLEDISTRDEIRL--GELVKEKYHTDYYIMDKF 475

Query: 334 GGGNRAFC 341
               R F 
Sbjct: 476 PASARPFY 483



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 30/162 (18%)

Query: 417 RNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           R+ I   LG ++        +IMD           K   +  PF       ++   N   
Sbjct: 452 RDEI--RLGELVKEKYHTDYYIMD-----------KFPASARPFYAMPDPNDNRFTN--- 495

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
                 YD+   G EI SGG R H   ++ +    +G+    +E         FQ G+PP
Sbjct: 496 -----AYDIFVRGQEIVSGGQRIHNPIMLEERMRQMGVDPASMEE----YMEGFQWGVPP 546

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLF---PMSQNFCD-LLM 573
           H G   G++R++ML+L   N+R  S+F   P S    D  ++
Sbjct: 547 HAGAGIGLERMLMLILKLGNIRLASMFHRDPKSFPAQDQPMV 588


>gi|320526935|ref|ZP_08028124.1| asparaginyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132520|gb|EFW25061.1| asparaginyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 462

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 13/262 (4%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           F++L GWV   R    + F+ + D            S                + G  +S
Sbjct: 27  FIQLQGWVRTNRAGKNVSFIALNDGTFFKNAQIVYSSDTLSNYAEAAKY----LTGTAIS 82

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
              + I     +   E+ A +I +    +    P+  +R   E +R +   L  R +T  
Sbjct: 83  VVGKFILTPEASQPFEIQATEINLEGECDSTY-PLQKKRHTFEYLR-EIGHLRPRTNTFS 140

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----SFYALP 195
                R+ +  ++      + F+   TPI+T +  EGA +    +    G     F+   
Sbjct: 141 AVFRVRSVLAMAIHQFFQDQGFVYVHTPIITGADAEGAGETFTVTTREDGNYEEDFFGKH 200

Query: 196 QA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            +     Q +    A  F   +   P FR E+  +     EF+ ++ EM+F + D  ++ 
Sbjct: 201 ASLTVSGQLQAEAYAMAFRDIYTFGPTFRAENSNTTTHAAEFWMIEPEMAFADLDYSMDV 260

Query: 253 MENVLRGVFEEFSNGNTVSNNF 274
           +E++L+               F
Sbjct: 261 IEDMLKYCINYVMEMCPEELAF 282



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 24/153 (15%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFY--EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
            H   +L       +    ++  P +  ++ EE K        F M +        ND  
Sbjct: 327 IHWGMDLN-TEHERYITEKVVKGPTFLIDYPEEIK-------AFYMRR--------NDDG 370

Query: 476 SIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
              A   DL+  G  E+  G  R    +++ +   ++G++       +       + G  
Sbjct: 371 KTVA-ACDLLVPGVGELVGGSQREERLDILEKKMESLGMNV----EGYQWYLDLRRYGGC 425

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            H G   G +R+VM + G +N+R+V  F  +  
Sbjct: 426 QHAGFGLGFERLVMYITGMENIRDVVPFARTPR 458


>gi|328850413|gb|EGF99578.1| hypothetical protein MELLADRAFT_40205 [Melampsora larici-populina
           98AG31]
          Length = 533

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 78/334 (23%), Positives = 138/334 (41%), Gaps = 39/334 (11%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQ--VVANPDSACFEIAK---S 64
            +  + VG  VRL   VH  R     + FL +R      Q  + A PD+   ++ K    
Sbjct: 75  QIDATMVGQRVRLQARVHNSRSQSAKLCFLVLRQQISTIQAILSATPDTISKQMVKFTTG 134

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--------EELPLPVFG 116
           +  E ++ ++G++          +I   +I+L   K+ +++ A        E+    V  
Sbjct: 135 ISLESIVIVEGVIQKPIEGVKGCSISNAEIKL--DKVYLVAEAPIKLPFSLEDASRSVDA 192

Query: 117 ERE----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
           E E         R   R LDLR    +     ++R+ N  R  +  + F+E  TP +  +
Sbjct: 193 EGEQFVTVGSDTRLDNRVLDLRTPVNNAIFKVQSRVCNLFRAYLDGQGFMEIHTPKIQGA 252

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + E           +Q +F A  Q+PQ  KQ+ +A+ FDR ++IAP FR E+  + R   
Sbjct: 253 ATESGASVFKLQYFDQPAFLA--QSPQLAKQMAIAADFDRVYEIAPVFRAENSNTYRHMT 310

Query: 233 EFYQLDMEMSFVEQ-DDILNTMENVLRGVFE----------EFSNGNTVSNNF------L 275
           EF  LD+EMS  E   + ++ ++ +   +F+          E        +NF      L
Sbjct: 311 EFTGLDLEMSLQEHYHEAVDLLDAMFLHIFKGLQSHCSKEIEVIKSQHPVDNFKFLDETL 370

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
           R+ + +AI+    +   +     M    E  +  
Sbjct: 371 RLKHHEAIQILKDNGHAIEFGEDMGTEQERELGK 404



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/218 (23%), Positives = 80/218 (36%), Gaps = 43/218 (19%)

Query: 364 DESGNVAGMGPVA--KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
            E   +    PV   K L+        +RL   +        G  ++F            
Sbjct: 349 KEIEVIKSQHPVDNFKFLDE------TLRLKHHEAIQILKDNGHAIEFGEDMG---TEQE 399

Query: 422 QELG-IINCN-CFEFC-----WIMD-FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           +ELG +I     +        +I+D FP             +  PF      ++    N 
Sbjct: 400 RELGKLIKAKVTYHHLSPADYYIIDKFPL------------SIRPFYTMPDAVDPTLSN- 446

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                   YD    G EI SG  R H    +++   NVGI+ + ++    G    F+ G 
Sbjct: 447 -------SYDFFMRGEEIISGAQRIHEPNFLIERMKNVGINPDDMK----GYVDGFKLGC 495

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PPH G   G++R+VML  G  N+R+ S+FP      + 
Sbjct: 496 PPHAGGGVGLERVVMLFCGLGNIRKASMFPRDPRRLEP 533


>gi|298706663|emb|CBJ29592.1| Aspartyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 631

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 61/290 (21%), Positives = 115/290 (39%), Gaps = 33/290 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDH--YGITQVVANPDSACFE------IAKSVRSE 68
           VG  V + G VH+VR  GG  FL +R      +  V         +         ++  E
Sbjct: 179 VGREVWIRGRVHQVRGKGGSAFLVVRQDTASTVQAVHFKDKENPEDSRRMIKFVGTLPLE 238

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES----- 123
            ++ + GL++  + ++   N     +E+    +  +S A         +    E      
Sbjct: 239 SIVDVKGLLVEANVKSCTQN----NVEIKIDSVYAVSRASLFLPFSVEDAARSEEEVEAS 294

Query: 124 -------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                        +R   R+LDLR    +  +  ++ +    R  + A+ F+E  TP + 
Sbjct: 295 QETGRPFPRLGQDLRLDNRWLDLRTPANNAIMRLQSGVCQLFRESLYAQGFMEIHTPKII 354

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
               EG           + +   L Q+PQ YKQ+ +++   R F++ P FR E+  + R 
Sbjct: 355 PGESEGGAGVFTTDYFGKQA--CLAQSPQLYKQMAISADMGRVFEVGPVFRAENSNTRRH 412

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
             EF  LD+EMS  +  ++++  + N  + +F           + +R+ Y
Sbjct: 413 LTEFNGLDLEMSITDHYNEVIQVLHNTFKSIFSGLEERYKDQLDAVRMQY 462



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +      PF       +           +  YDL+  G EI SG  R H +++++Q    
Sbjct: 523 RFPTQIRPFYTMPCPDD--------KRYSNSYDLILRGQEICSGAQRCHDADMLMQILEE 574

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+              AF+ G PPHGG   G++RIV L LG  N+R+ S+FP   + C 
Sbjct: 575 KGVPA----EPLSDYINAFRHGCPPHGGGGVGLERIVFLYLGLDNIRKASMFPRDPSRCS 630

Query: 571 L 571
            
Sbjct: 631 P 631


>gi|225562887|gb|EEH11166.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 971

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 71/366 (19%), Positives = 139/366 (37%), Gaps = 28/366 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH-YGITQVVANP----DSACFEIAKSV 65
           +    +G  V     VH +R     ++F+  R     +  V+A       +   +  + +
Sbjct: 156 ITPHSIGQEVTFRARVHHIRNMSSKLVFVIFRQQVTTMQGVLAEKPGVISTLMVQWVERI 215

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--------VFGE 117
           R   ++ + G++ S         I    +EL  Q++ ++   E+                
Sbjct: 216 RVGSIVKVRGVLSSSKVPVTGCTIH--DVELDIQELHVVVHREDPIPFSVYEAELLNKDA 273

Query: 118 REYP-------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           +          +  R   R LDLR DT       ++ I N  R  + A+ FIE  TP L 
Sbjct: 274 KNTDGRRNHVLDRTRLSNRILDLRTDTSQSIFRIQSAISNLFRAALDAQGFIEIHTPKLQ 333

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           +S+ E            + +F A  Q+PQ  KQ+ +A+ F+R ++I   FR E+  + R 
Sbjct: 334 SSATESGASVFEVKYFTREAFLA--QSPQLAKQMAIAADFERVYEIGAVFRAENSNTHRH 391

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             E+  LD+EM+  E   + L T+++VL+ +F+          + ++  +      +  +
Sbjct: 392 LTEYTGLDIEMAIEEHYHEALETIDSVLKEIFKGIYGRYRREVDIIKGQFPHEDLIWLDE 451

Query: 290 KP--DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
            P       I + N +      E    ++ L       +  +  +    +    D+  + 
Sbjct: 452 TPIIPFAEGIKLLNDSGWRQDGEELSVNEDLGTRDEIRLGELIKEKYHTDYYILDKFPKS 511

Query: 348 ARSQGQ 353
           AR    
Sbjct: 512 ARPFYA 517



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 76/211 (36%), Gaps = 28/211 (13%)

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD-GDSCFFIAGDPLKFCSFAADARNHIAQ 422
            E   + G  P    + +  T  I     ++   DS +   G+ L         R+ I  
Sbjct: 432 REVDIIKGQFPHEDLIWLDETPIIPFAEGIKLLNDSGWRQDGEELSVNEDLG-TRDEI-- 488

Query: 423 ELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            LG +I        +I+D           K   +  PF   +                  
Sbjct: 489 RLGELIKEKYHTDYYILD-----------KFPKSARPFYAMED--------PENPNFTNS 529

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           +D+   G EI SGG R H  +++ Q     GI+   +E         F+ G PPH G   
Sbjct: 530 FDIFVRGQEIVSGGQRIHDEKILEQRMKEAGINPLAMEE----YLEGFRWGAPPHAGAGI 585

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
           G++R++ML+L   N+R  SLF         +
Sbjct: 586 GLERLLMLILKLGNIRLASLFHRDPKSFQDM 616


>gi|47458879|ref|YP_015741.1| lysyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|81614457|sp|Q6KIP6|SYK_MYCMO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|47458207|gb|AAT27530.1| lysyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 487

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 62/327 (18%), Positives = 132/327 (40%), Gaps = 32/327 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSA 57
           + +Y + S  +L   +        G +  +R      FL ++      Q+       D  
Sbjct: 41  IQKYNSFSKDELAKDEFSLSTT--GRIITIRSS----FLVLKSQGSKFQIYLPIKELDKK 94

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+   +    ++ ++G +M            TG++ L A ++++LS + +  LP    
Sbjct: 95  YLELIDLLDIGDIIFVNGKLM---------KTQTGELTLRANELKLLSKSLK-VLPDKFH 144

Query: 118 REYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPE 175
                  R+++R++DL  +  + K  + R+RII+ +R       ++E  TP+L       
Sbjct: 145 GLNDIEERYRHRYVDLIVNDDVRKTFLLRSRIISLIRKYFDNLEYLEVDTPVLQPILGGA 204

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            A+ F+        +FY L  A +   + L+  GFDR ++I   FR+E   +   P EF 
Sbjct: 205 SAKPFITKFNALNSNFY-LRIATELPLKKLVVGGFDRVYEIGRIFRNEGVDTTHNP-EFT 262

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV--------SNNFLRICYDDAIR-RY 286
            ++   ++   + ++N  E++ + + +E +             +  F R+   +A+  + 
Sbjct: 263 SIEYYEAYSNNEGMMNRTEDLFKFIAKELNLKTIFFNGYEIDLNKPFRRLNMVEALNEKL 322

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           G D   +          +H +  E   
Sbjct: 323 GIDLYKISFEDAKVLAKKHHIKVESYF 349



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 61/154 (39%), Gaps = 10/154 (6%)

Query: 420 IAQELGIINCNCFEFCWIMD--FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           +A++  I   + F+   I++  F  +   +  +      +P  +     ++ K  +    
Sbjct: 337 LAKKHHIKVESYFKIGHIINELFELFIEKDLIQPTFVYGHPIEISPLANKNKKNPN---- 392

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGM 533
              + +L     E A+           L+ F +    K+               A + G+
Sbjct: 393 FTDRAELFIGTKEYANMFTELTDPIDQLERFKDQQNEKDNGNEEANEIDYDFVEALEYGL 452

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PP GG   GIDR+VML    +++REV LFP  +N
Sbjct: 453 PPTGGCGIGIDRLVMLFTNNESIREVLLFPHLKN 486


>gi|167761368|ref|ZP_02433495.1| hypothetical protein CLOSCI_03776 [Clostridium scindens ATCC 35704]
 gi|167661034|gb|EDS05164.1| hypothetical protein CLOSCI_03776 [Clostridium scindens ATCC 35704]
          Length = 444

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 67/297 (22%), Positives = 125/297 (42%), Gaps = 16/297 (5%)

Query: 6   THSCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           T    +L   +  G  V+++G VH +R  G + F+ +R   G+ Q V    +A F++ K 
Sbjct: 12  TLEISELRKQAQPGQTVKVNGAVHAIRNMGTVAFVILRKREGLLQGVYEEGTAKFDL-KD 70

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP---VFGEREYP 121
           ++    + ++G++              G IE+  + ++ILS  ++  +P      +    
Sbjct: 71  IKEAATIEVEGVLEENEK-------APGGIEIRMENLKILSQPQDEMMPLAISKWKLNTS 123

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              +  YR + LR          +  +  + R  + ++ F E  TP + A   EG  +  
Sbjct: 124 LEAKLNYRSISLRNIRERAKFRIQEGLTRAFRDFLYSQGFTEIHTPKIGAKGAEGGANIF 183

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                ++ +  A  Q+PQ YKQ +M   FDR F+ AP FR E   + R   E+  LD EM
Sbjct: 184 KLEYFHRPAVLA--QSPQFYKQ-MMVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEM 240

Query: 242 SFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
            +++  +DI+      L+   E            L I   +  +    +  D++  +
Sbjct: 241 GYIDGFEDIMAMETGYLQYAMELLKKDYAQELKILGITLPEVEKIPAVEFSDIKEKV 297



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF             D     +  +DL+  G EI 
Sbjct: 330 DFVFVTHYP------------SKKRPFYAMDD------PKDPRYTLS--FDLLFRGMEIT 369

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H  E++++     G+S+E +E         F+ GMPPHGGI  G++R+ M L+G
Sbjct: 370 TGGQRIHDYEMLVEKIKARGMSQEGMEQ----YLDTFKHGMPPHGGIGIGLERLTMKLIG 425

Query: 553 AKNVREVSLFPMSQNFCDL 571
             NVRE +LFP   +  + 
Sbjct: 426 EDNVRETTLFPRDLSRLEP 444


>gi|227499836|ref|ZP_03929929.1| asparagine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227217945|gb|EEI83218.1| asparagine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 470

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 126/353 (35%), Gaps = 51/353 (14%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
           V + V++ GW+   R    + F+++ D       Q+V   D + +           L + 
Sbjct: 22  VDTEVKVYGWIRNQRFGKNVGFIELNDGTCFKNLQIVVGSDISNYNELDKQFLSTSLEVR 81

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V+ ++  + N        E+ A++I++L  + +   P+  +R+  E +R     L  R
Sbjct: 82  G-VLVKTGNSKNP------YEIQAKEIKVLGESSD-KYPIQKQRQTLEYMR-TIPHLRAR 132

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +T       R+ +  ++        F+  + PI+T+S  EGA +    + ++       
Sbjct: 133 TNTYRAVFRVRSILAYALHNFFQQRGFVYINPPIVTSSDAEGAGEMFNITTIDPNNPPRK 192

Query: 190 ---------SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F++         Q +    A  F   +   P FR E+  + R   EF+ L
Sbjct: 193 EDGSVDFSKDFFSKKSYLTVSGQLEAEDYALAFGDVYTFGPTFRAEESNTPRHAAEFWML 252

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------------------NFLR 276
           + EM+F + +  ++  E++++   +                                F R
Sbjct: 253 EPEMAFTDYNLAMDVAEDMIKYAIDYLLKNAPDEMEFFNKWIDEGLIERLKRVRDAEFKR 312

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
           + Y +AI            P+   +   TEH  +    +    + V    +  
Sbjct: 313 LTYTEAIELLQKSGEKFEYPVEWGIDLQTEHERYLSEVIVKGPVFVTDYPKNI 365



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 26/136 (19%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             ++ D+P        K I      F M +        ND     A  +D++  G  E+ 
Sbjct: 355 PVFVTDYP--------KNIKA----FYMKR--------NDDGKTVA-AFDMLVPGVGELI 393

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + + ++    G+  E  +          + G   H G   G +R VM + G
Sbjct: 394 GGSQREERYDELYKSMEENGLKPEEYQ----NYLDLRRFGTVVHSGFGLGFERAVMYVTG 449

Query: 553 AKNVREVSLFPMSQNF 568
            KN+R+V  +P   + 
Sbjct: 450 MKNIRDVLAYPRYVHA 465


>gi|307202947|gb|EFN82167.1| Asparaginyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 516

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 65/340 (19%), Positives = 119/340 (35%), Gaps = 22/340 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
              V+L GW+HR+R  G  + F+ +RD  G  Q V          A  + +E  + + G 
Sbjct: 93  DKRVKLYGWIHRLRRQGKALMFITLRDGTGFLQCVLTDKLCQTYDALILATEAAVQLFGT 152

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  EL     +++  +           E    ++   R + +R +
Sbjct: 153 LKIVPEG----KSAPGGHELCVDYWKLIGSSPPGGADSILNEEALPDVQLDNRHIMIRGE 208

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
              + ++ R+ +  + R       + E + P L  +  EG           + +F  L Q
Sbjct: 209 NTSRILIMRSILTQAFRDHYKDRGYYEVTPPTLVQTQVEGGSTLFKLDYFGENAF--LTQ 266

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       + IA  +R E  R+ R   EF  ++ E  F+  DD+L+ +E++
Sbjct: 267 SSQLYLETCIP-AMGDVYCIAQSYRAEQSRTRRHLAEFTHIEAECPFITFDDLLDRLEDL 325

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V E                N       F R+ Y DAI  Y  +    +     +   
Sbjct: 326 ICNVVERVLQSPLGSLVKELNPNFQVPKKPFKRMNYSDAIE-YLRENNITKEDGSFYEFG 384

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
           E       R  +  ++       +    K     R   DR
Sbjct: 385 EDIPEMPERKMTDAINEPIMLCRFPAEIKSFYMQRCTEDR 424



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R    + M++ ++   I        +       + G  PHGG   G+
Sbjct: 433 LLPNVGEIVGGSMRIWNYDEMMEGYNRENIDPTP----YYWYTDQRKYGSCPHGGYGLGL 488

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  LL   ++REV L+P 
Sbjct: 489 ERFLCWLLNRYHIREVCLYPR 509


>gi|119189367|ref|XP_001245290.1| hypothetical protein CIMG_04731 [Coccidioides immitis RS]
          Length = 937

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 76/368 (20%), Positives = 135/368 (36%), Gaps = 44/368 (11%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH-----YGITQVVANPDSACFEIAKSV 65
           +     G  +     +H VR  G  ++FL  R         +T+          + A+ +
Sbjct: 122 ITPDMAGQEITFRARLHVVRRMGQKLVFLVFRQQVITLQGVLTEKKGEISILMIQWAEHI 181

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------ 119
           R   +L + G++       I   +    +E+  Q+I ++   EE       E E      
Sbjct: 182 RVGSILKVKGVIRKPEVPVIGTTMH--DLEVHIQEIHVIVRREEPIPFSVYEAELPAVEE 239

Query: 120 ---------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                     P+  R   R LDLR DT       ++ I +  R  + +  FIE  TP L 
Sbjct: 240 EKIEGRRTRVPDRTRLSNRILDLRTDTSQSIFRIQSVISSYFRSTLDSMGFIEIHTPKLQ 299

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            ++ E           N+ +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R 
Sbjct: 300 GAATESGASVFSVRYFNRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRH 357

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVS----------------NN 273
             E+  LD+EM+  E   + L  ++ V++ +FE     +                   + 
Sbjct: 358 LTEYTGLDIEMAIEEHYHESLEVIDQVIKKIFEVIYGKHRREVQLIKHQFPSEDLVWLDK 417

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
              I + + IR          +   + ++ +     E R+    L     +  + I  K 
Sbjct: 418 TPIITFSEGIRMLNESGWRTEDGKELSDLEDISTRDEIRL--GELVKEKYHTDYYIMDKF 475

Query: 334 GGGNRAFC 341
               R F 
Sbjct: 476 PASARPFY 483



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 30/162 (18%)

Query: 417 RNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           R+ I   LG ++        +IMD           K   +  PF       ++   N   
Sbjct: 452 RDEI--RLGELVKEKYHTDYYIMD-----------KFPASARPFYAMPDPNDNRFTN--- 495

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
                 YD+   G EI SGG R H   ++ +    +G+    +E         FQ G+PP
Sbjct: 496 -----AYDIFVRGQEIVSGGQRIHNPIMLEERMRQMGVDPASMEE----YMEGFQWGVPP 546

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLF---PMSQNFCD-LLM 573
           H G   G++R++ML+L   N+R  S+F   P S    D  ++
Sbjct: 547 HAGAGIGLERMLMLILKLGNIRLASMFHRDPKSFPAQDQPMV 588


>gi|58382414|ref|XP_311928.2| AGAP002969-PA [Anopheles gambiae str. PEST]
 gi|55241789|gb|EAA07595.2| AGAP002969-PA [Anopheles gambiae str. PEST]
          Length = 557

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 65/294 (22%), Positives = 112/294 (38%), Gaps = 26/294 (8%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKS 64
           TH     G  + G  VR+ GWVHR+R  G  ++F+ +RD  G  Q V          A  
Sbjct: 127 TH-----GADNRGVRVRIYGWVHRLRRQGKGLMFITLRDGTGFLQCVLTDTLCQTYNALV 181

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           + +E  + + G +    A         G  EL A   E++ +A           E    +
Sbjct: 182 LSTESSVQLFGTLKEVPAG----KTAPGGHELHADYWELIGLAPAGGADAILNEEAHPDV 237

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           +   R + +R +   K +  R  ++ + R       + E + P L  +  EG        
Sbjct: 238 QLDNRHIMIRGENTSKILKMRDVVMQAFRSHYFDRGYTEVTPPTLVQTQVEGGATLFKLD 297

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              + +F  L Q+ Q Y +  +       F +A  +R E  R+ R   E+  ++ E  F+
Sbjct: 298 YFGEEAF--LTQSSQLYLETCIP-ALGDVFCVAQSYRAEQSRTRRHLAEYSHIEGECPFI 354

Query: 245 EQ--------DDILNTMENVLR----GVFEEFS-NGNTVSNNFLRICYDDAIRR 285
                     D I + ++ VL+     + +E +         F R+ Y DAI  
Sbjct: 355 TFDDLLDRLEDLICDVVDRVLKSPWGYMVQELNPGFVAPKRPFRRMNYADAIVW 408



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R+   + +L  +  
Sbjct: 448 RFPAEIKSFYMAKCEDDPRLTESVDV-------LLPNVGEIVGGSMRSWKYDELLDGYKR 500

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI  +     +         G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 501 EGIDPKP----YYWYVDQRVYGTEPHGGYGLGLERFLCWLLNRYHIREVCLYPR 550


>gi|319787278|ref|YP_004146753.1| asparaginyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465790|gb|ADV27522.1| asparaginyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 466

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 63/385 (16%), Positives = 118/385 (30%), Gaps = 50/385 (12%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
            G  V + GWV   R    G+ F+++ D      +     ++       V+        G
Sbjct: 16  AGGEVTVRGWVRTRRDSKAGLSFVNVSDGSCFAPIQVVAPASLGNYESEVKH----LTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  +   + +       E+ A +IE++   E+        +++      ++  L  R 
Sbjct: 72  CSVIATGTLVPSQGQGQSFEIQASRIEVVGWVEDPLTYPMQPKQHSLEYLREFAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           +        R  +  ++        F   STPI+T S  EGA      S ++        
Sbjct: 132 NLFGAVTRIRHCLAQAVHRFFHERGFYWISTPIITTSDAEGAGQMFRVSTLDLANLPRTK 191

Query: 190 --------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ ++
Sbjct: 192 DGEVDFSRDFFGKETFLTVSGQLNVEAYALALSKVYTFGPTFRAENSNTTRHLAEFWMIE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------------TVSNNFLRI 277
            E++F +     +  E+ L+ +F    +                        ++  F RI
Sbjct: 252 PEIAFADLAADADLAEDFLKYLFRTVLDERADDMAFIAERVQKDAITRLESFINAPFERI 311

Query: 278 CYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
            Y +AIR           P+   +   TEH         ++     P   +         
Sbjct: 312 DYSEAIRLLQASGRKFDFPVEWGLDLQTEHERW-----LTEEHVGRPVVVMNYPEHIKAF 366

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIF 360
             R   D     A     PG+  I 
Sbjct: 367 YMRLNDDGKTVAAMDVLAPGIGEII 391



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 55/152 (36%), Gaps = 12/152 (7%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAH---NPFTMPQGGMES---LKGNDLLSIKA 479
           ++  +  +F + +++      E E+ +   H       M          ++ ND     A
Sbjct: 319 LLQASGRKFDFPVEWGLDLQTEHERWLTEEHVGRPVVVMNYPEHIKAFYMRLNDDGKTVA 378

Query: 480 FQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              D++  G  EI  G  R    +V+    +  G+        +       + G  PH G
Sbjct: 379 -AMDVLAPGIGEIIGGSQREERLDVLDARMAQFGLEP----EHYQWYRDLRRYGGVPHAG 433

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              G +R+V+   G  N+R+   +P +    +
Sbjct: 434 FGLGFERLVVYTCGLSNIRDAIAYPRAPGSAE 465


>gi|24214566|ref|NP_712047.1| asparaginyl-tRNA synthetase [Leptospira interrogans serovar Lai
           str. 56601]
 gi|38258378|sp|Q8F522|SYN_LEPIN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|24195533|gb|AAN49065.1|AE011361_1 asparaginyl-tRNA synthetase [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 435

 Score =  164 bits (416), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 68/285 (23%), Positives = 113/285 (39%), Gaps = 10/285 (3%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           DLG   V   V + GWVH +R      FL +R+   I QV+A  +    E+ ++V+    
Sbjct: 11  DLGK-YVDQKVVIQGWVHGIRGSNARQFLSLRNSGKILQVLAEKEILGEEVFQTVKH--- 66

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L  +  V        N     G  EL  + I+I+  +E  P+     +E+        R 
Sbjct: 67  LRQETSVTVIGNLVKNEKSPIG-FELVMESIQIVGESENYPITP---KEHGIDFLISQRH 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R  +  ++R      +F+   TPILT S  E A         + G+
Sbjct: 123 LWLRSSKQLAILRVRDSLSFAIRKYFHERDFLLIDTPILTGSVGESAGTLFSTEYFDLGN 182

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q  Q Y +  +    ++ F   P FR E  ++ R   EF+ ++ E++F    + L
Sbjct: 183 AY-LAQTGQLYLETAIF-AHNKVFCYGPTFRAEKSKTRRHLTEFWMVEAEVAFATHAENL 240

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
              E+ ++ V +E    +      L       +     D P +  
Sbjct: 241 KLQEDFVKTVIKETVQNSFQDLKVLERDPAPLLAYLEKDFPVIDY 285



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 38/118 (32%), Gaps = 14/118 (11%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF--EIASGGIRNHMSEVMLQA 507
           +K       F M           D  ++     DL+      EI  G  R    E ++Q 
Sbjct: 324 QKYPREAKAFYMKVN------PEDPRTVLNA--DLIAPDGVGEIIGGSEREENYENIVQR 375

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
                +        +       + G  PH G   G +R++  + G  +VRE   FP  
Sbjct: 376 LKEEKLPV----ESYDWYLDLRKYGSVPHSGFGLGSERLIAWICGLAHVRECIPFPRM 429


>gi|331703080|ref|YP_004399767.1| Lysine tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010]
 gi|328801635|emb|CBW53788.1| Lysine tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010]
          Length = 500

 Score =  164 bits (416), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 124/290 (42%), Gaps = 13/290 (4%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFE 60
            +Y+ +S  DL   +    V ++G +   R  G    F++I D     Q+    D    +
Sbjct: 45  EKYKDYSKEDLLNLNQ-ELVVVAGRIKLYREAGKKAAFVNIDDQDSSIQLYVRLDEIGDQ 103

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             +  R+  +  I G+      + I      G++ +  +++ +LS A           + 
Sbjct: 104 SFEYFRNFDLGDIIGV------KGIMMRTDHGELSIRCKEVVLLSKALRPLPDKHAGIQD 157

Query: 121 PESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGAR 178
            E   ++ R++DL  +  + K    RT+II +++  +  + ++E  TPIL +      A+
Sbjct: 158 IEEK-YRRRYVDLIMNHDVRKTFQARTKIIRTLQNFLDNKGYMEVETPILHSLKGGASAK 216

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+    V     Y L  A + + + L+  GF+  ++I   FR+E   +   P EF  ++
Sbjct: 217 PFITHYNVLNTDVY-LRIATELHLKRLIVGGFEGVYEIGRIFRNEGMSTRHNP-EFTSIE 274

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
           + +++ +   +++  E + R      ++ + +  N ++I      +R   
Sbjct: 275 LYVAYEDMFFLMDLTEEIFRVCNAAVNSSSIIEYNNVKIDLSKPFKRLHM 324



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 4/104 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV----GISKEVVENRFGGL 525
           K N        +++L   G E A+     +      + F           +   +     
Sbjct: 397 KSNPSDPRFTDRFELFILGREYANAFSELNDPIDQYERFKAQIEEESKGNDEANDMDIDF 456

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             A +  MPP  GI  GIDR+VM L  ++++++V LFP  +   
Sbjct: 457 IEALEHAMPPTAGIGIGIDRLVMFLTNSESIKDVLLFPQMKPRE 500


>gi|45657877|ref|YP_001963.1| asparaginyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|59798558|sp|Q72QT4|SYN_LEPIC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|45601118|gb|AAS70600.1| asparaginyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 435

 Score =  164 bits (416), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 65/279 (23%), Positives = 110/279 (39%), Gaps = 9/279 (3%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V   V + GWVH +R      FL +R+   I QV+A  +    E+ ++V+    L  +  
Sbjct: 16  VDQKVVIQGWVHGIRGSNARQFLSLRNSGKILQVLAEKEILGEEVFQTVKH---LRQETS 72

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V        N     G  EL  + I+I+  +E  P+     +E+        R L LR  
Sbjct: 73  VTVIGNLVKNEKSPIG-FELVMESIQIVGESENYPITP---KEHGIDFLISQRHLWLRSS 128

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R  +  ++R      +F+   TPILT S  E A         + G+ Y L Q
Sbjct: 129 KQLAILRVRDNLSFAIRKYFHERDFLLIDTPILTGSVGESAGTLFSTEYFDLGNAY-LAQ 187

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
             Q Y +  +    ++ F   P FR E  ++ R   EF+ ++ E++F    + L   E+ 
Sbjct: 188 TGQLYLETAIF-AHNKVFCYGPTFRAEKSKTRRHLTEFWMVEAEVAFATHAENLKLQEDF 246

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           ++ V +E    +      L       +     D P +  
Sbjct: 247 VKTVIKETVQNSFQDLKVLERDPAPLLAYLEKDFPVIDY 285



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 38/118 (32%), Gaps = 14/118 (11%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF--EIASGGIRNHMSEVMLQA 507
           +K       F M           D  ++     DL+      EI  G  R    E ++Q 
Sbjct: 324 QKYPREAKAFYMKVN------PEDPRTVLNA--DLIAPDGVGEIIGGSEREENYENIVQR 375

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
                +        +       + G  PH G   G +R++  + G  +VRE   FP  
Sbjct: 376 LKEEKLPV----ESYDWYLDLRKYGSVPHSGFGLGSERLIAWICGLAHVRECIPFPRM 429


>gi|325092841|gb|EGC46151.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 971

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 71/366 (19%), Positives = 139/366 (37%), Gaps = 28/366 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH-YGITQVVANP----DSACFEIAKSV 65
           +    +G  V     VH +R     ++F+  R     +  V+A       +   +  + +
Sbjct: 156 ITPHSIGQEVTFRARVHHIRNMSSKLVFVIFRQQVTTMQGVLAEKPGVISTLMVQWVERI 215

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--------VFGE 117
           R   ++ + G++ S         I    +EL  Q++ ++   E+                
Sbjct: 216 RVGSIVKVRGVLSSSKVPVTGCTIH--DVELDIQELHVVVHREDPIPFSVYEAELLNKDA 273

Query: 118 REYP-------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           +          +  R   R LDLR DT       ++ I N  R  + A+ FIE  TP L 
Sbjct: 274 KNTDGRRNHVLDRTRLSNRILDLRTDTSQSIFRIQSAISNLFRAALDAQGFIEIHTPKLQ 333

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           +S+ E            + +F A  Q+PQ  KQ+ +A+ F+R ++I   FR E+  + R 
Sbjct: 334 SSATESGASVFEVKYFTREAFLA--QSPQLAKQMAIAADFERVYEIGAVFRAENSNTHRH 391

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             E+  LD+EM+  E   + L T+++VL+ +F+          + ++  +      +  +
Sbjct: 392 LTEYTGLDIEMAIEEHYHEALETIDSVLKEIFKGIYGRYRREVDIIKGQFPHEDLVWLDE 451

Query: 290 KP--DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
            P       I + N +      E    ++ L       +  +  +    +    D+  + 
Sbjct: 452 TPIIPFAEGIKLLNDSGWRQDGEELSVNEDLGTRDEIRLGELIKEKYHTDYYILDKFPKP 511

Query: 348 ARSQGQ 353
           AR    
Sbjct: 512 ARPFYA 517



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/179 (24%), Positives = 67/179 (37%), Gaps = 29/179 (16%)

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELG-IINCNCFEFCWIMD-FPFYEWNEEEKKID 453
            DS +   G+ L         R+ I   LG +I        +I+D FP            
Sbjct: 465 NDSGWRQDGEELSVNEDLG-TRDEI--RLGELIKEKYHTDYYILDKFP-----------K 510

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
            A   + M          +         +D+   G EI SGG R H  +++ Q     GI
Sbjct: 511 PARPFYAMEDPENPDFTNS---------FDIFVRGQEIVSGGQRIHDEKILEQRMKEAGI 561

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
           +   +E         F+ G PPH G   G++R++ML+L   N+R  SLF         +
Sbjct: 562 NPLAMEE----YLEGFRWGAPPHAGAGIGLERLLMLILKLGNIRLASLFHRDPKSFQDM 616


>gi|224000023|ref|XP_002289684.1| asparaginyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220974892|gb|EED93221.1| asparaginyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 487

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 57/282 (20%), Positives = 102/282 (36%), Gaps = 33/282 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHY--GITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GWV  VR    + F+++ D    G  Q V   D    +   ++ +       G  +
Sbjct: 25  VSVKGWVKTVRKQKTLAFVEVNDGSNMGGIQCVVPFDGVDEDTLAAIDN----LTTGCSV 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
             +   +N+      +ELSA  + ++        P+  +R   E +R     L  R +T+
Sbjct: 81  HATGLIVNSQGGKQSVELSASSLRVVGTCPGETFPLAKKRHSLEYLR-TIAHLRPRTNTI 139

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS-------- 190
                 R+ +  S+      E F    TP++TAS  EGA +    + +N           
Sbjct: 140 AAVARVRSTLAGSIHSFFQGEGFQYVQTPLITASDCEGAGEMFRVTTLNTDDVSSLPRAK 199

Query: 191 ---------------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                          F+   A      Q      A      +   P FR E+ ++ R   
Sbjct: 200 DEDGKELPGVDYTEDFFGKAAFLTVSGQLGGETYACALGDVYTFGPTFRAENSQTARHLA 259

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           EF+ ++ EM+F +    ++  E++L+ V  E          F
Sbjct: 260 EFWMVEPEMAFADLTSAMDNAESMLKSVVGEVLEKCDEDLTF 301



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 64/169 (37%), Gaps = 28/169 (16%)

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE----------EKKIDFAHNP 458
           +       +  IA+     + + ++      FP  E+  +          E K + A   
Sbjct: 327 YRDAIGYLQEEIAK-----DPSKWQ------FPEVEFGTDLATEHERWLAETKFESAVFV 375

Query: 459 FTMPQGGME-SLKGNDLLSIKA-FQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISK 515
           +  P+      ++ ND    +     DL+  G  E+  G  R    +V+++    +G++ 
Sbjct: 376 YNYPKKIKAFYMRDNDEDGGETVNAMDLLVPGVGELVGGSQREERLDVLIEKMKELGLN- 434

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              E  +       + G  PH G   G +R+V  + G +N+R+   +P 
Sbjct: 435 ---EEDYWWYLDLRRFGSVPHAGYGLGFERLVTYVCGIENIRDAIAYPR 480


>gi|66828391|ref|XP_647550.1| asparagine-tRNA ligase [Dictyostelium discoideum AX4]
 gi|74859257|sp|Q55FI3|SYNM_DICDI RecName: Full=Proabable asparaginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS;
           Flags: Precursor
 gi|60475568|gb|EAL73503.1| asparagine-tRNA ligase [Dictyostelium discoideum AX4]
          Length = 460

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 119/345 (34%), Gaps = 44/345 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
               +G  +++ GWV  +R    + F+++ D   I  +    D   F     ++    + 
Sbjct: 22  NKDLIGKEIKVKGWVRNIRNQKSVSFIELGDGSSIKGLQIVGDKDSF---SKLKYGSSIE 78

Query: 73  IDGLVMSRSAETINANIITGQIELSAQK-IEILSVAEELPLPVFGEREYPESIRFKYRFL 131
           ++G +++       A      IE+   +  +++    +        + +          +
Sbjct: 79  VNGKLINSLGNDKEA------IEVQLTEPYKLIGNCPDCYPLQ--PKNHSFEFLRDIAHI 130

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-- 189
             R +++   +  R +    +        FI   TPI+TAS  EG  +            
Sbjct: 131 RSRGNSIGALLRVRNKSTQLIHQYFNDNGFINVHTPIITASDCEGGGEQFQIKSSLDTKE 190

Query: 190 -SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             F+  P       Q +  + A    R +   P FR E   + R   EF+ ++ EM+F++
Sbjct: 191 SMFFGQPSFLTVSGQLEAEIYACSHSRVYTFGPTFRAEKSNTPRHLSEFWMIEPEMAFID 250

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRICYDDAIR 284
            +D L+  E+  + +     +                            F+R+ Y DAI+
Sbjct: 251 LNDNLDIAEDFCKYLIRNLLDSCKEDIEFFNKRIDTNLLSRLEKTLSTPFIRLEYKDAIQ 310

Query: 285 RYGTDKPDLRNPIIMHN-----VTEHFVHSEFRVFSKILSVNPGY 324
               +   ++    +       +T HF      V +   S+ P Y
Sbjct: 311 LLQNNNHPIKWGDDIQREQEKFITTHFGEIPVFVINWPKSIKPFY 355



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 56/134 (41%), Gaps = 18/134 (13%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             +++++P             +  PF M +   E    ++++   +    LV    E+  
Sbjct: 341 PVFVINWP------------KSIKPFYMREN--EQTDHSNIMPTVSNMDLLVPTVGELIG 386

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G IR    + +L   + +G+ K    +++       + G  PHGG   G +R +  + G 
Sbjct: 387 GSIREERYDKLLNTINEMGMDK----DQYSWYLDLRKYGTVPHGGFGLGFERFLQFVTGL 442

Query: 554 KNVREVSLFPMSQN 567
           +N+++V   P  QN
Sbjct: 443 QNIKDVIPIPRHQN 456


>gi|157872175|ref|XP_001684636.1| aspartyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68127706|emb|CAJ05889.1| putative aspartyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 550

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 61/283 (21%), Positives = 113/283 (39%), Gaps = 20/283 (7%)

Query: 2   HRYRTHS-CGDL-GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPD 55
           ++ RTH    +L     V   V +   V   R  G + F+ +RD       +  V  +  
Sbjct: 60  YKSRTHIPVSELSRPELVDKTVLIRARVSTTRKKGKMAFMVLRDGSDSVQAMAAVEGDVP 119

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               +    + +E ++ ++  V     E    +     IEL  +KI  ++ +        
Sbjct: 120 KEMIDFMGQIATESIVDVEATVCKV--EQPITSTSHSDIELKVKKIHTVTESLRTLPFTL 177

Query: 116 GER---------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
            +          +     R   R++DLR          ++R+    R  +I ++F E  +
Sbjct: 178 EDASRKESAEGAKVNLDTRLNSRWMDLRTLASGAIFRLQSRVCQYFRQFLIDKDFCEIHS 237

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P +  +  EG  +       N+  F  L Q+PQ YKQ+++     R F++ P FR E+  
Sbjct: 238 PKIINAPSEGGANVFKLEYFNR--FAYLAQSPQLYKQMVLQGDVPRVFEVGPVFRSENSN 295

Query: 227 SDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGN 268
           + R   EF  LD+EM   E   ++L+  E++   +FE  +   
Sbjct: 296 THRHLTEFVGLDVEMRIDEHYYEVLDVAESLFNYIFERLATHT 338



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   +  PF   +   +    N         YD+   G EI+SG  R H  +++L     
Sbjct: 442 RFPSSARPFYTMECKDDVRFTN--------SYDMFIRGEEISSGAQRIHDPDLLLARAKM 493

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           + +    ++        +F+ G  PHGG   G++R+VML LG  NVR  SLFP       
Sbjct: 494 LNVDLTPIKE----YVDSFRLGAWPHGGFGIGLERVVMLYLGLSNVRLASLFPRDPQRTT 549

Query: 571 L 571
            
Sbjct: 550 P 550


>gi|91215097|ref|ZP_01252069.1| asparaginyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91186702|gb|EAS73073.1| asparaginyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 480

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 57/356 (16%), Positives = 124/356 (34%), Gaps = 38/356 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L    V    +++GWV   R +    F+ + D   +  +    D    +           
Sbjct: 10  LESDQVLQEYKVNGWVRAFRSNR---FIALNDGSCLENLQCVVDFKNTD-----DQVLRK 61

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FGEREYPESIRFKY 128
              G  +S S     +      +EL  + I IL  A    +       ++   E +R + 
Sbjct: 62  VTTGAAISVSGTLKESEGKGQSVELEVKSINILGEAHPEEVKKTILQPKKHSFEKLR-EQ 120

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L +R +T    +  R+++  ++        F   +TPI+T S  EGA +    + ++ 
Sbjct: 121 AHLRVRTNTFGAIMRVRSKLSFAVHQYFNDNGFFYVNTPIVTGSDAEGAGEMFKVTNLDL 180

Query: 189 GS--------------FYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                           F+          Q +    A G  + +   P FR E+  + R  
Sbjct: 181 KDPPKTKDGEIDYSQDFFGKETNLTVSGQLEAETYAMGLGKVYTFGPTFRAENSNTTRHL 240

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF+ ++ E++F +    ++  E+ ++ V +  +        FL    +  +    +   
Sbjct: 241 AEFWMIEPEVAFCDLKGNIDLAEDFIQQVLKYITEHCKSDLEFLE---NRLLEEEKSKPE 297

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
             R+P+ +    +  + + F+  S   +++       +        + F   + EW
Sbjct: 298 KDRSPMPLREKIDFVLKNNFKRVSYTEAID------ILRNSKPNKKKKFSYIIKEW 347



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 14/126 (11%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMS 501
           +E              F M          +D  +++A   D++  G  EIA G  R    
Sbjct: 364 FECPVVIYDYPADIKAFYMR-------LNDDGKTVRAM--DVLFPGIGEIAGGSQREERY 414

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           +V+L     +GI ++ +           + G   H G   G +R+V+   G  N+R+V  
Sbjct: 415 DVLLSKMREIGIDEKELW----WYLDTRKFGTCVHSGFGLGFERLVLFATGMSNIRDVIP 470

Query: 562 FPMSQN 567
           +P S  
Sbjct: 471 YPRSPQ 476


>gi|154311528|ref|XP_001555093.1| hypothetical protein BC1G_06223 [Botryotinia fuckeliana B05.10]
 gi|150850734|gb|EDN25927.1| hypothetical protein BC1G_06223 [Botryotinia fuckeliana B05.10]
          Length = 607

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 54/318 (16%), Positives = 118/318 (37%), Gaps = 24/318 (7%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA-----NPDSACFEIAKS-VRSEWVLC 72
            +RL   ++  R  G  ++F D++      QV+         +  FE     +R   V+ 
Sbjct: 125 EIRLGARIYNKRASGNKLVFYDVKSEDTKIQVMCQLQESREGAPAFESQHEPLRRGDVIG 184

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G     + +        G++ + A +I +L+   +     +   +     R + R+LD
Sbjct: 185 IVGYPGRTAPKNKIEKGEEGELSIFATEIILLTPCVQQLPDEYYGFK-DNEKRHRQRYLD 243

Query: 133 LRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           L  +   + + + R+ +   +R    + +F E  TP++ + +             +    
Sbjct: 244 LIMNDASRKVLMTRSDMTAYIRNYFNSRDFKEVETPMMNSIAGGATAKPFKTHHNDLNMD 303

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +  AP+ Y ++L+  G +R +++   FR+E       P EF   +  M++ +  D ++
Sbjct: 304 MFMRIAPELYLKMLVVGGMNRVYEMGRQFRNEGIDLTHNP-EFTTCEFYMAYADVYDTMD 362

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVT------ 303
             E ++ G+ +  + G T   +                 P  R  +I  +   T      
Sbjct: 363 MTEELVSGLVKHITGGTTTKFH----TQHGEEYEVNWAAPWKRIEMIPALEEATGEKFPP 418

Query: 304 --EHFVHSEFRVFSKILS 319
             E         F ++L 
Sbjct: 419 ADELHTDESNEFFKRVLK 436



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 10/136 (7%)

Query: 444 EWNEEE--KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           E+ EE          +P  M        K +        +++      EI +     +  
Sbjct: 458 EFIEETCINPTFITEHPKMMSPLA----KNHRSKPGLCERFEAFVCKKEIVNAYTELNDP 513

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F      K+  ++          RA + G+PP  G   GIDR+VM L    +++
Sbjct: 514 FEQRLRFEEQARQKDQGDDEAQMIDENFVRALEFGLPPTAGWGMGIDRLVMFLTDNYSIK 573

Query: 558 EVSLFPMSQNFCDLLM 573
           EV  FP  +   ++  
Sbjct: 574 EVLTFPFMKEEVNIHT 589


>gi|296439739|sp|A0QHC4|LYSX_MYCA1 RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
          Length = 1177

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 10/259 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D    + ++G + R+R  GG++F  +RD  G  QV+ +      E  ++ 
Sbjct: 723 SHTVAQALDADDQQDITVAGRILRIRDFGGVLFAQLRDWSGEMQVLLDNSR--LERGRTA 780

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                + +  LV        +     G   L      ++      PLP   +       R
Sbjct: 781 DFTAAIDLGDLVEVSGQMGFSKK---GTRSLIVTDWRMIGKCLR-PLPNKWKGLTDPEAR 836

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R++DL  +   + ++  R+ ++ S+R  + A+ FIE  TPIL        AR F+  
Sbjct: 837 VRTRYVDLAVNPESRELIAARSEVLRSVRQTLFAKGFIEVETPILQQIHGGATARPFVTH 896

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 897 INTYDMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 954

Query: 244 VEQDDILNTMENVLRGVFE 262
            +    ++    +++   +
Sbjct: 955 ADYRVWIDGCRELIQNAAQ 973



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 56/162 (34%), Gaps = 28/162 (17%)

Query: 406  PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
            P +    A      + + L  +     E  + +DFP             + +P T P   
Sbjct: 1035 PYRAHWDAGAVVLELYEHL--VEDRTEEPTFYVDFP------------TSVSPLTRPHRS 1080

Query: 466  MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENR 521
                         A ++DLV  G E+A+            +      +            
Sbjct: 1081 ---------RPGVAERWDLVAWGVELATAYSELTDPVEQRRRLQEQSLLAAGGDPEAMEL 1131

Query: 522  FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 +A +  MPP GG+  G+DR+VML+ G  ++RE   FP
Sbjct: 1132 DEDFLQAMEYAMPPTGGLGMGVDRLVMLITGR-SIRETLPFP 1172


>gi|254775578|ref|ZP_05217094.1| lysyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 1085

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 10/259 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D    + ++G + R+R  GG++F  +RD  G  QV+ +      E  ++ 
Sbjct: 631 SHTVAQALDADDQQDITVAGRILRIRDFGGVLFAQLRDWSGEMQVLLDNSR--LERGRTA 688

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                + +  LV        +     G   L      ++      PLP   +       R
Sbjct: 689 DFTAAIDLGDLVEVSGQMGFSKK---GTRSLIVTDWRMIGKCLR-PLPNKWKGLTDPEAR 744

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R++DL  +   + ++  R+ ++ S+R  + A+ FIE  TPIL        AR F+  
Sbjct: 745 VRTRYVDLAVNPESRELIAARSEVLRSVRQTLFAKGFIEVETPILQQIHGGATARPFVTH 804

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 805 INTYDMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 862

Query: 244 VEQDDILNTMENVLRGVFE 262
            +    ++    +++   +
Sbjct: 863 ADYRVWIDGCRELIQNAAQ 881



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 56/162 (34%), Gaps = 28/162 (17%)

Query: 406  PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
            P +    A      + + L  +     E  + +DFP             + +P T P   
Sbjct: 943  PYRAHWDAGAVVLELYEHL--VEDPTEEPTFYVDFP------------TSVSPLTRPHRS 988

Query: 466  MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENR 521
                         A ++DLV  G E+A+            +      +            
Sbjct: 989  ---------RPGVAERWDLVAWGVELATAYSELTDPVEQRRRLQEQSLLAAGGDPEAMEL 1039

Query: 522  FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 +A +  MPP GG+  G+DR+VML+ G  ++RE   FP
Sbjct: 1040 DEDFLQAMEYAMPPTGGLGMGVDRLVMLITGR-SIRETLPFP 1080


>gi|118467307|ref|YP_882312.1| lysyl-tRNA synthetase [Mycobacterium avium 104]
 gi|118168594|gb|ABK69491.1| lysyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 1075

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 10/259 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D    + ++G + R+R  GG++F  +RD  G  QV+ +      E  ++ 
Sbjct: 621 SHTVAQALDADDQQDITVAGRILRIRDFGGVLFAQLRDWSGEMQVLLDNSR--LERGRTA 678

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                + +  LV        +     G   L      ++      PLP   +       R
Sbjct: 679 DFTAAIDLGDLVEVSGQMGFSKK---GTRSLIVTDWRMIGKCLR-PLPNKWKGLTDPEAR 734

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R++DL  +   + ++  R+ ++ S+R  + A+ FIE  TPIL        AR F+  
Sbjct: 735 VRTRYVDLAVNPESRELIAARSEVLRSVRQTLFAKGFIEVETPILQQIHGGATARPFVTH 794

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 795 INTYDMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 852

Query: 244 VEQDDILNTMENVLRGVFE 262
            +    ++    +++   +
Sbjct: 853 ADYRVWIDGCRELIQNAAQ 871



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 56/162 (34%), Gaps = 28/162 (17%)

Query: 406  PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
            P +    A      + + L  +     E  + +DFP             + +P T P   
Sbjct: 933  PYRAHWDAGAVVLELYEHL--VEDRTEEPTFYVDFP------------TSVSPLTRPHRS 978

Query: 466  MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENR 521
                         A ++DLV  G E+A+            +      +            
Sbjct: 979  ---------RPGVAERWDLVAWGVELATAYSELTDPVEQRRRLQEQSLLAAGGDPEAMEL 1029

Query: 522  FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 +A +  MPP GG+  G+DR+VML+ G  ++RE   FP
Sbjct: 1030 DEDFLQAMEYAMPPTGGLGMGVDRLVMLITGR-SIRETLPFP 1070


>gi|41407449|ref|NP_960285.1| lysyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
           K-10]
 gi|81414391|sp|Q740J9|LYSX_MYCPA RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|41395801|gb|AAS03668.1| LysX [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 1177

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 10/259 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D    + ++G + R+R  GG++F  +RD  G  QV+ +      E  ++ 
Sbjct: 723 SHTVAQALDADDQQDITVAGRILRIRDFGGVLFAQLRDWSGEMQVLLDNSR--LERGRTA 780

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                + +  LV        +     G   L      ++      PLP   +       R
Sbjct: 781 DFTAAIDLGDLVEVSGQMGFSKK---GTRSLIVTDWRMIGKCLR-PLPNKWKGLTDPEAR 836

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R++DL  +   + ++  R+ ++ S+R  + A+ FIE  TPIL        AR F+  
Sbjct: 837 VRTRYVDLAVNPESRELIAARSEVLRSVRQTLFAKGFIEVETPILQQIHGGATARPFVTH 896

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 897 INTYDMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 954

Query: 244 VEQDDILNTMENVLRGVFE 262
            +    ++    +++   +
Sbjct: 955 ADYRVWIDGCRELIQNAAQ 973



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 56/162 (34%), Gaps = 28/162 (17%)

Query: 406  PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
            P +    A      + + L  +     E  + +DFP             + +P T P   
Sbjct: 1035 PYRAHWDAGAVVLELYEHL--VEDRTEEPTFYVDFP------------TSVSPLTRPHRS 1080

Query: 466  MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENR 521
                         A ++DLV  G E+A+            +      +            
Sbjct: 1081 ---------RPGVAERWDLVAWGVELATAYSELTDPVEQRRRLQEQSLLAAGGDPEAMEL 1131

Query: 522  FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 +A +  MPP GG+  G+DR+VML+ G  ++RE   FP
Sbjct: 1132 DEDFLQAMEYAMPPTGGLGMGVDRLVMLITGR-SIRETLPFP 1172


>gi|83319692|ref|YP_424771.1| asparaginyl-tRNA synthetase [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|123753712|sp|Q2SR42|SYN_MYCCT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|83283578|gb|ABC01510.1| asparaginyl-tRNA synthetase [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 454

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 105/273 (38%), Gaps = 18/273 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSE 68
           +     +   + L   V   R    + F+ + D    T +       +  +E A   R  
Sbjct: 8   EQNSELIDQEIELIARVRSNRQGKFVSFMILNDGTTFTDLQVVYKTKTKGYEQALQARVS 67

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G V+    +         + E+ A  IE++  A E       ++E+      + 
Sbjct: 68  SIVKVIGRVVLTPEKQ-------QKFEVQADAIELIDQAIEDYPLQ--KKEHTTEYLREI 118

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVN 187
             L  +  T +     R+    ++        F+   +PI+T++  EGA + FLV +R +
Sbjct: 119 AHLRAKTKTFNAIFKIRSAAAYAIHKFFNDRGFVYIHSPIITSNDAEGAGEAFLVTTRED 178

Query: 188 ---QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
              +  F+A   +     Q      A  F + +   P FR E+  + +   EF+ ++ E+
Sbjct: 179 ADYEKDFFAKKASLTVSGQLHAEAFAQAFKKVYTFGPTFRAENSNTAKHAAEFWMIEPEV 238

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           +F +  D +  ++++++ +       N     F
Sbjct: 239 AFADLKDNIQLIQDMVKYIINYIFKHNRRELEF 271



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 28/137 (20%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              ++ ++P     +E K        F M Q         D  ++ A   DL+  G  E+
Sbjct: 340 APTFVTNYP-----KEIK-------AFYMKQNE-------DNKTVAAV--DLLVPGIGEL 378

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIAAGIDRIVMLL 550
             G  R    E +++    V I  + +E          +  G     G   G +R++M +
Sbjct: 379 VGGSQREDNYEKLIKRCKEVNIDIDQLEWY-----NNLRLYGYYKSAGFGLGFERLIMYI 433

Query: 551 LGAKNVREVSLFPMSQN 567
            GA N+R+V  FP +  
Sbjct: 434 TGASNIRDVIPFPRTPK 450


>gi|321261513|ref|XP_003195476.1| aspartate--tRNA ligase [Cryptococcus gattii WM276]
 gi|317461949|gb|ADV23689.1| Aspartate--tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 884

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 67/337 (19%), Positives = 136/337 (40%), Gaps = 18/337 (5%)

Query: 17  VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCI 73
            G+ V +   +H+ R     + F+ +R    + Q V +        +  + +  E ++ +
Sbjct: 111 AGTKVNVRSRIHQQRDLSSRLNFILLRQRGFVIQGVLSEHASEHMIKWVQHLPHEAIVQV 170

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +         A      +EL  +++ ++  + ++P  +      P+S R + R LDL
Sbjct: 171 SGTLREPPKPITAAVDTP--LELDIERLYLVETSHDIPFNLAHGDRPPQSTRLRNRTLDL 228

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R  T       R +++   R  +    F+E +TP L  S+ E   +    +   + +F A
Sbjct: 229 RHPTTQAIFKIRAKVLKVFRDTLDDLGFLEINTPKLQPSATESGAEVFRVNYFGRKAFLA 288

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNT 252
             Q+PQ  KQ+ +++ F R ++I P FR E+  + R   E+  LD+EM+   E  ++   
Sbjct: 289 --QSPQLMKQMAISADFRRVYEIGPVFRAENSNTHRHLTEYTGLDIEMTIQQEYYEVFRV 346

Query: 253 MENVLRGVFEEFSNG----NTVSNNFL----RICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           ++ +LR +F+         + V   F     ++  +  I  +      LR+     +V E
Sbjct: 347 LDIILRNIFKAIKGMKLELDRVREFFPSDDFQLPEETPIIPFHEAVQMLRDD--GRDVEE 404

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
               +   +    L        + +  K     R F 
Sbjct: 405 EDFSTPDEIRLGELIKEKLGTDYYVIDKFPVSARPFY 441



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 17/127 (13%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   +  PF     G                +D+   G EI +GG R +  + + ++   
Sbjct: 432 KFPVSARPFYTANDGKI-----------TNSFDMFIRGQEICTGGQRINDPKKLRESMEE 480

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI+++ +        +AF  GMPPHGG   G++RIV   L   +VR  +L+    +   
Sbjct: 481 SGINEDEMAE----YLQAFDWGMPPHGGAGLGVERIVTFFLNLPDVRLSTLWHRDPHS-- 534

Query: 571 LLMGSPS 577
           L    PS
Sbjct: 535 LPTKPPS 541


>gi|300176701|emb|CBK24366.2| Lysyl-tRNA synthetase [Blastocystis hominis]
          Length = 512

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 63/300 (21%), Positives = 121/300 (40%), Gaps = 21/300 (7%)

Query: 2   HRYRTHSCGDLGVS---------DVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVV 51
           H + +HS  D             D  S V ++G +   R  G  + F DIR    + QV+
Sbjct: 34  HFHVSHSLSDFRSKWDYLKNGERDEASEVYVAGRIINKRSAGSKLYFYDIRSGETMLQVM 93

Query: 52  AN------PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105
           ++       D    E  +  +        G V+         ++  G++ +  ++I +L+
Sbjct: 94  SSLNTYETNDPTPEEKKEHFKHIHKNLRTGDVIGIHGIPGRTDM--GELSVLPKQITLLA 151

Query: 106 VAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
                 +P          ++++ R+LDL       +    R++II  +R  + AE F++ 
Sbjct: 152 PCL-WTVPREWHELKDPDVKYRKRYLDLLISQHTRQVFYTRSKIIQLIRSFLTAEGFLDV 210

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            T IL+  +        V    +Q    AL  +P+   + L+  G DR F++   FR+E 
Sbjct: 211 ETSILSGLAGGAVATPFVTRSQSQNRDLALRISPELALKELVVGGLDRVFEMGKVFRNEG 270

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
             S     EF  ++  M+F +  D +   E +L  V  E +  +++  +  +I +    R
Sbjct: 271 LDSKHN-FEFTSVEAYMAFHDYTDWMRLTEKLLHHVCVEVNQADSLMVDGTQISFAPPYR 329



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 5/116 (4%)

Query: 459 FTMPQGG-MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML----QAFSNVGI 513
           F M     M  L   +  + K+ +++L  NG EI +     +          +      I
Sbjct: 394 FIMNHPAVMSPLSKVNEATGKSERFELFVNGVEIVNAYTEQNDPVKQEMSFAKQGEQRAI 453

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             + +         A + G+PP  G   G+DR+VML+    ++R+V  FP+ +   
Sbjct: 454 GDKEIPPADLTFLNALEYGLPPTAGWGMGVDRLVMLMTNQSSIRDVIFFPVLKEAE 509


>gi|184201564|ref|YP_001855771.1| lysyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183581794|dbj|BAG30265.1| lysyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 510

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 58/279 (20%), Positives = 110/279 (39%), Gaps = 23/279 (8%)

Query: 1   MHRY-----RTHSCGDLGVS--------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI 47
           MH Y     RT +   +           +    V ++G V  VR  G + F  +++  G 
Sbjct: 44  MHPYPVGVHRTATLASVRAEFGHLADGEETDHVVTVAGRVVHVRNTGKLCFGTLQEGDGT 103

Query: 48  TQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
              V    +   + A  +     L   G  ++ +   I++    G++ + A    + S A
Sbjct: 104 RLQVMLSKANVGDEA--LAQWKALVDLGDFVAVTGRVISSR--RGELSVMADSWTMASKA 159

Query: 108 EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECST 166
                 +   +E  E  R + R+LDL      +++V  R+ I  ++R  M  + ++E  T
Sbjct: 160 LRPLPTM--HKELNEETRVRQRYLDLIVRQEARDVVLTRSLITRTVRRVMEQQGYVEIET 217

Query: 167 PILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           P+L        AR F             L  A + Y +  +  G D+ F+I   FR+E  
Sbjct: 218 PMLQLVHGGAAARPFETHLNAFDQDM-TLRIATELYLKRAVVGGIDKVFEIGRVFRNEGV 276

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
            S   P EF  L+   ++ +Q D+ + +  +++    + 
Sbjct: 277 DSSHSP-EFTTLEAYEAYADQFDMADRIREIIQECARQL 314



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 72/232 (31%), Gaps = 29/232 (12%)

Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398
              + + E AR  G  G+     R++  G    +  V   L+      I      +   +
Sbjct: 302 RIREIIQECARQLGVEGIDTPQGRIELFGEWQWVS-VYPGLSEAVGREITPETPAEQLRA 360

Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
                  P+     A      + +E  I+     +  ++ D+P        + +   H  
Sbjct: 361 VAAERDIPVNPAWDAQKLVMELFEE--IVEPTLLQPTFVYDYP-----PAAQPLARPHR- 412

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----S 514
                                  +DL+  G E  +         V  +  +   +     
Sbjct: 413 ---------------EKPGVIEAWDLIIGGMERGTAFSELVDPVVQRERLTEQSLLSAAG 457

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                       RA + G PP GG+  G+DR++ML      +RE  LFP+ +
Sbjct: 458 DHEAMQLDEDFLRALEHGAPPMGGMGLGLDRLIMLFTNLG-IRETILFPLMK 508


>gi|150391128|ref|YP_001321177.1| aspartyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149950990|gb|ABR49518.1| aspartyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 432

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 70/299 (23%), Positives = 131/299 (43%), Gaps = 32/299 (10%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M R R     +LG   + S V L GWVH+++      F+ +RD  GI Q+V + +    E
Sbjct: 3   MKRIR---IQELGEQ-IQSEVLLKGWVHKIKNFSQFAFVLLRDKTGIVQLVLDDE----E 54

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-- 118
           + K ++ E  + ++G V+      +N     G +E+  + +  +       LP    +  
Sbjct: 55  MIKGLKLEMAVEVEGKVV------VNKTTPEG-VEIQVKNMRTVGKTYYDLLPFSINQRQ 107

Query: 119 -EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                  +  +R + LRR         +  I+ S R  +    F E  TP + AS  EG 
Sbjct: 108 MNAALETQLDHRSISLRRPNKRAVFKVQEEIVESFRNYLRGLGFSEIHTPKIVASGTEGG 167

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +    +  ++ +F A  Q+PQ YKQ+++ +GF+  F+I   +R E   + R   E+  L
Sbjct: 168 SEVFTVNYFDRRAFLA--QSPQFYKQMMVGAGFEAVFEIGHAYRAELHNTWRHLNEYVSL 225

Query: 238 DMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           D+E+ F+E  +++++  E  ++ +F+                    ++  G D  D+  
Sbjct: 226 DIEIGFIENEEELMDLEEGFIKYLFKHLQE-----------TCSRELKMLGKDLADINE 273



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 4/130 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
             ++ +E+ K DF                 +D        +DL+  G EI +GG R H  
Sbjct: 307 LSQYIKEKYKSDFVFITKYPAAKRPMYTMPDDKGEGMTKSFDLIYKGLEITTGGQRIHDY 366

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           +++ +     G +       F      F+ GMPPHGG A G++R+ M +L  +N+RE +L
Sbjct: 367 QMLKENIIKFGSNP----EDFDFYLETFKYGMPPHGGFAIGLERLTMKILDLENIREATL 422

Query: 562 FPMSQNFCDL 571
           FP   N    
Sbjct: 423 FPRDLNRITP 432


>gi|224087415|ref|XP_002308157.1| predicted protein [Populus trichocarpa]
 gi|222854133|gb|EEE91680.1| predicted protein [Populus trichocarpa]
          Length = 530

 Score =  164 bits (415), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 68/285 (23%), Positives = 114/285 (40%), Gaps = 30/285 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRD-HYGITQV-VANPD---SACFEIA 62
            GDL        V + G     R  G  + F+ +R+  + +  V  A PD       + A
Sbjct: 71  VGDLTHELKEKEVLIRGRAQTTRAVGKNMAFVVVREKGFTVQCVVTARPDVVSKQMVKFA 130

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +  E ++ I G+V   S  +I     T Q+E+   K+  +  A         +    E
Sbjct: 131 AGLSRESIVDIHGVV---SVPSIAIKGTTQQVEIQVSKLYCVDKAMPTLPINIEDASRSE 187

Query: 123 ------------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
                               R  YR LD R          + ++ N  R  +++E+F+E 
Sbjct: 188 KEIEEALEAGEQLVRVNQDTRLNYRVLDFRTSANQGIFRIQCQVCNIFRQFLLSEDFVEI 247

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP L A S EG           +G    L Q+PQ +KQ+ +   F R F+I P FR ED
Sbjct: 248 HTPKLIAGSSEGGSAVFKLDY--KGQAACLAQSPQLHKQMAICGDFGRVFEIGPVFRAED 305

Query: 225 PRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGN 268
             + R   EF  LD+EM   +   ++++ ++++   +F+  +   
Sbjct: 306 SYTHRHLCEFTGLDVEMEIKQHYTEVMDIVDHLFVTMFDHLNKKC 350



 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 17/126 (13%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   A  PF            +D     +  +D+   G EI SG  R H+ E +++    
Sbjct: 422 RYPLAVRPFYTMPC------YDDPK--YSNSFDVFIRGEEIISGAQRVHVPEFLVERAQA 473

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI    +         +F+ G PPHGG  AG++R+VML  G  N+R+ SLFP      D
Sbjct: 474 CGIDVSTIST----YIDSFRYGAPPHGGFGAGLERVVMLFCGLNNIRKTSLFPR-----D 524

Query: 571 LLMGSP 576
            L  +P
Sbjct: 525 PLRIAP 530


>gi|58267156|ref|XP_570734.1| asparagine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57226968|gb|AAW43427.1| asparagine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 600

 Score =  164 bits (415), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 73/356 (20%), Positives = 126/356 (35%), Gaps = 32/356 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
              VG  VRL GWVHR RP     F+ +RD  G  Q +   D      A  +  E  + +
Sbjct: 171 PELVGKRVRLQGWVHRFRPQKTNFFVVLRDGSGFLQCILTGDCIRTVDALDLSLECTIEV 230

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES--IRFKYRFL 131
            G+V              G +EL+    +I+  A      +    +      IR   R L
Sbjct: 231 VGIVEKVKEGQ----TAPGGVELAVDYWKIIGRAPTGAEALESRLQPDTEASIRADLRHL 286

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           +LR +     +  R  ++ + R         E + P +  +S EG            GS 
Sbjct: 287 ELRGEIASSVMRFRALLLRAFRESFNKRRITEVTPPCMVQTSVEGGSTLFEFDYY--GSK 344

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y + ++ S     + I   FR E   + R   E+  L+ E+ F++  D+L+
Sbjct: 345 AYLTQSSQLYLETVLPS-LGDVYCIQESFRAEKSLTRRHLSEYTHLEAELVFIKFKDLLD 403

Query: 252 TMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRR---YGTDKPDLR 294
            +E+++  V +                         F+R+ Y DAI     +G  + D  
Sbjct: 404 HLEDMICEVIDVLLADPVASEIIKTLNPEFVPPQRPFVRLDYRDAITYLNEHGIKREDGE 463

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
           + ++  ++ E               +N    +   P           D   ++  S
Sbjct: 464 DHVVGDDIAEAAER------KMTDQINKPIMLIHFPKSLKSFYMKSLDDAPDFTES 513



 Score = 48.1 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +R    E ++  +   GI      + +       + G   HGG   G++R++  +L   
Sbjct: 528 SMRISDLEELMAGYKREGIPA----DPYYWFTDQRKYGTTEHGGYGLGVERLLAWILKRY 583

Query: 555 NVREVSLFPM 564
            VRE SL+P 
Sbjct: 584 TVRECSLYPR 593


>gi|50409277|ref|XP_456856.1| DEHA2A12100p [Debaryomyces hansenii CBS767]
 gi|49652520|emb|CAG84831.1| DEHA2A12100p [Debaryomyces hansenii]
          Length = 562

 Score =  164 bits (415), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 74/345 (21%), Positives = 127/345 (36%), Gaps = 20/345 (5%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAKS 64
           +  DL  ++ G  V      H  R  G  + F+ +R    + Q  + AN +S   ++ K 
Sbjct: 102 NIKDLSAANDGEEVVFRARAHTSRQQGATMAFITLRQQDNLIQALIKANGESISKQMVKW 161

Query: 65  VRSEWVLCIDGLVMSRSAETINANIIT-GQIELSAQKIEILSVAEELPLPVFGEREYPE- 122
           V S  +  I  +              T    E+   KI  +    E    +  +    E 
Sbjct: 162 VGSINLESIVVVHGVVRKVEEEIKSATVQDAEVHVTKIYTIVETPEQLPVLIEDATRSEA 221

Query: 123 ------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                         R   R +DLR  T       +  +    R  +  + F E  TP + 
Sbjct: 222 EAEAAGLPVVNLDTRLDARVIDLRTPTNQAIFKIQAAVCQLFREFLSTKGFTEIHTPKII 281

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           A+  EG  +    S     ++ A  Q+PQ YKQ L+A+ F++ +++AP FR E+  + R 
Sbjct: 282 AAPSEGGSNVFEISYFKGKAYLA--QSPQLYKQQLIAADFEKVYEVAPVFRAENSNTHRH 339

Query: 231 PGEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             EF  LD+EM+F E  D +++ + ++   +F E  N  +     +R  Y     +   D
Sbjct: 340 MTEFTGLDLEMAFEEHYDEVIDVLSDLFVFIFTELKNRYSKEIATVRKQYPVEEFKLPED 399

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
              +R               E   F  + + N       +  K  
Sbjct: 400 GKMVRLHFKEGIAMLREAGKEVDDFEDLSTENEKLLGKLVREKYN 444



 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 44/118 (37%), Gaps = 10/118 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF             D     +  YD    G EI SG  R H   ++ +  + 
Sbjct: 452 KFPLAIRPFYTMPDS------EDPR--YSNSYDFFMRGEEILSGAQRIHDPVLLKERMNA 503

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             I   V          AF  G PPH G   G++R+VM  L  KN+R  SLFP     
Sbjct: 504 HEIDPSV--PGLDDYVDAFTYGCPPHAGGGIGLERVVMFFLDLKNIRRASLFPRDPRR 559


>gi|13357925|ref|NP_078199.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762151|ref|YP_001752448.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920120|ref|ZP_02931531.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508768|ref|ZP_02958236.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701862|ref|ZP_02971522.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|20139951|sp|Q9PQC6|SYN_UREPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|189083485|sp|B1AJ04|SYN_UREP2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|11271289|pir||A82901 asparaginyl-tRNA synthetase UU365 [imported] - Ureaplasma
           urealyticum
 gi|6899346|gb|AAF30774.1|AE002133_7 asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827728|gb|ACA32990.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902485|gb|EDT48774.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675705|gb|EDT87610.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701165|gb|EDU19447.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 454

 Score =  164 bits (415), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 97/264 (36%), Gaps = 15/264 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFEIAKSVRSEWVLCID 74
           G  +++  WV   R    I FL + D   +T + A         +E   + R    + I+
Sbjct: 18  GQKIQIKAWVRSNRDSKKIGFLVLNDGSSLTNLQAVYRVDKIDNYEEIAAARMWAAVVIE 77

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G++                +EL     +IL  ++E  L      +           L  R
Sbjct: 78  GVIKLTP-------TAKQPLELEVLNAQILKQSDEDFL--LSNNDLNLETLRLNAHLRPR 128

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +  H  +  R  +  ++   M    +   + P+ T +  EGA +     + +   F+  
Sbjct: 129 TNLFHAIMKVRATLAFAVHEFMNQNEYSWLAAPLFTGNDAEGAGETFSIQKFDNEEFFGK 188

Query: 195 PQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
                   Q +    A  F   +   P FR E   ++R   EF+ ++ EM+FV+   + +
Sbjct: 189 QTHLSVTGQLQAEAYAQAFGNVYTFGPTFRAEKSHTNRHLAEFWMIEPEMAFVDLKGMQD 248

Query: 252 TMENVLRGVFEEFSNGNTVSNNFL 275
            +E++++ V +     N     FL
Sbjct: 249 IVEDLVKHVIKAVLEKNQQELEFL 272



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  E+  G  R    E +L+    + +                + G     G   
Sbjct: 369 DLLIPGVGELVGGSQREDSYEKLLKRCQELKMPI----ESLQWYLDLRRFGYYMSSGFGI 424

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +R+VM + G  N+++   FP S
Sbjct: 425 GFERLVMYVTGVNNIKDTIPFPRS 448


>gi|198465182|ref|XP_002134927.1| GA23748 [Drosophila pseudoobscura pseudoobscura]
 gi|198150046|gb|EDY73554.1| GA23748 [Drosophila pseudoobscura pseudoobscura]
          Length = 707

 Score =  164 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 96/235 (40%), Gaps = 8/235 (3%)

Query: 18  GSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  + FL +RD  G  Q V          A  + +E  + + G+
Sbjct: 126 GVRVKIFGWVHRLRRQGKALMFLTLRDGTGFLQCVLTDLLCQTYQALVLSTESSVVLYGI 185

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           + +  +      I  G  EL     E++ +A           E    ++   R + +R +
Sbjct: 186 LKAVPSG----KIAPGGHELHVDYWELIGLAPPGGADAILNEEALPDVQLDNRHIMIRGE 241

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
              K +  R+ ++ + R       + E + P L  +  EG           + +F  L Q
Sbjct: 242 NTSKVLKMRSVVMQAFRDHYFDRGYNEVTPPTLVQTQVEGGSTLFKMQFFGEEAF--LTQ 299

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  DD+L+
Sbjct: 300 SSQLYLETCLP-ALGDVFTIAQSYRAEQSRTRRHLAEYTHVEAECPFISYDDLLD 353


>gi|170092641|ref|XP_001877542.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647401|gb|EDR11645.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 626

 Score =  164 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 56/265 (21%), Positives = 109/265 (41%), Gaps = 18/265 (6%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA-----NPDSACFEIAKSVRSEWVL 71
           G+   L+G +H +R  G  + F D+       Q++A     +         +  R   ++
Sbjct: 148 GTVEGLAGRIHNIRASGAKLKFYDLHGEGFKVQIMATQQDADEPEKFIASHEHFRRGDIV 207

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G           +   TG++ +    + IL       LP        +  R++ R+L
Sbjct: 208 GVVGT---------PSRSKTGELSICPSSM-ILLAPNLHQLPSSHFGLKDQETRYRKRYL 257

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL  +   +N+ K R+RI+N +R  +    F+E  TP+ +  +        +    +   
Sbjct: 258 DLILNETTRNLFKTRSRILNYVRRFLDNLGFMEVETPMTSMLAGGATAKPFITHHNDLNL 317

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  AP+ Y + L+  G DR ++I   FR+E       P EF   +  M++ + +D++
Sbjct: 318 DLYLRIAPELYLKQLVVGGLDRVYEIGRVFRNEGIDLTHNP-EFTICEFYMAYADMEDLM 376

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFL 275
           +  E +L G+    + G+T      
Sbjct: 377 DITEAMLEGLVVSLTGGSTKIIYHP 401



 Score = 77.8 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++    G E  +     +        F      KE  ++   G       A +
Sbjct: 509 RPGLCERFEGFMCGKEFCNAYTELNDPFEQRLRFEEQVRQKEQGDDEAQGIDETFIDALE 568

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+ P GG   GIDR+VM L  + N++EV LFP  +
Sbjct: 569 HGLAPTGGWGLGIDRLVMFLTDSTNIKEVLLFPAMK 604


>gi|134111763|ref|XP_775417.1| hypothetical protein CNBE1330 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258076|gb|EAL20770.1| hypothetical protein CNBE1330 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 600

 Score =  164 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 73/356 (20%), Positives = 126/356 (35%), Gaps = 32/356 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
              VG  VRL GWVHR RP     F+ +RD  G  Q +   D      A  +  E  + +
Sbjct: 171 PELVGKRVRLQGWVHRFRPQKTNFFVVLRDGSGFLQCILTGDCIRTVDALDLSLECTIEV 230

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES--IRFKYRFL 131
            G+V              G +EL+    +I+  A      +    +      IR   R L
Sbjct: 231 VGIVEKVKEGQ----TAPGGVELAVDYWKIIGRAPTGAEALESRLQPDTEASIRADLRHL 286

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           +LR +     +  R  ++ + R         E + P +  +S EG            GS 
Sbjct: 287 ELRGEIASSVMRFRALLLRAFRESFNKRRITEVTPPCMVQTSVEGGSTLFEFDYY--GSK 344

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y + ++ S     + I   FR E   + R   E+  L+ E+ F++  D+L+
Sbjct: 345 AYLTQSSQLYLETVLPS-LGDVYCIQESFRAEKSLTRRHLSEYTHLEAELVFIKFKDLLD 403

Query: 252 TMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRR---YGTDKPDLR 294
            +E+++  V +                         F+R+ Y DAI     +G  + D  
Sbjct: 404 HLEDMICEVIDVLLADPVASEIIKTLNPEFVPPQRPFVRLDYRDAITYLNEHGIKREDGE 463

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
           + ++  ++ E               +N    +   P           D   ++  S
Sbjct: 464 DHVVGDDIAEAAER------KMTDQINKPIMLIHFPKSLKSFYMKSLDDAPDFTES 513



 Score = 48.1 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +R    E ++  +   GI      + +       + G   HGG   G++R++  +L   
Sbjct: 528 SMRISDLEELMAGYKREGIPA----DPYYWFTDQRKYGTTEHGGYGLGVERLLAWILKRY 583

Query: 555 NVREVSLFPM 564
            VRE SL+P 
Sbjct: 584 TVRECSLYPR 593


>gi|89889413|ref|ZP_01200924.1| asparaginyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89517686|gb|EAS20342.1| asparaginyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 501

 Score =  164 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 52/286 (18%), Positives = 105/286 (36%), Gaps = 31/286 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEW 69
           L        + + GWV   R      F+ + D   I  +     PD+   ++   +    
Sbjct: 27  LQAEPSMQEITVKGWVRSFRNQR---FIALNDGSTIHNLQCVIEPDNHDEDLLDQINVAA 83

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFK 127
            + + G ++  +           ++EL A  I+IL  A  EE+   +   + +      +
Sbjct: 84  AVAVTGTLVESAGSG-------QRVELQATTIKILGTADREEVAKTILSPKRHKLETLRE 136

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
              L +R +T    +  R  +  ++        F +  TPI+T S  EGA +    S ++
Sbjct: 137 QAHLRVRTNTFGAVMRVRAALSFAVHKYFQENGFYQAHTPIITGSDAEGAGEMFRLSTLD 196

Query: 188 QG--------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                            F+   +      Q +    A G  + +   P FR E+  + R 
Sbjct: 197 PKNPPLDEEGNIDYKQDFFEKESNLTVSGQLEAETYAMGLGQVYTFGPTFRAENSNTSRH 256

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
             EF+ ++ E++F + D  ++  E+ ++ V +   +       FL 
Sbjct: 257 LAEFWMIEPEVAFNDLDANMDLSEDFIKSVVKYTIDNCKDDLEFLE 302



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 41/118 (34%), Gaps = 12/118 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKA-FQYDLVCNGF-EIASGGIRNHMSEVMLQAF 508
                   F M       L   D    +     D++  G  EI  G  R    +V+ +  
Sbjct: 389 DYPADIKAFYMR------LNDPDSEGRETVRAMDILFPGIGEIIGGSQREERYDVLKEKM 442

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             +GI     E          + G   H G   G +R+VM + G  N+R+V  +P + 
Sbjct: 443 DTMGIP----EEELWWYLETRKFGSVTHSGFGLGFERLVMFVTGMSNIRDVIPYPRTP 496


>gi|89897981|ref|YP_515091.1| lysyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|123749549|sp|Q255U2|SYK_CHLFF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|89331353|dbj|BAE80946.1| lysyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 526

 Score =  164 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 66/307 (21%), Positives = 124/307 (40%), Gaps = 24/307 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SACFEIAKSVRSEWVLCIDG 75
            V++SG +   R  G   F  I D+    QV+ N D    +   E A+    +++     
Sbjct: 66  KVKISGRMVLFRSMGKNAFAQILDNDQKIQVMFNRDFSSVAGLPEDAEITPIKFIEKKLD 125

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR- 134
           L      E       +G++ +  + + +L  A  + LP        +  R++ R+LDL  
Sbjct: 126 LGDILGIEGYLFFTHSGELTILVETVTLLGKAL-ISLPDKHAGLSDKETRYRKRWLDLIC 184

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYA 193
            D + +  +KR+RII  +R  M A++FIE  TPIL        A  F+          + 
Sbjct: 185 SDEVRQTFLKRSRIIKLIRQYMDAQDFIEVETPILQNIYGGAEATPFVTTLNALHSDMF- 243

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  + +   + ++  G  R ++I   FR+E       P EF  ++     ++   ++  +
Sbjct: 244 LRISLEIALKKILVGGTPRVYEIGKVFRNEGIDRTHNP-EFTMIEAYAMNIDYHSVMVYV 302

Query: 254 ENVLRGVFEEFSN---------------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           EN++  +  E +N                      ++R+   D+I+ YG    DL     
Sbjct: 303 ENLIEYLVGELNNGSTVLTYSHLKQGPQTIDFKAPWIRMTMKDSIKTYGGVDVDLHGDHE 362

Query: 299 MHNVTEH 305
           + N+ + 
Sbjct: 363 LRNILKE 369



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 42/129 (32%), Gaps = 18/129 (13%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKA-------FQYDLVCNGFEIASGGIRNHMSEV 503
           K+   H+           L+   L             +++  C G E+ +          
Sbjct: 398 KLIAPHHIT------DHPLETTPLCKSLRSGEEDYVERFESFCLGKELCNAYSELTDPMR 451

Query: 504 M-----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
                  Q                     A   GMPP GG   GIDR+VM+L  + ++R+
Sbjct: 452 QRMLLEKQMEKKALDPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMILTDSASIRD 511

Query: 559 VSLFPMSQN 567
           V  FP+ + 
Sbjct: 512 VLYFPVMRR 520


>gi|295136357|ref|YP_003587033.1| asparaginyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294984372|gb|ADF54837.1| asparaginyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 480

 Score =  164 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 105/279 (37%), Gaps = 31/279 (11%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSEWVLCIDGL 76
              ++SGWV   R +    F+ + D   I  +    D   F  E  K +     + + G+
Sbjct: 17  QEFKVSGWVRSFRSNR---FVALNDGSTINNIQCVIDFEKFNPETLKRITVGAAISVKGI 73

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLR 134
           +     +         ++E+  + + IL  A  EE+ L +   + +      +   L +R
Sbjct: 74  LKESEGKQ-------QRVEIDVKAVSILGDANPEEVKLTILSPKRHSLEKLREQAHLRVR 126

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN------- 187
            +T    +  R+++  ++       NF   +TPI+T S  EGA +    +  +       
Sbjct: 127 TNTFGAIMRVRSKLSFAVHSYFQQNNFYYVNTPIITGSDAEGAGEMFKVTNFDLKNPPKN 186

Query: 188 -------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                  +  F+          Q +    A G  + +   P FR E+  + R   EF+ +
Sbjct: 187 EDGSIDYKKDFFGKETNLTVSGQLEGETYALGLGQIYTFGPTFRAENSNTSRHLAEFWMI 246

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           + E++F + D  ++  E+ ++ V             FL 
Sbjct: 247 EPEIAFCDLDGNMDLAEDFIKYVVSYVLENCKDDLEFLE 285



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 14/121 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M           D  +++A   D++  G  EI  G  R    +V+ +  +
Sbjct: 372 DYPAKIKAFYMR-------LNEDGKTVRAM--DILFPGIGEIVGGSQREERLDVLKEKMA 422

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +GI ++ +           + G   H G   G +R+V  + G  N+R+V  FP +    
Sbjct: 423 ELGIEEKELW----WYLDTRKFGTCVHSGFGLGFERLVQFVTGMGNIRDVIPFPRTPQSA 478

Query: 570 D 570
           +
Sbjct: 479 E 479


>gi|300176814|emb|CBK25383.2| unnamed protein product [Blastocystis hominis]
          Length = 511

 Score =  164 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 98/297 (32%), Gaps = 35/297 (11%)

Query: 5   RTHSCGDL-GVSDVGSFVRLSGWVHRVRPHG--GIIFLDIRDHYGITQVVANPDS----A 57
           R   C +  G++ VG  + + GW   +R  G     F+ + D      +    DS     
Sbjct: 42  RDILCAEDHGLAYVGKSITIGGWTRTIRKQGGGKFAFVVLNDGSCFESMQCVLDSERVPN 101

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+ K+      L I G+++   A+          +EL A ++ +L   +    P+  +
Sbjct: 102 YEEVLKAGNVGVCLQIKGVLVKSPAKGQF-------VELHATEVVVLGSCDAKTFPLAKK 154

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           R   E +R     L  R +T+      R     +         F    TPI+T +  EGA
Sbjct: 155 RHTLEHLR-DIAHLRSRSNTIAAVARVRNSCAFATHLFFQQRGFKYIHTPIITGADCEGA 213

Query: 178 RDFLVPSRVNQG-----------------SFYALP---QAPQQYKQLLMASGFDRYFQIA 217
            +    + +                     F+          Q             +   
Sbjct: 214 GEMFTVTTMLDENIKDIPQTKEGKIDYSKDFFGKHVKMTVSGQLNVETYCCALCDVYTFG 273

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           P FR E+  S R   EF+ ++ EM+F +    +   E+ ++         N     F
Sbjct: 274 PTFRAENSHSVRHLAEFWMIEPEMAFCDLKMDMAVAEDYVKFCTAYVMEHNKDDLEF 330



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 4/87 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    E+  G  R    +V+ +    +G+     +          + G  PH G   G 
Sbjct: 428 LVPKIGELIGGSQREENLDVLEKRIEELGM----AKEGLEWYLDLRRYGSVPHSGFGLGF 483

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +R+VM + G +N+R+V  FP      D
Sbjct: 484 ERLVMFVTGMENIRDVIPFPRWPKNAD 510


>gi|170059943|ref|XP_001865582.1| aspartyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167878527|gb|EDS41910.1| aspartyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 550

 Score =  164 bits (414), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 60/287 (20%), Positives = 111/287 (38%), Gaps = 21/287 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G  + G  V++ GWVHR+R  G  ++F+ +RD  G  Q V          A  + +E  +
Sbjct: 122 GGENRGIRVKIYGWVHRLRRQGKGLMFVTLRDGTGFLQCVLTDARCQTYNAVVLSTESSV 181

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  EL     E++ +A           +    ++   R +
Sbjct: 182 RLFGTLKEVPEG----KTAPGGHELHVDYWELIGLAPAGGADTLLNEDANPDVQLDNRHI 237

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R  I+ + R       + E + P L  +  EG       +   + +F
Sbjct: 238 MIRGENTSKVLKMRDVIMQAFRAHYQDRGYTEVTPPTLVQTQVEGGSTLFKLNYFGEEAF 297

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ----- 246
             L Q+ Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+       
Sbjct: 298 --LTQSSQLYLETCIP-ALGDVFCIAQSYRAEQSRTRRHLAEYSHVEAECPFISFDDLLD 354

Query: 247 ---DDILNTMENVLR----GVFEEFS-NGNTVSNNFLRICYDDAIRR 285
              D +++T++ VL+     + +E +         F R+ Y +AI  
Sbjct: 355 RLEDLVVDTVDRVLKSPHGHLVQELNPGFVPPKRPFRRMNYSEAIVW 401



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   E L+  + + +      L+ N  EI  G +R+  +E +L  +  
Sbjct: 441 RFPAEIKSFYMAKC-PEDLRLTESVDV------LLPNVGEIVGGSMRSWDNEELLAGYKR 493

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI  +     +         G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 494 EGIDPKP----YYWYTDQRVYGTQPHGGYGLGLERFMCWLLNRYHIREVCLYPR 543


>gi|94984903|ref|YP_604267.1| aspartyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|94555184|gb|ABF45098.1| aspartyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 439

 Score =  164 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 22/255 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPDSACFEIAKSVRSEWVLC 72
               G  V+L G++H  R  GG+ FL +RD  GI   V A  D    E          + 
Sbjct: 18  PQHEGQTVKLQGFLHARRDLGGVQFLVLRDRSGIAQAVGAGLDLPLPE--------SSIE 69

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YPESIRFKYRF 130
           + G V +            G  E+  +++ +L+ A E P     + E          YR 
Sbjct: 70  VIGKVKAHPK-------APGGYEVQVERLRVLTPATEPPPVEIPKMEWNVNPETLLDYRV 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           + +R       +  +  ++ + R  + +E F E STP + ++  EG  +          +
Sbjct: 123 VTVRGLKERAVLKVQAELVAAFRDHLTSEGFTEISTPKIVSAGAEGGANLFPIDYFGHPA 182

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDI 249
           + A  Q+PQ YKQ +M   F+R F++AP +R E+  + R   E+  LD+EM F+E ++D+
Sbjct: 183 YLA--QSPQLYKQ-IMVGVFERVFEVAPVYRAEEHATSRHLNEYLSLDVEMGFIESEEDV 239

Query: 250 LNTMENVLRGVFEEF 264
           ++    VL  +    
Sbjct: 240 MDLETRVLAAMMTRL 254



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 56/144 (38%), Gaps = 19/144 (13%)

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                EF ++  +P             A   +T  +   +     D        +DL+  
Sbjct: 315 QEEGTEFVFVTKYP-----------RAARPFYTHAEINSDGSLNPD----ITRGFDLLFR 359

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G EI SGG R H   ++L + +   ++         G    F+ GMPPHGG A G +R+ 
Sbjct: 360 GIEITSGGQRIHEYSMLLDSIAQYRLNP----ESLAGYTEVFKYGMPPHGGFAIGAERLT 415

Query: 548 MLLLGAKNVREVSLFPMSQNFCDL 571
             LLG  NVR    FP  ++    
Sbjct: 416 AKLLGIANVRYARAFPRDRHRLTP 439


>gi|193787014|dbj|BAG51837.1| unnamed protein product [Homo sapiens]
          Length = 477

 Score =  164 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 111/258 (43%), Gaps = 19/258 (7%)

Query: 12  LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           LG  +  G  +++ GW+  VR    ++ L + D   +  +    DS     ++ +     
Sbjct: 34  LGAQNASGERIKIQGWIRSVRSQKEVLSLHVNDGSSLESLQVVADSGL--DSRELTFGSS 91

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++   ++  N       +EL A+KI+++   +    P+  +  +P     +Y  
Sbjct: 92  VEVQGQLIKSPSKRQN-------VELKAEKIKVIGNCDAKDFPIKYKERHPLEYLRQYPH 144

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-----R 185
              R + L   +  R+    ++        F+   TPI+T++  EGA +          +
Sbjct: 145 FRCRTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLK 204

Query: 186 VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           V + +F+   A      Q    +M+  F + F   P FR E+ ++ R   EFY ++ E+S
Sbjct: 205 VPEENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQNRRHLAEFYMIEAEIS 264

Query: 243 FVEQ-DDILNTMENVLRG 259
           FV+   D++  +E + + 
Sbjct: 265 FVDSLQDLMQVIEELFKA 282



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 27/157 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           AD R     E  ++        +++++P                PF M            
Sbjct: 345 ADLRTE--HEKYLVKHCGNIPVFVINYPL------------TLKPFYMRDNED------G 384

Query: 474 LLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                A   DL+  G  E+  GG+R      + +  +  G+++      +       + G
Sbjct: 385 PQHTVA-AVDLLVPGVGELFGGGLREERYHFLEERLARSGLTEV-----YQWYLDLRRFG 438

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             PHGG   G +R +  +LG  N+++V  FP   + C
Sbjct: 439 SVPHGGFGMGFERYLQCILGVDNIKDVIPFPRFPHSC 475


>gi|50306525|ref|XP_453236.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642370|emb|CAH00332.1| KLLA0D03839p [Kluyveromyces lactis]
          Length = 555

 Score =  164 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 77/344 (22%), Positives = 129/344 (37%), Gaps = 26/344 (7%)

Query: 11  DLGVS-DVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRS- 67
           DL  S D G  V     VH  R  G  + FL +R    + Q +   +       + V+  
Sbjct: 96  DLDESKDDGREVVFRARVHNSRQQGATLAFLTLRQQAELIQGLVKANKEGTVSKQMVKWV 155

Query: 68  -----EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
                E ++ + G+V        +A +    +E+   KI  +S   E    +  +    E
Sbjct: 156 GSINLESIVVVHGIVKKVEEPIKSATV--QNLEVHITKIYTISETPEQLPILIEDASRSE 213

Query: 123 -------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                          R   R +DLR  T       ++ +    R  +  + F E  TP L
Sbjct: 214 AEAEAAGLPVVNLDTRLDSRVIDLRTVTNQAIFRIQSGVCALFREFLTNKKFTEVHTPKL 273

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             +  EG  +    +     S+ A  Q+PQ YKQ L+A+ F+R F++AP FR E+  + R
Sbjct: 274 LGAPSEGGSNVFEVTYFKGKSYLA--QSPQLYKQQLIAADFERVFEVAPVFRAENSNTHR 331

Query: 230 LPGEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
              EF  LD+EM+F E  D +++T+  +   +F +           +R  Y     +   
Sbjct: 332 HMTEFTGLDLEMAFEEHYDEVVDTLAELFVFIFSQLKTRYAKEIALVRKQYPVEEFKLPK 391

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
           D   +R P             +   F  + + N       +  K
Sbjct: 392 DGKMVRIPFKEGIALLREAGKDVDDFEDLSTENEKLLGKLVRDK 435



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 10/118 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF             D     +  YD    G EI SG  R H ++++ +  + 
Sbjct: 445 KFPLAIRPFYTMPDA------EDPR--YSNSYDFFMRGEEILSGAQRIHDADLLKERMNA 496

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             +  E  +        AF  G PPH G   G++R+VM  L  KN+R  SLFP     
Sbjct: 497 HEVHPE--DPGLKDYCEAFTYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRDPKR 552


>gi|293401335|ref|ZP_06645479.1| asparagine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305461|gb|EFE46706.1| asparagine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 461

 Score =  164 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 99/276 (35%), Gaps = 22/276 (7%)

Query: 12  LGVSDVG----SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSV 65
           L  S V      +V+L GW+   R  G + F+++ D       Q+V   +   F   +  
Sbjct: 15  LSASHVELDSLEYVQLQGWIRTNRCSGKLGFIELNDGTYFRNAQLVYMQELKNFAEVEKY 74

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   + + G +                 E+   +  +    +        ++ +     
Sbjct: 75  PTGAAITVTGKLKLTPDGKQP-------FEIVVTEAVLEGDCDRDYPLQ--KKRHSFEYM 125

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            +   L  R ++ +     R+ +  ++      + F+   TP++T +  EGA +    + 
Sbjct: 126 REIPHLRPRANSFYAIFRLRSVLSMAIHEFFQNQGFVYVHTPVITGNDAEGAGETFTVTT 185

Query: 186 ----VNQGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                 +  F+    +     Q      A  F   +   P FR E+  + R   EF+ ++
Sbjct: 186 REDQKYEEDFFGKHASLTVSGQLHVESFAMAFRDVYTFGPTFRAENSNTTRHASEFWMIE 245

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
            E++F + +D ++ +E++++   +           F
Sbjct: 246 PEIAFADLEDDMDLIEDMVKYCIDYVLENAPEEMKF 281



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 20/152 (13%)

Query: 418 NHIAQELGIINCNCFEFC-WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           N I   + + + +    C  +++ P +  +            F M               
Sbjct: 324 NKIEWGMDLQSEHERYLCEKVVNGPVFLID-----YPKDIKAFYMRVNEDNKTVA----- 373

Query: 477 IKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
                 DL+  G  E+  G  R    +V+      +G+  + ++          + G   
Sbjct: 374 ----ACDLLVPGVGELVGGSQREERYDVLEARMKEMGMETDSLQ----WYMDLRRYGGCK 425

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           H G   G DR++M L G +N+R+V  FP +  
Sbjct: 426 HAGFGLGFDRMLMYLTGMQNIRDVEPFPRTPR 457


>gi|72389957|ref|XP_845273.1| lysyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62359254|gb|AAX79696.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70801808|gb|AAZ11714.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 634

 Score =  164 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 64/336 (19%), Positives = 140/336 (41%), Gaps = 18/336 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAKSVRSEWVLCIDGLVMSR 80
           R++G +  +R  G ++F  +R      Q+V +  +    +  K +R+   L +  +V   
Sbjct: 89  RVAGRITSLRDMGKMLFATVRSSGVDLQLVVHVGEHFTRDCLKQLRA--SLRVGDIV--- 143

Query: 81  SAETINANIITGQIELSAQKIEILS---VAEELPLPVF--GEREYPESIRFKYRFLDLRR 135
            AE I   +  G++ L+A ++E+L+     +++  P      +     +R++YRF+D+  
Sbjct: 144 GAEGIPCRMQRGELSLAASRVEVLAPYVCRDQVVCPDLRGFTQLQDNDVRYRYRFVDMMT 203

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYA 193
           +    + ++ R  ++ S+R  +   +F+E  TPIL T +S   A+ F+     N    + 
Sbjct: 204 NRSVIDTIRKRHTVLQSLREYLDMRHFVEVETPILHTVASGANAKPFVTHHNANNADLF- 262

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y +  +  G +R ++I   FR+ED      P EF   +   ++   +D++   
Sbjct: 263 LRVAPELYLKQCVVGGLERVYEIGKVFRNEDADRSHNP-EFTTCEFYAAYHTYEDLITMT 321

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT--EHFVHSEF 311
           E++ R +    +    +     R      I   G     +     + + +  E    +E 
Sbjct: 322 EDIFRHLALRANGTTQLQIQCERAGITREID-LGATFRRISVYDEIQSASGVELPPPNEL 380

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
                +  ++       I            D++ ++
Sbjct: 381 NTPKGLAYMSAIMLRHDIQFPAVRTAAKMFDKLIDF 416



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 8/111 (7%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +P  M     E           A +++L  NG E  +     +  +     F    I ++
Sbjct: 431 HPIFMSPLAKEH----SSRPGLAERFELFINGIEYCNAYSELNDPQEQCHRFQQQLIDRQ 486

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             +           ++ Q G+PP  G   GIDR+VMLL G+  +R+  +FP
Sbjct: 487 GGDEEAMPLDETFLKSLQVGLPPTAGWGMGIDRVVMLLSGSSTIRDGIIFP 537


>gi|28572907|ref|NP_789687.1| aspartyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|28411040|emb|CAD67425.1| aspartyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 432

 Score =  164 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 69/290 (23%), Positives = 121/290 (41%), Gaps = 22/290 (7%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
              L        V++ GWV  VR    I F+ IRD  G    +    S   +        
Sbjct: 6   IAHLSQYQSSQAVQVRGWVEAVRDQKNIQFVIIRDESGAPLQLLYVRSGKSDCIAE--KI 63

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             L I   V +      N  +    +E+    ++++S A   P+      +     R  +
Sbjct: 64  SSLSIGSFVRASGVLKHNERVKLRGLEVEINNLDVVSTALPSPIAH----DSSIDKRLDW 119

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           RFLDLR +  +     +T  ++++R   +   FIE +TP L ASS E   +       ++
Sbjct: 120 RFLDLRNERNNLIFRIQTCFLHALRTWWVRNGFIEINTPKLMASSSESRAELFSLKYFDR 179

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QD 247
             + A  Q+PQ +KQ+  A+GF + F+IAP +R +   + R   E+  +D E+S++E  +
Sbjct: 180 IGYLA--QSPQFFKQMSQAAGFGKVFEIAPVYRADPSFTSRHATEYTSIDSELSWIESHE 237

Query: 248 DILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAIR 284
           D++N  E +L     +               N       F+R+  + A+ 
Sbjct: 238 DVMNMQEELLTYSICDVLERHSEEIRGVFGLNLCPPKRPFVRVTLEQALN 287



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 26/132 (19%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           ++ +  +F ++ ++P             +  PF   +                  YDL+ 
Sbjct: 314 LDNHASDFVFVTNYP------------VSVRPFYHMRE----------NENITKSYDLLF 351

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
            G EIA+G  R H  +V++      G+         G     F+ GMPPHGG  AG+ RI
Sbjct: 352 RGIEIATGAQREHRYDVLVDQAREKGLDLSE----LGYYLDFFRYGMPPHGGFGAGLARI 407

Query: 547 VMLLLGAKNVRE 558
           +M LL   +++E
Sbjct: 408 IMALLRLGSIKE 419


>gi|297744376|emb|CBI37350.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  164 bits (414), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 115/356 (32%), Gaps = 59/356 (16%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSE 68
           D G+  +G  + + GWV  +R    +IF+++ D   ++ +    N D+  ++  +S    
Sbjct: 119 DEGLDRLGQTLAVKGWVRTLRVQSSVIFIEVNDGSCLSNMQCVMNSDADGYDQVESGS-- 176

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
                 G  +S     + +     ++EL   KI  +  ++        ++          
Sbjct: 177 ---ITTGASVSIQGTLVASQGSKQKVELKVLKIVTVGKSDPSFPIQ--KKRVSREFLRTK 231

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R +T       R  +  +         F+  S+PI+TAS  EGA +    + +  
Sbjct: 232 AHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWISSPIITASDCEGAGEQFCVTTLIP 291

Query: 189 ------------------------GSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFR 221
                                     F+  P       Q      A+     +   P FR
Sbjct: 292 SSREATDSTVDAIPKAKDGLIDWSQDFFGKPAFLTVSGQLNAETYATALSDVYTFGPTFR 351

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG-------------- 267
            E+  + R   EF+ ++ E++F + +D +      L+ V                     
Sbjct: 352 AENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYVVTYILENCKEDMEFFNTWIEK 411

Query: 268 -------NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVF 314
                  +    NF+++ Y DA+            P+       +EH  +     F
Sbjct: 412 GIINRLSDVAEKNFVQLTYTDAVELLLRANKKFEFPVKWGCDLQSEHERYITEVAF 467



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 4/102 (3%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    LV    E+  G  R       L+         ++ ++ +      
Sbjct: 486 MRRNDDGKTVAAMDMLVPRVGELIGGSQREER----LEYLEERLDDLKLSKDSYWWYLDL 541

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            + G  PH G   G +R+V    G  N+R+   FP +    +
Sbjct: 542 RRYGSVPHAGFGLGFERLVQFATGIDNIRDAIPFPRTPGSAE 583


>gi|145519962|ref|XP_001445842.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413308|emb|CAK78445.1| unnamed protein product [Paramecium tetraurelia]
          Length = 557

 Score =  163 bits (413), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 99/309 (32%), Gaps = 34/309 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
           G S +G  V ++GW   VR    + F+++ D       Q+V +     F         + 
Sbjct: 95  GDSYIGQTVTIAGWAKTVRAQKNLCFVELNDGTSFAGLQIVISEKIKNFADIIKTNVGFS 154

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQ-----KIEILSVAEELPLPVFGEREYPESIR 125
           L + G V+   A+          IE+        ++ I+  A+    P+    + PE++R
Sbjct: 155 LKMTGSVVQSPAKGQL-------IEMLVDDNLKHEVIIVGCADPQEYPMAKGTQKPETLR 207

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            K   L  R +        R  +  +          +   TP++T S  EGA D    + 
Sbjct: 208 QK-AHLRPRSNFFGAVTRIRNNLAYATHVFFQNNGCLYIHTPVITGSDCEGAGDMFKVTT 266

Query: 186 VNQGSFYALPQ-------------------APQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +       +PQ                      Q +           +   P FR E   
Sbjct: 267 IFDNDLQKVPQLNGKVDVTQDFFKKETKLTVSGQLQVENFCVSMSNVYTFGPTFRAEKAH 326

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           + R   EF+ ++ E +F +  D +   E  ++         N     FL       +  Y
Sbjct: 327 THRHLAEFWMIEPEFAFADLFDNMEAAEGYVKFCINYILANNYDDLEFLNKRVKQGLIDY 386

Query: 287 GTDKPDLRN 295
             D      
Sbjct: 387 LKDIVSKEF 395



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 77/258 (29%), Gaps = 47/258 (18%)

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
           +F  + +     +                D +    +   Q  + Y+   + +       
Sbjct: 346 LFDNMEAAEGYVKFCINYILANNY-----DDLEFLNKRVKQGLIDYLKDIVSKE------ 394

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
                 +    T+ I + L+ Q      F            ++    +A+++        
Sbjct: 395 -----FIKCSYTQGIEILLNAQQA-GAKFENSKIEWGMDLNSEHERFLAEKVFQ------ 442

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              +I D+P     +E K        F M                      LV    E+ 
Sbjct: 443 RPVFIYDYP-----KEIK-------AFYMKVAED--------GKCVRAMDMLVPQVGELI 482

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+ Q  +  G+        +       + G  PH G   G +R+VM++ G
Sbjct: 483 GGSQREERYDVLAQRITECGLKL----EVYRPYLDLRRYGTVPHSGFGLGFERLVMMITG 538

Query: 553 AKNVREVSLFPMSQNFCD 570
            +N+R+V  FP      D
Sbjct: 539 VENIRDVIPFPRYHGSAD 556


>gi|126466260|ref|YP_001041369.1| asparaginyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126015083|gb|ABN70461.1| asparaginyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 436

 Score =  163 bits (413), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 60/305 (19%), Positives = 122/305 (40%), Gaps = 11/305 (3%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H    L    +G  V + GW++R    GG  F+ +R   GI QVV + +    EI + ++
Sbjct: 9   HIEDVLSDDFIGKKVCVRGWIYRRSVVGGKAFVRVRGSTGIIQVVVDREKCGEEIVRILK 68

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +       +    E +      G  E+ A    I+  + + P+    +         
Sbjct: 69  DIGLEA----SVMTCGELVKQPRAPGGYEVHADWFRIVGYSRDFPI----KGGEGIDYLL 120

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L +R   L + +  +  ++ + R   +  ++ E + PILTAS+ EG          
Sbjct: 121 DNRHLWIRSRKLTEIMKIKHSVLKAGREYFVENDWWEVTPPILTASAVEGGATLFPVKYF 180

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           ++ ++  L Q+ Q Y + L+ S  ++ + +   FR E  R+ R   E++ L+ E ++   
Sbjct: 181 DKTAY--LSQSAQLYLEALIYS-LEKVWSLTTSFRAEKSRTRRHLAEYWHLEAEAAWYNM 237

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           +D++   E ++  + +     N      L               P +R    +  + +  
Sbjct: 238 EDMMRVAEELVAYIVQYILEHNKRQLEILGRDLKILKNSVEPPYPRIRYDEAIEILQKKG 297

Query: 307 VHSEF 311
           V+ E+
Sbjct: 298 VNIEW 302



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 50/154 (32%), Gaps = 31/154 (20%)

Query: 418 NHIAQELGIINCNCF-----EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
                +LG            +  +I  FP     +E K      +P        E L   
Sbjct: 300 IEWGDDLGADEERVLTMEFDKPFFITHFP-----KEIKSFYMKLDP------ENEKL--- 345

Query: 473 DLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
                 A  +DL+      EI  G  R      +L      G   E  +          +
Sbjct: 346 ------ALGFDLLAPEGYGEIIGGSEREDDYNKLLNRIIEQGYDPEDYK----WYLDLRK 395

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            G  PH G   GI+R+VM + G  ++R+ + FP 
Sbjct: 396 YGSVPHSGFGLGIERLVMWIAGLDHIRDATPFPR 429


>gi|28493721|ref|NP_787882.1| aspartyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|28476763|gb|AAO44851.1| aspartyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 446

 Score =  163 bits (413), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 69/290 (23%), Positives = 121/290 (41%), Gaps = 22/290 (7%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
              L        V++ GWV  VR    I F+ IRD  G    +    S   +        
Sbjct: 20  IAHLSQYQSSQAVQVRGWVEAVRDQKNIQFVIIRDESGAPLQLLYVRSGKSDCIAE--KI 77

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             L I   V +      N  +    +E+    ++++S A   P+      +     R  +
Sbjct: 78  SSLSIGSFVRASGVLKHNERVKLRGLEVEINNLDVVSTALPSPIAH----DSSIDKRLDW 133

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           RFLDLR +  +     +T  ++++R   +   FIE +TP L ASS E   +       ++
Sbjct: 134 RFLDLRNERNNLIFRIQTYFLHALRTWWVRNGFIEINTPKLMASSSESRAELFSLKYFDR 193

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QD 247
             + A  Q+PQ +KQ+  A+GF + F+IAP +R +   + R   E+  +D E+S++E  +
Sbjct: 194 IGYLA--QSPQFFKQMSQAAGFGKVFEIAPVYRADPSFTSRHATEYTSIDSELSWIESHE 251

Query: 248 DILNTMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAIR 284
           D++N  E +L     +               N       F+R+  + A+ 
Sbjct: 252 DVMNMQEELLTYSICDVLERHSEEIRGVFGLNLCPPKRPFVRVTLEQALN 301



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 26/132 (19%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           ++ +  +F ++ ++P             +  PF   +                  YDL+ 
Sbjct: 328 LDNHASDFVFVTNYP------------VSVRPFYHMRE----------NENITKSYDLLF 365

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
            G EIA+G  R H  +V++      G+         G     F+ GMPPHGG  AG+ RI
Sbjct: 366 RGIEIATGAQREHRYDVLVDQAREKGLDLSE----LGYYLDFFRYGMPPHGGFGAGLARI 421

Query: 547 VMLLLGAKNVRE 558
           +M LL   +++E
Sbjct: 422 IMALLRLGSIKE 433


>gi|302308063|ref|NP_984841.2| AEL020Wp [Ashbya gossypii ATCC 10895]
 gi|299789278|gb|AAS52665.2| AEL020Wp [Ashbya gossypii ATCC 10895]
          Length = 551

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 67/307 (21%), Positives = 114/307 (37%), Gaps = 26/307 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG+ V++SGW+HR+R    ++FL +RD  G  Q V + D A      ++  E  + + G 
Sbjct: 125 VGTRVKVSGWIHRLRMGKAVVFLVLRDGTGYLQAVLSKDLARAYQTSTLTLESTVTLYGT 184

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YPESIRFKYRFLDLR 134
           V              G +EL     EI+S+A           +     S+    R L LR
Sbjct: 185 VKQLPEG----KTAPGGVELDVDYYEIVSLAPSGDDSFSNRVQEGADPSLLMDMRHLMLR 240

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            ++L   +  R   + ++R     E  +E + P +  +  EG           + +F  L
Sbjct: 241 GESLSAVMKVRAAFLRAIRRVYEDEGLLEVTPPCMVQTQVEGGSTLFKLDYYGEEAF--L 298

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y +  +       F I   FR E   + R   E+  ++ E+ FV+ D +L   E
Sbjct: 299 TQSSQLYLETCLP-ALGDVFCIQESFRAEKSHTRRHLSEYTHIEAELGFVDFDQLLRHTE 357

Query: 255 NVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            V+  +                   +       F+R+ Y DAI                 
Sbjct: 358 RVITSLVRYVLEDPVAGPLVKQLNPDFVPPQMPFMRLEYKDAITWLNEHGIKNEEGEEFK 417

Query: 301 ---NVTE 304
              ++ E
Sbjct: 418 FGDDIAE 424



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 71/209 (33%), Gaps = 41/209 (19%)

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIA--------GDPLKFCS-FAADARNHIAQE 423
           GP+ K LN          + ++  D+  ++         G+  KF    A  A   +   
Sbjct: 374 GPLVKQLNPDFVPPQMPFMRLEYKDAITWLNEHGIKNEEGEEFKFGDDIAEAAERKMTDT 433

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           +G       +  ++  FP    +            F M +         D    ++  +D
Sbjct: 434 IG-------KPIFLTRFPLELKS------------FYMKRCAD------DPRVTES--FD 466

Query: 484 -LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
            L+    E+  G +R    + ++  F   G++       +       + G  PHGG   G
Sbjct: 467 VLMPTVGEVTGGSMRIDSLDELMAGFKREGVNP----EPYYWFSDQRRYGSCPHGGYGLG 522

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            +RI+  L     VR+ SL+P     C  
Sbjct: 523 TERILAWLCNRYTVRDCSLYPRYTGRCKP 551


>gi|119497261|ref|XP_001265391.1| aspartyl-tRNA synthetase, cytoplasmic [Neosartorya fischeri NRRL
           181]
 gi|119413553|gb|EAW23494.1| aspartyl-tRNA synthetase, cytoplasmic [Neosartorya fischeri NRRL
           181]
          Length = 948

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 72/366 (19%), Positives = 139/366 (37%), Gaps = 29/366 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIA-----KS 64
           D+  S VG  +  +  +H +R     ++FL  R      Q V +       IA     + 
Sbjct: 133 DISSSSVGQEIFFTARLHIIRRMSSKLVFLIFRQRLTTFQGVLHEKPGAKSIAMIQWAEH 192

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL---------SVAEELPLPVF 115
           +R   ++ + G+V +     +   I    +EL  ++I ++         SV E       
Sbjct: 193 LRLGSIVRVRGIVQAPQVPVLGCTIH--DVELDVEQIHLVVHREEPVPFSVYEAEIRTAE 250

Query: 116 GER------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
            +R        P+  R   R LDLR  T       ++ + N  R  +  + FIE  TP L
Sbjct: 251 EDRVEGRRSHLPDRTRLNNRILDLRTPTSQSIFRLQSALCNIFRSSLDEQGFIEIHTPKL 310

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             ++ E        +   + +F A  Q+PQ  KQ+ +A+ F+R ++I   FR E+  + R
Sbjct: 311 QGTATESGASVFQVNYFGRDAFLA--QSPQLAKQMAIAADFERVYEIGAVFRAENSNTHR 368

Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
              E+  LD+EM+  E   ++L+ ++ V++ + +            ++  +      +  
Sbjct: 369 HLTEYTGLDIEMAIEEHYHEMLDVLDAVIKNMLKGVYGRYRREIEIVKHQFPSEDVVWLE 428

Query: 289 DKPDLRNPIIMHNVTE---HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
           + P +R    +  + E                L       +  +  +  G +    D+  
Sbjct: 429 ETPIIRFSDGIKMLNESGWRDEDGNPLPEDDDLHTRDEIRLGELVKEKYGTDYYILDKFP 488

Query: 346 EWARSQ 351
             AR  
Sbjct: 489 VAARPF 494



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF TMP         +         +D+   G EI SGG R H   ++ ++  
Sbjct: 486 KFPVAARPFYTMPDPEDPRFTNS---------FDIFIRGQEIVSGGQRIHDPRMLEESMR 536

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             GI+ +++E+        F+ G PPH G   G++R++MLLL   N+R  SLF       
Sbjct: 537 RSGINPDMMED----YLEGFRWGAPPHAGAGVGLERLLMLLLKLGNIRLASLFHRDPKSF 592

Query: 570 DL 571
             
Sbjct: 593 PP 594


>gi|240146778|ref|ZP_04745379.1| aspartate--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257201063|gb|EEU99347.1| aspartate--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 443

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 70/311 (22%), Positives = 120/311 (38%), Gaps = 20/311 (6%)

Query: 1   MHRYRTHSCGDL-GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           +++  T   GDL   S  G  V+++G VH +R  G + F+ +R   G+ Q V       F
Sbjct: 7   VNKKETLEIGDLLTGSYEGKSVKVNGAVHTIRDMGEVAFIVLRKREGLLQCVYEEGKTQF 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV--AEELPLPVFGE 117
           ++ K ++    + ++G V                 E+   KI++LS   A         +
Sbjct: 67  DL-KDLKEAATIEVEGTV-------KPEERAPHGFEIRLDKIKVLSEPAAPMPLAISKWK 118

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                      R + LR          +  ++   R  + ++ F E  TP + A S EG 
Sbjct: 119 LNTSLEANLNNRAIALRNIRERAKFRIQEGVVRGFRDFLYSQGFTEIHTPKIGAKSAEGG 178

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +       ++ +   L Q+PQ YKQ +M   FDR F+ AP FR E   + R   E+  L
Sbjct: 179 ANLFRLEYFHRPA--VLQQSPQFYKQ-MMVGVFDRVFETAPVFRAEKHNTKRHLNEYTSL 235

Query: 238 DMEMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           D EM +++  +DI+      L+ +              L +   +         P +R  
Sbjct: 236 DFEMGYIDGFEDIMAMETGFLQYMIALLKKDYAEELRLLGVTLPNV-----DKIPTVRFD 290

Query: 297 IIMHNVTEHFV 307
                V E + 
Sbjct: 291 EAKEKVAEKYH 301



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF            +         +DL+  G EI 
Sbjct: 329 DFVFVTHYP------------SKKRPFYAM--------DDPADPTYTLSFDLLYQGLEIT 368

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H    +++     G+  E +E         F+ GMPPHGG+  G++R+ M L+G
Sbjct: 369 TGGQRIHDYNKLMEKIEKRGMESEGMEQ----YLSVFKHGMPPHGGLGIGLERLTMKLVG 424

Query: 553 AKNVREVSLFPMSQNFCDL 571
             NVRE +LFP   +  + 
Sbjct: 425 EDNVRETTLFPRDLSRLEP 443


>gi|291536653|emb|CBL09765.1| aspartyl-tRNA synthetase, archaeal type [Roseburia intestinalis
           M50/1]
          Length = 443

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 70/311 (22%), Positives = 120/311 (38%), Gaps = 20/311 (6%)

Query: 1   MHRYRTHSCGDL-GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           +++  T   GDL   S  G  V+++G VH +R  G + F+ +R   G+ Q V       F
Sbjct: 7   VNKKETLEIGDLLTGSYEGKSVKVNGAVHTIRDMGEVAFIVLRKREGLLQCVYEEGKTQF 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV--AEELPLPVFGE 117
           ++ K ++    + ++G V                 E+   KI++LS   A         +
Sbjct: 67  DL-KDLKEAATIEVEGTV-------KPEERAPRGFEIRLDKIKVLSEPAAPMPLAISKWK 118

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                      R + LR          +  ++   R  + ++ F E  TP + A S EG 
Sbjct: 119 LNTSLEANLNNRAIALRNVRERAKFRIQEGVVRGFRDFLYSQGFTEIHTPKIGAKSAEGG 178

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +       ++ +   L Q+PQ YKQ +M   FDR F+ AP FR E   + R   E+  L
Sbjct: 179 ANLFRLEYFHRPA--VLQQSPQFYKQ-MMVGVFDRVFETAPVFRAEKHNTKRHLNEYTSL 235

Query: 238 DMEMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           D EM +++  +DI+      L+ +              L +   +         P +R  
Sbjct: 236 DFEMGYIDGFEDIMAMETGFLQYMIALLKKDYAEELRLLGVTLPNV-----DKIPTVRFD 290

Query: 297 IIMHNVTEHFV 307
                V E + 
Sbjct: 291 EAKEKVAEKYH 301



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF            +         +DL+  G EI 
Sbjct: 329 DFVFVTHYP------------SKKRPFYAM--------DDPADPTYTLSFDLLYQGLEIT 368

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H    +++     G+  E +E         F+ GMPPHGG+  G++R+ M L+G
Sbjct: 369 TGGQRIHDYNKLMEKIEKRGMESEGMEQ----YLSVFKHGMPPHGGLGIGLERLTMKLVG 424

Query: 553 AKNVREVSLFPMSQNFCDL 571
             NVRE +LFP   +  + 
Sbjct: 425 EDNVRETTLFPRDLSRLEP 443


>gi|219126452|ref|XP_002183471.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405227|gb|EEC45171.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 467

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 54/290 (18%), Positives = 110/290 (37%), Gaps = 29/290 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + GWV  VR    + F+++ D   ++ +         ++ ++ ++E      G  +  
Sbjct: 5   VSIKGWVRTVRKQKTLAFVEVNDGSNLSGIQCVI--VFDKVDEATKAELDKVTTGCAVEL 62

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           +   + +      +EL+A  + ++        P+  +R   E +R     L  R +T+  
Sbjct: 63  TGPLVASQGGKQAVELAATVLRVVGACPAETYPLAKKRHTLEYLR-SIAHLRPRTNTIAA 121

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----------- 189
               R+ +  ++      + F+   TP++TAS  EGA +    + +N             
Sbjct: 122 VARVRSHLAGAIHAFFQTQGFVYVQTPLVTASDCEGAGELFRVTTLNLDSVSTLPKAKNE 181

Query: 190 ------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q      A      +   P FR E+ ++ R   EF
Sbjct: 182 NGKEQDRVDYSEDFFGKPAYLTVSGQLGGETHACALGDIYTFGPTFRAENSQTSRHLAEF 241

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
           + ++ EM+F +    +N  EN+L+ V +   +       F +  YD A+ 
Sbjct: 242 HMVEPEMAFADLTSAMNNAENMLKYVVQHVLDSCGEDLEFFQKFYDKALM 291



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 45/123 (36%), Gaps = 12/123 (9%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMS 501
           +E          A   F M     +  +            DL+  G  E+  G  R    
Sbjct: 349 FESAVFVYNYPKAIKAFYMRDNEEDGGET-------VNAMDLLVPGVGELIGGSQREERL 401

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           +V+ Q  ++VG+ K      +       + G  PH G   G +R+V  + G +N+RE   
Sbjct: 402 DVLEQKIADVGLDK----EDYWWYLDLRRFGSVPHAGYGLGFERLVTYVCGIENIREAIA 457

Query: 562 FPM 564
           FP 
Sbjct: 458 FPR 460


>gi|156934577|ref|YP_001438493.1| asparaginyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|156532831|gb|ABU77657.1| hypothetical protein ESA_02411 [Cronobacter sakazakii ATCC BAA-894]
          Length = 441

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 121/379 (31%), Gaps = 58/379 (15%)

Query: 27  VHRVRPHG-GIIFLDIRDHYGITQVVANPDS----ACFEIAKSVRSEWVLCIDGLVMSRS 81
           +   R    GI FL + D      + A  ++       E+        V+ + G V+   
Sbjct: 1   MRTRRDSKAGISFLAVYDGSCFDPIQAVINNSLPNYNEEVLHLTTGCSVI-VTGKVVESP 59

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            E  +        EL A ++E+    ++        + +      +   L  R + +   
Sbjct: 60  GEGQS-------FELQATQVEVTGWVDDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAV 112

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------------- 187
              R  +  ++      + F   STP++TAS  EGA +    S ++              
Sbjct: 113 ARVRHTLAQALHRFFHEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRDAQGKIDF 172

Query: 188 QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              F+   A      Q      A    + +   P FR E+  + R   EF+ L+ E++F 
Sbjct: 173 DKDFFGKEAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNTSRHLAEFWMLEPEVAFA 232

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RICYDDAI 283
             +D+    E +L+ VF+   +       F                      ++ Y DA+
Sbjct: 233 NLNDVAGLAEAMLKYVFKAVLDERMDDMKFFAERVDKEAIERLERFISADFAQVDYTDAV 292

Query: 284 RRYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
                      NP+    ++ +EH  +   + F   + V    +            R   
Sbjct: 293 AILEKCGEKFENPVYWGVDLASEHERYLAEKHFKAPVVVKNYPKDI-----KAFYMRLNE 347

Query: 342 DRMNEWARSQGQPGLAYIF 360
           D     A     PG+  I 
Sbjct: 348 DGKTVAAMDVLAPGIGEII 366



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      +G++K      +      
Sbjct: 345 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMDEMGLNK----EDYWWYRDL 398

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 399 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 437


>gi|300776373|ref|ZP_07086231.1| asparagine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300501883|gb|EFK33023.1| asparagine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 482

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 102/276 (36%), Gaps = 31/276 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA--KSVRSEWVLCIDGLVM 78
           + + GWV   R +    F+ + D   I  +    D   F+ A  K++ +   L + G V+
Sbjct: 21  ITVYGWVRSFRANR---FIALNDGSTINNLQIVVDFENFDEAIIKNISTASSLKVVGEVV 77

Query: 79  SRSAETINANIITGQIELSAQKIEIL--SVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                  +       +E+ A+KI IL  +  EEL   +   +++      +   L  R +
Sbjct: 78  ESQGAGQS-------VEIIAKKIIILGDNFTEELQSTILQPKKHSLEKLREQAHLRFRTN 130

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL-- 194
                   R  +  ++        F   +TP++T +  EGA +    +  +  +      
Sbjct: 131 LFGAVFRVRHAVSFAVHSFFNQNQFFYINTPVITGADAEGAGEMFGVTNFDLNNMPRTEE 190

Query: 195 ---------------PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                               Q +    A G  R +   P FR E+  + R   EF+ ++ 
Sbjct: 191 GEIDFAQDFFGRKTNLTVSGQLEGETAAMGLGRIYTFGPTFRAENSNTTRHLAEFWMIEP 250

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           E++F   +D ++  E+ L+ V +   +       FL
Sbjct: 251 EVAFNNLEDNIDLAEDFLKYVIQYVLDNCKDDLEFL 286



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 5/123 (4%)

Query: 449 EKKIDFAHNPFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
           EK  +     F  P+      +K ND     A    L     EI  G  R    +V+ Q 
Sbjct: 363 EKHFESPVVLFDYPKEIKAFYMKLNDDNKTVAAMDVLFPGIGEIIGGSEREARLDVLKQK 422

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             ++ + +  +           + G  PH G   G++R+V+ + G  N+R+V  FP +  
Sbjct: 423 MVDMHVDEHELW----WYLDTRKFGSVPHAGFGLGLERLVLFVTGMTNIRDVIPFPRTPK 478

Query: 568 FCD 570
             +
Sbjct: 479 SAE 481


>gi|261328660|emb|CBH11638.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 634

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 64/336 (19%), Positives = 140/336 (41%), Gaps = 18/336 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAKSVRSEWVLCIDGLVMSR 80
           R++G +  +R  G ++F  +R      Q+V +  +    +  K +R+   L +  +V   
Sbjct: 89  RVAGRITSLRDMGKMLFATVRSSGVDLQLVVHVGEHFTRDCLKQLRA--SLRVGDIV--- 143

Query: 81  SAETINANIITGQIELSAQKIEILS---VAEELPLPVF--GEREYPESIRFKYRFLDLRR 135
            AE I   +  G++ L+A ++E+L+     +++  P      +     +R++YRF+D+  
Sbjct: 144 GAEGIPCRMQRGELSLAASRVEVLAPYVCRDQVVCPDLRGFTQLQDNDVRYRYRFVDMMT 203

Query: 136 DTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           +    + ++ R  ++ S+R  +   +F+E  TPIL A +S   A+ F+     N    + 
Sbjct: 204 NRSVIDTIRKRHTVLRSLREYLDMRHFVEVETPILHAVASGANAKPFVTHHNANNADLF- 262

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y +  +  G +R ++I   FR+ED      P EF   +   ++   +D++   
Sbjct: 263 LRVAPELYLKQCVVGGMERVYEIGKVFRNEDADRSHNP-EFTTCEFYAAYHTYEDLITMT 321

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT--EHFVHSEF 311
           E++ R +    +    +     R      I   G     +     + + +  E    +E 
Sbjct: 322 EDIFRHLALRANGTTQLQIQCERAGITREID-LGATFRRISVYDEIQSASGVELPPPNEL 380

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
                +  ++       I            D++ ++
Sbjct: 381 NTPKGLAYMSAIMLRHDIQFPAVRTAAKMFDKLIDF 416



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 8/111 (7%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +P  M     E           A +++L  NG E  +     +  +     F    I ++
Sbjct: 431 HPIFMSPLAKEH----SSRPGLAERFELFINGIEYCNAYSELNDPQEQCHRFQQQLIDRQ 486

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             +           ++ Q G+PP  G   GIDR+VMLL G+  +R+  +FP
Sbjct: 487 GGDEEAMPLDETFLKSLQVGLPPTAGWGMGIDRVVMLLSGSSTIRDGIIFP 537


>gi|15834783|ref|NP_296542.1| lysyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270284950|ref|ZP_06194344.1| lysyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270288976|ref|ZP_06195278.1| lysyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336348|ref|ZP_07224550.1| lysyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|11387148|sp|Q9PLE1|SYK_CHLMU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|7190200|gb|AAF39039.1| lysyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 524

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 57/306 (18%), Positives = 120/306 (39%), Gaps = 28/306 (9%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD------SACFEIAKSVRSEWVLCI 73
            VR +G +   R  G   F  I D     QV+ N D              S++       
Sbjct: 66  KVRFAGRLVLFRSMGKNAFGQILDRDAKIQVMFNRDFSQVAGLPADSEISSIKFIEKKLD 125

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++         +  +G++ +  + + +L  +  + LP        + IR++ R+ DL
Sbjct: 126 LGDILGIDGYLFFTH--SGELTVLVETVTLLCKSL-ISLPDKHSGLADKEIRYRKRWADL 182

Query: 134 RR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSF 191
              + + K  + R+RI+  +R  M  ++F+E  TP+L        A  F+   +      
Sbjct: 183 ISSEEVRKTFLARSRILKLIREYMDQQDFLEVETPVLQTIYGGAEATPFVTTLKALHTEM 242

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + L  + +   + ++  G  R ++I   FR+E       P EF  ++   ++ + +D++ 
Sbjct: 243 F-LRISLEIALKKILVGGMSRVYEIGKVFRNEGIDRTHNP-EFTMIEAYAAYWDYNDVMK 300

Query: 252 TMENVLRGVFEEFSNGN---------------TVSNNFLRICYDDAIRRYGTDKPDLRNP 296
            +EN++  V    +NG                     ++R+   ++I  YG    D  + 
Sbjct: 301 CVENLVEYVVRALNNGETKVQYSHLKSGPQIVDFKAPWIRMTMKESISVYGGVDVDQYSE 360

Query: 297 IIMHNV 302
             + ++
Sbjct: 361 HELRDI 366



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 46/125 (36%), Gaps = 10/125 (8%)

Query: 451 KIDFAHNPFTMPQGGME---SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM--- 504
           K+   H+    P        +L+  D   +   +++  C G E+ +     +        
Sbjct: 398 KLIAPHHITDHPLETTPLCKTLRSGDETLV--ERFESFCLGKELCNAYSELNDPLQQRKL 455

Query: 505 --LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              Q                     A   GMPP GG   GIDR+VM+L  A ++R+V  F
Sbjct: 456 LEEQMRKKALNPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMMLTDAASIRDVLYF 515

Query: 563 PMSQN 567
           P+ + 
Sbjct: 516 PVMRR 520


>gi|304408354|ref|ZP_07390001.1| lysyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304342643|gb|EFM08490.1| lysyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 494

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 63/281 (22%), Positives = 119/281 (42%), Gaps = 11/281 (3%)

Query: 6   THSCGDLGVSDVG-SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           TH   +  + + G S + ++G V  +R  G I+F+ I+   G  Q+    D        +
Sbjct: 31  THELHEAAMLEDGVSDIAVAGRVRSIRHMGQIVFVTIQSVRGRLQLFVRKDELGEGSFDA 90

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
                     G  +  S          G+  L     + L  +   P+P          +
Sbjct: 91  FIQY---VDTGDWIGASGTMFTTKA--GEKTLRVVGYQFLGKSL-HPMPDKWSGMTNTEL 144

Query: 125 RFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLV 182
           R++YR+LD+   D     +++RT ++ S+R  +  + F+E  TPIL  S+    A+ F+ 
Sbjct: 145 RYRYRYLDMWLSDETSSRLLRRTSMLRSLRAFLDNKGFLEVDTPILQHSASGALAKPFVT 204

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y L  AP+ Y + L+A GF + +++A CFR+E   S +   EF  ++   +
Sbjct: 205 HHHALGQDMY-LRIAPETYLKRLVAGGFTKLYEVAKCFRNEGI-SPQHLQEFTMVEGYSA 262

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
           F   +D +  ++ +L+ +  E     + S     I + +  
Sbjct: 263 FENYEDAMALIQEMLQYLLSETFGTLSFSIGGEWIDFSEPW 303



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
           + ND       ++ LV  G EI +                   + K              
Sbjct: 384 RANDERPAVTDRFQLVLCGAEIVNAYSELVDPLEQRARLEQQALLKSGGDVEAMGMDEDY 443

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP--MSQNFCD 570
            RA + GMPP  G   GI+R++M++  + N++E   FP   S    D
Sbjct: 444 LRAMEYGMPPIAGWGFGIERLLMIVTDSPNIKECVYFPLVRSMEGED 490


>gi|183221108|ref|YP_001839104.1| asparaginyl-tRNA synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911199|ref|YP_001962754.1| asparaginyl-tRNa synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167775875|gb|ABZ94176.1| Asparagine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779530|gb|ABZ97828.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase; AsnRS)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 434

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 74/407 (18%), Positives = 131/407 (32%), Gaps = 14/407 (3%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
           L GWV  +R +  + FL +R +  I QVV   +S   ++ K ++S   L  +  +     
Sbjct: 21  LKGWVQGLRGNNHVQFLQLRTNGKILQVVCEKESLGEDLFKQIKS---LPQETSITVTGK 77

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
              NA    G+ EL  +   I+  + + P+               +R L LR        
Sbjct: 78  WQENAKAPGGE-ELVLESFHIVGASSDYPITPKDHGP---DFLHNHRHLWLRSKRQLAIQ 133

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202
             R+ +  ++R     E +    TPILT S  E A         + G  Y L Q  Q Y 
Sbjct: 134 RVRSELSFAIREFFRNEGYTLIDTPILTGSIGESAGTLFSTEYFDLGQAY-LAQTGQLYL 192

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           +   A    + +   P FR E  ++ R   EF+ L+ E +F+ Q+  L+  E  ++ V  
Sbjct: 193 ETA-AFAHSKVYCFGPTFRAEKSKTKRHLTEFWMLEAETAFLGQEGNLDLQERFVKSVLT 251

Query: 263 EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNP 322
                       L    +  +       P +     +  + E     E+           
Sbjct: 252 VTVERTIEDLKTLERNPETLLSYLNKPFPRVEYETAIQILKEAGESIEWGEDINAEREQI 311

Query: 323 GYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIV 382
               +          RA   +     ++ G P        +   G    +G   +  +  
Sbjct: 312 LTTHFGTAIFIQNFPRAI--KAFYMKQNPGDPRTVLSADLIAPDGIGEIIGGSEREESYE 369

Query: 383 NTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA---DARNHIAQELGI 426
                     +   D  +++          A         IA   G+
Sbjct: 370 KIVERLQEEGLPPEDYAWYLDLRKYGSVPHAGFGMGLERVIAWICGL 416



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 8/95 (8%)

Query: 473 DLLSIKAFQYDLVCNGF--EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           D  ++ +   DL+      EI  G  R    E +++     G+        +       +
Sbjct: 340 DPRTVLSA--DLIAPDGIGEIIGGSEREESYEKIVERLQEEGLPP----EDYAWYLDLRK 393

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G  PH G   G++R++  + G  ++RE   FP  
Sbjct: 394 YGSVPHAGFGMGLERVIAWICGLPHIRECIPFPRM 428


>gi|326502956|dbj|BAJ99106.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 544

 Score =  163 bits (413), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 72/348 (20%), Positives = 121/348 (34%), Gaps = 32/348 (9%)

Query: 5   RTHS-CGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVV------ANPDS 56
           RT +  GDL  +  G  V + G    +RP    + F+ +R      Q V      A   +
Sbjct: 79  RTWTDIGDLDEAAAGRSVLIRGSAQTLRPVSKKMAFVVLRQSMSTVQCVLVASPDAGVST 138

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--------- 107
                A S+  E ++ ++G+V             T Q+E+  +K+  ++ A         
Sbjct: 139 QMVRFATSLSKESIVDVEGIVTLPKEPL---KATTQQVEIQVRKVYCINRAIPTLPINLE 195

Query: 108 ---------EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA 158
                    ++            +  R  YR +DLR          +  + N  R  + +
Sbjct: 196 DAARSEAEFDKAEQNGEKLVRVLQDTRLNYRAIDLRTPANQAIFRIQCHVENKFREFLFS 255

Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
           ENFI   +P L   S EG            G    L Q+PQ YKQ+ +  GF R F++ P
Sbjct: 256 ENFIGIHSPKLIGGSSEGGASVFKLEYN--GQPACLAQSPQLYKQMSICGGFGRVFEVGP 313

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
            FR E   + R   EF  LD EM   E   ++ + ++ +   +F+  +         +  
Sbjct: 314 VFRAEKSNTHRHLCEFIGLDAEMEIKEHYFEVCDIIDGLFVAIFKHLNENCQKELETINR 373

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
            Y     +Y      L     +  + E     E        +      
Sbjct: 374 QYPFEPLKYLEKTLKLTYEEGIKMLKEAGTEIEPMGDLNTEAEKKLGR 421



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 75/218 (34%), Gaps = 25/218 (11%)

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GL    ++         +  + +       + +   L +   +    +     +      
Sbjct: 351 GLFVAIFKHLNENCQKELETINRQYPFEPLKYLEKTLKLTYEEGIKMLKEAGTEIEP-MG 409

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGND 473
           D      ++LG +    +   +   F  Y       +   A  PF TMP     +     
Sbjct: 410 DLNTEAEKKLGRLVKEKYGTEF---FILY-------RYPLAVRPFYTMPCYDDPAY---- 455

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                +  +D+   G EI SG  R H  E++ +     GI    + +       +F  G 
Sbjct: 456 -----SNSFDVFIRGEEIISGAQRIHTPELLRKRAIECGIDASTIAS----YIESFSYGA 506

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PPHGG   G++R+VML     N+R+ SLFP        
Sbjct: 507 PPHGGFGVGLERVVMLFCALNNIRKTSLFPRDPQRLAP 544


>gi|117927425|ref|YP_871976.1| lysyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117647888|gb|ABK51990.1| lysyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 501

 Score =  163 bits (413), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 62/357 (17%), Positives = 130/357 (36%), Gaps = 30/357 (8%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RT    ++  +          G    ++G +   R  G + F  +RD  G  Q++ +   
Sbjct: 43  RTAFIAEIRAAYGDLPPDTFTGQHASIAGRLMLSRIGGKLCFGVLRDGSGDLQIMLSAQK 102

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
                 +++     L   G  +    E I +   +G++ + A      S A   PLP   
Sbjct: 103 VG---DRALALWKSLVDLGDHIGVHGEIITSR--SGELSILADSWSFTSKALR-PLPEKH 156

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILT-ASSP 174
           +       R + R++DL  ++  +++V  R  ++ S+R  +    ++E  TP+L      
Sbjct: 157 KGLTDPEARIRRRYVDLIVNSRARSMVHIRAAVLRSLRDTLSRRGYLEVETPVLQLVHGG 216

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F           Y L  A +   + L+  G +R ++I   FR+E   S   P EF
Sbjct: 217 AAARPFRTHLNAFDLPLY-LRIALELPLKRLVVGGLERVYEIGRVFRNEGVDSSHSP-EF 274

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
            +L+   ++ + D + + +  ++    +       + ++   I      R          
Sbjct: 275 TELEAYEAYGDYDTMADLVRELVLDAAKAIDAVQVLGSSGDVIDLAGPWRT--------- 325

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN-RAFCDRMNEWARS 350
             + +H      V  E  V +    ++     + +P      +    C+   + A+ 
Sbjct: 326 --VTVHQAVSEAVGEEITVDTPAAVLHQIAARYNVPVPPAAEHGEVVCELFEKVAQP 380



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYR 527
            D     A  +DL+ NG E+A             +  +   +                 +
Sbjct: 404 TDPR--LAEAWDLIINGIELAPAYSELVDPVEQRRRLTEQSVRAAGGDPEAMQLDEDFLQ 461

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A + G PP GG+  G+DR++MLL G+  +R+V LFP
Sbjct: 462 ALEYGAPPMGGLGLGVDRLLMLLTGSG-IRDVILFP 496


>gi|323305592|gb|EGA59333.1| Krs1p [Saccharomyces cerevisiae FostersB]
          Length = 437

 Score =  163 bits (413), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 94/225 (41%), Gaps = 10/225 (4%)

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
             +PDS   +    ++   ++ ++G V      T       G++ +   ++++L+     
Sbjct: 7   YCDPDSY-EKDHDLLKRGDIVGVEGYV----GRTQPKKGGEGEVSVFVSRVQLLTPCL-H 60

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
            LP        +  R++ R+LDL  +       + R+ II  +R  +    FIE  TP++
Sbjct: 61  MLPADHFGFKDQETRYRKRYLDLIMNKDARNRFITRSEIIRYIRRFLDQRKFIEVETPMM 120

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    A+ F+          Y +  AP+ + + L+  G DR ++I   FR+E     
Sbjct: 121 NVIAGGATAKPFITHHNDLDMDMY-MRIAPELFLKQLVVGGLDRVYEIGRQFRNEGIDMT 179

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
             P EF   +   ++ +  D+++  E +   + +E +    +  +
Sbjct: 180 HNP-EFTTCEFYQAYADVYDLMDMTELMFSEMVKEITGSYIIKYH 223



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 4/121 (3%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E E         F  PQ      K +        ++++     EI +     +       
Sbjct: 300 ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTELNDPFDQRA 359

Query: 507 AFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F      K+  ++           A + G+PP GG   GIDR+ M L  +  +REV LF
Sbjct: 360 RFEEQARQKDQGDDEAQLVDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLF 419

Query: 563 P 563
           P
Sbjct: 420 P 420


>gi|226505916|ref|NP_001145746.1| hypothetical protein LOC100279253 [Zea mays]
 gi|219884291|gb|ACL52520.1| unknown [Zea mays]
          Length = 545

 Score =  163 bits (413), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 65/289 (22%), Positives = 116/289 (40%), Gaps = 31/289 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVV------ANPDSACFEI 61
            GDL  S  G  V + G +  +RP    + F+ +R      Q V      A   +     
Sbjct: 85  IGDLDDSSAGRSVLIRGSLQAIRPVSKKMAFVVLRQSMSTVQCVLVASADAGVSTQMVRF 144

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-------------- 107
           A ++  E ++ ++G+V             T Q+E+  +KI  ++ A              
Sbjct: 145 ATALSKESIVDVEGVVSLPKEPL---KATTQQVEIQVRKIYCINRAIPTLPINLEDAARS 201

Query: 108 ----EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
               E+  L         +  R  YR +DLR  +       + ++ N  R  +++++F+ 
Sbjct: 202 EADFEKAELAGEKLVRVGQDTRLNYRAIDLRTPSNQAIFRIQCQVENKFREFLLSKDFVG 261

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             TP L + S EG            G    L Q+PQ +KQ+ +  GF+R F++ P FR E
Sbjct: 262 IHTPKLISGSSEGGAAVFKLLYN--GQPACLAQSPQLHKQMALCGGFERVFEVGPVFRAE 319

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVS 271
           +  + R   EF  LD EM   E   ++ + ++ +   +F+  +      
Sbjct: 320 NSNTHRHLCEFVGLDAEMEIKEHYFEVCDIIDGLFVSIFKHLTENCNKE 368



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 71/214 (33%), Gaps = 23/214 (10%)

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GL    ++         +  + +       + +   L +   +    +     +      
Sbjct: 352 GLFVSIFKHLTENCNKELETINRQYPFEPLKYLDKTLKLTYEEGVQMLKEAGTEIEP-MG 410

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           D      ++LG +    ++     DF  +       +   A  PF               
Sbjct: 411 DLNTEAEKKLGRLVREKYD----TDF--FIM----YRYPLAVRPFYTMPCYD-------- 452

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               +  +D+   G EI SG  R H  E++ +  +  GI    +          F  G P
Sbjct: 453 NPAYSNSFDVFIRGEEIISGAQRIHTPELLTKRATECGIDVSTIST----YIEVFSYGAP 508

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PHGG   G++R+VML     N+R+ S+FP     
Sbjct: 509 PHGGFGVGLERVVMLFCALNNIRKTSMFPRDPQR 542


>gi|302681115|ref|XP_003030239.1| hypothetical protein SCHCODRAFT_69166 [Schizophyllum commune H4-8]
 gi|300103930|gb|EFI95336.1| hypothetical protein SCHCODRAFT_69166 [Schizophyllum commune H4-8]
          Length = 569

 Score =  163 bits (413), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 67/287 (23%), Positives = 118/287 (41%), Gaps = 23/287 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             VR+SGWVHR+R   GI F+ +RD  G  Q V +   A    A ++  E  + + G + 
Sbjct: 126 KRVRVSGWVHRLRDQKGIKFIILRDGTGYLQAVLSGRVAETYDALTLTLESTVELVGTLQ 185

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +            G  ELS    ++L  A   E         +   SI+   R L +R +
Sbjct: 186 ALPEG----KTAPGGHELSVDYWKVLGAAPGGEDAFTNRVNEKSDPSIQADLRHLVIRGE 241

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T    +  R+ ++++MR      + +E + P L  +  EG          NQ +F  L Q
Sbjct: 242 TASTTLRLRSALLSAMREVFARHHMLEVTPPCLVQTQVEGGATLFKLDYYNQPAF--LTQ 299

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  + S     + +   FR E+  + R   E+  L+ E++F+  D+++  +E +
Sbjct: 300 SSQLYLETCLPS-LGDVYCVQESFRAENSNTRRHLSEYTHLEGELAFITFDELMTHLEAI 358

Query: 257 LR-------------GVFEEFS-NGNTVSNNFLRICYDDAIRRYGTD 289
           +               + ++ +         FLR+ Y DAI      
Sbjct: 359 ICETVDILLDNPTTAALVKQLNPGFKKPERPFLRMPYVDAIAWLNEH 405



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 46/136 (33%), Gaps = 15/136 (11%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL-VCNGFEIASGG 495
           I+  P +  +            F M +     + G D   +     DL + N  EI  G 
Sbjct: 448 IIGKPMFLHS-----FPAELKAFYMKK-----IPGGDGKHVFTESCDLLMPNVGEIVGGS 497

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           +R    + +   +   GI        +       + G   HGG   GI+R++  L     
Sbjct: 498 MRIADLDELFAGYKREGIDAAP----YYWYTDQRKYGTCEHGGYGVGIERLLAWLGNRYT 553

Query: 556 VREVSLFPMSQNFCDL 571
           VRE SL+P        
Sbjct: 554 VRECSLYPRWPGRATP 569


>gi|154280104|ref|XP_001540865.1| hypothetical protein HCAG_04705 [Ajellomyces capsulatus NAm1]
 gi|150412808|gb|EDN08195.1| hypothetical protein HCAG_04705 [Ajellomyces capsulatus NAm1]
          Length = 973

 Score =  163 bits (413), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 67/376 (17%), Positives = 140/376 (37%), Gaps = 26/376 (6%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH-YGITQVVANPDSA----CFEIAKSV 65
           +    +G  V     VH +R     ++F+  R     +  V+A           +  + +
Sbjct: 156 ITPHSIGQEVTFRARVHHIRNMSSKLVFVIFRQQVTTMQGVLAEKPGMISTLMVQWVERI 215

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--------VFGE 117
           R   ++ + G++ S         I    +EL  Q++ ++   E+                
Sbjct: 216 RVGSIVKVRGVLSSSKVPVTGCTIH--DVELDIQELHVVVHREDPIPFSVYEAELLNKDA 273

Query: 118 REYP-------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           +          +  R   R LDLR DT       ++ I N  R  + ++ FIE  TP L 
Sbjct: 274 KNTDGRRNHVLDRTRLSNRILDLRTDTSQSIFRIQSAISNLFRASLDSQGFIEIHTPKLQ 333

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           +S+ E            + +F A  Q+PQ  KQ+ +A+ F+R ++I   FR E+  + R 
Sbjct: 334 SSATESGASVFEVKYFTREAFLA--QSPQLAKQMAIAADFERVYEIGAVFRAENSNTHRH 391

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             E+  LD+EM+  E   + L T+++VL+ +F+          + ++  +      +  +
Sbjct: 392 LTEYTGLDIEMAIEEHYHEALETIDSVLKEIFKGIYGRYRREVDIIKNQFPHEDLVWLDE 451

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
            P +     +  + +     +    S    +    E+          +       +++ +
Sbjct: 452 TPIIPFAEGIKLLNDSGWRQDGEELSVNEDLGTRDEIRLGELIKEKYHTDLLPYWDKFPK 511

Query: 350 SQGQPGLAYIFWRLDE 365
           S     + +   R  +
Sbjct: 512 SARAHFMPWKILRTPD 527



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/177 (24%), Positives = 68/177 (38%), Gaps = 23/177 (12%)

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
            DS +   G+ L         R+ I   LG +    +      D     + ++  K   A
Sbjct: 465 NDSGWRQDGEELSVNEDLG-TRDEI--RLGELIKEKYH----TD--LLPYWDKFPKSARA 515

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           H          + L+  D        +D+   G EI SGG R H  +++ Q     GI+ 
Sbjct: 516 HFM------PWKILRTPD----FTNSFDIFVRGQEIVSGGQRIHDEKILEQRMKEAGINP 565

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
             +E         F+ G PPH G   G++R++ML+L   N+R  SLF         +
Sbjct: 566 LAMEE----YLEGFRWGAPPHAGAGIGLERLLMLILKLGNIRLASLFHRDPKSFQDM 618


>gi|322823684|gb|EFZ29386.1| lysyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 674

 Score =  163 bits (412), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 65/338 (19%), Positives = 136/338 (40%), Gaps = 17/338 (5%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
            VR++G V  VR  G IIF+ IR +   +  V    +    E  K ++    L +  ++ 
Sbjct: 124 TVRVAGRVTSVRDIGKIIFVTIRSNGNELQVVGQVGEHFTREDLKKLK--VSLRVGDII- 180

Query: 79  SRSAETINANIITGQIELSAQKIEILS---VAEELPLPVF--GEREYPESIRFKYRFLDL 133
              A+ +   +  G++ ++A ++ ILS     +++  P            ++++YRF D+
Sbjct: 181 --GADGVPCRMQRGELSVAASRMLILSPYVCTDQVVCPNLRGFTVLQDNDVKYRYRFTDM 238

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +      +K R  ++ ++R      NF+E  TP+L T +S   A+ F+     N    
Sbjct: 239 MTNPCVIETIKKRHVMLQALRDYFNERNFVEVETPVLHTVASGANAKSFVTHHNANAMDL 298

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + L  AP+ + +  +  G +R ++I   FR+ED      P EF   +   ++   +D++ 
Sbjct: 299 F-LRVAPELHLKQCIVGGMERIYEIGKVFRNEDADRSHNP-EFTSCEFYAAYHTYEDLMP 356

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT--EHFVHS 309
             E++ R +    +    V         +      G     +     +  V+  E    +
Sbjct: 357 MTEDIFRQLAMRVNGTTLVQIYPENAHGNPVTVDLGKPFRRVSVYDEVQRVSGVEFPPPT 416

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
           E      I  ++     + IP           +++ ++
Sbjct: 417 ELNTPKGIAYMSVVMLRYNIPLPPVRTAPKMFEKLIDF 454



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           I     E  ++MD P +                 M     E +         A +++L  
Sbjct: 456 ITDRIVEPTFVMDHPLF-----------------MSPLAKEQVS----RPGLAERFELFV 494

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAG 542
           NG E  +     +        F    + ++V +           ++ Q G+PP  G   G
Sbjct: 495 NGIEYCNAYSELNDPHEQYHRFQQQLVDRQVGDEEAMPLDETFLKSLQVGLPPTAGWGMG 554

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR +MLL  + N+R+  +FP
Sbjct: 555 IDRALMLLTNSSNIRDGIIFP 575


>gi|149448248|ref|XP_001511312.1| PREDICTED: similar to Asparaginyl-tRNA synthetase 2, mitochondrial
           (putative), partial [Ornithorhynchus anatinus]
          Length = 545

 Score =  163 bits (412), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 101/263 (38%), Gaps = 18/263 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  +   GWV  VR    I+FL + D   +  +    DS+       +     + + G +
Sbjct: 39  GERLSPQGWVRSVRSQKDILFLHVNDGSSLESLQVVADSSL--DTADLTFGSAVEVQGRL 96

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    +  N       +EL+A+KI ++        P+  +  +P     ++  L  R +T
Sbjct: 97  VRSPHKKQN-------VELTAEKIRVVGHCNPTEFPLKTKERHPLEYLRQHPHLRCRSNT 149

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV-----PSRVNQGSFY 192
           L   +  R     ++        ++   TP++T++  EGA +        P+R     F+
Sbjct: 150 LGALLRVRGEATAAVHSFFKEHGYVHIHTPVITSNDCEGAGELFQVEPSSPAREPGSLFF 209

Query: 193 ---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DD 248
              A      Q    +M+  F   F   P FR E+ +S R   EFY ++ E++F E   D
Sbjct: 210 DVPAFLTVSGQLHLEVMSGAFTHVFTFGPTFRAENSQSRRHLAEFYMVEAEVAFTESLQD 269

Query: 249 ILNTMENVLRGVFEEFSNGNTVS 271
           I   ME + +             
Sbjct: 270 ITQVMEGLFKATTATVLARCPDD 292


>gi|323355807|gb|EGA87621.1| Krs1p [Saccharomyces cerevisiae VL3]
          Length = 437

 Score =  163 bits (412), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 94/225 (41%), Gaps = 10/225 (4%)

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
             +PDS   +    ++   ++ ++G V      T       G++ +   ++++L+     
Sbjct: 7   YCDPDSY-EKDHDLLKRGDIVGVEGYV----GRTQPKKGGEGEVSVFVSRVQLLTPCL-H 60

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
            LP        +  R++ R+LDL  +       + R+ II  +R  +    FIE  TP++
Sbjct: 61  MLPADHFGFKDQETRYRKRYLDLIMNKDARNRFITRSEIIRYIRRFLDQRKFIEVETPMM 120

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              +    A+ F+          Y +  AP+ + + L+  G DR ++I   FR+E     
Sbjct: 121 NVIAGGATAKPFITHHNDLDMDMY-MRIAPELFLKQLVVGGLDRVYEIGRQFRNEGIDMT 179

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
             P EF   +   ++ +  D+++  E +   + +E +    +  +
Sbjct: 180 HNP-EFTTCEFYQAYADVYDLMDMTELMFSEMVKEITGSYIIKYH 223



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 4/121 (3%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E E         F  PQ      K +        ++++     EI +     +       
Sbjct: 300 ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTELNDPFDQRA 359

Query: 507 AFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F      K+  ++           A + G+PP GG   GIDR+ M L  +  +REV LF
Sbjct: 360 RFEEQARQKDQGDDEAQLVDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLF 419

Query: 563 P 563
           P
Sbjct: 420 P 420


>gi|67624611|ref|XP_668588.1| aspartate--tRNA ligase [Cryptosporidium hominis TU502]
 gi|54659788|gb|EAL38351.1| aspartate--tRNA ligase [Cryptosporidium hominis]
          Length = 435

 Score =  163 bits (412), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 59/286 (20%), Positives = 118/286 (41%), Gaps = 24/286 (8%)

Query: 5   RTHS-CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIA 62
           RT S   +L  +  G  + L G +   R  G + F+ +R  +   Q+VA+ ++ +  E+ 
Sbjct: 71  RTFSKIKELNSNQKGEKIWLRGRITESRCKGSLGFVLLRQTFYRLQLVADANNGSSKEMI 130

Query: 63  K---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER- 118
           K    +  E ++ + G ++      +++   T  IE+S +++  +S A         +  
Sbjct: 131 KWLGCLPIESMIDVYGTIVVPETPVVSS---TQDIEVSVERVYCVSSACSELPFQLKDAN 187

Query: 119 ------------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                       +  + +R   R LDLR          ++ +   +R  +    FIE  T
Sbjct: 188 RVETEDEDSTIIKVLQDVRLDNRVLDLRTYLSQAIFRIQSEVCRLLREFLTEREFIEIHT 247

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P L   + E           +  +   L Q+PQ +KQ+ +    +R F+I P FR E+  
Sbjct: 248 PKLLPGASESGATVFKVDYFSNTA--CLAQSPQLHKQMSICGDLERVFEIGPVFRAENSN 305

Query: 227 SDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVS 271
           + R   EF  +D+EM+      ++++  + + R +F   +      
Sbjct: 306 THRHLCEFVGVDIEMNIENTYHELVDVFDAMFRHIFRGINTHCKNE 351


>gi|328773412|gb|EGF83449.1| hypothetical protein BATDEDRAFT_9285 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 571

 Score =  163 bits (412), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 63/290 (21%), Positives = 114/290 (39%), Gaps = 24/290 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
             +   + V++SGWVHR+R  G  ++F+ +RD  G  Q V          A ++  E  +
Sbjct: 135 STTHREARVKISGWVHRLRVQGKDMMFVVLRDGSGYIQCVLTGKQCNTYDALTLTVESTV 194

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYR 129
            I G++ +            G  EL +    I   A   +         E    I    R
Sbjct: 195 TIYGVIKTVPEG----KSAPGGHELISDYWVIHGKAPGGDEAFGNKLNTESSPDILLDQR 250

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR +T    +  R  ++   R    +    E + P++  +  EG       +   + 
Sbjct: 251 HLVLRGETTSSIMRVRALMLKGFRSFFESRFITEVTPPLMVQTQVEGGSTLFEFNYYEEK 310

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y +  + S  D  + I   FR E   + R   EF   + E++F+  DD+
Sbjct: 311 AY--LTQSSQLYLETCLPSIGDS-YCITESFRAEKSHTRRHLSEFTHCEAELAFITFDDL 367

Query: 250 LNTMENVL-------------RGVFEEFS-NGNTVSNNFLRICYDDAIRR 285
           L+ ME+++               + ++ + N       F R+ Y +AI+ 
Sbjct: 368 LSCMEDMVVDVVGSILADPIGASIVKDLNPNFKAPKKPFRRMQYTEAIKW 417



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R      ++  +S  GI        +       + G   HGG   G+
Sbjct: 488 LMPNVGEIVGGSMRISDLAELMAGYSREGIDPSP----YYWFTDQRKYGTCEHGGFGLGV 543

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R++  LL   +VREV L+P     C  
Sbjct: 544 ERLLAWLLDRFSVREVCLYPRFMGRCTP 571


>gi|158318146|ref|YP_001510654.1| lysyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158113551|gb|ABW15748.1| lysyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 496

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 61/336 (18%), Positives = 124/336 (36%), Gaps = 27/336 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS----VRSEWVLCI 73
           G+ VR++G V   R  GG++F  I+D  G  QV  + D    E  +     V+    + +
Sbjct: 29  GTAVRIAGRVVLWRRMGGLVFGHIQDRAGRVQVSLSRDELGVETFQEWARAVKIGDFVGV 88

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G + +            G+  + A ++ +L+         +      E+   +     L
Sbjct: 89  TGTLYTTRR---------GERTVGASELVVLNRTVRALPDKWQGLSNVEARLRRRYLDLL 139

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFY 192
             +   +    R R I+ +R  +   +F+E  TP+L  A+S   AR F+         FY
Sbjct: 140 VNNDSRERFRTRARTISRIRRFLDDNDFLEVETPMLQEAASGAAARPFITHHNALGEDFY 199

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+ + + ++    DR +++   FR+E         EF  L+   ++ +  D +  
Sbjct: 200 -LRISPETFLKRVVVGSLDRVYELGRNFRNEGMD-PSHLQEFTMLEWYAAYWDYRDNMRF 257

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +  ++  V ++             + YD     +G D P+L     +   T      +  
Sbjct: 258 VREMILAVLDDVFGS-------RTVTYDGVKLDFGADWPELDYRAEVARRT----GIDLT 306

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           V   + ++        +            D + + A
Sbjct: 307 VVRDLPTLRARISELGLEVDDAASYAGLVDLLYKKA 342



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 6/118 (5%)

Query: 455 AHNP---FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
            H+P     + +   E     D+  +    ++LV    E+     +    E   +  +  
Sbjct: 354 VHHPAELVPLARRSDEDPSRLDMFQVVVNGWELVKAYSELVDPVEQRRRLEEQAELRAAG 413

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                ++E  F     A + GMPP  G+  GIDR++ LL  A  +REV LFP+ ++  
Sbjct: 414 DDETMMLEEDF---IEAMEYGMPPMSGLGIGIDRLIALLTDAPTLREVVLFPLMRDSR 468


>gi|19075887|ref|NP_588387.1| mitochondrial lysine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|74582575|sp|O74858|SYKM_SCHPO RecName: Full=Lysyl-tRNA synthetase, mitochondrial; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS; Flags: Precursor
 gi|3766370|emb|CAA21422.1| mitochondrial lysine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe]
          Length = 531

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 85/546 (15%), Positives = 168/546 (30%), Gaps = 110/546 (20%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDGLVM 78
            + G +  +R  G  + F D+       QVV N  +     E+             G  +
Sbjct: 85  TVCGRISSIRYSGSKLAFFDVLYGNKKLQVVFNKKNIGTEEEMKGKFIPRLKALQKGDCI 144

Query: 79  SRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
             S         +G++ + A ++ ++LS            +      RF+ RF+D+  +T
Sbjct: 145 QCSGNV--GRSGSGELSIYATELPKLLSPCLHPIPV----KLTNYEKRFEKRFVDMMSNT 198

Query: 138 LH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
              + + KR RII S+R       F+E  TPIL+           + S +++     L  
Sbjct: 199 KSLELLEKRYRIIESIRKFFSERGFLEVETPILSHHFGGATARPFITSDIHKLPL-TLRC 257

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + + L+  G +R F++   FR+E   +   P EF   +   +++  + +    E +
Sbjct: 258 APELWLKQLVIGGMNRVFELGKNFRNEGIDATHNP-EFTSCEAYCAYLNLEGMKKLTEEL 316

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +R +    +         L+I         G +  +   P +   +       +     +
Sbjct: 317 IRFICLTINGN-------LQISGQTVDLEKGFEVIEF-IPALQKELNVELSPLDNSENCR 368

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVA 376
              ++       +  K            +            ++        +   M P+A
Sbjct: 369 KQLISIFKRCEIMLPKTCTVAHLLDKLFDSLVLKYNTSSPKFVI------NHPEVMSPLA 422

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K                   D   +                  I++   +     +E C 
Sbjct: 423 KS------------------DIKLY------------GAVEQRISKRFELYI-GGYEIC- 450

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
                     EEE      ++ F   +     L  ++  +  +   D V           
Sbjct: 451 -------NAYEEENDPVAQYHKFQAQKYDRLQLGDDETPAPDS---DFVH---------- 490

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                                          A + G+PP  G   G+DR+VML+ G   +
Sbjct: 491 -------------------------------ALEYGLPPTAGWGMGVDRLVMLMTGQSKI 519

Query: 557 REVSLF 562
            E+  F
Sbjct: 520 SEILPF 525


>gi|71404256|ref|XP_804850.1| lysyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70868022|gb|EAN82999.1| lysyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 652

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 64/338 (18%), Positives = 135/338 (39%), Gaps = 17/338 (5%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
            VR++G V  VR  G IIF+ IR +   +  V    +    E  K ++    L +  ++ 
Sbjct: 102 TVRVAGRVTSVRDIGKIIFVTIRSNGNELQVVGQVGEHFTREDLKKLK--VSLRVGDII- 158

Query: 79  SRSAETINANIITGQIELSAQKIEILS---VAEELPLPVF--GEREYPESIRFKYRFLDL 133
              A+ +   +  G++ ++A ++ ILS     + +  P            ++++YRF D+
Sbjct: 159 --GADGVPCRMQRGELSVAASRMLILSPYVCTDRVVCPNLRGFTVLQDNDVKYRYRFTDM 216

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +      +K R  ++ ++R      NF+E  TP+L T +S   A+ F+     N    
Sbjct: 217 MTNPCVIETIKKRHVMLQALRDYFNERNFVEVETPVLHTVASGANAKSFVTHHNANAMDL 276

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + L  AP+ + +  +  G +R ++I   FR+ED      P EF   +   ++   +D++ 
Sbjct: 277 F-LRVAPELHLKQCIVGGMERIYEIGKVFRNEDADRSHNP-EFTSCEFYAAYHTYEDLMP 334

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT--EHFVHS 309
             E++ R +    +    V         +      G     +     +  ++  E    +
Sbjct: 335 MTEDIFRQLAMRVNGTTVVQIYPENAHGNPVTVDLGKPFRRVSVYDEIQRMSGVEFPPPN 394

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
           E      I  ++     + IP           +++ ++
Sbjct: 395 ELNTPKGIAYMSVVMLRYNIPLPPVRTAAKMFEKLIDF 432



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 50/141 (35%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           I     E  ++MD P +                 M     E +         A +++L  
Sbjct: 434 ITDRVVEPTFVMDHPLF-----------------MSPLAKEQVS----RPGLAERFELFV 472

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAG 542
           NG E  +     +        F    + ++  +           ++ Q G+PP  G   G
Sbjct: 473 NGIEYCNAYSELNDPHEQYHRFQQQLVDRQGGDEEAMPLDETFLKSLQVGLPPTAGWGMG 532

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR +MLL  + N+R+  +FP
Sbjct: 533 IDRALMLLTNSSNIRDGIIFP 553


>gi|325971584|ref|YP_004247775.1| asparaginyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324026822|gb|ADY13581.1| Asparaginyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 462

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 67/422 (15%), Positives = 135/422 (31%), Gaps = 58/422 (13%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V   GWV   R    + FL++ D   +  +    D         + +       G  +
Sbjct: 16  EIVTAEGWVRTKRDSKNVCFLEVNDGSCLKGLQVVIDKDTLADQNILSA----ITTGCSV 71

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                 + +      +E+++  I ++        P+  +R   E +R +   L  R +  
Sbjct: 72  ICKGPIVESAGGDQAVEMASSDITLVGECPVDTYPLQKKRHTIEYLR-EISHLRARTNMF 130

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ---------- 188
                 R  +  ++        F   +TPI++AS  EGA +  + + ++           
Sbjct: 131 GAVARVRNTLSYAVHQFFQERGFAYVNTPIISASDAEGAGEQFLVTTLDLHNIPKTEEGK 190

Query: 189 ----GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 F+   A      Q +    A      +   P FR E+  + R   EF+ ++ EM
Sbjct: 191 IDYSKDFFGREAFLTVSGQLEGETYAMALKNIYTFGPTFRAENSNTKRHLAEFWMVEPEM 250

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTV---------------------SNNFLRICYD 280
           +F E D  +   E+ L+ +F+                                F  + Y 
Sbjct: 251 AFCELDGNMEVAESFLKYLFKTVLEKCPEDMAFFSKFVEAGMEQTLQHIVETPFAHMTYT 310

Query: 281 DAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
           +A++           P+           S+ +   +        +   I        +AF
Sbjct: 311 EAVKELERHNELFEFPVAW--------GSDLQSEHEKFLTEVVCKRPVIVTDYPKEIKAF 362

Query: 341 CDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCF 400
             R+N  A  +   G+  +  RL E      +G   +  N+    A   +L +   D  +
Sbjct: 363 YMRLN--ADEKTVRGMDVLVPRLGE-----IIGGSEREANLDTLIARMQQLKLDPKDYWW 415

Query: 401 FI 402
           ++
Sbjct: 416 YL 417



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 33/222 (14%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L Y+F  + E          +K +     + ++  ++       +  A   L+  +   +
Sbjct: 266 LKYLFKTVLEKCPEDMAF-FSKFVEAGMEQTLQHIVETPFAHMTYTEAVKELERHNELFE 324

Query: 416 ARNHIAQEL------GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME-S 468
                  +L       +    C     + D+P     +E K        F M     E +
Sbjct: 325 FPVAWGSDLQSEHEKFLTEVVCKRPVIVTDYP-----KEIK-------AFYMRLNADEKT 372

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++G D+         LV    EI  G  R    + ++     + +  +            
Sbjct: 373 VRGMDV---------LVPRLGEIIGGSEREANLDTLIARMQQLKLDPKDYW----WYLDL 419

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            + G  PH G   G +R V  + G  N+R+V  +P +    D
Sbjct: 420 RRFGSVPHAGFGLGFERAVQYITGMGNIRDVIPYPRAPKLAD 461


>gi|223947835|gb|ACN28001.1| unknown [Zea mays]
          Length = 546

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 68/290 (23%), Positives = 116/290 (40%), Gaps = 31/290 (10%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVV------ANPDSACFE 60
             GDL  S  G  V + G    +RP    + F+ +R      Q V      A   +    
Sbjct: 85  HVGDLDDSAAGRSVLIRGAAQAIRPVSKKMAFVVLRQSMSTVQCVLVASADAGVSTQMVR 144

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA------------- 107
            A ++  E ++ ++G+V             T Q+E+  +KI  ++ A             
Sbjct: 145 FATALSKESIVDVEGVVSLPKEPL---KATTQQVEIQVRKIYCINRAIPTLPINLEDAAR 201

Query: 108 -----EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFI 162
                E+  L         +  R  YR +DLR  +       + ++ N  R  ++++NF+
Sbjct: 202 SEADFEKAELAGEKLVRVGQDTRLNYRAIDLRTPSNQAIFRIQCQVENKFRDFLLSKNFV 261

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
              TP L + S EG            G    L Q+PQ YKQ+ ++ GF+R F++ P FR 
Sbjct: 262 GIHTPKLISGSSEGGAAVFKLLYN--GQPACLAQSPQLYKQMAISGGFERVFEVGPVFRA 319

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVS 271
           E+  + R   EF  LD EM   E   ++ + ++ +   +F+  S      
Sbjct: 320 ENSNTHRHLCEFVGLDAEMEIKEHYFEVCDIIDGLFVSIFKHLSENCKKE 369



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 73/214 (34%), Gaps = 23/214 (10%)

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GL    ++         +  + +       + +   L +   +    +     +      
Sbjct: 353 GLFVSIFKHLSENCKKELESINRQYPFEPLKYLDKTLKLTYEEGIQMLKEAGTEIEP-MG 411

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           D      ++LG +    ++     DF F  +     +   A  PF               
Sbjct: 412 DLNTEAEKKLGRLVREKYD----TDF-FILY-----RYPLAVRPFYTMPCYD-------- 453

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
                  +D+   G EI SG  R H  E++ +  +  GI    +         +F  G+P
Sbjct: 454 NPAYTNSFDVFIRGEEIISGAQRIHTPELLAKRATECGIDVSTISA----YIESFSYGVP 509

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PHGG   G++R+VML     N+R+ SLFP     
Sbjct: 510 PHGGFGVGLERVVMLFCALNNIRKTSLFPRDPQR 543


>gi|226505476|ref|NP_001149817.1| LOC100283444 [Zea mays]
 gi|195634857|gb|ACG36897.1| aspartyl-tRNA synthetase [Zea mays]
          Length = 546

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 68/290 (23%), Positives = 116/290 (40%), Gaps = 31/290 (10%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVV------ANPDSACFE 60
             GDL  S  G  V + G    +RP    + F+ +R      Q V      A   +    
Sbjct: 85  HVGDLDDSAAGRSVLIRGAAQAIRPVSKKMAFVVLRQSMSTVQCVLVASADAGVSTQMVR 144

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA------------- 107
            A ++  E ++ ++G+V             T Q+E+  +KI  ++ A             
Sbjct: 145 FATALSKESIVDVEGVVSLPKEPL---KATTQQVEIQVRKIYCINRAIPTLPINLEDAAR 201

Query: 108 -----EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFI 162
                E+  L         +  R  YR +DLR  +       + ++ N  R  ++++NF+
Sbjct: 202 SEADFEKAELAGEKLVRVGQDTRLNYRAIDLRTPSNQAIFRIQCQVENKFRDFLLSKNFV 261

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
              TP L + S EG            G    L Q+PQ YKQ+ ++ GF+R F++ P FR 
Sbjct: 262 GIHTPKLISGSSEGGAAVFKLLYN--GQPACLAQSPQLYKQMAISGGFERVFEVGPVFRA 319

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVS 271
           E+  + R   EF  LD EM   E   ++ + ++ +   +F+  S      
Sbjct: 320 ENSNTHRHLCEFVGLDAEMEIKEHYFEVCDIIDGLFVSIFKHLSENCKKE 369



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 73/214 (34%), Gaps = 23/214 (10%)

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GL    ++         +  + +       + +   L +   +    +     +      
Sbjct: 353 GLFVSIFKHLSENCKKELESINRQYPFEPLKYLDKTLKLTYEEGIQMLKEAGTEIEP-MG 411

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           D      ++LG +    ++     DF F  +     +   A  PF               
Sbjct: 412 DLNTEAEKKLGRLVREKYD----TDF-FILY-----RYPLAVRPFYTMPCYD-------- 453

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
                  +D+   G EI SG  R H  E++ +  +  GI    +         +F  G+P
Sbjct: 454 NPAYTNSFDVFIRGEEIISGAQRIHTPELLAKRATECGIDVSTISA----YIESFSYGVP 509

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PHGG   G++R+VML     N+R+ SLFP     
Sbjct: 510 PHGGFGVGLERVVMLFCALNNIRKTSLFPRDPQR 543


>gi|145506673|ref|XP_001439297.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406481|emb|CAK71900.1| unnamed protein product [Paramecium tetraurelia]
          Length = 470

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 102/256 (39%), Gaps = 7/256 (2%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           FV ++G V  +R  G  ++F D++      QV+AN  +   +     +   ++   G ++
Sbjct: 119 FVSVAGRVVTIRSLGAKLMFYDLQGEGTQIQVMANEANHKDQELNFEKIHSLIK-RGDII 177

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT- 137
                        G++ ++   I++LS      LP           R++ R+LDL  +  
Sbjct: 178 GVKGNPCLTKA--GELSIAPGFIQLLSPTL-HMLPTTHFGFKDHEQRYRMRYLDLIMNKK 234

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           +    + R+ +I  +R     + FIE  TP L                 +      +  A
Sbjct: 235 VRDIFLARSSVIKQLREYFDGKGFIEVETPSLNVIQGGATAKPFKTFHNSLHRDLFMRVA 294

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y ++L+  G DR ++I   FR+E       P EF  ++   ++ + +D++   E VL
Sbjct: 295 PELYLKMLIVGGLDRVYEIGKNFRNEGIDQTHNP-EFTAMEFYWAYCDYNDLMTVTEEVL 353

Query: 258 RGVFEEFSNGNTVSNN 273
             +  +         +
Sbjct: 354 SQIVLKLKGSYKFKIH 369


>gi|291541007|emb|CBL14118.1| aspartyl-tRNA synthetase, archaeal type [Roseburia intestinalis
           XB6B4]
          Length = 443

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 70/311 (22%), Positives = 119/311 (38%), Gaps = 20/311 (6%)

Query: 1   MHRYRTHSCGDL-GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           +++  T   GDL   S  G  V+++G VH +R  G + F+ +R   G+ Q V       F
Sbjct: 7   VNKKETLEIGDLLTGSYEGKSVKVNGAVHTIRDMGEVAFIVLRKREGLLQCVYEEGKTQF 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV--AEELPLPVFGE 117
           ++ K ++    + ++G V                 E+   KI++LS   A         +
Sbjct: 67  DL-KDLKEAATIEVEGTV-------KPEERAPHGFEIRLDKIKVLSEPAAPMPLAISKWK 118

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                      R + LR          +  ++   R  +  + F E  TP + A S EG 
Sbjct: 119 LNTSLEANLNNRAIALRNIRERAKFRIQEGVVRGFRDFLYGQGFTEIHTPKIGAKSAEGG 178

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +       ++ +   L Q+PQ YKQ +M   FDR F+ AP FR E   + R   E+  L
Sbjct: 179 ANLFRLEYFHRPA--VLQQSPQFYKQ-MMVGVFDRVFETAPVFRAEKHNTKRHLNEYTSL 235

Query: 238 DMEMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           D EM +++  +DI+      L+ +              L +   +         P +R  
Sbjct: 236 DFEMGYIDGFEDIMAMETGFLQYMIALLKKDYAEELRLLGVTLPNV-----DKIPTVRFD 290

Query: 297 IIMHNVTEHFV 307
                V E + 
Sbjct: 291 EAKEKVAEKYH 301



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF            +         +DL+  G EI 
Sbjct: 329 DFVFVTHYP------------SKKRPFYAM--------DDPADPTYTLSFDLLYQGLEIT 368

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H    +++     G+  E +E         F+ GMPPHGG+  G++R+ M L+G
Sbjct: 369 TGGQRIHDYNKLMEKIEKRGMESEGMEQ----YLSVFKHGMPPHGGLGIGLERLTMKLVG 424

Query: 553 AKNVREVSLFPMSQNFCDL 571
             NVRE +LFP   +  + 
Sbjct: 425 EDNVRETTLFPRDLSRLEP 443


>gi|256026724|ref|ZP_05440558.1| lysyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289764720|ref|ZP_06524098.1| lysyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289716275|gb|EFD80287.1| lysyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 258

 Score =  163 bits (412), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 10/227 (4%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + +G +  +R  G   F  I D  G  Q+    D    E    +     +   G ++   
Sbjct: 40  KTAGRIMSLRGKGKAYFAHIEDQSGKIQIYMKKDELGEEQFDHIVKMLNV---GDIVGIE 96

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK- 140
            E    +  T ++ L  + I +L+      LP          IR++ R++DL  +   + 
Sbjct: 97  GELFITH--TEELTLRVKSISLLAK-NVRSLPEKYHGLTDVEIRYRKRYIDLIMNPEVRD 153

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQ 199
             +KRT II  +R  +    F+E  TP++        AR F+          Y L  A +
Sbjct: 154 IFIKRTEIIKEIRKYLDERGFLEVETPMMHQILGGAAARPFITHHNALNLDLY-LRIAVE 212

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            Y + L+  GFD+ +++   FR+E   S R   EF  +++  +  + 
Sbjct: 213 LYLKRLIVGGFDKVYEMGKDFRNEGI-SVRHNPEFTMIELYQAHADF 258


>gi|331224927|ref|XP_003325135.1| aspartate-tRNA ligase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309304125|gb|EFP80716.1| aspartate-tRNA ligase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 582

 Score =  163 bits (412), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 86/442 (19%), Positives = 159/442 (35%), Gaps = 68/442 (15%)

Query: 1   MHRYRTH----SCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA--- 52
           M + R +      G L    VG  VR+   VH  R     + FL +R      Q +    
Sbjct: 103 MSQERNYLNWVKIGSLQSDHVGERVRIQARVHNSRSQSAKLSFLVLRQQTSTIQAILGAT 162

Query: 53  --NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
             +      + A  +  E ++ ++G++     +    ++   ++E+   KI +L+ A   
Sbjct: 163 ETSVSKQMIKWAIGIPLESIVIVEGVIQKPIEDIKTCSVS--KLEIKLDKIFLLAQAPAK 220

Query: 111 PL-------------PVFGER--EYPESIRFKYRFLDLR----------RDTLHKNIVKR 145
                          P  GE+        R   R LDLR                    +
Sbjct: 221 LPFLLEDASRPVDVLPKEGEQFVTVGTDTRLDNRVLDLRNCDQRQKKMKTPVNQAIFRVQ 280

Query: 146 TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
           +R+ N  R  + +E+FIE  TP +  ++ E            Q +F A  Q+PQ  KQ+ 
Sbjct: 281 SRVCNLFRTFLDSEDFIEIHTPKIQGAATESGASVFKLGYFEQTAFLA--QSPQLAKQMA 338

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE-- 262
           +A+ F+R ++I P FR E+  + R   EF  LD+EM+  E   + ++ ++ +   +F+  
Sbjct: 339 IAADFERVYEIGPVFRAENSNTYRHMTEFIGLDLEMAIKEHYHEAVDLLDRLFISIFKGL 398

Query: 263 --------EFSNGNTVSNNF------LRICYDDAIRRY---------GTDKPDLRNPIIM 299
                   +        ++F      LR+ +  AI+           G D    +  I+ 
Sbjct: 399 QASSAPEIQTIKSQHPVDDFIFLEKTLRLQHSQAIQILIDHGIDIQIGQDMGTEQERILG 458

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW---ARSQGQPGL 356
             + E +    + +    L++ P Y +          +  F  R  E    A+    P L
Sbjct: 459 KLIKEKYQTDYYIIDKFPLAIRPFYTMPDPVDPTSSNSYDFFMRGEEIISGAQRIHAPEL 518

Query: 357 AYIFWRLDESGNVAGMGPVAKH 378
                +  +       G +   
Sbjct: 519 LIERMKEAKIDPKEMKGYLDGF 540



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 70/206 (33%), Gaps = 33/206 (16%)

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E   +    PV   + +  T    +RL            G  ++             + L
Sbjct: 405 EIQTIKSQHPVDDFIFLEKT----LRLQHSQAIQILIDHGIDIQIGQDMG---TEQERIL 457

Query: 425 G-IINCNCFEFCWIMD-FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           G +I        +I+D FP             A  PF              +    +  Y
Sbjct: 458 GKLIKEKYQTDYYIIDKFPL------------AIRPFYTMPD--------PVDPTSSNSY 497

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           D    G EI SG  R H  E++++      I  + ++    G    F+ G P H G   G
Sbjct: 498 DFFMRGEEIISGAQRIHAPELLIERMKEAKIDPKEMK----GYLDGFKLGCPAHAGGGIG 553

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNF 568
           ++R+VML  G  N+R+  LFP     
Sbjct: 554 LERVVMLFFGLGNIRKACLFPRDPRR 579


>gi|328868550|gb|EGG16928.1| asparagine-tRNA ligase [Dictyostelium fasciculatum]
          Length = 512

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 66/364 (18%), Positives = 116/364 (31%), Gaps = 65/364 (17%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           S VG  V + GW+  +R      F ++ D   +  +        F              +
Sbjct: 61  SKVGDIVTVKGWIKNMRHQKQFSFAELTDGSCVQGLQVIGTPQHFAE----------TTN 110

Query: 75  GLVMSRSAETINANIITGQIELS------------AQKIEILSVAEELPLPVFGEREYPE 122
           G  +S + +   +      +E+                +++L   ++   P+  ++   E
Sbjct: 111 GCCVSVTGKLTQSPGKNQSLEIQLFDEQQSSGDNTTSGVKVLGKCDDSEYPLQPKQHSFE 170

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +R     L  R +T+   I  R    + +        F    TP++TAS  EG  +   
Sbjct: 171 FLR-DIAHLRSRSNTIGAMIRVRNESTSLIHTYFQDRQFQHVHTPLITASDCEGGGEQFA 229

Query: 183 -----------------PSRVNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
                             +      F+   A      Q +  + AS   R +   P FR 
Sbjct: 230 ISTPVNHPNNNKENNKATTTPAVNHFFGEPAYLTVSGQLEAEIFASSHSRVYTFGPSFRA 289

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS----------- 271
           E   + R   EF+ ++ EMSF+   D L+  E+ L+   +                    
Sbjct: 290 EKSNTTRHLSEFWMVEPEMSFINMQDNLDIAEDFLKYTIQHLMTNCKDDMEFFNKLEKTL 349

Query: 272 -NNFLRICYDDAIRRY-GTDKPDLRNPIIMHN---------VTEHFVHSEFRVFSKILSV 320
            N F+R+ Y +AI            NPI             +T HF      V +    +
Sbjct: 350 TNRFVRLPYTEAIDILTKQTSTKFANPIKWGEDLSREHEKYLTSHFGDIPVFVINWPKDI 409

Query: 321 NPGY 324
            P Y
Sbjct: 410 KPFY 413



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 24/134 (17%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             +++++P        K I     PF M +        ND     A    LV    E+  
Sbjct: 399 PVFVINWP--------KDIK----PFYMRE--------NDDGQTVANMDLLVPEVGELIG 438

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G IR    + +++  + + +     ++ +G      + G  PHGG   G +R +  + G 
Sbjct: 439 GSIREERYDHLVKRLNKLDMD----QDVYGWYMDLRKYGSAPHGGFGLGFERFLQYVTGL 494

Query: 554 KNVREVSLFPMSQN 567
           +N+R+V   P  QN
Sbjct: 495 QNIRDVIPIPRHQN 508


>gi|332291340|ref|YP_004429949.1| asparaginyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169426|gb|AEE18681.1| asparaginyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 480

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 102/294 (34%), Gaps = 33/294 (11%)

Query: 6   THS--CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA- 62
           TH+     L    +     + GWV   R +    F+ + D   I  +    D    + A 
Sbjct: 2   THTPIIALLESDKIHQEFTVKGWVRSFRGNQ---FIALNDGSTINNLQCVVDFENTDEAL 58

Query: 63  -KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--FGERE 119
            K + +   + I G +               +IE+  + I+I   A+   L       + 
Sbjct: 59  LKRITTGAAVAIKGTLEESQGGG-------QRIEIKVKDIQIEGDADPQELKNTILSPKR 111

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           +      +   L +R +T    +  R+++  ++        +    TPI+T S  EGA +
Sbjct: 112 HTLEKLREQAHLRVRTNTFGAVMRLRSKLSFAIHEYFNKNGYFHAHTPIITGSDAEGAGE 171

Query: 180 FLVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRD 222
               S ++                 F+          Q +    A G  + +   P FR 
Sbjct: 172 MFRVSALDPENPPRTEDGKIDYSKDFFGKETNLTVSGQLEGETYALGLGKIYTFGPTFRA 231

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           E+  + R   EF+ ++ EM+F + D  ++  E+ ++ V             FL 
Sbjct: 232 ENSNTSRHLAEFWMVEPEMAFCDLDGNMDLAEDFIKYVINYALENCQDDLEFLE 285



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M           D  +++A   D++  G  E+  G  R    +V+ +  +
Sbjct: 372 DYPANIKAFYMR-------LNEDGKTVRAM--DVLFPGIGEMVGGSQREERLDVLKEKMA 422

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            + IS    E          + G   H G   G +R+V+ + G  N+R+V  +P 
Sbjct: 423 ALDIS----EEELSWYLDTRKFGTCTHSGFGLGFERLVLFVTGMTNIRDVIPYPR 473


>gi|86140788|ref|ZP_01059347.1| asparaginyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85832730|gb|EAQ51179.1| asparaginyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 479

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 50/286 (17%), Positives = 107/286 (37%), Gaps = 31/286 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEW 69
           L     G  + + GWV   R +    F+ + D   +  +    D      E+ K +    
Sbjct: 9   LKEEPKGHELTVKGWVRSFRANR---FIALNDGSTLNNLQCVVDFENTDPELLKRITVGA 65

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--VFGEREYPESIRFK 127
            + + G ++               +E+ A++I+IL  A+   +   +   + +      +
Sbjct: 66  AIAVTGNLIESQGGGQA-------VEVEAKEIKILGDADPEEVKKTILSPKRHTLEKLRE 118

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
              L +R +T    +  R+++  ++      E F   +TPI+T S  EGA +    + ++
Sbjct: 119 QAHLRVRTNTFGAVMRLRSQLSFAVHQYFQKEGFYYVNTPIVTGSDAEGAGEMFKVTALD 178

Query: 188 QG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                            F+          Q +    A G  + +   P FR E+  + R 
Sbjct: 179 MKNPPKDEDGNIDYKKDFFGKETNLTVSGQLEGETYALGLGQIYTFGPTFRAENSNTSRH 238

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
             EF+ ++ E++F + D  ++  E+ ++ V +   +       FL 
Sbjct: 239 LAEFWMIEPEVAFCDLDMNMDLAEDFIKYVIQFVMDNCQDDLKFLE 284



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 41/115 (35%), Gaps = 14/115 (12%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M           D  +++A   D++  G  EI  G  R    EV+ +  +
Sbjct: 371 DYPANIKAFYMR-------LNEDGKTVRAM--DILFPGIGEIVGGSQREERLEVLQEKMA 421

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            + I     E          + G   H G   G +R+V+   G  N+R+V  +P 
Sbjct: 422 ALDIP----EEELWWYLDTRRFGSCVHSGFGLGFERLVLFATGMTNIRDVIPYPR 472


>gi|149180413|ref|ZP_01858918.1| lysyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148852605|gb|EDL66750.1| lysyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 477

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/266 (21%), Positives = 111/266 (41%), Gaps = 10/266 (3%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +R +G +  +R    ++F+ I D  G  Q++         +       + +   G  +  
Sbjct: 38  IRAAGRITGIRSFSKLLFITISDIQGSLQLLLKKQEIGEGLFNKFEQFFDI---GDFIGV 94

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139
             +       TG+  L  +K E L  A   PLP          +R++ R+LD L  +   
Sbjct: 95  EGKMYTTK--TGEKTLRIEKYEFLGKALR-PLPEKWHGISNIELRYRQRYLDMLMTEETQ 151

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAP 198
             ++ R++++ S+R     ++FIE  TP+L  +S    A+ F             L  AP
Sbjct: 152 NRVLARSQMVRSIRRFFEDQDFIEVETPVLQHTSSGALAKPFKTYHNALDTEL-NLRIAP 210

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + Y + L+  G+ + F++A CFR+E   S +   EF  ++   +F   +D +  M  ++ 
Sbjct: 211 ETYLKRLIVGGYTKIFEVAKCFRNEGV-SPQHLQEFTMVEGYAAFWNYEDTMRLMRKMIL 269

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIR 284
            V +   N  T++     I +     
Sbjct: 270 SVLQNTFNTTTITLKGQSIDFTAEWD 295



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 4/102 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGL 525
           + ND       ++ LV NG EI +            +      + K              
Sbjct: 375 RANDEDPSLTDRFQLVVNGAEIINAYSELVDPLEQRKRLEVQALLKSNGDAEAMEMDEDY 434

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            +A + GMPP  G   G++R++M+L  ++++++   FP+++ 
Sbjct: 435 LKAMEYGMPPISGWGFGVERLLMILTDSESIKDCVFFPLTKK 476


>gi|330443849|ref|YP_004376835.1| lysyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328806959|gb|AEB41132.1| lysyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 521

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 60/321 (18%), Positives = 125/321 (38%), Gaps = 28/321 (8%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAKSVRSEWVLCID---- 74
            V+ +G +   R  G   F  + DH    QV+ N D +    ++K      +  I+    
Sbjct: 65  RVKFAGRLVLFRSMGKNAFGQLLDHSQKIQVMFNRDFTHVAGLSKDAGISSIKFIEKKLD 124

Query: 75  -GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    E       +G++ +  + + +L  +  + LP        + +R++ R+LDL
Sbjct: 125 LGDILGI--EGFLFFTHSGELTVLVETVTLLCKSL-ISLPDKHAGLSDKEVRYRKRWLDL 181

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSF 191
                +    V+R+RII  +R  M ++ ++E  TPIL +      AR F           
Sbjct: 182 ICSQEVSNVFVQRSRIIKLIREYMDSQGYLEVETPILQSIYGGAEARPFTTELEALHTEM 241

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + L  + +   + ++  G  + ++I   FR+E       P EF  ++   ++++   ++ 
Sbjct: 242 F-LRISLEIALKKILVGGAPKIYEIGKVFRNEGIDRTHNP-EFTMIEAYTAYMDYHGVME 299

Query: 252 TMENVLRGV---------------FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
            +EN++  V               ++E          + R+   ++I+ YG    DL   
Sbjct: 300 FVENLVEYVVRSLNHGSTVITYSHWKEGPQQVDFKAPWKRMTMKESIKEYGGVDVDLYGD 359

Query: 297 IIMHNVTEHFVHSEFRVFSKI 317
             +  +           F K 
Sbjct: 360 AELREIVRTKTSLPEESFIKA 380



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 10/124 (8%)

Query: 452 IDFAHNPFTMPQGGME---SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           +   H+    P        SL+  D   +   +++  C G E+ +     +   V  +  
Sbjct: 398 LIAPHHITDHPIETTPLCKSLRSGDPTYV--ERFESFCLGKELCNAYSELNDPIVQRKLL 455

Query: 509 SNVGISKEVVENRFGG-----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               + KE                A   GMPP GG   GIDR+VM+L  + ++R+V  FP
Sbjct: 456 EEQQLRKEQNPESECHPIDEEFLEALCQGMPPSGGFGIGIDRLVMILTDSASIRDVLYFP 515

Query: 564 MSQN 567
           + + 
Sbjct: 516 VMRR 519


>gi|124513716|ref|XP_001350214.1| lysine-tRNA ligase [Plasmodium falciparum 3D7]
 gi|23615631|emb|CAD52623.1| lysine-tRNA ligase [Plasmodium falciparum 3D7]
          Length = 583

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/335 (18%), Positives = 122/335 (36%), Gaps = 20/335 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           + +Y+    G+       + + ++G + RV   G  + F D+       QV+AN      
Sbjct: 116 IEKYKDLGNGE---HLEDTILNITGRIMRVSASGQKLRFFDLVGDGEKIQVLANYSFHNH 172

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E          +    +V              G++ +  ++  +LS    +    +G ++
Sbjct: 173 EKGNFAECYDKIRRGDIVGIVG---FPGKSKKGELSIFPKETILLSACLHMLPMKYGLKD 229

Query: 120 YPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
               IR++ R+LDL   ++     V RT+IIN +R  +    F E  TP++   +    A
Sbjct: 230 T--EIRYRQRYLDLLINESSRHTFVTRTKIINFLRNFLNERGFFEVETPMMNLIAGGANA 287

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R F+          Y L  A +   ++L+  G D+ ++I   FR+E   +   P EF   
Sbjct: 288 RPFITHHNDLDLDLY-LRIATELPLKMLIVGGIDKVYEIGKVFRNEGIDNTHNP-EFTSC 345

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +   ++ + +D++   E+    +               +I Y+         + D   P 
Sbjct: 346 EFYWAYADYNDLIKWSEDFFSQLVYHLFGTY-------KISYNKDGPENQPIEIDFTPPY 398

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
              ++ E        +  +    N   E      K
Sbjct: 399 PKVSIVEEIEKVTNTILEQPFDSNETIEKMINIIK 433



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 8/131 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F E    +K      +P  M                   + ++   G E+ +     +  
Sbjct: 456 FIENKYNDKPFFIVEHPQIMSPLAKYHRTKP----GLTERLEMFICGKEVLNAYTELNDP 511

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAF----QCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E  +     L  AF    + G+PP GG+  GIDRI M L    +++
Sbjct: 512 FKQKECFKLQQKDREKGDTEAAQLDSAFCTSLEYGLPPTGGLGLGIDRITMFLTNKNSIK 571

Query: 558 EVSLFPMSQNF 568
           +V LFP  +  
Sbjct: 572 DVILFPTMRPA 582


>gi|77918200|ref|YP_356015.1| asparaginyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|77544283|gb|ABA87845.1| asparaginyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 468

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 71/342 (20%), Positives = 117/342 (34%), Gaps = 50/342 (14%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + GWV  VR    + F+ + D   +   QVV  P+   F            C  G  M  
Sbjct: 29  VCGWVRSVRRGKEVTFIALNDGSCMANLQVVLTPEVDGFATVSR-------CGTGAAMQV 81

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             E I +     + EL A++++IL   +    P+  +R   E +R     L  R +T   
Sbjct: 82  EGELIASPAAGQEWELHARQVKILGDTDSDY-PLQKKRHSFEFLR-SIAHLRPRANTFGA 139

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----------- 189
               R+ +  ++        F+   TPI+TA+  EGA +    S +              
Sbjct: 140 VFRMRSALSFAIHRFFRERGFLYVHTPIITANDCEGAGEMFRVSTLPADRPPLTEGKIDW 199

Query: 190 --SFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              F+          Q +  L A+ F   +   P FR E+  + R   EF+ ++ E++F 
Sbjct: 200 RQDFFGEKTGLTVSGQLQGELFATAFSDIYTFGPTFRAENSHTSRHAAEFWMIEPEIAFA 259

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RICYDDAI 283
           +  D     E  LR +     +       F                       + Y +AI
Sbjct: 260 DLADDCALAEEFLRYLVRFALDECGEDLAFFNQRIEPGLIDKLETLARADFSVMTYSEAI 319

Query: 284 RRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSKILSVNPG 323
           RR      D   P+       +EH  +   +V    L V   
Sbjct: 320 RRLQQAPVDFEYPVAWGADLQSEHERYLTEQVVGGPLFVTDY 361



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 48/133 (36%), Gaps = 24/133 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             ++ D+P                 F M        + ND     A    LV    EI  
Sbjct: 355 PLFVTDYP------------ADIKAFYM--------RLNDDGRTVAAMDLLVPRVGEIIG 394

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  R    +V++   ++VGI                + G  PH G   G +R++M + G 
Sbjct: 395 GSQREERLDVLMGKMNSVGIEA----QHLDWYLDTRRWGSCPHAGFGLGFERLLMYVTGM 450

Query: 554 KNVREVSLFPMSQ 566
           +N+R+V  FP + 
Sbjct: 451 ENIRDVIPFPRTP 463


>gi|298345631|ref|YP_003718318.1| lysine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|298235692|gb|ADI66824.1| lysine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
          Length = 521

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/275 (19%), Positives = 111/275 (40%), Gaps = 19/275 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFE 60
            +Y     G+     VG    L+G V  +R  G + F  +++  G   Q++ +      E
Sbjct: 64  EKYSDLQAGEETAEFVG----LAGRVRLMRSSGKLAFATLQEGNGSTIQIMISEREVGPE 119

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF----- 115
              + ++E  L   G  +      I++    G++ +     ++   A       +     
Sbjct: 120 SMSAYKAEVDL---GDHLFVHGRVISSK--RGELSIFVDSWQLTCKALRPLPKSYINEAG 174

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
            E    E +R + R LD+      +++V+ R+R++ ++R  +   ++IE  TP+L     
Sbjct: 175 EEVSLSEDMRVRRRDLDMIMRPAARDMVRNRSRVVQTLRRYLDEHDYIEVETPMLQTLHG 234

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  AP+ + +  +  G D+ F+I   FR+E   S   P E
Sbjct: 235 GAAARPFVTHMNAYDTELY-LRIAPELFLKRCLIGGIDKVFEINRNFRNEGADSSHSP-E 292

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           F  L++  ++ +   I    + +++    +     
Sbjct: 293 FTMLEVYCAYGDYHQIARLTQEMIQRCARDVFGTE 327



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 26/147 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            ++    +E  ++ DFP     E+   +   H                     +  ++DL
Sbjct: 396 ELVGDKLWEPTFVCDFP-----EDTSPLVKTH----------------PDKPGQVQKWDL 434

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIA 540
           +  GFE+A+G    +   V    F    +                  + + GMPP GG+ 
Sbjct: 435 IIRGFEVATGYSELNDPVVQRARFEQQALDAANGDPEAMEVDEDFLISMEQGMPPAGGMG 494

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G+DR++M L G+  +RE   FP+ + 
Sbjct: 495 MGLDRLLMTLTGSG-IRETITFPLVKR 520


>gi|315657872|ref|ZP_07910752.1| lysine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315491669|gb|EFU81280.1| lysine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 521

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/275 (19%), Positives = 111/275 (40%), Gaps = 19/275 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFE 60
            +Y     G+     VG    L+G V  +R  G + F  +++  G   Q++ +      E
Sbjct: 64  EKYSDLQAGEETAEFVG----LAGRVRLMRSSGKLAFATLQEGNGSTIQIMISEREVGPE 119

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF----- 115
              + ++E  L   G  +      I++    G++ +     ++   A       +     
Sbjct: 120 SMSAYKAEVDL---GDHLFVHGRVISSK--RGELSIFVDSWQLTCKALRPLPKSYINEAG 174

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
            E    E +R + R LD+      +++V+ R+R++ ++R  +   ++IE  TP+L     
Sbjct: 175 EEVSLSEDMRVRRRDLDMIMRPAARDMVRNRSRVVQTLRRYLDEHDYIEVETPMLQTLHG 234

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  AP+ + +  +  G D+ F+I   FR+E   S   P E
Sbjct: 235 GAAARPFVTHMNAYDTELY-LRIAPELFLKRCLIGGIDKVFEINRNFRNEGADSSHSP-E 292

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           F  L++  ++ +   I    + +++    +     
Sbjct: 293 FTMLEVYCAYGDYHQIARLTQEMIQRCARDVFGTE 327



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 26/147 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            ++    +E  ++ DFP     E+   +   H                     +  ++DL
Sbjct: 396 ELVGDKLWEPTFVCDFP-----EDTSPLVKTH----------------PDKPGQVQKWDL 434

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIA 540
           +  GFE+A+G    +   V    F    +                  + + GMPP GG+ 
Sbjct: 435 IIRGFEVATGYSELNDPVVQRARFEQQALDAANGDPEAMEVDEDFLISMEQGMPPAGGMG 494

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G+DR++M L G+  +RE   FP+ + 
Sbjct: 495 MGLDRLLMTLTGSG-IRETITFPLVKR 520


>gi|78223615|ref|YP_385362.1| asparaginyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|123770257|sp|Q39SY7|SYN_GEOMG RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|78194870|gb|ABB32637.1| Asparaginyl-tRNA synthetase, class IIb [Geobacter metallireducens
           GS-15]
          Length = 461

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 128/377 (33%), Gaps = 53/377 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEW 69
           L    +G+ + + GWV  +R    + FL + D       QVVA P  A F    ++ +  
Sbjct: 11  LAGEGLGNEIMVKGWVRTIRTGKEVAFLALNDGSCFANLQVVAEPGLATFADVCAIGTGA 70

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G ++   A            EL A ++ ++ +A+E   P+  +R   E +R    
Sbjct: 71  AVAVRGRLVDSPASGQC-------YELHADEVAVIGLADE-SYPLQKKRHSFEYLR-SIA 121

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L  R +T       R+ +  ++        F+   TPI+T S  EGA +    + ++  
Sbjct: 122 HLRPRSNTFGAVFRVRSSVAQAVHRFFAERGFLYVHTPIITTSDCEGAGEMFRVTTLDPA 181

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+A         Q +  L A  F   +   P FR E+  + R   E
Sbjct: 182 APPLLEGEVDFSRDFFAAQAGLTVSGQLEGELFAQAFSDIYTFGPTFRAENSNTPRHAAE 241

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD------------- 280
           F+ ++ EM+F +        E   R +     +       F     D             
Sbjct: 242 FWMIEPEMAFADLMADAALAEEFFRYLCRHVLDACGEDMAFFNDHIDKGLIARVEQVANS 301

Query: 281 -DAIRRYGTDKP-------DLRNPII--MHNVTEHFVHSEFRVFSK---ILSVNPGYEVW 327
             AI  YG               P+   +   TEH  +   +V      +++     + +
Sbjct: 302 SFAIMEYGEAIERLKKATVTFEYPVEWGLDLQTEHERYLTEQVVGGPVFVINYPKHIKAF 361

Query: 328 AIPAKGGGGNRAFCDRM 344
            +         A  D +
Sbjct: 362 YMRVNDDNKTVAAMDLL 378



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 4/99 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    LV    EI  G  R     V+    + VG++             +
Sbjct: 363 MRVNDDNKTVAAMDLLVPKVGEIIGGSQREERLPVLEGRMAEVGVNP----EGLWWYLDS 418

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++M L G +N+R+V  FP +  
Sbjct: 419 RRWGSTPHAGFGLGFERLIMYLTGMENIRDVIPFPRTPR 457


>gi|126652720|ref|XP_001388377.1| aspartate--tRNA ligase [Cryptosporidium parvum Iowa II]
 gi|126117470|gb|EAZ51570.1| aspartate--tRNA ligase [Cryptosporidium parvum Iowa II]
          Length = 532

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/286 (20%), Positives = 118/286 (41%), Gaps = 24/286 (8%)

Query: 5   RTHS-CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIA 62
           RT S   +L  +  G  + L G +   R  G + F+ +R  +   Q+V + ++ +  E+ 
Sbjct: 71  RTFSKIKELNSNQKGEKIWLRGRITESRCKGSLGFVLLRQTFYRLQLVVDANNGSSKEMI 130

Query: 63  K---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER- 118
           K    +  E ++ + G ++      +++   T  IE+  +++  +S A         +  
Sbjct: 131 KWLGCLPIESMIDVYGTIVVPETPVVSS---TQDIEVLVERVYCVSSACSELPFQLKDAN 187

Query: 119 ------------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                       +  + +R   R LDLR          ++ +   +R  +I   FIE  T
Sbjct: 188 RVETEDEDSTIIKVLQDVRLDNRVLDLRTYLSQAIFRIQSEVCRLLREFLIEREFIEIHT 247

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P L   + E           +  +   L Q+PQ +KQ+ +    +R F+I P FR E+  
Sbjct: 248 PKLLPGASESGATVFKVDYFSNTA--CLAQSPQLHKQMSICGDLERVFEIGPVFRAENSN 305

Query: 227 SDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVS 271
           + R   EF  +D+EM+      ++++  + + R +F+  +      
Sbjct: 306 THRHLCEFVGVDIEMNIENTYHELVDVFDAMFRHIFQGINTHCKNE 351



 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF       E  K        +  +D    G EI SG  R H  +++++    
Sbjct: 423 KYPLKVRPFYTMPDFDEPEK-------WSNSFDFFMRGEEILSGAQRVHDYDLLVKRCQE 475

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+S+  + +       +F+ G PPHGG   G++R++ML L   N+R+ S+FP       
Sbjct: 476 CGVSEHSLRD----YLNSFKLGAPPHGGCGIGLERVIMLFLNLGNIRKSSMFPRDPKRLS 531

Query: 571 L 571
            
Sbjct: 532 P 532


>gi|304390680|ref|ZP_07372633.1| lysine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304326436|gb|EFL93681.1| lysine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 521

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/275 (19%), Positives = 111/275 (40%), Gaps = 19/275 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFE 60
            +Y     G+     VG    L+G V  +R  G + F  +++  G   Q++ +      E
Sbjct: 64  EKYSDLQAGEETAEFVG----LAGRVRLMRSSGKLAFATLQEGNGSTIQIMISEREVGPE 119

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF----- 115
              + ++E  L   G  +      I++    G++ +     ++   A       +     
Sbjct: 120 SMSAYKAEVDL---GDHLFVHGRVISSK--RGELSIFVDSWQLTCKALRPLPKSYINEAG 174

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
            E    E +R + R LD+      +++V+ R+R++ ++R  +   ++IE  TP+L     
Sbjct: 175 EEVSLSEDMRVRRRDLDMIMRPAARDMVRNRSRVVQTLRRYLDEHDYIEVETPMLQTLHG 234

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  AP+ + +  +  G D+ F+I   FR+E   S   P E
Sbjct: 235 GAAARPFVTHMNAYDTELY-LRIAPELFLKRCLIGGIDKVFEINRNFRNEGADSSHSP-E 292

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           F  L++  ++ +   I    + +++    +     
Sbjct: 293 FTMLEVYCAYGDYHQIARLTQEMIQRCARDVFGTE 327



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 26/147 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            ++    +E  ++ DFP     E+   +   H                     +  ++DL
Sbjct: 396 ELVGDKLWEPTFVCDFP-----EDTSPLVKTH----------------PDKPGQVQKWDL 434

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIA 540
           +  GFE+A+G    +   V    F    +                  + + GMPP GG+ 
Sbjct: 435 IIRGFEVATGYSELNDPVVQRARFEQQALDAANGDPEAMEVDEDFLISMEQGMPPAGGMG 494

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G+DR++M L G+  +RE   FP+ + 
Sbjct: 495 MGLDRLLMTLTGSG-IRETITFPLVKR 520


>gi|302882325|ref|XP_003040073.1| hypothetical protein NECHADRAFT_96752 [Nectria haematococca mpVI
           77-13-4]
 gi|256720940|gb|EEU34360.1| hypothetical protein NECHADRAFT_96752 [Nectria haematococca mpVI
           77-13-4]
          Length = 812

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 139/353 (39%), Gaps = 29/353 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACF 59
           +H    ++   L    +G+ V     +   RP   ++ FL +RD     Q V   D+   
Sbjct: 48  VHPGEINTVAQLDTLPIGTEVTFRARIETQRPLSKVLDFLLLRDQTHSVQGVLARDADNA 107

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +         ++ + G ++ +  + I +   +G +E+    + +++ A       F   +
Sbjct: 108 DF-------SLVQVSG-ILKQPPQPIRSATHSG-VEVDICSVHLVNPA---QNLPFSNYK 155

Query: 120 YPESIRFKY--RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
            PE++R +   R LDLR  +       R+ +    R  +    F+E  TP L  ++ E  
Sbjct: 156 PPETLRNRMSSRILDLRHPSNQALFRVRSMVSRVFRNTLEQYGFVEIHTPKLQPAATESG 215

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                 +   + +F A  Q+PQ  KQ+ +++ F R F++ P FR E+  + R   E+  L
Sbjct: 216 AAVFPVNYFGRRAFLA--QSPQLAKQMSISADFGRVFEVGPVFRAENSNTHRHLTEYTGL 273

Query: 238 DMEMSF-VEQDDILNTMENVLRGVFE--------EFSNGNTVSNNFLRICYDDAIRRYGT 288
           D+EM+   +  +++  ++  L+ VF         E       S  F  +  +  I  +  
Sbjct: 274 DLEMAIDSDYHEVIQFIDIFLKEVFRTVYSSRELEVIRKRWPSGEFKWLD-ETPIIPFSE 332

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
               LR+     +V E  + +   +    L        + +  K     R F 
Sbjct: 333 GLQMLRDD--GRDVEEEDLSTPDEIRLGQLVREKYNTDYYVLDKFPANARPFY 383



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 14/132 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF   +         D    ++  +D+   G EI SGG R H  E +    + 
Sbjct: 374 KFPANARPFYTAKD------PEDPKWTRS--FDIFIRGQEICSGGQRIHNVEELRANMAA 425

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+S++ +E+       AF+ G PPH G   G++RIV  +L   +VR  SLF        
Sbjct: 426 AGMSEDGMED----YLTAFELGAPPHAGAGLGLERIVAWMLELGDVRYASLFHRDPKS-- 479

Query: 571 LLMGSPSTVSVE 582
           L   +P     E
Sbjct: 480 LPTKAPGLPHPE 491


>gi|170115146|ref|XP_001888768.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636244|gb|EDR00541.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 560

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 71/293 (24%), Positives = 120/293 (40%), Gaps = 26/293 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             VR+ GWVHR+R    IIF+ +RD  G  Q V +   A    A ++  E  + + G + 
Sbjct: 129 KRVRVFGWVHRLRQQKDIIFIVVRDGTGYLQTVLSGRVAQTYEALTLTLESSVEVVGTLQ 188

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +            G  EL      ++  A   E         +   SI+   R L LR +
Sbjct: 189 TVPEG----KTAPGGHELVVDYWRVVGPAPGAEDAFTNRLNEKSDPSIQADLRHLVLRGE 244

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T    +  R  ++ + R  + A++ IE + P L  +  EG           Q +F  L Q
Sbjct: 245 TASSVLRLRAALLIAFRDSLTAQSLIEVTPPCLVQTQVEGGATLFKLDYYGQPAF--LTQ 302

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  + S     F +   FR E+  + R   E+  L+ E++F+   D+++ +E +
Sbjct: 303 SSQLYLETCLPS-LGDVFCVQESFRAENSHTRRHLSEYTHLEAELAFITFTDLMDHIEEI 361

Query: 257 LRG-------------VFEEFS-NGNTVSNNFLRICYDDAIRR---YGTDKPD 292
           +               + +  + N  T S  FLR+ Y DAI+    +G   P 
Sbjct: 362 ICNTVSILLANPTSASLIKSLNPNFITPSRPFLRLSYVDAIKWLNAHGIKHPK 414



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 47/136 (34%), Gaps = 14/136 (10%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL-VCNGFEIASGG 495
           I+  P + +             F M +      +G    ++     DL + N  EI  G 
Sbjct: 438 IIGTPVFLY-----GFPAELKAFYMKKMP----QGEGETTVFTESCDLLMPNVGEIVGGS 488

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           +R    E +L A+   GI        +       + G   HGG   G++R +  L     
Sbjct: 489 MRIADMEELLAAYKREGIDP----EPYYWFTDQRKYGTCEHGGYGLGVERFLAWLANRYT 544

Query: 556 VREVSLFPMSQNFCDL 571
           VRE SL+P        
Sbjct: 545 VRECSLYPRWPGRATP 560


>gi|159040202|ref|YP_001539455.1| lysyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157919037|gb|ABW00465.1| lysyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 502

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 114/283 (40%), Gaps = 20/283 (7%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD 55
           RT +  ++          +  G  V ++G V  +R  G + F  +RD  G   Q + + D
Sbjct: 43  RTSTLAEIRQGYADLPTDTATGDRVSVTGRVIFIRNTGKLCFATLRDGDGTELQAMLSLD 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                 A+ +     L   G ++  + E I +    G++ + A++  + + A        
Sbjct: 103 RVG---AQRLEDWKRLVDLGDLVGVTGEVITSR--RGELSVLAEEWAVTAKALRPLP--V 155

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSP 174
             +   E  R + R++DL      + +V+ R   + S+R  +    F+E  TP+L     
Sbjct: 156 AHKPLSEEARVRQRYVDLIVRPQARQMVRTRATAVRSLRESLHERGFLEVETPMLQLLHG 215

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  G D  F+I   FR+E   S   P E
Sbjct: 216 GATARPFVTHSNALSSDLY-LRIAPELFLKRALVGGIDHIFEINRNFRNEGVDSSHSP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           F  L+   ++ + D I +   ++++           V++   R
Sbjct: 274 FAMLEAYQAYGDYDTIGDLTRHLVQQAALAVGGSTVVTHADGR 316



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 55/151 (36%), Gaps = 28/151 (18%)

Query: 419 HIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +A+EL   ++        ++ D+P     EE   +  AH                    
Sbjct: 369 KLAEELFEELVVPGLLAPTFVRDYP-----EETSPLVRAHRA----------------EP 407

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               ++DL   GFE+ +G        +  +             +          RA + G
Sbjct: 408 GLTEKWDLYVLGFELGTGYSELVDPVIQRERLVAQAQLAARGNDEAMRLDEDFLRAMEYG 467

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP GG+  GIDR++M L G   +RE  LFP
Sbjct: 468 MPPSGGMGMGIDRLLMALTGLG-IRETILFP 497


>gi|225375172|ref|ZP_03752393.1| hypothetical protein ROSEINA2194_00796 [Roseburia inulinivorans DSM
           16841]
 gi|225212982|gb|EEG95336.1| hypothetical protein ROSEINA2194_00796 [Roseburia inulinivorans DSM
           16841]
          Length = 443

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 67/308 (21%), Positives = 117/308 (37%), Gaps = 20/308 (6%)

Query: 1   MHRYRTHSCGDLGVSD-VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           +++  T    ++   D  G  V+++G VH +R  G + F+ +R   G+ Q V       F
Sbjct: 7   VNKKDTVEISEILAGDFEGKTVKVNGAVHTIRDMGEVAFVVLRKREGLLQCVFEEGKTKF 66

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGE 117
           ++ K ++    + ++G V S               E+    I +LS  VA         +
Sbjct: 67  DL-KDLKEAATVEVEGAVKSEDR-------APNGFEIRLDSIRVLSEPVAPMPLAISKWK 118

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                      R + LR          +  ++   R  +  + F E  TP + A   EG 
Sbjct: 119 LNTSLEANLNNRSIALRNIRERAKFKIQEGVVRGFRDFLYEQGFTEIHTPKIGAKGAEGG 178

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +       ++ +  A  Q+PQ YKQ +M   FDR F+ AP FR E   + R   E+  L
Sbjct: 179 ANMFRMDYFHRPAVLA--QSPQFYKQ-MMVGVFDRVFETAPVFRAEKHNTKRHLNEYTSL 235

Query: 238 DMEMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           D EM +++  +DI+      L+ + +            L +   +         P +R  
Sbjct: 236 DFEMGYIDGFEDIMAMETGFLQYMVDLLKKDYEKELKILGVTLPNV-----DKIPTVRFD 290

Query: 297 IIMHNVTE 304
                V E
Sbjct: 291 EAKRKVAE 298



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF            +         +DL+ +G EI 
Sbjct: 329 DFVFVTHYP------------SKKRPFYAM--------DDPADPTFTLSFDLLYHGLEIT 368

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H   ++L+     G++ E +E         F+ GMPPHGG+  G++R+ M L+G
Sbjct: 369 TGGQRIHDYNMLLEKIEKRGMTTEGMEQ----YMDTFKHGMPPHGGLGIGLERLTMKLIG 424

Query: 553 AKNVREVSLFPMSQNFCDL 571
             NVRE +LFP   +  + 
Sbjct: 425 EDNVRETTLFPRDMSRLEP 443


>gi|261749371|ref|YP_003257056.1| lysyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
 gi|261497463|gb|ACX83913.1| lysyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
          Length = 518

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/290 (21%), Positives = 119/290 (41%), Gaps = 25/290 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC----ID 74
             +R++G + R+R  G   F +I+DH G  Q+    +    E      S  +L       
Sbjct: 64  ESIRIAGRLIRLRILGKASFGEIKDHTGRIQIYFKKNHFDSEKIGKEESYNILLKKLIDI 123

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-------YPESIRFK 127
           G ++          +   +I +  QK+ +LS +      V  ++             R++
Sbjct: 124 GDIIGVQGFLFKTKM--NEITVHVQKLTLLSKSLRPLPQVKVDKNKKIYDAFSNPEQRYR 181

Query: 128 YRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            R++DL  +   K I  KRT II  +R  +  + ++E  TPIL +          V    
Sbjct: 182 MRYVDLIVNDHVKEIFLKRTHIIRKIRNFLDDKGYLEVDTPILQSIPGGAVARPFVTYHN 241

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           + G    L  A + Y + L+  GF   ++ +  FR+E       P EF  L++ +++ + 
Sbjct: 242 SLGIPLYLRIANELYLKRLIIGGFHGVYEFSKNFRNEGMDRLHNP-EFTVLELYVAYKDY 300

Query: 247 DDILNTMENVLRGVFEEF----------SNGNTVSNNFLRICYDDAIRRY 286
             ++N  E +L+ +F +           ++  +    F RI   DAI+ +
Sbjct: 301 YWMMNFTEKLLKCIFHQMQKNFKDILIENDSISFQTPFPRIPILDAIQTH 350



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 2/120 (1%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           EK           P       K +      + +++L+ NG EIA+     +     L   
Sbjct: 393 EKHYKNPTFIIDYPIEMSPLTKRHRYKKNLSERFELIVNGQEIANAYSELNDPIDQLDRL 452

Query: 509 SNVGISKEVVENRF--GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                  E  E+ F      RA + GMPP  GI  GIDR+VML     +++EV LFP  +
Sbjct: 453 REQIKFSEKKESMFLDKDFIRALEFGMPPTAGIGIGIDRLVMLFTKQNSIQEVLLFPQMR 512


>gi|330797506|ref|XP_003286801.1| hypothetical protein DICPUDRAFT_150804 [Dictyostelium purpureum]
 gi|325083244|gb|EGC36702.1| hypothetical protein DICPUDRAFT_150804 [Dictyostelium purpureum]
          Length = 464

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 73/348 (20%), Positives = 124/348 (35%), Gaps = 51/348 (14%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           D     ++ GWV  +R    + F+++ D   +  +    D   F   K           G
Sbjct: 29  DSNKIHKVKGWVRNIRIQKNVSFIEVNDGSSVQGLQIVGDKDTFSNIKH----------G 78

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +      +       Q+E+  + I+++        P+  +    E +R +   L  R 
Sbjct: 79  SAVEAEGNLMKGEGKNPQVEMQLKNIKLIGDC-PNEFPLQPKHHTFEFLR-EIAHLRSRG 136

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           +T       R      +        FI   TPI+TAS  EG  +                
Sbjct: 137 NTAGALFRMRNESTQLIHQYFNKNGFINVHTPIITASDCEGGGEQFQVVSTLDNKSNKQP 196

Query: 190 SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+   A      Q +  + AS   R +   P FR E   + R   EF+ ++ E++F++ 
Sbjct: 197 HFFGEPAYLTVSGQLEAEIFASSHSRVYTFGPTFRAEKSNTPRHLSEFWMIEPEIAFIDL 256

Query: 247 DDILNTMENVLRGVFE----------EFSN-----------GNTVSNNFLRICYDDAIRR 285
           +D L+  E+ L+ V            EF N             TV N F+R+ Y DAI  
Sbjct: 257 NDNLDIAEDFLKYVINNLLINCKDDIEFFNKRIDTGLIERLKKTVDNKFIRLEYKDAINL 316

Query: 286 YGTDKPDLRNPIIMHN---------VTEHFVHSEFRVFSKILSVNPGY 324
               K   +N I M +         +T+HF +    + +   S+ P Y
Sbjct: 317 LKESKEITQNSIEMGDDLQREHEKYITQHFGNVPVFIINWPKSIKPFY 364



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 23/134 (17%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             +I+++P             +  PF M Q        +++         LV    E+  
Sbjct: 350 PVFIINWP------------KSIKPFYMRQDDSNPNVVSNMDL-------LVPEVGELIG 390

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G IR    +++L+   ++G+ ++  E          + G  PHGG   G +R +  + G 
Sbjct: 391 GSIREERYDILLKNIQDLGMDQKTYE----WYLDLRKYGSVPHGGFGLGFERFLQYVTGL 446

Query: 554 KNVREVSLFPMSQN 567
           +N+R+V   P  QN
Sbjct: 447 QNIRDVIPIPRYQN 460


>gi|171185237|ref|YP_001794156.1| lysyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170934449|gb|ACB39710.1| lysyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 482

 Score =  162 bits (411), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 85/314 (27%), Positives = 133/314 (42%), Gaps = 41/314 (13%)

Query: 2   HRYR-THSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           H +R THS   L            VG  VR +G V  VR H  ++F+D+ +     QV+A
Sbjct: 30  HSFRITHSVKALNELRRQALLEPWVGLVVRTAGRVTDVRRHPNVVFIDLYEDGARFQVMA 89

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +P     E    V     L ++G ++             G   + A  + +L+ A + PL
Sbjct: 90  DPKLPGVE---GVWRGDFLGVEGAIVKTQR---------GDYAVKASSLILLAKAVQ-PL 136

Query: 113 PVFGEREYPESIRFKYR----FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
           P +G+ +       +YR     LDL    L   I  R R I ++R  M    FIE  TP+
Sbjct: 137 PEWGKVDRDSPFYMRYRSVAMVLDL---QLRWRIAARARFIQALREAMWKRGFIEIPTPV 193

Query: 169 LTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L        AR F          +Y L  +P+ Y +  + +GF + F++ P FR+ED  +
Sbjct: 194 LQPIYGGAAARPFTTKIWAIDEEWY-LRISPELYLKRYIIAGFPKVFEVGPQFRNEDIDA 252

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVL---------RGVFEEFSNGNTVSNNFLRIC 278
              P EF+ L+   ++ + +D++   E V+          GV +        S  + RI 
Sbjct: 253 LHNP-EFWSLEAYQAYADYNDMMRLTEEVVYEAVSAVLGTGVVKYRDQTINFSPPWRRIT 311

Query: 279 YDDAIRRYGTDKPD 292
             DA+R YG   PD
Sbjct: 312 LHDALREYGGVDPD 325



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 51/145 (35%), Gaps = 23/145 (15%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           ++     E  +++D+P     EE   +   H                        +++  
Sbjct: 359 LVEKKLVEPTFVLDYP-----EESTPLCKPHR----------------EKRGLVERFEAF 397

Query: 486 CNGFEIASGGIRNHMSEVMLQ--AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
             G E+A+     +      +          KE               GMPP GG+  G+
Sbjct: 398 VGGHEVANAYTELNDPVRQYEYFVREEELFPKEEAHPLDWDFVEELSFGMPPTGGVGIGV 457

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNF 568
           DR+ M++  A+++++V  +P+ +  
Sbjct: 458 DRLAMVITNAESIKDVIPYPIVKRA 482


>gi|315654229|ref|ZP_07907137.1| lysine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315491264|gb|EFU80881.1| lysine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 521

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/275 (19%), Positives = 111/275 (40%), Gaps = 19/275 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFE 60
            +Y     G+     VG    L+G V  +R  G + F  +++  G   Q++ +      E
Sbjct: 64  EKYSDLQAGEETAEFVG----LAGRVRLMRSSGKLAFATLQEGNGSTIQIMISEREVGPE 119

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF----- 115
              + ++E  L   G  +      I++    G++ +     ++   A       +     
Sbjct: 120 SMSAYKAEVDL---GDHLFVHGRVISSK--RGELSIFVDSWQLTCKALRPLPKSYINEAG 174

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
            E    E +R + R LD+      +++V+ R+R++ ++R  +   ++IE  TP+L     
Sbjct: 175 EEVSLSEDMRVRRRDLDMIMRPAARDMVRNRSRVVQTLRRYLDEHDYIEVETPMLQTLHG 234

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  AP+ + +  +  G D+ F+I   FR+E   S   P E
Sbjct: 235 GAAARPFVTHMNAYDTELY-LRIAPELFLKRCLIGGIDKVFEINRNFRNEGADSSHSP-E 292

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           F  L++  ++ +   I    + +++    +     
Sbjct: 293 FTMLEVYCAYGDYHQIARLTQEMIQRCARDVFGTE 327



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 56/147 (38%), Gaps = 26/147 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            ++    +E  ++ DFP     E+   +   H                     +  ++DL
Sbjct: 396 ELVGDKLWEPTFVCDFP-----EDTSPLVKTH----------------PDKPGQVQKWDL 434

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIA 540
           +  GFE+A+G    +   V    F    +                  + + GMPP GG+ 
Sbjct: 435 IIRGFEVATGYSELNDPVVQRARFEQQALDAANGDPEAMEVDEDFLISMEQGMPPAGGMG 494

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            G+DR++M L GA  +RE   FP+ + 
Sbjct: 495 MGLDRLLMTLTGAG-IRETITFPLVKR 520


>gi|330939275|ref|XP_003305825.1| hypothetical protein PTT_18775 [Pyrenophora teres f. teres 0-1]
 gi|311316967|gb|EFQ86058.1| hypothetical protein PTT_18775 [Pyrenophora teres f. teres 0-1]
          Length = 601

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/294 (18%), Positives = 117/294 (39%), Gaps = 19/294 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI------TQVVANPDSACFEIAKSVR 66
           G ++    +R+   V   R     +   +    G+          +  D    +  ++++
Sbjct: 116 GETEPEKEIRIGLRVITQRSASNALHFYVCKAEGVSIQVMCQLQESKADVPFEKQHENIQ 175

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ + G        T       G++ + A+++ +L+    + LP        +  R 
Sbjct: 176 RGDIIGVIGF----PGRTAPKKGGEGELSIFAREVILLTPCLRM-LPTEHFGYKDQEQRH 230

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + RFLDL  +   +N  + RT+I+ ++R  +   +F+E  TP++   +    AR F    
Sbjct: 231 RNRFLDLIMNDSTRNTFITRTKIVKAIRKYLDDRDFLEVQTPMMNKIAGGATARPFKTYH 290

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  AP+ Y + L+  G +R ++I   FR+E       P EF   +  M++ 
Sbjct: 291 NELDMELY-MRIAPELYLKELVVGGLERVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYA 348

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           + +D+LN  E ++  + +E +       +         +      +P  R  +I
Sbjct: 349 DYNDVLNMTEELVSELVKEVTGSYETVYH----TQSGEVYNVNWARPWRRVEMI 398



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 4/92 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++      EI +     +        F      K   ++          ++ + 
Sbjct: 481 PGLCERFEAFVCKKEICNAYTELNDPFDQRLRFEEQANQKAAGDDEAQLIDETFCQSLEY 540

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP GG   GIDR+VM L     ++EV  FP
Sbjct: 541 GLPPTGGWGMGIDRLVMFLTDHYTIKEVLTFP 572


>gi|189210902|ref|XP_001941782.1| lysyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187977875|gb|EDU44501.1| lysyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 601

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/294 (18%), Positives = 117/294 (39%), Gaps = 19/294 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI------TQVVANPDSACFEIAKSVR 66
           G ++    +R+   V   R     +   +    G+          +  D    +  ++++
Sbjct: 116 GETEPEKEIRIGLRVITQRSASNALHFYVCKAEGVSIQVMCQLQESKADVPFEKQHENIQ 175

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ + G        T       G++ + A+++ +L+    + LP        +  R 
Sbjct: 176 RGDIIGVIGF----PGRTAPKKGGEGELSIFAREVILLTPCLRM-LPTEHFGYKDQEQRH 230

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + RFLDL  +   +N  + RT+I+ ++R  +   +F+E  TP++   +    AR F    
Sbjct: 231 RNRFLDLIMNDSTRNTFITRTKIVKAIRKYLDDRDFLEVQTPMMNKIAGGATARPFKTYH 290

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  Y +  AP+ Y + L+  G +R ++I   FR+E       P EF   +  M++ 
Sbjct: 291 NELDMELY-MRIAPELYLKELVVGGLERVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYA 348

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           + +D+LN  E ++  + +E +       +         +      +P  R  +I
Sbjct: 349 DYNDVLNMTEELVSELVKEVTGSYETVYH----TQSGEVYNVNWARPWRRVEMI 398



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 4/92 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++      EI +     +        F      K   ++          ++ + 
Sbjct: 481 PGLCERFEAFVCKKEICNAYTELNDPFDQRLRFEEQANQKAAGDDEAQLIDETFCQSLEY 540

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP GG   GIDR+VM L     ++EV  FP
Sbjct: 541 GLPPTGGWGMGIDRLVMFLTDHYTIKEVLTFP 572


>gi|291059980|gb|ADD72715.1| asparaginyl-tRNA synthetase [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 595

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 92/303 (30%), Gaps = 46/303 (15%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-----------DSACFEI----- 61
           G    + GWV   R     +F+ + D      +                +   +I     
Sbjct: 90  GQHECVHGWVRSKRETKRAVFISLSDGSCPDTLQVTVPLPECSASLSSGAQAEQIPNVRD 149

Query: 62  ----AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
                +++         G  +      + +      +EL A  + +L  A     P+  +
Sbjct: 150 AVLQGETLAQTLKRVTTGACIRAEGALVPSPGAGQALELRACNLTVLGEAPAETYPLQKK 209

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R  +  L  R  T       R+ +  ++       +F    TPI+TAS  EGA
Sbjct: 210 SHSFEFLRA-HAHLRARTSTFAACARVRSALAGAVHRFFSERHFQYVHTPIITASDCEGA 268

Query: 178 RDFLVPSRVNQ----------------------GSFY---ALPQAPQQYKQLLMASGFDR 212
            +    +  +                         F+   A      Q +    A    R
Sbjct: 269 GELFRVTTFDPVRIAREAHAAGAAGNPYALTYADDFFGKAARLTVSGQLQGEAYALALTR 328

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN 272
            +   P FR E+  + R   EF+ ++ E++F    D ++  E  L  +            
Sbjct: 329 IYTFGPTFRAENSNTSRHLSEFWMVEPEIAFARITDCMDVAEEFLAYLLRAALKDCAQDI 388

Query: 273 NFL 275
            FL
Sbjct: 389 AFL 391



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 50/150 (33%), Gaps = 26/150 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +          + D+P     +E K        F M           D  ++++  
Sbjct: 470 HECFLTEEVFHGPVIVYDYP-----KEIK-------AFYMK-------LNADGTTVRSM- 509

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  EI  G  R    EV+       G         +       + G  PH G  
Sbjct: 510 -DLLVPGLGEIMGGSEREEQFEVLCARIRASGFDPHD----YRWYTDLRRFGTAPHAGFG 564

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R++  + G  N+R+V  FP +    D
Sbjct: 565 LGFERLLQYVTGLGNIRDVIPFPRTPRTAD 594


>gi|240047435|ref|YP_002960823.1| Lysyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985007|emb|CAT05000.1| Lysyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 490

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 71/353 (20%), Positives = 140/353 (39%), Gaps = 36/353 (10%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           ++  H+  DL   ++      +G +   R      FL I+++    Q+  +   +  E  
Sbjct: 41  KFANHTKEDL--ENLNIRAAFAGRIIAQRGP----FLVIQNNGLHIQLYIDKRFSQSEKY 94

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +     L   G ++   AE       T Q+ L      +L+ + + PLP        +
Sbjct: 95  HLIFENLDL---GDIIE--AEGYLFKTKTQQLSLHVSDFLLLTKSLK-PLPDQYYGLSDQ 148

Query: 123 SIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDF 180
             +++ R+LDL  +T  ++  +KR+RI++ +R     +N++E  TP+L        AR F
Sbjct: 149 EEKYRKRYLDLIVNTKTRDTFIKRSRIVSYIRHFFDNQNYLEVDTPVLQPILGGASARPF 208

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +         +Y L  A +   + L+  G DR ++I   FR+E   +   P EF  ++  
Sbjct: 209 ITHYNSLHRDYY-LRIATELPLKKLLVGGIDRVYEIGKIFRNEGVDTTHNP-EFTSIEFY 266

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            ++   + ++   EN+ + + E+ +N N              +  +G  + D   P    
Sbjct: 267 QAYANLETMMQQTENLFQFLIEKINNSN-------------PVLNFGEYQIDFSKPFARI 313

Query: 301 NVTEHFVHSEFRVF-------SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           N+ E         F       +K ++ +   +V     KG   N  F   + E
Sbjct: 314 NMVEEVSKKVGHNFYQISEEQAKQIAQDHDIKVEPFYTKGHIINELFEKYIEE 366



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 48/133 (36%), Gaps = 9/133 (6%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHM 500
            +E   EE+ I       T     +  L   D  +     + +L     E A+     + 
Sbjct: 359 LFEKYIEEELIQPTF--VTGHPIEISPLAKKDPKNNNFTQRAELFIAKKEFANMFNELND 416

Query: 501 SEVMLQAFS----NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
               L  F        +  E           +   G+PP GG   GIDR+VML    +++
Sbjct: 417 PFDQLARFESQISEKNMGNEEASEIDYDFVESLYYGLPPAGGCGIGIDRLVMLFTNNESI 476

Query: 557 REVSLFP--MSQN 567
           REV L+P   ++ 
Sbjct: 477 REVILYPQLKTKK 489


>gi|296392770|ref|YP_003657654.1| lysyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296179917|gb|ADG96823.1| lysyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 1091

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 68/283 (24%), Positives = 113/283 (39%), Gaps = 12/283 (4%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  VR+SG V R R HGG++F+D+ D  G  QVV            + R E  L     V
Sbjct: 661 GRQVRVSGRVLRERDHGGVVFVDLSDSSGAAQVVLEERELPDGKLNAFRKEIDLGDLISV 720

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +    +      TG   L A+    L+     PLP           + + R ++L  + 
Sbjct: 721 EAAPGVSR-----TGTASLMARDWR-LNAKCLRPLPDKRRGLTDPEAKVRLRHVELMTNP 774

Query: 138 LHKNIV-KRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALP 195
             ++ + KR  ++ ++R ++  E F+E  TP+L        A  F           Y L 
Sbjct: 775 QARDALAKRGAVLRTLREQLWGEGFLEVETPVLQRVHGGANAEPFRTHINAYDLPLY-LR 833

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G +R F+I   FR+E   +   P EF  L+   +  +   + +  E 
Sbjct: 834 IAPELYLKRLLVGGMERVFEIGRVFRNEGVDATHNP-EFTLLEAYQAHSDYRGMRDLTEQ 892

Query: 256 VLRGVFEEF--SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +LR   +    +        +  I    A+ +   D+ D   P
Sbjct: 893 MLRASAQAVGHAGLLAAPGPWPMIPMLTAVSQALGDEVDEHTP 935



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 49/157 (31%), Gaps = 28/157 (17%)

Query: 411  SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
              +      + + L  +        +  DFP             + +P T          
Sbjct: 954  WDSGQLLLELYERL--VEHTTTTPTFYSDFPL------------SVSPLTKQHPD----- 994

Query: 471  GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLY 526
                      ++DLV  G E+A+     +      +       +                
Sbjct: 995  ----RPGVTQRWDLVVGGMELATAYSELNDPVEQRRRLQAQSEAAASGDPEAMELDEDFL 1050

Query: 527  RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A +  MPP GG+  G+DR+VMLL G   +RE   FP
Sbjct: 1051 AALEHAMPPSGGLGVGVDRVVMLLTGR-TIRETLAFP 1086


>gi|284989232|ref|YP_003407786.1| lysyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284062477|gb|ADB73415.1| lysyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 528

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 53/274 (19%), Positives = 106/274 (38%), Gaps = 19/274 (6%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RT +  ++             G    ++G V  VR  G + F  +R+     QV+ + D 
Sbjct: 68  RTTTLAEVRAEHPDLEPDTMTGERAGVTGRVIFVRNTGKLCFATLREGDAELQVMLSLDR 127

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E   + +++  L   G  +    E   +    G++ + A   ++ + A         
Sbjct: 128 VGEESLAAWKADVDL---GDHVFVEGEVGTSR--RGELSVFADSWQLTAKALRPLP--VA 180

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSP 174
            +   E +R + R++DL  RD   + + +R  ++ ++R  +    ++E  TP+L T    
Sbjct: 181 HKPMSEELRVRRRYVDLIVRDEARRTVRQRATVMATLRRELATRGYLEVETPMLQTVHGG 240

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F           Y L  AP+ + +  +  G +R F+I   FR+E   S   P EF
Sbjct: 241 AAARPFRTHMNAFDLDLY-LRIAPELFLKRCIVGGLERVFEINRNFRNEGVDSTHSP-EF 298

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
             L+   ++ +   +      + +         +
Sbjct: 299 AMLEAYQAYADYQAMATLTRELTQECCGALFGDH 332



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 26/142 (18%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           ++  +  E  +++D+P      +   +  AH                      A ++DL 
Sbjct: 402 LVQDSLQEPTFVVDYPL-----DTSPLTRAHR----------------SQPGLAEKWDLY 440

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAA 541
             G E A+            +      +     +            A + GMPP GG+  
Sbjct: 441 IAGVERATAYSELVDPVAQRERLVAQAVLAAEGDPEAMAFDEDFLEALEYGMPPTGGMGM 500

Query: 542 GIDRIVMLLLGAKNVREVSLFP 563
           G+DR++M L G   +RE  LFP
Sbjct: 501 GMDRLMMTLTGLG-IRETILFP 521


>gi|308373201|ref|ZP_07431378.2| LOW QUALITY PROTEIN: lysyl-tRNA synthetase 2 lysX [Mycobacterium
           tuberculosis SUMu005]
 gi|308374363|ref|ZP_07435759.2| LOW QUALITY PROTEIN: lysyl-tRNA synthetase 2 lysX [Mycobacterium
           tuberculosis SUMu006]
 gi|308338531|gb|EFP27382.1| LOW QUALITY PROTEIN: lysyl-tRNA synthetase 2 lysX [Mycobacterium
           tuberculosis SUMu005]
 gi|308342201|gb|EFP31052.1| LOW QUALITY PROTEIN: lysyl-tRNA synthetase 2 lysX [Mycobacterium
           tuberculosis SUMu006]
          Length = 1102

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+ +        A   
Sbjct: 641 SHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAADF 700

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  +     +   TG   L      ++      PLP   +       R
Sbjct: 701 NAATDL---GDLVEMTGHMGASK--TGTPSLIVSGWRLIGKCLR-PLPNKWKGLLDPEAR 754

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR F+  
Sbjct: 755 VRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTH 814

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 815 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 872

Query: 244 VEQDDILNTMENVL 257
            +  + ++    ++
Sbjct: 873 ADYLEWIDGCRELI 886



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 32/192 (16%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNCFEFC 435
            +   +EA+  R+D   G +      D    P +    A      + + L  + C   +  
Sbjct: 930  HDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLELYEHL--VECRTEQPT 987

Query: 436  WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            + +DFP             + +P T P                A ++DLV  G E+ +  
Sbjct: 988  FYIDFP------------TSVSPLTRPHRS---------KRGVAERWDLVAWGIELGTAY 1026

Query: 496  IRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                      +      +                 +A +  MPP GG+  GIDR+VML+ 
Sbjct: 1027 SELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLIT 1086

Query: 552  GAKNVREVSLFP 563
            G  ++RE   FP
Sbjct: 1087 GR-SIRETLPFP 1097


>gi|296439734|sp|A0PP57|LYSX_MYCUA RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
          Length = 1105

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      +D  + V +SG + RVR +GG++F  +RD  G  QV+ +        A   
Sbjct: 651 THTVAQAMDADDQASVSVSGRILRVRNYGGVLFAHLRDWSGEIQVLLDNSRLGQGRAADF 710

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  + +  ++   TG   L  ++  ++      PLP           R
Sbjct: 711 NAAIDL---GDLVEMTGQMGSSK--TGTRSLIVRRWRLIGKCLR-PLPNKWNGLTDPEAR 764

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R++DL  +   + ++  R+ ++ S+R  + A+ FIE  TPIL        AR F+  
Sbjct: 765 VRTRYVDLAVNAESRTLITARSAVLRSVRETLSAKGFIEVETPILQQVHGGATARPFITH 824

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 825 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 882

Query: 244 VEQDDILNTMENVL 257
            +    +++   ++
Sbjct: 883 ADYRVWIDSCRELI 896



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 67/196 (34%), Gaps = 32/196 (16%)

Query: 376  AKHLNIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNC 431
             K ++   +EA+  ++D     +      D    P +    A      + + L  +    
Sbjct: 929  VKTVHDAVSEALGEQIDADTDLATLRRLADAARIPYRAQWDAGAVVLELYEHL--VESRT 986

Query: 432  FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +  + +DFP             + +P T P      +         A ++DLV  G E+
Sbjct: 987  EQPTFYLDFP------------TSVSPLTRPHRSKPGI---------AERWDLVAWGVEL 1025

Query: 492  ASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             +                   +                 +A +  MPP GG+  G+DR+V
Sbjct: 1026 GTAYSELTDPVEQRLRLEEQSLLAAGGDPEAMQLDEDFLQAMEYAMPPTGGLGMGVDRVV 1085

Query: 548  MLLLGAKNVREVSLFP 563
            ML+ G  ++RE   FP
Sbjct: 1086 MLITGR-SIRETLPFP 1100


>gi|289757744|ref|ZP_06517122.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289713308|gb|EFD77320.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|326903255|gb|EGE50188.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis W-148]
          Length = 1172

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+ +        A   
Sbjct: 711 SHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAADF 770

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  +     +   TG   L      ++      PLP   +       R
Sbjct: 771 NAATDL---GDLVEMTGHMGASK--TGTPSLIVSGWRLIGKCLR-PLPNKWKGLLDPEAR 824

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR F+  
Sbjct: 825 VRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTH 884

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 885 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 942

Query: 244 VEQDDILNTMENVL 257
            +  + ++    ++
Sbjct: 943 ADYLEWIDGCRELI 956



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 32/192 (16%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNCFEFC 435
            +   +EA+  R+D   G +      D    P +    A      + + L  + C   +  
Sbjct: 1000 HDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLELYEHL--VECRTEQPT 1057

Query: 436  WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            + +DFP             + +P T P                A ++DLV  G E+ +  
Sbjct: 1058 FYIDFP------------TSVSPLTRPHRS---------KRGVAERWDLVAWGIELGTAY 1096

Query: 496  IRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                      +      +                 +A +  MPP GG+  GIDR+VML+ 
Sbjct: 1097 SELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLIT 1156

Query: 552  GAKNVREVSLFP 563
            G  ++RE   FP
Sbjct: 1157 GR-SIRETLPFP 1167


>gi|215445821|ref|ZP_03432573.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|294996590|ref|ZP_06802281.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 210]
          Length = 1111

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+ +        A   
Sbjct: 650 SHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAADF 709

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  +     +   TG   L      ++      PLP   +       R
Sbjct: 710 NAATDL---GDLVEMTGHMGASK--TGTPSLIVSGWRLIGKCLR-PLPNKWKGLLDPEAR 763

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR F+  
Sbjct: 764 VRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTH 823

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 824 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 881

Query: 244 VEQDDILNTMENVL 257
            +  + ++    ++
Sbjct: 882 ADYLEWIDGCRELI 895



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 32/192 (16%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNCFEFC 435
            +   +EA+  R+D   G +      D    P +    A      + + L  + C   +  
Sbjct: 939  HDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLELYEHL--VECRTEQPT 996

Query: 436  WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            + +DFP             + +P T P                A ++DLV  G E+ +  
Sbjct: 997  FYIDFP------------TSVSPLTRPHRS---------KRGVAERWDLVAWGIELGTAY 1035

Query: 496  IRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                      +      +                 +A +  MPP GG+  GIDR+VML+ 
Sbjct: 1036 SELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLIT 1095

Query: 552  GAKNVREVSLFP 563
            G  ++RE   FP
Sbjct: 1096 GR-SIRETLPFP 1106


>gi|215404058|ref|ZP_03416239.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215411286|ref|ZP_03420094.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|218753346|ref|ZP_03532142.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|254550646|ref|ZP_05141093.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|297634193|ref|ZP_06951973.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|313658512|ref|ZP_07815392.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
          Length = 1111

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+ +        A   
Sbjct: 650 SHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAADF 709

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  +     +   TG   L      ++      PLP   +       R
Sbjct: 710 NAATDL---GDLVEMTGHMGASK--TGTPSLIVSGWRLIGKCLR-PLPNKWKGLLDPEAR 763

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR F+  
Sbjct: 764 VRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTH 823

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 824 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 881

Query: 244 VEQDDILNTMENVL 257
            +  + ++    ++
Sbjct: 882 ADYLEWIDGCRELI 895



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 32/192 (16%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNCFEFC 435
            +   +EA+  R+D   G +      D    P +    A      + + L  + C   +  
Sbjct: 939  HDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLELYEHL--VECRTEQPT 996

Query: 436  WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            + +DFP             + +P T P                A ++DLV  G E+ +  
Sbjct: 997  FYIDFP------------TSVSPLTRPHRS---------KRGVAERWDLVAWGIELGTAY 1035

Query: 496  IRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                      +      +                 +A +  MPP GG+  GIDR+VML+ 
Sbjct: 1036 SELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLIT 1095

Query: 552  GAKNVREVSLFP 563
            G  ++RE   FP
Sbjct: 1096 GR-SIRETLPFP 1106


>gi|253799320|ref|YP_003032321.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis KZN 1435]
 gi|254364489|ref|ZP_04980535.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis str.
           Haarlem]
 gi|289554585|ref|ZP_06443795.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis KZN 605]
 gi|289745922|ref|ZP_06505300.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|308231895|ref|ZP_07414164.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu001]
 gi|308370781|ref|ZP_07422693.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu003]
 gi|308372017|ref|ZP_07427062.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu004]
 gi|308376778|ref|ZP_07440004.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu008]
 gi|308377785|ref|ZP_07480396.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu009]
 gi|308378997|ref|ZP_07484594.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu010]
 gi|308380136|ref|ZP_07488819.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu011]
 gi|296439671|sp|C6DS31|LYSX_MYCTK RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|134150003|gb|EBA42048.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis str.
           Haarlem]
 gi|253320823|gb|ACT25426.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis KZN 1435]
 gi|289439217|gb|EFD21710.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis KZN 605]
 gi|289686450|gb|EFD53938.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|308215742|gb|EFO75141.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu001]
 gi|308330919|gb|EFP19770.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu003]
 gi|308334689|gb|EFP23540.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu004]
 gi|308350027|gb|EFP38878.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu008]
 gi|308354664|gb|EFP43515.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu009]
 gi|308358620|gb|EFP47471.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu010]
 gi|308362546|gb|EFP51397.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu011]
 gi|328459071|gb|AEB04494.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis KZN 4207]
          Length = 1174

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+ +        A   
Sbjct: 713 SHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAADF 772

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  +     +   TG   L      ++      PLP   +       R
Sbjct: 773 NAATDL---GDLVEMTGHMGASK--TGTPSLIVSGWRLIGKCLR-PLPNKWKGLLDPEAR 826

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR F+  
Sbjct: 827 VRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTH 886

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 887 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 944

Query: 244 VEQDDILNTMENVL 257
            +  + ++    ++
Sbjct: 945 ADYLEWIDGCRELI 958



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 32/192 (16%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNCFEFC 435
            +   +EA+  R+D   G +      D    P +    A      + + L  + C   +  
Sbjct: 1002 HDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLELYEHL--VECRTEQPT 1059

Query: 436  WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            + +DFP             + +P T P                A ++DLV  G E+ +  
Sbjct: 1060 FYIDFP------------TSVSPLTRPHRS---------KRGVAERWDLVAWGIELGTAY 1098

Query: 496  IRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                      +      +                 +A +  MPP GG+  GIDR+VML+ 
Sbjct: 1099 SELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLIT 1158

Query: 552  GAKNVREVSLFP 563
            G  ++RE   FP
Sbjct: 1159 GR-SIRETLPFP 1169


>gi|118617265|ref|YP_905597.1| lysyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118569375|gb|ABL04126.1| lysyl-tRNA synthetase 2 LysX [Mycobacterium ulcerans Agy99]
          Length = 1097

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      +D  + V +SG + RVR +GG++F  +RD  G  QV+ +        A   
Sbjct: 643 THTVAQAMDADDQASVSVSGRILRVRNYGGVLFAHLRDWSGEIQVLLDNSRLGQGRAADF 702

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  + +  ++   TG   L  ++  ++      PLP           R
Sbjct: 703 NAAIDL---GDLVEMTGQMGSSK--TGTRSLIVRRWRLIGKCLR-PLPNKWNGLTDPEAR 756

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R++DL  +   + ++  R+ ++ S+R  + A+ FIE  TPIL        AR F+  
Sbjct: 757 VRTRYVDLAVNAESRTLITARSAVLRSVRETLSAKGFIEVETPILQQVHGGATARPFITH 816

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 817 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 874

Query: 244 VEQDDILNTMENVL 257
            +    +++   ++
Sbjct: 875 ADYRVWIDSCRELI 888



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 67/196 (34%), Gaps = 32/196 (16%)

Query: 376  AKHLNIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNC 431
             K ++   +EA+  ++D     +      D    P +    A      + + L  +    
Sbjct: 921  VKTVHDAVSEALGEQIDADTDLATLRRLADAARIPYRAQWDAGAVVLELYEHL--VESRT 978

Query: 432  FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +  + +DFP             + +P T P      +         A ++DLV  G E+
Sbjct: 979  EQPTFYLDFP------------TSVSPLTRPHRSKPGI---------AERWDLVAWGVEL 1017

Query: 492  ASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             +                   +                 +A +  MPP GG+  G+DR+V
Sbjct: 1018 GTAYSELTDPVEQRLRLEEQSLLAAGGDPEAMQLDEDFLQAMEYAMPPTGGLGMGVDRVV 1077

Query: 548  MLLLGAKNVREVSLFP 563
            ML+ G  ++RE   FP
Sbjct: 1078 MLITGR-SIRETLPFP 1092


>gi|323719901|gb|EGB29014.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis CDC1551A]
          Length = 1083

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+ +        A   
Sbjct: 622 SHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAADF 681

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  +     +   TG   L      ++      PLP   +       R
Sbjct: 682 NAATDL---GDLVEMTGHMGASK--TGTPSLIVSGWRLIGKCLR-PLPNKWKGLLDPEAR 735

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR F+  
Sbjct: 736 VRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTH 795

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 796 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 853

Query: 244 VEQDDILNTMENVL 257
            +  + ++    ++
Sbjct: 854 ADYLEWIDGCRELI 867



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 32/192 (16%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNCFEFC 435
            +   +EA+  R+D   G +      D    P +    A      + + L  + C   +  
Sbjct: 911  HDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLELYEHL--VECRTEQPT 968

Query: 436  WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            + +DFP             + +P T P                A ++DLV  G E+ +  
Sbjct: 969  FYIDFP------------TSVSPLTRPHRS---------KRGVAERWDLVAWGIELGTAY 1007

Query: 496  IRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                      +      +                 +A +  MPP GG+  GIDR+VML+ 
Sbjct: 1008 SELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLIT 1067

Query: 552  GAKNVREVSLFP 563
            G  ++RE   FP
Sbjct: 1068 GR-SIRETLPFP 1078


>gi|15841096|ref|NP_336133.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|308401001|ref|ZP_07493334.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu012]
 gi|13881311|gb|AAK45947.1| lysyl-tRNA synthetase, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|308366166|gb|EFP55017.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu012]
          Length = 1185

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+ +        A   
Sbjct: 724 SHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAADF 783

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  +     +   TG   L      ++      PLP   +       R
Sbjct: 784 NAATDL---GDLVEMTGHMGASK--TGTPSLIVSGWRLIGKCLR-PLPNKWKGLLDPEAR 837

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR F+  
Sbjct: 838 VRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTH 897

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 898 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 955

Query: 244 VEQDDILNTMENVL 257
            +  + ++    ++
Sbjct: 956 ADYLEWIDGCRELI 969



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 32/192 (16%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNCFEFC 435
            +   +EA+  R+D   G +      D    P +    A      + + L  + C   +  
Sbjct: 1013 HDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLELYEHL--VECRTEQPT 1070

Query: 436  WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            + +DFP             + +P T P                A ++DLV  G E+ +  
Sbjct: 1071 FYIDFP------------TSVSPLTRPHRS---------KRGVAERWDLVAWGIELGTAY 1109

Query: 496  IRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                      +      +                 +A +  MPP GG+  GIDR+VML+ 
Sbjct: 1110 SELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLIT 1169

Query: 552  GAKNVREVSLFP 563
            G  ++RE   FP
Sbjct: 1170 GR-SIRETLPFP 1180


>gi|15608778|ref|NP_216156.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|148661436|ref|YP_001282959.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148822848|ref|YP_001287602.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|254231841|ref|ZP_04925168.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis C]
 gi|260204909|ref|ZP_05772400.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289574309|ref|ZP_06454536.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis K85]
 gi|289761791|ref|ZP_06521169.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis GM 1503]
 gi|297731180|ref|ZP_06960298.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298525138|ref|ZP_07012547.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis 94_M4241A]
 gi|308375634|ref|ZP_07444586.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu007]
 gi|11387190|sp|P94974|LYSX_MYCTU RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|296439669|sp|A5U2Z7|LYSX_MYCTA RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|296439670|sp|A5WMW1|LYSX_MYCTF RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|1838991|emb|CAB06635.1| Possible lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis
           H37Rv]
 gi|124600900|gb|EAY59910.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis C]
 gi|148505588|gb|ABQ73397.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148721375|gb|ABR06000.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis F11]
 gi|289538740|gb|EFD43318.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis K85]
 gi|289709297|gb|EFD73313.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis GM 1503]
 gi|298494932|gb|EFI30226.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis 94_M4241A]
 gi|308345727|gb|EFP34578.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu007]
          Length = 1172

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+ +        A   
Sbjct: 711 SHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAADF 770

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  +     +   TG   L      ++      PLP   +       R
Sbjct: 771 NAATDL---GDLVEMTGHMGASK--TGTPSLIVSGWRLIGKCLR-PLPNKWKGLLDPEAR 824

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR F+  
Sbjct: 825 VRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTH 884

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 885 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 942

Query: 244 VEQDDILNTMENVL 257
            +  + ++    ++
Sbjct: 943 ADYLEWIDGCRELI 956



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 32/192 (16%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNCFEFC 435
            +   +EA+  R+D   G +      D    P +    A      + + L  + C   +  
Sbjct: 1000 HDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLELYEHL--VECRTEQPT 1057

Query: 436  WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            + +DFP             + +P T P                A ++DLV  G E+ +  
Sbjct: 1058 FYIDFP------------TSVSPLTRPHRS---------KRGVAERWDLVAWGIELGTAY 1096

Query: 496  IRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                      +      +                 +A +  MPP GG+  GIDR+VML+ 
Sbjct: 1097 SELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLIT 1156

Query: 552  GAKNVREVSLFP 563
            G  ++RE   FP
Sbjct: 1157 GR-SIRETLPFP 1167


>gi|309810941|ref|ZP_07704741.1| lysine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308435095|gb|EFP58927.1| lysine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 1055

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/281 (19%), Positives = 104/281 (37%), Gaps = 18/281 (6%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RT    D+  +          G  V ++G V  +R  GG+ F+ + +     Q +A  D 
Sbjct: 591 RTARIEDVVTAHGRLPADHRTGERVSVTGRVRALRDFGGVSFVVLDEDGARLQAMATRDV 650

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E  +  R    L   G ++S + E + +     ++ +     ++ +        +  
Sbjct: 651 TPAEKYEHWRHWIDL---GDIVSVTGEIVTSKHA--ELSVHVSDWQMAAKCLSPIPDLHS 705

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
               P   R + R LDL  +    + + +R+R + + R    A  + E  TP+L A    
Sbjct: 706 PFCDP-DARIRNRSLDLIVNRDSMDTLLRRSRGVRAFRDAFDALGYTEVETPMLQAVHGG 764

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F           + +  AP+ Y + L   G  + F++   FR+E   +   P EF
Sbjct: 765 ASARPFKTHINAYGMELF-MRIAPELYLKRLAVGGMQKVFELNRNFRNEGADATHNP-EF 822

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
             L+   ++ +   + +    VL  V    + G        
Sbjct: 823 TSLEAYDAYGDYLTMRDLTREVLLAVARAVNGGEFAERPRP 863



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 54/169 (31%), Gaps = 28/169 (16%)

Query: 399  CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
                 G        A +    +  EL  +        + +DFP      E   +  AH  
Sbjct: 905  VCAAHGVDAPREKSAGELVVELYDEL--VEGQTMFPTFYIDFPV-----ETSPLARAHR- 956

Query: 459  FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS---- 514
                          D     + ++DLV  G EI +            +  +   +     
Sbjct: 957  -------------GDPR--LSERWDLVAFGAEIGTAYSELVDPIEQRKRLTEQSLKAAAG 1001

Query: 515  KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 +       A +  MPP GG+  G+DR +M++LGA  +R    FP
Sbjct: 1002 DVEAMSLDEAFLSALEYAMPPTGGLGIGVDRSIMMMLGAP-IRATLAFP 1049


>gi|150016995|ref|YP_001309249.1| aspartyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149903460|gb|ABR34293.1| aspartyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 429

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 18/257 (7%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V L GWVH++R    + F+ +RD  GI Q+V        E  K +R E  + + G+V 
Sbjct: 15  ETVLLKGWVHKIRDLSHVSFILLRDKSGIIQLVCTK-----EQIKGLRLENAVEVTGIVR 69

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVF---GEREYPESIRFKYRFLDLRR 135
                  N     G +E+    I+I        LP      + +     +  YR + LR 
Sbjct: 70  E------NEKAPKG-MEIEVSDIKIAGTVYYDKLPFEIQSFKEKAALETQLDYRTISLRI 122

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
                    +  I  + R      +F E  TP +T S  EG  +    +  N+ +F A  
Sbjct: 123 PKKKAIFKVQNEIEEAFRMFFKGNDFEEIHTPKITHSGTEGGSEMFTVNYFNRRAFLA-- 180

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTME 254
           Q+PQ +KQ+++ +GF+R F++   +R E   + R   E+  LD+EM F+ ++ D++   E
Sbjct: 181 QSPQFWKQMMVGAGFERVFEVGYAYRAELHNTWRHLNEYVSLDVEMGFIKDETDLMEMEE 240

Query: 255 NVLRGVFEEFSNGNTVS 271
           N +R +++  +      
Sbjct: 241 NFIRYLYKHLNEKCAEE 257



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 4/93 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +DL+  G EI +GG R H  E++      +G+        F      F+ GMPPHGG
Sbjct: 341 TKSFDLIFKGVEITTGGQRIHDYEMLKAKMERLGLKL----EDFAFYLDTFKYGMPPHGG 396

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            A G++RI M +L   N+RE SLFP        
Sbjct: 397 FAIGLERITMQILNLGNIREASLFPRDMKRLTP 429


>gi|260812197|ref|XP_002600807.1| hypothetical protein BRAFLDRAFT_229393 [Branchiostoma floridae]
 gi|229286097|gb|EEN56819.1| hypothetical protein BRAFLDRAFT_229393 [Branchiostoma floridae]
          Length = 373

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/317 (17%), Positives = 119/317 (37%), Gaps = 42/317 (13%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           GWV  +R    ++FL + D   +  +                        G  ++     
Sbjct: 1   GWVRSIRAQKEVLFLHLNDGSCLAHLQVVGTP---------DMGSSDLSYGSAVAVEGRL 51

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
             +      +E  A ++E++        P   ++ +      ++  L  R ++    +  
Sbjct: 52  FPSAHPGQDVEFHADRLEVIGSCNAKEFPFKAKKRHTMEYSRQFPHLRARTNSFAALLRI 111

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------SFY---ALP 195
           R++  +++      E +IE  TP+++++  EGA +     +++Q        F+   A  
Sbjct: 112 RSQAASAIHKFFQDEGYIEVHTPVISSNDCEGAGELFQVEQISQDSGKDTKHFFDVPAFL 171

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTME 254
               Q +  +MAS   R +   P FR E     R   EFY ++ E++F  +Q+D++  +E
Sbjct: 172 TVSGQLQLEVMASALSRVYVFGPTFRAERSLGRRHLSEFYMVEAELAFTQQQEDVMEVIE 231

Query: 255 NVLRGVFEEFSNGNTVSNN---------------------FLRICYDDAIRRYGTDKPDL 293
            +++   E+         +                     F+R+ Y +AI+    +  + 
Sbjct: 232 MMVKQPTEQILALCPEDLHLFYKFVSPGHREVVEKILTSRFIRMTYTEAIQILTKNSENF 291

Query: 294 RN-PIIMHNV-TEHFVH 308
           +  P   H++  EH  H
Sbjct: 292 QFKPEWGHDLQKEHERH 308


>gi|13508016|ref|NP_109965.1| lysyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501019|sp|P75500|SYK_MYCPN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1674257|gb|AAB96206.1| lysyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 489

 Score =  162 bits (410), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 69/348 (19%), Positives = 130/348 (37%), Gaps = 26/348 (7%)

Query: 6   THSCGDLGVSDVGS--------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           THS      +             V L+G +  +R      F+ I+D  G  Q+  N  + 
Sbjct: 35  THSAASFQKAFANQSDAELKQYQVILTGRIIALRQ----TFIIIQDFSGKMQLYINKKT- 89

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E+ +   +   L   G  +  +   +     TG + L+ ++++I++   +   P    
Sbjct: 90  APELFEYFNNYIDL---GDQIVATGHPMMTK--TGVLTLNVERLQIVAKCLQ-TPPEKWH 143

Query: 118 REYPESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPE 175
                  R + R+LDL  +    +  +KRT+II ++R  +    F+E  TPIL A     
Sbjct: 144 GLTDPEARARKRYLDLTYNRAQVEVFLKRTQIITAIRTFLNEAGFLEVETPILQAVLGGA 203

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            A+ F       +G FY L  A +   + L+  G  + +++   FR+E   +   P EF 
Sbjct: 204 NAKPFKTHYNALKGDFY-LRIANEIALKKLIVGGLPKVYEMGRMFRNEGVDTTHNP-EFT 261

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            ++M  +  +   +++  EN+++ V +  +     S N+     D A         DL  
Sbjct: 262 SIEMYQANADYAVMMDLTENLIKFVCKTLNQW---SFNWNGQTLDLAKPFKKVKMVDLIC 318

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
            +   N  +          +K   V                   FC+ 
Sbjct: 319 QVTGVNFDDVKDDQTAIALAKQHKVELKKHEQNKQHIINRFFEQFCEH 366



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 5/109 (4%)

Query: 460 TMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVM----LQAFSNVGIS 514
           T     +  L   D  + +   +++L  N  E+A+     +          Q      + 
Sbjct: 375 THYPKAVSPLAKQDPHNPEFTERFELFINTKELANAYSELNDPLEQRARFEQQLQEKRMG 434

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +           A   G+PP GG+  G+DR+VMLL    ++R+V  FP
Sbjct: 435 NDEASELDESFLDALSFGLPPTGGLGIGVDRLVMLLCECSSIRDVVFFP 483


>gi|15896232|ref|NP_349581.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|15026034|gb|AAK80921.1|AE007794_13 Aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510387|gb|ADZ22023.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 430

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 67/282 (23%), Positives = 125/282 (44%), Gaps = 21/282 (7%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M +   +   D+     G  + L GW+H++   G + F+ +RD  GI Q+VA       E
Sbjct: 1   MKK---NYVKDVFHMSEGEEITLQGWIHKIYDLGHVNFVRLRDKTGIVQLVAQK-----E 52

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF---GE 117
               +R+E  + + G++      + N   I G +E+  ++IE+L       LP      +
Sbjct: 53  QLAGLRNETCIKVKGVL------SKNDKAIDG-MEVQVKEIEVLGKVYYDKLPFDINGKK 105

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                  +  +R + L++ ++      +  I    R  +   NF E  TP + AS  EG 
Sbjct: 106 INAALETQLDHRNVSLKKPSVMAVFKIQEEIGECFRKFLKLNNFTEVHTPKILASGTEGG 165

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +    +  +  +F A  Q+PQ YKQ+++  GF++ F++   +R E   + R   E+  L
Sbjct: 166 SELFTVNYFDHRAFLA--QSPQFYKQMMVGVGFEKVFEVGHAYRAELHNTYRHLNEYVSL 223

Query: 238 DMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
           D EM F+ ++++I++  E  +  +FE              I 
Sbjct: 224 DAEMGFIEDENEIMDLEEGFINYLFENLRETCARELKMYNIT 265



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 4/128 (3%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           ++ +E+   DF +               +D +   +  +DL+  G EI +GG R H  ++
Sbjct: 307 KYVKEKYDSDFVYLTKYPLSKRPMYTMPDDEIEGASKSFDLIYKGLEITTGGQRIHDHDM 366

Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +++A  N G         F      F+ GMPPHGG A G++R+ M +LG +N+RE SL P
Sbjct: 367 LVEAIKNKGFKA----EEFEFYTENFRYGMPPHGGFAIGLERLTMQILGLENIREASLLP 422

Query: 564 MSQNFCDL 571
                   
Sbjct: 423 RDMKRITP 430


>gi|289447250|ref|ZP_06436994.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis CPHL_A]
 gi|289420208|gb|EFD17409.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis CPHL_A]
          Length = 1172

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D  + V +SG + R+R +GG +F  +RD  G  QV+ +        A   
Sbjct: 711 SHTVAQALAADHQASVSVSGRIMRIRNYGGALFAQLRDWSGEMQVLLDNSRLDQGCAADF 770

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  +     +   TG   L      ++      PLP   +       R
Sbjct: 771 NAATDL---GDLVEMTGHMGASK--TGTPSLIVSGWRLIGKCLR-PLPNKWKGLLDPEAR 824

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR F+  
Sbjct: 825 VRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTH 884

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 885 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 942

Query: 244 VEQDDILNTMENVL 257
            +  + ++    ++
Sbjct: 943 ADYLEWIDGCRELI 956



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 69/192 (35%), Gaps = 32/192 (16%)

Query: 380  NIVNTEAIRVRLDMQDGDS----CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435
            +   +EA+  R+D   G +      + AG P +    A      + + L  + C   +  
Sbjct: 1000 HDAISEALGERIDADTGLTTLRKLCYAAGVPYRTQWDAGAVVLELYEHL--VECRTEQPT 1057

Query: 436  WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            + +DFP             + +P T P                A ++DLV  G E+ +  
Sbjct: 1058 FYIDFP------------TSVSPLTRPHRS---------KRGVAERWDLVAWGIELGTAY 1096

Query: 496  IRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                      +      +                 +A +  MPP GG+  GIDR+VML+ 
Sbjct: 1097 SELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLIT 1156

Query: 552  GAKNVREVSLFP 563
            G  ++RE   FP
Sbjct: 1157 GR-SIRETLPFP 1167


>gi|260186588|ref|ZP_05764062.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
          Length = 1111

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D  + V +SG + R+R +GG +F  +RD  G  QV+ +        A   
Sbjct: 650 SHTVAQALAADHQASVSVSGRIMRIRNYGGALFAQLRDWSGEMQVLLDNSRLDQGCAADF 709

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  +     +   TG   L      ++      PLP   +       R
Sbjct: 710 NAATDL---GDLVEMTGHMGASK--TGTPSLIVSGWRLIGKCLR-PLPNKWKGLLDPEAR 763

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR F+  
Sbjct: 764 VRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTH 823

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 824 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 881

Query: 244 VEQDDILNTMENVL 257
            +  + ++    ++
Sbjct: 882 ADYLEWIDGCRELI 895



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 69/192 (35%), Gaps = 32/192 (16%)

Query: 380  NIVNTEAIRVRLDMQDGDS----CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435
            +   +EA+  R+D   G +      + AG P +    A      + + L  + C   +  
Sbjct: 939  HDAISEALGERIDADTGLTTLRKLCYAAGVPYRTQWDAGAVVLELYEHL--VECRTEQPT 996

Query: 436  WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            + +DFP             + +P T P                A ++DLV  G E+ +  
Sbjct: 997  FYIDFP------------TSVSPLTRPHRS---------KRGVAERWDLVAWGIELGTAY 1035

Query: 496  IRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                      +      +                 +A +  MPP GG+  GIDR+VML+ 
Sbjct: 1036 SELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLIT 1095

Query: 552  GAKNVREVSLFP 563
            G  ++RE   FP
Sbjct: 1096 GR-SIRETLPFP 1106


>gi|296103067|ref|YP_003613213.1| asparaginyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295057526|gb|ADF62264.1| asparaginyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 441

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 68/419 (16%), Positives = 141/419 (33%), Gaps = 68/419 (16%)

Query: 27  VHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSEWVLCIDGLVMSRSA 82
           +   R    GI FL + D      V A  +++     +    + +   + + G+V++   
Sbjct: 1   MRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNDDVLHLTTGCSVIVTGVVVASPG 60

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
           +  +        E+ A  +E+    E+        + +      +   L  R + +    
Sbjct: 61  QGQS-------FEIQATAVEVTGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVA 113

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--------------Q 188
             R  +  ++      + +   STP++TAS  EGA +    S ++               
Sbjct: 114 RVRHTLAQALHRFFDEQGYFWVSTPLITASDTEGAGEMFRVSTLDLENLPRTPEGKVDFD 173

Query: 189 GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             F+   A      Q      A    + +   P FR E+  + R   EF+ L+ E++F +
Sbjct: 174 KDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFAD 233

Query: 246 QDDILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRICYDDAIR 284
            +D+    E +L+ VF+                            VS++F ++ Y DA+ 
Sbjct: 234 LNDVAGLAEAMLKYVFKAVLEERADDMKFFAERVDNEAIARLERFVSSDFAQVDYTDAVA 293

Query: 285 RYGTDKPDLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
                     NP+    ++ +EH  +   + F   + V    +            +AF  
Sbjct: 294 ILEKCGEKFENPVYWGVDLSSEHERYLAEKHFKAPVVVKNYPKDI----------KAFYM 343

Query: 343 RMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFF 401
           R+NE        G       +   G    +G   +   +   +A    + +   D  ++
Sbjct: 344 RLNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMQEMGLNPADYSWY 395



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+      +G++       +      
Sbjct: 345 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMQEMGLNPAD----YSWYRDL 398

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 399 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 437


>gi|255720006|ref|XP_002556283.1| KLTH0H09394p [Lachancea thermotolerans]
 gi|238942249|emb|CAR30421.1| KLTH0H09394p [Lachancea thermotolerans]
          Length = 601

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 68/291 (23%), Positives = 118/291 (40%), Gaps = 22/291 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAK 63
           RT    DL  +D G  V +   VH  R  G  ++FL +R    + Q +A  ++      +
Sbjct: 138 RTK-LEDLSEADDGKEVLIRARVHNSRQQGATLVFLTLRQQAQLIQALAKSNAEGTISKQ 196

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIIT----GQIELSAQKIEILSVAEELPLPVFGERE 119
            V+    +  + +V+ +         I       +E+   +I  +S A +    +  +  
Sbjct: 197 MVKWIGSVNPESIVLVKGVVKKVEEPIKSATVQNLEIHITQIHTISEAPQQLPILIEDAS 256

Query: 120 -------------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                             R   R +DLR  T       ++ +    R  +    F+E  T
Sbjct: 257 RSDAEAETAGLPVVNLDTRLDARVIDLRTATNQAIFRIQSGVCELFREFLAKRKFVEIHT 316

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P L  +  EG  +    +     S+ A  Q+PQ YKQ L+A+ F+R F++AP FR E+  
Sbjct: 317 PKLLGAPSEGGANVFEVTYFKGKSYLA--QSPQFYKQELIAADFERVFEVAPVFRAENSN 374

Query: 227 SDRLPGEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           + R   EF  LD+EM+F E  D +++ +  +   +F E           +R
Sbjct: 375 THRHMTEFIGLDLEMAFEEHYDEVIDVLSELFVFIFSELKTRYAKEIALVR 425


>gi|120434466|ref|YP_860168.1| asparaginyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117576616|emb|CAL65085.1| asparaginyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 480

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 51/274 (18%), Positives = 104/274 (37%), Gaps = 31/274 (11%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDGLVMSR 80
           + GWV   R +    F+ I D   I  +    D      ++ K +     + + G +   
Sbjct: 21  VKGWVRSFRSNR---FIAINDGSTIKNLQCVIDFENTDEDLIKRINVGAAISVKGTLKES 77

Query: 81  SAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                       ++E+   +++IL  A  EE+ L +   +++      +   L +R +T 
Sbjct: 78  QGSQ-------QRVEVDVTELKILGDANPEEVKLTILSPKKHSLEKLREQAHLRVRTNTF 130

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ---------- 188
              +  R+++  ++      +NF   +TPI+T S  EGA +    S ++           
Sbjct: 131 GAVMRVRSKLSFAVHKYFQEKNFYYVNTPIITGSDAEGAGEMFRVSALDMKNPPKNEDGS 190

Query: 189 ----GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 F+          Q +    A G  + +   P FR E+  + R   EF+ ++ E+
Sbjct: 191 INYKEDFFGKETNLTVSGQLEAETFALGLGQVYTFGPTFRAENSNTSRHLAEFWMIEPEV 250

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +F + D  ++  E+ ++ V             FL
Sbjct: 251 AFCDLDQNMDLAEDFIKYVLRYVIENCKEDLEFL 284



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 41/118 (34%), Gaps = 14/118 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M           D  +++A   D++  G  EI  G  R    +V+ +  +
Sbjct: 372 DYPANIKAFYMRMNE-------DGKTVRAM--DILFPGIGEIVGGSQREERLDVLKEKMA 422

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + I     E          + G   H G   G +R+V    G  N+R+V  FP +  
Sbjct: 423 ELDIP----EEELWWYLDTRKFGTCVHSGFGLGFERLVQFTTGMGNIRDVIPFPRTPQ 476


>gi|296439737|sp|B2HR11|LYSX_MYCMM RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
          Length = 1105

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 109/254 (42%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      +D  + V +SG + RVR +GG++F  +RD  G  QV+ +      E  ++ 
Sbjct: 651 THTVAQAMDADDQASVSVSGRILRVRNYGGVLFAHLRDWSGEIQVLLDNSR--LEQGRAA 708

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                + +  LV          +  TG   L  ++  ++      PLP   +       R
Sbjct: 709 DFNAAIDLGDLVEMTG---QMGSSKTGTRSLIVRRWRLIGKCLR-PLPNKWKGLTDPEAR 764

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R++DL  +   + ++  R+ ++ S+R  + A+ FIE  TPIL        AR F+  
Sbjct: 765 VRTRYVDLAVNAESRALITARSAVLRSVRETLSAKGFIEVETPILQQVHGGATARPFITH 824

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 825 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 882

Query: 244 VEQDDILNTMENVL 257
            +    +++   ++
Sbjct: 883 ADYRVWIDSCRELI 896



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 67/196 (34%), Gaps = 32/196 (16%)

Query: 376  AKHLNIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNC 431
             K ++   +EA+  ++D     +      D    P +    A      + + L  +    
Sbjct: 929  VKTVHDAVSEALGEQIDADTDLATLRRLADAARIPYRAQWDAGAVVLELYEHL--VESRT 986

Query: 432  FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +  + +DFP             + +P T P      +         A ++DLV  G E+
Sbjct: 987  EQPTFYLDFP------------TSVSPLTRPHRSKPGI---------AERWDLVAWGVEL 1025

Query: 492  ASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             +                   +                 +A +  MPP GG+  G+DR+V
Sbjct: 1026 GTAYSELTDPVEQRLRLEEQSLLAAGGDPEAMQLDEDFLQAMEYAMPPTGGLGMGVDRVV 1085

Query: 548  MLLLGAKNVREVSLFP 563
            ML+ G  ++RE   FP
Sbjct: 1086 MLITGR-SIRETLPFP 1100


>gi|183982461|ref|YP_001850752.1| lysyl-tRNA synthetase 2 LysX [Mycobacterium marinum M]
 gi|183175787|gb|ACC40897.1| lysyl-tRNA synthetase 2 LysX [Mycobacterium marinum M]
          Length = 1097

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 109/254 (42%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           TH+      +D  + V +SG + RVR +GG++F  +RD  G  QV+ +      E  ++ 
Sbjct: 643 THTVAQAMDADDQASVSVSGRILRVRNYGGVLFAHLRDWSGEIQVLLDNSR--LEQGRAA 700

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                + +  LV          +  TG   L  ++  ++      PLP   +       R
Sbjct: 701 DFNAAIDLGDLVEMTG---QMGSSKTGTRSLIVRRWRLIGKCLR-PLPNKWKGLTDPEAR 756

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R++DL  +   + ++  R+ ++ S+R  + A+ FIE  TPIL        AR F+  
Sbjct: 757 VRTRYVDLAVNAESRALITARSAVLRSVRETLSAKGFIEVETPILQQVHGGATARPFITH 816

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 817 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 874

Query: 244 VEQDDILNTMENVL 257
            +    +++   ++
Sbjct: 875 ADYRVWIDSCRELI 888



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 67/196 (34%), Gaps = 32/196 (16%)

Query: 376  AKHLNIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNC 431
             K ++   +EA+  ++D     +      D    P +    A      + + L  +    
Sbjct: 921  VKTVHDAVSEALGEQIDADTDLATLRRLADAARIPYRAQWDAGAVVLELYEHL--VESRT 978

Query: 432  FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
             +  + +DFP             + +P T P      +         A ++DLV  G E+
Sbjct: 979  EQPTFYLDFP------------TSVSPLTRPHRSKPGI---------AERWDLVAWGVEL 1017

Query: 492  ASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             +                   +                 +A +  MPP GG+  G+DR+V
Sbjct: 1018 GTAYSELTDPVEQRLRLEEQSLLAAGGDPEAMQLDEDFLQAMEYAMPPTGGLGMGVDRVV 1077

Query: 548  MLLLGAKNVREVSLFP 563
            ML+ G  ++RE   FP
Sbjct: 1078 MLITGR-SIRETLPFP 1092


>gi|171682338|ref|XP_001906112.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941128|emb|CAP66778.1| unnamed protein product [Podospora anserina S mat+]
          Length = 619

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 54/269 (20%), Positives = 113/269 (42%), Gaps = 18/269 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIR------------DHYGITQVVANPDSACF 59
           G  D  + +R++  ++  R  G  +IF D+R                  Q+VA    +  
Sbjct: 121 GEDDKNTEIRIAARIYNKRASGSKLIFYDVRTSADTKSIGTQIQIVCQAQLVAEGAPSFE 180

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  +++R   V+ I G     + +   A    G++ + A +I++LS    +   V     
Sbjct: 181 QQHENIRRGDVIGIIGYAGRTNPKNRLAEGKEGELSIFATEIKLLSPCLHMLPSVRFPF- 239

Query: 120 YPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
                R + R+LD L  D   + + +R+R++  +R       FIE  TP++ A +    A
Sbjct: 240 ADAEQRARMRYLDMLWNDRSRETLWQRSRMVRYIRDFFHERRFIEVETPMMHAIAGGATA 299

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
             F+          Y +  AP+ + + ++   F + F++   FR+E       P EF  +
Sbjct: 300 LPFITHHNDLDIDMY-MRVAPELFLKKMIVGQFGKVFEMGKNFRNEGVDLTHNP-EFTSI 357

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           +   ++ +  D++N  E ++  + +  + 
Sbjct: 358 EFYWAYADMYDLMNITEELVSSLVKHLTG 386



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 4/93 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++      EIA+     +        F      K+  ++           A +
Sbjct: 496 KKGLCERFEAFVCKKEIANAYTELNNPFDQRLRFEEQARQKDQGDDEAQLVDESFLNALE 555

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+PP GG   GIDR+ M L    ++REV  FP
Sbjct: 556 YGLPPTGGWGLGIDRLAMFLTNNYSIREVLAFP 588


>gi|288919244|ref|ZP_06413580.1| lysyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288349339|gb|EFC83580.1| lysyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 511

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 60/345 (17%), Positives = 124/345 (35%), Gaps = 20/345 (5%)

Query: 4   YRTHSCGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           YRT S      + + G  VRL+G V   R  GG++F  I+D  G  QV  + D    +  
Sbjct: 14  YRTDSVTAAAGAAEDGEVVRLAGRVVLWRRMGGLVFGHIQDRAGRVQVSLSRDELGVDTF 73

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +       +   G  +  + +        G+  + A ++ +L+         +      E
Sbjct: 74  QEWARAVKI---GDFVGVTGKLYTTR--RGERTVGASELVVLNRTVRALPDKWLGLSNVE 128

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFL 181
           +   +     L  +   +    R R I+ +R  +   +F+E  TP+L  A+S   AR F+
Sbjct: 129 ARLRRRYLDLLVNNDSRERFRIRARTISRIRRFLDDNDFLEVETPMLQEAASGAAARPFI 188

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                    FY L  +P+ + + ++    DR +++   FR+E         EF  L+   
Sbjct: 189 THHNALGEDFY-LRISPETFLKRVVVGSLDRVYELGRNFRNEGMD-PSHLQEFTMLEWYA 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D +  +  ++  V ++             + Y      +G + P+L     +  
Sbjct: 247 AYWDYRDNMRFVREMILAVLDDVFGS-------RTVTYGGVKLDFGAEWPELDYRAEVAR 299

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                   +  V   + ++        +            D + +
Sbjct: 300 ----HSGIDLTVVRDLPTLRARIAELGLEVDDAASYAGLVDLLYK 340



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 63/170 (37%), Gaps = 13/170 (7%)

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF---AHNPFTMPQ 463
           L         R  IA ELG+   +   +  ++D   Y+       I      H+P  +  
Sbjct: 305 LTVVRDLPTLRARIA-ELGLEVDDAASYAGLVDL-LYKKTVRPHLIQPCFLLHHPAELVP 362

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF- 522
             +     +D   +    + +V NG+E+              +        +   ++   
Sbjct: 363 --LARRSDSDPSQL--DMFQVVVNGWELVKAYSELVDPVEQRRRLEEQAELRAAGDDETM 418

Query: 523 ---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                   A + GMPP  G+  GIDR++ LL  A  +REV LFP+ ++  
Sbjct: 419 MLEEDFIEAMEYGMPPMSGLGIGIDRLIALLTDAPTLREVVLFPLMRDSR 468


>gi|225677864|gb|EEH16148.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 968

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 74/366 (20%), Positives = 137/366 (37%), Gaps = 28/366 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHY-GITQVVANP----DSACFEIAKSV 65
           + V  VG  V     VH VR     ++F+  R        V+A       +   + A+ +
Sbjct: 154 ITVDLVGQEVMFRARVHHVRRMSSKLVFIVFRQQIITFQGVLAEKAGQVSTFMIQWAEHI 213

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL---------SVAEELPLPVFG 116
           R   ++ + G +       +   I    +EL  +K+ ++         SV E        
Sbjct: 214 RVGSIVKVKGKLSKSLVPVVGCTIH--DVELDIEKLHVIVRREEPVPFSVYEAELTTREE 271

Query: 117 EREYP------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                      +  R   R LDLR D        ++ + N     + ++ FIE  TP L 
Sbjct: 272 HTHDGRRNHILDKTRLSNRILDLRTDASQSIFRIQSAVSNLFHSALDSQGFIEIHTPKLQ 331

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            S+ E        S  ++ +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R 
Sbjct: 332 GSATESGASVFEVSYFSRAAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRH 389

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             E+  LD+EM+  E   + L  +++VL+ +F+          + ++  +      +   
Sbjct: 390 LTEYTGLDIEMAIDEHYHEALEVIDSVLKEIFKGIYVRYRREVDIIKHQFPHEDLVWLDK 449

Query: 290 KPDLRN--PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
            P +R    I + N +      E    ++ L       +  +  +    +    D+    
Sbjct: 450 TPVIRFSDGIKLLNDSGWRRDGEELPTNEDLGTRDEMRLGELIKEKYHTDYYILDKYPRV 509

Query: 348 ARSQGQ 353
           AR    
Sbjct: 510 ARPFYA 515



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 49/217 (22%), Positives = 81/217 (37%), Gaps = 30/217 (13%)

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD-GDSCFFIAGDPLKFCSF 412
            G+ Y+ +R  E   +    P    + +  T  IR    ++   DS +   G+ L     
Sbjct: 422 KGI-YVRYR-REVDIIKHQFPHEDLVWLDKTPVIRFSDGIKLLNDSGWRRDGEELPTNED 479

Query: 413 AADARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
               R+ +   LG +I        +I+D           K      PF   +        
Sbjct: 480 LG-TRDEM--RLGELIKEKYHTDYYILD-----------KYPRVARPFYAMED------- 518

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
                     +D+   G EI SGG R H  +++ +   + GI    +E+        F+ 
Sbjct: 519 -PENPEFTNSFDIFVRGQEIVSGGQRIHDEKILEKRMRDAGIDPLTMED----YLEGFRW 573

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           G PPH G   G++R+VML+L   N+R  S+F      
Sbjct: 574 GAPPHAGAGIGLERLVMLILKLGNIRLASMFHRDPKS 610


>gi|171687685|ref|XP_001908783.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943804|emb|CAP69456.1| unnamed protein product [Podospora anserina S mat+]
          Length = 167

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 8/167 (4%)

Query: 442 FYEWNEEEK-------KIDFAHNPFTMP-QGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
            +  N E              H+PFT P       L   + L+ +A  YDLV NG E+  
Sbjct: 1   MFTPNTETDPGQGGRSGFSATHHPFTAPLTDADVELMVTNPLAARADHYDLVLNGVELGG 60

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  R H +++    F  +    +    +F  L  A + G PPH G A G DR+  +L G 
Sbjct: 61  GSRRIHTAKMQEYVFREILKMSDKGVKQFSHLLEALRAGCPPHAGFALGFDRLCAVLTGT 120

Query: 554 KNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILK 600
            +VR+V  FP S    DL + SP  ++ E+L    L      +K  +
Sbjct: 121 DSVRDVIAFPKSMKGEDLTVRSPGKITSEELGTYHLAFRPKEEKKKE 167


>gi|15639597|ref|NP_219047.1| asparaginyl-tRNA synthetase [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025835|ref|YP_001933607.1| asparaginyl-tRNA synthetase [Treponema pallidum subsp. pallidum
           SS14]
 gi|6094410|sp|O83618|SYN_TREPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|226695838|sp|B2S3J9|SYN_TREPS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|3322907|gb|AAC65585.1| asparaginyl-tRNA synthetase (asnS) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018410|gb|ACD71028.1| asparaginyl-tRNA synthetase [Treponema pallidum subsp. pallidum
           SS14]
          Length = 523

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 89/303 (29%), Gaps = 46/303 (15%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--------------------SA 57
           G    + GWV   R     +F+ + D      +                           
Sbjct: 18  GQHECVHGWVRSKRETKRAVFISLSDGSCPDTLQVTVPLPECSASLSSGAQAEQIPNVRD 77

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
                +++         G  +      + +      +EL A  + +L  A     P+  +
Sbjct: 78  AVLQGETLAQTLKRVTTGACIRAEGALVPSPGAGQALELRACNLTVLGEAPAETYPLQKK 137

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R  +  L  R  T       R+ +  ++       +F    TPI+TAS  EGA
Sbjct: 138 SHSFEFLRA-HAHLRARTSTFAACARVRSALAGAVHRFFSERHFQYVHTPIITASDCEGA 196

Query: 178 RDFLVPSRVNQ----------------------GSFY---ALPQAPQQYKQLLMASGFDR 212
            +    +  +                         F+   A      Q +    A    R
Sbjct: 197 GELFRVTTFDPVRIAREAHAAGAAGNPYALTYADDFFGKAARLTVSGQLQGEAYALALTR 256

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN 272
            +   P FR E+  + R   EF+ ++ E++F    D ++  E  L  +            
Sbjct: 257 IYTFGPTFRAENSNTSRHLSEFWMVEPEIAFARITDCMDVAEEFLAYLLRAALKDCAQDI 316

Query: 273 NFL 275
            FL
Sbjct: 317 AFL 319



 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 50/150 (33%), Gaps = 26/150 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +          + D+P     +E K        F M           D  ++++  
Sbjct: 398 HECFLTEEVFHGPVIVYDYP-----KEIK-------AFYMK-------LNADGTTVRSM- 437

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  EI  G  R    EV+       G         +       + G  PH G  
Sbjct: 438 -DLLVPGLGEIMGGSEREEQFEVLCARIRASGFDPHD----YRWYTDLRRFGTAPHAGFG 492

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G +R++  + G  N+R+V  FP +    D
Sbjct: 493 LGFERLLQYVTGLGNIRDVIPFPRTPRTAD 522


>gi|254821219|ref|ZP_05226220.1| lysyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 1089

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 105/263 (39%), Gaps = 18/263 (6%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS----ACFEI 61
           +H+      +D    + +SG + R+R +GG++F  +RD  G  QV+ +          + 
Sbjct: 632 SHTVAAALDTDDRETITVSGRILRIRDYGGVLFAHLRDWSGEMQVLLDNSQLQRGRTADF 691

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             ++    ++ + G +      T           L      ++      PLP   +    
Sbjct: 692 TAAIDLGDLVEVSGHMGFSKKGTR---------SLIVGDWRMIGKCLR-PLPNKWKGLTD 741

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
              R + R++DL  +   + ++  R+ ++ S+R  +  + FIE  TPIL        AR 
Sbjct: 742 PEARVRTRYVDLAVNPESRELITARSEVLRSVRQTLFDKGFIEVETPILQQIHGGATARP 801

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          + L  AP+ Y + L   G +R F++   FR+E       P EF  L+ 
Sbjct: 802 FVTHINTYDMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEA 859

Query: 240 EMSFVEQDDILNTMENVLRGVFE 262
             +  +    ++    +++   E
Sbjct: 860 YQAHADYKVWIDGCRELIQNAAE 882



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 56/162 (34%), Gaps = 28/162 (17%)

Query: 406  PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
            P +    A      + + L  +     E  + +DFP             + +P T P   
Sbjct: 947  PYRAHWDAGAVVLELYEHL--VEDRTEEPTFYIDFP------------TSVSPLTRPHRS 992

Query: 466  MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENR 521
                         A ++DLV  G E+A+            +      +            
Sbjct: 993  ---------EPGVAERWDLVAWGVELATAYSELTDPVEQRRRLQEQSLLAAGGDPEAMEL 1043

Query: 522  FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 +A +  MPP GG+  G+DR+VML+ G  ++RE   FP
Sbjct: 1044 DEDFLQAMEYAMPPTGGLGMGVDRLVMLITGR-SIRETLPFP 1084


>gi|311740160|ref|ZP_07713992.1| lysine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304715|gb|EFQ80786.1| lysine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 525

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 66/341 (19%), Positives = 130/341 (38%), Gaps = 31/341 (9%)

Query: 19  SFVR--LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-G 75
           + V   ++G +  +R  G + F  ++D  G          +  E+ K     W   +D G
Sbjct: 75  TEVTHAIAGRLIFMRNTGKLCFATLQDGDGTQ---VQAMLSLAEVGKERLDAWKSDVDLG 131

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR- 134
             +S     I++    G++ +   +  + + +       F   +  E  R + R+ DL  
Sbjct: 132 DFISVRGRVISSR--RGELSIMVSEWTMAAKSLRPLPVSFA--DMAEDTRVRQRYNDLII 187

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           R+   KN + R +++ ++R  + +++F+E  TP+L        AR F+  S       Y 
Sbjct: 188 REEARKNAMIRVKVMRALRNYLESQDFVEIETPMLQTLHGGAAARPFITHSNALDIDLY- 246

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y +  +  G DR F+I   FR+E       P EF  L+   ++ + DD     
Sbjct: 247 LRIAPELYLKRAVVGGIDRVFEINRNFRNEGVDRSHSP-EFAMLETYAAWGDYDDCARMT 305

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN--------VTEH 305
              ++ V  +     TV+     +         G + P++     ++           E 
Sbjct: 306 RESIQAVARDVFGSTTVT-----LADGTEFDFGGEEWPEIEMYPSLNEALQRKFPGQPEV 360

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
            + ++      I           +P  GG G+    + + E
Sbjct: 361 TIDTDVETLKGIAD----VIGLDVPKDGGWGHGKLVEEIWE 397



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 ++DL   GFE+A+G        +  + F +        ++           A +
Sbjct: 427 KPGVTEKWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMVLDEDFLAAME 486

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP  G   G+DR++M L G   +RE  LFP
Sbjct: 487 QGMPPTAGTGMGMDRLLMALTGLG-IRETVLFP 518


>gi|170579277|ref|XP_001894758.1| lysyl-tRNA synthetase [Brugia malayi]
 gi|158598519|gb|EDP36395.1| lysyl-tRNA synthetase, putative [Brugia malayi]
          Length = 597

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 58/282 (20%), Positives = 114/282 (40%), Gaps = 16/282 (5%)

Query: 26  WVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
            +   R  G  +IF D+       QV+AN      +  +S  S       G ++  +   
Sbjct: 138 RIFSKRESGGKLIFYDLHGEGTRLQVLANARFHSGD--ESFDSLHDRIKRGDIIGVNG-- 193

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIV 143
             A   +G++ +  ++I  L+      LP        +  R++ R+LDL  +T +    V
Sbjct: 194 YPARSKSGELSIIPREIVQLTPCL-HMLPHTHFGLKNQETRYRMRYLDLIMNTDVKNKFV 252

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYK 202
            R+R I+ +R  +    F+E  TP++   +    A+ F+          Y L  AP+ Y 
Sbjct: 253 TRSRTISFLRRYLDNLGFLEVETPMMNLIAGGATAKPFITHHNDLDMDLY-LRVAPELYL 311

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           ++L+  G DR ++I   FR+E       P EF   +  M++ + +D++   E++L  +  
Sbjct: 312 KMLVVGGIDRVYEIGRVFRNEGIDQTHNP-EFTTCEFYMAYADYEDLMKITEDMLSRLVY 370

Query: 263 EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                  +  +       + I      + D   P    ++ +
Sbjct: 371 SIHGTYKIQYH------PNGIGEEPVYEVDFTPPFQRVDIYD 406



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 4/95 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++L     EI +     +        F      K+  ++           A + 
Sbjct: 488 PGLTERFELFVVTKEIVNAYTELNDPLTQRLRFEEQAEQKQAGDDEAQIIDENFCTALEY 547

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G+PP  G   GIDR+ M+L  + N++EV  FP  +
Sbjct: 548 GLPPTAGWGIGIDRLTMILTDSNNIKEVLFFPAMR 582


>gi|86131438|ref|ZP_01050036.1| asparagine-tRNA ligase [Dokdonia donghaensis MED134]
 gi|85817883|gb|EAQ39051.1| asparagine-tRNA ligase [Dokdonia donghaensis MED134]
          Length = 480

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 103/294 (35%), Gaps = 33/294 (11%)

Query: 6   THS--CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA- 62
           TH+     L    +     + GWV   R +    F+ + D   I  +    D    + A 
Sbjct: 2   THTPIVELLSSDSIHQEFTVKGWVRSFRANQ---FVALNDGSTINNLQCVVDFENTDPAL 58

Query: 63  -KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--VFGERE 119
            K +     + I G +               ++E+  +++EI   A+   L   +   + 
Sbjct: 59  LKRITVGAAVAITGTLEESQGGG-------QRVEIKVKEVEIEGDADPEELKKTILSPKR 111

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           +      +   L +R +T    +  R+++  ++        +    TPI+T S  EGA +
Sbjct: 112 HTLEKLREQAHLRVRTNTFGAIMRLRSKLSFAIHEYFNKNGYYHAHTPIITGSDAEGAGE 171

Query: 180 FLVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRD 222
               S ++                 F+          Q +    A G  + +   P FR 
Sbjct: 172 MFRVSALDPENPPRKEDGTIDYSKDFFGKETNLTVSGQLEGETYALGLGKIYTFGPTFRA 231

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           E+  + R   EF+ ++ EM+F + D  ++  E+ ++ V             FL 
Sbjct: 232 ENSNTSRHLAEFWMVEPEMAFCDLDGNMDLAEDFIKYVISYALENCQDDLAFLE 285



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M           D  +++A   D++  G  E+  G  R    +V+ +  +
Sbjct: 372 DYPANIKAFYMR-------LNEDGKTVRAM--DVLFPGIGEMVGGSQREERLDVLKEKMA 422

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            + IS    E          + G   H G   G +R+V+ + G  N+R+V  +P 
Sbjct: 423 ALDIS----EEELSWYLDTRKFGTCTHSGFGLGFERLVLFVTGMTNIRDVIPYPR 473


>gi|21672623|ref|NP_660690.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25009351|sp|Q8K9I7|SYN_BUCAP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|21623256|gb|AAM67901.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 466

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 98/278 (35%), Gaps = 22/278 (7%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V + + + GWV   R    G  F+ + D   +  V    D       K +    +    G
Sbjct: 16  VNTPITIFGWVRSRRSSKSGFSFITVYDGSCLNSVQVVADKTLSNYYKDI----LHLTIG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             ++ +   I +     + E+ A K ++L   +         +++      +   L  R 
Sbjct: 72  CSVTITGILILSIGDKQKYEIKATKFQVLGWIKNPDTYPISAKKHSLEYLREVAHLRSRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ------- 188
           + +   +  R  I  S+   +  + +    TPI+T  + EG  +    S ++        
Sbjct: 132 NLIGVIVRIRHHIFQSLHKFLNKQGYYWIPTPIITGLNTEGTGEMFRVSTMDMRNIPKKI 191

Query: 189 -------GSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E+  + R   EF+ L+
Sbjct: 192 NGSVDFKKDFFGKESFLTVSGQLNLEAYACSLSKVYTFGPTFRAENSNTSRHLAEFWMLE 251

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           +E SF   D+IL   E++L+ + +           FL+
Sbjct: 252 IESSFCNLDEILIFSEDMLKYICKSLLKYCINDIKFLK 289



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 34/198 (17%)

Query: 375 VAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           + K L++       +R++ +D  D             SF      +   E  ++  +   
Sbjct: 300 LKKFLSVN-----FIRINYKDAIDILLNSKKKFDNVVSF--GVDLNAEHERFLVEKHFKA 352

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
              I+++P     +E K        F M          +D  ++ A   DL+  G  E+ 
Sbjct: 353 PVVIINYP-----KELK-------AFYMR-------LNDDKKTVAAM--DLLVPGIGELI 391

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R     V+    S +G+ K      +       + G   H G   G +R++  + G
Sbjct: 392 GGSQREERISVLDLRLSELGLRK----EDYWWYRDLRRYGTVHHSGFGMGFERLISYITG 447

Query: 553 AKNVREVSLFPMSQNFCD 570
             N+R++  FP +    D
Sbjct: 448 ISNIRDIIPFPRTVKNAD 465


>gi|227505952|ref|ZP_03936001.1| lysyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227197474|gb|EEI77522.1| lysyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 533

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 66/343 (19%), Positives = 130/343 (37%), Gaps = 29/343 (8%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            +  +   ++G +  +R  G + F  ++D  G          +  EI +   + W   +D
Sbjct: 82  EETDTEHAIAGRLIFMRNTGKLCFATLQDGDGTQ---VQAMLSLAEIGEEQLAAWKSDVD 138

Query: 75  -GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +S     I +    G++ + A K  + + +       F   +  E  R + R+ DL
Sbjct: 139 LGDFISVRGRVIASR--RGELSIMATKWTMAAKSLRPLPVAFA--DMNEETRVRQRYNDL 194

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             R+   KN + R +++ ++R  +  + F+E  TP+L        AR F+  S       
Sbjct: 195 IVREEARKNAMTRVKVMRALRNYLEDQGFVEIETPMLQTLHGGAAARPFVTHSNALDIDL 254

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y +  +  G DR F+I   FR+E       P EF  L+   ++ + +D   
Sbjct: 255 Y-LRIAPELYLKRAVVGGIDRVFEINRNFRNEGVDRSHSP-EFAMLETYAAWGDYNDCAR 312

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN--------VT 303
           T    ++ V +     + V+     +         G + P++     ++           
Sbjct: 313 TTRESIQAVAQAVFGSHKVT-----LADGTEYDFGGEEWPEIEMYPSLNEALQRKFPGQP 367

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           E  + ++      I           +P  GG G+    + + E
Sbjct: 368 EVTIDTDVETLKGIAD----VIGLDVPKNGGWGHGKLVEEIWE 406



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 5/92 (5%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                ++DL   GFE+A+G        +  + F +        ++           A + 
Sbjct: 437 PGVTEKWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMVLDEDFLAAMEQ 496

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP  G   G+DR++M L G   +RE  LFP
Sbjct: 497 GMPPTAGTGMGMDRLLMALTGLG-IRETVLFP 527


>gi|290992025|ref|XP_002678635.1| asparaginyl-tRNA synthetase [Naegleria gruberi]
 gi|284092248|gb|EFC45891.1| asparaginyl-tRNA synthetase [Naegleria gruberi]
          Length = 588

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 71/339 (20%), Positives = 126/339 (37%), Gaps = 17/339 (5%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++SGW HR+R  G  ++F+ +RD  G  Q V +        A ++  E  + I G 
Sbjct: 155 GKRVQVSGWCHRLRIQGKGLLFITLRDGTGFLQTVLSGVLCQTYEALTLHLESSVTIKGT 214

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V +     +         EL A   +++  + E     FGE     +I    R L LR +
Sbjct: 215 VKADPRAPM-------GFELVADYWKLVGSSPESLP--FGEDVKDPNILLDQRHLILRGE 265

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R+ I+   R    +  + E + P +  +  EG           + ++  L Q
Sbjct: 266 KTSAILKMRSIILQCFREHYYSRGYTEITPPTMVQTQVEGGSTLFKFDYFGEDAY--LTQ 323

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y + ++ +  D  F IA  +R E   + R   EF  ++ E  F+  +D+LNT+E++
Sbjct: 324 SSQLYLETVIPALGDS-FCIAQSYRAEKSDTPRHLSEFTHVEAERPFITFEDLLNTLEDL 382

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +  V E   + +           D  +     D   L+ P       +           K
Sbjct: 383 VCDVTERVLSKSQHLAVVGEETADKLVIT--PDAVKLKRPFKRMTYADCIEFCRNNEVYK 440

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
                  +E            R   +++ E       PG
Sbjct: 441 DEETKELFEFGDDITDAPE--RKMLEKIGEPVLMIKFPG 477



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 43/139 (30%), Gaps = 22/139 (15%)

Query: 437 IMDFP---FYEWNEEEK---KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
           I D P     E   E     K       F M +   E      +         L+    E
Sbjct: 454 ITDAPERKMLEKIGEPVLMIKFPGDMKAFYMKRCEDEPTLTESVDV-------LLPGVGE 506

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           +  G +R    +   +            E  +       + G  PHGG   G++R ++ L
Sbjct: 507 VIGGSMRLESYD---KMMDGYKKEGISAEPYY-WYSDQRKYGTCPHGGYGLGLERYMLWL 562

Query: 551 LGAK-----NVREVSLFPM 564
           L  +      VR+  L+P 
Sbjct: 563 LKNEHNRVRTVRQTCLYPR 581


>gi|255325852|ref|ZP_05366944.1| lysine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297064|gb|EET76389.1| lysine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 525

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 66/341 (19%), Positives = 130/341 (38%), Gaps = 31/341 (9%)

Query: 19  SFVR--LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-G 75
           + V   ++G +  +R  G + F  ++D  G          +  E+ K     W   +D G
Sbjct: 75  TEVTHAIAGRLIFMRNTGKLCFATLQDGDGTQ---VQAMLSLAEVGKERLDAWKSDVDLG 131

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR- 134
             +S     I++    G++ +   +  + + +       F   +  E  R + R+ DL  
Sbjct: 132 DFISVRGRVISSR--RGELSIMVSEWTMAAKSLRPLPVSFA--DMAEDTRVRQRYNDLII 187

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
           R+   KN + R +++ ++R  + +++F+E  TP+L        AR F+  S       Y 
Sbjct: 188 REEARKNAMIRVKVMRALRNYLESQDFVEIETPMLQTLHGGAAARPFITHSNALDIDLY- 246

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y +  +  G DR F+I   FR+E       P EF  L+   ++ + DD     
Sbjct: 247 LRIAPELYLKRAVVGGIDRVFEINRNFRNEGVDRSHSP-EFAMLETYAAWGDYDDCARMT 305

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN--------VTEH 305
              ++ V  +     TV+     +         G + P++     ++           E 
Sbjct: 306 RESIQAVARDVFGSTTVT-----LADGTEFDFGGEEWPEIEMYPSLNEALQRKFPGQPEV 360

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
            + ++      I           +P  GG G+    + + E
Sbjct: 361 TIDTDVETLKGIAD----VIGLDVPKDGGWGHGKLVEEIWE 397



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 ++DL   GFE+A+G        +  + F +        ++           A +
Sbjct: 427 KPGVTEKWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMVLDEDFLAAME 486

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP  G   G+DR++M L G   +RE  LFP
Sbjct: 487 QGMPPTAGTGMGMDRLLMALTGLG-IRETVLFP 518


>gi|71656145|ref|XP_816624.1| lysyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70881765|gb|EAN94773.1| lysyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 659

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 63/338 (18%), Positives = 136/338 (40%), Gaps = 17/338 (5%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
            VR++G V  VR  G IIF+ IR +   +  V    ++   E  K ++    L +  ++ 
Sbjct: 109 TVRVAGRVTSVRDIGKIIFVTIRSNGNELQVVGQVGENFTREDLKKLK--VSLRVGDII- 165

Query: 79  SRSAETINANIITGQIELSAQKIEILS---VAEELPLPVF--GEREYPESIRFKYRFLDL 133
              A+ +   +  G++ ++A ++ ILS     +++  P            ++++YRF D+
Sbjct: 166 --GADGVPCRMQRGELSVAASRMLILSPYVCTDQVVCPNLRGFAVLQDNDVKYRYRFTDM 223

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +      +K R  ++ ++R      NF+E  TP+L T +S   A+ F+     N    
Sbjct: 224 MTNPCVIETIKKRHVMLQALRDYFNERNFVEVETPVLHTVASGANAKSFVTHHNANAMDL 283

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + L  AP+ + +  +  G +R ++I   FR+ED      P EF   +   ++   +D++ 
Sbjct: 284 F-LRVAPELHLKQCIVGGMERIYEIGKVFRNEDADRSHNP-EFTSCEFYAAYHTYEDLMP 341

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT--EHFVHS 309
             E++   +    +    V         +      G     +     +  ++  E    +
Sbjct: 342 MTEDIFLQLAMRVNGTTVVQIYPENAHGNPVTVDLGKPFRRVSVYDEIQRMSGVEFPPPN 401

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
           E      I  ++     + IP           +++ ++
Sbjct: 402 ELNTPKGIAYMSVVMLRYNIPLPPVRTAAKMFEKLIDF 439



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 50/141 (35%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           I     E  ++MD P +                 M     E +         A +++L  
Sbjct: 441 ITDRVVEPTFVMDHPLF-----------------MSPLAKEQVS----RPGLAERFELFV 479

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAG 542
           NG E  +     +        F    + ++  +           ++ Q G+PP  G   G
Sbjct: 480 NGIEYCNAYSELNDPHEQYHRFQQQLVDRQGGDEEAMPLDETFLKSLQVGLPPTAGWGMG 539

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR +MLL  + N+R+  +FP
Sbjct: 540 IDRALMLLTNSSNIRDGIIFP 560


>gi|39940548|ref|XP_359811.1| hypothetical protein MGG_04966 [Magnaporthe oryzae 70-15]
 gi|145010799|gb|EDJ95455.1| hypothetical protein MGG_04966 [Magnaporthe oryzae 70-15]
          Length = 615

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 57/272 (20%), Positives = 110/272 (40%), Gaps = 20/272 (7%)

Query: 12  LGVSDVGS--FVRLSGWVHRVRPHG-GIIFLDI------------RDHYGITQVVANPDS 56
           L   DV     +R++G +   R  G  +IF DI                   Q V     
Sbjct: 116 LKSGDVDKTREIRIAGRIFTKRSSGNKLIFYDIKTGSDTTTTGSKMQIMCQAQYVKEGGP 175

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +  + +    V+ I G     + +        G++ L A ++  LS +    LP   
Sbjct: 176 TFEQQHEHLGRGDVIGIVGFPGRTAPKAKLERGEEGELSLFATEVVQLSPSL-HLLPGER 234

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                   RF+ R+LD    D   + + +R+RI+  +R       FIE  TP++T+ +  
Sbjct: 235 AGFTDGEKRFRMRYLDFMFNDKSREVLWQRSRIVKYIRDFFHDRRFIEVETPMMTSIAGG 294

Query: 176 G-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             A  F+          + +  AP+ Y ++L+  G+++ F+I   FR+E       P EF
Sbjct: 295 ATALPFVTHHNEYDLDMF-MRIAPELYLKMLVVGGYNKVFEIGKNFRNEGCDLTHNP-EF 352

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
             ++   ++ +  D+++  E ++ G+ +  + 
Sbjct: 353 TTIEAYAAYYDMYDVMDYTEELVSGLVKHLTG 384



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 33/93 (35%), Gaps = 4/93 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
               + +++      EI +     +        F      K   ++          R+ +
Sbjct: 494 EKGISERFEGFVCKKEICNAYTELNNPFDQRLRFEEQARQKAQGDDEAQMIDENFLRSLE 553

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+PP  G   GIDR+ M L     +REV  FP
Sbjct: 554 YGLPPTAGWGLGIDRLCMFLTNNATIREVLAFP 586


>gi|296118958|ref|ZP_06837531.1| lysine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295968056|gb|EFG81308.1| lysine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 529

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 66/343 (19%), Positives = 134/343 (39%), Gaps = 27/343 (7%)

Query: 16  DVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           ++G      V ++G +  +R  G + F  ++D  G          +  E+ +   + W  
Sbjct: 73  EIGQETQDVVSIAGRLIFMRNTGKLCFATLQDGDGTQ---VQAMLSLAEVGEDALAAWKA 129

Query: 72  CID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            +D G  +S +   I++    G++ + A + ++ + +       F   +  E  R + R+
Sbjct: 130 DVDLGDFISVTGRVISSR--RGELSVMASEWQMAAKSLRPMPVAFA--DMAEDTRVRQRY 185

Query: 131 LDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
            DL  R+   KN + R ++I ++R  +  E F E  TP+L        AR F+  S    
Sbjct: 186 NDLILREEARKNAMTRIQVIRALRHHLEDEGFNEIETPMLQTLHGGAAARPFVTHSNALD 245

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              + L  AP+ + +  +  G D+ F+I   FR+E       P EF  L++  ++ + + 
Sbjct: 246 IDLF-LRIAPELFLKRAVVGGIDKVFEINRNFRNEGIDKSHSP-EFAMLEIYDAWSDYNG 303

Query: 249 ILNTMENVLRGVFEEFSNGN-----TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           I  T++  ++ V +     +       +   L       I  Y +    L+         
Sbjct: 304 IAKTIKESIQAVAQAVFGSHVVTLADGTEYDLGGDTWPEIEMYPSLNEALQKKFPGQ--K 361

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           E  + S      ++           +P  GG G+    + + E
Sbjct: 362 EVTIDSTVEELKELAD----VVGLEVPKGGGWGHGKLVEEIWE 400



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 9/128 (7%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           +     ++ E  I   H P           + +        ++DL   GFE+A+G     
Sbjct: 399 WELLCEDQLEGPIFVKHFP----VETSPLTRDHRSEPGVTEKWDLYVRGFELATGYSELV 454

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
              +  + F +        ++           A + GMPP GG   GIDR++M L G   
Sbjct: 455 DPVIQRERFEDQARLAADGDDEAMVLDEEFLSAMEQGMPPTGGAGMGIDRLLMALTGLG- 513

Query: 556 VREVSLFP 563
           +RE  LFP
Sbjct: 514 IRETVLFP 521


>gi|156083889|ref|XP_001609428.1| lysyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796679|gb|EDO05860.1| lysyl-tRNA synthetase [Babesia bovis]
          Length = 548

 Score =  161 bits (408), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/346 (18%), Positives = 128/346 (36%), Gaps = 34/346 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRV-RPHGGIIFLDIRDHYGITQVVANPDSAC- 58
           +++Y   + G          VR++G + R+      + F D+R +    QV  N +    
Sbjct: 44  INKYDHLTAGQ---YVENEEVRIAGRITRMASSSSKLRFYDVRSNGVRLQVFVNYEYHNA 100

Query: 59  -----FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
                 EI  S++   V+ I G                G++ +  +++ +L+    +   
Sbjct: 101 SSGDFMEIHNSLKRGDVVGIVG---------FPGRSKRGELSIFLREVRLLTPCLHMLPD 151

Query: 114 VFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TA 171
             G ++     RF+ R+LD+  +      +  R+RI++  R       F+E  TP L   
Sbjct: 152 KSGLKD--PDTRFRQRYLDMIMNEDAMNVMFTRSRIVSYTRNFFSQRGFMEVETPTLNVQ 209

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                AR F+          + L  AP+   ++++  GF++ F+I  CFR+E       P
Sbjct: 210 CGGASARPFISHHNDLDIDLF-LRVAPELPLKMIVVGGFEKVFEIGKCFRNEGIDMTHNP 268

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF   +   ++ + +D++   E  L  +  E   G T+                G +  
Sbjct: 269 -EFTSCEFYWAYADYNDLIQLTEEYLSSLVLELHGGYTLPY--------HPDGPEGPEII 319

Query: 292 -DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
            D + P    ++ +         F    + +   E +    K  G 
Sbjct: 320 LDFKPPYDRISLIDALKQGTGIDFVPPYNSDENCEKYREAIKAAGL 365



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 11/126 (8%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK- 515
           +P  M           DL      +++L   G E+ +     +      +       +K 
Sbjct: 399 HPQCMCPLSKWHRSKEDL----CERFELFVCGRELINAYTELNDPFKQRECLQEQSKAKS 454

Query: 516 ---EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
              +  ++   G   A + G+PP  G   G+DR+ M +    N++EV  FP  +    L 
Sbjct: 455 MGDDEAQDVDEGYCVALEYGLPPTAGWGVGLDRLTMFMSDRNNIKEVLFFPTMKP---LP 511

Query: 573 MGSPST 578
             +PS+
Sbjct: 512 TNTPSS 517


>gi|71006800|ref|XP_758056.1| hypothetical protein UM01909.1 [Ustilago maydis 521]
 gi|46097557|gb|EAK82790.1| hypothetical protein UM01909.1 [Ustilago maydis 521]
          Length = 1135

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 64/322 (19%), Positives = 117/322 (36%), Gaps = 51/322 (15%)

Query: 15  SDVGSFVRLSGWVHRVRP-HGGIIFLDIRDH-YGITQVVANPDS----ACFEIAKSVRSE 68
           + +G  V L   +H +R     ++F+ +R     I  V+A  +          AK +  E
Sbjct: 298 AQIGDTVTLRARIHTIRDVSSHLVFIVLRQQISTIQAVLAEENDNVTGHMVRWAKRLPLE 357

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIE------------------ILSVAEEL 110
            ++ + G +             T Q E+  Q++                   +L  +++ 
Sbjct: 358 SIVLVRGKLQKPREPITGTT--TQQAEIKVQQLYLVTSPKEPLPFNVYDADLVLKKSDDD 415

Query: 111 PL--------------PVFGEREYPES---------IRFKYRFLDLRRDTLHKNIVKRTR 147
                           P   E    E          +R   R +DLR  T          
Sbjct: 416 HSGSASGHGTDSDGEGPPRDENHSIERHEGPVITQRVRLTNRIIDLRTPTAQAIFRINAA 475

Query: 148 IINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           I N+ R  +   +F+E  TP L   + E      +     + +F A  Q+PQ +KQ+ +A
Sbjct: 476 ICNNFRSHLDKNHFLEIHTPKLQGGASESGSSVFMLDYFGRPAFLA--QSPQLFKQMCIA 533

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
           + F R ++I P FR E+  + R   E+  LD+EM  V   D +  ++ +L+ +F    + 
Sbjct: 534 ADFKRVYEIGPVFRAENSNTARHLTEYTGLDIEMEIVHYYDAIRVIDGMLKSIFVALRDN 593

Query: 268 NTVSNNFLRICYDDAIRRYGTD 289
                  ++  +      Y  D
Sbjct: 594 FKPERELIKRHFPHEDLVYPED 615



 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 48/208 (23%), Positives = 81/208 (38%), Gaps = 39/208 (18%)

Query: 415 DARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           D        LG +I        +I+D           K   +  PF   +   +S   N 
Sbjct: 646 DLHTRAEIRLGELIKEKYNTDYYILD-----------KFPSSVRPFYAMEDKEDSKVTN- 693

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                   +D+   G EI +GG R H  E + +    + IS + ++         F+ G 
Sbjct: 694 -------SFDIFIRGQEICTGGQRIHDIEELERKMHRLSISSKGMQE----YLEGFRLGA 742

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLF-------PMSQNFCDLLMGSPSTVSVEQLRE 586
           PPH G   G++R+VML L   +VR  +LF       P+ +N  D L    ++ +    + 
Sbjct: 743 PPHAGCGIGLERLVMLYLNLGDVRYGTLFHRDPRSLPLQKNDVDELRHPEASTNPPPWK- 801

Query: 587 LGLRIVENPKKILKISVTTILRNVYGLK 614
                  +P+  LK    + LR++  L+
Sbjct: 802 -------HPRLALKADAESELRDLQPLE 822


>gi|42408999|dbj|BAD10253.1| putative Aspartyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|125580758|gb|EAZ21689.1| hypothetical protein OsJ_05322 [Oryza sativa Japonica Group]
          Length = 508

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 72/330 (21%), Positives = 118/330 (35%), Gaps = 32/330 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP--------DSACF 59
              LG    G  VR+ G  H VR  G  + FL +R      Q V           D+   
Sbjct: 45  VAALGPDVAGRAVRVRGAAHAVRAVGRRVAFLVLRQGSSTVQCVVGGGGGGGGGGDAGVA 104

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-- 117
             A  +  E V+ + G+V               ++E+  +K+  +S A         +  
Sbjct: 105 RFAAGLSRESVVDVAGVVSLPREPVRGTT--QQEVEIQVKKLYCISKATPNLPISVDDAA 162

Query: 118 ----------------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENF 161
                               +  R  +R +DLR          +  I N  R  +++E F
Sbjct: 163 RSEEDVVKAKAAGEQLVHVGQDKRLDFRVIDLRTPANQAIFRVQCEIENIFRQVLLSEGF 222

Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           +   TP L   S EG            G    L Q+PQ +KQ+ +  GF+R F++ P FR
Sbjct: 223 VGIHTPKLIGGSSEGGAAVFKLDYN--GQPACLAQSPQLHKQMAICGGFERVFEVGPVFR 280

Query: 222 DEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
            ED  + R   EF  LDMEM+      ++ + ++ +   +F+  +         +   Y 
Sbjct: 281 AEDSNTHRHLCEFVGLDMEMAIKGHYSEVCDVVDRLFVAMFDHLNKNCAKELEAINRQYP 340

Query: 281 DAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
               +Y      +     +  + E  VH E
Sbjct: 341 FKPLKYLPKTLRIEYDEGIRMLKEAGVHVE 370



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 61/162 (37%), Gaps = 22/162 (13%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
                D      ++LG +    ++     DF          +   A  PF          
Sbjct: 369 VEAMGDLNTESEKKLGELVHTKYD----TDFYML------CRYPSAVRPFYTMPCSD--- 415

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              D     +  +D+   G EI SG  R H+ EV+ +     GI    +         AF
Sbjct: 416 ---DPR--YSNSFDVFVRGEEIISGAQRVHVPEVLARQAEERGIDVGSI----AAYVDAF 466

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G PPHGG   G++R+VML  G  N+R+ SLFP      + 
Sbjct: 467 RYGAPPHGGFGVGLERVVMLFCGLGNIRKASLFPRDPRRLNP 508


>gi|227834055|ref|YP_002835762.1| lysyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262183459|ref|ZP_06042880.1| lysyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|227455071|gb|ACP33824.1| lysyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 524

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/339 (19%), Positives = 130/339 (38%), Gaps = 21/339 (6%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            +    V ++G +  +R  G + F  ++D  G          +  E+ +   + W   +D
Sbjct: 73  EETDVEVAIAGRLIFMRNTGKLCFATLQDGDGTQ---VQAMLSLAEVGEERLAAWKSDVD 129

Query: 75  -GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +S     I +    G++ + A +  + + +       F   +  E  R + R+ DL
Sbjct: 130 LGDFISVRGRVIASR--RGELSVMASEWTMAAKSLRPLPVSFA--DMNEETRVRQRYNDL 185

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             R+   KN + R +++ ++R  +  + F+E  TP+L        AR F+  S       
Sbjct: 186 IVREEARKNAMTRVKVMRALRNYLEDQGFMEIETPMLQTLHGGAAARPFVTHSNALDIDL 245

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ + +  +  G DR F+I   FR+E       P EF  L+   ++ + +D   
Sbjct: 246 Y-LRIAPELFLKRAVVGGIDRVFEINRNFRNEGVDRSHSP-EFAMLETYEAWGDYNDCAR 303

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
           T+   ++ V        TV+     +         G + P++     ++   +     + 
Sbjct: 304 TIRESIQSVARAVFGSTTVT-----LADGTEYDFGGEEWPEIEMYPSLNEALQRKFPGQP 358

Query: 312 RVFS----KILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
            V      + L          +P  GG G+    + + E
Sbjct: 359 EVTIDSTVEELKALADVIGLDVPKNGGWGHGKLVEEIWE 397



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 5/92 (5%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                ++DL   GFE+A+G        +  + F +        +            A + 
Sbjct: 428 PGVTEKWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDEEAMVLDEDFLAAMEQ 487

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMPP  G   G+DR++M L G   +RE  LFP
Sbjct: 488 GMPPTAGAGMGMDRLLMALTGLG-IRETVLFP 518


>gi|168020322|ref|XP_001762692.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686100|gb|EDQ72491.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 493

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 63/364 (17%), Positives = 120/364 (32%), Gaps = 67/364 (18%)

Query: 17  VGSFVRLSGWVHRVRPHGGII--FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +G  V + GWV   R  G     FL++ D   I  +    D+      +   +   + + 
Sbjct: 27  IGQKVTVGGWVKTGRVMGKTASAFLEVNDGSWIGNLQVLVDATVATERQLTLTGTSVLVQ 86

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++    +         ++EL  + I  +        P+   +   ES+R     L  R
Sbjct: 87  GKLVEPPED------KKQKVELLVETILHVGTVNAAKYPISKTKLSLESLR-SQLHLRAR 139

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
            +T+      R  +  +         F+   TPI+T S  EGA +    + +        
Sbjct: 140 TNTISAVARIRHALAVATHTFFDRNGFMWVHTPIITTSDCEGAGEMFQVTTLFSETERRD 199

Query: 190 -------------------SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
                               F+A         Q +  + A      +   P FR E+  +
Sbjct: 200 RDLKPGMPRKEGGEVDFGADFFARQAFLTVSGQMQVEMYACALSNVYTFGPTFRAENSHT 259

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN------------------- 268
            R   EF+ ++ E++F +  D +N  E+ +R + +   +                     
Sbjct: 260 TRHLAEFWMIEPEIAFADLQDDMNCAEDYVRFMCQWLLDHCLEDMKFISSMYDKTAVDRL 319

Query: 269 --TVSNNFLRICYDDAIRRY--------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK 316
               S  F+RI Y +AI           G  +    N +   +   +EH  +    ++ K
Sbjct: 320 KLVASTPFVRITYTEAIEILEKARTSKCGVTEKKFENKVEWGIDLASEHERYLTEEIYKK 379

Query: 317 ILSV 320
            + V
Sbjct: 380 PVIV 383



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+ +    + +  E  E          + 
Sbjct: 398 NDDEKTVAAMDVLVPKVGELVGGSQREERQDVLERRLKEMNLPMEPYE----WYIDLRRH 453

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   H G   G +R+++   G +N+R+V  FP      +L
Sbjct: 454 GTVKHAGFGLGFERMILFATGLENIRDVIPFPRYPGKAEL 493


>gi|145502188|ref|XP_001437073.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124404220|emb|CAK69676.1| unnamed protein product [Paramecium tetraurelia]
          Length = 579

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 74/361 (20%), Positives = 134/361 (37%), Gaps = 41/361 (11%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            GD+  + V   + +   +H  R  G + FL +R++Y   QVVA      F  A+ ++  
Sbjct: 109 VGDVDQTLVNQVILVRARIHNSRVKGKLAFLVLRENYNTIQVVAEKGE--FASAQMLKYI 166

Query: 69  WVLCIDGLVMSRSAETINANII---TGQIELSAQKIEILSVAEELPLPVFGE-------- 117
             + ++ +V   +        I   T ++EL  + I+++S +  +      +        
Sbjct: 167 SGIPVESVVDIEALVKQPFKEILSCTQKVELEVRSIQVVSRSLPMLPFQIEDASRRITDF 226

Query: 118 ---------------REYPES--------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRC 154
                          ++  E          R   R +DLR          ++ I    R 
Sbjct: 227 EDGVQEQKQEEPQQKQDKNEKQQIQVMLKTRLDNRVIDLRTPAKQAIFRVQSGIGLLFRE 286

Query: 155 RMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
            ++   FIE  TP L   + EG  +       NQ +   L Q+PQ YKQ+ + + +DR F
Sbjct: 287 FLVENGFIEIHTPKLIGGTSEGGTNVFKLKYFNQDA--CLAQSPQLYKQMCLMADYDRVF 344

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNN 273
           ++AP FR E+  + R   EF  +D+EM   E   ++L+ M ++   +F+           
Sbjct: 345 EVAPVFRAENSNTHRHQCEFISMDIEMVIKEHFTELLDLMGDLCIYMFKGIEKRYQKEIE 404

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
              I        +   +P L+          H           + +VN       +  K 
Sbjct: 405 I--ISQQFPFEPFKIPEPVLKLTFEEGVKMLHEAGVNQDPHDDLDTVNEKILGKLVREKY 462

Query: 334 G 334
           G
Sbjct: 463 G 463



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 14/117 (11%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           +      PF TMP     +             YD    G EI SG  R H  E++++   
Sbjct: 471 RYPKKARPFYTMPCHDDPNY---------TLSYDFFMRGEEIVSGAQRVHDPELLVKQIK 521

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             GI+ E +++       +F+ G  PHGG A G++R+  L    KN+    +FP   
Sbjct: 522 EKGIAVEPLKD----YIDSFRYGAYPHGGCAFGLERVAFLYFNLKNISNACMFPRDP 574


>gi|289753728|ref|ZP_06513106.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289694315|gb|EFD61744.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
          Length = 1172

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+ +        A   
Sbjct: 711 SHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAADF 770

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  +     +   TG   L      ++      PLP   +       R
Sbjct: 771 NAATDL---GDLVEMTGHMGASK--TGTPSLIVSGWRLIGKCLR-PLPNKWKGLLDPEAR 824

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR F+  
Sbjct: 825 VRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTH 884

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 885 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 942

Query: 244 VEQDDILNTMENVL 257
            +  + ++    ++
Sbjct: 943 ADYLEWVDGCRELI 956



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 32/192 (16%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNCFEFC 435
            +   +EA+  R+D   G +      D    P +    A      + + L  + C   +  
Sbjct: 1000 HDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLELYEHL--VECRTEQPT 1057

Query: 436  WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            + +DFP             + +P T P                A ++DLV  G E+ +  
Sbjct: 1058 FYIDFP------------TSVSPLTRPHRS---------KRGVAERWDLVAWGIELGTAY 1096

Query: 496  IRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                      +      +                 +A +  MPP GG+  GIDR+VML+ 
Sbjct: 1097 SELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLIT 1156

Query: 552  GAKNVREVSLFP 563
            G  ++RE   FP
Sbjct: 1157 GR-SIRETLPFP 1167


>gi|289443094|ref|ZP_06432838.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis T46]
 gi|289569687|ref|ZP_06449914.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis T17]
 gi|289416013|gb|EFD13253.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis T46]
 gi|289543441|gb|EFD47089.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis T17]
          Length = 1172

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+ +        A   
Sbjct: 711 SHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAADF 770

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  +     +   TG   L      ++      PLP   +       R
Sbjct: 771 NAATDL---GDLVEMTGHMGASK--TGTPSLIVSGWRLIGKCLR-PLPNKWKGLLDPEAR 824

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR F+  
Sbjct: 825 VRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTH 884

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 885 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 942

Query: 244 VEQDDILNTMENVL 257
            +  + ++    ++
Sbjct: 943 ADYLEWVDGCRELI 956



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 32/192 (16%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNCFEFC 435
            +   +EA+  R+D   G +      D    P +    A      + + L  + C   +  
Sbjct: 1000 HDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLELYEHL--VECRTEQPT 1057

Query: 436  WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            + +DFP             + +P T P                A ++DLV  G E+ +  
Sbjct: 1058 FYIDFP------------TSVSPLTRPHRS---------KRGVAERWDLVAWGIELGTAY 1096

Query: 496  IRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                      +      +                 +A +  MPP GG+  GIDR+VML+ 
Sbjct: 1097 SELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLIT 1156

Query: 552  GAKNVREVSLFP 563
            G  ++RE   FP
Sbjct: 1157 GR-SIRETLPFP 1167


>gi|219557559|ref|ZP_03536635.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|260200703|ref|ZP_05768194.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T46]
          Length = 1111

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+ +        A   
Sbjct: 650 SHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAADF 709

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  +     +   TG   L      ++      PLP   +       R
Sbjct: 710 NAATDL---GDLVEMTGHMGASK--TGTPSLIVSGWRLIGKCLR-PLPNKWKGLLDPEAR 763

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR F+  
Sbjct: 764 VRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTH 823

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 824 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 881

Query: 244 VEQDDILNTMENVL 257
            +  + ++    ++
Sbjct: 882 ADYLEWVDGCRELI 895



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 32/192 (16%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNCFEFC 435
            +   +EA+  R+D   G +      D    P +    A      + + L  + C   +  
Sbjct: 939  HDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLELYEHL--VECRTEQPT 996

Query: 436  WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            + +DFP             + +P T P                A ++DLV  G E+ +  
Sbjct: 997  FYIDFP------------TSVSPLTRPHRS---------KRGVAERWDLVAWGIELGTAY 1035

Query: 496  IRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                      +      +                 +A +  MPP GG+  GIDR+VML+ 
Sbjct: 1036 SELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLIT 1095

Query: 552  GAKNVREVSLFP 563
            G  ++RE   FP
Sbjct: 1096 GR-SIRETLPFP 1106


>gi|215430532|ref|ZP_03428451.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
          Length = 1111

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+ +        A   
Sbjct: 650 SHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAADF 709

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  +     +   TG   L      ++      PLP   +       R
Sbjct: 710 NAATDL---GDLVEMTGHMGASK--TGTPSLIVSGWRLIGKCLR-PLPNKWKGLLDPEAR 763

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR F+  
Sbjct: 764 VRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTH 823

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 824 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 881

Query: 244 VEQDDILNTMENVL 257
            +  + ++    ++
Sbjct: 882 ADYLEWVDGCRELI 895



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 32/192 (16%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNCFEFC 435
            +   +EA+  R+D   G +      D    P +    A      + + L  + C   +  
Sbjct: 939  HDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLELYEHL--VECRTEQPT 996

Query: 436  WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            + +DFP             + +P T P                A ++DLV  G E+ +  
Sbjct: 997  FYIDFP------------TSVSPLTRPHRS---------KRGVAERWDLVAWGIELGTAY 1035

Query: 496  IRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                      +      +                 +A +  MPP GG+  GIDR+VML+ 
Sbjct: 1036 SELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLIT 1095

Query: 552  GAKNVREVSLFP 563
            G  ++RE   FP
Sbjct: 1096 GR-SIRETLPFP 1106


>gi|306779639|ref|ZP_07417976.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu002]
 gi|308327440|gb|EFP16291.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu002]
          Length = 727

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+ +        A   
Sbjct: 266 SHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAADF 325

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  +     +   TG   L      ++      PLP   +       R
Sbjct: 326 NAATDL---GDLVEMTGHMGASK--TGTPSLIVSGWRLIGKCLR-PLPNKWKGLLDPEAR 379

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR F+  
Sbjct: 380 VRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTH 439

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 440 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 497

Query: 244 VEQDDILNTMENVL 257
            +  + ++    ++
Sbjct: 498 ADYLEWIDGCRELI 511



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 32/192 (16%)

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNCFEFC 435
           +   +EA+  R+D   G +      D    P +    A      + + L  + C   +  
Sbjct: 555 HDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLELYEHL--VECRTEQPT 612

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
           + +DFP             + +P T P                A ++DLV  G E+ +  
Sbjct: 613 FYIDFP------------TSVSPLTRPHRS---------KRGVAERWDLVAWGIELGTAY 651

Query: 496 IRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                     +      +                 +A +  MPP GG+  GIDR+VML+ 
Sbjct: 652 SELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLIT 711

Query: 552 GAKNVREVSLFP 563
           G  ++RE   FP
Sbjct: 712 GR-SIRETLPFP 722


>gi|320593613|gb|EFX06022.1| lysyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 622

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/333 (19%), Positives = 126/333 (37%), Gaps = 33/333 (9%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIR---DHYGI--------TQVVANPDSA 57
           G++  +     +R++G +   R  G  +IF DIR   D   I                  
Sbjct: 120 GEVDKT---REIRVAGRIFTTRRSGVKLIFYDIRTGADTKSIGTRLQVMCQSQNVKEGGV 176

Query: 58  CFEIAK-SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
            F+     +    V+ I G     + ++       G++ + A +I +LS +    LP   
Sbjct: 177 PFDKQHVHLARGDVVGIVGWPGRTAPKSRLEKGEQGELSIMASEIVLLSPSL-HILPSEY 235

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                   RF+ R+LDL   D   + + KR+R+I  +R       FIE  TP L A +  
Sbjct: 236 YGFKDHEQRFRSRYLDLLFNDASRETLWKRSRMIKYIRDFFSTREFIEVETPTLAAIAGG 295

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                 +    +      L  AP+ Y ++L+  GF++ F++   FR+E       P E+ 
Sbjct: 296 ATALPFITHHNSLNRDLYLRIAPELYLKMLIVGGFNKVFELGKNFRNEGIDLTHSP-EYT 354

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            ++   ++ +  D++   E ++ G+ ++ +     S           +     + P  R 
Sbjct: 355 SIEFYAAYYDVYDVMAMTEELVSGLVKDLTGSYKTSFT----TQHGEVYEVNWEAPWRRI 410

Query: 296 PI--IMHNVT--------EHFVHSEFRVFSKIL 318
            +   +  +T        E       + F ++L
Sbjct: 411 DMIPELEKITGKTFPPGDELHTDETNKFFRELL 443



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 4/94 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++      EIA+     +        F      K   ++          RA +
Sbjct: 495 RKGLCERFEAFVCKKEIANAYTELNNPFDQRMRFEEQARQKAQGDDEAQLVDENFLRALE 554

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            G+PP GG   GIDR+ M L     +REV  FPM
Sbjct: 555 HGLPPTGGWGLGIDRLAMFLTNNYAIREVISFPM 588


>gi|189203561|ref|XP_001938116.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187985215|gb|EDU50703.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 1041

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 135/385 (35%), Gaps = 36/385 (9%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH----YGITQVVANPDS 56
           H  R H   D    D+G  V     +H +R      +FL  R       G+    A+   
Sbjct: 207 HESR-HKIQDFSAKDIGKEVVFRARIHHLRKMSSKFVFLMFRQQLATIQGVLVEHADISK 265

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT-GQIELSAQKIEILS---------- 105
                A+ + +E V+ + G++    A+       T   +E+S   + + +          
Sbjct: 266 YMLYWAEHLDAETVVLVKGILQEPKAKQGEVLGATIHDVEVSVHALHVEASVTDHLPFNV 325

Query: 106 -------------VAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSM 152
                        +A+E         +  +  R   R +DLR          ++ I    
Sbjct: 326 NEAEVTQAEVDAELAKEDHKEGHTRVKIADRTRLNNRVIDLRTTASQGIFRIQSGICRLF 385

Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
           R ++ +E FIE  TP L   + E            +G+F A  Q+PQ  KQ+ +++ F +
Sbjct: 386 RNQLDSEGFIEIHTPKLQGGATESGASVFKIDYFGRGAFLA--QSPQLAKQMAISADFGK 443

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVS 271
            ++I   FR E+  + R   E+  LD+EM   E   ++L  ++   + +F+         
Sbjct: 444 VYEIGAVFRAENSNTYRHLTEYTGLDLEMQIDEHYHEVLRVLDRTFKAIFKGIYEQYRPE 503

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE---HFVHSEFRVFSKILSVNPGYEVWA 328
              ++  +      +  + P +     +  + E             ++ L      ++  
Sbjct: 504 IEVIKKHFPHEDLVWLDETPIIPFADAVRMLNESGWRDDDGNELDVNEDLGTRDEVQLGR 563

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQ 353
           +  +  G +    D+    AR    
Sbjct: 564 VIKQKLGTDYYILDKFPANARPFYA 588



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 20/164 (12%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF            N+     +  +D+ C G EI SGG R H ++++L+    
Sbjct: 578 KFPANARPFYAMND------PNNPNVTNS--FDIFCRGQEILSGGQRIHDADMLLEKMRK 629

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           + +    +E       + FQ G PPHGG   G++RI+ML++   N+R  S+FP       
Sbjct: 630 LKVDPSSMEE----YIQGFQWGAPPHGGGGIGLERILMLMMSLGNIRHASMFPRDPKSL- 684

Query: 571 LLMGSPSTVSVEQLRELGLRIVENPKKILKISVTTILRNVYGLK 614
                P    ++QLR      +  P +    +V  I  ++  ++
Sbjct: 685 -----PEKAVIKQLRHPEASTMHPPWEGQDRAVAKI--DLQPIE 721


>gi|145596786|ref|YP_001161083.1| lysyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145306123|gb|ABP56705.1| lysyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 502

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 61/283 (21%), Positives = 112/283 (39%), Gaps = 20/283 (7%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD 55
           RT +  ++          +  G  V ++G V  +R  G + F  +RD  G   Q + + D
Sbjct: 43  RTRTIAEIRQGYADLPTDTATGDQVSVTGRVIFMRNTGKLCFATLRDGDGTELQAMLSLD 102

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                 A+ +     L   G ++  + E I +    G++ + AQ   + + A        
Sbjct: 103 RVG---AQRLEDWKRLVDLGDLVGVTGEVITSR--RGELSVLAQGWAVTAKALRPLP--V 155

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSP 174
             +   E  R + R++DL      + +V+ R   + S+R  +    F+E  TP+L     
Sbjct: 156 AHKPLSEEARVRQRYVDLIVRPQARQMVRTRATAVRSLRESLHERGFLEVETPMLQLLHG 215

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  G D  F+I   FR+E   S   P E
Sbjct: 216 GATARPFVTHSNALSTDLY-LRIAPELFLKRALVGGVDHVFEINRNFRNEGVDSSHSP-E 273

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           F  L+   ++ + D I     ++++           V++   R
Sbjct: 274 FAMLEAYQAYGDYDTIGELTRHLIQQAALAVGGSTVVTHADGR 316



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 56/151 (37%), Gaps = 28/151 (18%)

Query: 419 HIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +A+EL   ++        ++ D+P     EE   +  AH                    
Sbjct: 369 KLAEELFEELVVPGLLAPTFVRDYP-----EETSPLVRAHR----------------TEP 407

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               ++DL   GFE+ +G        V  +            ++          RA + G
Sbjct: 408 GLTEKWDLYVLGFELGTGYSELVDPVVQRERLVAQARLAARGDDEAMRLDEDFLRALEYG 467

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP GG+  GIDR++M L G   +RE  LFP
Sbjct: 468 MPPSGGMGMGIDRLLMALTGLG-IRETILFP 497


>gi|29840596|ref|NP_829702.1| lysyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301684|sp|Q821U6|SYK_CHLCV RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|29834946|gb|AAP05580.1| lysyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 525

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 65/307 (21%), Positives = 123/307 (40%), Gaps = 24/307 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SACFEIAKSVRSEWVLCIDG 75
            V++SG +   R  G   F  I D+    QV+ N D    +   E A+    +++     
Sbjct: 65  KVKISGRMVLFRSMGKNAFAQILDNDQKIQVMFNRDFSSVAGLPEDAEISPIKFIEKKLD 124

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           L      E       +G++ +  + + +L  A  + LP        + IR++ R+LDL  
Sbjct: 125 LGDILGIEGYLFFTHSGELTILVETVTLLCKAL-ISLPDKHAGLSDKEIRYRKRWLDLIS 183

Query: 136 -DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYA 193
            D + +   KR+RII  +R  M A+ F+E  TPIL        A  F+          + 
Sbjct: 184 SDEVRQTFFKRSRIIKLIRQYMDAQGFMEVETPILQNIYGGAEATPFVTTLNALHSEVF- 242

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  + +   + ++  G  R ++I   FR+E       P EF  ++   + V+   ++  +
Sbjct: 243 LRISLEIALKKILVGGTSRVYEIGKVFRNEGIDRTHNP-EFTMIEAYAANVDYHSVMTYV 301

Query: 254 ENVLRGVFEEFSN---------------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           EN++  +    ++                      ++R+   D+I+ YG    DL     
Sbjct: 302 ENLVEYLVCALNDGSTVLTYSHLKQGPQTVDFKAPWIRMTMKDSIKTYGDVDVDLHADHE 361

Query: 299 MHNVTEH 305
           + N+ + 
Sbjct: 362 LRNILKE 368



 Score = 80.5 bits (197), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 10/125 (8%)

Query: 451 KIDFAHNPFTMPQGGME---SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM--- 504
           K+   H+    P        SL+  D   +   +++  C G E+ +     +        
Sbjct: 397 KLIAPHHITDHPIETTPLCKSLRSGDADFV--ERFESFCLGKELCNAYSELNDPLHQRML 454

Query: 505 --LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              Q                     A   GMPP GG   GIDR+VM+L  A ++R+V  F
Sbjct: 455 LEKQMEKKALDPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMILTDAASIRDVLYF 514

Query: 563 PMSQN 567
           P  + 
Sbjct: 515 PAMRR 519


>gi|325261859|ref|ZP_08128597.1| aspartate--tRNA ligase [Clostridium sp. D5]
 gi|324033313|gb|EGB94590.1| aspartate--tRNA ligase [Clostridium sp. D5]
          Length = 443

 Score =  161 bits (407), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 14/289 (4%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L     G+ VR++G VH +R  G + F+ +R   G+ Q V     + F + K ++    +
Sbjct: 19  LREGMTGNRVRVNGAVHAIRDMGTVAFVILRKREGLIQCVFEEGVSKFSL-KELKEADTV 77

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPV-FGEREYPESIRFKYR 129
            + G+          +      IE+  ++I++LS  AE LPLPV           +  YR
Sbjct: 78  EVTGIPAE-------SEKAPHGIEIRIEEIKVLSEPAEPLPLPVSKWRLNTSLEAKMNYR 130

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            + LR          +  I+   R  +  E F E  TP L A S EG  +       ++ 
Sbjct: 131 PISLRNIRERAKFRIQEGIVRGFRDFLYEEGFTEIHTPKLGAKSAEGGANLFRLEYFHRP 190

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDD 248
           +   L Q+PQ YKQ +M   FDR F+ AP FR E   + R   E+  LD EM +++  +D
Sbjct: 191 AI--LQQSPQFYKQ-MMVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFED 247

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           I+      L+   +            L I    A +       D++  +
Sbjct: 248 IMAMEAGFLQYTMKLLEREYAGELRILGIELPKAEKIPAVRFDDIKRKV 296



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF            +         +DL+  G EI 
Sbjct: 329 DFVFVTHYP------------SRKRPFYAM--------DDPEDPTFTLSFDLLFRGMEIT 368

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H    + +     G+++E +E        AF+ GMPPHGG+  G++R+ M +LG
Sbjct: 369 TGGQRIHDYHELKKKMEIRGMTEEGMEQ----YLSAFKHGMPPHGGLGIGLERLTMKILG 424

Query: 553 AKNVREVSLFPMSQNFCDL 571
             NVRE +LFP   +  + 
Sbjct: 425 EDNVREAALFPRDLSRLEP 443


>gi|320334289|ref|YP_004171000.1| aspartyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755578|gb|ADV67335.1| aspartyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 432

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 68/253 (26%), Positives = 114/253 (45%), Gaps = 22/253 (8%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPDSACFEIAKSVRSEWVLCID 74
             G  VRL G+VH  R  GG+ FL +RD  GI   V  N      E          + + 
Sbjct: 21  HDGQTVRLQGFVHARRDLGGVQFLVLRDVTGIAQCVGQNLTLPMPE--------SSVEVI 72

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YPESIRFKYRFLD 132
           G V + +          G  E+ AQ++ +LS A + P     + E          YR++ 
Sbjct: 73  GTVKAHAK-------APGGYEIQAQQVHVLSEAVQAPPVEIPKMEWNVNPETTLDYRYVT 125

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R       +  +  I+ + R  +I E F E  +P + ++  EG  +        Q ++ 
Sbjct: 126 VRGLKERATLKVQAEIVAAFREHLIDEGFTEIYSPKIVSAGAEGGANLFELDYFGQRAYL 185

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILN 251
           A  Q+PQ YKQ +M   F+R F++AP FR E+  + R   E+  LD+E+ F+E ++D+++
Sbjct: 186 A--QSPQLYKQ-IMVGTFERVFEVAPVFRAEEHATSRHLNEYLSLDVELGFIESEEDVMD 242

Query: 252 TMENVLRGVFEEF 264
               +L  +    
Sbjct: 243 VETRLLSAIMTRL 255



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 55/136 (40%), Gaps = 27/136 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P             A  PF     G                +DL+  G EI 
Sbjct: 321 DFVFVTKYP------------KAARPFYAYPEGD-----------LTRGFDLLFRGIEIT 357

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SGG R H   ++LQ+     I    +E    G    F+ GMPPHGG A G +R+   LLG
Sbjct: 358 SGGQRIHEHAMLLQSLREYRIDPAQME----GYTEVFKHGMPPHGGFAIGAERLTAKLLG 413

Query: 553 AKNVREVSLFPMSQNF 568
             NVR    FP  ++ 
Sbjct: 414 IANVRYARAFPRDRHR 429


>gi|224091371|ref|XP_002309236.1| predicted protein [Populus trichocarpa]
 gi|222855212|gb|EEE92759.1| predicted protein [Populus trichocarpa]
          Length = 469

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 67/391 (17%), Positives = 121/391 (30%), Gaps = 50/391 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G    G  VR  GWV   R  G     FL++ D      +    D+   +++  V++   
Sbjct: 3   GAGLAGQRVRAGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDAGVADLSTLVQTGTC 62

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++GL+ +    T        +IEL   K+  +   +    P   + +        +  
Sbjct: 63  VLVEGLLKAPPEGTK------QKIELRVDKVLHVGPTDPASYP-IPKTKLSLEFLRDHIH 115

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +T+      R  +  +         F+   TPI+T S  EGA +    + + +  
Sbjct: 116 LRARTNTISAVARIRNALAFATHSFFQEHGFLYVHTPIITTSDCEGAGEMFQATTLIKNL 175

Query: 190 ------------------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
                                    F+   A      Q +    A      +   P FR 
Sbjct: 176 SRVEERAKLKPGIPKKDGKIDYGQDFFSRQAFLTVSGQLQVETYACAVSSVYTFGPTFRA 235

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           E   + R   EF+ ++ E++F +  D +N  E  ++ + +   N       F  +     
Sbjct: 236 EHSHTSRHLAEFWMVEPEIAFADLQDDMNCAEAYVKYMCQWLLN-----KCFDDMELMAK 290

Query: 283 IRRYGTDKPDLR----NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
           +   G     LR     P    + TE     E  V             W I         
Sbjct: 291 LYDKGC-IDRLRMVSSTPFERISYTEAVQLLEEAVRGGKEFEKN--VEWGIDLASEHERY 347

Query: 339 AFCDRMNEWARSQGQ-PGLAYIFWRLDESGN 368
              D   +         G+   + RL++   
Sbjct: 348 LTEDIFKKPVIVYNYPKGIKAFYMRLNDDSK 378



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    EV+ Q  + +G+  E  E          + 
Sbjct: 374 NDDSKTVAAMDILVPKVGELIGGSQREERYEVIQQRIAEMGLPIEPYE----WYLDLRRY 429

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   H G   G +R+++   G  N+R+V  FP      DL
Sbjct: 430 GTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGRADL 469


>gi|291549449|emb|CBL25711.1| aspartyl-tRNA synthetase, archaeal type [Ruminococcus torques
           L2-14]
          Length = 443

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 74/264 (28%), Positives = 122/264 (46%), Gaps = 14/264 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G+ V+++G +H +R  G I F+ +R   G+ Q V   + + F++ K V+    + + G 
Sbjct: 24  IGTEVKVNGAIHTIRDMGTIAFIILRKRGGLVQCVYEENISKFDL-KDVKEADTVEVTG- 81

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPV-FGEREYPESIRFKYRFLDLR 134
           V++ SA+  N       IE+   +++ILS  AE +PLP+   +       +  YR + LR
Sbjct: 82  VLAESAKAPNG------IEIRLGELKILSEPAEPMPLPIAKWKLNTSLEAKLNYRPISLR 135

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
                     +  I+   R  +  E F E  TP + A S EG  +       ++ +   L
Sbjct: 136 NIRERAKFRIQEGIVRGFRDFLYKEGFTEIHTPKIGAKSAEGGANLFRLEYFHRPAI--L 193

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTM 253
            Q+PQ YKQ +M   FDR F+ AP FR E   + R   E+  LD EM +++  +DI+   
Sbjct: 194 QQSPQFYKQ-MMVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFEDIMAME 252

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRI 277
              L+   E            L I
Sbjct: 253 TGFLQYTMELLKKEYARELQILNI 276



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF            +         +DL+  G EI 
Sbjct: 329 DFVFVTHYP------------SKKRPFYAM--------DDPEDPTYTLSFDLLFRGMEIT 368

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H    +L      G++ E +E        AF+ GMPPHGG+  G++R+ M ++ 
Sbjct: 369 TGGQRIHDYHELLAKMEKRGMTDEGMEQ----YLSAFKHGMPPHGGLGIGMERLTMKMMN 424

Query: 553 AKNVREVSLFPMSQNFCDL 571
             NVRE +LFP   +  + 
Sbjct: 425 EDNVRETTLFPRDLSRLEP 443


>gi|257066687|ref|YP_003152943.1| asparaginyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798567|gb|ACV29222.1| asparaginyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 462

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 118/369 (31%), Gaps = 57/369 (15%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
           V   V + GW+   R    + F+++ D       QVV   D   ++          L + 
Sbjct: 14  VDREVCVYGWMRNQRFGKNVGFIELNDGTTFKNLQVVVGSDIENYDELDKQYLSTSLEVK 73

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G V+ ++  + N        E+ A+++ +L  + E       ++            L  R
Sbjct: 74  G-VLVKTGNSKNP------YEIQAKEVNVLGESSEKFPIQ--KQRQTLEFMRTIPHLRAR 124

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS---- 190
            +T       R+ +  S+        F+  + PI+T+S  EGA +    + ++       
Sbjct: 125 TNTYRAVFRVRSILAYSLHKFFQERGFLYVNPPIVTSSDAEGAGEMFNITTIDPEDAPRN 184

Query: 191 ----------FYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F++         Q +    A  F   +   P FR E+  + R   EF+ L
Sbjct: 185 KDGSVDYSKDFFSKKSYLTVSGQLEAEDYALAFGDVYTFGPTFRAEESNTPRHAAEFWML 244

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------R 276
           + EM+F + +  ++  E++++              NF                      R
Sbjct: 245 EPEMAFTDYNLAMDVAEDMIKYSINYLLENAPDEMNFFNTWIDKGLIERLEKVRDAEFAR 304

Query: 277 ICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           + Y  AI            P+   +   TEH  +   ++      V     V   P    
Sbjct: 305 VTYTKAIELLQECGEKFEFPVEWGIDLQTEHERYLSEKI------VGGPVFVTDYPKNIK 358

Query: 335 GGNRAFCDR 343
                  D 
Sbjct: 359 AFYMKRNDD 367



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 50/132 (37%), Gaps = 26/132 (19%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             ++ D+P        K I      F M +        ND     A  +D++  G  E+ 
Sbjct: 347 PVFVTDYP--------KNIKA----FYMKR--------NDDGKTVA-AFDMLVPGVGELI 385

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    + + ++    G++ E  E          + G   H G   G +R VM + G
Sbjct: 386 GGSQREERYDELYKSMEENGLNPEEYE----NYLDLRRFGTVVHSGFGLGFERAVMYVTG 441

Query: 553 AKNVREVSLFPM 564
            KN+R+V  +P 
Sbjct: 442 MKNIRDVLAYPR 453


>gi|269115179|ref|YP_003302942.1| Lysyl-tRNA synthetase [Mycoplasma hominis]
 gi|290457660|sp|P46191|SYK_MYCHP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|268322804|emb|CAX37539.1| Lysyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 488

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 63/283 (22%), Positives = 116/283 (40%), Gaps = 16/283 (5%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y+  S  DL   ++      +G +  +R      F+ ++D+ G  Q+ AN  +     
Sbjct: 42  EKYKNLSREDLDKQNL--EFVFNGRIMTIRGP----FIVLQDNCGQMQIYANKKTLNESS 95

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AK+          G ++S        N  T  + + AQ I +L+ + + PLP        
Sbjct: 96  AKTFSLMDF----GDILSVRGTLSKTN--TDALVIKAQDIVLLTKSLK-PLPDKFHGLVD 148

Query: 122 ESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
              R + R++DL  +   +N  V RT+II  +R    + N+IE  TPIL       A   
Sbjct: 149 PEERRRQRYVDLIMNEKTRNTFVMRTQIIKGIREYFDSLNYIEVDTPILNPILGGAAAKP 208

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +         + L  A +   + L+  G DR ++I   FR+E   +   P EF  ++  
Sbjct: 209 FITFYNALNRNFYLRIATELPLKKLIVGGLDRVYEIGRIFRNEGVDTTHNP-EFTSIEFY 267

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
            ++ +   ++   E V + +  +F+      N F  I ++   
Sbjct: 268 EAYSDLWGMMERTEGVFKHLINKFNIKEVKFNGFD-ITFNFPF 309



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 61/151 (40%), Gaps = 10/151 (6%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG-GMESLKGNDLLSI 477
            +A++ GI     F +  I++   +E   EE  I+     F       +  L   D    
Sbjct: 336 ELAKKHGIKIEKFFRYGHIIN-ELFEKYVEETLIEPT---FVYGHPIEISPLAAIDPDDK 391

Query: 478 K-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCG 532
           +   + +L     E A+     +     LQ F N  + KE               A + G
Sbjct: 392 RFTLRAELFIGTKEFANMFTELNDPIDQLQRFENQLLEKENGNEEANEIDWDFVNALEYG 451

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP GG   GIDR++MLL    ++R+V LFP
Sbjct: 452 MPPTGGSGIGIDRLIMLLTQNDSIRDVVLFP 482


>gi|195867868|ref|ZP_03079867.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|195660445|gb|EDX53703.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
          Length = 454

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 97/268 (36%), Gaps = 15/268 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFEIAKSVRSEWV 70
               G  V++  WV   R    I FL + D   +T + A       + +E   + R    
Sbjct: 14  TKLEGQKVQIKAWVRSNRDSKKIGFLVLNDGSSLTNLQAVYRVDKISNYEEIAAARMWAA 73

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + I+G++                +EL     +IL  ++E  L      +           
Sbjct: 74  VAIEGVIKLTP-------TAKQPLELEVLNAQILKQSDEDFL--LSNNDLSLETLRLNAH 124

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +  H  +  R  +  ++   M    +   + P+ T +  EGA +     + +   
Sbjct: 125 LRPRTNLFHAIMKVRATLAFAVHEFMNQNEYSWLAAPLFTGNDAEGAGETFSIQKFDNEE 184

Query: 191 FYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           F+          Q +    A  F   +   P FR E   ++R   EF+ ++ EM+F++  
Sbjct: 185 FFGKQTHLSVTGQLQAEAYAQAFGNVYTFGPTFRAEKSHTNRHLAEFWMIEPEMAFMDLK 244

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + + +E +++ V +     N     FL
Sbjct: 245 GMQDIVEILIKHVIKAVLEKNQQELEFL 272



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 5/84 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  E+  G  R    E +L+    + +                + G     G   
Sbjct: 369 DLLIPGVGELVGGSQREDNYEKLLKRCQELKMPI----ESLQWYLDLRRFGYYMSSGFGI 424

Query: 542 GIDRIVMLLLGAKNVREVSLFPMS 565
           G +R+VM + G  N+++   FP S
Sbjct: 425 GFERLVMYVTGVNNIKDTIPFPRS 448


>gi|32491012|ref|NP_871266.1| asparaginyl-tRNA synthetase [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|31340439|sp|Q8D2U1|SYN_WIGBR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|25166218|dbj|BAC24409.1| asnS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 466

 Score =  161 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 97/274 (35%), Gaps = 22/274 (8%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V ++GWV   R    GI F+D+ D   +  +              +      C   +   
Sbjct: 20  VEINGWVRTKRNSKLGISFVDVYDGSCLQHIQVIAKKDLSNYKSDILRLTSGCSVKIFGV 79

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                 N+ I     EL A  I++L   ++        + +       +  L  R + + 
Sbjct: 80  LKKSLKNSKI----YELHATCIKVLGWIKDPGKYPISSKPHTLEYLRSFSHLRPRTNIIG 135

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN------------ 187
                R  I   +   +  + FI   +PI+T+ + EG+ +    S  +            
Sbjct: 136 SVSRIRNIIFQEVHNFLNKKGFIWVPSPIITSLNTEGSGEMFKVSTFDFKKIPLNKNKLI 195

Query: 188 --QGSFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  F+          Q      A    + +   P FR E+  + R   EF+ +++E++
Sbjct: 196 NYRKDFFGKRTFLTVSGQLHIESYACSLSKVYTFGPTFRAENSNTSRHLAEFWMVEIEIA 255

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           F + +DI+    N+L  +F++  N       FL 
Sbjct: 256 FAKLNDIILLAYNLLSNIFKKVLNKCLNDLIFLE 289



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 5/86 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D++  G  EI  G  R    E +        +    +   +       + G  PH G   
Sbjct: 381 DILLPGIGEIIGGSEREDRLEYLDSMIKEKRL----IHKNYEWYRDLRKYGTVPHSGFGL 436

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           GI+R++  + G KN+R+V  FP S  
Sbjct: 437 GIERLISYVTGLKNIRDVIPFPRSSK 462


>gi|116328519|ref|YP_798239.1| asparaginyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331247|ref|YP_800965.1| asparaginyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281007|sp|Q04SB3|SYN_LEPBJ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|122283693|sp|Q050D9|SYN_LEPBL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116121263|gb|ABJ79306.1| Asparagine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124936|gb|ABJ76207.1| Asparagine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 435

 Score =  161 bits (406), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 64/285 (22%), Positives = 111/285 (38%), Gaps = 15/285 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA---KSVRSEWV 70
              V   V + GWVH +R      F+ +R+   I QV+A  +    E+    K +R E  
Sbjct: 13  EKYVDRKVVIQGWVHGIRGSNARQFISLRNGGRILQVLAEKEILGEEVFQTVKHLRQETS 72

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++     ++         EL   +I I+  +E  P+     +E+        R 
Sbjct: 73  VSVAGTLVKNEKSSV-------GFELIMDRIRIVGESENYPITP---KEHGIDFLISQRH 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R  +  ++R      +F+   TPILT S  E A         + G+
Sbjct: 123 LWLRSSKQLAILRVRDNLSFAIRKYFHERDFLLIDTPILTGSVGESAGTLFSTEYFDLGN 182

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q  Q Y +  +    ++ F   P FR E  ++ R   EF+ ++ E++F    D L
Sbjct: 183 AY-LAQTGQLYLEAAIF-AHNKVFCYGPTFRAEKSKTRRHLTEFWMVEAEVAFAGHADNL 240

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
              E+ ++ V +E    +      L       +     D P +  
Sbjct: 241 KLQEDFVKTVIKETVQNSLQDLKVLERDPTPLLAYLEKDFPVIDY 285



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 4/76 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E ++       +        +       + G  PH G   G +R++  
Sbjct: 358 EIIGGSEREENYENIILRLEEEKLPV----ESYDWYLDLRKYGSVPHSGFGLGSERMIAW 413

Query: 550 LLGAKNVREVSLFPMS 565
           + G ++VRE   FP  
Sbjct: 414 ICGLQHVRECIPFPRM 429


>gi|298207133|ref|YP_003715312.1| asparaginyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849767|gb|EAP87635.1| asparaginyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 480

 Score =  161 bits (406), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 108/294 (36%), Gaps = 32/294 (10%)

Query: 5   RTHSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEI 61
           +T    D L        + ++GWV   R +    FL + D   I  +    D      +I
Sbjct: 2   KTLKVADVLKSEQYHQEIAVNGWVKAFRSNR---FLALNDGSTINNLQCVIDFENLPEDI 58

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGERE 119
            K +     + I G++               ++E+  + I+I  VA  E++ L +   + 
Sbjct: 59  LKEINIGAAVRIKGILEESEGAG-------QRVEIQVKDIKIEGVANPEDVKLTILSPKR 111

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           +      +   L +R +T    +  R+++  ++        F   +TPI+T S  EGA +
Sbjct: 112 HSLEKLREQAHLRVRTNTGAAVMRLRSKLSFAVHKYFQDNGFYYVNTPIITGSDAEGAGE 171

Query: 180 FLVPSRVN--------------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRD 222
               + ++              +  F+          Q +    A G  + +   P FR 
Sbjct: 172 MFKVTAMDLKNPAKNEDGSINYKEDFFGKETNLTVSGQLEAETFALGLGQVYTFGPTFRA 231

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           E+  + R   EF+ ++ E++F +    ++  E+ ++ V             FL 
Sbjct: 232 ENSNTSRHLAEFWMIEPEVAFCDLAGNMDLAEDFIKYVIGYVLENCDEDLEFLE 285



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 41/117 (35%), Gaps = 14/117 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M           D  +++A   D++  G  EI  G  R    +V+ +  +
Sbjct: 372 DYPANIKAFYMR-------LNEDGKTVRAM--DILFPGIGEIVGGSQREERLDVLKEKMT 422

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + I     E          + G   H G   G +R+V    G  N+R+V  FP + 
Sbjct: 423 ALDIP----EEELWWYLDTRKFGTCVHSGFGLGFERLVQFATGMGNIRDVIPFPRTP 475


>gi|326429846|gb|EGD75416.1| lysyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 498

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 22/256 (8%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDH-YGITQVVANPDSACF---EIAKSVRSEWVLC 72
                ++G V   R  G  I F DI D    I  V    D       E+  ++R   +  
Sbjct: 58  DEEFTIAGRVTSKRQSGKKICFYDIEDGISNIQVVAFGKDHRGEDYEEVHAAIRRGDIAR 117

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G               +G++ L AQ+ ++L+           +     +++   R L 
Sbjct: 118 VTGY---------PGTSKSGELSLFAQEAQLLAPCW----HNIPDSLTDVNLQLSERPLH 164

Query: 133 LRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGS 190
           +  +   KN +  R++++ ++R  +++  F+E  TPIL +      AR F   S      
Sbjct: 165 MLVNQNFKNTLLVRSQVLQALRSFLVSRGFVEVETPILGSQPGGASARPFWTKSNALDRD 224

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            YAL  AP+ Y + L+  G  R F+I   FR+E       P EF   ++  ++   +++ 
Sbjct: 225 -YALRVAPELYLKKLVVGGLPRVFEIGKVFRNEGIDRTHNP-EFTSCELYQAYAPFEELF 282

Query: 251 NTMENVLRGVFEEFSN 266
           +  E++LR V +  + 
Sbjct: 283 DLTEHLLRHVVQAVTG 298



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 4/99 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
           K +   +  + +++L  +G EI +     +  +     F      +   ++         
Sbjct: 398 KQSQTQAGISDRFELYIDGKEIVNAYNELNDPDEQRSRFREQEAERAAGDDEAQVPDEDF 457

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            RA + G+PP  G   GIDR++MLL    N+R+V  FPM
Sbjct: 458 CRALEYGLPPTVGWGMGIDRLIMLLTDTGNIRDVIAFPM 496


>gi|282890720|ref|ZP_06299240.1| hypothetical protein pah_c026o040 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499313|gb|EFB41612.1| hypothetical protein pah_c026o040 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 521

 Score =  160 bits (405), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 61/322 (18%), Positives = 115/322 (35%), Gaps = 30/322 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--------SACFEIAKSVRSEWV 70
               ++G +   R  G   F  I+D  G  Q++ N D            E     +    
Sbjct: 65  QTASVAGRLILFRAMGKNAFGHIQDASGRIQIMFNRDLTQVTGYTPQGEEALSPFKFIEK 124

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               G ++       + N   G++ + A+++ +L     LPLP        +  R++ R+
Sbjct: 125 KIDLGDIIGIEGNLFHTN--KGELTIFAKRVTLLCKTL-LPLPDKHAGLSDKEQRYRKRW 181

Query: 131 LDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQ 188
           LDL  +   KN    RT+I+  +R  +   +F E  TPIL +      AR FL       
Sbjct: 182 LDLIANEHVKNTFLLRTQILRFVRKFLDDAHFTEVETPILQSVYGGAEARPFLTKLNALD 241

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              + +  + +   + L+  G DR ++I   FR+E       P EF  ++   S+ +  D
Sbjct: 242 QEMF-MRISLEPSLKKLIVGGIDRVYEIGKVFRNEGIDRSHNP-EFTLMEAYASYWDYKD 299

Query: 249 ILNTMENVLRGVFEEFSNGN---------------TVSNNFLRICYDDAIRRYGTDKPDL 293
           ++   EN+   +                            + R+   +++  Y    PD 
Sbjct: 300 MMVFCENLFEKMALHLYGTTEVPALSLETQQPIKIDFKAPWKRLTMKESLIEYAKINPDD 359

Query: 294 RNPIIMHNVTEHFVHSEFRVFS 315
                M  +       + +  +
Sbjct: 360 LTDQEMREMLLASETCDPKKIT 381



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 4/119 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E+ +   H+    P       K          +++    G EI +     +  E+  + F
Sbjct: 398 EQHLIQPHHITDHPIETAILCKPKANEEGLIERFESFVLGGEICNAYSELNDPELQRKLF 457

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 ++  +            A   GMPP GGI  GIDR+VMLL    ++R+V  FP
Sbjct: 458 DEQSKRRDSGDEEASPVDEEFIEAIHQGMPPTGGIGIGIDRLVMLLTNEHSIRDVLYFP 516


>gi|212532907|ref|XP_002146610.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Penicillium
           marneffei ATCC 18224]
 gi|210071974|gb|EEA26063.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Penicillium
           marneffei ATCC 18224]
          Length = 578

 Score =  160 bits (405), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 67/299 (22%), Positives = 112/299 (37%), Gaps = 23/299 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             + G+ VR+ G VHR+R    +IF+ + D YG  Q +   D        ++  E  + I
Sbjct: 149 SDEPGTRVRVLGRVHRLRSQKDVIFITLTDGYGYLQCIMTGDMVKTYDMMTLTLETSIAI 208

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFL 131
            G + +   +    N      EL A    I+  A  ++  +      +      +  R L
Sbjct: 209 HGEMRAVPPKQHAPNDR----ELHADFFTIIGKAAGDKEAITSRVAPDADPQTLYDNRHL 264

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR +T    +  R   + + R    A   +E + P +  +  EG           + ++
Sbjct: 265 VLRGETSSSVMKVRAATLKAFRKTFEASRMLEVTPPSMVQTQVEGGSTLFSFDYYGEPAY 324

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  +AS     F I P FR E   + R   E+  ++ E+ F+  DD+L 
Sbjct: 325 --LTQSSQLYLETCLAS-LGDVFCICPSFRAEKSLTRRHLSEYTHIEAELDFITFDDLLE 381

Query: 252 TMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
            +E V+  V EE                +    S  F R+ Y DAI             
Sbjct: 382 HLEEVISRVIEELLADEQTAKLIKELNPDFKVPSRPFRRMRYSDAIDWLREHDIPNEEG 440



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 41/122 (33%), Gaps = 13/122 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M +         D    ++   D++  G  EI  G  R    + ++ A+ 
Sbjct: 469 HFPAEIKAFYMKKD------PQDPRVTESV--DVLMPGVGEIVGGSCRIDDWDELIAAYK 520

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
              +        +       + G  PHGG   G++R +  + G   VRE  L+P     C
Sbjct: 521 REEMDPSP----YYWYTDQRKYGTSPHGGYGLGLERFLAWICGRYTVRECCLYPRFTGRC 576

Query: 570 DL 571
             
Sbjct: 577 TP 578


>gi|256397477|ref|YP_003119041.1| lysyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256363703|gb|ACU77200.1| lysyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 506

 Score =  160 bits (405), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 62/340 (18%), Positives = 126/340 (37%), Gaps = 24/340 (7%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RT +  +L             G    ++G V   R  G + F  +R+     Q + + D 
Sbjct: 43  RTATVAELRAEYSDLEADVATGQRAGITGRVVLSRTGGKLCFATLREGEFEIQAMFSLDR 102

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E  ++ + +  L   G ++  + E I +    G++ +  +   I +     PLP   
Sbjct: 103 LGAESLENWKGDVDL---GDLVGVTGEIITSR--RGELSIMVESWAITAKCLR-PLPDKH 156

Query: 117 EREYPESIRFKYRFLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSP 174
           +       R + R++DL  +    + +  R+ ++ S+R  +    + E  TP+L      
Sbjct: 157 KGLNDPEARVRQRYVDLIVNPEARRMLFTRSDLVRSLRSSLGRRGYTEVETPMLQPIHGG 216

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F           Y L  AP+ Y + L+  G ++ F+I   FR+E   S   P EF
Sbjct: 217 ANARPFETHINAYDMKLY-LRIAPELYLKRLLVGGVEKVFEINRNFRNEGADSTHSP-EF 274

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
             L+    + + D +    +  ++   E             R+  +  +  +  D     
Sbjct: 275 TMLEAYEVYGDYDVMQKLTQQTIQEGAEAIFGSQVA----RRLNAEGEVEEF--DISGDW 328

Query: 295 NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
             + +++     +  E    ++I ++    +   IP   G
Sbjct: 329 KSVTVNDAVSAALGEEISADTEIGALKKLCDSAGIPYAPG 368



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/306 (17%), Positives = 94/306 (30%), Gaps = 34/306 (11%)

Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
            +  F        ++ Y    P+L    ++    E          ++        E   +
Sbjct: 218 NARPFETHINAYDMKLYLRIAPELYLKRLLVGGVEKVFEINRNFRNEGADSTHSPEFTML 277

Query: 330 PAKGGGGNRAFCDRMNEWARSQGQPGL--AYIFWRLDESGNVAGMG----PVAKHLNIVN 383
            A    G+     ++ +    +G   +  + +  RL+  G V          +  +N   
Sbjct: 278 EAYEVYGDYDVMQKLTQQTIQEGAEAIFGSQVARRLNAEGEVEEFDISGDWKSVTVNDAV 337

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL--GIINCNCFEFCWIMDFP 441
           + A+   +             D           R  +  E+   ++        +  DFP
Sbjct: 338 SAALGEEISADTEIGALKKLCDSAGIPYAPGWTRGQVVLEMYEHLVEDKTVLPTFYRDFP 397

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
                ++   +  AH                D     A ++DLV  G EI +G       
Sbjct: 398 -----KDVSPLTRAHR--------------TDPR--LAERWDLVGWGAEIGTGYSELIDP 436

Query: 502 EVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F+   +                 RA +  MPP GGI  GIDRI+M L G   +R
Sbjct: 437 VDQRERFTEQSLLAAGGDPDAMQLDEDFLRALEYAMPPAGGIGVGIDRILMALTGRL-IR 495

Query: 558 EVSLFP 563
           E  LFP
Sbjct: 496 ETILFP 501


>gi|154341471|ref|XP_001566687.1| aspartyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134064012|emb|CAM40203.1| putative aspartyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 550

 Score =  160 bits (405), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 63/283 (22%), Positives = 114/283 (40%), Gaps = 22/283 (7%)

Query: 4   YRTHS---CGDLG-VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH----YGITQVVANPD 55
           Y +H+     DL   + V   V +   V   R  G + F+ +RD       +  V  +  
Sbjct: 60  YMSHTYVPVADLSQPALVDKTVLIRARVSTTRKKGKMAFMVLRDGRDSVQAMVAVEGDVP 119

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               +    + +E ++ ++  V     E    +     IEL  +KI  ++ +        
Sbjct: 120 KEMIDFVGQIPTESIVDVEASVCKV--EQSITSTSHSDIELKVKKIHTVTESLRTLPFTL 177

Query: 116 GE---REYPE------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
            +   +E  E        R   R++DLR          ++R+    R  +I  +F E  +
Sbjct: 178 EDANRKESDEGAKVNFDTRLNSRWMDLRTPASGAIFRLQSRVCQYFRQFLIDSDFCEIHS 237

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P +  +  EG  +       N+  F  L Q+PQ YKQ+++     R F++ P FR E+  
Sbjct: 238 PKIINAPSEGGANVFKLEYFNR--FAYLAQSPQLYKQMVLQGDVPRVFEVGPVFRSENSN 295

Query: 227 SDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGN 268
           + R   EF  LD+EM   E   ++L+  E++   +FE  +   
Sbjct: 296 THRHLTEFVGLDVEMRINEHYYEVLDLAESLFNYMFEHLATHT 338



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   +  PF   +   ++   N         YD+   G EI+SG  R H  +++L     
Sbjct: 442 RFPSSARPFYTMECKDDARFTN--------SYDMFIRGEEISSGAQRIHDPDLLLARAKM 493

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           + +    ++        +F+ G  PHGG   G++R+VML LG  NVR  SLFP       
Sbjct: 494 LNVDLTPIKE----YVDSFRLGAWPHGGFGVGLERVVMLYLGLGNVRLASLFPRDPQRTT 549

Query: 571 L 571
            
Sbjct: 550 P 550


>gi|295663653|ref|XP_002792379.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226279049|gb|EEH34615.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 968

 Score =  160 bits (405), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 72/366 (19%), Positives = 136/366 (37%), Gaps = 28/366 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHY-GITQVVANP----DSACFEIAKSV 65
           + V  VG  V     VH VR     ++F+  R        V+A       +   + A+ +
Sbjct: 154 ITVDLVGQEVMFRARVHHVRRMSSKLVFIVFRQQIITFQGVLAEKAGKVSTFMIQWAEHI 213

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL---------SVAEELPLPVFG 116
           R   ++ + G +       +   I    +EL  +K+ ++         SV E        
Sbjct: 214 RVGSIVKVKGKLSKSLVPVVGCTIH--DVELDIEKLHVIVRREEPVPFSVYEAELTTREE 271

Query: 117 EREYP------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                      +  R   R LDLR D        ++ + N     + ++ FIE  TP L 
Sbjct: 272 HTHDGRRNHILDKTRLSNRILDLRTDASQSIFRIQSAVSNLFHSALDSQGFIEIHTPKLQ 331

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            S+ E        +  ++ ++ A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R 
Sbjct: 332 GSATESGASVFEVNYFSRAAYLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRH 389

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             E+  LD+EM+  E   + L  ++ VL+ +F+          + ++  +      +   
Sbjct: 390 LTEYTGLDIEMAIDEHYHEALEVIDCVLKEIFKGIYVRYRREVDIIKHQFPHEDLVWLDK 449

Query: 290 KPDLRN--PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
            P +R    I + N +      E    ++ L       +  +  +    +    D+    
Sbjct: 450 TPVIRFSDGIKLLNDSGWRRDGEELPTNEDLGTRDEMRLGELIKEKYHTDYYILDKYPRV 509

Query: 348 ARSQGQ 353
           AR    
Sbjct: 510 ARPFYA 515



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 94/266 (35%), Gaps = 39/266 (14%)

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD-GDSCFFIAGDPLKFCSF 412
            G+ Y+ +R  E   +    P    + +  T  IR    ++   DS +   G+ L     
Sbjct: 422 KGI-YVRYR-REVDIIKHQFPHEDLVWLDKTPVIRFSDGIKLLNDSGWRRDGEELPTNED 479

Query: 413 AADARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
               R+ +   LG +I        +I+D           K      PF   +        
Sbjct: 480 LG-TRDEM--RLGELIKEKYHTDYYILD-----------KYPRVARPFYAMED------- 518

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
                     +D+   G EI SGG R H  +++ +   + GI    +E+        F+ 
Sbjct: 519 -PENPEFTNSFDIFVRGQEIVSGGQRIHDEKILEKRMRDAGIDPLTMED----YLEGFRW 573

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPH G   G++R++ML+L   N+R  S+F             P+      L       
Sbjct: 574 GAPPHAGAGIGLERLIMLILKLGNIRLASMFHRDPKSF------PAIPVPSILPYPDSST 627

Query: 592 VENP---KKILKISVTTILRNVYGLK 614
           +E P   ++    + T   R    L+
Sbjct: 628 IEPPWEKEENKHQNNTDKHREFQPLE 653


>gi|296437261|gb|ADH19431.1| lysyl-tRNA synthetase [Chlamydia trachomatis G/11222]
          Length = 526

 Score =  160 bits (405), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 62/314 (19%), Positives = 123/314 (39%), Gaps = 40/314 (12%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-------------IAKSVR 66
            VR +G +   R  G   F  I D+    QV+ N D +                I K + 
Sbjct: 66  KVRFAGRLVLFRSMGKNSFGQILDNDAKIQVMFNRDFSAVAGLAADAGISPIKFIEKKLD 125

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +L ++G +             +G++ +  + + +L  +  + LP        + IR+
Sbjct: 126 LGDILGLEGYLFFT---------HSGELTVLVETVTLLCKSL-ISLPDKHAGLADKEIRY 175

Query: 127 KYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+ DL   + + K  + R+RI+  +R  M  ++F+E  TPIL            V + 
Sbjct: 176 RKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQTIYGGAEATPFVTTL 235

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   L  + +   + L+  G  R ++I   FR+E       P EF  ++   ++ +
Sbjct: 236 QALHAEMFLRISLEIALKKLLVGGMSRVYEIGKVFRNEGIDRTHNP-EFTMIEAYAAYWD 294

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRYGTDK 290
            +D++  +EN++  +    +NG T                   ++R+   ++I  YG   
Sbjct: 295 YNDVMKCVENLIEYIVRALNNGETQVQYSHLKSGPQVVDFKAPWIRMTMKESISVYGGVD 354

Query: 291 PDLRNPIIMHNVTE 304
            DL     +  + E
Sbjct: 355 VDLHADHELRKILE 368



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 46/125 (36%), Gaps = 10/125 (8%)

Query: 451 KIDFAHNPFTMPQGGME---SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM--- 504
           K+   H+    P        +L+  D   +   +++  C G E+ +     +        
Sbjct: 398 KLIAPHHITDHPLETTPLCKTLRSGDETLV--ERFESFCLGKELCNAYSELNDPLQQRKL 455

Query: 505 --LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              Q                     A   GMPP GG   GIDR+VM+L  A ++R+V  F
Sbjct: 456 LEEQMRKKALNPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMMLTDAASIRDVLFF 515

Query: 563 PMSQN 567
           P+ + 
Sbjct: 516 PVMRR 520


>gi|291563445|emb|CBL42261.1| aspartyl-tRNA synthetase, archaeal type [butyrate-producing
           bacterium SS3/4]
          Length = 443

 Score =  160 bits (405), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 73/275 (26%), Positives = 108/275 (39%), Gaps = 15/275 (5%)

Query: 7   HSCGDL-GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
            +  +L     VG+ V + G VH +R  G I F+ +R   G+ Q V    S   E+   +
Sbjct: 13  KTLEELEREESVGTEVTVEGMVHSIRDMGEISFVILRSRDGLLQTVIQAGSEK-EVLSEI 71

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           R    + + G V                IE+      ILS  EE       + + P S+ 
Sbjct: 72  REGQAVRVTGTVFKEER-------APHGIEIHLADARILSKPEEPMPIAIDKWKLPTSLE 124

Query: 126 --FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
                R + LR          +  I    R  M ++ F E  TP + A S EG  +    
Sbjct: 125 ANLNRRAIALRNVRERAKFRIQEGICRGFREFMTSQGFTEIHTPKIGAKSAEGGANLFKL 184

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              ++ +  A  Q+PQ YKQ +M   FDR F+  P FR E   + R   E+  LD EM F
Sbjct: 185 QYFHRPAVLA--QSPQFYKQ-MMVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGF 241

Query: 244 VE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           ++   DI      +L+ V E            L+I
Sbjct: 242 IDSFMDICKMETAMLQYVVELLKKDYAKEVALLKI 276



 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF            +         +DL+  G EI 
Sbjct: 329 DFVFVTHYP------------SKKRPFYAM--------DDPENKEFTLSFDLLFRGLEIT 368

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H  E +L+  +  G+  E +E+        F+ GMPPHGG+  G++R+ M ++G
Sbjct: 369 TGGQRIHDYETLLKKIAEKGMDIEGMED----YLDCFKYGMPPHGGLGIGLERLTMKMIG 424

Query: 553 AKNVREVSLFPMSQNFCDL 571
             NVRE  LFP        
Sbjct: 425 EDNVREACLFPRDMTRLKP 443


>gi|303389614|ref|XP_003073039.1| aspartyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302183|gb|ADM11679.1| aspartyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 473

 Score =  160 bits (405), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 68/315 (21%), Positives = 119/315 (37%), Gaps = 33/315 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--------FE 60
             DL     G  V + G+V +    G  IF+ +RD+    Q +               F 
Sbjct: 16  IKDLSGDLDGRHVIVRGFVLKSSCTGKYIFIVLRDNGCTVQCMCERPKDGKGDLSIEEFN 75

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             K V  E  + + G V+ +  E    +     +E+      +LS+A++       +   
Sbjct: 76  SLKKVAHESYIEVKGRVVKQETEISGCSKK--DVEIRILGFSVLSMADKNLPFTMKDVSA 133

Query: 121 PES--------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                            IR   R LDLR             ++   R  +    F+E  T
Sbjct: 134 TIEEREKNPTLQSVAYHIRLDNRSLDLRAPQTRATFRVIDGVMFFFRDYLRRNGFVEIKT 193

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P L  SS EG  +        + +F A  Q+PQ YKQ+ +A G  R ++I   +R E+  
Sbjct: 194 PKLIGSSSEGGANLFSVDYFKKKAFMA--QSPQLYKQMAVAGGLKRVYEIGHVYRAEESN 251

Query: 227 SDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            +R   EF  LDMEM    + +D++  + ++   +F+      +   + +R  +     +
Sbjct: 252 INRYLSEFVGLDMEMEISTDYNDVIKFIHSMFVSIFDNLKKEYSEELDTIRSFHRFEDVK 311

Query: 286 YGTDKPDLRNPIIMH 300
           Y       R P+++ 
Sbjct: 312 YN------REPVVLT 320



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 13/119 (10%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K    +  PF   +                  YD +  G EI SG  R ++ E +++  S
Sbjct: 365 KDYPISARPFYTYRNE---------EKGITRSYDFILRGEEILSGAQRVNVYEDLVRYVS 415

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             GIS     +  GG   +F+ G+PPHGG   G++R++    G  ++R  SLFP   + 
Sbjct: 416 EHGISP----SSLGGYLESFKYGVPPHGGCGIGLERVMKAYFGMGDIRCFSLFPRDPSR 470


>gi|255311616|ref|ZP_05354186.1| lysyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317917|ref|ZP_05359163.1| lysyl-tRNA synthetase [Chlamydia trachomatis 6276s]
          Length = 526

 Score =  160 bits (405), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 62/314 (19%), Positives = 123/314 (39%), Gaps = 40/314 (12%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-------------IAKSVR 66
            VR +G +   R  G   F  I D+    QV+ N D +                I K + 
Sbjct: 66  KVRFAGRLVLFRSMGKNSFGQILDNDAKIQVMFNRDFSAVAGLAADAGISPIKFIEKKLD 125

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +L ++G +             +G++ +  + + +L  +  + LP        + IR+
Sbjct: 126 LGDILGLEGYLFFT---------HSGELTVLVETVTLLCKSL-ISLPDKHAGLADKEIRY 175

Query: 127 KYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+ DL   + + K  + R+RI+  +R  M  ++F+E  TPIL            V + 
Sbjct: 176 RKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQTIYGGAEATPFVTTL 235

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   L  + +   + L+  G  R ++I   FR+E       P EF  ++   ++ +
Sbjct: 236 QALHAEMFLRISLEIALKKLLVGGMSRVYEIGKVFRNEGIDRTHNP-EFTMIEAYAAYWD 294

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRYGTDK 290
            +D++  +EN++  +    +NG T                   ++R+   ++I  YG   
Sbjct: 295 YNDVMKCVENLIEYIVRALNNGETQVQYSHLKSGPQVVDFKAPWIRMTMKESISVYGGVD 354

Query: 291 PDLRNPIIMHNVTE 304
            DL     +  + E
Sbjct: 355 VDLHADHELRKILE 368



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 46/125 (36%), Gaps = 10/125 (8%)

Query: 451 KIDFAHNPFTMPQGGME---SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM--- 504
           K+   H+    P        +L+  D   +   +++  C G E+ +     +        
Sbjct: 398 KLIAPHHITDHPLETTPLCKTLRSGDETLV--ERFESFCLGKELCNAYSELNDPLQQRKL 455

Query: 505 --LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              Q                     A   GMPP GG   GIDR+VM+L  A ++R+V  F
Sbjct: 456 LEEQMRKKALNPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMMLTDAASIRDVLFF 515

Query: 563 PMSQN 567
           P+ + 
Sbjct: 516 PVMRR 520


>gi|332236937|ref|XP_003267656.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 2
           [Nomascus leucogenys]
          Length = 401

 Score =  160 bits (405), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 76/326 (23%), Positives = 134/326 (41%), Gaps = 43/326 (13%)

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-- 117
           + A ++  E ++ ++G+V  R       +     +EL  QKI ++S+AE        +  
Sbjct: 3   KFAANINKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAV 60

Query: 118 -----------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                          +  R   R +DLR  T       ++ I +  R  +I + F+E  T
Sbjct: 61  RPEAEGEEEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQT 120

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P + +++ EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  
Sbjct: 121 PKIISAASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSN 178

Query: 227 SDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF- 274
           + R   EF  LD+EM+F        ++I +TM  + +G+ E F       N       F 
Sbjct: 179 THRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFK 238

Query: 275 -----LRICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSV 320
                LR+ Y +A+           D+ DL  P    + ++ +    ++F +  K  L+V
Sbjct: 239 FLEPTLRLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAV 298

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNE 346
            P Y +          +     R  E
Sbjct: 299 RPFYTMPDPRNPKQSNSYDMFMRGEE 324



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 245 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 294

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 295 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 345

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 346 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 401


>gi|330924413|ref|XP_003300630.1| hypothetical protein PTT_11927 [Pyrenophora teres f. teres 0-1]
 gi|311325146|gb|EFQ91278.1| hypothetical protein PTT_11927 [Pyrenophora teres f. teres 0-1]
          Length = 1041

 Score =  160 bits (404), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 137/380 (36%), Gaps = 35/380 (9%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH----YGITQVVANPDSACFEI 61
           H   D    D+G  V     +H +R      +FL  R       G+    A+        
Sbjct: 211 HKIQDFSAKDIGKEVVFRARIHHLRKMSSKFVFLMFRQQLATIQGVLVEHADISKYMLYW 270

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIIT-GQIELSAQKIEI----------------L 104
           A+ + +E ++ + G++    A+       T   +E+S   + +                +
Sbjct: 271 AEHLDAETIVLVKGILQEPKAKQGEVLGATIHDVEVSVHALHVEASVTDHLPFNVNEAEV 330

Query: 105 SVAEELPLPVFGEREYPES-------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157
           + AE       G+ +   S        R   R +DLR          ++ I    R ++ 
Sbjct: 331 TQAEVDAELAKGDHKEGHSRVKIADRTRLNNRVIDLRTTASQGIFRIQSGICRLFRNQLD 390

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
           +E FIE  TP L   + E            +G+F A  Q+PQ  KQ+ +++ F R ++I 
Sbjct: 391 SEGFIEIHTPKLQGGATESGASVFKIDYFGRGAFLA--QSPQLAKQMAISADFGRVYEIG 448

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
             FR E+  + R   E+  LD+EM   E   ++L  ++   + +F+            ++
Sbjct: 449 AVFRAENSNTYRHLTEYTGLDLEMQIDEHYHEVLRVLDRTFKAIFKGIYEQYRPEIEVIK 508

Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNVTEH-FVHSEFRVF--SKILSVNPGYEVWAIPAKG 333
             +      +  + P +     +  + E  +   + +    ++ L      ++  +  + 
Sbjct: 509 KHFPHEDLVWLDETPIIPFADAVRMLNESGWRDDDGKELDVNEDLGTRDEVQLGRVIKQK 568

Query: 334 GGGNRAFCDRMNEWARSQGQ 353
            G +    D+    AR    
Sbjct: 569 LGTDYYILDKFPANARPFYA 588



 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 91/237 (38%), Gaps = 35/237 (14%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-IINCNCFEFCWI 437
           L+          + M +        G  L         R+ +  +LG +I        +I
Sbjct: 519 LDETPIIPFADAVRMLNESGWRDDDGKELDVNEDLG-TRDEV--QLGRVIKQKLGTDYYI 575

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           +D           K      PF            N+     +  +D+ C G EI SGG R
Sbjct: 576 LD-----------KFPANARPFYAMND------PNNPNVTNS--FDIFCRGQEILSGGQR 616

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            H ++++L+    + +    +E+      +AFQ G PPHGG   G++RI+ML++   N+R
Sbjct: 617 IHDADMLLEKMRKLKVDPSSMED----YIQAFQWGAPPHGGGGIGLERILMLMMNLGNIR 672

Query: 558 EVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISVTTILRNVYGLK 614
             S+FP            P    ++QLR      +  P +    +V  I  ++  ++
Sbjct: 673 HASMFPRDPKSL------PEKPVIKQLRHPEASTMHPPWEGQDRAVAKI--DLQPIE 721


>gi|226355897|ref|YP_002785637.1| aspartyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226317887|gb|ACO45883.1| putative Aspartate--tRNA ligase (Aspartic acid translase)
           [Deinococcus deserti VCD115]
          Length = 429

 Score =  160 bits (404), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 77/344 (22%), Positives = 132/344 (38%), Gaps = 39/344 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V+L G++H  R  GG+ FL +RD  GI Q V +         +   SE  + + G V
Sbjct: 19  GQTVKLQGFLHARRDLGGVQFLVLRDVSGIAQCVGSG-------LELPLSESSVEVVGSV 71

Query: 78  MSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            +            G  E+  Q   I+S   A         +          YR + +R 
Sbjct: 72  KAHPK-------APGGYEVQVQSFRIISAATAPTPVEIPKMDWHVNPETMLDYRVVSVRG 124

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
                 +  +  ++ + R  ++ E F E STP + ++  EG  +        Q ++ A  
Sbjct: 125 LKERAALKVQAELVAAFRDHLMTEGFTEISTPKIVSAGAEGGANLFPIDYFGQPAYLA-- 182

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTME 254
           Q+PQ YKQ +M   F+R F++AP +R E+  + R   E+  LD+EM F+ +++D++    
Sbjct: 183 QSPQLYKQ-IMVGVFERVFEVAPVYRAEEHATSRHLNEYLSLDVEMGFIEDEEDVMALEN 241

Query: 255 NVLRGVFEEFSNGNTVSN------------NFLRICYDDAIRRYGTDK------PDLRNP 296
            +L  +                        +  RI   DA +  G          DL +P
Sbjct: 242 RLLAAIMTRLRERCETEFSLLGASIPDVPAHIPRITLLDARQLVGEKYGHPVGGKDL-DP 300

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
                + +H+  +E   F  +         +      G   R F
Sbjct: 301 EAERLLCQHYAETEGSDFVFVTKYPRAARPFYAHPDEGDLTRGF 344



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 33/173 (19%)

Query: 412 FAADARNHIAQELGI------INCNCFEFCWIMDFPFYEWNEEEK-------KIDFAHNP 458
              DAR  + ++ G       ++                + E E        K   A  P
Sbjct: 277 TLLDARQLVGEKYGHPVGGKDLDPEAERLL------CQHYAETEGSDFVFVTKYPRAARP 330

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F       +              +DL+  G EI SGG R H   +++++ +   ++    
Sbjct: 331 FYAHPDEGD----------LTRGFDLLFRGIEITSGGQRIHDHAMLMESIAAYKLNP--- 377

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
                G    F+ GMPPHGG A G +R+   LLG  NVR    FP  ++    
Sbjct: 378 -ETLTGYTEVFKYGMPPHGGFAIGAERLTAKLLGISNVRYARAFPRDRHRLTP 429


>gi|269128167|ref|YP_003301537.1| lysyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268313125|gb|ACY99499.1| lysyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 1113

 Score =  160 bits (404), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 107/269 (39%), Gaps = 21/269 (7%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RT    D+          +  G  VR++G V   R HG ++F+ +RD  G  QV+ + D 
Sbjct: 646 RTDFAADIRARFGGLPPDARTGEQVRIAGRVMLAREHGRLVFVTLRDETGDIQVMLSADR 705

Query: 57  ACFE------IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
              +      +  S+R+   L   G  +  + E + +    G++ + A    + +     
Sbjct: 706 LEPDGPDGAPVPGSLRAWKRLIDLGDQVGIAGEVVTSK--RGELSVLATSWTLTAKCLR- 762

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           PLP           R + R+++   +    + +  R   + ++R R+    ++E  TP+L
Sbjct: 763 PLPNKRSGLADPEARVRQRYVEFIVNDEARRMLRMRGDAVAAIRDRLRELGYLEVETPML 822

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   AR F           Y L  AP+ Y + L+  G  + F+I   FR+E     
Sbjct: 823 QPIHGGAAARPFTTRINAYNMQLY-LRIAPELYLKRLLVGGVGKVFEINRNFRNEGVSPK 881

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVL 257
             P EF  L+    + + D +     +++
Sbjct: 882 HNP-EFTMLEAYEPYGDYDTMAALTRDLV 909



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 53/154 (34%), Gaps = 28/154 (18%)

Query: 414  ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                  + + L  +        ++ D+P               +P T P      L    
Sbjct: 979  GKLVQELFEAL--VEPGIKAPTFVRDYP------------AETSPLTRPHRADPRL---- 1020

Query: 474  LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAF 529
                 A ++DL+  G E+ +         +  Q  +   +                 RA 
Sbjct: 1021 -----AEKWDLIVFGLELGTAYSELIDPILQRQRLTEQSLLAAGGDPEAMELDEDFLRAL 1075

Query: 530  QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  MPP GG+  GIDR+++ L G K++RE   FP
Sbjct: 1076 EYAMPPAGGMGMGIDRLLITLTG-KSIRETIPFP 1108


>gi|296439735|sp|B8ZRJ4|LYSX_MYCLB RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|296439736|sp|Q9CC23|LYSX_MYCLE RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
          Length = 1133

 Score =  160 bits (404), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 63/275 (22%), Positives = 113/275 (41%), Gaps = 14/275 (5%)

Query: 6   THSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           +H+    L   D G  V +SG + R+R +GG++F  +RD  G  QV+   D+   E    
Sbjct: 673 SHTVAQALDADDEG-TVSISGRILRIRDYGGVLFAHVRDWSGEIQVLL--DNLVLECCCI 729

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
                 + +  +V        + N   G   L  +   ++      PLP   +       
Sbjct: 730 ADFTAAIDLGDIVEMTGNMGFSKN---GTRSLIVRNWRLIGKCLR-PLPNKWKGLTDPEA 785

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLV 182
           R + R++DL  +T  +N++  R+ ++ S+R  + A+ F+E  TPIL        AR F  
Sbjct: 786 RVRTRYVDLAVNTESRNLIMARSCVLRSVREMLFAKGFVEVETPILQQIHGGATARPFAT 845

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   +
Sbjct: 846 RINTYDMDLF-LRIAPELYLKRLCIGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQA 903

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
             +    ++    +++   E  +     +    RI
Sbjct: 904 HADYLMWIDGCRELIQNAAEAANGT--QTLMRPRI 936



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 73/219 (33%), Gaps = 29/219 (13%)

Query: 349  RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
            R +G  G A     +D SG V  +  V + ++    E +    ++         A  P  
Sbjct: 935  RIEGASGTANHLEPIDISG-VWPVKTVYEAVSEALGECVDTSTELATLRKLSDAAHIPYW 993

Query: 409  FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                       + + L  +     +  + +DFP             + +P T P      
Sbjct: 994  PHWDTGAVVLKLYEHL--VENRTDQPTFYIDFP------------TSVSPLTRPHRS--- 1036

Query: 469  LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGG 524
                      A ++DLV  G E+ +            +      +               
Sbjct: 1037 ------KPGVAERWDLVAWGIELGTAYSELTDPVEQRRRLHEQSLLAVGGNPEAMELDED 1090

Query: 525  LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              +A +  MPP GG+  GIDR+VML+ G  ++RE   FP
Sbjct: 1091 FLQAMEYAMPPTGGLGMGIDRLVMLITGR-SIRETLPFP 1128


>gi|15827728|ref|NP_301991.1| lysyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221230205|ref|YP_002503621.1| lysyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|13093279|emb|CAC31774.1| C-term lysyl-tRNA synthase [Mycobacterium leprae]
 gi|219933312|emb|CAR71488.1| C-term lysyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 1039

 Score =  160 bits (404), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 63/275 (22%), Positives = 113/275 (41%), Gaps = 14/275 (5%)

Query: 6   THSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           +H+    L   D G  V +SG + R+R +GG++F  +RD  G  QV+   D+   E    
Sbjct: 579 SHTVAQALDADDEG-TVSISGRILRIRDYGGVLFAHVRDWSGEIQVLL--DNLVLECCCI 635

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
                 + +  +V        + N   G   L  +   ++      PLP   +       
Sbjct: 636 ADFTAAIDLGDIVEMTGNMGFSKN---GTRSLIVRNWRLIGKCLR-PLPNKWKGLTDPEA 691

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLV 182
           R + R++DL  +T  +N++  R+ ++ S+R  + A+ F+E  TPIL        AR F  
Sbjct: 692 RVRTRYVDLAVNTESRNLIMARSCVLRSVREMLFAKGFVEVETPILQQIHGGATARPFAT 751

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   +
Sbjct: 752 RINTYDMDLF-LRIAPELYLKRLCIGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQA 809

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
             +    ++    +++   E  +     +    RI
Sbjct: 810 HADYLMWIDGCRELIQNAAEAANGT--QTLMRPRI 842



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 73/219 (33%), Gaps = 29/219 (13%)

Query: 349  RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
            R +G  G A     +D SG V  +  V + ++    E +    ++         A  P  
Sbjct: 841  RIEGASGTANHLEPIDISG-VWPVKTVYEAVSEALGECVDTSTELATLRKLSDAAHIPYW 899

Query: 409  FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
                       + + L  +     +  + +DFP             + +P T P      
Sbjct: 900  PHWDTGAVVLKLYEHL--VENRTDQPTFYIDFP------------TSVSPLTRPHRS--- 942

Query: 469  LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGG 524
                      A ++DLV  G E+ +            +      +               
Sbjct: 943  ------KPGVAERWDLVAWGIELGTAYSELTDPVEQRRRLHEQSLLAVGGNPEAMELDED 996

Query: 525  LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              +A +  MPP GG+  GIDR+VML+ G  ++RE   FP
Sbjct: 997  FLQAMEYAMPPTGGLGMGIDRLVMLITGR-SIRETLPFP 1034


>gi|195164590|ref|XP_002023129.1| GL21125 [Drosophila persimilis]
 gi|194105214|gb|EDW27257.1| GL21125 [Drosophila persimilis]
          Length = 557

 Score =  160 bits (404), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 62/345 (17%), Positives = 128/345 (37%), Gaps = 22/345 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G  + GS V++ GWVHR+R  G           + +   V N        A ++ +E  +
Sbjct: 129 GTENRGSRVKVYGWVHRLRRQGKGPDIHHAEGWHWVPACVLNDQLCQTYEALTLSTESTV 188

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  EL+    E++ +A           E    ++   R +
Sbjct: 189 VLFGTLKLIPEG----KTAPGGHELNVDYWELIGLAPPGGADAILNEEAQPDVQLDNRHI 244

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R+ ++ + R   +A  + E + P L  +  EG          ++ ++
Sbjct: 245 MIRGENTSKVLKMRSVVMQAFRAHYLARGYNEVTPPTLVQTQVEGGSTLFKLQYFSEEAY 304

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ----- 246
             L Q+ Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+       
Sbjct: 305 --LTQSSQLYLETCLP-ALGDVFTIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFDDLLD 361

Query: 247 ---DDILNTMENVLR----GVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              D + + ++ VL+     + +E + +    +  F R+ Y DAI+    +    ++   
Sbjct: 362 RLEDLVCDVVDRVLKSPWGNLVKELNPDFKPPTKPFRRMNYSDAIKWLKENNV-TKDDGT 420

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
            +   E    +  R  +  ++       +    K    +R   D+
Sbjct: 421 FYEFGEDIPEAPERKMTDAINEPIMLCRFPAEIKSFYMSRCPEDK 465



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R   SE +L+ +  
Sbjct: 448 RFPAEIKSFYMSRCPEDKTLTESVDV-------LLPNVGEIVGGSMRIFDSEELLKGYQR 500

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI  +     +         G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 501 EGIDPKP----YYWYTDQRIYGTLPHGGYGLGLERFLCWLLNRYHIREVCLYPR 550


>gi|329943177|ref|ZP_08291951.1| lysyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287759|ref|YP_004422660.1| lysyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313848331|emb|CBY17334.1| putative lysyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325507194|gb|ADZ18832.1| lysyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328814724|gb|EGF84714.1| lysyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328915015|gb|AEB55848.1| lysyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 526

 Score =  160 bits (404), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 67/317 (21%), Positives = 126/317 (39%), Gaps = 42/317 (13%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-------------IAKSVR 66
            V++SG +   R  G   F  I D+    QV+ N D +                I K + 
Sbjct: 66  KVKISGRMVLFRSMGKNAFAQILDNDQKIQVMFNRDFSSVAGLPVDAEITPIKFIEKKLD 125

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +L I+G +             +G++ +  + + +L  +  + LP        + IR+
Sbjct: 126 LGDILGIEGYLFFT---------HSGELTILVETVSLLCKSL-ISLPDKHAGLSDKEIRY 175

Query: 127 KYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL   D + +  +KR+RII  +R  M A+ FIE  TPIL        A  F+   
Sbjct: 176 RKRWLDLISSDEVRQTFLKRSRIIKLIRHYMDAQGFIEVETPILQNVYGGAEATPFITTL 235

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  + L  +P+   + ++  G  R ++I   FR+E       P EF  ++   + +
Sbjct: 236 NALHSEVF-LRISPEISLKKVLVGGTPRIYEIGKVFRNEGIDRTHNP-EFTIMEAYATNI 293

Query: 245 EQDDILNTMENVLRGVFEEFSN---------------GNTVSNNFLRICYDDAIRRYGTD 289
           +   ++  +EN++  +  E +N                      ++R+   D+I+ YG  
Sbjct: 294 DYHSVMTYVENLVEHLVCELNNGSTVLTYSHLKQGPVSIDFKAPWIRMTMKDSIKTYGGV 353

Query: 290 KPDLRNPIIMHNVTEHF 306
             DL     +  + +  
Sbjct: 354 DVDLHGDHELRKILKEC 370



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 16/128 (12%)

Query: 451 KIDFAHNPFTMPQGGME---SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS------ 501
           K+   H+    P        SL+  D   +   +++  C G E+ +     +        
Sbjct: 398 KLIAPHHITDHPVETTPLCKSLRSGDGDFV--ERFESFCLGKELCNAYSELNDPLRQRVL 455

Query: 502 --EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             +   +   +       ++  F     A   G+PP GG   GIDR+VM+L  A ++R+V
Sbjct: 456 LEKQQEKKALDPDSEYHPIDEEF---LEALCQGLPPTGGFGIGIDRLVMILTDAASIRDV 512

Query: 560 SLFPMSQN 567
             FP  + 
Sbjct: 513 LYFPAMRR 520


>gi|15605514|ref|NP_220300.1| lysyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76789523|ref|YP_328609.1| lysyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237803211|ref|YP_002888405.1| lysyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|237805132|ref|YP_002889286.1| lysyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|6226185|sp|O84786|SYK_CHLTR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123606590|sp|Q3KKR1|SYK_CHLTA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|3329245|gb|AAC68376.1| Lysyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76168053|gb|AAX51061.1| lysyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273432|emb|CAX10347.1| lysyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274445|emb|CAX11240.1| lysyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 526

 Score =  160 bits (404), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 62/314 (19%), Positives = 123/314 (39%), Gaps = 40/314 (12%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-------------IAKSVR 66
            VR +G +   R  G   F  I D+    QV+ N D +                I K + 
Sbjct: 66  KVRFAGRLVLFRSMGKNSFGQILDNDAKIQVMFNRDFSAVAGLAADAGISPIKFIEKKLD 125

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +L ++G +             +G++ +  + + +L  +  + LP        + IR+
Sbjct: 126 LGDILGLEGYLFFT---------HSGELTVLVETVTLLCKSL-ISLPDKHAGLADKEIRY 175

Query: 127 KYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+ DL   + + K  + R+RI+  +R  M  ++F+E  TPIL            V + 
Sbjct: 176 RKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQTIYGGAEATPFVTTL 235

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   L  + +   + L+  G  R ++I   FR+E       P EF  ++   ++ +
Sbjct: 236 QALHAEMFLRISLEIALKKLLVGGMSRVYEIGKVFRNEGIDRTHNP-EFTMIEAYAAYWD 294

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRYGTDK 290
            +D++  +EN++  +    +NG T                   ++R+   ++I  YG   
Sbjct: 295 YNDVMKCVENLVEYIVRALNNGETQVQYSHLKSGPQVVDFKAPWIRMTMKESISVYGGVD 354

Query: 291 PDLRNPIIMHNVTE 304
            DL     +  + E
Sbjct: 355 VDLHADHELRKILE 368



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 46/125 (36%), Gaps = 10/125 (8%)

Query: 451 KIDFAHNPFTMPQGGME---SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM--- 504
           K+   H+    P        +L+  D   +   +++  C G E+ +     +        
Sbjct: 398 KLIAPHHITDHPLETTPLCKTLRSGDETLV--ERFESFCLGKELCNAYSELNDPLQQRKL 455

Query: 505 --LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              Q                     A   GMPP GG   GIDR+VM+L  A ++R+V  F
Sbjct: 456 LEEQMRKKALNPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMMLTDAASIRDVLFF 515

Query: 563 PMSQN 567
           P+ + 
Sbjct: 516 PVMRR 520


>gi|115447981|ref|NP_001047770.1| Os02g0686400 [Oryza sativa Japonica Group]
 gi|41052719|dbj|BAD07576.1| putative aspartate-tRNA ligase [Oryza sativa Japonica Group]
 gi|113537301|dbj|BAF09684.1| Os02g0686400 [Oryza sativa Japonica Group]
 gi|215704413|dbj|BAG93847.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222623467|gb|EEE57599.1| hypothetical protein OsJ_07966 [Oryza sativa Japonica Group]
          Length = 549

 Score =  160 bits (404), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 70/343 (20%), Positives = 122/343 (35%), Gaps = 31/343 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVV------ANPDSACFEI 61
            G L  +  G  V + G    +RP    + F+ +R+     Q V      A   +     
Sbjct: 89  IGGLDEAAAGRSVLIRGAAQAIRPVSKKMAFVVLRESMSTVQCVLVASADAGVSTQMVRF 148

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-------------- 107
           A S+  E ++ ++G+V             T Q+E+  +KI  ++ A              
Sbjct: 149 ATSLSKESIVDVEGVVSLPKEPL---KATTQQVEIQVRKIYCINRAIPTLPINLEDASRS 205

Query: 108 ----EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
               E+            +  R  YR +DLR          + ++ N  R   +++NF+ 
Sbjct: 206 EAEIEKAEQAGEKLVRVGQDTRLNYRAIDLRTPANQAIFRIQCQVENKFREYFLSKNFVG 265

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             +P L A S EG            G    L Q+PQ YKQ+ +  GF+R F++ P FR E
Sbjct: 266 IHSPKLIAGSSEGGAAVFKLQYN--GQPACLAQSPQLYKQMAICGGFERVFEVGPVFRAE 323

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           +  + R   EF  LD EM   E   ++ + ++ +   +F+  +         +   Y   
Sbjct: 324 NSNTHRHLCEFVGLDAEMEIKEHYFEVCDIIDGLFVAIFKHLNENCKKELETINRQYPFE 383

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
             +Y      L     +  + E     E        +      
Sbjct: 384 PLKYLEKTLKLTYEEGIQMLKEAGTEIEPMGDLNTEAEKKLGR 426



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 73/214 (34%), Gaps = 23/214 (10%)

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GL    ++         +  + +       + +   L +   +    +     +      
Sbjct: 356 GLFVAIFKHLNENCKKELETINRQYPFEPLKYLEKTLKLTYEEGIQMLKEAGTEIEP-MG 414

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           D      ++LG +    +   +   F  Y       +   A  PF               
Sbjct: 415 DLNTEAEKKLGRLVKEKYGTEF---FILY-------RYPLAVRPFYTMPCYD-------- 456

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               +  +D+   G EI SG  R H+ E++ +  +  GI    + +       +F  G P
Sbjct: 457 NPAYSNSFDVFIRGEEIISGAQRIHLPELLTKRATECGIDASTISS----YIESFSYGAP 512

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PHGG   G++R+VML     N+R+ SLFP     
Sbjct: 513 PHGGFGVGLERVVMLFCALNNIRKTSLFPRDPQR 546


>gi|10835611|pdb|1EOV|A Chain A, Free Aspartyl-Trna Synthetase (Asprs) (E.C. 6.1.1.12) From
           Yeast
          Length = 487

 Score =  160 bits (404), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 66/284 (23%), Positives = 109/284 (38%), Gaps = 25/284 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACF------EIAKSVR 66
             D    V     VH  R  G  + FL +R    + Q +   +          + A S+ 
Sbjct: 32  AKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLN 91

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ + G+V        +A +    +E+   KI  +S   E    +  +    E    
Sbjct: 92  LESIVLVRGIVKKVDEPIKSATV--QNLEIHITKIYTISETPEALPILLEDASRSEAEAE 149

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R  YR +DLR  T       +  +    R  +  + F E  TP L  + 
Sbjct: 150 AAGLPVVNLDTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLLGAP 209

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG       +     ++ A  Q+PQ  KQ L+ + F+R ++I P FR E+  + R   E
Sbjct: 210 SEGGSSVFEVTYFKGKAYLA--QSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRHMTE 267

Query: 234 FYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           F  LDMEM+F E   ++L+T+  +   +F E           +R
Sbjct: 268 FTGLDMEMAFEEHYHEVLDTLSELFVFIFSELPKRFAHEIELVR 311



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 46/119 (38%), Gaps = 12/119 (10%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K      PF TMP                +  YD    G EI SG  R H   ++ +   
Sbjct: 377 KFPLEIRPFYTMPDPANPKY---------SNSYDFFMRGEEILSGAQRIHDHALLQERMK 427

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             G+S E  +         F  G PPH G   G++R+VM  L  KN+R  SLFP     
Sbjct: 428 AHGLSPE--DPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRDPKR 484


>gi|218295720|ref|ZP_03496516.1| aspartyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243879|gb|EED10406.1| aspartyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 422

 Score =  160 bits (404), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 19/233 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            + VG  V L G++H  R  G + FL +RD  G+ QVV                E  L +
Sbjct: 9   PAHVGQEVELMGFLHWRRDLGKVQFLLLRDRSGVVQVVTGGMRLPL-------PESSLRV 61

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YPESIRFKYRFL 131
            GLV+             G +E+ A+++E+LS A E       + E         +YR++
Sbjct: 62  RGLVVENPK-------APGGLEVQAKEVEVLSPALEPTPVEIPKEEWRAHPDTLLEYRYV 114

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR +     +  +  ++   R  +  ++F E  TP +  +  EG           + ++
Sbjct: 115 TLRGEKARAPLKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGAEGGSGLFGVDYFEKRAY 174

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
            A  Q+PQ YKQ +M   F+R +++AP +R E+  + R   E+  LD+EM F+
Sbjct: 175 LA--QSPQLYKQ-IMVGVFERVYEVAPVWRMEEHNTSRHLNEYLSLDVEMGFI 224



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 54/158 (34%), Gaps = 24/158 (15%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            D      + LG      +   W      +       +   A  PF              
Sbjct: 289 LDLSEEAERLLGQYARERWGSDW-----LFL-----TRYPRAIRPFYTYPEDD------- 331

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                   +DL+  G EI SGG R H    +L +    G+        F G    F+ GM
Sbjct: 332 ---GTTRSFDLLFRGLEITSGGQRIHRYGDLLASLEAKGMDP----EGFRGYLEVFKYGM 384

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PPHGG A G +R+   LLG  NVR    FP  ++    
Sbjct: 385 PPHGGFAIGAERLTQKLLGLPNVRYARAFPRDRHRLTP 422


>gi|284931588|gb|ADC31526.1| Asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 456

 Score =  160 bits (404), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 129/382 (33%), Gaps = 40/382 (10%)

Query: 9   CGDLGVSD---VGSFVRLSGWVHRVRPHGGIIFLDIRDHYG---ITQVVANPDSACFEIA 62
             +L +S     G  V L G    +R  G I F+   D      +  V    ++  F+  
Sbjct: 6   IKELLLSHSKREGEQVVLVGSFKSIRSSGAIGFIAFSDSTALEPVQIVFKKENTPNFDEI 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +    ++ + G+V +   +           E+ A KI +L  A+        ++ +  
Sbjct: 66  SKLPISSMILVKGVVRNTPGKKQP-------FEIQASKIVVLKEADPSYPLQ--KKAHGS 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
               +   L +R +  +  +  R+ + N+        +F+    P++T++  EGA +   
Sbjct: 117 EFLRENAHLRVRTNKFYVIMKIRSELANAFFEFFKNNDFLYVHAPLITSNDSEGAGESFE 176

Query: 183 PSRVNQGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               N  +++    +     Q+     A GF R F   P FR E   + +   EF+ ++ 
Sbjct: 177 VISPNDQNYFGKKASLTVSGQFAAEAYAQGFKRVFTFGPTFRAEKSHTSKHLSEFWMIEP 236

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL--------------RICYDDAIRR 285
           E+S ++ D +   +E  ++       +       +                I  D     
Sbjct: 237 EVSLMDLDKLTILIEQCVKHAIYYLFDYAKPELEWCNENLEPGLIDKLNNVINNDFPRVE 296

Query: 286 YGTDKPDLRNPI---IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           Y      L+  +   +   V +     + +   +       ++            +AF  
Sbjct: 297 YREVIEILKKAVAEGVEFEVKDIHFGMDLKSEHERYICEKVFKRPVFVINYPKDVKAFYM 356

Query: 343 RMNE-----WARSQGQPGLAYI 359
           ++N+      A     PG+  I
Sbjct: 357 KLNDDNQTVAATDLLAPGIGEI 378



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
             +D  ++ A   DL+  G  EI  G  R      +L     + I  E   N        
Sbjct: 358 LNDDNQTVAAT--DLLAPGIGEICGGSQREDSYNKLLTRCLELDIDPEF--NNLQWYLDL 413

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            + G     G   G +R++M + G  N+R+   FP 
Sbjct: 414 RKYGYYRSAGFGLGFERLLMYVTGCDNIRDAIPFPR 449


>gi|119719540|ref|YP_920035.1| aspartyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524660|gb|ABL78032.1| aspartyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 421

 Score =  160 bits (404), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 65/250 (26%), Positives = 114/250 (45%), Gaps = 16/250 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAK--SVRSEWVLCIDGLV 77
            + GWV  V+  G I F+++ D   +    VV   DS   + +K  +V+    + + G+ 
Sbjct: 6   VIEGWVSNVKILGKIAFIEVIDGLNLSPITVVVRKDSGSVDWSKVSAVKLGSAIRVKGVY 65

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEE-LPLPVFGEREYPESIRFKYRFLDLRRD 136
                + ++        E+ A +IEIL+   +  P+ V G+          YR+L LR  
Sbjct: 66  ---PEKVVSKKGR----EIHADEIEILAEPRDLPPIDVTGKTPASFEDYINYRYLALRLP 118

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +    + R+ I+N +R       F+E  TP +  +  EG             ++ A  Q
Sbjct: 119 RVRAAFLARSLIVNEIRSFFSERGFLEVHTPKIVKAGAEGGATLFEVDYFGVKAYLA--Q 176

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMEN 255
           +PQ YKQ+LM  G  R F+I P FR E   + R   E + LD+EM F++  +D+L  +  
Sbjct: 177 SPQLYKQMLMC-GVPRVFEIGPFFRAEKFSTTRHLNESWGLDVEMGFIKGMEDVLEVLSQ 235

Query: 256 VLRGVFEEFS 265
           ++  +  + +
Sbjct: 236 LVVHLSHKLN 245



 Score =  111 bits (278), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 49/158 (31%), Positives = 70/158 (44%), Gaps = 27/158 (17%)

Query: 422 QELGIINCNCFEFCWIMDF-P-----FYEWNEEEK-------KIDFAHNPFTMPQGGMES 468
           + L ++N   F   W  DF P       ++ EE+           +   PF + +     
Sbjct: 273 EALEVLNSLGFNLKWGEDFDPKAEKSLGDYLEEKGVQAYFIVDYPWESKPFYIMKKD--- 329

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
                    + + +DL   G E+ASGG R H  EV+ Q     G++       F     A
Sbjct: 330 -------EKRGYAFDLDIRGIEVASGGQREHRYEVLRQNLLEKGLNP----EDFSFYLEA 378

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           F+ GMPPHGG   GIDR+VM  LG +N+RE  LFP  +
Sbjct: 379 FKYGMPPHGGFGLGIDRLVMTFLGVQNIRETVLFPRDR 416


>gi|297748909|gb|ADI51455.1| Lysyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749789|gb|ADI52467.1| Lysyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 527

 Score =  159 bits (403), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 62/314 (19%), Positives = 123/314 (39%), Gaps = 40/314 (12%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-------------IAKSVR 66
            VR +G +   R  G   F  I D+    QV+ N D +                I K + 
Sbjct: 67  KVRFAGRLVLFRSMGKNSFGQILDNDAKIQVMFNRDFSAVAGLAADAGISPIKFIEKKLD 126

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +L ++G +             +G++ +  + + +L  +  + LP        + IR+
Sbjct: 127 LGDILGLEGYLFFT---------HSGELTVLVETVTLLCKSL-ISLPDKHAGLADKEIRY 176

Query: 127 KYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+ DL   + + K  + R+RI+  +R  M  ++F+E  TPIL            V + 
Sbjct: 177 RKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQTIYGGAEATPFVTTL 236

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   L  + +   + L+  G  R ++I   FR+E       P EF  ++   ++ +
Sbjct: 237 QALHAEMFLRISLEIALKKLLVGGMSRVYEIGKVFRNEGIDRTHNP-EFTMIEAYAAYWD 295

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRYGTDK 290
            +D++  +EN++  +    +NG T                   ++R+   ++I  YG   
Sbjct: 296 YNDVMKCVENLVEYIVRALNNGETQVQYSHLKSGPQVVDFKAPWIRMTMKESISVYGGVD 355

Query: 291 PDLRNPIIMHNVTE 304
            DL     +  + E
Sbjct: 356 VDLHADHELRKILE 369



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 46/125 (36%), Gaps = 10/125 (8%)

Query: 451 KIDFAHNPFTMPQGGME---SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM--- 504
           K+   H+    P        +L+  D   +   +++  C G E+ +     +        
Sbjct: 399 KLIAPHHITDHPLETTPLCKTLRSGDETLV--ERFESFCLGKELCNAYSELNDPLQQRKL 456

Query: 505 --LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              Q                     A   GMPP GG   GIDR+VM+L  A ++R+V  F
Sbjct: 457 LEEQMRKKALNPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMMLTDAASIRDVLFF 516

Query: 563 PMSQN 567
           P+ + 
Sbjct: 517 PVMRR 521


>gi|296436331|gb|ADH18505.1| lysyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296438190|gb|ADH20351.1| lysyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140691|gb|ADH97449.1| lysyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 526

 Score =  159 bits (403), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 62/314 (19%), Positives = 123/314 (39%), Gaps = 40/314 (12%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-------------IAKSVR 66
            VR +G +   R  G   F  I D+    QV+ N D +                I K + 
Sbjct: 66  KVRFAGRLVLFRSMGKNSFGQILDNDAKIQVMFNRDFSAVAGLAADAGISPIKFIEKKLD 125

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +L ++G +             +G++ +  + + +L  +  + LP        + IR+
Sbjct: 126 LGDILGLEGYLFFT---------HSGELTVLVETVTLLCKSL-ISLPDKHAGLADKEIRY 175

Query: 127 KYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+ DL   + + K  + R+RI+  +R  M  ++F+E  TPIL            V + 
Sbjct: 176 RKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQTIYGGAEATPFVTTL 235

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   L  + +   + L+  G  R ++I   FR+E       P EF  ++   ++ +
Sbjct: 236 QALHAEMFLRISLEIALKKLLVGGMSRVYEIGKVFRNEGIDRTHNP-EFTMIEAYAAYWD 294

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRYGTDK 290
            +D++  +EN++  +    +NG T                   ++R+   ++I  YG   
Sbjct: 295 YNDVMKCVENLVEYIVRALNNGETQVQYSHLKSGPRVVDFKAPWIRMTMKESISVYGGVD 354

Query: 291 PDLRNPIIMHNVTE 304
            DL     +  + E
Sbjct: 355 VDLHADHELRKILE 368



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 46/125 (36%), Gaps = 10/125 (8%)

Query: 451 KIDFAHNPFTMPQGGME---SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM--- 504
           K+   H+    P        +L+  D   +   +++  C G E+ +     +        
Sbjct: 398 KLIAPHHITDHPLETTPLCKTLRSGDETLV--ERFESFCLGKELCNAYSELNDPLQQRKL 455

Query: 505 --LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              Q                     A   GMPP GG   GIDR+VM+L  A ++R+V  F
Sbjct: 456 LEEQMRKKALNPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMMLTDAASIRDVLFF 515

Query: 563 PMSQN 567
           P+ + 
Sbjct: 516 PVMRR 520


>gi|1064982|pdb|1ASY|A Chain A, Class Ii Aminoacyl Transfer Rna Synthetases: Crystal
           Structure Of Yeast Aspartyl-Trna Synthetase Complexed
           With Trna Asp
 gi|1064984|pdb|1ASY|B Chain B, Class Ii Aminoacyl Transfer Rna Synthetases: Crystal
           Structure Of Yeast Aspartyl-Trna Synthetase Complexed
           With Trna Asp
 gi|1064986|pdb|1ASZ|A Chain A, The Active Site Of Yeast Aspartyl-Trna Synthetase:
           Structural And Functional Aspects Of The Aminoacylation
           Reaction
 gi|1064988|pdb|1ASZ|B Chain B, The Active Site Of Yeast Aspartyl-Trna Synthetase:
           Structural And Functional Aspects Of The Aminoacylation
           Reaction
          Length = 490

 Score =  159 bits (403), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 66/284 (23%), Positives = 109/284 (38%), Gaps = 25/284 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACF------EIAKSVR 66
             D    V     VH  R  G  + FL +R    + Q +   +          + A S+ 
Sbjct: 35  AKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLN 94

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ + G+V        +A +    +E+   KI  +S   E    +  +    E    
Sbjct: 95  LESIVLVRGIVKKVDEPIKSATV--QNLEIHITKIYTISETPEALPILLEDASRSEAEAE 152

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R  YR +DLR  T       +  +    R  +  + F E  TP L  + 
Sbjct: 153 AAGLPVVNLDTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLLGAP 212

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG       +     ++ A  Q+PQ  KQ L+ + F+R ++I P FR E+  + R   E
Sbjct: 213 SEGGSSVFEVTYFKGKAYLA--QSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRHMTE 270

Query: 234 FYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           F  LDMEM+F E   ++L+T+  +   +F E           +R
Sbjct: 271 FTGLDMEMAFEEHYHEVLDTLSELFVFIFSELPKRFAHEIELVR 314



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 46/119 (38%), Gaps = 12/119 (10%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K      PF TMP                +  YD    G EI SG  R H   ++ +   
Sbjct: 380 KFPLEIRPFYTMPDPANPKY---------SNSYDFFMRGEEILSGAQRIHDHALLQERMK 430

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             G+S E  +         F  G PPH G   G++R+VM  L  KN+R  SLFP     
Sbjct: 431 AHGLSPE--DPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRDPKR 487


>gi|226287399|gb|EEH42912.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 968

 Score =  159 bits (403), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 73/366 (19%), Positives = 136/366 (37%), Gaps = 28/366 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHY-GITQVVANP----DSACFEIAKSV 65
           + V  VG  V     VH VR     ++F+  R        V+A       +   + A+ +
Sbjct: 154 ITVDLVGQEVMFRARVHHVRRMSSKLVFIVFRQQIITFQGVLAEKAGQVSTFMIQWAEHI 213

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL---------SVAEELPLPVFG 116
           R   ++ + G +       +   I    +EL  +K+ ++         SV E        
Sbjct: 214 RVGSIVKVKGKLSKSLVPVVGCTIH--DVELDIEKLHVIVRREEPVPFSVYEAELTTREE 271

Query: 117 EREYP------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                      +  R   R LDLR D        ++ + N     + ++ FIE  TP L 
Sbjct: 272 HTHDGRRNHILDKTRLSNRILDLRTDASQSIFRIQSAVSNLFHSALDSQGFIEIHTPKLQ 331

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            S+ E        S  ++ +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R 
Sbjct: 332 GSATESGASVFEVSYFSRAAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRH 389

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             E+  LD+EM+  E   + L  +++VL+ +F+          + ++  +      +   
Sbjct: 390 LTEYTGLDIEMAIDEHYHEALEVIDSVLKEIFKGIYVRYRREVDIIKHQFPHEDLVWLDK 449

Query: 290 KPD--LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
            P     + I + N +      E    ++ L       +  +  +    +    D+    
Sbjct: 450 TPVILFSDGIKLLNDSGWRRDGEELPTNEDLGTRDEMRLGELIKEKYHTDYYILDKYPRV 509

Query: 348 ARSQGQ 353
           AR    
Sbjct: 510 ARPFYA 515



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 80/217 (36%), Gaps = 30/217 (13%)

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD-GDSCFFIAGDPLKFCSF 412
            G+ Y+ +R  E   +    P    + +  T  I     ++   DS +   G+ L     
Sbjct: 422 KGI-YVRYR-REVDIIKHQFPHEDLVWLDKTPVILFSDGIKLLNDSGWRRDGEELPTNED 479

Query: 413 AADARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
               R+ +   LG +I        +I+D           K      PF   +        
Sbjct: 480 LG-TRDEM--RLGELIKEKYHTDYYILD-----------KYPRVARPFYAMED------- 518

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
                     +D+   G EI SGG R H  +++ +   + GI    +E+        F+ 
Sbjct: 519 -PENPEFTNSFDIFVRGQEIVSGGQRIHDEKILEKRMRDAGIDPLTMED----YLEGFRW 573

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           G PPH G   G++R+VML+L   N+R  S+F      
Sbjct: 574 GAPPHAGAGIGLERLVMLILKLGNIRLASMFHRDPKS 610


>gi|296204891|ref|XP_002749522.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 2
           [Callithrix jacchus]
          Length = 401

 Score =  159 bits (403), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 75/326 (23%), Positives = 134/326 (41%), Gaps = 43/326 (13%)

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-- 117
           + A ++  E ++ ++G+V  R       +     +EL  QK+ ++S+AE        +  
Sbjct: 3   KFAANINKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKVYVISLAEPRLPLQLDDAV 60

Query: 118 -----------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                          +  R   R +DLR  T       ++ I +  R  +I + F+E  T
Sbjct: 61  RPEAEGEEEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQT 120

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P + +++ EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  
Sbjct: 121 PKIISAASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFCIGPVFRAEDSN 178

Query: 227 SDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF- 274
           + R   EF  LD+EM+F        ++I +TM  + +G+ E F       N       F 
Sbjct: 179 THRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFK 238

Query: 275 -----LRICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSV 320
                LR+ Y +A+           D+ DL  P    + ++ +    ++F +  K  L+V
Sbjct: 239 FLEPTLRLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAV 298

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNE 346
            P Y +          +     R  E
Sbjct: 299 RPFYTMPDPRNPKQSNSYDMFMRGEE 324



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 245 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 294

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 295 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 345

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 346 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 401


>gi|170083987|ref|XP_001873217.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650769|gb|EDR15009.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 538

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/276 (23%), Positives = 113/276 (40%), Gaps = 27/276 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQ--VVANPDSACFEIAKS- 64
             DL  S VG  V L   V   R  G  ++FL++R      Q  +   P+    ++ K  
Sbjct: 79  IADLS-SRVGEIVVLRARVQTSRAQGNKMVFLNLRQTTDTVQALLTVTPEKVSKQMVKWT 137

Query: 65  --VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS--------VAEELPLPV 114
             +  E ++ ++G V        +A++    +E+   +I ++S          E+   P 
Sbjct: 138 AGLADESIILVEGTVTKVQEPIKSASVS--DVEIHVHQIHLISGIDGRLPFSVEDAARPD 195

Query: 115 FGEREYP-------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
                            R   R +DLR  T       ++ I +  R  + +  FIE  +P
Sbjct: 196 TDLETSDVQYNRVLLETRLNNRIVDLRTQTSQAIFKIQSAIGDLFREYLSSHGFIEIHSP 255

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            L  ++ E              ++  L Q+PQ  KQ+ +A+ F+R ++I P FR ED  +
Sbjct: 256 KLQGAATESGASVFKVGYFKGNAY--LGQSPQLAKQMAIAADFERVYEIGPVFRAEDSNT 313

Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
            R   EF  LD+EM+  E   ++L  ++ +   +F 
Sbjct: 314 HRHLTEFIGLDLEMTIEEHYHEVLEVLDGLFLSIFR 349



 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 69/210 (32%), Gaps = 30/210 (14%)

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
            E G V    P          E        +  D       +         D      + 
Sbjct: 357 KEIGVVQKQFPADDFKWREGLEGTLRLTFREAVDILV----EDGVRREDLDDFSTENEKR 412

Query: 424 LG-IINCNCFEFCWIMD-FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           LG +I        +I+D FP                 +TM      +L         +  
Sbjct: 413 LGRLIKAKYDTDYYIIDKFPM-----------ALRPFYTMRDSEDPTL---------SNS 452

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           YD    G EI SG  R H   V+ +A  + G+  E ++         F+ G  PHGG   
Sbjct: 453 YDFFMRGEEILSGAQRIHDPAVLCEAMRSKGVDPESMKP----YVDGFRMGCNPHGGGGI 508

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G++R+VML L   N+R  SLFP      + 
Sbjct: 509 GLERVVMLFLKLNNIRRASLFPRDPKRLEP 538


>gi|169627648|ref|YP_001701297.1| lysyl-tRNA synthetase (LysS) [Mycobacterium abscessus ATCC 19977]
 gi|169239615|emb|CAM60643.1| lysyl-trna synthetase (LysS) [Mycobacterium abscessus]
          Length = 500

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/273 (21%), Positives = 115/273 (42%), Gaps = 20/273 (7%)

Query: 5   RTHSCGDLGVSDV--------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS   +  +          G  V +SG V   R  G + F  +++  G +        
Sbjct: 38  RTHSLKQIRDAYTDLETDTSTGDQVGVSGRVIFSRNTGKLCFATLQEGDGTS---LQVMI 94

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +   + +   ++W   +D G ++    E I++    G++ + A + ++ S +        
Sbjct: 95  SLAGVGEQSLADWKTDVDLGDIVFVHGEVISSR--RGELSVMADRWQMASKSLRPLP--V 150

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL  R    +   +R  ++ ++R  M   +F+E  TPIL   + 
Sbjct: 151 AHKEMSEETRVRQRYVDLIVRPEARQIARQRVAVMRAIRDAMHRRDFLELETPILQTLAG 210

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  GFD+ F++   FR+E   S   P E
Sbjct: 211 GAAARPFITHSNALDIDLY-LRIAPELFLKKALVGGFDKIFELNRVFRNEGADSTHSP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           F  L+   ++   D     +  +++ V ++   
Sbjct: 269 FVMLETYETYGTYDTAATMIRELIQEVADDAMG 301



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 48/139 (34%), Gaps = 26/139 (18%)

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              +   ++ DFP               +P T     +              ++DL   G
Sbjct: 378 DKMYAPTFVRDFP------------VETSPLTRQHRSIA---------GVTEKWDLYVRG 416

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGID 544
           FE+A+G        +  + F +        ++           A +  MPP  G   GID
Sbjct: 417 FELATGYSELIDPVIQRERFVDQARLAAAGDDEAMSLDEDFLGAMEHAMPPAAGTGMGID 476

Query: 545 RIVMLLLGAKNVREVSLFP 563
           R++M L G   +RE  LFP
Sbjct: 477 RLLMALTGLG-IRETILFP 494


>gi|6323011|ref|NP_013083.1| Dps1p [Saccharomyces cerevisiae S288c]
 gi|135100|sp|P04802|SYDC_YEAST RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3370|emb|CAA27269.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|3411|emb|CAA29865.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|1297012|emb|CAA66172.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|1360191|emb|CAA97464.1| DPS1 [Saccharomyces cerevisiae]
 gi|151941152|gb|EDN59530.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
 gi|190406028|gb|EDV09295.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|207343237|gb|EDZ70762.1| YLL018Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256272328|gb|EEU07312.1| Dps1p [Saccharomyces cerevisiae JAY291]
 gi|259147973|emb|CAY81222.1| Dps1p [Saccharomyces cerevisiae EC1118]
 gi|285813406|tpg|DAA09302.1| TPA: Dps1p [Saccharomyces cerevisiae S288c]
 gi|323303944|gb|EGA57724.1| Dps1p [Saccharomyces cerevisiae FostersB]
 gi|323332606|gb|EGA74013.1| Dps1p [Saccharomyces cerevisiae AWRI796]
 gi|323336545|gb|EGA77811.1| Dps1p [Saccharomyces cerevisiae Vin13]
 gi|323347600|gb|EGA81867.1| Dps1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 557

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 66/284 (23%), Positives = 109/284 (38%), Gaps = 25/284 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACF------EIAKSVR 66
             D    V     VH  R  G  + FL +R    + Q +   +          + A S+ 
Sbjct: 102 AKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLN 161

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ + G+V        +A +    +E+   KI  +S   E    +  +    E    
Sbjct: 162 LESIVLVRGIVKKVDEPIKSATV--QNLEIHITKIYTISETPEALPILLEDASRSEAEAE 219

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R  YR +DLR  T       +  +    R  +  + F E  TP L  + 
Sbjct: 220 AAGLPVVNLDTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLLGAP 279

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG       +     ++ A  Q+PQ  KQ L+ + F+R ++I P FR E+  + R   E
Sbjct: 280 SEGGSSVFEVTYFKGKAYLA--QSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRHMTE 337

Query: 234 FYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           F  LDMEM+F E   ++L+T+  +   +F E           +R
Sbjct: 338 FTGLDMEMAFEEHYHEVLDTLSELFVFIFSELPKRFAHEIELVR 381



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 46/119 (38%), Gaps = 12/119 (10%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K      PF TMP                +  YD    G EI SG  R H   ++ +   
Sbjct: 447 KFPLEIRPFYTMPDPANPKY---------SNSYDFFMRGEEILSGAQRIHDHALLQERMK 497

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             G+S E  +         F  G PPH G   G++R+VM  L  KN+R  SLFP     
Sbjct: 498 AHGLSPE--DPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRDPKR 554


>gi|323353881|gb|EGA85734.1| Dps1p [Saccharomyces cerevisiae VL3]
          Length = 557

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 66/284 (23%), Positives = 109/284 (38%), Gaps = 25/284 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACF------EIAKSVR 66
             D    V     VH  R  G  + FL +R    + Q +   +          + A S+ 
Sbjct: 102 AKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLN 161

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ + G+V        +A +    +E+   KI  +S   E    +  +    E    
Sbjct: 162 LESIVLVRGIVKKVDEPIKSATV--QNLEIHITKIYTISETPEALPILLEDASRSEAEAE 219

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R  YR +DLR  T       +  +    R  +  + F E  TP L  + 
Sbjct: 220 AAGLPVVNLDTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLLGAP 279

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG       +     ++ A  Q+PQ  KQ L+ + F+R ++I P FR E+  + R   E
Sbjct: 280 SEGGSSVFEVTYFKGKAYLA--QSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRHMTE 337

Query: 234 FYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           F  LDMEM+F E   ++L+T+  +   +F E           +R
Sbjct: 338 FTGLDMEMAFEEHYHEVLDTLSELFVFIFSELPKRFAHEIELVR 381



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 46/119 (38%), Gaps = 12/119 (10%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K      PF TMP                +  YD    G EI SG  R H   ++ +   
Sbjct: 447 KFPLEIRPFYTMPDPANPKY---------SNSYDFFMRGEEILSGAQRIHDHALLQERMK 497

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             G+S E  +         F  G PPH G   G++R+VM  L  KN+R  SLFP     
Sbjct: 498 AHGLSPE--DPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRDPKR 554


>gi|166154123|ref|YP_001654241.1| lysyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166154998|ref|YP_001653253.1| lysyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|301335361|ref|ZP_07223605.1| lysyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|226710884|sp|B0B907|SYK_CHLT2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710885|sp|B0BAN6|SYK_CHLTB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|165930111|emb|CAP03594.1| lysyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165930986|emb|CAP06548.1| lysyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 526

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/314 (19%), Positives = 123/314 (39%), Gaps = 40/314 (12%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-------------IAKSVR 66
            VR +G +   R  G   F  I D+    QV+ N D +                I K + 
Sbjct: 66  KVRFAGRLVLFRSMGKNAFGQILDNDAKIQVMFNRDFSAVAGLAADAGISPIKFIEKKLD 125

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +L ++G +             +G++ +  + + +L  +  + LP        + IR+
Sbjct: 126 LGDILGLEGYLFFT---------HSGELTVLVETVTLLCKSL-ISLPDKHAGLADKEIRY 175

Query: 127 KYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+ DL   + + K  + R+RI+  +R  M  ++F+E  TPIL            V + 
Sbjct: 176 RKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQTVYGGAEATPFVTTL 235

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   L  + +   + L+  G  R ++I   FR+E       P EF  ++   ++ +
Sbjct: 236 QALHAEMFLRISLEIALKKLLVGGMSRVYEIGKVFRNEGIDRTHNP-EFTMIEAYAAYWD 294

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRYGTDK 290
            +D++  +EN++  +    +NG T                   ++R+   ++I  YG   
Sbjct: 295 YNDVMKCVENLVEYIVRALNNGETQVQYSHLKSGPQVVDFKAPWIRMTMKESISVYGGVD 354

Query: 291 PDLRNPIIMHNVTE 304
            DL     +  + E
Sbjct: 355 VDLHADHELRKILE 368



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 46/125 (36%), Gaps = 10/125 (8%)

Query: 451 KIDFAHNPFTMPQGGME---SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM--- 504
           K+   H+    P        +L+  D   +   +++  C G E+ +     +        
Sbjct: 398 KLIAPHHITDHPLETTPLCKTLRSGDETLV--ERFESFCLGKELCNAYSELNDPLQQRKL 455

Query: 505 --LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              Q                     A   GMPP GG   GIDR+VM+L  A ++R+V  F
Sbjct: 456 LEEQMRKKALNPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMMLTDAASIRDVLFF 515

Query: 563 PMSQN 567
           P+ + 
Sbjct: 516 PVMRR 520


>gi|269986979|gb|EEZ93255.1| lysyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum ARMAN-4]
          Length = 477

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 17/251 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWV 70
               G   +++G +   R HG I F+D++D  G  QV  +    D    + A+ + +  +
Sbjct: 42  EKLEGKDTKVAGRIIAKRDHGKIKFIDLQDEEGSIQVYFSEKHADKKTVKTAEELDTGDI 101

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++            T +I + A+ I ILS A  LP+P           R++ R+
Sbjct: 102 IGVTGTII---------KTKTNEISIDAKDITILSKAL-LPMPSRWYGLEDTEKRYRKRY 151

Query: 131 LDLRRDTLHKNIVKRTRIINS-MRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           LD   +      +K+  II S +R  M    +IE   PIL        A+ F+       
Sbjct: 152 LDFIINRESLEKIKKGNIILSKIREIMEKNKYIEVIVPILQPIPGGANAKPFITHYNSLD 211

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             FY L  A ++Y + ++  GF+R F I+  FR+E   +   P EF  ++   ++ +   
Sbjct: 212 RDFY-LKIASERYLKRMLVGGFERVFDISKNFRNEGVDTRHNP-EFMMMEAYQAYGDLSS 269

Query: 249 ILNTMENVLRG 259
           +L   E +++ 
Sbjct: 270 MLQLTEEIVKE 280



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           I+ N     ++  FP  E +   KKI+                  +D   +  ++++L  
Sbjct: 350 ISDNIVNPVFVTKFPI-EVSPLAKKIE------------------SDPRFV--YRFELYI 388

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAG 542
            G EIA+     +     +  F      K       +        +   GMPP GG+  G
Sbjct: 389 AGMEIANAFSELNDPIDQISRFEEEAKRKNRGIDETQEFDKDFIESMGYGMPPAGGVGIG 448

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR+ M+   +K+++EV  FP
Sbjct: 449 IDRLQMIGTDSKSIKEVIPFP 469


>gi|227502073|ref|ZP_03932122.1| lysine tRNA ligase [Corynebacterium accolens ATCC 49725]
 gi|227077228|gb|EEI15191.1| lysine tRNA ligase [Corynebacterium accolens ATCC 49725]
          Length = 525

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 63/336 (18%), Positives = 133/336 (39%), Gaps = 21/336 (6%)

Query: 19  SFVR--LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           + V   ++G +  +R  G + F  ++D  G         +   +  + + +       G 
Sbjct: 75  TEVTHAIAGRLIFMRNTGKLCFATLQDGDGTQMQAMLSQAKVGK--ERLDAWKSDVDLGD 132

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-R 135
            +S S   + +    G++ + A++  + + +       F   +  E  R + R+ DL  R
Sbjct: 133 FISVSGHVVASR--RGELSIMAEEWTMAAKSLRPLPVSFA--DMAEDTRVRQRYNDLIIR 188

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
           +   KN + R +++ ++R  + +++F+E  TP+L A      AR F+  S       Y L
Sbjct: 189 EEARKNAMVRVKVMRALRNYLESQDFVEIETPMLQALHGGAAARPFITHSNALDIDLY-L 247

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y +  +  G DR F+I   FR+E       P EF  L+   ++ + +D      
Sbjct: 248 RIAPELYLKRAVVGGIDRVFEINRNFRNEGVDRSHSP-EFAMLETYAAWGDYNDCARMTR 306

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN--VTEHFVHSEFR 312
             ++ V  E     TV+     +         G   P++     ++     +     E  
Sbjct: 307 ESIQSVAREVFGSTTVT-----LADGTDFDFGGDQWPEIEMYPSLNEALQRKFPGQPEVT 361

Query: 313 VFSKILSVNPGYEVWA--IPAKGGGGNRAFCDRMNE 346
           + + + ++    +V    +P   G G+    + + E
Sbjct: 362 IDTDVETLKGIAKVIGLDVPKGEGWGHGKLVEEIWE 397



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 5/93 (5%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 ++DL   GFE+A+G        V    F +        +            A +
Sbjct: 427 EPGVTEKWDLYVRGFELATGYSELVDPVVQRARFEDQARLAAGGDEEAMVLDEDFLAAME 486

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP  G   G+DR++M L G   +RE  LFP
Sbjct: 487 QGMPPTAGTGMGMDRLLMALTGLG-IRETVLFP 518


>gi|302672135|ref|YP_003832095.1| asparaginyl-tRNA synthetase AsnS [Butyrivibrio proteoclasticus
           B316]
 gi|302396608|gb|ADL35513.1| asparaginyl-tRNA synthetase AsnS [Butyrivibrio proteoclasticus
           B316]
          Length = 461

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 96/292 (32%), Gaps = 32/292 (10%)

Query: 5   RTHSCGDL---GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACF 59
           RT    +L           V +  WV   R      FL++ D       QVV + +   F
Sbjct: 2   RTK-IKELFRNTSEYASKEVTICAWVRTNRAQAQFGFLNVNDGSFFENLQVVYDQELNNF 60

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +    +R    + + G ++                E+ A  +E+L        P+  +R 
Sbjct: 61  DDISKIRVGASVKVTGTLVLTPDNKQP-------FEVKATAVELLGDC-PENYPIQPKRH 112

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             E +R     L  R +        R+    ++        ++   TP++T +  EG+  
Sbjct: 113 TREYLR-TVAHLRPRTNLFSAVFRIRSVAAMAVHTYFQDRGYLYVHTPLITGADCEGSDQ 171

Query: 180 FLVPSRVNQGSFY-----------------ALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
               +  N                      +      Q +    A  F   +   P FR 
Sbjct: 172 MFKITTFNMNDLPKTEDGKVDFSKDLFGKQSFITGSGQLQGETFAMAFGDIYTFGPTFRT 231

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           E+  +     EF+ ++ EM+F +   +++  E +L+ V +   +      +F
Sbjct: 232 ENSNTQTHANEFWMIEPEMAFCDLQGLMDVEEEMLKFVVKYVCDKCPEEIDF 283



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 60/152 (39%), Gaps = 25/152 (16%)

Query: 420 IAQELGIINCNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           IA+E        F    ++ D+P     ++ K      NP        +++   DL    
Sbjct: 333 IAKEHEKYIVEYFNGPVFVTDWP-----KDIKAYYMKVNP------DNKTVAAVDL---- 377

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
                LV    E+  G  R    + +++    +G+ KE ++          + G   H G
Sbjct: 378 -----LVPQAGELMGGSQREENLDKLIERMDEMGVDKEGID----WYLDTRRYGGCIHSG 428

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              G +R++M L G +N+R+V  +P +   C+
Sbjct: 429 FGMGFERLIMYLTGVENIRDVIPYPRTPKNCE 460


>gi|303312585|ref|XP_003066304.1| asparaginyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240105966|gb|EER24159.1| asparaginyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320033593|gb|EFW15540.1| asparaginyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 578

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/302 (20%), Positives = 114/302 (37%), Gaps = 25/302 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VHR+R    +IF+ + D YG  Q V   D      A ++  E  + + G +
Sbjct: 153 GTRVRVLGRVHRLRSQKDVIFVTLSDGYGFLQCVFTGDLVKTYDAMTLTLETSIAVHGEM 212

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRR 135
            +   +    +      EL A    ++  A  ++  +      +      +  R L LR 
Sbjct: 213 CAVPPKQHAPDNR----ELHADFFTVIGRAAGDKEAITTRVAPDADPQTLYDNRHLVLRG 268

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +     +  R  +I + R     +  +E + P +  +  EG           + ++  L 
Sbjct: 269 EIASSVMKVRAAVIRAFRSAFEEQRMLEVTPPAMVQTQVEGGSTLFSFDYYGEPAY--LT 326

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+ Q Y +  + S     F I P FR E   + R   E+  ++ E+ F+  DD+L+ +E 
Sbjct: 327 QSSQLYLETCLPS-LGDVFCICPSFRAEKSLTRRHLSEYTHIEAELDFITFDDLLDHLEV 385

Query: 256 VLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPIIM 299
           ++  V +                 +    S  F R+ Y +AI             NP   
Sbjct: 386 IICRVLDLVLADPQIAGYIKSLNPDFKPPSRPFKRMKYAEAIDWLREHNIPNEEGNPHTF 445

Query: 300 HN 301
            +
Sbjct: 446 GD 447



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                   F M +   E L+  + + +      L+    EI  G +R    + ++ A+++
Sbjct: 469 HFPVEIKAFYMRK-DPEDLRVTESVDV------LMPGVGEIVGGSMRMEDWDELMGAYAS 521

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+        +       + G  PHGG   G++R +  + G   VRE  L+P     C 
Sbjct: 522 RGMDPTP----YYWYTDQRKYGTSPHGGYGLGVERFLAWMCGRYTVRECCLYPRFTGRCT 577

Query: 571 L 571
            
Sbjct: 578 P 578


>gi|312373072|gb|EFR20897.1| hypothetical protein AND_18332 [Anopheles darlingi]
          Length = 549

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/349 (18%), Positives = 127/349 (36%), Gaps = 23/349 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G ++ G  +R+ GW+HR+R  G  ++F+ +RD  G  Q V          A  + +E  +
Sbjct: 121 GAANRGVRIRVYGWIHRLRRQGKGLMFVTLRDGTGFLQCVLTDTLCQTYNALVLSTESSV 180

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +    A         G  EL     E++ +A           E    ++   R +
Sbjct: 181 QLFGTLNEVPAG----KTAPGGHELKVDYWELIGLAPAGGADAILNEEAHPDVQLDNRHI 236

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R  ++ + R       + E + P L  +  EG           + ++
Sbjct: 237 MIRGENTSKILKMRDVVMQAFRSHYFDRGYTEVTPPTLVQTQVEGGSTLFKLDYFGEEAY 296

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  +       F +A  +R E  R+ R   E+  ++ E  F+  +++LN
Sbjct: 297 --LTQSSQLYLETCIP-ALGDVFCVAQSYRAEQSRTRRHLAEYSHIEGECPFITFEELLN 353

Query: 252 TMENV------------LRGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
            +E++               + +E +         F R+ Y DAI     +     +   
Sbjct: 354 RLEDLVVDVVDRVLKSPWGYMVQELNPGFVPPKRPFRRMNYADAIVWLKENNVTKEDG-T 412

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
            +   E    +  R  +  ++       +    K     +   D R+ E
Sbjct: 413 FYEFGEDIPEAPERKMTDTINEPIMLCRFPAEIKSFYMAKCEDDPRLTE 461



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      + +       L+ N  EI  G +R+   + +L+ +  
Sbjct: 440 RFPAEIKSFYMAKCEDDPRLTESVDA-------LLPNVGEIVGGSMRSWKYDELLEGYKR 492

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI  +     +         G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 493 EGIDPKP----YYWYVDQRVYGTQPHGGYGLGLERFLCWLLNRYHIREVCLYPR 542


>gi|121637548|ref|YP_977771.1| lysyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224990023|ref|YP_002644710.1| lysyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|296439664|sp|A1KJ57|LYSX_MYCBP RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|296439665|sp|C1ANR3|LYSX_MYCBT RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|121493195|emb|CAL71666.1| Possible lysyl-tRNA synthetase 2 lysX [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224773136|dbj|BAH25942.1| lysyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
          Length = 1172

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+ +        A   
Sbjct: 711 SHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAAEF 770

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  +     +   TG   L      ++      PLP   +       R
Sbjct: 771 NAATDL---GDLVEMTGHMGASK--TGTPSLIVSGWRLIGKCLR-PLPNKWKGLLDPEAR 824

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR F+  
Sbjct: 825 VRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTH 884

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 885 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 942

Query: 244 VEQDDILNTMENVL 257
               + ++    ++
Sbjct: 943 AGYLEWIDGCRELI 956



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 32/192 (16%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNCFEFC 435
            +   +EA+  R+D   G +      D    P +    A      + + L  + C   +  
Sbjct: 1000 HDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLELYEHL--VECRTEQPT 1057

Query: 436  WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            + +DFP             + +P T P                A ++DLV  G E+ +  
Sbjct: 1058 FYIDFP------------TSVSPLTRPHRS---------KRGVAERWDLVAWGIELGTAY 1096

Query: 496  IRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                      +      +                 +A +  MPP GG+  GIDR+VML+ 
Sbjct: 1097 SELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLIT 1156

Query: 552  GAKNVREVSLFP 563
            G  ++RE   FP
Sbjct: 1157 GR-SIRETLPFP 1167


>gi|218191378|gb|EEC73805.1| hypothetical protein OsI_08509 [Oryza sativa Indica Group]
          Length = 549

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 70/343 (20%), Positives = 122/343 (35%), Gaps = 31/343 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVV------ANPDSACFEI 61
            G L  +  G  V + G    +RP    + F+ +R+     Q V      A   +     
Sbjct: 89  VGGLDEAAAGRSVLIRGAAQAIRPVSKKMAFVVLRESMSTVQCVLVASADAGVSTQMVRF 148

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-------------- 107
           A S+  E ++ ++G+V             T Q+E+  +KI  ++ A              
Sbjct: 149 ATSLSKESIVDVEGVVSLPKEPL---KATTQQVEIQVRKIYCINRAIPTLPINLEDASRS 205

Query: 108 ----EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
               E+            +  R  YR +DLR          + ++ N  R   +++NF+ 
Sbjct: 206 EAEIEKAEQAGEKLVRVGQDTRLNYRAIDLRTPANQAIFRIQCQVENKFREYFLSKNFVG 265

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             +P L A S EG            G    L Q+PQ YKQ+ +  GF+R F++ P FR E
Sbjct: 266 IHSPKLIAGSSEGGAAVFKLQYN--GQPACLAQSPQLYKQMAICGGFERVFEVGPVFRAE 323

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           +  + R   EF  LD EM   E   ++ + ++ +   +F+  +         +   Y   
Sbjct: 324 NSNTHRHLCEFVGLDAEMEIKEHYFEVCDIIDGLFVAIFKHLNENCKKELETINRQYPFE 383

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
             +Y      L     +  + E     E        +      
Sbjct: 384 PLKYLEKTLKLTYEEGIQMLKEAGTEIEPMGDLNTEAEKKLGR 426



 Score =  107 bits (268), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 73/214 (34%), Gaps = 23/214 (10%)

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           GL    ++         +  + +       + +   L +   +    +     +      
Sbjct: 356 GLFVAIFKHLNENCKKELETINRQYPFEPLKYLEKTLKLTYEEGIQMLKEAGTEIEP-MG 414

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
           D      ++LG +    +   +   F  Y       +   A  PF               
Sbjct: 415 DLNTEAEKKLGRLVKEKYGTEF---FILY-------RYPLAVRPFYTMPCYD-------- 456

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
               +  +D+   G EI SG  R H+ E++ +  +  GI    + +       +F  G P
Sbjct: 457 NPAYSNSFDVFIRGEEIISGAQRIHLPELLTKRATECGIDASTISS----YIESFSYGAP 512

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PHGG   G++R+VML     N+R+ SLFP     
Sbjct: 513 PHGGFGVGLERVVMLFCALNNIRKTSLFPRDPQR 546


>gi|254478049|ref|ZP_05091433.1| tRNA synthetase class II (D, K and N) subfamily protein
           [Carboxydibrachium pacificum DSM 12653]
 gi|214036053|gb|EEB76743.1| tRNA synthetase class II (D, K and N) subfamily protein
           [Carboxydibrachium pacificum DSM 12653]
          Length = 507

 Score =  159 bits (403), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 97/481 (20%), Positives = 176/481 (36%), Gaps = 59/481 (12%)

Query: 96  LSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155
           +  ++  +LS A              E       +LD       +   K   + +S+R  
Sbjct: 69  IKVKECNVLSTACR-----------DEETTLLRNYLD---RYNVEFFRKINSLEDSVRDF 114

Query: 156 MIAENFIECSTPILTASSPE-GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           +  E FIE   PIL     E G +++ + + + + + Y L Q+P     +   +G +R F
Sbjct: 115 LKKEKFIELRNPILWVPVQEYGTKEWRIQNPITKETPYILLQSPNILNLISTVAGIERNF 174

Query: 215 QIAPCFRDEDPRS-DRL--PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           Q  PCFR  +  S  R     EF QL +  +F+  ++ +  +E++   + ++  +     
Sbjct: 175 QFHPCFRLAEENSLARNDSLIEFTQLAITAAFLTNEEAMRLIEDMFFYIIKKHFDIEI-E 233

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
             F  + Y ++++ Y TD PDLR     +  +      ++        VN   E + I  
Sbjct: 234 KPFEILDYHESMKLYSTDHPDLRF-RKFYRPSFIINGYKYTGLIIPAYVNKKIEEFLINK 292

Query: 332 ----KGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAI 387
                    N    D      +  G     Y+     E+  +  +G +    + + T+  
Sbjct: 293 TYQQDRENSNFFSYDENKTLKQKLGDIKADYLIDEWFENNEIEKVGYILLLPSSIETDIF 352

Query: 388 RVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNE 447
             R+                 +                      ++FCWI ++PF   NE
Sbjct: 353 YNRIS-------------KTLYPKLFGKV-------------EKYKFCWIKNYPFI--NE 384

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
            E      H+              ND   I     DLV NG EIASGG + + +E  +++
Sbjct: 385 LEYDSQSLHDAIGQNIFTKRIRNSNDTEGI-----DLVLNGIEIASGGQKVNTAEEFIES 439

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              + I     +  +    +  + G PP   I  G +R ++ L   K + +V +FP  Q 
Sbjct: 440 LELLKIK--DKQKNYDYFIKVLKTGAPPLFSIGIGWERTLLALFETKTISDVMVFPKDQF 497

Query: 568 F 568
            
Sbjct: 498 G 498


>gi|119192776|ref|XP_001246994.1| asparaginyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
          Length = 578

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/302 (20%), Positives = 114/302 (37%), Gaps = 25/302 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VHR+R    +IF+ + D YG  Q V   D      A ++  E  + + G +
Sbjct: 153 GTRVRVLGRVHRLRSQKDVIFVTLSDGYGFLQCVFTGDLVKTYDAMTLTLETSIAVHGEM 212

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRR 135
            +   +    +      EL A    ++  A  ++  +      +      +  R L LR 
Sbjct: 213 CAVPPKQHAPDNR----ELHADFFTVIGRAAGDKEAITTRVAPDADPQTLYDNRHLVLRG 268

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +     +  R  +I + R     +  +E + P +  +  EG           + ++  L 
Sbjct: 269 EIASSVMKVRAAVIRAFRSAFEEQRMLEVTPPAMVQTQVEGGSTLFSFDYYGEPAY--LT 326

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+ Q Y +  + S     F I P FR E   + R   E+  ++ E+ F+  DD+L+ +E 
Sbjct: 327 QSSQLYLETCLPS-LGDVFCICPSFRAEKSLTRRHLSEYTHIEAELDFITFDDLLDHLEV 385

Query: 256 VLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPIIM 299
           ++  V +                 +    S  F R+ Y +AI             NP   
Sbjct: 386 IICRVLDLVLADPQIAGYIKSLNPDFKPPSRPFKRMKYAEAIDWLREHNIPNEEGNPHTF 445

Query: 300 HN 301
            +
Sbjct: 446 GD 447



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                   F M +   E L+  + + +      L+    EI  G +R    + ++ A+++
Sbjct: 469 HFPVEIKAFYMRK-DPEDLRVTESVDV------LMPGVGEIVGGSMRMEDWDELMGAYAS 521

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+        +       + G  PHGG   G++R +  + G   VRE  L+P     C 
Sbjct: 522 RGMDPTP----YYWYTDQRKYGTSPHGGYGLGVERFLAWMCGRYTVRECCLYPRFTGRCT 577

Query: 571 L 571
            
Sbjct: 578 P 578


>gi|313232355|emb|CBY09464.1| unnamed protein product [Oikopleura dioica]
          Length = 554

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/289 (20%), Positives = 110/289 (38%), Gaps = 21/289 (7%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            S + ++ W+HR+R  G  ++FL +RD  G  Q V          A  ++ E  + + G 
Sbjct: 131 DSRITVNAWIHRIRRQGNNLMFLVVRDGTGYLQCVLTDKLCQTYDALVLQPEATVELHGK 190

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           + +            G  EL     ++++ A    +     +E      F  R L +R +
Sbjct: 191 LEAVPEG----KNAEGGHELKVDFWKMIANAPPGGVENVVNKEADPDTLFDNRHLVIRGE 246

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
              K +  R+ ++ + R    A  + E + P L  +  EG           + ++  L Q
Sbjct: 247 KTSKILKIRSHLMQAFREHYFARGYHEVTPPCLVQTMCEGGSTLFKFDYFGEEAY--LTQ 304

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  M       F +A  +R E  R+ R   E+  ++ E  F+  + +L+ +E++
Sbjct: 305 SSQLYLETCMP-ALGDVFCMAESYRAEKSRTRRHLSEYTHVEAECPFITFEQLLDRIEDL 363

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPD 292
           L  V +                N       F+R+ Y DAI         
Sbjct: 364 LVDVIDRLLKSPAGQYVYDLHPNFVPPKKPFMRMDYKDAITYLKEHDIK 412



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F MP+   +      +         L+ N  E+  G +R    + ++  +  
Sbjct: 445 RFPAEIKSFYMPRCEDDERVTESVDV-------LIPNVGEVIGGSMRMWDYDTLMSKYKE 497

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI  +     +       + G  PHGG   G++R++  L    ++R+V L+P     C 
Sbjct: 498 EGIDPKD----YYWYTDQRKYGSCPHGGYGLGLERMLTWLCDQYHIRDVCLYPRYTGRCK 553

Query: 571 L 571
            
Sbjct: 554 P 554


>gi|152964545|ref|YP_001360329.1| lysyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189082961|sp|A6W5H6|SYK_KINRD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|151359062|gb|ABS02065.1| lysyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 500

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/273 (21%), Positives = 113/273 (41%), Gaps = 20/273 (7%)

Query: 5   RTHSCGDLGVS----DVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD 55
           RT S  DL       + G      V ++G V  +R  G + F  +++  G   QV+ + D
Sbjct: 40  RTDSLADLRERYAHLEAGEETTDQVGVTGRVVFLRGTGKLAFATLQEGDGTRLQVMVSRD 99

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               +   + +S+  L   G ++      I++    G++ + A    + S +      + 
Sbjct: 100 GVGEDALAAWKSDVDL---GDIVFVHGNVISSR--RGELSVLADSWRMASKSLRPLPVL- 153

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R++DL      +  V+ R+ ++ ++R  +    F+E  TP+L     
Sbjct: 154 -HKELSEETRVRQRYVDLIVREAARTNVRARSNVVRALRRTLEDRGFLEVETPMLQTLHG 212

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+  S       Y L  AP+ + +  +  G +R F+I   FR+E   S   P E
Sbjct: 213 GASARPFVTRSNAFDTELY-LRIAPELFLKRCVVGGIERVFEINRNFRNEGADSTHSP-E 270

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           F  L+   ++ + D I      +++    E   
Sbjct: 271 FAMLETYQAWGDYDSIGELTRALVQNAATEAFG 303



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 55/161 (34%), Gaps = 28/161 (17%)

Query: 407 LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
                        + +    I  +     ++ DFP      E   +   H          
Sbjct: 359 DTVRWTHGKLVEELWEH--RIADSLHSPTFVRDFPV-----ETSPLVRGHR--------- 402

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF---- 522
                   L     ++DL   GFE+A+G        V  + F       ++ ++      
Sbjct: 403 -------ELPGVVEKWDLYVRGFELATGYSELVDPVVQRERFVEQARLADLGDDEAMRID 455

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               RA + GMPP GG+  GIDR++M L G   +RE   FP
Sbjct: 456 EDFLRAQEHGMPPTGGMGMGIDRLLMALTGLG-IRETITFP 495


>gi|242776859|ref|XP_002478916.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218722535|gb|EED21953.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 578

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 66/299 (22%), Positives = 112/299 (37%), Gaps = 23/299 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             + G+ VR+ G VHR+R    +IF+ + D YG  Q +   D        ++  E  + I
Sbjct: 149 SDEPGTRVRVLGRVHRLRSQKDVIFITLYDGYGYLQCIMTGDMVKTYDMMTLTLETSIAI 208

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFL 131
            G + +   +    N      EL A   +I+  A  ++  +      +      +  R L
Sbjct: 209 HGEMRAVPPKQHAPNDR----ELHADYFKIIGKAAGDKEAITSRVAPDADPQTLYDNRHL 264

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR +T    +  R   + + R    A   +E + P +  +  EG           + ++
Sbjct: 265 VLRGETSSSVMKVRAATLRAFRRTFEATRMLEVTPPSMVQTQVEGGSTLFSFDYYGEPAY 324

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  +AS     F I P FR E   + R   E+  ++ E+ F+  DD+L 
Sbjct: 325 --LTQSSQLYLETCLAS-LGDVFCICPSFRAEKSLTRRHLSEYTHIEAELDFITFDDLLE 381

Query: 252 TMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
            +E V+  V  E                +    S  F R+ Y DAI             
Sbjct: 382 HLEEVISTVIGELLADEQTAKLIKDLNPDFKVPSRPFKRMRYSDAIDWLREHNIPNEEG 440



 Score = 63.9 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 41/122 (33%), Gaps = 13/122 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M +         D    ++   D++  G  EI  G  R    + ++ A+ 
Sbjct: 469 HFPAEIKAFYMKKD------PQDPRVTESV--DVLMPGVGEIVGGSCRIDDWDELIAAYK 520

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
              +        +       + G  PHGG   G++R +  + G   VRE  L+P     C
Sbjct: 521 REEMDPSP----YYWYTDQRKYGTSPHGGYGLGLERFLAWICGRYTVRECCLYPRFTGRC 576

Query: 570 DL 571
             
Sbjct: 577 TP 578


>gi|323345803|gb|EGA80172.1| Krs1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 376

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 87/206 (42%), Gaps = 9/206 (4%)

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           ++ ++G V      T       G++ +   ++++L+      LP        +  R++ R
Sbjct: 1   IVGVEGYV----GRTQPKKGGEGEVSVFVSRVQLLTPCL-HMLPADHFGFKDQETRYRKR 55

Query: 130 FLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVN 187
           +LDL  +       + R+ II  +R  +    FIE  TP++   +    A+ F+      
Sbjct: 56  YLDLIMNKDARNRFITRSEIIRYIRRFLDQRKFIEVETPMMNVIAGGATAKPFITHHNDL 115

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y +  AP+ + + L+  G DR ++I   FR+E       P EF   +   ++ +  
Sbjct: 116 DMDMY-MRIAPELFLKQLVVGGLDRVYEIGRQFRNEGIDMTHNP-EFTTCEFYQAYADVY 173

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNN 273
           D+++  E +   + +E +    +  +
Sbjct: 174 DLMDMTELMFSEMVKEITGSYIIKYH 199



 Score = 42.0 bits (97), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 28/99 (28%), Gaps = 4/99 (4%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E E         F  PQ      K +        ++++     EI +     +       
Sbjct: 276 ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTELNDPFDQRA 335

Query: 507 AFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAA 541
            F      K+  ++           A + G+PP GG   
Sbjct: 336 RFEEQARQKDQGDDEAQLVDETFCNALEYGLPPTGGWGL 374


>gi|68069109|ref|XP_676465.1| aspartyl-tRNA synthetase [Plasmodium berghei strain ANKA]
 gi|56496176|emb|CAI00406.1| aspartyl-tRNA synthetase, putative [Plasmodium berghei]
          Length = 571

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 73/314 (23%), Positives = 128/314 (40%), Gaps = 24/314 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQV----VANPDSACFEIAKSVRS 67
              + GS + + G +H +R  G + F+ +R+  Y +  +      N D    +   ++  
Sbjct: 117 NKLEEGSCLWVRGRIHDIRSKGSLAFIILRNKIYSLQCILDIKNVNNDKNMIKWVNNLSL 176

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-----------AEELPLPVFG 116
           E ++ I G ++     +I++ II  + E+   KI  +S            A    +    
Sbjct: 177 ESIVDIYGKLVK-PEISIDSTII--KYEIHILKIFCISKNSKELPFLLKDANMKEIDDEA 233

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                +  R   R +DLR    +     ++ I    R  +I  NF E  TP L   S EG
Sbjct: 234 TIRVNQDNRLNNRCIDLRTYANYSIFYLQSEICKIFRNYLIDNNFTEIHTPKLLGESSEG 293

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +    +  NQ  F A  Q+PQ YKQ+ + SGFDR F+IAP FR E+  + R   E+  
Sbjct: 294 GANAFQINYFNQNGFLA--QSPQLYKQMCINSGFDRVFEIAPVFRAENSNTYRHLCEYVS 351

Query: 237 LDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT--DKPDL 293
           LD+EM++  +  + +   +++ + +F +  N          I        +      P  
Sbjct: 352 LDVEMTYKYDYMENVYFYDSMFKNIFNKLINNEQNKLFIKNIKNQYPSEDFKWLAVTPIF 411

Query: 294 RNPIIMHNVTEHFV 307
                +  + EH  
Sbjct: 412 TYEQAIKLLIEHKK 425



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 28/155 (18%)

Query: 420 IAQELGIINCNCFE--FCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLS 476
           + +ELG I     +  +  I++FP             A  PF TM       +       
Sbjct: 442 MEKELGKIIKQTHDTDYYIIINFP------------SALRPFYTMYNEEDPKI------- 482

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  YD    G EI SG  R    +++L       +       +      +F     PH
Sbjct: 483 --SNSYDFFMRGEEILSGSQRISDVKLLLDNIKKFNLDP----KKLDFYIDSFAYSSYPH 536

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G   G++R++ML LG  N+R+ SLFP        
Sbjct: 537 SGCGIGLERVLMLFLGLNNIRKTSLFPRDPKRLTP 571


>gi|31792827|ref|NP_855320.1| lysyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|78099175|sp|Q7VEV7|LYSX_MYCBO RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|31618417|emb|CAD96335.1| Possible lysyl-tRNA synthetase 2 lysX [Mycobacterium bovis
           AF2122/97]
          Length = 1172

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 10/254 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D  + V +SG + R+R +GG++F  +RD  G  QV+ +        A   
Sbjct: 711 SHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAADF 770

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   L   G ++  +     +   TG   L      ++      PLP   +       R
Sbjct: 771 NAATDL---GDLVEMTGHMGASK--TGTPSLIVSGWRLIGKCLR-PLPNKWKGLLDPEAR 824

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR F+  
Sbjct: 825 VRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTH 884

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 885 INTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 942

Query: 244 VEQDDILNTMENVL 257
               + ++    ++
Sbjct: 943 AGYLEWIDGCRELI 956



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 32/192 (16%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNCFEFC 435
            +   +EA+  R+D   G +      D    P +    A      + + L  + C   +  
Sbjct: 1000 HDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLELYEHL--VECRTEQPT 1057

Query: 436  WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            + +DFP             + +P T P                A ++DLV  G E+ +  
Sbjct: 1058 FYIDFP------------TSVSPLTRPHRS---------KRGVAERWDLVAWGIELGTAY 1096

Query: 496  IRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                      +      +                 +A +  MPP GG+  GIDR+VML+ 
Sbjct: 1097 SELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLIT 1156

Query: 552  GAKNVREVSLFP 563
            G  ++RE   FP
Sbjct: 1157 GR-SIRETLPFP 1167


>gi|332664342|ref|YP_004447130.1| asparaginyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332333156|gb|AEE50257.1| Asparaginyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 477

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 117/378 (30%), Gaps = 69/378 (18%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG--ITQVVANPDSACFEIA 62
           R      L    +   + + GWV   R +    F+ + D       Q+V + +     I 
Sbjct: 3   RIEIAKVLAQPALDDTITVMGWVRAFRGNR---FIALNDGSTPHTLQIVLDAEKIDETII 59

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K ++    L I G +++              +E+ A+ IE+L         +   +    
Sbjct: 60  KKIKFHACLSITGQLVASQGAGQA-------VEILAESIEVLGECNPEDGYMMQPKVQTM 112

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                     +R +T       R  I  ++        F    TPI+T S  EGA +   
Sbjct: 113 EFLRTNAHFRMRTNTFSSVFRLRHAIAFAVHKFYNDRGFFYIHTPIITGSDAEGAGEMFH 172

Query: 183 PSRVNQGSFYALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDEDP 225
            + ++  S   L      Y Q                  + A    + +   P FR E+ 
Sbjct: 173 VTTLDTNSPPRLEDGSVDYTQDFFGKATNLTVSGQLQGEIAALALGKIYTFGPTFRAENS 232

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN----------------- 268
            + R   EF+ ++ E++F +  D ++  E   + +       +                 
Sbjct: 233 NTPRHLAEFWMIEPEVAFNDIVDNMDLAEEFTKYLINYCLENHLADLELLDKRLAEEQNA 292

Query: 269 -----------------TVSNNFLRICYDDAIRRYGTDKP----DLRNPIIMHN--VTEH 305
                             V N F RI Y +A+      KP        P+   +   +EH
Sbjct: 293 LPKDKRRAMGLIEQLRFVVDNAFERITYTEAVEILMKSKPYKEKKFEFPVEWGSDLQSEH 352

Query: 306 FVHSEFRVFSKILSVNPG 323
             +   + F K + V   
Sbjct: 353 ERYLVEKEFKKPVIVRNY 370



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 4/95 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    L     E+  G  R    +++++    +GI     E       +  + 
Sbjct: 382 NDDDKTVAAMDVLFPGIGEVIGGSQREDRHDLLVERIKAIGI----AEEELWWYLQLRKF 437

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G  PH G   G +R+V  + G  N+R+V  FP + 
Sbjct: 438 GGAPHAGFGLGFERMVQFITGMSNIRDVIAFPRTP 472


>gi|153856063|ref|ZP_01996954.1| hypothetical protein DORLON_02982 [Dorea longicatena DSM 13814]
 gi|149751725|gb|EDM61656.1| hypothetical protein DORLON_02982 [Dorea longicatena DSM 13814]
          Length = 467

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 73/335 (21%), Positives = 129/335 (38%), Gaps = 29/335 (8%)

Query: 1   MHRYRTHSCGDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           +    T    +L   ++ G+ V+++G VH +R  G + F+ +R   G+ Q V    SA F
Sbjct: 30  VKPKETKEISELLEQAEAGAKVKVNGAVHTIRDMGTVAFVILRKREGLLQCVYEEGSADF 89

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP---VFG 116
           E+ K ++           +               IE+  + ++ILS  E+  +P      
Sbjct: 90  EL-KDIKEA-------ATVEVEGVVEENEKAPNGIEIRMESVKILSEPEDEMMPLAISKW 141

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           +       +  YR + LR          +  +  + R  + ++ F E  TP + A   EG
Sbjct: 142 KLNTSLEAKLNYRSISLRNIRERAKFRIQEGLTRAFRDFLYSQEFTEIHTPKIGAKGAEG 201

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +       ++ +  A  Q+PQ YKQ +M   FDR F+ AP FR E   + R   E+  
Sbjct: 202 GANIFKLEYFHRPAVLA--QSPQFYKQ-MMVGVFDRVFETAPVFRAEKHNTKRHLNEYTS 258

Query: 237 LDMEMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           LD EM +++  +DI+      L+   E                Y   ++  G + PD+  
Sbjct: 259 LDFEMGYIDGFEDIMAMETGFLQYAMELLKK-----------DYARELKVLGVELPDVSQ 307

Query: 296 --PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
              +   ++ E               + P  EV  
Sbjct: 308 IPAVKFADIKEIVAEKYNHKMRNPFDLEPEEEVLI 342



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)

Query: 425 GIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           G      +  +F ++  +P                PF            +   S     +
Sbjct: 343 GRYAKEEWGSDFVFVTHYP------------SKKRPFYAM--------DDPEDSRYTLSF 382

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL+  G EI +GG R H  +++    +  G+++E +E         F+ GMPPHGG+  G
Sbjct: 383 DLLFRGLEITTGGQRIHDYKMLTDKIAARGMTEEGMEQ----YLATFKHGMPPHGGLGIG 438

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           ++R+ M LLG  NVRE +LFP   +  + 
Sbjct: 439 LERLTMQLLGEDNVRETTLFPRDLSRLEP 467


>gi|71020373|ref|XP_760417.1| hypothetical protein UM04270.1 [Ustilago maydis 521]
 gi|46100086|gb|EAK85319.1| hypothetical protein UM04270.1 [Ustilago maydis 521]
          Length = 562

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/289 (20%), Positives = 105/289 (36%), Gaps = 28/289 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVA-----NPDSACFEIA 62
             ++     G  + LS  V   R     ++FL  R      Q               + A
Sbjct: 99  ISEISPERDGEHIVLSARVQTSRAPSAKLVFLTFRQGVDCVQATLAQTPEKVSRQMTKWA 158

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV------------AEEL 110
             + +E ++ ++G ++       +  +     E+   KI   S             A   
Sbjct: 159 AGLAAETIVLVEGTIVKTPKPVESNTVTVKDAEIKISKIHSTSEIAFEQLPFGVDDATRS 218

Query: 111 PLPVFGEREYPE-------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
            + +   ++            R   R LDLR  T          +    R  + + +F+E
Sbjct: 219 EVEIQASQQTDRPLPPIALDTRLDNRVLDLRTTTNQAIFRLTHGVCKLFREYLDSLDFVE 278

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             TP L  ++ E        S     +F A  Q+PQ  KQ+ +A+ F R ++I P FR E
Sbjct: 279 IHTPKLQGAATESGSSVFKVSYFKGQAFLA--QSPQLAKQMAIAADFGRVYEIGPVFRAE 336

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVS 271
           D  + R   EF  LD+EM+F E   ++++ ++ +   +F E        
Sbjct: 337 DSNTHRHMTEFTGLDLEMAFDEHYHEVVDVLDGLFTFIFRELPKRYRKE 385



 Score =  110 bits (275), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 52/234 (22%), Positives = 81/234 (34%), Gaps = 27/234 (11%)

Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398
           AF +  +E        GL    +R         +  V +             + +Q  D+
Sbjct: 355 AFDEHYHEVVDVL--DGLFTFIFRELPKRYRKEIDAVKRQYPCDEFLLPEKTVRLQYKDA 412

Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
              +  +  K      D    + + LG +    ++     DF   +      K      P
Sbjct: 413 IALL-RENGKELGDLEDLSTEMERTLGGLVREKYK----TDFFMLD------KFPLEIRP 461

Query: 459 F-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           F TMP                +  YD    G EI SG  R H +  + +  +  GI  E 
Sbjct: 462 FYTMPDPADNKY---------SNSYDFFMRGQEILSGAQRVHDAAFLEKRMAEFGIPVES 512

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           ++        AF+ G PPH G   G++R+VM  LG  N+R  S+FP      D 
Sbjct: 513 MK----HYVEAFRLGCPPHAGGGIGLERVVMFYLGLGNIRRASMFPRDPKRLDP 562


>gi|294660329|ref|NP_853021.2| asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|298286867|sp|Q7NBM9|SYN_MYCGA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|284811986|gb|AAP56589.2| Asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930499|gb|ADC30438.1| Asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 456

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 129/382 (33%), Gaps = 40/382 (10%)

Query: 9   CGDLGVSD---VGSFVRLSGWVHRVRPHGGIIFLDIRDHYG---ITQVVANPDSACFEIA 62
             +L +S     G  V L G    +R  G I F+   D      +  V    ++  F+  
Sbjct: 6   IKELLLSHSKREGEQVVLVGSFKSIRSSGAIGFIAFSDSTALEPVQIVFKKENTPNFDEI 65

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
             +    ++ + G+V +   +           E+ A KI +L  A+        ++ +  
Sbjct: 66  SKLPISSMILVKGVVRNTPEKKQP-------FEIQASKIVVLKEADPSYPLQ--KKAHGS 116

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
               +   L +R +  +  +  R+ + N+        +F+    P++T++  EGA +   
Sbjct: 117 EFLRENAHLRVRTNKFYVIMKIRSELANAFFEFFKNNDFLYVHAPLITSNDSEGAGESFE 176

Query: 183 PSRVNQGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               N  +++    +     Q+     A GF R F   P FR E   + +   EF+ ++ 
Sbjct: 177 VISPNDPNYFGKKASLTVSGQFAAEAYAQGFKRVFTFGPTFRAEKSHTSKHLSEFWMIEP 236

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL--------------RICYDDAIRR 285
           E+S ++ D +   +E  ++       +       +                I  D     
Sbjct: 237 EVSLMDLDKLTILIEQCVKHAIYYLFDYAKPELEWCNENLEPGLIDKLNNVINNDFPRVE 296

Query: 286 YGTDKPDLRNPI---IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
           Y      L+  +   +   V +     + +   +       ++            +AF  
Sbjct: 297 YREVIEILKKAVAEGVEFEVKDIHFGMDLKSEHERYICEKVFKRPVFVINYPKDVKAFYM 356

Query: 343 RMNE-----WARSQGQPGLAYI 359
           ++N+      A     PG+  I
Sbjct: 357 KLNDDNQTVAATDLLAPGIGEI 378



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
             +D  ++ A   DL+  G  EI  G  R      +L     + I  E   N        
Sbjct: 358 LNDDNQTVAAT--DLLAPGIGEICGGSQREDSYNKLLTRCLELDIDPEF--NNLQWYLDL 413

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            + G     G   G +R++M + G  N+R+   FP 
Sbjct: 414 RKYGYYRSAGFGLGFERLLMYVTGCDNIRDAIPFPR 449


>gi|238501880|ref|XP_002382174.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Aspergillus
           flavus NRRL3357]
 gi|220692411|gb|EED48758.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Aspergillus
           flavus NRRL3357]
          Length = 612

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 108/284 (38%), Gaps = 23/284 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VHR+R    ++F+ + D YG  Q +   D        ++     + I G +
Sbjct: 138 GTRVRVLGRVHRLRSQKDVVFITLTDGYGYLQCILTGDMVKAYDIMTLTLGTSMSIHGEM 197

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRR 135
            +   +    N      EL A    I+  A  ++  +      +      +  R L LR 
Sbjct: 198 RAVPPKQHAPNNR----ELHADFFTIIGRAAGDKEAITTRVAPDSDPQTLYDNRHLVLRG 253

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +T    +  R   + + R        +E + P +  +  EG           + ++  L 
Sbjct: 254 ETASAVMKVRAATLRAFRKVFEENRMLEVTPPAMVQTQVEGGSTLFKFDYYGENAY--LT 311

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+ Q Y +  + S     F + P FR E   + R   E+  ++ E+ F+   D+L+ +E 
Sbjct: 312 QSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEYTHIEAELDFITFTDLLDHLEA 370

Query: 256 VLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRR 285
           V+  V E                 +    S  F R+ Y DAI+ 
Sbjct: 371 VICRVIELILAEPETAAFINQLNPDFKPPSRPFRRMKYSDAIQW 414


>gi|328875378|gb|EGG23743.1| aspartyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 567

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 74/391 (18%), Positives = 136/391 (34%), Gaps = 58/391 (14%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH----YGITQVVANPDSACFEIAKSV 65
           DL +      V +   VH  R  G  + FL +RD      G+    A+   +  + A S+
Sbjct: 85  DLTIEKDTQKVLIRARVHGSRLQGANLCFLTLRDTLFTVQGVLAKNASNSKSMVKFAGSI 144

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-------- 117
             E ++ + G +        + +     +EL    I ++S A  +PL +           
Sbjct: 145 TKESIVDVQGTISKVPKPIESCSQK--DVELHITSIFVVSEAHIIPLQLEDLSRPIHILE 202

Query: 118 ------------------------------------REYPESIRFKYRFLDLRRDTLHKN 141
                                                E  +  R   R LDLR       
Sbjct: 203 EQDKVIAKLSEELKNTSLNEKQKEELEKKKSEASKYVEVSQDKRLDNRVLDLRVPAHQAI 262

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
              ++ +    R  ++  +F+E  +P + +S+ E           +  +F A  Q+PQ Y
Sbjct: 263 FKLQSAVGLLFREYLVGRDFVEIHSPKMISSASESGASVFKLGYFDTHAFLA--QSPQFY 320

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGV 260
           KQ+ + +  +R F+I P FR E+  + R   EF  LD+EM+F E   ++L+ ++N++  +
Sbjct: 321 KQMAICADMERVFEIGPVFRAENSFTHRHLTEFVGLDIEMTFREHYHEVLDELDNLMTSI 380

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
           FE          +   I        +   +P  R                  V    ++ 
Sbjct: 381 FEGLETRFKKEIDI--ISQQYGYEPFKWTRPSPRF--TFDQAAAFLKEIGEEVVDNDINT 436

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           +    +  I  +  G +    D+    AR  
Sbjct: 437 SQEKRLGKIIKEKYGVDFYIIDKFYRTARPF 467



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 24/151 (15%)

Query: 422 QELGIINCNCFEFCW-IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           + LG I    +   + I+D           K      PF                 + A 
Sbjct: 440 KRLGKIIKEKYGVDFYIID-----------KFYRTARPFYTMPD--------PNNVLLAN 480

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDL   G EI SG  R H + ++ ++  N GI+ + ++        AF+ G  PH G  
Sbjct: 481 AYDLFMRGEEICSGAQRIHDAVMLEESAKNHGINIQSIQA----YIDAFKFGASPHAGGG 536

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G++R+VML +G  N+R+ SLFP      + 
Sbjct: 537 VGLERVVMLYMGLGNIRKTSLFPRDPRRIEP 567


>gi|271964174|ref|YP_003338370.1| lysyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
 gi|270507349|gb|ACZ85627.1| Lysyl-tRNA synthetase (class II)-like protein [Streptosporangium
           roseum DSM 43021]
          Length = 1098

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/293 (19%), Positives = 106/293 (36%), Gaps = 22/293 (7%)

Query: 5   RTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTH+  ++  +          G  V ++G V  VR HGG++F  + D  G  Q++    +
Sbjct: 643 RTHTAAEVRRAHPGRAADLRTGERVAVAGRVMLVRDHGGLLFATVADWTGTLQLMITKAA 702

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
                  +V     +   G V++           TG++ + A++    +     P P   
Sbjct: 703 GLERWRDTVDLGDHVGCVGEVVTT---------RTGELSVLAEEWATTAKCLR-PPPGRR 752

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                +  R   R      D   +     R  +++ +R  ++   F+E  TPIL      
Sbjct: 753 RGAPGQETRAGRRHPGPVTDPEARETLRIRGAVLHGLRDSLVRRGFLEVETPILQPVHGG 812

Query: 176 G-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+          Y L  AP+ + + L   G +R F++   FR+E       P EF
Sbjct: 813 ACARPFVTHMNAYDMRLY-LRIAPELHLKRLCVGGAERVFELGRTFRNEGVSYKHNP-EF 870

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
             L+   ++ +   +L     +++           +  +   I      R  G
Sbjct: 871 TMLEAYQAYADYRTMLELARELVQEAAIAAFGAPVIRRHGQEIDISGVWRTVG 923



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 51/154 (33%), Gaps = 28/154 (18%)

Query: 414  ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                  + + L  +        +  DFP               +P T P      L    
Sbjct: 963  GAMLLELYERL--VEERTAGPVFYTDFP------------SEVSPLTRPHRQDPRL---- 1004

Query: 474  LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAF 529
                 A ++DLV  G E+ +            +  +   +                 R  
Sbjct: 1005 -----AERWDLVAYGVELGTAYSELVDPVEQRRRLTEQSLLAAAGDPEAMELDEDFLRTL 1059

Query: 530  QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  MPP GG+  G+DR++MLL G K++R+   FP
Sbjct: 1060 EYAMPPTGGLGIGVDRLIMLLTG-KSIRQTLSFP 1092


>gi|121703221|ref|XP_001269875.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus clavatus NRRL 1]
 gi|119398018|gb|EAW08449.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus clavatus NRRL 1]
          Length = 958

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 72/367 (19%), Positives = 137/367 (37%), Gaps = 29/367 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVAN-----PDSACFEIAKSV 65
           +  ++VG  V  +  +H VR     ++FL  R      Q V +        A  + A+ +
Sbjct: 144 ISAANVGQEVLFTTRLHIVRRMSSKLVFLIFRQQLTTFQGVLHEVPGAKSIAMIQWAEHL 203

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL---------SVAEELPLPVFG 116
           R   ++ + G+V +     +  +I    +EL  ++I ++         SV E        
Sbjct: 204 RLGSIVHVRGIVQAPEVPVLGCSIH--DVELRIEQIHLVVHREEPVPFSVYEAEIRTAEE 261

Query: 117 ER------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           ER         +  R   R LDLR  T       ++ + N  R  +  + FIE  TP L 
Sbjct: 262 ERVEGRRSHISDRTRLNNRLLDLRTPTAQSIFRIQSALSNIFRSSLDEQGFIEIHTPKLQ 321

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            S+ E        +   + +F A  Q+PQ  KQ+ +A+ F R ++I   FR E+  + R 
Sbjct: 322 GSATESGASVFQVNYFGRDAFLA--QSPQLAKQMCIAADFGRVYEIGAVFRAENSNTHRH 379

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             E+  LD+EM+  E   ++L  ++ V++ +              ++  +      +   
Sbjct: 380 LTEYTGLDLEMAIEEHYHEMLEVLDAVIKNILTVVYGRYRKEVEIVKHQFPSEDVVWLEQ 439

Query: 290 KPDLRNPIIMHNVTE---HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
            P +R    +  + +              + L       +  +  +  G +    D+   
Sbjct: 440 TPIIRFADGIKMLNDSGWRDEDGNPLPDDEDLHTRDEIRLGELVKEQYGTDYYILDKFPT 499

Query: 347 WARSQGQ 353
            AR    
Sbjct: 500 GARPFYA 506



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/167 (26%), Positives = 67/167 (40%), Gaps = 22/167 (13%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF             D        +D+   G EI SGG R H   ++ +    
Sbjct: 496 KFPTGARPFYAMPD------PEDPR--FTNSFDIFIRGQEIVSGGQRIHDPHMLEENMLR 547

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI+ E++++        F+ G PPH G   G++R++MLLL   N+R  SLFP       
Sbjct: 548 WGINPELMDD----YMEGFRWGAPPHAGAGVGLERLLMLLLKLGNIRLASLFPRDPKSF- 602

Query: 571 LLMGSPSTVSVEQLRELGLRIVENP----KKILKISVTTILRNVYGL 613
                P+   V QLR      VE P    K+  +    + L+ +  L
Sbjct: 603 -----PAKPPVLQLRHPESSTVEPPWVREKEGQRAKDESQLQPLEHL 644


>gi|62185412|ref|YP_220197.1| lysyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312438|sp|Q5L545|SYK_CHLAB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|62148479|emb|CAH64249.1| putative lysyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 526

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/310 (19%), Positives = 121/310 (39%), Gaps = 28/310 (9%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD------SACFEIAKSVRSEWVLCI 73
            V++SG +   R  G   F  I D+    QV+ N D               ++       
Sbjct: 66  KVKISGRMVLFRSMGKNAFAQILDNDQKIQVMFNRDFSSVAGLPVDAEISPIKFIEKKLD 125

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++         +  +G++ +  + + +L  +  + LP        +  R++ R+LDL
Sbjct: 126 LGDILGIEGYLFFTH--SGELTILVETVSLLCKSL-ISLPDKHAGLSDKETRYRKRWLDL 182

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSF 191
              D + +  +KR+RII  +R  M A+ FIE  TPIL        A  F+          
Sbjct: 183 IASDEVRQTFLKRSRIIKLIRHYMDAQGFIEVETPILQNVYGGAEATPFITMLNALHSEV 242

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + L  +P+   + ++  G  R ++I   FR+E       P EF  ++   + ++   ++ 
Sbjct: 243 F-LRISPEISLKKILVGGTPRIYEIGKVFRNEGIDRTHNP-EFTIIEAYATNIDYHSVMT 300

Query: 252 TMENVLRGVFEEFSN---------------GNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
            +EN++  +  E ++                      ++R+   D+I+ YG    DL   
Sbjct: 301 YVENLVEHLVCELNDGSTVLTYTHLKQGPVSIDFKAPWIRMTMKDSIKTYGGVDVDLHGD 360

Query: 297 IIMHNVTEHF 306
             +  + +  
Sbjct: 361 HELRKILKEC 370



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 16/128 (12%)

Query: 451 KIDFAHNPFTMPQGGME---SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS------ 501
           K+   H+    P        SL+  D   +   +++  C G E+ +     +        
Sbjct: 398 KLIAPHHITDHPVETTPLCKSLRSGDADFV--ERFESFCLGKELCNAYSELNDPLRQRVL 455

Query: 502 --EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             +   +   +       ++  F     A   G+PP GG   GIDR+VM+L  A ++R+V
Sbjct: 456 LEQQQAKKALDPDSEYHPIDEEF---LEALCQGLPPTGGFGIGIDRLVMILTNAASIRDV 512

Query: 560 SLFPMSQN 567
             FP  + 
Sbjct: 513 LYFPAMRR 520


>gi|269957752|ref|YP_003327541.1| lysyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269306433|gb|ACZ31983.1| lysyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 504

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/274 (21%), Positives = 111/274 (40%), Gaps = 20/274 (7%)

Query: 6   THSCGDLGVS----DVGSF---VR-LSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDS 56
           TH+   +       + G     V  ++G V  +R  G + F+ ++D  G   Q + +   
Sbjct: 44  THTIAQVRAGYGHLEAGQETDDVAGVAGRVVFLRNTGKLCFVTLQDGAGNRLQAMLSLAV 103

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E   + +S+  L     V  R   +       G++ + A +  +   A+ L      
Sbjct: 104 VGEEALAAFKSDVDLGDHLFVHGRIGASRR-----GELSVFADEWRL--AAKSLRPLPVL 156

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSP 174
            ++  E  R + R++DL  R      +  R  ++ S+R      +FIE  TP+L T +S 
Sbjct: 157 HKDLSEESRVRQRYVDLIARPAARDMVRLRADVVRSLRENFHRRDFIEVETPMLQTIASG 216

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F           + +  AP+ + +  +  G +R F+I   FR+E   S   P EF
Sbjct: 217 ATARPFTTHMNAYDMELF-MRIAPELFLKRAVVGGVERVFEINRNFRNEGADSTHSP-EF 274

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
             L+   ++ + + I    +N+++   +E     
Sbjct: 275 AMLEAYEAYGDYNTIGALTQNLVQTAAQEVLGTT 308



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 59/170 (34%), Gaps = 46/170 (27%)

Query: 418 NHIAQELGIINCNC-----------FEFC---------WIMDFPFYEWNEEEKKIDFAHN 457
             I + L +   +            +E C         ++ DFP      E   +  AH 
Sbjct: 351 LKIGRRLDLELEHKAVNHGKLVETLWEHCVGDHLTAPTFVRDFPV-----ETSPLVRAHR 405

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
                            +  +  ++DL   GFE+A+G        +  + F    +    
Sbjct: 406 ----------------EVPGQVEKWDLYVRGFELATGYSELVDPVIQRERFEAQALLAAA 449

Query: 518 VENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            ++           A +  MPP GG+  G+DR++M L G   +RE  LFP
Sbjct: 450 GDDEAMRIDEDFLVAMEHAMPPTGGMGMGLDRLLMALTGLG-IRETILFP 498


>gi|119480319|ref|XP_001260188.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Neosartorya
           fischeri NRRL 181]
 gi|119408342|gb|EAW18291.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Neosartorya
           fischeri NRRL 181]
          Length = 574

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/285 (22%), Positives = 112/285 (39%), Gaps = 23/285 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            G+ VR+ G VHR+R    +IFL + D YG  Q V   +      A ++  E  + I G 
Sbjct: 148 AGTRVRVLGRVHRLRVQKDVIFLTLSDGYGYLQCVLTGNLTKTYDAMTLTLETSMAIHGE 207

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLR 134
           + +   +    N      EL A    ++  A  ++  +     ++      +  R L LR
Sbjct: 208 MRAVPPKQHAPNDR----ELHADFFTVIGRAAGDKEAITTRVAKDADPQTLYDNRHLVLR 263

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +T    +  R   + + R     +  +E + P +  +  EG           + ++  L
Sbjct: 264 GETSSAVMKVRAACLKAFRQVFEEKRMLEVTPPAMVQTQVEGGSTLFKFDYYGEDAY--L 321

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y +  + S     F + P FR E   + R   E+  ++ E+ F+   D+L+ +E
Sbjct: 322 TQSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEYTHIEAELDFITFTDLLDHLE 380

Query: 255 NVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRR 285
            V+  V E                 +    S  F R+ Y DAI+ 
Sbjct: 381 EVICRVIELTLADPATAALIKQLNPDFKPPSRPFRRMKYADAIQW 425



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                   F M +   E  +  + + +      L+    EI  G +R    + ++ A+ +
Sbjct: 465 HFPAEIKAFYMKK-DPEDRRVTESVDV------LMPGVGEIVGGSMRMDDWDELMAAYKH 517

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+        +       + G  PHGG   G++R +  L     VR+  L+P     C 
Sbjct: 518 EGMDPTP----YYWYTDQRKYGTSPHGGYGLGLERFLAWLCARYTVRDCCLYPRFTGRCT 573

Query: 571 L 571
            
Sbjct: 574 P 574


>gi|75761058|ref|ZP_00741057.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74491442|gb|EAO54659.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 267

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 85/246 (34%), Gaps = 28/246 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWV 70
                G  V++SGW+  +R      F+++ D      V    + +   F+    +     
Sbjct: 25  TEKYAGQTVQVSGWIRNLRDSKAFGFIELNDGSFFKSVQIVFDTELENFKEIAKLPLSSS 84

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G V++               E+ A+KI+I  +++    P+  +R   E +R     
Sbjct: 85  VKVEGKVIATPG-------AKQPFEIKAEKIDIEGLSDSDY-PLQKKRHTFEYLR-TIAH 135

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R+    ++        F+   TPI+T S  EGA +    +  +   
Sbjct: 136 LRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDLNN 195

Query: 190 -------------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+          Q      A  F   +   P FR E+  + R   E
Sbjct: 196 VPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHAAE 255

Query: 234 FYQLDM 239
           F+ + +
Sbjct: 256 FWMVSL 261


>gi|164688109|ref|ZP_02212137.1| hypothetical protein CLOBAR_01754 [Clostridium bartlettii DSM
           16795]
 gi|164602522|gb|EDQ95987.1| hypothetical protein CLOBAR_01754 [Clostridium bartlettii DSM
           16795]
          Length = 439

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 122/264 (46%), Gaps = 18/264 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              + L GWV+++     I+F+ +RD  GI Q+V N      E  + ++ E  + + G  
Sbjct: 24  DETILLRGWVYKIIDLSNIVFVKLRDKSGIIQLVTNK-----EQIEGLKLENAIEVIG-- 76

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF---GEREYPESIRFKYRFLDLR 134
                ++ N     G IE+   +I+IL       LP      + +     +  +R + LR
Sbjct: 77  ----KKSKNEK-APGGIEIIVDEIKILGRTYYDKLPFEINSYKNKAALETQLDHRTIALR 131

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           R  +      +  I  + R  + ++NF +  T  +  SS EG  +    +  ++ SF A 
Sbjct: 132 RPEIRAIFKVQNEIEQAFRDYLRSKNFEQIHTAKIIDSSTEGGSEMFTVNYFDRRSFLA- 190

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTM 253
            Q+PQ YKQ+++ +GF+R ++I   +R E   + R   E+  LD+EM F+ ++ ++++  
Sbjct: 191 -QSPQFYKQMMVGAGFERVYEIGHAYRAELHNTWRHLNEYVSLDVEMGFIKDEFELMDLE 249

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRI 277
           E  L  +F+  +          ++
Sbjct: 250 EGFLDYLFKHLNKVCKKELEMYKV 273



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 4/128 (3%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           ++ ++E   +F                 +D        +DL+ +G EI +GG R +  E+
Sbjct: 316 DYVKKEYGTEFVFLTKYPVAKRPMYTMPDDEDKTLTKSFDLIYDGLEITTGGQRINDYEM 375

Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + +     G++       F      F+ GMPPHGG A G++R+ M +L   N+RE +L P
Sbjct: 376 LKENIIKFGLNP----EDFDFYLDTFKYGMPPHGGFAIGLERLTMKILKLSNIREATLVP 431

Query: 564 MSQNFCDL 571
                   
Sbjct: 432 RDMKRLTP 439


>gi|51491207|emb|CAH18669.1| hypothetical protein [Homo sapiens]
          Length = 401

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 76/326 (23%), Positives = 134/326 (41%), Gaps = 43/326 (13%)

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-- 117
           + A ++  E ++ ++G+V  R       +     +EL  QKI ++S+AE        +  
Sbjct: 3   KFAANINKESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAV 60

Query: 118 -----------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                          +  R   R +DLR  T       ++ I +  R  +I + F+E  T
Sbjct: 61  RPEAEGEEEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQT 120

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P + +++ EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  
Sbjct: 121 PKIISAASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSN 178

Query: 227 SDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF- 274
           + R   EF  LD+EM+F        ++I +TM  + +G+ E F       N       F 
Sbjct: 179 THRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFK 238

Query: 275 -----LRICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSV 320
                LR+ Y +A+           D+ DL  P    + ++ +    ++F +  K  L+V
Sbjct: 239 FLEPTLRLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAV 298

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNE 346
            P Y +          +     R  E
Sbjct: 299 RPFYTMPDPRNPKQSNSYDMFMRGEE 324



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 245 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 294

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 295 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 345

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 346 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 401


>gi|22775674|dbj|BAC15528.1| putative asparaginyl-tRNA synthetase, chloroplast/mitochondrial
           precursor [Oryza sativa Japonica Group]
 gi|50509311|dbj|BAD30675.1| putative asparaginyl-tRNA synthetase, chloroplast/mitochondrial
           precursor [Oryza sativa Japonica Group]
          Length = 584

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/390 (15%), Positives = 126/390 (32%), Gaps = 79/390 (20%)

Query: 3   RYRTHSCG-----DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPD 55
           R RT         D G + VG  + + GWV   R    + F+++ D   ++ +     PD
Sbjct: 79  RRRTRVADVKGGEDEGAAWVGKQLAVRGWVRTCRAQRTVTFVEVNDGSCLSNMQCVLTPD 138

Query: 56  SACFEIAKSVRSEWV-------------LCIDGLVMSRSAETINANIITGQIELSAQKI- 101
           +  ++    + + ++             + ++G++ S         +   +I ++   I 
Sbjct: 139 TEGYDQYILLVNIFIGGCQIDSITTGASVLVEGVIASSQGGKQKVELKVSKISVAVDNII 198

Query: 102 --------EILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
                     +  ++    P+  +R            L  R +T       R  +  +  
Sbjct: 199 PGKHASSAFFIGESDPTSFPIQKKR-ASREFLRTVAHLRPRTNTFGAVARVRNALAYATH 257

Query: 154 CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG-----------------------S 190
                  F+  ++PI+TAS  EGA +    + +                           
Sbjct: 258 KFFQDNGFVWVASPIITASDCEGAGEQFYVTTLISNSAEGGSLVKDIPSTKDGRVDWSQD 317

Query: 191 FYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           F+  P       Q      A+     +   P FR E+  + R   EF+ ++ E++F + +
Sbjct: 318 FFCKPAFLTVSGQLNGETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLN 377

Query: 248 DILNTMENVLRGVFEEFSN---------------------GNTVSNNFLRICYDDAIRRY 286
           D +    + L+ V +                          + V  NF+ + Y DAI   
Sbjct: 378 DDMACASSYLQYVVKYVLENCKEDMDFFNTWIEKGIIDRLNDVVEKNFVHLSYSDAIELL 437

Query: 287 GTDKPDLRNPII--MHNVTEHFVHSEFRVF 314
              K     P+   +   +EH  +     F
Sbjct: 438 VGSKKKFEFPVKWGLDLQSEHERYITEVAF 467



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 4/102 (3%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    LV    E+  G  R    + +      + ++K    + +      
Sbjct: 486 MRENDDGKTVAAMDLLVPRVGELIGGSQREERLDYLEARLDELNLNK----DSYWWYLDL 541

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            + G  PH G   G +R+V    G  N+R+   FP      +
Sbjct: 542 RRYGSVPHAGFGLGFERLVQFATGMDNIRDTIPFPRVPGSAE 583


>gi|298246266|ref|ZP_06970072.1| aspartyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297553747|gb|EFH87612.1| aspartyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 437

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 73/275 (26%), Positives = 120/275 (43%), Gaps = 16/275 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M + RT +  ++    VG  VR+ GW+   R  G I FL IRD +G  Q VA  ++    
Sbjct: 1   MQKTRTLT-TEIHK-HVGERVRVQGWLQSWRQLGSIHFLVIRDGWGQIQAVAESEAEIAP 58

Query: 61  IAK-SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           + +     E ++ I+GLV S            G IEL    IE++    E P     +R+
Sbjct: 59  LIEAEAGVESLVAIEGLVESVPQ-------APGGIELHNLAIELIEPIRETPPFPINKRK 111

Query: 120 YP--ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                S    +  +  R  T    +   + +  + R  ++   F E  TP +  ++ EG 
Sbjct: 112 INAQLSTLLDHAVITHRHPTRRAVLRLSSVLSQAFRESVLTRGFTEIHTPKILGTTTEGG 171

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +        + ++ A  Q+PQ YKQ +M   F+R F++ P FR E+  S R   E+  L
Sbjct: 172 ANVFKLDYFGRPAYLA--QSPQLYKQ-IMVGVFERVFEVGPVFRAEEHDSTRHLNEYVSL 228

Query: 238 DMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVS 271
           D+EM F+E    I+  + ++L  +   F       
Sbjct: 229 DVEMGFIENHFTIMALLRDILADIIGAFQEHCAPE 263



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 4/125 (3%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           EW  +E   DF +      +        +         +DL+  G E+ +GG R H    
Sbjct: 314 EWAMKEFGSDFLYVAGYPTKKRPFYTHTDPERPEYTNSFDLLFRGLELVTGGQRLHRYAD 373

Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            L+A  +  +S       F     AF+ GMPPHGG A G +R++M LLGA NVR  + FP
Sbjct: 374 YLEALQSRNMSM----EPFEHYLEAFRYGMPPHGGFAIGSERLLMQLLGAPNVRLTTTFP 429

Query: 564 MSQNF 568
              + 
Sbjct: 430 RDMHR 434


>gi|169766764|ref|XP_001817853.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
 gi|238483535|ref|XP_002373006.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus flavus NRRL3357]
 gi|83765708|dbj|BAE55851.1| unnamed protein product [Aspergillus oryzae]
 gi|220701056|gb|EED57394.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus flavus NRRL3357]
          Length = 954

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 72/372 (19%), Positives = 137/372 (36%), Gaps = 30/372 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH----YGITQVVANPDSACF 59
           RT    D+ V  VG  V  +  +H +R     ++FL  R       G+       +S   
Sbjct: 134 RTKF-EDISVDSVGKEVLFTARLHIIRRMSAKLVFLVFRQQLYTFQGVLHETPGKNSIAM 192

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--VFG 116
            +  + +R   ++ + G + +     +   I    +EL+   + ++   EE         
Sbjct: 193 VQWVEHLRVGSIVQVRGTIQAPEVPVLGCTIH--DVELAIDAVHVVVRREEPVPFSVYEA 250

Query: 117 EREYPES-------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
           E + PE               R   R LDLR  T       ++ + N  R  +  +NFIE
Sbjct: 251 EIQTPEEERVEGRRSHIPDRTRLTNRLLDLRTPTSQSIFRIQSAVGNLFRTALDEQNFIE 310

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             TP L  S+ E        +   + +F A  Q+PQ  KQ+ +A+ F R ++I   FR E
Sbjct: 311 IHTPKLQGSATESGASVFEVNYFGRDAFLA--QSPQLAKQMAIAADFGRVYEIGAVFRAE 368

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           +  + R   E+  LD+EM+  E   ++L  ++ V++ + +            ++  +   
Sbjct: 369 NSNTHRHLTEYTGLDIEMAIEEHYHEMLEVLDAVIKNILKGIYGRFRREIETVKQQFPSD 428

Query: 283 IRRYGTDKPDLRNPIIMHNVTE---HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
              +  + P +R    +  + +                L       +  +  +  G +  
Sbjct: 429 DVVWLEETPIIRFSDGIKMLNDSGWRDEEGNPLPVDDDLHTRDEIRLGELVKEKYGTDYY 488

Query: 340 FCDRMNEWARSQ 351
             D+    AR  
Sbjct: 489 ILDKFPTSARPF 500



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 57/243 (23%), Positives = 84/243 (34%), Gaps = 35/243 (14%)

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            G+   F R  E+            L           + M +        G+PL      
Sbjct: 408 KGIYGRFRREIETVKQQFPSDDVVWLEETPIIRFSDGIKMLNDSGWRDEEGNPLPVDDDL 467

Query: 414 ADARNHIAQELG-IINCNCFEFCWIMD-FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
              R+ I   LG ++        +I+D FP             A   +TMP         
Sbjct: 468 -HTRDEI--RLGELVKEKYGTDYYILDKFP-----------TSARPFYTMPDPDDNRFTN 513

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +D+   G EI SGG R H  +++ +    VGI+ + +E         F+ 
Sbjct: 514 S---------FDIFIRGQEIVSGGQRIHDPQMLEENMRRVGINPDTMEE----YMEGFRW 560

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           G PPH G   G++R +MLLL   N+R  SLF             P+     QLR      
Sbjct: 561 GAPPHAGAGVGLERFLMLLLKLGNIRLASLFYRDPRSF------PAKPPTLQLRHPESST 614

Query: 592 VEN 594
           VE 
Sbjct: 615 VEP 617


>gi|218883641|ref|YP_002428023.1| asparaginyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765257|gb|ACL10656.1| asparaginyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 432

 Score =  159 bits (401), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 65/326 (19%), Positives = 120/326 (36%), Gaps = 34/326 (10%)

Query: 7   HSCGDLGVSD-VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
            S  ++  +D +GS V + GW++R    GG  F+ +RD  G+ QVV +       +   +
Sbjct: 4   KSIAEIMSNDKIGSHVCIRGWIYRRSVVGGKAFIRVRDSSGVIQVVVDSARLGEALVDEL 63

Query: 66  RSE---WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           +       +   G V              G  EL     +I+  + + P+    +     
Sbjct: 64  KDIGLEASVVACGTVRREER-------APGGYELDVDFFKIIGYSRDFPI----KGGEGI 112

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                 R L +R     K    +  I+ + R       + E + PILTAS+ EG      
Sbjct: 113 EYLLDNRHLWVRSPRFTKIFRIKHTILQAGREYFTRNGWWEVNPPILTASACEGGATLFP 172

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  ++  L Q+ Q Y + L+    ++ + + P FR E  R+ R   E++ L+ E +
Sbjct: 173 VEYFESKAY--LSQSAQLYLEALI-YVLEKVWSLTPSFRAEKSRTRRHLAEYWHLEPEAA 229

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNT----------------VSNNFLRICYDDAIRRY 286
           +   DD++   E +   +                         +   + RI YD+AI   
Sbjct: 230 WYSMDDMMKVAEELASHIVTRVLEERRSELVDLGRDIEKLKPAMETPYPRIRYDEAIEIL 289

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSEFR 312
                +++    +    E  +  EF 
Sbjct: 290 QKKGVNVKWGDDLGADEERILTMEFE 315



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 19/125 (15%)

Query: 447 EEEKKIDFAHNP-----FTMPQGGMESLKGNDLLSIKAFQYDLVCN--GFEIASGGIRNH 499
           E EK     H P     F M          ++   +    +DL+      EI  GG R  
Sbjct: 313 EFEKPFFVTHFPRQIKSFYMKVD------PSNPNVVLG--FDLLAPEGYGEIVGGGERED 364

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             +V+ Q     G++ E  +          + G  PH G   G++R+ M + G  ++R+ 
Sbjct: 365 RYDVLYQKIIEQGLNPEDYK----WYLDLRKYGSVPHSGFGLGVERVTMWITGLDHIRDT 420

Query: 560 SLFPM 564
             FP 
Sbjct: 421 LPFPR 425


>gi|119873242|ref|YP_931249.1| lysyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119674650|gb|ABL88906.1| lysyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 482

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 79/323 (24%), Positives = 137/323 (42%), Gaps = 41/323 (12%)

Query: 2   HRYR-THSC---GDLGVSD-----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           H +R THS     +L         VG  +R +G V  +R H  ++F+D+ +     QV+A
Sbjct: 30  HSFRITHSVRALNELRRQALLEPWVGLVIRTAGRVTDIRRHPNVVFIDLYEDGARFQVMA 89

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +P  +  +    +     + ++G+++             G   + A  + +L+ A + PL
Sbjct: 90  DPRHSLLDY---IWRGDYIGVEGVIVKTQR---------GDYAVRASSLVLLAKAVQ-PL 136

Query: 113 PVFGEREYPESIRFKYR----FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
           P +G+ +       +YR     LDL    L   I  R + I ++R  M    FIE  TP+
Sbjct: 137 PEWGKVDRDSPFYMRYRSVAMVLDL---QLRWRIAARAKFIQALREAMWKRGFIEIPTPV 193

Query: 169 LTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L        AR F          +Y L  +P+ Y +  + +GF + F++ P FR+ED  +
Sbjct: 194 LQPIYGGAAARPFTTKIWAIDEEWY-LRISPELYLKRYIIAGFPKVFEVGPQFRNEDIDA 252

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVL---------RGVFEEFSNGNTVSNNFLRIC 278
              P EF+ L+   ++ + +D++   E V+          GV +        S  + RI 
Sbjct: 253 LHNP-EFWSLEAYQAYADYNDMMKLTEEVVYEAVSAVLGTGVVKYRDQTINFSPPWRRIT 311

Query: 279 YDDAIRRYGTDKPDLRNPIIMHN 301
             DA+R YG   PD      +  
Sbjct: 312 LHDALREYGGVDPDRLTDDQIKE 334



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 51/145 (35%), Gaps = 23/145 (15%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           ++     E  +++D+P     EE   +   H                        +++  
Sbjct: 359 LVEKKLVEPTFVLDYP-----EESTPLCKPHR----------------EKRGLVERFEAF 397

Query: 486 CNGFEIASGGIRNHMSEVMLQ--AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
             G E+A+     +      +          KE               GMPP GG+  GI
Sbjct: 398 VGGHEVANAYTELNDPVRQYEYFVREEELFPKEEAHPLDWDFVEELSFGMPPTGGVGIGI 457

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNF 568
           DR+ M++  A+++++V  +P+ +  
Sbjct: 458 DRLAMVITNAESIKDVIPYPIVKRA 482


>gi|50954026|ref|YP_061314.1| aspartyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50950508|gb|AAT88209.1| aspartyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 425

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 66/279 (23%), Positives = 115/279 (41%), Gaps = 24/279 (8%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE----IAKSVRSEWVLCIDGLV 77
            ++GWV  VR    + F+ +RD  G  Q+  NP +   +      +   +   L     V
Sbjct: 2   SVAGWVETVRDQKKVQFVVLRDESGAVQL-VNPRTVNEDGTVAADEPALTVSGLSQGSFV 60

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +      +  +  G IE+    +++ + A           +     R  +RFLDLR   
Sbjct: 61  RATGELKHDERVKLGGIEIKLSALDVETAAIPETPIAA---DSGIDKRMDWRFLDLREPK 117

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            +     +T   N++R   +   FIE  TP L AS+ E   +          ++ A  Q+
Sbjct: 118 HNLIFRVQTTFENALRHYWVDNGFIEIHTPKLMASASESRAELFELPYFETTAYLA--QS 175

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMENV 256
           PQ +KQ+  A+GF + F+I P FR +   + R   EF  +D E+S++E  +D++   E++
Sbjct: 176 PQIFKQMAQAAGFGKVFEIGPAFRADPSFTSRHATEFTSVDTEISWIESHEDVMKVHEDL 235

Query: 257 LRGVFEEFSNGN-------------TVSNNFLRICYDDA 282
           L   F      +               +  F RI   +A
Sbjct: 236 LVAGFTAVKEKHGAEIEALFGVEITVPTTPFPRIPLAEA 274



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 26/131 (19%)

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
             EF ++ D               +  P+  M      S+            YDL+ NG 
Sbjct: 309 GHEFVFLTD------------YAASIRPYYHMRHSEDRSI---------TKSYDLIFNGV 347

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI++G  R H  E + Q     G+S E +E+        F+ G+PPHGG   G+ R++ML
Sbjct: 348 EISTGAQREHRVETIEQQAREKGLSVEELEDVLAF----FRYGVPPHGGFGMGLARVLML 403

Query: 550 LLGAKNVREVS 560
           +L   N+RE +
Sbjct: 404 MLHLSNLRETT 414


>gi|281210408|gb|EFA84574.1| leucyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 594

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/342 (18%), Positives = 127/342 (37%), Gaps = 27/342 (7%)

Query: 6   THSCGDLGVS---------DVGSFVRLSGWVHRVR-PHGGIIFLDIR-DHYGITQVVANP 54
           TH+  D                  V ++G +  VR     + F+DI  D + +  +    
Sbjct: 119 THTVADFRKQFESIATGSKQTDINVTVAGRIKSVRISSSKLAFIDIISDGHSLQIM---A 175

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D   +E      +       G ++  +   I A    G++ +  ++I +L+         
Sbjct: 176 DLKQYEDPTKYSTTITTIRKGDIIEING--IPAKTKVGELSIVPREIVLLTPCLRPIPL- 232

Query: 115 FGEREYPESIRFKYRFLDLRRD--TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TA 171
              R   + +R++ R LD   +   +    + R+R+I+ +R  ++   F+E  TPIL T 
Sbjct: 233 ---RLMNKEVRYRKRHLDFLVNGSQIRNAFIIRSRMISFLRNYLVERGFLEVDTPILSTN 289

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                A+ F   S       + L  +P+ Y + L+ SGFD+ F+I   FR+E       P
Sbjct: 290 VGGANAKPFQTYSNSLDLDMF-LRISPELYLKQLVISGFDKVFEIGKQFRNEGIDLTHNP 348

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVL-RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
            EF   ++  ++ + + ++   E++L + V++   +      +   I  D          
Sbjct: 349 -EFTTCELYQAYGDYNTMIRLTEDLLSKMVYDAVGSYKIPLPSNNDITIDFTPPFNKIHF 407

Query: 291 -PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
            P +   I     ++   +       KI   N          
Sbjct: 408 IPKIEEFIGKKLPSDLVSYDCIPELIKICKENGVNYSAPFTP 449



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++L   G E+ +     +        F      ++  ++       G   A + G+P
Sbjct: 492 TERFELFVGGKELVNAYSELNDPVDQRSRFMAQSNDRQTGDDEAQILDEGYCNAMEYGLP 551

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P GG   GIDR+VML+    ++++V +FP  +
Sbjct: 552 PTGGWGLGIDRLVMLVSNNVSIKDVIMFPTMK 583


>gi|255349179|ref|ZP_05381186.1| lysyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503716|ref|ZP_05382106.1| lysyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255507397|ref|ZP_05383036.1| lysyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525825|emb|CBJ15306.1| lysyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435405|gb|ADH17583.1| lysyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296439122|gb|ADH21275.1| lysyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 526

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/314 (19%), Positives = 123/314 (39%), Gaps = 40/314 (12%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-------------IAKSVR 66
            VR +G +   R  G   F  I D+    QV+ N + +                I K + 
Sbjct: 66  KVRFAGRLVLFRSMGKNAFGQILDNDAKIQVMFNRNFSAVAGLAADAGISPIKFIEKKLD 125

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +L ++G +             +G++ +  + + +L  +  + LP        + IR+
Sbjct: 126 LGDILGLEGYLFFT---------HSGELTVLVETVTLLCKSL-ISLPDKHAGLADKEIRY 175

Query: 127 KYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+ DL   + + K  + R+RI+  +R  M  ++F+E  TPIL            V + 
Sbjct: 176 RKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQTIYGGAEATPFVTTL 235

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               +   L  + +   + L+  G  R ++I   FR+E       P EF  ++   ++ +
Sbjct: 236 QALHAEMFLRISLEIALKKLLVGGMSRVYEIGKVFRNEGIDRTHNP-EFTMIEAYAAYWD 294

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNN---------------FLRICYDDAIRRYGTDK 290
            +D++  +EN++  +    +NG T                   ++R+   ++I  YG   
Sbjct: 295 YNDVMKCVENLVEYIVRALNNGETQVQYSHLKSGPQVVDFKAPWIRMTMKESISVYGGVD 354

Query: 291 PDLRNPIIMHNVTE 304
            DL     +  + E
Sbjct: 355 VDLHADHELRKILE 368



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 43/129 (33%), Gaps = 18/129 (13%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDL-------LSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           K+   H+           L+   L             +++  C G E+ +     +    
Sbjct: 398 KLIAPHHIT------DHPLETTPLCKTLRSGDETLVERFESFCLGKELCNAYSELNDPLQ 451

Query: 504 M-----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
                  Q                     A   GMPP GG   GIDR+VM+L  A ++R+
Sbjct: 452 QRKLLEEQMRKKALNPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMMLTDAASIRD 511

Query: 559 VSLFPMSQN 567
           V  FP+ + 
Sbjct: 512 VLFFPVMRR 520


>gi|50552310|ref|XP_503565.1| YALI0E05005p [Yarrowia lipolytica]
 gi|49649434|emb|CAG79146.1| YALI0E05005p [Yarrowia lipolytica]
          Length = 585

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 66/300 (22%), Positives = 111/300 (37%), Gaps = 23/300 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
              + G  V+L GWVHR+R   G+ FL +RD  G  Q V   D A     +++  E  + 
Sbjct: 155 TTENRGPRVKLFGWVHRLRTQKGVAFLVLRDGTGYLQCVLQGDLANAFQTQNLTLESSVA 214

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YPESIRFKYRF 130
           I G +              G  EL     EI+ +A      +  + +     S    YR+
Sbjct: 215 IYGTLKEVPEGAR----APGGHELVVDFYEIIGLAPSGDDAITNKVQEGADPSYLLDYRY 270

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L +R +TL   +  R   + S+R         E + P +  +  EG           + +
Sbjct: 271 LTVRGETLSAVMKVRASFLRSIRRVYDELGMTEITPPCMVQTQVEGGSTLFALDYYGEKA 330

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           +  L Q+ Q Y + ++ S  D  + IA  FR E   + R   E+  ++ E+ F++ +  L
Sbjct: 331 Y--LTQSSQLYLETVIPSVGD-AYCIAESFRAERSHTRRHLSEYTHIEAELGFLDFETFL 387

Query: 251 NTMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
             +E VL    +                         F+R+ Y DA+             
Sbjct: 388 EHIEEVLCRTVDYVLADPVAGPLVQELNPGFKAPERPFMRMPYVDALEWLNEHNIPNEEG 447



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R    + ++  F   GI        +       + G  PHGG   G 
Sbjct: 502 LMPNVGEITGGSMRIDDLDELMAGFKREGIDTAP----YDFFIDLRKYGTFPHGGYGLGT 557

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +RI+  L     VRE SL+P     C  
Sbjct: 558 ERILAWLCDRFTVRECSLYPRFTGRCKP 585


>gi|328860147|gb|EGG09254.1| hypothetical protein MELLADRAFT_34607 [Melampsora larici-populina
           98AG31]
          Length = 432

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 111/263 (42%), Gaps = 31/263 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++ GWV  +R    I FL++ D      +    +            +      G  +  
Sbjct: 1   IKVQGWVKSIRNQKSISFLELVDGSCSNHLQIILNPH----------QSHGIQTGSSLKV 50

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT--L 138
             + + +  I    EL   +IE++        P+  +     S+ F  + L LR  T  +
Sbjct: 51  IGKLVKSKGIQQGKELKCDEIEVVGKCSADLYPLQKK---DHSLGFLRQHLHLRTRTGLM 107

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL----------VPSRVNQ 188
              +  R+R+ +     + + +F +   P+++ +  EGA +            V   V+ 
Sbjct: 108 SSVLRLRSRMSDQASSYLNSLDFFKTDPPMISFNDCEGAGEVFRIQTDQPSTQVSKNVDD 167

Query: 189 GSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             F+  P     + Q Y +   A G  R + + PCFR E  +++R   EF+ L++E+SF 
Sbjct: 168 LEFFNQPAYLSVSSQLYLE-AFAHGLGRVYTLGPCFRAESSQTNRHLAEFWMLEVEVSFC 226

Query: 245 EQ-DDILNTMENVLRGVFEEFSN 266
           E+ ++++  +E +++ +  E S+
Sbjct: 227 EELEEMMRLVERLIKFIGLEVSD 249



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 84/234 (35%), Gaps = 38/234 (16%)

Query: 339 AFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDS 398
           +FC+ + E  R      L     +         +  V K   +   ++ +++ ++Q    
Sbjct: 224 SFCEELEEMMR------LVERLIKFIGLEVSDELESVWKSQGLEKKKSDKIKEELQTRCP 277

Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE------FCWIMDFPFYEWNEEEKKI 452
                 +     +  +         LG  +             +I D+P        K+I
Sbjct: 278 RISYKEEEDVVGNRLSKV--EWGDSLGSEHEKWLAGVYFKSPVFITDYP--------KRI 327

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNV 511
                PF M       LK +D  ++    +DL+  G  E+  G +R    E + +     
Sbjct: 328 K----PFYM-------LKNSDQQTVAC--FDLIVPGIGELVGGSLREFNEERLRENVEEK 374

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G+    ++ +    +   + G  PH G   G DR+V  + G +NVREV  FP +
Sbjct: 375 GMD--GMDGKLDWYFDLRRFGTNPHAGFGIGWDRLVCWISGIENVREVIGFPRT 426


>gi|332814503|ref|XP_003309311.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic [Pan troglodytes]
          Length = 401

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 77/326 (23%), Positives = 134/326 (41%), Gaps = 43/326 (13%)

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-- 117
           + A ++  E ++ I+G+V  R       +     +EL  QKI ++S+AE        +  
Sbjct: 3   KFAANINKESIVDIEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAV 60

Query: 118 -----------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                          +  R   R +DLR  T       ++ I +  R  +I + F+E  T
Sbjct: 61  RPEAEGEEEGRATVNQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQT 120

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P + +++ EG  +    S     ++ A  Q+PQ YKQ+ + + F++ F I P FR ED  
Sbjct: 121 PKIISAASEGGANVFTVSYFKNNAYLA--QSPQLYKQMCICADFEKVFSIGPVFRAEDSN 178

Query: 227 SDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLRGVFEEFS------NGNTVSNNF- 274
           + R   EF  LD+EM+F        ++I +TM  + +G+ E F       N       F 
Sbjct: 179 THRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFK 238

Query: 275 -----LRICYDDAIRRY------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSV 320
                LR+ Y +A+           D+ DL  P    + ++ +    ++F +  K  L+V
Sbjct: 239 FLEPTLRLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTDFYILDKYPLAV 298

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNE 346
            P Y +          +     R  E
Sbjct: 299 RPFYTMPDPRNPKQSNSYDMFMRGEE 324



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 245 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 294

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 295 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 345

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 346 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 401


>gi|156305178|ref|XP_001617534.1| hypothetical protein NEMVEDRAFT_v1g226003 [Nematostella vectensis]
 gi|156194390|gb|EDO25434.1| predicted protein [Nematostella vectensis]
          Length = 267

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 53/242 (21%), Positives = 100/242 (41%), Gaps = 22/242 (9%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           +Y  +S   L    +   V ++G V   R      F  ++D  G  Q   N ++  F  A
Sbjct: 46  KYGDYSKEALEAEKI--TVSIAGRVMLNRGS----FGVVQDMSGRIQFYVNKEARAF--A 97

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           K +    ++ + G +              G + +   + ++L+ +   PLP   +     
Sbjct: 98  KELDLGDIIGVKGQLHKSGK---------GDLYVDLGEYQLLTKSLR-PLPDKHKGLQDT 147

Query: 123 SIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
            +R++ R++DL  +   + +   R +I+  +R  +    F+E  TP+L        AR F
Sbjct: 148 EMRYRQRYVDLITNEQSRKVFEARVKIVAGIRKYLADRRFMEVETPMLQVIPGGASARPF 207

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          Y L  AP+ Y + L+  GF+R F+I   FR+E   +   P EF  ++  
Sbjct: 208 ITHHNALDRDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNP-EFTMIEFY 265

Query: 241 MS 242
            +
Sbjct: 266 QA 267


>gi|323308044|gb|EGA61297.1| Dps1p [Saccharomyces cerevisiae FostersO]
          Length = 557

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 66/284 (23%), Positives = 109/284 (38%), Gaps = 25/284 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACF------EIAKSVR 66
             D    V     VH  R  G  + FL +R    + Q +   +          + A S+ 
Sbjct: 102 AKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLJQGLVKANKEGTISKNMVKWAGSLN 161

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
            E ++ + G+V        +A +    +E+   KI  +S   E    +  +    E    
Sbjct: 162 LESIVLVRGIVKKVDEPIKSATV--QNLEIHITKIYTISETPEALPILLEDASRSEAEAE 219

Query: 123 ---------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                      R  YR +DLR  T       +  +    R  +  + F E  TP L  + 
Sbjct: 220 AAGLPVVNLDTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLLGAP 279

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG       +     ++ A  Q+PQ  KQ L+ + F+R ++I P FR E+  + R   E
Sbjct: 280 SEGGSSVFEVTYFKGKAYLA--QSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRHMTE 337

Query: 234 FYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           F  LDMEM+F E   ++L+T+  +   +F E           +R
Sbjct: 338 FTGLDMEMAFEEHYHEVLDTLSELFVFIFSELPKRFAHEIELVR 381



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 46/119 (38%), Gaps = 12/119 (10%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K      PF TMP                +  YD    G EI SG  R H   ++ +   
Sbjct: 447 KFPLEIRPFYTMPDPANPKY---------SNSYDFFMRGEEILSGAQRIHDHALLQERMK 497

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             G+S E  +         F  G PPH G   G++R+VM  L  KN+R  SLFP     
Sbjct: 498 AHGLSPE--DPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRDPKR 554


>gi|256826236|ref|YP_003150196.1| lysyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256689629|gb|ACV07431.1| lysyl-tRNA synthetase (class II) [Kytococcus sedentarius DSM 20547]
          Length = 520

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/271 (21%), Positives = 108/271 (39%), Gaps = 20/271 (7%)

Query: 5   RTHSCGDLGVS----DVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  ++       + G      V ++G V   R  G + F  ++   G          
Sbjct: 56  RTHSLEEVREQWGHLETGEETQDVVSVTGRVVFSRNTGKLCFATLQAGTG---ERLQAML 112

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +  E+ +    EW   ID G ++S +   I +    G++ + A   ++ S A      + 
Sbjct: 113 SLAEVGQEALDEWKSLIDLGDIVSVTGRVICSR--RGELSVMATDWQLASKALRPLPTL- 169

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
             ++  E  R + R+ DL  RD   + ++ R+ I +++R  +    ++E  TP+L     
Sbjct: 170 -HKDLSEEQRVRQRYADLIVRDEARRMVLTRSLITSTVRRFLEERGYVEIETPVLQLIHG 228

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F             L  A +   +  +  G ++ F+I   FR+E   S   P E
Sbjct: 229 GALARPFTTHLNAFNQDM-TLRIALELNLKKAVVGGVEKVFEIGRIFRNEGVDSTHSP-E 286

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           F  L+   ++ +Q  +   M+ +   V +  
Sbjct: 287 FTMLEAYEAWGDQTTMAELMQEMYLVVADAL 317


>gi|85096905|ref|XP_960347.1| hypothetical protein NCU07082 [Neurospora crassa OR74A]
 gi|28921835|gb|EAA31111.1| hypothetical protein NCU07082 [Neurospora crassa OR74A]
          Length = 915

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/361 (16%), Positives = 132/361 (36%), Gaps = 28/361 (7%)

Query: 15  SDVGSFVRLSGWVHRVRP-HGGIIFLDIRDH-YGITQVVANPDSACFE----IAKSVRSE 68
            ++G  V     VH VR     + F+  RD    +  V++  D    E     A+ + +E
Sbjct: 111 QNIGKTVSFRARVHHVRALSSKLAFVVFRDQIETVQGVLSVRDGVVSENFVRWAEHITAE 170

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL---PVFGEREYPES-- 123
             + ++G +     E     I    +E+    + ++   +E            E      
Sbjct: 171 SFVHVEGKLQQPPEEIKGCTIHN--VEVLIDTMHLVVPIDEHLPVDVHSIDHVEVDSETN 228

Query: 124 ---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                    +R   R   LR  T          I +  R  +  + F+E  TP L  ++ 
Sbjct: 229 QLESLASTRVRVSNRIAFLRTPTAQSIFRINAGICSIFRRYLEDKGFMEIHTPKLQPAAT 288

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           E   +    +   + +F A  Q+PQ  KQ+ +++ F R F+I P FR ED  + R   E+
Sbjct: 289 ESGAEVFKVNYFGRTAFLA--QSPQLAKQMSISADFGRVFEIGPVFRAEDSNTHRHLTEY 346

Query: 235 YQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
             +D+EM+   +  + ++ ++ +++ +F+            ++  +      +  + P +
Sbjct: 347 TGMDLEMAIEQDYHEAMHIIDGLMKEIFKGIYGKYRKEIEIIKTRFPHEDLVWLPETPII 406

Query: 294 RNPIIMHNVTE---HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
                +  + +      H    + ++ LS     ++  +  +    +    D+     R 
Sbjct: 407 PFKDAIKLLNDSGWTDDHGRPALETEDLSTRAEIQLGQVIKEKYKTDYYIIDKFPSSVRP 466

Query: 351 Q 351
            
Sbjct: 467 F 467



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 68/192 (35%), Gaps = 29/192 (15%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF-CWI 437
           L        +  + + +        G P       +  R  I  +LG +    ++   +I
Sbjct: 400 LPETPIIPFKDAIKLLNDSGWTDDHGRPALETEDLS-TRAEI--QLGQVIKEKYKTDYYI 456

Query: 438 MDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           +D           K   +  PF T      +    +         +D+   G EI +GG 
Sbjct: 457 ID-----------KFPSSVRPFYTHLDPEDDRFTNS---------FDIFLRGQEITTGGQ 496

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H   ++ +     GI    ++       + F+ G+ PH G   G++RIV LLL   ++
Sbjct: 497 RIHRPHLLEERMKKAGIEPLGMQE----YLQGFEYGVLPHAGCGIGLERIVFLLLNLGDI 552

Query: 557 REVSLFPMSQNF 568
           R  SL P     
Sbjct: 553 RNASLIPRDPKS 564


>gi|297802914|ref|XP_002869341.1| hypothetical protein ARALYDRAFT_491623 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315177|gb|EFH45600.1| hypothetical protein ARALYDRAFT_491623 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 557

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 70/329 (21%), Positives = 122/329 (37%), Gaps = 31/329 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDS------ACFEI 61
             DL    V S V + G VH  RP    + FL +R+     Q V              + 
Sbjct: 97  VSDLVEEMVESEVLIRGRVHINRPTSSKLGFLILRESGSTVQCVVRQSEKTKVGANMVKY 156

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-------------- 107
           ++ +  E  + + G+V+            T Q+E+  +K+  ++ A              
Sbjct: 157 SEQLSRESFVDVIGVVVLPKEPLTGT---TQQVEIQVRKVYCINKALAKLPLSVEDAARS 213

Query: 108 ----EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
               E+            +  R  +R LDLR          + ++ NS R ++I ++F+ 
Sbjct: 214 EADIEKSLQTEKPAARVNQDTRLNHRVLDLRTPANQAIFRLQCQVENSFREKLIFKDFVG 273

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             TP L A S EG           +G    L Q+PQ +KQ+ +     R F++ P FR E
Sbjct: 274 IHTPKLMAGSSEGGSAVFRLEY--KGQPACLAQSPQLHKQMAICGDLRRVFEVGPVFRAE 331

Query: 224 DPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           D  + R   EF  LD+EM       +I++ ++ +   +F   +         +R  Y   
Sbjct: 332 DSFTHRHLCEFVGLDVEMEIRKHYSEIMDLVDELFVFIFTSLNEKCKKELEAVRKQYPFE 391

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             ++      L     +  + E  V  + 
Sbjct: 392 PLKFLPKTLRLTFEEGVQMLKEAGVEVDP 420



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 80/234 (34%), Gaps = 28/234 (11%)

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           R     + +           +IF  L+E      +  V K       + +   L +   +
Sbjct: 352 RKHYSEIMDLVDELF----VFIFTSLNEKCK-KELEAVRKQYPFEPLKFLPKTLRLTFEE 406

Query: 398 SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN 457
               +    ++      D      ++LG +    +      +F          +   A  
Sbjct: 407 GVQMLKEAGVEV-DPLGDLNTESERKLGQLVLEKYN----TEFYILH------RYPKAVR 455

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           PF         L         +  +D+   G EI SG  R H+ E++ Q     GI  + 
Sbjct: 456 PFYTMTCADNPL--------YSNSFDVFIRGEEIISGAQRVHIPEILEQRAGEFGIDVKT 507

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +         +F+ G PPHGG   G++R+VML  G  N+R+ SLFP        
Sbjct: 508 IST----YIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLFPRDPQRLAP 557


>gi|46446862|ref|YP_008227.1| lysyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25]
 gi|46400503|emb|CAF23952.1| probable lysyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 529

 Score =  158 bits (400), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 63/340 (18%), Positives = 129/340 (37%), Gaps = 29/340 (8%)

Query: 4   YRTHSCGDLGVSDVGSF--VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD------ 55
           Y T   G    +  GS   V L+G +   R  G   F  ++D  G  Q++ N D      
Sbjct: 51  YDTKQIGHSEDAASGSTPFVCLAGRLVLFRSMGKNAFGHLQDETGRIQIMFNRDQTLVTN 110

Query: 56  -SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                E  +    +++     L      E    +   G++ +  +++ +L          
Sbjct: 111 FEPSSEEPELSPYKFIEKKIDLGDIIGVEGYLFHTQKGELTVFVKQLTLLCKTLLPLADK 170

Query: 115 FGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            G     + +R++ R+LDL     + K    R+ I+  +R       F+E  TPIL +  
Sbjct: 171 HG-GLADKELRYRKRWLDLISHLDVAKVFRIRSHILKEIRSYFDQYQFLEVETPILQSIY 229

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F+          + L  + +   + L+  G  + +++A  FR+E    +  P 
Sbjct: 230 GGAEARPFITKLNALDQEMF-LRISLEIPLKKLIVGGMHKVYEMARVFRNEGIDRNHNP- 287

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------------NFLRI 277
           EF  L+   S+ +  D++N +EN+   +  +      V                  ++R+
Sbjct: 288 EFTLLEAYASYWDYFDMMNFVENLFEKLALDLYGTTKVPYTAHEGAETIYIDMKAPWIRL 347

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
              ++I++Y    P++ +   M ++     H + +    +
Sbjct: 348 TMKESIKKYANLDPNVLSDEEMRHLLLESAHCDPKKIKGL 387



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 45/129 (34%), Gaps = 7/129 (5%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            +E   E   I   H   +P                      +++      E+ +     
Sbjct: 396 LFEVFVEPHLIQPHHIYDHPIETTPLCKPHRDLKYREEGLVERFESFILTQEVCNSYSEL 455

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +  E+           +E  +     L      A   GMPP GGI  GIDR+VM+L  + 
Sbjct: 456 NDPEIQRHLLELQSDRREAGDEEASPLDEEFIEAICQGMPPTGGIGIGIDRLVMILTNSH 515

Query: 555 NVREVSLFP 563
           ++R+V  FP
Sbjct: 516 SIRDVLYFP 524


>gi|116789233|gb|ABK25168.1| unknown [Picea sitchensis]
          Length = 566

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 63/290 (21%), Positives = 114/290 (39%), Gaps = 30/290 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPD-----SACFEIA 62
            G L        + + G  H +R     + FL +R+     Q V N +         +  
Sbjct: 107 VGSLMDELKDQQILVRGRAHAIRGVSSKMAFLVVREAGYTVQCVLNVNPGVVSKGMVKFV 166

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----- 117
             +  E ++ ++G+V   +   I     + Q+E+  +K+  +S ++        +     
Sbjct: 167 TGLSKESIVDVEGIV---TVPNIAITGASQQVEIHVRKVYCVSKSQPTLPINLEDAARSE 223

Query: 118 -------------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
                            +  R  YR LDLR          ++ +    R  +I+E F+E 
Sbjct: 224 KEFEKAEQTGEHVVRVGQDTRLNYRVLDLRTPANQGIFRVQSYVSMLFRQFLISEGFVEL 283

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP L A + EG           +G    L Q+PQ +KQ+ + + F R F+I P FR ED
Sbjct: 284 HTPKLIAGASEGGSSVFKLDY--KGQPACLAQSPQLHKQMAICADFGRVFEIGPVFRAED 341

Query: 225 PRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNN 273
             + R   EF  LD+EM   E   ++L+ ++ +   +F+  +       +
Sbjct: 342 SFTHRHLCEFTGLDLEMEIKEHYFEVLDILDKLFITIFDGLNEHCKKELH 391



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 71/202 (35%), Gaps = 23/202 (11%)

Query: 370 AGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINC 429
             +  + +       + +R  L +   +    +    ++      D      ++LG +  
Sbjct: 388 KELHAINQQYPFEPLKYLRKTLRLTFQEGVQMLKEAGIEV-DPLGDFNTETERKLGGLVR 446

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
             ++     DF          +   A  PF       + L         +  +D+   G 
Sbjct: 447 EKYD----TDFYILH------RYPLAVRPFYTMPCIDDPL--------YSNSFDVFIRGE 488

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI SG  R H  E + +    +GI    +         +F+ G  PHGG+  G++R+VML
Sbjct: 489 EIISGAQRVHEPEFLTKRAKELGIDVNTIST----YIDSFRWGAVPHGGLGVGLERVVML 544

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
                N+R+ SLFP        
Sbjct: 545 FCALNNIRKTSLFPRDPQRLAP 566


>gi|83033003|ref|XP_729287.1| aspartyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23486621|gb|EAA20852.1| aspartyl-tRNA synthetase, putative [Plasmodium yoelii yoelii]
          Length = 681

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 73/314 (23%), Positives = 127/314 (40%), Gaps = 24/314 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQV----VANPDSACFEIAKSVRS 67
              + GS + + G +H +R  G + F+ +R+  Y +  +      N D    +   ++  
Sbjct: 227 NKLEEGSNIWVRGRIHDIRSKGSLAFIILRNKIYSLQCILDIKNVNNDKNMIKWVSNLSL 286

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV-----------AEELPLPVFG 116
           E ++ I G ++     +I++ II  + E+   KI  +S            A         
Sbjct: 287 ESIVDIYGKLVK-PEISIDSTII--KYEIQILKIFCISKNSKELPFLLKDANMKETSDEA 343

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                +  R   R +DLR    +     ++ I    R  +I  NF E  TP L   S EG
Sbjct: 344 TIRVNQDNRLNNRCIDLRTYANYSIFYLQSEICKIFRNYLIDNNFTEIHTPKLLGESSEG 403

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +    +  NQ  F A  Q+PQ YKQ+ + SGFDR F+IAP FR E+  + R   E+  
Sbjct: 404 GANAFQINYFNQNGFLA--QSPQLYKQMCINSGFDRVFEIAPVFRAENSNTYRHLCEYVS 461

Query: 237 LDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT--DKPDL 293
           LD+EM++  +  + +   +++ + +F +  N          I        +      P  
Sbjct: 462 LDVEMTYKYDYMENVYFYDSMFKNIFNKLINNEKNKLFIKNIKNQYPSEDFKWLAVTPIF 521

Query: 294 RNPIIMHNVTEHFV 307
                +  + EH  
Sbjct: 522 TYEQAIKLLIEHKK 535



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 54/154 (35%), Gaps = 26/154 (16%)

Query: 420 IAQELGIINCNCFE--FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           + +ELG I     +  +  I++FP                PF             D    
Sbjct: 552 MEKELGKIIKQTHDTDYYIIINFP------------SGLRPFYTMYNE------KDPK-- 591

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD    G EI SG  R    +++L       +       +      +F     PH 
Sbjct: 592 ISNSYDFFMRGEEILSGSQRISDVKLLLDNIKKFNLDP----KKLDFYIDSFAYSSYPHS 647

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   G++R++ML LG  N+R+ SLFP        
Sbjct: 648 GCGIGLERVLMLFLGLNNIRKTSLFPRDPKRLTP 681


>gi|255564914|ref|XP_002523450.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223537278|gb|EEF38909.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 540

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 65/329 (19%), Positives = 120/329 (36%), Gaps = 30/329 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHY----GITQVVAN-PDSACFEIA 62
            G L        + + G     R  G  + F+ +R        +  V A+       +  
Sbjct: 81  VGQLNEELKDKELLIRGRAQTTRAVGKNMAFVVVRQKGFTVQCVVTVQADLVSRQMVKFV 140

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----- 117
             +  E ++ + G+V   S         T Q+E+  +K+  +S A         +     
Sbjct: 141 AGLSRESIVDVRGVV---SVPNSPIKGTTQQVEVQVRKLYCISKAIPTLPINIEDAARSE 197

Query: 118 -------------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
                            +  R  YR LD+R          ++ + N  R  +++E+F E 
Sbjct: 198 KEIEEALQRGEQFVRVNQDTRLNYRVLDMRTPANQGIFRIQSEVGNIFRQFLLSEDFDEI 257

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP L A S EG           +G    L Q+PQ +KQ+ +    +R F++ P FR ED
Sbjct: 258 HTPKLIAGSSEGGSAVFKLDY--KGQPACLAQSPQLHKQMAICGDKERVFEVGPVFRAED 315

Query: 225 PRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
             + R   EF  LD+EM   +   ++++ ++ +   +F+  +       + +   Y    
Sbjct: 316 SYTHRHLCEFVGLDVEMEIKKHYSEVMDIVDRLFVKMFDYLNEKCKKELDAVCRQYPFEP 375

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            +Y      LR    +  + E  V  +  
Sbjct: 376 LKYLRKTLRLRFEEGIQMLKEAGVEVDPY 404



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 19/127 (14%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           +   A  PF TMP                +  +D+   G EI SG  R H+ E++ +   
Sbjct: 432 RYPLAVRPFYTMPCYDDAKY---------SNSFDVFIRGEEIISGAQRVHVPELLEERAK 482

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             GI    +         +F+ G PPHGG   G++R++ML  G  N+R+ SLFP      
Sbjct: 483 ACGIDVSTIST----YIDSFRYGAPPHGGFGVGLERVIMLFCGLNNIRKTSLFPR----- 533

Query: 570 DLLMGSP 576
           D +  +P
Sbjct: 534 DPMRIAP 540


>gi|88854781|ref|ZP_01129447.1| lysyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88815942|gb|EAR25798.1| lysyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 499

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 55/265 (20%), Positives = 110/265 (41%), Gaps = 12/265 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT           G  V L+G +  +R  G + F  ++   G          +  E+ + 
Sbjct: 51  RTKYPSLEADQTTGDVVGLAGRIVHLRNTGKLCFASLQSGDG---ERIQVMVSLGEVGED 107

Query: 65  VRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             + W   +D G  +  S E I++    G++ +  +  +I S A  +       ++  + 
Sbjct: 108 SLALWKEVVDLGDHLFVSGEIISSR--RGELSVMVKDWKIASKA--VLPLPNLHKDLSDE 163

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL 181
            R + R+LDL      +  V+ R ++  S+R    A +++E  TP+L T      AR F+
Sbjct: 164 QRVRSRYLDLIVREQARFTVRARAKVNASLRATFAAHDYLEVETPMLQTMHGGASARPFV 223

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
             S       Y L  AP+ + +  +  G +R F+I   FR+E   S   P EF  ++   
Sbjct: 224 THSNAFDIELY-LRIAPELFLKRAVVGGIERAFEINRNFRNEGADSTHSP-EFAMVEAYQ 281

Query: 242 SFVEQDDILNTMENVLRGVFEEFSN 266
           ++ + + + +  + +++      + 
Sbjct: 282 AYGDYNQMADLTQELVQNSALAVAG 306



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 7/114 (6%)

Query: 456 HNPFTMPQGGMESLKGNDLLSIKA--FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
           H  F M      S    D  SI+    ++DL   GFE+A+G        +  + F    +
Sbjct: 384 HPTFVMDFPVDTSPLVRDHRSIEGVVEKWDLYVRGFELATGYSELVDPVIQRERFVEQAL 443

Query: 514 SKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                +           RA + GMPP GGI  G+DR++M + G   +RE  LFP
Sbjct: 444 LASQGDVEAMRLDEDFIRALEHGMPPTGGIGVGVDRLLMAITGLG-IRETILFP 496


>gi|325283162|ref|YP_004255703.1| Asparaginyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314971|gb|ADY26086.1| Asparaginyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 443

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 91/259 (35%), Gaps = 14/259 (5%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLC 72
            +G  V L+ W+      G I FL +RD  G  Q      +     FE AK +  E  L 
Sbjct: 9   HIGETVTLTVWLQDKSGKGKIQFLKLRDGSGFVQGTVFKGDVSEEVFEAAKRLSQEQSLT 68

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G V +              +E+S + +  LS  E +       +E+       +R L 
Sbjct: 69  LTGEVRADER-------APSGVEISVRDLSPLS--EVVGEYPITPKEHGIDFLLDHRHLW 119

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R       +  R  + + +      E F     P  T ++ EG  +        +   Y
Sbjct: 120 FRHRRPWAVMRVRDCVQSGIVEFFRQEGFTRFDAPFFTPNAAEGTTELFEIDLFGEDKAY 179

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q  Q +     A  F + +   P FR E  ++ R   EF+ ++ E++     D ++ 
Sbjct: 180 -LSQTGQLH-AEAGALAFGKVYTFGPTFRAEKSKTRRHLLEFWMVEPEVAPATHQDNMDL 237

Query: 253 MENVLRGVFEEFSNGNTVS 271
            E  +  +     +     
Sbjct: 238 QERFVSFLVRRVLDECRQE 256



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 37/115 (32%), Gaps = 10/115 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   +   F M     +         I    Y       EI  G  R H  +++ +    
Sbjct: 333 RYPASFKAFYMQPDPADPRLALCDDMIAPEGY------GEIIGGSERIHDFDLLKERIEG 386

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G+        F       + G  PH G   G++R +  + G  ++RE   FP  
Sbjct: 387 EGLPL----EAFEWYLDLRRYGSVPHAGFGMGLERFIAWMTGIDHIREAIPFPRM 437


>gi|33519875|ref|NP_878707.1| asparaginyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|59798582|sp|Q7VR09|SYN_BLOFL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|33504220|emb|CAD83483.1| asparaginyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 470

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 96/276 (34%), Gaps = 28/276 (10%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCID 74
            + + L GW+   R     I FL++ D   +   Q+V   +   +E      ++ +    
Sbjct: 18  NTEITLYGWIRTRRHSKTKITFLNLYDGSCLESLQIVVKNNLHNYE------TDILKLTT 71

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G  +       N+     +IEL A  I++L   +         +++          L  R
Sbjct: 72  GCSIIAKGYITNSLGTKQRIELIATYIQVLGWIDNPSTYPITTKKHSMEYLRNVAHLRPR 131

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS---- 190
                     R  +  S+   M  + FI   TPI+TAS  EG       S +   S    
Sbjct: 132 THIFGAISRIRHVLFQSIHNLMNTKGFIWVPTPIITASDTEGNSKMFYVSELLNNSKKSQ 191

Query: 191 ------------FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+   A      Q      A    + +   P FR E   ++R   EF+
Sbjct: 192 NICNSHQKIPELFFGKEAFLTVSGQLNVESYACALTKVYTFGPTFRAEHSNTNRHLAEFW 251

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
            L+ EM+F + + I+   +++L+ + +         
Sbjct: 252 MLEPEMAFTDLNIIIKIADSLLKDIVQTILEQCIND 287



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 4/85 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R     ++ +      +        +       + G  PH G   G 
Sbjct: 387 LVPGIGEIIGGSQREERLSILDKRLLENNLKT----ECYWWYRDLRRYGTVPHSGFGLGF 442

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNF 568
           +R+++ + G  N+R+   FP + N 
Sbjct: 443 ERLIIYITGLTNIRDAVPFPRTINS 467


>gi|291528245|emb|CBK93831.1| aspartyl-tRNA synthetase, archaeal type [Eubacterium rectale
           M104/1]
          Length = 443

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 74/307 (24%), Positives = 113/307 (36%), Gaps = 19/307 (6%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L     G  +++ G +H +R  G + F+ +R   G+ Q V  P  + F +   ++    +
Sbjct: 19  LAGDYEGKNIKVKGAIHTIRDMGEVAFIVLRRRDGLIQCVYEPGKSRFSV-DDLKEADTV 77

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLP-VFGEREYPESIRFKYR 129
            + G   S               EL    I ILS  AE +PL     +       +   R
Sbjct: 78  EVCGTYKSDDRS-------PNGFELRLDTITILSEPAEPMPLQINKWKLNTSLEAKLNNR 130

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            + LR          +  I    R  +    F E  TP L A S EG  +       ++ 
Sbjct: 131 AVALRNPRERATFRIQEGITRGFRDFLYNNGFTEIHTPKLGAKSAEGGANLFKLEYFHRP 190

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDD 248
           +   L Q+PQ YKQ +M   FDR F+ AP FR E   + R   E+  LD EM +++  +D
Sbjct: 191 AI--LQQSPQFYKQ-MMVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFED 247

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I+      L+   E            L+I   D         P +R       V E +  
Sbjct: 248 IMEMETGFLQYTMELLKTSYAKELELLKIKLPDV-----ASIPRVRFDEAKQRVAEKYNR 302

Query: 309 SEFRVFS 315
                F 
Sbjct: 303 QFRNPFD 309



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF            +         +DL+  G EI 
Sbjct: 329 DFVFVTHYP------------SKKRPFYAM--------DDPADETYTLSFDLLFRGLEIT 368

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H    +++  +  G+  E +E+       AF+ GMPPHGG+  G++R+ M L+G
Sbjct: 369 TGGQRIHDYNKLMEKIAKRGMETEGMES----YLSAFKYGMPPHGGLGIGLERLTMQLIG 424

Query: 553 AKNVREVSLFPMSQNFCDL 571
             NVRE +LFP   +  + 
Sbjct: 425 EDNVREATLFPRDLSRLEP 443


>gi|82915420|ref|XP_729064.1| lysyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23485895|gb|EAA20629.1| lysyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 579

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 63/348 (18%), Positives = 127/348 (36%), Gaps = 15/348 (4%)

Query: 1   MHRYRTHSCGDLGVSDVGSFV-RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSAC 58
           + +Y+    G+     +   +  ++G + RV   G  + F D+       QV+AN     
Sbjct: 112 IEKYKDLQNGE----HLEETILNMTGRIMRVSSSGQKLRFFDLVGDGKRIQVLANYSFHD 167

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E +  V     +    +V              G++ +  ++  +LS    +    +G +
Sbjct: 168 KEKSNFVECYDKIKRGDIV---GIIGFPGKSKKGELSIFPKETIVLSPCLHMLPMKYGLK 224

Query: 119 EYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEG 176
           +    IR++ R+LDL   ++     + RT+IIN +R  +  + FIE  TP +   +    
Sbjct: 225 DT--EIRYRQRYLDLLINESTRNVFITRTKIINFLRNFLNNQGFIEVETPSMNLMAGGAS 282

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A +   ++L+  G DR ++I   FR+E   +   P EF  
Sbjct: 283 ARPFITHHNDLDLDLY-LRIATELPLKMLIVGGLDRVYEIGKVFRNEGIDNTHNP-EFTS 340

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
            +   ++ +  D++   E     +         +  N      D     +    P +   
Sbjct: 341 CEFYWAYADYYDLIKWSEEFFSKLVYHLFGSYKILYNKDGPENDPIEIDFTPPYPKISLV 400

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
             +  +T+  +   F     I  +    +   I            D++
Sbjct: 401 EELEKITKVKLDQPFDSPETINKMINIIKENNIEMPNPPTAAKLLDQL 448



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 + ++   G E+ +     +      + F++    KE  +            + +
Sbjct: 481 KPGLTERLEMFICGKEVLNAYTELNDPFKQKECFASQQKDKEKGDTEAFHCDAAFCTSLE 540

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG+  GIDRI M L    ++++V LFP  +
Sbjct: 541 YGLPPTGGLGLGIDRITMFLTNKNSIKDVILFPTMK 576


>gi|158313365|ref|YP_001505873.1| aspartyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158108770|gb|ABW10967.1| aspartyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 433

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 77/290 (26%), Positives = 118/290 (40%), Gaps = 21/290 (7%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++  DL     G  V L+GWVHR R    + FL +RD  G  Q+V N      +I   
Sbjct: 3   RTYT-TDL-PKRAGEKVHLAGWVHRRRVLKNVTFLVLRDARGTAQIVVNEPDILSKI-SD 59

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREYPE 122
           V  E V+ IDG  ++            G +E+   +I ILS A             +   
Sbjct: 60  VTEESVVEIDGQAVANPH-------APGGVEVINPEIGILSEAVSPLPFEIFRPNLDVSL 112

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            ++  +  L LR              +   R  + +E F E  TP + ASS E   +   
Sbjct: 113 PVQLDHASLALRHPRRQAIFRLAAASVAGFREALTSEGFTEVHTPKIVASSTESGANVFG 172

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                  ++ A  Q+PQ YKQ L    F+R F++AP FR E   + R   E+  LD EM 
Sbjct: 173 IDYFGSRAYLA--QSPQFYKQTL-VGVFERVFEVAPVFRAEPHDTARHLAEYVSLDAEMG 229

Query: 243 FV-EQDDILNTMENVLRGVFEEFSNGNTVSNN-----FLRICYDDAIRRY 286
           F+ +   ++  +   +R + E+ S  +   +        RI     I  +
Sbjct: 230 FIEDHHTVIKMVSLAVRHMVEKVSATDPEESILADQTLPRIPEQIPIIHF 279



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 24/133 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P        +K  F  +P             +      +  +DL+  G E+ 
Sbjct: 319 DFLFVTGYPM-------RKRPFYTHP-------------DPARPEFSNSFDLLFRGLELV 358

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H     +QA +  G        ++      F+ GMPPHGG A G++R    L G
Sbjct: 359 TGGQRLHRYTDYVQAITLRGEDP----EKYRAYIDTFRYGMPPHGGFALGLERWTARLTG 414

Query: 553 AKNVREVSLFPMS 565
           A NVREV+LFP  
Sbjct: 415 AANVREVTLFPRD 427


>gi|301103370|ref|XP_002900771.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262101526|gb|EEY59578.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 514

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 64/277 (23%), Positives = 105/277 (37%), Gaps = 25/277 (9%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIA 62
            S  DL     G    + G +  VR    I F+ +R+      GI            + A
Sbjct: 56  KSVEDLNPELQGESFWVRGHLQAVRAKSKIAFITLREQTATIQGILHESDKVSRPMIKFA 115

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----- 117
             V  E V+ +   V     ++   +     +EL+ +K  ++S A         +     
Sbjct: 116 AGVSKESVVDV--YVTLSVPDSPVVSTTQKDVELNVEKFFVVSKALPELPFQVEDAARPD 173

Query: 118 ----------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
                            R   R LDLR       +  +  +    R  +I  NF+E  TP
Sbjct: 174 ALVKAEGSTYVNVGLETRLNSRPLDLRTPANQCIMRIQAAVSQLFREFLIQRNFVEIHTP 233

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL-LMASGFDRYFQIAPCFRDEDPR 226
            L   + E   +       +Q +  AL Q+PQ YKQ+    +G +R F+I P FR E+  
Sbjct: 234 KLVGGASESGANCFTLKYFDQDA--ALAQSPQTYKQMACAVAGLERVFEIGPVFRAENSN 291

Query: 227 SDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
           + R   EF  LD+EM+  E   ++L    ++   +F+
Sbjct: 292 THRHMCEFVGLDLEMTIKEHYHEVLEVFSDLFIYIFD 328



 Score =  100 bits (248), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 12/118 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                   +  YD++  G EI SG  R H  +++++    
Sbjct: 406 KFPLAVRPFYTMPD--------PTDKRWSNSYDMMIRGEEIVSGAQRVHDPKLLMERMDE 457

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           +G+     +        +F+ G  PHGG   G++R+VML LG  N+R+ S+FP     
Sbjct: 458 LGVP----QESMRNYIDSFRLGALPHGGGGIGLERVVMLYLGLGNIRKASMFPRDPKR 511


>gi|221052406|ref|XP_002257779.1| Aspartate--tRNA ligase [Plasmodium knowlesi strain H]
 gi|193807610|emb|CAQ38115.1| Aspartate--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 628

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 67/306 (21%), Positives = 123/306 (40%), Gaps = 24/306 (7%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-----PDSACFEIAKSVRSEWVLCIDG 75
           + + G +H +R  G + F+ +R      Q + +      D    +   ++  E ++ I G
Sbjct: 182 IWVRGRIHDIRSKGSLAFIILRQKLYSMQCILDIKNNDNDKNMMKWVSNLPLESIVDIYG 241

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSV-----------AEELPLPVFGEREYPESI 124
            +        + NI     E+  +KI  +S            A        G  +  +  
Sbjct: 242 KLTKPEVPIDSTNIK---YEVHIKKIFCISKTTKELPFLLKDANMKETNEEGSIKVNQDN 298

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R   R +DLR    +     +++I    +  ++  NFIE  TP L   S EG  +    +
Sbjct: 299 RLNNRCIDLRTYANYSIFCLQSQICTLFKNFLLKNNFIEIHTPKLLGESSEGGANAFQIN 358

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             NQ  F A  Q+PQ YKQ+ + SGFDR F++AP FR E+  + R   E+  LD+EM++ 
Sbjct: 359 YFNQKGFLA--QSPQLYKQMCINSGFDRVFEVAPVFRAENSNTYRHLCEYVSLDIEMTYK 416

Query: 245 -EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT--DKPDLRNPIIMHN 301
            +  + +   +++ + +F E + G         +        +      P       +  
Sbjct: 417 YDFLENVFFYDSLFKHIFTELTKGEKSEMLIKTVKGQYPCEDFQWLEVTPIFTYEEAIKM 476

Query: 302 VTEHFV 307
           + +H  
Sbjct: 477 LIQHNK 482



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 26/151 (17%)

Query: 420 IAQELGIINCNCFE--FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           + +ELG I        +  I++FP             A  PF                  
Sbjct: 499 MEKELGKIVKASHHTDYYIIINFP------------SALRPFYTMYKED--------NPA 538

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD    G EI SG  R     ++L+      +      ++      +F     PH 
Sbjct: 539 ISNSYDFFMRGEEILSGSQRISDVNLLLENIKRFNLDA----SKLNFYIDSFAYSSYPHS 594

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           G   G++R++ML LG  N+R+ SLFP     
Sbjct: 595 GCGIGLERVLMLFLGLNNIRKTSLFPRDPKR 625


>gi|169769410|ref|XP_001819175.1| asparaginyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
 gi|83767033|dbj|BAE57173.1| unnamed protein product [Aspergillus oryzae]
          Length = 571

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 108/284 (38%), Gaps = 23/284 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VHR+R    ++F+ + D YG  Q +   D        ++     + I G +
Sbjct: 146 GTRVRVLGRVHRLRSQKDVVFITLTDGYGYLQCILTGDMVKAYDIMTLTLGTSMSIHGEM 205

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRR 135
            +   +    N      EL A    I+  A  ++  +      +      +  R L LR 
Sbjct: 206 RAVPPKQHAPNNR----ELHADFFTIIGRAAGDKEAITTRVAPDSDPQTLYDNRHLVLRG 261

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +T    +  R   + + R        +E + P +  +  EG           + ++  L 
Sbjct: 262 ETASAVMKVRAATLRAFRKVFEENRMLEVTPPAMVQTQVEGGSTLFKFDYYGENAY--LT 319

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+ Q Y +  + S     F + P FR E   + R   E+  ++ E+ F+   D+L+ +E 
Sbjct: 320 QSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEYTHIEAELDFITFTDLLDHLEA 378

Query: 256 VLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRR 285
           V+  V E                 +    S  F R+ Y DAI+ 
Sbjct: 379 VICRVIELILAEPETAAFINQLNPDFKPPSRPFRRMKYSDAIQW 422



 Score = 60.9 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                   F M +   E  +  + + +      L+    EI  G +R    + ++ A+ +
Sbjct: 462 HFPAEIKAFYMKK-DPEDRRVTESVDV------LMPGVGEIVGGSMRMDDWDELMGAYKH 514

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+        +       + G  PHGG   G++R +  L     VRE SL+P     C 
Sbjct: 515 EGMDPSP----YYWYTDQRKYGTSPHGGYGLGLERFLAWLCARYTVRECSLYPRFTGRCT 570

Query: 571 L 571
            
Sbjct: 571 P 571


>gi|298706883|emb|CBJ25847.1| Asparaginyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 805

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 55/310 (17%), Positives = 99/310 (31%), Gaps = 50/310 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVR--PHGGIIFLDIRDHY--GITQVVANPDSACFEIAKSVRSE 68
           G S VG    + GW+   R    G ++FL + D    G  QVV +  +  F+ A S    
Sbjct: 323 GTSVVGQKAVVKGWLRTARAASKGALLFLVVDDGSCSGTVQVVVSKGAPGFDAAASCGGV 382

Query: 69  -WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP------LPVFGEREYP 121
              + + G V++   +          +E+ A ++E+L    E             ++ + 
Sbjct: 383 GASVSVLGTVVASKGKG-------QDVEIKADEVEVLGCVYEPDGTVGASTYPLAKKAHS 435

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                    L  R       +  R  +  +         F+   TPI+T +  EGA +  
Sbjct: 436 LEFLRSIAHLRPRTKMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQF 495

Query: 182 VPSRVNQG-----------------------------SFYALPQ---APQQYKQLLMASG 209
             S +                                 F+A         Q      A  
Sbjct: 496 AVSTLLPDAGGEEGNGHAAAAGGGPPMTPAGAVDYSKDFFARRTCLTVSGQLNVETHACS 555

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
               +   P FR E+  + R   EF+ ++ E++F +  D ++  E+ L+ +         
Sbjct: 556 LGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDMDLAEDYLKYLVAYALGHCQ 615

Query: 270 VSNNFLRICY 279
               F   C 
Sbjct: 616 GDLEFFETCP 625



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 44/132 (33%), Gaps = 24/132 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
             C + D+P        K I      F M           D  ++ A    LV    EI 
Sbjct: 691 APCIVTDYP--------KDIKA----FYMK-------LNPDGKTVAAMDI-LVPKIGEII 730

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R      + +    + +     E+         + G   H G   G +R+VM   G
Sbjct: 731 GGSQREEDLGKLTKRAKEMNLP----EDSISWYLDLRRYGTIQHAGFGLGFERLVMFATG 786

Query: 553 AKNVREVSLFPM 564
            +N+R+V  FP 
Sbjct: 787 IENIRDVIPFPR 798


>gi|108799949|ref|YP_640146.1| lysyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119869059|ref|YP_939011.1| lysyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|123178636|sp|Q1B7P4|LYSX_MYCSS RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|296439668|sp|A1UHB3|LYSX_MYCSK RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|108770368|gb|ABG09090.1| lysyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119695148|gb|ABL92221.1| lysyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 1112

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 111/256 (43%), Gaps = 10/256 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      S     + ++G V R+R +GG++F  +RD  G  Q++   D++  E   + 
Sbjct: 658 SHTAAAAVDSPDDVELDVAGRVLRIRDYGGVLFAQLRDWSGEVQLLL--DNSTLEQGSTA 715

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                + +  L+ +      + N   G   L  +   +       PLP   +    +  R
Sbjct: 716 DFTAAIDLGDLIAATGTMGYSKN---GTRSLLVRHWRLTGKCLR-PLPDKWKGLTDQEAR 771

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
            + R++DL  +T  +++++ R+ +++++R  +  + F+E  TPIL        AR FL  
Sbjct: 772 VRARYVDLAVNTEARDLIRARSGVLHAIRDTLYHKGFLEVETPILQQIHGGANARPFLTH 831

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 832 INAYDLDLY-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 889

Query: 244 VEQDDILNTMENVLRG 259
            +    ++    +++ 
Sbjct: 890 ADYHVWIDGCRELIQN 905



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 79/245 (32%), Gaps = 37/245 (15%)

Query: 332  KGGGGNRAFCDRMNEWARSQG-QPGLAYIFWRLDESGNVAGM---GP-VAKHLNIVNTEA 386
            +       + D   E  ++        ++F R  + G +  +   GP   K ++   +EA
Sbjct: 887  QAHADYHVWIDGCRELIQNAAMAANGEHVFLRPRDDGVLEPVDISGPWTVKTVHEAVSEA 946

Query: 387  IRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPF 442
            +   +D            D    P             + + L  +     +  +  DFP 
Sbjct: 947  LGEHIDAATELPTLRKLADAAGIPYLTHWDEGAVVLEMYEHL--VEDRTQKPTFYKDFP- 1003

Query: 443  YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
                        + +P T P   +            A ++DLV  G E+ +         
Sbjct: 1004 -----------TSVSPLTRPHRSIA---------GVAERWDLVAWGVELGTAYSELTDPV 1043

Query: 503  VMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
               +      +                 +A +  MPP GG+  G+DR+VML+ G  ++RE
Sbjct: 1044 EQRRRLQAQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRVVMLITGR-SIRE 1102

Query: 559  VSLFP 563
               FP
Sbjct: 1103 TLPFP 1107


>gi|312215312|emb|CBX95264.1| similar to aspartyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 1038

 Score =  158 bits (399), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 63/286 (22%), Positives = 113/286 (39%), Gaps = 32/286 (11%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH----YGITQVVANPDSACFEI 61
           H+  D    DVG  V     +H +R      +F   R       G+    A+        
Sbjct: 209 HNLQDFSAKDVGKEVIFRARIHHLRKMSSKFVFFIFRQQLVTIQGVLMEHADISKYFLYW 268

Query: 62  AKSVRSEWVLCIDGLVMSRS---AETINANIITGQIELSAQKIEI---------LSVAEE 109
           A+ + +E V+ + G++        E I A I   ++ + A  +E          ++ AE 
Sbjct: 269 AEHLDAETVVLVKGILQEPKAKQGEVIGATIHDVEVSVHAMHVEAPITDHLPFNVNEAEV 328

Query: 110 LPLPVFGEREYPES------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157
               V  +   P+              R   R +DLR          ++ I +  R ++ 
Sbjct: 329 TRADVEADLAKPDHKEGHNRVRIADRTRLNNRIIDLRSTASQSIFRIQSGICSLFRQQLD 388

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
           +E FIE  TP L   + E            +G+F A  Q+PQ  KQ+ +++ F + ++I 
Sbjct: 389 SEGFIEIHTPKLQGGATESGASVFKIDYFGRGAFLA--QSPQLAKQMAISADFGKVYEIG 446

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
             FR E+  + R   E+  LD+EM   E   ++L  ++   + +F+
Sbjct: 447 AVFRAENSNTYRHLTEYTGLDLEMQIDEHYHEVLRVLDRTFKNIFK 492



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 18/145 (12%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF            N+     +  +D+ C G EI SGG R H ++++L+    
Sbjct: 576 KFPVNARPFYAMPD------PNNPNVTNS--FDIFCRGQEILSGGQRIHDADMLLEKMRK 627

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           + I    +E       + FQ G PPHGG   G++RI+ML++   N+R  S+FP       
Sbjct: 628 LKIDPSSMEE----YIQGFQWGAPPHGGGGIGLERILMLMMSLGNIRHASMFPRDPKSL- 682

Query: 571 LLMGSPSTVSVEQLRELGLRIVENP 595
                P    V+QLR      +  P
Sbjct: 683 -----PEKPVVKQLRHPEASTMHPP 702


>gi|306836901|ref|ZP_07469855.1| lysine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567206|gb|EFM42817.1| lysine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 525

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 62/336 (18%), Positives = 132/336 (39%), Gaps = 21/336 (6%)

Query: 19  SFVR--LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           + V   ++G +  +R  G + F  ++D  G         +   +  + + +       G 
Sbjct: 75  TEVTHAIAGRLIFMRNTGKLCFATLQDGDGTQMQAMLSQAKVGK--ERLDAWKSDVDLGD 132

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-R 135
            +S S   + +    G++ + A++  + + +       F   +  E  R + R+ DL  R
Sbjct: 133 FISVSGHVVASR--RGELSIMAEEWTMAAKSLRPLPVSFA--DMAEDTRVRQRYNDLIIR 188

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYAL 194
           +   KN + R +++ ++R  + +++F+E  TP+L        AR F+  S       Y L
Sbjct: 189 EEARKNAMVRVKVMRALRNYLESQDFVEIETPMLQTLHGGAAARPFITHSNALDIDLY-L 247

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ Y +  +  G DR F+I   FR+E       P EF  L+   ++ + +D      
Sbjct: 248 RIAPELYLKRAVVGGIDRVFEINRNFRNEGVDRSHSP-EFAMLETYAAWGDYNDCARMTR 306

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN--VTEHFVHSEFR 312
             ++ V  E     TV+     +         G   P++     ++     +     E  
Sbjct: 307 ESIQSVAREVFGSTTVT-----LADGTDFDFGGEQWPEIEMYPSLNEALQRKFPGQPEVT 361

Query: 313 VFSKILSVNPGYEVWA--IPAKGGGGNRAFCDRMNE 346
           + + + ++    +V    +P   G G+    + + E
Sbjct: 362 IDTDVETLKGIAKVIGLDVPQGEGWGHGKLVEEIWE 397



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 5/93 (5%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 ++DL   GFE+A+G        V  + F +        +            A +
Sbjct: 427 EPGVTEKWDLYVRGFELATGYSELVDPVVQRERFEDQARLAAGGDEEAMVLDEDFLAAME 486

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP  G   G+DR++M L G   +RE  LFP
Sbjct: 487 QGMPPTAGTGMGMDRLLMALTGLG-IRETVLFP 518


>gi|297816700|ref|XP_002876233.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322071|gb|EFH52492.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 22/267 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIR-DHYGITQVVANPDSACF-----EIAKSV 65
           L     GS V + G VH  R    I+F+ +R     +  V    +         +  + +
Sbjct: 102 LVEEIAGSEVLIRGRVHTYRVQPSIVFVILRKSGSTVQCVAKQSEETNVSVNMIKYLEKL 161

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-------- 117
             E ++ + G+V+            T Q+E+  +K+  ++ A                  
Sbjct: 162 SCESIVDVIGVVVLPKDPVKGT---TQQVEIQVRKLYCVNKALTRLPFNVEAAARSETGR 218

Query: 118 --REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
                 +  R  +R +DLR       +  +++++N     +++++F+   TP L A S E
Sbjct: 219 RAVRVNQDTRLNHRVIDLRTPANQAIVALKSQLVNFFSENLLSKDFVNIFTPKLLAGSSE 278

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           G           QG    L Q+PQ +KQ+ +     R F+I P FR E   S R   EF 
Sbjct: 279 GGSAVFRLEY--QGQPACLAQSPQLHKQMAICGDLRRVFEIGPVFRAEKSFSHRHLCEFV 336

Query: 236 QLDMEMSFVEQD-DILNTMENVLRGVF 261
            LD+EM   +   +I++ ++ +   +F
Sbjct: 337 GLDVEMEIDKHYSEIMDLVDELFVAIF 363



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 71/206 (34%), Gaps = 23/206 (11%)

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
           S     +  + K       + +   L +   +    +  +         D      ++LG
Sbjct: 368 SKCKKELEAIGKQYPFEPLKFLEKTLRLTFEEGVQML-KEAGVEIDPLGDLNTESERKLG 426

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
            +    +      +F          +   A  PF         L         +  +D+ 
Sbjct: 427 QLVLEKYN----TEFYILH------RFPTAVRPFYTMTCVDNPL--------YSNSFDVF 468

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
             G EI SG  R H  E++ Q     GI  + +         +F+ G PPHGG  AG++R
Sbjct: 469 IRGEEIISGAQRIHTPELLEQRAREHGIDVKTIST----YIDSFRYGAPPHGGFGAGLER 524

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDL 571
           +VML  G  N+R+ SLFP        
Sbjct: 525 VVMLFCGLNNIRKTSLFPRDPQRLAP 550


>gi|145523029|ref|XP_001447353.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414864|emb|CAK79956.1| unnamed protein product [Paramecium tetraurelia]
          Length = 564

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 73/371 (19%), Positives = 135/371 (36%), Gaps = 51/371 (13%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            GD+  + V   + +   +H  R  G + FL +R++Y   QVVA      F  A+ ++  
Sbjct: 84  VGDIDQTLVNQVILVRARIHNSRVKGKLAFLVLRENYNTIQVVAEKGE--FASAQMLKYM 141

Query: 69  WVLCIDGLV-MSRSAETINANII--TGQIELSAQKIEILSVAEELPLPVFGER------- 118
             + ++ +V +    +  N  I+  T ++EL  + I++++ +  +      +        
Sbjct: 142 SGIPLESVVDIEALVKQPNKEILSCTQKVELEVRSIKVVTRSLPMLPFQIEDASRRITDF 201

Query: 119 ----------------------------------EYPESIRFKYRFLDLRRDTLHKNIVK 144
                                             +     R   R +DLR          
Sbjct: 202 EDGVQEQKQEEPQQKQEEVQQKQEKQDKTEKQQIQVMLKTRLDNRVIDLRTPAKQAIFRV 261

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           ++ I    R  ++   FIE  TP L   + EG  +       NQ +   L Q+PQ YKQ+
Sbjct: 262 QSGIGLLFREFLVENGFIEIHTPKLIGGTSEGGTNVFKLKYFNQDA--CLAQSPQLYKQM 319

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEE 263
            + + +DR F++AP FR E+  + R   EF  +D+EM   E   ++L+ M ++   +F+ 
Sbjct: 320 CLMADYDRVFEVAPVFRAENSNTHRHQCEFISMDIEMVIKEHFTELLDLMGDLCIYMFKG 379

Query: 264 FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
                        I        +   +P L+          H           + +VN  
Sbjct: 380 IEKRYQKEIEI--ISQQFPFEPFKIPEPVLKLTFEEGVKMLHEAGVNQDPHDDLDTVNEK 437

Query: 324 YEVWAIPAKGG 334
                +  K G
Sbjct: 438 TLGKLVREKYG 448



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 14/117 (11%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           +      PF TMP     +             YD    G EI SG  R H  E++++   
Sbjct: 456 RYPKKARPFYTMPCHDDPNY---------TLSYDFFMRGEEIVSGAQRVHDPELLIKQIK 506

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             GI+ E +++       +F+ G  PHGG A G++R+  L    KN+R   +FP   
Sbjct: 507 EKGIAVEPLKD----YIDSFRYGAYPHGGCAFGLERVAFLYFNLKNIRNACMFPRDP 559


>gi|67900984|ref|XP_680748.1| hypothetical protein AN7479.2 [Aspergillus nidulans FGSC A4]
 gi|40742869|gb|EAA62059.1| hypothetical protein AN7479.2 [Aspergillus nidulans FGSC A4]
 gi|259483785|tpe|CBF79459.1| TPA: cytoplasmic asparaginyl-tRNA synthetase, putative
           (AFU_orthologue; AFUA_2G05650) [Aspergillus nidulans
           FGSC A4]
          Length = 574

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 71/342 (20%), Positives = 121/342 (35%), Gaps = 28/342 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VHR+R    +IFL + D YG  Q V   D      A ++  E  + + G +
Sbjct: 149 GTRVRVLGRVHRLRSQKDMIFLTLSDGYGYLQCVLTGDLVKTYDAMTLTLETSIALHGEM 208

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRR 135
            +   +    N      EL      I+  A  ++  +      +      +  R L LR 
Sbjct: 209 RAVPPKQHAPNNR----ELHVDFYTIIGRAAGDKEAITTRVAHDSDPQTLYNNRHLVLRG 264

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +T    +  R   + + R         E + P +  +  EG           + ++  L 
Sbjct: 265 ETASSVMKVRAATLKAFRQTFDELRMTEVTPPAMVQTQVEGGSTLFKFDYYGEDAY--LT 322

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+ Q Y +  + S     F + P FR E   + R   E+  ++ E+ F+E  D+L+ +E 
Sbjct: 323 QSSQLYLETCIPS-LGDVFCVCPSFRAEKSLTRRHLSEYTHIESELDFIEFTDLLDHLEA 381

Query: 256 VLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRN--PIIM 299
           V+  V E                      S  FLR+ Y DAI      +       P   
Sbjct: 382 VICRVLEIVLADPVAKPIIAQLNPGFQMPSRPFLRMKYSDAIEWLREHEIPNEEGKPHEF 441

Query: 300 -HNVTEHFVHSEFRVFSKI--LSVNPGYEVWAIPAKGGGGNR 338
             ++ E        + ++   L+  P         K     R
Sbjct: 442 GDDIAEAAERKMTDIINRPIFLTHFPAEIKAFYMKKDPEDRR 483



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 16/135 (11%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++ P +               F M +   E  +  + + +      L+    EI  G +
Sbjct: 456 IINRPIFL-----THFPAEIKAFYMKK-DPEDRRVTESVDV------LMPGVGEIVGGSM 503

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R    + ++ A+ + G+        +       + G  PHGG   G++R +  L     V
Sbjct: 504 RMDDWDELMAAYKHEGMDPSP----YYWYTDQRKYGTSPHGGYGLGLERFLAWLCARYTV 559

Query: 557 REVSLFPMSQNFCDL 571
           R+ SL+P     C  
Sbjct: 560 RDCSLYPRFTGRCTP 574


>gi|296164539|ref|ZP_06847110.1| lysine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295900139|gb|EFG79574.1| lysine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 1087

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 10/259 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      +D    V +SG + R+R +GG++F  +RD  G  QV+        E +++ 
Sbjct: 633 SHTVAGALDADDQEAVSVSGRILRIRDYGGVLFAQLRDWSGELQVLLENSR--LEHSRTA 690

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                + +  LV        + N   G   L  +   ++      PLP   +       R
Sbjct: 691 DFTAAIDLGDLVEMTGHMGFSKN---GTRSLIVRDWRMIGKCLR-PLPNKWKGLTDPEAR 746

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
            + R++DL  +   + +V  R+ ++ S+R  + A+ FIE  TPIL        AR F+  
Sbjct: 747 VRTRYVDLAVNPESRELVTARSSVLRSVRETLFAKGFIEVETPILQQIHGGATARPFVTH 806

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   + L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 807 INTYDMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 864

Query: 244 VEQDDILNTMENVLRGVFE 262
            +    ++    +++   +
Sbjct: 865 ADYRVWIDGCRELIQNAAQ 883



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 54/162 (33%), Gaps = 28/162 (17%)

Query: 406  PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
            P +    A      + + L  +        + +DFP             + +P T P   
Sbjct: 945  PYRAQWDAGAVVLELYEHL--VEDRTERPTFYIDFP------------TSVSPLTRPHRS 990

Query: 466  MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENR 521
                         A ++DLV  G E+ +            +      +            
Sbjct: 991  ---------RRGVAERWDLVAWGVELGTAYSELTDPVEQRRRLRKQSLLAAGGDPEAMEL 1041

Query: 522  FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 +A +  MPP GG+  GIDR+VML+ G  ++RE   FP
Sbjct: 1042 DEDFLQAMEYAMPPTGGLGMGIDRLVMLITGR-SIRETLPFP 1082


>gi|71894437|ref|YP_278545.1| asparaginyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|71851225|gb|AAZ43834.1| asparaginyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 447

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 109/262 (41%), Gaps = 14/262 (5%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           S + +SGWV   R +  + F++I D   I  +        F++ ++++      I G ++
Sbjct: 16  SELTISGWVSYFRGNEKVCFVEINDGSTIKNLQVVFKGFDFKLLENLKPGSAAVIKGKIL 75

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               +       + ++E+ A ++     A+E        +E       +   L  R   L
Sbjct: 76  HTPGK-------SQEVEMQALELVDYKKADEDYPIQ--NKEIKLETLREIPHLRHRTKVL 126

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY-----A 193
              ++ R+ +   +    I +NF   ++PI+T++  EGA +           F+     A
Sbjct: 127 RAVMLIRSTLAQEIHKYFIDKNFYYMNSPIITSNDGEGAGETFEVYGSEIKHFFGKNNKA 186

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                 Q      A GF + +  AP FR E+  + +   EF+ ++ E++F    D++N  
Sbjct: 187 TLGVTGQLHGESYAVGFKKIYTFAPTFRAENSNTKKHLAEFWMVEPEVAFANLYDMINLA 246

Query: 254 ENVLRGVFEEFSNGNTVSNNFL 275
           +++L+ V E+    N     FL
Sbjct: 247 QDLLKNVLEKTLEKNKFEFEFL 268



 Score = 60.9 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 5/86 (5%)

Query: 481 QYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
            +DL+     E+  G  R    E + Q  + + IS++     F       + G     G 
Sbjct: 360 AFDLLIPQVGELIGGSQREVRYEKLKQRINELNISEKD----FKWYLDLRRFGDMGSSGF 415

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMS 565
             G +R+V+   G +N+R+   +P +
Sbjct: 416 GLGFERLVVYATGIENIRDSIPYPRT 441


>gi|126435577|ref|YP_001071268.1| lysyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|296439667|sp|A3Q0V0|LYSX_MYCSJ RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
           protein LysX; Includes: RecName: Full=Lysyl-tRNA
           synthetase; Includes: RecName: Full=Phosphatidylglycerol
           lysyltransferase; AltName:
           Full=Lysylphosphatidylglycerol synthetase; Short=LPG
           synthetase
 gi|126235377|gb|ABN98777.1| lysyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 1111

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 111/256 (43%), Gaps = 10/256 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +H+      S     + ++G V R+R +GG++F  +RD  G  Q++   D++  E   + 
Sbjct: 657 SHTAAAAVDSPDDVELDVAGRVLRIRDYGGVLFAQLRDWSGEVQLLL--DNSTLEQGSTA 714

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                + +  L+ +      + N   G   L  +   +       PLP   +    +  R
Sbjct: 715 DFTAAIDLGDLIEATGTMGYSKN---GTRSLLVRHWRLTGKCLR-PLPDKWKGLTDQEAR 770

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVP 183
            + R++DL  +T  +++++ R+ +++++R  +  + F+E  TPIL        AR FL  
Sbjct: 771 VRARYVDLAVNTEARDLIRARSGVLHAIRDTLYHKGFLEVETPILQQIHGGANARPFLTH 830

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  AP+ Y + L   G +R F++   FR+E       P EF  L+   + 
Sbjct: 831 INAYDLDLY-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAYQAH 888

Query: 244 VEQDDILNTMENVLRG 259
            +    ++    +++ 
Sbjct: 889 ADYHVWIDGCRELIQN 904



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 79/245 (32%), Gaps = 37/245 (15%)

Query: 332  KGGGGNRAFCDRMNEWARSQG-QPGLAYIFWRLDESGNVAGM---GP-VAKHLNIVNTEA 386
            +       + D   E  ++        ++F R  + G +  +   GP   K ++   +EA
Sbjct: 886  QAHADYHVWIDGCRELIQNAAMAANGEHVFLRPRDDGVLEPVDISGPWTVKTVHDAVSEA 945

Query: 387  IRVRLDMQDGDSCFFIAGD----PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPF 442
            +   +D            D    P             + + L  +     +  +  DFP 
Sbjct: 946  LGEHIDAATELPTLRKLADAAGIPYLTHWDEGAVVLEMYEHL--VEDRTEKPTFYKDFP- 1002

Query: 443  YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
                        + +P T P   +            A ++DLV  G E+ +         
Sbjct: 1003 -----------TSVSPLTRPHRSIA---------GVAERWDLVAWGVELGTAYSELTDPV 1042

Query: 503  VMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
               +      +                 +A +  MPP GG+  G+DR+VML+ G  ++RE
Sbjct: 1043 EQRRRLQAQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRVVMLITGR-SIRE 1101

Query: 559  VSLFP 563
               FP
Sbjct: 1102 TLPFP 1106


>gi|301609856|ref|XP_002934488.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic [Xenopus
           (Silurana) tropicalis]
          Length = 555

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 63/341 (18%), Positives = 121/341 (35%), Gaps = 27/341 (7%)

Query: 18  GSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V++ GWVHR+R      + F +I       QVV +    C+     + +E  + + G
Sbjct: 135 GQRVKVFGWVHRLRRQVPALLSFFEIV---RNIQVVFDGTCQCYNGL-VLSTESTVAVYG 190

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            +              G  EL+    EI+ +A           E    ++   R + +R 
Sbjct: 191 TLNLVPDG----KQAPGGHELACDYWEIVGLAPAGGADNLLNEESDVDVQLNNRHMMIRG 246

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + + K    R+ +I+  R       + E + P L  +  EG           + ++  L 
Sbjct: 247 ENMSKIFKVRSTVIHCFRNHFFDRGYYEITPPTLVQTQVEGGSTLFKLDYFGEEAY--LT 304

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+ Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  +D+LN +E+
Sbjct: 305 QSSQLYLETCIP-AMGDTFCIAQSYRAEQSRTRRHLAEYTHIEAECPFMTFEDLLNRLED 363

Query: 256 VLRGVFEEFSN-------------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           ++  V +                        F R+ Y +AI          ++    +  
Sbjct: 364 LVCDVVDRVLKSPVASLLYDLHPEFKPPKRPFRRMNYTEAITWLKEHDVK-KDDGTYYEF 422

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
            E    +  R+ +  ++       +    K     R   D+
Sbjct: 423 GEDIPEAPERLMTDSINEPILLCRFPAEIKSFYMQRCAEDK 463



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R   SE +L+ +  
Sbjct: 446 RFPAEIKSFYMQRCAEDKRLTESVDV-------LMPNVGEIVGGSMRIWDSEELLEGYKR 498

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 499 EGIDATP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRHHIRDVCLYPRFVQRCK 554

Query: 571 L 571
            
Sbjct: 555 P 555


>gi|323358770|ref|YP_004225166.1| aspartyl/asparaginyl-tRNA synthetase [Microbacterium testaceum
           StLB037]
 gi|323275141|dbj|BAJ75286.1| aspartyl/asparaginyl-tRNA synthetase [Microbacterium testaceum
           StLB037]
          Length = 446

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 27/284 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV--------LC 72
           V +SGWV  VR    + F+ +RD  G  Q+  NP +   E A    +  +        L 
Sbjct: 18  VEVSGWVETVRDQKKVQFVVLRDETGAVQL-VNPATRPSEDATDQDAAALALTETIGALA 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
               +  R     +  +  G +E+   ++ + + A           +     R  YRF+D
Sbjct: 77  TGTFLTVRGELKHDERVKLGGVEIKVGELVVAAAANPETPIAA---DSSPDKRMDYRFID 133

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR+   +     +T + ++MR   +  ++IE  +P L AS  E   +          + Y
Sbjct: 134 LRQRRNNLIFRVQTTLEHAMRTYWVERDYIEIHSPKLMASPSESNAELFEVPYFEDKTAY 193

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILN 251
            L Q+PQ +KQ+   +GF + F+IAP FR +   + R   EF  +D E+S+++  +++  
Sbjct: 194 -LAQSPQFFKQMAQVAGFGKIFEIAPAFRADPSFTSRHATEFTSIDAEISWIDSHEEVAR 252

Query: 252 TMENVLRGVFEEFSNGN-------------TVSNNFLRICYDDA 282
             E +L   F+  ++ +               +  F RI   +A
Sbjct: 253 MQEELLHTAFQAVADKHGAEIQELFGVEVQVPTLPFPRIPLAEA 296



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 25/130 (19%)

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
             +F +I D                   F   +            +     YDL+ NG E
Sbjct: 331 GHQFVFITD------------YHPEIRAFYHMRNE---------ETGLTKSYDLLFNGVE 369

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I +G  R H  EV+++     G+               F+ G PPHGG   G+ R++MLL
Sbjct: 370 ITTGAQREHRVEVLIEQAKEKGLDP----EHLDFYLDFFRFGAPPHGGFGMGLARVLMLL 425

Query: 551 LGAKNVREVS 560
           LG  ++REV+
Sbjct: 426 LGESSIREVT 435


>gi|30688944|ref|NP_849558.1| aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase,
           putative [Arabidopsis thaliana]
 gi|30688949|ref|NP_194847.3| aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase,
           putative [Arabidopsis thaliana]
 gi|7270020|emb|CAB79836.1| aspartate--tRNA ligase-like protein [Arabidopsis thaliana]
 gi|222424631|dbj|BAH20270.1| AT4G31180 [Arabidopsis thaliana]
 gi|332660472|gb|AEE85872.1| aspartyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332660473|gb|AEE85873.1| aspartyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 558

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 62/289 (21%), Positives = 106/289 (36%), Gaps = 31/289 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDS------ACFEI 61
             DL    + S V + G VH  RP    + F+ +R+     Q V +            + 
Sbjct: 98  VSDLVEEMLESEVLIRGRVHTNRPTSNKLGFVVLRESGSTVQCVVSQSEKTKVGANMVKY 157

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-------------- 107
            K +  E  + + G+V             T Q+E+  +K+  ++ +              
Sbjct: 158 LKQLSRESFVDVIGVVTLPKEPLTGT---TQQVEIQVRKVYCINKSLAKLPLSVEDAARS 214

Query: 108 ----EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
               E             +  R  YR LDLR          +  +  + R ++  +NF+ 
Sbjct: 215 EADIEASLQTPSPAARVNQDTRLNYRVLDLRTPANQAIFQLQYEVEYAFREKLRFKNFVG 274

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             TP L A S EG           +G    L Q+PQ +KQ+ +     R F++ P FR E
Sbjct: 275 IHTPKLMAGSSEGGSAVFRLEY--KGQPACLAQSPQLHKQMAICGDLRRVFEVGPVFRAE 332

Query: 224 DPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVS 271
           D  + R   EF  LD+EM       +I++ ++ +   +F   +      
Sbjct: 333 DSFTHRHLCEFVGLDVEMEIRKHYSEIMDLVDELFVFIFTSLNERCKKE 381



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 78/234 (33%), Gaps = 28/234 (11%)

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           R     + +           +IF  L+E      +  V K       + +   L +   +
Sbjct: 353 RKHYSEIMDLVDELF----VFIFTSLNERCK-KELQAVGKQYPFEPLKFLPKTLRLTFEE 407

Query: 398 SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN 457
               +    ++      D      ++LG +    +      +F          +   A  
Sbjct: 408 GVQMLKEAGVEV-DPLGDLNTESERKLGQLVLEKYN----TEFYILH------RYPKAVR 456

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           PF         L         +  +D+   G EI SG  R H+ EV+ Q     GI  + 
Sbjct: 457 PFYTMTCADNPL--------YSNSFDVFIRGEEIISGAQRVHIPEVLEQRAGECGIDVKT 508

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +         +F+ G P HGG   G++R+VML     N+R+ SLFP        
Sbjct: 509 IST----YIDSFRYGAPLHGGFGVGLERVVMLFCALNNIRKTSLFPRDPQRLSP 558


>gi|327311312|ref|YP_004338209.1| lysyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947791|gb|AEA12897.1| lysyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 481

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 71/320 (22%), Positives = 128/320 (40%), Gaps = 35/320 (10%)

Query: 2   HRYR-TH---SCGDLGVSD-----VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           H ++ TH   +  +L         VGS V  +G    +R H  ++F+D+ +     Q++ 
Sbjct: 25  HSFKITHSVKTLNELRRQALLDPWVGSTVTTAGRATDIRRHPNVVFIDLYEDGARFQIMV 84

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +P     E              G  +  S   +      G   + A+++ +L+ A +  L
Sbjct: 85  DPKEPLLEYI----------WRGDYVGASGALV--KTQRGDYAVKAERLFLLAKAVQ-SL 131

Query: 113 PVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
           P +G+ +       ++R + +  D  L   I  R R+I + R       F+E  TP+L  
Sbjct: 132 PEWGKVDRGSPFYMRHRAVSMVLDIQLRWRIYTRARLIQAFREAFWRRGFVEIPTPVLQP 191

Query: 172 S-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F          +Y L  +P+ Y +  + +GF R F+I P FR+ED  +   
Sbjct: 192 IYGGAAARPFTTHIWAIDEDWY-LRISPELYLKRYIIAGFSRVFEIGPQFRNEDIDALHN 250

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN---------GNTVSNNFLRICYDD 281
           P EF+ L+   ++ + +D++  ME       +                 S  + RI   D
Sbjct: 251 P-EFWSLEAYQAYADYNDMMRLMEETTYEALQAALGTAVVKYGESTINFSPPWRRITLYD 309

Query: 282 AIRRYGTDKPDLRNPIIMHN 301
           A+R +G   PD      + +
Sbjct: 310 ALREFGGVDPDKLTDDEIKD 329



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 2/117 (1%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ-- 506
           EKK+      +  P+      K +        +++    G E+A+     +      +  
Sbjct: 356 EKKLVQPTFVYDYPEESTPLCKPHREKPGLVERFEAFAGGHELANAYTELNDPVKQYEFF 415

Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                   K+               GMPP GGI  GIDR+ M+  GA+++++V  FP
Sbjct: 416 KREEELFPKDEAHPLDYDFVEDLSFGMPPTGGIGIGIDRLAMIATGAESIKDVIPFP 472


>gi|297570864|ref|YP_003696638.1| lysyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931211|gb|ADH92019.1| lysyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 529

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 19/265 (7%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPDSACFEIAKSVRSE 68
           G+     VG    ++G V  +RP G I F+ ++D  G   QV+ +  +   E   +++++
Sbjct: 79  GEETEDMVG----IAGRVMFMRPSGKIAFVVLQDGAGTRIQVIFSLANVGKEALDALKAD 134

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-----YPES 123
             L   G  +  +     +    G++ + A   E+ S A       F   +       E 
Sbjct: 135 VDL---GDFIFVNGHVGTSK--RGELSVFAHVWEMASKAIRPLPKTFTTADGQEMALSEE 189

Query: 124 IRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFL 181
            R + R LDL      +++++ R +++ S+R    AE FIE  TPIL        AR F 
Sbjct: 190 SRVRARHLDLITRQGARDMIRIRAKVMRSLRDTFDAERFIELETPILQVLHGGAAARPFT 249

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  A + Y +  +  G +R ++I   FR+E   S   P EF  L+   
Sbjct: 250 THINAYDQDLY-LRIATELYLKRAVVGGVERVYEIGKNFRNEGADSSHSP-EFTALEAYE 307

Query: 242 SFVEQDDILNTMENVLRGVFEEFSN 266
           ++   D +     ++++    +   
Sbjct: 308 AYGTYDSMARLTRDLVQNAARDVFG 332



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 64/203 (31%), Gaps = 28/203 (13%)

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           + G       + + L+    E + V    +         G  +K  + A      I +EL
Sbjct: 345 DLGGEWDTITLYESLSEAVGEEVTVETPREHLVKIAEKYGVKVKDYAVAGKIAEDIWEEL 404

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
             +    +   ++ DFP     E+   +   H                        ++DL
Sbjct: 405 --VGDKLWAPTFVRDFP-----EDTSPLTRNHR----------------TKPGLTEKWDL 441

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIA 540
              G E A+         +  +  +   +                  A + G PP GG+ 
Sbjct: 442 YIRGVETATAYSELADPVIQRERLTAQSLDAANGDPEAMQLDEDFIEAMEQGFPPAGGMG 501

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            GIDR++M L G   +RE   FP
Sbjct: 502 MGIDRLLMALTGLG-IRETITFP 523


>gi|66356638|ref|XP_625497.1| asparaginyl-tRNA synthetase (NOB+tRNA synthase) [Cryptosporidium
           parvum Iowa II]
 gi|46226491|gb|EAK87485.1| asparaginyl-tRNA synthetase (NOB+tRNA synthase) [Cryptosporidium
           parvum Iowa II]
 gi|323509245|dbj|BAJ77515.1| cgd8_350 [Cryptosporidium parvum]
          Length = 499

 Score =  157 bits (398), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 64/390 (16%), Positives = 119/390 (30%), Gaps = 70/390 (17%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHY--GITQVVANPDSACFEIAKSVRSE 68
           GVS +G  V + GW   VR      ++F+ + D       Q V       FE      + 
Sbjct: 30  GVSYIGKKVTVGGWARTVRKQCSDTLLFISLNDGSTSSNLQCVVEKTVKGFEEGLKATAG 89

Query: 69  WVLCIDGLVMSRSAETINANII--TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               I G ++   A+  +  ++  TG       +++I  + +    P   ++ + +    
Sbjct: 90  CSFKITGTIVKSPAQGQSVELLLNTGD-----DELKICGLCDASKYP-LAKKHHSKEFLR 143

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           +   L  R       +  R  +  ++        F+   TPI+TA+  EGA +    + V
Sbjct: 144 EVAHLRPRSQFFSSVMRIRNSLAIAIHEYFQKNGFMYIHTPIITAADCEGAGEMFQVTTV 203

Query: 187 NQ--------------------------GSFYA---LPQAPQQYKQLLMASGFDRYFQIA 217
                                         F+          Q      A      +   
Sbjct: 204 LPPESKNNISNIPASKIEGSQDMAVDYKKDFFGKASYLTVSGQLALENFACSMSDVYTFG 263

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT-------- 269
           P FR E+  + R   EF+ ++ EM+F +  D +   E +L+   E     N         
Sbjct: 264 PTFRAENSHTTRHLAEFWMIEPEMAFADLSDNMKLGEGLLKYTVEYVLINNMPDLLYLDK 323

Query: 270 -------------VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
                            F RI Y +AI        +   P+            +     +
Sbjct: 324 NIENGLVERLKVICKEEFARISYTEAIEMLKPHDKEFTVPVSW--------GMDLGSEHE 375

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
               +   +   I        ++F  ++NE
Sbjct: 376 KYITDVLEKRPCIIYNYPKDIKSFYMKLNE 405



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 4/87 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    E+  G  R    E +  A  +  +                + G  PH G   G 
Sbjct: 416 LVPKIGEVIGGSQREDDIEKLENAIKSRNMDPAPYW----WYNELRKYGSVPHSGFGLGF 471

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +R++M++ G +NVR+V  FP   N C+
Sbjct: 472 ERLIMMVTGVENVRDVIPFPRYPNHCE 498


>gi|239916712|ref|YP_002956270.1| lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
           [Micrococcus luteus NCTC 2665]
 gi|281414830|ref|ZP_06246572.1| lysyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|239837919|gb|ACS29716.1| lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
           [Micrococcus luteus NCTC 2665]
          Length = 504

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 58/293 (19%), Positives = 112/293 (38%), Gaps = 18/293 (6%)

Query: 5   RTHSCGDLGVS--------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD 55
           RTH+  ++             G  V ++G V  +R  G + F  +++     + V     
Sbjct: 41  RTHALAEVRERFDGHEPDWASGETVSVTGRVVFLRNTGKLCFATLQESGADGEAVRLQVM 100

Query: 56  SACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   + +   +EW   +D G  +S + E I +    G++ + A   E+ S A      +
Sbjct: 101 VSLAAVGEESLAEWKKVVDLGDFLSVTGEVIVSR--RGELSIMASAWEMASKALRPLPVL 158

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
               +  E  R + R+ DL  R+   + +  R ++ +++R  +    ++E  TP+L    
Sbjct: 159 --HADLNEETRVRQRYADLIVREEARRMVYTRAKVTSAVRRTLEGHGYVEVETPMLQLVH 216

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F             L  A + Y +  +  G DR F+I   FR+E   S   P 
Sbjct: 217 GGALARPFETHLNAFD-QPMTLRIATELYLKRAVVGGIDRVFEIGRVFRNEGVDSTHSP- 274

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           EF  L+   ++ +   +   M+ ++    +    G  +      I  D     
Sbjct: 275 EFTTLESYEAWADMHVMAERMQEIILNAADAVGAGRRLETAKGVIDLDGEWAW 327



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 67/205 (32%), Gaps = 29/205 (14%)

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           +D  G  A +  V   L+      I    D +   +        +     A      +  
Sbjct: 319 IDLDGEWAWV-AVYPGLSEAVGREITPDTDAETLRAIAAEHEVKVDPAWDAEKLVIELFG 377

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E  I+        ++ D+P        + +   H               +D   I+A  +
Sbjct: 378 E--IVEPTLMNPTFVYDYP-----PAAQPLARPHR--------------SDDRVIEA--W 414

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGG 538
           DL+  G E  +         +  +  +         ++          RA + G PP GG
Sbjct: 415 DLIIGGMERGTAFSELIDPVIQRERLTAQSAMAAAGDDEAMQLDEDFLRALEYGAPPMGG 474

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           I  GIDR+VML   A  +RE  LFP
Sbjct: 475 IGLGIDRLVMLFTDAG-IRETILFP 498


>gi|289617341|emb|CBI56108.1| unnamed protein product [Sordaria macrospora]
          Length = 915

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 132/361 (36%), Gaps = 28/361 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH-YGITQVVANPDSACFE----IAKSVRSE 68
            ++G  V     VH VR     + F+  RD    +  V++  D    E     A+ + +E
Sbjct: 111 QNIGKTVSFRARVHHVRAMSSKLAFIVFRDQIETVQGVLSVRDGVVSENFVRWAEHITAE 170

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL---PVFGEREYPES-- 123
             + ++G +     E     +    +E+  + + ++   +E            E      
Sbjct: 171 GFVHVEGKLQQPPEEIKGCTVHN--MEVLIESMYLVVPIDEHLPVDVHSIDHVEMDSETH 228

Query: 124 ---------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                    +R   R   LR  T          I +  R  +  + FIE  TP L  ++ 
Sbjct: 229 QLESLASTRVRVSNRIAFLRTPTAQSIFRINAGICSVFRRYLEDKGFIEIHTPKLQPAAT 288

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           E   +    +   + +F A  Q+PQ  KQ+ +++ F R F+I P FR ED  + R   E+
Sbjct: 289 ESGAEVFKVNYFGRNAFLA--QSPQLAKQMSISADFGRVFEIGPVFRAEDSNTHRHLTEY 346

Query: 235 YQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
             +D+EM+   +  + +  ++ +++ +F+            ++  +      +  + P +
Sbjct: 347 TGMDLEMAIEQDYHEAMQIIDGLMKEIFKGIYGKYRKEIEIIKTRFPHEDLVWLPETPII 406

Query: 294 RNPIIMHNVTE---HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
                +  + +      H    V ++ LS     ++  +  +    +    D+     R 
Sbjct: 407 PFKDAIKLLNDSGWTDDHGRPAVETEDLSTRAEIQLGKVIKEKYKTDYYIIDKFPASVRP 466

Query: 351 Q 351
            
Sbjct: 467 F 467



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 65/192 (33%), Gaps = 29/192 (15%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-FCSFAADARNHIAQELGIINCNCFEFCWI 437
           L        +  + + +        G P       +  A   + +   +I        +I
Sbjct: 400 LPETPIIPFKDAIKLLNDSGWTDDHGRPAVETEDLSTRAEIQLGK---VIKEKYKTDYYI 456

Query: 438 MDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           +D           K   +  PF T      +    +         +D+   G EI +GG 
Sbjct: 457 ID-----------KFPASVRPFYTHLDPEDDRFTNS---------FDIFLRGQEITTGGQ 496

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H   ++ +     GI    ++       + F  G+ PH G   G++RIV LLL   ++
Sbjct: 497 RIHRPHLLEERMKKAGIEPLGMQE----YLQGFDYGVLPHAGCGIGLERIVFLLLNLGDI 552

Query: 557 REVSLFPMSQNF 568
           R  SL+P     
Sbjct: 553 RNASLYPRDPKS 564


>gi|300707705|ref|XP_002996050.1| hypothetical protein NCER_100909 [Nosema ceranae BRL01]
 gi|263511622|sp|C4V8R9|SYKC_NOSCE RecName: Full=Probable lysyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|239605312|gb|EEQ82379.1| hypothetical protein NCER_100909 [Nosema ceranae BRL01]
          Length = 514

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 108/263 (41%), Gaps = 18/263 (6%)

Query: 11  DLGVSDVGSFVRL--SGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-SACFEIAKSVRS 67
           D    D+   V++  +G +   R H    F  +       Q+V +       +I  +++ 
Sbjct: 54  DASEEDL-KKVKVQSAGRILNFRIHARYSFFQVMSEDFTIQLVVDAQVLENKDIISNIKR 112

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             ++   G++             T +  +  +++ IL+      +P          I ++
Sbjct: 113 GDIVGFSGVL---------GRTKTKEFSVFIKELSILTPCLR-TIPTDYYGLKDPEIIYR 162

Query: 128 YRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSR 185
            R+LDL          ++RT II  +R  +  ++F+E  TP+L    +   A+ F     
Sbjct: 163 KRYLDLLINKESKNRFIQRTNIIKFIRKYLDDKDFVEVETPLLNIIPTGAAAKPFTTHHN 222

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             + + + L  AP+ Y + L+  G DR ++I   FR+E       P EF   +  M++ +
Sbjct: 223 ELKMNLF-LRIAPELYLKKLVIGGMDRVYEIGKLFRNEGIDLTHNP-EFTACEFYMAYAD 280

Query: 246 QDDILNTMENVLRGVFEEFSNGN 268
            +D++N  E +L G+ +      
Sbjct: 281 YNDMMNMAEEMLNGMCKYLHGSE 303


>gi|119595468|gb|EAW75062.1| asparaginyl-tRNA synthetase 2 (mitochondrial)(putative), isoform
           CRA_b [Homo sapiens]
          Length = 469

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 109/258 (42%), Gaps = 27/258 (10%)

Query: 12  LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           LG  +  G  +++ GW+  VR    ++FL + D   +  +    DS     ++ +     
Sbjct: 34  LGAQNASGERIKIQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGL--DSRELTFGSS 91

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++   ++  N       +EL A+KI+          P+  +  +P     +Y  
Sbjct: 92  VEVQGQLIKSPSKRQN-------VELKAEKIK--------DFPIKYKERHPLEYLRQYPH 136

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS-----R 185
              R + L   +  R+    ++        F+   TPI+T++  EGA +          +
Sbjct: 137 FRCRTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKLK 196

Query: 186 VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           V + +F+   A      Q    +M+  F + F   P FR E+ +S R   EFY ++ E+S
Sbjct: 197 VPEENFFNVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEIS 256

Query: 243 FVEQ-DDILNTMENVLRG 259
           FV+   D++  +E + + 
Sbjct: 257 FVDSLQDLMQVIEELFKA 274



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 27/157 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           AD R     E  ++        +++++P                PF M            
Sbjct: 337 ADLRTE--HEKYLVKHCGNIPVFVINYPL------------TLKPFYMRDNED------G 376

Query: 474 LLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                A   DL+  G  E+  GG+R      + +  +  G+++      +       + G
Sbjct: 377 PQHTVA-AVDLLVPGVGELFGGGLREERYHFLEERLARSGLTEV-----YQWYLDLRRFG 430

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             PHGG   G +R +  +LG  N+++V  FP   + C
Sbjct: 431 SVPHGGFGMGFERYLQCILGVDNIKDVIPFPRFPHSC 467


>gi|67611498|ref|XP_667160.1| asparaginyl-tRNA synthetase [Cryptosporidium hominis TU502]
 gi|54658269|gb|EAL36932.1| asparaginyl-tRNA synthetase [Cryptosporidium hominis]
          Length = 499

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 68/392 (17%), Positives = 123/392 (31%), Gaps = 74/392 (18%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHY--GITQVVANPDSACFEIAKSVRSE 68
           G S +G  V + GW   VR      ++F+ + D       Q V       FE      + 
Sbjct: 30  GASYIGKKVTVGGWARTVRKQCSDTLLFISLNDGSTSSNLQCVVEKTVKGFEEGLKATAG 89

Query: 69  WVLCIDGLVMSRSAETINANII--TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
               I G ++   A+  +  ++  TG       +++I  + +    P   ++ + +    
Sbjct: 90  CSFKITGTIVKSPAQGQSVELLLNTGD-----DELKICGLCDASKYP-LAKKHHSKEFLR 143

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           +   L  R       +  R  +  ++        F+   TPI+TA+  EGA +    + V
Sbjct: 144 EVGHLRPRSQFFSSVMRIRNSLAFAIHEYFQKNGFLYIHTPIITAADCEGAGEMFQVTTV 203

Query: 187 NQ--------------------------GSFYA---LPQAPQQYKQLLMASGFDRYFQIA 217
                                         F+          Q      A      +   
Sbjct: 204 LPPESRNNISNIPASKIEGSQDMAVDYKKDFFGKASYLTVSGQLALENFACSMSDVYTFG 263

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT-------- 269
           P FR E+  + R   EF+ ++ EM+F +  D +   E +L+   E     N         
Sbjct: 264 PTFRAENSHTTRHLAEFWMIEPEMAFADLSDNMKLGEGLLKYTVEYVLINNMPDLLYLDK 323

Query: 270 -------------VSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVF 314
                            F RI Y +AI        +   P+   M   +EH  +      
Sbjct: 324 NIENGLVERLKIICKEEFARISYTEAIEMLKPHDKEFTVPVSWGMDLGSEHEKY-----I 378

Query: 315 SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           + +L   P      I        ++F  ++NE
Sbjct: 379 TDVLEKKPC-----IIYNYPKDIKSFYMKLNE 405


>gi|289705689|ref|ZP_06502073.1| lysine--tRNA ligase [Micrococcus luteus SK58]
 gi|289557529|gb|EFD50836.1| lysine--tRNA ligase [Micrococcus luteus SK58]
          Length = 504

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 63/330 (19%), Positives = 120/330 (36%), Gaps = 29/330 (8%)

Query: 5   RTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD 55
           RTH+  ++     G          V ++G V  +R  G + F  +++     + V     
Sbjct: 41  RTHALAEVRERFDGHEPDWTSGETVSVTGRVVFLRNTGKLCFATLQESGADGEAVRLQVM 100

Query: 56  SACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   + +   +EW   +D G  +S + E I +    G++ + A   E+ S A      +
Sbjct: 101 VSLAAVGEESLAEWKKVVDLGDFLSVTGEVIVSR--RGELSIMASAWEMASKALRPLPVL 158

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
               +  E  R + R+ DL  R+   + +  R ++ +++R  +    ++E  TP+L    
Sbjct: 159 --HADLNEETRVRQRYADLIVREEARRMVYTRAKVTSAVRRTLEGHGYVEVETPMLQLVH 216

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F             L  A + Y +  +  G DR F+I   FR+E   S   P 
Sbjct: 217 GGALARPFETHLNAFD-QPMTLRIATELYLKRAVVGGIDRVFEIGRVFRNEGVDSTHSP- 274

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-- 290
           EF  L+   ++ +   +   M+ ++    +    G  +      I  D            
Sbjct: 275 EFTTLESYEAWADMHVMAERMQEIILNAADAVGAGRRLETAKGVIDLDGEWAWVAVYPGL 334

Query: 291 ---------PDLRNPIIMHNVTEHFVHSEF 311
                    PD    ++     EH V  + 
Sbjct: 335 SEAVGREITPDTDAEMLRAIAAEHEVKVDP 364



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 67/205 (32%), Gaps = 29/205 (14%)

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           +D  G  A +  V   L+      I    D +   +        +     A      +  
Sbjct: 319 IDLDGEWAWV-AVYPGLSEAVGREITPDTDAEMLRAIAAEHEVKVDPAWDAEKLVIELFG 377

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           E  I+        ++ D+P        + +   H               +D   I+A  +
Sbjct: 378 E--IVEPTLMNPTFVYDYP-----PAAQPLARPHR--------------SDDRVIEA--W 414

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGG 538
           DL+  G E  +         +  +  +         ++          RA + G PP GG
Sbjct: 415 DLIIGGMERGTAFSELIDPVIQRERLTAQSAMAAAGDDEAMQLDEDFLRALEYGAPPMGG 474

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           I  GIDR+VML   A  +RE  LFP
Sbjct: 475 IGLGIDRLVMLFTDAG-IRETILFP 498


>gi|6166300|gb|AAF04770.1|AF104224_4 aspartyl-tRNA synthetase [Listeria monocytogenes]
          Length = 117

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 49/115 (42%), Positives = 66/115 (57%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+V NG+EI  G +R +  EV    F  +G + E  + +FG L  A + G PPHGGIA
Sbjct: 1   AYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFTDESAKEQFGFLMDALEYGTPPHGGIA 60

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
            G+DRIVM+L G  N+R+   FP + +  D L  +P  VS  QL EL L  V+  
Sbjct: 61  LGLDRIVMILAGRNNLRDTIAFPKTGSAVDPLTNAPGEVSEAQLAELKLETVKKE 115


>gi|255086573|ref|XP_002509253.1| predicted protein [Micromonas sp. RCC299]
 gi|226524531|gb|ACO70511.1| predicted protein [Micromonas sp. RCC299]
          Length = 624

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 98/581 (16%), Positives = 183/581 (31%), Gaps = 71/581 (12%)

Query: 7   HSC-GDLGVSDVGSFVRLSGWVHRVR--PHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           H+C GD G S +GS V + GWV   R    G ++FL++ D  G   +     +    I +
Sbjct: 96  HACPGD-GASLIGSTVVVGGWVKTGRVADKGALVFLEVNDGTGPKNLQVVVKAEVHAIDE 154

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
              +   + ++G + +           T  +E+ A KI  +   +    P+  ++   E 
Sbjct: 155 LKSTGTCVVVEGELKAPPEG------ATQVVEMHATKILHVGPCDAAKYPIAKKKISLEF 208

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
           +R K   L  R +T+      R+ +  +         F+   TP++T S  EGA +    
Sbjct: 209 LREKI-HLRTRTNTIAAIARIRSALSYATHSFFNKNGFLYVHTPLITQSDCEGAGEMFQV 267

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           + +   +  A     +      + +   +  +     +      D+   +     M    
Sbjct: 268 TTLLGAADAAADAGEKPPSAEDVEAMRAKVTEAGDVVKQLKEAGDKAAVKPAVDAMLKLK 327

Query: 244 VEQDDILNTMENVLRGVFE------EFSNGNTVSNNFLRICYDDAIRRYGTDK------- 290
            E  + + T    + G+F       ++S+       FL +     +  Y           
Sbjct: 328 GELAE-METASRKVGGLFRDEKGKIDYSHDFFSEPTFLTVSGQLNVETYACAMTSVYTFG 386

Query: 291 PDLR--NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           P  R  N     ++ E ++      F+ +       E +                   + 
Sbjct: 387 PTFRAENSNTTRHLAEFWMIEPEIAFADLQDDMQCAEDYVKYCLN-------------YV 433

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK 408
                  LA+I    D+          A     V+       L     D   F+      
Sbjct: 434 LEHCPEDLAFISKMYDKEALDRVKHVAASPFGRVSYTEAIELLKKAVADGKEFVYPVEWG 493

Query: 409 FCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
               A +   ++A+E+        +   + ++P        K I      F M       
Sbjct: 494 I-DLATEHERYLAEEIFK------KPVIVYNYP--------KDIKA----FYMRLNED-- 532

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
                     A    LV    E+  G  R    EVM      +G+  E  E         
Sbjct: 533 ------GKTVAAMDVLVPKVGELIGGSQREERLEVMEGRMHEMGLEPEEYE----WYMDL 582

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            + G   H G   G +R+++   G  N+R+V  +P     C
Sbjct: 583 RRYGSVVHSGFGLGFERLILFCTGMDNIRDVIPYPRWPGNC 623


>gi|19074329|ref|NP_585835.1| ASPARTYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74697556|sp|Q8SRQ8|SYDC_ENCCU RecName: Full=Probable aspartyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Aspartate--tRNA ligase; Short=AspRS
 gi|19068971|emb|CAD25439.1| ASPARTYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 473

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 68/303 (22%), Positives = 114/303 (37%), Gaps = 27/303 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--------FEIA 62
           DL  S  G  V + G+V +    G  IF+ +RD     Q +    +          F   
Sbjct: 18  DLDGSLDGRCVSVRGFVFKSSCTGKYIFIVLRDGGCTVQCMCEKPTDGSGGLTMPEFSSL 77

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           + V  E  + I G V+ +  E    +     IE+      +LS+A++       +     
Sbjct: 78  RKVTHESYIEIRGRVVKQGMEISGCSKK--DIEVRILGFRVLSIADKSLPFAMKDVSATA 135

Query: 123 S--------------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                          IR   R +DLR             ++   R  +    F+E  T  
Sbjct: 136 EEREKNPTLQNVAYHIRLDNRAMDLRAPQTRATFRVVDGVMFFFRTYLRQNGFMEIKTSK 195

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L  SS EG  +        + +F A  Q+PQ YKQ+ +  GF R ++I   +R E+   +
Sbjct: 196 LIGSSSEGGANLFSVDYFKRKAFMA--QSPQLYKQMAIVGGFKRVYEIGHVYRAEESNIN 253

Query: 229 RLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
           R   EF  LDMEM    + +D++  + ++L  +F+            +R  +     +Y 
Sbjct: 254 RYLSEFVGLDMEMEICTDYNDVIRFIHSMLVSIFDNLKKEYGEELETIRAFHAFEDLKYR 313

Query: 288 TDK 290
            D 
Sbjct: 314 RDP 316



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 13/119 (10%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K    +  PF   +                  YD +  G EI SG  R  + + +++   
Sbjct: 365 KDYPISTRPFYTYRDE---------EKGITRSYDFILRGQEILSGAQRVSIYKDLVKYVE 415

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             GIS     +  GG   +F+ G PPHGG   G++R++    G  ++R  SLFP   N 
Sbjct: 416 EHGISP----SSLGGYLESFKYGAPPHGGCGIGLERLMKAYFGMGDIRCFSLFPRDPNR 470


>gi|170587862|ref|XP_001898693.1| Asparaginyl-tRNA synthetase, cytoplasmic [Brugia malayi]
 gi|158593963|gb|EDP32557.1| Asparaginyl-tRNA synthetase, cytoplasmic, putative [Brugia malayi]
          Length = 548

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 71/389 (18%), Positives = 123/389 (31%), Gaps = 23/389 (5%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
                 V + GW+HR+R  G  ++F  +RD  G  QV+          A +V +E  + I
Sbjct: 121 KHRNERVCIKGWIHRMRRQGKSLMFFILRDGTGFLQVLLMDKLCQTYDALTVNTECTVEI 180

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +                 EL A   +I+  A    +      E         R L +
Sbjct: 181 YGAIKEVPEG----KEAPNGHELIADFWKIIGNAPPGGIDNVLNEEASVDKMLDNRHLVI 236

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +     +  R     +MR       ++E + P L  +  EG           + SF  
Sbjct: 237 RGENAAALLRLRAAATRAMREHFYNAGYLEVAPPTLVQTQVEGGSTLFNLDYFGEQSF-- 294

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  + +     F IA  +R E  R+ R   E+  ++ E  F+  DD++  +
Sbjct: 295 LTQSSQLYLETCIPT-LGDVFCIAQSYRAEKSRTRRHLAEYAHVEAECPFITLDDLMEKI 353

Query: 254 ENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E ++    +                         FLR+ Y DAI+       +       
Sbjct: 354 EELVCDTVDRLLADEEAKKLLEHINPKFQPPERPFLRMEYKDAIKWLQEHNVENEFGNTF 413

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
               E    +  R  +  ++       +    K     R   D     +     PG+  I
Sbjct: 414 T-YGEDIAEAAERFMTDTINKPILLNRFPSEIKAFYMQRDAKDNTLTESVDLLMPGVGEI 472

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIR 388
                       +    K++ I       
Sbjct: 473 VGGSMRIWKFDELSKAFKNVEIDPKPYYW 501



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAF 508
            +       F M +   ++     +        DL+  G  EI  G +R    + + +AF
Sbjct: 438 NRFPSEIKAFYMQRDAKDNTLTESV--------DLLMPGVGEIVGGSMRIWKFDELSKAF 489

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            NV I  +     +         G  PHGG   G++R +  L    ++R+V L+P 
Sbjct: 490 KNVEIDPKP----YYWYLDQRLYGTCPHGGYGLGLERFICWLTNTNHIRDVCLYPR 541


>gi|145229355|ref|XP_001388986.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS
           513.88]
 gi|134055090|emb|CAK43730.1| unnamed protein product [Aspergillus niger]
          Length = 952

 Score =  157 bits (397), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 71/372 (19%), Positives = 135/372 (36%), Gaps = 30/372 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH----YGITQVVANPDSACF 59
           RT +   +  S VG  +  +  +H +R     ++FL  R       G+    A   S   
Sbjct: 132 RT-NLDAISESLVGQQICFTARLHIIRRMSAKLVFLVFRQQLLTFQGVLHEEAGVKSIAM 190

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE- 117
              A+ +R   ++ + G +       +   I    +E+S  ++  +   EE       E 
Sbjct: 191 IHWAEHLRLGSIVRVRGTIQKPQVPILGCTIH--DVEISIDELHQVVRREEPVPFSIYEA 248

Query: 118 --------------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
                            P+ +R   R LDLR  T       ++ I N  R  +  + F+E
Sbjct: 249 EIQTAEEERIEGRRSHIPDRVRLTNRLLDLRTPTSQSIFRIQSAICNLFRFALDEQGFME 308

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             TP L  S+ E            + +F A  Q+PQ  KQ+ +A+ F R ++I   FR E
Sbjct: 309 IHTPKLQGSATESGASVFHVQYFGRDAFLA--QSPQLAKQMAIAADFGRVYEIGAVFRAE 366

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           +  + R   E+  LD+EM+  E   ++L+ ++ V++ + +            ++  +   
Sbjct: 367 NSNTHRHLTEYTGLDIEMAIEEHYHEMLDVLDAVIKSILQGVYGRYRREVETVKHQFPSE 426

Query: 283 IRRYGTDKPDLRNPIIMHNVTE---HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
              +    P LR    +  + +              + L       +  +  +  G +  
Sbjct: 427 DVVWLEKTPILRFADGIKMLNDSGWRDEDGNPLPEDEDLHTRDEIRLGELVKEKYGTDYY 486

Query: 340 FCDRMNEWARSQ 351
             D+    AR  
Sbjct: 487 ILDKFPASARPF 498



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 21/166 (12%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   +  PF TMP    +    +         +D+   G EI SGG R H   ++ +   
Sbjct: 490 KFPASARPFYTMPDPDDDRYTNS---------FDIFVRGQEIVSGGQRIHDPHMLEENMR 540

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             GI  + +E+        F+ G PPH G   G++R++MLLL   N+R  SLFP      
Sbjct: 541 RSGIDPDTMED----YMEGFRWGAPPHAGAGVGLERLLMLLLKLGNIRLASLFPRDPRSF 596

Query: 570 DLLMGSPSTVSVEQLRELGLRIVENP-KKILKISVTTILRNVYGLK 614
                 P+     QLR      ++ P  +  + ++      +  L+
Sbjct: 597 ------PAKPVTAQLRHPESSTIDPPWARDRRGAIAQDTSQLQPLE 636


>gi|320334441|ref|YP_004171152.1| Asparaginyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755730|gb|ADV67487.1| Asparaginyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 444

 Score =  157 bits (396), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 56/299 (18%), Positives = 101/299 (33%), Gaps = 14/299 (4%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVL 71
           + +G  V L  W+      G I FL +RD  G  Q      +     FE AK +  E  +
Sbjct: 9   AHIGQTVTLDAWLTDKSGKGKIQFLKLRDGSGFVQATVFKNDVTEDVFESAKRLTQESSV 68

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G V +            G +EL+ + +  + V+          +E+       +R L
Sbjct: 69  RFTGEVRADER-------APGGVELAVRDLSPVQVSL--GEYPITPKEHGIEFLMDHRHL 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
             R       +  R  +  ++      E FI    P  T ++ EG  +        +   
Sbjct: 120 WARHRRPWAILRVRDCVQRAVVDFFHGEGFIRFDAPFFTPNAAEGTTELFEIDLFGEDKA 179

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L Q  Q +     A  F + +   P FR E  ++ R   EF+ ++ E++     + +N
Sbjct: 180 Y-LSQTGQLH-AEAGALAFGKVYTFGPTFRAEKSKTRRHLLEFWMIEPEVAPSNHTENMN 237

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
             E  +  +        T     L    D        + P +     +  + +H    +
Sbjct: 238 LQERFVSFLVRRALEECTEELQLLGRDLDKLRPAAEGNYPRVTYTQALDIIRQHIEDRD 296



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 39/117 (33%), Gaps = 14/117 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAF 508
           K   A   F M           D         D++      EI  G  R H  E++    
Sbjct: 334 KYPAAIKAFYMQPD------PQDPTVALCD--DMIAPEGYGEIIGGSERIHDYELLKGRI 385

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            + G+        F       + G  PH G   G++R++  + G  ++RE   FP  
Sbjct: 386 EHEGLPL----EAFDWYLDLRRYGSVPHAGFGMGLERVIAWITGIDHIREAIPFPRM 438


>gi|198428712|ref|XP_002119984.1| PREDICTED: similar to asparaginyl-tRNA synthetase 2
           (mitochondrial)(putative) [Ciona intestinalis]
          Length = 471

 Score =  157 bits (396), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 98/266 (36%), Gaps = 22/266 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           +    V     + GWV  +R H   +F+DI D   +  +     S  F            
Sbjct: 25  VNGEAVSQNGWIQGWVQSIRKHKNFMFVDIVDGTSLNPLQVVLPSHMFN---------SQ 75

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
             +G  +S +   +  ++   +IE+  ++I+++   +    P      +       Y  L
Sbjct: 76  LQNGAAVSANGTFVETDLNVNKIEMVCEEIQVVGPCDPETYPFLKHTPHDMQHLRSYPHL 135

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---------V 182
            +RR ++      R ++          E F    TPI+T S  EGA +            
Sbjct: 136 RMRRTSMINAFKLRNQLEMLFHEFFQNEGFTHVHTPIITLSDCEGAGELFSIKSDTSTNT 195

Query: 183 PSRVNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               ++  F+   A      Q      A      + ++P FR E   S +   EF  L++
Sbjct: 196 DMENSENHFFNKPAYLTVSGQMHLEACAMSLGSVYTLSPVFRAEHGISRKHLSEFRMLEV 255

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEF 264
           E++F  +  +IL+ +E+ ++   E  
Sbjct: 256 EVAFTQDLHEILDLIEDSIKFCIERV 281



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 26/151 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           QE  ++        +I++FP                PF M          ND  ++ A  
Sbjct: 346 QESFLVKHFGLTPVFIINFP------------KVAKPFYMYA-------NNDNNTVAAV- 385

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+     EI  G +R H  E++  +    G++++  E          + G  PHGG  
Sbjct: 386 -DLIFPFCGEICGGSLREHRLELLQDSLRTSGLNEKDYE----WYLDLRRFGSAPHGGYG 440

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G DR+V  LLG +N+++   FP + + C L
Sbjct: 441 LGFDRLVHFLLGTRNIKDAVPFPRTPHSCPL 471


>gi|73956994|ref|XP_861471.1| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 6 [Canis familiaris]
 gi|73956996|ref|XP_861505.1| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 7 [Canis familiaris]
          Length = 441

 Score =  157 bits (396), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 92/221 (41%), Gaps = 7/221 (3%)

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           +S  ++  +           G ++             G++ +   +I +LS      LP 
Sbjct: 3   NSRNYKSEEEFIHINNKLRRGDIIGVKGNP--GKTKKGELSIIPYEITLLSPCL-HMLPH 59

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                  +  R++ R+LDL  +   +   + R++II  +R  +    F+E  TP++    
Sbjct: 60  LHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIP 119

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P 
Sbjct: 120 GGAVAKPFITYHNELDMNLY-MRIAPELYHKILVVGGIDRVYEIGRQFRNEGIDLTHNP- 177

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           EF   +  M++ +  D++   E ++ G+ +  +    V+ +
Sbjct: 178 EFTTCEFYMAYADYHDLMEITEKMISGMVKHITGSYKVTYH 218



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 323 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 382

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 383 YGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFPAMK 418


>gi|15806075|ref|NP_294779.1| aspartyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|6458780|gb|AAF10623.1|AE001956_4 aspartyl-tRNA synthetase, non-discriminating [Deinococcus
           radiodurans R1]
          Length = 435

 Score =  157 bits (396), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 65/283 (22%), Positives = 114/283 (40%), Gaps = 31/283 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
               G  V+L G+VH  R  GG+ FL +RD  G+TQ V +  +              + +
Sbjct: 14  PQHEGQTVKLQGFVHARRDLGGVQFLVLRDVTGVTQCVGSGLTLPLAE-------SSVEV 66

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE--YPESIRFKYRFL 131
            G V +            G  E+  +   ++S A E       + E          YR +
Sbjct: 67  VGKVKAHPK-------APGGFEVQVEDFRVISAATEATPVEIPKMEWNVNPETMLDYRVV 119

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R       +  +  ++++ R  +  E F E STP + ++  EG  +          ++
Sbjct: 120 TVRGLKERAALKVQAELVDAFRAHLRGEGFTEISTPKIVSAGAEGGANLFPIDYFGHPAY 179

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDIL 250
            A  Q+PQ YKQ +M   F+R F++A  +R E+  + R   E+  LD+EM F+ +++D++
Sbjct: 180 LA--QSPQLYKQ-IMVGVFERVFEVAAVYRAEEHATSRHLNEYLSLDVEMGFIEDEEDVM 236

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
                +L  + E             R          G   PD+
Sbjct: 237 GLENRLLASIMERL-----------RATSQAEFELLGATIPDV 268



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 19/139 (13%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P             A  PF       E    N         +DL+  G EI 
Sbjct: 316 DFVFVTKYP------------RAARPFYAHPELNEDGSVN---GEVTRGFDLLFRGIEIT 360

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SGG R H   +++ + +   +  E +E    G    F+ GMPPHGG A G +R+   LLG
Sbjct: 361 SGGQRIHDYGMLMDSIAAYKLKPESLE----GYTEVFKYGMPPHGGFAIGAERLTAKLLG 416

Query: 553 AKNVREVSLFPMSQNFCDL 571
             NVR    FP  ++    
Sbjct: 417 IANVRYARAFPRDRHRLTP 435


>gi|302528981|ref|ZP_07281323.1| aspartyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302437876|gb|EFL09692.1| aspartyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 420

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 59/249 (23%), Positives = 101/249 (40%), Gaps = 22/249 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           VGS V ++GWVHR R    + FL +RD  G    V A P     E         V+ + G
Sbjct: 20  VGSTVTIAGWVHRRRVLKSVAFLVVRDRTGTAQAVFAEPPEVAEET--------VVRLTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFLDL 133
            V++              +EL    +E+LS  E          E      +      + L
Sbjct: 72  QVVANPQ-------APQGVELREPVLEVLSAPEKQPPFPLYRPEVAAGLPVVLDNAAVAL 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R   L +        + + R  +  + F E  TP + A++ E   +        + ++ A
Sbjct: 125 RHPVLRRRFEVAAASVAAFRRALDGQGFTEIHTPKIVATATESGANVFQLDYFGRPAYLA 184

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNT 252
             Q+PQ +KQ  M   F+R +++ P FR E   + R   ++  LD E+ F  +  D++  
Sbjct: 185 --QSPQFFKQ-AMVGVFERVYEVGPVFRAEPHDTARHLAQYTSLDAELGFIADHRDVMTV 241

Query: 253 MENVLRGVF 261
           + +V+  + 
Sbjct: 242 LRDVVAEMA 250



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 27/138 (19%)

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
             +  EF ++  +P             A  PF                  ++  +DL+  
Sbjct: 304 REHGSEFLFVTGYPM------------AKRPFYTHPD--------PADPARSHSFDLLFR 343

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
           G E+ +GG R H         ++          ++     AF  GMPPHGG A G++R V
Sbjct: 344 GLELVTGGQRLHR-------HADYLAVLGEAAAQYSDYLDAFAYGMPPHGGFAIGLERWV 396

Query: 548 MLLLGAKNVREVSLFPMS 565
             +LG  NVR  +LFP  
Sbjct: 397 ARVLGVANVRGATLFPRD 414


>gi|297820926|ref|XP_002878346.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297324184|gb|EFH54605.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 540

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 132/362 (36%), Gaps = 25/362 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           + +Y T S GD    D    V L+G +   R     + F D+ +     QV  +   +  
Sbjct: 39  IEKYTTLSNGDHVEDD---QVSLAGRIMSRRSSSSKLFFYDLHNCSSRVQVTVDASKSEL 95

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-----------E 108
           + A+  R    +    +V              G++ +  +   +LS             E
Sbjct: 96  DEAEFTRVHANVKHGDIVGFTG---FPGKTKRGELSIFPRSFTVLSHCLHMLQKPSPGLE 152

Query: 109 ELPLPVFGER-----EYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFI 162
              +P             + IR++ R+LDL   D + +  + +T+II  +R  +   +F+
Sbjct: 153 PNWVPGKPRTPETYILKDQEIRYRQRYLDLMLNDEVCQIFMTKTKIIKYIRRYLDDLDFL 212

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
           E  TP+++  +   A         +      +   P+ Y + L+  GF+R ++I   FR+
Sbjct: 213 EVETPMMSMIAGGAAARRFATHHNDMNMKMFMRITPELYLKQLVVGGFERVYEIGKQFRN 272

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           E       P EF   +  M+F + +D++   E +L G+ +E + G  +  +      +  
Sbjct: 273 EGIDLTHNP-EFTTCEFYMAFADYNDLMEMSEKLLSGMVKELTGGYKIKYHANGYDKEPI 331

Query: 283 IRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
              +      +   + +  V    +  +   +     +    E + +            +
Sbjct: 332 EIDFTPPFRRIEMMVELDKVANLNIPKDLASWEANKYLIDACERFDVTCPPPKTTARLLE 391

Query: 343 RM 344
           ++
Sbjct: 392 KL 393



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 15/143 (10%)

Query: 459 FTMPQGGMESLKGNDLLS--IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F M Q  + S       S      +++L  N  E+ +     +      Q F++    + 
Sbjct: 407 FIMNQPKIMSPLAKCHRSNEFLTERFELFVNQHELCNAYTELNDPVEQRQRFADQLKDRR 466

Query: 517 VVENRF--GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
             ++         A + G+PP GG   GIDR+VMLL  ++N++EV LFP  +   D    
Sbjct: 467 YGDDEAMDETFCTALEYGLPPTGGWGMGIDRLVMLLTDSQNIKEVLLFPTMKPGLD---- 522

Query: 575 SPSTVSVEQLR--ELGLRIVENP 595
                    LR  E  + I+  P
Sbjct: 523 -----EPAALRQVEPNISIIHTP 540


>gi|297625418|ref|YP_003687181.1| Lysyl-tRNA synthetase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296921183|emb|CBL55732.1| Lysyl-tRNA synthetase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 535

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 56/273 (20%), Positives = 108/273 (39%), Gaps = 19/273 (6%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQ--VVANP 54
           R H+  ++           +    V + G V  +R  G + F  ++D +   Q       
Sbjct: 72  RDHTLAEVRATWGHLAAGEETQDEVTIGGRVIFIRNSGKLCFATLQDGFTPDQDAERLQI 131

Query: 55  DSACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
             +  E+     + W   +D G  +      I +    G++ + A + ++ S A      
Sbjct: 132 MLSKAEVGDESLAAWKADVDLGDFVWVRGRVIASK--RGELSVMASEWKLASKALRPLPT 189

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA- 171
           +    +  E  R + R+ DL      + +V+ R  I   +R  +  + ++E  TP+L + 
Sbjct: 190 L--HNDLSEEARVRQRYNDLIVRPAARTMVRQRALITRKIRETLEEQGYLEVETPVLQSV 247

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                AR F           Y L  A + + + +M  G DR +++   FR+E   S   P
Sbjct: 248 HGGAAARPFTTHLNAFDIDMY-LRIALELHLKRVMVGGADRVYEMGRVFRNEGVDSSHSP 306

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
            EF  L+   S+ +Q  I  T+++++  V E  
Sbjct: 307 -EFTMLEAYQSWGDQFTIAETLKSIIMKVAEAL 338



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 66/205 (32%), Gaps = 29/205 (14%)

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           +D  G    + PV + L+    E I  +  ++                        H+ +
Sbjct: 350 IDLKGEWIWL-PVYEGLSGEVGEEITTKTPVEHLRHIADAHKVDYDASWIDQKMVLHLFE 408

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
           EL  +     +  ++ DFP     E  + +   H                         +
Sbjct: 409 EL--VEKGLTQPTFVCDFP-----EIAQPLARRHR----------------SKPGCIEAW 445

Query: 483 DLVCNGFEIASGGIRNHMS----EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           DL+  G E  +G           E++ Q                     A + G PP GG
Sbjct: 446 DLIIGGMERGTGFSELIDPVIQREILTQQSLAAAAGDPEAMQLDEDFLNALEQGCPPMGG 505

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G+DR+VML  GA  +RE  LFP
Sbjct: 506 LGLGVDRLVMLFTGAG-IRETILFP 529


>gi|296414834|ref|XP_002837102.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295632952|emb|CAZ81293.1| unnamed protein product [Tuber melanosporum]
          Length = 500

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 13/254 (5%)

Query: 17  VGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           +   V + G +   R     +IF D+       QVV N      E  +  R   +L   G
Sbjct: 29  IDKLVTIRGRIKNYREVSSKLIFYDLVQDGEKIQVVVNCARVGGEKGE-FRRISMLTRIG 87

Query: 76  LVMSRSAETINANIITGQIELSAQ-KIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            V+S +          G++ + A   ++IL+ +  +P             R + R +DL 
Sbjct: 88  DVVSVTG--YPGRTKAGELTIFATAHLQILAPSLHVPPQTI----LDLETRLRNRHVDLM 141

Query: 135 RDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSR-VNQGSF 191
              +  + +  R+ II  +R   I+ +F+E  TPIL+ +     A+ FL  +  V +G  
Sbjct: 142 VRPVAGQILRLRSHIIQHIRDFFISRDFVEVQTPILSDTFGGAVAKPFLTEATSVCRGKQ 201

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
            AL  AP+ + + L+  G DR F+I   FR+E   +   P EF   +   ++   +DI+N
Sbjct: 202 LALRIAPELWLKRLVIGGLDRVFEIGTQFRNEGVDNTHNP-EFTTCEFYQAYAGLEDIIN 260

Query: 252 TMENVLRGVFEEFS 265
           T E +L G+  + S
Sbjct: 261 TTEELLSGMARKVS 274



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 12/115 (10%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ--AFSNVGIS 514
           +P T+      SL         + + +L  +G E+ +     +      +          
Sbjct: 368 HPETLSPLSKTSLL---HGQRVSSRVELFVDGKELVNAYEEENSPTEQRRKFVMQAGWKD 424

Query: 515 KEVVENRFGG-------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           ++V+E    G         +A + G+PP GG   GIDR+VM+  GA+ + +V  F
Sbjct: 425 EDVIERGEDGEGVVDEAYCQALEWGLPPTGGWGIGIDRLVMVFAGAERIADVLAF 479


>gi|297702663|ref|XP_002828292.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like, partial
           [Pongo abelii]
          Length = 407

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 61/327 (18%), Positives = 114/327 (34%), Gaps = 22/327 (6%)

Query: 34  GGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQ 93
             ++FL +RD  G  Q V   +         + +E  + + G++              G 
Sbjct: 1   KNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGMLNLTPKG----KQAPGG 56

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
            ELS    E++ +A           E    ++   R + +R + + K +  R+ +    R
Sbjct: 57  HELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGENMSKILKARSMVTRCFR 116

Query: 154 CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
                  + E + P L  +  EG           + +F  L Q+ Q Y +  +       
Sbjct: 117 DHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFGEEAF--LTQSSQLYLETCLP-ALGDV 173

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS-------- 265
           F IA  +R E  R+ R   E+  ++ E  F+  DD+LN +E+++  V +           
Sbjct: 174 FCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLEDLVCDVVDRVLKSPAGSVV 233

Query: 266 -----NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
                N       F R+ Y DAI           +    +   E    +  R+ +  ++ 
Sbjct: 234 HELNPNFQPPKRPFKRMNYSDAIVWLKEHDVKKEDG-TFYEFGEDIPEAPERLMTDTINE 292

Query: 321 NPGYEVWAIPAKGGGGNRAFCD-RMNE 346
                 + +  K     R   D R+ E
Sbjct: 293 PILLCRFPVEIKSFYMQRCPEDSRLTE 319



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +S     +         L+ N  EI  G +R   SE +L  +  
Sbjct: 298 RFPVEIKSFYMQRCPEDSRLTESVDV-------LMPNVGEIVGGSMRICDSEEILAGYKR 350

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +L   ++R+V L+P     C 
Sbjct: 351 EGIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCT 406

Query: 571 L 571
            
Sbjct: 407 P 407


>gi|115400689|ref|XP_001215933.1| asparaginyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114191599|gb|EAU33299.1| asparaginyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 574

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 60/302 (19%), Positives = 113/302 (37%), Gaps = 25/302 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G +HR+R    +IF+ + D YG  Q +   +      A ++     + I G +
Sbjct: 149 GTRVRVLGRIHRLRAQKDVIFITLADGYGYMQCILTGNLTKTYDAMTLTIATSMAIHGEM 208

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRR 135
            +        N      EL A    ++  A  ++  +      +      +  R L LR 
Sbjct: 209 RAVPPGQHAPNNR----ELHADFFTVIGRAAGDKEAITNRVAHDADPQTLYDNRHLVLRG 264

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +T    +  R   + + R        +E + P +  +  EG           + ++  L 
Sbjct: 265 ETASAVMKVRAATLRAFRQTFEEHRMLEVTPPAMVQTQVEGGSTLFKFDYYGENAY--LT 322

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+ Q Y +  + S     F + P FR E   + R   E+  ++ E+ F+  +D+L+ +E+
Sbjct: 323 QSSQLYLETCLPS-MGDVFCVCPSFRAEKSLTRRHLSEYTHIEAELDFITFNDLLDHLES 381

Query: 256 VLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRN--PIIM 299
           V+  V +                 +  T S  F R+ Y DAI+             P   
Sbjct: 382 VICRVIDLTLADPATAALLKQLNPDFKTPSRPFRRMKYSDAIQWLREHDIPNEEGKPHEF 441

Query: 300 HN 301
            +
Sbjct: 442 GD 443



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                   F M +  +E  +  + + +      L+    EI  G +R    + ++ A+ +
Sbjct: 465 HFPAEIKAFYMKK-DVEDRRVTESVDV------LMPGVGEIVGGSMRMDDWDELMAAYKH 517

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+        +       + G  PHGG   G++R +  L     VRE SL+P     C 
Sbjct: 518 EGMDPSP----YYWYTDQRKYGTSPHGGYGLGLERFLAWLCARYTVRECSLYPRFTGRCT 573

Query: 571 L 571
            
Sbjct: 574 P 574


>gi|290984147|ref|XP_002674789.1| aspartyl-tRNA synthetase [Naegleria gruberi]
 gi|284088381|gb|EFC42045.1| aspartyl-tRNA synthetase [Naegleria gruberi]
          Length = 562

 Score =  157 bits (396), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 68/319 (21%), Positives = 115/319 (36%), Gaps = 38/319 (11%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH----YGITQVVANPDSACFEIAKSVR 66
           DL  S  GS V +   +H V   G   F+ +R+               ++A  + A+ + 
Sbjct: 94  DLDASKEGSVVTVRSRIHNVTGKGKACFITLREGCFSVQATLFAENEEEAAMAKYAQKLS 153

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-------------EELPLP 113
            E V+ + G ++    E          +E+  +KI  +S A             E     
Sbjct: 154 KESVIQLVGTIVKV--EQKVEKATQQDVEIKIKKIYCISSAAGLPIQIEDCMRVETKEEQ 211

Query: 114 VFGE---------------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA 158
           +                  +   +  R   R +D+R          ++ +    R  +  
Sbjct: 212 MKANMAELEEEKEGDENAPKAVGQKHRLDNRVIDMRAPAQLAIFKIQSAMGRYFREFLYT 271

Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
            +F E  TP L A++ EG  D       N  ++ A  Q+PQ YKQ+ +    +R F+I P
Sbjct: 272 LDFTEIHTPKLIATASEGGADVFKVGYFNGAAYLA--QSPQLYKQMAIIGDLERVFEIGP 329

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
            FR E   + R   EF  LD+EM+      + L  ++ +   +F             +R 
Sbjct: 330 VFRAEKSFTHRHLTEFVGLDLEMAIKSHYTEALEVIDKMFIYIFNRLETEFAKELEIIRA 389

Query: 278 CYDDAIRRYGTDKPDLRNP 296
            Y      Y   K +LR P
Sbjct: 390 QYPFESITY-NQKTNLRMP 407



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/151 (29%), Positives = 63/151 (41%), Gaps = 24/151 (15%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAF 480
           + LG I    +      DF   +      K      PF TMP     +L         + 
Sbjct: 435 RMLGEIIKEKYN----TDFFMVD------KFPMKLRPFYTMPCPEDPTL---------SN 475

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YD+   G EI+SG  R H  E++ +  +  G+    ++        AF+ G  PH G  
Sbjct: 476 SYDIYLRGEEISSGAQRIHDPELLQKVANEKGVDLTPIQP----YVDAFKYGAWPHAGCG 531

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G++RIVML LG  NVR+ S+FP   N    
Sbjct: 532 IGLERIVMLYLGLGNVRKTSMFPRDPNRVTP 562


>gi|121715316|ref|XP_001275267.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Aspergillus
           clavatus NRRL 1]
 gi|119403424|gb|EAW13841.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Aspergillus
           clavatus NRRL 1]
          Length = 574

 Score =  156 bits (395), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 68/342 (19%), Positives = 121/342 (35%), Gaps = 28/342 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VHR+R    +IFL + D YG  Q +   +      A ++     + I G +
Sbjct: 149 GTRVRVLGRVHRLRAQKDVIFLTLTDGYGYLQCILTGNLTKTYDALTLTIGTSMAIHGEM 208

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRR 135
            +   +    N      EL A    ++  A  ++  +      +      +  R L LR 
Sbjct: 209 RAVPPKQHAPNDR----ELHADFYTVIGRAAGDKEAITTRVAPDADPQTLYDNRHLVLRG 264

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +T    +  R   + + R        +E + P +  +  EG           + ++  L 
Sbjct: 265 ETSSAVLKVRAATLKAFRQTFEEHRMLEVTPPAMVQTQVEGGSTLFKFDYYGEDAY--LT 322

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+ Q Y +  + S     F + P FR E   + R   E+  ++ E+ F+   D+L+ +EN
Sbjct: 323 QSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEYTHIEGELDFITFTDLLDHLEN 381

Query: 256 VLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---II 298
           V+  V E                 +  T S  F R+ Y DAI                  
Sbjct: 382 VICRVIELTLADPATAALIKQLNPDFKTPSRPFRRMRYSDAIEWLREHDIPNEEGKPHQF 441

Query: 299 MHNVTEHFVHSEFRVFSKI--LSVNPGYEVWAIPAKGGGGNR 338
             ++ E        + ++   L+  P         K     R
Sbjct: 442 GDDIAEAAERKMTDIINQPIFLTHFPAEIKAFYMKKDPEDRR 483



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                   F M +   E  +  + + +      L+    EI  G +R    + ++ A+ +
Sbjct: 465 HFPAEIKAFYMKK-DPEDRRVTESVDV------LMPGVGEIVGGSMRMDDWDELMAAYKH 517

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+        +       + G  PHGG   G++R +  L     VR+ SL+P     C 
Sbjct: 518 EGMDPAP----YYWYTDQRKYGTSPHGGYGLGLERFLAWLCARYTVRDCSLYPRFTGRCK 573

Query: 571 L 571
            
Sbjct: 574 P 574


>gi|325183332|emb|CCA17790.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 505

 Score =  156 bits (395), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 92/286 (32%), Gaps = 28/286 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVR--PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
            V+ +   V + GW   +R    G   FL + D      +         E      +   
Sbjct: 41  SVTALNEIVTIKGWSKTLREAGAGSFAFLQLNDGSCFRSIQVVITKGETEGYADAIAS-- 98

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPESIRFKYR 129
               G   S   + + +     +IE+ A K+++  ++ +    P+  +R   E +R  + 
Sbjct: 99  -GGVGASFSVVGKVVQSPAKGQEIEIKASKVDVYGNIPDASTYPMSKKRHTLEHLRM-HA 156

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ- 188
            L  R +     +  R  +  +         F+   TPI+T S  EGA +    + +   
Sbjct: 157 HLRPRSNIHGATMRVRHAMAFATHEFFHTNGFLYIHTPIITTSDCEGAGEMFHVTTLLPK 216

Query: 189 -----------------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                              F+   A      Q             +   P FR E+  + 
Sbjct: 217 KANETIPRTSSGTVDYSKDFFDRAAYLSVSGQLNVETHCCALSDVYTFGPTFRAENSNTA 276

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           R   EF+ ++ E++F +    ++  E+ L+               F
Sbjct: 277 RHLAEFWMIEPEIAFADLKMNIDLAEDYLKYCARYALEHCREDLEF 322



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 4/93 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    EI  G  R    EV+ Q   + G + E  +          + 
Sbjct: 410 NDDGKTVAAADVLVPRVGEIIGGSQREERYEVLEQRIRDSGANVEDYQ----WYMDLRRY 465

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G  PH G   G +R++  + G +N+R+V  FP 
Sbjct: 466 GSVPHSGFGLGFERLIRFVTGIENIRDVIPFPR 498


>gi|315113222|pdb|2XTI|A Chain A, Asparaginyl-Trna Synthetase From Brugia Malayi Complexed
           With Atp:mg And L-Asp-Beta-Noh Adenylate:ppi:mg
 gi|315113223|pdb|2XTI|B Chain B, Asparaginyl-Trna Synthetase From Brugia Malayi Complexed
           With Atp:mg And L-Asp-Beta-Noh Adenylate:ppi:mg
          Length = 437

 Score =  156 bits (395), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 71/389 (18%), Positives = 123/389 (31%), Gaps = 23/389 (5%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
                 V + GW+HR+R  G  ++F  +RD  G  QV+          A +V +E  + I
Sbjct: 10  KHRNERVCIKGWIHRMRRQGKSLMFFILRDGTGFLQVLLMDKLCQTYDALTVNTECTVEI 69

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +                 EL A   +I+  A    +      E         R L +
Sbjct: 70  YGAIKEVPEG----KEAPNGHELIADFWKIIGNAPPGGIDNVLNEEASVDKMLDNRHLVI 125

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +     +  R     +MR       ++E + P L  +  EG           + SF  
Sbjct: 126 RGENAAALLRLRAAATRAMREHFYNAGYVEVAPPTLVQTQVEGGSTLFNLDYFGEQSF-- 183

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  + +     F IA  +R E  R+ R   E+  ++ E  F+  DD++  +
Sbjct: 184 LTQSSQLYLETCIPT-LGDVFCIAQSYRAEKSRTRRHLAEYAHVEAECPFITLDDLMEKI 242

Query: 254 ENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E ++    +                         FLR+ Y DAI+       +       
Sbjct: 243 EELVCDTVDRLLADEEAKKLLEHINPKFQPPERPFLRMEYKDAIKWLQEHNVENEFGNTF 302

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
               E    +  R  +  ++       +    K     R   D     +     PG+  I
Sbjct: 303 T-YGEDIAEAAERFMTDTINKPILLNRFPSEIKAFYMQRDAKDNTLTESVDLLMPGVGEI 361

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIR 388
                       +    K++ I       
Sbjct: 362 VGGSMRIWKFDELSKAFKNVEIDPKPYYW 390



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAF 508
            +       F M +   ++     +        DL+  G  EI  G +R    + + +AF
Sbjct: 327 NRFPSEIKAFYMQRDAKDNTLTESV--------DLLMPGVGEIVGGSMRIWKFDELSKAF 378

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            NV I  +     +         G  PHGG   G++R +  L    ++R+V L+P 
Sbjct: 379 KNVEIDPKP----YYWYLDQRLYGTCPHGGYGLGLERFICWLTNTNHIRDVCLYPR 430


>gi|2501025|sp|Q43776|SYK_SOLLC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1147585|emb|CAA64223.1| Lysyl-tRNA synthetase [Solanum lycopersicum]
          Length = 588

 Score =  156 bits (395), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 121/357 (33%), Gaps = 39/357 (10%)

Query: 22  RLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
            L+G V   R     + F ++       QV+A+   +  +  +   +       G ++  
Sbjct: 108 SLAGRVISKRASSSKLYFYELLGGGARVQVLASARDSDVDAVQ-FSNYQSGVKRGDIIGV 166

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPL---------------------------- 112
                      G++ + A+   +L+    +                              
Sbjct: 167 RG--YPGKSKRGELSIFAKPFIVLAPCLHMLPRRLTSSIVDETRTQNFQGITAYDTWTPG 224

Query: 113 ---PVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                       +  R++ R+LDL  +  +      R RII+ +R  +    F+E  TP 
Sbjct: 225 DLRNPESYVLRDQETRYRQRYLDLMMNPEVRALFRTRARIISYIRSFLDNLEFLEVETPS 284

Query: 169 LTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           +  ++    AR F+            +  +P+ Y + L+  GFDR +++   FR+E    
Sbjct: 285 MNLTAGGASARPFITHHNELDTELL-IRVSPELYLKKLVVGGFDRVYELGKHFRNEGMDL 343

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
              P EF   ++ M++ + +D+++  E +L G+ ++ +    +  +   +  +     + 
Sbjct: 344 THSP-EFTMCELYMAYADYNDLMDLTEQLLSGMVKDLTGSYKIRYHANGLDNEPIEIDFT 402

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
                +     +  V    +  +    S    +    E + +            D++
Sbjct: 403 PPFRKIDMLSELEKVANISIPRDLSSESANKHLVDVCEKFDVKCPPPHTTTRLLDKL 459



 Score = 84.0 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++L  N  E+       +      + F+     +++ ++           A +
Sbjct: 491 EPGLTERFNLFVNRRELCDAYTELNDPTAQRERFAEQLKDRQLGDDEAMDLDESFITALE 550

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG+  GIDR+ MLL  ++NV+EV LFP  +
Sbjct: 551 YGLPPTGGLGMGIDRLTMLLTDSQNVKEVILFPAMR 586


>gi|294155984|ref|YP_003560368.1| lysine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291599887|gb|ADE19383.1| lysine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 491

 Score =  156 bits (395), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 64/322 (19%), Positives = 124/322 (38%), Gaps = 35/322 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEIAKSVRSEWVLCIDGLVM 78
           V +SG +  +R      F+ I+D++G  QV  N   D    ++  S     ++ + G+VM
Sbjct: 62  VSISGRIISMRGP----FILIKDYHGKIQVYFNKKEDEKLAKLVDSFDLGDIISVSGIVM 117

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                       T +I + +QKIE+L+ + + PLP           +++ R++DL  +  
Sbjct: 118 ---------KTHTNEIAIRSQKIELLTKSLK-PLPDKYHGLTDIEEKYRRRYVDLIVNED 167

Query: 139 HKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
            K     RT++++ +R       ++E  TP L    S   AR F          F  L  
Sbjct: 168 SKKVFWTRTKVVSEIRKYFDELEYMEVETPFLHDYISGAAARPFKTHHNALDQEF-VLRI 226

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A +   + L+  G DR +++   FR+E   +   P EF  ++   ++   + ++   E V
Sbjct: 227 ATEIPLKKLLVGGVDRVYEMGRIFRNEGIDTTHNP-EFTTIEFYEAYSNLEGMMKRTEEV 285

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
            + + +       ++N                 + DL  P    ++ +    +    F K
Sbjct: 286 FKRIAKRLGKYKYINN---------------GVEIDLSKPFKRLDMVDAVSEATGEDFRK 330

Query: 317 ILSVNPGYEVWAIPAKGGGGNR 338
           I              K    ++
Sbjct: 331 ISFEKACDIAKKNKIKVEKFHK 352



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 6/126 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E K I+         +    S K +D       + +L  N  E ++        
Sbjct: 360 LFEELIEHKLIEPTFVTGHPIEISPLSAKMDDPR--FTERAELFINTKEYSNMYTELSDP 417

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
              L+ F      K    +           A + GMPP GG   GIDR+VML    +++R
Sbjct: 418 IDQLERFEAQISEKNAGNDEATDIDYDFVDALEYGMPPAGGCGIGIDRLVMLFSEKESIR 477

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 478 DVLLFP 483


>gi|319760547|ref|YP_004124485.1| asparaginyl-tRNA synthetase [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039261|gb|ADV33811.1| asparaginyl-tRNA synthetase [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 468

 Score =  156 bits (395), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 51/274 (18%), Positives = 96/274 (35%), Gaps = 24/274 (8%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            + + + GW+  +R     I FLD+ D   +  +         E   + +SE +    G 
Sbjct: 17  NTKITVHGWIRTLRHSKAKISFLDLYDGSCLKTLQIVIG----ENLHNYKSEILHLTSGC 72

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            ++   + + +      IEL A  + IL   ++        +++          L  R  
Sbjct: 73  SVTICGKIVKSIGNKQDIELVATNVTILGWIDQPNTYPITPKKHSLEYLRNVAHLRSRTH 132

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL--------------- 181
                   R  +  SM   M  +  +   TPI+TA+  EG                    
Sbjct: 133 IFGAISRIRHILFQSMHNFMHKKGLLWIPTPIITAADTEGNSKMFYLSENFNNKNISNNI 192

Query: 182 VPSRVNQGSFY----ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
             ++VN   F+    A      Q      A    + +   P FR E   ++R   EF+ L
Sbjct: 193 STNQVNGEQFFFGKKAFLTVSGQLNLETYACALSKVYTFGPTFRAEHSDTNRHLSEFWML 252

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           ++E++F + +DI+   +  L  + +      T  
Sbjct: 253 EVEIAFSKLNDIIELAKAFLTNMIQIVLEQCTPD 286



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 4/93 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    EI  G  R     ++ +      +S       +       + 
Sbjct: 373 NDDNKTVASMDILVPGIGEIIGGSQREERLNILKERLLENNLSN----KYYWWYQDLRRY 428

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G  PH G   G +R+++ + G  N+++   FP 
Sbjct: 429 GTVPHSGFGLGFERLLIYITGITNIKDAIPFPR 461


>gi|315113190|pdb|2XGT|A Chain A, Asparaginyl-Trna Synthetase From Brugia Malayi Complexed
           With The Sulphamoyl Analogue Of Asparaginyl-Adenylate
 gi|315113191|pdb|2XGT|B Chain B, Asparaginyl-Trna Synthetase From Brugia Malayi Complexed
           With The Sulphamoyl Analogue Of Asparaginyl-Adenylate
          Length = 435

 Score =  156 bits (395), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 72/390 (18%), Positives = 125/390 (32%), Gaps = 25/390 (6%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
                 V + GW+HR+R  G  ++F  +RD  G  QV+          A +V +E  + I
Sbjct: 8   KHRNERVCIKGWIHRMRRQGKSLMFFILRDGTGFLQVLLMDKLCQTYDALTVNTECTVEI 67

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +                 EL A   +I+  A    +      E         R L +
Sbjct: 68  YGAIKEVPEG----KEAPNGHELIADFWKIIGNAPPGGIDNVLNEEASVDKMLDNRHLVI 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +     +  R     +MR       ++E + P L  +  EG           + SF  
Sbjct: 124 RGENAAALLRLRAAATRAMREHFYNAGYVEVAPPTLVQTQVEGGSTLFNLDYFGEQSF-- 181

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  + +     F IA  +R E  R+ R   E+  ++ E  F+  DD++  +
Sbjct: 182 LTQSSQLYLETCIPT-LGDVFCIAQSYRAEKSRTRRHLAEYAHVEAECPFITLDDLMEKI 240

Query: 254 ENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E ++    +                         FLR+ Y DAI+       +       
Sbjct: 241 EELVCDTVDRLLADEEAKKLLEHINPKFQPPERPFLRMEYKDAIKWLQEHNVENEFGNTF 300

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR-AFCDRMNEWARSQGQPGLAY 358
               E    +  R  +  ++       +    K     R A  + + E       PG+  
Sbjct: 301 T-YGEDIAEAAERFMTDTINKPILLNRFPSEIKAFYMQRDAQDNTLTESVDLL-MPGVGE 358

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIR 388
           I            +    K++ I       
Sbjct: 359 IVGGSMRIWKFDELSKAFKNVEIDPKPYYW 388



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAF 508
            +       F M +   ++     +        DL+  G  EI  G +R    + + +AF
Sbjct: 325 NRFPSEIKAFYMQRDAQDNTLTESV--------DLLMPGVGEIVGGSMRIWKFDELSKAF 376

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            NV I  +     +         G  PHGG   G++R +  L    ++R+V L+P 
Sbjct: 377 KNVEIDPKP----YYWYLDQRLYGTCPHGGYGLGLERFICWLTNTNHIRDVCLYPR 428


>gi|238923547|ref|YP_002937063.1| aspartyl-tRNA synthetase, non-discriminating [Eubacterium rectale
           ATCC 33656]
 gi|238875222|gb|ACR74929.1| aspartyl-tRNA synthetase, non-discriminating [Eubacterium rectale
           ATCC 33656]
          Length = 461

 Score =  156 bits (395), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 75/307 (24%), Positives = 114/307 (37%), Gaps = 19/307 (6%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L     G  +++ G +H +R  G + F+ +R   G+ Q V  P  + F +   ++    +
Sbjct: 37  LAGDYEGKNIKVKGAIHTIRDMGEVAFIVLRRRDGLVQCVYEPGKSQFSV-DDLKEADTV 95

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLP-VFGEREYPESIRFKYR 129
            + G   S               EL    I ILS  AE +PL     +       +   R
Sbjct: 96  EVCGTYKSDDRS-------PNGFELRLDTIIILSEPAEPMPLQINKWKLNTSLEAKLNNR 148

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            + LR          +  I    R  +    F E  TP L A S EG  +       ++ 
Sbjct: 149 AVALRNPRERATFRIQEGITRGFRDFLYNNGFTEIHTPKLGAKSAEGGANLFKLEYFHRP 208

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDD 248
           +   L Q+PQ YKQ +M   FDR F+ AP FR E   + R   E+  LD EM +++  +D
Sbjct: 209 AI--LQQSPQFYKQ-MMVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFED 265

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I+      L+   E            L+I   D      T  P +R       V E +  
Sbjct: 266 IMEMETGFLQYTMELLKTSYAKELELLKIKLPDV-----TSIPRVRFDEAKQRVAEKYNR 320

Query: 309 SEFRVFS 315
                F 
Sbjct: 321 QFRNPFD 327



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF            +         +DL+  G EI 
Sbjct: 347 DFVFVTHYP------------SKKRPFYAM--------DDPADETYTLSFDLLFRGLEIT 386

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H    +++  +  G+  E +E+       AF+ GMPPHGG+  G++R+ M L+G
Sbjct: 387 TGGQRIHDYNKLMEKIAKRGMETEGMES----YLSAFKYGMPPHGGLGIGLERLTMQLIG 442

Query: 553 AKNVREVSLFPMSQNFCDL 571
             NVRE +LFP   +  + 
Sbjct: 443 EDNVREATLFPRDLSRLEP 461


>gi|68534368|gb|AAH99099.1| Asparaginyl-tRNA synthetase [Rattus norvegicus]
          Length = 404

 Score =  156 bits (395), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 62/323 (19%), Positives = 113/323 (34%), Gaps = 22/323 (6%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           FL +RD  G  Q V + D         + +E  + + G +              G  ELS
Sbjct: 2   FLVLRDGTGYLQCVLSDDLCQCYNGVVLSTESSVAVYGTLNLTPKG----KQAPGGHELS 57

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157
               E++ +A           E    ++   R + +R + + K +  R+ I    R    
Sbjct: 58  CDFWELVGLAPAGGADNLINEESDVDVQLNNRHMMIRGENMSKILKARSMITRCFRDHFF 117

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
              + E +TP L  +  EG           + +F  L Q+ Q Y +  +       F IA
Sbjct: 118 DRGYCEVTTPTLVQTQVEGGATLFKLDYFGEEAF--LTQSSQLYLETCLP-ALGDVFCIA 174

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS------------ 265
             +R E  R+ R   EF  ++ E  F+  +D+L+ +E+++  V +               
Sbjct: 175 QSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLSRLEDLVCDVVDRVLKSPVASIVYDLN 234

Query: 266 -NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
            N       F R+ Y DAI           +    +   +    +  R+ +  ++     
Sbjct: 235 PNFKAPKRPFRRMNYSDAIEWLREHDVKKEDG-TFYEFGDDIPEAPERLMTDTINEPILL 293

Query: 325 EVWAIPAKGGGGNRAFCD-RMNE 346
             + +  K     R   D R+ E
Sbjct: 294 CRFPVEIKSFYMQRCPEDPRLTE 316



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 321 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 376

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  +L   ++R+V L+P 
Sbjct: 377 ERFLSWILNRYHIRDVCLYPR 397


>gi|290559649|gb|EFD92977.1| tRNA synthetase class II (D K and N) [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 476

 Score =  156 bits (395), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 11/244 (4%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G   +++G +   R HG I F+DI+D  G  Q+  +      E  K      V  I G+ 
Sbjct: 46  GKDEKIAGRIIAKRDHGTIKFIDIQDETGTIQIYFSNKHVNKESIKIAELLDVGDIIGVY 105

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            S           T +I + A+++ ILS +     P +   E     RF+ R+LDL  + 
Sbjct: 106 GSV------VKTKTDEISIDAKEVVILSKSLLPLPPRWYGLE-DTEKRFRKRYLDLIINR 158

Query: 138 LHKNIVKRTRIINS-MRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
                +K+  I+ S +R  +  + + E   PIL        A+ F+         FY L 
Sbjct: 159 ESMEKIKKGSIMVSKIREILGKKGYTEVVVPILQPIPGGANAKPFITHYNSLDRDFY-LK 217

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + Y + L+  GF++ F I+  FR+E   +   P EF  L+   ++ +   +L   E 
Sbjct: 218 IASELYLKRLLVGGFEKVFDISKNFRNEGIDTRHNP-EFMMLEAYQAYGDLSSMLELTEE 276

Query: 256 VLRG 259
           +++ 
Sbjct: 277 IIKE 280



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 56/148 (37%), Gaps = 25/148 (16%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           I+ N     ++  FP                   +    +     +D   +  ++++L  
Sbjct: 350 ISDNIINPVFVTKFP-------------------IEVSPLAKNMEDDPRFV--YRFELYI 388

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAG 542
            G EIA+     +     ++ F      K       +     +  A   GMPP GG+  G
Sbjct: 389 AGMEIANAFSELNNPIEQIKRFEEEARRKNKGIDETQEFDKDVIEALGYGMPPTGGVGIG 448

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           IDRI ML   +K+++EV  FP  + F D
Sbjct: 449 IDRIQMLGTNSKSIKEVIPFPQLRTFED 476


>gi|119616025|gb|EAW95619.1| lysyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
          Length = 441

 Score =  156 bits (395), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 97/253 (38%), Gaps = 14/253 (5%)

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           +S  ++  +           G ++             G++ +   +I +LS      LP 
Sbjct: 3   NSRNYKSEEEFIHINNKLRRGDIIGVQGNP--GKTKKGELSIIPYEITLLSPCL-HMLPH 59

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                  +  R++ R+LDL  +   +   + R++II  +R  +    F+E  TP++    
Sbjct: 60  LHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIP 119

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P 
Sbjct: 120 GGAVAKPFITYHNELDMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP- 177

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF   +  M++ +  D++   E ++ G+ +  +          ++ Y            D
Sbjct: 178 EFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSY-------KVTYHPDGPEGQAYDVD 230

Query: 293 LRNPIIMHNVTEH 305
              P    N+ E 
Sbjct: 231 FTPPFRRINMVEE 243



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 323 KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 382

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 383 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMK 418


>gi|242803977|ref|XP_002484282.1| aspartyl-tRNA synthetase, cytoplasmic [Talaromyces stipitatus ATCC
           10500]
 gi|218717627|gb|EED17048.1| aspartyl-tRNA synthetase, cytoplasmic [Talaromyces stipitatus ATCC
           10500]
          Length = 946

 Score =  156 bits (395), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 139/367 (37%), Gaps = 29/367 (7%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSA-----CFEIAK 63
            D+    +G  V     +H +R     ++FL  R      Q V + +           A+
Sbjct: 131 ADISTDLIGKEVTFVARLHIIRNMSAKLVFLVFRQQLTTFQGVLHAEEGKKSLGMVNWAE 190

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL---------SVAEELPLPV 114
            +R+  ++ + G++   +   +        +E+S +++ ++         SV E      
Sbjct: 191 RLRTGTIVRVRGIMQKPAVPVLGCTYH--DVEISIEQLHVVVRREDSVPFSVYEAEIRTE 248

Query: 115 FGER------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
             +R        P+  R   R LDLR  T       ++ + N  R  +    FIE  TP 
Sbjct: 249 EEDRVEGRFSHIPDRTRLSNRILDLRTGTAQAIFRIQSAVGNLWRAALDERGFIEIHTPK 308

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L  S+ E        +   + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + 
Sbjct: 309 LQGSATESGASVFELNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTH 366

Query: 229 RLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTV--SNNFLRICYDDAIRR 285
           R   E+  LD+EM+  E   ++L T++ VLR +     +           +   +D +  
Sbjct: 367 RHLTEYTGLDIEMAIDEHYHEMLETIDAVLRHIITGIYSKYRREVEAVKHQFPSNDVVLA 426

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRV-FSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
             T     +  + + N +         V   + L+      +  +  +  G +    D+ 
Sbjct: 427 EKTPVIPFQEAVKLLNESGWRTEDGKEVPDDEDLATRDEIRLGEVVKEKYGTDYYIIDKF 486

Query: 345 NEWARSQ 351
              AR  
Sbjct: 487 PVSARPF 493



 Score = 93.6 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 45/121 (37%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   +  PF                      +D+   G EI SGG R H   ++      
Sbjct: 485 KFPVSARPFYTMPDAN--------NPGYTNSFDIFVRGQEIVSGGQRIHDPSMLEDNMKK 536

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           VGI    +E+        F+ G PPH G   G++R VMLLL   N+R  SLF        
Sbjct: 537 VGIKPSDMED----YLEGFRWGAPPHAGAGVGLERFVMLLLKLGNIRLASLFHRDPKSFP 592

Query: 571 L 571
            
Sbjct: 593 P 593


>gi|295395579|ref|ZP_06805773.1| lysine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971598|gb|EFG47479.1| lysine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 500

 Score =  156 bits (395), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 59/273 (21%), Positives = 110/273 (40%), Gaps = 20/273 (7%)

Query: 5   RTHSCGDLGVS----DVGSFVR----LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTH+  ++  +    + G        + G V   R  G + F+ ++   G          
Sbjct: 38  RTHTLQEIREAYPHLEAGEETDDRAGVVGRVVFFRNTGKLCFVTLQSGDGT---RLQGML 94

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +  E+ +     W   +D G ++      I +    G++ + A + E+ + A     P  
Sbjct: 95  SLAEVGQEALDAWKADVDLGDIVFLEGRVICSK--RGELSIFASRWEMAAKAIRPLPPQ- 151

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASS 173
              E  +  R + R+LDL  R+   K +  R+ ++ S+R       F+E  TP+L T  S
Sbjct: 152 -HTELGDEGRMRQRYLDLIMREDARKTVHIRSDVMKSLRKTFDERGFLEIETPMLQTIPS 210

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F           Y L  AP+ + +  +  G ++ F+I   FR+E   S   P E
Sbjct: 211 GAAARPFSTHMNAYDMELY-LRIAPELFLKRAVVGGLEKVFEINRNFRNEGADSTHSP-E 268

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           F  L+   ++ +   I    + +++   EE + 
Sbjct: 269 FAMLEAYEAYGDYSTIGELTKKLIQNAAEEATG 301



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 53/154 (34%), Gaps = 28/154 (18%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                 + +         +E  ++ DFP      +   +   H                 
Sbjct: 364 GKLVEEMWEHF--YQDKLWEPTFVTDFPV-----DTSPLVREHR---------------- 400

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
                  ++DL   GFE+A+G        V  + F     +    ++           A 
Sbjct: 401 SKPGVVEKWDLYVRGFELATGYSELVDPVVQRERFEAQTRNAAKGDDEAMPLDEDFLTAM 460

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           + GMPP GG+  GIDR++M L G   +RE  LFP
Sbjct: 461 EFGMPPSGGMGMGIDRLLMALTGLG-IRETILFP 493


>gi|326422505|gb|EGD71901.1| tRNA synthetase class II (D K and N) [Candidatus Parvarchaeum
           acidophilus ARMAN-5_'5-way FS']
          Length = 476

 Score =  156 bits (395), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 11/244 (4%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G   +++G +   R HG I F+DI+D  G  Q+  +      E  K      V  I G+ 
Sbjct: 46  GKDEKIAGRIIAKRDHGTIKFIDIQDETGTIQIYFSNKHVNKESIKIAELLDVGDIIGVY 105

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            S           T +I + A+++ ILS +     P +   E     RF+ R+LDL  + 
Sbjct: 106 GSV------VKTKTDEISIDAKEVVILSKSLLPLPPRWYGLE-DTEKRFRKRYLDLIINR 158

Query: 138 LHKNIVKRTRIINS-MRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALP 195
                +K+  I+ S +R  +  + + E   PIL        A+ F+         FY L 
Sbjct: 159 ESMEKIKKGSIMVSKIREILGKKGYTEVVVPILQPIPGGANAKPFITHYNSLDRDFY-LK 217

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            A + Y + L+  GF++ F I+  FR+E   +   P EF  L+   ++ +   +L   E 
Sbjct: 218 IASELYLKRLLVGGFEKVFDISKNFRNEGIDTRHNP-EFMMLEAYQAYGDLSSMLELTEE 276

Query: 256 VLRG 259
           +++ 
Sbjct: 277 IIKE 280



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 55/148 (37%), Gaps = 25/148 (16%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           I+ N     ++  FP                   +    +     +D   +  ++++L  
Sbjct: 350 ISDNIINPVFVTKFP-------------------IEVSPLAKNMEDDPRFV--YRFELYI 388

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAG 542
            G EIA+     +     ++ F      K       +        A   GMPP GG+  G
Sbjct: 389 AGMEIANAFSELNNPIEQIKRFEEEARRKNKGIDETQEFDKDFIEALGYGMPPTGGVGIG 448

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           IDRI ML   +K+++EV  FP  + F D
Sbjct: 449 IDRIQMLGTNSKSIKEVIPFPQLRTFED 476


>gi|146322444|ref|XP_750194.2| lysyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|129557020|gb|EAL88156.2| lysyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
          Length = 566

 Score =  156 bits (395), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 75/330 (22%), Positives = 130/330 (39%), Gaps = 23/330 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFE 60
            RY +H   +  V D    V ++G +   R  G  +IF DI       QV+ N       
Sbjct: 94  ERY-SHLTSNQTVED--DTVVVNGRIRAYRLAGSKLIFFDIFQDGHKVQVMCNIRKLDGV 150

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
              + +  + L   G   S +         TG++ + A ++  L       +PV  E   
Sbjct: 151 APDAFKRFYRLLRRGDTFSVTGNPH--RTGTGELTVLATELPRLLAPCLHDVPVDAEEHE 208

Query: 121 PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-AR 178
                   R +    D    +I++ R+ II  +R   +  +F+E STPI+ + +    AR
Sbjct: 209 TSPYP---RHVQFLADQKAADIIRARSAIIQFLRQFFLDRSFMEVSTPIIGSIAGGAIAR 265

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F   +        +L  AP+ + + L+  GFD+ F+I P FR+E       P EF   +
Sbjct: 266 PFQTSATEFPDRQLSLRIAPELWLKRLVVGGFDKVFEIGPSFRNEGLDKTHNP-EFTTCE 324

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGN----------TVSNNFLRICYDDAIR-RYG 287
              ++   +D+++  EN+L G+       N            S  F R+ +   I  + G
Sbjct: 325 FYHAYANLEDLMSITENLLSGMAAHIQEFNKNASLKPPEVDFSAPFRRVDFTTGIEGKIG 384

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
              PDL  P  +  V++ F      +  + 
Sbjct: 385 RRLPDLTTPDALDQVSQLFRDLSLPIPKEP 414



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 3/87 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS---NVGISKEVVENRFGGLYRAFQCGMPP 535
           A + +L  +G EI +     +      + F          +           A + G+P 
Sbjct: 462 AARAELFIDGREIVNTYEEENSPFEQRRKFEDQVRYTKGTDEPAEIDESYLEALEWGLPS 521

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLF 562
            GG   GIDR+ ML  G K + +V  F
Sbjct: 522 TGGWGCGIDRLCMLFTGTKRIGDVLPF 548


>gi|73956992|ref|XP_861443.1| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 5 [Canis familiaris]
          Length = 437

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 93/226 (41%), Gaps = 14/226 (6%)

Query: 50  VVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
           +    +     I   +R   ++ + G                G++ +   +I +LS    
Sbjct: 1   MNYKSEEEFIHINNKLRRGDIIGVKG---------NPGKTKKGELSIIPYEITLLSPCL- 50

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPI 168
             LP        +  R++ R+LDL  +   +   + R++II  +R  +    F+E  TP+
Sbjct: 51  HMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPM 110

Query: 169 LTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           +        A+ F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E    
Sbjct: 111 MNIIPGGAVAKPFITYHNELDMNLY-MRIAPELYHKILVVGGIDRVYEIGRQFRNEGIDL 169

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
              P EF   +  M++ +  D++   E ++ G+ +  +    V+ +
Sbjct: 170 THNP-EFTTCEFYMAYADYHDLMEITEKMISGMVKHITGSYKVTYH 214



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 319 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 378

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 379 YGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFPAMK 414


>gi|70989689|ref|XP_749694.1| cytoplasmic asparaginyl-tRNA synthetase [Aspergillus fumigatus
           Af293]
 gi|66847325|gb|EAL87656.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Aspergillus
           fumigatus Af293]
 gi|159129102|gb|EDP54216.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Aspergillus
           fumigatus A1163]
          Length = 574

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/285 (21%), Positives = 111/285 (38%), Gaps = 23/285 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            G+ VR+ G VHR+R    +IFL + D YG  Q V   +      A ++  E  + I G 
Sbjct: 148 AGTRVRVLGRVHRLRVQKDVIFLTLSDGYGYLQCVLTGNLTKTYDAMTLTLETSMAIHGE 207

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLR 134
           + +   +    N      EL A    ++  A  ++  +     ++      +  R L LR
Sbjct: 208 MRAVPPKQHAPNDR----ELHADFFTVIGRAAGDKEAITTRVAKDADPQTLYDNRHLVLR 263

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +     +  R   + + R     +  +E + P +  +  EG           + ++  L
Sbjct: 264 GEISSAVMKVRAACLKAFRQVFEEKRMLEVTPPAMVQTQVEGGSTLFKFDYYGEDAY--L 321

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y +  + S     F + P FR E   + R   E+  ++ E+ F+   D+L+ +E
Sbjct: 322 TQSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEYTHIEAELDFITFTDLLDHLE 380

Query: 255 NVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRR 285
            V+  V E                 +    S  F R+ Y DAI+ 
Sbjct: 381 EVICRVIELTLANPATAALIKQLNPDFKPPSRPFRRMKYADAIQW 425



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                   F M +   E  +  + + +      L+    EI  G +R    + ++ A+ +
Sbjct: 465 HFPAEIKAFYMKK-DPEDRRVTESVDV------LMPGVGEIVGGSMRMDDWDELMAAYKH 517

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+        +       + G  PHGG   G++R +  L     VR+  L+P     C 
Sbjct: 518 EGMDPTP----YYWYTDQRKYGTSPHGGYGLGLERFLAWLCARYTVRDCCLYPRFTGRCT 573

Query: 571 L 571
            
Sbjct: 574 P 574


>gi|149183168|ref|ZP_01861616.1| asparaginyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148849103|gb|EDL63305.1| asparaginyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 371

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 63/271 (23%), Positives = 105/271 (38%), Gaps = 31/271 (11%)

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           AKS+  E  L + G++   S             E+  + IE++  + + P+     +E+ 
Sbjct: 1   AKSITQETSLYVTGVIQEDSRSPF-------GYEMQVKDIEVIHESVDYPITP---KEHG 50

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                  R L LR    H  +  R  II +       E F++   PILT S+PEG  +  
Sbjct: 51  TEFLMDNRHLWLRSRRQHAVMKVRNEIIRATYEFFNKEGFVKVDPPILTGSAPEGTSELF 110

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 + ++  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM
Sbjct: 111 HTKYFEEDAY--LSQSGQLYMEAA-AMALGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEM 167

Query: 242 SFVEQDDILNTMENVLRGVFEEF---------------SNGNTVSNNFLRICYDDAIRRY 286
           +F E +D L   E  +  V +                 S    +   F RI YD+A++  
Sbjct: 168 AFYEHEDSLKVQEEYVSHVVQSVLENCKLDLERLGRDTSKLENIKAPFPRITYDEAVKFL 227

Query: 287 ---GTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
              G D  +  +     + T      +  VF
Sbjct: 228 KEKGFDDIEWGDDFGAPHETAIAESYDKPVF 258



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 60/194 (30%), Gaps = 31/194 (15%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI-----INCNCF 432
            L++        +L+            + +KF             + G      I  +  
Sbjct: 195 KLDLERLGRDTSKLENIKAPFPRITYDEAVKFLKEKGFDDIEWGDDFGAPHETAIAESYD 254

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES--LKGNDLLSIKAFQYDLVCNGFE 490
           +  +I  +P             +  PF M         +   DL++ + +         E
Sbjct: 255 KPVFITHYP------------TSLKPFYMQPDPNREDVVLCADLIAPEGYG--------E 294

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R H  E++ Q      +        +       + G  PH G   G++R V  +
Sbjct: 295 IIGGSERLHDHEILSQRIEEHDLDP----EAYKWYLELRKYGSVPHSGFGLGLERTVAWI 350

Query: 551 LGAKNVREVSLFPM 564
            G ++VRE   FP 
Sbjct: 351 SGVEHVRETIPFPR 364


>gi|289619755|emb|CBI54038.1| unnamed protein product [Sordaria macrospora]
          Length = 618

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 109/262 (41%), Gaps = 17/262 (6%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIR---DHYGI--------TQVVANPDSACFEIAK-SV 65
             +R++G ++ +R  G  +IF DIR   D   I           +A      FE     +
Sbjct: 127 KELRIAGRIYNIRTAGAKLIFYDIRTSADTKSIGTRMQVVCQAQLAKEGGVPFEKQHAHL 186

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           R   ++ I G     + + +      G++ + A ++++LS      LP           R
Sbjct: 187 RRGDIIGIVGYPGRTNPKNLK-EGEQGELSVFATEVQLLSPCL-HMLPSVRYPFADAEQR 244

Query: 126 FKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
            + R+LD L  D   + + +R+R++  +R       FIE  TP++ A +        V  
Sbjct: 245 ARMRYLDMLWNDRSRETLWQRSRMVRYIRDFFHERRFIEVETPMMHAIAGGATALPFVTH 304

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             +      +  AP+ + + ++   F + F++   FR+E       P EF  ++   ++ 
Sbjct: 305 HNDLDMDMFMRVAPELFLKKMIVGQFGKVFEMGKNFRNEGIDLTHNP-EFTSIEFYWAYA 363

Query: 245 EQDDILNTMENVLRGVFEEFSN 266
           +  D+++  E ++  + +E + 
Sbjct: 364 DVYDLMSITEELVSSLVKELTG 385



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 13/120 (10%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
            +    +++      EIA+     +        F      K+  ++           A +
Sbjct: 495 KNGLCERFEAFVCKKEIANAYTELNNPFDQRLRFEEQARQKDQGDDEAQLVDESFLNALE 554

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP---------MSQNFCDLLMGSPSTVSV 581
            G+PP GG   GIDR+ M L    ++REV  FP           ++  +L    P  V  
Sbjct: 555 YGLPPTGGWGLGIDRLAMFLTDNYSIREVLAFPFLREEKTAHKDKHAAELAGVEPLPVEE 614


>gi|260950931|ref|XP_002619762.1| hypothetical protein CLUG_00921 [Clavispora lusitaniae ATCC 42720]
 gi|238847334|gb|EEQ36798.1| hypothetical protein CLUG_00921 [Clavispora lusitaniae ATCC 42720]
          Length = 556

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 75/342 (21%), Positives = 123/342 (35%), Gaps = 20/342 (5%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQ--VVANPDSACFEIAKSV 65
             DL  ++ G  V      H  R  G  + FL  R    + Q  + AN  +   ++ K  
Sbjct: 97  IKDLSAANDGEEVVFRARAHNSRQQGATMAFLTFRQQDSLIQGLIKANGSTVSKQMVKWA 156

Query: 66  RSEWVLCIDGLVMSRSAETINANIIT-GQIELSAQKIEILSVAEELPLPVFGER------ 118
            +  +  I  +              T    E+   KI  +    E    +  +       
Sbjct: 157 GAINLESIVVVTGVVKKVEEPIKSATIQDAEIMISKIYTIQETPEQLPMLIEDAIRSDAD 216

Query: 119 -------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
                        R   R +DLR  T       +  I    R  + ++ F E  TP +  
Sbjct: 217 AEAAGLPVVNLDTRLDARVIDLRTPTNQAIFKIQHGICALFREFLSSKGFTEIHTPKILG 276

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           S+ EG  +    S   + ++ A  Q+PQ YKQ L+A+ F++ F++AP FR E+  + R  
Sbjct: 277 SASEGGSNVFEVSYFKRSAYLA--QSPQFYKQQLIAADFEKVFEVAPVFRAENSNTHRHM 334

Query: 232 GEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
            EF  LD+EM+F E  D ++  +EN+   +F E  N        +R  Y     +   D 
Sbjct: 335 TEFVGLDLEMAFEEHYDEVMEVLENLFIFIFTELKNRYAKEIATVRKQYPVEEFKLPADG 394

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
             +R               E   F  + + N       +  K
Sbjct: 395 KMVRLHFKEGIAMLRAAGKEVDDFEDLSTENEKLLGKLVRDK 436



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 45/119 (37%), Gaps = 12/119 (10%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF TMP                +  YD    G EI SG  R H  E++ +   
Sbjct: 446 KFPLAVRPFYTMPCPEDPRY---------SNSYDFFMRGEEILSGAQRIHDPELLKERMK 496

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
              +      +       AF  G  PH G   G++R++M  L  KN+R  SLFP     
Sbjct: 497 AHEVDYT--MDGVSDYVDAFTYGCAPHAGGGIGLERVLMFFLDLKNIRRASLFPRDPKR 553


>gi|302793741|ref|XP_002978635.1| hypothetical protein SELMODRAFT_418417 [Selaginella moellendorffii]
 gi|300153444|gb|EFJ20082.1| hypothetical protein SELMODRAFT_418417 [Selaginella moellendorffii]
          Length = 531

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 92/570 (16%), Positives = 188/570 (32%), Gaps = 71/570 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G +  G  + + GW+   R H G++FL + D    + +    D       + + +   + 
Sbjct: 22  GAALAGQTLCVGGWIKSRRTHRGVVFLALSDGSCASSLQVIVDPEKELDTEQLHTGSCVL 81

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G ++    +          +EL A++    + A+    P+   +  PE +R     L 
Sbjct: 82  VKGELVLSPGKGQA-------VELHAREFLHAAPADASKYPIAKTKLPPEFLR---TVLH 131

Query: 133 LRRDT--LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LR  T  +      R+ ++ +       + FI   TPI+T S  EGA +    + +    
Sbjct: 132 LRPRTDLISSVARIRSALVLATHTFFQQQGFIHVHTPIITTSDCEGAGEMFQVTTLLAPE 191

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                 AP Q +   + +  +   +     R           E      ++   + ++  
Sbjct: 192 KREHLVAPTQDQ---IDAARELVTRCGDTVRKLKENKSSSKAEIGDAVKQLKAAKDEE-A 247

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD-------KPDLRNP--IIMHN 301
             ++    G   ++S        FL +        Y           P  R        +
Sbjct: 248 RLVKRAEDG-GADYSADFFGRPAFLTVSGQLQAETYACALSNVYTFGPTFRAEQSHTSRH 306

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
           + E  +      F+++       E +         +R + D             +  +  
Sbjct: 307 LAEFLMVEPELAFAELKDDMDCAEDYVKFMCQWLLDRCYDD-------------IKLMDD 353

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIA 421
           +L ESG +  +  V        T    + +  +  D  F    +       A++   ++A
Sbjct: 354 KLTESGALERLQNVVSAPFARITYTQAIEMLKEVKDFTFDTPVEWGM--DLASEHERYLA 411

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           ++L        +  ++ D+P             A   F M        + ND     A  
Sbjct: 412 EQLFQ------KPVFVYDYP------------KAIKAFYM--------RVNDDGQTVAAM 445

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    E+  G  R    EV++Q    + +      + +       + G   H G   
Sbjct: 446 DMLVPKVGELVGGSQREERYEVLVQRLEELELPL----DSYEWYLDLRRYGSVKHSGFGL 501

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R+++ + G +N+R+V  FP S    +L
Sbjct: 502 GFERMLLFVTGLENIRDVIPFPRSTGKAEL 531


>gi|156095123|ref|XP_001613597.1| aspartate-tRNA ligase [Plasmodium vivax SaI-1]
 gi|148802471|gb|EDL43870.1| aspartate-tRNA ligase, putative [Plasmodium vivax]
          Length = 631

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 69/308 (22%), Positives = 125/308 (40%), Gaps = 24/308 (7%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-----PDSACFEIAKSVRSEWVLCI 73
           S + + G +H +R  G + F+ +R      Q + +      D    +   ++  E ++ I
Sbjct: 183 SDIWVRGRIHDIRSKGSLAFIILRHKLYSMQCILDIKHNDNDKNMMKWVSNLPLESIVDI 242

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSV-----------AEELPLPVFGEREYPE 122
            G +        + NI     E   +KI  +S            A        G  +  +
Sbjct: 243 KGKLSKPEVPIDSTNIK---YEAHIRKIFCISKTAKELPFLLKDANMKETNEEGSIKVNQ 299

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R   R +DLR    +     +++I    +  ++  NFIE  TP L   S EG  +   
Sbjct: 300 DNRLNNRCVDLRTYANYSIFCLQSQICTIFKNFLLENNFIEIHTPKLLGESSEGGANAFQ 359

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            +  NQ  F A  Q+PQ YKQ+ + SGFDR F++AP FR E+  + R   E+  LD+EM+
Sbjct: 360 INYFNQKGFLA--QSPQLYKQMCINSGFDRVFEVAPVFRAENSNTYRHLCEYVSLDVEMT 417

Query: 243 FV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT--DKPDLRNPIIM 299
           +  +  + ++  +++ + +F E S G         +        +    + P       +
Sbjct: 418 YKYDYLENVHFYDSMFKHIFTELSKGGKNEMLIKTVKGQYPCEDFQWLEETPIFTYEEAI 477

Query: 300 HNVTEHFV 307
             + +H  
Sbjct: 478 KMLIQHGK 485



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 55/151 (36%), Gaps = 26/151 (17%)

Query: 420 IAQELGIINCNCFE--FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           + +ELG I        +  I++FP             A  PF       E          
Sbjct: 502 MEKELGKIVKASHHTDYYIIINFP------------SALRPFYTMYKEDEP--------A 541

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
            +  YD    G EI SG  R     ++L+      +      N+      +F     PH 
Sbjct: 542 ISNSYDFFMRGEEILSGSQRISDVNLLLENIKRFNLDA----NKLNFYIDSFAYSSYPHS 597

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           G   G++R++ML LG  N+R+ SLFP     
Sbjct: 598 GCGIGLERVLMLFLGLNNIRKTSLFPRDPKR 628


>gi|226482506|emb|CAX73852.1| asparaginyl-tRNA synthetase [Schistosoma japonicum]
          Length = 546

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/308 (19%), Positives = 115/308 (37%), Gaps = 23/308 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +   V + GWVHR+R     ++F+ +RD  G  Q +   +    + A ++  E  + +
Sbjct: 121 TMIDQRVCVFGWVHRIRRQSKTLMFIILRDGTGFLQCIFANNLCLTQEAITLSPESTVKV 180

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V    A         G IEL A    ++  A    +      E     +   R L +
Sbjct: 181 YGVVKQLPAG----KSAPGGIELVADYWMVIGNAPAGGVDSVLTVESDIDTQLDNRHLVI 236

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +   K +   +  + + R   I   ++E   P    +  EG       +   + +F +
Sbjct: 237 RGENTAKVLRLISIALAAFRGHYIDRGYVEVLPPTFVQTQVEGGSTLFSLNYFGETAFMS 296

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
             Q+ Q Y +  +       F I   +R E  R+ R   E+  ++ E  F++ + +LN +
Sbjct: 297 --QSSQLYLETCIP-AIGDCFCITRSYRAEKSRTRRHLSEYNHVEAECPFIDFNGLLNRI 353

Query: 254 ENVLRGVFEEFSN------------GNTVSNNFLRICYDDAI---RRYGTDKPDLRNPII 298
           E+++  V +                       F R+ Y+DAI      G    DL     
Sbjct: 354 EDLVVDVCDRIVKQSGDLLLDVNPQFKPPKGPFKRLKYEDAIVQLNNLGITNEDLTPFQF 413

Query: 299 MHNVTEHF 306
             ++ E  
Sbjct: 414 GDDIPEAP 421



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 12/153 (7%)

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF--TMPQGGMES--LKGNDLLSIKA 479
           LGI N +   F +  D P      E + +D    P   T    G+++  +          
Sbjct: 401 LGITNEDLTPFQFGDDIP---EAPERRLVDTIGEPVLLTNFPAGLKAFYMLRTKGDPRLT 457

Query: 480 FQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              DL+  G  E+  G +R    + +L+ + +  I        +       + G  PHGG
Sbjct: 458 DSVDLLVPGVGELVGGSMRMDNIDDLLKGYKSEEIDPTP----YYWYTDQRKFGTCPHGG 513

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
              G +R    LLG  ++R+V L+P   + C  
Sbjct: 514 YGLGFERFCTWLLGKDHIRDVCLYPRFTSRCRP 546


>gi|169602527|ref|XP_001794685.1| hypothetical protein SNOG_04267 [Phaeosphaeria nodorum SN15]
 gi|160706191|gb|EAT88027.2| hypothetical protein SNOG_04267 [Phaeosphaeria nodorum SN15]
          Length = 857

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 136/378 (35%), Gaps = 35/378 (9%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH----YGITQVVANPDSACFEIAK 63
             +    DVG  V     +H +R      +F   R       G+    A+        A+
Sbjct: 222 IEEFSAKDVGKEVVFRARIHHLRKMSSKFVFFMFRQQLATIQGVLMEHADISKYMLYWAE 281

Query: 64  SVRSEWVLCIDGLVMSRS---AETINANIITGQIELSAQKIEI--------------LSV 106
            + +E V+ + G++        E + A I   ++ + A  +E               +S 
Sbjct: 282 HLDAETVVLVKGILQEPKAKQGEVLGATIHDVEVSVHAMHVEAAVTENLPFNVNEAEVSK 341

Query: 107 AEELPLPVFGEREYPES-------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE 159
           AE        E +   S        R   R +DLR          ++ I +  R ++ +E
Sbjct: 342 AEVDAELAKSEHKEGHSRVRISDRTRLTNRVIDLRTTASQGIFRIQSGICSLFRAQLDSE 401

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
            FIE  TP L   + E            +G+F A  Q+PQ  KQ+ +++ F + ++I   
Sbjct: 402 GFIEIHTPKLQGGATESGASVFKIDYFGRGAFLA--QSPQLAKQMAISADFGKVYEIGAV 459

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
           FR E+  + R   E+  LD+EM   E   ++L  ++   + +F+            ++  
Sbjct: 460 FRAENSNTYRHLTEYTGLDLEMQIDEHYHEVLRVLDRTFKAIFKGVYERYRPEIEIIKKH 519

Query: 279 YDDAIRRYGTDKPDLRNPIIMHNVTEH-FVHSEFRVF--SKILSVNPGYEVWAIPAKGGG 335
           +      +  + P L     +  + E  +   E +    ++ L      ++  +  +  G
Sbjct: 520 FPHEDLVWLDETPVLAFADAVKMLNESGWRDDEGKELDVNEDLGTRDEVQLGRVIKQKLG 579

Query: 336 GNRAFCDRMNEWARSQGQ 353
            +    D+    AR    
Sbjct: 580 TDYYILDKFPANARPFYA 597



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 78/198 (39%), Gaps = 35/198 (17%)

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIA--------GDPLKFCSFAADARNHIAQELG- 425
           + KH    +   +     +   D+   +         G  L         R+ +  +LG 
Sbjct: 516 IKKHFPHEDLVWLDETPVLAFADAVKMLNESGWRDDEGKELDVNEDLG-TRDEV--QLGR 572

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           +I        +I+D           K      PF            N+     +  +D+ 
Sbjct: 573 VIKQKLGTDYYILD-----------KFPANARPFYAMPD------PNNPNVTNS--FDIF 613

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
           C G EI SGG R H ++++L+    + +  + +E       + FQ G PPHGG   G++R
Sbjct: 614 CRGQEILSGGQRIHDADMLLEKMRKMKVDPQSMEE----YIQGFQWGAPPHGGGGIGLER 669

Query: 546 IVMLLLGAKNVREVSLFP 563
           I+ML++   N+R  S+FP
Sbjct: 670 ILMLMMSLGNIRHASMFP 687


>gi|226468248|emb|CAX69801.1| asparaginyl-tRNA synthetase [Schistosoma japonicum]
          Length = 495

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/308 (19%), Positives = 115/308 (37%), Gaps = 23/308 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +   V + GWVHR+R     ++F+ +RD  G  Q +   +    + A ++  E  + +
Sbjct: 70  TMIDQRVCVFGWVHRIRRQSKTLMFIILRDGTGFLQCIFANNLCLTQEAITLSPESTVKV 129

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+V    A         G IEL A    ++  A    +      E     +   R L +
Sbjct: 130 YGVVKQLPAG----KSAPGGIELVADYWMVIGNAPAGGVDSVLTVESDIDTQLDNRHLVI 185

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +   K +   +  + + R   I   ++E   P    +  EG       +   + +F +
Sbjct: 186 RGENTAKVLRLISIALAAFRGHYIDRGYVEVLPPTFVQTQVEGGSTLFSLNYFGETAFMS 245

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
             Q+ Q Y +  +       F I   +R E  R+ R   E+  ++ E  F++ + +LN +
Sbjct: 246 --QSSQLYLETCIP-AIGDCFCITRSYRAEKSRTRRHLSEYNHVEAECPFIDFNGLLNRI 302

Query: 254 ENVLRGVFEEFSN------------GNTVSNNFLRICYDDAI---RRYGTDKPDLRNPII 298
           E+++  V +                       F R+ Y+DAI      G    DL     
Sbjct: 303 EDLVVDVCDRIVKQSGDLLLDVNPQFKPPKGPFKRLKYEDAIVQLNNLGITNEDLTPFQF 362

Query: 299 MHNVTEHF 306
             ++ E  
Sbjct: 363 GDDIPEAP 370



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 12/153 (7%)

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF--TMPQGGMES--LKGNDLLSIKA 479
           LGI N +   F +  D P      E + +D    P   T    G+++  +          
Sbjct: 350 LGITNEDLTPFQFGDDIP---EAPERRLVDTIGEPVLLTNFPAGLKAFYMLRTKGDPRLT 406

Query: 480 FQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              DL+  G  E+  G +R    + +L+ + +  I        +       + G  PHGG
Sbjct: 407 DSVDLLVPGVGELVGGSMRMDNIDDLLKGYKSEEIDPTP----YYWYTDQRKFGTCPHGG 462

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
              G +R    LLG  ++R+V L+P   + C  
Sbjct: 463 YGLGFERFCTWLLGKDHLRDVCLYPRFTSRCRP 495


>gi|159114319|ref|XP_001707384.1| Lysyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157435489|gb|EDO79710.1| Lysyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 576

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 104/253 (41%), Gaps = 4/253 (1%)

Query: 15  SDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
                 V ++G +H +R  G  ++F  I       Q+ A+       +      + ++  
Sbjct: 106 EMAEEQVSVAGRIHSIRTSGAKLVFYTIHGDNDRLQIFAHVPKEDSRVKLEFDWDTIVST 165

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
                    +       +G++ +   ++ +LS      +P         + RF+ R+LD 
Sbjct: 166 LHRGDIVGVKGYPTTTKSGELSIIPVQLVLLSPCL-HMIPNSPSALTDINARFRQRYLDF 224

Query: 134 RRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   + IV+R+ IIN +R  M    N++E  TP+L       A    V    + G   
Sbjct: 225 IINNTGQKIVQRSGIINFIRRFMIDQRNYLEVETPMLQTVHGGAAAQPFVCKSNDLGHDV 284

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ + + L+  G +R F+I   FR+E       P EF  ++   ++ + +D+ + 
Sbjct: 285 YLRIAPELFLKRLVVGGLNRVFEINKNFRNESSDQTHSP-EFTMMEAYSAYDDLEDMCDL 343

Query: 253 MENVLRGVFEEFS 265
           +E ++  +   ++
Sbjct: 344 IEGLVSRLVRWYN 356



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 6/115 (5%)

Query: 459 FTMPQGGMESLKGNDLLSI--KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK- 515
           F M    + S       SI   A ++++  + FE+++     +   +  + F      K 
Sbjct: 459 FLMYHPVLMSPLAKPHRSIPELAERFEVFISCFEVSNAYTELNNPIIQRENFQAQIRDKA 518

Query: 516 ---EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                         +    G+PP GGI  GIDR+VMLL  +  +REV  FP+   
Sbjct: 519 AGDMDAMEYDEDFCKCLDYGLPPTGGIGIGIDRLVMLLTNSSTIREVIAFPLMGR 573


>gi|255948264|ref|XP_002564899.1| Pc22g08870 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591916|emb|CAP98175.1| Pc22g08870 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 577

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 67/346 (19%), Positives = 124/346 (35%), Gaps = 28/346 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             + G+ VR+ G VHR R    ++F+ + D YG  Q V   D        ++  E  + I
Sbjct: 148 SDEAGTRVRVLGRVHRARAQKDVVFITLTDGYGYLQCVLTGDMVKTYDIMTLTLETSMSI 207

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFL 131
            G + +   +    N      EL A   EI+  A  ++  +      +      +  R L
Sbjct: 208 HGEMRAVPPKQHAPNDR----ELHADFFEIIGKAAGDKEAITTRVAPDADPQTLYDNRHL 263

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR +T    +  R   + + R        +E + P +  +  EG           + ++
Sbjct: 264 VLRGETSSSVMKVRAATLRAFRKAFEETRMLEVTPPAMVQTQVEGGSTLFGFDYYGENAY 323

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  + S     + + P FR E   + R   E+  ++ E+ F+   D+L+
Sbjct: 324 --LTQSSQLYLETCLPS-LGDVYCVCPSFRAEKSLTRRHLSEYTHIEAELDFITFTDLLD 380

Query: 252 TMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
            +E+V+  V +                 +    S  F R+ YDDAI+     +       
Sbjct: 381 HLEDVICRVIDYTLAEPEIAGYIKQLNPDFKPPSRPFRRMKYDDAIQWLIEHEIPNEEGQ 440

Query: 298 ---IMHNVTEHFVHSEFRVFSKI--LSVNPGYEVWAIPAKGGGGNR 338
                 ++ E        + ++   L+  P         K     R
Sbjct: 441 PHKFGDDIAEAAERRMTDIINQPIFLTHFPANIKAFYMKKAPEDRR 486



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+    EI  G +R    + ++ A+ + G+        +       + G  PHGG   G+
Sbjct: 494 LMPGVGEIVGGSMRMDDWDELMAAYKHEGMDPSP----YYWYTDQRKYGTSPHGGYGLGL 549

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R +  L     VR+ SL+P     C  
Sbjct: 550 ERFLAWLCARYTVRDCSLYPRFTGRCTP 577


>gi|291525649|emb|CBK91236.1| aspartyl-tRNA synthetase, archaeal type [Eubacterium rectale DSM
           17629]
          Length = 443

 Score =  156 bits (394), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 75/307 (24%), Positives = 114/307 (37%), Gaps = 19/307 (6%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L     G  +++ G +H +R  G + F+ +R   G+ Q V  P  + F +   ++    +
Sbjct: 19  LAGDYEGKNIKVKGAIHTIRDMGEVAFIVLRRRDGLVQCVYEPGKSQFSV-DDLKEADTV 77

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSV-AEELPLP-VFGEREYPESIRFKYR 129
            + G   S               EL    I ILS  AE +PL     +       +   R
Sbjct: 78  EVCGTYKSDDRSLN-------GFELRLDTIIILSEPAEPMPLQINKWKLNTSLEAKLNNR 130

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            + LR          +  I    R  +    F E  TP L A S EG  +       ++ 
Sbjct: 131 AVALRNPRERATFRIQEGITRGFRDFLYNNGFTEIHTPKLGAKSAEGGANLFKLEYFHRP 190

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDD 248
           +   L Q+PQ YKQ +M   FDR F+ AP FR E   + R   E+  LD EM +++  +D
Sbjct: 191 AI--LQQSPQFYKQ-MMVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFED 247

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I+      L+   E            L+I   D      T  P +R       V E +  
Sbjct: 248 IMEMETGFLQYTMELLKTSYAKELELLKIKLPDV-----TSIPRVRFDEAKQRVAEKYNR 302

Query: 309 SEFRVFS 315
                F 
Sbjct: 303 QFRNPFD 309



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF            +         +DL+  G EI 
Sbjct: 329 DFVFVTHYP------------SKKRPFYAM--------DDPADETYTLSFDLLFRGLEIT 368

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H    +++  +  G+  E +E+       AF+ GMPPHGG+  G++R+ M L+G
Sbjct: 369 TGGQRIHDYNKLMEKIAKRGMETEGMES----YLSAFKHGMPPHGGLGIGLERLTMQLIG 424

Query: 553 AKNVREVSLFPMSQNFCDL 571
             NVRE +LFP   +  + 
Sbjct: 425 EDNVREATLFPRDLSRLEP 443


>gi|326331872|ref|ZP_08198159.1| lysine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325950369|gb|EGD42422.1| lysine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 505

 Score =  155 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 110/272 (40%), Gaps = 21/272 (7%)

Query: 5   RTHSCGDLGVS-----DVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           RTH+  ++  +     + G      V ++G V  VR  G + F  +++  G         
Sbjct: 46  RTHTLAEVREAYEDKLEAGEETQDVVTVAGRVMFVRNTGKLAFATLQEGVGT---RLQVM 102

Query: 56  SACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +  E+ +   +EW   +D G  ++ +   I++    G++ + A   ++ + A      +
Sbjct: 103 LSLAEVGEEALAEWKSLVDLGDHVAVTGRVISSR--RGELSIMASSWQMAAKALRPLPVL 160

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASS 173
              +E  E  R + R+ DL      +++V+ R +I  ++R  +  + ++E  TP+L    
Sbjct: 161 --HKELSEESRVRQRYADLIVRQEARDMVRTRAKITQAIRRCLEDDGYLEVETPVLQLIH 218

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F             L  A +   +  +  G D+ ++I   FR+E   S   P 
Sbjct: 219 GGAHARPFNTHMNAFD-QPMTLRIALELNLKKAVVGGIDKVYEIGRIFRNEGVDSTHSP- 276

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           EF  ++   ++ +Q  I   +  +     +  
Sbjct: 277 EFTMIEAYQAYGDQFTIAEQIRRMYLAAADAV 308



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----S 514
           F      +  +   +   + A  +DL+  G E  +G        V  +  +   +     
Sbjct: 394 FPAIAQPLARINDEEPGKVLA--WDLIIGGVERGTGFTELIDPVVQREVLTAQSLLAAGG 451

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                       RA + G PP GG+  G+DR +ML  GA  +RE  LFP
Sbjct: 452 DPEAMQLDEDFLRALEYGAPPMGGLGLGLDRAIMLFTGAG-IRETILFP 499


>gi|225405476|ref|ZP_03760665.1| hypothetical protein CLOSTASPAR_04696 [Clostridium asparagiforme
           DSM 15981]
 gi|225042998|gb|EEG53244.1| hypothetical protein CLOSTASPAR_04696 [Clostridium asparagiforme
           DSM 15981]
          Length = 485

 Score =  155 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 14/247 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  VR++G +H +R  G + F+ +R   G+ Q V       F+I + ++ E  + + G V
Sbjct: 67  GREVRVNGAIHTIRSMGEVAFVVLRKAGGLVQCVYEEGLTNFDI-RDLKEESAVEVTGTV 125

Query: 78  MSRSAETINANIITGQIELSAQKIEILSV--AEELPLPVFGEREYPESIRFKYRFLDLRR 135
                         G  E+  +++ +LS   A         +       +   R + LR 
Sbjct: 126 KREER-------APGGFEIRLKELRVLSKPAAPLPIAVSKWKLNTSLETKLALRPVSLRN 178

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
                    +  I+   R  ++ + F E  TP + A   EG  +        + +   L 
Sbjct: 179 LRERAKFKIQEGIVRGFRDYLLGQGFTEIRTPKIVARGAEGGSNVFKLDYFGKKAE--LG 236

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTME 254
           Q+PQ YKQ  M   +DR F+ AP FR E   + R   E+  LD EM +++  +DI++   
Sbjct: 237 QSPQFYKQ-TMVGVYDRVFEAAPVFRAEKHNTTRHLNEYTSLDFEMGYIDGFEDIMDMET 295

Query: 255 NVLRGVF 261
            +L+ V 
Sbjct: 296 GMLQFVM 302



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF             D     +  +DL+  G E+ 
Sbjct: 371 DFVFVTHYP------------SKKRPFYAMDD------PADPKYTLS--FDLLFKGLEVT 410

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H    +L+     G+  E + +        F+ GMPPHGG+  G++R+ M LL 
Sbjct: 411 TGGQRIHDYGEILRKMEKRGMDPEDIAS----YLMIFKYGMPPHGGLGIGLERLTMRLLD 466

Query: 553 AKNVREVSLFPMSQNFCDL 571
            +NVRE +LFP      + 
Sbjct: 467 EQNVRETALFPRDVTRLEP 485


>gi|58265840|ref|XP_570076.1| aspartate-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134110272|ref|XP_776192.1| hypothetical protein CNBD0130 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258862|gb|EAL21545.1| hypothetical protein CNBD0130 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226309|gb|AAW42769.1| aspartate-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 567

 Score =  155 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 69/278 (24%), Positives = 118/278 (42%), Gaps = 30/278 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHY----GITQVVANPDSA-----CFE 60
           +L    VG  V     +H +RP G  I+FL  R       G+  V    D         +
Sbjct: 102 ELNKDLVGQRVIFRARLHNMRPQGAKIVFLTFRQQTHTLQGVLVVSKESDEHQVSKQMLK 161

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSA--QKIEI----LSVAEELPLPV 114
            A  + SE ++ ++G+V    AE  +  I   ++ +      +E+     S+ +      
Sbjct: 162 YATLIPSEAIVLVEGVVKE--AEVKSCTIQNYEVGIQKIFTAVEVNELPFSIDDAARPES 219

Query: 115 FGEREYPESI---------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
             +R   E +         R   R +DLR  T       ++ I    R  + +E FIE  
Sbjct: 220 DFQRMETEDVQFARVALPTRLDNRVMDLRTPTNQAIFRIQSAICQLFREYLNSEGFIEIH 279

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           +P L  ++ E           ++ +F A  Q+PQ  KQ+ +A   +R ++IAP FR ED 
Sbjct: 280 SPKLQGAATESGASVFKVKYFDREAFLA--QSPQLAKQMAIAGDMERVYEIAPVFRAEDS 337

Query: 226 RSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
            + R   EF  LD+EM+  E   + ++ ++N+L  +F 
Sbjct: 338 NTHRHMTEFMGLDLEMAIEEHYHEAVDVLDNMLLHIFR 375



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 52/122 (42%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF TMP     +L         +  YD    G EI SG  R H    +++   
Sbjct: 459 KFPIAIRPFYTMPDPSDPTL---------SNSYDFFMRGEEILSGAQRIHDPTFLVERMK 509

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           +VGI    +     G   AF+ G PPH G   G++R+VML L   N+R  SLFP      
Sbjct: 510 DVGIDPASM----AGYLDAFKLGAPPHAGGGIGLERVVMLFLKLGNIRRASLFPRDPKRL 565

Query: 570 DL 571
             
Sbjct: 566 AP 567


>gi|197302918|ref|ZP_03167969.1| hypothetical protein RUMLAC_01646 [Ruminococcus lactaris ATCC
           29176]
 gi|197297999|gb|EDY32548.1| hypothetical protein RUMLAC_01646 [Ruminococcus lactaris ATCC
           29176]
          Length = 452

 Score =  155 bits (393), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 78/302 (25%), Positives = 127/302 (42%), Gaps = 19/302 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G+ VR++G +H +R  G + F+ +R   G+ Q V     + F + K V+    + + G 
Sbjct: 33  IGTEVRVNGAIHTIRDMGTVAFIILRKREGLVQCVYEEGVSKFNL-KDVKEADTVEVSG- 90

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSV-AEELPLPV-FGEREYPESIRFKYRFLDLR 134
           ++ RS +  N       IE+   +++ILS  AE +PLP+   +       +  YR + LR
Sbjct: 91  MLERSEKAPNG------IEIRLGELKILSEPAEPMPLPISKWKLNTSLEAKLNYRPISLR 144

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
                     +  I+   R  +  E F E  TP + A S EG  +       ++ +   L
Sbjct: 145 NIRERAKFRIQEGIVRGFRDFLYQEGFTEIHTPKIGAKSAEGGANLFRLEYFHRPAI--L 202

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTM 253
            Q+PQ YKQ +M   FDR F+ AP FR E   + R   E+  LD EM +++  +DI+   
Sbjct: 203 QQSPQFYKQ-MMVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFEDIMAME 261

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
              L+                L I           + P +R   I   V E +       
Sbjct: 262 TGFLQYTMTLLEKEYARELKILNIQVPKT-----KEIPAVRFDEIKKLVAEKYDRKIKNP 316

Query: 314 FS 315
           F 
Sbjct: 317 FD 318



 Score = 97.1 bits (240), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF            +         +DL+  G EI 
Sbjct: 338 DFVFVTHYP------------SKKRPFYAM--------DDPADPTYTLSFDLLFRGMEIT 377

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H    +L      G++ E +E        AF+ GMPPHGG+  G++R+ M ++ 
Sbjct: 378 TGGQRIHDYHELLAKMEKRGMTDEGMEQ----YLSAFKHGMPPHGGLGIGMERLTMKMMN 433

Query: 553 AKNVREVSLFPMSQNFCDL 571
             NVRE +LFP   +  + 
Sbjct: 434 EDNVRETTLFPRDLSRLEP 452


>gi|256078425|ref|XP_002575496.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238660736|emb|CAZ31729.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 512

 Score =  155 bits (393), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 63/314 (20%), Positives = 120/314 (38%), Gaps = 35/314 (11%)

Query: 19  SFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
             V + GWVHR+R     ++F+ +RD  G  Q V + +    + A ++  E  + + G+V
Sbjct: 122 QRVCVYGWVHRIRRQSKTLMFIILRDGTGFLQCVFSNNLCLTQDAITLSPESTVEVYGVV 181

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
               +         G IEL A    I+  A    +      E     +   R L +R + 
Sbjct: 182 KQLPSG----KSAPGGIELVADGWAIIGKAPAGGIDSVLTVESDIDTQLDNRHLVIRGEN 237

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
             K +   +  + + R   +   ++E   P    +  EG+      +   + +F +  Q+
Sbjct: 238 TAKVLRLVSVALEAFRAHFVDRGYVEVLPPTFVQTQVEGSATLFSLNYFGETAFMS--QS 295

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  + +  D  F I   +R E  R+ R   E+  ++ E  F++ + +L  +E+++
Sbjct: 296 SQLYLETCIPAVGD-CFCITRSYRAEKSRTRRHLSEYNHVEAECPFIDLNGLLERIEDLV 354

Query: 258 RGVFEEFSN------------GNTVSNNFLRICYDDAIRR---------------YGTDK 290
             V +                  T    F R+ Y+DAI                 YG D 
Sbjct: 355 VDVCDRIMKRSGDLLLDVNPQFKTPKRPFKRLKYEDAIVCLNNLGITKEDLTPFQYGDDI 414

Query: 291 PDLRNPIIMHNVTE 304
           P+     ++  + E
Sbjct: 415 PEAPERRLVDTIGE 428


>gi|239625351|ref|ZP_04668382.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519581|gb|EEQ59447.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 455

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 66/268 (24%), Positives = 115/268 (42%), Gaps = 14/268 (5%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           +  +  G  VR++G VH +R  G + F+ +R   G+ Q V    +   +I K ++ E  +
Sbjct: 31  ISGNHEGRTVRMNGTVHTIRHMGEVAFVILRKAEGLVQCVCEGAAGDVDI-KDLKEECAV 89

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLP-VFGEREYPESIRFKYR 129
            + G V                 E+  + I ILS  A+ +P+P    +       +   R
Sbjct: 90  EVKGAVRKEER-------APHGFEIRLEDIRILSRPADTMPIPVNKWKLNTSLETKLALR 142

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            + LR          +  I+   R  + ++ F E  TP + A   EG  +       N+ 
Sbjct: 143 PISLRNIRERAKFKIQEGIVRGFRDYLFSQGFTEIHTPKIVARGAEGGSNVFKLDYFNKK 202

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDD 248
           +   L Q+PQ YKQ  M   +DR F+ AP FR E   + R   E+  LD+EM +++  +D
Sbjct: 203 AE--LGQSPQFYKQ-TMVGVYDRVFETAPVFRAEKHNTTRHLNEYTSLDLEMGYIDGFED 259

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           +++    +L+ V E          + L+
Sbjct: 260 VMDMETGMLQYVMELLRKEYGKELDILK 287



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF            +   S     +DL+  G E+ 
Sbjct: 341 DFVFVTHYP------------SKKRPFYAM--------DDPEDSRFTLSFDLLFKGLEVT 380

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H    +L+      +  + +E+        F+ GMPPHGG+  G++R+ M LL 
Sbjct: 381 TGGQRIHDYHAILEKMGKRDMDPKDIES----YLMIFKYGMPPHGGLGIGLERLTMRLLD 436

Query: 553 AKNVREVSLFPMSQNFCDL 571
            +NVRE  +FP      + 
Sbjct: 437 EQNVRETCMFPRDVTRLEP 455


>gi|293977881|ref|YP_003543311.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN]
 gi|292667812|gb|ADE35447.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN]
          Length = 453

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/285 (20%), Positives = 100/285 (35%), Gaps = 18/285 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             + + GWV   R +    F+ I D   I  +    D   +     +     L + G+V+
Sbjct: 21  KKISIKGWVKHFRSN---CFIIISDGSTIKNIQIYVDKHNYSFLNKINIGVSLEVIGVVV 77

Query: 79  SRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
               +          IE+ A KI+I      E+L   +   +E+      +  +L  R  
Sbjct: 78  FSKGKKQI-------IEIYANKIKIYGSFNPEDLQNTILQPKEHSFKKLREQAYLRFRTT 130

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF----- 191
                +  R  I  S+      + F   +TPI+T    EGA D    +   + +      
Sbjct: 131 IFSSIMRIRHNISFSIHKFFYKKKFYYINTPIITTYDTEGAGDMFRVTNFKKNNNLDFFG 190

Query: 192 -YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y       Q +    ASG  + +   P FR E   + R   EF+ ++ E+SF E ++I+
Sbjct: 191 AYTYLTVSGQLQGEAAASGLGKIYTFGPTFRAEKSNTFRHLSEFWMIEPEISFYELNNIM 250

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           +  E  L+ + +           FL    +     Y         
Sbjct: 251 SLAEEFLKFIIKYVIKHCYEDLYFLEKKKNIFKILYSILDFPFEK 295



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 14/117 (11%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSN 510
                 PF M          ND  ++ A   D++     EI  G  R     V+L+    
Sbjct: 346 YPLKIKPFYMR-------LNNDNKTVAAM--DIIFPYIGEIIGGSQREERYNVLLKRMIE 396

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +  + +           + G  PH G   G +R++  +    N+++V  FP  QN
Sbjct: 397 SNLDTKSLW----WYLNIRRFGSVPHSGFGLGFERLIQFITNISNIKDVIPFPRYQN 449


>gi|253743723|gb|EET00046.1| Lysyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 576

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 103/253 (40%), Gaps = 4/253 (1%)

Query: 15  SDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
                 V ++G +H +R  G  ++F  I       Q+ A+       I      + V+  
Sbjct: 106 EMAEEQVSVAGRIHSIRTSGAKLVFYTIHGDNDRLQIFAHIPKDTSPIKLEFDWDIVIPT 165

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
                            +G++ +   ++ +LS      +P         + RF+ R+LD 
Sbjct: 166 LHRGDIVGVRGYPTTTKSGELSIIPVQLVLLSPCL-HMIPNSPTALTDLNTRFRQRYLDF 224

Query: 134 RRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   + IV+R+ IIN +R  M     ++E  TP+L       A    V    + G   
Sbjct: 225 IINNTGQKIVQRSGIINFIRRFMIDQRKYLEVETPMLQTIHGGAAAQPFVCKSNDLGHDV 284

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ + + L+  G +R F+I   FR+E       P EF  ++   ++ + +D+ + 
Sbjct: 285 YLRIAPELFLKRLVVGGLNRVFEINKNFRNESSDQTHSP-EFTMMEAYSAYDDLEDMCDL 343

Query: 253 MENVLRGVFEEFS 265
           +E+++  +   ++
Sbjct: 344 IEDLVSKLVRWYN 356



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 6/115 (5%)

Query: 459 FTMPQGGMESLKGNDLLSI--KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F M    + S       SI   A ++++  + FEI++     +   V  + F      K 
Sbjct: 459 FLMYHPVLMSPLAKPHRSIPELAERFEVFISCFEISNAYTELNNPIVQRENFQAQVRDKA 518

Query: 517 ----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                         +    G+PP GGI  GIDR+VMLL  +  +REV  FP+   
Sbjct: 519 AGDVEAMEYDEDFCKCLDYGLPPTGGIGVGIDRLVMLLTNSSTIREVIAFPLMGR 573


>gi|296128502|ref|YP_003635752.1| lysyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296020317|gb|ADG73553.1| lysyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 495

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 109/265 (41%), Gaps = 18/265 (6%)

Query: 5   RTHSCGDLGVS----DVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTH+  ++  +    + G+     V ++G V  +R  G + F  ++D  G        + 
Sbjct: 32  RTHTIAEVRAAYPELEPGAETQDVVGVAGRVVFLRNTGKLAFATLQDGAGTRLQAMLSEK 91

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
              E+       +   +D G  +      I +    G++ + A +  + + A      ++
Sbjct: 92  ---EVGADALGSFKAAVDLGDHVFVHGRVIASR--RGELSVMADEWRMAAKAIRPLPNLY 146

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
              E  E  R + R++DL      +++V+ R+ ++ S+R       ++E  TP+L     
Sbjct: 147 EGTEMSEEARVRQRYVDLIVRPGARDMVRLRSAVVRSVRENFWRRGYLELETPMLQVRPE 206

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F           Y L  AP+ + +     G ++ F+I   FR+E   S   P E
Sbjct: 207 GAAARQFETHMNAFDIDLY-LRIAPELFLKRAAVGGVEKVFEINRNFRNEGVDSTHSP-E 264

Query: 234 FYQLDMEMSFVEQDDILNTMENVLR 258
           F  L+   ++ + D +    +++++
Sbjct: 265 FAMLEAYEAYGDYDTMAALTQDLVQ 289



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 48/136 (35%), Gaps = 26/136 (19%)

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
           +   ++ DFP               +P T         + +        ++DL   G E+
Sbjct: 376 WAPTFVRDFP------------VETSPLT---------RDHRTEKGLVEKWDLYVRGMEL 414

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIV 547
           A+         V  + F    +     ++           A +  MPP GG+  GIDR++
Sbjct: 415 ATAYSELVDPVVQRERFEAQAVLAAKGDDEAMRIDEDFLAAMEHAMPPSGGMGMGIDRLL 474

Query: 548 MLLLGAKNVREVSLFP 563
           + + G   +R+   FP
Sbjct: 475 IAMTGQG-IRDTIAFP 489


>gi|296139451|ref|YP_003646694.1| lysyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296027585|gb|ADG78355.1| lysyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 1120

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 77/356 (21%), Positives = 130/356 (36%), Gaps = 33/356 (9%)

Query: 5   RTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RT S  ++     G        + V ++G V  VR +GG+ F+D+ +     QV+A    
Sbjct: 656 RTASLAEVRGHLNGLAPDSSTDTVVSVTGRVRGVRDYGGVTFVDLHEDRATLQVIAERGR 715

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                   VR+ W   ID G ++S + E + ++  TG++ +  Q   +            
Sbjct: 716 TP----DDVRAFWRESIDMGDLVSVTGEMVTSH--TGELSVLLQDWAMAGKCLSPVP--K 767

Query: 116 GEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
                 +  R + R LDL  D      + +R+R + +MR       F E  TP+L +   
Sbjct: 768 PRVRLGDETRARSRSLDLMTDDGAVDLLYRRSRAVAAMRAAFTDRGFTEVETPMLQSVHG 827

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F           Y L  AP+ Y + L   G  R F+I   FR+E   +   P E
Sbjct: 828 GAAARPFTTHINAYDMDLY-LRIAPELYLKRLAVGGMGRIFEINRNFRNEGADATHNP-E 885

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  L+   ++ +   +      V+ G     +                     GT + DL
Sbjct: 886 FTSLEAYEAYGDYTTMRTLTREVILGAAIAVNGRPIAV---------RPDGSGGTREVDL 936

Query: 294 --RNPII-MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
               P+I +H      V +     S++  +    + W + A  G         + E
Sbjct: 937 TAEWPVITVHEAVSRAVGTSVTPDSEVEELEALCKQWHVAAPRGASAGKLVMELYE 992



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 49/157 (31%), Gaps = 28/157 (17%)

Query: 411  SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
            + A      + +  G++        +  DFP      E   +   H              
Sbjct: 981  ASAGKLVMELYE--GLVEKQTEFPTFYCDFPI-----EVSPLARRHR------------- 1020

Query: 471  GNDLLSIKAFQYDLVCNGFEIASGGIRNHMS----EVMLQAFSNVGISKEVVENRFGGLY 526
              D       Q+DLV  G E+ +            E + Q                    
Sbjct: 1021 -RDPR--LTEQWDLVGFGAELGTAYTELTDPIDQRERLTQQSMAAAAGDPEAMELDESFL 1077

Query: 527  RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A    MPP GG+  G+DRI+MLL G  N+R    FP
Sbjct: 1078 DALSYAMPPTGGLGIGVDRIIMLLAGV-NIRATLAFP 1113


>gi|15829242|ref|NP_326602.1| asparaginyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|20139911|sp|Q98PF2|SYN_MYCPU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|14090186|emb|CAC13944.1| ASPARAGINYL-TRNA SYNTHETASE (ASPARAGINE--TRNA LIGASE) (ASNRS)
           [Mycoplasma pulmonis]
          Length = 450

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 66/419 (15%), Positives = 141/419 (33%), Gaps = 24/419 (5%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           +  +L  S     +++ GWV   R +  I F+++ D   +  +     S      + +  
Sbjct: 11  NAKELDKS----KIKIKGWVVTSRGNKKIQFIELNDGSSVLHLQLVLKS------EKMDL 60

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             +    G  +               +EL   KI +L+ ++E        ++        
Sbjct: 61  NDIHFKTGSSIKAEGILNYTPKAEQSVELIVDKISLLAQSDEDFPIQT--KKTTLEFLRT 118

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
              L  R +T+   ++ R+ I   +       +F   + PI+T++  EGA +  +    +
Sbjct: 119 IPHLRHRSNTIKAVMLVRSSISFFIHEYFQKNDFSLVAAPIITSNDGEGAGETFIVDSED 178

Query: 188 QGSFY-----ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           +  F+     A      Q      A G  + +  AP FR E+  + +   EF+ ++ E++
Sbjct: 179 KEPFFGNNVKATLGVTGQLHAEAYALGLQKVYTFAPTFRAENSNTKKHAAEFWMVEPEVA 238

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-------PDLRN 295
           F    +++   E +L+ V ++          FL       + +   D         + R 
Sbjct: 239 FFTLKELIQMSEEMLKYVIKKVLEKRRDELVFLDTHIKPGLIQSLEDFLESNLEIIEYRK 298

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
            I +    + F   +   F   L       +    AKG  G   +  ++  +   Q    
Sbjct: 299 VIEILEKNKVFFEEQNIEFGMDLKTEHERFIAEKYAKGPVGVINYPKKLKAFYMYQNDDN 358

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
                + L   G    +G   +       E     L++   D  +++      +   A 
Sbjct: 359 ETVAAFDLLVPGIGELVGGSQRENRYEKLEQRIQELNIDQKDIQWYLDLRKYGYSGSAG 417



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 14/111 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M Q                  +DL+  G  E+  G  R +  E + Q    + I ++
Sbjct: 349 AFYMYQNDDNETVA---------AFDLLVPGIGELVGGSQRENRYEKLEQRIQELNIDQK 399

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            ++          + G     G   G++R+VM + G  N+R+   FP + N
Sbjct: 400 DIQ----WYLDLRKYGYSGSAGFGLGLERLVMYITGIDNIRDSIPFPRTPN 446


>gi|323357518|ref|YP_004223914.1| lysyl-tRNA synthetase (class II) [Microbacterium testaceum StLB037]
 gi|323273889|dbj|BAJ74034.1| lysyl-tRNA synthetase (class II) [Microbacterium testaceum StLB037]
          Length = 506

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 130/342 (38%), Gaps = 23/342 (6%)

Query: 10  GDLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAKSVRS 67
           GDL   ++ G    ++G V   R  G + F  ++   G   Q + +  +   E  ++ + 
Sbjct: 61  GDLEAGAETGVTAGVAGRVVFSRNTGKLCFASLQAGDGSRIQAMVSLAAVGEESLQAWKE 120

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
              L   G  +  S E I++    G++ +   +  +   A+ +        E  E  R +
Sbjct: 121 ---LVDLGDHVFVSGEVISSR--RGELSIMVAEWRV--AAKAVLPLPNLHSELSEESRVR 173

Query: 128 YRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSR 185
            RFLDL  RD   + ++ R ++  S+R      +F+E  TP+L        AR F+  S 
Sbjct: 174 SRFLDLIVRDRARETVLARAKVNASLRRTFTERDFVEVETPMLQVQHGGASARPFVTHSN 233

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 Y L  AP+ + +  +  G DR ++I   FR+E   S   P EF  L+   ++ +
Sbjct: 234 AFDAELY-LRIAPELFLKRAVVGGIDRVYEINRNFRNEGADSTHSP-EFAMLEAYQAYTD 291

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            + I +  + +++      +   TV+        D      G D   +   + +   +  
Sbjct: 292 YNGIADLTQTLIQNAAVAVAGSTTVTW------ADGTEYDLGGDWDRISMYVSLSEAS-- 343

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
                    + +  +        + A     +  + + + E 
Sbjct: 344 --GRTITPQTAVDELRAFGAEAGVEAPAHETHGKWVEELWEH 383



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 50/135 (37%), Gaps = 26/135 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++MDFP      +   +   H                  +     ++DL   GFE+A
Sbjct: 391 RPTFVMDFPV-----DTSPLVREHR----------------SIPGVVEKWDLYVRGFELA 429

Query: 493 SGGIRNHMSEVMLQAFSNVG----ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G        +  + F               +      RA + GMPP GG+  GIDR++M
Sbjct: 430 TGYSELVDPVIQRERFVEQATLAARGDVEAMSIDEEFLRALEHGMPPTGGMGMGIDRLLM 489

Query: 549 LLLGAKNVREVSLFP 563
            + G   +RE  LFP
Sbjct: 490 AITGLG-IRETILFP 503


>gi|308175903|ref|YP_003915309.1| lysine-tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307743366|emb|CBT74338.1| lysine-tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 504

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/293 (20%), Positives = 115/293 (39%), Gaps = 18/293 (6%)

Query: 5   RTHSCGDLGVS----DVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQ-VVANPD 55
           RTHS   +       + G      V + G +  +R  G + F  +++     + V     
Sbjct: 41  RTHSLQAIRDKYEHLEAGEETEDVVGVVGRIVFMRNTGKLCFATLQEGGKKGEGVRLQVM 100

Query: 56  SACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   + +   ++W   +D G  +  + + I++    G++ + A   E+ S A      +
Sbjct: 101 LSLANVGEERLAQWKSLVDLGDHVFVTGKVISSR--RGELSIMADAWEMASKALRPLPVL 158

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-AS 172
               +  E  R + R+ DL  R+   + + KR  II ++R  +   +++E  TP+L    
Sbjct: 159 --HADLNEETRVRQRYADLIVRNEAREMVYKRAAIIRAVRNTLEGHDYVEVETPMLQLVH 216

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F             +  A + Y +  +  G DR F+I   FR+E   S   P 
Sbjct: 217 GGASARPFKTHLNAFDQEM-TMRIALELYLKRAVVGGVDRVFEIGRIFRNEGVDSTHSP- 274

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           EF  L+   ++ +Q  +   M+ ++    +    G T+      I  D   R 
Sbjct: 275 EFTMLECYEAYADQYVMAQRMQQMILNAADAIGAGRTIETANGTINLDGEWRW 327



 Score = 84.0 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 5/93 (5%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQ 530
                  +DL+  G E  +         +  +  +   +                 RA +
Sbjct: 407 KPGVIEAWDLIIGGMERGTAFSELIDPVIQRERLTEQSLLAAGGDPEAMQLDEDFLRALE 466

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G PP GGI  GIDR+VML   A  +RE  LFP
Sbjct: 467 YGAPPMGGIGLGIDRLVMLFSNAG-IRETILFP 498


>gi|269218271|ref|ZP_06162125.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269212399|gb|EEZ78739.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 515

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 99/255 (38%), Gaps = 13/255 (5%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           + GV      V ++G V   R  G I F  ++D  G    V    +   E A +     V
Sbjct: 61  EAGVELADVAVGIAGRVMLSRSSGKIAFATLQDGPGNRIQVLLSLANVGEEAFARFKADV 120

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-----YPESIR 125
              D L +    E        G++ + A+   I S A      V+   +       E  R
Sbjct: 121 DLGDHLFV----EGYIGTSKRGELSVFARSWRIASKAIRPLPKVYTNADGEDVTLSEESR 176

Query: 126 FKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVP 183
            + R LDL      +++V+ R  +  S+R       ++E  TP+L T      AR F+  
Sbjct: 177 VRMRHLDLIMRPAARDMVRLRAGVTKSLRANFDDRGYLELETPMLQTIHGGAAARPFITH 236

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                   Y L  A + Y +  +  G D+ F+I   FR+E   S   P EF  ++   ++
Sbjct: 237 INAYNQDLY-LRIATELYLKRAVVGGVDKVFEINRNFRNEGADSSHSP-EFTAIEAYEAY 294

Query: 244 VEQDDILNTMENVLR 258
              D +    +++++
Sbjct: 295 ATYDTMAELTQSLVQ 309



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 51/157 (32%), Gaps = 28/157 (17%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             A      I +EL  +    +E  +++DFP     E+   +   H              
Sbjct: 376 WVAGKIAEEIFEEL--VGSKLWEPSFVLDFP-----EDTSPLTRPHR------------- 415

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLY 526
                     ++DL   G E+A+         +  +      +                 
Sbjct: 416 ---SKPGLTEKWDLYVRGIELATAYSELADPVIQRERLVAQSLEAANGDPEAMQLDEEFI 472

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + G PP GG+  G+DR++  + G   +RE   FP
Sbjct: 473 EALEQGFPPCGGMGMGVDRLLTAMTGLG-IRETITFP 508


>gi|297738713|emb|CBI27958.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/298 (17%), Positives = 102/298 (34%), Gaps = 42/298 (14%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G    G  V++ GWV   R  G     FL++ D      +    D+A   + + V++   
Sbjct: 46  GAGLAGQTVKVGGWVKTGREQGKGSFAFLELNDGSCPANLQVIVDAAVAPLGQLVQTGTC 105

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++GL+      T        ++EL  +K+  +   +    P+   R   E +R  +  
Sbjct: 106 VHVEGLLKVPPEGTK------QRVELRVEKVHHVGPVDPAKYPLPKTRLTLEFLR-DFVH 158

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV---- 186
              R +T+      R  +  +         F+   TPI+T S  EGA +    + +    
Sbjct: 159 FRPRTNTISAVARIRNALAYATHTFFQNHGFLYIHTPIITTSDCEGAGEMFQVTTLISDA 218

Query: 187 --------------------------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIA 217
                                         F+   A      Q +    A      +   
Sbjct: 219 EKENLSRLEERSKLKPGIPQKDGKIDYSQDFFARQAFLTVSGQLQVETYACAVSSVYTFG 278

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           P FR E   + R   EF+ ++ E++F +  D +N  E  ++ + +   +       F+
Sbjct: 279 PTFRAEHSHTSRHLAEFWMVEPEIAFADLKDDMNCAEAYVKFLCQWLLDNCIDDMEFM 336



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    E+  G  R    EV+ +    +G+  E  E          + G   H G   G 
Sbjct: 434 LVPKVGELIGGSQREERYEVIEKRILEMGLPLEPYE----WYLDLRRYGTVKHCGFGLGF 489

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R+++   G  N+R+V  FP      DL
Sbjct: 490 ERMILFATGIDNIRDVIPFPRYPGRADL 517


>gi|85086144|ref|XP_957635.1| lysyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|28918729|gb|EAA28399.1| lysyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|29150133|emb|CAD79693.1| probable lysine-tRNA ligase [Neurospora crassa]
          Length = 618

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 109/262 (41%), Gaps = 17/262 (6%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIR---DHYGI--------TQVVANPDSACFEIAK-SV 65
             +R++G ++ +R  G  +IF DIR   D   I           +A      FE     +
Sbjct: 127 KELRIAGRIYNIRTAGSKLIFYDIRTSADTKSIGTRMQVVCQAQLAKEGGVPFEKQHAHL 186

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           R   ++ I G     + + +      G++ + A ++++LS      LP           R
Sbjct: 187 RRGDIIGIVGFPGRTNPKNLK-EGEQGELSVFATEVQLLSPCL-HMLPSVRYPFADAEQR 244

Query: 126 FKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
            + R+LD L  D   + + +R+R++  +R       FIE  TP++ A +        V  
Sbjct: 245 ARMRYLDMLWNDRSRETLWQRSRMVRYIRDFFHERRFIEVETPMMHAIAGGATALPFVTH 304

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             +      +  AP+ + + ++   F + F++   FR+E       P EF  ++   ++ 
Sbjct: 305 HNDLDMDMFMRVAPELFLKKMIVGQFGKVFEMGKNFRNEGIDLTHNP-EFTSIEFYWAYA 363

Query: 245 EQDDILNTMENVLRGVFEEFSN 266
           +  D+++  E ++  + +E + 
Sbjct: 364 DVYDLMSITEELVSSLVKELTG 385



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 4/93 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
            +    +++      EIA+     +        F      K+  ++           A +
Sbjct: 495 KNGLCERFEAFVCKKEIANAYTELNNPFDQRLRFEEQARQKDQGDDEAQLVDESFLNALE 554

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            G+PP GG   GIDR+ M L    ++REV  FP
Sbjct: 555 YGLPPTGGWGLGIDRLAMFLTDNYSIREVLAFP 587


>gi|302816978|ref|XP_002990166.1| hypothetical protein SELMODRAFT_272117 [Selaginella moellendorffii]
 gi|300142021|gb|EFJ08726.1| hypothetical protein SELMODRAFT_272117 [Selaginella moellendorffii]
          Length = 536

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 91/587 (15%), Positives = 172/587 (29%), Gaps = 137/587 (23%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           + V L+G V   R  G  ++F  +    G  Q V++  S       +V +       G V
Sbjct: 54  TTVSLAGRVMSKRASGSKLVFYSLESAEGTIQAVSDARSLVGGNFAAVHANIK---RGDV 110

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------------------ 119
           +  S     +N   G++ +  ++I +L+    +       R+                  
Sbjct: 111 VGVSGNPGMSN--RGELSIFVKEIILLAPCLYMLPKGGKNRDEQATWRPGKPRNPNAYVL 168

Query: 120 YPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
             +  R++ RFLD+  +   K ++      +N +R  +    F E  T IL + +   A 
Sbjct: 169 KEQETRYRLRFLDIIVNPEVKFVLETAHSAVNYIRSFLDQRGFREVETAILNSKAGGAAA 228

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                         +L  AP+   + L+ +G++  +++   FR+E               
Sbjct: 229 RPFNTHHDASEMDMSLRIAPELQLKQLLVAGYNGVYEVDKQFRNEG-------------- 274

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
                      ++   N                         +    Y +D  DL     
Sbjct: 275 -----------MDLTHN-------------------PEFTTCEFYSAY-SDYHDL----- 298

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
              +TE  +    +  +   +V+   + +  P           D    + R +   GL  
Sbjct: 299 -MTMTEELLSGLVKKITGGYTVSYHSDGYDSPP-------VEIDFTPPFRRIEMVKGL-- 348

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                     +    P  K L          +     G         PL           
Sbjct: 349 -------EDTMGIELP--KDLASEEANEFLKKTCEARG----VYCAPPLTTSRLLDKL-- 393

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +   L      C    +I+D                 +P  M     +           
Sbjct: 394 -VGHYL---EETCVNPAFIID-----------------HPLIMSPLAKQHRSKP----GL 428

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++L  N  E+ +     +        F      ++  ++          +A + G+P
Sbjct: 429 TERFELFVNKHELVNAYTELNNPVEQRDRFVQQLKDRQGGDDEAMVLDEDFVKAMEYGLP 488

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
           P  G   GIDR+VMLL  + N++EV L           M  P  V  
Sbjct: 489 PCAGWGMGIDRLVMLLTDSLNIKEVLL--------CPAMKPPEAVPP 527


>gi|163841924|ref|YP_001626329.1| lysyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162955400|gb|ABY24915.1| lysyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 501

 Score =  155 bits (392), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/293 (20%), Positives = 111/293 (37%), Gaps = 19/293 (6%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  ++             G  V +SG V  +R  G + F+ +++  G         +
Sbjct: 40  RTHSLIEVRQKFDHLQADETSGEIVGVSGRVVFIRNTGKLCFVTLQEGSGTRLQGMLSLA 99

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              E  +S+     L   G  +    E I++    G++ + A   +++S A      +  
Sbjct: 100 NVGE--QSLADWKALVDLGDHVFLHGEVISSK--RGELSVFADSWQMVSKALRPLPVL-- 153

Query: 117 EREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSP 174
             +  E  R + R++DL  RD   + +  R  I  S+R  + + +++E   P+L      
Sbjct: 154 HADLNEENRVRQRYVDLMVRDEARQMVRTRAAITRSVRETLNSLDYVEVEGPVLQLIHGG 213

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F             L  A + Y +  +  G DR +++   FR+E   S   P EF
Sbjct: 214 ASARPFETHINAFDQKM-TLRIALELYLKRAVVGGIDRVYEMGRIFRNEGVDSTHSP-EF 271

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
             L+   ++ +Q  +   M  ++     +      +      I  D   +  G
Sbjct: 272 TMLECYEAYADQFVMAERMRQIILNAA-DLIGSRQIETPAGVIDLDGEWQWLG 323



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 63/205 (30%), Gaps = 29/205 (14%)

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
           +D  G    +G V   L+ V  + I      +   +        +     A      +  
Sbjct: 313 IDLDGEWQWLG-VYPGLSEVVGQKITPETKAETLQALAVEHEIKIDPAWDAEKLVVELF- 370

Query: 423 ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
              ++     +  ++ D+P        + +   H                         +
Sbjct: 371 -CELVEPKLLQPTFVYDYP-----PSAQPLARPHR----------------SEPGLIEAW 408

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGG 538
           DL+  G E  +         +  +  +   +     +           RA + G PP GG
Sbjct: 409 DLIIGGMERGTAFSELIDPVIQRERLTEQSLRAASGDPEAMQLDEDFLRALEYGAPPMGG 468

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           I  GIDR+VML  G   +RE  LFP
Sbjct: 469 IGLGIDRLVMLFTGVG-IRESILFP 492


>gi|296424997|ref|XP_002842030.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638287|emb|CAZ86221.1| unnamed protein product [Tuber melanosporum]
          Length = 579

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 66/340 (19%), Positives = 124/340 (36%), Gaps = 28/340 (8%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V + GWVHR+R    ++F+ +RD  G  Q + + D      A ++  E  + I G++  
Sbjct: 156 RVVVRGWVHRLRVQKSLVFITLRDGTGYLQCLLSGDLTKTYDALTLTVETTIAIYGVISP 215

Query: 80  RSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFLDLRRDT 137
              E    N      EL A   +++  A   +  +            ++  R L +R D 
Sbjct: 216 VPEE----NHAPDGHELHADYFQVIGKAPGGDDTISNIVAPNADPQTKYDNRHLVIRGDV 271

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R  ++ + R        +E + P +  +  EG       +   + ++  L Q+
Sbjct: 272 ASSVLKVRASVLRAFRKSYEDLGLLEVTPPCMVQTQVEGGSTLFEFNYYGEKAY--LTQS 329

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN------ 251
            Q Y +  + S     F +   FR E   + R   E+  ++ E++F+  DD+LN      
Sbjct: 330 SQLYLETCLPS-LGDVFCVQESFRAERSLTRRHLSEYTHIEAELAFITFDDLLNHLEEVI 388

Query: 252 -------TMENVLRGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLR--NPIIM-H 300
                    + +++G   E +         F+R+ Y DAI     +       NP     
Sbjct: 389 CRTINYALTDPLIKGKVAELNPKFEAPERPFMRMTYADAIGWLVENNIPNEEGNPHKFGD 448

Query: 301 NVTEHFVHSEFRVFSKI--LSVNPGYEVWAIPAKGGGGNR 338
           ++ E        + +K   L+  P         K     R
Sbjct: 449 DIAEAAERKMTDIIAKPIFLTKFPVKIKAFYMKKDPADPR 488



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 46/121 (38%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K       F M +         D    ++    L+    EI  G +R    E ++ A++ 
Sbjct: 470 KFPVKIKAFYMKKD------PADPRVTESVDC-LMPGVGEIVGGSMRMENLEELMGAYAR 522

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GIS     + +       + G  PHGG   G++R++  +     V+E SL+P     C 
Sbjct: 523 EGISP----DPYYWFTDQRKYGTSPHGGYGIGLERLLAWMCDRYTVKECSLYPRWTGRCT 578

Query: 571 L 571
            
Sbjct: 579 P 579


>gi|300121274|emb|CBK21654.2| unnamed protein product [Blastocystis hominis]
          Length = 723

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 81/387 (20%), Positives = 141/387 (36%), Gaps = 56/387 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVAN---PDSACFEIAKSVRSEW 69
            + +G  V + G    V   G   F+ +R H   +   +        A    A  +  E 
Sbjct: 155 ENHIGEEVLIRGRAFNVNHKGKCCFIILRQHVDSVQCCLFQGGAISKAMVNYAGKIPKES 214

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV----------------AEELPLP 113
           ++ I G+V        +A      +E+S QK+ ++S                 AE     
Sbjct: 215 IIDIYGIVQKVETPIESATFKN--VEISVQKVFVVSRVKVELPFQLDSAMRTDAEIAANE 272

Query: 114 VFGERE-----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
              E++          R  YR++DLR       +   + +    R  ++  +F+E  TP 
Sbjct: 273 ALDEKDRKFITVNPDTRLDYRWIDLRTPCNQAIVRLSSAVCLLFREYLLQNDFVEIHTPK 332

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG-FDRYFQIAPCFRDEDPRS 227
           +   + EG  +         GS   L Q+PQ YKQ+  A   F+R F+I P FR E+  +
Sbjct: 333 INPGTSEGGSNVFKLDYF--GSQACLAQSPQLYKQMTTACADFERVFEIGPVFRAENSNT 390

Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVF--------EEFSNGNTVSNNFL--- 275
            R   EF  LDMEM+  E   + +N + N+   +F        +E +             
Sbjct: 391 HRHLTEFVGLDMEMTIKEHYYEAVNMIANMFVYIFDGLNARFAKELNAVQQQHPFTPLVY 450

Query: 276 -----RICYDDAIR---RYGTD---KPDLRNPII--MHNVTEHFVHSEFRVFSK-ILSVN 321
                 + Y + ++     G D     DL  P+   +  + +   +++F +  K  LS+ 
Sbjct: 451 PKQTLILSYSEGMQLLIDNGFDVDPMGDLSTPMEKQLGRLVKEKYNTDFYILDKFPLSIR 510

Query: 322 PGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           P Y +          +     R  E  
Sbjct: 511 PFYTMPDPHNPKLSNSYDIFIRGEEIV 537



 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 60/164 (36%), Gaps = 22/164 (13%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
                D    + ++LG +    +      DF   +      K   +  PF          
Sbjct: 473 VDPMGDLSTPMEKQLGRLVKEKYN----TDFYILD------KFPLSIRPFYTMPD----- 517

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
                    +  YD+   G EI SG  R H  E++ +     GIS            ++F
Sbjct: 518 ---PHNPKLSNSYDIFIRGEEIVSGAQRIHDPELLAERAKACGISI----ESLHAYLQSF 570

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLM 573
             G  PH G   G++R+VML LG  N+R  S+FP     C+ L 
Sbjct: 571 SHGAYPHAGCGIGLERVVMLFLGLPNIRYTSMFPRDPKRCNPLS 614


>gi|258651099|ref|YP_003200255.1| lysyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258554324|gb|ACV77266.1| lysyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 504

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/325 (18%), Positives = 117/325 (36%), Gaps = 29/325 (8%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY-GITQVVANPD 55
           RT S  ++          +D G  V ++G V  +R  G + F+ +R+   G T       
Sbjct: 40  RTTSLAEIRRRFPDLPPDTDTGELVGVTGRVIFLRNSGKLCFVTLREGGAGDTGSELQIM 99

Query: 56  SACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   + +   + +   +D G  +      I +    G++ + A    I   A+ L    
Sbjct: 100 VSLAGVGEESLAAFKRDVDLGDHLFAHGRVITSR--RGELSVMADSWSI--AAKALRPLP 155

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-S 172
              +   E  R + R++DL  R    + +  R  +  S+R  +    F+E  TP+L    
Sbjct: 156 VAHKPLSEEARVRQRYVDLIVRPQARRTVELRAAVNRSLRATLHDRGFLEVETPMLQVLH 215

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F           + L  AP+ Y +     G +R F+I   FR+E   S   P 
Sbjct: 216 GGAAARPFSTHMNALDMQVF-LRIAPELYLKRAAVGGIERVFEINRNFRNEGVDSSHSP- 273

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN----------TVSNNFLRICYDDA 282
           EF  L+   ++ + + I      +++ V                   +   +  I    +
Sbjct: 274 EFAMLEAYQAYSDYNGIAELTRTLIQNVAIAVHGTTSVIHADGHEFDLGGEWPAITLYGS 333

Query: 283 IRRYGTDKPDLRNPI-IMHNVTEHF 306
           +      +  +R P+  +  + E  
Sbjct: 334 LSEAAGREITVRTPMSELIEIAEKH 358



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 57/157 (36%), Gaps = 28/157 (17%)

Query: 419 HIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +A+EL   ++        ++ D+P               +P T        L       
Sbjct: 370 KLAEELFDELVVDTLVAPTFVRDYP------------VETSPLTRDHRSEPGL------- 410

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               ++DL   G EIA+G        +  Q F        + ++          RA +  
Sbjct: 411 --TEKWDLYIRGTEIATGYSELVDPVIQRQRFQEQARFAGLGDDEAMVLDEEFLRAMEYA 468

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           MPP GG+  GIDR++M L G   +RE  LFP  +   
Sbjct: 469 MPPSGGMGMGIDRLMMALTGLG-IRETILFPFVRPGE 504


>gi|126459115|ref|YP_001055393.1| lysyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126248836|gb|ABO07927.1| lysyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 482

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 76/317 (23%), Positives = 129/317 (40%), Gaps = 40/317 (12%)

Query: 6   THSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           THS   L            +G+ +R++G V  VR H  ++FLD+ +     Q +A+P   
Sbjct: 35  THSIKALNELRRQALLDPWLGAVIRVAGRVTDVRRHPNVVFLDLYEDGARFQAMADPKLP 94

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
             E    +     + ++G ++             G   + A  I +L+ A + PLP +G+
Sbjct: 95  LLE---HIWRGDYVGVEGPLVKTQR---------GDYAVRATSITLLAKAVQ-PLPEWGK 141

Query: 118 REYPESIRFKYR----FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS- 172
            +       +YR     LDL    L   I  R R+I + R  M    F+E  TP+L    
Sbjct: 142 VDRDSPFYMRYRSVAMVLDL---QLRWRIAARARLIQAFREAMWRRGFVEIPTPVLQPIY 198

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F          +Y L  +P+ Y +  + +GF + F+I P FR+ED  +   P 
Sbjct: 199 GGAAARPFTTKVWAIDEEWY-LRISPELYLKRYIIAGFPKVFEIGPQFRNEDIDALHNP- 256

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAI 283
           EF+ L+   ++ +  +I+   E V+                      S  + RI   DA+
Sbjct: 257 EFWSLEAYQAYADYREIMKLTEEVVYEAIVAVLGTPVVKYREWSINFSPPWRRITLHDAL 316

Query: 284 RRYGTDKPDLRNPIIMH 300
           R +G + P+      + 
Sbjct: 317 REFGGEDPEKLTDDEIK 333



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 49/140 (35%), Gaps = 23/140 (16%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           ++     E  +++D+P     EE   +   H                        +++  
Sbjct: 359 LVEKKLVEPTFVLDYP-----EESTPLCKPHR----------------EKKGLVERFEAF 397

Query: 486 CNGFEIASGGIRNHMSEVMLQ--AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
             G EIA+     +      +          K+               GMPP GG+  G+
Sbjct: 398 VGGLEIANAYTELNDPVKQYEYFVREEELFPKDEAHPLDWDFVEELSFGMPPTGGVGIGV 457

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           DR+ M++  A+++++V  +P
Sbjct: 458 DRLAMIITNAESIKDVIPYP 477


>gi|323691833|ref|ZP_08106089.1| aspartate-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323504115|gb|EGB19921.1| aspartate-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 443

 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 65/268 (24%), Positives = 98/268 (36%), Gaps = 14/268 (5%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L     G  V+++G V  +R  G I F+ +R   G+ Q V        E+   ++ E  +
Sbjct: 19  LSYGKTGQEVKVNGAVMNIRNMGDIAFIILRKRDGVLQTVFEKGVTKAEL-SQLKEETFV 77

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL--PVFGEREYPESIRFKYR 129
            + G V                +EL    + ILS  E          +       R   R
Sbjct: 78  EVTGFVEPEER-------APHGVELRLTGVRILSWPEAPVPIAVSKWKMGASLEARLDMR 130

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR             I  + R  +  E F E  TP + A   EG  +       ++ 
Sbjct: 131 PLTLRNVRERARFKIEEGIARAFREFLQGEGFTEIHTPKIGARGAEGGANVFKLDYFHRP 190

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDD 248
           +  A  Q+PQ YKQ +M   FDR  +I P FR E   + R   E+  LD EM ++ +  D
Sbjct: 191 AVLA--QSPQFYKQ-MMVGVFDRVMEIGPVFRAEKHNTKRHLNEYTGLDFEMGYIDDFTD 247

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           I+      L+ +              LR
Sbjct: 248 IMAMETGFLQHMVSLLRTEYGQELGLLR 275



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 24/136 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF             D    ++  +DL+  G E+ 
Sbjct: 329 DFVFVTHYP------------SKKRPFYAMDD------PEDPRFTRS--FDLLFRGLEVT 368

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H    +L      G+  E +++        F+ GMPPHGG+  G++R+ M LLG
Sbjct: 369 TGGQRIHDYRELLAKIEKRGMDTEGMDD----YLNTFKYGMPPHGGLGIGLERMTMQLLG 424

Query: 553 AKNVREVSLFPMSQNF 568
            +NVREVSLFP   + 
Sbjct: 425 EENVREVSLFPRDMSR 440


>gi|50955651|ref|YP_062939.1| lysyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50952133|gb|AAT89834.1| lysyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 504

 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 13/263 (4%)

Query: 10  GDLGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           G L   +V    V ++G V  +R  G + F  ++   G          +  E+ +   + 
Sbjct: 60  GHLAADEVSAETVGVAGRVVFLRNTGKLCFAVLQSGDG---SRIQAMVSLAEVGEESLAR 116

Query: 69  WVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           W   +D G  +  S E I++    G++ + A   +I S A  +        E  E  R +
Sbjct: 117 WKEFVDLGDHVFVSGEVISSR--RGELSIMAVGWQIASKA--ILPLPNLHNELSEETRVR 172

Query: 128 YRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSR 185
            R+LDL  RD   +N++ R   + S+R       FIE  TP+L        AR F+  S 
Sbjct: 173 SRYLDLIARDRARRNVLDRAAAVASLRTTFADSGFIEVETPMLQVMHGGASARPFVTHSN 232

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                 + L  AP+ Y +  +  G DR F+I   FR+E   S  LP EF  L+   ++ +
Sbjct: 233 AFDTELF-LRIAPELYLKRAVVGGIDRVFEINRNFRNEGADSTHLP-EFAMLEAYQAYGD 290

Query: 246 QDDILNTMENVLRGVFEEFSNGN 268
            + I +  + +++      S  +
Sbjct: 291 YNTIADLTQALIQNAAVAVSGSH 313



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 52/141 (36%), Gaps = 26/141 (18%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +        ++MDFP      +   +   H                  L     ++DL  
Sbjct: 383 VKSGLVRPTFVMDFPV-----DTSPLVRVHR----------------SLPGVVEKWDLYM 421

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAG 542
            GFE+A+G        V  + F          ++          RA + GMPP GG+  G
Sbjct: 422 RGFELATGYSELVDPVVQRERFVEQARLAAAGDDEAMRLDEEFLRALEFGMPPTGGMGMG 481

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR++M L G   +RE  LFP
Sbjct: 482 IDRLLMALTGLG-IRETILFP 501


>gi|258574089|ref|XP_002541226.1| asparaginyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237901492|gb|EEP75893.1| asparaginyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 734

 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/295 (19%), Positives = 111/295 (37%), Gaps = 23/295 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G +H +R    IIF+ + D YG+ Q V   +      A ++  E  L I G +
Sbjct: 309 GTRVRVLGRIHHLRVQKDIIFVTLYDGYGLLQCVFTGNLIKSYDAMTLTLETSLAIHGEM 368

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRR 135
            +   +    +      EL A   +++  A  ++  +      +      +  R L LR 
Sbjct: 369 RAVPPKQHAPDNR----ELHADFFQVIGKAAGDKEAISTRVAPDADPQTLYDNRHLVLRG 424

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +T    +  R  ++ + R        +E + P +  +  EG           + ++  L 
Sbjct: 425 ETASSVMKVRAAVLRAFRAVFEKSRMLEVTPPAMVQTQVEGGATLFSFDYYGEPAY--LT 482

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           Q+ Q Y +  + S     F + P FR E   + R   E+  ++ E+ F+   D+L+ +E 
Sbjct: 483 QSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEYTHIEAELDFITFTDLLDHIEA 541

Query: 256 VLRGVFEEFSN--------------GNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           ++  V +                      S  F R+ Y +AI           + 
Sbjct: 542 IVCQVIDLVLADPQTAAAIKALNPSFTPPSRPFKRMKYAEAIEWLREHNIPNEDG 596



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 64/195 (32%), Gaps = 35/195 (17%)

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K +            ++ + D      GD       A  A   +     IIN    +  +
Sbjct: 575 KRMKYAEAIEWLREHNIPNEDGTPHTFGD-----DIAEAAERKM---TDIIN----QPIF 622

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           +  FP                 F M +   E L+  + + +      L+    EI  G +
Sbjct: 623 LTHFP------------VEIKAFYMKK-DPEDLRVTESVDV------LMPGVGEIVGGSM 663

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R    + ++ A++  G+        +       + G  PHGG   G++R +  + G   V
Sbjct: 664 RMDDWDELMDAYARQGMDPSP----YYWYTDQRKYGTSPHGGYGLGLERFLAWMCGRYTV 719

Query: 557 REVSLFPMSQNFCDL 571
           RE  L+P     C  
Sbjct: 720 RECCLYPRFTGRCTP 734


>gi|226499948|ref|NP_001141771.1| hypothetical protein LOC100273907 [Zea mays]
 gi|194705876|gb|ACF87022.1| unknown [Zea mays]
          Length = 437

 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 99/282 (35%), Gaps = 30/282 (10%)

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY--- 120
                      G ++        +N   G++ +  ++  +LS    +     GE      
Sbjct: 10  EFSKYHSGVKRGDIVGICGYPGKSN--RGELSVFPKRFVVLSPCLHMMPRQKGEGSAVPV 67

Query: 121 ----------------PESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIE 163
                            +  R++ R+LDL  +  +      R++I++ +R  +    F+E
Sbjct: 68  PWTPGMGRNIENYVLRDQETRYRQRYLDLMVNHEVRHIFKTRSKIVSFIRKFLDDREFLE 127

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             TP++   +   A    V           +  AP+ Y + L+  G DR ++I   FR+E
Sbjct: 128 VETPMMNMIAGGAAARPFVTHHNELNMRLFMRIAPELYLKELVVGGLDRVYEIGKQFRNE 187

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
                  P EF   +  M++ + +D++   E +L G+ ++ + G  +  +   +      
Sbjct: 188 GIDLTHNP-EFTTCEFYMAYADYNDLMELTETMLSGMVKDLTGGYKIKYHANGVTNP--- 243

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
                 + D   P    ++ +           K LS +    
Sbjct: 244 ----PIEIDFTPPFRRIDMIKDLEAMANLSIPKDLSSDEANR 281



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQ 530
                 +++L  N  E+ +     +   V  Q F      ++  ++    L      A +
Sbjct: 339 RPGLTERFELFVNKHEVCNAYTELNDPVVQRQRFEEQLKDRQSGDDEAMALDETFCTALE 398

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+ P GG   GIDR+ MLL  ++N++EV LFP  +
Sbjct: 399 YGLAPTGGWGLGIDRLTMLLTDSQNIKEVLLFPAMK 434


>gi|317144247|ref|XP_001819993.2| lysyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 463

 Score =  155 bits (391), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 73/319 (22%), Positives = 129/319 (40%), Gaps = 24/319 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
            +  +  G  V + G +   R  G  +IF DI  +    QV+ N         ++ +  +
Sbjct: 6   QINETVEGDSVVVCGRIRTYRLAGSKLIFFDIVQNGHKVQVMCNLRQLPGITPEAFKKLY 65

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVA-EELPLPVFGEREYPESIRFK 127
            L   G   S +          G++ + A ++ ++LS    ++PL        P      
Sbjct: 66  RLLRRGDAFSVTGRPH--RTGRGELTVVATELPQLLSPCLHDVPLDAKEHENSPYP---- 119

Query: 128 YRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSR 185
            R +  L   T    I  R+ II  +R   +  +F+E +TPI+ + +    AR F   + 
Sbjct: 120 -RHVQFLADQTTTDIIKARSAIIQYLRQFFLDRSFMEVNTPIVNSIAGGAIARPFYTSAT 178

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                  +L  AP+ + + L+  GFDR F+I P FR+E       P EF   +   ++  
Sbjct: 179 EFPDRQLSLRIAPELWLKRLVVGGFDRVFEIGPSFRNEGIDKTHNP-EFTTCEFYHAYAN 237

Query: 246 QDDILNTMENVLRGVFEEFSNGN----------TVSNNFLRICYDDAI-RRYGTDKPDLR 294
            +D+L+  E++L G+ +   + N            S  F RI +   I  + G   PDL 
Sbjct: 238 LEDLLSMTESLLSGMAQHIRDTNKDGTLKPTEVDFSTPFRRIDFLTGIEEKIGRKLPDLT 297

Query: 295 NPIIMHNVTEHFVHSEFRV 313
           +P  +  V + F      +
Sbjct: 298 SPDAVAQVKQLFKDLSLEI 316



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG---GLYRAFQCGMPP 535
           A + +L   G E+ +     +      + F +     +  +           A + G+P 
Sbjct: 368 AARGELFIEGKEVVNTYEEENSPSEQRRKFEDQVRYSKDADESSEIDESYLEALEWGLPA 427

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLF 562
            GG   GIDR+ ML  GAK + +V  F
Sbjct: 428 TGGWGCGIDRLCMLFTGAKRIADVLPF 454


>gi|291303742|ref|YP_003515020.1| lysyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290572962|gb|ADD45927.1| lysyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 501

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 69/310 (22%), Positives = 117/310 (37%), Gaps = 33/310 (10%)

Query: 4   YRTHSCGDLGVSD--------VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
            RT +   L             G    ++G V  VR  G + F  IR+  G    +    
Sbjct: 41  KRTTTLKRLREEYGHLEAEASTGVIASVTGRVIFVRTGGKLCFATIREGDGTQLQLMLSL 100

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +   E  +S+     L   G V++ + E I +    G++ + A + E+   A+ L     
Sbjct: 101 AKVGE--ESLGEWKRLIDIGDVVAVTGEVITSK--RGELSVMADEWEM--AAKALRPLPV 154

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +   E  R + R++DL  R         R  +++++R  M   +F+E  TP+L A +S
Sbjct: 155 AHKPMSEETRVRQRYVDLIMRPEARDTARNRAAVVHTLRDIMHQRDFMEVETPVLQAIAS 214

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F           Y L  A + Y +  +  G DR F+I+  FR+E   S   P E
Sbjct: 215 GANARPFTTHFNAINMDVY-LRIALELYLKRCVVGGIDRVFEISRNFRNEGADSTHSP-E 272

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  ++   ++ +   I     +++ G  E      TV+                 D  +L
Sbjct: 273 FSMMEAYEAYGDYRSIGRLTRDLVVGCAESVFGSTTVT---------------HADGTEL 317

Query: 294 RNPIIMHNVT 303
                   VT
Sbjct: 318 EFGGEWREVT 327



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 28/151 (18%)

Query: 419 HIAQELG--IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +A+EL   ++        +++D+P     EE   +  AH                    
Sbjct: 368 KLAEELFEHLVTDTLVNPTFVLDYP-----EETSPLTAAHR----------------DTP 406

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               ++DL   G E+A+G        V  + F          ++          RA + G
Sbjct: 407 GLTEKWDLYVRGVELATGYSELIDPVVQRERFEQQARLAAKGDDEAMKLDEDFLRAMEYG 466

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           MPP GG+  GIDR++M L G   +RE  LFP
Sbjct: 467 MPPTGGMGMGIDRLLMALTGLG-IRETILFP 496


>gi|67516065|ref|XP_657918.1| hypothetical protein AN0314.2 [Aspergillus nidulans FGSC A4]
 gi|40746564|gb|EAA65720.1| hypothetical protein AN0314.2 [Aspergillus nidulans FGSC A4]
 gi|259489456|tpe|CBF89742.1| TPA: aspartatyl tRNA synthetase, hypothetical protein (Eurofung)
           [Aspergillus nidulans FGSC A4]
          Length = 956

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 64/367 (17%), Positives = 131/367 (35%), Gaps = 29/367 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIA-----KSV 65
           +    VG  V     +H +R     ++FL  R      Q V + +     IA     + +
Sbjct: 142 ISADMVGQQVFFQARLHIIRRMSAKLVFLVFRQQLSTFQGVLHEEPGAKSIAMIQWAEHL 201

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-------- 117
           ++  ++ + G + +     +   +    +E+   ++ ++   E+       E        
Sbjct: 202 KTGCIVQVRGTIKAPDVPVLGCTVH--DVEVDIDEVHLVVRREDPVPFSVYEAEIRTAEE 259

Query: 118 -------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                      +  R   R LDLR  T       ++ + N  R  +  + FIE  TP L 
Sbjct: 260 DLVEGRRSHISDRTRLTNRLLDLRTPTSQSIFRIQSAVCNLFRSALDEQRFIEIHTPKLQ 319

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            ++ E        +   + +F A  Q+PQ  KQ+ +A+ F R ++I   FR E+  + R 
Sbjct: 320 GAATESGASVFDVNYFGRDAFLA--QSPQLAKQMAIAADFGRVYEIGAVFRAENSNTHRH 377

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             E+  LD+EMS  E   ++L  ++ V++ + +            ++  +      +  +
Sbjct: 378 LTEYTGLDIEMSIEEHYHEMLEVLDAVIKNILKGIYTRYRREIEIIKHQFPSEDLVWLDE 437

Query: 290 KPDLRNPIIMHNVTE---HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
            P +R    +  + E              K L       +  +  +    +    D+   
Sbjct: 438 TPIIRFSDGIKMLNESGWRDDEGNPLAEDKDLGTRDEIRLGELVKEKYKTDYYVLDKFPV 497

Query: 347 WARSQGQ 353
            AR    
Sbjct: 498 DARPFYA 504



 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 40/165 (24%), Positives = 64/165 (38%), Gaps = 19/165 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF       +    N         +D+   G EI SGG R H   ++ +    
Sbjct: 494 KFPVDARPFYAMPDPDDPRFTN--------SFDMFIRGQEIVSGGQRIHDPHMLEENMRR 545

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           VGI+ + +E         F+ G PPH G   G++R++ML+L   N+R  S+F        
Sbjct: 546 VGINPDTMEE----YMEGFRWGAPPHAGAGIGLERMLMLILKLGNIRLASMFHRDPKSF- 600

Query: 571 LLMGSPSTVSVEQLRELGLRIVENP-KKILKISVTTILRNVYGLK 614
                P+     QLR      +E P  K  + +V      +  ++
Sbjct: 601 -----PAKPPALQLRHPESSTIEPPWVKERRGTVAQSESELQPIE 640


>gi|240047394|ref|YP_002960782.1| asparaginyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239984966|emb|CAT04959.1| Asparaginyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 447

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/266 (21%), Positives = 104/266 (39%), Gaps = 14/266 (5%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVLCI 73
                +++ GWV  +R +  I F++I D   I  +      D   FE   ++     + +
Sbjct: 13  HSSENLKIKGWVTNIRGNLNIKFVEINDGSSIVNLQCVLKKDKIDFEKISNLSLGSAIEV 72

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+         +        EL   KI+ILS+++    P+   +E       +   +  
Sbjct: 73  SGVFKYTPERQQSG-------ELIVDKIDILSLSDVNEFPIQ-NKETTVEFLRQIPHIRH 124

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R       +  R+ +   +      E F+  S PILT++  EGA +  +     +G F+ 
Sbjct: 125 RTKLFRAVMRLRSALFFEINSFFENEGFLNFSAPILTSNDGEGAGETFLVDD-EKGGFFN 183

Query: 194 LPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                    Q      A GF + +  AP FR E   + +   EF+ ++ E++F    DI+
Sbjct: 184 KKTTLGVTGQLHAESYALGFGKVYTFAPTFRAEKSNTKKHAAEFWMVEPEVAFFNLQDII 243

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLR 276
              + +L+ V +     N    +FL 
Sbjct: 244 GLGDKMLKFVIKNVLEKNKDEFDFLE 269



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 69/224 (30%), Gaps = 34/224 (15%)

Query: 352 GQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV-------RLDMQDGDSCFFIAG 404
           G   L ++   + E         + K+L I   + +         ++D +D         
Sbjct: 246 GDKMLKFVIKNVLEKNKDEFDF-LEKYLGIKIRQRLLEFYKSPVKQIDYKDAIELLLKHK 304

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
           D  +       A      E  +          ++++P        K +      F M Q 
Sbjct: 305 DQFEVQDLYFGADLKTEHERFLAENIFNAPVAVINYP--------KSLKA----FYMHQN 352

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                            +DL+  G  E+  G  R    E +L+    + +S    +    
Sbjct: 353 DD---------GKSVAAFDLLVPGIGELIGGSQREVRYEKLLERIQELNMS----QEDLQ 399

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                 + G     G   G +R+VM + G  N+R+V  FP +  
Sbjct: 400 WYLDLRKFGNAGSSGFGLGFERLVMYITGIDNIRDVIPFPRTNK 443


>gi|308159144|gb|EFO61691.1| Lysyl-tRNA synthetase [Giardia lamblia P15]
          Length = 576

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 103/253 (40%), Gaps = 4/253 (1%)

Query: 15  SDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
                 V ++G +H +R  G  ++F  I       Q+ A+       +      +  +  
Sbjct: 106 EMAEEQVSVAGRIHSIRTSGAKLVFYTIHGDNDRLQIFAHVPKETSHVKLEFDWDVTVST 165

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
                            +G++ +   ++ +LS      +P         + RF+ R+LD 
Sbjct: 166 LHRGDIVGVRGYPTTTKSGELSIIPVQLVLLSPCL-HMIPNSPSALTDINARFRQRYLDF 224

Query: 134 RRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             +   + IV+R+ IIN +R  M    N++E  TP+L       A    V    + G   
Sbjct: 225 IINNTGQKIVQRSGIINFIRRFMIDQRNYLEVETPMLQTVHGGAAAQPFVCRSNDLGHDV 284

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+ + + L+  G +R F+I   FR+E       P EF  ++   ++ + +D+ + 
Sbjct: 285 YLRIAPELFLKRLVVGGLNRVFEINKNFRNESSDQTHSP-EFTMMEAYSAYDDLEDMCDL 343

Query: 253 MENVLRGVFEEFS 265
           +E+++  +   ++
Sbjct: 344 VEDLVSRLVRWYN 356


>gi|256833305|ref|YP_003162032.1| lysyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686836|gb|ACV09729.1| lysyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 515

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 117/278 (42%), Gaps = 23/278 (8%)

Query: 5   RTHSCGDLGVS----DVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPD 55
           RTH+ G +       ++G      V ++G V  +R  G + F+ I+D  G   QV+ +  
Sbjct: 46  RTHTIGQIRAGYAHLELGEETEDVVGVAGRVVFLRNTGKLCFVAIQDGDGQRLQVMLSQG 105

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               +     ++   L   G  +      I++    G++ + A +  + + +      ++
Sbjct: 106 EVGAQSLADFKATVDL---GDHLFAKGRVISSR--RGELSVFASQWSLAAKSLRPLPNLY 160

Query: 116 GERE-----YPESIRFKYRFLDLRRDTLHKNIVKR-TRIINSMRCRMIAENFIECSTPIL 169
              +       E  R + R++DL      ++  +  ++++ S+R    A +F+E  TP+L
Sbjct: 161 AREDGTTAELSEEARVRQRYVDLIARPAARDAARLRSQVVRSLRDNFHARDFMEIETPML 220

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T      AR F+          Y L  AP+ + +  +  G +R F+I   FR+E   S 
Sbjct: 221 QTIHGGAAARPFVTHMNAFDMDLY-LRIAPELFLKRAVVGGLERVFEINRNFRNEGVDSS 279

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
             P EF  L+   ++ + + +    +++++    +  +
Sbjct: 280 HSP-EFAMLEAYEAYGDYNTMAVLTQDLVQTAARDAFD 316



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 58/169 (34%), Gaps = 30/169 (17%)

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
           DP K           + +    +  + +   ++ DFP               +P T    
Sbjct: 373 DPKKVSH--GKLVEELWEHF--VGHDLWAPTFVRDFP------------VETSPLTRDHR 416

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF-- 522
            +              ++DL   GFE+A+         +  Q F    +     ++    
Sbjct: 417 SIP---------GVVEKWDLYVRGFELATAYSELVDPVIQRQRFEAQAVLAAAGDDEAMV 467

Query: 523 --GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                  A +  MPP GG+  G+DR++M L G   +RE  LFP+ +   
Sbjct: 468 LDEDFLTAMEYAMPPSGGMGMGLDRLLMALTGLG-IRETILFPLVKPAQ 515


>gi|145590943|ref|YP_001152945.1| lysyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145282711|gb|ABP50293.1| lysyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 486

 Score =  154 bits (390), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 72/299 (24%), Positives = 123/299 (41%), Gaps = 32/299 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G+ +R +G V  VR H  ++F+D+ +     QV+A+P     E    V     + ++G 
Sbjct: 53  LGATIRTAGRVTDVRRHPNVVFIDLYEDGARFQVMADPKLPVLE---HVWRGDFIGVEGP 109

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR----FLD 132
           ++             G   + A  I +L+ A + PLP +G+ +       +YR     LD
Sbjct: 110 LVKTQR---------GDYAVKASSIVLLAKAVQ-PLPEWGKVDRSSPFYMRYRSVAMVLD 159

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSF 191
           L    L   +  R R+I + R  M    F+E  TP+L        AR F          +
Sbjct: 160 L---QLRWRVAARARLIQAFREAMWRRGFLEIPTPVLQPIYGGAAARPFTTKIWAIDEEW 216

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  +P+ Y +  + +GF + F+I P FR+ED  +   P EF+ L+   ++ +  DI+ 
Sbjct: 217 Y-LRISPELYLKRYIIAGFPKVFEIGPQFRNEDIDALHNP-EFWSLEAYQAYADYKDIMR 274

Query: 252 TMENVLRGVFEEFSNG---------NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
             E V+                      S  + R+   DA+R +    PD      +  
Sbjct: 275 LTEEVVYEAVRAVLGTGVVKYREWSINFSPPWRRVTLHDALREFAGVDPDRLTDDDIKE 333



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 51/140 (36%), Gaps = 23/140 (16%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           ++     +  +++D+P     EE   +   H                   +    +++  
Sbjct: 358 LVEKKLVQPTFVLDYP-----EESTPLCKPHR----------------EKAGLVERFEAF 396

Query: 486 CNGFEIASGGIRNHMSEVMLQ--AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
             G EIA+     +      +  A       K+               GMPP GG+  G+
Sbjct: 397 VGGLEIANAYTELNDPVKQYEFFAREEELFPKDEAHPLDWDFVEELSFGMPPTGGVGIGV 456

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           DR+ M++  A+++++V  +P
Sbjct: 457 DRLAMIITNAESIKDVIPYP 476


>gi|261880137|ref|ZP_06006564.1| lysine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270333107|gb|EFA43893.1| lysine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 267

 Score =  154 bits (390), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 92/216 (42%), Gaps = 9/216 (4%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V ++G +   R  G   F++++D  G  QV    D  C    K + ++    +  +  
Sbjct: 52  REVVIAGRMMSRRVMGKASFMELQDSKGRIQVYVTRDDICPGEDKDLYNKVFKKLLDIGD 111

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------REYPESIRFKYRFLD 132
               +       TG+I + A++I++LS + +    V  +      +     +R + R++D
Sbjct: 112 FIGIKGFVFRTQTGEISVHAKEIKLLSKSLKPLPIVKYKDGVAYDKFDDPELRARQRYVD 171

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +  + +  +KR  ++ +MR       + E  TPIL + +    AR F+         
Sbjct: 172 LVVNDGVKETFLKRATVLRTMRKFFDEAGYTEVETPILQSIAGGASARPFITHFNALNID 231

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
            Y +  A + Y + L+  GF+  ++I   FR+E   
Sbjct: 232 MY-MRIATELYLKRLIVGGFEGVYEIGKNFRNEGMD 266


>gi|148272033|ref|YP_001221594.1| lysyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147829963|emb|CAN00890.1| lysS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 513

 Score =  154 bits (390), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 58/257 (22%), Positives = 102/257 (39%), Gaps = 12/257 (4%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            +    V ++G V   R  G + F  ++   G          +  E+ +   + W   +D
Sbjct: 75  EETDHVVGIAGRVVHFRNTGKLCFATLQAGDGT---RIQAMISLAEVGEEALAAWKELVD 131

Query: 75  -GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +  +   I +    G++ + A +  I S A           E  +  R + R+LDL
Sbjct: 132 LGDHVFVAGRVIASR--KGELSIMAAEWRIASKAL--LPLPNLHSELSDETRVRSRYLDL 187

Query: 134 R-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             RD   KN++ R ++  SMR       ++E  TP+L        AR F+  S       
Sbjct: 188 IVRDQARKNVLDRAKVNASMRETFRQRGYVEVETPMLQVMHGGASARPFVTHSNAFDTEM 247

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ Y +  +  G DR F+I   FR+E   S   P EF  L+   ++ +   I  
Sbjct: 248 Y-LRIAPELYLKRAVVGGIDRVFEINRNFRNEGADSTHSP-EFAMLEAYEAYGDYTSIAE 305

Query: 252 TMENVLRGVFEEFSNGN 268
             + +++      +  +
Sbjct: 306 LTQTLVQDAAMAVAGSH 322



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 61/181 (33%), Gaps = 30/181 (16%)

Query: 389 VRLDMQDGDSCFFIAGDPLKFCSFA--ADARNHIAQELGIINCNCFEFCWIMDFPFYEWN 446
                  GD    IA         +        + +    +        +++DFP     
Sbjct: 354 DITPATTGDELQAIADREGVVVPLSTHGKLVEELWEHF--VKGGLERPTFVLDFP----- 406

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
                     +P T     +E             ++DL   GFE+A+G        V  +
Sbjct: 407 -------VETSPLTRAHRSIE---------GVVEKWDLYIRGFELATGYSELVDPVVQRE 450

Query: 507 AFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F +        ++          RA + GMPP GG+  G+DR++M + G   +RE  LF
Sbjct: 451 RFVDQARQSARGDDEAMPLDEEFLRALEHGMPPSGGMGMGVDRLLMAITGLG-IRETILF 509

Query: 563 P 563
           P
Sbjct: 510 P 510


>gi|323484764|ref|ZP_08090121.1| hypothetical protein HMPREF9474_01872 [Clostridium symbiosum
           WAL-14163]
 gi|323401870|gb|EGA94211.1| hypothetical protein HMPREF9474_01872 [Clostridium symbiosum
           WAL-14163]
          Length = 443

 Score =  154 bits (390), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 65/268 (24%), Positives = 98/268 (36%), Gaps = 14/268 (5%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L     G  V+++G V  +R  G I F+ +R   G+ Q V        E+   ++ E  +
Sbjct: 19  LSYGKTGQEVKVNGAVMNIRNMGDIAFIILRKRDGVLQTVFEKGVTKAEL-SQLKEETFV 77

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL--PVFGEREYPESIRFKYR 129
            + G V                +EL    + ILS  E          +       R   R
Sbjct: 78  EVTGFVEPEER-------APHGVELRLTGVRILSRPEAPVPIAVSKWKMGASLEARLDMR 130

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            L LR             I  + R  +  E F E  TP + A   EG  +       ++ 
Sbjct: 131 PLTLRNVRERARFKIEEGIARAFREFLQGEGFTEIHTPKIGARGAEGGANVFKLDYFHRP 190

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDD 248
           +  A  Q+PQ YKQ +M   FDR  +I P FR E   + R   E+  LD EM ++ +  D
Sbjct: 191 AVLA--QSPQFYKQ-MMVGVFDRVMEIGPVFRAEKHNTKRHLNEYTGLDFEMGYIDDFTD 247

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           I+      L+ +              LR
Sbjct: 248 IMAMETGFLQHMVSLLRTEYGQELGLLR 275



 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 24/136 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF             D    ++  +DL+  G E+ 
Sbjct: 329 DFVFVTHYP------------SKKRPFYAMDD------PEDPRFTRS--FDLLFRGLEVT 368

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H    +L      G+  E +++        F+ GMPPHGG+  G++R+ M LLG
Sbjct: 369 TGGQRIHDYRELLAKIEKRGMDTEGMDD----YLNTFKYGMPPHGGLGIGLERMTMQLLG 424

Query: 553 AKNVREVSLFPMSQNF 568
            +NVREVSLFP   + 
Sbjct: 425 EENVREVSLFPRDMSR 440


>gi|126465208|ref|YP_001040317.1| aspartyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126014031|gb|ABN69409.1| aspartyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 418

 Score =  154 bits (390), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 77/342 (22%), Positives = 141/342 (41%), Gaps = 33/342 (9%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLCIDGLV 77
           R+ GW+ R++  G ++ +++  +  +   V     N +   +E AK +     LC +G  
Sbjct: 2   RICGWIIRLKIVGKVVIIEVSGNTSVKPYVLVLKKNREPELYEEAKKLSVGTALCFEG-- 59

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
                ++       G +E   +K++I S   E LP+   G+       R KYR+L +R  
Sbjct: 60  ----EKSPVQKSKRG-VEYIVKKLKIYSKPLEPLPVDTVGKVPALLDTRIKYRYLLVRNP 114

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                   R  II + R       FIE  TP + A+  EG             ++  L Q
Sbjct: 115 VEKAIFRIRAGIIEAARQYFNNNGFIEIHTPKIVAAGAEGGATLFPVQYFENKAY--LSQ 172

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMEN 255
           +PQ YKQ+L+A GF R F+I P FR E   + R   E + +D E  F++  +D+LNT+E+
Sbjct: 173 SPQLYKQMLIA-GFPRVFEITPYFRAEKFNTTRHLNESWGIDAEQGFIDSVEDVLNTLED 231

Query: 256 VLRGVFEEFSNGNTVS------------NNFLRICYDDAIRRYGTDKPDLRNPIIMHN-- 301
           ++  +                         F R+ +++AI    ++  ++     + +  
Sbjct: 232 LIVYINNYIRKNYVEEQETLGIEIEKLDKPFKRLKFEEAIDLLRSEGLEVSEGEDLSDAA 291

Query: 302 ---VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
              + E      ++++  I         + +  + G   R F
Sbjct: 292 EKKLGEIMEEKGYKIYFIIGFPWQATGFYYMREEDGYHTRKF 333



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 81/229 (35%), Gaps = 41/229 (17%)

Query: 340 FCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSC 399
             + +  +  +  +    Y+  +      +  +    K L       +     ++     
Sbjct: 228 TLEDLIVYINNYIRKN--YVEEQETLGIEIEKLDKPFKRLKFEEAIDLLRSEGLEV---- 281

Query: 400 FFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF 459
                   +    +  A   + +   I+    ++  +I+ FP                 F
Sbjct: 282 -------SEGEDLSDAAEKKLGE---IMEEKGYKIYFIIGFP----------WQATG--F 319

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
              +                 ++DL   G EIASGG R H  + ++ A  + G++     
Sbjct: 320 YYMREED---------GYHTRKFDLDYKGLEIASGGQREHRYDKLVSALKDKGLNP---- 366

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             F     AF+ GMPPHGG   GI+R++M +LG +N+RE  LF   +  
Sbjct: 367 EDFAFYLEAFKYGMPPHGGFGLGIERLMMKMLGLENIREAILFVRDRTR 415


>gi|284034303|ref|YP_003384234.1| lysyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283813596|gb|ADB35435.1| lysyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 506

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 61/294 (20%), Positives = 109/294 (37%), Gaps = 22/294 (7%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVAN 53
           RTH   DL            +  G  V ++G V  +R  G + F+ +R+  G   QV+ +
Sbjct: 46  RTHLLKDLRARYDGQDLAPDTRTGEQVAVAGRVIFLRNTGKLCFVRLREGDGTELQVMLS 105

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
                 E     ++   L   G ++S   E + +    G++ + A   ++   A+ L   
Sbjct: 106 LADVGEEELARFKA---LVDIGDLISVHGEVVTSR--RGELSVQAAGWQM--AAKTLRPL 158

Query: 114 VFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-A 171
                   E  R + R++DL  R      +  +  ++ S+R    A  F+E  TP L   
Sbjct: 159 PNEHNPLSEEARVRMRYVDLIVRPEARDMVRTKAAVLKSLRATFDAHTFVEVETPTLQLT 218

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F             L  A +   +  M  G DR ++I   FR+E   S    
Sbjct: 219 NGGAAARPFRTHLNAFDQEML-LRIALELDLKRAMIGGVDRVYEIGRTFRNEGLDST-HA 276

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            EF  ++   ++ + D +   +E ++R            + +   I  D   R 
Sbjct: 277 AEFSMIEAYQAYGDYDSMAVLIEELIRNAARAVGRTVITARDGSTIDLDQPWRH 330



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 65/193 (33%), Gaps = 32/193 (16%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFC----SFAADARNHIAQELGIINCNCFEF 434
           L  + +E +   +D     +      +  +        A +    I ++L  +     + 
Sbjct: 333 LFELVSEVVGEEVDASTEAAALIKIAERHEVELQPGWNAGEIALEIYEKL--VEHTLIQP 390

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            ++ D+P     E  + +   H                         +DL+ NG E+   
Sbjct: 391 TYVRDYP-----ESVRPLAKPHR----------------ERPGLVEAWDLIINGVELGVA 429

Query: 495 GIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
               +   +  +      +                 RA + GMPP GG+  G+DR+VML 
Sbjct: 430 YSELNDPVIQRERLVAQSLLAAAGDPEAMELDEDFLRAMEFGMPPAGGMGMGLDRLVMLF 489

Query: 551 LGAKNVREVSLFP 563
            GA  +RE  LFP
Sbjct: 490 TGAG-IRETILFP 501


>gi|307128652|ref|YP_003880682.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306483114|gb|ADM89984.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 463

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 68/338 (20%), Positives = 117/338 (34%), Gaps = 50/338 (14%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IAKSVRSEWVLCIDGL 76
             + + GWV   R +    FL+I D   +  +    D+  F     K +     L I G+
Sbjct: 21  KKINVKGWVKHFRYN---YFLNINDGSSLKDLQIIIDNKYFNNFFLKKINIGVSLEIIGI 77

Query: 77  VMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGEREYPESIRFKYRFLDLR 134
           ++    +  N       IE+ A +I+I      E L   +  ++++      +  +L  R
Sbjct: 78  LVLSKGKKQN-------IEIYANRIKIFGSFKMEYLQKTILQQKKHSLKKLREQSYLRFR 130

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS---- 190
            +     +  R  I  S+      +NF   +TPI+T    EGA D    +  N       
Sbjct: 131 TNIFSSIMRIRHHIAFSIHKFFYKKNFFYINTPIITTYDTEGAGDMFKVTTFNFKKIPIN 190

Query: 191 -------------FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                         +       Q +    ASG  + +   P FR E   + R   EF+ +
Sbjct: 191 ELGEINNTLDFFGDFTYLTVSGQLQGEAAASGLGKIYTFGPTFRAEKSNTFRHLSEFWMI 250

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-----------------RICYD 280
           + EM+F + +  +   EN+L+ V +           FL                 RI Y 
Sbjct: 251 EPEMAFYKLNHNMILAENLLKYVIKYVIKHCYDDLFFLEKKNINRLYSILNSSFQRISYT 310

Query: 281 DAIRRYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSK 316
           +AI+   + K     P+       +EH        F  
Sbjct: 311 NAIKIIKSSKYKFFFPVKWGTDLQSEHEKFLSEHYFHN 348



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +  N  EI  G  R      +L+    + ++ + +           + G  PH G   G 
Sbjct: 380 IFPNIGEIIGGSQREERYNFLLKRMIELNLNIKSLW----WYLNIRRFGSVPHSGFGLGF 435

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R++  +    N+++   FP  Q 
Sbjct: 436 ERLIQFITNINNIKDNIPFPRFQK 459


>gi|297526525|ref|YP_003668549.1| aspartyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255441|gb|ADI31650.1| aspartyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 443

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 79/342 (23%), Positives = 143/342 (41%), Gaps = 33/342 (9%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLCIDGLV 77
           R+ GW+ R++  G ++ +++  +  +   V     N +   FE AK +     LC +G  
Sbjct: 27  RICGWIIRLKIVGKVVIIEVSGNTSVKPYVLVLKKNREPELFEKAKKLSIGTALCFEG-- 84

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRD 136
                ++       G +E   +K+EI S   E LP+   G+       R KYR+L +R  
Sbjct: 85  ----EKSPVQKSKRG-VEYIVRKLEIYSEPLEPLPVDTVGKVPALLDTRIKYRYLLVRNP 139

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                   R  II + R       FIE  TP + A+  EG          +  ++  L Q
Sbjct: 140 VEKAVFRIRAGIIEAARQYFNNNGFIEIHTPKIVAAGAEGGATLFPIQYFDNKAY--LSQ 197

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMEN 255
           +PQ YKQ+L+A GF R F+I P FR E   + R   E + +D E  F+   +D+LNT+E+
Sbjct: 198 SPQLYKQMLIA-GFPRVFEITPYFRAEKFNTTRHLNESWGIDAEQGFINGVEDVLNTLED 256

Query: 256 VLRGVFEEFSNG------------NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN-- 301
           ++  + +                   +   F R+ +++AI    ++  ++     + +  
Sbjct: 257 LIVYINDYIRKNYVEEQEILGTEIEKLEKPFKRLRFEEAIDLLRSEGLEVSEGEDLSDAA 316

Query: 302 ---VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
              + E      ++++  I         + +  + G   R F
Sbjct: 317 EKKLGEIMEEKGYKIYFIIGFPWQSTGFYYMREEDGYHTRKF 358



 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/190 (23%), Positives = 74/190 (38%), Gaps = 29/190 (15%)

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
            I   E    RL  ++        G +  +    +  A   + +   I+    ++  +I+
Sbjct: 279 EIEKLEKPFKRLRFEEAIDLLRSEGLEVSEGEDLSDAAEKKLGE---IMEEKGYKIYFII 335

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            FP                 F   +                 ++DL   G EIASGG R 
Sbjct: 336 GFP----------WQSTG--FYYMREED---------GYHTRKFDLDYKGLEIASGGQRE 374

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
           H  + ++ A  + G++       F     AF+ GMPPHGG   GI+R++M +LG +N+RE
Sbjct: 375 HRYDKLVSALKDKGLNP----EDFAFYLEAFKYGMPPHGGFGLGIERLMMKMLGLENIRE 430

Query: 559 VSLFPMSQNF 568
             LF   +  
Sbjct: 431 AILFVRDRTR 440


>gi|15828873|ref|NP_326233.1| lysyl-tRNA synthetase (lysine--tRNA ligase) (LysRS) [Mycoplasma
           pulmonis UAB CTIP]
 gi|39932449|sp|Q98QG4|SYK2_MYCPU RecName: Full=Lysyl-tRNA synthetase 2; AltName: Full=Lysine--tRNA
           ligase 2; Short=LysRS 2
 gi|14089816|emb|CAC13575.1| LYSYL-TRNA SYNTHETASE (LYSINE--TRNA LIGASE) (LYSRS) [Mycoplasma
           pulmonis]
          Length = 491

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 52/267 (19%), Positives = 106/267 (39%), Gaps = 22/267 (8%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF-- 59
            +Y   +  +L    +   + ++G +   R      F+ I+D  G  Q+  +        
Sbjct: 46  QKYSNLTKDELLEKQI--KLIVAGRILTQRGP----FIVIQDTNGKIQLYIDKKELEERK 99

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           E    +    ++ + G +M           + G++ +     ++L+              
Sbjct: 100 ETLALLDIGDIIYVKGTLM---------KTMKGELTIKVNFFDLLTKGLTPLAE-KYHGL 149

Query: 120 YPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGA 177
                R++ R+LDL  +   K     RT+II+ +R     +NF+E  TP+L +      A
Sbjct: 150 VDVEERYRKRYLDLISNPNIKEIFWTRTKIISKIREFFDKQNFMEVETPMLHSILGGASA 209

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           R F         SF  L  A +   + L+  G DR ++I   FR+E   +   P EF  +
Sbjct: 210 RPFKTYHNSLSSSF-NLRIATELPLKKLLVGGIDRVYEIGRIFRNEGIDTTHNP-EFTSI 267

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEF 264
           +   ++   + ++   EN+++ + +E 
Sbjct: 268 EFYQAYSNLEIMMEQTENLIKFIAKEL 294



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 73/218 (33%), Gaps = 16/218 (7%)

Query: 357 AYIFWRLDESGNVAGMGPVAKHLN-------IVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
           AY    +        +  +AK L         V  + +     +   D+        + F
Sbjct: 272 AYSNLEIMMEQTENLIKFIAKELGLSKIKNHDVEIDLLADFKKINMVDAV--SEATKVDF 329

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
            +   +    IA+   I     F+   I++   +E   E+  I          +    + 
Sbjct: 330 RNIDLNKAIEIAKSYKIKVEKYFKVGHIIN-ELFELLIEKTLIQPTFVMGYPIEVSPLAA 388

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
              D       + +L  N  E A+     +      + F      KE             
Sbjct: 389 CSKD--KRFTERAELFINTKEYANMFTELNDPLDQRRRFEAQFEEKESGNEEASEIDEDF 446

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A + G+PP GG   GIDR+VMLL   +++REV LFP
Sbjct: 447 LNALEYGLPPAGGCGIGIDRLVMLLTQKESIREVILFP 484


>gi|312215932|emb|CBX95884.1| hypothetical protein [Leptosphaeria maculans]
          Length = 448

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 98/228 (42%), Gaps = 9/228 (3%)

Query: 48  TQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
                  D    +  ++++   ++ + G        T       G++ + A+++ +L+  
Sbjct: 3   QLQECKADVPFEKQHENIQRGDIIGVIGF----PGRTNPKKGGEGELSIFAREVILLTPC 58

Query: 108 EELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECST 166
             + LP        +  R + RFLDL  + T     + R++I+  +R  +   +F+E  T
Sbjct: 59  LRM-LPTEHFGYKDQEQRHRNRFLDLIMNDTTRDTFITRSKIVKYVRKYLDERDFLEVQT 117

Query: 167 PILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           P++   +    AR F           + +  AP+ Y + L+  G ++ ++I   FR+E  
Sbjct: 118 PMMNKIAGGATARPFKTYHNELDMELF-MRIAPELYLKQLVVGGLEKVYEIGRQFRNEGI 176

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
                P EF   +  M++ + +D+L+  E ++ G+ +E + G     +
Sbjct: 177 DLTHNP-EFTTCEFYMAYADYNDVLDMTEELVSGLVKEVTGGYETVYH 223



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 12/117 (10%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQC 531
                +++      EI +     +        F      K   ++          +A + 
Sbjct: 327 PGLCERFEAFVCKKEICNAYTELNDPFDQRLRFEEQANQKSQGDDEAQLIDETFCQALEY 386

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP--------MSQNFCDLLMGSPSTVS 580
           G+PP GG   GIDR+VM L    +++EV  FP          Q   +++  +P  V 
Sbjct: 387 GLPPTGGWGMGIDRLVMFLTDHYSIKEVLTFPFMKDVVEDKKQTAAEVVGVTPKPVE 443


>gi|255263772|ref|ZP_05343114.1| lysyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255106107|gb|EET48781.1| lysyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 486

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 54/319 (16%), Positives = 118/319 (36%), Gaps = 28/319 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVRSEWVLCIDGLVM 78
           V ++G +H +R  G  +F+D+RD  G  QV ++        E+   ++      ++G+V 
Sbjct: 51  VTVAGRIHAIRNSG--MFVDLRDATGRIQVYSDVKGGGPIAEMLALMKVGDFASVEGVVR 108

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                        G++ +++  +++ S A    +P            ++ R++DL  +  
Sbjct: 109 RTGR---------GELTVNSTDVKLQS-AMIGEMPDKHHGMSDVEAIYRARYIDLVSNQD 158

Query: 139 HKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
            K+    R++I+ ++R      +++E  TP+L   S   A            S + L  A
Sbjct: 159 SKDRFLARSKIVRAIRRTFEGMDYVEVETPMLHPISGGAAARPFTTHYNALDSQFYLRIA 218

Query: 198 PQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           P+ Y + L+  G     F+I   FR+E       P EF  L+   +F + + +   +  +
Sbjct: 219 PELYLKRLIVGGLAPGVFEINRNFRNEGVSKKHNP-EFTMLEAYEAFADFETMKQRIAEI 277

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
                   +   T +     + +    +            I M  + ++ +  +FR    
Sbjct: 278 CEAACVAVNGSTTATYQGTELSFKAPFQ-----------EIEMAELIKNTLGIDFREIPD 326

Query: 317 ILSVNPGYEVWAIPAKGGG 335
             +         +      
Sbjct: 327 AAAARAAMAEKGVEVPADA 345



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMS 501
           ++   E   I   H   TM    +  L    L   +   +++   NG+EIA+     +  
Sbjct: 355 FDEYGEATLIQPTH--VTMYPSEISPLSKPCLDDPRFCERFESFANGWEIANAFSELNDP 412

Query: 502 EVML-----QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           E  L     Q   +    +   E  +     A    MPP GG+  GIDR+ MLL  A ++
Sbjct: 413 EKQLAIFEGQVAQDASRGETEREVDYE-YVAALDFAMPPTGGLGLGIDRLAMLLTDATHI 471

Query: 557 REVSLFPMSQNFCD 570
           +EV LFP  +   D
Sbjct: 472 KEVILFPTLRRRSD 485


>gi|209879756|ref|XP_002141318.1| aspartyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
 gi|209556924|gb|EEA06969.1| aspartyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
          Length = 537

 Score =  154 bits (389), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 74/346 (21%), Positives = 124/346 (35%), Gaps = 42/346 (12%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVRS 67
           L     G F+ L   +   R  G + F  +R  +    G+  V         +  KS+  
Sbjct: 82  LIPEIEGKFLWLRARIAESRCKGSLGFFLLRQSFFSVQGVANVNQGTKKDLLKWLKSLPI 141

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE----- 122
           E ++ I G V+       +++    ++E+   K   +S A +       +   PE     
Sbjct: 142 ESIVDIYGKVVIPEIPVSSSS---QRVEIIIHKAFCVSAASKELPFQLKDANRPEVDSHF 198

Query: 123 ----------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                      +R   R LDLR          +  +    R  +I   FIE  TP +   
Sbjct: 199 SDGNQIRVLQDVRLDNRVLDLRTFANQAIFRIQAMVCELFREFLIQNRFIEIHTPKILGG 258

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + EG            G    L Q+PQ YKQ+ +    DR F+I P FR E+  + R   
Sbjct: 259 ASEGGASVFTLKYF--GQPACLAQSPQLYKQMAICGDMDRVFEIGPVFRAENSNTHRHLC 316

Query: 233 EFYQLDMEMSFVEQD-DILNTMENVLRGVFE----------EFSNGNTVSNNF------L 275
           EF  LD+EM+      ++++ +E +   +F           E  + N     F       
Sbjct: 317 EFVGLDIEMTIKNSYIEVVDLLEELFIFIFNGINTRCQYELEVISNNYSFPPFKIPVNTP 376

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNV-TEHFVHSEFRVFSKILSV 320
           R+ +++          ++ N I   ++ TEH       V  K  S 
Sbjct: 377 RLTFEEGCNLLRESGVEIPNNIKEFDLSTEHEKLLGSIVKEKYNSD 422



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +      PF             D  +  +  YD    G EI SG  R H  + +++    
Sbjct: 428 RYPLKVRPFYTMPD------PADPENW-SNSYDFFMRGEEIISGAQRIHDYDFLMKRAEE 480

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+  E ++        +F+ G  PHGG   G++R+VML L   N+R  S+FP      +
Sbjct: 481 CGLVIESIKE----YIDSFKLGAFPHGGCGIGLERVVMLFLNLGNIRRSSMFPRDPKRLN 536

Query: 571 L 571
            
Sbjct: 537 P 537


>gi|256395047|ref|YP_003116611.1| tRNA synthetase class II (D K and N) [Catenulispora acidiphila DSM
           44928]
 gi|256361273|gb|ACU74770.1| tRNA synthetase class II (D K and N) [Catenulispora acidiphila DSM
           44928]
          Length = 430

 Score =  154 bits (389), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 81/313 (25%), Positives = 130/313 (41%), Gaps = 40/313 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            + VG  V++ GW+HR R    + FL +RD  G+TQ V     A  E  + +  E VL  
Sbjct: 11  PAHVGETVQVCGWLHRRRELKNVTFLILRDRSGLTQAVL--PGAVAEQLRDIPEETVLSF 68

Query: 74  DGLVMSRSAETINANIITGQIELSAQ----KIEILSV-AEELPLPVFGEREYPESIRFKY 128
            G V +            G +E+ A     ++E+LS  AE  PL ++     P       
Sbjct: 69  VGTVTAN-------EQAPGGVEVVAPASGPQVELLSTPAETPPLDIY----RPSVTASLP 117

Query: 129 RFLD-----LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
             LD     LR   L+         I   R  + A NF E  TP +  S+ E   +    
Sbjct: 118 TILDGAPVALRHPLLNAPFQITAASIAGFRTALDALNFTEIHTPKIVGSATESGANVFAL 177

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++ A  Q+PQ +KQ  M   F+R ++  P FR E   + R   ++  LD E+ F
Sbjct: 178 DWFGRKAYLA--QSPQFFKQ-AMVGVFERVYETGPVFRAEPSDTARHLAQYTSLDAELGF 234

Query: 244 V-EQDDILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYGTDK 290
           + +  D++  +   L G+    +               TV +    I + DA++  G D+
Sbjct: 235 ITDHRDVMAVVREALAGMVTTVAERAPAAVDLLGVKLPTVPDQIPEIHFADAMKMLGEDE 294

Query: 291 PDLRNPIIMHNVT 303
           PDL  P    +++
Sbjct: 295 PDLS-PANERDLS 306



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 55/134 (41%), Gaps = 26/134 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
           EF ++  +P                PF T  Q    +          +  +DL+  G E+
Sbjct: 316 EFLFVTGYPM------------TKRPFYTHAQPDRPNY---------SNSFDLIFRGLEL 354

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
            +GG R H  E  + A +  G      E    G    F+ GMPPHGG A G++R  M L 
Sbjct: 355 ITGGQRLHRYEDYIAALTARGEPTNAYE----GYLANFKHGMPPHGGFALGLERWTMRLT 410

Query: 552 GAKNVREVSLFPMS 565
            A N+R  +LFP  
Sbjct: 411 EADNLRRTALFPRD 424


>gi|156033277|ref|XP_001585475.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154699117|gb|EDN98855.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 567

 Score =  154 bits (389), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 67/354 (18%), Positives = 125/354 (35%), Gaps = 33/354 (9%)

Query: 11  DLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           +LG     G  V++SG +HR+R      F+ + D YG  Q +   D      A +     
Sbjct: 148 ELGEGEKKGVRVKVSGRIHRLREQKQATFITLVDGYGHLQCILQGDLTKTYDALTFAQGT 207

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV----AEELPLPVFGEREYPESIR 125
            L + G +    A            EL     +++      A+ +   +  +++  ES  
Sbjct: 208 SLTLYGEMRKVPAGQ----SAPDDRELHVDYYKVIGRSPSDADAITNKISHQQDQWESSM 263

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR DT    +  R+ +  +         F + S P    +  EG         
Sbjct: 264 LDNRHLVLRGDTASSVMKVRSAVEWAFAKAYKEMYFTKISPPAFVQTQVEGGSTLFELDY 323

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             + ++  L Q+ Q Y +  + S     + I   FR E   + R   E+  ++ E+ F++
Sbjct: 324 YGEKTY--LTQSSQLYLETGIPS-LGNVYCIEKSFRAEKSLTRRHLSEYTHVEAELDFID 380

Query: 246 QDDILNTMENVLRGV-------------FEEFS-NGNTVSNNFLRICYDDAIRRYGTDKP 291
            +D+L+ +E ++  V              +E +      +  F R+ Y DAI       P
Sbjct: 381 FEDLLDHLEEMISTVIGTIMADPEIAGYIKELNPEFKAPARPFKRMRYSDAIDWLNAQDP 440

Query: 292 DLRNP-----IIMHNVTEHF--VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
            + N      +   ++ E      ++      +L+  P         K     R
Sbjct: 441 PILNEEGNPHVFGDDIAEAAERKMTDIINLPILLTHFPVEIKAFYMKKDPQDPR 494


>gi|321262629|ref|XP_003196033.1| aspartate-tRNA ligase [Cryptococcus gattii WM276]
 gi|317462508|gb|ADV24246.1| aspartate-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 566

 Score =  154 bits (388), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 67/278 (24%), Positives = 117/278 (42%), Gaps = 30/278 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHY----GITQVVANPDSA-----CFE 60
           +L    VG  V     +H +RP G  I+FL  R       G+       D         +
Sbjct: 101 ELSNGLVGQRVVFRARLHNMRPQGAKIVFLTFRQQTHTLQGVLVASKEGDEHQVSKQMLK 160

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSA--QKIEI----LSVAEELPLPV 114
            A  + SE ++ ++G+V    AE  +  I   ++ +      +E+     S+ +      
Sbjct: 161 YATLIPSEAIVLVEGVVKE--AEVKSCTIQNYEVGIQKIFTAVEVNELPFSIDDAARPES 218

Query: 115 FGEREYPESI---------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
             +R   E +         R   R +DLR  T       ++ +    R  + +E FIE  
Sbjct: 219 DFQRMETEDVQFARVALPTRLDNRVMDLRTPTNQAIFRIQSAVCQLFREHLNSEGFIEIH 278

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           +P L  ++ E           ++ +F A  Q+PQ  KQ+ +A   +R ++IAP FR ED 
Sbjct: 279 SPKLQGAATESGASVFKVKYFDREAFLA--QSPQLAKQMAIAGDMERVYEIAPVFRAEDS 336

Query: 226 RSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFE 262
            + R   EF  LD+EM+  E   + ++ ++N+L  +F 
Sbjct: 337 NTHRHMTEFMGLDLEMAIEEHYHEAVDVLDNMLIHIFR 374



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 52/122 (42%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   A  PF TMP     +L         +  YD    G EI SG  R H    +++   
Sbjct: 458 KFPLAIRPFYTMPDPVDPTL---------SNSYDFFMRGEEILSGAQRIHDPTFLVERMK 508

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           +VGI    +     G   AF+ G PPH G   G++R+VML L   N+R  SLFP      
Sbjct: 509 DVGIDPASM----TGYLDAFKLGAPPHAGGGIGLERVVMLFLKLGNIRRASLFPRDPKRL 564

Query: 570 DL 571
             
Sbjct: 565 AP 566


>gi|302821721|ref|XP_002992522.1| hypothetical protein SELMODRAFT_186810 [Selaginella moellendorffii]
 gi|302821723|ref|XP_002992523.1| hypothetical protein SELMODRAFT_186810 [Selaginella moellendorffii]
 gi|300139724|gb|EFJ06460.1| hypothetical protein SELMODRAFT_186810 [Selaginella moellendorffii]
 gi|300139725|gb|EFJ06461.1| hypothetical protein SELMODRAFT_186810 [Selaginella moellendorffii]
          Length = 536

 Score =  154 bits (388), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 91/587 (15%), Positives = 170/587 (28%), Gaps = 137/587 (23%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           + V L+G V   R  G  ++F  +    G  Q V++  S       +V +       G V
Sbjct: 54  TTVSLAGRVMSKRASGSKLVFYSLESAEGTIQAVSDARSLVGGNFAAVHANIK---RGDV 110

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------------------ 119
           +  S     +N   G++ +  ++I +L+    +       R+                  
Sbjct: 111 VGVSGNPGMSN--RGELSIFVKEIILLAPCLYMLPKGGKNRDEQATWRPGKPRNPNAYVL 168

Query: 120 YPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
             +  R++ RFLD+  +   K ++      +N +R  +    F E  T IL + +   A 
Sbjct: 169 KEQETRYRLRFLDIIVNPEVKFVLETAHSAVNYIRSFLDQRGFREVETAILNSKAGGAAA 228

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                         +L  AP+   + L+ +G++  +++   FR+E               
Sbjct: 229 RPFNTHHDASEMDMSLRIAPELQLKQLLVAGYNGVYEVDKQFRNEG-------------- 274

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
                      ++   N                         +    Y +D  DL   + 
Sbjct: 275 -----------MDLTHN-------------------PEFTTCEFYSAY-SDYHDL---MT 300

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           M             + S ++    G    +  + G        D    + R +   GL  
Sbjct: 301 MTE----------ELLSGLVKKITGGYTVSYHSNGYDSPPVEIDFTPPFRRIEMVNGL-- 348

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARN 418
                     +    P  K L          +     G         PL           
Sbjct: 349 -------EDTMGIELP--KDLASEEANEFLKKTCEARG----VYCAPPLTTSRLLDKL-- 393

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +   L      C    +I+D                 +P  M     +           
Sbjct: 394 -VGHYL---EETCVNPAFIID-----------------HPLIMSPLAKQHRSKP----GL 428

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++L  N  E+ +     +        F      ++  ++          +A + G+P
Sbjct: 429 TERFELFVNKHELVNAYTELNNPVEQRDRFVQQLKDRQGGDDEAMVLDEDFVKAMEYGLP 488

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
           P  G   GIDR+VMLL  + N++EV L           M  P  V  
Sbjct: 489 PCAGWGMGIDRLVMLLTDSLNIKEVLL--------CPAMKPPEAVPP 527


>gi|240168025|ref|ZP_04746684.1| lysyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 1103

 Score =  154 bits (388), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 58/257 (22%), Positives = 111/257 (43%), Gaps = 10/257 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           R  +H+      +D  + + +SG + RVR +GG++F  +RD  G  Q++   D++C +  
Sbjct: 647 RSPSHTVAQAMGADDKATLSVSGRILRVRHYGGVLFAHLRDWTGEMQLLL--DNSCLQQG 704

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
           ++      + +  LV          +   G   L      ++      PLP   +     
Sbjct: 705 RAADFNATIDLGDLVEMTG---HMGSSKRGTRSLIVSSWRLIGKCLR-PLPNKWKGLTDP 760

Query: 123 SIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDF 180
             R + R++DL  +   ++++  R+ ++ S+R  + A+ FIE  TPIL        AR F
Sbjct: 761 EARVRTRYVDLAVNAESRDLLTARSTVLRSVRETLFAKGFIEVETPILQQVHGGAAARPF 820

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +          + L  AP+ Y + L   G +R F++   FR+E       P EF  L+  
Sbjct: 821 VTHINSYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLEAY 878

Query: 241 MSFVEQDDILNTMENVL 257
            +  +    L++   ++
Sbjct: 879 QAHADYLVWLDSCRELI 895



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 61/188 (32%), Gaps = 28/188 (14%)

Query: 380  NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
            +    E I V  ++         A  P +    A      + + L  +        + +D
Sbjct: 935  SEALGEHIHVDTNLATLRRLSDAAHIPYRAQWDAGAVVLELYEHL--VESRTERPTFYID 992

Query: 440  FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
            FP             + +P T P                A ++DLV  G E+ +      
Sbjct: 993  FP------------TSVSPLTRPHRSKL---------GVAERWDLVAWGIELGTAYSELT 1031

Query: 500  MSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                  +      +                 +A +  MPP GG+  G+DR+VML+ G  +
Sbjct: 1032 DPVEQRRRLHEQSLLAAGGDPEAMQLDEDFLQALEYAMPPTGGLGMGVDRVVMLITGR-S 1090

Query: 556  VREVSLFP 563
            +RE   FP
Sbjct: 1091 IRETLPFP 1098


>gi|170029945|ref|XP_001842851.1| asparaginyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167865311|gb|EDS28694.1| asparaginyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 436

 Score =  154 bits (388), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 58/309 (18%), Positives = 108/309 (34%), Gaps = 47/309 (15%)

Query: 24  SGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAE 83
            GWV  VR     +FLD+ D      +            +       + + G +      
Sbjct: 9   RGWVKSVRKMKDNVFLDVNDGTCGHNLQLVVSKP---QLQDTAYGSSVDVTGTLGRTPKN 65

Query: 84  TINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
                    Q+EL    ++ L         P + ++ YP      +  L  +  ++   +
Sbjct: 66  ---------QLELKVDSLQELGACPLAEGYPFYPKKSYPPDYIRNHLHLRPQVSSVGSTL 116

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL-------- 194
             R +        +  E FI+  TPI+T++  EGA +       N G    +        
Sbjct: 117 RVRHQATKCFNDYLDREGFIQIHTPIITSNDCEGAGEAFQVRPANDGLLKQMAKKGGPAR 176

Query: 195 ----PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD-I 249
                    Q     MA G  + +   P FR E+ +S     EF+ L++E +F++  D +
Sbjct: 177 PGTFLTVSGQLHLEAMAHGLGKVYTFGPTFRAENSKSPIHLAEFHMLELEEAFMDSLDAL 236

Query: 250 LNTMENVLRGVFEEFSN---------------------GNTVSNNFLRICYDDAIRRYGT 288
            + +E++++ V +                            V   F RI +DDA++    
Sbjct: 237 ADRIESMVKCVTKSLLENSSEDLSSVRKLTTDSNLEQSFTWVDKQFPRITFDDAMQVLQQ 296

Query: 289 DKPDLRNPI 297
            K  L++P+
Sbjct: 297 HKTKLKSPV 305



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 28/148 (18%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           QEL +++ +     ++  +P        K I      F M +         +   + A  
Sbjct: 315 QELFLVD-HFASPLFVTSWP--------KAIKS----FYMKENA------ANPELVDALD 355

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           + LV +  E+  G +R    + +         +K       G      + G  P  G   
Sbjct: 356 F-LVPHAGELVGGSVREGDHDKLA--------AKLPDREALGWYLELRKFGSVPTAGFGL 406

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G++R +  +L   NV++V  FP   + C
Sbjct: 407 GLERYLAWVLNVHNVKDVIPFPRWAHNC 434


>gi|328769085|gb|EGF79130.1| hypothetical protein BATDEDRAFT_90127 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 508

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 59/293 (20%), Positives = 102/293 (34%), Gaps = 17/293 (5%)

Query: 12  LGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           L  S   + V   G +   R     +IFL I    GI                    + +
Sbjct: 43  LDESHTSAIV---GRIVLRRDASKNLIFLVIE-RDGIQVQAVMNKQHWPSTFGENHFQIL 98

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               GL      + +     +GQ+ + A  +++LS       P        E+IR++ R+
Sbjct: 99  SGAIGLGDIIYVKGVPGRTKSGQLSIRATCLKMLSPCL-HIYPKKHVLLEDENIRYRQRY 157

Query: 131 LD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LD L   +     +KR++II ++R       F+E  TP+L+  +                
Sbjct: 158 LDMLVHRSTVDLFLKRSKIIRTIRSFFDTREFVEIETPVLSLMAGGANAKPFTTRMDVMN 217

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               +  AP+ Y + L+  G DR ++I   FR+E       P EF   +  M++   D  
Sbjct: 218 LDLQMRIAPELYLKQLVIGGIDRVYEIGKQFRNEGIDKTHNP-EFTTCEFYMAYGTFDQA 276

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           +   EN+ R V  + +    V                   + D   P     +
Sbjct: 277 MELTENLFRDVATKVNGSTIVE---------WETADGQIHQIDFSQPFKRIEI 320


>gi|167376054|ref|XP_001733836.1| asparaginyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165904855|gb|EDR29988.1| asparaginyl-tRNA synthetase, cytoplasmic, putative [Entamoeba
           dispar SAW760]
          Length = 451

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 59/288 (20%), Positives = 119/288 (41%), Gaps = 20/288 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGI-TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V   GW + +R     +IF+++RD  G    V+   +    E  K +  E  L I G
Sbjct: 25  GKLVTFKGWAYHIRKARKTLIFVELRDGSGYCQCVIFGKELCDPEKIKLLTRECSLEITG 84

Query: 76  LVMSRSAETINANIIT-GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            + + + +     I     +E+   + +++  +  + L     ++     + + R + +R
Sbjct: 85  RLNAYAGKNHPPEIADILNLEMQVTEWKVVGES-PIDLENIINKDSSIPQKMQNRHIVIR 143

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +   + +  R+ I    R      +F E   P +  +  EG          N+ ++  L
Sbjct: 144 SEHTQQVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQCEGGSTLFKLQYFNEPAY--L 201

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y + ++AS   + F +   +R E  R+ R   E+  L+ E+ F+  +D+LN +E
Sbjct: 202 TQSSQLYLESVIAS-LGKSFCMLSSYRAEQSRTVRHLAEYLHLEAELPFISFEDLLNHLE 260

Query: 255 NVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYGTDK 290
           +++  V +               +    +  F R+ Y DAI+ Y  D 
Sbjct: 261 DLVCTVIDNVMAVHGDKIRKMNPHLKLPTRPFKRMTYADAIK-YCNDH 307



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 5/90 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G +R      ++ A+   G++     + +    +  + G  PHGG   
Sbjct: 366 DLLMPGVGEIVGGSMRIWDYNELMGAYKANGLNP----DPYYWYTQQRKYGSCPHGGYGL 421

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G++R+VM LLG  ++R+V L+P     C+ 
Sbjct: 422 GVERLVMWLLGEDHIRKVCLYPRYLERCEP 451


>gi|317132068|ref|YP_004091382.1| aspartyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315470047|gb|ADU26651.1| aspartyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 437

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 97/255 (38%), Gaps = 14/255 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
            G   R+ G+VH +R  G   FL +R      Q V NP  +        ++      +G 
Sbjct: 20  AGKNARIKGFVHNIRDMGEFSFLILRTGAYTLQCVYNPTYS--------KTPLDGLREGT 71

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYPESIRFKYRFLDLR 134
            +    E ++        EL      ++S   E       ++           +R L LR
Sbjct: 72  CIEVCGEAVDEPRAQNGFELHIVDFTVISSPAEEYPFAINKKYLNLNIDTNLDHRPLTLR 131

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
                     +  + +     M    F +  TP + ++  EG  +       +  +F  L
Sbjct: 132 NPRQRAIFKIQEAVADGFADFMRQNGFTQMHTPKIVSAGAEGGANIFHLDYFDTKAF--L 189

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTM 253
            Q+PQ YKQ +M   F+R F+IAP FR E   + R   E+  LD EM F+   +D++   
Sbjct: 190 NQSPQFYKQ-MMVGVFERVFEIAPVFRAEKHHTSRHLNEYVGLDFEMGFISGMEDVMAME 248

Query: 254 ENVLRGVFEEFSNGN 268
             +LR +F       
Sbjct: 249 TAMLRHLFAYVQAHC 263



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/139 (28%), Positives = 56/139 (40%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  +I  FP             A  PF            +      A  +DL+  G EI 
Sbjct: 323 DLVFITHFP------------AAKRPFYAM--------DDPTDERFALSFDLLFRGLEIT 362

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H     +     +G+        F     A + G+PPHGG+  G++R+VM L+G
Sbjct: 363 TGGQRIHDYNEQVDKMRRMGLDPAD----FASYLMAHKYGLPPHGGLGIGLERLVMKLMG 418

Query: 553 AKNVREVSLFPMSQNFCDL 571
            KNVRE SLFP        
Sbjct: 419 LKNVREASLFPRDTGRLQP 437


>gi|269794500|ref|YP_003313955.1| lysyl-tRNA synthetase (class II) [Sanguibacter keddieii DSM 10542]
 gi|269096685|gb|ACZ21121.1| lysyl-tRNA synthetase (class II) [Sanguibacter keddieii DSM 10542]
          Length = 1147

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 59/268 (22%), Positives = 104/268 (38%), Gaps = 29/268 (10%)

Query: 5   RTHSCGDLGV--SDVG---------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           R+ + G+       VG           V + G V R+R  GG++F  +R+     Q +  
Sbjct: 684 RSCTVGEARALAVQVGTSPETGPATEQVEVVGRVVRLRDLGGVLFAVLREGTDQVQAMLT 743

Query: 54  PDSACFEIA---KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
            D +  ++A   ++V     + + G V             +G+  +      + + A   
Sbjct: 744 ADGSA-DVALWRRAVDLGDQVGVSGTV---------TRSRSGEPTVQVTSWRMAAKALT- 792

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
           P P           R + R +DL  D    + +  R+  + SMR  ++  +F+E  TPIL
Sbjct: 793 PPPDKHRGLVDPETRLRLRHMDLALDDRAQQLLRARSAAVWSMRSTLVGRDFLEVETPIL 852

Query: 170 TA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   AR F           Y L  AP+ Y + LM  G  R F++   FR+E   S 
Sbjct: 853 QRIHGGANARPFTTHINAYDMDLY-LRIAPELYLKQLMVGGAGRVFELGRNFRNEGVDST 911

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENV 256
             P EF  ++   +F +   + +   ++
Sbjct: 912 HNP-EFTSVEAYEAFGDYLTMRDLTRDL 938



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 50/154 (32%), Gaps = 28/154 (18%)

Query: 414  ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                  +      +        + MDFP               +P T        L    
Sbjct: 1010 GALVTELYDRF--VEGQTERPTFYMDFP------------VETSPLTRQHRRDPRL---- 1051

Query: 474  LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAF 529
                 A ++DLV  G E+ +               +   I              G   A 
Sbjct: 1052 -----AERWDLVAFGAELGTAYSELVDPVEQRARLTQQSILAAAGDPEAMEVDEGFLSAL 1106

Query: 530  QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  MPP GG+  G+DR+VM+L+GA ++R+   FP
Sbjct: 1107 EFAMPPTGGLGIGVDRVVMMLVGA-SIRDTLTFP 1139


>gi|297607220|ref|NP_001059657.2| Os07g0485400 [Oryza sativa Japonica Group]
 gi|255677765|dbj|BAF21571.2| Os07g0485400 [Oryza sativa Japonica Group]
          Length = 553

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 59/364 (16%), Positives = 120/364 (32%), Gaps = 58/364 (15%)

Query: 3   RYRTHSCG-----DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPD 55
           R RT         D G + VG  + + GWV   R    + F+++ D   ++ +     PD
Sbjct: 79  RRRTRVADVKGGEDEGAAWVGKQLAVRGWVRTCRAQRTVTFVEVNDGSCLSNMQCVLTPD 138

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEI------------ 103
           +  ++   S+ +   + ++G++ S         +   +I ++   I              
Sbjct: 139 TEGYDQIDSITTGASVLVEGVIASSQGGKQKVELKVSKISVAVDNIIPGKHASSAFFWFH 198

Query: 104 ----LSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE 159
               +  ++    P+  +R            L  R +T       R  +  +        
Sbjct: 199 FFVQIGESDPTSFPIQKKR-ASREFLRTVAHLRPRTNTFGAVARVRNALAYATHKFFQDN 257

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQG-----------------------SFYALP- 195
            F+  ++PI+TAS  EGA +    + +                           F+  P 
Sbjct: 258 GFVWVASPIITASDCEGAGEQFYVTTLISNSAEGGSLVKDIPSTKDGRVDWSQDFFCKPA 317

Query: 196 --QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                 Q      A+     +   P FR E+  + R   EF+   +        + ++  
Sbjct: 318 FLTVSGQLNGETYATALSDVYTFGPTFRAENSNTSRHLAEFWVKYVLE---NCKEDMDFF 374

Query: 254 ENVL-RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSE 310
              + +G+ +  ++   V  NF+ + Y DAI      K     P+   +   +EH  +  
Sbjct: 375 NTWIEKGIIDRLNDV--VEKNFVHLSYSDAIELLVGSKKKFEFPVKWGLDLQSEHERYIT 432

Query: 311 FRVF 314
              F
Sbjct: 433 EVAF 436



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 4/102 (3%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    LV    E+  G  R    + +      + ++K    + +      
Sbjct: 455 MRENDDGKTVAAMDLLVPRVGELIGGSQREERLDYLEARLDELNLNK----DSYWWYLDL 510

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            + G  PH G   G +R+V    G  N+R+   FP      +
Sbjct: 511 RRYGSVPHAGFGLGFERLVQFATGMDNIRDTIPFPRVPGSAE 552


>gi|256370722|ref|YP_003108547.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009514|gb|ACU52874.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 463

 Score =  154 bits (388), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 58/277 (20%), Positives = 103/277 (37%), Gaps = 29/277 (10%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             +++ GWV   R +    F+ I D   I  +    +     + K +     + + G+++
Sbjct: 24  KEIKIKGWVKHFRYN---CFIIINDGSTINNLQIFIEKKFSSLVKKINIGISIEVIGVLV 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSV--AEELPLPVFGEREYPESIRFKYRFLDLRRD 136
               +  N       IE+ A KI+I+     EEL   +   + +      +  +L  R  
Sbjct: 81  LSQGKEQN-------IEIYANKIKIIGKFSPEELQKTILQPKTHSFKKLREQAYLRFRTS 133

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------- 189
                +  R  I  S+      +NFI  +TPI+T    EGA +    +  +         
Sbjct: 134 IFSSILRIRHNISFSIHKFFFKKNFIYINTPIITTYDSEGAGEMFRVTNFDLKKIPLNEK 193

Query: 190 -------SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+          Q +    ASG  + +   P FR E   + R   EF+ ++ 
Sbjct: 194 GELNNNLDFFGTSTYLTVSGQLQGEAAASGLGKIYTFGPTFRAEKSNTFRHLSEFWMIEP 253

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           EMSF +    +N  E +L+ V +   N +     FL 
Sbjct: 254 EMSFYKLVHNMNFAEKLLKYVIKFVINNSYEDLFFLE 290



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 14/120 (11%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSN 510
                 PF M          ND  ++ A   D++     EI  G  R     V+L+    
Sbjct: 356 YPLKIKPFYMR-------INNDNKTVAAM--DIIFPYIGEIIGGSQREERYNVLLKRILE 406

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           + ++ + +           + G  PH G   G +R++  +    N+++V  FP   N  D
Sbjct: 407 LNLNIKSLW----WYLNIRRFGSVPHSGFGLGFERLIQYITNIDNIKDVIPFPRYPNHAD 462


>gi|212539668|ref|XP_002149989.1| aspartyl-tRNA synthetase, cytoplasmic [Penicillium marneffei ATCC
           18224]
 gi|210067288|gb|EEA21380.1| aspartyl-tRNA synthetase, cytoplasmic [Penicillium marneffei ATCC
           18224]
          Length = 951

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 76/368 (20%), Positives = 139/368 (37%), Gaps = 33/368 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSA-----CFEIAKS 64
           D+    +G  V  +  +H +R     ++FL  R      Q V + +           A+ 
Sbjct: 137 DISTDLIGKEVTFTARLHIIRNISAKLVFLVFRQQLTTFQGVLHAEEGKKSLGMVHWAER 196

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE----------ELPLPV 114
           +R+  ++ + G++ S +   + +      IELS +++ ++   E          E+    
Sbjct: 197 LRTGTIVRVRGIMQSPAVPVLGSTYH--DIELSIEQLHVVVRREASVPFSVYEAEIRTEE 254

Query: 115 FGER-----EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                      P+  R   R LDLR  T       ++ + N  R  +    FIE  TP L
Sbjct: 255 EDHVEGRYSHIPDRTRLSNRILDLRTGTAQAIFRLQSAVGNLWRAALDERGFIEIHTPKL 314

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             S+ E        +   + +F A  Q+PQ  KQ+ +AS FDR ++I   FR E+  + R
Sbjct: 315 QGSATESGASVFQLNYFGRPAFLA--QSPQLAKQMAIASDFDRVYEIGAVFRAENSNTHR 372

Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVF-----EEFSNGNTVSNNFLRICYDDAI 283
              E+  LD+EM+  E   ++L T++ VLR +      +       V + F     D  +
Sbjct: 373 HLTEYTGLDIEMAIEEHYHEMLETIDAVLRNIITGIYSKYRREVEAVKHQFP--SEDVVL 430

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
                  P      ++++        E     + L       +  +  +  G +    D+
Sbjct: 431 AEKTPVIPFQEAVALLNDSGWRGEDGELIPADEDLHTRDEIRLGELVKEKYGTDYYIIDK 490

Query: 344 MNEWARSQ 351
               AR  
Sbjct: 491 FPVSARPF 498



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 53/135 (39%), Gaps = 18/135 (13%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   +  PF                S     +D+   G EI SGG R H   ++ +    
Sbjct: 490 KFPVSARPFYTMPD--------PYDSRYTNSFDMFVRGQEIVSGGQRIHDPTMLEENMKK 541

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           VGI    +E+        F+ G PPH G   G++R VMLLL   N+R  SLF        
Sbjct: 542 VGIDPSAMED----YLEGFRWGAPPHAGAGVGLERFVMLLLKLGNIRLASLFHRDPKSF- 596

Query: 571 LLMGSPSTVSVEQLR 585
                P+   V QLR
Sbjct: 597 -----PAKPPVLQLR 606


>gi|328861275|gb|EGG10379.1| hypothetical protein MELLADRAFT_51822 [Melampsora larici-populina
           98AG31]
          Length = 567

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 62/282 (21%), Positives = 111/282 (39%), Gaps = 23/282 (8%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            VR+ GW+HR+R   G+IFL +RD  G  Q V     A    A ++  E  + + G +++
Sbjct: 141 KVRVFGWIHRLRQQKGLIFLVLRDGTGFLQCVLTGKLAQTYDALTLTIESTVQLTGKIVA 200

Query: 80  RSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                          EL      I+  A  +          +         R L LR +T
Sbjct: 201 LPEG----KSAPDGHELQVDWWSIMGKAPGDSESFTNQISEDSGPDTLADRRHLVLRGET 256

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R+ ++++ R      + IE + P +  +  EG           + ++  L Q+
Sbjct: 257 ASSVLKVRSALLDAFRQSYAKLSLIEVTPPCMVQTQVEGGSTLFAFDYYGEKAY--LTQS 314

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y +  + S     F I   FR E  R+ R   E+  L+ E+ F+  +D+L+ +E ++
Sbjct: 315 SQLYLETCLPS-LGDCFCIQESFRAEKSRTRRHLSEYTHLEAELGFLTFEDLLSHIEELI 373

Query: 258 -------------RGVFEEFS-NGNTVSNNFLRICYDDAIRR 285
                        + + E  + +    S  F R+ Y +AI  
Sbjct: 374 CSTLDILLANPKVKALVETLNPDFKYPSRPFKRMDYQEAIAW 415



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+    EI  G +R    + +L+A+   GI        +       + G   HGG   G+
Sbjct: 484 LMPGVGEIVGGSMRMTGYDELLEAYRGAGIPA----EPYYWYTDQRKYGTCEHGGYGLGV 539

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R +  L+   +VRE SL+P   + C  
Sbjct: 540 ERFLAWLVKRPHVRECSLYPRYTSRCTP 567


>gi|124505695|ref|XP_001350961.1| aspartyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
 gi|23510604|emb|CAD48989.1| aspartyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
          Length = 626

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 66/281 (23%), Positives = 117/281 (41%), Gaps = 22/281 (7%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-----PDSACFEIAKSVRSEWVLCI 73
             + + G +H +R  G I F+ +R      Q + +      D    +   ++  E ++ I
Sbjct: 178 KKIWVRGRIHDIRSKGSIAFIILRHKLYSLQCILDIKNNNNDKNMMKWVSNLSLECIVDI 237

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA---EELPLPVFGEREYPESI------ 124
            G +        + NI     E+   KI  LS         L     +E  + I      
Sbjct: 238 YGEIKKPEIPIDSTNIK---YEIHINKIFCLSKTMKELPFLLKDANMKETNDEITIKVNQ 294

Query: 125 --RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R   R  DLR    +     ++ I +  R  ++  NF+E  TP L   S EG  +   
Sbjct: 295 DNRLNNRCFDLRTYANYSIFSLQSVICHIFRTFLLQHNFVEIHTPKLLGESSEGGANAFK 354

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            +  NQ  + A  Q+PQ YKQ+ + SGFD+ F++ P FR E+  + R   E+  LD+EM+
Sbjct: 355 INYFNQNGYLA--QSPQLYKQMCINSGFDKVFEVGPVFRAENSNTYRHLCEYVSLDIEMT 412

Query: 243 FV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           +  +  + ++  +++ + +F+E +N          I     
Sbjct: 413 YKFDYMENVHFYDSMFKHIFKELTNNEKNKTFIKTIKNQYP 453



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 26/169 (15%)

Query: 400 FFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF 459
            F+  + +       D    + + + + +   +    I++FP                 +
Sbjct: 481 LFLKEEDILTYDLTTDLEKELGKLIKLSHNTDY--YIIINFP-----------SSLRPFY 527

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
           TM +     +         +  YD    G EI SG  R    +++L+      +      
Sbjct: 528 TMYKEDDPKI---------SNSYDFFMRGEEILSGSQRISDMKLLLENIKLFNLDP---- 574

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           N+      +F     PH G   G++R++ML LG  N+R+ SLFP     
Sbjct: 575 NKLNFYIDSFAYSSYPHSGCGIGLERVLMLFLGLNNIRKTSLFPRDPKR 623


>gi|291463763|pdb|3M4P|A Chain A, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
           In Complex With Asparaginyl-Adenylate
 gi|291463764|pdb|3M4P|B Chain B, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
           In Complex With Asparaginyl-Adenylate
 gi|291463765|pdb|3M4P|C Chain C, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
           In Complex With Asparaginyl-Adenylate
 gi|291463766|pdb|3M4P|D Chain D, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
           In Complex With Asparaginyl-Adenylate
 gi|291463767|pdb|3M4Q|A Chain A, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
 gi|291463768|pdb|3M4Q|B Chain B, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
          Length = 456

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 59/288 (20%), Positives = 119/288 (41%), Gaps = 20/288 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGI-TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V   GW + +R     +IF+++RD  G    V+   +    E  K +  E  L I G
Sbjct: 30  GKLVTFKGWAYHIRKARKTLIFVELRDGSGYCQCVIFGKELCEPEKVKLLTRECSLEITG 89

Query: 76  LVMSRSAETINANIIT-GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            + + + +     I     +E+   + +++  +  + L     ++     + + R + +R
Sbjct: 90  RLNAYAGKNHPPEIADILNLEMQVTEWKVIGES-PIDLENIINKDSSIPQKMQNRHIVIR 148

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +   + +  R+ I    R      +F E   P +  +  EG          N+ ++  L
Sbjct: 149 SEHTQQVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQCEGGSTLFKLQYFNEPAY--L 206

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y + ++AS   + F +   +R E  R+ R   E+  L+ E+ F+  +D+LN +E
Sbjct: 207 TQSSQLYLESVIAS-LGKSFCMLSSYRAEQSRTVRHLAEYLHLEAELPFISFEDLLNHLE 265

Query: 255 NVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYGTDK 290
           +++  V +               +    +  F R+ Y DAI+ Y  D 
Sbjct: 266 DLVCTVIDNVMAVHGDKIRKMNPHLKLPTRPFKRMTYADAIK-YCNDH 312



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 5/90 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G +R    + ++ A+   G++     + +    +  + G  PHGG   
Sbjct: 371 DLLMPGVGEIVGGSMRIWNYDELMGAYKANGLNP----DPYYWYTQQRKYGSCPHGGYGL 426

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G++R+VM LLG  ++R+V L+P     C+ 
Sbjct: 427 GVERLVMWLLGEDHIRKVCLYPRYLERCEP 456


>gi|295669995|ref|XP_002795545.1| asparaginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226284630|gb|EEH40196.1| asparaginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 580

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 62/293 (21%), Positives = 113/293 (38%), Gaps = 26/293 (8%)

Query: 12  LGVSD---VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           L  SD    G+ VR+ G VH +R    +IF+ + D YG+ Q +   D        ++  E
Sbjct: 146 LRPSDGDTPGTRVRVVGRVHHLRSQKDMIFVTLSDGYGLLQCIFTGDLVKTYDMMTLTLE 205

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRF 126
             + I G + +   +    +      EL A    I+  A  ++  +     R+      +
Sbjct: 206 TSIAIHGEMRAVPPKNHAYDDR----ELHADFFTIIGRAAGDKEAITTRVARDSDPHTLY 261

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR +T    +  R   + + R     +  +E + P +  +  EG          
Sbjct: 262 DNRHLVLRGETSSSVMKVRAATLRAFRKAFEEKGMLEVTPPAMVQTQVEGGSTLFEFDYY 321

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            + +F  L Q+ Q Y +  + S     F + P FR E   + R   E+  ++ E+ F+  
Sbjct: 322 GEKAF--LTQSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEYTHVEAELDFISF 378

Query: 247 DDILNTMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRR 285
            D+L+ +E+++  V +                      S  F R+ Y +AI  
Sbjct: 379 TDLLDYLEDMICRVIDLVLSEPLIAQYVKNLNPTFTPPSRPFKRMKYAEAIEW 431



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 7/123 (5%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAF 508
            +  F  +  T  +        +D    ++   D++  G  EI  G +R    + ++ A+
Sbjct: 464 NRPIFLTHFPTEIKAFYMKKDPDDPRVTESV--DVLMPGVGEIVGGSMRMDDWDELMAAY 521

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
              G+        +       + G  PHGG   G++R +  + G   VRE  L+P     
Sbjct: 522 KREGMDPSP----YYWYTDQRKYGTSPHGGYGLGLERFLAWMCGRYTVRECCLYPRFTGR 577

Query: 569 CDL 571
           C  
Sbjct: 578 CTP 580


>gi|15828861|ref|NP_326221.1| lysyl-tRNA synthetase (lysine--tRNA ligase) (LysRS) [Mycoplasma
           pulmonis UAB CTIP]
 gi|14089804|emb|CAC13563.1| LYSYL-TRNA SYNTHETASE (LYSINE--TRNA LIGASE) (LYSRS) [Mycoplasma
           pulmonis]
          Length = 510

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 107/268 (39%), Gaps = 22/268 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           + +Y   S  +L    +   + ++G +   R      F+ I+D  G  Q+  +       
Sbjct: 64  VEKYNHFSKDELLEKQI--KLIIAGRILTQRGP----FIVIQDTNGKIQLYVDKKELEEQ 117

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E    +    ++ + G +M           + G++ +     ++L+             
Sbjct: 118 KETLALLDIGDIIYVKGTLM---------KTMKGELTIKVNFFDLLTKGLTPLAE-KYHG 167

Query: 119 EYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEG 176
                 R++ R+LDL  +   K     RT++I+ +R     +NF+E  TP+L +      
Sbjct: 168 LVDVEERYRKRYLDLISNPNIKEIFWTRTKVISKIRKFFDEQNFMEVETPMLHSILGGAN 227

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F         SF  L  A +   + L+  G DR ++I   FR+E   +   P EF  
Sbjct: 228 ARPFKTYHNSLSSSF-NLRIATELPLKKLLVGGIDRVYEIGRIFRNEGIDTTHNP-EFTS 285

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEF 264
           ++   ++   + ++   EN+++ + +E 
Sbjct: 286 IEFYQAYSNLEIMMEQTENLIKFIAKEL 313



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 72/218 (33%), Gaps = 16/218 (7%)

Query: 357 AYIFWRLDESGNVAGMGPVAKHLN-------IVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
           AY    +        +  +AK L         V  + +     +   D+        + F
Sbjct: 291 AYSNLEIMMEQTENLIKFIAKELGLSKIKNHDVEIDLLADFKKINMVDAV--SEATKVDF 348

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
            +   D    +A    +     F+   I++   +E   E+  I       T     +  L
Sbjct: 349 RNIDLDKAIEVAGRYKVKVEKYFKVGHIIN-ELFELLIEKTLIQPTF--VTGHPIEISPL 405

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
                      + +L  N  E A+     +      + F      KE             
Sbjct: 406 AATSEDERFTERAELFINTKEYANMFTELNDPLDQRRRFEAQLEEKESGNEEASEIDESF 465

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A + G+PP GG   GIDR+VMLL   +++REV LFP
Sbjct: 466 LSALEYGLPPAGGCGIGIDRLVMLLTEKESIREVILFP 503


>gi|326491949|dbj|BAJ98199.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 571

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 53/285 (18%), Positives = 108/285 (37%), Gaps = 38/285 (13%)

Query: 22  RLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
            L+G V   R     + F D+       QV+A   S+     +  +   V+    +V   
Sbjct: 89  SLAGRVMSKRVSSSKLFFYDLYGDGVKVQVMAGASSSEVAETEFYKCHSVVKRGDIVGIV 148

Query: 81  SAETINANIITGQIELSAQKIEILSVAE-------------------------ELPLPVF 115
                +     G++ + A+ + +LS                            +  +P  
Sbjct: 149 GYPGRSGR---GELSIFARNLILLSPCLHMLPNQRTGRCTTVAGKTTREKAGADCWVPGI 205

Query: 116 GER-----EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL 169
           G          +  R+  R+LDL  +   ++I + R++II+ +R  +   N +E  TP++
Sbjct: 206 GRNTEAYVLKDQETRYPQRYLDLMVNHQVRHIFRTRSKIISFIRKFLDERNLLEVETPMM 265

Query: 170 T-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
                   A+ F+          Y +  AP+ + + L+  G DR ++I   FR+E     
Sbjct: 266 NLIPGGASAKPFVTHHNELNMDQY-MRIAPELHLKELVVGGLDRVYEIGKEFRNEGFDLT 324

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
             P EF   +  M++ + +D++   E +L  +  E +    +  +
Sbjct: 325 HSP-EFTGCEFYMAYADYNDLMELTEIILSSMVMELTGSTKIKYH 368


>gi|295698422|ref|YP_003603077.1| asparaginyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157367|gb|ADD79812.1| asparaginyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 466

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 58/371 (15%), Positives = 128/371 (34%), Gaps = 30/371 (8%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           +G  ++++GWV   R    GI F+D  D   +  +         +I ++ R + +    G
Sbjct: 16  IGEKIKVTGWVKSRRDSKLGISFIDFYDGSCLKTLQVVVK---EKIIQNYRKKILSITTG 72

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +        +     + EL +  I+++   ++        +++      K   L  R 
Sbjct: 73  FSLEIIGNLSLSIGKEQKFELLSTDIKVVGNVKDPENYPISIKKHSFEYLRKVSHLRSRT 132

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
           + +      R+ +I  +   +    ++  STPI+T    E +      S ++        
Sbjct: 133 NIIGSISRIRSDLIYFIHSFLKENGYLLVSTPIITTVDTEKSSKMFCVSSLDLNNLPITK 192

Query: 190 --------SFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    F+          Q      A    + +   P FR E   + +   EF+ L+
Sbjct: 193 LGKIDFSKDFFGKKTFLTVSGQLNLEAYACSLSKVYSFGPTFRAEPSNTRKHLAEFWMLE 252

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-RICYDDAIRRYGTDKPDLRNPI 297
           +E SF++  +++   EN+L+ VF+           FL +    + ++R           +
Sbjct: 253 LEASFLDLSELIQLSENMLKYVFKNILENREEDLLFLSKKTGINILKRLEKFIISDIIQV 312

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
             H+V +     E  + SK++  +   +      +    N                 G+ 
Sbjct: 313 EFHDVIKILSRMENNLSSKLIEKDISEKQEKYLTEKYFNNSIII--------KNHPKGIK 364

Query: 358 YIFWRLDESGN 368
             + +L+E   
Sbjct: 365 PFYMKLNEDQK 375



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 38/108 (35%), Gaps = 12/108 (11%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           PF M     +    +  L        L+    EI  G  R    E +          K +
Sbjct: 365 PFYMKLNEDQKTVASMDL--------LIPPLGEIIGGSQR----EEIYSKICKNMKEKGI 412

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            +  +       + G  PH G   G +R+V    G KNVREV  FP +
Sbjct: 413 KKKNYEWYLDLRRYGTVPHSGFGLGFERLVAYTTGMKNVREVIPFPRT 460


>gi|209876658|ref|XP_002139771.1| asparaginyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
 gi|209555377|gb|EEA05422.1| asparaginyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
          Length = 518

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 70/410 (17%), Positives = 124/410 (30%), Gaps = 84/410 (20%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGI--TQVVANPDSACFEIAKSVR 66
           D GVS +G  V +SGW   VR      ++F+ + D       QVV    ++ F  A    
Sbjct: 34  DKGVSYIGQRVTISGWSRTVRKQCSDTLVFVVLNDGSTSRNIQVVVEQSASGFRDALKSS 93

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSA-----QKIEILSVAEELPLPVFGEREYP 121
                 I G ++   A+         ++EL        +I++L   +    P   ++ + 
Sbjct: 94  VGCSYRITGCIVKSPAKE-------QEVELLVSDSKEDEIKVLGFCDPSKYP-LAKKHHS 145

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +    +   L  R          R  +  ++        F    TPI+T++  EGA +  
Sbjct: 146 KEFLREIPHLRPRTQFFSSVTRIRNTLSIAIHDYFQYLGFYYIQTPIITSADCEGAGEMF 205

Query: 182 VPSRVNQG--------------------------------------SFY---ALPQAPQQ 200
             + +                                          F+          Q
Sbjct: 206 QVTTLLPHSNIISDIPTKKTGNLSTKINPESTDNHDKLDNMIDYNRDFFEVPTYLTVSGQ 265

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
                 +      +   P FR E+  + R   EF+ ++ EM+F +  D +N  E +L+  
Sbjct: 266 LNVENFSCSMSDVYTFGPTFRAENSHTGRHLAEFWMIEPEMAFADLLDDMNLGEGLLKYC 325

Query: 261 FEEFSNGNTVSNN---------------------FLRICYDDAIRRYGTDKPDLRNPII- 298
            E     N V                        F RI Y +AI            P+  
Sbjct: 326 VEAVLKNNEVDLQYLDANIEKGLINRLKQVVSEEFARISYTEAIEMLKPYNNKFTVPVEW 385

Query: 299 -MHNVTEHFVHSEFRVFSKI---LSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            M   +EH  +    +  K     +     + + +     G   A  D +
Sbjct: 386 GMDLGSEHEKYITDVLLKKPCILYNYPKDIKAFYMKQNDDGLTVAAMDIL 435



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +K ND     A    LV    E+  G  R    E +  A    G+    +E  +      
Sbjct: 420 MKQNDDGLTVAAMDILVPKIGEVIGGSQREDDIEKLKSAIIEKGM---ELEPYW-WYNEL 475

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              G  PH G   G +R+VM++ G  NVR+V  FP 
Sbjct: 476 RLYGSVPHAGFGLGFERLVMMVTGIDNVRDVIPFPR 511


>gi|67471183|ref|XP_651543.1| asparaginyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56468293|gb|EAL46156.1| asparaginyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 451

 Score =  153 bits (387), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 59/288 (20%), Positives = 119/288 (41%), Gaps = 20/288 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGI-TQVVANPDSACFEIAKSVRSEWVLCIDG 75
           G  V   GW + +R     +IF+++RD  G    V+   +    E  K +  E  L I G
Sbjct: 25  GKLVTFKGWAYHIRKARKTLIFVELRDGSGYCQCVIFGKELCEPEKVKLLTRECSLEITG 84

Query: 76  LVMSRSAETINANIIT-GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            + + + +     I     +E+   + +++  +  + L     ++     + + R + +R
Sbjct: 85  RLNAYAGKNHPPEIADILNLEMQVTEWKVIGES-PIDLENIINKDSSIPQKMQNRHIVIR 143

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +   + +  R+ I    R      +F E   P +  +  EG          N+ ++  L
Sbjct: 144 SEHTQQVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQCEGGSTLFKLQYFNEPAY--L 201

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y + ++AS   + F +   +R E  R+ R   E+  L+ E+ F+  +D+LN +E
Sbjct: 202 TQSSQLYLESVIAS-LGKSFCMLSSYRAEQSRTVRHLAEYLHLEAELPFISFEDLLNHLE 260

Query: 255 NVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYGTDK 290
           +++  V +               +    +  F R+ Y DAI+ Y  D 
Sbjct: 261 DLVCTVIDNVMAVHGDKIRKMNPHLKLPTRPFKRMTYADAIK-YCNDH 307



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 5/90 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G +R    + ++ A+   G++     + +    +  + G  PHGG   
Sbjct: 366 DLLMPGVGEIVGGSMRIWNYDELMGAYKANGLNP----DPYYWYTQQRKYGSCPHGGYGL 421

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G++R+VM LLG  ++R+V L+P     C+ 
Sbjct: 422 GVERLVMWLLGEDHIRKVCLYPRYLERCEP 451


>gi|295110405|emb|CBL24358.1| aspartyl-tRNA synthetase, archaeal type [Ruminococcus obeum A2-162]
          Length = 443

 Score =  153 bits (387), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 63/269 (23%), Positives = 106/269 (39%), Gaps = 14/269 (5%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           LG S +   V L G VH +R  G + F+ +R   G+ Q V   + A   +   ++    L
Sbjct: 19  LGTSLLNQEVILEGAVHSIRNMGDVAFVILRRREGLFQAVVENEKANLSV-HDLKEAMTL 77

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--VFGEREYPESIRFKYR 129
            + G++                 E+  +++EILS   E         +       +   R
Sbjct: 78  RVKGILNEEERAPHGR-------EIRIREVEILSAPAEPMPLAIDKWKLNTSLEAKLNLR 130

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            + LR          +  +  + R  +  + F E  TP + A   EG  +    S  ++ 
Sbjct: 131 PIALRNVQERSKFKIQEALTRAFRDFLYEQGFTEIHTPKIGARGAEGGANLFKFSYFHKP 190

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDD 248
           +  A  Q+PQ YKQ +M   FDR F+  P FR E   + R   E+  LD EM +++  +D
Sbjct: 191 AVLA--QSPQFYKQ-MMVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFED 247

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           I+      L+   +            L+I
Sbjct: 248 IMGMETGFLQYAMKLLKKDYAKELQILKI 276



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF       +              +DL+ +G E+ 
Sbjct: 329 DFVFVTHYP------------SKKRPFYAMDDPADDKF--------TLSFDLLFHGLEVT 368

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H    +    +  G+ ++ +E         F+ GMPPHGG+  G++R+ M LLG
Sbjct: 369 TGGQRIHDYNQLKAKIAARGMEEDGMEQ----YLDTFKHGMPPHGGLGIGLERLTMQLLG 424

Query: 553 AKNVREVSLFPMSQNFCDL 571
            +NVRE  LFP   N  + 
Sbjct: 425 EENVREACLFPRDLNRLEP 443


>gi|39932450|sp|Q98QH1|SYK1_MYCPU RecName: Full=Lysyl-tRNA synthetase 1; AltName: Full=Lysine--tRNA
           ligase 1; Short=LysRS 1
          Length = 491

 Score =  153 bits (387), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 107/268 (39%), Gaps = 22/268 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           + +Y   S  +L    +   + ++G +   R      F+ I+D  G  Q+  +       
Sbjct: 45  VEKYNHFSKDELLEKQI--KLIIAGRILTQRGP----FIVIQDTNGKIQLYVDKKELEEQ 98

Query: 60  -EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            E    +    ++ + G +M           + G++ +     ++L+             
Sbjct: 99  KETLALLDIGDIIYVKGTLM---------KTMKGELTIKVNFFDLLTKGLTPLAE-KYHG 148

Query: 119 EYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEG 176
                 R++ R+LDL  +   K     RT++I+ +R     +NF+E  TP+L +      
Sbjct: 149 LVDVEERYRKRYLDLISNPNIKEIFWTRTKVISKIRKFFDEQNFMEVETPMLHSILGGAN 208

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F         SF  L  A +   + L+  G DR ++I   FR+E   +   P EF  
Sbjct: 209 ARPFKTYHNSLSSSF-NLRIATELPLKKLLVGGIDRVYEIGRIFRNEGIDTTHNP-EFTS 266

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEF 264
           ++   ++   + ++   EN+++ + +E 
Sbjct: 267 IEFYQAYSNLEIMMEQTENLIKFIAKEL 294



 Score = 84.7 bits (208), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 72/218 (33%), Gaps = 16/218 (7%)

Query: 357 AYIFWRLDESGNVAGMGPVAKHLN-------IVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
           AY    +        +  +AK L         V  + +     +   D+        + F
Sbjct: 272 AYSNLEIMMEQTENLIKFIAKELGLSKIKNHDVEIDLLADFKKINMVDAV--SEATKVDF 329

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
            +   D    +A    +     F+   I++   +E   E+  I       T     +  L
Sbjct: 330 RNIDLDKAIEVAGRYKVKVEKYFKVGHIIN-ELFELLIEKTLIQPTF--VTGHPIEISPL 386

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
                      + +L  N  E A+     +      + F      KE             
Sbjct: 387 AATSEDERFTERAELFINTKEYANMFTELNDPLDQRRRFEAQLEEKESGNEEASEIDESF 446

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A + G+PP GG   GIDR+VMLL   +++REV LFP
Sbjct: 447 LSALEYGLPPAGGCGIGIDRLVMLLTEKESIREVILFP 484


>gi|164657151|ref|XP_001729702.1| hypothetical protein MGL_3246 [Malassezia globosa CBS 7966]
 gi|159103595|gb|EDP42488.1| hypothetical protein MGL_3246 [Malassezia globosa CBS 7966]
          Length = 518

 Score =  153 bits (387), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 75/372 (20%), Positives = 128/372 (34%), Gaps = 26/372 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
            R   C  +   DV   V++ GWVHR+R     +FL +RD  G  Q V          A 
Sbjct: 81  KRIKICAGVQNRDV--RVKVCGWVHRLRSQKDRMFLVLRDGTGYLQCVLQGALIQTYDAL 138

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYP 121
           ++  E  + + G++ +               EL       +  A   +  +         
Sbjct: 139 TLTLESSVELYGVIKTLPEG----KTAPDNHELVVDYWTCVGKAPGGDDAIMNRVSENAD 194

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
            SI    R L LR +T    +  R  +++  R    +   +E + P +  +  EG     
Sbjct: 195 PSILADNRHLVLRGETASAILRVRAAVLDGFRAEFASSGMLEVTPPCMVQTQVEGGATLF 254

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                 Q SF  L Q+ Q Y +  +       + +   FR E   + R   E+  L++E+
Sbjct: 255 QFDYYGQKSF--LTQSSQLYLETCLP-ALGDVYCVQESFRAEKSHTRRHLSEYTHLEIEL 311

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGN--------------TVSNNFLRICYDDAIRRYG 287
           +FV  DD+L+ +E  + G+ +     +                   FLR+ Y DAI    
Sbjct: 312 AFVSFDDLLSHIEQDICGMVDRVLKDDKTRALIEQLNPGFQPPKRPFLRLNYKDAIAYLN 371

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
                  +    H + +    +  R  +  L V      +    K     R   D     
Sbjct: 372 EHNITNEHG-EPHKIGDDIAEAAERKMTDQLGVPILLHSFPREIKAFYMKRVPGDEAFTE 430

Query: 348 ARSQGQPGLAYI 359
           +     PG+  I
Sbjct: 431 SVDLLMPGVGEI 442



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 5/98 (5%)

Query: 475 LSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                   DL+  G  EI  G +R    + +L A+   GI        +       + G 
Sbjct: 425 DEAFTESVDLLMPGVGEIVGGSMRMTGHDELLDAYKREGIDPSP----YYWYTEQRKYGT 480

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             HGG   G++R++  L     VRE SL+P     C  
Sbjct: 481 CEHGGYGLGVERLLAWLTNRWTVRECSLYPRWTGRCTP 518


>gi|157113775|ref|XP_001652096.1| aspartyl-tRNA synthetase [Aedes aegypti]
 gi|108877614|gb|EAT41839.1| aspartyl-tRNA synthetase [Aedes aegypti]
          Length = 553

 Score =  153 bits (387), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 59/287 (20%), Positives = 113/287 (39%), Gaps = 21/287 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G  +    V+++GWVHR+R  G  ++F+ +RD  G  Q V N        A  + +E  +
Sbjct: 125 GSENRDIRVKINGWVHRLRRQGKGLMFITLRDGTGFLQCVLNDLMCQTYNALVLSTESAV 184

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  EL     E++ +A           +    ++   R +
Sbjct: 185 QLFGTLKEVPEG----KSAPGGHELHVDYWELIGLAPAGGADTILNEDAHPDVQLDNRHI 240

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +   K +  R  I+++ R       + E + P L  +  EG       +   + ++
Sbjct: 241 MIRGENTSKILKMRDVIMDAFRAHYHDRGYTEVTPPTLVQTQVEGGSTLFKLNYFGEEAY 300

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  +       + IA  +R E  R+ R   E+  ++ E  F+  DD+L+
Sbjct: 301 --LTQSSQLYLETCLP-ALGDVYCIAQSYRAEQSRTRRHLAEYSHVEAECPFISFDDLLD 357

Query: 252 TMENV------------LRGVFEEFS-NGNTVSNNFLRICYDDAIRR 285
            +E++               + +E + +       F R+ Y DAI  
Sbjct: 358 RLEDLVVDVVDRVLKSPWGHIVKELNPDFVPPKTPFRRMNYADAIVW 404



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+   E +++ +   GI  +     +         G  PHGG   G+
Sbjct: 470 LLPNVGEIVGGSMRSWDHEELMEGYKREGIDPKP----YYWYIDQRVYGSQPHGGYGLGL 525

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  LL   ++REV L+P 
Sbjct: 526 ERFMCWLLNRYHIREVCLYPR 546


>gi|322695943|gb|EFY87743.1| putative lysyl-tRNA synthetase (lysine--tRNA ligase) [Metarhizium
           acridum CQMa 102]
          Length = 616

 Score =  153 bits (387), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 64/259 (24%), Positives = 106/259 (40%), Gaps = 14/259 (5%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEI---AKSVR 66
           D         V LSG V   R  G  +IFLDI + +   Q++ N +    E     +   
Sbjct: 114 DFDEQAPSEEVTLSGRVRSKRVVGKSLIFLDIVNEFQKVQIMVNKNKCVSEKHGRIQKFS 173

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIR 125
               L   G  +S +          G+  L A ++ E+LS +    +    E+      R
Sbjct: 174 LFKHLIQVGDHISVTG--NATRTKAGEPTLQAIQLPELLSPS----MEQIPEKLNDPKTR 227

Query: 126 FKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
              R +D L    +   +  R  I   MR    ++ F+E  TPIL  ++    AR F+  
Sbjct: 228 MADRHVDMLVNREVVDVLRLRAEITKYMRDHFHSKRFLEFQTPILAENAGGAVARPFVTQ 287

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +   +    AL  AP+ + + L+  G DR F+I P FR+E   +   P EF   +   ++
Sbjct: 288 ATEFRKKDLALRIAPELWLKRLVVGGVDRVFEIGPAFRNEGVDATHNP-EFTMCEFYSAY 346

Query: 244 VEQDDILNTMENVLRGVFE 262
               D++   E +L G+ +
Sbjct: 347 TNLADLIKETEELLHGLAK 365



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 42/134 (31%), Gaps = 29/134 (21%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG---- 512
           +P  M               + + + +L   G E+A+     +  E   +  +       
Sbjct: 464 HPVCMSPLAK-GFLCPKTYQLVSARAELFVGGRELANMYEEENDPEEQKRKLAFHRTLVN 522

Query: 513 -------------------ISKEVVENRFGG-----LYRAFQCGMPPHGGIAAGIDRIVM 548
                                +  ++   G        +A   G+PP GG   G++R+VM
Sbjct: 523 KPNGEVGFEEAAGEREPTLAEEAEMDEWEGSPLDQSYVKALDFGLPPTGGWGCGVERLVM 582

Query: 549 LLLGAKNVREVSLF 562
           L  GA  + +   F
Sbjct: 583 LFSGANRISDCLSF 596


>gi|262340904|ref|YP_003283759.1| asparagine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272241|gb|ACY40149.1| asparagine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 468

 Score =  153 bits (386), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 102/290 (35%), Gaps = 26/290 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           + +Y      D G   +   V + GW+   R     IF+ + D   I  +          
Sbjct: 2   IKKYSIKELLDKGKFFINKKVLVEGWIRSFRYS---IFITLNDGSTIRNLQIILSKKLEK 58

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV---FG 116
           EI K +     + + G++     +          IEL + +I I    +   L       
Sbjct: 59  EIQKKITIGSSIQVIGIITESIGK-------KQSIELQSLEITIYGSVDPSILQKSILQP 111

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           +R   E +R K   L  R +     +  R  +   +        F    TPI+T S+ EG
Sbjct: 112 KRHSFEKLR-KQAHLRFRTNIFSCIMRIRHHMAFCIHQYFHENGFFYLHTPIITTSNCEG 170

Query: 177 ARDFLVPSRVNQG--------SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           +      + ++           F+          Q +    A G  + +   P FR E+ 
Sbjct: 171 SGKMFQITTMDLKENSIDYTKDFFKCKTYLSVSGQLEAETAALGLGKVYTFGPVFRAENS 230

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            + R   EF+ ++ E++F   ++ +N  E+ L+ +     + N     FL
Sbjct: 231 NTSRHLSEFWMIEPEIAFFHLEENINLAEDFLKFIIRNVLDKNMEDLLFL 280



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L     E+  G  R    E++LQ   +    K    N+        + G  PH G   G 
Sbjct: 385 LFPEIGEVIGGSQREERYEILLQRIKDTNTDK----NKLWWYLDTRRFGSVPHSGFGLGF 440

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           DR+V  + G  N+R+V  FP + N
Sbjct: 441 DRLVQFITGMNNIRDVIPFPRTPN 464


>gi|266622513|ref|ZP_06115448.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288865768|gb|EFC98066.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 470

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 66/306 (21%), Positives = 115/306 (37%), Gaps = 36/306 (11%)

Query: 1   MHRYRTHSCGDLGVSD-VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF 59
           + R  T    DL   D  G  V L+G VH +R  G + F+ +R   G+ Q V       +
Sbjct: 7   IQRKETVELADLLSGDYTGKTVSLNGAVHTIRDMGEVSFVILRKAEGLVQCVRERSVPVY 66

Query: 60  EIAK--------------------------SVRSEWVLCIDGLVMSRSAETINANIITGQ 93
              +                           ++ E  + + G+V           I   +
Sbjct: 67  RAGERGAGAAQEAADGGLEFADNGPEIPSAELKEESAVTVTGIVSPEPRAPHGVEIRLTE 126

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
           I++ +   E+L +A         +       +   R + LR          +  I+   R
Sbjct: 127 IKVLSTPAEVLPIAVS-----KWKLNTSLETKLALRPITLRNPMERAKFRIQEGIVRGFR 181

Query: 154 CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
             + ++ F E  TP + A   EG  +       N+ +   L Q+PQ YKQ  M   +DR 
Sbjct: 182 DFLHSQGFTEIRTPKIVARGAEGGSNVFRLDYFNKKAE--LGQSPQFYKQ-TMVGVYDRV 238

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSN 272
           F+ AP FR E   + R   E+  LD EM +++  +D++    ++L+ V +  S       
Sbjct: 239 FEAAPVFRAEKHNTTRHLNEYTSLDFEMGYIDGFEDVMAMETSMLQYVMKLLSEEYEKEL 298

Query: 273 NFLRIC 278
             L++ 
Sbjct: 299 RMLKVT 304



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF            +D     +  +DL+  G EI 
Sbjct: 356 DFVFVTHYP------------SKKRPFYAMDD------PHDPKYTLS--FDLLFKGLEIT 395

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H  + +++     G+               F+ GMPPHGG+  G++R+ M LL 
Sbjct: 396 TGGQRIHDYDTIIKKMEKRGMDP----EELASYLMIFKYGMPPHGGLGIGLERLTMRLLD 451

Query: 553 AKNVREVSLFPMSQNFCDL 571
            +NVRE ++FP      + 
Sbjct: 452 EQNVRETTMFPRDVTRLEP 470


>gi|281206115|gb|EFA80304.1| aspartyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 566

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 76/388 (19%), Positives = 139/388 (35%), Gaps = 56/388 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN---PDSACFEIAKSVRSE 68
           +  S  G  V +   VH     G + F+ +RD     Q V +         + A ++  E
Sbjct: 87  INPSLNGEKVLVRARVHLATATGSLAFMVLRDAMHTIQAVLSAAGNGKPMVKFAGAIPKE 146

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG------------ 116
            ++ ++  V++              +EL    + I+S A++LPL +              
Sbjct: 147 SIVDMEATVITTKEPINRCTQK--DVELQVLSLFIVSEAQQLPLQLEDLARPTHELEQQK 204

Query: 117 -----------------------EREYPE---------SIRFKYRFLDLRRDTLHKNIVK 144
                                  E++  E           R   R LDLR  +       
Sbjct: 205 KTIEELDEKLKSLTLSEAERSDLEKKKGEANKYAEVLLDTRLNNRVLDLRVPSHQAIFRL 264

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           ++ +    R  + + NF+E  TP + +S+ E           +  ++ A  Q+PQ YKQ+
Sbjct: 265 QSAVGMLFREYLHSNNFVEIHTPKMISSASESGASVFKLGYFDTNAYLA--QSPQFYKQM 322

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEE 263
            + S  +R ++I P FR E+  + R   EF  LD+EMSF E   ++L+ ++N++  +FE 
Sbjct: 323 AICSDMERVYEIGPVFRAENSFTHRHLTEFVGLDIEMSFREHYHEVLDVLDNLMCSIFEG 382

Query: 264 FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
                      ++  Y     ++    P          + E        V    ++    
Sbjct: 383 LETRFAKELETIKAQYGYEPFKFTRPSPRFTFDEAAAMLNEI----GETVVDNDINTTQE 438

Query: 324 YEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
             +  I  K  G +    D+    AR  
Sbjct: 439 KLLGKIIKKKYGVDFYIIDKFYRTARPF 466



 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF         L         A  YDL   G EI SG  R H ++++ ++ + 
Sbjct: 458 KFYRTARPFYTMPDPNNELL--------ANAYDLFMRGEEICSGAQRIHDAKMLEESAAK 509

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI+   ++        AF+ G  PH G   G++R+VML LG  N+R+ S+FP       
Sbjct: 510 HGINIPSIQA----YIDAFKYGAAPHAGGGVGLERVVMLYLGIGNIRKTSMFPRDPKRIA 565

Query: 571 L 571
            
Sbjct: 566 P 566


>gi|294155503|ref|YP_003559887.1| asparagine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600455|gb|ADE19951.1| asparagine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 451

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 64/318 (20%), Positives = 120/318 (37%), Gaps = 30/318 (9%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            +  WV   R +  + F++I D   +   QVV       F +   +++   + + G + +
Sbjct: 21  TIKAWVDSNRGNNKLRFININDGSTVKNLQVVLKGKEFDFNLLDQIKNGAAIKVIGTLKA 80

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                         IEL A  IE+LS  E         +E       +   +  R  TL 
Sbjct: 81  TPD-------APQPIELVATSIELLSNTENDYPIQ--NQEINIETLREIPHVRHRTKTLR 131

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY-----AL 194
             ++ R+ +   +    +A +F   S+PI+T++  EGA +    S  +   F+     A 
Sbjct: 132 SAMLIRSTLAQEIHKYFMANDFYLMSSPIITSNDGEGAGEAFNVSDNSPEPFFGQNKKAT 191

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
                Q      A GF + +  AP FR E   + +   EF+ ++ E++F E +D++   +
Sbjct: 192 LGVTGQLHAESYAIGFKKVYTFAPTFRAEHSNTKKHAAEFWMVEPEVAFYELNDVVKLAD 251

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD--LRNPIIMHNVTEHFVHSEFR 312
           ++L+ V +                       Y  D  D  LRN + +   ++  V     
Sbjct: 252 HMLKTVIKATLAKCKFE------------FDYLEDHIDKNLRNRLALFTGSKLNVIDYAD 299

Query: 313 VFSKILSVNPGYEVWAIP 330
              ++  V   +E   I 
Sbjct: 300 AIKELAKVKSRFENQDIK 317



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 60/167 (35%), Gaps = 34/167 (20%)

Query: 401 FIAGDPLKFCSFAADARNHIAQELGIINCNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPF 459
           F   D       A +   ++A+EL       F     +++FP             +   F
Sbjct: 311 FENQDIKFGLDLATEHERYLAEEL-------FNGPVAVINFP------------KSFKAF 351

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVV 518
            M Q               A  +DL+  G  E+  G  R    + +L+    +GI +E +
Sbjct: 352 YMHQNED--------GKTVA-AFDLLVPGIGELIGGSQREVRYDKLLERIKEIGIDQEEI 402

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           +          + G     G   G +R+VM + G  N+R+V  +P +
Sbjct: 403 Q----WYLDLRKFGDSGSSGFGLGFERLVMYITGLDNIRDVIPYPRT 445


>gi|313608032|gb|EFR84120.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 365

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 28/240 (11%)

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           +  L + G +   +             E++   +E++S + + P+     +E+       
Sbjct: 1   QSSLFVTGTINEDTRSPF-------GYEMAVSGVEVISESHDYPITP---KEHGTEFLMD 50

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +R L LR +  H  +  R  II +       E F++   PILT S+PEG  +        
Sbjct: 51  HRHLWLRSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFE 110

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + +F  L Q+ Q Y +   A  F + F   P FR E  ++ R   EF+ ++ EM+F + +
Sbjct: 111 EDAF--LSQSGQLYMEAA-AMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLE 167

Query: 248 DILNTMENVLRGVFEEFSNGNTVSN---------------NFLRICYDDAIRRYGTDKPD 292
           D L   EN +  + +   +   +                  F RI Y +AI R      D
Sbjct: 168 DSLQVQENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIERLHELGFD 227



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 40/122 (32%), Gaps = 10/122 (8%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           +E          A  PF MP+             I    Y       EI  G  R H  E
Sbjct: 247 FEKPVFITHYPKAIKPFYMPEDPENDQVVLCADMIAPEGY------GEIIGGSERIHDLE 300

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +     +  +     +  +       + G  PH G   G++R V  + G ++VRE   F
Sbjct: 301 TLQARMEDFDLD----QEAYSWYLDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPF 356

Query: 563 PM 564
           P 
Sbjct: 357 PR 358


>gi|193217032|ref|YP_002000274.1| asparaginyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|226695299|sp|B3PNG8|SYN_MYCA5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|193002355|gb|ACF07570.1| asparaginyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 450

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 96/258 (37%), Gaps = 14/258 (5%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
               ++GWV   R +  I F+ + D   +   Q+V   D         +     +   G+
Sbjct: 19  QEFEVNGWVVSSRGNDKIRFVTLNDGSSVENLQLVLKEDEIKKVNVDHLSLGAAVYAKGV 78

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++                EL   ++EI+   +        ++E       +   L  R +
Sbjct: 79  LILTPE-------AKQPFELVVSELEIIGKVDNNFPIQ--KKETSLDFLREIPHLRHRTN 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY---A 193
                ++ R  +   +       +FI  S PI+T++  EGA + L+    ++  F+   A
Sbjct: 130 LFRAIMIIRATLAYEIHQFFNKNDFINISVPIITSNDGEGAGETLLVDDESKDYFFKQKA 189

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                 Q      A+GF   +  AP FR E+  + R   EF+ ++ EM+F    D +   
Sbjct: 190 FLGVTGQLHAEAYAAGFKNVYTFAPTFRAENSHTSRHLAEFWMIEPEMAFATLKDDIKIA 249

Query: 254 ENVLRGVFEEFSNGNTVS 271
           +++L+ V +         
Sbjct: 250 DSMLKTVIKNTIEKCPDE 267



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 5/84 (5%)

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           +DL+  G  E+  G  R    E ++   + + I     +          + G  P  G  
Sbjct: 364 FDLLVPGIGELIGGSQRESRYEKLVTRMAELNIP----QEPLQWYLDLRKYGYAPSSGFG 419

Query: 541 AGIDRIVMLLLGAKNVREVSLFPM 564
            G +R+VM + G  N+R+V  FP 
Sbjct: 420 LGFERLVMYVTGISNIRDVIPFPR 443


>gi|71893559|ref|YP_279005.1| lysyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 489

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/333 (16%), Positives = 120/333 (36%), Gaps = 26/333 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            +  +G + R R    IIF                 +    I  ++    ++ + G +  
Sbjct: 57  KIAFAGRLIRQRGPFFIIFSQNLQFQAYISKEFQKKNEF--IFANLDLGDIIEVSGYL-- 112

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                      TGQ+ +      +L+ +       +   E P+   ++ R+LDL  ++  
Sbjct: 113 -------FKTQTGQLSIKVNNFSLLTKSLHPLPDQYYGIENPDEK-YRKRYLDLLVNSES 164

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
               + R++II+ +R    ++ F+E  TP+L       +    +    +    + L  A 
Sbjct: 165 AKTFRLRSKIISLIRTFFDSQGFLEVDTPVLQPVLGGASAKPFITYYNSLSQNFYLRIAT 224

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L+ +GFDR ++I   FR+E   S   P EF  ++   ++   + I++  EN+ R
Sbjct: 225 ELPLKKLLVAGFDRVYEIGKIFRNEGFDSTHNP-EFTSIEFYQAYANLEKIMDQTENLFR 283

Query: 259 GVFEEF-SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
            +FE+   +      +  +I + +   RY            M  +T   ++ + +  +  
Sbjct: 284 FLFEKLNLDPANFDFSNKKINFLEKFARY-----------DMIEITSKLMNFDLKSANFA 332

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
             V    +                    ++   
Sbjct: 333 DLVEKAKKEGVKIEPFFKKGHLINKFFEKFVEP 365



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 4/92 (4%)

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMPPHGG 538
           +L   G E A+     +     L  F    I K    +          +A + GMPP GG
Sbjct: 398 ELFICGKEFANMFDELNDPIDQLSRFQAQIIEKNQGNQEASEIDNEFVQALEYGMPPAGG 457

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              GIDR+ MLL   +++REV LFP  +   D
Sbjct: 458 CGIGIDRLTMLLTKNESIREVILFPQLKPKKD 489


>gi|312601164|gb|ADQ90419.1| lysyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 488

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/333 (16%), Positives = 120/333 (36%), Gaps = 26/333 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            +  +G + R R    IIF                 +    I  ++    ++ + G +  
Sbjct: 56  KIAFAGRLIRQRGPFFIIFSQNLQFQAYISKEFQKKNEF--IFANLDLGDIIEVSGYL-- 111

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                      TGQ+ +      +L+ +       +   E P+   ++ R+LDL  ++  
Sbjct: 112 -------FKTQTGQLSIKVNNFSLLTKSLHPLPDQYYGIENPDEK-YRKRYLDLLVNSES 163

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
               + R++II+ +R    ++ F+E  TP+L       +    +    +    + L  A 
Sbjct: 164 AKTFRLRSKIISLIRTFFDSQGFLEVDTPVLQPVLGGASAKPFITYYNSLSQNFYLRIAT 223

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L+ +GFDR ++I   FR+E   S   P EF  ++   ++   + I++  EN+ R
Sbjct: 224 ELPLKKLLVAGFDRVYEIGKIFRNEGFDSTHNP-EFTSIEFYQAYANLEKIMDQTENLFR 282

Query: 259 GVFEEF-SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
            +FE+   +      +  +I + +   RY            M  +T   ++ + +  +  
Sbjct: 283 FLFEKLNLDPANFDFSNKKINFLEKFARY-----------DMIEITSKLMNFDLKSANFA 331

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
             V    +                    ++   
Sbjct: 332 DLVEKAKKEGVKIEPFFKKGHLINKFFEKFVEP 364



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 4/92 (4%)

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMPPHGG 538
           +L   G E A+     +     L  F    I K    +          +A + GMPP GG
Sbjct: 397 ELFICGKEFANMFDELNDPIDQLSRFQAQIIEKNQGNQEASEIDNEFVQALEYGMPPAGG 456

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              GIDR+ MLL   +++REV LFP  +   D
Sbjct: 457 CGIGIDRLTMLLTKNESIREVILFPQLKPKKD 488


>gi|166229888|sp|Q4AAC7|SYK_MYCHJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|144227509|gb|AAZ44294.2| lysyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 491

 Score =  153 bits (386), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/333 (16%), Positives = 120/333 (36%), Gaps = 26/333 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            +  +G + R R    IIF                 +    I  ++    ++ + G +  
Sbjct: 59  KIAFAGRLIRQRGPFFIIFSQNLQFQAYISKEFQKKNEF--IFANLDLGDIIEVSGYL-- 114

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                      TGQ+ +      +L+ +       +   E P+   ++ R+LDL  ++  
Sbjct: 115 -------FKTQTGQLSIKVNNFSLLTKSLHPLPDQYYGIENPDEK-YRKRYLDLLVNSES 166

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
               + R++II+ +R    ++ F+E  TP+L       +    +    +    + L  A 
Sbjct: 167 AKTFRLRSKIISLIRTFFDSQGFLEVDTPVLQPVLGGASAKPFITYYNSLSQNFYLRIAT 226

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L+ +GFDR ++I   FR+E   S   P EF  ++   ++   + I++  EN+ R
Sbjct: 227 ELPLKKLLVAGFDRVYEIGKIFRNEGFDSTHNP-EFTSIEFYQAYANLEKIMDQTENLFR 285

Query: 259 GVFEEF-SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
            +FE+   +      +  +I + +   RY            M  +T   ++ + +  +  
Sbjct: 286 FLFEKLNLDPANFDFSNKKINFLEKFARY-----------DMIEITSKLMNFDLKSANFA 334

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
             V    +                    ++   
Sbjct: 335 DLVEKAKKEGVKIEPFFKKGHLINKFFEKFVEP 367



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 4/92 (4%)

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMPPHGG 538
           +L   G E A+     +     L  F    I K    +          +A + GMPP GG
Sbjct: 400 ELFICGKEFANMFDELNDPIDQLSRFQAQIIEKNQGNQEASEIDNEFVQALEYGMPPAGG 459

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              GIDR+ MLL   +++REV LFP  +   D
Sbjct: 460 CGIGIDRLTMLLTKNESIREVILFPQLKPKKD 491


>gi|148377568|ref|YP_001256444.1| asparaginyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291614|emb|CAL59000.1| Asparaginyl tRNA synthetase [Mycoplasma agalactiae PG2]
          Length = 452

 Score =  152 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 56/266 (21%), Positives = 103/266 (38%), Gaps = 16/266 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
            + V L GWV   R +  I FL I D   +   Q     D   F++   VR    + + G
Sbjct: 18  DTDVVLRGWVVSNRGNNKIRFLTISDGSTVENIQATLKGDEFDFKLLDEVRIGAAVQVYG 77

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++               +E+ A K  +L   +        ++E       +   L  R 
Sbjct: 78  KIVLTPK-------AKQPLEILASKFVLLKNVDHDFPIQ--KQEINLETLREIPHLRHRT 128

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY--- 192
           + L   ++ R+ +   +        F+  S PI+T++  EGA +    +  N+   +   
Sbjct: 129 NLLRCVMLIRSTLALEIHKFFAENGFLNFSAPIITSNDGEGAGEQFYVNDGNKEQPFFGN 188

Query: 193 --ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
             A      Q      A GF+R +  AP FR E   + +   EF+ ++ E++F +   I+
Sbjct: 189 NNATLGVTGQLHAESYAIGFERVYTFAPTFRAEHSNTKKHAAEFWMIEPEVAFYDLKKII 248

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLR 276
           N    +L+ V +   N +     +L+
Sbjct: 249 NLANKLLKNVIKNTINKHPREFEYLQ 274



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 79/210 (37%), Gaps = 37/210 (17%)

Query: 358 YIFWRLDESGNVAGMGPVAKHLNI-VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           Y+   +D S        + K L I    +A+     ++D     F   D      FA + 
Sbjct: 272 YLQNNVDSSLLERLNSFIKKKLMILDYKDALVELEKVKD----KFENKDIKFGLDFATEH 327

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             ++A+E+            I++FP             +   F M Q        ND  +
Sbjct: 328 EKYLAEEI------AHGPIAIINFP------------KSFKAFYMHQ-------NNDNQT 362

Query: 477 IKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           + A  +DL+  G  E+  G  R      +L+    VGISKE ++          + G   
Sbjct: 363 VAA--FDLLVPGIGELIGGSQREARYGRLLERALEVGISKEELQ----WYLDLRRFGHSG 416

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             G   G +R+VM + G  N+R+V  +P +
Sbjct: 417 SAGFGIGFERLVMYVTGVDNIRDVIPYPRT 446


>gi|115752517|ref|XP_784585.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115955526|ref|XP_001181152.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 431

 Score =  152 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 90/258 (34%), Gaps = 16/258 (6%)

Query: 26  WVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETI 85
           W+  +R H G+ FLD+ D      +                    + + G ++   ++  
Sbjct: 2   WIRGLRQHKGVTFLDVNDGSCAQDLQVVVKPQTVHNNSEFTFGGAIEVKGQIVKSQSKGQ 61

Query: 86  NANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKR 145
                   IEL A  I +    E    P   +  +P     +Y  L  R       +  R
Sbjct: 62  P-------IELLASSIHVTGACEAEAYPFKAKVRHPLKYTRQYPHLRSRTPINGALMRVR 114

Query: 146 TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP-----SRVNQGSFYALPQ---A 197
           +    ++      E ++   TP+LT+S  EG  +          + +   F+  P     
Sbjct: 115 SSATLAVHNFFQDEGYVNVHTPVLTSSDCEGGGNLFRVQPSDDEKDDDDHFFGTPVYLLV 174

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENV 256
             Q +   +A    + +   P FR E+ R+ R   EFY ++ E++F     D+   ME  
Sbjct: 175 SGQLQLETIACSHTKAYTFGPTFRAENSRTRRHLAEFYMVEGEIAFTKSLQDVTEVMEQF 234

Query: 257 LRGVFEEFSNGNTVSNNF 274
           ++ V        +    F
Sbjct: 235 VKSVASAVYTKCSEDVQF 252



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 28/156 (17%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            H   E  +++       +++D+P        K I     PF   Q G +          
Sbjct: 303 LHSEHETFLVHHCGNVPVFVVDYP--------KDIK----PFYARQNGDDK--------- 341

Query: 478 KAFQYDL-VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
            A   DL V    E+  G +R    +V+ +   + G+     ++ +       + G  PH
Sbjct: 342 TAAAVDLLVPRIGELIGGSLREERLDVLQRRIQHSGL-----QDDYQWYLELRRFGTVPH 396

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
           GG   G +R++  LLG  ++R+V  FP       LL
Sbjct: 397 GGFGLGFERLLQFLLGVDHIRDVIPFPRFP-GSCLL 431


>gi|47208665|emb|CAF88672.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 533

 Score =  152 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 85/218 (38%), Gaps = 8/218 (3%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++F+ +RD  G  Q V +        A  + +E  + + G 
Sbjct: 103 GQRVKVFGWVHRLRRQGKNLMFIVLRDGTGFLQCVLSDKLCQCYNALVLSTESTVALYGT 162

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V              G  EL     E++ +A           +    ++   R + +R +
Sbjct: 163 VTPVPEG----KQAPGGHELHCDFWELIGLAPAGGADNLLNEDSDVDVQLNNRHMLIRGE 218

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            + K +  R+ +    R    +  + E + P L  +  EG       +   + ++  L Q
Sbjct: 219 NVSKILRVRSTVTQCFRDHFFSRGYYEIAPPTLVQTQVEGGSTLFSLNYFGEQAY--LTQ 276

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           + Q Y +  +       F IA  +R E  R+ R   EF
Sbjct: 277 SSQLYLETCIP-ALGDTFCIAQSYRAEQSRTRRHLSEF 313



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
           + + P L  +  EG       +   + ++  L Q+ Q Y +  +       F IA  +R 
Sbjct: 363 QIAPPTLVQTQVEGGSTLFSLNYFGEQAY--LTQSSQLYLETCIP-ALGDTFCIAQSYRA 419

Query: 223 EDPRSDRLPGE 233
           E  R+ R   E
Sbjct: 420 EQSRTRRHLSE 430


>gi|115396750|ref|XP_001214014.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114193583|gb|EAU35283.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 909

 Score =  152 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 76/368 (20%), Positives = 143/368 (38%), Gaps = 27/368 (7%)

Query: 3   RYRTHSCGDLGVS-------DVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP 54
           + RT S G+L  S        VG+ +  +  +H VR     ++FL  R      Q V + 
Sbjct: 127 QSRTRS-GELRTSFDTISKDMVGTEIFFTARLHVVRRMSAKLVFLVFRQQLVTFQGVLHE 185

Query: 55  DS-----ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
           +      A  + A+ +R   +L + G + +    T    +       S  + EI S  EE
Sbjct: 186 EPGVKSIAMVQWAEHLRIGSILQVRGTIRAPQLSTREEPVP-----FSVYEAEIRSPEEE 240

Query: 110 LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                      P+ +R   R LDLR  T       ++ + N  R  +  + FIE  TP L
Sbjct: 241 RVEGRRSH--IPDRVRLANRLLDLRTPTSQSIFRIQSAVGNLFRTALDEQGFIEIHTPKL 298

Query: 170 TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDR 229
             S+ E        +   + +F A  Q+PQ  KQ+ +A+ F R ++I   FR E+  + R
Sbjct: 299 QGSATESGASVFSVNYFGRDAFLA--QSPQLAKQMAIAADFGRVYEIGAVFRAENSNTHR 356

Query: 230 LPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
              E+  LD+EM+  E   ++L+ ++ V++ + +            ++  +      +  
Sbjct: 357 HLTEYTGLDIEMAIEEHYHEMLDVLDAVIKNILQGVYGRYRREVEIIKQQFPSEDVVWLE 416

Query: 289 DKPDLRNPIIMHNVTEH-FVHSEFRVF--SKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
             P +R    +  + +  +   +  +    + L       +  +  +  G +    D+  
Sbjct: 417 KTPIIRFADGIKMLNDSGWRDEDGNLLPEDEDLHTRDEIRLGELVKEKYGTDYYIIDKFP 476

Query: 346 EWARSQGQ 353
             AR    
Sbjct: 477 VGARPFYA 484



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 53/127 (41%), Gaps = 15/127 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF       +S   N         +D+   G EI SGG R H   ++ +    
Sbjct: 474 KFPVGARPFYAMPDPDDSRFTN--------SFDIFIRGQEIVSGGQRIHDPRMLEENMRR 525

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF---PMSQN 567
            GI+ + +E         F+ G PPH G   G++R+VMLLL   N+R  SLF   P S  
Sbjct: 526 NGINPDSMEE----YMEGFEWGAPPHAGAGVGLERLVMLLLKLGNIRLASLFHRDPKSFP 581

Query: 568 FCDLLMG 574
               ++ 
Sbjct: 582 AKPPMLQ 588


>gi|328950741|ref|YP_004368076.1| Asparaginyl-tRNA synthetase [Marinithermus hydrothermalis DSM
           14884]
 gi|328451065|gb|AEB11966.1| Asparaginyl-tRNA synthetase [Marinithermus hydrothermalis DSM
           14884]
          Length = 439

 Score =  152 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/257 (22%), Positives = 96/257 (37%), Gaps = 14/257 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCID 74
           G  V L  W+   R  G I FL +RD  G  Q        D   FE A  +  E  L + 
Sbjct: 14  GQEVLLRAWLVNRRSKGKIHFLILRDGTGFLQATVFKGEVDEETFERADHLPQETALEVR 73

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           GLV + +          G  E++ + + ++             +E+        R L LR
Sbjct: 74  GLVKADAR-------APGGYEIAVRGLRVIHT--PTEEYPITPKEHGIEFLMDRRHLWLR 124

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
                  +  R  I  ++   +    FI    PILT ++ EG  D      +  G    L
Sbjct: 125 HRRPWAVLRIRDEIERAIHDFLHERGFIRFDAPILTPNAVEGTTDLFEVE-LFDGDKAYL 183

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y     A  F R +   P FR E  ++ R   EF+ ++ E++F+  ++ +   E
Sbjct: 184 SQSGQLY-AEAGALAFGRVYTFGPTFRAERSKTRRHLLEFWMVEPEVAFMTHEENMQLQE 242

Query: 255 NVLRGVFEEFSNGNTVS 271
           +++  +           
Sbjct: 243 DLVSYLVGRVLENRRTE 259



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 39/112 (34%), Gaps = 10/112 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A   F M     +     +   +    Y       EI  G  R H  E++ +    
Sbjct: 329 KYPAAVKAFYMEPDDADPRLVKNNDMLAPEGY------GEIIGGSERIHDPELLRRKIRE 382

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             +     E+ F       + G  PH G   G++R V  + G ++VRE   F
Sbjct: 383 HNLP----ESVFDWYMDLRRFGSVPHAGFGIGLERTVAWICGLQHVREAVPF 430


>gi|261749579|ref|YP_003257265.1| asparaginyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497672|gb|ACX84122.1| asparaginyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 474

 Score =  152 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 103/295 (34%), Gaps = 29/295 (9%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF- 59
           + +Y      + G   +   V + GW+   R     IF+ + D   I  +          
Sbjct: 2   IEKYSIKELLEKGKKFLNKKVLVEGWIRSFRN---YIFITLNDGSTIKNLQIILSKNLEK 58

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE--LPLPVFGE 117
           E  K +     + + GL++    +          IEL + +I I    ++      +   
Sbjct: 59  EFLKKITIGSSIKVIGLIIESLGK-------KQSIELKSLEIRIYGEVDQKSFQKTILQP 111

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           +++      K   L  R +     +  R  +  S+        F   +TPI+T S+ EGA
Sbjct: 112 KKHSLETLRKQAHLRFRTNIFSSIMRVRHHVAFSIHKYFHEHGFFYINTPIITTSNAEGA 171

Query: 178 RDFLVPSRVNQG-------------SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFR 221
                 + ++                F+          Q +    +    + +   P FR
Sbjct: 172 GKMFQVTTMDLKNIPHIRENVDYTKDFFQCKTYLSVSGQLEAETASLALGKVYTFGPAFR 231

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            E+  + R   EF+ ++ EM+F   ++ ++  E+ L+ V +          +FL+
Sbjct: 232 AENSNTSRHLSEFWMIEPEMAFCHLEENMDRAEDFLKFVIQYIIENCIEDLSFLK 286



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L     EI  G  R    +++L+   +  I     + +        + G  PH G   G 
Sbjct: 391 LFPEIGEIIGGSQREERYDILLKRIKDKNID----DRKLWWYLDTRRFGSVPHSGFGLGF 446

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           DR+V  + G KN+R+V  FP + +
Sbjct: 447 DRLVQFITGMKNIRDVIPFPRTPH 470


>gi|294943905|ref|XP_002784004.1| aspartate--tRNA ligase, putative [Perkinsus marinus ATCC 50983]
 gi|239897008|gb|EER15800.1| aspartate--tRNA ligase, putative [Perkinsus marinus ATCC 50983]
          Length = 366

 Score =  152 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 66/271 (24%), Positives = 111/271 (40%), Gaps = 23/271 (8%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           TH    L  +     V +       R  G  + F+ +R   G  QVV        + A +
Sbjct: 90  TH----LDATMKDQKVWIRARCQNTRKQGGKLSFVTLRQGLGTVQVVVFGGDIA-KFAGN 144

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE----- 119
           +  E V+ + G V +   E I +   + ++EL A++I  +S A+ LPL            
Sbjct: 145 LSKESVVDLYGTV-TVPEEPIRSTTQS-EVELQAERIFCISRAQALPLQFEDLERTEADV 202

Query: 120 -------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                       R   R +DLR       +  ++ +    R  +I +  +E  TP L  +
Sbjct: 203 EAGEGARVSLDTRLDNRVIDLRTKANQAILRVQSGVSMLFREFLIQKGLVEIHTPKLLGA 262

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + EG  D        + ++ A  Q+PQ YKQ+ + +     F+I P FR E   + R   
Sbjct: 263 ASEGGADVFKVQYFERNAYLA--QSPQLYKQMALMTDLPGVFEIGPVFRAEKSLTFRHMT 320

Query: 233 EFYQLDMEMSFVE-QDDILNTMENVLRGVFE 262
           EF  LDMEM F +   ++L+ ++     +F 
Sbjct: 321 EFVGLDMEMRFADNYHEVLDVIDGTFDHIFH 351


>gi|66823903|ref|XP_645306.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|75009089|sp|Q75JQ1|SYDC1_DICDI RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic 1; AltName:
           Full=Aspartate--tRNA ligase 1; Short=AspRS 1
 gi|60473324|gb|EAL71270.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 576

 Score =  152 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 135/393 (34%), Gaps = 55/393 (13%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH-YGITQVVAN---PDSACFEIAK 63
              L  S VG  V +   +   R  G  + F+ +RD  Y +  VVA       +  +   
Sbjct: 89  VSQLTESLVGKSVLIRARLSTSRLQGANLCFVQLRDGLYTVQAVVAKGGSNSKSMVQFVG 148

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA---------------- 107
            V  E ++ +   V+S S    +    +  +EL      I+S +                
Sbjct: 149 QVPKESIVDVQATVVSTSVPIESCTQKS--VELQVSSFFIVSKSTLLPLQIEDLSRAQPL 206

Query: 108 ----------------------------EELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                                       E+            +  R   R LDLR     
Sbjct: 207 LDKQEDDLKQLEQLLQNTNLNEQEKTDLEKKKSECIKFVNVSQEKRLDNRALDLRVPAHQ 266

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
                ++ +    R +++ E FIE  +P + +++ E        +  N  ++ A  Q+PQ
Sbjct: 267 SIFRLQSGVCTLFREQLLGEGFIEIHSPKIISAASESGASVFKLNYFNTHAYLA--QSPQ 324

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLR 258
            YKQ+ + + F++ F+I P FR E+  + R   EF  LD+EM+F +   + L+T++ ++ 
Sbjct: 325 LYKQMAICADFNKVFEIGPVFRAENSNTHRHLTEFVGLDLEMTFKDHYHEALDTLDRLMT 384

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
            +F             +   Y     ++    P          + E     ++ V     
Sbjct: 385 SIFRGLETRFAKEIESVNTQYPFEPFKFTYPSPRFTFDEAAAMLAELN-DPDYIVKDNDF 443

Query: 319 SVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
           +      +  I  +  G +    D+ +   R  
Sbjct: 444 NTRQEKRLGKIIKEKFGVDFFIVDKFHVEVRPF 476



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 59/151 (39%), Gaps = 24/151 (15%)

Query: 422 QELGIINCNCFEFCW-IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           + LG I    F   + I+D           K      PF            N+     A 
Sbjct: 449 KRLGKIIKEKFGVDFFIVD-----------KFHVEVRPFYTMPD------PNNPQ--WAN 489

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            YDL   G EI SG  R H  E++ ++  + G+  E ++    G   +F+ G   H G  
Sbjct: 490 AYDLFMRGEEICSGAQRIHDPELLEKSAKSHGVVIEDIQ----GYIDSFKYGCSQHAGGG 545

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G++R+VML LG  N+R+ S  P        
Sbjct: 546 VGLERVVMLYLGLGNIRKASFCPRDPTRLTP 576


>gi|255950584|ref|XP_002566059.1| Pc22g21630 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211593076|emb|CAP99451.1| Pc22g21630 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 967

 Score =  152 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 134/372 (36%), Gaps = 30/372 (8%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFEIA- 62
           RT    D+ ++  G  V  S  +H +R     ++FL  R      Q V +       IA 
Sbjct: 147 RT-RIDDITLAMEGQEVFFSARLHVIRRLSAKLVFLVFRQQLATFQGVLHEREGISSIAM 205

Query: 63  ----KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEI---------LSVAEE 109
               + +R    + + G +       +  +I    +EL    + +          SV E 
Sbjct: 206 IQWVEHLRVGSFVMVRGTIQKPEVPVLGCSIH--DVELVIDSVHLQVRREEPVPFSVYEA 263

Query: 110 LPLPVFGER------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
                  ER        P+  R   R LDLR  T       +    N  R  +    F+E
Sbjct: 264 EIRTNEEERAEGRRNHIPDRTRLANRILDLRTSTSQSIFRIQAATCNLFRAALDDREFVE 323

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
             TP L  ++ E        +   + +F A  Q+PQ  KQ+ +A+ F R ++I   FR E
Sbjct: 324 IHTPKLQGAATESGASVFQVNYFGRPAFLA--QSPQLAKQMAIAADFGRVYEIGAVFRAE 381

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           +  + R   E+  LD+EM+  E   ++L T++ V++ + +     +      ++  +   
Sbjct: 382 NSNTHRHLTEYTGLDLEMAIEEHYHEMLETLDAVIKNILKGLYTKHRREVELVKCQFPSE 441

Query: 283 IRRYGTDKPDLRNPIIMHNVTE---HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
              +    P +R    +  + +        E     + L       +  +  +  G +  
Sbjct: 442 DVVWLEKTPIIRFTDGIKMLNDSGWLNEDGEQLPLDEDLGTRDEIRLGELVKEQYGTDYY 501

Query: 340 FCDRMNEWARSQ 351
             D+    AR  
Sbjct: 502 VLDKFPRSARPF 513



 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 21/166 (12%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   +  PF TMP    +    +         +D+   G EI SGG R H   ++ +   
Sbjct: 505 KFPRSARPFYTMPDAEDDKYTNS---------FDMFIRGQEIVSGGQRIHDVHMLEENMR 555

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            VGI+ + +E         F+ G PPH G   G++RIVML+L   N+R  S+FP      
Sbjct: 556 RVGINPDDMEE----YLEGFRWGAPPHAGAGVGLERIVMLILKLGNIRLTSMFPRDPKSL 611

Query: 570 DLLMGSPSTVSVEQLRELGLRIVENP-KKILKISVTTILRNVYGLK 614
                 P+    EQLR      +E P  +  K    +    +  L+
Sbjct: 612 ------PAKPVSEQLRHPESSTIEPPWHREHKARAASDPSELQPLE 651


>gi|296242442|ref|YP_003649929.1| aspartyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296095026|gb|ADG90977.1| aspartyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 420

 Score =  152 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 73/325 (22%), Positives = 126/325 (38%), Gaps = 23/325 (7%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCIDGLVM 78
           R+ GWV R +  G ++ +++        V+      +   + ++K++     LC +G V 
Sbjct: 6   RVCGWVLRKKEIGKVVIIEVTGSRSKPYVLVFKEEREPQLYAVSKTLDVGTALCFEGEVA 65

Query: 79  SRSAETINANIITGQIELSAQKIEILSV-AEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +              IE +  KIEI S  A  LP+ V G+       R KYR+L LR   
Sbjct: 66  TEQKSRR-------GIEYTVSKIEIYSKPASPLPVEVSGKVPSLLDTRIKYRWLLLRNPA 118

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  R  + ++ R  +    F E  TP + A+  EG             ++  L Q+
Sbjct: 119 EKAIFNIRESVFHAAREYLRRNGFHEVQTPKIVAAGAEGGATLFKVEYFEYQAY--LSQS 176

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMENV 256
           PQ YKQ+LM + + R ++I P FR E   + R   E + +D+E  F+   +D+L T+EN+
Sbjct: 177 PQLYKQILM-NAYPRVYEITPYFRAEKFNTPRHLNESWGIDVEQGFINGVEDVLETLENL 235

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +  +     + N      L +  +     +          +    V +        V  K
Sbjct: 236 VSYIINYVVDNNKEDLETLGVNLERINPPFKR--------LKFTEVVDILKSEGIEVSEK 287

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFC 341
               +   +      K  G    F 
Sbjct: 288 EDLPDHAEKKLGEIMKSKGHRLYFI 312



 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 27/155 (17%)

Query: 415 DARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           D  +H  ++LG I+        +I  FP   WN        A   + M + G        
Sbjct: 289 DLPDHAEKKLGEIMKSKGHRLYFITGFP---WN--------ATGFYYMREDG-------- 329

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                  ++DL   G EIASGG R H  + +++A    G++       F     +F+ G+
Sbjct: 330 ---SYTRKFDLDYEGLEIASGGQREHRYDKLVEALILKGLNP----ESFQFYLESFKYGI 382

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PPHGG   G++R++M +L  +NVRE  LF   +  
Sbjct: 383 PPHGGFGLGVERLLMKMLNLENVREAILFVRDRTR 417


>gi|41615317|ref|NP_963815.1| hypothetical protein NEQ535 [Nanoarchaeum equitans Kin4-M]
 gi|40069041|gb|AAR39376.1| NEQ535 [Nanoarchaeum equitans Kin4-M]
          Length = 404

 Score =  152 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 78/302 (25%), Positives = 129/302 (42%), Gaps = 29/302 (9%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK-SVRSEWVLCIDGLVMSRS 81
           + GWVH+VR  G I FL IRD Y I Q V     +   +    +  E  + I+G     +
Sbjct: 8   IKGWVHKVRDLGKIKFLLIRDGYKIMQAVIKKGESPDYLLDLDIPIESAVEIEGEERETN 67

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
            +           E+  + ++IL+ AE LP      ++     RF YR +DL+       
Sbjct: 68  GKK----------EILVKDLKILAKAEPLP---IDPKKATPKKRFDYRIIDLKLPERQTL 114

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
              R ++    R   +   F+E +TP +     E   +        + ++  L Q+PQ Y
Sbjct: 115 FRLRAKVQKFFRDWFMENGFVEINTPKIVIIGAESGAEVFPVLYFGKEAY--LTQSPQLY 172

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGV 260
           KQ +M S F + F+IA  +R E  R+ R   EF  +D EM F+ ++ D++NT++ +L  V
Sbjct: 173 KQ-MMVSVFPKVFEIAFAYRAEPSRTSRHLAEFTSVDAEMGFIKDEYDVINTIKKMLIDV 231

Query: 261 ---------FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
                    FEE +    +   F  I +D+A      +  +         + EHF+    
Sbjct: 232 SEKAMQTKEFEELAKP--IDLGFEIITFDEAKEIVKGNPNEDLTTEEERKLGEHFMEEGV 289

Query: 312 RV 313
             
Sbjct: 290 SF 291



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 12/112 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K  ++  PF   +                  +D++  G EI SG  R H  E +L+    
Sbjct: 296 KYPWSERPFYTMRLDD--------NPSYTRGFDIIFRGLEIISGAQREHRYEKLLENIKE 347

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            GI      N+      AF+ GMPPHGG   G++R +  LLG  +VREV LF
Sbjct: 348 KGIDP----NKLEYYLMAFKYGMPPHGGFGLGLERYLRQLLGLDDVREVILF 395


>gi|54020381|ref|YP_115687.1| lysyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|53987554|gb|AAV27755.1| lysine--tRNA ligase [Mycoplasma hyopneumoniae 232]
          Length = 556

 Score =  152 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/333 (16%), Positives = 120/333 (36%), Gaps = 26/333 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            +  +G + R R    IIF                 +    I  ++    ++ + G +  
Sbjct: 124 KIAFAGRLIRQRGPFFIIFSQNLQFQAYISKEFQKKNEF--IFANLDLGDIIEVSGYL-- 179

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                      TGQ+ +      +L+ +       +   E P+   ++ R+LDL  ++  
Sbjct: 180 -------FKTQTGQLSIKVNNFSLLTKSLHPLPDQYYGIENPDEK-YRKRYLDLLVNSES 231

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
               + R++II+ +R    ++ F+E  TP+L       +    +    +    + L  A 
Sbjct: 232 AKTFRLRSKIISLIRTFFDSQGFLEVDTPVLQPVLGGASAKPFITYYNSLSQNFYLRIAT 291

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L+ +GFDR ++I   FR+E   S   P EF  ++   ++   + I++  EN+ R
Sbjct: 292 ELPLKKLLVAGFDRVYEIGKIFRNEGFDSTHNP-EFTSIEFYQAYANLEKIMDQTENLFR 350

Query: 259 GVFEEF-SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
            +FE+   +      +  +I + +   RY            M  +T   ++ + +  +  
Sbjct: 351 FLFEKLNLDPANFDFSNKKINFLEKFARY-----------DMIEITSKLMNFDLKSANFA 399

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
             V    +                    ++   
Sbjct: 400 DLVEKAKKEGVKIEPFFKKGHLINKFFEKFVEP 432



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 4/92 (4%)

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMPPHGG 538
           +L   G E A+     +     L  F    I K    +          +A + GMPP GG
Sbjct: 465 ELFICGKEFANMFDELNDPIDQLSRFQAQIIEKNQGNQEASEIDNEFVQALEYGMPPAGG 524

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              GIDR+ MLL   +++REV LFP  +   D
Sbjct: 525 CGIGIDRLTMLLTKNESIREVILFPQLKPKKD 556


>gi|153813414|ref|ZP_01966082.1| hypothetical protein RUMOBE_03834 [Ruminococcus obeum ATCC 29174]
 gi|149830506|gb|EDM85597.1| hypothetical protein RUMOBE_03834 [Ruminococcus obeum ATCC 29174]
          Length = 448

 Score =  152 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 73/295 (24%), Positives = 115/295 (38%), Gaps = 19/295 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G S +   V L G VH +R  G + F+ +R   G+ Q V   + A   I   ++    L 
Sbjct: 25  GTSLLNQEVVLEGAVHSIRNMGDVAFVILRRSEGLFQTVVENEKANLSI-HDLKEAMTLR 83

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLP-VFGEREYPESIRFKYRF 130
           + G++                 E+  Q+IEILS  AE +PL     +       +   R 
Sbjct: 84  VKGILHEEERAPHGR-------EVRVQEIEILSSPAEPMPLAIDKWKLNTSLEAKLNLRP 136

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           + LR          +  ++ + R  +  + F E  TP + A   EG  +    S  ++ +
Sbjct: 137 IALRNIQERSKFKIQEALVRAFRDFLYEQGFTEIHTPKIGARGAEGGANLFKFSYFHKPA 196

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDI 249
             A  Q+PQ YKQ +M   FDR F+  P FR E   + R   E+  LD EM +++  +DI
Sbjct: 197 VLA--QSPQFYKQ-MMVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFEDI 253

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +      L+   E            L I             P +R       V+E
Sbjct: 254 MGMETGFLQYAMELLKKDYAKELQILNIQLPKV-----DQIPTVRFDKAKELVSE 303



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF       +              +DL+ +G E+ 
Sbjct: 334 DFVFVTHYP------------SKKRPFYAMDDPQDDKF--------TLSFDLLFHGLEVT 373

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H    +    +  G+ +E +E         F+ GMPPHGG+  G++R+ M LLG
Sbjct: 374 TGGQRIHDYNQLKAKIAARGMEEEGMEQ----YLDTFKHGMPPHGGLGIGLERLTMQLLG 429

Query: 553 AKNVREVSLFPMSQNFCDL 571
            +NVRE  LFP   N  + 
Sbjct: 430 EENVREACLFPRDLNRLEP 448


>gi|219129606|ref|XP_002184975.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403470|gb|EEC43422.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 460

 Score =  152 bits (385), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 65/322 (20%), Positives = 118/322 (36%), Gaps = 41/322 (12%)

Query: 9   CGDLGVS-DVGSFVRLSGWVHRVRPHGGIIFLDIRDHY--GITQVVANPDSACFE----- 60
             +LG     G  V L G +  +R  G   FL +R +    +                  
Sbjct: 4   VAELGRQYQSGDRVWLRGRLQSIRGKGKSWFLVLRQNSFDTVQACYFKNVDDAEASQKMI 63

Query: 61  -IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              K++ +E V+ ++G ++    ++ +       +EL+  +I  +S A+ +      +  
Sbjct: 64  RYLKTLTAESVVDLEGTLVDADVKSCSVK----NVELNIHRIHTVSKADAILPFEVEDAA 119

Query: 120 YPE------------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENF 161
             E                   +R  +R++DLR    +  +  ++ +            F
Sbjct: 120 RSEQEVEASQNTERPFPRLGQELRLDHRWMDLRAPANNAIMRIQSAVCQLF-------GF 172

Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
            E  TP L A   E              +   L Q+PQ YKQ+ +AS   R F+I P FR
Sbjct: 173 CEIHTPKLIAGESESGAGVFTTDYFGTTA--CLAQSPQLYKQMAIASDLPRVFEIGPVFR 230

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
            E+  + R   EF  LD+EM+  +   + L  +  + + +F    +      N +R  YD
Sbjct: 231 AENSNTRRHLCEFTGLDLEMAIDDHYLETLEVVHELFKHIFTGLESRWAKELNIIREQYD 290

Query: 281 DAIRRYGTDKPDLRNPIIMHNV 302
                +  D   L  P  +  +
Sbjct: 291 SEPVAFTPDPCVLHWPEALEIL 312



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 19/135 (14%)

Query: 438 MDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
            DF   +      K   +  PF TMP             S  +  YD+   G EI SG  
Sbjct: 344 TDFFMLD------KYPSSIRPFYTMPDPED---------SRYSNSYDIFIRGQEICSGAQ 388

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H  +++ +     GI    V +       +F+ G+ PH G   G++R+V L LG  NV
Sbjct: 389 RCHDPDLVEKILQEKGI---EVGDGLKSYIESFRHGVSPHAGAGIGLERVVFLYLGLDNV 445

Query: 557 REVSLFPMSQNFCDL 571
           R+ S+FP   N C  
Sbjct: 446 RKASMFPRDPNRCTP 460


>gi|581319|emb|CAA52877.1| putative lysyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 488

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 65/320 (20%), Positives = 122/320 (38%), Gaps = 21/320 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
            +    +G +  +R      F+ ++D+ G  Q+ AN  +     AK+          G +
Sbjct: 56  NTEFVFNGRIMTIRGP----FIVLQDNCGQMQIYANKKTLNESSAKTFSLMDF----GDI 107

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +S        N  T  + + AQ +  L+ + + PLP           R + R++DL  + 
Sbjct: 108 LSVRGTLSKTN--TDALVMKAQDMVTLTKSLK-PLPDKFHGLVDPEERRRQRYVDLMMNE 164

Query: 138 LHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
             +N  V RT+II  +R    + N+IE  TPIL       A    +         + L  
Sbjct: 165 KTRNTFVMRTQIIKGIREYFDSLNYIEVDTPILNPMLGGAAAKPFITFYNATNRNFYLRI 224

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           A +   + L+  G DR ++I   FR+E   +   P EF  ++   ++ +   ++   E V
Sbjct: 225 ATELPLKKLIVGGLDRVYEIGRMFRNEGVDTTHNP-EFTSIEFYEAYSDLWGMMERTEGV 283

Query: 257 LRGVFEEFS--------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
            + +  +F+           T +  F R+   DA+           N   M  + +    
Sbjct: 284 FKHLMNKFNIKEVKFNGFDMTFNFPFKRVNMIDAMSEKINVDIRKLNEEQMFELAKKHGI 343

Query: 309 SEFRVFSKILSVNPGYEVWA 328
              + F     +N  +E + 
Sbjct: 344 KIEKFFRYGHIINELFEKYV 363



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 55/149 (36%), Gaps = 6/149 (4%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
            +A++ GI     F +  I++   +E   EE  ++         +    +    D     
Sbjct: 336 ELAKKHGIKIEKFFRYGHIIN-ELFEKYVEETLMEPTFVYGHPIEISPTAAIDPDDKRFT 394

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMP 534
               +      E A+     +     LQ F N  + KE               A + GMP
Sbjct: 395 TRA-ETFIGTKEFANMFTELNDPIDQLQRFENQLLEKENGNEEANEIDWDFVNALEYGMP 453

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P GG   GIDR +M L    ++R+V LFP
Sbjct: 454 PTGGSGMGIDRTIMTLTQNDSIRDVVLFP 482


>gi|313678487|ref|YP_004056227.1| asparagine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950370|gb|ADR24965.1| asparagine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 452

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/263 (20%), Positives = 106/263 (40%), Gaps = 16/263 (6%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V L GWV   R +  I FL I D   +   QV    D+  F++   +R+   + + G ++
Sbjct: 21  VTLRGWVVSNRGNNKIRFLTISDGSTVENIQVTFKGDNFDFKLLDEIRTGAAIEVYGTIV 80

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                          +E+ A K  +L   +        ++E       +   L  R + L
Sbjct: 81  LTPK-------AKQPLEVLASKFVLLKNVDHDFPIQ--KQEINLETLREIPHLRHRTNLL 131

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY-----A 193
              ++ R+ +   +       NF+  S PI+T++  EGA +    +  N+   +     A
Sbjct: 132 KCVMLIRSTLALEIHKFFAENNFLNFSAPIITSNDGEGAGEQFYVNDGNKEQPFFGSNNA 191

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                 Q      A GF++ +  AP FR E   + +   EF+ ++ E++F +   ++N  
Sbjct: 192 TLGVTGQLHAESYAVGFEKVYTFAPTFRAEHSNTKKHAAEFWMIEPEIAFYDLKKVINFA 251

Query: 254 ENVLRGVFEEFSNGNTVSNNFLR 276
             +L+ V +     +    ++L+
Sbjct: 252 TKLLKNVIKNTIKKHPKEFDYLQ 274



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 87/247 (35%), Gaps = 36/247 (14%)

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHL 379
           + P    + +        +   + +    +        Y+   +DE+        + K L
Sbjct: 235 IEPEIAFYDLKKVINFATKLLKNVIKNTIKKH-PKEFDYLQNNVDETLLERLNTFIKKKL 293

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
            +++ +   V L+ +  D   F   D      FA +   ++A+E+            I++
Sbjct: 294 MVLDYKDALVELE-KVKDR--FENQDINFGLDFATEHEKYLAEEI------AHGPIAIIN 344

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRN 498
           FP             +   F M Q   +              +DL+  G  E+  G  R 
Sbjct: 345 FP------------KSFKAFYMYQNDDDKTVA---------AFDLLVPGIGELIGGSQRE 383

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              E +L+    VGISKE ++          + G     G   G +R+VM + G  N+R+
Sbjct: 384 VRYEKLLERALEVGISKEELQ----WYLDLRRFGHAGSAGFGIGFERLVMYITGVDNIRD 439

Query: 559 VSLFPMS 565
           V  +P +
Sbjct: 440 VIPYPRT 446


>gi|197294192|ref|YP_001798733.1| asparaginyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|226695300|sp|B1V8X4|SYN_PHYAS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|171853519|emb|CAM11361.1| Asparaginyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 457

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 102/277 (36%), Gaps = 27/277 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS-VRSEWVLCIDG 75
           +G  + ++GW+   R    +IF+++ D   +        +   E  K  ++    L ++G
Sbjct: 16  LGKKIIVNGWIRNCRFQKKLIFIELNDGTFLENFQIVYKNVDLEKIKDILQIGTSLKVEG 75

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            +     +  N       +E+ AQ I +L  ++         +++ +S       L  R 
Sbjct: 76  FLKKNEKQEKN-------LEILAQNITLLGSSD--FSYPIQPKKHSKSFLRTIPHLRTRT 126

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------- 187
                    R+    ++      + F   +TPI+T +  EGA +    + +N        
Sbjct: 127 KLFGAVFRIRSTAFFALHHFFHKKGFFHINTPIITPNDGEGAGELFQLTSLNLERLSQEK 186

Query: 188 ------QGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                 Q  F+          Q +   MA   ++ +   P FR E   + R   EF+ L+
Sbjct: 187 PSTINYQKDFFGKKVFLTVTGQLEAEAMALALNKVYTFGPTFRAEKSNTPRHAAEFWMLE 246

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            EM+F +    L   + +L+ V  +    N     FL
Sbjct: 247 PEMAFCDLKQNLKVAQEMLQEVVVQCLQENQKDIEFL 283



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 26/145 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +  +  +I+D+P     +E K        F M          N+        
Sbjct: 337 HEKFLTEKHFQKPVFIIDWP-----KEIK-------AFYMK---------NNPDQKTVAA 375

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+     E+  G  R     V+++    + I     +  F       + G   H G  
Sbjct: 376 MDLLIPRVGELIGGSQREENLAVLIEKMQQMKIP----QKEFEWYLDLRRFGSCIHSGFG 431

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMS 565
            G +R+++ L G  N+R+V  FP +
Sbjct: 432 LGFERLLLFLTGLDNIRDVIAFPRT 456


>gi|47459342|ref|YP_016204.1| asparaginyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|59798538|sp|Q6KHD7|SYN_MYCMO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|47458672|gb|AAT27993.1| asparaginyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 447

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 104/261 (39%), Gaps = 14/261 (5%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
               +  WV   R +  I F++I D   I   QVV   +   F     +R    + + G+
Sbjct: 17  KEFEIKAWVASNRGNTNIRFVEINDGSTIKNLQVVIKKEIMSFLEVDKIRLGAAIHVKGV 76

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +            +  +IEL+A K  +L   +E       ++E       +   L  R  
Sbjct: 77  LKYTPG-------MAQEIELNADKFILLKNTDEDFPIQ--KKETSLEALREIPHLRHRTT 127

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           TL   ++ R+ +   +        ++  S+PI+T +  EGA +  V    ++  F+    
Sbjct: 128 TLRAIMLIRSTLALEIHKFYNERGYLWVSSPIITGNDGEGAGESFVVDDESKDFFFNKKA 187

Query: 197 A---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
                 Q      A GF + +  AP FR E+  + +   EF+ ++ E++F +  D++   
Sbjct: 188 TLGVTGQLHAEAYALGFSKVYTFAPTFRAENSNTTKHAAEFWMMEPEVAFFDLKDLIKMS 247

Query: 254 ENVLRGVFEEFSNGNTVSNNF 274
           +++LR V +     +     F
Sbjct: 248 DDMLRQVIKRTVEAHPHEFEF 268



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 14/117 (11%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSN 510
              +   F M Q                  YDL+  G  E+  G  R    E ++Q   +
Sbjct: 340 YPKSFKAFYMFQNEDNETVA---------AYDLLVPGIGEVIGGSKRETRYEKLVQRVKD 390

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           + I+    +          + G     G   G +R++M + G +N+R+   FP +  
Sbjct: 391 LKIN----QEDLQWYLDLRRFGQASSAGFGLGFERLIMYITGTENIRDTIPFPRTPK 443


>gi|74214101|dbj|BAE29462.1| unnamed protein product [Mus musculus]
 gi|74219569|dbj|BAE29555.1| unnamed protein product [Mus musculus]
          Length = 438

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 63/327 (19%), Positives = 123/327 (37%), Gaps = 29/327 (8%)

Query: 31  RPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMSRSAETINANI 89
           R  G + F  ++D  G          +  E+ K     W   +D G  +S     I++  
Sbjct: 2   RNTGKLCFATLQDGDGTQ---VQAMLSLAEVGKERLDAWKSDVDLGDFISVRGRVISSR- 57

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRI 148
             G++ +   +  + + +       F   +  E  R + R+ DL  R+   KN + R ++
Sbjct: 58  -RGELSIMVSEWTMAAKSLRPLPVSFA--DMAEDTRVRQRYNDLIIREDARKNAMIRVKV 114

Query: 149 INSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           + ++R  + +++F+E  TP+L        AR F+  S       Y L  AP+ Y +  + 
Sbjct: 115 MRALRNYLESQDFVEIETPMLQTLHGGAAARPFITHSNALDIDLY-LRIAPELYLKRAVV 173

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            G DR F+I   FR+E       P EF  L+   ++ + +D        ++ V  +    
Sbjct: 174 GGIDRVFEINRNFRNEGVDRSHSP-EFAMLETYAAWGDYNDCARMTRESIQAVARDVFGS 232

Query: 268 NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN--------VTEHFVHSEFRVFSKILS 319
            TV+     +         G + P++     ++           E  + ++      I  
Sbjct: 233 TTVT-----LADGTEFDFGGEEWPEIEMYPSLNEALQRKFPGQPEVTIDTDVETLKGIAD 287

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNE 346
                    +P  GG G+    + + E
Sbjct: 288 ----VIGLDVPKDGGWGHGKLVEEIWE 310



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 ++DL   GFE+A+G        +  + F +        ++           A +
Sbjct: 340 EPGVTEKWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMVLDEDFLAAME 399

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GMPP  G   G+DR++M L G   +RE  LFP
Sbjct: 400 QGMPPTAGTGMGMDRLLMALTGLG-IRETVLFP 431


>gi|213421202|ref|ZP_03354268.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 252

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 9/199 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L  
Sbjct: 61  LEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL-- 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 119 -GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDL 174

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  K R++I+  +R  M+A  F+E  TP++        AR F+          
Sbjct: 175 ISNDESRNTFKTRSKILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDM 234

Query: 192 YALPQAPQQYKQLLMASGF 210
           Y L  AP+ Y + L+  GF
Sbjct: 235 Y-LRIAPELYLKRLVVGGF 252


>gi|312215055|emb|CBX95008.1| similar to aspartyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 555

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 69/292 (23%), Positives = 120/292 (41%), Gaps = 33/292 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSE 68
            S+    V    WV   R     + FL++R +   +  VVA  D    ++ K   ++ +E
Sbjct: 90  ASNEDKEVTFRCWVENARVQSAKLAFLNLRQNLNTVQAVVAASDKLSKQMVKFCGNISTE 149

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE------ 122
             L + GLV        +A I     E+  QK+ I S AE        + E P       
Sbjct: 150 STLVVTGLVKRVKEPIKSATIK--DFEIHVQKLFIESKAEVPLPLQVEDAERPLPSDAVV 207

Query: 123 -----------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
                            + R   R +DLR        V ++ +    +  +  + F+   
Sbjct: 208 EDADKLQEGEERPLVSLNTRLNNRTIDLRAKINQSIFVIKSGVCALFQEFLSKKGFVLVH 267

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP +  ++ EG  +       ++ ++ A  Q+PQ YKQ+L+AS F +  +I P FR E+ 
Sbjct: 268 TPKILGAASEGGANVFELKYFDRPAYLA--QSPQFYKQMLIASRFQKVMEIGPVFRAENS 325

Query: 226 RSDRLPGEFYQLDMEMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            + R   EF  LD+EM F E   +++  +E+++  +F E +         +R
Sbjct: 326 NTARHLTEFTGLDLEMEFQENYHEVMGVLEDLMLFIFGELNARYRKETELVR 377



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 55/152 (36%), Gaps = 22/152 (14%)

Query: 422 QELGIINCNCFE--FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           ++LG +    +   F  +  FP                 +TMP     SL         +
Sbjct: 424 KKLGKLVLEKYNSDFYTLDQFPL-----------AIRPAYTMPSPADPSL---------S 463

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+   G EI SG  R H S ++ +         +            F+ G PPH G 
Sbjct: 464 NSYDMFMRGQEICSGAQRIHDSSLLAEMMRKHDPPIDPAGAGTKDYVDCFKYGCPPHAGG 523

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             G++RIV   LG  N+R  SLFP   +    
Sbjct: 524 GFGLERIVQFWLGLPNIRMCSLFPRDPSRVAP 555


>gi|19111917|ref|NP_595125.1| cytoplasmic asparagine-tRNA ligase Nrs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|59798599|sp|O94567|SYNC_SCHPO RecName: Full=Probable asparaginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|3850088|emb|CAA21915.1| cytoplasmic asparagine-tRNA ligase Nrs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 568

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 69/309 (22%), Positives = 114/309 (36%), Gaps = 30/309 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCID 74
            S VR++GWVHR+R   GIIF+ +RD  G  Q V +    D A ++    +  E  +C+ 
Sbjct: 141 DSRVRVNGWVHRMRTQKGIIFIILRDGTGFLQCVLSGKVYDRASYDFIN-LGPESTVCLY 199

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--EREYPESIRFKYRFLD 132
           G++              G  EL     +IL  A             E   S     R L 
Sbjct: 200 GVIKELPEG----KSAPGNHELVVDYYQILHAAPTGEEAFTNRLNAEAEPSYLLDQRHLV 255

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +T    +  R R + +MR         E + P +  +  EG       +   Q ++ 
Sbjct: 256 IRGETASSVLKVRARALRAMRDTFENLKMTEVTPPCMVQTQVEGGATLFKFNYYGQDAY- 314

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  +       + I   FR E   + R   EF  ++ E+ FV   + L  
Sbjct: 315 -LTQSSQLYLEAALP-ALGSVYTIQESFRAEKSLTRRHLSEFTHVEFELPFVNFGEFLEI 372

Query: 253 MENVLRGVFEEFSNGNT--------------VSNNFLRICYDDAIRRYGTDK---PDLRN 295
           +E  +    +   +                  S  F+R+ Y+DAI+         P+   
Sbjct: 373 IEEFICQTIDRLLDDPIATPLIKQLNPDFVKPSRPFMRLSYEDAIKYLNEHNILTPEGEQ 432

Query: 296 PIIMHNVTE 304
                ++ E
Sbjct: 433 HKFGDDIAE 441



 Score = 64.3 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R    + +L A+   GI        +       + G   HGG   G+
Sbjct: 485 LMPNVGEIVGGSMRISDIQELLAAYKREGIDPAP----YYWFTEQRKYGTTEHGGCGLGL 540

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R +  L     VRE  LFP     C  
Sbjct: 541 ERFLAWLCDRYTVRECCLFPRFTERCTP 568


>gi|308189992|ref|YP_003922923.1| asparagine--tRNA ligase [Mycoplasma fermentans JER]
 gi|307624734|gb|ADN69039.1| asparagine--tRNA ligase [Mycoplasma fermentans JER]
          Length = 454

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 101/277 (36%), Gaps = 16/277 (5%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE 68
           +         + +  WV   R +  I F+ I D   +   QV    +   F+    +   
Sbjct: 13  EKSKEFKNKTLEIKAWVTSNRGNKKIRFISINDGSTVQSLQVTCKGEKFDFDKLDQIHLG 72

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G+V                +EL A K+++L  A+        ++          
Sbjct: 73  AAVEVKGIVALTPKAQQP-------LELVATKVKLLRDADLDFPIQ--KQGINLETLRDI 123

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             +  R + L   ++ R+ +   +        ++  + PI+T++  EGA +  V +  N 
Sbjct: 124 PHVRHRTNLLRATMLIRSTLAKEVHKYFDEHGYLYFNAPIITSNDGEGAGETFVVNDENS 183

Query: 189 GSFY-----ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              +     A      Q      A GF + +  AP FR E   + +   EF+ ++ E++F
Sbjct: 184 KDPFFGTRKATLGVTGQLHAESYAIGFKKVYTFAPTFRAEHSNTKKHAAEFWMIEPEVAF 243

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
            E  D +   +++L+ V +     +     FL    D
Sbjct: 244 YELKDAIKLADDMLKSVIKNTIKKHPAEFKFLNETVD 280



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 79/266 (29%), Gaps = 41/266 (15%)

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMG 373
           F K+ +  P +       K         +    +   +    LA    +      +    
Sbjct: 210 FKKVYTFAPTFRAEHSNTKKHAAEFWMIEPEVAFYELKDAIKLADDMLKSVIKNTIKKHP 269

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ---ELGI---- 426
              K LN    + +  RL+         I  D        A  ++       E G+    
Sbjct: 270 AEFKFLNETVDKGLLERLNHFLKTKLSVI--DYRDAIKELAKVKDQFENQDIEFGLDLAT 327

Query: 427 -----INCNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
                I+   F     +++FP             +   F M Q                 
Sbjct: 328 EHERYISEKIFNGPVAVINFP------------KSFKAFYMQQNDDNETVA--------- 366

Query: 481 QYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
            +DL+  G  E+  G  R    + +LQ    VGIS    +          + G     G 
Sbjct: 367 AFDLLVPGIGELIGGSQREVRYDKLLQRALEVGIS----QEELQWYLDLRRFGDSGSSGF 422

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMS 565
             G +R+VM + G  N+R+V  +P +
Sbjct: 423 GVGFERLVMYVTGVDNIRDVIPYPRT 448


>gi|328869079|gb|EGG17457.1| leucyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 587

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 113/263 (42%), Gaps = 24/263 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVANPDSACFE-----IAKSVR 66
           G         ++G +  VR     + F+DI  +    Q++A+      +     I +++R
Sbjct: 130 GSKLADVETVVAGRIVSVRTASTKLSFIDIMTNGHSLQIMADLKHYANKDQFQPIVETLR 189

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ I G         + +    G++ +  ++I +L+   +        ++     R+
Sbjct: 190 RGDIIEIRG---------VPSKTKVGELSIIPKEITLLTPCLKPIPLRLINKDT----RY 236

Query: 127 KYRFLDLRRD--TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP 183
           + R LD   +   +    + R+R+I+ +R  ++   F+E  TP+L+ +     A+ F   
Sbjct: 237 RKRHLDFLVNGHKIRDAFIVRSRMISFLRNYLVERGFLEVDTPVLSTNVGGAMAKPFRTH 296

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           S       + L  +P+ Y + L+ SGFDR F+I   FR+E       P EF   ++  ++
Sbjct: 297 SNALDLDLF-LRISPELYLKQLVISGFDRVFEIGKQFRNEGVDLTHNP-EFTTCELYQAY 354

Query: 244 VEQDDILNTMENVLRGVFEEFSN 266
            +   ++   E+++  +  + + 
Sbjct: 355 GDYHTMMALTEDLISKMVYDITG 377



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 4/98 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMP 534
             ++++   G E+ +     +        F      +    +  +    G   A   G+P
Sbjct: 487 TERFEMFVGGKELVNAYSELNDPTDQRDRFIQQSKDRLTGDDEAQIYDEGYCNALDYGLP 546

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
           P GG   GIDR+VMLL    ++R+V  FP  +     L
Sbjct: 547 PTGGWGLGIDRLVMLLTNNVSIRDVIFFPTMKPKSTPL 584


>gi|72080546|ref|YP_287604.1| lysyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 489

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/333 (16%), Positives = 120/333 (36%), Gaps = 26/333 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            +  +G + R R    IIF                 +    I  ++    ++ + G +  
Sbjct: 57  KIAFAGRLIRQRGPFFIIFSQNLQIQAYISKKFQKKNEF--IFANLDLGDIIEVSGYL-- 112

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                      TGQ+ +      +L+ +       +   E P+   ++ R+LDL  ++  
Sbjct: 113 -------FKTQTGQLSIKVNNFSLLTKSLHPLPDQYYGIENPDEK-YRKRYLDLLVNSES 164

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
               + R++II+ +R    ++ F+E  TP+L       +    +    +    + L  A 
Sbjct: 165 AKTFRLRSKIISLIRTFFDSQGFLEVDTPVLHPVLGGASAKPFITYYNSLSQNFYLRIAT 224

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L+ +GFDR ++I   FR+E   S   P EF  ++   ++   + I++  EN+ R
Sbjct: 225 ELPLKKLLVAGFDRVYEIGKIFRNEGFDSTHNP-EFTSIEFYQAYANLEKIMDQTENLFR 283

Query: 259 GVFEEF-SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
            +FE+   +      +  +I + +   RY            M  +T   ++ + +  +  
Sbjct: 284 FLFEKLNLDPANFDFSNKKINFLEKFARY-----------DMIEITSKLMNFDLKSANFA 332

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
             V    +                    ++   
Sbjct: 333 DLVEKAKKEGVKIEPFFKKGHLINKFFEKFVEP 365



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 4/92 (4%)

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMPPHGG 538
           +L   G E A+     +     L  F    I K    +          +A + GMPP GG
Sbjct: 398 ELFICGKEFANMFDELNDPIDQLSRFQAQIIEKNQGNQEASEIDNEFVQALEYGMPPAGG 457

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              GIDR+ MLL   +++REV LFP  +   D
Sbjct: 458 CGIGIDRLTMLLTKNESIREVILFPQLKPKKD 489


>gi|302406140|ref|XP_003000906.1| asparaginyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261360164|gb|EEY22592.1| asparaginyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 588

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/347 (17%), Positives = 116/347 (33%), Gaps = 33/347 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V+++G +HR+R      F+ + D YG +  V+   D      A        L + G 
Sbjct: 158 GEKVKIAGRIHRLRAQKNATFITLIDGYGHLQCVLQAGDLTKTYDALLFAQGTSLYVYGE 217

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLD 132
           +          +      EL  +  E++  +    + +   V  ++   +      R L 
Sbjct: 218 MRKVLEGQTAPDGR----ELLVEYFEVIGASPTDEDAITNRVSSQQNQWDPAMLDQRHLV 273

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR D     +  R  +  +        N  + S P L  +  EG          ++ ++ 
Sbjct: 274 LRGDNASAIMKIRAAVEWAFVKTFNDMNITKVSPPALVQTQVEGGSTLFSVPYYDEAAY- 332

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  + S     + I   FR E   + R   E+  ++ E+ F+  +D+L  
Sbjct: 333 -LTQSSQLYLETCLPS-LGDVYCIEKSFRAERSLTRRHLAEYTHVEAELDFISFEDLLEH 390

Query: 253 MENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNP-- 296
           +E ++  V +                         F R+ Y DAI       P + N   
Sbjct: 391 LEEIMCRVIDTVLADPIIAAHVKELNPTFERPVRPFNRMKYTDAIDWLNAQDPPILNEEG 450

Query: 297 ---IIMHNVTEHFVHSEFRVFSKI--LSVNPGYEVWAIPAKGGGGNR 338
              +   ++ E        + +K   L+  P         K     R
Sbjct: 451 KPHVFGDDIAEAAERRMTDIINKPIFLTHFPTEIKAFYMKKDPSDPR 497



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 46/124 (37%), Gaps = 8/124 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
            K I   H P T  +        +D    ++   D++  G  EI  G +R    E ++ A
Sbjct: 472 NKPIFLTHFP-TEIKAFYMKKDPSDPRVTESV--DVLMPGVGEIVGGSMRMEGYEELMAA 528

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +   GI  +     +       + G  PHGG   G++R +  L     VR   L+P    
Sbjct: 529 YDKQGIPSKD----YYWYTDQRKYGTSPHGGYGLGLERFLAWLANQHTVRTTCLYPRYMG 584

Query: 568 FCDL 571
            C  
Sbjct: 585 RCKP 588


>gi|166229887|sp|Q4A8F8|SYK_MYCH7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|144575320|gb|AAZ53581.2| lysyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 491

 Score =  152 bits (384), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/333 (16%), Positives = 120/333 (36%), Gaps = 26/333 (7%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            +  +G + R R    IIF                 +    I  ++    ++ + G +  
Sbjct: 59  KIAFAGRLIRQRGPFFIIFSQNLQIQAYISKKFQKKNEF--IFANLDLGDIIEVSGYL-- 114

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                      TGQ+ +      +L+ +       +   E P+   ++ R+LDL  ++  
Sbjct: 115 -------FKTQTGQLSIKVNNFSLLTKSLHPLPDQYYGIENPDEK-YRKRYLDLLVNSES 166

Query: 140 KNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
               + R++II+ +R    ++ F+E  TP+L       +    +    +    + L  A 
Sbjct: 167 AKTFRLRSKIISLIRTFFDSQGFLEVDTPVLHPVLGGASAKPFITYYNSLSQNFYLRIAT 226

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L+ +GFDR ++I   FR+E   S   P EF  ++   ++   + I++  EN+ R
Sbjct: 227 ELPLKKLLVAGFDRVYEIGKIFRNEGFDSTHNP-EFTSIEFYQAYANLEKIMDQTENLFR 285

Query: 259 GVFEEF-SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
            +FE+   +      +  +I + +   RY            M  +T   ++ + +  +  
Sbjct: 286 FLFEKLNLDPANFDFSNKKINFLEKFARY-----------DMIEITSKLMNFDLKSANFA 334

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
             V    +                    ++   
Sbjct: 335 DLVEKAKKEGVKIEPFFKKGHLINKFFEKFVEP 367



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 4/92 (4%)

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMPPHGG 538
           +L   G E A+     +     L  F    I K    +          +A + GMPP GG
Sbjct: 400 ELFICGKEFANMFDELNDPIDQLSRFQAQIIEKNQGNQEASEIDNEFVQALEYGMPPAGG 459

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              GIDR+ MLL   +++REV LFP  +   D
Sbjct: 460 CGIGIDRLTMLLTKNESIREVILFPQLKPKKD 491


>gi|269796472|ref|YP_003315927.1| lysyl-tRNA synthetase (class II) [Sanguibacter keddieii DSM 10542]
 gi|269098657|gb|ACZ23093.1| lysyl-tRNA synthetase (class II) [Sanguibacter keddieii DSM 10542]
          Length = 510

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/275 (19%), Positives = 108/275 (39%), Gaps = 20/275 (7%)

Query: 5   RTHSCGDLGVS----DVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPD 55
           RTHS  ++       + G      V ++G V  +R  G + F+ ++D  G   Q++ +  
Sbjct: 49  RTHSIAEVRAQYAHLETGEETDDLVGVAGRVVFLRNSGKLCFVSLQDGEGNRLQIMLSLA 108

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +++  L        R   +       G++ + A   +I + A      + 
Sbjct: 109 VVGEESLAAFKADVDLGDHLFAHGRVGSSRR-----GELSVFADSWQIAAKALRPLPVL- 162

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTR-IINSMRCRMIAENFIECSTPIL-TASS 173
             RE  E  R + R++DL      +   +    ++ S+R       ++E  TP+L T   
Sbjct: 163 -HRELSEEARVRQRYVDLIARPAAREAARLRAGVVRSLRENFHDRGYMEIETPMLQTIHG 221

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F           + L  AP+ + +  +  G +R F+I   FR+E   S   P E
Sbjct: 222 GAAARPFTTHMNAFDIDLF-LRIAPELFLKRAVVGGIERVFEINRNFRNEGADSTHSP-E 279

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           F  L+   ++ + + +    +N+++    +     
Sbjct: 280 FAMLEAYEAYGDYNSMAVLTKNLVQKAALDMFGTT 314



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 69/203 (33%), Gaps = 31/203 (15%)

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           +   +   G +++ L    T    V    +  D+      DP K           + +  
Sbjct: 329 DWAELTMYGSLSEALGEEITPQTTVARLTELADAVEISI-DPKKVNH--GKLVEELWEH- 384

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
             +  + +   ++ DFP               +P T     +           +  ++DL
Sbjct: 385 -HVGNSLYAPTFVRDFP------------VETSPLTRDHRSVP---------GQVEKWDL 422

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIA 540
              GFE+A+         V  Q F    +     ++           A +  MPP GG+ 
Sbjct: 423 YVRGFELATAYSELVDPVVQRQRFEAQAVLAAAGDDEAMVLDEDFLTAMEYAMPPSGGMG 482

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            G+DR++M L G   +RE  LFP
Sbjct: 483 MGLDRLLMALTGLG-IRETILFP 504


>gi|229819217|ref|YP_002880743.1| lysyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229565130|gb|ACQ78981.1| lysyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 503

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/265 (21%), Positives = 107/265 (40%), Gaps = 20/265 (7%)

Query: 5   RTHSCGDLGVSDV----GSF----VRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPD 55
           RT +   +  +      G      V ++G V  +R  G + F+ I D  G T Q + +  
Sbjct: 41  RTTTIAHVRAAHPDLEPGQETDDVVGVAGRVMFLRNTGKLCFVTIADGAGTTLQAMLSQA 100

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E  ++ +++  L   G  +      I++    G++ + A    I + A      + 
Sbjct: 101 EVGAESLEAFKADVDL---GDHLFVHGRVISSR--RGELSVFADSWSIAAKALRPLPTLH 155

Query: 116 GEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASS 173
                 E  R + R+LDL  R      +  R  ++ ++R      +F+E  TP+L T   
Sbjct: 156 AG--TSEETRVRRRYLDLIARPAARDVVRVRAEVVRALRAAFHERDFVEVETPMLQTQPG 213

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F+          Y L  AP+ + +  +  G DR F+I   FR+E   S   P E
Sbjct: 214 GAAARPFVTHMNAYDIDLY-LRIAPELFLKQAVVGGIDRVFEINRNFRNEGADSSHSP-E 271

Query: 234 FYQLDMEMSFVEQDDILNTMENVLR 258
           F  L+   ++ + D +    + +++
Sbjct: 272 FAMLEAYEAYSDYDGMARLTQELVQ 296



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 51/154 (33%), Gaps = 28/154 (18%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                 I + L  +  +     ++ DFP      +   +  AH                 
Sbjct: 367 GKVVEEIWEHL--VRPSLHTPTFVRDFPL-----DTSPLVRAHR---------------- 403

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
             +    ++DL   G EIA+G             F    +     +            A 
Sbjct: 404 DRAGVVEKWDLYIRGVEIATGYSELIDPVEQRARFEAQALLAAAGDPEAMRVDEEFLEAM 463

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +  +PP GG+  GIDR++M L G   VRE  LFP
Sbjct: 464 EHALPPLGGMGMGIDRLLMALTGLG-VRETILFP 496


>gi|321476711|gb|EFX87671.1| hypothetical protein DAPPUDRAFT_306578 [Daphnia pulex]
          Length = 560

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 63/340 (18%), Positives = 122/340 (35%), Gaps = 22/340 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  + F+ +RD  G+ Q V +        A ++ +E  + + G 
Sbjct: 137 GQRVKVFGWVHRLRRQGKALMFITLRDGTGLLQCVLSDQLCQTYDAVTLSTESSVQLFGT 196

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  EL+    +++  A           +    ++   R + +R +
Sbjct: 197 LKLVPEG----KSAPGGHELNVDYWKLIGSAPPGGAEALLNEDAHPDVQLDQRHMMIRGE 252

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
              K +  R+ I  + R    +  + E + P    +  EG       +   + ++  L Q
Sbjct: 253 NTSKVLRLRSVITQAFRDHYSSRGYNEVAPPTFVQTQVEGGSTLFELNYFGEKAY--LTQ 310

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y +  +       + IA  +R E  R+ R   E+  ++ E  F+  DD+L+ +E++
Sbjct: 311 SSQLYLETAIP-ALGDVYCIAQSYRAEQSRTRRHLSEYSHVEAECPFISFDDLLDRLEDL 369

Query: 257 LRGVFEEFSNGNT-------------VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V E                        F R+ Y +AI     +     +    +   
Sbjct: 370 VVDVSERVMASPYANLVLELNPTFVVPKKPFRRMNYSEAIVYLKENGITKEDG-SFYEFG 428

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
           E       R  +  +S       +    K     R   DR
Sbjct: 429 EDIPEMPERKMTDKISEPIMLCRFPAGIKAFYMKRCPEDR 468



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 15/116 (12%)

Query: 451 KIDFAHNPFTM-PQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAF 508
           +       F M        L             DL+  G  EI  G +R    + +++AF
Sbjct: 451 RFPAGIKAFYMKRCPEDRQL---------TESVDLLMPGVGEIIGGSMRTDDHDELVEAF 501

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
               I        +       + G  PHGG   G++R +  +L   ++REV L+P 
Sbjct: 502 KAADIDPTP----YYWYIDQRRFGTCPHGGYGLGLERFLCWMLNRYHIREVCLYPR 553


>gi|319777274|ref|YP_004136925.1| asparaginyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318038349|gb|ADV34548.1| Asparaginyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 452

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/341 (18%), Positives = 121/341 (35%), Gaps = 40/341 (11%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE 68
           +         + +  WV   R +  I F+ I D   +   QV    +   F+    +   
Sbjct: 11  EKSKEFKNKTLEIKAWVTSNRGNKKIRFISINDGSTVQSLQVTCKGEKFDFDKLDQIHLG 70

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G+V                +EL A K+++L  A+        ++          
Sbjct: 71  AAVEVKGIVALTPKAQQP-------LELVATKVKLLRDADLDFPIQ--KQGINLETLRDI 121

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             +  R + L   ++ R+ +   +        ++  + PI+T++  EGA +  V +  N 
Sbjct: 122 PHVRHRTNLLRATMLIRSTLAKEVNKYFDEHGYLYFNAPIITSNDGEGAGETFVVNDGNS 181

Query: 189 GSFY-----ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              +     A      Q      A GF + +  AP FR E   + +   EF+ ++ E++F
Sbjct: 182 KDPFFGTRKATLGVTGQLHAESYAIGFKKVYTFAPTFRAEHSNTKKHAAEFWMIEPEVAF 241

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RICYDDA 282
            E  D +   +++L+ V +     +     FL                      I Y DA
Sbjct: 242 YELKDAIKLADDMLKSVIKNTIKKHPAEFKFLNETVDKGLLERLNHFLKTKLSVIDYRDA 301

Query: 283 IRRYGTDKPDLRNPII---MHNVTEHFVHSEFRVFSKILSV 320
           I+     K    N  I   +   TEH  +   ++F+  ++V
Sbjct: 302 IKELAKVKDQFENQDIQFGLDLATEHERYISEKIFNGPVAV 342



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 79/266 (29%), Gaps = 41/266 (15%)

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMG 373
           F K+ +  P +       K         +    +   +    LA    +      +    
Sbjct: 208 FKKVYTFAPTFRAEHSNTKKHAAEFWMIEPEVAFYELKDAIKLADDMLKSVIKNTIKKHP 267

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE-----LGI-- 426
              K LN    + +  RL+         I  D        A  ++    +     L +  
Sbjct: 268 AEFKFLNETVDKGLLERLNHFLKTKLSVI--DYRDAIKELAKVKDQFENQDIQFGLDLAT 325

Query: 427 -----INCNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
                I+   F     +++FP             +   F M Q                 
Sbjct: 326 EHERYISEKIFNGPVAVINFP------------KSFKAFYMQQNDDNETVA--------- 364

Query: 481 QYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
            +DL+  G  E+  G  R    + +LQ    VGIS    +          + G     G 
Sbjct: 365 AFDLLVPGIGELIGGSQREVRYDKLLQRALEVGIS----QEELQWYLDLRRFGDSGSSGF 420

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMS 565
             G +R+VM + G  N+R+V  +P +
Sbjct: 421 GVGFERLVMYVTGVDNIRDVIPYPRT 446


>gi|18312919|ref|NP_559586.1| lysyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|18160412|gb|AAL63768.1| lysyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 482

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 71/290 (24%), Positives = 124/290 (42%), Gaps = 32/290 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  ++ +G V  +R H  ++F+D+ +     QV+A+P     E    +     + ++G 
Sbjct: 54  LGMTIKTAGRVSDIRRHPNVVFIDLYEDGARFQVMADPKLPLLE---HIWRGDFIGVEGP 110

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR----FLD 132
           ++             G   + A  I +L+ A + PLP +G+ +       +YR     LD
Sbjct: 111 LVKTQR---------GDYAVRAASIVLLAKAVQ-PLPEWGKVDRDSPFYMRYRSVAMVLD 160

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSF 191
           L    L   I  R ++I + R  M    F+E  TP+L        AR F          +
Sbjct: 161 L---QLRWRIAARAKLIQAFREAMWKRGFLEIPTPVLQPIYGGAAARPFTTKIWAIDEEW 217

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  +P+ Y +  + +GF + F+I P FR+ED  +   P EF+ L+   ++ +  DI+ 
Sbjct: 218 Y-LRISPELYLKRYIIAGFPKVFEIGPQFRNEDIDALHNP-EFWSLEAYQAYADYKDIMR 275

Query: 252 TMENVL---------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
             E V+          GV +        +  + RI   DA+R +    PD
Sbjct: 276 LTEEVVYEAVSSVLGTGVVKYRDWNINFNPPWRRITLHDALREFAGVDPD 325



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 51/145 (35%), Gaps = 23/145 (15%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           ++     E  ++MD+P     EE   +   H                        +++  
Sbjct: 359 LVEKKLVEPTFVMDYP-----EESTPLCKPHR----------------ERPGLVERFEAF 397

Query: 486 CNGFEIASGGIRNHMSEVMLQ--AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
             G E+A+     +      +          K+               GMPP GG+  G+
Sbjct: 398 VGGHEVANAYTELNDPVRQYEYFVREEELFPKDEAHPLDWDFVEELSFGMPPTGGVGIGV 457

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNF 568
           DR+ M++  A+++++V  +P+ +  
Sbjct: 458 DRLAMIITNAESIKDVIPYPIVKRG 482


>gi|290994146|ref|XP_002679693.1| lysyl-tRNA synthase [Naegleria gruberi]
 gi|284093311|gb|EFC46949.1| lysyl-tRNA synthase [Naegleria gruberi]
          Length = 551

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 99/258 (38%), Gaps = 16/258 (6%)

Query: 23  LSGWVHRVRPHGGIIFL----DIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           ++G +   R     +F        DH      +        E  ++        I+ ++ 
Sbjct: 91  IAGRIISKRKASSKLFFYTIRTNNDHSLHQVQIMTGSEYYDESNRTTDETNFSLINTILR 150

Query: 79  S---RSAETINANIITGQIELSAQKIEILSVAEELPLPV----FGEREYPESIRFKYRFL 131
                  +   A    G++ +  ++I +LS              G        RF+YR+L
Sbjct: 151 KGDIIGIKGFPAKSGKGELSIIPKQITLLSPCLHQLPHKVSYSEGTSLDDIEKRFRYRYL 210

Query: 132 DLRRD--TLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQ 188
           DL  +   L+   + R + ++ +R     + F+E  TPIL+  S    A+ F        
Sbjct: 211 DLLTNHEELYNIFLIRNKTMSFIRNFFTNKGFLEVETPILSEKSGGANAKPFETHLNALD 270

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
                L  AP+ Y + L+  G DR F+++  FR+E   S   P EF   +   +F + ++
Sbjct: 271 MDL-KLRIAPELYLKQLVIGGMDRVFELSKVFRNEGMDSTHNP-EFTSCEAYQAFADYNE 328

Query: 249 ILNTMENVLRGVFEEFSN 266
           +++  E   R +  E + 
Sbjct: 329 MMDMTEEFFRQIVTEING 346



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 5/111 (4%)

Query: 459 FTMPQGGMESLKGNDLL--SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK- 515
           F M      S         S+   +++L     E+ +     +  E   + F      K 
Sbjct: 432 FIMDHPVDLSPLSKSHRDSSLITERFELFIGTKELCNAYTELNDPEDQRERFRKQQEKKK 491

Query: 516 --EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             +          +A + G+PP GG   G+DR+VMLL   K++R+V LFPM
Sbjct: 492 QDDEAHENDEAFCKALEYGLPPTGGWGIGVDRLVMLLSNQKSIRDVLLFPM 542


>gi|320101107|ref|YP_004176699.1| aspartyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753459|gb|ADV65217.1| aspartyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 420

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 69/299 (23%), Positives = 127/299 (42%), Gaps = 25/299 (8%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCIDGLVM 78
           R+ GW+ R +  G ++ +++        VV      +   + + K +     LC +G   
Sbjct: 5   RICGWIIRKKAIGRVVIIEVSSDRVKPYVVVLKEEREPELYAVGKELDVGTALCFEGEEA 64

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                      +  +IE+ A+ IE L V         G+       R KYR+L +R    
Sbjct: 65  QEQKSVRGIEYVARKIEVYAKPIEPLPV------DTMGKVPALLDTRIKYRWLLVRNPVE 118

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                 R+ ++ + R  + +  F E  TP + A+  EG             ++  L Q+P
Sbjct: 119 KAIFRVRSAMLAAAREYLSSNGFTEVQTPKIVAAGAEGGATLFRVQYFENEAY--LSQSP 176

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVL 257
           Q +KQ+LMA GF R ++I P FR E   + R   E + +D+E  F+   +D+LNT+EN++
Sbjct: 177 QLFKQMLMA-GFTRVYEITPYFRAEKYNTTRHLNESWGIDVEQGFINSLEDVLNTLENLV 235

Query: 258 RGVFEEFS------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             + +  S            N    S  F R+ + +A+    ++  ++ +   + +  E
Sbjct: 236 AYIIDYVSRNNAEELEVLGVNLRKPSTPFKRLRFQEAVDILRSEGIEVSDTEDLSDQAE 294



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 26/153 (16%)

Query: 415 DARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           D  +   ++LG I+     +  +I+ FP+            +   + M +          
Sbjct: 288 DLSDQAEKKLGEIMAEKGHDLYFIVGFPW-----------SSTGFYYMREE--------- 327

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
              +   ++DL   G EIASGG R H  E +++A    G++       F     AF+ GM
Sbjct: 328 -NGVYTRKFDLDYRGLEIASGGQREHRYERLVEALREKGLNP----ASFDFYLEAFKYGM 382

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PPHGG   G++R++M +LG +NVRE  LF   +
Sbjct: 383 PPHGGFGLGVERLLMRMLGLENVREAILFVRDR 415


>gi|327354398|gb|EGE83255.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 582

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 71/406 (17%), Positives = 144/406 (35%), Gaps = 32/406 (7%)

Query: 4   YRTHSCGDLGVSDVGSF---------VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVAN 53
            R+ SC +                  V + G +   R  G  +IFLD+  +    Q++ N
Sbjct: 99  KRSISCDEFHSKYKDIKPNETAEQDLVVIYGRIQSTRIAGSKLIFLDLVQNGRKVQILCN 158

Query: 54  PDSACFE--IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEEL 110
                      +  +  + L   G V S   +        G++ ++A ++ ++++     
Sbjct: 159 QRHLDGTGVTPEKFKQFYHLLRRGDVFSAIGKPH--RTGRGELSVTASELPKLITPCLHD 216

Query: 111 PLPVFGEREYPESIRFKYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                 E+E        +R + L    T    +  R+ II  +R   + ++F+E  TPIL
Sbjct: 217 IPLRIKEQESSPY----HRHVQLLSSPTAADILRARSSIIQYIRTFFLDKSFMEVETPIL 272

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            + +    AR F   +        +L  AP+ + + L+  GFD+ F+I   FR+E     
Sbjct: 273 ASVAGGAVARPFETSATEFPDRPLSLRIAPELWLKRLVVGGFDKVFEIGQSFRNEGLDKT 332

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT 288
             P EF   +   +F + + +++  E++  G+ +   N N             A      
Sbjct: 333 HNP-EFTTCEFYHAFADLETLISLTESIFTGLSQHVHNLNQTLPTLSPTTASFAAPFSRL 391

Query: 289 DKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           D        + H + +            IL +   +E    P           DR++   
Sbjct: 392 DFIPDLEAAMGHKLPDFASTPTEEAAKIILDL---FEQLHHPPPTNATLPRLLDRLSSIY 448

Query: 349 RSQGQPGLAYIFWRLDESGNVAGMGPVAK-HLNIVNTEAIRVRLDM 393
                    +I        +   + P++K  ++  N + +  R ++
Sbjct: 449 LEPQCKNPTFIV------NHPECLSPLSKSFIHPANGQVVTARAEL 488



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 6/94 (6%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG------GLYRA 528
             +   + +L  +  E+ +     +      + F      +       G         +A
Sbjct: 479 GQVVTARAELFVDKREMVNMYEEENSPFEQRRKFEIQLGFQGQAVEEEGEGKMDESYVQA 538

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            Q G+PP GG   G+DR+VML  GA  + +V  F
Sbjct: 539 LQWGLPPTGGWGCGVDRLVMLFTGAGRIGDVLSF 572


>gi|302387684|ref|YP_003823506.1| aspartyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302198312|gb|ADL05883.1| aspartyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 443

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 108/262 (41%), Gaps = 10/262 (3%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  VR+ G VH +R  G + F+ +R   G+ Q V       F+I   ++ E  + + G+V
Sbjct: 25  GRTVRMEGSVHTIRDMGEVAFVILRKAEGLVQCVYEEGKTDFDI-SLLKEESAVRVTGVV 83

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                      I    I+L +Q  E L VA         +       +   R + LR   
Sbjct: 84  SKEERAPYGFEIRLLGIDLLSQPAEALPVA-----ISKWKLNTSLETKLALRPITLRNPM 138

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  +  I+   R  + ++NF E  TP + A   EG  +       N+ +   L Q+
Sbjct: 139 ERAKFRLQEGIVRGFRDFLHSQNFTEIRTPKIVARGAEGGSNVFKLDYFNKKAE--LGQS 196

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMENV 256
           PQ YKQ  M   +DR F++AP FR E   + R   E+  +D EM +++  ++I+     +
Sbjct: 197 PQFYKQ-TMVGVYDRVFEVAPVFRAEKHNTTRHLNEYTSMDFEMGYIDGFEEIMEMETAM 255

Query: 257 LRGVFEEFSNGNTVSNNFLRIC 278
           L+  F             L++ 
Sbjct: 256 LQYTFGLLCEDYEAELQMLKVS 277



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF             D     +  +DL+  G E+ 
Sbjct: 329 DFVFVTHYP------------SKKRPFYAMDD------PADPKFTLS--FDLLFKGLEVT 368

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H  + +L+     G++ E + +        FQ GMPPHGG+  G++R+ M LL 
Sbjct: 369 TGGQRIHDYDTILKKMEARGMNPEDISS----YLMIFQYGMPPHGGLGIGLERLTMRLLD 424

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+RE +LFP      + 
Sbjct: 425 EGNIRETTLFPRDVTRLEP 443


>gi|145530345|ref|XP_001450950.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418583|emb|CAK83553.1| unnamed protein product [Paramecium tetraurelia]
          Length = 469

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/308 (18%), Positives = 98/308 (31%), Gaps = 34/308 (11%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY---GITQVVANPDSACFE 60
           YR     + G   +G  V ++GW   VR    + F+++ D     G+  VV +  +   +
Sbjct: 6   YRIQELLNAGEGYIGQTVTVAGWARTVRDQKNLCFIELNDGTSFGGLQIVVEDKIANFEQ 65

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +AK+    +               I+ N              I+  A+    P+    + 
Sbjct: 66  VAKTKYRIFTQSDRKHCKESCQRIIDRN-----------AFVIIGQADPEEYPMAKGVQK 114

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           PE++R K   L  R +        R  +  +          +   TPI+T S  EGA + 
Sbjct: 115 PETLRQK-AHLRPRGNFFSAVTRIRNNLAYATHVFFQNNGCLYIHTPIITGSDCEGAGEM 173

Query: 181 LVPSRVNQGSFYALPQ-------------------APQQYKQLLMASGFDRYFQIAPCFR 221
              S +       +PQ                      Q +           +   P FR
Sbjct: 174 FRISTIFDNDVSKIPQIKGKVDTTQDFFKKEVNLTVSGQLQVEHFCISMSNVYTFGPTFR 233

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
            E   + R   EF+ ++ E +F +  D +   E  ++         N     FL      
Sbjct: 234 AEKAHTHRHLAEFWMIEPEFAFADLFDNMEAAEGYVKFCINYILQNNMDDLQFLDKRVKP 293

Query: 282 AIRRYGTD 289
            +  Y  D
Sbjct: 294 GLIDYLKD 301



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 17/124 (13%)

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P + ++            F M        K  D          L+    E+  G  R   
Sbjct: 356 PVFLYD-----YPKEIKAFYM--------KVTDDGKCVRAMDMLIPQVGELIGGSQREER 402

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            +V+ Q     G+        +G      + G  PH G   G +R+VM++ G +N+R+V 
Sbjct: 403 YDVLAQRIKECGLKL----EDYGPYMDLRKYGTVPHCGFGLGFERLVMMVTGVENIRDVI 458

Query: 561 LFPM 564
            FP 
Sbjct: 459 PFPR 462


>gi|119963343|ref|YP_945986.1| lysyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119950202|gb|ABM09113.1| lysyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 509

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/293 (20%), Positives = 111/293 (37%), Gaps = 19/293 (6%)

Query: 5   RTHSCGDLGVSDV--------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD 55
           RTHS  ++             G  V ++G V  VR  G + F  +++       V     
Sbjct: 46  RTHSLSEIREKYAHLEADETTGDTVGVTGRVVFVRNTGKLCFATLQEGGVDGKGVRLQAM 105

Query: 56  SACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   + +   ++W   +D G  +    E I++    G++ + A    + S A      +
Sbjct: 106 LSLANVGEEALADWKALVDLGDHVFIKGEVISSR--RGELSVMADSWSMASKALRPLPVL 163

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-AS 172
               E  E  R + R++DL  RD   + + +R  I  S+R  +    ++E  TPIL    
Sbjct: 164 --HAELNEETRVRQRYVDLMVRDEAREMVYRRAAITRSVRDTLDRHGYVEVETPILQLVH 221

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F             L  A + + +  +  G DR + +   FR+E   S   P 
Sbjct: 222 GGATARPFETHMNAFDQKM-TLRIATELFLKRAVVGGIDRVYDMGRVFRNEGVDSTHSP- 279

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           EF  L+   ++ +Q  +   M+ ++  V  +     T+  +   I  D     
Sbjct: 280 EFTTLECYEAWADQFVMAERMKEIILNVA-DVVGTRTIQTDAGEINLDGEWAW 331



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 5/90 (5%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
               +DL+  G E  +         +  +  +         +           RA + G 
Sbjct: 414 LIEAWDLIIGGMERGTAFSELIDPVIQRERLTEQSRRSAAGDEEAMQLDEDFLRALEYGA 473

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           PP GGI  GIDR+VML  GA  +RE  LFP
Sbjct: 474 PPMGGIGLGIDRLVMLFTGAG-IRETILFP 502


>gi|325961761|ref|YP_004239667.1| lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323467848|gb|ADX71533.1| lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 521

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/293 (19%), Positives = 109/293 (37%), Gaps = 18/293 (6%)

Query: 5   RTHSCGDLGVSDV--------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD 55
           RTHS  ++             G  V ++G V  +R  G + F  +++             
Sbjct: 57  RTHSLAEIREKYAHLQADDTTGDIVGVTGRVVFIRNTGKLCFATLQEGGTDGKGTRLQAM 116

Query: 56  SACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   + +   ++W   +D G  +    E I++    G++ + A+   + S A      +
Sbjct: 117 LSLANVGEEALADWKALVDLGDHVFIKGEVISSR--RGELSVMAESWSMASKALRPLPVL 174

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
               +  E  R + R++DL  RD   + +  R  I  S+R  +   N++E  TPIL    
Sbjct: 175 --HADLNEETRVRQRYVDLMVRDEAREMVYTRAAITRSIRETLFRHNYVEVETPILNLVH 232

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F             L  A + Y +  +  G DR + +   FR+E   S   P 
Sbjct: 233 GGALARPFETHMNAFDQKM-TLRIATELYLKRAVVGGIDRVYDMGRVFRNEGVDSTHSP- 290

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           EF  L+   ++ +Q  +   ++ ++    +    G  +      I  D     
Sbjct: 291 EFTTLECYEAWADQFVMAERIKEIILDAADAVGAGRVLQTEAGEINLDGEWEW 343



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 51/151 (33%), Gaps = 28/151 (18%)

Query: 419 HIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +A EL   I+        ++ D+P        + +   H                    
Sbjct: 386 KLAVELFGEIVEPTLLNPTFVYDYP-----PSAQPLARPHR----------------EDG 424

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
                +DL+  G E  +         +  +  +         ++          RA + G
Sbjct: 425 RLIEAWDLIIGGMERGTAFSELIDPVIQRERLTEQSRHAAAGDDEAMQLDEDFLRALEYG 484

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            PP GGI  GIDR+VML  GA  +RE  LFP
Sbjct: 485 APPMGGIGLGIDRLVMLFTGAG-IRETILFP 514


>gi|123418390|ref|XP_001305315.1| asparaginyl-tRNA synthetase family protein [Trichomonas vaginalis
           G3]
 gi|121886827|gb|EAX92385.1| asparaginyl-tRNA synthetase family protein [Trichomonas vaginalis
           G3]
          Length = 624

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 69/338 (20%), Positives = 124/338 (36%), Gaps = 28/338 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
              R+ GWVH++  HGGI+FL +RD  G  QV+          A ++  E  + + G V 
Sbjct: 204 ERQRVFGWVHKLSRHGGIMFLTLRDGTGFLQVILEGILTQTTSALTINREATVMVVGKVR 263

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                        G  EL+A   E++  A      +      P  +    R L LR +  
Sbjct: 264 EDKRAV-------GGKELAADYWEMIGNAPSDFDTLTRPDLTP-DLLLDNRHLVLRSEFA 315

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
              +  R  +   +R      +  E   P L  +  EG           Q ++  L Q+ 
Sbjct: 316 STTMKVRDHLTRIIRENFYKHDCTEVVCPCLVQTQCEGGATLFGLDFYGQKAY--LTQSS 373

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           Q Y +   AS     F I P FR E  ++ R   EF  ++ E  F++ D++++ +E+++ 
Sbjct: 374 QLYLETCCAS-MGDVFCIEPSFRAEKSKTPRHLCEFTHIEAEYPFIDFDELMSRIEDMVI 432

Query: 259 GV--------FEEFS-----NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            V        F++F      +   +   F RI + +A+            P    ++ + 
Sbjct: 433 AVVNGLLESEFKDFILKHNPDLKPLKKPFKRITHKEALEF----CRTHDIPKDPEHLEDK 488

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
           +   +        ++           K     +AF  +
Sbjct: 489 WKDDDDIPELAERTLVDTIGELCFMTKFPAAIKAFYMK 526



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 13/122 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
           K   A   F M +            +      DL+  G  EI  G +R    + ++ A+ 
Sbjct: 515 KFPAAIKAFYMKRC--------PEDNSLTESCDLLVPGVGEIVGGSMRLECYDELMNAYL 566

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G+        +       + G  PHGG   G +R+V  +L   ++RE  L+P   N  
Sbjct: 567 VNGLDPAP----YYWYVDQRRYGHFPHGGFGLGTERLVRWILKIGHIRETCLYPRIMNRA 622

Query: 570 DL 571
             
Sbjct: 623 TP 624


>gi|226293889|gb|EEH49309.1| asparaginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 597

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 66/352 (18%), Positives = 121/352 (34%), Gaps = 33/352 (9%)

Query: 12  LGVSD---VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           L  SD    G+ VR+ G VH +R    +IF+ + D YG+ Q +   D        ++  E
Sbjct: 100 LRPSDGDTPGTRVRVVGRVHHLRSQKDMIFVTLSDGYGLLQCIFTGDLVKTYDMMTLTLE 159

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRF 126
             + I G + +        +      EL A    I+  A  ++  +     R+      +
Sbjct: 160 TSIAIHGEMRAVPPMNHAYDDR----ELHADFFTIIGRAAGDKEAITTRVARDSDPHTLY 215

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR +T    +  R   + + R     +  +E + P +  +  EG          
Sbjct: 216 DNRHLVLRGETSSSVMKVRAATLRAFRKAFEEKGMLEVTPPAMVQTQVEGGSTLFEFDYY 275

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            + ++  L Q+ Q Y +  + S     F + P FR E   + R   E+  ++ E+ F+  
Sbjct: 276 GEKAY--LTQSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEYTHVEAELDFISF 332

Query: 247 DDILNTMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKP- 291
            D+L+ +E+++  V +                         F R+ Y +AI         
Sbjct: 333 TDLLDHLEDMICRVIDLVLSEPLIAQYVKNLNPTFTLPPRPFKRMKYAEAIEWLVEHNIP 392

Query: 292 -----DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
                  R    +    E    ++       L+  P         K     R
Sbjct: 393 NEEGQPHRFGDDIAEAAER-KMTDMLSRPIFLTHFPTEIKAFYMKKDPDDPR 443



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 7/115 (6%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
           +  F  +  T  +        +D    ++   D++  G  EI  G +R    + ++ A+ 
Sbjct: 419 RPIFLTHFPTEIKAFYMKKDPDDPRVTESV--DVLMPGVGEIVGGSMRMDDWDELMAAYK 476

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             G+        +       + G  PHGG   G++R +  + G   VRE  L+P 
Sbjct: 477 REGMDPSP----YYWYTDQRKYGTSPHGGYGLGLERFLAWMCGRYTVRECCLYPR 527


>gi|238809945|dbj|BAH69735.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 456

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 101/277 (36%), Gaps = 16/277 (5%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSE 68
           +         + +  WV   R +  I F+ I D   +   QV    +   F+    +   
Sbjct: 15  EKSKEFKNKTLEIKAWVTSNRGNKKIRFISINDGSTVQSLQVTCKGEKFDFDKLDQIHLG 74

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G+V                +EL A K+++L  A+        ++          
Sbjct: 75  AAVEVKGIVALTPKAQQP-------LELVATKVKLLRDADLDFPIQ--KQGINLETLRDI 125

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             +  R + L   ++ R+ +   +        ++  + PI+T++  EGA +  V +  N 
Sbjct: 126 PHVRHRTNLLRATMLIRSTLAKEVNKYFDEHGYLYFNAPIITSNDGEGAGETFVVNDGNS 185

Query: 189 GSFY-----ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              +     A      Q      A GF + +  AP FR E   + +   EF+ ++ E++F
Sbjct: 186 KDPFFGTRKATLGVTGQLHAESYAIGFKKVYTFAPTFRAEHSNTKKHAAEFWMIEPEVAF 245

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
            E  D +   +++L+ V +     +     FL    D
Sbjct: 246 YELKDAIKLADDMLKSVIKNTIKKHPAEFKFLNETVD 282



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 79/266 (29%), Gaps = 41/266 (15%)

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMG 373
           F K+ +  P +       K         +    +   +    LA    +      +    
Sbjct: 212 FKKVYTFAPTFRAEHSNTKKHAAEFWMIEPEVAFYELKDAIKLADDMLKSVIKNTIKKHP 271

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ---ELGI---- 426
              K LN    + +  RL+         I  D        A  ++       E G+    
Sbjct: 272 AEFKFLNETVDKGLLERLNHFLKTKLSVI--DYRDAIKELAKVKDQFENQDIEFGLDLAT 329

Query: 427 -----INCNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
                I+   F     +++FP             +   F M Q                 
Sbjct: 330 EHERYISEKIFNGPVAVINFP------------KSFKAFYMQQNDDNETVA--------- 368

Query: 481 QYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
            +DL+  G  E+  G  R    + +LQ    VGIS    +          + G     G 
Sbjct: 369 AFDLLVPGIGELIGGSQREVRYDKLLQRALEVGIS----QEELQWYLDLRRFGDSGSSGF 424

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMS 565
             G +R+VM + G  N+R+V  +P +
Sbjct: 425 GVGFERLVMYVTGVDNIRDVIPYPRT 450


>gi|157872107|ref|XP_001684602.1| lysyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68127672|emb|CAJ05785.1| putative lysyl-tRNA synthetase [Leishmania major strain Friedlin]
          Length = 536

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 52/236 (22%), Positives = 106/236 (44%), Gaps = 13/236 (5%)

Query: 33  HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITG 92
            GGI+F+ IR      QV+   + +  +    +R+       G ++  +   +      G
Sbjct: 1   MGGILFITIRSGEAQLQVLRQVNESFTKA--DLRAFASTLHTGDILGATG--VPGRTAKG 56

Query: 93  QIELSAQKIEILS---VAEELPLPVFGER--EYPESIRFKYRFLDLRRDT-LHKNIVKRT 146
           ++ L A +  IL+     ++   P            I+++YRF+D+  +  + ++  KR 
Sbjct: 57  ELSLYATEASILAPYVCTDQALCPDLKGFVPLADTGIKYRYRFVDMMSNPSVVQHFRKRH 116

Query: 147 RIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
            I  ++R  + A +F+E  TP+L + +S   A+ F+     N    + L  AP+ + +  
Sbjct: 117 AITRALRDFLDARSFVEVETPVLHSVASGANAKPFVTHHNANDADLF-LRVAPELHLKQC 175

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           +  G +R ++I   FR+ED      P EF   +   ++   +D++   E +LR + 
Sbjct: 176 VVGGMERVYEIGRVFRNEDADRSHNP-EFTTCEFYAAYHTYEDLMTMTEEILRHLA 230



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 25/135 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           E  ++ D P +                 M    ME           + +++L  NG E  
Sbjct: 325 EPTFVTDHPLF-----------------MSPLAMEQRA----RPGLSARFELFINGTEYC 363

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +     +  +     F    + ++  ++          +A Q G+PP  G   GIDR+VM
Sbjct: 364 NAYSELNDPQEQYYRFQQQLLDRQTGDDEAMALDETFLKALQVGLPPTAGWGMGIDRVVM 423

Query: 549 LLLGAKNVREVSLFP 563
           LL G+  +RE  LFP
Sbjct: 424 LLNGSSTIREDILFP 438


>gi|15807637|ref|NP_294994.1| asparaginyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 452

 Score =  151 bits (382), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 53/300 (17%), Positives = 101/300 (33%), Gaps = 14/300 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWV 70
              +G  V +  W+      G I FL +RD  G  Q      +     FE AK +  E  
Sbjct: 16  KQHIGQSVEVLAWLQDKSGKGKIQFLKLRDGSGFVQGTVFKGDVAEDVFEAAKRLTQEQA 75

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G V +            G +ELS + + ++S  E +       +E+       +R 
Sbjct: 76  VRVTGEVRADER-------APGGVELSVRDLSVIS--ENVGEYPITPKEHGIEFLMDHRH 126

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR       +  R  +   +      E F+    P  T ++ EG  +        +  
Sbjct: 127 LWLRHRRPWAIMRVRDCVQRGIVEFFHGEGFVRFDAPFFTPNAAEGTTELFEIDLFGEDK 186

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            Y L Q  Q +     A    +     P FR E  ++ R   EF+ ++ E++     + +
Sbjct: 187 AY-LSQTGQLH-AEAGAFALRQGLHFGPTFRAEKSKTRRHLLEFWMVEPEVAPSSHAENM 244

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
              E ++  +  +  +        L             + P +     +  + +H    +
Sbjct: 245 ALQERMVSHLARKVLSECAAELEMLGRDVSKLXGAAEGNYPRVTYTEALEIIRQHIEDKD 304



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 37/117 (31%), Gaps = 14/117 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAF 508
           K   A   F M           D         D++      EI  G  R H  E++    
Sbjct: 342 KYPAAIKAFYMQPD------PEDPRVALCD--DMIAPEGYGEIIGGSERIHDYELLKSRI 393

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
              G+        F       + G  PH G   G++R +  + G  ++RE   FP  
Sbjct: 394 EEQGLPL----EAFDWYLDLRRVGSMPHAGYGMGLERFIAWMTGIDHIREAIPFPRM 446


>gi|190345858|gb|EDK37816.2| hypothetical protein PGUG_01914 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 432

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 64/316 (20%), Positives = 120/316 (37%), Gaps = 23/316 (7%)

Query: 36  IIFLDIRDHYGITQVVANPD-----SACFEIAKSVRSEWVLCIDGLVMSRSAETINANII 90
           + FL +R    + Q +   D         + A S+  E ++ + G V        +A + 
Sbjct: 1   MAFLTLRQQSELIQCLIKADGEQVSKQMVKFAGSINLESIVVVHGEVRKVEEPIKSATV- 59

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGERE-------------YPESIRFKYRFLDLRRDT 137
               E+   KI ++S A E    +  +                    R   R +DLR  T
Sbjct: 60  -QDAEIHVSKIYVISAAPEQLPILIEDASRSDAEAEAAGLPVVNLDTRLDARVIDLRTTT 118

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  +  +    R  +  + F+E  TP L  ++ EG  +    +     ++ A  Q+
Sbjct: 119 NQAIFKIQAGVGKLFREFLDKKGFVEIHTPKLLGAATEGGANVFEVTYFKSSAYLA--QS 176

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENV 256
           PQ YKQ L+A+ F++ +++AP FR E+  + R   EF  +D+EM+F E   ++L+ + ++
Sbjct: 177 PQFYKQQLIAADFEKVYEVAPVFRAENSNTHRHMTEFMGMDLEMTFEEHYHEVLDNLADL 236

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
              +F E  +        +R  Y     +   D   +R               +   F  
Sbjct: 237 FVYIFSELKSRYAKEIATVRRQYPMEEFKLPKDGKMVRIEFKEGVAMLREAGKDVGDFDD 296

Query: 317 ILSVNPGYEVWAIPAK 332
           + + N       +  K
Sbjct: 297 LSTENEKLLGKLVREK 312



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 57/156 (36%), Gaps = 24/156 (15%)

Query: 415 DARNHIAQELGIINCNCFEFCW-IMD-FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
           D      + LG +    ++  + I+D FP                 +TMP          
Sbjct: 296 DLSTENEKLLGKLVREKYDTDFYILDKFPL-----------AIRPAYTMPDPEDPRY--- 341

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                 +  YD    G EI SG  R H  E++ +   ++ I              AF  G
Sbjct: 342 ------SNSYDFFMRGEEIMSGAQRIHDPELLKKRMIDLDIDPNA--PGLSDYIDAFTYG 393

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            PPH G   G++R++M  L  KN+R  SLFP     
Sbjct: 394 CPPHAGGGIGLERVLMFYLDLKNIRRASLFPRDPKR 429


>gi|260781616|ref|XP_002585901.1| hypothetical protein BRAFLDRAFT_256666 [Branchiostoma floridae]
 gi|229270966|gb|EEN41912.1| hypothetical protein BRAFLDRAFT_256666 [Branchiostoma floridae]
          Length = 423

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 51/316 (16%), Positives = 113/316 (35%), Gaps = 46/316 (14%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           GWV  +R    ++FL + D   +  +                        G  ++     
Sbjct: 1   GWVRSIRAQKDVLFLHLNDGSCLAHLQVVGTP---------DMGSSGLSYGSAVAVEGRL 51

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
             +      +EL A ++E++        P   ++ +      ++  L  R ++    +  
Sbjct: 52  FPSAHPGQDVELHADRLEVIGSCNVKEFPFKAKKRHTMEYSRQFPHLRARTNSFSALLRI 111

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP--------SRVNQGSFYALPQ 196
           R++  +++      E +IE  TP+++++  EGA +               +     A   
Sbjct: 112 RSQAASAIHKFFQDEGYIEVHTPVISSNDCEGAGELFQVKISQDSGKDTKHFFDVPAFLT 171

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMEN 255
              Q +  +MAS   R +   P  + E         EFY ++ E++F  +Q+D++  +E 
Sbjct: 172 VSGQLQLEVMASALSRVYVFGPTLQQESC-----LSEFYMVEAELAFTQQQEDVMEVIEM 226

Query: 256 VLRGVFEEFSNGNTVSNN---------------------FLRICYDDAIRRYGTDKPDLR 294
           +++   E+         +                     F+R+ Y +AI+    +  + +
Sbjct: 227 MVKQPTEQILALCPEDLHLFYKFVSPGHRVIVENILTSRFIRMTYTEAIQILKKNSENFQ 286

Query: 295 N-PIIMHNV-TEHFVH 308
             P   H++  EH  H
Sbjct: 287 FTPEWGHDLQKEHERH 302



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 27/137 (19%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             ++ DFP     +E K       PF          + ND     A  +DL+     E+ 
Sbjct: 311 PVFVTDFP-----KELK-------PFYA--------RDNDDDKTVA-AFDLLVPEVGELF 349

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G +R    E++      +G+S     N +       + G  PHGG   G +R +  +LG
Sbjct: 350 GGSLREERLEILQDRLDRLGLS-----NSYQWYLDLRRYGSVPHGGFGMGFERYLQCILG 404

Query: 553 AKNVREVSLFPMSQNFC 569
             ++R+V  FP   + C
Sbjct: 405 VPHIRDVIPFPRFPHSC 421


>gi|293364012|ref|ZP_06610748.1| lysine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552502|gb|EFF41276.1| lysine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 492

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/334 (17%), Positives = 123/334 (36%), Gaps = 35/334 (10%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACF 59
            ++   +  +L V    + ++ SG +  +R      F+ I+D++G  QV  N   +    
Sbjct: 46  KKFADKTKDELEVEK--NSIKASGRIVSMRGP----FILIKDYHGKIQVYFNKKENENLA 99

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +I ++     ++ + G               T ++ + +  IE+L+ A + PLP      
Sbjct: 100 KIVETFDLGDIISVQG---------FAMKTHTNEVSIRSVNIELLTKALK-PLPDKYHGL 149

Query: 120 YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
                R++ R++DL  +   KN    RT++I+ +R    +  ++E  TP L       A 
Sbjct: 150 SDVEERYRRRYVDLIVNEETKNTFWTRTKVISEIRRYFDSLEYMEVETPFLHDYISGAAA 209

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                        + L  A +   + L+  G DR ++I   FR+E   +   P EF  ++
Sbjct: 210 KPFKTHHNALDQEFVLRIATEIPLKKLLVGGIDRVYEIGRIFRNEGIDTTHNP-EFTSIE 268

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              ++   + ++   E + + + +  +                 I      + DL  P  
Sbjct: 269 FYEAYSNLEGMMQRTEALFKQLCKRLNKT---------------IFLNNGVEIDLSKPFS 313

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
             N+ +    +    F +I              K
Sbjct: 314 RLNMVDAVSEATGVNFREISFEKACDIAKKHKIK 347



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 7/148 (4%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           IA++  I     ++   I++   +E   EEK I          +    + K  D      
Sbjct: 340 IAKKHKIKIEKFYKLGHIVNC-LFEELIEEKLIQPTFVTGHPIEISPLTAKSKDPR--FT 396

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPP 535
            + +L  N  E A+           L+ F      K    +           A + GMPP
Sbjct: 397 ERAELFINKKEYANMYTELSDPIDQLERFEEQLNEKNSGNDEANDIDYDFIDALEYGMPP 456

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG   GIDR++MLL   +++R+V LFP
Sbjct: 457 AGGCGIGIDRLIMLLSEKESIRDVLLFP 484


>gi|291546775|emb|CBL19883.1| aspartyl-tRNA synthetase, archaeal type [Ruminococcus sp. SR1/5]
          Length = 443

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/277 (21%), Positives = 106/277 (38%), Gaps = 13/277 (4%)

Query: 5   RTHSCG---DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           +T  C     L  S       + G +H +R  G + F+ +R   G+ Q V   D     I
Sbjct: 9   KTRECAWDVLLSESMKDQEATVEGAIHSIRNMGDVAFVILRKKEGLFQTVYENDKTNVSI 68

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
              ++    + + G +           +    +E+ +   E L +A +       +    
Sbjct: 69  -HDLKEAMCVRLTGTLHEEERAPHGRELRISHVEILSSPAESLPLAID-----KWKLNTS 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              +  YR + LR          +  ++ + R  +  + F E  TP + A   EG  +  
Sbjct: 123 LEAKLNYRPIALRNVQERAKFKIQEALVRAFRDYLYEKGFTEIHTPKIGARGAEGGANLF 182

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
             S  ++ +  A  Q+PQ YKQ +M   FDR F+  P FR E   + R   E+  LD EM
Sbjct: 183 KLSYFHKPAVLA--QSPQFYKQ-MMVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEM 239

Query: 242 SFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
            ++   +DI+      L+   E          + L++
Sbjct: 240 GYINGFEDIMEMETGFLQYAVELLKKDYAHELSILKV 276



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF            +         +DL+  G E+ 
Sbjct: 329 DFVFVTHYP------------SKKRPFYAM--------DDPSDEKFTLSFDLLFKGLEVT 368

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H  +++    +  G+ +E +E         F+ GMPPHGG+  G++R+ M +LG
Sbjct: 369 TGGQRIHDYQMLKDKIAARGMDEEGMEQ----YLDTFKHGMPPHGGLGIGLERLTMQILG 424

Query: 553 AKNVREVSLFPMSQNFCDL 571
            +NVRE  LFP   N  + 
Sbjct: 425 EENVRETCLFPRDMNRLEP 443


>gi|68070733|ref|XP_677278.1| asparagine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56497329|emb|CAH99886.1| asparagine--tRNA ligase, putative [Plasmodium berghei]
          Length = 574

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 69/457 (15%), Positives = 139/457 (30%), Gaps = 94/457 (20%)

Query: 17  VGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCI 73
           +   V + GW   VR  GG   F+++ D      +    N +   ++             
Sbjct: 82  IDQLVVVCGWSKAVRKQGGRFCFVNLNDGSCHLNLQIVVNQNIDNYDKLLKCGIGCCFRF 141

Query: 74  DGLVMSRSAETINANIITGQ-IEL-----SAQKIEILSVAEELPLPVFGEREYPESIRFK 127
            G ++    +      +  + +EL     S    EI     +       ++ + +    +
Sbjct: 142 TGTLILSPVQNTEKKGLLNENVELTLTDNSIHSFEIYGENLDPQKYPLSKKNHGKEFLRE 201

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV- 186
              L  R   +   +  R  ++ S      +  FI   TP++TAS  EG  +    + + 
Sbjct: 202 VAHLRPRSYFISSVMRIRNALMLSTHLFFQSRGFICIHTPLITASDCEGGGEMFTVTTLF 261

Query: 187 -------------------------------------------NQGSFY---ALPQAPQQ 200
                                                       +  F+   A      Q
Sbjct: 262 NEHGDISSIPKTKKKINNNETGKREDKNTNELETNNTNQYIVDFKKDFFSKQAFLTVSGQ 321

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
                + S     +   P FR E+  + R   EF+ ++ EM+F +  D +   E  ++  
Sbjct: 322 LSLENLCSSMGDVYTFGPTFRAENSHTSRHLAEFWMIEPEMAFADIYDNMELAEAYIKYC 381

Query: 261 FEEFSNGNTVSNN---------------------FLRICYDDAIRRYGTDKPDLRNPII- 298
                N N                          F +I Y +AI        +   P+  
Sbjct: 382 IRYVLNNNFHDIYYFEENVEKGLIERLKNILNDDFAKITYTNAIELLTKYSNNFDIPVKW 441

Query: 299 -MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
            M   +EH      ++F K + V    +            +AF  ++N+         +A
Sbjct: 442 GMDLQSEHERFISEQIFKKPVIVYNYPKDL----------KAFYMKLND-----DNKTVA 486

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
            +   + + G V G      +L +++   I  +L+++
Sbjct: 487 AMDVLVPKIGEVIGGSQREDNLELLDKMIIEKKLNIE 523



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +K ND     A    LV    E+  G  R    E++ +      ++       +    + 
Sbjct: 476 MKLNDDNKTVAAMDVLVPKIGEVIGGSQREDNLELLDKMIIEKKLNI----ESYWWYRQL 531

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            + G  PH G   G +R++ML+ G  N+++   FP 
Sbjct: 532 RKYGTHPHSGFGLGFERLIMLVTGVDNIKDTIPFPR 567


>gi|257068467|ref|YP_003154722.1| lysyl-tRNA synthetase (class II) [Brachybacterium faecium DSM 4810]
 gi|256559285|gb|ACU85132.1| lysyl-tRNA synthetase (class II) [Brachybacterium faecium DSM 4810]
          Length = 502

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 110/272 (40%), Gaps = 20/272 (7%)

Query: 6   THSCGDLGVS--DVG------SFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDS 56
           T +  ++      +G        V ++G V   R  G + F+ ++D  G   Q++A+   
Sbjct: 42  TATIAEVRAKYGHLGAGEETKDEVGVAGRVVFQRNTGKLAFITLQDGAGQRLQIMASQAV 101

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              +    ++++  L        R   +       G++ + A   ++   A+ +      
Sbjct: 102 IGEQRLADLKADVDLGDHVFFHGRVGASRR-----GELSIFADTWQM--AAKAVRPLPVL 154

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSP 174
             +  E  R ++R++DL      ++ V+ R  +++S+R       ++E  TP+L    S 
Sbjct: 155 HADLSEESRVRHRYVDLIVRQEARDTVRQRAEVMHSLRTSFHDREYVEIETPMLQVIPSG 214

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F+          Y L  AP+ Y +     G ++ F+I   FR+E   S   P EF
Sbjct: 215 AAARPFVTHMHAFDLDLY-LRIAPELYLKRAAVGGLEKVFEINRNFRNEGADSTHSP-EF 272

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
             L+   ++ + + I +    +++   E  + 
Sbjct: 273 AMLEAYQAYGDYNTIGDLTRTLVQEAAERATG 304



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 52/154 (33%), Gaps = 28/154 (18%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                 + +    +  +  E  ++ DFP      E   +   H                 
Sbjct: 367 GKLVEELFEH--QVGDHLHEPTFVRDFPV-----ETSPLVREHR---------------- 403

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
                  ++DL   GFE+ +G        +  + F+         ++           A 
Sbjct: 404 STPGVVEKWDLYVRGFELGTGYSELVDPVIQRERFAQQAELAAQGDDEAMRLDEDFLEAM 463

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +  +PP GG+  G+DR++M L G   +RE  LFP
Sbjct: 464 EHALPPTGGMGMGVDRLLMALTGLG-IRETILFP 496


>gi|332669095|ref|YP_004452103.1| lysyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332338133|gb|AEE44716.1| lysyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 511

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 109/273 (39%), Gaps = 18/273 (6%)

Query: 5   RTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPD 55
           RTH+   +                V ++G V  +R  G + F  ++D  G   Q + +  
Sbjct: 48  RTHTIAQVRAEHPDLEPGTETQDEVGVAGRVVFLRNTGKLCFAMLQDGEGNRLQAMLSLR 107

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
               E   + +++  L   G  +      + +   TG++ + A    + + A      V+
Sbjct: 108 EVGEERLAAFKTDVDL---GDHVFVHGRVVASR--TGELSVFADAWAMAAKAIRPLPNVY 162

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
              E  E  R + R++DL  +   +++V+ R  ++ S+R  +    F+E  TP+L     
Sbjct: 163 EGAELSEEARVRQRYVDLIVNQRSRDMVRTRAAVLRSVRDNLHRRGFLEVETPMLQVRPE 222

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F           + L  AP+ + +     G +R F+I   FR+E   +   P E
Sbjct: 223 GAAARQFETHMNAFDIPLF-LRIAPELFLKRAAVGGVERVFEINRNFRNEGVDATHSP-E 280

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           F  L+   ++ + D I    +++++    +   
Sbjct: 281 FAMLEAYEAYGDYDTIAELTQDLVQTAARDAFG 313



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 11/127 (8%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDL------LSIKAFQYDLVCNGFEIASGGIRNHM 500
           EE  +    H+           ++ + L       +    ++DL   G E+A+G      
Sbjct: 380 EELWEHHVGHHLTAPTFVRDFPVETSPLVRDHRHKAGLVEKWDLYVRGMELATGYSELVD 439

Query: 501 SEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
             +  Q F    +     ++           A +  MPP GG+  GIDR+++ L G   +
Sbjct: 440 PVIQRQRFEAQALLAARGDDDAMRIDEDFLTAMEFAMPPSGGMGMGIDRLLIALTGLG-I 498

Query: 557 REVSLFP 563
           RE  LFP
Sbjct: 499 RETILFP 505


>gi|218884222|ref|YP_002428604.1| aspartyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765838|gb|ACL11237.1| aspartyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 420

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 67/254 (26%), Positives = 109/254 (42%), Gaps = 13/254 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCIDGLVM 78
           R+ GW+ R +  G II +++        V+      +   F++   +     LC +G   
Sbjct: 5   RICGWIIRKKSIGRIIIIEVSSDSVKPSVLVLKEEREPELFKLGMEIDIGTALCFEGEEA 64

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                      I  +IE+ A+ IE L V         G+       R KYR+L +R    
Sbjct: 65  PEQRSARGVEYIARKIEVYAKPIEPLPV------DTMGKVPALLDTRIKYRWLLVRNPVE 118

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
               + R  ++N+ R       FIE  TP + A+  EG             ++  L Q+P
Sbjct: 119 KAIFIIRNSLLNAAREYFSKNGFIEVQTPKIVAAGAEGGATLFKIQYFENDAY--LSQSP 176

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMENVL 257
           Q +KQ+LMA GF R ++I P FR E   + R   E + +D+E  F+   +D+L T+EN++
Sbjct: 177 QLFKQMLMA-GFTRIYEITPYFRAEKYNTTRHLNESWGIDVEQGFINSVEDVLQTLENLI 235

Query: 258 RGVFEEFSNGNTVS 271
             + E     N   
Sbjct: 236 TYIIEYVLKNNKEE 249



 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 26/159 (16%)

Query: 411 SFAADARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
           S A D  ++  ++LG I+    +E  +I+ FP+            +   + M        
Sbjct: 284 SEAEDLSDYAEKKLGEIMTEKGYELYFIVGFPW-----------ASTGFYYMR------- 325

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              D   +   ++DL   G EIASGG R H  E +L+A    G++       FG    AF
Sbjct: 326 ---DEDGVYTRKFDLDYRGLEIASGGQREHRYEKLLKALREKGLNP----ENFGFYLEAF 378

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           + GMPPHGG   G++R++M +L  +NVRE  LF   +  
Sbjct: 379 KYGMPPHGGFGLGVERLLMRMLNLENVREAILFVRDRTR 417


>gi|281211769|gb|EFA85931.1| asparagine-tRNA ligase [Polysphondylium pallidum PN500]
          Length = 518

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 53/287 (18%), Positives = 101/287 (35%), Gaps = 32/287 (11%)

Query: 8   SCGDLGVSDVGSF-VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           +  ++  ++     ++  GWV   R    I F+++ D   +  +    D           
Sbjct: 68  TIKEIKSANEEKSSIKTRGWVKSFRAQKTIGFVELSDGSTVQGLQVIGDP---------- 117

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQK-IEILSVAEELPLPVFGEREYPESIR 125
           ++     +G  +  S     +   + Q+EL   +   ++  + E        + +     
Sbjct: 118 AQLTGITNGCCVEVSGSLTRSPGKSQQLELKLDQPARVIGASPEDYPLQ--PKHHSFEFL 175

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---V 182
            +   +  R +TL   I  R +  N +        F    TPI+TAS  EG  +     V
Sbjct: 176 REIAHIRPRSNTLGSMIRVRNQASNLINQYFQERQFQLVHTPIITASDCEGGGEQFQVTV 235

Query: 183 PSRVNQG------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           PS   Q              F+   A      Q +  + AS   R +   P FR E   +
Sbjct: 236 PSNQQQQQQQKQQQQQQSSHFFGEPAFLTVSGQLEAEIFASSHGRVYTFGPTFRAEKSNT 295

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
            R   EF+ ++ EM+F+  +D L+  E+ ++   +           F
Sbjct: 296 TRHLSEFWMVEPEMAFINLNDNLSIAEDFIKYTVKNILEKCPEELEF 342



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 72/219 (32%), Gaps = 31/219 (14%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ-DGDSCFFIAGDPLKFCSFAA 414
           +A  F +      +       +  N      +  RL+   + +       D +K  + + 
Sbjct: 320 IAEDFIKYTVKNILEKCPEELEFFNKRIDTKLFERLNCTLNNEFIRLPYTDAVKILNNSF 379

Query: 415 DARNHIAQELGIINCNCF------EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
            ++     +L   +             +++D+P                 +T       +
Sbjct: 380 SSKIKWGDDLQREDEKNLITHFNGVPVFVIDWP-----------KQIKPFYTRENDDQTT 428

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +   DL         LV    E+  G IR    E ++Q    + +     EN +      
Sbjct: 429 VSNMDL---------LVPEVGELIGGSIREERYEKLVQRIKELKMD----ENSYSWYLDL 475

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PHGG   G +R +  + G +N+R+V   P  QN
Sbjct: 476 RKYGSAPHGGFGLGFERFLQYVTGLQNIRDVIPIPRHQN 514


>gi|84497266|ref|ZP_00996088.1| lysyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84382154|gb|EAP98036.1| lysyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 509

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 68/340 (20%), Positives = 131/340 (38%), Gaps = 35/340 (10%)

Query: 5   RTHSCGDLGVS----DVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTHS  ++       + G      V ++G V  +R  G + F  +++  GI         
Sbjct: 51  RTHSLAEVRSQWGHLETGQETDDVVSVAGRVVFIRNTGKLAFATLQEGEGI---RLQIML 107

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +  E+ +   + W   +D G  +S +   I++    G++ + A    + S A      + 
Sbjct: 108 SLAEVGEDALAAWKSDVDLGDHVSVTGRVISSR--RGELSVMATSWTMASKALRPMPVL- 164

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASS 173
             +E  E  R + R+ DL      +++V+ + +I ++MR  +  + ++E  TPIL     
Sbjct: 165 -HKELSEESRVRQRYADLIVRQEARDMVRTKAKIYSAMRHELERQGYLEVETPILQLIHG 223

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F             L  A +   +  +  G DR +++   FR+E   +   P E
Sbjct: 224 GAAARPFKTHLNAFDQEM-TLRIALELNLKKAVVGGVDRVYEMGRIFRNEGVDATHSP-E 281

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEF--------SNGNTVSNNFLRICYDDAIR- 284
           F  L+   ++ +Q  I   +++V     +               +   +  +   DA+  
Sbjct: 282 FTMLEAYQAWGDQTTIAQLLKDVYLAAADAIGSRQIETDKGTIDLDGEWRWLPVYDAVSE 341

Query: 285 ------RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
                    TD   LR     H VT      + +VF ++L
Sbjct: 342 AVGETVNVDTDLETLRAHAAKHEVTIDPAWDKDKVFLELL 381



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 57/173 (32%), Gaps = 12/173 (6%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+     G+ +   +     R H A+    I+       W  D  F E   E  +     
Sbjct: 337 DAVSEAVGETVNVDTDLETLRAHAAKHEVTIDP-----AWDKDKVFLELLGELVEPGLLQ 391

Query: 457 NPFTMPQGGMESLKGNDLLS--IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             F      +         S       +DL+  G E  +G        +  +   +  + 
Sbjct: 392 PTFLCDYPAIAQPLARPHRSEPGLIEAWDLIIGGVERGTGFSELIDPVIQRKVLEDQSLK 451

Query: 515 ----KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                           RA + G PP GGI  G+DR+VML     N+RE  LFP
Sbjct: 452 AAGGDPEAMQLDEDFLRALEYGAPPMGGIGFGVDRLVMLFTDV-NIRETILFP 503


>gi|83314502|ref|XP_730387.1| asparaginyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23490096|gb|EAA21952.1| asparaginyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 586

 Score =  151 bits (381), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 62/402 (15%), Positives = 120/402 (29%), Gaps = 66/402 (16%)

Query: 17  VGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLC 72
           +   V + GW   VR  GG    F+++ D      +    N +   ++            
Sbjct: 82  IDQLVVVCGWSKAVRKQGGGRFCFVNLNDGSCHLNLQIVVNQNIDNYDKLLKCGIGCCFR 141

Query: 73  IDGLVMSRSAETINAN-IITGQIEL-----SAQKIEILSVAEELPLPVFGEREYPESIRF 126
             G ++    +      ++   +EL     S    EI     +       ++ + +    
Sbjct: 142 FTGTLILSPVQNTEKKGLLNQNVELTLTDNSIHSFEIYGENLDPQKYPLSKKNHGKEFLR 201

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           +   L  R   +   +  R  ++ S      +  FI   TP++T S  EG  +    + +
Sbjct: 202 EVAHLRPRSYFISSVMRIRNALMLSTHLFFQSRGFICIQTPLITTSDCEGGGEMFTVTTL 261

Query: 187 N--QGSFYALPQA-------------------------------PQQYKQLLMASGFDRY 213
              +G   ++P+                                  Q     + S     
Sbjct: 262 FNEEGDINSIPKTKKKINNNQIVKREDQNTNELETNNNTNQYIISGQLSLENLCSSMGDV 321

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS-- 271
           +   P FR E+  + R   EF+ ++ EM+F +  D +   E  ++       N N     
Sbjct: 322 YTFGPTFRAENSHTSRHLAEFWMIEPEMAFADIYDNMEVAEAYIKYCIRYVLNNNFHDIY 381

Query: 272 -------------------NNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSE 310
                              +NF +I Y +AI        +   PI   M   +EH     
Sbjct: 382 YFEENVEKGLIDRLKNILNDNFAKITYTNAIDLLTKYSNNFEVPIKWGMDLQSEHERFIS 441

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
            ++F K + V    +           +      M+      G
Sbjct: 442 EQIFKKPVIVYNYPKDLKAFYMKLNDDNKTVAAMDVLVPKIG 483



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 4/96 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +K ND     A    LV    E+  G  R    E++ +  +   ++       +    + 
Sbjct: 463 MKLNDDNKTVAAMDVLVPKIGEVIGGSQREDNLELLDKMINEKKLNI----ESYWWYRQL 518

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            + G  PH G   G +R++ML+ G  N+++   FP 
Sbjct: 519 RKYGTHPHSGFGLGFERLIMLVTGVDNIKDTIPFPR 554


>gi|154499973|ref|ZP_02038011.1| hypothetical protein BACCAP_03630 [Bacteroides capillosus ATCC
           29799]
 gi|150271571|gb|EDM98828.1| hypothetical protein BACCAP_03630 [Bacteroides capillosus ATCC
           29799]
          Length = 440

 Score =  150 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 71/312 (22%), Positives = 114/312 (36%), Gaps = 29/312 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           +G +     V + G VH +R  GG+ FL +R   G+ Q V  P+     + +       +
Sbjct: 19  IGGALANQAVSVRGMVHALRDMGGLTFLLLRKGDGVLQCVCPPEVELDGVTEE----CAV 74

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGEREYPESIRFKYR 129
            + G V              G  EL+A  + +LS   A         +       R   R
Sbjct: 75  EVLGTVHPEER-------APGGAELAAAAVRVLSRPAAPAPVPLSKWKLNLTLDSRLSLR 127

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
              LR          +  I  + R  + +++F E  TP +  +  EG  +        + 
Sbjct: 128 PAVLRSLRERSVFRIQAGICRAFREYLQSQDFTEIHTPKIVHAGAEGGSNIFRLDYFGRK 187

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDD 248
           +F  L Q+PQ YKQ  M   F+R F++ P FR E   + R   E+  +D EM +++   D
Sbjct: 188 AF--LTQSPQFYKQ-TMVPVFERVFEVGPVFRAEKHSTTRHLNEYTSMDFEMGYIDSFYD 244

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA--IRRYGTDKPD----------LRNP 296
           I+      LR  F             L I   +   I     D+            +RNP
Sbjct: 245 IIAMETGFLRYCFRLLGEEYAGDLARLDITLPEMKDIPCVRFDEAKRLAAEKYGYAIRNP 304

Query: 297 IIMHNVTEHFVH 308
             +    EH + 
Sbjct: 305 YDLEPEEEHAIG 316



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                  PF             D     +  +DL+  G E+ +GG R H     +     
Sbjct: 332 HYPAKKRPFYAMDD------PEDPKYTLS--FDLLFRGMEVTTGGQRIHDYYQQVAKMER 383

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +G+        F       + G PPHGG+  G++R+ M L G  NVR  +LFP  +   +
Sbjct: 384 LGMDPAE----FESYLMLHKYGAPPHGGLGIGLERLTMQLCGLDNVRLATLFPRDRTRLE 439

Query: 571 L 571
            
Sbjct: 440 P 440


>gi|146420576|ref|XP_001486243.1| hypothetical protein PGUG_01914 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 432

 Score =  150 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 64/316 (20%), Positives = 120/316 (37%), Gaps = 23/316 (7%)

Query: 36  IIFLDIRDHYGITQVVANPD-----SACFEIAKSVRSEWVLCIDGLVMSRSAETINANII 90
           + FL +R    + Q +   D         + A S+  E ++ + G V        +A + 
Sbjct: 1   MAFLTLRQQSELIQCLIKADGEQVLKQMVKFAGSINLESIVVVHGEVRKVEEPIKSATV- 59

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGERE-------------YPESIRFKYRFLDLRRDT 137
               E+   KI ++S A E    +  +                    R   R +DLR  T
Sbjct: 60  -QDAEIHVSKIYVISAAPEQLPILIEDASRSDAEAEAAGLPVVNLDTRLDARVIDLRTTT 118

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
                  +  +    R  +  + F+E  TP L  ++ EG  +    +     ++ A  Q+
Sbjct: 119 NQAIFKIQAGVGKLFREFLDKKGFVEIHTPKLLGAATEGGANVFEVTYFKSLAYLA--QS 176

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENV 256
           PQ YKQ L+A+ F++ +++AP FR E+  + R   EF  +D+EM+F E   ++L+ + ++
Sbjct: 177 PQFYKQQLIAADFEKVYEVAPVFRAENSNTHRHMTEFMGMDLEMTFEEHYHEVLDNLADL 236

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
              +F E  +        +R  Y     +   D   +R               +   F  
Sbjct: 237 FVYIFSELKSRYAKEIATVRRQYPMEEFKLPKDGKMVRIEFKEGVAMLREAGKDVGDFDD 296

Query: 317 ILSVNPGYEVWAIPAK 332
           + + N       +  K
Sbjct: 297 LSTENEKLLGKLVREK 312



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 44/115 (38%), Gaps = 11/115 (9%)

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
                +TMP                +  YD    G EI SG  R H  E++ +   ++ I
Sbjct: 326 AIRPAYTMPDPEDPRY---------SNSYDFFMRGEEIMSGAQRIHDPELLKKRMIDLDI 376

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
                         AF  G PPH G   G++R++M  L  KN+R  SLFP     
Sbjct: 377 DPNA--PGLSDYIDAFTYGCPPHAGGGIGLERVLMFYLDLKNIRRASLFPRDPKR 429


>gi|184201797|ref|YP_001856004.1| lysyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183582027|dbj|BAG30498.1| putative lysyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 1099

 Score =  150 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 101/260 (38%), Gaps = 10/260 (3%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
             +   + V   V L G V  +R  GG++F  I +H    QV+    +   E+    R  
Sbjct: 645 IEEGAEATVAEPVSLGGRVRELRDFGGVVFAVIEEHDVRLQVILEDSAVSPELLSLWRRA 704

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
                 G  +S +     +    G+  L A    + S +   P+P           R + 
Sbjct: 705 ---VDVGDHISATGTLGRSR--RGEPSLLATSWAMASKSLR-PVPSDHTGFTNPEARVRQ 758

Query: 129 RFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV 186
           R+LDL  +     +++ R+R I +MR   +   ++E  TP+L A      AR F      
Sbjct: 759 RYLDLIVNKDSARLLRARSRGIAAMRQSFMERGYMEVETPMLQAVHGGASARPFRTHINA 818

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                Y L  AP+ Y + L   G D+ F++   FR+E   +   P EF  ++   +  + 
Sbjct: 819 YNADLY-LRIAPELYLKHLCVGGMDKIFELNRNFRNEGADATHNP-EFTSVEAYAAHGDY 876

Query: 247 DDILNTMENVLRGVFEEFSN 266
           + +     +++  V      
Sbjct: 877 NTMRVLTRDLIIEVATAIHG 896



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 60/197 (30%), Gaps = 28/197 (14%)

Query: 374  PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
            PV + ++      +     +++  +              A +    +  EL  +      
Sbjct: 922  PVHQAVSEATGTLLTSHTPLEEVRAVASAHSVHWSEEMTAGEVVLELYDEL--VEGQTTL 979

Query: 434  FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
              +  DFP      E   +   H                D     + ++DLV  G EI +
Sbjct: 980  PVFYTDFPL-----ETSPLTRTHR--------------TDPK--LSERWDLVAFGAEIGT 1018

Query: 494  GGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
                           +                      A +  MPP GG+  G+DR++M+
Sbjct: 1019 AYSELVDPVDQRNRLTEQSYKAAAGDPEAMEVDENFLTALEYAMPPTGGLGIGVDRMIMM 1078

Query: 550  LLGAKNVREVSLFPMSQ 566
            L G  N+R    FP ++
Sbjct: 1079 LTGT-NIRATLAFPFTR 1094


>gi|47208664|emb|CAF88671.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 460

 Score =  150 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 64/347 (18%), Positives = 121/347 (34%), Gaps = 41/347 (11%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++F+ +RD  G  Q V + ++              + + G 
Sbjct: 42  GQRVKVFGWVHRLRRQGKNLMFIVLRDGTGFLQCVLSDNTE-----------STVALYGT 90

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V              G  EL     E++ +A           +    ++   R + +R +
Sbjct: 91  VTPVPEG----KQAPGGHELHCDFWELIGLAPAGGADNLLNEDSDVDVQLNNRHMLIRGE 146

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-------FLVPSRVNQG 189
            + K +  R+ +    R    +  + E   P    SS  GA             +   + 
Sbjct: 147 NVSKILRVRSTVTQCFRDHFFSRGYYEVR-PTEHRSSDAGADPGGGCGSTLFSLNYFGEQ 205

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           ++  L Q+ Q Y +  +       F IA  +R E  R+ R   E+  ++ E  F+  DD+
Sbjct: 206 AY--LTQSSQLYLETCIP-ALGDTFCIAQSYRAEQSRTRRHLSEYSHVEAECPFISFDDL 262

Query: 250 LNTMENVLRGVFEEFSN-------------GNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           LN +E+++  V +                        F R+ Y +AI          ++ 
Sbjct: 263 LNRLEDLVCDVVDRVLKSPAGELLHDINPTFKPPKRPFRRMNYTEAIEWLREHGIK-KDD 321

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
              +   E    +  RV +  ++       +    K     R   D+
Sbjct: 322 GTFYEFGEDIPEAPERVMTDTINEPILLCRFPAEIKSFYMQRCSEDK 368



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R   SE +L+ +  
Sbjct: 351 RFPAEIKSFYMQRCSEDKRLTESVDV-------LMPNVGEIVGGSMRIWDSEELLEGYRR 403

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI        +       + G  PHGG   G++R +  LL   ++R+V L+P 
Sbjct: 404 EGIDPTP----YYWYTDQRKYGTCPHGGYGLGLERFLTWLLNRHHIRDVCLYPR 453


>gi|291320251|ref|YP_003515512.1| asparaginyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752583|emb|CBH40555.1| Asparaginyl tRNA synthetase [Mycoplasma agalactiae]
          Length = 452

 Score =  150 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 104/266 (39%), Gaps = 16/266 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDG 75
            + V L GWV   R +  I FL I D   +   Q     D   F++   VR    + + G
Sbjct: 18  DTDVVLRGWVVSNRGNNKIRFLTISDGSTVESIQATLKGDEFDFKLLDEVRIGAAVQVYG 77

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++               +E+ A K  +L   +        ++E       +   L  R 
Sbjct: 78  KIVLTPK-------AKQPLEILASKFVLLKNVDHDFPIQ--KQEINLETLREIPHLRHRT 128

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-----GS 190
           + L   ++ R+ +   +        F+  S PI+T++  EGA +    +  N+     G+
Sbjct: 129 NLLRCVMLIRSTLALEIHKFFAENGFLNFSAPIITSNDGEGAGEQFYVNDGNKKQPFFGN 188

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
             A      Q      A GF++ +  AP FR E   + +   EF+ ++ E++F +   ++
Sbjct: 189 NNATLGVTGQLHAESYAIGFEKVYTFAPTFRAEHSNTKKHAAEFWMIEPEVAFYDLKKVI 248

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLR 276
           N    +L+ V +   N +     +L+
Sbjct: 249 NLAAKLLKSVIKNTINKHLREFEYLQ 274



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 75/210 (35%), Gaps = 37/210 (17%)

Query: 358 YIFWRLDESGNVAGMGPVAKHLNI-VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADA 416
           Y+   +D S        + K L I    +A+     ++D     F   D      FA + 
Sbjct: 272 YLQNNVDSSLLERLNSFIKKKLMILDYKDALVELEKVKD----KFENKDIKFGLDFATEH 327

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             ++A+E+            I++FP             +   F M Q             
Sbjct: 328 EKYLAEEI------AHGPVAIINFP------------KSFKAFYMHQNSDNQTVA----- 364

Query: 477 IKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
                +DL+  G  E+  G  R    E +L+    VGISKE ++          + G   
Sbjct: 365 ----AFDLLVPGIGELIGGSQREARYEKLLERALEVGISKEELQ----WYLDLRRFGHSG 416

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             G   G +R+VM + G  N+R+V  +P +
Sbjct: 417 SAGFGIGFERLVMYITGVDNIRDVIPYPRT 446


>gi|91081349|ref|XP_970908.1| PREDICTED: similar to aspartyl-tRNA synthetase [Tribolium
           castaneum]
          Length = 456

 Score =  150 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 65/359 (18%), Positives = 122/359 (33%), Gaps = 60/359 (16%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L  S VG  + + GW+  +R     +F D+ D     ++            + + +   +
Sbjct: 17  LDKSGVGDVITVKGWIKSLRDQKEHVFFDVSDGSTAKKLQILLPKKS--KPEDLSTGASV 74

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130
            + G +              GQ+EL+A  IE+          P    ++Y      +Y  
Sbjct: 75  VVSGPLTLSPK---------GQLELTANSIEVCGKCVVSEGYPFAPRKQYAAEYIRQYLH 125

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP------- 183
              R       +  R     ++     +E F+   TP+LT++  EGA +           
Sbjct: 126 FRPRTHKFGALLRLRNAATLAIYNHFNSEGFVNVHTPVLTSNDCEGAGEVFKVVPDNKKL 185

Query: 184 -------------SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                           NQ SF        Q     +A G  + +   P FR E+ +S   
Sbjct: 186 IKSMAKESQAEDEVYFNQKSFL---TVSGQLHLEAVAHGLSKVYTFGPTFRAENSKSRLH 242

Query: 231 PGEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEFSN---------------GNTVSNNF 274
             EFY L+ E++FVE+ D ++  +E +++ V ++  N                + +  +F
Sbjct: 243 LSEFYMLEGEIAFVEKLDGLMTCIEQLIKQVTKKLVNDSIEDIEKCQEKKVSFDWLDKSF 302

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHN---------VTEHFVHSEFRVFSKILSVNPGY 324
             + Y +A+     +K          +         + E+F      V      + P Y
Sbjct: 303 PVVTYKEAVTILSQNKDKFSENFDSKDGFGKEHEMFLVEYFGKVPTFVIDWPKDMKPFY 361



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 28/150 (18%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E+ ++        +++D+P     ++ K       PF M   G  ++   DLL      
Sbjct: 335 HEMFLVEYFGKVPTFVIDWP-----KDMK-------PFYMKDNGDGTVAALDLLG----- 377

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
                N  E+  G +R +  E +L+   N                   + G  P GG   
Sbjct: 378 ----PNVGEVVGGSLRENNYEKLLEKIPNSN-------GHLDWYLDLRKFGSVPTGGFGL 426

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R + L+LG  N+++   FP   + C L
Sbjct: 427 GFERYLQLILGISNIKDTIPFPRWPHNCSL 456


>gi|296392865|ref|YP_003657749.1| lysyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296180012|gb|ADG96918.1| lysyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 503

 Score =  150 bits (380), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 92/238 (38%), Gaps = 10/238 (4%)

Query: 31  RPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANII 90
           R  G ++F  ++   G         +   E   ++    V    G ++    E +++   
Sbjct: 73  RDAGKLLFATLQAGDGARLQAMVSLAGVGEEPLALWKSDVDL--GDIVFVRGEVVSSK-- 128

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRII 149
            G++ + A   +    A+ L       +E  E  + + R+LDL  R         R  ++
Sbjct: 129 RGELSVLADSWQF--AAKALRPLPVAHKELSEEAQVRQRYLDLIMRPEARSVARTRVAVL 186

Query: 150 NSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
             MRC +    F+E  TPIL        AR F+  S      FY L  AP+ + +  +  
Sbjct: 187 REMRCALERRGFLEVETPILQTIQGGASARPFIAHSNALDIDFY-LRIAPELFLKRCLVG 245

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           G DR F+I   FR+E   +   P EF  L+   ++   D +      +++ V      
Sbjct: 246 GLDRVFEINRNFRNEGIDATHSP-EFTMLEAYEAYGTYDTVAALTRELVQEVAHAVFG 302



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 56/157 (35%), Gaps = 28/157 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
                 + + L  +  +     ++  FP               +P T     ++      
Sbjct: 366 GKLVEELWEHL--VGDHLRAPTFVRHFP------------AETSPLTRQHRSID------ 405

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAF 529
                  ++DL   GFE+A+G        V  + F    + +   +            A 
Sbjct: 406 ---GVVEKWDLYVRGFELATGYSELVDPVVQRERFQAQALLRSSGDGEAMPLDEDFLAAM 462

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + GMPP GG+  G+DR++    G   +R+  LFP+++
Sbjct: 463 EHGMPPAGGLGLGVDRLMTAFTGLG-IRDTVLFPITR 498


>gi|326793288|ref|YP_004311109.1| aspartyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326544052|gb|ADZ85911.1| aspartyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 438

 Score =  150 bits (379), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 103/258 (39%), Gaps = 14/258 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             +    V +   VH++R      F+ +R    I Q +   D  C    + ++    + +
Sbjct: 19  KKNPDELVIIEACVHKIRTMSEFAFVILRTGRYIVQAIYEKD-RCKASIEQLKVGAYVRV 77

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--ESIRFKYRFL 131
            G +       +         EL  + +EILS+         G ++           R +
Sbjct: 78  KGHIREDERANL-------GFELQLEDLEILSMPAADYPLNVGHKKLGCGLEANLDNRSV 130

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR          +  +++  R  M ++ F +  TP + A+  EG  +       NQ +F
Sbjct: 131 ALRNPYERAIFKVQEGVVSGFREFMESQGFTQVHTPKIVAAGAEGGANIFKLDYFNQDAF 190

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDIL 250
            A  Q+PQ YKQ  +A  FDR F+IAP +R E   + R   E+  LD EM +++   D++
Sbjct: 191 LA--QSPQFYKQTCVA-FFDRVFEIAPVYRAEKHNTSRHLNEYIGLDFEMGYIDSMYDVM 247

Query: 251 NTMENVLRGVFEEFSNGN 268
                +++ V     +  
Sbjct: 248 EMETAMIKYVMNYLESHC 265



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF +I  FP             +  PF       +S          A  +DL+  G EI 
Sbjct: 324 EFLFITHFP------------ASKRPFYAMNDKEDSRF--------ALSFDLLFRGLEIT 363

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H  +  +     +GI                + GMPPHGG+  G++R VM LL 
Sbjct: 364 TGGQRIHDYQQQVDKMKEMGIDP----EELSHYLSIHKYGMPPHGGLGIGLERFVMKLLD 419

Query: 553 AKNVREVSLFPMSQNFCDL 571
            +NVR+ S+FP   +  + 
Sbjct: 420 LQNVRQASMFPRDVHRLEP 438


>gi|213389871|gb|ACJ45998.1| putative asparaginyl tRNA synthetase [Palm lethal yellowing
           phytoplasma]
          Length = 471

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 53/285 (18%), Positives = 100/285 (35%), Gaps = 20/285 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +    + ++GW+   R    I F+D+ D   I  +     +         + +  L I
Sbjct: 17  LQNTKKTICVNGWIKNCRFQKEIFFIDLNDGSFIEDLQVVYKNNSKNNIDLKKIKENLQI 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
              V        N  I +   EL + KI  L     +       + + +    +   L L
Sbjct: 77  GAAVCVEGILVPNFKIKS-NFELLSSKIIFLEK--NVNDYPIQPKNHSKIFLRQIAHLRL 133

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN------ 187
           R          R  +   +      E F+   TPI+T S  EGA +    + ++      
Sbjct: 134 RTKLFGAVFRIRNSVSFFIHEFFQKEGFLYAHTPIITTSDGEGAGELFKVTSLDLAKINL 193

Query: 188 --------QGSFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                   +  F+A P       Q +    A  F + +   P FR E+  + R   EF+ 
Sbjct: 194 NEEKKIDYKKDFFAQPTFLTVTGQLEGEAFAMAFSKIYTFGPTFRAENSNTPRHISEFWM 253

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
           ++ EM+F +    +   +N+++ V +     N     FL    ++
Sbjct: 254 IEPEMAFCDLQQNIIVAQNLIQYVIKCCLKNNKKDLEFLENTQEN 298


>gi|328768004|gb|EGF78052.1| hypothetical protein BATDEDRAFT_91161 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 503

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 122/386 (31%), Gaps = 72/386 (18%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             + +G  V + GWV   R    + F+D+ D   ++ +    DS+   +AK++       
Sbjct: 29  DSTYIGKTVTVHGWVRSQRLQKTVTFIDLDDGSLLSGLQIVMDSS---VAKTL------- 78

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +  S + + +      ++L A  + +L   +     +   R   E +R +Y+ L 
Sbjct: 79  TTGTSVKISGKLVPSPSKNQAVDLEAIDLTVLGECDPQSYAISKNRLPLEHLR-EYQHLR 137

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----- 187
            R          R+  +  +     A+ F + + PILT    EG  +       +     
Sbjct: 138 SRTRIFGALWRIRSAALQGIHDFFKAQEFTQVNMPILTTHDCEGGGEAFRVLTDDTLKSY 197

Query: 188 ------------------QGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
                                F+  P       Q     MAS   R + + P FR E  +
Sbjct: 198 QNYAVNYSQTTQHQALPLPDEFFGKPVYTTVSAQLHLEFMASALSRVYVLGPAFRAEKSQ 257

Query: 227 SDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVS-------------- 271
           S R   EF+ L+ E  F+     + + +E  ++ V +   N                   
Sbjct: 258 STRHLAEFWMLEAEACFIPTISALTDLIEGNIKHVIQHVLNTCQEDLALFDQFSERDLVQ 317

Query: 272 -------NNFLRICYDDAIRRY---------GTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
                    F R+ Y DA++               P+ + P+         + SE   F 
Sbjct: 318 KLDNVSNKLFERMTYTDAVQVLLNAEKGINGKRCAPEWQFPVKWG----LPLQSEHEKFL 373

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFC 341
               +     V   P K         
Sbjct: 374 AETIIKGPVFVTDYPKKIKPFYMKQS 399



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 17/133 (12%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             ++ D+P        KKI     PF M Q G+ +              DL+     E+A
Sbjct: 381 PVFVTDYP--------KKIK----PFYMKQSGIGNTSVTKCDGETVACTDLLLPKVGELA 428

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G +R    E++ Q  ++ G+       +        + G  PHGG   G +R++  L G
Sbjct: 429 GGSLREDQYELLAQKINDAGLD----SAQLEWYLDLRKYGSVPHGGYGMGFERLLGYLTG 484

Query: 553 AKNVREVSLFPMS 565
             N+R++   P S
Sbjct: 485 MTNIRDMIPAPRS 497


>gi|156387361|ref|XP_001634172.1| predicted protein [Nematostella vectensis]
 gi|156221252|gb|EDO42109.1| predicted protein [Nematostella vectensis]
          Length = 564

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 90/223 (40%), Gaps = 8/223 (3%)

Query: 19  SFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
             V++ GWVHR+R  G  ++F+ +RD  G  Q V          A  + +E  +C+ G+V
Sbjct: 144 QRVKIFGWVHRLRRQGKNLMFVVLRDGTGFLQCVLTDILCHTYEALVLSTEATVCLYGVV 203

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +            G  E++    E++  +    +      E     +   R + LR +T
Sbjct: 204 KAVPEG----KSAPGGHEMAVDYWELVGESPAGGVDNLVNEESAIDTQLDNRHIMLRGET 259

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           L K +  R+ + +  R       ++E + P +  +  EG       +   + +F  L Q+
Sbjct: 260 LAKILRMRSVVTHCFREHYFDRGYVELTPPCMVQTQVEGGSTLFKFNYFGEDAF--LTQS 317

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            Q Y +  +       F IA  +R E  R+ R   E + L + 
Sbjct: 318 SQLYLETAIP-ALGDVFCIAESYRAEQSRTRRHLAETFDLLIY 359



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 13/115 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
           +       F M +   +      +        DL+  G  EI  G +R    + +++ + 
Sbjct: 455 RFPVEIKSFYMQKCDDDRRLTESV--------DLLMPGVGEIIGGSMRMWKYDELIEGYK 506

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             GI        +       + G  PHGG   G++R +  LL  +++R+V  +P 
Sbjct: 507 REGIDPAP----YFWYTDQRKYGSCPHGGYGLGLERFLTWLLNRQHIRDVCFYPR 557


>gi|296811126|ref|XP_002845901.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238843289|gb|EEQ32951.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 946

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 26/275 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVAN-----PDSACFEIAKSV 65
           +     G  +     +H VR  G    FL  R      Q V         +     A+ +
Sbjct: 131 ITDEMQGMELVFRARLHVVRRMGAKFAFLVFRQQLHTLQGVLQTAPNLRSANMIYWAERI 190

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-------- 117
               +L + G +           I + + E+  +++ ++   EE       E        
Sbjct: 191 PVGSILRVKGHLKKPDVPVFGTTIHSLEFEI--EELHVIVRREEPIPFSVYEAELAGAHE 248

Query: 118 -------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                  ++ P+  R   R LDLR DT       ++ I N  R  +   NFIE  TP L 
Sbjct: 249 ERLEGIRQKIPDRTRLSNRILDLRTDTSQSIFRIQSAISNMFRSCLDTHNFIEIHTPKLQ 308

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           AS+ E        +  ++ +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R 
Sbjct: 309 ASATESGASVFGVNYFSRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRH 366

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF 264
             E+  LD+EM+  E   + L  +++VL+ +F+  
Sbjct: 367 LTEYTGLDIEMAIEEHYHEALEVLDHVLKSIFKSI 401



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 59/155 (38%), Gaps = 26/155 (16%)

Query: 415 DARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
             R+ I   LG ++        +I+D           +   +  PF       +      
Sbjct: 459 GTRDEI--RLGELVKAKYHTDYYILD-----------RFPASARPFYAMPHPDDDRF--- 502

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                   +D+   G EI SGG R H  E++ +    VGI    +E         F+ G 
Sbjct: 503 -----TLSFDIFVRGQEIVSGGQRIHNPELLEKRMREVGIDPSSMEE----YMEGFKWGA 553

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PPH G   G++R++ML+L   N+R  SLF      
Sbjct: 554 PPHAGAGIGLERLLMLILKLGNIRLGSLFHRDPKS 588


>gi|284033104|ref|YP_003383035.1| tRNA synthetase class II (D K and N) [Kribbella flavida DSM 17836]
 gi|283812397|gb|ADB34236.1| tRNA synthetase class II (D K and N) [Kribbella flavida DSM 17836]
          Length = 429

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 98/254 (38%), Gaps = 14/254 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            S VG  V ++GWVHR R    + FL +RD  G++Q+V        ++   +  E V+ +
Sbjct: 9   PSAVGQTVTVAGWVHRRRRLAAVSFLVLRDRSGLSQIVVKAPETQAQL-DGLGEETVVQV 67

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSV--AEELPLPVFGEREYPESIRFKYRFL 131
            G V +            G  EL    I  L+                    +      +
Sbjct: 68  TGTVAANPQ-------APGGAELVDPVIVPLTEPAKTPPIELWRPTVGAGLPVVLDNAPV 120

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR   +          ++  R  +   +F E  TP +  ++ E   +          ++
Sbjct: 121 ALRHPAVRAGWEVAAAALHGFRSTLDGLDFTEIQTPKIVGTATESGANVFALDYFGGPAY 180

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDIL 250
            A  Q+PQ YKQ  M   F+R +++ P FR E   + R   E+  LD E  F+ +  D+L
Sbjct: 181 LA--QSPQFYKQ-TMVGVFERVYEVGPVFRAEPHDTVRHLAEYVSLDAEFGFIGDHRDVL 237

Query: 251 NTMENVLRGVFEEF 264
             +  VL G+    
Sbjct: 238 AVLREVLAGMLATV 251



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 10/115 (8%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                  PF          + +D     +  +DL+  G E+ +GG R H       A + 
Sbjct: 319 GYPMVKRPFYTHP------QPSDPR--WSNSFDLLFRGVELVTGGQRLHRYS--DYAAAL 368

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
               +      +    +AFQ GMPPHGG A G++R V  L GA+NVREV+LFP  
Sbjct: 369 AARGESADAPAYSSYLQAFQHGMPPHGGFAIGLERFVARLTGAENVREVTLFPRD 423


>gi|171694880|ref|XP_001912364.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947682|emb|CAP59844.1| unnamed protein product [Podospora anserina S mat+]
          Length = 559

 Score =  150 bits (379), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 66/340 (19%), Positives = 126/340 (37%), Gaps = 30/340 (8%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI-AKSVRSEWVLCIDGL 76
             V L G V  VR  G  ++F+D+R  +   Q + N            +++   L   G 
Sbjct: 85  EEVTLRGRVESVRRAGSKLVFIDVRSEFENVQGLCNLGKLVDGTTGSGLKNLARLLNRGD 144

Query: 77  VMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLD-LR 134
           ++S + +       TG++ + A ++ E+L+ +         +          +R +D L 
Sbjct: 145 IISVTGKA--TRTKTGELSIQATQLPEVLTPSLVPRPEKVEDTL--------HRHIDMLA 194

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
                  +  R+ I   +R      NF+E  TPIL+ ++                    L
Sbjct: 195 NRRTVDTLRLRSYITRYLRDFFHERNFLEFQTPILSGNAGGAVARPFTMHAEAVSKDVTL 254

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ + + L+  G DR F++ P FR+E       P EF   +   ++    D++   +
Sbjct: 255 RIAPELWLKRLVVGGVDRVFELGPAFRNEGIDQTHNP-EFTICEFYHAYANLQDLITITQ 313

Query: 255 NVLRGVFEEFSN--GNTVSNNFLRICYDDAIRRYGTDKPDL------RNPIIMHNVTEHF 306
           +++RGV E  +    N   ++   I  D +I +    + +       +      ++T   
Sbjct: 314 DLIRGVAEHCAKLISNGTLSSLPEIS-DLSIYQQPFQQAEFIPTLQDKLGFTFPDLTTPS 372

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
            HS+        SV P       P           D++ E
Sbjct: 373 AHSDLLSLLNSNSVPPFEGQDHFPLP------KLLDKLAE 406



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 5/123 (4%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E       +   H+P  M     +S          + + +L   G E+A+     +    
Sbjct: 410 EPLSLTTPLFITHHPVVMS-PLSKSFLCPKTNQHVSARTELFVKGKELANMYEEENDPFA 468

Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQC----GMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             + F+     K+V E +   +  +F      G+PP GG   G++R+VML+ G   + EV
Sbjct: 469 QREKFAEQIRQKDVEEGQKVEVDESFCYALASGLPPTGGWGCGVERLVMLMAGTGRISEV 528

Query: 560 SLF 562
             F
Sbjct: 529 LSF 531


>gi|322712058|gb|EFZ03631.1| lysyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 616

 Score =  150 bits (379), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 10/257 (3%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           D         V LSG V   R  G  +IFLDI + +   Q++ N +    E    ++   
Sbjct: 114 DFDEQAPSEEVTLSGRVRSKRVVGKSLIFLDIVNEFQKVQIMINKNKCVSEKHGRIQKFS 173

Query: 70  VLCIDGLV-MSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFK 127
           +      V    S          G+  L A ++ E+LS +    +    E+      R  
Sbjct: 174 LFKNLIQVGDHISVIGNATRTKAGEPTLQAIQLPELLSPS----MEQIPEKLTDPKARMA 229

Query: 128 YRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSR 185
            R +D L    +   +  R  I   MR    ++ F+E  TPIL  ++    AR F+  + 
Sbjct: 230 DRHVDMLVNREVVDVLRLRAEITKFMRDHFHSKRFLEFQTPILAENAGGAVARPFVTQAT 289

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +    AL  AP+ + + L+  G D+ F+I P FR+E   +   P EF   +   ++  
Sbjct: 290 EFRKKDLALRIAPELWLKRLVVGGVDKVFEIGPAFRNEGVDATHNP-EFTMCEFYSAYTN 348

Query: 246 QDDILNTMENVLRGVFE 262
             D++   E +L G+ +
Sbjct: 349 LADLIKETEELLFGLAK 365


>gi|270005193|gb|EFA01641.1| hypothetical protein TcasGA2_TC007211 [Tribolium castaneum]
          Length = 470

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 65/359 (18%), Positives = 122/359 (33%), Gaps = 60/359 (16%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L  S VG  + + GW+  +R     +F D+ D     ++            + + +   +
Sbjct: 31  LDKSGVGDVITVKGWIKSLRDQKEHVFFDVSDGSTAKKLQILLPKKS--KPEDLSTGASV 88

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130
            + G +              GQ+EL+A  IE+          P    ++Y      +Y  
Sbjct: 89  VVSGPLTLSPK---------GQLELTANSIEVCGKCVVSEGYPFAPRKQYAAEYIRQYLH 139

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP------- 183
              R       +  R     ++     +E F+   TP+LT++  EGA +           
Sbjct: 140 FRPRTHKFGALLRLRNAATLAIYNHFNSEGFVNVHTPVLTSNDCEGAGEVFKVVPDNKKL 199

Query: 184 -------------SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                           NQ SF        Q     +A G  + +   P FR E+ +S   
Sbjct: 200 IKSMAKESQAEDEVYFNQKSFL---TVSGQLHLEAVAHGLSKVYTFGPTFRAENSKSRLH 256

Query: 231 PGEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEFSN---------------GNTVSNNF 274
             EFY L+ E++FVE+ D ++  +E +++ V ++  N                + +  +F
Sbjct: 257 LSEFYMLEGEIAFVEKLDGLMTCIEQLIKQVTKKLVNDSIEDIEKCQEKKVSFDWLDKSF 316

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHN---------VTEHFVHSEFRVFSKILSVNPGY 324
             + Y +A+     +K          +         + E+F      V      + P Y
Sbjct: 317 PVVTYKEAVTILSQNKDKFSENFDSKDGFGKEHEMFLVEYFGKVPTFVIDWPKDMKPFY 375



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 28/150 (18%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E+ ++        +++D+P     ++ K       PF M   G  ++   DLL      
Sbjct: 349 HEMFLVEYFGKVPTFVIDWP-----KDMK-------PFYMKDNGDGTVAALDLLG----- 391

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
                N  E+  G +R +  E +L+   N                   + G  P GG   
Sbjct: 392 ----PNVGEVVGGSLRENNYEKLLEKIPNSN-------GHLDWYLDLRKFGSVPTGGFGL 440

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R + L+LG  N+++   FP   + C L
Sbjct: 441 GFERYLQLILGISNIKDTIPFPRWPHNCSL 470


>gi|269302722|gb|ACZ32822.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 527

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 65/354 (18%), Positives = 128/354 (36%), Gaps = 56/354 (15%)

Query: 8   SCGDLGVSDVGSF--------------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           SC D+  +  G                VR +G +   R  G   F  I DH    QV+ N
Sbjct: 40  SCEDIKKAFTGQELGNSEAAMSRSTPKVRFAGRLVLFRAMGKNAFGQILDHNQTIQVMFN 99

Query: 54  PDSACFE-------------IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQK 100
            +                  I K +    +L IDG +             +G++ +  + 
Sbjct: 100 SEFTSVHGLSKDAGVVPIKFIEKKLDLGDILGIDGYLFFT---------HSGELTVLVET 150

Query: 101 IEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAE 159
           + +L  +  L LP        + +R++ R+LDL     +    VKR+ II  +R  M A 
Sbjct: 151 VTLLCKSL-LSLPDKHAGLSDKEVRYRKRWLDLISSREVSDTFVKRSYIIKLIRNYMDAH 209

Query: 160 NFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
            F+E  TPIL        A+ F           + L  + +   + ++  G  R +++  
Sbjct: 210 GFLEVETPILQNIYGGAEAKPFTTKMEALHSEMF-LRISLEIALKKILVGGAPRIYELGK 268

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------- 268
            FR+E       P EF  ++   ++++  +++  +EN++  +    ++ N          
Sbjct: 269 VFRNEGIDRTHNP-EFTMIEAYAAYMDYQEVMVFVENLVEHLVRAVNHDNTSLVYSHWKH 327

Query: 269 -----TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
                     ++R+   ++I  Y     D+ +   +  + +         F+  
Sbjct: 328 GPQEVDFKAPWIRMTMKESIATYAGIDVDVHSDQKLKEILKKKTTLPETAFATA 381



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 10/124 (8%)

Query: 452 IDFAHNPFTMPQGGME---SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS----EVM 504
           +   H+    P        +L+  D   +   +++  C G E+ +     +      E++
Sbjct: 399 LIAPHHITDHPVETTPLCKTLRSGDTAFV--ERFESFCLGKELCNAYSELNDPIRQRELL 456

Query: 505 LQAFSNVGISKE-VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            Q  +   +  +            A   GMPP GG   G+DR+VM+L  A ++R+V  FP
Sbjct: 457 EQQHTKKELLPDSECHPIDEEFLEALCQGMPPAGGFGIGVDRLVMILTNAASIRDVLYFP 516

Query: 564 MSQN 567
           + + 
Sbjct: 517 VMRR 520


>gi|226304130|ref|YP_002764088.1| lysyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|229494517|ref|ZP_04388280.1| lysyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|226183245|dbj|BAH31349.1| lysyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|229318879|gb|EEN84737.1| lysyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 503

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 10/238 (4%)

Query: 31  RPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANII 90
           R  G + F  +++  G         +   E A +     V    G  +    E I++   
Sbjct: 74  RNTGKLCFATLQEGDGTQLQAMISLAGVGEEALAAWKSDVDL--GDFVFIHGEVISSR-- 129

Query: 91  TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRII 149
            G++ + A   +I S +          +E  E  R + R+ DL  R     N  KR  ++
Sbjct: 130 RGELSVMADAWQIASKSLRPLP--VAHKEMSEESRVRQRYADLIVRPEARDNARKRVAVV 187

Query: 150 NSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            ++R  + +  F+E  TP+L        AR F+  S       Y L  AP+ + +  +  
Sbjct: 188 RALRNALESRGFLEVETPMLQTLHGGAAARPFVTHSNALDIDLY-LRIAPELFLKRCVVG 246

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           G ++ F+I   FR+E   S   P EF  L+   ++   DD    +  +++ V +E   
Sbjct: 247 GIEKVFEINRNFRNEGVDSTHSP-EFAMLETYEAYGTYDDSAKMIRELVQEVAQEAFG 303



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 57/163 (34%), Gaps = 28/163 (17%)

Query: 407 LKFCSFAADARNHIAQELGIINCNC--FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
           L+           + +EL    C    +   ++ DFP               +P T    
Sbjct: 356 LEVPKDKGYGHGKLVEELWEHQCGDQLYVPTFVRDFP------------VETSPLT---- 399

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF-- 522
                + +        ++DL   GFE+A+G        +  + F +        ++    
Sbjct: 400 -----RDHRSKKGVTEKWDLYIRGFELATGYSELVDPVIQRERFVDQARLASAGDDEAMV 454

Query: 523 --GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                  A + GMPP  G   GIDR++M L G   +RE  LFP
Sbjct: 455 LDEEFLAAMEQGMPPTTGTGMGIDRLLMALTGLG-IRETILFP 496


>gi|220911109|ref|YP_002486418.1| lysyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219857987|gb|ACL38329.1| lysyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 512

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 61/293 (20%), Positives = 109/293 (37%), Gaps = 18/293 (6%)

Query: 5   RTHSCGDLGVSDV--------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD 55
           RTHS  ++             G  V ++G V  VR  G + F  +++             
Sbjct: 48  RTHSLAEVREKYAHLEADETTGDVVGVTGRVVFVRNTGKLCFATLQEGGTDGKGTRLQAM 107

Query: 56  SACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   + +   ++W   +D G  +    E I++    G++ + A+   + S A      +
Sbjct: 108 LSLANVGEEALADWKALVDLGDHVFIKGEVISSR--RGELSVMAESWGMASKALRPLPVL 165

Query: 115 FGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
               E  E  R + R++DL  RD   + +  R  I  S+R  +    ++E  TPIL    
Sbjct: 166 --HAELNEETRVRQRYVDLMVRDEAREMVYTRAAITRSIRETLFRHRYVEVETPILQLVH 223

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F             L  A + Y +  +  G DR + +   FR+E   S   P 
Sbjct: 224 GGALARPFETHMNAFDQKM-TLRIATELYLKRAVVGGIDRVYDMGRVFRNEGVDSTHSP- 281

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           EF  L+   ++ +Q  +   ++ ++    +    G TV      I  D     
Sbjct: 282 EFTTLECYEAWADQFVMAERIKEIILDAADAVGAGRTVQTEAGEINLDGDWAW 334



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 5/90 (5%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
               +DL+  G E  +         +  +  +         ++          RA + G 
Sbjct: 417 LIEAWDLIIGGMERGTAFSELIDPVIQRERLTEQSRHAAAGDDEAMQLDEDFLRALEYGA 476

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           PP GGI  GIDR+VML  GA  +RE  LFP
Sbjct: 477 PPMGGIGLGIDRLVMLFTGAG-IRETILFP 505


>gi|145357295|ref|XP_001422855.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144583099|gb|ABP01214.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 448

 Score =  150 bits (378), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 63/341 (18%), Positives = 118/341 (34%), Gaps = 68/341 (19%)

Query: 36  IIFLDIRDHYGITQVV--ANPDSACFEIAKS--VRSEWVLCIDGLVMSRSAETINANIIT 91
           + F+D+ D   I+ +    N  SA ++   +  V +   L + G +++       A    
Sbjct: 1   MAFIDLNDGSAISGMQAVVNEGSAAWDALDAGGVSTGAALRVKGKLVASPGGKQAA---- 56

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
              EL+ ++I+++  A+    P+  +R   E +R     L  R +T+      R ++  +
Sbjct: 57  ---ELAVEEIDVIGTADPETYPLQKKRHTLEYLR-SIAHLRPRTNTIGAVARVRNQLAYA 112

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG---------------------- 189
                    F+  +TPI+TAS  EGA +    + +  G                      
Sbjct: 113 THTFFQEHGFLYANTPIITASDCEGAGEQFQVTTLLNGFGAGEWTTPASVVDEQEAMNKD 172

Query: 190 -------SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   F+  P       Q    +MA   +  +   P FR E+  + R   EF+ ++ 
Sbjct: 173 GSIDYSQDFFGKPSYLTVSGQLNGEIMACAVNDIYTFGPTFRAENSNTSRHLAEFWMVEP 232

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL----------------------RI 277
           E++F + +D ++  E  L+               F                       RI
Sbjct: 233 ELAFADLNDDMDCAEAYLKYCLNHVLEHCDEDLEFFEKNISKDNLRERLRNVASQEFARI 292

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHN--VTEHFVHSEFRVFSK 316
            Y +A+      K     PI   +   +EH  +    VF  
Sbjct: 293 TYTEAVEHVLNAKKKFEFPIEWGSDLQSEHERYISEEVFKD 333



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+ +    VG+ K      +       + 
Sbjct: 353 NDDNKTVAAMDVLVPRVGELMGGSQREERLDVLERRIEEVGLEK----ESYWWYLDLRRY 408

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G  PH G   G +R+V  + G +N+R+   FP 
Sbjct: 409 GSQPHAGFGLGFERLVQYVTGVENIRDAIPFPR 441


>gi|297838599|ref|XP_002887181.1| hypothetical protein ARALYDRAFT_894608 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333022|gb|EFH63440.1| hypothetical protein ARALYDRAFT_894608 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 497

 Score =  150 bits (378), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 114/346 (32%), Gaps = 44/346 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G    G  V++SGWV + R  G     FL++ D      +    D++  +++K V +   
Sbjct: 48  GAGLAGQKVQISGWVKKGREQGKGTFAFLEVNDGSCAANLQVKVDASASDLSKLVTTGTS 107

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL--PLPVFGEREYPESIRFKY 128
           L ID  +               +IELSA+K+  +   ++         + +        +
Sbjct: 108 LTIDSCLKIPPQG----KATKQKIELSAEKVIDVGTVDQHGKTPYPIPKTKLTLEYLRDH 163

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-- 186
                R  T+      R +I  +        +     TPI+T S  EGA +    + +  
Sbjct: 164 TNFRARTTTMAAVTRIRHKICLAAHVFCDKHDICYIHTPIITTSDCEGAGEMFQVTTLIN 223

Query: 187 -----------------NQGSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
                                F+A         Q      A      +   P F+ E   
Sbjct: 224 QSDKLETGLPRKHGKIDYSQDFFARQAYLTVSGQLHAETYACSMGDVYTFGPTFQAEKSH 283

Query: 227 SDRLPGEFYQLDMEMSFVEQD-------DILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           + R   EF+ +++E++F   +       D +  M+NV                +F R+ +
Sbjct: 284 TSRHLAEFWMVEVELAFAGVEEAMNCCLDDMELMKNVDEACIHRL--QMVALTSFERVTH 341

Query: 280 DDAIRRYGTDKP---DLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
             AI              N +   M   +EH  H    ++ K + V
Sbjct: 342 TKAITLLEEAVAKGKKFENQVERRMDLASEHERHLTEVLYKKPVIV 387



 Score = 77.8 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 6/101 (5%)

Query: 472 NDLLSIKAFQYD-LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A  +D LV    E+  G  R    +V+++     G+  +  E          +
Sbjct: 402 NDDGETVA-AFDVLVPKVGELIGGSQREERMDVLMKRMEEKGLPIKEYE----WYIDLRR 456

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G   H G   G++R+++   G  N+R+V  FP      DL
Sbjct: 457 HGTVKHSGFGLGLERMLLFATGMDNIRDVIPFPRYPGRADL 497


>gi|255086471|ref|XP_002509202.1| predicted protein [Micromonas sp. RCC299]
 gi|226524480|gb|ACO70460.1| predicted protein [Micromonas sp. RCC299]
          Length = 405

 Score =  150 bits (378), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 62/261 (23%), Positives = 104/261 (39%), Gaps = 19/261 (7%)

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +   ++  E V+ I GLVM+        +     +EL AQ I  +S +E        +  
Sbjct: 3   KWVSNLTKESVVDIQGLVMA-PESGKVESCTQQDVELVAQSIYCVSRSEPRLPFEIDDAS 61

Query: 120 YPE---------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
            PE                 R  +R +DLR          ++ +    R  + A++F+E 
Sbjct: 62  RPETDFDKEDTTYVRVGQDTRLNHRVIDLRTPANQAIFRIQSAVCELFRDALRAQDFVEI 121

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP L   + EG            G    L Q+PQ YKQ+ + S  +R F+I P FR E+
Sbjct: 122 HTPKLIGGASEGGASVFKLDY--MGQPACLAQSPQLYKQMAVESDLERVFEIGPVFRAEN 179

Query: 225 PRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
             + R   EF  LDMEM+  E   ++L+ ++N+   +F+  +         +   +    
Sbjct: 180 SNTHRHLCEFTGLDMEMAIKEHYFEVLDVLDNLFLHMFDGLNERFKHELQVVSQQFPYEP 239

Query: 284 RRYGTDKPDLRNPIIMHNVTE 304
            +Y      L  P  +  + E
Sbjct: 240 LKYLRPTLRLEFPQGIAMLKE 260



 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 60/163 (36%), Gaps = 24/163 (14%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMES 468
                D      + LG +    ++     DF          K   A  PF TMP      
Sbjct: 266 VDPLGDLSTEHERILGQLVKEKYD----TDFYMLT------KYPAAARPFYTMPDPADPD 315

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
                     +  YD+   G EI SG  R H   ++ +     GI  + ++        A
Sbjct: 316 Y---------SNSYDIFIRGEEIISGAQRIHDPALLTKRAVECGIEVDTIQA----YIDA 362

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           F+ G  PHGG   G++R+VML L   N+R+ S+FP        
Sbjct: 363 FKYGALPHGGCGVGLERVVMLFLNLGNIRKTSMFPRDPRRLAP 405


>gi|50552304|ref|XP_503562.1| YALI0E04939p [Yarrowia lipolytica]
 gi|49649431|emb|CAG79143.1| YALI0E04939p [Yarrowia lipolytica]
          Length = 473

 Score =  150 bits (378), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 127/358 (35%), Gaps = 48/358 (13%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +++ +T +   LG  D  S V ++GW+  V+    + FL+I D      V+A        
Sbjct: 21  INQIKTENKHILGTQDA-SPVTINGWIKSVQKLKNVAFLNISDGNCAQGVMAVLQP---- 75

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                         G  +S     +++      +EL A+ +++    +E P+     +  
Sbjct: 76  -----DQVTSDLTTGACVSVKGNLVSSQGKKQGLELQAESVKVTGTVDEYPIQKKFHK-- 128

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            +        L  R       +  R+  +  M       +F++ + P+LT+S  EGA + 
Sbjct: 129 -QEFLRTLPALRWRTSVNSSTLRYRSFCMAQMTNFFAENDFVQTNPPLLTSSDCEGAGEV 187

Query: 181 LVPSRVNQGSF-----YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
              +   +G        A      Q    ++A+   R +   P FR E+  ++R   EF+
Sbjct: 188 FKVAGGGKGDKFFGDKPAYLTVSTQLHLEVLAAAVGRVWTFTPAFRAENSDTNRHLSEFW 247

Query: 236 QLDMEMSFVEQ-DDILNTMENVLRGVF------------------------EEFSN-GNT 269
             + E+SF++  + +++  E +++                           EE  +  + 
Sbjct: 248 MAEAEISFIDDLEPLMDLAEGMVKSCLAPLMEEGNKARNDLLDARRSAEQKEELLDRWDM 307

Query: 270 VSNNFLRICYDDAIRRYGTDKPD----LRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
            + +F R+ Y  AI+             R    +   +EH        F   + V   
Sbjct: 308 ANCDFPRLTYKQAIKILNLQHLKEPFAHRPDYEVGLRSEHEKWLATEYFISPVFVTDY 365



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 88/242 (36%), Gaps = 45/242 (18%)

Query: 339 AFCDRMN---EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
           +F D +    + A    +  LA +     E GN A    +    +    E +  R DM +
Sbjct: 254 SFIDDLEPLMDLAEGMVKSCLAPLM----EEGNKARNDLLDARRSAEQKEELLDRWDMAN 309

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQ----ELGIINCNC--------FEFCWIMDFPFY 443
            D         +K  +     +   A     E+G+ + +             ++ D+P  
Sbjct: 310 CDFPRLTYKQAIKILN-LQHLKEPFAHRPDYEVGLRSEHEKWLATEYFISPVFVTDYP-- 366

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSE 502
              +E+K       PF M Q        +   S     +DL+     E+  G +R    +
Sbjct: 367 ---KEQK-------PFYMKQ--------SPHDSQTVACFDLLMPHIGEVIGGSVREDNYD 408

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +L+     G+ K  +E          + G  PHGG   G +R++    G +N+R+V+ F
Sbjct: 409 TLLKNIETTGMDKSALE----WYLELRKQGSTPHGGFGMGFERLISYATGIENIRDVTAF 464

Query: 563 PM 564
           P 
Sbjct: 465 PR 466


>gi|289621241|emb|CBI52024.1| unnamed protein product [Sordaria macrospora]
          Length = 598

 Score =  150 bits (378), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 14/252 (5%)

Query: 15  SDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQ--VVANPDSACFEIAKSVRSEWVL 71
                 V + G V  VR  G  ++FLD++  +   Q     N            R+   L
Sbjct: 75  KHADEEVIIHGRVQSVRRAGNKLMFLDLKGEFEHVQGLCNFNKLQVTGVELGEFRTLAKL 134

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRF 130
              G ++S +         TG++ + A ++ E+L+ A          +   E +R ++R 
Sbjct: 135 LNRGDIVSITGRA--TKTPTGELSIEATRLPELLTPALAPLPF----KLEDEEVRIQHRH 188

Query: 131 LD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP--SRVN 187
           +D L        +  R+ +I  +R  +    F+E  TPIL  S+            S  +
Sbjct: 189 VDMLVNRKTIDTLRLRSHLIKYLRDFLHERGFLEFQTPILAESASGATARPFTTAASETS 248

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
                A+  AP+ + + L+  G D+ F++ P FR+E       P EF   +   ++   D
Sbjct: 249 VNKNLAMRIAPELWLKRLVVGGVDKVFELGPAFRNEGIDQTHNP-EFTMCEFYNAYANLD 307

Query: 248 DILNTMENVLRG 259
           D++   E +L G
Sbjct: 308 DLIALTEELLCG 319



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 46/135 (34%), Gaps = 15/135 (11%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F E     K +   H+P  M     +S          + + +L  NG E+A+     +  
Sbjct: 408 FLEPYSLTKPLFITHHPVCMS-PLSKSFVCPKTGQRVSARTELFVNGKELANMYEEENDP 466

Query: 502 EVMLQAFSN--------------VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
                 F +                   E          +A + G+PP GG   GI+R+V
Sbjct: 467 VSQRAKFLDQLNTAKREGLAPGVYNEEGESAMEVDESYVQALESGLPPTGGWGCGIERMV 526

Query: 548 MLLLGAKNVREVSLF 562
           ML  G K + +   F
Sbjct: 527 MLFSGTKRISDCLSF 541


>gi|119718566|ref|YP_925531.1| lysyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|119539227|gb|ABL83844.1| lysyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 516

 Score =  150 bits (378), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 103/264 (39%), Gaps = 20/264 (7%)

Query: 5   RTHSCGDLGV--------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           RTH+  D+           +    V ++G V  VR  G + F  +++  G          
Sbjct: 51  RTHTLADVREAWGHLEAAEETQDVVGVAGRVVFVRNTGKLCFATLQEGIGT---RLQVML 107

Query: 57  ACFEIAKSVRSEWVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
           +  E+ +    +W   +D G  +      I++    G++ + A    + S A      + 
Sbjct: 108 SLAEVGEEALDDWKHTVDLGDHVFVEGRVISSK--RGELSVMASSWSMASKALRPLPVL- 164

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SS 173
             +E  E  R + R+ DL      +++V+ R  ++ S+R  +    F+E  TPIL     
Sbjct: 165 -HKELSEESRVRQRYADLIVRQEARDMVRTRAAVLRSIRSTLDDAGFVEVETPILQMMHG 223

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F             L  A + + +  +  G DR +++   FR+E   S   P E
Sbjct: 224 GAAARPFGTHLNAFDQDM-TLRIALELFLKRAVVGGVDRVYELGRIFRNEGVDSTHSP-E 281

Query: 234 FYQLDMEMSFVEQDDILNTMENVL 257
           F  L+   ++ +Q       + ++
Sbjct: 282 FTMLEFYEAYGDQFTAAERTKAIV 305



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 68/208 (32%), Gaps = 32/208 (15%)

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCS---FAADARNH 419
           +D SG    + P+A  ++    E I       +  +   +             A +    
Sbjct: 326 IDLSGEWRWL-PIADAVSDALGEQISTDETADNAAALRRLGEARDIALKPTWGAGEIILE 384

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + ++L  +     +  ++ D+P     E  + +   H                       
Sbjct: 385 LYEQL--VEHTLIQPTFVCDYP-----ESVRPLARPHR----------------TTPGLV 421

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPP 535
             +DL+  G E+A          +  +  +   +                 RA + G PP
Sbjct: 422 EAWDLIIGGMELAPSYSELVDPVIQRERLTEQSLLAAGGDAEAMQLDEDFLRALEYGAPP 481

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG   G+DR+VMLL G   +RE  LFP
Sbjct: 482 MGGTGIGVDRLVMLLTGVG-IRETILFP 508


>gi|167390996|ref|XP_001739593.1| aspartyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165896669|gb|EDR24016.1| aspartyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar
           SAW760]
          Length = 544

 Score =  150 bits (378), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 77/412 (18%), Positives = 143/412 (34%), Gaps = 85/412 (20%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAK---S 64
             +L  +     V +   V  VR  G ++FL +R   Y    +V   ++   E  +    
Sbjct: 49  IEELVPAIAEQTVTVRARVQAVRGKGNMVFLFLRKGIYTCQALVMKSETISKEFVQFCQK 108

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI----------------------- 101
           + +E +  I G+V +       A     +I +++ ++                       
Sbjct: 109 ISAESICDITGIVKAVEKPIEKATQQDVEIHVTSIEVISLAEYPLPMQIEDLTFPSSVFK 168

Query: 102 ---EILSVAEELPLPVFGERE----------------------------YPESIRFKYRF 130
              E ++  +E       + E                              +  R   R 
Sbjct: 169 KQEEDIAKVDEKIAKFLKDNEGKDLTKRPLKDEYAKLLKEKASAQKYVKVSQDTRLDNRM 228

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LDLR  T       ++      R  + ++ F+E  TP L   S EG  +       ++ +
Sbjct: 229 LDLRTVTNIAIFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSSEGGSNIFEVKYFDRKA 288

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDI 249
           + A  Q+PQ YKQ+ +   F + F++ P FR E+  + R   EF  LD+EM  VE   + 
Sbjct: 289 YLA--QSPQLYKQMAIMGDFRKVFEVGPVFRAENSNTRRHLTEFEGLDIEMEIVENYHEC 346

Query: 250 LNTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRYG------T 288
           ++ ME +   +F+E                         FLR+ Y +AI           
Sbjct: 347 IDVMEKLFTFIFDEIPKRFPDELKVIRKQYPFEDLVYRPFLRLTYKEAIEMLRAAGETIG 406

Query: 289 DKPDLRNP--IIMHNVTEHFVHSEFRVFSK-ILSVNPGYEVWAIPAKGGGGN 337
           D  D   P  + +  + +   +++F +  K   ++ P Y +  I       +
Sbjct: 407 DYDDFSTPQEVKLGELIKAKYNTDFYILDKFPAAIRPFYTMPDIDDPNYSNS 458


>gi|313792704|gb|EFS40785.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|315078816|gb|EFT50838.1| lysyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|327457213|gb|EGF03868.1| lysyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
          Length = 494

 Score =  150 bits (378), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 63/293 (21%), Positives = 113/293 (38%), Gaps = 18/293 (6%)

Query: 2   HRYRTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV--VANPDS 56
            +Y T   G+L +    +    V + G V  VR  G + F  ++D +  T          
Sbjct: 34  QKY-TDDTGELTLAPGEETTDEVTVGGRVVFVRNTGKLCFASLQDGFTETSNGERLQIML 92

Query: 57  ACFEIAKSVRSEWVLCID--GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           +  E+     + W   +D    V +R    ++     G++ + A +  + S A      +
Sbjct: 93  SKAEVGDESLAAWKSDVDLGDHVWARGRVVVSRR---GELSIMAAEWRMASKALRPLPTL 149

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-AS 172
              +E  E  R + R+ DL      + +V+ R  I  ++R  +    F+E  TPIL    
Sbjct: 150 --HKELSEESRVRRRYADLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPILQLVH 207

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F            +L  A + Y +  M  G DR +++   FR+E   S     
Sbjct: 208 GGAAARPFNTHLNAFDIDM-SLRIALELYLKRTMVGGTDRVYEMGRVFRNEGIDSS-HSA 265

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           EF  L+  MS+  Q  I   +++++  V +   + + +      I  D   R 
Sbjct: 266 EFSMLEAYMSWGNQFTIAEVIKDIIMAVADAL-DVHQIETPKGTIDLDGQWRW 317



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 28/157 (17%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             A      +  EL  +        ++ D+P        + +   H              
Sbjct: 356 WEAGKVVMELFGEL--VEPGLINPTFVCDYP-----AIAQPLARPHR------------- 395

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLY 526
            +D   ++A  +DL+  G E  +G        +  +  +   ++                
Sbjct: 396 -DDPRMVEA--WDLIIGGMERGTGFSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFL 452

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + G PP GG+  G+DR+VML   A  +RE  LFP
Sbjct: 453 EALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFP 488


>gi|171686828|ref|XP_001908355.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943375|emb|CAP69028.1| unnamed protein product [Podospora anserina S mat+]
          Length = 573

 Score =  150 bits (378), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 65/288 (22%), Positives = 108/288 (37%), Gaps = 26/288 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP-DSACFEIAKSVRSEWVLCIDG 75
           +G  V++ G +HR+R      FL+I+D YG  Q +    D      A     E  L + G
Sbjct: 142 IGKRVKVFGRIHRIRVQKAATFLEIKDGYGKLQCILPAGDLTRNHDALLFAQETALAVYG 201

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFL 131
           L+          +      EL     E++  A    E     V  +++  E+     R L
Sbjct: 202 LLKRVPEGAEAPDGR----ELHVDYFEVVGGAPSDLEAFSNKVSKDQDPWEASMLDNRHL 257

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR D     +  R  I  +         F + S P +  +  EG           + ++
Sbjct: 258 VLRGDNASAVMKLREAIELAFVDSYREMEFTKVSPPAMVQTQVEGGSTLFGFPYYGEEAY 317

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y + ++ S     + I   FR E   + R   E+  ++ EM F+E DD+L 
Sbjct: 318 --LTQSSQLYLETVIQS-LGNVYCIEKSFRAEKSLTRRHLSEYTHVEAEMDFIEFDDLLE 374

Query: 252 TMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRR 285
            +E ++  V ++                     S  F+R+ Y DAI  
Sbjct: 375 HIEELICRVVDKVLANPTSAAYLKLLNPGFQKPSRPFMRMRYADAIDW 422



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 16/128 (12%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++ P +               F M +   + L+  + + +      L+    EI  G +
Sbjct: 455 IINRPIFL-----THFPVEIKAFYMQK-DPKDLRVTESVDV------LMPGVGEIVGGSM 502

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R    E +++A+    I        +       + G  PHGG   G++R +  +     V
Sbjct: 503 RMFDYEELIEAYKKNDIG----HEPYYWYTEQRKYGTSPHGGYGLGLERFIAWIANQHTV 558

Query: 557 REVSLFPM 564
           R  SL+P 
Sbjct: 559 RTCSLYPR 566


>gi|320169209|gb|EFW46108.1| lysyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 583

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 13/246 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + LSG +   R     +F  +       Q+V        E    +R+       G ++  
Sbjct: 176 IALSGRIDSKRSSAKTLFYHLVHGEHRLQIVCTERRHDPEEFALLRT---GLHRGDIVHV 232

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH- 139
                   +  G++ L++ +  +L+      +P    +     IR + R LD+  +    
Sbjct: 233 VGYPFLTQM--GELSLASVRTRVLAPC----IPDIPFKLTDPDIRARQRALDMLANPQLI 286

Query: 140 -KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQA 197
            + +  R  I  S+R  M A+ FIE  TP L A +    AR F+  +R   G    L  A
Sbjct: 287 PRMLKTRHAIFRSIRRMMDAQGFIEVETPSLCALAGGANARPFITKARAISGHPLNLRIA 346

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+  G DR ++I   FR+E   +D  P EF  ++M  ++   DD+ +  E++L
Sbjct: 347 PELYLKQLVIGGIDRVYEIGKQFRNEGMDADHHP-EFTTMEMYQAYANFDDLFDFTESLL 405

Query: 258 RGVFEE 263
                E
Sbjct: 406 VSTLNE 411


>gi|189202702|ref|XP_001937687.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187984786|gb|EDU50274.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 551

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 71/292 (24%), Positives = 123/292 (42%), Gaps = 33/292 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSE 68
            S+    +    WV   R     + FL++R +   I  VVA  D    ++ K   +V +E
Sbjct: 86  ASNEDKEITFRCWVENARVQSAKLAFLNLRQNLSTIQAVVAASDKLSKQMVKFCGNVSTE 145

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE----------ELPLPVFGER 118
             L + G+V        +A+I     E+  QK+ + + AE          E PLP     
Sbjct: 146 STLVVTGIVKRVKEPIKSASIT--DFEIHIQKLFVEATAEIPLPLQVSDAERPLPNDAAV 203

Query: 119 EYPESI-------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
           E  E +             R   R +DLR        V ++ +    +  +  + F+   
Sbjct: 204 EEDEKVEEGSERPLVSLNTRLNNRTIDLRAKINQAIFVIKSGVCALFQEFLSKKGFVLVH 263

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP +  ++ EG  +        + ++ A  Q+PQ YKQ+L+AS F +  +I P FR E+ 
Sbjct: 264 TPKILGAASEGGANVFELKYFGRPAYLA--QSPQFYKQMLIASRFQKVMEIGPVFRAENS 321

Query: 226 RSDRLPGEFYQLDMEMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            + R   EF  LD+EM F E   +++  +E+++  +F E +         +R
Sbjct: 322 NTARHLTEFTGLDLEMEFQENYHEVMGVLEDLMLFIFNELNTRYKKETELVR 373



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 52/149 (34%), Gaps = 22/149 (14%)

Query: 422 QELGIINCNCFEFCWIM--DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           ++LG +    +   +     FP                 +TMP     +L         +
Sbjct: 420 KKLGRLVLEKYNTDFYTLDQFPL-----------AIRPAYTMPSPADPAL---------S 459

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+   G EI SG  R H S ++           +            F+ G PPH G 
Sbjct: 460 NSYDMFMRGQEICSGAQRIHDSALLADQMRKHDPPIDPAGAGTKDYVDCFKYGCPPHAGG 519

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             G++RIV   LG  N+R  SLFP     
Sbjct: 520 GFGLERIVQFWLGLPNIRMCSLFPRDPQR 548


>gi|266623561|ref|ZP_06116496.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288864661|gb|EFC96959.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 157

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 87/149 (58%), Gaps = 4/149 (2%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC---FE 60
            R+H C ++  S+VG  V + GWV + R  GGIIF+D+RD  GI Q++          F 
Sbjct: 9   KRSHRCTEVTSSNVGETVTVMGWVQKSRNKGGIIFVDLRDRSGILQIIFEESDCGAESFA 68

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A+ +RSE+V+ + G V  R A  +N N+ TG IE+ A+ + ILS +E  P P+    + 
Sbjct: 69  KAEKLRSEFVIAVTGHVEKR-AGGVNENLATGDIEVRAESLRILSESETPPFPIEENSKT 127

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRII 149
            E +R KYR+LDLRR  + +NI+  ++  
Sbjct: 128 KEELRLKYRYLDLRRPDIQRNIMVGSQAA 156


>gi|225684263|gb|EEH22547.1| asparaginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 580

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 68/352 (19%), Positives = 122/352 (34%), Gaps = 33/352 (9%)

Query: 12  LGVSD---VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           L  SD    G+ VR+ G VH +R    +IF+ + D YG+ Q +   D        ++  E
Sbjct: 146 LRPSDGDTPGTRVRVVGRVHHLRSQKDMIFVTLSDGYGLLQCIFTGDLVKTYDMMTLTLE 205

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRF 126
             + I G + +        N      EL A    I+  A  ++  +     R+      +
Sbjct: 206 TSIAIHGEMRAVP----PMNHAYDDRELHADFFTIIGRAAGDKEAITTRVARDSDPHTLY 261

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR +T    +  R   + + R     +  +E + P +  +  EG          
Sbjct: 262 DNRHLVLRGETSSSVMKVRAATLRAFRKAFEEKGMLEVTPPAMVQTQVEGGSTLFEFDYY 321

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            + ++  L Q+ Q Y +  + S     F + P FR E   + R   E+  ++ E+ F+  
Sbjct: 322 GEKAY--LTQSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEYTHVEAELDFISF 378

Query: 247 DDILNTMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKP- 291
            D+L+ +E+++  V +                      S  F R+ Y +AI         
Sbjct: 379 TDLLDHLEDMICRVIDLVLSEPLIAQYVKNLNPTFTLPSRPFKRMKYAEAIEWLVEHNIP 438

Query: 292 -----DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
                  R    +    E    ++       L+  P         K     R
Sbjct: 439 NEEGQPHRFGDDIAEAAER-KMTDMLSRPIFLTHFPTEIKAFYMKKDPDDPR 489



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 46/122 (37%), Gaps = 7/122 (5%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
           +  F  +  T  +        +D    ++   D++  G  EI  G +R    + ++ A+ 
Sbjct: 465 RPIFLTHFPTEIKAFYMKKDPDDPRVTESV--DVLMPGVGEIVGGSMRMDDWDELMAAYK 522

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G+        +       + G  PHGG   G++R +  + G   VRE  L+P     C
Sbjct: 523 REGMDPSP----YYWYTDQRKYGTSPHGGYGLGLERFLAWMCGRYTVRECCLYPRFTGRC 578

Query: 570 DL 571
             
Sbjct: 579 TP 580


>gi|72080735|ref|YP_287793.1| asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|123747980|sp|Q4A7W9|SYN_MYCH7 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|71913859|gb|AAZ53770.1| asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 449

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 96/262 (36%), Gaps = 12/262 (4%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVLCIDGL 76
             V + GW+  +R +  IIF+++ D      +      +   F+  +++     + I G+
Sbjct: 18  KKVLIQGWITNIRGNLKIIFVELNDGSSFKNLQCVLKKEFIDFDKIENLALGVAVEISGI 77

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
             +               E+  + +EI         P+   +E    +  +      R  
Sbjct: 78  FSNTPERQQFG-------EVLVETLEIKGNNYNTNFPIQ-NQEISLEVLRQMPHFRHRSR 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R+ +   +      + FI  S PILT++  EGA +  +    N+  F     
Sbjct: 130 LFRAIMKLRSALFFEIHKFFRRQGFINFSAPILTSNDGEGAGEVFIVDDENKDFFNKKTT 189

Query: 197 --APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
                Q      A GF + +  AP FR E   + R   EF+ ++ E++F   + I+    
Sbjct: 190 LGVTGQLHAEAYALGFKKVYTFAPTFRAERSNTRRHAAEFWMIEPEVAFFTLEQIIELAV 249

Query: 255 NVLRGVFEEFSNGNTVSNNFLR 276
            +L+ V +     N     FL 
Sbjct: 250 KLLQKVIKSVIIRNKDEFIFLE 271



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 481 QYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
            +DL+  G  E+  G  R    E +L   + + ++       F       + G P   G 
Sbjct: 362 AFDLLVPGIGELIGGSQREVRYEKLLARMNELNMNI----EEFQWYLDLRKYGNPGSSGF 417

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             G +R++M + G +N+R+V  FP +  
Sbjct: 418 GLGFERLLMYITGIENIRDVIPFPRTNK 445


>gi|146093432|ref|XP_001466827.1| lysyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134071191|emb|CAM69876.1| putative lysyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 536

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/236 (22%), Positives = 104/236 (44%), Gaps = 13/236 (5%)

Query: 33  HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITG 92
            GGI+F+ IR      QV+   + +  +    +R+       G ++  +   +      G
Sbjct: 1   MGGILFITIRSGEAQLQVLRQVNESFTKA--DLRAFASTLHTGDILGATG--VPGRTAKG 56

Query: 93  QIELSAQKIEILS---VAEELPLPVFGER--EYPESIRFKYRFLDLRR-DTLHKNIVKRT 146
           ++ L A +  IL+     ++   P            I+++YRF+D+    ++ +   KR 
Sbjct: 57  ELSLYATEASILAPYVCTDQALCPDLKGFVPLTDTGIKYRYRFVDMMSSPSVVQRFRKRH 116

Query: 147 RIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
            I  ++R  + A +F+E  TP+L + +S   A+ F+     N    + L  AP+ + +  
Sbjct: 117 AITRALRDFLDARSFVEVETPVLHSVASGANAKPFVTHHNANDADLF-LRVAPELHLKQC 175

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           +  G +R ++I   FR+ED      P EF   +   ++    D++   E +LR + 
Sbjct: 176 VVGGMERVYEIGRVFRNEDADRSHNP-EFTTCEFYAAYHTYKDLMTMTEEILRHLA 230



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 51/141 (36%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           I     E  ++ D P +                 M    ME           + +++L  
Sbjct: 319 ITDRVVEPTFVTDHPLF-----------------MSPLAMEQR----TRPGLSARFELFI 357

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAG 542
           NG E  +     +  +     F    + ++  ++          +A Q G+PP  G   G
Sbjct: 358 NGTEYCNAYSELNDPQEQYYRFQQQLLDRQTGDDEAMALDETFLKALQVGLPPTAGWGMG 417

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR+ MLL G+  +RE  LFP
Sbjct: 418 IDRVAMLLNGSSTIREDILFP 438


>gi|315051948|ref|XP_003175348.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311340663|gb|EFQ99865.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 947

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 68/306 (22%), Positives = 121/306 (39%), Gaps = 26/306 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH----YGITQVVAN-PDSACFEIAKSV 65
           +     G  +     +H VR  G    FL  R       G+     N   +     A+ +
Sbjct: 132 ITDQMQGQELTFRARLHVVRRMGAKFAFLVFRQQVHTLQGVLHTKPNLRSANMIYWAERI 191

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEI---------LSVAEELPLPVFG 116
               +L + G + +         I   ++E+  +++ +          SV E        
Sbjct: 192 PVGSILKVKGRLKAPEVPVFGTTIHNLELEI--EELHVSVRREEPAPFSVYEAELAGAHE 249

Query: 117 ER------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           ER      + P+  R   R LDLR DT       ++ I    R  + A+NFIE  TP L 
Sbjct: 250 ERLEGIRQKIPDRTRLSNRILDLRTDTSQSIFRIQSAISTMFRSALDAQNFIEIHTPKLQ 309

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           A++ E        +   + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R 
Sbjct: 310 AAATESGASVFGVNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRH 367

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             E+  LD+EM+  E   + L  ++ VL+ +F+       +    ++  +      +  +
Sbjct: 368 LTEYTGLDIEMAIEEHYHEALEVLDGVLKSIFKTIYEKYRLEIEVIKHHFPSEDLVWLEE 427

Query: 290 KPDLRN 295
            P +  
Sbjct: 428 TPIISF 433



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 61/156 (39%), Gaps = 28/156 (17%)

Query: 415 DARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN 472
             R+ I   LG ++        +I+D           K      PF  MP    E L   
Sbjct: 460 GTRDEI--RLGELVKEKYHTDYYILD-----------KFPAVARPFYAMPHPDDERL--- 503

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                    +D+   G EI SGG R H  +++ +    VGI    +E         F+ G
Sbjct: 504 ------TLSFDIFVRGQEIVSGGQRIHDPDLLEKRMREVGIEPSTMEE----YMEGFKWG 553

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            PPH G   G++R++ML+L   N+R  SLF      
Sbjct: 554 APPHAGAGIGLERLLMLILKLGNIRLGSLFHRDPKS 589


>gi|159130672|gb|EDP55785.1| lysyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
          Length = 478

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 69/307 (22%), Positives = 120/307 (39%), Gaps = 20/307 (6%)

Query: 25  GWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAE 83
           G +   R  G  +IF DI       QV+ N          + +  + L   G   S +  
Sbjct: 26  GRIRAYRLAGSKLIFFDIFQDGHKVQVMCNIRKLDGVAPDAFKRFYRLLRRGDTFSVTGN 85

Query: 84  TINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIV 143
                  TG++ + A ++  L       +PV  E           R +    D    +I+
Sbjct: 86  PH--RTGTGELTVLATELPRLLAPCLHDVPVDAEEHETSPYP---RHVQFLADQKAADII 140

Query: 144 K-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQY 201
           + R+ II  +R   +  +F+E STPI+ + +    AR F   +        +L  AP+ +
Sbjct: 141 RARSAIIQFLRQFFLDRSFMEVSTPIIGSIAGGAIARPFQTSATEFPDRQLSLRIAPELW 200

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+  GFD+ F+I P FR+E       P EF   +   ++   +D+++  EN+L G+ 
Sbjct: 201 LKRLVVGGFDKVFEIGPSFRNEGLDKTHNP-EFTTCEFYHAYANLEDLMSITENLLSGMA 259

Query: 262 EEFSNGN----------TVSNNFLRICYDDAIR-RYGTDKPDLRNPIIMHNVTEHFVHSE 310
                 N            S  F R+ +   I  + G   PDL  P  +  V++ F    
Sbjct: 260 AHIQEFNKNASLKPPEVDFSAPFRRVDFTTGIEGKIGRRLPDLTTPDALDQVSQLFRDLS 319

Query: 311 FRVFSKI 317
             +  + 
Sbjct: 320 LPIPKEP 326



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 3/87 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS---NVGISKEVVENRFGGLYRAFQCGMPP 535
           A + +L  +G EI +     +      + F          +           A + G+P 
Sbjct: 374 AARAELFIDGREIVNTYEEENSPFEQRRKFEDQVRYTKGTDEPAEIDESYLEALEWGLPS 433

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLF 562
            GG   GIDR+ ML  G K + +V  F
Sbjct: 434 TGGWGCGIDRLCMLFTGTKRIGDVLPF 460


>gi|304373317|ref|YP_003856526.1| Lysyl-tRNA synthetase 1 [Mycoplasma hyorhinis HUB-1]
 gi|304309508|gb|ADM21988.1| Lysyl-tRNA synthetase 1 [Mycoplasma hyorhinis HUB-1]
          Length = 492

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/285 (21%), Positives = 120/285 (42%), Gaps = 15/285 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + ++G +  +R      F+ I  ++   Q+  +      E  K +     L   G ++  
Sbjct: 60  INVAGRIVAMRGP----FIIINSYFDKIQLYYDKKLLQIEENKDLFE---LLDLGDIIQ- 111

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
            A+ +     T ++ L   K+++L+ A + PLP           +++ R+LDL  +   K
Sbjct: 112 -AQGVVFKTKTNELSLKVNKLQLLTKALK-PLPDKFHGINDVDEKYRKRYLDLISNPETK 169

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAP 198
                RT+II+ +R  +   N++E +TPIL +  +   AR F         +FY L  A 
Sbjct: 170 QVFFTRTKIISLIRQFLDNLNYMEVTTPILQSLLTGASARPFTTFYNSLHANFY-LRIAT 228

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L+  G DR ++I   FR+E   +   P EF  ++   ++   + ++   E + +
Sbjct: 229 ELPLKKLLVGGLDRVYEIGKIFRNEGVDTTHNP-EFTSIEFYEAYANLETMMERTEAIFK 287

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            + ++  N       F     D  +     D  D  + I+  N+ 
Sbjct: 288 FLVDKL-NIKNKKIVFSEYEIDFNLPFNKFDLVDKTSEILGINLK 331



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 11/129 (8%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            +E   E K I       +P  +    +      D       + +L     E A+     
Sbjct: 362 LFEEFVEPKLIQPTFVYGHPIEISP--LAKKDEKDPR--FTQRAELFIAKKEFANMFNEL 417

Query: 499 HMSEVMLQAF----SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +  E  LQ F        +  E           + + GMPP GG   GIDR+VMLL    
Sbjct: 418 NDPEDQLQRFENQIKEKDLGNEEANEIDYDFVDSLKYGMPPAGGCGIGIDRLVMLLTSKT 477

Query: 555 NVREVSLFP 563
           ++REV LFP
Sbjct: 478 SIREVILFP 486


>gi|116182572|ref|XP_001221135.1| hypothetical protein CHGG_01914 [Chaetomium globosum CBS 148.51]
 gi|88186211|gb|EAQ93679.1| hypothetical protein CHGG_01914 [Chaetomium globosum CBS 148.51]
          Length = 587

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 54/270 (20%), Positives = 104/270 (38%), Gaps = 17/270 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDHY----GITQVVANPDSAC 58
           +R               V L G V  +R     ++FL +   +    G+       D   
Sbjct: 60  FRKKYADVQHGDVAEEEVTLHGRVDSIRRASSKLVFLHLESEFERTQGVCNFGKFEDGTS 119

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGE 117
            +  K +     L   G ++S   + I  +  TG++ + A  + +IL+ +    +     
Sbjct: 120 VDALKDL---AALLKRGDIISIKGKAIRTS--TGELSIQATHLPKILTPS----IIPLPT 170

Query: 118 REYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           +   E  R ++R +D L        +  R+ +   +R  +   +F+E  TPIL   +   
Sbjct: 171 KLIDEESRMQHRHIDMLVNPRTRDILRLRSYLTKYLRDFLHERDFLEFQTPILAGDAGGA 230

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                  S        +L  AP+ + + L+  G DR F++ P FR+E       P EF  
Sbjct: 231 NARPFTVSAKTISRDVSLRIAPELWLKRLVVGGVDRVFELGPAFRNEGIDQTHNP-EFTI 289

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
            +   ++    D+++  E+++RG      N
Sbjct: 290 CEFYHAYANLQDLISLTEDLIRGAAAHCQN 319



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 45/139 (32%), Gaps = 21/139 (15%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E       +   H+P  M     +S          + + +L   G E+A+     +    
Sbjct: 403 EPRSAHAPLFITHHPVCMS-PLSKSFTCPRTGQAVSARTELFMAGRELANMYEEENDPFE 461

Query: 504 MLQAFSNVGISKEVVENRF--------------------GGLYRAFQCGMPPHGGIAAGI 543
             + F+    +K   +                           RA   G+PP GG   G+
Sbjct: 462 QRRKFAEQLAAKTKGKAADVSGGGDGDVGEPASDGGAIDESYVRALASGLPPTGGWGCGV 521

Query: 544 DRIVMLLLGAKNVREVSLF 562
           +R+VML  G + + +   F
Sbjct: 522 ERLVMLFGGTRRIGDCLSF 540


>gi|169595242|ref|XP_001791045.1| hypothetical protein SNOG_00355 [Phaeosphaeria nodorum SN15]
 gi|111070730|gb|EAT91850.1| hypothetical protein SNOG_00355 [Phaeosphaeria nodorum SN15]
          Length = 551

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 66/289 (22%), Positives = 118/289 (40%), Gaps = 30/289 (10%)

Query: 14  VSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSE 68
             +    +    WV   R     + FL++R     +  VVA  +    ++ K   SV +E
Sbjct: 89  SENEDKEITFRCWVENARVQSAKLAFLNLRQGLNTVQAVVAASEKLSKQMVKYCGSVSTE 148

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE------ 122
             L + GLV        +A+I     E+  QK+ I   A+        + E P       
Sbjct: 149 STLLVTGLVKRVKEPIKSASIK--DFEIHVQKLFIEVKADVPLPLQVEDAERPLPTTEEE 206

Query: 123 --------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                         + R   R +DLR        V ++ +    +  +  + F+   TP 
Sbjct: 207 QQQEEGDKQPLVSLNTRLNNRTIDLRAKINQSIFVIKSGVCAIFQEFLSKKGFVLVHTPK 266

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           +  ++ EG  +       ++ ++ A  Q+PQ YKQ+L+AS F +  +I P FR E+  + 
Sbjct: 267 ILGAASEGGANVFELKYFDRPAYLA--QSPQFYKQMLIASRFQKVMEIGPVFRAENSNTA 324

Query: 229 RLPGEFYQLDMEMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           R   EF  LD+EM F E   +++  +E+++  +F E +         +R
Sbjct: 325 RHLTEFTGLDLEMEFQENYHEVIRVLEDLMLFIFTELNARYKKETELVR 373



 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 44/115 (38%), Gaps = 9/115 (7%)

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
                +TMP      L         +  YD+   G EI SG  R H S+++         
Sbjct: 443 AIRPAYTMPSPADPLL---------SNSYDMFMRGQEICSGAQRIHDSKLLASQMRKHDP 493

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             +            F+ G PPHGG   G++RIV   LG  N+R  SLFP     
Sbjct: 494 PIDPESAGTKDYVDCFRFGCPPHGGGGFGLERIVQFWLGLPNIRMCSLFPRDPQR 548


>gi|317507814|ref|ZP_07965515.1| lysyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316253856|gb|EFV13225.1| lysyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 501

 Score =  149 bits (377), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 96/235 (40%), Gaps = 12/235 (5%)

Query: 31  RPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANI 89
           R  G ++F  ++   G   Q + + +    E     +++  L   G ++    E I++  
Sbjct: 73  RDAGKLLFATLQAGDGSRLQAMISLNGIGEEALARWKADVDL---GDIVFVRGEVISSK- 128

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRI 148
             G++ + AQ  +    A+ L       +E  E  R + R+LDL  R         R  +
Sbjct: 129 -RGELSVMAQSWQF--AAKALRPLPVAHKELSEETRVRQRYLDLIMRPEARAMARTRVAV 185

Query: 149 INSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           +  +R  +    F+E  TPIL        AR F+  S      FY L  AP+ + +  + 
Sbjct: 186 LRELREALGRRGFLEVETPILQTIQGGASARPFVTHSNALDIDFY-LRIAPELFLKRCLV 244

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            G +R F+I   FR+E   +   P EF  L+   ++   D +      V++ V  
Sbjct: 245 GGLERVFEINRNFRNEGIDATHSP-EFTMLEAYEAYGTYDTMAVLTREVVQEVAR 298



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 28/154 (18%)

Query: 419 HIAQELG--IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            I +EL   +I  +  E  ++  FP               +P T     +          
Sbjct: 367 KIVEELWEHLIGDHLREPTFVRHFP------------AETSPLTRQHRSIA--------- 405

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               ++DL   GFE+A+G        V  + F    + +   +            A + G
Sbjct: 406 GVTEKWDLYVRGFELATGYSELVDPVVQRERFQAQALLRSAGDGEAMPLDEDFLAAMEHG 465

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP GGI  G+DR++    G   +R+  LFP+++
Sbjct: 466 MPPAGGIGLGVDRLLTAFTGLG-IRDTVLFPVTR 498


>gi|242802788|ref|XP_002484043.1| lysyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218717388|gb|EED16809.1| lysyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 510

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 64/305 (20%), Positives = 113/305 (37%), Gaps = 22/305 (7%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
            V + G +   R  G  +IF DI  +    Q + N   +     +  +  + L   G   
Sbjct: 65  KVVVQGRIRTARLAGSKLIFFDIVQNEHKIQAMWNLRMSTDVAPEKFKQLYRLLRRGDAF 124

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           S + +        G++ +   ++  L       +P   +           R +    D  
Sbjct: 125 SVTGKPH--RTGRGELTVQVTELPTLLSPSLHDIPTDTKEHGVSGYP---RHVQFLADKH 179

Query: 139 -HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQ 196
               +  R+ II  +R   +   F+E +TPI+ + +    AR F+  +         L  
Sbjct: 180 TSDIMRIRSAIIQYIRQFFVERTFMEVNTPIMASEAGGATARPFVTTANEFPDKSLYLRI 239

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + + L+  GFD+ F+I P FR+E       P EF   +  M +   +D+++  EN+
Sbjct: 240 APELWLKRLVIGGFDKVFEIGPSFRNEGIDKSHNP-EFTTCEFYMVYANLEDVISITENL 298

Query: 257 LRGVFEEFSNGN------------TVSNNFLRICYDDAIR-RYGTDKPDLRNPIIMHNVT 303
             G+ E  S                 S  F RI +   I        PDL +P    +V 
Sbjct: 299 FSGLAEHVSQQKERMSSEIPTPSTNFSIPFRRIDFISGIEAAINRPLPDLSSPSAEQDVK 358

Query: 304 EHFVH 308
           + F  
Sbjct: 359 KLFKE 363



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 3/87 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG---GLYRAFQCGMPP 535
           A + +L   G E  +     +      + F    I  +      G      +A + G+PP
Sbjct: 418 AARCELFIQGREYVNAYEEENSPWEQRRKFEQQKIFNQHTNESTGVDESYLQAMEWGLPP 477

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLF 562
            GG   GIDR+VML   +K + +V  F
Sbjct: 478 TGGWGCGIDRLVMLFTDSKRIGDVLPF 504


>gi|322493405|emb|CBZ28691.1| putative lysyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 536

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 105/236 (44%), Gaps = 13/236 (5%)

Query: 33  HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITG 92
            G I+F+ IR      QV+   + +  +    +R+       G ++  +   +      G
Sbjct: 1   MGRILFITIRSGEAQLQVLRQVNESFTKA--DLRAFASTLHTGDILGATG--VPGRTAKG 56

Query: 93  QIELSAQKIEILS---VAEELPLPVFGER--EYPESIRFKYRFLDLRRDT-LHKNIVKRT 146
           ++ L A +  IL+     ++   P            I+++YRF+D+  +  + ++  KR 
Sbjct: 57  ELSLYATEASILAPYVCTDQALCPDLKGFVPLTDTGIKYRYRFVDMMSNPSVVQHFRKRH 116

Query: 147 RIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
            I  ++R  + A +F+E  TP+L + +S   A+ F+     N    + L  AP+ + +  
Sbjct: 117 AITRALRDFLDARSFVEVETPVLHSVASGANAKPFVTHHNANDADLF-LRVAPELHLKQC 175

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           +  G +R ++I   FR+ED      P EF   +   ++   +D++   E +LR + 
Sbjct: 176 VVGGMERVYEIGRVFRNEDADRSHNP-EFTTCEFYAAYHTYEDLMTMTEEILRHLA 230



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 51/141 (36%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           I     E  ++ D P +                 M    ME           + +++L  
Sbjct: 319 ITDRVVEPTFVTDHPLF-----------------MSPLAMEQRA----RPGLSARFELFI 357

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAG 542
           NG E  +     +  +     F    + ++  ++          +A Q G+PP  G   G
Sbjct: 358 NGTEYCNAYSELNDPQEQYYRFQQQLLDRQTGDDEAMALDETFLKALQVGLPPTAGWGMG 417

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR+ MLL G+  +RE  LFP
Sbjct: 418 IDRVAMLLNGSSTIREDILFP 438


>gi|134054891|emb|CAK36903.1| unnamed protein product [Aspergillus niger]
          Length = 585

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 73/338 (21%), Positives = 133/338 (39%), Gaps = 43/338 (12%)

Query: 6   THSCGD-------LGVSDV--GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPD 55
           T SC +       L  +++     V ++G V  +R  GG +IF D+       QV+ N  
Sbjct: 89  TVSCAEFRGRYSHLADNEIVEDDTVVINGRVRTLRLVGGNLIFFDLVHDGHKIQVMCNRR 148

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVA-EELPLP 113
                   + +  + +   G   S +          G++ + A ++ ++LS    ++P+ 
Sbjct: 149 RLKDIPPATFKQFYRMLRRGDAFSVTGNPHRTE--RGELTVLATELPQLLSPCLHDIPVD 206

Query: 114 VFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
             G+   P       R +  L        I  R+ ++  +R   +   F+E +TPI+ A 
Sbjct: 207 AQGQENSPYP-----RHVQFLADPETVNVIRARSAVVQYLRQFFVDRAFMEVNTPIIEAV 261

Query: 173 SPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F   +        +L  AP+ + + L+  GFDR F+I P FR+E       P
Sbjct: 262 AGGAIARPFHTTATEFPDRQLSLRIAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP 321

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN------------------ 273
            EF   +   ++   +D++ T E +L G+ E  +  +  S                    
Sbjct: 322 -EFTTCEFYHAYANLEDLMTTTEQLLSGLAEHLTAFHQSSPFKRPNQEDTPLPFSHLNFS 380

Query: 274 --FLRICYDDAIRR-YGTDKPDLRNPIIMHNVTEHFVH 308
             F R+ +  +I +  G   PDL +P  +  V   F  
Sbjct: 381 APFRRLDFITSIEQSIGQKLPDLASPDALEQVKAIFRD 418



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 3/87 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS---NVGISKEVVENRFGGLYRAFQCGMPP 535
           A + +L   G E+ +     +      + F          +  E       +A + G+PP
Sbjct: 475 AARGELFIEGREVVNTYEEENSPFEQRRKFEDQVRYSKQADEAEEIDESYLKALEWGLPP 534

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLF 562
            GG   GIDR+ ML  G   + ++  F
Sbjct: 535 TGGWGCGIDRLCMLFTGMTRIGDILPF 561


>gi|302387990|ref|YP_003823812.1| tRNA synthetase class II (D K and N) [Clostridium saccharolyticum
           WM1]
 gi|302198618|gb|ADL06189.1| tRNA synthetase class II (D K and N) [Clostridium saccharolyticum
           WM1]
          Length = 441

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 116/264 (43%), Gaps = 16/264 (6%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M + +T    +LG + +G  V++ G ++++R      F+ +R    + Q + + + + F 
Sbjct: 8   MEK-KTVEAEELG-NHIGENVQIHGSIYKIRTMSDFAFVLLRTKRNVVQCIYSAEFSGFS 65

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER-- 118
           +   +  E  + +   V +           TG  +L   KIE LS  EE    V   +  
Sbjct: 66  L-SEITEESCVIVTAHVKAEERS------KTG-YDLQMIKIETLSWPEEPSPVVINNKRV 117

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +        +R L LR +        +  I   +R  +  E F E  TP +  +  EG  
Sbjct: 118 DASMETLLNFRPLTLRNERERAIFKLQEGITCGIREFLKQERFTEVHTPKIVYAGAEGGA 177

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +    +   + ++ A  Q+PQ YKQ +M   ++R F+IAP FR E   + R   E+  +D
Sbjct: 178 NIFCLNYFGKEAYLA--QSPQFYKQ-MMVGVYERVFEIAPVFRAEKHDTSRHLNEYTSVD 234

Query: 239 MEMSFVE-QDDILNTMENVLRGVF 261
            EM +++  +DI+     +LR V 
Sbjct: 235 FEMGYIDSFEDIMQMETMMLRHVM 258



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 52/146 (35%), Gaps = 29/146 (19%)

Query: 437 IMDFPFYEWNEEE-----------------KKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + DF  +E  EE                          PF          K +     + 
Sbjct: 302 VKDFDDFEPEEERLLYELVKQKTGSEFVFVTHYPSRKRPFYA--------KDSGENQEET 353

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             +DL+  G EI +GG R H  +  +      G++       F       + GMPPHGG+
Sbjct: 354 LSFDLLFRGLEITTGGQRIHKYKEQIAKMEYRGMNA----ELFDTYLMMHKYGMPPHGGL 409

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMS 565
             G++R    LL   NVR  +LFP  
Sbjct: 410 GLGLERFTGKLLEQDNVRLSTLFPRD 435


>gi|330723807|gb|AEC46177.1| Lysyl-tRNA synthetase 1 [Mycoplasma hyorhinis MCLD]
          Length = 492

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/285 (21%), Positives = 120/285 (42%), Gaps = 15/285 (5%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + ++G +  +R      F+ I  ++   Q+  +      E  K +     L   G ++  
Sbjct: 60  INVAGRIVAMRGP----FIIINSYFDKIQLYYDKKLLQIEENKDLFE---LLDLGDIIQ- 111

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
            A+ +     T ++ L   K+++L+ A + PLP           +++ R+LDL  +   K
Sbjct: 112 -AQGVVFKTKTNELSLKVNKLQLLTKALK-PLPDKFHGINDVDEKYRKRYLDLISNPETK 169

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAP 198
                RT+II+ +R  +   N++E +TPIL +  +   AR F         +FY L  A 
Sbjct: 170 QVFFTRTKIISLIRQFLDNLNYMEVTTPILQSLLTGASARPFTTFYNSLHANFY-LRIAT 228

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L+  G DR ++I   FR+E   +   P EF  ++   ++   + ++   E + +
Sbjct: 229 ELPLKKLLVGGLDRVYEIGKIFRNEGVDTTHNP-EFTSIEFYEAYANLETMMERTEAIFK 287

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
            + ++  N       F     D  +     D  D  + I+  N+ 
Sbjct: 288 FLVDKL-NIKNKKIVFGEYEIDFNLPFNKFDLVDKTSEILGINLK 331



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 11/129 (8%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            +E   E K I       +P  +    +      D       + +L     E A+     
Sbjct: 362 LFEEFVEPKLIQPTFVYGHPIEISP--LAKKDEKDPR--FTQRAELFIAKKEFANMFNEL 417

Query: 499 HMSEVMLQAF----SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +  E  LQ F        +  E           + + GMPP GG   GIDR+VMLL    
Sbjct: 418 NDPEDQLQRFENQIKEKDLGNEEANEIDYDFVDSLKYGMPPAGGCGIGIDRLVMLLTSKT 477

Query: 555 NVREVSLFP 563
           ++REV LFP
Sbjct: 478 SIREVILFP 486


>gi|164663385|ref|XP_001732814.1| hypothetical protein MGL_0589 [Malassezia globosa CBS 7966]
 gi|159106717|gb|EDP45600.1| hypothetical protein MGL_0589 [Malassezia globosa CBS 7966]
          Length = 995

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/308 (20%), Positives = 116/308 (37%), Gaps = 54/308 (17%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVA------NPDSACFEIAKSVRSEWV 70
           G+  R    +H +R     + F+ +R  +G+T          N  S        + SE +
Sbjct: 160 GTEWRFRARIHVIRNMSSHLAFVVLR-EHGVTMQAVLSEHGTNITSHMMHWVMRLPSESL 218

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVFG-----------ER 118
           + + G +          +I    +EL    + ++S ++E++P  V+             +
Sbjct: 219 VFVQGTLQKPREVITGCDIA--HLELHLTHVHLVSGISEKMPFTVYAAERALSSHLEEHQ 276

Query: 119 EYPES------------------------------IRFKYRFLDLRRDTLHKNIVKRTRI 148
           +  E                                R   R +DLR  T+   ++  + I
Sbjct: 277 DLDEDESLDHSSSVLSDADRQSQRSTSHVPVITQRTRLSNRLVDLRTPTMQAVVMIPSVI 336

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
               R  +    FIE  TP L   + E        +   + +F A  Q+PQ YKQ+ +A+
Sbjct: 337 CREFRQYLSQHEFIEIHTPKLQGGASESGASVFDVAYFGRSAFLA--QSPQLYKQMCIAA 394

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
              R F+I P FR E+  + R   E+  LD+EM      D ++ ++ +L+ +F    +  
Sbjct: 395 DMRRVFEIGPVFRAENSNTARHLTEYTGLDLEMEINHYYDAMSLIDRMLKHIFTVLRDKY 454

Query: 269 TVSNNFLR 276
                F+R
Sbjct: 455 GHVTQFIR 462



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 7/98 (7%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
              +D+   G EI +GG R H ++++    S + +    +E+        F+ G PPH G
Sbjct: 552 TNSFDIFLRGQEICTGGQRIHHAQMLEDNISRLHMDASSLED----YLEGFRLGAPPHAG 607

Query: 539 IAAGIDRIVMLLLGAKNVREVSLF---PMSQNFCDLLM 573
              G++R+VML L   ++R  SLF   P S        
Sbjct: 608 CGLGLERLVMLYLNLDDIRLASLFYRDPKSFPTKPPQT 645


>gi|322500960|emb|CBZ36036.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 536

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/236 (22%), Positives = 105/236 (44%), Gaps = 13/236 (5%)

Query: 33  HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITG 92
            GGI+F+ IR      QV+   + +  +    +R+       G ++  +   +      G
Sbjct: 1   MGGILFITIRSGEAQLQVLRQVNESFTKA--DLRAFASTLHTGDILGATG--VPGRTAKG 56

Query: 93  QIELSAQKIEILS---VAEELPLPVFGER--EYPESIRFKYRFLDLRR-DTLHKNIVKRT 146
           ++ L A +  IL+     ++   P            I+++YRF+D+    ++ ++  KR 
Sbjct: 57  ELSLYATEASILAPYVCTDQALCPDLKGFVPLTDTGIKYRYRFVDMMSSPSVVQHFRKRH 116

Query: 147 RIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
            I  ++R  + A +F+E  TP+L + +S   A+ F+     N    + L  AP+ + +  
Sbjct: 117 AITRALRDFLDARSFVEVETPVLHSVASGANAKPFVTHHNANDADLF-LRVAPELHLKQC 175

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           +  G +R ++I   FR+ED      P EF   +   ++    D++   E +LR + 
Sbjct: 176 VVGGMERVYEIGRVFRNEDADRSHNP-EFTTCEFYAAYHTYKDLMTMTEEILRHLA 230



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 51/141 (36%), Gaps = 25/141 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           I     E  ++ D P +                 M    ME           + +++L  
Sbjct: 319 ITDRVVEPTFVTDHPLF-----------------MSPLAMEQR----TRPGLSARFELFI 357

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAG 542
           NG E  +     +  +     F    + ++  ++          +A Q G+PP  G   G
Sbjct: 358 NGTEYCNAYSELNDPQEQYYRFQQQLLDRQTGDDEAMALDETFLKALQVGLPPTAGWGMG 417

Query: 543 IDRIVMLLLGAKNVREVSLFP 563
           IDR+ MLL G+  +RE  LFP
Sbjct: 418 IDRVAMLLNGSSTIREDILFP 438


>gi|12044988|ref|NP_072798.1| lysyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|255660156|ref|ZP_05405565.1| lysyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351162|sp|P47382|SYK_MYCGE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|3844726|gb|AAC71353.1| lysyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078779|gb|ABY79397.1| lysyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 490

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 105/250 (42%), Gaps = 15/250 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V L+G +  +R      FL I+D  G  Q+  N         K           G  + 
Sbjct: 58  TVSLAGRIIAIRQ----TFLIIQDFDGQVQLYINKKIHP----KLFDYFNEFVDIGDQIV 109

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TL 138
            S + +        + L+ ++++I++    L  P           R + RFLDL  +  +
Sbjct: 110 VSGKPMLTKTKV--LTLAVEEMKIIAKCL-LVPPEKWHGLTDIETRARKRFLDLTYNLAM 166

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQA 197
               +KRT+II S+R  +    FIE  TP L A      A+ F       +  FY L  A
Sbjct: 167 RDVFLKRTKIIKSIRSFLDQNGFIEVETPTLQAVLGGANAKPFKTHYNALKADFY-LRIA 225

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            +   + L+  GF++ +++   FR+E   +   P EF  +++  ++ + + +L  +E ++
Sbjct: 226 NEIALKKLIIGGFNKVYEMGKMFRNEGVDTTHNP-EFTSIEIYQAYADFEVMLVLVEKLI 284

Query: 258 RGVFEEFSNG 267
           + + E  +  
Sbjct: 285 QSLCESLNQF 294



 Score = 84.0 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 48/127 (37%), Gaps = 7/127 (5%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHM 500
           F+E   E+  I+      T     +  L   D  + +   +++L  NG EIA+     + 
Sbjct: 360 FFEQFCEQTLIEPTF--VTHYPKAVSPLAKQDPSNPEFTQRFELFINGKEIANAYSELND 417

Query: 501 SEVM----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                    Q      +  +           A   GM    G+  GIDR+VMLL    ++
Sbjct: 418 PLEQRKRFEQQLEEKQLGNDETSELDESFLEALSFGMVNTAGLGIGIDRLVMLLCECNSI 477

Query: 557 REVSLFP 563
           R+V  FP
Sbjct: 478 RDVVFFP 484


>gi|328716488|ref|XP_003245957.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like isoform 2
           [Acyrthosiphon pisum]
          Length = 520

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/321 (18%), Positives = 123/321 (38%), Gaps = 26/321 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDI-RDHYGITQVVANPDSACFEIAK---SVRS 67
           +  +     V + G +H     G   F+ + +  + I  +    D+   +  K   ++  
Sbjct: 70  IKTNLADKSVWIRGRLHTSYARGKQCFMIVRQQQWSIQVLAVVSDTISKQFVKFCSNITK 129

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--------EELPLPVFGERE 119
           E V+ I G V    ++  + +     +EL  +++ ++S +        E+   PV G+ +
Sbjct: 130 ESVVDIKGKVARTPSKIGSCSQK--DVELYIEELWVVSQSADQLPLLLEDAYRPVNGDDK 187

Query: 120 Y-----PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                     +   R +DLR             +    R  + A+ F+E   P +  +  
Sbjct: 188 DADIRANLDTKLDNRAIDLRTPANQAIFRLEAVVCKFFREILTAKGFVEIFPPRIKNAVT 247

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
               +    S     ++ A  Q P  +  + +A  F+R F I P FR ED  S R   EF
Sbjct: 248 GNGTNVFKISYFKGSAYLA--QCPTFHNIIAIAGDFERVFTIGPVFRPEDSNSHRHLTEF 305

Query: 235 YQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP-- 291
             L++EM+F     ++++ + ++   +F+         +    IC   ++  +    P  
Sbjct: 306 TNLNLEMTFKHHYHEVVDVIASLFTSIFKGL--RENYQSEIKTICEQYSVEPFKFLDPPL 363

Query: 292 DLRNPIIMHNVTEHFVHSEFR 312
            L  P+ ++ + E+ V     
Sbjct: 364 KLEFPMAVNMLRENGVEMGDE 384



 Score =  107 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 5/113 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F +     E++   D   + +  YD+   G E+ +GG R H    +++   +  +     
Sbjct: 413 FPLAIRSFETMPDPD-SKVGSNSYDMFMRGEEVLTGGQRIHDYHYLMKRAKHCQVDI--- 468

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             +F     AF+ G PP  G   G++R+VML LG  N+R  S+FP        
Sbjct: 469 -EKFAYYLDAFRYGCPPLAGGGIGLERVVMLYLGLDNIRIASMFPRDSKRLTP 520


>gi|254575085|pdb|3I7F|A Chain A, Aspartyl Trna Synthetase From Entamoeba Histolytica
 gi|254575086|pdb|3I7F|B Chain B, Aspartyl Trna Synthetase From Entamoeba Histolytica
          Length = 548

 Score =  149 bits (376), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 81/428 (18%), Positives = 149/428 (34%), Gaps = 93/428 (21%)

Query: 1   MHR----YRT----HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVV 51
           MH+    Y+T        +L  +     V +   V  VR  G ++FL +R   Y    +V
Sbjct: 37  MHQSQPCYKTGLKYTEIEELVPAMAEKTVTIRARVQAVRGKGNMVFLFLRKGIYTCQALV 96

Query: 52  ANPDSACFEIAK---SVRSEWVLCIDGLVMSRSAETINANIITGQI-------------- 94
              ++   E  +    + +E +  I G+V +       A     +I              
Sbjct: 97  MKSETISKEFVQFCQKISAESICDITGIVKAVEKPIEKATQQDVEIHVTSIAVVSLAEYP 156

Query: 95  ------------ELSAQKIEILSVAEELPLPVFGERE----------------------- 119
                        +  ++ E ++  +E       + E                       
Sbjct: 157 LPMQIEDLTFPSSVFKKQEEDIAKVDEKIAKFLKDNEGKDLTKRPLKDEYAKLLKEKASA 216

Query: 120 -----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                  +  R   R LDLR  T       ++      R  + ++ F+E  TP L   S 
Sbjct: 217 QKYVKVSQDTRLDNRMLDLRTVTNIAIFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSS 276

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EG  +       ++ ++ A  Q+PQ YKQ+ +   F + F++ P FR E+  + R   EF
Sbjct: 277 EGGSNIFEVKYFDRKAYLA--QSPQLYKQMAIMGDFRKVFEVGPVFRAENSNTRRHLTEF 334

Query: 235 YQLDMEMSFVE-QDDILNTMENVLRGVFEEFSNG---------------NTVSNNFLRIC 278
             LD+EM  VE   + ++ ME +   +F+E                   + +   FLR+ 
Sbjct: 335 EGLDIEMEIVENYHECIDVMEKLFTFIFDEIPKRFPDELKVIRKQYPFEDLIYRPFLRLT 394

Query: 279 YDDAIRRYG------TDKPDLRNP--IIMHNVTEHFVHSEFRVFSK-ILSVNPGYEVWAI 329
           Y +AI           D  D   P  + +  + +   +++F +  K   ++ P Y +  I
Sbjct: 395 YKEAIEMLRASGETIGDYDDFTTPQEVKLGELIKAKYNTDFYILDKFPAAIRPFYTMPDI 454

Query: 330 PAKGGGGN 337
                  +
Sbjct: 455 DDPNYSNS 462



 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 12/116 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF             D     +  YD+   G EI SG  R H  E +++    
Sbjct: 440 KFPAAIRPFYTMPDID------DPN--YSNSYDVFVRGQEITSGAQRIHDPEFLMKRCIE 491

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+    +++       +F+ G  PH G   G++RI ML LG  N+R+V+LFP   
Sbjct: 492 KGVDPATLKD----YIESFRFGSWPHAGCGIGLERITMLYLGIPNIRKVTLFPRDP 543


>gi|118399659|ref|XP_001032154.1| asparaginyl-tRNA synthetase family protein [Tetrahymena
           thermophila]
 gi|89286492|gb|EAR84491.1| asparaginyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 618

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 71/402 (17%), Positives = 125/402 (31%), Gaps = 86/402 (21%)

Query: 17  VGSFVRLSGWVHRVRPH-------------GGIIFLDIRDHY---GITQVVANPDSACFE 60
           +G    ++GW    R +               + F+++ D     GI  VV++     ++
Sbjct: 137 IGKVGTVAGWARTTRANSNQVQILLNRAAGKDLFFIELNDGTCQKGIQIVVSSGTIENYD 196

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV---AEELPLPVFGE 117
               + +   + + GL +     +    +  G  E    K+EIL     A     P+  +
Sbjct: 197 TVVKINTATSVKVTGLFVKPEGGSEKVEVKIGSAE---HKVEILGAIDPALSKTYPMAKK 253

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               E +R +   L  R + +      R  +  +      +  F    TP++TAS  EGA
Sbjct: 254 FHTVEKLR-EIAHLRPRSNLIGCVARIRNNLAYATHIYFQSNGFQYIHTPLITASDCEGA 312

Query: 178 RDFLVPSRVNQG-----------------------SFYALP---QAPQQYKQLLMASGFD 211
            +    +                             F+  P       Q           
Sbjct: 313 GEMFQVTTTLPKPEESLLKVKDKVLDKEGRIDYSKDFFKKPAFLTVSGQLSVENYCCALS 372

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
             +   P FR E   + R   EF+ ++ E++F +  D+++  E  ++   E     N   
Sbjct: 373 NVYTFGPTFRAEVSHTTRHLAEFWMIEPELAFADVHDVMDCAEGYVKFCLEYVLTNNKSD 432

Query: 272 NNFL----------------------RICYDDAIRRYGTDKPD---LRNPIIMHN--VTE 304
             FL                      R+ Y DAI        +     N +       TE
Sbjct: 433 LEFLQNALKKPELVEYLKGLISGPFARLSYTDAITLLQKAVANGKVFENKVEWGEELATE 492

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           H       VF K ++V               G +AF  R+NE
Sbjct: 493 HERFLAEVVFKKPVAVYNY----------PKGFKAFYMRLNE 524



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 5/86 (5%)

Query: 481 QYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
            +D++     E+  G  R    +V+ +     G++               + G  PHGG 
Sbjct: 531 AFDMLAPQVGELIGGSQREERLDVLEKRMIESGLNPADYW----WYLDLRRYGTVPHGGF 586

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMS 565
             G +R+ ML  G  NVR+V  FP +
Sbjct: 587 GLGFERLCMLCSGVDNVRDVIPFPRT 612


>gi|195998728|ref|XP_002109232.1| hypothetical protein TRIADDRAFT_53048 [Trichoplax adhaerens]
 gi|190587356|gb|EDV27398.1| hypothetical protein TRIADDRAFT_53048 [Trichoplax adhaerens]
          Length = 490

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 98/280 (35%), Gaps = 27/280 (9%)

Query: 4   YRTHSCGDLGVSDVG---SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           Y T +  ++ + ++      + + GWV   R    +IFL++ D    +++     ++   
Sbjct: 32  YVTCTIKEIMLGEIARKRERITIKGWVRLCRSQKNVIFLNVSDGSCASKLQVVLPASA-- 89

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                         G  +    E + ++      EL A  I +L    +   P    R Y
Sbjct: 90  -------CTKPPTIGSSVEACGELVESSHKGQLYELQADTITVLGDMLDSNFPFVPGRRY 142

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
                 K+  L  R +     +  R++    +        +    +PI+T+S  EGA D 
Sbjct: 143 SLEYLRKFPHLRARTNVFQALLRIRSQACMQLHKYFQDYYYTFIHSPIITSSDCEGAGDL 202

Query: 181 LVPSRVNQ-----------GSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
              +  N+             F+  P       Q     + S     +   P FR E   
Sbjct: 203 FTVTPKNKENTDRTDDQRINDFFNSPSFLTVSGQLHAEALMSSLSHVYTFGPAFRAEKSH 262

Query: 227 SDRLPGEFYQLDMEMSFVEQDDIL-NTMENVLRGVFEEFS 265
           +     EFY ++ E +  +  +IL ++ E+ ++   ++  
Sbjct: 263 TRHHLAEFYMIEAESTRFDNMEILISSTEHFVKETIKKLL 302



 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 54/146 (36%), Gaps = 24/146 (16%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           +I  +  +  +I DFP                PF   +         D  ++ AF + LV
Sbjct: 369 LIQMSGNKGLFITDFP------------AKLRPFYCRKND-------DDKTVAAFDF-LV 408

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
               E+  G +R    +++L       IS    +  +       + G   HGG   G +R
Sbjct: 409 PTIGELIGGSLREERFDLLLNNMKTFNIS----QESYSWYIDLRRYGTIRHGGFGMGFER 464

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDL 571
            +  +LG  N+R+V  FP     C L
Sbjct: 465 FLQFILGLANIRDVMPFPRYSGSCKL 490


>gi|219120825|ref|XP_002185644.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209582493|gb|ACI65114.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 579

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 74/372 (19%), Positives = 131/372 (35%), Gaps = 46/372 (12%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVVAN-------PDSACFEIAK 63
           L  S  G  V + G +   R  G   F+ +R   Y +  V            SA  +   
Sbjct: 108 LKPSLAGESVLVRGHLQTARAVGKGAFVLVRSSLYSVQGVAFESKDDDGAVSSAMIKYMA 167

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV--------- 114
            + +E V+ + G+V        +A      +E+  +    ++ A++              
Sbjct: 168 GLPAESVVDMRGIVTVPDQPVDSATQKM--VEIKIESFHCVAKAKKALPFQMEDACRPDS 225

Query: 115 --------------------FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRC 154
                                G     + +R  YR++DLR           + +    R 
Sbjct: 226 GKETDIGAYNEDDPEVVDSEDGLIHIGQKMRLDYRWIDLRTPANQSIFRIESMVGCLFRE 285

Query: 155 RMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA-SGFDRY 213
            ++   F+E  TP L   + EG  D        Q +  A+  +PQ +KQ+  A SGF+R 
Sbjct: 286 FLLQRGFVEIHTPKLIGGASEGGSDVFTLDYFGQSACLAM--SPQLHKQMTAACSGFERV 343

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVSN 272
           F+  P FR E+  + R   EF  LD+EM   E  D +L  M  +   +F+  +       
Sbjct: 344 FETGPVFRAENSNTRRHLCEFTGLDLEMVIHEHYDEVLAVMSELFIYIFDGVNERCKPEL 403

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
             +R  +     +Y +    L        + E  +  +     + LS     ++  I  +
Sbjct: 404 ERVREQHPFEDLQYLSPTLKLTFAEGCALLREAGIDQDNY---EDLSTENEKKLGDIVKQ 460

Query: 333 GGGGNRAFCDRM 344
             G +  F D+ 
Sbjct: 461 KYGTDFFFLDKF 472



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 64/158 (40%), Gaps = 24/158 (15%)

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGND 473
           D      ++LG I    +      DF F +      K   A  PF TMP      L    
Sbjct: 445 DLSTENEKKLGDIVKQKYG----TDFFFLD------KFPLAVRPFYTMPDPNDPKL---- 490

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                +  YD    G EI SG  R H  +++ +    +GI  E + +       +F+ G 
Sbjct: 491 -----SNSYDFFIRGQEIVSGAQRVHDPDLIEERAKALGIDVESIAD----YVESFRHGA 541

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            PHGG   G++R+VML LG  N+R+ + FP        
Sbjct: 542 LPHGGGGIGLERVVMLFLGLPNIRKAAWFPRDPKRISP 579


>gi|261338209|ref|ZP_05966093.1| lysine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270276855|gb|EFA22709.1| lysine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 574

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/274 (20%), Positives = 111/274 (40%), Gaps = 23/274 (8%)

Query: 6   THSCGDLGVSDVGS---------FVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANP 54
           T +  D+     G           V ++G V  +R  GG+ F+ +   D   I  +++  
Sbjct: 113 TDTIEDVRKKYDGKLEAGQETDDIVGVAGRVLFIRNAGGLCFVQLSAGDGTKIQGMLSKK 172

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           +      A S++    L   G  +      I +   TG++ + A +  I + A +    +
Sbjct: 173 ELG----ADSLKRFKQLVDLGDHLYLKGRVIASK--TGELSIFATEWAIAAKALQPLPAL 226

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TAS 172
              +E  E  R +  ++ +  D   +N+V+ R++ ++S+R       F+E  TP+L T  
Sbjct: 227 --HKELNEDTRTRKPYIGMIADENIRNMVRNRSKAVSSLRHTFEEHGFLEVETPMLQTIH 284

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               AR F           Y +  AP+ + +  +  G DR F+I   FR+E   +   P 
Sbjct: 285 GGAAARPFTTHMNAFDLDLY-MRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAP- 342

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           EF  ++   ++   D I    + +++    +   
Sbjct: 343 EFTMVEAYEAYGNYDTIAKLTKELIQKTAMDVFG 376



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 57/169 (33%), Gaps = 34/169 (20%)

Query: 407 LKFCSFAADARNHIAQELGIIN--------CNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
            KF       R+ +     ++            +E  ++ DFP      E   +   H  
Sbjct: 421 AKFADKLGVERDEVENRGKLVEHLWEHFYEDKLYEPTFVRDFPV-----ETSPLVKGHR- 474

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
                                 ++DL   GFE+A+G    +   V  + F     +    
Sbjct: 475 ---------------TKPGVVEKWDLYVRGFELATGYSELNDPIVQRERFVEQAKAALAG 519

Query: 519 ENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +            A   GMPP GG+  GIDR+++ L GA  +RE   FP
Sbjct: 520 DEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETITFP 567


>gi|317026036|ref|XP_001388795.2| lysyl-tRNA synthetase [Aspergillus niger CBS 513.88]
          Length = 568

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 73/338 (21%), Positives = 133/338 (39%), Gaps = 43/338 (12%)

Query: 6   THSCGD-------LGVSDV--GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPD 55
           T SC +       L  +++     V ++G V  +R  GG +IF D+       QV+ N  
Sbjct: 72  TVSCAEFRGRYSHLADNEIVEDDTVVINGRVRTLRLVGGNLIFFDLVHDGHKIQVMCNRR 131

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVA-EELPLP 113
                   + +  + +   G   S +          G++ + A ++ ++LS    ++P+ 
Sbjct: 132 RLKDIPPATFKQFYRMLRRGDAFSVTGNPHRTE--RGELTVLATELPQLLSPCLHDIPVD 189

Query: 114 VFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
             G+   P       R +  L        I  R+ ++  +R   +   F+E +TPI+ A 
Sbjct: 190 AQGQENSPYP-----RHVQFLADPETVNVIRARSAVVQYLRQFFVDRAFMEVNTPIIEAV 244

Query: 173 SPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +    AR F   +        +L  AP+ + + L+  GFDR F+I P FR+E       P
Sbjct: 245 AGGAIARPFHTTATEFPDRQLSLRIAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP 304

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN------------------ 273
            EF   +   ++   +D++ T E +L G+ E  +  +  S                    
Sbjct: 305 -EFTTCEFYHAYANLEDLMTTTEQLLSGLAEHLTAFHQSSPFKRPNQEDTPLPFSHLNFS 363

Query: 274 --FLRICYDDAIRR-YGTDKPDLRNPIIMHNVTEHFVH 308
             F R+ +  +I +  G   PDL +P  +  V   F  
Sbjct: 364 APFRRLDFITSIEQSIGQKLPDLASPDALEQVKAIFRD 401



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 3/87 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS---NVGISKEVVENRFGGLYRAFQCGMPP 535
           A + +L   G E+ +     +      + F          +  E       +A + G+PP
Sbjct: 458 AARGELFIEGREVVNTYEEENSPFEQRRKFEDQVRYSKQADEAEEIDESYLKALEWGLPP 517

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLF 562
            GG   GIDR+ ML  G   + ++  F
Sbjct: 518 TGGWGCGIDRLCMLFTGMTRIGDILPF 544


>gi|325283207|ref|YP_004255748.1| Aspartate--tRNA ligase [Deinococcus proteolyticus MRP]
 gi|324315016|gb|ADY26131.1| Aspartate--tRNA ligase [Deinococcus proteolyticus MRP]
          Length = 441

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 17/260 (6%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            +  G  VRL G +   R  GG+ F+ +RD  G   V    D    ++      E  + I
Sbjct: 22  AALSGQPVRLRGQILSRRDLGGLQFVTLRDGSG--AVQCVGDGLGLDLP---LPESSVEI 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRFLD 132
            G V              G++E+  Q + +L+ A E  P+ +             +R + 
Sbjct: 77  LGTVAPHPKRA-------GEVEVRMQAMHLLAAAAEPTPVELPKLSRVHPDTLLNHRAVT 129

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R       +  +  ++   R  +    F E STP +  +  EG  +        + ++ 
Sbjct: 130 VRGLEARAVLRVQAELLAGFRAALGDMGFTEISTPKIVEAGAEGGANLFTVDYFGEPAYL 189

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILN 251
           A  Q+PQ YKQ +M   F+R F++AP FR E   + R   E+  LD E+ F++ ++D+++
Sbjct: 190 A--QSPQLYKQ-MMVGAFERVFEVAPVFRGEQHNTSRHLTEYLSLDAELGFIDSEEDVMD 246

Query: 252 TMENVLRGVFEEFSNGNTVS 271
               VLR +    +      
Sbjct: 247 VETEVLRVMLARVAERCGPE 266



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 33/161 (20%)

Query: 412 FAAD-ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
              +  R  +  +          F ++  FP             A   +T P G ++ + 
Sbjct: 313 LLGEYVRRELGSD----------FVFVTQFP-----------QAARPFYTHPAGEVDGVP 351

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
                      +DL+  G EI SGG R H  +++ Q+    G++     +   G    F+
Sbjct: 352 VT-------RGFDLLLRGLEITSGGQRIHDPQMLAQSIEAYGLNP----DSLRGYSEVFR 400

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            GMPPHGG A G +R+  LLLG  NVR    FP  +     
Sbjct: 401 YGMPPHGGFAIGAERLTALLLGIGNVRMARAFPRDRTRLQP 441


>gi|170290813|ref|YP_001737629.1| aspartyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174893|gb|ACB07946.1| aspartyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 419

 Score =  149 bits (375), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 69/296 (23%), Positives = 128/296 (43%), Gaps = 19/296 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP---DSACFEIAKSVRSEWVLCIDGLVM 78
           R+ GWV  VR  G + F+ IR+     Q+       + + F++ +++  E V+ + G   
Sbjct: 2   RVHGWVSEVRNLGKVRFIVIRNWNERIQITLKRGMVEDSLFDLTENLTQESVIEVVG--- 58

Query: 79  SRSAETINANIITG-QIELSAQKIEILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRD 136
               + +   I  G   E+  ++I + S+A    PL    +       RF  R LDLRR 
Sbjct: 59  ----KEVKEKIAVGADREVIPERIIVHSLANPQLPLDPNWKVPAQVPTRFDNRPLDLRRP 114

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
            +       + +++ M   +    FI   TP L  ++ E   +       ++ ++  L Q
Sbjct: 115 EIQAIFKIESSLLDGMEDWLRRNGFIRVFTPALIGAASESGAEVFKVLYFDKEAY--LRQ 172

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMEN 255
            PQ ++QL +  GF+R + +   +R E  R+ R   EF  L +E++F+E + D +   E 
Sbjct: 173 DPQLHRQLTILGGFERIYDLGTNWRAELSRTPRHLSEFRSLAVELAFIENEQDTMRVEEQ 232

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
           ++R   +      +     L +  D     +    P+LR P I   + E+    E+
Sbjct: 233 IIREGIKRVVEERSKELELLNVDLDVPKVPF----PELRFPKIYEILEEYGKIIEY 284



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 14/119 (11%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
            +  F   PF + +               A   DL+  G E++SGG R H  +V++    
Sbjct: 312 NRFPFKVKPFYVMKEDD----------TWARSVDLLYKGLELSSGGQREHRYDVLISQIR 361

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             G+    +E       + F  G PPHGG A GI+R++M +L   +V+E SLFP   + 
Sbjct: 362 EKGLDPRSLE----WFTKFFAYGAPPHGGFAIGIERLLMKMLELSSVKEASLFPRDPDR 416


>gi|229822645|ref|YP_002884171.1| tRNA synthetase class II (D K and N) [Beutenbergia cavernae DSM
           12333]
 gi|229568558|gb|ACQ82409.1| tRNA synthetase class II (D K and N) [Beutenbergia cavernae DSM
           12333]
          Length = 437

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 65/263 (24%), Positives = 103/263 (39%), Gaps = 17/263 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT    +L  +  G  V L G VHR R    + FL +RD  G+ QVV  PD         
Sbjct: 10  RT-LAAELAAASPGGVVTLRGHVHRRRELARVTFLVVRDRSGLAQVVIRPDDGV------ 62

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGEREYPE 122
                V   +  V      T NA    G +E++   I  LS   A         + +   
Sbjct: 63  ---PAVPPEETPVEVTGVATANAQ-APGGVEITTPTITALSDAAATPPVELWRPKLDASL 118

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            +  +   +  R   +          +   R  + A  F E  +P L A++ E   +   
Sbjct: 119 PVLLENAAVAWRHPVMRARWEIAAASLKGFRSYLDARAFTEVRSPKLVATATESGANVFG 178

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                + ++ A  Q+PQ YKQ L    F+R +++ P FR E   + R   E+  LD+E+ 
Sbjct: 179 VDYFGRPAYLA--QSPQFYKQQL-VGVFERVYEVGPVFRAEPHDTVRHLAEYTSLDVELG 235

Query: 243 FVEQD-DILNTMENVLRGVFEEF 264
           F+E   D+L  +   L  + +  
Sbjct: 236 FIEGHRDVLAVLRGALASMVDAV 258



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 32/155 (20%)

Query: 412 FAAD-ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
              + AR+ +  ++            +  +P        +K  F  +P+T  +       
Sbjct: 308 ALGEWARDELGSDV----------LAVEGYPM-------RKRPFYTHPWTGAE------- 343

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
                   +  +DL+  G E+ +GG R H     L A    G         +     AF+
Sbjct: 344 ---PGGPWSNSFDLIFRGVELVTGGQRLHRHADYLTAIRARGEEPSE----YRHYLSAFE 396

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            GMPPHGG A G++R V  L+GA NVREV+LFP  
Sbjct: 397 HGMPPHGGFAIGLERWVSRLVGAANVREVTLFPRD 431


>gi|330920517|ref|XP_003299039.1| hypothetical protein PTT_09950 [Pyrenophora teres f. teres 0-1]
 gi|311327454|gb|EFQ92872.1| hypothetical protein PTT_09950 [Pyrenophora teres f. teres 0-1]
          Length = 551

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 66/292 (22%), Positives = 120/292 (41%), Gaps = 33/292 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH-YGITQVVANPDSACFEIAK---SVRSE 68
            S+    +    WV   R     + FL++R +   I  VVA  D    ++ K   ++ +E
Sbjct: 86  ASNEDKEITFRCWVENARVQSAKLAFLNLRQNLSTIQAVVAASDKLSKQMVKFCGNISTE 145

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE------ 122
             L + G+V        +A+I     E+  QK+ + + AE        + E P       
Sbjct: 146 STLVVTGIVKRVKEPIKSASIT--DFEIHIQKLFVEASAEIPLPLQVSDAERPLPSDAVV 203

Query: 123 -----------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
                            + R   R +DLR        V ++ +    +  +  + F+   
Sbjct: 204 EEDEKVEEGAERPLVSLNTRLNNRTIDLRAKINQAIFVIKSGVCALFQEFLSKKGFVLVH 263

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP +  ++ EG  +        + ++ A  Q+PQ YKQ+L+AS F +  +I P FR E+ 
Sbjct: 264 TPKILGAASEGGANVFELKYFGRPAYLA--QSPQFYKQMLIASRFQKVMEIGPVFRAENS 321

Query: 226 RSDRLPGEFYQLDMEMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            + R   EF  LD+EM F E   +++  +E+++  +F E +         +R
Sbjct: 322 NTARHLTEFTGLDLEMEFQENYHEVMGVLEDLMLFIFNELNTRYKKETELVR 373



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 51/149 (34%), Gaps = 22/149 (14%)

Query: 422 QELGIINCNCFEFCWIM--DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           + LG +    +   +     FP                 +TMP     +L         +
Sbjct: 420 KMLGRLVLEKYNTDFYTLDQFPL-----------AIRPAYTMPSPADPAL---------S 459

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             YD+   G EI SG  R H S ++           +            F+ G PPH G 
Sbjct: 460 NSYDMFMRGQEICSGAQRIHDSALLADQMRKHDPPIDPAGAGTKDYVDCFKYGCPPHAGG 519

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             G++RIV   LG  N+R  SLFP     
Sbjct: 520 GFGLERIVQFWLGLPNIRMCSLFPRDPQR 548


>gi|67467598|ref|XP_649894.1| aspartyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56466418|gb|EAL44507.1| aspartyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 544

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 81/428 (18%), Positives = 149/428 (34%), Gaps = 93/428 (21%)

Query: 1   MHR----YRT----HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH-YGITQVV 51
           MH+    Y+T        +L  +     V +   V  VR  G ++FL +R   Y    +V
Sbjct: 33  MHQSQPCYKTGLKYTEIEELVPAMAEKTVTIRARVQAVRGKGNMVFLFLRKGIYTCQALV 92

Query: 52  ANPDSACFEIAK---SVRSEWVLCIDGLVMSRSAETINANIITGQI-------------- 94
              ++   E  +    + +E +  I G+V +       A     +I              
Sbjct: 93  MKSETISKEFVQFCQKISAESICDITGIVKAVEKPIEKATQQDVEIHVTSIAVVSLAEYP 152

Query: 95  ------------ELSAQKIEILSVAEELPLPVFGERE----------------------- 119
                        +  ++ E ++  +E       + E                       
Sbjct: 153 LPMQIEDLTFPSSVFKKQEEDIAKVDEKIAKFLKDNEGKDLTKRPLKDEYAKLLKEKASA 212

Query: 120 -----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                  +  R   R LDLR  T       ++      R  + ++ F+E  TP L   S 
Sbjct: 213 QKYVKVSQDTRLDNRMLDLRTVTNIAIFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSS 272

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EG  +       ++ ++ A  Q+PQ YKQ+ +   F + F++ P FR E+  + R   EF
Sbjct: 273 EGGSNIFEVKYFDRKAYLA--QSPQLYKQMAIMGDFRKVFEVGPVFRAENSNTRRHLTEF 330

Query: 235 YQLDMEMSFVE-QDDILNTMENVLRGVFEEFSNG---------------NTVSNNFLRIC 278
             LD+EM  VE   + ++ ME +   +F+E                   + +   FLR+ 
Sbjct: 331 EGLDIEMEIVENYHECIDVMEKLFTFIFDEIPKRFPDELKVIRKQYPFEDLIYRPFLRLT 390

Query: 279 YDDAIRRYG------TDKPDLRNP--IIMHNVTEHFVHSEFRVFSK-ILSVNPGYEVWAI 329
           Y +AI           D  D   P  + +  + +   +++F +  K   ++ P Y +  I
Sbjct: 391 YKEAIEMLRASGETIGDYDDFTTPQEVKLGELIKAKYNTDFYILDKFPAAIRPFYTMPDI 450

Query: 330 PAKGGGGN 337
                  +
Sbjct: 451 DDPNYSNS 458



 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 12/116 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF             D     +  YD+   G EI SG  R H  E +++    
Sbjct: 436 KFPAAIRPFYTMPDID------DPN--YSNSYDVFVRGQEITSGAQRIHDPEFLMKRCIE 487

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+    +++       +F+ G  PH G   G++RI ML LG  N+R+V+LFP   
Sbjct: 488 KGVDPATLKD----YIESFRFGSWPHAGCGIGLERITMLYLGIPNIRKVTLFPRDP 539


>gi|302821725|ref|XP_002992524.1| hypothetical protein SELMODRAFT_448794 [Selaginella moellendorffii]
 gi|300139726|gb|EFJ06462.1| hypothetical protein SELMODRAFT_448794 [Selaginella moellendorffii]
          Length = 487

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 94/586 (16%), Positives = 170/586 (29%), Gaps = 154/586 (26%)

Query: 10  GDLGVSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
            + G  + G      V ++G V   R           D               F     V
Sbjct: 32  DEFGQLEAGQRSNTLVSVAGKVMHKRLE--------PDSTCYVLESVVGKLPAFVDHARV 83

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY----- 120
                    G ++  S      +   G++ +S +K+ +L+          G+        
Sbjct: 84  PKLGAEIERGDIVGVSGFASACH---GELGISVEKLCLLAPCLRTLPEREGDSHTEQESW 140

Query: 121 --------------PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECS 165
                          +  R++ R LDL  +   K++   RT  +N +R  M      E +
Sbjct: 141 RPGKARDPSAYVLSDQEERYRNRVLDLIVNPDIKSVFAARTEAVNYIRTYMETSGVTEVN 200

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           T +L   S                    L  +  Q  Q L+ S F   ++I   FR+E+ 
Sbjct: 201 TGVLEQRSVANG---FKTHHNQLNLDMVLRVSSDQLLQ-LIVSNFFGVYEIGKQFRNEEM 256

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
                P EF   +M  ++ +  D++   E +L G+  + + G                  
Sbjct: 257 SRTHNP-EFTTCEMYKAYADYKDLMEMTEKLLSGLVMKITGGYK--------------VY 301

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
           Y +D  D  +P ++ + T          F ++  V    E   +       +    + + 
Sbjct: 302 YHSDGYD--SPPVVIDFT--------PPFRRVEVVKGLEEALGLKFPEDLASEQANEFLR 351

Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD 405
           E   S+G                                                     
Sbjct: 352 ETCSSKG------------------------------------------------VACPP 363

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
           PL   +  +    H       +        +I+D+P        K+      PF      
Sbjct: 364 PLSTANLLSSLAGHF------LEATSVSPTFIVDYP--------KRST----PFAKTHSS 405

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
              L         A  + L  +  ++ SG  +        +      +            
Sbjct: 406 TPLL---------AEHFKLFVSKSQLVSGFTQCRDPAEAQENSELHTL------------ 444

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
               + G+PP  G A GIDR+VMLL  + +++EV L+P  +   DL
Sbjct: 445 ---LEYGLPPCSGWACGIDRLVMLLTDSVDIKEVVLYPALKPAEDL 487


>gi|46107986|ref|XP_381051.1| hypothetical protein FG00875.1 [Gibberella zeae PH-1]
          Length = 581

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 65/318 (20%), Positives = 124/318 (38%), Gaps = 30/318 (9%)

Query: 21  VRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEI----AKSVRSEWVLCIDG 75
           + + G +   R  G  +IF+DI + +   QV+ N      +      K      ++ +  
Sbjct: 59  ITVYGRIRSKRVVGKNLIFIDIVNEFTRLQVMVNRSKCMVDQEDRRLKFGMFRSLIEVGD 118

Query: 76  LVMSRS---AETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + + S      I      G++ + A+ + E+LS      +    E+      R + R +
Sbjct: 119 HIYAYSLAAITGIPTRTKAGELTIEAKALPELLS----PTMEQIPEKLTDPKTRMQERHV 174

Query: 132 D-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQG 189
           D L        +  R  I   MR    ++ F+E  TPIL  ++    AR F+  +   + 
Sbjct: 175 DMLVNREAIDVLRLRAEITKYMRDYFHSKRFLEFQTPILAQNAGGAVARPFVTRATEFKD 234

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
              AL  AP+ + + L+  G D+ F+I P FR+E   +   P EF   +   ++   +D+
Sbjct: 235 KDLALRIAPELWLKRLVIGGVDKVFEIGPSFRNEGVDATHNP-EFTMCEFYSAYTNLEDL 293

Query: 250 LNTMENVLRGVFEE-------------FSNGNTVSNNFLRICYDDAIRR-YGTDKPDLRN 295
           +   E +L G+ +                + +     F R+ +  A++   G   P L +
Sbjct: 294 IKETEEILCGLAQHSQELISTELTALPPIDMSRFVRPFKRVEFVPALQEALGLRLPKLSS 353

Query: 296 PIIMHNVTEHFVHSEFRV 313
           P  +  V      S   +
Sbjct: 354 PDALPEVLAILKLSGIEI 371



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 50/154 (32%), Gaps = 34/154 (22%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           + E     + +   ++P  M      S    + L + + + +L   G E+A+     +  
Sbjct: 390 YLEPMSFTEPVLIMNHPACMSPLAK-SFVCPETLQLVSARAELFIGGRELANMYEEENDP 448

Query: 502 EVMLQAFSNVG----------------------ISKEVVENRFGG-----------LYRA 528
           E   +                            + ++  +  F               +A
Sbjct: 449 EAQRRKLFEHRHLVNRDDGGIDIEIPKPPEGQDVIQDPQDEPFEDKDGDAAPLDQSFVKA 508

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              G+PP GG   GI+R+VML  GA  + +   F
Sbjct: 509 LDYGLPPTGGWGCGIERMVMLFSGASRISDCLSF 542


>gi|293364076|ref|ZP_06610812.1| asparagine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552566|gb|EFF41340.1| asparagine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 451

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 111/261 (42%), Gaps = 16/261 (6%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           L GWV   R +  + F+++ D   +   Q+V    +  FE+   ++    + + G +++ 
Sbjct: 22  LEGWVDSNRGNNKLRFINLNDGSTVKSLQIVIKGTNFDFELLDQIKIGASIKVTGKIVAT 81

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                        IEL A +I++L   +         +E       +   +  R  TL  
Sbjct: 82  PGSKQP-------IELVASQIQLLKNTDNDYPIQ--NQEINVETLREIPHIRHRTKTLKS 132

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ---- 196
            ++ R+ +   +    IA ++   ++PI+T++  EGA +    S  ++  F+ L +    
Sbjct: 133 AMLIRSVLAQEIHKYFIAHDYFLMASPIITSNDGEGAGETFNVSDDSKEPFFGLNKKATL 192

Query: 197 -APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
               Q      A GF + +  AP FR E   + +   EF+ ++ E++F + +D++N  ++
Sbjct: 193 GVTGQLHAESYAIGFKKVYTFAPTFRAEHSNTKKHAAEFWMVEPEIAFYKLNDVVNLADH 252

Query: 256 VLRGVFEEFSNGNTVSNNFLR 276
           +L+ V            +FL 
Sbjct: 253 MLKTVIRNTLAKCKFEFDFLE 273



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 77/266 (28%), Gaps = 41/266 (15%)

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMG 373
           F K+ +  P +       K         +    + +      LA    +      +A   
Sbjct: 207 FKKVYTFAPTFRAEHSNTKKHAAEFWMVEPEIAFYKLNDVVNLADHMLKTVIRNTLAKCK 266

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ---ELGI---- 426
                L       +R RLD+   +    I  D  +        ++       E G+    
Sbjct: 267 FEFDFLEENVDSELRARLDLFINNKLSII--DYTQAIKELQKVKDIFENQDIEFGLDLAT 324

Query: 427 -----INCNCFE-FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
                I    F     +++FP             A   F M Q                 
Sbjct: 325 EHERYIAEKLFNGPVAVINFP------------KAFKAFYMHQNDDNKTVA--------- 363

Query: 481 QYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
            +DL+  G  E+  G  R    E +L+    + I     +          + G     G 
Sbjct: 364 AFDLLVPGIGELIGGSQREVRYEKLLERVKELKID----QEDLQWYLDLRRFGDSGSSGF 419

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMS 565
             G +R+VM + G  N+R+V  +P +
Sbjct: 420 GLGFERLVMYVTGLDNIRDVIPYPRT 445


>gi|70989089|ref|XP_749394.1| aspartyl-tRNA synthetase Dps1 [Aspergillus fumigatus Af293]
 gi|66847025|gb|EAL87356.1| aspartyl-tRNA synthetase Dps1, putative [Aspergillus fumigatus
           Af293]
 gi|159128809|gb|EDP53923.1| aspartyl-tRNA synthetase Dps1, putative [Aspergillus fumigatus
           A1163]
          Length = 555

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/298 (20%), Positives = 112/298 (37%), Gaps = 30/298 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFEIAK---SV 65
           +LG       V +   V   R     + FL + +    +  V+A  +    ++ K    +
Sbjct: 87  ELGEDHYEKQVTVVARVDNARVQSAKLAFLMLRQQGKKVQAVIAAAEPISRQMVKYTGGL 146

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--- 122
               ++ + G+V   +    +A +    +E+  QK+ ++S A ++      + E P    
Sbjct: 147 NVNSIVQVTGIVKKPAIPISSATLS--DLEIHIQKVYMISEAAQMLPMQVKDAERPPPET 204

Query: 123 -----------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
                              R   R LDL+ +T        + +       MI        
Sbjct: 205 TEEGNLVDAEGAPIVTLKTRLDNRVLDLQTETSQAITWISSGVAELFAEYMIKSGSRWIF 264

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP L  ++ EG  +        + ++ A  Q+PQ YKQ+ +A   +  F+IAP FR ED 
Sbjct: 265 TPKLVGAATEGGSNVFEVKYFKRNAYLA--QSPQLYKQMCIAGDMESVFEIAPVFRAEDS 322

Query: 226 RSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
            + R   EF  LD E +F     ++L   EN+L  +  +           ++  Y  A
Sbjct: 323 NTHRHLTEFAGLDFEKTFRSHYHEVLEFAENLLVFILSQLKERYKDQIAIIQKSYPKA 380



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 92/239 (38%), Gaps = 35/239 (14%)

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIV-----NTEAIRVRLD 392
           R+    + E+A +     L +I  +L E      +  + K            +   +RL+
Sbjct: 341 RSHYHEVLEFAENL----LVFILSQLKERYK-DQIAIIQKSYPKAGDFKLPKDGKALRLN 395

Query: 393 MQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-FPFYEWNEEE 449
             DG +    AG D  +   F  D    + ++LG I  + ++  + ++D FP        
Sbjct: 396 YMDGVALLKEAGVDVSEQERFENDLTTAMEKQLGQIIRDKYDTDFYVLDKFPM------- 448

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                A  PF             D     +  YD    G EI SG  R +  + + ++  
Sbjct: 449 -----AVRPFYTKAC------PQDPR--FSNSYDFFMRGEEIMSGAQRINDIKELEESMI 495

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             G+  +  +  F     AF+ G PPH G   G++RIVM  LG  NVR  SLFP     
Sbjct: 496 AKGLDPK--QEGFEDYLAAFRQGCPPHAGGGLGLNRIVMFFLGLPNVRLASLFPRDPQR 552


>gi|15618840|ref|NP_225126.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|16752102|ref|NP_445469.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33242296|ref|NP_877237.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|11387161|sp|Q9Z6X5|SYK_CHLPN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|4377254|gb|AAD19069.1| Lysyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189844|gb|AAF38715.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33236807|gb|AAP98894.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 527

 Score =  148 bits (374), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 61/328 (18%), Positives = 122/328 (37%), Gaps = 42/328 (12%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-------------IAKSVR 66
            VR +G +   R  G   F  I DH    QV+ N +                  I K + 
Sbjct: 66  RVRFAGRLVLFRAMGKNAFGQILDHNQTIQVMFNREFTSVHGLSEDAEITPIKFIEKKLD 125

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +L IDG +             +G++ +  + + +L  +  L LP        + +R+
Sbjct: 126 LGDILGIDGYLFFT---------HSGELTVLVETVTLLCKSL-LSLPDKHAGLSDKEVRY 175

Query: 127 KYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL     +    VKR+ II  +R  M A  F+E  TPIL        A+ F    
Sbjct: 176 RKRWLDLISSREVSDTFVKRSYIIKLIRNYMDAHGFLEVETPILQNIYGGAEAKPFTTTM 235

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                  + L  + +   + ++  G  R +++   FR+E       P EF  ++   +++
Sbjct: 236 EALHSEMF-LRISLEIALKKILVGGAPRIYELGKVFRNEGIDRTHNP-EFTMIEAYAAYM 293

Query: 245 EQDDILNTMENVLRGVFEEFSNGN---------------TVSNNFLRICYDDAIRRYGTD 289
           +  +++  +EN++  +    ++ N                    ++R+   ++I  Y   
Sbjct: 294 DYKEVMVFVENLVEHLVRAVNHDNTSLVYSYWKHGPQEVDFKAPWIRMTMKESIATYAGI 353

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
             D+ +   +  + +         F+  
Sbjct: 354 DVDVHSDQKLKEILKKKTTFPETAFATA 381



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 10/124 (8%)

Query: 452 IDFAHNPFTMPQGGME---SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS----EVM 504
           +   H+    P        +L+  D   +   +++  C G E+ +     +      E++
Sbjct: 399 LIAPHHITDHPVETTPLCKTLRSGDTAFV--ERFESFCLGKELCNAYSELNDPIRQRELL 456

Query: 505 LQAFSNVGISKE-VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            Q  +   +  +            A   GMPP GG   G+DR+VM+L  A ++R+V  FP
Sbjct: 457 EQQHTKKELLPDSECHPIDEEFLEALCQGMPPAGGFGIGVDRLVMILTNAASIRDVLYFP 516

Query: 564 MSQN 567
           + + 
Sbjct: 517 VMRR 520


>gi|160936241|ref|ZP_02083614.1| hypothetical protein CLOBOL_01137 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441051|gb|EDP18775.1| hypothetical protein CLOBOL_01137 [Clostridium bolteae ATCC
           BAA-613]
          Length = 443

 Score =  148 bits (374), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 111/270 (41%), Gaps = 14/270 (5%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L     G  +R++G VH +R  G + F+ +R   G+ Q V       F+I + ++ E  +
Sbjct: 19  LEGEYEGKEIRMNGAVHTIRHMGEVAFVILRKSRGLVQCVYEAGITDFDI-RELKEESAV 77

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--VFGEREYPESIRFKYR 129
            + G+V +               E+  ++I +LS   E         +       +   R
Sbjct: 78  EVMGVVKAEER-------APQGFEIRLKEIRVLSRPAEPLPLAVSKWKLNTSLETKLSLR 130

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            + LR          +  I+   R  +++ +F E  TP + A   EG  +       N+ 
Sbjct: 131 PISLRNVRERAKFKIQEGIVRGFRDYLLSRDFTEIRTPKIVARGAEGGSNVFKLEYFNKK 190

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDD 248
           +   L Q+PQ YKQ  M   +DR F+ AP FR E   + R   E+  LD EM +++   D
Sbjct: 191 AE--LGQSPQFYKQ-TMVGVYDRVFEAAPVFRAEKHNTTRHLNEYTSLDFEMGYIDSFRD 247

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
           +++    +L+ V +          + L + 
Sbjct: 248 VMDMETGMLQYVMKLLEQDYKKELDMLGVT 277



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 56/139 (40%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF             D     +  +DL+  G E+ 
Sbjct: 329 DFVFVTHYP------------SKKRPFYAMDD------PADPRFTLS--FDLLFRGLEVT 368

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H    +       G+  E + +        F+ GMPPHGG+  G++R+ M LL 
Sbjct: 369 TGGQRIHDYREITAKMEKRGMDPEDIAS----YLMIFKYGMPPHGGLGIGLERLTMRLLD 424

Query: 553 AKNVREVSLFPMSQNFCDL 571
            +NVRE SLFP      + 
Sbjct: 425 EQNVREASLFPRDVTRLEP 443


>gi|212540142|ref|XP_002150226.1| lysyl-tRNA synthetase, putative [Penicillium marneffei ATCC 18224]
 gi|210067525|gb|EEA21617.1| lysyl-tRNA synthetase, putative [Penicillium marneffei ATCC 18224]
          Length = 521

 Score =  148 bits (374), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 61/301 (20%), Positives = 114/301 (37%), Gaps = 22/301 (7%)

Query: 24  SGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
            G +   R  G  +IF D+  +    Q + N   +     +  +  + L   G  +S + 
Sbjct: 80  QGRIRTARLAGSKLIFFDLVQNDHKIQGMWNLRMSADVTPEKFKVIYRLLRRGDALSITG 139

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLHKN 141
           +        G++ +   +I IL       +P   +           R +  L        
Sbjct: 140 KPH--RTGRGELTIKVTEIPILLSPSLHDIPTDTKEHGISGYP---RHVQFLADKRTSDI 194

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQ 200
           +  R+ II  +R   +   F+E +TPI+ + +    AR F+  +         L  AP+ 
Sbjct: 195 MRIRSAIIQYIRQFFVERAFMEVNTPIMASEAGGATARPFVTTANEFPDKSLYLRIAPEL 254

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           + + L+  GFD+ F+I   FR+E       P EF   +  M++   +D+++  E++  G+
Sbjct: 255 WLKRLVIGGFDKVFEIGASFRNEGIDKSHNP-EFTTCEFYMAYANLEDVMSMTESLFSGL 313

Query: 261 FEEFSNGN------------TVSNNFLRICYDDAIRR-YGTDKPDLRNPIIMHNVTEHFV 307
            E  +                 S  F RI +   I +      PDL +P    +V + F 
Sbjct: 314 AEHVTQHKERMNSEIPTPNTNFSAPFRRIDFIPGIEQAINRPLPDLSSPTAEEDVKQLFA 373

Query: 308 H 308
            
Sbjct: 374 D 374



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 3/87 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG---GLYRAFQCGMPP 535
           A + +L   G E  +     +      Q F    I  +      G      +A + G+PP
Sbjct: 429 AARCELFIEGREYVNAYEEENSPWEQRQKFEQQKIFNQHTNESTGVDESYLQAMEWGLPP 488

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLF 562
            GG   GIDR+VML   +K + +V  F
Sbjct: 489 TGGWGCGIDRLVMLFTDSKRIGDVLPF 515


>gi|310793039|gb|EFQ28500.1| asparaginyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 583

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 61/345 (17%), Positives = 116/345 (33%), Gaps = 27/345 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V+++G +HR+R      F+ + D YG +  V+   D      A +      L + G 
Sbjct: 153 GDRVKIAGRIHRLRAQKQATFITLVDGYGHLQCVLQAGDLTKTYDALTFAQGTSLWVYGE 212

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----REYPESIRFKYRFLD 132
           +          +      EL     +++  +      +  +    +   +S     R L 
Sbjct: 213 LKKVPEGQTAPDNR----ELHVDYYKVIGTSPTDEDAITNKVSLLQNQWDSQMLDNRHLV 268

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR D     +  R  +  +           + S P L  +  EG          ++ ++ 
Sbjct: 269 LRGDNASAIMKIRAAVEWAFCKTYKDLKITKVSPPALVQTQVEGGATLFSVPYYDEAAY- 327

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y + ++ S     + I   FR E   + R   E+  ++ E+ F+E  D+L  
Sbjct: 328 -LTQSSQLYLETVLPS-LGSVYCIEKSFRAERSLTRRHLAEYTHVEAELDFIEFPDLLEH 385

Query: 253 MENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRY-GTDKPDLRNPI 297
           +E V+  V +                 +       F+R+ Y DAI      D P L    
Sbjct: 386 LEEVMCRVIDNVLADEEIAAFIKELNPDFKKPVRPFMRMKYTDAIDWLNAQDPPILNEDG 445

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
             H   +    +  R  +  ++       +    K     +   D
Sbjct: 446 EPHKFGDDIAEAAERKMTDAINKPIFLTHFPTEIKAFYMKKDPND 490



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 6/126 (4%)

Query: 446 NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML 505
           +   K I   H P T  +        ND    ++    L+    EI  G +R    E ++
Sbjct: 464 DAINKPIFLTHFP-TEIKAFYMKKDPNDPRVTESVDC-LMPGVGEIVGGSMRMEGYEELM 521

Query: 506 QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            A+   GI  +     +       + G  PHGG   G++R +  L     VR   L+P  
Sbjct: 522 AAYDREGIPSKD----YYWYTDQRKYGTSPHGGYGLGLERFLAWLANQHTVRTTCLYPRY 577

Query: 566 QNFCDL 571
              C  
Sbjct: 578 MGRCKP 583


>gi|171682808|ref|XP_001906347.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941363|emb|CAP67013.1| unnamed protein product [Podospora anserina S mat+]
          Length = 914

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 67/363 (18%), Positives = 129/363 (35%), Gaps = 28/363 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRP-HGGIIFLDIRDH-YGITQVVANPDSACFE----IAKSVR 66
              + G  +     +H  R     + F+  R+    I  VVA  +    E     A+ + 
Sbjct: 109 NPDNAGKQIEFIARIHHTRSLSSKLAFIVFREQIETIQGVVAYKEGHITENFVRWAEHLM 168

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL---PVFGEREYPES 123
           +E  + + G +     E    +I    +E+  + + ++   +E            E  E 
Sbjct: 169 TESHVHVKGTLQRPPEEVKGCSIH--DLEVLVESMHLVVPVKEHLPVDVFSIDLVEMDEE 226

Query: 124 -----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                      +R   R   LR  T        + I +  R  +    FIE  TP L  +
Sbjct: 227 SHQLESLASTRVRVANRLAYLRTPTAQSIFRINSGICSIFRSVLEGHGFIEIHTPKLMPA 286

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + E   +    +   + +F A  Q+PQ  KQL +++ F R F+I P FR ED  + R   
Sbjct: 287 ATESGAEVFKVNYFGRTAFLA--QSPQLSKQLSISADFGRVFEIGPVFRAEDSNTHRHLT 344

Query: 233 EFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           E+  LD+EM+   +  + LN ++++++ +F+            ++  +      +    P
Sbjct: 345 EYTGLDLEMAINSDYHEALNIIDDMMKSIFKGIYTRFRREIEIIKTRFPHEDLVWLEKTP 404

Query: 292 DLRNPIIMHNVTE---HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
                  +  + E      H +     + LS      +  +  K    +    D+     
Sbjct: 405 VFTFKEAIALLNESGWTDDHGKPASELEDLSTRAEIRLGEVIKKKYNTDYYIIDKFPASV 464

Query: 349 RSQ 351
           R  
Sbjct: 465 RPF 467



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 61/166 (36%), Gaps = 24/166 (14%)

Query: 404 GDPLKFCSFAADARNHIAQELGIINCNCFEF-CWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
            D  K  S   D        LG +    +    +I+D           K   +  PF   
Sbjct: 422 DDHGKPASELEDLSTRAEIRLGEVIKKKYNTDYYIID-----------KFPASVRPFYTH 470

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
                     D        +D+   G EI +GG R H  +V+++     GI    ++   
Sbjct: 471 PDE------EDPR--FTNSFDIFLRGQEITTGGQRIHKPDVLVERMKKAGIEPFGMQE-- 520

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
               + F+ G+ PH G   G++RI+ L+L   ++R  SLFP     
Sbjct: 521 --YLQGFEYGVLPHAGCGIGLERIIFLMLSLGDIRNASLFPRDPKS 564


>gi|328865342|gb|EGG13728.1| asparagine-tRNA ligase [Dictyostelium fasciculatum]
          Length = 648

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/280 (20%), Positives = 105/280 (37%), Gaps = 20/280 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V + GW+H  R    + F+ +RD  G  Q V   D     +   +  E  + + G +
Sbjct: 224 GQRVHIKGWLHEARIQKSVGFIKLRDGTGFLQCVLTGDLVHPSLHDVLIREATVSLYGTL 283

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                           +EL     +++  +  + L      E      F  R + LR   
Sbjct: 284 TVPPPG----KKAPQDVELQVDYWQLIGESN-VDLEGIINTESHVDQMFDQRHIVLRGTR 338

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
               +  R+  + + R       + E + P L  +  EG  +         GS   L Q+
Sbjct: 339 ASAIMKMRSLAMKAFRDHFYDNGYFEVTPPTLVNTFCEGGSELFTLDFF--GSPAYLTQS 396

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            Q Y + ++    D  F IA  +R E  ++ R   EF  +++E  F++ DD+L+ +E ++
Sbjct: 397 SQLYLETMIPVVGD-AFCIAQSYRAEASKTRRHLAEFTHIEVESPFIKFDDLLDRIEFLV 455

Query: 258 RGVFEEFS------------NGNTVSNNFLRICYDDAIRR 285
             V E               N       F+R+ Y++ I+ 
Sbjct: 456 CDVAERLFKLDKDLLLTVNPNAKIPERPFMRMNYEEGIKF 495



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 5/90 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G +R    + ++ A+   G+      +++       + G  PHGG   
Sbjct: 563 DLLMPGVGEIVGGSMRIANYQQLMDAYKKEGLDP----SQYYWFTDQRKYGTCPHGGYGL 618

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R +   LG +++R V L+P  ++ C  
Sbjct: 619 GFERFLTWFLGEEHIRNVCLYPRMRDRCSP 648


>gi|119715425|ref|YP_922390.1| aspartyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|119536086|gb|ABL80703.1| aspartyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 424

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 72/270 (26%), Positives = 106/270 (39%), Gaps = 22/270 (8%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MH  RT  C DL  +  GS VRL GWVHR R    + FL +RD  G+ QVV         
Sbjct: 1   MH--RT-LCSDLPAATPGSTVRLQGWVHRRRELSALTFLVVRDRSGLAQVVVR------- 50

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV--AEELPLPVFGER 118
                    V   +  V      T NA    G +EL+   +  L+   A           
Sbjct: 51  -----DGSAVPPEETTVEVVGTATANAQ-APGGMELTDPVVTALTEPAATPPVELWRPGL 104

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +        +  +  R              +   R  + A  F E  TP   AS+ E   
Sbjct: 105 DVVLPTLLDHAPVTWRHPRQRARWELAAASVRGFRATLDAAGFTEVQTPKFVASATESGA 164

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           +        + ++ A  Q+PQ YKQ L    F+R +++ P FR E   + R   E+  LD
Sbjct: 165 NVFEVDYFGRPAYLA--QSPQFYKQQL-VGVFERVYEVGPVFRAEPHDTVRHLAEYVSLD 221

Query: 239 MEMSFV-EQDDILNTMENVLRGVFEEFSNG 267
           +E+ FV +  D+L+ + +VL G+       
Sbjct: 222 VELGFVRDHRDVLSVLRDVLAGMVAAVHEH 251



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/116 (32%), Positives = 50/116 (43%), Gaps = 14/116 (12%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
               A  PF T P  G E           +  +DL+  G E+ +GG R H       A  
Sbjct: 316 GYPMAKRPFYTHPWPGEERW---------SNSFDLLFRGLELVTGGQRLHRPSEYDAAIR 366

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             G         +    +AF+ GMPPHGG A G++R    L G  N+REV+LFP  
Sbjct: 367 ARGEDPAA----YAPYLQAFEHGMPPHGGFAIGLERWTARLTGVANIREVTLFPRD 418


>gi|119498141|ref|XP_001265828.1| aspartyl-tRNA synthetase Dps1, putative [Neosartorya fischeri NRRL
           181]
 gi|119413992|gb|EAW23931.1| aspartyl-tRNA synthetase Dps1, putative [Neosartorya fischeri NRRL
           181]
          Length = 555

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 60/298 (20%), Positives = 112/298 (37%), Gaps = 30/298 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFEIAK---SV 65
           +LG       V +   V   R     + FL + +    +  V+A  +    ++ K    +
Sbjct: 87  ELGEDHYEKEVTVVARVDNARVQSAKLAFLMLRQQGKKVQAVIAAAEPISRQMVKYTGGL 146

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--- 122
               ++ + G+V   +    +A +    +E+  QK+ ++S A ++      + E P    
Sbjct: 147 NVNSIVQVTGIVKKPAIPISSATLSN--LEIHIQKVYMISEAAQMLPMQVKDAERPPPET 204

Query: 123 -----------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
                              R   R LDL+ +T        + +       MI        
Sbjct: 205 TEEGNLVDAEGAPIVTLKTRLDNRVLDLQTETSQAITWISSGVAELFAEYMIKSGSRWIF 264

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP L  ++ EG  +        + ++ A  Q+PQ YKQ+ +A   +  F+IAP FR E+ 
Sbjct: 265 TPKLVGAATEGGSNVFEVKYFKRNAYLA--QSPQLYKQMCIAGDMESVFEIAPVFRAEES 322

Query: 226 RSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
            + R   EF  LD E +F     ++L   E++L  +  +           ++  Y  A
Sbjct: 323 NTHRHLTEFAGLDFEKTFRSHYHEVLEFAEDLLVFILSQLKERYKDQIAIIQKSYPKA 380



 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 91/239 (38%), Gaps = 35/239 (14%)

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIV-----NTEAIRVRLD 392
           R+    + E+A       L +I  +L E      +  + K            +   +RL+
Sbjct: 341 RSHYHEVLEFAEDL----LVFILSQLKERYK-DQIAIIQKSYPKAGDFKLPKDGKALRLN 395

Query: 393 MQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-FPFYEWNEEE 449
             DG +    AG D  +   F  D    + ++LG I  + ++  + ++D FP        
Sbjct: 396 YMDGVALLKDAGVDVSEQERFENDLTTAMEKQLGQIIRDKYDTDFYVLDKFPM------- 448

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
                A  PF             D     +  YD    G EI SG  R +  + + ++  
Sbjct: 449 -----AVRPFYTKAC------PQDPR--FSNSYDFFMRGEEIMSGAQRINDIKELEESMI 495

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             G+  +  +  F     AF+ G PPH G   G++RIVM  LG  NVR  SLFP     
Sbjct: 496 AKGLDPK--QEGFEDYLAAFRQGCPPHAGGGLGLNRIVMFFLGLPNVRLASLFPRDPQR 552


>gi|154341393|ref|XP_001566648.1| lysyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134063973|emb|CAM40163.1| putative lysyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 536

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 61/328 (18%), Positives = 127/328 (38%), Gaps = 24/328 (7%)

Query: 33  HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITG 92
            G I+F+ IR      QV+     +  +    +R+       G ++  +   +      G
Sbjct: 1   MGRILFITIRSGEAQLQVLRQVSESFTKT--DLRAFADALHTGDILGATG--VPGRTAKG 56

Query: 93  QIELSAQKIEILS---VAEELPLPVF--GEREYPESIRFKYRFLDLRRDT-LHKNIVKRT 146
           ++ L A +  IL+     ++   P            I+++YRF+D+  +  + ++  KR 
Sbjct: 57  ELSLYATEASILAPYVCTDQALCPDLRGFVPLTDTDIKYRYRFVDMMSNPSVLQHFRKRH 116

Query: 147 RIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
            I  ++R  + A +FIE  TP+L + +S   AR F+     N G+   L  AP+ + +  
Sbjct: 117 AITRALRDYLDARSFIEVETPVLHSVASGASARPFITHHNAN-GADLFLRVAPELHLKQC 175

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           +  G +R ++I   FR+ED      P EF   +   ++   +D++   E ++R +    +
Sbjct: 176 VVGGMERVYEIGRVFRNEDADRSHNP-EFTTCEFYAAYHTYEDLMVMTEEIMRHLALAAN 234

Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV------TEHFVHSEFRVFSKILS 319
               V      +    A      D       +  ++        E    +E      +  
Sbjct: 235 GTTKVV-----VTSCVAKEPVEIDFEQPFRRVSAYDAVQEAAGVELPPPTELNTPRGLAY 289

Query: 320 VNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
           ++     + IP           D++ ++
Sbjct: 290 MSAIMLRYNIPLPSVRTAAKMFDKLIDY 317



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 8/114 (7%)

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
              +P  M    ME           + +++L  NG E  +     +  +     F    +
Sbjct: 329 VTGHPLFMSPLAMEQRA----RPGLSARFELFINGIEYCNAYSELNDPQEQYYRFQQQLL 384

Query: 514 SKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            ++  ++          +A Q G+PP  G   GIDR+V LL G+ ++R+  LFP
Sbjct: 385 DRQTGDDEAMALDETFLKALQAGLPPTAGWGMGIDRVVTLLNGSASIRDGILFP 438


>gi|148271740|ref|YP_001221301.1| aspartyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147829670|emb|CAN00586.1| aspartyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 436

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 11/268 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT    +L   D G  V +SGWV  VR    I F+ +RD  G  Q+           A +
Sbjct: 4   RT-LIKNLAALDDGD-VAVSGWVETVRDQKKIQFVILRDESGAVQLTYKRQGDEDATADT 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +     L     + +      +  +  G +E+    IE+   A           +     
Sbjct: 62  ISG---LAAGTFLTATGTLKHDERVKLGGLEIGLSGIEVAGAAIPETPIAA---DSSIDK 115

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  +RF+DLR          +T +++++R   +  +FIE  +P L A+  E   +     
Sbjct: 116 RLDWRFIDLRAPRNSLIFRVQTTLVHALRTYWVEHDFIEVFSPKLMATPSESNAELFKVD 175

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             +  ++ A  Q+PQ +KQ+  ++GF + F++ P FR +   + R   EF  +D E+S++
Sbjct: 176 YFDGVAYLA--QSPQFFKQMAQSAGFGKMFEVGPAFRADPSFTSRHATEFTSVDAEISWI 233

Query: 245 E-QDDILNTMENVLRGVFEEFSNGNTVS 271
           E  +D+    E ++          +   
Sbjct: 234 ESHEDVARLQEELIVAALTAVKEKHGDE 261



 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 24/130 (18%)

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
             EF ++ D+P                PF   +         D        YDL+ NG E
Sbjct: 320 GHEFVFLTDYP------------STIRPFYHMRN------TEDPS--ITNSYDLIWNGVE 359

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I +G  R H  +V+       G+         G     F+ G+PPHGG   G++R++MLL
Sbjct: 360 ITTGAQREHRVDVLEAQAREKGLDP----EELGSYLDFFRYGVPPHGGFGMGLNRVLMLL 415

Query: 551 LGAKNVREVS 560
           L   N+REV+
Sbjct: 416 LHQSNLREVT 425


>gi|71893765|ref|YP_279211.1| asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|123734333|sp|Q4A9S1|SYN_MYCHJ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|71851892|gb|AAZ44500.1| asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 449

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 96/262 (36%), Gaps = 12/262 (4%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVLCIDGL 76
             V + GW+  +R +  IIF+++ D      +      +   F+  +++     + I G+
Sbjct: 18  KKVLIQGWITNIRGNLKIIFVELNDGSSFKNLQCVLKKEFIDFDKIENLALGVAVEISGI 77

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
             +               E+  + +EI         P+   +E    +  +      R  
Sbjct: 78  FSNTPERQQFG-------EVLVETLEIKGNNYNTNFPIQ-NQEISLEVLRQMPHFRHRSR 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R+ +   +      + FI  S PILT++  EGA +  +    N+  F     
Sbjct: 130 LFRVIMKLRSALFFEIHKFFRRQGFINFSAPILTSNDGEGAGEVFIVDDENKDFFNKKTT 189

Query: 197 --APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
                Q      A GF + +  AP FR E   + R   EF+ ++ E++F   + I+    
Sbjct: 190 LGVTGQLHAEAYALGFKKVYTFAPTFRAERSNTRRHAAEFWMIEPEVAFFTLEQIIELAV 249

Query: 255 NVLRGVFEEFSNGNTVSNNFLR 276
            +L+ V +     N     FL 
Sbjct: 250 KLLQKVIKSVIIRNKDEFIFLE 271



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 481 QYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
            +DL+  G  E+  G  R    E +L   S + ++       F       + G P   G 
Sbjct: 362 AFDLLVPGIGELIGGSQREVRYEKLLARMSELNMNI----EEFQWYLDLRKYGNPGSSGF 417

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             G +R++M + G +N+R+V  FP +  
Sbjct: 418 GLGFERLLMYITGIENIRDVIPFPRTSK 445


>gi|90409171|ref|ZP_01217286.1| Lysyl-tRNA synthetase class II [Psychromonas sp. CNPT3]
 gi|90309716|gb|EAS37886.1| Lysyl-tRNA synthetase class II [Psychromonas sp. CNPT3]
          Length = 253

 Score =  148 bits (373), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 51/213 (23%), Positives = 87/213 (40%), Gaps = 11/213 (5%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y   +  +L    V   V ++G +   R  G   F  I+D  G  QV    D+   + 
Sbjct: 50  EKYDDKTKEELDELAVD--VSIAGRMMTRRIMGKASFATIQDMGGRIQVYVVRDNLAVDF 107

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             +   +W L   G ++            T ++ +   +I IL+ A   PLP        
Sbjct: 108 YNTEFKKWDL---GDIIGAQGRLF--KTKTNELSIKVSEIRILTKALR-PLPDKFHGLTD 161

Query: 122 ESIRFKYRFLDLRRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
              R++ R+LDL  +    +  + R +I+NS+R  +   +F+E  TP+L A      A+ 
Sbjct: 162 IESRYRQRYLDLIANDNSRRTFILRNKIVNSIRQYLNDRDFMEVETPMLQAIPGGATAKP 221

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
           F           Y L  AP+   + L+  GF+R
Sbjct: 222 FETFHNALDLPMY-LRIAPELNLKRLVVGGFER 253


>gi|54020192|ref|YP_115926.1| asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|59798498|sp|Q600N9|SYN_MYCH2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|53987365|gb|AAV27566.1| asparagine--tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 449

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 96/262 (36%), Gaps = 12/262 (4%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVLCIDGL 76
             V + GW+  +R +  IIF+++ D      +      +   F+  +++     + I G+
Sbjct: 18  KKVLIQGWITNIRGNLKIIFVELNDGSSFKNLQCVLKKEFIDFDKIENLALGVAVEISGI 77

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
             +               E+  + +EI         P+   +E    +  +      R  
Sbjct: 78  FSNTPERQQFG-------EVLVETLEIKGNNYNTNFPIQ-NQEISLEVLRQMPHFRHRSR 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R+ +   +      + FI  S PILT++  EGA +  +    N+  F     
Sbjct: 130 LFRVIMKLRSALFFEIHKFFRRQGFINFSAPILTSNDGEGAGEVFIVDDENKDFFNKKTT 189

Query: 197 --APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
                Q      A GF + +  AP FR E   + R   EF+ ++ E++F   + I+    
Sbjct: 190 LGVTGQLHAEAYALGFKKVYTFAPTFRAERSNTRRHAAEFWMIEPEVAFFTLEQIIELAV 249

Query: 255 NVLRGVFEEFSNGNTVSNNFLR 276
            +L+ V +     N     FL 
Sbjct: 250 KLLQKVIKSVIIRNKDEFIFLE 271



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 481 QYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
            +DL+  G  E+  G  R    E +L   + + ++       F       + G P   G 
Sbjct: 362 AFDLLVPGIGELIGGSQREVRYEKLLARMNELNMNI----EEFQWYLDLRKYGNPGSSGF 417

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             G +R++M + G +N+R+V  FP +  
Sbjct: 418 GLGFERLLMYITGIENIRDVIPFPRTNK 445


>gi|312601373|gb|ADQ90628.1| Asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 449

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 96/262 (36%), Gaps = 12/262 (4%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACFEIAKSVRSEWVLCIDGL 76
             V + GW+  +R +  IIF+++ D      +      +   F+  +++     + I G+
Sbjct: 18  KKVLIQGWITNIRGNLKIIFVELNDGSSFKNLQCVLKKEFIDFDKIENLALGVAVEISGI 77

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
             +               E+  + +EI         P+   +E    +  +      R  
Sbjct: 78  FSNTPERQQFG-------EVLVETLEIKGNNYNTNFPIQ-NQEISLEVLRQMPHFRHRSR 129

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R+ +   +      + FI  S PILT++  EGA +  +    N+  F     
Sbjct: 130 LFRVIMKLRSALFFEIHKFFRRQGFINFSAPILTSNDGEGAGEVFIVDDENKDFFNKKTT 189

Query: 197 --APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
                Q      A GF + +  AP FR E   + R   EF+ ++ E++F   + I+    
Sbjct: 190 LGVTGQLHAEAYALGFKKVYTFAPTFRAERSNTRRHAAEFWMIEPEVAFFTLEQIIELAV 249

Query: 255 NVLRGVFEEFSNGNTVSNNFLR 276
            +L+ V +     N     FL 
Sbjct: 250 KLLQKVIKSVIIRNKDEFIFLE 271



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 481 QYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
            +DL+  G  E+  G  R    E +L   + + ++       F       + G P   G 
Sbjct: 362 AFDLLVPGIGELIGGSQREVRYEKLLTRMNELNMNI----EEFQWYLDLRKYGNPGSSGF 417

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             G +R++M + G +N+R+V  FP +  
Sbjct: 418 GLGFERLLMYITGIENIRDVIPFPRTNK 445


>gi|161833768|ref|YP_001597964.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri GWSS]
 gi|152206258|gb|ABS30568.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri GWSS]
          Length = 460

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 57/292 (19%), Positives = 100/292 (34%), Gaps = 25/292 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             + + GWV   R +    F+ I D   I   Q+  +  +  +     +     L + G+
Sbjct: 21  KKISIKGWVKHFRSN---CFIIISDGSTIKNIQIYVDKHNCFYSFLNKINIGVSLEVIGV 77

Query: 77  VMSRSAETINANIITGQIELSAQKIEILS--VAEELPLPVFGEREYPESIRFKYRFLDLR 134
           V+    +          IE+ A KI I      E+L   +   +E+      +  +L  R
Sbjct: 78  VVFSKGKKQI-------IEIYANKINIYGSFNPEDLQNTILQPKEHSFKKLREQAYLRFR 130

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG----- 189
                  +  R  I  S+      + F   +TPI+T    EGA D    +          
Sbjct: 131 TTIFSSIMRIRHNISFSIHKFFYKKKFYYINTPIITTYDTEGAGDMFRVTNFKNNNNNNN 190

Query: 190 ---SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               F+          Q +    ASG  + +   P FR E   + R   EF+ ++ E+SF
Sbjct: 191 NNLDFFGASTYLTVSGQLQGEAAASGLGKIYTFGPTFRAEKSNTFRHLSEFWMIEPEISF 250

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            E ++I++  E  L+ + +           FL    +     Y         
Sbjct: 251 YELNNIMSLAEEFLKFIIKYVIKHCYEDLYFLEKKKNIFKILYSILDFPFEK 302



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 14/117 (11%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSN 510
                 PF M          ND  ++ A   D++     EI  G  R     V+L+    
Sbjct: 353 YPLKIKPFYMR-------LNNDNKTVAAM--DIIFPYIGEIIGGSQREERYNVLLKRMIE 403

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +  + +           + G  PH G   G +R++  +    N+++V  FP  QN
Sbjct: 404 SNLDTKSLW----WYLNIRRFGSVPHSGFGLGFERLIQFITNISNIKDVIPFPRYQN 456


>gi|304373066|ref|YP_003856275.1| Putative asparaginyl-trna synthetase protein [Mycoplasma hyorhinis
           HUB-1]
 gi|304309257|gb|ADM21737.1| Putative asparaginyl-trna synthetase protein [Mycoplasma hyorhinis
           HUB-1]
          Length = 446

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 52/271 (19%), Positives = 99/271 (36%), Gaps = 13/271 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVL 71
                  + + GW+   R +  I FL+I D       Q+V   D A  E  +++     +
Sbjct: 11  AKHDQQNISIKGWLTNSRGNAKIKFLEINDGSTFENLQLVFKNDKATIEQIETLNLGAAI 70

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G+                  EL   ++ IL  A          +E           +
Sbjct: 71  EVKGVFAYTPQAQQKG-------ELLCSQLTIL--AHSNAEFPIQNQEMSSEFLRSIPHI 121

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
             R       +  R+ +   +       +F+  S+PI+T++  EGA +  V     +  F
Sbjct: 122 RHRTKLFRAVMRIRSTLAFEIHEYFRKHDFLYLSSPIITSNDGEGAGEAFVVDNEEKDFF 181

Query: 192 Y--ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
              A      Q      A GF + +  AP FR E   + +   EF+ ++ E+SF +  DI
Sbjct: 182 NKKATLGVTGQLHAEAYALGFQKVYTFAPTFRAERSNTKKHAAEFWMIEPEVSFYKLKDI 241

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
           ++  +++L+ V +     +     + +   D
Sbjct: 242 IHLGDSLLKTVIKNTIKKHPAEFEYFQKNID 272



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 8/103 (7%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A  +DL+  G  E+  G  R    + + Q   ++ +     +          +
Sbjct: 351 NDDGQTVA-AFDLLVPGIGELIGGSQREVRYDKLFQRLKDLNME----QEDLQWYLDLRK 405

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLM 573
            G     G   G +R++M + G  N+R+   +P +    +L+M
Sbjct: 406 FGNYSSAGFGLGFERLIMYVTGVDNIRDSIPYPRTNK--NLMM 446


>gi|297242836|ref|ZP_06926774.1| lysyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296889047|gb|EFH27781.1| lysyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 565

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 105/247 (42%), Gaps = 12/247 (4%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPDSACFEIAKSVRSEWVLCI 73
            +  + V ++G V  +R  GG+ F+ +    G   Q + +      E  KS +    L  
Sbjct: 123 EETDTEVGIAGRVLFLRNAGGLCFVKLSAGDGTTIQAMVSKKEIGEESIKSFKQMVDL-- 180

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +      I++   TG++ + A +  I + A +    +   +E  +  R +  ++ +
Sbjct: 181 -GDHLYVRGRVISSK--TGELSVFATEWAIAAKALQPLPAL--HKELSDDTRTRKPYIGM 235

Query: 134 RRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             D  +   + +R+R + S+R    + +F+E  TP+L T      AR F           
Sbjct: 236 IADEKIRDMVRRRSRAVASLRRTFDSHDFLEVETPMLQTVHGGAAARPFTTHMNAFDIDL 295

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ + +  +  G +R F+I   FR+E   +   P EF  L+   ++   D I  
Sbjct: 296 Y-LRIAPELFLKRCLVGGIERVFEINRDFRNEGVDATHAP-EFTMLEAYQAYGTYDTIAA 353

Query: 252 TMENVLR 258
             + +++
Sbjct: 354 LTKELIQ 360



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 62/203 (30%), Gaps = 32/203 (15%)

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E   +   G +++ L    T    V       D       +             H+ +  
Sbjct: 385 EWKQITMYGSLSEALGEEITPETSVEHLGAIADKLGVERDEVENH----GKLVEHLWEHF 440

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                  +   ++ DFP      E   +   H                        ++DL
Sbjct: 441 --YEDKLYAPTFVRDFPV-----ETSPLVKGHR----------------TKPGMVEKWDL 477

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIA 540
              GFE+A+G    +   V  + F               +       A   GMPP GG+ 
Sbjct: 478 YVRGFELATGYSELNDPVVQRERFVAQAKDALAGDVEAMDIDEDFIEALGVGMPPAGGMG 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            GIDR+++ L GA  +RE   FP
Sbjct: 538 MGIDRLLIALTGA-TIRETITFP 559


>gi|213410321|ref|XP_002175930.1| asparaginyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212003977|gb|EEB09637.1| asparaginyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 453

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 60/306 (19%), Positives = 118/306 (38%), Gaps = 41/306 (13%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V   ++++GW+  +R    + F+ + D      +         +    +     + + G 
Sbjct: 13  VNEVLQINGWIRSIRKMKNVTFIMLNDGSCYKSLQVVLPKCQND---GLTYGSAISVKGA 69

Query: 77  VMSRSAETINANIITG--QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           +  R              Q+EL A+ + +L        P+  ++   E        L LR
Sbjct: 70  LKCRDRVQNQDLGHKRGPQLELQAELVNLLGENNWKNYPIQ-KKPMSEDYLRSIPHLRLR 128

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV------------ 182
             T+ + +  R  I+  +R  +   +FIE + P++T+S  EGA +               
Sbjct: 129 TSTMAQTMRLRASILRELRRFLDERDFIETNPPLITSSDCEGAGETFQVIKKNIKRNGTT 188

Query: 183 ------PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                 PS +   +  A      Q     +A   +R + + P FR E+ ++ R   EF+ 
Sbjct: 189 KQEDDLPSTIEFFNRPAHLTVSTQLHLEALALALNRVYTVTPAFRAEESKTSRHLAEFWM 248

Query: 237 LDMEMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVS----------------NNFLRICY 279
           L++E SF+++ D +L+  E +++ V  +      +                 N + R+CY
Sbjct: 249 LELEQSFIDELDPLLHLAETLIKSVARQLLRTKHMYMESKEGYLTDRWQSLLNPWHRLCY 308

Query: 280 DDAIRR 285
           DDAI  
Sbjct: 309 DDAIHM 314



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 46/147 (31%), Gaps = 36/147 (24%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  + +    +  ++ D+P             A  PF M           D    K+  
Sbjct: 336 HEQWLTHEVGNKPLFVTDYP------------SAQKPFYMK----------DSTPKKSAC 373

Query: 482 YDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +DL+    G  I     ++   E+                          Q G  PHGG 
Sbjct: 374 FDLLFPEVGEVIGGSLRKDAKQEL------------ASAPKALEWYKDLRQYGSAPHGGF 421

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             GI+R+V  L    NVRE   FP + 
Sbjct: 422 GLGIERLVSYLAREPNVRECIPFPRTA 448


>gi|119496887|ref|XP_001265217.1| lysyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119413379|gb|EAW23320.1| lysyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 467

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 71/314 (22%), Positives = 122/314 (38%), Gaps = 23/314 (7%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           S V  +G +   R  G  +IF DI       QV+ N          + +  + L   G  
Sbjct: 10  SQVT-TGRIRAYRLAGSKLIFFDIFQDGHKVQVMCNIRKLDGVAPDAFKRFYRLLRRGDA 68

Query: 78  MSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            S + +       TG++ + A ++  +LS           E E         R +    D
Sbjct: 69  FSVTGKPH--RTGTGELTVLATELPRLLSPCLHDVPVDAEEHETSPYP----RHVQFLAD 122

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYAL 194
               +I++ R+ II  +R   +  +F+E STPI+ + +    AR F   +        +L
Sbjct: 123 QKAADIIRARSAIIQFLRQFFLDRSFMEVSTPIIGSIAGGAMARPFQTSATEFSDRQLSL 182

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ + + L+  GFD+ F+I P FR+E       P EF   +   ++   +D+++  E
Sbjct: 183 RIAPELWLKRLVVGGFDKVFEIGPSFRNEGLDKTHNP-EFTTCEFYHAYANLEDLMSITE 241

Query: 255 NVLRGVFEEFSNGN----------TVSNNFLRICYDDAIR-RYGTDKPDLRNPIIMHNVT 303
           N+L G+       N            S  F R+ +   I  + G   PDL  P  +  V 
Sbjct: 242 NLLSGMAAHIQEFNKNASLKPPEVDFSAPFRRVDFTTGIEGKIGRRLPDLTTPDALDQVN 301

Query: 304 EHFVHSEFRVFSKI 317
           + F      +    
Sbjct: 302 QLFRDLSLPIPKDP 315



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 3/87 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS---NVGISKEVVENRFGGLYRAFQCGMPP 535
           A + +L  +G EI +     +      + F          +           A + G+P 
Sbjct: 363 AARAELFIDGREIVNTYEEENSPFEQRRKFEDQVRYNKGTDEPAEIDESYLEALEWGLPS 422

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLF 562
            GG   GIDR+ ML  GAK + +V  F
Sbjct: 423 TGGWGCGIDRLCMLFTGAKRIGDVLPF 449


>gi|195426485|ref|XP_002061363.1| GK20764 [Drosophila willistoni]
 gi|194157448|gb|EDW72349.1| GK20764 [Drosophila willistoni]
          Length = 533

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 58/270 (21%), Positives = 107/270 (39%), Gaps = 24/270 (8%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAK---SVRSEWVLCIDGL 76
           V + G VH  R  G   F  +R     I  ++A  D    ++ K   ++  E ++ I   
Sbjct: 92  VWVRGRVHTSRAKGKQCFPILRQQSSTIQCILAVNDIISKQMVKFTGNIPKESIIDIQAK 151

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--------------E 122
            +S   +  +    T  +EL  +++ ++S A+        +   P              +
Sbjct: 152 PVSVPNKIESCTEQT--VELCVEQVFVISQAKSQLPLQIEDASRPLNPDDAGGLNIRVNQ 209

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
             R   R LDLR             +    R  +    F E  TP +     EG   F  
Sbjct: 210 DTRLNNRVLDLRTPANQAIFRLEAGVCRLFRDILTENGFTEIHTPKIQLPD-EGGEYFFT 268

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            +   + ++ A+ Q    ++Q+ +A+ F++ F +   FR ED  + R   EF  LD+EM+
Sbjct: 269 VNYFKETAYLAVSQY--IHRQMAIAADFEKVFTVGAVFRAEDSHTHRHLIEFVGLDLEMT 326

Query: 243 FV-EQDDILNTMENVLRGVFEEFSNGNTVS 271
           F     ++L+T+ N L  +F+   +  +  
Sbjct: 327 FKYHYHEVLHTISNTLTAIFKGLRDQYSRE 356



 Score = 97.4 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 14/119 (11%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K   +  PF TMP                +  +D+   G EI+SG  R H  E +++   
Sbjct: 425 KFPLSARPFYTMPDPDNPKY---------SNSFDMFMRGEEISSGAQRIHDPEYLIERAK 475

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           +  +       +      AF+ G  PH G + G++R+VM  LG  N+R+ S+FP     
Sbjct: 476 HDAVELT----KLAAYIDAFRYGCSPHAGCSIGMERVVMFYLGLNNIRKTSMFPHDPKR 530


>gi|298253472|ref|ZP_06977264.1| lysyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297532867|gb|EFH71753.1| lysyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 565

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 105/247 (42%), Gaps = 12/247 (4%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPDSACFEIAKSVRSEWVLCI 73
            +  + V ++G V  +R  GG+ F+ +    G   Q + +      E  KS +    L  
Sbjct: 123 EETDTEVGIAGRVLFLRNAGGLCFVKLSAGDGTTIQAMVSKKEIGEESIKSFKQMVDL-- 180

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +      I++   TG++ + A +  I + A +    +   +E  +  R +  ++ +
Sbjct: 181 -GDHLYVRGRVISSK--TGELSVFATEWAIAAKALQPLPAL--HKELSDDTRTRKPYIGM 235

Query: 134 RRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             D  +   + +R+R + S+R    + +F+E  TP+L T      AR F           
Sbjct: 236 IADEKIRDMVRRRSRAVASLRRTFDSHDFLEVETPMLQTVHGGAAARPFTTHMNAFDIDL 295

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ + +  +  G +R F+I   FR+E   +   P EF  L+   ++   D I  
Sbjct: 296 Y-LRIAPELFLKRCLVGGIERVFEINRDFRNEGVDATHAP-EFTMLEAYQAYGTYDTIAA 353

Query: 252 TMENVLR 258
             + +++
Sbjct: 354 LTKELIQ 360



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 62/203 (30%), Gaps = 32/203 (15%)

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E   +   G +++ L    T    V       D       +             H+ +  
Sbjct: 385 EWKQITMYGSLSEALGEEITPETSVEHLGAIADKLGVERDEVENH----GKLVEHLWEHF 440

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                  +   ++ DFP      E   +   H                        ++DL
Sbjct: 441 --YEDKLYAPTFVRDFPV-----ETSPLVKGHR----------------TKPGMVEKWDL 477

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIA 540
              GFE+A+G    +   V  + F               +       A   GMPP GG+ 
Sbjct: 478 YVRGFELATGYSELNDPVVQRERFVAQAKDALAGDVEAMDIDEDFIEALGVGMPPAGGMG 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            GIDR+++ L GA  +RE   FP
Sbjct: 538 MGIDRLLIALTGA-TIRETITFP 559


>gi|110751167|ref|XP_623874.2| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           [Apis mellifera]
          Length = 433

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 68/361 (18%), Positives = 126/361 (34%), Gaps = 55/361 (15%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           GW+H VR     IF+DI D      +      +      ++     +  +G ++      
Sbjct: 8   GWIHAVRKMKNNIFIDITDGSTPKMLQIVIPKSN--KPDNLSFGSSIIAEGKLVLSP--- 62

Query: 85  INANIITGQIELSAQKIEILSVAEELP-LPVFGEREYPESIRFKYRFLDLRRDTLHKNIV 143
                  G+IEL    + I+   + +   P    + Y      ++  L  R       + 
Sbjct: 63  ------NGRIELHTNNVTIIGTCDVMDGYPFAPRKHYDMDYIRQFLHLRSRTRRFSSLLR 116

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP-------------------- 183
            R     S+   + ++NFI   TPILT++  EGA +  +                     
Sbjct: 117 LRDMTTASIENYLRSKNFINVHTPILTSNDCEGAGELFLVKPHCENLLKSMKRENMSEEE 176

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           S  N  +F        Q     +A    + +   P FR E+ +S     EFY L+ E++F
Sbjct: 177 SYFNTKAFL---TVSGQLHLETIARSLTKVYTFGPSFRAENSKSRLHLTEFYMLEAELAF 233

Query: 244 VEQ-DDILNTMENVLRGVFEEFSNG-------------NTVSNNFLRICYDDAIRRYGTD 289
           +   DDI+  +E++++ V ++                   ++  F+ I YD+AI     +
Sbjct: 234 INNIDDIMIEIESLIKYVIKDVFEKGAADIHVIGGCEVAWLNKKFICITYDEAINILENN 293

Query: 290 KPDLRNPIIM-HNVTEHF-----VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
              L  PI    N+++        +++      I         +    K      A  D 
Sbjct: 294 ANSLSTPIKFGTNLSKEHELFLVKYNDNIPIFIINWPKESKPFYMKECKDDASKVAAIDL 353

Query: 344 M 344
           +
Sbjct: 354 L 354



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 27/150 (18%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            EL ++  N     +I+++P     +E K       PF M +   ++ K   +       
Sbjct: 311 HELFLVKYNDNIPIFIINWP-----KESK-------PFYMKECKDDASKVAAIDL----- 353

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV    E+  G +R    E +          K    +         + G  P GG   
Sbjct: 354 --LVPTVGELVGGSLREDNYEKL--------KLKLPPASDLSWYLELRKYGNVPTGGFGM 403

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R +  +    N+++   FP   + C+L
Sbjct: 404 GFERFLQHIFNIPNIKDTLPFPRWPHNCNL 433


>gi|119433806|gb|ABL74966.1| Orf (-)2 [Streptoalloteichus hindustanus]
          Length = 433

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 99/253 (39%), Gaps = 15/253 (5%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
             G+ VR++GWVHR R    + F+ +RD  G+ QVV    +        +  E V+ + G
Sbjct: 13  HAGAVVRVAGWVHRRRRLKSVTFVVVRDRSGLAQVVLPASAEP--AVAELPEETVVEVRG 70

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSV--AEELPLPVFGEREYPESIRFKYRFLDL 133
            V +            G  E++   I  LS   A                    +  + L
Sbjct: 71  RVTANPQ-------APGGAEITEPVISALSEPAAAPPFDLYRPAVTATLPTILDHAPVTL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R   L       +  +   R  +    F E  TP +  S  E   +        + ++ A
Sbjct: 124 RHPRLRAGFEVASASVAGFRAALDDLGFTEVRTPKIVGSVTESGANVFGIDYFGRRAYLA 183

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNT 252
             Q+PQ +KQ L    F+R +++ P FR E   + R   ++  LD E+ F  +  D++  
Sbjct: 184 --QSPQLFKQAL-VGVFERVYEVGPVFRAEPHDTTRHLAQYTSLDAELGFVADHHDVMAV 240

Query: 253 MENVLRGVFEEFS 265
           + +V+  + +  +
Sbjct: 241 LRDVVARMVDAVA 253



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF ++  +P             A  PF                   +  +DL+  G E+ 
Sbjct: 319 EFLFVTGYPM------------AKRPFYTHPD--------PERPGYSNSFDLLFRGLELV 358

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H     L A +  G S E  ++        F  GMPPHGG A G++R    LLG
Sbjct: 359 TGGQRLHRRVDYLAALAERGESPEPYQS----YVDVFAHGMPPHGGFAIGLERWTARLLG 414

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+REV+LFP   +  + 
Sbjct: 415 VSNIREVTLFPRDLHRLEP 433


>gi|283782888|ref|YP_003373642.1| lysine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441095|gb|ADB13561.1| lysine--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 565

 Score =  147 bits (372), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 105/247 (42%), Gaps = 12/247 (4%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPDSACFEIAKSVRSEWVLCI 73
            +  + V ++G V  +R  GG+ F+ +    G   Q + +      E  KS +    L  
Sbjct: 123 EETDTEVGIAGRVLFLRNAGGLCFVKLSAGDGTTIQAMVSKKEIGEESIKSFKQMVDL-- 180

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +      I++   TG++ + A +  I + A +    +   +E  +  R +  ++ +
Sbjct: 181 -GDHLYVRGRVISSK--TGELSVFATEWAIAAKALQPLPAL--HKELSDDTRTRKPYIGM 235

Query: 134 RRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             D  +   + +R+R + S+R    + +F+E  TP+L T      AR F           
Sbjct: 236 IADEKIRDMVRRRSRAVASLRRTFDSHDFLEVETPMLQTVHGGAAARPFTTHMNAFDIDL 295

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ + +  +  G +R F+I   FR+E   +   P EF  L+   ++   D I  
Sbjct: 296 Y-LRIAPELFLKRCLVGGIERVFEINRDFRNEGVDATHAP-EFTMLEAYQAYGTYDTIAA 353

Query: 252 TMENVLR 258
             + +++
Sbjct: 354 LTKELIQ 360



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 63/203 (31%), Gaps = 32/203 (15%)

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E   +   G +++ L    T    V       D       D             H+ +  
Sbjct: 385 EWKQITMYGSLSEALGEEITPETSVEHLGAIADKLGVERDDVENH----GKLVEHLWEHF 440

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                  +E  ++ DFP      E   +   H                        ++DL
Sbjct: 441 --YEDKLYEPTFVRDFPV-----ETSPLVKGHR----------------TKPGMVEKWDL 477

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIA 540
              GFE+A+G    +   V  + F               +       A   GMPP GG+ 
Sbjct: 478 YVRGFELATGYSELNDPVVQRERFVAQAKDALAGDVEAMDIDEDFIEALGVGMPPAGGMG 537

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            GIDR+++ L GA  +RE   FP
Sbjct: 538 MGIDRLLIALTGA-TIRETITFP 559


>gi|302660757|ref|XP_003022054.1| hypothetical protein TRV_03795 [Trichophyton verrucosum HKI 0517]
 gi|291185981|gb|EFE41436.1| hypothetical protein TRV_03795 [Trichophyton verrucosum HKI 0517]
          Length = 542

 Score =  147 bits (372), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 69/307 (22%), Positives = 125/307 (40%), Gaps = 24/307 (7%)

Query: 20  FVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIA--KSVRSEWVLCIDGL 76
            V L G +   R  G  ++F D+  +    QV+ N           +  +  + L   G 
Sbjct: 82  TVVLHGRIRSQRTAGKKLVFFDLVHNGHKVQVLCNQRVVGEAGISPEKFKEFYHLLRRGD 141

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR- 135
             S + +       TG+ EL+ +  E+  +       V   ++  E   ++ R ++L   
Sbjct: 142 SFSVTGKPHR----TGRGELTVKTTELPKLISPCLHDVPVHQKELEISPYE-RHVELLSS 196

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYAL 194
            +    +  R+ I +SMR       F+E +TPIL + S    A+ F+  +        +L
Sbjct: 197 PSAANILRARSLITHSMRNFFANREFMEVNTPILASKSGGAIAQPFVTSATEFPDRPLSL 256

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ + + L+  GFDR F+I P FR+E       P EF   +   +F + + ++ T E
Sbjct: 257 RIAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP-EFTTCEFYQAFADLESLIETTE 315

Query: 255 NVLRGVFEEFSNGNT------------VSNNFLRICYDDAIRR-YGTDKPDLRNPIIMHN 301
           ++L  +  E    N              +  + R+ +  AI    G   PDL++   +  
Sbjct: 316 SLLSTLALEVQQLNKKLNNSLSPTTVSFTGPYRRVDFIPAIEEAIGRKLPDLQSDNALSQ 375

Query: 302 VTEHFVH 308
           V E F +
Sbjct: 376 VKEIFAN 382



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 459 FTMPQGG-----MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG- 512
           F M          +S +  +   I + + +L   G EI +     +      + F     
Sbjct: 414 FIMNHPECMSPLSKSYRHPESGQIVSARAELFVEGKEIMNMYEEENSPFEQRRKFQQQLS 473

Query: 513 -ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               E       G  +  + G+PP GG   GIDR+ ML  GA+ + +V  F
Sbjct: 474 FRDPENAGELDEGYLQTLEWGLPPTGGWGCGIDRLCMLFTGARRISDVLSF 524


>gi|302507766|ref|XP_003015844.1| hypothetical protein ARB_06156 [Arthroderma benhamiae CBS 112371]
 gi|291179412|gb|EFE35199.1| hypothetical protein ARB_06156 [Arthroderma benhamiae CBS 112371]
          Length = 542

 Score =  147 bits (372), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 69/307 (22%), Positives = 125/307 (40%), Gaps = 24/307 (7%)

Query: 20  FVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIA--KSVRSEWVLCIDGL 76
            V L G +   R  G  ++F D+  +    QV+ N           +  +  + L   G 
Sbjct: 82  TVVLHGRIRSQRTAGKKLVFFDLVHNGHKVQVLCNQRVVGEAGISPEKFKEFYHLLRRGD 141

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR- 135
             S + +       TG+ EL+ +  E+  +       V   ++  E   ++ R ++L   
Sbjct: 142 SFSVTGKPHR----TGRGELTVKTTELPKLISPCLHDVPVHQKELEISPYE-RHVELLSS 196

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYAL 194
            +    +  R+ I +SMR       F+E +TPIL + S    A+ F+  +        +L
Sbjct: 197 PSAANILRARSLITHSMRNFFANREFMEVNTPILASKSGGAIAQPFVTSATEFPDRPLSL 256

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ + + L+  GFDR F+I P FR+E       P EF   +   +F + + ++ T E
Sbjct: 257 RIAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP-EFTTCEFYQAFADLESLIETTE 315

Query: 255 NVLRGVFEEFSNGNT------------VSNNFLRICYDDAIRR-YGTDKPDLRNPIIMHN 301
           ++L  +  E    N              +  + R+ +  AI    G   PDL++   +  
Sbjct: 316 SLLSTLALEVQQLNKKLNNSLSPTTVSFTGPYRRVDFIPAIEEAIGRKLPDLQSDNALSQ 375

Query: 302 VTEHFVH 308
           V E F +
Sbjct: 376 VKEIFAN 382



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 459 FTMPQGG-----MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG- 512
           F M          +S +  +   I + + +L   G EI +     +      + F     
Sbjct: 414 FIMNHPECMSPLSKSYRHPESGQIVSARAELFVEGKEIMNMYEEENSPFEQRRKFQQQLS 473

Query: 513 -ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               E       G  +  + G+PP GG   GIDR+ ML  GA+ + +V  F
Sbjct: 474 FRDPENAGELDEGYLQTLEWGLPPTGGWGCGIDRLCMLFTGARRISDVLSF 524


>gi|327296545|ref|XP_003232967.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326465278|gb|EGD90731.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 947

 Score =  147 bits (372), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 65/303 (21%), Positives = 120/303 (39%), Gaps = 26/303 (8%)

Query: 15  SDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDS-----ACFEIAKSVRSE 68
              G  +     +H VR  G    FL  R      Q V + +           A+ +   
Sbjct: 135 EMKGQELTFRARLHVVRRMGAKFAFLVFRQQLHTLQGVLHTEPKLRSANMIYWAERIPVG 194

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----------- 117
            +L + G + +         I   ++E+  +++ +    EE       E           
Sbjct: 195 SILKVKGRLKAPDVPVFGTTIHNLELEI--EELHVAVCREEPVPFSVYEAELAGAHEERL 252

Query: 118 ----REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
               ++ P+  R   R LDLR DT       ++ I    R  + A+NFIE  +P L A++
Sbjct: 253 EGIRQKIPDRTRLSNRILDLRTDTSQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQAAA 312

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            E        +   + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R   E
Sbjct: 313 TESGASVFGVNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTE 370

Query: 234 FYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           +  LD+EM+  E   + L  +++VL+ +F+       +    ++  +      +  + P 
Sbjct: 371 YTGLDIEMAIEEHYHEALEVLDSVLKSIFKTIYEKYRLEIEVIKHHFPSEDLVWLDETPI 430

Query: 293 LRN 295
           +  
Sbjct: 431 ISF 433



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 28/156 (17%)

Query: 415 DARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN 472
             R+ I   LG ++        +I+D           K      PF  MP    E     
Sbjct: 460 GTRDEI--RLGELVKEKFHTDYYILD-----------KFPATARPFYAMPHPDDERF--- 503

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                    +D+   G EI SGG R H  +++ +    VGI    +E         F+ G
Sbjct: 504 ------TLSFDIFVRGQEIVSGGQRIHHPDLLDKRMREVGIDPSTMEE----YMEGFKWG 553

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            PPH G   G++R++ML+L   N+R  SLF      
Sbjct: 554 APPHAGAGIGLERLLMLILKLGNIRLGSLFHRDPKS 589


>gi|326474610|gb|EGD98619.1| lysyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 567

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 71/320 (22%), Positives = 128/320 (40%), Gaps = 27/320 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEI 61
           +Y T    +    D    V L G +   R  G  ++F D+  +    QV+ N        
Sbjct: 93  KYDTIQPDETVEED---TVVLHGRIRSQRTAGKKLVFFDLVHNGHKVQVLCNQRVVGEAG 149

Query: 62  A--KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              +  +  + L   G   S + +       TG+ EL+ +  E+  +       V   ++
Sbjct: 150 ISPEKFKEFYHLLRRGDSFSVTGKPHR----TGRGELTVKTTELPKLISPCLHDVPVHQK 205

Query: 120 YPESIRFKYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
             E   ++ R ++L    +    +  R+ I +SMR       F+E +TPIL + S    A
Sbjct: 206 ELEISPYE-RHVELLSSPSAANVLRARSLITHSMRNFFANREFMEVNTPILASKSGGAIA 264

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F+  +        +L  AP+ + + L+  GFDR F+I P FR+E       P EF   
Sbjct: 265 QPFVTSATEFPDRPLSLRIAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP-EFTTC 323

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNT------------VSNNFLRICYDDAIRR 285
           +   +F + + ++ T E++L  +  E    N              +  + R+ +  AI  
Sbjct: 324 EFYQAFADLESLIETTESLLSTLALEVQQLNKKLNNSLSPTTVSFTGPYRRVDFIPAIEE 383

Query: 286 -YGTDKPDLRNPIIMHNVTE 304
             G   PDL++   +  V E
Sbjct: 384 AIGRKLPDLQSDDALSQVKE 403



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 459 FTMPQGG-----MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG- 512
           F M          +S +  +   I + + +L   G EI +     +      + F     
Sbjct: 439 FIMNHPECMSPLSKSYRHPENGQIVSARAELFVEGKEIMNMYEEENSPFEQRRKFQQQLS 498

Query: 513 -ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               E       G  +  + G+PP GG   GIDR+ ML  GA+ + +V  F
Sbjct: 499 FRDPENAGELDEGYLQTLEWGLPPTGGWGCGIDRVCMLFTGARRISDVLSF 549


>gi|121702897|ref|XP_001269713.1| lysyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119397856|gb|EAW08287.1| lysyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 584

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 72/307 (23%), Positives = 118/307 (38%), Gaps = 22/307 (7%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           RL G +   R  G  +IF DI  +    QV+ N         +S +  + L   G   S 
Sbjct: 129 RLVGRIRTYRLAGSKLIFFDIAQNGHKVQVMCNIRRLDGVSPESFKKFYRLLRRGDAFSV 188

Query: 81  SAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTL 138
                      G++ + A ++  +LS           E E         R +  L     
Sbjct: 189 IGRPH--RTARGELTVLATELPRMLSPCLHDVPVDAKEHETSPYP----RHVQFLADPKT 242

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQA 197
              I  R+ II  +R   +  +F+E STPI+ + +    AR F   +        +L  A
Sbjct: 243 ADIIRARSAIIQFLRQFFLDRSFMEVSTPIVGSIAGGAIARPFHTSATEFPDRQLSLRIA 302

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ + + L+  GFDR F+I P FR+E       P EF   +   ++   +D+++  EN+L
Sbjct: 303 PELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP-EFTTCEFYHAYANLEDLMSITENLL 361

Query: 258 RGVFEEFSNGN----------TVSNNFLRICYDDAI-RRYGTDKPDLRNPIIMHNVTEHF 306
            G+       N            S  F R+ +   I  + G   PDL  P  +  V + F
Sbjct: 362 SGMAAHIQEFNKNATLSPPEVDFSTPFRRVDFTTGIEEKIGRKLPDLDAPDALDQVKQLF 421

Query: 307 VHSEFRV 313
           +     +
Sbjct: 422 IDLSISI 428



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG---GLYRAFQCGMPP 535
           A + +L   G E+ +     +      + F +     +  +           A + G+P 
Sbjct: 480 AARAELFIEGREMVNTYEEENSPFEQRRKFEDQVRYSKAADESAEVDESYLEALEWGLPS 539

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLF 562
            GG   GIDR+ ML  GAK + +V  F
Sbjct: 540 TGGWGCGIDRLCMLFTGAKRIGDVLPF 566


>gi|82596106|ref|XP_726125.1| asparaginyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23481400|gb|EAA17690.1| asparaginyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 576

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 62/417 (14%), Positives = 118/417 (28%), Gaps = 81/417 (19%)

Query: 17  VGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLC 72
           +   V + GW   VR  GG    F+++ D      +    N +   ++            
Sbjct: 82  IDQLVVVCGWSKAVRKQGGGRFCFVNLNDGSCHLNLQIVVNQNIDNYDKLLKCGIGCCFR 141

Query: 73  IDGLVMSRSAETINAN-IITGQIEL-----SAQKIEILSVAEELPLPVFGEREYPESIRF 126
             G ++    +      ++   +EL     S    EI     +       ++ + +    
Sbjct: 142 FTGTLILSPVQNTEKKGLLNQNVELTLTDNSIHSFEIYGENLDPQKYPLSKKNHGKEFLR 201

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           +   L  R   +   +  R  ++ S      +  FI   TP++T S  EG  +    + +
Sbjct: 202 EVAHLRPRSYFISSVMRIRNALMLSTHLFFQSRGFICIQTPLITTSDCEGGGEMFTVTTL 261

Query: 187 ---------------------------------------------NQGSFY---ALPQAP 198
                                                         +  F+   A     
Sbjct: 262 FNEEGDINSIPKTKKKINNNQIVKREDQNTNELETNNNTNQYIVDFKKDFFSKQAFLTVS 321

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            Q     + S     +   P FR E+  + R   EF+ ++ EM+F +  D +   E  ++
Sbjct: 322 GQLSLENLCSSMGDVYTFGPTFRAENSHTSRHLAEFWMIEPEMAFADIYDNMEVAEAYIK 381

Query: 259 GVFEEFSNGNTVS---------------------NNFLRICYDDAIRRYGTDKPDLRNPI 297
                  N N                        +NF +I Y +AI        +   PI
Sbjct: 382 YCIRYVLNNNFHDIYYFEENVEKGLIDRLKNILNDNFAKITYTNAIDLLTKYSNNFEVPI 441

Query: 298 I--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
              M   +EH      ++F K + V    +           +      M+      G
Sbjct: 442 KWGMDLQSEHERFISEQIFKKPVIVYNYPKDLKAFYMKLNDDNKTVAAMDVLVPKIG 498



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 4/96 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           +K ND     A    LV    E+  G  R    E++ +  +   ++       +    + 
Sbjct: 478 MKLNDDNKTVAAMDVLVPKIGEVIGGSQREDNLELLDKMINEKKLNI----ESYWWYRQL 533

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            + G  PH G   G +R++ML+ G  N+++   FP 
Sbjct: 534 RKYGTHPHSGFGLGFERLIMLVTGVDNIKDTIPFPR 569


>gi|213405907|ref|XP_002173725.1| cytoplasmic asparagine-tRNA ligase Nrs1 [Schizosaccharomyces
           japonicus yFS275]
 gi|212001772|gb|EEB07432.1| cytoplasmic asparagine-tRNA ligase Nrs1 [Schizosaccharomyces
           japonicus yFS275]
          Length = 570

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 103/291 (35%), Gaps = 25/291 (8%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS--EWVLCIDGL 76
             V++ GWVHR+R   GIIF+ +RD  G  Q V   D       + + +  E  + + G 
Sbjct: 144 KRVKVYGWVHRLRNQKGIIFIVLRDGTGYLQAVLTGDVYEKANYEFLTAGPESAIELRGT 203

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFLDLR 134
           +              G  EL      I+  A   E         E   S+    R L +R
Sbjct: 204 LKPVPEG----KSAPGGHELVVDYYTIVHAAPIGEEAFTNQLNAEADPSVLLDQRHLVIR 259

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +T    +  R R + ++R    A +  E + P +  +  EG           Q ++  L
Sbjct: 260 GETASAVLKVRARALRAVRDTYEALHLTEVTPPCMVQTQVEGGSTLFKLDYYGQPAY--L 317

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y +  +       F I   FR E   + R   E+  ++ E+ F++ +  L  +E
Sbjct: 318 TQSSQLYLEASLP-ALGDVFCIQESFRAEKSLTRRHLSEYTHVEAELVFLDFETYLQHLE 376

Query: 255 NVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKP 291
             +    E                         F+R+ Y DAI+       
Sbjct: 377 EFICQTVERLLADPVAAPLIKQLNPGFKMPERPFMRLKYADAIKYLNEHNI 427



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R    + +L  +   GI        +       + G  PHGG   G+
Sbjct: 487 LMPNVGEIVGGSMRIDDMDELLAGYKREGIDPSP----YYWFTDQRKYGSAPHGGYGLGL 542

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R +  LL    VRE  LFP     C  
Sbjct: 543 ERFLAWLLNRYTVRECCLFPRFTERCKP 570


>gi|307069665|ref|YP_003878142.1| lysyl-tRNA synthetase [Candidatus Zinderia insecticola CARI]
 gi|306482925|gb|ADM89796.1| lysyl-tRNA synthetase [Candidatus Zinderia insecticola CARI]
          Length = 495

 Score =  147 bits (371), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 104/256 (40%), Gaps = 17/256 (6%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHY-----GITQVVANPDSACFEIAKSVRSEWVLCID 74
            V LSG +   R  G I F +IRD       GI Q+  N ++   +    +++  +  I 
Sbjct: 56  KVSLSGRIILKRIMGKISFFNIRDFSKKNKIGIIQLYINLNNIGNKKYIEIKNYDLGDII 115

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
                     I     T ++ ++  KI++++ +                 ++  R+LD  
Sbjct: 116 ------GIIGILFKTNTNELSVNVNKIKLITKSLRPLPNKIYNNLN--YKKYYKRYLDFI 167

Query: 135 RD-TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            +       +KR  IIN +R      NF+E  TPIL        A  F+          +
Sbjct: 168 MNSENMNIFIKRIMIINKIRSFFKKNNFLEVETPILHNIPGGAEAIPFITYHNKFYKKMF 227

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+ Y + L+  GF+R ++I   FR+E   S   P EF  L+  +++V    I+  
Sbjct: 228 -LRISPELYLKKLIIGGFERIYEINKSFRNEGISSTHNP-EFTILEFYITYVNYKWIMKF 285

Query: 253 MENVLRGVFEEFSNGN 268
           +E  ++ +  + +   
Sbjct: 286 VEKFIKNIIYKTNKNY 301



 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 3/88 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG---LYRAFQCGMPP 535
             +++L     EIA+G    +  E     F+   + K     ++       +A + GMPP
Sbjct: 405 TERFELFIFNLEIANGFTELNDPEDQDIRFNKQILEKNKKNIKYNYDYDYIKALEYGMPP 464

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             G   GIDR+VM+L    N++++ LFP
Sbjct: 465 TSGCGIGIDRLVMILNNISNIKDIILFP 492


>gi|239609302|gb|EEQ86289.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 577

 Score =  147 bits (371), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 71/409 (17%), Positives = 140/409 (34%), Gaps = 43/409 (10%)

Query: 4   YRTHSCGDLGVSDVGSF---------VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVAN 53
            R+ SC +                  V + G +   R  G  +IFLD+  +    Q++ N
Sbjct: 99  KRSISCDEFHSKYKDIKPNETAEQDLVVIYGRIQSTRIAGSKLIFLDLVQNGRKVQILCN 158

Query: 54  PDS-----ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVA 107
                      E  K              + R A         G++ ++A ++ ++++  
Sbjct: 159 QRHLDGTGVTPEKFKQFYH----------LLRPAIGKPHRTGRGELSVTASELPKLITPC 208

Query: 108 EELPLPVFGEREYPESIRFKYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                    E+E         R + L    T    +  R+ II  +R   + ++F+E  T
Sbjct: 209 LHDIPLRIKEQESSPY----DRHVQLLSSPTAADILRARSSIIQYIRTFFLDKSFMEVET 264

Query: 167 PILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           PIL + +    AR F   +        +L  AP+ + + L+  GFD+ F+I   FR+E  
Sbjct: 265 PILASVAGGAVARPFETSATEFPDRPLSLRIAPELWLKRLVVGGFDKVFEIGQSFRNEGL 324

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
                P EF   +   +F + + +++  E++  G+ +   N N             A   
Sbjct: 325 DKTHNP-EFTTCEFYHAFADLETLISLTESIFTGLSQHVHNLNQTLPTLSPTTASFAAPF 383

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
              D        + H + +            IL +   +E    P           DR++
Sbjct: 384 SRLDFIPDLEAAMGHKLPDFVSTPTEEAAKIILDL---FEQLHHPPPTNATLPRLLDRLS 440

Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPVAK-HLNIVNTEAIRVRLDM 393
                       +I        +   + P++K  ++  N + +  R ++
Sbjct: 441 SIYLEPQCKNPTFII------NHPECLSPLSKSFIHPANGQVVTARAEL 483



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 6/94 (6%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG------GLYRA 528
             +   + +L  +  E+ +     +      + F      +       G         +A
Sbjct: 474 GQVVTARAELFVDKREMVNMYEEENSPFEQRRKFEIQLGFQGQAVEEEGEGKMDESYVQA 533

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            Q G+PP GG   G+DR+VML  GA  + +V  F
Sbjct: 534 LQWGLPPTGGWGCGVDRLVMLFTGAGRIGDVLSF 567


>gi|300783257|ref|YP_003763548.1| nondiscriminating aspartyl-tRNA synthetase [Amycolatopsis
           mediterranei U32]
 gi|299792771|gb|ADJ43146.1| nondiscriminating aspartyl-tRNA synthetase [Amycolatopsis
           mediterranei U32]
          Length = 405

 Score =  147 bits (371), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 20/246 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG+ VR++GWVHR R    + F+ +RD  G+ QVV    +   E                
Sbjct: 15  VGARVRVAGWVHRRRRLKSVTFVVVRDRSGLAQVVLRGAAPPEE---------------T 59

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-GEREYPESIRFKYRFLDLRR 135
           V+   A         G +EL+   +E L+ A   P  ++             +  + LR 
Sbjct: 60  VVEVHATVSANPRAPGGVELTEPVVETLAEAVPPPFDLYRPAVTASLPAILDHAPVALRH 119

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
             L +        +   R  + +  F E  TP + AS+ E            + ++ A  
Sbjct: 120 PALKERFAVAAAAVRGFRSTLDSRGFTEVHTPKIVASATESGGCVFGIDYFGRPAYLA-- 177

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTME 254
           Q+PQ +KQ L    F+R +++ P FR E   + R   ++  LD+E+ F+ +  D++  + 
Sbjct: 178 QSPQFFKQAL-VGVFERVYEVGPVFRAEPHDTARHLAQYTSLDVELGFIRDHHDVMAVLR 236

Query: 255 NVLRGV 260
            VL G+
Sbjct: 237 EVLAGM 242



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 27/139 (19%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
              +  +F ++  +P             A  PF                   +  +DL+ 
Sbjct: 288 RREHGSDFLFVTGYPM------------AKRPFYTHPD--------PARPRYSNSFDLLF 327

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
            G E+ +GG R H         ++           +    +AF  GMPPHGG A G++R 
Sbjct: 328 RGVELVTGGQRLHR-------HADYLAVLGDAAPEYADYLQAFAHGMPPHGGFAIGLERW 380

Query: 547 VMLLLGAKNVREVSLFPMS 565
              LLGA NVREV+LFP  
Sbjct: 381 TARLLGAANVREVTLFPRD 399


>gi|170782886|ref|YP_001711220.1| aspartyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157456|emb|CAQ02645.1| aspartyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 438

 Score =  147 bits (370), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 11/268 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT    +L   D G  V +SGWV  VR    I F+ +RD  G  Q+           A +
Sbjct: 6   RT-LIKNLAALDDGD-VAVSGWVETVRDQKKIQFVILRDESGAVQLTYKRQGDEDATADT 63

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +     L     + +      +  +  G +E+    IE+ + A           +     
Sbjct: 64  ISG---LAAGTFLTATGTLKHDERVKLGGLEIGLSGIEVAAAAIPETPIAA---DSSIDK 117

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           R  +RF+DLR          +T +++++R   +  +FIE  +P L A+  E   +     
Sbjct: 118 RLDWRFIDLRAPRNSLIFRVQTTLVHALRTYWVEHDFIEVFSPKLMATPSESNAELFKVD 177

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             +  ++ A  Q+PQ +KQ+  ++GF + F++ P FR +   + R   EF  +D E+S++
Sbjct: 178 YFDGVAYLA--QSPQFFKQMAQSAGFGKMFEVGPAFRADPSFTSRHATEFTSVDAEISWI 235

Query: 245 E-QDDILNTMENVLRGVFEEFSNGNTVS 271
           E  +D+    E ++          +   
Sbjct: 236 ESHEDVARLQEELIVAALTAVKEKHGDE 263



 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 24/130 (18%)

Query: 431 CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
             EF ++ D+P                PF   +         D        YDL+ NG E
Sbjct: 322 GHEFVFLTDYP------------STIRPFYHMRNA------EDPS--ITNSYDLIWNGVE 361

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I +G  R H  +V+       G+         G     F+ G+PPHGG   G++R++MLL
Sbjct: 362 ITTGAQREHRVDVLEAQAREKGLDP----EELGSYLDFFRYGVPPHGGFGMGLNRVLMLL 417

Query: 551 LGAKNVREVS 560
           L   N+REV+
Sbjct: 418 LHQSNLREVT 427


>gi|330723313|gb|AEC45683.1| asparaginyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 446

 Score =  147 bits (370), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 52/271 (19%), Positives = 99/271 (36%), Gaps = 13/271 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVL 71
                  + + GW+   R +  I FL+I D       Q+V   D A  E  +++     +
Sbjct: 11  AKHDQQNISIKGWLTNSRGNAKIKFLEINDGSTFENLQLVLKNDKATIEQIETLNLGAAI 70

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G+                  EL   ++ IL  A          +E           +
Sbjct: 71  EVKGVFAYTPQAQQKG-------ELLCSQLTIL--AHSNAEFPIQNQEMSSEFLRSIPHI 121

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
             R       +  R+ +   +       +F+  S+PI+T++  EGA +  V     +  F
Sbjct: 122 RHRTKLFRAVMRIRSTLAFEIHEYFRKHDFLYLSSPIITSNDGEGAGEAFVVDNEEKDFF 181

Query: 192 Y--ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
              A      Q      A GF + +  AP FR E   + +   EF+ ++ E+SF +  DI
Sbjct: 182 NKKATLGVTGQLHAEAYALGFQKVYTFAPTFRAERSNTKKHAAEFWMIEPEVSFYKLKDI 241

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
           ++  +++L+ V +     +     + +   D
Sbjct: 242 IHLGDSLLKTVIKNTIKKHPAEFEYFQKNID 272



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 8/103 (7%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A  +DL+  G  E+  G  R    + + Q   ++ +     +          +
Sbjct: 351 NDDGQTVA-AFDLLVPGIGELIGGSQREVRYDKLFQRLKDLNME----QEDLQWYLDLRK 405

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLM 573
            G     G   G +R++M + G  N+R+   +P +    +L+M
Sbjct: 406 FGNYSSAGFGLGFERLIMYVTGVDNIRDSIPYPRTNK--NLMM 446


>gi|238486444|ref|XP_002374460.1| lysyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
 gi|220699339|gb|EED55678.1| lysyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
          Length = 552

 Score =  147 bits (370), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 24/308 (7%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           RL G +   R  G  +IF DI  +    QV+ N         ++ +  + L   G   S 
Sbjct: 106 RLVGRIRTYRLAGSKLIFFDIVQNGHKVQVMCNLRQLPGITPEAFKKLYRLLRRGDAFSV 165

Query: 81  SAETINANIITGQIELSAQKI-EILSVA-EELPLPVFGEREYPESIRFKYRFLD-LRRDT 137
           +          G++ + A ++ ++LS    ++PL        P       R +  L   T
Sbjct: 166 TGRPH--RTGRGELTVVATELPQLLSPCLHDVPLDAKEHENSPYP-----RHVQFLADQT 218

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQ 196
               I  R+ II  +R   +  +F+E +TPI+ + +    AR F   +        +L  
Sbjct: 219 TTDIIKARSAIIQYLRQFFLDRSFMEVNTPIVNSIAGGAIARPFYTSATEFPDRQLSLRI 278

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + + L+  GFDR F+I P FR+E       P EF   +   ++   +D+L+  E++
Sbjct: 279 APELWLKRLVVGGFDRVFEIGPSFRNEGIDKTHNP-EFTTCEFYHAYANLEDLLSMTESL 337

Query: 257 LRGVFEEFSNGN----------TVSNNFLRICYDDAI-RRYGTDKPDLRNPIIMHNVTEH 305
           L G+ +   + N            S  F RI +   I  + G   PDL +P  +  V + 
Sbjct: 338 LSGMAQHIRDTNKDGTLKPTEVDFSTPFRRIDFLTGIEEKIGRKLPDLTSPDAVAQVKQL 397

Query: 306 FVHSEFRV 313
           F      +
Sbjct: 398 FKDLSLEI 405



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG---GLYRAFQCGMPP 535
           A + +L   G E+ +     +      + F +     +  +           A + G+P 
Sbjct: 457 AARGELFIEGKEVVNTYEEENSPSEQRRKFEDQVRYSKDADESSEIDESYLEALEWGLPA 516

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLF 562
            GG   GIDR+ ML  GAK + +V  F
Sbjct: 517 TGGWGCGIDRLCMLFTGAKRIADVLPF 543


>gi|327355477|gb|EGE84334.1| asparaginyl-tRNA synthetase Slm5 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 563

 Score =  147 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 58/276 (21%), Positives = 111/276 (40%), Gaps = 25/276 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             S     +R+ G++  VR      F +I D   I  V A         A  + +   + 
Sbjct: 50  SSSLDNRQIRVQGFIRSVRKQKRFAFAEISDGSTIKSVQA---ILTPAQAARLSTGSAID 106

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G+          ++      EL A +++I   A+    P+  +   P+ +R +   L 
Sbjct: 107 ISGVWQPCPPGKKQSH------ELHATEVKITGEADPESYPIQKKYHSPDFLR-QIPHLR 159

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFLVPSRVNQ- 188
           LR          R+  I  +     +    NF++   P++T+S  EGA +    +  ++ 
Sbjct: 160 LRTPFNSLLSRFRSECIFQLGQVFHSRLGSNFVQVQPPLITSSDCEGAGEVFTVAPGDKV 219

Query: 189 -----GSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                G F+  P+    + Q + +   A+     + ++P FR E   + R   EFY L++
Sbjct: 220 GDGEKGEFFRSPKYLTVSSQLHLE-AYAAELGNVWTLSPTFRAEKSDTPRHLSEFYMLEV 278

Query: 240 EMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVSNNF 274
           EM+FV   D + +T+E+++R + +           F
Sbjct: 279 EMNFVHSLDSLTDTVESLIRDLTKRLYESPVAEEIF 314



 Score = 61.2 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 51/192 (26%), Gaps = 57/192 (29%)

Query: 418 NHIAQELGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM---------PQGGME 467
            H+  E  I++        ++  +P                PF M               
Sbjct: 377 LHLEHEKFIVDEVGKGCPVFVTHYP------------KMVKPFYMAPSIVLEEPSPASPA 424

Query: 468 SLKGNDLLSIKAF--QYDLVCNG-FEIASGGIRNHMSEVMLQAFSNVGI----------- 513
            L  +D          +DL+     E+  G IR H    ++Q     G+           
Sbjct: 425 ELSNHDPAQTMETVACFDLLMPEICEVVGGSIREHRLPNLIQNMREHGLIRKMPEAGPDA 484

Query: 514 ---------------------SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
                                  +             + G  PHGG   G DR +  L G
Sbjct: 485 DCASSSSHLAAEQGSSIYPYLQPDEYIGPMQWYADLRRWGSAPHGGFGLGFDRYLGYLAG 544

Query: 553 AKNVREVSLFPM 564
             ++R+V  FP 
Sbjct: 545 VSSLRDVVPFPR 556


>gi|331220633|ref|XP_003322992.1| asparaginyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309301982|gb|EFP78573.1| asparaginyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 576

 Score =  147 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 61/288 (21%), Positives = 114/288 (39%), Gaps = 23/288 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +    VRL GWVHR+R   G+IF+ +RD  G  Q V     A    A ++ +E  + +
Sbjct: 144 LENRNIKVRLFGWVHRLRQQKGLIFVVLRDGTGFLQCVLTGKLAQTYDALTLTTESTIQL 203

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFL 131
            G V++               EL      I+  A  +          +         R L
Sbjct: 204 TGKVVALPEG----KSAPEGHELQVDWWSIVGRAPGDAEAFSNQISEDSGPDTLADRRHL 259

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +T    +  R+ ++++ R      + +E + P +  +  EG           + ++
Sbjct: 260 VIRGETASSVLKVRSALLDAFRKSYAKISMVEVTPPCMVQTQVEGGSTLFEFGYYGEKAY 319

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L Q+ Q Y +  + S     F I   FR E  ++ R   E+  L+ E++F+  +D+L 
Sbjct: 320 --LTQSSQLYLETCLPS-LGDCFCIQESFRAEKSKTRRHLSEYTHLEGELAFLTFEDLLA 376

Query: 252 TMENV-------------LRGVFEEFS-NGNTVSNNFLRICYDDAIRR 285
            +E +             ++G+ E  + +       F R+ Y +AI  
Sbjct: 377 HIEELICSTLSILLEDPKIKGLVESLNPSFQMPIRPFKRMEYREAIDW 424



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+    EI  G +R    E +L A+   GI      + +       + G   HGG   G+
Sbjct: 493 LMPGVGEIVGGSMRMTGYEELLAAYKGAGIPA----DPYYWYTDQRKYGTCEHGGYGLGV 548

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R +  LLG  +VRE SL+P     C  
Sbjct: 549 ERFLAWLLGRPHVRECSLYPRYTARCTP 576


>gi|309811638|ref|ZP_07705417.1| lysine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308434439|gb|EFP58292.1| lysine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 1108

 Score =  147 bits (370), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 10/248 (4%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V LSG V  +R  GG++F  I +H    QVV    +   ++ +  R        G  +S 
Sbjct: 666 VSLSGRVRALRDLGGVVFAFIEEHDVRLQVVLEAGAVDPQLMRLWRRT---VDVGDHVSV 722

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
           +    ++    G+  L A    + S +   P+P           R + R+LDL  +    
Sbjct: 723 TGTLGHSR--RGEPSLLASSWCMASKSLR-PIPSDHTGFTNPEARVRQRYLDLIVNKDSA 779

Query: 141 NIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
           N+++ R+R ++++R       ++E  TP+L A      AR F           Y L  AP
Sbjct: 780 NLLRARSRGVSALRRAFEERGYMEVETPMLQAVHGGASARPFRTHINAYNADLY-LRIAP 838

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L   G DR F++   FR+E   +   P EF  ++   +  + + +      ++ 
Sbjct: 839 ELFLKELAVGGMDRIFELNRNFRNEGADATHNP-EFTSVEAYAAHGDYNTMRVLTRELVL 897

Query: 259 GVFEEFSN 266
            V      
Sbjct: 898 EVATAIHG 905



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 50/159 (31%), Gaps = 28/159 (17%)

Query: 412  FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
             A +    +  EL  +        +  DFP      E   +   H               
Sbjct: 969  TAGEVVLELYDEL--VEGQTTMPVFYTDFPL-----ETSPLTRTHR-------------- 1007

Query: 472  NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYR 527
             D     + ++DLV  G EI +               +                      
Sbjct: 1008 TDPK--LSERWDLVAFGAEIGTAYSELVDPVDQRNRLTEQSFKAAAGDPEAMEVDENFLA 1065

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            A +  MPP GG+  G+DR++M+L G  N+R    FP ++
Sbjct: 1066 ALEYAMPPTGGLGIGVDRLIMMLTG-NNIRATLAFPFTR 1103


>gi|328906696|gb|EGG26468.1| lysine--tRNA ligase [Propionibacterium sp. P08]
          Length = 510

 Score =  147 bits (370), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 58/278 (20%), Positives = 102/278 (36%), Gaps = 23/278 (8%)

Query: 5   RTHSCGDLGV--------------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           R H+   +                 +    V + G V  VR  G + F  ++D +  T  
Sbjct: 41  RDHTLAQIRQKYTDGNGKLILAPGEETADEVTVGGRVVFVRNTGKLCFASLQDGFTETSN 100

Query: 51  --VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
                   +  E+     + W   +D   +          +++ + ELS    E    A+
Sbjct: 101 GERLQVMLSKAEVGDESLAAWKSDVD---LGDHVWVRGRVVVSRRGELSIMAAEWRMAAK 157

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTP 167
            L       +E  E  R + R++DL      + +V+ R  I  ++R  +    F+E  TP
Sbjct: 158 ALRPLPTLHKELSEETRVRRRYVDLVVREESRQMVRTRAAITRAVRRALDERGFLEIETP 217

Query: 168 ILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           IL        AR F            +L  A + Y +  M  G DR +++   FR+E   
Sbjct: 218 ILQLVHGGAAARPFNTHLNAFDLDM-SLRIALELYLKRAMVGGTDRVYEMGRVFRNEGID 276

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           S     EF  L+  MS+  Q  I   +++++  V +  
Sbjct: 277 SS-HSAEFSMLEAYMSWGNQFTIAEVIKDIIMAVADAL 313



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 28/157 (17%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             A      +  EL  +  +     ++ D+P        + +   H              
Sbjct: 372 WEAGKVVMELFGEL--VEPDLINPTFVCDYP-----AIAQPLARPHR------------- 411

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLY 526
            +D   ++A  +DL+  G E  +G        +  +  +   ++                
Sbjct: 412 -DDPRMVEA--WDLIIGGMERGTGFSELVDPVIQREVLTKQSLAAAAGDLEAMQLDEDFL 468

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + G PP GG+  G+DR+VML   A  +RE  LFP
Sbjct: 469 EALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFP 504


>gi|15836464|ref|NP_300988.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|8979305|dbj|BAA99139.1| lysyl tRNA synthetase [Chlamydophila pneumoniae J138]
          Length = 527

 Score =  146 bits (369), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 60/327 (18%), Positives = 120/327 (36%), Gaps = 40/327 (12%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-------------IAKSVR 66
            VR +G +   R  G   F  I DH    QV+ N +                  I K + 
Sbjct: 66  RVRFAGRLVLFRAMGKNAFGQILDHNQTIQVMFNREFTSVHGLSEDAEITPIKFIEKKLD 125

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              +L IDG +             +G++ +  + + +L  +  L LP        + +R+
Sbjct: 126 LGDILGIDGYLFFT---------HSGELTVLVETVTLLCKSL-LSLPDKHAGLSDKEVRY 175

Query: 127 KYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
           + R+LDL     +    VKR+ II  +R  M A  F+E  TPIL              + 
Sbjct: 176 RKRWLDLISSREVSDTFVKRSYIIKLIRNYMDAHGFLEVETPILQNIYGGAEAKPFTTTM 235

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               S   L  + +   + ++  G  R +++   FR+E       P EF  ++   ++++
Sbjct: 236 EALHSETFLRISLEIALKKILVGGAPRIYELGKVFRNEGIDRTHNP-EFTMIEAYAAYMD 294

Query: 246 QDDILNTMENVLRGVFEEFSNGN---------------TVSNNFLRICYDDAIRRYGTDK 290
             +++  +EN++  +    ++ N                    ++R+   ++I  Y    
Sbjct: 295 YKEVMVFVENLVEHLVRAVNHDNTSLVYSYWKHGPQEVDFKAPWIRMTMKESIATYAGID 354

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKI 317
            D+ +   +  + +         F+  
Sbjct: 355 VDVHSDQKLKEILKKKTTFPETAFATA 381



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 10/124 (8%)

Query: 452 IDFAHNPFTMPQGGME---SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS----EVM 504
           +   H+    P        +L+  D   +   +++  C G E+ +     +      E++
Sbjct: 399 LIAPHHITDHPVETTPLCKTLRSGDTAFV--ERFESFCLGKELCNAYSELNDPIRQRELL 456

Query: 505 LQAFSNVGISKE-VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            Q  +   +  +            A   GMPP GG   G+DR+VM+L  A ++R+V  FP
Sbjct: 457 EQQHTKKELLPDSECHPIDEEFLEALCQGMPPAGGFGIGVDRLVMILTNAASIRDVLYFP 516

Query: 564 MSQN 567
           + + 
Sbjct: 517 VMRR 520


>gi|317123807|ref|YP_004097919.1| aspartyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315587895|gb|ADU47192.1| aspartyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 451

 Score =  146 bits (369), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 102/260 (39%), Gaps = 14/260 (5%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           DL     GS   L+GWVHR R    + F+ +RD  G+ QVV         +A  V  E V
Sbjct: 19  DLAALPDGSPAVLAGWVHRRRSLASVTFVIVRDRSGLAQVVVKDSDVLVGLAN-VPEETV 77

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSV--AEELPLPVFGEREYPESIRFKY 128
           + + G V+   A         G  EL    I  L+   A                    +
Sbjct: 78  VEVSGRVVHNPA-------APGGAELVDPTIVPLTEPAAPPPVELWRPTFGAGLPTHLDH 130

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             + LR           +  +   R  +   +F E +TP L  ++ E   +        +
Sbjct: 131 AAVTLRHPRHRAAWEVASASMRGFRSALTGLDFTEIATPKLVGTATESGANVFEVDYFGR 190

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQD 247
            ++ A  Q+PQ YKQ+L    F+R F++ P FR E   + R   ++  LD E+ F+ +  
Sbjct: 191 PAYLA--QSPQLYKQML-VGVFERVFEVGPVFRAEPHDTVRHLAQYTSLDAELGFIRDHR 247

Query: 248 DILNTMENVLRGVFEEFSNG 267
           D+L  +   L G+ E     
Sbjct: 248 DVLAVLRAALAGMVEAVGTY 267



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/136 (32%), Positives = 57/136 (41%), Gaps = 19/136 (13%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM--ESLKGNDLLSIKA-FQYDLVCNGF 489
           EF  +  FP             A  PF     G       G++    +A   +D++  G 
Sbjct: 326 EFLAVEGFPM------------AKRPFYTAPEGYGRAGGAGSEPAPGQASNSFDVLFRGL 373

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+ +GG R H       A    G           G   AF  GMPPHGG A G++R V  
Sbjct: 374 ELTTGGQRLHRPSDYRAALERAGQDPAP----LAGYLAAFDHGMPPHGGFAIGLERWVAR 429

Query: 550 LLGAKNVREVSLFPMS 565
           L GA+NVREV+LFP  
Sbjct: 430 LNGAENVREVALFPRD 445


>gi|160879288|ref|YP_001558256.1| tRNA synthetase class II (D K and N) [Clostridium phytofermentans
           ISDg]
 gi|160427954|gb|ABX41517.1| tRNA synthetase class II (D K and N) [Clostridium phytofermentans
           ISDg]
          Length = 441

 Score =  146 bits (369), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 104/264 (39%), Gaps = 14/264 (5%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V L G ++++R   G  F+ +R    + Q + + + A F + +         ++   
Sbjct: 23  GKKVTLHGSIYKIRKMSGFAFVLLRTKRAVVQCIYSEEFATFALEE--------LVEEST 74

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER--EYPESIRFKYRFLDLRR 135
           +   AE I         EL    ++ILS   E    V   +  E        YR + LR 
Sbjct: 75  VKVEAEVILEERSKVGYELRLLSLKILSKPLEEAPVVIHNKLVEASIDTLLNYRPITLRN 134

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           +        +  I    R  +  + F E  +P +     EG  +    +   + ++ A  
Sbjct: 135 ERERAIFKLQEGIAGGFRKFLAEQKFTEIHSPKIVQMGAEGGANIFSLNYFGKEAYLA-- 192

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTME 254
           Q+PQ YKQ +M   F+R ++IAP FR E   + R   E+  +D EM ++E  ++I+    
Sbjct: 193 QSPQFYKQ-MMVGVFERVYEIAPVFRAEKHDTSRHLNEYTSVDFEMGYIESFEEIMQMES 251

Query: 255 NVLRGVFEEFSNGNTVSNNFLRIC 278
            +L+                L I 
Sbjct: 252 CMLKATLSYLKEYYQKELFLLNIS 275



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 52/139 (37%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           EF ++  +P             +  PF   +            + +   +DL+  G EI 
Sbjct: 327 EFVFVTHYP------------SSKRPFYAMED--------PKNTEETLSFDLLFRGLEIT 366

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H  +  +      G++       F       + GMPPHGG+  G++R    L  
Sbjct: 367 TGGQRIHDFKEQVDKLLKRGMNV----EDFQSYLMMHRYGMPPHGGLGLGLERFTSKLCN 422

Query: 553 AKNVREVSLFPMSQNFCDL 571
             NVR  +LFP   N    
Sbjct: 423 QNNVRYATLFPRDINRLQP 441


>gi|156555390|ref|XP_001605382.1| PREDICTED: similar to ENSANGP00000013871 [Nasonia vitripennis]
          Length = 468

 Score =  146 bits (369), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 67/334 (20%), Positives = 119/334 (35%), Gaps = 52/334 (15%)

Query: 3   RYRTHSCGDL----GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           R R H+   +       +VG   ++ GWV  +R     IFLD+ D      +        
Sbjct: 18  RRRAHNYATIYESNDSKNVGKKAKVQGWVKALRKMKDNIFLDLNDGTSSQPLQVVLKKGM 77

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
               +++     + ++G +              G+ EL   KI+I+   +    P    +
Sbjct: 78  --KPENLSYGCSMTVEGEITVAP---------NGRAELQVDKIDIIGKCDLEGYPFLPRK 126

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
           +Y E    +Y  L  R       +  R    N++R       FI   TPILT++  EGA 
Sbjct: 127 QYSEDYIRRYLHLRPRTKAFSSTMRLRDLATNAIRDHFRDRGFINIHTPILTSNDCEGAG 186

Query: 179 DFLVP--------------------SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
           +  +                     +  N  +F  L  + Q + +   A    + +  +P
Sbjct: 187 EVFIIQPNSQELVQAMKTEGVDVESTYFNSKAF--LTVSGQLHLEAC-ARALSKVYNFSP 243

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGV-------------FEEF 264
            FR E+ +S     EFY ++ EM+F     D+    E +++ V               E 
Sbjct: 244 AFRAENTKSRLHLSEFYMIEAEMAFIASLKDLATEAELLVKSVTFSLIEKGSSDLQVLEA 303

Query: 265 SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
                ++ +F  I Y +A+     +   L  PI 
Sbjct: 304 PEPTWLNKDFGYITYTEALDILDKNSDRLTFPIK 337



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 31/156 (19%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
                EL +++       ++ ++P                PF M +   +          
Sbjct: 342 LAKEHELFLVHHLGDVPVFVTEWP------------VNSKPFYMKECEDD--------KS 381

Query: 478 KAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
           K    DL+    G  I      ++ S++  +    + +                + G  P
Sbjct: 382 KVQAMDLLAPTVGELIGGSVREDNYSKLKSKIPPGLNL---------DWYLELRKFGNVP 432

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             G   G +R + L+ G  N+++V  FP   + C L
Sbjct: 433 TAGFGMGFERYLQLISGVPNIKDVIPFPRWPHNCSL 468


>gi|282853230|ref|ZP_06262567.1| lysine--tRNA ligase [Propionibacterium acnes J139]
 gi|282582683|gb|EFB88063.1| lysine--tRNA ligase [Propionibacterium acnes J139]
          Length = 510

 Score =  146 bits (369), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 109/291 (37%), Gaps = 14/291 (4%)

Query: 2   HRYRTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV--VANPDS 56
            +Y T   G+L +    +    V + G V  VR  G + F  ++D +  T          
Sbjct: 50  QKY-TDDTGELTLAPGEETTDEVTVGGRVVFVRNTGKLCFASLQDGFTETSNGERLQIML 108

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           +  E+     + W   +D L               G++ + A +  + S A      +  
Sbjct: 109 SKAEVGDESLAAWKSDVD-LGDHVWVRGRVVVSRRGELSIMAAEWRLASKALRPLPTL-- 165

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSP 174
            +E  E  R + R+ DL      + +V+ R  I  ++R  +    F+E  TPIL      
Sbjct: 166 HKELSEETRVRRRYADLVVREESRQMVRTRALITRAVRRALDERGFLEIETPILQLVHGG 225

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F            +L  A + Y +  M  G DR +++   FR+E   S     EF
Sbjct: 226 AAARPFNTHLNAFDIDM-SLRIALELYLKRAMVGGTDRVYEMGRVFRNEGIDSS-HSAEF 283

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             L+  MS+  Q  I   +++++  V +   + + +      I  D   R 
Sbjct: 284 SMLEAYMSWGNQFTIAEVIKDIIMAVADAL-DVHQIETPKGTIDLDGQWRW 333



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 28/157 (17%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             A      +  EL  +        ++ D+P        + +   H              
Sbjct: 372 WEAGKVVMELFGEL--VEPGLINPTFVCDYP-----AIAQPLARPHR------------- 411

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLY 526
            +D   ++A  +DL+  G E  +G        +  +  +   ++                
Sbjct: 412 -DDPRMVEA--WDLIIGGMERGTGFSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFL 468

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + G PP GG+  G+DR+VML   A  +RE  LFP
Sbjct: 469 EALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFP 504


>gi|222095813|ref|YP_002529870.1| aspartyl-tRNA synthetase [Bacillus cereus Q1]
 gi|221239871|gb|ACM12581.1| aspartyl-trna synthetase [Bacillus cereus Q1]
          Length = 385

 Score =  146 bits (369), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 4/187 (2%)

Query: 93  QIELSAQKIEILSVAEELPLPVFGERE-YPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
            IE+ A +++IL+ AE LP  +  ++           R L LR + +      ++  ++S
Sbjct: 35  GIEVLAHEVKILNGAEPLPFEINKKKLQVGLDQLLNERVLSLRHERIAAIFKVKSTFVHS 94

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
               +   +F    TP + +   EG  +        + ++ A  Q+PQ YKQ+++A G +
Sbjct: 95  FSEFLAENDFTRIFTPKIVSQGAEGGANVFKLPYFQKEAYLA--QSPQFYKQMMVAGGLE 152

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTV 270
           R F+IAP +R E   S R   E+  LD+E+ F+ +  +++    +VL+ +F++ +     
Sbjct: 153 RVFEIAPVYRAEHHNSSRHLNEYISLDVEIGFINDFHEVMQLETDVLQYMFQQVAKNCEK 212

Query: 271 SNNFLRI 277
               L+I
Sbjct: 213 ELQLLQI 219



 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP     S+  
Sbjct: 250 GDLDTEGEKLLGKYVKETYKSEFVFITHYP-----------KEARPMYTMPNNENPSITD 298

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+      ++F      F+ 
Sbjct: 299 S---------FDLLYKGLEITSGAQRIHNYEMLLASFKEKGLHP----DKFQSYLNTFRY 345

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 346 GCPPHGGFGIGLERVVCKLLELTNVREASAFPRD 379


>gi|160878794|ref|YP_001557762.1| aspartyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160427460|gb|ABX41023.1| aspartyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 445

 Score =  146 bits (369), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 105/258 (40%), Gaps = 16/258 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V L G+VH VR      FL IR   GI Q          ++  S++       +G+ +
Sbjct: 26  KSVVLRGFVHTVRDMSEFSFLVIRTFEGIIQ-CVTSTEVTKDVVASLK-------EGMTV 77

Query: 79  SRSAETINANIITGQIELSAQKIEILSV-AEELPLP---VFGEREYPESIRFKYRFLDLR 134
               E           E+   ++ ILS  A++  +P      +       +   R + LR
Sbjct: 78  EVQGEVHEELRAPNGYEIILTRLLILSEPAKDSTMPLPISKWKLNTSLEAKLSLRPIALR 137

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
                     +  I+   R  + +E+F E  TP + A + EG  +        + +F A 
Sbjct: 138 NIRERAIFKIQEGIVRGFRDFLFSEHFTEVRTPKIVAGNAEGGANVFKLEYFGKKAFLA- 196

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTM 253
            Q+PQ YKQ  M   +DR F+ AP FR E   + R   E+  LD EM +++  +DI+N  
Sbjct: 197 -QSPQFYKQ-TMVGVYDRVFEAAPVFRAEKHNTTRHLNEYTSLDFEMGYIDSFEDIMNME 254

Query: 254 ENVLRGVFEEFSNGNTVS 271
             +L  +FE  S      
Sbjct: 255 TAMLTFIFELLSKDYKKE 272



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 55/139 (39%), Gaps = 24/139 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +F ++  +P                PF            +         +DL+  G EI 
Sbjct: 331 DFVFVTHYP------------SKKRPFYAM--------DDPSDKRFTLSFDLLFKGMEIT 370

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           +GG R H  E  +    + G++       F       + GMPPHGG+  G++R+ M LL 
Sbjct: 371 TGGQRIHNYEEQVAKMKDRGMNI----EDFEHYLMIHKHGMPPHGGLGIGLERLTMRLLE 426

Query: 553 AKNVREVSLFPMSQNFCDL 571
             NVRE SLFP   +  + 
Sbjct: 427 EANVRETSLFPRDVSRLEP 445


>gi|83767852|dbj|BAE57991.1| unnamed protein product [Aspergillus oryzae]
          Length = 531

 Score =  146 bits (369), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 75/320 (23%), Positives = 132/320 (41%), Gaps = 24/320 (7%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           G +G + +   +RL G +   R  G  +IF DI  +    QV+ N         ++ +  
Sbjct: 73  GQVGSTLLSFVLRLVGRIRTYRLAGSKLIFFDIVQNGHKVQVMCNLRQLPGITPEAFKKL 132

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVA-EELPLPVFGEREYPESIRF 126
           + L   G   S +          G++ + A ++ ++LS    ++PL        P     
Sbjct: 133 YRLLRRGDAFSVTGRPH--RTGRGELTVVATELPQLLSPCLHDVPLDAKEHENSPYP--- 187

Query: 127 KYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
             R +  L   T    I  R+ II  +R   +  +F+E +TPI+ + +    AR F   +
Sbjct: 188 --RHVQFLADQTTTDIIKARSAIIQYLRQFFLDRSFMEVNTPIVNSIAGGAIARPFYTSA 245

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                   +L  AP+ + + L+  GFDR F+I P FR+E       P EF   +   ++ 
Sbjct: 246 TEFPDRQLSLRIAPELWLKRLVVGGFDRVFEIGPSFRNEGIDKTHNP-EFTTCEFYHAYA 304

Query: 245 EQDDILNTMENVLRGVFEEFSNGN----------TVSNNFLRICYDDAI-RRYGTDKPDL 293
             +D+L+  E++L G+ +   + N            S  F RI +   I  + G   PDL
Sbjct: 305 NLEDLLSMTESLLSGMAQHIRDTNKDGTLKPTEVDFSTPFRRIDFLTGIEEKIGRKLPDL 364

Query: 294 RNPIIMHNVTEHFVHSEFRV 313
            +P  +  V + F      +
Sbjct: 365 TSPDAVAQVKQLFKDLSLEI 384



 Score = 68.2 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG---GLYRAFQCGMPP 535
           A + +L   G E+ +     +      + F +     +  +           A + G+P 
Sbjct: 436 AARGELFIEGKEVVNTYEEENSPSEQRRKFEDQVRYSKDADESSEIDESYLEALEWGLPA 495

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLF 562
            GG   GIDR+ ML  GAK + +V  F
Sbjct: 496 TGGWGCGIDRLCMLFTGAKRIADVLPF 522


>gi|332024809|gb|EGI64997.1| Putative asparaginyl-tRNA synthetase, mitochondrial [Acromyrmex
           echinatior]
          Length = 470

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 62/372 (16%), Positives = 121/372 (32%), Gaps = 63/372 (16%)

Query: 7   HSCGDL----GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           H C  +        +G   ++ GWV  +R     +F+DI D      +            
Sbjct: 22  HKCSSILDTTSKEAIGKPAKVQGWVRALRKMKDTVFVDISDGSTCKMLQVVVPKVI--KP 79

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREY 120
             +R    + ++G +              G+ EL A ++ ++      E   P    + Y
Sbjct: 80  DDLRYGSSISVEGELFLAP---------NGKTELRATEVHVIGACNVLEDGYPFAPRKTY 130

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
                 +Y  L  R       +  R      +   +    F+   TP+LT++  EGA + 
Sbjct: 131 DPEYIRQYLHLRPRTRGFSSLLRLRDLATTMITDHLRDRGFLSVHTPMLTSNDCEGAGEV 190

Query: 181 LVPS--------------------RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
            +                        +  +F A      Q     +A    + +   P F
Sbjct: 191 FLVKPQSKEILKSMKKEGQSENEIYFDTIAFLA---VSGQLHLEAVARALTKVYTFGPTF 247

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDIL---------NTMENVLRGVFEEFSNGN--- 268
           R E+ +S     EFY L++E++F+ + + L           +E ++     +  + N   
Sbjct: 248 RAENSKSRLHLSEFYMLEVEIAFITRIEELMEEVELLVKRVIERMIEKGASDLHSINAPE 307

Query: 269 --TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN---------VTEHFVHSEFRVFSKI 317
              ++  F+R+ Y+DA          L+ PI             + +H       V +  
Sbjct: 308 LQWLNKTFVRLTYEDAFNVLNNHANRLQQPIKYGEALSKEHELFLVQHNDGVPVFVINWP 367

Query: 318 LSVNPGYEVWAI 329
             + P Y    +
Sbjct: 368 KVIKPFYMKECV 379



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 51/150 (34%), Gaps = 27/150 (18%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            EL ++  N     +++++P                PF M +         D+  + A  
Sbjct: 348 HELFLVQHNDGVPVFVINWP------------KVIKPFYMKECVD------DVSKVAALD 389

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV +  E+  G +R      +       G                 + G  P GG   
Sbjct: 390 L-LVPDVGELVGGSMREDDYGKLELKLPPTG--------NLSWYLDLRKYGNVPTGGFGL 440

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G DR +  +LG  N+++   FP   + C+L
Sbjct: 441 GFDRFLQCVLGIGNIKDTVPFPRWPHNCNL 470


>gi|164428694|ref|XP_964757.2| hypothetical protein NCU00931 [Neurospora crassa OR74A]
 gi|157072244|gb|EAA35521.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 543

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 104/252 (41%), Gaps = 14/252 (5%)

Query: 15  SDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQ--VVANPDSACFEIAKSVRSEWVL 71
                 V + G V  VR  G  ++FLD++  +   Q     N            ++   L
Sbjct: 17  KHADEEVIIHGRVQSVRRAGNKLMFLDLKGEFEHVQGLCNFNKLQVTGVELGEFKALAKL 76

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRF 130
              G ++S +         TG++ + A ++ E+L+ A          +   E +R ++R 
Sbjct: 77  LNRGDIVSITGRA--TKTPTGELSIEATRLPELLTPALAPLPF----KLEDEEVRIQHRH 130

Query: 131 LD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP-SRVN 187
           +D L        +  R+ +I  +R       F+E  TPIL  ++    AR F V  S  +
Sbjct: 131 IDMLVNRKTIDTLRLRSHLIKYLRDFFHERGFLEFQTPILAENASGATARPFTVTASETS 190

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
                A+  AP+ + + L+  G D+ F++ P FR+E       P EF   +   ++   D
Sbjct: 191 VNKNLAMRIAPELWLKRLVVGGVDKVFELGPAFRNEGIDQTHNP-EFSMCEFYNAYANLD 249

Query: 248 DILNTMENVLRG 259
           D++   E ++ G
Sbjct: 250 DLITLTEELICG 261



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 47/136 (34%), Gaps = 16/136 (11%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F E     K +   H+P  M     +S          + + +L  NG E+A+     +  
Sbjct: 350 FLEPYSLTKPLFITHHPVCMS-PLSKSFVCPKTGQHVSARTELFINGKELANMYEEENDP 408

Query: 502 EVMLQAFSN---------------VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
               Q F +                    E          +A + G+PP GG   GI+R+
Sbjct: 409 ASQRQKFVDQLNAAKREASLAPGVYNDEGESAMEVDESYVQALESGLPPTGGWGCGIERM 468

Query: 547 VMLLLGAKNVREVSLF 562
           VML  G K + +   F
Sbjct: 469 VMLFSGTKRISDCLSF 484


>gi|296818309|ref|XP_002849491.1| lysyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238839944|gb|EEQ29606.1| lysyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 562

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 69/329 (20%), Positives = 122/329 (37%), Gaps = 35/329 (10%)

Query: 8   SCGDLGVSDVG---------SFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSA 57
           +C +      G           V L G +   R  G  ++F D+       QV+ N    
Sbjct: 81  TCAEFRSKYDGIRPDETVEEDTVVLYGRIRSQRTAGKKLVFFDLVHGGHKVQVLCNQRVM 140

Query: 58  CFEIA--KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPV 114
                  +  +  ++L   G   S + +        G++ +    +  ++S         
Sbjct: 141 GEAGIPPEKFKEFYLLLRRGDSFSVTGKPH--RTGRGELTIKTTGLPRLISPCLHDVPVH 198

Query: 115 FGEREYPESIRFKYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
             E E         R ++L    +    +  R+ I +SMR      +F+E STPIL + S
Sbjct: 199 QKELEISPY----DRHVELLSSPSASNVLRARSLITHSMRNFFAERDFMEVSTPILASKS 254

Query: 174 PEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
               A+ F+  +        +L  AP+ + + L+  GFDR F+I P FR+E       P 
Sbjct: 255 GGAIAQPFVTSATEFPERQLSLRIAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP- 313

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT------------VSNNFLRICYD 280
           EF   +   +F + + ++ T E++L  +  E    N              +  + RI + 
Sbjct: 314 EFTTCEFYQAFADLESLIETTESLLSTLAPEIQRLNEKLNNSLNPTPVSFTGPYRRIDFI 373

Query: 281 DAIRR-YGTDKPDLRNPIIMHNVTEHFVH 308
            AI    G   PDL+    +  V + F  
Sbjct: 374 PAIEEAIGRKLPDLQAEDALLQVNQIFAD 402



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 3/108 (2%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG--IS 514
           +P  M     +S +  +   + + + +L   G EI +     +      + F        
Sbjct: 438 HPECMS-PLSKSYRHPESGQVVSARAELFVEGKEIMNMYEEENSPFEQRRKFQQQLSFRD 496

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            E       G  +  + G+PP GG   GIDR+ ML  GA+ + +V  F
Sbjct: 497 PENAGELDEGYLQTLEWGLPPTGGWGCGIDRLCMLFTGARRISDVLAF 544


>gi|269115224|ref|YP_003302987.1| Asparaginyl-tRNA-synthetase [Mycoplasma hominis]
 gi|268322849|emb|CAX37584.1| Asparaginyl-tRNA-synthetase [Mycoplasma hominis ATCC 23114]
          Length = 448

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/350 (16%), Positives = 115/350 (32%), Gaps = 28/350 (8%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSE 68
            +        + + GW+   R +  I F+ I D   I   Q+V   D A  +    +   
Sbjct: 9   QISQLQENVELTIEGWIISNRGNDKIRFITINDGSTIANMQLVIKGDLASKKEISEIAVG 68

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G +                 ELS  K   L +          ++E       + 
Sbjct: 69  SAVSVIGKLHLTPEAMQP-------FELSVSKF--LYINNPQEDFPIQKKETSLDFLREI 119

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R       ++ R  ++  +     ++ F+  S+PI+T++  EGA + L+    ++
Sbjct: 120 PQLRHRTSLFRAIMLIRNSLMFEIHKYFQSKGFLNLSSPIITSNDGEGAGETLLVDDESK 179

Query: 189 GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             F+   A      Q      A GF + +   P FR E+  + R   EF+ ++ E++F +
Sbjct: 180 DYFFKQKAFLGVTGQLHAESYAEGFKKVYTFGPTFRAENSHTSRHLAEFWMMEPEVAFCD 239

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFL--------------RICYDDAIRRYGTDKP 291
              I+   +++L+ V             +L               I     I  Y     
Sbjct: 240 LKGIIEITDDMLKNVIANTLKNCPEEMKYLDSLQNNKLIESLNNFINKKLTIIEYKDVVE 299

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
           +L+N +      + F   +     +        +            +AF 
Sbjct: 300 NLKNYVDKFEEKDIFFGMDLASEHEKFLAENIVKGPVAVINYPKDIKAFY 349



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 6/94 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A  +DL+  G  E+  G  R +  + ++   + + I+    +          +
Sbjct: 353 NDDGKTVA-AFDLLVPGIGELVGGSQRENRYQKLVDRINELKIT----QETLQWYLDLRR 407

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            G  P  G   G +R+VM + G  N+R+V  FP 
Sbjct: 408 FGYAPSSGFGLGFERLVMYVTGTSNIRDVIPFPR 441


>gi|313835252|gb|EFS72966.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314928489|gb|EFS92320.1| lysyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314970100|gb|EFT14198.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
          Length = 494

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/278 (20%), Positives = 102/278 (36%), Gaps = 23/278 (8%)

Query: 5   RTHSCGDLGV--------------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           R H+   +                 +    V + G V  VR  G + F  ++D +  T  
Sbjct: 25  RDHTLAQIRQKYTDGNGKLILAPGEETADEVTVGGRVVFVRNTGKLCFASLQDGFTETSN 84

Query: 51  --VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
                   +  E+     + W   +D   +          +++ + ELS    E    A+
Sbjct: 85  GERLQVMLSKAEVGDESLAAWKSDVD---LGDHVWVRGRVVVSRRGELSIMAAEWRMAAK 141

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTP 167
            L       +E  E  R + R++DL      + +V+ R  I  ++R  +    F+E  TP
Sbjct: 142 ALRPLPTLHKELSEETRVRRRYVDLVVREESRQMVRTRAAITRAVRRALDERGFLEIETP 201

Query: 168 ILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           IL        AR F            +L  A + Y +  M  G DR +++   FR+E   
Sbjct: 202 ILQLVHGGAAARPFNTHLNAFDLDM-SLRIALELYLKRAMVGGTDRVYEMGRVFRNEGID 260

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           S     EF  L+  MS+  Q  I   +++++  V +  
Sbjct: 261 SS-HSAEFSMLEAYMSWGNQFTIAEVIKDIIMAVADAL 297



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 28/157 (17%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             A      +  EL  +  +     ++ D+P        + +   H              
Sbjct: 356 WEAGKVVMELFGEL--VEPDLINPTFVCDYP-----AIAQPLARPHR------------- 395

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLY 526
            +D   ++A  +DL+  G E  +G        +  +  +   ++                
Sbjct: 396 -DDPRMVEA--WDLIIGGMERGTGFSELVDPVIQREVLTKQSLAAAAGDLEAMQLDEDFL 452

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + G PP GG+  G+DR+VML   A  +RE  LFP
Sbjct: 453 EALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFP 488


>gi|38567283|emb|CAE76572.1| related to lysyl-tRNA synthetase (lysine--tRNA ligase) [Neurospora
           crassa]
          Length = 594

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 104/252 (41%), Gaps = 14/252 (5%)

Query: 15  SDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQ--VVANPDSACFEIAKSVRSEWVL 71
                 V + G V  VR  G  ++FLD++  +   Q     N            ++   L
Sbjct: 68  KHADEEVIIHGRVQSVRRAGNKLMFLDLKGEFEHVQGLCNFNKLQVTGVELGEFKALAKL 127

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRF 130
              G ++S +         TG++ + A ++ E+L+ A          +   E +R ++R 
Sbjct: 128 LNRGDIVSITGRA--TKTPTGELSIEATRLPELLTPALAPLPF----KLEDEEVRIQHRH 181

Query: 131 LD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVP-SRVN 187
           +D L        +  R+ +I  +R       F+E  TPIL  ++    AR F V  S  +
Sbjct: 182 IDMLVNRKTIDTLRLRSHLIKYLRDFFHERGFLEFQTPILAENASGATARPFTVTASETS 241

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
                A+  AP+ + + L+  G D+ F++ P FR+E       P EF   +   ++   D
Sbjct: 242 VNKNLAMRIAPELWLKRLVVGGVDKVFELGPAFRNEGIDQTHNP-EFSMCEFYNAYANLD 300

Query: 248 DILNTMENVLRG 259
           D++   E ++ G
Sbjct: 301 DLITLTEELICG 312



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 47/136 (34%), Gaps = 16/136 (11%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F E     K +   H+P  M     +S          + + +L  NG E+A+     +  
Sbjct: 401 FLEPYSLTKPLFITHHPVCMS-PLSKSFVCPKTGQHVSARTELFINGKELANMYEEENDP 459

Query: 502 EVMLQAFSN---------------VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
               Q F +                    E          +A + G+PP GG   GI+R+
Sbjct: 460 ASQRQKFVDQLNAAKREASLAPGVYNDEGESAMEVDESYVQALESGLPPTGGWGCGIERM 519

Query: 547 VMLLLGAKNVREVSLF 562
           VML  G K + +   F
Sbjct: 520 VMLFSGTKRISDCLSF 535


>gi|116668733|ref|YP_829666.1| lysyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116608842|gb|ABK01566.1| lysyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 510

 Score =  146 bits (368), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 56/267 (20%), Positives = 102/267 (38%), Gaps = 22/267 (8%)

Query: 5   RTHSCGDLGVSDV--------GSFVRLSGWVHRVRPHGGIIFLDIR----DHYGITQVVA 52
           RTHS  ++             G  V ++G +  +R  G + F  ++    D  G      
Sbjct: 46  RTHSLSEIREKYAHLEADETTGDIVGVTGRIVFIRNTGKLCFATLQEGGTDGKGTRLQAM 105

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
              +   E  +S+     L   G  +    E I++    G++ + A    + S A     
Sbjct: 106 LSLANVGE--ESLAEWKSLVDLGDHVFIKGEVISSR--RGELSVMADSWAMASKALRPLP 161

Query: 113 PVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
            +       E  R + R++DL  RD   + +  R  I  S+R  +   N++E  TP+L  
Sbjct: 162 VLHAG--LNEETRVRQRYVDLMVRDEAREMVYTRAAITRSIRESLHRRNYVEVETPMLQL 219

Query: 172 SSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                 AR F             L  A + Y +  +  G DR + +   FR+E   S   
Sbjct: 220 VHGGALARPFETHMNAFDQKM-TLRIATELYLKRAVVGGIDRVYDMGRVFRNEGVDSTHS 278

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVL 257
           P EF  L+   ++ +Q  + + ++ ++
Sbjct: 279 P-EFTTLECYEAWADQFVMADRIKEII 304



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 55/151 (36%), Gaps = 28/151 (18%)

Query: 419 HIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
            +A EL   I+        ++ D+P        + +   H               ND   
Sbjct: 375 KLAVELFGEIVEPTLLNPTFVYDYP-----PSAQPLARQHR--------------NDDRL 415

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCG 532
           I+A  +DL+  G E  +         +  +  +   +                 RA + G
Sbjct: 416 IEA--WDLIIGGMERGTAFSELIDPVIQRERLTEQSMHAAAGDVEAMQLDEDFLRALEYG 473

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            PP GGI  GIDR+VML  GA  +RE  LFP
Sbjct: 474 APPMGGIGLGIDRLVMLFTGAG-IRETILFP 503


>gi|289620070|emb|CBI53514.1| unnamed protein product [Sordaria macrospora]
          Length = 580

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 64/301 (21%), Positives = 116/301 (38%), Gaps = 25/301 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPDSACFEIAKSVRSEWVL 71
             S  G+ V++ G +HR+R      FL ++D YG    V+   D      A     E  L
Sbjct: 146 DESKKGTRVKVYGRIHRLRAQKHATFLTLKDGYGFLQCVLPAGDLTKNYDALLFAQETAL 205

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVA----EELPLPVFGEREYPESIRFK 127
            + G +    A     +      EL     ++L  A    E +   V  +++  ++    
Sbjct: 206 VLYGELKKLPAGATAPDGR----ELQVDYFKVLGHAPSDTEAITNKVSRDQDAWDAAMLD 261

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R L LR +     +  R  +  +         F + S P +  +  EG           
Sbjct: 262 NRHLVLRGENASALMKLREFVELAFVDTYRELEFRKVSPPAMVQTQVEGGSTLFKYDYYG 321

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + ++  L Q+ Q Y + ++AS   + + I   FR E   + R   E+  ++ E+ F+E  
Sbjct: 322 EEAY--LTQSSQLYLETVLAS-MGQVYCIEKSFRAEKSLTRRHLSEYTHVEAEIDFIEFS 378

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNN-------------FLRICYDDAIRRYGTDKPDLR 294
           D+L+ +E ++  V +   N  T +               FLR+ Y++AI       P + 
Sbjct: 379 DLLDHLEEIISKVVDRVLNDETAAGYLKVLNPEFKKPEKFLRMKYEEAIEWLNKQDPPIL 438

Query: 295 N 295
           N
Sbjct: 439 N 439



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                   F M +     L+  + + +      L+    EI  G +R    + +++A+  
Sbjct: 471 HFPVEIKAFYMKK-DPNDLRVTESVDV------LMPGVGEIVGGSMRMDDYDELIEAYKK 523

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +    +VR   L+P     C 
Sbjct: 524 NGIG----HEPYFWYTDQRKYGTSPHGGYGLGLERFLAWMANQHSVRTTCLYPRFMGRCK 579

Query: 571 L 571
            
Sbjct: 580 P 580


>gi|302666150|ref|XP_003024677.1| aspartate-tRNA ligase, putative [Trichophyton verrucosum HKI 0517]
 gi|291188744|gb|EFE44066.1| aspartate-tRNA ligase, putative [Trichophyton verrucosum HKI 0517]
          Length = 947

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 65/306 (21%), Positives = 121/306 (39%), Gaps = 26/306 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDS-----ACFEIAKSV 65
           +     G  +     +H VR  G    FL  R      Q V + +           A+ +
Sbjct: 132 ITDEMKGQELIFRARLHVVRRMGAKFAFLVFRQQLHTLQGVLHTEPKLRSANMIYWAERI 191

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-------- 117
               +L + G + +         I   ++E+  +++ +    EE       E        
Sbjct: 192 PVGSILKVKGRLKTPDVPVFGTTIHNLELEI--EELHVAVRREEPVPFSVYEAELAGAHE 249

Query: 118 -------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                  ++ P+  R   R LDLR DT       ++ I    R  + A+NFIE  +P L 
Sbjct: 250 ERLEGVRQKIPDRTRLSNRILDLRTDTSQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQ 309

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           A++ E        +   + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R 
Sbjct: 310 AAATESGASVFGVNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRH 367

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             E+  LD+EM+  E   + L  +++VL+ +F+       +    ++  +      +  +
Sbjct: 368 LTEYTGLDIEMAIEEHYHEALEVLDSVLKSIFKTIYEKYRLEIEVIKHHFPSEDLVWLDE 427

Query: 290 KPDLRN 295
            P +  
Sbjct: 428 TPIISF 433



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 28/156 (17%)

Query: 415 DARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN 472
             R+ I   LG ++        +I+D           K      PF  MP    E     
Sbjct: 460 GTRDEI--RLGELVKEKFHTDYYILD-----------KFPATARPFYAMPHPDDERF--- 503

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                    +D+   G EI SGG R H  +++ +    VGI    +E         F+ G
Sbjct: 504 ------TLSFDIFVRGQEIVSGGQRIHHPDLLDKRMREVGIDPSTIEE----YMEGFKWG 553

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            PPH G   G++R++ML+L   N+R  SLF      
Sbjct: 554 APPHAGAGIGLERLLMLILKLGNIRLGSLFHRDPKS 589


>gi|229023724|ref|ZP_04180214.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228737570|gb|EEL88076.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1272]
          Length = 370

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 52/213 (24%), Positives = 101/213 (47%), Gaps = 11/213 (5%)

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPESIR 125
            E V+ I G ++  S   +        +E+ A +++IL+ AE LP  +  ++        
Sbjct: 1   MESVVQIVGQIVETSKTEL-------GVEVLAHEVKILNGAEPLPFEINKKKLQVGLDQL 53

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR + +      ++ ++ S    +I  +F    TP + +   EG  +      
Sbjct: 54  LNERVLSLRHERIAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQGAEGGANVFKLPY 113

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV- 244
             + ++ A  Q+PQ YKQ+++A G +R F++AP +R E   S R   E+  LD+E+ F+ 
Sbjct: 114 FQKEAYLA--QSPQFYKQMMVAGGLERVFEVAPVYRAEHHNSSRHLNEYISLDVELGFIH 171

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           +  +++    +VLR +F++ +         L+I
Sbjct: 172 DFYEVMQLETDVLRYMFQQVAKICEKELQLLQI 204



 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 26/154 (16%)

Query: 414 ADARNHIAQELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
            D      + LG      +  EF +I  +P             A   +TMP    E++  
Sbjct: 235 GDLDTEGEKLLGKYVKETYNSEFVFITHYP-----------KEARPMYTMPNKENEAVTD 283

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +DL+  G EI SG  R H  E++L +F   G+       +F      F+ 
Sbjct: 284 S---------FDLLYKGLEITSGAQRIHNHEMLLASFKEKGLHP----EKFQSYLNTFRY 330

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G PPHGG   G++R+V  LL   NVRE S FP  
Sbjct: 331 GCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 364


>gi|121710664|ref|XP_001272948.1| aspartyl-tRNA synthetase Dps1, putative [Aspergillus clavatus NRRL
           1]
 gi|119401098|gb|EAW11522.1| aspartyl-tRNA synthetase Dps1, putative [Aspergillus clavatus NRRL
           1]
          Length = 556

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/298 (20%), Positives = 109/298 (36%), Gaps = 30/298 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFEIAK---SV 65
           +LG       V +   V   R     + FL + +    +  V+A  +    ++ K    +
Sbjct: 88  ELGEEFYEQEVTVVARVDNARVQSAKLAFLMLRQQGQKVQAVIAAAEPISRQMIKYTGGL 147

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--- 122
               ++ + G+V        +A I    +E+  +K+ ++S A +       + E P    
Sbjct: 148 NVNSIVQVTGIVKKPEIPISSATISN--LEIHIKKVYMISEAAQQLPMQVKDAERPPPET 205

Query: 123 -----------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
                              R   R LDL+ +T        + +       MI        
Sbjct: 206 TEEGNLVDAEGTPIVTLKTRLDNRVLDLQTETSQAITWISSGVAELFAEYMIKSGSRWIF 265

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP L  ++ EG  +        +  + A  Q+PQ YKQ+ +A   +  F+IAP FR ED 
Sbjct: 266 TPKLVGAATEGGSNVFEVKYFKKSGYLA--QSPQLYKQMCIAGDMENVFEIAPVFRAEDS 323

Query: 226 RSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
            + R   EF  LD E +F     ++L   E++L  +  +           ++  Y  A
Sbjct: 324 NTHRHLTEFSGLDFEKTFRGHYHEVLEFAEDLLVFILTQLKERYQDKIAIIQKSYPKA 381



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/188 (26%), Positives = 75/188 (39%), Gaps = 25/188 (13%)

Query: 384 TEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-F 440
            +   +RL+  DG +    AG D  +   F  D    + ++LG I  + ++  + ++D F
Sbjct: 388 KDGKALRLNYMDGVALLKEAGVDVSEQERFENDLTTAMEKQLGQIIRDKYDTDFYVLDKF 447

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P             A  PF             D     +  YD    G EI SG  R + 
Sbjct: 448 PM------------AVRPFYTKAC------PQDPN--FSNSYDFFMRGEEIMSGAQRIND 487

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            + + ++    G+  +     F     AF+ G PPH G   G++RIVM  LG  NVR  S
Sbjct: 488 IKELEESMIAKGLDPK--HEGFEDYLAAFRQGCPPHAGGGLGLNRIVMFFLGLPNVRLAS 545

Query: 561 LFPMSQNF 568
           LFP     
Sbjct: 546 LFPRDPQR 553


>gi|308235835|ref|ZP_07666572.1| lysyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311114421|ref|YP_003985642.1| lysyl-tRNA synthetase [Gardnerella vaginalis ATCC 14019]
 gi|310945915|gb|ADP38619.1| lysyl-tRNA synthetase [Gardnerella vaginalis ATCC 14019]
          Length = 557

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 104/247 (42%), Gaps = 12/247 (4%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPDSACFEIAKSVRSEWVLCI 73
            +  + V ++G V  +R  GG+ F+ +    G   Q + +      E  KS +    L  
Sbjct: 115 EETDTEVGIAGRVLFLRNAGGLCFVKLAAGDGTTIQAMVSKKEIGEESIKSFKQMVDL-- 172

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +      I++   TG++ + A +  I + A +    +   +E  +  R +  ++ +
Sbjct: 173 -GDHLYVRGRVISSK--TGELSVFATEWAIAAKALQPLPAL--HKELSDDTRTRKPYIGM 227

Query: 134 RRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             D  +   + +R+  + S+R    + +F+E  TP+L T      AR F           
Sbjct: 228 IADEKIRDMVRRRSHAVASLRRTFDSHDFLEVETPMLQTVHGGAAARPFTTHMNAFDIDL 287

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           Y L  AP+ + +  +  G DR F+I   FR+E   +   P EF  L+   ++   D I  
Sbjct: 288 Y-LRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAP-EFTMLEAYQAYGTYDTIGA 345

Query: 252 TMENVLR 258
             + +++
Sbjct: 346 LTKELIQ 352



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 63/203 (31%), Gaps = 32/203 (15%)

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E   +   G +++ L    T    V       D       +             H+ +  
Sbjct: 377 EWKQITMYGSLSEALGEEITPETSVEHLGAIADKLGVERDEVENH----GKLVEHLWEHF 432

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                  +E  ++ DFP      E   +   H                        ++DL
Sbjct: 433 --YEDKLYEPTFVRDFPV-----ETSPLVKGHR----------------TKPGMVEKWDL 469

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIA 540
              GFE+A+G    +   V  + F               +       A   GMPP GG+ 
Sbjct: 470 YVRGFELATGYSELNDPVVQRERFVAQAKDALAGDVEAMDIDEDFIEALGVGMPPAGGMG 529

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            GIDR+++ L GA  +RE   FP
Sbjct: 530 MGIDRLLIALTGA-TIRETITFP 551


>gi|302500634|ref|XP_003012310.1| aspartate-tRNA ligase, putative [Arthroderma benhamiae CBS 112371]
 gi|291175868|gb|EFE31670.1| aspartate-tRNA ligase, putative [Arthroderma benhamiae CBS 112371]
          Length = 947

 Score =  145 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 65/306 (21%), Positives = 121/306 (39%), Gaps = 26/306 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDS-----ACFEIAKSV 65
           +     G  +     +H VR  G    FL  R      Q V + +           A+ +
Sbjct: 132 ITDEMKGQELIFRARLHVVRRMGAKFAFLVFRQQLHTLQGVLHTEPKLRSANMIYWAERI 191

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-------- 117
               +L + G + +         I   ++E+  +++ +    EE       E        
Sbjct: 192 PVGSILKVKGRLKTPDVPVFGTTIHNLELEI--EELHVAVRREEPVPFSVYEAELAGAHE 249

Query: 118 -------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                  ++ P+  R   R LDLR DT       ++ I    R  + A+NFIE  +P L 
Sbjct: 250 ERLEGVRQKIPDRTRLSNRILDLRTDTSQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQ 309

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           A++ E        +   + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R 
Sbjct: 310 AAATESGASVFGVNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRH 367

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             E+  LD+EM+  E   + L  +++VL+ +F+       +    ++  +      +  +
Sbjct: 368 LTEYTGLDIEMAIEEHYHEALEVLDSVLKSIFKTIYEKYRLEIEVIKHHFPSEDLVWLDE 427

Query: 290 KPDLRN 295
            P +  
Sbjct: 428 TPIISF 433



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 28/156 (17%)

Query: 415 DARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN 472
             R+ I   LG ++        +I+D           K      PF  MP    E     
Sbjct: 460 GTRDEI--RLGELVKEKFHTDYYILD-----------KFPATARPFYAMPHPDDERF--- 503

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                    +D+   G EI SGG R H  +++ +    VGI    +E         F+ G
Sbjct: 504 ------TLSFDIFVRGQEIVSGGQRIHHPDLLDKRMREVGIDPSTMEE----YMEGFKWG 553

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            PPH G   G++R++ML+L   N+R  SLF      
Sbjct: 554 APPHAGAGIGLERLLMLILKLGNIRLGSLFHRDPKS 589


>gi|302927399|ref|XP_003054489.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256735430|gb|EEU48776.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 530

 Score =  145 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 16/265 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV- 70
              D    + + G V   R  G  +IFLDI   +   QV+ N      +  +      + 
Sbjct: 12  NELDDTKDISICGRVRSKRVVGKNLIFLDIVSEFERLQVMINRSKCLLDQEERRVKFSLF 71

Query: 71  ---LCIDGLVMSRS---AETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPES 123
              + +   + + S      I      G++ + A+ + E+LS      +    E+     
Sbjct: 72  RNLIEVGDHIYAYSLAAVVGIPTRTKAGELTIEAKALPELLS----PTMEQIPEKLTDPK 127

Query: 124 IRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFL 181
            R + R +D L        +  R  I   MR  + ++ F+E  TPIL  ++    AR F+
Sbjct: 128 TRMQDRHVDMLVNRQAIDVLRLRAEITKHMRDHLHSKRFLEFQTPILAENAGGAVARPFV 187

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
             +   +    AL  AP+ + + L+  G DR F+I P FR+E   +   P EF   +   
Sbjct: 188 TRATEFKERDLALRIAPELWLKRLVIGGVDRVFEIGPAFRNEGVDATHNP-EFTMCEFYS 246

Query: 242 SFVEQDDILNTMENVLRGVFEEFSN 266
           ++   +D++N  E +L  + +   +
Sbjct: 247 AYSNLEDLINETEEILCSLAQHCQD 271



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 47/154 (30%), Gaps = 34/154 (22%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           + E     + I   ++P  M      S    +   + + + +L   G E+A+     +  
Sbjct: 351 YLEPMSFTEPILIMNHPACMSPLAK-SFLCPNTFQLVSARAELFIGGRELANMYEEENDP 409

Query: 502 EVMLQAFSNVGISKEVVE----------------------NRFGG-----------LYRA 528
           E   Q   +        +                        F               +A
Sbjct: 410 EAQKQKLLDHRNLVNTADGGVAIETPDTQEGEMSALEALDEPFEDEDGDAAPLDQSFVKA 469

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              G+PP GG   G++R+VML  GA  + +   F
Sbjct: 470 LDYGLPPTGGWGCGVERMVMLFSGANRISDCLSF 503


>gi|314922522|gb|EFS86353.1| lysyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
 gi|314965597|gb|EFT09696.1| lysyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
 gi|314982761|gb|EFT26853.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315091413|gb|EFT63389.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315094348|gb|EFT66324.1| lysyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315105074|gb|EFT77050.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|327329142|gb|EGE70902.1| lysine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 494

 Score =  145 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 109/291 (37%), Gaps = 14/291 (4%)

Query: 2   HRYRTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV--VANPDS 56
            +Y T   G+L +    +    V + G V  VR  G + F  ++D +  T          
Sbjct: 34  QKY-TDDTGELTLAPGEETTDEVTVGGRVVFVRNTGKLCFASLQDGFTETSNGERLQIML 92

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           +  E+     + W   +D L               G++ + A +  + S A      +  
Sbjct: 93  SKAEVGDESLAAWKSDVD-LGDHVWVRGRVVVSRRGELSIMAAEWRLASKALRPLPTL-- 149

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSP 174
            +E  E  R + R+ DL      + +V+ R  I  ++R  +    F+E  TPIL      
Sbjct: 150 HKELSEETRVRRRYADLVVREESRQMVRTRALITRAVRRALDERGFLEIETPILQLVHGG 209

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F            +L  A + Y +  M  G DR +++   FR+E   S     EF
Sbjct: 210 AAARPFNTHLNAFDIDM-SLRIALELYLKRAMVGGTDRVYEMGRVFRNEGIDSS-HSAEF 267

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             L+  MS+  Q  I   +++++  V +   + + +      I  D   R 
Sbjct: 268 SMLEAYMSWGNQFTIAEVIKDIIMAVADAL-DVHQIETPKGTIDLDGQWRW 317



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 28/157 (17%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             A      +  EL  +        ++ D+P        + +   H              
Sbjct: 356 WEAGKVVMELFGEL--VEPGLINPTFVCDYP-----AIAQPLARPHR------------- 395

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLY 526
            +D   ++A  +DL+  G E  +G        +  +  +   ++                
Sbjct: 396 -DDPRMVEA--WDLIIGGMERGTGFSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFL 452

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + G PP GG+  G+DR+VML   A  +RE  LFP
Sbjct: 453 EALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFP 488


>gi|300708164|ref|XP_002996267.1| hypothetical protein NCER_100652 [Nosema ceranae BRL01]
 gi|263511657|sp|C4V847|SYNC_NOSCE RecName: Full=Probable asparaginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|239605554|gb|EEQ82596.1| hypothetical protein NCER_100652 [Nosema ceranae BRL01]
          Length = 447

 Score =  145 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 65/331 (19%), Positives = 127/331 (38%), Gaps = 35/331 (10%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y++    ++  SD+   ++  GWV   R    I F D+                 +E   
Sbjct: 17  YKSIELSEISKSDMHKRIKTFGWVDCCRTGKSITFFDL-------TCQFKSIKCVYEKKI 69

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +     L I G +    ++  NA     + E+  +K+EI + A     P+   +E    
Sbjct: 70  DLTKCTSLTIYGTIQENKSKKENA-----EFEVLVEKLEIFNDAIAPSFPL--NKESSFD 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
              KY  L LR       +  R+ ++  +R      NFIE + P +  +  EG       
Sbjct: 123 TMMKYGHLALRNKQRGFFLKARSSLLKIIRDIFYEGNFIEITPPTIVQTQVEGGSTLFKL 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              ++ ++  L Q+ Q Y + +    + R + IA  +R E   + R   E+  ++ E++ 
Sbjct: 183 KYYDKDAY--LTQSSQLYLETVAPVAY-RAYCIASSYRAEKSNTTRHLSEYTHVEAELAN 239

Query: 244 VEQDDIL---------------NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY-- 286
           +E +D++               + + + ++ ++ E    N     F RI Y DAI+    
Sbjct: 240 IEFEDLINNIEHLVTESIKRFYDLLGDEIKDLYPEIKLQNVPKRPFKRIRYVDAIKFLND 299

Query: 287 -GTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
            G  K D  + ++  ++ +         F K
Sbjct: 300 EGVKKDDDTDFVVGDDIPDSREKIICERFGK 330



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 42/122 (34%), Gaps = 13/122 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                H PF M                    +DL+  G  EI  G +R      ++  F 
Sbjct: 338 HFLVEHKPFYMKLDSS--------NETCTESFDLLYPGIGEIVGGSMRLDNYNKLIDGFK 389

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G++       +       + G   HGG   G +R++M L+   N+   +L+P +   C
Sbjct: 390 REGLNP----EDYDWYLDMARFGPCSHGGYGLGFERLLMALMRYTNIEFATLYPRNTRRC 445

Query: 570 DL 571
             
Sbjct: 446 HP 447


>gi|255535963|ref|YP_003096334.1| asparaginyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255342159|gb|ACU08272.1| Asparaginyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 498

 Score =  145 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 93/274 (33%), Gaps = 27/274 (9%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE--IAKSVRSEWVLCIDGLVM 78
           + + GWV   R +    F+ + D   I  +    D   F+    K++ +   L I G V+
Sbjct: 37  ITVQGWVRAFRSNR---FIALNDGSTINNLQIVVDFEKFDEDTLKNISTAASLKIVGEVV 93

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                  +  II  +I +           EE    +   +++   I  +   L  R +  
Sbjct: 94  ESQGAGQSIEIIARKIIILGDNFT-----EERDKTILQPKKHSLEILREQAHLRFRTNLF 148

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                 R+ +  ++        F   +TPI+T +  EGA +    +  +           
Sbjct: 149 GSVFRVRSAVSFAIHQFFNKNQFFYMNTPIITGADAEGAGEMFSVTNFDINDLPKDENGE 208

Query: 199 QQYKQ-----------------LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
             Y Q                      G  R +   P FR E+  + R   EF+ ++ E+
Sbjct: 209 IDYSQDFFGKKTNLTVSGQLNVETAMMGLGRVYTFGPTFRAENSNTTRHLAEFWMVEPEV 268

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +F   +D ++  E+ L+ V             FL
Sbjct: 269 AFNNLEDNIDLAEDFLKYVIGYVLENCKDDLEFL 302



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 51/139 (36%), Gaps = 15/139 (10%)

Query: 440 FPFYEWNEE----------EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
           FP  EW  +          EK  +     F  P+         +         D++  G 
Sbjct: 360 FPIEEWGADLQSEHERFLVEKHFESPVVLFDYPKEIKAFYMKLNEDGKTVAAMDVLFPGI 419

Query: 490 -EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
            EI  G  R    +V+ +    + + +  +           + G  PH G   G++R+V+
Sbjct: 420 GEIIGGSQREDKFDVLTEKMKAMNVDEHELW----WYLDTRKFGSVPHAGFGLGLERLVL 475

Query: 549 LLLGAKNVREVSLFPMSQN 567
            + G  N+R+V  FP + N
Sbjct: 476 FVTGMTNIRDVIPFPRTPN 494


>gi|116515154|ref|YP_802783.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116257008|gb|ABJ90690.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 461

 Score =  145 bits (367), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 49/291 (16%), Positives = 102/291 (35%), Gaps = 17/291 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
               +   + ++GW+   R    GI FL I D   I  +      + +     +    + 
Sbjct: 12  KKKYLNKEITINGWIRSKRTSKIGISFLTITDGSSINTIQVIAKKSLYNYVTEI----IK 67

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G  +  S   + +       E+ + KI+++   +         +++      K+  L
Sbjct: 68  LTTGCSVIISGVLVLSPGNLQIYEIQSNKIKVIGWIKNPEKYPISAKKHTIEHLRKFCHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
             R + +      R  +  S+   +  + ++  STPI+T+   EG+      S ++  + 
Sbjct: 128 RPRTNLISAISRIRNIVFQSLNLFLFNKQYLWVSTPIITSLDTEGSSSMFKVSMLDNNNQ 187

Query: 192 YA------------LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           Y                   Q      A    + + + P FR E+  + +   EF+ L++
Sbjct: 188 YTNNNNKKFFKKDVFLTVSGQLTLEAYACALSKVYSLGPIFRAENSNTKKHLTEFWMLEV 247

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
           E +F   +DI    E +L+       +       FL+   +  I  Y  D 
Sbjct: 248 EKAFSNINDISKFAEKLLKFSISYVLDNCISDLIFLQKKLNRNIISYLNDF 298



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 5/91 (5%)

Query: 481 QYD-LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
            +D LV N  EI  G  R      + +  + VG++       +       + G  PH G 
Sbjct: 374 AFDILVPNIGEIIGGSEREDRIMYLEKNMNKVGLN----SKNYSWYKDLRKYGTIPHSGF 429

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             G++R+++ + G KN+RE   FP +    D
Sbjct: 430 GLGLERLIIFITGIKNIRESIPFPRTIRHAD 460


>gi|296081811|emb|CBI20816.3| unnamed protein product [Vitis vinifera]
          Length = 404

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 23/230 (10%)

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG--- 116
           + A  +  E  + I+G++   S   +     T Q+E+  +K+  +S AE LP+ +     
Sbjct: 3   KYATGLSRESHVDIEGII---SVPGVPIKGATQQVEVQVRKLYGISKAENLPINIEDAAR 59

Query: 117 --------------EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFI 162
                              +  R  YR LDLR          + ++ N  R  +++E F+
Sbjct: 60  SESEIEKALQAGEQLVRVNQDTRLNYRVLDLRTPANQAIFRVQCQVENIFRQFLLSEGFV 119

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
              TP L   S EG           +G    L Q+PQ +KQ+ +   F R F+I P FR 
Sbjct: 120 GIHTPKLIGGSSEGGSAVFRLDY--KGQPACLAQSPQLHKQMAICGDFGRVFEIGPVFRA 177

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVS 271
           ED  + R   EF  LD+EM   E   ++++ ++ +   +F+  +      
Sbjct: 178 EDSFTHRHLCEFTGLDVEMEIKEHYFEVMDIVDRLFVAMFDSLNENCKKE 227



 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   A  PF       + L         +  +D+   G EI SG  R H+ + + +    
Sbjct: 296 RYPLAVRPFYTMPSYDDPL--------YSNSFDVFIRGEEIISGAQRVHVPDFLEKRAEA 347

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI  + +         +F+ G PPHGG   G++R+VML     N+R+ SLFP       
Sbjct: 348 CGIDVKTIST----YIDSFRYGAPPHGGFGVGLERVVMLFCALNNIRKTSLFPRDPTRIA 403

Query: 571 L 571
            
Sbjct: 404 P 404


>gi|241833933|ref|XP_002414971.1| asparaginyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215509183|gb|EEC18636.1| asparaginyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 464

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 69/350 (19%), Positives = 130/350 (37%), Gaps = 52/350 (14%)

Query: 14  VSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            +  G  V+L GWVH +R  G  ++FL +RD  G  Q V N +      A  + +E  +C
Sbjct: 66  SAHRGKRVKLFGWVHFLRRQGRSLMFLLVRDGTGFLQCVLNDELCHTYNALVLTTESTVC 125

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G++ +                                  + G+ E    I    R L 
Sbjct: 126 VYGVLKAV---------------------------------LEGKTESHVDIMLDNRHLA 152

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +T  K +  ++ ++   R    +++++E   P +  +  EG       +   + ++ 
Sbjct: 153 IRGETHSKIMFAKSAVMQCFRDYYFSKHYVEVIPPTMVQTQVEGGSTLFSFNYFGEEAY- 211

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y + ++ S     F +A  +R E  R+ R   EF  ++ E  F+  D+ L+ 
Sbjct: 212 -LTQSSQLYLETVIPS-LGDVFCVAQSYRAEQSRTRRHLSEFTHIEAECPFLTFDEFLDR 269

Query: 253 MENVLRGVFEEFSN-------------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           +E+++ GV E                        FLR+ Y +AI    T      +    
Sbjct: 270 IEDLVVGVCERILKSPAAEAVLELNPEFKVPERPFLRMQYSEAIEYLRTHNITKEDG-TF 328

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNEWA 348
           +   +    S  R  +  ++       +    K     +   D R+ E A
Sbjct: 329 YEFGDDIPESPERQMTDQINRPILLCRFPAELKAFYMQKCADDPRLTESA 378



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 47/122 (38%), Gaps = 13/122 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
           +       F M +         D    ++   DL+  G  EI  G +R   +E ++QAF 
Sbjct: 355 RFPAELKAFYMQKCAD------DPRLTESA--DLLMPGVGEIVGGSMRMWDAEELVQAFQ 406

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             GI        +       + G  PHGG   G +R V  +L   ++R+V L+P     C
Sbjct: 407 RKGIDPTP----YYWYIDQRKYGTCPHGGYGMGFERFVTWVLKRHHIRDVCLYPRFVGRC 462

Query: 570 DL 571
             
Sbjct: 463 KP 464


>gi|254565879|ref|XP_002490050.1| Mitochondrial asparaginyl-tRNA synthetase [Pichia pastoris GS115]
 gi|238029846|emb|CAY67769.1| Mitochondrial asparaginyl-tRNA synthetase [Pichia pastoris GS115]
 gi|328350454|emb|CCA36854.1| asparaginyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 478

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 99/250 (39%), Gaps = 17/250 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           S   ++GWV  VR    I F+DI D      ++        + AK +R+   + + G + 
Sbjct: 36  SQTTVNGWVKGVRVQKRIAFIDISDGTSFQNLMCVVPP---DQAKELRTGVSVQVTGEIK 92

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
             + ++ +  + T         +++L    +   P+  +   P+ +R     L  +   L
Sbjct: 93  ESNGKSQSIELKTTD----PDSVKVLGPVLD-SYPLQKKFHSPQFLR-TIPHLRWKTQFL 146

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----QGSFYA- 193
              +  R+ +   +      E F     P++T+S  EGA +       +    +  F+  
Sbjct: 147 SSILRFRSHVEMKLMEFFTQEQFTRTHPPLITSSDCEGAGELFKIESASRADIENKFFGK 206

Query: 194 --LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDIL 250
                   Q    ++     R + + PCFR E+  + R   EF+ L+ E++F+ +   + 
Sbjct: 207 DSYLTVSTQLHLEVLCMALSRVWTLTPCFRAEESDTHRHLSEFWMLEAEIAFISDVRQLT 266

Query: 251 NTMENVLRGV 260
              E +++ V
Sbjct: 267 TFCERMIKHV 276



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 54/149 (36%), Gaps = 26/149 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +         +++++P     +E K       PF M +         +        
Sbjct: 353 HEKWLTGEYFKSPVFVLNYP-----KESK-------PFYMTR---------NPDGKTVAC 391

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           +DL+     EI  G +R H  +++L       +  + +E            G   HGG  
Sbjct: 392 FDLLVPDVGEIIGGSMREHNIDLLLDEIKQRNMKTDDIE----WYLSLRSSGSVSHGGFG 447

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G +R++  L   +N+R+V  FP S   C
Sbjct: 448 MGFERLLCYLGCVENIRDVIPFPRSSRDC 476


>gi|195056323|ref|XP_001995060.1| GH22841 [Drosophila grimshawi]
 gi|193899266|gb|EDV98132.1| GH22841 [Drosophila grimshawi]
          Length = 460

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 65/317 (20%), Positives = 117/317 (36%), Gaps = 38/317 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             S  G  +++ GW+  VR     IFLDI D     +             + + S  V+ 
Sbjct: 19  NASKPGETLQVQGWIKNVRRLKNNIFLDINDGSTSEKFQLVVPRNA--STQQLASGSVIS 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFL 131
             G V              G  EL A  ++ L+    +   P   ++++      ++  L
Sbjct: 77  AVGRVQLAP---------NGHYELHADAVQCLAEGHLQDGYPFTPKQKHAPEYVREHLHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP-------- 183
             R D +   +  R +   ++   M   +F++ +TPILT +  EGA +            
Sbjct: 128 RARVDYIAAQMRIRHKAQKAIHDYMDELHFVQINTPILTTNDCEGAGEVFRVQPDSEQLL 187

Query: 184 ------------SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                       S  +Q  F  L  + Q + +  M+ G    + +AP FR E+ +S    
Sbjct: 188 KQMARPSVPVEQSYFDQKVF--LSVSGQLHLE-AMSYGLGNTYTLAPAFRAENSKSPLHL 244

Query: 232 GEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVSNNFLRICYD--DAIRRYGT 288
            EFY  + E+  +EQ D +   +E +L+ + +   N +    +F +   +    I     
Sbjct: 245 AEFYMFEAELVHMEQLDALAAFIERMLKDITQRLLNSSASDLHFCQESANAGSDIAWLQL 304

Query: 289 DKPDLRNPIIMHNVTEH 305
               L     M  + EH
Sbjct: 305 PWQRLSYDAAMAIIMEH 321



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 65/187 (34%), Gaps = 31/187 (16%)

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFY 443
            +    RL      +      D  K    AAD  +   QEL ++  +C    +++D+P  
Sbjct: 302 LQLPWQRLSYDAAMAIIMEHKDKFKSAVSAADGFSK-EQELFLV-AHCGAPVFVIDWP-- 357

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSE 502
                         PF M       +  +D   + A   DL+     E+  G +R   ++
Sbjct: 358 ----------TQQKPFYMK------VSRSDPQRVHAL--DLLMPAVGELCGGSLRECDAQ 399

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           ++             +           + G    GG   G +R + L+ G KN+R+V  F
Sbjct: 400 LLQAH--------PQLPRDLSWYVELRKFGGLHTGGFGMGFERYLQLVTGVKNIRDVIAF 451

Query: 563 PMSQNFC 569
           P   + C
Sbjct: 452 PRYPHSC 458


>gi|315054251|ref|XP_003176500.1| asparaginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311338346|gb|EFQ97548.1| asparaginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 550

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 105/276 (38%), Gaps = 26/276 (9%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            S     +R+ G V  +R      F  I D   +  + A       E A ++     + I
Sbjct: 61  SSLDNKELRVQGHVRFLRKQKRFTFAHISDGSSLQPIQA---VLTPEQATNLTQGAAVEI 117

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+          ++      EL A K++I+  A+    P+  +   P+ +R     L L
Sbjct: 118 TGIWQPSPPGKQQSH------ELQATKVDIVGEADPTTYPIQKKFHTPDFLRQL-PHLRL 170

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAEN---FIECSTPILTASSPEGARDFLVPSRVNQ-- 188
           R          R+  I  +     +     F++   P++T+S  EGA +    +  +   
Sbjct: 171 RTPFNALLSRLRSEFIYQVTEEFRSHYHLNFVQVQPPLITSSDCEGAGEVFTINPRDVVT 230

Query: 189 -----GSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  F+  P+    + Q + +   A+     + ++P FR E   + R   EFY L++
Sbjct: 231 EEGKVTEFFRSPKYLTVSSQLHLE-AYAAELGNVWTLSPTFRAEKSDTPRHLSEFYMLEV 289

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNF 274
           EMS+++  + +   +E +LR + +           F
Sbjct: 290 EMSYIDSLEPLTAFVETLLRNITQRVYKSPVAQELF 325


>gi|154278074|ref|XP_001539861.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150413446|gb|EDN08829.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 756

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 58/278 (20%), Positives = 100/278 (35%), Gaps = 27/278 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSV 65
           DL        V +   V   R     + FL +R      Q V            +    +
Sbjct: 291 DLSEELCEKDVTVVARVDNARVQSAKLAFLMLRQQGKKMQAVVSASDEISRPMVKWIGGI 350

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--- 122
               ++ +  +V        +A +    +EL  +K+ +++ A  +      + E P    
Sbjct: 351 NVNSIVKVTAVVKKAEIPVTSATVK--HLELHIRKVYLVAQASHMLPMQVKDAERPPPES 408

Query: 123 --------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                           R   R LDL+ +         + +       M+       STP 
Sbjct: 409 VTEEVESEAPYVTLKTRLDNRVLDLQTEASQAITWISSGVAQLFMEYMLKSGSRWISTPK 468

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LTA++ EG       +   + ++ A  Q+PQ YKQ+ +A   +  F+I P FR E+  + 
Sbjct: 469 LTANASEGGAGVFEVTYFKRKAYLA--QSPQLYKQMCIAGDMESVFEIGPVFRAEESNTH 526

Query: 229 RLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFS 265
           R   EF  LD E +F     ++L   E++L  V  E  
Sbjct: 527 RHLTEFVGLDFEKTFQSHYHEVLEFAEDLLVFVLSELK 564



 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/189 (26%), Positives = 75/189 (39%), Gaps = 27/189 (14%)

Query: 384 TEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-F 440
            +   +RL   +G +    AG D  +   F  D    + ++LG I    ++  + ++D F
Sbjct: 588 KDGKALRLKYMEGVALLKEAGVDVTEQERFENDLSTAMEKQLGRIIREKYDTDFYVLDKF 647

Query: 441 PFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           P             A  PF T P     +          +  YD    G EI SG  R +
Sbjct: 648 PM------------AVRPFYTKPCPDDPTF---------SNSYDFFMRGEEIMSGAQRIN 686

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
            ++ +  A S  G+        F     AF+ G PPH G   G++RIVM  LG  N+R  
Sbjct: 687 EAKELEAAMSAKGLDPNA--EGFEDYIGAFRQGCPPHAGGGLGLNRIVMFFLGLPNIRLA 744

Query: 560 SLFPMSQNF 568
           +LFP     
Sbjct: 745 TLFPRDPQR 753


>gi|326473276|gb|EGD97285.1| aspartyl-tRNA synthetase, cytoplasmic [Trichophyton tonsurans CBS
           112818]
          Length = 947

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 66/306 (21%), Positives = 120/306 (39%), Gaps = 26/306 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDS-----ACFEIAKSV 65
           +     G  +     +H VR  G    FL  R      Q V + +           A+ +
Sbjct: 132 ITDEMKGQELVFRARLHVVRRMGAKFAFLVFRQQLHTLQGVLHTEPKLRSANMIYWAERI 191

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-------- 117
               +L + G + +         I    +EL  +++ +    EE       E        
Sbjct: 192 PVGSILKVKGRLKTPDVPVFGTTIH--HLELEIEELHVAVRREEPVPFSVYEAELAGAHE 249

Query: 118 -------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                  ++ P+  R   R LDLR DT       ++ I    R  + A+NFIE  +P L 
Sbjct: 250 ERLEGIRQKIPDRTRLSNRILDLRTDTSQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQ 309

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           A++ E        +   + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R 
Sbjct: 310 AAATESGASVFGVNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRH 367

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             E+  LD+EM+  E   + L  +++VL+ +F+       +    ++  +      +  +
Sbjct: 368 LTEYTGLDIEMAIEEHYHEALEVLDSVLKSIFKTIYEKYRLEIEVIKHHFPSEDLVWLDE 427

Query: 290 KPDLRN 295
            P +  
Sbjct: 428 TPIISF 433



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 28/156 (17%)

Query: 415 DARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN 472
             R+ I   LG ++        +I+D           K      PF  MP    E     
Sbjct: 460 GTRDEI--RLGELVKEKFHTDYYILD-----------KFPATARPFYAMPHPDDERF--- 503

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                    +D+   G EI SGG R H  +++ +    VGI    +E         F+ G
Sbjct: 504 ------TLSFDIFVRGQEIVSGGQRIHHPDLLDKRMREVGIDPSTMEE----YMEGFKWG 553

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            PPH G   G++R++ML+L   N+R  SLF      
Sbjct: 554 APPHAGAGIGLERLLMLILKLGNIRLGSLFHRDPKS 589


>gi|302816976|ref|XP_002990165.1| hypothetical protein SELMODRAFT_428663 [Selaginella moellendorffii]
 gi|300142020|gb|EFJ08725.1| hypothetical protein SELMODRAFT_428663 [Selaginella moellendorffii]
          Length = 480

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 95/586 (16%), Positives = 170/586 (29%), Gaps = 161/586 (27%)

Query: 10  GDLGVSDVGSF----VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
            + G  + G      V ++G V   R           D               F     V
Sbjct: 32  DEFGQLEAGQRSNTLVSVAGKVMHKRLE--------PDSTCYVLESVVGKLPAFVDHARV 83

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY----- 120
                    G ++  S      +   G++ +S +K+ +L+          G+        
Sbjct: 84  PKLGAEIERGDIVGVSGFASACH---GELGISVEKLCLLAPCLRTLPEREGDSHTEQESW 140

Query: 121 --------------PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECS 165
                          +  R++ R LDL  +   K++   RT  +N +R  M      E +
Sbjct: 141 RPGKARDPSAYVLSDQEERYRNRVLDLIVNPDIKSVFAARTEAVNYIRTYMETSGVTEVN 200

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           T +L   S                    L  +  Q  Q L+ S F   ++I   FR+E+ 
Sbjct: 201 TGVLEQRSVANG---FKTHHNQLNLDMVLRVSSDQLLQ-LIVSNFFGVYEIGKQFRNEEM 256

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
                P EF   +M  ++ +  D++   E +L G+  + + G                  
Sbjct: 257 SRTHNP-EFTTCEMYKAYADYKDLMEMTEKLLSGLVMKITGGYK--------------VY 301

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
           Y +D  D  +P ++ + T          F ++  V    E   +       +    + + 
Sbjct: 302 YHSDGYD--SPPVVIDFT--------PPFRRVEVVKGLEEALGLKFPEDLASEQANEFLR 351

Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD 405
           E   S+G                                                     
Sbjct: 352 ETCSSKG------------------------------------------------VSCPP 363

Query: 406 PLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
           PL   +  +    H       +        +I+D+P        K+      PF      
Sbjct: 364 PLSTANLLSSLAGHF------LEATSVSPTFIVDYP--------KRST----PFA----- 400

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
               K +    + A  + L  +  +          SE                      L
Sbjct: 401 ----KTHSSTPVLAEHFKLFVSKSQCRDPAEAQENSE----------------------L 434

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +   + G+PP  G A GIDR+VMLL  + +++EV L+P  +   DL
Sbjct: 435 HTLLEYGLPPCSGWACGIDRLVMLLTDSVDIKEVVLYPALKPAEDL 480


>gi|326477742|gb|EGE01752.1| aspartyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 947

 Score =  145 bits (366), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 66/306 (21%), Positives = 120/306 (39%), Gaps = 26/306 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDS-----ACFEIAKSV 65
           +     G  +     +H VR  G    FL  R      Q V + +           A+ +
Sbjct: 132 ITDEMKGQELVFRARLHVVRRMGAKFAFLVFRQQLHTLQGVLHTEPKLRSANMIYWAERI 191

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-------- 117
               +L + G + +         I    +EL  +++ +    EE       E        
Sbjct: 192 PVGSILKVKGRLKTPDVPVFGTTIH--HLELEIEELHVAVRREEPVPFSVYEAELAGAHE 249

Query: 118 -------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                  ++ P+  R   R LDLR DT       ++ I    R  + A+NFIE  +P L 
Sbjct: 250 ERLEGIRQKIPDRTRLSNRILDLRTDTSQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQ 309

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           A++ E        +   + +F A  Q+PQ  KQ+ +AS F+R ++I   FR E+  + R 
Sbjct: 310 AAATESGASVFGVNYFGRPAFLA--QSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRH 367

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             E+  LD+EM+  E   + L  +++VL+ +F+       +    ++  +      +  +
Sbjct: 368 LTEYTGLDIEMAIEEHYHEALEVLDSVLKSIFKTIYEKYRLEIEVIKHHFPSEDLVWLDE 427

Query: 290 KPDLRN 295
            P +  
Sbjct: 428 TPIISF 433



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 28/156 (17%)

Query: 415 DARNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT-MPQGGMESLKGN 472
             R+ I   LG ++        +I+D           K      PF  MP    E     
Sbjct: 460 GTRDEI--RLGELVKEKFHTDYYILD-----------KFPATARPFYAMPHPDDERF--- 503

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                    +D+   G EI SGG R H  +++ +    VGI    +E         F+ G
Sbjct: 504 ------TLSFDIFVRGQEIVSGGQRIHHPDLLDKRMREVGIDPSTMEE----YMEGFKWG 553

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            PPH G   G++R++ML+L   N+R  SLF      
Sbjct: 554 APPHAGAGIGLERLLMLILKLGNIRLGSLFHRDPKS 589


>gi|327334755|gb|EGE76466.1| lysine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 494

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 109/291 (37%), Gaps = 14/291 (4%)

Query: 2   HRYRTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV--VANPDS 56
            +Y T   G+L +    +    V + G V  VR  G + F  ++D +  T          
Sbjct: 34  QKY-TDDTGELTLAPGEETTDEVTVGGRVVFVRNTGKLCFASLQDGFTETSNGERLQIML 92

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           +  E+     + W   +D L               G++ + A +  + S A      +  
Sbjct: 93  SKAEVGDESLAAWKSDVD-LGDHVWVRGRVVVSRRGELSIMAAEWRMASKALRPLPTL-- 149

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSP 174
            +E  E  R + R+ DL      + +V+ R  I  ++R  +    F+E  TPIL      
Sbjct: 150 HKELSEETRVRRRYADLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPILQLVHGG 209

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F            +L  A + Y +  M  G DR +++   FR+E   S     EF
Sbjct: 210 AAARPFNTHLNAFDIDM-SLRIALELYLKRAMVGGTDRVYEMGRVFRNEGIDSS-HSAEF 267

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             L+  MS+  Q  I   +++++  V +   + + +      I  D   R 
Sbjct: 268 SMLEAYMSWGNQFTIAEVIKDIIMAVADAL-DVHQIETPKGTIDLDGQWRW 317



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 28/157 (17%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             A      +  EL  +        ++ D+P        + +   H              
Sbjct: 356 WEAGKVVMELFGEL--VEPGLINPTFVCDYP-----AIAQPLARPHR------------- 395

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLY 526
            +D   ++A  +DL+  G E  +G        +  +  +   ++                
Sbjct: 396 -DDPRMVEA--WDLIIGGMERGTGFSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFL 452

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + G PP GG+  G+DR+VML   A  +RE  LFP
Sbjct: 453 EALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFP 488


>gi|315041621|ref|XP_003170187.1| lysyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311345221|gb|EFR04424.1| lysyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 567

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 70/331 (21%), Positives = 128/331 (38%), Gaps = 35/331 (10%)

Query: 6   THSCGDLGVSDVG---------SFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPD 55
           + +C +   +  G           V L G +   R  G  ++F D+  +    QV+ N  
Sbjct: 84  SLTCAEFRSNYDGIRPDETVDQDTVVLHGRIRSQRTAGKKLVFFDLVHNGHKVQVLCNQR 143

Query: 56  SACFEIA--KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPL 112
                    +  +  + L   G   S + +    +   G++ +   ++ +++S       
Sbjct: 144 VVGEAGISPEKFKEFYHLLRRGDSFSVTGKPHRTS--RGELTIKTTELPKLISPCLHDVP 201

Query: 113 PVFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
               E E         R ++ L   +    +  R+ I NSMR     ++F+E STPIL +
Sbjct: 202 VHQKELEISPY----ERHVEFLSSPSAANILRARSLITNSMRTFFANKDFVEVSTPILAS 257

Query: 172 SSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            S    A+ F+  +        +L  AP+ + + L+  GFDR F+I P FR+E       
Sbjct: 258 KSGGAIAQPFVTSATEFPERPLSLRIAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHN 317

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT------------VSNNFLRIC 278
           P EF   +   +F   + ++ T E++L  +  E    N              +  + R+ 
Sbjct: 318 P-EFTTCEFYQAFANLESLIETTESLLSTLASEVQQLNEKLNNSLNPTTVSFTGPYRRVD 376

Query: 279 YDDAIRR-YGTDKPDLRNPIIMHNVTEHFVH 308
           +  AI    G   PDL++   +  V E F  
Sbjct: 377 FIPAIEEAIGRKLPDLQSENALSQVKEIFAD 407



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 459 FTMPQGG-----MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG- 512
           F M          +S +  D   + + + +L   G EI +     +      + F +   
Sbjct: 439 FIMNHPECMSPLSKSYRHPDNEQVVSARAELFVEGKEIMNMYEEENSPFEQRRKFQHQLS 498

Query: 513 -ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               E       G     + G+PP GG   GIDR+ ML  GA+ + +V  F
Sbjct: 499 FRDPENAGELDEGYLETLEWGLPPTGGWGCGIDRLCMLFTGARRISDVLSF 549


>gi|164424687|ref|XP_958075.2| hypothetical protein NCU06866 [Neurospora crassa OR74A]
 gi|157070619|gb|EAA28839.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 489

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/355 (17%), Positives = 121/355 (34%), Gaps = 58/355 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + G+V  VR      F+ + D   +  + A         A+ +     + + G  +  
Sbjct: 18  VVVQGYVRSVRGMKTHRFVSLGDGSSLAPLQAVV-PVDTNQAEGLAIGAAVRLTGKWVPS 76

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                     +   E+   +++IL  ++    P+  + + PE +R     L  R      
Sbjct: 77  PG-------ASQSHEMQVTQVDILGPSDAKTFPIQKKYQTPEYLR-TIPHLRPRTPINAA 128

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP-----------SRVNQG 189
            +  R+  + ++       +F +   PILT+S  EGA +               +  N+ 
Sbjct: 129 LLRMRSEAVAALTRFFAENHFTQTHPPILTSSDCEGAGEVFTVAPASNVTELSSTEDNKS 188

Query: 190 SFYA----LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV- 244
             +           Q     +A      + ++P FR E   + R   EFY L+ EM+FV 
Sbjct: 189 KMFFRNKKYLTVSTQLHLEALAQSVGNVWTLSPVFRAEKSDTARHLSEFYMLEAEMNFVN 248

Query: 245 EQDDILNTMENVLRGVF--------------------------EEFSNGN--TVSNNFLR 276
           + D++++  E+++R +                           EE        +++ + R
Sbjct: 249 DLDEVMDLAEDMIRNMCITMYESPTVYEFLNREGRVGSDLVSPEEVKARWEGMMADEWPR 308

Query: 277 ICYDDAIRRYGTDKPDLR-NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           I Y DAI        +    P+     TE       +  ++ +       V   P
Sbjct: 309 ITYTDAIEFLQEHADEFEHKPVW----TEGLHSEHEKFIAEHVGDGKPVFVTDYP 359


>gi|85084624|ref|XP_957348.1| asparaginyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|28918438|gb|EAA28112.1| asparaginyl-tRNA synthetase [Neurospora crassa OR74A]
          Length = 580

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 64/301 (21%), Positives = 117/301 (38%), Gaps = 25/301 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPDSACFEIAKSVRSEWVL 71
             S  G+ V++ G +HR+R      FL ++D YG    V+   D      A     E  L
Sbjct: 146 DESKKGTRVKVFGRIHRLRVQKHATFLTLKDGYGFLQCVLPAGDLTKNYDALLFAQETAL 205

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVA----EELPLPVFGEREYPESIRFK 127
            + G +    A     +      EL     ++L  A    + +   V  +++  ++    
Sbjct: 206 VLYGELKKLPAGATAPDGR----ELQVDYYKVLGHAPSDLDAITNKVSRDQDAWDAAMLD 261

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R L LR +     +  R  +  +         F + S P +  +  EG           
Sbjct: 262 NRHLVLRGENASALMKLREFVELAFVDTYRELEFRKVSPPAMVQTQVEGGSTLFKYDYYG 321

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + ++  L Q+ Q Y + ++AS   + + I   FR E   + R   E+  ++ E+ F+E +
Sbjct: 322 EEAY--LTQSSQLYLETVLAS-MGQVYCIEKSFRAEKSLTRRHLSEYTHVEAELDFIEFN 378

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNN-------------FLRICYDDAIRRYGTDKPDLR 294
           D+L+ +E ++  V +   N  T +               FLR+ Y+DAI       P + 
Sbjct: 379 DLLDHLEEIISKVVDRVLNNETAAGYLKVLNPDFKKPEKFLRMKYEDAIEWLNKQDPPIL 438

Query: 295 N 295
           N
Sbjct: 439 N 439



 Score = 63.9 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 42/121 (34%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                   F M +     L+  + + +      L+    EI  G +R    + +++A+  
Sbjct: 471 HFPVEIKAFYMKK-DPNDLRVTESVDV------LMPGVGEIVGGSMRMDDYDELIEAYKK 523

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I        +       + G  PHGG   G++R +  +    +VR   L+P     C 
Sbjct: 524 NHIG----HEPYFWYTDQRKYGTSPHGGYGLGLERFLAWMANQHSVRTTCLYPRFMGRCK 579

Query: 571 L 571
            
Sbjct: 580 P 580


>gi|226737250|sp|Q4A5F3|SYK_MYCS5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|144575195|gb|AAZ44018.2| lysyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 491

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 114/265 (43%), Gaps = 16/265 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y ++S  +L   D+  +  L G +   R      F+ I+D++   Q+  N      ++
Sbjct: 44  EKYSSYSKEELESMDL--YFDLYGRITSQRGP----FIVIKDYFDKIQLYFNKKEHL-DL 96

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ V +  +    G ++    +    N  TG++ +  + +++L+   + PLP        
Sbjct: 97  AELVSNLDL----GDIIHAHGKLSKTN--TGELVVKIKTLKLLTKVLK-PLPDKFHGLSD 149

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               +++R+LDL  +     + K R++II+ +R    +  ++E  TP L+      A   
Sbjct: 150 IEEIYRHRYLDLISNEHSMEVFKKRSKIISLIRKYFDSNMYLEVETPFLSNYISGAAAKP 209

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                      + L  A +   + L+  G DR +++   FR+E   +   P EF  ++  
Sbjct: 210 FKTFHNALSQEFTLRIATEIPLKKLLIGGIDRVYEMGRIFRNEGIDTTHNP-EFTTIEFY 268

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS 265
            ++   + ++   E + + + +E +
Sbjct: 269 EAYSNLEKMMQRTEELFKLIAKELN 293



 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 80/224 (35%), Gaps = 14/224 (6%)

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-----FCS 411
           AY                +AK LN+   +     +++++      +  +  K     F +
Sbjct: 270 AYSNLEKMMQRTEELFKLIAKELNLKTLQNKGEEINLEEPFKRVDMIDEVSKATGVDFRN 329

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
              +    +A+E G+     +    I +   +E   E+  +          +    + + 
Sbjct: 330 VTLEKALELAKEHGVKLKKYYTVGHIAN-ELFEKLIEKTLVQPTFVMGHPIEISPLTYEA 388

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYR 527
           +D   +   + +L  NG E A+           L+ F +    K    +           
Sbjct: 389 SDPRYV--ERAELFINGKEYANMYTELSSPIEQLKRFEDQLNEKAQGNDESSDIDWDFIE 446

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP--MSQNFC 569
           A + GMPP GG   GIDR+VML    +++R+V  FP   ++   
Sbjct: 447 ALKYGMPPAGGCGIGIDRLVMLFTEKESIRDVLFFPTLKNKKSQ 490


>gi|27904819|ref|NP_777945.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29839434|sp|P59517|SYN_BUCBP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|27904217|gb|AAO27050.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 466

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 101/292 (34%), Gaps = 22/292 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           L    + S + + GWV   R    G++F+D+ D   +  +              +    V
Sbjct: 11  LNKIKLNSKINIQGWVRNRRRSKLGLLFIDLYDGSCLYTMQVVVKDILSNYDSEISKLSV 70

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               G  ++     I++     + E+ A+ ++++ +           + +          
Sbjct: 71  ----GCSINVFGVLISSIGTKQKYEIQAKVVKVIGIINNPGSYPISSKYHTMKHLRNVPH 126

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG- 189
           L  R +        R  + N++   +    +    +PI+T  + EGA D    S ++   
Sbjct: 127 LRSRTNFFGAVSRVRNYLFNALHEFLFKNGYYWIPSPIITGLNSEGAGDMFKVSILDLNN 186

Query: 190 -------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                         F+   A      Q      A    + +   P FR E+  + R   E
Sbjct: 187 IPKNKNGKINFKKDFFGKEAFLTVSGQLTLETYACSLSKVYSFGPIFRAENSNTRRHLSE 246

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           F+ L++E +F    DI+   EN+L+       +   +  NF R   D+ I  
Sbjct: 247 FWMLEVETAFSNLCDIIKFSENMLKYAIGIILDKCVIDINFFRENVDEKIFC 298



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 4/87 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R     V+ + F  + ++K      +       + G  PH G   G 
Sbjct: 383 LVPGVGEIIGGSEREERLNVLDRRFFELNLNK----EDYWWYRDLRKYGTIPHSGFGLGF 438

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +R++  +LG KN+R+V  FP +    D
Sbjct: 439 ERLLSYILGIKNIRDVCPFPRTAYKAD 465


>gi|325089080|gb|EGC42390.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 994

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/278 (20%), Positives = 100/278 (35%), Gaps = 27/278 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSV 65
           DL        V +   V   R     + FL +R      Q V            +    +
Sbjct: 529 DLSEELCEKDVTVVARVDNARVQSAKLAFLMLRQQGKKMQAVVSASDEISRPMVKWIGGI 588

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--- 122
               ++ +  +V        +A +    +EL  +K+ +++ A  +      + E P    
Sbjct: 589 NVNSIVKVTAIVKKAEIPVTSATVK--HLELHIRKVYMVAQASHMLPMQVKDAERPPPES 646

Query: 123 --------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                           R   R LDL+ +         + +       M+       STP 
Sbjct: 647 VTEEVESEAPYVTLKTRLDNRVLDLQTEASQAITWISSGVAQLFMEYMLKSGSRWISTPK 706

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LTA++ EG       +   + ++ A  Q+PQ YKQ+ +A   +  F+I P FR E+  + 
Sbjct: 707 LTANASEGGAGVFEVTYFKRKAYLA--QSPQLYKQMCIAGDMESVFEIGPVFRAEESNTH 764

Query: 229 RLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFS 265
           R   EF  LD E +F     ++L   E++L  +  E  
Sbjct: 765 RHLTEFVGLDFEKTFQSHYHEVLEFAEDLLVFILSELK 802



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 85/227 (37%), Gaps = 27/227 (11%)

Query: 346 EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG- 404
           E+A       L+ +  R  +   V            +  +   +RL   +G +    AG 
Sbjct: 788 EFAEDLLVFILSELKIRFKKEIEVIQRSYPKAGDFRLPKDGKALRLKYMEGVALLKEAGV 847

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-FPFYEWNEEEKKIDFAHNPF-TM 461
           D  +   F  D    + ++LG I    ++  + ++D FP             A  PF T 
Sbjct: 848 DVTEQERFENDLSTAMEKQLGRIIREKYDTDFYVLDKFPM------------AVRPFYTK 895

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
           P     +          +  YD    G EI SG  R + ++ +  A S  GI        
Sbjct: 896 PCPDDPTF---------SNSYDFFMRGEEIMSGAQRINEAKELEAAMSAKGIDPNA--EG 944

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           F     AF+ G PPH G   G++RIVM  LG  N+R  +LFP     
Sbjct: 945 FEDYIGAFRQGCPPHAGGGLGLNRIVMFFLGLPNIRLATLFPRDPQR 991


>gi|240280665|gb|EER44169.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 1008

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/278 (20%), Positives = 100/278 (35%), Gaps = 27/278 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSV 65
           DL        V +   V   R     + FL +R      Q V            +    +
Sbjct: 543 DLSEELCEKDVTVVARVDNARVQSAKLAFLMLRQQGKKMQAVVSASDEISRPMVKWIGGI 602

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--- 122
               ++ +  +V        +A +    +EL  +K+ +++ A  +      + E P    
Sbjct: 603 NVNSIVKVTAIVKKAEIPVTSATVK--HLELHIRKVYMVAQASHMLPMQVKDAERPPPES 660

Query: 123 --------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                           R   R LDL+ +         + +       M+       STP 
Sbjct: 661 VTEEVESEAPYVTLKTRLDNRVLDLQTEASQAITWISSGVAQLFMEYMLKSGSRWISTPK 720

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LTA++ EG       +   + ++ A  Q+PQ YKQ+ +A   +  F+I P FR E+  + 
Sbjct: 721 LTANASEGGAGVFEVTYFKRKAYLA--QSPQLYKQMCIAGDMESVFEIGPVFRAEESNTH 778

Query: 229 RLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFS 265
           R   EF  LD E +F     ++L   E++L  +  E  
Sbjct: 779 RHLTEFVGLDFEKTFQSHYHEVLEFAEDLLVFILSELK 816



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 85/227 (37%), Gaps = 27/227 (11%)

Query: 346  EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG- 404
            E+A       L+ +  R  +   V            +  +   +RL   +G +    AG 
Sbjct: 802  EFAEDLLVFILSELKIRFKKEIEVIQRSYPKAGDFRLPKDGKALRLKYMEGVALLKEAGV 861

Query: 405  DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-FPFYEWNEEEKKIDFAHNPF-TM 461
            D  +   F  D    + ++LG I    ++  + ++D FP             A  PF T 
Sbjct: 862  DVTEQERFENDLSTAMEKQLGRIIREKYDTDFYVLDKFPM------------AVRPFYTK 909

Query: 462  PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
            P     +          +  YD    G EI SG  R + ++ +  A S  GI        
Sbjct: 910  PCPDDPTF---------SNSYDFFMRGEEIMSGAQRINEAKELEAAMSAKGIDPNA--EG 958

Query: 522  FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            F     AF+ G PPH G   G++RIVM  LG  N+R  +LFP     
Sbjct: 959  FEDYIGAFRQGCPPHAGGGLGLNRIVMFFLGLPNIRLATLFPRDPQR 1005


>gi|225560791|gb|EEH09072.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 1009

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/278 (20%), Positives = 100/278 (35%), Gaps = 27/278 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSV 65
           DL        V +   V   R     + FL +R      Q V            +    +
Sbjct: 544 DLSEELCEKDVTVVARVDNARVQSAKLAFLMLRQQGKKMQAVVSASDEISRPMVKWIGGI 603

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--- 122
               ++ +  +V        +A +    +EL  +K+ +++ A  +      + E P    
Sbjct: 604 NVNSIVKVTAIVKKAEIPVTSATVK--HLELHIRKVYMVAQASHMLPMQVKDAERPPPES 661

Query: 123 --------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                           R   R LDL+ +         + +       M+       STP 
Sbjct: 662 VTEEVESEAPYVTLKTRLDNRVLDLQTEASQAITWISSGVAQLFMEYMLKSGSRWISTPK 721

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LTA++ EG       +   + ++ A  Q+PQ YKQ+ +A   +  F+I P FR E+  + 
Sbjct: 722 LTANASEGGAGVFEVTYFKRKAYLA--QSPQLYKQMCIAGDMESVFEIGPVFRAEESNTH 779

Query: 229 RLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFS 265
           R   EF  LD E +F     ++L   E++L  +  E  
Sbjct: 780 RHLTEFVGLDFEKTFQSHYHEVLEFAEDLLVFILSELK 817



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 85/227 (37%), Gaps = 27/227 (11%)

Query: 346  EWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG- 404
            E+A       L+ +  R  +   V            +  +   +RL   +G +    AG 
Sbjct: 803  EFAEDLLVFILSELKIRFKKEIEVIQRSYPKAGDFRLPKDGKALRLKYMEGVALLKEAGV 862

Query: 405  DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-FPFYEWNEEEKKIDFAHNPF-TM 461
            D  +   F  D    + ++LG I    ++  + ++D FP             A  PF T 
Sbjct: 863  DVTEQERFENDLSTAMEKQLGRIIREKYDTDFYVLDKFPM------------AVRPFYTK 910

Query: 462  PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
            P     +          +  YD    G EI SG  R + ++ +  A S  GI        
Sbjct: 911  PCPDDPTF---------SNSYDFFMRGEEIMSGAQRINEAKELEAAMSAKGIDPNA--EG 959

Query: 522  FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            F     AF+ G PPH G   G++RIVM  LG  N+R  +LFP     
Sbjct: 960  FEDYIGAFRQGCPPHAGGGLGLNRIVMFFLGLPNIRLATLFPRDPQR 1006


>gi|71894621|ref|YP_278729.1| lysyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 493

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 114/265 (43%), Gaps = 16/265 (6%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            +Y ++S  +L   D+  +  L G +   R      F+ I+D++   Q+  N      ++
Sbjct: 46  EKYSSYSKEELESMDL--YFDLYGRITSQRGP----FIVIKDYFDKIQLYFNKKEHL-DL 98

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A+ V +  +    G ++    +    N  TG++ +  + +++L+   + PLP        
Sbjct: 99  AELVSNLDL----GDIIHAHGKLSKTN--TGELVVKIKTLKLLTKVLK-PLPDKFHGLSD 151

Query: 122 ESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
               +++R+LDL  +     + K R++II+ +R    +  ++E  TP L+      A   
Sbjct: 152 IEEIYRHRYLDLISNEHSMEVFKKRSKIISLIRKYFDSNMYLEVETPFLSNYISGAAAKP 211

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                      + L  A +   + L+  G DR +++   FR+E   +   P EF  ++  
Sbjct: 212 FKTFHNALSQEFTLRIATEIPLKKLLIGGIDRVYEMGRIFRNEGIDTTHNP-EFTTIEFY 270

Query: 241 MSFVEQDDILNTMENVLRGVFEEFS 265
            ++   + ++   E + + + +E +
Sbjct: 271 EAYSNLEKMMQRTEELFKLIAKELN 295



 Score = 94.0 bits (232), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 80/224 (35%), Gaps = 14/224 (6%)

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLK-----FCS 411
           AY                +AK LN+   +     +++++      +  +  K     F +
Sbjct: 272 AYSNLEKMMQRTEELFKLIAKELNLKTLQNKGEEINLEEPFKRVDMIDEVSKATGVDFRN 331

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
              +    +A+E G+     +    I +   +E   E+  +          +    + + 
Sbjct: 332 VTLEKALELAKEHGVKLKKYYTVGHIAN-ELFEKLIEKTLVQPTFVMGHPIEISPLTYEA 390

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYR 527
           +D   +   + +L  NG E A+           L+ F +    K    +           
Sbjct: 391 SDPRYV--ERAELFINGKEYANMYTELSSPIEQLKRFEDQLNEKAQGNDESSDIDWDFIE 448

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP--MSQNFC 569
           A + GMPP GG   GIDR+VML    +++R+V  FP   ++   
Sbjct: 449 ALKYGMPPAGGCGIGIDRLVMLFTEKESIRDVLFFPTLKNKKSQ 492


>gi|159109388|ref|XP_001704959.1| Asparaginyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157433035|gb|EDO77285.1| Asparaginyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 548

 Score =  145 bits (365), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/332 (18%), Positives = 116/332 (34%), Gaps = 21/332 (6%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSV-RSEWVLCID 74
           V   V + GW HRVR     + F+ +RD  G  Q+V N         +++ R+E  +   
Sbjct: 116 VDKPVVVCGWCHRVRVSSPKLAFVVLRDGTGYCQLVLNEACMGTRRTQTLLRTEAAVKAV 175

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G++++ +          G  E+     +I+  +           E     R + R L  R
Sbjct: 176 GILVADTRAQ-------GGYEIQCLYFDIIGPSSGEFETRITP-ESGPDARARERHLIHR 227

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            +     +  R RI+ + R     + + E + P +  +  EG           + ++  L
Sbjct: 228 GEHGSAILKARGRILRAFRNHFYFKGWTEVTPPTIVNTECEGGSSLFKVDFYGEDAY--L 285

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
            Q+ Q Y + ++ S     + I P FR E   + R   EF  L+ E  F+   ++L  +E
Sbjct: 286 TQSSQLYLESVI-SALGDVYCILPSFRAEKSNTRRHLSEFTHLETEHPFITFSELLGIIE 344

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
           + +  V  E  N       F  +        +      L+ P        H    ++   
Sbjct: 345 DFVISVVTELKN----DKQFYPLVQFLNGDNFDKIASSLKKPFKRMR---HSEGIDWLND 397

Query: 315 SKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
             I   +     +          R   D + E
Sbjct: 398 HGITKEDGTAFTYDDDIPEAQE-RKMIDAIGE 428



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 76/227 (33%), Gaps = 37/227 (16%)

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           ++   + E  N     P+ + LN  N + I   L        F                 
Sbjct: 346 FVISVVTELKNDKQFYPLVQFLNGDNFDKIASSLK-----KPFKRMRHSEGIDWL----- 395

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDF-------AHNP-----FTMPQGG 465
                + GI   +   F +  D P     +E K ID         H P     F M +  
Sbjct: 396 ----NDHGITKEDGTAFTYDDDIP---EAQERKMIDAIGEPVFLTHFPAHLKSFYMARCS 448

Query: 466 MESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
            +    +    +     DL+     EI  G +R    E   +A  + G+       R+  
Sbjct: 449 DDP---SSPDYLLTESVDLLVPTVGEIVGGSMRKWTYEDTYKACVDAGLPI----KRYYW 501

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
              + + G  PHGG+  G++R +  LLG   VR+  L+P +    + 
Sbjct: 502 YLDSRKFGGCPHGGMGLGLERFICWLLGIYTVRDTVLYPRAPGLIEP 548


>gi|271963405|ref|YP_003337601.1| aspartate--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|270506580|gb|ACZ84858.1| Aspartate--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 428

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 20/243 (8%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
            VG  VRL+GW+HR R    + FL IRD  G+ QVV        E         VL I G
Sbjct: 13  HVGRHVRLAGWLHRRRDLKSVSFLVIRDRSGLAQVVLGQPVPYPEE-------TVLQISG 65

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR--FKYRFLDL 133
            V++            G  EL+   IE+L+ A E P         P ++     +  + L
Sbjct: 66  TVVANPQ-------APGGAELTGPTIEVLAEAVEPPPFDLYRPTVPATLPTVLDHAPVAL 118

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R   L          +   R  +    F+E  TP +  ++ E   +        + +F A
Sbjct: 119 RHPRLRAPFEIAAAGVAGFRAALDGLGFVESQTPKIVGTATESGANVFGIDYFGRPAFLA 178

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNT 252
             Q+PQ +KQ L    F+R +++ P FR E   + R   ++  LD E+ FV +  D++  
Sbjct: 179 --QSPQFFKQAL-VGVFERVYEVGPVFRAEPHDTARHLAQYTSLDAELGFVRDHRDVMAV 235

Query: 253 MEN 255
           +  
Sbjct: 236 LRE 238



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 26/140 (18%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLV 485
           +  +  EF ++  +P                PF T P                +  +DL+
Sbjct: 308 LREHGSEFLFVTGYPM------------VKRPFYTHPDPERPEF---------SRSFDLL 346

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
             G E+ +GG R H     L A +  G   +     + G   AF  GMPPHGG A G++R
Sbjct: 347 FRGLELVTGGQRLHRHADYLAALAVRGEDPQA----YAGYLAAFAHGMPPHGGFAIGLER 402

Query: 546 IVMLLLGAKNVREVSLFPMS 565
               L GA N+R+ +LFP  
Sbjct: 403 WTSRLTGAANIRQTTLFPRD 422


>gi|255940966|ref|XP_002561252.1| Pc16g09340 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585875|emb|CAP93604.1| Pc16g09340 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 531

 Score =  144 bits (364), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 62/314 (19%), Positives = 116/314 (36%), Gaps = 22/314 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIA 62
           +R+          V   V +SG +   R  G  +IF DI       QV+ N         
Sbjct: 62  FRSRYAKLADNDSVEDTVIVSGRIRTYRLAGSKLIFFDIVQDGHKVQVMCNKRRLESVSP 121

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYP 121
           +  +  + L   G   S +          G++ +   ++ ++LS           E E  
Sbjct: 122 EDFKKFYRLLRRGDAFSVTGRPH--RTGRGELTVDVNELPQLLSPCLHDVPVHGTEHETS 179

Query: 122 ESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
                  R +  L        I  R+ ++  +R   +  +F+E STPI+ + +    AR 
Sbjct: 180 PYP----RHVQFLANPATADIIRARSALVQYLRQFFVDRSFMEVSTPIVGSVAGGAIARP 235

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F   +        +L  AP+ + + L+  GF++ F+I P FR+E         EF   + 
Sbjct: 236 FYTSATEFPDRQLSLRIAPELWLKRLVVGGFEKIFEIGPSFRNEGLDKTHN-AEFTTCEF 294

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGN----------TVSNNFLRICYDDAIRRY-GT 288
             ++   ++++   E++L G+       N            +  F R+ +   I    G 
Sbjct: 295 YQAYANLENLMAMTEDLLSGMAAHIRALNTTGTLNPTTANFTAPFRRVDFLTGIEEATGH 354

Query: 289 DKPDLRNPIIMHNV 302
             P+L +P  +  V
Sbjct: 355 KLPNLESPDALDKV 368



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 3/87 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS---NVGISKEVVENRFGGLYRAFQCGMPP 535
           A + +L   G E+ +     +      + F      G +             A + G+P 
Sbjct: 431 AARGELFIEGKEVVNTYEEENSPFEQRRKFEDQLRYGKATGEAGEIDESYLEALEWGLPS 490

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLF 562
            GG   G+DR+ ML  GAK + +V  F
Sbjct: 491 TGGWGCGVDRLCMLFTGAKRITDVLPF 517


>gi|295673082|ref|XP_002797087.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226282459|gb|EEH38025.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 521

 Score =  144 bits (364), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 57/281 (20%), Positives = 112/281 (39%), Gaps = 24/281 (8%)

Query: 4   YRTHSCGDL---------GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVAN 53
            R+ SC +            +     V + G +   R  G  +IFLD+  +    Q++ N
Sbjct: 77  KRSISCDEFHTRYNSLVPNETAEQDKVVICGRIQSARSAGSKLIFLDLVQNGRKVQILCN 136

Query: 54  PDSACFE--IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEEL 110
                      +  +  + L   G V+S            G++ ++  ++ ++++     
Sbjct: 137 QRHMDAMGVTPEKFKQFYHLLRRGDVLSVIGNPH--RTGRGELSVTVSELPKLITPCLHD 194

Query: 111 PLPVFGEREYPESIRFKYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                 E+E         R + L    T    +  R+ II  +R      +F+E  TPIL
Sbjct: 195 IPLRVKEQETSPY----DRHVQLLSSPTAVDILRTRSAIIQYIRNFFFNRSFMEVETPIL 250

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            + +    AR F   +        AL  AP+ + + L+  GFD+ F+I P FR+ED   +
Sbjct: 251 ASVAGGAVARPFQTCATEFPERPLALRIAPELWLKRLVVGGFDKVFEIGPSFRNED---N 307

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
               EF   +   ++ + + +++T E++L G+ +     + 
Sbjct: 308 THNPEFTTCEFYHAYADLETLISTSESLLTGLSQHIHTHHQ 348


>gi|321309599|ref|YP_004191928.1| asparaginyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801443|emb|CBY92089.1| asparaginyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 443

 Score =  144 bits (364), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 94/266 (35%), Gaps = 13/266 (4%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           L  S++    R+ GWV   + HG  ++F+ + D      +         +I      +  
Sbjct: 7   LKNSELNQKTRIEGWVKSFQVHGKDLVFISLNDGSTCKDL---------QIVCKTGIDTS 57

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L   G  +S S     +      +E  A  +EILS A++       ++E+      +   
Sbjct: 58  LLTVGSAISASGFLQKSPKGGQDLEFVADGVEILSSADQKFPIQ--KKEHGFEFLREVSH 115

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR-VNQG 189
              R          +  +  S+     +  F     PILT+++ EG  +        N  
Sbjct: 116 QRARTRLFRIVNAIKNEVNYSIHEFFYSHGFTWIQAPILTSNNCEGGSEVFEIKNSENSF 175

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L     Q+    MA G    +   P FR E   + +   EF+ ++ E SF   D  
Sbjct: 176 KKTTLLSVSGQFHAEAMALGLKDVYTFGPTFRAEKSNTSQHLSEFWMIEPECSFSNLDGN 235

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFL 275
           +N ME+ L+ V             FL
Sbjct: 236 INLMEDFLKFVVNRVLRNCHEELEFL 261



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 39/115 (33%), Gaps = 13/115 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
               A   F M     E++   DL         LV    E+  G  R    E +      
Sbjct: 336 HYPRAIKAFYMKDCEDETVLAVDL---------LVPEVGELMGGSERESDFEKLRIKAEE 386

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            GI      +         + G     G   G +R++M L G KN++++  +P S
Sbjct: 387 FGIPL----DHLNWYLELRKYGYYSSAGFGCGYERLIMYLTGMKNIKDIINYPRS 437


>gi|313814026|gb|EFS51740.1| lysyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
          Length = 494

 Score =  144 bits (364), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 109/291 (37%), Gaps = 14/291 (4%)

Query: 2   HRYRTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV--VANPDS 56
            +Y T   G+L +    +    V + G V  VR  G + F  ++D +  T          
Sbjct: 34  QKY-TDDTGELTLAPGEETTDEVTVGGRVVFVRNTGKLCFASLQDGFTETSNGERLQIML 92

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           +  E+     + W   +D L               G++ + A +  + S A      +  
Sbjct: 93  SKAEVGDESLAAWKSDVD-LGDHVWVRGRVVVSRRGELSIMAAEWRMASKALRPLPTL-- 149

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSP 174
            +E  E  R + R+ DL      + +V+ R  I  ++R  +    F+E  TPIL      
Sbjct: 150 HKELSEETRVRRRYADLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPILQLVHGG 209

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F            +L  A + Y +  M  G DR +++   FR+E   S     EF
Sbjct: 210 AAARPFNTHLNAFDIDM-SLRIALELYLKRTMVGGTDRVYEMGRVFRNEGIDSS-HSAEF 267

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             L+  MS+  Q  I   +++++  V +   + + +      I  D   R 
Sbjct: 268 SMLEAYMSWGNQFTIAEVIKDIIMAVADAL-DVHQIETPKGTIDLDGQWRW 317



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 28/157 (17%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             A      +  EL  +        ++ D+P        + +   H              
Sbjct: 356 WEAGKVVMELFGEL--VEPGLINPTFVCDYP-----AIAQPLARPHR------------- 395

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLY 526
            +D   ++A  +DL+  G E  +G        +  +  +   ++                
Sbjct: 396 -DDPRMVEA--WDLIIGGMERGTGFSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFL 452

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + G PP GG+  G+DR+VML   A  +RE  LFP
Sbjct: 453 EALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFP 488


>gi|320583689|gb|EFW97902.1| Mitochondrial asparaginyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 469

 Score =  144 bits (364), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 126/335 (37%), Gaps = 38/335 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +G  ++L+GWV  +R    + F+D+ D      +          I K++ +   + I G+
Sbjct: 38  IGDKIKLNGWVKSLRISKNVAFVDLVDGSSHGDIKCVVRPPSL-IPKALNTGAGVQISGV 96

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR--FKYRFLDLR 134
                 +      +T Q E    +I++    EE   P+  +    + +R   +YR+   R
Sbjct: 97  WTEGKGKQNFELQVTEQPE---SQIQVYGGVEE-LYPLQKKTHSSQFLRSIPEYRW---R 149

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ----GS 190
                  +   +++ +S        +F +   P +T+S  EGA +       ++      
Sbjct: 150 VPEAGSILRMSSKLESSFSKFFDEHSFFKTHPPTVTSSDCEGAGELFRIESDSKLGSREQ 209

Query: 191 FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           F+   A      Q    ++ +   R + + PCFR E+  ++R   EF+ L+ E++F++  
Sbjct: 210 FFGKKAYMTVSTQLHLEVLCAALGRVWTLTPCFRAEESDTNRHLSEFWMLEAEIAFID-- 267

Query: 248 DILNTME---NVLRGVFEEFSNGNTVS--------------NNFLRICYDDAIRRYGTDK 290
           D+         +LR V     N                     + +I Y +AI     + 
Sbjct: 268 DVSQLTRFSEEMLRYVARTLQNSGFDEFSEETKQRWDMLANGTYTQITYSEAIDLVRQNS 327

Query: 291 PDLRN-PIIMHNV-TEHFVHSEFRVFSKILSVNPG 323
            + +  P+   ++ +EH        +   + V   
Sbjct: 328 TNFKTVPMWGDSLGSEHEKWLAGEYYKGPVFVTNY 362



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 26/137 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             ++ ++P     E++K       PF M        K ND  ++    YDL+     E+ 
Sbjct: 356 PVFVTNYP-----EDQK-------PFYMK-------KNNDGKTVAC--YDLLIPQIGELI 394

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G +R H  + + Q  ++  +    ++          + G  PHGG   G +R++  + G
Sbjct: 395 GGSLREHDLQKLEQETADRQMDIGPLQ----WYLNLRKNGSVPHGGFGMGFERLLQYMSG 450

Query: 553 AKNVREVSLFPMSQNFC 569
           A+N+R+   FP + N C
Sbjct: 451 AENIRDTIPFPRTTNHC 467


>gi|255934850|ref|XP_002558452.1| Pc12g16540 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|255942169|ref|XP_002561853.1| Pc18g00060 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583071|emb|CAP81281.1| Pc12g16540 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211586586|emb|CAP94230.1| Pc18g00060 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 556

 Score =  144 bits (364), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 60/298 (20%), Positives = 109/298 (36%), Gaps = 30/298 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFEIAK---SV 65
           +         V +   V   R     + FL + +    +  V+A  +    ++ K    +
Sbjct: 88  EFSEDHYEKEVTVVARVDNARVQSAKLAFLMLRQQGQKVQAVIAAAEPISRQMIKYTGGL 147

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--- 122
               ++ + G+V        +A+I    +E+  +K+ ++S A ++      + E P    
Sbjct: 148 NVNSIVQVTGIVKKPEIPISSASIS--HLEIHIRKVYMISEAAQMLPMQVKDAERPPPEN 205

Query: 123 -----------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
                              R   R LDL+ +T        + +       MI        
Sbjct: 206 TEEGAQVDAEGAPIVTLKTRLDNRVLDLQTETSQAITWISSGVSELFAEYMIKSGSRWIF 265

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP L  ++ EG           + ++ A  Q+PQ YKQ+ +A   +  F+IAP FR ED 
Sbjct: 266 TPKLVGAATEGGSGVFEVKYFKRNAYLA--QSPQLYKQMCIAGDMENVFEIAPVFRAEDS 323

Query: 226 RSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
            + R   EF  LD E +F     ++L   EN+L  +  +           ++  Y  A
Sbjct: 324 NTHRHLTEFSGLDFEKTFRNHYHEVLEFAENLLVFILTQLKERYATQIATIQKSYPKA 381



 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 77/188 (40%), Gaps = 25/188 (13%)

Query: 384 TEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-F 440
            +   +RL+  DG +    AG D  +  SF  D    + ++LG I  + ++  + ++D F
Sbjct: 388 KDGKALRLNYMDGVALLKEAGVDVSEQESFENDFTTAMEKQLGQIIRDKYDTDFYVLDKF 447

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P             A  PF          K +      +  YD    G EI SG  R H 
Sbjct: 448 PM------------AVRPFYT--------KADPNDKRFSNSYDFFMRGEEIMSGAQRIHD 487

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            + + ++    G+     +  F     AF+ G PPH G   G++RIVM  LG  NVR  S
Sbjct: 488 IKELEESMRAKGLEPN--QEGFEDYLNAFRQGCPPHAGGGLGLNRIVMFFLGLPNVRLAS 545

Query: 561 LFPMSQNF 568
           LFP     
Sbjct: 546 LFPRDPQR 553


>gi|50841670|ref|YP_054897.1| lysyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289424611|ref|ZP_06426394.1| lysine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289428873|ref|ZP_06430553.1| lysine--tRNA ligase [Propionibacterium acnes J165]
 gi|295129747|ref|YP_003580410.1| lysine--tRNA ligase [Propionibacterium acnes SK137]
 gi|50839272|gb|AAT81939.1| lysyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289155308|gb|EFD03990.1| lysine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289157874|gb|EFD06097.1| lysine--tRNA ligase [Propionibacterium acnes J165]
 gi|291375112|gb|ADD98966.1| lysine--tRNA ligase [Propionibacterium acnes SK137]
 gi|332674584|gb|AEE71400.1| lysine--tRNA ligase [Propionibacterium acnes 266]
          Length = 510

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 109/291 (37%), Gaps = 14/291 (4%)

Query: 2   HRYRTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV--VANPDS 56
            +Y T   G+L +    +    V + G V  VR  G + F  ++D +  T          
Sbjct: 50  QKY-TDDTGELTLAPGEETTDEVTVGGRVVFVRNTGKLCFASLQDGFTETSNGERLQIML 108

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           +  E+     + W   +D L               G++ + A +  + S A      +  
Sbjct: 109 SKAEVGDESLAAWKSDVD-LGDHVWVRGRVVVSRRGELSIMAAEWRMASKALRPLPTL-- 165

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSP 174
            +E  E  R + R+ DL      + +V+ R  I  ++R  +    F+E  TPIL      
Sbjct: 166 HKELSEESRVRRRYADLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPILQLVHGG 225

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F            +L  A + Y +  M  G DR +++   FR+E   S     EF
Sbjct: 226 AAARPFNTHLNAFDIDM-SLRIALELYLKRTMVGGTDRVYEMGRVFRNEGIDSS-HSAEF 283

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             L+  MS+  Q  I   +++++  V +   + + +      I  D   R 
Sbjct: 284 SMLEAYMSWGNQFTIAEVIKDIIMAVADAL-DVHQIETPKGTIDLDGQWRW 333



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 28/157 (17%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             A      +  EL  +        ++ D+P        + +   H              
Sbjct: 372 WEAGKVVMELFGEL--VEPGLINPTFVCDYP-----AIAQPLARPHR------------- 411

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLY 526
            +D   ++A  +DL+  G E  +G        +  +  +   ++                
Sbjct: 412 -DDPRMVEA--WDLIIGGMERGTGFSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFL 468

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + G PP GG+  G+DR+VML   A  +RE  LFP
Sbjct: 469 EALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFP 504


>gi|311112376|ref|YP_003983598.1| lysine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310943870|gb|ADP40164.1| lysine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 527

 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 104/259 (40%), Gaps = 12/259 (4%)

Query: 10  GDLGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           G+L   D     V + G V  VR  G + F  ++      ++ A       E+ +   ++
Sbjct: 67  GELTAGDETDHVVHVPGRVVFVRNTGKLCFASLQAGTNGDRIQAMLSLN--EVGEQSLAD 124

Query: 69  WVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           W   +D G  +  +   + +    G++ +  ++  +   A+ +       ++  E  R +
Sbjct: 125 WKSLVDLGDHVYVTGRVVVSR--RGELSIMVREWRM--AAKSIRPMPVLHKDLNEETRVR 180

Query: 128 YRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSR 185
            R+LDL      +++VK R  I  ++R  +    +IE  TP+L        AR F     
Sbjct: 181 RRYLDLMVRPEARDLVKKRALITRTVRRVLEDHGYIELETPVLQLVHGGATARPFRTHLN 240

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                   +  A +   +  +  G +R ++I   FR+E   S   P EF  L+   ++ +
Sbjct: 241 AFD-QPMTMRIATELPLKRAVVGGIERVYEIGRVFRNEGVDSTHSP-EFTTLECYEAYAD 298

Query: 246 QDDILNTMENVLRGVFEEF 264
           Q  +   M+ ++    +E 
Sbjct: 299 QYVMAERMQEIIVACAQEL 317



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 16/103 (15%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPP 535
             +DL+  G E  +         +  +  +         ++          RA + G PP
Sbjct: 422 EAWDLIIGGMERGTAFSELIDPVIQRERLTEQSHKAAAGDDEAMELDEDFLRALEHGAPP 481

Query: 536 HGGIAAGIDRIVMLLLGAKN------------VREVSLFPMSQ 566
            GG+  G+DR++MLL G ++            +RE  LFP+ +
Sbjct: 482 MGGLGLGVDRLIMLLAGEQDPERPGTVVRQPGIRETILFPLMK 524


>gi|297802054|ref|XP_002868911.1| hypothetical protein ARALYDRAFT_490730 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314747|gb|EFH45170.1| hypothetical protein ARALYDRAFT_490730 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 57/274 (20%), Positives = 98/274 (35%), Gaps = 17/274 (6%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS----ACFEIAKSVRS 67
           L    VGS V + G VH+ R  G  +F+ +R   G T      ++       +  K +  
Sbjct: 57  LVEEIVGSEVSIRGRVHKNRLVGTKLFVILR-ESGFTVQCVVEETRVGANMIKFVKQLSR 115

Query: 68  EWVLCIDGLVMSRSAETINANIITGQI---ELSAQKIEILSVAEELPLPVFGERE----- 119
           E V+ + G+V                +    L    + +   A          ++     
Sbjct: 116 ESVVELIGVVSHPKKPLTGTTQQKNVLPRRSLLNLPLVVEDAARSESDIEKSGKDGKPAA 175

Query: 120 -YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              +  R   R LD+R          + ++   +         +E  TP L A S EG  
Sbjct: 176 RVLQDTRLNNRVLDIRTPANQAIFRIQCQVQIDIMICHYPNRVLEIHTPKLMAGSSEGGS 235

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                    +G    L Q+PQ +KQ+ +     R F++ P FR ED  + R   EF  LD
Sbjct: 236 AVFRLDY--KGQPACLAQSPQLHKQMAICGDMRRVFEVGPVFRAEDSFTHRHLCEFVGLD 293

Query: 239 MEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVS 271
           +EM   +   +I++ +  +   +F +        
Sbjct: 294 VEMEIRMHYSEIMDLVGELFPFIFTKIEERCPKE 327



 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 80/215 (37%), Gaps = 26/215 (12%)

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADAR 417
           +IF +++E      +  V K     + + +   L +   +    +     +      D  
Sbjct: 315 FIFTKIEERCP-KELESVKKQYPFQSLKFLPQTLRLTFAEGIQMLKEAGEEV-DPLGDLN 372

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLS 476
               ++LG +    ++     +F          +   A  PF TMP     +        
Sbjct: 373 TESERKLGQLVLEKYK----TEFYMLH------RYPLAVRPFYTMPYENDSNY------- 415

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  +D+   G EI SG  R H  E++ +      I  + +         AF+ G PPH
Sbjct: 416 --SNSFDVFIRGEEIMSGAQRIHDPELLEKRARECCIDVKTIST----YIDAFRYGAPPH 469

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG   G++R+VMLL    N+R+ SLFP        
Sbjct: 470 GGFGVGLERVVMLLCALNNIRKTSLFPRDSQRLTP 504


>gi|71027745|ref|XP_763516.1| aspartyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68350469|gb|EAN31233.1| aspartyl-tRNA synthetase, putative [Theileria parva]
          Length = 604

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 67/295 (22%), Positives = 115/295 (38%), Gaps = 21/295 (7%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC--FEIAKSVR 66
             DL  S V  +V + G +H +R  GGI FL +R    + Q V +  S     ++ K   
Sbjct: 92  IKDLDNS-VSQYVWIRGRIHELRGKGGICFLILRQQRELLQCVIDSKSENNTKDMVKWTS 150

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------- 119
           +     +  +              T   ELS  KI  +S +      +  +         
Sbjct: 151 ALSFESVVDVYGKVVVPNTPILSTTSSNELSVSKIYCISRSSTNLPFLLRDANNTDNEEM 210

Query: 120 --------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
                     +  R   R LDLR          ++ +    R  +++ +F+E  TP L  
Sbjct: 211 MENPNVIRVNQDTRLDNRALDLRCFVNGVIFKIQSAVCQLYREFLLSHDFVEIHTPKLLG 270

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
            S EG          +Q +   L Q+PQ YKQ+ +     R F+I P FR E+  + R  
Sbjct: 271 GSSEGGSSVFKFKYFDQDA--CLAQSPQLYKQMAICGDLKRVFEIGPVFRAENSNTHRHL 328

Query: 232 GEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            E+  LDMEM  + +  ++++ ++ +L+ VF      N    ++    +   +R 
Sbjct: 329 CEYVGLDMEMEILNDYTEVIDLIDQMLKSVFTGLMERNKEELDYFYKSFPSIMRF 383



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 4/93 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD    G EI SG  R H S  +       GI    +++        F+ G  PH G
Sbjct: 516 SRSYDFFMRGEEILSGAQRIHDSVELEARARACGIDVNTIKD----YIEVFRYGSFPHAG 571

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
              G++R+VML LG  N+R  S+FP        
Sbjct: 572 SGIGLERVVMLFLGLTNIRRTSMFPRDPKRLTP 604


>gi|253744599|gb|EET00785.1| Asparaginyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 548

 Score =  144 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 64/330 (19%), Positives = 115/330 (34%), Gaps = 21/330 (6%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAK-SVRSEWVLCIDGL 76
             V + GW HRVR     + F+ +RD  G  Q+V N       I + S+R+E  +   G 
Sbjct: 118 KPVTVYGWCHRVRVSSPKLAFVVLRDGTGYCQLVLNEVCMATRIVQTSLRTEAAVKAVGT 177

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +++            G  E+     +I+  +           E     R + R L  R +
Sbjct: 178 LVTDERAQ-------GGYEIQCLYFDIIGPSSGEFETRITP-ESGPDARARERHLIHRGE 229

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R RI+ + R     + + E + P +  +  EG           + ++  L Q
Sbjct: 230 HGSAILKARGRILRAFRNHFYFKGWTEVTPPTIVNTECEGGSSLFKVDFYGEDAY--LTQ 287

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y + ++ S     + I P +R E   + R   EF  L+ E  F+   D+L  +E+ 
Sbjct: 288 SSQLYLESVI-SALGDVYCILPSYRAEKSNTRRHLSEFTHLETEHPFITFSDLLGIIEDF 346

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +  V  E  N          +  D     +     +L+ P        H    ++     
Sbjct: 347 VISVVTELKNDKQFYPLIQFLNGD----NFDKIASNLKKPFKRMR---HSEGIDWLNAHG 399

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           I   +     +          R   D + E
Sbjct: 400 ITKEDGTAFGYDDDIPEAQE-RKMIDTIGE 428



 Score = 63.9 bits (154), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 80/224 (35%), Gaps = 31/224 (13%)

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIR-------VRLDMQDGDSCFFIAG-DPLKF 409
           ++   + E  N     P+ + LN  N + I         R+   +G       G      
Sbjct: 346 FVISVVTELKNDKQFYPLIQFLNGDNFDKIASNLKKPFKRMRHSEGIDWLNAHGITKEDG 405

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP-FTMPQGGMES 468
            +F  D     AQE  +I+    E  ++  FP             AH   F M +   + 
Sbjct: 406 TAFGYDDDIPEAQERKMIDTIG-EPVFLTHFP-------------AHLKSFYMTRCSDDP 451

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
              +    +     DL+     EI  G +R    E   +AF + G+       R+     
Sbjct: 452 ---SSPDHLLTESVDLLVPTVGEIVGGSMRKWTYEDTYKAFLDAGMPI----ERYYWYLD 504

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             + G  PHGG+  G++R +  LLG   VR+  L+P +    + 
Sbjct: 505 TRKFGGCPHGGMGLGLERFICWLLGIYTVRDTVLYPRAPGLIEP 548


>gi|261327549|emb|CBH10525.1| asparaginyl-trna synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 746

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 100/267 (37%), Gaps = 13/267 (4%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            GDL     G  V + GW HRVR    I F+ +RD  G  QVV   ++  F        E
Sbjct: 306 IGDLPKCKEGEIVHVIGWAHRVRHQSRISFVVLRDGSGYIQVVFGGETEPF------HRE 359

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             L I G +                 EL  ++  I+  ++     V      P+ +    
Sbjct: 360 TSLAIRGRLKHEPKAETELQPP---YELHVEEYAIIGNSDGSIENVITAESSPDKL-LDD 415

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R L +R       +  R  +I + R    ++   E + P L  +  EG           +
Sbjct: 416 RHLVIRGTYGSTTLKVRHELIRAFREYFWSKGMYEVTPPTLVGTQCEGGSTLFDVMYYGK 475

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            ++  L Q+ Q Y +   AS     + +   +R E  ++ R   E+  L++E +    ++
Sbjct: 476 KAY--LTQSSQLYLEACTAS-LGDVYCLLSSYRAEKSKTKRHLSEYTHLEVEYAVCNFEE 532

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +L  +E+++  VF            F+
Sbjct: 533 MLTYIEDLIVSVFNTVIERVGDLIAFM 559



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 8/112 (7%)

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVG 512
             H P  M    M     +D  +      D++  G  E+  G +R    + +++A+   G
Sbjct: 635 MTHFPAEMKSFYMA---RDDHDNRLTESVDVLAPGIGEVVGGSMRMWDYDELMEAYKREG 691

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +        +       + G  PHGG   G++R+++ LL   +VR+  LFP 
Sbjct: 692 LDP----EVYYWYTEQRKYGSTPHGGFGLGLERLLVWLLDLDSVRDACLFPR 739


>gi|300742480|ref|ZP_07072501.1| lysine--tRNA ligase [Rothia dentocariosa M567]
 gi|300381665|gb|EFJ78227.1| lysine--tRNA ligase [Rothia dentocariosa M567]
          Length = 510

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 104/259 (40%), Gaps = 12/259 (4%)

Query: 10  GDLGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
           G+L   D     V + G V  VR  G + F  ++      ++ A       E+ +   ++
Sbjct: 50  GELTAGDETDHVVHVPGRVVFVRNTGKLCFASLQAGTNGDRIQAMLSLN--EVGEQSLAD 107

Query: 69  WVLCID-GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           W   +D G  +  +   + +    G++ +  ++  +   A+ +       ++  E  R +
Sbjct: 108 WKSLVDLGDHVYVTGRVVVSR--RGELSIMVREWRM--AAKSIRPMPVLHKDLNEETRVR 163

Query: 128 YRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSR 185
            R+LDL      +++VK R  I  ++R  +    +IE  TP+L        AR F     
Sbjct: 164 RRYLDLMVRPEARDLVKKRALITRTVRRVLEDHGYIELETPVLQLVHGGATARPFRTHLN 223

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
                   +  A +   +  +  G +R ++I   FR+E   S   P EF  L+   ++ +
Sbjct: 224 AFD-QPMTMRIATELPLKRAVVGGIERVYEIGRVFRNEGVDSTHSP-EFTTLECYEAYAD 281

Query: 246 QDDILNTMENVLRGVFEEF 264
           Q  +   M+ ++    +E 
Sbjct: 282 QYVMAERMQEIIVACAQEL 300



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 16/103 (15%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPP 535
             +DL+  G E  +         +  +  +         ++          RA + G PP
Sbjct: 405 EAWDLIIGGMERGTAFSELIDPVIQRERLTEQSHKAAAGDDEAMELDEDFLRALEHGAPP 464

Query: 536 HGGIAAGIDRIVMLLLGAKN------------VREVSLFPMSQ 566
            GG+  G+DR++MLL G ++            +RE  LFP+ +
Sbjct: 465 MGGLGLGVDRLIMLLAGEQDPEHPGTVVRQPGIRETILFPLMK 507


>gi|85014451|ref|XP_955721.1| asparagine--tRNA ligase [Encephalitozoon cuniculi GB-M1]
 gi|74621026|sp|Q8SQK8|SYNC_ENCCU RecName: Full=Probable asparaginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|19171415|emb|CAD27140.1| ASPARAGINYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 502

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 60/339 (17%), Positives = 118/339 (34%), Gaps = 42/339 (12%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +  YR+     L   ++G  +R  GWV  VR    I F+++                 ++
Sbjct: 69  LSEYRSIELSKLSKENIGQKIRTFGWVANVRSQSTITFIELY-------AHYRTVKCVYQ 121

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
               +     + + G V     +         + E+  + +EI + A     P+    + 
Sbjct: 122 KKMHLTMCTSMTVYGTVSKNFGKKDAH-----EFEIQVEGVEIYNGAIAPSFPL--NEDS 174

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
             +       L LR       +  R  ++  +R       + E + P +  +  EG    
Sbjct: 175 SVNAILTNGHLGLRTKKRQLFLKARGHLLKIIRDFYFEGEYTEVTPPTMVQTQVEGGSTL 234

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  + ++  L Q+ Q Y + ++ +   R + I P +R E  R+ R   E+  ++ E
Sbjct: 235 FKLDYYGEDAY--LTQSSQLYLETVVPASH-RAYCIMPSYRAEKSRTRRHLSEYTHVEAE 291

Query: 241 MSFVEQDDILNTMENVLRG---------------VFEEFSNGNTVSNNFLRICYDDAIR- 284
           M+ ++ D +++++E ++                 VF EF         F RI Y +AI  
Sbjct: 292 MADIDLDGLISSIEALVSYSMRRFYEEMKSDILSVFPEFEFHKVPRTPFKRIKYSEAIEL 351

Query: 285 -----RYGTDKPDLRNPIIMHNVTEHF----VHSEFRVF 314
                    D  D      + +  E +    V     VF
Sbjct: 352 LKSKGYKKEDNTDFELGDDIPDAAERYLVEVVGDGCPVF 390



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 13/122 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                H PF M +   +               DL+  G  EI  G +R    E +++ F 
Sbjct: 393 HFLVGHKPFYMRKDEND--------KGLTESTDLLFPGIGEILGGSMRQDTYEDLIEGFR 444

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
              I+     + +       + G   HGG   G +R +M L+  ++V E +L+P   + C
Sbjct: 445 RENINI----DPYYWYLDMARFGPCKHGGYGLGFERFLMGLMRYESVDEATLYPRKVSRC 500

Query: 570 DL 571
             
Sbjct: 501 QP 502


>gi|327298437|ref|XP_003233912.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326464090|gb|EGD89543.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 567

 Score =  144 bits (362), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 65/307 (21%), Positives = 122/307 (39%), Gaps = 26/307 (8%)

Query: 20  FVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIA--KSVRSEWVLCIDGL 76
            V L G +   R  G  ++F D+  +    QV+ N           +  +  + L   G 
Sbjct: 107 TVVLHGRIRSQRTAGKKLVFFDLVHNGHKVQVLCNQRVVGEAGISPEKFKEFYHLLRRGD 166

Query: 77  VMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLD-LR 134
             S + +    +   G++ +   ++ +++S           E E         R ++ L 
Sbjct: 167 SFSVTGKPHRTS--RGELTVKTTELPKLISPCLHDVPVHQKELEISPY----ERHVEFLS 220

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYA 193
             +    +  R+ I +SMR    +  F+E +TPIL + S    A+ F+  +        +
Sbjct: 221 SPSAANILRARSLITHSMRNFFASREFMEVNTPILASKSGGAIAQPFVTSATEFPDRPLS 280

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ + + L+  GFDR F+I P FR+E       P EF   +   +F + + ++ T 
Sbjct: 281 LRIAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP-EFTTCEFYQAFADLESLIETT 339

Query: 254 ENVLRGVFEEFSNGNT------------VSNNFLRICYDDAIR-RYGTDKPDLRNPIIMH 300
           E++L  +  +    N              +  + R+ +  AI    G   PDL++   + 
Sbjct: 340 ESLLSTLAIDVQQLNKKLNNSLSPTTVSFTGPYRRVDFIPAIEAAIGRKLPDLQSGNALS 399

Query: 301 NVTEHFV 307
            V E F 
Sbjct: 400 QVKEIFA 406



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 7/111 (6%)

Query: 459 FTMPQGG-----MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG- 512
           F M          +S +      I + + +L   G EI +     +      + F     
Sbjct: 439 FIMNHPECMSPLSKSYRHPGNGQIVSARAELFVEGKEIMNMYEEENSPFEQRRKFHQQLS 498

Query: 513 -ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               E       G  +  + G+PP GG   GIDR+ ML  GA+ + +V  F
Sbjct: 499 FRDPENAGELDEGYLQTLEWGLPPTGGWGCGIDRLCMLFTGARRISDVLSF 549


>gi|314917261|gb|EFS81092.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
          Length = 494

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 109/291 (37%), Gaps = 14/291 (4%)

Query: 2   HRYRTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV--VANPDS 56
            +Y T   G+L +    +    V + G V  VR  G + F  ++D +  T          
Sbjct: 34  QKY-TDDTGELTLAPGEETTDEVTVGGRVVFVRNTGKLCFASLQDGFTETSNGERLQIML 92

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           +  E+     + W   +D L               G++ + A +  + S A      +  
Sbjct: 93  SKAEVGDESLAAWKSDVD-LGDHVWVRGRVVVSRRGELSIMAAEWRMASKALRPLPTL-- 149

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSP 174
            +E  E  R + R+ DL      + +V+ R  I  ++R  +    F+E  TPIL      
Sbjct: 150 HKELSEESRVRRRYADLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPILQLVHGG 209

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F            +L  A + Y +  M  G DR +++   FR+E   S     EF
Sbjct: 210 AAARPFNTHLNAFDIDM-SLRIALELYLKRTMVGGTDRVYEMGRVFRNEGIDSS-HSAEF 267

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             L+  MS+  Q  I   +++++  V +   + + +      I  D   R 
Sbjct: 268 SMLEAYMSWGNQFTIAEVIKDIIMAVADAL-DVHQIETPKGTIDLDGQWRW 317



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 28/157 (17%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             A      +  EL  +        ++ D+P        + +   H              
Sbjct: 356 WEAGKVVMELFGEL--VEPGLINPTFVCDYP-----AIAQPLARPHR------------- 395

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLY 526
            +D   ++A  +DL+  G E  +G  +     +  +  +   ++                
Sbjct: 396 -DDPRMVEA--WDLIIGGMERGTGFSQLVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFL 452

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + G PP GG+  G+DR+VML   A  +RE  LFP
Sbjct: 453 EALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFP 488


>gi|310790050|gb|EFQ25583.1| lysyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 531

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 102/249 (40%), Gaps = 12/249 (4%)

Query: 19  SFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVAN---PDSACFEIAKSVRSEWVLCID 74
             V L G V  +R HG  ++F+ I + +   Q + N    D+       S +    L   
Sbjct: 50  EVVTLYGRVQSIRLHGNRLVFVTIVNEFEKIQGMVNYRNLDNLPDMTLDSFKLFARLIEK 109

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G  +S + +       TG++ + A    +L       +    +       + + R +D+ 
Sbjct: 110 GDHISITGKP--TRTSTGELTIQA---VVLPELLSPAMEQIPQTLTDPETKSRKRHVDMI 164

Query: 135 RDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
            +    +I++ R+ I   MR     ++F+E  TPIL  ++    AR F   +        
Sbjct: 165 VNPEVADILRLRSHITKYMRDYFHEQSFLEFQTPILAENAGGAVARSFTTQATEFPSKEL 224

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           +L  AP+ + + L+  G  + F+I P FR+E       P EF   +   ++    +++  
Sbjct: 225 SLRIAPELWLKRLVVGGVHKVFEIGPAFRNEGIDGTHNP-EFTMCEFYSAYTNLPELIAR 283

Query: 253 MENVLRGVF 261
            E +L G+ 
Sbjct: 284 TEELLAGLA 292



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 17/137 (12%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           + E    E  +   H+P  M      S      L + + + +L  NG E+A+     +  
Sbjct: 377 YLEPKSFEGPLFITHHPTCMSPLAK-SFVCPATLQLVSARTELFVNGRELANMYEEENDP 435

Query: 502 EVMLQAFSNVGI----------------SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
               +  +                                 RA + G+PP GG   G++R
Sbjct: 436 AAQARKLAEHRFFGTGKDQALLEDKDEPHPHRDAPLDKSYIRALEAGLPPTGGWGCGVER 495

Query: 546 IVMLLLGAKNVREVSLF 562
           +VML  GA  + +   F
Sbjct: 496 LVMLFSGANRISDCLSF 512


>gi|313828964|gb|EFS66678.1| lysyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|315109927|gb|EFT81903.1| lysyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
          Length = 494

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 109/291 (37%), Gaps = 14/291 (4%)

Query: 2   HRYRTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV--VANPDS 56
            +Y T   G+L +    +    V + G V  VR  G + F  ++D +  T          
Sbjct: 34  QKY-TDDTGELTLAPGEETTDEVTVGGRVVFVRNTGKLCFASLQDGFTETSNGERLQIML 92

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           +  E+     + W   +D L               G++ + A +  + S A      +  
Sbjct: 93  SKAEVGDESLAAWKSDVD-LGDHVWVRGRVVVSRRGELSIMAAEWRMASKALRPLPTL-- 149

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSP 174
            +E  E  R + R+ DL      + +V+ R  I  ++R  +    F+E  TPIL      
Sbjct: 150 HKELSEESRVRRRYADLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPILQLVHGG 209

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F            +L  A + Y +  M  G DR +++   FR+E   S     EF
Sbjct: 210 AAARPFNTHLNAFDIDM-SLRIALELYLKRTMVGGTDRVYEMGRVFRNEGIDSS-HSAEF 267

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             L+  MS+  Q  I   +++++  V +   + + +      I  D   R 
Sbjct: 268 SMLEAYMSWGNQFTIAEVIKDIIMAVADAL-DVHQIETPKGTIDLDGQWRW 317



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 28/157 (17%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             A      +  EL  +        ++ D+P        + +   H              
Sbjct: 356 WEAGKVVMELFSEL--VEPGLINPTFVCDYP-----AIAQPLARPHR------------- 395

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLY 526
            +D   ++A  +DL+  G E  +G        +  +  +   ++                
Sbjct: 396 -DDPRMVEA--WDLIIGGMERGTGFSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFL 452

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + G PP GG+  G+DR+VML   A  +RE  LFP
Sbjct: 453 EALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFP 488


>gi|313764813|gb|EFS36177.1| lysyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313772713|gb|EFS38679.1| lysyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313803367|gb|EFS44549.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313807056|gb|EFS45554.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313811194|gb|EFS48908.1| lysyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313815623|gb|EFS53337.1| lysyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|313817841|gb|EFS55555.1| lysyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313821333|gb|EFS59047.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313824726|gb|EFS62440.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313826390|gb|EFS64104.1| lysyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|313832195|gb|EFS69909.1| lysyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834312|gb|EFS72026.1| lysyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|313839468|gb|EFS77182.1| lysyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314916420|gb|EFS80251.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314921636|gb|EFS85467.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314926368|gb|EFS90199.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314930718|gb|EFS94549.1| lysyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314955165|gb|EFS99570.1| lysyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314959359|gb|EFT03461.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314961533|gb|EFT05634.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314964076|gb|EFT08176.1| lysyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314969185|gb|EFT13283.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|314974409|gb|EFT18504.1| lysyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976959|gb|EFT21054.1| lysyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314980053|gb|EFT24147.1| lysyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314985404|gb|EFT29496.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|314986908|gb|EFT31000.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314990599|gb|EFT34690.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315081802|gb|EFT53778.1| lysyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315086497|gb|EFT58473.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315088210|gb|EFT60186.1| lysyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315097241|gb|EFT69217.1| lysyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|315099567|gb|EFT71543.1| lysyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315102202|gb|EFT74178.1| lysyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315107524|gb|EFT79500.1| lysyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|327331244|gb|EGE72983.1| lysine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327333873|gb|EGE75590.1| lysine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327444660|gb|EGE91314.1| lysyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|327447380|gb|EGE94034.1| lysyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|327450434|gb|EGE97088.1| lysyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327454452|gb|EGF01107.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327456519|gb|EGF03174.1| lysyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328756216|gb|EGF69832.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328758164|gb|EGF71780.1| lysyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328758595|gb|EGF72211.1| lysyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
 gi|328759561|gb|EGF73167.1| lysine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 494

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 109/291 (37%), Gaps = 14/291 (4%)

Query: 2   HRYRTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV--VANPDS 56
            +Y T   G+L +    +    V + G V  VR  G + F  ++D +  T          
Sbjct: 34  QKY-TDDTGELTLAPGEETTDEVTVGGRVVFVRNTGKLCFASLQDGFTETSNGERLQIML 92

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           +  E+     + W   +D L               G++ + A +  + S A      +  
Sbjct: 93  SKAEVGDESLAAWKSDVD-LGDHVWVRGRVVVSRRGELSIMAAEWRMASKALRPLPTL-- 149

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSP 174
            +E  E  R + R+ DL      + +V+ R  I  ++R  +    F+E  TPIL      
Sbjct: 150 HKELSEESRVRRRYADLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPILQLVHGG 209

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F            +L  A + Y +  M  G DR +++   FR+E   S     EF
Sbjct: 210 AAARPFNTHLNAFDIDM-SLRIALELYLKRTMVGGTDRVYEMGRVFRNEGIDSS-HSAEF 267

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             L+  MS+  Q  I   +++++  V +   + + +      I  D   R 
Sbjct: 268 SMLEAYMSWGNQFTIAEVIKDIIMAVADAL-DVHQIETPKGTIDLDGQWRW 317



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 28/157 (17%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             A      +  EL  +        ++ D+P        + +   H              
Sbjct: 356 WEAGKVVMELFGEL--VEPGLINPTFVCDYP-----AIAQPLARPHR------------- 395

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLY 526
            +D   ++A  +DL+  G E  +G        +  +  +   ++                
Sbjct: 396 -DDPRMVEA--WDLIIGGMERGTGFSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFL 452

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + G PP GG+  G+DR+VML   A  +RE  LFP
Sbjct: 453 EALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFP 488


>gi|85000937|ref|XP_955187.1| aspartyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65303333|emb|CAI75711.1| aspartyl-tRNA synthetase, putative [Theileria annulata]
          Length = 629

 Score =  143 bits (361), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 72/338 (21%), Positives = 134/338 (39%), Gaps = 35/338 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-----FEIAK 63
             DL  S +   + + G +H +R  GGI FL +R    + Q V +  S        +   
Sbjct: 34  IKDLDNS-INKNIWIRGRIHELRGKGGICFLILRQQRELLQCVIDSKSENNTKDMVKWTS 92

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQI-------ELSAQKIEILSVAEELPLPVFG 116
           ++  E ++ + G V+  +   ++    +  I       EL+  KI  +S +      +  
Sbjct: 93  TLSFESIVDVYGKVVVPNMPILSTTSSSKLINFLLNLDELNVSKIFCISKSSTNLPFLLR 152

Query: 117 ER---------------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENF 161
           +                +  +  R   R LDLR    +     ++ +    R  +++ +F
Sbjct: 153 DANNTDNEEYTNNPNVIKVNQDTRLDNRALDLRCFMNNIIFKIQSIVCQLYREFLLSNDF 212

Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           IE  TP L + S EG           Q +   L Q+PQ YKQ+ +     R F+I P FR
Sbjct: 213 IEIHTPKLLSGSSEGGSSVFKFKYFEQDA--CLAQSPQLYKQMAICGDLKRVFEIGPVFR 270

Query: 222 DEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
            E+  + R   E+  LD+EM       +++N ++ +L+ VF    N N + N F ++   
Sbjct: 271 AENSNTHRHLCEYVGLDLEMELKNNYMEVVNLIDEMLKFVFNGLKNSNEI-NYFYKLNPS 329

Query: 281 DAIRRYGTDKPDLRNPI---IMHNVTEHFVHSEFRVFS 315
               ++    P +       +++ + E         F+
Sbjct: 330 IQPFQFLNQTPKITFQQAVEMLNEIVEIPKDLNEYDFT 367



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 4/93 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            +I +  YD    G EI SG  R H SE + +     GI    +++      + F+    
Sbjct: 495 RTIWSRSYDFFMRGEEILSGAQRIHDSEELEKRAKECGIDVNTIKD----YIQVFKYASF 550

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           PH G   G++R+VML LG  N+R+ S+FP    
Sbjct: 551 PHAGAGIGLERVVMLFLGLTNIRKTSMFPRDPK 583


>gi|315082875|gb|EFT54851.1| lysyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
          Length = 494

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 62/291 (21%), Positives = 110/291 (37%), Gaps = 14/291 (4%)

Query: 2   HRYRTHSCGDLGV---SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQV--VANPDS 56
            +Y T + G+L +    +    V + G V  VR  G + F  ++D +  T          
Sbjct: 34  QKY-TDATGELTLAPGEETTDEVTVGGRVVFVRNTGKLCFASLQDGFTETSNGERLQIML 92

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           +  E+     + W   +D L               G++ + A +  + S A      +  
Sbjct: 93  SKAEVGDESLAAWKSDVD-LGDHVWVRGRVVVSRRGELSIMAAEWRMASKALRPLPTL-- 149

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILT-ASSP 174
            +E  E  R + R+ DL      + +V+ R  I  ++R  +    F+E  TPIL      
Sbjct: 150 HKELSEESRVRRRYADLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPILQLVHGG 209

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             AR F            +L  A + Y +  M  G DR +++   FR+E   S     EF
Sbjct: 210 AAARPFNTHLNAFDIDM-SLRIALELYLKRTMVGGTDRVYEMGRVFRNEGIDSS-HSAEF 267

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
             L+  MS+  Q  I   +++++  V +   + + +      I  D   R 
Sbjct: 268 SMLEAYMSWGNQFTIAEVIKDIIMAVADAL-DVHQIETPKGTIDLDGQWRW 317



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 28/157 (17%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             A      +  EL  +        ++ D+P        + +   H              
Sbjct: 356 WEAGKVVMELFGEL--VEPGLINPTFVCDYP-----AIAQPLARPHR------------- 395

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLY 526
            +D   ++A  +DL+  G E  +G        +  +  +   ++                
Sbjct: 396 -DDPRMVEA--WDLIIGGMERGTGFSELVDPVIQREVLTKQSLAAAAGDPEAMQLDEDFL 452

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + G PP GG+  G+DR+VML   A  +RE  LFP
Sbjct: 453 EALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFP 488


>gi|289615277|emb|CBI58044.1| unnamed protein product [Sordaria macrospora]
          Length = 588

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 61/354 (17%), Positives = 120/354 (33%), Gaps = 57/354 (16%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + G++  VR      F+ + D   +  + A         A+ +     + + G  ++ 
Sbjct: 117 VVVQGYIRSVRGMKTHRFVSLGDGSSLAPLQAVV-PVDTNQAEGLAIGAAVRLTGKWVAS 175

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                     +   E+    ++IL  ++    P+  + + PE +R     L  R      
Sbjct: 176 PG-------ASQSHEMQVTHVDILGPSDAKTFPIQKKYQTPEYLR-TIPHLRPRTPINAA 227

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV----------NQGS 190
            +  R+  + ++       +F +   PILT+S  EGA +    +            N+  
Sbjct: 228 LLKMRSEAVAALTRFFADHDFTQTHPPILTSSDCEGAGEVFTVAPASNIAELTDEDNKSK 287

Query: 191 FYA----LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-E 245
            +           Q     +A      + ++P FR E   + R   EFY L+ EMSFV +
Sbjct: 288 MFFRNKKYLTVSTQLHLEALAQSVGNVWTLSPVFRAEKSDTARHLSEFYMLEAEMSFVND 347

Query: 246 QDDILNTMENVLRGV---------FEEFSNGN-------------------TVSNNFLRI 277
            D++++  E+++R +           EF N                      ++  + R+
Sbjct: 348 LDEVMDLAEDMIRNMCITMYESHTVHEFLNREGRVGSDLVSPEEVNARWEGMMAAEWPRL 407

Query: 278 CYDDAIRRYGTDKPDLR-NPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
            Y DAI             P+     TE       +  ++ +       V   P
Sbjct: 408 TYTDAIEFLQEHADKFEHKPVW----TEGLHSEHEKFIAEQIGDGKPVFVTHYP 457


>gi|297171358|gb|ADI22362.1| lysyl-tRNA synthetase (class II) [uncultured nuHF2 cluster
           bacterium HF0500_02A10]
          Length = 302

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 89/247 (36%), Gaps = 38/247 (15%)

Query: 5   RTH-SCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
           R+H +C  + + D              V ++G +   R HG   F  I D  G  Q+   
Sbjct: 41  RSHLTCDAMALFDQNETEGSLDEDSIYVSVAGRLLSYRSHGKSAFGHIEDRSGQIQIYLK 100

Query: 54  PD---SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
            D      F +   +     + ++G +             TG+I +  ++  +L+ +   
Sbjct: 101 KDILGDDNFGVLDLLDLGDWIGVEGSL---------FRTRTGEITIQVKEWALLAKSLRP 151

Query: 111 PLPVFGERE------------YPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMI 157
                 E +              +  R++ R+ DL    ++ +    R +II  +R  + 
Sbjct: 152 LPLGKTEIDREKGDATTFSGLTDKEARYRQRYADLAVNPSVREVFRTRAKIIAELRSFLD 211

Query: 158 AENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216
              F+E  TP L        AR F+          Y L  A + Y + L+  G ++ ++I
Sbjct: 212 ELGFLEVETPALQPLYGGAAARPFVTKHNKLDRDLY-LRIADELYLKRLIVGGLEKVYEI 270

Query: 217 APCFRDE 223
              FR+ 
Sbjct: 271 XXDFRNG 277


>gi|70937148|ref|XP_739420.1| asparagine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56516407|emb|CAH80476.1| asparagine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 458

 Score =  143 bits (361), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 65/458 (14%), Positives = 131/458 (28%), Gaps = 97/458 (21%)

Query: 19  SFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSE--WVLCIDG 75
             V + GW   VR  GG   F+++ D      +    +       K ++          G
Sbjct: 1   QLVVVCGWSKAVRQGGGRFCFVNVNDGSCHLNLQIVVNQNIENYDKLLKCGIGCCFRFTG 60

Query: 76  LVMSRSAETINANIITGQ-IEL-----SAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            ++    +      +  + +EL     S    EI     +       ++ + +    +  
Sbjct: 61  TLILSPVQNTEKKGLLNENVELTLTDNSIHSFEIYGENLDPQKYPLSKKNHGKEFLREVA 120

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-- 187
            L  R   +   +  R  ++ S      +  FI   TP++T S  EG  +    + +   
Sbjct: 121 HLRPRSYFISSVMRIRNALMVSTHLFFQSRGFICIQTPLITTSDCEGGGEMFTVTTLLNE 180

Query: 188 ---------------------------------------------QGSFY---ALPQAPQ 199
                                                        +  F+   A      
Sbjct: 181 NGDISAIPKTKKKTSNNQTVKREDQTANEPIANTTNNTNEYVIDYKKDFFSKQAFLTVSG 240

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
           Q     + S     +   P FR E   + R   EF+ ++ EM+F +  D +   E  ++ 
Sbjct: 241 QLSLENLCSSMGDVYTFGPTFRAESSHTSRHLAEFWMIEPEMAFADIYDNMEVAEAYIKY 300

Query: 260 VFEEFSNGNTVSNN---------------------FLRICYDDAIRRYGTDKPDLRNPII 298
                 + +                          F +I Y +AI        +   P+ 
Sbjct: 301 CIRYVLDNHFHDIYYFEENVEKGLIDRLKNILNDDFAKITYTNAIDLLTKYSTNFDVPVK 360

Query: 299 --MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
             M   +EH      ++F K         V+  P           D          Q  +
Sbjct: 361 WGMDLQSEHERFIAEQIFKKP------VIVYNYPKDLKAFYMKLNDD---------QKTV 405

Query: 357 AYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
           A +   + + G V G      +L +++   +  +L+++
Sbjct: 406 AAMDVLVPKIGEVIGGSQREDNLELLDKMIVEKKLNIE 443


>gi|320033392|gb|EFW15340.1| aspartyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 922

 Score =  143 bits (360), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 70/368 (19%), Positives = 126/368 (34%), Gaps = 59/368 (16%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH-----YGITQVVANPDSACFEIAKSV 65
           +     G  +     +H VR  G  ++FL  R         +T+          + A+ +
Sbjct: 122 ITPDMAGQEITFRARLHVVRRMGQKLVFLVFRQQVITLQGVLTEKKGEISILMIQWAEHI 181

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------ 119
           R   +L + G++       I   +    +E+  Q+I ++   EE       E E      
Sbjct: 182 RVGSILKVKGVIRKPEVPVIGTTMH--DLEVHIQEIHVIVRREEPIPFSVYEAELPAVEE 239

Query: 120 ---------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                     P+  R   R LDLR DT       ++ I +  R  + +  FIE  TP L 
Sbjct: 240 EKIEGRRTRVPDRTRLSNRILDLRTDTSQSIFRIQSVISSYFRSTLDSMGFIEIHTPKLQ 299

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            ++ E                          KQ+ +AS F+R ++I   FR E+  + R 
Sbjct: 300 GAATESGASVFS-----------------LAKQMAIASDFERVYEIGAVFRAENSNTHRH 342

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVS----------------NN 273
             E+  LD+EM+  E   + L  ++ V++ +FE     +                   + 
Sbjct: 343 LTEYTGLDIEMAIEEHYHESLEVIDQVIKKIFEVIYGKHRREVQIVKHQFPSEDLVWLDK 402

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
              I + + IR          +   + ++ +     E R+    L     +  + I  K 
Sbjct: 403 TPIITFSEGIRMLNESGWRTEDGKELSDLEDISTRDEIRL--GELVKEKYHTDYYIMDKF 460

Query: 334 GGGNRAFC 341
               R F 
Sbjct: 461 PASARPFY 468



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 30/162 (18%)

Query: 417 RNHIAQELG-IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           R+ I   LG ++        +IMD           K   +  PF       ++   N   
Sbjct: 437 RDEI--RLGELVKEKYHTDYYIMD-----------KFPASARPFYAMPDPNDNRFTN--- 480

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
                 YD+   G EI SGG R H   ++ +    +G+    +E         FQ G+PP
Sbjct: 481 -----AYDIFVRGQEIVSGGQRIHNPIMLEERMRQMGVDPASMEE----YMEGFQWGVPP 531

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLF---PMSQNFCD-LLM 573
           H G   G++R++ML+L   N+R  S+F   P S    D  ++
Sbjct: 532 HAGAGIGLERMLMLILKLGNIRLASMFHRDPKSFPAQDQPMV 573


>gi|332373956|gb|AEE62119.1| unknown [Dendroctonus ponderosae]
          Length = 461

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 67/307 (21%), Positives = 110/307 (35%), Gaps = 34/307 (11%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L    +G  V + GW+  +R    + FLDI D      +            K+V    V 
Sbjct: 26  LNDDKLGQHVFIQGWIKALRKQKEVTFLDINDGSTPKSLQIVSSK------KNVPKVTVG 79

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130
                  S SA  +      GQ E+SA  ++++   + E   P    + Y      +Y  
Sbjct: 80  A------SVSASGLLKQTAKGQNEVSATSVKMIGECDLEKGYPFAPRKRYEPQYVREYLH 133

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL--VPSRV-- 186
           L  R  T    +  R     ++   +   ++I   TPI+TA+  EGA +    VP     
Sbjct: 134 LRPRTKTFASVLRLRHAAYLAIHNYLHQNHYINIHTPIITANDCEGAGETFKVVPDNEQL 193

Query: 187 ----------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
                        +++   A      Q      A   ++ +   P FR E+  S     E
Sbjct: 194 LKNMAKKDVPFDNAYFDTKAYLTVSGQLHLEAAAHALNKVYCFGPTFRAENSISRFHLSE 253

Query: 234 FYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           FY L++E +F  + DD+L+ +E +++ V  +    N         C    I     DK  
Sbjct: 254 FYMLELEQAFLDDLDDLLDVVEKMIKHVTADLLEHNFSDLET---CSQQKIEYSWIDKEF 310

Query: 293 LRNPIIM 299
            R P   
Sbjct: 311 KRIPHEE 317



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 56/152 (36%), Gaps = 30/152 (19%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
             E+ + +       +I+++P     +EEK       PF M Q   + +           
Sbjct: 339 GDEVALTHYFGHVPVFIINWP-----KEEK-------PFYMKQINDDQVA---------- 376

Query: 481 QYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
            +DL+     EI  G +R +  E +               ++        + G  P GG 
Sbjct: 377 AFDLLAPSVGEIVGGSLRENSYEKLKAQI-------PESNSQLDWYLDLRRFGSVPTGGF 429

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             G +R + L+LG + +++   FP   + C L
Sbjct: 430 GMGFERYLQLVLGVQTIKDCIPFPRWPHNCKL 461


>gi|157875933|ref|XP_001686332.1| asparaginyl-trna synthetase [Leishmania major strain Friedlin]
 gi|68129406|emb|CAJ07947.1| putative asparaginyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 890

 Score =  143 bits (360), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 64/344 (18%), Positives = 115/344 (33%), Gaps = 20/344 (5%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+L     G+ V + GW HRVR    + F+ +RD  G  Q V +  +  F        E
Sbjct: 450 IGELLSHKEGACVYVVGWAHRVRHQSRMSFVVLRDGTGFIQCVFDGSTEPFH------RE 503

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + I G +                +EL   +  ++  ++     V    E      +  
Sbjct: 504 SCVAIRGTLRHEPKAKSELQPP---MELHVDEYAVVGDSDGTIETVIT-AESSVDKLYDQ 559

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R + +R       +  R  ++   R    + ++ E + P L  +  EG           +
Sbjct: 560 RHVVVRGTLASSVLKVRHELLRVFREHFWSRHYYEVTPPTLVQTQVEGGSTLFEVLYYGE 619

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            ++  L Q+ Q Y + + AS     +   P +R E  ++ R   EF  L+ E      +D
Sbjct: 620 TAY--LTQSSQLYLESVTAS-LGNVYCCVPSYRAERSKTKRHLSEFTHLEAEYDVCSFED 676

Query: 249 IL----NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +L    +    V+R V E   +   + N    I  +  +R     K     P       E
Sbjct: 677 LLNHLEDMFCTVIRTVIERVGDLVAMLNPSQLIDPNGNVRDPANYKFTPTRPFRRLRYAE 736

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
                         +  P      I  +     RA   ++ E+ 
Sbjct: 737 AIQFCNENGILNTETGKPFEFGDDITDQPE---RAMVAKLGEFV 777



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 7/136 (5%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGG 495
           I D P      +  +  F  + F          +  D         D++  G  E+  G 
Sbjct: 761 ITDQPERAMVAKLGEFVFMTH-FPASMKSFYMQRDPD-DPTLTESVDVLAPGIGEVLGGS 818

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           +R +  + +L A+   G+        +       + G  PHGG   G++R+++ +L   +
Sbjct: 819 MRMYKYDELLDAYKREGLDAST----YYWYTDQRRYGGAPHGGFGLGVERLLVWMLNLDS 874

Query: 556 VREVSLFPMSQNFCDL 571
           V++  L+P     C  
Sbjct: 875 VKDACLYPRYMGRCKP 890


>gi|253579111|ref|ZP_04856382.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850054|gb|EES78013.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 448

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 64/307 (20%), Positives = 115/307 (37%), Gaps = 19/307 (6%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           +G + +     + G VH +R  G + F+ +R   G+ Q V   + A   I   ++    +
Sbjct: 24  VGNNLLNQEAVIEGAVHSIRNMGDVAFIILRRREGLFQTVYENEMANVSI-HELKEAMTI 82

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--VFGEREYPESIRFKYR 129
            + G++                 EL  + I+ILS   E         +       +  YR
Sbjct: 83  RVKGILHEEERAPHGR-------ELRIRHIDILSTPAEPLPMAIDKWKLNTSLEAKLNYR 135

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            + LR          +  +  + R  +  + F E  TP + A   EG  +    S  ++ 
Sbjct: 136 PISLRNIQERSKFKIQEALTKAFRDYLYGQGFTEIHTPKIGARGAEGGANLFKFSYFHKP 195

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDD 248
           +  A  Q+PQ YKQ +M   FDR F+  P FR E   + R   E+  LD EM +++  ++
Sbjct: 196 AVLA--QSPQFYKQ-MMVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGYIDSFEE 252

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I+      L+                L++   D      +  P +R  +    V++ +  
Sbjct: 253 IMAMETGFLQYAMNLLKTEYAKEVQILKLDIPDV-----SKIPAVRFDVAKELVSQKYNR 307

Query: 309 SEFRVFS 315
                F 
Sbjct: 308 KIRNPFD 314



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 26/140 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEI 491
           +F ++  +P                PF            +D    +    +DL+  G EI
Sbjct: 334 DFVFVTHYP------------SKKRPFYAM---------DDPEDARFTLSFDLLFKGLEI 372

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
            +GG R H   +++Q   + G+++E +E         F+ GMPPHGG+  G++R+ M L+
Sbjct: 373 TTGGQRIHDYNMLVQKIEDRGMTQEGMEQ----YLDTFKHGMPPHGGLGIGLERLTMQLI 428

Query: 552 GAKNVREVSLFPMSQNFCDL 571
           G +NVRE  LFP   N  + 
Sbjct: 429 GEENVRETCLFPRDMNRLEP 448


>gi|72387914|ref|XP_844381.1| asparaginyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62358589|gb|AAX79049.1| asparaginyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70800914|gb|AAZ10822.1| asparaginyl-tRNA synthetase, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 746

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 100/267 (37%), Gaps = 13/267 (4%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            GDL     G  V + GW HRVR    I F+ +RD  G  QVV   ++  F        E
Sbjct: 306 IGDLPKCKEGEIVHVIGWAHRVRHQSRISFVVLRDGSGYIQVVFGGETEPF------HRE 359

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             L I G +                 EL  ++  I+  ++     V      P+ +    
Sbjct: 360 TSLAIRGRLKHEPKAKAELQPP---YELHVEEYAIIGNSDGSIENVITAESSPDKL-LDD 415

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R L +R       +  R  +I + R    ++   E + P L  +  EG           +
Sbjct: 416 RHLVIRGTYGSTTLKVRHELIRAFREYFWSKGMYEVTPPTLVGTQCEGGSTLFDVMYYGK 475

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            ++  L Q+ Q Y +   AS     + +   +R E  ++ R   E+  L++E +    ++
Sbjct: 476 KAY--LTQSSQLYLEACTAS-LGDVYCLLSSYRAEKSKTKRHLSEYTHLEVEYAVCNFEE 532

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +L  +E+++  VF            F+
Sbjct: 533 MLTYIEDLIVSVFNMVIERVGDLIAFM 559



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 8/112 (7%)

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVG 512
             H P  M    M     +D  +      D++  G  E+  G +R    + +++A+   G
Sbjct: 635 MTHFPAEMKSFYMA---RDDHDNRLTESVDVLAPGIGEVVGGSMRMWDYDELMEAYKREG 691

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +        +       + G  PHGG   G++R+++ LL   +VR+  LFP 
Sbjct: 692 LDP----EVYYWYTEQRKYGSTPHGGFGLGLERLLVWLLDLDSVRDACLFPR 739


>gi|320590914|gb|EFX03355.1| asparaginyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 573

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/301 (19%), Positives = 117/301 (38%), Gaps = 43/301 (14%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V ++G+V  VR      F+ + D   +  + A       ++A  + +   +C+ G  +  
Sbjct: 99  VAVNGFVRSVRSMKSNTFVTLGDGSSLAPLQAVV---PADLADGLANGAAVCLKGSWVPS 155

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                +        EL  + ++IL  ++        + + PE +R     L  R      
Sbjct: 156 PGVGQSH-------ELHVRSVDILGPSDA------KKYQTPEFLRTL-PHLRPRVPFNST 201

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP----------------- 183
            +  R+ +I+S+     + +F++   P++T+S  EGA +                     
Sbjct: 202 LLRLRSNVISSLDRFFTSRDFVQTHPPLITSSDCEGAGEVFTVSAASSASSSSSSSSNSP 261

Query: 184 SRVNQGSFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           S+     F+  P+      Q     +A      + ++P FR E+  + R   EFY L+ E
Sbjct: 262 SKSGDAHFFRSPKYLTVSTQLHLEALAQAVGSVWTLSPTFRAEESDTPRHLSEFYMLEAE 321

Query: 241 MSFVEQDD-ILNTMENVLRGVFEEFSNGNTVSNNFLR----ICYDDAIRRYGTDKPDLRN 295
           + FV++ D +++ +E++LR V  +            R       D A R  G  + D R 
Sbjct: 322 VCFVDRLDGVMDLVEDMLRAVAADVQGNRVADELLARPGGSSTDDLAHRWQGLVQQD-RW 380

Query: 296 P 296
           P
Sbjct: 381 P 381



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 38/110 (34%), Gaps = 11/110 (10%)

Query: 472 NDLLSIKAFQYDL-VCNGFEIASGGIRNHM----------SEVMLQAFSNVGISKEVVEN 520
             + +     +DL V    EIA G +R H             + +              +
Sbjct: 463 QPVSAATVDCFDLLVPEFCEIAGGSMREHRLPELVAAMRSRGMQVAEDGAPSGQDGSSSS 522

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                    + G PPHGG   G DR++  L G + +R+   FP     CD
Sbjct: 523 DLDWYVDLRRWGCPPHGGFGVGFDRLLCYLSGVQTIRDTVAFPRWFGRCD 572


>gi|256062283|ref|XP_002570298.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|227294225|emb|CAY19127.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 218

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 42/148 (28%), Positives = 61/148 (41%), Gaps = 14/148 (9%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
             +    H+ FT            D   +    YDLVCNG  +  G IR H  E      
Sbjct: 84  TSQWKSVHHLFTAASPETAHFLYTDPSKVIGLHYDLVCNGQVVGGGSIRVHNPE------ 137

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
                              A   G PPHGGIA G+D ++ + + AK++R+V  FP + + 
Sbjct: 138 --------DNSCEMEYFLTALNSGAPPHGGIALGLDLLIAIFVNAKSIRDVIAFPKAADG 189

Query: 569 CDLLMGSPSTVSVEQLRELGLRIVENPK 596
            DLL G+P+ V  E L +  + +    K
Sbjct: 190 KDLLCGTPTMVDDEILSQYCISVSNLNK 217


>gi|294790611|ref|ZP_06755769.1| lysine--tRNA ligase [Scardovia inopinata F0304]
 gi|294458508|gb|EFG26861.1| lysine--tRNA ligase [Scardovia inopinata F0304]
          Length = 542

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 107/247 (43%), Gaps = 12/247 (4%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAKSVRSEWVLCI 73
            +    V L+G V  +R  GG+ F+ +    G   Q + +      +  K  +    L  
Sbjct: 95  QETDEVVGLAGRVLFLRNGGGLCFVQLSSGDGARIQGMISRKVVGPDSLKQYKQ---LVD 151

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  +    + I++N  TG++ +     +I S A +    +   +E  E  R +  +L +
Sbjct: 152 LGDHLYIHGKVISSN--TGELSVMVDSWQIASKALQPLPAL--HKELSEEQRTRKPYLGM 207

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSF 191
             D+  +++V+ R ++++S+R       ++E  TP+L  +     AR F         + 
Sbjct: 208 IVDSKARDMVRNRAKVVSSLRRNFDERGYLEAETPMLQTNHGGATARPFETHMNAFDINL 267

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + +  AP+ + + L+  G D+ F+I   FR+E       P EF  ++   ++   D +  
Sbjct: 268 F-MRIAPELFLKRLLVGGIDKVFEINRDFRNEGADGTHAP-EFTMVEAYEAYGTYDTMAE 325

Query: 252 TMENVLR 258
              ++++
Sbjct: 326 LTRSLVQ 332



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 70/204 (34%), Gaps = 31/204 (15%)

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E  ++   G +++ L    T    V       D       +             H+ +  
Sbjct: 357 EWTSITMYGSLSEKLGEEITPETSVDYLASLADKLGVERDEVENH----GKLVEHLWEHF 412

Query: 425 GIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
              + +  +E  ++ DFP      E   +  +H                  ++ +  ++D
Sbjct: 413 YTEDPHTLWEPTFVRDFPV-----ETSPLTKSHR----------------SVAGQVEKWD 451

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGI 539
           L   GFE+A+     +   V  Q F +             +       A   GMPP GG+
Sbjct: 452 LYVRGFELATAYSELNDPVVQRQRFVDQARMALAGDAEAMDIDEDFLEALGVGMPPAGGM 511

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             GIDR+++ L GA  +RE   FP
Sbjct: 512 GMGIDRLLIALTGA-TIRETITFP 534


>gi|145238062|ref|XP_001391678.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS
           513.88]
 gi|134076157|emb|CAK48970.1| unnamed protein product [Aspergillus niger]
          Length = 559

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/298 (20%), Positives = 110/298 (36%), Gaps = 30/298 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFEIAK---SV 65
           D+        V L   V   R     + FL + +    +  V+A  +    ++ K    +
Sbjct: 91  DISDEHYEKEVTLVARVDNARVQSAKLAFLMLRQQGQKLQAVIALAEPISRQMIKYTGGL 150

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--- 122
               ++ + G++   +    +A +     E+  +K+ ++S A ++      + E P    
Sbjct: 151 NVNSIVQVTGIIKKPAVPISSATLSN--HEIHIRKVYMISEAAQMLPMQVKDAERPPPET 208

Query: 123 -----------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
                              R   R LDL+ +T        + +       MI        
Sbjct: 209 SEEGFEVGEDGAPIVTLKTRLDNRVLDLQTETSQAITWISSGVAELFAEYMIKSGSRWIF 268

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP L  ++ EG  +        + ++ A  Q+PQ YKQ+ +A   +  F+IAP FR ED 
Sbjct: 269 TPKLVGAATEGGSNVFEVKYFKKNAYLA--QSPQLYKQMCIAGDMESVFEIAPVFRAEDS 326

Query: 226 RSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
            + R   EF  LD E +F     ++L   EN+L  +  +           ++  Y  A
Sbjct: 327 NTHRHLTEFAGLDFEKTFRGHYHEVLEFAENLLVFILSQLKERYADKIAIIQKSYPKA 384



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/188 (26%), Positives = 76/188 (40%), Gaps = 25/188 (13%)

Query: 384 TEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-F 440
            +   +RL+  DG +    AG D  +   F  D    + ++LG I  + ++  + ++D F
Sbjct: 391 KDGKALRLNYMDGVAMLKEAGVDVSEQERFENDFTTAMEKQLGQIIRDKYDTDFYVLDKF 450

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P             A  PF             D     +  YD    G EI SG  R + 
Sbjct: 451 PM------------AVRPFYTKAC------PQDPR--FSNSYDFFMRGEEIMSGAQRIND 490

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            + + ++    G++    +  F     AF+ G PPH G   G++RIVM  LG  NVR  S
Sbjct: 491 IKELEESMVAKGLNPN--QEGFEDYLSAFRQGCPPHAGGGLGLNRIVMFFLGLPNVRLAS 548

Query: 561 LFPMSQNF 568
           LFP     
Sbjct: 549 LFPRDPQR 556


>gi|156057967|ref|XP_001594907.1| hypothetical protein SS1G_04715 [Sclerotinia sclerotiorum 1980]
 gi|154702500|gb|EDO02239.1| hypothetical protein SS1G_04715 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 530

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 79/382 (20%), Positives = 134/382 (35%), Gaps = 60/382 (15%)

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN------ 273
              +     R      ++DMEM + +   ++  ++ +++ V     +    +++      
Sbjct: 196 PAQKFGPDSRHL----EIDMEMPWADGRRVMRVVQGLVKQVHRVIQDEQIGADHVQFNFT 251

Query: 274 --FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV---FSKILSVNPGYEVWA 328
               R+ Y++A+ ++G+DKPDLR   ++H V      +   +       +     + +  
Sbjct: 252 REIPRVTYEEAMSKHGSDKPDLRIVDLIHRVESVIPENLKGMLTSIENPIIEACKFRLSG 311

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIR 388
            P K     R F D  +  +  +   G   IF   D    + G+            + + 
Sbjct: 312 NPRKVQQFIRNFMDSPDAESFQKNPDGPPGIFV-FDPKRPLEGLQAFG-FEGSEALKHLY 369

Query: 389 VRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE 448
             L              P    +F                                  +E
Sbjct: 370 SSLQSSSH--KIIDPRGPNAATTF----------------------------------DE 393

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
              +     P     GG  +L   D        YDLV NG E+  G  R H +EV     
Sbjct: 394 GDLLILQARPNVRHSGGSTTLVTAD-------HYDLVVNGVELGGGSKRIHSAEVQKFIM 446

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            NV    +   + F  L+ A + G P H G A G DR V +L G ++VR+V  FP     
Sbjct: 447 KNVLKMSDEKMSDFKHLFEALRAGCPTHAGFAIGFDRWVAVLTGRESVRDVIFFPKGNRG 506

Query: 569 CDLLMGSPSTVSVEQLRELGLR 590
            D ++GSP  ++ EQ    GLR
Sbjct: 507 EDAMVGSPGMITKEQEETYGLR 528


>gi|325989609|ref|YP_004249308.1| asparaginyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574694|emb|CBZ40350.1| Asparaginyl-tRNA synthetase [Mycoplasma suis]
          Length = 439

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 102/276 (36%), Gaps = 20/276 (7%)

Query: 1   MHRYRTHSCGDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           M+R  + S  +L      + G    + GWV  ++    + FL + D   ++ + A  D  
Sbjct: 1   MNR-NSISINELLAQSSIERGKEYCIQGWVKTIQTFSSVEFLKVVDGTSLSGIQAVLDGK 59

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
               +K +     + + G++                 EL A  I+ LS   + PL     
Sbjct: 60  NLS-SKDISLGDAIEVKGVLTPSKGG-------KQSFELKATGIKSLSKTTDFPLIP--- 108

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           +E         + +  R D        R  ++ +M       +F     P+LT++S EG 
Sbjct: 109 KELTLDYLRSQQLVRHRTDLFSAVYQIRREVVKAMNDFFYENHFYPSFAPVLTSNSCEGG 168

Query: 178 RDFLVPSRVNQGSFYALPQA----PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            +     +     F+   Q       Q+   ++++G  + F   P FR E   S     E
Sbjct: 169 AELFKLDK-EYNDFFRKEQVLLSVSGQFYCEIISAGLGKSFSFGPTFRSEKSNSHAHLAE 227

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
           F+ +++E SF   + I+ T  N+   +  +  +   
Sbjct: 228 FWMIEVEESFSNLEKIIQTTYNLFNYMLGKVLDNCQ 263



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 57/158 (36%), Gaps = 32/158 (20%)

Query: 421 AQELGIINCNCF------EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             EL   +          +  +I +FP                PF M +           
Sbjct: 307 GDELNKEDEQSLCKLLGTKILFITNFP------------SEQKPFYMTRSED-------- 346

Query: 475 LSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                F +D++  G  E+A G  R    + +  + S + +  + +E       +  + G 
Sbjct: 347 -KKTTFSFDMIVEGVGELAGGSEREGKIDELNSSISEMNLDVKELE----WYLQLRKYGY 401

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
               G   G +R++M L G KN++++S+FP S     L
Sbjct: 402 FSSAGFGMGFERLLMFLTGLKNIKDLSVFPRSYGGFQL 439


>gi|311743345|ref|ZP_07717152.1| lysine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313413|gb|EFQ83323.1| lysine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 502

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 104/283 (36%), Gaps = 11/283 (3%)

Query: 6   THSCGDLGVSD-VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPDSACFEIAK 63
           +H    LG     G  V ++G V  +R  G + F+ +R+  G   Q + +      E   
Sbjct: 52  SHDAEALGADHHTGLQVAVAGRVIFLRNTGKLCFVRLREGDGTELQAMLSLAEVGEERLA 111

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
             ++   L   G  ++ + E I +    G++ + A    +   A+ L           + 
Sbjct: 112 DFKT---LVDIGDHLAVTGEVITSR--RGELSVQATSWTL--AAKTLRPLPNEHTPLSDE 164

Query: 124 IRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            R + R++DL  R    +N+  +  ++ S+R  +    ++E  TP+L  ++   A     
Sbjct: 165 ARSRLRYVDLIVRPEARENVRVKAAVMKSLRSTLDRLGYVEVETPVLQHTNGGAAARPFR 224

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                      L  A + + +  +  G D+ +++A  FR+E   +     EF  L+   +
Sbjct: 225 THVNAFDEPALLRIALELHLKRALVGGIDKVYEMAKTFRNEGVDNTHN-VEFLMLEAYEA 283

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +   D +      ++               +   I  +   R 
Sbjct: 284 YGSYDTMAELTRELVVDAARAVGRTVVTGRDGSTIDLEAEWRH 326



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 65/194 (33%), Gaps = 29/194 (14%)

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
           +    E + V        +        L+    A +    + ++L  +        ++ D
Sbjct: 334 SEAVGETVDVSTPAHHLRTLAARHDVALRDGWDAGEIVLELYEKL--VEHTLIRPTFVRD 391

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           +P     E  + +   H                         +DL+ NG E+A      +
Sbjct: 392 YP-----ESVRPLAKKHR----------------TEPGLVEAWDLIINGVELAPAYSELN 430

Query: 500 MSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
              V  +                 +      RA + GMPP GG+  G+DR+VMLLLG   
Sbjct: 431 DPVVQRERLEEQARLAAAGDPEANDVDEDFLRALEFGMPPAGGLGLGVDRLVMLLLGIG- 489

Query: 556 VREVSLFPMSQNFC 569
           +RE  LFP +Q   
Sbjct: 490 IREAILFP-TQRAE 502


>gi|322502605|emb|CBZ37688.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 890

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 64/344 (18%), Positives = 115/344 (33%), Gaps = 20/344 (5%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+L     G+ V + GW HRVR    + F+ +RD  G  Q V +  +  F        E
Sbjct: 450 IGELPSHKEGACVYVVGWAHRVRHQSRMSFVVLRDGTGFIQCVFDGSTEPFH------RE 503

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + I G +                +EL   +  ++  ++     V    E      +  
Sbjct: 504 SCVAIRGTLRHEPKAKSELQPP---MELHVNEYAVVGDSDGTIETVIT-AESSVDKLYDQ 559

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R + +R       +  R  ++   R    +  + E + P L  +  EG           +
Sbjct: 560 RHVVVRGTLASSVLKVRHELLRVFREHFWSHQYYEVTPPTLVQTQVEGGSTLFEVLYYGE 619

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            ++  L Q+ Q Y + + AS     +   P +R E  ++ R   EF  L+ E      +D
Sbjct: 620 KAY--LTQSSQLYLESVTAS-LGNVYCCMPSYRAERSKTKRHLSEFTHLEAEYDVCSFED 676

Query: 249 ILN----TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +LN        V+R V E   +   + N    I  +  +R     K   + P       +
Sbjct: 677 LLNHLEGMFCTVIRTVIERVGDLVAMLNPSQLIDPNGNVRDPANYKFTPKRPFRRLRYAD 736

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
                         +  P      I  +     RA   ++ E+ 
Sbjct: 737 AIQFCNENGILNTETGKPFEFGEDITDQPE---RAMVAKLGEFV 777



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 7/136 (5%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGG 495
           I D P      +  +  F  + F          +  D         D++  G  E+  G 
Sbjct: 761 ITDQPERAMVAKLGEFVFMTH-FPASMKSFYMQRDPD-DPTLTESVDVLAPGIGEVLGGS 818

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           +R +  + +L A+   G+        +       + G  PHGG   G++R+++ +L   +
Sbjct: 819 MRMYKYDELLDAYKREGLDAST----YYWYTDQRRYGGAPHGGFGLGVERLLVWMLNLDS 874

Query: 556 VREVSLFPMSQNFCDL 571
           V++  L+P     C  
Sbjct: 875 VKDACLYPRYMGRCKP 890


>gi|254582717|ref|XP_002499090.1| ZYRO0E03476p [Zygosaccharomyces rouxii]
 gi|186703793|emb|CAQ43483.1| Zr_YCR024C [Zygosaccharomyces rouxii]
 gi|238942664|emb|CAR30835.1| ZYRO0E03476p [Zygosaccharomyces rouxii]
          Length = 463

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 52/264 (19%), Positives = 103/264 (39%), Gaps = 15/264 (5%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H+   L  S    FV ++GW+  +R    I F+D+RD      +          + +SV+
Sbjct: 6   HTIRALYDSGPQKFVDVNGWIQSIRQLKRIAFIDLRDGTSTKSLKIAVPLCDQSLIESVK 65

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSA----QKIEILSVAEELPLPVFGEREYPE 122
           +   L     V    A+ +         EL      + I+IL            ++ +  
Sbjct: 66  N---LKTGQCVSISQAQWVPTPQREQPFELKVGDALKDIQILGNVTSQYPLQ--KKSHSL 120

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
           S       L  R + L   +  R+ + N+         F + + P++T+S  EG  +   
Sbjct: 121 SFLRTLPHLKHRSNYLGSLLRFRSHVENTFIQFFAQNEFTKVTPPLITSSDCEGGGELFK 180

Query: 183 PSRVNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                   ++   A      Q     ++   +R + ++P FR E   ++R   EF+ L+ 
Sbjct: 181 VD--GSNDYFGRSAYLTVSAQLHLEALSLALNRCYTLSPSFRAEKSDTNRHLCEFWMLEA 238

Query: 240 EMSFV-EQDDILNTMENVLRGVFE 262
           E  FV + +++ +  +N+L+ V +
Sbjct: 239 EWCFVRDVNELTHFTQNLLKSVIK 262



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 25/138 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              ++ D+P     ++ K     H               ND     A  +DL+  G  EI
Sbjct: 347 SPVFVTDYP-----KDCKAFYMKH---------------NDDGQTVAC-FDLLVPGMGEI 385

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R      ++       ++     + +  L +    G  PHGG   G++R+V  L 
Sbjct: 386 VGGSVREDDYIKLVTEMDRRQMNHNGDLDWYAALRQE---GSAPHGGFGLGVERLVSYLY 442

Query: 552 GAKNVREVSLFPMSQNFC 569
           G  N+R+   F  +    
Sbjct: 443 GNHNIRDAIPFHRAATGT 460


>gi|327299364|ref|XP_003234375.1| asparaginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326463269|gb|EGD88722.1| asparaginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 580

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/327 (18%), Positives = 121/327 (37%), Gaps = 28/327 (8%)

Query: 33  HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITG 92
              +IFL + D YG+ Q V   D      A ++  E  + I G + +   +    +    
Sbjct: 170 QKDMIFLTLTDGYGLLQCVFTGDLTKTYDAMTLTLETSMAIHGEMRAVPVKQHAPDNR-- 227

Query: 93  QIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIIN 150
             EL A   +++  A  ++  +      +         R L LR +T    +  R  ++ 
Sbjct: 228 --ELHADFFQVIGRAAGDKEAITTRVAADADPQTLLDNRHLVLRGETSSSVLKVRAAVVR 285

Query: 151 SMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF 210
           + R     +  +E + P +  +  EG           + ++  L Q+ Q Y +  +AS  
Sbjct: 286 AFRKTFEQKQMLEVTPPAMVQTQVEGGSTLFEFDYYGEKAY--LTQSSQLYLETCLAS-L 342

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF--------- 261
              F I P FR E   + R   E+  ++ E+ F+  +D+L+ +E ++  V          
Sbjct: 343 GDVFCICPSFRAEKSLTRRHLSEYTHIESELDFITFNDLLDHIEEIICSVIDISLADPQI 402

Query: 262 ----EEFS-NGNTVSNNFLRICYDDAIRR---YGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
               ++ + N    +  F R+ Y +AI     +G +  + +      ++ E        +
Sbjct: 403 AAFVKQLNPNFTPPARPFRRMRYSEAIEWLNEHGINNEEDKPHSFGDDIAEAAERKMTDI 462

Query: 314 FSKI--LSVNPGYEVWAIPAKGGGGNR 338
            +K   L+  P         K     R
Sbjct: 463 INKPILLTHFPAEIKAFYMKKDAEDPR 489



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 13/122 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M +         D    ++   D++  G  EI  G +R    + ++ A+ 
Sbjct: 471 HFPAEIKAFYMKKDA------EDPRVTESV--DVLMPGVGEIVGGSMRMDDWDELMGAYK 522

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G+        +       + G  PHGG   G++R +  + G   VRE SL+P     C
Sbjct: 523 KEGMDPTP----YYWYTDQRKYGTSPHGGYGLGLERFLAWMCGRYTVRECSLYPRFTGRC 578

Query: 570 DL 571
             
Sbjct: 579 TP 580


>gi|146099196|ref|XP_001468582.1| asparaginyl-trna synthetase [Leishmania infantum]
 gi|134072950|emb|CAM71669.1| putative asparaginyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 890

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 64/344 (18%), Positives = 115/344 (33%), Gaps = 20/344 (5%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+L     G+ V + GW HRVR    + F+ +RD  G  Q V +  +  F        E
Sbjct: 450 IGELPSHKEGACVYVVGWAHRVRHQSRMSFVVLRDGTGFIQCVFDGSTEPFH------RE 503

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + I G +                +EL   +  ++  ++     V    E      +  
Sbjct: 504 SCVAIRGTLRHEPKAKSELQPP---MELHVNEYAVVGDSDGTIETVIT-AESSVDKLYDQ 559

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R + +R       +  R  ++   R    +  + E + P L  +  EG           +
Sbjct: 560 RHVVVRGTLASSVLKVRHELLRVFREHFWSHQYYEVTPPTLVQTQVEGGSTLFEVLYYGE 619

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            ++  L Q+ Q Y + + AS     +   P +R E  ++ R   EF  L+ E      +D
Sbjct: 620 KAY--LTQSSQLYLESVTAS-LGNVYCCMPSYRAERSKTKRHLSEFTHLEAEYDVCSFED 676

Query: 249 ILN----TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +LN        V+R V E   +   + N    I  +  +R     K   + P       +
Sbjct: 677 LLNHLEGMFCTVIRTVIERVGDLVAMLNPSQLIDPNGNVRDPANYKFTPKRPFRRLRYAD 736

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
                         +  P      I  +     RA   ++ E+ 
Sbjct: 737 AIQFCNENGILNTETGKPFEFGEDITDQPE---RAMVAKLGEFV 777



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 7/136 (5%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGG 495
           I D P      +  +  F  + F          +  D         D++  G  E+  G 
Sbjct: 761 ITDQPERAMVAKLGEFVFMTH-FPASMKSFYMQRDPD-DPTLTESVDVLAPGIGEVLGGS 818

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           +R +  + +L A+   G+        +       + G  PHGG   G++R+++ +L   +
Sbjct: 819 MRMYKYDELLDAYKREGLDAST----YYWYTDQRRYGGAPHGGFGLGVERLLVWMLNLDS 874

Query: 556 VREVSLFPMSQNFCDL 571
           V++  L+P     C  
Sbjct: 875 VKDACLYPRYMGRCKP 890


>gi|71660150|ref|XP_821793.1| asparaginyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70887181|gb|EAN99942.1| asparaginyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 745

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 63/269 (23%), Positives = 101/269 (37%), Gaps = 13/269 (4%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GDL     G+ VR+ GW HRVR    + F+ +RD  G  Q V N ++  F       
Sbjct: 303 HRIGDLSSMQEGTKVRVVGWAHRVRHQSRLSFVVLRDGSGYIQAVFNGETEPF------H 356

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  L I G +                 EL   +  I+  ++            P+ +  
Sbjct: 357 RETSLAIRGTLKYEPKAATELQPP---YELHVDEYAIIGNSDGSIENAITPESSPDKL-L 412

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR       I  R  +I + R    + N  E + P L  +  EG          
Sbjct: 413 DDRHLVLRGTYGSTTIKVRHELIRAFREYCWSVNMFEVTPPTLVQAECEGGSTLFDVIYY 472

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
              +   L Q+ Q Y +   +S  D  + I P +R E  ++ R   E+  L++E S  + 
Sbjct: 473 GTTA--HLTQSSQLYLETCTSSVGD-VYCILPSYRAEKSKTRRHLSEYTHLEVEYSICDF 529

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +  L+ +E+++ G F            F+
Sbjct: 530 ELFLSKLEDLIVGAFNRTIERAGDLIAFM 558



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 77/208 (37%), Gaps = 15/208 (7%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +   G +   +N       +   +  D ++  F    P +   +A      +  + GI+N
Sbjct: 548 IERAGDLIAFMNPEQLVDPKA--NPFDPNNWKFAPKKPFRRLKYADA--IKLCNDNGILN 603

Query: 429 CNC---FEF-CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                 F+F   I D P         ++ F  +   + +    +    D    ++   D+
Sbjct: 604 PETNAPFQFGDDITDQPERAMVAILGEMVFMTHFPAVMKSFYMARDPEDPTLTESV--DV 661

Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +  G  EI  G +R    E +++A+    +   V    +       + G  PHGG   G+
Sbjct: 662 LAPGIGEIVGGSMRMWDHEELIEAYRRKDLDPSV----YYWYTEQRKYGSTPHGGFGLGM 717

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R ++ LL   +VRE  LFP     C  
Sbjct: 718 ERFLVWLLNLDSVREACLFPRYMGRCKP 745


>gi|322822542|gb|EFZ28562.1| asparaginyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 745

 Score =  142 bits (358), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 63/269 (23%), Positives = 101/269 (37%), Gaps = 13/269 (4%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           H  GDL     G+ VR+ GW HRVR    + F+ +RD  G  Q V N ++  F       
Sbjct: 303 HRIGDLSSMQEGTKVRVVGWAHRVRHQSRLSFVVLRDGSGYIQAVFNGETEPF------H 356

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E  L I G +                 EL   +  I+  ++            P+ +  
Sbjct: 357 RETSLAIRGTLKYEPKAATELQPP---YELHVDEYAIIGNSDGSIENAITPESSPDKL-L 412

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR       I  R  +I + R    + N  E + P L  +  EG          
Sbjct: 413 DDRHLVLRGTYGSTTIKVRHELIRAFREYCWSVNMFEVTPPTLVQAECEGGSTLFDVIYY 472

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
              +   L Q+ Q Y +   +S  D  + I P +R E  ++ R   E+  L++E S  + 
Sbjct: 473 GTTA--HLTQSSQLYLETCTSSVGD-VYCILPSYRAEKSKTRRHLSEYTHLEVEYSICDF 529

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +  L+ +E+++ G F            F+
Sbjct: 530 ELFLSKLEDLIVGAFNRTIERAGDLIAFM 558



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 77/208 (37%), Gaps = 15/208 (7%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           +   G +   +N       +   +  D ++  F    P +   +A      +  + GI+N
Sbjct: 548 IERAGDLIAFMNPEQMVDPKA--NPCDPNNWKFAPKKPFRRLKYADA--IKLCNDNGILN 603

Query: 429 CNC---FEF-CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                 F+F   I D P         ++ F  +   + +    +    D    ++   D+
Sbjct: 604 PETNAPFQFGDDITDQPERAMVAILGEMVFMTHFPAVMKSFYMARDPEDPTLTESV--DV 661

Query: 485 VCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +  G  EI  G +R    E +++A+    +   V    +       + G  PHGG   G+
Sbjct: 662 LAPGIGEIVGGSMRMWDHEELIEAYRRKDLDPSV----YYWYTEQRKYGSTPHGGFGLGV 717

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R ++ LL   +VRE  LFP     C  
Sbjct: 718 ERFLVWLLNLDSVREACLFPRYMGRCKP 745


>gi|227494387|ref|ZP_03924703.1| lysine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226832121|gb|EEH64504.1| lysine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 521

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 103/257 (40%), Gaps = 15/257 (5%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAKSVRSE-----WVLCIDGL 76
           ++G V  +R  G + F+ ++D  G   QV+ +      +  K+++++     ++      
Sbjct: 75  VAGRVMLMRGSGKLQFVVLQDGEGNRIQVMFSAAEVGLDSLKALKTDVDLGDYLFVYGPA 134

Query: 77  VMSRSAETINANIITGQI---ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           + S+  E     + + +I   +L+A+ I  L            E    E  R + R LD+
Sbjct: 135 IRSKRGELSIFAVPSAEIPAWKLAAKAIRPLPK--TFVSEDGEEMTLSEESRIRRRHLDM 192

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
                 +++V+ R +++ S+R       FIE  TP+L        AR F           
Sbjct: 193 IVRPAARDMVRMRAKVVRSLREYFDQAGFIEIETPMLQNIHGGAAARPFQTHMNAYDTEL 252

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           + L  AP+ + +  +  G ++ F+I   FR+E   S   P EF  L+   ++   D +  
Sbjct: 253 F-LRIAPELFLKRAVVGGIEKVFEINRNFRNEGADSSHSP-EFTMLEAYEAYGTYDTMAQ 310

Query: 252 TMENVLRGVFEEFSNGN 268
                ++    +     
Sbjct: 311 RTREFIQKAARDAFGSE 327



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 26/143 (18%)

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
            + +E  ++ D+P      +   +   H                  L  +  ++DL   G
Sbjct: 400 DHIWEPTFVRDYPV-----DTSPLVRQHR----------------SLPGRVEKWDLYVRG 438

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGID 544
           FE+A+         V  + F    ++    +            A + GMPP GG+  G+D
Sbjct: 439 FELATAYSELVDPVVQRERFEAQALAAANGDPEAMVLDEDFLEAMEQGMPPTGGMGMGLD 498

Query: 545 RIVMLLLGAKNVREVSLFPMSQN 567
           R++M L G   +RE   FP+++ 
Sbjct: 499 RLLMALTGQG-IRETITFPLTKR 520


>gi|325973166|ref|YP_004250230.1| asparaginyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651768|gb|ADX97850.1| asparaginyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 439

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/276 (18%), Positives = 105/276 (38%), Gaps = 20/276 (7%)

Query: 1   MHRYRTHSCGDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA 57
           M+R  + S  +L      + G    + GWV  ++    + FL + D   ++ + A  D  
Sbjct: 1   MNR-NSISINELLAQSSIERGKEYCIQGWVKTIQTFSSVEFLKVVDGTSLSGIQAVLDGK 59

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
               +K +     + + G++                 EL A  I+  S+++    P+  +
Sbjct: 60  NLS-SKDISLGDAIEVKGVLTPSKGG-------KQSFELKATGIK--SLSKTTDFPLIPK 109

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
               + +R +   +  R D        R  ++ +M       +F     P+LT++S EG 
Sbjct: 110 ELTLDYLRSQQ-LVRHRTDLFSAVYQIRREVVKAMNDFFYENHFYPSFAPVLTSNSCEGG 168

Query: 178 RDFLVPSRVNQGSFYALPQA----PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            +     +     F+   Q       Q+   ++++G  + F   P FR E   S     E
Sbjct: 169 AELFKLDK-EYNDFFKKEQVLLSVSGQFYCEVISAGLGKSFSFGPTFRSEKSNSHAHLAE 227

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
           F+ +++E SF   + I+ T  N+   +  +  +   
Sbjct: 228 FWMIEVEESFSNLEKIIQTTYNLFNYMLGKVLDNCQ 263



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 59/172 (34%), Gaps = 32/172 (18%)

Query: 407 LKFCSFAADARNHIAQELGIINCNCF------EFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
             +       +     EL   +          +  +I +FP                PF 
Sbjct: 293 ASYRDCLELLKKSWGDELNKEDEQSLCKLLGTKILFITNFP------------SEQKPFY 340

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
           M +                F +D++  G  E+A G  R    + +  + S + +  + +E
Sbjct: 341 MARSED---------KKTTFSFDMIVEGVGELAGGSEREGKIDKLNSSISEMNLDVKELE 391

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
                  +  + G     G   G +R++M L G KN++++S+FP S     L
Sbjct: 392 ----WYLQLRKYGYFSSAGFGMGFERLLMFLTGLKNIKDLSVFPRSYGGFQL 439


>gi|154336461|ref|XP_001564466.1| asparaginyl-trna synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134061501|emb|CAM38530.1| putative asparaginyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 895

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 98/260 (37%), Gaps = 14/260 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT + G+L      + V + GW HRVR    + F+ +RD  G  Q V +  +  F     
Sbjct: 452 RT-AIGELPSQKESACVYVVGWAHRVRHQSRMSFVVLRDGSGFIQCVFDGSTEPFH---- 506

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
              E  + I G +                +EL   +  I+  ++     +    E     
Sbjct: 507 --RESCIAIRGTLRYEPKAKSELQPP---MELHVHEYAIVGNSDGTIETIIT-AESSVDK 560

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
            +  R +  R       +  R  ++ + R    +  + E + P L  +  EG        
Sbjct: 561 LYDQRHIVARGTVASSVLKVRHELLRAFREYFWSRRYYEVTPPTLVQTQVEGGSTLFDVL 620

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              + ++  L Q+ Q Y + + AS     +   P +R E  ++ R   EF  L++E    
Sbjct: 621 YYGENAY--LTQSSQLYLETVTAS-LGNVYCCLPSYRAEKSKTKRHLSEFTHLEIEYDVC 677

Query: 245 EQDDILNTMENVLRGVFEEF 264
             +D+LN +E+++  V    
Sbjct: 678 SFEDLLNHLEDMICTVIHTV 697



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 61/170 (35%), Gaps = 14/170 (8%)

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
             D ++FC+          +     +        I D P      +  +  F  + F   
Sbjct: 739 YADAIQFCNENGILNTETGKPFEFGDD-------ITDQPERAMVAQMGEFVFMTH-FPAQ 790

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
                 ++ +   +      D++  G  E+  G +R +  + +L A+   G+        
Sbjct: 791 MKSF-YMQRDPADTTLTESVDVLVPGIGEVVGGSMRMYKYDELLDAYKREGLDAST---- 845

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +       + G  PHGG   G++R+++ +L   NV++  ++P     C  
Sbjct: 846 YYWYTDQRRYGGAPHGGFGLGVERLLVWMLNLDNVKDACMYPRYMGRCKP 895


>gi|322495036|emb|CBZ30339.1| putative asparaginyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 884

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 63/344 (18%), Positives = 117/344 (34%), Gaps = 20/344 (5%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+L     G+ V + GW HRVR    + F+ +RD  G  Q V +  +  F        E
Sbjct: 444 IGELPSHKEGACVYVVGWAHRVRHQSRMSFVVLRDGTGFIQCVFDGSTEPFH------RE 497

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + I G +                +EL   +  ++  ++     V    E      +  
Sbjct: 498 SCVAIRGTLRHEPKAKSELQPP---MELHVNEYAVVGDSDGTIETVIT-AESSVDKLYDQ 553

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R + +R       +  R  ++   R    +  + E + P L  +  EG           +
Sbjct: 554 RHIVVRGTLASSVLKVRHELLRVFREHFWSRQYYEVTPPTLVQTQVEGGSTLFEVLYYGE 613

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            ++  L Q+ Q Y + + AS     +   P +R E  ++ R   EF  L++E      +D
Sbjct: 614 KAY--LTQSSQLYLESVTAS-LGNVYCCMPSYRAERSKTKRHLSEFTHLEVEYDVCSFED 670

Query: 249 IL----NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
           +L    + +  V+R V E   +   + N    I  +  +R     K   + P       +
Sbjct: 671 LLNRLEDMLCTVIRTVIEHVGDLVAMLNPSQLIDPNGNVRDPANYKFTPKRPFRRLRYAD 730

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
                         +  P      I  +     RA   ++ E+ 
Sbjct: 731 AIQFCNENGILNTETGKPFEFGEDITDQPE---RAMVAKLGEFV 771



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 7/136 (5%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGG 495
           I D P      +  +  F  + F          +  D         D++  G  E+  G 
Sbjct: 755 ITDQPERAMVAKLGEFVFMTH-FPASMKSFYMQRDPD-DPTLTESVDVLAPGIGEVLGGS 812

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           +R +  + +L A+   G+        +       + G  PHGG   G++R+++ +L   +
Sbjct: 813 MRMYKFDELLDAYKREGLDAST----YYWYTDQRRYGGAPHGGFGLGVERLLVWMLNLDS 868

Query: 556 VREVSLFPMSQNFCDL 571
           V++  L+P     C  
Sbjct: 869 VKDACLYPRYMGRCKP 884


>gi|227514340|ref|ZP_03944389.1| possible lysine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087312|gb|EEI22624.1| possible lysine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 248

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 11/206 (5%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           G+L ++     V ++G +   R  G   F D+ D  G  Q     D    E  K  +   
Sbjct: 52  GELLLAQHN-VVTIAGRMIGKRGSGKASFADLLDRGGKIQFYVRQDMVGEEAYKLFKESD 110

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           +    G     + + I   +  G++ + A+KI  LS A   PLP          + ++ R
Sbjct: 111 L----GDFWGITGDVIKTRM--GELTVRAEKITFLSKALR-PLPDKYHGLQDPELVYRQR 163

Query: 130 FLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN 187
           +LDL  +         RT+II ++R  M    F+E  TPIL   +S   AR F+      
Sbjct: 164 YLDLITNRESFERFQTRTKIIKAVRRYMDDNGFLEVETPILENIASGAEARPFVTHHNAL 223

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRY 213
               Y +  A +   + L+  G +R 
Sbjct: 224 NIDMY-MRIATELRLKRLIVGGMERV 248


>gi|325118293|emb|CBZ53844.1| Asparaginyl-tRNA synthetase, related [Neospora caninum Liverpool]
          Length = 542

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 59/398 (14%), Positives = 113/398 (28%), Gaps = 78/398 (19%)

Query: 19  SFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSE---WVLCI 73
             V + GW   VR  GG  + F+ + D    T +    ++        +           
Sbjct: 59  KPVTVCGWSRSVRKQGGGSLCFVVLSDGSTSTNLQVVVEAGIGGDFPQLLKCGAGCSFRF 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G V+   A+     +          ++EIL + +    P+  +    E +R +   L  
Sbjct: 119 TGDVVKSPAKGQAVELAVRDPS-KGHRLEILGMTDAAKYPLAKKEHTREYLR-EIAHLRP 176

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG---- 189
           R   +      R+ +  +         F+   TPI+TAS  EGA +    S +       
Sbjct: 177 RSYLIGAVTRVRSNLAMATHRFFQDRGFLYIHTPIVTASDCEGAGEMFQVSTLLPPPPAE 236

Query: 190 -------------------------------------SFYALP---QAPQQYKQLLMASG 209
                                                 F+  P       Q         
Sbjct: 237 TKENEKKADGAANGQAAAPAEPLVPLTKDKRGVDYSRDFFGRPAFLTVSGQLAVEPYCCA 296

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
               +   P FR E+  + R   EF+ ++ E++F   +D +   E  ++   +   +   
Sbjct: 297 LSDVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFATLEDNMVVAEAYVKFCVQWVLDNCR 356

Query: 270 VS---------------------NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
                                    F R+ Y +AI     ++P  +         +    
Sbjct: 357 ADIEWFQKNQEEGLVARLENILAEPFARVSYTEAIEILKAEEPKAQFK------EKVEWG 410

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
            +     +       Y+   I        +AF  ++NE
Sbjct: 411 MDMGSEHERYLTENIYKKPCIVYNYPKDIKAFYMKLNE 448



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 5/95 (5%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              D  +++A    LV    E+  G  R    + +        +  +             
Sbjct: 446 LNEDGKTVRAMDV-LVPKIGELVGGSQREDDRDRLAAMIQAKNLDPKPYW----WYMELR 500

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + G  PH G   G +R+VML+ G +N+R+   +P 
Sbjct: 501 EYGTIPHAGFGLGFERLVMLVTGIENIRDTIPYPR 535


>gi|261203891|ref|XP_002629159.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239586944|gb|EEQ69587.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 558

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 57/295 (19%), Positives = 103/295 (34%), Gaps = 27/295 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSV 65
           DL        V +   V   R     + FL +R      Q V            +    +
Sbjct: 93  DLSEELFEKEVTVVARVDNARVQSAKLAFLMLRQQGKKVQAVVSASDEISRPMVKWIGGI 152

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--- 122
               ++ +  +V        +A +    +EL  +K  +++ A ++      + E P    
Sbjct: 153 NVNSIVQVTAVVKKPEIPVSSATLS--HLELHIRKAYMVAQAAQMLPMQVKDAERPPPES 210

Query: 123 --------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                           R   R LDL+ +T        + +       M+       STP 
Sbjct: 211 VTEEVDSETPYVTLKTRLDNRVLDLQTETNQAITWISSGVAQLFTEYMLKSGSRWISTPK 270

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LT ++ EG       +   + ++ A  Q+PQ YKQ+ +A      F++ P FR E+  + 
Sbjct: 271 LTGNASEGGAGVFEVTYFKKKAYLA--QSPQLYKQMCIAGDLGSVFEVGPVFRAEESNTH 328

Query: 229 RLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           R   EF  LD E +F     ++L   E++L  +  +           ++  Y  A
Sbjct: 329 RHLTEFIGLDFEKTFQSHYHEVLEFAEDLLVFILSQLKERFKKEIEVIQRSYPKA 383



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/188 (24%), Positives = 73/188 (38%), Gaps = 25/188 (13%)

Query: 384 TEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-F 440
            +   +RL   +G +    AG D  +   F  D    + ++LG I    ++  + ++D F
Sbjct: 390 KDGKALRLKYMEGVALLKEAGVDVTEQEKFENDLTTAMEKQLGRIIREKYDTDFYVLDKF 449

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P                 +T P     +          +  YD    G EI SG  R + 
Sbjct: 450 PM-----------AVRPFYTKPCPDDPTF---------SNSYDFFMRGEEIMSGAQRINE 489

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           ++ +  A +  G+        F     AF+ G PPH G   G++RIVM  LG  N+R  +
Sbjct: 490 AKELEAAMTAKGLDPNG--EGFEDYIGAFRQGCPPHAGGGLGLNRIVMFFLGLPNIRLAT 547

Query: 561 LFPMSQNF 568
           LFP     
Sbjct: 548 LFPRDPQR 555


>gi|326474010|gb|EGD98019.1| asparaginyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326478207|gb|EGE02217.1| asparaginyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 580

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 60/327 (18%), Positives = 121/327 (37%), Gaps = 28/327 (8%)

Query: 33  HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITG 92
              +IFL + D YG+ Q V   D      A ++  E  + I G + +   +    +    
Sbjct: 170 QKDMIFLTLTDGYGLLQCVFTGDLTKTYDAMTLTLETSMAIHGEMRAVPVKQHAPDNR-- 227

Query: 93  QIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIIN 150
             EL A   +++  A  ++  +      +         R L LR +T    +  R  ++ 
Sbjct: 228 --ELHADFFQVIGRAAGDKEAITTRVAADADPQTLLDNRHLVLRGETSSSVLKVRAAVVR 285

Query: 151 SMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF 210
           + R     +  +E + P +  +  EG           + ++  L Q+ Q Y +  +AS  
Sbjct: 286 AFRKTFEQKQMLEVTPPAMVQTQVEGGSTLFEFDYYGEKAY--LTQSSQLYLETCLAS-L 342

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF--------- 261
              F I P FR E   + R   E+  ++ E+ F+  +D+L+ +E ++  V          
Sbjct: 343 GDVFCICPSFRAEKSLTRRHLSEYTHIESELDFITFNDLLDHIEEIICSVIDISLADPQI 402

Query: 262 ----EEFS-NGNTVSNNFLRICYDDAIRR---YGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
               ++ + +    +  F R+ Y +AI     +G +  + +      ++ E        +
Sbjct: 403 AAFVKQLNPDFTPPARPFRRMRYSEAIEWLNEHGINNEEDKPHSFGDDIAEAAERKMTDI 462

Query: 314 FSKI--LSVNPGYEVWAIPAKGGGGNR 338
            +K   L+  P         K     R
Sbjct: 463 INKPILLTHFPAEIKAFYMKKDAEDPR 489



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 13/122 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M +         D    ++   D++  G  EI  G +R    + ++ A+ 
Sbjct: 471 HFPAEIKAFYMKKDA------EDPRVTESV--DVLMPGVGEIVGGSMRMDDWDELMGAYK 522

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G+        +       + G  PHGG   G++R +  + G   VRE SL+P     C
Sbjct: 523 KEGMDPTP----YYWYTDQRKYGTSPHGGYGLGLERFLAWMCGRYTVRECSLYPRFTGRC 578

Query: 570 DL 571
             
Sbjct: 579 TP 580


>gi|239608825|gb|EEQ85812.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
 gi|327356134|gb|EGE84991.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 558

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 57/295 (19%), Positives = 103/295 (34%), Gaps = 27/295 (9%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSV 65
           DL        V +   V   R     + FL +R      Q V            +    +
Sbjct: 93  DLSEELFEKEVTVVARVDNARVQSAKLAFLMLRQQGKKVQAVVSASDEISRPMVKWIGGI 152

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--- 122
               ++ +  +V        +A +    +EL  +K  +++ A ++      + E P    
Sbjct: 153 NVNSIVQVTAVVKKPEIPVSSATLS--HLELHIRKAYMVAQAAQMLPMQVKDAERPPPES 210

Query: 123 --------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                           R   R LDL+ +T        + +       M+       STP 
Sbjct: 211 VTEEVDSETPYVTLKTRLDNRVLDLQTETNQAITWISSGVAQLFTEYMLKSGSRWISTPK 270

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           LT ++ EG       +   + ++ A  Q+PQ YKQ+ +A      F++ P FR E+  + 
Sbjct: 271 LTGNASEGGAGVFEVTYFKKKAYLA--QSPQLYKQMCIAGDLGSVFEVGPVFRAEESNTH 328

Query: 229 RLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           R   EF  LD E +F     ++L   E++L  +  +           ++  Y  A
Sbjct: 329 RHLTEFIGLDFEKTFQSHYHEVLEFAEDLLVFILSQLKERFKKEIEVIQRSYPKA 383



 Score =  102 bits (253), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 46/188 (24%), Positives = 73/188 (38%), Gaps = 25/188 (13%)

Query: 384 TEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-F 440
            +   +RL   +G +    AG D  +   F  D    + ++LG I    ++  + ++D F
Sbjct: 390 KDGKALRLKYMEGVALLKEAGVDVTEQEKFENDLTTAMEKQLGRIIREKYDTDFYVLDKF 449

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P                 +T P     +          +  YD    G EI SG  R + 
Sbjct: 450 PM-----------AVRPFYTKPCPDDPTF---------SNSYDFFMRGEEIMSGAQRINE 489

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           ++ +  A +  G+        F     AF+ G PPH G   G++RIVM  LG  N+R  +
Sbjct: 490 AKELEAAMTAKGLDPNG--EGFEDYIGAFRQGCPPHAGGGLGLNRIVMFFLGLPNIRLAT 547

Query: 561 LFPMSQNF 568
           LFP     
Sbjct: 548 LFPRDPQR 555


>gi|194246559|ref|YP_002004198.1| asparaginyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|254782878|sp|B3R0I1|SYN_PHYMT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|193806916|emb|CAP18345.1| Asparaginyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 465

 Score =  141 bits (356), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 110/279 (39%), Gaps = 30/279 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLCI 73
              + L GW+   R    + F+D  D   I  +      + +    +I K ++    + I
Sbjct: 17  NKKIFLKGWIRNCRFQKKLFFIDFNDGTFINDLQIVCKKDKNFFLEKIKKKLQIGASIEI 76

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           +G ++       N  I     EL A+KI IL  +      +   + + ++   K   L L
Sbjct: 77  EGFLVK------NFKINDI-FELEAEKINILGSSS--FEYLIQPKNHSKAFLRKIPHLRL 127

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG---- 189
           R          R+ +  ++      E+F+  +TPI+T +  EGA D    + +N      
Sbjct: 128 RTKIFGSVFRIRSAVFLAIHEFFKNEDFLLTNTPIITVNDGEGAGDLFQITTLNLEKLVL 187

Query: 190 ----------SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+          Q +   +A+ F++ + + P FR ++  + +   EF+ 
Sbjct: 188 TKDKKIDYLKDFFGRKTFLSVTGQLELEALATSFNKVYSLGPIFRADNSNTIKHVAEFWM 247

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           L++EM+F   +  +  +E +L+ V +     N     FL
Sbjct: 248 LEVEMAFSNLEKNMEIIERMLKKVVKSCLLTNQNDLKFL 286



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 64/198 (32%), Gaps = 25/198 (12%)

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K L+   +  +  +L+   G   F     P      A D       +        F+   
Sbjct: 284 KFLDENESPGLIKKLNEFIGLKSF-----PKIKYKEAMDILIKSGVDF------EFKPFH 332

Query: 437 IMDFPFYEWNEEEKKIDFAHNP---FTMPQGGMES---LKGNDLLSIKAFQYDLVCNGFE 490
             DF    + E EK +   H     F +          +K N      A    LV    E
Sbjct: 333 GSDF----YTEHEKYLTEVHFKSPVFIIDWPKEIKAFYMKINPDKKTVACVDLLVPFVGE 388

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           +  G  R    E++      + IS               + G   H G   G +R+++ L
Sbjct: 389 LVGGSQREENLEILKNRMKELNIS----SENLEWYLDLRRFGSCVHSGFGLGFERLLIYL 444

Query: 551 LGAKNVREVSLFPMSQNF 568
            G +N+R+V  FP+S   
Sbjct: 445 TGVENIRDVIAFPLSSKS 462


>gi|327308538|ref|XP_003238960.1| asparaginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326459216|gb|EGD84669.1| asparaginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 550

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 55/271 (20%), Positives = 104/271 (38%), Gaps = 26/271 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             +R+ G V  +R      F  I D   +  + A       E A ++     + + G+  
Sbjct: 66  KELRVQGHVRFLRKQKRFAFAHISDGSSLQPIQA---VLTPEQATNLTQGAAVEVTGIWQ 122

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                   ++      EL A K++I+  A+    P+  +   P+ +R     L LR    
Sbjct: 123 PSPPGKQQSH------ELQATKVDIVGEADPATYPIQKKFHTPDFLRQL-PHLRLRTPFN 175

Query: 139 HKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFL-------VPSRVNQ 188
                 R+  I  +     +    NF++   P++T+S  EGA +         V      
Sbjct: 176 ALLSRLRSEFIYQVTEEFRSHRHLNFVQVQPPLITSSDCEGAGEVFSIKPRDFVTEEGKA 235

Query: 189 GSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             F+  P+    + Q + +   A+     + ++P FR E   + R   EFY L++EMS++
Sbjct: 236 IEFFKSPKYLTVSSQLHLE-AYAAELGNVWTLSPTFRAEKSDTPRHLSEFYMLEVEMSYM 294

Query: 245 EQ-DDILNTMENVLRGVFEEFSNGNTVSNNF 274
           +  + +   +E +LR   +   N       F
Sbjct: 295 DSLEPLTAFVETLLRNTTQRVYNSPVARELF 325


>gi|67536760|ref|XP_662154.1| hypothetical protein AN4550.2 [Aspergillus nidulans FGSC A4]
 gi|40741703|gb|EAA60893.1| hypothetical protein AN4550.2 [Aspergillus nidulans FGSC A4]
 gi|259482620|tpe|CBF77275.1| TPA: aspartyl-tRNA synthetase Dps1, putative (AFU_orthologue;
           AFUA_2G02590) [Aspergillus nidulans FGSC A4]
          Length = 555

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 57/298 (19%), Positives = 104/298 (34%), Gaps = 30/298 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFEIAK---SV 65
            +        V +   V   R     + FL + +    +  V+A  +    ++ K    +
Sbjct: 87  QINDEHYEKEVTVVARVDNARAQSAKLAFLMLRQQGLKVQAVIAAAEPISRQMVKYTSGL 146

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--- 122
               ++ + G+V        +A +     E+  +K+ +++ A +       + E P    
Sbjct: 147 NVNSIVQVTGIVKKPGVPIASATLSN--HEIHIRKVYMIAEAAQQLPMQVKDAERPLPET 204

Query: 123 -----------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
                              R   R LDL+  T        + +       MI       S
Sbjct: 205 TEEGFQVDSDGAPIVTLKTRLDNRVLDLQTATSQAITWISSGVAELFAEYMIKSGSRWIS 264

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP L  ++ EG           + ++ A  Q+PQ YKQ+ +A      F+IAP FR E+ 
Sbjct: 265 TPKLVGAATEGGSGVFEVKYFKRNAYLA--QSPQLYKQMCIAGDMQSVFEIAPVFRAEES 322

Query: 226 RSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
            + R   EF  LD E +F     ++L   E +L  +  +           ++  Y  A
Sbjct: 323 NTHRHLTEFTGLDFEKTFSSHYHEVLEFAEQLLVFILSQLKERYADQIAIIQKSYPKA 380



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 25/188 (13%)

Query: 384 TEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-F 440
            +   +RL+  DG +    AG D  +   F  D    + ++LG I    ++  + ++D F
Sbjct: 387 KDGKALRLNYMDGVALLKEAGVDVSEQERFENDFTTAMEKQLGQIIREKYDTDFYVLDKF 446

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P             A  PF             D     +  YD    G EI SG  R H 
Sbjct: 447 PM------------AVRPFYTKAC------PQDPR--FSNSYDFFMRGEEIMSGAQRIHD 486

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            + +  +    G++    +  F     AF+ G PPH G   G++RIVM  LG  N+R  +
Sbjct: 487 VKELEASMIAKGVNPN--QEGFEDYLAAFRQGCPPHAGGGLGLNRIVMFFLGLPNIRLAT 544

Query: 561 LFPMSQNF 568
           LFP     
Sbjct: 545 LFPRDPQR 552


>gi|195124475|ref|XP_002006718.1| GI21220 [Drosophila mojavensis]
 gi|193911786|gb|EDW10653.1| GI21220 [Drosophila mojavensis]
          Length = 460

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 59/286 (20%), Positives = 113/286 (39%), Gaps = 36/286 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G +  G  +++ GW+  VR     IFLDI D     +             + + +  V+ 
Sbjct: 19  GANKAGDTLQVQGWIKNVRRLKNNIFLDINDGSTSDKFQLVVPRTLE--TQKLTAGSVVS 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFL 131
             G V              G  EL A+ ++ ++    +   P   ++++      ++  L
Sbjct: 77  AVGRVQVAP---------NGHYELHAENVQSIAEGHLQDGYPFSPKQQHAPEYVREHLHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP-------- 183
             R D +   +  R +   ++   M   NF++ +TPILT +  EGA +            
Sbjct: 128 RSRIDYIAAQMRVRHKAQKAIHDYMDELNFVQINTPILTTNDCEGAGEVFRVQPESAQLL 187

Query: 184 ------------SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                       S  +Q +F  L  + Q + +  M+ G    +  AP FR E+ +S    
Sbjct: 188 KQMSRPNVPVEESYFDQKAF--LSVSGQLHLE-AMSYGLGNTYTFAPAFRAENSKSPLHL 244

Query: 232 GEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            EFY  + E+ ++EQ D++   +E  L+ + +   N +    +F +
Sbjct: 245 AEFYMFEAELVYMEQLDELAAFIECTLKEITKRLLNSSASDLHFCQ 290



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 56/149 (37%), Gaps = 30/149 (20%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           QEL ++  +C    +++++P                PF M       +  +D   + A  
Sbjct: 339 QELFLV-AHCGAPVFVLNWP------------TQQKPFYMK------VSRSDPQRVHAL- 378

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+     E+  G +R   +E++ +                       + G  P GG  
Sbjct: 379 -DLLMPSVGELCGGSLRESDAELLSKH--------PKFPKDLSWYVELRKYGGLPTGGFG 429

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G +R + LL G KN+R+V  +P   + C
Sbjct: 430 MGFERYLQLLTGVKNIRDVIPYPRYPHSC 458


>gi|311112624|ref|YP_003983846.1| lysine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310944118|gb|ADP40412.1| lysine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 1110

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 94/252 (37%), Gaps = 12/252 (4%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
               LSG V  +R HGG+IFL + +     Q++A          + ++S       G ++
Sbjct: 669 REFTLSGRVRFIRNHGGVIFLTLSEEGKQVQIIAERSLVSEREFRLLKSA---VDTGDIL 725

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDT 137
             +     +   TG   +     ++   A +   P+          R + R  DL     
Sbjct: 726 LVTGTAGTSR--TGTASVIVHSWQM---AAKCLHPIPYGALNDPEARIRKRSTDLLVHPQ 780

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQ 196
             +N+  R+ +I ++R  +    F E  TPIL T      AR F        G+   L  
Sbjct: 781 QLENLRMRSSLITAIRRTLDDAGFTEVETPILNTIHGGASARPFKTFINAY-GADLTLRI 839

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ Y + L+  G    +++   FR+E   +   P EF  L+    + +   +    E +
Sbjct: 840 APELYLKRLVVGGLGAVYELGRDFRNEGADATHNP-EFTVLEAYKPYADYTVMRKLTETL 898

Query: 257 LRGVFEEFSNGN 268
           ++          
Sbjct: 899 IKNAARAVYGSE 910



 Score = 74.7 bits (182), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 54/161 (33%), Gaps = 30/161 (18%)

Query: 409  FCSFAADARNHIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
                       I +EL   ++        +  DFP      E   +  AH          
Sbjct: 968  VRDDMGA--GAILEELYGELVEAKTVFPTFYTDFPV-----ETSPLAGAHR--------- 1011

Query: 467  ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF---- 522
                 ++   +   ++DLV NG E+ +       +    +  +   +     +       
Sbjct: 1012 -----SEPHLV--ERWDLVINGMEMGTAYSEMTDALEQRRRLTEQSLKAAAGDPEAMQID 1064

Query: 523  GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 A + G+ P GG+  GIDR+ ML+   + +R V  FP
Sbjct: 1065 EDFLYALETGLVPTGGLGIGIDRLAMLMAQTQ-IRGVLSFP 1104


>gi|85114715|ref|XP_964741.1| aspartyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|28926534|gb|EAA35505.1| aspartyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|38636451|emb|CAE81986.1| related to aspartate--tRNA ligase [Neurospora crassa]
          Length = 594

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 73/393 (18%), Positives = 123/393 (31%), Gaps = 57/393 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA--------NPDSACFEIA 62
           +G   VG  V +  WV   R  G  + F+++R+    T                   + A
Sbjct: 109 IGEEHVGKAVIVRAWVQNARIQGAKMAFVELREEGAWTIQGVFVASNEGTPVSKPMVKFA 168

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--------- 113
             +  E  + ++G V        +  +     EL  +KI +L+ A ++            
Sbjct: 169 AGINPESFVVVEGTVQKPLEPVKSCKVSN--YELHIRKIFVLAAAPQMLGMTLAAANRPI 226

Query: 114 --VFGEREYPES-----------------------IRFKYRFLDLRRDTLHKNIVKRTRI 148
                E   PE                               +  R          R  +
Sbjct: 227 TNFSDEEPAPEKAAEDGVDKLSIAAESSIPAATMLTHLDNIIMHKRAPVQQAIADIRMEV 286

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            +  R  + +  F E   P L  ++ EG  +       ++ +F A  Q+PQ YKQ  +A 
Sbjct: 287 KDLFRSYLKSHGFKEFEPPCLIGAASEGGANVFRMPYFDKEAFLA--QSPQFYKQFEIAG 344

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNG 267
           G  R F I P FR E+  + R   EF  LD+EM    +  ++L  +E VL  +F      
Sbjct: 345 GRKRVFSIGPVFRAENSNTPRHMTEFTGLDLEMEIKKDYREVLLMLEGVLLHIFRGIKER 404

Query: 268 NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
                  +R  Y            ++R  +      +         F  + + +      
Sbjct: 405 CAAEIELVRSVYPAEEFLLPEPGKEVR--LTFAEGQKLLREEGPEEFRNV-TDDEDMSTP 461

Query: 328 AIPAKGGGGNRAF------CDRMNEWARSQGQP 354
              A G    + F       D+  E AR     
Sbjct: 462 QEKALGAIVRKKFNTDFYVLDKFPEGARPFYAK 494



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 50/148 (33%), Gaps = 21/148 (14%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG I    F      DF   +   E  +      PF             D        
Sbjct: 464 KALGAIVRKKFN----TDFYVLDKFPEGAR------PFYAKLD--------DANPKVTNA 505

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC-GMPPHGGIA 540
           +D    G EI SGG R +  E +       G+  +    +       F+  G+P HGG  
Sbjct: 506 FDFFLRGQEILSGGQRINDPEELEARIIQKGVDPKSAGIK--DYVDVFRQAGVPAHGGGG 563

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G+DR+V   L   +V   + +P +   
Sbjct: 564 IGLDRVVAWFLNLPSVHLAAYYPRTPKR 591


>gi|116203221|ref|XP_001227422.1| hypothetical protein CHGG_09495 [Chaetomium globosum CBS 148.51]
 gi|88178013|gb|EAQ85481.1| hypothetical protein CHGG_09495 [Chaetomium globosum CBS 148.51]
          Length = 916

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 66/363 (18%), Positives = 132/363 (36%), Gaps = 28/363 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH----YGITQVVANPDSACF-EIAKSVR 66
             S+ G  V     +H VR     + F+  RD      G+        S  F   A+ + 
Sbjct: 110 DPSNAGKAVSFIARIHHVRCMSSKLAFVIFRDQIELIQGVLAYREGEISENFVRWAEHLV 169

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES--- 123
           SE  + + G++     E    +I   ++E+    +  +   +E         +  E    
Sbjct: 170 SEGFVHVQGILQRPPEEIKGCSIR--ELEVRIDTMHSVVPVQEHLPMDVFSMDRVEEDEE 227

Query: 124 -----------IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                      +R   R   LR  T          + ++ R  + A+NFIE  TP L   
Sbjct: 228 TGQLEGMASTRVRVSNRIAYLRTPTAQSIFRVNAVVCSTFRSILEADNFIEIHTPKLMPG 287

Query: 173 SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           + E   +        + +F A  Q+PQ  KQ+ +++ F R F+I P FR ED  + R   
Sbjct: 288 ATESGAEVFRVGYFGRTAFLA--QSPQLCKQMSISADFGRVFEIGPVFRAEDSNTHRHLT 345

Query: 233 EFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           E+  +D+EM+   +  + +  ++ +++ +FE          + ++  +      +  + P
Sbjct: 346 EYTGMDLEMAINSDYREAMRVIDKLMKSIFEAVYRRCRKEIDVVKTRFPHDDLVWLEETP 405

Query: 292 --DLRNPIIMHNVTEHFVHSEFRVFS-KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
               +  + + N +        +    + LS      +  +  +    +    D+    A
Sbjct: 406 ILTFKEAVDLLNSSGWTDDHGRKASEFEDLSTRAEIRIGELVKEKFKTDYYIIDKFPASA 465

Query: 349 RSQ 351
           R  
Sbjct: 466 RPF 468



 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 69/191 (36%), Gaps = 27/191 (14%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
           L        +  +D+ +        G    +F   +  A   I +   ++        +I
Sbjct: 401 LEETPILTFKEAVDLLNSSGWTDDHGRKASEFEDLSTRAEIRIGE---LVKEKFKTDYYI 457

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           +D           K   +  PF         L   D     +  +D+   G EI +GG R
Sbjct: 458 ID-----------KFPASARPFYT------HLDPQDDRVTNS--FDIFLRGQEITTGGQR 498

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            H  +++ +     GI    VE       + F+ G+ PH G   G++R++ LLL   ++R
Sbjct: 499 IHKPDLLKERMKKAGIEPSGVEE----YMQGFEFGVLPHAGCGIGLERLLFLLLNLGDIR 554

Query: 558 EVSLFPMSQNF 568
             SLFP     
Sbjct: 555 HASLFPRDPKS 565


>gi|328480062|gb|EGF49060.1| aspartyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 157

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 2/145 (1%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP--DSACFEI 61
            RT   GD+    +   V L GWV + R  G +IF+D+RD  GI Q+V +   D     +
Sbjct: 3   KRTCYAGDVNTDYLDQEVTLKGWVQKRRSLGSLIFIDLRDREGIVQLVFSDAIDRDALTV 62

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A SVRSE+V+ + G+V  R  + +N  + TG IE+    I IL+ A+  P  +       
Sbjct: 63  ANSVRSEYVVEVQGVVKKRKPQAVNPEMKTGDIEVEVHDITILNKAKTPPFYIEDNVAVT 122

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRT 146
           E  + +YR+LDLRR  + +    R+
Sbjct: 123 EETKLRYRYLDLRRPEMQRTFYPRS 147


>gi|325067937|ref|ZP_08126610.1| lysyl-tRNA synthetase [Actinomyces oris K20]
          Length = 557

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 102/280 (36%), Gaps = 32/280 (11%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
            +    V ++G V  +R  G + F+ ++D  G T        A      +  + +   +D
Sbjct: 82  QETDDVVGVAGRVVFLRNTGRLCFVTLQDGAGTTLQAMLSAKALPAEGHTALAAFKADVD 141

Query: 75  -GLVMSRSAETINANIITGQIELSAQ--------------------KIEILSVAEELPLP 113
            G  +      I++    G++ + A+                       I S A      
Sbjct: 142 LGDHLFVHGRVISSR--RGELSVMAEPVLREGVEAASAGDDDVEVPAWRIASKALRPLPK 199

Query: 114 VFGER-----EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTP 167
            +           E  R + R LDL      +++V+ R  ++ S+R      +++E  TP
Sbjct: 200 TWTNEAGEAVTLSEEQRVRRRELDLLTRPAARDMVRTRAAVVRSIRENFFRRDYLELETP 259

Query: 168 ILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +L        AR F+          Y L  A + Y +  +  G DR F+I   FR+E   
Sbjct: 260 MLQVIHGGAAARPFITHMNAFDMDLY-LRIATEIYLKRAVVGGVDRVFEINRNFRNEGAD 318

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           S   P EF  L+   ++ + D +     N+++    +  +
Sbjct: 319 SSHSP-EFTALEAYEAYSDYDGMAELTRNLVQQAARDAFD 357



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 57/162 (35%), Gaps = 28/162 (17%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           + A      I +EL  +    +   ++ DFP     E+   +   H              
Sbjct: 420 AVAGKVVEDIFEEL--VGNKLWAPTFVYDFP-----EDTSPLTRYHR------------- 459

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLY 526
                     ++DL   GFE A+         V  + F    ++    +           
Sbjct: 460 ---SKPGLTEKWDLYVRGFETATAYSELADPVVQRERFEAQALAAAKGDPEAMILDEDFL 516

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            A + G PP GG+  GIDR++M+L G   +RE   FP+ +  
Sbjct: 517 VAMEQGFPPSGGMGMGIDRLLMVLTGQG-IRETITFPLVKRG 557


>gi|262165551|ref|ZP_06033288.1| asparaginyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262025267|gb|EEY43935.1| asparaginyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 414

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 106/339 (31%), Gaps = 45/339 (13%)

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
             +  +E +    G  +  +   + +       EL+A  ++++   E+       +  + 
Sbjct: 6   LNNYDNEVLKLTTGCSVEVTGTIVESPASGQAFELAATAVKVVGWVEDADTYPMAKTRHS 65

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                +   L  R + +      R  +  ++      + +   S P++TAS  EGA +  
Sbjct: 66  IEYLREVAHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMF 125

Query: 182 VPSRVNQGSFYALPQAPQQYKQ-----------------LLMASGFDRYFQIAPCFRDED 224
             S ++  +          Y Q                    A    + +   P FR E+
Sbjct: 126 RVSTLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNGEAYACALSKVYTFGPTFRAEN 185

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------------ 266
             + R   EF+ ++ E++F + + +    E++L+ VF+                      
Sbjct: 186 SNTSRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDRINNEVI 245

Query: 267 ---GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVN 321
                 V ++F ++ Y DAI            P+   +   +EH        F   + V 
Sbjct: 246 ARLEKFVDSDFAQVDYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHFKAPVIVK 305

Query: 322 PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
              +            R   D     A     PG+  I 
Sbjct: 306 NYPKDI-----KAFYMRMNEDGKTVAAMDVLAPGIGEII 339



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 39/113 (34%), Gaps = 14/113 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M           D  ++ A   D++  G  EI  G  R    +V+       GI   
Sbjct: 313 AFYMRMNE-------DGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMREFGIDP- 362

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                        + G  PH G   G +R+V  + G  NVR+V  FP +    
Sbjct: 363 ---EHMDWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 412


>gi|315052496|ref|XP_003175622.1| asparaginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311340937|gb|EFR00140.1| asparaginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 580

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/327 (18%), Positives = 121/327 (37%), Gaps = 28/327 (8%)

Query: 33  HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITG 92
              +IFL + D YG+ Q V   D      A ++  E  + I G + +   +    +    
Sbjct: 170 QKDMIFLTLSDGYGLLQCVFTGDLTKTYDAMTLTLETSIAIHGEMRAVPVKQHAPDNR-- 227

Query: 93  QIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIIN 150
             EL A   +++  A  ++  +      +         R L LR +T    +  R  ++ 
Sbjct: 228 --ELHADFFQVIGRAAGDKEAITTRVAADADPQTLLDNRHLVLRGETSSSVLKVRAAVVR 285

Query: 151 SMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF 210
           + R     +  +E + P +  +  EG           + ++  L Q+ Q Y +  +AS  
Sbjct: 286 AFRKTFEQKQMLEVTPPAMVQTQVEGGSTLFEFDYYGEKAY--LTQSSQLYLETCIAS-L 342

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF--------- 261
              F + P FR E   + R   E+  ++ E+ F+  +D+L+ +E ++  V          
Sbjct: 343 GDVFCVCPSFRAEKSLTRRHLSEYTHIESELDFITFNDLLDHIEEIICSVIDISMADPQI 402

Query: 262 ----EEFS-NGNTVSNNFLRICYDDAIRR---YGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
               ++ + +    +  F R+ Y +AI     +G +  + +      ++ E        +
Sbjct: 403 AAFVKQLNPDFQPPARPFRRMRYSEAIEWLNEHGINNEEDKPHSFGDDIAEAAERKMTDI 462

Query: 314 FSKI--LSVNPGYEVWAIPAKGGGGNR 338
            +K   L+  P         K     R
Sbjct: 463 INKPILLTHFPAEIKAFYMKKDAEDPR 489



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 13/122 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M +         D    ++   D++  G  EI  G +R    + ++ A+ 
Sbjct: 471 HFPAEIKAFYMKKDA------EDPRVTESV--DVLMPGVGEIVGGSMRMDDWDELMAAYK 522

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G+        +       + G  PHGG   G++R +  + G   VRE SL+P     C
Sbjct: 523 KEGMDPAP----YYWYTDQRKYGTSPHGGYGLGLERFLAWMCGRYTVRECSLYPRFTGRC 578

Query: 570 DL 571
             
Sbjct: 579 TP 580


>gi|302655131|ref|XP_003019360.1| hypothetical protein TRV_06641 [Trichophyton verrucosum HKI 0517]
 gi|291183076|gb|EFE38715.1| hypothetical protein TRV_06641 [Trichophyton verrucosum HKI 0517]
          Length = 539

 Score =  141 bits (355), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 61/327 (18%), Positives = 122/327 (37%), Gaps = 28/327 (8%)

Query: 33  HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITG 92
              +IFL + D YG+ Q V   D      A ++  E  + I G + +   +    +    
Sbjct: 170 QKDMIFLTLTDGYGLLQCVFTGDLTKTYDAMTLTLETSMAIHGEMRAVPVKQHAPDNR-- 227

Query: 93  QIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIIN 150
             EL A   +++  A  ++  +      +         R L LR +T    +  R  ++ 
Sbjct: 228 --ELHADFFQVIGRAAGDKEAITTRVAADADPQTLLDNRHLVLRGETSSSVLKVRAAVVR 285

Query: 151 SMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF 210
           + R     +  +E + P +  +  EG           + ++  L Q+ Q Y +  +AS  
Sbjct: 286 AFRKTFEQKQMLEVTPPAMVQTQVEGGSTLFEFDYYGEKAY--LTQSSQLYLETCLAS-L 342

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF--------- 261
              F I P FR E   + R   E+  ++ E+ F+  +D+L+ +E ++  V          
Sbjct: 343 GDVFCICPSFRAEKSLTRRHLSEYTHIESELDFITFNDLLDHIEEIICSVIDISLADPQI 402

Query: 262 ----EEFS-NGNTVSNNFLRICYDDAIRR---YGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
               ++ + N    +  F+R+ Y +AI     +G +  + +      ++ E        +
Sbjct: 403 AAFVKQLNPNFTPPARPFMRMRYSEAIEWLNEHGINNEEDKPHSFGDDIAEAAERKMTDI 462

Query: 314 FSKI--LSVNPGYEVWAIPAKGGGGNR 338
            +K   L+  P         K     R
Sbjct: 463 INKPILLTHFPAEIKAFYMKKDAQDPR 489


>gi|320533484|ref|ZP_08034159.1| lysyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320134309|gb|EFW26582.1| lysyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 566

 Score =  140 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 102/279 (36%), Gaps = 32/279 (11%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID- 74
           +    V ++G V  +R  G + F+ ++D  G T        A      +  + +   +D 
Sbjct: 92  ETDDVVGVAGRVVFLRNTGRLCFVTLQDGAGTTLQAMLSAKALPAEGHTALAAFKADVDL 151

Query: 75  GLVMSRSAETINANIITGQIELSAQ--------------------KIEILSVAEELPLPV 114
           G  +      I++    G++ + A+                       I S A       
Sbjct: 152 GDHLFVHGRVISSR--RGELSVMAEPVLREGAEAASAGDDDVEVPAWRIASKALRPLPKT 209

Query: 115 FGER-----EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPI 168
           +           E  R + R LDL      +++V+ R  ++ S+R      +++E  TP+
Sbjct: 210 WTNEAGEAVTLSEEQRVRRRELDLLTRPAARDMVRTRAAVVRSIRENFFRRDYLELETPM 269

Query: 169 LTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           L        AR F+          Y L  A + Y +  +  G DR F+I   FR+E   S
Sbjct: 270 LQVIHGGAAARPFITHMNAFDMDLY-LRIATEIYLKRAVVGGVDRVFEINRNFRNEGADS 328

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
              P EF  L+   ++ + D +     N+++    +  +
Sbjct: 329 SHSP-EFTALEAYEAYSDYDGMAELTRNLVQQAARDAFD 366



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 57/162 (35%), Gaps = 28/162 (17%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           + A      I +EL  +    +   ++ DFP     E+   +   H              
Sbjct: 429 AVAGKVVEDIFEEL--VGNKLWAPTFVYDFP-----EDTSPLTRYHR------------- 468

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLY 526
                     ++DL   GFE A+         V  + F    ++    +           
Sbjct: 469 ---SKPGLTEKWDLYVRGFETATAYSELADPVVQRERFEAQALAAAKGDPEAMILDEDFL 525

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            A + G PP GG+  GIDR++M+L G   +RE   FP+ +  
Sbjct: 526 VAMEQGFPPSGGMGMGIDRLLMVLTGQG-IRETITFPLVKRS 566


>gi|125808696|ref|XP_001360836.1| GA19868 [Drosophila pseudoobscura pseudoobscura]
 gi|54636008|gb|EAL25411.1| GA19868 [Drosophila pseudoobscura pseudoobscura]
          Length = 460

 Score =  140 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 62/344 (18%), Positives = 123/344 (35%), Gaps = 54/344 (15%)

Query: 1   MHRYRTHSCGDLGVSDV------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           M   R   C    +S +      G  + + GW+  +R      FLDI D    ++     
Sbjct: 1   MLLIRRFYCSSQRISHIAKSNKRGDSLGIRGWIKNIRRLKNNTFLDIDDGSSSSRFQVVV 60

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLP 113
                   +++    V+   G +              G  EL A ++E L+    +   P
Sbjct: 61  PRNPE--TQNLTPGSVISAVGEIQVAP---------NGNFELHADRVESLAEGHLQDGYP 109

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
              ++++      ++  L  R D +   +  R +   ++   M   +F++ +TP++T + 
Sbjct: 110 FTPKQKHAPEYVREHLHLRSRVDYVAAQMRIRHKAQKAIHDYMDELDFVQINTPLMTTND 169

Query: 174 PEGARDFLV--PSRVNQGSFYALPQAP---------------QQYKQLLMASGFDRYFQI 216
            EGA +     P         A P  P                Q     M  G    + +
Sbjct: 170 CEGAGEVFRVQPDSEELLKQMARPNVPAEQSYFDSKVFLSVSGQLHLEAMTYGLGNTYCL 229

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           AP FR E+ +S     EFY  + E++ +++ + +   +E +L+ +       ++   +F 
Sbjct: 230 APAFRAENSKSPLHLAEFYMFEAELAHLDELEKLAKFIEQMLKSITNRVLETSSEDLHFC 289

Query: 276 R------------------ICYDDAIRRYGTDKPDLRNPIIMHN 301
           +                  + YDDA+     +K  L+ PI +  
Sbjct: 290 QRNANASSDLPWLTVPWTIMSYDDALHVLQANKESLKTPISLDE 333



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 47/137 (34%), Gaps = 29/137 (21%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             +++D+P                PF M       +  N+   + A   DL+     E+ 
Sbjct: 350 PVFVVDWP------------TQQKPFYMK------ITRNNPDRVHAL--DLLMPAVGELC 389

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G +R   +  +         S               + G  P GG   G +R + L+ G
Sbjct: 390 GGSLRESDAATLS--------SHPQFPKDLSWYVDLRKYGGIPTGGFGMGFERYLQLVTG 441

Query: 553 AKNVREVSLFPMSQNFC 569
            KN+R+V  FP   + C
Sbjct: 442 VKNIRDVIPFPRYPHSC 458


>gi|312385932|gb|EFR30320.1| hypothetical protein AND_00184 [Anopheles darlingi]
          Length = 436

 Score =  140 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 62/315 (19%), Positives = 116/315 (36%), Gaps = 53/315 (16%)

Query: 24  SGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAE 83
            GWV  VR   G +F+D+ D                   + V S+          S  A 
Sbjct: 1   MGWVKSVRNLKGNLFVDVNDGSTAAN------------FQLVISKDKQLDTAYGSSVDAC 48

Query: 84  TINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNI 142
            +       ++EL    + EI +       P + ++ YP      +  L  R  ++    
Sbjct: 49  GVLVTSPKNRLELQVDSLKEIGTCPLTEGFPFYPKKSYPPEYVRNHLHLRSRVSSMCSTF 108

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-------------- 188
             R     +    +    FI+  TP+LT++  EGA +  +   +N               
Sbjct: 109 RVRHEAQRAFNEYLHQNGFIQIHTPVLTSNDCEGAGEAFLVKPLNDQLLKGMAKANVAME 168

Query: 189 GSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
            +++  P       Q     M+ G D+ +   P FR E+ +S+    EFY L++E +F+E
Sbjct: 169 HAYFDRPTFLTVSGQLHLEAMSHGLDKVYTFGPTFRAENCKSNIHLSEFYMLELEEAFME 228

Query: 246 -QDDILNTMENVLRGVFEEFSN----------------------GNTVSNNFLRICYDDA 282
             +++ + +E++L+ V     +                         +   F R+ YD+A
Sbjct: 229 SVEELADRIEDMLKRVTVLMLDRSETDVRLVRKQTSSDDDRKDAFGWLEKPFPRLTYDEA 288

Query: 283 IRRYGTDKPDLRNPI 297
           I     +K  L++P+
Sbjct: 289 IAVLRANKDKLKSPV 303



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 8/86 (9%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV +  E+  G +R    E + +   N         +         + G     G   G 
Sbjct: 355 LVPHVGELVGGSVREDSYERLQRKLPNT--------DALRWYLDLRKFGSVTTAGFGLGF 406

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R +  +L   N+++V  FP   + C
Sbjct: 407 ERYLSWVLNVHNIKDVIPFPRWAHNC 432


>gi|190344391|gb|EDK36059.2| hypothetical protein PGUG_00157 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 544

 Score =  140 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 13/253 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           ++ G +  VR  G GI FLD+       Q++A+       +    +    L     V++ 
Sbjct: 85  KIEGRISSVRRSGRGIYFLDLVQDDEKVQLMAHHKLMELSVDDFDQHHSFLRSGDYVVAV 144

Query: 81  SAETINANIITGQIELSAQK-IEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTL 138
                 +    G++ L     IE++S           E+    S+  K R LD +     
Sbjct: 145 G---FPSTTNVGELTLKLNCPIELVSPCL--NSTTIPEKLSDRSLINKNRVLDYIVSPES 199

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVN---QGSFYAL 194
            +++V R+ +I ++R   +   F+E  TP+L  + +   A+ F   SR     +    +L
Sbjct: 200 REHMVIRSLVIQAIRSFFLQRQFLEVQTPLLAGNGTGANAQPFKTASRALGSSEEESLSL 259

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ + + L+ SGFD+ F+I P FR+E   +   P EFY  +   SF+  ++++   +
Sbjct: 260 RVAPELWLKRLVISGFDKVFEIGPSFRNEGVDATHNP-EFYTCEFYQSFLSLEELMEITQ 318

Query: 255 NVLRGVFEEFSNG 267
           ++   +    S  
Sbjct: 319 DLFAHIHSSLSTH 331



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 5/90 (5%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG-----LYRAFQCG 532
            + +++L  +G E  +     +     +  F     +K    +           R  + G
Sbjct: 446 ISSRFELFIDGKEYVNSYEEENSPFAQVSKFKIQQAAKSDHHDPEALVPDWQYARVMEYG 505

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +PP GG   GIDR+VML  GA  + +V  F
Sbjct: 506 LPPTGGWGCGIDRLVMLFSGASRISQVLPF 535


>gi|291302345|ref|YP_003513623.1| Aspartate--tRNA ligase [Stackebrandtia nassauensis DSM 44728]
 gi|290571565|gb|ADD44530.1| Aspartate--tRNA ligase [Stackebrandtia nassauensis DSM 44728]
          Length = 447

 Score =  140 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 105/249 (42%), Gaps = 13/249 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
              VG+ +R++GW+HR R    + F  +RD  G+ QVV + +       + +  E V+ +
Sbjct: 25  SEHVGARIRIAGWLHRRRLLKSVAFAIVRDRSGLAQVVVS-EEVARARLEELNEETVVEV 83

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE-YPESIRFKYRFLD 132
            G V++  A         G +EL    I +L  AE  P  ++                + 
Sbjct: 84  TGTVVANPA-------APGGVELVEPVITVLGEAEAPPFDLYRPSLRATLPTLLDRAPVS 136

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR           +      R  + A +F E  TP + AS+ E   +        +  + 
Sbjct: 137 LRHPRRKAAFELASAATMGFRETVAAMDFTEIFTPKIVASATESGANVFAIDYFGRPGYL 196

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILN 251
           A  Q+PQ YKQ  M   F+R F++ P FR E   + R   E+  LD+E  F+E   D+  
Sbjct: 197 A--QSPQFYKQ-TMVGVFERVFEVGPVFRAEPHDTVRHLAEYTSLDVEFGFIESYRDVAE 253

Query: 252 TMENVLRGV 260
            +  V+ G+
Sbjct: 254 VLREVVAGM 262



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/160 (29%), Positives = 64/160 (40%), Gaps = 21/160 (13%)

Query: 418 NHIAQELGIINCNCFEFC------------WIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
            H A+ L +I+    E              W+      EW   E   DFA          
Sbjct: 291 LHFAEALELISRETGEDLSGVNDLSPAHERWV-----GEWARREHGSDFAVVVGYPMSKR 345

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
                 +      +  +DL+  G E+ +GG R H     L A +  G S       + G 
Sbjct: 346 PFYTAEDPGRPGYSDSFDLLFRGTEMVTGGRRLHRYADYLAAIAAQGGSP----EPYAGY 401

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             AF+ GMPPHGG A G++R V  L G  N+REV+LFP  
Sbjct: 402 LEAFKHGMPPHGGFAIGLERFVAQLTGVANIREVTLFPRD 441


>gi|297571583|ref|YP_003697357.1| lysyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931930|gb|ADH92738.1| lysyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 1062

 Score =  140 bits (354), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 116/264 (43%), Gaps = 15/264 (5%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RTHS  D    + G  + L+G VH VR +GG++F DI + +   QV+    +   E   +
Sbjct: 618 RTHSIADAVNMEAG-HMSLTGRVHHVRDYGGVVFADIVEEHAHIQVIFERSAG--EAWAT 674

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
            R+       G ++S + +   ++  +G   L  +     ++A +  +P+         +
Sbjct: 675 FRAC---VNRGDLVSVTGDLGASH--SGTFSLLGESW---AMAAKSLVPMPKIPLTNPHL 726

Query: 125 RFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLV 182
           R K R +D   +    N+ + R +++  +R  + A+ ++E  TPIL T      AR F  
Sbjct: 727 RAKLRHIDYAMNPQAYNLFRARAQVVAYVRQTLYAQGYLEAETPILQTIHGGANARPFRT 786

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             R    +   L  AP+ Y + L+  G  + F+I   FR+E   +   P EF  L+   +
Sbjct: 787 HIRAYDQAL-TLRIAPELYLKRLVVGGTPKVFEIGRNFRNEGVDATHNP-EFTSLEAYEA 844

Query: 243 FVEQDDILNTMENVLRGVFEEFSN 266
           + + D +    E + RG       
Sbjct: 845 YGDWDTMRVLTEELFRGAATAIHG 868



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 50/158 (31%), Gaps = 28/158 (17%)

Query: 410  CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
                      +  EL  I  +     +   FP               +P TM       +
Sbjct: 923  AETVGQLVTELYDEL--IESSTVFPTFYTGFP------------VETSPLTMADPDNPHI 968

Query: 470  KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGL 525
                     A ++DLV  G E+ +              F+   +                
Sbjct: 969  ---------AQRWDLVGLGMELGTAYTELAHPLEQRARFTQQSLLAAGGDPEAMEIDEPF 1019

Query: 526  YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              A + GMPP GG+  G+DR+VM L G   +R+V  FP
Sbjct: 1020 LTALEFGMPPTGGLGIGMDRMVMFLTGT-TIRDVLAFP 1056


>gi|326473036|gb|EGD97045.1| asparaginyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326477878|gb|EGE01888.1| asparaginyl-tRNA synthetase Slm5 [Trichophyton equinum CBS 127.97]
          Length = 552

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 55/271 (20%), Positives = 104/271 (38%), Gaps = 26/271 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             +R+ G V  +R      F  I D   +  + A       E A ++     + + G+  
Sbjct: 66  KELRVQGHVRFLRKQKRFAFAHISDGSSLQPIQA---VLTPEQATNLTQGSAVEVTGIWQ 122

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                   ++      EL A K+ I+  A+    P+  +   P+ +R     L LR    
Sbjct: 123 PSPPGKQQSH------ELQATKVAIVGEADPATYPIQKKFHTPDFLRQL-PHLRLRTPFN 175

Query: 139 HKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFL-------VPSRVNQ 188
                 ++  I  +     +    NF++   P++T+S  EGA +         V      
Sbjct: 176 ALLSRLKSEFIYQVTEEFRSHRHLNFVQVQPPLITSSDCEGAGEVFSIKPRDVVTEEGKA 235

Query: 189 GSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             F+  P+    + Q + +   A+     + ++P FR E   + R   EFY L++EMS+V
Sbjct: 236 IEFFKSPKYLTVSSQLHLE-AYAAELGNVWTLSPTFRAEKSDTPRHLSEFYMLEVEMSYV 294

Query: 245 EQ-DDILNTMENVLRGVFEEFSNGNTVSNNF 274
           +  + +   +E +LR + +   N       F
Sbjct: 295 DSLEPLTAFVETLLRNMTQRVYNSPVAQELF 325



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 58/180 (32%), Gaps = 43/180 (23%)

Query: 418 NHIAQELGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             +  E  +++        ++ D+P             A  PF M      S +  + ++
Sbjct: 388 LQLEHEKFLVDTIGKGLPVFVTDYP------------KAVKPFYMLPSSGSSNENGETVA 435

Query: 477 IKAFQYDLVCNG-FEIASGGIRNHMSEVMLQAFSNVGISK-------------EVVENRF 522
                +DL+     E+  G +R H    ++Q     G+ K                +  +
Sbjct: 436 C----FDLLLPEICEVVGGSLREHRLSPLIQNMREHGLLKLKDSTPEPASASAVDAKAPY 491

Query: 523 GGLY------------RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             L                + G  PHGG   G DR V  L G  N+R++  FP      D
Sbjct: 492 PHLLANEELGSIQWYADLRRWGTVPHGGFGLGFDRFVGYLAGVSNLRDLVPFPRYFGRAD 551


>gi|302495859|ref|XP_003009943.1| hypothetical protein ARB_03869 [Arthroderma benhamiae CBS 112371]
 gi|291173465|gb|EFE29298.1| hypothetical protein ARB_03869 [Arthroderma benhamiae CBS 112371]
          Length = 539

 Score =  140 bits (353), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 61/327 (18%), Positives = 122/327 (37%), Gaps = 28/327 (8%)

Query: 33  HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITG 92
              +IFL + D YG+ Q V   D      A ++  E  + I G + +   +    +    
Sbjct: 170 QKDMIFLTLTDGYGLLQCVFTGDLTKTYDAMTLTLETSMAIHGEMRAVPVKQHAPDNR-- 227

Query: 93  QIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIIN 150
             EL A   +++  A  ++  +      +         R L LR +T    +  R  ++ 
Sbjct: 228 --ELHADFFQVIGRAAGDKEAITTRVAADADPQTLLDNRHLVLRGETSSSVLKVRAAVVR 285

Query: 151 SMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF 210
           + R     +  +E + P +  +  EG           + ++  L Q+ Q Y +  +AS  
Sbjct: 286 AFRKMFEQKQMLEVTPPAMVQTQVEGGSTLFEFDYYGEKAY--LTQSSQLYLETCLAS-L 342

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF--------- 261
              F I P FR E   + R   E+  ++ E+ F+  +D+L+ +E ++  V          
Sbjct: 343 GDVFCICPSFRAEKSLTRRHLSEYTHIESELDFITFNDLLDHIEEIICSVIDISLADPQI 402

Query: 262 ----EEFS-NGNTVSNNFLRICYDDAIRR---YGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
               ++ + N    +  F+R+ Y +AI     +G +  + +      ++ E        +
Sbjct: 403 AAFVKQLNPNFTPPARPFMRMRYSEAIEWLNEHGINNEEDKPHSFGDDIAEAAERKMTDI 462

Query: 314 FSKI--LSVNPGYEVWAIPAKGGGGNR 338
            +K   L+  P         K     R
Sbjct: 463 INKPILLTHFPAEIKAFYMKKDAEDPR 489


>gi|154294100|ref|XP_001547493.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|150845057|gb|EDN20250.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 586

 Score =  140 bits (353), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 63/354 (17%), Positives = 120/354 (33%), Gaps = 33/354 (9%)

Query: 11  DLGV-SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           +LG     G+ V++SG +HR+R      F+ + D YG  Q +   D      A +     
Sbjct: 149 ELGEGEKKGTRVKVSGRIHRLREQKQATFITLVDGYGHLQCILQGDLTKTYDALTFAQGT 208

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV----AEELPLPVFGEREYPESIR 125
            L + G +    A            EL     +++      A+ +   +  +++  ES  
Sbjct: 209 SLTLYGEMRKVLAGQ----SAPDDRELHVDYYKVIGTSPSDADAITNKISHQQDQWESSM 264

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR DT    +  R+ +  +         F + S P    +  EG         
Sbjct: 265 LDNRHLVLRGDTASSVMKVRSAVEWAFAKAYKEMYFTKISPPAFVQTQVEGGSTLFELDY 324

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME----- 240
             + ++  L Q+ Q Y +  + S     + I   FR E   + R   E+  ++ E     
Sbjct: 325 YGEKTY--LTQSSQLYLETGIPS-LGNVYCIEKSFRAEKSLTRRHLSEYTHVEAELDFID 381

Query: 241 --MSFVEQDDILN------TMENVLRGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKP 291
                   +++++        +  + G  +E +      +  F R+ Y DAI       P
Sbjct: 382 FDDLLDHLEEMISTVISTIMADPEIAGYIKELNPEFQAPARPFKRMRYSDAIDWLNAQDP 441

Query: 292 DLRNP-----IIMHNVTEHF--VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
            + N      +   ++ E      ++      +L+  P         K     R
Sbjct: 442 PILNEEGNPHVFGDDIAEAAERRMTDIINLPILLTHFPVEIKAFYMKKDPQDPR 495



 Score = 63.9 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 13/122 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M +         D    ++   D++  G  EI  G +R    E ++ A+ 
Sbjct: 477 HFPVEIKAFYMKKD------PQDPRVTESV--DVLMPGVGEIVGGSMRMEGYEELMAAYE 528

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             GIS +     +       + G  PHGG   G++R +  +    +VR   L+P     C
Sbjct: 529 REGISPKE----YYWYTEQRKYGTSPHGGYGLGLERFIAWICKQHSVRTCCLYPRFMGRC 584

Query: 570 DL 571
             
Sbjct: 585 KP 586


>gi|209528216|ref|ZP_03276683.1| aspartyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209491338|gb|EDZ91726.1| aspartyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 91

 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 39/89 (43%), Positives = 51/89 (57%)

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
                  E   N+F  L  AF+ G PPHGGIA G+DR+VMLL G  ++R+V  FP +Q  
Sbjct: 1   MRSVYPTEEAYNKFRFLLEAFEYGTPPHGGIAYGLDRLVMLLAGEDSIRDVIAFPKTQQA 60

Query: 569 CDLLMGSPSTVSVEQLRELGLRIVENPKK 597
             LL  +PS V  +QL+EL +     PKK
Sbjct: 61  RCLLTNAPSGVDQKQLKELQVASTYKPKK 89


>gi|19922416|ref|NP_611176.1| CG6796 [Drosophila melanogaster]
 gi|7302847|gb|AAF57921.1| CG6796 [Drosophila melanogaster]
 gi|17945309|gb|AAL48711.1| RE15573p [Drosophila melanogaster]
 gi|220948064|gb|ACL86575.1| CG6796-PA [synthetic construct]
 gi|220957268|gb|ACL91177.1| CG6796-PA [synthetic construct]
          Length = 460

 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 59/315 (18%), Positives = 120/315 (38%), Gaps = 41/315 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L  +  G  + + GW+  VR      FLDI D    ++             + +    V+
Sbjct: 18  LKTNKPGDSLAIQGWIKNVRRLKNNTFLDINDGSTSSRFQVVVPRTPEN--QHLAPGSVI 75

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130
              G +              G  EL A ++E+L+    +   P   ++++P     ++  
Sbjct: 76  AAVGKIQVAP---------NGSFELHANQVEMLAEGRLQEGYPFSPKQKHPPEYVREHLH 126

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP------- 183
           L  R D +   +  R +   ++   M  ++F++ +TP+LT +  EGA +           
Sbjct: 127 LRSRVDFVAAQMRVRHKAQKAIHDYMDDQDFVQINTPLLTTNDCEGAGEVFRVQPDSQDL 186

Query: 184 -------------SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                        S  +   F  L  + Q + +  M  G  + + ++P FR E+ +S   
Sbjct: 187 LKQMNRPNIPMEQSYFDSKVF--LSVSGQLHLE-AMTYGLGKTYTLSPAFRAENSKSPLH 243

Query: 231 PGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             EFY  + E++ + E + +   +E +L+ V       +    +F +   +       +D
Sbjct: 244 LAEFYMFEAELAHLEEMEKLAQFIEQMLKSVTNRLLETSGEDLSFCQRNSNS-----NSD 298

Query: 290 KPDLRNPIIMHNVTE 304
            P L+ P  + +  E
Sbjct: 299 LPWLQVPWKIMSYDE 313



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 30/149 (20%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           QEL ++  +C    +++D+P                PF M       +  ++   + A  
Sbjct: 339 QELFLV-AHCGAPVFVVDWP------------AQQKPFYMK------VSRSNPNRVHAL- 378

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+     E+  G +R     ++         S   +           + G  P GG  
Sbjct: 379 -DLLMPAVGELCGGSLRESDPAIL--------KSHPHLPKDLEWYVDLRKYGGVPTGGFG 429

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G +R + L+ G KN+R+V  FP   + C
Sbjct: 430 MGFERYLQLVTGVKNIRDVIPFPRYPHSC 458


>gi|255326539|ref|ZP_05367620.1| lysine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255296415|gb|EET75751.1| lysine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 1085

 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 94/251 (37%), Gaps = 12/251 (4%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
            S   +SG +  +R HGG++F  + +     QV+             +         G +
Sbjct: 642 DSEFIVSGRIRALRNHGGVLFATLIEGDETLQVIMERGLVGE---LPLSLASRNLDTGDI 698

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRD 136
           ++       +   T    L A    + S +     P+  +       R + R  DL    
Sbjct: 699 ITVQGTYGVSRNGTQ--SLIATSWHMASKSL---HPIPFDSFTDPEARLRRRSTDLLVHP 753

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALP 195
              +N+  RT +I ++R R+ AE F+E  TPIL T      AR F        G    L 
Sbjct: 754 DQMQNLRLRTAVIKALRARLDAEGFLEVETPILHTVHGGASARPFRTYINAY-GEDLTLR 812

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            AP+ Y + L+  G    +++   FR+E   +   P EF  L+    + +   +    E 
Sbjct: 813 IAPELYLKRLVVGGSGPVYELGRDFRNEGADATHNP-EFTVLEAYRPYADYVQMRELTER 871

Query: 256 VLRGVFEEFSN 266
           +++   +    
Sbjct: 872 LIKDAAQAVFG 882



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 63/189 (33%), Gaps = 28/189 (14%)

Query: 381  IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL--GIINCNCFEFCWIM 438
               +EA+  R+D+Q                         I +EL   ++  +  E  +  
Sbjct: 912  DALSEALGRRVDVQTDFEELLALAQQHGVRVHEGMGPGAIVEELYGELVEAHTVEPTFYT 971

Query: 439  DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            DFP      E   +   H                  +   A ++DLV NG E+       
Sbjct: 972  DFP-----AETSPLAAPHR----------------SVPGLAERWDLVINGMEMGCAYSEL 1010

Query: 499  HMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
                V  +  +   +                  A + GMPP GG+  G+DR+VMLL   +
Sbjct: 1011 ADPLVQRERLTEQSLKAASGDLEAMEVDEDFLYALETGMPPTGGLGLGVDRLVMLLAQTQ 1070

Query: 555  NVREVSLFP 563
             +R V  FP
Sbjct: 1071 -IRGVLSFP 1078


>gi|195381141|ref|XP_002049313.1| GJ20822 [Drosophila virilis]
 gi|194144110|gb|EDW60506.1| GJ20822 [Drosophila virilis]
          Length = 460

 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 61/286 (21%), Positives = 109/286 (38%), Gaps = 36/286 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             +  G  +++ GW+  VR     IFLDI D     +               +    V+ 
Sbjct: 19  NATKPGDTLQIQGWIKNVRRLKNNIFLDISDGSTSEKFQLVVPRNL--DTHQLTLGSVVS 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFL 131
             G V              G  EL A +++ L+    +   P   ++++P     ++  L
Sbjct: 77  AVGRVQLAP---------NGHYELHADEVKALAEGHVQSGYPFSPKQKHPPEYVREHLHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP-------- 183
             R D +   +  R +   ++   M A NF++ +TPILT +  EGA +            
Sbjct: 128 RSRIDYIAAQMRIRHKAQKAIHDYMDALNFVQINTPILTTNDCEGAGEVFRVQPDSERLL 187

Query: 184 ------------SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                       S  +Q  F  L  + Q + +  M+ G    +  AP FR E+ +S    
Sbjct: 188 KQMARPNVPPEQSYFDQKVF--LSVSGQLHLE-AMSYGLGNTYTFAPAFRAENSKSPLHL 244

Query: 232 GEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            EFY  + E+  +EQ D +   +E +L+ +     N +    +F +
Sbjct: 245 AEFYMFEAELVHIEQLDTLAAFIERMLKDITNRLLNSSASDLHFCQ 290



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 56/149 (37%), Gaps = 30/149 (20%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           QEL ++  +C    +++++P                PF M       +  +D   + A  
Sbjct: 339 QELFLV-AHCGAPVFVLNWP------------TQQKPFYMK------ISRSDPQRVHAL- 378

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+     E+  G +R   +E++             +           + G  P GG  
Sbjct: 379 -DLLMPSVGELCGGSLRECDAELLAAH--------PQLPKDLAWYVDLRKYGGLPTGGFG 429

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G +R + LL G KN+R+V  +P   + C
Sbjct: 430 MGFERYLQLLTGVKNIRDVIPYPRYPHSC 458


>gi|322708418|gb|EFY99995.1| hypothetical protein MAA_04924 [Metarhizium anisopliae ARSEF 23]
          Length = 558

 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 63/304 (20%), Positives = 115/304 (37%), Gaps = 49/304 (16%)

Query: 7   HSCGDLGVSDVGSFV---RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
            +  DL      + V   +L GWV  VR   G  F+DI D   +  V    D A   +A 
Sbjct: 38  KTVADLRAWHPETNVPDVQLCGWVRSVRKSSGARFVDITDGSSMRPVQVVVDKA---LAA 94

Query: 64  SVRSEWVLCIDGLVM----------------------------SRSAETINANIITGQIE 95
            +R    +C+ G                               +   E       T Q E
Sbjct: 95  DIRPGSAVCLQGRWHNAADMKQPSTEGSSVSDISSQHTQSVSGADGMEQGAGRPPTIQ-E 153

Query: 96  LSAQKIEILSVAEELPL---------PVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRT 146
           L   ++++L V++             P+  + + PES+R+    L  R       +  R+
Sbjct: 154 LQVDEVKVLGVSDPQWHANIASAKTYPIQNKYQTPESLRY-ISHLRSRTPLNSTLLRLRS 212

Query: 147 RIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ---APQQYKQ 203
                +      + F +   PI+T+S  EGA +       ++  F+  P+      Q   
Sbjct: 213 DATFILTQFFFNQKFQQTHPPIITSSDCEGAGEAFTVKTGSKAEFFRDPKYLTVSTQLHL 272

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFE 262
             +A      + ++P FR E   + R   EFY L+ EMSFV + +++++ ++++L+ + +
Sbjct: 273 EALAQSLGDVWTLSPTFRAEQSDTSRHLSEFYMLEAEMSFVNDMNEVMDLVQSMLKNLAQ 332

Query: 263 EFSN 266
               
Sbjct: 333 GLKG 336



 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 66/173 (38%), Gaps = 23/173 (13%)

Query: 404 GDPLKFCSFAADARNHIAQELGIINCN-CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMP 462
             P+      ++   ++A+E+G    N  +   +I  +P      E K      +  + P
Sbjct: 402 HKPIWGSGLQSEHEKYLAKEIGFDKTNNAYLPVFITQYP-----REIKAFYMLRSASSPP 456

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHM-SEVMLQAFSNVGISKEVVEN 520
           QG                 +DL+     E+A G +R H  SE+      +        ++
Sbjct: 457 QGETVE------------CFDLLVPSLGELAGGSMREHRLSELEDNMKLHGLEVPGKRQD 504

Query: 521 R---FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           R    G      + G PPHGG   G DR++  L G  NVR+V  FP     CD
Sbjct: 505 RSSGLGWYLDLRRWGCPPHGGFGLGFDRLLSYLTGVANVRDVVPFPRHYQRCD 557


>gi|296815388|ref|XP_002848031.1| asparaginyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238841056|gb|EEQ30718.1| asparaginyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 580

 Score =  140 bits (352), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 60/327 (18%), Positives = 122/327 (37%), Gaps = 28/327 (8%)

Query: 33  HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITG 92
              +IFL + D YG+ Q V   D      A ++  E  + I G + +   +    +    
Sbjct: 170 QKDMIFLTLSDGYGLLQCVFTGDLTRTYDAMTLTLETSMAIHGEMRAVPVKQHAPDNR-- 227

Query: 93  QIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIIN 150
             EL A   +++  A  ++  +      +         R L LR +T    +  R  ++ 
Sbjct: 228 --ELHADFFQVIGRAAGDKEAITTRVAADADPQTLLDNRHLVLRGETSSSVLKVRAAVVR 285

Query: 151 SMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF 210
           + R     +  +E + P +  +  EG       +   + ++  L Q+ Q Y +  +AS  
Sbjct: 286 AFRKTFEQKQMLEVTPPAMVQTQVEGGSTLFEFNYYGEKAY--LTQSSQLYLETCLAS-L 342

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF--------- 261
              F I P FR E   + R   E+  ++ E+ F+  +D+L+ +E ++  V          
Sbjct: 343 GDVFCICPSFRAEKSLTRRHLSEYTHIESELDFITFNDLLDHIEEIICSVIDISLADPQI 402

Query: 262 ----EEFS-NGNTVSNNFLRICYDDAIRR---YGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
               ++ + +    +  F R+ Y +AI     +G +  + +      ++ E        +
Sbjct: 403 AAFVKQLNPDFQPPARPFRRMRYSEAIEWLTEHGINNEEGKPHSFGDDIAEAAERKMTDI 462

Query: 314 FSKI--LSVNPGYEVWAIPAKGGGGNR 338
            +K   L+  P         K     R
Sbjct: 463 INKPILLTHFPAEIKAFYMKKDAEDPR 489



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 13/115 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M +         D    ++   D++  G  EI  G +R    + ++ A+ 
Sbjct: 471 HFPAEIKAFYMKKDA------EDPRVTESV--DVLMPGVGEIVGGSMRMDDWDELMGAYK 522

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             G+        +       + G  PHGG   G++R +  + G   VRE SL+P 
Sbjct: 523 KEGMDPTP----YYWYTDQRKYGTSPHGGYGIGLERFLAWMCGRYTVRECSLYPR 573


>gi|303390853|ref|XP_003073657.1| asparagine-tRNA ligase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302804|gb|ADM12297.1| asparagine-tRNA ligase [Encephalitozoon intestinalis ATCC 50506]
          Length = 447

 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 65/366 (17%), Positives = 126/366 (34%), Gaps = 43/366 (11%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y+      L   ++G  +R  GWV  VR    I F+D+  HY   + V            
Sbjct: 17  YKRIELSKLTKENIGQKIRTFGWVTNVRSQSSITFIDLYAHYKTVKCVYPKKMH------ 70

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            +     + I G V     +         + E+  +K+EI + A     P+    E   +
Sbjct: 71  -LTMCTSMTIYGTVAENFGKKDAY-----EFEIQVEKVEIYNDAIAPSFPL--NEESSVN 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
                  L LR       +  R  ++  +R    A+ + E + P +  +  EG       
Sbjct: 123 AILTNAHLALRTKKRQLFLKARGYLLKIIRDFYFAKEYTEITPPTMVQTQVEGGSTLFKL 182

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + ++  L Q+ Q Y + ++     R + I P +R E  R+ R   E+  ++ E++ 
Sbjct: 183 DYYGEDAY--LTQSSQLYLETVVPVSH-RAYCIMPSYRAEKSRTRRHLSEYTHVEAELAD 239

Query: 244 VEQDDILNTMENVLRGVFEEFSN---------------GNTVSNNFLRICYDDAIRRYG- 287
           ++  ++++++E+++    E+F                        F +I Y +AI     
Sbjct: 240 IDFSELMSSIESLISYSMEKFYEGMKDDILSLYPKFEFHKIPKTPFKKIKYSEAIDFLNS 299

Query: 288 -----TDKPDLRNPIIMHNVTEHF----VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
                 D  D      + +  E +    +     VF     V      +    KG     
Sbjct: 300 KGYKKEDGTDFEIGDDIPDAAERYIVEAIGDGCPVFLTNFLVE-QKPFYMRKDKGNKDWT 358

Query: 339 AFCDRM 344
              D +
Sbjct: 359 ESVDLL 364



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 13/115 (11%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKE 516
           PF M +         D         DL+  G  EI  G +R  + E +++ F    I+  
Sbjct: 345 PFYMRK----DKGNKDWTESV----DLLFPGIGEILGGSMRQDIYEDLIEGFKREDINI- 395

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
              + +       + G   HGG   G +R +M L+  +NV E +L+P   + C  
Sbjct: 396 ---DPYYWYLDMARFGPCKHGGYGLGFERFLMGLMRYENVDEATLYPRKVSRCQP 447


>gi|70945583|ref|XP_742595.1| aspartyl-tRNA synthetase [Plasmodium chabaudi chabaudi]
 gi|56521667|emb|CAH75640.1| aspartyl-tRNA synthetase, putative [Plasmodium chabaudi chabaudi]
          Length = 417

 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 65/271 (23%), Positives = 108/271 (39%), Gaps = 19/271 (7%)

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSV---- 106
             N D    +   ++  E ++ I G ++     +I++ II  + E+  QKI  +S     
Sbjct: 6   NINNDKNMIKWVSNLSLESIVDIYGKLVK-PEISIDSTII--KYEIHIQKIFCISKNSKE 62

Query: 107 -------AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE 159
                  A              +  R   R +DLR    +     ++ I    R  +I  
Sbjct: 63  LPFLLKDANMKETNDEATIRVNQDNRLNNRCIDLRTYANYSIFYLQSEICKIFRNYLIDN 122

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPC 219
           NF E  TP L   S EG  +    +  NQ  F A  Q+PQ YKQ+ + SGFDR F+IAP 
Sbjct: 123 NFTEIHTPKLLGESSEGGANAFQINYFNQNGFLA--QSPQLYKQMCINSGFDRVFEIAPV 180

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
           FR E+  + R   E+  LD+EM++  +  + +   +++ + +F +  N          I 
Sbjct: 181 FRAENSNTYRHLCEYVSLDVEMTYKFDYMENVYFYDSMFKNIFNKLVNNEKNQLFIKNIK 240

Query: 279 YDDAIRRYGT--DKPDLRNPIIMHNVTEHFV 307
                  +      P       +  + EH  
Sbjct: 241 NQYPSEDFKWLAVTPIFTYEQAIKILIEHKK 271



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 56/155 (36%), Gaps = 28/155 (18%)

Query: 420 IAQELGIINCNCFE--FCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLS 476
           + +ELG I        +  I++FP                PF TM       +       
Sbjct: 288 MEKELGKIIKQTHNTDYYIIINFP------------SGLRPFYTMYNEEDPKI------- 328

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  YD    G EI SG  R    +V+L       ++      +      +F     PH
Sbjct: 329 --SNSYDFFMRGEEILSGSQRISDVKVLLDNIKKFNLNP----KKLDFYIDSFAYSSYPH 382

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G   G++R++ML LG  N+R+ SLFP        
Sbjct: 383 SGCGIGLERVLMLFLGLNNIRKTSLFPRDPKRLTP 417


>gi|239608737|gb|EEQ85724.1| asparaginyl-tRNA synthetase Slm5 [Ajellomyces dermatitidis ER-3]
          Length = 557

 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 57/276 (20%), Positives = 108/276 (39%), Gaps = 31/276 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             S     +R+ G++  VR      F +I D   I  V A         A  + +   + 
Sbjct: 50  SSSLDNRQIRVQGFIRSVRKQKRFAFAEISDGSTIKSVQA---ILTPAQAARLSTGSAID 106

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G+     A    ++      EL A +++I   A+        E+ +      +   L 
Sbjct: 107 ISGVWQPCPAGKKQSH------ELHATEVKITGEADP-------EKYHSPDFLRQIPHLR 153

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFLVPSRVNQ- 188
           LR          R+  I  +     +    NF++   P++T+S  EGA +    +  ++ 
Sbjct: 154 LRTPFNSLLSRFRSECIFQLGQVFHSRLGSNFVQVQPPLITSSDCEGAGEVFTVAPGDKV 213

Query: 189 -----GSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                G F+  P+    + Q + +   A+     + ++P FR E   + R   EFY L++
Sbjct: 214 GDGEKGEFFRSPKYLTVSSQLHLE-AYAAELGNVWTLSPTFRAEKSDTPRHLSEFYMLEV 272

Query: 240 EMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVSNNF 274
           EM+FV   D + +T+E+++R + +           F
Sbjct: 273 EMNFVHSLDSLTDTVESLIRDLTKRLYESPVAEEIF 308



 Score = 61.2 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 51/192 (26%), Gaps = 57/192 (29%)

Query: 418 NHIAQELGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM---------PQGGME 467
            H+  E  I++        ++  +P                PF M               
Sbjct: 371 LHLEHEKFIVDEVGKGCPVFVTHYP------------KMVKPFYMAPSIVLEEPSPASPA 418

Query: 468 SLKGNDLLSIKAF--QYDLVCNG-FEIASGGIRNHMSEVMLQAFSNVGI----------- 513
            L  +D          +DL+     E+  G IR H    ++Q     G+           
Sbjct: 419 ELSNHDPAQTMETVACFDLLMPEICEVVGGSIREHRLPNLIQNMREHGLIRKMPEAGPDA 478

Query: 514 ---------------------SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
                                  +             + G  PHGG   G DR +  L G
Sbjct: 479 DCASSSSHLAAEQGSSIYPYLQPDEYIGPMQWYADLRRWGSAPHGGFGLGFDRYLGYLAG 538

Query: 553 AKNVREVSLFPM 564
             ++R+V  FP 
Sbjct: 539 VSSLRDVVPFPR 550


>gi|261204059|ref|XP_002629243.1| asparaginyl-tRNA synthetase Slm5 [Ajellomyces dermatitidis
           SLH14081]
 gi|239587028|gb|EEQ69671.1| asparaginyl-tRNA synthetase Slm5 [Ajellomyces dermatitidis
           SLH14081]
          Length = 557

 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 57/276 (20%), Positives = 108/276 (39%), Gaps = 31/276 (11%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             S     +R+ G++  VR      F +I D   I  V A         A  + +   + 
Sbjct: 50  SSSLDNRQIRVQGFIRSVRKQKRFAFAEISDGSTIKSVQA---ILTPAQAARLSTGSAID 106

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G+     A    ++      EL A +++I   A+        E+ +      +   L 
Sbjct: 107 ISGVWQPCPAGKKQSH------ELHATEVKITGEADP-------EKYHSPDFLRQIPHLR 153

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFLVPSRVNQ- 188
           LR          R+  I  +     +    NF++   P++T+S  EGA +    +  ++ 
Sbjct: 154 LRTPFNSLLSRFRSECIFQLGQVFHSRLGSNFVQVQPPLITSSDCEGAGEVFTVAPGDKV 213

Query: 189 -----GSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                G F+  P+    + Q + +   A+     + ++P FR E   + R   EFY L++
Sbjct: 214 GDGEKGEFFRSPKYLTVSSQLHLE-AYAAELGNVWTLSPTFRAEKSDTPRHLSEFYMLEV 272

Query: 240 EMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVSNNF 274
           EM+FV   D + +T+E+++R + +           F
Sbjct: 273 EMNFVHSLDSLTDTVESLIRDLTKRLYESPVAEEIF 308



 Score = 61.2 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 51/192 (26%), Gaps = 57/192 (29%)

Query: 418 NHIAQELGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM---------PQGGME 467
            H+  E  I++        ++  +P                PF M               
Sbjct: 371 LHLEHEKFIVDEVGKGCPVFVTHYP------------KMVKPFYMAPSIVLEEPSPASPA 418

Query: 468 SLKGNDLLSIKAF--QYDLVCNG-FEIASGGIRNHMSEVMLQAFSNVGI----------- 513
            L  +D          +DL+     E+  G IR H    ++Q     G+           
Sbjct: 419 ELSNHDPAQTMETVACFDLLMPEICEVVGGSIREHRLPNLIQNMREHGLIRKMPEAGPDA 478

Query: 514 ---------------------SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
                                  +             + G  PHGG   G DR +  L G
Sbjct: 479 DCASSSSHLAAEQGSSIYPYLQPDEYIGPMQWYADLRRWGSAPHGGFGLGFDRYLGYLAG 538

Query: 553 AKNVREVSLFPM 564
             ++R+V  FP 
Sbjct: 539 VSSLRDVVPFPR 550


>gi|149570626|ref|XP_001520052.1| PREDICTED: similar to asparaginyl-tRNA synthetase, partial
           [Ornithorhynchus anatinus]
          Length = 224

 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 77/220 (35%), Gaps = 16/220 (7%)

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRII 149
             G  ELS    E++ +A           E    ++   R + +R + + K    R+ + 
Sbjct: 1   APGGHELSCDYWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGENMSKIFKARSAVT 60

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
              R       + E + P L  +  EG           + +F  L Q+ Q Y +  +   
Sbjct: 61  RCFREHFFDRGYCEITPPTLVQTQVEGGATLFKLDYFGEEAF--LTQSSQLYLETCIP-A 117

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS---- 265
               F IA  +R E  R+ R   E+  ++ E  F+  DD+LN +E+++  V +       
Sbjct: 118 LGDVFCIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFDDMLNRLEDLVCDVVDRVLKSPA 177

Query: 266 ---------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
                            F R+ Y DAI           + 
Sbjct: 178 ASLVYDLNPGFKPPKRPFKRMNYSDAIVWLKEHDVKKEDG 217


>gi|195335103|ref|XP_002034215.1| GM21746 [Drosophila sechellia]
 gi|194126185|gb|EDW48228.1| GM21746 [Drosophila sechellia]
          Length = 460

 Score =  140 bits (352), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 59/315 (18%), Positives = 121/315 (38%), Gaps = 41/315 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L  +  G  + + GW+  VR      FLDI D    ++             + +    V+
Sbjct: 18  LKTNKPGDSLAIQGWIKNVRRLKNNTFLDINDGSTSSRFQVVVPRTPEN--QHLAPGSVI 75

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130
              G +              G  EL A ++E+L+    +   P   ++++P     ++  
Sbjct: 76  AAVGEIQVAP---------NGSFELHANQVEMLAEGRLQEGYPFSPKQKHPPEYVREHLH 126

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP------- 183
           L  R D +   +  R +   ++   M  ++F++ +TP+LT +  EGA +           
Sbjct: 127 LRSRVDFVAAQMRVRHKAQKAIHDYMDEQDFVQINTPLLTTNDCEGAGEVFRVQPDSQDL 186

Query: 184 -------------SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                        S  +   F  L  + Q + +  M  G  + + ++P FR E+ +S   
Sbjct: 187 LKQMNRPNVPMEQSYFDSKVF--LSVSGQLHLE-AMTYGLGKTYTLSPAFRAENSKSPLH 243

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             EFY  + E++ +E+ + +   +E +L+ V       +    +F +   +       +D
Sbjct: 244 LAEFYMFEAELAHLEELEKLARFIEQMLKSVTSRLLETSGEDLSFCQRNSNS-----NSD 298

Query: 290 KPDLRNPIIMHNVTE 304
            P L+ P  + +  E
Sbjct: 299 LPWLQVPWKIMSYDE 313



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 54/149 (36%), Gaps = 30/149 (20%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           QEL ++  +C    +++D+P                PF M       +   +   + A  
Sbjct: 339 QELFLV-AHCGAPVFVVDWP------------VQQKPFYMK------VSRTNPNRVHAL- 378

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+     E+  G +R     ++         S   +           + G  P GG  
Sbjct: 379 -DLLMPAVGELCGGSLRESDPAIL--------KSHPQLPKDLEWYVDLRKYGGVPTGGFG 429

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G +R + L+ G KN+R+V  FP   + C
Sbjct: 430 MGFERYLQLVTGVKNIRDVIPFPRYPHSC 458


>gi|269219313|ref|ZP_06163167.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211460|gb|EEZ77800.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 1167

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/240 (20%), Positives = 94/240 (39%), Gaps = 17/240 (7%)

Query: 32  PHGGIIFLDIRDHYGITQVVANPDSACFEIA---KSVRSEWVLCIDGLVMSRSAETINAN 88
            HGG++F D+R+     QV+   D     +A   ++V    ++ + G             
Sbjct: 739 DHGGVLFADLREGGVELQVMFTADRPEAGLALWRETVDPGDLVRVAGTACRS-------- 790

Query: 89  IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTR 147
             +G++ + A+   + +     P P          +R + R +DL       + ++ R+ 
Sbjct: 791 -RSGELSVHAESWSMAAKCLT-PPPDKHRGLRDAEVRVRQRHMDLALGGEARRRLLARSA 848

Query: 148 IINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
            + ++R R+    F+E  TP+L        AR F             L  AP+ Y + L 
Sbjct: 849 AVRAIRGRLAEHGFVEVETPMLNRIHGGANARPFSTHINAYDLDL-TLRIAPELYLKQLC 907

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
             GF++ F+I   FR+E   S   P EF  L+   +  +   +    E+++R        
Sbjct: 908 VGGFEKIFEIGKNFRNEGADSTHNP-EFTALEAYEAHGDYTTMRRLAEDLIRTAAWAVHG 966



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 55/156 (35%), Gaps = 28/156 (17%)

Query: 412  FAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
             A D  + + +EL  +  +     +  DFP               +P T        L  
Sbjct: 1026 TAGDLVSELYEEL--VEGSTTAPTFYTDFP------------VETSPLTRRHRDDPRL-- 1069

Query: 472  NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYR 527
                   A ++DLV  G E+ +            Q  +   +                  
Sbjct: 1070 -------AERWDLVAFGMELGTAYTELTDPVDQRQRLTEQSLRAAAGDPEAMEVDEEFLS 1122

Query: 528  AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A + GMPP GG+  GIDRI M LLGA ++RE   FP
Sbjct: 1123 ALEFGMPPTGGLGLGIDRIAMFLLGA-SIRETLAFP 1157


>gi|195151145|ref|XP_002016508.1| GL10450 [Drosophila persimilis]
 gi|194110355|gb|EDW32398.1| GL10450 [Drosophila persimilis]
          Length = 460

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 62/344 (18%), Positives = 123/344 (35%), Gaps = 54/344 (15%)

Query: 1   MHRYRTHSCGDLGVSDV------GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           M   R   C    +S +      G  + + GW+  +R      FLDI D    ++     
Sbjct: 1   MLLIRRFYCSSQRISHIAKSNKRGDSLGIRGWIKNIRRLKNNTFLDIDDGSSSSRFQVVV 60

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLP 113
                   +++    V+   G +              G  EL A ++E L+    +   P
Sbjct: 61  PRNPE--TQNLTPGSVISAVGEIQVAP---------NGNFELHADRVESLAEGHLQDGYP 109

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
              ++++      ++  L  R D +   +  R +   ++   M   +F++ +TP++T + 
Sbjct: 110 FTPKQKHAPEYVREHLHLRSRVDYVAAQMRIRHKAQKAIHDYMDELDFVQINTPLMTTND 169

Query: 174 PEGARDFLV--PSRVNQGSFYALPQAP---------------QQYKQLLMASGFDRYFQI 216
            EGA +     P         A P  P                Q     M  G    + +
Sbjct: 170 CEGAGEVFRVQPDSEELLKQMARPNVPAEQSYFDSKVFLSVSGQLHLEAMTYGLGNTYCL 229

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           AP FR E+ +S     EFY  + E++ +++ + +   +E +L+ +       ++   +F 
Sbjct: 230 APAFRAENSKSPLHLAEFYMFEAELAHLDELEKLAKFIEQMLKSITNRVLETSSEDLHFC 289

Query: 276 R------------------ICYDDAIRRYGTDKPDLRNPIIMHN 301
           +                  + YDDA+     +K  L+ PI +  
Sbjct: 290 QRNANASSDLPWLTVPWTIMSYDDALHVLLANKESLKTPISLDE 333



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 47/137 (34%), Gaps = 29/137 (21%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             +++D+P                PF M       +  N+   + A   DL+     E+ 
Sbjct: 350 PVFVVDWP------------TQQKPFYMK------ITRNNPDRVHAL--DLLMPAVGELC 389

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G +R   +  +         S               + G  P GG   G +R + L+ G
Sbjct: 390 GGSLRESDAATLS--------SHPQFPKDLSWYVDLRKYGGIPTGGFGMGFERYLQLVTG 441

Query: 553 AKNVREVSLFPMSQNFC 569
            KN+R+V  FP   + C
Sbjct: 442 VKNIRDVIPFPRYPHSC 458


>gi|317036109|ref|XP_001397625.2| asparaginyl-tRNA synthetase Slm5 [Aspergillus niger CBS 513.88]
          Length = 543

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 103/270 (38%), Gaps = 27/270 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G S     ++L+G++  VR      F +I D   +  + A         A  + +   + 
Sbjct: 41  GSSLEDQEIQLNGFIRSVRKQKRFAFAEISDGSTVKPLQA---ILNPSQAAELSTGTAVE 97

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G+  +        +      EL A  + I+   +    P+  +   PE +R +   L 
Sbjct: 98  ISGVWKACPPGKEQTH------ELQATSVNIVGKTDPETYPIQKKYHSPEFLR-QIPHLR 150

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAEN---FIECSTPILTASSPEGARDFLVP------ 183
           +R          R+  +  +           F++   P++T+S  EGA +          
Sbjct: 151 IRTPFNSLLSRFRSECLYQLGNVFRHAPNGGFVQVHPPLITSSDCEGAGETFTVLPREAV 210

Query: 184 --SRVNQGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
             +  +   F+  P+    + Q + +   A+     + ++P FR E   + R   EFY L
Sbjct: 211 GTTPADGDHFFRAPKYLTVSSQLHLE-AYAAELGNVWTMSPMFRAEKSDTPRHLSEFYML 269

Query: 238 DMEMSFVEQDD-ILNTMENVLRGVFEEFSN 266
           + E +F++  D + + +E +LR +     +
Sbjct: 270 EAEANFMDNLDTLTDLVEYLLRDLTRRLYD 299



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 67/217 (30%), Gaps = 52/217 (23%)

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN-CNCFEFCWIMDFPF 442
           TEAI +  D    DS  F      +        +     E  I++  N     ++ D+P 
Sbjct: 348 TEAIELLQDAVAKDSATFEYPPTWE-----GGLQLE--HEKYIVDVLNHGHPVFVTDYP- 399

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHM- 500
                          PF M      S       ++    +DL+     E+A G +R H  
Sbjct: 400 -----------KPIKPFYMA-PSHASAATTHGETVAC--FDLLLPEVSEVAGGSLREHRL 445

Query: 501 SEVMLQAFSNVGISK---------------EVVENRFGGLY------------RAFQCGM 533
            E++     +  I                 +  E  +  L                + G 
Sbjct: 446 PEIIQNMRQHGLIKNLAASGDGTDPATPTFQQAEELYPHLLPGEDLGHLQWYADLRRWGT 505

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            PHGG   G DR +  L G  +VR++  FP      D
Sbjct: 506 APHGGFGLGFDRFLGYLAGVSSVRDIVAFPRYFGRAD 542


>gi|194756652|ref|XP_001960590.1| GF11428 [Drosophila ananassae]
 gi|190621888|gb|EDV37412.1| GF11428 [Drosophila ananassae]
          Length = 460

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/286 (19%), Positives = 107/286 (37%), Gaps = 36/286 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             S  G  + + GW+  VR      FLDI D    T+             + +    V+ 
Sbjct: 19  KSSKPGDSLSIQGWIRNVRKLKSHTFLDINDGSTSTKFQVVVPKTPEN--QHLAPGSVIS 76

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFL 131
            +G +              G  EL A  +E L+    +   P   +++ P     ++  L
Sbjct: 77  AEGQIQVAP---------NGSYELHASHVETLADGHLQEGYPFAPKQKLPPEYVREHLHL 127

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP-------- 183
             R D +   +  R +   ++   M   +F++ +TP+LT +  EGA +            
Sbjct: 128 RSRVDYIAAQMRIRHKAQKAIHDYMDELDFVQINTPLLTTNDCEGAGEVFRVQPDSEALL 187

Query: 184 ------------SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                       S  ++  F  L  + Q + +  M  G    +  +P FR E+ +S    
Sbjct: 188 KTMAKPNVPAEQSYFDEKVF--LSVSGQLHLE-AMTYGLGNTYTFSPAFRAENSKSPLHL 244

Query: 232 GEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            EFY  + E+S +++ D +   +E +L+ +       ++   NF +
Sbjct: 245 AEFYMFEAELSHLKEVDKLAAFIEQMLKSITTRLLESSSDDLNFCQ 290



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 48/138 (34%), Gaps = 29/138 (21%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              +++D+P                PF M       +  ++   + A   DL+     E+
Sbjct: 349 APVFVVDWP------------AQQKPFYMK------VSRSNPNRVHAL--DLLMPAVGEL 388

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R     V+         S   +           + G  P GG   G +R + L+ 
Sbjct: 389 CGGSLRESDPSVLS--------SHPQLPKNLSWYVDLRKYGGVPTGGFGMGFERYLQLVT 440

Query: 552 GAKNVREVSLFPMSQNFC 569
           G KN+R+V  FP   + C
Sbjct: 441 GVKNIRDVIPFPRYPHSC 458


>gi|307111559|gb|EFN59793.1| hypothetical protein CHLNCDRAFT_33640 [Chlorella variabilis]
          Length = 405

 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 20/188 (10%)

Query: 93  QIELSAQKIEILSVAEELPLPVFG-----------------EREYPESIRFKYRFLDLRR 135
           Q+EL    I ++S +  LP  V                        + +R   R++DLR 
Sbjct: 34  QVELQVTAIHVVSRSAPLPFEVTDAARSAEAVRKAAEAGKVLVTVGQDVRLDNRYVDLRT 93

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
                    ++ + +  R  +  + FIE  TP L + + EG            G    L 
Sbjct: 94  PANQAIFRVQSAVCHLFRESLQGQGFIEIHTPKLLSGASEGGAAVFHFDY--MGRPGCLA 151

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTME 254
           Q+PQ YKQ+ + S   R F+I P FR E+  + R   EF  LDMEM+  E   ++L+ ++
Sbjct: 152 QSPQFYKQMAICSDLARVFEIGPVFRAENSYTHRHLCEFTGLDMEMAIHESYHEVLDVLD 211

Query: 255 NVLRGVFE 262
            +   +F+
Sbjct: 212 ALFVHMFK 219



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 22/158 (13%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
            D    + + LG +  + +      +F          +   A  PF       ++     
Sbjct: 270 GDLNTELERALGKLVKDKYN----TEFYMLH------RYPLAIRPFYTMPCKDDNR---- 315

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                +  + +   G EI SG  R H   ++ Q    +G+  + +++       +F+ G+
Sbjct: 316 ----YSCSFVIFIRGEEIISGAQRVHDPVLLTQRAVELGLPVDTIQS----YIDSFKYGV 367

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PPHGG   G++R+VML  G  N+R+ S+FP        
Sbjct: 368 PPHGGAGVGMERVVMLFCGLDNIRKTSMFPRDPKRLTP 405


>gi|156093777|ref|XP_001612927.1| asparagine - tRNA ligase [Plasmodium vivax SaI-1]
 gi|148801801|gb|EDL43200.1| asparagine - tRNA ligase, putative [Plasmodium vivax]
          Length = 584

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 72/471 (15%), Positives = 142/471 (30%), Gaps = 106/471 (22%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWV 70
             +   + + GW   VR  GG    F+++ D       QV+ +     +E          
Sbjct: 78  EYIDQVITVCGWSKAVRKQGGGRFCFVNLNDGSCHLNLQVIVDQSIDNYEKLLKCGVGCC 137

Query: 71  LCIDGLVMSRSAETINANIITGQ-IEL-----SAQKIEILSVAEELPLPVFGEREYPESI 124
               G ++    +      +  + +EL     S    EI     +       ++ + +  
Sbjct: 138 FRFTGKLIISPVQNEEKKGLLKENVELALKDNSIHNFEIYGENLDPQKYPLSKKNHGKEF 197

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
             +   L  R   +   I  R  +  +      +  F+   TP++T S  EG  +    +
Sbjct: 198 LREVAHLRPRSYFISSVIRVRNALATATHLFFQSRGFLYVHTPLITTSDCEGGGEMFTVT 257

Query: 185 RVN--QGSFYALP---------------------------------------QAPQQYKQ 203
            +      + A+P                                       Q    YK+
Sbjct: 258 TLLGEDADYGAIPRVRKAVKGGQKREDNVQSAGQSAGQSASVGADTHGAPPAQYLIDYKK 317

Query: 204 -------LLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                   L  SG              +   P FR E+  + R   EF+ ++ E++F + 
Sbjct: 318 DFFNKQAFLTVSGQLSLENLCSSMGDVYTFGPTFRAENSHTSRHLAEFWMIEPEIAFADI 377

Query: 247 DDILNTMENVLRGVFEEFSNGNTV---------------------SNNFLRICYDDAIRR 285
            D +   E+ ++         N                         NF +I Y + I  
Sbjct: 378 YDNMELAESYIKYCIGYVLKNNFDDIYYFEENVEKGLISRLRNILDENFAKITYTNVIDL 437

Query: 286 YGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
                     P+   M   +EH      ++F K + V    +            +AF  +
Sbjct: 438 LMPFSNQFEVPVKWGMDLQSEHERFVAEQIFKKPVVVYNYPKDL----------KAFYMK 487

Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
           +NE      Q  +A +   + + G V G      +L +++   +  +L+M+
Sbjct: 488 LNE-----DQKTVAAMDVLVPKIGEVIGGSQREDNLELLDKMIVEKKLNME 533



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    E+  G  R    E++ +      ++       +    +  + G  PH G   G 
Sbjct: 501 LVPKIGEVIGGSQREDNLELLDKMIVEKKLNM----ESYWWYRQLRKFGSHPHAGFGLGF 556

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R++ML+ G  N+++   FP 
Sbjct: 557 ERLIMLVTGVDNIKDTIPFPR 577


>gi|307127751|ref|YP_003879782.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306484813|gb|ADM91682.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 227

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 80/223 (35%), Gaps = 24/223 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI-TQVVANPD----------SACFEIAKSV 65
           VG  V +  WV      G I FL +RD       V   P+             F++ K +
Sbjct: 14  VGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRL 73

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
             E  + + G+V                 EL    IE++  +++ P+     +E+     
Sbjct: 74  SQETSVYVTGIVKEDERSKF-------GYELDITDIEVIGESQDYPITP---KEHGTDFL 123

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
              R L LR       +  R  II +         F++  +PIL+ ++ E + +      
Sbjct: 124 MDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDY 183

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              G+   L Q+ Q Y +   A    R F   P FR E  ++ 
Sbjct: 184 F--GTPAYLSQSGQLYLE-AGAMALGRVFDFGPVFRAEKSKTR 223


>gi|300214471|gb|ADJ78887.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 385

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 59/291 (20%), Positives = 105/291 (36%), Gaps = 35/291 (12%)

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
              F +AK V+ E  L + G++           I   +IE+  +                
Sbjct: 7   EETFALAKEVKQETSLYVTGVIHEDKRSHFGYEIEIEEIEVVGES----------NEYPI 56

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
             +E+       +R L LR       +  R  +I +       E FI+   PILT S+PE
Sbjct: 57  TPKEHGTDFLMDHRHLWLRSKKQFAIMQIRNEMIRATYEFFNKEGFIKLDAPILTGSAPE 116

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           G  +       ++ ++  L Q+ Q Y +   A  + + F   P FR E  ++ R   EF+
Sbjct: 117 GTTELFHTEYFDRDAY--LSQSGQLY-EEAGAMAYGKVFSFGPTFRAEKSKTRRHLIEFW 173

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV----------------SNNFLRICY 279
            ++ EM+F+ Q++ L   E  +  + +   +                       + RI Y
Sbjct: 174 MIEPEMAFMHQEESLEIQERYVAYLVQSVLDNCQYPLQILGRDTEVLKRYTELPYPRISY 233

Query: 280 DDAIRRYGTD--KPDLRNPIIMHNVTE----HFVHSEFRVFSKILSVNPGY 324
           D+AI         PD++      +  E            V +   ++ P Y
Sbjct: 234 DEAIELLQQSGKFPDVKWGEDFGSPEETYLAEHFSKPVFVMNYPKAIKPFY 284



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 46/137 (33%), Gaps = 16/137 (11%)

Query: 440 FPFYEWNEE----EKKIDFAHN---PFTMPQGGMES---LKGNDLLSIKAFQYDLVCN-- 487
           FP  +W E+    E+     H     F M          +K +          D++    
Sbjct: 246 FPDVKWGEDFGSPEETYLAEHFSKPVFVMNYPKAIKPFYMKPHPTRDDVVICADMLAPEG 305

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIV 547
             EI  G  R    + + +     G+  +  E          + G  PH G   G++R V
Sbjct: 306 YGEIIGGSERATDPKYLEEQIIKAGLDVKDYE----WYLDLRRYGSVPHSGFGLGLERAV 361

Query: 548 MLLLGAKNVREVSLFPM 564
             + G  ++RE   FP 
Sbjct: 362 TWITGEDHIREAIPFPR 378


>gi|283458954|ref|YP_003363602.1| lysyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283135017|dbj|BAI65782.1| lysyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 1116

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 96/255 (37%), Gaps = 20/255 (7%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI----AKSVRSEWVLCI 73
            S   +SG V  +R H G++F+ + +     QVV         +    A ++ +  ++ +
Sbjct: 673 DSEFIVSGRVRALRKHSGVLFITLVEGTKTLQVVMERSLVGERLLNLAAHALDTGDIITV 732

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G   +    T           L A    + S +     P+  +       R + R  DL
Sbjct: 733 QGTYGASRNGTE---------SLIASTWHMASKSL---HPIPFDSFTDPEARLRRRSTDL 780

Query: 134 -RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
                  +N+  RT +I ++R R+  E F+E  TPIL T      AR F        G  
Sbjct: 781 LVHPDQMQNLRLRTAVIKALRARLDTEGFLEVETPILHTVHGGASARPFRTYINAY-GED 839

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  AP+ Y + L+  G    +++   FR+E   +   P EF  L+    + +   +  
Sbjct: 840 LTLRIAPELYLKRLVVGGSGPVYELGRDFRNEGADATHNP-EFTVLEAYRPYADYVQMRE 898

Query: 252 TMENVLRGVFEEFSN 266
             E +L+        
Sbjct: 899 LTECLLKDAARAVFG 913



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 63/189 (33%), Gaps = 28/189 (14%)

Query: 381  IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL--GIINCNCFEFCWIM 438
               +EA+  R+D+Q                         I +EL   ++  +  E  +  
Sbjct: 943  DALSEALGRRVDVQTDFEELLALAQQHGVRVHEGMGPGAIVEELYGELVEAHTVEPTFYT 1002

Query: 439  DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            DFP      E   +   H                  +   A ++DLV NG E+       
Sbjct: 1003 DFP-----AETSPLAAPHR----------------SVPGLAERWDLVINGMEMGCAYSEL 1041

Query: 499  HMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
                V  +  +   +                  A + GMPP GG+  G+DR+VMLL   +
Sbjct: 1042 ADPLVQRERLTEQSLKAASGDLEAMEVDEDFLYALETGMPPTGGLGLGVDRLVMLLAQTQ 1101

Query: 555  NVREVSLFP 563
             +R V  FP
Sbjct: 1102 -IRGVLSFP 1109


>gi|134083170|emb|CAK48622.1| unnamed protein product [Aspergillus niger]
          Length = 509

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 103/270 (38%), Gaps = 27/270 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G S     ++L+G++  VR      F +I D   +  + A         A  + +   + 
Sbjct: 41  GSSLEDQEIQLNGFIRSVRKQKRFAFAEISDGSTVKPLQA---ILNPSQAAELSTGTAVE 97

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G+  +        +      EL A  + I+   +    P+  +   PE +R +   L 
Sbjct: 98  ISGVWKACPPGKEQTH------ELQATSVNIVGKTDPETYPIQKKYHSPEFLR-QIPHLR 150

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAEN---FIECSTPILTASSPEGARDFLVP------ 183
           +R          R+  +  +           F++   P++T+S  EGA +          
Sbjct: 151 IRTPFNSLLSRFRSECLYQLGNVFRHAPNGGFVQVHPPLITSSDCEGAGETFTVLPREAV 210

Query: 184 --SRVNQGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
             +  +   F+  P+    + Q + +   A+     + ++P FR E   + R   EFY L
Sbjct: 211 GTTPADGDHFFRAPKYLTVSSQLHLE-AYAAELGNVWTMSPMFRAEKSDTPRHLSEFYML 269

Query: 238 DMEMSFVEQDD-ILNTMENVLRGVFEEFSN 266
           + E +F++  D + + +E +LR +     +
Sbjct: 270 EAEANFMDNLDTLTDLVEYLLRDLTRRLYD 299



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 62/189 (32%), Gaps = 30/189 (15%)

Query: 384 TEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN-CNCFEFCWIMDFPF 442
           TEAI +  D    DS  F      +        +     E  I++  N     ++ D+P 
Sbjct: 348 TEAIELLQDAVAKDSATFEYPPTWE-----GGLQLE--HEKYIVDVLNHGHPVFVTDYP- 399

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMS 501
                          PF M      S       ++    +DL+     E+A G +R H  
Sbjct: 400 -----------KPIKPFYMA-PSHASAATTHGETVAC--FDLLLPEVSEVAGGSLREHRL 445

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
             ++Q      +                + G  PHGG   G DR +  L G  +VR++  
Sbjct: 446 PEIIQNMRQHDLG------HLQWYADLRRWGTAPHGGFGLGFDRFLGYLAGVSSVRDIVA 499

Query: 562 FPMSQNFCD 570
           FP      D
Sbjct: 500 FPRYFGRAD 508


>gi|213409495|ref|XP_002175518.1| lysyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212003565|gb|EEB09225.1| lysyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 541

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/322 (19%), Positives = 138/322 (42%), Gaps = 25/322 (7%)

Query: 15  SDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-------DSACFEIAKSVR 66
                 V + G + R+R  G G++F DI  +    Q+  +         S C +    +R
Sbjct: 91  EHSQHKVSICGRLSRLRVFGSGLVFADIVQNGDSIQLAFSKLRFPDVEQSDCMKAVHCLR 150

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSA-QKIEILSVA-EELPLPVFGEREYPESI 124
              ++ + G V             +G++ +   +K  +L+   +++P  +   +EY +  
Sbjct: 151 RGDIVAVSGFV---------GTTKSGELTVFVDKKPTLLAPCLQDIPEKLNITKEYSKKQ 201

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
              Y    L       +I KR + I+S+R      +++E  TP+L+      A      +
Sbjct: 202 CLSY----LVNTDTADHIRKRFQTISSLRKYFTEHDYLEVETPVLSRHFGGAAARPFKST 257

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
            ++ GS  ++  AP+ + + L+ SGFDR F++  CFR+E   +   P EF   ++  ++ 
Sbjct: 258 DIH-GSPLSMRCAPEIWLKQLVISGFDRIFEVGKCFRNEGIDATHNP-EFTSCEIYTAYS 315

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
             +++     +VLR +F + +    V N+ L +    ++      +  L   + + + ++
Sbjct: 316 NLEELQEMTVDVLRFIFHQVNGSLQVPNSKLTLESFQSVSFLPALEKALGEELPVIDESD 375

Query: 305 HFVHSEFRVFSKILSVNPGYEV 326
           H   +   +F+K+    P  + 
Sbjct: 376 HCREALRHIFNKLQQALPQIQT 397



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 5/89 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVM-----LQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           + +++L  NG E+ +     +  +        Q         E +         A Q G+
Sbjct: 447 SLRFELYINGIELCNAYEEENDPDEQRRKFLQQVEKKDAFPNEDIVLPDEDYVNAMQYGL 506

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           PP  G   G+DR+ ML+ GA  + ++  F
Sbjct: 507 PPTAGWGIGVDRLCMLVAGATRINQILPF 535


>gi|39939240|ref|NP_951006.1| asparaginyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|59798546|sp|Q6YPH3|SYN_ONYPE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|39722349|dbj|BAD04839.1| aspartyl/asparaginyl-tRNA synthetase [Onion yellows phytoplasma
           OY-M]
          Length = 506

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/320 (18%), Positives = 103/320 (32%), Gaps = 57/320 (17%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHY---GITQVVANPDSACFEIAKSVRSEWV----- 70
             + L+GWV   R    +IF+D+ D      +  +     +   E A  +          
Sbjct: 18  KKIVLNGWVRNCRYQKKLIFIDLNDGTFLENLQIICKETKTKNIETAAEITEFHENQKVN 77

Query: 71  ----------------LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                           +   G  +         N      E+SAQ + +L  A +   P+
Sbjct: 78  TKNESPNNINLEKLKEMLQIGASLQVEGILKATNNPQTPFEISAQNVSLLG-ASDFSYPL 136

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
             ++     +R +   L +R          R     ++      + F   +TPI+TA+  
Sbjct: 137 QPKKHSKAFLR-QISHLRVRTKLFGAVFRIRNTAFFALHSFFQKKGFFHINTPIITANDG 195

Query: 175 EGARDFLVPSRVN----------------------------QGSFYAL---PQAPQQYKQ 203
           EGA +    + +N                            Q  F+       A  Q + 
Sbjct: 196 EGAGELFQLTTLNLEALPQTKNIPNASKLADETISKNEIDYQKDFFGKKVFLTATGQLEA 255

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
             MA G ++ +   P FR E   + R   EF+ L+ EM+F      L   + +L+ V  +
Sbjct: 256 EAMALGLNKVYTFGPTFRAEKSNTPRHAAEFWMLEPEMAFCNLSQNLKVAQEMLQFVIAK 315

Query: 264 FSNGNTVSNNFLRICYDDAI 283
               N     FL     + +
Sbjct: 316 CLEQNYQDIEFLDKTEKNCL 335



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 24/140 (17%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           +   +  +  +I+D+P     +E K     +NP        +++   DL         LV
Sbjct: 385 LTETHFKKPVFIVDWP-----KEIKAFYMKNNP------DQKTVAAMDL---------LV 424

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
               E+  G  R     V+++  + + I ++ +E          + G   H G   G +R
Sbjct: 425 PRVGELIGGSQREENLSVLIEKMNQMKIPQKDLE----WYLDLRRFGGCIHSGFGLGFER 480

Query: 546 IVMLLLGAKNVREVSLFPMS 565
           +++ L G  N+R+V  FP +
Sbjct: 481 LLIFLTGLDNIRDVIAFPRT 500


>gi|260906425|ref|ZP_05914747.1| lysyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 519

 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 71/350 (20%), Positives = 126/350 (36%), Gaps = 42/350 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSG-----------WVHRVRPHGGIIFLDIR--DHY---GIT 48
           RTH+  ++  S  G     +G            V  VR  G + F+ ++  D     G+ 
Sbjct: 48  RTHTLAEVHASHDGLE---AGDETEDIVGVVGRVVFVRTTGKLCFVTLQAGDGTRLQGML 104

Query: 49  QVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
            +    +    +    V     L I G V+             G++ + A    + S A 
Sbjct: 105 SLREVGEERLGDFKTDVDLGDFLFIHGKVIKSKR---------GELSVLADSWSMASKAL 155

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
                +    E  E  R + R+LDL  R+   K ++ R  +++S+R     ++F+E  TP
Sbjct: 156 RPLPGL--HTELAEDTRVRQRYLDLITREEARKTMLTRAEVMSSLRRTFAGQDFVEIETP 213

Query: 168 ILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +L        AR F           Y L  AP+ + +  +  G +  F+I   FR+E   
Sbjct: 214 MLQFMHGGAAARPFKTHMNAYDIDMY-LRIAPELFLKRAIVGGIENVFEINRNFRNEGAD 272

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           S   P EF  L+   S+ +   I +  + +++   +E +    V         D     +
Sbjct: 273 STHSP-EFAMLEAYQSYGDYHSIADLTKTLVQNAAQEATGSLVVKL------EDGEDYDF 325

Query: 287 GTDKP--DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           G D P   +   +   +  E    +   V  KI + N         + G 
Sbjct: 326 GGDWPVVSMYETLSAESGVEVTPETGLDVLDKIAADNNVDLGGVFRSHGK 375



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 52/143 (36%), Gaps = 26/143 (18%)

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
               +   ++ DFP      +   +   H                        ++DL   
Sbjct: 386 QDKLWAPTFVTDFPV-----DTSPLVREHR----------------TKKGVVEKWDLYVR 424

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGI 543
           GFE+A+G        +  + F          +    GL      A + GMPP GG+  G+
Sbjct: 425 GFELATGYSELVDPVIQRERFEAQAADAAKGDEEAMGLDEEFLTAMEHGMPPTGGMGMGL 484

Query: 544 DRIVMLLLGAKNVREVSLFPMSQ 566
           DR++M L G   +RE  LFP ++
Sbjct: 485 DRLLMALTGLG-IRETILFPFTK 506


>gi|149699380|ref|XP_001501660.1| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 3 [Equus caballus]
          Length = 423

 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 5/190 (2%)

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                   +  R++ R+LDL  +   +   + R++II  +R  +    F+E  TP++   
Sbjct: 83  HLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNII 142

Query: 173 SPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                A+ F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P
Sbjct: 143 PGGAVAKPFITYHNELDMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP 201

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF   +  M++ +  D++   E ++ G+ +     N       R   DD     G + P
Sbjct: 202 -EFTTCEFYMAYADYHDLMEITEKMISGMVK-LPETNLFETEETRKILDDICVAKGVECP 259

Query: 292 DLRNPIIMHN 301
             R    + +
Sbjct: 260 PPRTTARLLD 269



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 303 KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 362

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 363 YGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFPAMK 398


>gi|238581429|ref|XP_002389606.1| hypothetical protein MPER_11243 [Moniliophthora perniciosa FA553]
 gi|215452056|gb|EEB90536.1| hypothetical protein MPER_11243 [Moniliophthora perniciosa FA553]
          Length = 358

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 89/251 (35%), Gaps = 25/251 (9%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             VR+SGWVHR+R    I FL +RD  G  QVV +        A ++  E  + + G + 
Sbjct: 129 QRVRVSGWVHRLRQQKDITFLTLRDGTGFLQVVLSGRVNQTYQAVTLTLESTVELVGTLQ 188

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFLDLRRD 136
                        G  EL     +++  A   E         +   SI    R L LR +
Sbjct: 189 VVPEG----KTAPGGHELIVDYWQLVGAAPGAEDAFTNRLNEKSDPSILADLRHLVLRGE 244

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T       R  ++ + R      N +E +TP L  +  EG       +   Q        
Sbjct: 245 TSSSVFRLRAALLAAFRQAFAKLNCLEVTTPCLVQTMVEGGATLFELNYYGQP------- 297

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
                            +     FR E+  + R   E+   + E+ F+  D +++ +E+V
Sbjct: 298 ------------ALGDVYCFQESFRAENSHTRRHLAEYTHTEAEVGFITFDQLMDHIESV 345

Query: 257 LRGVFEEFSNG 267
           +    +   + 
Sbjct: 346 ICEAVDILLDN 356


>gi|221488174|gb|EEE26388.1| asparaginyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 676

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/397 (14%), Positives = 113/397 (28%), Gaps = 79/397 (19%)

Query: 21  VRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSE---WVLCIDG 75
           V + GW   VR  GG  + F+ + D    + +    ++        +            G
Sbjct: 194 VTVCGWSRSVRKQGGGSLCFVVLSDGSTSSNLQVVVEAGIGGEFPQLLKCGAGCSFRFTG 253

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++   A+     +          + EIL + +    P+  +    E +R +   L  R 
Sbjct: 254 DIVKSPAKGQAVELAVRDPS-KGHRFEILGMTDAAKYPLAKKEHTREYLR-EIAHLRPRS 311

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
             +   +  R+ +  +         F+   TPI+TAS  EGA +    S +         
Sbjct: 312 YLIGAVMRVRSNLAMATHRFFQDRGFLYIHTPIVTASDCEGAGEMFQVSTLLPPPPPETR 371

Query: 190 ------------------------------------SFYALP---QAPQQYKQLLMASGF 210
                                                F+  P       Q          
Sbjct: 372 ENEKKTDGAAPKDAAAAAAEPLIPLTKDKKGVDYSRDFFGRPAFLTVSGQLAVEPYCCSL 431

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
              +   P FR E+  + R   EF+ ++ E++F   +D +   E  ++   +   +    
Sbjct: 432 SDVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFATLEDNMVVAEAYVKFCVQWVLDNCRA 491

Query: 271 S---------------------NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
                                   F R+ Y +AI     ++P  +         +     
Sbjct: 492 DIEWFQKNQEEGLIARLENILAEPFARVSYTEAIDVLKAEEPKAQFK------EKVEWGM 545

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           +     +       Y+   I        +AF  ++NE
Sbjct: 546 DMGSEHERYLTENVYKKPCIVYNYPKDIKAFYMKLNE 582



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 5/95 (5%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              D  +++A    LV    E+  G  R    + +    +   +  +             
Sbjct: 580 LNEDGKTVRAMDV-LVPKIGELVGGSQREDDRDRLAAMIAAKDLDPKPYW----WYMELR 634

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + G  PH G   G +R+VML+ G +N+R+   +P 
Sbjct: 635 EYGTIPHAGFGLGFERLVMLVTGIENIRDTIPYPR 669


>gi|221508686|gb|EEE34255.1| asparaginyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 676

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/397 (14%), Positives = 113/397 (28%), Gaps = 79/397 (19%)

Query: 21  VRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSE---WVLCIDG 75
           V + GW   VR  GG  + F+ + D    + +    ++        +            G
Sbjct: 194 VTVCGWSRSVRKQGGGSLCFVVLSDGSTSSNLQVVVEAGIGGEFPQLLKCGAGCSFRFTG 253

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++   A+     +          + EIL + +    P+  +    E +R +   L  R 
Sbjct: 254 DIVKSPAKGQAVELAVRDPS-KGHRFEILGMTDAAKYPLAKKEHTREYLR-EIAHLRPRS 311

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
             +   +  R+ +  +         F+   TPI+TAS  EGA +    S +         
Sbjct: 312 YLIGAVMRVRSNLAMATHRFFQDRGFLYIHTPIVTASDCEGAGEMFQVSTLLPPPPPETR 371

Query: 190 ------------------------------------SFYALP---QAPQQYKQLLMASGF 210
                                                F+  P       Q          
Sbjct: 372 ENEKKTDGAAPKDAAAAAAEPLIPLKKDKKGVDYSRDFFGRPAFLTVSGQLAVEPYCCSL 431

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
              +   P FR E+  + R   EF+ ++ E++F   +D +   E  ++   +   +    
Sbjct: 432 SDVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFATLEDNMVVAEAYVKFCVQWVLDNCRA 491

Query: 271 S---------------------NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
                                   F R+ Y +AI     ++P  +         +     
Sbjct: 492 DIEWFQKNQEEGLIARLENILAEPFARVSYTEAIEVLKAEEPKAQFK------EKVEWGM 545

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           +     +       Y+   I        +AF  ++NE
Sbjct: 546 DMGSEHERYLTENVYKKPCIVYNYPKDIKAFYMKLNE 582



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 5/95 (5%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              D  +++A    LV    E+  G  R    + +    +   +  +             
Sbjct: 580 LNEDGKTVRAMDV-LVPKIGELVGGSQREDDRDRLAAMIAAKDLDPKPYW----WYMELR 634

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + G  PH G   G +R+VML+ G +N+R+   +P 
Sbjct: 635 EYGTIPHAGFGLGFERLVMLVTGIENIRDTIPYPR 669


>gi|237832839|ref|XP_002365717.1| asparaginyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211963381|gb|EEA98576.1| asparaginyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 676

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/397 (14%), Positives = 113/397 (28%), Gaps = 79/397 (19%)

Query: 21  VRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSE---WVLCIDG 75
           V + GW   VR  GG  + F+ + D    + +    ++        +            G
Sbjct: 194 VTVCGWSRSVRKQGGGSLCFVVLSDGSTSSNLQVVVEAGIGGEFPQLLKCGAGCSFRFTG 253

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            ++   A+     +          + EIL + +    P+  +    E +R +   L  R 
Sbjct: 254 DIVKSPAKGQAVELAVRDPS-KGHRFEILGMTDAAKYPLAKKEHTREYLR-EIAHLRPRS 311

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------ 189
             +   +  R+ +  +         F+   TPI+TAS  EGA +    S +         
Sbjct: 312 YLIGAVMRVRSNLAMATHRFFQDRGFLYIHTPIVTASDCEGAGEMFQVSTLLPPPPPETR 371

Query: 190 ------------------------------------SFYALP---QAPQQYKQLLMASGF 210
                                                F+  P       Q          
Sbjct: 372 ENEKKTDGAAPKDAAAAAAEPLIPLTKDKKGVDYSRDFFGRPAFLTVSGQLAVEPYCCSL 431

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
              +   P FR E+  + R   EF+ ++ E++F   +D +   E  ++   +   +    
Sbjct: 432 SDVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFATLEDNMVVAEAYVKFCVQWVLDNCRA 491

Query: 271 S---------------------NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
                                   F R+ Y +AI     ++P  +         +     
Sbjct: 492 DIEWFQKNQEEGLIARLENILAEPFARVSYTEAIEVLKAEEPKAQFK------EKVEWGM 545

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           +     +       Y+   I        +AF  ++NE
Sbjct: 546 DMGSEHERYLTENVYKKPCIVYNYPKDIKAFYMKLNE 582



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 5/95 (5%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              D  +++A    LV    E+  G  R    + +    +   +  +             
Sbjct: 580 LNEDGKTVRAMDV-LVPKIGELVGGSQREDDRDRLAAMIAAKDLDPKPYW----WYMELR 634

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           + G  PH G   G +R+VML+ G +N+R+   +P 
Sbjct: 635 EYGTIPHAGFGLGFERLVMLVTGIENIRDTIPYPR 669


>gi|145503091|ref|XP_001437523.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124404673|emb|CAK70126.1| unnamed protein product [Paramecium tetraurelia]
          Length = 506

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 78/399 (19%), Positives = 146/399 (36%), Gaps = 64/399 (16%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRD-HYGITQVVANPDSACFEIAK---S 64
              +  S +G  + L   +H  R  G I FL +R+  Y I  V+   +    ++ K    
Sbjct: 38  VSQINESTIGKTILLRARIHNSRMKGKIAFLVLRENWYTIQAVLTKGEQIGSQMIKYTGG 97

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE------- 117
           +  E V+ I+ +V+  + +  +    T Q+EL  Q I ++S +         E       
Sbjct: 98  INLESVVDIEAVVLQTNFKIKDC---TQQVELHIQTIRVISRSITKLPFQIEEASRKIID 154

Query: 118 ----------------------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155
                                  +  ++ R   R LDLR          ++ I    R  
Sbjct: 155 YYPNLQQQKQNEDQQQLIQIQDYQISQNQRLNNRVLDLRTPAKQAIFRVKSGIALLFRQF 214

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +I + FIE  TP L   + +           N  +F  L Q+  +YKQ+ + + F+R F+
Sbjct: 215 LIEKGFIEIHTPKLLGFNTKNNYCKFKLQYFNYQAF--LSQSSCKYKQMCLMADFERVFE 272

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMEN----VLRGVFEEF------ 264
           ++P FR     + R   EF  +D+EM   E   ++L+  E     +L+G+ ++F      
Sbjct: 273 VSPAFRALHGNTHRELCEFICMDLEMVIKENYTELLDLTEELCLFILKGIEKKFDQEIQI 332

Query: 265 ------SNGNTVSNNFLRICYDDAIRRYGT----DKPDLRNPII----MHNVTEHFVHSE 310
                      +    +++ Y DAI+          P     I     +  + +    ++
Sbjct: 333 IAKQFQFQPIKICYPIIKLTYFDAIKLLQEVGIVQSPQYYFCITNQKQLGKIVKEKYGTD 392

Query: 311 FRVFSKILSVNPGYEVWAIPA-KGGGGNRAFCDRMNEWA 348
           F + +++   N    +           +  F  R  E A
Sbjct: 393 FFILNRLPRENQNSCIMPCKVDPNFNLSYKFFLRGEEIA 431



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 4/88 (4%)

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            Y     G EIASG  R H  E +      +G   +++++       +F+ G  PHGG A
Sbjct: 420 SYKFFLRGEEIASGHQRIHDPEHLNNQLKGIGQDAQLLKD----YINSFRYGSYPHGGCA 475

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G++R + L    KN+R  SLFP   + 
Sbjct: 476 FGLERFLYLYFDLKNIRNASLFPRDSSR 503


>gi|300744054|ref|ZP_07073073.1| lysine--tRNA ligase [Rothia dentocariosa M567]
 gi|300379779|gb|EFJ76343.1| lysine--tRNA ligase [Rothia dentocariosa M567]
          Length = 1107

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 94/249 (37%), Gaps = 12/249 (4%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            LSG V  +R HGG+IFL + +     Q++A          + ++S       G ++  +
Sbjct: 669 TLSGRVRFIRNHGGVIFLTLSEEGKQVQIIAERSLVSEREFQLLKSA---VDTGDILLVT 725

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHK 140
                + I T    +     ++   A +   P+          R + R  DL       +
Sbjct: 726 GTAGASRIGTA--SVIVHGWQM---AAKCLHPIPYGALNDPEARIRKRSTDLLVHPQQLE 780

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           N+  R+ +I ++R  +    F E  TPIL T      AR F        G+   L  AP+
Sbjct: 781 NLRMRSSLITAIRRTLDDAGFTEVETPILNTIHGGASARPFKTFINAY-GADLTLRIAPE 839

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  G    +++   FR+E   +   P EF  L+    + +   +    E +++ 
Sbjct: 840 LYLKRLVVGGLGAVYELGRDFRNEGADATHNP-EFTVLEAYKPYADYTVMRKLTETLIKN 898

Query: 260 VFEEFSNGN 268
                    
Sbjct: 899 AARAVYGSE 907



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 51/161 (31%), Gaps = 30/161 (18%)

Query: 409  FCSFAADARNHIAQEL--GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGM 466
                       I +EL   ++        +  DFP      E   +  AH          
Sbjct: 965  VRDDMGA--GAILEELYGELVEAKTVFPTFYTDFPV-----ETSPLAGAHR--------- 1008

Query: 467  ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF---- 522
                          ++DLV NG E+ +       +    +  +   +     +       
Sbjct: 1009 -------SKPHLVERWDLVINGMEMGTAYSEMTDALEQRRRLTEQSLKAAAGDPEAMQID 1061

Query: 523  GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 A + G+ P GG+  GIDR+ ML+   + +R V  FP
Sbjct: 1062 EDFLYALETGLVPTGGLGIGIDRLAMLMAQTQ-IRGVLSFP 1101


>gi|66807931|ref|XP_637688.1| leucyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|60466120|gb|EAL64185.1| leucyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 615

 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/307 (18%), Positives = 113/307 (36%), Gaps = 54/307 (17%)

Query: 6   THSCGDLGVS------------DVGSFVRLSGWVHRVR-PHGGIIFLDIRD--------- 43
           TH+  +                D+   + L+G V  +R     ++F+DI           
Sbjct: 93  THTIKEFRKQFKDQLENGSKLTDIEQPIILAGRVKSIRISSNKLVFIDINSSLTNQEISY 152

Query: 44  ----------------------HYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
                                   G   +    D   ++ +    +  +    G ++  S
Sbjct: 153 TDIIQQQQQPQQNSDSNENSRIKGGQYSLQVMADKKFYKNSLEFENIILNLRRGDIIEVS 212

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLHK 140
              + A    G+I +   +I IL+            +   + IR++ R LD L   T  K
Sbjct: 213 G--LPAKTKVGEISIIPIEINILTPCVRPIPQ----KLIDKEIRYRNRPLDFLVNPTTQK 266

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
               R+++I  +R  ++ + ++E  TPIL T      A+ F   S       + L  +P+
Sbjct: 267 PFYIRSKMITYLRKFLVEKGYLEVDTPILSTNVGGANAKPFKTHSNSLNLDLF-LRISPE 325

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + L+ SGFD+ F+I   FR+E       P EF   +   ++ + + ++   E +L G
Sbjct: 326 LFLKQLIISGFDKVFEIGKQFRNEGIDLTHNP-EFTTCEFYQAYADYETMMTMTEELLSG 384

Query: 260 VFEEFSN 266
           +  +   
Sbjct: 385 MVYDTLG 391



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 4/93 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
           +  +++L   G E+ +     +  +   + F    + +   +            + +  +
Sbjct: 500 RTERFELFVGGKELVNAYSELNDPKEQRKRFLAQSMDRTSGDEEAQILDESFCNSLELAL 559

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           PP GG   GIDR+ ML      +++V LFP  +
Sbjct: 560 PPTGGWGLGIDRLCMLFSNTTTIKDVILFPTMK 592


>gi|195584094|ref|XP_002081850.1| GD11238 [Drosophila simulans]
 gi|194193859|gb|EDX07435.1| GD11238 [Drosophila simulans]
          Length = 460

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/315 (18%), Positives = 121/315 (38%), Gaps = 41/315 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L  +  G  + + GW+  VR      FLDI D    ++             + +    V+
Sbjct: 18  LKTNKPGDSLAIQGWIKNVRRLKNNTFLDINDGSTSSRFQVVVPRTPEN--QHLAPGSVI 75

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRF 130
              G +              G  EL A ++E+L+    +   P   ++++P     ++  
Sbjct: 76  AAVGEIQVAP---------NGSFELHANQVEMLAEGRLQEGYPFSPKQKHPPEYVREHLH 126

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP------- 183
           L  R D +   +  R +   ++   M  ++F++ +TP+LT +  EGA +           
Sbjct: 127 LRSRVDFVAAQMRVRHKAQKALHDYMDEQDFVQINTPLLTTNDCEGAGEVFRVQPDSQDL 186

Query: 184 -------------SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                        S  +   F  L  + Q + +  M  G  + + ++P FR E+ +S   
Sbjct: 187 LKQMNRPNIPIEQSYFDSKVF--LSVSGQLHLE-AMTYGLGKTYTLSPAFRAENSKSPLH 243

Query: 231 PGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
             EFY  + E++ +E+ + +   +E +L+ V       +    +F +   +       +D
Sbjct: 244 LAEFYMFEAELAHLEELEKLARFIEQMLKSVTSRLLETSGEDLSFCQRNSNS-----NSD 298

Query: 290 KPDLRNPIIMHNVTE 304
            P L+ P  + +  E
Sbjct: 299 LPWLQVPWKIMSYDE 313



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 54/149 (36%), Gaps = 30/149 (20%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           QEL ++  +C    +++D+P                PF M       +   +   + A  
Sbjct: 339 QELFLV-AHCGAPVFVVDWP------------AQQKPFYMK------VSRTNPNRVHAL- 378

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+     E+  G +R     ++         S   +           + G  P GG  
Sbjct: 379 -DLLMPAVGELCGGSLRESDPAIL--------KSHPQLPKDLEWYVDLRKYGGVPTGGFG 429

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G +R + L+ G KN+R+V  FP   + C
Sbjct: 430 MGFERYLQLVTGVKNIRDVIPFPRYPHSC 458


>gi|66823901|ref|XP_645305.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74857802|sp|Q559M9|SYDC2_DICDI RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic 2; AltName:
           Full=Aspartate--tRNA ligase 2; Short=AspRS 2
 gi|60473358|gb|EAL71304.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 569

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 71/364 (19%), Positives = 141/364 (38%), Gaps = 34/364 (9%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDH-YGITQVVANPDSACFE----- 60
           +  DL  S VG +V +   V  +R  G  + FL +RD    I  V++  D    +     
Sbjct: 84  NISDLNESCVGKYVLIRARVSNIRSFGNSLCFLQLRDGLSSIQAVISKNDENNSKSMIHF 143

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           I  ++  E ++ I+ ++ + S    +  I    +EL    + + S +       F +   
Sbjct: 144 INSTITKESIIDIEAILTNSSTPIESCIIKN--LELKIYSLFLQSKSNSSLPLQFDDLSK 201

Query: 121 PESI----------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
           P +                 R   R LDLR          ++ I N  R +++  +FIE 
Sbjct: 202 PTTYQNYDDNGYTYVIPLNSRLNNRCLDLRTFYNLSIFKIQSAISNLFRDQLLINDFIEI 261

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            +P +   S     +    +  N+ ++  L ++ Q Y+QL + S F R F+I P +R + 
Sbjct: 262 HSPKIIKQSI--NENSFKLNYFNEIAY--LSESTQFYRQLAIVSDFKRVFEIGPVYRTDL 317

Query: 225 PRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF-SNGNTVSNNFLRICYDDA 282
             + R   EF  LD EM+F +   ++L+ ++N++  +F+   +N                
Sbjct: 318 GHTHRHLNEFTSLDFEMTFKDHYHEVLDFLDNLMISIFKILETNYENELKIINNYQLQFE 377

Query: 283 IRRYGTDKPDLRN---PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
             ++ T  P        +++   +E+  +         L+V        I  +    +  
Sbjct: 378 KFKFSTKTPRFTFSEVKLMLIEFSENENNKFCMELFDYLNVQEERIFGKIVKEKFNVDYY 437

Query: 340 FCDR 343
             ++
Sbjct: 438 IIEK 441



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 55/165 (33%), Gaps = 36/165 (21%)

Query: 424 LGIINCNCFEF-CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQY 482
            G I    F    +I++ P  E+            PF +          N         +
Sbjct: 424 FGKIVKEKFNVDYYIIEKPSSEY-----------QPFYIMPDSNNEKLLN--------SF 464

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA-------------- 528
            +  NG +I SG  R H  +++ + + N  I+     N                      
Sbjct: 465 HIYINGEKIGSGSQRIHDWKLLEKRYKNYYINHNNNNNNNNNNNNNNNNNNNNNNIENYI 524

Query: 529 --FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             F+ G   H G + G++R+VM  LG +N+R+ S  P        
Sbjct: 525 NIFKFGCSQHAGCSIGLERLVMAYLGLENIRKASFCPRDPTRLTP 569


>gi|320094628|ref|ZP_08026390.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319978437|gb|EFW10018.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 531

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/297 (18%), Positives = 107/297 (36%), Gaps = 43/297 (14%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFE 60
            RY     G+     VG    ++G V  +R  G + F  + D  G   QV+ +  S   +
Sbjct: 45  QRYAHLEAGEETEDLVG----IAGRVVLMRNGGKLCFATLMDGAGEKIQVMFSAASVGAD 100

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQ--------------------- 99
              + +++  L   G  +      I++    G++ + A                      
Sbjct: 101 SLAAYKNDVDL---GDHLFVHGRVISSR--RGELSVFATPAEPTEQARAAYDAAPTALPA 155

Query: 100 ---KIEILSVAEELPLPVFGERE-----YPESIRFKYRFLDLRRDTLHKNIVK-RTRIIN 150
                 I S A       +  ++       E  R + R LDL      +++++ R  +  
Sbjct: 156 PDASWAIASKALRPLPKTWTTQDGKEITLSEDQRIRRRELDLITRPAARDMIRVRAAVNR 215

Query: 151 SMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
           S+R       +IE  TP+L        AR F           Y L  A + Y +  +  G
Sbjct: 216 SIRENFHRRGYIELETPMLQVVHGGAAARPFTTHMNALDMDLY-LRIATEIYLKRAVVGG 274

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
            DR F++   FR+E   S   P EF  L+   ++ + + + +   ++++    +  +
Sbjct: 275 VDRVFEMNRNFRNEGMDSSHSP-EFTSLEAYEAYSDYNGMADLTRDLIQQAARDAFD 330



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 64/199 (32%), Gaps = 32/199 (16%)

Query: 373 GPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCF 432
           G  ++ L    T        ++  +       D       +      I +EL  +    +
Sbjct: 359 GSTSEALGEEVTVETPRETLVKHAERIGLEVDDYAV----SGKIVEDIFEEL--VASKLW 412

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ DFP     E+   +   H                        ++DL   GFE  
Sbjct: 413 APTFVYDFP-----EDTSPLTRYHR----------------SRPGLTEKWDLYVRGFETG 451

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +         V  + F    ++    +            A + G PP GG+  GIDR++M
Sbjct: 452 TAYSELADPVVQRERFEAQALAAANGDPEAMVMDEDFLVAMEQGFPPCGGMGMGIDRLLM 511

Query: 549 LLLGAKNVREVSLFPMSQN 567
           +L G   +RE   FP+ + 
Sbjct: 512 VLTGQG-IRETIPFPLVKR 529


>gi|312083484|ref|XP_003143881.1| 63kd antigen [Loa loa]
 gi|307760954|gb|EFO20188.1| 63kd antigen [Loa loa]
          Length = 528

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/298 (19%), Positives = 101/298 (33%), Gaps = 21/298 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           +      V + GWVHR+R  G  ++F  +RD  G  QVV          A SV +E  + 
Sbjct: 99  IKHRNERVCVKGWVHRIRRQGKSLMFFVLRDGTGFLQVVLMDKLCQTYEALSVNTESTVE 158

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G+V                 EL A   +++  A    +      E         R L 
Sbjct: 159 IYGVVKEVPE----CKEAPNGHELIADFWKVIGNAPSGGIDNVLNEEAGVDKMLDNRHLV 214

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +R +     +  R     +MR       ++E + P L  +  EG           + S+ 
Sbjct: 215 IRGENAAALLRLRAATTRAMREHFYNAGYVEVAPPTLVQTQVEGGSTLFKFDYFGEPSY- 273

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L Q+ Q Y +  +      +  ++     E  R+ R   E+  ++ E  F+  DD++  
Sbjct: 274 -LTQSSQLYLETCIPPLAMSFALLSLTGVAEKSRTRRHLAEYAHVEAECPFITLDDLMMK 332

Query: 253 MENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +E ++    +                         FLR+ Y DAI+            
Sbjct: 333 IEELVCDTVDRLLADEEARKLLEHVNPKFEPPKRPFLRMQYKDAIKWLQEHNVQNEFG 390



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 13/116 (11%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAF 508
            +       F M +   ++     +        DL+  G  EI  G +R    + + +AF
Sbjct: 418 NRFPSEIKAFYMQRDAQDNTLTESV--------DLLMPGVGEIVGGSMRIWKFDELSKAF 469

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            N  I  +     +         G  PHGG   G++R +  L    ++R+V L+P 
Sbjct: 470 ENAEIDPKP----YYWYLDQCLFGACPHGGYGLGLERFICWLTNTYHIRDVCLYPR 521


>gi|240279869|gb|EER43374.1| lysyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 541

 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 61/285 (21%), Positives = 109/285 (38%), Gaps = 16/285 (5%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLV 77
           V + G +   R  G  +IFLD+  +    QV+ N           +  +  + L   G V
Sbjct: 112 VVIYGRIQSARIAGSKLIFLDLVQNGRKVQVLCNQRHLDGMGVTPEKFKQFYHLLRRGDV 171

Query: 78  MSRSAETINANIITGQIELSAQKIE--ILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            S        +    ++ ++A ++   I     ++PL +  +   P       R + L  
Sbjct: 172 FSVIGHPHRTSRR--ELSVAASQLPKLITPCLHDVPLRMKDQESSPYD-----RHVQLLS 224

Query: 136 -DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYA 193
             T    +  R+ II  +R   +  +F+E  TPIL + +    AR F   +        +
Sbjct: 225 SPTAADILRARSSIIQYIRSFFLDRSFMEVETPILASVAGGAVARPFQTSATEFPDRPLS 284

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ + + L+  GFD+ F+I P FR+E       P EF   +   +F + + ++   
Sbjct: 285 LRIAPELWLKRLVVGGFDKVFEIGPSFRNEGLDKTHNP-EFTTCEFYHAFADLETLITLT 343

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-PDLRNPI 297
           E+   G+     + N             A      D  PDL   +
Sbjct: 344 ESFFTGLDRHIRHLNETLETLSPTTTSFAAPFCRLDFIPDLETAM 388


>gi|261188258|ref|XP_002620545.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239593292|gb|EEQ75873.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 615

 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 74/439 (16%), Positives = 147/439 (33%), Gaps = 65/439 (14%)

Query: 4   YRTHSCGDLGVSDVGSF---------VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVAN 53
            R+ SC +                  V + G +   R  G  +IFLD+  +    Q++ N
Sbjct: 99  KRSISCDEFHSKYKDIKPNETAEQDLVVIYGRIQSTRIAGSKLIFLDLVQNGRKVQILCN 158

Query: 54  PDSACFE--IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEEL 110
                      +  +  + L   G V S   +        G++ ++A ++ ++++     
Sbjct: 159 QRHLDGTGVTPEKFKQFYHLLRRGDVFSAIGKPH--RTGRGELSVTASELPKLITPCLHD 216

Query: 111 PLPVFGEREYPESIRFKYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                 E+E        +R + L    T    +  R+ II  +R   + ++F+E  TPIL
Sbjct: 217 IPLRIKEQESSPY----HRHVQLLSSPTAADILRARSSIIQYIRTFFLDKSFMEVETPIL 272

Query: 170 TASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS- 227
            + +    AR F   +        +L  AP+ + + L+  GFD+ F+I   FR+E   S 
Sbjct: 273 ASVAGGAVARPFETSATEFPDRPLSLRIAPELWLKRLVVGGFDKVFEIGQSFRNEGKNSL 332

Query: 228 -------------------------------DRLPGEFYQLDMEMSFVEQDDILNTMENV 256
                                               EF   +   +F + + +++  E++
Sbjct: 333 PPYPGFFLPCNSREKQENNHLKLGVKSTGLDKTHNPEFTTCEFYHAFADLETLISLTESI 392

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-PDLRNPIIMHNVTEHFVHSEFRVFS 315
             G+ +   N N             A      D  PDL   +  H + +           
Sbjct: 393 FTGLSQHVHNLNQTLPTLSPTTASFAAPFSRLDFIPDLEAAM-GHKLPDFASTPTEEAAK 451

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPV 375
            IL +   +E    P           DR++            +I        +   + P+
Sbjct: 452 IILDL---FEQLHHPPPTNATLPRLLDRLSSIYLEPQCKNPTFII------NHPECLSPL 502

Query: 376 AK-HLNIVNTEAIRVRLDM 393
           +K  ++  N + +  R ++
Sbjct: 503 SKSFIHPANGQVVTARAEL 521



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 6/94 (6%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG------GLYRA 528
             +   + +L  +  E+ +     +      + F      +       G         +A
Sbjct: 512 GQVVTARAELFVDKREMVNMYEEENSPFEQRRKFEIQLGFQGQAVEEEGEGKMDESYVQA 571

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            Q G+PP GG   G+DR+VML  GA  + +V  F
Sbjct: 572 LQWGLPPTGGWGCGVDRLVMLFTGAGRIGDVLSF 605


>gi|213025126|ref|ZP_03339573.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 189

 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 9/187 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L  
Sbjct: 10  LEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL-- 67

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 68  -GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDL 123

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  K R++I+  +R  M+A  F+E  TP++        AR F+          
Sbjct: 124 ISNDESRNTFKTRSKILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDM 183

Query: 192 YALPQAP 198
           Y L  AP
Sbjct: 184 Y-LRIAP 189


>gi|325093000|gb|EGC46310.1| lysyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 567

 Score =  138 bits (348), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 61/285 (21%), Positives = 109/285 (38%), Gaps = 16/285 (5%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLV 77
           V + G +   R  G  +IFLD+  +    QV+ N           +  +  + L   G V
Sbjct: 112 VVIYGRIQSARIAGSKLIFLDLVQNGRKVQVLCNQRHLDGMGVTPEKFKQFYHLLRRGDV 171

Query: 78  MSRSAETINANIITGQIELSAQKIE--ILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
            S        +    ++ ++A ++   I     ++PL +  +   P       R + L  
Sbjct: 172 FSVIGHPHRTSRR--ELSVAASQLPKLITPCLHDVPLRMKDQESSPYD-----RHVQLLS 224

Query: 136 -DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYA 193
             T    +  R+ II  +R   +  +F+E  TPIL + +    AR F   +        +
Sbjct: 225 SPTAADILRARSSIIQYIRSFFLDRSFMEVETPILASVAGGAVARPFQTSATEFPDRPLS 284

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ + + L+  GFD+ F+I P FR+E       P EF   +   +F + + ++   
Sbjct: 285 LRIAPELWLKRLVVGGFDKVFEIGPSFRNEGLDKTHNP-EFTTCEFYHAFADLETLITLT 343

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK-PDLRNPI 297
           E+   G+     + N             A      D  PDL   +
Sbjct: 344 ESFFTGLDRHIRHLNETLETLSPTTTSFAAPFCRLDFIPDLETAM 388



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 4/92 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN---VGISKEVVENRFG-GLYRAFQ 530
               A + +L  +  E+ +     +      + F       +     E +      +A Q
Sbjct: 466 GQTVAARAELFIDQREVVNMYEEENSPFEQRRKFEIQLGFQVPAVEAEGKMDENYLQALQ 525

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            G+PP GG   G+DR+ ML  GAK + +V  F
Sbjct: 526 WGLPPTGGWGCGVDRLCMLFTGAKRIGDVLSF 557


>gi|282891418|ref|ZP_06299917.1| hypothetical protein pah_c161o033 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498703|gb|EFB41023.1| hypothetical protein pah_c161o033 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 602

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 59/286 (20%), Positives = 108/286 (37%), Gaps = 25/286 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V   V L GW++  RP G + FL +RD  G  Q+V   D   ++   +++   +L I G 
Sbjct: 13  VDQEVILRGWLNNTRPFGKLNFLILRDRSGFAQIVIQ-DKEVWKKINALQPGSILKIVGK 71

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V       +   I+  +I++     ++               +        +R + LR  
Sbjct: 72  VADAPQAELGVEIVDPKIDIEVPVTDV-----PPVDYYKPTIQSDLDYILDHRPIALRNR 126

Query: 137 TLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
            +      +  I ++ R  M      +E   P +  +S EG  +F         +  A  
Sbjct: 127 QIQAIFKIQAEITHAFRLFMHDVVRAVEYFAPNIIGASSEGGAEFFNVDYFGYTATLA-- 184

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTME 254
           Q+ Q YKQ +M    +R F + P FR E+ ++ R   E  Q + EM F E   ++++  E
Sbjct: 185 QSSQLYKQ-IMVGVNERVFALMPFFRAENSQTTRHLAEGKQFEFEMGFFENWHEVMDVQE 243

Query: 255 NVLRGVFEEFSNGNTVSNN--------------FLRICYDDAIRRY 286
             ++ +        T                  F R+ + +A   +
Sbjct: 244 GCIKAIMSHLEKHCTKEIEVLGKELIKAPADVAFPRVTFAEAQEIF 289



 Score = 97.1 bits (240), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 26/149 (17%)

Query: 422 QELGIINCNCF--EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
           +EL +     F  +  ++ D               +  PF       +    N       
Sbjct: 309 RELCLYAQEKFGTDLIFVTD------------WKRSKRPFYSYPKEDQPELTN------- 349

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
             +DL+C G EI SGG R H  E M++      +        F      F+ GMPPHGG 
Sbjct: 350 -TFDLLCAGTEITSGGQRRHTYESMVEGILEKEMDP----ANFEDYLSIFKYGMPPHGGF 404

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             G++RI M +L  KN+RE SLFP     
Sbjct: 405 GMGLERITMTILRLKNIRECSLFPSDPKR 433


>gi|331214131|ref|XP_003319747.1| asparaginyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309298737|gb|EFP75328.1| asparaginyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 577

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 120/326 (36%), Gaps = 62/326 (19%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG-L 76
              V   GW+  +R    + F+++ D      +         + ++ + +   + + G L
Sbjct: 129 NRLVTACGWIKTIRKQKNVSFVELIDGSTPHHLQVVV---GPKDSEELETGCAIRVTGNL 185

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           V+SR              EL A+ + ++     L  P+  +      +R +   L +R  
Sbjct: 186 VLSRGNGQSK--------ELKARSVNLVGPCLALEYPLQKKTHGAAFLR-RIPHLRVRTH 236

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL--------------- 181
                +  R+ +I      + A++F    TPI+T +  EGA +                 
Sbjct: 237 ETSALMRIRSTMIQEASSFLHAQHFFRSETPIITFNDCEGAGEVFSVRPDSQSKSSLQPP 296

Query: 182 ------VPSRV------NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
                 VP+        ++  F+   A      Q     +++   R +   P FR E  +
Sbjct: 297 ITISEKVPNSAPESAASHESRFFGREAFLTVSGQLHLEALSASLGRVYSFGPAFRAERSQ 356

Query: 227 SDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSN------------------G 267
           ++R   EF+ L+ E+SF+ + + ++  +EN+++ + +                       
Sbjct: 357 TNRHLAEFWMLEAELSFIEDLESLIVLLENLIKSIIQNLHQSDSLSSLDLQSLRAPKEPY 416

Query: 268 NTVSNNFLRICYDDAIRRYGTDKPDL 293
           N+ S ++ RI Y +A+    +   + 
Sbjct: 417 NSTSKSWPRITYTEAVELVQSHHEEH 442


>gi|296814996|ref|XP_002847835.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238840860|gb|EEQ30522.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 560

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 57/278 (20%), Positives = 103/278 (37%), Gaps = 28/278 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFEIAK---SVR 66
           L        V +   V   R     + FL + +    I  V++  +    ++ K    + 
Sbjct: 95  LSDDHYDKEVTIIARVDNARVQSAKLAFLMLRQQGKKIQAVISLKEPLSRQMIKWTGQLN 154

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
              ++ + G+V        +A++    +EL   K+ ++S A  +      + E P     
Sbjct: 155 VNSIVQVSGIVKKPEIPVHSASLPN--MELHITKVYMISEAIPMLPMQVKDAERPPPEST 212

Query: 123 --------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                           R   R LDL+ +T    +   + +       M+        T  
Sbjct: 213 EEGLVDTDGTLCQFETRLDNRILDLQTETSQAIMAISSGVAQLFSEYMLKSGSRWIFTSK 272

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           +T ++ EG       S   + ++  L Q+PQ  KQ+ +A      F+I P FR ED  + 
Sbjct: 273 ITGAATEGGSGVFEISYFKRKAY--LSQSPQLGKQMCIAGDMMSVFEIGPVFRAEDSNTH 330

Query: 229 RLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFS 265
           R   EF  LD E +F     ++L+  EN+L  +  E  
Sbjct: 331 RHLTEFIGLDFERTFQKHYHEVLDFAENLLVFILSELK 368


>gi|297284497|ref|XP_002802605.1| PREDICTED: lysyl-tRNA synthetase isoform 2 [Macaca mulatta]
          Length = 424

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 77/190 (40%), Gaps = 4/190 (2%)

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                   +  R++ R+LDL  +   +   + R++++  +R  +    F+E  TP++   
Sbjct: 85  HLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKMVTYIRSFLDELGFLEIETPMMNII 144

Query: 173 SPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                A+ F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P
Sbjct: 145 PGGAVAKPFITYHNELDMNLY-MRIAPELYHKILVVGGIDRVYEIGRQFRNEGIDLTHNP 203

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF   +  M++ +  D++   E ++  +  +    N       R   DD       + P
Sbjct: 204 -EFTTCEFYMAYADYHDVMEITEKMVSALGMKLPETNLFETEETRKILDDICVAKAVECP 262

Query: 292 DLRNPIIMHN 301
             R    + +
Sbjct: 263 PPRTTARLLD 272



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 306 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 365

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG   G+DR+ M L  + N++EV LFP  +
Sbjct: 366 YGLPPTGGFGMGLDRVAMFLTDSNNIKEVLLFPAMK 401


>gi|171679499|ref|XP_001904696.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939375|emb|CAP64603.1| unnamed protein product [Podospora anserina S mat+]
          Length = 542

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 111/280 (39%), Gaps = 32/280 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V + G+V  VR      F+ + D   +  + A  +S    +A+ +     + + G  ++ 
Sbjct: 73  VVVHGYVRSVRGLKAWRFVSLADGSSLDPLQAVIESG---LAEGLTVGAAVRLTGSWVAS 129

Query: 81  SAETINANIITGQIELSAQKIEILSVAEE----LPLPVFGEREYPESIRFKYRFLDLRRD 136
                         EL  +++++L  ++        P+  + + PE +R     L  R  
Sbjct: 130 PG-------AAQSHELQVREVKVLGSSDAKFALQTFPIQKKYQTPEYLRTL-PHLRPRTP 181

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-------- 188
                +  R+  + S+      ++F++   PI+T+S  EGA +    +  N         
Sbjct: 182 LNALLLRLRSEAVTSLTQFFARQDFVQTHPPIITSSDCEGAGEVFTLNPANDTAGQPGKE 241

Query: 189 -----GSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 SF+          Q     +A      + ++P FR E   + R   EFY L+ E
Sbjct: 242 SADSQDSFFRSKKYLTVSTQLHLEALAQSVGNVWTLSPVFRAEQSDTSRHLSEFYMLEAE 301

Query: 241 MSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           MSFV + + +++  E+++R +  +    +TV +   R  +
Sbjct: 302 MSFVDDMNSVMDLAEDMMRQLGTDLYQSDTVKSLLTRTPH 341



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 54/147 (36%), Gaps = 23/147 (15%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL-VCNGFEI 491
              ++ ++P        + I      F M           D   +    +DL V    EI
Sbjct: 409 RPVFVTNYP--------RDIKA----FYMRP--TRGPGSEDPSRVTVDCFDLLVPELCEI 454

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVE--------NRFGGLYRAFQCGMPPHGGIAAGI 543
           A G +R H  E +L   +  GI K   E        N         + G PPHGG   G 
Sbjct: 455 AGGSMREHQLEPLLDIMTRQGIIKSPSETASEDDSGNGLQWYADLRRWGCPPHGGFGLGF 514

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCD 570
           DR++  L G + VR++  FP     CD
Sbjct: 515 DRLLSYLSGVQTVRDIVSFPRWYGRCD 541


>gi|320590287|gb|EFX02730.1| asparaginyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 596

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 60/308 (19%), Positives = 107/308 (34%), Gaps = 27/308 (8%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFEIAKSVRSE 68
           G+      G+ VR+ G +HR+R      FL ++D YG +  V+A         A     E
Sbjct: 157 GEAAKGSKGTRVRVFGRIHRLRAQKQATFLTLKDGYGYLQCVLAAGPLTQTYEALLFAQE 216

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF-----GEREYPES 123
             L + G + +        +      EL     E+   A      +      G+++  E+
Sbjct: 217 TSLWVYGELRTVPEGATAPDGR----ELHVDFFEVFGRAPGDAEAITNIVATGQQDPWEA 272

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
                R L LR D     +  R+ +  S             S P    +  EG       
Sbjct: 273 DMLDKRHLVLRGDKASAVMKLRSILYESFVLAYRQRRIAAVSPPAFVQTQVEGGSTLFRV 332

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              ++ ++  L Q+ Q Y +  + S     + I   FR E   + R   E+  ++ E+  
Sbjct: 333 PYYSEDAY--LTQSSQLYLETCLPS-LGDVYCIEKSFRAEKSLTRRHLAEYTHIEAELDG 389

Query: 244 VEQDDILNTMENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTD 289
           +  +D+L  +E+++  V +                      +  F R+ Y DAI      
Sbjct: 390 IVFEDLLTHVEDMICAVVDAVLADPAGRELVQLLNPGFVKPARPFRRMRYADAIDWLNAQ 449

Query: 290 KPDLRNPI 297
            P + N  
Sbjct: 450 DPPVPNEF 457



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                   F M +     L+  + + +      L+    EI  G +R    E +L AF N
Sbjct: 487 HFPVEVKAFYMKK-DPADLRVTESVDV------LMPTVGEIVGGSMRMEGYEELLAAFKN 539

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            G++       +       + G  PHGG   G++R +  +     VR   L+P 
Sbjct: 540 KGLNP----EPYYWYLDQRKYGTSPHGGYGLGLERFLAWIANQHTVRTCCLYPR 589


>gi|294786597|ref|ZP_06751851.1| lysine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315226184|ref|ZP_07867972.1| lysine--tRNA ligase [Parascardovia denticolens DSM 10105]
 gi|294485430|gb|EFG33064.1| lysine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315120316|gb|EFT83448.1| lysine--tRNA ligase [Parascardovia denticolens DSM 10105]
          Length = 572

 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 107/248 (43%), Gaps = 14/248 (5%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIR--DHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           ++   FV L+G V  +R  GG+ F+ +   D   I  +V+  +      A S++    L 
Sbjct: 126 AETDDFVGLAGRVLFLRNGGGLCFVQLAAGDGTHIQGMVSKREVG----ADSLKLYKQLV 181

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +      I +   TG++ +   +  I S +      +   +E  E  R +  +L 
Sbjct: 182 DLGDHLFLHGRVIASK--TGELSIMVDQWRIASKSLRPLPAL--HKELNEEQRTRKPYLG 237

Query: 133 LRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           +  D   +++V+ R +++ S+R       F+E  TP+L  +     AR F         +
Sbjct: 238 MIVDQKSRDMVRNRAKVVASLRRNFDQRGFLEAETPMLQTNHGGATARPFETHMNAFDIN 297

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            + +  AP+ + + ++  G D+ F+I   FR+E       P EF  ++   ++   D + 
Sbjct: 298 LF-MRIAPELFLKRMLVGGIDKVFEINRDFRNEGADGTHAP-EFTMVEAYEAYGTYDTMA 355

Query: 251 NTMENVLR 258
              +++++
Sbjct: 356 KLTQSLVQ 363



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 68/204 (33%), Gaps = 31/204 (15%)

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E  ++   G +++ L    T    V       D       +             H+ +  
Sbjct: 388 EWKSITMYGSLSEKLGEEITPETSVEHLAALADKLGVEREEVENH----GKLVEHLWEHF 443

Query: 425 GIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
              +    +E  ++ DFP      E   +  +H                  +  +  ++D
Sbjct: 444 YTEDSRQLWEPTFVRDFPV-----ETSPLTKSHR----------------SIPGQVEKWD 482

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGI 539
           L   GFE+A+     +   V  Q F +             +       A   GMPP GG+
Sbjct: 483 LYVRGFELATAYSELNDPVVQRQRFVDQAKMALAGDSEAMDIDEDFLEALGVGMPPAGGM 542

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
             GIDR+++ L GA  +RE   FP
Sbjct: 543 GMGIDRLLIALTGA-TIRETITFP 565


>gi|156084320|ref|XP_001609643.1| lysyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796895|gb|EDO06075.1| lysyl-tRNA synthetase, putative [Babesia bovis]
          Length = 522

 Score =  138 bits (347), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 65/296 (21%), Positives = 113/296 (38%), Gaps = 19/296 (6%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           +RT +  +    + G    + G +  +R  G  +F+ I D  G    V         I  
Sbjct: 86  HRTLNNDE---ENEGVNYCIYGRIKAIRFGG--LFVVIEDKQGDELQVLFRRKMTIHIGD 140

Query: 64  S---VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
                 +   L   G V+            TG++ L    + IL+         F     
Sbjct: 141 KPFNAENIDQLIDIGDVIQVGGHVK--KTGTGELTLIPHHMSILAKCLLPMPDGF-HGLK 197

Query: 121 PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS-SPEGAR 178
             + R K R LD+  +   + I+  R+ II  +R  + ++ F+E  TPIL    S   A+
Sbjct: 198 DVATRHKLRHLDIMVNEDTRGILLQRSHIIWELRKLLHSKGFVEVETPILQHIYSGANAQ 257

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            F   S     + Y L  AP+ + + L+  G  D+ F+I  CFR+E   + R   EF  +
Sbjct: 258 PFKTRSEALDENLY-LRIAPEFFLKRLIVGGLGDKIFEIGKCFRNEGTSA-RHSPEFTMI 315

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           ++        D++N +E ++  + ++          F R      I  +     DL
Sbjct: 316 EIYQQMANAGDMINLLEEIIETLAKKIG---VEFPKFTRKTMVGLIEEHIGINVDL 368



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 46/122 (37%), Gaps = 5/122 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            ++   E+   +  H   T     +  L  +     K   ++    G EIA G       
Sbjct: 400 LFKCAVEDNITEPTH--VTELPSDISPLAAS--EGSKGKVFESYLQGLEIAHGCTEECNP 455

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
             +L      G+   +   R   L  A   GMPP  GI  GIDR+VM L    +++ +  
Sbjct: 456 VQLLHKLDMCGLQ-GLGHTRDTELLNAVAHGMPPTAGIGIGIDRLVMALSKTTSIKNIQT 514

Query: 562 FP 563
           FP
Sbjct: 515 FP 516


>gi|221053089|ref|XP_002257919.1| asparagine--tRNA ligase [Plasmodium knowlesi strain H]
 gi|193807751|emb|CAQ38456.1| asparagine--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 586

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 69/471 (14%), Positives = 138/471 (29%), Gaps = 108/471 (22%)

Query: 17  VGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDS--ACFEIAKSVRSEWVLC 72
           +   + + GW   VR  GG    F+++ D      +    D     +E            
Sbjct: 80  IDQIITVCGWSKAVRKQGGGRFCFVNLNDGSCHLNLQIIVDQSIQNYEKLLKCGVGCCFR 139

Query: 73  IDGLVMSRSAETINANIITGQ-IELS-----AQKIEILSVAEELPLPVFGEREYPESIRF 126
             G ++    +      +  + +ELS         EI     +       ++ +      
Sbjct: 140 FTGKLIVSPVQNEGEKGLIKENVELSLKDNSIHNFEIYGENLDPQKYPLSKKNHGREFLR 199

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           +   L  R   +   I  R  +  +      +  F+   TP++T S  EG  +    + +
Sbjct: 200 EVAHLRPRSYFISSVIRIRNALAIATHLFFQSRGFLYIHTPLITTSDCEGGGEMFTVTTL 259

Query: 187 N--QGSFYALPQA-------------------------------------PQQYK----- 202
                 + A+P+                                      P QY      
Sbjct: 260 LGEDADYSAIPRVKKLAKEGKKREDIQATHAADVGGDESRSGNAHESSAQPTQYLIDYKK 319

Query: 203 ------QLLMASG----------FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                   L  SG              +   P FR E+  + R   EF+ ++ E++F + 
Sbjct: 320 DFFSKQAFLTVSGQLSLENLCSSMGDVYTFGPTFRAENSHTSRHLAEFWMIEPEIAFADL 379

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNN---------------------FLRICYDDAIRR 285
            D +   E+ ++       + +                          F +I Y + I  
Sbjct: 380 YDNMELAESYIKYCIGYVLSNHFDDIYYFEKNVENGLISRLKNVLDEKFAKITYTNVIDL 439

Query: 286 YGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
                     P+   M   +EH      ++F K + V    +            +AF  +
Sbjct: 440 LLPYSEKFEVPVKWGMDLQSEHERFVAEQIFKKPVIVYNYPKDL----------KAFYMK 489

Query: 344 MNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
           +NE      Q  +A +   + + G V G      +L  ++   +  +L+M+
Sbjct: 490 LNE-----DQKTVAAMDVLVPKIGEVIGGSQREDNLERLDKMILEKKLNME 535



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    E+  G  R    E + +      ++       +    +  + G  PH G   G 
Sbjct: 503 LVPKIGEVIGGSQREDNLERLDKMILEKKLNM----ESYWWYRQLRKFGSHPHAGFGLGF 558

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R++ML+ G  N+++   FP 
Sbjct: 559 ERLIMLVTGVDNIKDTIPFPR 579


>gi|296231612|ref|XP_002761206.1| PREDICTED: lysyl-tRNA synthetase isoform 2 [Callithrix jacchus]
          Length = 424

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 77/190 (40%), Gaps = 4/190 (2%)

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                   +  R++ R+LDL  +   +   + R++II  +R  M    F+E  TP++   
Sbjct: 85  HLHFGLKDKETRYRQRYLDLILNDFVRQKFITRSKIITYIRSFMDELGFLEIETPMMNII 144

Query: 173 SPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                A+ F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P
Sbjct: 145 PGGAVAKPFITYHNELDMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP 203

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            EF   +  M++ +  D++   E ++  +  +    N       R   DD       + P
Sbjct: 204 -EFTTCEFYMAYADYHDLMEITEKMVSALGMKLPETNLFETEETRKILDDICVAKAVECP 262

Query: 292 DLRNPIIMHN 301
             R    + +
Sbjct: 263 PPRTTARLLD 272



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 4/108 (3%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 306 KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 365

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
            G+PP  G   GIDR+ M L  + N++EV LFP  +        +P+ 
Sbjct: 366 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMKPEDKKENVAPTE 413


>gi|303322843|ref|XP_003071413.1| lysyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240111115|gb|EER29268.1| lysyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320032821|gb|EFW14771.1| lysyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 574

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 68/304 (22%), Positives = 119/304 (39%), Gaps = 27/304 (8%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIA--KSVRSEWVLCIDGLV 77
           V L G +   R  G  ++F D+       Q++ N           +  R  + L   G V
Sbjct: 114 VSLYGRIRSQRTAGSKLVFFDLWQDGHKVQILCNQRILGITGVSPERFREFYHLLQRGDV 173

Query: 78  MSRSAETINANIITGQIELSAQKI-EILSVA-EELPLPVFGEREYPESIRFKYRFLD-LR 134
            S + +        G++ L A ++  +LS    ++P+        P       R +  L 
Sbjct: 174 YSITGKPH--RTGRGELTLLASELPNLLSPCLHDVPVDTKEHAVSPYE-----RHVQFLA 226

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-RDFLVPSRVNQGSFYA 193
              +   +  R+ I+  +R   +   FIE +TPI+ A++     R F   +  +     A
Sbjct: 227 DPGVADILRARSSIVQHIRNFFLERRFIEVNTPIIAAAAGGAIARPFHTTASESIEQLLA 286

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ + + L+  GFDR F+I P FR+E       P EF   +   +F + + ++   
Sbjct: 287 LRIAPELWLKRLIVGGFDRIFEIGPSFRNEGLDKTHNP-EFTTCEFYQAFADLECLMQMT 345

Query: 254 ENVLRGVFEEFSNGN-----------TVSNNFLRICYDDAIRRY-GTDKPDLRNPIIMHN 301
           E +L G+ +     N             S  F RI +  A+    G   PDL++      
Sbjct: 346 ETLLSGLSQNIRELNEKLGTLHPIYVDFSTPFRRIDFVPALESAMGHTLPDLKSDGATVK 405

Query: 302 VTEH 305
           + E 
Sbjct: 406 MVEL 409



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV----- 511
           +P  M       +       + A   +L   G E+ +     +      + F        
Sbjct: 448 HPECMSPLSKSYIHPTCSQVVSARA-ELFVEGKEVVNTYEEENSPFEQRRKFQEQLSYRD 506

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             +   ++       +A + G+PP GG   GIDR+ ML  G + + +V  F
Sbjct: 507 PENPGELDES---YLQALEWGLPPTGGWGCGIDRLCMLFTGVRRIGDVLSF 554


>gi|115386114|ref|XP_001209598.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114190596|gb|EAU32296.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 559

 Score =  137 bits (346), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 61/298 (20%), Positives = 106/298 (35%), Gaps = 30/298 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYG-ITQVVANPDSACFEIAK---SV 65
           D+        + +   V   R     + FL +R     I  V+A  +    ++ K    +
Sbjct: 91  DINDDLYEKEITVVARVDNARVQSAKLAFLMLRQQGAKIQCVIALAEPISRQMIKYTGGL 150

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE--- 122
               ++ + G+V        +A +     E+  +K+ ++S A +       + E P    
Sbjct: 151 NVNSIVQVTGVVKKPQTPIASATLSN--HEIHIRKVYMISEAAQQLPMQVKDAERPPPET 208

Query: 123 -----------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
                              R   R LDL+ +T        + +       MI        
Sbjct: 209 TEEGFQTDADGAPIVTLKTRLDNRVLDLQTETSQAITWISSGVAELFAEYMIKSGSRWIF 268

Query: 166 TPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           TP L  ++ EG           +  + A  Q+PQ YKQ+ +A   +  F+IAP FR ED 
Sbjct: 269 TPKLVGAATEGGSGVFEVKYFKRNGYLA--QSPQLYKQMCIAGDMESVFEIAPVFRAEDS 326

Query: 226 RSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
            + R   EF  LD E +F     ++L   EN+L  +  +           ++  Y  A
Sbjct: 327 NTHRHLTEFSGLDFEKTFHAHYHEVLEFAENLLVFILTQLKERYADKIAIIQKSYPKA 384



 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 72/188 (38%), Gaps = 25/188 (13%)

Query: 384 TEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-F 440
            +   +RL+  DG      AG D  +   F  D    + ++LG I    ++  + ++D F
Sbjct: 391 KDGKALRLNYMDGVQMLKEAGVDVSEQERFENDFTTAMEKQLGQIIREKYDTDFYVLDKF 450

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P             A  PF             D     +  YD    G EI SG  R + 
Sbjct: 451 PM------------AVRPFYTKAC------PQDPR--FSNSYDFFMRGEEIMSGAQRIND 490

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            + +  +    G+     +  F     AF+ G PPH G   G++RIVM  LG  NVR  +
Sbjct: 491 IKELEASMRAKGVEPN--QEGFEDYLNAFRQGCPPHAGGGLGLNRIVMFFLGLPNVRLAT 548

Query: 561 LFPMSQNF 568
           LFP     
Sbjct: 549 LFPRDPQR 556


>gi|312218276|emb|CBX98222.1| hypothetical protein [Leptosphaeria maculans]
          Length = 1039

 Score =  137 bits (346), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 53/269 (19%), Positives = 100/269 (37%), Gaps = 38/269 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  + ++G+V  VR    I F  I D   +  V A       ++A+ + +   + + G  
Sbjct: 67  GQPLTINGFVRSVRKQKRIAFAVIGDGSTLQTVQA---VLPPQLAEGLSNGAAVAVTGTW 123

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                +  +        EL    + +L   +                      L  R   
Sbjct: 124 APSLGKGQSH-------ELQVDHVRLLGENDAAKYQTA-------EFLRTLPHLRSRLPF 169

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP------------SR 185
               +  R+ +   +       +F++C TPI+T+S  EGA +                + 
Sbjct: 170 NSLILRLRSLVTAHVTSYFAKHDFVQCHTPIITSSDCEGAGEVFTVAPEVPSPATPEATS 229

Query: 186 VNQGS-----FYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            NQ       F+  P+      Q     +A   ++ + ++P FR E   + R   EFY L
Sbjct: 230 TNQMKQREDLFFGSPKYLTVSGQLHLEALAQSVNKVWTLSPAFRAEKSDTARHLSEFYML 289

Query: 238 DMEMSFVEQ-DDILNTMENVLRGVFEEFS 265
           + E++FV+  + I++ +E++LR V  E  
Sbjct: 290 EAELAFVDDVNQIMDVVEDMLRSVTSEVK 318



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 52/160 (32%), Gaps = 30/160 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG-FEIA 492
             ++ D+P                PF M        +     ++    +DL+     E+ 
Sbjct: 408 PVFVTDYP------------RNIKPFYMAPSTSMQTEAQAATTVAC--FDLLVPEICELV 453

Query: 493 SGGIRNHMSEVMLQAFSNVGIS---------KEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
            G +R H    +LQA    G+          +   E+         + G  PHGG   G 
Sbjct: 454 GGSMREHRLHELLQAMKEHGLQGAEGAADGDEAATEDALQWYVDLRRYGSVPHGGFGLGF 513

Query: 544 DRIVMLLLGAKNVREVSLFPMS------QNFCDLLMGSPS 577
           DR++  L G  N+R+      +          + L  +P 
Sbjct: 514 DRLLCYLSGVSNIRDCLSLQRNVPSLLRFRALEPLWRAPE 553


>gi|238060362|ref|ZP_04605071.1| aspartyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237882173|gb|EEP71001.1| aspartyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 428

 Score =  137 bits (346), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 77/343 (22%), Positives = 127/343 (37%), Gaps = 30/343 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            + VG+ VR++GWVHR R    + FL +RD  G+ QVVA   +A   + +          
Sbjct: 10  PAHVGATVRIAGWVHRRRLLKSVAFLIVRDAAGLAQVVATDPAARAAVEELTEET----- 64

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL--PLPVFGEREYPESIRFKYRFL 131
             +V   +    N    TG +EL    +  L                      +  +  +
Sbjct: 65  --VVEVTATVVANPAAPTG-VELIHPTVRPLGPPAAAPPFDLYRPALTATLPTQLDHAPV 121

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR       +      +   R  + A +F+E  TP + ASS E   +        + ++
Sbjct: 122 ALRHPLRSAALRVSAAAVAGFRATLDARHFVEIHTPKVVASSTESGANVFALDWFGRPAY 181

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDIL 250
            A  Q+PQ YKQ LM   F+R +++ P FR E   + R   ++  LD E+ FV +  D++
Sbjct: 182 LA--QSPQFYKQ-LMVGVFERVYEVGPVFRAEPHDTARHLAQYTSLDAELGFVGDHTDVM 238

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFL--------------RICYDDAIRRYGTDKPDLRNP 296
             + + L G+    ++    +   L              R     AI     D+PDL   
Sbjct: 239 VVLRDTLAGMLATVADRAGAALATLGVTVPPVPARIPAVRFTEALAIAGAPADEPDLAPA 298

Query: 297 II--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGN 337
               +         SEF   +        +     PA+    N
Sbjct: 299 HERALGEWARREHGSEFVFVTGYPMAKRPFYTHPDPARPAYSN 341



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/167 (28%), Positives = 66/167 (39%), Gaps = 26/167 (15%)

Query: 399 CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP 458
              IAG P      A      + +       +  EF ++  +P             A  P
Sbjct: 282 ALAIAGAPADEPDLAPAHERALGE--WARREHGSEFVFVTGYPM------------AKRP 327

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F                   +  +DL+  G E+ +GG R H  +  L A +  G   E V
Sbjct: 328 FYTHPD--------PARPAYSNGFDLLFGGLELVTGGQRLHRYDDYLAALAARGEPVEPV 379

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
                G   AF+ GMPPHGG A G++R V  L+GA NVREV+ FP  
Sbjct: 380 ----AGYVDAFRHGMPPHGGFAIGLERFVARLVGAANVREVTAFPRD 422


>gi|212543017|ref|XP_002151663.1| aspartyl-tRNA synthetase Dps1, putative [Penicillium marneffei ATCC
           18224]
 gi|210066570|gb|EEA20663.1| aspartyl-tRNA synthetase Dps1, putative [Penicillium marneffei ATCC
           18224]
          Length = 567

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 61/301 (20%), Positives = 109/301 (36%), Gaps = 34/301 (11%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRD-HYGITQVVANP-----DSACFEIAKS 64
           LG       V +   V   R     + FL +R     +  V+A P          +    
Sbjct: 96  LGEEHYEKEVTVVARVDNTRSQSAKLGFLMLRQKGKKLQTVIAAPAEGPVSRQMVKWTTG 155

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +    ++ + G V  + A  I +  +T ++EL   KI +++ A ++      + E P  +
Sbjct: 156 LNVNSIVQVTG-VAKKPAVPIASATLT-ELELQITKIYMIAEAAQVLPMQVKDAERPPPL 213

Query: 125 ----------------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFI 162
                                 R   R LDL+ +T        + +       M+     
Sbjct: 214 TDGIEGEPELDAEGTPIVTLKTRLDNRVLDLQTETSQAITWISSGVAQLFTEFMLKSGAR 273

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
              +  L+ SS EG  +       N+  + A  Q+PQ  KQ+ +A   +  F++ P FR 
Sbjct: 274 WIFSSKLSGSSTEGGSEVFEVKYFNKKGYLA--QSPQLMKQMAIAGDMESVFEVGPVFRA 331

Query: 223 EDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
           E+  + R   EF  LD E +F     ++L+  E +L  +  E           ++  Y  
Sbjct: 332 ENSNTHRHLTEFTGLDFEKTFRHHYHEVLDFAEELLVFILTELKERYKDEIAVIQKSYPK 391

Query: 282 A 282
           A
Sbjct: 392 A 392



 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 25/188 (13%)

Query: 384 TEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-F 440
            +   +RL+  DG +    AG D  +  +F  D    + ++LG I    ++  + ++D F
Sbjct: 399 KDGKALRLNYMDGVALLKEAGVDTSEQEAFENDFTTAMEKKLGQIIREKYDTDFYVLDRF 458

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P             A  PF          K +      +  YD    G EI SG  R + 
Sbjct: 459 PM------------AVRPFYT--------KADPEDPTFSHSYDFFMRGEEIMSGAQRIND 498

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            + + ++    G+  +     F     AF+ G PPH G   G++RIVM  LG  NVR  +
Sbjct: 499 VKELEESMIKKGVDPKT--EGFEDYLNAFRQGCPPHAGGGLGLNRIVMFFLGLPNVRLAT 556

Query: 561 LFPMSQNF 568
           LFP     
Sbjct: 557 LFPRDPQR 564


>gi|194882351|ref|XP_001975275.1| GG20650 [Drosophila erecta]
 gi|190658462|gb|EDV55675.1| GG20650 [Drosophila erecta]
          Length = 460

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 62/324 (19%), Positives = 117/324 (36%), Gaps = 54/324 (16%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  + + GW+  VR      FLDI D     +             + +    V+   G +
Sbjct: 24  GDSLAIQGWIKNVRRLKNNTFLDINDGSSSCRFQVVVPRTPEN--QHLSPGSVIAAVGKI 81

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRRD 136
                         G  EL A ++E+L+    +   P   ++++P     ++  L  R D
Sbjct: 82  QVAP---------NGSFELHANQVEMLAEGRLQEGYPFSPKQKHPPEYVREHLHLRSRVD 132

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP------------- 183
            +   +  R +   ++   M  +NF++ +TP+LT +  EGA +                 
Sbjct: 133 FVAAQMRVRHKAQKAIHDYMDEQNFVQINTPLLTTNDCEGAGEVFRVQPDSENLLKQMNR 192

Query: 184 -------SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                  S  +   F        Q     M  G    + ++P FR E+ +S     EFY 
Sbjct: 193 PNIPVEQSYFDGKVFL---TVSGQLHLEAMTYGLGNTYTLSPAFRAENSKSPLHLAEFYM 249

Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVFEE------------------FSNGNTVSNNFLRI 277
            + E++ +E+ + +   +E +L+ V                      S+   +   +  I
Sbjct: 250 FEAELAHLEELEKLAKFIEQMLKSVTNRLLETSAEDLSFCQKNSSSVSDLPWLQVPWTII 309

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHN 301
            YDDA++    +K  L+ PI +  
Sbjct: 310 SYDDALQVLQENKDSLKTPISLTE 333



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 54/149 (36%), Gaps = 30/149 (20%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           QEL ++  +C    +I+D+P                PF M       +   +   + A  
Sbjct: 339 QELFLV-AHCGAPVFIVDWP------------AEQKPFYMK------VSRTNPNRVHAL- 378

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+     E+  G +R     ++         S   +           + G  P GG  
Sbjct: 379 -DLLMPAVGELCGGSLRECDPSILR--------SHPQLPKDLEWYVDLRKYGGIPTGGFG 429

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G +R + L+ G KN+R+V  FP   + C
Sbjct: 430 MGFERYLQLVTGVKNIRDVIPFPRYPHSC 458


>gi|255934216|ref|XP_002558389.1| Pc12g15910 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583008|emb|CAP81218.1| Pc12g15910 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 534

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 103/264 (39%), Gaps = 26/264 (9%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              V+++G++  VR      F +I D   +  + A    A    A  + +   + I G+ 
Sbjct: 46  DQEVKVNGFIRSVRKQKRFAFAEISDGSTVEPLQAILKPA---QAADLSTGTAIEISGIW 102

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +        +      EL    ++++  ++    P+  +   P+ +R +   L +R   
Sbjct: 103 KACPPGKEQTH------ELQTSDVKVVGASDAETFPIQKKYHSPDFLR-QIPHLRIRTPF 155

Query: 138 LHKNIVKRTRIINSMRCRMIAEN---FIECSTPILTASSPEGARDFLVPS-------RVN 187
                  R+  +  +     +     F +   P++T+S  EGA +    +          
Sbjct: 156 NSLLSRFRSECMFQLGNVFHSHPDGAFTQVQPPLITSSDCEGAGETFTLTPRGAATPTTE 215

Query: 188 QGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              F+  P+    + Q + +   A+     + + P FR E   + R   EFY L+ E++F
Sbjct: 216 NEHFFRAPKYLTVSSQLHLE-AYAAELGNVWTLTPVFRAEKSDTPRHLSEFYMLEAEVNF 274

Query: 244 V-EQDDILNTMENVLRGVFEEFSN 266
           + + D + + +E++LR +     N
Sbjct: 275 MSDLDSLTDLVEHLLRDLTRRLYN 298



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 49/160 (30%), Gaps = 37/160 (23%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             ++ D+P             +  PF M              ++    +DL+     E+A
Sbjct: 388 PVFVTDYP------------KSVKPFYMAPSQTADGSNTPGETVAC--FDLLLPEVSEVA 433

Query: 493 SGGIRNHMSEVMLQAFSNV----------------------GISKEVVENRFGGLYRAFQ 530
            G +R H    ++Q                            ++ +   +         +
Sbjct: 434 GGSLREHRLLNLIQNMREHGLIKPRQIPESGDPASGESLYPHLTPDEDLSHLQWYADLRR 493

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G  PHGG   G DR +  L G  +VR++  FP      D
Sbjct: 494 WGSAPHGGFGLGFDRFLGYLTGVSSVRDIVSFPRYFGRAD 533


>gi|297519739|ref|ZP_06938125.1| lysyl-tRNA synthetase [Escherichia coli OP50]
          Length = 173

 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 9/180 (5%)

Query: 41  IRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQK 100
           ++D  G  Q+    D     +      +W L   G ++    +       TG++ +   +
Sbjct: 1   MQDVGGRIQLYVARDDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTE 55

Query: 101 IEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAE 159
           + +L+ A   PLP        +  R++ R+LDL  +   +N  K R++I++ +R  M+  
Sbjct: 56  LRLLTKALR-PLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNR 114

Query: 160 NFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
            F+E  TP++        AR F+          Y L  AP+ Y + L+  GF+R F+I  
Sbjct: 115 GFMEVETPMMQVIPGGAAARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINR 173


>gi|219109777|ref|XP_002176642.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411177|gb|EEC51105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 501

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 60/392 (15%), Positives = 114/392 (29%), Gaps = 79/392 (20%)

Query: 3   RYRTHSC--GDLGVSD----VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPD 55
            YR H     ++  +D    V   + ++GW   VR  G  ++F+++ D    T +     
Sbjct: 1   MYRRHRIRIKEILKADATACVDQTITVAGWARTVRKQGAKLMFVELNDGSVGTSLQCVLH 60

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL----- 110
               E              G       + + +      +EL     ++L           
Sbjct: 61  EPTCE---GFDGCKTNGGTGASFQFVGKVVQSQGEGQLVELQVSSAKLLGAVYAGNIEGT 117

Query: 111 ----PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                L    +++       +   L  R       +  R  +  +         F+   T
Sbjct: 118 EIGGMLYPMPKKDLTLEHMREQAHLRPRGAIHAAAMRIRHCMAYATHNFFHNHGFLYIHT 177

Query: 167 PILTASSPEGARDFLVPSRVN-----------------------------QGSFYALP-- 195
           PI+T +  EGA +    + +                                 F+     
Sbjct: 178 PIVTGADCEGAGEQFGITTLLGSDHHQKDIALPVDPNKPIEETVIGAVDYSTDFFGQRVN 237

Query: 196 -QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
                Q      A      +   P FR E+  + R   EF+ ++ E++F +  D +N  E
Sbjct: 238 LTVSGQLNVETHACALSDVYTFGPTFRAENSFTSRHLSEFWMIEPEIAFADLTDDINLAE 297

Query: 255 NVLRGVFE----------EFSNGNTVSNN-------------FLRICYDDAIRRYGTDKP 291
           + L+   E          EF   N                  F R+ Y +AI        
Sbjct: 298 DYLKYCVEYALENCADDLEFFENNPYGEMGLRDRLRNVIANPFKRLTYTEAIEILQNAVA 357

Query: 292 D----LRNPIIMHNV-TEHFVHSEFRVFSKIL 318
           +       P+   ++ +EH      +VF + +
Sbjct: 358 EGHKFEETPVWGMDLPSEHERFICEKVFQQPV 389



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 63/205 (30%), Gaps = 22/205 (10%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII---------- 427
           +L     +           D   F   +P          RN IA     +          
Sbjct: 294 NLAEDYLKYCVEYALENCADDLEFFENNPYGEMGLRDRLRNVIANPFKRLTYTEAIEILQ 353

Query: 428 ----NCNCFE--FCWIMDFPFY-EWNEEEKKIDFAHNPFTMPQGGME-SLKGNDLLSIKA 479
                 + FE    W MD P   E    EK           P+      +K ND     A
Sbjct: 354 NAVAEGHKFEETPVWGMDLPSEHERFICEKVFQQPVVLTDYPKDIKAFYMKLNDDGKTVA 413

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
               LV    EI  G  R H  +V+ Q    + +    V           + G  PH G 
Sbjct: 414 AADVLVPKIGEIIGGSQREHRMDVLKQRCLEMNLDPRSVW----WYLDLRRYGTVPHAGF 469

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPM 564
             G +R+++ + G  N+R+V  FP 
Sbjct: 470 GLGFERLILFITGLSNIRDVIPFPR 494


>gi|255018292|ref|ZP_05290418.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 232

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 72/181 (39%), Gaps = 9/181 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +    V ++G +   R  G + F  I+D +   Q+    D+   +     +   +  I
Sbjct: 56  LEEAAIEVSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKLADLGDI 115

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+      +       TG++ + A +  +LS +   PLP           R++ R+LDL
Sbjct: 116 IGI------KGTIFRTNTGELSVKATEFTLLSKSLR-PLPDKYHGLKDVEQRYRQRYLDL 168

Query: 134 RRDTL-HKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF 191
             +       V R++I+   R  M  + F+E  TP+L T +    A+ F+          
Sbjct: 169 ITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMEL 228

Query: 192 Y 192
           Y
Sbjct: 229 Y 229


>gi|68469168|ref|XP_721371.1| hypothetical protein CaO19.6533 [Candida albicans SC5314]
 gi|68470193|ref|XP_720858.1| hypothetical protein CaO19.13886 [Candida albicans SC5314]
 gi|77022726|ref|XP_888807.1| hypothetical protein CaO19_6533 [Candida albicans SC5314]
 gi|46442748|gb|EAL02035.1| hypothetical protein CaO19.13886 [Candida albicans SC5314]
 gi|46443286|gb|EAL02569.1| hypothetical protein CaO19.6533 [Candida albicans SC5314]
 gi|76573620|dbj|BAE44704.1| hypothetical protein [Candida albicans]
          Length = 535

 Score =  137 bits (345), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 100/258 (38%), Gaps = 14/258 (5%)

Query: 23  LSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           L G +  +R  G  + F+DI       Q++A       +            I   +  R 
Sbjct: 102 LEGRITSIRKSGKAMYFIDIVQDDCSVQIMATNKLMGMDPTAFNDCHSFFKIGDYIAVRG 161

Query: 82  AETINANIITGQIELSAQK-IEILSVAEELPLPVFGEREYPESIRFKYRFL-DLRRDTLH 139
                +   TG++ L   K IE+L+            R     +    R L  L      
Sbjct: 162 ---YASRTKTGELTLKLNKQIEMLTPVLSKMP----NRLEDRGLINNNRVLNYLVNRDSK 214

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             I+ ++++I ++R  ++  +F+E  TPIL+           V     +G    L  AP+
Sbjct: 215 DAIIVKSKVIQAIRNFLLDRDFLEVQTPILSGQGTGANATPFVTK--FKGEPVHLRVAPE 272

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + L+  GFD+ F+I   FR+E       P EF   +   ++   D+++   E++   
Sbjct: 273 LWLKKLVIGGFDKVFEIGSNFRNEGIDMTHNP-EFATCEFYQAYTSLDELMKMTEDMFGY 331

Query: 260 VFEEFS-NGNTVSNNFLR 276
           VF++        + NF +
Sbjct: 332 VFDKLGVTDKFPTGNFPK 349



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 9/113 (7%)

Query: 459 FTMPQGGMESLKGNDLLSI----KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
           F   Q  + S     +        + +++L  N  E+A+     +     L+ F      
Sbjct: 414 FIYNQPEIMSPLAKSITDAAGNRISSRFELFINAREMANAYEEENDPCKQLEKFKLQQKM 473

Query: 515 KEVVENR-----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           K    ++           A + G+PP GG   GIDR+ ML+ GA  + +V  F
Sbjct: 474 KADYNDQEMLIPDHNYVWAMEYGLPPTGGWGCGIDRLAMLIAGANRIEDVLTF 526


>gi|238883346|gb|EEQ46984.1| hypothetical protein CAWG_05538 [Candida albicans WO-1]
          Length = 535

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 100/258 (38%), Gaps = 14/258 (5%)

Query: 23  LSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           L G +  +R  G  + F+DI       Q++A       +            I   +  R 
Sbjct: 102 LEGRITSIRKSGKAMYFIDIVQDDCSVQIMATNKLMGMDPTAFNDCHSFFKIGDYIAVRG 161

Query: 82  AETINANIITGQIELSAQK-IEILSVAEELPLPVFGEREYPESIRFKYRFL-DLRRDTLH 139
                +   TG++ L   K IE+L+            R     +    R L  L      
Sbjct: 162 ---YASRTKTGELTLKLNKQIEMLTPVLSKMP----NRLEDRGLINNNRVLNYLVNRDSK 214

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             I+ ++++I ++R  ++  +F+E  TPIL+           V     +G    L  AP+
Sbjct: 215 DAIIVKSKVIQAIRNFLLDRDFLEVQTPILSGQGTGANATPFVTK--FKGEPVHLRVAPE 272

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + L+  GFD+ F+I   FR+E       P EF   +   ++   D+++   E++   
Sbjct: 273 LWLKKLVIGGFDKVFEIGSNFRNEGIDMTHNP-EFATCEFYQAYTSLDELMKMTEDMFGY 331

Query: 260 VFEEFS-NGNTVSNNFLR 276
           VF++        + NF +
Sbjct: 332 VFDKLGVTDKFPTGNFPK 349



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 9/113 (7%)

Query: 459 FTMPQGGMESLKGNDLLSI----KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
           F   Q  + S     +        + +++L  N  E+A+     +     L+ F      
Sbjct: 414 FIYNQPEIMSPLAKSITDAAGNRISSRFELFINAREMANAYEEENDPCKQLEKFKLQQKM 473

Query: 515 KEVVENR-----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           K    ++          RA + G+PP GG   GIDR+ ML+ GA  + +V  F
Sbjct: 474 KADYNDQEMLIPDHNYVRAMEYGLPPTGGWGCGIDRLAMLIAGANRIEDVLTF 526


>gi|195429240|ref|XP_002062671.1| GK19574 [Drosophila willistoni]
 gi|194158756|gb|EDW73657.1| GK19574 [Drosophila willistoni]
          Length = 459

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 63/349 (18%), Positives = 113/349 (32%), Gaps = 38/349 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
              +G +  G    + GW+  +R     IFLDI D            S  F+I     S 
Sbjct: 14  IAHVGKAQTGDSFSVKGWIKNIRRLKNNIFLDINDGST---------SGRFQIVLPRDSH 64

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFK 127
                 G V+S   +   A    G  EL A  +E L+  + +   P   ++++P     +
Sbjct: 65  TQKLTSGTVVSAQGKIQVA--PNGHYELHADAVESLADGQLQDGFPFSPKQKHPPEYVRE 122

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP---- 183
           +  L  R D     +  R +    +   M    F++ +TP+LT +  EGA +        
Sbjct: 123 HLHLRSRIDYFAAQMRLRHKAQKIIHDYMDELEFVQINTPLLTTNDCEGAGEVFRVQPDS 182

Query: 184 ----------------SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
                           S  +   F        Q     M+ G    + +AP FR E+ +S
Sbjct: 183 EDLLKQMSRPNVPLDQSYFDHKVFL---TVSGQLHLEAMSYGLGNTYTMAPAFRAENSKS 239

Query: 228 DRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD--DAIR 284
                EFY  + E+  ++  +++   +E +L+         +     F +   D    + 
Sbjct: 240 PLHLAEFYMFEAELVHLKHLEELSGFIEKMLKTTTNRLIETSGQDLQFCQASADAKQDLP 299

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
                 P L     +  + +H       +                  K 
Sbjct: 300 WLSVPWPVLTYDEALDTLIKHKESFTTPISQNEGFTKEQELFLVAHCKA 348



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 53/149 (35%), Gaps = 30/149 (20%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           QEL ++  +C    +++D+P                PF M          ++   + A  
Sbjct: 338 QELFLV-AHCKAPIFVIDWP------------VQQKPFYMKVSE------SNPQRVHAL- 377

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+     E+  G +R            +   S   +           + G  P GG  
Sbjct: 378 -DLLMPTVGELCGGSLREDD--------VSRLSSHPQLPKDLAWYVELRKFGGVPTGGFG 428

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G +R + LL G KN+R+V  FP   + C
Sbjct: 429 MGFERYLQLLTGVKNIRDVIPFPRYPHSC 457


>gi|292558064|gb|ADE31065.1| Asparaginyl-tRNA synthetase [Streptococcus suis GZ1]
          Length = 367

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 81/218 (37%), Gaps = 6/218 (2%)

Query: 93  QIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSM 152
             EL    +E++  +++ P+     +E+        R L LR          R  II + 
Sbjct: 14  GYELDVTDLEVIGESQDYPITP---KEHGTDFLMDNRHLWLRSRKQVAIQQIRNAIIYAT 70

Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
                   FI+  +PIL+ ++ E + +         G    L Q+ Q Y +   A    R
Sbjct: 71  YEFFEKNGFIKFDSPILSGNAAEDSTELFETDYF--GQLAYLSQSGQLYLE-AGAMALGR 127

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN 272
            F   P FR E  ++ R   EF+ +D E SF+  ++ L+  E  ++ + +   +    + 
Sbjct: 128 VFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLSHEESLDLQEAYVKALIQGVIDRAPQAL 187

Query: 273 NFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
             L    D   R        +     +  + EH    +
Sbjct: 188 ETLERDVDALKRYIAEPFKRVAYDDAITLLQEHEADKD 225



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 22/136 (16%)

Query: 435 CWIMDF---PFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGF 489
            WI ++   P +  N        +   F M    G  E +   DLL+ + +         
Sbjct: 243 TWISNYFGVPTFVVN-----YPASFKAFYMKPVPGNPERVLCADLLAPEGYG-------- 289

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ K   E          + G  PHGG   GI+R+V  
Sbjct: 290 EIIGGSMREDNYDALVAKMDELGMDKSEYE----FYLDLRKYGSVPHGGFGIGIERMVTF 345

Query: 550 LLGAKNVREVSLFPMS 565
           + G K++RE   FP  
Sbjct: 346 VAGTKHIREAIPFPRM 361


>gi|326330922|ref|ZP_08197222.1| aspartyl-tRNA synthetase [Nocardioidaceae bacterium Broad-1]
 gi|325951280|gb|EGD43320.1| aspartyl-tRNA synthetase [Nocardioidaceae bacterium Broad-1]
          Length = 455

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 100/261 (38%), Gaps = 18/261 (6%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L  +  G+ VRL G VHR R    + FL +RD  G+ QVV  P        + 
Sbjct: 6   RT-LAARLTAATPGTTVRLCGHVHRRRELATVTFLVLRDRSGLAQVVVRPGDGQQAPTEE 64

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPE 122
                       V      T N     G +E+++  +  LS             E     
Sbjct: 65  ----------TPVEVIGVATPNPQ-APGGVEVTSPAVTTLSEPALTSPVELWRPELAAAL 113

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
                +  +  R   +          +   R  + A  F E  +P +  S+ E   +   
Sbjct: 114 PTLLDHAPVTWRHPAVRARWELAAASLRGFRATLDAAGFTEVHSPKIVDSATESGANVFE 173

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                + ++ A  Q+PQ YKQ L A  F+R +++ P FR E   + R   E+  LD+E+ 
Sbjct: 174 IDYFGRPAYLA--QSPQFYKQQL-AGVFERVYEVGPVFRAEPHDTVRHLAEYVSLDVELG 230

Query: 243 FV-EQDDILNTMENVLRGVFE 262
           F+ +  D+L  +   L G+ E
Sbjct: 231 FIRDHRDVLAVLREALAGMVE 251



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 14/116 (12%)

Query: 451 KIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           +      PF T P+   E           +  +DL+  G E+ +GG R H       A  
Sbjct: 347 RYPMRKRPFYTHPEPRDERW---------SNSFDLLFRGLELVTGGQRLHRLTDYEAAIR 397

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             G         +    +AF  GMPPHGG A G++R V  L+ A N+REV+LFP  
Sbjct: 398 ARGEEPAA----YASYLQAFAHGMPPHGGFALGLERWVARLVRAANIREVALFPRD 449


>gi|254565151|ref|XP_002489686.1| Mitochondrial lysine-tRNA synthetase [Pichia pastoris GS115]
 gi|238029482|emb|CAY67405.1| Mitochondrial lysine-tRNA synthetase [Pichia pastoris GS115]
 gi|328350105|emb|CCA36505.1| lysyl-tRNA synthetase, class II [Pichia pastoris CBS 7435]
          Length = 540

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 67/352 (19%), Positives = 131/352 (37%), Gaps = 27/352 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
               + +   + G +  +R  G  +IF+DI   +   Q+V +         +        
Sbjct: 79  SSKKIDTLFSVCGKISSIRRAGKGMIFMDIIQDFTKLQLVIHHKMLNLNKEEFSNIHSEF 138

Query: 72  CIDGLVMSRSAETINANIITGQIELSA-QKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            I   V   S          G++ L A Q++++ + A     P    +    +     R 
Sbjct: 139 RIGDHV---SVIGFPGKTDVGELSLKANQRVKLAAPALHPLPP----KLTDTAKINSLRV 191

Query: 131 LD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQ 188
           +D L      + I+ R++II+++R  +    F+E STPI+  S +   A  F+  S   +
Sbjct: 192 VDYLVNRKSQEIILARSKIISTIRKFLEDRQFVEVSTPIIANSGTGANATPFVTSSEHIK 251

Query: 189 GSF-----YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                     L  AP+ + + L+ SGFD+ F+I   FR+E   S   P EF   +   +F
Sbjct: 252 NDMLQPEPLQLRVAPELWLKKLIISGFDKVFEIGKVFRNEGIDSTHNP-EFSTCEFYQTF 310

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
              ++++N   ++ R +  E  N  +     L++ +  A      +   L     +   T
Sbjct: 311 TSLEELMNLTTDLFRSISTELLNAES-----LKLTHIQAKALQHEEFETLEFIPAIEEAT 365

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-NEWARSQGQP 354
              +     V      +   ++   +          F D + +E+   Q   
Sbjct: 366 GKKLPENLGV----AELENYFKSINLEFPKVKSPAQFLDTLSSEYLEPQCAK 413



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 5/100 (5%)

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG--- 524
           S+K  D     + +++L  NG E  +     +      + F     SKE  ++       
Sbjct: 432 SIKYGDRQYDISRRFELFINGNEYVNAYEEENDPFSQNEKFKLQTRSKEKHQDEEALVPD 491

Query: 525 --LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                  + GMPP GG   GIDR+ MLL  +  V  V  F
Sbjct: 492 YKYVTMMEWGMPPTGGWGIGIDRLTMLLTDSARVENVLTF 531


>gi|225680694|gb|EEH18978.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 594

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 63/353 (17%), Positives = 123/353 (34%), Gaps = 56/353 (15%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFE--IAKSVRSEWVLCIDGL 76
            V + G +   R  G  +IFLD+  +    Q++ N           +  +  + L   G 
Sbjct: 95  KVVICGRIQSARSAGSKLIFLDLVQNGRKVQILCNQRHMDAMGVTPEKFKQFYHLLRRGD 154

Query: 77  VMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           V+S            G++ ++  ++ ++++           E+E         R + L  
Sbjct: 155 VLSVIGNPH--RTGRGELSVTVSELPKLITPCLHDIPLRVKEQETSPY----DRHVQLLS 208

Query: 136 -DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYA 193
             T    +  R+ II  +R      +F+E  TPIL + +    AR F   +        A
Sbjct: 209 SPTASDILRTRSAIIQYIRNFFFNRSFMEVETPILASVAGGAVARPFQTCATEFPDRPLA 268

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR--------------------------- 226
           L  AP+ + + L+  GFD+ F+I P FR+E                              
Sbjct: 269 LRIAPELWLKRLVVGGFDKVFEIGPSFRNEGTSYPYIRFFISPMILCISGHPNWDITSLR 328

Query: 227 -----SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT------------ 269
                 +    EF   +   ++ + + +++  E++L G+ +     +             
Sbjct: 329 PPLGLDNTHNPEFTTCEFYHAYADLETLISITESLLTGLSQHIHTLHQTIQSSLSLPPAP 388

Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNP 322
            +  F R+ +  A+ +  + K     P   HN T           ++ L  NP
Sbjct: 389 FTTPFRRLDFIPALEQAMSHKLPNLTPTSTHNPTTQIHELFNNHLNQPLPSNP 441



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 12/100 (12%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVM------------LQAFSNVGISKEVVENRF 522
             + A + +L  +  E+ +     +                  +    VG  +   +   
Sbjct: 485 GQVVAARAELFIDSREVMNMYEEENSPFEQRRKFEGQVGVQGKEMGCGVGSGEGGGKVGD 544

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               RA Q G+PP GG   G+DR+ ML  GA+ + +V  F
Sbjct: 545 ESYLRALQWGLPPTGGWGCGVDRLCMLFTGARRIGDVLSF 584


>gi|169775127|ref|XP_001822031.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
 gi|238496255|ref|XP_002379363.1| aspartyl-tRNA synthetase Dps1, putative [Aspergillus flavus
           NRRL3357]
 gi|83769894|dbj|BAE60029.1| unnamed protein product [Aspergillus oryzae]
 gi|220694243|gb|EED50587.1| aspartyl-tRNA synthetase Dps1, putative [Aspergillus flavus
           NRRL3357]
          Length = 557

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 59/299 (19%), Positives = 108/299 (36%), Gaps = 30/299 (10%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFEIAK---S 64
            D+        + +   V   R     + FL + +    +  V+A  +    ++ K    
Sbjct: 88  DDITDDHYEKEITVVARVDNARVQSAKLAFLMLRQQGKKVQAVIAAAEPISRQMVKYTGG 147

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE-- 122
           +    ++ + G+V        +A +     EL  +K+  ++ A +       + E P   
Sbjct: 148 LNVNSIVQVTGVVKKPQVPIASATL--NNHELHIRKVYTIAEAAQQLPMQVKDAERPPPE 205

Query: 123 ------------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
                               R   R LDL+ +T        + +       MI       
Sbjct: 206 TTEEGNEVDADGVPIVTLKTRLDNRVLDLQTETSQAITWISSGVAELFAEYMIKSGSRWI 265

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            TP L +S+ EG  +        +  + A  Q+PQ YKQ+ +A   +  F+IAP FR ED
Sbjct: 266 FTPKLVSSATEGGSNVFEVKYFKRNGYLA--QSPQLYKQMCIAGDMESVFEIAPVFRAED 323

Query: 225 PRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
             + R   EF  LD E +F     ++L+  E++L  +  +           ++  Y  A
Sbjct: 324 SNTHRHLTEFSGLDFEKTFHGHYHEVLDFAEDLLVFILTQLKERYKDQIAVIQKSYPKA 382



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 27/189 (14%)

Query: 384 TEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-F 440
            +   +RL+  DG +    AG D  +   F  D    + ++LG I    ++  + ++D F
Sbjct: 389 KDGKALRLNYMDGVALLKEAGVDVSEQERFENDFSTAMEKQLGQIIREKYDTDFYVLDKF 448

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNH 499
           P             A  PF             D    + +  YD    G EI SG  R +
Sbjct: 449 PM------------AVRPFY---------TKADPKDARFSNSYDFFMRGEEIMSGAQRIN 487

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
               ++++    GI+ +  +  F     AF+ G PPH G   G++RIVM  LG  NVR  
Sbjct: 488 DVNELMESMRAKGINPD--QEGFEDYLNAFRQGCPPHAGGGLGLNRIVMFFLGLPNVRLA 545

Query: 560 SLFPMSQNF 568
           +LFP     
Sbjct: 546 TLFPRDPQR 554


>gi|170587864|ref|XP_001898694.1| Asparaginyl-tRNA synthetase, cytoplasmic [Brugia malayi]
 gi|158593964|gb|EDP32558.1| Asparaginyl-tRNA synthetase, cytoplasmic, putative [Brugia malayi]
          Length = 516

 Score =  137 bits (344), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 71/436 (16%), Positives = 123/436 (28%), Gaps = 70/436 (16%)

Query: 15  SDVGSFVRLSGWVHRVRPHG---------------------------------------- 34
                 V + GW+HR+R  G                                        
Sbjct: 42  KHRNERVCIKGWIHRMRRQGILQLLFVDYHNWLFSEIDYCLRYFFFFFFFCKDYIYIHNI 101

Query: 35  --------GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETIN 86
                    ++F  +RD  G  QV+          A +V +E  + I G +         
Sbjct: 102 FVFVYLGKSLMFFILRDGTGFLQVLLMDKLCQTYDALTVNTECTVEIYGAIKEVPEG--- 158

Query: 87  ANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRT 146
                   EL A   +I+  A    +      E         R L +R +     +  R 
Sbjct: 159 -KEAPNGHELIADFWKIIGNAPPGGIDNVLNEEASVDKMLDNRHLVIRGENAAALLRLRA 217

Query: 147 RIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
               +MR       ++E + P L  +  EG           + SF  L Q+ Q Y +  +
Sbjct: 218 AATRAMREHFYNAGYLEVAPPTLVQTQVEGGSTLFNLDYFGEQSF--LTQSSQLYLETCI 275

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS- 265
            +     F IA  +R E  R+ R   E+  ++ E  F+  DD++  +E ++    +    
Sbjct: 276 PT-LGDVFCIAQSYRAEKSRTRRHLAEYAHVEAECPFITLDDLMEKIEELVCDTVDRLLA 334

Query: 266 -------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
                                FLR+ Y DAI+       +           E    +  R
Sbjct: 335 DEEAKKLLEHINPKFQPPERPFLRMEYKDAIKWLQEHNVENEFGNTFT-YGEDIAEAAER 393

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGM 372
             +  ++       +    K     R   D     +     PG+  I            +
Sbjct: 394 FMTDTINKPILLNRFPSEIKAFYMQRDAKDNTLTESVDLLMPGVGEIVGGSMRIWKFDEL 453

Query: 373 GPVAKHLNIVNTEAIR 388
               K++ I       
Sbjct: 454 SKAFKNVEIDPKPYYW 469



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAF 508
            +       F M +   ++     +        DL+  G  EI  G +R    + + +AF
Sbjct: 406 NRFPSEIKAFYMQRDAKDNTLTESV--------DLLMPGVGEIVGGSMRIWKFDELSKAF 457

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            NV I  +     +         G  PHGG   G++R +  L    ++R+V L+P 
Sbjct: 458 KNVEIDPKP----YYWYLDQRLYGTCPHGGYGLGLERFICWLTNTNHIRDVCLYPR 509


>gi|303310901|ref|XP_003065462.1| Aspartyl-tRNA synthetase, cytoplasmic , putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240105124|gb|EER23317.1| Aspartyl-tRNA synthetase, cytoplasmic , putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320034649|gb|EFW16592.1| aspartyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 562

 Score =  137 bits (344), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 95/576 (16%), Positives = 175/576 (30%), Gaps = 145/576 (25%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFEIAK---SVRSEWVLCI 73
             V +   V   R     + FL + +    +  V+   +    ++ K    +    ++ +
Sbjct: 103 KEVTVVARVDNARVQSAKLAFLMLRQQGKKVQAVIFAKEPISKQMVKYTGGLNVNSIVQV 162

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE----------- 122
            G+V  +    +N+   +  +EL   KI +++ A +       + E P            
Sbjct: 163 TGIV-KKPEIPVNSATYS-NMELHITKIYMIAQAAQQLPMQVKDAERPPPESNEEGQVDS 220

Query: 123 --------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                     R   R LDL+ +T        + +       M+        T  L+ ++ 
Sbjct: 221 EGTPIVTLKTRLDNRILDLQTETSQAITWISSGVAQLFAEFMLKSGARWIFTSKLSGAAT 280

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EG  D                                  F++    R          G+ 
Sbjct: 281 EGGAD---------------------------------VFELGYFKRKAYLSQSPQLGKQ 307

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
             +          D++N  E  +  VF  E SN +     F+ + ++    R+  +    
Sbjct: 308 MCIAG--------DMMNVFE--IGPVFRAEESNTHRHLTEFIGLDFERTFHRHYHEVLSF 357

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
              +++  ++E     + ++   I    P    + +P  G      + D           
Sbjct: 358 AEELLVFILSELKTRYKDQI-EVIQKSYPKAGDFRLPKDGKALRLKYMD----------- 405

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            G+A +     E+G                                     D  +   F 
Sbjct: 406 -GIALLK----EAG------------------------------------VDVSEQERFE 424

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGN 472
            D    + ++LG I    ++     DF   +      K   A  PF T       +    
Sbjct: 425 NDLTTAMEKQLGRIIREKYD----TDFYVLD------KFPSAVRPFYTKACPEDPTF--- 471

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                 +  YD    G EI SG  R +++E +  A    G+  +     F     AF+ G
Sbjct: 472 ------SNSYDFFMRGEEIMSGAQRINVAEELEAAMIARGVDPKA--EGFEDYLGAFRQG 523

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             PH G   G++RIVM  LG  N+R  +LFP     
Sbjct: 524 CAPHAGGGLGLNRIVMFFLGLPNIRLATLFPRDPQR 559


>gi|308160927|gb|EFO63393.1| Asparaginyl-tRNA synthetase [Giardia lamblia P15]
          Length = 548

 Score =  137 bits (344), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 97/252 (38%), Gaps = 13/252 (5%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKS-VRSEWVLCIDGLVM 78
           V + GW HRVR     + F+ +RD  G  Q+V N        A++ +R+E  +   G+++
Sbjct: 120 VVVFGWCHRVRISSPKLAFVVLRDGTGYCQLVLNEACMATRTAQTMLRTEAAVQAVGILV 179

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           +            G  E+     +I+  +           E     R + R L  R +  
Sbjct: 180 ADKRAQ-------GGYEIQCLYFDIIGPSSGEFETRITP-ESGPDARARERHLIHRGEHG 231

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
              +  R RI+ + R     + + E + P +  +  EG           + ++  L Q+ 
Sbjct: 232 SAILKARGRILRAFRNHFYFKGWTEVTPPTIVNTECEGGSSLFRVDFYGEDAY--LTQSS 289

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           Q Y + ++       + I P FR E   + R   EF  L+ E  F+    +L  +E+ + 
Sbjct: 290 QLYLESVLP-ALGDVYCILPSFRAEKSNTRRHLSEFTHLETEHPFITFSALLGIIEDFVI 348

Query: 259 GVFEEFSNGNTV 270
            V  E  N    
Sbjct: 349 SVVTELKNDKHF 360



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 82/224 (36%), Gaps = 31/224 (13%)

Query: 358 YIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV-------RLDMQDGDSCFFIAG-DPLKF 409
           ++   + E  N     P+ + LN  N + I +       R+   +G       G      
Sbjct: 346 FVISVVTELKNDKHFYPLVQFLNGDNFDKIALSLKKPFRRMRHSEGIDWLNSHGITKEDG 405

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNP-FTMPQGGMES 468
            +F  D     AQE  +I+    E  ++  FP             AH   F M +   + 
Sbjct: 406 TAFTYDDDIPEAQERRMIDTIG-EPVFLTHFP-------------AHLKSFYMARCSDDP 451

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
              +    +     DL+     EI  G +R    E   +AF + G+       R+     
Sbjct: 452 ---SSPDYLLTESVDLLVPTVGEIVGGSMRKWTYEDTYKAFVDAGMPI----ERYYWYLD 504

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + + G  PHGG+  G++R +  LLG   VR+  L+P +    + 
Sbjct: 505 SRKFGGCPHGGMGLGLERFICWLLGIYTVRDTVLYPRAPGLIEP 548


>gi|297284499|ref|XP_002802606.1| PREDICTED: lysyl-tRNA synthetase isoform 3 [Macaca mulatta]
          Length = 423

 Score =  137 bits (344), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 69/151 (45%), Gaps = 4/151 (2%)

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                   +  R++ R+LDL  +   +   + R++++  +R  +    F+E  TP++   
Sbjct: 85  HLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKMVTYIRSFLDELGFLEIETPMMNII 144

Query: 173 SPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
                A+ F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       P
Sbjct: 145 PGGAVAKPFITYHNELDMNLY-MRIAPELYHKILVVGGIDRVYEIGRQFRNEGIDLTHNP 203

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            EF   +  M++ +  D++   E ++ G+ +
Sbjct: 204 -EFTTCEFYMAYADYHDVMEITEKMVSGMVK 233



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 305 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 364

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG   G+DR+ M L  + N++EV LFP  +
Sbjct: 365 YGLPPTGGFGMGLDRVAMFLTDSNNIKEVLLFPAMK 400


>gi|154507904|ref|ZP_02043546.1| hypothetical protein ACTODO_00389 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797538|gb|EDN79958.1| hypothetical protein ACTODO_00389 [Actinomyces odontolyticus ATCC
           17982]
          Length = 539

 Score =  137 bits (344), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 58/297 (19%), Positives = 105/297 (35%), Gaps = 43/297 (14%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFE 60
            +Y     G+     VG    L+G V   R  G + F  + D  G   QV+ +  S   E
Sbjct: 53  EKYAHLEAGEETEDYVG----LAGRVILARNGGKLCFATLMDGEGNKIQVMLSAASVGAE 108

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA------------- 107
              + +++  L   G  +      I++    G++ + A   E+   A             
Sbjct: 109 SLAAYKNDVDL---GDHLFVHGRVISSR--RGELSIFATPAEVTPEAQAEYDAAPTALPA 163

Query: 108 ----------------EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIIN 150
                           +        E    E  R + R LDL      +++V+ R  +  
Sbjct: 164 PDASWAIASKAIRPLPKTWTTEDGEEITLSEDQRIRRRELDLITRPAARDMVRIRAAVNR 223

Query: 151 SMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
           S+R      ++IE  TP+L        AR F           Y L  A + Y +  +  G
Sbjct: 224 SIRENFFRRDYIELETPMLQMIHGGAAARPFTTHMNALDTDLY-LRIATEIYLKRAVVGG 282

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
            DR F++   FR+E   S   P EF  L+   ++ + + +     ++++    +  +
Sbjct: 283 VDRVFEMNRNFRNEGMDSSHSP-EFTSLEAYEAYSDYNGMAELTRDLIQQAARDAFD 338



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 66/207 (31%), Gaps = 32/207 (15%)

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
           E   +   G  ++ L    T        ++  +       D       +      I +EL
Sbjct: 359 EWDRIDLYGSTSEALGEEVTVETPRETLVKYAERIGLEVDDYAV----SGKIVEDIFEEL 414

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
             +    +   ++ DFP     E+   +   H                        ++DL
Sbjct: 415 --VASKLWAPTFVYDFP-----EDTSPLTRYHR----------------SRPGLTEKWDL 451

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIA 540
              GFE  +         V  + F    ++    +            A + G PP GG+ 
Sbjct: 452 YVRGFETGTAYSELADPVVQRERFEAQALAAANGDPEAMVMDEDFLIAMEQGFPPCGGMG 511

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQN 567
            GIDR++M+L G   +RE   FP+ + 
Sbjct: 512 MGIDRLLMVLTGQG-IRETIPFPLVKR 537


>gi|154413436|ref|XP_001579748.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121913958|gb|EAY18762.1| hypothetical protein TVAG_267950 [Trichomonas vaginalis G3]
          Length = 537

 Score =  137 bits (344), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 3/153 (1%)

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
             + +R   R LDLR          ++++    R  ++A +F E  TP L  ++ EG  +
Sbjct: 209 VTQKLRLDNRVLDLRTVANQAIFRLQSKVCQFFREFLLARDFQEIHTPKLIPTASEGGSN 268

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  +  ++ A  Q+PQ YKQ+ + SG  R F+I P FR E   + R   EF  LD 
Sbjct: 269 VFEVKYFDSKAYLA--QSPQLYKQMAVVSGMPRVFEIGPVFRAEKSFTHRHLTEFTGLDA 326

Query: 240 EMSF-VEQDDILNTMENVLRGVFEEFSNGNTVS 271
           EM+F     + L   + +L  VF          
Sbjct: 327 EMAFDTNYHEALLLFQELLCTVFTRLQKECQPE 359



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 50/198 (25%), Positives = 73/198 (36%), Gaps = 24/198 (12%)

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
           VA        E +     +   D+   +  +         D    + + LG +    +  
Sbjct: 363 VASQFGEHVKELVIKPCIINFKDAVKLLNENGHPEMKPDQDLDTELEKCLGRLVREKYG- 421

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
               DF  +  +    K   A  PF TMP              + +  YD+   G EI S
Sbjct: 422 ---TDF--FILD----KFPAAVRPFYTMPDPDDP---------MYSNSYDMFLRGEEIVS 463

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G  R H SE++LQ  +  G+    +         +F+ G PPH G+  G+DRI  L LG 
Sbjct: 464 GAQRIHNSELLLQCAAKKGVDLSPIMP----YVESFRYGAPPHAGLGCGLDRITFLFLGL 519

Query: 554 KNVREVSLFPMSQNFCDL 571
            NVR  SLFP        
Sbjct: 520 HNVRRGSLFPRDPTRVSP 537



 Score = 39.7 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 13/100 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
            +    VG  +   G++ + R      FL IRD     QV ++  +        +  E  
Sbjct: 29  QISEEHVGKVIEFRGFLAKNRSK----FLVIRDQIATIQVYSSVKAN-------IPVESY 77

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
           + I G V                +E+ AQ+I ++S +++ 
Sbjct: 78  VEIKGTVTVPEKPITGCT--KQNLEIQAQRIRVVSKSQQP 115


>gi|289621226|emb|CBI52009.1| unnamed protein product [Sordaria macrospora]
          Length = 566

 Score =  137 bits (344), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 62/309 (20%), Positives = 104/309 (33%), Gaps = 48/309 (15%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA--------NPDSACFEIA 62
           +G   VG  V +  WV   R  G  + F+++R+    T                   + A
Sbjct: 103 IGEEHVGKAVIVRAWVQNARIQGAKMAFVELREEGAWTIQGVFVANNEGTPVSKPMVKFA 162

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--------- 113
             +  E  + ++G V        +  +     EL  +KI +L+ A ++            
Sbjct: 163 AGINPESFVVVEGTVEKPLEPVKSCKVSN--YELHIRKIFVLAAAPQMLGMTLAAANRPI 220

Query: 114 --VFGEREYPES-----------------------IRFKYRFLDLRRDTLHKNIVKRTRI 148
                E   PE                               +  R          R  +
Sbjct: 221 TNFSDEEPAPEKAAEEAVDKLSIAAESSIPAATMLTHLDNIIMHKRAPVQQAIADIRMEV 280

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
            +  R  + +  F E   P L  ++ EG  +       ++ +F A  Q+PQ YKQ  +A 
Sbjct: 281 KDLFRSYLKSHGFKEFEPPCLIGAASEGGANVFRMPYFDKEAFLA--QSPQFYKQFEIAG 338

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNG 267
           G  + F I P FR E+  + R   EF  LD+EM    +  ++L  +E VL  +F      
Sbjct: 339 GRKKVFSIGPVFRAENSNTPRHMTEFTGLDLEMEIKKDYREVLLMLEGVLLHIFRGIKER 398

Query: 268 NTVSNNFLR 276
                  +R
Sbjct: 399 CAAEIELVR 407



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 3/91 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC-GMPPHG 537
              +D    G EI SGG R +  E +       G+  +   N        F+  G+P HG
Sbjct: 475 TNAFDFFLRGQEILSGGQRINDPEELEARIIQKGVDPKS--NGIKEYVDVFRQAGVPAHG 532

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           G   G+DR+V   L   +V   + +P +   
Sbjct: 533 GGGIGLDRVVAWFLNLPSVHLAAYYPRTPKR 563


>gi|145234338|ref|XP_001400540.1| asparaginyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS
           513.88]
 gi|134057486|emb|CAK48840.1| unnamed protein product [Aspergillus niger]
          Length = 574

 Score =  137 bits (344), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 61/327 (18%), Positives = 115/327 (35%), Gaps = 28/327 (8%)

Query: 33  HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITG 92
              +IFL + D YG  Q V   +      A ++  E  + I G + +   +    N    
Sbjct: 164 QKDVIFLTLTDGYGYLQCVLTGNLCKTYDAMTLTLETSIAIHGEMRAVPPKQHAPNNR-- 221

Query: 93  QIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIIN 150
             EL A    I+  A  ++  +      +      +  R L LR +T    +  R   + 
Sbjct: 222 --ELHADFYTIIGRAAGDKEAITTRVAPDADPQTLYDNRHLVLRGETASSVMKVRAATLR 279

Query: 151 SMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF 210
           + R        +E + P +  +  EG           + ++  L Q+ Q Y +  + S  
Sbjct: 280 AFRKTFEENRMLEVTPPAMVQTQVEGGSTLFGFDYYGENAY--LTQSSQLYLETCLPS-L 336

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL------------- 257
              F + P FR E   + R   E+  ++ E+ F+  +D+L+ +ENV+             
Sbjct: 337 GDVFCVCPSFRAEKSLTRRHLSEYTHIEAELDFITFNDLLDHLENVICRVIDLTLAEPAT 396

Query: 258 RGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRN--PIIM-HNVTEHFVHSEFRV 313
           + + E+ + +    S  F R+ Y +AI              P     ++ E        +
Sbjct: 397 KALIEKLNPDFKPPSRPFKRMKYSEAIEWLREHDIPNEEGKPHEFGDDIAEAAERKMTDI 456

Query: 314 FSKI--LSVNPGYEVWAIPAKGGGGNR 338
            ++   L+  P         K     R
Sbjct: 457 INQPIFLTHFPAEIKAFYMKKDVEDRR 483



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                   F M +  +E  +  + + +      L+    EI  G +R    + ++ A+ +
Sbjct: 465 HFPAEIKAFYMKK-DVEDRRVTESVDV------LMPGVGEIVGGSMRMDDWDELMAAYKH 517

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+        +       + G  PHGG   G++R +  L     VR+ SL+P     C 
Sbjct: 518 EGMDPSP----YYWYTDQRKYGTSPHGGYGLGLERFLAWLCARYTVRDCSLYPRFTGRCT 573

Query: 571 L 571
            
Sbjct: 574 P 574


>gi|293190377|ref|ZP_06608809.1| lysine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292820961|gb|EFF79916.1| lysine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 539

 Score =  136 bits (343), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 58/297 (19%), Positives = 105/297 (35%), Gaps = 43/297 (14%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFE 60
            +Y     G+     VG    L+G V   R  G + F  + D  G   QV+ +  S   E
Sbjct: 53  EKYAHLEAGEETEDYVG----LAGRVILARNGGKLCFATLMDGEGNKIQVMLSAASVGAE 108

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA------------- 107
              + +++  L   G  +      I++    G++ + A   E+   A             
Sbjct: 109 SLAAYKNDVDL---GDHLFVHGRVISSR--RGELSIFATPAEVTPEAQAEYDAAPTALPA 163

Query: 108 ----------------EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIIN 150
                           +        E    E  R + R LDL      +++V+ R  +  
Sbjct: 164 PDASWAIASKAIRPLPKTWTTEDGEEITLSEDQRIRRRELDLITRPAARDMVRIRAAVNR 223

Query: 151 SMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
           S+R      ++IE  TP+L        AR F           Y L  A + Y +  +  G
Sbjct: 224 SIRENFFRRDYIELETPMLQMIHGGAAARPFTTHMNALDTDLY-LRIATEIYLKRAVVGG 282

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
            DR F++   FR+E   S   P EF  L+   ++ + + +     ++++    +  +
Sbjct: 283 VDRVFEMNRNFRNEGMDSSHSP-EFTSLEAYEAYSDYNGMAELTRDLIQQAARDAFD 338



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 40/190 (21%)

Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFP 441
                   R+ ++  D               +      I +EL  +    +   ++ DFP
Sbjct: 384 ETLVKYAERIGLEVDDYAV------------SGKIVEDIFEEL--VVSKLWAPTFVYDFP 429

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
                E+   +   H                        ++DL   GFE  +        
Sbjct: 430 -----EDTSPLTRYHR----------------SRPGLTEKWDLYVRGFETGTAYSELADP 468

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            V  + F    ++    +            A + G PP GG+  GIDR++M+L G   +R
Sbjct: 469 VVQRERFEAQALAAANGDPEAMVMDEDFLIAMEQGFPPCGGMGMGIDRLLMVLTGQG-IR 527

Query: 558 EVSLFPMSQN 567
           E   FP+ + 
Sbjct: 528 ETIPFPLVKR 537


>gi|210075817|ref|XP_503198.2| YALI0D23639p [Yarrowia lipolytica]
 gi|199425847|emb|CAG81398.2| YALI0D23639p [Yarrowia lipolytica]
          Length = 542

 Score =  136 bits (343), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 127/353 (35%), Gaps = 32/353 (9%)

Query: 19  SFVRLSGWVHR-VRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GL 76
           S V + G V +  R   G++F+D+       Q V    +   E++K    E +     G 
Sbjct: 81  SHVTVRGRVTKLRRASKGLVFMDLVQDGIKVQTVVKMHAMDPELSKQEFQEKIETFRPGD 140

Query: 77  VMSRSAETINANIITGQIELSA-QKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
           V+S + +        G++ L A +  E+L+       P+   +      R   R +D   
Sbjct: 141 VVSVTGKP--GRTPAGELSLIAVRPAELLT---PCLHPLPSNQSGDVHKRLANRVVDFST 195

Query: 136 DTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFY- 192
               + ++  R  +I  +R       F+E  TPIL+  +    AR F   S     +   
Sbjct: 196 SPESREMIYARATVIAYVRRFFSDRGFLEVETPILSDVAGGASARPFTTESNHLTRTKKK 255

Query: 193 ------------ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                       AL  AP+ + + L+ SGFD+ F++ P FR+E   S   P EF   +  
Sbjct: 256 SKSDCKEITTQIALRVAPELWLKRLVISGFDKVFEVGPSFRNESIDSTHNP-EFTTCEFY 314

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
             + E  D+ +T+E    G+           +   R+       + G    D      + 
Sbjct: 315 WGYAELKDLTDTLEEFFIGLLTTV--ITKHPSYSERLTPWLEEFKKGIKHVDF-----LK 367

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM-NEWARSQG 352
            + +   H   R  + +  +   Y+   +            D +  E+    G
Sbjct: 368 TIADKSGHELPRDLTDVDGLVSMYKSLGLKLPSVLSPAKLWDELAAEYVEKSG 420



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVML-----QAFSNVGISKEVVENRFGGLYRAFQC 531
             + +++L   G E A+G    +     +     Q  S    + +    +  G     + 
Sbjct: 445 ALSKRFELFIGGMEYANGYEEENSPFAQMDKFVSQQQSRDEHADDEAHVQDSGYVTDMEW 504

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+PP  G   GIDR+VM + GAK++++V  F
Sbjct: 505 GLPPTAGCGIGIDRLVMFITGAKSIQQVIPF 535


>gi|256089852|ref|XP_002580965.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238666694|emb|CAZ37204.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 159

 Score =  136 bits (343), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 5/157 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y++H+CG+L    + S V + GW+   R      FL +RD  G+ Q+  + +S       
Sbjct: 8   YKSHACGELSTQHINSTVTVCGWLEFCRLSSR--FLVLRDDRGLIQIYCDKNSL---KIP 62

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
              SE VL + G V +R  + +N  + TG+IE+ A+ IEILS +  L           E 
Sbjct: 63  QFNSESVLRVTGKVQARPEKDVNKRMPTGEIEIVAESIEILSHSSPLSFLPKDAANVNEM 122

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN 160
            R KYR++DLR   + +NI  R+ II  MR  +   N
Sbjct: 123 ERLKYRYIDLRSSNMQRNIRFRSSIILQMRSFLCQNN 159


>gi|195160946|ref|XP_002021332.1| GL25269 [Drosophila persimilis]
 gi|194118445|gb|EDW40488.1| GL25269 [Drosophila persimilis]
          Length = 397

 Score =  136 bits (343), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 56/297 (18%), Positives = 104/297 (35%), Gaps = 28/297 (9%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           FL +RD  G  Q V             + +E  + + G++ +  +      I  G  EL 
Sbjct: 2   FLTLRDGTGFLQCVLTDLLCQTYQGLVLSTESSVVLYGILKAVPSG----KIAPGGHELH 57

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157
               E++ +A           E    ++   R + +R +   K +  R+ ++ + R    
Sbjct: 58  VDYWELIGLAPPGGADAILNEEALPDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRDHYF 117

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
              + E + P L  +  EG           + +F  L Q+ Q Y +  +       F IA
Sbjct: 118 DRGYNEVTPPTLVQTQVEGGSTLFKMQFFGEEAF--LTQSSQLYLETCLP-ALGDVFTIA 174

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQ--------DDILNTMENVLRG-----VFEEF 264
             +R E  R+ R   E+  ++ E  F+          D + + ++ VL+      V E  
Sbjct: 175 QSYRAEQSRTRRHLAEYTHVEAECPFISYDDLLDRLEDLVCDVVDRVLKSPYGHLVMELN 234

Query: 265 SNGNTVSNNFLRICY--------DDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
            +       F R+ Y        D     +G D P+     +   + E  +   F V
Sbjct: 235 PDFKPPKKPFRRMDYAKNNVTKDDGTFYEFGEDIPEAPERKMTDTINEPILLCRFPV 291



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   A   F M +   +      +         ++ N  EI  G +R   SE +L  +  
Sbjct: 288 RFPVAIKSFYMSRCPEDKRLTESVDV-------MLPNVGEIVGGSMRIWDSEELLNGYKR 340

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI        +         G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 341 EGIDPTP----YYWYTDQRIYGTIPHGGCGLGLERFLFWLLNRYHIREVCLYPR 390


>gi|302691556|ref|XP_003035457.1| hypothetical protein SCHCODRAFT_14619 [Schizophyllum commune H4-8]
 gi|300109153|gb|EFJ00555.1| hypothetical protein SCHCODRAFT_14619 [Schizophyllum commune H4-8]
          Length = 490

 Score =  136 bits (343), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 100/271 (36%), Gaps = 28/271 (10%)

Query: 8   SCGDLGVSDVGSF--VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           +  ++  S++     V L+GW+  +R    + F  I D      + A   +      K +
Sbjct: 19  TIKEILGSNIPQETSVSLNGWIKSIRKQKRVSFAVIYDGSSAKGIQAVFPNTL--NVKDL 76

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
            +   + + G ++                EL  + +++L    +   P+  +    E +R
Sbjct: 77  TNGSSVRLTGNLVPSPGSGQAK-------ELQVKAVDVLGACPQETYPIQKKDLTNEYLR 129

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV--- 182
            +   L  R   +   +  R  +  S+   + +++F+    PILTA+  EGA +      
Sbjct: 130 -ENVHLRARTTAIAAMLRLRDCLHRSIHDYLKSQSFVHVHAPILTANDAEGAGETFRIAP 188

Query: 183 ---------PSRVNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                        +   F+   A      Q       +   R +   P FR E  ++ R 
Sbjct: 189 VAAHPDAQSTETQSPTEFFGAPAHLTVSSQLHMEAFQAALSRVYTANPAFRAERSQTSRH 248

Query: 231 PGEFYQLDMEMSFVE-QDDILNTMENVLRGV 260
             EF+ ++ E +  E   ++ +  E++LR +
Sbjct: 249 LAEFWMVEPEWTLTEGITEVCDVTEDLLRDI 279



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 48/144 (33%), Gaps = 22/144 (15%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             ++ ++P                 F M        +    +S     +DL+     E+ 
Sbjct: 363 PVFVTNYP------------REIKAFYMRVDDPSLPREQQTVSC----FDLLVPHMGELV 406

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENR-----FGGLYRAFQCGMPPHGGIAAGIDRIV 547
            G +R   ++V+ +     G+      +      +       + G  PHGG   G +R+V
Sbjct: 407 GGSVREERADVLEEKMREEGMILPEQSSEVDEGPYAWYLSLRKFGATPHGGFGLGFERLV 466

Query: 548 MLLLGAKNVREVSLFPMSQNFCDL 571
             +    +V+E    P +    DL
Sbjct: 467 SWVGDVDSVKECIPVPRTVGRIDL 490


>gi|295395018|ref|ZP_06805228.1| probable lysyl-tRNA synthetase [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294972085|gb|EFG47950.1| probable lysyl-tRNA synthetase [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 1125

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 90/232 (38%), Gaps = 15/232 (6%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           ++F+DI       Q V +                 + + G V +            G++ 
Sbjct: 704 LVFMDIEQDGAFVQTVWDRSKVSDWHVSLFDVGDFVSVTGHVGTTDH---------GELS 754

Query: 96  LSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD-TLHKNIVKRTRIINSMRC 154
           +  ++  +L+ A   P P  G     E  R   R LDL  D +    +V R+  I S+R 
Sbjct: 755 VFVEQFTLLAKAIR-PTPALGH-PVGEEERRTNRSLDLLTDVSARDILVARSSAIRSLRD 812

Query: 155 RMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
            + A++++E  TP+L T      AR F            +L  AP+ Y + LM  G DR 
Sbjct: 813 TLHAQSYMEVETPMLHTVHGGAAARPFTTHINAYDMDL-SLRIAPELYLKRLMVGGMDRI 871

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           F+I   FR+E   +   P EF  L+   S +   D+      ++       +
Sbjct: 872 FEIGRNFRNEGVDATHNP-EFTSLEAYASGLTYHDMERLTIALIENAARAVN 922



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 5/89 (5%)

Query: 479  AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMP 534
            + Q+DLV  G E+ +         +  +  +   ++                 A + G P
Sbjct: 1031 SEQWDLVAFGMEVGTAYSELIDPMIQRERLTEQSLAAAAGDPEAMEVDEAFLTALEMGAP 1090

Query: 535  PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            P GG+  G+DR+VM+L  A  +R+   FP
Sbjct: 1091 PMGGLGLGVDRVVMMLT-ATTIRQTLTFP 1118


>gi|34533120|dbj|BAC86604.1| unnamed protein product [Homo sapiens]
          Length = 423

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 6/152 (3%)

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTAS 172
                   +  R++ R+LDL  +   +   + R++II  +R  +    F+E  TP++   
Sbjct: 85  HLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMN-I 143

Query: 173 SPEGA--RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            PEGA  + F+        + Y +  AP+ Y ++L+  G DR ++I   FR+E       
Sbjct: 144 IPEGAVAKPFITYHNELDMNLY-MRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHN 202

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           P EF   +  M++ +  D++   E ++ G+ +
Sbjct: 203 P-EFTTCEFYMAYADYHDLMEITEKMVSGMVK 233



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 305 KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 364

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 365 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMK 400


>gi|195488867|ref|XP_002092495.1| GE11636 [Drosophila yakuba]
 gi|194178596|gb|EDW92207.1| GE11636 [Drosophila yakuba]
          Length = 460

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/324 (19%), Positives = 124/324 (38%), Gaps = 54/324 (16%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  + + GW+  VR      FLDI D    ++             + +    V+   G +
Sbjct: 24  GDSLAIQGWIKNVRRLKNNTFLDINDGSTSSRFQVVVPRTPEN--QHLAPGSVIAAVGEI 81

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRRD 136
                         G  EL A ++E L+    +   P   ++++P     ++  L  R D
Sbjct: 82  QVAP---------NGSFELHASQVETLAEGHLQEGYPFSPKQKHPPEYVREHLHLRSRVD 132

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP------------- 183
            +   +  R +   ++   M A++F++ +TP+LT +  EGA +                 
Sbjct: 133 FVAAQMRVRHKAQKAIHDYMDAQDFVQINTPLLTTNDCEGAGEVFRVQPDSEDLLKQMKR 192

Query: 184 -------SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                  S  +  +F  L  + Q + +  M  G    + ++P FR E+ +S     EFY 
Sbjct: 193 PNVPVEQSYFDGKAF--LSVSGQLHLE-AMTYGLGNTYTLSPAFRAENSKSPLHLAEFYM 249

Query: 237 LDMEMSFVEQ-DDILNTMENVLRGVFEEF------------------SNGNTVSNNFLRI 277
            + E++ +E  + +   +E +L+ V                      S+   +   + +I
Sbjct: 250 FEAELAHLEVLEKLAQFIEKMLKSVTNRLLETSAEDLSFCQRNSNSSSDLPWLQVPWKKI 309

Query: 278 CYDDAIRRYGTDKPDLRNPIIMHN 301
            YD+A++    +K  L+ PI ++ 
Sbjct: 310 SYDEALQVLQENKNSLKTPINLNE 333



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 55/149 (36%), Gaps = 30/149 (20%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           QE  +++ +C    +++D+P                PF M       +   +   + A  
Sbjct: 339 QEFFLVD-HCGAPVFVVDWP------------AQQKPFYMK------ISRTNPNRVHAL- 378

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+     E+  G +R    +++         S   +           + G  P GG  
Sbjct: 379 -DLLMPAVGELCGGSLRESDPDILR--------SHPQLPKDLEWYVDLRKYGGIPTGGFG 429

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G +R + L+ G KN+R+V  FP   + C
Sbjct: 430 MGFERYLQLVTGVKNIRDVIPFPRYPHSC 458


>gi|119194865|ref|XP_001248036.1| aspartyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
          Length = 565

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 95/576 (16%), Positives = 175/576 (30%), Gaps = 145/576 (25%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFEIAK---SVRSEWVLCI 73
             V +   V   R     + FL + +    +  V+   +    ++ K    +    ++ +
Sbjct: 106 KEVTVVARVDNARVQSAKLAFLMLRQQGKKVQAVIFAKEPISKQMVKYTGGLNVNSIVQV 165

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE----------- 122
            G+V  +    +N+   +  +EL   KI +++ A +       + E P            
Sbjct: 166 TGIV-KKPEIPVNSATYS-NMELHITKIYMIAQAAQQLPMQVKDAERPPPESNEEGQVDS 223

Query: 123 --------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                     R   R LDL+ +T        + +       M+        T  L+ ++ 
Sbjct: 224 EGTPIVTLKTRLDNRILDLQTETSQAITWISSGVAQLFAEFMLKSGARWIFTSKLSGAAT 283

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EG  D                                  F++    R          G+ 
Sbjct: 284 EGGAD---------------------------------VFELGYFKRKAYLSQSPQLGKQ 310

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
             +          D++N  E  +  VF  E SN +     F+ + ++    R+  +    
Sbjct: 311 MCIAG--------DMMNVFE--IGPVFRAEESNTHRHLTEFIGLDFERTFHRHYHEVLSF 360

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
              +++  ++E     + ++   I    P    + +P  G      + D           
Sbjct: 361 AEELLVFILSELKTRYKDQI-EVIQKSYPKAGDFRLPKDGKALRLKYMD----------- 408

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFA 413
            G+A +     E+G                                     D  +   F 
Sbjct: 409 -GIALLK----EAG------------------------------------VDVSEQERFE 427

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGN 472
            D    + ++LG I    ++     DF   +      K   A  PF T       +    
Sbjct: 428 NDLTTAMEKQLGRIIRERYD----TDFYVLD------KFPSAVRPFYTKACPEDPTF--- 474

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                 +  YD    G EI SG  R +++E +  A    G+  +     F     AF+ G
Sbjct: 475 ------SNSYDFFMRGEEIMSGAQRINVAEELEAAMIARGVDPKA--EGFEDYLGAFRQG 526

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             PH G   G++RIVM  LG  N+R  +LFP     
Sbjct: 527 CAPHAGGGLGLNRIVMFFLGLPNIRLATLFPRDPQR 562


>gi|119195055|ref|XP_001248131.1| hypothetical protein CIMG_01902 [Coccidioides immitis RS]
          Length = 529

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/276 (19%), Positives = 101/276 (36%), Gaps = 26/276 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             S     V + G V  VR      F +I D   I  V A       E A  + +   + 
Sbjct: 41  NTSLDHREVVVRGLVRSVRKQKHWAFAEISDGSTIQPVQA---ILSPEQAADLTTGGAVE 97

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G+         +        EL A  ++++  A+    P+  ++ + +        L 
Sbjct: 98  ISGVWTPSPGRNQSH-------ELKATDVKLVGEADPQTYPIQ-KKYHSQDFLRTIPHLR 149

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAEN---FIECSTPILTASSPEGARDFLVPS----- 184
            R          R+  I        +     FI+   P++T+S  EGA +    S     
Sbjct: 150 FRTPFNSLLSRFRSECIYQATNVFHSRPGLNFIQVQPPLITSSDCEGAGEVFRVSPREAA 209

Query: 185 -RVNQGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  ++  P+    + Q + +   A+     + ++P FR E   + R   EFY L+ 
Sbjct: 210 AEGEDEEYFRAPKYLTVSSQLHLE-AYAADLGNVWTLSPTFRAEKSDTPRHLSEFYMLEA 268

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           E++FV + D++   +E+ +R + E+  N       F
Sbjct: 269 ELNFVNDLDELTKFVESFIRELTEKLYNTPVARELF 304



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 49/160 (30%), Gaps = 37/160 (23%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG-FEI 491
              +I D+P             A  PF M   G +S    D        +DL+     E+
Sbjct: 384 APIFITDYP------------KALKPFYMAPSGTQS---TDPEKETVACFDLIMPKVCEV 428

Query: 492 ASGGIRNHMSEVMLQAFSNVGI---------------------SKEVVENRFGGLYRAFQ 530
             G +R H  E ++Q      +                       +             +
Sbjct: 429 VGGSLREHRLENLIQNMREHEMLRARPNEGSSVASDDMTYPFLRPDEDLGSLRWYADLRR 488

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G  PHGG   G DR +  L G  ++R+V  FP      D
Sbjct: 489 WGSAPHGGFGLGFDRFLSYLAGVGSIRDVVPFPRYFGKAD 528


>gi|303310747|ref|XP_003065385.1| asparaginyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240105047|gb|EER23240.1| asparaginyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320034745|gb|EFW16688.1| asparaginyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 529

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/276 (19%), Positives = 101/276 (36%), Gaps = 26/276 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             S     V + G V  VR      F +I D   I  V A       E A  + +   + 
Sbjct: 41  NTSLDHREVVIRGLVRSVRKQKHWAFAEISDGSTIQPVQA---ILSPEQAADLTTGGAVE 97

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           I G+         +        EL A  ++++  A+    P+  ++ + +        L 
Sbjct: 98  ISGVWTPSPGRNQSH-------ELKATDVKLVGEADPQTYPIQ-KKYHSQDFLRTIPHLR 149

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAEN---FIECSTPILTASSPEGARDFLVPS----- 184
            R          R+  I        +     FI+   P++T+S  EGA +    S     
Sbjct: 150 FRTPFNSLLSRFRSECIYQATNVFHSRPGLNFIQVQPPLITSSDCEGAGEVFRVSPREAA 209

Query: 185 -RVNQGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  ++  P+    + Q + +   A+     + ++P FR E   + R   EFY L+ 
Sbjct: 210 AEGEDEEYFRAPKYLTVSSQLHLE-AYAADLGNVWTLSPTFRAEKSDTPRHLSEFYMLEA 268

Query: 240 EMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           E++FV + D++   +E+ +R + E+  N       F
Sbjct: 269 ELNFVNDLDELTKFVESFIRELTEKLYNTPVARELF 304



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 48/160 (30%), Gaps = 37/160 (23%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG-FEI 491
              +I D+P             A  PF M     +S    D        +DL+     E+
Sbjct: 384 APIFITDYP------------KALKPFYMAPSATQS---TDPEKETVACFDLIMPKVCEV 428

Query: 492 ASGGIRNHMSEVMLQAFSNVGI---------------------SKEVVENRFGGLYRAFQ 530
             G +R H  E ++Q      +                       +             +
Sbjct: 429 VGGSLREHRLENLIQNMREHEMLRARRNEGSSAASDDMTYPFLRPDENLGSLRWYADLRR 488

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G  PHGG   G DR +  L G  ++R+V  FP      D
Sbjct: 489 WGSAPHGGFGLGFDRFLSYLTGVGSIRDVVPFPRYFGKAD 528


>gi|327308714|ref|XP_003239048.1| aspartyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326459304|gb|EGD84757.1| aspartyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 563

 Score =  135 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/279 (20%), Positives = 103/279 (36%), Gaps = 29/279 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFEIAK---SVR 66
           L        + +   V   R     + FL + +    I  V+A  +    ++ K    + 
Sbjct: 97  LSDEHYEKEITVIARVDNARVQSAKLAFLMLRQQGKKIQAVIALKEPLSKQMIKWTGQLN 156

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
              ++ + G+V        +A++    +EL   KI ++S A  +      + E P     
Sbjct: 157 VNSIVQVSGVVKKPEIPVHSASLPN--MELHITKIYMISEAIPMLPMQVKDAERPPPEST 214

Query: 123 ---------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
                            R   R LDL+ +T    +   + +       M+        T 
Sbjct: 215 EEGLVDTDGTPIVTLKTRLDNRILDLQTETSQAIMAISSGVAQLFSEYMLKSGSRWIFTS 274

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            +T ++ EG       S   + ++  L Q+PQ  KQ+ +A      F+I P FR ED  +
Sbjct: 275 KITGAATEGGSGVFEISYFKRKAY--LSQSPQLGKQMCIAGDMMSVFEIGPVFRAEDSNT 332

Query: 228 DRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFS 265
            R   EF  LD E +F     ++L+  EN+L  +  E  
Sbjct: 333 HRHLTEFIGLDFERTFQKHYHEVLDFAENLLVFILSELK 371


>gi|227497075|ref|ZP_03927324.1| lysine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226833440|gb|EEH65823.1| lysine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 558

 Score =  135 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/296 (20%), Positives = 109/296 (36%), Gaps = 39/296 (13%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPDSACFE 60
            RY +H   D    DV   V ++G V  +R  G + F+ + D  G T Q + +  +   E
Sbjct: 71  ERY-SHLEADQETDDV---VGVAGRVTFLRSSGKLCFVALADGAGRTLQAMISAKNLPGE 126

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQ--------------------- 99
              S+ S       G  +      I++    G++ + A+                     
Sbjct: 127 GHTSLASFKSDVDLGDHLFVHGRVISSR--RGELSVMAETALTAGHSAEQLPELGDDAVE 184

Query: 100 --KIEILSVAEELPLPVFGERE-----YPESIRFKYRFLDLRRDTLHKNIVK-RTRIINS 151
                I S A       +   +       E  R + R LDL      +++V+ R  ++ S
Sbjct: 185 VPAWRIASKALRPLPKTWTNDKGETVSLSEDNRVRRRELDLLTRPAARDMVRTRAAVVRS 244

Query: 152 MRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF 210
           +R      +++E  TP+L        AR F+          Y L  A + Y +  +  G 
Sbjct: 245 LRENFHRRDYLELETPMLQVIHGGAAARPFVTHMNAFDMDLY-LRIATEIYLKRAVVGGV 303

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           DR F+I   FR+E   S   P EF  L+   ++ + + +     N+++    +   
Sbjct: 304 DRVFEINRNFRNEGADSSHSP-EFAALEAYEAYSDYNGMAELTRNLVQQAARDAFG 358



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 63/191 (32%), Gaps = 40/191 (20%)

Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFP 441
            +  A+  +LD++  D               A      I +E   +    +   ++ DFP
Sbjct: 404 EHLVALAEKLDLEVDDFAV------------AGKIVEDIFEE--TVGNKLWAPTFVYDFP 449

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
                E+   +   H                        ++DL   GFE+ +        
Sbjct: 450 -----EDTSPLTRYHR----------------SKPGLTEKWDLYVRGFELGTAYSELADP 488

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            V  + F    ++    +            A + G PP GG+  GIDR++M L G   +R
Sbjct: 489 VVQRERFEAQALAAANGDPEAMVLDEDFLVAMEQGFPPCGGMGMGIDRLLMALTGQG-IR 547

Query: 558 EVSLFPMSQNF 568
           E   FP+ +  
Sbjct: 548 ETITFPLVKRA 558


>gi|119189761|ref|XP_001245487.1| hypothetical protein CIMG_04928 [Coccidioides immitis RS]
          Length = 535

 Score =  135 bits (341), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 66/293 (22%), Positives = 114/293 (38%), Gaps = 25/293 (8%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIA--KSVRSEWVLCIDGLV 77
           V L G +   R  G  ++F D+       Q++ N           +  R  + L   G V
Sbjct: 89  VFLYGRIRSQRTAGSKLVFFDLWQDGHKVQILCNQRILGVTGVSPERFREFYHLLQRGDV 148

Query: 78  MSRSAETINANIITGQIELSAQKI-EILSVA-EELPLPVFGEREYPESIRFKYRFLD-LR 134
              +          G++ L A ++  +LS    ++P+        P       R +  L 
Sbjct: 149 YYLAITGKPHRTGRGELTLLASELPTLLSPCLHDVPVDTKEHAVSPYE-----RHVQFLA 203

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-RDFLVPSRVNQGSFYA 193
              +   +  R+ I+  +R   +   FIE +TPI+ A++     R F   +  +     A
Sbjct: 204 DPGVADILRARSSIVQHIRNFFLERRFIEVNTPIIAAAAGGAIARPFHTTASESVEQLLA 263

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ + + L+  GFDR F+I P FR+E       P EF   +   +F + + ++   
Sbjct: 264 LRIAPELWLKRLIVGGFDRIFEIGPSFRNEGLDKTHNP-EFTTCEFYQAFADLECLMQMT 322

Query: 254 ENVLRGVFEEFSNGN-----------TVSNNFLRICYDDAIRRY-GTDKPDLR 294
           E +L G+ +     N             S  F RI +  A+    G   PDL+
Sbjct: 323 ETLLSGLSQNIRELNEKLGTLHPIYVDFSTPFRRIDFVPALESAMGHTLPDLK 375



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 9/106 (8%)

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-----GISKE 516
           PQ    +   N    + A   +L   G E+ +     +      + F          +  
Sbjct: 414 PQCKDPTFIINHPEFVSARA-ELFVEGKEVVNTYEEENSPFEQRRKFEEQLSYRDPENPG 472

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            ++       +A + G+PP GG   GIDR+ ML  GA+ + +V  F
Sbjct: 473 ELDES---YLQALEWGLPPTGGWGCGIDRLCMLFTGARRIGDVLSF 515


>gi|146421671|ref|XP_001486780.1| hypothetical protein PGUG_00157 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 544

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 13/253 (5%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           ++ G +  VR  G GI FLD+       Q++A+       +    +    L     V++ 
Sbjct: 85  KIEGRISLVRRSGRGIYFLDLVQDDEKVQLMAHHKLMELSVDDFDQHHSFLRSGDYVVAV 144

Query: 81  SAETINANIITGQIELSAQK-IEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTL 138
                 +    G++ L     IE++S      L    E+    S+  K R LD +    L
Sbjct: 145 G---FPSTTNVGELTLKLNCPIELVSPCL--NLTTIPEKLSDRSLINKNRVLDYIVSPEL 199

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVN---QGSFYAL 194
            +++V R+ +I ++R   +   F+E  TP+L  + +   A+ F    R     +    +L
Sbjct: 200 REHMVIRSLVIQAIRSFFLQRQFLEVQTPLLAGNGTGANAQPFKTALRALGLLEEESLSL 259

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ + + L+ SGFD+ F+I P FR+E   +   P EFY  +    F+  ++++   +
Sbjct: 260 RVAPELWLKRLVISGFDKVFEIGPSFRNEGVDATHNP-EFYTCEFYQLFLSLEELMEITQ 318

Query: 255 NVLRGVFEEFSNG 267
           ++   +    S  
Sbjct: 319 DLFAHIHSSLSTH 331



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVM------LQAFSNVGISKEVVENRFGGLYRAFQC 531
            + +++L  +G E  +     +            QA        E +   +    R  + 
Sbjct: 446 ISSRFELFIDGKEYVNSYEEENSPFAQVSKFKIQQAAKLDHHDPEALVPDWQ-YARVMEY 504

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+PP GG   GIDR+VML  GA  + +V  F
Sbjct: 505 GLPPTGGWGCGIDRLVMLFSGASRISQVLPF 535


>gi|157129935|ref|XP_001661824.1| aspartyl-tRNA synthetase [Aedes aegypti]
 gi|108872015|gb|EAT36240.1| aspartyl-tRNA synthetase [Aedes aegypti]
          Length = 480

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/321 (18%), Positives = 111/321 (34%), Gaps = 38/321 (11%)

Query: 2   HRYR--THSCGDL-----GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           +++R  +H    +     G    G  + + GWV  VR      FL+I D      +    
Sbjct: 19  NQFRCISHFSASIWDVTSGKHREGDQLNVKGWVKSVRKLKEHAFLEINDGSCNKNLQLVV 78

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLP 113
           D A             +   G +               Q+EL  ++++           P
Sbjct: 79  DKA---QLNGAAYGSSVDASGTLGVTPKN---------QLELKVERLQEFGKCPLSEGYP 126

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
            + ++ YP      +  L  +  +L   +  R          +  E F +  TPI+T++ 
Sbjct: 127 FYPKKSYPPDYVRNHLHLRPQVSSLASTLRVRHHATKCFNDYLDREGFFQIHTPIITSND 186

Query: 174 PEGARDFLVPSRVNQG-----------------SFYALPQAPQQYKQLLMASGFDRYFQI 216
            EGA +  +    +                      A      Q     M+ G  + +  
Sbjct: 187 CEGAGEAFLVRPASADLLKQMAKKDVPLDRAYFDRQAYLTVSGQLHLEAMSHGLGKVYTF 246

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            P FR E+ +S     EFY L++E +F+E  +D+ N +E++++ V +   +  +     +
Sbjct: 247 GPTFRAENSKSPIHLSEFYMLELEEAFMETLEDLTNRIESMIKHVTKSLLDVASEDLAAV 306

Query: 276 RICYDDAIRRYGTDKPDLRNP 296
           R   DD+         D   P
Sbjct: 307 RKLTDDSTLEESFSWLDKPYP 327



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 27/138 (19%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             +++D+P        K I      F M +         +   + A  + LV +  E+  
Sbjct: 370 PLFVIDWP--------KAIKS----FYMREN------RTEPALVDAMDF-LVPHVGELVG 410

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G +R +  + +         +K   +          + G  P  G   G++R +  +L  
Sbjct: 411 GSVRENEYDRL--------KAKLPDQEALRWYLELRKFGSVPTAGFGLGLERYLCWVLNV 462

Query: 554 KNVREVSLFPMSQNFCDL 571
            N+R+V  FP   + C +
Sbjct: 463 HNIRDVIPFPRWAHNCSM 480


>gi|241957335|ref|XP_002421387.1| lysine--tRNA ligase, putative; mitochondrial lysyl-tRNA synthetase,
           putative [Candida dubliniensis CD36]
 gi|223644731|emb|CAX40722.1| lysine--tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 535

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/258 (21%), Positives = 99/258 (38%), Gaps = 14/258 (5%)

Query: 23  LSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           L G +  +R  G  + F+DI       Q++A       + A          I   +  R 
Sbjct: 102 LEGKITSMRKSGKAMYFIDIIQDNCSVQIMATNKLMGMDPAAFNECHSFFKIGDYIAVRG 161

Query: 82  AETINANIITGQIELSAQK-IEILSVAEELPLPVFGEREYPESIRFKYRFL-DLRRDTLH 139
                +   TG++ L   K IE+L+            R     +    R L  L      
Sbjct: 162 ---YASRTKTGELTLKLNKPIEMLTPVLSKVP----NRLEDRGLINNNRVLNYLVNPDSK 214

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
             I+ ++++I ++R  ++  +F+E  TPIL+           V     +G    L  AP+
Sbjct: 215 NAIIVKSKVIQAIRNFLLDRDFLEVQTPILSGQGTGANATPFVTK--FKGDPVHLRVAPE 272

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + L+  GFDR F+I   FR+E       P EF   +   ++   D+++   E++   
Sbjct: 273 LWLKKLVIGGFDRVFEIGSNFRNEGIDMTHNP-EFSTCEFYQAYTSLDELMKMTEDMFGY 331

Query: 260 VFEEFS-NGNTVSNNFLR 276
           VF +          NF +
Sbjct: 332 VFAKLGVTNKFPVGNFPK 349



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 13/115 (11%)

Query: 459 FTMPQGGMESLKGNDLLSI----KAFQYDLVCNGFEIASGGIRNHMS-------EVMLQA 507
           F   Q  + S              + +++L  N  E+A+     +         ++  Q 
Sbjct: 414 FIYNQPEIMSPLAKSTTDAAGNRISSRFELFINAREMANAYEEENDPCKQLEKFKLQQQM 473

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +     + ++ +      RA + G+PP GG   GIDR+ ML+ GA  + +V  F
Sbjct: 474 KTAYNDQEMLIPDH--NYVRAMEYGLPPTGGWGCGIDRLAMLIAGANRIEDVLTF 526


>gi|283457248|ref|YP_003361818.1| lysyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283133233|dbj|BAI63998.1| lysyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 527

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 96/260 (36%), Gaps = 12/260 (4%)

Query: 31  RPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMSRSAETINANI 89
           R  G + F  +    G          +  E+ +   +EW   +D G  +  +   I +  
Sbjct: 89  RNTGKLCFATL--QGGTEGKRIQAMLSLAEVGEESLAEWKSLVDLGDHVFVTGRVIVSR- 145

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR-RDTLHKNIVKRTRI 148
             G++ +     ++ S A      +   ++  E  R + R+LDL  RD   + + KR  I
Sbjct: 146 -RGELSIMVTDWKMASKALRPMPVL--HKDLNEETRVRQRYLDLMVRDEARELVKKRALI 202

Query: 149 INSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
             ++R  +    +IE  TP+L        AR F             +  A +   +  + 
Sbjct: 203 TRTVRRVLEDHGYIEVETPVLQLVHGGATARPFRTHLNAFD-QPMTMRIATELPLKRAVV 261

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            G DR ++I   FR+E   S   P EF  L+   ++ +Q  +   M+ +++   +     
Sbjct: 262 GGIDRVYEIGRVFRNEGVDSTHSP-EFTTLECYETYADQFVMAERMKEIIQSCAKAV-GT 319

Query: 268 NTVSNNFLRICYDDAIRRYG 287
             +      I      +  G
Sbjct: 320 ERIETENGTIDLFGEWKWVG 339



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 16/105 (15%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
               +DL+  G E  +         +  +  +   +     ++          RA + G 
Sbjct: 420 LIEAWDLIIGGMERGTAFSELIDPVIQRERLTAQSLLAAAGDDEAMELDEDFLRALEHGA 479

Query: 534 PPHGGIAAGIDRIVMLLLG------------AKNVREVSLFPMSQ 566
           PP GG+  GIDR++MLL G               +RE  LFP+ +
Sbjct: 480 PPMGGLGLGIDRLIMLLAGDQDPERPGTVVRQPGIRETILFPLMK 524


>gi|312222238|emb|CBY02178.1| similar to cytoplasmic asparaginyl-tRNA synthetase [Leptosphaeria
           maculans]
          Length = 575

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/286 (22%), Positives = 108/286 (37%), Gaps = 25/286 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VHR R    ++F+ +RD YG  QV+   + A    A ++  E  + I G +
Sbjct: 148 GTRVRVFGRVHRERRQKDVMFVTLRDGYGYMQVILTGNLAKTYDALTLTRESSMEILGEL 207

Query: 78  MSRSAETINANIITGQIELSAQKIEIL----SVAEELPLPVFGEREYPESIRFKYRFLDL 133
               A     N      EL A   +I     +   +  +     ++   +     R L L
Sbjct: 208 RQIPAGAHAPNDR----ELHADFYKIHPGWKAAGGDDAITNRVSKDTEHATLLDLRHLTL 263

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +T  K ++ R  +  +           + S P L  +  EG          N+ ++  
Sbjct: 264 RGETASKVMIVRDVVEYAFNQVYKELRLRKVSPPALVQTQVEGGATLFKFGYYNEEAY-- 321

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL--- 250
           L Q+ Q Y +  + S     + I   FR E   + R   E+  ++ E+ ++  DD+L   
Sbjct: 322 LTQSSQLYLETCLPS-MGDVYCIEKSFRAEKSLTRRHLAEYTHIEAELDYINFDDLLTHL 380

Query: 251 -NTMENVL----------RGVFEEFSNGNTVSNNFLRICYDDAIRR 285
              M  VL          + + +           F R+ Y DAI  
Sbjct: 381 EEVMCRVLEVTMSDPVIKQHIMDLNPEFRMPERPFKRMKYQDAIDW 426



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 16/135 (11%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++ P +           A   F M +   ++     +         L+    EI  G +
Sbjct: 457 IINRPIFL-----THFPTAIKAFYMLKDKDDARVTESVDC-------LMPGVGEIVGGSM 504

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R    + ++ AF+   I        +       + G  PHGG   G++R +  L     V
Sbjct: 505 RMDNYDELMAAFAREQIDPAA----YYWYTDQRKYGSSPHGGYGLGLERFLAWLCKQHTV 560

Query: 557 REVSLFPMSQNFCDL 571
           R+  L+P     C  
Sbjct: 561 RDCCLYPRYFGRCKP 575


>gi|255326114|ref|ZP_05367201.1| lysine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255296825|gb|EET76155.1| lysine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 527

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 95/260 (36%), Gaps = 12/260 (4%)

Query: 31  RPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMSRSAETINANI 89
           R  G + F  +    G          +  E+ +   SEW   +D G  +  +   I +  
Sbjct: 89  RNTGKLCFATL--QGGTEGKRIQAMLSLAEVGEESLSEWKSLVDLGDHVFVTGRVIVSR- 145

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRI 148
             G++ +     ++ S A      +   ++  E  R + R+LDL      + +VK R  I
Sbjct: 146 -RGELSIMVTDWKMASKALRPMPVL--HKDLNEETRVRQRYLDLMVREEARELVKKRALI 202

Query: 149 INSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
             ++R  +    +IE  TP+L        AR F             +  A +   +  + 
Sbjct: 203 TRTVRRVLEDHGYIEVETPVLQLVHGGATARPFRTHLNAFD-QPMTMRIATELPLKRAVV 261

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            G +R ++I   FR+E   S   P EF  L+   ++ +Q  +   M+ +++   +     
Sbjct: 262 GGIERVYEIGRVFRNEGVDSTHSP-EFTTLECYETYADQFVMAERMKEIIQSCAKAV-GT 319

Query: 268 NTVSNNFLRICYDDAIRRYG 287
             +      I      +  G
Sbjct: 320 ERIETENGTIDLFGEWKWVG 339



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 16/105 (15%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
               +DL+  G E  +         +  +  +   +     ++          RA + G 
Sbjct: 420 LIEAWDLIIGGMERGTAFSELIDPVIQRERLTAQSLLAAAGDDEAMELDEDFLRALEHGA 479

Query: 534 PPHGGIAAGIDRIVMLLLG------------AKNVREVSLFPMSQ 566
           PP GG+  GIDR++MLL G               +RE  LFP+ +
Sbjct: 480 PPMGGLGLGIDRLIMLLAGDQDPERPGTVVRQPGIRETILFPLMK 524


>gi|255720376|ref|XP_002556468.1| KLTH0H14080p [Lachancea thermotolerans]
 gi|238942434|emb|CAR30606.1| KLTH0H14080p [Lachancea thermotolerans]
          Length = 468

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 106/252 (42%), Gaps = 18/252 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           L GW+  VR    + F+D++D      +           ++ K +R+   L +   +   
Sbjct: 25  LCGWIKSVRLLKKLAFIDLQDGTTPNPLKLVVRRSEDGSDMLKQLRTGQSLMVKDALWKA 84

Query: 81  SAETINANIITGQIELSA--QKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           +     + +   ++E  A  + +++L            ++ +  +       L  R + L
Sbjct: 85  T----PSRLQPFELETDASPECLQVLGQVPASYPLQ--KKHHSLAFLRSNPTLKHRSNYL 138

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV-PSRVN---QGSFYAL 194
              +  R+ + +S+     +++F + S P+LT+   EGA +     S  +   + S++  
Sbjct: 139 GSLLRFRSCVESSLTQFFDSQDFTKVSPPVLTSGDCEGAGELFRAESNAHIARKTSYFGR 198

Query: 195 PQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDIL 250
           P       Q    ++A   +R + + PCFR E+  ++R   EF+ L+ E+ +V     + 
Sbjct: 199 PTYLTVSTQLHLEVLAMALNRVWTLTPCFRAEESDTNRHLAEFWMLETELCYVQNVKGLT 258

Query: 251 NTMENVLRGVFE 262
              E++L+ V E
Sbjct: 259 KVAEHMLKHVVE 270



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 51/138 (36%), Gaps = 25/138 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              +I D+P                PF M Q    +    D ++     +DL+     EI
Sbjct: 352 SPVFITDYP------------RNCKPFYMKQNFDAA----DTVAC----FDLIVPQMGEI 391

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G IR    + ++Q     G+  E ++            G  PHGG   G++R V  L 
Sbjct: 392 IGGSIREDNYDTLIQEMDRRGMKSEDLDWYTSLRLN----GGAPHGGFGLGLERFVSWLF 447

Query: 552 GAKNVREVSLFPMSQNFC 569
           GA+N+R+   F  S    
Sbjct: 448 GAQNIRDAIPFYRSAGGT 465


>gi|302656134|ref|XP_003019823.1| hypothetical protein TRV_06111 [Trichophyton verrucosum HKI 0517]
 gi|291183595|gb|EFE39199.1| hypothetical protein TRV_06111 [Trichophyton verrucosum HKI 0517]
          Length = 563

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 58/279 (20%), Positives = 103/279 (36%), Gaps = 29/279 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFEIAK---SVR 66
           L        + +   V   R     + FL + +    I  V+A  +    ++ K    + 
Sbjct: 97  LSDEHYEKEITVIARVDNARVQSAKLAFLMLRQQGKKIQAVIALKEPLSRQMIKWTGQLN 156

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
              ++ + G+V        +A++    +EL   KI ++S A  +      + E P     
Sbjct: 157 VNSIVQVSGVVKKPEIPVHSASLPN--MELHITKIYMISEAIPMLPMQVKDAERPPPEST 214

Query: 123 ---------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
                            R   R LDL+ +T    +   + +       M+        T 
Sbjct: 215 EEGLVDTDGTPLVTLKTRLDNRILDLQTETSQAIMAISSGVAQLFSEYMLKSGSRWIFTS 274

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            +T ++ EG       S   + ++  L Q+PQ  KQ+ +A      F+I P FR ED  +
Sbjct: 275 KITGAATEGGSGVFEISYFKRKAY--LSQSPQLGKQMCIAGDMMSVFEIGPVFRAEDSNT 332

Query: 228 DRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFS 265
            R   EF  LD E +F     ++L+  EN+L  +  E  
Sbjct: 333 HRHLTEFIGLDFERTFQKHYHEVLDFAENLLVFILSELK 371


>gi|302501169|ref|XP_003012577.1| hypothetical protein ARB_01190 [Arthroderma benhamiae CBS 112371]
 gi|291176136|gb|EFE31937.1| hypothetical protein ARB_01190 [Arthroderma benhamiae CBS 112371]
          Length = 556

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/277 (19%), Positives = 104/277 (37%), Gaps = 32/277 (11%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             +R+ G V  +R      F  I D   +  + A       E A ++     + + G+  
Sbjct: 66  KELRVQGHVRFLRKQKRFAFAHISDGSSLQPIQA---VLTPEQATNLTQGAAVEVTGIWQ 122

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEE------LPLPVFGEREYPESIRFKYRFLD 132
                   ++      EL A K++I+  A+          P+  +   P+ +R     L 
Sbjct: 123 PSPPGKQQSH------ELQATKVDIVGEADPAASSSTQTYPIQKKFHTPDFLRQL-PHLR 175

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFL-------V 182
           LR          R+  I  +     +    NF++   P++T+S  EGA +         V
Sbjct: 176 LRTPFNALLSRLRSEFIYQVTEEFRSHRDLNFVQVQPPLITSSDCEGAGEVFSIRPRDVV 235

Query: 183 PSRVNQGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                   F+  P+    + Q + +   A+     + ++P FR E   + R   EFY L+
Sbjct: 236 IEEGKAVEFFKSPKYLTVSSQLHLE-AYAAELGNVWTLSPTFRAEKSDTPRHLSEFYMLE 294

Query: 239 MEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNF 274
           +EMS+++  + +   +E +LR + +           F
Sbjct: 295 VEMSYMDSLEPLTAFVETLLRNMTQRVYKSPVAQEIF 331



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 41/178 (23%)

Query: 418 NHIAQELGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             +  E  +++        ++ D+P             A  PF M      S +  + ++
Sbjct: 394 LQLEHEKFLVDTIGKGLPIFVTDYP------------KAVKPFYMLPSSGSSNESGETVA 441

Query: 477 IKAFQYDLVCNG-FEIASGGIRNHMSEVMLQAFSNVGISK-----------EVVENRFGG 524
                +DL+     E+  G +R H    +++     G+ K              +  +  
Sbjct: 442 C----FDLLLPEICEVVGGSLREHRLSPLIRNMREHGLLKLKDSTPEPSSAVDAKAPYPH 497

Query: 525 LY------------RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           L                + G  PHGG   G DR V  L G  ++R++  FP      D
Sbjct: 498 LLANEELGSIQWYADLRRWGTVPHGGFGLGFDRFVGYLAGVSSLRDLVPFPRHFGRAD 555


>gi|326474809|gb|EGD98818.1| aspartyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326477798|gb|EGE01808.1| aspartyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 563

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 58/279 (20%), Positives = 103/279 (36%), Gaps = 29/279 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFEIAK---SVR 66
           L        + +   V   R     + FL + +    I  V+A  +    ++ K    + 
Sbjct: 97  LSDEHYEKEITVIARVDNARVQSAKLAFLMLRQQGKKIQAVIALKEPLSRQMIKWTGQLN 156

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
              ++ + G+V        +A++    +EL   KI ++S A  +      + E P     
Sbjct: 157 VNSIVQVSGVVKKPEIPVHSASLPN--MELHITKIYMISEAIPMLPMQVKDAERPPPEST 214

Query: 123 ---------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
                            R   R LDL+ +T    +   + +       M+        T 
Sbjct: 215 EEGLVDTDGTPIVTLKTRLDNRILDLQTETSQAIMAISSGVAQLFSEYMLKSGSRWIFTS 274

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            +T ++ EG       S   + ++  L Q+PQ  KQ+ +A      F+I P FR ED  +
Sbjct: 275 KITGAATEGGSGVFEISYFKRKAY--LSQSPQLGKQMCIAGDMMSVFEIGPVFRAEDSNT 332

Query: 228 DRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFS 265
            R   EF  LD E +F     ++L+  EN+L  +  E  
Sbjct: 333 HRHLTEFIGLDFEKTFQKHYHEVLDFAENLLVFILSELK 371


>gi|198465133|ref|XP_002134918.1| GA23745 [Drosophila pseudoobscura pseudoobscura]
 gi|198150028|gb|EDY73545.1| GA23745 [Drosophila pseudoobscura pseudoobscura]
          Length = 225

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 89/229 (38%), Gaps = 7/229 (3%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           FL +RD  G  Q V             + +E  + + G++ +  +      I  G  EL 
Sbjct: 2   FLTLRDGTGFLQCVLTALLCQTYQGLVLSTESSVVLYGILKAVPSG----KIAPGGHELH 57

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157
               E++ +A           E    ++   R + +R +   K +  R+ ++ + R    
Sbjct: 58  VDYWELIGLAPPGGADAILNEEALPDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRDHYF 117

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
              + E + P L  +  EG           + +F  L Q+ Q Y +  +       F IA
Sbjct: 118 DRGYNEVTPPTLVQTQVEGGSTLFKMQFFGEEAF--LTQSSQLYLETCLP-ALGDVFTIA 174

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
             +R E  R+ R   E+  ++ E  F+  DD+L+ +E+++  V +    
Sbjct: 175 QSYRAEQSRTRRHLAEYTHVEAECPFISYDDLLDRLEDLVCDVVDRVLK 223


>gi|326526343|dbj|BAJ97188.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 550

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 60/326 (18%), Positives = 113/326 (34%), Gaps = 25/326 (7%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRV---RPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
            G L  + VG  V +               + FL++R      Q V    +     A S+
Sbjct: 92  IGHLDRASVGRSVLVRATAQAAYCGSKTKKVAFLELRQGMSTVQCVLAGSAQMALFALSL 151

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER------- 118
             E V+ ++G V           +   ++E+  +K+  +S A+        +        
Sbjct: 152 PKESVVFVEGAVALLDKPLRYTTV--QEVEIQVRKLYCVSRAKPKLPISVEDAGRSSEEF 209

Query: 119 -----------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
                         +  R  +  ++LR   +      + +I +  R  + + +FI   TP
Sbjct: 210 AMAEANGVQLPRVGQDTRLNHPAINLRTPAVQAIFRIKHQIEHKFREYLSSRDFIGIHTP 269

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            L + S EG          N G    L Q+PQ +KQ+ +  G  R F++   FR ED  +
Sbjct: 270 KLISGSSEGGAAVFKLEYKN-GKTACLAQSPQLHKQMAICGGLRRVFEVGHIFRAEDSNT 328

Query: 228 DRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
            R   EF  +D EM  +    ++ + ++     +F   +     +   +   Y     +Y
Sbjct: 329 HRHLCEFVGMDAEMEIMRHYFEVCDIVDGFFVELFRHLNENCRTALEAVNRQYPFEPLKY 388

Query: 287 GTDKPDLRNPIIMHNVTEHFVHSEFR 312
             +   L     +  + E     E  
Sbjct: 389 LENTLRLSYEEGIQMLKEAGTEVEPM 414



 Score =  107 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 27/183 (14%)

Query: 390 RLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE 449
           RL  ++G      AG          D      ++LG +    ++     DF F  +    
Sbjct: 394 RLSYEEGIQMLKEAGTE---VEPMGDLNTEAERKLGQLVREKYD----TDF-FILY---- 441

Query: 450 KKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
            +   A  PF TMP     +          +  +D+   G EI SG  R H  E++ +  
Sbjct: 442 -RYPLAARPFYTMPCYENPAY---------SNSFDVFLRGEEIISGAQRIHEPELLAKRV 491

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           +  GI K  +++       +F  G PPHGG   G++R+V L  G  ++R  SLFP     
Sbjct: 492 AEHGIDKNSIKS----YLESFSYGTPPHGGFGIGLERVVKLFCGLDDIRMASLFPRDPQR 547

Query: 569 CDL 571
              
Sbjct: 548 LSP 550


>gi|310791083|gb|EFQ26612.1| aspartyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 584

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 68/395 (17%), Positives = 125/395 (31%), Gaps = 60/395 (15%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH-----YGITQVVANPDSACFEIAK-- 63
           +G   VG  ++L  W+   R  G  + F+++R+       G+    A       ++ K  
Sbjct: 96  IGAEHVGKAIKLRAWIQNSRMQGAKMCFIELREERNWAIQGVIAASAEGKPVSKQMVKWI 155

Query: 64  -SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL---------SVAEELPLP 113
            S+  E  + ++  V        +  +     EL   K+ ++         S+A      
Sbjct: 156 GSIALESYVLVEATVQKPLEPVKSCKVS--DFELHITKLYVIAPGPEALGMSLAVSNRPI 213

Query: 114 VFGEREYP----------------------------ESIRFKYRFLDLRRDTLHKNIVKR 145
              + E P                             S       +  R          R
Sbjct: 214 NSFDDEDPNAPEADKPVDDVKAGVEGVSIDTTPSASMSTHLNNPVMHKRAPVQQAIADIR 273

Query: 146 TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
                     + A+ F++   P L  ++ EG  +       ++ +   L Q+PQ YKQ  
Sbjct: 274 MATRKLFAEYLDAQGFVQFEPPCLIGAASEGGANVFQLPYFDKSA--CLAQSPQFYKQFE 331

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEF 264
           +A G  R + I P FR E+  + R   EF  LD+EM    +  ++ + +E VL  +F   
Sbjct: 332 IAGGRKRVYCIGPVFRAENSNTPRHMTEFTGLDLEMEIEDDYHEVQDMLEKVLLHIFRGL 391

Query: 265 SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
                 + + +R  Y            ++R  +      +         +  + S     
Sbjct: 392 KERCADAIDTVRAVYPSEDFLLPEPGKEVR--LTFAEGQKLLREEGPEEYRNV-SDEEDM 448

Query: 325 EVWAIPAKGGGGNRAF------CDRMNEWARSQGQ 353
                 A G    + F       D+  E AR    
Sbjct: 449 STPQEKALGALIRKKFNTDFYVLDKFPEGARPFYA 483



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 50/148 (33%), Gaps = 21/148 (14%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG +    F      DF   +   E  +      PF   +                  
Sbjct: 454 KALGALIRKKFN----TDFYVLDKFPEGAR------PFYALED--------PENPKVTNA 495

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           YD    G EI SGG R H+  V+       GI               F+  G+PPHGG  
Sbjct: 496 YDFFMRGQEILSGGQRIHIPSVLEARLRKKGIDPNS--QGIKEYVDVFRSAGVPPHGGGG 553

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G+DR+V   L   +V   S +P +   
Sbjct: 554 IGLDRVVAWFLNLPSVHLASYYPRTPKR 581


>gi|50303123|ref|XP_451499.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640630|emb|CAH03087.1| KLLA0A11484p [Kluyveromyces lactis]
          Length = 474

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 68/331 (20%), Positives = 134/331 (40%), Gaps = 20/331 (6%)

Query: 11  DLGVSDVGSFVR---LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           +   ++ G+ V+   +SGWV  VRP   I F++I+D   +  +            K    
Sbjct: 43  ETARTNGGTPVKIDQVSGWVKNVRPLKTITFVEIQDGTTLQDLTVVLKQGAPS-FKPSLG 101

Query: 68  EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
           + V  +   ++ R  +      +   ++L    +E          PV  ++    ++R  
Sbjct: 102 QSVTVLHPEIVQRKNQQFETLCMPENLKLIGPTVE---------YPVQNKQTSLPTLRKL 152

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
             F   R   L   +  R ++ + +   +   +F     PILT+   EGA +     + +
Sbjct: 153 PEFKH-RTTYLSNLLRFRHKVESQLTKTLDGLDFTMVRPPILTSIDCEGAGEMFNLKQDH 211

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
                 L  + Q + ++LM  G  R + + PCFR E   ++R   EF+ L++E SFV+++
Sbjct: 212 WDEIVNLTVSSQLHLEVLM-MGLGRVYCLQPCFRAEKSDTNRHLCEFWMLEVEASFVDKN 270

Query: 248 D-ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
           + +++ +E +++ V    S    +   F   C  D   R+     D +  I   +  E  
Sbjct: 271 ESLMDLVELMVKSVVLSLSETKDLPKYFPVGCNIDITSRWAKLLQDWKR-ITYTDAVEAL 329

Query: 307 VHSEFRVFSKIL---SVNPGYEVWAIPAKGG 334
           + S  +    +     +N  +E W     GG
Sbjct: 330 LSSGVKFEHDLAWGKDLNSEHERWLCDHFGG 360



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 5/99 (5%)

Query: 474 LLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                   +DL+     EI  G +R    + + Q      +      N+        + G
Sbjct: 380 PDGTTVECFDLLFPEIGEIVGGSVREDDYDTLKQEIERRDM----ASNQLDWYLNLRKEG 435

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             PHGG   GI+R+V  L G  N+R+   F  +    DL
Sbjct: 436 TVPHGGFGIGIERLVSYLYGNPNIRDSIPFHRTAGQIDL 474


>gi|302331589|gb|ADL21783.1| lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 1083

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 63/289 (21%), Positives = 115/289 (39%), Gaps = 24/289 (8%)

Query: 1   MHRY-----RTHSCGDLGVSDVGSFVR-----LSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           M  Y     RT S  +L  +D    V      ++G V  +R HGG++F D+ + +   Q+
Sbjct: 617 MSPYPPAVPRTTSIKELLAADATHTVSEAPISVTGRVAFIRDHGGVVFADLVEEHTKLQL 676

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
           V    +      +++     L   G ++S + +   +   T    L     ++ + +   
Sbjct: 677 VIERSA-----GQTMTLFKHLVSRGDLISATGQLGESRNGTR--SLIVSSWDMAAKSLTP 729

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
              V         +R K+R +D   +       + R++ ++++R  +  + ++E  TPIL
Sbjct: 730 MPRVP---LSNPHLRAKFRHMDFALNKKATDIFLARSKAVSAVRSVLQEQGYMEAETPIL 786

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T      AR F    R    +   L  AP+ Y + L+  G  R F+I   FR+E   S 
Sbjct: 787 QTIHGGANARPFRTHIRAYDQNL-TLRIAPELYLKRLVVGGIPRVFEIGRNFRNEGVDST 845

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
             P EF  L+   S+   D +    E ++R           V+    +I
Sbjct: 846 HNP-EFTSLEAYQSYGNWDTMRVLTEELIRSAAIAVYGKPEVTTADGQI 893



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 43/173 (24%), Positives = 60/173 (34%), Gaps = 28/173 (16%)

Query: 402  IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
            IA       +   D  N +  EL  I  N     +   FP               +P TM
Sbjct: 929  IAEKYGITAATVGDLVNELYDEL--IEPNTVFPTFYAGFP------------VETSPLTM 974

Query: 462  PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEV 517
                   +         A ++DLV  G E+ +               S+  +        
Sbjct: 975  ADPDQPRI---------AQRWDLVACGMELGTAYTELADPLEQYARLSDQSLRAAGGDAE 1025

Query: 518  VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                     +A Q GMPP GG+  GIDR+VM L G +N+REV  FP  +   D
Sbjct: 1026 AMELDENFLKALQFGMPPTGGLGIGIDRLVMFLTG-QNIREVLSFPFVRPDTD 1077


>gi|302207030|gb|ADL11372.1| Lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
          Length = 1111

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 63/289 (21%), Positives = 115/289 (39%), Gaps = 24/289 (8%)

Query: 1   MHRY-----RTHSCGDLGVSDVGSFVR-----LSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           M  Y     RT S  +L  +D    V      ++G V  +R HGG++F D+ + +   Q+
Sbjct: 645 MSPYPPAVPRTTSIKELLAADATHTVSEAPISVTGRVAFIRDHGGVVFADLVEEHTKLQL 704

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
           V    +      +++     L   G ++S + +   +   T    L     ++ + +   
Sbjct: 705 VIERSA-----GQTMTLFKHLVSRGDLISATGQLGESRNGTR--SLIVSSWDMAAKSLTP 757

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
              V         +R K+R +D   +       + R++ ++++R  +  + ++E  TPIL
Sbjct: 758 MPRVP---LSNPHLRAKFRHMDFALNKKATDIFLARSKAVSAVRSVLQEQGYMEAETPIL 814

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T      AR F    R    +   L  AP+ Y + L+  G  R F+I   FR+E   S 
Sbjct: 815 QTIHGGANARPFRTHIRAYDQNL-TLRIAPELYLKRLVVGGIPRVFEIGRNFRNEGVDST 873

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
             P EF  L+   S+   D +    E ++R           V+    +I
Sbjct: 874 HNP-EFTSLEAYQSYGNWDTMRVLTEELIRSAAIAVYGKPEVTTADGQI 921



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 43/173 (24%), Positives = 60/173 (34%), Gaps = 28/173 (16%)

Query: 402  IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
            IA       +   D  N +  EL  I  N     +   FP               +P TM
Sbjct: 957  IAEKYGITAATVGDLVNELYDEL--IEPNTVFPTFYAGFP------------VETSPLTM 1002

Query: 462  PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEV 517
                   +         A ++DLV  G E+ +               S+  +        
Sbjct: 1003 ADPDQPRI---------AQRWDLVACGMELGTAYTELADPLEQYARLSDQSLRAAGGDAE 1053

Query: 518  VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                     +A Q GMPP GG+  GIDR+VM L G +N+REV  FP  +   D
Sbjct: 1054 AMELDENFLKALQFGMPPTGGLGIGIDRLVMFLTG-QNIREVLSFPFVRPDTD 1105


>gi|300859348|ref|YP_003784331.1| lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686802|gb|ADK29724.1| lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|308277282|gb|ADO27181.1| lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 1083

 Score =  135 bits (339), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 63/289 (21%), Positives = 115/289 (39%), Gaps = 24/289 (8%)

Query: 1   MHRY-----RTHSCGDLGVSDVGSFVR-----LSGWVHRVRPHGGIIFLDIRDHYGITQV 50
           M  Y     RT S  +L  +D    V      ++G V  +R HGG++F D+ + +   Q+
Sbjct: 617 MSPYPPAVPRTTSIKELLAADATHTVSEAPISVTGRVAFIRDHGGVVFADLVEEHTKLQL 676

Query: 51  VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEEL 110
           V    +      +++     L   G ++S + +   +   T    L     ++ + +   
Sbjct: 677 VIERSA-----GQTMTLFKHLVSRGDLISATGQLGESRNGTR--SLIVSSWDMAAKSLTP 729

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
              V         +R K+R +D   +       + R++ ++++R  +  + ++E  TPIL
Sbjct: 730 MPRVP---LSNPHLRAKFRHMDFALNKKATDIFLARSKAVSAVRSVLQEQGYMEAETPIL 786

Query: 170 -TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
            T      AR F    R    +   L  AP+ Y + L+  G  R F+I   FR+E   S 
Sbjct: 787 QTIHGGANARPFRTHIRAYDQNL-TLRIAPELYLKRLVVGGIPRVFEIGRNFRNEGVDST 845

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
             P EF  L+   S+   D +    E ++R           V+    +I
Sbjct: 846 HNP-EFTSLEAYQSYGNWDTMRVLTEELIRSAAIAVYGKPEVTTADGQI 893



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 43/173 (24%), Positives = 60/173 (34%), Gaps = 28/173 (16%)

Query: 402  IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
            IA       +   D  N +  EL  I  N     +   FP               +P TM
Sbjct: 929  IAEKYGITAATVGDLVNELYDEL--IEPNTVFPTFYAGFP------------VETSPLTM 974

Query: 462  PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEV 517
                   +         A ++DLV  G E+ +               S+  +        
Sbjct: 975  ADPDQPRI---------AQRWDLVACGMELGTAYTELADPLEQYARLSDQSLRAAGGDAE 1025

Query: 518  VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                     +A Q GMPP GG+  GIDR+VM L G +N+REV  FP  +   D
Sbjct: 1026 AMELDENFLKALQFGMPPTGGLGIGIDRLVMFLTG-QNIREVLSFPFVRPDTD 1077


>gi|18252211|gb|AAL61938.1| aspartate--tRNA ligase - like protein [Arabidopsis thaliana]
 gi|27311923|gb|AAO00927.1| aspartate--tRNA ligase - like protein [Arabidopsis thaliana]
          Length = 405

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 49/231 (21%), Positives = 86/231 (37%), Gaps = 24/231 (10%)

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA------------ 107
           +  K +  E  + + G+V             T Q+E+  +K+  ++ +            
Sbjct: 3   KYLKQLSRESFVDVIGVVTLPKEPLTGT---TQQVEIQVRKVYCINKSLAKLPLSVEDAA 59

Query: 108 ------EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENF 161
                 E             +  R  YR LDLR          +  +  + R ++  +NF
Sbjct: 60  RSEADIEASLQTPSPAARVNQDTRLNYRVLDLRTPANQAIFQLQYEVEYAFREKLRFKNF 119

Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           +   TP L A S EG           +G    L Q+PQ +KQ+ +     R F++ P FR
Sbjct: 120 VGIHTPKLMAGSSEGGSAVFRLEY--KGQPACLAQSPQLHKQMAICGDLRRVFEVGPVFR 177

Query: 222 DEDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVS 271
            ED  + R   EF  LD+EM       +I++ ++ +   +F   +      
Sbjct: 178 AEDSFTHRHLCEFVGLDVEMEIRKHYSEIMDLVDELFVFIFTSLNERCKKE 228



 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 78/234 (33%), Gaps = 28/234 (11%)

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           R     + +           +IF  L+E      +  V K       + +   L +   +
Sbjct: 200 RKHYSEIMDLVDELF----VFIFTSLNERCK-KELQAVGKQYPFEPLKFLPKTLRLTFEE 254

Query: 398 SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN 457
               +    ++      D      ++LG +    +      +F          +   A  
Sbjct: 255 GVQMLKEAGVEV-DPLGDLNTESERKLGQLVLEKYN----TEFYILH------RYPKAVR 303

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           PF         L         +  +D+   G EI SG  R H+ EV+ Q     GI  + 
Sbjct: 304 PFYTMTCADNPL--------YSNSFDVFIRGEEIISGAQRVHIPEVLEQRAGECGIDVKT 355

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +         +F+ G P HGG   G++R+VML     N+R+ SLFP        
Sbjct: 356 IST----YIDSFRYGAPLHGGFGVGLERVVMLFCALNNIRKTSLFPRDPQRLSP 405


>gi|302497507|ref|XP_003010754.1| hypothetical protein ARB_03456 [Arthroderma benhamiae CBS 112371]
 gi|291174297|gb|EFE30114.1| hypothetical protein ARB_03456 [Arthroderma benhamiae CBS 112371]
          Length = 575

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 60/296 (20%), Positives = 107/296 (36%), Gaps = 29/296 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFEIAK---SVR 66
           L        + +   V   R     + FL + +    I  V+A  +    ++ K    + 
Sbjct: 97  LSDEHYEKEITVIARVDNARVQSAKLAFLMLRQQGKKIQAVIALKEPLSRQMIKWTGQLN 156

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
              ++ + G+V        +A++    +EL   KI ++S A  +      + E P     
Sbjct: 157 VNSIVQVSGVVKKPEIPVHSASLPN--MELHITKIYMISEAIPMLPMQVKDAERPPPEST 214

Query: 123 ---------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
                            R   R LDL+ +T    +   + +       M+        T 
Sbjct: 215 EEGLVDTDGTPIVTLKTRLDNRILDLQTETSQAIMAISSGVAQLFSEYMLKSGSRWIFTS 274

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            +T ++ EG       S   + ++  L Q+PQ  KQ+ +A      F+I P FR ED  +
Sbjct: 275 KITGAATEGGSGVFEISYFKRKAY--LSQSPQLGKQMCIAGDMMSVFEIGPVFRAEDSNT 332

Query: 228 DRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
            R   EF  LD E +F     ++L+  EN+L  +  E           ++  Y  A
Sbjct: 333 HRHLTEFIGLDFERTFQKHYHEVLDFAENLLVFILSELKARFKDEIAVVQKSYPKA 388


>gi|269859615|ref|XP_002649532.1| aspartyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|263511703|sp|B7XHQ4|SYDC_ENTBH RecName: Full=Probable aspartyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Aspartate--tRNA ligase; Short=AspRS
 gi|220067083|gb|EED44551.1| aspartyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 474

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 65/293 (22%), Positives = 112/293 (38%), Gaps = 22/293 (7%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC-----FEIAKSVR 66
           L  +  G+ +R+ G++  +      IF+ +RD     Q +    +       F   K + 
Sbjct: 25  LTDNMNGTVIRIRGFIESITSCSSQIFILLRDRLEKVQCIIFKSTNVSSIYEFSRLKKLP 84

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE------- 119
            E  + I+G V+   AE          IE+    + IL            + +       
Sbjct: 85  LESFIEIEGQVVF--AEIPIKRATKQNIEIVISTLNILGPVVSKLPFQLKDCKIAGKESD 142

Query: 120 -----YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                   ++R   RFLD R       I    + + + R  +    FIE  T  +  S  
Sbjct: 143 TNTITVGYNLRLDNRFLDFRLPVTQSIIKIIDQTMYTFRTYLRTHEFIEIKTSKIIQSGS 202

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EG  +    +  N+ ++ A  Q+PQ YKQL +  G  R ++I   +R E    +R   EF
Sbjct: 203 EGGANLFSLNYFNKPAYLA--QSPQLYKQLAIIGGLKRVYEIGHVYRAEVSNINRYLSEF 260

Query: 235 YQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
             LD+EM       D ++ + ++   +FE F N        +R  Y+    +Y
Sbjct: 261 VGLDIEMEMETTYIDFIHFLHSLFINIFESFKNEMKKELEIIRQYYEFVDLKY 313



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 4/96 (4%)

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D  +     YD +  G EI SG  R +  + +  A  + G++             AF+ G
Sbjct: 380 DETTKLTRSYDFIVRGEEILSGAQRENRYDYLKNAVIDKGLNP----ENLKNYLEAFKYG 435

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            PPH G   G++R +    G  ++R  SLFP   N 
Sbjct: 436 APPHIGCGIGLERFLKAYFGFDDIRYFSLFPRDPNR 471


>gi|289811373|ref|ZP_06542002.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 142

 Score =  134 bits (338), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 68/143 (47%), Positives = 95/143 (66%), Gaps = 3/143 (2%)

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           +LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+
Sbjct: 1   YLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDV 59

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E SF+    +   ME ++R ++ E    +    +F  + + +A RRYG+DKPDLRNP+ +
Sbjct: 60  ETSFMTAPQVREVMEALVRHLWLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMEL 117

Query: 300 HNVTEHFVHSEFRVFSKILSVNP 322
            +V +     EF VF+   +   
Sbjct: 118 VDVADLLKSVEFAVFAGPANDPK 140


>gi|85057951|ref|YP_456867.1| asparaginyl-tRNA synthetase [Aster yellows witches'-broom
           phytoplasma AYWB]
 gi|123766348|sp|Q2NIF5|SYN_AYWBP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|84790056|gb|ABC65788.1| aspartyl/asparaginyl-tRNA synthetase [Aster yellows witches'-broom
           phytoplasma AYWB]
          Length = 503

 Score =  134 bits (337), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 54/309 (17%), Positives = 101/309 (32%), Gaps = 54/309 (17%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---------NPDSACFEIAKSVRSEW 69
             + L+GWV   R    +IF+D+ D   +  +             D   F+  +   +  
Sbjct: 18  KKILLNGWVRNCRYQKKLIFIDLNDGTFLENLQIVCKEIKNIETADINEFQENQKFNNNN 77

Query: 70  V------------LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
                        +   G  +         N +    E+SAQ I +L  ++    P+  +
Sbjct: 78  KSSNNINLEKLKEILQIGASLQVEGILKATNNLKTPFEISAQNISLLGTSD-FSYPLQPK 136

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           +     +R +   L +R          R     ++      + F   +TPI+T +  EG 
Sbjct: 137 KHSKVFLR-QISHLRVRTKLFGAVFRIRNTAFFALHSFFQKKGFFHINTPIITPNDGEGV 195

Query: 178 RDFLVPSRVN----------------------------QGSFYAL---PQAPQQYKQLLM 206
            +    + +N                            +  F+          Q +   M
Sbjct: 196 GELFQITTLNLEVLPQTKNIPNAFKPVNENTSKKGIDYKKDFFGKKVFLTVTGQLEAEAM 255

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           A G ++ +   P FR E   + R   EF+ L+ EM+F +    L   + +L+ V  +   
Sbjct: 256 ALGLNKVYTFGPTFRSEKSNTTRHAAEFWMLEPEMAFCDLSQNLKVAQEMLQFVISKCLE 315

Query: 267 GNTVSNNFL 275
            N     FL
Sbjct: 316 QNYQDIEFL 324



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 24/140 (17%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           +   +  +  +I+D+P     +E K     +NP        +++   DL         L 
Sbjct: 382 LTEKHFKKPVFIVDWP-----KEIKAFYMKNNP------DQKTVAAMDL---------LF 421

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
               E+  G  R     V+++  + + IS++ +E          + G   H G   G +R
Sbjct: 422 PRVGELIGGSQREENLSVLIEKMNQMKISQKDLE----WYLDLRRFGGCIHSGFGLGFER 477

Query: 546 IVMLLLGAKNVREVSLFPMS 565
           +++ L G  N+R+V  FP +
Sbjct: 478 LLIFLTGLDNIRDVIAFPRT 497


>gi|302661817|ref|XP_003022571.1| hypothetical protein TRV_03310 [Trichophyton verrucosum HKI 0517]
 gi|291186524|gb|EFE41953.1| hypothetical protein TRV_03310 [Trichophyton verrucosum HKI 0517]
          Length = 549

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 54/277 (19%), Positives = 103/277 (37%), Gaps = 32/277 (11%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             +R+ G V  +R      F  I D   +  + A       E A ++     + + G+  
Sbjct: 59  KELRVQGHVRFLRKQKRFAFAHISDGSSLQPIQA---VLTPEQATNLTQGAAVEVTGIWQ 115

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEE------LPLPVFGEREYPESIRFKYRFLD 132
                   ++      EL A K++I+  A+          P+  +   P+ +R     L 
Sbjct: 116 PSPPGKQQSH------ELQATKVDIVGEADPAASSSTQTYPIQKKFHTPDFLRQL-PHLR 168

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFL-------V 182
           LR          R+  I  +     +    NF++   P++T+S  EGA +         V
Sbjct: 169 LRTPFNALLSRLRSEFIYQVTEEFRSHRHLNFVQVQPPLITSSDCEGAGEVFSIRPRDVV 228

Query: 183 PSRVNQGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                   F+  P+    + Q + +   A+     + ++P FR E   + R   EFY L+
Sbjct: 229 IEEGKAVEFFKSPKYLTVSSQLHLE-AYAAELGNVWTLSPTFRAEKSDTPRHLSEFYMLE 287

Query: 239 MEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNF 274
            EMS+++  + +   +E +LR + +           F
Sbjct: 288 AEMSYMDSLEPLTAFVETLLRNMTQRVYKSPVAQELF 324



 Score = 64.3 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 58/178 (32%), Gaps = 41/178 (23%)

Query: 418 NHIAQELGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             +  E  +++        ++ D+P             A  PF M      S +  + ++
Sbjct: 387 LQLEHEKFLVDTIGKGLPIFVTDYP------------KAVKPFYMLPSSGSSDESGETVA 434

Query: 477 IKAFQYDLVCNG-FEIASGGIRNHMSEVMLQAFSNVGISK-----------EVVENRFGG 524
                +DL+     E+  G +R H    ++Q     G+ K              +  +  
Sbjct: 435 C----FDLLLPEICEVVGGSLREHRLSPLIQNMREHGLLKLKDSTPEPSSTVDAKAPYPH 490

Query: 525 LY------------RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           L                + G  PHGG   G DR V  L G  ++R++  FP      D
Sbjct: 491 LLANEELGSIQWYADLRRWGTVPHGGFGLGFDRFVGYLAGVSSLRDLVPFPRHFGRAD 548


>gi|23006060|ref|ZP_00048561.1| COG0173: Aspartyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 192

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 61/107 (57%), Positives = 78/107 (72%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           MHRYRTH+CG L  SDVG  VRLSGW HR+R HGG++F+D+RDHYG+TQ V + DS  F+
Sbjct: 1   MHRYRTHTCGALRPSDVGGEVRLSGWCHRIRDHGGVLFIDLRDHYGLTQCVIDSDSKAFK 60

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
            A++VRSEWV+ IDG V +R A T NA + TG  E+    +E+L  A
Sbjct: 61  EAEAVRSEWVIRIDGRVRTRPAGTENAELPTGADEVYIDDLEVLGPA 107


>gi|330916413|ref|XP_003297410.1| hypothetical protein PTT_07805 [Pyrenophora teres f. teres 0-1]
 gi|311329920|gb|EFQ94492.1| hypothetical protein PTT_07805 [Pyrenophora teres f. teres 0-1]
          Length = 799

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 97/246 (39%), Gaps = 32/246 (13%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  + ++G+V  VR    I F  I D   +  V A       ++A+ + +   + + G  
Sbjct: 69  GETLTINGYVRTVRKQKRIAFAAIGDGSTLQTVQA---VLAPQLAEGLSTGVAVTVTGKW 125

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
           +    +  +        EL   K+ IL   +    P+  + +  E +R     L  R   
Sbjct: 126 IPSPGQGQSH-------ELQVNKVRILGENDAAAYPIQKKYQTAEFLRTL-PHLRSRLPF 177

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP-------------- 183
               +  R+ +   +       +F++C  PI+T+S  EGA +                  
Sbjct: 178 NSLILRLRSLVTAEVTRYFAKHDFVQCHPPIITSSDCEGAGEVFTVAPGAPAIPDTQLSN 237

Query: 184 --SRVNQGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
             ++ +   F+  P+    + Q + + L A   ++ + ++P FR E   + R   EFY L
Sbjct: 238 HQAKQHDDQFFGSPKYLTVSSQLHLEAL-AQSVNKVWALSPTFRAEKSDTARHLSEFYML 296

Query: 238 DMEMSF 243
           + E++F
Sbjct: 297 EAELAF 302


>gi|149210307|ref|XP_001522528.1| hypothetical protein MGCH7_ch7g631 [Magnaporthe oryzae 70-15]
 gi|86196586|gb|EAQ71224.1| hypothetical protein MGCH7_ch7g631 [Magnaporthe oryzae 70-15]
          Length = 1454

 Score =  134 bits (337), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 102/585 (17%), Positives = 170/585 (29%), Gaps = 145/585 (24%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHY-----GITQVVANPDSACFEIAKS 64
           +LG + V   V L  ++   R  G  + F+++R+       GI    A       ++ K 
Sbjct: 93  ELGEAQVDKTVHLFAFMQNSRMQGAKMAFVELREKGTWAIQGIVAASAEGKPVSKQMVKW 152

Query: 65  VRSEWV---LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE------------ 109
           V S  V   + ++G+V        +  +     EL   +   +S   +            
Sbjct: 153 VGSLSVEAWVLVEGVVKKAPEPVKSVRVS--GYELHISRFYCISPGPQQLGLTLAAANNG 210

Query: 110 LPLPVFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
                    E P         LD      R          R       R  +    F E 
Sbjct: 211 FSNEDAAPEEGPVVTASLNTHLDYFVISKRSAVRSAVADVRETTKELFRSYLKERGFHEF 270

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            +P +  ++ EG  +       ++  F A  Q+PQ YKQ  +A G  R F          
Sbjct: 271 ESPCIIEAASEGGANVFSADYFDKKVFLA--QSPQFYKQYEIAGGRQRVFC--------- 319

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIR 284
                                       +  V R    E SN       F  +  +  I+
Sbjct: 320 ----------------------------IGPVFRA---ENSNTPRHMTEFTGLDMEMVIK 348

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            +  +  D+   + +H   E       ++  + +      E +A+P  G      F    
Sbjct: 349 WHYHEVRDMLEGVFLHIFRELKKQCAEQI--ETVRSVFPAEDFALPEPGKEVRLTF---- 402

Query: 345 NEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG 404
                ++GQ  L        E G            N+ + E +    +   G+       
Sbjct: 403 -----AEGQKLL-------REEGPEE-------FRNVSDFEDMSTPQEKALGEII----- 438

Query: 405 DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQG 464
                       R     +  +++           FP           + A   +T    
Sbjct: 439 ------------RRKFGTDFYVLDK----------FP-----------ESARPFYTCEDP 465

Query: 465 GMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
               L            YD    G EI SGG R H  E +       G+          G
Sbjct: 466 ENREL---------TNAYDFFMRGQEIMSGGQRIHKPEEIEARMRRKGLDPNS--KGLKG 514

Query: 525 LYRAFQC-GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
               F+  G+PPHGG   G+DR+V   L    V+  + +P + N 
Sbjct: 515 YVNTFRQAGVPPHGGGGIGLDRVVQFFLNLSTVQYAAFYPRTPNR 559


>gi|119492003|ref|XP_001263496.1| asparaginyl-tRNA synthetase Slm5, putative [Neosartorya fischeri
           NRRL 181]
 gi|119411656|gb|EAW21599.1| asparaginyl-tRNA synthetase Slm5, putative [Neosartorya fischeri
           NRRL 181]
          Length = 549

 Score =  134 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 108/279 (38%), Gaps = 34/279 (12%)

Query: 9   CGD-LGVSDVG------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           C + L  S  G        ++++G+V  VR      F +I D   I  + A    A    
Sbjct: 31  CAEVLRKSQAGSSSYENQEIKINGFVRSVRKQKRFAFAEITDGSTIEPLQAFLKPA---Q 87

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  + +   + I GL  +       ++      EL   +++++  AE    P+  +   P
Sbjct: 88  AAELSTGTAVEISGLWKACPPGKEQSH------ELQTTEVKVVGQAEPETYPIQKKYHSP 141

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN---FIECSTPILTASSPEGAR 178
           + +R     L LR          R+  +  +           +++   P++T+S  EGA 
Sbjct: 142 DFLR-SIPHLRLRTPFNSVLSRFRSECLYQLGNVFRDAPTGGYVQVQPPLITSSDCEGAG 200

Query: 179 DFLVP--------SRVNQGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           +             +     F+  P+    + Q + +   A+     + I+P FR E   
Sbjct: 201 ETFTVLPRETIMDPKSEGNHFFRAPKYLTVSSQLHLE-AYAAELGNVWAISPTFRAEKSD 259

Query: 227 SDRLPGEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEF 264
           + R   EFY L+ EM+F++  D + + +E V+R +    
Sbjct: 260 TPRHLSEFYMLEAEMNFMDDLDSLTDAVEYVVRDLTRRL 298



 Score = 70.5 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 49/171 (28%), Gaps = 46/171 (26%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND---LLSIKAFQYDLVCNGF 489
           +  ++ D+P             A  PF M    +   K  D        A  +DL+    
Sbjct: 391 QPVFVTDYP------------KAIKPFYMAPSHVAPGKEEDFRAPGETVAC-FDLLLPEV 437

Query: 490 -EIASGGIRNHM-SEVMLQAFSN----------------------------VGISKEVVE 519
            E+A G +R H    ++     +                              +      
Sbjct: 438 SEVAGGSLREHRLPNIIQNMRDHGLIKERLYPASGAGETPTTQTAPEQPLYPHLQPYEDL 497

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                     + G  PHGG   G DR +  L G  +VR+V  FP      D
Sbjct: 498 GHLQWYADLRRWGSAPHGGFGLGFDRFLSYLAGVSSVRDVVAFPRYFGRAD 548


>gi|82596159|ref|XP_726146.1| lysyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23481432|gb|EAA17711.1| lysyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 644

 Score =  134 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 60/306 (19%), Positives = 120/306 (39%), Gaps = 58/306 (18%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA-------------------- 52
           G   +     + G V   R +G  +FL+I+D  G+ Q+                      
Sbjct: 109 GEHYIDQVYVVYGRVMAKRNNG--MFLNIQDDVGMIQIYLDNNIMLNQTNISTQDKNLLN 166

Query: 53  ------------------------------NPDSACFEIAKSVRSEWVLCIDGLVMSRSA 82
                                         NP +   +  K+ +      I  +    + 
Sbjct: 167 NPKQNQMEKSYCEENLQNYLDQSDDSKSNENPHNEELDEYKNTQEISARKIIEVGDFVAV 226

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLHKN 141
           +      + G++ L  + I IL+ A  LPLP   +       +++ R+LD L  +   + 
Sbjct: 227 KGYIRKSLRGELTLHTKNIYILTKAL-LPLPDKHKGMKDIEYKYRKRYLDFLTNNEQKEK 285

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           I+ R  II  +R  ++ + ++E  TP+L   +    A+ F    +      Y L  AP+ 
Sbjct: 286 IITRFNIIQEVRRFLLKKKYLEVDTPMLQLVAGGASAKPFETHLKSLDLVLY-LRIAPEL 344

Query: 201 YKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
           + + L+ SG  ++ F+++ CFR+E   +   P EF  L++  S+     ++   + +++ 
Sbjct: 345 FLKKLIISGISEKIFELSKCFRNEGLSTIHNP-EFTMLEIYKSYANYKYMMKFTKKLIKN 403

Query: 260 VFEEFS 265
           V ++FS
Sbjct: 404 VAKKFS 409



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            ++ ++       +K            A   G+PP GG+  GIDR+ MLL  + +++ + 
Sbjct: 577 KDIDIKKKYIFKHTKNENHEIDYDYITALAHGLPPTGGLGIGIDRLCMLLTNSSSIKNIL 636

Query: 561 LFP 563
            FP
Sbjct: 637 PFP 639


>gi|112832|sp|P10723|SYNC_BRUMA RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS; AltName:
           Full=Potentially protective 63 kDa antigen
 gi|156057|gb|AAA27852.1| 63 kd antigen [Brugia malayi]
          Length = 548

 Score =  134 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 66/390 (16%), Positives = 118/390 (30%), Gaps = 25/390 (6%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
                 V + GW+HR+R  G  ++F  +RD  G  QV+          A +V +E  + I
Sbjct: 121 KHRNERVCIKGWIHRMRRQGKSLMFFILRDGTGFLQVLLMDKLCQTYDALTVNTECTVEI 180

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +                 EL A   +I+  A    +      E         R L +
Sbjct: 181 YGAIKEVPEG----KEAPNGHELIADFWKIIGNAPPGGIDNVLNEEASVDKMLDNRHLVI 236

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +     +  R     +MR       ++E + P L  +  EG           + SF  
Sbjct: 237 RGENAAALLRLRAAATRAMREHFYNAGYLEVAPPTLVQTQVEGGSTLFNLDYFGEQSF-- 294

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  + +     F      +           E+  ++ E  F+  DD++  +
Sbjct: 295 LTQSSQLYLETCIPT-LGDVFLHCSVLQGGKISHSSTLAEYAHVEAECPFITLDDLMEKI 353

Query: 254 ENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E ++    +                         FLR+ Y DAI+       +       
Sbjct: 354 EELVCDTVDRLLADEEAKKLLEHINPKFQPPERPFLRMEYKDAIKWLQEHNVENEFGNTF 413

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR-AFCDRMNEWARSQGQPGLAY 358
               E    +  R  +  ++       +    K     R A  + + E       PG+  
Sbjct: 414 T-YGEDIAEAAERFMTDTINKPILLNRFPSEIKAFYMQRDAQDNTLTESVDLL-MPGVGE 471

Query: 359 IFWRLDESGNVAGMGPVAKHLNIVNTEAIR 388
           I            +    K++ I       
Sbjct: 472 IVGGSMRIWKFDELSKAFKNVEIDPKPYYW 501



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAF 508
            +       F M +   ++     +        DL+  G  EI  G +R    + + +AF
Sbjct: 438 NRFPSEIKAFYMQRDAQDNTLTESV--------DLLMPGVGEIVGGSMRIWKFDELSKAF 489

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            NV I  +     +         G  PHGG   G++R +  L    ++R+V L+P 
Sbjct: 490 KNVEIDPKP----YYWYLDQRLYGTCPHGGYGLGLERFICWLTNTNHIRDVCLYPR 541


>gi|330935893|ref|XP_003305169.1| hypothetical protein PTT_17935 [Pyrenophora teres f. teres 0-1]
 gi|311317926|gb|EFQ86725.1| hypothetical protein PTT_17935 [Pyrenophora teres f. teres 0-1]
          Length = 575

 Score =  134 bits (336), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 63/286 (22%), Positives = 107/286 (37%), Gaps = 25/286 (8%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VHR R    ++F+ +RD YG  QV+   + A    A ++  E  + I G +
Sbjct: 148 GTRVRVFGRVHRERRQKDVMFVTLRDGYGYMQVILTGNLAKTYDALTLTRETSMEILGEL 207

Query: 78  MSRSAETINANIITGQIELSAQKIEIL----SVAEELPLPVFGEREYPESIRFKYRFLDL 133
               A     N      EL A    I     +   +  +     ++   +     R L L
Sbjct: 208 RQIPAGAHAPNDR----ELHADYYRIHDGWKAAGGDDAITNRVSKDTEHATLLDLRHLTL 263

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +T  K ++ R  +  +           + S P L  +  EG          N+ ++  
Sbjct: 264 RGETASKVMIVRDAVEFAFNQVYKEMRLRKVSPPALVQTQVEGGATLFKFGYYNEEAY-- 321

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL--- 250
           L Q+ Q Y +  + S     + I   FR E   + R   E+  ++ E+ ++  DD+L   
Sbjct: 322 LTQSSQLYLETCLPS-MGDVYCIEKSFRAEKSLTRRHLAEYTHIEAELDYINFDDLLIHL 380

Query: 251 -NTMENVL----------RGVFEEFSNGNTVSNNFLRICYDDAIRR 285
              M  VL          + + +           F R+ Y DAI  
Sbjct: 381 EEVMCRVLEVTMADPVVKQYIMDLNPEFQLPERPFKRMKYQDAIDW 426



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 42/122 (34%), Gaps = 5/122 (4%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
            +  F  + F         LK  D   +      L+    EI  G +R    + ++ AF+
Sbjct: 459 NRPIFLTH-FPTEIKAFYMLKDKDDARVTESVDCLMPGVGEIVGGSMRMDNYDELMAAFA 517

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
              I        +       + G  PHGG   G++R +  L     VR+  L+P     C
Sbjct: 518 REQIDPAA----YYWYTDQRKYGSSPHGGYGLGLERFLAWLCKQHTVRDCCLYPRYFGRC 573

Query: 570 DL 571
             
Sbjct: 574 KP 575


>gi|121705394|ref|XP_001270960.1| asparaginyl-tRNA synthetase Slm5, putative [Aspergillus clavatus
           NRRL 1]
 gi|119399106|gb|EAW09534.1| asparaginyl-tRNA synthetase Slm5, putative [Aspergillus clavatus
           NRRL 1]
          Length = 540

 Score =  134 bits (336), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 126/375 (33%), Gaps = 52/375 (13%)

Query: 9   CGD-LGVSDVG------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           C + L  +  G        ++++G++  VR      F +I D   I  + A    A    
Sbjct: 31  CAEVLRKNKAGRCQYEDQEIKVNGFIRSVRKQKRFAFAEISDGTTIEPLQAILKPA---Q 87

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           A  + +   + I GL  +       ++      EL   +++++  A+    P+  +   P
Sbjct: 88  ACELATGTAVEISGLWKACPPGKEQSH------ELQTTEVKVVGRADPETYPIQKKYHSP 141

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN---FIECSTPILTASSPEGAR 178
           E +R +   L LR          R+  +  +           F++   P++T+S  EGA 
Sbjct: 142 EFLR-QIPHLRLRTPFNSLLSRFRSECLYQLGNVFRNAPHGGFVQVQPPLITSSDCEGAG 200

Query: 179 DFLVP----------SRVNQGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDED 224
           +              S      F+  P+    + Q + +   A+     + I P FR E 
Sbjct: 201 ETFTVVPREAATGSASDNEGEHFFRAPKYLTVSSQLHLE-AYAAELGNVWTITPAFRAEK 259

Query: 225 PRSDRLPGEFYQLDMEMSFVEQ---------DDILNTMENVLRGVFEEFSNGNTVSNNFL 275
             + R   EFY L+ EM+F++            + +    + R    +       S    
Sbjct: 260 SDTPRHLSEFYMLEAEMNFMDDLGALTDSVEYTLRDLTLRLYRSPVRQEMLSAKRSGETG 319

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
                 A+        DL +      +T    +++     ++            P+  GG
Sbjct: 320 EDPTHGAVSGLQRRWIDLVDGPKWRRMT----YTQAIELLQLAVAKGQVSFEYAPSWDGG 375

Query: 336 GN----RAFCDRMNE 346
                 R   D +N+
Sbjct: 376 LQLEHERYIVDGLND 390



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 57/177 (32%), Gaps = 37/177 (20%)

Query: 418 NHIAQELGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             +  E  I++  N  +  ++ D+P             A  PF M    +   + +    
Sbjct: 376 LQLEHERYIVDGLNDGQPVFVTDYP------------KAVKPFYMAPSQVSEERDSTPGE 423

Query: 477 IKAFQYDLVCNGF-EIASGGIRNHM-SEVMLQAFSN---------------------VGI 513
             A  +DL+     E+A G +R H   E++    ++                       +
Sbjct: 424 TVAC-FDLLLPEVSEVAGGSLREHRLPEIIQNMRAHGLIKAREASTAETAAEEEPLYPHL 482

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                           + G  PHGG   G DR V  L G  +VR+V  FP      D
Sbjct: 483 LPHESLGHLQWYADLRRWGSAPHGGYGLGFDRFVSYLAGVSSVRDVVAFPRYFGRAD 539


>gi|315605849|ref|ZP_07880881.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315312547|gb|EFU60632.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 539

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 59/292 (20%), Positives = 102/292 (34%), Gaps = 33/292 (11%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG-ITQVVANPDSACFE 60
            RY     G+     VG    L+G V   R  G + F  + D  G   QV+ +  S   +
Sbjct: 53  ERYGHLEAGEETEDYVG----LAGRVVLARNGGKLCFATLMDGAGNKIQVMLSAASVGAD 108

Query: 61  IA----KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQ---------------KI 101
                   V     L + G V+S     ++      ++   A+                 
Sbjct: 109 SLAAYKNDVDLGDHLYVHGRVISSRRGELSIFATPAEVSEEARAAYDAAPTALPAPDASW 168

Query: 102 EILSVA-----EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCR 155
            I S A     +        E    E  R + R LDL      +++++ R  +  S+R  
Sbjct: 169 AIASKALRPLPKTWTTEDGEEVTLSEDQRIRRRELDLITRPAARDMIRVRAAVNRSIREN 228

Query: 156 MIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
               ++IE  TP+L        AR F           Y L  A + Y +  +  G DR F
Sbjct: 229 FFRRDYIELETPMLQVIHGGAAARPFTTHMNALDMELY-LRIATEIYLKRAVVGGVDRVF 287

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           ++   FR+E   S   P EF  L+   ++ + + +     ++++    +   
Sbjct: 288 EMNRNFRNEGMDSSHSP-EFTSLEAYEAYSDYNGMALLTRDLIQQAARDAFG 338



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 61/190 (32%), Gaps = 40/190 (21%)

Query: 382 VNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFP 441
                   R+ ++  D               +      I +EL  +    +   ++ DFP
Sbjct: 384 ETLVTYAERVGLEVDDYAV------------SGKIVEDIFEEL--VASKLWAPTFVYDFP 429

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
                E+   +   H                        ++DL   GFE A+        
Sbjct: 430 -----EDTSPLTRYHR----------------SRPGLTEKWDLYVRGFETATAYSELADP 468

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            V  + F    ++    +            A + G PP GG+  GIDR++M+L G   +R
Sbjct: 469 VVQRERFEAQALAAANGDPEAMVMDEDFLIAMEQGFPPCGGMGMGIDRLLMVLTGQG-IR 527

Query: 558 EVSLFPMSQN 567
           E   FP+ + 
Sbjct: 528 ETIPFPLVKR 537


>gi|300175294|emb|CBK20605.2| unnamed protein product [Blastocystis hominis]
          Length = 393

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 105/259 (40%), Gaps = 21/259 (8%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
           +ELSA    ++   +    P+  +   PE +R     +  R +        R  +I S+ 
Sbjct: 5   LELSAASYHVIGDCDPSSYPLQKKFHTPEFLR-SIPHIRPRSNLQGVVNRMRNTMIQSVH 63

Query: 154 CRMIAENFIECSTPILTASSPEGARDFLVP-----SRVNQGSFY---ALPQAPQQYKQLL 205
             + + +FI+  TPI+T++  EGA +         ++++  +F+   A      Q +  +
Sbjct: 64  HTLQSNDFIQVMTPIMTSNDCEGAGELFSVALASSNQIDLNAFFNSRAFLTVSGQLQAEM 123

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           MA    R +  AP FR E+  + R   EF+ ++ EM FV+  D+++  + V+  V +   
Sbjct: 124 MAHAMTRVYSFAPTFRAENSNTSRHLCEFWMIEPEMCFVQLPDLMDLAKKVIMDVAKNLE 183

Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
             +     FL              + D   P ++  + E   +        I  +    +
Sbjct: 184 GKHGEDFRFLE------------SRVDKTVPELVQTLREEKNYCHLTYTEAIDILTRKGQ 231

Query: 326 VWAIPAKGGGGNRAFCDRM 344
            + +P K G   ++  +R 
Sbjct: 232 KFEVPVKWGIDLQSEHERY 250



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 24/145 (16%)

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGM-ESLKGNDLLSIKAFQYDLVCNGF-------EIA 492
           P +              PF M   G  ++++  DLL  +     +VC G+       EI 
Sbjct: 260 PLFL-----THYPAEIKPFYMKDSGDGKTVEAMDLLVPR-----VVCFGWIRSDVQGEIV 309

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENR-----FGGLYRAFQCGMPPHGGIAAGIDRIV 547
            G +R    +V+ +     G+  E VE+              + G  PHGG   G++R++
Sbjct: 310 GGSMREDQYDVLKRRMEEKGLLSEEVESGRSTKALDWYLDLRRYGSVPHGGWGLGLERLI 369

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLL 572
               G +N+R+V   P       LL
Sbjct: 370 ETFTGVQNIRDVIPVPRVP-GSCLL 393


>gi|260946261|ref|XP_002617428.1| hypothetical protein CLUG_02872 [Clavispora lusitaniae ATCC 42720]
 gi|238849282|gb|EEQ38746.1| hypothetical protein CLUG_02872 [Clavispora lusitaniae ATCC 42720]
          Length = 545

 Score =  133 bits (335), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 64/330 (19%), Positives = 119/330 (36%), Gaps = 14/330 (4%)

Query: 19  SFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
             +++ G V  +R  G  + FLD+       QV A+                     G  
Sbjct: 84  QTIQIEGKVKAIRRAGKAMFFLDVIQDDAKVQVCASNKLLKDVTKDEFSRIHSFIRKGDH 143

Query: 78  MSRSAETINANIITGQIELSAQK-IEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           ++        N+  G++ L A K I + S           ++     +  K R ++   D
Sbjct: 144 ITCVGHPSTTNV--GELTLKATKPITVSSPCL--NSVTIPDKLIDRKLINKNRVMNYIVD 199

Query: 137 TLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYAL 194
              +  +K +  I  ++R  +  + F+E  TPIL  + +   A  F   S+       +L
Sbjct: 200 PESRQRIKVKGAITKAIRDFLHNDGFLEVQTPILAGNGTGANAEPFQTKSKAISDEKLSL 259

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+ + + L+  GFD+ F+I   FR+E   S   P EF   +   SF    +++   E
Sbjct: 260 RVAPELWLKKLVIGGFDKVFEIGSNFRNEGIDSTHNP-EFLTCEFYRSFTSLPELMKMTE 318

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
           ++   +  +  N  T S  FLR            + P       + + T H    +  V 
Sbjct: 319 DMFSFIHSQLLNHETSST-FLRERLRKLSSFQEGNFPKFEFIPTIESRTGH----QMPVN 373

Query: 315 SKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
               ++   Y+   +         +  D +
Sbjct: 374 FTTEALLEYYKKIGVKLPENKSPASLLDNL 403



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 5/90 (5%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG-----GLYRAFQCG 532
            + +++L  NG E  +     +      + F      K+   +           +  + G
Sbjct: 447 ISLRFELFINGREYVNSYEEENSPFEQAEKFKLQQACKKDFNDMESLIPDWNYVKQMEYG 506

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +PP GG   GIDR+ ML   +  + +V  F
Sbjct: 507 LPPTGGWGCGIDRLSMLFSDSNRIEDVLTF 536


>gi|207092494|ref|ZP_03240281.1| lysyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 374

 Score =  133 bits (335), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 5/171 (2%)

Query: 97  SAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCR 155
            A +  ILS    +PLP          +R++ R+LDL  +  +     KR+ I++S+R  
Sbjct: 1   HALEFHILSKT-IVPLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFKKRSLIVSSVRKF 59

Query: 156 MIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
              E F+E  TP++        AR F+      +   Y L  AP+ Y + L+  GF+  F
Sbjct: 60  FEMEGFLEVETPMMHPIPGGANARPFITYHNALEVERY-LRIAPELYLKRLIVGGFEAVF 118

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           +I   FR+E       P EF  ++   ++   +D++   + +   + +  +
Sbjct: 119 EINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLN 168



 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND     A +++L   G EIA+G    +     L+ F N    KE  +     +      
Sbjct: 264 NDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVW 323

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A   GMPP  G   GIDR+VMLL GAK++++V LFP  +
Sbjct: 324 ALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMR 362


>gi|156053|gb|AAA27849.1| 63kd antigen [Brugia malayi]
          Length = 548

 Score =  133 bits (335), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 65/389 (16%), Positives = 116/389 (29%), Gaps = 23/389 (5%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
                 V + GW+HR+R  G  ++F  +RD  G  QV+          A +V +E  + I
Sbjct: 121 KHRNERVCIKGWIHRMRRQGKSLMFFILRDGTGFLQVLLMDKLCQTYDALTVNTECTVEI 180

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +                 EL A   +I+  A    +      E         R L +
Sbjct: 181 YGAIKEVPEG----KEAPNGHELIADFWKIIGNAPSGGIDNVLNEEASVDKMLDNRHLVI 236

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +     +  R     +MR       ++E + P L  +  EG           + SF  
Sbjct: 237 RGENAAALLRLRAAATRAMREHFYNAGYVEVAPPTLVQTQVEGGSTLFNLDYFGEQSF-- 294

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L Q+ Q Y +  + +     F      +           E+  ++ E  F+  DD++  +
Sbjct: 295 LTQSSQLYLETCIPT-LGDVFLHCSVLQGGKISHSSTLAEYAHVEAECPFITLDDLMEKI 353

Query: 254 ENVLRGVFEEFS--------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
           E ++    +                         FLR+ Y DAI+       +       
Sbjct: 354 EELVCDTVDRLLADEEAKKLLEHINPKFQPPERPFLRMEYKDAIKWLQEHNVENEFGNTF 413

Query: 300 HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
               E    +  R  +  ++       +    K     R   D     +     PG+  I
Sbjct: 414 T-YGEDIAEAAERFMTDTINKPILLNRFPSEIKAFYMQRDAKDNTLTESVDLLMPGVGEI 472

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIR 388
                       +    K++ I       
Sbjct: 473 VGGSMRIWKFDELSKAFKNVEIDPKPYYW 501



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAF 508
            +       F M +   ++     +        DL+  G  EI  G +R    + + +AF
Sbjct: 438 NRFPSEIKAFYMQRDAKDNTLTESV--------DLLMPGVGEIVGGSMRIWKFDELSKAF 489

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            NV I  +     +         G  PHGG   G++R +  L    ++R+V L+P 
Sbjct: 490 KNVEIDPKP----YYWYLDQRLYGTCPHGGYGLGLERFICWLTNTNHIRDVCLYPR 541


>gi|289741901|gb|ADD19698.1| mitochondrial asparaginyl-tRNA synthetase [Glossina morsitans
           morsitans]
          Length = 461

 Score =  133 bits (334), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 98/269 (36%), Gaps = 30/269 (11%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  + + GW+  VR     +F DI D   + +          E   +V +  ++ + G +
Sbjct: 24  GDTLEVRGWIKSVRRLKNNVFFDISDGSTMQKFQVVVPKN--EQLTAVSAGNLVRVLGQL 81

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAE-ELPLPVFGEREYPESIRFKYRFLDLRRD 136
                         G  EL A  +E ++        P   ++++      +Y  L  R  
Sbjct: 82  QVAPQ---------GHYELHANSLETIAEGNLNSGYPFSPKQQHDPEYVREYLHLRSRTS 132

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------- 189
                +  R +   ++   M   +FI  +TPILT +  EGA +       +         
Sbjct: 133 RTAAIMRLRHKTQMALHKFMDKHDFIHINTPILTTNDCEGAGEVFTVQPDSDELLKQMSR 192

Query: 190 -------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  S++          Q     M+ G    + I+P FR E+ +S     EFY  + 
Sbjct: 193 PPVPLSQSYFDSKVYLTVSGQLHLESMSYGLGNTYTISPAFRAENCKSPLHLSEFYMFEA 252

Query: 240 EMSFVEQ-DDILNTMENVLRGVFEEFSNG 267
           E+ F+E  +++   +E +++ V  +    
Sbjct: 253 ELVFIENLEELCRFIEKMIKSVTNDILKF 281



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 51/149 (34%), Gaps = 30/149 (20%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           QEL +++       +++++P             A  PF M       +   D   + A  
Sbjct: 340 QELFLVDYCK-APVFVINWP------------AAQKPFYMK------ISREDSSKVYAL- 379

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+     E+  G         + +   N                   + G  P GG  
Sbjct: 380 -DLLMPVVAELCGGS--------LRECDVNRLQEHPHFPQGLEWYLELRKFGGLPTGGFG 430

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G +R + LL G KN+R+V  FP   + C
Sbjct: 431 MGFERFLQLLTGVKNIRDVIPFPRYPHSC 459


>gi|50291447|ref|XP_448156.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527467|emb|CAG61107.1| unnamed protein product [Candida glabrata]
          Length = 543

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 115/279 (41%), Gaps = 15/279 (5%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACF 59
           + +Y + S   L    +   + L G +  +R  G  + F+D+ D     Q++ N      
Sbjct: 68  LKKYGSTSEDQLNK--INQKISLCGRIKSIRFSGKKMAFIDLVDGIHGIQLILNCREIG- 124

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGER 118
             + +  SE      G  +  +     +      I L    + +ILSVA+    P    +
Sbjct: 125 -NSATFESELSFLRKGDYVMTTGLPRLSKSRMKNISLRCTDLPKILSVAQMPLPP----K 179

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGA 177
                     + +D + +        R+ I+ S+R  +   +FIE  TPIL+  S+   A
Sbjct: 180 LIDTVKSNSNKVVDYQINGFQNI-RIRSSILKSIRNFLEERDFIEVETPILSSKSNGAVA 238

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
           + F+  S+        L  AP+ + + L+ SG ++ F+I   FR+E       P EF  L
Sbjct: 239 KPFMSSSK--DFDKLMLRVAPELWLKRLIISGCNKVFEIGKSFRNEGIDGSHNP-EFTTL 295

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           +   S++  +D++   E++ + +  + +N  T+      
Sbjct: 296 EFYQSYLTMEDLIKLNEDLFKKIITDLTNNLTIKQYLPE 334



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 8/123 (6%)

Query: 448 EEKKIDFAHNPFTMPQGGMES-LKGNDLLSIKA-FQYDLVCNGFEIASGGIRNHMSEVML 505
           EEK  + +H         + S L  ++    +   +++L   G E ++     +  +V L
Sbjct: 412 EEKYCNSSHPTIIYHHPAVISPLAKSNPDDSRTTKRFELFIKGREYSNAYEEENCPQVQL 471

Query: 506 QAFSNVGISKEVVENRF------GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
           + F      KE   +             A + GMPP GG   GIDR+ ML+ G + + +V
Sbjct: 472 EKFEQQARMKEDYGDNDTLSSIDQEYINAMKWGMPPIGGFGLGIDRLCMLITGCQRIEQV 531

Query: 560 SLF 562
             F
Sbjct: 532 LPF 534


>gi|315054079|ref|XP_003176414.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311338260|gb|EFQ97462.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 563

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/296 (19%), Positives = 107/296 (36%), Gaps = 29/296 (9%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFEIAK---SVR 66
           L        + +   V   R     + FL + +    I  V+A  +    ++ K    + 
Sbjct: 97  LSDDHYEKEITVIARVDNARVQSAKLAFLMLRQQGKKIQAVIALKEPLSRQMIKWTGQLN 156

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE---- 122
              ++ + G+V        +A++    +EL   KI ++S A  +      + E P     
Sbjct: 157 VNSIVQVSGVVKKPEIPVHSASLPN--MELHITKIYMVSEAIPMLPMQVKDAERPPPEST 214

Query: 123 ---------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP 167
                            R   R LDL+ +T    +   + +       M+        T 
Sbjct: 215 EEGLVDTDGTPIVTLKTRLDNRILDLQTETSQAIMAISSGVAQLFSEYMLKSGSRWIFTS 274

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            +T ++ EG       S   + ++  L Q+PQ  KQ+ +A      F+I P FR ED  +
Sbjct: 275 KITGAATEGGSGVFEISYFKRKAY--LSQSPQLGKQMCIAGDMMSVFEIGPVFRAEDSNT 332

Query: 228 DRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
            R   EF  LD E +F     ++L+  E++L  +  E           ++  Y  A
Sbjct: 333 HRHLTEFIGLDFERTFQKHYHEVLDFAEDLLVFILSELKARFKDEIAVVQKSYPKA 388


>gi|73956990|ref|XP_861414.1| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 4 [Canis familiaris]
          Length = 557

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/275 (18%), Positives = 99/275 (36%), Gaps = 53/275 (19%)

Query: 6   THSCGDLGVSDVGS-----FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF 59
           TH   + G    G       ++++G +H  R  G  +IF D+R      QV+AN  S  +
Sbjct: 106 THFIEEYGHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNY 163

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
           +  +           G ++             G++ +   +I +LS      LP      
Sbjct: 164 KSEEEFIHINNKLRRGDIIGVKGNP--GKTKKGELSIIPYEITLLSPCL-HMLPHLHFGL 220

Query: 120 YPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
             +  R++ R+LDL  +   +   + R++II  +R  +    F+E               
Sbjct: 221 KDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEI-------------- 266

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                                     L+  G DR ++I   FR+E       P EF   +
Sbjct: 267 --------------------------LVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCE 299

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
             M++ +  D++   E ++ G+ +  +    V+ +
Sbjct: 300 FYMAYADYHDLMEITEKMISGMVKHITGSYKVTYH 334



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 439 KEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 498

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 499 YGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFPAMK 534


>gi|159466544|ref|XP_001691469.1| tRNA synthetase, class II [Chlamydomonas reinhardtii]
 gi|158279441|gb|EDP05202.1| tRNA synthetase, class II [Chlamydomonas reinhardtii]
          Length = 551

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 95/248 (38%), Gaps = 19/248 (7%)

Query: 5   RTHSCGDLGVS----------DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH   +L             + G+ V ++G V   R  G + FL +RD  G  Q+    
Sbjct: 60  RTHFTTELQEQFAALENGAHDESGAVVSVAGRVVAKRVMGKLSFLSLRDDKGQIQLYVEK 119

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
                +          L   G ++  +      +   G++ + A  +++L+         
Sbjct: 120 AGLDAQQPGGFDLVKGLVDVGDIVGCTGGLKRTD--KGELSVVATGLQVLAKPLMTRADK 177

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
               E       +       RDT       R++II+ +R ++    F+E  TP+L + + 
Sbjct: 178 PLGIEEAGGRGREEGGERTVRDTFRA----RSKIISCIRRQLEDRGFLEVETPVLESVAG 233

Query: 175 EG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR F       +  F  L  A + + + L+  GF+R F++   FR+E   S   P E
Sbjct: 234 GADARPFRTFHNTLRRDF-TLRIATELHLKRLVVGGFERVFELGRIFRNEGVSSRHNP-E 291

Query: 234 FYQLDMEM 241
           F  +++  
Sbjct: 292 FTSVEIYQ 299



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 45/151 (29%), Gaps = 30/151 (19%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            +E   E   +       +P  +                   +++L   G E A+     
Sbjct: 405 MFEALAEAGLMQPTFVTEHPVEISPLAKPHRSKP----GVTERFELFIYGREHANAFSEL 460

Query: 499 HMSEVMLQAFSNVGISKEVVENR-----------------------FGGLYRAFQCGMPP 535
             +      F                                          A + G+PP
Sbjct: 461 TDAVEQRVRFEEQVARHNRAFEERKQVCAGEGSDAEEAEEDYEVAVDYDFIAALEHGLPP 520

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GG+  G+DR+VM+L  + ++R+V  FP+ +
Sbjct: 521 TGGLGIGVDRLVMMLTDSPSIRDVIAFPLMK 551


>gi|312084588|ref|XP_003144336.1| hypothetical protein LOAG_08758 [Loa loa]
 gi|307760499|gb|EFO19733.1| hypothetical protein LOAG_08758 [Loa loa]
          Length = 444

 Score =  133 bits (334), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 19/250 (7%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             +R+ GW  RV   G  +FL I D   +  + A       +I   V     + I G  +
Sbjct: 26  KDIRIQGWARRVETRGKFLFLHISDGCSLKTIQAVVQR---DICPKVPVGSAVDIVGDWV 82

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               +  N       +EL A   E+  + ++    +  E    +  R KY  L ++    
Sbjct: 83  KSDGKQQN-------MELFATNCEVAGLQQKTFSELPTEECCADVTRKKY-HLRMKSIPF 134

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY-----A 193
              +  R+R+    R     E+FI   TP+LT +  EGA D       N+G+++      
Sbjct: 135 MCLLRLRSRLDQLSRSFFQEESFIHVDTPLLTHNDCEGAGDVFTVQT-NRGNYFGDQAVY 193

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNT 252
           LP + Q + +        + + IAP  R ++ ++ +   EF  L+ E +F +  + + + 
Sbjct: 194 LPVSSQLHLES-FVGSLPKVYTIAPALRADNSQTRQHLAEFRMLEAEYAFADDLEQLCDL 252

Query: 253 MENVLRGVFE 262
           +E  +  V +
Sbjct: 253 VERYVNYVVD 262



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 26/125 (20%)

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNH 499
           P +       +      PF M + G             A  +DL+     E+A G +R  
Sbjct: 338 PLFVL-----RYPHIQKPFYMKRCGNY-----------AECFDLLAPFVGELAGGSLRES 381

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
            SE + +            +N         Q G P   G   G++R +  L G  N+++ 
Sbjct: 382 DSEELRRRGC---------DNSLDWYLEMRQHGHPTSAGFGIGLERFMQTLFGILNIKDT 432

Query: 560 SLFPM 564
             FP 
Sbjct: 433 VAFPR 437


>gi|255731806|ref|XP_002550827.1| hypothetical protein CTRG_05125 [Candida tropicalis MYA-3404]
 gi|240131836|gb|EER31395.1| hypothetical protein CTRG_05125 [Candida tropicalis MYA-3404]
          Length = 483

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/267 (20%), Positives = 99/267 (37%), Gaps = 26/267 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             + VGS +   G+V  +R    + F+DI D         N      E  K  +    + 
Sbjct: 30  SPAKVGSIIEARGFVKSIRTSKKVGFVDISDGS--IHKNLNIVLQGSEQPK-FKVGQSII 86

Query: 73  IDGLVMSRSAETINANIITGQIELS------AQKIEILSVAEELPLPVFGEREYPESIRF 126
           + G               T   EL         KI IL   +        ++        
Sbjct: 87  VKGEWCQGKG--------TQPFELKYNPKNPDHKITILG--DVTEDYPLQKKSTSMPFLR 136

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            +  L  R +TL   +  R+ +   +      ++FI+ + P++T+S  EGA +       
Sbjct: 137 TFPELKHRTNTLASFLRLRSHMEFKLMEFFQQQDFIKVTPPLITSSDCEGAGEVFSVHSA 196

Query: 187 NQ---GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +      F+   A      Q     +A   +R + + PCFR E   + R   EF+ L+ E
Sbjct: 197 SDKPNEKFFGKNAYLTVSTQLHLECLALALNRAWTLTPCFRAEQSNTTRHLSEFWMLEAE 256

Query: 241 MSFVE-QDDILNTMENVLRGVFEEFSN 266
           +S V+    + N +E+++R V +   +
Sbjct: 257 ISHVDSVHQVTNFIEDMVRYVTQSLMD 283



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 22/138 (15%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL-VCNGFEI 491
              +I D+P             A  PF M +         D        +DL V    E+
Sbjct: 365 SPIFITDYP------------SAQKPFYMIKSA-----NFDPEKPTVACFDLLVPEFGEL 407

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
           A G +R H  EV+ +   +  +  + ++          + G  PHGG   G +R++  L 
Sbjct: 408 AGGSLREHDYEVLKKNLEDHQMDMQDMD----WYLNLRRQGTVPHGGFGLGFERMITFLA 463

Query: 552 GAKNVREVSLFPMSQNFC 569
           G  NVR+VS FP + + C
Sbjct: 464 GYDNVRDVSAFPRAPDLC 481


>gi|259485979|tpe|CBF83457.1| TPA: asparaginyl-tRNA synthetase Slm5, putative (AFU_orthologue;
           AFUA_3G09630) [Aspergillus nidulans FGSC A4]
          Length = 537

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/284 (20%), Positives = 107/284 (37%), Gaps = 34/284 (11%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +   R  +C     S     +RL G+V  VR      F +I D   +  + A    A   
Sbjct: 34  LQSSRQETC-----SLEDQEIRLHGFVRSVRKQKRFAFAEISDGTAVEGIQAILKPA--- 85

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  + +   + I G+  +       ++      EL A  + I+  AE    P+  +   
Sbjct: 86  QAAELSTGTAIEISGIWKACPPGKEQSH------ELQATSVNIVGAAEPETYPIQKKYHS 139

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI---AENFIECSTPILTASSPEGA 177
           PE +R     L  R          R+  +  +           F++   P++T+S  EGA
Sbjct: 140 PEFLRH-IPHLRFRTPLNALLARFRSECLYQLGNVFRGAPNGGFVQVHPPVITSSDCEGA 198

Query: 178 RDFLVP----------SRVNQGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDE 223
            +               +     F+  P+    + Q + +   A+     + ++P FR E
Sbjct: 199 GETFAVIPRETLIKGLPKEEHDHFFRAPKYLNVSSQLHLE-AYAAELGNVWTLSPMFRAE 257

Query: 224 DPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSN 266
              + R   EFY L+ E++F+ + D + +T+E +LR +     +
Sbjct: 258 KSDTPRHLSEFYMLEAEVNFLSDLDALTDTVEYLLRDLTRRLYD 301



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 37/161 (22%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P                PF M     +S    +  ++    +DL+     E+
Sbjct: 390 QPIFVTDYP------------KVIKPFYMAPSHTQSNPKAEGETVAC--FDLLLPEVSEV 435

Query: 492 ASGGIRNHMSEVMLQAFSNV----------------------GISKEVVENRFGGLYRAF 529
           A G +R H    ++Q                            +      +         
Sbjct: 436 AGGSLREHRLPELIQNMREHNLIKTSPSNSEEEANQGEAPYPHLLPGEDLSHLQWYADLR 495

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           + G  PHGG   G DR +  L G +++R+   FP      D
Sbjct: 496 RWGSAPHGGFGLGFDRFLGYLTGVQSIRDTVAFPRYFGRAD 536


>gi|212543239|ref|XP_002151774.1| asparaginyl-tRNA synthetase Slm5, putative [Penicillium marneffei
           ATCC 18224]
 gi|210066681|gb|EEA20774.1| asparaginyl-tRNA synthetase Slm5, putative [Penicillium marneffei
           ATCC 18224]
          Length = 560

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 103/272 (37%), Gaps = 34/272 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              + L G++  VR      F +I D   +  + A       E A  + +   + I G+ 
Sbjct: 55  NEEITLKGFIRSVRKQKRFAFAEISDGSTVKSLQA---ILTPEQAADLSTGTAIEISGIW 111

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A     +      EL   +I I+  A+    P+  +    + +R +   L LR   
Sbjct: 112 KACPAGKEQTH------ELQTSEIRIVGDADAETYPIQKKYHSSDFLR-QIPHLRLRTPF 164

Query: 138 LHKNIVKRTRIINSMRCRMIAEN---FIECSTPILTASSPEGARDFLVPS---------- 184
                  R+  I  +     +     FI+   P++T+S  EGA +    S          
Sbjct: 165 SSLLARFRSETIYQLGQVFRSVPQGGFIQVQPPLITSSDCEGAGETFTLSPQSSGLPLDS 224

Query: 185 -----RVNQGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                 +    F+  P+    + Q + +   A+     + ++P FR E  ++ R   EFY
Sbjct: 225 PKGSEELEYLHFFRNPKYLTVSSQLHLE-AYAAELGNVWTLSPTFRAEKSKTPRHLSEFY 283

Query: 236 QLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
            L+ E++F  +   +L+ +E ++R +     +
Sbjct: 284 MLEAEVNFTNELPALLDLVEYLIRDLARRLYD 315



 Score = 67.8 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 50/167 (29%), Gaps = 44/167 (26%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG-FEIA 492
             ++ D+P                PF M           D  ++    +DL+     E+ 
Sbjct: 407 PVFVTDYP------------QKVKPFYMAPSEGADAGHPDQATVAC--FDLLFPEICEVV 452

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVEN-----------------------------RFG 523
            G +R H    ++      G+ K+  ++                                
Sbjct: 453 GGSLREHRLAELISKMREYGLIKQGPQSSKLMDDNENEHILALSKNYPYLQPGETLGHLQ 512

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                 + G  PHGG   G DR++  L G  ++R+V  FP      D
Sbjct: 513 WYADLRRWGSAPHGGFGLGFDRLLGYLAGVGSLRDVVPFPRYFGRAD 559


>gi|46117424|ref|XP_384730.1| hypothetical protein FG04554.1 [Gibberella zeae PH-1]
          Length = 575

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 69/386 (17%), Positives = 118/386 (30%), Gaps = 49/386 (12%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDI-----RDHYGITQVVANP---DSACFEIA 62
           L  S  G  V +  W+   R     + F+++      D  G+               +  
Sbjct: 90  LDESYDGKTVIVRAWLQNSRVQSAKMGFVELRKGGNWDIQGVIMASDKEPVVSKPMVKFV 149

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-------------- 108
            S+  E  + +   V        +  + T  +EL   K  +L+ A               
Sbjct: 150 TSISPESFVVVQATVKKPLEPVKSCRVST--LELHINKCYVLAPAPAVLGMTMDAASQPI 207

Query: 109 ---ELPLPVFGEREYPESIRFKY------RFLDL-----RRDTLHKNIVKRTRIINSMRC 154
                      E E P               LD      R          R  +    R 
Sbjct: 208 VNFSDESKAGDEAEKPAETTSTIPSASMLTHLDNIAMHKRTPVQQAIADIRIEVKRLFRN 267

Query: 155 RMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
            +   +F E   P L  ++ EG  +        + +F A  Q+PQ YKQ  +A G +R F
Sbjct: 268 YLEPRHFKEFEPPCLIGAASEGGGNVFRLPYFGEEAFLA--QSPQFYKQFEIAGGRERVF 325

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNN 273
              P FR E+  + R   EF  LD+EM   +   ++L+ +E VL  +             
Sbjct: 326 SSGPVFRAENSNTPRHMTEFTGLDLEMEIKDSYLEVLDVLEGVLLSILRGIHERCATEIE 385

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI-----LSVNPGYEVWA 328
            +R  Y            ++R  +   +  +         F+ +     +S      +  
Sbjct: 386 TVRSVYGSEPLLLPEPGKEVR--LTFADAQKLLREEGPAEFANVRDDEDMSTPQEKALGE 443

Query: 329 IPAKGGGGNRAFCDRMNEWARSQGQP 354
           +  K    +    D+  E AR     
Sbjct: 444 VVRKKYNTDFYVIDKFPETARPFYAK 469



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 5/122 (4%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF        +  G+ +    A  +D+   G E+ SGG R    + + +    
Sbjct: 458 KFPETARPFYAKLDDAGTTIGDGVRVTNA--FDMFIRGQEVLSGGQRVSNPDELEERIRA 515

Query: 511 VGISKEVVENRFGGLYRAFQC-GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            GI  +   +        F+  G+P HGG   G+DRIV   L   +V   + +P +    
Sbjct: 516 KGIDPKS--DGIKEYLAVFRQVGVPAHGGGGFGLDRIVAWALALPSVHLAAYYPRTPKRL 573

Query: 570 DL 571
             
Sbjct: 574 AP 575


>gi|242786063|ref|XP_002480728.1| asparaginyl-tRNA synthetase Slm5, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218720875|gb|EED20294.1| asparaginyl-tRNA synthetase Slm5, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 565

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 34/272 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              V L G+V  VR      F +I D   +  + A       E A  + +   + I G  
Sbjct: 56  NEEVTLKGFVRSVRKQKRFAFAEISDGSTVKSLQA---ILTPEQAADLSTGTAIEISGRW 112

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +  A     +      EL   K++I+  A+     +  +   P+ +R +   L LR   
Sbjct: 113 KACPAGKEQTH------ELQTSKVKIVGYADPETYLIQKKYHSPDFLR-QIPHLRLRTPF 165

Query: 138 LHKNIVKRTRIINSMRCRMIAEN---FIECSTPILTASSPEGARDFLVPSRV-------- 186
                  R+  I  +     +     F++   P++T+S  EGA +    S          
Sbjct: 166 NSLLSRFRSETIYQLGQVFRSVPQGGFVQVQPPLITSSDCEGAGETFTLSPQSSAPPPSG 225

Query: 187 -------NQGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                      F+  P+    + Q + +   A+     + ++P FR E  ++ R   EFY
Sbjct: 226 SKGSEDEEHLHFFRSPKYLTVSSQLHLE-AYAAELGNVWALSPTFRAEKSKTPRHLSEFY 284

Query: 236 QLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
            L+ E++F +    +L+ +E ++R +     +
Sbjct: 285 MLEAEVNFTDDLPALLDLVEYLIRDLARRLYD 316



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 48/171 (28%), Gaps = 48/171 (28%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG-FEIA 492
             ++ D+P                PF M           D  ++    +DL+     E+ 
Sbjct: 408 PVFVTDYP------------QKVKPFYMAPSEGADAAHPDQATVAC--FDLLFPEICEVV 453

Query: 493 SGGIRNHM-SEVMLQAFSNVGI--------------------------------SKEVVE 519
            G +R H   +++++      I                                      
Sbjct: 454 GGSLREHRLPQLIIKMREYGLIKHGSTKPSSSSQPNDDKDDEHVLDLSKNYPYLQPSETL 513

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                     + G  PHGG   G DR++  L G  ++R+V  FP      D
Sbjct: 514 GHLQWYADLRRWGTAPHGGFGLGFDRLMGYLAGVSSLRDVVPFPRYFGRAD 564


>gi|38234687|ref|NP_940454.1| lysyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|38200951|emb|CAE50668.1| Putative integral membrane protein/lysyl-tRNA synthetase fusion
           [Corynebacterium diphtheriae]
          Length = 1049

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 14/247 (5%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            L+G +  +R HG ++F D+ +    TQ++ +  +       ++ S   L   G ++S +
Sbjct: 619 SLTGRIWFIRNHGQVLFADVVEGERRTQLLIDATTP-----DALASFKRLVSRGDIISAT 673

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
              +      G   L  Q   + + +            +    R K+R +D   ++  ++
Sbjct: 674 G--VMGQSRNGTPSLLVQSWTMAAKSLVPMPRQASRNPH---TRAKFRHIDFTMNSQARS 728

Query: 142 IV-KRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           I   R+R I ++R  ++++ ++E  TPIL T      AR F    R        L  AP+
Sbjct: 729 IFSARSRAITAVRSVLVSQGYLEAETPILQTIHGGANARPFRTHIRAYD-QPLTLRIAPE 787

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + L+  GF+R F++   FR+E   +   P EF  L+   ++   D +    EN++R 
Sbjct: 788 LYLKRLVVGGFERVFEMGRNFRNEGVDATHNP-EFTSLEAYQAYGNWDTMRELTENIIRS 846

Query: 260 VFEEFSN 266
                  
Sbjct: 847 AAIAVHG 853



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 54/154 (35%), Gaps = 28/154 (18%)

Query: 414  ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
             D  N +  EL        E   +  FP +             +P TM            
Sbjct: 912  GDLVNELYDEL-------VEPTTV--FPTF-----YAGFPVETSPLTMADPD-------- 949

Query: 474  LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----KEVVENRFGGLYRAF 529
                 A ++DLV  G E+ +               ++  +                 +A 
Sbjct: 950  -EPRIAQRWDLVACGMELGTAYTELADPIEQRARLTDQSLRAAGGDAEAMELDENFLQAL 1008

Query: 530  QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            + GMPP GG+  GIDR+VM L G +N+REV  FP
Sbjct: 1009 EFGMPPTGGLGIGIDRLVMFLTG-QNIREVLAFP 1041


>gi|329123659|ref|ZP_08252219.1| aspartate--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327469858|gb|EGF15323.1| aspartate--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 93

 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 33/93 (35%), Positives = 52/93 (55%)

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +    F  +GI +E    +FG L  A + G PPH G+A G+DR+ MLL G +N+R+V  F
Sbjct: 1   MQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAF 60

Query: 563 PMSQNFCDLLMGSPSTVSVEQLRELGLRIVENP 595
           P +     L+  +PS  + + L EL + +V+  
Sbjct: 61  PKTTAAACLMTEAPSFANPQALEELAISVVKAE 93


>gi|161671290|gb|ABX75497.1| asparaginyl-tRNA synthetase [Lycosa singoriensis]
          Length = 249

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 91/234 (38%), Gaps = 20/234 (8%)

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           + +E  +C+ G++              G  EL     +++  +    +      E    +
Sbjct: 6   LSTESTICVYGVLNEVPEG----KSAPGGHELQCDYWQLIGDSPPGGIDNVLNEESHIDV 61

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           +   R L LR + L K +  R+ ++   R      ++IE + P L  S  EG        
Sbjct: 62  QLDNRRLMLRGENLSKIVAIRSFLMQCFRSHYFENHYIEVTPPTLVQSQVEGGSTLFKLD 121

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              Q ++  L Q+ Q Y + ++ S     F IA  +R E  R+ R   E+  ++ E  F+
Sbjct: 122 FFGQEAY--LTQSSQLYLETVIPS-LGDVFCIAMSYRAEQSRTRRHVAEYTHIEAECPFI 178

Query: 245 EQDDILNTMENVLRGVFEEFSN-------------GNTVSNNFLRICYDDAIRR 285
             +D+L+ +E+++  V +                        F R+ Y DAI+ 
Sbjct: 179 TFNDLLDRLEDLICDVVDRVLKSPIGQLVYEFNPEFKAPKKPFRRMNYADAIQY 232


>gi|309799292|ref|ZP_07693539.1| aspartyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308117070|gb|EFO54499.1| aspartyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 141

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 5/139 (3%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI- 61
             R+   G +    +G  + L GWV R R  GG+IF+D+RD  GI Q+V NP+    E+ 
Sbjct: 1   MKRSMYAGRVREEHIGQEITLKGWVARRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVM 60

Query: 62  --AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
             A+S+RSE+V+ + G V +R  E  N  + TG +EL+   + +L+ A+  P  +    E
Sbjct: 61  ATAESLRSEFVIEVTGQVAAR--EQANDKLATGAVELNVTALSVLNTAKTTPFEIKDGIE 118

Query: 120 YPESIRFKYRFLDLRRDTL 138
             +  R +YR+LDLRR  +
Sbjct: 119 ANDDTRLRYRYLDLRRPEM 137


>gi|321257875|ref|XP_003193737.1| asparagine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317460207|gb|ADV21950.1| asparagine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 513

 Score =  132 bits (331), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 92/265 (34%), Gaps = 21/265 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
             S V   V ++GW+  VR H  + FL++ D      V A           S+       
Sbjct: 37  TASCVNEPVEVNGWIKSVRAHKNVAFLEVSDGSTGENVQAVLKGKNRAEGLSI------- 89

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G           +      +EL  +  ++L   +    P+  ++  P S+      L 
Sbjct: 90  --GTSTKLKGRLEQSRGRGQDVELVVEDAQVLGTCDAEAYPIQ-KKSLPASVLRDNAHLR 146

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP-------SR 185
            R       +  R  +         + +F+   TPILT S  EGA +           S 
Sbjct: 147 FRTSQTAAVMRIRDALARDWHDWFESNDFVHVHTPILTGSDCEGAGEVFTIVDHPPPSSP 206

Query: 186 VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            +   F+          Q           R + ++P FR E   + R   EF+ L+ E++
Sbjct: 207 TSPQPFFPHSVHLTVSGQLHLEAPTHALSRTYTLSPAFRAEPSLTSRHLSEFHMLEAEVA 266

Query: 243 FVEQDD-ILNTMENVLRGVFEEFSN 266
           + +  D +L+ +E  ++ V     N
Sbjct: 267 WQDDLDGLLSIVEEGMKNVVGNILN 291



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 15/130 (11%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             ++  +P     +E+K       P TM     E+ +G          +DL+   + EIA
Sbjct: 389 PVFVTRYP-----KEQKPFYMLPTPSTMKNEKTEASRGP-----TVECFDLLFPHWGEIA 438

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G +R H    +      +G+ K      +G      + G  PHGG   G DR V    G
Sbjct: 439 GGSLREHRLAELTHVIEEMGMKK----EEYGWYLDLRKYGSVPHGGWGMGWDRWVGWATG 494

Query: 553 AKNVREVSLF 562
             NVR+V  F
Sbjct: 495 MGNVRDVVPF 504


>gi|149235416|ref|XP_001523586.1| hypothetical protein LELG_05002 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452565|gb|EDK46821.1| hypothetical protein LELG_05002 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 547

 Score =  132 bits (331), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 104/247 (42%), Gaps = 15/247 (6%)

Query: 23  LSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + G +  +R  G  + F D+       QV+ +      E ++  R          V   S
Sbjct: 104 IEGRISGIRKFGKAMFFFDLVQDNCKLQVLISNSLVVLEKSEFDRVHSWFKEGDYV---S 160

Query: 82  AETINANIITGQIELSA-QKIEILSVAEELPLPVFGEREYPESIRFKYRFL-DLRRDTLH 139
                +   TG++ L     + +LS           ++   + I  + R +  L      
Sbjct: 161 CHGFASRTKTGELTLKVNTPVRMLSPCLIQLP----DKLIDKGIINQNRVMNYLVNPKSA 216

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAP 198
             I+ ++++I ++R   I + F+E  TPIL++  +   A+ FL      +     L  AP
Sbjct: 217 NPIIVKSQVIQAIRQFFINKGFLEMQTPILSSLGTGANAQPFLTK---FKDDHVQLRVAP 273

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + ++ +GF++ F+I   FR+E       P EF   +   SF   ++++N  E +L+
Sbjct: 274 ELWLKKMVIAGFEKIFEIGNNFRNEGIDQSHNP-EFTSCEFYQSFTSLEELMNITEELLK 332

Query: 259 GVFEEFS 265
            +F +F 
Sbjct: 333 QIFHKFK 339



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 5/89 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG-----LYRAFQCGM 533
           + +++L  NG E  +     +  ++ L  F     +K+   +           +  + G+
Sbjct: 450 SLRFELFINGKEYVNAYEEENNPKIQLAKFQQQKANKQKYGDNEMLIPDWEYVKTMEMGL 509

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           PP GG   GIDR+ M + GA+ + EV  F
Sbjct: 510 PPTGGWGIGIDRLAMYVSGAERIDEVLPF 538


>gi|156046677|ref|XP_001589717.1| aspartate-tRNA ligase [Sclerotinia sclerotiorum 1980]
 gi|154693834|gb|EDN93572.1| aspartate-tRNA ligase [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 571

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/301 (18%), Positives = 113/301 (37%), Gaps = 37/301 (12%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHY-----GITQVVANPDSACFEIAKS 64
           ++G   +G  +++  W+   R  G  + F+++R+       G+    A       ++ K 
Sbjct: 92  EIGEQHIGKTIKVRAWIQNARMQGAKMAFVELREEGNWTVQGVVSASAEGKPVSKQMVKW 151

Query: 65  ---VRSEWVLCIDGLVMS-----RSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
              ++ E  + ++ +V       +S +  N  +   ++ L A   E+L +         G
Sbjct: 152 IGGLKLESFVAVEAVVQKPLESVKSTKVSNFELHLAKVYLVAAAPEMLGLGLGPASRAVG 211

Query: 117 EREYPESI--------------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM 156
           + +  E +                          +  R          R  + +     +
Sbjct: 212 KLDEEEDLSEAAAGLSVTEGTPTASLASHLNNPAMHKRAPVSQAIADIRIAVEDYFCDYL 271

Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216
            +  F +   P L  ++ EG  +       ++ ++ A  Q+PQ YKQ  +A G  R + +
Sbjct: 272 RSHRFKKFHPPCLIGAASEGGANVFRMPYFDKEAYLA--QSPQFYKQFEIAGGRKRVYCV 329

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            P FR E+  + R   EF  LD+EM   E   ++L+ +E VL  +F   +         +
Sbjct: 330 GPVFRAENSNTPRHMTEFIGLDLEMEIDEHYHEVLHMLEGVLLFIFRNLAENYREEIELI 389

Query: 276 R 276
           R
Sbjct: 390 R 390



 Score = 47.4 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 44/122 (36%), Gaps = 11/122 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF                      YD +  G EI SGG R H+ E + +   +
Sbjct: 460 KFPVDARPFYAMPD--------PENPAVTNAYDFMMRGQEILSGGQRLHLPEQLEEVIRS 511

Query: 511 VGISKEVVENRFGGLYRAFQ-CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G+     +         F+  G+PPHGG   G+DR+V   L   +V  V  +P +    
Sbjct: 512 KGLDPN--QPGIKEYVDVFKSVGVPPHGGGGIGLDRVVAWYLNLPSVHLVCDYPRTPKRL 569

Query: 570 DL 571
             
Sbjct: 570 SP 571


>gi|213621106|ref|ZP_03373889.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 125

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 1/126 (0%)

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
           QDGD  FF A +           R  + ++L + + + +   W++DFP +E ++ E  + 
Sbjct: 1   QDGDMIFFGADNKKVVADALGALRLKLGKDLSLTDEDKWAPLWVIDFPMFE-DDGEGGLT 59

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
             H+PFT P+    S          A  YD+V NG+E+  G +R H  E+    F  +GI
Sbjct: 60  AMHHPFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGI 119

Query: 514 SKEVVE 519
           +++   
Sbjct: 120 NEQEQR 125


>gi|256062285|ref|XP_002570299.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|227294226|emb|CAY19129.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 218

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 6/169 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y++H+CG+L    + S V + GW    R      FL +RD  G  Q+  + +S       
Sbjct: 14  YKSHACGELSTQHINSTVTVCGWPGHCRLSSR--FLVLRDDRGSIQIYCDKNSL---QIP 68

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
              SE VL + G V +R  + +N  + TG+IE+ A+ IEI S +  L           E 
Sbjct: 69  QFNSESVLIVTGKVQARPEKDVNKRMPTGEIEIVAESIEIPSHSSPLSFLPKDAANVNEM 128

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM-IAENFIECSTPILTA 171
            R KYR++DLR  ++ +NI  R+ II  MR  +      ++     +T 
Sbjct: 129 ERLKYRYIDLRSSSMQRNIRFRSSIILQMRNFLCQNNGILDIEMAFITP 177


>gi|256068784|ref|XP_002570922.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238651759|emb|CAZ38607.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 165

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 5/157 (3%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           Y++H+CG+L    + S V + GW+   R      FL +RD  G+ Q+  + +S       
Sbjct: 14  YKSHACGELSTQHINSTVTVCGWLEHCRLSSR--FLVLRDDRGLIQICCDKNSL---QIP 68

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
              SE VL + G V +R  + +N  + TG+IE+ A+ IEILS +  L             
Sbjct: 69  QFNSESVLRVTGKVQARPEKDVNKRMSTGEIEIVAESIEILSHSSPLSFLPKDAANVNGM 128

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN 160
            R KYR++DLR   + +N+  R+ II   R  +   N
Sbjct: 129 ERLKYRYIDLRSLNMQRNMRFRSSIILQTRSFLCQNN 165


>gi|217032013|ref|ZP_03437514.1| hypothetical protein HPB128_187g40 [Helicobacter pylori B128]
 gi|216946323|gb|EEC24929.1| hypothetical protein HPB128_187g40 [Helicobacter pylori B128]
          Length = 76

 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 32/76 (42%), Positives = 50/76 (65%)

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPS 577
           ++ +FG L  A + G PPHGG A G DR++ML+  + ++R+V  FP +Q    LL  +PS
Sbjct: 1   MQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSHSIRDVIAFPKTQKASCLLTDAPS 60

Query: 578 TVSVEQLRELGLRIVE 593
            ++ EQLREL +R+ +
Sbjct: 61  PINEEQLRELHIRLRK 76


>gi|68071695|ref|XP_677761.1| lysine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56498000|emb|CAH95108.1| lysine--tRNA ligase, putative [Plasmodium berghei]
          Length = 598

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 105/231 (45%), Gaps = 9/231 (3%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           +LD  D+    +   N +   ++    + +  ++ +   V     +      + G++ L 
Sbjct: 139 YLDQSDNSKSNENAHNKELDEYKNTHEIYARKIIEVGDFVA---VKGYIRKSLRGELTLH 195

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRM 156
            + I IL+ A  LPLP   +       +++ R+LD   ++  K  +  R  II  +R  +
Sbjct: 196 TKNIYILTKAL-LPLPDKHKGMKDIEYKYRKRYLDFLTNSEQKEKIITRFNIIQEIRRFL 254

Query: 157 IAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYF 214
           + + ++E  TP+L   +    A+ F    +      Y L  AP+ + + L+ SG  ++ F
Sbjct: 255 LKKKYLEVDTPMLQLVAGGASAKPFETHLKSLDLVLY-LRIAPELFLKKLIISGISEKIF 313

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           +++ CFR+E   +   P EF  L++  S+     ++   + +++ V ++ S
Sbjct: 314 ELSKCFRNEGLSTIHNP-EFTMLEIYKSYANYKYMMKFTKKLIKNVAKKIS 363


>gi|225558470|gb|EEH06754.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 581

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 52/274 (18%), Positives = 101/274 (36%), Gaps = 23/274 (8%)

Query: 32  PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT 91
               ++F+ + D YG+ Q +   D      A ++  E  + I G + +   +    +   
Sbjct: 170 SQKDMMFVTLSDGYGLLQCIFTGDLVKSYDAMTLTLETSIAIHGEMRAVPPKNHAYDDR- 228

Query: 92  GQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRII 149
              EL A    I+  A  ++  +      +      +  R L LR +T    +  R   +
Sbjct: 229 ---ELHADFFTIIGRAAGDKEAITTRVAPDSDPHTLYDNRHLVLRGETSSSVMKVRAATL 285

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
            + R     +  +E + P +  +  EG           + ++  L Q+ Q Y +  + S 
Sbjct: 286 RAFRKVFEEKGILEVTPPSMVQTQVEGGSTLFEFDYYGEKAY--LTQSSQLYLETCLPS- 342

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS---- 265
               F I P FR E   + R   E+  ++ E+ F+   D+L+ +E+++  V E       
Sbjct: 343 LGDVFCICPSFRAEKSLTRRHLSEYTHVEAELDFISFTDLLDHLEDMICRVIEVVLSEPL 402

Query: 266 ----------NGNTVSNNFLRICYDDAIRRYGTD 289
                          S  F R+ Y +AI+     
Sbjct: 403 IARFVKQLNPEFTPPSRPFKRMKYSEAIQWLREH 436



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 5/104 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           ++ +   +      D++  G  EI  G +R    + ++ A+   G+        +     
Sbjct: 482 MRKDPEDTCVTESVDVLMPGVGEIVGGSMRMEDWDELMSAYKREGMDPSP----YYWYTD 537

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             + G  PHGG   G++R +  +     VRE  L+P     C  
Sbjct: 538 QRKYGTSPHGGYGIGLERFLAWMCARYTVRECCLYPRFTGRCTP 581


>gi|169852011|ref|XP_001832693.1| asparaginyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|116506218|gb|EAU89113.1| asparaginyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 581

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 54/310 (17%), Positives = 109/310 (35%), Gaps = 72/310 (23%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY---GITQVVANPD-SACFEIAKSVRSEW 69
            + +   + +SGW+  +R    + F  + D     G+  V+   +     ++ +S+ +  
Sbjct: 57  SNHLNGEIEVSGWIKSIRKQKNVAFAVLTDGSSDKGLQAVLVRGEGEEDGDVLRSLTNGA 116

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQK-----IEILSVAEELPLPVFGEREYPESI 124
            + + G ++    +  +        EL  ++     +E+L   +    P+  +    E +
Sbjct: 117 AVRLRGRLVESPGKGQSH-------ELLVERGKEGAVEVLGECDPETYPIQKKLLSNEYL 169

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV-- 182
           R     L  R       +  R+ +   +      + F   +TPILTA+  EGA +     
Sbjct: 170 R-DNVHLRARTSQNAAMLRLRSGLSRRLGEWFENQGFYAVNTPILTANDAEGAGESFRIA 228

Query: 183 --------------------------------------PSRVNQG----SFYALP---QA 197
                                                     NQ      F+  P     
Sbjct: 229 PLPSGHPAASPSPSTPTSSTPSTSPSTSPSTCPSPSPSHPNSNQNQQLEEFFGRPAHLTV 288

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ--------DDI 249
             Q     +A+G  R + ++PCFR E   + R   EF+ L+ E +F++Q         ++
Sbjct: 289 SHQLHLEAIATGLSRVYTLSPCFRAEPSLTGRHLAEFWMLEAEWAFIQQQHQNGGGVHEV 348

Query: 250 LNTMENVLRG 259
            + +E +LRG
Sbjct: 349 CDVVEAMLRG 358



 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 19/146 (13%)

Query: 422 QELGIINC--NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            E  +++         ++ D+P                PF M +  +   +G++     A
Sbjct: 445 HERWLVDELVGGGRPVFVTDYP------------VGVKPFYMRENELREGEGDEGRGTVA 492

Query: 480 FQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
             +DL+  G  E+  G +R    E++ +     G++       +       + G  PH G
Sbjct: 493 C-FDLLVPGVGELVGGSVREERPEILSRKMREAGLADGGA---YKWYEDIRKYGGAPHAG 548

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPM 564
              G +R+V  + G +N+RE   FP 
Sbjct: 549 FGMGFERLVSWVGGVENIRECIPFPR 574


>gi|225560710|gb|EEH08991.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 591

 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 57/300 (19%), Positives = 110/300 (36%), Gaps = 50/300 (16%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            S     +R+ G++  VR      F +I D   I  V A       E A  + +   + I
Sbjct: 54  SSLDNRQIRVRGFIRSVRKQKRFAFAEISDGSTIKSVQA---ILTPEQAARLSTGSAVDI 110

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEE------------------------ 109
            G+          ++      EL A +++I   A+                         
Sbjct: 111 SGVWQPCPPGKEQSH------ELHATEVKITGEADPEVSFVPIPCTACRLSFTDTYTLPN 164

Query: 110 -LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE---NFIECS 165
               P+  +   P+ +R +   L LR          R+  I  +      +    F++  
Sbjct: 165 RQTYPIQKKYHSPDFLR-QIPHLRLRTPFNSLLSRFRSESIFQLGQVFRFQLGGCFVQVQ 223

Query: 166 TPILTASSPEGARDFLVPSRVNQ------GSFYALPQ----APQQYKQLLMASGFDRYFQ 215
            P++T+S  EGA +       ++      G F+  P+    + Q + +   A+     + 
Sbjct: 224 PPLITSSDCEGAGEVFTVVPGDKVDGAEVGEFFRSPKYLTVSSQLHLE-AYAAELGNVWA 282

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVSNNF 274
           ++P FR E   + R   EFY L++EM+FV+  D + + +E+++R + +           F
Sbjct: 283 LSPTFRAEKSDTPRHLSEFYMLEVEMNFVQSVDSLTDIVESLIRDLTKRLYETPVAEEIF 342



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 58/192 (30%), Gaps = 57/192 (29%)

Query: 418 NHIAQELGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES-------- 468
             +  E  I++        ++  +P        KK+     PF M    +          
Sbjct: 405 LQLEHEKFIVDEIGKGRPVFVTHYP--------KKVK----PFYMAPSVVADESSSSSPV 452

Query: 469 -LKGNDLLSIKAF--QYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVEN---- 520
            +  +D L  +     +DL+     E+  G IR      ++Q     G+ K+ +E     
Sbjct: 453 EVLHHDPLQTRETVACFDLLMPEISEVVGGSIREQRLPNLIQNMREHGLLKKKLEAGSDA 512

Query: 521 ----------------------------RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
                                                + G  PHGG   G DR +  L G
Sbjct: 513 DNASSSTHSISESSSPVYPYLQPDEHLGSIQWYADLRRWGSAPHGGFGLGFDRYLGYLAG 572

Query: 553 AKNVREVSLFPM 564
             ++R+V  FP 
Sbjct: 573 VSSLRDVVPFPR 584


>gi|328716991|ref|XP_003246091.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           isoform 3 [Acyrthosiphon pisum]
          Length = 405

 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 57/296 (19%), Positives = 111/296 (37%), Gaps = 32/296 (10%)

Query: 2   HRYRTHSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           H Y + S  D L     G   +L GW   +R     IF+D+ D     ++          
Sbjct: 18  HLYSSCSVKDILNTQPEGCKKKLKGWAKAMRKMKENIFVDLDDGSTHRRLQV-------- 69

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGERE 119
           +    +    L       +      N N    Q+EL A+ I +  S   +   P    + 
Sbjct: 70  VIPKNKIPASLTYGCSFEAEGVLVRNPNY---QLELVAESINVYGSCVVQDGYPFAPRKT 126

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           Y      ++  +  R  T    +  R ++ +++R R   +NFIE + P+L+++  EGA +
Sbjct: 127 YHPEYVRQHLHIRPRTATFSSLLRLRDKLSSAVRNRFAEDNFIEINAPVLSSNDCEGAGE 186

Query: 180 FLVP---------------SRVNQGSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFR 221
                               +    +F+          Q     MA    + + + P FR
Sbjct: 187 VFAVKPDSEKLVKEMISKDHQSPMEAFFNGQTYLTVSGQMHLECMARALTKVYTLGPTFR 246

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            E+ +S     EFY ++ E +F++  +++L+++E     V ++    ++      R
Sbjct: 247 AENSKSRLHLSEFYMIEAEQAFIDNTEELLSSIEKTTSTVVKQLLENSSDEIGHYR 302



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 7/101 (6%)

Query: 470 KGNDLLSIKAFQYDLVC-NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           K ND +++  +  DL+C N  E+  G +R    +V+ +  S  G+     E++       
Sbjct: 309 KDNDPVNMV-YAVDLLCPNVGELCGGSVREDDYDVLKEKLSFAGL-----EDKLHWYLEL 362

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            + G     G   G +R + +LL  +N+++   FP   + C
Sbjct: 363 RKFGNVSTAGFGIGFERFLQVLLDVQNIKDTIAFPRWPHNC 403


>gi|238484395|ref|XP_002373436.1| asparaginyl-tRNA synthetase Slm5, putative [Aspergillus flavus
           NRRL3357]
 gi|220701486|gb|EED57824.1| asparaginyl-tRNA synthetase Slm5, putative [Aspergillus flavus
           NRRL3357]
          Length = 542

 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 52/267 (19%), Positives = 106/267 (39%), Gaps = 26/267 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           S     ++L+G++  VR      F +I D   I  + A    A    A  + +   + I 
Sbjct: 44  SLEDQEIKLNGFIRSVRKQKRFAFAEISDGSTIEPIQAFLRPA---QAAELSTGTAVEIS 100

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G+  +        +      EL    + +L  A+    P+  +   P+ +R +   L +R
Sbjct: 101 GVWKACPPGKEQTH------ELQTTDVNVLGKADPETYPIQKKYHSPDFLR-QIPHLRMR 153

Query: 135 RDTLHKNIVKRTRIINSMRCRMI---AENFIECSTPILTASSPEGARDFLVP-SRVNQGS 190
                     R+  +  +           +++   P++T+S  EGA +      R   G+
Sbjct: 154 TPFSSLLSRFRSECLYQLGNVFRFAPNGGYVQVHPPLITSSDCEGAGETFTVLPREAMGA 213

Query: 191 ------FYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 F+  P+    + Q + +   A+     + I+P FR E   + R   EFY L+ E
Sbjct: 214 QSEGEHFFRAPKYLTVSSQLHLE-AYAAELGNVWTISPMFRAEKSDTPRHLSEFYMLEAE 272

Query: 241 MSFV-EQDDILNTMENVLRGVFEEFSN 266
           M+++ + D + +++E +LR +     +
Sbjct: 273 MNYMHDLDSLTDSVEYILRDLVRRLHD 299


>gi|156089681|ref|XP_001612247.1| asparaginyl-tRNA synthetase family protein [Babesia bovis]
 gi|154799501|gb|EDO08679.1| asparaginyl-tRNA synthetase family protein [Babesia bovis]
          Length = 605

 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/355 (13%), Positives = 105/355 (29%), Gaps = 74/355 (20%)

Query: 21  VRLSGWVHRVRPH--GGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           + ++GW   VR    G + F+ + D       QVV +  +   +      S   + I G 
Sbjct: 95  ISVAGWCKTVRMQNAGKLGFVILNDGSCKADLQVVVHEGAIGHQAVDKCTSGTTIAIRGT 154

Query: 77  VMSRSAETINANIITGQ---------IELSA-----QKIEILSVAEELPLPVFGEREYPE 122
           ++ R ++  +      +          E+         +E++    +       ++   +
Sbjct: 155 LVERPSKPGSFEGKEKEETLEDVARKYEVHVAPLEGHYLEVIGENFDAAKYPIAKKYITQ 214

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
               +   L  R   +   +  R+ +  +          I   TP++T +  EGA +   
Sbjct: 215 EFLREVAHLRPRSYFISSVMRVRSALAMATHIYFQRLGCIYLHTPLITTTDCEGAGELFQ 274

Query: 183 PSRVNQG--------------------------------SFY---ALPQAPQQYKQLLMA 207
            + + +                                  F+   A      Q      A
Sbjct: 275 VTTMLEDCKTLGDLAKKMTAHGDPKKAKILEEMEMDYKKDFFKRKAYLTCSGQLSAENYA 334

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
               + +   P FR E   + R   EF+ ++ E+ F +    ++  E  ++   +   + 
Sbjct: 335 CSMGKVYTFGPTFRAEHSHTSRHLAEFWMVEPEIDFCDLAKNMDIAEEYVQFAIKYALDH 394

Query: 268 N---------------------TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
                                   +  F+RI Y D I      + D +   +  +
Sbjct: 395 CLDDLLYLESIGDKGLVDSLRSFATEKFVRITYTDVIDILMQHEADFQAGRVEID 449



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 4/102 (3%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    +V    E+  G  R    +V+  +    G+      + +      
Sbjct: 507 MRRNDDGKTCAAMDVIVPRFGELVGGSQREERRDVLEDSIKQNGL----CMDDYTWYMDL 562

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              G  PH G   G +R+VML+ G  N+R+V  FP      D
Sbjct: 563 RTYGSIPHSGFGLGFERLVMLVTGVSNIRDVIPFPRYVGKAD 604


>gi|169767506|ref|XP_001818224.1| asparaginyl-tRNA synthetase Slm5 [Aspergillus oryzae RIB40]
 gi|83766079|dbj|BAE56222.1| unnamed protein product [Aspergillus oryzae]
          Length = 542

 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 52/267 (19%), Positives = 106/267 (39%), Gaps = 26/267 (9%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           S     ++L+G++  VR      F +I D   I  + A    A    A  + +   + I 
Sbjct: 44  SLEDQEIKLNGFIRSVRKQKRFAFAEISDGSTIEPIQAFLRPA---QAAELSTGTAVEIS 100

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G+  +        +      EL    + +L  A+    P+  +   P+ +R +   L +R
Sbjct: 101 GVWKACPPGKEQTH------ELQTTDVNVLGKADPETYPIQKKYHSPDFLR-QIPHLRMR 153

Query: 135 RDTLHKNIVKRTRIINSMRCRMI---AENFIECSTPILTASSPEGARDFLVP-SRVNQGS 190
                     R+  +  +           +++   P++T+S  EGA +      R   G+
Sbjct: 154 TPFSSLLSRFRSECLYQLGNVFRFAPNGGYVQVHPPLITSSDCEGAGETFTVLPREAMGA 213

Query: 191 ------FYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 F+  P+    + Q + +   A+     + I+P FR E   + R   EFY L+ E
Sbjct: 214 QSEGEHFFRAPKYLTVSSQLHLE-AYAAELGNVWTISPMFRAEKSDTPRHLSEFYMLEAE 272

Query: 241 MSFV-EQDDILNTMENVLRGVFEEFSN 266
           M+++ + D + +++E +LR +     +
Sbjct: 273 MNYMHDLDSLTDSVEYILRDLVRRLHD 299


>gi|126134111|ref|XP_001383580.1| mitochondrial lysine-tRNA synthetase [Scheffersomyces stipitis CBS
           6054]
 gi|126095729|gb|ABN65551.1| mitochondrial lysine-tRNA synthetase [Scheffersomyces stipitis CBS
           6054]
          Length = 531

 Score =  130 bits (328), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 103/256 (40%), Gaps = 17/256 (6%)

Query: 18  GSFVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G    + G +  +R  G  + F+DIR      QV+A+  S    + +   +   L     
Sbjct: 67  GQTFIVEGKIESIRKSGKAMYFIDIRQDGQQLQVMASNKSMGISVGEFNTAHQSLKKGDF 126

Query: 77  VMSRSAETINANIITGQIELSAQK-IEILSVAEELPLPVFGEREYPESIRFKYRFL-DLR 134
           +M        +    G++ +     + +LS            R          R L  L 
Sbjct: 127 IMCHG---FASVTKVGELTIKVDAPLTLLSPCLNAIP----NRLVDRKNINAQRVLNYLV 179

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVP-----SRVNQ 188
                  I+ ++ II ++R  ++  NF+E +TPIL+ + +   A+ F        +   +
Sbjct: 180 NRDSQTPILVKSYIIQAIRSFLLQNNFLEVNTPILSGAGTGANAKPFATVAHSISTTDAK 239

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            +   L  AP+ + + L+  GF++ F+I   FR+E   S   P EF   +   SF    +
Sbjct: 240 EAAVQLRVAPELWLKKLVIGGFEKIFEIGSNFRNEGIDSTHNP-EFTSCEFYQSFTSLPE 298

Query: 249 ILNTMENVLRGVFEEF 264
           ++   EN+ + + E+ 
Sbjct: 299 LMQMTENMFKYIHEDL 314



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 5/90 (5%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR-----FGGLYRAFQCG 532
            + +++L  NG E  +     +     L  F     +++  ++           +A + G
Sbjct: 433 ISLRFELFINGKEYVNAYEEENSPFDQLAKFKLQQEARDEFKDEEMLIPDLEYIKAMEYG 492

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +PP GG   GIDR+ ML  G   +  V  F
Sbjct: 493 LPPTGGWGCGIDRLAMLFAGVDRIDSVLPF 522


>gi|258568136|ref|XP_002584812.1| aspartyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237906258|gb|EEP80659.1| aspartyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 561

 Score =  130 bits (328), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 56/289 (19%), Positives = 103/289 (35%), Gaps = 29/289 (10%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFEIAKS---VRSEWVLCI 73
             V +   V   R     + FL + +    +  V+   +     + K    +    ++ +
Sbjct: 102 KEVTVIARVDNARVQSAKLAFLMLRQQGKKVQAVIFAQEPISKHMVKWTGGLNVNSIVQV 161

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE----------- 122
            G+V        +A   T  +EL  +KI +++ A +       + E P            
Sbjct: 162 TGIVKKPEIPVNSATYST--MELHIRKIYMIAQAAQQLPMQVKDAERPPPESTEEGQVDA 219

Query: 123 --------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
                     R   R LDL+ +T        + +       M+        T  L+ ++ 
Sbjct: 220 EGAPIVTLKTRLDNRILDLQTETSQAITWISSGVAQLFAEFMLKSGARWIFTSKLSGTAT 279

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
           EG  D        + ++  L Q+PQ  KQ+ +A      F+I P FR E+  + R   EF
Sbjct: 280 EGGSDVFELGYFKRKAY--LSQSPQLGKQMCIAGDMMNVFEIGPVFRAEESNTHRHLTEF 337

Query: 235 YQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
             LD E +F     ++L+  E +L  +  E         + ++  Y  A
Sbjct: 338 IGLDFERTFQRHYHEVLSFAEELLVFILSELKTRYKDQIDIIQKSYPKA 386


>gi|328716987|ref|XP_001945425.2| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           isoform 1 [Acyrthosiphon pisum]
 gi|328716989|ref|XP_003246090.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           isoform 2 [Acyrthosiphon pisum]
          Length = 478

 Score =  130 bits (328), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 57/296 (19%), Positives = 111/296 (37%), Gaps = 32/296 (10%)

Query: 2   HRYRTHSCGD-LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           H Y + S  D L     G   +L GW   +R     IF+D+ D     ++          
Sbjct: 18  HLYSSCSVKDILNTQPEGCKKKLKGWAKAMRKMKENIFVDLDDGSTHRRLQV-------- 69

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGERE 119
           +    +    L       +      N N    Q+EL A+ I +  S   +   P    + 
Sbjct: 70  VIPKNKIPASLTYGCSFEAEGVLVRNPNY---QLELVAESINVYGSCVVQDGYPFAPRKT 126

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
           Y      ++  +  R  T    +  R ++ +++R R   +NFIE + P+L+++  EGA +
Sbjct: 127 YHPEYVRQHLHIRPRTATFSSLLRLRDKLSSAVRNRFAEDNFIEINAPVLSSNDCEGAGE 186

Query: 180 FLVP---------------SRVNQGSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFR 221
                               +    +F+          Q     MA    + + + P FR
Sbjct: 187 VFAVKPDSEKLVKEMISKDHQSPMEAFFNGQTYLTVSGQMHLECMARALTKVYTLGPTFR 246

Query: 222 DEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            E+ +S     EFY ++ E +F++  +++L+++E     V ++    ++      R
Sbjct: 247 AENSKSRLHLSEFYMIEAEQAFIDNTEELLSSIEKTTSTVVKQLLENSSDEIGHYR 302



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 57/149 (38%), Gaps = 26/149 (17%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            EL ++  N  +  +++D+P        K +     PF          K         + 
Sbjct: 353 HELFLVKYNGQKPIFVVDWP--------KDLK----PFYT--------KAIPNNKSLVYA 392

Query: 482 YDLVC-NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+C N  E+  G +R    +V+ +  S  G+     E++        + G     G  
Sbjct: 393 VDLLCPNVGELCGGSVREDDYDVLKEKLSFAGL-----EDKLHWYLELRKFGNVSTAGFG 447

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G +R + +LL  +N+++   FP   + C
Sbjct: 448 IGFERFLQVLLDVQNIKDTIAFPRWPHNC 476


>gi|154286286|ref|XP_001543938.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150407579|gb|EDN03120.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 581

 Score =  130 bits (328), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 52/274 (18%), Positives = 100/274 (36%), Gaps = 23/274 (8%)

Query: 32  PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT 91
               ++F+ + D YG+ Q +   D      A ++  E  + I G + +   +    +   
Sbjct: 170 SQKDMMFVTLSDGYGLLQCIFTGDLVKSYGAMTLTLETSIAIHGEMRAVPPKNHAYDDR- 228

Query: 92  GQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRII 149
              EL A    I+  A  ++  +      +      +  R L LR +T    +  R   +
Sbjct: 229 ---ELHADFFTIIGRAAGDKEAITTRVAPDSDPHTLYDNRHLVLRGETSSSVMKVRAATL 285

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
            + R     +  +E + P +  +  EG           + ++  L Q+ Q Y +  + S 
Sbjct: 286 RAFRKVFEEKGILEVTPPSMVQTQVEGGSTLFEFDYYGEKAY--LTQSSQLYLETCLPS- 342

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS---- 265
               F I P FR E   + R   E+  ++ E+ F+   D+L+ +E+++  V E       
Sbjct: 343 LGDVFCICPSFRAEKSLTRRHLSEYTHVEAELDFISFTDLLDHLEDMICRVIEVVLSEPL 402

Query: 266 ----------NGNTVSNNFLRICYDDAIRRYGTD 289
                          S  F R+ Y +AI      
Sbjct: 403 IARYVKQLNPKFTPPSRPFKRMKYSEAIEWLREH 436



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 6/102 (5%)

Query: 472 NDLLSIK-AFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
            D    +     D++  G  EI  G +R    + ++ A+   G+        +       
Sbjct: 484 KDPEDARVTESVDVLMPGVGEIVGGSMRMEDWDELMSAYKREGMDPSP----YYWYTDQR 539

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G  PHGG   G++R +  +     VRE  L+P     C  
Sbjct: 540 KYGTSPHGGYGIGLERFLAWMCARYTVRECCLYPRFTGRCTP 581


>gi|145609922|ref|XP_001409909.1| hypothetical protein MGG_12574 [Magnaporthe oryzae 70-15]
 gi|145017307|gb|EDK01670.1| hypothetical protein MGG_12574 [Magnaporthe oryzae 70-15]
          Length = 599

 Score =  130 bits (328), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 118/374 (31%), Gaps = 40/374 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHY-----GITQVVANPDSACFEIAKS 64
           +LG + V   V L  ++   R  G  + F+++R+       GI    A       ++ K 
Sbjct: 115 ELGEAQVDKTVHLFAFMQNSRMQGAKMAFVELREKGTWAIQGIVAASAEGKPVSKQMVKW 174

Query: 65  VRSEWV---LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE------------ 109
           V S  V   + ++G+V        +  +     EL   +   +S   +            
Sbjct: 175 VGSLSVEAWVLVEGVVKKAPEPVKSVRVS--GYELHISRFYCISPGPQQLGLTLAAANNG 232

Query: 110 LPLPVFGEREYPESIRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
                    E P         LD      R          R       R  +    F E 
Sbjct: 233 FSNEDAAPEEGPVVTASLNTHLDYFVISKRSAVRSAVADVRETTKELFRSYLKERGFHEF 292

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
            +P +  ++ EG  +       ++  F A  Q+PQ YKQ  +A G  R F I P FR E+
Sbjct: 293 ESPCIIEAASEGGANVFSADYFDKKVFLA--QSPQFYKQYEIAGGRQRVFCIGPVFRAEN 350

Query: 225 PRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
             + R   EF  LDMEM       ++ + +E V   +F E           +R       
Sbjct: 351 SNTPRHMTEFTGLDMEMVIKWHYHEVRDMLEGVFLHIFRELKKQCAEQIETVR--SVFPA 408

Query: 284 RRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF--- 340
             +   +P     +      +         F  + S           A G    R F   
Sbjct: 409 EDFALPEPGKEVRLTFAEGQKLLREEGPEEFRNV-SDFEDMSTPQEKALGEIIRRKFGTD 467

Query: 341 ---CDRMNEWARSQ 351
               D+  E AR  
Sbjct: 468 FYVLDKFPESARPF 481



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 60/334 (17%), Positives = 101/334 (30%), Gaps = 36/334 (10%)

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
           D+  T + + R   +E       S   +    +     +  D  D           + F+
Sbjct: 271 DVRETTKELFRSYLKERGFHEFESPCIIEAASEGGANVFSADYFD----------KKVFL 320

Query: 308 HSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF--WRLDE 365
               + + +         V+ I       N      M E+     +  + + +   R   
Sbjct: 321 AQSPQFYKQYEIAGGRQRVFCIGPVFRAENSNTPRHMTEFTGLDMEMVIKWHYHEVRDML 380

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G    +    K       E +R     +D     F   +P K      + R   A+   
Sbjct: 381 EGVFLHIFRELKKQCAEQIETVRSVFPAED-----FALPEPGK------EVRLTFAEGQK 429

Query: 426 IINCNC-FEFCWIMDF-PFYEWNEEEKKIDFAHNPFT-------MPQGGMESLKGNDLLS 476
           ++      EF  + DF       E+           T        P+         D  +
Sbjct: 430 LLREEGPEEFRNVSDFEDMSTPQEKALGEIIRRKFGTDFYVLDKFPESARPFYTCEDPEN 489

Query: 477 IK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC-GMP 534
            +    YD    G EI SGG R H  E +       G+          G    F+  G+P
Sbjct: 490 RELTNAYDFFMRGQEIMSGGQRIHKPEEIEARMRRKGLDPNS--KGLKGYVNTFRQAGVP 547

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           PHGG   G+DR+V   L    V+  + +P + N 
Sbjct: 548 PHGGGGIGLDRVVQFFLNLSTVQYAAFYPRTPNR 581


>gi|85713399|ref|ZP_01044402.1| asparaginyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85692778|gb|EAQ30773.1| asparaginyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 349

 Score =  130 bits (328), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 89/277 (32%), Gaps = 41/277 (14%)

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                +Y  L  R +     +  R  +  ++        ++  STPI+T S  EGA +  
Sbjct: 1   MEYLREYAHLRPRTNVTGAVMRVRNTLSQAIHRFFHEHGYLWVSTPIITTSDCEGAGEMF 60

Query: 182 VPSRVNQG--------------SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             S ++                 F+   A      Q      A    + +   P FR E+
Sbjct: 61  RVSTLDLMNVPKTEQGNVDFSQDFFGKEAFLTVSGQLNVESYACSLSKVYTFGPTFRAEN 120

Query: 225 PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------------ 266
             + R   EF+ ++ E++F + DD+ +  E++L+ VF+                      
Sbjct: 121 SNTSRHLSEFWMVEPEVAFADLDDVAHLAEDMLKYVFKAVLEERPDDMAFFEQRINKDVV 180

Query: 267 ---GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
                 V ++F+ + Y DAI            P+      +     E  +  + +     
Sbjct: 181 ERLTRMVDSDFVHMDYTDAIEILKNCGKKFEYPVEWG--VDLQSEHERYLAEEHVGAPVI 238

Query: 324 YEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            + +    K     R   D     A     PG+  I 
Sbjct: 239 LKNYPRDIKAFYM-RQNKDGKTVAAMDVLAPGIGEII 274



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D++  G  EI  G  R    +V+ Q  + + +  E  E          + G  PH G   
Sbjct: 264 DVLAPGIGEIIGGSAREERLDVLDQRIAEMDLPAEEYE----FYRDLRRYGTVPHAGFGL 319

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G +R+V  + G +N+R+V  FP +    
Sbjct: 320 GFERLVSYVTGMQNIRDVIPFPRAPKSA 347


>gi|84996825|ref|XP_953134.1| lysyl t-RNA synthetase [Theileria annulata strain Ankara]
 gi|65304130|emb|CAI76509.1| lysyl t-RNA synthetase, putative [Theileria annulata]
          Length = 679

 Score =  130 bits (328), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 62/308 (20%), Positives = 114/308 (37%), Gaps = 21/308 (6%)

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           N +  C E+   +    V+ + G V              G+I +  +KI+ LS    +P 
Sbjct: 262 NQEYPCKEVVDLIDIGDVIELYGNV---------KKTNLGEISIIPKKIKFLSKCL-IPP 311

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTA 171
           P           R++ R LDL  + L +  V KR ++I+ +R  +    F+E  TPIL  
Sbjct: 312 PSKQHGLKDVETRYRLRHLDLLTNELTRYQVLKRFQVISKIRKFLTEREFVEVDTPILQH 371

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            +     +              L  AP+   K++ M     + F+I  CFR+E   S R 
Sbjct: 372 YACGDLAEPFETYYKRLNEKVKLRIAPEFSIKKIFMGLPLTKVFEIGKCFRNEGS-SLRH 430

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
             EF  +++     + + ++  +E+++  +     + ++V  N   I +  +        
Sbjct: 431 SPEFTMIEIYQKMADYNTMIKLLEDLINYLLSYGFDEDSVCKNVFEIKWRSS------RF 484

Query: 291 PDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS 350
            DL       ++T +        F ++LS      +  I +             NE    
Sbjct: 485 SDLIKEYTGIDITLYSKEELMDKFKELLSKTDNTRLEQIESSMEVITWGSIS--NEIFEK 542

Query: 351 QGQPGLAY 358
              P L Y
Sbjct: 543 FVVPNLKY 550


>gi|68061405|ref|XP_672702.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56489988|emb|CAI01907.1| hypothetical protein PB300444.00.0 [Plasmodium berghei]
          Length = 426

 Score =  130 bits (327), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 102/230 (44%), Gaps = 7/230 (3%)

Query: 38  FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
           +LD  D+    +   N +   ++    + +  ++ +   V     +      + G++ L 
Sbjct: 60  YLDQSDNSKSNENAHNKELDEYKNTHEIYARKIIEVGDFVA---VKGYIRKSLRGELTLH 116

Query: 98  AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRM 156
            + I IL+ A  LPLP   +       +++ R+LD   ++  K  +  R  II  +R  +
Sbjct: 117 TKNIYILTKAL-LPLPDKHKGMKDIEYKYRKRYLDFLTNSEQKEKIITRFNIIQEIRRFL 175

Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQ 215
           + + ++E  TP+L   +   +         +      L  AP+ + + L+ SG  ++ F+
Sbjct: 176 LKKKYLEVDTPMLQLVAGGASAKPFETHLKSLDLVLYLRIAPELFLKKLIISGISEKIFE 235

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           ++ CFR+E   +   P EF  L++  S+     ++   + +++ V ++ S
Sbjct: 236 LSKCFRNEGLSTIHNP-EFTMLEIYKSYANYKYMMKFTKKLIKNVAKKIS 284


>gi|240280743|gb|EER44247.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus H143]
 gi|325089000|gb|EGC42310.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 591

 Score =  130 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 57/300 (19%), Positives = 111/300 (37%), Gaps = 50/300 (16%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            S     +R+ G++  VR      F +I D   I  V A       E A  + +   + I
Sbjct: 54  SSLDNRQIRVRGFIRSVRKQKRFAFAEISDGSTIKSVQA---ILTPEQAARLSTGSAVDI 110

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEE------------------------ 109
            G+          ++      EL A +++I   A+                         
Sbjct: 111 SGVWQPCPPGKEQSH------ELHATEVKITGEADPEVSFVPIPCTACRLSFTDTYTLPN 164

Query: 110 -LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE---NFIECS 165
               P+  +   P+ +R +   L LR          R+  I  +      +   +F++  
Sbjct: 165 QQTYPIQKKYHSPDFLR-QIPHLRLRTPFNSLLSRFRSESIFQLGQVFRFQLGGSFVQVQ 223

Query: 166 TPILTASSPEGARDFLVPSRVNQ------GSFYALPQ----APQQYKQLLMASGFDRYFQ 215
            P++T+S  EGA +       ++      G F+  P+    + Q + +   A+     + 
Sbjct: 224 PPLITSSDCEGAGEVFTVVPGDKVDGAEVGEFFRSPKYLTVSSQLHLE-AYAAELGNVWA 282

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEFSNGNTVSNNF 274
           ++P FR E   + R   EFY L++EM+FV+  D + + +E+++R + +           F
Sbjct: 283 LSPTFRAEKSDTPRHLSEFYMLEVEMNFVQSVDSLTDIVESLIRDLTKRLYETPVAEEIF 342



 Score = 57.4 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 21/52 (40%)

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +  +             + G  PHGG   G DR +  L G  ++R+V  FP 
Sbjct: 533 LQPDEHLGSIQWYADLRRWGSAPHGGFGLGFDRYLGYLAGVSSLRDVVPFPR 584


>gi|218190024|gb|EEC72451.1| hypothetical protein OsI_05793 [Oryza sativa Indica Group]
          Length = 490

 Score =  130 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 55/244 (22%), Positives = 86/244 (35%), Gaps = 31/244 (12%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANP--------DSACF 59
              LG    G  VR+ G  H VR  G  + FL +R      Q V           D+   
Sbjct: 45  VAALGPDVAGRAVRVRGAAHAVRAVGRRVAFLVLRQGSSTVQCVVGGGGGGGGGGDAGVA 104

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE-- 117
             A  +  E V+ + G+V               ++E+  +K+  +S A         +  
Sbjct: 105 RFAAGLSRESVVDVAGVVSLPREPVRGTT--QQEVEIQVKKLYCISKATPNLPISVDDAA 162

Query: 118 ----------------REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENF 161
                               +  R  +R +DLR          +  I N  R  +++E F
Sbjct: 163 RSEEDVVKAKAAGEQLVHVGQDKRLDFRVIDLRTPANQAIFRVQCEIENIFRQVLLSEGF 222

Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           +   TP L   S EG            G    L Q+PQ +KQ+ +  GF+R F++ PC  
Sbjct: 223 VGIHTPKLIGGSSEGGAAVFKLDYN--GQPACLAQSPQLHKQMAICGGFERVFEVGPCPA 280

Query: 222 DEDP 225
            + P
Sbjct: 281 QKTP 284



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 61/162 (37%), Gaps = 22/162 (13%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
                D      ++LG +    ++     DF          +   A  PF          
Sbjct: 351 VEAMGDLNTESEKKLGELVHTKYD----TDFYML------CRYPSAVRPFYTMPCSD--- 397

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              D     +  +D+   G EI SG  R H+ EV+ +     GI    +         AF
Sbjct: 398 ---DPR--YSNSFDVFVRGEEIISGAQRVHVPEVLARQAEERGIDVGSI----AAYVDAF 448

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G PPHGG   G++R+VML  G  N+R+ SLFP      + 
Sbjct: 449 RYGAPPHGGFGVGLERVVMLFCGLGNIRKASLFPRDPRRLNP 490


>gi|47215828|emb|CAF96791.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3152

 Score =  130 bits (326), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 85/254 (33%), Gaps = 18/254 (7%)

Query: 90   ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRII 149
              G  EL     E++ +A           +    ++   R + +R + + K +  R+ + 
Sbjct: 2503 APGGHELHCDFWELIGLAPAGGADNLLNEDSDVDVQLNNRHMLIRGENVSKILRVRSTVT 2562

Query: 150  NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
               R    +  + E + P L  +  E        +    G    L Q  Q Y +  +   
Sbjct: 2563 QCFRDHFFSRGYYEITPPTLVQTQVEDGYTLFKLNYF--GEQVYLTQCSQLYLETCIP-A 2619

Query: 210  FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN--- 266
                F IA  +R E  R+ R   EF  ++ E  F+  DD+LN +E+++  V +       
Sbjct: 2620 LGDTFCIAQSYRAEQSRTRRHLSEFTHVEAECPFISFDDLLNGLEDLICDVVDRVLKSPA 2679

Query: 267  ----------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPI--IMHNVTEHFVHSEFRVF 314
                             F R+ Y +AI           +        + E +      + 
Sbjct: 2680 GGLLHDINPTFKPPKRPFRRMNYTEAIEWLREHDIKKDDGTFYEFGEIIELYPAETLDLM 2739

Query: 315  SKILSVNPGYEVWA 328
            +K +   P + +  
Sbjct: 2740 TKEMMSVPCWMLIG 2753


>gi|261187497|ref|XP_002620171.1| asparaginyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239594184|gb|EEQ76765.1| asparaginyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239606281|gb|EEQ83268.1| asparaginyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
 gi|327356530|gb|EGE85387.1| asparaginyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 581

 Score =  130 bits (326), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 51/274 (18%), Positives = 101/274 (36%), Gaps = 23/274 (8%)

Query: 32  PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT 91
               ++F+ + D YG+ Q + + D        ++  E  + I G + +   +    +   
Sbjct: 170 SQKDMMFVTLSDGYGLLQCIFSGDLVKTYDMMTLTLETSIAIHGEMRAVPPKNHAYDDR- 228

Query: 92  GQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRII 149
              EL A    I+  A  ++  +      +      +  R L LR +T    I  R   +
Sbjct: 229 ---ELHADFFTIIGRAAGDKEAITTRVAPDSDPHTLYDNRHLVLRGETSSSIIKVRAATL 285

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
            + R     +  +E + P +  +  EG           + ++  L Q+ Q Y +  + S 
Sbjct: 286 RAFRKVFEEKGMLEVTPPSMVQTQVEGGSTLFEFDYYGEKAY--LTQSSQLYLETCLPS- 342

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS---- 265
               F + P FR E   + R   E+  ++ E+ F+   D+L+ +E+++  V +       
Sbjct: 343 LGDVFCVCPSFRAEKSLTRRHLSEYTHVEAELDFISFTDLLDHLEDMICRVIDTVLSEPL 402

Query: 266 ----------NGNTVSNNFLRICYDDAIRRYGTD 289
                     N    S  F R+ Y +AI      
Sbjct: 403 IARYVKELNPNFIPPSRPFRRMKYAEAIEWLREH 436



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                   F M +   E L+  + + +      L+    EI  G +R    + ++ A+  
Sbjct: 472 HFPVEIKAFYMKK-DPEDLRVTESVDV------LMPGVGEIVGGSMRMEDWDELMAAYKR 524

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+        +       + G  PHGG   G++R +  +     VRE  L+P     C 
Sbjct: 525 EGMDPSP----YYWYTDQRKYGTSPHGGYGIGLERFLAWMCARYTVRECCLYPRFTGRCT 580

Query: 571 L 571
            
Sbjct: 581 P 581


>gi|213622455|ref|ZP_03375238.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 81

 Score =  130 bits (326), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 30/78 (38%), Positives = 46/78 (58%)

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
             +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+  +PS 
Sbjct: 2   REKFGFLLDALKYGTPPHVGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSF 61

Query: 579 VSVEQLRELGLRIVENPK 596
            +   L ELG+++V+  +
Sbjct: 62  ANQAALTELGIQVVKKAE 79


>gi|145611736|ref|XP_369083.2| hypothetical protein MGG_00161 [Magnaporthe oryzae 70-15]
 gi|145018989|gb|EDK03268.1| hypothetical protein MGG_00161 [Magnaporthe oryzae 70-15]
          Length = 537

 Score =  130 bits (326), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 25/268 (9%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G+ D+   +   G +  +R HG +IFLDI   Y   QV  +           ++ +    
Sbjct: 24  GIEDIDEPLTAKGRIMNIRSHGSLIFLDIAGDYETLQVAIS--------YAFLKEKSPAE 75

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIE------ILSVAEELPLPVFGEREYP----- 121
           ++G V  R  +   A +  G   ++A  +E      +   A   P         P     
Sbjct: 76  MEG-VSLRDFKAKGAQLQRGDWVVAAGHMEADRRDGLRMRAHNFPSIRAKALNIPPLSVI 134

Query: 122 -ESIRFKYRFLDLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-AR 178
            + +  + R LDL  + +    +  R RII ++R  +    ++E  TP+L  S+    AR
Sbjct: 135 DDGLMSQSRHLDLMLNKVSVDALRARARIIQTVRRTLDDRGYVEVQTPLLAGSAGGATAR 194

Query: 179 DFLVPSR-VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            F   +         AL  AP+ + + L+  G DR +++ PCFR+E   +   P EF   
Sbjct: 195 PFATTATEFGSSQHLALRVAPELWLKRLVMGGMDRVYEVGPCFRNEGVDATHNP-EFTMC 253

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEEFS 265
           +   ++ + D ++   E +++ +  +  
Sbjct: 254 EFYEAWADLDHLMLMTERLMQLISSDLK 281



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 4/116 (3%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           +     H+P  M      S          A + +   NG E+A+       ++   + F+
Sbjct: 398 RAFFVTHHPACMAPLA-RSGVCPITKQKVALRAEFFVNGVELANMYEEEFEADEQERKFN 456

Query: 510 NVGISKEVV---ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                +       +       A + GMPP GG   GIDR+ ML  G   +R+V  F
Sbjct: 457 AAARLRRDAVGLNSDEASYVLAMRGGMPPTGGWGCGIDRLAMLFTGKPRIRDVLTF 512


>gi|255731784|ref|XP_002550816.1| hypothetical protein CTRG_05114 [Candida tropicalis MYA-3404]
 gi|240131825|gb|EER31384.1| hypothetical protein CTRG_05114 [Candida tropicalis MYA-3404]
          Length = 400

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 103/255 (40%), Gaps = 19/255 (7%)

Query: 23  LSGWVHRVRPHGGII-FLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLVMS 79
           L G +  +R  G  + F+DI       Q++A         E   S+   + +        
Sbjct: 78  LEGRILSIRKAGRAMYFIDIIQDDVNVQIMATNKLMEMNKEEFDSIHGFFKIGD-----Y 132

Query: 80  RSAETINANIITGQIELSAQK-IEILSVAEELPLPVFGEREYPESIRFKYRFL-DLRRDT 137
            +A    +   TG++ L   + IE+L+ +          R     +    R L  L    
Sbjct: 133 IAARGNVSRTKTGELTLKLNRPIEMLTPSLNQIP----NRLVDRGLINNNRVLNYLVNPE 188

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQ 196
               I+ ++++I ++R  ++   F+E STPIL+   +   A  F+   +  Q     L  
Sbjct: 189 SKNPIIIKSKVIQAIRKFLMDREFLEVSTPILSGKGTGANATPFITTFKSQQVH---LRV 245

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           AP+ + +  +  GFD+ F+I   FR+E       P EF   +   ++   +++++  E +
Sbjct: 246 APELWLKKFVIGGFDKVFEIGSNFRNEGIDMTHNP-EFSTCEFYQAYTSLEELMDLTEEL 304

Query: 257 LRGVFEEFSNGNTVS 271
            + VF +       S
Sbjct: 305 FKYVFAKVGGVECDS 319


>gi|322695478|gb|EFY87285.1| asparaginyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 527

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 71/346 (20%), Positives = 119/346 (34%), Gaps = 30/346 (8%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
                G+ VR+ G VHR R    ++F+ +RD YG  QVV +   A    A ++  E  + 
Sbjct: 136 DAESKGTRVRVLGRVHRERKQKDVLFVTLRDGYGFMQVVISGKLAKTYDALTLTRETSME 195

Query: 73  IDGLVMSRSAETINANIITGQIELSA------QKIEILSVAEELPLPVFGEREYPESIRF 126
           I G +    A            EL A      +    +   + +   V    E+  +   
Sbjct: 196 IFGEMREVPAGARAPLNR----ELHADFYKIPKHWRAVGGDDAITNRVTASTEH--ATLL 249

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR +     ++ R  +  +           + S P L  +  EG          
Sbjct: 250 DLRHLTLRGENASSVLLVRDALEYAFNRTYHEARIRKVSPPALVQTQVEGGSTLFKFDYY 309

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
              +F  L Q+ Q Y +  + S     + I   FR E   + R   EF  ++ E+ F++ 
Sbjct: 310 GADAF--LTQSSQLYLETCLPS-MGSVYCIEKSFRAEKSLTRRHLSEFTHIEAELDFIDF 366

Query: 247 DDILNTMENVLRGVFEEFSNGNT--------------VSNNFLRICYDDAIRRYGTDKPD 292
           DD+L  +E+++  V E                         FLR+ Y DAI+        
Sbjct: 367 DDLLAHLESLICRVLELVLEDPMIAGYIKTLNPEFKVPERPFLRMKYSDAIQWLIDHDIP 426

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
                  HN  +    +  R  + I++       +    K     R
Sbjct: 427 NEEGNP-HNFGDDIAEAAERKMTDIINKPVFITHFPAHIKAFYMKR 471


>gi|322705019|gb|EFY96608.1| asparaginyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 527

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 120/354 (33%), Gaps = 36/354 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
                G+ VR+ G VHR R    ++F+ +RD YG  QVV +   A    A ++  E  + 
Sbjct: 136 DAESKGTRVRVFGRVHRERKQKDVLFVTLRDGYGFMQVVISGKLAKTYEALTLTRETSME 195

Query: 73  IDGLVMSRSAETINANIITGQIELSA------QKIEILSVAEELPLPVFGEREYPESIRF 126
           I G +    A            EL A      +    +   + +   V    E+  +   
Sbjct: 196 IFGEMREVPAGARAPLNR----ELHADFYKIPKHWRAVGGDDAITNRVTASTEH--ATLL 249

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
             R L LR +     ++ R  +  +           + S P L  +  EG          
Sbjct: 250 DLRHLTLRGENASSVLLVRDAMEYAFNRAYHEARIRKVSPPALVQTQVEGGSTLFKFDYY 309

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
              +F  L Q+ Q Y +  + S     + I   FR E   + R   EF  ++ E+ F+  
Sbjct: 310 GADAF--LTQSSQLYLETCLPS-LGSVYCIEKSFRAEKSLTRRHLSEFTHIEAELDFINF 366

Query: 247 DDILNTMENVLRGVFEEFSNGNT--------------VSNNFLRICYDDAIRRYGTDKPD 292
           DD+L  +E ++  V E                         F+R+ Y DAI+       D
Sbjct: 367 DDLLTHLETLICRVLELVLEDPMIAGYIKTLNPEFKVPERPFMRMRYSDAIKWL----ID 422

Query: 293 LRNPIIM---HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
              P      HN  +    +  R  + I++       +    K     R   D 
Sbjct: 423 HEIPNEEGNPHNFGDDIAEAAERKMTDIINKPIFITHFPAHIKAFYMKRDPEDD 476


>gi|255562234|ref|XP_002522125.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223538724|gb|EEF40325.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 328

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 91/327 (27%), Positives = 149/327 (45%), Gaps = 45/327 (13%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY-----------GITQVVANPDSACFEI 61
            V+D G  V L GWV   R HGG+ FL++RDH            G+   + +       I
Sbjct: 2   SVNDAGKRVLLCGWVALYRVHGGLTFLNLRDHTVRRIETQSHLMGVVTTLPDEFPDARSI 61

Query: 62  AKSVRSEWVLCIDGLVMSRSAETI----NANIITGQIELSAQKIEILSVAEELPLPVFGE 117
              +R ++V+  + + +  +  +        I+ G + + +  + + S+ E   +    +
Sbjct: 62  INDLRLQYVVAAENVQIPNAVRSKLLHQMIRIVGGLLFIESTVVSLSSILETTLVTALPD 121

Query: 118 REYPESIRFKYRFLDLRRDTLHKNI-VKRTRIINSMRCRMIAENFIEC------------ 164
                         DLR   +     V R+R   S+  +M      E             
Sbjct: 122 EFPDARSIMN----DLRLQYVVAVEGVVRSRPHESVNKKM-KTGLTEVAAENVQILNAVV 176

Query: 165 -STPILTASSPEGARDFLV--------PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
              P L  ++ + A+D +                +FY+LPQ PQ +KQ+LM SGFD+Y+Q
Sbjct: 177 SKLPFLV-TTSDDAKDSIKEEIPLSQSIVYSEARNFYSLPQIPQLFKQMLMVSGFDKYYQ 235

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            A CFRDED R+DR P EF QLDME++    +D+L   E+V+R VF +      + N F 
Sbjct: 236 FARCFRDEDLRADRQP-EFTQLDMELALTPLEDMLKLNEDVIRKVFLKIKGV-QLPNPFP 293

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNV 302
           R+ Y +A+ RYG+D+ D R  + + ++
Sbjct: 294 RLAYAEAMSRYGSDRSDTRFDLELKDL 320


>gi|281206109|gb|EFA80298.1| hypothetical protein PPL_07128 [Polysphondylium pallidum PN500]
          Length = 547

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/279 (20%), Positives = 124/279 (44%), Gaps = 20/279 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDI-RDHYGITQVVANPDSACFE- 60
           +R     DL  +   + + +   + +   HG  ++F+ + + H+ I  +    +S   + 
Sbjct: 73  FRYVKIKDLDPTYHNNVITMRARISQTSTHGKSLVFIGLRQQHFRIQALAVERESLVSKQ 132

Query: 61  ---IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
                + +  E ++ ++  V+   A+ I  +     +ELS +++ ++S ++ L + +   
Sbjct: 133 MIRFIRQLNEESIVDLEATVIYDPAKQIKKSTHP-NLELSIKRLYVISKSKPLEISLEDL 191

Query: 118 RE---------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                       P S R  Y+ LDLR          ++++ N +  R++ E FIE  +P 
Sbjct: 192 SLGSSESQAYSVPLSTRTNYKTLDLRVSAHQSIFQLQSQVTNIIYNRLVKEKFIEIHSPK 251

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L   + +        +   + +  A   +   YKQ+ +AS F+R F+I P +R E   + 
Sbjct: 252 LLKWNLDNWSS-FSLNYFGETAHLA--TSNILYKQMAIASDFNRIFEIGPIYRKEHASTH 308

Query: 229 RLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSN 266
           R   EF ++D+EM   E   ++L+ ++ +   +FE  + 
Sbjct: 309 RHLCEFTRIDIEMRIEEHYHELLDQIDQMFIEIFERLNK 347



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 5/89 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR-----FGGLYRAFQCGM 533
              +     G EIA G  R H    +  A +   I   ++ ++     +       + G 
Sbjct: 450 TNSFVYYIRGQEIAKGSQRIHDHNQLKLAINEQQIKYNLLRSQDEINCYLDFLGTLKYGC 509

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            P+ G + G++ ++M  LG  N+R  S++
Sbjct: 510 YPYAGCSIGLESLLMAYLGIPNIRTCSMY 538


>gi|70999878|ref|XP_754656.1| asparaginyl-tRNA synthetase Slm5 [Aspergillus fumigatus Af293]
 gi|66852293|gb|EAL92618.1| asparaginyl-tRNA synthetase Slm5, putative [Aspergillus fumigatus
           Af293]
 gi|159127670|gb|EDP52785.1| asparaginyl-tRNA synthetase Slm5, putative [Aspergillus fumigatus
           A1163]
          Length = 572

 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/293 (19%), Positives = 109/293 (37%), Gaps = 39/293 (13%)

Query: 9   CGD-LGVSDVG------SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--NPDSACF 59
           C + L  S  G        ++++G+V  VR      F +I D   I  + A   P  A  
Sbjct: 31  CAEVLRKSQAGSSSYEDQEIKINGFVRSVRKQKRFAFAEITDGSTIEPLQAFLKPAQAAG 90

Query: 60  EIAKSVRSEWVLCI-----------DGLVMSRSA-ETINANIITGQIELSAQKIEILSVA 107
            + +   + W+L +            G  +  S              EL   +++I+  A
Sbjct: 91  YVERVAMTVWILRLELSADGGCRLSTGTAVEISGLWKACPPGKEQTHELQTTEVKIVGQA 150

Query: 108 EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN---FIEC 164
           E    P+  +   P+ +R     L LR          R+  +  +           +++ 
Sbjct: 151 EPETYPIQKKYHSPDFLR-SIPHLRLRTPFNSVLSRFRSECLYQLGNVFRDAPNGGYVQV 209

Query: 165 STPILTASSPEGARDFLVP--------SRVNQGSFYALPQ----APQQYKQLLMASGFDR 212
             P++T+S  EGA +             +     F+  P+    + Q + +   A+    
Sbjct: 210 QPPLITSSDCEGAGETFTVLPRETIMDPKSEGNHFFRAPKYLTVSSQLHLE-AYAAELGN 268

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEF 264
            + I+P FR E   + R   EFY L+ EM+F++  D + + +E V+R +    
Sbjct: 269 VWAISPTFRAEKSDTPRHLSEFYMLEAEMNFMDDLDSLTDAVEYVVRDLTRRL 321



 Score = 70.5 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 49/171 (28%), Gaps = 46/171 (26%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND---LLSIKAFQYDLVCNGF 489
           +  ++ D+P             A  PF M    +   K  D        A  +DL+    
Sbjct: 414 QPVFVTDYP------------KAIKPFYMAPSHVAPGKEEDIRAPGETVAC-FDLLLPEV 460

Query: 490 -EIASGGIRNHM-SEVMLQAFSN----------------------------VGISKEVVE 519
            E+A G +R H    ++     +                              +      
Sbjct: 461 SEVAGGSLREHRLPNIIQNMRDHGLIKQRLYPAAGAGETPTTQTAPEQPLYPHLQPYEDL 520

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                     + G  PHGG   G DR +  L G  +VR+V  FP      D
Sbjct: 521 GHLQWYADLRRWGSAPHGGFGLGFDRFLSYLAGVSSVRDVVAFPRYFGRAD 571


>gi|325094255|gb|EGC47565.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 581

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/328 (17%), Positives = 111/328 (33%), Gaps = 28/328 (8%)

Query: 32  PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT 91
               ++F+ + D YG+ Q +   D      A ++  E  + I G + +   +    +   
Sbjct: 170 SQKDMMFVTLSDGYGLLQCIFTGDLVKSYDAMTLTLETSIAIHGEMRAVPPKNHAYDDR- 228

Query: 92  GQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRII 149
              EL A    I+  A  ++  +      +      +  R L LR +T    +  R   +
Sbjct: 229 ---ELHADFFTIIGRAAGDKEAITTRVAPDSDPHTLYDNRHLVLRGETSSSVMKVRAATL 285

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
            + R     +  +E + P +  +  EG           + ++  L Q+ Q Y +  + S 
Sbjct: 286 RAFRKVFEEKGILEVTPPSMVQTQVEGGSTLFEFDYYGEKAY--LTQSSQLYLETCLPS- 342

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS---- 265
               F I P FR E   + R   E+  ++ E+ F+   D+L+ +E+++  V E       
Sbjct: 343 LGDVFCICPSFRAEKSLTRRHLSEYTHVEAELDFISFTDLLDHLEDMICRVIEVALSEPL 402

Query: 266 ----------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNP---IIMHNVTEHF--VHSE 310
                          S  F R+ Y +AI+                   ++ E      ++
Sbjct: 403 IARYVKQLNPEFTPPSRPFKRMKYSEAIQWLREHDILNEEGNQHTFGDDIAEAAERKMTD 462

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNR 338
                  L+  P         K     R
Sbjct: 463 MMNMPIFLTHFPVEIKAFYMRKDPEDTR 490



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                   F M +   E  +  + + +      L+    EI  G +R    + ++ A+  
Sbjct: 472 HFPVEIKAFYMRK-DPEDTRVTESVDV------LMPGVGEIVGGSMRMEDWDELMSAYKR 524

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+        +       + G  PHGG   G++R +  +     VRE  L+P     C 
Sbjct: 525 EGMDPSP----YYWYTDQRKYGTSPHGGYGIGLERFLAWMCARYTVRECCLYPRFTGRCT 580

Query: 571 L 571
            
Sbjct: 581 P 581


>gi|115384700|ref|XP_001208897.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114196589|gb|EAU38289.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 527

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/318 (16%), Positives = 116/318 (36%), Gaps = 34/318 (10%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
              ++L+G+V  VR      F +I D   +  + A    A    A  + +   + I G+ 
Sbjct: 47  DQEIKLNGFVRSVRKQKRFAFAEISDGSTVEPLQAFLKPA---QAAELSTGTAVEISGIW 103

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
            +        +      EL A +++I+  A+        ++ +      +   L +R   
Sbjct: 104 KACPPGKEQTH------ELQATEVKIVGEADP------EKKYHSPEFLRQIPHLRIRTPF 151

Query: 138 LHKNIVKRTRIINSMRCRMIAEN---FIECSTPILTASSPEGARD-FLVPSRVNQG---- 189
                  R+  +  +     +     F++   P++T+S  EGA + F V  R   G    
Sbjct: 152 NSLLSRFRSECLYQLGNVFRSAPNGGFVQVHPPLITSSDCEGAGETFTVVPREAMGSQQP 211

Query: 190 ---SFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
               F+  P+    + Q + +   A+     + ++P FR E   + R   EFY L+ E++
Sbjct: 212 DGEHFFRAPKYLTVSSQLHLE-AYAAELGNVWTMSPMFRAEKSDTPRHLSEFYMLEAEVN 270

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           F+     L+ +  ++  +  + +     +     I         G + PD  N ++    
Sbjct: 271 FI---YDLDALTGLVEHLLRDLTRRLYDTPVGQEILAAKRSGEAGQEHPDESNAVLRQRW 327

Query: 303 TEHFVHSEFRVFSKILSV 320
            +      +   +   ++
Sbjct: 328 QDMMDGPRWARITYTDAI 345



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 51/158 (32%), Gaps = 36/158 (22%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              ++ D+P             A  PF M      +    D ++     +DL+     E+
Sbjct: 385 RPVFVTDYP------------KAIKPFYMAPSDASTAPPGDTVAC----FDLLLPEVSEV 428

Query: 492 ASGGIRNHM-SEVMLQAFSNVGISKEVVEN------------------RFGGLYRAFQCG 532
           A G +R H   +++     +  I     ++                           + G
Sbjct: 429 AGGSLREHRLPQIIQNMRDHFLIKTRDEQSSPDAEPLYPHLLPGEDLGHLQWYADLRRWG 488

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             PHGG   G DR +  L G  +VR+V  FP      D
Sbjct: 489 TAPHGGFGLGFDRFLGFLAGVSSVRDVVSFPRYFGRAD 526


>gi|70927070|ref|XP_735975.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56510118|emb|CAH87400.1| hypothetical protein PC302445.00.0 [Plasmodium chabaudi chabaudi]
          Length = 267

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 84/229 (36%), Gaps = 4/229 (1%)

Query: 118 REYPESIRFKYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILT-ASSPE 175
                 IR++ R+LDL  +   +N  + RT+IIN +R  +  + FIE  TP +   +   
Sbjct: 6   GLKDTEIRYRQRYLDLIVNESTRNIFITRTKIINFLRSFLNDQGFIEVETPSMNLVAGGA 65

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            AR F+          Y L  A +   ++L+  G DR ++I   FR+E   +   P EF 
Sbjct: 66  SARPFITHHNDLDIDLY-LRIATELPLKMLIVGGLDRVYEIGKVFRNEGIDNTHNP-EFT 123

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
             +   ++ +  D++   E     +         +  N      D     +    P +  
Sbjct: 124 SCEFYWAYADYYDLIKWSEEFFSKLVYHLFGTYKILYNKDGPEKDPIEIDFTPPYPKISL 183

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
              +  +T+  +   F     I  +    +   I            D++
Sbjct: 184 VEELEKITKVKLEQPFDSPETINKMINIIKENNIEMPNPPTAAKLLDQL 232


>gi|325973201|ref|YP_004250265.1| lysyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|325989644|ref|YP_004249343.1| Lysyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574729|emb|CBZ40385.1| Lysyl-tRNA synthetase [Mycoplasma suis]
 gi|323651803|gb|ADX97885.1| lysyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 481

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 108/249 (43%), Gaps = 17/249 (6%)

Query: 24  SGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID-GLVMSRSA 82
           +G V  +R      F  + ++    Q   N      +  K +   +   +D G  +S S 
Sbjct: 56  AGRVLLIRR----TFFVLSENGKRLQAYINIK---EDQGKELFKYFDEFVDIGDYLSISG 108

Query: 83  ETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF--LDLRRDTLHK 140
                   TG++ ++   ++I+S + + PLP          +  + R   L L  + L +
Sbjct: 109 NLFTTK--TGELTVNVSSLQIISKSLK-PLPEKRVGITNPELMMRNRVGAL-LVNNDLLE 164

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
           ++  R++II  +R  + +  ++E  TPIL   +    A+ F       +   + L  A +
Sbjct: 165 DLGWRSKIIFELRNYLNSLGYLEFETPILHKIAGGAVAKPFKTFHNSLKEELF-LRIATE 223

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + L+ SGF + F+I   FR+E   S   P EF  +++  ++++ +  ++  EN++  
Sbjct: 224 LHLKRLIVSGFTKVFEIGKSFRNEGIDSTHNP-EFTSIEIYTTYLDMELTMDLTENIILH 282

Query: 260 VFEEFSNGN 268
           + +  S   
Sbjct: 283 LNKLISERT 291



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 42/85 (49%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A +++L  +G E+A+G    +  E  L  F      +              + G+PP GG
Sbjct: 393 ARRFELYMDGVELANGFSEQNDPEEQLNQFKLQASRETSQGGVDYDYISCLEYGLPPTGG 452

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFP 563
           +  G+DR++M LL  ++++E+  FP
Sbjct: 453 VGIGLDRLIMFLLNRQSIKEIIAFP 477


>gi|325684154|gb|EGD26347.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 327

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 81/217 (37%), Gaps = 15/217 (6%)

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
            +E+       +R L LR       +  R RI  +       E F++   P+L  S+PEG
Sbjct: 7   NKEHGIDFLLDHRHLWLRSRRPFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEG 66

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
             +       +  ++  L Q+ Q Y   + A  F + F   P FR E  ++ R   EF+ 
Sbjct: 67  TTELFHIDYFDHDAY--LSQSGQLY-GEVGAEAFGKIFTFGPTFRAEASKTRRHLTEFWM 123

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           ++ EM+++ QD+ L+  E  L  V  +                +  +   G D   LR P
Sbjct: 124 MEPEMAWMHQDESLDLQERFLSYVVGQVLEH-----------CEYELSILGRDLDKLR-P 171

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
               N T        ++  +        + +  P + 
Sbjct: 172 AAEGNYTRLSYDDAVKMLQEAGKDFKWGDDFGAPDEA 208



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 55/175 (31%), Gaps = 22/175 (12%)

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
             +G+       D +K    A         + G  +       +  D PF+  N      
Sbjct: 172 AAEGNYTRLSYDDAVKMLQEAGK-DFKWGDDFGAPDEAFLSEQF--DRPFFIVN-----Y 223

Query: 453 DFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
             A  PF M +      +    D+ + + +         EI  G  R    + +      
Sbjct: 224 PVAIKPFYMKKNPENPLTYLCADVEAPEGYG--------EIMGGSEREADYDTLKAQIEE 275

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G++     + +       + G  PH G   G +R++  +    ++RE   FP  
Sbjct: 276 AGLNL----DDYSWYLDLRKYGSVPHSGFGMGFERVIAWICKLDHIREAVPFPRM 326


>gi|260947822|ref|XP_002618208.1| hypothetical protein CLUG_01667 [Clavispora lusitaniae ATCC 42720]
 gi|238848080|gb|EEQ37544.1| hypothetical protein CLUG_01667 [Clavispora lusitaniae ATCC 42720]
          Length = 499

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 97/266 (36%), Gaps = 27/266 (10%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGIT--QVVANPDSACFEIAKSVRSEWVLCI 73
           +  S +   G +  +R    I F+DI D        VV +     F   K  +    + I
Sbjct: 41  ETNSTITTHGHIKSIRTFKNIGFIDITDGTIFQTLNVVLSNPEDVFASGK-YKVGQSVSI 99

Query: 74  DGLVMSRSAETINANIITGQIELS------AQKIEILSVAEELPLPVFGEREYPESIRFK 127
            G  +              + EL          I+++ V  +        +    S    
Sbjct: 100 SGSWVQSKGNQ--------KYELQYDHHNPHHSIKLIGVVSDDYPIQKKVQ--SLSYLRS 149

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV- 186
              L  R  TL   +  R+R+            F + + P++T+S  EGA +        
Sbjct: 150 VPHLRHRTATLASILRFRSRVEQHAMNFFAKNGFTKVAPPLITSSDCEGAGEMFSIEPFT 209

Query: 187 ---NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              ++  F+   A      Q    ++A   +R + + PCFR E   ++R   EF+ L+ E
Sbjct: 210 KADSKEKFFGQDAFLTVSTQLHLEVLAPSLNRVWTLTPCFRAEQSNTNRHLSEFWMLEAE 269

Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFS 265
           + +VE    + + +E+ +R + ++  
Sbjct: 270 VCYVENISQLTDLVEDSIRSIAKDLK 295



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 21/136 (15%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL-VCNGFEI 491
              ++ D+P                PF MP     S  G D        +DL V    E+
Sbjct: 380 SPVFVTDYP------------REQKPFYMP----LSKYGLDKERPTVACFDLIVPEFGEL 423

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R H  + + Q     G++ E ++          Q G  PHGG   G +R++  L 
Sbjct: 424 VGGSLREHRHDELHQEIIRRGMNAESMQ----WYLSLRQNGTVPHGGFGMGFERLIAYLA 479

Query: 552 GAKNVREVSLFPMSQN 567
             +N++++S FP +  
Sbjct: 480 AIENIKDISAFPRAPQ 495


>gi|240274904|gb|EER38419.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 508

 Score =  129 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/274 (18%), Positives = 101/274 (36%), Gaps = 23/274 (8%)

Query: 32  PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT 91
               ++F+ + D YG+ Q +   D      A ++  E  + I G + +   +    +   
Sbjct: 170 SQKDMMFVTLSDGYGLLQCIFTGDLVKSYDAMTLTLETSIAIHGEMRAVPPKNHAYDDR- 228

Query: 92  GQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRII 149
              EL A    I+  A  ++  +      +      +  R L LR +T    +  R   +
Sbjct: 229 ---ELHADFFTIIGRAAGDKEAITTRVAPDSDPHTLYDNRHLVLRGETSSSVMKVRAATL 285

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
            + R     +  +E + P +  +  EG           + ++  L Q+ Q Y +  + S 
Sbjct: 286 RAFRKVFEEKGILEVTPPSMVQTQVEGGSTLFEFDYYGEKAY--LTQSSQLYLETCLPS- 342

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS---- 265
               F I P FR E   + R   E+  ++ E+ F+   D+L+ +E+++  V E       
Sbjct: 343 LGDVFCICPSFRAEKSLTRRHLSEYTHVEAELDFISFTDLLDHLEDMICRVIEVALSEPL 402

Query: 266 ----------NGNTVSNNFLRICYDDAIRRYGTD 289
                          S  F R+ Y +AI+     
Sbjct: 403 IARYVKQLNPEFTPPSRPFKRMKYSEAIQWLREH 436


>gi|149235766|ref|XP_001523761.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452740|gb|EDK46996.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 470

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/330 (17%), Positives = 110/330 (33%), Gaps = 33/330 (10%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L  S+ G  +   G+V  VR    I FLD+ D      +         +    +R    +
Sbjct: 32  LAKSEPGELIEARGFVKSVRKSKNIGFLDLADGTTSEDLKV---VFQTKEQPKLRVGQTV 88

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            ++G       +     +     E       I+   EE       ++            L
Sbjct: 89  AVNGEWAESKGKGQTRELRCNPQEPQ-HSYRIIGDVEEDYPLQ--KKSTSMQFLRTLPAL 145

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR-VNQGS 190
             R  T+      R+ +   M       +F + + PI+T+S  EGA +    +   N   
Sbjct: 146 KHRTSTIASFYRLRSFLETQMIDFFNINDFTKVTPPIITSSDCEGAGETFKIAESANFFE 205

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDI 249
                    Q     +A   +R + + PCFR E+  + R   EF+ L+ E+S V + + +
Sbjct: 206 KTTYLTVSTQLHIEALAMALNRVWTLTPCFRAENSNTTRHLCEFWMLEAEISHVEDLEQL 265

Query: 250 LNTMENVLRGVFEEFSNGNTV---------------------SNNFLRICYDDAIRRYGT 288
           LN  E++++    +  +                            + R+ Y DAI     
Sbjct: 266 LNFTEDMIKYSTRKLIDLKKEYLRGVYLEEELVQSRWAAITKQEKWPRMTYTDAIEYLNK 325

Query: 289 DKPDLRNPIIMHN----VTEHFVHSEFRVF 314
            + D    +   +      E ++  +  +F
Sbjct: 326 LRKDSEEKLEFGDSLLLEHEKYLAKDGPIF 355



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 55/156 (35%), Gaps = 25/156 (16%)

Query: 418 NHIAQELGIINCNCFE---FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
                 L + +          +I D+P                PF M +         D 
Sbjct: 334 LEFGDSLLLEHEKYLAKDGPIFITDYP------------AEMKPFYMLKSA-----KFDP 376

Query: 475 LSIKAFQYDL-VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGM 533
                  YDL   +  E+A G +R H  E ++++    G+  E ++          + G 
Sbjct: 377 EKPTVACYDLLFPDFGELAGGSLREHNYEELVESMGKHGMDVEEMD----WYTTLRKNGT 432

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            PHGG   G +R V  L G  NV++V  FP +   C
Sbjct: 433 IPHGGFGMGWERFVTYLSGHDNVKDVIPFPRAPGLC 468


>gi|71028924|ref|XP_764105.1| lysyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68351059|gb|EAN31822.1| lysyl-tRNA synthetase, putative [Theileria parva]
          Length = 708

 Score =  128 bits (322), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/282 (20%), Positives = 107/282 (37%), Gaps = 14/282 (4%)

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L   G V+         N+  G+I +  ++I+ LS    +P P           R++ R 
Sbjct: 304 LIDIGDVVELYGNVKKTNL--GEISIIPKRIKFLSKCL-IPPPSKQHGLKDIETRYRLRH 360

Query: 131 LDLRRDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           LDL  + L +  V KR +II  +R  +    F+E  TPIL   +     +          
Sbjct: 361 LDLLTNELSRYQVLKRFQIIAKIRRFLCERGFVEVDTPILNHYTSGDLAEPFETYYKRLN 420

Query: 190 SFYALPQAPQQY-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
               L  AP+   K++ M     + F+I  CFR+E   S R   EF  +++     + + 
Sbjct: 421 EKVKLRIAPEFSIKKIFMGLPLTKVFEIGKCFRNEGS-SLRHSPEFTMIEIYQKMADYNT 479

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           ++  +E+++  +     N + V +N   + +  A         DL       ++T +   
Sbjct: 480 MIKLLEDLINSLLSYGFNDDAVCDNVFEVKWRRA------KFSDLIKEYTGVDITSYNED 533

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC--DRMNEWA 348
                F +++S         I +  G  N      +   ++ 
Sbjct: 534 ELLDKFMEMISKTDSARSEQIESSMGRVNWGSIANEIFEKFV 575


>gi|302918386|ref|XP_003052646.1| hypothetical protein NECHADRAFT_91963 [Nectria haematococca mpVI
           77-13-4]
 gi|256733586|gb|EEU46933.1| hypothetical protein NECHADRAFT_91963 [Nectria haematococca mpVI
           77-13-4]
          Length = 581

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 61/305 (20%), Positives = 105/305 (34%), Gaps = 42/305 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSE 68
           LG   +G  ++L  W+   R  G  + F+++R+   + I  VVA          + V+  
Sbjct: 98  LGDEHLGKTIKLRAWIQNARMQGAKMAFVELREERDWAIQAVVAASPEGAPVSKQMVKWI 157

Query: 69  WVLCIDGLVMSRSAETIN----ANIITGQIELSAQKIEILS-----------VAEELPLP 113
             L ++G V+  +          ++     EL   K  ++S           VA      
Sbjct: 158 GGLNLEGYVLVEAKVEKPLEPVKSVKVSNYELHLTKCYVISPGPQVLGMGLAVANRPVTN 217

Query: 114 VFGERE---------------------YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSM 152
              E                          +       +  R          R  +    
Sbjct: 218 FDDEDAGGPVEEVKEGVDNLSLENAPGASMATHLNNPVMHKRAPVQQAIADVRMTVRKLF 277

Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
              + A +F++   P L  ++ EG  +       ++ +F A  Q+PQ YKQ  +A G  R
Sbjct: 278 SEYLEARDFVQFEPPCLIGAASEGGSNVFGLPYFDKQAFLA--QSPQFYKQYEIAGGRKR 335

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVS 271
            F I P FR E+  + R   EF  LD+EM   +   ++   +E VL  +F          
Sbjct: 336 VFCIGPVFRAENSNTPRHMTEFTGLDLEMEIEDHYHEVREMLEGVLLYIFRGIKERCAEQ 395

Query: 272 NNFLR 276
              +R
Sbjct: 396 IALVR 400



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 49/148 (33%), Gaps = 21/148 (14%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG +    +      DF   +   E  +      PF   +                  
Sbjct: 451 KALGALIKEKYN----TDFYVLDKFPEGAR------PFYALED--------PENPKVTNA 492

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           YD    G EI SGG R H+   +       GI               F+  G+PPHGG  
Sbjct: 493 YDFFMRGQEILSGGQRVHVPATLEARIRRKGIDPTS--QGIKEYVDIFRSAGVPPHGGGG 550

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G+DR+V   L   +V   S +P +   
Sbjct: 551 IGLDRVVAWYLNLPSVHLASYYPRTPKR 578


>gi|238883496|gb|EEQ47134.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 486

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 101/262 (38%), Gaps = 30/262 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHY---GITQVVANPDSACFEIAKSVRSEWVLCI 73
           +GS +   G+V  +R    + F+DI D      +  V+  PD   F++ +S      + +
Sbjct: 39  IGSIIEARGFVKSIRSSKKVGFVDITDGSISNNLNIVLQGPDQPKFKVGQS------IVV 92

Query: 74  DGLVMSRSAETINANIITGQIELS------AQKIEILSVAEELPLPVFGEREYPESIRFK 127
            G       +           EL          I IL    +       ++    S    
Sbjct: 93  KGDWTVGKGKQP--------FELKYNPENPQHAITILGDVTDDYPLQ--KKATSMSFLRN 142

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +  +  R  TL   +  R+ +   +     + +FI+ + P++T+S  EGA +      +N
Sbjct: 143 FPEIKHRTSTLGSFLRLRSHLEFKLMEFFQSRDFIKVTPPLITSSDCEGAGEVFKIEPLN 202

Query: 188 QGSFY----ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               +    A      Q     +A   +R + + PCFR E+  + R   EF+ L+ E+S 
Sbjct: 203 PKEPFFGKNAYLTVSTQLHLECLALALNRAWTLTPCFRAENSNTTRHLSEFWMLEAEISH 262

Query: 244 VEQDD-ILNTMENVLRGVFEEF 264
           V+  D +    E++++ V    
Sbjct: 263 VDNMDQVTTFTEDMIKFVTRSL 284



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 22/138 (15%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL-VCNGFEI 491
              +I D+P             +  PF M +    +    +        +DL V    E+
Sbjct: 368 SPIFITDYP------------ESQKPFYMLK--SANYNAENPTVT---CFDLLVPEFGEL 410

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
           A G +R H  +V+L       ++ E +E          + G  PHGG   G +R++  L 
Sbjct: 411 AGGSMREHDYQVLLANMKQENMNIEDME----WYLNLRKQGTIPHGGFGLGFERLISYLA 466

Query: 552 GAKNVREVSLFPMSQNFC 569
           G  NVR++S FP +   C
Sbjct: 467 GYDNVRDISAFPRAPELC 484


>gi|55730753|emb|CAH92097.1| hypothetical protein [Pongo abelii]
          Length = 120

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 56/114 (49%), Positives = 75/114 (65%), Gaps = 3/114 (2%)

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA-ENFIECSTPILTASSPEGARDFLV 182
           +R +YR+LDLR   +  N+  R++++  MR  +     F+   TP L   +P GA++FLV
Sbjct: 2   LRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLHGFVGIETPTLFKRTPGGAKEFLV 61

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           PSR   G FY+LPQ+PQQ+KQLLM  G DRYFQ+A C+RDE  R DR P EF Q
Sbjct: 62  PSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQP-EFTQ 113


>gi|328716490|ref|XP_001950701.2| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like isoform 1
           [Acyrthosiphon pisum]
          Length = 424

 Score =  128 bits (321), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/288 (18%), Positives = 109/288 (37%), Gaps = 21/288 (7%)

Query: 42  RDHYGITQVVANPDSACFEIAK---SVRSEWVLCIDGLVMSRSAETINANIITGQIELSA 98
           +  + I  +    D+   +  K   ++  E V+ I G V    ++  + +     +EL  
Sbjct: 5   QQQWSIQVLAVVSDTISKQFVKFCSNITKESVVDIKGKVARTPSKIGSCSQK--DVELYI 62

Query: 99  QKIEILSVA--------EELPLPVFGEREY-----PESIRFKYRFLDLRRDTLHKNIVKR 145
           +++ ++S +        E+   PV G+ +          +   R +DLR           
Sbjct: 63  EELWVVSQSADQLPLLLEDAYRPVNGDDKDADIRANLDTKLDNRAIDLRTPANQAIFRLE 122

Query: 146 TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
             +    R  + A+ F+E   P +  +      +    S     ++ A  Q P  +  + 
Sbjct: 123 AVVCKFFREILTAKGFVEIFPPRIKNAVTGNGTNVFKISYFKGSAYLA--QCPTFHNIIA 180

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF 264
           +A  F+R F I P FR ED  S R   EF  L++EM+F     ++++ + ++   +F+  
Sbjct: 181 IAGDFERVFTIGPVFRPEDSNSHRHLTEFTNLNLEMTFKHHYHEVVDVIASLFTSIFKGL 240

Query: 265 SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
                     +   Y     ++      L  P+ ++ + E+ V     
Sbjct: 241 RENYQSEIKTICEQYSVEPFKFLDPPLKLEFPMAVNMLRENGVEMGDE 288



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 5/113 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F +     E++   D   + +  YD+   G E+ +GG R H    +++   +  +     
Sbjct: 317 FPLAIRSFETMPDPD-SKVGSNSYDMFMRGEEVLTGGQRIHDYHYLMKRAKHCQVDI--- 372

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             +F     AF+ G PP  G   G++R+VML LG  N+R  S+FP        
Sbjct: 373 -EKFAYYLDAFRYGCPPLAGGGIGLERVVMLYLGLDNIRIASMFPRDSKRLTP 424


>gi|302921352|ref|XP_003053268.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256734208|gb|EEU47555.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 563

 Score =  128 bits (321), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 60/329 (18%), Positives = 111/329 (33%), Gaps = 22/329 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V + G V RV   GG+IF+ +R      Q + + D +    A ++  E  + I G + 
Sbjct: 139 KRVSVQGRVQRVAKQGGLIFVTLRRGLNQMQCLFSGDLSKTYDALTLMRETSMEIIGELW 198

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFLDLRRD 136
              A            EL A   +I++ A   +         +         R L LR +
Sbjct: 199 EVPAGAH----APLDRELRADFFKIIARAPGGDDAFTNQVPLDGDTQTLLNMRHLTLRHE 254

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R  I ++        +  + S P L  +  EG           + S+  L Q
Sbjct: 255 KPAAIMFVRDVIESAFHTAYKELDVKKVSPPALVQTQVEGGATLFKFDYYGETSY--LTQ 312

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           + Q Y + ++       + I   FR E   + R   E+  ++ E+ F+  DD+L  +E+V
Sbjct: 313 SSQLYLETVLP-VLGDVYCIEKSFRAEKSLTRRHLSEYTHVEAELDFITFDDLLAHLEHV 371

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           +  V +        +          AI++Y  +      P +    ++       R    
Sbjct: 372 ICRVIDLALENPIAAE---------AIKKYNPEFKKPERPFMRMRYSDAIDWLRERGIKN 422

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
               +  +             R   D +N
Sbjct: 423 EEGNDHTFGDDI----AEAAERKMTDEIN 447



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 46/131 (35%), Gaps = 16/131 (12%)

Query: 446 NEEEKKIDFAHNP-----FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           +E  + I   H P     F M +         D    ++    L+    EI  G +R   
Sbjct: 444 DEINRPIFLTHFPVEIKSFYMQKAED------DPRVTESVDC-LMPGVGEIVGGSMRIWD 496

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            E ++  +   GI      + +       + G  PHGG   G +R +  LL    VRE  
Sbjct: 497 WEELMAGYKREGIDP----SGYFWYTDQRKYGSTPHGGYGLGAERFLAWLLKLWTVREAC 552

Query: 561 LFPMSQNFCDL 571
           L+P     C  
Sbjct: 553 LYPRFMGRCTP 563


>gi|226292377|gb|EEH47797.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 559

 Score =  127 bits (320), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 102/262 (38%), Gaps = 20/262 (7%)

Query: 76  LVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
            V+  +          G++ ++  ++ ++++           E+E         R + L 
Sbjct: 150 KVVICAVIGNPHRTGRGELSVTVSELPKLITPCLHDIPLRVKEQETSPY----DRHVQLL 205

Query: 135 R-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
              T    +  R+ II  +R      +F+E  TPIL + +    AR F   +        
Sbjct: 206 SSPTASDILRTRSAIIQYIRNFFFNRSFMEVETPILASVAGGAVARPFQTCATEFPDRPL 265

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           AL  AP+ + + L+  GFD+ F+I P FR+E   +   P EF   +   ++ + + +++ 
Sbjct: 266 ALRIAPELWLKRLVVGGFDKVFEIGPSFRNEGLDNTHNP-EFTTCEFYHAYADLETLISI 324

Query: 253 MENVLRGVFEEFSNGNT------------VSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
            E++L G+ +     +              +  F R+ +  A+ +  + K     P   H
Sbjct: 325 TESLLTGLSQHIHTLHQTIQSSLSLPPAPFTTPFRRLDFIPALEQAMSHKLPNLTPTSTH 384

Query: 301 NVTEHFVHSEFRVFSKILSVNP 322
           N T           ++ L  NP
Sbjct: 385 NPTTQIHELFNNHLNQPLPSNP 406



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 12/100 (12%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVM------------LQAFSNVGISKEVVENRF 522
             + A + +L  +  E+ +     +                  +    VG  +   +   
Sbjct: 450 GQVVAARAELFIDSREVMNMYEEENSPFEQRRKFEGQVGVQGKEMGCGVGSGEGGGKVGD 509

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               RA Q G+PP GG   G+DR+ ML  GA+ + +V  F
Sbjct: 510 ESYLRALQWGLPPTGGWGCGVDRLCMLFTGARRIGDVLSF 549


>gi|170596103|ref|XP_001902642.1| Asparaginyl-tRNA synthetase [Brugia malayi]
 gi|158589572|gb|EDP28510.1| Asparaginyl-tRNA synthetase, putative [Brugia malayi]
          Length = 444

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 98/250 (39%), Gaps = 19/250 (7%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             +R+ GW  RV   G  +FL + D   +  + A       +I   V     + I G  +
Sbjct: 26  KDIRIQGWARRVETRGKFLFLHVSDGCSLKTIQAVVQR---DICPKVPVGSAVDIVGDWV 82

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
             + +          +EL A   E++ + ++    +  E    +  R KY  L ++    
Sbjct: 83  MSNGKQ-------QGMELFATNCEVVGLQQKSFSELPTEESCADVTRRKY-HLRMKSIPF 134

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP-----SRVNQGSFYA 193
              +  R+R+    R     E F    TP+LT +  EGA D  +      +     + Y 
Sbjct: 135 MCLLRLRSRLDQLSRSFFQKELFFHVDTPLLTHNDCEGAGDIFIVQADKQNYFGDQAVY- 193

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNT 252
           LP + Q + +        + + IAP  R +  ++ +   EF  L+ E +F +  + + + 
Sbjct: 194 LPVSSQLHLES-FVGSLSKVYTIAPALRADHSQTRQHLAEFRMLEAEYAFADDLEQLCDL 252

Query: 253 MENVLRGVFE 262
           +E  +  V +
Sbjct: 253 VERYVNYVID 262



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 26/125 (20%)

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNH 499
           P +       +  +   PF M + G             A  +DL+     E+A G +R  
Sbjct: 338 PLFVL-----RYPYTQKPFYMKRYGNY-----------AECFDLLAPFVGELAGGSLREP 381

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
            +E + +            ++         Q G PP  G   G++R +  L G  N+++ 
Sbjct: 382 DAEELRRRGC---------DDSLDWYLEIRQHGHPPSAGFGIGLERFMQALFGILNIKDT 432

Query: 560 SLFPM 564
             FP 
Sbjct: 433 VAFPR 437


>gi|302419457|ref|XP_003007559.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261353210|gb|EEY15638.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 569

 Score =  127 bits (319), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 62/387 (16%), Positives = 113/387 (29%), Gaps = 48/387 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA--------NPD 55
           R H   D+    +G  V++ GW+   R  G  + F+++R+                    
Sbjct: 92  RVH-LKDITEEHIGKSVKVRGWIQNSRMQGAKMCFIELREERNWAVQGVLAASPEGKPVS 150

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-------- 107
               +    +  E  + ++ ++        +  +     EL   K  IL+          
Sbjct: 151 RQMVKWMGGLALESFILVEAVIQKPLDPVKSCKVSN--FELHITKCYILAPGPEALGMSL 208

Query: 108 -------------EELPLPVFGEREYPES---IRFKYRFLDLRRDTLHKNIVKRTRIINS 151
                        +        E E              +  R          R    + 
Sbjct: 209 PVANRAVSSFEDEDPSVTAAKAEAEKSVEAHGTHLSNPAMHKRAPVQQAIADVRMARASV 268

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
               +  +NF++   P L  ++ EG  +        + ++ A  Q+PQ YKQ+ +A G  
Sbjct: 269 FAEYLDTQNFVQFEPPCLIGAASEGGANVFSMPYFEKTAYLA--QSPQFYKQIEIAGGRK 326

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTV 270
           R + I P        + R   EF  LD+EM    +  +++  +E VL  +F         
Sbjct: 327 RVYCIGPN-----SNTPRHMTEFTGLDLEMEIEEDYHEVMEMLEKVLLHIFRGIKERCAE 381

Query: 271 SNNFLRI---CYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVW 327
               +R      D  +   G     L        + E        V        P  +  
Sbjct: 382 QIEIIRAVYPSEDFLLPAPGEGVLRLTFAEGQKLLREEGPEEYRNVSDNEDMSTPQEKAL 441

Query: 328 AIPAKGGGGNRAF-CDRMNEWARSQGQ 353
               +       F  D+  E AR    
Sbjct: 442 GALIRKKYNTDFFVLDKFPESARPFYA 468



 Score = 42.4 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 52/148 (35%), Gaps = 21/148 (14%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG +    +      DF  +  +    K   +  PF   +                  
Sbjct: 439 KALGALIRKKYN----TDF--FVLD----KFPESARPFYALED--------PANPAVTNA 480

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIA 540
           YD    G EI SGG R H+  V+       G+  E            F+  G+PPHGG  
Sbjct: 481 YDFFMRGQEILSGGQRIHIPSVLEARLRTKGVDPES--QGIKEYVDVFRSVGVPPHGGGG 538

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G+DR+V   L   +V   S +P +   
Sbjct: 539 IGLDRVVAWFLNLPSVHLASYYPRTPKR 566


>gi|118356761|ref|XP_001011634.1| tRNA synthetases class II [Tetrahymena thermophila]
 gi|89293401|gb|EAR91389.1| tRNA synthetases class II [Tetrahymena thermophila SB210]
          Length = 551

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 77/393 (19%), Positives = 139/393 (35%), Gaps = 58/393 (14%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-----SACFEIAK 63
             D+  S +G  + + G +H +R  G   FL +R      QVVA            +  K
Sbjct: 89  IKDIDDSFLGKNILIRGRLHNLRIIGNCAFLIVRQQSQNIQVVAQKQADITSKTMIKWIK 148

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS--------VAEELPLPVF 115
            +  E ++ I G+V       I  N  + Q E+  +KI ++S        VA+   +   
Sbjct: 149 KIHLESIIDIHGIVQK---PNIPINCASSQYEICLKKIFVVSRSSSLNYGVADIQRIKKK 205

Query: 116 GEREYP---ESIRFKYR--------------FLDLRRDTLHKNIVKRTRIINSMRCRMIA 158
             +E     E I  + R               +DLR          ++ I    R  ++ 
Sbjct: 206 SLKEISDENEEIDLEDRKAINNSFLFNTINKVIDLRTSAQQAIFRLKSSICQMFRENLLL 265

Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
           + FIE  TP +  S  +   D         G    L   P+ Y Q+ + S F+R F+I P
Sbjct: 266 QGFIEIHTPKIIQSFKKEYSDSFSLDYF--GIDAQLSNFPKFYSQMAIQSDFERVFEIGP 323

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMENVLRGVFEEFSNGNTVS-----N 272
            +R    R+     EF  +++EM   E   ++++ + ++L  +F                
Sbjct: 324 IYRKLHGRTHHTLCEFIGMNLEMEIKESYQEVIDIVTDLLFSIFLSLEMMFQQELQIVKE 383

Query: 273 NFL-----------RICYDDAIRRYG-----TDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
            F            +I + +A    G      D  D  N + +  +      ++F + ++
Sbjct: 384 YFPSQTLKIKKPVLQISFQEACSLLGEVQNQMDYLDNINQVKLSKIISQKYDTDFYIITQ 443

Query: 317 ILSVNPGYEVWAI-PAKGGGGNRAFCDRMNEWA 348
             S++  +             +  F  R  E A
Sbjct: 444 FPSISSNFMDIVCDEEPNYTYSYKFFLRNGEIA 476



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 4/99 (4%)

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           D      + Y       EIASG  RNH    + +     GI    ++            G
Sbjct: 457 DEEPNYTYSYKFFLRNGEIASGSQRNHDPLSLEKRALQYGIDINSIKK----YIDVISYG 512

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             PHGG   G++R+++  L  +N+R+ SLF       + 
Sbjct: 513 AYPHGGCCIGLERLILYYLDLQNIRKASLFSRDSKTINP 551


>gi|298500780|ref|ZP_07010583.1| lysyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|297540561|gb|EFH76619.1| lysyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 277

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 89/199 (44%), Gaps = 15/199 (7%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G V   R      FL I++  G  Q  A+      E+ + ++ ++    
Sbjct: 68  LEALNHVVSIAGRVMAKRGP----FLVIQETSGRIQAYASK-----EVQQELKDKYQGLD 118

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++        +    G + ++ ++ ++L+ A   PLP        + +R++ R++DL
Sbjct: 119 IGDIIGVQGALHKSG--KGDLYVNMEQFQLLTKALR-PLPEKFHGLTDQEMRYRQRYVDL 175

Query: 134 RRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSF 191
             +   +N  + R+++++++R  MI++ F+E  TP++        AR F+          
Sbjct: 176 IVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPM 235

Query: 192 YALPQAPQQYKQLLMASGF 210
           Y L  AP+ Y + L+    
Sbjct: 236 Y-LRIAPELYLKRLVVGVL 253


>gi|315504462|ref|YP_004083349.1| tRNA synthetase class ii (d k and n) [Micromonospora sp. L5]
 gi|315411081|gb|ADU09198.1| tRNA synthetase class II (D K and N) [Micromonospora sp. L5]
          Length = 428

 Score =  127 bits (319), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 59/253 (23%), Positives = 101/253 (39%), Gaps = 18/253 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG+ VRL+GWVHR R    + FL +RD  G+ QVV    +   ++         L  + +
Sbjct: 13  VGATVRLAGWVHRRRLLKSVAFLIVRDAAGLAQVVVAAPAVREQVE-------ALTEETV 65

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----REYPESIRFKYRFLD 132
           V        N     G   +   +  +  +      P F             +  +  + 
Sbjct: 66  VEVVGTVVANPTAPAG---VEVVEPTVRPLGPPAVPPPFDLYRPVLTATLPTQLDHAPVA 122

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       +      ++  R  +    F+E  TP + ASS E   +        + ++ 
Sbjct: 123 LRHPVRSAALRISAAAVSGFRATLDGRGFVEVHTPKVVASSTESGANVFALDWFGRPAYL 182

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILN 251
           A  Q+PQ YKQ LM   F+R +++ P FR E   + R   ++  LD+E+ F  +  D++ 
Sbjct: 183 A--QSPQFYKQ-LMVGVFERVYEVGPVFRAEPHDTVRHLAQYTSLDVELGFVADHRDVMA 239

Query: 252 TMENVLRGVFEEF 264
            +   L G+    
Sbjct: 240 VLRETLAGMVATV 252



 Score = 98.2 bits (243), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 24/139 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +  +  +F ++  +P             A  PF                   +  +DL+ 
Sbjct: 308 LREHGCDFLFVTGYPM------------AKRPFYTHPD--------PARPAYSNGFDLLF 347

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
            G E+ +GG R H     L A +     +      + G   AF+ GMPPHGG A G++R 
Sbjct: 348 RGVELVTGGQRLHRHADYLAALAA----RGEPVEPYAGYVDAFRHGMPPHGGFAIGLERF 403

Query: 547 VMLLLGAKNVREVSLFPMS 565
           V  L GA NVREV+ FP  
Sbjct: 404 VARLTGAANVREVTAFPRD 422


>gi|302869065|ref|YP_003837702.1| tRNA synthetase class II (D K and N) [Micromonospora aurantiaca
           ATCC 27029]
 gi|302571924|gb|ADL48126.1| tRNA synthetase class II (D K and N) [Micromonospora aurantiaca
           ATCC 27029]
          Length = 428

 Score =  127 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 59/253 (23%), Positives = 101/253 (39%), Gaps = 18/253 (7%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG+ VRL+GWVHR R    + FL +RD  G+ QVV    +   ++         L  + +
Sbjct: 13  VGATVRLAGWVHRRRLLKSVAFLIVRDAAGLAQVVVAAPAVREQVE-------ALTEETV 65

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----REYPESIRFKYRFLD 132
           V        N     G   +   +  +  +      P F             +  +  + 
Sbjct: 66  VEVVGTVVANPTAPAG---VEVVEPTVRPLGPPAVPPPFDLYRPVLTATLPTQLDHAPVA 122

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           LR       +      ++  R  +    F+E  TP + ASS E   +        + ++ 
Sbjct: 123 LRHPVRSAALRISAAAVSGFRATLDGRGFVEVHTPKVVASSTESGANVFALDWFGRPAYL 182

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILN 251
           A  Q+PQ YKQ LM   F+R +++ P FR E   + R   ++  LD+E+ F  +  D++ 
Sbjct: 183 A--QSPQFYKQ-LMVGVFERVYEVGPVFRAEPHDTVRHLAQYTSLDVELGFVADHRDVMA 239

Query: 252 TMENVLRGVFEEF 264
            +   L G+    
Sbjct: 240 VLRETLAGMVATV 252



 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 24/139 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +  +  +F ++  +P             A  PF                   +  +DL+ 
Sbjct: 308 LREHGSDFLFVTGYPM------------AKRPFYTHPD--------PARPAYSNGFDLLF 347

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
            G E+ +GG R H     L A +     +      + G   AF+ GMPPHGG A G++R 
Sbjct: 348 RGVELVTGGQRLHRHADYLAALAA----RGEPVEPYAGYVDAFRHGMPPHGGFAIGLERF 403

Query: 547 VMLLLGAKNVREVSLFPMS 565
           V  L GA NVREV+ FP  
Sbjct: 404 VARLAGAANVREVTAFPRD 422


>gi|241594922|ref|XP_002404413.1| aspartyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215500406|gb|EEC09900.1| aspartyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 487

 Score =  127 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 58/266 (21%), Positives = 99/266 (37%), Gaps = 41/266 (15%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY----GITQVVANPDSACFEIAKSVR 66
           DL  S  GS++ + G +H  R  G   F  +R        +  V      A  +    V 
Sbjct: 81  DLSSSIAGSYIWIRGRLHTSRSKGKQCFFVLRQQQYTVQCLVAVSEKVSKAMVKFCALVT 140

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
            E +L + G+V S   +          IEL  +++ ++S AE        +   PE    
Sbjct: 141 KESLLDVYGIVQSSPQKVEGCT--QQDIELHIEQLFVVSAAEPRLPLQVEDAARPE---- 194

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
                    +   +          S      +            A++ EG  +    S  
Sbjct: 195 ---------NEDRRAC--------SNLAFFPSC-----------AAASEGGANVFEVSYF 226

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VE 245
              ++ A  Q+PQ YKQ+ +AS FD+ F +   FR ED  + R   EF  LD+EM+F   
Sbjct: 227 KGSAYLA--QSPQLYKQMAIASDFDKVFTVGAVFRAEDSNTHRHLCEFVGLDLEMAFNYH 284

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS 271
             ++L+ +  +   +F+   +     
Sbjct: 285 YHEVLDIIGQMFVDIFKGLRDRYADE 310



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 14/122 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           K      PF             D  + K +  YD+   G EI SG  R H    + +   
Sbjct: 379 KYPLKVRPFYTM---------PDPHNAKVSNSYDMFMRGEEILSGAQRIHDPTFLTERAK 429

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G+    ++        +F+ G+ PH G   G++R+ ML LG  N+R+ S+FP      
Sbjct: 430 EHGVDVSKIKA----YIDSFRYGVAPHAGGGIGLERVTMLYLGLDNIRKTSMFPRDPKRL 485

Query: 570 DL 571
             
Sbjct: 486 TP 487


>gi|154295362|ref|XP_001548117.1| hypothetical protein BC1G_13262 [Botryotinia fuckeliana B05.10]
 gi|150844129|gb|EDN19322.1| hypothetical protein BC1G_13262 [Botryotinia fuckeliana B05.10]
          Length = 423

 Score =  127 bits (318), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 25/236 (10%)

Query: 101 IEILSVAEELPLPVFGEREYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAE 159
           IEI  V      PV  + E PES R + R LDL   + +   +  R++I   +R  ++ +
Sbjct: 35  IEIPKVLTPSLAPVPQKLEDPES-RIRNRHLDLLVNNDVAATLRLRSKITQHIRDFLVQD 93

Query: 160 NFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
           +F+E  TPIL   +S   A+ F   +        AL  AP+ + + L+  G DR F+I P
Sbjct: 94  DFLEFQTPILADQASGAMAQPFKTNATEFPEKQLALRIAPELWLKRLVIGGLDRVFEIGP 153

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------ 266
            FR+E   +   P EF   +   ++ + +D+++  E ++ G+    +             
Sbjct: 154 AFRNEGLDAIHNP-EFTTCEFYKAYADLEDLISMTEKLISGLVRLVNGLRDDPQQVKYMP 212

Query: 267 --------GNTVSNNFLRICYDDAIR-RYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
                    +  +  F RI +  A+    G   PDL+      ++ E F      V
Sbjct: 213 FAELPRFEEDLYTKPFKRIEFIPAVEAALGEKLPDLQKDDARKDLLEIFTRHSLEV 268



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 4/112 (3%)

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML---QAFSN 510
             H+P +M     +S        + + + +L     EIA+     +         +    
Sbjct: 296 IMHHPSSMA-PLSKSFLDPKTNQLVSARVELFIQHQEIANMYEEENSPFEQSYKFREQLR 354

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               +  +     G  +A + G+PP GG   G+DR+VM L G+K + +V  F
Sbjct: 355 YKDIENPINKVDEGYIQALEVGLPPTGGWGCGVDRLVMWLSGSKRISDVLPF 406


>gi|71021047|ref|XP_760754.1| hypothetical protein UM04607.1 [Ustilago maydis 521]
 gi|46100184|gb|EAK85417.1| hypothetical protein UM04607.1 [Ustilago maydis 521]
          Length = 1047

 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 55/285 (19%), Positives = 105/285 (36%), Gaps = 39/285 (13%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY--------GITQVVANPDS 56
           RT   G      VG  V + GW+   R    I FL++ D           + +   +  +
Sbjct: 576 RTFESG--STDPVG--VDVKGWLRSTRKQKSITFLELSDGSLSGSRSLQAVVRSSKDSPT 631

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           +  +    +     L + G +       I       +IEL A  +++LS  +        
Sbjct: 632 SDMDRLAGLTVGTALRLTGHLRPGRGTKIG-----QEIELDASSVQVLSNCDLTYPLAAV 686

Query: 117 EREYPESIR-----------FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS 165
           + ++  +              +   L  R          R+R+ ++M   + + +F++ +
Sbjct: 687 QMQHNSTAIEQGGYSATLAERRNPHLLGRLPRYAAVARTRSRLEHAMGEFLASHDFVKVA 746

Query: 166 TPILTASSPEGARDFLVP-------SRVNQGSFY----ALPQAPQQYKQLLMASGFDRYF 214
            P+LT+S  EGA +           S+ +  +F+    A      Q        G  R +
Sbjct: 747 CPVLTSSDCEGAGEVFQVVADSDARSKHDPAAFWSGSHAYLSVSSQLHLEAAGLGLGRVW 806

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              P FR E   ++R   EF+ L+ EM F +   IL+  E +++ 
Sbjct: 807 TCNPAFRAEGSATNRHLAEFWMLEAEMYFTDLAGILHVTEQMIKA 851



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 47/150 (31%), Gaps = 24/150 (16%)

Query: 420  IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
            +A E        F   ++  +P  +     K+                            
Sbjct: 914  LASEHERYLAAHFGPVFVTHYPLSQKAFYMKRYSSC--------------------PTLV 953

Query: 480  FQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC--GMPPH 536
              +DL+     E+  G +R H    + +  + +      + ++        +   G   H
Sbjct: 954  ECFDLLIPSLGELVGGSVREHRRSSLTENLAELACG-VAMSDKLAWYLDDLKKFGGALDH 1012

Query: 537  GGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             G   GI+R++  +    +V++V  FP  +
Sbjct: 1013 AGFGMGIERLLAWVTNTTSVKDVVPFPRVK 1042


>gi|156054929|ref|XP_001593389.1| hypothetical protein SS1G_06311 [Sclerotinia sclerotiorum 1980]
 gi|154704091|gb|EDO03830.1| hypothetical protein SS1G_06311 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 459

 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 3/164 (1%)

Query: 118 REYPESIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPE 175
           +      R + R LDL   + +   +  R++I   +R  ++ +NF+E  TPIL   +S  
Sbjct: 81  KLEDPETRIRNRHLDLLVNNDVAATLRLRSKITQHIRDFLVQDNFLEFQTPILADKASGA 140

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            A+ F   +        AL  AP+ + + L+  G DR F+I P FR+E   +   P EF 
Sbjct: 141 MAQPFKTNATEFPEKELALRIAPELWLKRLVIGGLDRVFEIGPAFRNEGLDATHNP-EFT 199

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
             +   ++ + +D+++  EN++ G+    +       +   + +
Sbjct: 200 TCEFYKAYADIEDLISMTENLISGLVYLVNGLRVDPQHVKYMPF 243



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 4/112 (3%)

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
             H P  M     +S        + + + +L     EIA+     +        F     
Sbjct: 326 IMHQPSCMA-PLSKSFLDPTTKQLVSARVELFIQHQEIANMYEEENSPFEQRYKFGEQLK 384

Query: 514 SK---EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            K     ++    G  +A + G+PP GG   G+DR+VM L GAK + +V  F
Sbjct: 385 FKDIENPMDKVDEGYIQALEVGLPPTGGWGCGVDRLVMWLSGAKRISDVLPF 436


>gi|171683941|ref|XP_001906912.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941931|emb|CAP67583.1| unnamed protein product [Podospora anserina S mat+]
          Length = 573

 Score =  126 bits (317), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 60/307 (19%), Positives = 102/307 (33%), Gaps = 46/307 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQ---VVANPDS----ACFEIAK 63
           L    +G  V+L  ++   R  G  + F+++R+         V AN D        +   
Sbjct: 90  LNDEHLGKKVKLRAFLQNARMQGAKMAFVELRETGNWAIQGVVAANADGSVSRQMVKFIG 149

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL--------------SVAEE 109
           SV  E  + ++  V        +  +     EL   K+ ++              + A  
Sbjct: 150 SVNPESFVVVEATVEKPLEPVKSCRVSN--YELHLTKLFVISSAPAMLGMTLSTANKAVT 207

Query: 110 LPLPVFGEREYPES--------------------IRFKYRFLDLRRDTLHKNIVKRTRII 149
                    E P                             +  R          R  + 
Sbjct: 208 NFSDEEAPAEAPVEGVEKLSISGEVSGPPAASMLTHLDNIVMHKRSYVQQAIADIRVEVK 267

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
           +  R  +    F E   P L A++ EG  +        + +F A  Q+PQ YKQ+ + +G
Sbjct: 268 HLFRSYLREHGFKEFEPPCLIAAASEGGANVFRLPYFEKEAFLA--QSPQFYKQIEVLAG 325

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
             R F + P FR E+  + R   EF  LD+EM   +  + L+ +E VL  +F        
Sbjct: 326 RKRVFCVGPVFRAENSNTPRHMTEFTGLDLEMEVTDYQEALHMLEGVLLHIFRTIKKTCA 385

Query: 270 VSNNFLR 276
                +R
Sbjct: 386 DEIALVR 392



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 49/148 (33%), Gaps = 21/148 (14%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG +    +      DF   +      K      PF   +         +     A  
Sbjct: 443 KALGALIKKKYN----TDFYVLD------KFPSDARPFYAKED------PTNPKVTLA-- 484

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC-GMPPHGGIA 540
           YD+   G EI SGG R H    +       G+  +            F+  G PPH G  
Sbjct: 485 YDMFMRGQEILSGGQRIHDPVELEARLRTKGVDPKS--PGIREYVDLFRQVGAPPHAGGG 542

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G+DR+V   L   +V   + +P +   
Sbjct: 543 IGLDRVVAWYLNLPSVHLAAYYPRTPKR 570


>gi|213852485|ref|ZP_03382017.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 80

 Score =  126 bits (317), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 30/77 (38%), Positives = 44/77 (57%)

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
           I++E    +FG L  A + G PPH G+A G+DR+ MLL G  N+R+V  FP +     L+
Sbjct: 4   INEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLM 63

Query: 573 MGSPSTVSVEQLRELGL 589
             +PS  +   L EL +
Sbjct: 64  TEAPSFANPTALAELSI 80


>gi|58266942|ref|XP_570627.1| asparagine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57226860|gb|AAW43320.1| asparagine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 532

 Score =  126 bits (317), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/271 (18%), Positives = 92/271 (33%), Gaps = 22/271 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
               V ++GW+  VR H  + F+++ D      + A           S+         G 
Sbjct: 60  ANEPVEVNGWIKSVRAHKNVAFVEVSDGSTGENIQAVLKGKSKAEGLSI---------GA 110

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                     +      +EL  +  ++L   +    P+  ++  P S+      L  R  
Sbjct: 111 SAKLKGRLEQSRGRGQDVELVVEDAQVLGTCDAEAYPIQ-KKSLPASVLRDNAHLRFRTS 169

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R  +         + +F+   TPILT S  EGA +          S  + PQ
Sbjct: 170 QTAAVMRIRDALARDWHDWFESHDFVHVHTPILTGSDCEGAGEVFTIVDHPPPSSSSSPQ 229

Query: 197 APQQYKQLLMAS----------GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
               +   L  S             R + ++P FR E   + R   EF+ L+ E+++  +
Sbjct: 230 PFFPHPVHLTVSAQLHLEAPTHALSRTYTLSPSFRAEPSLTSRHLSEFHMLEAEVAW--E 287

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           +D+   +  V  GV     N         R+
Sbjct: 288 NDLDGLLSVVEEGVKSTVGNILNGEKRGKRL 318



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 7/115 (6%)

Query: 451 KIDFAHNPFTM--PQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           +      PF M      +E+ K +         +DL+   + E+A G +R H    +  A
Sbjct: 413 RYPKELKPFYMLPTPSTIENEKTHASQGSTVECFDLLFPHWGEMAGGSLREHRLTELTHA 472

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              +G+ K      +       + G  PHGG   G DR V  + G  NVR+V  +
Sbjct: 473 IEEMGMKK----EEYNWYLDLRKYGSAPHGGWGMGWDRWVGWVTGLGNVRDVVPY 523


>gi|134110734|ref|XP_775831.1| hypothetical protein CNBD2410 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258497|gb|EAL21184.1| hypothetical protein CNBD2410 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 513

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/271 (18%), Positives = 92/271 (33%), Gaps = 22/271 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
               V ++GW+  VR H  + F+++ D      + A           S+         G 
Sbjct: 41  ANEPVEVNGWIKSVRAHKNVAFVEVSDGSTGENIQAVLKGKSKAEGLSI---------GA 91

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                     +      +EL  +  ++L   +    P+  ++  P S+      L  R  
Sbjct: 92  SAKLKGRLEQSRGRGQDVELVVEDAQVLGTCDAEAYPIQ-KKSLPASVLRDNAHLRFRTS 150

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +  R  +         + +F+   TPILT S  EGA +          S  + PQ
Sbjct: 151 QTAAVMRIRDALARDWHDWFESHDFVHVHTPILTGSDCEGAGEVFTIVDHPPPSSSSSPQ 210

Query: 197 APQQYKQLLMAS----------GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
               +   L  S             R + ++P FR E   + R   EF+ L+ E+++  +
Sbjct: 211 PFFPHPVHLTVSAQLHLEAPTHALSRTYTLSPSFRAEPSLTSRHLSEFHMLEAEVAW--E 268

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRI 277
           +D+   +  V  GV     N         R+
Sbjct: 269 NDLDGLLSVVEEGVKSTVGNILNGEKRGKRL 299



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 7/115 (6%)

Query: 451 KIDFAHNPFTM--PQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           +      PF M      +E+ K +         +DL+   + E+A G +R H    +  A
Sbjct: 394 RYPKELKPFYMLPTPSTIENEKTHASQGSTVECFDLLFPHWGEMAGGSLREHRLTELTHA 453

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              +G+ K      +       + G  PHGG   G DR V  + G  NVR+V  +
Sbjct: 454 IEEMGMKK----EEYNWYLDLRKYGSVPHGGWGMGWDRWVGWVTGLGNVRDVVPY 504


>gi|67516293|ref|XP_658032.1| hypothetical protein AN0428.2 [Aspergillus nidulans FGSC A4]
 gi|40747371|gb|EAA66527.1| hypothetical protein AN0428.2 [Aspergillus nidulans FGSC A4]
 gi|259489326|tpe|CBF89504.1| TPA: lysyl-tRNA synthetase, hypothetical protein (Eurofung)
           [Aspergillus nidulans FGSC A4]
          Length = 527

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 24/242 (9%)

Query: 84  TINANIITGQIELSAQKI-EILSVA-EELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                   G++ + A  + ++LS    ++PL   G    P       R + +  D     
Sbjct: 141 GKPHRTERGELSIVATDLPQLLSPCLHDIPLDAHGHENSPYP-----RHVQMLGDPATVK 195

Query: 142 IVK-RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQ 199
           ++K R+ I   +R  ++ ++F+E STPIL        AR F   +        AL  AP+
Sbjct: 196 VIKSRSLITQHIRQFLLDKSFMEVSTPILNGIPGGASARPFYTSATEFPDRQLALRIAPE 255

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + L+  GFDR F+I P FR+E       P EF   +   ++   ++++NT E +L G
Sbjct: 256 LWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP-EFTTCEFYQAYSNLEELMNTTEELLCG 314

Query: 260 VFE----EFSNGNTVSN-------NFLRICYDDAIRRYGTDK--PDLRNPIIMHNVTEHF 306
           + +    EF+               F RI +   I   G D+  PDL  P  +  VT+ F
Sbjct: 315 LAQVFIAEFNKRKEPPPTAIDFTIPFHRIDFITGIE-LGIDRQLPDLTAPDSLEQVTQIF 373

Query: 307 VH 308
             
Sbjct: 374 TD 375



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 3/94 (3%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGLYRA 528
            D     A + +L   G EIA+     +      + F +     +             RA
Sbjct: 425 PDNNQRVAARAELFIEGKEIANMYEEENSPWEQRRKFEDQLKYSKDANEPGEIDEEYLRA 484

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            + G+PP GG   GIDR+VML    K + EV  F
Sbjct: 485 LEWGLPPTGGWGCGIDRLVMLFTKVKKIAEVLPF 518


>gi|68487983|ref|XP_712150.1| hypothetical protein CaO19.6698 [Candida albicans SC5314]
 gi|68488034|ref|XP_712125.1| hypothetical protein CaO19.13990 [Candida albicans SC5314]
 gi|77023052|ref|XP_888970.1| hypothetical protein CaO19_6698 [Candida albicans SC5314]
 gi|46433493|gb|EAK92931.1| hypothetical protein CaO19.13990 [Candida albicans SC5314]
 gi|46433520|gb|EAK92957.1| hypothetical protein CaO19.6698 [Candida albicans SC5314]
 gi|76573783|dbj|BAE44867.1| hypothetical protein [Candida albicans]
          Length = 489

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 103/265 (38%), Gaps = 33/265 (12%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHY---GITQVVANPDSACFEIAKSVRSEWVLCI 73
           +GS +   G+V  +R    + F+DI D      +  V+  PD   F++ +S      + +
Sbjct: 39  IGSIIEARGFVKSIRSSKKVGFVDITDGSISNNLNIVLQGPDQPKFKVGQS------IVV 92

Query: 74  DGLVMSRSAETINANIITGQIELS------AQKIEILSVAEELPLPVFGEREYPESIRFK 127
            G       +           EL          I IL   +        ++    S    
Sbjct: 93  KGDWTVGKGKQP--------FELKYNPENPQHAITILG--DVTDDYPLQKKATSMSFLRN 142

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +  +  R  TL   +  R+ +   +     + +FI+ + P++T+S  EGA +      +N
Sbjct: 143 FPEIKHRTSTLGSFLRLRSHLEFKLMEFFQSRDFIKVTPPLITSSDCEGAGEVFKIEPLN 202

Query: 188 QGS----FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
             +    F+   A      Q     +A   +R + + PCFR E+  + R   EF+ L+ E
Sbjct: 203 DNNPKEPFFGKNAYLTVSTQLHLECLALALNRAWTLTPCFRAENSNTTRHLSEFWMLEAE 262

Query: 241 MSFVEQDD-ILNTMENVLRGVFEEF 264
           +S V   D +    E++++ V +  
Sbjct: 263 ISHVNNVDQVTTFTEDMIKFVTKSL 287



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 22/138 (15%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL-VCNGFEI 491
              +I D+P             +  PF M +    +    +        +DL V    E+
Sbjct: 371 SPIFITDYP------------ESQKPFYMLK--SANYNAENPTVA---CFDLLVPEFGEL 413

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
           A G +R H  +V+L       ++ E +E          + G  PHGG   G +R++  L 
Sbjct: 414 AGGSMREHDYQVLLANMKQENMNIEDME----WYLNLRKQGTIPHGGFGLGFERLISYLA 469

Query: 552 GAKNVREVSLFPMSQNFC 569
           G  NVR++S FP +   C
Sbjct: 470 GYDNVRDISAFPRAPELC 487


>gi|330469417|ref|YP_004407160.1| aspartyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328812388|gb|AEB46560.1| aspartyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 428

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 14/255 (5%)

Query: 16  DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
             G  VR++GWVHR R    + FL +RD  G+ QVV    +   EI         L  + 
Sbjct: 12  HTGGTVRIAGWVHRRRLLKSVAFLIVRDAAGLAQVVVTDPAVRAEIE-------ALPEET 64

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEEL--PLPVFGEREYPESIRFKYRFLDL 133
           +V   +    N     G +EL+   +  L                      +  +  + L
Sbjct: 65  VVEVVATVAANPAAPAG-VELTDPTVRPLGPPAVPPPFDLYRPTLTASLPTQLDHAPVAL 123

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R  +    +      +   R  + A  F+E  TP + ASS E   +        + ++ A
Sbjct: 124 RHPSRSAAVRVSAAAVAGFRATLDAHRFVEIHTPKVVASSTESGANVFALDWFGRPAYLA 183

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNT 252
             Q+PQ YKQ LM    +R +++ P FR E   + R   ++  LD E+ F+ +  D++  
Sbjct: 184 --QSPQFYKQ-LMVGVVERVYEVGPVFRAEPHDTVRHLAQYTSLDAELGFITDHRDVMAV 240

Query: 253 MENVLRGVFEEFSNG 267
           + + L G+ +   + 
Sbjct: 241 LRDTLAGMLDTVVDM 255



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 24/139 (17%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
              +  +F ++  +P             A  PF                   +  +DL+ 
Sbjct: 308 RREHGSDFVFVTGYPM------------AKRPFYTHPD--------PARPDYSNGFDLLF 347

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
            G E+ +GG R H     L A +     +      + G   AF+ GMPPHGG A G++R 
Sbjct: 348 RGLELVTGGQRLHRHADYLTALAA----RGEPVEPYAGYVDAFRHGMPPHGGFAIGLERF 403

Query: 547 VMLLLGAKNVREVSLFPMS 565
           V  L G  N+REV+ FP  
Sbjct: 404 VSRLTGTPNIREVTPFPRD 422


>gi|124808534|ref|XP_001348339.1| lysine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23497231|gb|AAN36778.1| lysine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 674

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 6/208 (2%)

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           +E   +      +   G  ++          + G+I L  + I +LS +  LPLP   + 
Sbjct: 214 YETYNNQIMARKIIELGDFVAVKG--FVRKTLRGEITLHVKDIYMLSKSL-LPLPDKYKG 270

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
                 +++ R+LD   +   K+ +K R  II  +R  ++  NF+E  TPIL        
Sbjct: 271 MKDVEYKYRKRYLDFLTNNDQKDKIKARYDIIQEIRKYLLKRNFLEVDTPILQLIPGGAT 330

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                    +      L  +P+ + + L+ SG  ++ F+++ CFR+E   S   P EF  
Sbjct: 331 AKPFETYLKSLNLILYLRISPELFLKKLIVSGISEQIFELSKCFRNEGLSSIHNP-EFTM 389

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEF 264
           L++  S+     ++N +E +++ +F++F
Sbjct: 390 LEIYKSYTNYKYMMNFVEKIIKHLFKKF 417



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               A   G+PP GG+  GIDR+ ML      ++ +  FP
Sbjct: 627 DYVTALAHGLPPTGGLGIGIDRLCMLFTNTNTIKNIVSFP 666


>gi|270668238|ref|ZP_06222511.1| aspartate--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270316714|gb|EFA28493.1| aspartate--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 108

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 60/109 (55%), Positives = 81/109 (74%), Gaps = 1/109 (0%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +  R +I + +R  M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +
Sbjct: 1   MKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLF 60

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+   ++ 
Sbjct: 61  KQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFLTAPEVR 108


>gi|268325212|emb|CBH38800.1| aspartyl-tRNA synthetase, mid part [uncultured archaeon]
          Length = 147

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 3/144 (2%)

Query: 102 EILSVAEEL-PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAEN 160
           ++LS A ++ PL   G+       RF  RF+DLR +      + R+  + ++R       
Sbjct: 2   DVLSEASQVLPLDTTGKEGAELDTRFDARFMDLRTERTKHIFMIRSLTLKAIRDFFDERG 61

Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
            IE +TP + +++ EG       S   + +F  L Q+PQ YKQ+LMASGFDR ++IAP F
Sbjct: 62  LIEINTPKIVSAATEGGTALFPISYFEREAF--LNQSPQLYKQILMASGFDRVYEIAPIF 119

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFV 244
           R E+  + +   E   +D+E++FV
Sbjct: 120 RAEEHDTTKHLNEATSVDVELAFV 143


>gi|213421219|ref|ZP_03354285.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 213

 Score =  125 bits (315), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 68/188 (36%), Gaps = 5/188 (2%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V   V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDQEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEEV----LHLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A K+E+    E+        + +      +   L  R 
Sbjct: 72  CSVVVTGKVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           + +      R  +  ++      + F   STP++TAS  EGA +    S ++  +     
Sbjct: 132 NLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRND 191

Query: 196 QAPQQYKQ 203
           Q    + +
Sbjct: 192 QGRVDFDK 199


>gi|241957635|ref|XP_002421537.1| asparagine--tRNA ligase, putative; asparaginyl-tRNA synthetase,
           mitochondrial precursor, putative [Candida dubliniensis
           CD36]
 gi|223644881|emb|CAX40879.1| asparagine--tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 489

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 99/262 (37%), Gaps = 27/262 (10%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           +GS +   G+V  +R    + F+DI D         N      +  K  +    + + G 
Sbjct: 39  IGSIIEARGFVKSIRSSKKVGFVDITDGS--ISNNLNIVLQGSDQPK-FKVGQSIVVKGD 95

Query: 77  VMSRSAETINANIITGQIELS------AQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
             +   +           EL            IL    +       ++    S    +  
Sbjct: 96  WCAGKGKQP--------FELKYNPENPQHTFTILGDVTDDYPLQ--KKATSMSFLRNFPE 145

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           +  R  TL   +  R+ +   +     +++FI+ + P++T+S  EGA +      +N   
Sbjct: 146 IKHRTSTLGSFLRLRSHLEFKLMEFFQSQDFIKVTPPLITSSDCEGAGEVFKIEPLNDND 205

Query: 191 ----FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               F+   A      Q     +A   +R + + PCFR E+ ++ R   EF+ L+ E+S 
Sbjct: 206 PKEPFFGKNAYLTVSTQLHLECLALALNRAWTLTPCFRAENSKTTRHLSEFWMLEAEISH 265

Query: 244 -VEQDDILNTMENVLRGVFEEF 264
            V+ D +    EN++R V +  
Sbjct: 266 VVDVDQVTTFTENMIRFVTKSL 287



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 22/138 (15%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL-VCNGFEI 491
              +I D+P      E +K      PF M +    +L+   +       +DL V    E+
Sbjct: 371 SPIFITDYP------ETQK------PFYMLKSANYNLEKPTVA-----CFDLLVPEFGEL 413

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
           A G +R H  EV+L       ++ E +E          + G  PHGG   G +R++  L 
Sbjct: 414 AGGSMREHDYEVLLANMKQDNMNIEDIE----WYLNLRKQGTIPHGGFGLGFERLITYLA 469

Query: 552 GAKNVREVSLFPMSQNFC 569
           G  NVR++S FP +   C
Sbjct: 470 GYDNVRDISAFPRAPELC 487


>gi|270624655|ref|ZP_06221913.1| aspartate--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270317679|gb|EFA29093.1| aspartate--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 74

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 29/74 (39%), Positives = 44/74 (59%)

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
           FG L  A + G PPH G+A G+DR+ MLL G +N+R+V  FP +     L+  +PS  + 
Sbjct: 1   FGFLLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANP 60

Query: 582 EQLRELGLRIVENP 595
           + L EL + +V+  
Sbjct: 61  QALEELAISVVKAE 74


>gi|666876|gb|AAB41345.1| aspS [Chlamydophila caviae]
          Length = 99

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/88 (40%), Positives = 57/88 (64%)

Query: 506 QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           ++FS + +S E ++ +FG    A   G PPH GIA G+DRI+M+L GA+ +REV  FP +
Sbjct: 12  KSFSILELSPESIKEKFGFFIDALSFGTPPHLGIALGLDRIMMVLTGAEGIREVIAFPKT 71

Query: 566 QNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           Q   DL+M +P+ +   QL+EL +++  
Sbjct: 72  QKAADLMMNAPAEIMTSQLKELNIKVTS 99


>gi|156040994|ref|XP_001587483.1| hypothetical protein SS1G_11475 [Sclerotinia sclerotiorum 1980]
 gi|154695859|gb|EDN95597.1| hypothetical protein SS1G_11475 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 968

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 2/139 (1%)

Query: 109 ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
            +      +R  P+ +R   R +DLR          ++ I N  R  +  + FIE  TP 
Sbjct: 323 SMDTAHHQKRSLPQRVRLNNRIIDLRTTPAQAIFRIQSGICNLFRSYLDTQGFIEIHTPK 382

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           L   + E        +   + +F A  Q+PQ  KQ+ +A+ F+R ++I   FR ED  + 
Sbjct: 383 LQGGATESGATVFELNYFGRSAFLA--QSPQLAKQMCIAADFERVYEIGAVFRAEDSNTP 440

Query: 229 RLPGEFYQLDMEMSFVEQD 247
           R   E+  LD+EM+  E  
Sbjct: 441 RHLTEYTGLDLEMALEEHY 459



 Score =  102 bits (255), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 66/192 (34%), Gaps = 24/192 (12%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG-IINCNCFEFCW 436
           HL       + + L+    ++   I  +     S   D        LG ++        +
Sbjct: 442 HLTEYTGLDLEMALEEHYHEALTLIDEEDGSVPSETEDLSTRAEIRLGALVKEKYHTDYY 501

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I+D           K   +  PF       +    N         +D+   G EI +GG 
Sbjct: 502 ILD-----------KFPASVRPFYTMPDPDDDRFTN--------SFDIFMRGQEILTGGQ 542

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           R H +E + +     G+  E +          F+ G PPH G   G++R+  L L   N+
Sbjct: 543 RIHDAEFLEKRMKQKGVKPESMPE----YLEGFRWGAPPHAGCGIGLERLTYLFLSLGNI 598

Query: 557 REVSLFPMSQNF 568
           R  SLFP     
Sbjct: 599 RLASLFPRDPKS 610


>gi|189200501|ref|XP_001936587.1| asparaginyl-tRNA synthetase [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187983686|gb|EDU49174.1| asparaginyl-tRNA synthetase [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 601

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 91/245 (37%), Gaps = 36/245 (14%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  + ++G+V  VR    I F  I D   +  V A  D +   +A+ + +   + + G  
Sbjct: 60  GETLTINGYVRTVRKQKRIAFAAIGDGSTLQTVQAVLDPS---LAEGLSTGVAVTVTGKW 116

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDT 137
                +  +        EL    + IL            ++            L  R   
Sbjct: 117 TPSPGQGQSH-------ELQVNNVRILG------DNDAAKKYQTAEFLRTLPHLRSRLPF 163

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP-------------- 183
               +  R+ +   +       +F++C  PI+T+S  EGA +                  
Sbjct: 164 NSLILRLRSLVTAEVTKYFAKHDFVQCHPPIITSSDCEGAGEVFTVAPGAPAVPDKQLSN 223

Query: 184 -SRVNQGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            ++ ++  F+  P+    + Q + + L A   ++ + ++P FR E   + R   EFY L+
Sbjct: 224 QAKQHEDQFFGSPKYLTVSSQLHLEAL-AQSVNKVWALSPTFRAEKSDTARHLSEFYMLE 282

Query: 239 MEMSF 243
            E++F
Sbjct: 283 AELAF 287


>gi|46129360|ref|XP_389041.1| hypothetical protein FG08865.1 [Gibberella zeae PH-1]
          Length = 563

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 63/352 (17%), Positives = 120/352 (34%), Gaps = 27/352 (7%)

Query: 1   MHRYRTHSCGDLGVSDVG-----SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD 55
           +H+  +   G L  S          V + G V+RV   GG+IF+ +R      Q + + D
Sbjct: 116 LHQTDSSVIGTLRKSKDEPTEGVKRVSVQGRVNRVAKQGGLIFVTLRRGVNYMQCLLSGD 175

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLP 113
            +    A ++  E  L I G +    A            EL A    +++ A   +    
Sbjct: 176 LSKTYDALTLSRETSLEIIGELWEVPAGAH----APLDRELRADYFRVIAKAPGGDDAFT 231

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
                +   +     R L LR +     +  R  + ++        +  + S P L  + 
Sbjct: 232 NIVPVDGDNNTLMNLRHLTLRHEKPAAVMFVRDVVEDAFHTVYKELDIKKVSPPALVQTQ 291

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG           + S+  L Q+ Q Y + ++       + I   FR E   + R   E
Sbjct: 292 VEGGSTLFKFDYYGETSY--LTQSSQLYLETVLP-VLGDCYCIEKSFRAEKSLTRRHLSE 348

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           +  ++ E+ F+  D++L+ +E+V+  V +                  +AI++Y  D    
Sbjct: 349 YSHVEAELDFITFDNLLDHLEHVICRVIDLTLENP---------TAAEAIKKYNPDFQKP 399

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
             P +    ++       R        +  +             R   D +N
Sbjct: 400 TRPFLRMRYSDAIDWLRERGIKNEEGNDHTFGDDI----AEAAERKMTDEIN 447



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 47/132 (35%), Gaps = 18/132 (13%)

Query: 446 NEEEKKIDFAHNP-----FTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNH 499
           +E  + I   H P     F M +         D    ++   D++  G  EI  G +R  
Sbjct: 444 DEINRPIFLTHFPVEIKSFYMSKAKD------DPRVTESV--DVLMPGVGEIVGGSMRIW 495

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             E ++  +   GI        +       + G  PHGG   G +R +  LL    VRE 
Sbjct: 496 DYEELMAGYKREGIDPT----GYFWYTDQRKYGSTPHGGYGLGAERFLAWLLKLWTVREA 551

Query: 560 SLFPMSQNFCDL 571
            L+P     C  
Sbjct: 552 CLYPRYMGRCTP 563


>gi|320586573|gb|EFW99243.1| aspartyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 566

 Score =  125 bits (313), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 69/391 (17%), Positives = 124/391 (31%), Gaps = 55/391 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDI-----RDHYGITQVVANP---DSACFEIA 62
           L  + +G  V +  W+ + R     I F+++      D  G+               +  
Sbjct: 77  LDDTYIGKTVIVRAWLQKSRIQSAKIGFVELRKGGNWDIQGVIMASEEAPVISRRMVKWV 136

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--------- 113
            S+  E  + ++  V        +  +    +EL   K  +L+ A  +            
Sbjct: 137 TSINPESFVAVEAKVKQPLEPVKSCRVS--GLELHITKCFVLASAPAMLGMTMGIANQPI 194

Query: 114 --------VFGEREYPESIRFKY----------RFLDL-----RRDTLHKNIVKRTRIIN 150
                     G+ +  ++                 LD      R          R  +  
Sbjct: 195 VNFSDEGAQVGDTDNGKASEAAAENSAPAASMLTHLDNIAMHKRAPVQQAIADIRIEVKK 254

Query: 151 SMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF 210
             R  + A  F E   P L  ++ EG  +        + +F A  Q+PQ YKQ  +A G 
Sbjct: 255 LFRSYLEARRFKEFEPPCLIGAASEGGANVFRLPYFGEEAFLA--QSPQFYKQFEIAGGR 312

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNT 269
           +R F I P FR E+  + R   EF  LD+EM   +   ++++ +E VL  +F        
Sbjct: 313 ERVFCIGPVFRAENSNTPRHMTEFTGLDVEMEIKDSYTEVISILEGVLLSIFRGLQERCA 372

Query: 270 VSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAI 329
           V  + +R  Y            ++R  +      +         F+ +   +        
Sbjct: 373 VEIDTVRSVYHSEPLLLPELGKEVR--LTFAEAQQLLRDEGPPEFANV-RDDEDMSTPQE 429

Query: 330 PAKGGGGNRAF------CDRMNEWARSQGQP 354
            A G      +       D+  E AR     
Sbjct: 430 KALGEVVRTKYKTDFYVIDKFPETARPFYAK 460



 Score = 43.1 bits (100), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 5/119 (4%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF        +  G+ +    A  +D+   G E+ SGG R H    + +   +
Sbjct: 449 KFPETARPFYAKIDDAGTRVGDGVRVTNA--FDMFIRGQEVLSGGQRIHDPAELEERIRD 506

Query: 511 VGISKEVVENRFGGLYRAFQC-GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G++ E    +       F+  G+PPHGG   G+DR+V   L   +V   + +P +   
Sbjct: 507 KGVNPESAGIK--EYLTTFRQVGVPPHGGGGFGLDRVVAWFLALPSVHLAAYYPRTPKR 563


>gi|153801330|ref|ZP_01955916.1| asparaginyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124123155|gb|EAY41898.1| asparaginyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 368

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/298 (15%), Positives = 91/298 (30%), Gaps = 45/298 (15%)

Query: 103 ILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFI 162
           ++   E+       +  +      +   L  R + +      R  +  ++      + + 
Sbjct: 1   VVGWVEDADTYPMAKTRHSIEYLREVAHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYF 60

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ-----------------LL 205
             S P++TAS  EGA +    S ++  +          Y Q                   
Sbjct: 61  WVSAPLITASDAEGAGEMFRVSTLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEA 120

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
            A    + +   P FR E+  + R   EF+ ++ E++F + + +    E++L+ VF+   
Sbjct: 121 YACAISKVYTFGPTFRAENSNTSRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVL 180

Query: 266 N---------------------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNV 302
                                    V ++F ++ Y DAI            P+   +   
Sbjct: 181 AERRDDLEFFNDRINNEVIARLEQFVESDFAQVDYTDAIEILKNCGKTFEFPVEWGIDLA 240

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +EH        F   + V    +            R   D     A     PG+  I 
Sbjct: 241 SEHERFLAEEHFKAPVIVKNYPKDI-----KAFYMRMNEDGKTVAAMDVLAPGIGEII 293



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 5/88 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D++  G  EI  G  R    +++       GI                + G  PH G   
Sbjct: 283 DVLAPGIGEIIGGSQREERLDILDARMREFGIDP----EHMDWYRDLRRYGTVPHAGFGL 338

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G +R+V  + G  NVR+V  FP +    
Sbjct: 339 GFERLVSYVTGMGNVRDVIPFPRTPRSA 366


>gi|289812186|ref|ZP_06542815.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 109

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 1/106 (0%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
           RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2   RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
            +R+E+ + + G V +R A+ +NA++ TG+IE+ A  + I++ A+ 
Sbjct: 62  ELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADS 107


>gi|326427598|gb|EGD73168.1| asparaginyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 506

 Score =  124 bits (312), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 49/286 (17%), Positives = 89/286 (31%), Gaps = 64/286 (22%)

Query: 12  LGVSDVG--SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           L  ++ G  + V   GW+  +R    + F  + D      +         E A+ +    
Sbjct: 17  LQTTEPGHNNTVVARGWLKSLRRQKRVAFAALTDGTTARPLQV---VLSPETAEHLNVGS 73

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            + + G +     +          +EL A  + ++   +    PV G R+          
Sbjct: 74  AVEVSGTLAESPGKGQA-------LELQAANVSVIGDCDTASYPVQG-RDASAEFLRTIP 125

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP------ 183
            + +R  TL   +  R+ +           +F    TPILT++  EG  D          
Sbjct: 126 HMRMRTSTLAAALRVRSCLTQLTHRIFAEWDFASVHTPILTSNDCEGGGDVFSVTAPHHH 185

Query: 184 ------------------------SRVNQGS---------------------FYALPQAP 198
                                   S  N G+                      + L  + 
Sbjct: 186 HRHSESSQPSDGTSDSTGTGGRLRSNRNSGNSGNGSEADDAAAVTTAGLFSRPFHLTVSG 245

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           Q + + +    + R +   P FR E+  + R   EFY L+ EM+F 
Sbjct: 246 QLHAEAIACGAYPRVYTFGPTFRAENSHTPRHLAEFYMLEAEMAFA 291



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 45/132 (34%), Gaps = 20/132 (15%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             +I ++P             A  PF M Q                   DL+  G  E+ 
Sbjct: 387 PVFITNYP------------KAIKPFYMLQDD-----SPPSQGATVAAADLIVPGIGELT 429

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R H  + +    +    +    +          + G  PH G   G +R+++ + G
Sbjct: 430 GGSAREHRLDHLHANITEQLGAAAAAD--LEWYLDLRRFGSVPHAGFGLGFERLLLAVTG 487

Query: 553 AKNVREVSLFPM 564
            KNVR+V  FP 
Sbjct: 488 LKNVRDVIPFPR 499


>gi|323449487|gb|EGB05375.1| hypothetical protein AURANDRAFT_30982 [Aureococcus anophagefferens]
          Length = 551

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/267 (20%), Positives = 88/267 (32%), Gaps = 28/267 (10%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIR---DHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V +   V  VR  G   FL +R   D     Q     ++     +K V        D  V
Sbjct: 95  VWVRARVANVRAKGNSCFLVLRGLDDALETVQCCYFKNADDGARSKDVLKFLADLTDESV 154

Query: 78  MSRSAETINANIIT---GQIELSAQKIEILSVA------------------EELPLPVFG 116
           +      + A++ +     +E+  + + +++ A                  E        
Sbjct: 155 VDARGALVAADVASCSRSTVEIQLKSLFVVTRAPKVLPFLVEDAARSEAVIEASQSTERP 214

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
                +  R  YR+LDLR       +  +  +    R  M    F E  +P L     E 
Sbjct: 215 FASVGQEARLDYRWLDLRTPAQGSVMRVQAAVCKLFRRTMDDAGFTEIHSPKLVGGESES 274

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                       GS   L Q+PQ YKQ L        F++ P FR E+  + R   EF  
Sbjct: 275 GAGVFTTEYF--GSTACLAQSPQLYKQ-LARRDLGAVFEVGPVFRAENSNTRRHLCEFTG 331

Query: 237 LDMEMSFVEQD-DILNTMENVLRGVFE 262
           LD EM       + +       + +FE
Sbjct: 332 LDFEMPITSHYLEAVRVGHRTFKAIFE 358



 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 56/137 (40%), Gaps = 18/137 (13%)

Query: 438 MDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           +DF  +  +    +   A  PF TM     + L         +  YD    G EI SG  
Sbjct: 430 VDF--FVVD----RYPAAIRPFYTMRDPSDDRL---------SNSYDFFLRGQEICSGAQ 474

Query: 497 RNHMSEVMLQAFSNVGISK--EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           R H   ++  A    GI    E +         AF+ G PPH G   G++R+V L LG  
Sbjct: 475 RVHDPAMLEAALKAKGIDPGAEDLSPSLKSYMTAFEHGAPPHAGCGFGLERVVFLYLGLD 534

Query: 555 NVREVSLFPMSQNFCDL 571
           N+R+ SLFP     C  
Sbjct: 535 NIRKASLFPRDPKRCAP 551


>gi|294654499|ref|XP_456557.2| DEHA2A05412p [Debaryomyces hansenii CBS767]
 gi|199428932|emb|CAG84512.2| DEHA2A05412p [Debaryomyces hansenii]
          Length = 553

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 99/255 (38%), Gaps = 15/255 (5%)

Query: 23  LSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           + G +  +R  G  + F+D+       Q++A+        A+           G  +S  
Sbjct: 95  IEGKITSIRKSGKAMYFIDLIQDGAKVQIMASNKLMQM-TAQEFDDAHAFFRKGDFISCV 153

Query: 82  AETINANIITGQIELS-AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLH 139
                 N+  G++ L   + I + S            ++    +    R LD L      
Sbjct: 154 GHPSVTNV--GELSLKLCRPINLASPCLNSMTIPDKIKDRG--LINSNRVLDYLVNADSK 209

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQG-----SFYA 193
           + ++ ++ +I ++R   +  +F+E  TPIL    +   A  F   S   +       +  
Sbjct: 210 QRLMIKSIVIQAIRQFFVKRDFMEVQTPILGGYGTGANAEPFKTISNALKSTGDGSKYLQ 269

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ + + L+ SGFD+ F+I   FR+E   S   P EF   +   SF   ++++   
Sbjct: 270 LRVAPELWLKKLVISGFDKIFEIGQNFRNEGIDSTHNP-EFTTCEFYQSFTNLNELMILT 328

Query: 254 ENVLRGVFEEFSNGN 268
           E +   +F+      
Sbjct: 329 EELFVEIFDTLKEKK 343



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 5/99 (5%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----- 523
           L  +      + +++L   G E  +     +      + F    ++K    +        
Sbjct: 446 LDYDGRSYDISLRFELFIQGKEYVNSYEEENSPFEQSKKFKLQQLTKTQFNDNEMIIPDW 505

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              ++ + G+PP GG   GIDR+ ML  G++ + EV  F
Sbjct: 506 EYIKSMEYGLPPTGGWGCGIDRLCMLFSGSERIEEVLSF 544


>gi|156842373|ref|XP_001644554.1| hypothetical protein Kpol_1003p1 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115200|gb|EDO16696.1| hypothetical protein Kpol_1003p1 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 571

 Score =  124 bits (311), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 58/322 (18%), Positives = 118/322 (36%), Gaps = 27/322 (8%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQV-----------VANPDSACF 59
           +        V ++G +  +R  G  I F+D+ D     QV             N ++   
Sbjct: 84  INEDSTNDIVSINGRIKNIRYSGKKICFIDLYDSNRNDQVLQLIINFNIISKFNQNNLTN 143

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGER 118
           EI     + + +   G  +        +      + L   ++ + LS A+    P    +
Sbjct: 144 EIFTKNINLYKV---GDYIHSIGYPGLSQSHQKNLSLKCNQLPKFLSTAQLPLPP----K 196

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGA 177
               +     R +D + + +  +++ R+ II  +R  +  +NFIE  TPIL   S+   A
Sbjct: 197 LADHNKIKNNRVVDYQVNGVS-SLILRSFIIKQIRSFLDIQNFIEVETPILSNKSNGAHA 255

Query: 178 RDFLV----PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
             F             S   L  +P+ + + L+ SG DR ++I   FR+E       P E
Sbjct: 256 TPFETKLSSMKHDPLQSNLFLRISPELWLKRLIVSGLDRVYEIGKVFRNEGIDQTHNP-E 314

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  L+   S+   +D++N  +++ + +    ++   +  +   +           +    
Sbjct: 315 FTTLEFYQSYASLEDLINQSQDLFKFILLNLNDSKLIHGDAKEVTSKLINELSNNNWKFN 374

Query: 294 RNPIIMHNVTEHFVHSEFRVFS 315
           R   +     E     ++  F 
Sbjct: 375 RVDFLPTLTKEINNGIDYTKFD 396



 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 9/112 (8%)

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV---- 511
           H+P  M        K N    I + +++L  NG E  +     +  +   Q F N     
Sbjct: 455 HHPTVMSPLA----KSNPANPIISKRFELYINGKEYINAYEEENCPQEQEQKFLNQKFVN 510

Query: 512 -GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              +     +       A + GMPP GG+  GIDR+ MLLL  + + EV  F
Sbjct: 511 ENFNDTEALSIDSQYIEAMKWGMPPIGGLGLGIDRLCMLLLNKQRIDEVLSF 562


>gi|326482806|gb|EGE06816.1| lysyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 515

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 17/258 (6%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEI 61
           +Y T    +    D    V L G +   R  G  ++F D+  +    QV+ N        
Sbjct: 93  KYDTIQPDETVEED---TVVLHGRIRSQRTAGKKLVFFDLVHNGHKVQVLCNQRVVGEAG 149

Query: 62  A--KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
              +  +  + L   G   S + +       TG+ EL+ +  E+  +       V   ++
Sbjct: 150 ISPEKFKEFYHLLRRGDSFSVTGKPHR----TGRGELTVKTTELPKLISPCLHDVPVHQK 205

Query: 120 YPESIRFKYRFLDLRR-DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-A 177
             E   ++ R ++L    +    +  R+ I +SMR       F+E +TPIL + S    A
Sbjct: 206 ELEISPYE-RHVELLSSPSAANVLRARSLITHSMRNFFANREFMEVNTPILASKSGGAIA 264

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF--RDEDPRSDRLPGEFY 235
           + F+  +        +L  AP+ + + L+  GFDR F+    F  R+E       P EF 
Sbjct: 265 QPFVTSATEFPDRPLSLRIAPELWLKRLVVGGFDRVFE-NRAFHSRNEGLDKTHNP-EFT 322

Query: 236 QLDMEMSFVEQDDILNTM 253
             +   +F + + ++ T 
Sbjct: 323 TCEFYQAFADLESLIETT 340



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 459 FTMPQGG-----MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG- 512
           F M          +S +  +   I + + +L   G EI +     +      + F     
Sbjct: 387 FIMNHPECMSPLSKSYRHPENGQIVSARAELFVEGKEIMNMYEEENSPFEQRRKFQQQLS 446

Query: 513 -ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               E       G  +  + G+PP GG   GIDR+ ML  GA+ + +V  F
Sbjct: 447 FRDPENAGELDEGYLQTLEWGLPPTGGWGCGIDRVCMLFTGARRISDVLSF 497


>gi|258565823|ref|XP_002583656.1| hypothetical protein UREG_06623 [Uncinocarpus reesii 1704]
 gi|237907357|gb|EEP81758.1| hypothetical protein UREG_06623 [Uncinocarpus reesii 1704]
          Length = 937

 Score =  124 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/252 (21%), Positives = 104/252 (41%), Gaps = 22/252 (8%)

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVA-EELPLPVFGEREYPESIRFKY 128
           +   G ++  +          G++ L A ++  +LS    ++P+        P       
Sbjct: 13  VLTYGTLIKIAIIGKPHRTSRGELTLLANELPTLLSPCLHDVPVDTKEHEVSPYE----- 67

Query: 129 RFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186
           R +    D  +  ++  R+ II  +R   +  NF E STPI+ +++    AR F   +  
Sbjct: 68  RHVQFLADQGVVDSLKARSSIIQHIRNFFLERNFTEVSTPIIASAAGGATARPFHTTASE 127

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
           +     AL  AP+ + + L+  GFDR F+I P FR+E       P EF   +   +F + 
Sbjct: 128 SPDRLLALRIAPELWLKRLIVGGFDRIFEIGPSFRNEGLDKTHNP-EFTTCEFYQAFADL 186

Query: 247 DDILNTMENVLRGVFEEFSNGN-----------TVSNNFLRICYDDAIRR-YGTDKPDLR 294
           + ++    ++L G+  +    N             ++ F ++ +  A+    G   PDL+
Sbjct: 187 ERLMQMTRSILAGISHDIKQLNEKLGTLNPTNADFNSPFQQLDFIPALESAIGRPLPDLK 246

Query: 295 NPIIMHNVTEHF 306
           +     NV   F
Sbjct: 247 SDDATANVVNLF 258



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 34/107 (31%), Gaps = 4/107 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           + E   E       H P  M       +       + A   +L   G E+ +     +  
Sbjct: 282 YLEPRCENPTFIINH-PECMSPLAKSHIHPTCNQVVSARA-ELFVEGKELVNMYEEENSP 339

Query: 502 EVMLQAFSNVG--ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
               + F         E       G  +A + G+PP GG   GIDR+
Sbjct: 340 FEQRRKFEEQLSYRDPENPGELDEGYLQALEWGLPPTGGWGCGIDRL 386


>gi|110589282|gb|ABG77150.1| lysyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 283

 Score =  124 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 72/165 (43%), Gaps = 7/165 (4%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +  +  +G  VR++G +   R  G   F  ++D  G  Q+    D+       +   +W 
Sbjct: 56  EEELESMGLRVRIAGRLMSRRVMGKASFAHVQDMTGRMQLFVQRDALEEGFYNTQFKKWD 115

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           +   G ++   AE +     TG++ +  + I +L+ +   PLP        + +R++ R+
Sbjct: 116 I---GDII--GAEGVLFKTKTGELSVKVESIRLLTKSLR-PLPEKFHGITDQELRYRQRY 169

Query: 131 LDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
           +DL  +    +    RT+++  +R  +    F+E  TP++     
Sbjct: 170 VDLIMNEDSRRTFRIRTQVVQFIRNYLNGRGFMEVETPMMQVIPG 214


>gi|229895866|ref|ZP_04511036.1| Asparaginyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229700789|gb|EEO88818.1| Asparaginyl-tRNA synthetase [Yersinia pestis Pestoides A]
          Length = 246

 Score =  124 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 74/224 (33%), Gaps = 28/224 (12%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACF---EIAKSVRSE 68
           G + VGS V + GWV   R    GI F+ + D      + A  ++      +    + + 
Sbjct: 12  GRAAVGSEVTVRGWVRTRRDSKAGISFVAVYDGSCFDPLQAVVNNTLPNYQDEVLHLTTG 71

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
             + + G V++   E  +        E+ A  I ++   ++        + +      + 
Sbjct: 72  CSVEVTGTVVASPGEGQS-------FEIQATAINVVGWVDDPDTYPMAAKRHSIEYLREV 124

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             L  R + +      R  +  ++        +   STP++TAS  EGA +    S ++ 
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 189 --------------GSFY---ALPQAPQQYKQLLMASGFDRYFQ 215
                           F+   A      Q      A    + F 
Sbjct: 185 ENLPRTDTGAVDFSEDFFGKEAFLTVSGQLNGETYACALSKGFT 228


>gi|195171943|ref|XP_002026761.1| GL27002 [Drosophila persimilis]
 gi|194111700|gb|EDW33743.1| GL27002 [Drosophila persimilis]
          Length = 518

 Score =  124 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 64/424 (15%), Positives = 117/424 (27%), Gaps = 104/424 (24%)

Query: 148 IINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
           II+ +R  +    F+E  TP++   +    A+ F+      +   + +  AP+ Y ++L+
Sbjct: 170 IISYVRQFLDRLGFLEIETPMMNMVAGGATAKPFVTHHNELKMDLF-MRIAPELYHKMLV 228

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
             G DR ++I                                              +F N
Sbjct: 229 VGGLDRVYEIG--------------------------------------------RQFRN 244

Query: 267 GNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEV 326
                 +       +    Y              +  +    +E  +   + S+   Y++
Sbjct: 245 EGIDLTHNPEFTTCEFYMAYA-------------DYADVMDITEQLISGMVKSIRGSYKI 291

Query: 327 WAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEA 386
              P +G  G     D    + R      L            +    P A+  N   T  
Sbjct: 292 KYHP-EGPEGPEQELDFTPPFKRVSMIKTL---------EEKLKVQFPSAETFNTRATTD 341

Query: 387 IRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWN 446
              +L ++           P                    I   C    +I         
Sbjct: 342 FLSQLCVKH----QVECPAPRTTARLLDKLVGEF------IEEECINPTFI--------- 382

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
                     +P  M                   +++L     EI +     +   V  +
Sbjct: 383 --------CEHPQIMSPLAKYHRSAP----GLTERFELFVAKKEICNAYTELNDPVVQRE 430

Query: 507 AFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F      K   ++           A + G+PP GG   GIDR+ M L  + N++EV LF
Sbjct: 431 RFEQQANDKAAGDDEAQMVDENFCTALEYGLPPTGGFGMGIDRLTMFLTDSNNIKEVLLF 490

Query: 563 PMSQ 566
           P  +
Sbjct: 491 PAMK 494


>gi|167948502|ref|ZP_02535576.1| Lysyl-tRNA synthetase class II [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 279

 Score =  124 bits (310), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 72/165 (43%), Gaps = 7/165 (4%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           +  +  +G  VR++G +   R  G   F  ++D  G  Q+    D+       +   +W 
Sbjct: 52  EEELESMGLRVRIAGRLMSRRVMGKASFAHVQDMTGRMQLFVQRDALEEGFYNTQFKKWD 111

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           +   G ++   AE +     TG++ +  + I +L+ +   PLP        + +R++ R+
Sbjct: 112 I---GDII--GAEGVLFKTKTGELSVKVESIRLLTKSLR-PLPEKFHGITDQELRYRQRY 165

Query: 131 LDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
           +DL  +    +    RT+++  +R  +    F+E  TP++     
Sbjct: 166 VDLIMNEDSRRTFRIRTQVVQFIRNYLNGRGFMEVETPMMQVIPG 210


>gi|150866377|ref|XP_001385955.2| asparaginyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149387633|gb|ABN67926.2| asparaginyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 511

 Score =  123 bits (309), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 99/278 (35%), Gaps = 34/278 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK-SVRSEWVLCIDGL 76
            S +   G +  +R      F+D+ D      +     +    ++K  ++    + + G 
Sbjct: 45  DSTILAQGHIKSIRQGKSAGFIDLSDGSAHLSLNVIVKNPLEVLSKLQLKVGQSIQVQGK 104

Query: 77  VMSRSAETINANIITGQIELS------AQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            +            T   E+       A  + ++    E       ++         +  
Sbjct: 105 WVESQG--------TQDYEIVYNFEDVAHSLRVVGDVSEQYPIQ--KKSSSYQFLRNHPT 154

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN--- 187
           L  R  TL   +  R+ + +S+       +F +   P++T+S  EGA +      ++   
Sbjct: 155 LRHRTSTLASLLRFRSFVESSLFEFFNGNSFTKVVPPLITSSDCEGAGEQFSVESLSKLN 214

Query: 188 ----------QGSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                     +  F+          Q    ++A   +R + + PCFR ED  ++R   EF
Sbjct: 215 ESRNKTTLSSEDHFFGKSTYLTVSTQLHLEVLALSLNRVWTLTPCFRAEDSNTNRHLSEF 274

Query: 235 YQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVS 271
           + L+ E+ ++ + + + +  E+++R V          S
Sbjct: 275 WMLEAEICYLGDLNQLTSFTEDMIRHVANSLKQSCNDS 312



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 22/138 (15%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              +I D+P  E             PF MP+      K  D        YDL+     E+
Sbjct: 393 SPVFITDYPTAEK------------PFYMPKS-----KNFDPQRPTVACYDLILPEIGEL 435

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R H    +++   N  ++ + ++          + G  PHGG   G +R++  L 
Sbjct: 436 VGGSMREHNYNNLVEEMKNRNMNLDEMQ----WYLSTRENGTVPHGGFGMGFERLIAYLS 491

Query: 552 GAKNVREVSLFPMSQNFC 569
           G +NV+EV  FP     C
Sbjct: 492 GMENVKEVIPFPRVPQSC 509


>gi|195161004|ref|XP_002021360.1| GL24844 [Drosophila persimilis]
 gi|194118473|gb|EDW40516.1| GL24844 [Drosophila persimilis]
          Length = 507

 Score =  123 bits (309), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 90/261 (34%), Gaps = 17/261 (6%)

Query: 96  LSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155
           L     E++ +A           E    ++   R + +R +   K +  R+ ++ + R  
Sbjct: 159 LHVDYWELIGLAPPGGADAILNEEALPDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRDH 218

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
                + E + P L  +  EG           + +F  L Q+ Q Y +  +       F 
Sbjct: 219 YFDRGYNEVTPPTLVQTQVEGGSTLFKMQFFGEEAF--LTQSSQLYLETCLP-ALGDVFT 275

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ--------DDILNTMENVLRG-----VFE 262
           IA  +R E  R+ R   E+  ++ E  F+          D + + ++ VL+      V E
Sbjct: 276 IAQSYRAEQSRTRRHLAEYTHVEAECPFISYDDLLDRLEDLVCDVVDRVLKSPYGHLVME 335

Query: 263 EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNP 322
              +       F R+ Y  AI     +    ++    +   E    +  R  +  ++   
Sbjct: 336 LNPDFKPPKKPFRRMDYAAAIEWLKKNNV-TKDDGTFYEFGEDIPEAPERKMTDTINEPI 394

Query: 323 GYEVWAIPAKGGGGNRAFCDR 343
               + +  K    +R   D+
Sbjct: 395 LLCRFPVAIKSFYMSRCPEDK 415



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   A   F M +   +      +         L+ N  EI  G +R   SE +L  +  
Sbjct: 398 RFPVAIKSFYMSRCPEDKRLTESVDV-------LLPNVGEIVGGSMRIWDSEELLNGYKR 450

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI        +         G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 451 EGIDPTP----YYWYTDQRIYGTIPHGGYGLGLERFLCWLLNRYHIREVCLYPR 500


>gi|310799281|gb|EFQ34174.1| asparaginyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 523

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 103/264 (39%), Gaps = 44/264 (16%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V L+G+V  VR      F+++ D    T + A    +  E A  +R    + + G  +
Sbjct: 50  KDVVLNGYVRSVRNMKTERFVNVGDGSSRTPIQALVPRSHDESAN-LRVGAAVRLRGSWV 108

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
               E  +  + T                     P+  + + P+ +R     L  R    
Sbjct: 109 PSKTEGQSHELKT--------------------FPIQKKYQTPDYLR-TMPHLRPRIPLN 147

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS-------- 190
              +  R+  I  +     + +F++   PI+T+S  EGA +    +  +  +        
Sbjct: 148 AAILRLRSEAIAVLTQFFASRSFVQTHPPIITSSDCEGAGEVFNVTTGSAETSTTPMSSG 207

Query: 191 --------FYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                   F+  P+    + Q + + L A      + ++P FR E   + R   EFY L+
Sbjct: 208 KDKAAGNLFFRSPKYLTVSSQLHLEAL-AQSLGDVWTLSPTFRAERSDTSRHMSEFYMLE 266

Query: 239 MEMSFVEQDD-ILNTMENVLRGVF 261
            EMSF++  D +++ +E++LR + 
Sbjct: 267 AEMSFIDSMDHVMDLVEDMLRSLA 290



 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 61/160 (38%), Gaps = 22/160 (13%)

Query: 420 IAQELGII-NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           +A+ LG   +   +   ++  +P                 F M +    S   ++     
Sbjct: 376 LAKSLGATNDPGAYSPVFVTHYP------------REIKAFYMRR-SNPSASISEKSGDT 422

Query: 479 AFQYDL-VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR-------FGGLYRAFQ 530
              +DL V +  EIA G +R H  E +L+     G+    V+ R               +
Sbjct: 423 VDCFDLLVPDLCEIAGGSMREHRLEPLLETMQARGMGSPSVDGRGSHSGGDLDWYVDLRR 482

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G  PHGG   G DR++  L+G  NVR+V  FP     CD
Sbjct: 483 WGSNPHGGFGLGFDRLLSYLVGVPNVRDVVAFPRWFGRCD 522


>gi|289812475|ref|ZP_06543104.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 216

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 8/166 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +  +   V ++G +   R  G   F+ ++D  G  Q+    D     +      +W L  
Sbjct: 56  LEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDL-- 113

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G ++    +       TG++ +   ++ +L+ A   PLP        +  R++ R+LDL
Sbjct: 114 -GDILGAKGKLF--KTKTGELSIHCTELRLLTKALR-PLPDKFHGLQDQEARYRQRYLDL 169

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
             +   +N  K R++I+  +R  M+A  F+E  TP++    P GA 
Sbjct: 170 ISNDESRNTFKTRSKILAGIRQFMVARGFMEVETPMMQVI-PGGAS 214


>gi|47094549|ref|ZP_00232210.1| OB-fold nucleic acid binding domain protein [Listeria monocytogenes
           str. 4b H7858]
 gi|47017075|gb|EAL07947.1| OB-fold nucleic acid binding domain protein [Listeria monocytogenes
           str. 4b H7858]
          Length = 121

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 3/122 (2%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
           M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1   MEK-RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59  FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            EIA SVR+E+V+ I G V +R  + IN  + TG++E+ A++I IL+ ++  P  +    
Sbjct: 60  LEIADSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEITILNSSKTPPFYIEDGV 119

Query: 119 EY 120
             
Sbjct: 120 NV 121


>gi|307186072|gb|EFN71804.1| Probable asparaginyl-tRNA synthetase, mitochondrial [Camponotus
           floridanus]
          Length = 419

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 105/341 (30%), Gaps = 59/341 (17%)

Query: 33  HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITG 92
               IF+DI D      +          +   + +   +       S SAE   A   +G
Sbjct: 1   MKDNIFVDISDGSSCEMLQV--------VIPKIVNYDNVSYG---CSISAEGELALAPSG 49

Query: 93  QIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIIN 150
           + EL A  I ++      E   P    ++Y +    +Y  L  R       +  R     
Sbjct: 50  KTELRATNIHVIGTCNVTEDQYPFAPRKKYDQDYVRQYLHLRPRTRRFSSLLRLRDLATM 109

Query: 151 SMRCRMIAENFIECSTPILTASSPEGARDFLVPS--------------------RVNQGS 190
            +   +    FI   TPILT++  EGA +                           N  +
Sbjct: 110 VINDHLRDRGFISVHTPILTSNDCEGAGEVFTVRPHSKEILKDMRKEGQSEDEIYFNTSA 169

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ---- 246
           F        Q    ++A    + +   P FR E+ +S     EFY L+ E++F+      
Sbjct: 170 FL---TVSGQLHLEVVARALTKVYTFGPTFRAENSKSRLHLSEFYMLEGEIAFITYIEEL 226

Query: 247 -----DDILNTMENVLRGVFEEFS-----NGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
                  +    + ++     +       +   V+  F  + Y++A          L+ P
Sbjct: 227 IEEIELLVKEVTKQIIEKGASDLYSIGAPDLRWVNKTFGCLTYEEAFNILNNHANQLQQP 286

Query: 297 IIMHN---------VTEHFVHSEFRVFSKILSVNPGYEVWA 328
           I             + ++       V +   ++ P Y    
Sbjct: 287 IKYGEAFSKEHELFLVKYNDGIPIFVINWPRAIKPFYMKEC 327



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 54/151 (35%), Gaps = 29/151 (19%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            EL ++  N     +++++P             A  PF M +         D   + A  
Sbjct: 297 HELFLVKYNDGIPIFVINWP------------RAIKPFYMKECTD------DSSKVAAL- 337

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+     E+  G IR    + +     ++G                 + G  P GG  
Sbjct: 338 -DLLAPDVGEMIGGSIREDNYQKLKLKLPSMG--------NLSWYLELRKYGNVPTGGFG 388

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G +R +  +LG  N+++   FP   + C+L
Sbjct: 389 MGFERFLQCILGINNIKDTVPFPRWPHNCNL 419


>gi|297795301|ref|XP_002865535.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311370|gb|EFH41794.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 320

 Score =  123 bits (308), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 20/199 (10%)

Query: 88  NIITGQIELSAQKIEILSVA--------------EELPLPVFGEREYPE---SIRFKYRF 130
              T Q+E+  +K+  +S A              EE      GER  P      R   R 
Sbjct: 89  KGTTQQVEIYVRKVFCISKALTQLLLDVDAASQKEEDEQDASGERRTPHVSLDTRLNNRV 148

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LDLR          R+ I N  R  ++A  F    TP L A    G         + + +
Sbjct: 149 LDLRTPANQAIFRVRSHIENFFRQYLLALEFDSIHTPKLLARKINGGASVFCLDYIGKDA 208

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDI 249
             +L Q+ Q +KQ+ ++SGF + F I   FR E   ++R   EF  L++EM      +++
Sbjct: 209 --SLAQSAQLHKQMAISSGFTKVFDIGTYFRSERSSTNRHLTEFVTLNVEMELKYHYNEV 266

Query: 250 LNTMENVLRGVFEEFSNGN 268
           ++ ++ +   +F + +   
Sbjct: 267 MDLVDGLFADIFMQVNQSC 285


>gi|258575071|ref|XP_002541717.1| lysyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237901983|gb|EEP76384.1| lysyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 502

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 92/219 (42%), Gaps = 23/219 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DSACFEIAKSVR 66
           G       ++++G +   R  G  +IF DIR      QV         D       + +R
Sbjct: 126 GEQLRDKQIQIAGRIFTKRSSGAKLIFYDIRAEGVKVQVACQAQESTGDVPFEAQHEHLR 185

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
              ++ I G     S +T +     G++ + AQ++ +L+      +P        +  R+
Sbjct: 186 RGDIIGIIGFPGRTSPKTRD----DGELSIFAQQVILLTPCL-HQIPSEHYGFKDQEQRY 240

Query: 127 KYRFLDLRRDTLHKN-IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPS 184
           + R+LDL  +   +N  V R+++I+ +R      +F+E  TP++ A +    A+ F+   
Sbjct: 241 RQRYLDLIMNDKSRNVFVTRSKMISYIRRYFDERDFVEVETPMMNAIAGGATAKPFITHH 300

Query: 185 RVNQGSFYALPQAPQQYKQLLMA---------SGFDRYF 214
                + + +  AP+ Y ++L+           G++  F
Sbjct: 301 NELDMNLF-MRIAPELYLKMLIVVSGLVKHITGGYETVF 338



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 4/91 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++      EI +     +        F      K   ++           + + G
Sbjct: 380 GLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQARQKAQGDDEAQLVDENFCTSLEYG 439

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +PP GG   GIDR+VM L    +++EV  FP
Sbjct: 440 LPPTGGWGLGIDRLVMFLTDNYSIKEVLAFP 470


>gi|322704418|gb|EFY96013.1| aspartate-tRNA ligase [Metarhizium anisopliae ARSEF 23]
          Length = 453

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 89/212 (41%), Gaps = 10/212 (4%)

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
            A +  A+ +  E ++ + G V   +  +      T    +    ++I+++A      + 
Sbjct: 68  EAVWNKAQKLTPESIVRVTGHVQLVNGSSGANKAYT---IIHVTNLDIIALASPDLPTLR 124

Query: 116 GERE--YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
           G+         R  +R LD+RR          + +   +   + +  F    TP +  ++
Sbjct: 125 GKELSGVGLEERLDHRILDVRRAASGAIFKLHSGMCQLIVEFLCSNGFHWIHTPRIITAT 184

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLP 231
             G  +F       Q ++ A  Q+ Q +KQ+ ++    R F+I P FR E    +S R  
Sbjct: 185 IPGDNEFFHLPYFGQDAWLA--QSSQHHKQMALSMDMQRVFEIGPVFRAEVKSSKSTRHM 242

Query: 232 GEFYQLDMEMSFV-EQDDILNTMENVLRGVFE 262
            EF  LD+ M+F  +  ++   +E++L  VF 
Sbjct: 243 TEFTVLDIAMAFQDDYHEVAELIESMLVFVFR 274


>gi|322787451|gb|EFZ13539.1| hypothetical protein SINV_06357 [Solenopsis invicta]
          Length = 539

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/340 (16%), Positives = 113/340 (33%), Gaps = 28/340 (8%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
              V+L GWVHR+R  G  +IF+ +RD  G  Q V          A  + +E  + + G+
Sbjct: 122 DQRVKLYGWVHRLRRQGKALIFITLRDGTGFLQCVLTDKLCQTYNALILATEAAVQLFGV 181

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  EL     +++  +           E    ++   R + +R +
Sbjct: 182 LKIVPEG----KNAPGGHELCVDYWKLIGPSPAGGADSILNEEALPDVQLDNRHIMIRGE 237

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
              + ++ R+ +  + R       + E + P L  +  EG            G    + +
Sbjct: 238 NTSRILMMRSVLTQAFRDHYKDRGYYEVTPPTLVQTQVEGGSTLFKLDYF--GVLNCILK 295

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
              Q  ++ +         +    +        LP  +  ++ E  F+  D++L+ +E++
Sbjct: 296 HAFQQWEMYIVL-------LNHIGQSSQEHVVTLPSSYTHIEAECPFITFDELLDRLEDL 348

Query: 257 LRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +  V E                N       F R+ Y DAI  Y  +    +     +   
Sbjct: 349 ICDVVERVLQSPLSHLVKELNPNFQVPKKPFKRMNYSDAIE-YLRENNITKEDGSFYEFG 407

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
           E       R  +  ++       +    K    +R   D+
Sbjct: 408 EDIPEMPERKMTDAINEPIMLCRFPAEIKSFYMSRCPEDK 447



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R    + +++ ++   I        +         G  PHGG   G+
Sbjct: 456 LLPNVGEIVGGSMRTWKYDELMEGYNRENIDPTP----YYWYTDQRMYGSCPHGGYGLGL 511

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  LL   ++REV L+P 
Sbjct: 512 ERFLCWLLNRFHIREVCLYPR 532


>gi|323305821|gb|EGA59559.1| Slm5p [Saccharomyces cerevisiae FostersB]
          Length = 492

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 103/277 (37%), Gaps = 32/277 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + ++GW+  +R    I FLD++D   +  +         +  + ++    +   G  +S 
Sbjct: 34  ISINGWIKSIRLLKRIAFLDLQDGTSVNPLRIVIPLTNTDEVQFLK----ILKTGQTLSI 89

Query: 81  S-AETINANIITGQIELS----AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD--- 132
           S A   +        EL      + I+++    E        +          R+L    
Sbjct: 90  SNATWQSTPNRKQPFELQIKNPVKSIKLVGPVSENYPLQKKYQTL--------RYLRSLP 141

Query: 133 ---LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV--- 186
               R   L   +  R+ +           +F + S PILT++  EGA +    S     
Sbjct: 142 TLKYRTAYLSAILRLRSFVEFQFMLYFQKNHFTKVSPPILTSNDCEGAGELFQVSTNTSP 201

Query: 187 ----NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                 G    L  + Q + ++L A    R + ++PCFR E   + R   EF+ L++EM 
Sbjct: 202 TASSYFGKPTYLTVSTQLHLEIL-ALSLSRCWTLSPCFRAEKSDTPRHLSEFWMLEVEMC 260

Query: 243 FVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
           FV   +++ + +E  ++ + +   +          I 
Sbjct: 261 FVNSVNELTSFVETTIKHIIKACIDNQQELLPKQFIS 297



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 46/134 (34%), Gaps = 24/134 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              ++ D+P                PF M Q         D +      +DL+  G  EI
Sbjct: 375 SPVFVTDYP------------RLCKPFYMKQNSTPD----DTVGC----FDLLVPGMGEI 414

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R    + + +     G+++              + G  PHGG   G +R +  L 
Sbjct: 415 IGGSLREDDYDKLCREMKARGMNRSG---ELDWYVSLRKEGSAPHGGFGLGFERFISYLY 471

Query: 552 GAKNVREVSLFPMS 565
           G  N+++   F  +
Sbjct: 472 GNHNIKDAIPFYRT 485


>gi|207347314|gb|EDZ73526.1| YCR024Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 492

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 103/277 (37%), Gaps = 32/277 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + ++GW+  +R    I FLD++D   +  +         +  + ++    +   G  +S 
Sbjct: 34  ISINGWIKSIRLLKRIAFLDLQDGTSVNPLRIVIPLTNTDEVQFLK----ILKTGQTLSI 89

Query: 81  S-AETINANIITGQIELS----AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD--- 132
           S A   +        EL      + I+++    E        +          R+L    
Sbjct: 90  SNATWQSTPNRKQPFELQIKNPVKSIKLVGPVSENYPLQKKYQTL--------RYLRSLP 141

Query: 133 ---LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV--- 186
               R   L   +  R+ +           +F + S PILT++  EGA +    S     
Sbjct: 142 TLKYRTAYLSAILRLRSFVEFQFMLYFQKNHFTKVSPPILTSNDCEGAGELFQVSTNTSP 201

Query: 187 ----NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                 G    L  + Q + ++L A    R + ++PCFR E   + R   EF+ L++EM 
Sbjct: 202 TASSYFGKPTYLTVSTQLHLEIL-ALSLSRCWTLSPCFRAEKSDTPRHLSEFWMLEVEMC 260

Query: 243 FVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
           FV   +++ + +E  ++ + +   +          I 
Sbjct: 261 FVNSVNELTSFVETTIKHIIKACIDNQQELLPKQFIS 297



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 46/134 (34%), Gaps = 24/134 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              ++ D+P                PF M Q         D +      +DL+  G  EI
Sbjct: 375 SPVFVTDYP------------RLCKPFYMKQNSTPD----DTVGC----FDLLVPGMGEI 414

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R    + + +     G+++              + G  PHGG   G +R +  L 
Sbjct: 415 IGGSLREDDYDKLCREMKARGMNRSG---ELDWYVSLRKEGSAPHGGFGLGFERFISYLY 471

Query: 552 GAKNVREVSLFPMS 565
           G  N+++   F  +
Sbjct: 472 GNHNIKDAIPFYRT 485


>gi|6319872|ref|NP_009953.1| Slm5p [Saccharomyces cerevisiae S288c]
 gi|135160|sp|P25345|SYNM_YEAST RecName: Full=Asparaginyl-tRNA synthetase, mitochondrial; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS; Flags:
           Precursor
 gi|1907168|emb|CAA42316.1| asn-tRNA synthetase, mitochondrial [Saccharomyces cerevisiae]
 gi|151943844|gb|EDN62144.1| conserved protein [Saccharomyces cerevisiae YJM789]
 gi|190406459|gb|EDV09726.1| asparaginyl-tRNA synthetase, mitochondrial precursor [Saccharomyces
           cerevisiae RM11-1a]
 gi|256269678|gb|EEU04950.1| Slm5p [Saccharomyces cerevisiae JAY291]
 gi|285810718|tpg|DAA07502.1| TPA: Slm5p [Saccharomyces cerevisiae S288c]
 gi|323338576|gb|EGA79795.1| Slm5p [Saccharomyces cerevisiae Vin13]
 gi|323356011|gb|EGA87818.1| Slm5p [Saccharomyces cerevisiae VL3]
          Length = 492

 Score =  122 bits (307), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 103/277 (37%), Gaps = 32/277 (11%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           + ++GW+  +R    I FLD++D   +  +         +  + ++    +   G  +S 
Sbjct: 34  ISINGWIKSIRLLKRIAFLDLQDGTSVNPLRIVIPLTNTDEVQFLK----ILKTGQTLSI 89

Query: 81  S-AETINANIITGQIELS----AQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD--- 132
           S A   +        EL      + I+++    E        +          R+L    
Sbjct: 90  SNATWQSTPNRKQPFELQIKNPVKSIKLVGPVSENYPLQKKYQTL--------RYLRSLP 141

Query: 133 ---LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV--- 186
               R   L   +  R+ +           +F + S PILT++  EGA +    S     
Sbjct: 142 TLKYRTAYLSAILRLRSFVEFQFMLYFQKNHFTKVSPPILTSNDCEGAGELFQVSTNTSP 201

Query: 187 ----NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                 G    L  + Q + ++L A    R + ++PCFR E   + R   EF+ L++EM 
Sbjct: 202 TASSYFGKPTYLTVSTQLHLEIL-ALSLSRCWTLSPCFRAEKSDTPRHLSEFWMLEVEMC 260

Query: 243 FVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
           FV   +++ + +E  ++ + +   +          I 
Sbjct: 261 FVNSVNELTSFVETTIKHIIKACIDNQQELLPKQFIS 297



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 46/134 (34%), Gaps = 24/134 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              ++ D+P                PF M Q         D +      +DL+  G  EI
Sbjct: 375 SPVFVTDYP------------RLCKPFYMKQNSTPD----DTVGC----FDLLVPGMGEI 414

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             G +R    + + +     G+++              + G  PHGG   G +R +  L 
Sbjct: 415 IGGSLREDDYDKLCREMKARGMNRSG---ELDWYVSLRKEGSAPHGGFGLGFERFISYLY 471

Query: 552 GAKNVREVSLFPMS 565
           G  N+++   F  +
Sbjct: 472 GNHNIKDAIPFYRT 485


>gi|326513972|dbj|BAJ92136.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 298

 Score =  122 bits (307), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 72/198 (36%), Gaps = 21/198 (10%)

Query: 93  QIELSAQKIEILSVAEELPLPVFGE------------------REYPESIRFKYRFLDLR 134
           Q+E+   KI   + A       F +                      +  R  YR +D+R
Sbjct: 1   QVEIRVSKIYCTNRAISTLPLNFEDAARTKAEFEAAEQKGVPMVHVHQDTRLNYRPIDIR 60

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
                        + N  R  + ++NFI   TP L   S EG            G    L
Sbjct: 61  TPANLSTFSIEHHVENKFREFLFSKNFIGIHTPKLIGGSSEGGASVFKLDYN--GQPACL 118

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTM 253
            Q+PQ YKQ+ +  GF R F++   FR E   + R   EF  LD EM   E   ++ + +
Sbjct: 119 AQSPQLYKQMAICGGFGRVFEVGSIFRAEKSNTHRHLCEFIGLDAEMEIKEHYFEVCDII 178

Query: 254 ENVLRGVFEEFSNGNTVS 271
           + +   +F+  +      
Sbjct: 179 DGLFVAIFDHLNEHCKEE 196


>gi|322692331|gb|EFY84252.1| aspartate-tRNA ligase [Metarhizium acridum CQMa 102]
          Length = 480

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 95/234 (40%), Gaps = 10/234 (4%)

Query: 37  IFLDIRDHYGITQVVANPDSACFEI---AKSVRSEWVLCIDGLVMSRSAETINANIITGQ 93
           + L++R      +   +  +    +   A+ +  E ++ + G V      +         
Sbjct: 46  LRLELRTRETFVEATLDAKAIAEAVWHKAQKLTPESIVRVSGHVQLVHGNSETGGNKAYT 105

Query: 94  IELSAQKIEILSVAEELPLPVFGERE--YPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
             +    ++++++A      V G+         R  +R LD+RR          + +   
Sbjct: 106 TTVHVTNLDVIALASPDLPTVRGKELPGVGLEDRLDHRILDVRRSASGAIFKLHSSMCQL 165

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFD 211
           +   + +  F    TP +  ++  G  ++       + ++ A  Q+ Q +KQ+ ++    
Sbjct: 166 IVEFLCSNGFHWIHTPRIITATIPGDNEYFHLPYFGKDAWLA--QSSQHHKQMALSMDMQ 223

Query: 212 RYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFE 262
           R F+I P FR E    +S R   EF  LD+ M+F  +  +++  +E++L  VF 
Sbjct: 224 RVFEIGPVFRAEVKSTKSTRHMTEFTVLDIAMAFQDDYHEVVELIESMLVFVFR 277



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 2/103 (1%)

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN--VGISKEVVENRFGGLYRA 528
            N      +  +D +  G EI SG  R +  + + +A      G   +    ++     A
Sbjct: 378 ANPDAPGLSNTWDTIVGGREICSGSQRINSYDELCEAMRAGVCGPPLDPEAEKWQPYLAA 437

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           F+ GMP HGG   G++R++   LG  +VREV+LFP   N    
Sbjct: 438 FKSGMPRHGGCGLGVNRLLQGFLGLDDVREVTLFPRDVNRLKP 480


>gi|297790381|ref|XP_002863084.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308901|gb|EFH39343.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 320

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 20/199 (10%)

Query: 88  NIITGQIELSAQKIEILSVA--------EELPLPVFGER---------EYPESIRFKYRF 130
              T Q+E+  +K+  +S A        +        E+               R   R 
Sbjct: 89  KGTTQQVEIYVRKVFCISKALTQLLLDVDAASQKEEDEQGASGERRTPHVSLDTRLNNRV 148

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           LDLR          R+ I N  R  ++A  F    TP L A    G         + + +
Sbjct: 149 LDLRTPANQAIFRVRSHIENFFRQYLLALEFDSIHTPKLLARKINGGASVFCLDYIGKDA 208

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDI 249
             +L Q+ Q +KQ+ ++SGF + F I   FR E   ++R   EF  L++EM      +++
Sbjct: 209 --SLAQSAQLHKQMAISSGFTKVFDIGTYFRSERSSTNRHLTEFVTLNVEMELKYHYNEV 266

Query: 250 LNTMENVLRGVFEEFSNGN 268
           ++ ++ +   +F + +   
Sbjct: 267 MDLVDGLFADIFMQVNQSC 285


>gi|254576865|ref|XP_002494419.1| ZYRO0A01034p [Zygosaccharomyces rouxii]
 gi|238937308|emb|CAR25486.1| ZYRO0A01034p [Zygosaccharomyces rouxii]
          Length = 501

 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 62/367 (16%), Positives = 137/367 (37%), Gaps = 37/367 (10%)

Query: 22  RLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPD----SACFEIAKSVRSEWVLCIDGL 76
            L G +  VR  G  + FLD+    G+  V+ + +    +    +A+  R+   + + G 
Sbjct: 57  SLHGRICGVRSAGKNMCFLDL---GGLQVVMNSKEMAERNDGLNLAQRYRAGDYVLVSG- 112

Query: 77  VMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLD--L 133
              R   T         + + A+K   +L+ A++   P   +R    +   + R LD  L
Sbjct: 113 ---RPGLTERQRT----LSIRAEKPPTVLAAAQQPLPPSLEDR----AKLKQNRVLDYQL 161

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSF- 191
               +   +V R ++  ++R  +   +F+E  TPIL   ++   A  F+  S     +  
Sbjct: 162 SGVEM---LVTRHKVTRAVREFLDGRDFVEVETPILSNKANGASAEAFVTYSNALPENEK 218

Query: 192 -YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  AP+ + + L+  G +R +++   FR+E   +   P EF  L+   ++V  +D++
Sbjct: 219 RLELRVAPELWLKRLIIGGLERVYELGKVFRNEGIDATHNP-EFTTLEFYQAYVTMEDLI 277

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
             + ++L  +    S           +           D  D  +     +       S 
Sbjct: 278 ENVRDMLVHICSAVSGLPMAQRL---LSELQTKGLQRLDFVDTLSKETGTDFHGIQDWSN 334

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVA 370
             +  +   +    +++    +    ++ +      +   +   GL           + +
Sbjct: 335 PELLWEATPIKDRSKLFPEGPQALSPSQMWNRLGGYYVEDRHCNGLCPTLV----CNHPS 390

Query: 371 GMGPVAK 377
            + P+AK
Sbjct: 391 IISPLAK 397



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 5/106 (4%)

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
               + S       +  + ++++   G E  +     +  +  LQ+F +   S     ++
Sbjct: 387 NHPSIISPLAKPNDNRLSKRFEMFIGGKEYINAYEEENCPQRQLQSFKDQAQSLLQYGDK 446

Query: 522 -----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                      A + GMPP GG+  GIDR+V LLLG+  + EV  F
Sbjct: 447 ESLSVDEAYVEAMKWGMPPTGGVGLGIDRLVALLLGSTRIEEVLAF 492


>gi|218509745|ref|ZP_03507623.1| lysyl-tRNA synthetase [Rhizobium etli Brasil 5]
          Length = 340

 Score =  122 bits (305), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 67/160 (41%), Gaps = 3/160 (1%)

Query: 126 FKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS 184
           ++ R LD+  +   K    +R++I++ +R  M  + F+E  TP+L +       +     
Sbjct: 1   YRKRHLDIMTNEDSKLRFQQRSKIVSGIRRFMENDGFMEVETPMLQSIYGGATAEPFKTH 60

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                    L  AP+ + +  + SG  D+ F+I   FR+E   +   P EF  ++   ++
Sbjct: 61  HNTLKLDMYLRIAPELFLKRTLVSGLTDKVFEINRNFRNEGVSTRHNP-EFTMMECYWAY 119

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
            + +D+++ +E +   +               R+ +    
Sbjct: 120 ADYEDMMDVVERLFETLALSIHGTTEFDFGDKRLSFKGPF 159



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 7/133 (5%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMS 501
           +E   E   I  +H   T     +           +   +++  CN +E+ +     +  
Sbjct: 210 FEEKVEATLIQPSH--VTHFPKDISPFAKEVPGEPRLVERFETYCNAWELGNAFSELNDP 267

Query: 502 EVMLQAFSNVGISKEVVENR----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   +              +          A   GMPP GG+  G+DR++MLL  A ++R
Sbjct: 268 EEQRRRMVEQLEQAHARGEKEKQLDEEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIR 327

Query: 558 EVSLFPMSQNFCD 570
           +V LFP  +N  D
Sbjct: 328 DVILFPARRNKAD 340


>gi|321309588|ref|YP_004191917.1| lysyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801432|emb|CBY92078.1| lysyl-tRNA synthetase (class II) [Mycoplasma haemofelis str.
           Langford 1]
          Length = 480

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 96/252 (38%), Gaps = 21/252 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           +++    + L G +  +R      F  +R+ +   Q+            +S+     + I
Sbjct: 51  LTENNISISLIGRLVSIREP----FATLREEWHDLQIYFKKGD-----LESLDVGDFVFI 101

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           DG +              G + L AQ   ++S     P P        + I+ + R +  
Sbjct: 102 DGTL---------FKTKKGTLTLRAQSCRVVSKCL-NPFPSQYYGIKDKEIQLRNRVVHC 151

Query: 134 RRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
             D    N  K R +II  +R  +    ++E  TPIL ++                 S +
Sbjct: 152 LVDQDVFNTFKFRAKIIRYIRNFLDDRGYLEFETPILESNYGGANAVPFRTHYKALKSDF 211

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  A +   + ++ SGF + ++I   FR+E   S   P EF  +++       D++++ 
Sbjct: 212 FLRIATEISLKKIIISGFSKVYEIGRVFRNEGIDSTHNP-EFTSIEIYTVNHGLDEVMDL 270

Query: 253 MENVLRGVFEEF 264
            E++ + V  E 
Sbjct: 271 TESLFKHVSREL 282



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 7/131 (5%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHM 500
            +E   E+  +D      T     +  L   D  +     +Y+L   G E ++G    + 
Sbjct: 352 LFEELVEKDLVDPTF--VTGFHKDVSPLSKADPQNPNFTLRYELYIGGKEFSNGFAELND 409

Query: 501 SEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
            +  L+ F      +++              A + G+PP GGI  GIDR+VML    K++
Sbjct: 410 PDDQLERFKKQVEERDLGNEEAFDVDYEYIEAMKYGLPPTGGIGIGIDRLVMLFTEKKSI 469

Query: 557 REVSLFPMSQN 567
           ++V  FP  + 
Sbjct: 470 KDVIFFPQLKK 480


>gi|213400759|gb|ACJ47028.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Nasonia
           vitripennis]
          Length = 168

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 68/172 (39%), Positives = 96/172 (55%), Gaps = 7/172 (4%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           GEFYQLD+EMSFV Q+DI + +E+ L  VF +FS   +V  +F RI Y +A+ +YG+DKP
Sbjct: 1   GEFYQLDLEMSFVTQEDIFDVIESALYKVFAKFS-RKSVDKDFPRITYKEAMLKYGSDKP 59

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA-RS 350
           DLRNP+++ +VTE F  S F +F   +           P K     R+F D+  E A + 
Sbjct: 60  DLRNPLLISDVTEIFRDSGFNIFKSNIERGMVVRAIPAP-KTAEEPRSFFDKKIEHAQKE 118

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            G  GL YI +      +    GP+AK L+      IR   +++ GDS FF 
Sbjct: 119 FGAKGLGYITF----DKDGTAKGPIAKFLDENRLNHIREATNIEPGDSVFFA 166


>gi|322712664|gb|EFZ04237.1| aspartyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 567

 Score =  121 bits (304), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 69/388 (17%), Positives = 123/388 (31%), Gaps = 58/388 (14%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDI-----RDHYGITQVVANP---DSACFEIAKSVRSEW 69
             V +  W+ + R     + F+++      D  G+               +   S+  E 
Sbjct: 80  KTVIVRAWLQKSRVQSAKMGFVELRKGGNWDIQGVIMASDEEPLVSRRMVKWVASINPES 139

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE-----------------ELPL 112
            + ++  V        +  +     EL   K  +L+ A                      
Sbjct: 140 FVAVEAKVKKPLEPVKSCRVS--GFELHITKCFVLAPAPAVLGMTIGTASQPIVNFSDES 197

Query: 113 PVFGEREYPE--SIRFKYR--------FLDL-----RRDTLHKNIVKRTRIINSMRCRMI 157
              G+ +  +      ++          LD      R          R  +    R  + 
Sbjct: 198 DQAGDVDAGKAAEAASEHTAPAASMLTHLDNIAMHKRAPVQQAIADIRIEVKRLFRSYLD 257

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
           +  F E   P L  ++ EG  +    +   + +F A  Q+PQ YKQ  +A G +R F I 
Sbjct: 258 SRGFKEFEPPCLIGAASEGGGNVFRLAYFGEEAFLA--QSPQFYKQFEIAGGRERVFSIG 315

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           P FR E+  + R   EF  LD+EM   E   ++++T+E VL  +F        +      
Sbjct: 316 PVFRAENSNTPRHMTEFTGLDLEMEIKESYTEVISTLEGVLLSIFRGIQVLPPIERCANE 375

Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNVT-----EHFVHSEFRVFSKILSVN----PGYEVW 327
           I    A+  Y ++   L  P     +T     +         F+ +        P  +  
Sbjct: 376 IETVRAV--YHSEPLLLPEPGKEVRLTFAEAQKLLREEGPPEFANVRDDEDMSTPQEKAL 433

Query: 328 AIPAKGGGGNRAF-CDRMNEWARSQGQP 354
               +       F  D+  E AR     
Sbjct: 434 GQVVRAKYKTDFFVVDKFPETARPFYAK 461



 Score = 41.6 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 7/120 (5%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF        +  G+ +    A  YD+   G E+ SGG R H    +     +
Sbjct: 450 KFPETARPFYAKLDDAGTTVGDGVRVTNA--YDMFLRGQEVLSGGQRIHDPVELEARIRS 507

Query: 511 VGISKEV--VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G+  +   ++       +         G     +DR+V  +LG  +V   + +P +   
Sbjct: 508 KGVDPKSGGIKEYLATFQQVGVPPHGGGGIG---LDRVVAWILGLPSVHLAAYYPRTPKR 564


>gi|258614293|ref|ZP_05712063.1| lysyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 209

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 18/177 (10%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            +++G    ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSEELHELFDPRTKEELAEMGLTASVAGRMMTRRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
           D    E  +  +   +    G     + + +     TG++ + A +I ILS A   PLP 
Sbjct: 100 DQVGDEAYEVFKHADL----GDFFGVTGQIM--KTDTGEVSIKASEITILSKALR-PLPD 152

Query: 115 FGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIINSMRCRMIAENFIECSTPILT 170
                     R++ R+LDL  +       +KR++II+ +R  +    +IE  TP+L 
Sbjct: 153 KYHGLTNIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYLDGNGYIEVETPVLH 209


>gi|326500930|dbj|BAJ95131.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 285

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 72/199 (36%), Gaps = 21/199 (10%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGE------------------REYPESIRFKYRFLDL 133
            Q+E+   KI   + A       F +                      +  R  YR +D+
Sbjct: 1   QQVEIRVSKIYCTNRAISTLPLNFEDAARTKAEFEAAEQKGVPMVHVHQDTRLNYRPIDI 60

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R             + N  R  + ++NFI   TP L   S EG            G    
Sbjct: 61  RTPANLSTFSIEHHVENKFREFLFSKNFIGIHTPKLIGGSSEGGASVFKLDYN--GQPAC 118

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNT 252
           L Q+PQ YKQ+ +  GF R F++   FR E   + R   EF  LD EM   E   ++ + 
Sbjct: 119 LAQSPQLYKQMAICGGFGRVFEVGSIFRAEKSNTHRHLCEFIGLDAEMEIKEHYFEVCDI 178

Query: 253 MENVLRGVFEEFSNGNTVS 271
           ++ +   +F+  +      
Sbjct: 179 IDGLFVAIFDHLNEHCKEE 197


>gi|302308332|ref|NP_985218.2| AER362Wp [Ashbya gossypii ATCC 10895]
 gi|299789404|gb|AAS53042.2| AER362Wp [Ashbya gossypii ATCC 10895]
          Length = 525

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/265 (20%), Positives = 105/265 (39%), Gaps = 18/265 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
             G L   +      ++G +  +R  G  + F+D++      Q++ N      ++     
Sbjct: 66  YVGKLSNDEPERTYVINGQIRGIRVVGRSMCFVDLQQQGSALQLIVNHSLVRAQVGDKAA 125

Query: 67  SEWVLCIDGLVMSRSAETINANIITG------QIELSAQKIEILSVAEELPLPVFGEREY 120
            +  +        R  + + A    G       + L  +++  +  A ++ +P    R  
Sbjct: 126 FQDAIAG-----LRPGDHVQATGFPGLSKTERTLSLKCREVPRMLAAAQIAIPQ---RLT 177

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARD 179
               R + R LD   + L K +  R + + ++R  +    F+E  TP+L+A SS   A  
Sbjct: 178 DRVKRQQNRTLDYLVNGL-KVLEFRHKALTALRAYLNRRGFLEVETPMLSAKSSGANATP 236

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+   R        L  AP+ + + L   G  R ++I   FR+E   +   P EF  L++
Sbjct: 237 FVTHLRGQDKQALELRIAPELWLKRLCVGGAQRVYEIGKVFRNEGIDATHNP-EFTTLEL 295

Query: 240 EMSFVEQDDILNTMENVLRGVFEEF 264
              +   D++L   + +LR +    
Sbjct: 296 YQCYAPLDELLELAQVLLRDICVAV 320



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 12/115 (10%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
              H+P  M      +          A +++L   G E+ +     +  +  L+      
Sbjct: 409 AILHHPAVMSPLAKSAGL-------VANRFELFVCGRELINAYEEENCPQEQLKKMQLQQ 461

Query: 513 ISKEVVENRFG-----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             +E   ++           A + GMPP GG+  GIDR+ MLLL    + EV  F
Sbjct: 462 RHREQFHDQESMQIDHHYIEAMKYGMPPIGGLGLGIDRLCMLLLAKARIEEVLPF 516


>gi|301321351|gb|ADK69994.1| conserved domain protein [Mycoplasma mycoides subsp. mycoides SC
           str. Gladysdale]
          Length = 86

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 32/85 (37%), Positives = 50/85 (58%)

Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            F  + ++KE VE  FG    A++ G P H GIA G+DRI M+L  A+++R+V  FP + 
Sbjct: 1   MFDTIELTKERVETNFGWFMNAYKYGAPYHSGIAWGLDRIAMILTNAQSIRDVIAFPKNS 60

Query: 567 NFCDLLMGSPSTVSVEQLRELGLRI 591
           +  D +  +P  V  +QL EL ++ 
Sbjct: 61  SGIDPMSNAPDLVDQKQLDELHIKT 85


>gi|156102184|ref|XP_001616785.1| lysine-tRNA ligase [Plasmodium vivax SaI-1]
 gi|148805659|gb|EDL47058.1| lysine-tRNA ligase, putative [Plasmodium vivax]
          Length = 677

 Score =  121 bits (303), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 105/258 (40%), Gaps = 14/258 (5%)

Query: 39  LDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSA 98
            +  D  G   +         E         V  I  +    + +        G+I L  
Sbjct: 206 ANGTDGGGRQFLAGTEG----ETPHKANPVSVRKIVEVGDFVAVKGFVRKSQRGEITLHT 261

Query: 99  QKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMI 157
           ++I +L+ +  LPLP   +       +++ R+LD L      + I+ R  +I  +R  ++
Sbjct: 262 EEIFLLTKSL-LPLPDKYKGMKDVEFKYRKRYLDFLINKEEKEKIITRFAVIQEIRKLLL 320

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQI 216
            + +IE  TPIL +     +         +      L  AP+ + + L+ SG  ++ F+ 
Sbjct: 321 RKKYIEVDTPILQSIPGGASAKPFETFLKSLNLVLYLRIAPELFLKKLIISGISEQIFEF 380

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS------NGNTV 270
           + CFR+E   +   P EF  L++  ++     ++  +E +++ V ++F+      NG   
Sbjct: 381 SKCFRNEGLSTIHNP-EFTLLEIYKAYSNYKYMIKFVERLIKKVLKKFTLRSTVHNGLPY 439

Query: 271 SNNFLRICYDDAIRRYGT 288
              + +I +   ++ Y  
Sbjct: 440 QKRWKKISFIKIVKDYTC 457



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 27/59 (45%)

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            Q  S +   +            A   G+PP GG+  GIDR+ MLL  + +++ V  FP
Sbjct: 614 EQISSKIQHVQNDSHEIDYDYVTALAHGLPPTGGLGIGIDRLCMLLTNSSSIKNVLPFP 672


>gi|255718281|ref|XP_002555421.1| KLTH0G08954p [Lachancea thermotolerans]
 gi|238936805|emb|CAR24984.1| KLTH0G08954p [Lachancea thermotolerans]
          Length = 524

 Score =  121 bits (303), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 104/266 (39%), Gaps = 16/266 (6%)

Query: 7   HSCGDLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSV 65
             C DL          L   V  VR  G  + F+D+      TQ++ N +      A   
Sbjct: 56  KYC-DLEHDRPDLREVLRARVDSVRVAGKNMCFVDVSSARCSTQLILNYNVMAAHAAPGA 114

Query: 66  RSEW-VLCIDGLVMSRSAETINANIITGQ------IELSAQKIE-ILSVAEELPLPVFGE 117
            +         +   R  + + A    G+      + L   ++  +L+ A     P    
Sbjct: 115 AALSRQQFFQHVQDLRPGDHVQACGFPGRSQRERTLSLKCTQLTTLLAPALRALPP---- 170

Query: 118 REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA 177
           R    + R + R LD   +  H  +  R  +++++R  + A  F+E  TP+L+  +   A
Sbjct: 171 RLSDPAKRNQNRVLDYLVNG-HDALRVRHSVLSALREFLDARGFLEAETPVLSPKANGAA 229

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
            +          +   L  AP+ + + L+ +G DR +++   FR+E   +   P EF  L
Sbjct: 230 AEPFTTRTNATNAALQLRVAPELWLKRLVVAGVDRVYELGRVFRNEGVDASHNP-EFTTL 288

Query: 238 DMEMSFVEQDDILNTMENVLRGVFEE 263
           +   ++   +D++   E +L  V E 
Sbjct: 289 EFYQTYASMEDLIALAEQLLLHVLER 314



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 8/112 (7%)

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           H+P  M      +    D   +   ++++   G E  +     +  +  LQ F     ++
Sbjct: 407 HHPTVMSP---LAKGNPDDDMLTTKRFEVFIGGKEYINAYEEENCPQAQLQKFEAQQQAQ 463

Query: 516 EVVENRFG-----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           E   +R           A + GMPP GG   GIDR+ MLL G   +  V  F
Sbjct: 464 EAYGDRESLAIDHAYVDAMKWGMPPIGGFGVGIDRLCMLLTGDTRIERVLSF 515


>gi|309359933|emb|CAP32090.2| CBR-NARS-2 protein [Caenorhabditis briggsae AF16]
          Length = 426

 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 89/251 (35%), Gaps = 27/251 (10%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           RL GW   V+  G  +F+ + D    + +         EIA  V+    +   G +    
Sbjct: 16  RLDGWAKSVQKSGKSVFVKVDDGRTNSLIQLVASK---EIANKVKVGSAIRAVGSLEKSL 72

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                      + E  A ++ ++   E          +       K   L  R       
Sbjct: 73  GSQ-------QETEFVASELRVVGQDENARYD-----DLSADNLRKKTHLRARNVQFAAF 120

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY--------- 192
           +  R+ I        ++ +FI   TP LT +  EG  +       +  +           
Sbjct: 121 LRLRSTIFRETHEFFMSRDFIHIDTPKLTRNDCEGGGEVFDVVTTSSEALNGSEGVKEDP 180

Query: 193 -ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDIL 250
             L  + Q + + L  S   R + + P FR E  +S     EF+ L+ E++FV   D++ 
Sbjct: 181 IYLSVSSQLHLEAL-VSRLQRVYTLGPAFRAEKQQSHAHLSEFHMLEAEVAFVETIDEMC 239

Query: 251 NTMENVLRGVF 261
             +E+ ++ +F
Sbjct: 240 ELVESYVQHMF 250



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 36/169 (21%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+   +     K  + +         EL ++  +     ++  +P               
Sbjct: 286 DAVKLLTSKGSKVTAKSG---LSKKNELDLVKYHNNLPVFVTHYP------------TNQ 330

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISK 515
            PF M +   E+             +DL+  G  E+A G +R   +E +      +    
Sbjct: 331 KPFYMARTKDET---------STLSFDLLVPGVGELAGGSVREPDAEKLKSRGCGIE--- 378

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                         + G PP  G   G +R++  +LG +N+++   FP 
Sbjct: 379 --------WYLDTRRRGQPPTAGFGIGFERLLQYMLGIQNIKDTLAFPR 419


>gi|260578976|ref|ZP_05846879.1| lysine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258602950|gb|EEW16224.1| lysine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 1050

 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 51/246 (20%), Positives = 101/246 (41%), Gaps = 28/246 (11%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R+SG +   R  G + F+D+RD  G  QV+   ++   E+A  +R+  +  +  +V +R 
Sbjct: 635 RISGRIVAKREFGAVSFIDLRDASGKCQVLV--EAPGEELAARMRALDLGDLIAVVGTRG 692

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                    TG+  L A+ IE+   A++L           E               ++  
Sbjct: 693 HS------RTGEPSLLAEAIEL--EAKDLHPLTRRGAGIGE---------------VNAR 729

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           +  R+ +  ++R  +    F+E  TPIL        AR F   S       Y L  AP+ 
Sbjct: 730 LRARSVVNAAIRRTLGDLGFMEVETPILQRVHGGANARPFRTRSNAANQDLY-LRIAPEL 788

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  G ++ +++   FR+E   +   P EF  ++   +  + + +    + +++  
Sbjct: 789 YLKRLLTQGAEKVYELGRVFRNEGVDATHNP-EFTTVEAYEAHSDYESMRWVAQRIIQAA 847

Query: 261 FEEFSN 266
              +  
Sbjct: 848 ATAYHG 853



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 63/195 (32%), Gaps = 28/195 (14%)

Query: 379  LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
            ++    ++I    + +       + G   +    + +    + + L  + C      +  
Sbjct: 880  ISEKVGQSITPETNFETLLELCAVHGIATQPGWDSGEVVQEMYEAL--VECTTTMPTFYT 937

Query: 439  DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            DFP             + +P T                  A ++DLV  G E+ +     
Sbjct: 938  DFP------------TSVSPLTRQHRS---------QPGVAERWDLVAWGVELGTAYSEL 976

Query: 499  HMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
                          +                 RA + GMPP GG+  G+DR++MLL G  
Sbjct: 977  TDPLEQRDRLEAQSLKAAGGDPEAMEVDEAFLRALEDGMPPTGGLGLGVDRLIMLLTGR- 1035

Query: 555  NVREVSLFPMSQNFC 569
            ++REV  FP      
Sbjct: 1036 SIREVLSFPAHPGGQ 1050


>gi|68536277|ref|YP_250982.1| lysyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|68263876|emb|CAI37364.1| lysyl-tRNA synthetase [Corynebacterium jeikeium K411]
          Length = 1082

 Score =  120 bits (302), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 51/246 (20%), Positives = 101/246 (41%), Gaps = 28/246 (11%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R+SG +   R  G + F+D+RD  G  QV+   ++   E+A  +R+  +  +  +V +R 
Sbjct: 667 RVSGRIVAKREFGAVSFIDLRDASGKCQVLV--EAPKEELASRLRALDLGDLIAVVGTRG 724

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
                    TG+  L A+ IE+   A++L           E               ++  
Sbjct: 725 HS------RTGEPSLLAEAIEL--EAKDLHPLTRRGAGIGE---------------VNAR 761

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           +  R+ +  ++R  +    F+E  TPIL        AR F   S       Y L  AP+ 
Sbjct: 762 LRARSVVNAAIRRTLGDLGFMEVETPILQRVHGGANARPFKTRSNAANQDLY-LRIAPEL 820

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           Y + L+  G ++ +++   FR+E   +   P EF  ++   +  + + +    + +++  
Sbjct: 821 YLKRLLTQGAEKVYELGRVFRNEGVDATHNP-EFTTVEAYEAHGDYESMRWVAQRIIQAA 879

Query: 261 FEEFSN 266
              +  
Sbjct: 880 ATAYHG 885



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 63/195 (32%), Gaps = 28/195 (14%)

Query: 379  LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
            ++    ++I    + +       + G   +    + +    + + L  + C      +  
Sbjct: 912  ISEKVGQSITPETNFETLLELCAVHGIATQPGWDSGEVVQEMYEAL--VECTTTMPTFYT 969

Query: 439  DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            DFP             + +P T                  A ++DLV  G E+ +     
Sbjct: 970  DFP------------TSVSPLTRQHRS---------QPGVAERWDLVAWGVELGTAYSEL 1008

Query: 499  HMSEVMLQAFSNVGIS----KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
                          +                 RA + GMPP GG+  G+DR++MLL G  
Sbjct: 1009 TDPLEQRDRLEAQSLKAAGGDPEAMEVDEAFLRALEDGMPPTGGLGLGVDRLIMLLTGR- 1067

Query: 555  NVREVSLFPMSQNFC 569
            ++REV  FP      
Sbjct: 1068 SIREVLSFPAHPGGQ 1082


>gi|213621219|ref|ZP_03374002.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 136

 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 46/135 (34%), Positives = 61/135 (45%)

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
            +F  + + +A RRYG+DKPDLRNP+ + +V +     EF VF+   +   G        
Sbjct: 2   GDFPVMTFAEAERRYGSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRVAALRVP 61

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL 391
            G   +R   D    + +  G  GLAYI       G      PVAK L     EAI  R 
Sbjct: 62  GGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVAKFLTADIVEAILERT 121

Query: 392 DMQDGDSCFFIAGDP 406
             QDGD  FF A + 
Sbjct: 122 GAQDGDMIFFGADNK 136


>gi|213400767|gb|ACJ47032.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Dirofilaria
           immitis]
          Length = 168

 Score =  120 bits (302), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 70/172 (40%), Positives = 95/172 (55%), Gaps = 7/172 (4%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           GEFYQLD+EMSFV Q+DI   +E  L  VF +FS   +V  NF R+ Y +A+ +YG+DKP
Sbjct: 1   GEFYQLDLEMSFVTQEDIFQVIETTLYKVFTKFS-CKSVDKNFPRLTYKEAMLKYGSDKP 59

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA-RS 350
           DLRNP+ + +VTE F  S F +F   +           P K     R+F D+  E A + 
Sbjct: 60  DLRNPLSISDVTEVFRDSGFNIFKSNIQQGMVVRAIPAP-KTARKPRSFFDKKIEHAQKE 118

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            G  GL YI +  D+ G +   GP+AK  N      IR   +++ GDS FF 
Sbjct: 119 FGAKGLGYITF--DKDGTIK--GPIAKFFNDNKLNHIREVTNIKPGDSIFFA 166


>gi|169624345|ref|XP_001805578.1| hypothetical protein SNOG_15430 [Phaeosphaeria nodorum SN15]
 gi|111055975|gb|EAT77095.1| hypothetical protein SNOG_15430 [Phaeosphaeria nodorum SN15]
          Length = 489

 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 103/266 (38%), Gaps = 15/266 (5%)

Query: 10  GDLGVSDVGS-FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN-----PDSACFEIAK 63
            DL     G   V     VH +   G    + ++     T + AN       S+ ++ AK
Sbjct: 23  ADLQYEAHGQGTVTFDARVHSILVPGQPDEIKLQLRVSRTFLTANIQVTSVKSSEWKDAK 82

Query: 64  SVRSEWVLCIDGLVMSRSAETINAN----IITGQIELSAQKIEILSVAEELPLPVFGERE 119
            +  E ++C+ G            +     +T   EL    I ++++A    L    +R 
Sbjct: 83  EITRESLICVTGRFEPTKRHGHYMDSQDDTLTLSRELYVTGINVIALASPDILLPQQDRF 142

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                +   R +D+R           + +   +   + +  F    TP +  ++  G  +
Sbjct: 143 PSLEEQLNNRIIDVRHAASGVIFKLHSGMCQLIVEFLCSNGFYWIHTPRIITATIPGDNE 202

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQL 237
           +       + ++  L Q+ Q +KQ+ ++    R F+I P FR E     S R   EF  L
Sbjct: 203 YFHLPYFGRDAW--LSQSSQHHKQMALSMDMQRVFEIGPVFRAEVKSCESSRHLTEFTVL 260

Query: 238 DMEMSFV-EQDDILNTMENVLRGVFE 262
           D+ M F  +  +++  +E++L  VF 
Sbjct: 261 DVGMVFQNDYHEVMELIESMLVFVFR 286



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 2/97 (2%)

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN--VGISKEVVENRFGGLYRA 528
            N  +   +  +D +  G EI SG  R +    + +A S    G   +    ++     A
Sbjct: 387 ANPDVRGLSNTWDTIVRGREICSGSQRINSFNELCEAMSAGVCGPPLDPKAEKWQSYLTA 446

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           F+ GMP HGG   G++R++   LG  +VRE +LFP  
Sbjct: 447 FRTGMPRHGGCGLGVNRLLQGFLGLDDVREATLFPRD 483


>gi|67525231|ref|XP_660677.1| hypothetical protein AN3073.2 [Aspergillus nidulans FGSC A4]
 gi|40744468|gb|EAA63644.1| hypothetical protein AN3073.2 [Aspergillus nidulans FGSC A4]
          Length = 530

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 55/284 (19%), Positives = 104/284 (36%), Gaps = 41/284 (14%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           +   R  +C     S     +RL G+V  VR      F +I D   +  + A    A   
Sbjct: 34  LQSSRQETC-----SLEDQEIRLHGFVRSVRKQKRFAFAEISDGTAVEGIQAILKPA--- 85

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
            A  + +   + I G+  +       ++      EL A  + I         P+  +   
Sbjct: 86  QAAELSTGTAIEISGIWKACPPGKEQSH------ELQATSVNI-------TYPIQKKYHS 132

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI---AENFIECSTPILTASSPEGA 177
           PE +R     L  R          R+  +  +           F++   P++T+S  EGA
Sbjct: 133 PEFLRH-IPHLRFRTPLNALLARFRSECLYQLGNVFRGAPNGGFVQVHPPVITSSDCEGA 191

Query: 178 RDFLVP----------SRVNQGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDE 223
            +               +     F+  P+    + Q + +   A+     + ++P FR E
Sbjct: 192 GETFAVIPRETLIKGLPKEEHDHFFRAPKYLNVSSQLHLE-AYAAELGNVWTLSPMFRAE 250

Query: 224 DPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSN 266
              + R   EFY L+ E++F+ + D + +T+E +LR +     +
Sbjct: 251 KSDTPRHLSEFYMLEAEVNFLSDLDALTDTVEYLLRDLTRRLYD 294



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 37/161 (22%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
           +  ++ D+P                PF M     +S    +  ++    +DL+     E+
Sbjct: 383 QPIFVTDYP------------KVIKPFYMAPSHTQSNPKAEGETVAC--FDLLLPEVSEV 428

Query: 492 ASGGIRNHMSEVMLQAFSNV----------------------GISKEVVENRFGGLYRAF 529
           A G +R H    ++Q                            +      +         
Sbjct: 429 AGGSLREHRLPELIQNMREHNLIKTSPSNSEEEANQGEAPYPHLLPGEDLSHLQWYADLR 488

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           + G  PHGG   G DR +  L G +++R+   FP      D
Sbjct: 489 RWGSAPHGGFGLGFDRFLGYLTGVQSIRDTVAFPRYFGRAD 529


>gi|218264451|ref|ZP_03478292.1| hypothetical protein PRABACTJOHN_03988 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221995|gb|EEC94645.1| hypothetical protein PRABACTJOHN_03988 [Parabacteroides johnsonii
           DSM 18315]
          Length = 349

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 58/163 (35%), Gaps = 17/163 (10%)

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-- 187
            L  R +T       R  +  ++        F    TP++TAS  EGA      + +N  
Sbjct: 6   HLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPLITASDCEGAGQMFQVTTMNLY 65

Query: 188 ------------QGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
                          F+    +     Q +  L A+   + +   P FR E+  + R   
Sbjct: 66  DLKKDENGSIVYDNDFFGKQASLTVSGQLEGELAATALGQIYTFGPTFRAENSNTPRHLA 125

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           EF+ ++ E++F +  D +   E  ++   +   +       FL
Sbjct: 126 EFWMIEPEVAFNDILDNMQLAEEFIKYCVQWALDNCMDDIKFL 168



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 24/149 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  ++  +      + D+P     +E K        F M Q         D  +++A  
Sbjct: 224 HERFLVEEHFKRPVILTDYP-----KEIK-------AFYMKQNE-------DGKTVRAMD 264

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             L     EI  G  R    + +L   + +GI  + +           + G  PH G   
Sbjct: 265 V-LFPKIGEIIGGSEREADYDKLLNRINEMGIPMKDMW----WYLDTRRFGTVPHSGFGL 319

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           G +R+++ + G  N+R+V  FP +    D
Sbjct: 320 GFERLLLFVTGMTNIRDVIPFPRTPKNAD 348


>gi|213400779|gb|ACJ47038.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Cordylochernes
           scorpioides]
          Length = 168

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 70/172 (40%), Positives = 95/172 (55%), Gaps = 7/172 (4%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           GEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V   F RI Y +A+ +YG+DKP
Sbjct: 1   GEFYQLDLEMSFVTQEDIFQVIESTLYKVFTKFS-RKSVDKGFPRITYKEAMLKYGSDKP 59

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA-RS 350
           DLRNP+++ +VTE F  SEF +F   +           P K     R+F D+  E A + 
Sbjct: 60  DLRNPLLISDVTEIFRDSEFNIFKSNIERGMVVRAIPAP-KTAEEPRSFFDKKIEHAQKE 118

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            G  GL YI +      +    GP+AK LN      IR   +++ GDS FF 
Sbjct: 119 FGAKGLGYITF----DKDGTAKGPIAKFLNDNRLNHIREVTNIKPGDSVFFA 166


>gi|116193069|ref|XP_001222347.1| hypothetical protein CHGG_06252 [Chaetomium globosum CBS 148.51]
 gi|88182165|gb|EAQ89633.1| hypothetical protein CHGG_06252 [Chaetomium globosum CBS 148.51]
          Length = 551

 Score =  120 bits (301), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 69/392 (17%), Positives = 124/392 (31%), Gaps = 56/392 (14%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQ---VVANPDS-----ACFEIA 62
           LG   VG  ++L  W+   R  G  + F+++R+    +    V ANP+         +  
Sbjct: 97  LGDEHVGKSIKLRAWIQNARMQGAKMAFVELREEGNWSIQGVVAANPEGTPVSRQMVKWV 156

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++  E  + ++  V        +  +     EL   K  + + A  +          P 
Sbjct: 157 GAINPESFVVVEAKVQKPLEPVKSCRVSN--YELHITKCFVHAAAPTVLGMTLAAANRPV 214

Query: 123 S---------------------------------IRFKYRFLDLRRDTLHKNIVKRTRII 149
           +                                        +  R          R  + 
Sbjct: 215 ANFSDEEVPVEQEVEKLTIASAGEATGTPAASMLTHLDNIVMHKRSAVQQAIADIRGEMK 274

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
              R  + +  F E   P L A++ EG  +        + +F A  Q+PQ YKQ+ +A G
Sbjct: 275 ELYRSYLRSHGFKEFEPPCLIAAASEGGANVFRMPYFEKEAFLA--QSPQFYKQIEIAGG 332

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFSNGN 268
             R F + P FR E+  + R   EF  LDMEM   +   ++++ +E VL  +F       
Sbjct: 333 RKRVFSVGPVFRAENSNTPRHMTEFTGLDMEMEIKDDYREVVHVLEGVLFHIFRNIQERC 392

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
                 +R  Y            ++R  +      +         F  + + +       
Sbjct: 393 PEEIALVRSVYPSEEFLLPEPGKEVR--LTFAEGQKLLREEGPEEFRNV-TDDEDMSTPQ 449

Query: 329 IPAKGGGGNRAF------CDRMNEWARSQGQP 354
             A G    + +       D+  E AR     
Sbjct: 450 EKALGAIIRKKYNTDFYVLDKFPEGARPFYAK 481



 Score = 40.4 bits (93), Expect = 0.85,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 31/109 (28%), Gaps = 20/109 (18%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           + LG I    +      DF   +   E  +      PF   +                  
Sbjct: 451 KALGAIIRKKYN----TDFYVLDKFPEGAR------PFYAKED--------PTNRKVTNA 492

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV--VENRFGGLYRA 528
           YDL   G EI SGG R H    +       GI      ++  +     A
Sbjct: 493 YDLFMRGQEICSGGQRIHDPVELEARIRTKGIDPASPGIKEYWYWYCMA 541


>gi|229515672|ref|ZP_04405131.1| asparaginyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229347441|gb|EEO12401.1| asparaginyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 356

 Score =  120 bits (301), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 87/285 (30%), Gaps = 45/285 (15%)

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
            +  +      +   L  R + +      R  +  ++      + +   S P++TAS  E
Sbjct: 2   AKTRHSIEYLREVAHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAE 61

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQ-----------------LLMASGFDRYFQIAP 218
           GA +    S ++  +          Y Q                    A    + +   P
Sbjct: 62  GAGEMFRVSTLDMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAISKVYTFGP 121

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN------------ 266
            FR E+  + R   EF+ ++ E++F + + +    E++L+ VF+                
Sbjct: 122 TFRAENSNTSRHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAERRDDLEFFNDR 181

Query: 267 ---------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFS 315
                       V ++F ++ Y DAI            P+   +   +EH        F 
Sbjct: 182 INNEVIARLEQFVESDFAQVDYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHFK 241

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
             + V    +            R   D     A     PG+  I 
Sbjct: 242 APVIVKNYPKDI-----KAFYMRMNEDGKTVAAMDVLAPGIGEII 281



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 5/88 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D++  G  EI  G  R    +++       GI                + G  PH G   
Sbjct: 271 DVLAPGIGEIIGGSQREERLDILDARMREFGIDP----EHMDWYRDLRRYGTVPHAGFGL 326

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G +R+V  + G  NVR+V  FP +    
Sbjct: 327 GFERLVSYVTGMGNVRDVIPFPRTPRSA 354


>gi|213400757|gb|ACJ47027.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Nasonia
           longicornis]
          Length = 168

 Score =  120 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 68/172 (39%), Positives = 95/172 (55%), Gaps = 7/172 (4%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           GEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F RI Y +A+ +YG+DKP
Sbjct: 1   GEFYQLDLEMSFVTQEDIFQIIESTLYRVFAKFS-RKSVDKDFPRITYKEAMLKYGSDKP 59

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA-RS 350
           DLRNP+++ +VTE F  S F +F   +           P K     R+F D+  E A + 
Sbjct: 60  DLRNPLLISDVTEIFRDSGFNIFKSNIERGMVVRAIPAP-KTAEEPRSFFDKKIEHAQKE 118

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            G  GL YI +      +    GP+AK L+      IR   +++ GDS FF 
Sbjct: 119 FGAKGLGYITF----DKDGTAKGPIAKFLDENRLNHIREATNIEPGDSVFFA 166


>gi|213400775|gb|ACJ47036.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Zootermopsis
           angusticollis]
 gi|213400777|gb|ACJ47037.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Zootermopsis
           nevadensis]
          Length = 168

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 70/172 (40%), Positives = 96/172 (55%), Gaps = 7/172 (4%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           GEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F RI Y +A+ +YG+DKP
Sbjct: 1   GEFYQLDLEMSFVTQEDIFQIIESTLYKVFAKFS-RKSVDKDFPRITYKEAMLKYGSDKP 59

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA-RS 350
           DLRNP+++ +VTE F  SEF +F   +           P K     R+F D+  E A + 
Sbjct: 60  DLRNPLLISDVTEIFRDSEFNIFKSNIERGMVVRAIPAP-KTAEEPRSFFDKKIEHAQKE 118

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            G  GL YI +      +    GP+AK LN      IR   +++ GDS FF 
Sbjct: 119 FGAKGLGYITF----DKDGTAKGPIAKFLNDNRLNHIREVTNVKPGDSVFFA 166


>gi|170090366|ref|XP_001876405.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647898|gb|EDR12141.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 464

 Score =  120 bits (300), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 77/247 (31%), Gaps = 37/247 (14%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           S   +SGW+  +R    + F  + D      + A                      G  +
Sbjct: 2   STTTVSGWIKSIRKQKNVSFAVLTDGSSYKGLQAVFLKGN---------GSDRLTTGTAV 52

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
             + + +++       EL   + +     E    P+       E +R     L  R   +
Sbjct: 53  RLTGKLVSSPGAGQSHELLVDEAQ---DGEVEAYPIQKHALANEYLR-DNAHLRARTSHI 108

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----------- 187
              +  R  +   M     A+ F    TPILT +  EGA +    S V            
Sbjct: 109 AAMVRLRDSLARQMNAFFAAQGFCYVHTPILTGNDAEGAGEAFRISPVEGVHPASITPPS 168

Query: 188 ----------QGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
                        F+   A      Q     +A+   R + ++PCFR E   + R   EF
Sbjct: 169 SPPPETSLQPPPEFFSRPAYLTVSHQLHLEALATALSRVYTLSPCFRAERSLTSRHLAEF 228

Query: 235 YQLDMEM 241
           + L+ E 
Sbjct: 229 WMLEAEW 235



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 19/132 (14%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             ++ D+P             +  PF M           +  ++    +DL+  G  E+ 
Sbjct: 350 PVFVTDYP------------ASLKPFYMRANDTREPGQGEEDTVAC--FDLLVPGVGELV 395

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G +R   ++V+ +     G+ +      +       + G  PH G   G +R+V  + G
Sbjct: 396 GGSVREDRADVLKRKMEEAGLGR----EAYKWYEELRRYGGAPHAGFGMGFERLVGWVGG 451

Query: 553 AKNVREVSLFPM 564
             NVRE    P 
Sbjct: 452 VDNVRECIPMPR 463


>gi|1483209|emb|CAB01404.1| aspartyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 68

 Score =  120 bits (300), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 30/64 (46%), Positives = 42/64 (65%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLREL 587
           AF+ G PPHGGIA G DR+ MLLLG  ++R+   FP  ++    L  +PS V  +QLREL
Sbjct: 1   AFKYGTPPHGGIAYGFDRLCMLLLGLDSIRDTIAFPKVKDSSCPLTDAPSEVEPKQLREL 60

Query: 588 GLRI 591
            +++
Sbjct: 61  HIKV 64


>gi|270602102|ref|ZP_06221568.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270318244|gb|EFA29437.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 142

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 3/139 (2%)

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA 193
            +   +  + R++++  +R   I++ F+E  TP+L        AR F+          Y 
Sbjct: 3   NEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMY- 61

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  AP+ Y + L+  GF+R F++   FR+E   S R   EF  L+   ++ +  D+++  
Sbjct: 62  LRIAPELYLKRLVVGGFERVFELNRNFRNEGV-SVRHNPEFTMLEYYQAYADYHDLMDNT 120

Query: 254 ENVLRGVFEEFSNGNTVSN 272
           E +LR +  +      V  
Sbjct: 121 EELLRKLAIDILGTTIVKY 139


>gi|62822481|gb|AAY15029.1| unknown [Homo sapiens]
          Length = 313

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 28/238 (11%)

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
             T       ++ I +  R  +I + F+E  TP + +++ EG  +    S     ++ A 
Sbjct: 1   TSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAASEGGANVFTVSYFKNNAYLA- 59

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-----DDI 249
            Q+PQ YKQ+ + + F++ F I P FR ED  + R   EF  LD+EM+F        ++I
Sbjct: 60  -QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVMEEI 118

Query: 250 LNTMENVLRGVFEEFS------NGNTVSNNF------LRICYDDAIRRY------GTDKP 291
            +TM  + +G+ E F       N       F      LR+ Y +A+           D+ 
Sbjct: 119 ADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLREAGVEMGDED 178

Query: 292 DLRNPII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           DL  P    + ++ +    ++F +  K  L+V P Y +          +     R  E
Sbjct: 179 DLSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEE 236



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 157 RLEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYD----TDFYILD------KY 206

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 207 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 257

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 258 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 313


>gi|213400761|gb|ACJ47029.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Armadillidium
           vulgare]
          Length = 168

 Score =  119 bits (299), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 70/172 (40%), Positives = 97/172 (56%), Gaps = 7/172 (4%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           GEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F R+ Y DA+ +YG+DKP
Sbjct: 1   GEFYQLDLEMSFVTQEDIFQVIESTLYKVFAKFS-RKSVDKDFPRVTYKDAMLKYGSDKP 59

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARS- 350
           DLRNP+++ +VTE F  SEF +F   +           P K     R+F D+  E A+  
Sbjct: 60  DLRNPLLISDVTEIFRDSEFNIFKSNIERGMVVRAIPAP-KTAEEPRSFFDKKIEHAKKE 118

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            G  GL YI +  D        GP+AK LN     +I+   +++ GDS FF 
Sbjct: 119 FGAKGLGYITFDKDGIAK----GPIAKFLNDNRLNSIKEITNIEPGDSVFFA 166


>gi|119616029|gb|EAW95623.1| lysyl-tRNA synthetase, isoform CRA_e [Homo sapiens]
          Length = 583

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 94/286 (32%), Gaps = 57/286 (19%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R  G  +IF D+R      QV+AN  S  ++  +           G ++  
Sbjct: 155 KVAGRIHAKRASGGKLIFYDLRGEGVKLQVMAN--SRNYKSEEEFIHINNKLRRGDIIGV 212

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +   +I +LS    +   +    +                     
Sbjct: 213 QGNP--GKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKD-------------------- 250

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQ 199
                                 +  TP++        A+ F+        + Y +  AP+
Sbjct: 251 ----------------------KIETPMMNIIPGGAVAKPFITYHNELDMNLY-MRIAPE 287

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y ++L+  G DR ++I   FR+E       P EF   +  M++ +  D++   E ++ G
Sbjct: 288 LYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYHDLMEITEKMVSG 346

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           + +  +          ++ Y            D   P    N+ E 
Sbjct: 347 MVKHITGSY-------KVTYHPDGPEGQAYDVDFTPPFRRINMVEE 385



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 465 KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 524

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP  G   GIDR+ M L  + N++EV LFP  +
Sbjct: 525 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMK 560


>gi|237845635|ref|XP_002372115.1| OB-fold nucleic acid binding domain-containing protein [Toxoplasma
           gondii ME49]
 gi|211969779|gb|EEB04975.1| OB-fold nucleic acid binding domain-containing protein [Toxoplasma
           gondii ME49]
          Length = 309

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/208 (21%), Positives = 73/208 (35%), Gaps = 8/208 (3%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
                 V + GW+HR+R  G  ++F  +RD  G  QV+          A +V +E  + I
Sbjct: 108 KHRNERVCIKGWIHRMRRQGKSLMFFILRDGTGFLQVLLMDKLCQTYDALTVNTECTVEI 167

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G +                 EL A   +I+  A    +      E         R L +
Sbjct: 168 YGAIKEVPEG----KEAPNGHELIADFWKIIGNAPSGGIDNVLNEEASVDKMLDNRHLVI 223

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +     +  R     +MR       ++E + P L  +  EG           + SF  
Sbjct: 224 RGENAAALLRLRAAATRAMREHFYNAGYVEVAPPTLVQTQVEGGSTLFNLDYFGEQSF-- 281

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFR 221
           L Q+ Q Y +  + +     F IA  +R
Sbjct: 282 LTQSSQLYLETCIPT-LGDVFCIAQSYR 308


>gi|71033395|ref|XP_766339.1| asparaginyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68353296|gb|EAN34056.1| asparaginyl-tRNA synthetase, putative [Theileria parva]
          Length = 558

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 93/257 (36%), Gaps = 16/257 (6%)

Query: 20  FVRLSGWVHRVR--PHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGL 76
            V   G+V  +R      + F+DI D   +  +    +    F+  +S+++   L   G 
Sbjct: 117 TVNTRGFVQEIRRINSQNLYFIDINDGSTLANLQIVVNQANNFKELESLKNGDHLYAVGT 176

Query: 77  VMSRSAETINANIITGQIELSA----QKIEILSVAEEL-PLPVFGEREYPESIRFKYRFL 131
           +  R       ++    + ++      K++I   +E+    PV    EY +    KY   
Sbjct: 177 MDRRRGVPSERSLSDFDLYINHNNPEHKLKIHKYSEDDLENPVIPNIEYSDEYLRKYTHF 236

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
             R       I  R+ I + +     +  F E  TP LT  + E              + 
Sbjct: 237 RFRNKQFRSIIAIRSAIKSYIHQFFTSNKFTEVDTPCLTLMNCENLAPLT--------NI 288

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
                +  Q +      G  + +++ P FR E   + R   EF+ ++ E+       ++N
Sbjct: 289 PVNLSSTGQMELEFACYGLGKVWKVGPSFRGERSDTIRHANEFWMIEAEIPDATLTGMIN 348

Query: 252 TMENVLRGVFEEFSNGN 268
            ++ ++RG        +
Sbjct: 349 LIQELIRGCATYILQNH 365



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 6/111 (5%)

Query: 458 PFTMPQG-GMESLKGNDLLSIKAFQYD-LVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           PF M    G +    +  L      +D L   G+EIA G IR H  EV+ +  +   IS 
Sbjct: 451 PFYMKSSSGTDKSVESGNLKNTVENFDILAPFGYEIAGGSIREHEYEVLKRKVNERKISG 510

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           E  E ++  L +       PHGG   G DR+VML+   +N+R+V+ FP+++
Sbjct: 511 EDYE-KYLNLRKNVYL---PHGGFGIGFDRLVMLMTMKENIRDVTPFPVTK 557


>gi|149637054|ref|XP_001510544.1| PREDICTED: similar to Aspartyl-tRNA synthetase [Ornithorhynchus
           anatinus]
          Length = 329

 Score =  119 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 5/162 (3%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R  T       ++ I +  R  +  + F+E  TP + +++ EG  +    S     ++ A
Sbjct: 14  RTSTSQAVFRLQSGICHLFRETLTHKGFVEIQTPKIISAASEGGANVFTVSYFKSSAYLA 73

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNT 252
             Q+PQ YKQ+ + + F++ F I P FR ED  + R   EF  LD+EM+F     ++++ 
Sbjct: 74  --QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVVDE 131

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLR 294
           + + L  +F+              +        +   +P LR
Sbjct: 132 IADTLVQIFKGL--QERFQTEIQTVSKQFPCEPFKFLEPTLR 171



 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 47/196 (23%), Positives = 72/196 (36%), Gaps = 31/196 (15%)

Query: 377 KHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
           K L        R  L +  G        + L   +          + LG +    ++   
Sbjct: 164 KFLEPTLRLEYREALALLRGAGVEMGDEEDLSTPNE---------KLLGRLVKEKYD--- 211

Query: 437 IMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
             DF   +      K   A  PF TMP  G            ++  YD+   G EI SG 
Sbjct: 212 -TDFYILD------KYPLAVRPFYTMPDPGNPK---------QSNSYDMFMRGEEILSGA 255

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            R H  +++ +   + GI   +   +      +F+ G PPH G   G++R+ ML LG  N
Sbjct: 256 QRIHDPQLLTERAQHHGIGNYL--EKIKAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHN 313

Query: 556 VREVSLFPMSQNFCDL 571
           VR+ S+FP        
Sbjct: 314 VRQTSMFPRDPKRLTP 329


>gi|218199619|gb|EEC82046.1| hypothetical protein OsI_26023 [Oryza sativa Indica Group]
          Length = 377

 Score =  119 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 85/261 (32%), Gaps = 50/261 (19%)

Query: 103 ILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFI 162
           ++  ++    P+  +R   E +R     L  R +T       R  +  +         F+
Sbjct: 1   MIGESDPTSFPIQKKRASREFLR-TVAHLRPRTNTFGAVARVRNALAYATHKFFQDNGFV 59

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQG-----------------------SFYALP---Q 196
             ++PI+TAS  EGA +    + +                           F+  P    
Sbjct: 60  WVASPIITASDCEGAGEQFYVTTLISNSAEGGSLVKDIPSTKDGRVDWSQDFFCKPAFLT 119

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
              Q      A+     +   P FR E+  + R   EF+ ++ E++F + +D +    + 
Sbjct: 120 VSGQLNGETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACASSY 179

Query: 257 LRGVFEEFSN---------------------GNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           L+ V +                          + V  NF+ + Y DAI      K     
Sbjct: 180 LQYVVKYVLENCKEDMDFFNTWIEKGIIDRLNDVVEKNFVHLSYSDAIELLVGSKKKFEF 239

Query: 296 PII--MHNVTEHFVHSEFRVF 314
           P+   +   +EH  +     F
Sbjct: 240 PVKWGLDLQSEHERYITEVAF 260



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 4/102 (3%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    LV    E+  G  R    + +      + ++K    + +      
Sbjct: 279 MRENDDGKTVAAMDLLVPRVGELIGGSQREERLDYLEARLDELNLNK----DSYWWYLDL 334

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            + G  PH G   G +R+V    G  N+R+   FP      +
Sbjct: 335 RRYGSVPHAGFGLGFERLVQFATGMDNIRDTIPFPRVPGSAE 376


>gi|296815160|ref|XP_002847917.1| asparaginyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238840942|gb|EEQ30604.1| asparaginyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 540

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/271 (19%), Positives = 98/271 (36%), Gaps = 28/271 (10%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           S     VR+ G +  +R      F  I D   +  + A       E A ++     + I 
Sbjct: 62  SLDNKEVRVQGHIRFLRKQKRFAFAQISDGTSLQPIQA---VLTPEQATNLTQGAAVEIS 118

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G+        + ++      EL   K++IL  A+    P+  +   P+ +R     L LR
Sbjct: 119 GIWQPTPPGKLQSH------ELQTTKVKILGEADPATYPIQKKFHTPDFLRQL-PHLRLR 171

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAE---NFIECSTPILTASSPEGARDFLVPSRVNQ--- 188
                     R+  I  +     +    NF++   P++T+S  EGA +       +    
Sbjct: 172 TPFNSLLSRLRSEFIYQLTEEFRSHRNQNFVQVQPPLITSSDCEGAGEVFSLKPRDAITE 231

Query: 189 ----GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                 F+  P+      QL + +        A     E   + R   EFY L++EMS++
Sbjct: 232 EGKVIEFFRSPKYLTVSSQLHLEA-------YARGVGAEKSDTPRHLSEFYMLEVEMSYL 284

Query: 245 EQ-DDILNTMENVLRGVFEEFSNGNTVSNNF 274
           +  + + + +E ++R +             F
Sbjct: 285 DSLEPLTSFVETLIRNITRRVYQTPVAQELF 315



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 41/178 (23%)

Query: 418 NHIAQELGIINC-NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
             +  E  +++        ++ D+P             A  PF M   G    +  + ++
Sbjct: 378 LQLEHEKFLVDTIGKGLPIFVTDYP------------KAVKPFYMLPSGEPPNENGETVA 425

Query: 477 IKAFQYDLVCNG-FEIASGGIRNHMSEVMLQAFSNVGISK-----------EVVENRFGG 524
                +DL+     E+  G +R H    ++Q     G+ K              +  +  
Sbjct: 426 C----FDLLLPEICEVVGGSLREHRLSPLIQNMREHGLLKLRNSTPDPTFAVDAKAPYPY 481

Query: 525 LY------------RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           L                + G  PHGG   G DR +  L G  ++R++  FP      D
Sbjct: 482 LLANEELGSIQWYADLRRWGTVPHGGFGLGFDRFIGYLAGVSSLRDLVPFPRHFGRAD 539


>gi|50293427|ref|XP_449125.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528438|emb|CAG62095.1| unnamed protein product [Candida glabrata]
          Length = 467

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 101/247 (40%), Gaps = 18/247 (7%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE-IAKSVRSEWVLCIDGLVMSRS 81
           ++GWV  VR    + F+D+ D      V     +     + + +++   + +D  ++   
Sbjct: 29  VNGWVRSVRLMKKVAFVDLYDGSSNKDVKIVIKNPQESSLVRHLKTGQCISVDSPLLKI- 87

Query: 82  AETINANIITGQ--IELSAQKIEILSVAEELPLPVFGEREYPESIR----FKYRFLDLRR 135
             T  + I   +  +E S + +++L   E    P+  +    E +R     K+R L    
Sbjct: 88  --TQGSRIQPFELLVEDSVKDLKLLGDVETNY-PLQKKSHSLEFLRTLPTLKHRSL---- 140

Query: 136 DTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
                 +  R+ +          + NF++ S PI T +  EGA +          +  A 
Sbjct: 141 -FYGSILRFRSHMEEYAINFFNKQENFLKVSPPIFTTNDCEGAGEQFEVKSSVLENKKAF 199

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTM 253
                Q    +++      + ++PCFR E   + R   EF+ L+ EMSF++  D +L+  
Sbjct: 200 LTVSTQLHLEILSMAIANCWTLSPCFRAEKSATPRHLMEFWMLEAEMSFIDNLDQLLDFT 259

Query: 254 ENVLRGV 260
            N L+ +
Sbjct: 260 RNFLQSM 266



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 48/150 (32%), Gaps = 27/150 (18%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +         ++ D+P                 F M                 A  
Sbjct: 340 HEKWLAEKYFQSPVFVTDYPM------------DCKAFYMKSNED--------GKTVAC- 378

Query: 482 YDL-VCNGFEIASGGIRNHMSE-VMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +DL V    EI  G +R    E +  Q       +   ++          + G+ PHGG 
Sbjct: 379 FDLLVPEMGEIIGGSMREDNYESLQYQIKKRGMNNTGELD----WYVNLRKQGVAPHGGF 434

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G +R +  LLG +N+++   FP S +  
Sbjct: 435 GLGFERFISYLLGIQNIKDTIPFPRSASSS 464


>gi|259149288|emb|CAY82530.1| Msk1p [Saccharomyces cerevisiae EC1118]
          Length = 576

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 101/256 (39%), Gaps = 17/256 (6%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYG--------ITQVVANPDSACFEIAKSVRSEWVLC 72
            ++G +  +R  G  I+F+D+ +              V  N      E   +        
Sbjct: 102 SINGRIKSIRFSGQKIVFIDLYNGSSGLKNDTQLQLIVNYNKIGGSSEDKANFSEYMNFL 161

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +        +      + L   K+ I+    +LPLP    R   E+     R +D
Sbjct: 162 KKGDYIKALGYPGFSQSRVKMLSLICNKLPIVLSVSQLPLPS---RLNDETKIKSNRVVD 218

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF 191
            + +     ++ R RII  +R  +   NF+E  TPIL+  S+   A+ F+  S+      
Sbjct: 219 YQLNGTQ-TLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDH 275

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  AP+ + + L+ SG  + ++I   FR+E   S     EF  L+   +++  DDI+ 
Sbjct: 276 LELRIAPELWLKRLIISGLQKVYEIGKVFRNEGIDSTHN-AEFSTLEFYETYMSMDDIVA 334

Query: 252 TMENVLRGVFEEFSNG 267
             E++ + +       
Sbjct: 335 RTEDLFKFLITNLQKF 350



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 9/104 (8%)

Query: 468 SLKGNDLL-SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG-- 524
            L   D        ++++   G E  +     +  ++ LQ F       E+  N+     
Sbjct: 464 PLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQLQKFLQQKQINELTGNKTETLS 523

Query: 525 ------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                      + GMPP GG   GIDR+ ML    K + EV  F
Sbjct: 524 PVIDYQYVETMKYGMPPVGGFGLGIDRLCMLFCDKKRIEEVLPF 567


>gi|213400773|gb|ACJ47035.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Coptotermes
           acinaciformis]
          Length = 168

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 68/172 (39%), Positives = 95/172 (55%), Gaps = 7/172 (4%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           GEFYQLD+EMSFV Q+DI + +E+ L  VF +FS   +V  +F RI Y +A+ +YG+DKP
Sbjct: 1   GEFYQLDLEMSFVTQEDIFDIIESALYKVFAKFS-RKSVDKDFPRITYKEAMLKYGSDKP 59

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA-RS 350
           DLRNP+++ +VTE F  S F +F   +           P K     R+F D+  E A + 
Sbjct: 60  DLRNPLLISDVTEIFRDSGFNIFKSNIERGMVVRAIPAP-KTVEEPRSFFDKRIEHAQKE 118

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            G  GL YI +      +    GP+AK L+      IR   + + GDS FF 
Sbjct: 119 FGAKGLGYITF----DKDGTAKGPIAKFLDDDRLNRIREITNTEPGDSVFFA 166


>gi|240279712|gb|EER43217.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 949

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 61/365 (16%), Positives = 124/365 (33%), Gaps = 48/365 (13%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDH-YGITQVVANP----DSACFEIAKSV 65
           +    +G  V     VH +R     ++F+  R     +  V+A       +   +  + +
Sbjct: 156 ITPHSIGQEVTFRARVHHIRNMSSKLVFVIFRQQVTTMQGVLAEKPGVISTLMVQWVERI 215

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP--------VFGE 117
           R   ++ + G++ S         I    +EL  Q++ ++   E+                
Sbjct: 216 RVGSIVKVRGVLSSSKVPVTGCTIH--DVELDIQELHVVVHREDPIPFSVYEAELLNKDA 273

Query: 118 REYP-------ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
           +          +  R   R LDLR DT       ++ I N  R  + A+ FIE  TP L 
Sbjct: 274 KNTDGRRNHVLDRTRLSNRILDLRTDTSQSIFRIQSAISNLFRAALDAQGFIEIHTPKLQ 333

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           +S+ E            + +F A  Q+PQ  KQ+ +A+  +R   I              
Sbjct: 334 SSATESGASVFEVKYFTREAFLA--QSPQLAKQIEIAADLERVSDIG------------- 378

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDK 290
                 + +E       + L T+++VL+ +F+          + ++  +      +  + 
Sbjct: 379 -----AMAIEE---HYHEALETIDSVLKEIFKGIYGRYRREVDIIKGQFPHEDLVWLDET 430

Query: 291 P--DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           P       I + N +      E    ++ L       +  +  +    +    D+  + A
Sbjct: 431 PIIPFAEGIKLLNDSGWRQDGEELSVNEDLGTRDEIRLGELIKEKYHTDYYILDKFPKSA 490

Query: 349 RSQGQ 353
           R    
Sbjct: 491 RPFYA 495



 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/179 (24%), Positives = 67/179 (37%), Gaps = 29/179 (16%)

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELG-IINCNCFEFCWIMD-FPFYEWNEEEKKID 453
            DS +   G+ L         R+ I   LG +I        +I+D FP            
Sbjct: 443 NDSGWRQDGEELSVNEDLG-TRDEI--RLGELIKEKYHTDYYILDKFP-----------K 488

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
            A   + M          +         +D+   G EI SGG R H  +++ Q     GI
Sbjct: 489 SARPFYAMEDPENPDFTNS---------FDIFVRGQEIVSGGQRIHDEKILEQRMKEAGI 539

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
           +   +E         F+ G PPH G   G++R++ML+L   N+R  SLF         +
Sbjct: 540 NPLAMEE----YLEGFRWGAPPHAGAGIGLERLLMLILKLGNIRLASLFHRDPKSFQDM 594


>gi|190409062|gb|EDV12327.1| lysine-tRNA ligase [Saccharomyces cerevisiae RM11-1a]
 gi|207341689|gb|EDZ69675.1| YNL073Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 576

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 101/256 (39%), Gaps = 17/256 (6%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYG--------ITQVVANPDSACFEIAKSVRSEWVLC 72
            ++G +  +R  G  I+F+D+ +              V  N      E   +        
Sbjct: 102 SINGRIKSIRFSGQKIVFIDLYNGSSGLKNDTQLQLIVNYNKIGGSSEDKANFSEYMNFL 161

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +        +      + L   K+ I+    +LPLP    R   E+     R +D
Sbjct: 162 KKGDYIKALGYPGFSQSRVKMLSLICNKLPIVLSVSQLPLPS---RLNDETKIKSNRVVD 218

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF 191
            + +     ++ R RII  +R  +   NF+E  TPIL+  S+   A+ F+  S+      
Sbjct: 219 YQLNGTQ-TLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDH 275

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  AP+ + + L+ SG  + ++I   FR+E   S     EF  L+   +++  DDI+ 
Sbjct: 276 LELRIAPELWLKRLIISGLQKVYEIGKVFRNEGIDSTHN-AEFSTLEFYETYMSMDDIVT 334

Query: 252 TMENVLRGVFEEFSNG 267
             E++ + +       
Sbjct: 335 RTEDLFKFLITNLQKF 350



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 9/104 (8%)

Query: 468 SLKGNDLL-SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG-- 524
            L   D        ++++   G E  +     +  ++ LQ F       E+  N+     
Sbjct: 464 PLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQLQKFLQQKQINELTGNKTETLS 523

Query: 525 ------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                      + GMPP GG   GIDR+ ML    K + EV  F
Sbjct: 524 PVIDYQYVETMKYGMPPVGGFGLGIDRLCMLFCDKKRIEEVLPF 567


>gi|6324256|ref|NP_014326.1| Msk1p [Saccharomyces cerevisiae S288c]
 gi|1351160|sp|P32048|SYKM_YEAST RecName: Full=Lysyl-tRNA synthetase, mitochondrial; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS; Flags: Precursor
 gi|791113|emb|CAA60187.1| lysine--tRNA ligase [Saccharomyces cerevisiae]
 gi|1301959|emb|CAA95947.1| MSK1 [Saccharomyces cerevisiae]
 gi|285814578|tpg|DAA10472.1| TPA: Msk1p [Saccharomyces cerevisiae S288c]
          Length = 576

 Score =  118 bits (296), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 101/256 (39%), Gaps = 17/256 (6%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYG--------ITQVVANPDSACFEIAKSVRSEWVLC 72
            ++G +  +R  G  I+F+D+ +              V  N      E   +        
Sbjct: 102 SINGRIKSIRFSGQKIVFIDLYNGSSGLKNDTQLQLIVNYNKIGGSSEDKANFSEYMNFL 161

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +        +      + L   K+ I+    +LPLP    R   E+     R +D
Sbjct: 162 KKGDYIKALGYPGFSQSRVKMLSLICNKLPIVLSVSQLPLPS---RLNDETKIKSNRVVD 218

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF 191
            + +     ++ R RII  +R  +   NF+E  TPIL+  S+   A+ F+  S+      
Sbjct: 219 YQLNGTQ-TLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDH 275

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  AP+ + + L+ SG  + ++I   FR+E   S     EF  L+   +++  DDI+ 
Sbjct: 276 LELRIAPELWLKRLIISGLQKVYEIGKVFRNEGIDSTHN-AEFSTLEFYETYMSMDDIVT 334

Query: 252 TMENVLRGVFEEFSNG 267
             E++ + +       
Sbjct: 335 RTEDLFKFLITNLQKF 350



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 9/104 (8%)

Query: 468 SLKGNDLL-SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG-- 524
            L   D        ++++   G E  +     +  ++ LQ F       E+  N+     
Sbjct: 464 PLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQLQKFLQQKQINELTGNKTETLS 523

Query: 525 ------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                      + GMPP GG   GIDR+ ML    K + EV  F
Sbjct: 524 PVIDYQYVETMKYGMPPVGGFGLGIDRLCMLFCDKKRIEEVLPF 567


>gi|70925537|ref|XP_735446.1| lysine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56509114|emb|CAH78729.1| lysine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 214

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 96/215 (44%), Gaps = 6/215 (2%)

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           N  +   +  K+        I  +    + +      + G++ L  + I IL+ A  LPL
Sbjct: 3   NAHNEELDEYKNTHEISARKIIEVGDFVAVKGYIRKSLRGELTLHTKNIYILTKAL-LPL 61

Query: 113 PVFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
           P   +       +++ R+LD L  +   + I+ R  I   +R  ++ + ++E  TP+L  
Sbjct: 62  PDKYKGMKDIEYKYRKRYLDFLTNNEQKEKIITRFNITQEIRRFLLKKKYLEVDTPMLQL 121

Query: 172 SSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDR 229
                 A+ F    +      Y L  AP+ + + L+ SG  ++ F+++ CFR+E   +  
Sbjct: 122 LPGGALAKPFETYLKSLDLVLY-LRIAPELFLKKLIISGISEKIFELSKCFRNEGLSTIH 180

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
            P EF  L++  ++     ++   + +++ V ++F
Sbjct: 181 NP-EFTILEIYKAYANYKYMMKFTKTLIKNVTKKF 214


>gi|169806401|ref|XP_001827945.1| asparaginyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|263511651|sp|A9CTP8|SYNC_ENTBH RecName: Full=Probable asparaginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|161779013|gb|EDQ31040.1| asparaginyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 458

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 63/364 (17%), Positives = 126/364 (34%), Gaps = 39/364 (10%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
           + YR     D+  S +   +   GWV   R    I F+++   + I + V          
Sbjct: 30  NTYRYIRLFDIDDSLMNQKICFFGWVKSSRSSSKISFIELISQFKIIKCVIPTKV----- 84

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
              +     L + G++   +    +      Q E+  Q  E+    +    P+       
Sbjct: 85  --KLTDHTTLKVWGIMKPNNGNDEH------QFEIDVQAYEVYGGYQAPSFPL--NIHSD 134

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           +        L LR       +  +  ++ ++R      N+ E + P L  +  EG     
Sbjct: 135 KDTLLDLAHLGLRMPHRILFLQAQNELLKALRKFYWNNNYTEITPPTLVQTQVEGGATLF 194

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
             +  +Q ++  L Q+ Q Y +  +A    + F I P +R E  ++ R   EF  ++ E+
Sbjct: 195 KLNYYDQPAY--LTQSSQLYLE-TVAPVVGKAFCIMPSYRAEKSKTSRHLSEFTHVEAEL 251

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIR-- 284
             ++ D++++ +E ++R    EF                        F +I Y+DAI   
Sbjct: 252 VDIQFDELMDQIEQLIRSTINEFYKNILPEIKKIDNDFQPVVLSDKQFKKITYEDAIHFL 311

Query: 285 ----RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
                  TD  D +    + + +E F+   +     I  +    +               
Sbjct: 312 IAQNHKKTDNTDYQLGDDISDASEKFLLETYGENQPIFLIRFPTDHKPFYVAKDQYGTQT 371

Query: 341 CDRM 344
           CD +
Sbjct: 372 CDLL 375



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 16/122 (13%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
           +    H PF + +                   DL+  G  EI  G +R      +L  F 
Sbjct: 352 RFPTDHKPFYVAKD-----------QYGTQTCDLLFPGIGEIVGGSMRETNYNNLLDGFK 400

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
              I        +       + G  PHGG   G +R++M L+  K+V + +L+    + C
Sbjct: 401 RENID----HEPYSWYLDMAKFGPSPHGGYGLGFERLLMCLMKYKSVDQSTLYCRKPSRC 456

Query: 570 DL 571
             
Sbjct: 457 TP 458


>gi|323331966|gb|EGA73378.1| Msk1p [Saccharomyces cerevisiae AWRI796]
          Length = 537

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 101/256 (39%), Gaps = 17/256 (6%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYG--------ITQVVANPDSACFEIAKSVRSEWVLC 72
            ++G +  +R  G  I+F+D+ +              V  N      E   +        
Sbjct: 63  SINGRIKSIRFSGQKIVFIDLYNGSSGLKNDTQLQLIVNYNKIGGSSEDKANFSEYMNFL 122

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +        +      + L   K+ I+    +LPLP    R   E+     R +D
Sbjct: 123 KKGDYIKALGYPGFSQSRVKMLSLICNKLPIVLSVSQLPLPS---RLNDETKIKSNRVVD 179

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF 191
            + +     ++ R RII  +R  +   NF+E  TPIL+  S+   A+ F+  S+      
Sbjct: 180 YQLNGTQ-TLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDH 236

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  AP+ + + L+ SG  + ++I   FR+E   S     EF  L+   +++  DDI+ 
Sbjct: 237 LELRIAPELWLKRLIISGLQKVYEIGKVFRNEGIDSTHN-AEFSTLEFYETYMSMDDIVT 295

Query: 252 TMENVLRGVFEEFSNG 267
             E++ + +       
Sbjct: 296 RTEDLFKFLITNLQKF 311



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 9/104 (8%)

Query: 468 SLKGNDLL-SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG-- 524
            L   D        ++++   G E  +     +  ++ LQ F       E+  N+     
Sbjct: 425 PLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQLQKFLQQKQINELTGNKTETLS 484

Query: 525 ------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                      + GMPP GG   GIDR+ ML    K + EV  F
Sbjct: 485 PVIDYQYVETMKYGMPPVGGFGLGIDRLCMLFCDKKRIEEVLPF 528


>gi|320585965|gb|EFW98644.1| lysyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 617

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 61/267 (22%), Positives = 107/267 (40%), Gaps = 27/267 (10%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDS--ACFEIAK---- 63
           + G +     V LSG V  V+  G  ++FL + D     QV+ N        + AK    
Sbjct: 128 EDGEAAESRRVELSGRVMSVQRLGAKLVFLKLLDEGEQVQVMCNLRQLADGEDEAKGSSQ 187

Query: 64  -----SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGE 117
                + ++   L   G  ++ +         TG++ L+A ++  +LS            
Sbjct: 188 AVTPAAFKTAARLLQRGDHIAVTGRA--TRTATGELTLAADRLPRVLSPGLAPLPT---- 241

Query: 118 REYPESIRFKYRFLDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
           R      R + R +DL    D     +  R R++  +R  + A  F+E  TPIL   +  
Sbjct: 242 RLLDGDTRAQRRHMDLLVNVDGAAAALRLRARLLRVLRRFLEAARFVEVQTPILAPLAGG 301

Query: 176 G-ARDFLVPSRVNQGSF----YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
             AR F+        +      +L  AP+ + + L+  G DR F+I PCFR+E   +   
Sbjct: 302 AVARPFVTGMTTAGTAAGAAALSLRIAPELWLKRLVVGGLDRVFEIGPCFRNEGIDTTHN 361

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVL 257
           P EF   +   ++     ++   E ++
Sbjct: 362 P-EFTMCEFYAAYWTLPRLIAETERLM 387



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 46/120 (38%), Gaps = 4/120 (3%)

Query: 446 NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML 505
            + +  +   H+P  M      SL         A + +L  +G E+A+     +      
Sbjct: 487 ADRDGPLFITHHPACMSPLAK-SLVCPLTGQRVAARAELFVDGRELANMYEEENDPAEQR 545

Query: 506 QAFSNVGISKEVVENRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +      I+ +   +          A + G+PP GG   G++R+VML  G + + +   F
Sbjct: 546 RKMEQQLIAHDQDHDAMAVDENYIAALESGLPPTGGWGCGVERLVMLFSGQRRIADCLSF 605


>gi|323335817|gb|EGA77096.1| Msk1p [Saccharomyces cerevisiae Vin13]
          Length = 517

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 101/256 (39%), Gaps = 17/256 (6%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYG--------ITQVVANPDSACFEIAKSVRSEWVLC 72
            ++G +  +R  G  I+F+D+ +              V  N      E   +        
Sbjct: 43  SINGRIKSIRFSGQKIVFIDLYNGSSGLKNDTQLQLIVNYNKIGGSSEDKANFSEYMNFL 102

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +        +      + L   K+ I+    +LPLP    R   E+     R +D
Sbjct: 103 KKGDYIKALGYPGFSQSRVKMLSLICNKLPIVLSVSQLPLPS---RLNDETKIKSNRVVD 159

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF 191
            + +     ++ R RII  +R  +   NF+E  TPIL+  S+   A+ F+  S+      
Sbjct: 160 YQLNGTQ-TLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDH 216

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  AP+ + + L+ SG  + ++I   FR+E   S     EF  L+   +++  DDI+ 
Sbjct: 217 LELRIAPELWLKRLIISGLQKVYEIGKVFRNEGIDSTHN-AEFSTLEFYETYMSMDDIVT 275

Query: 252 TMENVLRGVFEEFSNG 267
             E++ + +       
Sbjct: 276 RTEDLFKFLITNLQKF 291



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 9/104 (8%)

Query: 468 SLKGNDLL-SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG-- 524
            L   D        ++++   G E  +     +  ++ LQ F       E+  N+     
Sbjct: 405 PLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQLQKFLQQKQINELTGNKTETLS 464

Query: 525 ------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                      + GMPP GG   GIDR+ ML    K + EV  F
Sbjct: 465 PVIDYQYVETMKYGMPPVGGFGLGIDRLCMLFCDKKRIEEVLPF 508


>gi|84998476|ref|XP_953959.1| asparaginyl-tRNA synthetase (chloroplast/mitochondrial precursor)
           [Theileria annulata]
 gi|65304957|emb|CAI73282.1| asparaginyl-tRNA synthetase (chloroplast/mitochondrial precursor),
           putative [Theileria annulata]
          Length = 590

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 99/269 (36%), Gaps = 20/269 (7%)

Query: 20  FVRLSGWVHRVR--PHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGL 76
            V   G+V  +R      + F+DI D   +  +    +    F+  + +++   +   G 
Sbjct: 125 TVNTRGYVQEIRRINSQNLYFIDINDGSTLANLQIVVNKANNFKELELLKNGDHIYAAGT 184

Query: 77  VMSRSAETINANIITGQIELSAQ----KIEILSVAE-ELPLPVFGEREYPESIRFKYRFL 131
           +  R       ++    + ++      K++I   +E EL  PV    EY +    KY   
Sbjct: 185 IDKRRGVPSERSLSDFDLYINHDNPEHKLKIHKYSENELENPVIPNIEYSDEYLRKYTHF 244

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--------ARDFLVP 183
             R       I  R+ I + +     ++NF E  TP LT  + E         A D    
Sbjct: 245 RFRNKQFRSIIGIRSAIKSYIHEFFQSKNFTEVDTPCLTHMNCENLVPLTLKTASDGTNL 304

Query: 184 SRVN----QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
             +     + +      +  Q +      G  + ++I P FR E   + R   EF+ ++ 
Sbjct: 305 DTLGSENTEKNIPVNLSSTGQMELEFACYGLGKVWKIGPSFRAERSDTIRHANEFWMIEA 364

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           E+       ++N ++ ++RG        +
Sbjct: 365 ELPDASLKGMINLIQEMVRGCATYILQKH 393



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 10/110 (9%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYD-LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           PF M +       G+    I    +D L   G+EIA G IR H  EV+ +      +S E
Sbjct: 489 PFYMKRTD-----GSVNSRITVENFDILAPFGYEIAGGSIREHEYEVLKRKMDERKVSGE 543

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             E ++  L +       PHGG   G DR+VML+   +N+++V+ FP+++
Sbjct: 544 EYE-KYINLRKNIYL---PHGGFGVGFDRLVMLMTMKENIKDVTPFPVTK 589


>gi|167536459|ref|XP_001749901.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771616|gb|EDQ85280.1| predicted protein [Monosiga brevicollis MX1]
          Length = 423

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 91/217 (41%), Gaps = 17/217 (7%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           + G +   + +R+ G V  VR  G  + F D+ DH G  QV+ +         + +    
Sbjct: 95  EPGATAQDTQMRICGRVTSVRAMGKHLYFSDLEDHSGRIQVMCSK--------RHLDEVS 146

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
              +                 TG+  L AQ + +++  +        ++      + + R
Sbjct: 147 QQRLLHRHDHIEVFGSPGKTKTGEPTLKAQLVRVIAPCQAQLPDHIEDK----EKQVRER 202

Query: 130 FLDLRR--DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRV 186
            + L    + L + +  R ++++++R      +F+E  TPIL+A S    AR F+  +  
Sbjct: 203 HIYLNTVDNDLRQTLKMRNQVLSTIREFFALRDFVEVETPILSAQSGGAIARPFITRANA 262

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            Q   + L  AP+ Y + L+  G  R F+I   FR+E
Sbjct: 263 LQADLH-LRIAPELYLKRLVIGGLHRVFEIGKVFRNE 298



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 4/88 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPP 535
            + +L  NG E+ +     +      + F      ++   +          +A + G+PP
Sbjct: 323 ERMELFINGAELCNAYQELNDPAEQRRRFEAQHRERQQGNDELPLPDEDFCQALEAGLPP 382

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             G   G+DR++M+L G  ++R+V  FP
Sbjct: 383 TVGWGLGVDRVIMVLSGKPHIRDVLAFP 410


>gi|320582939|gb|EFW97156.1| Mitochondrial lysine-tRNA synthetase [Pichia angusta DL-1]
          Length = 531

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 18/264 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           +L V D   F+ L+G +  +R  G   +FLD+       QVVAN         +      
Sbjct: 70  ELRVIDDAKFI-LNGKIASIRRAGKGSMFLDLVQDGQKVQVVANHKMMGLTNGEFADWHG 128

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQK-IEILSVAEELPLPVFGEREYPESIRFKY 128
                  V             TG++ L A + + + + A     P F          +  
Sbjct: 129 QFKPGDYVSCTG---HPGTTNTGELSLKASERLRLAAPALHPVPPAF----RDPGKVYSN 181

Query: 129 RFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPS-- 184
           R +D L      + +V R R+++++R  +    F+E +TPIL + +S   A  F   S  
Sbjct: 182 RVIDYLANGRSREVMVARARLVSTLRRFLEDHGFMEFATPILGSGNSGANATPFTTTSVH 241

Query: 185 ---RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                ++    ++  AP+ + + L+ SGFD+ ++I P FR+E   +   P EF   +   
Sbjct: 242 VKNNRDEPVQLSMRVAPELWLKKLVISGFDKVYEIGPVFRNEGVDATHNP-EFTSCEFYA 300

Query: 242 SFVEQDDILNTMENVLRGVFEEFS 265
           +F      +   E + + +  E S
Sbjct: 301 TFTSLAQTMEFTEKLFQRLIAELS 324



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 5/89 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVM-----LQAFSNVGISKEVVENRFGGLYRAFQCGM 533
           + +++L  +G EI +     +           Q  +    +             A + G+
Sbjct: 434 SNRFELYIDGTEIINAYEEENNPFKQAAKFAQQLSARTQHNDTDAILPDSAYVEAMEWGL 493

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           PP  G   GI+R VM   G + + +V  F
Sbjct: 494 PPTTGWGMGIERAVMFFTGCERIDQVLPF 522


>gi|322695320|gb|EFY87130.1| aspartyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 553

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 56/286 (19%), Positives = 97/286 (33%), Gaps = 46/286 (16%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDI-----RDHYGITQVVANP---DSACFEIAKSVRSEW 69
             V +  W+ + R     + F+++      D  G+               +   S+  E 
Sbjct: 80  KTVIVRAWLQKSRVQSAKMGFVELRKGGNWDIQGVIMASDQEPLVSRRMVKWVASINPES 139

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE------- 122
            + ++  V        +  +     EL   K  +L+ A  +     G    P        
Sbjct: 140 FVAVEAKVKKPLEPVKSCRVS--GFELHITKCFVLAPAPAVLGMTIGTASQPIVNFSDES 197

Query: 123 ------------SIRFKYR--------FLDL-----RRDTLHKNIVKRTRIINSMRCRMI 157
                           ++          LD      R          R  +    R  + 
Sbjct: 198 EQAGDVDAGKVADAASEHTAPAASMLTHLDNIAMHKRAPVQQAIADIRIEVKRLFRSYLE 257

Query: 158 AENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
           +  F E   P L  ++ EG  +    +   + +F A  Q+PQ YKQ  +A G +R F I 
Sbjct: 258 SRGFKEFEPPCLIGAASEGGGNVFRLAYFGEEAFLA--QSPQFYKQFEIAGGRERVFSIG 315

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFE 262
           P FR E+  + R   EF  LD+EM   +   ++L+ +E VL  +F 
Sbjct: 316 PVFRAENSNTPRHMTEFTGLDLEMEIKDSYTEVLSILEGVLLSIFR 361



 Score = 42.7 bits (99), Expect = 0.20,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 5/119 (4%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF        +  G+ +    A  YD+   G E+ SGG R H    +      
Sbjct: 436 KFPETARPFYAKLDDAGTTVGDGVRVTNA--YDMFLRGQEVLSGGQRIHDPVELEARIRA 493

Query: 511 VGISKEVVENRFGGLYRAFQC-GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
            G+  +    +       FQ  G+PPHGG   G+DR+V  +LG  +V   + +P +   
Sbjct: 494 KGVDPKSGGIK--EYLTTFQQVGVPPHGGGGIGLDRVVAWILGLPSVHLAAYYPRTPKR 550


>gi|323346903|gb|EGA81182.1| Msk1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323352574|gb|EGA85073.1| Msk1p [Saccharomyces cerevisiae VL3]
          Length = 537

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 101/256 (39%), Gaps = 17/256 (6%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYG--------ITQVVANPDSACFEIAKSVRSEWVLC 72
            ++G +  +R  G  I+F+D+ +              V  N      E   +        
Sbjct: 63  SINGRIKSIRFSGQKIVFIDLYNGSSGLKNDTQLQLIVNYNKIGGSSEDKANFSEYMNFL 122

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +        +      + L   K+ I+    +LPLP    R   E+     R +D
Sbjct: 123 KKGDYIKALGYPGFSQSRVKMLSLICNKLPIVLSVSQLPLPS---RLNDETKIKSNRVVD 179

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF 191
            + +     ++ R RII  +R  +   NF+E  TPIL+  S+   A+ F+  S+      
Sbjct: 180 YQLNGTQ-TLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDH 236

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  AP+ + + L+ SG  + ++I   FR+E   S     EF  L+   +++  DDI+ 
Sbjct: 237 LELRIAPELWLKRLIISGLQKVYEIGKVFRNEGIDSTHN-AEFSTLEFYETYMSMDDIVX 295

Query: 252 TMENVLRGVFEEFSNG 267
             E++ + +       
Sbjct: 296 RTEDLFKFLITNLQKF 311



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 9/104 (8%)

Query: 468 SLKGNDLL-SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG-- 524
            L   D        ++++   G E  +     +  ++ LQ F       E+  N+     
Sbjct: 425 PLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQLQKFLQQKQINELTGNKTETLS 484

Query: 525 ------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                      + GMPP GG   GIDR+ ML    K + EV  F
Sbjct: 485 PVIDYQYVETMKYGMPPVGGFGLGIDRLCMLFCDKKRIEEVLPF 528


>gi|256274455|gb|EEU09357.1| Msk1p [Saccharomyces cerevisiae JAY291]
          Length = 576

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 100/256 (39%), Gaps = 17/256 (6%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYG--------ITQVVANPDSACFEIAKSVRSEWVLC 72
            ++G +  +R  G  I+F+D+ +              V  N      E   +        
Sbjct: 102 SINGRIKSIRFSGQKIVFIDLYNGSSGLKNDTQLQLIVNYNKIGGSSEDKANFSEYMNFL 161

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +        +      + L   K+ I+    +LPLP    R   E      R +D
Sbjct: 162 KKGDYIKALGYPGFSQSRVKMLSLICNKLPIVLSVSQLPLPS---RLNDEIKIKSNRVVD 218

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF 191
            + +     ++ R RII  +R  +   NF+E  TPIL+  S+   A+ F+  S+      
Sbjct: 219 YQLNGTQ-TLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDH 275

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  AP+ + + L+ SG  + ++I   FR+E   S     EF  L+   +++  DDI+ 
Sbjct: 276 LELRIAPELWLKRLIISGLQKVYEIGKVFRNEGIDSTHN-AEFSTLEFYETYMSMDDIVA 334

Query: 252 TMENVLRGVFEEFSNG 267
             E++ + +       
Sbjct: 335 RTEDLFKFLITNLQKF 350



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 9/104 (8%)

Query: 468 SLKGNDLL-SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG-- 524
            L   D        ++++   G E  +     +  ++ LQ F       E+  N+     
Sbjct: 464 PLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQLQKFLQQKQINELTGNKTETLS 523

Query: 525 ------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                      + GMPP GG   GIDR+ ML    K + EV  F
Sbjct: 524 PVIDYQYVETMKYGMPPVGGFGLGIDRLCMLFCDKKRIEEVLPF 567


>gi|323349520|gb|EGA83744.1| Krs1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 309

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 75/193 (38%), Gaps = 14/193 (7%)

Query: 19  SFVRLSGWVHRVRPHG-GIIFLDIR-DHYGITQVVANPDSACFEIAKS----VRSEWVLC 72
             V ++G +H  R  G  + F  +  D   +  +    D    +  +     ++   ++ 
Sbjct: 122 EKVSIAGRIHAKRESGSKLKFYVLHGDGVEVQLMSQLQDYCDPDSYEKDHDLLKRGDIVG 181

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           ++G V      T       G++ +   ++++L+      LP        +  R++ R+LD
Sbjct: 182 VEGYV----GRTQPKKGGEGEVSVFVSRVQLLTPCL-HMLPADHFGFKDQETRYRKRYLD 236

Query: 133 LRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGS 190
           L  +       + R+ II  +R  +    FIE  TP++   +    A+ F+         
Sbjct: 237 LIMNKDARNRFITRSEIIRYIRRFLDQRKFIEVETPMMNVIAGGATAKPFITHHNDLDMD 296

Query: 191 FYALPQAPQQYKQ 203
            Y +  AP+ + +
Sbjct: 297 MY-MRIAPELFLK 308


>gi|115388583|ref|XP_001211797.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114195881|gb|EAU37581.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 419

 Score =  117 bits (294), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 12/216 (5%)

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKI-EILSVA-EELPLPVFGEREYP 121
             +  + L   G   S + +        G++ + A ++  +LS    ++PL        P
Sbjct: 14  EFKQLYRLLRRGDAFSVTGKPH--RTGRGELTVVASELPRLLSPCLHDVPLDATAHENSP 71

Query: 122 ESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARD 179
                  R +  L   T    I  R+ II  +R   +  +F+E +TPI+ + +    AR 
Sbjct: 72  YP-----RHVQFLADQTTADIIRARSAIIQYLRQFFLDRSFMEVNTPIVASIAGGAIARP 126

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F   +        +L  AP+ + + L+  GFDR F+I P FR+E       P EF   + 
Sbjct: 127 FYTAATEFPERQLSLRIAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNP-EFTTCEF 185

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
             ++   +D+++  E +L G+       N       
Sbjct: 186 YHAYANLEDLMSITETLLSGMAGHLRQLNPNGTLHP 221



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 45/139 (32%), Gaps = 21/139 (15%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +  +C    +I++ P               +P T  +               A + +L  
Sbjct: 288 VEPDCIHPTFIINPP----ECLSPLSKSFTHPTTGQR--------------VAARGELFI 329

Query: 487 NGFEIASGGIRNHMSEVMLQAFS---NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
            G EI +     +      + F             E        A + G+P  GG   GI
Sbjct: 330 EGREIVNTYEEENSPFEQRRKFEDQVQYSKEANEAEEIDESYLEALEWGLPSTGGWGCGI 389

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR+ ML  GAK + +V  F
Sbjct: 390 DRLCMLFTGAKRIGDVLPF 408


>gi|156843229|ref|XP_001644683.1| hypothetical protein Kpol_1056p26 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115331|gb|EDO16825.1| hypothetical protein Kpol_1056p26 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 483

 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 53/275 (19%), Positives = 107/275 (38%), Gaps = 23/275 (8%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDHYGITQVV-ANPDSACFEIAKSVRSEWVLCIDGL-VMSR 80
           ++GW+  VR    + F+DI+D   + ++    P  +   ++  V +       G  +  +
Sbjct: 32  INGWIKSVRLLKKVAFIDIQDGTILKELKIVVPFDSQSNLSSEVATFLKSLRTGQSIAIK 91

Query: 81  SAETINANIITGQIELSAQK----IEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
            A+ +       + EL+       I I+    E       ++ +          L  R  
Sbjct: 92  DAKLVETEGREQRFELNITDPIDNISIIGNVSESYPLQ--KKYHSLPYLRTLPTLKHRTS 149

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPS---RVNQGSFYA 193
            L   +  R+ +  +M        F + S PILT S  EGA +         V +   Y 
Sbjct: 150 YLGSLLRFRSELEYNMATFFKLNQFTKASPPILTGSDCEGAGELFRVEANGYVEKKQHYF 209

Query: 194 ----LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDD 248
                     Q +  ++A  F R + ++PCFR E+  ++R   EF+ ++ E  F  +  +
Sbjct: 210 GKPTYLTVSLQLQLEILAMAFSRAWSLSPCFRAEESDTNRHLSEFWMMEAEWCFTKDTKE 269

Query: 249 ILNTMENVLRGV-------FEEFSNGNTVSNNFLR 276
           +   ++++++ +       F++F   N   N   R
Sbjct: 270 LTTFVKDMIQYITRESYKNFDDFIPKNIPENCLPR 304



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 4/97 (4%)

Query: 473 DLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +        +DL+  G  EI  G IR    E++ +  S   ++K              + 
Sbjct: 386 NPDGQTVACFDLLVPGIGEIVGGSIREDNFELLSKEVSRRQMNKNG---ELDWYLSLRKE 442

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           G  PHGG   G++R V  L G  N+R+   F  + + 
Sbjct: 443 GSVPHGGFGLGLERFVSYLYGNHNIRDAIPFYRAASG 479


>gi|213400765|gb|ACJ47031.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Tribolium
           confusum]
          Length = 168

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 68/172 (39%), Positives = 96/172 (55%), Gaps = 7/172 (4%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           GEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +F RI Y +A+ +YG+DKP
Sbjct: 1   GEFYQLDLEMSFVTQEDIFQVIESTLYKVFAKFS-RKSVDKDFPRITYKEAMLKYGSDKP 59

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA-RS 350
           DLRNP+++ +VTE F  SEF +F   +           P K     R+F D+  E   + 
Sbjct: 60  DLRNPLLISDVTEIFRDSEFNIFKSNIERGMVVRAIPAP-KTAEEPRSFFDKKIEHTQKE 118

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            G  GL YI +  D        GP+AK L+     +I+   +++ GDS FF 
Sbjct: 119 FGAKGLGYITFDKDGIAK----GPIAKFLDDNRLNSIKEITNIEPGDSVFFA 166


>gi|190348974|gb|EDK41535.2| hypothetical protein PGUG_05633 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 481

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 98/260 (37%), Gaps = 24/260 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V S V+  G V  VR    + F+D+ D    + +    +    +   + +    +   G 
Sbjct: 39  VDSLVKTQGHVKAVRSFKNLHFVDLSDGSTHSTLNVVLNG---DTNINFKVGQSVSFVGK 95

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVA----EELPLPVFGEREYPESIRFKYRFLD 132
            +                EL     E    A    E        ++            L 
Sbjct: 96  WVESKGSQ--------DYELLYDSTENEHKAAVIGEVPESYPIQKKSSSYQFLRTLPTLR 147

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL-------VPSR 185
            R  +L   +  R+ +  S +      + I+ S P++T+S  EGA +          P  
Sbjct: 148 HRTSSLASVLRLRSFLEGSFQRFFEQNDVIKVSAPLITSSDCEGAGEQFIVEAKDSKPEN 207

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G    L  + Q + ++L +   +R + + PCFR E+  ++R   EF+ L+ E+S++E
Sbjct: 208 PFFGKPAYLTVSTQLHLEVL-SQSLNRVWALTPCFRAEESHTNRHLSEFWMLEAELSYIE 266

Query: 246 -QDDILNTMENVLRGVFEEF 264
               I +  EN++R V ++ 
Sbjct: 267 SVHQICDFTENMIRYVTQDV 286



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 25/149 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +     +I D+P             A  PF MP+        ++  +     
Sbjct: 355 HEKWLAETHFKSPVFITDYP------------KAQKPFYMPE--------SENQNSTVAC 394

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           +DL+  G  E+  G +R H  E +LQ   N  +S E  E          + G  PHGG  
Sbjct: 395 FDLIIPGIGELVGGSVREHNYEKLLQELKNRNMSIEDNE----WYLSIRENGTVPHGGFG 450

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G++R+V  L G  ++++V  FP +   C
Sbjct: 451 MGMERLVAFLSGMASIKDVIAFPRTPGSC 479


>gi|323303244|gb|EGA57042.1| Msk1p [Saccharomyces cerevisiae FostersB]
          Length = 517

 Score =  117 bits (293), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 101/256 (39%), Gaps = 17/256 (6%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYG--------ITQVVANPDSACFEIAKSVRSEWVLC 72
            ++G +  +R  G  I+F+D+ +              V  N      E   +        
Sbjct: 43  SINGRIKSIRFSGQKIVFIDLYNGSSGLKNDTQLQLIVNYNKIGGSSEDKANFSEYMNFL 102

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +        +      + L   K+ I+    +LPLP    R   E+     R +D
Sbjct: 103 KKGDYIKALGYPGFSQSRVKMLSLICNKLPIVLSVSQLPLPS---RLNDETKIKSNRVVD 159

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF 191
            + +     ++ R RII  +R  +   NF+E  TPIL+  S+   A+ F+  S+      
Sbjct: 160 YQLNGTQ-TLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDH 216

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  AP+ + + L+ SG  + ++I   FR+E   S     EF  L+   +++  DDI+ 
Sbjct: 217 LELRIAPELWLKRLIISGLQKVYEIGKVFRNEGIDSXHN-AEFSTLEFYETYMSMDDIVA 275

Query: 252 TMENVLRGVFEEFSNG 267
             E++ + +       
Sbjct: 276 RTEDLFKFLITNLQKF 291



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 9/104 (8%)

Query: 468 SLKGNDLL-SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG-- 524
            L   D        ++++   G E  +     +  ++ LQ F       E+  N+     
Sbjct: 405 PLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQLQKFLQQKQINELTGNKTETLS 464

Query: 525 ------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                      + GMPP GG   GIDR+ ML    K + EV  F
Sbjct: 465 PVIDXQYVETMKYGMPPVGGFGLGIDRLCMLFCDKKRIEEVLXF 508


>gi|297689832|ref|XP_002822341.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           [Pongo abelii]
          Length = 333

 Score =  117 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 72/171 (42%), Gaps = 10/171 (5%)

Query: 12  LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           LG  +  G  +++ GW+  VR    ++FL + D   +  +    DS     ++ +     
Sbjct: 34  LGTQNASGERIKVQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGL--DSRELTFGSS 91

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + + G ++   ++  N       +EL A+KI+++   +    P+  +  +P     +Y  
Sbjct: 92  VEVQGQLIKSPSKGQN-------VELKAEKIKVIGNCDAKDFPIKYKERHPLEYLRQYPH 144

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              R + L   +  R+    ++        F+   TPI+T++  EGA +  
Sbjct: 145 FRCRTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELF 195



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 25/137 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             +I+++P                PF M                 A   DL+  G  E+ 
Sbjct: 219 PVFIINYPL------------VLKPFYMRDNED------GPQHTVA-AVDLLVPGVGELF 259

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            GG+R      + +  +  G+++      +       + G  PHGG   G +R +  +LG
Sbjct: 260 GGGLREERYHFLEERLARSGLTEV-----YQWYLDLRRFGSVPHGGFGMGFERYLQCILG 314

Query: 553 AKNVREVSLFPMSQNFC 569
             N+++V  FP   + C
Sbjct: 315 VDNIKDVIPFPRFPHSC 331


>gi|151944461|gb|EDN62739.1| mitochondrial lysyl-tRNA synthetase [Saccharomyces cerevisiae
           YJM789]
          Length = 576

 Score =  117 bits (292), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 101/256 (39%), Gaps = 17/256 (6%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYG--------ITQVVANPDSACFEIAKSVRSEWVLC 72
            ++G +  +R  G  I+F+D+ +              V  N      E   +        
Sbjct: 102 SINGRIKSIRFSGQKIVFIDLYNGSSGLKNDTQLQLIVNYNKIGGSSEDKANFSEYMNFL 161

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +        +      + L   K+ I+    +LPLP    R   E+     R +D
Sbjct: 162 KKGDYIKALGYPGFSQSRVKMLSLICNKLPIVLSVSQLPLPS---RLNDETKIKSNRVVD 218

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF 191
            + +     ++ R RII  +R  +   NF+E  TPIL+  S+   A+ F+  S+      
Sbjct: 219 YQLNGTQ-TLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDH 275

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  AP+ + + L+ SG  + ++I   FR+E   S     EF  L+   +++  DDI+ 
Sbjct: 276 LELRIAPELWLKRLIISGLQKVYEIGKVFRNEGIDSTHN-AEFSTLEFYETYMSMDDIVV 334

Query: 252 TMENVLRGVFEEFSNG 267
             E++ + +       
Sbjct: 335 RTEDLFKFLITNLQKF 350



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 9/104 (8%)

Query: 468 SLKGNDLL-SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG-- 524
            L   D        ++++   G E  +     +  ++ LQ F       E+  N+     
Sbjct: 464 PLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQLQKFLQQKQINELTGNKTETLS 523

Query: 525 ------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                      + GMPP GG   GIDR+ ML    K + EV  F
Sbjct: 524 PVIDYQYIETMKYGMPPVGGFGLGIDRLCMLFCDKKRIEEVLPF 567


>gi|301614211|ref|XP_002936592.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           [Xenopus (Silurana) tropicalis]
          Length = 454

 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 82/207 (39%), Gaps = 25/207 (12%)

Query: 21  VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           V+L GWV  VR    ++FL I D   +  +    +    ++  SV     + + G+++  
Sbjct: 47  VKLQGWVRSVRAQKEVLFLHINDGSSMENLQIVAEP---DLKNSVSFGSSVEVQGMLVKS 103

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
             +  N       +EL A+ I I+   + +  P   +  +      ++  L  R  T   
Sbjct: 104 LHKKQN-------VELKAEGIRIIGPCDSVDFPFKLKERHSPEYVRQFPHLRCRTPTFSS 156

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------QGSFYA 193
            +  R+    +++       +    TPI+T++  EGA +       N       + SF+ 
Sbjct: 157 LLRIRSEATAAIQEFFKTNGYTHIHTPIITSNDCEGAGELFKVEAANKSPAAGEESSFFG 216

Query: 194 LPQ----APQQYKQLLMASGFDRYFQI 216
           +P     + Q + +  + SGF   ++ 
Sbjct: 217 VPAFLTVSGQLHLE--VMSGF--IYKF 239



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 52/137 (37%), Gaps = 25/137 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             +++++P                PF             D     A   DL+  G  E+ 
Sbjct: 340 PVFVINYPL------------ELKPFYARDNE-------DGPQQTAAAVDLLVPGIGELF 380

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G +R    +++ Q    +G+     ++ +       Q G  PHGG   G +R +  +LG
Sbjct: 381 GGSLREERPQLLQQRLDRLGL-----KDTYQWYLDLRQFGSVPHGGFGMGFERYLQCILG 435

Query: 553 AKNVREVSLFPMSQNFC 569
            +N+++V  FP   + C
Sbjct: 436 VENIKDVIPFPRFSHSC 452


>gi|242785470|ref|XP_002480601.1| aspartyl-tRNA synthetase Dps1, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218720748|gb|EED20167.1| aspartyl-tRNA synthetase Dps1, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 554

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 59/303 (19%), Positives = 106/303 (34%), Gaps = 50/303 (16%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRD-HYGITQVVANPDS-----ACFEIAKS 64
           LG       V +   V   R     + FL +R     +  V+A P          +    
Sbjct: 95  LGEEHYEKEVTVVARVDNTRSQSAKLGFLMLRQKGKKLQTVIAAPQEGPVSRQMVKWTTG 154

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +    ++ + G +  + A  I +  +T ++EL  +KI +++ A ++      + E P  +
Sbjct: 155 LNVNSIVQVTG-IAKKPAVPIASATLT-ELELQIKKIYMIAEAAQVLPMQVKDAERPPPL 212

Query: 125 ----------------------RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFI 162
                                 R   R LDL+ +T        + +       M+     
Sbjct: 213 TDGIEGEPELDAEGVPVVTLKTRLDNRVLDLQTETSQAITWISSGVAQLFTEFMLKSGAR 272

Query: 163 ECSTPILTASSP--EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
              +  L+ SS   EG                 L Q+PQ  KQ+ +A   +  F++ P F
Sbjct: 273 WIFSSKLSGSSTKEEG----------------YLAQSPQLMKQMAIAGDMESVFEVGPVF 316

Query: 221 RDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           R E+  + R   EF  LD E +F     ++L+  E +L  +  E           ++  Y
Sbjct: 317 RAENSNTHRHLTEFTGLDFEKTFRHHYHEVLDFAEELLVFILTELKERYKDEIAVIQKSY 376

Query: 280 DDA 282
             A
Sbjct: 377 PKA 379



 Score =  104 bits (259), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 50/188 (26%), Positives = 76/188 (40%), Gaps = 25/188 (13%)

Query: 384 TEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-F 440
            +   +RL+  DG +    AG D  +  +F  D    + ++LG I    ++  + ++D F
Sbjct: 386 KDGKALRLNYMDGVALLKEAGVDTSEQEAFENDFTTAMEKKLGQIIREKYDTDFYVLDRF 445

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P             A  PF            ND     +  YD    G EI SG  R + 
Sbjct: 446 PM------------AVRPFYTKAD------PNDP--TFSHSYDFFMRGEEIMSGAQRIND 485

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            + + ++    G+  +     F     AF+ G PPH G   G++RIVM  LG  NVR  +
Sbjct: 486 VKELEESMIKKGVDPKS--EGFEDYLNAFRQGCPPHAGGGLGLNRIVMFFLGLPNVRLAT 543

Query: 561 LFPMSQNF 568
           LFP     
Sbjct: 544 LFPRDPQR 551


>gi|290559873|gb|EFD93196.1| aspartyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 112

 Score =  116 bits (291), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 1/111 (0%)

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
            NG EI  G +R +  E+ L+    +GI +E     FG L  A   G P   G A G+DR
Sbjct: 1   MNGNEIGGGAVRINNREMQLKILDMIGIHEEDAMKNFGFLIEALSYGAPKDIGFAIGLDR 60

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL-RELGLRIVENP 595
            VMLL GA+++R+  LFP +++F   + GSP+ +   +L  +  L I +  
Sbjct: 61  FVMLLKGAQSIRDFILFPKTKSFESPIDGSPTIIENSRLSDDYNLEIRDKK 111


>gi|163751754|ref|ZP_02158972.1| asparaginyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161328406|gb|EDP99565.1| asparaginyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 329

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 79/258 (30%), Gaps = 45/258 (17%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG------------- 189
             R  +  ++      E FI  STP++TAS  EGA +    S ++               
Sbjct: 2   RVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFQVSTLDMENLPRTDEGKVDYS 61

Query: 190 -SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             F+   A      Q      A    + +   P FR E+  + R   EF+ ++ E++F +
Sbjct: 62  EDFFGKEAFLTVSGQLNAETYACALSKVYTFGPTFRAENSNTSRHLAEFWMVEPEVAFAD 121

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RICYDDAIR 284
            DDI    E +L+  F           +F                      ++ Y +A+ 
Sbjct: 122 LDDIAALAEQMLKFCFRAVLEERRDDLDFFAQRVDKTVIERLESFVTSDFAQVDYTEAVE 181

Query: 285 RYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
                       +   +   +EH  +     F   + V    +            R   D
Sbjct: 182 ILKNCGKKFEYAVEWGIDLQSEHERYLAEEHFKAPVVVKNYPKDI-----KAFYMRLNDD 236

Query: 343 RMNEWARSQGQPGLAYIF 360
                A     PG+  I 
Sbjct: 237 GKTVAAMDILAPGIGEII 254



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 6/99 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A   D++  G  EI  G  R    +V+      + +SK      +       +
Sbjct: 234 NDDGKTVA-AMDILAPGIGEIIGGAQREERLDVLDARLEEMNLSK----EDYWWYRDLRR 288

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G  PH G   G +R+V  + G  N+R+V  FP +    
Sbjct: 289 YGTVPHAGFGLGFERLVSYVTGVANIRDVIPFPRAPKSA 327


>gi|225563051|gb|EEH11330.1| lysyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 545

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 10/166 (6%)

Query: 104 LSVAEELPLPVFGEREYPESIRFKY-------RFLDLRR-DTLHKNIVKRTRIINSMRCR 155
           LSVA      +     +   +R K        R + L    T    +  R+ II  +R  
Sbjct: 164 LSVAASQLPKLITPCLHDVPLRMKDQESSPYDRHVQLLSSPTAADILRARSSIIQYIRIF 223

Query: 156 MIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
            +  +F+E  TPIL + +    AR F   +        +L  AP+ + + L+  GFD+ F
Sbjct: 224 FLDRSFMEVETPILASVAGGAVARPFQTSATEFPDRPLSLRIAPELWLKRLVVGGFDKVF 283

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +I P FR+E       P EF   +   +F + + ++   E+   G+
Sbjct: 284 EIGPSFRNEGLDKTHNP-EFTTCEFYHAFADLETLITLTESFFTGL 328



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 4/92 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN---VGISKEVVENRFG-GLYRAFQ 530
               A + +L  +  E+ +     +      + F       +     E +      +A Q
Sbjct: 444 GQTVAARAELFIDQREVVNMYEEENSPFEQRRKFEIQLGFQVPAVEAEGKMDENYLQALQ 503

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            G+PP GG   G+DR+ ML  GAK + +V  F
Sbjct: 504 WGLPPTGGWGCGVDRLCMLFTGAKRIGDVLSF 535


>gi|323307440|gb|EGA60714.1| Msk1p [Saccharomyces cerevisiae FostersO]
          Length = 384

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 101/256 (39%), Gaps = 17/256 (6%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYG--------ITQVVANPDSACFEIAKSVRSEWVLC 72
            ++G +  +R  G  I+F+D+ +              V  N      E   +        
Sbjct: 63  SINGRIKSIRFSGQKIVFIDLYNGSSGLKNDTQLQLIVNYNKIGGSSEDKANFSEYMNFL 122

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G  +        +      + L   K+ I+    +LPLP    R   E+     R +D
Sbjct: 123 KKGDYIKALGYPGFSQSRVKMLSLICNKLPIVLSVSQLPLPS---RLNDETKIKSNRVVD 179

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF 191
            + +     ++ R RII  +R  +   NF+E  TPIL+  S+   A+ F+  S+      
Sbjct: 180 YQLNGTQ-TLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAMAKPFITSSK--DFDH 236

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  AP+ + + L+ SG  + ++I   FR+E   S     EF  L+   +++  DDI+ 
Sbjct: 237 LELRIAPELWLKRLIISGLQKVYEIGKVFRNEGIDSXHN-AEFSTLEFYETYMSMDDIVX 295

Query: 252 TMENVLRGVFEEFSNG 267
             E++ + +       
Sbjct: 296 RTEDLFKFLITNLQKF 311


>gi|321475859|gb|EFX86821.1| hypothetical protein DAPPUDRAFT_307813 [Daphnia pulex]
          Length = 421

 Score =  115 bits (289), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 95/246 (38%), Gaps = 27/246 (10%)

Query: 39  LDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSA 98
           + I D       V  P S C E          + I G V+               +E+  
Sbjct: 1   MHISDGSVEQIQVVIPSSVCDE---DCCFNSAVEISGKVVVSPK-------PNQPVEIQG 50

Query: 99  QKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA 158
           + ++++   +    P    + Y      +   L  + +     +   + I N+++  +I 
Sbjct: 51  ETVKVVGKLDLQSFPFGPRKYYAPEYVRQQIHLRPKTNIYSAILRLSSLITNALQTTLIQ 110

Query: 159 ENFIECSTPILTASSPEGARDFLVP-------------SRVNQGSFYA---LPQAPQQYK 202
           +NF+   TPILT++  EGA +  +              +R  + S++          Q  
Sbjct: 111 DNFVSVFTPILTSNDCEGAGEVFLTRPASDEMCREMGGNRKLEESYFNKKVYLTVSGQLH 170

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVF 261
              +A G  + F + P FR E+ RS R   EF  L+ E++F  +   IL+T+E++++   
Sbjct: 171 LEAIAGGISKVFTLGPTFRSENSRSRRHLAEFRMLEAEIAFCNDLQPILSTIESLVKHSA 230

Query: 262 EEFSNG 267
           +     
Sbjct: 231 KVILEH 236



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 58/152 (38%), Gaps = 28/152 (18%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            EL ++  +     +++D+P                PF M     ++   + +       
Sbjct: 297 HELFLVK-HMGGPTFLVDWP------------AKIKPFYMRTNNDDNSLVSCV------- 336

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+  G  E+  G +R +  +++     ++ +     E          + G  P GG  
Sbjct: 337 -DLLVPGVGELCGGSLRENRYDILKSRLESLNL-----EESLSWYLDLRKYGGSPTGGFG 390

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDLL 572
            G++R++  LL   NV+++  FP + +    +
Sbjct: 391 MGVERLISYLLKIPNVKDIVPFPRTPH-NCPM 421


>gi|309800497|ref|ZP_07694650.1| lysyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308115877|gb|EFO53400.1| lysyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 269

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 110/379 (29%), Gaps = 114/379 (30%)

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  A + + + L+  G +R ++I   FR+E   +   P EF  +++  ++ +  DI  
Sbjct: 1   MVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNP-EFTSIEVYQAYADFQDI-- 57

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
              ++  G+ +  +                    Y   +  +  P    ++ +       
Sbjct: 58  --MDLTEGIIQHAAKSVKGDGP----------VNYQGTEIKINEPFKRVHMVDAIKEITG 105

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAG 371
             F K                         D   E A++        +     E G++  
Sbjct: 106 VDFWK-------------------------DMTFEEAKAIAAEKKVPVEKHYTEVGHI-- 138

Query: 372 MGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNC 431
              +         E +             F+ G P+                        
Sbjct: 139 ---INAFFEEFVEETLIQPT---------FVYGHPVAVS--------------------- 165

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
                    P  + N E+++                             +++L     E 
Sbjct: 166 ---------PLAKKNPEDERFT--------------------------DRFELFIMTKEY 190

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIV 547
            +     +     L  F     +KE+ ++   G       A + GMPP GG+  GIDR+ 
Sbjct: 191 GNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLC 250

Query: 548 MLLLGAKNVREVSLFPMSQ 566
           MLL     +R+V LFP  +
Sbjct: 251 MLLTDTTTIRDVLLFPTMK 269


>gi|15223302|ref|NP_177254.1| SYNC3; ATP binding / aminoacyl-tRNA ligase/ asparagine-tRNA ligase/
           aspartate-tRNA ligase/ nucleic acid binding / nucleotide
           binding [Arabidopsis thaliana]
 gi|20140327|sp|Q9SSK1|SYNC3_ARATH RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic 3; AltName:
           Full=Asparagine--tRNA ligase 3; Short=AsnRS 3
 gi|5902407|gb|AAD55509.1|AC008148_19 Similar to asparaginyl-tRNA synthetases [Arabidopsis thaliana]
 gi|332197025|gb|AEE35146.1| asparaginyl-tRNA synthetase, cytoplasmic 3 [Arabidopsis thaliana]
          Length = 571

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 11/178 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G    G  VR+ GWV   R  G     FL++ D      +    DS+ +++++ V +   
Sbjct: 42  GAKLAGQKVRIGGWVKTGRQQGKGTFAFLEVNDGSCPANLQVMVDSSLYDLSRLVATGTC 101

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + +DG++            +   IELS + +  +   +    P+   +  PE +R     
Sbjct: 102 VTVDGVLKIPPEG----KGLKQSIELSVETVIAVGTVDPTTYPLPKTKLTPEFLRD---V 154

Query: 131 LDLRRDTL--HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           L LR  T         R  +  +        +F+   TPI+T S  EGA +    + +
Sbjct: 155 LHLRSRTNLISAVARIRNALAFATHSFFQEHSFLYIHTPIITTSDCEGAGEMFQVTTL 212



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 37/100 (37%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+ Q    +G+  E  E          + 
Sbjct: 476 NDDEKTVAAMDVLVPKVGELIGGSQREERYDVIKQRIEEMGLPMEPYE----WYLDLRRY 531

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   H G   G +R++    G  N+R+V  FP      DL
Sbjct: 532 GTVKHCGFGLGFERMIQFATGIDNIRDVIPFPRYPGKADL 571



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 3/83 (3%)

Query: 189 GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             F+   A      Q +    A      +   P FR E+  + R   EF+ ++ E++F +
Sbjct: 299 NDFFGRQAFLTVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFAD 358

Query: 246 QDDILNTMENVLRGVFEEFSNGN 268
             D +N  E  ++ + +   +  
Sbjct: 359 IHDDMNCAEAYVKYMCKWLMDKC 381


>gi|294656044|ref|XP_002770214.1| DEHA2C13750p [Debaryomyces hansenii CBS767]
 gi|199430811|emb|CAR65577.1| DEHA2C13750p [Debaryomyces hansenii]
          Length = 508

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 108/265 (40%), Gaps = 30/265 (11%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA---NPDSACFEIAKSVRSEWVLCI 73
           + S +   G +  +R    I F+D+ D      +     +P+S   E+   ++    + +
Sbjct: 41  IESTISTQGHIKSIRQFKNIGFIDLSDGTTFHNLSVVLQDPESTLSEL--HLKVGQSINV 98

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G  ++         +     E +   ++++   E+            ++ +F      L
Sbjct: 99  AGKWIASKGTQKYELLYNP--EANDHNLQVIGDVEDAYPIQKK----SQTYQFLRGLPTL 152

Query: 134 RRDTLHKNIVKRTRIINS--MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---- 187
           R  T     + R R      +     ++NF + + P++T+S  EGA +     +++    
Sbjct: 153 RHRTASLASMLRFRSFMETKLMEFFNSQNFTKTTPPLITSSDCEGAGEQFKVEQLHKKEV 212

Query: 188 -------QGSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                  +  F+  P     + Q + ++L  S  +R + + PCFR ED  ++R   EF+ 
Sbjct: 213 VVDGAVQEEHFFGKPAFLTVSTQLHLEVLTLS-LNRAWTLTPCFRAEDSNTNRHLSEFWM 271

Query: 237 LDMEMSFVEQ-DDILNTMENVLRGV 260
           L+ E+ +++    + +  E+++R V
Sbjct: 272 LEAEICYIDHVSQLTDFTEDMIRYV 296



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 55/149 (36%), Gaps = 20/149 (13%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +     +I D+P             +  PF MP+         +        
Sbjct: 377 HEKWLAGTHFQSPVFITDYP------------RSQKPFYMPKS---HSSVYNPERPTVAC 421

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           YDL+     E+  G +R H  E ++Q  +   ++ + ++            G  PHGG  
Sbjct: 422 YDLILPEIGELVGGSMREHDYENLVQEMTRRNMNLKEMDWYLSTRLN----GTVPHGGFG 477

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G +R++  +   +NV++V  FP     C
Sbjct: 478 MGFERLLSYIGAMENVKDVIPFPRVPQSC 506


>gi|213400763|gb|ACJ47030.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 168

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 70/172 (40%), Positives = 97/172 (56%), Gaps = 7/172 (4%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           GEFYQLD+EMSFV Q+DI   +E+ L  VF +FS   +V  +FL I Y DA+ +YG+DKP
Sbjct: 1   GEFYQLDLEMSFVTQEDIFQVIESTLYKVFAKFS-RKSVDEDFLHITYKDAMLKYGSDKP 59

Query: 292 DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA-RS 350
           DLRNP+++ +VTE F  SEF +F   +           P K     R+F D+  E A + 
Sbjct: 60  DLRNPLLISDVTEIFRDSEFNIFKSNIERGMVVRAIPAP-KTAEEPRSFFDKKIEHAQKE 118

Query: 351 QGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFI 402
            G  GL YI +  D        GP+AK L+     +I+   +++ GDS FF 
Sbjct: 119 LGAKGLGYITFDKDGIAK----GPIAKFLDDNRLNSIKEITNIEPGDSVFFA 166


>gi|303284429|ref|XP_003061505.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456835|gb|EEH54135.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 592

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 72/178 (40%), Gaps = 10/178 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVR--PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G S +G+ V + GWV   R    G + FL++ D  G T +     +    I +   +   
Sbjct: 65  GASLIGATVVVGGWVKTGRVADKGALAFLELNDGSGPTNLQCVVKADVHAIDELKSTGTC 124

Query: 71  LCIDGLVMSRSAETINANIITGQI-ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           + ++G + +           TGQI EL A K+  +   +    P+  ++   E +R K  
Sbjct: 125 VVVEGELRAPPEG------ATGQIVELHATKVLHVGACDAAKYPIAKKKISLEYLRDKI- 177

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            L  R +T+      R  +  +         F+   TP++T S  EGA +    + + 
Sbjct: 178 HLRTRTNTIAAVARIRNALSFATHSFFNKNGFLYVHTPLITQSDCEGAGEMFQVTTLL 235



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 4/86 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    E+  G  R    + +      +G+  E  E          + G   H G   G 
Sbjct: 510 LVPKVGELIGGSQREERIDNLEARMREIGLDPEEYE----WYLDLRRYGTVVHSGFGLGF 565

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFC 569
           +R+V+   G +N+R+V  FP     C
Sbjct: 566 ERLVLFCTGMENIRDVIPFPRWPGNC 591



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 57/196 (29%), Gaps = 44/196 (22%)

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A+DF                   Q      A      +   P FR E+  + R   EF+ 
Sbjct: 322 AKDFFGEPTFL--------TVSGQLNVETYACAMSSVYTFGPTFRAENSNTTRHLAEFWM 373

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT---------------------VSNNFL 275
           ++ E++F +  D +   E+ ++                                    F 
Sbjct: 374 IEPEIAFADLADDMRCAEDYVQYCLRHVLEHCRGDLEFISKMYDKEALERVKHVSETPFG 433

Query: 276 RICYDDAIRRYGTDKPD---LRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
           R+ Y +AI        D      P+   +   TEH       +F + + V    +     
Sbjct: 434 RVSYTEAIDLLEKAVADGKTFVYPVEWGIDLATEHERFLAEEIFKRPVIVYNYPKDI--- 490

Query: 331 AKGGGGNRAFCDRMNE 346
                  +AF  R+NE
Sbjct: 491 -------KAFYMRLNE 499


>gi|330008638|ref|ZP_08306291.1| putative lysine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328535090|gb|EGF61607.1| putative lysine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 312

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/206 (22%), Positives = 76/206 (36%), Gaps = 22/206 (10%)

Query: 152 MRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF 210
           MR  M+A  F+E  TP++        AR F+          Y L  AP+ Y + L+  GF
Sbjct: 1   MRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGF 59

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
           +R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R + +       V
Sbjct: 60  ERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKTEV 118

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE----HFVHSEFRVFSKILSVNPGYEV 326
                          YG    D   P     + E    H   +         +     E 
Sbjct: 119 P--------------YGDQVFDFGKPFEKLTMREAIKKHRPETNMADLDNFDAAKALAES 164

Query: 327 WAI-PAKGGGGNRAFCDRMNEWARSQ 351
             I   K  G  R   +  +E A + 
Sbjct: 165 IGIQVEKSWGLGRIVTEIFDEVAEAH 190



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +         P       + ND+      +++    G EI +G    + +E   Q F
Sbjct: 188 EAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRF 247

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +   +K   ++           A + G+PP  G+  GIDR+VML   +  +R+V LFP 
Sbjct: 248 QDQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPA 307

Query: 565 SQ 566
            +
Sbjct: 308 MR 309


>gi|255078574|ref|XP_002502867.1| predicted protein [Micromonas sp. RCC299]
 gi|226518133|gb|ACO64125.1| predicted protein [Micromonas sp. RCC299]
          Length = 631

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 12/183 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFE--IAKSVR 66
           D G S VG  V+L GWV  VR    + F+++ D   +   Q V N D    E   A  + 
Sbjct: 96  DQGKSRVGDTVQLRGWVRTVRAQKDLSFIEVNDGSSLSGIQAVVNGDVPGREHLDAGDIT 155

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +   + I G+V+               +E++ + I+++  A+    P+  +R   E +R 
Sbjct: 156 TGAAVVIKGIVVESPGG-------KQAVEVAVESIKLIGGADASTFPLQKKRHTLEYLR- 207

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               L  R +T+      R ++  +         F   +TPI+TAS  EGA +    + +
Sbjct: 208 SIAHLRPRTNTIGAVTRVRNQLAYATHTFFQQHGFQYVNTPIVTASDCEGAGEQFQVTTL 267

Query: 187 NQG 189
             G
Sbjct: 268 ING 270



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 46/154 (29%), Gaps = 27/154 (17%)

Query: 190 SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+  P       Q    + A      +   P FR E+  + R   EF+ ++ E++F + 
Sbjct: 363 DFFGKPSYLTVSGQLNAEIYACAMRDVYTFGPTFRAENSNTSRHLAEFWMVEPELAFADL 422

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFL----------------------RICYDDAIR 284
            D ++  E  L+               F                       RI Y +A+ 
Sbjct: 423 QDDMDCAEAYLKHCLTHVLEHCDEDLEFFEKNISKDNLRERLRGVATSDFARITYTEAVD 482

Query: 285 RYGTDKPDLRNPIIM--HNVTEHFVHSEFRVFSK 316
                K     P+       +EH  +    VF  
Sbjct: 483 HVLKAKKKFEFPVEWGCDLQSEHERYLTEEVFKN 516



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 12/115 (10%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
           +    A   F M +        ND     A    LV    E+  G  R    +V+ +   
Sbjct: 522 RDYPKAVKAFYMRE--------NDDGKTVAAMDVLVPKVGELMGGSQREERLDVLERRIE 573

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            VG+ K      +       + G  PH G   G +R+V  + G +N+R+V  FP 
Sbjct: 574 EVGLEK----ESYWWYLDLRRYGSVPHAGFGLGFERLVQYVTGVENIRDVIPFPR 624


>gi|50310555|ref|XP_455297.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644433|emb|CAG98005.1| KLLA0F04796p [Kluyveromyces lactis]
          Length = 517

 Score =  115 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 52/264 (19%), Positives = 104/264 (39%), Gaps = 12/264 (4%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           L V D  +   L G +  +R  G  I F+++ +     QV+ N  +    + +       
Sbjct: 62  LKVDDRSTTHTLRGKITNMRFSGKKIGFINLLNDEKSLQVIVNLSNLPMSVGEFQAHMRK 121

Query: 71  LCIDGLVMSRSAETINANIITGQIELSA-QKIEILSVAEELPLPVFGEREYPESIRFKYR 129
             I   +       ++     G + L    ++++LS A+    P    +    S R   +
Sbjct: 122 FKIGDHIQVTGFPGVSQK--QGTLSLKVNSELKMLSPAQIPIPP----KLLDSSKRNSNK 175

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRV-N 187
            LD   +      + R  +   +R  +  + FIE  TPI++  S+   A+ F+      +
Sbjct: 176 TLDYLVNGTEAIYI-RHLVTKRIREWLYKQEFIEVETPIISSKSNGANAKPFITHCTAID 234

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           +   + L  AP+ + + L   G ++ F+I   FR+E   S   P EF  L+    ++  +
Sbjct: 235 KEQPFELRIAPELWLKRLCIGGMNKIFEIGKVFRNEGIDSTHNP-EFTTLEFYQCYINME 293

Query: 248 DILNTMENVLRGVFEEFSNGNTVS 271
            ++   E++L  V +         
Sbjct: 294 QLIEMSESLLIYVCQGIDKPKAQE 317



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 11/113 (9%)

Query: 456 HNPFTMPQGGMESLKGNDLLSI-KAFQYDLVCNGFEIASGGIRNHMSEVMLQAF-----S 509
           H+P  +       L   D  ++    ++++  N  E  +     +  ++ L+ F     S
Sbjct: 401 HHPTVLSP-----LAKTDSNNVQITKRFEIFINRKEYMNAYEEENCPDLQLEKFTNQLAS 455

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                 + +        +A + GMPP GG   GIDR+ MLL   + + EV  F
Sbjct: 456 KTQFKDDEMMAVDLPYVQAMKYGMPPIGGFGLGIDRLCMLLADTQRIEEVLSF 508


>gi|290978180|ref|XP_002671814.1| aspartyl-tRNA synthetase [Naegleria gruberi]
 gi|284085386|gb|EFC39070.1| aspartyl-tRNA synthetase [Naegleria gruberi]
          Length = 461

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 107/266 (40%), Gaps = 11/266 (4%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKS 64
             ++  S  G  +RL     RV   G + F+ +R +    Q       + +    +    
Sbjct: 30  IEEINKSMEGETIRLIARASRVVKKGKLCFVRLRRNSHSIQACFLAKNDQEREMVKYIGG 89

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E ++ + G+++ R ++   +N    ++EL  ++I  LS A++L   +    +  +S 
Sbjct: 90  IPHESIVEVVGIIVMRKSK---SNETVSELELEMKEIYCLSRAQKLDYELDELEDMRQSR 146

Query: 125 RF-KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
                R++ LR   +H     ++ I       M +++F E  TP +  +  +        
Sbjct: 147 SLHTKRYVSLRHSFMHHIFKLQSLIGRKFCEYMYSKDFTEIHTPHIVKNQSDNNISSFTF 206

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                G+   L  +   ++QL +  G DR F+I+  F      +     E   L+  M+ 
Sbjct: 207 DYF--GNSVELTTSSHLHQQLAIHGGLDRVFEISCAFEKHHGCTHVHLNEKTTLNFGMTI 264

Query: 244 V-EQDDILNTMENVLRGVFEEFSNGN 268
                ++++ ++ +L  + +E S   
Sbjct: 265 ASHYHEVISVVKELLNYIIDEISEYE 290



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 20/103 (19%)

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           + ++  G  +  G    H  E++          K  V      L  A + G  P GG + 
Sbjct: 378 FIILIRGIVVGRGCQYIHDEELL----------KHQVRCHAPDLVSALKYGAQPCGGCSI 427

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQL 584
            ++  +M  L   NVR  SLFP           +P+    EQL
Sbjct: 428 DLELFLMQFLQLSNVRFTSLFPR----------APTIYENEQL 460


>gi|171682464|ref|XP_001906175.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941191|emb|CAP66841.1| unnamed protein product [Podospora anserina S mat+]
          Length = 489

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 77/387 (19%), Positives = 125/387 (32%), Gaps = 56/387 (14%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDH--YGITQVVANPDSACFEIAKSVRSEWVLCID 74
           G  + L  W+   R     + F+++R+   + I  VV        + +  V    V  I 
Sbjct: 1   GKTIILRAWLQTSRTQSAKMAFVELREEGNWTIQGVVTATSEPPEQESPIVSRPMVRWIA 60

Query: 75  GLV----------MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP--- 121
           G+           + R  E +         EL   +  +L+ A  +          P   
Sbjct: 61  GINPESFVVVEAEVQRPIEPVK-RCRVSNFELRITRCYLLAPAPAILGTTLATANRPVVD 119

Query: 122 -------------ESIRFKYR---------FLDL-----RRDTLHKNIVKRTRIINSMRC 154
                        E                 LD      R          R  + +  R 
Sbjct: 120 LNDEAIGAKAGVREEEETDKEGPPAASMLVHLDNIAMRKRAPVQQAIADIRMEMKHLFRS 179

Query: 155 RMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
            + A  F E   P L  ++ EG  +F      +Q +F A  Q+PQ YKQ  +A G  R F
Sbjct: 180 YLKARGFKEFEPPSLIGAASEGGSNFFRMPYFSQEAFLA--QSPQFYKQFEIAGGRKRVF 237

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
            IAP FR E+  + R   EF  LD+EM    +  ++L  +E VL  +F +          
Sbjct: 238 SIAPVFRAENSNTPRHMTEFTGLDLEMEIRKDYSEVLYLLEGVLLYIFRQVHRIFKDEIE 297

Query: 274 FLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKG 333
            +R  Y  +         ++R   +M    +  +  E     + +  +         A G
Sbjct: 298 LVRSVYPSSEILLPEPGQEVR---LMFTQAQQLLREEGPAEFRHVRDDEDMSTPQEKALG 354

Query: 334 GGGNRAFC------DRMNEWARSQGQP 354
               + F       D+  E AR     
Sbjct: 355 ALVRQKFNTDFYVVDKFPETARPFYAK 381



 Score = 49.7 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 54/149 (36%), Gaps = 15/149 (10%)

Query: 422 QELGIINCNCFEFCW-IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAF 480
           + LG +    F   + ++D           K      PF        +    +       
Sbjct: 351 KALGALVRQKFNTDFYVVD-----------KFPETARPFYAKLDDTAAAGSAEGAVKVTN 399

Query: 481 QYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC-GMPPHGGI 539
            +D+   G EI SGG R +  + +       GI          G  + F+  G+PPHGG 
Sbjct: 400 AFDMFLRGQEILSGGQRINHPDELEARIRAKGIDP--ASPGIDGYVQVFRQVGVPPHGGG 457

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             G+DRIV   LG  +V   + +P +   
Sbjct: 458 GIGLDRIVAWYLGLPSVHLAAYYPRTPRR 486


>gi|17556372|ref|NP_499478.1| hypothetical protein Y66D12A.23 [Caenorhabditis elegans]
 gi|15795206|emb|CAC70140.1| C. elegans protein Y66D12A.23, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 448

 Score =  114 bits (285), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 53/286 (18%), Positives = 100/286 (34%), Gaps = 39/286 (13%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            L GW   V+  G  +F+ I        +    +    EI + +R    +   G      
Sbjct: 14  TLDGWAKSVQKSGKNVFVKIDKGRAGEPIQLVANK---EIGQEIRVGSAIRATG------ 64

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
               ++     ++E  A++++++   E          +       K   L  R       
Sbjct: 65  -SLEHSRGAQQEMEFVAEQLKVVGNDENPRYD-----DLSPDNLRKKTHLRARNSKFAAL 118

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV---------NQGSFY 192
           +  R+ I        ++ +FI   TP LT +  EG  +                 +    
Sbjct: 119 LRARSAIFRETHEFFMSRDFIHIDTPKLTRNDCEGGGEVFDVVTTTSTEAGDGGLKEEPM 178

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILN 251
            L  + Q + +  M S   R + + P FR E  +S     EF+ L+ E++FVE  D++  
Sbjct: 179 FLSVSSQLHLE-AMVSRLQRVYILGPSFRAERQQSHAHLSEFHMLEAEVAFVETIDEMCT 237

Query: 252 TMENVLRGVFEEF-------------SNGNTVSNNFLRICYDDAIR 284
            +E+ ++ +                 S     +  F RI YD+A+ 
Sbjct: 238 LVESYIQHMISYLNSSKLEPETAIIGSKIPISNIKFPRIRYDEAVH 283



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 35/130 (26%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            EL ++  +     ++  +P                PF M + G  +L            
Sbjct: 302 NELDLVKLHDDHPIFVTHYP------------VGQKPFYMARDGQLTL-----------S 338

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           +DL+  G  E+A G +R   +E + +                       + G PP GG  
Sbjct: 339 FDLLVPGIGELAGGSLREQSAEELQRRGCG-----------IDWYLEMRRRGQPPTGGFG 387

Query: 541 AGIDRIVMLL 550
            G +R++  L
Sbjct: 388 IGFERMLQYL 397


>gi|297789439|ref|XP_002862686.1| hypothetical protein ARALYDRAFT_497343 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297308355|gb|EFH38944.1| hypothetical protein ARALYDRAFT_497343 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 446

 Score =  114 bits (284), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 69/178 (38%), Gaps = 11/178 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVR--PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G    G  VR+ GWV   R    G   FL++ D      +    DS+ +++++ V +   
Sbjct: 19  GAKLAGQKVRIGGWVKTGRQQGKGKFAFLEVNDGSCPANLQVMVDSSLYDLSRLVATGTC 78

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + +DG++            +   IEL+ + +  +   +    P+   +  PE +R     
Sbjct: 79  VTVDGVLKIPPEG----KGLKQSIELNVESVIDVGTVDPTKYPLPKTKLTPEFLRDL--- 131

Query: 131 LDLRRDTL--HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           L LR  T         R  +  +         F+   TPI+T S  EGA +    + +
Sbjct: 132 LHLRSRTNLISAVARIRNALAFATHSFFQEHGFLYIHTPIITTSDCEGAGEMFQVTTL 189



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 29/64 (45%)

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
             +   P FR E+  + R   EF+ ++ E++F +  D +N  E  ++ +        +  
Sbjct: 292 NVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFADIHDDMNCAEAYVKYMCNWLIKNCSDD 351

Query: 272 NNFL 275
            +F+
Sbjct: 352 MDFM 355


>gi|297744949|emb|CBI38541.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score =  114 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 54/316 (17%), Positives = 96/316 (30%), Gaps = 53/316 (16%)

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           +RS+  +       ++E   +K+  +   +    P+   R   E +R    F+  R  T 
Sbjct: 121 ARSSLKVPPEGTKQRVEFRVEKVHHVGPVDPAKYPLPKTRLTLEFLRV---FVHFRSRTN 177

Query: 139 HKNIVKR--TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV---------- 186
               V R    +  +     +   F+   TPI+T S  EGA +    + +          
Sbjct: 178 MIPAVARICNALAYATHTFFLNHGFLHAHTPIITTSDCEGAGEMFQVTTLISDAEKPGIP 237

Query: 187 -------NQGSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                      F+A         Q +    A      +   P FR E   + R   EF+ 
Sbjct: 238 QKDGKIDYSQDFFARQAFLTVSGQLQVETHACAIGSVYTFGPTFRAEHSHTSRHLAEFWM 297

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL--------------------- 275
           ++ E++F +  D +N  E  ++ + +   +       F+                     
Sbjct: 298 VEPEIAFADLKDDMNCAEAYVKFLCQWLPDNCIDDMEFMAKNFDKGSIDHLRMVASMPFE 357

Query: 276 RICYDDAIRRYG---TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
           RI Y +AI+             N +         + SE   FS  +       V   P  
Sbjct: 358 RISYAEAIKLLEEAVKKDKKFENKVEWG----IDLASEHERFSAEVLFKKLVIVHDYPRG 413

Query: 333 GGGGNRAFCDRMNEWA 348
                    D M   A
Sbjct: 414 IKAFYMRLNDDMKTVA 429


>gi|146413284|ref|XP_001482613.1| hypothetical protein PGUG_05633 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 481

 Score =  114 bits (284), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 99/261 (37%), Gaps = 26/261 (9%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V S V+  G V  VR    + F+D+ D    + +    +    +   + +    +   G 
Sbjct: 39  VDSLVKTQGHVKAVRSFKNLHFVDLSDGSTHSTLNVVLNG---DTNINFKVGQSVSFVGK 95

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAE-----ELPLPVFGEREYPESIRFKYRFL 131
            +                EL     E    A          P+  +    + +R     L
Sbjct: 96  WVESKGSQ--------DYELLYDSTENEHKAAVIGEVPELYPIQKKSLSYQFLRTLPT-L 146

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL-------VPS 184
             R  +L   +  R+ +    +      + I+   P++T+S  EGA +          P 
Sbjct: 147 RHRTSSLASVLRLRSFLEGLFQRFFEQNDVIKVLAPLITSSDCEGAGEQFIVEAKDSKPE 206

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
               G    L  + Q + ++L +   +R + + PCFR E+  ++R   EF+ L+ E+S++
Sbjct: 207 NPFFGKPAYLTVSTQLHLEVL-SQSLNRVWALTPCFRAEESHTNRHLSEFWMLEAELSYI 265

Query: 245 E-QDDILNTMENVLRGVFEEF 264
           E    I +  EN++R V ++ 
Sbjct: 266 ESVHQICDFTENMIRYVTQDV 286



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 25/149 (16%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            E  +   +     +I D+P             A  PF MP+        ++  +     
Sbjct: 355 HEKWLAETHFKSPVFITDYP------------KAQKPFYMPE--------SENQNSTVAC 394

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           +DL+  G  E+  G +R H  E +LQ   N  +S E  E          + G  PHGG  
Sbjct: 395 FDLIIPGIGELVGGSVREHNYEKLLQELKNRNMSIEDNE----WYLSIRENGTVPHGGFG 450

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G++R+V  L G  ++++V  FP +   C
Sbjct: 451 MGMERLVAFLSGMASIKDVIAFPRTPGSC 479


>gi|307197734|gb|EFN78883.1| Probable asparaginyl-tRNA synthetase, mitochondrial [Harpegnathos
           saltator]
          Length = 419

 Score =  113 bits (283), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 94/303 (31%), Gaps = 44/303 (14%)

Query: 33  HGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITG 92
               +F+DI D      +      +      ++     +  +G +              G
Sbjct: 1   MKDTVFVDISDGSTCEILQVVIPKSI--KPDNLSYGSSISAEGELSLTP---------NG 49

Query: 93  QIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIIN 150
           + EL A  + ++      E   P    + Y +    KY  L  R       +  R     
Sbjct: 50  KTELYAVNVHVIGKCNVLEDQYPFAPRKTYDQEYIRKYLHLRPRTRNFASVLRLRDLATT 109

Query: 151 SMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQ----------- 199
            +   +    FI   TPILT++  EGA +  +    ++    ++ +  Q           
Sbjct: 110 VIGDHLRNRGFISIHTPILTSNDCEGAGEVFLVKPQSKEILKSMKKEGQSEDEIYFNTTT 169

Query: 200 ------QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL--- 250
                 Q     MA    + +   P FR E+ +S     EFY L+ E++F+   + L   
Sbjct: 170 YLTVSGQMHLETMARALTKVYTFGPTFRAENSKSRLHLSEFYMLEAEVAFITNVEELIEE 229

Query: 251 ------NTMENVLRGVFEE-----FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
                    + ++     +           +   F  + YD+A          L  PI  
Sbjct: 230 VELLVKEVTKRMIERGASDWQSMGIPEPQWLDKKFGCLTYDEAFDVLTEHASKLECPIKY 289

Query: 300 HNV 302
             V
Sbjct: 290 GEV 292



 Score = 67.8 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 53/151 (35%), Gaps = 29/151 (19%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
            EL ++  N     +++++P      +  K      PF M +         D   + A  
Sbjct: 297 HELFLVQYNNGVPIFVINWP------KNNK------PFYMKECTD------DPSKVAAL- 337

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
            DL+     E+  G IR    E +      +G                 + G  P GG  
Sbjct: 338 -DLLAPDVGELVGGSIREDDYEKLKLKLPTMG--------NLSWYLELRKYGNAPTGGFG 388

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G +R +  +LG  N+++   FP   + C L
Sbjct: 389 MGFERFLQCVLGINNIKDTVPFPRWPHNCKL 419


>gi|167745152|gb|ABZ91898.1| cytoplasmic asparaginyl-tRNA synthetase [Exophiala dermatitidis]
          Length = 227

 Score =  113 bits (283), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 77/206 (37%), Gaps = 9/206 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
              + G+ VR+ G VH +R    IIF+ ++D YG  Q V   +      A ++  E  L 
Sbjct: 26  TAENRGTRVRVLGRVHHLRVQKDIIFVTLKDGYGKMQCVFTGNLIKTYAAMTLTLETSLD 85

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVA--EELPLPVFGEREYPESIRFKYRF 130
           I G + +   +           EL A   +++  A  ++  +    +++         R 
Sbjct: 86  IRGELKALPPKAH----APLDRELHADFFKVIGAAVGDKEAITNKVQQDADPQTLLDNRH 141

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L LR D     +  R  +  + R   +     E + P +  +  EG           + +
Sbjct: 142 LVLRGDNASAVMKVRAAVARAFRQTYLETRLTEVTPPAMVQTQVEGGATLFEFDYYGERA 201

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQI 216
           +  L Q+ Q Y +  + S     F +
Sbjct: 202 Y--LTQSSQLYLETCLPS-LGDVFCV 224


>gi|291336620|gb|ADD96166.1| hypothetical protein [uncultured organism MedDCM-OCT-S05-C185]
          Length = 134

 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/132 (52%), Positives = 92/132 (69%), Gaps = 1/132 (0%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           M SGFDRYFQIAPCFRDED R+DR PGEFYQLD+EMSFVEQ+D+ + +E VL GVFEEF+
Sbjct: 1   MMSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDLEMSFVEQEDVFSEIEPVLAGVFEEFT 60

Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYE 325
              +V   F RI + +A+ +YGTDKPDLR  I + +V++ F +SEF +F+K ++    + 
Sbjct: 61  TW-SVPQPFPRIPFSEAMLKYGTDKPDLRIAIEICDVSDLFENSEFAIFAKTVADGGWFV 119

Query: 326 VWAIPAKGGGGN 337
                  G   +
Sbjct: 120 HCLAQNVGAERS 131


>gi|225467491|ref|XP_002266717.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
          Length = 314

 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 65/195 (33%), Gaps = 23/195 (11%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202
             R  +  +         F+  S+PI+TAS  EGA +    + ++     A      Q  
Sbjct: 3   RVRNALAYATHKFFQENGFVWISSPIITASDCEGAGEQFCVTTLDFFGKPAFLTVSGQLN 62

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
               A+     +   P FR E+  + R   EF+ ++ E++F + +D +      L+ V  
Sbjct: 63  AETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYVVT 122

Query: 263 EFSNG---------------------NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM-- 299
                                     +    NF+++ Y DA+            P+    
Sbjct: 123 YILENCKEDMEFFNTWIEKGIINRLSDVAEKNFVQLTYTDAVELLLRANKKFEFPVKWGC 182

Query: 300 HNVTEHFVHSEFRVF 314
              +EH  +     F
Sbjct: 183 DLQSEHERYITEVAF 197



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 4/102 (3%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    LV    E+  G  R       L+         ++ ++ +      
Sbjct: 216 MRRNDDGKTVAAMDMLVPRVGELIGGSQREER----LEYLEERLDDLKLSKDSYWWYLDL 271

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            + G  PH G   G +R+V    G  N+R+   FP +    +
Sbjct: 272 RRYGSVPHAGFGLGFERLVQFATGIDNIRDAIPFPRTPGSAE 313


>gi|167527404|ref|XP_001748034.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773452|gb|EDQ87091.1| predicted protein [Monosiga brevicollis MX1]
          Length = 555

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 72/191 (37%), Gaps = 16/191 (8%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
              +G  + + GWV   R  G    +FL++ D    T +         +++K   +   +
Sbjct: 34  KKHIGERITVGGWVKTGRIQGKGAFVFLEVNDGSTPTNLQCIVPQEVTDLSKLSSTGTSV 93

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            ++G V+   AE+         IE+   K+  +  ++    P   + +           L
Sbjct: 94  MLEGTVVETPAESSEP------IEVKVDKVLFVGTSDASTYP-IAKTKLSLEFLRSMMHL 146

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            +R +T+      R  +  +         F+  +TP++T+S  EGA +    + +     
Sbjct: 147 RVRSNTIAAVTRIRNCLAAATHRFFQLHGFMYVNTPLITSSDCEGAGEMFQVTTL----- 201

Query: 192 YALPQAPQQYK 202
             L  A Q +K
Sbjct: 202 --LSTAEQLHK 210



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    EV+ Q   + G+        +       + 
Sbjct: 461 NDDGKTVAAMDILVPKVGELVGGSQREERLEVLEQRIKDSGLDT----ESYSWYLDLRRY 516

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G  PH G   G +R+V+   G +N+R+V  FP 
Sbjct: 517 GTVPHAGFGLGFERLVLFTTGIENIRDVIPFPR 549



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 56/188 (29%), Gaps = 33/188 (17%)

Query: 190 SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F++ P       Q +  + A      +   P FR E+  + R   EF+ ++ E++F + 
Sbjct: 286 DFFSKPAFLSVSGQLEAEVYACAMTSVYTFGPTFRAENSNTTRHLAEFWMIEPEIAFCDI 345

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRICYDDAIRR 285
              +   E  ++       +                            F R+ Y +AI  
Sbjct: 346 HGDMKCAEAYVQYCCRAVLDECMADMEFLGQHFDATAIKRLKVVANTPFRRLPYTEAIDI 405

Query: 286 YGTDKPDLRNPII------MHNVTEHFVHSEFRVFSKILSV---NPGYEVWAIPAKGGGG 336
                 + +          M   +EH  +    VF   + V       + + +     G 
Sbjct: 406 LLQHVAEGKKKFEVAVEWGMDLGSEHERYLSEEVFKGPIIVYDYPKDIKAFYMRLNDDGK 465

Query: 337 NRAFCDRM 344
             A  D +
Sbjct: 466 TVAAMDIL 473


>gi|307109029|gb|EFN57268.1| hypothetical protein CHLNCDRAFT_21495 [Chlorella variabilis]
          Length = 596

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 72/181 (39%), Gaps = 13/181 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVR--PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR---- 66
           G++ VG  +R+ GWV   R    G   FL++ D      +    D    +    +R    
Sbjct: 80  GLALVGRTIRIGGWVKTGREAGAGAFAFLEVNDGSCFQNIQIMVDKEVGDQVGGLRQLTP 139

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRF 126
           +   + I+G++ +    T        ++EL A K+  +   +    P+  +++  E +R 
Sbjct: 140 TSTCVLIEGVLAATPPGTK------QKVELKATKVVHVGSTDPAEYPLAKKKQSFEFLR- 192

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
               L  R +T+      R  +  +         F+   TPI+TAS  EGA +    + +
Sbjct: 193 DKAHLRPRTNTIGAVARIRNALAYATHRFFQERGFLYVHTPIVTASDCEGAGEMFQVTTL 252

Query: 187 N 187
            
Sbjct: 253 L 253



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 4/93 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+ +  +  G+        +       + 
Sbjct: 501 NDDGKTVAAMDVLVPKVGELVGGSQREERLDVLTRRIAESGMPM----EPYSAYLDLRKY 556

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G  PH G   G +R+++   G  N+REV  FP 
Sbjct: 557 GTVPHSGFGLGFERLILFATGLDNIREVIPFPR 589



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 29/83 (34%)

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
            A      Q      A      +   P FR E+  + R   EF+ ++ EM+F +  D + 
Sbjct: 331 PAYLTVSGQLNGEYYACALSNIYTFGPTFRAENSHTARHLAEFWMIEPEMAFCDLADDMQ 390

Query: 252 TMENVLRGVFEEFSNGNTVSNNF 274
             E+ +R       +       F
Sbjct: 391 CAEDYVRYCCRHLLDSCRPDLEF 413


>gi|226293463|gb|EEH48883.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 541

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/299 (18%), Positives = 97/299 (32%), Gaps = 46/299 (15%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDS----ACFEIA 62
           +  DL        V +       R     + FL +R      Q V +          +  
Sbjct: 90  NIADLSEELFEKEVTVVARADNARVQSAKLAFLMLRQQGKKVQAVVSASEEISRPMVKWI 149

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
                  ++ + G+V        +A +    +EL  +K+ ++S A  +      + E P 
Sbjct: 150 GGTNVNSIVQVTGIVKKAEIPVTSATLT--HLELHIRKVYMISQASHMLPMQVKDAERPP 207

Query: 123 ------------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
                               R   R LDL+ +T        + +       M+       
Sbjct: 208 PESATDEVDSEGVPCVTLKTRLDNRILDLQTETSQAITWISSGVAQLFTEYMLKSGSRWI 267

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
           STP LTA++ EG       +   + ++ A  Q+PQ YKQ+ +A      F          
Sbjct: 268 STPKLTANASEGGAGVFEVTYFKRKAYLA--QSPQLYKQMCIAGDMGSVF---------- 315

Query: 225 PRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
                   EF  LD E +F     ++L+  E++L  +  E           ++  Y  A
Sbjct: 316 --------EFIGLDFEKTFQSHYHEVLSFAEDLLVFILSELKKRFKKEIEVVQRSYPKA 366



 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 25/188 (13%)

Query: 384 TEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-F 440
            +   +RL   DG +    AG D  +   F  D    + ++LG I    ++  + ++D F
Sbjct: 373 KDGKALRLKYMDGVALLKEAGVDVSEQEKFENDLTTAMEKQLGRIIREKYDTDFYVLDKF 432

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P             A  PF             D     +  YD    G EI SG  R + 
Sbjct: 433 PM------------AVRPFYTKAC------PQDP--TFSNSYDFFMRGEEIMSGAQRIND 472

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           ++ +  A  + G+     +  F     AF+ G PPH G   G++RIVM  LG  N+R  +
Sbjct: 473 AKELEAAMVSKGLDPN--DEGFEDYIGAFRQGCPPHAGGGLGLNRIVMFFLGLPNIRLAT 530

Query: 561 LFPMSQNF 568
           LFP     
Sbjct: 531 LFPRDPQR 538


>gi|312217676|emb|CBX97623.1| similar to lysyl-trna synthetase [Leptosphaeria maculans]
          Length = 556

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 99/273 (36%), Gaps = 13/273 (4%)

Query: 18  GSFVRLSGWVHRVRP-HGGIIFLDI-RDHYGIT-QVVANPDSACFEIAKSVRSEWVLCID 74
              V + G V  VR     +IFLD+ RD   +   V     +   +  ++ +    +   
Sbjct: 98  NEVVSVLGRVRSVRTLSAKLIFLDVERDMQRLQVMVELKKLATPEDSLEAYKRFKKVARL 157

Query: 75  GLVMSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           G  +S           TGQ+ + A+++ ++L+        +    +  E++  +     L
Sbjct: 158 GDWISVQG--CPTKTSTGQLSILAREVPQVLAPCLHHIPEL---VDSAETLARRPHIHQL 212

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFY 192
                   +  R  I + +R   I   F+E  TP+   ++    AR F   +        
Sbjct: 213 TSHEPGDVLRLRAMIYDYIRMYFIQSGFLEVETPLFDVNAGGAIARPFETVANEMSNIPI 272

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  AP+   + L+  G D+ F++   FR+E   +   P EF   +         D++  
Sbjct: 273 KLRIAPELNLKRLIIGGQDKIFELGRSFRNEGVDNTHNP-EFSTCEFYEVGATLADVVAR 331

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            E ++ G+    +        F  +   + I  
Sbjct: 332 TEQLIHGL--HTATKALRPTYFPSLTAPEEIDF 362



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 2/86 (2%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF--GGLYRAFQCGMPPH 536
           A + +L  +  E  +     +      + F      +              A + GMPP 
Sbjct: 458 ASRVELFIHSREYVNAYEEENSPFEQRRKFIQQRGFQAEGHEGAIDESYLEALEWGMPPT 517

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLF 562
           GG   G+DR+VML    K + +V  F
Sbjct: 518 GGWGCGLDRLVMLFASKKRIADVLPF 543


>gi|7437594|pir||B71442 probable asparagine-tRNA ligase - Arabidopsis thaliana
 gi|2245089|emb|CAB10511.1| asparagine--tRNA ligase like protein [Arabidopsis thaliana]
 gi|7268482|emb|CAB78733.1| asparagine--tRNA ligase like protein [Arabidopsis thaliana]
          Length = 432

 Score =  112 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 68/177 (38%), Gaps = 5/177 (2%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
            D G+S VG  + + GWV  +R    + F++I D   ++ +     S   E    V S  
Sbjct: 101 ADEGLSRVGQSLNIMGWVRTLRSQSSVTFIEINDGSCLSNLQCVMTSDA-EGYDQVESGS 159

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           +L   G  +S     + +     ++EL  +KI ++   +        ++           
Sbjct: 160 IL--TGASVSVQGTIVASQGTKQKVELKVEKIIVVGECDSSYPIQ--KKRVSREFLRTKA 215

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            L  R +T       R  +  +         F+  ++PI+TAS  EGA +    + +
Sbjct: 216 HLRPRTNTFGAVARVRNTLAYATHKFFQESGFVWVASPIITASDCEGAGEQFCVTTL 272


>gi|225684069|gb|EEH22353.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 541

 Score =  112 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 55/299 (18%), Positives = 97/299 (32%), Gaps = 46/299 (15%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDS----ACFEIA 62
           +  DL        V +       R     + FL +R      Q V +          +  
Sbjct: 90  NIADLSEELFEKEVTVVARADNARVQSAKLAFLMLRQQGKKVQAVVSASEEISRPMVKWI 149

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
                  ++ + G+V        +A +    +EL  +K+ ++S A  +      + E P 
Sbjct: 150 GGTNVNSIVQVTGIVKKAEIPVTSATLT--HLELHIRKVYMISQASHMLPMQVKDAERPP 207

Query: 123 ------------------SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
                               R   R LDL+ +T        + +       M+       
Sbjct: 208 PESATDEVDSEGVPCVTLKTRLDNRILDLQTETSQAITWISSGVAQLFTEYMLKSGSRWI 267

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
           STP LTA++ EG       +   + ++ A  Q+PQ YKQ+ +A      F          
Sbjct: 268 STPKLTANASEGGAGVFEVTYFKRKAYLA--QSPQLYKQMCIAGDMGSVF---------- 315

Query: 225 PRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
                   EF  LD E +F     ++L+  E++L  +  E           ++  Y  A
Sbjct: 316 --------EFIGLDFEKTFQSHYHEVLSFAEDLLVFILSELKKRFKKEIEVVQRSYPKA 366



 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 73/188 (38%), Gaps = 25/188 (13%)

Query: 384 TEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-F 440
            +   +RL   DG +    AG D  +   F  D    + ++LG I    ++  + ++D F
Sbjct: 373 KDGKALRLKYMDGVALLKEAGVDVSEQEKFENDLTTAMEKQLGRIIREKYDTDFYVLDKF 432

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P             A  PF             D     +  YD    G EI SG  R + 
Sbjct: 433 PM------------AVRPFYTKAC------PQDP--TFSNSYDFFMRGEEIMSGAQRIND 472

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           ++ +  A    G+     +  F     AF+ G PPH G   G++RIVM  LG  N+R  +
Sbjct: 473 AKELEAAMVAKGLDPN--DEGFEDYIGAFRQGCPPHAGGGLGLNRIVMFFLGLPNIRLAT 530

Query: 561 LFPMSQNF 568
           LFP     
Sbjct: 531 LFPRDPQR 538


>gi|262041444|ref|ZP_06014647.1| lysine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259041238|gb|EEW42306.1| lysine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 312

 Score =  112 bits (279), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 75/206 (36%), Gaps = 22/206 (10%)

Query: 152 MRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF 210
           MR  M+A  F+E  TP++        AR F+          Y L  AP+ Y + L+  GF
Sbjct: 1   MRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGF 59

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
           +R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R + +       V
Sbjct: 60  ERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKTEV 118

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE----HFVHSEFRVFSKILSVNPGYEV 326
                          YG    D         + E    H   +         +     E 
Sbjct: 119 P--------------YGDQVFDFGKQFEKLTMREAIKKHRPETNMADLDNFDAAKALAES 164

Query: 327 WAI-PAKGGGGNRAFCDRMNEWARSQ 351
             I   K  G  R   +  +E A + 
Sbjct: 165 IGIQVEKSWGLGRIVTEIFDEVAEAH 190



 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +         P       + ND+      +++    G EI +G    + +E   Q F
Sbjct: 188 EAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRF 247

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +   +K   ++           A + G+PP  G+  GIDR+VML   +  +R+V LFP 
Sbjct: 248 QDQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPA 307

Query: 565 SQ 566
            +
Sbjct: 308 MR 309


>gi|218291276|ref|ZP_03495252.1| Aspartyl-tRNA synthetase-like protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218238824|gb|EED06036.1| Aspartyl-tRNA synthetase-like protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 132

 Score =  111 bits (277), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 30/88 (34%), Positives = 44/88 (50%)

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +    E  + +F     AF+ G  PH GIA G+D  +ML  GAK++ +V  FP 
Sbjct: 39  EDVCGALVFWPEEAQEKFVFFLNAFEYGTSPHVGIAFGLDSFIMLFTGAKSMCDVLAFPK 98

Query: 565 SQNFCDLLMGSPSTVSVEQLRELGLRIV 592
             +  D ++G+P  VS  QL  L LR+ 
Sbjct: 99  MASGTDFMVGAPIEVSEAQLEVLDLRVR 126


>gi|330936056|ref|XP_003305230.1| hypothetical protein PTT_18017 [Pyrenophora teres f. teres 0-1]
 gi|311317841|gb|EFQ86681.1| hypothetical protein PTT_18017 [Pyrenophora teres f. teres 0-1]
          Length = 555

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 88/246 (35%), Gaps = 13/246 (5%)

Query: 21  VRLSGWVHRVRP-HGGIIFLDIRDHYGITQVVANPDSACFE--IAKSVRSEWVLCIDGLV 77
           V + G V  VR     ++FLDI       QV+        +  + +S +    +   G  
Sbjct: 101 VSVFGRVRSVRLLSSKLMFLDIERDTQRLQVMVELKKLTPQKHLDESFKGFKKVARIGDW 160

Query: 78  MSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLD-LRR 135
           +S   +       TGQ+ + A  + ++L+                     +   +  L  
Sbjct: 161 ISIRGKP--TKTSTGQLSIIALDVPQVLAPCLHHLPEKID----DAETLARRPHIHALTS 214

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYAL 194
           D     +  R  I + +R   I   F+E  TP    ++    AR F   +     +   L
Sbjct: 215 DEPGDVLRLRALIYDYVRTYFIQSGFLEVETPTFDVNAGGAIARPFETVANELSNTPIRL 274

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+   + L+  G D+ F+I   FR+E   +   P EF   +          ++   E
Sbjct: 275 RIAPELNLKRLIIGGQDKIFEIGRVFRNEGVDNTHNP-EFSTCEFYEVGATLPTVIARTE 333

Query: 255 NVLRGV 260
            ++ G+
Sbjct: 334 QLVHGL 339



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 1/93 (1%)

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG-GLYRAF 529
                   A + +L  +G E  +     +      + F          E         A 
Sbjct: 450 DEATGQRVASRVELFIHGREYVNAYEEENSPFEQRRKFMQQLDFHTEGEGAIDESYLEAL 509

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           + GMPP GG   G+DR+VML    K + +V  F
Sbjct: 510 EWGMPPTGGWGCGLDRLVMLFASKKRIADVLPF 542


>gi|294940783|ref|XP_002782881.1| asparaginyl-tRNA synthetase, putative [Perkinsus marinus ATCC
           50983]
 gi|239895009|gb|EER14677.1| asparaginyl-tRNA synthetase, putative [Perkinsus marinus ATCC
           50983]
          Length = 376

 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 61/192 (31%), Gaps = 33/192 (17%)

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
            ++++      +   L  R + +      R+ +  ++    ++ +F    TP++T++  E
Sbjct: 9   AKKQHSREFLREIAHLRPRTNLIGAVARVRSSLSGAVHAFFMSRDFKYVHTPLITSADCE 68

Query: 176 GARDFLVPSRVNQG------------------------------SFYALP---QAPQQYK 202
           GA +    + + Q                                F+  P       Q  
Sbjct: 69  GAGEMFQVTSLLQKAEGAHQDVKIDSNTGRFDGYRFPAMFSYKQDFFGRPTYLTVSGQLN 128

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
               A      +   PCFR E+  + R   EF+ ++ E+ F +  D +   E  ++    
Sbjct: 129 VENYACALSDVYTFGPCFRAENSHTSRHLAEFWMIEPELCFADIHDNMKCAEEFIQHCAR 188

Query: 263 EFSNGNTVSNNF 274
                      F
Sbjct: 189 HVLAHCREDIAF 200



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 9/108 (8%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSN 510
              A   F M           D         D++     E+  G +R    +V+ +  S+
Sbjct: 277 YPAAIKAFYMRANEA----DEDESKQTVAAMDILAPLVGEVCGGSVREERLDVLDKKLSD 332

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
           + +     E+ +       + G  PH G   G +R++M++ G +N+R+
Sbjct: 333 LNM---DAEDYW-WYRDLRRFGSVPHAGFGIGFERLIMMMTGVENIRD 376


>gi|268325213|emb|CBH38801.1| aspartyl-tRNA synthetase, C-terminal part [uncultured archaeon]
          Length = 157

 Score =  110 bits (275), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 21/139 (15%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           E  +I D+P             A  PF      +E  KG+         +DL+    E++
Sbjct: 40  ELYFITDWP------------CAIKPFYAQPADVEGGKGD-----ICNAFDLMHPRLELS 82

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R H  E++ +     G+      + F     AF+ GMPPH G   G++R++M +L 
Sbjct: 83  SGSQRVHSYELLKRQIETKGLGA----DSFEFYLDAFRYGMPPHAGWGLGVERLLMSMLE 138

Query: 553 AKNVREVSLFPMSQNFCDL 571
             N+REV LFP  +     
Sbjct: 139 IDNIREVVLFPRDRRRLAP 157


>gi|302415325|ref|XP_003005494.1| asparaginyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261354910|gb|EEY17338.1| asparaginyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 506

 Score =  110 bits (275), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 81/475 (17%), Positives = 143/475 (30%), Gaps = 81/475 (17%)

Query: 112 LPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
            P+  + + PE +R     L  R       +  R+  +N++     + +F +   PI+T+
Sbjct: 96  YPIQKKYQTPEYLR-TIPHLRSRIPLNAAILRLRSDAVNALTRFFSSRDFTQTHPPIVTS 154

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           S  EG  +    S   + S       P++ +                   D   R  R  
Sbjct: 155 SDCEGGGEVFNVSVQTRESMA--DDTPEKKRG-------------TKNTTDTFFRGPRYL 199

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL--RICYDDAIRRYGTD 289
               QL +E                   + +   N  T+S  F   R      +  +   
Sbjct: 200 TVSTQLHLE------------------ALAQSVGNVWTLSPTFRAERSDTSRHMSEFYML 241

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
           + ++     M +V E        V + +       E+            A  D       
Sbjct: 242 EAEMPFVDEMDDVLELVEDMLREVTTDMYRDRAATELRERRVSSNASRTAEDD------- 294

Query: 350 SQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKF 409
                        L  +  V        H +      IR       GD+   +  +  +F
Sbjct: 295 -------------LVSADEVERRWAGMMHRSPARWPRIR------YGDAITLLQAEEHRF 335

Query: 410 CSFA-------ADARNHIAQELGIINCNC-FEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
                      ++   ++A  LG    N  ++  ++  +P      + K         + 
Sbjct: 336 EHKPTWEDGLHSEHEKYLATTLGSTGENGMYQPVFVTHYP-----RDIKAFYMRPTATSA 390

Query: 462 PQGG--MESLKGNDLLSIKAFQYDL-VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
              G   +   G +        +DL V +  EIA G +R H    + +A    G+     
Sbjct: 391 QTAGTKDDPYSGANERGATVDCFDLLVPDLCEIAGGSMREHRLADLQEAMQARGMVSSSG 450

Query: 519 ENRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
              F          + G  PHGG   G DR++  L G  N+R+V  FP     CD
Sbjct: 451 TPGFNGLDWYLDLRRWGSCPHGGFGLGFDRLLSYLAGVPNIRDVVAFPRWHGRCD 505


>gi|189197277|ref|XP_001934976.1| lysyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187980924|gb|EDU47550.1| lysyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 615

 Score =  110 bits (274), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 91/246 (36%), Gaps = 13/246 (5%)

Query: 21  VRLSGWVHRVRP-HGGIIFLDI-RDHYGIT-QVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           V + G V  VR     ++FLDI RD   +   V     +    + +S ++   +   G  
Sbjct: 161 VSVFGRVRSVRLLSSKLMFLDIERDTQRLQAMVELKKLTPQKNLDESFKNFKKVARIGDW 220

Query: 78  MSRSAETINANIITGQIELSAQKI-EILSVAEELPLPVFGEREYPESIRFKYRFLD-LRR 135
           +S   +      +TGQ+ + A  + ++L+                     +   +  L  
Sbjct: 221 ISIRGKP--TKTLTGQLSILALDVPQVLAPCLHHLPEKID----DAETLARRPHIHALTS 274

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYAL 194
           D     +  R  I + +R   I   F+E  TP    ++    AR F   +     +   L
Sbjct: 275 DEPGDVLRLRALIYDYVRTYFIQSGFLEVETPTFDVNAGGAIARPFETVANELSNTPIRL 334

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             AP+   + L+  G D+ F+I   FR+E   +   P EF   +          ++   E
Sbjct: 335 RIAPELNLKRLIIGGQDKIFEIGRVFRNEGVDNTHNP-EFSTCEFYEVGATLPTVVARTE 393

Query: 255 NVLRGV 260
            ++ G+
Sbjct: 394 QLVHGL 399



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 32/93 (34%), Gaps = 1/93 (1%)

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG-GLYRAF 529
                   A + +L  +G E  +     +      + F                    A 
Sbjct: 510 DEATGQRVASRVELFIHGREYVNAYEEENSPFEQRRKFMQQLDFHTEGGGAIDESYLEAL 569

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           + GMPP GG   G+DR+VML    K + +V  F
Sbjct: 570 EWGMPPTGGWGCGLDRLVMLFASKKRIADVLPF 602


>gi|297720863|ref|NP_001172794.1| Os02g0139600 [Oryza sativa Japonica Group]
 gi|255670590|dbj|BAH91523.1| Os02g0139600 [Oryza sativa Japonica Group]
          Length = 166

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 61/162 (37%), Gaps = 22/162 (13%)

Query: 410 CSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
                D      ++LG +    ++     DF          +   A  PF          
Sbjct: 27  VEAMGDLNTESEKKLGELVHTKYD----TDFYML------CRYPSAVRPFYTMPCSD--- 73

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
              D     +  +D+   G EI SG  R H+ EV+ +     GI    +         AF
Sbjct: 74  ---DPR--YSNSFDVFVRGEEIISGAQRVHVPEVLARQAEERGIDVGSI----AAYVDAF 124

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G PPHGG   G++R+VML  G  N+R+ SLFP      + 
Sbjct: 125 RYGAPPHGGFGVGLERVVMLFCGLGNIRKASLFPRDPRRLNP 166


>gi|289750187|ref|ZP_06509565.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|289690774|gb|EFD58203.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T92]
          Length = 274

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 4/139 (2%)

Query: 121 PESIRFKYRFLDLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSPEG-AR 178
               R + R+LDL  +   + ++  R+ ++ ++R  + A+ F+E  TPIL        AR
Sbjct: 2   DPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATAR 61

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            F+          + L  AP+ Y + L   G +R F++   FR+E       P EF  L+
Sbjct: 62  PFVTHINTYSMDLF-LRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNP-EFTLLE 119

Query: 239 MEMSFVEQDDILNTMENVL 257
              +  +  + ++    ++
Sbjct: 120 AYQAHADYLEWVDGCRELI 138


>gi|154322360|ref|XP_001560495.1| hypothetical protein BC1G_01327 [Botryotinia fuckeliana B05.10]
 gi|150850574|gb|EDN25767.1| hypothetical protein BC1G_01327 [Botryotinia fuckeliana B05.10]
          Length = 454

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 80/217 (36%), Gaps = 23/217 (10%)

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI---------------- 124
           S +  N  +  G++ L A   E+L +         G+ +  E +                
Sbjct: 59  STKVSNFELHLGKVYLVAAAPEMLGLGLGPASRAVGKLDEEEDLSEAAAGLSVTEGTPTA 118

Query: 125 ----RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
                     +  R          R  + +     + +  F +   P L  ++ EG  + 
Sbjct: 119 SLASHLNNPAMHKRAPVSQAIADIRIAVEDYFCDYLRSHRFKKFHPPCLIGAASEGGANV 178

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                 ++ ++ A  Q+PQ YKQ  +A G  R + + P FR E+  + R   EF  LD+E
Sbjct: 179 FRMPYFDKEAYLA--QSPQFYKQFEIAGGRKRVYCVGPVFRAENSNTPRHMTEFIGLDLE 236

Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
           M   E   ++L+ +E VL  +F   +         +R
Sbjct: 237 MEIDEHYHEVLHMLEGVLLFIFRNLAENYREEIELVR 273



 Score = 47.0 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 44/122 (36%), Gaps = 11/122 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF                      YD +  G EI SGG R H+ E + +   +
Sbjct: 343 KFPVDARPFYAMPD--------PENPAVTNAYDFMMRGQEILSGGQRLHLPEQLEEVIRS 394

Query: 511 VGISKEVVENRFGGLYRAFQ-CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            G+     +         F+  G+PPHGG   G+DR+V   L   +V  V  +P +    
Sbjct: 395 KGLDPN--QPGIKEYVDVFKSVGVPPHGGGGIGLDRVVAWYLNLPSVHLVCDYPRTPKRL 452

Query: 570 DL 571
             
Sbjct: 453 SP 454


>gi|241802229|ref|XP_002414521.1| aspartyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215508732|gb|EEC18186.1| aspartyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 397

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 86/270 (31%), Gaps = 70/270 (25%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L  S     + + GWV  +R H  ++FLD+ D                            
Sbjct: 33  LASSKPDEKIEVKGWVKALRKHKDVVFLDVSDGT-------------------------- 66

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
                                     A K++++  A+ +       + Y       +  L
Sbjct: 67  -------------------------VASKLQVVLPADNMRPR----KNYAPDYVRSFLHL 97

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--- 188
             R       +  R+  + ++     AE F    TP++T++  EG  D        +   
Sbjct: 98  RPRLSQEAALLRVRSAALVAVHSAFQAEGFFHVHTPVITSNDCEGGGDVFSVKAAEESKG 157

Query: 189 --------GSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
                     F+   A      Q      A    R + ++P FR E+  + R   EF  +
Sbjct: 158 TKEDAAAREHFFGGPAFLTVSGQLHLEAAAMSLSRVYTVSPTFRAENCNTRRHLCEFCMV 217

Query: 238 DMEMSFVEQDD-ILNTMENVLRGVFEEFSN 266
           + E +F++  D +++  E++++  F     
Sbjct: 218 EAEEAFLDSLDALMDRTESLVKRSFNHILG 247


>gi|15241897|ref|NP_200479.1| SYNC1; ATP binding / aminoacyl-tRNA ligase/ asparagine-tRNA ligase/
           aspartate-tRNA ligase/ nucleic acid binding / nucleotide
           binding [Arabidopsis thaliana]
 gi|20140329|sp|Q9SW96|SYNC1_ARATH RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic 1; AltName:
           Full=Asparagine--tRNA ligase 1; Short=AsnRS 1; AltName:
           Full=Protein EMBRYO DEFECTIVE 2755
 gi|5670315|gb|AAD46681.1|AF170909_1 SYNC1 protein [Arabidopsis thaliana]
 gi|10176772|dbj|BAB09886.1| SYNC1 protein [Arabidopsis thaliana]
 gi|133778862|gb|ABO38771.1| At5g56680 [Arabidopsis thaliana]
 gi|332009412|gb|AED96795.1| asparaginyl-tRNA synthetase, cytoplasmic 1 [Arabidopsis thaliana]
          Length = 572

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 7/176 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G    G  VR+ GWV   R  G     FL + D      +    D + ++++  V +   
Sbjct: 45  GAGLAGQTVRIGGWVKSGRDQGKRTFSFLAVNDGSCPANLQVMVDPSLYDVSNLVATGTC 104

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + +DG++               QIEL+  K+  +   +    P+   +   E++R     
Sbjct: 105 VTVDGVLKVPPKG----KGTQQQIELNVVKVIDVGTVDASKYPLPKTKLTLETLR-DVLH 159

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           L  R +++      R  +  +        +F+   TPI+T S  EGA +    + +
Sbjct: 160 LRSRTNSISAVARIRNALAFATHSFFQEHSFLYIHTPIITTSDCEGAGEMFQATTL 215



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+ +    +G+  E  E          + 
Sbjct: 477 NDDEKTVAAMDVLVPKVGELIGGSQREERYDVIKKRIEEMGLPIEPYE----WYLDLRRY 532

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   H G   G +R+++   G  N+R+V  FP      DL
Sbjct: 533 GTVKHCGFGLGFERMILFATGLDNIRDVIPFPRYPGKADL 572



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 51/160 (31%), Gaps = 29/160 (18%)

Query: 190 SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+   A      Q +    A      +   P FR E+  + R   EF+ ++ E++F + 
Sbjct: 303 DFFGRQAFLTVSGQLQVETYACALSNVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFADL 362

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRICYDDAIRR 285
           +D +N  E  ++ +                                  F RI Y  AI  
Sbjct: 363 EDDMNCAEAYVKYMCNWLLEKCYADMELMAKNFDSGCIDRLKLVASTPFGRITYTKAIEL 422

Query: 286 YGTDKP---DLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
                    +  N +   +   +EH  +    +F K L V
Sbjct: 423 LEEAVAKGKEFDNNVEWGIDLASEHERYLTEVLFQKPLIV 462


>gi|308483892|ref|XP_003104147.1| CRE-NARS-2 protein [Caenorhabditis remanei]
 gi|308258455|gb|EFP02408.1| CRE-NARS-2 protein [Caenorhabditis remanei]
          Length = 444

 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 119/345 (34%), Gaps = 43/345 (12%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHY--GITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            L GW   V+  G  +F+ + +    G+ Q+VAN      +IA+ V+    +   G    
Sbjct: 13  TLDGWAKSVQKSGKNVFVKVDNGRSRGLIQLVANK-----QIAQEVKVGNAIRAIGSFEK 67

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLH 139
                        + E  A ++ I+   E          +       K   L  R     
Sbjct: 68  SPGSQ-------QETEFVADQLNIIGRDENPRY-----EDLSADNLRKKTHLRARNSQFA 115

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----------QG 189
             +  R+ +        ++ +FI   TP LT +  EG  +       +          + 
Sbjct: 116 SFLRARSALFRETHEFFMSRDFIHIDTPKLTRNDCEGGGEVFDVVTTSAESLNGSEGIKE 175

Query: 190 SFYALPQAPQQYKQLLM----ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               L  + Q + + ++     +   R + + P FR E  +S     EFY L++E++FV+
Sbjct: 176 DAMYLSVSSQLHLEAMVRYELINRLQRVYTLGPAFRAEKQQSHAHLSEFYMLEVEVAFVD 235

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN---V 302
              + +    ++   F+      ++        Y   +  +    P LR  + + N   +
Sbjct: 236 VI-LFSLFSTIIILYFQNIEEMCSLVE-----SYVQNMFSF-LHSPKLRTELEIMNSQHL 288

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
               ++S F   +   +V       +  +   G ++     + ++
Sbjct: 289 ASIPLNSPFSRITYEDAVKVLTSDGSNVSAKSGLSKKNELDLVKF 333



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 67/190 (35%), Gaps = 38/190 (20%)

Query: 376 AKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFC 435
           ++HL  +   +   R+  +D        G  +   S  +        EL ++  +  +  
Sbjct: 285 SQHLASIPLNSPFSRITYEDAVKVLTSDGSNVSAKSGLSK-----KNELDLVKFHDNQPV 339

Query: 436 WIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASG 494
           ++  +P                PF M +   ++         K   +DL+  G  E+A G
Sbjct: 340 FVTHYP------------KNQKPFYMARTQDDT---------KTLSFDLLVPGVGELAGG 378

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +R   +E + +    +                  + G PP  G   G +R++  LLG +
Sbjct: 379 SVREPDAEKLKERGCGIE-----------WYLETRKRGQPPTAGFGIGFERLLQYLLGIQ 427

Query: 555 NVREVSLFPM 564
           N+++   FP 
Sbjct: 428 NIKDTLAFPR 437


>gi|297793179|ref|XP_002864474.1| EMB2755 [Arabidopsis lyrata subsp. lyrata]
 gi|297310309|gb|EFH40733.1| EMB2755 [Arabidopsis lyrata subsp. lyrata]
          Length = 572

 Score =  109 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 7/176 (3%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G    G  +R+ GWV   R  G     FL++ D      +    DS+ ++++K V +   
Sbjct: 45  GAKLAGQKIRIGGWVKTGREQGKGAFAFLEVNDGSCPANLQVMVDSSLYDLSKLVATGTC 104

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + +DG V+    E         +IELS  K+  + + +    P+   +   E +R     
Sbjct: 105 VTVDG-VLKVPPEGKGTK---QRIELSVVKVIDVGIVDATKYPLPKTKLTLEFLR-DVLH 159

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           L  R +++      R  +  +        +F+   TPI+T S  EGA +    + +
Sbjct: 160 LRSRTNSISAVARIRNALAFATHSFFQEHSFLYIHTPIITTSDCEGAGEMFQATTL 215



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+ +    +G+  E  E          + 
Sbjct: 477 NDDEKTVAAMDVLVPKVGELIGGSQREERYDVIKKRIEEMGLPIEPYE----WYLDLRRY 532

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   H G   G +R+++   G  N+R+V  FP      DL
Sbjct: 533 GTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGKADL 572



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 54/160 (33%), Gaps = 29/160 (18%)

Query: 190 SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+   A      Q +    A      +   P FR E+  + R   EF+ ++ E++F + 
Sbjct: 303 DFFGRQAFLTVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFADL 362

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRICYDDAIRR 285
           +D +N  E  ++ + +   +                            F RI Y +AI  
Sbjct: 363 EDDMNCAEAYVKYMCKWLLDKCRDDMELMAKNFDSGCIDRLELVESTPFGRITYTEAIEL 422

Query: 286 YGTDKP---DLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
                    +  N +   +   +EH  +    +F K L V
Sbjct: 423 LEEAVAKGKEFDNKVEWGIDLASEHERYLTEVLFQKPLIV 462


>gi|239791673|dbj|BAH72272.1| ACYPI007430 [Acyrthosiphon pisum]
          Length = 279

 Score =  108 bits (270), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                 + +  YD+   G EI SG  R H  + +++   +
Sbjct: 171 KFPLAIRPFYTMPDPD--------SKVASNSYDMFMRGEEILSGAQRIHDFDYLIERAKH 222

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             +       +      AF+ G PPH G   G++R+VML LG  N+R+VS+FP       
Sbjct: 223 HQVDI----EKIAAYIDAFRYGCPPHAGGGIGLERVVMLYLGLDNIRKVSMFPRDPKRLT 278

Query: 571 L 571
            
Sbjct: 279 P 279



 Score = 92.1 bits (227), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 7/147 (4%)

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           +  ++ EG  +    S     ++ A  Q+PQ YKQ+ +A  FDR F I   FR ED  + 
Sbjct: 1   MINAASEGGANVFTISYFKGSAYLA--QSPQLYKQMAIAGDFDRVFTIGAVFRAEDSNTY 58

Query: 229 RLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
           R   EF  LD+EM+F     ++++ + ++   +F+   +          IC    +  + 
Sbjct: 59  RHLTEFVGLDLEMAFKYHYHEVVDVIGSLFTNIFKGLRDNYQSEIKT--ICEQYPVEPFK 116

Query: 288 TDKP--DLRNPIIMHNVTEHFVHSEFR 312
              P   L  P  ++ + E  V     
Sbjct: 117 FLDPPLKLEFPTAVNMLREAGVEMGDE 143


>gi|326498091|dbj|BAJ94908.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 566

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 71/184 (38%), Gaps = 9/184 (4%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFE 60
           R R  +  D G +  G  V + GWV   R  G     FL++ D      +    D     
Sbjct: 33  RTRIRAILDAGDAMAGERVVVGGWVKTGRQQGKGEFAFLEVNDGSCQGNLQVMVDKDVHP 92

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +A+   +   + ++G++     E         +IEL  +++  L   +    P+   +  
Sbjct: 93  LAQLTHTGTSVLVEGVLKKPPQE------AKQRIELKVERVIELGEVDAAAYPLPKTKIT 146

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
            E++R  +  L  R +T+      R ++  +         F+   TPI+T S  EGA + 
Sbjct: 147 LETLR-DFVHLRARTNTIGAIARIRHQLAYATHSFFDENGFLYIHTPIITTSDCEGAGEM 205

Query: 181 LVPS 184
              +
Sbjct: 206 FQVT 209



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 50/161 (31%), Gaps = 26/161 (16%)

Query: 186 VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  F+   A      Q +    A      +   P FR E+  + R   EF+ ++ E++
Sbjct: 296 AFENDFFKRQAFLTVSGQLQVETYACALSNVYTFGPTFRAENSHTSRHLAEFWMVEPEIA 355

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRICYDD 281
           F    D +N  E  ++ + +                                F RI Y  
Sbjct: 356 FANLQDDMNCAEKYVQYLCKWLLKHCREDMEFMVKHVDKAAIERLELVSSTPFERISYTK 415

Query: 282 AIRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
           A+           N +   +   +EH  +    +F K + V
Sbjct: 416 AVEILEGVDKKFENKVEWGIDLASEHERYLTEVIFKKPVIV 456



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +++ Q   +  +  E  E          + 
Sbjct: 471 NDDQKTVAAMDVLVPKVGELIGGSQREERLDILTQRILDADLPLEPYE----WYLDLRRF 526

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   H G   G +R+++   G +N+R+V  FP      DL
Sbjct: 527 GSVKHSGFGLGFERMILFATGLENIRDVIPFPRYPGRADL 566


>gi|207743625|ref|YP_002260017.1| lysyl-trna synthetase (partial sequence) protein [Ralstonia
           solanacearum IPO1609]
 gi|206595024|emb|CAQ61951.1| probable lysyl-trna synthetase (partial sequence) protein
           [Ralstonia solanacearum IPO1609]
          Length = 234

 Score =  108 bits (269), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   E +  +        P       + +D  +    +++L   G EIA+G    +  
Sbjct: 104 LFEETAESQLWEPT-FIIDYPVEVSPLARASDTRASITERFELFITGREIANGFSELNDP 162

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   + F      K+  +           RA + GMPP GG   GIDR+VMLL  + N+R
Sbjct: 163 EDQAERFRKQVEQKDAGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIR 222

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 223 DVILFP 228


>gi|159470225|ref|XP_001693260.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158277518|gb|EDP03286.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 535

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 68/171 (39%), Gaps = 9/171 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVR--PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           GVS VG  +R+ GWV   R    G   FL++ D      +          +   V +   
Sbjct: 10  GVSQVGQTLRVGGWVKTGREAGAGAFCFLEVNDGSMFDSLQVMVSKEVGGLKTLVPTGTS 69

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G + +    T  A      +EL A KI  +  ++    P+  ++   E +R K   
Sbjct: 70  VLVEGHLEATPEGTKQA------VELKATKIVHVGPSDAATYPIAKKKTTYEFLREKM-H 122

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           L  R +T+      R  +  +         F+   TPI+TAS  EGA +  
Sbjct: 123 LRPRSNTISAVARIRNALAFATHRFFQENGFLYVHTPIITASDCEGAGEMF 173



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 4/93 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+ +     G+     E    G     + 
Sbjct: 440 NDDNKTVAAMDVLVPKVGELIGGSQREDRLDVLERRLGESGMDLAAYE----GYLDLRRY 495

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G  PH G   G +R+++   G  N+REV  FP 
Sbjct: 496 GTVPHSGFGLGFERLILFATGLDNIREVIPFPR 528



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 52/164 (31%), Gaps = 30/164 (18%)

Query: 187 NQGSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            +  F++ P       Q +    A      +   P FR E   + R   EF+ ++ EM+F
Sbjct: 262 YKEDFFSKPAFLTVSGQLQGEFYACALSNIYTFGPTFRAEYSFTARHLAEFWMIEPEMAF 321

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRICYDDA 282
            +  D +   E+ +R   +                                F RI Y +A
Sbjct: 322 CDLKDDMQCAEDYVRYCCKFLLENCKPDLEFINKMVDNTALARLEQVASTPFKRISYTEA 381

Query: 283 IRRY------GTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
           I         G    + +    +   TEH  +    +F + + V
Sbjct: 382 IDLLLGVVAEGKKSFEFKVEWGIDLSTEHERYLTEEIFKQPVIV 425


>gi|242060462|ref|XP_002451520.1| hypothetical protein SORBIDRAFT_04g003180 [Sorghum bicolor]
 gi|241931351|gb|EES04496.1| hypothetical protein SORBIDRAFT_04g003180 [Sorghum bicolor]
          Length = 307

 Score =  107 bits (268), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 73/207 (35%), Gaps = 25/207 (12%)

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
                 +  + +       + +R  L M   D    +  +         D      ++LG
Sbjct: 125 DKCGKELEAIHRQYPFQPLKYLRTTLRMDY-DEGIRMLQEAGVHVDAMGDLNTEAEKKLG 183

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDL 484
            +  + +      +F          +   A  PF TMP                +  +D+
Sbjct: 184 DLVRDRYG----TEFYML------CRYPSAVRPFYTMPCPEDPRY---------SCSFDV 224

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
              G EI SG  R H+ +++    +  GI    +         AF+ G PPHGG   G++
Sbjct: 225 FVRGEEIISGAQRVHVPDLLAAQAAARGIDVASI----ATYVDAFRYGAPPHGGFGVGLE 280

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCDL 571
           R+VML  G  N+R+ SLFP        
Sbjct: 281 RVVMLFCGLGNIRKTSLFPRDPRRLAP 307



 Score =  100 bits (249), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 3/123 (2%)

Query: 147 RIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
            +  + +       F+   TP L   S EG           Q +   L Q+PQ +KQ+ +
Sbjct: 7   AVAWAAKRSYYFTGFVGIHTPKLIGGSSEGGAAVFKLDYNGQAA--CLAQSPQLHKQMAV 64

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD-DILNTMENVLRGVFEEFS 265
             GF R F++ P FR ED  + R   EF  LD+EM+  +   ++ + ++ +   +F+  +
Sbjct: 65  CGGFGRVFEVGPVFRAEDSDTHRHLCEFVGLDVEMALRDHYTEVCDVVDRLFVAMFDHLN 124

Query: 266 NGN 268
           +  
Sbjct: 125 DKC 127


>gi|308809193|ref|XP_003081906.1| putative lysyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116060373|emb|CAL55709.1| putative lysyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 349

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 75/191 (39%), Gaps = 14/191 (7%)

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           I+++R  +  + F+E  TP+L  S+               G    L  A + + + L+  
Sbjct: 2   ISTIRRMLDDQGFMEFETPVLHDSAGGADAKPFNTFHNALGMQLTLRIATELHLKRLVVG 61

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           GF+R ++I   FR+E   +   P EF  +++  ++ +  D+L   E ++     +     
Sbjct: 62  GFERVYEIGRIFRNEGLSTRHNP-EFTSIEVYQAYADVTDMLELTEEMICQCAMKACGTL 120

Query: 269 TVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWA 328
           T+      I            +P  R P  M+++ +     +   F   L    G +  A
Sbjct: 121 TIPYGDHTIDLSK--------RPWRRAP--MNDLVKEATGVDVMSFGDDLD---GAKAAA 167

Query: 329 IPAKGGGGNRA 339
           IPA      +A
Sbjct: 168 IPALKAHSKKA 178



 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 31/153 (20%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            +E   E   I       +P  +                   +++L   G E+A+     
Sbjct: 198 MFEATCESGLIQPTFVLDHPVEISPLAKPHRDKP----GVTERFELFVVGRELANSFSEL 253

Query: 499 HMS-------EVMLQAFSNVGISKEVV------------ENRFG-----GLYRAFQCGMP 534
                     E  +++ +    ++               +  +          A + GMP
Sbjct: 254 TDPIDQRGRLEKQIESHAKTSAAQREAAAGDKDVLKELDDESYDVELDEDFLTALEYGMP 313

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           P  G+  GIDR+VMLL  + ++R+V  FP+ + 
Sbjct: 314 PTAGMGLGIDRLVMLLTNSPSIRDVIAFPLLKK 346


>gi|308809425|ref|XP_003082022.1| asparaginyl-tRNA synthetase 1, cytoplasmic / asparagine-tRNA ligase
           1 (ISS) [Ostreococcus tauri]
 gi|116060489|emb|CAL55825.1| asparaginyl-tRNA synthetase 1, cytoplasmic / asparagine-tRNA ligase
           1 (ISS) [Ostreococcus tauri]
          Length = 560

 Score =  107 bits (267), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 70/177 (39%), Gaps = 10/177 (5%)

Query: 14  VSDVGSFVRLSGWVHRVRPH--GGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
            + VG  + + GWV   R    G ++F+ + D  G   +     S  + ++    +   +
Sbjct: 37  ATLVGKTIVVGGWVKTGREAERGTLLFIALNDGSGPGNLQCVVRSETYALSDLKTTGTSV 96

Query: 72  CIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
            ++G +             TGQ IEL A ++ +    +    P+  +++  E +R K   
Sbjct: 97  VLEGELREPPES------ATGQTIELHATRVLMCGTCDGATYPIAKKKQTLEYLREKI-H 149

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           L  R +T+      R+ +  +         F+   TP +T S  EGA +    + + 
Sbjct: 150 LRPRTNTIASVARVRSALAFATHSFFNQNGFLYVHTPCITQSDCEGAGEMFQVTTML 206



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 10/147 (6%)

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT---MPQGGMES---LKGNDLLSIKAFQY 482
            +  EF + + +      E E+ +  +H                  ++ ND     A   
Sbjct: 416 ADGHEFVFPVSWGIDLATEHERWLAESHFKKPVIVYNYPKDIKAFYMRLNDDNKTVAAMD 475

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
            LV    E+  G  R    +V+ +     G+        +       + G   H G   G
Sbjct: 476 VLVPRVGELIGGSQREERLDVLERRMKESGLDP----EDYSWYLDLRRFGTVTHSGFGLG 531

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +R+++L  G  N+R+V  +P   N C
Sbjct: 532 FERLILLCTGMDNIRDVIPYPRWPNNC 558



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 3/89 (3%)

Query: 189 GSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             F+          Q +    A      +   P FR E+  + R   EF+ ++ E++F +
Sbjct: 290 EDFFGGKSFLTVSGQLQVETYACALSNVYTFGPTFRAENSNTTRHLAEFWMIEPELAFAD 349

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNF 274
             D +   E+ ++               F
Sbjct: 350 LQDDMQCAEDYVKFCCNYLLEHCLGDLEF 378


>gi|217033561|ref|ZP_03438990.1| hypothetical protein HP9810_905g80 [Helicobacter pylori 98-10]
 gi|216944086|gb|EEC23517.1| hypothetical protein HP9810_905g80 [Helicobacter pylori 98-10]
          Length = 117

 Score =  107 bits (266), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/114 (33%), Positives = 67/114 (58%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  G+ Q+V +P S  +E A  
Sbjct: 2   RSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYERALE 61

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
           VRSE+VL   G    R     N  + TG+IE+  +++ I + +   P+ +  ++
Sbjct: 62  VRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEIGNKK 115


>gi|125525972|gb|EAY74086.1| hypothetical protein OsI_01974 [Oryza sativa Indica Group]
          Length = 559

 Score =  107 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 66/177 (37%), Gaps = 9/177 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G +  G  V + GWV   R  G     FL++ D    + +    D+A   +A    +   
Sbjct: 35  GAARAGERVVVGGWVKTGREQGKGTFAFLELNDGSCASNLQVLVDAAVHPLAPLTATGTS 94

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G +               ++EL   ++  +   +    P+   +   E++R     
Sbjct: 95  VLVEGELKKPPEG------AKQRVELRVDRVIEVGEVDPAAYPLPKTKLTLENLR-DVVH 147

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           L  R +T+      R ++  +         F+   TPI+T S  EGA +    + + 
Sbjct: 148 LRSRTNTIGAVARIRHQLACATHRFFDENGFLYVHTPIITTSDCEGAGEMFQVTTLF 204



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 50/162 (30%), Gaps = 27/162 (16%)

Query: 186 VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  F+   A      Q +    A      +   P FR E+  + R   EF+ ++ E++
Sbjct: 288 AYENDFFKRQAFLTVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIA 347

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRICYDD 281
           F    D +N  E  ++ + +                                F RI Y  
Sbjct: 348 FANLQDDMNCAERYVQYLCKWLLEHCREDMEFMVKNYDKTAIERLELVSSTPFQRISYTK 407

Query: 282 AIRRYGTD-KPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
           A+            N +   +   +EH  +    +F K + V
Sbjct: 408 AVELLKNVTDKKFENKVEWGIDLASEHERYLTEVIFKKPVIV 449



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +++     + G+  E  E          + 
Sbjct: 464 NDDQKTVAAMDVLVPKVGELVGGSQREERLDLLKTRIQDAGLPLEPYE----WYLDLRRF 519

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   H G   G +R+++   G +N+R+V  FP      DL
Sbjct: 520 GSVKHSGFGLGFERMILFATGLENIRDVIPFPRYPGRADL 559


>gi|115436616|ref|NP_001043066.1| Os01g0372700 [Oryza sativa Japonica Group]
 gi|14587206|dbj|BAB61140.1| putative asparagine-tRNA ligase [Oryza sativa Japonica Group]
 gi|15408636|dbj|BAB64053.1| putative asparagine-tRNA ligase [Oryza sativa Japonica Group]
 gi|113532597|dbj|BAF04980.1| Os01g0372700 [Oryza sativa Japonica Group]
          Length = 559

 Score =  107 bits (266), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 66/177 (37%), Gaps = 9/177 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G +  G  V + GWV   R  G     FL++ D    + +    D+A   +A    +   
Sbjct: 35  GAARAGERVVVGGWVKTGREQGKGTFAFLELNDGSCASNLQVLVDAAVHPLAPLTATGTS 94

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G +               ++EL   ++  +   +    P+   +   E++R     
Sbjct: 95  VLVEGELKKPPEG------AKQRVELRVDRVIEVGEVDPAAYPLPKTKLTLENLR-DVVH 147

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           L  R +T+      R ++  +         F+   TPI+T S  EGA +    + + 
Sbjct: 148 LRSRTNTIGAVARIRHQLACATHRFFDENGFLYVHTPIITTSDCEGAGEMFQVTTLF 204



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 50/162 (30%), Gaps = 27/162 (16%)

Query: 186 VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  F+   A      Q +    A      +   P FR E+  + R   EF+ ++ E++
Sbjct: 288 AYENDFFKRQAFLTVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIA 347

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRICYDD 281
           F    D +N  E  ++ + +                                F RI Y  
Sbjct: 348 FANLQDDMNCAERYVQYLCKWLLEHCREDMEFMVKNYDKTAIERLELVSSTPFQRISYTK 407

Query: 282 AIRRYGTD-KPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
           A+            N +   +   +EH  +    +F K + V
Sbjct: 408 AVELLKNVTDKKFENKVEWGIDLASEHERYLTEVIFKKPVIV 449



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +++     + G+  E  E          + 
Sbjct: 464 NDDQKTVAAMDVLVPKVGELVGGSQREERLDLLKTRIQDAGLPLEPYE----WYLDLRRF 519

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   H G   G +R+++   G +N+R+V  FP      DL
Sbjct: 520 GSVKHSGFGLGFERMILFATGLENIRDVIPFPRYPGRADL 559


>gi|298204640|emb|CBI23915.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score =  107 bits (266), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 5/145 (3%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
             + +         +  +         F+   TPI+T S  EGA +           F+A
Sbjct: 231 ITNMIPAVARICNALAYATHTFFQNHGFLHAHTPIITTSDCEGAGEMFQIDY--SQDFFA 288

Query: 194 LP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
                    Q +    A      +   P FR E   + R   EF+ ++ E++F +  D +
Sbjct: 289 RQAFFTVSGQLQVETYACAIGSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADLKDDM 348

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFL 275
           N  E  ++ + +   +       F+
Sbjct: 349 NCAEAYVKFLCQWLPDNCIDDMEFM 373


>gi|167947823|ref|ZP_02534897.1| aspartyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 128

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/93 (31%), Positives = 47/93 (50%)

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG 488
              +   W+++FP +EW++   +    H+PFT P+     L  +D    K+  YD+V NG
Sbjct: 2   EEGWRPLWVVEFPMFEWDDNHDRWTPLHHPFTSPKLDQLELLESDPGGCKSRAYDMVLNG 61

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
            E+  G IR H+ EV  + F  + IS E  +  
Sbjct: 62  VELGGGSIRIHLQEVQQKMFKLLEISDEEADRE 94


>gi|303283380|ref|XP_003060981.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457332|gb|EEH54631.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 645

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 72/179 (40%), Gaps = 8/179 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWV 70
           GVS +G  V L GWV  VR    + F+++ D   +   Q V   D+   E+         
Sbjct: 103 GVSRIGDAVELRGWVRTVRAQKDLSFVEVNDGSSLSGIQAVVTADATGAELL-----ADG 157

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
               G  +      + +      +E+ A  +E++  A+    P+  +R   E +R     
Sbjct: 158 AITTGAAVVVHGVVVESPGGKQAVEVKATAVELVGGADASTFPLQKKRHTLEFLRG-IAH 216

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           L  R +T+      R ++  +      +  F   +TPI+TAS  EGA +    + +  G
Sbjct: 217 LRPRTNTIGAVTRVRNQLAYATHTFFQSHGFQYVNTPIITASDCEGAGEQFQITTLLNG 275



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 51/184 (27%), Gaps = 27/184 (14%)

Query: 190 SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+  P       Q    + A      +   P FR E+  + R   EF+ ++ E++F + 
Sbjct: 377 DFFGKPSYMTVSGQLNAEIYACAMRDVYTFGPTFRAENSNTSRHLAEFWMVEPELAFSDL 436

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS----------------------NNFLRICYDDAIR 284
            D ++  E  L+                                     F RI Y +A+ 
Sbjct: 437 QDDMDCAEAYLKHCISHVLEHCDEDLEFFEKNVSKDNLRERLRGVATTPFARITYTEAVE 496

Query: 285 RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
              + K     P+     ++     E  +  ++    P               R   D  
Sbjct: 497 HVLSAKKKFEFPVEWG--SDLQSEHERYICEEVYKDVPVIVRDYPKGVKAFYMRENDDGK 554

Query: 345 NEWA 348
              A
Sbjct: 555 TVAA 558



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    LV    E+  G  R    +V+ +    VG+ K      +      
Sbjct: 547 MRENDDGKTVAAMDVLVPKVGELMGGSQREERLDVLERRIEEVGLEK----ESYWWYLDL 602

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            + G  PH G   G +R+V  + G +N+R+   FP 
Sbjct: 603 RRYGSVPHAGFGLGFERLVQYVTGVENIRDAIPFPR 638


>gi|154278289|ref|XP_001539960.1| hypothetical protein HCAG_05427 [Ajellomyces capsulatus NAm1]
 gi|150413545|gb|EDN08928.1| hypothetical protein HCAG_05427 [Ajellomyces capsulatus NAm1]
          Length = 523

 Score =  106 bits (265), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 94/272 (34%), Gaps = 62/272 (22%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
            S     +R+ G++  VR      F +I D   I  V A       E A  + +   + I
Sbjct: 54  SSLDNRQIRVRGFIRSVRKQKRFAFAEISDGSTIKSVQA---ILTPEQAARLSTGSAVDI 110

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G+          ++      EL A +++I    +                         
Sbjct: 111 SGVWQPCPPGKEQSH------ELHATEVKITGETDP------------------------ 140

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ----- 188
                             +    +   F++   P++T+S  EGA +       ++     
Sbjct: 141 -----------------EVFRFQLGGCFVQVQPPLITSSDCEGAGEVFTVVPGDKVGGAE 183

Query: 189 -GSFYALPQ----APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              F+  P+    + Q + +   A+     + ++P FR E   + R   EFY L++EM+F
Sbjct: 184 VEEFFRSPKYLTVSSQLHLE-AYAAELGNVWALSPTFRAEKSDTPRHLSEFYMLEVEMNF 242

Query: 244 VEQDD-ILNTMENVLRGVFEEFSNGNTVSNNF 274
           V+  D + + +E+++R + +           F
Sbjct: 243 VQSVDSLTDIVESLIRDLTKRLYETPVAEEIF 274



 Score = 57.4 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 21/52 (40%)

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +  +             + G  PHGG   G DR +  L G  ++R+V  FP 
Sbjct: 465 LQPDEHLGSIQWYADLRRWGSAPHGGFGLGFDRYLGYLAGVSSLRDVVPFPR 516


>gi|164662915|ref|XP_001732579.1| hypothetical protein MGL_0354 [Malassezia globosa CBS 7966]
 gi|159106482|gb|EDP45365.1| hypothetical protein MGL_0354 [Malassezia globosa CBS 7966]
          Length = 534

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 103/325 (31%), Gaps = 49/325 (15%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           S V   GW+  VR H    FL++ D        A          + +     + + G + 
Sbjct: 56  SDVTAYGWIVSVRRHKTRTFLELTDGT--MGGGATMQVVLSGDIRELTPGQAIQLHGQMK 113

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLP----VFGERE-----------YPES 123
           +    +      + ++E+ A  + +L+  +    P    + G                  
Sbjct: 114 AGRGRS-----ASQRVEIQADHVAVLAPTDLATYPLANMMQGNHAASAAADALTHTTATD 168

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL-- 181
           I  +      R          R R+ ++M   M A +F +   PI+T+S  EG  +    
Sbjct: 169 IVRRESHFKARTPQFAALQRTRARMEHAMGAWMAANDFCKVHPPIITSSDCEGGGEIFQV 228

Query: 182 ----------------VPSRVNQGSFY-----ALPQAPQQYKQLLMASGFDRYFQIAPCF 220
                             SR    + +     A      Q      A G  R + + P F
Sbjct: 229 VADADVPQNSQETMSLTSSRNGSLAAFWSGQPAYLTVSAQLHLEAYALGLSRVWSLCPVF 288

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           R E   ++R   EF+ L+ E+ ++ + +  L  + +V   V +             R   
Sbjct: 289 RAEGSATNRHLAEFWMLEAELCWLPDGEQALRMVLDVTESVLKSALQAAWHDE---RAKE 345

Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTE 304
           D A      D   + +P      T+
Sbjct: 346 DMAFLGATYDAALINSPWPRLTYTD 370



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 53/142 (37%), Gaps = 23/142 (16%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ-------YDLV 485
           +  ++ +FP                PF M +     +  +D+   ++         +DL+
Sbjct: 403 QPVFVTNFP------------TEIKPFYMREDPEPVILSDDVHPTESGSARKTVACFDLL 450

Query: 486 CNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGID 544
                E+  G +R     V++Q     G+    +      L    + G  PHGG   G++
Sbjct: 451 VPQVGELVGGSVREERHGVLMQRLRTSGLQASSLTWYTDDLR---RYGGAPHGGFGLGME 507

Query: 545 RIVMLLLGAKNVREVSLFPMSQ 566
           R +  +    +VR++  FP  +
Sbjct: 508 RFLSWVTHTFHVRDLVGFPRVK 529


>gi|242033185|ref|XP_002463987.1| hypothetical protein SORBIDRAFT_01g010060 [Sorghum bicolor]
 gi|241917841|gb|EER90985.1| hypothetical protein SORBIDRAFT_01g010060 [Sorghum bicolor]
          Length = 561

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 63/178 (35%), Gaps = 9/178 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G +  G  V + GWV   R  G     FL++ D      +    D+A   +A+   +   
Sbjct: 35  GTARAGDRVVVGGWVRTGREQGKGSFAFLELSDGSCAATLQVIVDAAVHPLARLTATGTS 94

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           + ++G +      T         +EL   ++  +   +    P   G+ +          
Sbjct: 95  VLVEGDIKEPPEGTK------QNVELKVSRVLEVGEVDAAVYPLPKGKVKLTLEKLRDVV 148

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            L  R +T+      R ++  +         F+   TPI+T S  EGA +    + + 
Sbjct: 149 HLRSRTNTIGAVARIRHQLAYASHTFFDENGFLYVHTPIITTSDCEGAGEMFQVTTLF 206



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 52/162 (32%), Gaps = 27/162 (16%)

Query: 186 VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  F+   A      Q +    A      +   P FR E+  + R   EF+ ++ E++
Sbjct: 290 AFENDFFKRQAFLTVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIA 349

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRICYDD 281
           F    D +N  E  ++ + +   +                            F+RI Y  
Sbjct: 350 FANLQDDMNCAEKYVQYLCKWLLDHCREDMEFMVKNYDKSAIERLELVSSTPFVRISYTK 409

Query: 282 AIRRYGTD-KPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
           A+            N +   +   +EH  +    +F K + V
Sbjct: 410 AVELLKNVTDKKFDNKVEWGIDLASEHERYLTEDIFKKPVIV 451



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+ Q   + G+  E  E          + 
Sbjct: 466 NDDDKTVAAMDVLVPKVGELIGGSQREERLDVLKQRILDAGLPLEPYE----WYLDLRRF 521

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   H G   G +R+++   G +N+R+V  FP      DL
Sbjct: 522 GSVKHSGFGLGFERMILFATGMENIRDVIPFPRYPGRADL 561


>gi|302805645|ref|XP_002984573.1| hypothetical protein SELMODRAFT_423731 [Selaginella moellendorffii]
 gi|300147555|gb|EFJ14218.1| hypothetical protein SELMODRAFT_423731 [Selaginella moellendorffii]
          Length = 531

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 70/177 (39%), Gaps = 12/177 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G +  G  + + GW+   R H G++FL + D    + +    D       + + +   L 
Sbjct: 22  GAALAGQTLCVGGWIKSRRTHRGVVFLALSDGSCASSLQVIVDPEKELDTEQLHTGSCLL 81

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + G ++    +          +EL A++    + A+    P+   +  PE +R     L 
Sbjct: 82  VKGELVLSPGKGQA-------VELHAREFLHAAPADASKYPIAKTKLPPEFLR---TVLH 131

Query: 133 LRRDT--LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           LR  T  +      R+ ++ +       + FI   TPI+T S  EGA +    + + 
Sbjct: 132 LRPRTDLISSVARIRSALVLATHTFFQQQGFIHVHTPIITTSDCEGAGEMFQVTTLL 188



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 30/161 (18%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
             A++   ++A++L        +  ++ D+P             A   F M        +
Sbjct: 401 DLASEHERYLAEQLFQ------KPVFVYDYP------------KAIKAFYM--------R 434

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            ND     A    LV    E+  G  R    EV++Q    + +      + +       +
Sbjct: 435 VNDDGQTVAAMDMLVPKVGELVGGSQREERYEVLVQRLEELELPL----DSYEWYLDLRR 490

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
            G   H G   G +R+++ + G +N+R+V  FP S    +L
Sbjct: 491 YGSVKHSGFGLGFERMLLFVTGLENIRDVIPFPRSTGKAEL 531



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 58/186 (31%), Gaps = 31/186 (16%)

Query: 190 SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+  P       Q +    A      +   P FR E   + R   EF  ++ E++F E 
Sbjct: 263 DFFGRPAFLTVSGQLQAETYACALSNVYTFGPTFRAEQSHTSRHLAEFLMVEPELAFAEL 322

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS----------------------NNFLRICYDDAIR 284
            D ++  E+ ++ + +   +                             F RI Y  AI 
Sbjct: 323 KDDMDCAEDYVKFMCQWLLDRCYDDIKLMDDKLTESGALERLQNVVSAPFARITYTQAIE 382

Query: 285 RYGT-DKPDLRNPII--MHNVTEHFVHSEFRVFSKILSV---NPGYEVWAIPAKGGGGNR 338
                       P+   M   +EH  +   ++F K + V       + + +     G   
Sbjct: 383 MLKEVKDFTFETPVEWGMDLASEHERYLAEQLFQKPVFVYDYPKAIKAFYMRVNDDGQTV 442

Query: 339 AFCDRM 344
           A  D +
Sbjct: 443 AAMDML 448


>gi|197100346|ref|NP_001126762.1| aspartyl-tRNA synthetase, mitochondrial [Pongo abelii]
 gi|55732562|emb|CAH92981.1| hypothetical protein [Pongo abelii]
          Length = 171

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 6/125 (4%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT++CG+L  S +G  V L GW+   R +    FL +RD  G+ QV+   D +   + K 
Sbjct: 50  RTNACGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKI 106

Query: 65  VRS---EWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +     E V+ + G V+SR A   N  + TG+IE+  +  E+L+  ++LP  +    +  
Sbjct: 107 LCDAPVESVVQVSGTVISRPAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKDFVKKT 166

Query: 122 ESIRF 126
           E++R 
Sbjct: 167 EALRL 171


>gi|168020316|ref|XP_001762689.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686097|gb|EDQ72488.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 554

 Score =  105 bits (263), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 62/173 (35%), Gaps = 9/173 (5%)

Query: 17  VGSFVRLSGWVHRVRPHGGII--FLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           +G  V + GWV   R  G     FL++ D   I  +    D+      +   +   + + 
Sbjct: 27  IGQKVTVGGWVKTGRVMGKTASAFLEVNDGSWIGNLQVLVDATVATERQLTLTGTSVLVQ 86

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G ++    +         ++EL  + I  +        P+   +   ES+R     L  R
Sbjct: 87  GKLVEPPED------KKQKVELLVETILHVGTVNAAKYPIAKTKLSLESLR-SQLHLRAR 139

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            +T+      R  +  +         F+   TPI+T S  EGA +    + + 
Sbjct: 140 TNTISAVARIRHALAVATHTFFDRNGFMWVHTPIITTSDCEGAGEMFQVTTLF 192



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 57/165 (34%), Gaps = 34/165 (20%)

Query: 190 SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+A         Q +    A      +   P FR E+  + R   EF+ ++ E++F + 
Sbjct: 280 DFFARQAFLTVSGQLQVETYACALSNVYTFGPTFRAENSHTTRHLAEFWMIEPEIAFADL 339

Query: 247 DDILNTMENVLRGVFEEFSNGN---------------------TVSNNFLRICYDDAIRR 285
            D +N  E+ +R + +   +                         S  F+RI Y +AI  
Sbjct: 340 QDDMNCAEDYVRFMCQWLLDHCLEDMKFISSMYDKTAVDRLKLVASTPFVRITYTEAIEI 399

Query: 286 Y--------GTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
                    G  +    N +   +   +EH  +    ++ K + V
Sbjct: 400 LEKARTSKCGVTEKKFENKVEWGIDLASEHERYLTEEIYKKPVIV 444



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+ +    + +  E  E          + 
Sbjct: 459 NDDEKTVAAMDVLVPKVGELVGGSQREERQDVLERRLKEMNLPMEPYE----WYIDLRRH 514

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   H G   G +R+++   G +N+R+V  FP      +L
Sbjct: 515 GTVKHAGFGLGFERMILFATGLENIRDVIPFPRYPGKAEL 554


>gi|115903663|ref|XP_785385.2| PREDICTED: similar to Pleckstrin homology domain containing, family A
            (phosphoinositide binding specific) member 1
            [Strongylocentrotus purpuratus]
 gi|115966295|ref|XP_001176071.1| PREDICTED: similar to Pleckstrin homology domain containing, family A
            (phosphoinositide binding specific) member 1
            [Strongylocentrotus purpuratus]
          Length = 1461

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 4/99 (4%)

Query: 473  DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
            D     +  YD    G EI SG  R H S+ +L+   +  I       +      AF+ G
Sbjct: 1367 DEDPQYSNSYDCFMRGEEIMSGAQRVHDSKFLLERAKHHNIDI----EKIKAYIDAFRYG 1422

Query: 533  MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             PPH G   G++R+ ML LG  N+R+ SLFP        
Sbjct: 1423 APPHAGGGIGLERVTMLYLGLDNIRKTSLFPRDPKRLTP 1461


>gi|242041411|ref|XP_002468100.1| hypothetical protein SORBIDRAFT_01g039570 [Sorghum bicolor]
 gi|241921954|gb|EER95098.1| hypothetical protein SORBIDRAFT_01g039570 [Sorghum bicolor]
          Length = 561

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 63/178 (35%), Gaps = 9/178 (5%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G +  G  V + GWV   R  G     FL++ D      +    D+A   +A+   +   
Sbjct: 35  GTARAGDRVVVGGWVRTGREQGKGSFAFLELSDGSCAATLQVIVDAAVHPLARLTATGTS 94

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYR 129
           + ++G +      T         +EL   ++  +   +    P   G+ +          
Sbjct: 95  VLVEGEIKEPPEGTK------QNVELKVSRVLEVGEVDAAVYPLPKGKVKLTLEKLRDVV 148

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            L  R +T+      R ++  +         F+   TPI+T S  EGA +    + + 
Sbjct: 149 HLRSRTNTIGAVARIRHQLAYASHTFFNENGFLYVHTPIITTSDCEGAGEMFQVTTLF 206



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 52/162 (32%), Gaps = 27/162 (16%)

Query: 186 VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  F+   A      Q +    A      +   P FR E+  + R   EF+ ++ E++
Sbjct: 290 AFENDFFKRQAFLTVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIA 349

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRICYDD 281
           F    D +N  E  ++ + +   +                            F+RI Y  
Sbjct: 350 FANLQDDMNCAEKYVQYLCKWLLDHCQEDMEFMVKNYDKSAIERLELVSSTPFVRISYTK 409

Query: 282 AIRRYGTD-KPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
           A+            N +   +   +EH  +    +F K + V
Sbjct: 410 AVELLKNVTDKKFDNKVEWGIDLASEHERYLTEDIFKKPVIV 451



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+ Q   + G+  E  E          + 
Sbjct: 466 NDDDKTVAAMDVLVPKVGELIGGSQREERLDVLKQRILDAGLPLEPYE----WYLDLRRF 521

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   H G   G +R+++   G +N+R+V  FP      DL
Sbjct: 522 GSVKHSGFGLGFERMILFATGMENIRDVIPFPRYPGRADL 561


>gi|288575820|ref|ZP_06393990.1| lysine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288566802|gb|EFC88362.1| lysine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 306

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 12/145 (8%)

Query: 158 AENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216
            E+++E  TP++        A+ F+          Y L  AP+ Y + L+  G +R F+I
Sbjct: 2   NEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLY-LRIAPELYLKRLVVGGLERVFEI 60

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--- 273
              FR+ +  S R   EF  ++   +F + + ++   E+++R      +    +S N   
Sbjct: 61  NRSFRN-EGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAKISYNGKE 119

Query: 274 ------FLRICYDDAIRRYGTDKPD 292
                 F R+   DAI++Y     D
Sbjct: 120 VDLESPFERLTIIDAIKKYNPHYTD 144



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 180 GCAESKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 218

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F +    K+  ++          RA + G+PP GG  
Sbjct: 219 FVVGRELANGYSELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 278

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 279 IGIDRLVMLLTDSQTIRDVILFPQMR 304


>gi|331009250|gb|EGH89306.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 210

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 71/177 (40%), Gaps = 22/177 (12%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTTVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                     R++ R++DL  +  + +    R+++I  +R  ++  +F+E  TP+L 
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETPMLQ 207


>gi|70983333|ref|XP_747194.1| aspartate-tRNA ligase [Aspergillus fumigatus Af293]
 gi|66844819|gb|EAL85156.1| aspartate-tRNA ligase, putative [Aspergillus fumigatus Af293]
          Length = 562

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 94/249 (37%), Gaps = 16/249 (6%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V L      +R + G+I  +I      T V    +  C E    + +      +    
Sbjct: 126 KRVTLE-----LRTNEGVIKANIDASSIGTSVWERLNGLCPESLVRITNYSSPSAE---A 177

Query: 79  SRSAETINAN--IITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
                 +N    I     E++   + I++ A    LP F   E   + R   R LDLR  
Sbjct: 178 EPKKSVVNGKSHIDKATPEINVTNLTIIAEACP-DLPSFNRNELDLARRLDNRLLDLRNA 236

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
                +   + +   +   + +  F    +P + + +  G +++         ++ A  Q
Sbjct: 237 GSGAILKLHSGMCQLIVEFLGSNGFHWIHSPRIISHTVAGDKEYFHLPYFGGDAWLA--Q 294

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDE-DPRSD-RLPGEFYQLDMEMSFVE-QDDILNTM 253
             Q   Q+++++  +R F I P FR E   R+  R   EF  L   M   E   ++++ M
Sbjct: 295 NAQYQNQMVLSTDMERVFDIGPAFRAEVKSRTSGRHLTEFTLLGTAMVLEENYYEVMDLM 354

Query: 254 ENVLRGVFE 262
           ++++  V +
Sbjct: 355 DSMIVFVLK 363



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 2/100 (2%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           +         +D +  G EI SG  R H  E + +A ++  +  +  E  +     AF+ 
Sbjct: 465 SPDAPGFTNSWDTIVRGREICSGSQRIHKYEAVCKAMASRNMDPDGKE--WEHYVGAFKS 522

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GMPPHGG+  G++R++   LG  +VRE +LFP   +    
Sbjct: 523 GMPPHGGLGLGVNRLLQGFLGLDDVRETTLFPRDVHRTAP 562


>gi|224122518|ref|XP_002330501.1| predicted protein [Populus trichocarpa]
 gi|222872435|gb|EEF09566.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 5   RTHSCG-DLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEI 61
           R+  C  D G    G+ VR  GWV   R  G     FL++ D      +    D+   ++
Sbjct: 34  RSIVCRPDGGAGLAGNRVRAGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDAGVEDL 93

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
           +  V++   + ++G++      T        +IEL  +++  +   +    P   + +  
Sbjct: 94  STLVQTGTCVSVEGVLKVPPEGTK------QKIELRVERVLHVGPTDPAKYP-IPKTKLS 146

Query: 122 ESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
                 +  L  R +T+      R  +  +         F+   TPI+T S  EGA +  
Sbjct: 147 LEFLRDHIHLRPRTNTISAVARIRNALAFATHSFFQEHGFLYIHTPIVTTSDCEGAGEMF 206

Query: 182 VPSRV 186
             + +
Sbjct: 207 QVTTL 211



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    EV+ Q  + +G+        +       + 
Sbjct: 473 NDDSKTVAAMDILVPKVGELIGGSQREERYEVIQQRIAEMGLPL----EPYDWYLDLRRY 528

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   H G   G +R+++   G  N+R+V  FP      DL
Sbjct: 529 GTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGRADL 568



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 53/160 (33%), Gaps = 29/160 (18%)

Query: 190 SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+A         Q +    A      +   P FR E   + R   EF+ ++ E++F + 
Sbjct: 299 DFFARQAFLTVSGQLQVETYACAVTSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADL 358

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRICYDDAIRR 285
            D +N  E  ++ + +   +                            F RI Y +A+R 
Sbjct: 359 QDDMNCAEAYVKYMCQWLLDKCFDDMELMAKLYDKGCIDRLRMVSSTPFERISYTEAVRL 418

Query: 286 Y-----GTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
                 G  + +      +   +EH  +    +F K + V
Sbjct: 419 LEEAVRGGKEFEKNVEWGIDLASEHERYLTEEIFKKPVIV 458


>gi|213400771|gb|ACJ47034.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Folsomia
           candida]
          Length = 134

 Score =  105 bits (261), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 52/135 (38%), Positives = 74/135 (54%), Gaps = 6/135 (4%)

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
             NF RI Y +A+ +YG+DKPDLRNP+++ +VTE F  SEF +F K +           P
Sbjct: 5   EKNFPRITYKEAMLKYGSDKPDLRNPLLISDVTEIFRDSEFNIFKKNVECGMVVRAIPAP 64

Query: 331 AKGGGGNRAFCDRMNEWA-RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRV 389
            K     R+F D+  E A +  G  GL YI +  D+ G  +  GP+AK L+      IR 
Sbjct: 65  -KTAKEPRSFFDKKIEHAQKEFGAKGLGYITF--DDDG--SAKGPIAKFLDENRLNQIRE 119

Query: 390 RLDMQDGDSCFFIAG 404
             +++ GDS FF +G
Sbjct: 120 MTNIKPGDSVFFTSG 134


>gi|242241686|ref|ZP_04796131.1| conserved hypothetical protein [Staphylococcus epidermidis W23144]
 gi|242234862|gb|EES37173.1| conserved hypothetical protein [Staphylococcus epidermidis W23144]
          Length = 75

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 49/75 (65%), Positives = 61/75 (81%)

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           M    F++  TP+LT ++PEGARD+LVPSRV++G FYALPQ+PQ +KQLLM SGFDRY+Q
Sbjct: 1   MDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQ 60

Query: 216 IAPCFRDEDPRSDRL 230
           I  CFRDED R+DR 
Sbjct: 61  IVKCFRDEDLRADRQ 75


>gi|45190553|ref|NP_984807.1| AEL054Cp [Ashbya gossypii ATCC 10895]
 gi|44983495|gb|AAS52631.1| AEL054Cp [Ashbya gossypii ATCC 10895]
          Length = 477

 Score =  104 bits (260), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 99/285 (34%), Gaps = 38/285 (13%)

Query: 5   RTHSCGDL-GVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
           RT +  DL  + D     + + G V   R      FLD+ D      +            
Sbjct: 18  RTITVRDLLQLQDAPKQPLDVQGRVRSFRAMKNASFLDLEDGSSKNALKVVISHHGRPNP 77

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            ++++   + +   +   + +   A     ++      ++++              +  +
Sbjct: 78  VTLKTGQSVAVRDAMWKWTPDRQQAF----ELACQPTDVQVIG-------------DVTD 120

Query: 123 SIRFKYRFLDL-----------RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA 171
               + +++ L           R   L   +  R+ I  ++   +  E   +   P++T+
Sbjct: 121 EYPLQKKYVSLKHLRQWPLWKHRTQYLGGLLRFRSHIEATLTQILTQEGIYKVPPPVVTS 180

Query: 172 SSPEGARDFLVPS----RVNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
              EGA +         R +Q  ++   A      Q    ++A    R + + PCFR E+
Sbjct: 181 GDCEGAGELFHVEANSLRASQRKYFGTNAYLTVSAQMHLEVIALALGRVWALTPCFRAEE 240

Query: 225 PRSDRLPGEFYQLDMEMSFV-EQDDILNTMENVLRGVFEEFSNGN 268
             + R   EF+ L+ E+ FV +   +   ++ +++ +        
Sbjct: 241 SDTSRHLSEFWMLEAELCFVQDVTQLTGFVQKLIQELARTLLQRQ 285



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 47/130 (36%), Gaps = 26/130 (20%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             ++ D+P                 F M     +              +DL+     E+ 
Sbjct: 363 PVFVTDYP------------RECKAFYMRLNDDKKTFA---------CFDLLFPEMGEVM 401

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G IR    + +L+  ++  ++   ++       +  + G  PHGG   G++R++  L G
Sbjct: 402 GGSIREERYDALLREMTSRNMNIAELD----WYLQLRRQGSAPHGGFGLGMERLISWLYG 457

Query: 553 AKNVREVSLF 562
             NVR+   F
Sbjct: 458 NHNVRDAIGF 467


>gi|224550149|gb|ACN54159.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Nasonia
           giraulti]
 gi|224550151|gb|ACN54160.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Nasonia
           longicornis]
 gi|224550153|gb|ACN54161.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Nasonia
           longicornis]
          Length = 151

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 58/157 (36%), Positives = 85/157 (54%), Gaps = 7/157 (4%)

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           MSFV Q+DI   +E+ L  VF +FS   +V  +F RI Y DA+ +YG+DKPDLRNP+++ 
Sbjct: 1   MSFVTQEDIFQVIESTLYKVFAKFS-RKSVDKDFPRITYKDAMLKYGSDKPDLRNPLLIS 59

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA-RSQGQPGLAYI 359
           +VTE F +SEF +F   +           P K     R+F D+  E A +  G  GL YI
Sbjct: 60  DVTEIFRNSEFNIFKSNIERGMVVRAIPAP-KTAEEPRSFFDKKIEHAQKELGAKGLGYI 118

Query: 360 FWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
            +  D        GP+AK L+     +I+   +++ G
Sbjct: 119 TFDKDGIAK----GPIAKFLDDNRLNSIKEITNVKPG 151


>gi|194387516|dbj|BAG60122.1| unnamed protein product [Homo sapiens]
          Length = 299

 Score =  104 bits (259), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 72/211 (34%), Gaps = 18/211 (8%)

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
              R       + E + P L  +  EG           + +F  L Q+ Q Y +  +   
Sbjct: 5   WCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFGEEAF--LTQSSQLYLETCLP-A 61

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS---- 265
               F IA  +R E  R+ R   E+  ++ E  F+  DD+LN +E+++  V +       
Sbjct: 62  LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLEDLVCDVVDRILKSPA 121

Query: 266 ---------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
                    N       F R+ Y DAI           +    +   E    +  R+ + 
Sbjct: 122 GSIVHELNPNFQPPKRPFKRMNYSDAIVWLKEHDVKKEDG-TFYEFGEDIPEAPERLMTD 180

Query: 317 ILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
            ++       + +  K     R   D R+ E
Sbjct: 181 TINEPILLCRFPVEIKSFYMQRCPEDSRLTE 211



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   SE +L  +   GI        +       + G  PHGG   G+
Sbjct: 216 LMPNVGEIVGGSMRIFDSEEILAGYKREGIDPTP----YYWYTDQRKYGTCPHGGYGLGL 271

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R +  +L   ++R+V L+P     C  
Sbjct: 272 ERFLTWILNRYHIRDVCLYPRFVQRCTP 299


>gi|7007427|dbj|BAA90843.1| LysS [Bacillus halodurans]
          Length = 310

 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 158 AENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216
              ++E  TP + +      AR F+        + Y +  A + + + L+  G ++ ++I
Sbjct: 1   DRGYLEVETPTMHSIPGGASARPFVTHHNALDMTLY-MRIAIELHLKRLIVGGMEKVYEI 59

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
              FR+E   +   P EF  +++  ++ + +DI+   E ++  + ++     T++     
Sbjct: 60  GRVFRNEGVSTRHNP-EFTMIELYEAYADYNDIMELTELLIAHIAKDVLGTTTITYGEHE 118

Query: 277 ICYDDAIRRYGT 288
           +  +   RR   
Sbjct: 119 VNLEPKWRRVHM 130



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 6/161 (3%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
             +A+E  +       +  +++  F+E   EEK I               + K  D    
Sbjct: 152 RALAKEHNVPVKETMTYGHVVN-EFFEHFVEEKLIQPTFVYGHPVAISPLAKKNPD-DPR 209

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGM 533
              +++L   G E A+     +        F    + +E  ++           + + GM
Sbjct: 210 FTDRFELFIVGREHANAFSELNDPIDQRHRFEQQLVEREQGDDEAHMMDEDFVESLEYGM 269

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMG 574
           PP GG+  GIDR+VMLL  + ++R+V LFP  ++       
Sbjct: 270 PPTGGLGIGIDRLVMLLTNSPSIRDVLLFPQMRHKDSPATE 310


>gi|323455951|gb|EGB11818.1| hypothetical protein AURANDRAFT_70646 [Aureococcus anophagefferens]
          Length = 264

 Score =  103 bits (258), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 49/124 (39%), Gaps = 4/124 (3%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   +  PF       E+          +  +D+   G EI SG  R H   ++++  + 
Sbjct: 142 KYPLSIRPF-YTMPDPETYGKVPPAQQLSNSFDMFMRGQEIVSGAQRVHDHALLMERVNF 200

Query: 511 VGI---SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                           G   AF+ G  PHGG   G++R+VML LG  N+R+VS FP    
Sbjct: 201 CHSGGGHGGPAPEDIKGYTDAFKYGAFPHGGGGVGLERVVMLYLGLTNIRKVSCFPRDPT 260

Query: 568 FCDL 571
               
Sbjct: 261 RLTP 264



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS-FVEQDDILNTMENVLRGVF 261
            + F+R ++I P FR ED  + R   EF  LD EM+ +    +IL+    +   +F
Sbjct: 5   CADFERIYEIGPVFRAEDSNTRRHLCEFTGLDFEMAIYEHYYEILHVFSELFAHIF 60


>gi|257487125|ref|ZP_05641166.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 206

 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 22/176 (12%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R   C DL    V             V+++G +   R      F+ I+D  G  QV  N 
Sbjct: 42  RDSYCNDLQKQYVDKTKEELAEAAIPVKVAGRIMLNRGS----FMVIQDMTGRIQVYVNR 97

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPV 114
            +   E    V++  +  I       +AE   A    G + +    + +L+ +   PLP 
Sbjct: 98  KTLPEETLAEVKTWDLGDI------IAAEGTLARSGKGDLYVEMTTVRLLTKSLR-PLPD 150

Query: 115 FGEREYPESIRFKYRFLDLRRDT-LHKNIVKRTRIINSMRCRMIAENFIECSTPIL 169
                     R++ R++DL  +  + +    R+++I  +R  ++  +F+E  TP+L
Sbjct: 151 KHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETPML 206


>gi|302773353|ref|XP_002970094.1| hypothetical protein SELMODRAFT_92995 [Selaginella moellendorffii]
 gi|300162605|gb|EFJ29218.1| hypothetical protein SELMODRAFT_92995 [Selaginella moellendorffii]
          Length = 563

 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 68/180 (37%), Gaps = 8/180 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPH--GGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G   +G  VR+ GWV   R H  G + FL++ D      +    +      A+ + +   
Sbjct: 33  GAGLLGHNVRVGGWVKTGRSHEKGRLTFLELNDGSCPANLQVIVEDTVTPDAQLIYTGTC 92

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L ++G +               ++EL AQK+  +   +    P+   R   E +R     
Sbjct: 93  LVVEGELTQPPE-----TAKKQKVELRAQKVLEVGPVDASKYPIAKGRHTLEFLRNLM-H 146

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +T+      R  +  +         F+   TPI+T S  EGA +    + +   +
Sbjct: 147 LRSRTNTISSVARIRNALAFATHTFFQQNRFVYVHTPIITTSDCEGAGEMFQVTTMFSEA 206



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    EV++Q    + +  E  E          + 
Sbjct: 468 NDDGKTVAAMDILVPKVGELVGGSQREERYEVLVQRLQELNLPTEPYE----WYLDLRRY 523

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G   H G   G +R+V+   G +N+R+V  FP 
Sbjct: 524 GTVKHSGFGLGFERMVLFATGLENIRDVIPFPR 556



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 3/98 (3%)

Query: 187 NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
             G F+   A      Q +    A      +   P FR E+  + R   EF+ ++ E++F
Sbjct: 288 YTGDFFGRQAFLTVSGQLQVETYACSLSNVYTFGPTFRAENSHTTRHLAEFWMIEPELAF 347

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
            +  D +N  E+ ++ + +   +       F+   +D+
Sbjct: 348 ADLQDDMNCAEDYVKFLCQWLLDNCYDDMEFMTKMWDN 385


>gi|302807108|ref|XP_002985285.1| hypothetical protein SELMODRAFT_121831 [Selaginella moellendorffii]
 gi|300147113|gb|EFJ13779.1| hypothetical protein SELMODRAFT_121831 [Selaginella moellendorffii]
          Length = 563

 Score =  103 bits (258), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 68/180 (37%), Gaps = 8/180 (4%)

Query: 13  GVSDVGSFVRLSGWVHRVRPH--GGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G   +G  VR+ GWV   R H  G + FL++ D      +    +      A+ + +   
Sbjct: 33  GAGLLGHNVRVGGWVKTGRSHEKGRLTFLELNDGSCPANLQVIVEDTVTPDAQLIYTGTC 92

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           L ++G +               ++EL AQK+  +   +    P+   R   E +R     
Sbjct: 93  LVVEGELTQPPE-----TAKKQKVELRAQKVLEVGPVDASKYPIAKGRHTLEFLRNLM-H 146

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  R +T+      R  +  +         F+   TPI+T S  EGA +    + +   +
Sbjct: 147 LRSRTNTISSVARIRNALAFATHTFFQQNRFVYVHTPIITTSDCEGAGEMFQVTTMFSEA 206



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    EV++Q    + +  E  E          + 
Sbjct: 468 NDDGKTVAAMDILVPKVGELVGGSQREERYEVLVQRLQELNLPTEPYE----WYLDLRRY 523

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G   H G   G +R+V+   G +N+R+V  FP 
Sbjct: 524 GTVKHSGFGLGFERMVLFATGLENIRDVIPFPR 556



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 3/98 (3%)

Query: 187 NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
             G F+   A      Q +    A      +   P FR E+  + R   EF+ ++ E++F
Sbjct: 288 YTGDFFGRQAFLTVSGQLQVETYACSLSNVYTFGPTFRAENSHTTRHLAEFWMIEPELAF 347

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDD 281
            +  D +N  E+ ++ + +   +       F+   +D+
Sbjct: 348 ADLQDDMNCAEDYVKFLCQWLLDNCYDDMEFMTKMWDN 385


>gi|255068595|ref|ZP_05320450.1| lysine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255047153|gb|EET42617.1| lysine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 306

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 12/145 (8%)

Query: 158 AENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQI 216
            E+++E  TP++        A+ F+          Y L  AP+ Y + L+  G +R F+I
Sbjct: 2   NEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLY-LRIAPELYLKRLVVGGLERVFEI 60

Query: 217 APCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--- 273
              FR+ +  S R   EF  ++   +F + + ++   E+++R      +    +S N   
Sbjct: 61  NRSFRN-EGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASHTVNGTAKISYNGKE 119

Query: 274 ------FLRICYDDAIRRYGTDKPD 292
                 F R+   +AI++Y     D
Sbjct: 120 VDLESPFERLTILEAIKKYNPHYTD 144



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 180 GCAEGKLWNPTFIVDYP---------------------VEVSPLARASDTKQGLTERFEL 218

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F      K+  ++          RA + G+PP GG  
Sbjct: 219 FVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 278

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 279 IGIDRLVMLLTDSQTIRDVILFPQMR 304


>gi|242003295|ref|XP_002422684.1| asparaginyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212505506|gb|EEB09946.1| asparaginyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 469

 Score =  103 bits (257), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 94/259 (36%), Gaps = 29/259 (11%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L    VG +  + GW+  VR   G +F+D+ D     ++          +     +   +
Sbjct: 33  LENKPVGVYKIIKGWIKSVRKLKGFLFIDVTDGSCFDKIQV--------VIPKNSNPKKV 84

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVA-EELPLPVFGEREYPESIRFKYRF 130
                + +     IN +   G +EL A+ I +  +  +E   P    ++ P     +Y +
Sbjct: 85  GWGASINALGKLQINPS---GNLELMAESISVEGICNKESNYPFSSSQKQPFDHYRQYIY 141

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           L  +    +     R               FI   TPI+T++  EG  +        + +
Sbjct: 142 LRPQLRYFNSLFRLRHSATLGFHQYFDKNGFIGIHTPIITSNDCEGGGEVFSAETFYKNN 201

Query: 191 FYALPQAPQQYKQL-------LMASG---FDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              + +  +   Q        L  SG    +         R E+ RS     EFY ++ E
Sbjct: 202 ESPMKEKSETNNQFFFDTPALLTVSGQLHLEAV------TRAENSRSRLHLSEFYMIEAE 255

Query: 241 MSFV-EQDDILNTMENVLR 258
            +FV + + IL  MEN ++
Sbjct: 256 EAFVKDINVILERMENCIK 274



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 27/146 (18%)

Query: 422 QELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ 481
           +EL ++  N     +++D+P     +E          F M +     ++  DL       
Sbjct: 347 EELFLVKNNNNIPIFVIDWP-----KEN-------MAFYMKEKNDL-VEKVDL------- 386

Query: 482 YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
             LV N  E+  G +R +  E + +      + +  + +         + G  P GG   
Sbjct: 387 --LVPNVGELCGGSLRENRYETLKKK-----LKESDILDSMEWYLNLRKYGNVPTGGFGM 439

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R +  +L  +N+++   FP   +
Sbjct: 440 GFERFLQFMLNTQNIKDTIPFPRWPH 465


>gi|221130529|ref|XP_002161050.1| PREDICTED: similar to Asparaginyl-tRNA synthetase CG10687-PA,
           partial [Hydra magnipapillata]
          Length = 512

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 112/345 (32%), Gaps = 61/345 (17%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
                   V++ GWVHR+R  G  ++F+ +RD  G  Q V N        A  + +E  +
Sbjct: 119 TNEHREERVKIYGWVHRLRQQGKNLMFIVLRDGTGFLQCVLNDQLCQTYNAVRLSTESSV 178

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
            + G +              G  E+     E++  +    L      +     +   R L
Sbjct: 179 LLYGTIQELPEG----KSAPGGHEMIVDYWEVVGFSPAGGLENVVTEQSSIDTQLDNRHL 234

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            LR + L K +  R+ + +  R    A  ++E + P L  +               + ++
Sbjct: 235 TLRGEHLSKILRIRSTVTHCFREHYFARGYVEITPPTLCHA---------------KNAY 279

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
            ++P + +        S                         +  ++ E  F++ +++LN
Sbjct: 280 VSIPFSTKLAVSPSAPSTL-----------------------YTHVEGECPFIDFEELLN 316

Query: 252 TMENVLRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRY---GTDKPDLRN 295
            +E+++  V + F              +       F R+ Y +AI      G  K D   
Sbjct: 317 RIEDLVCDVVDRFLKSKEGALLSELNPDFKAPKRPFRRMKYSEAIEWLRADGYKKDDGTF 376

Query: 296 PIIMHNVTEHF--VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
                ++ E      ++      +L+  P         K     R
Sbjct: 377 YEFGEDIPEMPERRMTDTIGEPILLTHFPADVKAFYMQKDPKDRR 421



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 13/115 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
                   F M +                   DL+  G  E+  G +R    + +++A+ 
Sbjct: 403 HFPADVKAFYMQKD--------PKDRRVCEAVDLLMPGVGEVLGGSMRMDSYDELMEAYQ 454

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              +        +       + G   HGG   G+DR +  L    ++R+V  +P 
Sbjct: 455 KKELDPTP----YYWYTDQRKFGTSSHGGYGLGLDRFITWLANRNHIRDVCFYPR 505


>gi|323509049|dbj|BAJ77417.1| cgd7_1540 [Cryptosporidium parvum]
          Length = 250

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K      PF       E  K        +  +D    G EI SG  R H  +++++    
Sbjct: 141 KYPLKVRPFYTMPDFDEPEK-------WSNSFDFFMRGEEILSGAQRVHDYDLLVKRCQE 193

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            G+S+  + +       +F+ G PPHGG   G++R++ML L   N+R+ S+FP       
Sbjct: 194 CGVSEHSLRD----YLNSFKLGAPPHGGCGIGLERVIMLFLNLGNIRKSSMFPRDPKRLS 249

Query: 571 L 571
            
Sbjct: 250 P 250



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEF 264
           +    +R F+I P FR E+  + R   EF  +D+EM+      ++++  + + R +F+  
Sbjct: 3   ICGDLERVFEIGPVFRAENSNTHRHLCEFVGVDIEMNIENTYHELVDVFDAMFRHIFQGI 62

Query: 265 SNGNTVS 271
           +      
Sbjct: 63  NTHCKNE 69


>gi|268572787|ref|XP_002641412.1| Hypothetical protein CBG13278 [Caenorhabditis briggsae]
          Length = 397

 Score =  103 bits (256), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 70/198 (35%), Gaps = 17/198 (8%)

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLR 134
           G  +        +     + E  A ++ ++   E          +       K   L  R
Sbjct: 30  GSAIRAVGSLEKSLGSQQETEFVASELRVVGQDENARYD-----DLSADNLRKKTHLRAR 84

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY-- 192
                  +  R+ I        ++ +FI   TP LT +  EG  +       +  +    
Sbjct: 85  NVQFAAFLRLRSTIFRETHEFFMSRDFIHIDTPKLTRNDCEGGGEVFDVVTTSSEALNGS 144

Query: 193 --------ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                    L  + Q + + L  S   R + + P FR E  +S     EF+ L+ E++FV
Sbjct: 145 EGVKEDPIYLSVSSQLHLEAL-VSRLQRVYTLGPAFRAEKQQSHAHLSEFHMLEAEVAFV 203

Query: 245 -EQDDILNTMENVLRGVF 261
              D++   +E+ ++ +F
Sbjct: 204 ETIDEMCELVESYVQHMF 221



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 36/169 (21%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+   +     K  + +         EL ++  +     ++  +P               
Sbjct: 257 DAVKLLTSKGSKVTAKSG---LSKKNELDLVKYHNNLPVFVTHYP------------TNQ 301

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISK 515
            PF M +   E+             +DL+  G  E+A G +R   +E +      +    
Sbjct: 302 KPFYMARTKDET---------STLSFDLLVPGVGELAGGSVREPDAEKLKSRGCGIE--- 349

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                         + G PP  G   G +R++  +LG +N+++   FP 
Sbjct: 350 --------WYLDTRRRGQPPTAGFGIGFERLLQYMLGIQNIKDTLAFPR 390


>gi|145520227|ref|XP_001445971.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413444|emb|CAK78574.1| unnamed protein product [Paramecium tetraurelia]
          Length = 366

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 63/418 (15%), Positives = 112/418 (26%), Gaps = 98/418 (23%)

Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
           + FIE  TP L                 +      +  AP+ Y ++L+  G DR ++   
Sbjct: 2   KGFIEVETPSLNVIQGGATAKPFKTFHNSLHRDLFMRVAPELYLKMLIVGGLDRVYE--- 58

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
                                                    + + F N      +     
Sbjct: 59  -----------------------------------------IGKNFRNEGIDQTHNPEFT 77

Query: 279 YDDAIRRYG--TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
              A+  Y    D  DL                    F      NP   +     K G  
Sbjct: 78  ---AMEFYWAYCDYNDLMTVTEEVLSQIVLKLKGSYKFKIHKGDNPTITLTEHDIKSGHF 134

Query: 337 NRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG 396
                D +                        V+ M  + K L       +   L+ ++ 
Sbjct: 135 KEKEEDFLE--------------LDFTPPWPRVSMMAELEKKLGE----KLPEVLESEEA 176

Query: 397 DSCFFIAGDPLKF--CSFAADARNHIAQELGIINCNCFEFCWIMDF--PFYEWNEEEKKI 452
           ++ F       K    +    AR        +I+     F   ++F  P +  +      
Sbjct: 177 NAFFNAQAKKHKVECSNPRTTAR--------LIDKLVGHFL-EVNFKNPTFLID------ 221

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM----LQAF 508
               +P  M        +          +++L  N  E+ +     +   V      +  
Sbjct: 222 ----HPQLMSPLSKVHRQYP----GLTERFELFVNYHELCNAYTELNDPFVQKALFQKQV 273

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +     +       G  ++ +  +PP  G   GIDR VMLL   +N++EV LFP  +
Sbjct: 274 EDAAKGDDEAMGYDEGFIKSLEHALPPTAGWGLGIDRFVMLLTDTQNIQEVLLFPAMK 331


>gi|145351957|ref|XP_001420326.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580560|gb|ABO98619.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 563

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 70/177 (39%), Gaps = 9/177 (5%)

Query: 17  VGSFVRLSGWVHRVRPH--GGIIFLDIRDHYGITQVVANPDSACF-EIAKSVRSEWVLCI 73
           +G  + + GWV   R    G ++FL + D  G   +     S  + E+ +   +   + I
Sbjct: 42  IGRTIVVGGWVKTGREAERGALLFLAVNDGSGPGNLQVVVKSETYAELGELKTTGTSVVI 101

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
           +G + +              IE+ A ++ ++   +    P+  +++  E +R K   L  
Sbjct: 102 EGELRAPPESAKG-----QAIEMHATRVLMVGKCDGATYPIAKKKQTLEFLREKI-HLRP 155

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           R +T+      R+ +  +         F+   TP +T S  EGA +    + +   +
Sbjct: 156 RTNTIASVARVRSALAYATHTFFNQNGFLYVHTPCVTQSDCEGAGEMFQVTTLLSEA 212



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 4/98 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+ +      +        +       + 
Sbjct: 468 NDDNKTVAAMDVLVPKVGELIGGSQREERLDVLERRMVECDLVP----EEYSWYLDLRRY 523

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           G   H G   G +R+++L  G +N+R+V  +P   N C
Sbjct: 524 GTVTHAGFGLGFERLILLCTGMENIRDVIPYPRWPNNC 561



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 3/88 (3%)

Query: 190 SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+          Q +    A      +   P FR E+  + R   EF+ ++ E++F + 
Sbjct: 294 DFFGGKSYLTVSGQLQVETYACALSNVYTFGPTFRAENSNTTRHLAEFWMIEPELAFADL 353

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNF 274
           +D +   E+ +R               F
Sbjct: 354 NDDMQCAEDYVRFCCNYLLENCYGDLEF 381


>gi|226507460|ref|NP_001147875.1| LOC100281485 [Zea mays]
 gi|195614288|gb|ACG28974.1| asparaginyl-tRNA synthetase, cytoplasmic 3 [Zea mays]
          Length = 565

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 62/170 (36%), Gaps = 9/170 (5%)

Query: 21  VRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GWV   R  G     FL++ D      + A  D+A   +A+   +   + ++G++ 
Sbjct: 43  VVVGGWVRTGREQGKGSFAFLELSDGSCAATLQAIVDAAVHPLARLTATGTSVLVEGVIK 102

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDLRRDT 137
                T         +EL   ++  +   +    P   G+ +           L  R +T
Sbjct: 103 EPPEGTK------QNVELKVSRVLEVGEVDAAVYPLPKGKVKLTLEKLRDVVHLRSRTNT 156

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +      R ++  +         F+   TPI+T S  EGA +    + + 
Sbjct: 157 IGAVARIRHQLAYASHRFFDENGFLYVHTPIITTSDCEGAGEMFQVTTLF 206



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 186 VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  F+   A      Q +    A      +   P FR E+  + R   EF+ ++ E++
Sbjct: 290 AFENDFFKRQAFLTVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIA 349

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
           F    D +N  E  ++ + +   +       F+   YD
Sbjct: 350 FANLQDDMNCAEKYVQYLCKWLLDHCQEDMEFMVKNYD 387



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+ Q   + G+  E  E          + 
Sbjct: 466 NDDDKTVAAMDVLVPKVGELIGGSQREERLDVLKQRILDAGLPLEPYE----WYLDLRRF 521

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           G   H G   G +R+++   G +N+R+V  FP S+ 
Sbjct: 522 GSVKHSGFGLGFERMILFATGMENIRDVIPFPSSKK 557


>gi|223948185|gb|ACN28176.1| unknown [Zea mays]
          Length = 561

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 62/170 (36%), Gaps = 9/170 (5%)

Query: 21  VRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GWV   R  G     FL++ D      + A  D+A   +A+   +   + ++G++ 
Sbjct: 43  VVVGGWVRTGREQGKGSFAFLELSDGSCAATLQAIVDAAVHPLARLTATGTSVLVEGVIK 102

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDLRRDT 137
                T         +EL   ++  +   +    P   G+ +           L  R +T
Sbjct: 103 EPPEGTK------QNVELKVSRVLEVGEVDAAVYPLPKGKVKLTLEKLRDVVHLRSRTNT 156

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +      R ++  +         F+   TPI+T S  EGA +    + + 
Sbjct: 157 IGAVARIRHQLAYASHRFFDENGFLYVHTPIITTSDCEGAGEMFQVTTLF 206



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 186 VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  F+   A      Q +    A      +   P FR E+  + R   EF+ ++ E++
Sbjct: 290 AFENDFFKRQAFLTVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIA 349

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
           F    D +N  E  ++ + +   +       F+   YD
Sbjct: 350 FANLQDDMNCAEKYVQYLCKWLLDHCQEDMEFMVKNYD 387



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+ Q   + G+  E  E          + 
Sbjct: 466 NDDDKTVAAMDVLVPKVGELIGGSQREERLDVLKQRILDAGLPLEPYE----WYLDLRRF 521

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   H G   G +R+++   G +N+R+V  FP      DL
Sbjct: 522 GSVKHSGFGLGFERMILFATGMENIRDVIPFPRYPGRADL 561


>gi|195614258|gb|ACG28959.1| asparaginyl-tRNA synthetase, cytoplasmic 3 [Zea mays]
          Length = 561

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 62/170 (36%), Gaps = 9/170 (5%)

Query: 21  VRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V + GWV   R  G     FL++ D      + A  D+A   +A+   +   + ++G++ 
Sbjct: 43  VVVGGWVRTGREQGKGSFAFLELSDGSCAATLQAIVDAAVHPLARLTATGTSVLVEGVIK 102

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLP-VFGEREYPESIRFKYRFLDLRRDT 137
                T         +EL   ++  +   +    P   G+ +           L  R +T
Sbjct: 103 EPPEGTK------QNVELKVSRVLEVGEVDAAVYPLPKGKVKLTLEKLRDVVHLRSRTNT 156

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +      R ++  +         F+   TPI+T S  EGA +    + + 
Sbjct: 157 IGAVARIRHQLAYASHRFFDENGFLYVHTPIITTSDCEGAGEMFQVTTLF 206



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 186 VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  F+   A      Q +    A      +   P FR E+  + R   EF+ ++ E++
Sbjct: 290 AFENDFFKRQAFLTVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIA 349

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYD 280
           F    D +N  E  ++ + +   +       F+   YD
Sbjct: 350 FANLQDDMNCAEKYVQYLCKWLLDHCQEDMEFMVKNYD 387



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+ Q   + G+  E  E          + 
Sbjct: 466 NDDDKTVAAMDVLVPKVGELIGGSQREERLDVLEQRILDAGLPLEPYE----WYLDLRRF 521

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   H G   G +R+++   G +N+R+V  FP      DL
Sbjct: 522 GSVKHSGFGLGFERMILFATGMENIRDVIPFPRYPGRADL 561


>gi|33322808|gb|AAQ07139.1|AF496450_1 aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp. lactis]
          Length = 140

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 69/138 (50%), Gaps = 4/138 (2%)

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
           EF Q+D+E SF++++ +    E +L  V ++    + +     RI + +++ +YG DKPD
Sbjct: 1   EFTQIDLETSFMDEEGVQEVTEGLLAKVMKDVKGID-LQLPLPRITWQESMDKYGCDKPD 59

Query: 293 LRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
            R  +++H++   F  S F+VF+  L         A+       +R   + M ++ +   
Sbjct: 60  TRYEMLIHDLGNVFAKSGFKVFASALENGGFVRGIAVKGGAKFYSRKKIEAMQDYIKRYX 119

Query: 353 QPGLAYIFWRLDESGNVA 370
             GLA++ +   E G+ +
Sbjct: 120 AKGLAWVKY---EDGDFS 134


>gi|450763|emb|CAA40634.1| lysine--tRNA ligase [Saccharomyces cerevisiae]
          Length = 576

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 95/257 (36%), Gaps = 19/257 (7%)

Query: 22  RLSGWVHRVRPHG-GIIFLDIRDHYG--------ITQVVANPDSACFEIAKSVRSEWVLC 72
            ++G +  +R  G  I+F+D  +              V  N      E   +        
Sbjct: 102 SINGRIKSIRFSGQKIVFMDTYNGSSGLKNDTQTQLIVNYNKIGGSSEDKANFSEYMNFL 161

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIE-ILSVAEELPLPVFGEREYPESIRFKYRFL 131
             G  +  +     +        L   K   +LSV++         R   E+     R +
Sbjct: 162 KKGDYIKATGYPGFSQSRVKMTSLMCNKTPMVLSVSQTPLPS----RTNDETKIKSNRVV 217

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGS 190
           D + +      V R RII ++R      NF+E  TP+ +  S+   A+ F+  S+     
Sbjct: 218 DYQLNGTQTTTV-RARIIKTLRKFTDDRNFVEVETPMTSSKSNGAMAKPFMTSSK--DFD 274

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  AP+ + +  M SG  + +++   FR+E   S     EF  L+   +++  DD++
Sbjct: 275 HLELRIAPELWTKRTMISGLQKVYEMGKVFRNEGIDSTHN-AEFSTLEFYETYMSMDDMV 333

Query: 251 NTMENVLRGVFEEFSNG 267
              E++ + +       
Sbjct: 334 TRTEDLFKFLITNLQKF 350



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 11/125 (8%)

Query: 449 EKKIDFAHNPFTMPQ--GGMESLKGNDLL-SIKAFQYDLVCNGFEIASGGIRNHMSEVML 505
           E++   +  P  M      +  L   D        ++++   G E  +     +  ++  
Sbjct: 443 EQRHCQSTLPTVMYHQPAMLSPLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQT 502

Query: 506 QAFSNVGISKEVVENRFGG--------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           Q F+      E+  N+                + GMPP GG   G+DR+ M     K + 
Sbjct: 503 QKFTQQKQINELTGNKTETLSPVIDYQYVETMKYGMPPVGGFGTGMDRLCMTFCDKKRME 562

Query: 558 EVSLF 562
           EV+ F
Sbjct: 563 EVTPF 567


>gi|297808573|ref|XP_002872170.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297318007|gb|EFH48429.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 428

 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 64/168 (38%), Gaps = 7/168 (4%)

Query: 21  VRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
           V +SGWV   R  G     FL++ D      +    D+   +++K V +   L +DG + 
Sbjct: 33  VEISGWVKTGREQGKGSFAFLEVNDGSCAANLQVKVDACVSDVSKLVATGTCLTVDGCLK 92

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
                         +IELSA+K+  +   +    P+   +   E +R  Y     R  T+
Sbjct: 93  IPPEG----KATKQKIELSAEKVIDVGTVDPATYPIPKTKLTLEHLR-DYTNFRARTTTM 147

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
                 R +I           +     TPI+T S  EGA +    + +
Sbjct: 148 AAVTRIRRKITLEAHLFCDEHDICHIHTPIITTSDCEGAGEMFQVTTL 195



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 3/85 (3%)

Query: 190 SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+A         Q      A      +   P FR E   + R   EF+ +++E++F   
Sbjct: 275 DFFARQAFLTVSGQLHAETYACSMGDVYTFGPTFRAEKSHTSRHLAEFWMVEVELAFAGV 334

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS 271
           ++ +N  E +++ +           
Sbjct: 335 EEAMNCAEALVKDICNSLLEKCDDD 359


>gi|76664791|emb|CAJ17835.1| aspartyl-tRNA synthetase [Candidatus Phytoplasma solani]
          Length = 59

 Score =  101 bits (252), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 28/59 (47%), Positives = 41/59 (69%)

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
            PPHGG+A G+DR+VMLL    N+++V  FP +Q+  DL++ SP TV  EQL  L +++
Sbjct: 1   TPPHGGLALGLDRLVMLLTKTNNIKDVIAFPKTQSAKDLMLDSPGTVEKEQLTTLKIKV 59


>gi|47196948|emb|CAF87499.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 142

 Score =  101 bits (251), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 49/144 (34%), Gaps = 3/144 (2%)

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRII 149
             G  EL     E++ +A           +    ++   R + +R + + K +  R+ + 
Sbjct: 2   APGGHELHCDFWELIGLAPAGGADNLLNEDSDVDVQLNNRHMLIRGENVSKILRVRSTVT 61

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
              R    +  + E + P L  +  E        +    G    L Q  Q Y +  +   
Sbjct: 62  QCFRDHFFSRGYYEITPPTLVQTQVEDGYTLFKLNYF--GEQVYLTQCSQLYLETCIP-A 118

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGE 233
               F IA  +R E  R+ R   E
Sbjct: 119 LGDTFCIAQSYRAEQSRTRRHLSE 142


>gi|154305343|ref|XP_001553074.1| hypothetical protein BC1G_08966 [Botryotinia fuckeliana B05.10]
 gi|150853708|gb|EDN28900.1| hypothetical protein BC1G_08966 [Botryotinia fuckeliana B05.10]
          Length = 524

 Score =  100 bits (250), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 65/180 (36%), Gaps = 33/180 (18%)

Query: 390 RLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEE 449
           RL + + D        P +    +  A   +     ++        +I+D          
Sbjct: 19  RLGLGEEDGSI-----PSETEDLSTRAEIRLGA---LVKEKYHTDYYILD---------- 60

Query: 450 KKIDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
            K   +  PF TMP    +    +         +D+   G EI +GG R H +E + +  
Sbjct: 61  -KFPASVRPFYTMPDPEDDRFTNS---------FDIFMRGQEILTGGQRIHDAEFLEKRM 110

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
              G+  E +          F+ G PPH G   G++R+  L L   N+R  SLFP     
Sbjct: 111 KQKGVKPESMSE----YLEGFRWGAPPHAGCGIGLERLTYLFLSLGNIRLASLFPRDPKS 166


>gi|284799900|ref|ZP_06390412.1| lysine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284796561|gb|EFC51908.1| lysine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 214

 Score =  100 bits (250), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 88  GCAESKLWNPTFIIDYP---------------------VEVSPLARASDSKPGLTERFEL 126

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F      K+  ++          RA + G+PP GG  
Sbjct: 127 FVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 186

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 187 IGIDRLVMLLTDSQTIRDVILFPQMR 212


>gi|225076424|ref|ZP_03719623.1| hypothetical protein NEIFLAOT_01469 [Neisseria flavescens
           NRL30031/H210]
 gi|224952272|gb|EEG33481.1| hypothetical protein NEIFLAOT_01469 [Neisseria flavescens
           NRL30031/H210]
          Length = 228

 Score =  100 bits (249), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           G      +   +I+D+P                            + +D       +++L
Sbjct: 102 GCAEGKLWNPTFIVDYP---------------------VEVSPLARASDSKPGLTERFEL 140

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIA 540
              G E+A+G    +  E   + F      K+  ++          RA + G+PP GG  
Sbjct: 141 FVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCG 200

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VMLL  ++ +R+V LFP  +
Sbjct: 201 IGIDRLVMLLTDSQTIRDVILFPQMR 226


>gi|156229920|gb|AAI52078.1| Zgc:154056 protein [Danio rerio]
          Length = 168

 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF            N+     +  YD+   G EI SG  R H ++++ +   +
Sbjct: 60  KYPLAVRPFYTMPD------PNNPK--YSNSYDMFMRGEEILSGAQRIHDAQLLTERAMH 111

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             I  E ++        +F+ G PPH G   G++R+ ML LG  NVR+ S+FP       
Sbjct: 112 HNIDLEEIKA----YIDSFRYGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRDPKRLT 167

Query: 571 L 571
            
Sbjct: 168 P 168


>gi|257487124|ref|ZP_05641165.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 288

 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K++  H     P       + ND       +++L   G EIA+     + +E   + F
Sbjct: 164 EHKLEQPHFITQYPFEVSPLARRNDENPSVTDRFELFIGGREIANAYSELNDAEDQAERF 223

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 K+  ++          RA + GMPP  G   GIDR+VMLL  + ++R+V LFP 
Sbjct: 224 QAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPH 283

Query: 565 SQ 566
            +
Sbjct: 284 MR 285



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 11/124 (8%)

Query: 175 EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
             A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF
Sbjct: 1   AAAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP-EF 58

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRR 285
             L+   ++ + +D ++  E + R + +                    F+R+   D+I +
Sbjct: 59  TMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFVRLSVFDSILK 118

Query: 286 YGTD 289
           Y  D
Sbjct: 119 YNPD 122


>gi|170594375|ref|XP_001901939.1| 60K filarial antigen - nematode [Brugia malayi]
 gi|158590883|gb|EDP29498.1| 60K filarial antigen - nematode, putative [Brugia malayi]
          Length = 491

 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 22/212 (10%)

Query: 101 IEILSVAEELPLPVFG--EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA 158
           +EI    +E+P  +      E         R L +R +     +  R     +MR     
Sbjct: 148 VEIYGTIKEVPEGIDNVLNEEASVDKMLDNRHLVIRGENAAALLRLRAAATRAMREHFYN 207

Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
             ++E + P L  +  EG           + SF  L Q+ Q Y +  + +     F IA 
Sbjct: 208 AGYVEVAPPTLVQTQVEGGSPLFNLDYFGEQSF--LTQSSQLYLETCIPT-LGDVFCIA- 263

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS------------- 265
             + E  R+ R   E+  ++ E  F+  DD++  +E ++    +                
Sbjct: 264 --QAEKSRTRRHLAEYAHVEAECPFITLDDLMEKIEELVCDTVDRLLADEEAKKLLKHIN 321

Query: 266 -NGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
                    FLR+ Y DAI+            
Sbjct: 322 PKFQRPKRPFLRMEYKDAIKWLQEHNVQNEFG 353



 Score = 67.8 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 13/116 (11%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAF 508
            +       F M +   ++     +        DL+  G  EI  G +R    + + +AF
Sbjct: 381 NRFPSEIKAFYMQKDAHDNTLTESV--------DLLMPGVGEIVGGSMRVWKFDELSKAF 432

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            NV I  +     +         G  PHGG   G++R +  L    ++R+V  +P 
Sbjct: 433 KNVEIDPKP----YYWYLDQRLYGTCPHGGYGLGLERFICWLTNTNHIRDVCFYPR 484


>gi|331009251|gb|EGH89307.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 287

 Score =  100 bits (248), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K++  H     P       + ND       +++L   G EIA+     + +E   + F
Sbjct: 163 EHKLEQPHFITQYPFEVSPLARRNDENPSVTDRFELFIGGREIANAYSELNDAEDQAERF 222

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 K+  ++          RA + GMPP  G   GIDR+VMLL  + ++R+V LFP 
Sbjct: 223 QAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPH 282

Query: 565 SQ 566
            +
Sbjct: 283 MR 284



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 11/123 (8%)

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
            A+ F           + L  AP+ Y + L+  GF++ F+I   FR+E   +   P EF 
Sbjct: 1   AAKPFETHHNALDMEMF-LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNP-EFT 58

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRY 286
            L+   ++ + +D ++  E + R + +                    F+R+   D+I +Y
Sbjct: 59  MLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFVRLSVFDSILKY 118

Query: 287 GTD 289
             D
Sbjct: 119 NPD 121


>gi|42560967|ref|NP_975418.1| aspartate-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|42492464|emb|CAE77060.1| Aspartate-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320475|gb|ADK69118.1| aspartate--tRNA ligase domain protein [Mycoplasma mycoides subsp.
           mycoides SC str. Gladysdale]
          Length = 100

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/81 (33%), Positives = 43/81 (53%)

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
               R  +A+   +   N F+  W++DFP +E++E+E++   AH+PFTM +         
Sbjct: 1   MGSIRVELAKMFNLAYPNEFKLLWVVDFPLFEYSEKEQRYLAAHHPFTMTKPESLDTFDV 60

Query: 473 DLLSIKAFQYDLVCNGFEIAS 493
           +     A+ YDLV NGFEI  
Sbjct: 61  NKKDAIAYAYDLVMNGFEIGG 81


>gi|256068907|ref|XP_002570964.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238651840|emb|CAZ38649.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 80

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 42/76 (55%)

Query: 521 RFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
                  A   G PPHGGIA G+DR++ + + AK++R+V  FP + +  DLL G+P+ V 
Sbjct: 5   EMEYFLTALNSGTPPHGGIALGLDRLIAIFVNAKSIRDVIAFPKAADGKDLLCGTPTMVD 64

Query: 581 VEQLRELGLRIVENPK 596
            E L +  + +    K
Sbjct: 65  DEILSQYCISVSNLNK 80


>gi|73984265|ref|XP_856761.1| PREDICTED: similar to Aspartyl-tRNA synthetase (Aspartate--tRNA
           ligase) (AspRS) isoform 3 [Canis familiaris]
          Length = 382

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 37/180 (20%)

Query: 406 PLKFCSFAADAR---NHIAQE----------LGIINCNCFEFCWIMDFPFYEWNEEEKKI 452
            L++C   A  R     +  E          LG +    ++     DF   +      K 
Sbjct: 226 RLEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYD----TDFYILD------KY 275

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
             A  PF             D  + K +  YD+   G EI SG  R H  +++ +   + 
Sbjct: 276 PLAVRPFYTM---------PDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHH 326

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP        
Sbjct: 327 GIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 382



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 26/174 (14%)

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-----DDILNTM 253
           QQ KQ+ + + F++ F I P FR ED  + R   EF  LD+EM+F        ++I +T+
Sbjct: 132 QQDKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVVEEIADTL 191

Query: 254 ENVLRGVFEEFS------NGNTVSNNF------LRICYDDAIRRY------GTDKPDLRN 295
             + +G+ + F       N       F      LR+ Y +A+           D+ DL  
Sbjct: 192 VQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLREAGIEMGDEEDLST 251

Query: 296 PII--MHNVTEHFVHSEFRVFSK-ILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           P    +  + +    ++F +  K  L+V P Y +          +     R  E
Sbjct: 252 PNEKLLGRLVKEKYDTDFYILDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEE 305



 Score = 46.2 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 53/169 (31%), Gaps = 19/169 (11%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH----YGITQVVANPDSACFEIAKS 64
             DL V      V +   VH  R  G   FL +R        +  V  +      + A +
Sbjct: 48  VSDLTVHKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAAN 107

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELP-LPVFGEREYPE- 122
           +  E ++ ++G+V   + +  +      Q+ + A   ++  +            R   E 
Sbjct: 108 INKESIVDVEGVVRKVNQKIGSCTQQDKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEF 167

Query: 123 -----SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
                 + F Y +        H+ + +    +  +   +      E  T
Sbjct: 168 VGLDIEMAFNYHY--------HEVVEEIADTLVQIFKGLQKRFQTEIQT 208


>gi|76156709|gb|AAX27860.2| SJCHGC04622 protein [Schistosoma japonicum]
          Length = 180

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 4/102 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
             +      +  YD    G EI  G  R H    + +  ++  +       +      AF
Sbjct: 83  MPHPTDKGYSNSYDFFMRGKEIMFGAQRIHDPVFLAERATHHKVDL----EKIKAYIDAF 138

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           + G PPH G   G++R+ ML LG  N+R+ S+FP        
Sbjct: 139 RYGCPPHAGGGIGLERVTMLFLGLDNIRKTSMFPRDPKRLTP 180


>gi|289812204|ref|ZP_06542833.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 309

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 77/239 (32%), Gaps = 45/239 (18%)

Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA-----------------PQQYKQL 204
              STP++TAS  EGA +    S ++  +     Q                    Q    
Sbjct: 1   FWVSTPLITASDTEGAGEMFRVSTLDLENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGE 60

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
             A    + +   P FR E+  + R   EF+ L+ E++F + +D     E +L+ VF+  
Sbjct: 61  TYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFADLEDNARLAEAMLKYVFKAV 120

Query: 265 SN---------------------GNTVSNNFLRICYDDAIRRYGTDKPDLRNPI-IMHNV 302
                                     VS +F ++ Y DA+           NP+    ++
Sbjct: 121 LEERADDMKFFAERVDKDAIARLERFVSTDFAQVDYTDAVAILERCGKTFENPVFWGVDL 180

Query: 303 -TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
            +EH  +     F   + V    +            R   D     A     PG+  I 
Sbjct: 181 SSEHERYLAEEHFKAPVVVKNYPKEI-----KAFYMRLNEDGKTVAAMDVLAPGIGEII 234



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++K      +      
Sbjct: 213 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDL 266

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 267 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 305


>gi|238603310|ref|XP_002395912.1| hypothetical protein MPER_03947 [Moniliophthora perniciosa FA553]
 gi|215467470|gb|EEB96842.1| hypothetical protein MPER_03947 [Moniliophthora perniciosa FA553]
          Length = 91

 Score = 97.8 bits (242), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 4/95 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPH 536
             +  YD    G EI SG  R H  +V+ +     G+  E +     G   AF+ G PPH
Sbjct: 1   TLSNSYDFFMRGEEILSGAQRIHDPKVLAEKMRAKGVDPESM----TGYMDAFRMGCPPH 56

Query: 537 GGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           GG   G++R++ML L   N+R  SLFP      + 
Sbjct: 57  GGGGIGLERVLMLFLKLNNIRRASLFPRDPKRLEP 91


>gi|295664859|ref|XP_002792981.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226278502|gb|EEH34068.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 410

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 73/188 (38%), Gaps = 25/188 (13%)

Query: 384 TEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCW-IMD-F 440
            +   +RL   DG +    AG D  +   F  D    + ++LG I    ++  + ++D F
Sbjct: 242 KDGKALRLKYMDGVALLKEAGVDVSEQEKFENDLTTAMEKQLGRIIRQKYDTDFYVLDKF 301

Query: 441 PFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           P             A  PF             D     +  YD    G EI SG  R + 
Sbjct: 302 PM------------AVRPFYTKAC------PQDP--TFSNSYDFFMRGEEIMSGAQRIND 341

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           ++ +  A    G++    +  F     AF+ G P H G   G++RIVM  LG  N+R  +
Sbjct: 342 AKELEAAMFAKGLNPN--DEGFEDYIGAFRQGCPLHAGGGLGLNRIVMFFLGLPNIRLAT 399

Query: 561 LFPMSQNF 568
           LFP     
Sbjct: 400 LFPRDPQR 407


>gi|213585320|ref|ZP_03367146.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 100

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 49/103 (47%), Positives = 69/103 (66%), Gaps = 3/103 (2%)

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           +KQLLM SGFDRY+QI  CFRDED R+DR P EF Q+D+E SF+    +   ME ++R +
Sbjct: 1   FKQLLMMSGFDRYYQIVKCFRDEDLRADRQP-EFTQIDVETSFMTAPQVREVMEALVRHL 59

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + E    +    +F  + + +A RRYG+DKPDLRNP+ + +V 
Sbjct: 60  WLEVKGVD--LGDFPVMTFAEAERRYGSDKPDLRNPMELVDVA 100


>gi|13752518|gb|AAK38703.1|AF359587_1 aspartyl-tRNA synthetase [Oryzias latipes]
          Length = 95

 Score = 97.4 bits (241), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 4/93 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+   G EI SG  R H ++++ +   +  I       +      +F+ G PPH G
Sbjct: 7   SNSYDMFMRGEEILSGAQRVHDAQLLTERAQHHQIDL----EKIKSYIDSFRYGAPPHAG 62

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
              G++R+ ML LG  NVR+ S+FP        
Sbjct: 63  GGIGLERVCMLYLGLHNVRQTSMFPRDPKRLTP 95


>gi|71408438|ref|XP_806623.1| aspartyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70870422|gb|EAN84772.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 261

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 13/119 (10%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
             A   +TMP    E    +         YD+   G EI+SG  R H S ++L+   ++G
Sbjct: 156 TAARPFYTMPFPDDERFTNS---------YDMFIRGEEISSGAQRIHDSSLLLKRAQSLG 206

Query: 513 ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +    +++       +F+ G  PHGG   G++R+VML LG  NVR VSLFP        
Sbjct: 207 VDLSPIKD----YVDSFRLGAWPHGGFGVGLERVVMLYLGLSNVRLVSLFPRDPQRVTP 261



 Score = 39.7 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEFSNGNTVSNNFLRICY 279
           R E+  + R   EF  LD+EM   E   ++L+T E +   +F + +          R   
Sbjct: 1   RAENSNTHRHLTEFVGLDVEMRINEHYYEVLDTAEELFCYMFAQLAKHTGELEAICRQYP 60

Query: 280 DDAIRR 285
            + +  
Sbjct: 61  FEPLLW 66


>gi|294893115|ref|XP_002774338.1| aspartyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239879676|gb|EER06154.1| aspartyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 257

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   +  PF      ++    N         YD+   G E+ SG  R H ++++ +    
Sbjct: 149 KFPASVRPFYTMPDPVDPKWTN--------SYDIFIRGEEVTSGAQRIHDADMLAEKAQR 200

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
           +G+    ++        AF+ G  PH G   G++R+VML LG  N+R VS+FP       
Sbjct: 201 LGVELSTIQP----YVDAFKYGSYPHAGAGVGLERVVMLFLGLPNIRLVSMFPRDPKRLT 256

Query: 571 L 571
            
Sbjct: 257 P 257


>gi|316979807|gb|EFV62542.1| asparagine--tRNA ligase [Trichinella spiralis]
          Length = 392

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 93/332 (28%), Gaps = 70/332 (21%)

Query: 7   HSCGDLGVSD-VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
            +   L      G  V + GWV   R +    F+ I D      +               
Sbjct: 12  KTIAQLAKEKPTGQAVTVKGWVKHFRSYKNFTFMHISDGLSAALLQVVIPEPL------- 64

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
                    G  ++   E   +      +EL A          +       +R+ P+++R
Sbjct: 65  --NNSHVTVGSAVAVEGELNPSVGPEQHLELVAT---------QNFPFSVRQRQSPDTLR 113

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
                  LR  T     + R RI                    LTA+  E A D     +
Sbjct: 114 Q---HEHLRPKTRSFAALLRIRI--------------------LTANDCEAAGDVFTAEK 150

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           V                         + +   P FR E   + +   EFY L++E +F  
Sbjct: 151 V-------------------------KVYTFNPAFRAESSLTRQHLAEFYMLEVEQAFCT 185

Query: 246 Q-DDILNTMENVLRGVFEEFSNGNTVSNNF-LRICYDDAIRRYGTDKPDLRNP-IIMHNV 302
             +D++  +EN++    +   + +        +     A       +     P I     
Sbjct: 186 SLEDLMKLVENLILNCIKTVMHESVEDLKICQQYHQTVAFDDLCRIEKLSSFPRITFVEA 245

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           TE   +S       +  +    E + +   G 
Sbjct: 246 TEILQNSNKNFSKNLKHLRKEDERFLVQHFGN 277



 Score = 47.8 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 28/135 (20%)

Query: 422 QELGIINCNCFEFCWIMDF---PFY--EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
           + L  +      F  +  F   P +  E+  E K       PF M +            +
Sbjct: 258 KNLKHLRKEDERFL-VQHFGNLPLFVTEYPAETK-------PFYMKRNQD---------N 300

Query: 477 IKAFQYDL-VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPP 535
             A  +DL V +  E+  G +R    +++      + I+++             + G P 
Sbjct: 301 TCALCFDLLVPHSGELCGGSLRECNLDILSHRMELLKIAEQS-----QWYSELRKFGYPD 355

Query: 536 HGGIAAGIDRIVMLL 550
            GG   G +R++ L 
Sbjct: 356 LGGFGLGFERLLQLY 370


>gi|257439881|ref|ZP_05615636.1| aspartyl-tRNA synthetase [Faecalibacterium prausnitzii A2-165]
 gi|257197694|gb|EEU95978.1| aspartyl-tRNA synthetase [Faecalibacterium prausnitzii A2-165]
          Length = 179

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 76/175 (43%), Gaps = 19/175 (10%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIA 62
           RT    ++    +G+ V++ G++  +R    + F+ ++D  G  Q+    +         
Sbjct: 3   RT-YINEVQKE-IGNTVKVQGFIENLRNSKYMAFIVLKDITGKLQITVEKEDHPDLVGTI 60

Query: 63  KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE----- 117
             +  + V+ + G V+       N  +  G IE+  + IE+ S+A+ LP+          
Sbjct: 61  DQLTPDSVITVTGKVVE------NDYVKMGGIEMIPEAIEVESIADALPIARKAIAATKK 114

Query: 118 ----REYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI 168
                      R  YR++DLR D        ++ ++N+MR  ++ +NFIE  TP 
Sbjct: 115 KKAVERSSIDQRIDYRWVDLRTDENQLMFKAQSCMVNAMRKFLLDQNFIEIHTPN 169


>gi|67624609|ref|XP_668587.1| aspartate-tRNA ligase F10M23.210 [Cryptosporidium hominis TU502]
 gi|54659782|gb|EAL38345.1| aspartate-tRNA ligase F10M23.210 [Cryptosporidium hominis]
          Length = 82

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
             G EI SG  R H  +++++     G+S+  + +       +F+ G PPHGG   G++R
Sbjct: 1   MRGEEILSGAQRVHDYDLLVKRCQECGVSEHSLRD----YLNSFKLGAPPHGGCGIGLER 56

Query: 546 IVMLLLGAKNVREVSLFPMSQNFCDL 571
           ++ML L   N+R+ S+FP        
Sbjct: 57  VIMLFLNLGNIRKSSMFPRDPKRLSP 82


>gi|213028495|ref|ZP_03342942.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 163

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 51/151 (33%), Gaps = 5/151 (3%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V   V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDQEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEEV----LHLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A K+E+    E+        + +      +   L  R 
Sbjct: 72  CSVVVTGKVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECST 166
           + +      R  +  ++      + F   ST
Sbjct: 132 NLIGAVARVRHTLAQALHRFFDEQGFFWVST 162


>gi|163785086|ref|ZP_02179800.1| lysyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879644|gb|EDP73434.1| lysyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 238

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 70/172 (40%), Gaps = 9/172 (5%)

Query: 397 DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH 456
           D+     G   +F      AR+  A+E+GI   +      I+D   +E   EE  I    
Sbjct: 65  DALKEKTGKDKEFFLDEEKARD-FAKEVGIQKADELTHSKILDK-LFEHFIEEDLIQPTF 122

Query: 457 NP-FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
              F      +     ND   +   +++L+ N  EIA+     +  E   + F      K
Sbjct: 123 VIDFPKILSPLAKTHRNDPDLV--ERFELIVNKKEIANAYTELNDPEDQKERFLQQLKEK 180

Query: 516 EVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              ++           A + G+PP  G   GIDR+VM+L+   ++REV LFP
Sbjct: 181 AQGDDEAMEIDENFLMALEYGLPPTAGEGIGIDRLVMMLVDTPSIREVILFP 232



 Score = 43.5 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/122 (9%), Positives = 33/122 (27%), Gaps = 12/122 (9%)

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            +   P EF  ++   ++++ +D++   E +LR +  +                      
Sbjct: 2   DTTHNP-EFTMVEFYAAYLDYNDLMEITEELLRKILLDTVG-----------TLKITWEG 49

Query: 286 YGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
              D       +   +  +     +   F          +   I       +    D++ 
Sbjct: 50  QELDFEKPFRRLAFFDALKEKTGKDKEFFLDEEKARDFAKEVGIQKADELTHSKILDKLF 109

Query: 346 EW 347
           E 
Sbjct: 110 EH 111


>gi|308273517|emb|CBX30119.1| hypothetical protein N47_D29280 [uncultured Desulfobacterium sp.]
          Length = 313

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 17/165 (10%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFY 192
           R+  + KN+  R+ II  +R     +N++E  TP  ++A +PE   + +          Y
Sbjct: 13  RQTHIKKNLQLRSEIIQLIRLFFSEQNYLEVETPCRISAPAPEAYIEAIESEN------Y 66

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+ Y + L++SG+ + FQI  CFR  +  +  +P EF  L+      +   ++N 
Sbjct: 67  FLQTSPELYMKRLISSGYPKIFQICRCFRQNERGAKHIP-EFTMLEWYCINSDYFYMMNE 125

Query: 253 MENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRYGT 288
            E +++ V  +    N         ++   + RI   +A  +Y  
Sbjct: 126 CEALIKYVACKLGFENSIIYQGESISIDKPWNRITVSEAFDKYAC 170



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 25/132 (18%)

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
            D P + ++            +    G +  LK +D  ++ A +++L  +G E+ +    
Sbjct: 195 TDVPTFIYD------------YPASCGALAKLKSSD--NLLAERFELYISGIELCNAFTE 240

Query: 498 NHMSEVMLQAFSNV-------GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
               E   + F          G+ K  +  +F     +    MP   G A G+DR+VML 
Sbjct: 241 LTDPEEQRKRFEKELEHRKKAGLKKYPMPEKF---LESLSY-MPKTSGNALGLDRLVMLF 296

Query: 551 LGAKNVREVSLF 562
              + + +V  F
Sbjct: 297 ADTEIIDDVVAF 308


>gi|90077058|dbj|BAE88209.1| unnamed protein product [Macaca fascicularis]
          Length = 246

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 12/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                  ++  YD+   G EI SG  R H  +++ +   +
Sbjct: 138 KYPLAVRPFYTMPD--------PRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERTLH 189

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI       +      +F+ G PPH G   G++R+ ML LG  NVR+ S+FP       
Sbjct: 190 HGIDL----EKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLT 245

Query: 571 L 571
            
Sbjct: 246 P 246



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 26/169 (15%)

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-----DDILNTMENVLR 258
           + + + F++ F I P FR ED  + R   EF  LD+EM+F        ++I +TM  + +
Sbjct: 1   MCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFK 60

Query: 259 GVFEEFS------NGNTVSNNF------LRICYDDAIRRY------GTDKPDLRNPII-- 298
           G+ E F       N       F      LR+ Y +A+           D+ DL  P    
Sbjct: 61  GLQERFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLREAGVEMGDEDDLSTPNEKL 120

Query: 299 MHNVTEHFVHSEFRVFSK-ILSVNPGYEVWAIPAKGGGGNRAFCDRMNE 346
           + ++ +    ++F +  K  L+V P Y +          +     R  E
Sbjct: 121 LGHLVKEKYDTDFYILDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEE 169


>gi|221057165|ref|XP_002259720.1| asparagine--t RNA ligase [Plasmodium knowlesi strain H]
 gi|193809792|emb|CAQ40496.1| asparagine--t RNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 727

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 96/366 (26%), Gaps = 109/366 (29%)

Query: 5   RTHSCGDLGVS---DVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDS--A 57
           RT     LG       G    + GWV  +R  G     F+DI D   +  +    DS   
Sbjct: 173 RTKIKDILGAQVTHREGQKYTVCGWVKSIRTVGKNRFSFIDINDGSHVKNLQVVIDSGIP 232

Query: 58  CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL----- 112
            +     +  +  +   G +           +     E  A  +++L   +         
Sbjct: 233 NYGQISRLLRDDAVECVGELKGSLGRKQQVELCVQAAE-KAHYVKLLGKLDGGVDVGEET 291

Query: 113 -------PVFGEREYPESIRFK-------------------------------------- 127
                     G+ +  E    +                                      
Sbjct: 292 NDRGLGEKGSGDVDVGEETNDRGLGEKGTGDVGVGEKGSGDGGLRSSPSKHYAISKKYHT 351

Query: 128 YRFL----DLRRDTLHKNIVKRTR--IINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
              L     LR  T   + V R +  I+         +N    +TP+LT++  EGA    
Sbjct: 352 KEHLRCFPHLRARTKLYSSVFRLKSDIVTETFNFWREKNCTYINTPVLTSNDCEGAGKLF 411

Query: 182 ---------------VPSRVNQG---------------------------SFYALP---Q 196
                               + G                            F+  P    
Sbjct: 412 HATTLMSQVNHRGEHTNVNFHDGYDTDEGCKREVQKEEGYPHEGNNPFARDFFKKPCYLN 471

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
              Q     +       F +  CFR E+  + R   EF  +++E++F     I++  E  
Sbjct: 472 VSSQLALECLCCSMGDVFTLNQCFRAENSNTVRHLSEFLMMEVELAFCNLSSIISIAEEY 531

Query: 257 LRGVFE 262
           ++ + +
Sbjct: 532 IKAMIK 537



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 50/165 (30%), Gaps = 27/165 (16%)

Query: 405 DPLKFCSFAADAR---NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
                 +     R     + ++  + + +      ++++P                PF M
Sbjct: 582 KKNMVRTDELPVRTTDLTLEEQKFLTDMHFRSPVVVINYP------------QNMKPFYM 629

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR 521
                            A    L+    E+  G  R      + +      +  ++ E  
Sbjct: 630 NLNED--------GKTVACMDILLPEVGEVVGGSEREIRIHTLERRMKEKRLDLQLYEP- 680

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                   + G  PH G   G+DR++M +    N+R+V  FP + 
Sbjct: 681 ---YLELRRYGNIPHAGFGLGMDRLIMFITSMVNIRDVVPFPRAP 722


>gi|124801179|ref|XP_001349624.1| asparagine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|3845207|gb|AAC71894.1| asparagine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 610

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 64/200 (32%), Gaps = 11/200 (5%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACF 59
             Y  ++   +    +G  + + GW   +R  GG    F+++ D      +    +    
Sbjct: 72  KEYNNNNSDKVENKYIGKIITVCGWSKAIRKQGGGRFCFVNLNDGSCHLNLQIVVNQCIE 131

Query: 60  EIAKSVRSE--WVLCIDGLVMSRSAETINAN--IITGQIEL-----SAQKIEILSVAEEL 110
              K ++          G ++    +  N    ++   +EL          EI     + 
Sbjct: 132 NYEKLLKCGAGCCFRFTGELIISPVQNDNNKKGLLKENVELALNNNDIHNFEIYGENLDP 191

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                 ++ + +    +   L  R   +   I  R  +  +      +  F+   TP++T
Sbjct: 192 QKYPLSKKNHGKEFLREVAHLRPRSYFISSVIRIRNSLSIATHLFFQSRGFLYIHTPLIT 251

Query: 171 ASSPEGARDFLVPSRVNQGS 190
            S  EG  +    + +   +
Sbjct: 252 TSDCEGGGEMFTVTTLLNEN 271



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 59/186 (31%), Gaps = 36/186 (19%)

Query: 187 NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            +  F+   A      Q     + S     +   P FR E+  + R   EF+ ++ E++F
Sbjct: 341 YKKDFFSKQAFLTVSGQLSLENLCSSMGDVYTFGPTFRAENSHTSRHLAEFWMIEPEIAF 400

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNN---------------------FLRICYDDA 282
            +  D +   E  ++   +   N N                          F +I Y +A
Sbjct: 401 ADLYDNMELAEAYIKYCIDYVLNNNFHDIYYFEENVETNLIKRLKNILNEDFAKITYTNA 460

Query: 283 IRRYGTDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
           I             +   M   +EH      ++F K + V    +            +AF
Sbjct: 461 IEILQNYSDSFEVKVEWGMDLQSEHERFIAEKIFKKPVIVYNYPKDL----------KAF 510

Query: 341 CDRMNE 346
             ++NE
Sbjct: 511 YMKLNE 516



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    E+  G  R    E + +      ++     + +    +  Q G  PH G   G 
Sbjct: 527 LVPKIGEVIGGSQREDNLERLDKMIKEKKLNI----DSYWWYRQLRQYGSHPHAGFGLGF 582

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R++ML+ G  N+++   FP 
Sbjct: 583 ERLIMLVTGVDNIKDTIPFPR 603


>gi|308810651|ref|XP_003082634.1| SYNO_ARATH Asparaginyl-tRNA synthetase, chloroplast/mitochondrial
           precursor (ISS) [Ostreococcus tauri]
 gi|116061103|emb|CAL56491.1| SYNO_ARATH Asparaginyl-tRNA synthetase, chloroplast/mitochondrial
           precursor (ISS) [Ostreococcus tauri]
          Length = 557

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 67/187 (35%), Gaps = 20/187 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
           G S +G  + L      VR   GI F+D+ D   +T + A        +       W L 
Sbjct: 57  GASRIGETLELRRLARSVRTPKGIAFIDLNDGSAMTGIQA--------VVSEGSGAWALA 108

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
             G    + A            EL+  ++EI+  A+    P+  +R   E +R     L 
Sbjct: 109 NSGAPGGKQAA-----------ELAVDELEIIGGADPETYPLQKKRHTLEYLR-SIAHLR 156

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
            R +T+      R  +  +         F+   TPI+TAS  EGA +    + +  G   
Sbjct: 157 PRTNTIGAVARVRNELAYATHNFFQQNGFLYVHTPIITASDCEGAGEQFQVTTLLSGLDA 216

Query: 193 ALPQAPQ 199
                P 
Sbjct: 217 GSATTPG 223



 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 47/154 (30%), Gaps = 27/154 (17%)

Query: 190 SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+          Q    +MA   +  +   P FR E+  + R   EF+ ++ E++F + 
Sbjct: 289 DFFGKRSYLTVSGQLNGEIMACAVNDVYTFGPTFRAENSNTSRHLAEFWMVEPELAFADL 348

Query: 247 DDILNTMENVLRGVFEEFSNGNTVS----------------------NNFLRICYDDAIR 284
            D ++  E  L+                                     F+RI Y +A+ 
Sbjct: 349 KDDMDCAEAYLKYCLNHVLEHCDEDLAFFEANISKDNLRERLRNVASQEFVRITYTEAVE 408

Query: 285 RYGTDKPDLRNPIIMHN--VTEHFVHSEFRVFSK 316
                      P    +   +EH  +    VF  
Sbjct: 409 HIQKATKKFEFPCEWGSDLQSEHERYISEEVFKD 442



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 4/93 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+ +     G+ K      +       + 
Sbjct: 462 NDDNKTVAAMDVLVPRVGELMGGSQREERLDVLERRIEENGLEK----EAYWWYLDLRRY 517

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G  PH G   G +R+V  + G +N+R+   FP 
Sbjct: 518 GSQPHAGFGLGFERLVQYVTGVENIRDAIPFPR 550


>gi|46202611|ref|ZP_00052922.2| COG0173: Aspartyl-tRNA synthetase [Magnetospirillum
          magnetotacticum MS-1]
          Length = 94

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/79 (49%), Positives = 51/79 (64%)

Query: 1  MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
          MH YR+H+CG L  SD G   RLSGWVHR R HG ++F+D+RDHYG+TQ V +  S  F 
Sbjct: 16 MHVYRSHTCGQLKASDAGIQARLSGWVHRKRDHGNLLFVDLRDHYGLTQCVIDISSPVFA 75

Query: 61 IAKSVRSEWVLCIDGLVMS 79
            +  R E V+ + G V+ 
Sbjct: 76 TLEKARPESVITVTGKVVK 94


>gi|76156228|gb|AAX27451.2| SJCHGC05902 protein [Schistosoma japonicum]
          Length = 324

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 71/202 (35%), Gaps = 18/202 (8%)

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                +   R L +R +   K +   +  + + R   I   ++E        +  EG   
Sbjct: 1   SDIDTQLDNRHLVIRGENTAKVLRLISIALAAFRGHYIDRGYVEVLPGAFVQTQVEGGST 60

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               +   + +F +  Q+ Q Y +  +       F I   +R E  R+ R   E+  ++ 
Sbjct: 61  LFSLNYFGETAFMS--QSSQLYLETCIP-AIGDCFCITRSYRAEKSRTRRHLSEYNHVEA 117

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSN------------GNTVSNNFLRICYDDAI---R 284
           E  F++ + +LN +E+++  V +                       F R+ Y+DAI    
Sbjct: 118 ECPFIDFNGLLNRIEDLVVDVCDRIVKQSGDLLLDVNPQFKPPKGPFKRLKYEDAIVQLN 177

Query: 285 RYGTDKPDLRNPIIMHNVTEHF 306
             G    DL       ++ E  
Sbjct: 178 NLGITNEDLTPFQFGDDIPEAP 199



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 5/90 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  E+  G +R    + +L+ + +  I        +       + G  PHGG   
Sbjct: 239 DLLVPGVGELVGGSMRMDNIDDLLKGYKSEEIDPTP----YYWYTDQRKFGTCPHGGYGL 294

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G +R    LLG  ++R+V L+P   + C  
Sbjct: 295 GFERFCTWLLGKDHIRDVCLYPRFTSRCRP 324


>gi|323972625|gb|EGB67828.1| hypothetical protein ERHG_01368 [Escherichia coli TA007]
          Length = 98

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAK 63
          RT  CG L +S VG  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A 
Sbjct: 2  RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLAS 61

Query: 64 SVRSEWVLCIDGLVMSRSAE 83
           +R+E+ + + G V +R  +
Sbjct: 62 ELRNEFCIQVTGTVRARDEK 81


>gi|145608522|ref|XP_370051.2| hypothetical protein MGG_06566 [Magnaporthe oryzae 70-15]
 gi|145015992|gb|EDK00482.1| hypothetical protein MGG_06566 [Magnaporthe oryzae 70-15]
          Length = 515

 Score = 94.4 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 83/263 (31%), Gaps = 79/263 (30%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
             V + G+V  VR      F+ + D   I  + A       + A  +     + + G  +
Sbjct: 61  QNVIVDGYVRSVRSMKTASFVSLGDGSCIAPLQA---IVPVDQADGLSVGAAVRLTGSWV 117

Query: 79  SRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL 138
           S               EL  Q+++++  ++    P                         
Sbjct: 118 SSPGRGQTH-------ELRVQEVQVVGPSDAKTHP------------------------- 145

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS-------- 190
                                       P++T+S  EGA +       + G         
Sbjct: 146 ----------------------------PVVTSSDCEGAGEVFEVLPASDGQISTEGVQK 177

Query: 191 ----FY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               F+          Q     +A      + ++P FR E   + R   EFY ++ EMSF
Sbjct: 178 STQPFFDSQKYLTVSAQLHLEALAQSVGNVWTLSPTFRAEKSDTPRHLSEFYMMEAEMSF 237

Query: 244 VEQDD-ILNTMENVLRGVFEEFS 265
           VE  D +++ +E++LR   +E S
Sbjct: 238 VESMDTVMDLVEDLLRFATKELS 260



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 57/174 (32%), Gaps = 41/174 (23%)

Query: 433 EFCWIMDFP-------FYEWNEEEKK--IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           +  ++  +P         +      K     + +  T       +     +       +D
Sbjct: 346 KPVFVTHYPRDLKAFYMLQSASATGKAGTSASFSAGTSRSDPEATTLRETVD-----CFD 400

Query: 484 L-VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE----------------------- 519
           L V +  EIA G +R H  + +L    + G+  +V +                       
Sbjct: 401 LLVPDLCEIAGGSMREHRLQPLLGVMQSRGMVPQVSDVGSSSLASRGDGDSDPVSNTTDA 460

Query: 520 ---NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
                        + G PPHGG   G DR++  L G +++R++  FP     CD
Sbjct: 461 QHAGALDWYVDLRRWGCPPHGGFGIGFDRLLCYLSGVQSIRDIVAFPRWYGRCD 514


>gi|330722514|gb|EGH00336.1| Lysyl-tRNA synthetase (class II) [gamma proteobacterium IMCC2047]
          Length = 251

 Score = 94.4 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 7/163 (4%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           +    AR  +A  L I   + +    +     +E   E  ++D        P       +
Sbjct: 92  NDLGSAR-EVATGLEIPLKDSWGLGKV-QIEIFEKTVE-HRLDQPTFITEYPAEVSPLAR 148

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----Y 526
            +D       +++    G EIA+G    + +E   + F      K+  ++          
Sbjct: 149 RSDTDHHVTDRFEFFVGGREIANGFSELNDAEDQAERFRAQVAEKDAGDDEAMHYDEDYV 208

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            A + G+PP  G   GIDR+VML   + ++R+V LFP  +   
Sbjct: 209 TALEYGLPPTAGEGIGIDRLVMLFTDSPSIRDVLLFPHMRRSS 251



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 10/82 (12%)

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           F+I   FR+E   +   P EF  L+   ++ + +D++N  E++LR V +E      V   
Sbjct: 2   FEINRNFRNEGLSTRHNP-EFTMLEFYQAYADYNDLMNLTEDMLRHVAQEVLGTTKVHYQ 60

Query: 274 ---------FLRICYDDAIRRY 286
                    F R+   ++I  +
Sbjct: 61  GSDYDFGQPFQRMSVVESILHF 82


>gi|194432221|ref|ZP_03064509.1| lysyl-tRNA synthetase, heat inducible [Shigella dysenteriae 1012]
 gi|194419424|gb|EDX35505.1| lysyl-tRNA synthetase, heat inducible [Shigella dysenteriae 1012]
          Length = 258

 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 76  PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 130

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 131 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 178

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 179 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 238

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 239 FTNSHTIRDVILFPAMR 255


>gi|289766705|ref|ZP_06526083.1| lysyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289718260|gb|EFD82272.1| lysyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 229

 Score = 94.0 bits (232), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + +  D  +    +++L  N  E A+     +  
Sbjct: 98  FFEQKCEEKVIQPTFVYGHPVEISPLAKRNEDNPNF-TDRFELFINKREYANAFTELNDP 156

Query: 502 EVM-----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                    Q    +  ++E           A + GMPP GG+  GIDR+VMLL G+ ++
Sbjct: 157 ADQRGRFEAQVEEALRGNEEATPVIDEDYVEALEYGMPPTGGMGIGIDRLVMLLTGSPSI 216

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 217 RDVILFPQMK 226


>gi|194378294|dbj|BAG57897.1| unnamed protein product [Homo sapiens]
          Length = 287

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 62/166 (37%), Gaps = 10/166 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V   +         + +E  + + G+
Sbjct: 125 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGM 184

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 185 LNLTPKG----KQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 240

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            + K +  R+ +    R       + E S       S   A++   
Sbjct: 241 NMSKILKARSMVTRCFRDHFFDRGYYEVSMH-----SSAFAKNMFF 281


>gi|256028802|ref|ZP_05442636.1| lysyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 242

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + +  D  +    +++L  N  E A+     +  
Sbjct: 111 FFEQKCEEKVIQPTFVYGHPVEISPLAKRNEDNPNF-TDRFELFINKREYANAFTELNDP 169

Query: 502 EVM-----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                    Q    +  ++E           A + GMPP GG+  GIDR+VMLL G+ ++
Sbjct: 170 ADQRGRFEAQVEEALRGNEEATPVIDEDYVEALEYGMPPTGGMGIGIDRLVMLLTGSPSI 229

Query: 557 REVSLFPMSQ 566
           R+V LFP  +
Sbjct: 230 RDVILFPQMK 239



 Score = 40.4 bits (93), Expect = 0.83,   Method: Composition-based stats.
 Identities = 8/87 (9%), Positives = 32/87 (36%), Gaps = 6/87 (6%)

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP- 291
           EF  +++  +  + +D+++  E ++  + E+ +    +  + +++   +  R +  D   
Sbjct: 11  EFTMIELYQAHADFNDMMDIAEGMISTICEKINGTTDIVYDGVQLSLKNFKRVHMVDMIK 70

Query: 292 -----DLRNPIIMHNVTEHFVHSEFRV 313
                D    +      +        +
Sbjct: 71  DVTGVDFWKEMTFEEAKQLAKEHHVEI 97


>gi|261880136|ref|ZP_06006563.1| lysine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270333191|gb|EFA43977.1| lysine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 320

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 9/119 (7%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++L+ NG E+A+     +      Q F +     +  ++          RA Q
Sbjct: 147 KPGLTERFELMVNGKEVANAYSELNDPLDQEQRFIDQMKLADKGDDEAMIIDQDFLRALQ 206

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGL 589
            GMPP  GI  GIDR+VML+ G  N++EV  FP  +    +    P + S+++  ELG+
Sbjct: 207 YGMPPTSGIGIGIDRLVMLMTGQPNIQEVMPFPQLKPEKKM----PQS-SIKEWAELGV 260



 Score = 40.8 bits (94), Expect = 0.63,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 2/92 (2%)

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRIC 278
            FR+E       P EF  +++ + + + + +++  E +L  +    +    V N    I 
Sbjct: 1   NFRNEGMDKFHNP-EFTCMELYVQYKDYNWMMSFTERLLETICVAVNGTTEVKNGEHVIS 59

Query: 279 YDDAIRRYGT-DKPDLRNPIIMHNVTEHFVHS 309
           +    RR    D    +    + + TE  ++ 
Sbjct: 60  FKAPYRRLPILDAIKEKTGFDLSDKTEEEIYK 91


>gi|326432096|gb|EGD77666.1| asparaginyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 608

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 60/178 (33%), Gaps = 8/178 (4%)

Query: 14  VSDVGSFVRLSGWVHRVRP--HGGIIFLDIRDHYGITQVVANP--DSACFEIAKSVRSEW 69
            S +G  + + GWV + R    G + FL++ D      +      D +  E  K  +   
Sbjct: 70  ESFLGQTITVGGWVKKGRAAEKGTLFFLEVNDGSCPGNLQCKRKVDESDEEAIKLYKPLT 129

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
                  V+ R            + EL  +  E++            +   P  +  K+ 
Sbjct: 130 K--TGASVLLRGKIVKAPEGKEQKFELDIE--EVVHSGLIEGSYPIAKARIPLEVLRKHC 185

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            L  R + +      R  +  +         F+   TP++TAS  EGA +    + + 
Sbjct: 186 HLRARTNIISAVARVRNALAQATHRFFSDNGFMYLHTPLITASDCEGAGEMFQVTTLF 243



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    E+  G  R    +V+ +     G+ +   E          + G  PH G   G 
Sbjct: 526 LVPKIGELVGGSQREERLDVLRRRLQEAGLDESDYE----WYLDLRRFGTVPHSGFGLGF 581

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R++ML+ G +N+R+V  +P 
Sbjct: 582 ERLIMLVTGMENIRDVIPYPR 602



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 3/88 (3%)

Query: 190 SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+   A      Q +    A      +   P FR E+  + R   EF+ ++ E++F + 
Sbjct: 327 DFFKRAAYLTVSGQLQGESYACSMGNIYTFGPTFRAENSNTTRHLAEFWMIEPEIAFCDL 386

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNF 274
              ++  E+ +R   +   +      +F
Sbjct: 387 TGCMDCAEDYVRYCCQYVLDNCRADLDF 414


>gi|167629422|ref|YP_001679921.1| lysyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592162|gb|ABZ83910.1| lysyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 230

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             ++++     E+ +     +      + F      +E  +            A + GMP
Sbjct: 134 TDRFEVFITRRELGNAFSELNDPIDQRERFVRQLALREAGDEEAHMMDEDFLNALEYGMP 193

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           P GG+  GIDR+VMLL  + ++R+V LFP  ++  DL
Sbjct: 194 PTGGLGIGIDRLVMLLTDSPSIRDVILFPTMRHRDDL 230



 Score = 41.2 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT-DKPDLR 294
            +++  ++ + +D++   EN++  V ++      ++     I       R    D     
Sbjct: 1   MIEIYQAYADFNDMMELTENLVASVAQKVLGTTQITYQGEEIDLTPPWPRLNMLDAIRQY 60

Query: 295 NPIIMHNVTEHFVHSE 310
             +  H++T+     E
Sbjct: 61  AGVDFHSITDDAAARE 76


>gi|194760041|ref|XP_001962250.1| GF14536 [Drosophila ananassae]
 gi|190615947|gb|EDV31471.1| GF14536 [Drosophila ananassae]
          Length = 427

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 16/132 (12%)

Query: 1   MHRY--RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSAC 58
           ++R+  RTH CG+L  ++V   V + GW+   R +    F  ++D YG TQV+  P +  
Sbjct: 306 INRFAGRTHHCGELSFNEVNQNVVICGWLAFQRMNK---FFILKDAYGKTQVIVMPKTKG 362

Query: 59  FEIA--KSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
            E      V  + +L ++G V  R   T+N  ++TG IE+ A ++ +L            
Sbjct: 363 LEDYVGNDVPVDTLLLVEGTVFGRPPSTLNPKMLTGDIEVKADRVTVL---------QLD 413

Query: 117 EREYPESIRFKY 128
             E P+ ++ K+
Sbjct: 414 NNELPKELQIKH 425



 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 4/113 (3%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R  +CGDL   DVG+ V L GW+  ++ +    FL ++D +G TQ+  + D +   +  S
Sbjct: 169 RDLTCGDLRRDDVGTTVTLVGWIPFIKSNK---FLQLKDGHGQTQLTVD-DVSIMSVFTS 224

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            + + V  I G V+SR    +N   +TG+IE+     ++++  E    P+   
Sbjct: 225 AQMQSVFQIVGKVVSRPPVNVNLKYVTGEIEVCVTSAKVINPYEPYEGPIKSN 277



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 8   SCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRS 67
           +CGDL     G FV L+G + +        F ++RD  G +  +   +     IA+ +R+
Sbjct: 30  NCGDLRSEHNGQFVELTGKLTKKSVTR---FAELRDRSGGSCQLVILEDKYPRIARRIRN 86

Query: 68  E---WVLCIDGLVMSRSAETINANIITGQIELSAQKI 101
                 L I G VM R   + N  + TG IE+  Q+I
Sbjct: 87  MPSNVNLTIMGQVMLRPQNSRNPTMSTGDIEVEVQEI 123


>gi|189424973|ref|YP_001952150.1| tRNA synthetase class II (D K and N) [Geobacter lovleyi SZ]
 gi|189421232|gb|ACD95630.1| tRNA synthetase class II (D K and N) [Geobacter lovleyi SZ]
          Length = 302

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 7/153 (4%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202
            R +++ ++R       F+E  TP  + A++PE   +F+ P        + L  +P+   
Sbjct: 9   IRAQVLQTIRRFFTERGFLEVETPFRIPANAPE---EFIDPVPALAS--WQLQTSPEICM 63

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + L+  G+D+ FQI  C+R ++  S R   EF  L+   S  +  D++     +LR V +
Sbjct: 64  KRLLCRGYDKIFQICRCWRADERGS-RHLTEFTMLEWYRSNADYRDLMQDCVGLLRQVAD 122

Query: 263 EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
             S G     N L+I  +     +   +  LR 
Sbjct: 123 TCSEGACFKRNDLKIDPNQTWLHFSVQEAFLRF 155



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC---GMPP 535
           A +++L   G E+A+G             F      ++ +      L   F      MPP
Sbjct: 211 AERFELYVGGLELANGFSELTDPFEQRARFEEANRIRQQMGKSELPLPEPFLAELSAMPP 270

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLF 562
             GIA G+DR+VML +GA  + +V  F
Sbjct: 271 AAGIALGVDRLVMLTVGADCIDQVVAF 297


>gi|302799643|ref|XP_002981580.1| hypothetical protein SELMODRAFT_114752 [Selaginella moellendorffii]
 gi|300150746|gb|EFJ17395.1| hypothetical protein SELMODRAFT_114752 [Selaginella moellendorffii]
          Length = 294

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 4/100 (4%)

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR----FG 523
            ++ + L      +++L   G E+A+           ++A  +    +   ++       
Sbjct: 189 PVEVSPLAKAHRRRFELYICGRELANAFSELTDPIEQVRALVSACHPQHKNDSYEVTLDE 248

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               A + GMPP  G+  GIDR+VMLL  + ++R+V  FP
Sbjct: 249 DFLTALEYGMPPTAGMGIGIDRLVMLLTDSPSIRDVIAFP 288



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR  +      +     L  A + + + +     +R  ++   FR+E   +   P E
Sbjct: 7   GADARPSITHHNSVERDL-VLRIATELHLKWVPV---ERVDELGRIFRNEGISTRHNP-E 61

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
           F  +++  ++ + +D++   E+++    E     
Sbjct: 62  FTSIEIYQAYADYNDMMALAEDLIAKCAEAILGN 95


>gi|69250885|ref|ZP_00605183.1| tRNA synthetase, class II (D, K and N) [Enterococcus faecium DO]
 gi|68193905|gb|EAN08485.1| tRNA synthetase, class II (D, K and N) [Enterococcus faecium DO]
          Length = 204

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 55/134 (41%), Gaps = 13/134 (9%)

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           AR F+          Y L  A + + + L+  G ++ ++I   FR+E   +   P EF  
Sbjct: 1   ARPFITHHNALDIDLY-LRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNP-EFTM 58

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYG 287
           L+   ++ + +D++N  E ++R   E+      ++          +F RI   DAI+   
Sbjct: 59  LEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAVDLESDFKRIHMVDAIKE-- 116

Query: 288 TDKPDLRNPIIMHN 301
               D    + +  
Sbjct: 117 QTGVDFWQEMTLEE 130


>gi|207344772|gb|EDZ71801.1| YHR019Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 297

 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 66/185 (35%), Gaps = 23/185 (12%)

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
           + S+R     E+  E + P +  +  EG       +   + ++  L Q+ Q Y +  +AS
Sbjct: 1   LKSVRRVYDEEHLTEVTPPCMVQTQVEGGSTLFKMNYYGEEAY--LTQSSQLYLETCLAS 58

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS--- 265
                + I   FR E   + R   E+  ++ E++F+  DD+L  +E ++    +      
Sbjct: 59  -LGDVYTIQESFRAEKSHTRRHLSEYTHIEAELAFLTFDDLLQHIETLIVKSVQYVLEDP 117

Query: 266 -----------NGNTVSNNFLRICYDDAIRRYGTDKP------DLRNPIIMHNVTEHFVH 308
                      N       F+R+ Y DAI              D +    +    E  + 
Sbjct: 118 IAGPLVKQLNPNFKAPKAPFMRLQYKDAITWLNEHDIKNEEGEDFKFGDDIAEAAERKMT 177

Query: 309 SEFRV 313
               V
Sbjct: 178 DTIGV 182



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 42/121 (34%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +       F M +   +      +         L+ N  EI  G +R    + ++  F  
Sbjct: 188 RFPVEIKSFYMKRCSDDPRVTESVDV-------LMPNVGEITGGSMRIDDMDELMAGFKR 240

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI      + +       + G  PHGG   G +RI+  L     VR+ SL+P     C 
Sbjct: 241 EGIDT----DAYYWFIDQRKYGTCPHGGYGIGTERILAWLCDRFTVRDCSLYPRFSGRCK 296

Query: 571 L 571
            
Sbjct: 297 P 297


>gi|47195986|emb|CAF87751.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 164

 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 3/136 (2%)

Query: 90  ITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRII 149
             G  EL     E++ +A           +    ++   R + +R + + K +  R+ + 
Sbjct: 2   APGGHELHCDFWELIGLAPAGGADNLLNEDSDVDVQLNNRHMLIRGENVSKILRVRSTVT 61

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
              R    +  + E + P L  +  EG       +   + ++  L Q+ Q Y +  +   
Sbjct: 62  QCFRDHFFSRGYYEIAPPTLVQTQVEGGSTLFSLNYFGEQAY--LTQSSQLYLETCIP-A 118

Query: 210 FDRYFQIAPCFRDEDP 225
               F IA  +R E  
Sbjct: 119 LGDTFCIAQSYRAEQA 134


>gi|301111548|ref|XP_002904853.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262095183|gb|EEY53235.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 215

 Score = 91.7 bits (226), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 69/186 (37%), Gaps = 38/186 (20%)

Query: 94  IELSAQKIEILSVAEELPLPVFGER---------------EYPESIRFKYRFLDLRRDTL 138
           + LS     +LS A++       +R                     R   R LDL     
Sbjct: 18  VTLSVPDSPVLSTAQKNVELNVEKRCPPRRLRQGNGSSYVNVGLEDRLNSRPLDLHTPAN 77

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
                 +  +    R  +I  +F+E  TP L                        L Q+P
Sbjct: 78  QCIKRIQAAVGQLFRAFLIQRDFVETHTPKLDVI---------------------LAQSP 116

Query: 199 QQYKQL-LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENV 256
           Q+YKQ+   A+G +R F+I P F  E+  + R   EF  LD+EM+  E   ++L    ++
Sbjct: 117 QKYKQMACAAAGLERVFEIGPVFCAENSSTHRHMCEFVGLDLEMTIKEHYHEVLEVFSDL 176

Query: 257 LRGVFE 262
              +F+
Sbjct: 177 YIYIFD 182


>gi|194376016|dbj|BAG57352.1| unnamed protein product [Homo sapiens]
          Length = 254

 Score = 91.3 bits (225), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 62/166 (37%), Gaps = 10/166 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V   +         + +E  + + G+
Sbjct: 92  GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGM 151

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRD 136
           +              G  ELS    E++ +A           E    ++   R + +R +
Sbjct: 152 LNLTPKG----KQAPGGHELSCGFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGE 207

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
            + K +  R+ +    R       + E S       S   A++   
Sbjct: 208 NMSKILKARSMVTRCFRDHFFDRGYYEVSMH-----SSAFAKNMFF 248


>gi|156094462|ref|XP_001613268.1| asparagine-t RNA ligase [Plasmodium vivax SaI-1]
 gi|148802142|gb|EDL43541.1| asparagine-t RNA ligase, putative [Plasmodium vivax]
          Length = 668

 Score = 91.3 bits (225), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 56/434 (12%), Positives = 118/434 (27%), Gaps = 109/434 (25%)

Query: 5   RTHSCGDLGVS---DVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACF 59
           RT     L        G    + GWV  VR  G     F+D+ D   +  +    D+   
Sbjct: 108 RTKIKDILRAQGTHSEGETCTICGWVKSVRTVGKNRFSFIDVNDGSHVKNLQVVVDAGIP 167

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIEL------SAQKIEILSVAEEL--- 110
              +  R      +    +  S E   +     ++EL       A  + +L   E     
Sbjct: 168 NYGEVSR-----VLTDDAVECSGELKCSLGKKQRVELCVRDAARAHYVRLLGRGEGARSG 222

Query: 111 --------------------------------------------PLPVFGEREYPESIRF 126
                                                             ++ + +    
Sbjct: 223 GGSGGGSEGGSADGEGEKRDDGEGDRRDDGEGDRRDDGEGDRRGKHYAIAKKYHSKEHLR 282

Query: 127 KYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            +  L  R          ++ ++          N    +TP+LT++  EGA +    + +
Sbjct: 283 SFPHLRARTKLYSCVFRLKSDVVAETFKFWRERNCTYINTPVLTSNDCEGAGELFHATTL 342

Query: 187 NQG----------------------------------------SFYALP---QAPQQYKQ 203
                                                       F+  P       Q   
Sbjct: 343 MSRRGSGGGGEANGSDGSGGASGIDQRDERPGEPVKGDPPFCRDFFKKPCYLNVSSQLAL 402

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
             +       F +   FR E   + R   EF  +++E++F     I++  E  ++ + + 
Sbjct: 403 ECLCCSMGDVFTLNQSFRAEQSNTVRHLSEFLMMEVELAFSNLTSIISLAEEYIKTMVK- 461

Query: 264 FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
           F+   +   +++   +D  ++     +  L+ P  +    E     +  V    ++V+P 
Sbjct: 462 FALHQSEDVDYIHEHHDRTLKE--KLQAVLQKPFAVVTYDEAMQIVKRHVGRVGVAVDPH 519

Query: 324 YEVWAIPAKGGGGN 337
                  ++ GG  
Sbjct: 520 VAARTDVSQRGGAP 533



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 12/115 (10%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                 PF M                 A    L+ +  E+  G  R      + +     
Sbjct: 561 YPQEIKPFYMALNAD--------GKTVACMDVLLPHVGEVVGGSEREIRIHTLERRMKEK 612

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +   + E       +  + G  PH G   G+DR++M L    N+R+V  FP + 
Sbjct: 613 RLDLRLYEP----YLQLRRQGNVPHAGFGLGVDRLIMFLTSMSNIRDVVPFPRAP 663


>gi|323176020|gb|EFZ61612.1| lysyl-tRNA synthetase domain protein [Escherichia coli 1180]
          Length = 228

 Score = 90.9 bits (224), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 46  PFEKLTMREAIKKYRPETDMADLDNF-----DAAKALAESIGITVEKSWGLGRIVTEIFD 100

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 101 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 148

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   + F     +K   ++           A + G+PP  G+  GIDR++ML
Sbjct: 149 GFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIML 208

Query: 550 LLGAKNVREVSLFPMSQ 566
              +  +R+V LFP  +
Sbjct: 209 FTNSHTIRDVILFPAMR 225


>gi|307104224|gb|EFN52479.1| hypothetical protein CHLNCDRAFT_138835 [Chlorella variabilis]
          Length = 624

 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 66/195 (33%), Gaps = 12/195 (6%)

Query: 8   SCGDLGVSDVGSFV-----RLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEI 61
                G  + G  V      L+G V R    G  +IF D+R      QV+ +  +    +
Sbjct: 118 YVAQYGSLEPGQQVPEEGVSLAGRVVRKAASGAKLIFFDLRSEGAKIQVMCDARNFGGAL 177

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYP 121
               R    +    +V              G++ +  + +++L+       P        
Sbjct: 178 EDFQRLMNSVKRGDIV---GVGGFPGKSKRGELSVFPRSLQVLAPCL-HMPPGGHFGLKD 233

Query: 122 ESIRFKYRFLDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARD 179
           +  R++ R+LDL     +      R+RII  +R  +    F+E     +    +PE    
Sbjct: 234 QETRYRQRYLDLIVNPEVQDIFRTRSRIIGGVRRFLDERGFLEFRNEGIDLTHNPEFTTC 293

Query: 180 FLVPSRVNQGSFYAL 194
               +  +     A+
Sbjct: 294 EFYQAYADYNDLIAM 308



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 16/135 (11%)

Query: 447 EEEKKIDF-AHNPF---TMPQGGMESLKGNDLLSIKAFQYDLVC------NGFEIASGGI 496
            E K ID     PF   +M  G  E+L       + + +  LV       +G E +    
Sbjct: 333 PEGKAIDIDFTPPFRRISMCAGLEEALDVKLPADMDSEEARLVLVELCKKHGVECSPPHT 392

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
              + + + +A  +                 A + G+PP GG   GIDR  M+L    N+
Sbjct: 393 TARLLDKLAKAQGDDQAMFVD-----ENFCTALEYGLPPTGGWGLGIDRFTMMLTDKNNI 447

Query: 557 REVSLFP-MSQNFCD 570
           +EV LFP M  +  D
Sbjct: 448 KEVLLFPAMKPDASD 462



 Score = 41.6 bits (96), Expect = 0.43,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 220 FRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           FR+E       P EF   +   ++ + +D++   E ++ G+         +  +
Sbjct: 277 FRNEGIDLTHNP-EFTTCEFYQAYADYNDLIAMTEELISGLVLAIKGTYKIQYH 329


>gi|167948503|ref|ZP_02535577.1| Lysyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 274

 Score = 90.9 bits (224), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/161 (25%), Positives = 66/161 (40%), Gaps = 9/161 (5%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL- 469
                AR  IA+ L I     +    +     +E   E + +D      T     +  L 
Sbjct: 115 DDLDRAR-AIAERLEIPLKASYGLGKV-QIEIFEKTVEHQLMDPTF--ITAYPTEVSPLA 170

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           + ND       +++    G EIA+G    + +E   + F      K+  ++         
Sbjct: 171 RRNDDDPFVTDRFEFFVGGREIANGFSELNDAEDQAERFRKQVEEKDAGDDEAMHFDEDY 230

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            RA + GMPP  G   GIDR+VMLL  + ++R+V LFP  +
Sbjct: 231 VRALEHGMPPTAGEGIGIDRLVMLLTDSPSIRDVLLFPHMR 271



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 10/109 (9%)

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  AP+ Y + L+  GF+R ++I   FR+E   +   P EF  L+   ++ +   +
Sbjct: 1   MELFLRIAPELYLKRLVVGGFERVYEINRNFRNEGLSTRHNP-EFTMLEFYEAYTDYHGL 59

Query: 250 LNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRYGTD 289
           ++  E++LR + EE                 + F R+   D+I  +  D
Sbjct: 60  MDLTEDMLRHLCEEVLGSTSVTYQGESYDFDSPFRRMTVKDSILHFNDD 108


>gi|270645372|ref|ZP_06222181.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270317246|gb|EFA28823.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 183

 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 6/115 (5%)

Query: 459 FTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F M      S     ND       +++L   G EI +G    + +E   + F     +KE
Sbjct: 68  FLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKE 127

Query: 517 VVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             ++           A + G+PP  G   GIDR+ ML   A ++R+V LFP  + 
Sbjct: 128 AGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFPAMRQ 182


>gi|156086936|ref|XP_001610875.1| asparaginyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154798128|gb|EDO07307.1| asparaginyl-tRNA synthetase, putative [Babesia bovis]
          Length = 557

 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 46/288 (15%), Positives = 96/288 (33%), Gaps = 33/288 (11%)

Query: 8   SCGDLGVSDVG-SFVRLSGWVHRVRPH--GGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           +  D   ++ G    +L GWV +   +      ++++ D    + V     S+       
Sbjct: 71  TASDNTTTNGGRQLYKLVGWVRKTTENAEKTGTYIEVVDGTSPSHVSVVVWSSHPN-YGM 129

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE-- 122
           +R+  V     ++     + +  N+    + L     E    +  L       R+     
Sbjct: 130 LRNVNVGDAITVIGMAEKKLLKTNLSATSLRLVVDGRE-EGHSVSLHPSFKDMRDLDPVG 188

Query: 123 -----SIRFKYRFLDLRRDT--LHKNIVKRTRIINSMRCRM------------IAENFIE 163
                 + +    ++ R     +      R+ +   +   M               +FI 
Sbjct: 189 LNGIYPMTYLREHVNFRSRNAVMQAIFRIRSAVTEGLYHIMKVCHVTGSLYSLQKRSFIN 248

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDE 223
            +TP+LT  + EG  D     R              Q +   + SGF R +++ P FR +
Sbjct: 249 VTTPLLTTVNCEGMGDIFEIDRTF-------LSVSGQLELEALCSGFSRVWKLGPAFRAD 301

Query: 224 DPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
              + R   EF+ L+ EM   +  D++N +  ++ G      +     
Sbjct: 302 RSDTPRHLCEFWMLEAEMVGPDLKDLINVIHQIIIGSARTILDNCRDD 349



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D+   G  EIA G IR      + ++    G+  +     + G     + G  PHGG   
Sbjct: 471 DIFAEGVGEIAGGSIREVNYPELEKSMQEHGVYGKD----YAGYLELRKFGNVPHGGFGI 526

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R++M LLG +N+++V  FP  + 
Sbjct: 527 GFERMIMFLLGIQNIKDVIHFPKVRR 552


>gi|20146174|dbj|BAB88974.1| lysyl-tRNA synthetase [Bacillus cereus]
          Length = 183

 Score = 90.5 bits (223), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 55/140 (39%), Gaps = 13/140 (9%)

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    Y +  A + + + L+  G ++ ++I   FR+E   +   P EF  +++  +
Sbjct: 3   HHNALDMELY-MRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNP-EFTMIELYEA 60

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGN---------TVSNNFLRICYDDAIRRYGTDKPDL 293
           + +  DI+   E+++  + ++               +   + R+   DAI++Y     D 
Sbjct: 61  YADYKDIMKLTEDMVAHIAKKVLGTTTIQYGDYEINLEPEWTRLHMVDAIKQY--SGADF 118

Query: 294 RNPIIMHNVTEHFVHSEFRV 313
            NP+ +    E        +
Sbjct: 119 WNPMSIEEARELAKEHNVEI 138


>gi|302340139|ref|YP_003805345.1| tRNA synthetase class II (D K and N) [Spirochaeta smaragdinae DSM
           11293]
 gi|301637324|gb|ADK82751.1| tRNA synthetase class II (D K and N) [Spirochaeta smaragdinae DSM
           11293]
          Length = 324

 Score = 90.1 bits (222), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 9/168 (5%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFL----VPSRVNQGSFY 192
             + I+ R+R+  ++R    ++ F+E  TP L+ +  PE   +         R  +   Y
Sbjct: 2   QREMILFRSRLNRAVRNFFESKGFLEVETPQLSPTVIPEAHIELFSTRFFSDRFGERELY 61

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            LP +P+ + + L+A G    FQI   FR+++  S     EF  L+        ++ + T
Sbjct: 62  LLP-SPEIHMKQLIAEGSGSIFQICKSFRNDEQMSHYHNPEFSMLEWYAVQGSSEENIAT 120

Query: 253 MENVLRGVFEEFS-NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
            E +   + E    +G  +S  F R+   +A  R+     DL   + +
Sbjct: 121 TEELFSCLAETLHRDGEYLSPPFRRMTMAEAFDRFA--GIDLEKGLSL 166



 Score = 50.1 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 11/109 (10%)

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV-------MLQAFSNVGIS 514
               +E L      +    +++L   G E+A+        +                   
Sbjct: 214 YPAAVEVLAERIPGTGWLDRWELYVKGTELANCYAEERSQKQVESFFHSQSAQKVQSSRV 273

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              ++  +  ++R F    P   G+A G+DR+ ML  GA  +  V LFP
Sbjct: 274 VPDIDPEYPQIFRNF----PKCSGVALGMDRLAMLFSGAATIEGVMLFP 318


>gi|71031344|ref|XP_765314.1| asparaginyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68352270|gb|EAN33031.1| asparaginyl-tRNA synthetase, putative [Theileria parva]
          Length = 710

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 74/199 (37%), Gaps = 30/199 (15%)

Query: 21  VRLSGWVHRVRPH--GGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VR+ GW   +R    G ++F+ + D       Q+V + DS  ++ A   +S   +  +G 
Sbjct: 143 VRVFGWCKSMRSQDGGRLLFVIVNDGSCKSNLQIVVHNDSKGYKEALKCKSGTSIQANGF 202

Query: 77  VMSRSAETINANIITGQ---------------------IELSAQK-----IEILSVAEEL 110
           +++R  +      +T +                      EL         I++L V    
Sbjct: 203 LVNRETQPKPPTEVTKENNPELPEEVKDYELLDEISNRYELHITSDDSNYIQVLGVTNSP 262

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                 +++       +   L  R   +   +  R+ +  ++     ++NF   ++P++T
Sbjct: 263 GTYPIAKKDLTMEFLRENAHLRPRTYLISAVMRVRSSLSIAIHLFFQSKNFHYLNSPVIT 322

Query: 171 ASSPEGARDFLVPSRVNQG 189
            +  EGA +    + + + 
Sbjct: 323 TADCEGAGELFQVTTLFEN 341



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 40/97 (41%), Gaps = 6/97 (6%)

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           ++ ND     A   DL+     E+  G  R    + + ++     ++ +           
Sbjct: 612 MRRNDDGKTVA-AMDLIIPKIGELIGGSQREERFDYLEKSIKENKLNMQDYW----WYMD 666

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             + G   H G   G +R++M++ G +N+++V  FP 
Sbjct: 667 LRRYGTIVHSGFGLGFERLIMMVTGVQNIKDVIPFPR 703



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 31/91 (34%)

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           +      Q             +   P FR E+  ++R   EF+ ++ EM+ V+   ++  
Sbjct: 444 SYLTCSGQLSAENYCCSMGSVYTFGPTFRAENSHTNRHLSEFWMIEPEMTLVDLPGLMEI 503

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
            E  ++ +       N     F     D  +
Sbjct: 504 TEEFIKFLVNYILKHNYDDLVFFNNTVDKEL 534


>gi|307718950|ref|YP_003874482.1| lysyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306532675|gb|ADN02209.1| lysyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 350

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 5/151 (3%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGA-RDFLVPSRVNQGSF--YALP 195
                R R+++ +R    A + +E  TP L     PE   R F        G+    +L 
Sbjct: 31  HIARIRARLLSELRAFFRAHDHLEVDTPHLAPYLIPEAHIRPFTTTHHPLHGTPRTLSLL 90

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A G+   FQI+  FRD +P S R   EF  L+   +    DD ++  E 
Sbjct: 91  PSPELWMKHLLAQGYGDIFQISHVFRDAEPPSPRHSPEFTMLEWYTTDSTADDQISLTEE 150

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +   +     +   +S  F R+  ++A  RY
Sbjct: 151 LFATLAHSL-DAPHLSPPFHRLTMEEAFTRY 180



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 1/109 (0%)

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
           T     + +L      +    +++L   G E+A+        + +          +    
Sbjct: 236 THYPTLVPTLARPIPDTPWRERWELYAGGMELANCYTEETDPDRVEHFMEGELTRRGTPT 295

Query: 520 NRFGGLYRAFQCGMP-PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                 + A    +P P  G+A G+DR++M + G K++R V  FP+S N
Sbjct: 296 PPPPPDFPATCTRIPHPTSGVALGVDRLLMYITGEKDIRGVIFFPLSDN 344


>gi|256752945|ref|ZP_05493774.1| nucleic acid binding OB-fold tRNA/helicase-type
          [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748178|gb|EEU61253.1| nucleic acid binding OB-fold tRNA/helicase-type
          [Thermoanaerobacter ethanolicus CCSD1]
          Length = 89

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/78 (51%), Positives = 53/78 (67%), Gaps = 2/78 (2%)

Query: 4  YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SACFEI 61
           RTH CG+L V DV  +V + GWV R R HGG++F+D+RD  GI QVV + +  S  FE 
Sbjct: 9  KRTHMCGELTVEDVDKYVVVMGWVQRRRDHGGLVFIDLRDRTGIVQVVFSNEVSSEAFEK 68

Query: 62 AKSVRSEWVLCIDGLVMS 79
           +SVRSE+VL I+G V+ 
Sbjct: 69 VQSVRSEYVLAIEGKVVK 86


>gi|10798642|emb|CAC12821.1| lysyl-tRNA synthetase [Nicotiana tabacum]
          Length = 169

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 8/116 (6%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++L  N  E+ +     +   V  Q F++    ++  ++           A +
Sbjct: 27  KPGLTERFELFINKHELCNAYTELNDPVVQRQRFADQLKDRQSGDDEAMALDENFCTALE 86

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            G+PP GG   GIDR+ MLL  ++N++EV LFP            PS  S ++ +E
Sbjct: 87  YGLPPTGGWGLGIDRLAMLLTDSQNIKEVLLFP----AMKPQDEPPSKESNKKPQE 138


>gi|119629073|gb|EAX08668.1| hCG1644029 [Homo sapiens]
          Length = 262

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 8/156 (5%)

Query: 22  RLSGWVHRVRPH-GGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSR 80
           +++G +H  R   G  IF D++      QV+ NP +   E              G ++  
Sbjct: 99  KVAGRIHAKRASEGKFIFYDLQGEGVKLQVMVNPRNYKSE---EFIHISKKLHQGDIIGV 155

Query: 81  SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK 140
                      G++ +   +I +LS      LP        +  R+  ++LDL  +   +
Sbjct: 156 QGNP--GKTKKGELSIIPYEITLLSP-HMHMLPHLHCGLKDQETRYHQKYLDLILNDFVR 212

Query: 141 N-IVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
              +  ++II  +R  +    F++  TP++     E
Sbjct: 213 QKFIICSKIITCIRSFLDELGFLKIETPMVNIIPGE 248


>gi|311087468|gb|ADP67548.1| lysyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon
           pisum)]
          Length = 350

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 8/122 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           EK +   H P    Q  + ++   D     + ++++   G E+ +G           + F
Sbjct: 232 EKPLFVYHFP--AEQASLAAINSKDPR--ISERFEIFFKGIELGNGFYELIDVNEQKKRF 287

Query: 509 SNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +  +             A   G+PP  G+A G+DR++ML+L  K++ EV  FP+
Sbjct: 288 IRDNKERRSMNLPIRKIDNFFLSALSYGLPPCSGVAIGLDRLIMLILNKKSIHEVIAFPV 347

Query: 565 SQ 566
            +
Sbjct: 348 DR 349



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 59/126 (46%), Gaps = 8/126 (6%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYALPQ 196
           +KR+ II+++R     +N +E  TPIL+ S+           +++    +++   + L  
Sbjct: 42  IKRSNIISNIRLFFSKKNILEVETPILSRSTVTDVHLTSFETNYISSDNIDELKLW-LTT 100

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+ + + L+AS     +QI   FR+++      P EF  L+    F      +  ++  
Sbjct: 101 SPEYHMKRLLASESGSIYQICHSFRNKELGRYHNP-EFTMLEWYQPFCSMKKFIKEIDIF 159

Query: 257 LRGVFE 262
           L+ + +
Sbjct: 160 LQIILK 165


>gi|255018989|ref|ZP_05291115.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 81

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 3/82 (3%)

Query: 1  MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD--SAC 58
          M + RT  CG+L  + +G  V L GWV + R  GG+IF+D+RD  GI QVV NP+     
Sbjct: 1  MEK-RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDREGIVQVVFNPEFSKEA 59

Query: 59 FEIAKSVRSEWVLCIDGLVMSR 80
           EIA SVR+E+V+ I G V +R
Sbjct: 60 LEIADSVRNEFVVTIKGTVHAR 81


>gi|289803678|ref|ZP_06534307.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 128

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +         P       + ND+      +++    G EI +G    + +E   Q F
Sbjct: 4   EAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRF 63

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +   +K   ++           A + G+PP  G+  GIDR+VML   +  +R+V LFP 
Sbjct: 64  LDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPA 123

Query: 565 SQ 566
            +
Sbjct: 124 MR 125


>gi|46202036|ref|ZP_00053901.2| COG2269: Truncated, possibly inactive, lysyl-tRNA synthetase (class
           II) [Magnetospirillum magnetotacticum MS-1]
          Length = 338

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 14/164 (8%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-----EGARDFLVPSRVNQGSFYA 193
             N+  R+R +N+ R    A  F E  TP L  S       +     L            
Sbjct: 6   RANLDLRSRAVNATRAFFAARGFAEVETPCLQVSPGLEPHLKAFATALTDPYGGPDRPLY 65

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+   + L+ +G  R +Q+A  FR+ +  +   P EF  L+   +    DD+++  
Sbjct: 66  LHTSPEFAMKKLLVAGMPRLYQLAKVFRNAERSATHHP-EFTMLEWYRAGASLDDLMDDT 124

Query: 254 ENVLRG--------VFEEFSNGNTVSNNFLRICYDDAIRRYGTD 289
           E +++         +             + R+   +A   Y   
Sbjct: 125 EALVQECARAAGTKLLRREDKDCDPFVPWRRLSVAEAFGEYAHM 168



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-VGISKEVVENRF---GGL 525
           + +      A +++    G E+ +       +    + F+  + + + +   R+      
Sbjct: 238 RPSPADPRVAERFEAYALGVELCNAFGELTDAAEQRRRFTADMDLKERLYGERYPLDEDF 297

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A   GMP   GIA G DR+VMLL GA+++ E+   P++Q
Sbjct: 298 LAALDLGMPDSAGIALGFDRLVMLLAGAQSIDEILWAPVAQ 338


>gi|148287356|emb|CAJ32470.1| Lysyl-tRNA synthetase [Morganella morganii]
          Length = 119

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 4/102 (3%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR---- 527
           ND       +++    G EI +G    + +E   + F+     K+  ++           
Sbjct: 18  NDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAERFAEQVRQKDAGDDEAMFYDEDYVV 77

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           A + G+PP  G+  GIDR+VML   +  +R+V LFP  +   
Sbjct: 78  ALEHGLPPTAGLGIGIDRMVMLFTDSHTIRDVILFPAMRPGK 119


>gi|218262600|ref|ZP_03476997.1| hypothetical protein PRABACTJOHN_02676 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223276|gb|EEC95926.1| hypothetical protein PRABACTJOHN_02676 [Parabacteroides johnsonii
           DSM 18315]
          Length = 208

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E            P       K +        +++L+ NG E+A+     +      + F
Sbjct: 10  EGTFIQPTFIIDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERF 69

Query: 509 SNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                  E  ++          RA Q GMPP  GI  GIDR+VML+ G   ++EV LFP 
Sbjct: 70  KEQLRLSEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLVMLMTGQTTIQEVLLFPQ 129

Query: 565 SQ 566
            +
Sbjct: 130 MR 131


>gi|257471632|ref|ZP_05635631.1| lysyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon
           pisum)]
          Length = 350

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 8/122 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           EK +   H P    Q  + ++   D     + ++++   G E+ +G           + F
Sbjct: 232 EKPLFVYHFP--AEQASLAAINLKDPR--ISERFEIFFKGIELGNGFYELIDVNEQKKRF 287

Query: 509 SNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +  +             A   G+PP  G+A G+DR++ML+L  K++ EV  FP+
Sbjct: 288 IRDNKERRSMNLPIRKIDNFFLSALSYGLPPCSGVAIGLDRLIMLILNKKSIHEVIAFPV 347

Query: 565 SQ 566
            +
Sbjct: 348 DR 349



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 59/126 (46%), Gaps = 8/126 (6%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYALPQ 196
           +KR+ II+++R     +N +E  TPIL+ S+           +++    +++   + L  
Sbjct: 42  IKRSNIISNIRLFFSKKNILEVETPILSRSTVTDVHLTSFETNYISSDNIDELKLW-LTT 100

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+ + + L+AS     +QI   FR+++      P EF  L+    F      +  ++  
Sbjct: 101 SPEYHMKRLLASESGSIYQICHSFRNKELGRYHNP-EFTMLEWYQPFCSMKKFIKEIDIF 159

Query: 257 LRGVFE 262
           L+ + +
Sbjct: 160 LQIILK 165


>gi|213422536|ref|ZP_03355602.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 133

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +         P       + ND+      +++    G EI +G    + +E   Q F
Sbjct: 9   EAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRF 68

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +   +K   ++           A + G+PP  G+  GIDR+VML   +  +R+V LFP 
Sbjct: 69  LDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPA 128

Query: 565 SQ 566
            +
Sbjct: 129 MR 130


>gi|262190219|ref|ZP_06048494.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae CT 5369-93]
 gi|262033888|gb|EEY52353.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae CT 5369-93]
          Length = 155

 Score = 89.0 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E K+         P       + +D       +++    G E+A+G    + +E     F
Sbjct: 31  EPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARF 90

Query: 509 SNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +KE  ++           A + G+PP  G   GIDR+VMLL     +R+V LFP 
Sbjct: 91  KAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFPA 150

Query: 565 SQ 566
            +
Sbjct: 151 MR 152


>gi|213400769|gb|ACJ47033.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Onchocerca
           volvulus]
          Length = 121

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 6/121 (4%)

Query: 282 AIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFC 341
           A+ +YG+DKPDLRNP+ + +VTE F  S+F +F   +             K    +R+F 
Sbjct: 3   AMLKYGSDKPDLRNPLSISDVTEVFRDSKFNIFKSNIE-KGMVVRAIPAPKTAKESRSFF 61

Query: 342 DRMNEWA-RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCF 400
           D+  E   +  G  GL YI +  D+ G +   GP+AK  +      IR   +++ GDS F
Sbjct: 62  DKKIEHVQKEFGAKGLGYITF--DKDGTIK--GPIAKFFDKNKINHIREITNVKPGDSIF 117

Query: 401 F 401
           F
Sbjct: 118 F 118


>gi|85858716|ref|YP_460918.1| truncated lysyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85721807|gb|ABC76750.1| truncated lysyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 332

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 86/237 (36%), Gaps = 14/237 (5%)

Query: 107 AEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECST 166
            +     +  ++   E  R+   +   R     + +  R  I++S+R      +++E  T
Sbjct: 7   CKPSLTDLSPKKLTGEDSRYDEGW---RLAGKRETLRLRAEILHSIRRFFRERDYLEVDT 63

Query: 167 PILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           PIL  + +PE               F  L  +P+   + L+A+G+ R FQI  CFR+ + 
Sbjct: 64  PILIPAPAPES------HIDAVACGFQYLQTSPELCMKRLLAAGYPRLFQICSCFREAER 117

Query: 226 RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
            + R   EF  L+      +   ++   E +LR +         ++    RI       R
Sbjct: 118 GT-RHLPEFTLLEWYAQGKDYMFLMEECEALLRFLAVTLYGKEEITFQGSRIDLSAPWER 176

Query: 286 YGTDKPDLRNPIIMHNVT---EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA 339
              ++  LR   I    T   + F           L +     ++  P +     RA
Sbjct: 177 LSVNEAFLRYGGISARQTLAEDIFDEVLVSRIESRLGIERPTFLYDYPVELAALARA 233



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 7/98 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGL 525
           K ND     A +++L   G E+A+            + F      +  +           
Sbjct: 234 KPNDPS--LAERFELYVAGIELANAFSELIDPVEQSRRFEEAQQERRALGKSPYPWPERF 291

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            RA    MPP  GIA GIDR+VML+     + +V  FP
Sbjct: 292 LRALS-AMPPSTGIALGIDRLVMLMTDRAFIDDVVAFP 328


>gi|15617172|ref|NP_240385.1| lysyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|11135234|sp|P57642|SYK3_BUCAI RecName: Full=Uncharacterized protein YjeA
 gi|25528943|pir||G84997 lysine-tRNA ligase (EC 6.1.1.6) [imported] - Buchnera sp.  (strain
           APS)
 gi|10039237|dbj|BAB13271.1| hypothetical lysyl-tRNA synthetase homolog [Buchnera aphidicola
           str. APS (Acyrthosiphon pisum)]
          Length = 324

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 8/122 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           EK +   H P    Q  + ++   D     + ++++   G E+ +G           + F
Sbjct: 206 EKPLFVYHFP--AEQASLAAINLKDPR--ISERFEIFFKGIELGNGFYELIDVNEQKKRF 261

Query: 509 SNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +  +             A   G+PP  G+A G+DR++ML+L  K++ EV  FP+
Sbjct: 262 IRDNKERRSMNLPTRKIDNFFLSALSYGLPPCSGVAIGLDRLIMLILNKKSIHEVIAFPV 321

Query: 565 SQ 566
            +
Sbjct: 322 DR 323



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 59/126 (46%), Gaps = 8/126 (6%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYALPQ 196
           +KR+ II+++R     +N +E  TPIL+ S+           +++    +++   + L  
Sbjct: 16  IKRSNIISNIRLFFSKKNILEVETPILSRSTVTDVHLTSFETNYISSDNIDELKLW-LTT 74

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+ + + L+AS     +QI   FR+++      P EF  L+    F      +  ++  
Sbjct: 75  SPEYHMKRLLASESGSIYQICHSFRNKEIGRYHNP-EFTMLEWYQPFCSMKKFIKEIDIF 133

Query: 257 LRGVFE 262
           L+ + +
Sbjct: 134 LQIILK 139


>gi|315186436|gb|EFU20196.1| Lysine--tRNA ligase [Spirochaeta thermophila DSM 6578]
          Length = 324

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 5/151 (3%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGA-RDFLVPSRVNQGSFYAL--P 195
                R R+++ +R    A + +E  TP L     PE   R F         +  AL   
Sbjct: 5   HIAHIRARLLSELRAFFRAHDHLEVDTPHLAPYLIPEAHIRPFTTTHHPLHDTPRALSLL 64

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A G+   FQI+  FRD +P S R   EF  L+   +    DD ++  E 
Sbjct: 65  PSPELWMKHLLAQGYGDIFQISHVFRDAEPPSPRHSPEFTMLEWYTTGSTADDQISLTEE 124

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           +   +     +   +S  F R+  ++A  RY
Sbjct: 125 LFATLAHSL-DAPHLSPPFHRLTMEEAFTRY 154



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 1/107 (0%)

Query: 460 TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE 519
           T     + +L      +    +++L   G E+A+          + +        +    
Sbjct: 210 THYPTLVPTLARPIPDTPWRERWELYAGGMELANCYTEETDPVRVERFMEGELTRRGTST 269

Query: 520 NRFGGLYRAFQCGMP-PHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
                 + A    +P P  G+A G+DR++M L G K++R V  FP+S
Sbjct: 270 PPPPPDFPATCARIPHPTSGVALGVDRLLMYLTGEKDIRGVIFFPLS 316


>gi|219681923|ref|YP_002468309.1| lysyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|219682478|ref|YP_002468862.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|254782461|sp|B8D8E5|SYK3_BUCA5 RecName: Full=Uncharacterized protein YjeA
 gi|254782462|sp|B8D8A2|SYK3_BUCAT RecName: Full=Uncharacterized protein YjeA
 gi|219622211|gb|ACL30367.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|219624766|gb|ACL30921.1| lysyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|311086304|gb|ADP66386.1| lysyl-tRNA synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon
           pisum)]
 gi|311087952|gb|ADP68031.1| lysyl-tRNA synthetase [Buchnera aphidicola str. JF98 (Acyrthosiphon
           pisum)]
          Length = 324

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 8/122 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           EK +   H P    Q  + ++   D     + ++++   G E+ +G           + F
Sbjct: 206 EKPLFVYHFP--AEQASLAAINLKDPR--ISERFEIFFKGIELGNGFYELIDVNEQKKRF 261

Query: 509 SNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +  +             A   G+PP  G+A G+DR++ML+L  K++ EV  FP+
Sbjct: 262 IRDNKERRSMNLPIRKIDNFFLSALSYGLPPCSGVAIGLDRLIMLILNKKSIHEVIAFPV 321

Query: 565 SQ 566
            +
Sbjct: 322 DR 323



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 59/126 (46%), Gaps = 8/126 (6%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYALPQ 196
           +KR+ II+++R     +N +E  TPIL+ S+           +++    +++   + L  
Sbjct: 16  IKRSNIISNIRLFFSKKNILEVETPILSRSTVTDVHLTSFETNYISSDNIDELKLW-LTT 74

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+ + + L+AS     +QI   FR+++      P EF  L+    F      +  ++  
Sbjct: 75  SPEYHMKRLLASESGSIYQICHSFRNKELGRYHNP-EFTMLEWYQPFCSMKKFIKEIDIF 133

Query: 257 LRGVFE 262
           L+ + +
Sbjct: 134 LQIILK 139


>gi|57234556|ref|YP_181416.1| universal stress protein [Dehalococcoides ethenogenes 195]
 gi|57225004|gb|AAW40061.1| universal stress protein family [Dehalococcoides ethenogenes 195]
          Length = 296

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 5/89 (5%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA--CFEIA 62
          +THSC  L   ++G+ V L+GWVHR R HGG+IF+D+RD  GI QVV NP+ +  C +I 
Sbjct: 3  KTHSCA-LTQENIGTEVTLAGWVHRRRDHGGVIFIDLRDREGIVQVVFNPEQSAACLDIG 61

Query: 63 KSVRSEWVLCIDGLVMSRSAETINANIIT 91
          K +RSE+VL + G+    S +     ++ 
Sbjct: 62 KELRSEYVLQVKGI--KSSGKMFCGELLP 88


>gi|255024380|ref|ZP_05296366.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 230

 Score = 88.6 bits (218), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E + EEK I          +    + K  +       +++L   G E A+     +  
Sbjct: 100 FFETHVEEKLIQPTFVYGHPVEISPLAKKNKEDERF-TDRFELFIVGREHANAFSELNDP 158

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +   G       A + G+PP GG+  GIDR+VMLL  A ++R
Sbjct: 159 IDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTNAPSIR 218

Query: 558 EVSLFPMSQNF 568
           ++ LFP  ++ 
Sbjct: 219 DILLFPTMKHR 229



 Score = 37.7 bits (86), Expect = 5.7,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 51/151 (33%), Gaps = 17/151 (11%)

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           F  L+   ++ + +D++N +E ++  V ++ +              +     Y  D    
Sbjct: 1   FTMLESYAAYEDYEDVMNLVEGLVSTVCKQVNG-----------TTEITYGEYKVDLTPN 49

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
              I M +  + +V  +F   +         +   +P      +  +   +NE+  +  +
Sbjct: 50  WRRIHMADAVKEYVGVDFWNVTSDEEARELAKKHDVPV---TEHMTYGHILNEFFETHVE 106

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLNIVNT 384
             L    +     G+   + P+AK       
Sbjct: 107 EKLIQPTFVY---GHPVEISPLAKKNKEDER 134


>gi|328480067|gb|EGF49063.1| aspartyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 84

 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 38/77 (49%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D+P +E++E  ++   AH+P TMP      L   D  +  A  YD+V NG+E+  G IR 
Sbjct: 8   DWPLFEYDEGIQRWVPAHHPLTMPNEEDVHLLDTDPHAAHAQSYDIVLNGYELGGGSIRI 67

Query: 499 HMSEVMLQAFSNVGISK 515
           H  ++  +      +  
Sbjct: 68  HNRDIQEKNAQGTWLHP 84


>gi|169622585|ref|XP_001804701.1| hypothetical protein SNOG_14517 [Phaeosphaeria nodorum SN15]
 gi|160704803|gb|EAT78057.2| hypothetical protein SNOG_14517 [Phaeosphaeria nodorum SN15]
          Length = 352

 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 21/129 (16%)

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPS---------------RVNQGSFYALPQ---- 196
           M+ ++F++C  PI+T+S  EGA +    +               + +   F+  P+    
Sbjct: 2   MLRQDFVQCHPPIITSSDCEGAGEVFTVAPYAPSTSTSEPANQAKEHDDHFFGSPKYLTV 61

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD-ILNTMEN 255
           + Q + + L A   ++ + ++P FR E   + R   EFY L+ E++FV+    ++N +E+
Sbjct: 62  SSQLHLEAL-AQSVNKVWTLSPTFRAEKSDTARHLSEFYMLEAELAFVDDLQVVMNVVED 120

Query: 256 VLRGVFEEF 264
           +LR V  E 
Sbjct: 121 LLRAVATEL 129



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 23/146 (15%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL-VCNGFEIA 492
             ++ D+P                PF M        +G    ++    +DL V    E+ 
Sbjct: 220 PVFVTDYP------------RNIKPFYMAPSADLQAEGQTPSTVAC--FDLLVPELCELV 265

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVEN--------RFGGLYRAFQCGMPPHGGIAAGID 544
            G +R H    +L++  + G+  + +                   + G  PHGG   G D
Sbjct: 266 GGSMREHRLPELLKSMQDHGLPTQGMGETESEVARGSLQWYVDLRRYGSVPHGGFGLGFD 325

Query: 545 RIVMLLLGAKNVREVSLFPMSQNFCD 570
           R++  L G  N+R+V  FP     CD
Sbjct: 326 RLLCYLSGVSNIRDVVSFPRWHKRCD 351


>gi|69250886|ref|ZP_00605184.1| tRNA synthetase, class II (D, K and N) [Enterococcus faecium DO]
 gi|68193906|gb|EAN08486.1| tRNA synthetase, class II (D, K and N) [Enterococcus faecium DO]
          Length = 114

 Score = 88.2 bits (217), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 4/101 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGL 525
           K N        +++L   G E A+     +      + F      +E+  +         
Sbjct: 14  KKNPEDPRFTDRFELFIVGREFANAFTELNDPIDQRERFEAQEKERELGNDEAHGVDEDF 73

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A + GMPP GG+  GIDR+VMLL  A+++R+V LFP  +
Sbjct: 74  LEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 114


>gi|311086878|gb|ADP66959.1| lysyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 245

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 8/122 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           EK +   H P    Q  + ++   D     + ++++   G E+ +G           + F
Sbjct: 127 EKPLFVYHFP--AEQASLAAINLKDPR--ISERFEIFFKGIELGNGFYELIDVNEQKKRF 182

Query: 509 SNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +  +             A   G+PP  G+A G+DR++ML+L  K++ EV  FP+
Sbjct: 183 IRDNKERRSMNLPIRKIDNFFLSALSYGLPPCSGVAIGLDRLIMLILNKKSIHEVIAFPV 242

Query: 565 SQ 566
            +
Sbjct: 243 DR 244



 Score = 39.3 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+AS     +QI   FR+++      P EF  L+    F      +  ++  L+ + 
Sbjct: 1   MKRLLASESGSIYQICHSFRNKELGRYHNP-EFTMLEWYQPFCSMKKFIKEIDIFLQIIL 59

Query: 262 E 262
           +
Sbjct: 60  K 60


>gi|154292327|ref|XP_001546739.1| hypothetical protein BC1G_14618 [Botryotinia fuckeliana B05.10]
 gi|150846194|gb|EDN21387.1| hypothetical protein BC1G_14618 [Botryotinia fuckeliana B05.10]
          Length = 460

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 76/200 (38%), Gaps = 47/200 (23%)

Query: 160 NFIECSTPILTASSPEGARDFLVPS--------RVNQGSFYALPQ----APQQYKQLLMA 207
           ++++   PI+T+S  EGA +             + + G+F+  P+    + Q + + L A
Sbjct: 123 DYVQTHPPIITSSDCEGAGEVFEVGSAHKGPVGKADDGTFFRSPKYLTVSSQLHLEAL-A 181

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE-QDDILNTMENVLRGVF----- 261
               R + ++P FR E   + R   EFY L+ E SFVE  D++++ +EN+LR +      
Sbjct: 182 QSVGRVWALSPTFRAEKSDTPRHLSEFYMLEAECSFVEKMDEVMDLVENMLRHLTTNLYS 241

Query: 262 ----EEFSNGN----------------------TVSNNFLRICYDDAIRRYGTDKPDLRN 295
                E                            +   + RI Y  AI            
Sbjct: 242 TQVGREILESKRSGDEEKDTINRRHELTRRWEGMIRGPWPRITYAQAIEELENSGQTFEY 301

Query: 296 PIIMHN--VTEHFVHSEFRV 313
           P +  +    EH  +   +V
Sbjct: 302 PPVWGSGLQAEHERYIANKV 321



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 25/158 (15%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSI 477
            +IA ++G+         ++ D+P             +  PF M       + G      
Sbjct: 315 RYIANKVGLG-----SPVFVTDYP------------KSIKPFYMLPSESSRVGGT---LE 354

Query: 478 KAFQYDL-VCNGFEIASGGIRNHM-SEVMLQAFSNVGISKEVVENRFG---GLYRAFQCG 532
               +DL V    EI  G +R +   E++    +N  +  +  E   G         + G
Sbjct: 355 TVQCFDLLVPEACEIVGGSMREYRLPELISAMRANGMVRGDAGEEELGSLKWYTELRRWG 414

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
             PHGG   G DR++  L G +N+RE+  FP      D
Sbjct: 415 SVPHGGFGLGFDRLLGYLSGVQNIREIVAFPSGFEARD 452


>gi|83310382|ref|YP_420646.1| hypothetical protein amb1283 [Magnetospirillum magneticum AMB-1]
 gi|82945223|dbj|BAE50087.1| Truncated possibly inactive lysyl-tRNA synthetase [Magnetospirillum
           magneticum AMB-1]
          Length = 348

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-------- 172
           PE    +   LDLR            R++N+ R    A +F E  TP L  S        
Sbjct: 9   PEVFARRKAALDLR-----------GRVVNATRAFFAARDFAEVETPCLQVSPGLEPHLK 57

Query: 173 --SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
             +   A  F  P R        L  +P+   + L+ +G  R +Q+A  FR+ +  +   
Sbjct: 58  AFATAFADPFGGPDR-----PLYLHTSPEFAMKKLLVAGVPRLYQLAKVFRNAERSATHH 112

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLR--------GVFEEFSNGNTVSNNFLRICYDDA 282
           P EF  L+   +    +D++   E ++R        G+             + R+   +A
Sbjct: 113 P-EFTMLEWYRAGASIEDLMADTEALVRDCAKAAGVGLLRRRGTTCDPFAPWRRLSVAEA 171

Query: 283 IRRY-GTDK----PDLRNPIIMHNVTE 304
              Y G D     PD  +P      TE
Sbjct: 172 FAEYAGIDVLASAPDPWSPDRSVLATE 198



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 4/98 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-VGISKEVVENRF---GGL 525
           + +      A +++    G E+ +            + F+  + + + +   R+      
Sbjct: 248 RPSPADPRVAERFEAYALGVELCNAFGELTDPAEQRRRFTADMDLKQALYGERYPLDEDF 307

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A   GMP   GIA G DR+VMLL G + + +V   P
Sbjct: 308 LTALDAGMPDSAGIALGFDRLVMLLAGTETIDDVLWAP 345


>gi|227513894|ref|ZP_03943943.1| possible lysine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087742|gb|EEI23054.1| possible lysine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 248

 Score = 87.8 bits (216), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 12/156 (7%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEW---NEEEKKIDFAHNPFTMPQGGMESLKGNDL 474
             +A + GI   + ++   I++  F+E    +  E+ I    +P  +          N+ 
Sbjct: 95  RKLADDNGIKYESWWKVGHIINA-FFEEKVQDTLEQPIFIYGHPVEVSPLAKI----NEE 149

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
            S    +++L   G E A+     +      + F           +           A +
Sbjct: 150 DSRFTDRFELYILGKEYANAFSELNDPIDQRKRFKAQAQENAEGNDEAQPIDEDFVEALE 209

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GMPP GG+  GIDR+VML+  AK++R+V LFP  +
Sbjct: 210 YGMPPTGGLGVGIDRMVMLMTDAKSIRDVLLFPTMR 245



 Score = 40.1 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/105 (9%), Positives = 36/105 (34%), Gaps = 8/105 (7%)

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           ++   FR+E       P EF  ++   ++ + +D++   E + +      ++   ++   
Sbjct: 1   ELGRIFRNEGMDPYHNP-EFDTMETYAAYFDFNDVMKETEGIFKAAAGVVADDLKITYQG 59

Query: 275 LRICYDDAIRRYGTDKP-------DLRNPIIMHNVTEHFVHSEFR 312
             + +  + +R             D    + +    +    +  +
Sbjct: 60  TELDFSTSFKRLHMVDAIKEATGIDFWQEMTVEEARKLADDNGIK 104


>gi|3248957|gb|AAD09938.1| lysyl-tRNA synthetase [Coxiella burnetii]
          Length = 209

 Score = 87.4 bits (215), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
            +E   EEK +         P+      + N+       +++    G EIA+G    +  
Sbjct: 80  LFETLVEEK-LQQPIFITHFPKELSPLSRANEENDFITDRFEFYVGGREIANGFSELNDP 138

Query: 502 EVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E     F     ++        +       A + G+PP  G   GIDR+VML     ++R
Sbjct: 139 EDQAARFREQLKARNAGDLEAMSFDEDYITALEYGLPPTAGEGIGIDRLVMLFTDNASIR 198

Query: 558 EVSLFP 563
           +V LFP
Sbjct: 199 DVILFP 204


>gi|330837283|ref|YP_004411924.1| Lysine--tRNA ligase [Spirochaeta coccoides DSM 17374]
 gi|329749186|gb|AEC02542.1| Lysine--tRNA ligase [Spirochaeta coccoides DSM 17374]
          Length = 356

 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 76/197 (38%), Gaps = 19/197 (9%)

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGA----RDFLVPSRVNQG 189
                +   +R+R++ +MR    +  ++E  TP+L+    PE              +   
Sbjct: 26  SRFNFQAAKQRSRLLKAMRSWFDSHGYLEVDTPLLSPDLIPEPTIHTFATTFSHEFLGSR 85

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
            FY +P +P+ + + L+A+G    +Q + CFR+ +        EF  L+      ++ D 
Sbjct: 86  EFYLVP-SPEVFMKKLLAAGSGSIYQFSHCFRNNEQIGSHHNPEFTMLEYYTLDADEQDS 144

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG-------TDKPDLRN-----PI 297
           +   E +L     + +  + +   F ++    A   Y         D  DLR       +
Sbjct: 145 MALTEELLAATAPK-NCPDHLLPPFRKMSMAAACHAYAGIDLEKNQDVRDLRRAALRLGL 203

Query: 298 IMHNVTEHFVHSEFRVF 314
            +    E +  +  R+F
Sbjct: 204 SLPEEPESWEDTFNRIF 220



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 8/106 (7%)

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG- 524
           +E L   D       ++++   G E+A+       ++ +   +           ++ G  
Sbjct: 243 IECLAAEDETGPWRKRWEMYAGGVELANCYDEMRDAQKIRAYYRKEYAKLSTERSQNGAV 302

Query: 525 -------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                      F    P   G+A G+DR++ML  G  +++ V LFP
Sbjct: 303 IPDADLSFADIFTKDFPRCSGVAMGMDRLLMLQTGITSLKGVILFP 348


>gi|313665428|ref|YP_004047299.1| hypothetical protein MSB_A0558 [Mycoplasma leachii PG50]
 gi|312949202|gb|ADR23798.1| conserved hypothetical protein [Mycoplasma leachii PG50]
          Length = 90

 Score = 87.4 bits (215), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 39/70 (55%)

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             +   N F+  W++DFP +E++E+E++   AH+PFTM +         +     A+ YD
Sbjct: 2   FNLAYPNEFKLLWVVDFPLFEYSEKEQRYLAAHHPFTMTKPESLDTFDVNKKDAIAYAYD 61

Query: 484 LVCNGFEIAS 493
           LV NGFEI  
Sbjct: 62  LVMNGFEIGG 71


>gi|284052903|ref|ZP_06383113.1| lysyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 228

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 25/142 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           E  +I+DFP  E +   K+           + G               +++L  +G E +
Sbjct: 107 EPTFIIDFPV-EVSPLAKR--------HRSKPGFVE------------RFELFIHGTEYS 145

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G    +      Q F      K+  ++          +A   GMP  GG+  G+DR+VM
Sbjct: 146 NGFSELNDPVDQRQRFEEQLAQKQAGDDEAHPMDEDFIQALSLGMPNCGGMGIGVDRLVM 205

Query: 549 LLLGAKNVREVSLFPMSQNFCD 570
            L   +++R+  LFP  ++F D
Sbjct: 206 FLTDTQSIRDAILFPTMRSFKD 227


>gi|90409366|ref|ZP_01217451.1| lysyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90309532|gb|EAS37732.1| lysyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 215

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 74/204 (36%), Gaps = 10/204 (4%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
              +G           +  +  + M   +S      +       + +A   +A+ L I  
Sbjct: 12  ETVLGSSVVKYGEEEFDFGKPFIRMTMKESILEYNDEIKAEELDSMEALQALAKRLNIHL 71

Query: 429 CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPF-TMPQGGMESL-KGNDLLSIKAFQYDLVC 486
            + +    +      E  EE  +       F T     +  L + +D       +++   
Sbjct: 72  KDNWGAGKV----LTEIFEETAEHKLMQPTFITAYPAEVSPLARRSDNDPDVTDRFEFFV 127

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAG 542
            G E+A+G    + ++   Q F +    K+  ++           A + G+PP  G   G
Sbjct: 128 GGRELANGFSELNDAQDQAQRFRDQVAQKDAGDDEAMFYDADYIVALEHGLPPTAGEGIG 187

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQ 566
           IDR+VML   +  +R+V LFP  +
Sbjct: 188 IDRLVMLFTDSHTIRDVLLFPHMR 211


>gi|328478117|gb|EGF47979.1| lysyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 114

 Score = 87.0 bits (214), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 6/101 (5%)

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG-- 523
           +      D   ++   +     G E A+     +      Q      +     E   G  
Sbjct: 13  LAKKNPKDPRFVERLNF---VGGGEYANAFTELNDPIDQRQRLKRKQLKTAGNEEAQGID 69

Query: 524 -GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                A + GMPP GG+  GIDR+VMLL  A ++R+V LFP
Sbjct: 70  DDYVEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFP 110


>gi|302187869|ref|ZP_07264542.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 87

 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAG 542
            G EIA+     + +E   + F      K+  ++          RA + GMPP  G   G
Sbjct: 1   GGREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIG 60

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQ 566
           IDR+VMLL  + ++R+V LFP  +
Sbjct: 61  IDRLVMLLTDSPSIRDVILFPHMR 84


>gi|125570422|gb|EAZ11937.1| hypothetical protein OsJ_01810 [Oryza sativa Japonica Group]
          Length = 560

 Score = 87.0 bits (214), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 66/179 (36%), Gaps = 12/179 (6%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G +  G  V + GWV   R  G     FL++ D    + +    D+A   +A    +   
Sbjct: 35  GAARAGERVVVGGWVKTGREQGKGTFAFLELNDGSCASNLQVLVDAAVHPLAPLTATGTS 94

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G     +    ++   +     ++     L   +    P+   +   E++R     
Sbjct: 95  VLVEGQAQEAAGAAPSSASSS-----ASTASSRLGEVDPAAYPLPKTKLTLENLRD---V 146

Query: 131 LDL--RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           + L  R +T+      R ++  +         F+   TPI+T S  EGA +    + + 
Sbjct: 147 VHLGSRTNTIGAVARIRHQLACATHRFFDENGFLYVHTPIITTSDCEGAGEMFQVTTLF 205



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 50/162 (30%), Gaps = 27/162 (16%)

Query: 186 VNQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
             +  F+   A      Q +    A      +   P FR E+  + R   EF+ ++ E++
Sbjct: 289 AYENDFFKRQAFLTVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIA 348

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVS---------------------NNFLRICYDD 281
           F    D +N  E  ++ + +                                F RI Y  
Sbjct: 349 FANLQDDMNCAERYVQYLCKWLLEHCREDMEFMVKNYDKTAIERLELVSSTPFQRISYTK 408

Query: 282 AIRRYGTD-KPDLRNPII--MHNVTEHFVHSEFRVFSKILSV 320
           A+            N +   +   +EH  +    +F K + V
Sbjct: 409 AVELLKNVTDKKFENKVEWGIDLASEHERYLTEVIFKKPVIV 450



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +++     + G+  E  E          + 
Sbjct: 465 NDDQKTVAAMDVLVPKVGELVGGSQREERLDLLKTRIQDAGLPLEPYE----WYLDLRRF 520

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   H G   G +R+++   G +N+R+V  FP      DL
Sbjct: 521 GSVKHSGFGLGFERMILFATGLENIRDVIPFPRYPGRADL 560


>gi|315305583|ref|ZP_07875288.1| lysyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313626048|gb|EFR95475.1| lysyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 216

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + K  +       +++L   G E A+     +  
Sbjct: 86  FFETFVEEKLIQPTFVYGHPIEISPLAKKNKEDGRF-TDRFELFIVGREHANAFSELNDP 144

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +   G       A + G+PP GG+  GIDR+VMLL  A ++R
Sbjct: 145 IDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIR 204

Query: 558 EVSLFPMSQNF 568
           ++ LFP  ++ 
Sbjct: 205 DILLFPTMKHR 215


>gi|270683880|ref|ZP_06222789.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270316274|gb|EFA28215.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 155

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 6/113 (5%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+++G +   R  G   F+ I+D  G  Q+    D+    +       W L   G ++ 
Sbjct: 49  EVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDL---GDIIG 105

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
                      T ++ +   ++++L+ A   PLP        + +R++ R+LD
Sbjct: 106 VKGTLF--KTKTNELTIKTTEVQLLTKALR-PLPDKFHGLTDQEVRYRQRYLD 155


>gi|15487831|gb|AAL00964.1|AF401676_1 L-lysyl tRNA synthetase [Lactobacillus sakei]
          Length = 141

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 6/134 (4%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           I++  F E+ E+   +      +  P       K N        +++L  +G E A+   
Sbjct: 1   IINAFFEEFVEDT--LVQPTFIYGHPVEISPLAKKNAEDDRFTDRWELFMHGNEYANAFT 58

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             +      + F      +E   +   G       A + GMPP GG+  GIDR+VMLL  
Sbjct: 59  ELNDPIDQRERFEAQAKERENGNDEAEGIDEDYVEALEYGMPPTGGLGIGIDRLVMLLTD 118

Query: 553 AKNVREVSLFPMSQ 566
           A ++R+V LFP  +
Sbjct: 119 AASIRDVLLFPTMR 132


>gi|238005676|gb|ACR33873.1| unknown [Zea mays]
          Length = 109

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 4/96 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQ 530
                 +++L  N  E+ +     +   V  Q F      ++  ++    L      A +
Sbjct: 11  RPGLTERFELFVNKHEVCNAYTELNDPVVQRQRFEEQLKDRQSGDDEAMALDETFCAALE 70

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            G+PP GG   GIDR+ MLL  ++N++EV LFP  +
Sbjct: 71  YGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFPAMK 106


>gi|147792043|emb|CAN72992.1| hypothetical protein VITISV_022939 [Vitis vinifera]
          Length = 160

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 9/107 (8%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
             +++L  N  E+ +     +   V  Q F+     ++  ++           A + G+P
Sbjct: 40  TERFELFVNKHELCNAYTELNDPVVQRQRFAEQLKDRQSGDDEAMALDETFCMALEYGLP 99

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSV 581
           P GG   GIDR+ M+L  ++N++EV LFP  +         PS+V  
Sbjct: 100 PTGGWGLGIDRLTMMLTDSQNIKEVLLFPAMKP-----QDEPSSVQP 141


>gi|315426530|dbj|BAJ48161.1| aspartyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 108

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 4/98 (4%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++  +     +  +DL+    E+ASGG R    +V+ +     G++       F    + 
Sbjct: 10  IQETEKDPRISESFDLMYQWLELASGGTRVSDHDVLERKLREKGLNP----AMFEDHLKV 65

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           F  GMP H G   G +R +M+L    N+RE  LFP  +
Sbjct: 66  FSYGMPVHAGWGLGFERFLMVLTRRTNIRETVLFPRDR 103


>gi|84994498|ref|XP_951971.1| asparaginyl-trna synthetase [Theileria annulata strain Ankara]
 gi|65302132|emb|CAI74239.1| asparaginyl-trna synthetase, putative [Theileria annulata]
          Length = 704

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 75/199 (37%), Gaps = 30/199 (15%)

Query: 21  VRLSGWVHRVRPH--GGIIFLDIRDHYGI--TQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           V++ GW   +R    G ++F+ + D       Q+V + DS  ++ A   +S   +  +G 
Sbjct: 143 VKVFGWCKSMRSQDGGRLLFVIVNDGSCKPNLQIVVHNDSKGYKEALKCKSGTSIQANGF 202

Query: 77  VMSRSAETINANIITGQ---------------------IELSAQK-----IEILSVAEEL 110
           +++R  +   A  ++ +                      EL         I++L +    
Sbjct: 203 LVNRVTQPKPAKEVSKENDSELQGEDRDYELLEDVSNRYELHITSDDSNYIQVLGLTNCP 262

Query: 111 PLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT 170
                 +++       +   L  R   +   +  R+ +  ++     ++NF   ++P++T
Sbjct: 263 GTYPIAKKDLTMEFLRENAHLRPRTYLISAVMRIRSSLSIAIHLFFQSKNFHYLNSPVIT 322

Query: 171 ASSPEGARDFLVPSRVNQG 189
            +  EGA +    + + + 
Sbjct: 323 TADCEGAGELFQVTTMFEN 341



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 40/97 (41%), Gaps = 6/97 (6%)

Query: 469 LKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           ++ ND     A   DL+     E+  G  R    + + ++     ++ +           
Sbjct: 606 MRRNDDDKTVA-AMDLIIPKIGELIGGSQREERFDYLEKSIKENKLNMQDYW----WYLD 660

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             + G   H G   G +R++M++ G +N+++V  FP 
Sbjct: 661 LRRYGTIVHSGFGLGFERLIMMVTGVQNIKDVIPFPR 697



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 31/91 (34%)

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           +      Q             +   P FR E+  ++R   EF+ ++ EM+ V+   ++  
Sbjct: 438 SFLTCSGQLSAENYCCSMGSVYTFGPTFRAENSHTNRHLSEFWMIEPEMTLVDLPGLMEL 497

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAI 283
            E  ++ +       N     F     D  +
Sbjct: 498 TEEFIKFLVNYILKHNYDDLVFFNNTVDKEL 528


>gi|148264203|ref|YP_001230909.1| tRNA synthetase, class II (D, K and N) [Geobacter uraniireducens
           Rf4]
 gi|146397703|gb|ABQ26336.1| tRNA synthetase, class II (D, K and N) [Geobacter uraniireducens
           Rf4]
          Length = 307

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 86/202 (42%), Gaps = 11/202 (5%)

Query: 145 RTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
           R+ II  +R   I E ++E  TP+ + A +PE   + +   R      + L  +P+   +
Sbjct: 17  RSTIIQEIRRFFIKEGYLEVDTPLRIPAPAPESYIEAIPSGR------WFLHTSPELCMK 70

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            ++A+G++R FQI  C+RD +    R   EF  L+      +  D+++  E ++R V   
Sbjct: 71  RMLAAGYERIFQICRCWRDGERGI-RHLPEFTMLEWYRIDADYRDLMSECEALIRSVIHV 129

Query: 264 FSNGNTVSNNFLRICYDDAIRRYGTDKPDLR-NPIIMHNVTEHFVHSEFRV--FSKILSV 320
             +G ++    + +  ++   +    +  +R N + M    E     E  V      L  
Sbjct: 130 LGHGGSIRYQGMAVEINEPWEKLTVSEAFIRYNGMTMAEALETDQFDEIMVRDIEPRLGF 189

Query: 321 NPGYEVWAIPAKGGGGNRAFCD 342
                ++  PA+ G   R   D
Sbjct: 190 GKPTFIYDYPAERGALARISKD 211



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 13/123 (10%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E ++ F    F              +      A +++L   G E+A+       ++    
Sbjct: 184 EPRLGFGKPTFIYDYPAERGALARISKDNPAVAERFELYIGGLELANAFSELTDAQEQRD 243

Query: 507 AFSNVGISKEVV-------ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
            F      +  +         +F          MPP  GIA G+DR+VM+LL   ++ +V
Sbjct: 244 RFVQESTFRASMNRATYPLPEKFLDELSD----MPPSAGIALGVDRLVMVLLDLSSIDDV 299

Query: 560 SLF 562
             F
Sbjct: 300 VAF 302


>gi|257439880|ref|ZP_05615635.1| aspartyl-tRNA synthetase [Faecalibacterium prausnitzii A2-165]
 gi|257197693|gb|EEU95977.1| aspartyl-tRNA synthetase [Faecalibacterium prausnitzii A2-165]
          Length = 264

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 28/128 (21%)

Query: 432 FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
            EF ++ D             D     F   +            +     YDL+  G EI
Sbjct: 153 HEFLFVTD------------YDAEKRAFYHMRDE----------NGVPQGYDLIWRGVEI 190

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
            +G  R H  EV+ +     G++++V           FQ G PPHGG   GIDR+ MLL+
Sbjct: 191 TTGAQREHRYEVLKKQAEEKGLAEDV-----KFYLEFFQYGCPPHGGFGLGIDRLTMLLV 245

Query: 552 GAKNVREV 559
           G +++++ 
Sbjct: 246 G-ESIKDA 252



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 68/189 (35%), Gaps = 14/189 (7%)

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
                  ++ ++ A  Q+PQ YKQ+ MA+GF+R F+  P FR E   +++   EF   D+
Sbjct: 1   MFKVDYFDRNAYLA--QSPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHATEFSGFDL 58

Query: 240 EMSFVE-QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           E S++    D++   E +L+   +   +             D     +G +      P  
Sbjct: 59  EFSYITSYKDVMAMEEQLLKAGLQAVKDAY----------GDQIQELFGKEVIVPETPFP 108

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAY 358
           +  + + +   E      +     G              +   +    +         A+
Sbjct: 109 VVKLADLYKGLEEDFGYVVDDSEKGDLTTEAERLSYDWVKKHYNHEFLFVTDYDAEKRAF 168

Query: 359 IFWRLDESG 367
              R DE+G
Sbjct: 169 YHMR-DENG 176


>gi|260886923|ref|ZP_05898186.1| lysine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260863352|gb|EEX77852.1| lysine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 216

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 11/131 (8%)

Query: 443 YEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           +E   EE  I       +P  +    +      D       +++    G E+A+G    +
Sbjct: 77  FEAKVEESLIQPTFITGHPTEISP--LAKRNPEDPR--ITDRFEFYVYGRELANGFTELN 132

Query: 500 MSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
                 + F      +E  ++           A + G+PP GG+  GIDR+VMLL  + +
Sbjct: 133 DPIDQKERFLEQVKQREAGDDEAHPMDSDFITAMEYGLPPTGGLGIGIDRLVMLLTDSSS 192

Query: 556 VREVSLFPMSQ 566
           +R+V  FP  +
Sbjct: 193 IRDVLFFPHMR 203


>gi|242399490|ref|YP_002994915.1| Asparaginyl-tRNA synthetase-related protein [Thermococcus sibiricus
           MM 739]
 gi|242265884|gb|ACS90566.1| Asparaginyl-tRNA synthetase-related protein [Thermococcus sibiricus
           MM 739]
          Length = 305

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 86/200 (43%), Gaps = 18/200 (9%)

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS----PEGARDFLVPSRV 186
           + L    + K I  +T++I+ +    + + F      +L++ +    P+ A   +    +
Sbjct: 8   VQLISRDIEKTIRVQTKLIDYLTDFFVKKGFKWLLPVMLSSITDPLWPDPASSKMRAPEI 67

Query: 187 N-QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDMEMSF 243
           +  G+   L  +   +KQ  +A G ++ F ++P  R E+   D  R   EF Q+D E+++
Sbjct: 68  DAYGTRLKLMHSMILHKQFAIAMGLEKIFVLSPNIRLEERDRDDGRHAYEFTQIDFEIAY 127

Query: 244 VEQDDILNTMENVLRGVFEEFSNGN--------TVSNNFLRICYDDAIRRYGTDKP---D 292
              DD+++ +E ++ G+F+E              V   F R    +    +G D+     
Sbjct: 128 ATMDDVMSLIEELIVGLFKEARTWEELGERDLPKVKVPFKRFTMAEIEEEFGDDEEASRA 187

Query: 293 LRNPIIMHNVTEHFVHSEFR 312
           +  P  + +++  F   E  
Sbjct: 188 MEEPFWITDISREFYDREDP 207



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 8/125 (6%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ-YDLVCN--GFEIASGGIRNHM 500
           E+ ++E+       PF +     E     D      F+ YDL+      E++SGG R   
Sbjct: 177 EFGDDEEASRAMEEPFWITDISREFYDREDPKRPGHFRNYDLILPEGYGEVSSGGEREWE 236

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCG-MPPHGGIAAGIDRIVMLLLGAKNVREV 559
            E +L+     G+S       F       + G + P  G   GI+R+V  ++GAK++ EV
Sbjct: 237 YEAILRKLKESGLSLRA----FRPYLEVAKAGKLKPSAGAGIGIERLVRYIVGAKHIAEV 292

Query: 560 SLFPM 564
             FP 
Sbjct: 293 QPFPR 297


>gi|169616432|ref|XP_001801631.1| hypothetical protein SNOG_11387 [Phaeosphaeria nodorum SN15]
 gi|160703180|gb|EAT81095.2| hypothetical protein SNOG_11387 [Phaeosphaeria nodorum SN15]
          Length = 506

 Score = 85.9 bits (211), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 74/206 (35%), Gaps = 16/206 (7%)

Query: 123 SIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDF 180
               +   +  L  D     +  R  + + +R   I+  F+E  TP    ++    AR F
Sbjct: 153 ETLARRPHIHALTSDEPGDVLRLRALVYDYIRTYFISSGFLEVETPTFDVNAGGAIARPF 212

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
              +     +   L  AP+   + ++  G D+ F+I   FR+E   +   P EF   +  
Sbjct: 213 ETIANELSNTSVRLRIAPELNLKRMIIGGQDKIFEIGRAFRNEGVDNTHNP-EFSTCEFY 271

Query: 241 MSFVEQDDILNTMENVLRGVFEEF------------SNGNTVSNNFLRICYDDAIRRY-G 287
                  D++   E ++ G+                +     S  F ++ +   I +  G
Sbjct: 272 EVGATLPDVIARTEQLIHGLHTAVESLRSTYFPTLAAPEVDFSGPFAQLPFIPTIEKESG 331

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRV 313
              PDL +P   + + + F   +  V
Sbjct: 332 RKLPDLLSPHASNEILDMFKDLDISV 357



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 37/110 (33%), Gaps = 2/110 (1%)

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
             H+P        +S          A + +L  N  E  +     +      + F     
Sbjct: 385 ITHHP-EALSPLSKSYLDPATSQRVASRVELFINSREYVNAYEEENSPFEQRRKFMQQLD 443

Query: 514 SKEVVENRFG-GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                E         A + GMPP GG   G+DR+VML    K + +V  F
Sbjct: 444 FHVDGEGAMDESYLEALEWGMPPTGGWGCGLDRLVMLFASKKRIADVLPF 493


>gi|86211231|gb|ABC87291.1| putative lysyl-tRNA synthetase [Ceratopteris richardii]
          Length = 194

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 8/114 (7%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           +P  M           DL      +++L  N  E+ +     +   V  Q F +   SK+
Sbjct: 68  HPRIMSPLAKWHRSIPDL----TERFELFVNRHEVCNAYTELNDPVVQRQCFLDQMKSKQ 123

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + ++           A + G+PP GG   GIDR  MLL  ++N++EV LFP  +
Sbjct: 124 LGDDEAMPIDESFCTALEYGLPPTGGWGMGIDRFTMLLTDSQNIKEVLLFPAMK 177


>gi|99034277|ref|ZP_01314329.1| hypothetical protein Wendoof_01000870 [Wolbachia endosymbiont of
          Drosophila willistoni TSC#14030-0811.24]
          Length = 94

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/73 (45%), Positives = 50/73 (68%)

Query: 1  MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
          M+ Y+TH+C +L  +DV   V LSGW++R R HG +IF+D+RD YGITQ+V N D   F+
Sbjct: 22 MNCYKTHTCEELRKNDVEKEVTLSGWLYRKRDHGNLIFVDLRDFYGITQLVFNNDKDFFD 81

Query: 61 IAKSVRSEWVLCI 73
             +++ E V+ +
Sbjct: 82 EISNLKLESVITV 94


>gi|3980155|emb|CAA43736.1| unnamed protein product [Mycoplasma genitalium]
          Length = 83

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/80 (33%), Positives = 44/80 (55%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +  N + FCW++DFP Y+++E+  +    HN F+ P+        ++     + Q+DLV 
Sbjct: 1   VKPNQYSFCWVVDFPLYDFDEKTNQWISNHNIFSKPKQEWIDNFESNKNEALSEQFDLVL 60

Query: 487 NGFEIASGGIRNHMSEVMLQ 506
           NGFEI SG IR +   V  +
Sbjct: 61  NGFEIGSGSIRINDPIVQKR 80


>gi|330720194|gb|EGG98579.1| Aspartyl-tRNA synthetase @ Aspartyl-tRNA(Asn) synthetase [gamma
           proteobacterium IMCC2047]
          Length = 55

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 20/48 (41%), Positives = 33/48 (68%)

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           +ML+ GA ++R+V  FP +Q+   ++  +PS VS EQLREL +R+ + 
Sbjct: 1   MMLMTGAASIRDVIAFPKTQSAACVMTDAPSEVSQEQLRELSIRVRKP 48


>gi|270669268|ref|ZP_06222588.1| asparagine-tRNA ligase [Haemophilus influenzae HK1212]
 gi|270316588|gb|EFA28415.1| asparagine-tRNA ligase [Haemophilus influenzae HK1212]
          Length = 160

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 43/129 (33%), Gaps = 17/129 (13%)

Query: 169 LTASSPEGARDFLVPSRVNQG--------------SFYAL---PQAPQQYKQLLMASGFD 211
           +TAS  EGA +    S ++                 F+          Q      A    
Sbjct: 24  ITASDTEGAGEMFRVSTLDLENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACALS 83

Query: 212 RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
           + +   P FR E+  + R   EF+ ++ E++F    D     E++L+ VF          
Sbjct: 84  KIYTFGPTFRAENSNTTRHLAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDD 143

Query: 272 NNFLRICYD 280
             F     D
Sbjct: 144 LQFFEKHVD 152


>gi|313635100|gb|EFS01445.1| lysyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 166

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 5/131 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E   EEK I          +    + K  +       +++L   G E A+     +  
Sbjct: 36  FFETFVEEKLIQPTFVYGHPVEISPLAKKNKEDERF-TDRFELFIVGREHANAFSELNDP 94

Query: 502 EVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               + F      +E   +   G       A + G+PP GG+  GIDR+VMLL  A ++R
Sbjct: 95  IDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIR 154

Query: 558 EVSLFPMSQNF 568
           ++ LFP  ++ 
Sbjct: 155 DILLFPTMKHR 165


>gi|59801828|ref|YP_208540.1| putative aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|59718723|gb|AAW90128.1| putative aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 84

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 1/79 (1%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSA-CFEIAK 63
          RT+ CG +    +   V + GWVHR R HGG+IF+D+RD  GI QVV +PD+   F  A 
Sbjct: 2  RTNYCGLISEQYLCQTVTVKGWVHRRRDHGGVIFIDLRDREGIVQVVIDPDTPEAFAAAD 61

Query: 64 SVRSEWVLCIDGLVMSRSA 82
          S R+E+VL I G V +R  
Sbjct: 62 SARNEYVLGIAGRVRNRPK 80


>gi|325970662|ref|YP_004246853.1| lysine--tRNA ligase [Spirochaeta sp. Buddy]
 gi|324025900|gb|ADY12659.1| Lysine--tRNA ligase [Spirochaeta sp. Buddy]
          Length = 330

 Score = 85.1 bits (209), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 17/193 (8%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFL---VPSRVNQGSFYA 193
           +      R+ +  ++R      ++ E  TPIL T   PE   +       +     +   
Sbjct: 1   MKAAAKFRSILYRNIRSFFDERDYTEVDTPILSTTLIPESTIENFSTRFQNPFLPSTELY 60

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A G    +QI  CFR+ +        EF  L+      ++++ +   
Sbjct: 61  LVPSPEIFMKQLIARGLGSVYQIGHCFRNSEQLGHIHNPEFSMLEYYTVGADEEESIRIT 120

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD------------LRNPIIMHN 301
           E +   +  +  +   +   F R+   +A+++Y     D             R  + + +
Sbjct: 121 EELFASLLPK-DSPKYLRPPFARLSVAEAMQQYAGVDLDKHQKQATLAQEAKRLGLTLPD 179

Query: 302 VTEHFVHSEFRVF 314
             E +  +  R+F
Sbjct: 180 EPESWEETFNRIF 192



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 27/162 (16%)

Query: 421 AQELGII---NCNCFEFCWIMDFPFY-EWN-EEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           A+ LG+        +E  +   F  + E N  +E  +     P       +E L   D  
Sbjct: 170 AKRLGLTLPDEPESWEETFNRIFLTFVEPNLPQESPLVLERYP-----KQIECLAQQD-- 222

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHM-----------SEVMLQAFSNVGISKEVVENRFGG 524
                +++L   G E+A+    +                ++Q     G     V+     
Sbjct: 223 GAYRRRWELYVKGVEVANCYDEDRDQATIQAYYRDEYARLVQKREESGTVIPDVDPSLAS 282

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           ++ A    MPP  G+A G+DR+ MLL+G  ++  V LFP+S 
Sbjct: 283 VFSA----MPPCSGVAMGLDRLQMLLMGKSDLEGVILFPLSG 320


>gi|71279363|ref|YP_271407.1| hypothetical protein CPS_4763 [Colwellia psychrerythraea 34H]
 gi|71145103|gb|AAZ25576.1| conserved hypothetical protein TIGR00462 [Colwellia psychrerythraea
           34H]
          Length = 325

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 88/227 (38%), Gaps = 28/227 (12%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR--------DFLVPSRVNQGSF 191
           +N  KR +I+  +R      N +E  TP L+  +             DFL  S V   + 
Sbjct: 10  QNAQKRAKILQQIRQFFAERNVVEVETPSLSQGTVTDVYLNALSCKYDFLADSPVGHSTE 69

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  +P+ + + L+ASG+   FQIA  FR E+   +  P EF  L+      +Q D+++
Sbjct: 70  LFLQTSPEFHMKRLLASGYGCIFQIAKAFRHEESGKNHNP-EFTMLEWYRIGFDQFDLMS 128

Query: 252 TMENVL--------------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
            + ++L              + +F +  + + ++  F  +     + +YG     L   +
Sbjct: 129 EVADLLQVVLGGDKAIFTSYQDIFLKTVSVDPLTATFDELTE--VLNKYGKSADWL---V 183

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRM 344
            M++           +    + ++    ++  P       +   D +
Sbjct: 184 EMNDADLLLQFIFTEIIEPTIGIDAPQFIYDFPIAQASLAKKSIDDL 230



 Score = 60.5 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 51/143 (35%), Gaps = 18/143 (12%)

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           L  I     E    +D P + ++            F + Q  +     +DL    A +++
Sbjct: 192 LQFIFTEIIEPTIGIDAPQFIYD------------FPIAQASLAKKSIDDLR--VAQRFE 237

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGI 539
               G E+ +G      +      F      +      V+        A   G+P   G+
Sbjct: 238 CYFKGIELVNGFNELTDANEQQVRFEEDNAKRAAQGLAVKPIDENFIAALNHGLPQCSGV 297

Query: 540 AAGIDRIVMLLLGAKNVREVSLF 562
           A GIDR+VML L  K + EV  F
Sbjct: 298 ALGIDRLVMLALDIKTISEVQSF 320


>gi|222055870|ref|YP_002538232.1| tRNA synthetase class II (D K and N) [Geobacter sp. FRC-32]
 gi|221565159|gb|ACM21131.1| tRNA synthetase class II (D K and N) [Geobacter sp. FRC-32]
          Length = 307

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 49/231 (21%), Positives = 93/231 (40%), Gaps = 14/231 (6%)

Query: 145 RTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
           R+ II  +R       ++E  TP+ + A +PE   D +          + L  +P+   +
Sbjct: 17  RSLIIQKIRQFFNEGGYLEVDTPLRIPAPAPESHIDAVPSGN------WFLQTSPELCMK 70

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            ++A+G++R FQI  C+RD + R  R   EF  L+      +  D+++  E ++R +   
Sbjct: 71  RMLAAGYERIFQICRCWRDGE-RGKRHLPEFTMLEWYRLESDYRDLMDDCEALVRFLSCA 129

Query: 264 FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKI---LSV 320
                 +S     I  +    +   ++  LR   +     E     +  + + I   L +
Sbjct: 130 IHKNAGISYLGKTIELEAPWEKITVEEAFLRYTAMSVEEAEEKDLFDELMVNDIEPNLGI 189

Query: 321 NPGYEVWAIPAKGGGGNR--AFCDRMNE-WARSQGQPGLAYIFWRLDESGN 368
           N    ++  PA  G   R      ++ E +    G   LA  F  L++S  
Sbjct: 190 NRPTFIYDYPAARGALARLKKENGKLAERFELYMGGIELANGFSELNDSQE 240



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ---CGMP 534
            A +++L   G E+A+G    + S+   + F+  G  +  +      L   F     GM 
Sbjct: 215 LAERFELYMGGIELANGFSELNDSQEQRERFAKEGEFRASMGKTAYPLPDRFLDELSGMG 274

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           P  GIA G+DR+VMLLL  + +  V  F
Sbjct: 275 PAAGIALGVDRLVMLLLDVQEIDGVVSF 302


>gi|302759579|ref|XP_002963212.1| hypothetical protein SELMODRAFT_79569 [Selaginella moellendorffii]
 gi|300168480|gb|EFJ35083.1| hypothetical protein SELMODRAFT_79569 [Selaginella moellendorffii]
          Length = 287

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 4/88 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR----FGGLYRAFQCGMPP 535
             ++L   G E+A+           ++A  +    +   ++           A + GMPP
Sbjct: 194 EGFELYICGRELANAFSELTDPIEQVRALVSPCHPQHKNDSYEVTLDEDFLTALEYGMPP 253

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             G+  GIDR+VMLL  + ++ +V  FP
Sbjct: 254 TAGMGIGIDRLVMLLTDSPSIGDVIAFP 281



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
              AR  +      +     L  A + + + +     +R  ++   FR+E   +   P E
Sbjct: 7   GADARPSITHHNSVERDL-VLRIATELHLKWVPV---ERVDELGRIFRNEGISTRHNP-E 61

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
           F  +++  ++ + +D++   E+++    E     
Sbjct: 62  FTSMEIYQAYADYNDMMALAEDLIAKCAEAILGN 95


>gi|57234352|ref|YP_181595.1| lysyl-tRNA synthetase-related protein [Dehalococcoides ethenogenes
           195]
 gi|57224800|gb|AAW39857.1| lysyl-tRNA synthetase-related protein [Dehalococcoides ethenogenes
           195]
          Length = 309

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 13/203 (6%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQ 199
           N+ +R +I+  +R     + F+E  TP+   + +PE    ++ P     G    L  +P+
Sbjct: 15  NLKRRMQILGWIRSFFNEQGFLEVETPVFVPAVAPE---RYIKPVECQSG---YLSTSPE 68

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            Y + ++A+G+ + +QI+ CFRD +      P EF  L+   +  +   ++   EN+   
Sbjct: 69  LYMKRMLAAGYAKIYQISRCFRDGEKGRQHNP-EFSLLEWYRAGADYLQMIKDTENLFHY 127

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL----RNPIIMHNVTEHFVHSEFRVFS 315
           +  + S    V      I      +R       L     +P+ + +          +V  
Sbjct: 128 IAIKLSGKPLVRYMAKEIDLMPPWKRITVQDAFLTAAGWDPLSVDDEKRFDDDLVLKVIP 187

Query: 316 KILSVNPGYEVWAIPAKGGGGNR 338
              S  P   +   PAK     R
Sbjct: 188 SFPSEQPTV-LMDYPAKMASLAR 209



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 7/108 (6%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +      +  +K       +  ++    +G E+A+              F+      E  
Sbjct: 200 YPAKMASLARIKETKPEVAERAEF--FISGLEMANAYSELTDPLEQASRFAGEKRLIETE 257

Query: 519 ENR----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +NR          + +  +P   G A GIDR+VM      ++++V  F
Sbjct: 258 QNRRVVSPDKFLESMKY-LPACAGNALGIDRLVMFFCNTDSIQDVIPF 304


>gi|224532540|ref|ZP_03673164.1| asparagine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512530|gb|EEF82907.1| asparagine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 140

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 54/135 (40%), Gaps = 12/135 (8%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVLC 72
           + S V ++GW+   R +G I F++I D   +  + A      +    +  K + +   + 
Sbjct: 14  LNSNVTINGWIRTKRSNGKIGFIEINDGSTLKGIQAVINEEENQFSEKDLKKLTTGTSIS 73

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           + GL++   A+  N        E+      ++   +    P+  +R   E +R +   L 
Sbjct: 74  LTGLLVESPAKGQN-------YEIKTHSFNVIGETDPETYPLQKKRHSFEFLR-EIPHLR 125

Query: 133 LRRDTLHKNIVKRTR 147
           +R +T       R +
Sbjct: 126 IRTNTFGAIARVRNK 140


>gi|309800496|ref|ZP_07694649.1| lysyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308115876|gb|EFO53399.1| lysyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 104

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 3/99 (3%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHK-NIVKRTRIIN 150
           G++ + A  I  LS A   PLP            ++ R+LDL  +       V R++II+
Sbjct: 6   GELSIKATHITHLSKALR-PLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIIS 64

Query: 151 SMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
            +R  +  + F+E  TP+L   +    AR F+      +
Sbjct: 65  EIRRYLDQKGFLEVETPVLHNEAGGAAARPFITHHNAQK 103


>gi|94265194|ref|ZP_01288956.1| tRNA synthetase, class II (G, H, P and S):tRNA synthetase, class II
           (D, K and N) [delta proteobacterium MLMS-1]
 gi|93454335|gb|EAT04642.1| tRNA synthetase, class II (G, H, P and S):tRNA synthetase, class II
           (D, K and N) [delta proteobacterium MLMS-1]
          Length = 355

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 8/113 (7%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQA 197
             N+  R  +I ++R      +++E  TP+L  + +PE     L+P R  +   + L  +
Sbjct: 1   MHNLWLRAAMIRAIRRFFEQRHYLEVETPLLIPAPAPE---PHLLPQRAGK---WFLQTS 54

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           P+   + L+A G  R +QI  CFR ++ R  R   EF  L+   +  +  D++
Sbjct: 55  PEICMKRLLARGIPRIYQICKCFRRQE-RGRRHLPEFTMLEWYRAGADYYDLM 106



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 3/94 (3%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ- 530
           +      A +++L   G E+A+G    +        F+    +      R   L R F  
Sbjct: 257 SPHNPAVAERFELYIAGIELANGFSELNDPVEQQCRFTRDRAAIRAAGRRPPPLPRRFLE 316

Query: 531 --CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               MPP  GIA GIDR+ M   GA+++ ++  F
Sbjct: 317 ELHAMPPAAGIALGIDRLAMFFAGAESIDQLQAF 350


>gi|326491469|dbj|BAJ94212.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326502506|dbj|BAJ95316.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 220

 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 6/114 (5%)

Query: 459 FTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F +    + S     +   S    +++L  N  E+ +     +   V  Q F +   S++
Sbjct: 102 FIINHPEIMSPLAKWHRTQSGLTERFELFINKHEVCNAYTELNDPLVQRQRFEDQLRSRQ 161

Query: 517 VVENRFGGLYRAF----QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             ++    L  AF    +  +PP GG   GIDRI MLL  ++N++EV LFP  +
Sbjct: 162 SGDDEAMALDEAFCTALEYALPPTGGWGMGIDRIAMLLTDSQNIKEVLLFPTMK 215


>gi|62182793|ref|YP_219210.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161617615|ref|YP_001591580.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167553566|ref|ZP_02347315.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168231380|ref|ZP_02656438.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168237075|ref|ZP_02662133.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168467060|ref|ZP_02700908.1| lysyl-tRNA synthetase homolog GenX [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|194446410|ref|YP_002043602.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194470854|ref|ZP_03076838.1| lysyl-tRNA synthetase homolog GenX [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194738327|ref|YP_002117289.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|204927009|ref|ZP_03218211.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|224586188|ref|YP_002639987.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|75478917|sp|Q57GN3|SYK3_SALCH RecName: Full=Uncharacterized protein YjeA
 gi|189082342|sp|A9N413|YJEA_SALPB RecName: Full=Uncharacterized protein YjeA
 gi|238693595|sp|B4T2Q3|SYK3_SALNS RecName: Full=Uncharacterized protein YjeA
 gi|238693673|sp|B4TSD9|SYK3_SALSV RecName: Full=Uncharacterized protein YjeA
 gi|254782466|sp|C0Q6B6|SYK3_SALPC RecName: Full=Uncharacterized protein YjeA
 gi|62130426|gb|AAX68129.1| putative pyruvate oxidase (lysyl-tRNA synthetase) [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161366979|gb|ABX70747.1| hypothetical protein SPAB_05475 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194405073|gb|ACF65295.1| putative lysyl-tRNA synthetase homolog GenX [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194457218|gb|EDX46057.1| lysyl-tRNA synthetase homolog GenX [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194713829|gb|ACF93050.1| lysyl-tRNA synthetase homolog GenX [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195630612|gb|EDX49224.1| lysyl-tRNA synthetase homolog GenX [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197290011|gb|EDY29370.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|204323674|gb|EDZ08869.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205322019|gb|EDZ09858.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205334355|gb|EDZ21119.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|224470716|gb|ACN48546.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|322615510|gb|EFY12430.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322618570|gb|EFY15459.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322622017|gb|EFY18867.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322627089|gb|EFY23881.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322631048|gb|EFY27812.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322637733|gb|EFY34434.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322642397|gb|EFY39001.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322645658|gb|EFY42183.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322650502|gb|EFY46910.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322653454|gb|EFY49784.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322659719|gb|EFY55962.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322662070|gb|EFY58286.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322666181|gb|EFY62359.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322672601|gb|EFY68712.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322676031|gb|EFY72102.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322680515|gb|EFY76553.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322684591|gb|EFY80595.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|322717294|gb|EFZ08865.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323192906|gb|EFZ78132.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323197218|gb|EFZ82358.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323201665|gb|EFZ86729.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323206179|gb|EFZ91141.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323213188|gb|EFZ97990.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323215561|gb|EGA00305.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323219546|gb|EGA04031.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323227849|gb|EGA12003.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323229019|gb|EGA13148.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323236369|gb|EGA20445.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323237511|gb|EGA21572.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323241823|gb|EGA25852.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323248028|gb|EGA31965.1| poxB regulator PoxA [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323254641|gb|EGA38452.1| poxB regulator PoxA [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323258300|gb|EGA41977.1| poxB regulator PoxA [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323259577|gb|EGA43211.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323265850|gb|EGA49346.1| poxB regulator PoxA [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323270294|gb|EGA53742.1| poxB regulator PoxA [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 325

 Score = 84.3 bits (207), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 10/178 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGMNLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +L+ V + + +   +    F R      I     DK  LR      +++      E R
Sbjct: 134 LLQQVLDCQPAESLSYQQAFQR---HLEIDPLSADKTQLREAAAKLDLSNIADTEEDR 188



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 66/199 (33%), Gaps = 28/199 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
           +++      +HL I    A + +L             D  +           +  E  I 
Sbjct: 146 SLSYQQAFQRHLEIDPLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIG 205

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                +  +I  FP                     Q  +  +   D     A ++++   
Sbjct: 206 KE---KPTFIYHFP-------------------ASQASLAQISTEDHR--VAERFEVYYK 241

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGI 543
           G E+A+G      +    Q F      +       +     L  A   G+P   G+A G+
Sbjct: 242 GIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVALGV 301

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR+VML LGA+++ +V  F
Sbjct: 302 DRLVMLALGAESLADVIAF 320


>gi|224370199|ref|YP_002604363.1| LysS2 [Desulfobacterium autotrophicum HRM2]
 gi|223692916|gb|ACN16199.1| LysS2 [Desulfobacterium autotrophicum HRM2]
          Length = 299

 Score = 84.0 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 8/152 (5%)

Query: 145 RTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
           R RI+ +MR     ++F+E  TPI + A +PE   D        +   + L  +P+   +
Sbjct: 9   RARIVQAMRSYFYDQDFLEVETPIRIPAPAPEAHIDSF------ESDGWFLQSSPELAMK 62

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            L+A G +R FQI  CFR ++ R  R   E   L+         ++++    ++R +  +
Sbjct: 63  RLLARGHNRIFQICKCFRRDE-RGPRHLTELTMLEWYTKGYTYLELMDQCTALVRHIAVQ 121

Query: 264 FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
               + +S N   I           D    R 
Sbjct: 122 TGCKDRLSYNGQTIDLASPWEVITVDTAFRRY 153



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 6/124 (4%)

Query: 443 YEWNEEEKKIDFAHNP-FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           +E   E  +        +      +  LK  D     A +++L   G E+A+G    +  
Sbjct: 173 FEIEPELGRSVPTFIMDYPASMAALARLKPEDPE--FAERFELYIGGMELANGFSELNDP 230

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQ---CGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
               + F      +         +   F      MP   GIA G+DR+VML   A  + +
Sbjct: 231 VEQRRRFKAEAAIRARARKPATPMPEPFLKDLTSMPAAAGIALGVDRLVMLFTHADTIDK 290

Query: 559 VSLF 562
           V  F
Sbjct: 291 VVAF 294


>gi|297171359|gb|ADI22363.1| lysyl-tRNA synthetase (class II) [uncultured nuHF2 cluster
           bacterium HF0500_02A10]
          Length = 236

 Score = 84.0 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 6/110 (5%)

Query: 459 FTMPQGGMESLKGNDLL--SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           F M      S              +++L   G EI +     +      + F N    +E
Sbjct: 121 FVMDHPKDISPLAKSHRDKPDLTERFELFIAGEEICNAFSELNDPIDQRERFENQIKLRE 180

Query: 517 VVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             ++          RA + GMPP GG+  GIDR+ M+L    ++R+V LF
Sbjct: 181 AGDDETHPLDEDYIRALEYGMPPTGGLGMGIDRLTMILTDQVSIRDVILF 230


>gi|321223219|gb|EFX48289.1| Lysyl-tRNA synthetase-related protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
          Length = 325

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 74/178 (41%), Gaps = 10/178 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R      +QGS   L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGSNLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +L+ V + + +   +    F R      I     DK  LR      +++      E R
Sbjct: 134 LLQQVLDCQPAESLSYQQAFQR---HLEIDPLSADKTQLREAAAKLDLSNIADTEEDR 188



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 66/199 (33%), Gaps = 28/199 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
           +++      +HL I    A + +L             D  +           +  E  I 
Sbjct: 146 SLSYQQAFQRHLEIDPLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIG 205

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                +  +I  FP                     Q  +  +   D     A ++++   
Sbjct: 206 KE---KPTFIYHFP-------------------ASQASLAQISTEDHR--VAERFEVYYK 241

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGI 543
           G E+A+G      +    Q F      +       +     L  A   G+P   G+A G+
Sbjct: 242 GIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVALGV 301

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR+VML LGA+++ +V  F
Sbjct: 302 DRLVMLALGAESLADVIAF 320


>gi|77920084|ref|YP_357899.1| hypothetical protein Pcar_2490 [Pelobacter carbinolicus DSM 2380]
 gi|77546167|gb|ABA89729.1| truncated, possibly inactive, lysyl-tRNA synthetase(class II),
           putative [Pelobacter carbinolicus DSM 2380]
          Length = 304

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 68/155 (43%), Gaps = 13/155 (8%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQA 197
              + +R RI+ ++R   +  +F+E  TP  +  ++PE            Q   + L  +
Sbjct: 12  RTRLEQRARIVQTIRSFFVGRDFLEVETPHRIPGNAPEA------HIDAVQSDDWFLHTS 65

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+   + L+A+G+ + FQ+  C+R  +  S R   EF  L+   +  +   ++   E++L
Sbjct: 66  PELCMKRLLAAGYPQLFQLCRCWRAAERGS-RHLPEFTMLEWYAAGCDYHTLMEQCESLL 124

Query: 258 RGV-----FEEFSNGNTVSNNFLRICYDDAIRRYG 287
             +              ++  + R+  D+A  RYG
Sbjct: 125 ATLLPGGNLTYRGQTIDLTPPWERLTVDEAFDRYG 159



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 44/125 (35%), Gaps = 13/125 (10%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKG--NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
           E E ++      F M      +     +      A +++L   G E+A+           
Sbjct: 179 EIEPRLGIGKPTFLMEYPAELAALARRHPERPHVAERFELYIAGLELANAFSELTDPVEQ 238

Query: 505 -------LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                       + G        +F     A    MP   GIA G+DR+VML+ GA+ + 
Sbjct: 239 RGRFVAEEAMRRDTGKPPYPSPEKFLRELEA----MPEAAGIALGVDRLVMLITGAETID 294

Query: 558 EVSLF 562
           E+  F
Sbjct: 295 EIVAF 299


>gi|313625399|gb|EFR95176.1| lysyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 117

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 4/103 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K N        +++L   G E A+     +      + F      +E   +   G     
Sbjct: 14  KKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRERFEAQMKEREQGNDEAHGMDADF 73

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             A + G+PP GG+  GIDR+VMLL  A ++R++ LFP  ++ 
Sbjct: 74  LEALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKHR 116


>gi|254482632|ref|ZP_05095870.1| tRNA synthetase class II (D, K and N) subfamily protein [marine
           gamma proteobacterium HTCC2148]
 gi|214036991|gb|EEB77660.1| tRNA synthetase class II (D, K and N) subfamily protein [marine
           gamma proteobacterium HTCC2148]
          Length = 317

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 64/159 (40%), Gaps = 10/159 (6%)

Query: 411 SFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLK 470
           +  AD R    QEL + + +  +  W +D       E   ++      F       ++  
Sbjct: 157 ASLADLRLRAQQELDLGSLDGDKDLW-LDLLMSHLIE--PRLAARGLCFVYDYPASQAAL 213

Query: 471 GNDLLS---IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFG 523
            N +     +   +++L  +G E+A+G           + F      +       +    
Sbjct: 214 SNIVEKDGQLLGQRFELYVDGLELANGYSELTDPAEQRRRFQADNTRRRDTGFDEKPVDE 273

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            L  A + GMP   G+A G DR++MLL G++++R+V  F
Sbjct: 274 RLLAALEAGMPQCSGVALGFDRLLMLLTGSEDIRQVLAF 312



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 56/125 (44%), Gaps = 3/125 (2%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSR-VNQGSFYALPQAP 198
            +  R  +++S+R    A + +E  TP+L ++   + A + L+  R  +  S + L  +P
Sbjct: 11  MLRARAALLDSVREFFAARHVLEVETPLLCSAGVTDPAIEPLIVERGSSLHSPHYLQTSP 70

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L+A+G    +Q+   FRD +      P EF  L+      +   ++  +  ++ 
Sbjct: 71  EYAMKRLLAAGSGPIYQLTKAFRDGEAGVRHNP-EFTLLEWYRPDHDYHQLMREVAELVC 129

Query: 259 GVFEE 263
               E
Sbjct: 130 SCLGE 134


>gi|313611206|gb|EFR86012.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 106

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 4/103 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
           K N        +++L   G E A+     +      + F      +E   +   G     
Sbjct: 3   KKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRERFEAQMKEREQGNDEAHGMDADF 62

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
             A + G+PP GG+  G+DR+VMLL  A ++R++ LFP  ++ 
Sbjct: 63  LEALEYGLPPTGGLGIGVDRLVMLLTNAPSIRDILLFPTMKHR 105


>gi|157147871|ref|YP_001455190.1| lysyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|166229783|sp|A8AMP1|SYK3_CITK8 RecName: Full=Uncharacterized protein YjeA
 gi|157085076|gb|ABV14754.1| hypothetical protein CKO_03677 [Citrobacter koseri ATCC BAA-895]
          Length = 325

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 72/178 (40%), Gaps = 10/178 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 15  NLLKRAAIMTEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGMNLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLVAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +L+ V E + +   +    F R      I     DK  LR      +++      E R
Sbjct: 134 LLQQVLECQPAESLSYQQVFQR---HLEIDPLSADKTQLREAAAKLDLSNIADTEEDR 188



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 7/114 (6%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G      +    Q F    
Sbjct: 210 TFVYH-FPASQASLAQISTEDHR--VAERFEVYFKGIELANGFHELTDAREQQQRFEQDN 266

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             +       +     L  A + GMP   G+A G+DR+VML LGA+++ EV  F
Sbjct: 267 RKRAARGLPQQPIDNNLLEALKVGMPDCSGVALGVDRLVMLALGAESLAEVIAF 320


>gi|260599492|ref|YP_003212063.1| poxB regulator PoxA [Cronobacter turicensis z3032]
 gi|260218669|emb|CBA34009.1| Putative lysyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 325

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 10/178 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGINLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVYQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +L+ V E + +   +    F R      I     DK  LR      +++      E R
Sbjct: 134 LLQQVLECQPAETISYQQAFQR---HLEIDPLSADKTQLREVAAKLDLSNIADTEEDR 188



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 7/116 (6%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +  F ++ F   Q  +  +   D     A ++++   G E+A+G      +    Q F  
Sbjct: 208 RPVFVYH-FPASQAALAQISTEDHR--VAERFEVYYKGIELANGFHELTDAREQQQRFEQ 264

Query: 511 VGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               +       +     L  A + G+P   G+A G+DR++ML LGA+++ +V  F
Sbjct: 265 DNRKRLQRGLPQQPVDYNLLEALKAGLPDCSGVALGVDRLIMLALGAESLADVIAF 320


>gi|76156335|gb|AAX27553.2| SJCHGC05024 protein [Schistosoma japonicum]
          Length = 242

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 7/140 (5%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
           V +SG VH  R  G  +IF DIR      QV+AN      E      +E +    G ++ 
Sbjct: 106 VSISGRVHAKRSAGSKLIFYDIRSEDCRLQVMANIRHYKSEAEFHAINEVIHL--GDIIG 163

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTL 138
            +     + +  G++ +   +I +LS      LP        +  RF+ R+LD L  + +
Sbjct: 164 CAGSPGKSKL--GELSIIPHEITLLSPCL-YQLPHMHYGVKDKETRFRQRYLDLLMNEEV 220

Query: 139 HKNIVKRTRIINSMRCRMIA 158
            +  + R RI+N +R  +  
Sbjct: 221 RRRFITRARIVNYVRKFLDD 240


>gi|283834777|ref|ZP_06354518.1| lysyl-tRNA synthetase [Citrobacter youngae ATCC 29220]
 gi|291069023|gb|EFE07132.1| lysyl-tRNA synthetase [Citrobacter youngae ATCC 29220]
          Length = 325

 Score = 84.0 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  II  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 15  NLLKRAAIIAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGMNLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    +Q+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLVAGCGPVYQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 134 LLQQVLD 140



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 7/114 (6%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G      +    Q F    
Sbjct: 210 TFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDAREQQQRFEQDN 266

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             +       +     L  A + GMP   G+A G+DR+VML LGA+++ EV  F
Sbjct: 267 RKRAARGLPQQPIDNNLLEALKVGMPDCSGVALGVDRLVMLALGAESLAEVIAF 320


>gi|237729093|ref|ZP_04559574.1| lysyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226908822|gb|EEH94740.1| lysyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 325

 Score = 84.0 bits (206), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  II  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 15  NLLKRAAIIAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGMNLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    +Q+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLVAGCGPVYQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 134 LLQQVLD 140



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 7/114 (6%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G      +    Q F    
Sbjct: 210 TFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDAREQQQRFEQDN 266

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             +       +     L  A + GMP   G+A G+DR+VML LGA+++ EV  F
Sbjct: 267 RKRAARGLPQQPIDTNLLEALKVGMPDCSGVALGVDRLVMLALGAESLAEVIAF 320


>gi|297835780|ref|XP_002885772.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297331612|gb|EFH62031.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 119

 Score = 83.6 bits (205), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 50/109 (45%), Gaps = 1/109 (0%)

Query: 123 SIRFKYRFLDL-RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
             R++ R+LDL   + +H  ++ ++ ++  ++  +  + F+E  T +++ S   GA    
Sbjct: 1   ENRYRKRYLDLMINEDIHNILLGKSNVMKYIQTFLSNKIFVEVETLVMSVSVGGGAVLPY 60

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                N+     L  A + Y + L+  GF R F+I   FR++       
Sbjct: 61  SVYHKNKNIKTYLRIAQEIYLKKLVVGGFGRVFEIGKQFRNDRENKTTH 109


>gi|56416139|ref|YP_153214.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197365065|ref|YP_002144702.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|81361574|sp|Q5PLH2|SYK3_SALPA RecName: Full=Uncharacterized protein YjeA
 gi|238690785|sp|B5BKG8|SYK3_SALPK RecName: Full=Uncharacterized protein YjeA
 gi|56130396|gb|AAV79902.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197096542|emb|CAR62151.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 325

 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 10/178 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 15  NLLKRAAIMTEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGMNLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +L+ V + + +   +    F R      I     DK  LR      +++      E R
Sbjct: 134 LLQQVLDCQPAESLSYQQAFQR---HLEIDPLSADKTQLREAAAKLDLSNIADTEEDR 188



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 66/199 (33%), Gaps = 28/199 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
           +++      +HL I    A + +L             D  +           +  E  I 
Sbjct: 146 SLSYQQAFQRHLEIDPLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIG 205

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                +  +I  FP                     Q  +  +   D     A ++++   
Sbjct: 206 KE---KPTFIYHFP-------------------ASQASLAQISTEDHR--VAERFEVYYK 241

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGI 543
           G E+A+G      +    Q F      +       +     L  A   G+P   G+A G+
Sbjct: 242 GIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVALGV 301

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR+VML LGA+++ +V  F
Sbjct: 302 DRLVMLALGAESLADVIAF 320


>gi|156932390|ref|YP_001436306.1| lysyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|156530644|gb|ABU75470.1| hypothetical protein ESA_00166 [Cronobacter sakazakii ATCC BAA-894]
          Length = 355

 Score = 83.6 bits (205), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 10/178 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 45  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGINLYLM 104

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N +++
Sbjct: 105 TSPEYHMKRLLAAGCGPVYQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 163

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +L+ V E + +   +    F R      I     DK  LR      +++      E R
Sbjct: 164 LLQQVLECQPAETISYQQAFQR---HLEIDPLSADKTQLREVAAKLDLSNIADTEEDR 218



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 7/116 (6%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +  F ++ F   Q  +  +   D     A ++++   G E+A+G      +    Q F  
Sbjct: 238 RPVFVYH-FPASQAALAQISTEDHR--VAERFEVYYKGIELANGFHELTDAREQQQRFEQ 294

Query: 511 VGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               +       +     L  A + G+P   G+A G+DR++ML LGA+++ EV  F
Sbjct: 295 DNRKRLQRGLPQQPVDYNLLEALKVGLPDCSGVALGVDRLIMLALGAESLAEVIAF 350


>gi|300087982|ref|YP_003758504.1| class II tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527715|gb|ADJ26183.1| tRNA synthetase class II (D K and N) [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 300

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 80/208 (38%), Gaps = 10/208 (4%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
           R     +++ +R  II ++R   +  +++E  TP+LTA   PE                 
Sbjct: 5   RLTKKGRSLRRRAEIIKAIRDFFLHRDYLEVETPLLTAVPIPE------THIDAIATDRG 58

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+ Y + L+A+G+DR FQI   FR  +  +     EF  L+   +  +  ++   
Sbjct: 59  FLVSSPEIYMKPLLAAGYDRIFQICHSFRKNEIGT-HHLEEFSMLEYYRAGFDYLELAGE 117

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
            E ++  +  +      ++    +I       R    +  ++        +      +  
Sbjct: 118 TEELVLHIAGKLGTSGVLNYQNRQIDLSGPWERLTVREAFIKACDWDPLASPDPERFDLE 177

Query: 313 VFSKI--LSVNPGYEVWAIPAKGGGGNR 338
           + + +  LS +    ++  PA     +R
Sbjct: 178 LATSVAGLSYDKPLVLYDFPADMASLSR 205



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 5/107 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F      +  LK  +     A + +L   G E+A+        E   + F     + +  
Sbjct: 196 FPADMASLSRLKSGNP--AVAERTELFIGGLEVANIFSELTDVEEQRRRFIAELSADKSK 253

Query: 519 E--NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                      A +  +P   G A G+DR+VML   A ++REV+ FP
Sbjct: 254 PQAELPEAFLEALRY-LPESAGGALGVDRLVMLFCDAADIREVNFFP 299


>gi|289807116|ref|ZP_06537745.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 106

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 16/120 (13%)

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
                     Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M
Sbjct: 1   THHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYM 58

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           ++ +  D++   E++ R + ++      V               YG +  D   P+   +
Sbjct: 59  AYADYKDLIELTESLFRTLAQDVLGTTQVP--------------YGDEVFDFGKPLRKTD 104


>gi|124506113|ref|XP_001351654.1| asparagine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23504582|emb|CAD51461.1| asparagine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 722

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 70/462 (15%), Positives = 138/462 (29%), Gaps = 67/462 (14%)

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE-NFIECSTPILTASSPE 175
           ++ + +     Y  L  R          ++ II      +  + N+   +TPILT++  E
Sbjct: 307 KKYHTKQYLRNYPHLRARTKLYSSLFRLKSDIIFETFNFLKKKKNYTYINTPILTSNDCE 366

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
           GA      + +            +Q ++  M  G     +IA   +++    +    E+ 
Sbjct: 367 GAGKLFYATTLFD-----QQIKNEQREEDHMKKGITN--EIAGNIKEKCYYQNEHL-EYI 418

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
                +S +E  D +  ++NV        +N  + +  F    +  A   Y      L  
Sbjct: 419 SRHKSISKMEGFDEM-LLKNVSSNDCISPNNTESYNTRFENDFFKKA--CYLNVSSQLSL 475

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRA-FCDRMNEWARSQGQP 354
             +  ++ + F  +         +     E   +  +    N     D   E+ +     
Sbjct: 476 ECLCCSIGDVFTLNPSFRAENSNTFRHLSEFLMLEVELAFSNLKDIIDISEEYIKEM--- 532

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
            + Y  ++ ++   +       K L       +  +  +   D    I      F     
Sbjct: 533 -ITYALYKSEDVNYLNEYHD--KDLKNKLENILNKKFVLITYDEAINILKKENVF----- 584

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKI---------DFAH-NPFTMPQG 464
                            ++F W  DF F E                    H  PF M   
Sbjct: 585 -----------------YDFQWGKDFSFEEQKYLATNYFKAPVVIINYPTHIKPFYMKLN 627

Query: 465 GMESLKGNDLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
             E               D++    G  +       ++  +  Q  +     K      +
Sbjct: 628 EDEK---------TVSCMDIIFPDVGEVVGGSEREINLKNLKKQMENKKLNMKL-----Y 673

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
               +  + G  PH G   G+DR++M L    N+R+V  FP 
Sbjct: 674 DPYIQLRKHGNIPHAGFGIGMDRLIMFLSSINNIRDVVTFPR 715


>gi|16763166|ref|NP_458783.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|29144645|ref|NP_807987.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|213052294|ref|ZP_03345172.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
 gi|213581491|ref|ZP_03363317.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
 gi|213855778|ref|ZP_03384018.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
 gi|289829994|ref|ZP_06547445.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
 gi|25009410|sp|Q8Z197|SYK3_SALTI RecName: Full=Uncharacterized protein YjeA
 gi|25529111|pir||AC1047 lysine-tRNA ligase (EC 6.1.1.6) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16505474|emb|CAD06824.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29140284|gb|AAO71847.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
          Length = 325

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 74/178 (41%), Gaps = 10/178 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGINLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +L+ V + + +   +    FLR      I     DK  LR      +++      E R
Sbjct: 134 LLQQVLDCQPAESLSYQQAFLR---HLEIDPLSADKTQLREAAAKLDLSNIADTEEDR 188



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 66/199 (33%), Gaps = 28/199 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
           +++      +HL I    A + +L             D  +           +  E  I 
Sbjct: 146 SLSYQQAFLRHLEIDPLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIG 205

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                +  +I  FP                     Q  +  +   D     A ++++   
Sbjct: 206 KE---KPTFIYHFP-------------------ASQASLAQISTEDHR--VAERFEVYYK 241

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGI 543
           G E+A+G      +    Q F      +       +     L  A   G+P   G+A G+
Sbjct: 242 GIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVALGV 301

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR+VML LGA+++ +V  F
Sbjct: 302 DRLVMLALGAESLADVIAF 320


>gi|330721813|gb|EGG99790.1| Lysyl-tRNA synthetase-related protein [gamma proteobacterium
           IMCC2047]
          Length = 103

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 10/98 (10%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS-------NVGISKEVVENRFGGLYR 527
            +  A +++L   G E+A+G      ++  LQ F          G+     + +   L  
Sbjct: 7   GAAVAQRFELYVEGVELANGYYELTDADEQLQRFMADLDERKRRGLVTLPADQK---LLA 63

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           A Q GMP   G+A G+DR++ML+ GA ++R+V  FP  
Sbjct: 64  ALQSGMPDCAGVALGLDRLLMLMAGADSIRDVITFPTD 101


>gi|289763777|ref|ZP_06523155.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis GM 1503]
 gi|289711283|gb|EFD75299.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis GM 1503]
          Length = 308

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 3/103 (2%)

Query: 162 IECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
           +E  TP+L   +    AR F+          Y +  AP+ + +  M  G  + F+    F
Sbjct: 1   MEVETPVLQTLAGGAAARPFVTHFNALDIDRY-MRIAPELFLKRCMVGGSAKVFEFNRVF 59

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           R+E   S   P EF  L+   ++   DD       +++ V +E
Sbjct: 60  RNEGADSTHSP-EFSMLETYQTYGTYDDSAVVTRELIQEVADE 101



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 26/135 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ DFP                P T     +              ++DL   G E+A
Sbjct: 189 APTFVKDFP------------VQTTPLTRQHRSIP---------GVTEKWDLYLRGIELA 227

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G        V  + F++   +    ++           A + GMPP  G   GIDR++M
Sbjct: 228 TGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLM 287

Query: 549 LLLGAKNVREVSLFP 563
            L G  ++RE  LFP
Sbjct: 288 SLTGL-SIRETVLFP 301


>gi|224983651|pdb|3G1Z|A Chain A, Structure Of Idp01693YJEA, A POTENTIAL T-Rna Synthetase
           From Salmonella Typhimurium
 gi|224983652|pdb|3G1Z|B Chain B, Structure Of Idp01693YJEA, A POTENTIAL T-Rna Synthetase
           From Salmonella Typhimurium
          Length = 326

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 10/178 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 16  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGINLYLM 75

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 76  TSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 134

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +L+ V + + +   +    F R      I     DK  LR      +++      E R
Sbjct: 135 LLQQVLDCQPAESLSYQQAFQR---HLEIDPLSADKTQLREAAAKLDLSNIADTEEDR 189



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 66/199 (33%), Gaps = 28/199 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
           +++      +HL I    A + +L             D  +           +  E  I 
Sbjct: 147 SLSYQQAFQRHLEIDPLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIG 206

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                +  +I  FP                     Q  +  +   D     A ++++   
Sbjct: 207 KE---KPTFIYHFP-------------------ASQASLAQISTEDHR--VAERFEVYYK 242

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGI 543
           G E+A+G      +    Q F      +       +     L  A   G+P   G+A G+
Sbjct: 243 GIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVALGV 302

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR+VML LGA+++ +V  F
Sbjct: 303 DRLVMLALGAESLADVIAF 321


>gi|270308173|ref|YP_003330231.1| lysyl-tRNA synthetase, truncated [Dehalococcoides sp. VS]
 gi|270154065|gb|ACZ61903.1| lysyl-tRNA synthetase, truncated [Dehalococcoides sp. VS]
          Length = 309

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 78/210 (37%), Gaps = 13/210 (6%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFY 192
           R   L  N+ +R +I+  +R     + F+E  TP+   S +PE    ++ P     G   
Sbjct: 8   RLKRLKDNLKRRMQILGLIRSFFNEQGFLEVETPVFIPSVAPE---RYIKPIECQNG--- 61

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+ Y + ++ +G+   +QI+ CFR E+ +      EF  L+      +   ++  
Sbjct: 62  YLSTSPELYMKRMLVAGYTTIYQISRCFRAEE-KGRHHNPEFSMLEWYRVGTDYLQMITD 120

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL----RNPIIMHNVTEHFVH 308
            EN+   +  +      VS     I       R             NPIIM +       
Sbjct: 121 TENLFYYIAMKLFGKPVVSYLGHNIDLTPPWERKTVHDAFRDIAGWNPIIMDDEKRFDED 180

Query: 309 SEFRVFSKILSVNPGYEVWAIPAKGGGGNR 338
              ++     S  P   +   PAK     R
Sbjct: 181 IVLKIIPSFPSSRPIV-LMDYPAKMASLAR 209



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 7/108 (6%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +      +  L   +    +  ++    +G E+A+              F+      E  
Sbjct: 200 YPAKMASLARLNKTNPQVAERAEF--FISGLEMANAYSELTDHLEQANRFAEEKWLIESE 257

Query: 519 ENR----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +NR          A +  +P   G A GIDR+VM       +++V  F
Sbjct: 258 QNRRVVSPDKFLEAVKH-LPVCAGNALGIDRLVMFFCNTDQIQDVMPF 304


>gi|301089372|ref|XP_002894992.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262104063|gb|EEY62115.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 283

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 12/118 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                   +  YD++  G E+       H  +++++    
Sbjct: 175 KFPLAVRPFYTMPD--------PTDKRWSNSYDIMIRGEEMVLYAQHVHDPKLLMERMDE 226

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           +G+     +        + +    PHGG   G++R+VML LG  N+ + S+FP     
Sbjct: 227 LGVP----QESMRNYIYSLRLDSLPHGGGGIGLERVVMLYLGLGNISKSSMFPRDPKR 280



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 4/113 (3%)

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM-ASGFDRYFQIAP 218
           +++E  TP L   +     ++      +Q +  A  Q+PQ YK +    +  +R F+I P
Sbjct: 61  DYVEIHTPKLVGGASGSGANYFTLKYFDQDATLA--QSPQTYKHMACDVASLERVFEIGP 118

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTV 270
            FR E   + R   E   LD+EM+       +L   E  L  + +E  + +  
Sbjct: 119 GFRAETSSTQRHMCELVGLDLEMTIKAHYHKVLTEKEKWLGRLIKEKYDTDFY 171


>gi|16767593|ref|NP_463208.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167994774|ref|ZP_02575865.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168244876|ref|ZP_02669808.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168263302|ref|ZP_02685275.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168822526|ref|ZP_02834526.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194447527|ref|YP_002048390.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|197250660|ref|YP_002149261.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197265733|ref|ZP_03165807.1| putative lysyl-tRNA synthetase homolog GenX [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|200388288|ref|ZP_03214900.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|207859493|ref|YP_002246144.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|20141820|sp|Q9ZJ12|SYK3_SALTY RecName: Full=Uncharacterized protein YjeA
 gi|238690032|sp|B5F2M2|SYK3_SALA4 RecName: Full=Uncharacterized protein YjeA
 gi|238690433|sp|B5R019|SYK3_SALEP RecName: Full=Uncharacterized protein YjeA
 gi|238690632|sp|B4TF92|SYK3_SALHS RecName: Full=Uncharacterized protein YjeA
 gi|16422907|gb|AAL23167.1| putative pyruvate oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|194405831|gb|ACF66050.1| putative lysyl-tRNA synthetase homolog GenX [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|197214363|gb|ACH51760.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197243988|gb|EDY26608.1| putative lysyl-tRNA synthetase homolog GenX [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|199605386|gb|EDZ03931.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205327413|gb|EDZ14177.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205336324|gb|EDZ23088.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205341109|gb|EDZ27873.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205347912|gb|EDZ34543.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206711296|emb|CAR35674.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|261249439|emb|CBG27303.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267996677|gb|ACY91562.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301160836|emb|CBW20367.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312915445|dbj|BAJ39419.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|320088774|emb|CBY98532.1| putative lysyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|323132685|gb|ADX20115.1| superoxide dismutase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|332991158|gb|AEF10141.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 325

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 10/178 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGINLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +L+ V + + +   +    F R      I     DK  LR      +++      E R
Sbjct: 134 LLQQVLDCQPAESLSYQQAFQR---HLEIDPLSADKTQLREAAAKLDLSNIADTEEDR 188



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 66/199 (33%), Gaps = 28/199 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
           +++      +HL I    A + +L             D  +           +  E  I 
Sbjct: 146 SLSYQQAFQRHLEIDPLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIG 205

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                +  +I  FP                     Q  +  +   D     A ++++   
Sbjct: 206 KE---KPTFIYHFP-------------------ASQASLAQISTEDHR--VAERFEVYYK 241

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGI 543
           G E+A+G      +    Q F      +       +     L  A   G+P   G+A G+
Sbjct: 242 GIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVALGV 301

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR+VML LGA+++ +V  F
Sbjct: 302 DRLVMLALGAESLADVIAF 320


>gi|198242311|ref|YP_002218231.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|238690364|sp|B5FRL4|SYK3_SALDC RecName: Full=Uncharacterized protein YjeA
 gi|197936827|gb|ACH74160.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|326626035|gb|EGE32380.1| Uncharacterized protein YjeA [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 325

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 10/178 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGINLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +L+ V + + +   +    F R      I     DK  LR      +++      E R
Sbjct: 134 LLQQVLDCQPAESLSYQQAFQR---HLEIDPLSADKTQLREAAAKLDLSNIADTEEDR 188



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 66/199 (33%), Gaps = 28/199 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
           +++      +HL I    A + +L             D  +           +  E  I 
Sbjct: 146 SLSYQQAFQRHLEIDPLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIG 205

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                +  +I  FP                     Q  +  +   D     A ++++   
Sbjct: 206 KE---KPTFIYHFP-------------------ASQASLAQISTEDHR--VAERFEVYYK 241

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGI 543
           G E+A+G      +    Q F      +       +     L  A   G+P   G+A GI
Sbjct: 242 GIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVALGI 301

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR+VML LGA+++ +V  F
Sbjct: 302 DRLVMLALGAESLADVIAF 320


>gi|251788031|ref|YP_003002752.1| lysyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247536652|gb|ACT05273.1| lysyl-tRNA synthetase-related protein GenX [Dickeya zeae Ech1591]
          Length = 325

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 71/179 (39%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++      F   +R        G    L
Sbjct: 14  ANLLKRASIMKEIRRFFSDRGVLEVETPAMSQATVTDVHLFPFQTRFVGPGVADGMALYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +   ++N M+
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQLCRSFRNEESGRYHNP-EFTMLEWYRPHYDMYRLMNEMD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ V E + +   +    F R      +     DK  LR       V +     E R
Sbjct: 133 DLLQQVLECDGAEMLSYQQAFQR---HLEVDPLSADKAQLREAAEKIGVGDVANREEDR 188



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 7/114 (6%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G       +   Q F    
Sbjct: 210 AFVYH-FPATQAALAEISTEDHR--VAERFEVYYKGVELANGFCELTDGKEQRQRFEQDN 266

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             +      V+     L  A   G+PP  G+A G+DR+VML L A+++ EV  F
Sbjct: 267 RKRAARGLPVQPIDENLLAALAAGIPPCSGVAVGVDRLVMLALNAESIGEVMAF 320


>gi|311281287|ref|YP_003943518.1| lysyl-tRNA synthetase-related protein GenX [Enterobacter cloacae
           SCF1]
 gi|308750482|gb|ADO50234.1| lysyl-tRNA synthetase-related protein GenX [Enterobacter cloacae
           SCF1]
          Length = 325

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 75/182 (41%), Gaps = 13/182 (7%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLINEVDD 133

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN---PIIMHNVTEHFVHSEF 311
           +L+ V E + +   +    F R      I     DKP LR     + + NV E     + 
Sbjct: 134 LLQQVLECQPAESLSYQQAFQR---HLEIDPLSADKPQLREAAAKLDLSNVAETEEDRDT 190

Query: 312 RV 313
            +
Sbjct: 191 LL 192



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 7/116 (6%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +  F ++ F   Q  +  +   D     A ++++   G E+A+G      +    Q F  
Sbjct: 208 RPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDAREQQQRFEQ 264

Query: 511 VGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               +       +     L  A Q G+P   G+A G+DR+VML LGA+ + +V  F
Sbjct: 265 DNRKRAARGLVQQPIDVNLLGALQAGLPDCSGVALGVDRLVMLALGAEQLADVIAF 320


>gi|301091450|ref|XP_002895910.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262096098|gb|EEY54150.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 255

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 12/118 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                   +  YD++  G E+       H  +++++    
Sbjct: 147 KFPLAVRPFYTMPD--------PTDKRWSNSYDMMIRGEEMVLCAQHVHDPKLLMERMDE 198

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           +G+     +        + +    PHGG   G++R+VML LG  N+ + S+FP     
Sbjct: 199 LGVP----QESMRNYIYSLRLDSLPHGGGGIGLERVVMLYLGLGNISKSSMFPRDPKR 252



 Score = 38.1 bits (87), Expect = 4.7,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
            +  +R F+I P FR E   + R   +   LD+
Sbjct: 79  VASRERVFEIGPGFRAETSNTHRHMCDLVGLDL 111


>gi|271502186|ref|YP_003335212.1| lysyl-tRNA synthetase-like protein GenX [Dickeya dadantii Ech586]
 gi|270345741|gb|ACZ78506.1| lysyl-tRNA synthetase-related protein GenX [Dickeya dadantii
           Ech586]
          Length = 325

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 70/179 (39%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++      F   +         G    L
Sbjct: 14  ANLLKRASIMKEIRRFFSDRGVLEVETPAMSQATVTDVHLFPFQTHFVGPGAADGMALYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +   ++N M+
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQLCRSFRNEESGRYHNP-EFTMLEWYRPHYDMYRLMNEMD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ V E + +   +    F R      +     DK  LR       V +     E R
Sbjct: 133 DLLQQVLECDSAEMLSYQQAFQR---HLEVDPLSADKAQLREAAEKIGVGDVANREEDR 188



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 7/114 (6%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G      S+   Q F    
Sbjct: 210 AFVYH-FPATQAALAEISTEDHR--VAERFEVYYKGIELANGFCELTDSKEQRQRFEQDN 266

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             +      V+     L  A   G+PP  G+A G+DR+VML L A+++ EV  F
Sbjct: 267 RKRAARGLPVQPIDENLLAALAAGIPPCSGVALGVDRLVMLALNAESIGEVMAF 320


>gi|148361425|gb|ABQ59294.1| putative lysyl-tRNA synthetase [Mycoplasma fermentans]
          Length = 256

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 56/165 (33%), Gaps = 16/165 (9%)

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            L       A         +    + L  A +   + L+  GF+R +++   FR+E   +
Sbjct: 1   FLHDYLSGAAAKPFTTHHNSLNQDFVLRIATEIPLKKLVVGGFERVYEMGRIFRNEGYDT 60

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
              P EF  ++   ++   + ++N  E +++ + ++      V+N               
Sbjct: 61  THNP-EFTTIEFYEAYSNVEGMMNRTETLIKELCKKIGKSKFVTN--------------- 104

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
             + DL  P    N+ +       + F KI          A   K
Sbjct: 105 GVEVDLSKPFKRVNMIDEVSKKTGKNFRKITLEEAIEVAKAYKIK 149


>gi|213647401|ref|ZP_03377454.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
          Length = 232

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 74/178 (41%), Gaps = 10/178 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGINLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +L+ V + + +   +    FLR      I     DK  LR      +++      E R
Sbjct: 134 LLQQVLDCQPAESLSYQQAFLR---HLEIDPLSADKTQLREAAAKLDLSNIADTEEDR 188


>gi|110589240|gb|ABG77129.1| aspartyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 159

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/81 (48%), Positives = 57/81 (70%), Gaps = 2/81 (2%)

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +  CFRDED R+DR P EF QLD+E SF+ +D I++  E ++R +F+E    + + N F 
Sbjct: 1   VVRCFRDEDLRADRQP-EFTQLDIETSFLSEDQIMDLNEEMIRQLFKEVLGTD-LPNPFP 58

Query: 276 RICYDDAIRRYGTDKPDLRNP 296
           R+ YD+A+ RYG+D+PDLR P
Sbjct: 59  RMTYDEAMERYGSDRPDLRVP 79


>gi|95928932|ref|ZP_01311677.1| tRNA synthetase, class II (D, K and N) [Desulfuromonas acetoxidans
           DSM 684]
 gi|95134833|gb|EAT16487.1| tRNA synthetase, class II (D, K and N) [Desulfuromonas acetoxidans
           DSM 684]
          Length = 304

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 81/196 (41%), Gaps = 21/196 (10%)

Query: 145 RTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
           R R++ ++R   +A+ F+E  TP  +  ++PE   D +  S         L  +P+   +
Sbjct: 18  RARMMQTIRAFFVAQEFLEVDTPYRIPCNAPEAHIDPVTSSGQ------VLHTSPELCMK 71

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            L+A+G++R FQ+  C+R E+ R  R  GEF  L+   +  +  D++   E +LR +  +
Sbjct: 72  RLLAAGYERIFQLCHCWRAEE-RGQRHLGEFTMLEWYRAEADYTDLMEDCEGLLRALCPQ 130

Query: 264 ----FSNGNTV-SNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKIL 318
               +   +    + F R+   DA  RY         P+ +    ++    E        
Sbjct: 131 GTLSYQGMSITLQDPFERLTLSDAFDRYA--------PMSLTEAIDNTCFDEIYTQHIEP 182

Query: 319 SVNPGYEVWAIPAKGG 334
           ++      +       
Sbjct: 183 NLGKHQPTFITHYPAD 198



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 46/123 (37%), Gaps = 8/123 (6%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  + +  F  + +      +  L   D     A +++L   G E+A+     +    
Sbjct: 181 EPNLGKHQPTFITH-YPADMAALARLCPEDPD--HAERFELYIAGMELANAFSELNDPAE 237

Query: 504 MLQAFSNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +E +            +  +  +PP  GIA GIDR+ MLL  +  +  V
Sbjct: 238 QRQRFVAEQALREQMGKAPSPLPEPFLQELEH-LPPSAGIALGIDRLAMLLTDSTTIDGV 296

Query: 560 SLF 562
             F
Sbjct: 297 VAF 299


>gi|261342821|ref|ZP_05970679.1| lysyl-tRNA synthetase [Enterobacter cancerogenus ATCC 35316]
 gi|288314863|gb|EFC53801.1| lysyl-tRNA synthetase [Enterobacter cancerogenus ATCC 35316]
          Length = 325

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 79/215 (36%), Gaps = 18/215 (8%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVYQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN---PIIMHNVTEHFVHSEF 311
           +L+ V +   +   +    F R      I     DK  LR+    + + NV E     + 
Sbjct: 134 LLQQVLDCAEAETLSYQQAFQR---HLEIDPLSADKAQLRDAAAKLDLSNVAETEEDRDT 190

Query: 312 RV-----FSKILSVNPGYEVWAIPAKGGGGNRAFC 341
            +     F     +      +         + A  
Sbjct: 191 LLQLLFTFGVEPQIGKDRPTFVYHFPASQASLAQI 225



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E    + +  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 201 EPQIGKDRPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDARE 257

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +       +     L  A + G+P   G+A G+DR+VML LGA+ + +V
Sbjct: 258 QQQRFEQDNRKRNARGLPQQPIDVNLLEALKAGLPDCSGVALGVDRLVMLALGAEQLGDV 317

Query: 560 SLF 562
             F
Sbjct: 318 IAF 320


>gi|45655826|ref|YP_003635.1| lysyl-tRNA synthetase-like protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45602797|gb|AAS72272.1| lysyl-tRNA synthetase homolog [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 338

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 94/245 (38%), Gaps = 13/245 (5%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
             +   + +++R + ++ +R      N++E  TP L    S E   D  +    ++    
Sbjct: 15  MNELSQEVLIQRAKFLSVLRKFFEKRNYLEMDTPCLKPVPSMEPYLDPFLVRSPSKKEKG 74

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+   + +++ G ++ ++I   FR  +  S     EF  L+     +  + +++ 
Sbjct: 75  YLITSPEYSLKEILSKGLEKIYEITHTFRSGEEGSPFHSAEFLMLEFYTVGITLEGLMDF 134

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY---GTDKPDLRNPIIMHNVTEHFVHS 309
             ++L  + +EF +         R+  +++++RY   G  K +L   I  H ++E     
Sbjct: 135 CTDLLEVLDQEFYSYGFNREQVQRMSVEESLKRYAFCGISKSELDRVITEHTLSEIPAEK 194

Query: 310 ---EFRVFSKILSV------NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
              E   F   L++           ++  P +    ++        +    G   L   F
Sbjct: 195 RAYEDSFFIVFLNLVEKHLPKGFTFLYDYPPELAALSKIRSGFAKRFELYFGNLELGNAF 254

Query: 361 WRLDE 365
             L +
Sbjct: 255 EELTD 259



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 456 HNP--FTMPQGGMESLKG-NDLLSIKAFQYDLVCNGFEIASGGIRNHMS-EVMLQAFSNV 511
           H P  FT        L   + + S  A +++L     E+ +         E + +  S  
Sbjct: 212 HLPKGFTFLYDYPPELAALSKIRSGFAKRFELYFGNLELGNAFEELTDPIEQISRFRSER 271

Query: 512 GISKEVVENRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            + K + +  +    GL RA + G+P   GI+ G+DR+++ +LG  ++REVS +
Sbjct: 272 ELRKNLGKEVYAIDSGLERALKEGIPDSCGISIGLDRLLLCILGGSSLREVSPY 325


>gi|70945745|ref|XP_742659.1| asparagine--t RNA ligase [Plasmodium chabaudi chabaudi]
 gi|56521765|emb|CAH79657.1| asparagine--t RNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 631

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 66/188 (35%), Gaps = 25/188 (13%)

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
           +  ++ + +     +  L  R          ++ +I         +N+   +TPILT++ 
Sbjct: 271 MISKKYHTKEYLRNFPHLRGRTKLYSSIFRLKSDLIIETFNYFKKKNYTYINTPILTSND 330

Query: 174 PEGARDFLVPSR-----------------VNQGSFY----ALPQAPQQYKQLLMASGFDR 212
            EG  +    +                  +N+   +           Q     +      
Sbjct: 331 CEGGGELFHVTTSPNKNKKAETGAENVDSINEKKLFFKKPCYLNVSSQLALECLCCSIGD 390

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL----NTMENVLRGVFEEFSNGN 268
            F I   FR E+  + R   EF  L++E++F + + I+    N ++ ++  V  +  +  
Sbjct: 391 VFTINQSFRAENSNTSRHLSEFLMLEIELAFSDLNHIILESENYIKEMINFVLHKSEDIE 450

Query: 269 TVSNNFLR 276
            ++ +  +
Sbjct: 451 YINEHHDQ 458



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           PF M        K ND     +    +  N  EIA G  R     ++ +      ++   
Sbjct: 530 PFYM--------KLNDDKKTVSCMDVIFPNIGEIAGGSERETNLNILKEQMKKNKLNI-- 579

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             + +       + G  PH G   GIDR++M +L   N+R++  FP   N
Sbjct: 580 --DLYNPYLELRKYGNIPHSGFGLGIDRLIMYILSISNIRDIVPFPRYPN 627


>gi|307132775|ref|YP_003884791.1| putative lysyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306530304|gb|ADN00235.1| predicted lysyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 345

 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 71/179 (39%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++      F   +         G    L
Sbjct: 34  ANLLKRASIMKEIRRFFSDRGVLEVETPAMSQATVTDVHLFPFQTHFVGPGAADGMALYL 93

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +   ++N M+
Sbjct: 94  MTSPEYHMKRLLAAGSGPIYQLCRSFRNEESGRYHNP-EFTMLEWYRPHYDMYRLMNEMD 152

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ V E + +   +    F R      +     DK  LR+      V +     E R
Sbjct: 153 DLLQQVLECDSAEMLSYQQAFQR---HLEVDPLSADKAQLRDAAEKIGVGDVAGREEDR 208



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 7/114 (6%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G      S+   Q F    
Sbjct: 230 AFVYH-FPATQAALAEISTEDHR--VAERFEVYYKGIELANGFCELTDSKEQRQRFEQDN 286

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             +      V+     L  A + G+PP  G+A G+DR+VM+ L A+++ EV  F
Sbjct: 287 RKRAARGLPVQPIDENLLAALEAGIPPCSGVALGVDRLVMMALNAESIGEVMAF 340


>gi|205355106|ref|YP_002228907.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|238690493|sp|B5R9A5|SYK3_SALG2 RecName: Full=Uncharacterized protein YjeA
 gi|205274887|emb|CAR39953.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|326630263|gb|EGE36606.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
          Length = 325

 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGINLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 134 LLQQVLD 140



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 65/199 (32%), Gaps = 28/199 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
           +++       HL I    A + +L             D  +           +  E  I 
Sbjct: 146 SLSYQQAFQGHLEIDPLSADKTQLREAVAKLDLSNIADTEEDRDTLLQLLLTMGVEPHIG 205

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                +  +I  FP                     Q  +  +   D     A ++++   
Sbjct: 206 KE---KPTFIYHFP-------------------ASQASLAQISTEDHR--VAERFEVYYK 241

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGI 543
           G E+A+G      +    Q F      +       +     L  A   G+P   G+A G+
Sbjct: 242 GIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVALGV 301

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR+VML LGA+++ +V  F
Sbjct: 302 DRLVMLALGAESLADVIAF 320


>gi|213861682|ref|ZP_03386152.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
          Length = 85

 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)

Query: 178 RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQL 237
             F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +
Sbjct: 5   APFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMM 62

Query: 238 DMEMSFVEQDDILNTMENVLRGV 260
           ++ M++ +  D++   E++ R +
Sbjct: 63  ELYMAYADYKDLIELTESLFRTL 85


>gi|213027828|ref|ZP_03342275.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 179

 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 72/169 (42%), Gaps = 10/169 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGINLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           +L+ V + + +   +    FLR      I     DK  LR      +++
Sbjct: 134 LLQQVLDCQPAESLSYQQAFLR---HLEIDPLSADKTQLREAAAKLDLS 179


>gi|161505152|ref|YP_001572264.1| lysyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|189082341|sp|A9MFQ6|SYK3_SALAR RecName: Full=Uncharacterized protein YjeA
 gi|160866499|gb|ABX23122.1| hypothetical protein SARI_03289 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 325

 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 10/178 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 15  NLLKRAAIMTEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGMNLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRYHNP-EFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +L+ V + + +   +    F R      I     DK  LR      +V+      E R
Sbjct: 134 LLQQVLDCQPAESLSYQQAFQR---HLEIDPLSADKTQLREAAAKLDVSNIADTEEDR 188



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 6/108 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           F   Q  +  +   D     A ++++   G E+A+G      +    Q F      +   
Sbjct: 215 FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAAR 272

Query: 518 ---VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               +     L  A + GMP   G+A G+DR+VML LGA+ + +V  F
Sbjct: 273 GLPQQPIDNHLLDALKAGMPDCSGVALGVDRLVMLALGAERLADVIAF 320


>gi|24217390|ref|NP_714873.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24202472|gb|AAN51888.1|AE011619_5 lysyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 338

 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 94/245 (38%), Gaps = 13/245 (5%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFY 192
             +   + +++R + ++ +R      N++E  TP L    S E   D  +    ++    
Sbjct: 15  MNELSQEVLIQRAKFLSVLRKFFEKRNYLEMDTPCLKPVPSMEPYLDPFLVRSPSKKEKG 74

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+   + +++ G ++ ++I   FR  +  S     EF  L+     +  + +++ 
Sbjct: 75  YLITSPEYSLKEILSKGLEKIYEITHTFRSGEEGSPFHSAEFLMLEFYTVGITLEGLMDF 134

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY---GTDKPDLRNPIIMHNVTEHFVHS 309
             ++L  + +EF +         R+  +++++RY   G  K +L   I  H ++E     
Sbjct: 135 CTDLLEVLDQEFYSYGFNREQVQRMSVEESLKRYAFCGISKSELDRVITEHTLSEIPAEK 194

Query: 310 ---EFRVFSKILSV------NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
              E   F   L++           ++  P +    ++        +    G   L   F
Sbjct: 195 RAYEDSFFIVFLNLVEKHLPKGFTFLYDYPPELAALSKIRSGFAKRFELYFGNLELGNAF 254

Query: 361 WRLDE 365
             L +
Sbjct: 255 EELTD 259



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 456 HNP--FTMPQGGMESLKG-NDLLSIKAFQYDLVCNGFEIASGGIRNHMS-EVMLQAFSNV 511
           H P  FT        L   + + S  A +++L     E+ +         E + +  S  
Sbjct: 212 HLPKGFTFLYDYPPELAALSKIRSGFAKRFELYFGNLELGNAFEELTDPIEQISRFRSER 271

Query: 512 GISKEVVENRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            + K + +  +    GL RA + G+P   GI+ G+DR+++ +LG  ++REVS +
Sbjct: 272 ELRKNLGKEVYAIDSGLERALKEGIPDSCGISIGLDRLLLCILGGSSLREVSPY 325


>gi|197118436|ref|YP_002138863.1| lysine adenylyltransferase [Geobacter bemidjiensis Bem]
 gi|197087796|gb|ACH39067.1| lysine adenylyltransferase [Geobacter bemidjiensis Bem]
          Length = 302

 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 74/189 (39%), Gaps = 18/189 (9%)

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALP 195
              + +V+R  I + +R     + ++E  TP  + A +PE              S + L 
Sbjct: 8   RRRQALVERGAIFSRIREFFQEKGYLEVETPFRIPAPAPEA------QIDAIPASGWFLQ 61

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+   + ++A+G+ R FQI  C+RD +  + R   EF  L+   S  +   ++   E 
Sbjct: 62  TSPELCMKRMLAAGYQRIFQICRCWRDGERGA-RHLSEFTMLEWYRSEADYLVLMEETEA 120

Query: 256 VLRGVF-----EEFSNGNTVSNNFLRICYDDAIRRYG--TDKPDL---RNPIIMHNVTEH 305
           +++                +S  + RI   +A  RY   +  P L       IM  + E 
Sbjct: 121 LVQHAAATGSISYRGQQIELSGKWERITVANAFLRYAGTSMWPALAEGTFDEIMVELIEP 180

Query: 306 FVHSEFRVF 314
            +      F
Sbjct: 181 NLGLARPTF 189



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 9/109 (8%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +      +  LK +D     A +++L   G EIA+              F     ++   
Sbjct: 193 YPASCSALARLKPSDP--TVAERFELYIGGLEIANAFSELIDPVEQRARFVAEA-AERAA 249

Query: 519 ENRFGG-----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           + + G         A    MP   GIA G+DR+VM+LL A+ + EV  F
Sbjct: 250 QGKTGYPMPEKFLSALDE-MPEAAGIALGLDRLVMVLLDAEIIDEVVAF 297


>gi|218264460|ref|ZP_03478293.1| hypothetical protein PRABACTJOHN_03989 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221953|gb|EEC94603.1| hypothetical protein PRABACTJOHN_03989 [Parabacteroides johnsonii
           DSM 18315]
          Length = 114

 Score = 81.7 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 9/117 (7%)

Query: 4   YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV--ANPDSACFEI 61
            RT     L     G+ V + GWV   R    + F+ + D   I  V    + D    E 
Sbjct: 5   KRTKIVDVLKSDAFGTTVNVKGWVRTRRGSKQVSFIALNDGSTINNVQIVVDVDKLGEEF 64

Query: 62  AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
            K + +   + ++G ++    +  N       +E+ A +IEI   A+    P+  + 
Sbjct: 65  LKPITTGASISVNGTLVQSQGKGQN-------VEIQATEIEIYGSADPNTYPLQKKG 114


>gi|238608277|ref|XP_002397191.1| hypothetical protein MPER_02427 [Moniliophthora perniciosa FA553]
 gi|215471158|gb|EEB98121.1| hypothetical protein MPER_02427 [Moniliophthora perniciosa FA553]
          Length = 265

 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 85/214 (39%), Gaps = 12/214 (5%)

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHF 306
            ++  T+E++++ +++E      + + F  + Y +A+ R+G+DKPD R  + + ++TE+ 
Sbjct: 25  MEVRKTVESMVKRIWKEV-EHVELPSEFQVMTYHEAMSRFGSDKPDTRFGLEIIDITENL 83

Query: 307 VHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG--QPGLAYIFWRLD 364
              +   F     +     V              C+R +         +  L++   R  
Sbjct: 84  PAVDRMGFETNKEILECIVVSKSNTPDFVQASRKCER-DPAVEPFNISEKNLSHWLLRSK 142

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAG--DPLKFCSFAADARNHIAQ 422
             G ++  GP +          I  +L +  GD+ +       P    +     R ++ +
Sbjct: 143 TLGRLSR-GP-SNPSEDTAINEINEKLQLSIGDTVWLARRSKTPKGGSTALGRQRLNLFE 200

Query: 423 -ELG---IINCNCFEFCWIMDFPFYEWNEEEKKI 452
             LG   +       F W+ +FP +  ++ +++ 
Sbjct: 201 YALGSGALKQPEDPRFLWVTEFPLFTRSDNDQEF 234


>gi|253690118|ref|YP_003019308.1| lysyl-tRNA synthetase-related protein GenX [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|259511524|sp|C6DFN3|SYK3_PECCP RecName: Full=Uncharacterized protein YjeA
 gi|251756696|gb|ACT14772.1| lysyl-tRNA synthetase-related protein GenX [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 325

 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 72/179 (40%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  II ++R        +E  TP ++ ++      +   +R        G    L
Sbjct: 14  ANLLKRASIIAAIRRFFTDRGVLEVETPAMSQATVTDIFLYPFQTRFVGPGAADGMTMYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIFQLCRSFRNEESG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ V + E +   +    FLR      +     DK  LR       + +     + R
Sbjct: 133 DLLQQVLDCESAEMLSYQQAFLR---HLELDPLSVDKAQLREAAEKLGLGDIACREDDR 188



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 7/114 (6%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G      ++   Q F    
Sbjct: 210 AFVYH-FPATQASLAEISSEDHR--VAERFEVYFKGIELANGFRELTDADEQRQRFEQDN 266

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             +       +     L  A + G+P   G+A G+DR++ML L A+ + +V  F
Sbjct: 267 RKRAARDLPQQPIDENLLAALKHGLPECAGVALGVDRLIMLALNAEKLSDVIAF 320


>gi|50122888|ref|YP_052055.1| lysyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81643796|sp|Q6D033|SYK3_ERWCT RecName: Full=Uncharacterized protein YjeA
 gi|49613414|emb|CAG76865.1| putative lysyl-tRNA synthetase [Pectobacterium atrosepticum
           SCRI1043]
          Length = 325

 Score = 81.7 bits (200), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 72/179 (40%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+ ++R        +E  TP ++ ++      +   +R        G    L
Sbjct: 14  ANLLKRASIVAAVRRFFTDRGVLEVETPAMSQATVTDVFLYPFQTRFVGPGAADGMTLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIFQLCRSFRNEESG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ V + E +   +    FLR      I     DK  LR       + +     + R
Sbjct: 133 DLLQQVLDCESAEMLSYQQAFLR---HLEIDPLSVDKAQLREAAEKLGLGDIACREDDR 188



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N    K  F ++ F   Q  +  +   D     A ++++   G E+A+G      ++ 
Sbjct: 201 EPNIGRDKPAFVYH-FPATQASLAEISSEDHR--VAERFEVYFKGIELANGFRELTDADE 257

Query: 504 MLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +       +     L  A + G+P   G+A G+DR++ML L A+ + +V
Sbjct: 258 QRQRFEQDNRKRAARGLSQQPIDENLLAALKNGLPECSGVALGVDRLIMLALKAEKLSDV 317

Query: 560 SLF 562
             F
Sbjct: 318 IAF 320


>gi|300786628|ref|YP_003766919.1| asparaginyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299796142|gb|ADJ46517.1| asparaginyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 336

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 4/137 (2%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            L        +  + R++ ++R  + A  F E   PI+   +  GAR          G  
Sbjct: 21  HLSSPVTRSVLRIQHRMLTAVREFLSARGFTELLLPIIGPVTDPGARGAKQVDIDFYGHR 80

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRD---EDPRSDRLPGEFYQLDMEMSFVEQDD 248
           Y L  +   YKQ  + + FD+ F IAP  R    E   +DR   EF+Q+D+E++   +D 
Sbjct: 81  YKLMTSAILYKQAALTT-FDKIFCIAPNVRLEPVETASTDRHLVEFHQIDVEVADASRDQ 139

Query: 249 ILNTMENVLRGVFEEFS 265
           I   +E ++R V  + +
Sbjct: 140 ITRLVEELVRTVIRDVT 156



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 6/97 (6%)

Query: 470 KGNDLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           + +     +   +DL+      E+ SG  R H    ++      G +      ++    R
Sbjct: 237 RESPEHPGRLRNFDLIAPEGYGELCSGSEREHDYATIVTRMRETGENP----AKYAWYLR 292

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             + G+PP  G   G++R+   L G  +VRE S FP 
Sbjct: 293 MVRDGIPPSAGFGIGLERLTRYLAGLASVREASAFPK 329


>gi|227326231|ref|ZP_03830255.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 325

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  II ++R        +E  TP ++ ++      +   +R        G    L
Sbjct: 14  ANLLKRASIIAAVRRFFTDRGVLEVETPAMSQATVTDVFLYPFQTRFVGPGAADGMTLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIFQLCRSFRNEESG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ V + E +   +    FLR      I     DK  LR       + +     + R
Sbjct: 133 DLLQQVLDCESAEMLSYQQAFLR---HLEIDPLSVDKAQLREAAEKLGLGDIACREDDR 188



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 7/114 (6%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G      ++   Q F    
Sbjct: 210 AFVYH-FPATQASLAEISSEDHR--VAERFEVYFKGIELANGFRELTDADEQRQRFEQDN 266

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             +       +     L  A + G+P   G+A G+DR++ML L A+ + +V  F
Sbjct: 267 RKRAARDLPQQPIDENLLAALKHGLPECAGVALGVDRLIMLALNAERLSDVIAF 320


>gi|261823167|ref|YP_003261273.1| lysyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261607180|gb|ACX89666.1| lysyl-tRNA synthetase-related protein GenX [Pectobacterium wasabiae
           WPP163]
          Length = 325

 Score = 81.3 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 72/179 (40%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+ ++R        +E  TP ++ ++      +   +R        G    L
Sbjct: 14  ANLLKRASIVAAVRRFFTDRGVLEVETPAMSQATVTDVFLYPFQTRFVGPGAADGMTLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIFQLCRSFRNEESG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ V + E +   +    FLR      I     DK  LR       + +     + R
Sbjct: 133 DLLQQVLDCESAEMLSYQQAFLR---HLEIDPLSVDKAQLREAAEKLGLGDIACREDDR 188



 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N    K  F ++ F   Q  +  +   D     A ++++   G E+A+G      ++ 
Sbjct: 201 EPNIGRDKPAFVYH-FPATQASLAEISSEDHR--VAERFEVYFKGIELANGFRELTDADE 257

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +       +     L  A + G+P   G+A G+DR+VML L A+++ +V
Sbjct: 258 QRQRFEQDNRKRAARGLPQQPIDENLLAALKHGLPECSGVALGVDRLVMLALKAESLSDV 317

Query: 560 SLF 562
             F
Sbjct: 318 IAF 320


>gi|301061193|ref|ZP_07201982.1| lysine--tRNA ligase-like protein GenX [delta proteobacterium
           NaphS2]
 gi|300444735|gb|EFK08711.1| lysine--tRNA ligase-like protein GenX [delta proteobacterium
           NaphS2]
          Length = 317

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 8/122 (6%)

Query: 145 RTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
           R +I+ S+R   I  +++E  TP L TA +PE   + +       G  Y L  +P+   +
Sbjct: 27  RAKIVQSIREFFITRDYLEVETPQLITAPAPEAHIESISV-----GDRY-LQTSPELCMK 80

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            L+  GF R FQI+ CFR E+ R D    EF  L+   + ++  D++   EN+   +  +
Sbjct: 81  RLLTRGFPRIFQISRCFRGEE-RGDLHLPEFSLLEWYRTRIDYRDLMVECENLFLFLARQ 139

Query: 264 FS 265
            +
Sbjct: 140 LN 141



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 13/106 (12%)

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-------GISKE 516
           G +  LK  +     A ++++   G E+A+G    + +      F          G    
Sbjct: 213 GALARLKPGNPS--LAERFEIYVAGIELANGFSELNDAREQRLRFEKELAQRALAGKPTS 270

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +  RF    RA    MP   GIA G+DR+ ML   A+ + EV  F
Sbjct: 271 PMPERFLSDLRA----MPEAAGIALGVDRLAMLFNDARTIDEVVAF 312


>gi|227113808|ref|ZP_03827464.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 325

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  II ++R        +E  TP ++ ++      +   +R        G    L
Sbjct: 14  ANLLKRASIIAAVRRFFTDRGVLEVETPAMSQATVTDIFLYPFQTRFVGPGAADGMTLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIFQLCRSFRNEESG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ V + E +   +    FLR      I     DK  LR       + +     + R
Sbjct: 133 DLLQQVLDCESAEMLSYQQAFLR---HLEIDPLSVDKAQLREAAEKLGLGDIACREDDR 188



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 7/114 (6%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G      ++   Q F    
Sbjct: 210 AFVYH-FPATQASLAEISSEDHR--VAERFEVYFKGVELANGFRELTDADEQRQRFEQDN 266

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             +       +     L  A + G+P   G+A G+DR++ML L A+ + +V  F
Sbjct: 267 RKRAARDLPQQPIDENLLAALKHGLPECAGVALGVDRLIMLALNAERLSDVIAF 320


>gi|281357071|ref|ZP_06243561.1| tRNA synthetase class II (D K and N) [Victivallis vadensis ATCC
           BAA-548]
 gi|281316629|gb|EFB00653.1| tRNA synthetase class II (D K and N) [Victivallis vadensis ATCC
           BAA-548]
          Length = 296

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 8/128 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTP-ILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
            N+ +R+ +  ++R      +FIE  TP  + A +PE   +F+   R  +G F  L  +P
Sbjct: 5   ANLTRRSALFRAIREYFYDRDFIEVETPVKIHAPAPE---EFIESVRA-EGDF--LRTSP 58

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   ++++A GF+R FQI  CFR ++    R   EF  L+     +E  +        + 
Sbjct: 59  ELAMKVMLADGFERIFQIGSCFRADEHG-RRHREEFTMLEFYARGMEYREQAQFTAGFVA 117

Query: 259 GVFEEFSN 266
                   
Sbjct: 118 EAARRVLG 125



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 45/123 (36%), Gaps = 13/123 (10%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E      ++ F  + +   +  +  L+ ++     A +++L   G E+A+       +  
Sbjct: 176 EPELGRGRLTFLTD-YPAGRASLARLRADNP--AVAERWELYIEGIELANAFGELTDAAE 232

Query: 504 MLQAFSN-------VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
               F          G+        F     A   G+P   G A G+DR+ M+   A ++
Sbjct: 233 QKARFRAALEFRAAHGMHPYPAAVEFFA---ALDRGLPQSSGCAMGLDRLAMIFCDADDI 289

Query: 557 REV 559
            +V
Sbjct: 290 GDV 292


>gi|147669430|ref|YP_001214248.1| tRNA synthetase, class II (D, K and N) [Dehalococcoides sp. BAV1]
 gi|146270378|gb|ABQ17370.1| tRNA synthetase, class II (D, K and N) [Dehalococcoides sp. BAV1]
          Length = 309

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 71/203 (34%), Gaps = 9/203 (4%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
           R +I+  +R     + F+E  TP+   S +PE    ++ P     G    L  +P+ Y +
Sbjct: 19  RMQILGLIRSFFNEQGFLEVETPVFVPSVAPE---RYIKPVECQNG---YLSTSPELYMK 72

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            ++ASG+   +QI+ CFRD + +      EF  L+      +   ++N  EN+   +  +
Sbjct: 73  RMLASGYTNIYQISRCFRDGE-KGRHHNPEFSMLEWYRVGADYLQMINDTENLFYHISMK 131

Query: 264 FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN-PIIMHNVTEHFVHSEFRVFSKILSVNP 322
                 +      I       R       L        N  +     E  V   I S   
Sbjct: 132 LFGKPQIRYLGHDIDLTPPWERLTVRDAFLNTVGWDPVNTDDEKRFDEDLVLKVIPSFQS 191

Query: 323 GYEVWAIPAKGGGGNRAFCDRMN 345
                 +       + A   + N
Sbjct: 192 HRPTVLLDYPAKMASLARLKKTN 214



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 31/171 (18%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPF--YEWN----EEEKKID-----------FAHNP-- 458
            ++  ++ +     +E   + D       W+    ++EK+ D            +H P  
Sbjct: 139 RYLGHDIDLTPP--WERLTVRDAFLNTVGWDPVNTDDEKRFDEDLVLKVIPSFQSHRPTV 196

Query: 459 ---FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
              +      +  LK  +    +  ++    +G E+A+              F+      
Sbjct: 197 LLDYPAKMASLARLKKTNPEVAERAEF--FISGLEMANAYSELTNPLEQSARFAEEKKLI 254

Query: 516 EVVENR----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           E  +NR          A +  +P   G A GIDR+VM       +++V  F
Sbjct: 255 EAEQNRRVVTPEIFLEAVKY-LPVCTGNALGIDRLVMFFCNTDQIQDVMPF 304


>gi|289432697|ref|YP_003462570.1| tRNA synthetase class II (D K and N) [Dehalococcoides sp. GT]
 gi|288946417|gb|ADC74114.1| tRNA synthetase class II (D K and N) [Dehalococcoides sp. GT]
          Length = 309

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 73/199 (36%), Gaps = 13/199 (6%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
           R +I+  +R     + F+E  TP+   S +PE    ++ P     G    L  +P+ Y +
Sbjct: 19  RMQILGLIRSFFNEQGFLEVETPVFVPSVAPE---RYIKPVECQNG---YLSTSPELYMK 72

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            ++ASG+   +QI+ CFRD + +      EF  L+      +   ++N  EN+   +  +
Sbjct: 73  RMLASGYTNIYQISRCFRDGE-KGRHHNPEFSMLEWYRVGADYLQMINDTENLFYHISMK 131

Query: 264 FSNGNTVSNNFLRICYDDAIRRYGTDKPDL----RNPIIMHNVTEHFVHSEFRVFSKILS 319
                 +      I       R       L     +P+   +          +V     S
Sbjct: 132 LFGKPQIRYLGQDIDLTPPWERLTVRDAFLNTVGWDPVNTDDEKRFDEDLVLKVIPSFQS 191

Query: 320 VNPGYEVWAIPAKGGGGNR 338
             P   +   PAK     R
Sbjct: 192 HRPTV-LLDYPAKMASLAR 209



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 59/171 (34%), Gaps = 31/171 (18%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPF--YEWN----EEEKKID-----------FAHNP-- 458
            ++ Q++ +     +E   + D       W+    ++EK+ D            +H P  
Sbjct: 139 RYLGQDIDLTPP--WERLTVRDAFLNTVGWDPVNTDDEKRFDEDLVLKVIPSFQSHRPTV 196

Query: 459 ---FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
              +      +  LK  +    +  ++    +G E+A+              F+      
Sbjct: 197 LLDYPAKMASLARLKKTNPEVAERAEF--FISGLEMANAYSELTNPLEQSARFAEEKKLI 254

Query: 516 EVVENR----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           E  +NR          A +  +P   G A GIDR+VM       +++V  F
Sbjct: 255 EAEQNRRVVTPEIFLEAVKY-LPVCTGNALGIDRLVMFFCNTDQIQDVMPF 304


>gi|255656227|ref|ZP_05401636.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-23m63]
          Length = 171

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 52/135 (38%), Gaps = 26/135 (19%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             ++ D+P        K I      F M           D  +++A   DL+  G  EI 
Sbjct: 58  PVFVTDYP--------KDIKA----FYMRMNE-------DGKTVRAM--DLLVPGVGEIV 96

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G  R    +V+L   + +G+     E  +       + G   H G   G +RI+M + G
Sbjct: 97  GGSQREEREDVLLDRINEMGLR----EEDYWWYLELRKFGTATHSGFGLGFERIIMYMTG 152

Query: 553 AKNVREVSLFPMSQN 567
             N+R+V  FP +  
Sbjct: 153 MSNIRDVIPFPRTPK 167


>gi|59712940|ref|YP_205716.1| lysyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|59481041|gb|AAW86828.1| predicted lysyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 328

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 74/180 (41%), Gaps = 9/180 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYAL 194
            + +R  I+ ++R        +E  TP ++ ++           DF+ P   +    Y +
Sbjct: 18  QLQQRADILAAIRSFFFKRKVMEVDTPAMSHATVTDVHLHTFQTDFIGPGYADGTHLYFM 77

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +QI   FR+E+      P EF  L+      +  D+++ M 
Sbjct: 78  -TSPEFHMKRLLAAGSGCIYQINKAFRNEEAGRYHNP-EFTMLEWYRLGFDHHDLMDEMN 135

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
            +L  V + + +   T    F+++     +     +   +  P+ + ++ +     +  +
Sbjct: 136 ELLTLVLKCDNAERMTYQEAFIQVLGVCPLEASMDELRAVAAPLGLSDIADIEEDRDTLL 195


>gi|296100928|ref|YP_003611074.1| lysyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295055387|gb|ADF60125.1| lysyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 325

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVYQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 134 LLQQVLD 140



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 7/116 (6%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +  F ++ F   Q  +  +   D     A ++++   G E+A+G      +    Q F  
Sbjct: 208 RPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDAREQQQRFEQ 264

Query: 511 VGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               +       +     L  A + G+P   G+A G+DR+VML LGA+ + +V  F
Sbjct: 265 DNRKRAARGLPQQPIDTNLLAALKAGLPDCSGVALGVDRLVMLALGAEQLGDVIAF 320


>gi|330862355|emb|CBX72514.1| putative lysyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 223

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 71/179 (39%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++          +R        G    +
Sbjct: 14  ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDIHLVPFQTRFVGPGAADGLTLYM 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   +++ ++
Sbjct: 74  MTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMDEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ + + + S   +    FLR      I     DK  LR      +++      E R
Sbjct: 133 DLLQQILDCDSSERLSYQQAFLR---HLDIDPLSADKAQLREAAAKLDLSNIADTEEDR 188


>gi|295098318|emb|CBK87408.1| lysyl-tRNA synthetase-related protein GenX [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 325

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVYQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 134 LLQQVLD 140



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E    + +  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 201 EPQIGKDRPTFVYH-FPASQASLAQISTEDHR--VAERFEVYFKGIELANGFHELTDARE 257

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +       +     L  A + G+P   G+A G+DR+VML LGA+++ +V
Sbjct: 258 QQQRFEQDNRKRNARGLPQQPIDTHLLEALKAGLPDCSGVALGVDRLVMLALGAEHLGDV 317

Query: 560 SLF 562
             F
Sbjct: 318 IAF 320


>gi|289806182|ref|ZP_06536811.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 74

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/72 (41%), Positives = 44/72 (61%)

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
           P+       E  R KYR+LDLRR  + + +  R +I + +R  M    F++  TP+LT +
Sbjct: 3   PLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 62

Query: 173 SPEGARDFLVPS 184
           +PEGARD+LVPS
Sbjct: 63  TPEGARDYLVPS 74


>gi|118566854|gb|ABL01746.1| unknown [Salmonella enterica subsp. enterica serovar Typhi]
          Length = 136

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 12/125 (9%)

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++
Sbjct: 1   DMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLI 59

Query: 251 NTMENVLRGVFEEFSNGNTVSN---------NFLRICYDDAIRRYGT--DKPDLRNPIIM 299
              E++ R + ++      V            F ++   +AI++Y    D  DL N    
Sbjct: 60  ELTESLFRTLAQDVLGTTQVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDSA 119

Query: 300 HNVTE 304
             + E
Sbjct: 120 KAIAE 124


>gi|10639776|emb|CAC11748.1| asparagine--tRNA ligase related protein [Thermoplasma acidophilum]
          Length = 329

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 21/191 (10%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            L +  L+  +  ++ I +     +    FIE    I++  +         P+    G  
Sbjct: 31  HLEKPELYHALKVQSSIRSITSEFLKERGFIEVPPVIISVLTDPLNHPVFDPTIDYYGYK 90

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR---SDRLPGEFYQLDMEMSFVEQDD 248
           Y+L ++   +K  L+   FDR F  +P  R E+     + R   EF QLD+EM    +D+
Sbjct: 91  YSLTKSMIFHKH-LLTKHFDRIFTFSPNIRLEEEDKVKTGRHLAEFTQLDLEMKGASRDE 149

Query: 249 ILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYGTDKP----- 291
           +++  E+++  +F++              +    S  F RI Y DA ++YG D       
Sbjct: 150 VMSLGEDMIIDLFKKIKRSNEEDLKFFGRDLRIPSKPFKRIAYLDAYKQYGEDFEHILSS 209

Query: 292 DLRNPIIMHNV 302
           +++ P  + ++
Sbjct: 210 EMKEPFWIIDI 220



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 22/132 (16%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           E  WI+D P  +              F   +         D+  I    +     G  ++
Sbjct: 213 EPFWIIDIPLEKRE------------FYDREDPSRPGILVDMDLIYPEGF-----GEALS 255

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G     +S ++ +        K   E +F       + G+ P  G   GI+R+   + G
Sbjct: 256 GGEREYELSRIIDRIHR-----KGQTEEQFKWYIEFAKEGLMPSAGFGIGIERLTRFICG 310

Query: 553 AKNVREVSLFPM 564
            + + +   FP 
Sbjct: 311 LERIEDAHPFPK 322


>gi|16082537|ref|NP_394082.1| asparagine synthetase A [Thermoplasma acidophilum DSM 1728]
          Length = 314

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 21/191 (10%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            L +  L+  +  ++ I +     +    FIE    I++  +         P+    G  
Sbjct: 16  HLEKPELYHALKVQSSIRSITSEFLKERGFIEVPPVIISVLTDPLNHPVFDPTIDYYGYK 75

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR---SDRLPGEFYQLDMEMSFVEQDD 248
           Y+L ++   +K  L+   FDR F  +P  R E+     + R   EF QLD+EM    +D+
Sbjct: 76  YSLTKSMIFHKH-LLTKHFDRIFTFSPNIRLEEEDKVKTGRHLAEFTQLDLEMKGASRDE 134

Query: 249 ILNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYGTDKP----- 291
           +++  E+++  +F++              +    S  F RI Y DA ++YG D       
Sbjct: 135 VMSLGEDMIIDLFKKIKRSNEEDLKFFGRDLRIPSKPFKRIAYLDAYKQYGEDFEHILSS 194

Query: 292 DLRNPIIMHNV 302
           +++ P  + ++
Sbjct: 195 EMKEPFWIIDI 205



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 22/132 (16%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           E  WI+D P  +              F   +         D+  I    +     G  ++
Sbjct: 198 EPFWIIDIPLEKRE------------FYDREDPSRPGILVDMDLIYPEGF-----GEALS 240

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G     +S ++ +        K   E +F       + G+ P  G   GI+R+   + G
Sbjct: 241 GGEREYELSRIIDRIHR-----KGQTEEQFKWYIEFAKEGLMPSAGFGIGIERLTRFICG 295

Query: 553 AKNVREVSLFPM 564
            + + +   FP 
Sbjct: 296 LERIEDAHPFPK 307


>gi|70923584|ref|XP_734779.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56507829|emb|CAH83628.1| hypothetical protein PC300606.00.0 [Plasmodium chabaudi chabaudi]
          Length = 221

 Score = 80.9 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 7/173 (4%)

Query: 39  LDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSA 98
           LD  D     +   N +   ++    + +  ++ +   V     +      + G++ L  
Sbjct: 50  LDQPDANKTNENAHNEELDEYKNTHEISARKIIEVGDFVA---VKGYIRKSLRGELTLHT 106

Query: 99  QKIEILSVAEELPLPVFGEREYPESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMI 157
           + I IL+ A  LPLP   +       +++ R+LD L  +   + I+ R  I   +R  ++
Sbjct: 107 KNIYILTKAL-LPLPDKYKGMKDIEYKYRKRYLDFLTNNEQKEKIITRFNITQEIRRFLL 165

Query: 158 AENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
            + ++E  TP+L        A+ F    +      Y L  AP+ + + L+ SG
Sbjct: 166 KKKYLEVDTPMLQLLPGGALAKPFETYLKSLDLVLY-LRIAPELFLKKLIISG 217


>gi|226362991|ref|YP_002780773.1| aspartyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226241480|dbj|BAH51828.1| aspartyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 241

 Score = 80.9 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 45/115 (39%), Gaps = 14/115 (12%)

Query: 452 IDFAHNPF-TMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                 PF T PQ                  +DL+  G E+ +GG R H       A + 
Sbjct: 134 YPAVKRPFYTHPQPSD---------QRWTNSFDLLFRGLELVTGGQRLHNHADYTAALAA 184

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G         +     A   GMPPHGG A G++R V  LL A N+R  +LFP  
Sbjct: 185 RGEDPAA----YSPYLEAMGHGMPPHGGFAIGLERWVSRLLQADNIRYATLFPRD 235


>gi|148361419|gb|ABQ59291.1| putative lysyl-tRNA synthetase [Mycoplasma caviae]
          Length = 256

 Score = 80.9 bits (198), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 55/165 (33%), Gaps = 16/165 (9%)

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            L       A         +    + L  A +   + L+  GF+R +++   FR+E   +
Sbjct: 1   FLHDYLSGAAAKPFTTHHNSLNQDFVLRIATEIPLKKLVVGGFERVYEMGRIFRNEGYDT 60

Query: 228 DRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
              P EF  ++   ++   + ++N  E +++ + ++      ++N               
Sbjct: 61  THNP-EFTTIEFYEAYSNVEGMMNRTETLIKELCKKIGKSKFITN--------------- 104

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAK 332
             + DL  P    N+ +       + F KI              K
Sbjct: 105 GVEVDLSKPFKRVNMIDAVSKETGKDFRKITLEEAIEVAKVHKIK 149


>gi|332160011|ref|YP_004296588.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325664241|gb|ADZ40885.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 325

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 71/179 (39%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++          +R        G    +
Sbjct: 14  ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDIHLVPFQTRFVGPGAADGLTLYM 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   +++ ++
Sbjct: 74  MTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMDEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ + + + S   +    FLR      I     DK  LR      +++      E R
Sbjct: 133 DLLQQILDCDSSERLSYQQAFLR---HLDIDPLSADKAQLREAAAKLDLSNIADTEEDR 188



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 71/204 (34%), Gaps = 28/204 (13%)

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           D S  ++      +HL+I    A + +L             D  +           +  E
Sbjct: 142 DSSERLSYQQAFLRHLDIDPLSADKAQLREAAAKLDLSNIADTEEDRDTLLQLLFTVGVE 201

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             I      +  ++  FP                     Q  +  +   D     A +++
Sbjct: 202 PHI---GRDKPAFVYHFP-------------------ASQASLAVISTEDHR--VAERFE 237

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGI 539
           +   G E+A+G       +  L+ F     S+E            L  A + G+P   G+
Sbjct: 238 VYFKGIELANGFHELTDGDEQLKRFEQDNRSREKRGLPQHPIDMNLIDALKHGLPDCSGV 297

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
           A G+DR+VML LGA+ + +V  FP
Sbjct: 298 ALGVDRLVMLALGAEKLSDVIAFP 321


>gi|158523174|ref|YP_001531044.1| tRNA synthetase class II (D K and N) [Desulfococcus oleovorans
           Hxd3]
 gi|158512000|gb|ABW68967.1| tRNA synthetase class II (D K and N) [Desulfococcus oleovorans
           Hxd3]
          Length = 301

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 17/160 (10%)

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALP 195
           + H ++  R  +IN++R   +  +++E  TP+ L +  PE   D +          + L 
Sbjct: 2   SFHHHLKTRALVINAVRRFFLDRDYLEVDTPVRLPSLLPEAHIDPVASET------WFLQ 55

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+Q  + L+++G  R FQI   FR  + R  +   EF  L+   +  +  D++   E 
Sbjct: 56  TSPEQCMKRLLSAGHQRIFQICKTFRKAE-RGKKHLPEFSMLEWYRAGADYFDLMAETEA 114

Query: 256 VLRGVFEEFSNGNTVSNN---------FLRICYDDAIRRY 286
           ++R V E+   GN++            +  +    A  RY
Sbjct: 115 LVRFVAEQLGTGNSLFYQGAAIDLSPDWPAMTVAQAFERY 154



 Score = 57.4 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 44/132 (33%), Gaps = 24/132 (18%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI-- 496
           D P + ++        A       Q      K  D   +   +++L   G E+ +G    
Sbjct: 183 DRPVFLYD-----YPAATGAAFARQ------KAADPTVV--ERFELYIGGLELCNGFSEL 229

Query: 497 -----RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                     +      +  G++      +F          MP   G A GIDR+VML  
Sbjct: 230 TGAAAYEERFQQEESRRTGRGLAPLPRPKQFLSDMDR----MPDAAGNALGIDRLVMLFC 285

Query: 552 GAKNVREVSLFP 563
            A  + +V  FP
Sbjct: 286 DATTIDDVVAFP 297


>gi|289810141|ref|ZP_06540770.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 158

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGINLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 134 LLQQVLD 140


>gi|293393226|ref|ZP_06637541.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291424372|gb|EFE97586.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 364

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 57/128 (44%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++      F   +R       +G    +
Sbjct: 53  ANLLKRAAILAEIRRFFADRGVLEVETPAMSQATVTDVHLFPFETRFVGPGAAEGMTLYM 112

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 113 MTSPEYHMKRLLAAGSGPIYQMGRAFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 171

Query: 255 NVLRGVFE 262
           ++L+ V +
Sbjct: 172 DLLQQVLD 179



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 72/207 (34%), Gaps = 28/207 (13%)

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           D +  ++      +HL+I    A + +L             D  +           +  E
Sbjct: 181 DSAETLSYQQAFLRHLDIDPLSAEKAQLREAATKLDLGNIADTEEDRDTLLQLLFTVGVE 240

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             I      +  ++  FP                     Q  +  +   D     A +++
Sbjct: 241 PHIGRE---KPAFVYHFP-------------------ASQAALAEISTEDHR--VAERFE 276

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGI 539
           +   G E+A+G           Q F      +       +     L  A + GMP   G+
Sbjct: 277 VYFKGLELANGFRELTDGNEQRQRFEQDNRKRAARGLPEQPIDHNLLDALRHGMPDCAGV 336

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           A G+DR+VML LGA+++ EV  FP+++
Sbjct: 337 ALGVDRLVMLALGAESLSEVIAFPVTR 363


>gi|123440749|ref|YP_001004741.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166229788|sp|A1JIQ4|SYK3_YERE8 RecName: Full=Uncharacterized protein YjeA
 gi|122087710|emb|CAL10495.1| putative lysyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 325

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 71/179 (39%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++          +R        G    +
Sbjct: 14  ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDIHLVPFQTRFVGPGAADGLTLYM 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   +++ +E
Sbjct: 74  MTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMDEVE 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ + + + S   +    FLR      I     DK  LR      +++      E R
Sbjct: 133 DLLQQILDCDSSERLSYQQAFLR---HLDIDPLSADKAQLREAAAKLDLSNIADTEEDR 188



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 71/204 (34%), Gaps = 28/204 (13%)

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           D S  ++      +HL+I    A + +L             D  +           +  E
Sbjct: 142 DSSERLSYQQAFLRHLDIDPLSADKAQLREAAAKLDLSNIADTEEDRDTLLQLLFTVGVE 201

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             I      +  ++  FP                     Q  +  +   D     A +++
Sbjct: 202 PHI---GRDKPAFVYHFP-------------------ASQASLAVISTEDHR--VAERFE 237

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGI 539
           +   G E+A+G       +  L+ F     S+E            L  A + G+P   G+
Sbjct: 238 VYFKGIELANGFHELTDGDEQLKRFEQDNRSREKRGLPQHPIDMNLIDALKHGLPDCSGV 297

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
           A G+DR+VML LGA+ + +V  FP
Sbjct: 298 ALGVDRLVMLALGAEKLSDVIAFP 321


>gi|300721668|ref|YP_003710943.1| putative lysyl-tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297628160|emb|CBJ88713.1| putative lysyl-tRNA synthetase with Class II aaRS and biotin
           synthetase domains [Xenorhabdus nematophila ATCC 19061]
          Length = 325

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 74/180 (41%), Gaps = 7/180 (3%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR +I+  +R        +E  TP ++ ++          +R        G    L
Sbjct: 14  ANLLKRAKILAEIRRFFADRGVLEVETPAMSQATVTDIHLVPFQTRFVGPGAADGLTLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +QI   FR+E+      P EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGSIYQIGKSFRNEEAGRQHNP-EFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           ++L+ + E E +   +    F+R    D +        ++   + + N+ +     +  +
Sbjct: 133 DLLQQILECESAESLSYQQAFIRYLNIDPLTASKEKLREVAAKLDLSNIADQEEDRDTLL 192



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G      S+     F    
Sbjct: 210 TFVYH-FPASQASLAEISKEDHR--VAERFEVYFKGMELANGFRELTDSDEQCLRFEQDN 266

Query: 513 ISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             +E +    +     L  A   GMP   G+A G+DR++ML LGA  + +V  FP
Sbjct: 267 RKREEMGLPVQPIDDHLLAALAHGMPECAGVALGVDRLIMLALGADRMSDVIAFP 321


>gi|39996852|ref|NP_952803.1| lysyl-tRNA synthetase-related protein [Geobacter sulfurreducens
           PCA]
 gi|39983740|gb|AAR35130.1| lysyl-tRNA synthetase-related protein [Geobacter sulfurreducens
           PCA]
 gi|298505866|gb|ADI84589.1| lysine adenylyltransferase [Geobacter sulfurreducens KN400]
          Length = 307

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 70/160 (43%), Gaps = 17/160 (10%)

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALP 195
                +  R RI+  +R   +   ++E  TP+ + A +PE   D +          + L 
Sbjct: 9   RRRSALWARARILAEIRRFFVEGGYLEVETPLRIPAPAPESHIDPV------PSGPWFLQ 62

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+   + L+A+G++R FQI+ C+RD +  +  LP EF  L+   +  +   ++N  E 
Sbjct: 63  TSPELCMKRLVAAGYERVFQISRCWRDGERGNMHLP-EFTMLEWYRAGTDYRGLMNECEE 121

Query: 256 VLRGVFE-----EFSNGNTVS----NNFLRICYDDAIRRY 286
           ++  V       E  N    +      + R+   +A  RY
Sbjct: 122 LVGAVAAALGMGEVLNVKGRNIRLGAPWERLSVAEAFERY 161



 Score = 50.5 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 9/124 (7%)

Query: 446 NEEEKKIDFAHNPFTMPQGGMES----LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           N+ E ++ FA   F             LK ++    +A +++L   G E+A+        
Sbjct: 181 NDIEPRLGFATPTFICDYPADRGALARLKQDEPS--RAERFELYIAGVELANAFSELTDP 238

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQ---CGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
                 F    + +E        L   F      +PP  GIA GIDR+VMLLL   ++ +
Sbjct: 239 VEQRSRFEQEKLFRESRGKSAIPLPEPFLAELHHLPPTAGIALGIDRMVMLLLDLDSIDD 298

Query: 559 VSLF 562
           V  F
Sbjct: 299 VVAF 302


>gi|212223203|ref|YP_002306439.1| asparagine synthetase A [Thermococcus onnurineus NA1]
 gi|212008160|gb|ACJ15542.1| truncated asparaginyl-tRNA synthetase-related protein [Thermococcus
           onnurineus NA1]
          Length = 300

 Score = 80.1 bits (196), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 17/199 (8%)

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA------SSPEGARDFLVPS 184
           L +    +   I  +TR+I+ M   M+++ F      +L++        P  +     P 
Sbjct: 4   LQIVTRKIEPVIEVQTRVIDYMTRYMVSKGFRWMLPVMLSSITDPLWPDPAASEALKPPE 63

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDMEMS 242
               G    L  +   +KQ+ +A G +R F ++P  R E   +D  R   EF QLD E++
Sbjct: 64  VEVYGERLRLTHSMILHKQMAIAMGINRLFILSPNIRLEGRSADDGRHAYEFTQLDFEIA 123

Query: 243 FVEQDDILNTMENVLRGVFEEFSNG------NTVSNNFLRICYDDAIRRYGTDKP---DL 293
           +   DD+++ +E ++ G+F+E  N         V+  F R   ++    +G++      +
Sbjct: 124 YASMDDVMSLIEELISGLFKEARNWGLEREVPKVAPPFKRFTLEEIKAEFGSEDEASKAM 183

Query: 294 RNPIIMHNVTEHFVHSEFR 312
             P  + ++   F   E  
Sbjct: 184 DEPFWVIDIEREFYDREDP 202



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 8/125 (6%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ-YDLVCN--GFEIASGGIRNHM 500
           E+  E++       PF +     E     D      F+ YDL       E++SGG R   
Sbjct: 172 EFGSEDEASKAMDEPFWVIDIEREFYDREDPERPGHFRNYDLYLPEGYGEVSSGGEREWE 231

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP-PHGGIAAGIDRIVMLLLGAKNVREV 559
            EV+++     GIS     + F       + G+  P  G   GI+R++  L+GA+++ EV
Sbjct: 232 YEVIVRKIKKAGISL----DAFKPYLEVAKAGLLRPSAGAGIGIERLIRYLVGAEHIAEV 287

Query: 560 SLFPM 564
             FP 
Sbjct: 288 QPFPR 292


>gi|242237924|ref|YP_002986105.1| lysyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242129981|gb|ACS84283.1| lysyl-tRNA synthetase-related protein GenX [Dickeya dadantii
           Ech703]
          Length = 325

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP L+ ++      F   +R        G    +
Sbjct: 14  ANLLKRASIMKEIRRFFSDRGMLEVETPALSQATVTDIHLFPFQTRFVGPGAADGIELYM 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQLCRSFRNEESGRFHNP-EFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ V E + +   +    F R     A+     DK  LR+      V +     E R
Sbjct: 133 DLLQQVLECDSAEMLSYQQAFQR---HLAVDPLSADKAQLRDVAEKLGVGDVASQEEDR 188



 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 7/114 (6%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A +++    G E+A+G      S    Q F    
Sbjct: 210 AFVYH-FPATQAALAEISTEDHR--VAERFEAYFKGIELANGFCELTDSHEQRQRFEQDN 266

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             +      V+     L  A   G+PP  G+A G+DR++ML L A+++ +V  F
Sbjct: 267 RKRAARGLPVQPIDEHLLSALSAGIPPCSGVALGVDRLIMLALNAESIGDVIAF 320


>gi|146310009|ref|YP_001175083.1| lysyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166980063|sp|A4W5Q2|SYK3_ENT38 RecName: Full=Uncharacterized protein YjeA
 gi|145316885|gb|ABP59032.1| lysyl-tRNA synthetase-related protein GenX [Enterobacter sp. 638]
          Length = 325

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    + 
Sbjct: 15  NLLKRAAIMTEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLYMM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVYQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 134 LLQQVLD 140



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 7/116 (6%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +  F ++ F   Q  +  +   D     A ++++   G E+A+G      +    Q F  
Sbjct: 208 RPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDAREQQQRFDQ 264

Query: 511 VGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               +       +     L  A + G+P   G+A G+DR+VML LGA+ + +V  F
Sbjct: 265 DNRKRAARGLPQQPIDTNLLEALKAGLPDSSGVALGVDRLVMLALGAEQLADVIAF 320


>gi|329296400|ref|ZP_08253736.1| poxB regulator PoxA [Plautia stali symbiont]
          Length = 325

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++          +R        G    L
Sbjct: 14  ANLLKRAAILAEIRRFFADRGVLEVDTPAMSQATITDIHLVPFQTRFVGPGAADGRDLWL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+  CFR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQMGRCFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE 262
           ++L+ V E
Sbjct: 133 DLLQQVLE 140



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 7/121 (5%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K+ F ++ F   Q  +  +   D     A ++++   G E+A+G      S    Q F  
Sbjct: 208 KLCFVYH-FPASQAALAEISTEDHR--VAERFEVYYKGVELANGFRELTDSREQRQRFEQ 264

Query: 511 VGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
               +             L  A   GMP   G+A G+DR++ML L A  + EV  FP+ +
Sbjct: 265 DNRRRAARGLPQHPIDTYLLDALAHGMPACSGVALGVDRLIMLALKADALSEVIAFPVDR 324

Query: 567 N 567
           +
Sbjct: 325 S 325


>gi|156972498|ref|YP_001443405.1| lysyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166229787|sp|A7MX66|SYK3_VIBHB RecName: Full=Uncharacterized protein YjeA
 gi|156524092|gb|ABU69178.1| hypothetical protein VIBHAR_00130 [Vibrio harveyi ATCC BAA-1116]
          Length = 323

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 62/157 (39%), Gaps = 16/157 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYAL 194
            + +R  +I ++R        +E  TP ++ ++           +F+ P   +    + +
Sbjct: 13  QLRQRAALITAIRQFFAERQVMEVDTPAMSHATVTDIHLHTFQTEFVGPGYADGSKLFFM 72

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +QI   FR+E+        EF  L+      +   +++ M+
Sbjct: 73  -TSPEFHMKRLLAAGSGCIYQINKAFRNEE-NGRHHNPEFTMLEWYRIGFDHHKLMDEMD 130

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           ++L+ V +             R+ Y  A        P
Sbjct: 131 DLLQLVLK--------CGAAERMTYQQAFIDVLGVCP 159



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 76/234 (32%), Gaps = 37/234 (15%)

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
           G  +    D M++         L  +  +   +  +         L +   E     L +
Sbjct: 119 GFDHHKLMDEMDD---------LLQLVLKCGAAERMTYQQAFIDVLGVCPLEGSMQELKV 169

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
                      +P +         + I  E  I         ++ DFP            
Sbjct: 170 VAAKLGLSDIAEPEEDRDTLLQLLSSIGVEAKI---GQQVPAFVYDFP------------ 214

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
                    Q  +  +   D+    A ++++   G E+A+G       +  L  F     
Sbjct: 215 -------ASQAALAKINPQDIR--VADRFEVYFKGIELANGFHELDNPKEQLARFEQDNA 265

Query: 514 SKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  +    +     L  A + G+P   G+A G+DR++ML LG  ++ +V+ FP
Sbjct: 266 KRLDMGLKPQPIDYHLIGALEAGLPDCAGVALGVDRLIMLALGCDHIDQVTAFP 319


>gi|315229828|ref|YP_004070264.1| asparagine--tRNA ligase-like protein [Thermococcus barophilus MP]
 gi|315182856|gb|ADT83041.1| asparagine--tRNA ligase-like protein [Thermococcus barophilus MP]
          Length = 304

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 79/203 (38%), Gaps = 21/203 (10%)

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA------SSPEGARDFLVPS 184
           + L +  +   +  +T+II  M    + + F      +L++        P  +     P 
Sbjct: 4   VQLVKREIAPAMEVQTKIIEYMTRFFVGKGFKWLLPVMLSSITDPLWPDPAASEALKPPE 63

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDMEMS 242
               G    L  +   +KQL +A G D+ F ++P  R E   +D  R   EF QLD E++
Sbjct: 64  IEAYGGKLRLMHSMILHKQLAVAMGIDKLFILSPNIRLEGREADDGRHAYEFTQLDFEIA 123

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVSN----------NFLRICYDDAIRRYGTDK-- 290
           +   DD+++ +E  + G+F+E      +             F R   ++    +G +   
Sbjct: 124 YATMDDVMSLIEEAISGLFKEARKWEILEELGREVPKAKPPFKRFTLEEIKAEFGDEDKA 183

Query: 291 -PDLRNPIIMHNVTEHFVHSEFR 312
              +  P  + ++   F   E  
Sbjct: 184 SEAMDEPFWITDIEREFYDREDP 206



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 8/125 (6%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ-YDLVCNGF--EIASGGIRNHM 500
           E+ +E+K  +    PF +     E     D      F+ YDL       E++SGG R   
Sbjct: 176 EFGDEDKASEAMDEPFWITDIEREFYDREDPERPGHFRNYDLYLPWGYGEVSSGGEREWE 235

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP-PHGGIAAGIDRIVMLLLGAKNVREV 559
            +++++     GIS       F       + G+  P  G   G++R+V  ++GAK++ EV
Sbjct: 236 YDIIVRKMKKAGISL----EAFKPYLEVAKAGLLKPTAGAGIGMERLVRFIVGAKHIAEV 291

Query: 560 SLFPM 564
             FP 
Sbjct: 292 QPFPR 296


>gi|144898376|emb|CAM75240.1| lysyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 348

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 69/184 (37%), Gaps = 25/184 (13%)

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP- 174
            E  +P+S+  +  +L  RR           +++ ++R    A +F E  TP L  S   
Sbjct: 5   KESWHPQSLAERLPYLQCRR-----------QVLRAVRAFFDAGDFTEVETPCLQISPGL 53

Query: 175 EGARDFLVPSRVNQ----GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
           E           +          L  +P+   + L+ +G +R FQIA  FR+ + RSD  
Sbjct: 54  EPHLKAFATRLEDPWGGAAQPLYLHTSPEFAMKKLLVAGMERIFQIAHVFRNGE-RSDTH 112

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSN--------NFLRICYDDA 282
             EF  L+   +      +++ +E ++R         +             + R+    A
Sbjct: 113 SPEFTMLEWYRAGGSIGQMMDDIEALVRACVTAAGGTHLHRADMACDPLVPWQRLSIAQA 172

Query: 283 IRRY 286
             ++
Sbjct: 173 FDQF 176



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 465 GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-VGISKEVVENRF 522
            M +L   D    + A +++    G E+ +       ++   + F   + + +++   R+
Sbjct: 243 SMAALARPDPDDPRVAERFEAYACGVELCNAFGELTDADEQERRFQADMDLKEKLYGERY 302

Query: 523 G---GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
               G   A + GMP   G A G+DR++ML+ GA+ + +V   P+ 
Sbjct: 303 PIDPGFIDALRHGMPQSAGNALGLDRLIMLIAGAQRIDQVLWLPVD 348


>gi|78223046|ref|YP_384793.1| tRNA synthetase, class II (D, K and N) [Geobacter metallireducens
           GS-15]
 gi|78194301|gb|ABB32068.1| tRNA synthetase, class II (D, K and N) [Geobacter metallireducens
           GS-15]
          Length = 307

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 86/232 (37%), Gaps = 36/232 (15%)

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLV 182
            R   R   LR          R RII  +R   I   ++E  TP+ + A +PE   D + 
Sbjct: 5   WRLARRHGALR---------ARARIIQEIRRFFIEGGYLEVETPLRIPACAPESHIDPV- 54

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
                    + L  +P+   + ++A+G++R FQI+ C+R  +     +P EF  L+   +
Sbjct: 55  -----PADGWFLQTSPEICMKRMLAAGYERLFQISHCWRAGERGRMHVP-EFTMLEWYRA 108

Query: 243 FVEQDDILNTMENVLRGVFEEF---------SNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
             +   +++  E ++R V E                ++  + RI   DA  RYG      
Sbjct: 109 GTDYRGVMDETELLIRFVAEGAGFGGPLSFRGKEIDITAVWERITVRDAFVRYG------ 162

Query: 294 RNPIIMHNVTEHFVHSEFRV--FSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
              I M    E  +  E  V      L +     +   P+      R   D 
Sbjct: 163 --GITMDEALERDIFDEMMVEQIEPRLGIGRPTFIHDYPSCRSALARLKKDD 212



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 14/127 (11%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E      +  F H+ +   +  +  LK +D     A +++L   G EIA+          
Sbjct: 184 EPRLGIGRPTFIHD-YPSCRSALARLKKDDP--AVAERFELYLGGVEIANAFSELTDPVE 240

Query: 504 MLQAFSNVGISKEV-------VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
               F +    +         +  +F     A    MP   GIA GIDR+VM+LL A  +
Sbjct: 241 QRARFESENAFRTSRGQTSTPLPEKFLAELTA----MPQAAGIALGIDRLVMVLLDADTI 296

Query: 557 REVSLFP 563
            +V  FP
Sbjct: 297 DDVVAFP 303


>gi|283786838|ref|YP_003366703.1| lysyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282950292|emb|CBG89939.1| putative lysyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 325

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMSLWLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V E
Sbjct: 134 LLQQVLE 140



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 68/202 (33%), Gaps = 28/202 (13%)

Query: 365 ESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQEL 424
            + +++      +HL I    A + +L             D  +           +  E 
Sbjct: 143 AAESLSYQQAFQRHLEIDPLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEP 202

Query: 425 GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
            I      +  ++  FP                     Q  +  +   D     A ++++
Sbjct: 203 HIGKE---KPAFVYHFP-------------------ASQASLAQISTEDHR--VAERFEV 238

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIA 540
              G E+A+G      +    Q F      +       +     L  A + GMP   G+A
Sbjct: 239 YFKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDHNLLEALKVGMPDCSGVA 298

Query: 541 AGIDRIVMLLLGAKNVREVSLF 562
            G+DR+VML LGA+++ EV  F
Sbjct: 299 LGVDRLVMLALGAESLAEVIAF 320


>gi|238784785|ref|ZP_04628787.1| lysyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238714298|gb|EEQ06308.1| lysyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 340

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 55/128 (42%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++          +R        G    +
Sbjct: 29  ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDVHLVPFQTRFVGPGAADGVTLYM 88

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 89  MTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 147

Query: 255 NVLRGVFE 262
           ++L+ + +
Sbjct: 148 DLLQQILD 155



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 7/117 (5%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G       +  LQ F    
Sbjct: 225 AFVYH-FPASQASLAVISTEDHR--VAERFEVYFKGIELANGFHELTDGDEQLQRFEQDN 281

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            S+             L  A + G+P   G+A G+DR+VML L A+ + +V  FP++
Sbjct: 282 RSRAKRGLPQNPIDMNLIAALKHGLPDCSGVALGVDRLVMLALNAERLSDVIAFPVN 338


>gi|269962499|ref|ZP_06176848.1| Lysyl-tRNA synthetase-related protein [Vibrio harveyi 1DA3]
 gi|269832795|gb|EEZ86905.1| Lysyl-tRNA synthetase-related protein [Vibrio harveyi 1DA3]
          Length = 323

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 62/157 (39%), Gaps = 16/157 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYAL 194
            + +R  +I ++R        +E  TP ++ ++           +F+ P   +    + +
Sbjct: 13  QLRQRAALITAIRQFFAERQVMEVDTPAMSHATVTDIHLHTFQTEFVGPGYADGSKLFFM 72

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +QI   FR+E+        EF  L+      +   +++ M+
Sbjct: 73  -TSPEFHMKRLLAAGSGCIYQINKAFRNEE-NGRHHNPEFTMLEWYRIGFDHHKLMDEMD 130

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           ++L+ V +             R+ Y  A        P
Sbjct: 131 DLLQLVLK--------CGAAERMTYQQAFIDVLGVCP 159



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 73/234 (31%), Gaps = 37/234 (15%)

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
           G  +    D M++         L  +  +   +  +         L +   E     L  
Sbjct: 119 GFDHHKLMDEMDD---------LLQLVLKCGAAERMTYQQAFIDVLGVCPLEGSMQELKA 169

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
                      +P +           I  E  I         ++ DFP            
Sbjct: 170 VAAKLGLSDIAEPEEDRDTLLQLLFSIGVEAKI---GQQVPAFVYDFP------------ 214

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
                    Q  +  +   D     A ++++   G E+A+G       +  L  F     
Sbjct: 215 -------ASQAALAKINPQDNR--VADRFEVYFKGIELANGFHELDNPKEQLARFEQDNA 265

Query: 514 SKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  +    +     L  A + G+P   G+A G+DR++ML LG  ++ +V+ FP
Sbjct: 266 KRLEMGLKPQPIDYHLIGALEAGLPDCAGVALGVDRLIMLALGCDHIDQVTAFP 319


>gi|149173839|ref|ZP_01852468.1| lysyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148847369|gb|EDL61703.1| lysyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 347

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 16/157 (10%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGAR--DFLVP------SRVNQGSFYALPQ 196
           R++++ ++R    +  + E  TP+L+  +   A    FL        +  N G    L  
Sbjct: 20  RSQLLRAIRTFFESRGYWEVETPLLSRDTVVDAYIDPFLTHWHAAEGTTDNPGEPRYLQT 79

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+   + L+A+G D+ +QI   FR  + R +R   EF  L+         D +  +E +
Sbjct: 80  SPEFAMKRLLAAGADQIYQITHAFRQAE-RGERHNPEFAMLEWYRRGETHHDQMTFVEAL 138

Query: 257 LRGVFEE---FSNGNTVSN----NFLRICYDDAIRRY 286
           +R V+ E    ++ N  S      F R  Y+DA  ++
Sbjct: 139 VRDVYAEAATVTDSNRHSELPDQPFTRYAYEDAFLQF 175



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 67/166 (40%), Gaps = 7/166 (4%)

Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTM 461
           +     +F   A      +  +    +C  ++   +++    E    EK   F ++ +  
Sbjct: 181 LNATAEEFRQTAEQHSISVPADFDTTDCLSWQNLLLVE--LIEPALGEKGAVFIYD-YPA 237

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS-EVMLQAFSNVGISKEVVEN 520
            Q  +  ++  D  +  A +++L   G EI +G      + E+  +      I K     
Sbjct: 238 SQAALARIRQEDGSAGVAERFELYLQGVEICNGYHELTDAAELRTRIRQQSDIRKREKRP 297

Query: 521 RF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                  L +A + G+P   G A G+DR+ ML LG + ++EV  FP
Sbjct: 298 ALPAESYLLQAMEAGLPACAGTALGLDRLFMLALGKQTLQEVIAFP 343


>gi|153834942|ref|ZP_01987609.1| putative lysyl-tRNA synthetase homolog GenX [Vibrio harveyi HY01]
 gi|148868622|gb|EDL67708.1| putative lysyl-tRNA synthetase homolog GenX [Vibrio harveyi HY01]
          Length = 323

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 62/157 (39%), Gaps = 16/157 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYAL 194
            + +R  +I ++R        +E  TP ++ ++           +F+ P   +    + +
Sbjct: 13  QLRQRAALITAIRQFFAERQVMEVDTPAMSHATVTDIHLHTFQTEFVGPGYADGSKLFFM 72

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +QI   FR+E+        EF  L+      +   +++ M+
Sbjct: 73  -TSPEFHMKRLLAAGSGCIYQINKAFRNEE-NGRHHNPEFTMLEWYRIGFDHHKLMDEMD 130

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           ++L+ V +             R+ Y  A        P
Sbjct: 131 DLLQLVLK--------CGAAERMTYQQAFIDVLGVCP 159



 Score = 67.8 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 74/234 (31%), Gaps = 37/234 (15%)

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
           G  +    D M++         L  +  +   +  +         L +   E     L +
Sbjct: 119 GFDHHKLMDEMDD---------LLQLVLKCGAAERMTYQQAFIDVLGVCPLEGSMQELKV 169

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
                      +P +           I  E  I         ++ DFP            
Sbjct: 170 VAAKLGLSDIAEPEEDRDTLLQLLFSIGVEAKI---GQQVPAFVYDFP------------ 214

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
                    Q  +  +   D     A ++++   G E+A+G       +  L  F     
Sbjct: 215 -------ASQAALAKINLQDNR--VADRFEVYFKGIELANGFHELDNPKEQLARFEQDNA 265

Query: 514 SKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  +    +     L  A + G+P   G+A G+DR++ML LG  ++ +V+ FP
Sbjct: 266 KRLEMGLKPQPIDYHLIGALEAGLPDCAGVALGVDRLIMLALGCDHIDQVTAFP 319


>gi|238750058|ref|ZP_04611561.1| lysyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238711602|gb|EEQ03817.1| lysyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 332

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 70/179 (39%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++          +R        G    +
Sbjct: 21  ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDIHLVPFQTRFVGPGAADGLTLYM 80

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 81  MTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 139

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ + +   +   +    FLR      I     DK  LR      +++      E R
Sbjct: 140 DLLQQILDCNSAETLSYQQAFLR---HLDIDPLSADKAQLREAAAKLDLSNIAETEEDR 195



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 7/117 (5%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G       +  LQ F    
Sbjct: 217 AFVYH-FPASQASLAVISSEDHR--VAERFEVYFKGLELANGFHELTDGDEQLQRFEQDN 273

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             +             L  A + G+P   G+A G+DR+VML LGA+ + EV  FP++
Sbjct: 274 RVRAKRGLPQNPIDMNLIAALKQGLPDCSGVALGVDRLVMLALGAERLSEVIAFPVN 330


>gi|209527075|ref|ZP_03275590.1| tRNA synthetase class II (D K and N) [Arthrospira maxima CS-328]
 gi|209492503|gb|EDZ92843.1| tRNA synthetase class II (D K and N) [Arthrospira maxima CS-328]
          Length = 207

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 77/234 (32%), Gaps = 36/234 (15%)

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           RAF   + +    Q    L +   R+D S        +  +              ++  D
Sbjct: 8   RAFLKHIFKSVLEQCPEDLEFFNQRIDNSVLATADNII--NNEFERITYTEAIALLEKSD 65

Query: 398 SCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN 457
             F             ++   ++A+EL        +   + D+P                
Sbjct: 66  RTFEYPVSWG--LDLQSEHERYLAEELFK------KPVIVTDYP------------REIK 105

Query: 458 PFTMPQGGME-SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
            F M Q   E +++  D+L+ K           EI  G  R    +++ +    + I+ +
Sbjct: 106 AFYMRQNDDEKTVRAMDVLAPKVG---------EIIGGSQREERLDILQKRMEALQINPD 156

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            +           + G  PH G   G +R+V  + G  N+R+V  FP +    D
Sbjct: 157 ELW----WYLDLRRYGTVPHAGFGLGFERVVQFMTGMANIRDVIPFPRAPQTID 206


>gi|162451080|ref|YP_001613447.1| lysine--tRNA ligase [Sorangium cellulosum 'So ce 56']
 gi|161161662|emb|CAN92967.1| Lysine--tRNA ligase [Sorangium cellulosum 'So ce 56']
          Length = 439

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 66/202 (32%), Gaps = 32/202 (15%)

Query: 156 MIAENFIECSTPILTAS----------SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
                F+E  TP +  S          + + AR               L  +P+   + L
Sbjct: 150 FAERGFLEVETPSMVPSPGLDLHLDAFAVQAARPTF------------LITSPEYQMKRL 197

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF- 264
           ++ G  R FQ+A CFR  +   DR   EF  L+   +F   D+++   E ++R V     
Sbjct: 198 LSGGVPRCFQLARCFRRGELG-DRHNPEFTMLEWYRAFAGVDEVMADTEAIVRRVAGALG 256

Query: 265 --------SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
                        +   F RI   +A  R+     D    +   +    F      V   
Sbjct: 257 AEGTISTSGKQVRLERPFPRISIGEAFARWAGVPADDAIALASSDEERFFRLLVDAVEPA 316

Query: 317 ILSVNPGYEVWAIPAKGGGGNR 338
           I ++     +   PA      R
Sbjct: 317 IAALPHPVFLVDFPAPFASLAR 338



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 17/130 (13%)

Query: 446 NEEEKKIDFAHNP-----FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM 500
           +  E  I    +P     F  P   +  LK +D       +++L   G E+ +G      
Sbjct: 311 DAVEPAIAALPHPVFLVDFPAPFASLARLKPSDPRVC--ERFELYVAGVELCNGFGELTD 368

Query: 501 SEVM-------LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
                        A +  G     ++ RF     A + GMPP  G A G+DR+V L LGA
Sbjct: 369 PVEQRARLLADQAARAAQGKPVYPIDERF---LDALEEGMPPAAGNALGVDRLVALCLGA 425

Query: 554 KNVREVSLFP 563
            ++ +V  FP
Sbjct: 426 PSIGDVLAFP 435


>gi|302851344|ref|XP_002957196.1| hypothetical protein VOLCADRAFT_77490 [Volvox carteri f.
           nagariensis]
 gi|300257446|gb|EFJ41694.1| hypothetical protein VOLCADRAFT_77490 [Volvox carteri f.
           nagariensis]
          Length = 483

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 53/149 (35%), Gaps = 3/149 (2%)

Query: 60  EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQ-IELSAQKIEILSVAEELPLPVFGER 118
           ++ + V     L   G  +            T Q +EL A KI  +   +    P+  ++
Sbjct: 5   DVGEEVGGLKTLTATGTSVLVEGRLEATPEGTKQAVELKATKILHVGPCDAATYPIAKKK 64

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR 178
              E +R K   L  R +T+      R  +  +         F+   TPI+TAS  EGA 
Sbjct: 65  TSYEFLREKM-HLRPRANTIGAVARIRNALAFATHRFFQENGFLYVHTPIITASDCEGAG 123

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMA 207
           +    + +  G        P    + L A
Sbjct: 124 EMFQVTTLL-GKMKEYADVPTVSLEQLEA 151



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    E+  G  R    +V+ +     G+     E    G     + G  PH G   G 
Sbjct: 400 LVPKVGELIGGSQREDRLDVLEKRIEEGGMDIAAYE----GYLDLRRYGTVPHSGFGLGF 455

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R+++   G  N+REV  FP 
Sbjct: 456 ERLILFATGLDNIREVIPFPR 476



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 9/187 (4%)

Query: 187 NQGSFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
            +  F+   A      Q +    A      +   P FR E   + R   EF+ ++ EM+F
Sbjct: 210 YKDDFFSKPAYLTVSGQLQGEFYACALSNIYTFGPTFRAEYSFTARHLAEFWMIEPEMAF 269

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFL-RICYDDAIRRYGTDKPDLRNPIIMHNV 302
            +  D +   E+ +R   +   +       F+ ++  + AI R          P    + 
Sbjct: 270 CDLKDDMQCAEDYVRYCCKYLLDNCQTDLEFINKMVDNTAIARLQQVAH---TPFKRVSY 326

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ-PGLAYIFW 361
           TE        V ++ +        W I  +         +   +          +   + 
Sbjct: 327 TEAI-DLLKDVVARGVKKFEYNVEWGIDLQTEHERYLTEEIFKQPVIVYNYPKEIKAFYM 385

Query: 362 RLDESGN 368
           RL+E G 
Sbjct: 386 RLNEDGK 392


>gi|183598051|ref|ZP_02959544.1| hypothetical protein PROSTU_01407 [Providencia stuartii ATCC 25827]
 gi|188022830|gb|EDU60870.1| hypothetical protein PROSTU_01407 [Providencia stuartii ATCC 25827]
          Length = 325

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 77/180 (42%), Gaps = 7/180 (3%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N+++R +II  +R        +E  TP ++ ++          +R       QG    L
Sbjct: 14  ANLLQRAKIIAEIRRFFTERCVLEVETPAMSQATITDIHLVPFNTRFVGPGAAQGIDLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQLCRSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLINEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           ++L+ V + E +   +    FLR    D +    ++  ++   + + NV EH    +  +
Sbjct: 133 DLLQQVLDCESAELLSYQQAFLRHLDIDPLSAEKSELKEVAARLDLSNVAEHEEDKDTLL 192



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 8/121 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           EK +   H P T  Q  +  +   D     A ++++   G E+A+G      ++   Q F
Sbjct: 207 EKPVVVYHFPAT--QASLAEISTEDHR--VAERFEVYFKGMELANGFRELTDAKEQRQRF 262

Query: 509 SNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +      V      L  A   G+P   G+A G+DR++M+ L A+ + +V  FP+
Sbjct: 263 EQDNRRRAALGLPVHPIDEHLLAALTHGLPECSGVALGVDRLIMIALKAEKISDVIAFPV 322

Query: 565 S 565
           +
Sbjct: 323 T 323


>gi|213421565|ref|ZP_03354631.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 138

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 6/125 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGINLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGV 260
           +L+ V
Sbjct: 134 LLQQV 138


>gi|123436445|ref|XP_001309183.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121890898|gb|EAX96253.1| hypothetical protein TVAG_205400 [Trichomonas vaginalis G3]
          Length = 253

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 4/94 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMPP 535
            ++++  NG E A+     +   V  + F +   +K   ++           A +  +PP
Sbjct: 143 ERFEVFINGLEYANAYTELNCPMVQRELFLDQLKAKAAKDDEAMPYDDTFCTALEYALPP 202

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             G   G+DR+VMLL    ++REV LFP+ +   
Sbjct: 203 TAGWGCGVDRLVMLLTNQVSIREVLLFPLMKPAA 236


>gi|301090301|ref|XP_002895371.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262099042|gb|EEY57094.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 181

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 12/117 (10%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
           +     PF                   +   D++  G E+ SG  R H+ ++ ++    +
Sbjct: 74  LPAGVRPFYTMPD--------PTDKRWSHSNDMMIRGEEMVSGAQRVHIPKLQMERMDIL 125

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           G+    ++        +F+ G  PHGG   G++R+VML LG  N+ + S+F      
Sbjct: 126 GV----LQESMRNYIYSFRLGALPHGGGGIGLERVVMLYLGLGNISKSSMFSRDPKR 178


>gi|238793397|ref|ZP_04637023.1| lysyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238727366|gb|EEQ18894.1| lysyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 340

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 55/128 (42%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++          +R        G    +
Sbjct: 29  ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDVHLVPFQTRFVGPGAADGLTLYM 88

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 89  MTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 147

Query: 255 NVLRGVFE 262
           ++L+ + +
Sbjct: 148 DLLQQILD 155



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G       +  LQ F    
Sbjct: 225 AFVYH-FPASQASLAEISTEDHR--VAERFEVYFKGIELANGFHELTDGDEQLQRFEQDN 281

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             +             L  A + G+P   G+A G+DR+VML LGA+ + +V  FP
Sbjct: 282 RIRAKRGLPQNPIDMNLIAALKQGLPDCSGVALGVDRLVMLALGAERLDDVIAFP 336


>gi|310765345|gb|ADP10295.1| lysyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 325

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++      F   +R        G    L
Sbjct: 14  ANLLKRAAIMAEIRRFFADRGVLEVETPAMSQATVTDVHLFPFQTRFVGPGAAAGVDLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE 262
           ++L+ V E
Sbjct: 133 DLLQQVLE 140



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E    ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      S  
Sbjct: 201 EPEIGKEKPAFVYH-FPATQAALAEISPEDHR--VAERFEVYFKGIELANGFRELTDSRE 257

Query: 504 MLQAFSNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +       +     L  A   GMP   G+A G+DR+VML L A+ + +V
Sbjct: 258 QRQRFEQDNRKRAAAGLPQQPIDNYLLEALAGGMPDSSGVALGVDRLVMLALKAERLSDV 317

Query: 560 SLF 562
             F
Sbjct: 318 IAF 320


>gi|88812698|ref|ZP_01127945.1| Lysyl-tRNA synthetase-related protein [Nitrococcus mobilis Nb-231]
 gi|88790114|gb|EAR21234.1| Lysyl-tRNA synthetase-related protein [Nitrococcus mobilis Nb-231]
          Length = 323

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
            ++ F ++ F   Q  +  L+ +D     A +++L  NG E+A+G      +      F 
Sbjct: 205 GRLTFVYD-FPASQAALARLRPDDPR--VAERFELFSNGVELANGYHELTDAVEQRLRFE 261

Query: 510 NVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               ++      + +    L  A + G+PP  G+A G+DR++M + GA+++ EV  FP
Sbjct: 262 RERAARARLGLPLPDVDARLLAAMEAGLPPCAGVALGLDRLIMHVCGARHIDEVIAFP 319



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 53/140 (37%), Gaps = 12/140 (8%)

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF----LVPSR 185
             D R     K + +R  I+ ++R        +E  TP L      GA D        + 
Sbjct: 2   HDDWRPSACRKALRQRASILAAIRGFFAERGVLEVDTPCLV---GAGATDPNVPSFYVAY 58

Query: 186 VNQGSF----YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
              G+       L  +P+   + L+A+G    +QI   FR  +      P EF  L+   
Sbjct: 59  DGPGAPPEGRLWLQSSPEHAMKRLLAAGSGAIYQITHAFRAGERGRLHNP-EFTLLEWYR 117

Query: 242 SFVEQDDILNTMENVLRGVF 261
              +Q  +++ + ++ R + 
Sbjct: 118 LGWDQHALMDEVADLFRYLL 137


>gi|259907165|ref|YP_002647521.1| lysyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224962787|emb|CAX54242.1| Putative lysyl-tRNA synthetase (Lysine-tRNA ligase) [Erwinia
           pyrifoliae Ep1/96]
 gi|283476972|emb|CAY72856.1| putative lysyl-tRNA synthetase [Erwinia pyrifoliae DSM 12163]
          Length = 325

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++      F   +R        G    L
Sbjct: 14  ANLLKRAAIMAEIRRFFADRGVLEVETPAMSQATVTDVHLFPFQTRFVGPGAAAGVDLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE 262
           ++L+ V E
Sbjct: 133 DLLQQVLE 140



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E    ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      S  
Sbjct: 201 EPEIGKEKPAFVYH-FPATQAALAEISPEDHR--VAERFEVYFKGIELANGFHELTDSRE 257

Query: 504 MLQAFSNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +       +     L  A   GMP   G+A G+DR+VML L A+ + +V
Sbjct: 258 QRQRFEQDNRKRAAAGLPQQPIDNYLLEALAGGMPDSSGVALGVDRLVMLALKAERLSDV 317

Query: 560 SLF 562
             F
Sbjct: 318 IAF 320


>gi|3947886|gb|AAC82540.1| pyruvate oxidase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 325

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 72/178 (40%), Gaps = 10/178 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFGDRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGINLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLEAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +L+ V + + +   +    F R      I     DK  LR      +++      E R
Sbjct: 134 LLQQVLDCQPAESLSYQQAFQR---HLGIDPLSADKTQLREAAAKLDLSNIADTEEDR 188



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 66/199 (33%), Gaps = 28/199 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
           +++      +HL I    A + +L             D  +           +  E  I 
Sbjct: 146 SLSYQQAFQRHLGIDPLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIG 205

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                +  +I  FP                     Q  +  +   D     A ++++   
Sbjct: 206 KE---KPTFIYHFP-------------------ASQASLAQISTEDHR--VAERFEVYYK 241

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGI 543
           G E+A+G      +    Q F      +       +     L  A   G+P   G+A G+
Sbjct: 242 GIELANGFHELTDAREQQQRFEQDNRKRAARGLAQQPMDQNLLDALAAGLPDCSGVALGV 301

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR+VML LGA+++ +V  F
Sbjct: 302 DRLVMLALGAESLADVIAF 320


>gi|268590816|ref|ZP_06125037.1| lysyl-tRNA synthetase GenX [Providencia rettgeri DSM 1131]
 gi|291313596|gb|EFE54049.1| lysyl-tRNA synthetase GenX [Providencia rettgeri DSM 1131]
          Length = 325

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 76/180 (42%), Gaps = 7/180 (3%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N+++R +II  +R        +E  TP ++ ++          +R       QG    L
Sbjct: 14  ANLLQRAKIIAEVRRFFTDRCVLEVETPAMSQATVTDIHLVPFETRFVGPGAAQGINLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQLGRSFRNEEAG-RHHNPEFTMLEWYRPHFDMYRLINEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           ++L+ V E E +   +    FLR    D +    ++  ++   + + N+ +     +  +
Sbjct: 133 DLLQQVLECESAELLSYQQAFLRYLDIDPLSAEKSELREVAARLDLSNIADQEEDKDTLL 192



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 8/121 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           EK     H P T     + S + +      A ++++   G E+A+G      +    Q F
Sbjct: 207 EKPAVVYHFPATQASLAVISTEDH----RVAERFEVYYKGMELANGFHELTDASEQRQRF 262

Query: 509 SNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +  +          L  A + G+P   G+A G+DR++M+ L A  + +V  FP+
Sbjct: 263 EQDNRKRAAMGLPTAPIDEHLLAALEHGLPDCSGVAVGVDRLIMIALNADKISDVIAFPV 322

Query: 565 S 565
           +
Sbjct: 323 T 323


>gi|238796044|ref|ZP_04639555.1| lysyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238719989|gb|EEQ11794.1| lysyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 340

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 55/128 (42%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++          +R        G    +
Sbjct: 29  ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDIHLVPFETRFVGPGAADGLTLYM 88

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 89  MTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 147

Query: 255 NVLRGVFE 262
           ++L+ + +
Sbjct: 148 DLLQQILD 155



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 7/117 (5%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G       +  LQ F    
Sbjct: 225 AFVYH-FPASQASLAVISTEDHR--VAERFEVYFKGIELANGFHELTDGDEQLQRFEQDN 281

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            S+             L  A + G+P   G+A G+DR+VML L A+ + +V  FP+ 
Sbjct: 282 RSRAKRGLPQHPIDMNLIAALKHGLPDCSGVALGVDRLVMLALNAERLSDVIAFPVD 338


>gi|163802726|ref|ZP_02196616.1| lysyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173433|gb|EDP58255.1| lysyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 323

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 64/157 (40%), Gaps = 16/157 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYAL 194
            + +R  +I+++R        +E  TP ++ ++           +F+ P   +    + +
Sbjct: 13  QLRQRAALISAIRQFFTERQVMEVDTPAMSHATVTDVHLHTFQTEFVGPGYADGSKLFFM 72

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +QI   FR+E+      P EF  L+      +   +++ M+
Sbjct: 73  -TSPEFHMKRLLAAGSGCIYQINKAFRNEENGRYHNP-EFTMLEWYRVGFDHHQLMDEMD 130

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           ++L+ + +             R+ Y  A        P
Sbjct: 131 DLLQLILK--------CGAAERMTYQQAFIDVLGVCP 159



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 75/234 (32%), Gaps = 37/234 (15%)

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
           G  +    D M++         L  +  +   +  +         L +   E     L  
Sbjct: 119 GFDHHQLMDEMDD---------LLQLILKCGAAERMTYQQAFIDVLGVCPLEGSMRELKA 169

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
                      +P +           I  E  I         +I DFP            
Sbjct: 170 VAAKLGLSDIAEPEEDRDTMLQLLFSIGVEAKI---GQHVPAFIFDFP------------ 214

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
                    Q  +  +   D     A ++++   G E+A+G       +  L  F     
Sbjct: 215 -------ASQAALAKINPQDNR--VADRFEVYFKGIELANGFHELDNPKEQLARFEQDNA 265

Query: 514 SKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  V    +   G L  A + G+P   G+A G+DR++ML LG +++ +V+ FP
Sbjct: 266 KRLEVGLQPQPIDGHLIGALEAGLPDCAGVALGVDRLIMLALGCEHIDQVTAFP 319


>gi|318607432|emb|CBY28930.1| lysyl-tRNA synthetase-related protein [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 325

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 70/179 (39%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++          +R        G    +
Sbjct: 14  ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDIHLVPFQTRFVGPGAADGLTLYM 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A G    +Q+   FR+E+        EF  L+      +   +++ ++
Sbjct: 74  MTSPEYHMKRLLAVGSGSIYQLGRSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMDEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ + + + S   +    FLR      I     DK  LR      +++      E R
Sbjct: 133 DLLQQILDCDSSERLSYQQAFLR---HLDIDPLSADKAQLREAAAKLDLSNIADTEEDR 188



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 71/204 (34%), Gaps = 28/204 (13%)

Query: 364 DESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE 423
           D S  ++      +HL+I    A + +L             D  +           +  E
Sbjct: 142 DSSERLSYQQAFLRHLDIDPLSADKAQLREAAAKLDLSNIADTEEDRDTLLQLLFTVGVE 201

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
             I      +  ++  FP                     Q  +  +   D     A +++
Sbjct: 202 PHI---GRDKPAFVYHFP-------------------ASQASLAVISTEDHR--VAERFE 237

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGI 539
           +   G E+A+G       +  L+ F     S+E            L  A + G+P   G+
Sbjct: 238 VYFKGIELANGFHELTDGDEQLKRFEQDNRSREKRGLPQHPIDMNLIDALKHGLPDCSGV 297

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
           A G+DR+VML LGA+ + +V  FP
Sbjct: 298 ALGVDRLVMLALGAEKLSDVIAFP 321


>gi|320101031|ref|YP_004176623.1| tRNA synthetase class II (D K and N) [Desulfurococcus mucosus DSM
           2162]
 gi|319753383|gb|ADV65141.1| tRNA synthetase class II (D K and N) [Desulfurococcus mucosus DSM
           2162]
          Length = 364

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 67/176 (38%), Gaps = 4/176 (2%)

Query: 96  LSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155
           L  ++  +L    +       +         +   + +R   + + +   + ++ +MR  
Sbjct: 13  LEVEEYRVLHKPLKPEKICVDDVPSDPGEYARNYHVYVRHPRVLRAVKTYSMVLKAMRSI 72

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +    F E  +PI+   S  G R  +  S    G  Y +  +   YKQ L AS   + + 
Sbjct: 73  LDEHGFTELPSPIIGYVSDPGLRGAVKASIKMYGKVYEVQSSVIMYKQ-LYASLLGKIYY 131

Query: 216 IAPCFRDED---PRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
            A   R E      + R   EF QLD+E S    DD++   E  L G  +   N +
Sbjct: 132 AARNLRVEPVENASTGRHLAEFTQLDVEASLTTADDVMMLAEETLYGAVKHLLNYH 187


>gi|116747527|ref|YP_844214.1| tRNA synthetase, class II (D, K and N) [Syntrophobacter
           fumaroxidans MPOB]
 gi|116696591|gb|ABK15779.1| tRNA synthetase, class II (D, K and N) [Syntrophobacter
           fumaroxidans MPOB]
          Length = 308

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 7/123 (5%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQA 197
              +  R+R+I  +R       F+E  TP+LT + +PE     L    V  G  + L  +
Sbjct: 11  RDALELRSRVIERIRSHFRRAGFLEVQTPLLTPAPAPE-----LNIEAVPAGDGFFLATS 65

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ Y + L+A+G+ + FQ+ P FR  +      P EF  L+   +     D+      +L
Sbjct: 66  PELYMKRLLAAGYGKLFQLTPVFRSGERGRLHHP-EFTLLEWYRTGASYKDMQRDCVELL 124

Query: 258 RGV 260
             V
Sbjct: 125 HEV 127



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 3/95 (3%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D     A +++L   G E+A+G           + F  V   +         +  AF  
Sbjct: 210 KDSAPPVAERFELYWAGIELANGFTELTDPAEQRKRFEAVLADRHEAGLSSRPMPEAFLA 269

Query: 532 G---MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +P   GIA G+DR+VMLL GA +V  V  FP
Sbjct: 270 AIEHLPQCAGIALGLDRLVMLLAGADSVDRVVAFP 304


>gi|157368667|ref|YP_001476656.1| lysyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166980064|sp|A8G8T8|SYK3_SERP5 RecName: Full=Uncharacterized protein YjeA
 gi|157320431|gb|ABV39528.1| lysyl-tRNA synthetase-related protein GenX [Serratia proteamaculans
           568]
          Length = 325

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++      F   +R        G    +
Sbjct: 14  ANLLKRAAILTEIRRFFADRGVLEVETPTMSQATVTDIHLFPFQTRFVGPGAADGLTLYM 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQMGRSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE 262
           ++L+ V +
Sbjct: 133 DLLQQVLD 140



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 7/118 (5%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G      S    Q F+   
Sbjct: 210 AFVYH-FPASQASLAEISTEDHR--VAERFEVYFKGIELANGFRELTDSREQGQRFAQDN 266

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             +             L  A Q GMP   G+A G+DR+VML LGA+++ EV  FP+ +
Sbjct: 267 RKRAERGLPQHPIDNNLLDALQHGMPECSGVALGVDRLVMLALGAESLSEVLAFPVDR 324


>gi|270264987|ref|ZP_06193250.1| lysyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270040921|gb|EFA14022.1| lysyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 325

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++      F   +R        G    +
Sbjct: 14  ANLLKRAAILTEIRRFFADRGVLEVETPTMSQATVTDIHLFPFQTRFVGPGAADGLTLYM 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQMGRSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE 262
           ++L+ V +
Sbjct: 133 DLLQQVLD 140



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G      S    Q F    
Sbjct: 210 AFVYH-FPASQASLAEISTEDHR--VAERFEVYFKGIELANGFRELTDSREQRQRFDQDN 266

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             +             L  A Q GMP   G+A G+DR+VML LGA+++ EV  FP
Sbjct: 267 RKRAERGLPQHPIDNNLLDALQHGMPESSGVALGVDRLVMLALGAESLSEVLAFP 321


>gi|226322857|ref|ZP_03798375.1| hypothetical protein COPCOM_00629 [Coprococcus comes ATCC 27758]
 gi|225208643|gb|EEG90997.1| hypothetical protein COPCOM_00629 [Coprococcus comes ATCC 27758]
          Length = 72

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
            R H  +++++  +  G++    E         F+ GMPPHGG+  G++R+ M LLG  N
Sbjct: 1   QRIHDYDMLMEKLAKRGMT----EEGLETYLDTFKHGMPPHGGLGIGMERLTMQLLGEDN 56

Query: 556 VREVSLFPMS 565
           VRE +LFP  
Sbjct: 57  VRETTLFPRD 66


>gi|27904999|ref|NP_778125.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|46396878|sp|Q89A27|SYK3_BUCBP RecName: Full=Uncharacterized protein YjeA
 gi|27904397|gb|AAO27230.1| putative lysyl-tRNA synthetase [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 322

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 7/124 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N   KK+ F ++ +   Q  + ++  ND     + ++++   G E+ +G         
Sbjct: 198 EPNLNNKKLIFVYH-YPADQAILAAINDNDSR--VSDRFEVFFKGVELGNGFYELTDQAE 254

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
            ++ F    I +               ++   G+PP  GIA G+DR++ML L  K + EV
Sbjct: 255 HIRRFKLNNIQRRHKGICSVEVDQFFLKSLSRGLPPCSGIAIGLDRLIMLSLNLKTINEV 314

Query: 560 SLFP 563
             FP
Sbjct: 315 IAFP 318



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 61/165 (36%), Gaps = 11/165 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR--DFLVPSRVNQGSFYALPQA 197
           KN+ +R +II  +R        +E  TPIL+  S        F    ++ +   + +P +
Sbjct: 14  KNLHRRAKIIFEIRNYFFNLGILEVETPILSNYSVTDVNFIPFKTKLQITKKRMWLVP-S 72

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ + + L+       +QI+  FR+ +        EF  L+    +    D +  +E  L
Sbjct: 73  PEYHMKRLLVQNIGAIYQISRSFRNNEFGGPYHNPEFTMLEWYSPYCNMFDFMKKVEKFL 132

Query: 258 RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
               +              I Y  A  +Y    P L     + ++
Sbjct: 133 VFCLKVVQVKY--------ISYQRAFIKYLNIDPLLAKKRELLDL 169


>gi|73748671|ref|YP_307910.1| lysyl-tRNA synthetase-related protein [Dehalococcoides sp. CBDB1]
 gi|73660387|emb|CAI82994.1| lysyl-tRNA synthetase-related protein [Dehalococcoides sp. CBDB1]
          Length = 309

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 72/199 (36%), Gaps = 13/199 (6%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
           R +I+  +R     + F+E  TP+   S  PE    ++ P     G    L  +P+ Y +
Sbjct: 19  RMQILGLIRSFFNEQGFLEVETPVFVPSVVPE---RYIKPVECQNG---YLSTSPELYMK 72

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            ++ASG+   +QI+ CFRD + +      EF  L+      +   ++N  EN+   +  +
Sbjct: 73  RMLASGYTNIYQISRCFRDGE-KGRHHNPEFSMLEWYRVGADYLQMINDTENLFYHISMK 131

Query: 264 FSNGNTVSNNFLRICYDDAIRRYGTDKPDL----RNPIIMHNVTEHFVHSEFRVFSKILS 319
                 +      I       R       L     +P+   +          +V     S
Sbjct: 132 LFGKIQIRYLGQDIDLTPPWERLTVRDAFLNTVGWDPVNTDDEKRFDEDLVLKVIPSFQS 191

Query: 320 VNPGYEVWAIPAKGGGGNR 338
             P   +   PAK     R
Sbjct: 192 HRPTV-LLDYPAKMASLAR 209



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 59/171 (34%), Gaps = 31/171 (18%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPF--YEWN----EEEKKID-----------FAHNP-- 458
            ++ Q++ +     +E   + D       W+    ++EK+ D            +H P  
Sbjct: 139 RYLGQDIDLTPP--WERLTVRDAFLNTVGWDPVNTDDEKRFDEDLVLKVIPSFQSHRPTV 196

Query: 459 ---FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
              +      +  LK  +    +  ++    +G E+A+              F+      
Sbjct: 197 LLDYPAKMASLARLKKTNPEVAERAEF--FISGLEMANAYSELTNPLEQSARFAEEKKLI 254

Query: 516 EVVENR----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           E  +NR          A +  +P   G A GIDR+VM       +++V  F
Sbjct: 255 EAEQNRRVVTPEIFLEAVKY-LPVCTGNALGIDRLVMFFCNTDQIQDVMPF 304


>gi|238787527|ref|ZP_04631325.1| lysyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238724314|gb|EEQ15956.1| lysyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 325

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 70/179 (39%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++          +R        G    +
Sbjct: 14  ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDIHLVPFQTRFVGPGAADGLTLYM 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ + +   +   +    FLR      I     DK  LR      +++      + R
Sbjct: 133 DLLQQILDCNSAETLSYQQAFLR---HLDIDPLSADKAQLREAAAKLDLSNIADTEDDR 188



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 7/117 (5%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G       +  LQ F    
Sbjct: 210 AFVYH-FPASQASLAVISTEDHR--VAERFEVYFKGIELANGFHELTDGDEQLQRFEQDN 266

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            S+             L  A + G+P   G+A G+DR+VML LGA+ + +V  FP+ 
Sbjct: 267 RSRAKRGLPEHPIDMNLIAALKHGLPDCSGVALGVDRLVMLALGAEKLSDVIAFPVD 323


>gi|37527966|ref|NP_931311.1| lysyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|39932262|sp|Q7MZY6|SYK3_PHOLL RecName: Full=Uncharacterized protein YjeA
 gi|36787402|emb|CAE16493.1| Putative lysyl-tRNA synthetase (Lysine--tRNA ligase) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 325

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 73/180 (40%), Gaps = 7/180 (3%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF-----LVPSRVNQGSFYAL 194
            N++KR  I+  +R        +E  TP +   +    + F      V      G    L
Sbjct: 14  ANLLKRATILAEIRRFFADRGVLEVETPAMGQFTVTDIQLFSFQTEFVGPGAADGMTLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+  CFR+E+      P EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQLGRCFRNEEAGRYHNP-EFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           ++L+ + + E +   +    FLR    D +        ++   + + N+ +     +  +
Sbjct: 133 DLLQQILDCESAESLSYQQAFLRYLDIDPLSAEKEKLREIAAKLDLSNIADIEEDRDTLL 192



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E +   +K  F ++ F   Q  +  +   D     A ++++   G E+A+G      S  
Sbjct: 201 EPHIGTEKPTFIYH-FPASQASLAEISKEDHR--VAERFEVYFKGVELANGFRELTDSHE 257

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +      V      L  A + GMP   G+A G+DR+VML LGA+ + +V
Sbjct: 258 QCQRFERDNRKRAALGLPVRPIDENLIGALKQGMPECAGVALGVDRLVMLALGAEKLSDV 317

Query: 560 SLF 562
             F
Sbjct: 318 MAF 320


>gi|238757508|ref|ZP_04618693.1| lysyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238704270|gb|EEP96802.1| lysyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 332

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 70/179 (39%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++          +R        G    +
Sbjct: 21  ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDVHLVPFETRFVGPGAADGLTLYM 80

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 81  MTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 139

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ + +   +   +    FLR      I     DK  LR      +++      E R
Sbjct: 140 DLLQQILDCNSAETLSYQQAFLR---HLDIDPLSADKAQLREAAAKLDLSNIADTEEDR 195



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 7/117 (5%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G      ++  ++ F    
Sbjct: 217 AFVYH-FPASQASLAEISTEDHR--VAERFEVYFKGIELANGFHELTDADEQMKRFEQDN 273

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             +             L  A + G+P   G+A GIDR+VML LGA+ + +V  FP++
Sbjct: 274 RIRAKRGLPQNPIDMNLIAALKQGLPDCSGVALGIDRLVMLALGAERLSDVIAFPVN 330


>gi|152973029|ref|YP_001338175.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238892642|ref|YP_002917376.1| lysyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|262045412|ref|ZP_06018435.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330003261|ref|ZP_08304572.1| lysine--tRNA ligase-like protein GenX [Klebsiella sp. MS 92-3]
 gi|166229786|sp|A6TH74|SYK3_KLEP7 RecName: Full=Uncharacterized protein YjeA
 gi|150957878|gb|ABR79908.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238544958|dbj|BAH61309.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259037241|gb|EEW38489.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328537031|gb|EGF63317.1| lysine--tRNA ligase-like protein GenX [Klebsiella sp. MS 92-3]
          Length = 325

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 10/178 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  ++  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 15  NLLKRAAVMAEIRRFFTDRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGLNLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWYRPCYDMYRLINEVDD 133

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +L+ V E + +   +    F R      I     DK  LR      +++      E R
Sbjct: 134 LLQQVLECQPAESLSYQQAFQR---HLEIDPLSADKAQLREVAAKLDLSNIADTEEDR 188



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 7/116 (6%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +  F ++ F   Q  +  +   D     A ++++   G E+A+G      +      F  
Sbjct: 208 RPTFIYH-FPATQASLAQISPEDHR--VAERFEVYYKGIELANGFHELTDAHEQRLRFEQ 264

Query: 511 VGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               +       +     L  A + G+P   G+A G+DR+VML LGA+++ EV  F
Sbjct: 265 DNRKRAARGLPQQPIDNNLLAALEAGLPDCSGVALGVDRVVMLALGAESIGEVIAF 320


>gi|7019629|gb|AAA23436.2| gene x protein (putative); putative [Escherichia coli]
          Length = 152

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +PQ + + L+ +G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 75  TSPQYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNP-EFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 134 LLQQVLD 140


>gi|269103619|ref|ZP_06156316.1| lysyl-tRNA synthetase-related protein [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163517|gb|EEZ42013.1| lysyl-tRNA synthetase-related protein [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 323

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 60/157 (38%), Gaps = 14/157 (8%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-----ARDFLVPSRVNQGSFYAL 194
             + +R ++I ++R      + +E  TP ++ ++         +   V      G    L
Sbjct: 12  AMLKQRAKLIAAIRQFFYQRDVLEVDTPAMSQATVTDIHLHTFKTEFVGPGFADGQILYL 71

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+++G    +QI   FR+E+      P EF  L+      +   +++ M+
Sbjct: 72  MTSPEFHMKRLLSAGSGAIYQICKSFRNEESGRYHNP-EFTMLEWYRPGFDHHQLMDEMD 130

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            +L+ +               R+ Y  A        P
Sbjct: 131 ELLQLIL--------GCQQAERMSYQQAFLNVLGVCP 159



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 6/111 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G       +  L  F      +  +
Sbjct: 213 FPASQAALAQINPTDNR--VAERFEVYFKGIELANGFHELANGDEQLIRFEADNHKRIEM 270

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
               +     L  A + G P   G+A GIDR++ML LG K++ +V+ FP+ 
Sbjct: 271 GLEPQPIDMNLVNALRAGFPDCAGVALGIDRLIMLALGLKHIDQVTAFPVD 321


>gi|317046678|ref|YP_004114326.1| lysyl-tRNA synthetase-like protein GenX [Pantoea sp. At-9b]
 gi|316948295|gb|ADU67770.1| lysyl-tRNA synthetase-related protein GenX [Pantoea sp. At-9b]
          Length = 325

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 57/128 (44%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++          +R      ++G    L
Sbjct: 14  ANLLKRAAIMAEIRRFFADRGVLEVDTPAMSQATITDIHLVPFQTRFVGPGASEGRDLWL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQLGRSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE 262
           ++L+ V E
Sbjct: 133 DLLQQVLE 140



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 7/119 (5%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G      S    Q F    
Sbjct: 210 TFVYH-FPASQAALAEISTEDHR--VAERFEVYYKGVELANGFRELTDSREQRQRFEQDN 266

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +             L  A + GMP   G+A G+DR++ML L A ++ EV  FP+ ++
Sbjct: 267 RRRAARGLPQHPIDTNLLDALKHGMPACSGVALGVDRLIMLALKASSLSEVIAFPVDRS 325


>gi|149910192|ref|ZP_01898838.1| lysyl-tRNA synthetase [Moritella sp. PE36]
 gi|149806778|gb|EDM66742.1| lysyl-tRNA synthetase [Moritella sp. PE36]
          Length = 324

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 60/149 (40%), Gaps = 10/149 (6%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSP-----EGARDFLVPSRVNQGSFYALPQA 197
             R +++N +R      + +E  TP L+ ++      +      V    +QG    L  +
Sbjct: 16  RARAKVLNVIREFFATRDVLEVDTPALSQAAVTDVHLDAFSTVFVGPGYSQGLTLYLQTS 75

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ + + L+A+G    +QI+  FR+E+        EF  L+      +   +++ M  +L
Sbjct: 76  PEFHMKRLLAAGSGCIYQISKSFRNEEAG-RHHNPEFTMLEWYRLGFDHFQLMDEMSELL 134

Query: 258 RGVF----EEFSNGNTVSNNFLRICYDDA 282
             V     E+          FL++    A
Sbjct: 135 TLVLGSGKEQRFTYQNAFKQFLQLDPLTA 163



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 25/134 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
            C+I DFP                     Q  +  +   D     A ++++   G E+A+
Sbjct: 208 PCFIYDFP-------------------ASQAALARISPQDSR--VAERFEVYFKGIELAN 246

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           G      ++  L+ F      ++ +    +     L  A   G P   G+A GIDR+VML
Sbjct: 247 GFHELADAKEQLRRFKADNSKRKTMALPEQPIDHHLIDALTAGFPDCAGVALGIDRLVML 306

Query: 550 LLGAKNVREVSLFP 563
              A ++ EV  FP
Sbjct: 307 ATDANSLDEVIAFP 320


>gi|322831143|ref|YP_004211170.1| lysyl-tRNA synthetase-related protein GenX [Rahnella sp. Y9602]
 gi|321166344|gb|ADW72043.1| lysyl-tRNA synthetase-related protein GenX [Rahnella sp. Y9602]
          Length = 325

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 55/128 (42%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++          +R        G    L
Sbjct: 14  ANLLKRAAILAEIRRFFADRGVLEVETPAMSQATVTDIHLVPFETRFVGPGAADGMTLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQMGRSFRNEEAG-RHHNPEFTMLEWYRPRYDMYRLMNEVD 132

Query: 255 NVLRGVFE 262
           ++L+ V +
Sbjct: 133 DLLQQVLD 140



 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 7/118 (5%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G      S    Q F    
Sbjct: 210 TFVYH-FPATQAALAEISTEDHR--VAERFEVYYKGIELANGFRELTDSREQRQRFEQDN 266

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             +             L  A + GMP   G+A G+DR++M+ LGA ++ +V  FP+++
Sbjct: 267 RKRAARGLPQHPVDNNLLDALEHGMPECSGVALGVDRLIMIALGAASLSDVLAFPVTR 324


>gi|313665429|ref|YP_004047300.1| hypothetical protein MSB_A0559 [Mycoplasma leachii PG50]
 gi|312949315|gb|ADR23911.1| conserved hypothetical protein [Mycoplasma leachii PG50]
          Length = 45

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 26/44 (59%)

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRI 591
           M+L  A+++R+V  FP + +  D +  +P  V  +QL EL ++ 
Sbjct: 1   MILTNAQSIRDVIAFPKNSSGIDPMSNAPDLVDQKQLDELHIKT 44


>gi|301096918|ref|XP_002897555.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262107015|gb|EEY65067.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 388

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 12/118 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                   +  YD++  G E+       H  +++++    
Sbjct: 280 KFPLAVRPFYTMPD--------PTDKRWSNSYDMMIRGEEMVLCAQHVHDPKLLMERMDE 331

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           +G      +          +    PHGG   G++R+VML     N+ + S+FP     
Sbjct: 332 LGAP----QESIRNYIYYLRLDSLPHGGGGIGLERVVMLYFCLGNICKSSMFPRDPKR 385



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ-LLMASGFDRYFQIAP 218
           +++E  TP L   +     ++      +Q +  A  Q+PQ YK      +  +R F+I P
Sbjct: 166 DYVEIHTPKLVGGASGSGANYFTLKYFDQDANLA--QSPQTYKHMECDVASRERVFEIVP 223

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTV 270
            FR E   + R   E   LD+EM+       +L   E  L  + +E  + N  
Sbjct: 224 GFRAETSNTHRHMCELVGLDLEMTIKAHYHKVLTEKEKWLGRLIKEKYDTNFY 276


>gi|260779586|ref|ZP_05888476.1| lysyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260604395|gb|EEX30699.1| lysyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 323

 Score = 78.6 bits (192), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 63/153 (41%), Gaps = 16/153 (10%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYALPQAP 198
           R  +I  +R      + +E  TP ++ ++           DF+ P    +G    L  +P
Sbjct: 17  RANLIRQVRQFFDDRDVLEVDTPAMSHATVTDIHLHTFQTDFVGPGYA-KGKKLYLMTSP 75

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+A+G    +QI   FR+E+      P EF  L+      +   +++ M+++L+
Sbjct: 76  EFHMKRLLAAGSGCIYQICKSFRNEENGRYHNP-EFTMLEWYRIGFDHHQLMDEMDDLLQ 134

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            + +             R+ Y  A  +  +  P
Sbjct: 135 RLLK--------VGAAERMTYQQAFLQVLSVCP 159



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 78/234 (33%), Gaps = 37/234 (15%)

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
           G  +    D M++  +            ++  +  +       + L++   EA    L +
Sbjct: 119 GFDHHQLMDEMDDLLQR---------LLKVGAAERMTYQQAFLQVLSVCPLEASMDELKV 169

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
                       P +           +  E  I         ++ DFP            
Sbjct: 170 TADKLGLSDIAQPEQDRDTLLQLLFSVGVEPEI---GQHVPVFVYDFP------------ 214

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
                    Q  +  +   D     A ++++   G E+A+G      +   L+ F +   
Sbjct: 215 -------ASQAALARINRQDSR--VADRFEVYFKGIELANGFHELDNATEQLKRFESDNA 265

Query: 514 SKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +E +    +     L +A + G+P   G+A GIDR+VML     ++ +++ FP
Sbjct: 266 KREQMGLNTQPIDNHLIKALEAGLPKCAGVALGIDRLVMLATSNDHIDKITAFP 319


>gi|238918356|ref|YP_002931870.1| lysyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259511522|sp|C5BDL9|SYK3_EDWI9 RecName: Full=Uncharacterized protein YjeA
 gi|238867924|gb|ACR67635.1| putative lysyl-tRNA synthetase-like protein GenX [Edwardsiella
           ictaluri 93-146]
          Length = 325

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 58/128 (45%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I++++R        +E  TP ++ ++          +        QG    L
Sbjct: 14  ANLLKRASILSTIRRFFSDRGVLEVDTPSMSQATVTDVHLVPFQTHFVGPGVAQGMMLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQLCRSFRNEESGRYHNP-EFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE 262
           ++L+ V E
Sbjct: 133 DLLQQVLE 140



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 7/116 (6%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +  F ++ F   Q  +  +   D     A ++++   G E+A+G      +    Q F  
Sbjct: 208 RPVFVYH-FPASQASLAQISTEDHR--VAERFEVYYRGVELANGFHELTDAAEQRQRFEQ 264

Query: 511 VGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               +       +     L  A + GMP   G+A G+DR++ML L A+ + EV  F
Sbjct: 265 DNRKRAAAGLPQQPIDEHLLAALEHGMPDSSGVALGVDRLIMLALSAERLSEVIAF 320


>gi|116332661|ref|YP_802378.1| tRNA synthetase class II (D, K and N) [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|116127528|gb|ABJ77620.1| tRNA synthetase class II (D, K and N) [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
          Length = 315

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 94/236 (39%), Gaps = 13/236 (5%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +KR + ++ +R     +N++E  TP L A  S E   D  +    ++     L  +P+  
Sbjct: 10  IKRAQFLSVLRKFFEKKNYLEMDTPCLKAVPSMEPYLDPFLVRSPSRKEKGYLITSPEYS 69

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + +++ G ++ ++I   FR  +  S     EF  L+     +  +D++N    +L  + 
Sbjct: 70  LKEILSKGLEKIYEITHTFRSGEEGSPFHSAEFLMLEFYTVGISLEDLMNFCTELLEVLD 129

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRY---GTDKPDLRNPIIMHNVTEH------FVHSEFR 312
            EF       N   +I  ++++R+Y   G  K +L   I+   ++E       +  S F 
Sbjct: 130 CEFQAFGFDRNKVRKISVEESLRKYAHCGISKSELDRVILERRLSEIPAEKRAYEDSFFI 189

Query: 313 VFSKILSV---NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
           VF  ++          ++  P +    ++        +    G   L   F  L +
Sbjct: 190 VFLNLVEAHLPKEFVFLYDYPPELAALSKIESGFAKRFELYYGSLELGNAFEELTD 245



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 6/105 (5%)

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS-EVMLQAFSNVGISKEVVEN 520
               + +L  + + S  A +++L     E+ +         E + +      + K + + 
Sbjct: 209 YPPELAAL--SKIESGFAKRFELYYGSLELGNAFEELTDPVEQISRFCHEQDLRKNLGKE 266

Query: 521 RFG---GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F    GL RA + G+P   GI+ G+DR+++ +LG  ++RE+S +
Sbjct: 267 VFSVDPGLERALREGIPDSCGISIGLDRLLLCILGGSSLREISPY 311


>gi|261344987|ref|ZP_05972631.1| lysyl-tRNA synthetase [Providencia rustigianii DSM 4541]
 gi|282567132|gb|EFB72667.1| lysyl-tRNA synthetase [Providencia rustigianii DSM 4541]
          Length = 325

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 77/180 (42%), Gaps = 7/180 (3%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N+++R +II  +R        +E  TP ++ ++          +R       QG    L
Sbjct: 14  ANLLQRAKIIAEIRRFFADRCVLEVDTPAMSQATVTDIHLVPFETRFVGPGAAQGINLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q++  FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQMSRSFRNEEAG-RHHNPEFTMLEWYRPHFDMYRLINEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           ++L+ V E + +   +    FLR    D +    ++  D+   + + N+ +     +  +
Sbjct: 133 DLLQQVLECDSAELLSYQQAFLRHLNIDPLSAEKSELRDVAARLDLSNIADQEEDRDTLL 192



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 8/121 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           +K     H P T     + S + +      A ++++   G E+A+G           Q F
Sbjct: 207 DKPAVVYHFPATQASLAVISTEDH----RVAERFEVYYKGMELANGFHELTDVHEQRQRF 262

Query: 509 SNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +  +    +     L  A + G+P   G+A G+DR++ML L A+ + +V  FP+
Sbjct: 263 EQDNRKRAAMGLPIQPIDEHLLAALEHGLPDCSGVAVGVDRLMMLALNAERISDVIAFPV 322

Query: 565 S 565
           +
Sbjct: 323 T 323


>gi|89075323|ref|ZP_01161745.1| lysyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89048872|gb|EAR54441.1| lysyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 322

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 6/112 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G       +  LQ F      +  +
Sbjct: 212 FPASQAALAQINPTDPR--VAERFEVYFKGIELANGFHELANGDEQLQRFEQDNQKRLEM 269

Query: 519 ENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             +       L  A + G P   G+A GIDR++ML LG  ++ +V+ FP+ +
Sbjct: 270 GLKLQPIDMNLVNALRAGFPDCAGVALGIDRLIMLALGLDHIEKVTAFPIDR 321



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 8/124 (6%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYALPQA 197
           KR  ++  +R    A + +E  TP ++ ++           +F+ P   + G    L  +
Sbjct: 15  KRAHLLAVIRQFFAARDVMEVDTPAMSQATVTDVHLHTFQTEFVGPGYAD-GQTLFLMTS 73

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ + + L+++G    +QI   FR+E+      P EF  L+      +   ++N M ++L
Sbjct: 74  PEFHMKRLLSAGSGAIYQICKSFRNEESGRYHNP-EFTMLEWYRPNFDHHLLMNEMNDLL 132

Query: 258 RGVF 261
           + V 
Sbjct: 133 QLVL 136


>gi|253991217|ref|YP_003042573.1| lysyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253782667|emb|CAQ85831.1| putative lysyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 342

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 76/180 (42%), Gaps = 7/180 (3%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ S+      F   +       + G    L
Sbjct: 31  ANLLKRATILAEIRRFFADRGVLEVETPAMSQSTVTDIHLFPFQTEFVGPGASDGMTLYL 90

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q++ CFR+E+      P EF  L+      +   ++N ++
Sbjct: 91  MTSPEYHMKRLLAAGSGSIYQLSRCFRNEEAGRYHNP-EFTMLEWYRPHYDMYRLINEVD 149

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           ++L+ + + E +   +    FLR    D +        ++   + + N+ +     +  +
Sbjct: 150 DLLQQILDCESAELLSYQQAFLRYLDIDPLSAEKEKLREVAAKLDLSNIADTEEDRDTLL 209



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 6/108 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE-- 516
           F   Q  +  +   D     A ++++   G E+A+G       +   Q F      +   
Sbjct: 232 FPASQASLAEISKEDHR--VAERFEVYFKGVELANGFRELTDGDEQRQRFERDNCKRTGL 289

Query: 517 --VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              V      L  A + GMP   G+A G+DR+VML L A+ + +V  F
Sbjct: 290 GLPVRPVDENLIGALKQGMPECAGVALGVDRLVMLALAAEKLSDVIAF 337


>gi|146331864|gb|ABQ22438.1| lysyl-tRNA synthetase-like protein [Callithrix jacchus]
          Length = 180

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 4/108 (3%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 62  KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 121

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST 578
            G+PP  G   GIDR+ M L  + N++EV LFP  +        +P+ 
Sbjct: 122 YGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMKPEDKKENVAPTE 169


>gi|57641485|ref|YP_183963.1| asparagine synthetase A [Thermococcus kodakarensis KOD1]
 gi|57159809|dbj|BAD85739.1| asparaginyl-tRNA synthetase-related protein (N-truncation)
           [Thermococcus kodakarensis KOD1]
          Length = 299

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 79/199 (39%), Gaps = 19/199 (9%)

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-----GARDFLVPSR 185
           + +    +   +  +T  I  +   + +  F      +L++ +        A     P  
Sbjct: 4   VQMVSRRIEPVVRVQTEAIRYLTSELTSRGFRWLLPVMLSSITDPLWPDPAASKMRAPEI 63

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDMEMSF 243
              GS   L  +   +KQ  +A G ++ F ++P  R E+  SD  R   EF QLD E+S 
Sbjct: 64  EAYGSKLKLMHSMILHKQFAVAMGLEKIFVLSPNIRLEERESDDGRHAYEFTQLDFEISH 123

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDKP--- 291
              DD++  +E ++ G+F E       +           F R   ++ I  +G+++    
Sbjct: 124 ASMDDVMRLVEELIVGLFRELRGPVWETFERELPRVKRPFKRFTLEEVIEEFGSEEKASR 183

Query: 292 DLRNPIIMHNVTEHFVHSE 310
           ++  P  + ++   F   E
Sbjct: 184 EMGEPFWITDIPREFYDRE 202



 Score = 50.1 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 44/125 (35%), Gaps = 11/125 (8%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN---GFEIASGGIRNHM 500
           E+  EEK       PF             ++  +    YDL      G   + G      
Sbjct: 174 EFGSEEKASREMGEPF-WITDIPREFYDREVDGVWRN-YDLYLPEGYGEVSSGGEREWEY 231

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP-PHGGIAAGIDRIVMLLLGAKNVREV 559
            ++  +          + E  F       + GM  P  G   GI+R+V  ++GAK++ EV
Sbjct: 232 EKIQRKIREA-----GLSEEAFRPYLEVAKAGMLKPSAGAGIGIERLVRYIVGAKHIAEV 286

Query: 560 SLFPM 564
             FP 
Sbjct: 287 QPFPR 291


>gi|218551427|ref|YP_002385219.1| lysyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226737087|sp|B7LLT9|SYK3_ESCF3 RecName: Full=Uncharacterized protein YjeA
 gi|218358969|emb|CAQ91629.1| lysyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|324112245|gb|EGC06223.1| tRNA synthetase class II [Escherichia fergusonii B253]
 gi|325499693|gb|EGC97552.1| lysyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 325

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 78/215 (36%), Gaps = 18/215 (8%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 15  NLLKRAAIMTEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLVAGCGPIFQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN---PIIMHNVTEHFVHSEF 311
           +L+ V +   +   +    F R      I     DK  LR     + + NV +     + 
Sbjct: 134 LLQQVLDCAPAESLSYQQAFQR---YLEIDPLSADKAQLREAAAKLDLSNVADEEEDRDT 190

Query: 312 RV-----FSKILSVNPGYEVWAIPAKGGGGNRAFC 341
            +     F    ++      +         + A  
Sbjct: 191 LLQLLFTFGVEPNIGKEKPTFVYHFPASQASLAQI 225



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 201 EPNIGKEKPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDARE 257

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +             L  A + GMP   G+A G+DR+VML LGA+ + +V
Sbjct: 258 QEQRFEQDNRKRAARGLPQHPIDHNLIEALKVGMPDCSGVALGVDRLVMLALGAERLSDV 317

Query: 560 SLF 562
             F
Sbjct: 318 IAF 320


>gi|206580741|ref|YP_002240886.1| lysyl-tRNA synthetase homolog GenX [Klebsiella pneumoniae 342]
 gi|288937542|ref|YP_003441601.1| lysyl-tRNA synthetase-related protein GenX [Klebsiella variicola
           At-22]
 gi|290512281|ref|ZP_06551648.1| lysyl-tRNA synthetase GenX [Klebsiella sp. 1_1_55]
 gi|238064861|sp|B5Y345|SYK3_KLEP3 RecName: Full=Uncharacterized protein YjeA
 gi|206569799|gb|ACI11575.1| lysyl-tRNA synthetase homolog GenX [Klebsiella pneumoniae 342]
 gi|288892251|gb|ADC60569.1| lysyl-tRNA synthetase-related protein GenX [Klebsiella variicola
           At-22]
 gi|289775276|gb|EFD83277.1| lysyl-tRNA synthetase GenX [Klebsiella sp. 1_1_55]
          Length = 325

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 10/178 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  ++  +R        +E  TP ++ ++      F   +R      +QG    L 
Sbjct: 15  NLLKRAAVMAEIRRFFTDRGVLEVETPCMSQATVTDIHLFPFETRFVGPGHSQGLNLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWYRPCYDMYRLINEVDD 133

Query: 256 VLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           +L+ V E + +   +    F R      I     DK  LR      +++      E R
Sbjct: 134 LLQQVLECQPAESLSYQQAFQR---HLDIDPLSADKTQLREVAAKLDLSNIADTEEDR 188



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 7/116 (6%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +  F ++ F   Q  +  +   D     A ++++   G E+A+G      +      F  
Sbjct: 208 RPTFIYH-FPATQASLAQISPEDHR--VAERFEVYYKGIELANGFHELTDAREQRLRFEQ 264

Query: 511 VGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               +       +     L  A + G+P   G+A G+DR+VML LGA+++ EV  F
Sbjct: 265 DNRKRAARGLPQQPIDNNLLAALEAGLPDCSGVALGVDRVVMLALGAESIGEVIAF 320


>gi|81248010|gb|ABB68718.1| putative lysyl-tRNA synthetase [Shigella boydii Sb227]
          Length = 335

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 25  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLM 84

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 85  TSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNP-EFTMLEWYRPHYDMYRLMNEVDD 143

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 144 LLQQVLD 150



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 211 EPNIGKEKPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDARE 267

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +             L  A + GMP   G+A G+DR+VML LGA+ + EV
Sbjct: 268 QQQRFEQDNRKRATRGLPQHPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEV 327

Query: 560 SLF 562
             F
Sbjct: 328 IAF 330


>gi|238756164|ref|ZP_04617484.1| lysyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238705638|gb|EEP98035.1| lysyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 325

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 55/128 (42%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDF---LVPSRVNQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++        F    V      G    +
Sbjct: 14  ANLLKRAAIMAEIRRFFADRGVLEIETPAMSQATVTDIHLSPFETRFVGPGAADGMTLYM 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGSIYQMGRSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE 262
           ++L+ V +
Sbjct: 133 DLLQQVLD 140



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 7/118 (5%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G      +   L+ F    
Sbjct: 210 AFVYH-FPASQAALAEISTEDHR--VAERFEVYFKGMELANGFHELTDANEQLKRFEQDN 266

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             + V           L  A Q GMP   G+A G+DR+VML LGA+ + EV  FP+ +
Sbjct: 267 RRRSVLGLPQNPIDMHLIDALQHGMPDCSGVALGVDRLVMLALGAERLSEVIAFPVDR 324


>gi|51244698|ref|YP_064582.1| lysyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|50875735|emb|CAG35575.1| probable lysyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 300

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 79/205 (38%), Gaps = 11/205 (5%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQ 196
           ++  +  R   + ++R     + F+E  TP+ +    PE   + +       G F+ L  
Sbjct: 3   VNAGLHTRAAFLQAIRAFFYEQGFLEVDTPVRSPVLIPESTIEPISC-----GDFF-LQT 56

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+ Y + ++A+G ++ FQI PCFR  + R      EF  L+      +   ++   + +
Sbjct: 57  SPELYMKRILAAGNEKIFQICPCFRKGE-RGRLHAEEFTMLEWYRLDEDYHALMADCQQL 115

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRYGT-DKPDLRNPIIMHN--VTEHFVHSEFRV 313
           +  + E      +      R   + + +R    +   L +PI +      + F       
Sbjct: 116 VSYLAEALQAHTSELGRIDRAYLNGSWQRLTVAEAFALWSPIELKQAMADDIFEEMLVEY 175

Query: 314 FSKILSVNPGYEVWAIPAKGGGGNR 338
               L ++    ++  PA      R
Sbjct: 176 IEPRLGIDSPTFLYDYPASMASLAR 200



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 21/130 (16%)

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           +D P + ++            +      +  L  ++     A +++L  +G E+A+G   
Sbjct: 182 IDSPTFLYD------------YPASMASLARLSASNSE--VAERFELYMHGIELANGFSE 227

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC-----GMPPHGGIAAGIDRIVMLLLG 552
               EV  +      ++    E R+       +      G+    GIA G+DR++ML LG
Sbjct: 228 LTD-EVEQEMRFKEELAAIKREGRWQATL-PVKFLQELAGLDKATGIALGLDRLLMLFLG 285

Query: 553 AKNVREVSLF 562
            +++ EV  F
Sbjct: 286 KESIAEVVSF 295


>gi|323494462|ref|ZP_08099568.1| poxB regulator PoxA [Vibrio brasiliensis LMG 20546]
 gi|323311285|gb|EGA64443.1| poxB regulator PoxA [Vibrio brasiliensis LMG 20546]
          Length = 323

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 62/157 (39%), Gaps = 16/157 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYAL 194
            + +R  +IN +R      N +E  TP ++ ++           +F+ P   +    + +
Sbjct: 13  QLRQRAYLINQIRNFFTERNVLEVDTPAMSHATVTDVHLHTFQTEFVGPGYADGSKLFFM 72

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +QI   FR+E+        EF  L+      +   +++ M+
Sbjct: 73  -TSPEFHMKRLLAAGSGCIYQINKAFRNEE-NGRHHNPEFTMLEWYRVDFDHHKLMDEMD 130

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            +L+ V +             R+ Y  A        P
Sbjct: 131 ELLQLVLK--------CAAAERMTYQQAFIDVLGVCP 159



 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 73/232 (31%), Gaps = 37/232 (15%)

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
            +    D M+E         L  +  +   +  +         L +   E     L    
Sbjct: 121 DHHKLMDEMDE---------LLQLVLKCAAAERMTYQQAFIDVLGVCPLEGSMAELKAVA 171

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
                    +P +           I  E  I         ++ DFP              
Sbjct: 172 ATLGLSDIAEPEQDRDTLLQLLFSIGVEAKI---GQTVPAFVYDFP-------------- 214

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
                  Q  +  +   D     A ++++   G E+A+G          L+ F +    +
Sbjct: 215 -----ASQAALAKINQQDPR--VADRFEVYFKGIELANGFHELDNPGEQLKRFESDNAKR 267

Query: 516 EVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             +    +     L  A + G+P   G+A GIDR++ML +G  ++ +V+ FP
Sbjct: 268 LEMGLKPQPIDYHLIAALESGLPECAGVALGIDRLIMLAIGCDHIDQVTAFP 319


>gi|253700783|ref|YP_003021972.1| tRNA synthetase class II (D K and N) [Geobacter sp. M21]
 gi|251775633|gb|ACT18214.1| tRNA synthetase class II (D K and N) [Geobacter sp. M21]
          Length = 305

 Score = 78.2 bits (191), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 66/159 (41%), Gaps = 16/159 (10%)

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALP 195
              + +V+R  I + +R     + ++E  TP  + A +PE              S + L 
Sbjct: 8   RRRQALVERGAIFSRIREFFQEKGYLEVETPFRIPAPAPEA------QIDAIPASGWFLQ 61

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+   + ++++G+ R FQI  C+RD +  + R   EF  L+   S  +   ++   E 
Sbjct: 62  TSPELCMKRMLSAGYPRIFQICRCWRDGERGA-RHLSEFTMLEWYRSEADYLVLMEETEA 120

Query: 256 VLRGVFEEFSN--------GNTVSNNFLRICYDDAIRRY 286
           +++      +            +S  + RI   DA  RY
Sbjct: 121 LVQHAAATAATGSIGYRGYRIELSGKWERITVADAFLRY 159



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 13/111 (11%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF-------SNV 511
           +      +  LK +D     A +++L   G EIA+              F       +  
Sbjct: 196 YPASCSALARLKPSDP--TVAERFELYIGGLEIANAFSELIDPVEQRARFVAEAAERAAQ 253

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G +   +  +F          MP   GIA G+DR+VM+LL A+ + +V  F
Sbjct: 254 GKTGYPMPEKFLASLDE----MPEAAGIALGLDRLVMVLLDAETIDDVVAF 300


>gi|254037171|ref|ZP_04871248.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|226840277|gb|EEH72279.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
          Length = 335

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 25  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLM 84

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 85  TSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNP-EFTMLEWYRPHYDMYRLMNEVDD 143

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 144 LLQQVLD 150



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 211 EPNIGKEKPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDARE 267

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +             L  A + GMP   G+A G+DR+VML LGA+ + EV
Sbjct: 268 QQQRFEQDNRKRAARGLPQHPIDQNLIDALKVGMPDCSGVALGVDRLVMLALGAETLAEV 327

Query: 560 SLF 562
             F
Sbjct: 328 IAF 330


>gi|331650284|ref|ZP_08351356.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli M605]
 gi|26111483|gb|AAN83665.1|AE016771_176 Putative lysyl-tRNA synthetase [Escherichia coli CFT073]
 gi|331040678|gb|EGI12836.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli M605]
          Length = 352

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 42  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLM 101

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 102 TSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNP-EFTMLEWYRPHYDMYRLMNEVDD 160

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 161 LLQQVLD 167



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 228 EPNIGKEKPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDARE 284

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +             L  A + GMP   G+A G+DR+VML LGA+ + EV
Sbjct: 285 QQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEV 344

Query: 560 SLF 562
             F
Sbjct: 345 IAF 347


>gi|117626504|ref|YP_859827.1| lysyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|237703824|ref|ZP_04534305.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|331644905|ref|ZP_08346022.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli H736]
 gi|331655988|ref|ZP_08356976.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli M718]
 gi|331665824|ref|ZP_08366718.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA143]
 gi|331671065|ref|ZP_08371898.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA271]
 gi|331680290|ref|ZP_08380949.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli H591]
 gi|331681177|ref|ZP_08381814.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli H299]
 gi|332280941|ref|ZP_08393354.1| lysyl-tRNA synthetase [Shigella sp. D9]
 gi|25391867|pir||H91270 probable lysyl-tRNA synthetase [imported] - Escherichia coli
           (strain O157:H7, substrain RIMD 0509952)
 gi|25501226|pir||H86111 probable lysyl-tRNA synthetase yjeA [imported] - Escherichia coli
           (strain O157:H7, substrain EDL933)
 gi|12519142|gb|AAG59356.1|AE005649_1 putative lysyl-tRNA synthetase [Escherichia coli O157:H7 str.
           EDL933]
 gi|536999|gb|AAA97054.1| lysyl-tRNA synthetase analog [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13364613|dbj|BAB38559.1| putative lysyl-tRNA synthetase [Escherichia coli O157:H7 str.
           Sakai]
 gi|73858122|gb|AAZ90829.1| putative lysyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|81243576|gb|ABB64286.1| putative lysyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|115515628|gb|ABJ03703.1| lysyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|209750398|gb|ACI73506.1| putative lysyl-tRNA synthetase [Escherichia coli]
 gi|209750400|gb|ACI73507.1| putative lysyl-tRNA synthetase [Escherichia coli]
 gi|209750402|gb|ACI73508.1| putative lysyl-tRNA synthetase [Escherichia coli]
 gi|209750404|gb|ACI73509.1| putative lysyl-tRNA synthetase [Escherichia coli]
 gi|209750406|gb|ACI73510.1| putative lysyl-tRNA synthetase [Escherichia coli]
 gi|226901736|gb|EEH87995.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|331035880|gb|EGI08118.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli H736]
 gi|331046342|gb|EGI18432.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli M718]
 gi|331056875|gb|EGI28869.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA143]
 gi|331061654|gb|EGI33580.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA271]
 gi|331071753|gb|EGI43089.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli H591]
 gi|331081398|gb|EGI52559.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli H299]
 gi|332103293|gb|EGJ06639.1| lysyl-tRNA synthetase [Shigella sp. D9]
          Length = 335

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 25  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLM 84

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 85  TSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNP-EFTMLEWYRPHYDMYRLMNEVDD 143

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 144 LLQQVLD 150



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 211 EPNIGKEKPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDARE 267

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +             L  A + GMP   G+A G+DR+VML LGA+ + EV
Sbjct: 268 QQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEV 327

Query: 560 SLF 562
             F
Sbjct: 328 IAF 330


>gi|161984787|ref|YP_410546.2| lysyl-tRNA synthetase [Shigella boydii Sb227]
 gi|332087166|gb|EGI92300.1| tRNA synthetases class II family protein [Shigella boydii 3594-74]
          Length = 325

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNP-EFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 134 LLQQVLD 140



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 201 EPNIGKEKPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDARE 257

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +             L  A + GMP   G+A G+DR+VML LGA+ + EV
Sbjct: 258 QQQRFEQDNRKRATRGLPQHPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEV 317

Query: 560 SLF 562
             F
Sbjct: 318 IAF 320


>gi|304445705|pdb|3A5Y|A Chain A, Crystal Structure Of Genx From Escherichia Coli In Complex
           With Lysyladenylate Analog
 gi|304445706|pdb|3A5Y|B Chain B, Crystal Structure Of Genx From Escherichia Coli In Complex
           With Lysyladenylate Analog
 gi|304445707|pdb|3A5Y|C Chain C, Crystal Structure Of Genx From Escherichia Coli In Complex
           With Lysyladenylate Analog
 gi|304445708|pdb|3A5Y|D Chain D, Crystal Structure Of Genx From Escherichia Coli In Complex
           With Lysyladenylate Analog
          Length = 345

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 35  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLM 94

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 95  TSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNP-EFTMLEWYRPHYDMYRLMNEVDD 153

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 154 LLQQVLD 160



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 221 EPNIGKEKPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDARE 277

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +             L  A + GMP   G+A G+DR+VML LGA+ + EV
Sbjct: 278 QQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEV 337

Query: 560 SLF 562
             F
Sbjct: 338 IAF 340


>gi|331671309|ref|ZP_08372107.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA280]
 gi|331071154|gb|EGI42511.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA280]
          Length = 335

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 25  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLM 84

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 85  TSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNP-EFTMLEWYRPHYDMYRLMNEVDD 143

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 144 LLQQVLD 150



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 211 EPNIGKEKPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDARE 267

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +             L  A + GMP   G+A G+DR+VML LGA+ + EV
Sbjct: 268 QQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEV 327

Query: 560 SLF 562
             F
Sbjct: 328 IAF 330


>gi|238764674|ref|ZP_04625618.1| lysyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238697070|gb|EEP89843.1| lysyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 332

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 70/179 (39%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++          +R        G    +
Sbjct: 21  ANLLKRAAIMAEIRRFFTDRGVLEVETPTMSQATVTDIHLVPFETRFVGPGAADGLTLYM 80

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 81  MTSPEYHMKRLLAAGSGSIYQMGRSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 139

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ + +   +   +    FLR      I     DK  LR      +++      E R
Sbjct: 140 DLLQQILDCNSAETLSYQQAFLR---HLDIDPLSADKAQLREAAAKLDLSNIADTEEDR 195



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 7/118 (5%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G       +  L+ F    
Sbjct: 217 AFVYH-FPASQASLAVISTEDHR--VAERFEVYFKGMELANGFHELTDGDEQLKRFEQDN 273

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            S+E            L  A + G+P   G+A G+DR+VML LGA+ + +V  FP+ +
Sbjct: 274 RSREKRGLPQHPIDMNLIAALKHGLPDCSGVALGVDRLVMLALGAERLSDVIAFPVDR 331


>gi|320176648|gb|EFW51689.1| lysyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 325

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNP-EFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 134 LLQQVLD 140



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 201 EPNIGKEKPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDARE 257

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +             L  A + GMP   G+A G+DR+VML LG++ + EV
Sbjct: 258 QQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGSETLAEV 317

Query: 560 SLF 562
             F
Sbjct: 318 IAF 320


>gi|304445709|pdb|3A5Z|A Chain A, Crystal Structure Of Escherichia Coli Genx In Complex With
           Elongation Factor P
 gi|304445711|pdb|3A5Z|C Chain C, Crystal Structure Of Escherichia Coli Genx In Complex With
           Elongation Factor P
 gi|304445713|pdb|3A5Z|E Chain E, Crystal Structure Of Escherichia Coli Genx In Complex With
           Elongation Factor P
 gi|304445715|pdb|3A5Z|G Chain G, Crystal Structure Of Escherichia Coli Genx In Complex With
           Elongation Factor P
          Length = 328

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 18  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLM 77

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 78  TSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNP-EFTMLEWYRPHYDMYRLMNEVDD 136

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 137 LLQQVLD 143



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 204 EPNIGKEKPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDARE 260

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +             L  A + GMP   G+A G+DR+VML LGA+ + EV
Sbjct: 261 QQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEV 320

Query: 560 SLF 562
             F
Sbjct: 321 IAF 323


>gi|170021832|ref|YP_001726786.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|194434730|ref|ZP_03066982.1| lysyl-tRNA synthetase homolog GenX [Shigella dysenteriae 1012]
 gi|300905988|ref|ZP_07123712.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 84-1]
 gi|300920820|ref|ZP_07137220.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 115-1]
 gi|300949115|ref|ZP_07163158.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 116-1]
 gi|300957815|ref|ZP_07169994.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 175-1]
 gi|301302575|ref|ZP_07208705.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 124-1]
 gi|307312006|ref|ZP_07591643.1| lysyl-tRNA synthetase-related protein GenX [Escherichia coli W]
 gi|312965833|ref|ZP_07780059.1| tRNA synthetase class II family protein [Escherichia coli 2362-75]
 gi|189082339|sp|B1ITP1|SYK3_ECOLC RecName: Full=Uncharacterized protein YjeA
 gi|169756760|gb|ACA79459.1| lysyl-tRNA synthetase-related protein GenX [Escherichia coli ATCC
           8739]
 gi|194417011|gb|EDX33128.1| lysyl-tRNA synthetase homolog GenX [Shigella dysenteriae 1012]
 gi|300315475|gb|EFJ65259.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 175-1]
 gi|300402155|gb|EFJ85693.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 84-1]
 gi|300412212|gb|EFJ95522.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 115-1]
 gi|300451425|gb|EFK15045.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 116-1]
 gi|300842100|gb|EFK69860.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 124-1]
 gi|306907813|gb|EFN38314.1| lysyl-tRNA synthetase-related protein GenX [Escherichia coli W]
 gi|312289076|gb|EFR16970.1| tRNA synthetase class II family protein [Escherichia coli 2362-75]
 gi|315063474|gb|ADT77801.1| predicted lysyl-tRNA synthetase [Escherichia coli W]
 gi|315255502|gb|EFU35470.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 85-1]
 gi|320180673|gb|EFW55600.1| lysyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|332083157|gb|EGI88388.1| tRNA synthetases class II family protein [Shigella boydii 5216-82]
 gi|332083621|gb|EGI88839.1| tRNA synthetases class II family protein [Shigella dysenteriae
           155-74]
 gi|332346236|gb|AEE59570.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 325

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNP-EFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 134 LLQQVLD 140



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 201 EPNIGKEKPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDARE 257

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +             L  A + GMP   G+A G+DR+VML LGA+ + EV
Sbjct: 258 QQQRFEQDNRKRAARGLPQHPIDQNLIDALKVGMPDCSGVALGVDRLVMLALGAETLAEV 317

Query: 560 SLF 562
             F
Sbjct: 318 IAF 320


>gi|254491745|ref|ZP_05104924.1| tRNA synthetase class II (D, K and N) subfamily [Methylophaga
           thiooxidans DMS010]
 gi|224463223|gb|EEF79493.1| tRNA synthetase class II (D, K and N) subfamily [Methylophaga
           thiooxydans DMS010]
          Length = 323

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 2/119 (1%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGAR-DFLVPSRVNQGSFYALPQAPQQYK 202
           +R +++  +R      N +E  TP+L+ ++P     D         G  Y L  +P+   
Sbjct: 17  RRAQLLADVRLFFAERNVMEVQTPVLSQAAPTATYLDSFSTDYAPTGQHYYLQTSPEFAM 76

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + L+A+G    +QIAP FR+ +      P EF  L+     ++   ++  ++ +L+ + 
Sbjct: 77  KRLLAAGSGDIYQIAPVFRNGELGRLHSP-EFTMLEWYRPALDYVGLMYEVDALLQQLA 134



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 4/108 (3%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  + ++  N      A ++++   G E+A+G         + Q F      +   
Sbjct: 211 FPASQAQLANVYQNPNQQKVAARFEVYAGGLELANGYDECLDPVELKQRFERDNQLRSSQ 270

Query: 519 ENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                     L  A + G+P   G+A G+DR++ML+ G   + EV  F
Sbjct: 271 NKTVMPIDERLLAAQEAGLPACTGVAMGLDRLLMLISGKTQLSEVLSF 318


>gi|24115514|ref|NP_710024.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30065532|ref|NP_839703.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|38704236|ref|NP_313163.2| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|89110878|ref|AP_004658.1| predicted lysyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           W3110]
 gi|90111694|ref|NP_418579.2| EF-P-lysine34-lysine ligase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|91213707|ref|YP_543693.1| lysyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110644516|ref|YP_672246.1| lysyl-tRNA synthetase [Escherichia coli 536]
 gi|110808079|ref|YP_691599.1| lysyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|157155551|ref|YP_001465657.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
 gi|157163623|ref|YP_001460941.1| lysyl-tRNA synthetase [Escherichia coli HS]
 gi|161367459|ref|NP_290790.2| lysyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|161486016|ref|NP_757091.2| lysyl-tRNA synthetase [Escherichia coli CFT073]
 gi|161949986|ref|YP_405777.2| lysyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|161986385|ref|YP_313064.2| lysyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|168747981|ref|ZP_02773003.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4113]
 gi|168755345|ref|ZP_02780352.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4401]
 gi|168761025|ref|ZP_02786032.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4501]
 gi|168766435|ref|ZP_02791442.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4486]
 gi|168774534|ref|ZP_02799541.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4196]
 gi|168780588|ref|ZP_02805595.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4076]
 gi|168784793|ref|ZP_02809800.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC869]
 gi|168802334|ref|ZP_02827341.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC508]
 gi|170083604|ref|YP_001732924.1| lysyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170684036|ref|YP_001746553.1| lysyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187731526|ref|YP_001882849.1| lysyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|188493357|ref|ZP_03000627.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli 53638]
 gi|191165617|ref|ZP_03027457.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli B7A]
 gi|191173345|ref|ZP_03034874.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli F11]
 gi|193065740|ref|ZP_03046804.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli E22]
 gi|193067922|ref|ZP_03048888.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli E110019]
 gi|194428929|ref|ZP_03061462.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli B171]
 gi|194437213|ref|ZP_03069311.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli 101-1]
 gi|195935949|ref|ZP_03081331.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208805970|ref|ZP_03248307.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4206]
 gi|208812731|ref|ZP_03254060.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4045]
 gi|208821484|ref|ZP_03261804.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4042]
 gi|209395929|ref|YP_002273702.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4115]
 gi|209921648|ref|YP_002295732.1| lysyl-tRNA synthetase [Escherichia coli SE11]
 gi|215489504|ref|YP_002331935.1| lysyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|217325978|ref|ZP_03442062.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           TW14588]
 gi|218556712|ref|YP_002389626.1| lysyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218561317|ref|YP_002394230.1| lysyl-tRNA synthetase [Escherichia coli S88]
 gi|218692494|ref|YP_002400706.1| lysyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218697907|ref|YP_002405574.1| lysyl-tRNA synthetase [Escherichia coli 55989]
 gi|218702857|ref|YP_002410486.1| lysyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218707771|ref|YP_002415290.1| lysyl-tRNA synthetase [Escherichia coli UMN026]
 gi|227886799|ref|ZP_04004604.1| lysine--tRNA ligase [Escherichia coli 83972]
 gi|238903265|ref|YP_002929061.1| putative lysyl-tRNA synthetase [Escherichia coli BW2952]
 gi|253775215|ref|YP_003038046.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254164089|ref|YP_003047197.1| lysyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|254796179|ref|YP_003081016.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|256019803|ref|ZP_05433668.1| lysyl-tRNA synthetase [Shigella sp. D9]
 gi|256025093|ref|ZP_05438958.1| lysyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|260846990|ref|YP_003224768.1| putative lysyl-tRNA synthetase [Escherichia coli O103:H2 str.
           12009]
 gi|260858311|ref|YP_003232202.1| putative lysyl-tRNA synthetase [Escherichia coli O26:H11 str.
           11368]
 gi|260870934|ref|YP_003237336.1| putative lysyl-tRNA synthetase [Escherichia coli O111:H- str.
           11128]
 gi|261225280|ref|ZP_05939561.1| predicted lysyl-tRNA synthetase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255468|ref|ZP_05948001.1| putative lysyl-tRNA synthetase [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291285572|ref|YP_003502390.1| putative lysyl-tRNA synthetase [Escherichia coli O55:H7 str.
           CB9615]
 gi|293402787|ref|ZP_06646884.1| lysyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293407884|ref|ZP_06651724.1| lysyl-tRNA synthetase GenX [Escherichia coli B354]
 gi|293417663|ref|ZP_06660285.1| lysyl-tRNA synthetase GenX [Escherichia coli B185]
 gi|293476470|ref|ZP_06664878.1| lysyl-tRNA synthetase GenX [Escherichia coli B088]
 gi|297518947|ref|ZP_06937333.1| lysyl-tRNA synthetase [Escherichia coli OP50]
 gi|298378317|ref|ZP_06988201.1| lysyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300816542|ref|ZP_07096763.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 107-1]
 gi|300821251|ref|ZP_07101399.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 119-7]
 gi|300899695|ref|ZP_07117922.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 198-1]
 gi|300922435|ref|ZP_07138555.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 182-1]
 gi|300929267|ref|ZP_07144743.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 187-1]
 gi|300940646|ref|ZP_07155207.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 21-1]
 gi|300974952|ref|ZP_07172791.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 45-1]
 gi|300975245|ref|ZP_07172909.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 200-1]
 gi|301023451|ref|ZP_07187232.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 69-1]
 gi|301027978|ref|ZP_07191262.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 196-1]
 gi|301047617|ref|ZP_07194683.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 185-1]
 gi|301325922|ref|ZP_07219343.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 78-1]
 gi|301646602|ref|ZP_07246468.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 146-1]
 gi|306815625|ref|ZP_07449774.1| lysyl-tRNA synthetase [Escherichia coli NC101]
 gi|307140852|ref|ZP_07500208.1| lysyl-tRNA synthetase [Escherichia coli H736]
 gi|309787696|ref|ZP_07682307.1| tRNA synthetase class II family protein [Shigella dysenteriae 1617]
 gi|309796970|ref|ZP_07691370.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 145-7]
 gi|312974035|ref|ZP_07788206.1| tRNA synthetase class II family protein [Escherichia coli 1827-70]
 gi|67473146|sp|P0A8N7|SYK3_ECOLI RecName: Full=Uncharacterized protein YjeA; AltName: Full=GX
 gi|67473147|sp|P0A8N8|SYK3_ECOL6 RecName: Full=Uncharacterized protein YjeA
 gi|67473148|sp|P0A8N9|SYK3_ECO57 RecName: Full=Uncharacterized protein YjeA
 gi|67473149|sp|P0A8P0|SYK3_SHIFL RecName: Full=Uncharacterized protein YjeA
 gi|122421482|sp|Q1R3A2|SYK3_ECOUT RecName: Full=Uncharacterized protein YjeA
 gi|123146416|sp|Q0SXC1|SYK3_SHIF8 RecName: Full=Uncharacterized protein YjeA
 gi|123147396|sp|Q0T9N4|SYK3_ECOL5 RecName: Full=Uncharacterized protein YjeA
 gi|166980061|sp|A7ZV28|SYK3_ECO24 RecName: Full=Uncharacterized protein YjeA
 gi|166980062|sp|A8A7Q4|SYK3_ECOHS RecName: Full=Uncharacterized protein YjeA
 gi|226737082|sp|B7MKW2|SYK3_ECO45 RecName: Full=Uncharacterized protein YjeA
 gi|226737083|sp|B7NTL6|SYK3_ECO7I RecName: Full=Uncharacterized protein YjeA
 gi|226737084|sp|B7M8S0|SYK3_ECO8A RecName: Full=Uncharacterized protein YjeA
 gi|226737085|sp|B7NG94|SYK3_ECOLU RecName: Full=Uncharacterized protein YjeA
 gi|226737086|sp|B1LQH8|SYK3_ECOSM RecName: Full=Uncharacterized protein YjeA
 gi|229470733|sp|B1XDQ9|SYK3_ECODH RecName: Full=Uncharacterized protein YjeA
 gi|238064859|sp|B5Z2G6|SYK3_ECO5E RecName: Full=Uncharacterized protein YjeA
 gi|238064860|sp|B6I264|SYK3_ECOSE RecName: Full=Uncharacterized protein YjeA
 gi|238691725|sp|B2TY33|SYK3_SHIB3 RecName: Full=Uncharacterized protein YjeA
 gi|254782463|sp|B7UPX7|SYK3_ECO27 RecName: Full=Uncharacterized protein YjeA
 gi|254782464|sp|B7LC16|SYK3_ECO55 RecName: Full=Uncharacterized protein YjeA
 gi|254782465|sp|B7MSX2|SYK3_ECO81 RecName: Full=Uncharacterized protein YjeA
 gi|259511521|sp|C5A1E9|SYK3_ECOBW RecName: Full=Uncharacterized protein YjeA
 gi|41552|emb|CAA42604.1| genX [Escherichia coli]
 gi|24054839|gb|AAN45731.1| putative lysyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30043796|gb|AAP19515.1| putative lysyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|85676909|dbj|BAE78159.1| predicted lysyl-tRNA synthetase [Escherichia coli str. K12 substr.
           W3110]
 gi|87082379|gb|AAC77115.2| EF-P-lysine34-lysine ligase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|91075281|gb|ABE10162.1| putative lysyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110346108|gb|ABG72345.1| putative lysyl-tRNA synthetase [Escherichia coli 536]
 gi|110617627|gb|ABF06294.1| putative lysyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|157069303|gb|ABV08558.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli HS]
 gi|157077581|gb|ABV17289.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli E24377A]
 gi|169891439|gb|ACB05146.1| predicted lysyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170521754|gb|ACB19932.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli SMS-3-5]
 gi|187428518|gb|ACD07792.1| lysyl-tRNA synthetase homolog GenX [Shigella boydii CDC 3083-94]
 gi|187769950|gb|EDU33794.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4196]
 gi|188017485|gb|EDU55607.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4113]
 gi|188488556|gb|EDU63659.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli 53638]
 gi|189001774|gb|EDU70760.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4076]
 gi|189357394|gb|EDU75813.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364222|gb|EDU82641.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4486]
 gi|189368582|gb|EDU86998.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374902|gb|EDU93318.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC869]
 gi|189375660|gb|EDU94076.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC508]
 gi|190904312|gb|EDV64021.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli B7A]
 gi|190906321|gb|EDV65931.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli F11]
 gi|192926609|gb|EDV81239.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli E22]
 gi|192958897|gb|EDV89334.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli E110019]
 gi|194412982|gb|EDX29271.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli B171]
 gi|194423769|gb|EDX39758.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli 101-1]
 gi|208725771|gb|EDZ75372.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4206]
 gi|208734008|gb|EDZ82695.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4045]
 gi|208741607|gb|EDZ89289.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4042]
 gi|209157329|gb|ACI34762.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4115]
 gi|209914907|dbj|BAG79981.1| putative lysyl-tRNA synthase [Escherichia coli SE11]
 gi|215267576|emb|CAS12031.1| predicted lysyl-tRNA synthetase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217322199|gb|EEC30623.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           TW14588]
 gi|218354639|emb|CAV01619.1| lysyl-tRNA synthetase [Escherichia coli 55989]
 gi|218363481|emb|CAR01135.1| lysyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218368086|emb|CAR05893.1| lysyl-tRNA synthetase [Escherichia coli S88]
 gi|218372843|emb|CAR20722.1| lysyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218430058|emb|CAR11047.2| lysyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218434868|emb|CAR15806.1| lysyl-tRNA synthetase [Escherichia coli UMN026]
 gi|222035930|emb|CAP78675.1| lysyl-tRNA synthetase [Escherichia coli LF82]
 gi|227836141|gb|EEJ46607.1| lysine--tRNA ligase [Escherichia coli 83972]
 gi|238862640|gb|ACR64638.1| predicted lysyl-tRNA synthetase [Escherichia coli BW2952]
 gi|242379683|emb|CAQ34506.1| predicted regulator of pyruvate oxidase [Escherichia coli
           BL21(DE3)]
 gi|253326259|gb|ACT30861.1| lysyl-tRNA synthetase-related protein GenX [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975990|gb|ACT41661.1| lysyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253980146|gb|ACT45816.1| lysyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|254595579|gb|ACT74940.1| predicted lysyl-tRNA synthetase [Escherichia coli O157:H7 str.
           TW14359]
 gi|257756960|dbj|BAI28462.1| predicted lysyl-tRNA synthetase [Escherichia coli O26:H11 str.
           11368]
 gi|257762137|dbj|BAI33634.1| predicted lysyl-tRNA synthetase [Escherichia coli O103:H2 str.
           12009]
 gi|257767290|dbj|BAI38785.1| predicted lysyl-tRNA synthetase [Escherichia coli O111:H- str.
           11128]
 gi|260451015|gb|ACX41437.1| lysyl-tRNA synthetase-related protein GenX [Escherichia coli DH1]
 gi|281181255|dbj|BAI57585.1| putative lysyl-tRNA synthetase [Escherichia coli SE15]
 gi|281603622|gb|ADA76606.1| putative lysyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|284924341|emb|CBG37457.1| putative lysyl-tRNA synthetase [Escherichia coli 042]
 gi|290765445|gb|ADD59406.1| Putative lysyl-tRNA synthetase [Escherichia coli O55:H7 str.
           CB9615]
 gi|291320923|gb|EFE60365.1| lysyl-tRNA synthetase GenX [Escherichia coli B088]
 gi|291429702|gb|EFF02716.1| lysyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291430381|gb|EFF03379.1| lysyl-tRNA synthetase GenX [Escherichia coli B185]
 gi|291472135|gb|EFF14617.1| lysyl-tRNA synthetase GenX [Escherichia coli B354]
 gi|294490729|gb|ADE89485.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli IHE3034]
 gi|298280651|gb|EFI22152.1| lysyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|299878888|gb|EFI87099.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 196-1]
 gi|300300496|gb|EFJ56881.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 185-1]
 gi|300308744|gb|EFJ63264.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 200-1]
 gi|300356738|gb|EFJ72608.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 198-1]
 gi|300397003|gb|EFJ80541.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 69-1]
 gi|300410440|gb|EFJ93978.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 45-1]
 gi|300421254|gb|EFK04565.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 182-1]
 gi|300454534|gb|EFK18027.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 21-1]
 gi|300462760|gb|EFK26253.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 187-1]
 gi|300526140|gb|EFK47209.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 119-7]
 gi|300530772|gb|EFK51834.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 107-1]
 gi|300847275|gb|EFK75035.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 78-1]
 gi|301075149|gb|EFK89955.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 146-1]
 gi|305851287|gb|EFM51742.1| lysyl-tRNA synthetase [Escherichia coli NC101]
 gi|307556327|gb|ADN49102.1| putative lysyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|307629229|gb|ADN73533.1| lysyl-tRNA synthetase [Escherichia coli UM146]
 gi|308119383|gb|EFO56645.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 145-7]
 gi|308924446|gb|EFP69942.1| tRNA synthetase class II family protein [Shigella dysenteriae 1617]
 gi|309704663|emb|CBJ04013.1| putative lysyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310331569|gb|EFP98825.1| tRNA synthetase class II family protein [Escherichia coli 1827-70]
 gi|312948809|gb|ADR29636.1| lysyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|313646371|gb|EFS10833.1| tRNA synthetase class II family protein [Shigella flexneri 2a str.
           2457T]
 gi|315138712|dbj|BAJ45871.1| putative lysyl-tRNA synthetase [Escherichia coli DH1]
 gi|315288504|gb|EFU47902.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 110-3]
 gi|315294064|gb|EFU53416.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 153-1]
 gi|320187543|gb|EFW62227.1| lysyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320190708|gb|EFW65358.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320193538|gb|EFW68175.1| lysyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|320200710|gb|EFW75296.1| lysyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|320638918|gb|EFX08564.1| poxB regulator PoxA [Escherichia coli O157:H7 str. G5101]
 gi|320644287|gb|EFX13352.1| poxB regulator PoxA [Escherichia coli O157:H- str. 493-89]
 gi|320649605|gb|EFX18129.1| poxB regulator PoxA [Escherichia coli O157:H- str. H 2687]
 gi|320655001|gb|EFX22962.1| poxB regulator PoxA [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320660508|gb|EFX27969.1| poxB regulator PoxA [Escherichia coli O55:H7 str. USDA 5905]
 gi|320665777|gb|EFX32814.1| poxB regulator PoxA [Escherichia coli O157:H7 str. LSU-61]
 gi|323156025|gb|EFZ42187.1| tRNA synthetases class II family protein [Escherichia coli EPECa14]
 gi|323162079|gb|EFZ47950.1| tRNA synthetases class II family protein [Escherichia coli E128010]
 gi|323166767|gb|EFZ52524.1| tRNA synthetases class II family protein [Shigella sonnei 53G]
 gi|323171591|gb|EFZ57237.1| tRNA synthetases class II family protein [Escherichia coli LT-68]
 gi|323176084|gb|EFZ61676.1| tRNA synthetases class II family protein [Escherichia coli 1180]
 gi|323182264|gb|EFZ67674.1| tRNA synthetases class II family protein [Escherichia coli 1357]
 gi|323189961|gb|EFZ75239.1| tRNA synthetases class II family protein [Escherichia coli RN587/1]
 gi|323380449|gb|ADX52717.1| lysyl-tRNA synthetase-related protein GenX [Escherichia coli KO11]
 gi|323935473|gb|EGB31811.1| tRNA synthetase class II [Escherichia coli E1520]
 gi|323946096|gb|EGB42132.1| tRNA synthetase class II [Escherichia coli H120]
 gi|323950773|gb|EGB46651.1| tRNA synthetase class II [Escherichia coli H252]
 gi|323955588|gb|EGB51351.1| tRNA synthetase class II [Escherichia coli H263]
 gi|323960346|gb|EGB55985.1| tRNA synthetase class II [Escherichia coli H489]
 gi|323970585|gb|EGB65844.1| tRNA synthetase class II [Escherichia coli TA007]
 gi|324008600|gb|EGB77819.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 57-2]
 gi|324015048|gb|EGB84267.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 60-1]
 gi|324019337|gb|EGB88556.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 117-3]
 gi|324118725|gb|EGC12617.1| tRNA synthetase class II [Escherichia coli E1167]
 gi|326341790|gb|EGD65573.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|326346635|gb|EGD70369.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|330908501|gb|EGH37020.1| lysyl-tRNA synthetase [Escherichia coli AA86]
 gi|332749032|gb|EGJ79455.1| tRNA synthetases class II family protein [Shigella flexneri K-671]
 gi|332749300|gb|EGJ79721.1| tRNA synthetases class II family protein [Shigella flexneri
           4343-70]
 gi|332761930|gb|EGJ92204.1| tRNA synthetases class II family protein [Shigella flexneri
           2747-71]
 gi|332763203|gb|EGJ93446.1| regulator of pyruvate oxidase [Shigella flexneri 2930-71]
 gi|333009090|gb|EGK28546.1| tRNA synthetases class II family protein [Shigella flexneri K-218]
 gi|333010307|gb|EGK29740.1| tRNA synthetases class II family protein [Shigella flexneri VA-6]
 gi|333011141|gb|EGK30555.1| tRNA synthetases class II family protein [Shigella flexneri K-272]
 gi|333012003|gb|EGK31388.1| tRNA synthetases class II family protein [Shigella flexneri K-304]
 gi|333012665|gb|EGK32045.1| tRNA synthetases class II family protein [Shigella flexneri K-227]
          Length = 325

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNP-EFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 134 LLQQVLD 140



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 201 EPNIGKEKPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDARE 257

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +             L  A + GMP   G+A G+DR+VML LGA+ + EV
Sbjct: 258 QQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEV 317

Query: 560 SLF 562
             F
Sbjct: 318 IAF 320


>gi|145614218|ref|XP_364052.2| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145021159|gb|EDK05288.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 289

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 17/147 (11%)

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
           + S P L  +  EG           + ++  L Q+ Q Y + ++ S     + I   FR 
Sbjct: 5   KVSPPALVQTQVEGGSTLFKFDYYGEAAY--LTQSSQLYLETVLPS-LGNVYCIEKSFRA 61

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN--------- 273
           E   + R   E+  ++ E+  +  +D+L  +E V+  V +   +   V+ +         
Sbjct: 62  EKSLTRRHLSEYTHVEGELDGINFEDLLVHIEEVICRVVDSVLDNPEVARHVKALNPDFV 121

Query: 274 -----FLRICYDDAIRRYGTDKPDLRN 295
                F+R+ Y DAI       P + N
Sbjct: 122 KPSRPFMRMKYSDAIDWLNAQDPPILN 148



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 11/121 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
                   F M +     L+  + + +      L+    EI  G +R    E ++ AF  
Sbjct: 180 HFPVEIKAFYMKK-DPNDLRVTESVDV------LMPGVGEIVGGSMRMEGYEDLMAAFKR 232

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            GI        +       + G  PHGG   G++R +  +     VR   L+P     C 
Sbjct: 233 EGIDPAP----YYWYLDQRKYGTSPHGGYGLGLERFLAWIAKQHTVRTCCLYPRFMGRCK 288

Query: 571 L 571
            
Sbjct: 289 P 289


>gi|254508180|ref|ZP_05120305.1| lysyl-tRNA synthetase family protein [Vibrio parahaemolyticus 16]
 gi|219548902|gb|EED25902.1| lysyl-tRNA synthetase family protein [Vibrio parahaemolyticus 16]
          Length = 323

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 65/157 (41%), Gaps = 16/157 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYAL 194
            + +R  ++N +R   +  + +E  TP ++ ++           +F+ P   +    Y +
Sbjct: 13  QLRQRAHLLNQIRQFFLERDVLEVDTPAMSHATVTDVHLHTFQTEFVGPGYADGSKLYFM 72

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +QI   FR+E+      P EF  L+      +   +++ M+
Sbjct: 73  -TSPEFHMKRLLAAGSGCIYQINKAFRNEENGRYHNP-EFTMLEWYRVGFDHHQLMDEMD 130

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           ++L+ V +             R+ Y  A        P
Sbjct: 131 DLLQLVLK--------CGAAERMTYQQAFMDVLGVCP 159



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 74/234 (31%), Gaps = 37/234 (15%)

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
           G  +    D M++         L  +  +   +  +         L +   E     L +
Sbjct: 119 GFDHHQLMDEMDD---------LLQLVLKCGAAERMTYQQAFMDVLGVCPLEGSMQELKV 169

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
                      +P             I  E  I         ++ DFP            
Sbjct: 170 VAAKLGLSDIAEPEDDRDTLLQLLFSIGVEAKI---GQKTPAFVYDFP------------ 214

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
                    Q  +  +   D     A +++L   G E+A+G       +  L+ F     
Sbjct: 215 -------ASQAALAKINRQDPR--VADRFELYFKGIELANGFHELDNPKEQLKRFEQDNA 265

Query: 514 SKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  +    +     L  A + G+P   G+A G+DR++ML +G  ++ +V+ FP
Sbjct: 266 KRVEMGLEPQPIDHNLIAALESGLPECAGVALGVDRLIMLAIGCDHIDQVTAFP 319


>gi|13358860|dbj|BAB33290.1| lysyl-tRNA synthetase [Acinetobacter sp. M-1]
          Length = 207

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 23/161 (14%)

Query: 4   YRTHSCGDLGVSDVGS-----------FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
            R H   DL                  +V+++G V   R      F+ I+D  G  Q+  
Sbjct: 58  KREHYAADLQEQFKDQDKAQIEGAEKVYVKVAGRVMLNRGS----FMVIQDMTGRIQLYV 113

Query: 53  NPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
           +      +I ++++S  +  I       +AE        G + +  +  E+L+ +   PL
Sbjct: 114 DRKGLPADILETIKSLDLGDI------IAAEGYIGRSGKGDLYVHLEGFELLTKSLR-PL 166

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIV-KRTRIINSM 152
           P           +++ R+LDL  +   +     R +++  +
Sbjct: 167 PDKFHGLTDTEAKYRKRYLDLIVNEETRKTFEIRAQVVAGI 207


>gi|331660735|ref|ZP_08361667.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA206]
 gi|315297600|gb|EFU56877.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 16-3]
 gi|331051777|gb|EGI23816.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA206]
          Length = 325

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNP-EFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 134 LLQQVLD 140



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 201 EPNIGKEKPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDARE 257

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +             L  A + GMP   G+A G+DR+VML LGA+ + EV
Sbjct: 258 QQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEV 317

Query: 560 SLF 562
             F
Sbjct: 318 IAF 320


>gi|258566275|ref|XP_002583882.1| hypothetical protein UREG_06849 [Uncinocarpus reesii 1704]
 gi|237907583|gb|EEP81984.1| hypothetical protein UREG_06849 [Uncinocarpus reesii 1704]
          Length = 392

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 51/157 (32%), Gaps = 34/157 (21%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNG-FEIA 492
             +I D+P        K +     PF M          +D        +DL+     E+ 
Sbjct: 249 PIFITDYP--------KHLK----PFYM--PPSTGSSADDPRKETVACFDLILPEVCEVV 294

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENR-------------------FGGLYRAFQCGM 533
            G +R H  E +L+     G+ +   +                             + G 
Sbjct: 295 GGSLREHRLEQLLRNMRERGMLQGRADETPASPEMTYPYLEPNEDLGTLQWYADLRRWGS 354

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            PHGG   G DR++  L G  +VR+V  FP      D
Sbjct: 355 APHGGFGLGFDRLLSYLAGVPSVRDVVPFPRYFGRAD 391



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 12/113 (10%)

Query: 163 ECSTPILTASSPEGARDFLVPS------RVNQGSFYALPQ----APQQYKQLLMASGFDR 212
           +   P++T+S  EGA      S      +  Q  ++  P+    + Q + +   A+    
Sbjct: 46  QVQPPLITSSDCEGAGQVFKVSPREIAAQEEQIEYFRSPKYLTVSSQLHLE-AYAAELGN 104

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD-ILNTMENVLRGVFEEF 264
            + ++P FR E   + R   EFY L+ E++FV+  D + + +E  +R + +  
Sbjct: 105 VWTLSPTFRAEKSDTPRHLSEFYMLEAELNFVDDLDKLTSFVEFFIRKLTQRL 157


>gi|152994944|ref|YP_001339779.1| lysyl-tRNA synthetase-like protein GenX [Marinomonas sp. MWYL1]
 gi|150835868|gb|ABR69844.1| lysyl-tRNA synthetase-related protein GenX [Marinomonas sp. MWYL1]
          Length = 320

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 93/292 (31%), Gaps = 21/292 (7%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF--YALPQAPQQ 200
           KR +++ ++R        +E  T  L+  S  +   + L     +QG    Y L  +P+ 
Sbjct: 13  KRAQLLKAIRAFFDTREVMEVDTQCLSLGSITDPHIEVLTSKTRSQGEDLIYYLQTSPEF 72

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
             + L+ +G    +Q+   FR E+    R   EF  L+      +   +++ ++++L+ +
Sbjct: 73  AMKRLLCAGSGSIYQLGKVFRAEEIG-RRHSIEFTMLEWYRVGFDHWQLMDEIQDLLKEL 131

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
             + S          R+ Y  A  R+    P       +            +   +   +
Sbjct: 132 LNDASLTC------ERLSYQMAFLRHTGLDPFTATLFQLQECAHQHTEYGLQEDDRDTLL 185

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLN 380
              +     PA G             +  S      A      DE G +           
Sbjct: 186 ELLFSSVVEPAIGKYVPC--------FIHSYPASQAALAKTHRDEKGLLVAARFELYWQG 237

Query: 381 IVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA---DARNHIAQELGIINC 429
           +          D ++    F    +  K    A    D R   A E G+ +C
Sbjct: 238 MELANGYHELTDAKEQARRFAEDKETRKQMRLANRQFDERLITALENGLPDC 289



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 52/110 (47%), Gaps = 4/110 (3%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           + +   Q  +     ++   + A +++L   G E+A+G      ++   + F+    +++
Sbjct: 206 HSYPASQAALAKTHRDEKGLLVAARFELYWQGMELANGYHELTDAKEQARRFAEDKETRK 265

Query: 517 VVE---NRFGG-LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +     +F   L  A + G+P   G+A G+DR++ML+    ++ EV  F
Sbjct: 266 QMRLANRQFDERLITALENGLPDCAGVALGVDRLLMLICHKSHIAEVLPF 315


>gi|209363652|ref|YP_001423482.2| hypothetical protein CBUD_0046 [Coxiella burnetii Dugway 5J108-111]
 gi|207081585|gb|ABS77687.2| hypothetical protein CBUD_0046 [Coxiella burnetii Dugway 5J108-111]
          Length = 343

 Score = 77.8 bits (190), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 76/192 (39%), Gaps = 5/192 (2%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVN--QGSFYALPQA 197
           N   R +++  +R        +E  TPIL+  +      D    + +N  +   Y L  +
Sbjct: 36  NQRLRAQLLRDIRQFFAERKVMEVETPILSQHTVTDIHIDSFQTTYLNGKEKQHYYLQTS 95

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+   + L+++G    +QI   FR+ +  S   P EF  L+         D+++ M+ +L
Sbjct: 96  PEYAMKRLLSAGSGPIYQICKAFRNGESGSQHNP-EFSMLEWYRPDFSCHDLMDEMDELL 154

Query: 258 RGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           + + + + ++  T    FL+    +  +        L N   + N TE+   +    F  
Sbjct: 155 QFILQSKKASRITYEELFLKHLGINPHQISLHQLQSLANQFSLENSTEYNDRNTLLQFLF 214

Query: 317 ILSVNPGYEVWA 328
              + P     A
Sbjct: 215 SECLEPKIGFDA 226



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 24/132 (18%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D P + +          H P T  Q  +  +   D     A ++++   G E A+G    
Sbjct: 225 DAPLFVY----------HFPAT--QAALSKINPQDPN--VALRFEVYIQGMECANGFEEL 270

Query: 499 HMSEVMLQAFSNVGISKEV-------VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             ++   Q F N    +         ++ RF     A   G+PP  G+A G+DR++M+  
Sbjct: 271 TNADEQRQRFLNDNTKRNQQNRPSINIDERF---LAALIHGLPPCAGVAVGLDRLIMIKA 327

Query: 552 GAKNVREVSLFP 563
             K + +V  FP
Sbjct: 328 ERKCIDDVINFP 339


>gi|323965545|gb|EGB60999.1| tRNA synthetase class II [Escherichia coli M863]
 gi|323975501|gb|EGB70602.1| tRNA synthetase class II [Escherichia coli TW10509]
 gi|327250099|gb|EGE61818.1| tRNA synthetases class II family protein [Escherichia coli STEC_7v]
          Length = 325

 Score = 77.8 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNP-EFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 134 LLQQVLD 140



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 201 EPNIGKEKPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDARE 257

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +             L  A + GMP   G+A G+DR+VML LGA+ + EV
Sbjct: 258 QQQRFEQDNRKRAARGLPQHPIDENLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEV 317

Query: 560 SLF 562
             F
Sbjct: 318 IAF 320


>gi|170766763|ref|ZP_02901216.1| lysyl-tRNA synthetase homolog GenX [Escherichia albertii TW07627]
 gi|170124201|gb|EDS93132.1| lysyl-tRNA synthetase homolog GenX [Escherichia albertii TW07627]
          Length = 325

 Score = 77.8 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNP-EFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 134 LLQQVLD 140



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 201 EPNIGKEKPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDAHE 257

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +             L  A + GMP   G+A G+DR+VML LGA+ + EV
Sbjct: 258 QQQRFEQDNRKRAARGLPQHPIDKNLIDALEVGMPDCSGVALGVDRLVMLALGAETLAEV 317

Query: 560 SLF 562
             F
Sbjct: 318 IAF 320


>gi|29655104|ref|NP_820796.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|153206255|ref|ZP_01945518.1| lysyl-tRNA synthetase homolog GenX [Coxiella burnetii 'MSU Goat
           Q177']
 gi|161830704|ref|YP_001597640.1| lysyl-tRNA synthetase homolog GenX [Coxiella burnetii RSA 331]
 gi|165918240|ref|ZP_02218326.1| lysyl-tRNA synthetase homolog GenX [Coxiella burnetii RSA 334]
 gi|212211847|ref|YP_002302783.1| lysyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212217792|ref|YP_002304579.1| lysyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|29542373|gb|AAO91310.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|120577385|gb|EAX34009.1| lysyl-tRNA synthetase homolog GenX [Coxiella burnetii 'MSU Goat
           Q177']
 gi|161762571|gb|ABX78213.1| lysyl-tRNA synthetase homolog GenX [Coxiella burnetii RSA 331]
 gi|165918100|gb|EDR36704.1| lysyl-tRNA synthetase homolog GenX [Coxiella burnetii RSA 334]
 gi|212010257|gb|ACJ17638.1| lysyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212012054|gb|ACJ19434.1| lysyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 321

 Score = 77.8 bits (190), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 75/188 (39%), Gaps = 5/188 (2%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVN--QGSFYALPQA 197
           N   R +++  +R        +E  TPIL+  +      D    + +N  +   Y L  +
Sbjct: 14  NQRLRAQLLRDIRQFFAERKVMEVETPILSQHTVTDIHIDSFQTTYLNGKEKQHYYLQTS 73

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+   + L+++G    +QI   FR+ +  S   P EF  L+         D+++ M+ +L
Sbjct: 74  PEYAMKRLLSAGSGPIYQICKAFRNGESGSQHNP-EFSMLEWYRPDFSCHDLMDEMDELL 132

Query: 258 RGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
           + + + + ++  T    FL+    +  +        L N   + N TE+   +    F  
Sbjct: 133 QFILQSKKASRITYEELFLKHLGINPHQISLHQLQSLANQFSLENSTEYNDRNTLLQFLF 192

Query: 317 ILSVNPGY 324
              + P  
Sbjct: 193 SECLEPKI 200



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 24/132 (18%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D P + +          H P T  Q  +  +   D     A ++++   G E A+G    
Sbjct: 203 DAPLFVY----------HFPAT--QAALSKINPQDPN--VALRFEVYIQGMECANGFEEL 248

Query: 499 HMSEVMLQAFSNVGISKEV-------VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
             ++   Q F N    +         ++ RF     A   G+PP  G+A G+DR++M+  
Sbjct: 249 TNADEQRQRFLNDNTKRNQQNRPSINIDERF---LAALIHGLPPCAGVAVGLDRLIMIKA 305

Query: 552 GAKNVREVSLFP 563
             K + +V  FP
Sbjct: 306 ERKCIDDVINFP 317


>gi|294881737|ref|XP_002769472.1| Lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239872931|gb|EER02190.1| Lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 388

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 10/116 (8%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQ 530
                 +++    G EI +     +     L  F+    +K   ++       G   A +
Sbjct: 279 KPGLTERFEGFVMGKEICNAYTELNDPVKQLACFTAQAQAKAAGDDEACDVDNGFVTALE 338

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRE 586
            G+PP GG   G+DR+ M L    N++EV L+P        ++  P+    EQ  E
Sbjct: 339 YGLPPTGGWGLGVDRLCMFLTDNINIKEVILYP----AMKPIVNKPAE--DEQKEE 388


>gi|28899612|ref|NP_799217.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153838013|ref|ZP_01990680.1| putative lysyl-tRNA synthetase homolog GenX [Vibrio
           parahaemolyticus AQ3810]
 gi|260361270|ref|ZP_05774378.1| lysine--tRNA ligase-like protein GenX [Vibrio parahaemolyticus
           K5030]
 gi|260876646|ref|ZP_05889001.1| lysyl-tRNA synthetase-like protein GenX [Vibrio parahaemolyticus
           AN-5034]
 gi|260898086|ref|ZP_05906582.1| lysine--tRNA ligase family protein GenX [Vibrio parahaemolyticus
           Peru-466]
 gi|260902325|ref|ZP_05910720.1| lysine--tRNA ligase-like protein GenX [Vibrio parahaemolyticus
           AQ4037]
 gi|33301719|sp|Q87KY6|SYK3_VIBPA RecName: Full=Uncharacterized protein YjeA
 gi|28807864|dbj|BAC61101.1| lysyl-tRNA synthetase-related protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149748621|gb|EDM59480.1| putative lysyl-tRNA synthetase homolog GenX [Vibrio
           parahaemolyticus AQ3810]
 gi|308085815|gb|EFO35510.1| lysine--tRNA ligase family protein GenX [Vibrio parahaemolyticus
           Peru-466]
 gi|308094021|gb|EFO43716.1| lysyl-tRNA synthetase-like protein GenX [Vibrio parahaemolyticus
           AN-5034]
 gi|308110944|gb|EFO48484.1| lysine--tRNA ligase-like protein GenX [Vibrio parahaemolyticus
           AQ4037]
 gi|308114249|gb|EFO51789.1| lysine--tRNA ligase-like protein GenX [Vibrio parahaemolyticus
           K5030]
 gi|328472261|gb|EGF43131.1| poxB regulator PoxA [Vibrio parahaemolyticus 10329]
          Length = 323

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 63/157 (40%), Gaps = 16/157 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYAL 194
            + +R  +I ++R        +E  TP ++ ++           +F+ P   +    + +
Sbjct: 13  QLRQRATLIAAIRQFFAERQVMEVDTPAMSHATVTDIHLHTFQTEFVGPGYADGSKLFFM 72

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +QI   FR+E+      P EF  L+      +   +++ M+
Sbjct: 73  -TSPEFHMKRLLAAGSGCIYQINKAFRNEENGRYHNP-EFTMLEWYRVGFDHHKLMDEMD 130

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           ++L+ V +             R+ Y  A        P
Sbjct: 131 DLLQLVLK--------CGAAQRMTYQQAFIDVLGVCP 159



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 74/234 (31%), Gaps = 37/234 (15%)

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
           G  +    D M++         L  +  +   +  +         L +   E     L  
Sbjct: 119 GFDHHKLMDEMDD---------LLQLVLKCGAAQRMTYQQAFIDVLGVCPLEGSMTELKA 169

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
                      +P +           +  E   I  +     ++ DFP            
Sbjct: 170 AASKLGLSDIAEPEEDRDTLLQLLFSVGVE-NKIGQDV--PAFVYDFP------------ 214

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
                    Q  +  +   D     A ++++   G E+A+G       +  L  F     
Sbjct: 215 -------ASQAALAKINPQDHR--VADRFEVYFKGIELANGFHELDNPKEQLARFEQDNA 265

Query: 514 SKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  +    +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 266 KRIEMGLKPQPIDYHLISALEAGLPDCAGVALGIDRLIMLALGCDHIDQVTAFP 319


>gi|215447936|ref|ZP_03434688.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289759756|ref|ZP_06519134.1| lysyl-tRNA synthetase 1 lyss [Mycobacterium tuberculosis T85]
 gi|289715320|gb|EFD79332.1| lysyl-tRNA synthetase 1 lyss [Mycobacterium tuberculosis T85]
          Length = 249

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 26/135 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              ++ DFP                P T     +              ++DL   G E+A
Sbjct: 130 APTFVKDFP------------VQTTPLTRQHRSIP---------GVTEKWDLYLRGIELA 168

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G        V  + F++   +    ++           A + GMPP  G   GIDR++M
Sbjct: 169 TGYSELSDPVVQRERFADQARAAAAGDDETMVLDEDFLAALEYGMPPCTGTGMGIDRLLM 228

Query: 549 LLLGAKNVREVSLFP 563
            L G  ++RE  LFP
Sbjct: 229 SLTGL-SIRETVLFP 242


>gi|187731320|ref|YP_001882806.1| lysyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|187428312|gb|ACD07586.1| lysyl-tRNA synthetase [Shigella boydii CDC 3083-94]
          Length = 77

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 3/79 (3%)

Query: 162 IECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
           +E  TP++        AR F+          Y L  AP+ Y + L+  GF+R F+I   F
Sbjct: 1   MEVETPMMQVIPGGASARPFITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNF 59

Query: 221 RDEDPRSDRLPGEFYQLDM 239
           R+E   S R   EF  +++
Sbjct: 60  RNEGI-SVRHNPEFTMMEL 77


>gi|126666940|ref|ZP_01737916.1| lysyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126628656|gb|EAZ99277.1| lysyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 322

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 4/91 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCG 532
             A +++L  NG E+ +G      ++   + F+     ++        +      A   G
Sbjct: 228 AVAHRFELYINGLELCNGYWELTDADEQRRRFAADNRLRQARGQAAMEQDDAFLAAMDSG 287

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +P   G+A G+DR++ML LGA ++ EV  FP
Sbjct: 288 LPDCAGVALGLDRLLMLKLGASSIDEVLAFP 318



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 62/171 (36%), Gaps = 25/171 (14%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA----- 193
            + +  R + ++ +R        +E  TP+L        R  +    ++  +        
Sbjct: 13  SRALKSRAQQLSFVRGFFAQRQVLEVETPVL-------GRCGVTDPNLSSIAARVSAAGR 65

Query: 194 ----LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  +P+ + + L+A+G    +Q+   FRD + R  R   EF  L+      +   +
Sbjct: 66  QGGWLQTSPEYHMKRLLAAGCGDIYQVTKVFRDGE-RGRRHNPEFSMLEWYRCGFDDQTL 124

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMH 300
           +N + +++                   + Y +A+RR+    P       +H
Sbjct: 125 MNEVADLVCS--------WLDCLRPHTLSYREALRRWAHIDPFTCTDAQLH 167


>gi|14520464|ref|NP_125939.1| asparagine synthetase A [Pyrococcus abyssi GE5]
 gi|5457679|emb|CAB49170.1| asnS-like asparaginyl-tRNA synthetase related protein [Pyrococcus
           abyssi GE5]
          Length = 294

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 93/238 (39%), Gaps = 19/238 (7%)

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS----PEGARDFLVPSRVN- 187
           +    ++K I  +T+I++ M        F      +L+  +    P+ A + + P+ V+ 
Sbjct: 6   IISRDIYKAIDIQTKILDYMTKFFTDRGFKWLLPIMLSPITDPLWPDPAGEGIRPAEVDV 65

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDMEMSFVE 245
            G    L  +   +KQL +A G ++ F ++P  R E  R D  R   EF QLD E+   +
Sbjct: 66  YGVRMRLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAK 125

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVS----NNFLRICYDDAIRRYGTDKP---DLRNPII 298
             D++  +E ++ G+F +             +F    Y D +  +G+D+    ++  P  
Sbjct: 126 MKDVMRLIEELIYGLFRKAEEWTGREFPRARHFKVYDYKDILEEFGSDEKASMEMEEPFW 185

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGL 356
           + N+   F   E     K   +   Y    + + G            +        GL
Sbjct: 186 IVNIPREFYDREENGVWKNYDLILPYGYGEVSSGGEREW-----EYEKIVAKIRAAGL 238



 Score = 46.6 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 9/126 (7%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV--CNGFEIASGGIRNH 499
             E+  +EK       PF +     E     +    K   YDL+      E++SGG R  
Sbjct: 167 LEEFGSDEKASMEMEEPFWIVNIPREFYDREENGVWK--NYDLILPYGYGEVSSGGEREW 224

Query: 500 MSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG-MPPHGGIAAGIDRIVMLLLGAKNVRE 558
             E ++      G+     E+ F       + G + P  G   G++R+V  ++GAK++ E
Sbjct: 225 EYEKIVAKIRAAGLK----EDSFRPYLEIARAGKLKPSAGAGIGVERLVRFIVGAKHIAE 280

Query: 559 VSLFPM 564
           V  FP 
Sbjct: 281 VQPFPR 286


>gi|215447937|ref|ZP_03434689.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289759757|ref|ZP_06519135.1| lysyl-tRNA synthetase 1 lyss [Mycobacterium tuberculosis T85]
 gi|289715321|gb|EFD79333.1| lysyl-tRNA synthetase 1 lyss [Mycobacterium tuberculosis T85]
          Length = 171

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 16/141 (11%)

Query: 5   RTHSCGDLGVSDVG--------SFVRLSGWVHRVRPHGGIIFLDIRDHYGIT-QVVANPD 55
           RTH+  ++  +             V ++G V   R  G + F  ++D  G   QV+ + D
Sbjct: 38  RTHTLAEVRAAHPDLPIDTATEDIVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLD 97

Query: 56  SACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVF 115
                   + +++  L   G ++      I++    G++ + A    I   A+ L     
Sbjct: 98  KVGQAALDAWKADVDL---GDIVYVHGAVISSR--RGELSVLADCWRI--AAKSLRPLPV 150

Query: 116 GEREYPESIRFKYRFLDLRRD 136
             +E  E  R + R++DL  D
Sbjct: 151 AHKEMSEESRVRQRYVDLIVD 171


>gi|188535095|ref|YP_001908892.1| lysyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238689686|sp|B2VCV6|SYK3_ERWT9 RecName: Full=Uncharacterized protein YjeA
 gi|188030137|emb|CAO98023.1| Putative lysyl-tRNA synthetase (Lysine-tRNA ligase) [Erwinia
           tasmaniensis Et1/99]
          Length = 325

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++      F   +R        G    L
Sbjct: 14  ANLLKRAAIMAEIRRFFADRGVLEVETPAMSQATVTDVHLFPFQTRFVGPGAAAGIDLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQLCRSFRNEEMG-RHHNPEFTMLEWYRPHYDMYRLINEVD 132

Query: 255 NVLRGVFE 262
           ++L+ V E
Sbjct: 133 DLLQQVLE 140



 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E    ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      S  
Sbjct: 201 EPEIGKEKPAFVYH-FPATQAALAEISPEDHR--VAERFEVYFKGIELANGFRELTDSRE 257

Query: 504 MLQAFSNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +       +     L  A   GMP   G+A G+DR+VML L A+ + +V
Sbjct: 258 QRQRFEQDNRKRAAAGLPQQPIDTYLLDALSAGMPESSGVALGVDRLVMLALKAEQLSDV 317

Query: 560 SLF 562
             F
Sbjct: 318 IAF 320


>gi|315617570|gb|EFU98176.1| tRNA synthetase class II family protein [Escherichia coli 3431]
          Length = 325

 Score = 77.4 bits (189), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R      +QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLVAGCGPVFQLCRSFRNEEIGRYHNP-EFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V +
Sbjct: 134 LLQQVLD 140



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 201 EPNIGKEKPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDAHE 257

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +             L  A + GMP   G+A G+DR+VML LGA+ + EV
Sbjct: 258 QQQRFEQDNRKRAARGLPQHPIDKNLIDALEVGMPDCSGVALGVDRLVMLALGAETLAEV 317

Query: 560 SLF 562
             F
Sbjct: 318 IAF 320


>gi|300715029|ref|YP_003739832.1| lysyl-tRNA synthetase (Lysine-tRNA ligase) [Erwinia billingiae
           Eb661]
 gi|299060865|emb|CAX57972.1| lysyl-tRNA synthetase (Lysine-tRNA ligase) [Erwinia billingiae
           Eb661]
          Length = 325

 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALP 195
           N++KR  I+  +R        +E  TP ++ ++          +R       QG    L 
Sbjct: 15  NLLKRAAIMAEIRRFFADRGVLEVETPAMSQATVTDVHLVPFQTRFVGPGAAQGLDLYLM 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+        EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGSGPIFQLCRSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMNEVDD 133

Query: 256 VLRGVFE 262
           +L+ V E
Sbjct: 134 LLQQVLE 140



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G      S    Q F    
Sbjct: 210 AFVYH-FPASQASLAEISTEDHR--VAERFEVYFKGIELANGFRELTDSREQKQRFDQDN 266

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             +       +     L  A   GMP   G+A G+DRIVML L A ++ EV  FP+ +
Sbjct: 267 RKRAASGLPQQPIDTNLLDALAHGMPDCSGVALGVDRIVMLALKADSLSEVIAFPVDR 324


>gi|189191506|ref|XP_001932092.1| asparaginyl-tRNA synthetase [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187973698|gb|EDU41197.1| asparaginyl-tRNA synthetase [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 265

 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 51/137 (37%), Gaps = 17/137 (12%)

Query: 163 ECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRD 222
           + S P L  +  EG          N+ ++  L Q+ Q Y +  + S     + I   FR 
Sbjct: 5   KVSPPALVQTQVEGGATLFKFGYYNEEAY--LTQSSQLYLETCLPS-MGDVYCIEKSFRA 61

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDIL----NTMENVL----------RGVFEEFSNGN 268
           E   + R   E+  ++ E+ ++  DD+L      M  VL          + + +      
Sbjct: 62  EKSLTRRHLAEYTHIEAELDYINFDDLLTHLEEVMCRVLEVTMADPVVKQYIMDLNPEFQ 121

Query: 269 TVSNNFLRICYDDAIRR 285
                F R+ Y DAI  
Sbjct: 122 LPERPFKRMKYQDAIDW 138


>gi|218781608|ref|YP_002432926.1| tRNA synthetase class II (D K and N) [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762992|gb|ACL05458.1| tRNA synthetase class II (D K and N) [Desulfatibacillum
           alkenivorans AK-01]
          Length = 299

 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 76/209 (36%), Gaps = 10/209 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQAP 198
           K +  R  ++  +R    ++ F++  TPI + A  PE                + L  +P
Sbjct: 5   KQLQIRADLLFHIRRFFRSQGFLDVETPIRIPAPIPEA------HIDAVPSLDWYLHTSP 58

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L++ G+++ FQI   FR E+  + R   EF  L+   +  + + ++   EN+L 
Sbjct: 59  ESCMKRLLSQGYEKIFQICRVFRAEELGA-RHLPEFTMLEWYRTDADYNQLMTDCENLLA 117

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN-PIIMHNVTEHFVHSEFRVFSKI 317
              E   +   +     RI    + RR        +   +      E     E   F   
Sbjct: 118 FCLESMPDRAPLVYQGKRIDASPSWRRESVSDAFRKYAGMSAEEALETDRFDEVMAFMVE 177

Query: 318 LSVN-PGYEVWAIPAKGGGGNRAFCDRMN 345
            ++      ++  P +     R   +  N
Sbjct: 178 PALGLDPVFLYDYPIQKAALARPKPEDPN 206



 Score = 61.2 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 13/100 (13%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG-------ISKEVVENRF 522
           K  D     A +++L   G E+A+         V  + F                   +F
Sbjct: 201 KPEDPN--LAERFELYIGGMEMANAFSELVDPVVQAERFKMEEEERVLAGKKPYPSNEKF 258

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                     MPP  GIA G+DR+ ML  GA ++ ++S F
Sbjct: 259 LCALET----MPPSAGIALGVDRLAMLFAGAADIAQISAF 294


>gi|84386961|ref|ZP_00989985.1| lysyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84378251|gb|EAP95110.1| lysyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 323

 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 16/158 (10%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYA 193
           K + +R  I+N +R   I  N +E  TP ++ ++           +F+ P   + G    
Sbjct: 12  KQLKQRADILNQIRQFFIERNVMEVDTPAMSHATVTDVHLHTFKTEFVGPGYAH-GQPLF 70

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
              +P+ + + L+A+G    +QI   FR+E+      P EF  L+      +  D+++ M
Sbjct: 71  FMTSPEFHMKRLLAAGSGCIYQICKSFRNEENGRYHNP-EFTMLEWYRVGFDHHDLMDEM 129

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           + +L+ V +        S +  R+ Y  A        P
Sbjct: 130 DLLLQQVLK--------SGSAQRMTYQQAFIDVLGVCP 159



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +  ND     A ++++   G E+A+G       +  LQ F      +  +
Sbjct: 213 FPASQAALAKINPNDPR--VADRFEVYFKGIELANGFHELDKPQEQLQRFEGDNAKRIEM 270

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 271 GLSPQPIDHHLIEALKAGLPDCAGVALGIDRLIMLALGYDHIDDVTAFP 319


>gi|118580184|ref|YP_901434.1| tRNA synthetase, class II (D, K and N) [Pelobacter propionicus DSM
           2379]
 gi|118502894|gb|ABK99376.1| tRNA synthetase, class II (D, K and N) [Pelobacter propionicus DSM
           2379]
          Length = 301

 Score = 77.4 bits (189), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 8/123 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAP 198
            N+  R  I+ ++R    +  F+E  TP L  + +PE   +++ P     G  Y L  +P
Sbjct: 6   HNLYLRADIVAAIRSFFASRRFLEVDTPHLIPANAPE---EYIDPH--GSGDRY-LHTSP 59

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L+  G +R FQI  C+R ++  S R   EF  L+      +   ++   + +LR
Sbjct: 60  EICMKRLLCRGHERIFQICRCWRRDERGS-RHLPEFAMLEWYRRDSDYRQLMEDCQELLR 118

Query: 259 GVF 261
            V 
Sbjct: 119 WVA 121



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 5/107 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +      +  LK +D     A +++L   G E+A+G    +      Q F      +   
Sbjct: 192 YPAEMASLARLKADD--ESVAERFELYLGGLELANGFSELNDPREQRQRFLVANERRIEA 249

Query: 519 ENRFGGLYRAFQ---CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                 L   F      +PP  GIA GIDR+VML   A  + +V  F
Sbjct: 250 GLSPLPLPEPFLDELASLPPSAGIALGIDRLVMLFADAPRIDDVISF 296


>gi|218708311|ref|YP_002415932.1| lysyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782467|sp|B7VHR8|SYK3_VIBSL RecName: Full=Uncharacterized protein YjeA
 gi|218321330|emb|CAV17280.1| putative lysyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 323

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 16/158 (10%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYA 193
           K + +R  I+N +R   +  N +E  TP ++ ++           +F+ P   + G    
Sbjct: 12  KQLKQRADILNQIRQFFVERNVMEVDTPAMSHATVTDVHLHTFKTEFVGPGYAH-GQPLF 70

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
              +P+ + + L+A+G    +QI   FR+E+      P EF  L+      +  D+++ M
Sbjct: 71  FMTSPEFHMKRLLAAGSGCIYQICKSFRNEENGRYHNP-EFTMLEWYRVGFDHHDLMDEM 129

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           + +L+ V +        S    R+ Y  A        P
Sbjct: 130 DLLLQQVLK--------SGTAERMTYQQAFIDVLGVCP 159



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +  ND     A ++++   G E+A+G       +  L+ F +    +  +
Sbjct: 213 FPASQAALAKINPNDSR--VADRFEVYFKGIELANGFHELDKPQEQLKRFEDDNTKRIEM 270

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 271 GLSPQPIDHHLIEALKAGLPDCAGVALGIDRLIMLALGYDHIDDVTAFP 319


>gi|86147217|ref|ZP_01065532.1| lysyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85834932|gb|EAQ53075.1| lysyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 323

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 16/158 (10%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYA 193
           K + +R  I+N +R   +  N +E  TP ++ ++           +F+ P   + G    
Sbjct: 12  KQLKQRADILNQIRQFFVERNVMEVDTPAMSHATVTDVHLHTFKTEFVGPGYAH-GQPLF 70

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
              +P+ + + L+A+G    +QI   FR+E+      P EF  L+      +  D+++ M
Sbjct: 71  FMTSPEFHMKRLLAAGSGCIYQICKSFRNEENGRYHNP-EFTMLEWYRVGFDHHDLMDEM 129

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           + +L+ V +        S    R+ Y  A        P
Sbjct: 130 DLLLQQVLK--------SGIAERMTYQQAFIDVLGVCP 159



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +  ND     A ++++   G E+A+G       +  L+ F +    +  +
Sbjct: 213 FPASQAALAKINPNDSR--VADRFEVYFKGIELANGFHELDKPQEQLKRFEDDNAKRIEM 270

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 271 GLSPQPIDHHLIEALKAGLPDCAGVALGIDRLIMLALGYDHIDDVTAFP 319


>gi|292489634|ref|YP_003532524.1| putative lysyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292898150|ref|YP_003537519.1| lysyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291197998|emb|CBJ45100.1| putative lysyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291555071|emb|CBA23169.1| putative lysyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|312173810|emb|CBX82064.1| putative lysyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 325

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 57/128 (44%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++      F   +R        G    L
Sbjct: 14  ANLLKRATILAEIRRFFADRGVLEVETPAMSQATVTDVHLFPFQTRFVGPGAAAGVDLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQLCRSFRNEEMGRYHNP-EFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE 262
           ++L+ V E
Sbjct: 133 DLLQQVLE 140



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 19/161 (11%)

Query: 414 ADARNHIAQELGIIN--------CNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGG 465
           A  R  +A++LG  +            +  +++     E    ++K  F ++ F   Q  
Sbjct: 167 AQLR-EVAEKLGAADLANREEDRDTLLQLLFVLG---VEPEIGKEKPAFVYH-FPASQAA 221

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENR 521
           +  +   D     A ++++   G E+A+G      S    Q F      + V     +  
Sbjct: 222 LAEISPEDHR--VAERFEVYFKGIELANGFRELTDSREQRQRFEQDNHKRAVAGLPQQPI 279

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              L  A   GMP   G+A G+DR+VML L A+ + +V  F
Sbjct: 280 DTYLLDALAEGMPQSSGVALGVDRLVMLALKAERLSDVIAF 320


>gi|218512516|ref|ZP_03509356.1| aspartyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 42

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 27/41 (65%), Positives = 35/41 (85%)

Query: 1  MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDI 41
          MHRYR+H+C  L  +DVGS VR+SGWVHRVR HGG++F+D+
Sbjct: 1  MHRYRSHTCAALRKTDVGSTVRISGWVHRVRDHGGVLFIDL 41


>gi|156042712|ref|XP_001587913.1| hypothetical protein SS1G_11155 [Sclerotinia sclerotiorum 1980]
 gi|154695540|gb|EDN95278.1| hypothetical protein SS1G_11155 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 279

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 64/180 (35%), Gaps = 27/180 (15%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL-VCNGFEI 491
              ++ D+P                PF M         G    S     +DL V    EI
Sbjct: 105 SPVFVTDYP------------KPIKPFYMLPSEN---SGEGKTSETVQCFDLLVPEVCEI 149

Query: 492 ASGGIRNHM-SEVMLQAFSNVGISKEVVENRFG---GLYRAFQCGMPPHGGIAAGIDRIV 547
             G +R +   E++    +N  +  +  E  FG         + G  PHGG   G DR++
Sbjct: 150 VGGSMREYRLPELISAMRANGMVRGDAGEEDFGSLKWYTELRRWGSVPHGGFGLGFDRLL 209

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISVTTIL 607
             L G +N+RE+  FP   +   +       V      +LG+R      +  K ++   +
Sbjct: 210 GYLAGVQNIREIVTFPRWHSGFKM------KVDTN-WDQLGIRHSPKGIRSTKSTIEADI 262


>gi|291615961|ref|YP_003518703.1| PoxA [Pantoea ananatis LMG 20103]
 gi|291150991|gb|ADD75575.1| PoxA [Pantoea ananatis LMG 20103]
          Length = 349

 Score = 77.0 bits (188), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 58/128 (45%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  II  +R        +E  TP ++ ++          +R      ++G    L
Sbjct: 38  ANLIKRAAIIAEVRRFFADRGVLEVDTPAMSQATITDIHLVPFQTRFVGPGLSEGRDLWL 97

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 98  MTSPEYHMKRLLAAGSGPIYQMGRSFRNEEAGRYHNP-EFTMLEWYRPHYDMYRLMNEVD 156

Query: 255 NVLRGVFE 262
           ++L+ V E
Sbjct: 157 DLLQQVLE 164



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 67/193 (34%), Gaps = 35/193 (18%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCF-FIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
           L+    +       + +G+        D L    F       I Q+         + C+I
Sbjct: 186 LSADKAQLREAAEKLGEGELASREEDRDTLLMLLFMLGVEPKIGQD---------KPCFI 236

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
             FP                     Q  +  +   D     A ++++   G E+A+G   
Sbjct: 237 YHFP-------------------ASQAALAEISTEDHR--VAERFEVYYKGIELANGFRE 275

Query: 498 NHMSEVMLQAFSNVGISKEVV---ENRFGGLY-RAFQCGMPPHGGIAAGIDRIVMLLLGA 553
              S    Q F      +      ++        A + GMP   G+A G+DR++ML L A
Sbjct: 276 LTDSREQRQRFEQDNRRRAARGLPQHPIDHYLLAALEHGMPACSGVALGVDRLIMLALKA 335

Query: 554 KNVREVSLFPMSQ 566
           +++ EV  FP+ +
Sbjct: 336 ESLSEVIAFPVDR 348


>gi|56758450|gb|AAW27365.1| SJCHGC03318 protein [Schistosoma japonicum]
          Length = 185

 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 4/81 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDR 545
           E+ +     +   +  + F      K   +            A   G+PP  G   GIDR
Sbjct: 5   ELCNAYTELNDPVIQRERFMEQAKDKAAGDTEAMVTDEQFLTALGYGLPPTAGWGLGIDR 64

Query: 546 IVMLLLGAKNVREVSLFPMSQ 566
           + M L    N++EV LFP  +
Sbjct: 65  LTMFLTNTNNIKEVILFPAMK 85


>gi|317493558|ref|ZP_07951979.1| tRNA synthetase class II [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918501|gb|EFV39839.1| tRNA synthetase class II [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 325

 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 57/128 (44%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I++++R        +E  TP ++ ++          +        QG    +
Sbjct: 14  ANLLKRATIMSTIRRFFSDRGVLEVDTPAMSQATVTDIHLVPFQTHFVGPGAAQGMTLYM 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQLGKSFRNEESG-RHHNPEFSMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE 262
           ++L+ V E
Sbjct: 133 DLLQQVLE 140



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 7/127 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N    K  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 201 EPNIGRDKPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDARE 257

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
               F      +             L  A + G+P   G+A G+DR++ML L A+ + EV
Sbjct: 258 QRMRFEQDNRKRAALGLPQHPLDENLLAALEHGLPDCSGVALGVDRLIMLALKAERLSEV 317

Query: 560 SLFPMSQ 566
             FP+ +
Sbjct: 318 IAFPVDR 324


>gi|238897703|ref|YP_002923382.1| putative lysyl-tRNA synthetase with Class II aaRS and biotin
           synthetase domains [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259511523|sp|C4K3U1|SYK3_HAMD5 RecName: Full=Uncharacterized protein YjeA
 gi|229465460|gb|ACQ67234.1| putative lysyl-tRNA synthetase with Class II aaRS and biotin
           synthetase domains [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 325

 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 12/112 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG------ 512
           F   Q  + S+   D     A ++++   G E+A+G      S    Q F          
Sbjct: 215 FPASQAALASISTEDYR--VAERFEVYFKGIELANGFYELTDSAEQQQRFEQDNRQRAAL 272

Query: 513 -ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            + K  ++ RF     A + G+PP  G+A GIDR+VML + A+N+ EV  FP
Sbjct: 273 GLPKRSIDERF---IAALKHGLPPCSGVALGIDRLVMLSVNAENLSEVMAFP 321



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 56/126 (44%), Gaps = 6/126 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF-----YALP 195
           N++KR  +I  +R        +E  TP ++ ++          +R    +        + 
Sbjct: 15  NLLKRADMIKKIRQFFTDRGVLEVDTPCMSQATVTDVHLSTFETRFLAPTMAKSLSLYMT 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    +Q+  CFR+E+      P EF  L+      +   +++ +++
Sbjct: 75  TSPEYHMKRLLAAGSGPIYQMGRCFRNEEMGRYHNP-EFTLLEWYRPHYDMYRLMDEVDD 133

Query: 256 VLRGVF 261
           +L+ + 
Sbjct: 134 LLQQIL 139


>gi|91228401|ref|ZP_01262327.1| lysyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91188042|gb|EAS74348.1| lysyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 323

 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 63/157 (40%), Gaps = 16/157 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYAL 194
            + +R  +I S+R        +E  TP ++ ++           +F+ P   +    + +
Sbjct: 13  QLRQRATLIASIRQFFADRQVMEVDTPAMSHATVTDIHLHTFQTEFVGPGYADGSKLFFM 72

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +QI   FR+E+      P EF  L+      +   +++ M+
Sbjct: 73  -TSPEFHMKRLLAAGSGCIYQINKAFRNEENGRYHNP-EFTMLEWYRVGFDHHKLMDEMD 130

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           ++L+ V +             R+ Y  A        P
Sbjct: 131 DLLQLVLK--------CGAAQRMTYQQAFIDVLGVCP 159



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 74/234 (31%), Gaps = 37/234 (15%)

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
           G  +    D M++         L  +  +   +  +         L +   E     L  
Sbjct: 119 GFDHHKLMDEMDD---------LLQLVLKCGAAQRMTYQQAFIDVLGVCPLEGSMTELKA 169

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
                      +P +           +  E   I  +     ++ DFP            
Sbjct: 170 AASKLGLSDIAEPEEDRDTLLQLLFSVGVE-NKIGQDV--PAFVYDFP------------ 214

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
                    Q  +  +   D     A ++++   G E+A+G       +  L  F     
Sbjct: 215 -------ASQAALAKINPQDHR--VADRFEVYFKGIELANGFHELDNPKEQLARFEQDNA 265

Query: 514 SKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  +    +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 266 KRIEMGLKPQPIDYHLISALEAGLPDCAGVALGIDRLIMLALGCDHIDQVTAFP 319


>gi|297841895|ref|XP_002888829.1| hypothetical protein ARALYDRAFT_894970 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334670|gb|EFH65088.1| hypothetical protein ARALYDRAFT_894970 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 432

 Score = 77.0 bits (188), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    +V+ Q    + +  E  E          + 
Sbjct: 337 NDDEKTVAAMDVLVPKVGELIGGSQREERYDVIRQRIEEMRLPIEPYE----WYLDLRRY 392

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   H G   G +R++    G  N+R+V  FP      DL
Sbjct: 393 GTVKHCGFGLGFERMIQFATGIDNIRDVIPFPRYPGKADL 432



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 35/91 (38%)

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
            V + S         Q +    A      +   P FR E+  + R   EF+ ++ E++F 
Sbjct: 159 HVEERSRLNFLDGSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFA 218

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +  D +N  E  ++ +        +   +F+
Sbjct: 219 DIHDDMNCAEAYVKYMCNWLIKNCSDDMDFM 249



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 5/95 (5%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTL--HKNIVKRTRIINS 151
           IEL+ + +  +   +    P+   +  PE +R     L LR  T         R  +  +
Sbjct: 3   IELNVESVIDVGTVDPTKYPLPKTKLTPEFLRDL---LHLRSRTNLISAVARIRNALAFA 59

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
                    F+   TPI+T S  EGA +    + +
Sbjct: 60  THSFFQEHGFLYIHTPIITTSDCEGAGEMFQVTTL 94


>gi|56970503|gb|AAH88466.1| Nars2 protein [Rattus norvegicus]
          Length = 277

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 53/137 (38%), Gaps = 25/137 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             +++++P                PF M +         D  +  A   DL+  G  E+ 
Sbjct: 163 PVFVINYP------------SELKPFYMRENED------DPQNTVA-AVDLLVPGVGELF 203

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G +R     V+ Q  +  G++K      +       + G  PHGG   G +R +  +LG
Sbjct: 204 GGSLREERYHVLEQRLARSGLTKA-----YQWYLDLRKFGSVPHGGFGMGFERYLQCILG 258

Query: 553 AKNVREVSLFPMSQNFC 569
             N+++V  FP   + C
Sbjct: 259 VDNIKDVIPFPRFTHSC 275



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 1/92 (1%)

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
           +     N     A      Q    +M+  F + F   P FR E+ +S R   EFY ++ E
Sbjct: 3   IKVPEENFFDVPAFLTVSGQLHLEVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAE 62

Query: 241 MSFVEQ-DDILNTMENVLRGVFEEFSNGNTVS 271
           +SFVE   D++  ME + +   E   +     
Sbjct: 63  VSFVESLQDLMQVMEGLFKATTEMVLSHCPED 94


>gi|301118242|ref|XP_002906849.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262108198|gb|EEY66250.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 284

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)

Query: 160 NFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM-ASGFDRYFQIAP 218
           +++E  TP L   +     ++      +Q +  A  Q+PQ YK +    +  +R F+I P
Sbjct: 89  DYVEIHTPKLVGGASGSGANYFTLKYFDQDATLA--QSPQTYKHMACDVASLERVFEIGP 146

Query: 219 CFRDEDPRSDRLPGEFYQLDME 240
            FR E   ++R   E   LD+E
Sbjct: 147 GFRAETSNTNRHMRELVGLDLE 168



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 4/63 (6%)

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
                H  +++++    +G+ +  +         + +    PHGG   G++R+VML LG 
Sbjct: 205 PLAHVHDPKLLMERMDELGVPQVSM----CNYIYSLRLDSLPHGGGGIGLERVVMLYLGL 260

Query: 554 KNV 556
            N+
Sbjct: 261 GNI 263


>gi|254230269|ref|ZP_04923659.1| putative lysyl-tRNA synthetase homolog GenX [Vibrio sp. Ex25]
 gi|262393012|ref|YP_003284866.1| lysyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937206|gb|EDN56074.1| putative lysyl-tRNA synthetase homolog GenX [Vibrio sp. Ex25]
 gi|262336606|gb|ACY50401.1| lysyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 323

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 63/157 (40%), Gaps = 16/157 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYAL 194
            + +R  +I S+R        +E  TP ++ ++           +F+ P   +    + +
Sbjct: 13  QLRQRATLIASIRQFFADRQVMEVDTPAMSHATVTDIHLHTFQTEFVGPGYADGSKLFFM 72

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +QI   FR+E+      P EF  L+      +   +++ M+
Sbjct: 73  -TSPEFHMKRLLAAGSGCIYQINKAFRNEENGRYHNP-EFTMLEWYRVGFDHHKLMDEMD 130

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           ++L+ V +             R+ Y  A        P
Sbjct: 131 DLLQLVLK--------CGAAQRMTYQQAFIDVLGVCP 159



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 73/234 (31%), Gaps = 37/234 (15%)

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
           G  +    D M++         L  +  +   +  +         L +   E     L  
Sbjct: 119 GFDHHKLMDEMDD---------LLQLVLKCGAAQRMTYQQAFIDVLGVCPLEGSMTELKA 169

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
                      +P +           +  E  I         ++ DFP            
Sbjct: 170 AASKLGLSDIAEPEEDRDTLLQLLFSVGVEHKI---GQDVPAFVYDFP------------ 214

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
                    Q  +  +   D     A ++++   G E+A+G       +  L  F     
Sbjct: 215 -------ASQAALAKINPQDHR--VADRFEVYFKGVELANGFHELDNPKEQLARFEQDNA 265

Query: 514 SKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  +    +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 266 KRLDMGLKPQPIDYHLISALEAGLPDCAGVALGIDRLIMLALGCDHIDQVTAFP 319


>gi|21957329|gb|AAM84206.1|AE013664_1 putative lysyl-tRNA synthetase [Yersinia pestis KIM 10]
          Length = 332

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++          +R        G    +
Sbjct: 21  ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDIHLVPFETRFVGPGAADGLTLYM 80

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 81  MTSPEYHMKRLLAAGSGPIYQLGRSFRNEEAGRYHNP-EFTMLEWYRPHYDMYRLMNEVD 139

Query: 255 NVLRGVFE 262
           ++L+ + +
Sbjct: 140 DLLQQILD 147



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 6/111 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           F   Q  +  +   D     A ++++   G E+A+G       +  LQ F     ++   
Sbjct: 222 FPASQASLAEISTEDHR--VAERFEVYFKGIELANGFRELTDGDEQLQRFEQDNRNRAKR 279

Query: 518 ---VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
                     L  A + G+P   G+A G+DR+VML L A+ + +V  FP++
Sbjct: 280 GLPQNPIDMNLIAALKQGLPDCSGVALGVDRLVMLALNAERLSDVIAFPVN 330


>gi|45440371|ref|NP_991910.1| lysyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|51594766|ref|YP_068957.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108809912|ref|YP_653828.1| lysyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108813469|ref|YP_649236.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145600860|ref|YP_001164936.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|150260594|ref|ZP_01917322.1| putative lysyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153949624|ref|YP_001402619.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|161484883|ref|NP_667955.2| lysyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|162421074|ref|YP_001605290.1| lysyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165926674|ref|ZP_02222506.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165936482|ref|ZP_02225050.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166011859|ref|ZP_02232757.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166213985|ref|ZP_02240020.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167400570|ref|ZP_02306079.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167419045|ref|ZP_02310798.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423148|ref|ZP_02314901.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167469169|ref|ZP_02333873.1| hypothetical protein YpesF_15064 [Yersinia pestis FV-1]
 gi|170026026|ref|YP_001722531.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186893773|ref|YP_001870885.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218927565|ref|YP_002345440.1| lysyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229836621|ref|ZP_04456787.1| predicted lysyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229840233|ref|ZP_04460392.1| predicted lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229842311|ref|ZP_04462466.1| predicted lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229903950|ref|ZP_04519063.1| predicted lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270489062|ref|ZP_06206136.1| lysyl-tRNA synthetase-like protein GenX [Yersinia pestis KIM D27]
 gi|294502471|ref|YP_003566533.1| lysyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|25009411|sp|Q8ZIX3|SYK3_YERPE RecName: Full=Uncharacterized protein YjeA
 gi|81640579|sp|Q66FC6|SYK3_YERPS RecName: Full=Uncharacterized protein YjeA
 gi|123072499|sp|Q1C0Y9|SYK3_YERPA RecName: Full=Uncharacterized protein YjeA
 gi|123246211|sp|Q1CEE4|SYK3_YERPN RecName: Full=Uncharacterized protein YjeA
 gi|166229789|sp|A4TRQ1|SYK3_YERPP RecName: Full=Uncharacterized protein YjeA
 gi|166980065|sp|A7FMZ1|SYK3_YERP3 RecName: Full=Uncharacterized protein YjeA
 gi|238687245|sp|A9QYP2|SYK3_YERPG RecName: Full=Uncharacterized protein YjeA
 gi|238688466|sp|B1JMQ1|SYK3_YERPY RecName: Full=Uncharacterized protein YjeA
 gi|238691357|sp|B2K1Z3|SYK3_YERPB RecName: Full=Uncharacterized protein YjeA
 gi|45435227|gb|AAS60787.1| putative lysyl-tRNA synthetase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51588048|emb|CAH19654.1| putative lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP
           32953]
 gi|108777117|gb|ABG19636.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108781825|gb|ABG15883.1| putative lysyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115346176|emb|CAL19044.1| putative lysyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145212556|gb|ABP41963.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149290002|gb|EDM40079.1| putative lysyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152961119|gb|ABS48580.1| lysyl-tRNA synthetase-like protein [Yersinia pseudotuberculosis IP
           31758]
 gi|162353889|gb|ABX87837.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis Angola]
 gi|165915598|gb|EDR34207.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165921297|gb|EDR38521.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165989218|gb|EDR41519.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166204780|gb|EDR49260.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166963039|gb|EDR59060.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049938|gb|EDR61346.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167057318|gb|EDR67064.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169752560|gb|ACA70078.1| lysyl-tRNA synthetase-related protein GenX [Yersinia
           pseudotuberculosis YPIII]
 gi|186696799|gb|ACC87428.1| lysyl-tRNA synthetase-related protein GenX [Yersinia
           pseudotuberculosis PB1/+]
 gi|229679720|gb|EEO75823.1| predicted lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229690621|gb|EEO82675.1| predicted lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229696599|gb|EEO86646.1| predicted lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229706305|gb|EEO92313.1| predicted lysyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262360501|gb|ACY57222.1| lysyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262364448|gb|ACY61005.1| lysyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270337566|gb|EFA48343.1| lysyl-tRNA synthetase-like protein GenX [Yersinia pestis KIM D27]
 gi|294352930|gb|ADE63271.1| lysyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320013773|gb|ADV97344.1| putative lysyl-tRNA synthetase [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 325

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++          +R        G    +
Sbjct: 14  ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDIHLVPFETRFVGPGAADGLTLYM 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQLGRSFRNEEAGRYHNP-EFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE 262
           ++L+ + +
Sbjct: 133 DLLQQILD 140



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 6/111 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           F   Q  +  +   D     A ++++   G E+A+G       +  LQ F     ++   
Sbjct: 215 FPASQASLAEISTEDHR--VAERFEVYFKGIELANGFRELTDGDEQLQRFEQDNRNRAKR 272

Query: 518 ---VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
                     L  A + G+P   G+A G+DR+VML L A+ + +V  FP++
Sbjct: 273 GLPQNPIDMNLIAALKQGLPDCSGVALGVDRLVMLALNAERLSDVIAFPVN 323


>gi|320540950|ref|ZP_08040431.1| putative predicted lysyl-tRNA synthetase [Serratia symbiotica str.
           Tucson]
 gi|320028987|gb|EFW11185.1| putative predicted lysyl-tRNA synthetase [Serratia symbiotica str.
           Tucson]
          Length = 301

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++      F   +R             +
Sbjct: 4   ANLLKRAAILAEIRRFFADRGVLEVETPTMSQATVTDIHLFPFQTRFVGPGAADSLTLYM 63

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 64  MTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAGRYHNP-EFTMLEWYRPHYDMYRLMNEVD 122

Query: 255 NVLRGVFE 262
           ++L+ V +
Sbjct: 123 DLLQQVLD 130



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 7/105 (6%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G           Q F    
Sbjct: 200 AFVYH-FPASQAALAEISTEDHR--VAERFEVYFKGIELANGFRELTDGSEQRQRFEQDN 256

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
             +             L  A Q G+P   G+A G+DR+VML LGA
Sbjct: 257 RKRAQRGLPQHPIDNNLLDALQHGIPACSGVALGVDRLVMLALGA 301


>gi|54310444|ref|YP_131464.1| lysyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81614829|sp|Q6LM16|SYK3_PHOPR RecName: Full=Uncharacterized protein YjeA
 gi|46914885|emb|CAG21662.1| putative lysyl-tRNA synthetase-related protein [Photobacterium
           profundum SS9]
          Length = 323

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 16/158 (10%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYA 193
           K + +R  +++S+R     +  IE  TP ++ ++           +F+ P      + Y 
Sbjct: 12  KQLKQRAAVLSSIRDFFAGKEVIEVDTPAMSQATVTDVHLHTFQTEFVGPGYAGGQTLY- 70

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  +P+ + + L+++G    +QI   FR+E+      P EF  L+      +  D++N M
Sbjct: 71  MMTSPEFHMKRLLSAGSGPIYQICKSFRNEESGRYHNP-EFTMLEWYRPDFDHHDLMNEM 129

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           + +L+ V +         +   R+ Y  A  +     P
Sbjct: 130 DELLQLVLQ--------CDKAERMSYQQAFIQELGVCP 159



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 72/214 (33%), Gaps = 28/214 (13%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L  +  + D++  ++      + L +   E    +L             DP +       
Sbjct: 132 LLQLVLQCDKAERMSYQQAFIQELGVCPLEGTMEQLKGVARTLGLADIADPEQDRDTLLQ 191

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
               +  E  I         ++ DFP                     Q  +  +   D  
Sbjct: 192 LLFSMGVENKI---GQQVPAFVYDFP-------------------ASQAALAQINPTDNR 229

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQC 531
              A ++++   G E+A+G       +  L  F    + +  +    +     L  A + 
Sbjct: 230 --VAERFEVYFKGIELANGFHELANGDEQLVRFEQDNMKRISMGLKPQPIDLHLIEALRA 287

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
           G P   G+A GIDR++ML L   ++ +V+ FP+ 
Sbjct: 288 GFPDCAGVALGIDRLIMLALKLDHIDQVTAFPID 321


>gi|7437576|pir||S70779 asparagine-tRNA ligase (EC 6.1.1.22) - Xenorhabdus nematophilus
           (fragment)
          Length = 192

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 49/133 (36%), Gaps = 14/133 (10%)

Query: 443 YEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMS 501
           +E     K        F M           D  ++ A   D++  G  EI  G  R    
Sbjct: 69  FEAPVIMKNYPKNIKAFYMRMNE-------DGKTVAAM--DVLAPGIGEIIGGSQREERL 119

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           +++ +    +G++K      +       + G  PH G   G +R+V  + G  NVR+V  
Sbjct: 120 DMLDKRLEEMGLNK----EDYWWYRDLRRYGTVPHAGFGLGFERLVAYVTGVANVRDVIP 175

Query: 562 FPMSQNFCDLLMG 574
           FP +      LM 
Sbjct: 176 FPRTPRNATFLMN 188


>gi|83317631|ref|XP_731245.1| asparaginyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23491220|gb|EAA22810.1| asparaginyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 618

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 63/199 (31%), Gaps = 36/199 (18%)

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
           +  ++ + +     +  L  R          ++ +I          N+   +TPILT++ 
Sbjct: 247 MISKKYHTKEYLRNFPHLRGRTKLYSSIFRLKSDLIIETFNYFKKNNYTYINTPILTSND 306

Query: 174 PEGARDFLVP-----------------------------SRVNQGSFYALP---QAPQQY 201
            EG  +                                     +  F+  P       Q 
Sbjct: 307 CEGGGELFHVITSPNKNKKTEIETENINFINEKNNNFDKKNSEKKQFFKKPCYLNVSSQL 366

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL----NTMENVL 257
               +       F I   FR E+  + R   EF  L++E++F + + I+      ++ ++
Sbjct: 367 ALECLCCSIGDVFTINQSFRAENSNTSRHLSEFLMLEVELAFSDLNHIILESEKYIKEMI 426

Query: 258 RGVFEEFSNGNTVSNNFLR 276
             V  +  +   ++ +  +
Sbjct: 427 NFVLSKSEDIEYINEHHDQ 445



 Score = 67.4 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 12/116 (10%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
                 PF M        K ND     +    +  N  EIA G  R     ++ +     
Sbjct: 511 YPSNIKPFYM--------KLNDDKKTVSCMDLIFPNVGEIAGGSERETNLNILKEQMIKN 562

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            ++     + +       + G  PH G   GIDR++M +L   N+R++  FP   N
Sbjct: 563 KLNI----DLYNPYLELRKYGNIPHSGFGLGIDRLIMYILSMSNIRDIVPFPRYPN 614


>gi|197335731|ref|YP_002157129.1| putative lysyl-tRNA synthetase family protein GenX [Vibrio fischeri
           MJ11]
 gi|197317221|gb|ACH66668.1| putative lysyl-tRNA synthetase family protein GenX [Vibrio fischeri
           MJ11]
          Length = 318

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 74/180 (41%), Gaps = 9/180 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYAL 194
            + +R  I+ ++R        +E  TP ++ ++           DF+ P   +    Y +
Sbjct: 8   QLQQRADILTAIRSFFSERKVMEVDTPAMSHATVTDVHLHTFQTDFIGPGYADGTHLYFM 67

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +QI   FR+E+      P EF  L+      +  ++++ M 
Sbjct: 68  -TSPEFHMKRLLAAGSGCIYQINKAFRNEEAGRYHNP-EFTMLEWYRIGFDHHNLMDEMN 125

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
            +L  V + + +   T    F+++     +     +   +  P+ + ++ +     +  +
Sbjct: 126 ELLMLVLKCDNAERMTYQEAFIQVLGVCPLEASMDELRAVAAPLGLSDIADIEEDRDTLL 185



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 81/237 (34%), Gaps = 37/237 (15%)

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
           G  +    D MNE         L  +  + D +  +       + L +   EA    L  
Sbjct: 114 GFDHHNLMDEMNE---------LLMLVLKCDNAERMTYQEAFIQVLGVCPLEASMDELRA 164

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
                      D  +           +  E+ I         ++ DFP            
Sbjct: 165 VAAPLGLSDIADIEEDRDTLLQLLFSMGVEVKI---GQDVPAFVYDFP------------ 209

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
                    Q  +  +  +D     A ++++   G E+A+G      ++  L  F     
Sbjct: 210 -------ASQAALAKINPSDPR--VAERFEVYFKGIELANGFHELDNAKEQLMRFEEDNA 260

Query: 514 SKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            ++ +    +     L  A + G+P   G+A GIDR++ML +G K++ +V+ FP  +
Sbjct: 261 KRKSMGLIEQPIDYHLIAALEAGLPNCSGVALGIDRLIMLAMGEKHIDQVTAFPFDR 317


>gi|90581260|ref|ZP_01237057.1| lysyl-tRNA synthetase [Vibrio angustum S14]
 gi|90437499|gb|EAS62693.1| lysyl-tRNA synthetase [Vibrio angustum S14]
          Length = 322

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 6/112 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G       +  LQ F      +  +
Sbjct: 212 FPASQAALAQINPTDPR--VAERFEVYFKGIELANGFHELANGDEQLQRFEQDNQKRLEM 269

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
               +     L  A + G P   G+A GIDR++ML LG  ++ +V+ FP+ +
Sbjct: 270 GLKPQPIDMNLVNALRAGFPDCAGVALGIDRLIMLALGLDHIEKVTAFPIDR 321



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 8/124 (6%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYALPQA 197
           KR  ++  +R    A   +E  TP ++ ++           +F+ P   + G    L  +
Sbjct: 15  KRAHLLAVIRQFFAAREVMEVDTPAMSQATVTDVHLHTFQTEFVGPGYAD-GQTLFLMTS 73

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ + + L+++G    +QI   FR+E+      P EF  L+      +   +++ M ++L
Sbjct: 74  PEFHMKRLLSAGSGAIYQICKSFRNEESGRYHNP-EFTMLEWYRPNFDHHLLMDEMNDLL 132

Query: 258 RGVF 261
           + V 
Sbjct: 133 QLVL 136


>gi|213417368|ref|ZP_03350510.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 264

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 28/191 (14%)

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
           +      Q      A    + +   P FR E+  + R   EF+ L+ E++F + +D    
Sbjct: 4   SFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFADLEDNARL 63

Query: 253 MENVLRGVFEEFSN---------------------GNTVSNNFLRICYDDAIRRYGTDKP 291
            E +L+ VF+                            VS +F ++ Y DA+        
Sbjct: 64  AEAMLKYVFKAVLEERADDMKFFAERVDKDAIARLERFVSTDFAQVDYTDAVAILERCGK 123

Query: 292 DLRNPI-IMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
              NP+    ++ +EH  +     F   + V    +            R   D     A 
Sbjct: 124 TFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEI-----KAFYMRLNEDGKTVAAM 178

Query: 350 SQGQPGLAYIF 360
               PG+  I 
Sbjct: 179 DVLAPGIGEII 189



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++K      +      
Sbjct: 168 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDL 221

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 222 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 260


>gi|319958782|gb|ADV90561.1| lysyl-tRNA synthetase [Entamoeba nuttalli]
          Length = 463

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 4/98 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGM 533
              +++L     EIA+     +   V    F      K   ++           A +   
Sbjct: 162 LIERFELFILKREIANAYTELNNPIVQRSNFEQQAKDKAAGDDEAQLVDEVFLDAIEHAF 221

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PP GG   GIDR+ MLL    N++EV LFP  +   +L
Sbjct: 222 PPTGGWGLGIDRLAMLLADVDNIKEVILFPTMRPEDEL 259


>gi|266631457|emb|CBA11568.1| asparaginyl-tRNA synthetase-like [Streptomyces lydicus]
          Length = 326

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 6/141 (4%)

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
            LD         +  + +I+++ R  + A  F+E   P++  ++  G R          G
Sbjct: 11  HLD--SPRTRAVLRIQQQIVSAARDHLRALGFVELLPPVIGPATDPGGRGAKQVDVDYYG 68

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP---RSDRLPGEFYQLDMEMSFVEQ 246
             Y L  +   YKQ  + S FD+ F +AP  R E P    + R   EF+Q D+E++    
Sbjct: 69  HRYKLMTSAIMYKQAALLS-FDKIFCVAPNVRLEPPETCSTQRHLAEFHQFDVEIAGAGA 127

Query: 247 DDILNTMENVLRGVFEEFSNG 267
            D +   E+++R      +  
Sbjct: 128 QDAMGVAEDLVRAAVRSVTEQ 148



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 44/127 (34%), Gaps = 10/127 (7%)

Query: 444 EWNEEEKKIDFAHNPF---TMPQGGMESLKGNDLLSIKAFQ-YDLVC--NGFEIASGGIR 497
           +W  E      A  PF   + P+G        D       + +DL+      E+ SG  R
Sbjct: 197 DWEGEAMLSRKATRPFFVTSYPKGSRGFYDREDPEVPGTLRNFDLLAAEGFGELISGAER 256

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 ++      G +      ++       + G+P   G   GI+R+   + G   V 
Sbjct: 257 EFDHARIVTRMRETGENPG----KYQHFLEVAREGIPASAGFGIGIERLTRYVCGLDAVW 312

Query: 558 EVSLFPM 564
           E + FP 
Sbjct: 313 EATAFPK 319


>gi|260772051|ref|ZP_05880968.1| lysyl-tRNA synthetase-related protein [Vibrio metschnikovii CIP
           69.14]
 gi|260612918|gb|EEX38120.1| lysyl-tRNA synthetase-related protein [Vibrio metschnikovii CIP
           69.14]
          Length = 324

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 69/170 (40%), Gaps = 16/170 (9%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYA 193
             + +R R++ ++R        +E  TP ++ ++            F+ P     G    
Sbjct: 13  AQLQQRARLLQNIRQFFAEREVLEVDTPAMSQATVTDIHLQTFQTQFVGPDYAA-GKTLY 71

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    +QI   FR+E+      P EF  L+      +  D+++ +
Sbjct: 72  LMTSPEFHMKRLLAAGSGSIYQINKAFRNEENGRYHNP-EFTLLEWYRVGFDHHDLMDEV 130

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
           + +L+ +          ++   RI Y DA  +     P   + + +  V 
Sbjct: 131 DALLQMIL--------STDTAERITYQDAFLQVLNVCPLEASLVELKQVA 172



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 28/212 (13%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L  +    D +  +       + LN+   EA  V L             +P +       
Sbjct: 133 LLQMILSTDTAERITYQDAFLQVLNVCPLEASLVELKQVAAQLGLSDIAEPEQDRDTLLQ 192

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
               I  E  I      +  ++ DFP                     Q  +  +  ND  
Sbjct: 193 LLFSIGVEAHI---GQHKPVFVYDFP-------------------ASQAALAKVNRNDPR 230

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQC 531
              A ++++   G E+A+G      +    + F      +  +    +     L  A   
Sbjct: 231 --VADRFEVYFKGIELANGFHELDDAAEQRKRFEQDNQKRIAMGLVAQPIDENLLAALTA 288

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 289 GLPTCAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|297568252|ref|YP_003689596.1| tRNA synthetase class II (D K and N) [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924167|gb|ADH84977.1| tRNA synthetase class II (D K and N) [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 294

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 19/172 (11%)

Query: 155 RMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
                +F+E  TP++  + +PE     L+P    +   + L  +P+   + L+A G  + 
Sbjct: 17  FFEQRDFLEVETPLMIPAPAPE---PHLLPQPAGR---WFLQTSPELCMKRLLARGHAKI 70

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS------NG 267
           FQI  CFR ++ R  R   EF  L+   +  +   +++  E +L  V  E +      + 
Sbjct: 71  FQICKCFRRQE-RGRRHVPEFTMLEWYRAGADYLALMDDCEQLLTAVAAELALPGENGHQ 129

Query: 268 NTVSNNFLRICYDDAIRRYGTDKPD--LR---NPIIMHNVTEHFVHSEFRVF 314
            ++   + R+   +A  RY   + D  LR      ++    E  +      F
Sbjct: 130 VSLVLPWERLTVAEAFCRYAAMEVDEALRRDLFDQLLVEKIEPHLGVGRPTF 181



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 12/107 (11%)

Query: 465 GMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI-------SKE 516
            + +L        + A +++L   G E+A+G           + F               
Sbjct: 188 ELAALARPKPGQPEVAERFELYLGGVELANGFSELIDPVEQRRRFEADRRLIRAAGRRPP 247

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +   F     A    MP   GIA G+DR+VM++LG +N+ +V  FP
Sbjct: 248 PMPEPFLAELDA----MPQAAGIALGLDRLVMIMLGKENIDQVLAFP 290


>gi|269137698|ref|YP_003294398.1| lysyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267983358|gb|ACY83187.1| lysyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304557753|gb|ADM40417.1| lysyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 325

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 75/179 (41%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I++++R        +E  TP ++ ++          +        QG    L
Sbjct: 14  ANLLKRASILSTIRRFFSDRGVLEVDTPSMSQATVTDVHLVPFQTHFVGPGVAQGMTLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQLCRSFRNEESGRYHNP-EFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ V E E +   +    F+R      +     DK  LR      +++    + E R
Sbjct: 133 DLLQQVLECESAETLSYQQAFIR---HLDVDPLSADKTQLREAAAKLDLSNVADNEEDR 188



 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 7/116 (6%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +  F ++ F   Q  +  +   D     A ++++   G E+A+G      +      F  
Sbjct: 208 RPAFVYH-FPASQASLAQISTEDHR--VAERFEVYYRGVELANGFHELTDAAEQRLRFEQ 264

Query: 511 VGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               +       +     L  A + GMP   G+A G+DR++ML L A+ + EV  F
Sbjct: 265 DNRKRAAAGLPQQPIDEHLLAALEHGMPDSSGVALGVDRLIMLALSAERLSEVIAF 320


>gi|116329779|ref|YP_799498.1| tRNA synthetase class II (D, K and N) [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116122672|gb|ABJ80565.1| tRNA synthetase class II (D, K and N) [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
          Length = 315

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 94/236 (39%), Gaps = 13/236 (5%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
           +KR + ++ +R     +N++E  TP L A  S E   D  +    ++     L  +P+  
Sbjct: 10  IKRAQFLSVLRKFFEKKNYLEMDTPCLKAVPSMEPYLDPFLVRSPSRKEKGYLITSPEYS 69

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + +++ G ++ ++I   FR  +  S     EF  L+     +  +D++N    +L  + 
Sbjct: 70  LKEILSKGLEKIYEITHTFRSGEEGSLFHSAEFLMLEFYTVGISLEDLMNFCTELLEVLD 129

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRY---GTDKPDLRNPIIMHNVTEH------FVHSEFR 312
            EF       N   +I  ++++R+Y   G  K +L   I+   ++E       +  S F 
Sbjct: 130 CEFQAFGFDRNKVRKISVEESLRKYAHCGISKSELDRVILERRLSEIPAEKRAYEDSFFI 189

Query: 313 VFSKILSV---NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDE 365
           VF  ++          ++  P +    ++        +    G   L   F  L +
Sbjct: 190 VFLNLVEAHLPKEFVFLYDYPPELAALSKIESGFAKRFELYYGSLELGNAFEELTD 245



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 6/105 (5%)

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS-EVMLQAFSNVGISKEVVEN 520
               + +L  + + S  A +++L     E+ +         E + +      + K + + 
Sbjct: 209 YPPELAAL--SKIESGFAKRFELYYGSLELGNAFEELTDPVEQISRFCHEQDLRKNLGKE 266

Query: 521 RFG---GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            F    GL RA + G+P   GI+ G+DR+++ +LG  ++RE+S +
Sbjct: 267 VFSVDPGLERALREGIPDSCGISIGLDRLLLCILGGSSLREISPY 311


>gi|207344766|gb|EDZ71796.1| YHR019Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 238

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 6/117 (5%)

Query: 15  SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCID 74
           S VG  V++SGW+HR+R +  +IF+ +RD  G  Q V + D A  +    +  E  + + 
Sbjct: 126 SKVGQRVKVSGWIHRLRSNKKVIFVVLRDGSGFIQCVLSGDLALAQQTLDLTLESTVTLY 185

Query: 75  GLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKYR 129
           G ++             G +EL+    E++ +A   E             S+    R
Sbjct: 186 GTIVKLPEG----KTAPGGVELNVDYYEVVGLAPGGEDSFTNKIAEGSDPSLLLDQR 238


>gi|116191979|ref|XP_001221802.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88181620|gb|EAQ89088.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 265

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 57/141 (40%), Gaps = 17/141 (12%)

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           +  +  EG           + ++  L Q+ Q Y + +M S     + I   FR E   + 
Sbjct: 1   MVQTQVEGGSTLFKYDYYGEEAY--LTQSSQLYLETVMQS-LGNVYCIEKSFRAEKSLTR 57

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS--------------NGNTVSNNF 274
           R   E+  ++ E+ F+E +D+L+ +E ++  V ++                     +  +
Sbjct: 58  RHLSEYTHVEAELDFIEFNDLLDHLEEMISRVVDKVLADETMRGYVETLNPGFQKPTRPY 117

Query: 275 LRICYDDAIRRYGTDKPDLRN 295
           +R+ Y++AI       P + N
Sbjct: 118 MRMKYEEAIEWLNKQDPPILN 138


>gi|27364671|ref|NP_760199.1| poxB regulator PoxA [Vibrio vulnificus CMCP6]
 gi|37681279|ref|NP_935888.1| lysyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|320155067|ref|YP_004187446.1| lysyl-tRNA synthetase-related protein [Vibrio vulnificus MO6-24/O]
 gi|33301726|sp|Q8DCX0|SYK3_VIBVU RecName: Full=Uncharacterized protein YjeA
 gi|39932253|sp|Q7MGX9|SYK3_VIBVY RecName: Full=Uncharacterized protein YjeA
 gi|27360816|gb|AAO09726.1| Lysyl-tRNA synthetase (class II) [Vibrio vulnificus CMCP6]
 gi|37200030|dbj|BAC95859.1| lysyl-tRNA synthetase-related protein [Vibrio vulnificus YJ016]
 gi|319930379|gb|ADV85243.1| lysyl-tRNA synthetase-related protein [Vibrio vulnificus MO6-24/O]
          Length = 323

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 63/157 (40%), Gaps = 16/157 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYAL 194
            + +R  +I ++R        +E  TP ++ ++           +F+ P    QG    L
Sbjct: 13  QLRQRAVLIANIRQFFAQRGVLEVDTPAMSHATVTDIHLHTFQTEFVGPGYA-QGRHLHL 71

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+A  FR+E+        EF  L+      +   +++ M+
Sbjct: 72  MTSPEFHMKRLLAAGSGCIYQMAKAFRNEE-NGRHHNPEFTMLEWYRVGFDHHQLMDEMD 130

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           ++L+ + +             R+ Y  A        P
Sbjct: 131 DLLQLILK--------CGTAERMTYQQAFLTVLGVCP 159



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 68/188 (36%), Gaps = 35/188 (18%)

Query: 380 NIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMD 439
           ++   +++  RL + D         +P +           I  E  I         ++ D
Sbjct: 163 SMAELKSVAARLGLSD-------IAEPEEDRDTLLQLLFSIGVEAKI---GQQVPAFVYD 212

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNH 499
           FP                     Q  +  +  ND     A ++++   G E+A+G     
Sbjct: 213 FP-------------------ASQAALAKINPNDPR--VADRFEVYFKGIELANGFHELD 251

Query: 500 MSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
             +  L  F      +  +    +     L  A + G+P   G+A G+DR++ML LG  +
Sbjct: 252 NPQEQLTRFEQDNAKRIDMGLTPQPIDYHLIAALESGLPACAGVALGVDRLIMLSLGCTH 311

Query: 556 VREVSLFP 563
           + E++ FP
Sbjct: 312 IDEITAFP 319


>gi|213022891|ref|ZP_03337338.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 114

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 3/91 (3%)

Query: 187 NQGSFYAL---PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               F+          Q      A    + +   P FR E+  + R   EF+ L+ E++F
Sbjct: 24  FDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAF 83

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
            + +D     E +L+ VF+           F
Sbjct: 84  ADLEDNARLAEAMLKYVFKAVLEERADDMKF 114


>gi|269966843|ref|ZP_06180916.1| Lysyl-tRNA synthetase-related protein [Vibrio alginolyticus 40B]
 gi|269828510|gb|EEZ82771.1| Lysyl-tRNA synthetase-related protein [Vibrio alginolyticus 40B]
          Length = 323

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 63/157 (40%), Gaps = 16/157 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYAL 194
            + +R  ++ S+R        +E  TP ++ ++           +F+ P   +    + +
Sbjct: 13  QLRQRATLVASIRQFFADRQVMEVDTPAMSHATVTDIHLHTFQTEFVGPGYADGSKLFFM 72

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +QI   FR+E+      P EF  L+      +   +++ M+
Sbjct: 73  -TSPEFHMKRLLAAGSGCIYQINKAFRNEENGRYHNP-EFTMLEWYRVGFDHHKLMDEMD 130

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           ++L+ V +             R+ Y  A        P
Sbjct: 131 DLLQLVLK--------CGAAQRMTYQQAFIDVLGVCP 159



 Score = 70.5 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 74/234 (31%), Gaps = 37/234 (15%)

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
           G  +    D M++         L  +  +   +  +         L +   E     L  
Sbjct: 119 GFDHHKLMDEMDD---------LLQLVLKCGAAQRMTYQQAFIDVLGVCPLEGSMTELKA 169

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
                      +P +           +  E   I  +     ++ DFP            
Sbjct: 170 AASKLGLSDIAEPEEERDTLLQLLFSVGVE-NKIGQDV--PAFVYDFP------------ 214

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
                    Q  +  +   D     A ++++   G E+A+G       +  L  F     
Sbjct: 215 -------ASQAALAKINPQDHR--VADRFEVYFKGIELANGFHELDNPKEQLARFEQDNA 265

Query: 514 SKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  +    +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 266 KRIEMGLKPQPIDYHLISALEAGLPDCAGVALGIDRLIMLALGCDHIDQVTAFP 319


>gi|327396213|dbj|BAK13635.1| putative lysyl-tRNA synthetase PoxA [Pantoea ananatis AJ13355]
          Length = 325

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 58/128 (45%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            +++KR  II  +R        +E  TP ++ ++          +R      ++G    L
Sbjct: 14  ASLIKRAAIIAEVRRFFADRGVLEVDTPAMSQATITDIHLVPFQTRFVGPGLSEGRDLWL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQMGRSFRNEEAGRYHNP-EFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE 262
           ++L+ V E
Sbjct: 133 DLLQQVLE 140



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 67/193 (34%), Gaps = 35/193 (18%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCF-FIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
           L+    +       + +G+        D L    F       I Q+         + C+I
Sbjct: 162 LSADKAQLREAAEKLGEGELASREEDRDTLLMLLFMLGVEPKIGQD---------KPCFI 212

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
             FP                     Q  +  +   D     A ++++   G E+A+G   
Sbjct: 213 YHFP-------------------ASQAALAEISTEDHR--VAERFEVYYKGIELANGFRE 251

Query: 498 NHMSEVMLQAFSNVGISKEVV---ENRFGGLY-RAFQCGMPPHGGIAAGIDRIVMLLLGA 553
              S    Q F      +      ++        A + GMP   G+A G+DR++ML L A
Sbjct: 252 LTDSREQRQRFEQDNRRRAARGLPQHPIDHYLLAALEHGMPACSGVALGVDRLIMLALKA 311

Query: 554 KNVREVSLFPMSQ 566
           +++ EV  FP+ +
Sbjct: 312 ESLSEVIAFPVDR 324


>gi|301123771|ref|XP_002909612.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262100374|gb|EEY58426.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 217

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 12/118 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                   +  YD++  G E+       H  +++++    
Sbjct: 109 KFPLAVRPFYTMPD--------PTDKRWSNSYDMMIRGEEMVLCAQHVHDPKLLMERMDE 160

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           +G+     +        +      PHGG   G++R+VML LG  N+ + S+ P     
Sbjct: 161 LGVP----QESMRNYIYSLHLDSLPHGGGGIGLERVVMLYLGLGNISKSSMLPRDPKR 214



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 3/76 (3%)

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM-ASGFDRYFQIAPCFRDEDPRS 227
           L   +     ++      +Q +  A  Q+PQ YK +    +  +R F+I P FR E   +
Sbjct: 4   LVGGASGSGTNYFTLKHFDQDATLA--QSPQTYKHMACDVASLERVFEIGPGFRAETSNT 61

Query: 228 DRLPGEFYQLDMEMSF 243
            R   E   LD+EM+ 
Sbjct: 62  HRHMCELVGLDLEMTI 77


>gi|292490715|ref|YP_003526154.1| lysyl-tRNA synthetase-related protein GenX [Nitrosococcus
           halophilus Nc4]
 gi|291579310|gb|ADE13767.1| lysyl-tRNA synthetase-related protein GenX [Nitrosococcus
           halophilus Nc4]
          Length = 331

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 59/158 (37%), Gaps = 14/158 (8%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSR----VNQ 188
           R     + +  R R++  +R        +E  TPIL TA +       L          +
Sbjct: 9   RPTANRRALEARARLLADIRRFFAERGVLEVETPILATAPATAPHLHSLTTHYQGPQNPE 68

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G    L  +P+   + L+A+G    +Q+A  FR+ +    R   EF  L+      +   
Sbjct: 69  GQRLFLQTSPEHAMKRLLAAGSGPIYQLARVFRNGESG-RRHNPEFTLLEWYRPGFDHWA 127

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           ++  ++  L  +          +    R+ Y +A + Y
Sbjct: 128 LMEEVDIFLSLLL--------GTPKGERLSYGEAFQHY 157



 Score = 47.0 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 54/138 (39%), Gaps = 21/138 (15%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
             C++ D+P       E ++     P                    A ++++  NG E+A
Sbjct: 210 RPCFVYDYP-----ASEAQLARVRPPSKAC------------SVSLAERFEVYLNGMELA 252

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ----CGMPPHGGIAAGIDRIVM 548
           +G      +    Q F      ++        L          G+P   G+A G+DR++M
Sbjct: 253 NGYHELSDAAEQRQRFQADLAHRKARGLEEVPLDELLLAALAQGLPDCAGVALGVDRLLM 312

Query: 549 LLLGAKNVREVSLFPMSQ 566
           LLLG+ ++ EV  FP+ +
Sbjct: 313 LLLGSLHIEEVLAFPVDR 330


>gi|212711000|ref|ZP_03319128.1| hypothetical protein PROVALCAL_02069 [Providencia alcalifaciens DSM
           30120]
 gi|212686168|gb|EEB45696.1| hypothetical protein PROVALCAL_02069 [Providencia alcalifaciens DSM
           30120]
          Length = 325

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 76/180 (42%), Gaps = 7/180 (3%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N+++R +I+  +R        +E  TP ++ ++          +R       QG    L
Sbjct: 14  ANLLQRAKIVAEIRRFFADRCVLEVDTPAMSQATVTDIHLVPFETRFVGPGAAQGINLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQMCRSFRNEEAG-RHHNPEFTMLEWYRPHFDMYRLINEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           ++L+ V E E +   +    FLR    D +    ++  ++   + + NV +     +  +
Sbjct: 133 DLLQQVLECESAELLSYQQAFLRHLDIDPLSAEKSELREVAARLDLSNVADQEEDRDTLL 192



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 8/121 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           EK     H P T     + S + +      A ++++   G E+A+G           Q F
Sbjct: 207 EKPAVVYHFPATQASLAVISTEDH----RVAERFEVYYKGMELANGFHELTDVSEQRQRF 262

Query: 509 SNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                 +  +    +     L  A + G+P   G+A G+DR++ML L A+ + +V  FP+
Sbjct: 263 EQDNRKRAAMGLPVQPIDENLLAALEHGLPACSGVAVGVDRLIMLALNAERISDVIAFPV 322

Query: 565 S 565
           +
Sbjct: 323 T 323


>gi|207109521|ref|ZP_03243683.1| aspartyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 41

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 27/41 (65%)

Query: 553 AKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           + ++R+V  FP +Q    LL  +PS ++ EQLREL +R+ +
Sbjct: 1   SNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK 41


>gi|304396301|ref|ZP_07378182.1| lysyl-tRNA synthetase-related protein GenX [Pantoea sp. aB]
 gi|304355810|gb|EFM20176.1| lysyl-tRNA synthetase-related protein GenX [Pantoea sp. aB]
          Length = 325

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 66/193 (34%), Gaps = 35/193 (18%)

Query: 379 LNIVNTEAIRVRLDMQDGDSC-FFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
           L+    +       + +G+        D L    F       I Q+         + C++
Sbjct: 162 LSADKAQLREAAEKLGEGELARAEEDRDTLLMLLFMLGVEPKIGQD---------KPCFV 212

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
             FP                     Q  +  +   D     A ++++   G E+A+G   
Sbjct: 213 YHFP-------------------ASQAALAEISTEDHR--VAERFEVYYKGIELANGFRE 251

Query: 498 NHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
              S    Q F      +      V      L  A   GMP   G+A G+DR++ML L A
Sbjct: 252 LTDSREQRQRFEQDNRRRAARGLPVHPIDTYLLDALAHGMPACSGVALGVDRLIMLALKA 311

Query: 554 KNVREVSLFPMSQ 566
           +++ +V  FP+ +
Sbjct: 312 ESLSDVIAFPVDR 324



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 57/128 (44%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++          +R       QG    L
Sbjct: 14  ANLLKRAAILAEVRRFFADRGVLEVDTPAMSQATITDIHLVPFQTRFVGPGAAQGRDLWL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+A  FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQMARSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE 262
           ++++ V E
Sbjct: 133 DLMQQVLE 140


>gi|148976860|ref|ZP_01813515.1| lysyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145963734|gb|EDK28994.1| lysyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 323

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +  ND     A ++++   G E+A+G       +  L+ F +    +  +
Sbjct: 213 FPASQAALAKINPNDPR--VADRFEVYFKGIELANGFHELDKPQEQLKRFEDDNAKRNEM 270

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 271 GLSPQPIDHHLIEALKAGLPDCAGVALGIDRLIMLALGYDHIDDVTAFP 319



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 65/158 (41%), Gaps = 16/158 (10%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYA 193
           K + +R  I++ +R      + +E  TP ++ ++           +F+ P    QG    
Sbjct: 12  KQLKQRADILSQVRQFFAERDVMEVDTPAMSHATVTDVHLHTFKTEFVGPGYA-QGQPLF 70

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
              +P+ + + L+A+G    +QI   FR+E+      P EF  L+      +  ++++ M
Sbjct: 71  FMTSPEFHMKRLLAAGSGCIYQICKSFRNEENGRYHNP-EFTMLEWYRVGFDHHNLMDEM 129

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           + +L+ + +        S    R+ Y  A        P
Sbjct: 130 DLLLQQILK--------SGEAERMTYQQAFIDVLGVCP 159


>gi|222874194|gb|EEF11325.1| predicted protein [Populus trichocarpa]
          Length = 178

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 13/128 (10%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
             E N  + K    ++ F   Q  +  +   D     A +++    G E+A+G      +
Sbjct: 52  LVEPNIGQNKPIAVYH-FPATQAALAQISSEDHR--VAERFEFYYKGIELANGFNELTDA 108

Query: 502 EVMLQAFSNVG-------ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +     F+          + +  +++RF     A Q G+P   G+A G+DR++ML LGA+
Sbjct: 109 QEQEHRFNQDNRLREQLGLPQHEIDHRF---LGALQAGLPNTAGVALGVDRLIMLALGAE 165

Query: 555 NVREVSLF 562
           N+ EV  F
Sbjct: 166 NISEVISF 173


>gi|308189053|ref|YP_003933184.1| lysyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308059563|gb|ADO11735.1| putative lysyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 325

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 66/193 (34%), Gaps = 35/193 (18%)

Query: 379 LNIVNTEAIRVRLDMQDGDSC-FFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWI 437
           L+    +       + +G+        D L    F       I Q+         + C++
Sbjct: 162 LSADKAQLREAAEKLGEGELARAEEDRDTLLMLLFMLGVEPKIGQD---------KPCFV 212

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
             FP                     Q  +  +   D     A ++++   G E+A+G   
Sbjct: 213 YHFP-------------------ASQAALAEISTEDHR--VAERFEVYYKGIELANGFRE 251

Query: 498 NHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
              S    Q F      +      V      L  A   GMP   G+A GIDR++ML L A
Sbjct: 252 LTDSREQRQRFEQDNRRRAARGLPVHPIDTYLLDALAHGMPACSGVALGIDRLIMLALKA 311

Query: 554 KNVREVSLFPMSQ 566
           +++ EV  FP+ +
Sbjct: 312 ESLSEVIAFPVDR 324



 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 57/128 (44%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+  +R        +E  TP ++ ++          +R       QG    L
Sbjct: 14  ANLLKRAAILAEVRRFFADRGVLEVDTPAMSQATITDIHLVPFQTRFVGPGAAQGRDLWL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+A  FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQMARSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE 262
           ++++ V E
Sbjct: 133 DLMQQVLE 140


>gi|255546231|ref|XP_002514175.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223546631|gb|EEF48129.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 364

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND     A    LV    E+  G  R    EV+ Q  + +G+  E  E          + 
Sbjct: 269 NDDSKTVAAMDVLVPKVGELIGGSQREERLEVIQQRIAEMGLPVEPYE----WYLDLRRY 324

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   H G   G +R+++   G  N+R+V  FP      DL
Sbjct: 325 GTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGRADL 364



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 190 SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+   A      Q +           +   P FR E+  + R   EF+ ++ E++F + 
Sbjct: 95  DFFTRQAFLTVSGQLQVETYVCALSSVYTFGPTFRAENSHTSRHLAEFWMIEPEIAFGDL 154

Query: 247 DDILNTMENVLRGVFEEFSNGN 268
           +D +N  E  ++ + +   +  
Sbjct: 155 EDDMNCAEAYVKYMCQWLLDKC 176


>gi|22074735|gb|AAM08124.1| Lysyl-tRNA synthetase [Gallus gallus]
          Length = 249

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 17/137 (12%)

Query: 20  FVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANP-----DSACFEIAKSVRSEWVLCI 73
            V ++G +H  R  G  +IF D+R      QV+AN      +   F I   +R   ++ +
Sbjct: 122 TVSVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRLYKSEEEYFRINNKLRRGDIIGV 181

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDL 133
            G                G++ +   +I +LS      LP        +  R++ R+LDL
Sbjct: 182 VG---------NPGKTKKGELSIIPYEITLLSPCL-HMLPHLHFGLKDKETRYRQRYLDL 231

Query: 134 R-RDTLHKNIVKRTRII 149
              D + +  + R +I+
Sbjct: 232 ILNDYVRQKFITRAKIV 248


>gi|290473609|ref|YP_003466479.1| putative lysyl-tRNA synthetase with Class II aaRS and biotin
           synthetase domains [Xenorhabdus bovienii SS-2004]
 gi|289172912|emb|CBJ79683.1| putative lysyl-tRNA synthetase with Class II aaRS and biotin
           synthetase domains [Xenorhabdus bovienii SS-2004]
          Length = 325

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 71/180 (39%), Gaps = 7/180 (3%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR +I+  +R        +E  TP +  ++          +R        G    L
Sbjct: 14  ANLLKRAKILAEIRRFFADRGVLEVETPTMGQATITDIHLVPFQTRFVGPGAADGLTLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+ +G    +Q+   FR+E+        EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLTAGSGSIYQMGRSFRNEEAG-RHHNPEFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           ++L+ + E E +   +    F+R    D +        ++   + + N+ +     +  +
Sbjct: 133 DLLQQILECESAESLSYQQVFIRYLEIDPLTASKEKLREVAAKLDLSNIADQEEDRDTLL 192



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 12/112 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML-------QAFSNV 511
           F   Q  +  +   D     A ++++   G E+A+G      S           +    +
Sbjct: 215 FPASQASLAEISKEDHR--VAERFEVYFKGMELANGFRELTDSHEQRLRFVQDNRKREAM 272

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+    ++ R   L +A + GMP   G+A G+DR++ML LGA+ + EV  FP
Sbjct: 273 GLPVMPIDER---LLKALEHGMPECAGVALGVDRLIMLALGAERISEVIAFP 321


>gi|149199813|ref|ZP_01876843.1| lysyl-tRNA synthetase-related protein [Lentisphaera araneosa
           HTCC2155]
 gi|149137101|gb|EDM25524.1| lysyl-tRNA synthetase-related protein [Lentisphaera araneosa
           HTCC2155]
          Length = 292

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 11/151 (7%)

Query: 145 RTRIINSMRCRMIAENFIECSTPI--LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYK 202
           R+ ++ ++R      +FIE  TPI  LT      A +  + +    G F  L  +P+ + 
Sbjct: 10  RSDLLQALRRFFWQRDFIEVETPIRLLTP-----ALEDYIDAIPANGKF--LRTSPELHM 62

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + L+  G ++ FQI  CFR+ +   +R   EF  L+   +  +   I + ++ + +   +
Sbjct: 63  KRLLCEGAEKIFQIGACFREHEHG-ERHREEFTMLEWYEAHCDYRKIADDLQALFKFCSK 121

Query: 263 EFS-NGNTVSNNFLRICYDDAIRRYGTDKPD 292
           E +   +  S  F  +  +DA   Y     D
Sbjct: 122 ELACREDYFSQTFEVLSLEDAFGSYAKISLD 152



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 4/89 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE----NRFGGLYRAFQCGM 533
            A ++++  +G E+A+       ++   Q F      +   +    +      +A + GM
Sbjct: 200 LAERFEVYVDGLELANAYSELTDAQEQRQRFVECQDLRTSQKRITYDLDENFLQALEKGM 259

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           P  GGIA G+DR+ M+L G K++  V  F
Sbjct: 260 PEAGGIALGVDRLAMVLFGHKDISSVLAF 288


>gi|148261361|ref|YP_001235488.1| lysine--tRNA ligase [Acidiphilium cryptum JF-5]
 gi|326404848|ref|YP_004284930.1| hypothetical protein ACMV_27010 [Acidiphilium multivorum AIU301]
 gi|146403042|gb|ABQ31569.1| Lysine--tRNA ligase [Acidiphilium cryptum JF-5]
 gi|325051710|dbj|BAJ82048.1| hypothetical protein ACMV_27010 [Acidiphilium multivorum AIU301]
          Length = 329

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 5/123 (4%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPE----GARDFLVPSRVNQGSFYALPQAP 198
            +R  +  + R    A  +IE  TP L  +  E     A   +V +     +   L  +P
Sbjct: 19  RRRGLLAQATRAFFTARGYIEVETPCLVPAPGEEVHLAALSTIVHAPDGAAARKWLHTSP 78

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L+A G  R FQ+A  +RD    SD    EF  L+      +   ++     +LR
Sbjct: 79  EFAMKKLLAGGAGRMFQLARVWRD-HEGSDTHAPEFTMLEWYRPGADFSSMIEETTQLLR 137

Query: 259 GVF 261
            V 
Sbjct: 138 AVL 140



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 59/197 (29%), Gaps = 37/197 (18%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQE---------LGIINC 429
           L  +   ++        G       GD  +  + A  AR    ++         LG I  
Sbjct: 153 LAAIEVLSVAEAFARHCGVDVLASVGDADRLAADAGVARRD-GEDWEDLFFRLMLGRIEP 211

Query: 430 N--CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
           +       ++ D+P                    P   +   + +D     A +++L   
Sbjct: 212 HLGRQNPTFLTDWP-------------------APLAALARRRADDPR--VAERFELYVC 250

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR----AFQCGMPPHGGIAAGI 543
           G E+A+              F      +  +  R          A    MP   GIA G 
Sbjct: 251 GMELANAFAELTDPVEQRARFEADRARRHALYGREDWPLDEDFVAAVGRMPDCAGIALGF 310

Query: 544 DRIVMLLLGAKNVREVS 560
           DR+ M+  GA  + +V 
Sbjct: 311 DRLAMIAAGAARITDVL 327


>gi|317153318|ref|YP_004121366.1| phenylalanyl-tRNA synthetase class IIc [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943569|gb|ADU62620.1| phenylalanyl-tRNA synthetase class IIc [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 369

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/338 (15%), Positives = 109/338 (32%), Gaps = 56/338 (16%)

Query: 23  LSGWVHRVRPHGGIIFLDIRDH-YGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           +SG V  ++  G I F+ +         V  +  +  ++  K+++    +          
Sbjct: 7   ISGMVTDIKCLGKITFITVSHGAETFNIVATHGQAVGYDKLKNLKINDYI---------- 56

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
             TIN N   G  E+ A+++     + +  +P     +        Y  L          
Sbjct: 57  --TINTNQQNG--EIHAKELVGAEKSNKGVIPESANAK-------NYAIL---------- 95

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
                  +N +R      NF E   P +   + +G  D        +    A   +    
Sbjct: 96  -------LNQIRNYFYDNNFFEVRLPSIHPGNNKG--DIFEIDFFGKK---ARLSSSNAL 143

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
              +MA+   + + I  C+R E  ++ +   EF  L++       +D++  +   +  +F
Sbjct: 144 YSTVMAANMGKVYSIQRCYRAEPSKTSKHLSEFDMLEVSFVGHCFEDLICELSKFISDIF 203

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVN 321
              S           I  D        D P +    +  N     ++       + +S N
Sbjct: 204 NRVSK----------IIPDQIKALPFEDIPIVSYADL--NCKYGLLNKGLGKHEREISKN 251

Query: 322 PGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYI 359
               V   P+K    +    D    ++ +   PG+  +
Sbjct: 252 GPTTVIHFPSKISTWSALPIDDKYTYSLNFLAPGVGEV 289


>gi|282908772|ref|ZP_06316590.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282327036|gb|EFB57331.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
          Length = 259

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 53/149 (35%), Gaps = 21/149 (14%)

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              +Q +F  L Q+ Q Y +   A    + F   P FR E  ++ R   EF+ ++ EM+F
Sbjct: 1   KYFDQDAF--LSQSGQLYLEAA-AMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAF 57

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVS---------------NNFLRICYDDAIRRY-- 286
               + L   E  +  V +       +                  F RI YDDAI     
Sbjct: 58  TNHAESLEIQEQYVTHVVKSVLENCKLELKMLERDTSKLEKVATPFPRISYDDAIEFLKA 117

Query: 287 -GTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
            G D  +        + T    H +  VF
Sbjct: 118 EGFDDIEWGEDFGAPHETAIANHYDLPVF 146



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 31/194 (15%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE---- 433
            L +   E    +L+            D ++F            ++ G  +         
Sbjct: 83  KLELKMLERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHYD 142

Query: 434 -FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFE 490
              +I ++P                PF M       E++   DL++ + +         E
Sbjct: 143 LPVFITNYP------------TKIKPFYMQPNPENEETVLCADLIAPEGYG--------E 182

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R    E++ Q     G+     E  +       + G  PH G   G++R V  +
Sbjct: 183 IIGGSERVDDLELLEQRVKEHGLD----EEAYSYYLDLRRYGSVPHCGFGLGLERTVAWI 238

Query: 551 LGAKNVREVSLFPM 564
            G ++VRE + FP 
Sbjct: 239 SGVEHVRETAPFPR 252


>gi|304413224|ref|ZP_07394697.1| putative lysyl-tRNA synthetase [Candidatus Regiella insecticola
           LSR1]
 gi|304284067|gb|EFL92460.1| putative lysyl-tRNA synthetase [Candidatus Regiella insecticola
           LSR1]
          Length = 330

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 64/167 (38%), Gaps = 16/167 (9%)

Query: 132 DLRRDTLHKNIV--KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV--- 186
           DLR           KR RI+  +R      N +E  TP L+ ++      F   ++    
Sbjct: 6   DLRWRPSASIDHLKKRARILAKIRQFFAENNVMEVETPALSQATVTDIHLFPFQTQFIGP 65

Query: 187 --NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
               G    +  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      
Sbjct: 66  GAAAGLTLYMMTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAGCHHNP-EFTMLEWYRPGY 124

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           +   +++ ++ +L+ +               ++ Y  A  RY    P
Sbjct: 125 DMQKLIDEVDKLLQLIL--------CCKPAEQLSYQQAFIRYLEIDP 163



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 14/121 (11%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           +K +   H P    Q  +  +  +D     A ++++   G E+A+G      S    Q F
Sbjct: 212 DKPVFVYHYP--ASQSALARINPDDPR--VAERFEVYYKGIELANGFDELTDSAEQRQRF 267

Query: 509 SNVG-------ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
            N         ++   ++     L  A Q G+P   G+A G+DR++ML L AK + EV  
Sbjct: 268 ENENNQRVNLGLAPASIDE---NLIAALQHGLPACSGVALGVDRLIMLALNAKKISEVMA 324

Query: 562 F 562
           F
Sbjct: 325 F 325


>gi|301112569|ref|XP_002998055.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262112349|gb|EEY70401.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 270

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 4/118 (3%)

Query: 155 RMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM-ASGFDRY 213
              +  ++E  TP L   +     ++      +Q +  A  Q PQ YK +    +  +R 
Sbjct: 58  HFSSSYYVEIHTPKLVGGASVSGANYFTLKYFDQDATLA--QCPQTYKHMACDVASLERV 115

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTV 270
           F+I P FR E   + R   E   LD+EM+       +L   E  L  + +E  + +  
Sbjct: 116 FEIGPGFRAETSNTHRHMCELVGLDLEMTIKAHYHKVLTEKEKWLGRLIKEKYDTDFY 173


>gi|153213968|ref|ZP_01949161.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 1587]
 gi|124115538|gb|EAY34358.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 1587]
          Length = 349

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 65/166 (39%), Gaps = 16/166 (9%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSR 185
           D         + +R  ++  +R      N +E  TP ++ ++           +F+ P  
Sbjct: 30  DWMPTASISQLKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGY 89

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +GS   L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +
Sbjct: 90  A-KGSALYLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFTMLEWYRIGFD 147

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
              +++ M+ +L+ V            +  R+ Y +A        P
Sbjct: 148 HHALMDEMDALLQLVLR--------CGSAERMTYQEAFLNVLGVCP 185



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G          L  F      +  +
Sbjct: 239 FPASQAALAKINPADPR--VADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEM 296

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 297 GLTEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 345


>gi|325110859|ref|YP_004271927.1| hypothetical protein Plabr_4332 [Planctomyces brasiliensis DSM
           5305]
 gi|324971127|gb|ADY61905.1| Uncharacterized protein YjeA [Planctomyces brasiliensis DSM 5305]
          Length = 343

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 13/139 (9%)

Query: 132 DLRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS 190
           DL R     + +  R+R++   R    A  + E  TP+L+A   E   D  +      GS
Sbjct: 9   DLYRPAASLERLQARSRLVRETREFFHARGYWEVETPVLSA---ETVIDLHLDPFTADGS 65

Query: 191 F--------YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           F        + L  +P+   + L+ +G DR FQ+   FR  +      P EF  L+    
Sbjct: 66  FGLGSNEPTFFLQTSPEFAMKRLLTAGADRIFQVTRAFRQGEAGQLHNP-EFTILEWYAV 124

Query: 243 FVEQDDILNTMENVLRGVF 261
                D +  +E + R +F
Sbjct: 125 GETHFDQMAFVEQLCRHLF 143



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 6/124 (4%)

Query: 447 EEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           E  K+     + + + Q  +     +D     A +++L   G EI +G      +  + +
Sbjct: 221 ELAKRSAVFLHDYPVSQAALAQANPSDAR--VAERFELYLQGVEICNGYHELTDAAELRR 278

Query: 507 AFSNVGISKEVVE----NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                   +             L  A + GMP   G A G+DR++ML LG K +++V  F
Sbjct: 279 RNRRQNELRAEAGLPRLPENSRLLEAMEAGMPASSGTAVGLDRLLMLALGCKRLQDVLAF 338

Query: 563 PMSQ 566
           P+ +
Sbjct: 339 PVDR 342


>gi|322419667|ref|YP_004198890.1| lysyl-tRNA synthetase-like protein GenX [Geobacter sp. M18]
 gi|320126054|gb|ADW13614.1| lysyl-tRNA synthetase-related protein GenX [Geobacter sp. M18]
          Length = 303

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 13/148 (8%)

Query: 145 RTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
           R  I N +R     + ++E  TP  + A +PE                + +  +P+   +
Sbjct: 17  RGAIFNRVRAFFQEKGYLEVETPFRIPAPAPEA------QIDAIPSDGWFMQTSPELCMK 70

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            L+A+G+ R FQI  C+R+ +  S R   EF  L+   +  +   ++N  E +++     
Sbjct: 71  RLLAAGYPRIFQICRCWRNGERGS-RHLSEFTMLEWYRAEADYRVLMNETEALIKAAAAA 129

Query: 264 FSNGNTV-----SNNFLRICYDDAIRRY 286
                       +  + RI   DA RRY
Sbjct: 130 EKISYRGLQIDLALPWERITVADAFRRY 157



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 13/111 (11%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------V 511
           +      +  LK  D     A +++L   G EIA+              F          
Sbjct: 194 YPASCSALARLKAEDPS--VAERFELYIGGLEIANAFSELIDPVEQRARFEAEAAERAAQ 251

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G     +  +F         GMP   GIA G+DR+VM+LL A+++ +V  F
Sbjct: 252 GKHAYPMPEKFLAAL----AGMPEAAGIALGLDRLVMVLLDAESIDDVVAF 298


>gi|113461419|ref|YP_719488.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|170718955|ref|YP_001784121.1| lysyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|123132224|sp|Q0I4V7|SYK3_HAES1 RecName: Full=Uncharacterized protein YjeA
 gi|189082340|sp|B0USM2|SYK3_HAES2 RecName: Full=Uncharacterized protein YjeA
 gi|112823462|gb|ABI25551.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|168827084|gb|ACA32455.1| lysyl-tRNA synthetase-related protein GenX [Haemophilus somnus
           2336]
          Length = 323

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 13/128 (10%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
             E N  + K    ++ F   Q  +  +   D     A +++    G E+A+G      +
Sbjct: 197 LVEPNIGQNKPIAVYH-FPATQAALAQISSEDHR--VAERFEFYYKGIELANGFNELTDA 253

Query: 502 EVMLQAFSNVG-------ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           +     F+          + +  +++RF     A Q G+P   G+A G+DR++ML LGA+
Sbjct: 254 QEQEHRFNQDNRLREQLGLPQHEIDHRF---LGALQAGLPNTAGVALGVDRLIMLALGAE 310

Query: 555 NVREVSLF 562
           N+ EV  F
Sbjct: 311 NISEVISF 318



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 53/124 (42%), Gaps = 6/124 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-----RDFLVPSRVNQGSFYAL 194
           +N++ R +II  +R        +E  TP+L+                    + +     L
Sbjct: 14  QNLLARAKIIADIRRFFTERGLLEVETPVLSEFGVTDVHLSTFSTAFTSPFMEKSKTLWL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 74  TTSPEYHMKRLLAAGSGAIFQLCKVFRNEESGKKHNP-EFTMLEWYRPHFDMHRLINEVD 132

Query: 255 NVLR 258
           ++L+
Sbjct: 133 DLLQ 136


>gi|229524631|ref|ZP_04414036.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae bv. albensis
           VL426]
 gi|229338212|gb|EEO03229.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae bv. albensis
           VL426]
          Length = 324

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 66/166 (39%), Gaps = 16/166 (9%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSR 185
           D         + +R  ++  +R      N +E  TP ++ ++           +F+ PS 
Sbjct: 5   DWMPTASISQLKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPSY 64

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +GS   L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +
Sbjct: 65  A-KGSALHLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFTMLEWYRIGFD 122

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
              +++ M+ +L+ V            +  R+ Y +A        P
Sbjct: 123 HHALMDEMDALLQLVLR--------CGSAERMTYQEAFLNVLGVCP 160



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G          L  F      +  +
Sbjct: 214 FPASQAALAKINPADPR--VADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEM 271

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 272 GLTEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|119946883|ref|YP_944563.1| lysyl-tRNA synthetase-related protein GenX [Psychromonas ingrahamii
           37]
 gi|119865487|gb|ABM04964.1| lysyl-tRNA synthetase-related protein GenX [Psychromonas ingrahamii
           37]
          Length = 326

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 13/145 (8%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----------NQGSFYA 193
           R +I+ ++R   I    +E  TPIL+ +       F   +              QG+   
Sbjct: 15  RAKILQAIRHFFITRGLLEVETPILSQAGVTDIHLFCFQTHFMGPQISSSKPEAQGTPLY 74

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+++G    FQI+  FR+E+      P EF  L+      +   +++ M
Sbjct: 75  LQTSPEFHMKRLLSAGSGCIFQISKVFRNEESGRFHNP-EFTLLEWYRVGFDHFRLMDEM 133

Query: 254 ENVLRGVFE-EFSNGNTVSNNFLRI 277
           + +L+ + + E +   T  N FL +
Sbjct: 134 DQLLQFILKSETARRCTYQNAFLEV 158



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 452 IDFAHNP-----FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ 506
           +   H P     F   Q  +  +   D     A ++++   G E+A+G       +  L+
Sbjct: 205 VIAQHKPCFIYNFPASQAALARISPTD--KRVAERFEVYFQGIELANGFHELSDGQEQLR 262

Query: 507 AFSNVG-------ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
            F           +++  ++  F           P   G+A G+DR+VML    K++ +V
Sbjct: 263 RFQADNRLRSRKGLAQMPIDGNFISSLATL----PDCAGVALGVDRLVMLACEKKHIDDV 318

Query: 560 SLF 562
             F
Sbjct: 319 ISF 321


>gi|228933514|ref|ZP_04096366.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228826148|gb|EEM71929.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 65

 Score = 75.5 bits (184), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 28/59 (47%)

Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
                   K +  ++F      F+ G PPHGG   G++RI+  LL   NVRE S FP  
Sbjct: 1   MLLASFKEKGLHPDKFQSYLNTFRYGCPPHGGFGIGLERILYKLLELSNVREASAFPRD 59


>gi|90413347|ref|ZP_01221340.1| lysyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90325589|gb|EAS42058.1| lysyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 323

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 65/162 (40%), Gaps = 24/162 (14%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF-------- 191
           K + +R  +++S+R     +  IE  TP ++ ++        V     Q  F        
Sbjct: 12  KQLKQRAAVLSSIRNFFAGKGVIEVDTPAMSQATVTD-----VHLHTFQTEFVGPGFAGG 66

Query: 192 --YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               +  +P+ + + L+++G    +QI   FR+E+      P EF  L+      +  D+
Sbjct: 67  QTLYMMTSPEFHMKRLLSAGSGPIYQICKSFRNEESGRYHNP-EFTMLEWYRPDFDHHDL 125

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           +N M+ +L+ V +         +   R+ Y  A  +     P
Sbjct: 126 MNEMDELLQLVLQ--------CDKAERMSYQQAFIQVLGVCP 159



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 71/212 (33%), Gaps = 28/212 (13%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L  +  + D++  ++      + L +   E    +L             DP +       
Sbjct: 132 LLQLVLQCDKAERMSYQQAFIQVLGVCPLEGTMDQLKGVARTLGLADIADPEQDRDTLLQ 191

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
               I  E  I         ++ DFP                     Q  +  +   D  
Sbjct: 192 LLFSIGVEGEI---GLQAPAFVYDFP-------------------ASQAALAQINSTDNR 229

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQC 531
              A ++++   G E+A+G       +  L  F    I +  +    +     L  A + 
Sbjct: 230 --VAERFEVYFKGIELANGFHELANGDEQLVRFEQDNIKRIHMGLKPQPIDLHLIEALRA 287

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G P   G+A GIDR++ML L   ++ +V+ FP
Sbjct: 288 GFPDCAGVALGIDRLIMLALKLDHIDQVTAFP 319


>gi|8928399|sp|Q9ZIY0|SYK3_HAEGA RecName: Full=Uncharacterized protein YjeA
 gi|4101633|gb|AAD01242.1| lysyl-tRNA synthetase homolog [Avibacterium paragallinarum]
          Length = 322

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 14/121 (11%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG-------IRNHMS 501
           +K +   H P T  Q  +  +   D     A +++    G E+A+G         + H  
Sbjct: 204 DKPVAIYHFPAT--QAALAQISSEDHR--VAERFEFYYKGLELANGFCELTDANEQRHRF 259

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E   +    +G+    ++ RF     A + G+P   G+A G+DR++M+ LG +N+ EV  
Sbjct: 260 EQDNKQRERLGLPIHQIDERF---LAALKAGVPNCSGVALGVDRLIMIALGLENINEVIA 316

Query: 562 F 562
           F
Sbjct: 317 F 317



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 67/175 (38%), Gaps = 23/175 (13%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---------QGSFYALP 195
           R +II  +R        +E  TPIL+    E     +  S  +         +     L 
Sbjct: 18  RAKIIAEIRQFFSERGLLEVETPILS----EFGVTDVHLSTFSTKLISPFQKKEKTLWLS 73

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+   + L+++G    FQ+   FR+E+      P EF  L+    + +   ++N +++
Sbjct: 74  TSPEYPMKRLLSAGSGAIFQLCKVFRNEEAGKKHSP-EFTMLEWYRPYFDMYRLINEVDD 132

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRRY-GTDKPDLRNPIIMHNVTEHFVHS 309
           +L+ + +              + Y  A + Y G D        ++    E+ + +
Sbjct: 133 LLQYILD--------CEPAESMSYQFAFQEYVGIDPLSASQDKLIEKAKEYCLEN 179


>gi|294634441|ref|ZP_06712977.1| lysyl-tRNA synthetase GenX [Edwardsiella tarda ATCC 23685]
 gi|291092151|gb|EFE24712.1| lysyl-tRNA synthetase GenX [Edwardsiella tarda ATCC 23685]
          Length = 325

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 57/128 (44%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYAL 194
            N++KR  I+ ++R        +E  TP ++ ++          +        QG    L
Sbjct: 14  ANLLKRASIMATIRRFFSDRGVLEVDTPSMSQATITDVHLVPFQTHFVGPGVAQGMTLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAAGSGPIYQLCRSFRNEESGRYHNP-EFTMLEWYRPHYDMYRLMNEVD 132

Query: 255 NVLRGVFE 262
           ++L+ V E
Sbjct: 133 DLLQQVLE 140



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 7/116 (6%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +  F ++ F   Q  +  +   D     A ++++   G E+A+G      ++     F  
Sbjct: 208 RPAFVYH-FPASQASLAQISTEDHR--VAERFEVYYRGVELANGFHELTDADEQRLRFEQ 264

Query: 511 VGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               +       +     L  A   GMP   G+A G+DR++ML L A+ + EV  F
Sbjct: 265 DNRKRAALGLPQQPLDEHLLAALAHGMPDSSGVALGVDRLIMLALSAERLSEVIAF 320


>gi|289811882|ref|ZP_06542511.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 52

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPK 596
             LL G  N+R+V  FP +     L+  +PS  +   L ELG+++V+  +
Sbjct: 1   TSLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKKAE 50


>gi|94267110|ref|ZP_01290746.1| tRNA synthetase, class II (G, H, P and S):tRNA synthetase, class II
           (D, K and N) [delta proteobacterium MLMS-1]
 gi|93452181|gb|EAT02845.1| tRNA synthetase, class II (G, H, P and S):tRNA synthetase, class II
           (D, K and N) [delta proteobacterium MLMS-1]
          Length = 310

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 8/113 (7%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGSFYALPQA 197
             N+  R  +I ++R      +++E  TP+L  + +PE     L+P R  +   + L  +
Sbjct: 1   MHNLWLRAAMIRAIRRFFEQRHYLEVETPLLIPAPAPE---PHLLPQRAGK---WFLQTS 54

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           P+   + L+A G  R +QI  CFR  +     LP EF  L+   +  +  D++
Sbjct: 55  PEICMKRLLARGIPRIYQICKCFRRRERGRRHLP-EFTMLEWYRAGADYHDLM 106



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 6/122 (4%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E     ++  F H+ +    G +  L  ++     A +++L   G E+A+G    +    
Sbjct: 187 EPRLGRQRPTFLHD-YPAELGALARLSPHNP--AVAERFELYIAGIELANGFSELNDPVE 243

Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQ---CGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
               F+    +      R   L R F      MPP  GIA GIDR+ M   GA+++ ++ 
Sbjct: 244 QQCRFTRDRAAIRAAGRRPPPLPRRFLEELHAMPPAAGIALGIDRLAMFFAGAESIDQLQ 303

Query: 561 LF 562
            F
Sbjct: 304 AF 305


>gi|68076563|ref|XP_680201.1| asparagine--t RNA ligase [Plasmodium berghei strain ANKA]
 gi|56501100|emb|CAH97288.1| asparagine--t RNA ligase, putative [Plasmodium berghei]
          Length = 646

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 64/199 (32%), Gaps = 36/199 (18%)

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
           +  ++ + +     +  L  R          ++ +I          N+   +TPILT++ 
Sbjct: 275 MISKKYHTKEYLRNFPHLRGRTKLYSSIFRLKSDLIIETFNYFKKNNYTYINTPILTSND 334

Query: 174 PEGARDFLVPS-----------------------------RVNQGSFYALP---QAPQQY 201
            EG  +    +                                +  F+  P       Q 
Sbjct: 335 CEGGGELFHVTTSPNKNKKAEIDTENINFINEKNNNFDKKNSEKKQFFKKPCYLNVSSQL 394

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL----NTMENVL 257
               +       F I   FR E+  + R   EF  L++E++F   ++I+      ++ ++
Sbjct: 395 ALECLCCSIGDVFTINQSFRAENSNTSRHLSEFLMLEVELAFSNLNNIIFESEKYIKEMI 454

Query: 258 RGVFEEFSNGNTVSNNFLR 276
             V  +  +   ++ +  +
Sbjct: 455 NFVLCKSEDIEYINEHHDQ 473



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           PF M        K ND     +    +  N  EIA G  R     ++        ++   
Sbjct: 545 PFYM--------KLNDDKKTVSCMDIIFPNVGEIAGGSERETNLNILKDQMKKNKLNI-- 594

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             + +       + G  PH G   GIDR++M +L   N+R++  FP   N
Sbjct: 595 --DLYNPYLELRKYGNIPHSGFGLGIDRLIMYILSMSNIRDIVPFPRYPN 642


>gi|262273028|ref|ZP_06050847.1| lysyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262222938|gb|EEY74244.1| lysyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 323

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 68/166 (40%), Gaps = 14/166 (8%)

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-----RDFLVPSR 185
           L+ R     + +  R R++N +RC     +  E  TP ++ ++         +   V   
Sbjct: 3   LEWRPTAEIETLKARARLVNDIRCFFAERDVWEVDTPAMSQATVTDVHLHTFKTDFVGPG 62

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +G    +  +P+ + + L+A+G    +QI   FR+E+   +  P EF  L+      +
Sbjct: 63  FAKGIPLYMMTSPEFHMKRLLAAGSGAIYQINKAFRNEEAGRNHNP-EFTMLEWYRPGFD 121

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
              +++ M+ +L+ V            N  R+ Y +A  +     P
Sbjct: 122 HHALMDEMDALLQRVL--------GVKNAERMTYQEAFIKVLGVCP 159



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +  ND     A ++++   G E+A+G      +   L  F      +E +
Sbjct: 213 FPASQAALARVCENDNR--VAARFEVYFKGIELANGFYELDDANEQLARFEEDNRKREKM 270

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A G+DR++ML L   ++ +V  FP
Sbjct: 271 GLQPQPIDHHLIDALRHGLPECAGVALGVDRLIMLALDKAHIDDVIAFP 319


>gi|114319846|ref|YP_741529.1| tRNA synthetase, class II (D, K and N) [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226240|gb|ABI56039.1| tRNA synthetase, class II (D, K and N) [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 314

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 67/190 (35%), Gaps = 31/190 (16%)

Query: 378 HLNIVNTEAIRVRLDMQDGDS-CFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW 436
              +   +A    L  + GD       G+          +R  +A  LG        F  
Sbjct: 148 FAGLDPFQAPLDVLRARGGDKGLTAALGEDRDAWLDLILSR-EVAPRLG---RGRLSFL- 202

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
             DFP                     Q  +  L+  D     A +++L   G EIA+G  
Sbjct: 203 -TDFP-------------------ASQAALARLRPGDPP--VAERFELFMEGMEIANGYH 240

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
                    + F     +++    R      L  A + G+PP  G+A G+DR+VM+ LGA
Sbjct: 241 ELADPAEQRRRFRAEQQARDARGERLPVDQRLLAALEAGLPPCAGVALGVDRLVMVALGA 300

Query: 554 KNVREVSLFP 563
           + +  V  FP
Sbjct: 301 ECIDAVWAFP 310



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 7/123 (5%)

Query: 155 RMIAENFIECSTPIL-TASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
                  +E  TP++ TA + +   D L  SR + G    L  +P+   + L+A+G    
Sbjct: 26  FFDRRGLLEVETPLMATAPAMDPNLDSLAVSRPD-GCPAWLQTSPEYAMKRLLAAGSGDI 84

Query: 214 FQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN 273
           +Q+   FR  +      P EF  L+      +   ++      +  +  E +    V + 
Sbjct: 85  WQLTRAFRGSERGRLHNP-EFTLLEWYRVGWDHHALM----QEVAELAAELAGERPVEHW 139

Query: 274 FLR 276
             R
Sbjct: 140 TYR 142


>gi|13541490|ref|NP_111178.1| asparagine synthetase A [Thermoplasma volcanium GSS1]
 gi|14324874|dbj|BAB59800.1| tRNA synthetase Asn [Thermoplasma volcanium GSS1]
          Length = 314

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 74/218 (33%), Gaps = 24/218 (11%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            L +  L + +   + + + +   +    FIE    I++  +         P       +
Sbjct: 16  HLEKPELQRALKIESSVRSYLSDYLKGRGFIEVPPVIISVLT----DPLNHPVYDPTIDY 71

Query: 192 YALPQAPQ---QYKQLLMASGFDRYFQIAPCFRDEDPR---SDRLPGEFYQLDMEMSFVE 245
           Y    +      + + ++   F + F  +P  R E+     + R   EF QLD+E+    
Sbjct: 72  YGYKYSITKSMIFHKHILTKHFGKIFTFSPNIRLEEEDKAETGRHLSEFTQLDLEIRDAT 131

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
           ++D+++  E ++  +F +    ++    F           +G D    + P       + 
Sbjct: 132 REDVMSLGEEMIVELFSKIKKTHSDDLKF-----------FGRDLRIPKKPFERIRYKDA 180

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
                   F  ILS       W I        R F DR
Sbjct: 181 EKEYGGD-FESILSKEKKEPFWIIDIP--LEKREFYDR 215



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 58/199 (29%), Gaps = 28/199 (14%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNH-IAQELG-----IINCNCF 432
           L       +  ++     D   F   D           R     +E G     I++    
Sbjct: 138 LGEEMIVELFSKIKKTHSDDLKFFGRDLRIPKKPFERIRYKDAEKEYGGDFESILSKEKK 197

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           E  WI+D P  E  E           F   +         D+  +    +     G  ++
Sbjct: 198 EPFWIIDIPL-EKRE-----------FYDREDPQRPGILVDMDLVYPEGF-----GEALS 240

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G     +  ++ +        K   E +F       + G+ P  G   GI+R+   + G
Sbjct: 241 GGEREYKLDRIIERIHK-----KRQTEEQFKWYIEFAKDGLYPSAGFGIGIERLTRYICG 295

Query: 553 AKNVREVSLFPMSQNFCDL 571
              + +V  FP       L
Sbjct: 296 LSRIEDVHPFPKVPGKLSL 314


>gi|261254134|ref|ZP_05946707.1| lysyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260937525|gb|EEX93514.1| lysyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 323

 Score = 75.1 bits (183), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 62/158 (39%), Gaps = 16/158 (10%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYA 193
             + +R  I+  +R      + +E  TP ++ ++           +F+ P   +    Y 
Sbjct: 12  FQLRQRADIVAKIRQFFAQRDVLEVDTPAMSHATVTDIHLHTFQTEFVGPGYADGRKLYF 71

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  +P+ + + L+A+G    +QI   FR+E+      P EF  L+      +   +++ M
Sbjct: 72  M-TSPEFHMKRLLAAGSGCIYQINKAFRNEESGRYHNP-EFTMLEWYRVGFDHHKLMDEM 129

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           + +L+ V +             R+ Y  A        P
Sbjct: 130 DALLQLVLQ--------CGEAERMSYQQAFMNVLGVCP 159



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 75/234 (32%), Gaps = 37/234 (15%)

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
           G  +    D M+          L  +  +  E+  ++        L +   E     L  
Sbjct: 119 GFDHHKLMDEMD---------ALLQLVLQCGEAERMSYQQAFMNVLGVCPLEGSMAELKT 169

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
                      +P +           I  E  I         ++ DFP            
Sbjct: 170 VAATLGLSDIAEPEQDRDTLLQLLFSIGVENKI---GQHVPAFVYDFP------------ 214

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
                    Q  +  +   D     A ++++   G E+A+G       +  L  F +   
Sbjct: 215 -------ASQAALAKINPQDSR--VADRFEVYFKGIELANGFHELDNPQEQLNRFESDNA 265

Query: 514 SKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  +    +     L  A Q G+P   G+A GIDR++ML +G  ++ +V+ FP
Sbjct: 266 KRIEMGLAPQPIDHHLIAALQSGLPECAGVALGIDRLIMLAIGCDHIDQVTAFP 319


>gi|15642650|ref|NP_232283.1| lysyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587927|ref|ZP_01677682.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 2740-80]
 gi|121727606|ref|ZP_01680714.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae V52]
 gi|147673524|ref|YP_001218145.1| lysyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153819799|ref|ZP_01972466.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae NCTC 8457]
 gi|153821548|ref|ZP_01974215.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae B33]
 gi|227082771|ref|YP_002811322.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae M66-2]
 gi|254851191|ref|ZP_05240541.1| lysyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|298500526|ref|ZP_07010330.1| lysyl-tRNA synthetase GenX [Vibrio cholerae MAK 757]
 gi|9657247|gb|AAF95796.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121547832|gb|EAX57918.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 2740-80]
 gi|121630097|gb|EAX62502.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae V52]
 gi|126509660|gb|EAZ72254.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae NCTC 8457]
 gi|126520933|gb|EAZ78156.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae B33]
 gi|146315407|gb|ABQ19946.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae O395]
 gi|227010659|gb|ACP06871.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae M66-2]
 gi|227014543|gb|ACP10753.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae O395]
 gi|254846896|gb|EET25310.1| lysyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297540695|gb|EFH76752.1| lysyl-tRNA synthetase GenX [Vibrio cholerae MAK 757]
          Length = 349

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 67/178 (37%), Gaps = 16/178 (8%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSR 185
           D         + +R  ++  +R      N +E  TP ++ ++           +F+ P  
Sbjct: 30  DWMPTASISQLKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGY 89

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +GS   L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +
Sbjct: 90  A-KGSALHLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFTMLEWYRIGFD 147

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
              +++ M+ +L+ V            +  R+ Y +A        P       +  V 
Sbjct: 148 HHALMDEMDALLQLVLR--------CGSAERMTYQEAFLNVLGVCPLEEEMRELKQVA 197



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 63/189 (33%), Gaps = 33/189 (17%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
           L     E  +V   +   D       +P +           I  E  I         ++ 
Sbjct: 186 LEEEMRELKQVAATLGLSDI-----AEPEEDRDTLLQLLFSIGIEPKI---GQITPAFVY 237

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           DFP                     Q  +  +   D     A ++++   G E+A+G    
Sbjct: 238 DFP-------------------ASQAALAKINPADPR--VADRFEVYFKGIELANGFHEL 276

Query: 499 HMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
                 L  F      +  +    +     L  A + G+P   G+A GIDR++ML LG  
Sbjct: 277 DNPAEQLARFKADNAKRLEMGLTEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGED 336

Query: 555 NVREVSLFP 563
           ++ +V+ FP
Sbjct: 337 HIDKVTAFP 345


>gi|238595914|ref|XP_002393908.1| hypothetical protein MPER_06285 [Moniliophthora perniciosa FA553]
 gi|215462078|gb|EEB94838.1| hypothetical protein MPER_06285 [Moniliophthora perniciosa FA553]
          Length = 155

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                +F A  Q+PQ  KQ+ +A+ F+R ++I P FR ED  + R   EF  LD+EM+  
Sbjct: 1   YFKGNAFLA--QSPQLAKQMCIAADFERVYEIGPVFRAEDSNTHRHLTEFMGLDLEMAIE 58

Query: 245 EQ-DDILNTMENVLRGVFE 262
           E   +++  ++ +   +F 
Sbjct: 59  EHYHEVMELLDGLFISIFR 77


>gi|258614516|ref|ZP_05712286.1| lysyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 56

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 31/55 (56%)

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +  +           A + GMPP GG+  GIDR+VMLL  A+++R+V LFP  +
Sbjct: 2   ELGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 56


>gi|62988667|gb|AAY24055.1| unknown [Homo sapiens]
          Length = 188

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 50/141 (35%), Gaps = 19/141 (13%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDH----YGITQVVANPDSACFEIAKSVR 66
           DL +      V +   VH  R  G   FL +R        +  V  +      + A ++ 
Sbjct: 50  DLTIQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVKFAANIN 109

Query: 67  SEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE--------- 117
            E ++ ++G+V  R       +     +EL  QKI ++S+AE        +         
Sbjct: 110 KESIVDVEGVV--RKVNQKIGSCTQQDVELHVQKIYVISLAEPRLPLQLDDAVRPEAEGE 167

Query: 118 ----REYPESIRFKYRFLDLR 134
                   +  R   R +DLR
Sbjct: 168 EEGRATVNQDTRLDNRVIDLR 188


>gi|323498097|ref|ZP_08103101.1| poxB regulator PoxA [Vibrio sinaloensis DSM 21326]
 gi|323316808|gb|EGA69815.1| poxB regulator PoxA [Vibrio sinaloensis DSM 21326]
          Length = 323

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 64/157 (40%), Gaps = 16/157 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYAL 194
            + +R ++IN +R      + +E  TP ++ ++           +F+ P   +    Y +
Sbjct: 13  QLRQRAKLINQIRHFFAERDVLEVDTPAMSHATVTDIHLHTFQTEFVGPGYADGSKLYFM 72

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    +QI   FR+E+      P EF  L+         ++++ M+
Sbjct: 73  -TSPEFHMKRLLAAGSGCIYQINKAFRNEENGRYHNP-EFTMLEWYRVGFTHHNLMDEMD 130

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            +L+ V            +  R+ Y  A        P
Sbjct: 131 KLLQLVL--------ACGDAERMTYQQAFINVLGVCP 159



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G      +   L+ F      +  +
Sbjct: 213 FPASQAALAKINLEDDR--VADRFEVYFKGIELANGFHELDDANEQLKRFQQDNSKRIEM 270

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML +G  ++ +V+ FP
Sbjct: 271 GLDPQPIDHHLIAALESGLPECAGVALGIDRLIMLAIGCDHIDQVTAFP 319


>gi|223999631|ref|XP_002289488.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220974696|gb|EED93025.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 343

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 76/229 (33%), Gaps = 30/229 (13%)

Query: 341 CDRMNEWARSQGQPGLAYIFWRLDESGN--VAGMGPVAKHLNIVNTEAIRVR--LDMQDG 396
            D + + A    +  + Y F + DE      + M P               R  + ++  
Sbjct: 131 LDTLIDQAERFVKYVIGYAFDKCDEDFEFLESRMAPTDMKPTRDLLRECLDRPFVRIKHY 190

Query: 397 DSCFFIAG-DPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
           D+   I   +   F          I  +          F ++  +P         KI   
Sbjct: 191 DAIALIQKLEFPSFDDDLGSEHEKILVQYFGYMAEFGAFVFVTHWPL--------KIKS- 241

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGIS 514
              F M Q            S +   +DL+C    E+  G +R    + + +     G+ 
Sbjct: 242 ---FYMAQVDD--------GSGECLSFDLLCPRVGELFGGSMREWRFDKLDEEIKRRGMD 290

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              ++          + G  PHGG   G DR+ ML+ G ++VR+V  FP
Sbjct: 291 VSPIQ----WFLDLRKSGSCPHGGWGMGFDRLCMLVCGVQSVRDVVPFP 335



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 60/156 (38%), Gaps = 11/156 (7%)

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV- 186
           YRF   R          R+++  ++   M  E+       I+T S  EGA +    S + 
Sbjct: 10  YRF---RAQASQSVFRIRSKLDMAVHLFMDREDVQLTDPNIMTVSDCEGAGETFSVSPLM 66

Query: 187 ----NQGSFY--ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
               ++G+     L  + Q   +  +  GF + +     FR E   + +   EF  ++ E
Sbjct: 67  FSKDSEGNDLKVGLTVSSQLPLEASIC-GFRQVYTCQKSFRAEKSDTAKHLAEFTHVEYE 125

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            +F+  D +++  E  ++ V     +       FL 
Sbjct: 126 GAFMSLDTLIDQAERFVKYVIGYAFDKCDEDFEFLE 161


>gi|90416987|ref|ZP_01224916.1| lysyl-tRNA synthetase-related protein [marine gamma proteobacterium
           HTCC2207]
 gi|90331334|gb|EAS46578.1| lysyl-tRNA synthetase-related protein [marine gamma proteobacterium
           HTCC2207]
          Length = 318

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 54/126 (42%), Gaps = 4/126 (3%)

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYALP 195
           T    + +R+R+++ +R        IE   P+L+ ++      D +        ++  L 
Sbjct: 11  TSMAILRQRSRVLSELRNFFQQRQVIEVDVPLLSRATVTDQNIDSIQAHNAETDAY--LQ 68

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ASG    + +   FR+ +    R   EF  L+      ++  +++ +  
Sbjct: 69  TSPEYFMKRLLASGSGDIYSLGKAFREAESG-RRHNPEFTLLEWYRCGWDEHQLMDEVAE 127

Query: 256 VLRGVF 261
           ++  + 
Sbjct: 128 LIAVLL 133



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 6/125 (4%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
             E   E+  +     P    Q  +     +      + +++   N  E+A+G      +
Sbjct: 191 LIEPQLEDGLVLVYDYP--ACQAALAKCAEDSQGRQISRRFEGFLNRVELANGYCELTDA 248

Query: 502 EVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
                 F+     + + +         L  A + G+P   G+A G+DR++M L GA ++ 
Sbjct: 249 AEQADRFAEDQRQRRLSDKAAVTADQRLLAAMESGLPECAGVALGVDRLLMQLQGADSID 308

Query: 558 EVSLF 562
           +V  F
Sbjct: 309 QVMPF 313


>gi|11691631|emb|CAC18673.1| putative Lysyl-tRNA synthetase [Erwinia chrysanthemi]
          Length = 137

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 7/114 (6%)

Query: 453 DFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG 512
            F ++ F   Q  +  +   D     A ++++   G E+A+G      S+   Q F    
Sbjct: 22  AFVYH-FPATQAALAEISTEDHR--VAERFEVYYKGIELANGFCELTDSKEQRQRFEQDN 78

Query: 513 ISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             +      V+     L  A + G+PP  G+A G+DR+VM+ L A+++ EV  F
Sbjct: 79  RKRAARGLPVQPIDENLLAALEAGIPPCSGVALGVDRLVMMALNAESIGEVMAF 132


>gi|289812213|ref|ZP_06542842.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 134

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 42/121 (34%), Gaps = 5/121 (4%)

Query: 17  VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDG 75
           V   V + GWV   R    GI FL + D      V A  +++     + V    +    G
Sbjct: 16  VDQEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEEV----LHLTTG 71

Query: 76  LVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRR 135
             +  + + + +       E+ A K+E+    E+        + +      +   L  R 
Sbjct: 72  CSVVVTGKVVASPGQGQSFEIQATKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRT 131

Query: 136 D 136
           +
Sbjct: 132 N 132


>gi|218883748|ref|YP_002428130.1| tRNA synthetase, class II (D, K and N) [Desulfurococcus
           kamchatkensis 1221n]
 gi|218765364|gb|ACL10763.1| tRNA synthetase, class II (D, K and N) [Desulfurococcus
           kamchatkensis 1221n]
          Length = 388

 Score = 74.7 bits (182), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 72/190 (37%), Gaps = 10/190 (5%)

Query: 96  LSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155
           L  +  ++L    E             +   +   + +RR  + + +   + ++ +MR  
Sbjct: 65  LKVKDFKVLHKPLEPAKICVDNVPLDPAEYVRNYPIYIRRPEILRVVKTYSIVLRTMRRI 124

Query: 156 MIAENFIECSTPILT-ASSPE--GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
           +    F E   PI+   S P   GA   +V      G  Y +  +   YKQ L AS  ++
Sbjct: 125 LDEHGFTELPAPIIGYVSDPGLRGAEKAIVKIY---GETYEVQSSVIMYKQ-LYASLLEK 180

Query: 213 YFQIAPCFRDEDP---RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
            + +A   R E P    + R   EF Q+D+E S     D++   E  L        N  +
Sbjct: 181 IYYVARNLRIEPPENMYTGRHLVEFTQVDVEASITTASDMMRLAEETLYKTVRYMLNHYS 240

Query: 270 VSNNFLRICY 279
               + ++ +
Sbjct: 241 ELLTYDQVDF 250


>gi|120555692|ref|YP_960043.1| lysyl-tRNA synthetase-related protein GenX [Marinobacter aquaeolei
           VT8]
 gi|120325541|gb|ABM19856.1| lysyl-tRNA synthetase-related protein GenX [Marinobacter aquaeolei
           VT8]
          Length = 322

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 10/92 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG-------ISKEVVENRFGGLYRAFQC 531
           A +++L  +G E+ +G             F+            +  ++  F     A + 
Sbjct: 230 AHRFELYIHGLELCNGYWELTDPAEQRARFAADNHLRRASGKPEMALDESF---LAALET 286

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+P   G+A G+DR++ML LG++N+++V  FP
Sbjct: 287 GLPECAGVAMGLDRLLMLKLGSRNIQDVIAFP 318



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 3/123 (2%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA--LPQ 196
              +  R +++  +R        +E  TP+L            +PS V+ G      L  
Sbjct: 13  RAALESRAQLLAHVRGFFSERRVLEVETPVLGRHGVTDVNLDGIPSEVDAGGVQGGWLQT 72

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+ + + L+A+G    FQIA  FR+ + R  R   EF  L+      +   ++  + ++
Sbjct: 73  SPEYHMKRLLAAGSGSIFQIARVFRNGE-RGKRHNPEFSMLEWYRVGFDDQQLMREVSDL 131

Query: 257 LRG 259
           + G
Sbjct: 132 VCG 134


>gi|219362779|ref|NP_001137009.1| hypothetical protein LOC100217176 [Zea mays]
 gi|194697970|gb|ACF83069.1| unknown [Zea mays]
          Length = 219

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 4/102 (3%)

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           ++ ND     A    LV    E+  G  R    + +        ++K      +      
Sbjct: 121 MRENDDGKTVAAMDLLVPRVGELIGGSQREERLDYLEARLDEQNLNK----ESYWWYLDL 176

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            + G  PH G   G +R+V    G  N+R+   FP      +
Sbjct: 177 RRYGSVPHAGFGLGFERLVQFATGMDNIRDTIPFPRVPGSAE 218


>gi|154281359|ref|XP_001541492.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150411671|gb|EDN07059.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 569

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 101/331 (30%), Gaps = 44/331 (13%)

Query: 21  VRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPD--SACFEIAKSVRSEWVLCIDGLV 77
           V + G +   R  G  +IFLD+  +    QV+ N     +     +  +  + L   G V
Sbjct: 164 VVIYGRIQSARIAGSKLIFLDLVQNGRKVQVLCNQRHLDSLGVTPEKFKQFYHLLRRGDV 223

Query: 78  MSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY-------RF 130
            S        +               LSVA      +     +   +R KY       R 
Sbjct: 224 FSVIGHPHRTSRRE------------LSVAASQLPKLITPCLHDVPLRMKYQESSPYDRH 271

Query: 131 LDLR-RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG 189
           + L    T    +  R+ +I  +R   +  +F+E  TPIL  +S  G  D          
Sbjct: 272 VQLLYSPTAADILRARSSVIQYIRSFFLDRSFMEVETPIL--ASVAGGLDKTHNPEFTTC 329

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF--YQLDMEMSFVEQD 247
            FY               +  +    +   F     R      E          SF    
Sbjct: 330 EFY------------HAFADLETLITLTESFFTGLDRHIHHLNETLETLSPTTTSFATPF 377

Query: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN-PIIMHNVTEHF 306
             L+ + ++   +  +  +  T               +     P   N P ++  ++  +
Sbjct: 378 RRLDFIPDLETAMCHKLPDFTTTPTEEATKTVIQLFEQLSHPLPTNPNLPRLLDRLSAIY 437

Query: 307 VHSEFR----VFSKILSVNPGYEVWAIPAKG 333
           +  + +    + +    ++P  + +  PA G
Sbjct: 438 LEPQCKDPTFIVNHPECLSPLSKSFTHPACG 468



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 4/92 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN---VGISKEVVENRFG-GLYRAFQ 530
               A + +L  +  E+ +     +      + F       +     E +      +A Q
Sbjct: 468 GQTVAARAELFIDQREVVNMYEEENSPFEQRRKFEIQLGFQVPAVEAEGKMDENYLQALQ 527

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            G+PP GG   G+DR+ ML  GA+ + +V  F
Sbjct: 528 WGLPPTGGWGCGVDRLCMLFTGARRIGDVLSF 559


>gi|160872441|ref|ZP_02062573.1| putative lysyl-tRNA synthetase (Lysine--tRNA ligase)(LysRS) (GX)
           [Rickettsiella grylli]
 gi|159121240|gb|EDP46578.1| putative lysyl-tRNA synthetase (Lysine--tRNA ligase)(LysRS) (GX)
           [Rickettsiella grylli]
          Length = 326

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 65/174 (37%), Gaps = 16/174 (9%)

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFY--- 192
           T    +  R +++ ++R      + +E  TP+L+ ++  +              + Y   
Sbjct: 12  TTLALLHLRAKLLKNIRHFFSERHVLEVETPLLSHATVTDPHLHSFQTHYYFDNAHYQQT 71

Query: 193 -ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  +P+   + L+A+G    +QI+  FR+          EF  L+      +   +++
Sbjct: 72  LYLQTSPEFAMKRLLAAGSGPIYQISKAFRNHGESGCYHNPEFTLLEWYRPDYDHHQLMD 131

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
            ++ +L+ +            +  R  Y +  + Y    P     + + N+ E 
Sbjct: 132 EVDALLKQLL--------SCESAERFSYAEIFQYYLNCNPH---ELTLKNLKEL 174



 Score = 57.4 bits (137), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 10/92 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVM-------LQAFSNVGISKEVVENRFGGLYRAFQC 531
           A ++++   G E+A+G    + ++         L    N   +K  ++  F     A   
Sbjct: 234 AERFEVYWKGIELANGFHELNDADEQRLRFMNDLSVRDNYHYTKVPIDEYF---LAALTH 290

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+P   G+A GIDR+++LL   K + +V  FP
Sbjct: 291 GLPDCAGVALGIDRLLLLLTQMKKISDVISFP 322


>gi|153829478|ref|ZP_01982145.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 623-39]
 gi|254285847|ref|ZP_04960809.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae AM-19226]
 gi|148875061|gb|EDL73196.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 623-39]
 gi|150424029|gb|EDN15968.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae AM-19226]
          Length = 349

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 65/166 (39%), Gaps = 16/166 (9%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSR 185
           D         + +R  ++  +R      N +E  TP ++ ++           +F+ P  
Sbjct: 30  DWMPTASISQLKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGY 89

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +GS   L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +
Sbjct: 90  A-KGSALHLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFTMLEWYRIGFD 147

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
              +++ M+ +L+ V            +  R+ Y +A        P
Sbjct: 148 HHALMDEMDALLQLVLR--------CGSAERMTYQEAFLNVLGVCP 185



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G          L  F      +  +
Sbjct: 239 FPASQAALAKINPADPR--VADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEM 296

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 297 GLTEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 345


>gi|254498592|ref|ZP_05111312.1| lysyl tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254352183|gb|EET10998.1| lysyl tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 313

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 6/122 (4%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL--VPSRVNQGSFYALPQAPQQ 200
            +R ++I ++R       ++E  TPI+      G  D          + + Y L  +P+ 
Sbjct: 12  RQRAQLIATIRDFFNGRGYLEVDTPIMARY---GTTDVYLSNIKATFRDAHYCLQTSPEY 68

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           + + L+A+G    FQ+A  FRD++      P EF  L+     ++   ++  M+  L+ V
Sbjct: 69  HMKRLLAAGSGPIFQLARVFRDDELGRWHNP-EFTLLEWYQLGIDHHALMAEMDLFLQAV 127

Query: 261 FE 262
            +
Sbjct: 128 MQ 129



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 51/138 (36%), Gaps = 15/138 (10%)

Query: 440 FPFYEWNEEEKKIDFAHN---PFTMPQGGMESLKGNDLLSI--------KAFQYDLVCNG 488
           FP  E + ++       +   PF   +    ++                 A ++++   G
Sbjct: 171 FPPEEHDRDQYLFLLMSHIVEPFLGKESAPVAVYNFPSSQAALAKINAGVAERFEIYYQG 230

Query: 489 FEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGID 544
            E+A+G      ++   Q F+     ++            L +A + G+P   G+A GID
Sbjct: 231 VELANGFHELTDADAQAQRFAQDLHLRQEKGFPAVEADHYLLQALKHGLPACSGVALGID 290

Query: 545 RIVMLLLGAKNVREVSLF 562
           R++ + L    +  V  F
Sbjct: 291 RLLAIALKQSAIANVISF 308


>gi|254225395|ref|ZP_04919006.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae V51]
 gi|125622029|gb|EAZ50352.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae V51]
          Length = 349

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 65/166 (39%), Gaps = 16/166 (9%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSR 185
           D         + +R  ++  +R      N +E  TP ++ ++           +F+ P  
Sbjct: 30  DWMPTASISQLKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGY 89

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +GS   L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +
Sbjct: 90  A-KGSALHLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFTMLEWYRIGFD 147

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
              +++ M+ +L+ V            +  R+ Y +A        P
Sbjct: 148 HHALMDEMDALLQLVLR--------CGSAERMTYQEAFLNVLGVCP 185



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G          L  F      +  +
Sbjct: 239 FPASQAALAKINPADPR--VADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEM 296

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 297 GLTEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 345


>gi|297581491|ref|ZP_06943414.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534329|gb|EFH73167.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 349

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 65/166 (39%), Gaps = 16/166 (9%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSR 185
           D         + +R  ++  +R      N +E  TP ++ ++           +F+ P  
Sbjct: 30  DWMPTASISQLKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGY 89

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +GS   L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +
Sbjct: 90  A-KGSALHLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFTMLEWYRIGFD 147

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
              +++ M+ +L+ V            +  R+ Y +A        P
Sbjct: 148 HHALMDEMDALLQLVLR--------CGSAERMTYQEAFLNVLGVCP 185



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G          L  F      +  +
Sbjct: 239 FPASQAALAKINPADPR--VAERFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEM 296

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 297 GLTEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 345


>gi|153825094|ref|ZP_01977761.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae MZO-2]
 gi|149741240|gb|EDM55282.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae MZO-2]
          Length = 349

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 65/166 (39%), Gaps = 16/166 (9%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSR 185
           D         + +R  ++  +R      N +E  TP ++ ++           +F+ P  
Sbjct: 30  DWMPTASISQLKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGY 89

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +GS   L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +
Sbjct: 90  A-KGSALHLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFTMLEWYRIGFD 147

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
              +++ M+ +L+ V            +  R+ Y +A        P
Sbjct: 148 HHALMDEMDALLQLVLR--------CGSAERMTYQEAFLNVLGVCP 185



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G          L  F      +  +
Sbjct: 239 FPASQAALAKINPADPR--VADRFEVYFKGIELANGFHELDNPAEQLVRFKADNAKRLEM 296

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 297 GLTEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 345


>gi|10440131|dbj|BAB15655.1| unnamed protein product [Homo sapiens]
          Length = 250

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 27/157 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           AD R     E  ++        +++++P                PF M            
Sbjct: 118 ADLRTE--HEKYLVKHCGNIPVFVINYPL------------TLKPFYMRDNED------G 157

Query: 474 LLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                A   DL+  G  E+  GG+R      + +  +  G+++      +       + G
Sbjct: 158 PQHTVA-AVDLLVPGVGELFGGGLREERYHFLEERLARSGLTEV-----YQWYLDLRRFG 211

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             PHGG   G +R +  +LG  N+++V  FP   + C
Sbjct: 212 SVPHGGFGIGFERYLQCILGVDNIKDVIPFPRFPHSC 248



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRG 259
           M+  F + F   P FR E+ +S R   EFY ++ E+SFV+   D++  +E + + 
Sbjct: 1   MSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVDSLQDLMQVIEELFKA 55


>gi|229507296|ref|ZP_04396801.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae BX 330286]
 gi|229509780|ref|ZP_04399261.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae B33]
 gi|229516905|ref|ZP_04406351.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae RC9]
 gi|229606802|ref|YP_002877450.1| lysyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|255744383|ref|ZP_05418335.1| lysyl-tRNA synthetase-related protein [Vibrio cholera CIRS 101]
 gi|262158507|ref|ZP_06029622.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae INDRE 91/1]
 gi|262170099|ref|ZP_06037788.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae RC27]
 gi|25009412|sp|Q9KNS6|SYK3_VIBCH RecName: Full=Uncharacterized protein YjeA
 gi|229345968|gb|EEO10940.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae RC9]
 gi|229353254|gb|EEO18193.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae B33]
 gi|229354801|gb|EEO19722.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae BX 330286]
 gi|229369457|gb|ACQ59880.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae MJ-1236]
 gi|255737908|gb|EET93301.1| lysyl-tRNA synthetase-related protein [Vibrio cholera CIRS 101]
 gi|262021507|gb|EEY40219.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae RC27]
 gi|262029668|gb|EEY48317.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae INDRE 91/1]
          Length = 324

 Score = 74.3 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 67/178 (37%), Gaps = 16/178 (8%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSR 185
           D         + +R  ++  +R      N +E  TP ++ ++           +F+ P  
Sbjct: 5   DWMPTASISQLKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGY 64

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +GS   L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +
Sbjct: 65  A-KGSALHLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFTMLEWYRIGFD 122

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
              +++ M+ +L+ V            +  R+ Y +A        P       +  V 
Sbjct: 123 HHALMDEMDALLQLVLR--------CGSAERMTYQEAFLNVLGVCPLEEEMRELKQVA 172



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 63/189 (33%), Gaps = 33/189 (17%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIM 438
           L     E  +V   +   D       +P +           I  E  I         ++ 
Sbjct: 161 LEEEMRELKQVAATLGLSDI-----AEPEEDRDTLLQLLFSIGIEPKI---GQITPAFVY 212

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           DFP                     Q  +  +   D     A ++++   G E+A+G    
Sbjct: 213 DFP-------------------ASQAALAKINPADPR--VADRFEVYFKGIELANGFHEL 251

Query: 499 HMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
                 L  F      +  +    +     L  A + G+P   G+A GIDR++ML LG  
Sbjct: 252 DNPAEQLARFKADNAKRLEMGLTEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGED 311

Query: 555 NVREVSLFP 563
           ++ +V+ FP
Sbjct: 312 HIDKVTAFP 320


>gi|183179669|ref|ZP_02957880.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae MZO-3]
 gi|183013080|gb|EDT88380.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae MZO-3]
          Length = 349

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 65/166 (39%), Gaps = 16/166 (9%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSR 185
           D         + +R  ++  +R      N +E  TP ++ ++           +F+ P  
Sbjct: 30  DWMPTASISQLKQRATLLRQIREFFADRNVLEVETPAMSHATVTDIHLHTFKTEFVGPGY 89

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +GS   L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +
Sbjct: 90  A-KGSALHLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFTMLEWYRIGFD 147

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
              +++ M+ +L+ V            +  R+ Y +A        P
Sbjct: 148 HHALMDEMDALLQLVLR--------CGSAERMTYQEAFLNVLGVCP 185



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G          L  F      +  +
Sbjct: 239 FPASQAALAKINPADPR--VADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEM 296

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 297 GLTEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 345


>gi|256823215|ref|YP_003147178.1| lysyl-tRNA synthetase-like protein GenX [Kangiella koreensis DSM
           16069]
 gi|256796754|gb|ACV27410.1| lysyl-tRNA synthetase-related protein GenX [Kangiella koreensis DSM
           16069]
          Length = 316

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 71/200 (35%), Gaps = 29/200 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
           +++      + L+          L++    +   +  +  +    +    + I  +LG+ 
Sbjct: 138 DLSYQQAFIEFLDFDPLSITDEALELFARSNLGSLPNELERDDFLSLLFEDKIEPQLGL- 196

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                  C+I D+P                     Q  +  +   D     A +++L   
Sbjct: 197 ---NGSVCFIYDYP-------------------ASQAALARISKLDPR--VAHRFELYIE 232

Query: 488 GFEIASGGIRNHMSEVMLQAFSN---VGISKEVVENRFG-GLYRAFQCGMPPHGGIAAGI 543
           G E+A+G      S   L  F        +  + E         A + G+P   G+A G+
Sbjct: 233 GIELANGFYELADSSQQLARFEADNSWRKNNGLAEIAIDQHFIAALEYGLPDCSGVALGL 292

Query: 544 DRIVMLLLGAKNVREVSLFP 563
           DR++M+ L  K +++V  FP
Sbjct: 293 DRLLMIKLDTKEIQDVIAFP 312



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 46/117 (39%), Gaps = 1/117 (0%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           R  ++ ++R        +E  TP L+           + + V+      L  +P+   + 
Sbjct: 16  RAVLMATVRHFFAERGVLEVDTPALSHHGVTDRYMRSMTAEVSSTESGFLQTSPEYAMKR 75

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           L+A G    +QI   FR ++  +   P EF  L+      +   +++ +  ++  V 
Sbjct: 76  LLADGSGSIYQICKAFRQDEVGAKHNP-EFTMLEWYRLGFDHFQLMDDVFELVSEVL 131


>gi|126465244|ref|YP_001040353.1| aspartate-ammonia ligase [Staphylothermus marinus F1]
 gi|126014067|gb|ABN69445.1| aspartate-ammonia ligase [Staphylothermus marinus F1]
          Length = 417

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 61/325 (18%), Positives = 115/325 (35%), Gaps = 56/325 (17%)

Query: 1   MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
           M +YR             S V +  W+           L +RD  GI     +      E
Sbjct: 1   MKQYR-----------DSSVVEIIAWIADKMGDK----LMLRDPSGI--ESFSIKGIGSE 43

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
             KS+  E +L I G+V+  +              +     +++    +  +  +   + 
Sbjct: 44  EIKSLPLETLLWIKGIVVDDT--------------IIVSDYKVIHKPVKERIVDYTRIDN 89

Query: 121 PESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPE--G 176
            E   +   +    R   +   I   + +    R  + ++ FIE   P+++ AS P   G
Sbjct: 90  VELSDYARHYAWYFRNSIISSTIKLLSYVTRYSRENLYSKGFIELLPPMISLASDPGLRG 149

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR---SDRLPGE 233
           A+          G  Y L  +   +KQ  +A  +++ F  A   R+E P    + R   E
Sbjct: 150 AKKLKTKYY---GETYELTSSVIMFKQASVA-VYEKVFFTARNIREEPPENIWTGRHLSE 205

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV--------------SNNFLRICY 279
           F QLD+E +  + +D++   E +L  V +  ++ +                   F RI Y
Sbjct: 206 FTQLDIEWAMSDLEDVIRLAEELLYTVSKIIADKHIDLIYDIGERKEPIILKPPFPRIRY 265

Query: 280 DDAIRRYGTDKPDLRNPIIMHNVTE 304
           D+A+         +     + +  E
Sbjct: 266 DEALELARKLGEPVEWGKELTHKAE 290



 Score = 48.9 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 64/214 (29%), Gaps = 31/214 (14%)

Query: 353 QPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSF 412
              L Y   ++    ++  +  + +    +  +    R+   +        G+P+++   
Sbjct: 225 AEELLYTVSKIIADKHIDLIYDIGERKEPIILKPPFPRIRYDEALELARKLGEPVEWGKE 284

Query: 413 AA-DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
               A   IA+             WI+ +P                 F       +    
Sbjct: 285 LTHKAETKIAEYYD-------SPVWIIGYP------------VISRGFYYLPDPDDPRYN 325

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D   +    Y     G  I  G       +++ +             +++       + 
Sbjct: 326 LDFNLLLPEGY-----GEVIDGGTREYRYPQIIERIKKL-----GEPLDKYEWFIELVKE 375

Query: 532 G-MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           G +PP  G   G++R+   L G K+V   ++FP 
Sbjct: 376 GGIPPSSGWGLGLERLTRYLAGHKHVGYATIFPK 409


>gi|323441222|gb|EGA98900.1| lysyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 51

 Score = 74.3 bits (181), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 20/50 (40%), Positives = 28/50 (56%)

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                     A + GMPP GG+  GIDR+VMLL  + ++R+V LFP  + 
Sbjct: 1   AHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQ 50


>gi|261211221|ref|ZP_05925510.1| lysyl-tRNA synthetase-related protein [Vibrio sp. RC341]
 gi|260839722|gb|EEX66333.1| lysyl-tRNA synthetase-related protein [Vibrio sp. RC341]
          Length = 349

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 63/166 (37%), Gaps = 16/166 (9%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSR 185
           D         + +R  ++  +R      + +E  TP ++ ++           +F+ P  
Sbjct: 30  DWMPTASINQLKQRATLLRQIREFFAERDVLEVETPAMSHATVTDIHLHTFQTEFVGPGY 89

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             QG    L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +
Sbjct: 90  A-QGRSLHLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFTMLEWYRIGFD 147

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
              +++ M+ +L+ V               R+ Y +A        P
Sbjct: 148 HHALMDEMDALLQLVLR--------CGCAERMTYQEAFLNVLGVCP 185



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G          L  F      +  +
Sbjct: 239 FPASQAALAKINPADPR--VADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEM 296

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML L   ++ +V+ FP
Sbjct: 297 GLAEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALDEDHIDKVTAFP 345


>gi|209696193|ref|YP_002264123.1| lysyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|208010146|emb|CAQ80471.1| putative lysyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 328

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 62/157 (39%), Gaps = 16/157 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYAL 194
            + +R  I+  +R        +E  TP ++ ++           DF+ P   +    Y +
Sbjct: 18  QLQQRADILALIRRFFFERKVMEVDTPAMSHATVTDVHLHTFQTDFVGPGYADGVHLYFM 77

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+++G    +QI   FR+E+      P EF  L+      +   +++ M 
Sbjct: 78  -TSPEFHMKRLLSAGSGAIYQINKAFRNEEAGRFHNP-EFTMLEWYRPTFDHHQLMDEMN 135

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            +L+ V +         ++  R+ Y  A        P
Sbjct: 136 ELLKLVLK--------CDDAERMTYQQAFINVLGVCP 164



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 75/235 (31%), Gaps = 37/235 (15%)

Query: 336 GNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQD 395
            +    D MNE  +         +  + D++  +         L +   EA    L    
Sbjct: 126 DHHQLMDEMNELLK---------LVLKCDDAERMTYQQAFINVLGVCPLEASMDELRAVA 176

Query: 396 GDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFA 455
                    D  +           +  E  I          + DFP              
Sbjct: 177 APLGLSDIADVEEDRDTLLQLLFSMGVEEKI---GQTVPVCVYDFP-------------- 219

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
                  Q  +  +   D     A ++++   G E+A+G      ++  L  F      +
Sbjct: 220 -----ASQAALAKINPEDPR--VAERFEVYFKGIELANGFHELDNAKEQLARFEEDNAKR 272

Query: 516 EVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + +    +     L  A + G P   G+A GIDR++ML +G K++ +V  FP  +
Sbjct: 273 KSMGLIEQPIDYHLIAALEAGFPDCAGVALGIDRLIMLAMGEKHIDQVMAFPFDR 327


>gi|20987993|gb|AAH30041.1| Nars2 protein [Mus musculus]
          Length = 250

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 25/137 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             +++++P                PF M +            +  A   DL+  G  E+ 
Sbjct: 136 PVFVINYP------------SELKPFYMRENED------GPQNTVA-AVDLLVPGVGELF 176

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G +R     V+ Q  +  G++K      +       + G  PHGG   G +R +  +LG
Sbjct: 177 GGSLREERYHVLEQRLARSGLTKA-----YQWYLDLRKFGSVPHGGFGMGFERYLQCILG 231

Query: 553 AKNVREVSLFPMSQNFC 569
             N+++V  FP   + C
Sbjct: 232 VDNIKDVIPFPRFTHSC 248



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 3/100 (3%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRGVFEEF 264
           M+  F + F   P FR E+ +S R   EFY ++ E+SFVE   D++  ME + +   E  
Sbjct: 1   MSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEISFVESLQDLMQVMEELFKATTEMV 60

Query: 265 SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
            +               A  + G  +  L+N  ++ + TE
Sbjct: 61  LSHCPEDVELC--HQFIAAGQKGRLEHMLKNNFLIISYTE 98


>gi|315125469|ref|YP_004067472.1| fold recognizing lysyl-tRNA [Pseudoalteromonas sp. SM9913]
 gi|315013982|gb|ADT67320.1| fold recognizing lysyl-tRNA [Pseudoalteromonas sp. SM9913]
          Length = 324

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 7/137 (5%)

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSP-----EGARDFLVPSR 185
           DL + +    I+K R  I+ S+R      N +E  TP L+A+S             V   
Sbjct: 4   DLWKPSASIEILKQRAAIMRSIREFFYERNVMEVETPSLSAASVTDVHLASFNTTFVGPG 63

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G    L  +P+   + L+A+G    FQ+   FR+E+  S   P EF  L+      +
Sbjct: 64  HAGGLPLFLQTSPEFAMKRLLAAGSGAIFQLCKAFRNEEAGSHHNP-EFTMLEWYRPGFD 122

Query: 246 QDDILNTMENVLRGVFE 262
           +  +++ ++ +++ + E
Sbjct: 123 EFALMDEIDELMQLILE 139



 Score = 64.3 bits (155), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 13/126 (10%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E    + K  F ++ F   Q  +  +  +D     A +++L     E+A+G      ++ 
Sbjct: 200 EPTIGQDKPCFVYH-FPASQAALAQICEHDER--VAGRFELYYKNMELANGFNELTNAKE 256

Query: 504 MLQAFSNVG-------ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
             + F+          + +  ++ R   L  A + G+    G+A GIDR+VML    + +
Sbjct: 257 QAKRFNEDNTYRAANGLKQVPMDTR---LIAALEHGLEQCAGVALGIDRLVMLATNKQKI 313

Query: 557 REVSLF 562
           +EV  F
Sbjct: 314 KEVIAF 319


>gi|307824008|ref|ZP_07654235.1| tRNA synthetase class II (D K and N) [Methylobacter tundripaludum
           SV96]
 gi|307734792|gb|EFO05642.1| tRNA synthetase class II (D K and N) [Methylobacter tundripaludum
           SV96]
          Length = 306

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 4/92 (4%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN----VGISKEVVENRFGGLYRAFQC 531
           S+   + +L  NG E+ +G      ++   + F+         K  V  +   L  A + 
Sbjct: 211 SLITDRVELFINGIELGNGYYELVDADEQSKRFNKELVIRQQQKLAVSVKDKRLVSALES 270

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+P   G+A G+DR++MLL G++++ +V  FP
Sbjct: 271 GLPECSGVAIGLDRLLMLLSGSESIEDVLSFP 302



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 8/119 (6%)

Query: 148 IINSMRCRMIAENFIECSTPILTASSPEGARD---FLVPSRVN--QGSFYALPQAPQQYK 202
           +++ +R      + +E  TP+L+ S   G      F               L  +P+   
Sbjct: 1   MLSEIRQFFAERSVLEVETPLLSHSI--GTDPQLAFFTTEYCLSPLRQTLFLQTSPEFAM 58

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           + L+A+G    +QI   FR+ +      P EF  L+          +++ +  ++ G+F
Sbjct: 59  KRLLAAGSGSIYQIGKAFRNGESGRFHNP-EFTMLEWYRVGFTLPQLMDEIAELIAGLF 116


>gi|18978323|ref|NP_579680.1| asparagine synthetase A [Pyrococcus furiosus DSM 3638]
 gi|42543102|pdb|1NNH|A Chain A, Hypothetical Protein From Pyrococcus Furiosus Pfu-1801964
 gi|18894151|gb|AAL82075.1| partial asparaginyl-tRNA synthetase matches COOH terminus
           [Pyrococcus furiosus DSM 3638]
          Length = 294

 Score = 73.9 bits (180), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 84/198 (42%), Gaps = 14/198 (7%)

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS----PEGARDFLVPSRVN- 187
           +    +   +  +T+I+  M    + E F      I++  +    P+ A + + P+ V  
Sbjct: 6   IISREISPTLDIQTKILEYMTDFFVKEGFKWLLPVIISPITDPLWPDPAGEGMEPAEVEI 65

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDMEMSFVE 245
            G    L  +   +KQL +A G  + F ++P  R E  + D  R   EF QLD E+   +
Sbjct: 66  YGVKMRLTHSMILHKQLAIAMGLKKIFVLSPNIRLESRQKDDGRHAYEFTQLDFEVERAK 125

Query: 246 QDDILNTMENVLRGVFEEFSNGN----TVSNNFLRICYDDAIRRYGTDK---PDLRNPII 298
            +DI+  +E ++ G+F +           +  F    Y + +  +G+D+    ++  P  
Sbjct: 126 MEDIMRLIERLVYGLFRKAEEWTGREFPKTKRFEVFEYSEVLEEFGSDEKASQEMEEPFW 185

Query: 299 MHNVTEHFVHSEFRVFSK 316
           + N+   F   E   F +
Sbjct: 186 IINIPREFYDREVDGFWR 203



 Score = 46.2 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 16/135 (11%)

Query: 440 FPFYEWNE-------EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV--CNGFE 490
           F  +E++E       +EK       PF +     E       +      YDL+      E
Sbjct: 158 FEVFEYSEVLEEFGSDEKASQEMEEPFWIINIPREFYDRE--VDGFWRNYDLILPYGYGE 215

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG-MPPHGGIAAGIDRIVML 549
           +ASGG R    E ++      G++    E+ F       + G + P  G   G++R+V  
Sbjct: 216 VASGGEREWEYEKIVAKIRKAGLN----EDSFRPYLEIAKAGKLKPSAGAGIGVERLVRF 271

Query: 550 LLGAKNVREVSLFPM 564
           ++GAK++ EV  FP 
Sbjct: 272 IVGAKHIAEVQPFPR 286


>gi|153878039|ref|ZP_02004462.1| Lysyl-tRNA synthetase [Beggiatoa sp. PS]
 gi|152065497|gb|EDN65538.1| Lysyl-tRNA synthetase [Beggiatoa sp. PS]
          Length = 185

 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 12/116 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV------- 511
           F   Q  +   + ++     A ++++   G E+A+G           Q F          
Sbjct: 75  FPASQAALARKRKDNPQ--LAERFEVYLQGIELANGFYELTDPIEQRQRFEQDLAKRKTL 132

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            +    ++ RF     A   G+P   G+A G+DR++ML++GA ++REV  FP+ ++
Sbjct: 133 NLPTYPLDERF---LAALTAGLPDCAGVALGLDRLLMLIIGASHIREVLAFPIDKS 185


>gi|297581493|ref|ZP_06943416.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534331|gb|EFH73169.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 324

 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 65/166 (39%), Gaps = 16/166 (9%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSR 185
           D         + +R  ++  +R      N +E  TP ++ ++           +F+ P  
Sbjct: 5   DWMPTASISQLKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGY 64

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +GS   L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +
Sbjct: 65  A-KGSALHLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFTMLEWYRIGFD 122

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
              +++ M+ +L+ V            +  R+ Y +A        P
Sbjct: 123 HHALMDEMDALLQLVLR--------CGSAERMTYQEAFLNVLGVCP 160



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G          L  F      +  +
Sbjct: 214 FPASQAALAKINPADPR--VAERFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEM 271

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 272 GLTEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|229513575|ref|ZP_04403039.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae TMA 21]
 gi|229349452|gb|EEO14408.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae TMA 21]
 gi|327485129|gb|AEA79536.1| Lysyl-tRNA synthetase-like protein [Vibrio cholerae LMA3894-4]
          Length = 324

 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 65/166 (39%), Gaps = 16/166 (9%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSR 185
           D         + +R  ++  +R      N +E  TP ++ ++           +F+ P  
Sbjct: 5   DWMPTASISQLKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGY 64

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +GS   L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +
Sbjct: 65  A-KGSALHLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFTMLEWYRIGFD 122

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
              +++ M+ +L+ V            +  R+ Y +A        P
Sbjct: 123 HHALMDEMDALLQLVLR--------CGSAERMTYQEAFLNVLGVCP 160



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G          L  F      +  +
Sbjct: 214 FPASQAALAKINPADPR--VADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEM 271

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 272 GLTEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|90407180|ref|ZP_01215368.1| lysyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90311756|gb|EAS39853.1| lysyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 370

 Score = 73.9 bits (180), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 29/154 (18%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSP-------------------EGARDFLVPS 184
           KR RII  +R   I  + +E  TP L+ S                     E A     P 
Sbjct: 58  KRARIIQGIRQFFIDRDLLEVETPSLSQSGVTDQHLACFKTYFIGPEISIEKAEPLGTPL 117

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                    L  +P+ + + L+++G    FQI+  FR+E+      P EF  L+      
Sbjct: 118 Y--------LQTSPEFHMKRLLSAGSGSIFQISKAFRNEESGRYHNP-EFTLLEWYRIDF 168

Query: 245 EQDDILNTMENVLRGVFE-EFSNGNTVSNNFLRI 277
           +   ++  M+ +L+ V   E +   T  + F++I
Sbjct: 169 DHFQLMQEMDQLLQQVLSCEPAKKMTYQHAFMQI 202



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 32/137 (23%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           + C+I DFP                     Q  +  +  + +    A ++++   G E+A
Sbjct: 254 KPCFIYDFP-------------------ASQAALARI--SPVDKRVAERFEVYYKGIELA 292

Query: 493 SGGIRNHMSEVMLQAFSNVG-------ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
           +G    + S   L+ F +         + +  ++ RF           P   G+A GIDR
Sbjct: 293 NGFHELNDSAEQLRRFEHDNCLRRANALPEMPIDFRFVASLNKL----PNCAGVALGIDR 348

Query: 546 IVMLLLGAKNVREVSLF 562
           ++ML    K++ +V  F
Sbjct: 349 LIMLATAQKHIDKVLSF 365


>gi|254428257|ref|ZP_05041964.1| tRNA synthetases class II (D, K and N) subfamily [Alcanivorax sp.
           DG881]
 gi|196194426|gb|EDX89385.1| tRNA synthetases class II (D, K and N) subfamily [Alcanivorax sp.
           DG881]
          Length = 311

 Score = 73.6 bits (179), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 10/112 (8%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS-------NV 511
           F      +   + ++  +  A ++++   G E+A+G       +   + F          
Sbjct: 199 FPGWAAALAQTRKDEDGTTVARRFEIYYRGLELANGYQELTDPKEQRRRFEQDNTLRNAH 258

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+S    +     L  A   G+P   G+A G++R++M   G   + +V  FP
Sbjct: 259 GLSPMAADP---FLLDAMDAGLPACSGVAVGMERLLMAQQGTGRIDDVIAFP 307



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 5/117 (4%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           R  ++ ++R      N +E  TP L      G  D  +      G +  L  +P+ + + 
Sbjct: 16  RAELLRTVRAFFDDRNVLEVDTPQLARY---GVSDLHIQCIPVPG-YGYLQSSPEYHMKR 71

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           L+A+G    +Q+   FRD +      P EF  L+        DD++     +   +F
Sbjct: 72  LLAAGSGPIYQVCKAFRDGEAGGRHNP-EFTMLEWYRPGFALDDLIQECLALFAALF 127


>gi|312882763|ref|ZP_07742497.1| lysyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369547|gb|EFP97065.1| lysyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 323

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 69/173 (39%), Gaps = 19/173 (10%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQG- 189
           D R       I +R +++  +R      N +E  TP ++ S+      D      +  G 
Sbjct: 4   DWRPSADISKIRQRAQVLQKIRQFFCQRNVLEVDTPAMSHSTVTDIHLDTFETHFIGPGY 63

Query: 190 -----SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
                 F+A   +P+ + + L+A+G    +Q++  FR+E+      P EF  L+      
Sbjct: 64  ASGRKLFFA--TSPEFHMKRLLAAGSGCIYQLSKAFRNEESGRFHNP-EFTLLEWYRVGF 120

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +   +++ M ++L+ + +             R+ Y  A        P L +P+
Sbjct: 121 DHHKLMDEMADLLQLILQ--------CKTPSRMTYQTAFIDTLGVCP-LSDPM 164



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK--- 515
           F   Q  +  +   D     A ++++   G E+A+G          LQ F    + +   
Sbjct: 213 FPASQAALAKISQVD--KRVAERFEVYFKGIELANGFHELEDPREQLQRFERDNLKRVAR 270

Query: 516 -EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            E  +     L  A + G+P   G+A G+DR+VML   + ++ ++  FP
Sbjct: 271 GEESQPIDRHLIAALESGLPSCSGVALGVDRLVMLATASDHIDQILAFP 319


>gi|226329418|ref|ZP_03804936.1| hypothetical protein PROPEN_03323 [Proteus penneri ATCC 35198]
 gi|225202604|gb|EEG84958.1| hypothetical protein PROPEN_03323 [Proteus penneri ATCC 35198]
          Length = 325

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR--DF---LVPSRVNQGSFYAL 194
            N++K+ +II+++R        +E  TP+++ ++        F    V    +QG    L
Sbjct: 14  ANLLKKAKIISNIRRFFTDRGVLEVETPMMSQATVTDVHLYPFETQFVGPGASQGLKLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+     +Q+  CFR+E+      P EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAANSGPIYQMGRCFRNEEAGRYHNP-EFTMLEWYRPCFDMYRLMNEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ V + E S   +    FLR      I     DK  LR      +++      E +
Sbjct: 133 DLLQEVLDCEASESLSYQQAFLR---YLDIDPLSVDKEKLREVAAKLDLSNIADTEEDK 188



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 12/112 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------V 511
           F   Q  +  +   D     A ++++   G E+A+G      ++     F         +
Sbjct: 215 FPASQASLAEISSEDHR--VAERFEVYFKGVELANGFRELTDAQEQRHRFERDNRQRVAM 272

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+ ++ ++ RF     A + G+P   G+A G+DR++ML LG +++ +V  FP
Sbjct: 273 GLPEQPIDERF---LAALEAGLPECSGVALGVDRLIMLALGVEHLSDVIAFP 321


>gi|258620473|ref|ZP_05715511.1| Lysyl-tRNA synthetase-related protein [Vibrio mimicus VM573]
 gi|258587352|gb|EEW12063.1| Lysyl-tRNA synthetase-related protein [Vibrio mimicus VM573]
          Length = 324

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 16/166 (9%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSR 185
           D         + +R  ++  +R      + +E  TP ++ ++           +F+ P  
Sbjct: 5   DWMPTAPISQLKQRATLLRQIREFFAERDVLEVETPAMSHATVTDIHLHTFKTEFVGPGY 64

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +GS   L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +
Sbjct: 65  A-KGSSLHLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFTMLEWYRIGFD 122

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
              +++ M+ +L+ V            +  R+ Y +A        P
Sbjct: 123 HHALMDEMDALLQLVLR--------CGSAERMTYQEAFLNVLGVCP 160



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G          L  F      +  +
Sbjct: 214 FPASQAALAKINPADPR--VADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEM 271

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 272 GLVEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|315426949|dbj|BAJ48568.1| asparaginyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
 gi|315426968|dbj|BAJ48586.1| asparaginyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 347

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 69/181 (38%), Gaps = 16/181 (8%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R   +   +  +     ++R  + +  F+E   PI+   +  G R     +    G  Y 
Sbjct: 38  RTPRMRLILRVQAEANRAVRSWLDSHGFLELLPPIIGPVTDPGIRGAKQVTIDYYGREYK 97

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR---SDRLPGEFYQLDMEMSFVEQDDIL 250
           +  +   YKQ+L A+ FD+ +  +P  R E      + R   EF Q+D+E + V+    +
Sbjct: 98  VMSSAILYKQML-ATAFDKIYFFSPNIRLEPLESATTGRHLVEFVQIDIEEADVDYRAAM 156

Query: 251 NTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
           +T EN+L  V    +                    F +I + +AI         ++    
Sbjct: 157 STAENLLAYVVNTVAETARQELEQLGRKLPRFKTPFRKITHAEAIEILRAHGEQVQPNAE 216

Query: 299 M 299
           +
Sbjct: 217 I 217



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 44/127 (34%), Gaps = 12/127 (9%)

Query: 445 WNEEEKKIDFAHNPFT---MPQGGMESLKGNDLLSIKAFQ-YDLVCN---GFEIASGGIR 497
           W +EEK     + PF     P+G        D       + +DL+     G   +     
Sbjct: 219 WPQEEKLSKIINEPFFITDYPKGARGFYDKEDPQRPGILKDFDLMYPEGYGEAASGAERE 278

Query: 498 NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
              S+V+ +              ++G      + G+ P  G   G++R+   L G + V 
Sbjct: 279 YEYSKVLER-----LKQSGENPAKYGWYLDMLREGIRPTSGFGIGVERLTRYLCGLQAVW 333

Query: 558 EVSLFPM 564
           E   +P 
Sbjct: 334 EARPYPK 340


>gi|229527420|ref|ZP_04416812.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 12129(1)]
 gi|229335052|gb|EEO00537.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 12129(1)]
          Length = 324

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 65/166 (39%), Gaps = 16/166 (9%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSR 185
           D         + +R  ++  +R      N +E  TP ++ ++           +F+ P  
Sbjct: 5   DWMPTASISQLKQRATLLRQIREFFAERNVLEVETPAISHATVTDIHLHTFKTEFVGPGY 64

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +GS   L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +
Sbjct: 65  A-KGSALHLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFTMLEWYRIGFD 122

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
              +++ M+ +L+ V            +  R+ Y +A        P
Sbjct: 123 HHALMDEMDALLQLVLR--------CGSAERMTYQEAFLNVLGVCP 160



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G          L  F      +  +
Sbjct: 214 FPASQAALAKINPADPR--VADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEM 271

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 272 GLTEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|262166668|ref|ZP_06034405.1| lysyl-tRNA synthetase-related protein [Vibrio mimicus VM223]
 gi|262026384|gb|EEY45052.1| lysyl-tRNA synthetase-related protein [Vibrio mimicus VM223]
          Length = 324

 Score = 73.6 bits (179), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 16/166 (9%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSR 185
           D         + +R  ++  +R      + +E  TP ++ ++           +F+ P  
Sbjct: 5   DWMPTASISQLKQRATLLRQIREFFAERDVLEVETPAMSHATVTDIHLHTFKTEFVGPGY 64

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +GS   L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +
Sbjct: 65  A-KGSSLHLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFTMLEWYRIGFD 122

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
              +++ M+ +L+ V            +  R+ Y +A        P
Sbjct: 123 HHTLMDEMDALLQLVLR--------CGSAERMTYQEAFLNVLGVCP 160



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G          L  F      +  +
Sbjct: 214 FPASQAALAKINPADPR--VADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEM 271

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 272 GLLEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|296242010|ref|YP_003649497.1| tRNA synthetase class [Thermosphaera aggregans DSM 11486]
 gi|296094594|gb|ADG90545.1| tRNA synthetase class II (D K and N) [Thermosphaera aggregans DSM
           11486]
          Length = 450

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 13/190 (6%)

Query: 96  LSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155
           L   K E++  ++          E      F Y  + + R    K I   + +   +R  
Sbjct: 102 LEVNKYEVIYPSKLECCETDA--EDVREYAFNY-HMYVGRPRCFKVIRTISILSYLIRNA 158

Query: 156 MIAENFIECSTPIL-TASSPE--GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
           +I E F E   PIL   S P   GA    V      GS Y L  +   YKQ + AS F++
Sbjct: 159 LIFEGFTELQPPILGWKSDPGLRGASKVKVSLY---GSEYELHSSLIMYKQ-IYASIFEK 214

Query: 213 YFQIAPCFR---DEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
            F  A   R    E+  + R   EF Q+D+E +F    + ++  E++L+ V +EF N + 
Sbjct: 215 IFYFARNIRVEPAENFYTGRHLVEFTQVDVEEAFTSMQESISLAESILKKVVKEFLNNHA 274

Query: 270 VSNNFLRICY 279
              +  RI +
Sbjct: 275 DLLDSSRIEW 284


>gi|326794184|ref|YP_004312004.1| hypothetical protein Marme_0893 [Marinomonas mediterranea MMB-1]
 gi|326544948|gb|ADZ90168.1| Uncharacterized protein YjeA [Marinomonas mediterranea MMB-1]
          Length = 333

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 4/132 (3%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSF--YALPQ 196
             +  R  ++ ++R     EN +E  TP L+  S  +   + L  +    G    Y L  
Sbjct: 14  NTLQARATLLKAIREYFSLENVLEVDTPCLSLGSISDPHIEVLTTTTKTAGQKVTYFLQT 73

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+   + L+ +G    +Q+   FR ED    R   EF  L+      +   +++ M  +
Sbjct: 74  SPEFAMKRLLCAGMPSIYQLGKVFRAEDLG-RRHSIEFTMLEWYRLGYDHWKLMDDMAQL 132

Query: 257 LRGVFEEFSNGN 268
           L+ V  + SN  
Sbjct: 133 LQFVVGQMSNHT 144



 Score = 63.9 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 63/194 (32%), Gaps = 32/194 (16%)

Query: 375 VAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEF 434
             KHLNI         L  Q      F   +         +     A E  I        
Sbjct: 161 FLKHLNIDPFTVSIEVLQAQSHRLTEFGLEETD--RDTLLELLFSTAIEPNI---GQVSP 215

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
           C++ D+P                     Q  +     +D  +  + +++L   G E+A+G
Sbjct: 216 CFVYDYP-------------------ESQAALAKKYRDDHGNAVSARFELYWQGMELANG 256

Query: 495 GIRNHMSEVMLQA------FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
                 +                    + + ++   L  A   GMP   G+A G+DR++M
Sbjct: 257 YYELTDAVEQEARIDQDMSMRLQNKQPDRIADK--RLVSALHEGMPTCAGVALGVDRLLM 314

Query: 549 LLLGAKNVREVSLF 562
           LL+   ++ +V  F
Sbjct: 315 LLVDKAHIDQVMPF 328


>gi|109896771|ref|YP_660026.1| lysyl-tRNA synthetase-related protein GenX [Pseudoalteromonas
           atlantica T6c]
 gi|109699052|gb|ABG38972.1| lysyl-tRNA synthetase-related protein GenX [Pseudoalteromonas
           atlantica T6c]
          Length = 327

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 61/157 (38%), Gaps = 24/157 (15%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF-------- 191
             + +R  II ++R      +  E  TP L+ ++        V  RV    F        
Sbjct: 16  ATLKQRAAIITNIRQFFAQRDVWEVETPSLSNATVSD-----VHMRVFDTQFVDPMSPQQ 70

Query: 192 --YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  +P+   + L+ +G    FQIA  FR+E+      P EF  L+      + + +
Sbjct: 71  RTLYLQTSPEYAMKRLLCAGSGAIFQIAKAFRNEEAGKHHNP-EFTMLEWYRPGFDHNQL 129

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
           ++ ++ +++ V               R+ Y DA  +Y
Sbjct: 130 MDELDELMQSVV--------GCLPAKRMSYQDAFIQY 158



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 47/134 (35%), Gaps = 25/134 (18%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
             C+I DFP                     Q  +  +   D     A +++L   G E+A
Sbjct: 210 SPCFIFDFP-------------------ASQAALARVSVQDER--VAERFELYYKGLELA 248

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G      +    Q F      ++               A   G+P   G+A G+DR+VM
Sbjct: 249 NGFHELANAPEQRQRFERDNQQRKSAGLSTVPIDELFLDALDAGLPDCSGVAVGVDRLVM 308

Query: 549 LLLGAKNVREVSLF 562
           L L   +++ V  F
Sbjct: 309 LALEKSDIQHVLAF 322


>gi|330444991|ref|ZP_08308645.1| regulator of pyruvate oxidase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328493109|dbj|GAA03142.1| regulator of pyruvate oxidase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 322

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 6/112 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G       +  LQ F      +  +
Sbjct: 212 FPASQAALAQINPTDSR--VAERFEVYFKGIELANGFHELANGDEQLQRFEQDNQKRIEM 269

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
               +     L  A + G P   G+A GIDR++ML +G  ++ +V+ FP+ +
Sbjct: 270 GLQPQPIDMNLVNALRAGFPDCAGVALGIDRLIMLAMGLDHIEKVTAFPIDR 321



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 57/128 (44%), Gaps = 8/128 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYA 193
             + +R  ++  +R        +E  TP ++ ++           +F+ P   +  + Y 
Sbjct: 11  AQLKQRAYLLAVIRQFFAEREVMEVDTPAMSQATVTDIHLHTFQTEFVGPGYADGQTLY- 69

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+++G    +QI   FR+E+      P EF  L+      +   +++ M
Sbjct: 70  LMTSPEFHMKRLLSAGSGAIYQICKSFRNEESGRYHNP-EFTMLEWYRPNFDHHLLMDEM 128

Query: 254 ENVLRGVF 261
           +++L+ V 
Sbjct: 129 DDLLQLVL 136


>gi|119595467|gb|EAW75061.1| asparaginyl-tRNA synthetase 2 (mitochondrial)(putative), isoform
           CRA_a [Homo sapiens]
          Length = 250

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 27/157 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           AD R     E  ++        +++++P                PF M            
Sbjct: 118 ADLRTE--HEKYLVKHCGNIPVFVINYPL------------TLKPFYMRDNED------G 157

Query: 474 LLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                A   DL+  G  E+  GG+R      + +  +  G+++      +       + G
Sbjct: 158 PQHTVA-AVDLLVPGVGELFGGGLREERYHFLEERLARSGLTEV-----YQWYLDLRRFG 211

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             PHGG   G +R +  +LG  N+++V  FP   + C
Sbjct: 212 SVPHGGFGMGFERYLQCILGVDNIKDVIPFPRFPHSC 248



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRG 259
           M+  F + F   P FR E+ +S R   EFY ++ E+SFV+   D++  +E + + 
Sbjct: 1   MSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVDSLQDLMQVIEELFKA 55


>gi|28975406|gb|AAO61799.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus]
          Length = 76

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 4/72 (5%)

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           + +E     F     +KE  ++           A + G+PP  G   GIDR+VMLL    
Sbjct: 2   NDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTH 61

Query: 555 NVREVSLFPMSQ 566
            +R+V LFP  +
Sbjct: 62  TIRDVILFPAMR 73


>gi|229521718|ref|ZP_04411136.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae TM 11079-80]
 gi|229341312|gb|EEO06316.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae TM 11079-80]
          Length = 324

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 73/234 (31%), Gaps = 37/234 (15%)

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
           G  + A  D M+          L  +  R   +G +         L +   E     L  
Sbjct: 120 GFDHHALMDEMD---------ALLQLVLRCGSAGRMTYQEAFLNVLGVCPLEGEMRELKQ 170

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
                      +P +           I  E  I         ++ DFP            
Sbjct: 171 VAATLGLSDIAEPEEDRDTLLQLLFSIGIEPKI---GQITPAFVYDFP------------ 215

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
                    Q  +  +   D     A ++++   G E+A+G          L  F     
Sbjct: 216 -------ASQAALAKINPVDPR--VADRFEVYFKGIELANGFHELDNPAEQLARFKADNA 266

Query: 514 SKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            +  +    +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 267 KRLEMGLTEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 58/137 (42%), Gaps = 8/137 (5%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSR 185
           D         + +R  ++  +R      N +E  TP ++ ++           +F+ P  
Sbjct: 5   DWMPTASISQLKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGY 64

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +GS   L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +
Sbjct: 65  A-KGSALHLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFTMLEWYRIGFD 122

Query: 246 QDDILNTMENVLRGVFE 262
              +++ M+ +L+ V  
Sbjct: 123 HHALMDEMDALLQLVLR 139


>gi|315122589|ref|YP_004063078.1| putative lysyl-tRNA synthetase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495991|gb|ADR52590.1| putative lysyl-tRNA synthetase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 352

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 78/227 (34%), Gaps = 14/227 (6%)

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP------EGAR 178
            +   F   RR      ++KR  I  S+R      NF+E  +  L  S          + 
Sbjct: 11  WWNRDFHHHRRP----FLIKRNMIQTSLREYFFNNNFVEIDSMSLQVSPGNETHIQAFST 66

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
           + +      +  +  L  +P+   + L+A+G ++ F  A  +R+ +  S   P EF  L+
Sbjct: 67  ELITKDHTRKIMY--LQTSPEFSCKKLLAAGEEKIFCFAHVWRNGEQDSLHQP-EFTMLE 123

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              +    + ++     ++R   E+               + +A     +D       I 
Sbjct: 124 WYRAHESYEQLMQDCMEIIRCAAEKAKKSVFSFQGITCNPFSEAEYITVSDAFLRYAHID 183

Query: 299 MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMN 345
           + +  +H       + + + +   G  V          +R   +++ 
Sbjct: 184 LCSTLDHSSPPNRNLLA-LQAQKSGIRVANDDTWSDIFSRILVEKIE 229



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 7/109 (6%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           + +P+  +  +  +D       +++L     E+ +              F      K+ +
Sbjct: 243 YPLPESALAKVCSDDPR--FTQRFELYACNIELCNAFDELIDPIEQRHRFEKEMNEKKKI 300

Query: 519 ENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            N             +  MP   GIA G DR+VML  GA N+ E+   P
Sbjct: 301 YNETYPIDEDFLACLKE-MPSSSGIAMGFDRLVMLATGATNLNEIIWTP 348


>gi|189067875|dbj|BAG37813.1| unnamed protein product [Homo sapiens]
          Length = 250

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 27/157 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           AD R     E  ++        +++++P                PF M            
Sbjct: 118 ADLRTE--HEKYLVKHCGNIPVFVINYPL------------TLKPFYMRDNED------G 157

Query: 474 LLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                A   DL+  G  E+  GG+R      + +  +  G+++      +       + G
Sbjct: 158 PQHTVA-AVDLLVPGVGELFGGGLREERYHFLEERLARSGLTEV-----YQWYLDLRRFG 211

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             PHGG   G +R +  +LG  N+++V  FP   + C
Sbjct: 212 SVPHGGFGMGFERYLQCILGVDNIKDVIPFPRFPHSC 248



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRG 259
           M+  F + F   P FR E+ +S R   EFY ++ E+SFV+   D++  +E + R 
Sbjct: 1   MSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVDSLQDLMQVIEELFRA 55


>gi|264658074|emb|CBH31241.1| putative aspartyl-tRNA synthetase [Wolbachia endosymbiont of
           Simulium squamosum]
          Length = 93

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 5/93 (5%)

Query: 334 GGGNRAFCDRMNEWA-RSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLD 392
               R+F D+  E A +  G  GL YI +  DE+G+    GP+AK L+      IR   +
Sbjct: 5   AKEPRSFFDKKIEHAQKEFGAKGLGYITF--DENGD--AKGPIAKFLDDNRLNQIREITN 60

Query: 393 MQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
           ++ GDS FF +    +  + A      +  ELG
Sbjct: 61  IKPGDSVFFASDKENEAATIAGKVHTLLGSELG 93


>gi|330468940|ref|YP_004406683.1| asparagine synthetase A [Verrucosispora maris AB-18-032]
 gi|328811911|gb|AEB46083.1| asparagine synthetase A [Verrucosispora maris AB-18-032]
          Length = 338

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 4/138 (2%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            L  +     +  +   + + R  +  + F E   P++   +  GAR          G  
Sbjct: 23  HLIAEKTRAAMAVQQEALYAAREFLRGQGFTELLPPLIGPVTDPGARGAKALDVDFYGHT 82

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP---RSDRLPGEFYQLDMEMSFVEQDD 248
           Y +  +   YKQ  +  GF + F IAP  R E P    + R   EF+Q+D+E++   ++D
Sbjct: 83  YKIMTSAILYKQASL-RGFPKLFYIAPNIRVEPPETVDTGRHLVEFHQIDVEIAGGTRED 141

Query: 249 ILNTMENVLRGVFEEFSN 266
            ++T   +L  V     +
Sbjct: 142 AMDTAAGLLTHVVAHVFD 159



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 6/97 (6%)

Query: 470 KGNDLLSIKAFQYDLVCNGF--EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           + N         +DL+ +G   E+ SG  R      ++      G +      ++    R
Sbjct: 239 RENPQDPGVLRNFDLIAHGGFGELVSGSEREADYATLVTRMRESGENP----AKYDWYLR 294

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             + G+P   G   G+ R+V  L G   + +VS +P 
Sbjct: 295 LMREGLPSSAGFGMGLQRLVRFLTGLDALWQVSAYPK 331


>gi|213863418|ref|ZP_03386673.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
          Length = 71

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 180 FLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
           F+          Y L  AP+ Y + L+  GF+R F+I   FR+E   S R   EF  +++
Sbjct: 1   FITHHNALDLDMY-LRIAPELYLKRLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMEL 58

Query: 240 EMSFVEQDDILNT 252
            M++ +  D++  
Sbjct: 59  YMAYADYHDLIEL 71


>gi|221057065|ref|XP_002259670.1| asparagine--tRNA ligase [Plasmodium knowlesi strain H]
 gi|193809742|emb|CAQ40444.1| asparagine--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 978

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 62/418 (14%), Positives = 118/418 (28%), Gaps = 118/418 (28%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVA--------NPDSACFEIAKSVRSEWVLCI 73
           R+ G V +       IFL +R   GI  +            +   ++  K +R+E V+ I
Sbjct: 228 RIRGRVEQKVKQSKRIFLRLRQEGGIYLICVYEKKGGNTQGEDHLYKYIKKIRNESVVDI 287

Query: 74  DGLVMSRSAETINANIITGQ-------IELSAQ--------------------------- 99
            G V     + I   +   +       IE+  +                           
Sbjct: 288 IGHV-KVHGDLIRCKVPFVESILNEKCIEIVVRSIHCISEAFDDVPVTVNEGRAFWAARA 346

Query: 100 -------------KIEILSVAEELPLPVFGEREYPES----------------------- 123
                        ++     ++    P +G++                            
Sbjct: 347 GVNIGRGDDDGGDELHWGDKSDGGDEPHWGDKSNGGDEPHWGDKSNGGARRPGKINTSEI 406

Query: 124 -IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA----- 177
            ++ ++  L  R    H     + RI   +R  +  + + E  T  +      GA     
Sbjct: 407 ILKMQHPSLHHRHPVNHIIFQMKNRIAQQLRQMLRRDGYTEVFTSKMIDLGRGGALGSAS 466

Query: 178 --RDFLVPS-----------------------------RVNQGSFYALPQAPQQYKQLLM 206
              ++                                    +G    L Q+PQ YKQ+L+
Sbjct: 467 TGGEYTTDDADSASRTISDSMDRCGSFQLNGSEGGSGCYKIEGEEVILAQSPQFYKQMLI 526

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM-SFVEQDDILNTMENVLRGVFEEFS 265
            S F+R F++   +R+E   + R   EF  LD+E   +    +I+  M N+L  + +   
Sbjct: 527 NSDFERIFEMNYSYRNEKFNTSRHLNEFLSLDIEKVIYHNYYEIIIPMYNMLNRINKYIQ 586

Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPG 323
                    L   Y        ++ PD    +      +       R        +P 
Sbjct: 587 E-TFEEELSLISSYFGCENFEPSENPDAPFVLSFCEARDIIDRYSTRFLKNTSDYSPF 643



 Score = 45.8 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 31/113 (27%)

Query: 479 AFQYDLVCNGFEIASGGIRN-HMSEVMLQAFSNVGISKE--------------------- 516
              +D    G EI SG  R  H+  ++ +  ++ G  +                      
Sbjct: 864 TNSFDFFYKGVEIISGSQRINHLPILLFKVLNSCGSVENGHRKLPYPLFIIEKNNFSVSD 923

Query: 517 ---------VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
                      ++       +F+ G  PHGG+A G +R ++  L   NV+   
Sbjct: 924 YLKKCEEVIDRDSTLCKYINSFRFGSKPHGGLALGFERYLLSALNLGNVKRAI 976


>gi|261885903|ref|ZP_06009942.1| aspartyl-tRNA synthetase [Campylobacter fetus subsp. venerealis
          str. Azul-94]
          Length = 60

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/52 (48%), Positives = 36/52 (69%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
          R+H C DL  +D+G  V+L GWV+  R HGG+IF+D+R   GI Q+V +P+ 
Sbjct: 2  RSHYCTDLSSNDIGKIVQLCGWVNSYRDHGGVIFIDLRYRSGIIQLVCDPED 53


>gi|145633225|ref|ZP_01788956.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144986071|gb|EDJ92661.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 87

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           D++  G  EI  G  R    EV+ +    +G++ +             + G  PH G   
Sbjct: 2   DVLAPGIGEIIGGSQREERLEVLDKRMEEMGLNPDDYW----WYRDLRKYGSVPHSGFGL 57

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQN 567
           G +R+++ + G +N+R+V  FP +  
Sbjct: 58  GFERLIVYVTGVQNIRDVIPFPRAPR 83


>gi|119475087|ref|ZP_01615440.1| lysyl-tRNA synthetase-related protein [marine gamma proteobacterium
           HTCC2143]
 gi|119451290|gb|EAW32523.1| lysyl-tRNA synthetase-related protein [marine gamma proteobacterium
           HTCC2143]
          Length = 322

 Score = 73.2 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 16/133 (12%)

Query: 438 MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIR 497
           +D P + ++            +   Q  +     ND   + A +++L  +G E+A+G   
Sbjct: 201 IDVPVFIYD------------YPASQSALAKTVINDEGILVAQRFELYVHGIELANGYFE 248

Query: 498 NHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
              +    + F      +             L  A   G+P   G+A G+DR+VML L  
Sbjct: 249 LTDAGEQEKRFQGEQSMRLALGVEQIEVDIYLLAAMNEGLPSCAGVALGVDRLVMLALQI 308

Query: 554 KNVREVSLFPMSQ 566
           KN+ +V  FP  +
Sbjct: 309 KNIADVMAFPSDR 321



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 73/199 (36%), Gaps = 26/199 (13%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----------QGSFYAL 194
           R  +I  +R        +E  TP+L       AR  +    +            G+FY L
Sbjct: 18  RANVIACIRSFFSQHAVLEVETPLL-------ARHSVTDPYMEILKGDNPLGKSGAFY-L 69

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+   + L+A+G    F+I   FR  +  S   P EF  L+          ++  +E
Sbjct: 70  QTSPEYAMKRLLAAGSGPIFEITKAFRKGEQGSRHNP-EFTLLEWYRPGFNHFQLMTEIE 128

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVF 314
           +++ G+        +    FLR+ Y +  +++    P   +   +  +  + +  + +  
Sbjct: 129 SLVGGLL-------SCDRPFLRMSYGEMFQQFLNINPHTISCDELSALARNTIDVQMQSA 181

Query: 315 SKILSVNPGYEVWAIPAKG 333
            K   +N        P  G
Sbjct: 182 QKDDWLNILLTEIIEPQLG 200


>gi|258625686|ref|ZP_05720565.1| Lysyl-tRNA synthetase-related protein [Vibrio mimicus VM603]
 gi|258581924|gb|EEW06794.1| Lysyl-tRNA synthetase-related protein [Vibrio mimicus VM603]
          Length = 324

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 16/166 (9%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSR 185
           D         + +R  ++  +R      + +E  TP ++ ++           +F+ P  
Sbjct: 5   DWMPTASISQLKQRATLLRQIREFFAERDVLEVETPAMSHATVTDIHLHTFKTEFVGPGY 64

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
             +GS   L  +P+ + + L+A+G    +Q+   FR+E+      P EF  L+      +
Sbjct: 65  A-KGSSLHLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFTMLEWYRIGFD 122

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
              +++ M+ +L+ V            +  R+ Y +A        P
Sbjct: 123 HHALMDEMDALLQLVLR--------CGSAERMTYQEAFLNVLGVCP 160



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G          L  F      +  +
Sbjct: 214 FPASQAALAKINPADPR--VADRFEVYFKGIELANGFHELDNPAEQLARFKADNTKRLEM 271

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 272 GLVEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|213021330|ref|ZP_03335777.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 247

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 62/187 (33%), Gaps = 21/187 (11%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P  K       +  R   DM D D+      D  K  + +       +  LG I    F+
Sbjct: 78  PFEKLTMHEAIKKYRPETDMADLDNF-----DSAKAIAESIGIHVEKSWGLGRIVTEIFD 132

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
                          E  +         P       + ND+      +++    G EI +
Sbjct: 133 EV------------AEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGN 180

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDRIVML 549
           G    + +E   Q F +   +K   ++           A + G+PP  G+  GIDR+VML
Sbjct: 181 GFSELNDAEDQAQRFLDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVML 240

Query: 550 LLGAKNV 556
              +  +
Sbjct: 241 FTNSHTI 247



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 58/153 (37%), Gaps = 20/153 (13%)

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            L+  GF+R F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R + ++
Sbjct: 1   RLVVGGFERVFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQD 59

Query: 264 FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII---MHN-VTEHFVHSEFRVFSKILS 319
                 V               YG +  D   P     MH  + ++   ++        S
Sbjct: 60  VLGTTQVP--------------YGDEVFDFGKPFEKLTMHEAIKKYRPETDMADLDNFDS 105

Query: 320 VNPGYEVWAIPA-KGGGGNRAFCDRMNEWARSQ 351
                E   I   K  G  R   +  +E A + 
Sbjct: 106 AKAIAESIGIHVEKSWGLGRIVTEIFDEVAEAH 138


>gi|5670317|gb|AAD46682.1|AF170910_1 SYNC2 protein [Arabidopsis thaliana]
          Length = 638

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 75/536 (13%), Positives = 163/536 (30%), Gaps = 48/536 (8%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           + +  I D   I+ +    DSA   +  +       CI    + R     +A  +   IE
Sbjct: 139 VFYFLISDGSSISSLQVVVDSALSTVPATQLMALGTCIVAEGVLRLPLAASAKHV---IE 195

Query: 96  LSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155
           L A+K+  +   +    P+  ++  P  +   +     R  T+       + +  +    
Sbjct: 196 LEAEKLLHVGTVDPEKYPLSKKQL-PLHMLRDFSHFRPRTTTVGSVTRVHSALTLASHTF 254

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSR-VNQGSFYALPQAPQQYKQLLMASGFDRYF 214
           +    F     P++T ++  G  +    +    +       + P Q K            
Sbjct: 255 LQYHGFQYVQVPVITTTTGFG--EMFRVTTLFGKTDDKEEKKPPVQEKDGFSIDTVKAV- 311

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR---GVFEEFSNGNTVS 271
            I    R  D        +   +       + +D+ + +E   +   G   +    +   
Sbjct: 312 -IKEKTRLIDHLKRSDSNQETVVAAVHDLKKTNDLASQIEMKQKSKTGTLVKPEKLDFSK 370

Query: 272 NNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPA 331
           + F R  Y  A  R+  +            + + +      +  KI +     E W +  
Sbjct: 371 DFFGRDTYLTASGRFHLESY-------ASALGKVYTFGPRFIADKIDNARHLAEKWNVET 423

Query: 332 KGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRL 391
           +      A  D   + A    +    Y+    DE           K ++    + I  RL
Sbjct: 424 EMA---FAELDDAMDCADEYFKFLCKYVLENRDEDM---------KFISKRVDKTITTRL 471

Query: 392 DMQDGDSCF-FIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEK 450
           +     S   F   + +     A   +     E G+                    +E  
Sbjct: 472 EATASSSLLRFSYTEVISLLQKATTTKFETKPEWGVALTTEH---------LSYLTDEIY 522

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFS 509
           K     + +            +D  ++ A  +DLV      + +G       E++     
Sbjct: 523 KGPVIVHTYPKAIKQFYVRLNDDKKTVAA--FDLVVPKVGVVITGSQNEERFEILDARIG 580

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             G ++     +F       + G   H GI+  ++++++   G  ++++   FP S
Sbjct: 581 ESGFTR----EKFEWYLDLRRHGTVKHSGISLSMEQMLLYATGLPDIKDAIPFPRS 632


>gi|332837318|ref|XP_003313275.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           isoform 1 [Pan troglodytes]
          Length = 250

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 27/157 (17%)

Query: 414 ADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGND 473
           AD R     E  ++        +++++P                PF M            
Sbjct: 118 ADLRTE--HEKYLVKHCGNIPVFVINYPL------------TLKPFYMRDNED------G 157

Query: 474 LLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
                A   DL+  G  E+  GG+R      + +  +  G+++      +       + G
Sbjct: 158 PQHTVA-AVDLLVPGVGELFGGGLREERYHFLEERLARSGLTEV-----YQWYLDLRRFG 211

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             PHGG   G +R +  +LG  N+++V  FP   + C
Sbjct: 212 SVPHGGFGMGFERYLQCVLGVDNIKDVIPFPRFPHSC 248



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRG 259
           M+  F + F   P FR E+ +S R   EFY ++ E+SFV+   D++  +E + + 
Sbjct: 1   MSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVDSLQDLMQVIEELFKA 55


>gi|301155597|emb|CBW15065.1| predicted lysyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 327

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 60/129 (46%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           +N++ R +II  +R        +E  TP+L+              +F+ P      + + 
Sbjct: 18  QNLLARAKIIADIRQFFTERGLLEVETPVLSEFGVTDLHLSTFNTEFVAPFDELSKTLW- 76

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI   FR+E+  +   P EF  L+      +   ++N +
Sbjct: 77  LSTSPEYHMKRLLAAGSGPIFQIGKVFRNEEAGNRHNP-EFTMLEWYRPHFDMYRLMNEV 135

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 136 DDLLQQILD 144



 Score = 70.9 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 75/196 (38%), Gaps = 16/196 (8%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI---AQELGIINCNCFEF 434
           L     + ++  LD +  ++  +             +  R  +   A++   +     + 
Sbjct: 131 LMNEVDDLLQQILDCKPAETLSYQFVFQEYVGLDPLSATRQELVEAARKHNFMADEDEDR 190

Query: 435 CWIMDFPFYEWNE----EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
             ++ F F E  E    +E  +   H P    Q  +  L   D     A +++    G E
Sbjct: 191 DTLLQFLFSEVVEPKIGQEAPVAVYHFP--SSQAALAQLSPEDSR--VAERFEFYYKGLE 246

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVV---ENRFGG-LYRAFQCGMPPHGGIAAGIDRI 546
           +A+G      +      F      +E     +      L  A Q G+P   G+A G+DR+
Sbjct: 247 LANGFHELTDAREQQHRFEQDNRLREKAGLPQREIDHRLLAALQAGIPNTSGVALGVDRL 306

Query: 547 VMLLLGAKNVREVSLF 562
           +M+ LGA++++EV  F
Sbjct: 307 IMIALGAESIKEVISF 322


>gi|197287392|ref|YP_002153264.1| lysyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227358368|ref|ZP_03842708.1| lysyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|238693187|sp|B4EWY8|SYK3_PROMH RecName: Full=Uncharacterized protein YjeA
 gi|194684879|emb|CAR47023.1| putative lysyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227161404|gb|EEI46448.1| lysyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 325

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 10/179 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR--DF---LVPSRVNQGSFYAL 194
            N++K+ +I++++R        +E  TP+++ ++        F    V    +QG    L
Sbjct: 14  ANLLKKAKIVSNIRRFFADRGVLEVETPMMSQATVTDIHLCPFETQFVGPGASQGLKLYL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+     +Q+  CFR+E+      P EF  L+      +   ++N ++
Sbjct: 74  MTSPEYHMKRLLAANSGPIYQMGRCFRNEEAGRYHNP-EFTMLEWYRPCFDMYRLMNEVD 132

Query: 255 NVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR 312
           ++L+ V + E S   +    FLR      I     DK  LR      +++      E R
Sbjct: 133 DLLQEVLDCEASESLSYQQAFLR---YLDIDPLSADKEKLREVAAKLDLSNIADTEENR 188



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 12/112 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML-------QAFSNV 511
           F   Q  +  +   D     A ++++   G E+A+G      ++          +    +
Sbjct: 215 FPASQASLAEISSEDHR--VAERFEVYFKGVELANGFRELTDAKEQRLRFERDNRQRVAM 272

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+ ++ ++ RF     A + G+P   G+A G+DR++ML LG + + +V  FP
Sbjct: 273 GLPEQPIDERF---LAALEAGLPECSGVALGVDRLIMLALGVERISDVIAFP 321


>gi|332534313|ref|ZP_08410156.1| lysyl-tRNA synthetase-like protein [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332036223|gb|EGI72696.1| lysyl-tRNA synthetase-like protein [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 324

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 7/137 (5%)

Query: 132 DLRRDTLHKNIVK-RTRIINSMRCRMIAENFIECSTPILTASSP-----EGARDFLVPSR 185
           DL   +     +K R  I+ S+R    A + +E  TP L+++S             V   
Sbjct: 4   DLWAPSASIETLKQRAAILRSIREFFYARDVMEVETPSLSSASVTDVHLASFNTTFVGPG 63

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G    L  +P+   + L+A+G    FQ+   FR+E+  S   P EF  L+      +
Sbjct: 64  HAGGLPLFLQTSPEFAMKRLLAAGSGAIFQLCKAFRNEEAGSHHNP-EFTMLEWYRPGFD 122

Query: 246 QDDILNTMENVLRGVFE 262
           +  +++ M+ ++R V +
Sbjct: 123 EFALMDEMDELMRLVLD 139



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E    + K  F ++ F   Q  +  +  +D     A +++L     E+A+G      +  
Sbjct: 200 EPTIGQDKPCFVYH-FPASQAALAQICEHDTR--VAGRFELYYKNMELANGFNELTNASE 256

Query: 504 MLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             + F+     +     +       L +A + G+P   G+A GIDR+VML    + +++V
Sbjct: 257 QAKRFNEDNAYRAENGLKQVPMDTRLIKALEHGLPQCAGVALGIDRLVMLATNKEKIKDV 316

Query: 560 SLF 562
             F
Sbjct: 317 IAF 319


>gi|213420287|ref|ZP_03353353.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 193

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 66/199 (33%), Gaps = 28/199 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
           +++      +HL I    A + +L             D  +           +  E  I 
Sbjct: 14  SLSYQQAFLRHLEIDPLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIG 73

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                +  +I  FP                     Q  +  +   D     A ++++   
Sbjct: 74  KE---KPTFIYHFP-------------------ASQASLAQISTEDHR--VAERFEVYYK 109

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGI 543
           G E+A+G      +    Q F      +       +     L  A   G+P   G+A G+
Sbjct: 110 GIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVALGV 169

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR+VML LGA+++ +V  F
Sbjct: 170 DRLVMLALGAESLADVIAF 188


>gi|1435180|emb|CAA61904.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
          Length = 109

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++K      +      
Sbjct: 13  LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYSDL 66

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 67  RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 105


>gi|332158426|ref|YP_004423705.1| asparagine synthetase A [Pyrococcus sp. NA2]
 gi|331033889|gb|AEC51701.1| asparagine synthetase A [Pyrococcus sp. NA2]
          Length = 294

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 77/195 (39%), Gaps = 20/195 (10%)

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA--------SSPEGARDFLVPS 184
           +    ++K I  +T+ ++ M    +   F      +L+          + EG +   V  
Sbjct: 6   IISRDIYKAIELQTKTLDYMTKFFVERGFKWLLPVMLSPITDPLWPDPAGEGVKPLEVEV 65

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDMEMS 242
               G+   L  +   +KQL +A G  + F ++P  R E    D  +   EF QLD E+ 
Sbjct: 66  Y---GTRMRLTHSMILHKQLAIAMGLKKIFVLSPNIRIESRDRDDGKHAYEFTQLDFEIE 122

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNTVS----NNFLRICYDDAIRRYGTDK---PDLRN 295
                D++  +E ++ G+F +             +F    Y D +  +G+D+    ++  
Sbjct: 123 GASMKDVMKLIEELIYGLFRKAEEWTGREFPKARHFKVYEYQDILDEFGSDEKASEEMDE 182

Query: 296 PIIMHNVTEHFVHSE 310
           P  + N+   F   E
Sbjct: 183 PFWIVNIPREFYDRE 197



 Score = 45.1 bits (105), Expect = 0.037,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 7/86 (8%)

Query: 482 YDLV--CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG-MPPHGG 538
           YDL+      E++SGG R    E +L+     G++    E  F       + G + P  G
Sbjct: 205 YDLILPYGYGEVSSGGEREWEYEKILRKIRASGLN----EESFRPYLEIAKAGKLKPSAG 260

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPM 564
              G++R+V  ++G K++ EV  FP 
Sbjct: 261 AGIGVERLVRFIVGVKHIAEVQPFPR 286


>gi|323165009|gb|EFZ50799.1| OB-fold nucleic acid binding domain protein [Shigella sonnei 53G]
 gi|332757613|gb|EGJ87946.1| OB-fold nucleic acid binding domain protein [Shigella flexneri
          2747-71]
 gi|332766843|gb|EGJ97044.1| OB-fold nucleic acid binding domain protein [Shigella flexneri
          2930-71]
          Length = 85

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGL 76
          G  V L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G 
Sbjct: 2  GQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGT 61

Query: 77 VMSRSAE 83
          V +R  +
Sbjct: 62 VRARDEK 68


>gi|255645475|gb|ACU23233.1| unknown [Glycine max]
          Length = 221

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 4/100 (4%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           ND L   A    LV    E+  G       +V+      +G+  E  E          + 
Sbjct: 126 NDDLKTVAAMDVLVPKVGELIGGSQMEERYDVIQTRIKEMGLPVEPYE----WYLDLRRY 181

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           G   H G   G +R++    G +N+R+V  FP      DL
Sbjct: 182 GTVKHAGFGLGFERMIFFATGLENIRDVIPFPRYPGRADL 221


>gi|262401943|ref|ZP_06078508.1| lysyl-tRNA synthetase-related protein [Vibrio sp. RC586]
 gi|262351915|gb|EEZ01046.1| lysyl-tRNA synthetase-related protein [Vibrio sp. RC586]
          Length = 318

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 61/153 (39%), Gaps = 16/153 (10%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYALPQAP 198
           R  ++  +R      + +E  TP ++ ++           +F+ P    +GS   L  +P
Sbjct: 12  RATLLRQIREFFAERDVMEVETPAMSHATVTDIHLHTFKTEFVGPGYA-KGSSLHLMTSP 70

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+A+G    +Q+   FR+E+      P EF  L+      +   +++ M+ +L+
Sbjct: 71  EFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFTMLEWYRIGFDHHSLMDEMDALLQ 129

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            V            +  R+ Y  A        P
Sbjct: 130 LVLR--------CGSAERMTYQAAFLNVLGVCP 154



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G          L  F      +  +
Sbjct: 208 FPASQAALAKINPADPR--VADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEM 265

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 266 GLAEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 314


>gi|323940077|gb|EGB36271.1| tRNA synthetase class II [Escherichia coli E482]
          Length = 303

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  ++K  F ++ F   Q  +  +   D     A ++++   G E+A+G      +  
Sbjct: 179 EPNIGKEKPTFVYH-FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDARE 235

Query: 504 MLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +             L  A + GMP   G+A G+DR+VML LGA+ + EV
Sbjct: 236 QQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEV 295

Query: 560 SLF 562
             F
Sbjct: 296 IAF 298



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 51/119 (42%), Gaps = 6/119 (5%)

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-----NQGSFYALPQAPQQYKQ 203
           +  +R        +E  TP ++ ++          +R      +QG    L  +P+ + +
Sbjct: 1   MAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMK 60

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            L+ +G    FQ+   FR+E+      P EF  L+      +   ++N ++++L+ V +
Sbjct: 61  RLLVAGCGPVFQLCRSFRNEEMGRYHNP-EFTMLEWYRPHYDMYRLMNEVDDLLQQVLD 118


>gi|308048215|ref|YP_003911781.1| lysyl-tRNA synthetase-related protein GenX [Ferrimonas balearica
           DSM 9799]
 gi|307630405|gb|ADN74707.1| lysyl-tRNA synthetase-related protein GenX [Ferrimonas balearica
           DSM 9799]
          Length = 323

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           F   Q  +  +   D     A ++++   G E+A+G      ++     F      +   
Sbjct: 213 FPASQAALARIDEQDPR--VARRFEVYFKGVELANGFHELADADEQRARFVADNAQRAAH 270

Query: 518 ---VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                     L  A   G+P   G+A GIDR+VML L AK +++V  FP
Sbjct: 271 GLPQRPIDEHLIAALAAGLPDCAGVALGIDRLVMLALDAKAIKDVIPFP 319



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 54/150 (36%), Gaps = 22/150 (14%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN---------QGSFYALP 195
           R +++  +R         E  TP L+      A   +     +         +G    L 
Sbjct: 17  RAQLMGRIRDFFAERGVWEVETPCLSQ----AAVTDVHLHNFDTRFVGPGAAEGIPLYLM 72

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+ +G    FQ+   FR+E+      P EF  L+      +   +++ M +
Sbjct: 73  TSPEYHMKRLLCAGSGSIFQLCRSFRNEEAGRFHNP-EFTMLEWYRVGFDHHALMDEMAD 131

Query: 256 VLRGVFEEFSNGNTVSNNFLRICYDDAIRR 285
           +L+ V               R+ Y  A  +
Sbjct: 132 LLQAVL--------GCGAPQRMTYAQAFEQ 153


>gi|213027424|ref|ZP_03341871.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 179

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++K      +      
Sbjct: 83  LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDL 136

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 137 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 175


>gi|167947824|ref|ZP_02534898.1| aspartyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 113

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 30/87 (34%)

Query: 294 RNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ 353
             P+ + ++ +     EF VFS       G         G   +R   D   ++    G 
Sbjct: 9   ECPLELIDLRDLMQDVEFTVFSAPAKDPHGRVAALHVPGGCKLSRKEIDAYTKFVGIYGA 68

Query: 354 PGLAYIFWRLDESGNVAGMGPVAKHLN 380
            GLAYI       G      P+ K L+
Sbjct: 69  RGLAYIKVNEAPKGRDGLQSPILKFLH 95


>gi|325579193|ref|ZP_08149149.1| lysine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159428|gb|EGC71562.1| lysine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 333

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           KN++ R +II  +R        +E  TP+L+              +F+ P      + + 
Sbjct: 24  KNLLARAKIIADIRQFFTERGLLEVETPVLSEFGVTDLHLSTFNTEFVAPFDELSKTLW- 82

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI   FR+E+  +   P EF  L+      +   ++N +
Sbjct: 83  LSTSPEYHMKRLLAAGSGPIFQIGKVFRNEEAGNRHNP-EFTMLEWYRPHFDMYRLMNEV 141

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 142 DDLLQQILD 150



 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 82/199 (41%), Gaps = 22/199 (11%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI---AQELGIINCNCFEF 434
           L     + ++  LD +  ++  +             +  R  +   A++   +     + 
Sbjct: 137 LMNEVDDLLQQILDCKPAETLSYQFVFQEYVGLDPLSATRQELVEVARKHNFMADEDEDR 196

Query: 435 CWIMDFPFYEWNE----EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
             ++ F F E  E    +E  +   H P    Q  +  L   D     A +++    G E
Sbjct: 197 DTLLQFLFSEVVEPKIGQETPVAVYHFP--SSQAALAQLSPEDSR--VAERFEFYYKGLE 252

Query: 491 IASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           +A+G         + H  E   +  +  G+ +  +++RF     A Q G+P   G+A G+
Sbjct: 253 LANGFHELTDAREQQHRFEQDNRLRARAGLPQREIDHRF---LAALQAGIPNTSGVALGV 309

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR++M+ LGAK+++EV  F
Sbjct: 310 DRLIMIALGAKSIKEVISF 328


>gi|149192250|ref|ZP_01870464.1| lysyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148833923|gb|EDL50946.1| lysyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 290

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 76/234 (32%), Gaps = 37/234 (15%)

Query: 334 GGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDM 393
           G  +    D M+E         L  +    D +  +        HL +    A    L  
Sbjct: 86  GFDHHQLMDEMDE---------LLRMVLACDGAERMTYQQAFMTHLEVCPLVASMPELLT 136

Query: 394 QDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID 453
             G        D  +           +  E  I         ++ DFP            
Sbjct: 137 AAGSLGLSDIADKEQDRDTLLQLLFSMGVETKI---GQDVPAFVYDFP------------ 181

Query: 454 FAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
                    Q  +  +  ND     A ++++   G E+A+G          L  F     
Sbjct: 182 -------ASQAALAKVNPNDER--VADRFEVYFKGIELANGFHELDNPNEQLARFEEDNR 232

Query: 514 SKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            ++ +    +     L  A + G+P   G+A GIDR++ML LGAK++ EV  FP
Sbjct: 233 KRQQMGLPQQPIDYHLIDALKSGIPACAGVALGIDRLIMLALGAKHIDEVVAFP 286



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 55/136 (40%), Gaps = 16/136 (11%)

Query: 162 IECSTPILTASSPEGA------RDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ 215
           +E  TP ++ ++           +F+ P   +    Y +  +P+ + + L+A+G    +Q
Sbjct: 1   MEVDTPAMSHATVTDIHLHTFQTEFVGPGYADGRKLYFM-TSPEFHMKRLLAAGSGSIYQ 59

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           I   FR+E+      P EF  L+      +   +++ M+ +LR V           +   
Sbjct: 60  INKAFRNEESGRYHNP-EFTMLEWYREGFDHHQLMDEMDELLRMVL--------ACDGAE 110

Query: 276 RICYDDAIRRYGTDKP 291
           R+ Y  A   +    P
Sbjct: 111 RMTYQQAFMTHLEVCP 126


>gi|332211191|ref|XP_003254703.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           isoform 2 [Nomascus leucogenys]
          Length = 250

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 25/137 (18%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIA 492
             +++++P             A  PF M                 A   DL+  G  E+ 
Sbjct: 136 PVFVINYPL------------ALKPFYMRDNED------GPQHTVA-AVDLLVPGVGELF 176

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            GG+R      + +  +  G+++      +       + G  PHGG   G +R +  +LG
Sbjct: 177 GGGLREERYHFLEERLARSGLTEV-----YQWYLDLRRFGSVPHGGFGMGFERYLQCILG 231

Query: 553 AKNVREVSLFPMSQNFC 569
             N+++V  FP     C
Sbjct: 232 VDNIKDVIPFPRFPRSC 248



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRG 259
           M+  F + F   P FR E+ +S R   EFY ++ E+SFV+   D++  +E + + 
Sbjct: 1   MSGAFTQVFAFGPTFRAENSQSRRHLAEFYMIEAEISFVDSLQDLMQVIEKLFKA 55


>gi|170289793|ref|YP_001736609.1| asparagine synthetase A [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170173873|gb|ACB06926.1| Aspartyl/asparaginyl-tRNA synthetase [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 372

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 60/141 (42%), Gaps = 10/141 (7%)

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL---TASSPEGARDFLVPSRVNQGSF 191
              + +    R  I  ++R  +  E F+E    ++   T     GA +F +P     G  
Sbjct: 37  HPIMQEVYRFRHIIARAVRDFLDKEGFVEFDPIMIGPVTDPGTRGAYEFRIPYY---GRE 93

Query: 192 YALPQAPQQYKQLLMASGFD-RYFQIAPCFRDEDPR---SDRLPGEFYQLDMEMSFVEQD 247
           Y + ++   YKQLL A+  + + +   P  R E      + R   EF Q+D+E+   +  
Sbjct: 94  YRIMRSGILYKQLLAAAMEEGKVYFFYPNLRHEPLDAGKTGRHLVEFVQIDLEVRDADHL 153

Query: 248 DILNTMENVLRGVFEEFSNGN 268
           +++   E +++ V +   +  
Sbjct: 154 EVMKIAERLIKHVIDHLRDYE 174



 Score = 38.9 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 6/92 (6%)

Query: 482 YDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
           +DL+      E++SG  R + +  +       G + E+ +     L    +    P  G 
Sbjct: 285 FDLLAPEGHGELSSGAAREYDASRVFARMKESGENPELYKWYLEFLRDHGR----PTAGF 340

Query: 540 AAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
             G++R+V  +    +V      P        
Sbjct: 341 GIGMERLVKYICDLPSVHLARPAPKVPGVHSP 372


>gi|148255401|ref|YP_001239986.1| putative lysyl-tRNA synthetase (lysine--tRNA ligase)
           [Bradyrhizobium sp. BTAi1]
 gi|146407574|gb|ABQ36080.1| Putative lysyl-tRNA synthetase (Lysine--tRNA ligase)
           [Bradyrhizobium sp. BTAi1]
          Length = 351

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 54/140 (38%), Gaps = 12/140 (8%)

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
            R  D+R       +  R  I+ ++R     + F E  T IL  S P        P+   
Sbjct: 15  QRHADVRP-----FLQARAAIMRAVRAWFAEQGFTEVETGILQVS-PGNETHLHAPATEL 68

Query: 188 QGSF-----YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            G+        L  +P+   + L+A+G  R F+ A  FRD + R D    EF  L+   +
Sbjct: 69  TGADGTRLKRYLRTSPEFACKKLLAAGERRIFEFARVFRDRE-RGDLHLPEFTMLEWYRA 127

Query: 243 FVEQDDILNTMENVLRGVFE 262
               D I+     ++    +
Sbjct: 128 EAPYDAIMADAVVLIAHAAQ 147



 Score = 43.9 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 3/88 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG---MPP 535
           A ++++   G E+A+G      +    + F      K+        L   F      MP 
Sbjct: 259 AERFEVYACGVELANGFGELTDAAEQRRRFEQDMTEKQRRYGERYPLDEDFLAAVAEMPQ 318

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             G+A G DR+VML  GA  + +V   P
Sbjct: 319 ASGVALGFDRLVMLASGAARIDQVVWTP 346


>gi|88798860|ref|ZP_01114442.1| lysyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88778340|gb|EAR09533.1| lysyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 316

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 10/92 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS-------NVGISKEVVENRFGGLYRAFQC 531
           A +++L   G E+A+G      ++   + F          G +   ++ RF     A   
Sbjct: 224 ARRFELFWGGMELANGYYELTDAQEQAKRFEQDCQDRLANGQAIPKLDERF---LAALSQ 280

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           GMP   G+A G+DR++M LLG  ++ EV  FP
Sbjct: 281 GMPECSGVALGLDRLIMKLLGKAHIDEVVAFP 312



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 59/157 (37%), Gaps = 21/157 (13%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF-----YAL 194
           + + +R  I+  +R        +E  TPIL++            + VN  ++       L
Sbjct: 13  QTLRRRAEILAEIRRYFQQHQVLEVETPILSSYGG---------TDVNLDAWQTAEGLTL 63

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+   + L+A+G    +QI   FR ++      P EF  L+      +++++++ + 
Sbjct: 64  HTSPEFAMKRLLAAGSGDIYQICRVFRQDEQGQRHQP-EFTMLEWYRVGFQENELMDDVA 122

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            ++  V                I Y  A    G   P
Sbjct: 123 TLIEHV------SGIRELPRQVITYAQAFEAQGLPDP 153


>gi|157831623|pdb|1KRS|A Chain A, Solution Structure Of The Anticodon Binding Domain Of
           Escherichia Coli Lysyl-Trna Synthetase And Studies Of
           Its Interactions With Trna-Lys
 gi|157831624|pdb|1KRT|A Chain A, Solution Structure Of The Anticodon Binding Domain Of
           Escherichia Coli Lysyl-Trna Synthetase And Studies Of
           Its Interactions With Trna-Lys
          Length = 120

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 15/113 (13%)

Query: 5   RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           R H+   L     G            V ++G +   R  G   F+ ++D  G  Q+    
Sbjct: 13  RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVAR 72

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
           D     +      +W L   G ++    +       TG++ +   ++ +L+ A
Sbjct: 73  DDLPEGVYNEQFKKWDL---GDILGAKGKLF--KTKTGELSIHCTELRLLTKA 120


>gi|154246471|ref|YP_001417429.1| lysine--tRNA ligase [Xanthobacter autotrophicus Py2]
 gi|154160556|gb|ABS67772.1| Lysine--tRNA ligase [Xanthobacter autotrophicus Py2]
          Length = 363

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 14/165 (8%)

Query: 104 LSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIE 163
           +S     P P       P     +    D RR      ++ R R++ ++R R+  E FIE
Sbjct: 3   VSTPGTSPDPSANPSPNPSPWWSRSVHAD-RRP----FLLARGRMMAAIRARLAGEGFIE 57

Query: 164 CSTPILTASSP------EGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIA 217
             TP L  S          A D + P    +     L  +P+   + L+A+G ++ F+ A
Sbjct: 58  VETPALQVSPGNEAHLHAFATDLIGPDGARRT--LYLRTSPEFASKKLLAAGEEQIFEFA 115

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
             FR+ +      P EF  L+   +    + +++    +L    E
Sbjct: 116 RVFRNRERGMAHHP-EFTLLEWYRAGAPYNRLMDDCAGLLACAAE 159



 Score = 39.3 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 5/104 (4%)

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-VGISKEVVENR 521
           +  +   K  D     A +++L   G E+A+       ++   + F   +   + +   R
Sbjct: 260 EAALARPKPEDPR--FAERFELYACGLELANAFGELTDADEQRRRFEEEMDEKERLYGER 317

Query: 522 F--GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +     + A    MPP  G A G DR+ +L  GA+ + +V   P
Sbjct: 318 YPIDADFLAALAAMPPASGCALGFDRLAVLASGARRIEDVLWAP 361


>gi|284008646|emb|CBA75269.1| lysyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 326

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 16/158 (10%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYA 193
            N++KR +II  +R   I    +E  TPIL+  +            F+ P   +    Y 
Sbjct: 14  NNLLKRAKIIAEIRRFFIDRGVVEVETPILSKFTVTDIHLSPFETQFIAPVIADSTKLY- 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           +  +P+ + + L+A+G    +QI   FR+E+      P EF  L+      +   +++ +
Sbjct: 73  MITSPEYHMKRLLAAGSGPIYQIIKAFRNEEEGRYHNP-EFTMLEWYRPHYDMYRLIDEV 131

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           +++L+ + +             RI Y  A +RY    P
Sbjct: 132 DDLLQQILD--------CQPTERISYQQAFQRYLNIDP 161



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 78/202 (38%), Gaps = 25/202 (12%)

Query: 379 LNIVNTEAIRVRLDMQDGDSCFFIAG-------DPLKFCSFAADARNHIAQELGIINCNC 431
           L     + ++  LD Q  +   +          DPL   S     R+  A +LG+ N   
Sbjct: 127 LIDEVDDLLQQILDCQPTERISYQQAFQRYLNIDPLALESERKQLRDA-AVKLGLNNAET 185

Query: 432 -------FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
                   +F + M     E N  + K    ++ F   Q  +  +   D     A ++++
Sbjct: 186 EEDKDVLLQFLFTMG---VEPNLGKDKPTVIYH-FPASQAALAEISKEDHR--VAERFEV 239

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIA 540
              G E+A+G      ++   + F +    +E +    +     L  A    +P   G+A
Sbjct: 240 YFKGIELANGFRELTDAQEQRERFEHDNQIREKMGLPEQPIDECLLAALDKVIPDCSGVA 299

Query: 541 AGIDRIVMLLLGAKNVREVSLF 562
            GIDR+VML L A+ + +V  F
Sbjct: 300 LGIDRLVMLALNAEKISDVISF 321


>gi|169599773|ref|XP_001793309.1| hypothetical protein SNOG_02712 [Phaeosphaeria nodorum SN15]
 gi|160705320|gb|EAT89443.2| hypothetical protein SNOG_02712 [Phaeosphaeria nodorum SN15]
          Length = 537

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/337 (16%), Positives = 102/337 (30%), Gaps = 54/337 (16%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G+ VR+ G VHR R    ++F+ +RD YG  QVV     A    A ++  E  + I G +
Sbjct: 148 GTRVRVFGRVHRERRQKEVMFITLRDGYGYMQVVITGKLAKTYDALTLTRETSMEILGEL 207

Query: 78  MSRSAETINANIITGQIELSAQKIEIL----SVAEELPLPVFGEREYPESIRFKYRFLDL 133
               A     N      EL A   +I     +   +  +     ++   +     R L L
Sbjct: 208 REVPAGAHAPNNR----ELQADFYKIHDGWQAAGGDDAITNRVSKDTEHATLLDLRHLTL 263

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R +T  K ++ R  +  +       +                                  
Sbjct: 264 RGETASKVMIVRDAVEFAFNQVYREQ---------------------------------R 290

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L ++ Q Y +  + S     + I   F   +       G    ++ +      ++++  +
Sbjct: 291 LRKSSQLYLETCLPS-MGDVYCIEKSFPRREVTDPPPSGRLDYINFDDLLTHLEEVMCRV 349

Query: 254 ENVL-------RGVFEEFSNGNTVSNNFLRICYDDAIRR---YGTDKPDLRNPIIMHNVT 303
             V        + + +           F R+ Y DAI     +     D        ++ 
Sbjct: 350 IEVTMSDPVVKQHIADLNPEFAMPERPFKRMKYQDAIDWLVEHNIPNEDGEPHKFGDDIA 409

Query: 304 EHFVHSEFRVFSKI--LSVNPGYEVWAIPAKGGGGNR 338
           E        + ++   L+  P         K     R
Sbjct: 410 EAAERRMTDIINRPIFLTHFPTEIKAFYMLKDKEDPR 446



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 42/122 (34%), Gaps = 5/122 (4%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
            +  F  +  T  +         D    ++    L+    EI  G +R    + ++ AF+
Sbjct: 421 NRPIFLTHFPTEIKAFYMLKDKEDPRVTESVDC-LMPGVGEIVGGSMRMDNYDELMAAFA 479

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
              I        +       + G  PHGG   G++R +  L     VR+  L+P     C
Sbjct: 480 REQIDPAA----YYWYTDQRKYGSSPHGGYGLGLERFLAWLCKQHTVRDCCLYPRYFGRC 535

Query: 570 DL 571
             
Sbjct: 536 KP 537


>gi|240947998|ref|ZP_04752416.1| lysyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240297668|gb|EER48142.1| lysyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 327

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 12/153 (7%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEE----EKKIDFAHNPFTMPQGGMESLKGND 473
              A++ G+   +      ++ F F E  E     E+     H P T  Q  +  +   D
Sbjct: 174 VEKARKHGLQCDDDENRDTLLQFLFSEIVEANIGKERPTAVYHFPST--QAALAQVSSED 231

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAF 529
                + +++    G E+A+G      ++  ++ F+   + +E +    +        A 
Sbjct: 232 HR--VSERFEFYYKGLELANGFHELDDAQEQIRRFNADNVEREKMGLPPQALDVRFLAAL 289

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           + GMP   G+A G+DR++ML LGA++++EV  F
Sbjct: 290 EAGMPNCSGVALGVDRLIMLALGAEHIKEVISF 322



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 54/124 (43%), Gaps = 6/124 (4%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGA-----RDFLVPSRVNQGSFYALPQAP 198
           KR +I+  +R        +E  TP+L+  S             +     +     L  +P
Sbjct: 22  KRAKIMKEIRQFFSDRGVLEVETPVLSEFSVTDVHLSTFSTQFLSPFEREAKPLYLMTSP 81

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+A+G    +Q+   FR+E+      P EF  L+    + +   ++N ++++L+
Sbjct: 82  EYHMKRLLAAGSGAIYQLCKVFRNEEAGKRHNP-EFTMLEWYRPYFDMYRLINEVDDLLQ 140

Query: 259 GVFE 262
            + +
Sbjct: 141 QILD 144


>gi|224532935|ref|ZP_03673545.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi WI91-23]
 gi|224512134|gb|EEF82525.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi WI91-23]
          Length = 253

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 56/174 (32%), Gaps = 23/174 (13%)

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
                A    + +   P FR E+  + R   EF+ ++ EM+F + +D +   E++L+ + 
Sbjct: 2   HGEAYAMALSKIYTFGPTFRAENSNTTRHASEFWMIEPEMAFYKLNDNIALAEDLLKYLL 61

Query: 262 EEFSNGNTVSNNFLR---------------------ICYDDAIRRYGTDKPDLR-NPIIM 299
               N  +   +FL                      I Y  AI      K      P   
Sbjct: 62  SSILNECSQDMDFLENYIEKGLIKKLENVINSNFEVITYTKAIEILENSKKKFEIKPYWG 121

Query: 300 HNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
            ++ T+H  +     F K + V    + +         +      M+      G
Sbjct: 122 IDLQTDHERYLTEETFKKPVVVIDYPKNFKAFYMKANKDNKTVKGMDILVPKIG 175



 Score = 67.0 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           LV    EI  G  R    + +      + ++               + G  PH G   G+
Sbjct: 170 LVPKIGEIIGGSEREDDLQKLENRIKELNLNI----EHLNWYLDLRRFGSAPHSGFGLGL 225

Query: 544 DRIVMLLLGAKNVREVSLFPMSQN 567
           +R+V    G  N+R+   FP +  
Sbjct: 226 ERLVQYSTGISNIRDSIPFPRTPK 249


>gi|297526478|ref|YP_003668502.1| tRNA synthetase class II (D K and N) [Staphylothermus hellenicus
           DSM 12710]
 gi|297255394|gb|ADI31603.1| tRNA synthetase class II (D K and N) [Staphylothermus hellenicus
           DSM 12710]
          Length = 478

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 63/320 (19%), Positives = 112/320 (35%), Gaps = 43/320 (13%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT     L        V +  W+        I+F   RD  GI   +        +  KS
Sbjct: 55  RTILLKHLKQCRDSRAVEIIAWIADKTGD-KIVF---RDPSGI--ELFKLRGIGSDRIKS 108

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +  E +L + G+V   +   ++  +I   +E    K           +   G  +Y ++ 
Sbjct: 109 LPLETLLWLKGIVADDTIIVVDYKVIHKPVEERIIKYT--------RIDHIGLTDYAKNY 160

Query: 125 RFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPE--GARDFL 181
            +       R   +   I   + +    R  + ++ FIE   P++  AS P   GA    
Sbjct: 161 AW-----YFRNPKISSTIKLLSYVTRYSRGILYSKGFIELLPPMISVASDPGLRGAGKLK 215

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR---SDRLPGEFYQLD 238
                  G  Y L  +   +KQ   A+ +++ F  A   R+E P    + R   EF QLD
Sbjct: 216 TKYY---GETYELTSSVIMFKQ-ASAAVYEKVFFTARNIREEPPENIWTGRHLSEFTQLD 271

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTV--------------SNNFLRICYDDAIR 284
           +E +    +D++   E +L  V +  ++                     F RI YD+A+ 
Sbjct: 272 IEWAMSGLEDVMRLAEELLYNVSKTIADKYMDLIYDIGERKEPVILKPPFPRIRYDEALE 331

Query: 285 RYGTDKPDLRNPIIMHNVTE 304
                   +     + +  E
Sbjct: 332 LAEKLGEPVEWGKELTHTAE 351



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 48/168 (28%), Gaps = 29/168 (17%)

Query: 403 AGDPLKFCSFAADARNHIAQELGIINCNCFE-----FCWIMDFPFYEWNEEEKKIDFAHN 457
             + L+      +      +EL                WI+ +P                
Sbjct: 326 YDEALELAEKLGE-PVEWGKELTHTAETRIAEYYDSPVWIIGYP------------AISR 372

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
            F       +     D   +    Y     G  I  G       +++ +           
Sbjct: 373 GFYYLPDRDDPRYNLDFNLLLPEGY-----GEVIDGGAREYRYPQIVERIRKL-----GE 422

Query: 518 VENRFGGLYRAFQCG-MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             +++G      + G +PP  G   G++R+   L G K+V   ++FP 
Sbjct: 423 PLHKYGWFIELVKQGGIPPSSGWGLGLERLTRYLAGHKHVGYATIFPK 470


>gi|320089973|gb|ADW08470.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae]
          Length = 202

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++K      +      
Sbjct: 106 LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDL 159

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 160 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 198


>gi|12851415|dbj|BAB29032.1| unnamed protein product [Mus musculus]
          Length = 251

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 16/165 (9%)

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
           ++ Q Y +  +       F IA  +R E  R+ R   EF  ++ E  F+  +D+LN +E+
Sbjct: 1   ESSQLYLETCLP-ALGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLNRLED 59

Query: 256 VLRGVFEEFS-------------NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNV 302
           ++  V +                N       F R+ Y DAI           +    +  
Sbjct: 60  LVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMNYSDAIEWLKEHDVKKEDG-TFYEF 118

Query: 303 TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD-RMNE 346
            +    +  R+ +  ++       + +  K     R   D R+ E
Sbjct: 119 GDDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDPRLTE 163



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R+  SE +L+ +   GI        +       + G  PHGG   G+
Sbjct: 168 LMPNVGEIVGGSMRSWDSEEILEGYKREGIDPAP----YYWYTDQRKYGTCPHGGYGLGL 223

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R +  +L   ++R+V L+P 
Sbjct: 224 ERFLSWILNRYHIRDVCLYPR 244


>gi|213648692|ref|ZP_03378745.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 184

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              D  ++ A   D++  G  EI  G  R    +V+    + +G++K      +      
Sbjct: 88  LNEDGKTVAAM--DVLAPGIGEIIGGSQREERLDVLDARMAEMGLNK----EDYWWYRDL 141

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 142 RRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPR 180


>gi|213026923|ref|ZP_03341370.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 153

 Score = 72.0 bits (175), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 6/108 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           F   Q  +  +   D     A ++++   G E+A+G      +    Q F      +   
Sbjct: 43  FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAAR 100

Query: 518 ---VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               +     L  A   G+P   G+A G+DR+VML LGA+++ +V  F
Sbjct: 101 GLPQQPIDQNLLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAF 148


>gi|289804400|ref|ZP_06535029.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 167

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 6/108 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           F   Q  +  +   D     A ++++   G E+A+G      +    Q F      +   
Sbjct: 57  FPASQASLAQISTEDHR--VAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAAR 114

Query: 518 ---VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               +     L  A   G+P   G+A G+DR+VML LGA+++ +V  F
Sbjct: 115 GLPQQPIDQNLLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAF 162


>gi|332290050|ref|YP_004420902.1| lysyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330432946|gb|AEC18005.1| lysyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 325

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 65/160 (40%), Gaps = 26/160 (16%)

Query: 418 NHIAQELGIINCN--------CFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
              A+  G++N +         + F  ++     E N  +++    ++ F   Q  +  +
Sbjct: 172 VEKAKAQGLVNADMEGRDTLLQYLFSEVV-----EKNIGQERPIAVYH-FPSAQAALAQI 225

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV-------GISKEVVENRF 522
              D     A +++    G E+A+G      +   +  F           +  + +++RF
Sbjct: 226 SSEDHR--VAERFEFYYKGLELANGFHELTDANEQMHRFEQDNLLREKLHLPPQQMDSRF 283

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                A + GMP   G+A G+DR++M+ L   N+ +V  F
Sbjct: 284 ---LAALKSGMPSCSGVALGVDRLLMIALSTDNIEDVISF 320



 Score = 70.5 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 9/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYA 193
           +N++KR +II  +R   +    +E  TPIL+  S           +F  P   +Q     
Sbjct: 17  QNLLKRAKIIADIRQFFVDRGLLEVETPILSEFSVTDVHLSTFQTEFTPP--FDQKKTLH 74

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A G    FQI   FR+E+      P EF  L+    F +   ++N +
Sbjct: 75  LITSPEYHMKRLLAEGSGPIFQICKVFRNEEAGKRHNP-EFTMLEWYRPFFDMYRLINEV 133

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 134 DDLLQQILD 142


>gi|251793016|ref|YP_003007742.1| lysyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534409|gb|ACS97655.1| putative lysyl-tRNA synthetase-like protein GenX [Aggregatibacter
           aphrophilus NJ8700]
          Length = 323

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 6/108 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   DL    A +++    G E+A+G      +   L+ F    + +E +
Sbjct: 213 FPASQAALAQISSEDLR--VAERFEFYYKGLELANGFHELSDAREQLRRFQQDNLQREKM 270

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                     L  A Q G+P   G+A G+DR++M+ +G +++REV  F
Sbjct: 271 GLPVRAIDTRLLAALQAGIPNCSGVALGVDRLLMIAMGTESIREVISF 318



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-----EGARDFLVPSRVNQGSFYAL 194
           KN++ R +++  +R        +E  TP+L+                +     Q     L
Sbjct: 14  KNLLTRAKLLAEIRRFFTDRGLLEVETPVLSEFGVTDVHLATFSTEFISPFGEQSKTLWL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    FQI   FR+E+  +   P EF  L+      +   ++N ++
Sbjct: 74  STSPEYHMKRLLAAGSGPIFQIGKVFRNEEAGNRHNP-EFTMLEWYRPHFDMYRLINEVD 132

Query: 255 NVLRGVFE 262
           ++L+ + E
Sbjct: 133 DLLQQILE 140


>gi|42522288|ref|NP_967668.1| lysyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|39574819|emb|CAE78661.1| lysyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
          Length = 405

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 75/219 (34%), Gaps = 17/219 (7%)

Query: 149 INSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRV--NQGSFYALPQAPQQYKQLL 205
           + S+R   +++ F+E  TP L      E + D    +    ++     LP +P+ + +  
Sbjct: 103 LQSLREFFVSKGFVELKTPSLVVCPGTEPSLDVFSTNLKIGSRQQKLFLPTSPELHLKKA 162

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           +A G ++ F++APCFR+ +  ++R   EF  L+   ++     I      ++  + +   
Sbjct: 163 LALGAEKIFELAPCFRNGEV-TERHQPEFLMLEWYRAYASLKLIKEDTVKLVSHLAQAMK 221

Query: 266 NGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM-------------HNVTEHFVHSEFR 312
               V      +     I      KPD     +               ++ ++F      
Sbjct: 222 VAGPVKVTSYSVAELFKIHCGFELKPDTSKEELKTLAEKIGVDVRSAESIDDYFFLIFMD 281

Query: 313 VFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQ 351
                L  +    V   P       R   D   +   + 
Sbjct: 282 KIESQLPADELVFVEKYPPYQAALARLTSDGWGDRFEAY 320



 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 10/92 (10%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVM-------LQAFSNVGISKEVVENRFGGLYRAFQC 531
             +++    G E+ +     +   V        LQ  S +      +++ F   ++  + 
Sbjct: 314 GDRFEAYWKGMELCNAFHELNDPTVQRLRSQEDLQKKSEMHKEPVSLDDEF---FQCLEA 370

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+PP GGIA G++R+ M LLG +N+ ++ LFP
Sbjct: 371 GLPPSGGIALGVERLFMALLGLQNISDLRLFP 402


>gi|307127750|ref|YP_003879781.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306484812|gb|ADM91681.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 217

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 14/122 (11%)

Query: 452 IDFAHNPFTMPQ--GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
              A   F M    G  E +   DLL+ + +         EI  G +R    + ++    
Sbjct: 108 YPAAIKAFYMKPVPGNPERVLCADLLAPEGYG--------EIIGGSMREEDYDALVAKMD 159

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            +G+ +   E          + G  PHGG   GI+R+V    G K++RE   FP   +  
Sbjct: 160 ELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRMLHRI 215

Query: 570 DL 571
             
Sbjct: 216 KP 217


>gi|315633844|ref|ZP_07889133.1| lysine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315477094|gb|EFU67837.1| lysine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 323

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 58/147 (39%), Gaps = 14/147 (9%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSP-----EGARDFLVPSRVNQGSFYALPQAPQ 199
           R ++I  +R        +E  TP+L+                V     Q     L  +P+
Sbjct: 19  RAKLIAEIRRFFTDRGLLEVETPVLSEFGVTDLHLATFSTEFVSPFGEQSKTLWLSTSPE 78

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
            + + L+A+G    FQI   FR+E+  +   P EF  L+      +   ++N ++++L+ 
Sbjct: 79  YHMKRLLAAGSGPIFQIGKVFRNEEAGNRHNP-EFTMLEWYRPHFDMYRLINEVDDLLQQ 137

Query: 260 VFEEFSNGNTVSNNFLRICYDDAIRRY 286
           + E              + Y  A ++Y
Sbjct: 138 ILE--------CPPPESMSYQFAFQQY 156



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 61/157 (38%), Gaps = 20/157 (12%)

Query: 418 NHIAQELGIINCNC--------FEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
              A++  +++           F F  ++     E           ++ F   Q  +  +
Sbjct: 170 VEKAKKYQLVDAEKENRDTLLQFLFSTVV-----EPQIGHDCPVVVYH-FPASQAALAQI 223

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGL 525
              DL    A +++    G E+A+G          L  F      +E       +    L
Sbjct: 224 SSEDLR--VAERFEFYYKGLELANGFHELADVREQLHRFELDNRQREKAGLPVRDIDKRL 281

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             A Q G+P   G+A G+DR++M+ +GA++++EV  F
Sbjct: 282 LGALQAGIPDCSGVALGVDRLLMIAMGAESIKEVISF 318


>gi|311695403|gb|ADP98276.1| tRNA synthetase, class II (D, K and N) [marine bacterium HP15]
          Length = 322

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-VGISKEVVENRFG---GLYRAFQCGMP 534
           A +++L  +G E+ +G             F     + +   +   G       A   G+P
Sbjct: 230 AHRFELYVDGLELCNGYWELTDPGEQRLRFEADNELRRRSGKPEMGLDEAFLAALDQGLP 289

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              G+A G+DR++ML LG +++REV  FP
Sbjct: 290 ECSGVALGLDRLLMLKLGVQDIREVLAFP 318



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 54/123 (43%), Gaps = 3/123 (2%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA--LPQ 196
              +  R + ++ +R        +E  TP+L            +P++V+ G+     L  
Sbjct: 13  QAALKSRAQQLSFVRGFFAKRGVLEVETPVLGRCGVTDVNLDGIPAQVSAGTRTGGWLQT 72

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+ + + L+A+G    FQI+  FR+ +    R   EF  L+   +  +   ++  + ++
Sbjct: 73  SPEYHMKRLLAAGCGSIFQISRVFRNGEQG-RRHNPEFSMLEWYRTGFDDVTLMAEVSDL 131

Query: 257 LRG 259
           + G
Sbjct: 132 VCG 134


>gi|147853688|emb|CAN81724.1| hypothetical protein VITISV_034603 [Vitis vinifera]
          Length = 560

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 57/188 (30%), Gaps = 35/188 (18%)

Query: 190 SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+A         Q +    A      +   P FR E   + R   EF+ ++ E++F + 
Sbjct: 293 DFFARQAFLTVSGQLQVETXACAIGSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADL 352

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RICYDDAIRR 285
            D +N  E  ++ + +   +       F+                     RI Y +AI+ 
Sbjct: 353 KDDMNCAEAYVKFLCQWLPDNCIDDMEFMAKNFDKGSIDHLRMVASMPFERISYAEAIKL 412

Query: 286 YG---TDKPDLRNPII--MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAF 340
                       N +   +   +EH   S   +F K+        V   P          
Sbjct: 413 LEEAVKKDKKFENKVEWGIDLASEHERFSTEVLFKKL------VIVHDYPKGIKAFYMRL 466

Query: 341 CDRMNEWA 348
            D M   A
Sbjct: 467 NDDMKTVA 474



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 5/119 (4%)

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
           ++ I   V   S+  +       ++E   +K+  +   +    P+   R   E +R    
Sbjct: 105 LVQISTCVHXESSLKVPPEGTKQRVEFRVEKVHHVGPVDPAKYPLPKTRLTLEFLRV--- 161

Query: 130 FLDLRRDTLHKNIVKR--TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
           F+  R        V R    +  +         F+   TPI+T S  EGA +    + +
Sbjct: 162 FVHFRSRANMIPAVARICNALAYATHTFFXNHGFLHAHTPIITTSDCEGAGEMFQVTTL 220


>gi|209965118|ref|YP_002298033.1| tRNA synthetases class II (D, K and N) subfamily, putative
           [Rhodospirillum centenum SW]
 gi|209958584|gb|ACI99220.1| tRNA synthetases class II (D, K and N) subfamily, putative
           [Rhodospirillum centenum SW]
          Length = 368

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 6/123 (4%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSP-----EGARDFLVPSRVNQGSFYALPQAPQ 199
           R RI  ++R    AE+F E  TP L  S       +     L     +      L  +P+
Sbjct: 34  RGRITRAVRAWFEAEDFAEVETPALQVSPGLEVHLQAFSTELRGPHPDDRRVLHLHTSPE 93

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+A+G  R FQ+A  FR+ +  +   P EF  L+   +     D++   E ++R 
Sbjct: 94  FAMKKLLAAGLPRLFQLAHVFRNGERSATHHP-EFSMLEWYRAGAGYTDLMRDCEALVRA 152

Query: 260 VFE 262
              
Sbjct: 153 ACR 155



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 41/113 (36%), Gaps = 7/113 (6%)

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV-VENR 521
              +   K  D     A +++L   G E+A+         V    F      K+     R
Sbjct: 255 MAALARAKPGDPR--VAERFELYACGVELANAFGELTDPAVQRARFEADMAEKQRLYGER 312

Query: 522 F---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +        A    MP   GIA G DR+VML+ GA  + +V   P++      
Sbjct: 313 YPLDEEFLDALAL-MPESAGIALGFDRLVMLVTGAARIEDVLWAPVAAPAVSP 364


>gi|239618190|ref|YP_002941512.1| tRNA synthetase class II (D K and N) [Kosmotoga olearia TBF 19.5.1]
 gi|239507021|gb|ACR80508.1| tRNA synthetase class II (D K and N) [Kosmotoga olearia TBF 19.5.1]
          Length = 314

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 79/190 (41%), Gaps = 21/190 (11%)

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           L  +T    ++ ++ ++  +R  + A+ F+E    IL+  +     +    S    G  Y
Sbjct: 16  LVDETYRDALLVQSELLKGLRETLDAKGFVEILPVILSPITDPLNHEVFDASVEYYGQNY 75

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFR---DEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           A+ ++   +KQ +     ++ + ++P  R    +   S R   EF QLDME++   +D+I
Sbjct: 76  AVTKSMILHKQ-ISVLVHEKIYSVSPNVRLETADKADSGRHLFEFVQLDMEVAGASRDEI 134

Query: 250 LNTMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYGTDKP-----D 292
           ++ ME+ +                         +  F RI   +A+ +YG         D
Sbjct: 135 MDVMEDAIIYAIRNVLSKYPWVKEKYHPTLKVPAKPFKRITVKEAVEKYGEAFESGLSKD 194

Query: 293 LRNPIIMHNV 302
           +  P+ + ++
Sbjct: 195 IDEPVWLIDI 204



 Score = 45.4 bits (106), Expect = 0.032,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 27/141 (19%)

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           ++ +  E  W++D P       +K                  +  +         +DL+ 
Sbjct: 191 LSKDIDEPVWLIDIPLLNREFYDK-----------QDPERPDVLLD---------FDLIY 230

Query: 487 N--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP-PHGGIAAGI 543
                E  SGG R H  E +++     G S       +       + G+  P  G   GI
Sbjct: 231 PEGFGEGISGGEREHEYEQIIRRMKLKGTSP----EEYTDYLELAKQGVLKPSAGCGIGI 286

Query: 544 DRIVMLLLGAKNVREVSLFPM 564
           +R    ++G ++VR+  LF  
Sbjct: 287 ERFTRYVMGLEHVRQTRLFAK 307


>gi|225434406|ref|XP_002277170.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 331

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 3/89 (3%)

Query: 190 SFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+A         Q      A      +   P FR E   + R   EF+ ++ E++F + 
Sbjct: 87  DFFARQAFFTVSGQLLVETYACAIGSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADL 146

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            D +N  E  ++ + +   +       F+
Sbjct: 147 KDDMNCAEAYVKFLCQWLPDNCIDDMEFM 175


>gi|530408|emb|CAA83705.1| Asn-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 172

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 28/137 (20%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              ++ ++P     +E K        F M Q         D  ++ A   DL+  G  E+
Sbjct: 58  APTFVTNYP-----KEIK-------AFYMKQNE-------DNKTVAAV--DLLVPGIGEL 96

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CGMPPHGGIAAGIDRIVMLL 550
             G  R    E +++    V I  + +E          +  G     G   G +R++M +
Sbjct: 97  VGGSQREDNYEKLIKRCKEVNIDIDQLEWY-----NNLRLYGYYKSAGFGLGFERLIMYI 151

Query: 551 LGAKNVREVSLFPMSQN 567
            GA N+R+V  FP +  
Sbjct: 152 TGASNIRDVIPFPRTPK 168


>gi|298291611|ref|YP_003693550.1| tRNA synthetase class II (D K and N) [Starkeya novella DSM 506]
 gi|296928122|gb|ADH88931.1| tRNA synthetase class II (D K and N) [Starkeya novella DSM 506]
          Length = 347

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 53/138 (38%), Gaps = 9/138 (6%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP------EGARDFLVPSRVNQGSFY 192
              ++ R RI   +R    A +FIE  TPIL  S          A +   P       + 
Sbjct: 18  RPFLLARQRIAGKLREFFAARDFIEVETPILQVSPGNETHLKAFATELERPDGTRTTRY- 76

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+   + L+A+G  R F +A  FR+ + R+ R   EF  L+   +    + ++  
Sbjct: 77  -LHTSPEFTAKKLLAAGEQRLFTLARVFRNGE-RTGRHHPEFTMLEWYRAHEGYEALMAD 134

Query: 253 MENVLRGVFEEFSNGNTV 270
              +L    E        
Sbjct: 135 CAELLVSTAEAVGTTAWR 152



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 7/105 (6%)

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE-NR 521
           +  +   K +D     A +++L     E+A+       ++   + F      KE +   R
Sbjct: 243 EAALARPKPSDPR--VAERFELYVCAVELANAFGELTDADEQRRRFEQWMDEKERIYGER 300

Query: 522 F---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           +        A +  MP   GIA G DR+VML  GA+ + +V   P
Sbjct: 301 YPIDEDFLAALKV-MPEASGIALGFDRLVMLASGARRIEDVIWAP 344


>gi|146340544|ref|YP_001205592.1| putative lysyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|146193350|emb|CAL77366.1| Putative lysyl-tRNA synthetase (Lysine--tRNA ligase)
           [Bradyrhizobium sp. ORS278]
          Length = 351

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 55/154 (35%), Gaps = 12/154 (7%)

Query: 114 VFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS 173
           + G+   P       R  D+R       +  R  I  ++R     + F E  T  +   S
Sbjct: 1   MTGQEPSPSPWWSPQRHADVRP-----FLQARAAITRALRGWFEEQGFTEVET-GILQLS 54

Query: 174 PEGARDFLVPSRVNQGSF-----YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
           P        P+     +        L  +P+   + L+A+G  R F+ A  FRD + R D
Sbjct: 55  PGNETHLHAPATALMAADGVQHKRYLRTSPEFACKKLLAAGERRIFEFARVFRDRE-RGD 113

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
               EF  L+   +    D I+     V+    +
Sbjct: 114 LHLPEFTMLEWYRAEAPYDAIMADTVVVIAHAAQ 147



 Score = 43.9 bits (102), Expect = 0.086,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 11/92 (11%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK-------EVVENRFGGLYRAFQC 531
           A ++++   G E+A+G      +    + F      K         ++  F     A   
Sbjct: 258 AERFEVYACGVELANGFGELTDALEQRRRFELEMAEKQRRYGERYPLDEDFLAAVAA--- 314

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            MP   G+A G DR+VML  GA  + +V   P
Sbjct: 315 -MPQASGVALGFDRLVMLAAGAVRIDQVVWTP 345


>gi|225434408|ref|XP_002277398.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 331

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 3/89 (3%)

Query: 190 SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+A         Q      A      +   P FR E   + R   EF+ ++ E++F + 
Sbjct: 87  DFFARQAFLTVSGQLLVETYACAIGSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADL 146

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            D +N  E  ++ + +   +       F+
Sbjct: 147 KDDMNCAEAYVKFLCQWLPDNCIDDMEFM 175


>gi|213428687|ref|ZP_03361437.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
          Length = 212

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 66/199 (33%), Gaps = 28/199 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
           +++      +HL I    A + +L             D  +           +  E  I 
Sbjct: 33  SLSYQQAFLRHLEIDPLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIG 92

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                +  +I  FP                     Q  +  +   D     A ++++   
Sbjct: 93  KE---KPTFIYHFP-------------------ASQASLAQISTEDHR--VAERFEVYYK 128

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGI 543
           G E+A+G      +    Q F      +       +     L  A   G+P   G+A G+
Sbjct: 129 GIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVALGV 188

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR+VML LGA+++ +V  F
Sbjct: 189 DRLVMLALGAESLADVIAF 207


>gi|77359440|ref|YP_339015.1| fold recognizing lysyl-tRNA [Pseudoalteromonas haloplanktis TAC125]
 gi|123587784|sp|Q3IFP4|SYK3_PSEHT RecName: Full=Uncharacterized protein YjeA
 gi|76874351|emb|CAI85572.1| putative fold recognizing lysyl-tRNA [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 324

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 52/137 (37%), Gaps = 25/137 (18%)

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
              + C++  FP                     Q  +  +  +D     A +++L     
Sbjct: 204 GQHKPCFVYHFP-------------------ASQAALAQICDHDSR--VAGRFELYYKNM 242

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIAAGIDR 545
           E+A+G      +    + F++    ++    +       L  A + G+ P  G+A GIDR
Sbjct: 243 ELANGFNELTNATEQAKRFNDDNEYRKQNGLKQVPMDKHLIAALEHGLAPCAGVALGIDR 302

Query: 546 IVMLLLGAKNVREVSLF 562
           +VML     N++EV  F
Sbjct: 303 LVMLATQKSNIKEVIAF 319



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
             + +R  I+ S+R    A N +E  TP L+ +S            F+ P   +    Y 
Sbjct: 13  ATLKQRAVILRSIREFFYARNVMEVETPSLSGASVTDIHLVSFNTRFVGPGHASGLELY- 71

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+   + L+A+G    FQ+   FR+E+  S   P EF  L+      ++  ++  +
Sbjct: 72  LQTSPEFAMKRLLAAGSGPIFQLCKAFRNEEAGSHHNP-EFTMLEWYRPGFDEFALMAEI 130

Query: 254 ENVLRGVFE 262
           + +++ + +
Sbjct: 131 DELMQLILD 139


>gi|229895865|ref|ZP_04511035.1| Asparaginyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229700788|gb|EEO88817.1| Asparaginyl-tRNA synthetase [Yersinia pestis Pestoides A]
          Length = 223

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 5/120 (4%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQA 507
           EK           P+         +         D++  G  EI  G  R    +V+   
Sbjct: 104 EKHFKAPVVVKNYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDAR 163

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
            + +G++K      +       + G  PH G   G +R++  + G +NVR+V  FP +  
Sbjct: 164 LAEMGLNK----EDYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRTPR 219



 Score = 38.5 bits (88), Expect = 3.6,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 58/184 (31%), Gaps = 22/184 (11%)

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTD 289
            EF+ ++ E++F   DD+    E +L+ VF+   N       F   R+  D   R     
Sbjct: 2   AEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAVLNERADDMKFFAERVDKDAVDRLQRFV 61

Query: 290 KPDLRNPIIMHNVTEHFVHSEFRVFSKI------------LSVNPGYEVWAIPAKGGGGN 337
             D    +   +  E  + S  +  + +                  ++   +        
Sbjct: 62  TSDFAQ-VDYTDAIEILLASGQKFENDVSWGIDLSSEHERYLAEKHFKAPVVVKNYPKDI 120

Query: 338 RAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGD 397
           +AF  RMNE        G       +   G    +G   +   +   +A    + +   D
Sbjct: 121 KAFYMRMNE-------DGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMGLNKED 173

Query: 398 SCFF 401
             ++
Sbjct: 174 YWWY 177


>gi|325969342|ref|YP_004245534.1| tRNA synthetase class II (D K and N) [Vulcanisaeta moutnovskia
           768-28]
 gi|323708545|gb|ADY02032.1| tRNA synthetase class II (D K and N) [Vulcanisaeta moutnovskia
           768-28]
          Length = 357

 Score = 71.3 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 70/212 (33%), Gaps = 14/212 (6%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R D        +  II+++R  + +  F E   PI+   +  G R     +    G  Y 
Sbjct: 45  REDKYKLVFKVQAEIIDALRDFLNSRGFTEVLAPIIGPVTDPGIRGAKQATVDFYGMEYK 104

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR---SDRLPGEFYQLDMEMSFVEQDDIL 250
           +  +   YKQ  MA+   + + ++P  R E      + R   EFYQLD+E+     D ++
Sbjct: 105 VMSSAILYKQ-YMAASLGKIYFLSPNIRFEPNDSVFTGRHLVEFYQLDLEVYGATYDQVI 163

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           +  E+++  V +   +                        PD + P   +   E      
Sbjct: 164 DLAEDMIIYVIKRVKDNYGKELEIR----------LNRQLPDFKKPFKRYTHKEAVELVN 213

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
                   +    +E     +          D
Sbjct: 214 ELGCKNPPNTEIRWECEKFLSAYHENPLFIID 245



 Score = 38.5 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 31/101 (30%), Gaps = 10/101 (9%)

Query: 469 LKGNDLLSIKAFQ-YDLVCN---GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
               D       + +D++     G  I+         +V+ +             N++  
Sbjct: 254 YDREDPQRPGILRDFDMLYPEGFGEAISGAEREYEPIKVIARMREG-----GEDPNKYRW 308

Query: 525 LYRAFQCGMP-PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                +   P    G   GI+R+   + G + V E   +P 
Sbjct: 309 YLEMLRESYPLKTAGFGIGIERLTRYVCGLRAVWEARPYPK 349


>gi|167856675|ref|ZP_02479363.1| putative lysyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167852197|gb|EDS23523.1| putative lysyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 323

 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 67/152 (44%), Gaps = 16/152 (10%)

Query: 421 AQELGIINCNCFEFCWIMDFPFYEWNEEE---KKIDFAHNPFTMPQGGMESLKGNDLLSI 477
           A+E G+      +   ++ F F E  E     ++    ++ F   Q  +  +   D    
Sbjct: 173 AREHGLQCDEDEQRDTLLQFLFSEVVEANIGKERPTAVYH-FPATQAALAQISTEDHR-- 229

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS-------NVGISKEVVENRFGGLYRAFQ 530
            A +++    G E+A+G      ++  ++ F         +G+  + ++ RF     A +
Sbjct: 230 VAERFEFYYKGLELANGFHELSDAKEQIRRFEQDNVLREAMGLPPQQLDRRF---LEALK 286

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            GMP   G+A G+DR++M+ + A ++ +V  F
Sbjct: 287 AGMPNCSGVALGVDRLMMIAMNADSIDQVMAF 318



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-----RDFLVPSRVNQGSFYAL 194
           ++++KR +I+  +R        +E  TP ++  S             +    +Q     L
Sbjct: 14  QHLLKRAKIMAEIRQFFTERGVLEVETPAMSEFSVTDVHLSTFSTQFLSPFSSQAKTLHL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A G    FQ+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 74  ITSPEYHMKRLLACGSGAIFQLCRVFRNEEVSKCHNP-EFTMLEWYRPHFDMYRLINEVD 132

Query: 255 NVLRGVFE 262
           ++L+ + +
Sbjct: 133 DLLQQILD 140


>gi|119469130|ref|ZP_01612114.1| putative fold recognizing lysyl-tRNA [Alteromonadales bacterium
           TW-7]
 gi|119447382|gb|EAW28650.1| putative fold recognizing lysyl-tRNA [Alteromonadales bacterium
           TW-7]
          Length = 324

 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 6/122 (4%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSP-----EGARDFLVPSRVNQGSFYALPQAPQ 199
           R  I+ ++R      + +E  TP L+A+S             +  R   G    L  +P+
Sbjct: 18  RAEILRTIREFFYVRDVMEVETPSLSAASVTDVHLASFNTSFMGPRHAGGLPLYLQTSPE 77

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + L+A+G    FQ+   FR+E+  S   P EF  L+      ++  +++ M+ +++ 
Sbjct: 78  FAMKRLLAAGSGSIFQLCKAFRNEEAGSHHNP-EFTMLEWYRPGFDEFALMDEMDELMQC 136

Query: 260 VF 261
           V 
Sbjct: 137 VL 138



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 13/126 (10%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E +  + K  F ++ F   Q  +  +  +D     A +++L     E+A+G      +  
Sbjct: 200 EPSIGQTKPCFVYH-FPASQAALAQICEHDER--VAGRFELYYKNMELANGFNELTNATE 256

Query: 504 MLQAF-------SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
             + F          G+ +  +++R   L  A + G+P   G+A GIDR+VML      +
Sbjct: 257 QAKRFDEDNQYREAHGLKQVPMDSR---LIAALEHGLPQCSGVALGIDRLVMLATNKDKI 313

Query: 557 REVSLF 562
           ++V  F
Sbjct: 314 KDVIAF 319


>gi|238910504|ref|ZP_04654341.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
          Length = 268

 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 66/199 (33%), Gaps = 28/199 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
           +++      +HL I    A + +L             D  +           +  E  I 
Sbjct: 89  SLSYQQAFQRHLEIDPLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIG 148

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                +  +I  FP                     Q  +  +   D     A ++++   
Sbjct: 149 KE---KPTFIYHFP-------------------ASQASLAQISTEDHR--VAERFEVYYK 184

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGI 543
           G E+A+G      +    Q F      +       +     L  A   G+P   G+A G+
Sbjct: 185 GIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVALGV 244

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR+VML LGA+++ +V  F
Sbjct: 245 DRLVMLALGAESLADVIAF 263



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 54/133 (40%), Gaps = 5/133 (3%)

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            V    +QG    L  +P+ + + L+A+G    FQ+   FR+E+        EF  L+  
Sbjct: 3   FVGPGHSQGMNLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWY 61

Query: 241 MSFVEQDDILNTMENVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
               +   ++N ++++L+ V + + +   +    F R      I     DK  LR     
Sbjct: 62  RPHYDMYRLMNEVDDLLQQVLDCQPAESLSYQQAFQR---HLEIDPLSADKTQLREAAAK 118

Query: 300 HNVTEHFVHSEFR 312
            +++      E R
Sbjct: 119 LDLSNIADTEEDR 131


>gi|296084903|emb|CBI28312.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 3/89 (3%)

Query: 190 SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+A         Q +    A      +   P FR E   + R   EF+ ++ E++F + 
Sbjct: 100 DFFARQAFFNVSGQLQVETYACAIGSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADL 159

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            D +N  +  ++ + +   +       F+
Sbjct: 160 KDDMNCAKAYVKFLCQWLPDNCIDDMEFM 188


>gi|118602198|ref|YP_903413.1| tRNA synthetase, class II (D, K and N) [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
 gi|118567137|gb|ABL01942.1| tRNA synthetase, class II (D, K and N) [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
          Length = 293

 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 74/204 (36%), Gaps = 17/204 (8%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR----DFLVPSRVNQGSFYALPQAP 198
           +KR R+I  +R     +  +E  TP L  +    A        V + +   +   L  +P
Sbjct: 8   IKRQRVIQKIRQFFEQQAVLEVQTPTLINTPTSDAYIDSISLSVNANIGMQNTQYLHTSP 67

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L+  G    +QI   FRD +   +    EF  L+      + + ++  M N+L+
Sbjct: 68  ELEMKKLLVQGSGDIYQICQVFRDNEYG-EHNSNEFTLLEYYRLGFDINQLMADMVNLLQ 126

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGT-DKPDLRNPIIMHNVTEHFVHSEFRVFSKI 317
            +         + +   ++ Y     +Y   D  +    ++    ++  + ++   F+ I
Sbjct: 127 TL--------GIQDKVHQLSYAQVFSQYADIDVLNTDFDVLKVIASKLGLSTD---FAWI 175

Query: 318 LSVNPGYEVWAIPAKGGGGNRAFC 341
             +     V  +  K       F 
Sbjct: 176 EELQMLLFVHLVEPKLKNIPLCFI 199



 Score = 39.7 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 10/133 (7%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEE-EKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           IA +LG+       F WI +     +    E K+      F       +S     + +  
Sbjct: 162 IASKLGLSTD----FAWIEELQMLLFVHLVEPKLKNIPLCFIYDYPKSQSAFAK-VKNQV 216

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMP 534
           A +++L  NG E+A+G       +   Q F+   I ++ +                  +P
Sbjct: 217 AHRFELYLNGIEVANGYDELQTKDEYQQVFTCETIKRKQLGKPISQIGVSFLSKLNKSLP 276

Query: 535 PHGGIAAGIDRIV 547
              G+A GI+R++
Sbjct: 277 QCSGVAIGINRLL 289


>gi|213608045|ref|ZP_03368871.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
          Length = 267

 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 66/199 (33%), Gaps = 28/199 (14%)

Query: 368 NVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGII 427
           +++      +HL I    A + +L             D  +           +  E  I 
Sbjct: 88  SLSYQQAFLRHLEIDPLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIG 147

Query: 428 NCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN 487
                +  +I  FP                     Q  +  +   D     A ++++   
Sbjct: 148 KE---KPTFIYHFP-------------------ASQASLAQISTEDHR--VAERFEVYYK 183

Query: 488 GFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGI 543
           G E+A+G      +    Q F      +       +     L  A   G+P   G+A G+
Sbjct: 184 GIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVALGV 243

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR+VML LGA+++ +V  F
Sbjct: 244 DRLVMLALGAESLADVIAF 262



 Score = 60.9 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 5/133 (3%)

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            V    +QG    L  +P+ + + L+A+G    FQ+   FR+E+        EF  L+  
Sbjct: 2   FVGPGHSQGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWY 60

Query: 241 MSFVEQDDILNTMENVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
               +   ++N ++++L+ V + + +   +    FLR      I     DK  LR     
Sbjct: 61  RPHYDMYRLMNEVDDLLQQVLDCQPAESLSYQQAFLR---HLEIDPLSADKTQLREAAAK 117

Query: 300 HNVTEHFVHSEFR 312
            +++      E R
Sbjct: 118 LDLSNIADTEEDR 130


>gi|147785807|emb|CAN62126.1| hypothetical protein VITISV_037579 [Vitis vinifera]
          Length = 545

 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 3/89 (3%)

Query: 190 SFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+A         Q +    A      +   P FR E   + R   EF+ ++ E++F + 
Sbjct: 278 DFFARQAFFNVSGQLQVETYACAIGSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADL 337

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFL 275
            D +N  +  ++ + +   +       F+
Sbjct: 338 KDDMNCAKAYVKFLCQWLPDNCIDDMEFM 366


>gi|225454926|ref|XP_002277014.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 490

 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 54/186 (29%), Gaps = 31/186 (16%)

Query: 190 SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+A         Q +    A      +   P FR E   + R   EF+ ++ E++F + 
Sbjct: 256 DFFARQAFLTVSGQLQVETHACAIGSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADL 315

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFL---------------------RICYDDAIRR 285
            D +N  E  ++ + +   +       F+                     RI Y +AI+ 
Sbjct: 316 KDDMNCAEAYVKFLCQWLPDNCIDDMEFMAKNFDKGSIDHLRMVASMPFERISYAEAIKL 375

Query: 286 YG---TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
                       N +         + SE   FS  +       V   P           D
Sbjct: 376 LEEAVKKDKKFENKVEWG----IDLASEHERFSAEVLFKKLVIVHDYPRGIKAFYMRLND 431

Query: 343 RMNEWA 348
            M   A
Sbjct: 432 DMKTVA 437



 Score = 64.7 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 57/157 (36%), Gaps = 11/157 (7%)

Query: 32  PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT 91
             G ++ L++ D      +    D+A   + + V+    + ++  +      T       
Sbjct: 21  RKGLLVSLELNDGSYPANLQVIVDAAVAPLGQLVQISTCVHVESSLKVPPEGTK------ 74

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKR--TRII 149
            ++E   +K+  +   +    P+   R   E +R    F+  R  T     V R    + 
Sbjct: 75  QRVEFRVEKVHHVGPVDPAKYPLPKTRLTLEFLRV---FVHFRSRTNMIPAVARICNALA 131

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            +     +   F+   TPI+T S  EGA +    + +
Sbjct: 132 YATHTFFLNHGFLHAHTPIITTSDCEGAGEMFQVTTL 168


>gi|77166083|ref|YP_344608.1| lysyl-tRNA synthetase-related protein [Nitrosococcus oceani ATCC
           19707]
 gi|76884397|gb|ABA59078.1| Lysyl-tRNA synthetase-related protein [Nitrosococcus oceani ATCC
           19707]
          Length = 356

 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 82/242 (33%), Gaps = 28/242 (11%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN----- 187
           R     K +  R +++  +R        +E  TPIL TA++       LV +        
Sbjct: 33  RPQADKKALEARAQLLADIRHFFARRGVLEVETPILSTAAATAPHLHSLVTTYQGPQAPK 92

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           +G    L  +P+   + L+A+G    +QIA  FR+ +    R   EF  L+      +  
Sbjct: 93  EGQQLFLQTSPEHAMKRLLAAGSGPIYQIARVFRNGESG-RRHNPEFTLLEWYRPGFDHL 151

Query: 248 DILNTMENVL--------------RGVFEEFSNGNTVSNNFLRI------CYDDAIRRYG 287
            ++  ++ +L              R VF  +   +  + +   +           +   G
Sbjct: 152 ALMEEVDILLSLLLGTSAGERLSYREVFHRYLGIDVFTASDKTLARLANVQGFHDVAASG 211

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
                +    ++ NV E  +  E   F          ++  I       +R   +R   +
Sbjct: 212 GQARQIYLDFLLANVIEPQLGQERPCFIYDYPA-SDAQLARIRPPSESCSRPLAERFEVY 270

Query: 348 AR 349
            +
Sbjct: 271 LK 272



 Score = 67.4 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 4/90 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
            A ++++   G E+A+G      +    Q F    I ++            L  A + G+
Sbjct: 263 LAERFEVYLKGMELANGYHELCDAVEQRQRFGADLIQRKRGGLSEVPMDKFLLAALEQGL 322

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P   G+A G+DR++MLLL +  + EV  FP
Sbjct: 323 PACAGVALGVDRLLMLLLNSARIEEVLAFP 352


>gi|240277935|gb|EER41442.1| lysyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 209

 Score = 71.3 bits (173), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 4/95 (4%)

Query: 477 IKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCG 532
               +++      EI +     +        F      K   ++           + + G
Sbjct: 86  GLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQASQKAQGDDEAQLIDENFCTSLEFG 145

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
           +PP GG   GIDR+VM L    +++EV  FP  + 
Sbjct: 146 LPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKE 180


>gi|47026941|gb|AAT08691.1| asparaginyl-tRNA synthetase [Hyacinthus orientalis]
          Length = 88

 Score = 70.9 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G  R     V+++     G+  E  E          + G   H G   G +R++M 
Sbjct: 11  ELIGGSQREERLGVLVERIKEAGLPLEPYE----WYLDLRRFGTVKHSGFGLGFERMIMF 66

Query: 550 LLGAKNVREVSLFPMSQNFCDL 571
             G  N+R+V  FP      DL
Sbjct: 67  ATGIDNIRDVIPFPRYPGRADL 88


>gi|262197352|ref|YP_003268561.1| tRNA synthetase class II (D K and N) [Haliangium ochraceum DSM
           14365]
 gi|262080699|gb|ACY16668.1| tRNA synthetase class II (D K and N) [Haliangium ochraceum DSM
           14365]
          Length = 416

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 5/96 (5%)

Query: 155 RMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYF 214
                +F+E  TP+L  S   G    L P    +G +  L  +P+   + L+A+G +R +
Sbjct: 112 FFAERDFLEVETPLLVGSP--GLEVHLDPVPAGRGQW--LITSPEFQMKRLLAAGLERVY 167

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            +  CFR ++  +     EF  ++   ++   DDIL
Sbjct: 168 TVCKCFRADELGAQHN-VEFTMIEWYRAWAGWDDIL 202



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 4/87 (4%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPP 535
            ++++   G E+ +       +      F+     +             L RA   G+P 
Sbjct: 325 ERFEVYVAGIELCNAFGELVDAAEQRARFAASAAERARRGRAHLATDEALLRALDEGLPA 384

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLF 562
             GIA GIDR++ML+ GA ++REV  F
Sbjct: 385 CAGIALGIDRLLMLVTGASHIREVLTF 411


>gi|126460216|ref|YP_001056494.1| asparagine synthetase A [Pyrobaculum calidifontis JCM 11548]
 gi|126249937|gb|ABO09028.1| aspartate-ammonia ligase [Pyrobaculum calidifontis JCM 11548]
          Length = 369

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 73/185 (39%), Gaps = 17/185 (9%)

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           ++   E +R+ +R+   R +        +  I+  +R  + +  F+E   P++   +  G
Sbjct: 43  KQAVEEFLRYSWRWA--RDEKYQTVFKIQAGILRGIREFLDSRGFVEVLAPVIGPVTDPG 100

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED---PRSDRLPGE 233
            R     S    G  Y +  +   YKQ  MAS   + + ++P  R E      + R   E
Sbjct: 101 IRGARQASIDFYGVEYKVMSSAILYKQ-YMASALGKIYFVSPNVRLEPVESIYTGRHLVE 159

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           FYQ+D+EM      D +   E+++  V +             R  Y   +   G + P+ 
Sbjct: 160 FYQVDIEMYKATYYDAMALAEDLVYHVAKYV-----------REEYWRELEALGRELPEF 208

Query: 294 RNPII 298
           + P  
Sbjct: 209 KRPFK 213



 Score = 40.4 bits (93), Expect = 0.89,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 49/155 (31%), Gaps = 22/155 (14%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH----NPFTMPQGGMESLKGND 473
             I  E G +N    E  W          E EK     H      +  P+G        D
Sbjct: 221 VKIVNEYGCVNSPREELRW----------ECEKLFSALHTSPVFIYDYPKGSRGFYDRED 270

Query: 474 LLSIKAFQ-YDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
                  + +D++      E  SG  R +  + +++     G        ++G   +  +
Sbjct: 271 PERPGVLRDFDMLYPEGFGEAISGAEREYEPDRLIERIKEGGEDP----AKYGWFLQMAK 326

Query: 531 CGMP-PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              P    G   G++R    + G + V E   FP 
Sbjct: 327 ELYPLQTAGFGIGVERFTRYICGLRAVWEARPFPK 361


>gi|219871220|ref|YP_002475595.1| lysyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219691424|gb|ACL32647.1| lysyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 301

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 14/121 (11%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E+     H P T  Q  +  +   D     A +++    G E+A+G      ++  ++ F
Sbjct: 183 ERPTAVYHFPAT--QAALAQISTEDHR--VAERFEFYYKGLELANGFHELSDAKEQIRRF 238

Query: 509 S-------NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
                    +G+  + ++ RF     A + GMP   G+A G+DR++M+ + A ++ +V  
Sbjct: 239 EQDNVLREAMGLPPQQLDRRF---LEALKAGMPNCSGVALGVDRLMMIAMNADSIDQVMA 295

Query: 562 F 562
           F
Sbjct: 296 F 296



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 49/119 (41%), Gaps = 6/119 (5%)

Query: 149 INSMRCRMIAENFIECSTPILTASSPEGA-----RDFLVPSRVNQGSFYALPQAPQQYKQ 203
           +  +R        +E  TP ++  S             +    +Q     L  +P+ + +
Sbjct: 1   MAEIRQFFTERGVLEVETPAMSEFSVTDVHLSTFSTQFLSPFSSQAKTLHLITSPEYHMK 60

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            L+A G    FQ+   FR+E+  S R   EF  L+      +   ++N ++++L+ + +
Sbjct: 61  RLLACGSGAIFQLCRVFRNEEV-SKRHNPEFTMLEWYRPHFDMYRLINEVDDLLQQILD 118


>gi|304311514|ref|YP_003811112.1| Predicted tRNA synthetases class II (D, K and N) [gamma
           proteobacterium HdN1]
 gi|301797247|emb|CBL45467.1| Predicted tRNA synthetases class II (D, K and N) [gamma
           proteobacterium HdN1]
          Length = 327

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 74/221 (33%), Gaps = 21/221 (9%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--GSFYALPQAPQQ 200
             R  +   +R        +E  TP+L +S+   A D  + S   Q  G    L  +P+ 
Sbjct: 20  RARAHLNQRIRDFFSERGVLEVETPLLCSST---ATDPFLTSLSLQWRGCTRYLQTSPEF 76

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
             + L+A+G    FQ+   FR ++      P EF  L+         D+++  E ++  +
Sbjct: 77  PMKRLLAAGSGPIFQLCKVFRADEFGRLHNP-EFSMLEWYRPGFSLADLMDETEALIVAL 135

Query: 261 FEEFSNGNTVSNNFLRICYDDAIRRYGTDKP----DLRNPIIMHNVT----EHFVHSEFR 312
              F     +S  F R+ Y  A        P    DL+  +I         E +    + 
Sbjct: 136 AAVFG--RPLSGPFQRVSYRKAFLDAVGVDPLTVSDLQLSVIARECVPSAPEEWDRDGWL 193

Query: 313 VFSKILSVNPG-----YEVWAIPAKGGGGNRAFCDRMNEWA 348
                  V P        VW  P       R   D   E  
Sbjct: 194 NLLMAEVVEPHLGNGPVFVWGFPPSQASLARCLHDDDGERV 234



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 4/108 (3%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +     +D     A + +    G E+A+G      ++     F      ++ +
Sbjct: 215 FPPSQASLARCLHDDDGERVAARAEFYLGGMELANGYDELTDAQEQRVRFQADLAQRQCL 274

Query: 519 ENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +         L  A Q G+PP  G+A G+DR++M LL    + +V  F
Sbjct: 275 DAASVPMPDALLDALQAGLPPSAGMALGVDRLLMWLLDKPRIADVCSF 322


>gi|148360743|ref|YP_001251950.1| lysyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|296106192|ref|YP_003617892.1| lysyl tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|148282516|gb|ABQ56604.1| lysyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|295648093|gb|ADG23940.1| lysyl tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 317

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 55/126 (43%), Gaps = 14/126 (11%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------NQGSFYALPQ 196
             R  +I  +R       ++E  TP++       AR  +    +       +G    L  
Sbjct: 16  RARAELIGKIRQFFTERQYLEVETPVM-------ARHGVTDVYLSNIKAIFRGETCYLQT 68

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+ + + L+A+G    FQ+A  FRD++      P EF  L+     ++   +++ ++ +
Sbjct: 69  SPEYHMKRLLAAGSGPIFQLARVFRDDELGRWHNP-EFTLLEWYQLHIDHHVLMDEVDLL 127

Query: 257 LRGVFE 262
           L+ + +
Sbjct: 128 LQIILK 133



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 17/142 (11%)

Query: 428 NCNCFEFCW---IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           + + + F     +++ PF    EE   +   H P    Q  +  +         A ++++
Sbjct: 181 DRDQYLFLLMSHVVE-PFL--AEESTPVAVYHFP--ASQAALAQVNE-----GVAERFEV 230

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIA 540
              G E+A+G       E   + F      ++            L +A + G+PP  G+A
Sbjct: 231 YYQGVELANGFHELTDVEAQKKRFMLDQQHRKQKGLTAMEADAYLLKALEYGLPPCSGVA 290

Query: 541 AGIDRIVMLLLGAKNVREVSLF 562
            G+DR++ L L   N+  V  F
Sbjct: 291 LGVDRLLALALKQPNIANVFSF 312


>gi|254435727|ref|ZP_05049234.1| lysyl-tRNA synthetase family protein [Nitrosococcus oceani AFC27]
 gi|207088838|gb|EDZ66110.1| lysyl-tRNA synthetase family protein [Nitrosococcus oceani AFC27]
          Length = 332

 Score = 70.9 bits (172), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 82/242 (33%), Gaps = 28/242 (11%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN----- 187
           R     K +  R +++  +R        +E  TPIL TA++       LV +        
Sbjct: 9   RPQADKKALEARAQLLADIRHFFARRGVLEVETPILSTAAATAPHLHSLVTTYQGPQAPK 68

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           +G    L  +P+   + L+A+G    +QIA  FR+ +    R   EF  L+      +  
Sbjct: 69  EGQQLFLQTSPEHAMKRLLAAGSGPIYQIARVFRNGESG-RRHNPEFTLLEWYRPGFDHL 127

Query: 248 DILNTMENVL--------------RGVFEEFSNGNTVSNNFLRI------CYDDAIRRYG 287
            ++  ++ +L              R VF  +   +  + +   +           +   G
Sbjct: 128 ALMEEVDILLSLLLGTSAGERLSYREVFHRYLGIDVFTASDKTLARLANVQGFHDVAASG 187

Query: 288 TDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
                +    ++ NV E  +  E   F          ++  I       +R   +R   +
Sbjct: 188 GQARQIYLDFLLANVIEPQLGQERPCFIYDYPA-SDAQLARIRPPSESCSRPLAERFEVY 246

Query: 348 AR 349
            +
Sbjct: 247 LK 248



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 4/90 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
            A ++++   G E+A+G      +    Q F    I ++            L  A + G+
Sbjct: 239 LAERFEVYLKGMELANGYHELCDAVEQRQRFGADLIQRKRGGLSEVPMDKFLLAALEQGL 298

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P   G+A G+DR++MLLL +  + EV  FP
Sbjct: 299 PACAGVALGVDRLLMLLLNSARIEEVLAFP 328


>gi|223954271|gb|ACN30266.1| putative asparaginyl tRNA synthetase [Epichloe festucae]
          Length = 276

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 60/187 (32%), Gaps = 22/187 (11%)

Query: 171 ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
            S  EG             +F  L Q+ Q Y +  + S     + I   FR E   + R 
Sbjct: 2   QSQVEGGATLFKFDYYGADAF--LTQSSQLYLETCLPS-MGSVYCIEKSFRAEKSLTRRH 58

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS--------------NGNTVSNNFLR 276
             EF  ++ E+ F+E   +L+ +E ++  V E                         F+R
Sbjct: 59  LSEFTHVEAELDFIEFSHLLDHVEFLICRVIELTMADPAIAGYVKTLNPEFTMPERPFMR 118

Query: 277 ICYDDAIRRYGTDKPDLRNP---IIMHNVTEHFVHSEFRVFSKI--LSVNPGYEVWAIPA 331
           + Y DAI+                   ++ E        + +K   L+  P +       
Sbjct: 119 MKYTDAIQWLIDHDIPNEEGNPHNFGDDIAEAAERRMTDIMNKPIFLTHFPAHIKAFYMK 178

Query: 332 KGGGGNR 338
           K    NR
Sbjct: 179 KDPEDNR 185



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 47/139 (33%), Gaps = 23/139 (16%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++  FP             AH      +   E  +  + +        L+    EI 
Sbjct: 161 KPIFLTHFP-------------AHIKAFYMKKDPEDNRVTESVDC------LMPGVGEIV 201

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
            G +R    + +L A    G+  E     F       + G  PHGG   G++R++  L  
Sbjct: 202 GGSMRIDDYDELLAACKREGLDPEAYCWYF----DQRKYGSSPHGGYGIGLERLLAWLCK 257

Query: 553 AKNVREVSLFPMSQNFCDL 571
              VR+  L+P     C  
Sbjct: 258 QHTVRDCCLYPRYMGRCKP 276


>gi|52840844|ref|YP_094643.1| lysyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|54296627|ref|YP_122996.1| hypothetical protein lpp0658 [Legionella pneumophila str. Paris]
 gi|52627955|gb|AAU26696.1| lysyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|53750412|emb|CAH11806.1| hypothetical protein lpp0658 [Legionella pneumophila str. Paris]
          Length = 317

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 55/126 (43%), Gaps = 14/126 (11%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------NQGSFYALPQ 196
             R  +I  +R       ++E  TP++       AR  +    +       +G    L  
Sbjct: 16  RARAELIGKIRQFFTERQYLEVETPVM-------ARHGVTDVYLSNIKAIFRGETCYLQT 68

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+ + + L+A+G    FQ+A  FRD++      P EF  L+     ++   +++ ++ +
Sbjct: 69  SPEYHMKRLLAAGSGPIFQLARVFRDDELGRWHNP-EFTLLEWYQLHIDHHVLMDEVDLL 127

Query: 257 LRGVFE 262
           L+ + +
Sbjct: 128 LQIILK 133



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 17/142 (11%)

Query: 428 NCNCFEFCW---IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           + + + F     +++ PF    EE   +   H P    Q  +  +K        A ++++
Sbjct: 181 DRDQYLFLLMSHVVE-PFL--AEESTPVAVYHFP--ASQAALAQVKE-----GLAERFEV 230

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIA 540
              G E+A+G       E   + F      ++            L +A + G+PP  G+A
Sbjct: 231 YYQGVELANGFHELTDVEAQKKRFMLDQQHRKQKGLTAMEADAYLLKALEYGLPPCSGVA 290

Query: 541 AGIDRIVMLLLGAKNVREVSLF 562
            G+DR++ L L   ++ ++  F
Sbjct: 291 LGVDRLLALALKQPSIEKILSF 312


>gi|332304893|ref|YP_004432744.1| lysyl-tRNA synthetase-related protein GenX [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172222|gb|AEE21476.1| lysyl-tRNA synthetase-related protein GenX [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 335

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 62/162 (38%), Gaps = 24/162 (14%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF-------- 191
             + +R  II  +R      N +E  TP L+ +S     DF    RV +  F        
Sbjct: 24  ATLKQRANIIADIRQFFAQRNVMEVETPQLSNASV---SDF--HMRVFETEFNDPTSPHA 78

Query: 192 --YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  +P+   + L+ +G    +QIA  FR+E+      P EF  L+          +
Sbjct: 79  RTMYLQTSPEYAMKRLLCAGSGPIYQIAKAFRNEEAGKHHNP-EFTMLEWYRPDFNHSQL 137

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           ++ ++++++ V               R+ Y  A   Y +  P
Sbjct: 138 MDELDDLMQQVV--------GCEKAQRMSYQAAFILYLSIDP 171



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 12/111 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF-------SNV 511
           F   Q  +  +   D     A +++L   G E+A+G       E   Q F        N 
Sbjct: 225 FPASQAALARICKEDER--VAERFELYFKGIELANGFHELAHVEEQRQRFNADNSLRKNN 282

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +    ++  F     A + G+P   G+A GIDR+VML L   N+ +V  F
Sbjct: 283 DLPSVAIDELF---LSALEVGLPDCAGVAVGIDRLVMLALDKPNISQVLAF 330


>gi|313829496|gb|EFS67210.1| conserved domain protein [Propionibacterium acnes HL063PA2]
          Length = 83

 Score = 70.9 bits (172), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 5/77 (6%)

Query: 491 IASGGIRNHMSEVMLQAFSNVGI----SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
           + +         +  + F+   +                  A +  MPP GG+  G+DR+
Sbjct: 1   MGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRL 60

Query: 547 VMLLLGAKNVREVSLFP 563
           VM+L  A ++RE   FP
Sbjct: 61  VMMLTNA-SIRETISFP 76


>gi|149391071|gb|ABR25553.1| asparaginyl-trna synthetase [Oryza sativa Indica Group]
          Length = 80

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 4/81 (4%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           E+  G  R    + +      + ++K    + +       + G  PH G   G +R+V  
Sbjct: 3   ELIGGSQREERLDYLEARLDELNLNK----DSYWWYLDLRRYGSVPHAGFGLGFERLVQF 58

Query: 550 LLGAKNVREVSLFPMSQNFCD 570
             G  N+R+   FP      +
Sbjct: 59  ATGMDNIRDTIPFPRVPGSAE 79


>gi|262170412|ref|ZP_06038090.1| lysyl-tRNA synthetase-related protein [Vibrio mimicus MB-451]
 gi|261891488|gb|EEY37474.1| lysyl-tRNA synthetase-related protein [Vibrio mimicus MB-451]
          Length = 318

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 63/153 (41%), Gaps = 16/153 (10%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYALPQAP 198
           R  ++  +R      + +E  TP ++ ++           +F+ P    +GS   L  +P
Sbjct: 12  RATLLRQIREFFAERDVLEVETPAMSHATVTDIHLHTFKTEFVGPGYA-KGSSLHLMTSP 70

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+A+G    +Q+   FR+E+      P EF  L+      +   +++ M+ +L+
Sbjct: 71  EFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNP-EFAMLEWYRIGFDHHALMDEMDALLQ 129

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            V          S +  R+ Y +A        P
Sbjct: 130 LVLR--------SGSAERMTYQEAFLNVLGVCP 154



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A ++++   G E+A+G          L  F      +  +
Sbjct: 208 FPASQAALAKINPADSR--VADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEM 265

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               +     L  A + G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 266 GLAEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 314


>gi|124506207|ref|XP_001351701.1| asparagine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23504629|emb|CAD51508.1| asparagine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 1128

 Score = 70.5 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 77/203 (37%), Gaps = 7/203 (3%)

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              +G    L Q+PQ +KQ+L+ S FD+ ++I  C+R+E   S R   EF  LD+E    
Sbjct: 605 YKLEGQNIVLSQSPQLFKQMLINSDFDKVYEINYCYRNEKFHSSRHLNEFMSLDIEKVIY 664

Query: 245 E-QDDILNTMENVLRGVFEEFSNGNTVSNNFL------RICYDDAIRRYGTDKPDLRNPI 297
           +   +I+  M N+L+ +    +N      N L         Y     ++  +   +    
Sbjct: 665 DNYYEIIIYMYNILKDMNTYINNNYFNELNILSSFYNNNNNYTYRASQFCDNPIVISFSE 724

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLA 357
               + +++ +++  +       N  +               +   +N   +   +  + 
Sbjct: 725 AQDILDKYYRNNKNDILLLQKKENNIHINNKNTYIYDKKYNKYIKILNNEEKQNMKKKIM 784

Query: 358 YIFWRLDESGNVAGMGPVAKHLN 380
           +   + D+  N+     + K+  
Sbjct: 785 FESSQKDKLHNIYYYNKILKYYK 807



 Score = 50.1 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 24/106 (22%)

Query: 479  AFQYDLVCNGFEIASGGIRNHMSEVMLQA--------------FSNVGISKEVVENRFGG 524
            +  YD +  G EI SG  R H   ++L                      +     + F  
Sbjct: 1020 SNSYDFIYKGMEIISGSQRIHNLPILLFKTLKENKQISLSTYLHKKDNFTILNYLDNFQK 1079

Query: 525  LY----------RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            L            +FQ    PHGG+A G++R ++ LL   NV+ V+
Sbjct: 1080 LINKKSTIYKYFNSFQYASKPHGGLALGMERYLITLLNLNNVKNVT 1125


>gi|256087094|ref|XP_002579712.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238665189|emb|CAZ35951.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 401

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 48/137 (35%), Gaps = 30/137 (21%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              +I  FP                        ++      +  IKA   DL+  G  E+
Sbjct: 289 RPVFITHFPM----------------------ELKPFYCQSVDGIKAECADLLFPGIGEL 326

Query: 492 ASGGIRNHM-SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
               +R ++ S +  +  SN   ++                G  PHGG   G +R++  +
Sbjct: 327 VGASVRENVASRLQTRMKSNRSTNQSD------WYINLRGTGSVPHGGFGLGFERLMQFV 380

Query: 551 LGAKNVREVSLFPMSQN 567
           LG  N+R+   FP + N
Sbjct: 381 LGIANIRDTVAFPRNTN 397



 Score = 47.0 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 70/199 (35%), Gaps = 35/199 (17%)

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP------- 183
           +  R       +  R  I   +R  M + +++E  TPILT++  EG              
Sbjct: 114 MRHRLPEFGAMLRMRAHIKRIVRKVMSSCDYLEVDTPILTSTDCEGTGQMFEVQAPALNE 173

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
           +R +  S   L  + Q + + L          +   F      SD       +L ++ + 
Sbjct: 174 TRESDSSSVYLTGSAQMHLESLALGLSKNDLLLIRTFLGSQSESDSH---CKRLLIDSA- 229

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYG--TDKPDLRN--PIIM 299
           +E  D+L TM                +   F+RI Y +A++      D  DL    P  +
Sbjct: 230 LELRDVLETM----------------LKQPFIRISYFEAMKYLNKEMDTVDLTTSRPRDL 273

Query: 300 HNVTEH----FVHSEFRVF 314
           +   EH    +V     VF
Sbjct: 274 NKKEEHRILDWVGGNRPVF 292


>gi|307595113|ref|YP_003901430.1| tRNA synthetase class II (D K and N) [Vulcanisaeta distributa DSM
           14429]
 gi|307550314|gb|ADN50379.1| tRNA synthetase class II (D K and N) [Vulcanisaeta distributa DSM
           14429]
          Length = 357

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 72/212 (33%), Gaps = 14/212 (6%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R D        +  II+++R  + +  F E   PI+   +  G R     +    G  Y 
Sbjct: 45  REDKYKLVFKVQAEIIDALRDFLNSRGFTEVLAPIIGPVTDPGIRGAKQATVDFYGMEYK 104

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR---SDRLPGEFYQLDMEMSFVEQDDIL 250
           +  +   YKQ  MA+   + + ++P  R E      + R   EFYQLD+E+     D ++
Sbjct: 105 VMSSAILYKQ-YMAASLGKIYFLSPNIRFEPNDSVFTGRHLVEFYQLDLEVYGATYDQVI 163

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           +  E+++  V +   +                  +     PD + P   +   E      
Sbjct: 164 DLAEDMIIYVIKRVKDNYGKELE----------TKLNRQLPDFKKPFRRYTHKEAVELVN 213

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
                   +    +E   + +          D
Sbjct: 214 ELGCKNPPNTEIRWECEKLLSAYHENPFFIID 245



 Score = 39.3 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 49/156 (31%), Gaps = 24/156 (15%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAH-NPFT---MPQGGMESLKGND 473
             +  ELG  N    E  W          E EK +   H NPF     P+G        D
Sbjct: 209 VELVNELGCKNPPNTEIRW----------ECEKLLSAYHENPFFIIDYPKGARGFYDRED 258

Query: 474 LLSIKAFQ-YDLVCN---GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
                  + +D++     G  I+         +V+ +             N++       
Sbjct: 259 PQRPGILRDFDMLYPEGFGEAISGAEREYEPIKVIARMREG-----GEDPNKYRWYLEML 313

Query: 530 QCGMP-PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +   P    G   G++R+   + G + V E   +P 
Sbjct: 314 RELYPLKTAGFGIGVERLTRYVCGLRAVWEARPYPK 349


>gi|15640024|ref|NP_219477.1| lysyl-tRNA synthetase (lysS-2) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189026263|ref|YP_001934035.1| lysyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|3323370|gb|AAC26594.1| lysyl-tRNA synthetase (lysS-2) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018838|gb|ACD71456.1| lysyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|291060401|gb|ADD73136.1| lysyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 351

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 58/157 (36%), Gaps = 14/157 (8%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTAS-SPE-----GARDFLVPSRVNQGSFYALPQA 197
            R + + ++R   +  ++IE  TP L  +  PE        ++             L  +
Sbjct: 8   FRAQCLRAVRDFFLEHHYIELDTPALARALVPERCLEVFQTEYFTSVHAKDTQKLYLVPS 67

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ + + L+A      FQI+ C+R+ +        EF  ++    + +    L+    + 
Sbjct: 68  PEVFLKPLIAQLQRSAFQISKCYRNGESMGALHRPEFTMVEYYTVYADYKTSLDVSSKLF 127

Query: 258 RGVFEEFSNGN--------TVSNNFLRICYDDAIRRY 286
           R V E+  +               F  +  ++A  RY
Sbjct: 128 RFVVEQVQSHPLADPYSCACFCAPFEYVTVEEAFLRY 164



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 3/90 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
           KG+    +   +++L   G E+ +       ++ + +       +K+        +   F
Sbjct: 255 KGDAPHWVVKERWELYVRGVELINCYTEQRDAKHVTRYCREEQTAKQGSARVVHPVPEGF 314

Query: 530 QCG---MPPHGGIAAGIDRIVMLLLGAKNV 556
                 MPP  G A G DR+V LL G  ++
Sbjct: 315 AHACARMPPCSGAALGFDRLVALLAGRHSL 344


>gi|261867508|ref|YP_003255430.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|293391385|ref|ZP_06635719.1| putative lysyl-tRNA synthetase-like protein GenX [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|261412840|gb|ACX82211.1| putative lysyl-tRNA synthetase-like protein GenX [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|290951919|gb|EFE02038.1| putative lysyl-tRNA synthetase-like protein GenX [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 323

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-----EGARDFLVPSRVNQGSFYAL 194
           KN++ R + +  +R        +E  TP+L+                +     Q     L
Sbjct: 14  KNLLARAKFMAEIRRFFTDRGLLEVETPVLSEFGVTDVHLATFSTEFISPFGEQSKKLWL 73

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    FQI   FR+E+  +   P EF  L+      +   ++N ++
Sbjct: 74  STSPEYHMKRLLAAGSGPIFQIGKVFRNEEAGNRHNP-EFTMLEWYRPHFDMYRLINEVD 132

Query: 255 NVLRGVFE 262
           ++L+ + E
Sbjct: 133 DLLQQILE 140



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
           +E  +   H P    Q  +  +   DL    A +++    G E+A+G      +   L+ 
Sbjct: 204 QESPVVVYHFP--ASQAALAQISSEDLR--VAERFEFYYKGLELANGFHELSDAREQLRR 259

Query: 508 FSNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           F      +E +    +     L  A Q G+P   G+A G+DR++M+ +GA++++EV  F
Sbjct: 260 FEQDNHQREKMGLPPQTIDTRLLSALQAGIPNCSGVALGVDRLLMIAMGAESIKEVISF 318


>gi|52425688|ref|YP_088825.1| lysyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81386826|sp|Q65S20|SYK3_MANSM RecName: Full=Uncharacterized protein YjeA
 gi|52307740|gb|AAU38240.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 323

 Score = 70.5 bits (171), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 8/126 (6%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYALPQ 196
             R +II  +R        +E  TP+L+              +F+ P   N  + + L  
Sbjct: 17  FTRAKIIREIRKFFTERGLLEVETPVLSEFGVTDVHLSTFNTEFIAPIGENSKTLW-LMT 75

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+ + + L+A+G    FQI   FR+E+  S   P EF  L+      +   ++N ++++
Sbjct: 76  SPEYHMKRLLAAGSGAIFQICRVFRNEEAGSRHNP-EFTMLEWYRPHFDMYRLINEVDDL 134

Query: 257 LRGVFE 262
           L+ + +
Sbjct: 135 LQQILD 140



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 6/108 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   D     A +++    G E+A+G      +   L  F      +E +
Sbjct: 213 FPASQAALAQISSEDHR--VAERFEFYFKGLELANGFNELTDANEQLIRFERDNRQREKM 270

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                     L  A + GMP   G+A G+DR++M  L A  + EV  F
Sbjct: 271 GLPQRAIDKRLLAALEAGMPNCAGVALGVDRLLMAALNANRIEEVMAF 318


>gi|530448|emb|CAA83775.1| Asp-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
          27343]
          Length = 51

 Score = 70.5 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 35/51 (68%)

Query: 3  RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
            RTH+CG+L + +V   V L GWV ++R  G ++F+D++D YGITQ+V  
Sbjct: 1  MKRTHTCGELTLQNVDQKVILQGWVKKIRKLGAMVFIDLKDRYGITQLVIE 51


>gi|319789471|ref|YP_004151104.1| tRNA synthetase class II (D K and N) [Thermovibrio ammonificans
           HB-1]
 gi|317113973|gb|ADU96463.1| tRNA synthetase class II (D K and N) [Thermovibrio ammonificans
           HB-1]
          Length = 304

 Score = 70.5 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 55/132 (41%), Gaps = 7/132 (5%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS-----SPEGARDFLVPSRVNQGSFY 192
           + + ++KR + + ++R    + +F+E  TP L        + E  R      R  +  +Y
Sbjct: 1   MIEILIKRAKALEAVRRFFSSRSFVEVETPNLVPYKNPDDNVENVRATFSDWRGRRFDWY 60

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+ + + L+  G +R FQ+   +RD +        EF  ++      +    +  
Sbjct: 61  -LHTSPEFFMKRLLWHGMERIFQVCKVYRDGETG-PLHSVEFTMVEWYRVGADYRAGMEE 118

Query: 253 MENVLRGVFEEF 264
             +++  V +  
Sbjct: 119 TLSLINEVAKAL 130



 Score = 50.1 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 7/90 (7%)

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ-CG 532
           +    A ++++   G EIA+G           + FS     K   E+   GL +  +   
Sbjct: 208 VEGGTARRFEVYLKGVEIANGYTELTTYSEYKRVFSK----KGGAEDY--GLLKLLEERP 261

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +PP  G+A G DR+VM+L G+  ++EV  F
Sbjct: 262 LPPCEGVALGFDRLVMVLTGSSCLKEVMPF 291


>gi|76156434|gb|AAX27645.2| SJCHGC05000 protein [Schistosoma japonicum]
          Length = 228

 Score = 70.5 bits (171), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 52/150 (34%), Gaps = 18/150 (12%)

Query: 11  DLGVS-DVGSFVRLSGWVHRVRPHGGIIFLD--IRDH--YGITQVVANPDSACFEIAKSV 65
           +L     V   V + G +HR R  G + F    ++D+    +  V         +   S+
Sbjct: 78  ELSDEVYVNQHVWVRGRLHRSRMKGKLCFFVLRLQDYRVQNVLSVGERTPKEMLDFVSSI 137

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA--------EELPLPVFGE 117
             E ++ + G V+         N  T  IE+  +K+ ++S A        E+   P   E
Sbjct: 138 SKESIVDVYGQVLKSPVLIEGCNPDT--IEIHCEKVFVVSSALSTLPLQIEDAMRPDDDE 195

Query: 118 ---REYPESIRFKYRFLDLRRDTLHKNIVK 144
                  +  R   R +DLR          
Sbjct: 196 SALSRVNQDTRLDNRCIDLRTPVNQAIYRV 225


>gi|18313428|ref|NP_560095.1| asparagine synthetase A [Pyrobaculum aerophilum str. IM2]
 gi|18160962|gb|AAL64277.1| asparaginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 348

 Score = 70.1 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 11/178 (6%)

Query: 94  IELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMR 153
           I  S  ++E L + +E    +  E         KY +     +        +  I+ ++R
Sbjct: 3   IHPSVTELEKLVIDKESYKRMLEE-------WLKYSWRWAVNEKYKLVFKVQASILRALR 55

Query: 154 CRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRY 213
             + ++ F+E  +PI+   +  G R     S    G+ Y +  +   YKQ  MA    + 
Sbjct: 56  EFLDSKGFVEVLSPIIGPVTDPGIRGAKQASIDFYGAEYKVMSSAILYKQ-YMARVLGKI 114

Query: 214 FQIAPCFRDEDPR---SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           + ++P  R E P    + R   EFYQLD+EM      + ++  E+++  V +   + +
Sbjct: 115 YFVSPNIRLEPPDSIFTGRHLVEFYQLDLEMYKATYHEAMDLAEDLITYVVKYVKDVH 172



 Score = 40.4 bits (93), Expect = 0.88,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 46/132 (34%), Gaps = 11/132 (8%)

Query: 441 PFYEWNEEEKKIDFAHN--PFT---MPQGGMESLKGNDLLSIKAFQ-YDLVCN--GFEIA 492
           P  E   E +K+  AH+  PF     P+G        D       + +D++      E  
Sbjct: 212 PREELRWECEKVMSAHHDSPFFVYDYPRGSRGFYDREDPERPGVLRDFDMLYPEGFGEAI 271

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SG  R    E +++     G      +     L  A +       G   G++R+   + G
Sbjct: 272 SGAEREFEPERLVERIREGGEDPAKYQW---FLQMAKELYPLQTAGFGIGVERLTRYICG 328

Query: 553 AKNVREVSLFPM 564
            + V E   +P 
Sbjct: 329 LRAVWEARPYPK 340


>gi|255546233|ref|XP_002514176.1| asparagine--tRNA ligase, putative [Ricinus communis]
 gi|223546632|gb|EEF48130.1| asparagine--tRNA ligase, putative [Ricinus communis]
          Length = 155

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 9/128 (7%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGG--IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           G S  G  VR+ GWV   R  G     FL++ D      +    +    +++  V +   
Sbjct: 30  GASLKGQRVRVGGWVKTGREQGKGSFAFLELNDGTCPANLQVIVEKEVADLSPLVHTGAC 89

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRF 130
           + ++G++      T        +IEL  +K+  +   +    P+   +   E +R  +  
Sbjct: 90  VSVEGVLKEPPEGTK------QKIELRVEKVIHVGPVDPAKYPIPKTKLTLEFLR-DHIH 142

Query: 131 LDLRRDTL 138
           L  R +T+
Sbjct: 143 LRPRTNTV 150


>gi|94500573|ref|ZP_01307104.1| lysyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94427363|gb|EAT12342.1| lysyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 311

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAF-SNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           A +++L  NG E+A+G       +     F       +           +A   G+P   
Sbjct: 222 AKRFELYVNGLELANGYDELVDVQEQKSRFDVEAKKREHEQRVDDEYFLQALASGLPDCS 281

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLF 562
           G+A G+DRI+ML LG  N+ +V  F
Sbjct: 282 GVAIGLDRILMLKLGLSNISDVLSF 306



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 2/113 (1%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           R      +R   +  + +E  TP+L+ ++   A +    S     +   L  +P+   + 
Sbjct: 15  RANFYRYLREFFLQRSVLEVETPMLSKAAVSDA-NLQPVSAQVMNAPAFLHTSPEYPMKR 73

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           L+A+G    +QI   FRD +   +R   EF  L+        + +++ +  ++
Sbjct: 74  LLAAGSGDIYQICKTFRDGEQG-NRHNPEFSMLEYYRLGFNLETLMDEVAQLV 125


>gi|149068948|gb|EDM18500.1| rCG64430 [Rattus norvegicus]
          Length = 211

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 22/119 (18%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSN 510
                 PF M +         D  +  A   DL+  G  E+  G +R     V+ Q  + 
Sbjct: 112 YPSELKPFYMRENED------DPQNTVA-AVDLLVPGVGELFGGSLREERYHVLEQRLAR 164

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                              + G  PHGG   G +R +  +LG  N+++V  FP   + C
Sbjct: 165 --------------YLDLRKFGSVPHGGFGMGFERYLQCILGVDNIKDVIPFPRFTHSC 209


>gi|257465041|ref|ZP_05629412.1| lysyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257450701|gb|EEV24744.1| lysyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 327

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 12/153 (7%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEE----EKKIDFAHNPFTMPQGGMESLKGND 473
              A++ G+   +      ++ F F E  E     E+     H P T  Q  +  +   D
Sbjct: 174 VEKARKHGLQCDDDENRDTLLQFLFSEIVEANIGKERPTAVYHFPST--QAALAQVSSED 231

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAF 529
                + +++    G E+A+G      ++  ++ F+   + +E +    +        A 
Sbjct: 232 HR--VSERFEFYYKGLELANGFHELDDAQEQIRRFNADNVEREKMGLPPQALDVRFLAAL 289

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           + G+P   G+A G+DR++ML LGA++++EV  F
Sbjct: 290 EAGIPNCSGVALGVDRLIMLALGAEHIKEVISF 322



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 54/124 (43%), Gaps = 6/124 (4%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGA-----RDFLVPSRVNQGSFYALPQAP 198
           KR +I+  +R        +E  TP+L+  S             +     +     L  +P
Sbjct: 22  KRAKIMKEIRQFFSDRGVLEVETPVLSEFSVTDVHLSTFSTQFLSPFEREAKPLYLMTSP 81

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+A+G    +Q+   FR+E+      P EF  L+    + +   ++N ++++L+
Sbjct: 82  EYHMKRLLAAGSGAIYQLCKVFRNEEAGKRHNP-EFTMLEWYRPYFDMYRLINEVDDLLQ 140

Query: 259 GVFE 262
            + +
Sbjct: 141 QILD 144


>gi|167947573|ref|ZP_02534647.1| lysyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 94

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQCGMP 534
           A +++L   G EIA+G      ++   + F     ++             L  A Q G+P
Sbjct: 2   AERFELYLEGMEIANGFHELSDADEQRRRFEVDNQNRRAAGLVEPPMDEYLLAALQAGLP 61

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              G+A GIDR++M + GA+ +R+V  FP
Sbjct: 62  DCAGVALGIDRLLMQVSGAEQIRQVLAFP 90


>gi|313631232|gb|EFR98695.1| lysyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 42

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/41 (46%), Positives = 29/41 (70%)

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
           A + G+PP GG+  GIDR+VMLL  A ++R++ LFP  ++ 
Sbjct: 1   ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKHR 41


>gi|33151303|ref|NP_872656.1| lysyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|38605186|sp|Q7VPM9|SYK3_HAEDU RecName: Full=Uncharacterized protein YjeA
 gi|33147523|gb|AAP95045.1| lysine--tRNA ligase [Haemophilus ducreyi 35000HP]
          Length = 327

 Score = 70.1 bits (170), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 8/119 (6%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
           +E+     H P    Q  +  +   D     A ++++   G E+A+G    + ++  ++ 
Sbjct: 208 QERPTTVYHFP--SSQAALAQISSEDHR--VAERFEIYYKGLELANGFHELNDAKEQIRR 263

Query: 508 FSNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           F      +E +    +        A + G+P   G+A G+DR++ML L A +++EV  F
Sbjct: 264 FERDNQLREQMNLPPQPLDMRFLAALKAGIPNCSGVALGVDRLIMLALNANHIQEVMAF 322



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           + ++KR++I+  +R        +E  TP L+  S         + +FL P    Q     
Sbjct: 18  QTLLKRSKIMAEIRQFFTDRGVLEVETPALSEYSVTDVHLSTFSTEFLSPF-AKQAKTLH 76

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N +
Sbjct: 77  LITSPEYHMKRLLAAGSSSIFQLCRVFRNEESGKRHNP-EFTMLEWYRPHFDMYRLINEV 135

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 136 DDLLQQILD 144


>gi|85058288|ref|YP_453990.1| lysyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123520181|sp|Q2NW90|SYK3_SODGM RecName: Full=Uncharacterized protein YjeA
 gi|84778808|dbj|BAE73585.1| lysyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 325

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N    K  F ++ F   Q  +  +   D     A +++    G E+A+G      +  
Sbjct: 201 EPNIGHDKPAFVYH-FPASQAALAEISTEDHR--VADRFEAYFKGIELANGFCELTDARE 257

Query: 504 MLQAFSNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             Q F      +  +    +     L  A   GMP   G+A G+DR+VML L A  + +V
Sbjct: 258 QRQRFEQDNRKRVAMKLSEQPIDENLLAALAQGMPECSGVALGVDRLVMLALKADRLSDV 317

Query: 560 SLF 562
             F
Sbjct: 318 IAF 320



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 56/138 (40%), Gaps = 26/138 (18%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASS---------------PEGARDFLVPS 184
            N++KR  I+  +R        +E  TP ++ ++               P  A       
Sbjct: 14  ANLLKRAAIVGQIRRFFSDRGLLEVETPAMSQATVTDIHLVPFQTCFIGPGAAG------ 67

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
               G    L  +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      
Sbjct: 68  ----GMPLYLMTSPEYHMKRLLAAGSGPLFQLCRSFRNEEAGRYHNP-EFTMLEWYRPHY 122

Query: 245 EQDDILNTMENVLRGVFE 262
           +   ++N ++++L+ + +
Sbjct: 123 DMYRLMNEVDDLLQQILD 140


>gi|260770862|ref|ZP_05879791.1| lysyl-tRNA synthetase-related protein [Vibrio furnissii CIP 102972]
 gi|260614099|gb|EEX39289.1| lysyl-tRNA synthetase-related protein [Vibrio furnissii CIP 102972]
          Length = 318

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 54/120 (45%), Gaps = 8/120 (6%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYALPQAP 198
           R  +++ +R      + +E  TP ++ ++            F+ P     G    L  +P
Sbjct: 12  RAALLSRIRQFFAERDVLEVDTPAMSHATVTDVHLHTFQTQFVGPGYA-TGRHLHLMTSP 70

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+A+G    +Q+A  FR+E+      P EF  L+      +  D+++ M+ +L+
Sbjct: 71  EFHMKRLLAAGSGSIYQMAKAFRNEENGRYHNP-EFTMLEWYRVGFDHHDLMDEMDALLQ 129



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 66/212 (31%), Gaps = 28/212 (13%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L  +  +   S  +         L +   E     L             +P         
Sbjct: 127 LLQMTLQTGASERLTYQQAFLTVLGVCPLEGSMAELKQAAASLGLSDIAEPETDRDTLLQ 186

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
               +  E  I         ++ DFP                     Q  +  +  +D  
Sbjct: 187 LLFSMGVEGNI---GQHVPAFVYDFP-------------------ASQAALAKINPHDAR 224

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQC 531
              A ++++   G E+A+G          L  F      +  +    +     L  A + 
Sbjct: 225 --VADRFEVYFKGIELANGFHELDNPREQLARFEADNAKRIDMGLAPQPIDYHLIAALEA 282

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 283 GLPACAGVALGIDRLIMLALGEDHIDKVTAFP 314


>gi|319775232|ref|YP_004137720.1| putative lysyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|319897670|ref|YP_004135867.1| lysyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317433176|emb|CBY81550.1| putative lysyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317449823|emb|CBY86031.1| putative lysyl-tRNA synthetase [Haemophilus influenzae F3047]
          Length = 323

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 18/156 (11%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNE----EEKKIDFAHNPFTMPQGGMESLKGND 473
             +A++   +  +  +   ++ F F E  E    +E+ I   H P T  Q  +  +   D
Sbjct: 170 IEVARKHNFMAEDNEDRDTLLQFLFSEVVEPQIGKERPIAVYHFPST--QAALAQVSPED 227

Query: 474 LLSIKAFQYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
                A +++    G E+A+G         + H  E+  Q      +    ++ RF    
Sbjct: 228 QR--VAERFEFYYKGLELANGFHELADAQEQRHRFELDNQQRQKCELPTREIDERF---L 282

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            A + GMP   G+A GIDR++M+ L  + + +V  F
Sbjct: 283 AALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 318



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 16/133 (12%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTP----------ILTASSPEGARDFLVPSRVNQG 189
           KN++KR +II  +R        +E  TP           L+  S E    F   S+    
Sbjct: 14  KNLLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFGEQSKTL-- 71

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  +P+ + + L+A+G    FQI+  FR+E+  +   P EF  L+          +
Sbjct: 72  ---WLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNCHNP-EFTMLEWYRPHFHMHRL 127

Query: 250 LNTMENVLRGVFE 262
           +N ++++L+ + +
Sbjct: 128 INEVDDLLQQILD 140


>gi|301115242|ref|XP_002905350.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262110139|gb|EEY68191.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 231

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 12/106 (11%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           K   A  PF                   +  YD++  G E+       H  +++++    
Sbjct: 117 KFPLAVRPFYTMPD--------PTDKRWSNSYDMMIRGKEMVLCAQHVHDPKLLMERMDE 168

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
           +G+     +        + +    PHGG   G++R+VML LG  N+
Sbjct: 169 LGVP----QESMRNYIYSLRLDSLPHGGGGIGLERVVMLYLGLGNI 210



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)

Query: 164 CSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM-ASGFDRYFQIAPCFRD 222
             TP L   +     ++      +Q +  A  Q+PQ YK +    +  +R F+I P FR 
Sbjct: 7   IHTPKLVGGASGSGTNYFTLKYFDQDATLA--QSPQTYKHMACDVAILERVFEIGPGFRA 64

Query: 223 EDPRSDRLPGEFYQLDMEMSF 243
           E   + R   E   LD+EM+ 
Sbjct: 65  ETSNTHRHMCELVGLDLEMTI 85


>gi|315178905|gb|ADT85819.1| lysyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 324

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 54/120 (45%), Gaps = 8/120 (6%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGA------RDFLVPSRVNQGSFYALPQAP 198
           R  +++ +R      + +E  TP ++ ++            F+ P     G    L  +P
Sbjct: 18  RAALLSRIRQFFAERDVLEVDTPAMSHATVTDVHLHTFQTQFVGPGYA-TGRHLHLMTSP 76

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+A+G    +Q+A  FR+E+      P EF  L+      +  D+++ M+ +L+
Sbjct: 77  EFHMKRLLAAGSGSIYQMAKAFRNEENGRYHNP-EFTMLEWYRVGFDHHDLMDEMDALLQ 135



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 66/212 (31%), Gaps = 28/212 (13%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAAD 415
           L  +  +   S  +         L +   E     L             +P         
Sbjct: 133 LLQMTLQTGASERLTYQQAFLTVLGVCPLEGSMAELKQAATSLGLSDIAEPETDRDTLLQ 192

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLL 475
               +  E  I         ++ DFP                     Q  +  +  +D  
Sbjct: 193 LLFSMGVEGNI---GQHVPAFVYDFP-------------------ASQAALAKINPHDAR 230

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQC 531
              A ++++   G E+A+G          L  F      +  +    +     L  A + 
Sbjct: 231 --VADRFEVYFKGIELANGFHELDNPREQLARFEADNAKRIDMGLAPQPIDYHLIAALEA 288

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           G+P   G+A GIDR++ML LG  ++ +V+ FP
Sbjct: 289 GLPACAGVALGIDRLIMLALGEDHIDKVTAFP 320


>gi|270158829|ref|ZP_06187486.1| lysyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289166378|ref|YP_003456516.1| lysyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269990854|gb|EEZ97108.1| lysyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288859551|emb|CBJ13516.1| lysyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 313

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 7/145 (4%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL--VPSRVNQGSFYALPQAPQQ 200
            +R  ++  +R       + E  TPI+      G  D        + +G  Y L  +P+ 
Sbjct: 12  RQRAELLKKIRYFFTERGYWEVETPIMARY---GTTDVYLSNIEALFRGETYYLQTSPEY 68

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
           + + L+A+G    FQIA  FRD++      P EF  L+     ++   ++  M+  L+ +
Sbjct: 69  HMKRLLAAGSGPIFQIARVFRDDELGRWHNP-EFTLLEWYQLGIDHHTLIGEMDLFLQMI 127

Query: 261 FE-EFSNGNTVSNNFLRICYDDAIR 284
            E       T  + FL  C+ D   
Sbjct: 128 LESRPMLKKTYQHAFLEACHIDPFC 152



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 4/88 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMP 534
           A ++++   G E+A+G      +    + F      +             L  A + G+P
Sbjct: 221 AERFEVYYQGVELANGFHELTDAAAQKKRFVLDQHLRNQKGLRAAEADQYLLNALEHGLP 280

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              G+A G+DR++ L L    + +V  F
Sbjct: 281 SCSGVALGVDRLLALALKKSEIAQVISF 308


>gi|145640943|ref|ZP_01796525.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145274457|gb|EDK14321.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 323

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 21/168 (12%)

Query: 413 AADARNHI---AQELGIINCNCFEFCWIMDFPFYEWNE----EEKKIDFAHNPFTMPQGG 465
            +  R+ +   A++   +  +  +   ++ F F E  E    +E+ I   H P T  Q  
Sbjct: 162 LSAERSELIEAARKHNFMAEDDEDRDTLLQFLFSEVVEPQIGKERPIAVYHFPST--QAA 219

Query: 466 MESLKGNDLLSIKAFQYDLVCNGFEIASGG-------IRNHMSEVMLQAFSNVGISKEVV 518
           +  +   D     A +++    G E+A+G         + H  E+  Q      +    +
Sbjct: 220 LAQVSPEDQR--VAERFEFYYKGLELANGFHELADAQEQRHRFELDNQQRQKCELPTREI 277

Query: 519 ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + RF     A + GMP   G+A GIDR++M+ L  + + +V  F M  
Sbjct: 278 DERF---LAALEAGMPDASGVALGIDRLMMIALDCEKINDVISFAMDN 322



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 16/133 (12%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTP----------ILTASSPEGARDFLVPSRVNQG 189
           KN++KR +II  +R        +E  TP           L+  S E    F   S+    
Sbjct: 14  KNLLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFGEQSKTL-- 71

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  +P+ + + L+A+G    FQI+  FR+E+  +   P EF  L+          +
Sbjct: 72  ---WLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNP-EFTMLEWYRPHFHMHRL 127

Query: 250 LNTMENVLRGVFE 262
           +N ++++L+ + +
Sbjct: 128 INEVDDLLQQILD 140


>gi|329122843|ref|ZP_08251415.1| lysine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327472107|gb|EGF17545.1| lysine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 333

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG-------IRNHMS 501
           E+ I   H P T  Q  +  +   D     A +++    G E+A+G         + H  
Sbjct: 215 ERPIAVYHFPST--QAALAQVSPEDQR--VAERFEFYYKGLELANGFHELADAQEQRHRF 270

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E+  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  
Sbjct: 271 ELDNQQRQKCELPTREIDERF---LAALEAGMPDASGVALGIDRLMMIALDCEKINDVIS 327

Query: 562 FPMSQ 566
           F M  
Sbjct: 328 FAMDN 332



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 16/133 (12%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTP----------ILTASSPEGARDFLVPSRVNQG 189
           KN++KR +II  +R        +E  TP           L+  S E    F   S+    
Sbjct: 24  KNLLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFGEQSKTL-- 81

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  +P+ + + L+A+G    FQI+  FR+E+  +   P EF  L+          +
Sbjct: 82  ---WLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNP-EFTMLEWYRPHFHMHRL 137

Query: 250 LNTMENVLRGVFE 262
           +N ++++L+ + +
Sbjct: 138 INEVDDLLQQILD 150


>gi|148826519|ref|YP_001291272.1| lysyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229845887|ref|ZP_04465999.1| lysyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|166229784|sp|A5UDN8|SYK3_HAEIE RecName: Full=Uncharacterized protein YjeA
 gi|148716679|gb|ABQ98889.1| lysyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229810891|gb|EEP46608.1| lysyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|301169555|emb|CBW29156.1| predicted lysyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 323

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG-------IRNHMS 501
           E+ I   H P T  Q  +  +   D     A +++    G E+A+G         + H  
Sbjct: 205 ERPIAVYHFPST--QAALAQVSPEDQR--VAERFEFYYKGLELANGFHELADAQEQRHRF 260

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E+  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  
Sbjct: 261 ELDNQQRQKCELPTREIDERF---LAALEAGMPDASGVALGIDRLMMIALDCEKINDVIS 317

Query: 562 FPMSQ 566
           F M  
Sbjct: 318 FAMDN 322



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 16/133 (12%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTP----------ILTASSPEGARDFLVPSRVNQG 189
           KN++KR +II  +R        +E  TP           L+  S E    F   S+    
Sbjct: 14  KNLLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFGEQSKTL-- 71

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  +P+ + + L+A+G    FQI+  FR+E+  +   P EF  L+          +
Sbjct: 72  ---WLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNP-EFTMLEWYRPHFHMHRL 127

Query: 250 LNTMENVLRGVFE 262
           +N ++++L+ + +
Sbjct: 128 INEVDDLLQQILD 140


>gi|260914411|ref|ZP_05920880.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260631512|gb|EEX49694.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 323

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 55/134 (41%), Gaps = 6/134 (4%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-----RDFLVPSRVNQ 188
           R      N++ R +I+  +R        +E  TP+L+                V     Q
Sbjct: 8   RPSASINNLLTRAKIMAEIRRFFTDRGLLEVETPVLSEFGVTDVHLSTFSTQFVSPFGEQ 67

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
                L  +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   
Sbjct: 68  SKTLWLSTSPEYHMKRLLAAGSGPIFQLCHVFRNEESGHRHNP-EFTMLEWYRPHFDMYR 126

Query: 249 ILNTMENVLRGVFE 262
           ++N ++++L+ + E
Sbjct: 127 LINEVDDLLQQILE 140



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 14/121 (11%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN-------HMS 501
           E  +   H P T  Q  +  +   D     A +++    G E+A+G           H  
Sbjct: 205 ENPVAVYHFPAT--QAALAQISSEDHR--VAERFEFYYKGLELANGFHELTDANEQYHRF 260

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E   +    +G+ +  ++ R   L  A Q G+P   G+A G+DR++M+ LGA+N++EV  
Sbjct: 261 EQDNRLREKMGLPQRDIDKR---LLGALQAGVPNCSGVALGVDRLLMIALGAQNIQEVIS 317

Query: 562 F 562
           F
Sbjct: 318 F 318


>gi|288941474|ref|YP_003443714.1| tRNA synthetase class II (D K and N) [Allochromatium vinosum DSM
           180]
 gi|288896846|gb|ADC62682.1| tRNA synthetase class II (D K and N) [Allochromatium vinosum DSM
           180]
          Length = 330

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 52/132 (39%), Gaps = 6/132 (4%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS---PEGAR--DFLVPSRV 186
           D R +     I  R  +   +R        +E  TPIL+ ++   P  A     +  +  
Sbjct: 8   DWRPNADLTAIRARAELYARIRAFFSESGVLEVETPILSRAAVTDPALASLSTQVDIAGF 67

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                  L  +P+   + L+A+G    +QI   FRDE+      P EF  L+      + 
Sbjct: 68  GPRRPLYLQTSPEFAMKRLLAAGIGPIYQICKVFRDEERGRRHHP-EFSLLEWYRPGWDY 126

Query: 247 DDILNTMENVLR 258
             +++ +  ++R
Sbjct: 127 GRLMDEVGALVR 138



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQCGMP 534
           A +++L  +G E+A+G             F      +             L  A + GMP
Sbjct: 238 AERFELYIDGIELANGFGELVDVREQRARFQADLAFRREQGRPEPPIDEPLLDALEHGMP 297

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              G+A G+DR++M+  G +++  V  F
Sbjct: 298 ECAGVALGLDRLLMIATGVEHIDAVLTF 325


>gi|261415457|ref|YP_003249140.1| tRNA synthetase class II (D K and N) [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261371913|gb|ACX74658.1| tRNA synthetase class II (D K and N) [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302325424|gb|ADL24625.1| tRNA synthetase, class II (D, K and N) [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 323

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 10/108 (9%)

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM-------LQAFSNVGISK 515
           Q  +     ++     A +++L  N  E+ +G                 L+    +    
Sbjct: 215 QAALAQTYVDNEGYTWARRFELFVNQVELCNGYTELTDPVEQRRRFYADLEIRKGMNKPL 274

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             ++ RF     A + GMP   G+A G+DR+ ML LG + + +V LFP
Sbjct: 275 PPIDERF---LAALESGMPACSGVALGLDRLFMLALGKEEIADVILFP 319



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 70/178 (39%), Gaps = 14/178 (7%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
            +  VKR  ++  +R   +  N +E  TP+L+A    G  D  +     +     +  +P
Sbjct: 15  RETWVKRQALMARVRDFFVRRNALEVETPVLSAY---GGTDPQLDYFEIEDPKRFMMTSP 71

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           + + + L+A+ F   FQI   FR ++        EF  ++     + QD +++ +E+++ 
Sbjct: 72  EFHMKRLLAAKFGDIFQITKSFRKDEFGG-HHNNEFSMVEWYRVGMIQDKLMDEVEDLVS 130

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSK 316
            +            N  R  + DA + Y    P       + +  +     E  V  K
Sbjct: 131 EII-------GTKLNARRTRWIDAFKNYAGVNP---FCEKLTDFADACRAREIPVPEK 178


>gi|309807573|ref|ZP_07701525.1| hypothetical protein HMPREF9211_1367 [Lactobacillus iners LactinV
           01V1-a]
 gi|308169179|gb|EFO71245.1| hypothetical protein HMPREF9211_1367 [Lactobacillus iners LactinV
           01V1-a]
          Length = 73

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 29/47 (61%)

Query: 548 MLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVEN 594
           MLL    N+R+V  FP + +  + +M SP+ V+ +QL +LG+ ++  
Sbjct: 1   MLLAEKYNIRDVIAFPKNASASEPMMHSPAPVADKQLADLGINVMSE 47


>gi|152979437|ref|YP_001345066.1| lysyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704334|sp|A6VQ84|SYK3_ACTSZ RecName: Full=Uncharacterized protein YjeA
 gi|150841160|gb|ABR75131.1| lysyl-tRNA synthetase-related protein GenX [Actinobacillus
           succinogenes 130Z]
          Length = 323

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 73/187 (39%), Gaps = 15/187 (8%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-----RDFLVPSRVNQGSFY 192
             + +  R +IIN++R        +E  TPIL+                V  +  +    
Sbjct: 12  NVETLFARAKIINNIRRFFTDRGVLEVETPILSEFGVTDVHLSTFSTEFVAPQAERSKTL 71

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+ + + L+A+G    FQ+   FR+E+  S   P EF  L+      +   ++N 
Sbjct: 72  WLNTSPEYHMKRLLAAGTGAIFQLCHVFRNEEAGSRHNP-EFTMLEWYRPHFDMYRLINE 130

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY-GTDKPDLRNPIIMHNVTEHFVHSEF 311
           ++++L    ++  +     +    + Y  A + + G D      PI++    ++    + 
Sbjct: 131 VDDLL----QQILDCEPAES----MSYQFAFQEFVGVDPLSAERPILVELARKYNFMCDL 182

Query: 312 RVFSKIL 318
                 L
Sbjct: 183 DEDRDTL 189



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 8/119 (6%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA 507
           +E+ +   H P T  Q  +  +   D     A +++    G E+A+G          L  
Sbjct: 204 QERPVAVYHFPAT--QAALAQISSEDHR--VAERFEFYYKGLELANGFHELTDHREQLHR 259

Query: 508 FSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           F    + +             L  A Q G+P   G+A G+DR+VM+ L  K + EV  F
Sbjct: 260 FEQDNVQRAKLALPQREIDRRLLGALQAGVPNTSGVALGVDRLVMIALDKKRIEEVMAF 318


>gi|145632195|ref|ZP_01787930.1| lysyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144987102|gb|EDJ93632.1| lysyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 323

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 14/125 (11%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG-------IRNHMS 501
           E+ I   H P T  Q  +  +   D     A +++    G E+A+G         + H  
Sbjct: 205 ERPIAVYHFPST--QAALAQVSPEDQR--VAERFEFYYKGLELANGFHELADAQEQRHRF 260

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E+  Q      +  + ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  
Sbjct: 261 ELDNQQRQKCELPTQEIDERF---LAALEEGMPDTSGVALGIDRLMMIALDCEKINDVIS 317

Query: 562 FPMSQ 566
           F M  
Sbjct: 318 FAMDN 322



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           KN++KR +II  +R        +E  TP+L+            + +FL P   NQ     
Sbjct: 14  KNLLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFD-NQSKTLW 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI+  FR+E+   +R   EF  L+          ++N +
Sbjct: 73  LSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAG-NRHNPEFTMLEWYRPHFHMHRLINEV 131

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 132 DDLLQQILD 140


>gi|296446349|ref|ZP_06888294.1| tRNA synthetase class II (D K and N) [Methylosinus trichosporium
           OB3b]
 gi|296256122|gb|EFH03204.1| tRNA synthetase class II (D K and N) [Methylosinus trichosporium
           OB3b]
          Length = 374

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 9/113 (7%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSP------EGARDFLVPSRVNQGSFYALPQAP 198
           R +I  ++R     E F E  T  L  S          A D +        S   L  +P
Sbjct: 47  RAKIAAALRQFFAREGFCEVETAALQLSPGNETHISAFATDLI--DSAGAASRLYLHTSP 104

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
           +   + L+A+G +R F  +  FR+ +  +   P EF  L+   +    + ++ 
Sbjct: 105 EFSCKKLLAAGEERIFTFSRVFRNRERSALHHP-EFTMLEWYRAGAPPERVME 156



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 7/115 (6%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           + + +  +   K  D     A +++L   G E+A+G           + F      ++ +
Sbjct: 258 YPLSEAALARPKAQDPR--FAERFELFACGVELANGFGELTDPIEQRRRFEEQMEERQRI 315

Query: 519 E-NRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
              R+        A    MPP  G+A G DR+VML  GA+ + +V   P+++   
Sbjct: 316 YGERYPIDADFLAALAQ-MPPASGVALGFDRLVMLATGAERIEQVLWTPVAEAGT 369


>gi|223933850|ref|ZP_03625816.1| asparaginyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897468|gb|EEF63863.1| asparaginyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 101

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G +R    + ++     +G+ K   E          + G  PHGG   GI+R+V  
Sbjct: 24  EIIGGSMREDNYDALVAKMDELGMDKSEYE----FYLDLRKYGSVPHGGFGIGIERMVTF 79

Query: 550 LLGAKNVREVSLFPMS 565
           + G K++RE   FP  
Sbjct: 80  VAGTKHIREAIPFPRM 95


>gi|289807098|ref|ZP_06537727.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 49

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/47 (42%), Positives = 29/47 (61%)

Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
            F  +GI+++    +FG L  A + G PPH G+A G+DR+ MLL G 
Sbjct: 3   VFGILGINEQEQREKFGFLLDALKYGTPPHVGLAFGLDRLTMLLTGT 49


>gi|182680127|ref|YP_001834273.1| lysine--tRNA ligase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182636010|gb|ACB96784.1| Lysine--tRNA ligase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 361

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 9/123 (7%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQG 189
            LRR  L      R R+I + R    A++FIE  T IL  S         F    R   G
Sbjct: 24  HLRRPKLLA----RARMIEATRTFFKAQDFIEVDTAILQVSPGNETHIGAFATAWRPLGG 79

Query: 190 S--FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           +     L  +P+   + L+A+G +R F     FR+++      P EF  L+   +    +
Sbjct: 80  NSAPLYLHTSPEFAAKKLLAAGEERIFTFTHAFRNDERDRLHHP-EFMMLEWYRAEAPFE 138

Query: 248 DIL 250
            ++
Sbjct: 139 VLM 141



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 78/218 (35%), Gaps = 22/218 (10%)

Query: 356 LAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGDPLKFCSFAA 414
           L  +  +  E+  ++  G VA          +        G D   F+ G P  F +FAA
Sbjct: 147 LLALTAQAAEAKILSYRGRVADPFTEPEQLTVCEAFQRYAGIDLEAFLPGGPETFEAFAA 206

Query: 415 DARNHIAQELGII--NCNCFEFCW---IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
             R     ELG+     + +   +   + D    E    + +  F  + +   +  +  L
Sbjct: 207 KTR-----ELGLRVAPDDDWSDLFSKILSDR--IEPKLGQGRATFLTD-YPACEAALARL 258

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GL 525
           + +   S  A +++L   G E+A+G           + F      +  +           
Sbjct: 259 RAD---SRFAERFELYACGVELANGFGELTDPVEQERRFEAAMAERLRIYGEAYPIDPDF 315

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A    MP   GIA G DR+ ML  G+ ++ EV   P
Sbjct: 316 LAALAQ-MPEASGIAFGFDRLAMLATGSDDIAEVLWTP 352


>gi|145634751|ref|ZP_01790459.1| lysyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|229844704|ref|ZP_04464843.1| lysyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|145267917|gb|EDK07913.1| lysyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|229812418|gb|EEP48108.1| lysyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 323

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG-------IRNHMS 501
           E+ I   H P T  Q  +  +   D     A +++    G E+A+G         + H  
Sbjct: 205 ERPIAVYHFPST--QAALAQVSPEDQR--VAERFEFYYKGLELANGFHELADAQEQRHRF 260

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E+  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  
Sbjct: 261 ELDNQQRQKCELPTREIDERF---LAALEEGMPDTSGVALGIDRLMMIALDCEKINDVIS 317

Query: 562 FPMSQ 566
           F M  
Sbjct: 318 FAMDN 322



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           KN++KR +II  +R        +E  TP+L+            + +FL P   NQ     
Sbjct: 14  KNLLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFD-NQSKTLW 72

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI+  FR+E+   +R   EF  L+          ++N +
Sbjct: 73  LSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAG-NRHNPEFTMLEWYRPHFHMHRLINEV 131

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 132 DDLLQQILD 140


>gi|69250951|ref|ZP_00605185.1| OB-fold nucleic acid binding [Enterococcus faecium DO]
 gi|68193900|gb|EAN08481.1| OB-fold nucleic acid binding [Enterococcus faecium DO]
          Length = 156

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 16/119 (13%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANP 54
           RTH+  +L            +++G    ++G +   R  G   F  ++D  G  Q+    
Sbjct: 40  RTHNSEELHELFDPRTKEELAEMGLTASVAGRMMTRRGKGKAGFAHLQDREGQIQIYVRK 99

Query: 55  DSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLP 113
           D    E  +  +   +    G     + + +     TG++ + A +  ILS A      
Sbjct: 100 DQVGDEAYEVFKHADL----GDFFGVTGQIM--KTDTGEVSIKASERTILSKALRPLPD 152


>gi|116334977|ref|YP_802472.1| aspartyl-tRNA synthetase [Candidatus Carsonella ruddii PV]
 gi|116235258|dbj|BAF35106.1| aspartyl-tRNA synthetase [Candidatus Carsonella ruddii PV]
          Length = 425

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 1/97 (1%)

Query: 146 TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLL 205
           ++II  +R      N++E   PI+   +  G++ FL+  +  +  F +L Q+PQ+ KQ  
Sbjct: 89  SKIIYFIRLFFSINNYLELDIPIIEKYTSSGSKQFLIIDKNKKKYFLSLTQSPQKIKQYY 148

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           M +  ++YFQIA CFRDED RS R   EF Q+D+E S
Sbjct: 149 MFNAINKYFQIAKCFRDEDSRSSR-IKEFQQIDIENS 184



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 14/105 (13%)

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           H+ FT  +   ++   +     K+  YD+  NG EI  G IRN    +  + F N     
Sbjct: 319 HHQFTAFKNNFKNFYNS-----KSLAYDVFLNGIEIGGGSIRNINFLIQNKIFLNSKK-- 371

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
              +++F   Y+     +P H GIA G++RI+ LL+  KN+++  
Sbjct: 372 ---KSKFINFYKR---ALPHHCGIAFGLERIISLLIK-KNIKKTI 409


>gi|260579928|ref|ZP_05847758.1| lysyl-tRNA synthetase analog [Haemophilus influenzae RdAW]
 gi|260093212|gb|EEW77145.1| lysyl-tRNA synthetase analog [Haemophilus influenzae RdAW]
          Length = 333

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 14/121 (11%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG-------IRNHMS 501
           E+ I   H P T  Q  +  +   D     A +++    G E+A+G         + H  
Sbjct: 215 ERPIAVYHFPST--QAALAQVSPEDQR--VAERFEFYYKGLELANGFHELADAQEQRHRF 270

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E+  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  
Sbjct: 271 ELDNQQRQKCELPTREIDERF---LAALEAGMPDASGVALGIDRLMMIALDCEKINDVIS 327

Query: 562 F 562
           F
Sbjct: 328 F 328



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 16/133 (12%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTP----------ILTASSPEGARDFLVPSRVNQG 189
           KN++KR +II  +R        +E  TP           L+  S E    F   S+    
Sbjct: 24  KNLLKRAKIIAKIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFGEQSKTL-- 81

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  +P+ + + L+A+G    FQI+  FR+E+  +   P EF  L+          +
Sbjct: 82  ---WLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNP-EFTMLEWYRPHFHMHRL 137

Query: 250 LNTMENVLRGVFE 262
           +N ++++L+ + +
Sbjct: 138 INEVDDLLQQILD 150


>gi|270619647|ref|ZP_06221826.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270317821|gb|EFA29180.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 82

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           + + +E   + F     +KE  ++           A + G+PP  G   GIDR+ ML   
Sbjct: 7   KLNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYAN 66

Query: 553 AKNVREVSLFPMSQN 567
           A ++R+V LFP  + 
Sbjct: 67  APSIRDVILFPAMRQ 81


>gi|8928398|sp|Q9Z614|SYK3_BUCAP RecName: Full=Putative uncharacterized protein YjeA
 gi|4378708|gb|AAD19636.1| lysyl-tRNA synthetase homolog [Buchnera aphidicola]
          Length = 324

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 70/231 (30%), Gaps = 43/231 (18%)

Query: 341 CDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCF 400
            ++M E      Q  L       +++  ++      K L I         L         
Sbjct: 123 MEKMIEEIDFFFQKIL-----NFNKADKISYQEVFMKFLKIDPLSTSLSEL--------- 168

Query: 401 FIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCWIMDF-----PFYEWNEEEKKIDFA 455
           F         +       ++  +L  +  N F    I  F     P + +          
Sbjct: 169 FQCYKKFNLKNL-----IYLENDLNQLIENIFT-LQIQPFLGKEKPLFVY---------- 212

Query: 456 HNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK 515
           H P         + K +      + ++++   G E+ +G           + F      +
Sbjct: 213 HFPSEQACLASINKKDS----RVSERFEIFFKGIELGNGFHELTDYFEQRKRFIKDNRKR 268

Query: 516 EVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             +    +        A   G+P   G+A G+DR++M+ L   ++ +V  F
Sbjct: 269 CDMNLPEQKIDDYFLDAIHHGLPTCSGVAIGLDRLIMIALNKNSIDQVMSF 319



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 56/128 (43%), Gaps = 7/128 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN------QGSFYA 193
           K+++KR++II  +R   + +N +E  TPIL+ S           +         +     
Sbjct: 12  KDLMKRSKIIADIRSFFLKKNIMEVETPILSQSGVTDVNLMPFITNYFSFNDNIKKKNLW 71

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+++G    +QI   FR+++      P EF  L+        + ++  +
Sbjct: 72  LITSPEYHMKRLLSAGSGSIYQICRSFRNQEFGQYHNP-EFTMLEWYQLSCSMEKMIEEI 130

Query: 254 ENVLRGVF 261
           +   + + 
Sbjct: 131 DFFFQKIL 138


>gi|260581653|ref|ZP_05849450.1| lysyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260095246|gb|EEW79137.1| lysyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|309973672|gb|ADO96873.1| Putative lysyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 333

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 14/121 (11%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG-------IRNHMS 501
           E+ I   H P T  Q  +  +   D     A +++    G E+A+G         + H  
Sbjct: 215 ERPIAVYHFPST--QAALAQVSPEDQR--VAERFEFYYKGLELANGFHELADAQEQRHRF 270

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E+  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  
Sbjct: 271 ELDNQQRQKCELPTREIDERF---LAALEAGMPDASGVALGIDRLMMIALDCEKINDVIS 327

Query: 562 F 562
           F
Sbjct: 328 F 328



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 8/129 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSRVNQGSFYA 193
           KN++KR +II  +R        +E  TP+L+            + +FL P   NQ     
Sbjct: 24  KNLLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFD-NQSKTLW 82

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + L+A+G    FQI+  FR+E+  +   P EF  L+          ++N +
Sbjct: 83  LSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNP-EFTMLEWYRPHFHMHRLINEV 141

Query: 254 ENVLRGVFE 262
           +++L+ + +
Sbjct: 142 DDLLQQILD 150


>gi|68057630|gb|AAX87883.1| putative lysyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|309751502|gb|ADO81486.1| Putative lysyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 333

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 14/121 (11%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG-------IRNHMS 501
           E+ I   H P T  Q  +  +   D     A +++    G E+A+G         + H  
Sbjct: 215 ERPIAVYHFPST--QAALAQVSPEDQR--VAERFEFYYKGLELANGFHELADAQEQRHRF 270

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E+  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  
Sbjct: 271 ELDNQQRQKCELPTREIDERF---LAALEAGMPDASGVALGIDRLMMIALDCEKINDVIS 327

Query: 562 F 562
           F
Sbjct: 328 F 328



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 16/133 (12%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTP----------ILTASSPEGARDFLVPSRVNQG 189
           KN++KR +II  +R        +E  TP           L+  S E    F   S+    
Sbjct: 24  KNLLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFGEQSKTL-- 81

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  +P+ + + L+A+G    FQI+  FR+E+  +   P EF  L+          +
Sbjct: 82  ---WLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNP-EFTMLEWYRPHFHMHRL 137

Query: 250 LNTMENVLRGVFE 262
           +N ++++L+ + +
Sbjct: 138 INEVDDLLQQILD 150


>gi|145628264|ref|ZP_01784065.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145630585|ref|ZP_01786365.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145636603|ref|ZP_01792270.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145638361|ref|ZP_01793971.1| lysyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|148828021|ref|YP_001292774.1| lysyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|161761274|ref|YP_248543.2| lysyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|166229785|sp|A5UHY5|SYK3_HAEIG RecName: Full=Uncharacterized protein YjeA
 gi|144980039|gb|EDJ89698.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144983975|gb|EDJ91417.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145270129|gb|EDK10065.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145272690|gb|EDK12597.1| lysyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|148719263|gb|ABR00391.1| lysyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 323

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 14/121 (11%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG-------IRNHMS 501
           E+ I   H P T  Q  +  +   D     A +++    G E+A+G         + H  
Sbjct: 205 ERPIAVYHFPST--QAALAQVSPEDQR--VAERFEFYYKGLELANGFHELADAQEQRHRF 260

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E+  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  
Sbjct: 261 ELDNQQRQKCELPTREIDERF---LAALEAGMPDASGVALGIDRLMMIALDCEKINDVIS 317

Query: 562 F 562
           F
Sbjct: 318 F 318



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 16/133 (12%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTP----------ILTASSPEGARDFLVPSRVNQG 189
           KN++KR +II  +R        +E  TP           L+  S E    F   S+    
Sbjct: 14  KNLLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFGEQSKTL-- 71

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  +P+ + + L+A+G    FQI+  FR+E+  +   P EF  L+          +
Sbjct: 72  ---WLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNP-EFTMLEWYRPHFHMHRL 127

Query: 250 LNTMENVLRGVFE 262
           +N ++++L+ + +
Sbjct: 128 INEVDDLLQQILD 140


>gi|54293590|ref|YP_126005.1| hypothetical protein lpl0642 [Legionella pneumophila str. Lens]
 gi|53753422|emb|CAH14875.1| hypothetical protein lpl0642 [Legionella pneumophila str. Lens]
          Length = 317

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 54/126 (42%), Gaps = 14/126 (11%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------NQGSFYALPQ 196
             R  +I  +R       ++E  TP++       AR  +    +       +G    L  
Sbjct: 16  RARAELIGKIRQFFTERQYLEVETPVM-------ARHGVTDVYLSNIKAIFRGETCYLQT 68

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+ + + L+A+G    FQ+A  FRD++      P EF  L+     +    +++ ++ +
Sbjct: 69  SPEYHMKRLLAAGSGPIFQLARVFRDDELGRWHNP-EFTLLEWYQLNINHHVLMDEVDLL 127

Query: 257 LRGVFE 262
           L+ + +
Sbjct: 128 LQIILK 133



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 17/142 (11%)

Query: 428 NCNCFEFCW---IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           + + + F     +++ PF    EE   +   H P    Q  +  ++        A ++++
Sbjct: 181 DRDQYLFLLMSHVVE-PFL--AEESTPVAVYHFP--ASQAALAQIQE-----GLAERFEV 230

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIA 540
              G E+A+G       E   + F      ++            L  A + G+PP  G+A
Sbjct: 231 YYQGVELANGFHELTDVEAQKKRFMLDQQHRKQKGLTAMEADAYLLEALEHGLPPCSGVA 290

Query: 541 AGIDRIVMLLLGAKNVREVSLF 562
            G+DR++ L L   ++ ++  F
Sbjct: 291 LGVDRLLALALKQPSIEKILSF 312


>gi|297154360|gb|ADI04072.1| asparagine synthetase A [Streptomyces bingchenggensis BCW-1]
          Length = 339

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 84/225 (37%), Gaps = 13/225 (5%)

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL---TASSPEGARDFLVPS 184
                L   T    ++ ++ ++   R  +  E F+E   P++   T     GA+   +  
Sbjct: 19  QPHEHLTSATTRNMLLIQSALLQGAREYLCDEGFVELLPPVVGPVTDPGCRGAKQVDIDY 78

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED---PRSDRLPGEFYQLDMEM 241
               G  Y L  +   YKQ  +     + F IAPC R E      + R   EF+Q+D+E 
Sbjct: 79  Y---GRRYKLMTSVIFYKQAAL-LAHPKIFYIAPCVRLEPFTTSSTLRHLTEFHQIDVEA 134

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
           +   ++++L   + V+RG  +          + L               P +R+  ++  
Sbjct: 135 ADTSREEMLEICQGVVRGALQRVIKQLPYVLDELGRDPGAFTDLLQQSFPSIRHMDVVET 194

Query: 302 VTE--HFVHSEFRV-FSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
           + +  H  + +  + +     ++  +           G+R F DR
Sbjct: 195 LHKLGHEQNPDGEIDWEGEALISRQHTRPFFITDYPKGSRGFPDR 239



 Score = 47.4 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 7/98 (7%)

Query: 470 KGNDLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYR 527
           + +  L  +   +DLV      E+ SG  R      +++     G +      ++    +
Sbjct: 239 RESRTLPGRLRNFDLVAPEGYGELCSGSEREGDYTRVIERMRETGENP----AKYEWYLK 294

Query: 528 AFQCG-MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            F+ G +P   G   G  R+     G  +V + S FP 
Sbjct: 295 TFKEGGIPQSAGFGLGAQRLTRYAAGLHSVWQASAFPK 332


>gi|325928154|ref|ZP_08189363.1| lysyl-tRNA synthetase (class II) [Xanthomonas perforans 91-118]
 gi|325541450|gb|EGD12983.1| lysyl-tRNA synthetase (class II) [Xanthomonas perforans 91-118]
          Length = 320

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 65/186 (34%), Gaps = 17/186 (9%)

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFL---VPSRV 186
           LDL        +  R R+  ++R        +E  TP+L+ +   E   +         V
Sbjct: 6   LDL------AALQLRARLNAAIRDFFAERGVLEVETPVLSEAGNTEPNIESFSTRFTGHV 59

Query: 187 NQGSFYA-LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           + G+    L  +P+   + L+A+G    +++   FR+ +      P EF  L+       
Sbjct: 60  DAGAPLRWLRTSPEYPLKRLLAAGLGDCYELGRVFRNGEAGGRHNP-EFSMLEWYRVGWN 118

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
              +      ++R           V     R  +  A+   G D   L +PI M     H
Sbjct: 119 DRSLAQETIELVRRALALVGRQARVQVLTYRALFVQAL---GIDP--LCDPIEMLRAALH 173

Query: 306 FVHSEF 311
            V  + 
Sbjct: 174 DVAIDP 179



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 46/113 (40%), Gaps = 13/113 (11%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG---- 512
           + +   Q  +  ++ +D     A +++L    FE+A+G    + ++     F        
Sbjct: 209 HDWPASQCALARIRHDDPP--VAERFELYLGSFEVANGYHELNDAQEQRARFVRDNAVRA 266

Query: 513 ---ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              + +  ++ R   +        P   G+A G+DR++M L G   + +V  F
Sbjct: 267 ARGLPQLPLDERLLAVLSQL----PDCAGVAVGVDRLLMALRGTTQIADVLAF 315


>gi|1573850|gb|AAC22494.1| lysyl-tRNA synthetase analog (genX) [Haemophilus influenzae Rd
           KW20]
          Length = 333

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 14/121 (11%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG-------IRNHMS 501
           E+ I   H P T  Q  +  +   D     A +++    G E+A+G         + H  
Sbjct: 215 ERPIAVYHFPST--QAALAQVSPEDQR--VAERFEFYYKGLELANGFHELADAQEQRHRF 270

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E+  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  
Sbjct: 271 ELDNQQRQKCELPTREIDERF---LAALEAGMPDASGVALGIDRLMMIALDCEKINDVIS 327

Query: 562 F 562
           F
Sbjct: 328 F 328



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 16/133 (12%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTP----------ILTASSPEGARDFLVPSRVNQG 189
           KN +KR +II  +R        +E  TP           L+  S E    F   S+    
Sbjct: 24  KNHLKRAKIIAKIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFGEQSKTL-- 81

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  +P+ + + L+A+G    FQI+  FR+E+  +   P EF  L+          +
Sbjct: 82  ---WLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNP-EFTMLEWYRPHFHMHRL 137

Query: 250 LNTMENVLRGVFE 262
           +N ++++L+ + +
Sbjct: 138 INEVDDLLQQILD 150


>gi|161350024|ref|NP_438996.2| lysyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|1174524|sp|P43826|YJEA_HAEIN RecName: Full=Uncharacterized protein YjeA
          Length = 323

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 14/121 (11%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG-------IRNHMS 501
           E+ I   H P T  Q  +  +   D     A +++    G E+A+G         + H  
Sbjct: 205 ERPIAVYHFPST--QAALAQVSPEDQR--VAERFEFYYKGLELANGFHELADAQEQRHRF 260

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E+  Q      +    ++ RF     A + GMP   G+A GIDR++M+ L  + + +V  
Sbjct: 261 ELDNQQRQKCELPTREIDERF---LAALEAGMPDASGVALGIDRLMMIALDCEKINDVIS 317

Query: 562 F 562
           F
Sbjct: 318 F 318



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 16/133 (12%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTP----------ILTASSPEGARDFLVPSRVNQG 189
           KN +KR +II  +R        +E  TP           L+  S E    F   S+    
Sbjct: 14  KNHLKRAKIIAKIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLAPFGEQSKTL-- 71

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  +P+ + + L+A+G    FQI+  FR+E+  +   P EF  L+          +
Sbjct: 72  ---WLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNP-EFTMLEWYRPHFHMHRL 127

Query: 250 LNTMENVLRGVFE 262
           +N ++++L+ + +
Sbjct: 128 INEVDDLLQQILD 140


>gi|322513263|ref|ZP_08066387.1| lysine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322120970|gb|EFX92817.1| lysine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 331

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 58/128 (45%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-----RDFLVPSRVNQGSFYAL 194
           +N++KR++I+  +R        +E  TP L+  S             +    ++     L
Sbjct: 22  QNLIKRSQIMAEIRQFFKDRGVLEVETPALSEFSVTDVHLSTFSTQFLSPFASKAKTLHL 81

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 82  MTSPEYHMKRLLAAGSGSIFQLCRVFRNEEVGKRHNP-EFTMLEWYRPHFDMYRLINEVD 140

Query: 255 NVLRGVFE 262
           ++L+ + +
Sbjct: 141 DLLQQILD 148



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 63/152 (41%), Gaps = 10/152 (6%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEE---KKIDFAHNPFTMPQGGMESLKGNDL 474
              A++ G    +      ++ F F E  E     ++    ++ F   Q  +  +   D 
Sbjct: 178 VEKARKHGFPCEDDENRDTLLQFLFSEIVEANIGKERPTAVYH-FPSSQAALAQISSEDH 236

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQ 530
               A ++++   G E+A+G      ++  ++ F    + +  +    +        A +
Sbjct: 237 R--VAERFEVYYKGLELANGFDELSDAKEQMRRFEQDNVQRAQMGLPAQQLDTRFLAALK 294

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            G+P   G+A G+DR++M+ + A+ + EV  F
Sbjct: 295 AGIPNCSGVALGVDRLMMIAMNAEKIDEVMAF 326


>gi|217976643|ref|YP_002360790.1| Lysine--tRNA ligase [Methylocella silvestris BL2]
 gi|217502019|gb|ACK49428.1| Lysine--tRNA ligase [Methylocella silvestris BL2]
          Length = 351

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 10/128 (7%)

Query: 119 EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA- 177
           + P       R+ D RR  L      RT++  + R    A++F+E  T  L  S    A 
Sbjct: 3   DAPSPWWRPDRYAD-RRPFLKA----RTKMAAAARSFFGAQHFVEVDTAALQISPGNEAH 57

Query: 178 -RDFLV--PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
              F     S   + S   L  +P+   + L+A+G +R F     FR+ +      P EF
Sbjct: 58  ISAFATQIISPSAETSPLYLHSSPEFAMKKLLAAGEERIFSFGHAFRNRERDKLHHP-EF 116

Query: 235 YQLDMEMS 242
             L+   +
Sbjct: 117 TLLEWYRA 124



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 38/114 (33%), Gaps = 12/114 (10%)

Query: 461 MPQGGMESLKGN-DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA----FSNVGISK 515
           M     E+   N       A +++L   G E+A+G           +      +      
Sbjct: 237 MDYPASEAALANLQEDQRLAERFELYACGVELANGFGELTDPVEQRRRLVAEMAERQRIY 296

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS------LFP 563
                       A    MPP  G+A G DR+VML   A+ + +V        FP
Sbjct: 297 GESYPLDEDFLAALAL-MPPSSGVALGFDRLVMLATAAERIEQVIWTPVAEAFP 349


>gi|171185377|ref|YP_001794296.1| asparagine synthetase A [Thermoproteus neutrophilus V24Sta]
 gi|170934589|gb|ACB39850.1| tRNA synthetase class II (D K and N) [Thermoproteus neutrophilus
           V24Sta]
          Length = 353

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 6/151 (3%)

Query: 117 EREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG 176
           ++   E +R+ +R+     D        +  I+ ++R  +    F+E   PI+   +  G
Sbjct: 26  KKTVEEWLRYSWRWAQ--TDKYKLVFKVQAAIVKAIREYLDGRGFVEVLPPIVGPVTDPG 83

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR---SDRLPGE 233
            R     S    G  Y +  +   YKQ  MA+   + + ++P  R E P    + R   E
Sbjct: 84  IRGAKQASIDFYGHEYKVMSSAILYKQ-YMAASLGKIYFVSPNLRLEPPDSLYTGRHLVE 142

Query: 234 FYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           F+Q+D+EM   +    +   E ++  V +  
Sbjct: 143 FFQVDIEMYGADYGQAMEVAEGLVTHVVKRV 173


>gi|39935580|ref|NP_947856.1| putative lysyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|39649433|emb|CAE27955.1| putative lysyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 351

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 54/147 (36%), Gaps = 12/147 (8%)

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           P     + R+LD         +  R  +  ++R    A  F E  T IL  S P      
Sbjct: 7   PSPWWNRDRYLD-----RQPFLRARGGVTRAVRAWFEAAGFTEVETAILQIS-PGNETHL 60

Query: 181 LVPSRVNQGSF-----YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
             P     G         L  +P+   + L+A+G  R F++A  FRD + R      EF 
Sbjct: 61  HAPRTELLGPDGERRIRYLRTSPEFACKKLLAAGETRVFELARVFRDRE-RGRVHLPEFT 119

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFE 262
            L+   +      +++    ++R   E
Sbjct: 120 MLEWYRAEAPYQQVIDDCVALVRVAAE 146



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 5/108 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +  P+  +   K +D     A +++L   G E+A+G      +    + F      KE  
Sbjct: 240 YPAPEAALARTKPDDPR--VAERFELYACGVELANGFGELTNAAEQRERFMAAMDEKERR 297

Query: 519 ENRFGGLYRAFQCG---MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 L  AF      MP   G+A G DR+VML  GA  + +V   P
Sbjct: 298 YGERYPLDEAFLAAVGEMPEASGVALGFDRLVMLAAGATTIDQVVWTP 345


>gi|71898269|ref|ZP_00680443.1| Lysine--tRNA ligase [Xylella fastidiosa Ann-1]
 gi|71732008|gb|EAO34065.1| Lysine--tRNA ligase [Xylella fastidiosa Ann-1]
          Length = 316

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 6/128 (4%)

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYA-- 193
           TL   +  R R+   +R        +E  TP+L+A+   E                 A  
Sbjct: 2   TLIDTLRLRARLNTMIRRFFADRGVLEVETPLLSAAGNTEPNIHSFTTCFTGHCDAGAAQ 61

Query: 194 --LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  +P+   + L+A+G    +++   FR+ +      P EF  L+      +   +  
Sbjct: 62  RWLRTSPEYPLKRLLAAGIGDCYELGRVFRNGEAGGRHNP-EFTMLEWYRVGWDHHRLAE 120

Query: 252 TMENVLRG 259
               ++R 
Sbjct: 121 ETTALVRE 128



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 37/91 (40%), Gaps = 11/91 (12%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVML-------QAFSNVGISKEVVENRFGGLYRAFQC 531
           A +++L     EIA+G    + +           Q  +  G+ +  ++     +      
Sbjct: 225 AERFELYLGVHEIANGYHELNDATEQRRRFEHDNQVRAARGLPQMPLDEPLLNVLSRL-- 282

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             P   G+A G+DR++M +    ++ +V  F
Sbjct: 283 --PDCAGVAVGVDRLLMAMSATASIADVLAF 311


>gi|119872269|ref|YP_930276.1| asparagine synthetase A [Pyrobaculum islandicum DSM 4184]
 gi|119673677|gb|ABL87933.1| aspartate-ammonia ligase [Pyrobaculum islandicum DSM 4184]
          Length = 353

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 4/145 (2%)

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
               +Y +   + +        +  I+ ++R  +    F+E   PI+   +  G R    
Sbjct: 30  EEWLRYSWRWAQSEKYKLVFRVQAAIVKAIREYLDGRGFVEVLPPIVGPVTDPGIRGAKQ 89

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR---SDRLPGEFYQLDM 239
            S    G  Y +  +   YKQ  MA+   + + ++P  R E P    + R   EF+Q+D+
Sbjct: 90  ASIDFYGHEYKVMSSAILYKQ-YMAASLGKIYFVSPNLRLEPPDSIYTGRHLVEFFQVDI 148

Query: 240 EMSFVEQDDILNTMENVLRGVFEEF 264
           EM   +    +   E ++  V +  
Sbjct: 149 EMYGADYGQAMELAEGLVAYVVKRV 173


>gi|87306491|ref|ZP_01088638.1| lysyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87290670|gb|EAQ82557.1| lysyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 331

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 6/112 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +   Q  +  +  +D     A +++L   G E+A+G      +E++ Q       ++   
Sbjct: 221 YPASQAALAQVSTDDPP--IAERFELYVQGVELANGYHELLDAELLRQRNQTNNQARGED 278

Query: 519 ENR----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                     L  A + G+P   G A G+DR++M+  GA+++ EV  FP+ +
Sbjct: 279 GKYRLPEASRLLEAMEFGLPACSGTALGMDRLLMVKTGARSLAEVLSFPIDR 330



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 8/105 (7%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTA-------SSPEGARDFLVPSRVNQGSFYALP 195
             R+ ++  +R   ++  F+E  TP+L+          P     F  P R  +G    L 
Sbjct: 21  HARSELLQQVRAFFLSREFLEVETPLLSHDSVIDRHLDPLSVTLFPDPRRPEEGKKLWLQ 80

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            +P+   + L+A+G    FQI   FR  +   +R   EF  L+  
Sbjct: 81  TSPEFGMKRLLAAGATSIFQIGKAFRGAEMG-ERHNVEFTMLEWY 124


>gi|227547110|ref|ZP_03977159.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|227212411|gb|EEI80301.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 55813]
          Length = 41

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/35 (51%), Positives = 26/35 (74%)

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            + GM P GG+  G+DR+VMLL G+ ++R+V LFP
Sbjct: 1   LEYGMAPTGGLGIGVDRLVMLLTGSSSIRDVLLFP 35


>gi|71275189|ref|ZP_00651476.1| Lysine--tRNA ligase [Xylella fastidiosa Dixon]
 gi|71899827|ref|ZP_00681977.1| Lysine--tRNA ligase [Xylella fastidiosa Ann-1]
 gi|170731180|ref|YP_001776613.1| lysine--tRNA ligase [Xylella fastidiosa M12]
 gi|71163998|gb|EAO13713.1| Lysine--tRNA ligase [Xylella fastidiosa Dixon]
 gi|71730418|gb|EAO32499.1| Lysine--tRNA ligase [Xylella fastidiosa Ann-1]
 gi|167965973|gb|ACA12983.1| Lysine--tRNA ligase [Xylella fastidiosa M12]
          Length = 316

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 6/128 (4%)

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYA-- 193
           TL   +  R R+   +R        +E  TP+L+A+   E                 A  
Sbjct: 2   TLIDTLRLRARLNTMIRRFFADRGVLEVETPLLSAAGNTEPNIHSFTTCFTGHCDAGAAQ 61

Query: 194 --LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  +P+   + L+A+G    +++   FR+ +      P EF  L+      +   +  
Sbjct: 62  RWLRTSPEYPLKRLLAAGIGDCYELGRVFRNGEAGGRHNP-EFTMLEWYRVGWDHHRLAE 120

Query: 252 TMENVLRG 259
               ++R 
Sbjct: 121 ETTALVRE 128



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 13/111 (11%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML-------QAFSNV 511
           +   Q  +  ++ +D     A +++L     EIA+G    + +           Q  +  
Sbjct: 207 WPATQCALARIRSDDPP--VAERFELYLGVHEIANGYHELNDATEQRRRFEHDNQVRAAR 264

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+ +  ++     +        P   G+A G+DR++M +    ++ +V  F
Sbjct: 265 GLPQMPLDEPLLNVLSRL----PDCAGVAVGVDRLLMAMSATASIADVLAF 311


>gi|213646512|ref|ZP_03376565.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
          Length = 96

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMP 534
           A ++++   G E+A+G      +    Q F      +       +     L  A   G+P
Sbjct: 4   AERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLP 63

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              G+A G+DR+VML LGA+++ +V  F
Sbjct: 64  DCSGVALGVDRLVMLALGAESLADVIAF 91


>gi|182682557|ref|YP_001830717.1| tRNA synthetase class II (D K and N) [Xylella fastidiosa M23]
 gi|182632667|gb|ACB93443.1| tRNA synthetase class II (D K and N) [Xylella fastidiosa M23]
 gi|307578836|gb|ADN62805.1| lysyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 316

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 6/128 (4%)

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYA-- 193
           TL   +  R R+   +R        +E  TP+L+A+   E                 A  
Sbjct: 2   TLIDTLRLRARLNTMIRRFFADRGVLEVETPLLSAAGNTEPNIHSFTTCFTGHCDAGAAQ 61

Query: 194 --LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  +P+   + L+A+G    +++   FR+ +      P EF  L+      +   +  
Sbjct: 62  RWLRTSPEYPMKRLLAAGIGDCYELGRVFRNGEAGGRHNP-EFTMLEWYRVGWDHHRLAE 120

Query: 252 TMENVLRG 259
               ++R 
Sbjct: 121 ETTALVRE 128



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 13/111 (11%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML-------QAFSNV 511
           +   Q  +  ++ +D     A +++L     EIA+G    + +           Q  +  
Sbjct: 207 WPATQCALARIRSDDPP--VAERFELYLGVHEIANGYHELNDATEQRRRFEHDNQVRAAR 264

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+ +  ++     +        P   G+A G+DR++M +    ++ +V  F
Sbjct: 265 GLPQMPLDEPLLNVLSRL----PDCAGVAVGVDRLLMAMSATASIADVLAF 311


>gi|32034933|ref|ZP_00135024.1| COG2269: Truncated, possibly inactive, lysyl-tRNA synthetase (class
           II) [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|126208994|ref|YP_001054219.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|126097786|gb|ABN74614.1| putative lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 327

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 58/128 (45%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-----RDFLVPSRVNQGSFYAL 194
           +N++KR++I+  +R        +E  TP L+  S             +    ++     L
Sbjct: 18  QNLIKRSKIMAEIRQFFKDRGVLEVETPALSEFSVTDVHLSTFSTQFLSPFSSEAKTLHL 77

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 78  MTSPEYHMKRLLAAGSGAIFQLCRVFRNEEAGKRHNP-EFTMLEWYRPHFDMYRLINEVD 136

Query: 255 NVLRGVFE 262
           ++L+ + +
Sbjct: 137 DLLQQILD 144



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 63/152 (41%), Gaps = 10/152 (6%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEE---KKIDFAHNPFTMPQGGMESLKGNDL 474
              A++ G    +      ++ F F E  E     ++    ++ F   Q  +  +   D 
Sbjct: 174 VEKARKHGFPCEDDENRDTLLQFLFSEIVEANIGKERPTAVYH-FPSSQAALAQISSEDN 232

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQ 530
               A ++++   G E+A+G      ++  ++ F    + +  +    +        A +
Sbjct: 233 R--VAERFEVYYQGLELANGFHELSDAKEQMRRFEQDNVQRAQMGLPAQQLDSRFLAALK 290

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            G+P   G+A G+DR++M+ + A+ + EV  F
Sbjct: 291 AGIPNCSGVALGVDRLMMIAMNAEKIDEVMAF 322


>gi|307609403|emb|CBW98892.1| hypothetical protein LPW_06791 [Legionella pneumophila 130b]
          Length = 317

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 54/126 (42%), Gaps = 14/126 (11%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV------NQGSFYALPQ 196
             R  +I  +R       ++E  TP++       AR  +    +       +G    L  
Sbjct: 16  RARAELIGKIRQFFTERQYLEVETPVM-------ARHGVTDVYLSNIKAIFRGETCYLQT 68

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+ + + L+A+G    FQ+A  FRD++      P EF  L+     +    +++ ++ +
Sbjct: 69  SPEYHMKRLLAAGSGPIFQLARVFRDDELGRWHNP-EFTLLEWYQLDINHHVLMDEVDLL 127

Query: 257 LRGVFE 262
           L+ + +
Sbjct: 128 LQIILK 133



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 17/142 (11%)

Query: 428 NCNCFEFCW---IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
           + + + F     +++ PF    EE   +   H P    Q  +  ++        A ++++
Sbjct: 181 DRDQYLFLLMSHVVE-PFL--AEESTPVAVYHFP--ASQAALAQVQE-----GLAERFEV 230

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIA 540
              G E+A+G       E   + F      ++            L  A + G+PP  G+A
Sbjct: 231 YYQGVELANGFHELTDVEAQKKRFMLDQQHRKQKGLTAMEADSYLLEALEHGLPPCSGVA 290

Query: 541 AGIDRIVMLLLGAKNVREVSLF 562
            G+DR++ L L   ++ ++  F
Sbjct: 291 LGVDRLLALALKQPSIEKILSF 312


>gi|145615197|ref|XP_360057.2| hypothetical protein MGG_05432 [Magnaporthe oryzae 70-15]
 gi|145022083|gb|EDK06103.1| hypothetical protein MGG_05432 [Magnaporthe oryzae 70-15]
          Length = 267

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 73/248 (29%), Gaps = 44/248 (17%)

Query: 9   CGDLGVSD----VG-SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
            G L  +D     G   V + G V+RV    G++F  +R    + Q +   + A    A 
Sbjct: 58  IGQLRKTDGQSQDGVQRVHVQGRVYRVAKQSGLMFARLRRGLDLIQRLYAGNLAKTYDAL 117

Query: 64  SVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
           ++  E  + + G +    A            EL       ++ A                
Sbjct: 118 TLARETSMEVFGELREVPAGLR----APLDRELHGNYFRTIAKAPGGDETFATRVPDDGD 173

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
                        TL   +  R                 + S P L  +  EG       
Sbjct: 174 F-----------PTLLNELSIR-----------------KVSPPALVQTHVEGGATLFSL 205

Query: 184 SRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               + SF  L Q+ Q Y + ++ S       +   FR E   + R   E+  +     +
Sbjct: 206 GYYGETSF--LTQSSQLYLETVLVS-LGDVCCVEKSFRAEKLLTRRHLSEYTLMV----Y 258

Query: 244 VEQDDILN 251
            +   +L 
Sbjct: 259 TDWKLVLE 266


>gi|32473374|ref|NP_866368.1| lysine--tRNA ligase genX [Rhodopirellula baltica SH 1]
 gi|32398054|emb|CAD78149.1| lysine--tRNA ligase genX [Rhodopirellula baltica SH 1]
          Length = 394

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 70/204 (34%), Gaps = 28/204 (13%)

Query: 367 GNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGI 426
             V      AKHL     E   V       D    +              R+ +   L +
Sbjct: 214 KTVTYRDAFAKHLGFDPIEVPIV-------DLHGLVDEMDSSLAESIGLDRDAL---LDV 263

Query: 427 INCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVC 486
           +     E  +  D P                P T  Q  +     +D     A +++L  
Sbjct: 264 LLSERIEPVFANDTP----------TILTRYPLT--QAALAKPCQDDPQC--AERFELFY 309

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAG 542
            G E+A+G      ++ + + + +    +             L RA + G+P   G+A G
Sbjct: 310 RGVELANGYDELLDADELKKRYEHNNQIRMAHGRPALAVETTLLRAMRQGLPACSGVALG 369

Query: 543 IDRIVMLLLGAKNVREVSLFPMSQ 566
           IDR++ML + A ++ +V   P ++
Sbjct: 370 IDRLLMLRVDAHSIEDVVPLPTTR 393



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 79/225 (35%), Gaps = 26/225 (11%)

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRC 154
           E+ A  +  ++ A  L     G+      +          + +L   + +R  ++  +R 
Sbjct: 40  EIDADSVREVTAAGLLRGNQQGKNTTRSEMNASS------KPSLAVRLRQRAEMLREIRR 93

Query: 155 RMIAENFIECSTPILTASSPEGA-RDFLVPSRVNQGSF--------YALPQAPQQYKQLL 205
                 FIE   P L+      A  D +       G F        + L  +P+   + L
Sbjct: 94  FFDDRGFIEVQPPCLSRDCVVDAFLDPIEVESSQVGLFGELDSPTKFYLQTSPESAMKRL 153

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           +A G    + I P FR  +  + R   EF  L+      +    +  + N+   V +   
Sbjct: 154 LAEGAPSIYAITPVFRKGETGA-RHNVEFSMLEWYEVGGDAASAIELLGNLAVEVLQ--- 209

Query: 266 NGNTVSNNFLRICYDDAI-RRYGTDKPDLRNPIIMHNVTEHFVHS 309
                S +F  + Y DA  +  G D  ++   + +H + +    S
Sbjct: 210 -----SPSFKTVTYRDAFAKHLGFDPIEVPI-VDLHGLVDEMDSS 248


>gi|71656431|ref|XP_816763.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70881912|gb|EAN94912.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 234

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 58/172 (33%), Gaps = 11/172 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R+ G V   R  G I F+ +R     +  V    +      K +  E ++   G ++   
Sbjct: 48  RIRGRVETTRIRGKIAFIHLRQPPCHSIQVVASAAEIVRRVKELTPESIIDATGTLV--P 105

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
           AE    ++     EL A++++++S A         +       R  +R +D+R       
Sbjct: 106 AERPVTSVSCKNYELHAERVDVVSRAATPLPFPIKDCNTKLDTRLNHRVMDMRTP----- 160

Query: 142 IVKRTRIINSMRCRMIAENFIECST--PILTASSPEGARDFLVPSRVNQGSF 191
                 ++  +   + A   +   T  P+    + E A             F
Sbjct: 161 --LTASVLRLVSAHVRARLCLWSRTAGPMDHGKTNEHAASHRTHGMNEHVHF 210


>gi|258541374|ref|YP_003186807.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256632452|dbj|BAH98427.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256635509|dbj|BAI01478.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256638564|dbj|BAI04526.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256641618|dbj|BAI07573.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256644673|dbj|BAI10621.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256647728|dbj|BAI13669.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256650781|dbj|BAI16715.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256653772|dbj|BAI19699.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 341

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 9/151 (5%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGAR--DFLVPSRVNQG--SFYALPQAPQ 199
           +R  ++   R  + A   +E  TP    +  E      F        G      L  +P+
Sbjct: 28  RRNLVLRGARAFLEARGCVEVETPYAVPTPGEEVHLQPFHTVQEAPDGVQQNLFLHTSPE 87

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + ++A+     FQ A  +R+ +  SD    EF  L+     +  + +++  E +L+ 
Sbjct: 88  FAMKRIVAATGLPVFQFARVWRNGE-GSDLHAPEFTMLEWYQPNMTLEGLMDETEALLQA 146

Query: 260 VFEEFSNGNTV----SNNFLRICYDDAIRRY 286
           V     + +      S  F R+   +A  R+
Sbjct: 147 VLPPILHHSGHSLNISGPFERLTMQEAFHRH 177



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 42/123 (34%), Gaps = 10/123 (8%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E      +  F  + +   Q  +      D     A +++L   G E+A+       +  
Sbjct: 219 EPAIGRTRPTFLTH-WPASQAALARKSPQDPR--VALRFELYAAGMELANAFEELTDATE 275

Query: 504 MLQAFSN-VGISKEVVENRFGG-----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               F       K +  NR        L  A    MP   GIA G DR+VML  G   ++
Sbjct: 276 QRLRFEADRHQRKTLYPNRPDWPVDEKLLSALPH-MPTCSGIALGFDRLVMLACGTTRIQ 334

Query: 558 EVS 560
            V 
Sbjct: 335 NVL 337


>gi|58038708|ref|YP_190672.1| lysyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|58001122|gb|AAW60016.1| Lysyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 212

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 9/151 (5%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYA--LPQAPQ 199
           +R +++ S+R       ++E  TP       E    R F        GS  A  L  +P+
Sbjct: 20  RRAQMVRSVRTFFEERGYLEVETPFAVPVPGEEVHLRCFRTELERPDGSREARFLHTSPE 79

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + ++A+     FQ+A  +R+ +  S+    EF  L+      +   +++  E  LR 
Sbjct: 80  FAMKRIVAATGRPVFQMARVWRNGEA-SNTHAPEFTMLEWYRPGADLSSLMDETEAFLRA 138

Query: 260 VFEEF----SNGNTVSNNFLRICYDDAIRRY 286
           +         +   +S  F R+    A  RY
Sbjct: 139 LLPPVVHRGMDVIDLSLPFERLTMQAAFARY 169


>gi|165976960|ref|YP_001652553.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|165877061|gb|ABY70109.1| lysine--tRNA ligase [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
          Length = 327

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 58/128 (45%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-----RDFLVPSRVNQGSFYAL 194
           +N++KR++I+  +R        +E  TP L+  S             +    ++     L
Sbjct: 18  QNLIKRSKIMAEIRQFFKDRGVLEVETPALSEFSVTDVHLSTFSTQFLSPFSSEAKTLHL 77

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 78  MTSPEYHMKRLLAAGSGAIFQLCRVFRNEEAGKRHNP-EFTMLEWYRPHFDMYRLINEVD 136

Query: 255 NVLRGVFE 262
           ++L+ + +
Sbjct: 137 DLLQQILD 144



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 55/123 (44%), Gaps = 7/123 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  +++    ++ F   Q  +  +   D     A ++++   G E+A+G      ++ 
Sbjct: 203 EANIGKERPTAVYH-FPSSQAALAQISSEDHR--VAERFEVYYQGLELANGFHELSDAKE 259

Query: 504 MLQAFSNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
            ++ F    + +  +    +        A + G+P   G+A G+DR++M+ + A+ + EV
Sbjct: 260 QMRRFEQDNVQRAQMGLPAQQLDSRFLAALKAGIPNCSGVALGVDRLMMIAMNAEKIDEV 319

Query: 560 SLF 562
             F
Sbjct: 320 MAF 322


>gi|28199805|ref|NP_780119.1| lysyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|28057926|gb|AAO29768.1| lysyl-tRNA synthetase [Xylella fastidiosa Temecula1]
          Length = 317

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 6/128 (4%)

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYA-- 193
           TL   +  R R+   +R        +E  TP+L+A+   E                 A  
Sbjct: 3   TLIDTLRLRARLNTMIRRFFADRGVLEVETPLLSAAGNTEPNIHSFTTCFTGHCDAGAAQ 62

Query: 194 --LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  +P+   + L+A+G    +++   FR+ +      P EF  L+      +   +  
Sbjct: 63  RWLRTSPEYPMKRLLAAGIGDCYELGRVFRNGEAGGRHNP-EFTMLEWYRVGWDHHRLAE 121

Query: 252 TMENVLRG 259
               ++R 
Sbjct: 122 ETTALVRE 129



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 13/111 (11%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML-------QAFSNV 511
           +   Q  +  ++ +D     A +++L     EIA+G    + +           Q  +  
Sbjct: 208 WPATQCALARIRSDDPP--VAERFELYLGVHEIANGYHELNDATEQRRRFEHDNQVRAAR 265

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+ +  ++     +        P   G+A G+DR++M +    ++ +V  F
Sbjct: 266 GLPQMPLDEPLLNVLSRL----PDCAGVAVGVDRLLMAMSATASIADVLAF 312


>gi|207108159|ref|ZP_03242321.1| lysyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 82

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 31/65 (47%)

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           E      +      E  +        A   GMPP  G   GIDR+VMLL GAK++++V L
Sbjct: 6   ERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVIL 65

Query: 562 FPMSQ 566
           FP  +
Sbjct: 66  FPAMR 70


>gi|303250999|ref|ZP_07337187.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307250806|ref|ZP_07532735.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307253185|ref|ZP_07535061.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|302650156|gb|EFL80324.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306857165|gb|EFM89292.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306859329|gb|EFM91366.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 327

 Score = 68.6 bits (166), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 58/128 (45%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-----RDFLVPSRVNQGSFYAL 194
           +N++KR++I+  +R        +E  TP L+  S             +    ++     L
Sbjct: 18  QNLIKRSKIMAEIRQFFKDRGVLEVETPALSEFSVTDVHLSTFSTQFLSPFSSEAKTLHL 77

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 78  MTSPEYHMKRLLAAGSGAIFQLCRVFRNEEAGKHHNP-EFTMLEWYRPHFDMYRLINEVD 136

Query: 255 NVLRGVFE 262
           ++L+ + +
Sbjct: 137 DLLQQILD 144



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 63/152 (41%), Gaps = 10/152 (6%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEE---KKIDFAHNPFTMPQGGMESLKGNDL 474
              A++ G    +      ++ F F E  E     ++    ++ F   Q  +  +   D 
Sbjct: 174 VEKARKHGFPCEDDENRDTLLQFLFSEIVEANIGKERPTAVYH-FPSSQAALAQISSEDH 232

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQ 530
               A ++++   G E+A+G      ++  ++ F    + +  +    +        A +
Sbjct: 233 R--VAERFEVYYQGLELANGFHELSDAKEQMRRFEQDNVQRAQMGLPAQQLDSRFLAALK 290

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            G+P   G+A G+DR++M+ + A+ + EV  F
Sbjct: 291 AGIPNCSGVALGVDRLMMIAMNAEKIDEVMAF 322


>gi|303253392|ref|ZP_07339535.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307246448|ref|ZP_07528521.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307248573|ref|ZP_07530588.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307255431|ref|ZP_07537238.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307259883|ref|ZP_07541597.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|302647737|gb|EFL77950.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306852652|gb|EFM84884.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306854923|gb|EFM87111.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306861615|gb|EFM93602.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306866053|gb|EFM97927.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
          Length = 327

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 58/128 (45%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-----RDFLVPSRVNQGSFYAL 194
           +N++KR++I+  +R        +E  TP L+  S             +    ++     L
Sbjct: 18  QNLIKRSKIMAEIRQFFKDRGVLEVETPALSEFSVTDVHLSTFSTQFLSPFSSEAKTLHL 77

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 78  MTSPEYHMKRLLAAGSGAIFQLCRVFRNEEAGKRHNP-EFTMLEWYRPHFDMYRLINEVD 136

Query: 255 NVLRGVFE 262
           ++L+ + +
Sbjct: 137 DLLQQILD 144



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 63/152 (41%), Gaps = 10/152 (6%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEE---KKIDFAHNPFTMPQGGMESLKGNDL 474
              A++ G    +      ++ F F E  E     ++    ++ F   Q  +  +   D 
Sbjct: 174 VEKARKHGFPCEDDENRDTLLQFLFSEIVEANIGKERPTAVYH-FPSSQAALAQISSEDH 232

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQ 530
               A ++++   G E+A+G      ++  ++ F    + +  +    +        A +
Sbjct: 233 R--VAERFEVYYQGLELANGFHELSDTKEQMRRFEQDNVQRAQMGLPAQQLDSRFLAALK 290

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            G+P   G+A G+DR++M+ + A+ + EV  F
Sbjct: 291 AGIPNCSGVALGVDRLMMIAMNAEKIDEVMAF 322


>gi|190150860|ref|YP_001969385.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307262013|ref|ZP_07543668.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|307264210|ref|ZP_07545801.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|189915991|gb|ACE62243.1| putative lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306868296|gb|EFN00118.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|306870456|gb|EFN02209.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 327

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 58/128 (45%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-----RDFLVPSRVNQGSFYAL 194
           +N++KR++I+  +R        +E  TP L+  S             +    ++     L
Sbjct: 18  QNLIKRSKIMAEIRQFFKDRGVLEVETPALSEFSVTDVHLSTFSTQFLSPFSSEAKTLHL 77

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 78  MTSPEYHMKRLLAAGSGAIFQLCRVFRNEEAGKRHNP-EFTMLEWYRPHFDMYRLINEVD 136

Query: 255 NVLRGVFE 262
           ++L+ + +
Sbjct: 137 DLLQQILD 144



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 63/152 (41%), Gaps = 10/152 (6%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEE---KKIDFAHNPFTMPQGGMESLKGNDL 474
              A++ G    +      ++ F F E  E     ++    ++ F   Q  +  +   D 
Sbjct: 174 VEKARKHGFPCEDDENRDTLLQFLFSEIVEANIGKERPTAVYH-FPSSQAALAQISSEDH 232

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQ 530
               A ++++   G E+A+G      ++  ++ F    + +  +    +        A +
Sbjct: 233 R--VAERFEVYYQGLELANGFHELSDAKEQMRRFEQDNVQRAQMGLPAQQLDSRFLAALK 290

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            G+P   G+A G+DR++M+ + A+ + EV  F
Sbjct: 291 AGIPNCSGVALGVDRLMMIAMNAEKIDEVMAF 322


>gi|307257600|ref|ZP_07539360.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306863903|gb|EFM95826.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
          Length = 327

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 58/128 (45%), Gaps = 6/128 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-----RDFLVPSRVNQGSFYAL 194
           +N++KR++I+  +R        +E  TP L+  S             +    ++     L
Sbjct: 18  QNLIKRSKIMAEIRQFFKDRGVLEVETPALSEFSVTDVHLSTFSTQFLSPFSSEAKTLHL 77

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N ++
Sbjct: 78  MTSPEYHMKRLLAAGSGAIFQLCRVFRNEEAGKRHNP-EFTMLEWYRPHFDMYRLINEVD 136

Query: 255 NVLRGVFE 262
           ++L+ + +
Sbjct: 137 DLLQQILD 144



 Score = 67.4 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 75/192 (39%), Gaps = 14/192 (7%)

Query: 382 VNTEAIRVRLDMQDGDSCFFIAG-DPLKFCSFAADARNHI---AQELGIINCNCFEFCWI 437
              + ++  LD +  +S  +             +  R  +   A++ G    +      +
Sbjct: 134 EVDDLLQQILDCEPAESYSYQFVFQTYVGLDPLSATRAKLVEKARKHGFPCEDDENRDTL 193

Query: 438 MDFPFYEWNEEE---KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
           + F F E  E     ++    ++ F   Q  +  +   D     A ++++   G E+A+G
Sbjct: 194 LQFLFSEIVEANIGKERPTAVYH-FPSSQAALAQISSEDHR--VAERFEVYYQGLELANG 250

Query: 495 GIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
                 ++  ++ F    + +  +    +        A + G+P   G+A G+DR++M+ 
Sbjct: 251 FHELSDAKEQMRRFEQDNVQRAQMGLPAQQLDSRFLAALKAGIPNCSGVALGVDRLMMIA 310

Query: 551 LGAKNVREVSLF 562
           + A+ + EV  F
Sbjct: 311 MNAEKIDEVMAF 322


>gi|257457748|ref|ZP_05622909.1| tRNA synthetase, class II family [Treponema vincentii ATCC 35580]
 gi|257444798|gb|EEV19880.1| tRNA synthetase, class II family [Treponema vincentii ATCC 35580]
          Length = 342

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 64/170 (37%), Gaps = 17/170 (10%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQGS-------FYALP 195
            R   + + R   I  +++E  TP L  +  PE   +      +              L 
Sbjct: 8   FRAACLQAARNFFIGCDYLELDTPALAPALIPESCLEVFRTEYLKPFKTGEEAAVPLFLV 67

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + ++A+     FQ++ C+R+ +        EF  L+      +  + +   E 
Sbjct: 68  PSPEVFIKPVIAAHGRSVFQLSKCYRNCESVGHIHSPEFTMLEYYTMQADYRNSILITEA 127

Query: 256 VLRGVFEEFSNGN--------TVSNNFLRICYDDAIRRY-GTDKPDLRNP 296
            L+ + +  +            +S  FL++  D+A +RY G    +   P
Sbjct: 128 FLQTMAQAVAGLPLADPELGAVLSKPFLQLTMDEAFKRYAGFSLAEAETP 177



 Score = 46.6 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 11/84 (13%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVM-------LQAFSNVGISKEVVENRFGGLYRAFQCG 532
            ++++   G E+A+       +E +           +        V + FGG+       
Sbjct: 255 ERWEVYVRGVELANCYTEARDAEEINHSFADEAAIKNTTARVPHPVPDNFGGICAR---- 310

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNV 556
           MPP  G+A G DR++MLL G K +
Sbjct: 311 MPPCSGVAMGFDRLIMLLGGKKTL 334


>gi|27379498|ref|NP_771027.1| lysyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|27352650|dbj|BAC49652.1| lysyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 354

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 12/134 (8%)

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV-- 186
           R LD RR  L      R  +  ++R     + F+E  T +L  S P        P     
Sbjct: 15  RHLD-RRPFLQA----RGAVTGALRGFFAEQGFMEVETSVLQVS-PGNETHLHAPRTEIV 68

Query: 187 -NQGSFY--ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              GS     L  +P+   + L+A+G  R F+ A  FRD + R D    EF  L+   + 
Sbjct: 69  RPDGSRASRYLRTSPEFACKKLLAAGEPRIFEFARVFRDRE-RGDLHLPEFTMLEWYRAG 127

Query: 244 VEQDDILNTMENVL 257
              D I+     V+
Sbjct: 128 APYDAIMADTVVVI 141



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 41/114 (35%), Gaps = 5/114 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE-- 516
           F  P       +        A ++++   G E+A+G      +E   + F+     K+  
Sbjct: 238 FEYPSPEAALARVKAGDPRVAERFEVYACGVELANGFGELTDAEEQRRRFTESMAEKQRR 297

Query: 517 --VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNF 568
                        A    MP   G+A G DR+VML  GA  + +V   P +   
Sbjct: 298 YGEAYPLDEDFLAAV-AAMPEASGVALGFDRLVMLASGATRIDQVVWTPPANEA 350


>gi|320538212|ref|ZP_08038107.1| tRNA synthetase class II [Treponema phagedenis F0421]
 gi|320145029|gb|EFW36750.1| tRNA synthetase class II [Treponema phagedenis F0421]
          Length = 373

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 21/161 (13%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTAS----------SPEGARDFLVPSRVNQGSFYA 193
            R   + + R   I  N++E  TP L A+            E  + F+      +     
Sbjct: 41  FRALCLQTARDFFIENNYLELDTPALAAALIPETCLEVFQTEAIQPFMPKESAKK---LF 97

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + ++A      FQI+ C+R+ +        EF  L+      +  D +   
Sbjct: 98  LVPSPEVFIKPVIAQTKRSVFQISKCYRNGESVGRIHSPEFTMLEYYTMNADYKDSIKIT 157

Query: 254 ENVLRGVFEEFSN--------GNTVSNNFLRICYDDAIRRY 286
           E+    + ++  N         N  +  F  +  +DA  RY
Sbjct: 158 ESFFCFIIDKIKNHPLASPEACNFFAEGFQLLTMEDAFIRY 198



 Score = 44.7 bits (104), Expect = 0.049,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 11/84 (13%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-------VGISKEVVENRFGGLYRAFQCG 532
            ++++   G E+A+       S+ + + F+          +        FG +       
Sbjct: 288 ERWEVYAGGIELANCYTEERDSDTVNRYFAEEAALKEKTALVPHPSVKNFGDICAQ---- 343

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNV 556
           MPP  G+A G+DR++ LL G K +
Sbjct: 344 MPPCSGVALGMDRLIALLAGRKTI 367


>gi|297520290|ref|ZP_06938676.1| lysyl-tRNA synthetase [Escherichia coli OP50]
          Length = 57

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 26/52 (50%)

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            +           A + G+PP  G+  GIDR++ML   +  +R+V LFP  +
Sbjct: 3   DDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFPAMR 54


>gi|330862354|emb|CBX72513.1| hypothetical protein YEW_HJ32730 [Yersinia enterocolitica W22703]
          Length = 102

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 4/89 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMP 534
           A ++++   G E+A+G       +  L+ F     S+E            L  A + G+P
Sbjct: 10  AERFEVYFKGIELANGFHELTDGDEQLKRFEQDNRSREKRGLPQHPIDMNLIDALKHGLP 69

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              G+A G+DR+VML LGA+ + +V  FP
Sbjct: 70  DCSGVALGVDRLVMLALGAEKLSDVIAFP 98


>gi|197124172|ref|YP_002136123.1| tRNA synthetase class II (D K and N) [Anaeromyxobacter sp. K]
 gi|196174021|gb|ACG74994.1| tRNA synthetase class II (D K and N) [Anaeromyxobacter sp. K]
          Length = 339

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 50/134 (37%), Gaps = 24/134 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              W++D+P                        +  +K  D     A +++L   G E+A
Sbjct: 221 RPTWLVDWP-------------------ASMAALSKVKAADPR--WAERFELYAGGLELA 259

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF--QCG-MPPHGGIAAGIDRIVML 549
           +G      +             +  +      L   F    G MP  GG+A G DR++ML
Sbjct: 260 NGFTELTDAREQRARLVEEQALRRRLGRPAYPLDERFLEAVGRMPEAGGVAVGFDRVLML 319

Query: 550 LLGAKNVREVSLFP 563
           L GA ++ +V LFP
Sbjct: 320 LTGAASIEDVLLFP 333



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 6/137 (4%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPSRVNQG--- 189
             D   +    R R+   +R  +    + E  TP L  +   E   D    + V +G   
Sbjct: 1   MSDRRREAARARARLSAEVRRILGGLGYEEVETPSLVPAPGMEPHIDAFQATFVPEGGGA 60

Query: 190 -SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
                L  +P+   + L+A GF+R FQ+A  FR+ +      P EF  L+   +  +   
Sbjct: 61  SRPLWLQNSPEYAMKRLLADGFERVFQLARVFRNGEVSRTHNP-EFTMLEFYRAGTDYRG 119

Query: 249 ILNTMENVLRGVFEEFS 265
           I+  +E ++ G      
Sbjct: 120 IMADLEVLVEGAARALL 136


>gi|158424020|ref|YP_001525312.1| lysyl-tRNA synthetase protein [Azorhizobium caulinodans ORS 571]
 gi|158330909|dbj|BAF88394.1| lysyl-tRNA synthetase protein [Azorhizobium caulinodans ORS 571]
          Length = 382

 Score = 68.2 bits (165), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 5/103 (4%)

Query: 160 NFIECSTPILTASSPEGAR--DFLVPSRVNQGS--FYALPQAPQQYKQLLMASGFDRYFQ 215
           +F+E  TP+L  S    A    F    R  +G    Y L  +P+   + L+A+G  R F+
Sbjct: 71  DFLEVETPVLQVSPGNEAHLHAFATLWRRPEGGTLPYYLRTSPEFAAKKLLAAGEPRIFE 130

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            A  FRD +  +   P EF  L+   +    + ++     +LR
Sbjct: 131 FARVFRDRERGTTHHP-EFTMLEWYRAREPYETLMEDCVRLLR 172



 Score = 49.7 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 39/106 (36%), Gaps = 18/106 (16%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK-EVVENRF---GGLYRAFQCGMP 534
           A +++L   G E+A+            + F      K  +   R+    GL  A +  MP
Sbjct: 291 AERFELYACGVELANAFGELTDPVEQRRRFEIEMAEKARLYGERYPIDEGLLEALEH-MP 349

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVS 580
              G A G DR+ ML  GA                D ++ +P  +S
Sbjct: 350 EASGCALGFDRLAMLASGA-------------RRLDDMLWAPVEIS 382


>gi|316934334|ref|YP_004109316.1| lysyl-tRNA synthetase-like protein GenX [Rhodopseudomonas palustris
           DX-1]
 gi|315602048|gb|ADU44583.1| lysyl-tRNA synthetase-related protein GenX [Rhodopseudomonas
           palustris DX-1]
          Length = 364

 Score = 68.2 bits (165), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 54/148 (36%), Gaps = 12/148 (8%)

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE 175
            E+  P     + R+LD         +  R  +  S+R       F E  T IL  S P 
Sbjct: 15  KEQSGPSPWWNRDRYLD-----RQPFLRARGAVTRSVRAWFETAGFTEVETAILQIS-PG 68

Query: 176 GARDFLVPSRVNQGSF-----YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL 230
                  P     G         L  +P+   + L+A+G  R F++A  FRD + R    
Sbjct: 69  NETHLHAPRTELLGPDGERRSRYLRTSPEFACKKLLAAGETRIFELARVFRDRE-RGRVH 127

Query: 231 PGEFYQLDMEMSFVEQDDILNTMENVLR 258
             EF  L+   +      +++    ++R
Sbjct: 128 LPEFTMLEWYRAEAPYQQVIDDCVALVR 155



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 5/114 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +  P+  +   K +D     A +++L   G E+A+G      +      F      KE  
Sbjct: 253 YPAPEAALARTKPDDPR--VAERFELYACGVELANGFGELTDAGEQRARFVVAMDEKERR 310

Query: 519 ENRFGGLYRAFQCG---MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                 L  AF      MP   G+A G DR+VML  GA  + +V   P +    
Sbjct: 311 YGERYPLDEAFLAAVAEMPEASGVALGFDRLVMLAAGATTIDQVVWTPPAGEGA 364


>gi|325474986|gb|EGC78172.1| tRNA synthetase [Treponema denticola F0402]
          Length = 311

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 60/160 (37%), Gaps = 17/160 (10%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRV--------NQGSFYAL 194
            R   I + R   I +N++E  TP L+    PE   +      +        +QG    L
Sbjct: 8   LRALSIQAAREFFIKKNYLELDTPALSGELIPETCLEVFKTEYLSPSLSKDTHQGKALFL 67

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ Y + ++A      FQI+ C+R+ +   +    EF  L+         D +   E
Sbjct: 68  VPSPEVYIKPIIAQTSRSVFQISKCYRNAESIGNIHSPEFTMLEYYTVNANYKDSVKISE 127

Query: 255 NVLRGVFEEFSNG--------NTVSNNFLRICYDDAIRRY 286
             L  V +               +S  F  +  D+A R+Y
Sbjct: 128 EFLTHVSDRVKENPLVDGEVLKILSKGFDCLTMDEAFRKY 167


>gi|307544318|ref|YP_003896797.1| lysyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307216342|emb|CBV41612.1| lysyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 324

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 28/147 (19%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL---------------TASSPEG 176
           D R       + +R R+I  +R        +E  TP+L                A++PEG
Sbjct: 4   DWRPSAEIATLRERARLIGEVRAFFAEHGVLEVETPVLGHGGSTDVHLASLSCVATTPEG 63

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
                            L  +P+ + + L+A+G    FQ+A  FRD +  +     EF  
Sbjct: 64  RERLW------------LQTSPEFHMKRLLAAGSGPIFQLARSFRDGEVGARHNL-EFTM 110

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263
           L+        D+++     ++R V  +
Sbjct: 111 LEWYRPGFGLDELIEETTRLIRRVLPD 137



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 6/101 (5%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE----NRFGGL 525
           +  +     A ++++ C G E+A+G      +E     F     ++        +    L
Sbjct: 223 RDPEDGQWVASRFEVYCRGLELANGYDELTDAEEQRARFEADQAARRSAGLPEVDSDARL 282

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF--PM 564
             A   GMP   G+A G+DR++ L LG  +V EV  F  P 
Sbjct: 283 VAALASGMPEGSGVALGLDRLIQLALGKTSVAEVMAFATPK 323


>gi|42527784|ref|NP_972882.1| tRNA synthetase, class II family protein [Treponema denticola ATCC
           35405]
 gi|41818612|gb|AAS12801.1| tRNA synthetase, class II family protein [Treponema denticola ATCC
           35405]
          Length = 345

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 60/160 (37%), Gaps = 17/160 (10%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTAS-SPEGARDFLVPSRVNQ--------GSFYAL 194
            R   I + R   I +N++E  TP L+    PE   +      ++         G    L
Sbjct: 8   LRALSIQAAREFFIKKNYLELDTPALSGELIPETCLEVFKTEYLSPSLLKKSPTGKALFL 67

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+ Y + ++A      FQI+ C+R+ +   +    EF  L+         D +   E
Sbjct: 68  VPSPEVYIKPIIAQTSRSVFQISKCYRNAESIGNIHSPEFTMLEYYTVNANYKDSVKISE 127

Query: 255 NVLRGVFEEFSNG--------NTVSNNFLRICYDDAIRRY 286
             L  V +              T+S  F  +  D+A R+Y
Sbjct: 128 EFLSHVSDRVKENPLVDREVLKTLSKGFECLTMDEAFRKY 167



 Score = 39.7 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 63/193 (32%), Gaps = 29/193 (15%)

Query: 374 PVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE 433
           P++   +         +L + + ++      D  +      +     A E  +       
Sbjct: 171 PLSTEHSPEELAYYAEKLGLGEAEN----YSDWKE--DDLYELILVHAVEPNLPKNRLIA 224

Query: 434 FCWIMDFPFYEW---NEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFE 490
              I+D+P +      E  K++               + K   L      ++++  NG E
Sbjct: 225 ---ILDYPAFVPCLAAENSKRV--------------LNKKNEALEWKTVERWEVYLNGVE 267

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF---QCGMPPHGGIAAGIDRIV 547
           +A+          +   F N    K+          + F      M P  G+A G DR++
Sbjct: 268 LANCYTEERNKSKINSYFKNENELKQKNALVPHPPVKNFGETCSKMSPCSGVAMGFDRLI 327

Query: 548 MLLLGAKNVREVS 560
           MLL G K +  + 
Sbjct: 328 MLLAGKKTLSPII 340


>gi|85711840|ref|ZP_01042895.1| Truncated class II lysyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85694237|gb|EAQ32180.1| Truncated class II lysyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 319

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 6/108 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +   +     A ++++   G E+A+G      S      F+    ++E  
Sbjct: 209 FPASQAALAQIDSKNPS--VARRFEIYWEGIELANGYYELSDSVEQSLRFNKDIAARERA 266

Query: 519 ENRFG----GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +  +      L  A + G+PP  G+A G DR++M+     ++  V  F
Sbjct: 267 QLPYRAADCFLIAALEHGLPPCAGVAMGFDRLLMIKTKETSIERVIPF 314



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 9/160 (5%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
           D R       + KR  ++  +R      + +E  TP+L            + +R +Q + 
Sbjct: 3   DWRSKATLNVLKKRAELLRQLRSFFFERDVLEVDTPLLCQHGVTDRHIENLSTRDSQHNL 62

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  +P+   + L+A      +Q++   RD+         EF  L+      + D ++ 
Sbjct: 63  RYLQTSPEYAMKRLLAQYGHSLYQLSHVVRDDPVG-RHHNPEFMMLEWYRVGFDDDQLIA 121

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
            +  +L  V +        +   +++ Y DA  ++    P
Sbjct: 122 EIGELLMTVAD--------APPLVKLTYQDAFLQHMQCDP 153


>gi|327539714|gb|EGF26320.1| lysyl-tRNA synthetase family protein [Rhodopirellula baltica WH47]
          Length = 364

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 4/92 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMP 534
           A +++L   G E+A+G      ++ + + + +    +             L RA + G+P
Sbjct: 272 AERFELFYRGVELANGYDELLDADELKKRYEHNNQIRMAHGRPALAVETTLLRAMRQGLP 331

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              G+A GIDR++ML + A ++ +V   P ++
Sbjct: 332 ACSGVALGIDRLLMLRVDAHSIEDVVPLPTTR 363



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 78/225 (34%), Gaps = 26/225 (11%)

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRC 154
           E+ A  +  ++ A  L     G+      +          + +L   + +R  ++  +R 
Sbjct: 10  EIDADSVREVTAAGLLRGNQQGKNTTRSEMNASS------KPSLAVRLRQRAEMLREIRR 63

Query: 155 RMIAENFIECSTPILTASSPEGA-RDFLVPSRVNQGSF--------YALPQAPQQYKQLL 205
                 FIE   P L+      A  D +       G F        + L  +P+   + L
Sbjct: 64  FFDDRGFIEVQPPCLSRDCVVDAFLDPIEVESSQVGLFGELDSPTKFYLQTSPESAMKRL 123

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           +A G    + I P FR  +  + R   EF  L+      +    +  + N+   V +   
Sbjct: 124 LAEGAPSIYAITPVFRKGETGA-RHNVEFSMLEWYEVGGDAASAIELLGNLAVEVLQ--- 179

Query: 266 NGNTVSNNFLRICY-DDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
                S +F  + Y D   +  G D  ++   + +H + +    S
Sbjct: 180 -----SPSFKTVTYRDTFAKHLGFDPIEIPI-VDLHGLVDEMDSS 218


>gi|116203613|ref|XP_001227617.1| hypothetical protein CHGG_09690 [Chaetomium globosum CBS 148.51]
 gi|88175818|gb|EAQ83286.1| hypothetical protein CHGG_09690 [Chaetomium globosum CBS 148.51]
          Length = 231

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 60/176 (34%), Gaps = 23/176 (13%)

Query: 71  LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAE--ELPLPVFGEREYPESIRFKY 128
           + ++G V S  +   +  +  G     A  ++ L  A+  E   P   + + PE   +  
Sbjct: 50  VTVNGFVRSVRSMKAHQFVALGDGSSLAP-LQALVRADRAEERSPFQKKYQTPELSPY-- 106

Query: 129 RFLDLRRDTLHKNI---VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR 185
            +  L  +           R+  I S+       +F +   PI+T+S  EGA +    + 
Sbjct: 107 -YAALAAENFQSIPSLLRLRSEAIASLTQFFAGRSFTQTHPPIITSSDCEGAGEVFTVTP 165

Query: 186 VNQ-----------GSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
            N             SF+          Q     +A      + ++P FR E   +
Sbjct: 166 ANDTPVPADKDASEDSFFRSKKYLTVSTQLHLEALAQAVGNVWTLSPVFRAEKSDT 221


>gi|262401135|gb|ACY66470.1| aspartyl-tRNA synthetase [Scylla paramamosain]
          Length = 132

 Score = 67.8 bits (164), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ-DDILNTMENVLRG 259
           YKQ+ +A  F + F I P FR E+  + R   EF  LD+EM+F     + LNT+ N+   
Sbjct: 1   YKQMAIAGDFGKVFTIGPVFRAENSNTHRHLTEFVGLDLEMAFTHHYHEALNTIGNMFTE 60

Query: 260 VFEEFSNGNTVS 271
           +F    +     
Sbjct: 61  IFRGLRDNYADE 72


>gi|254781066|ref|YP_003065479.1| putative lysyl-tRNA synthetase protein [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040743|gb|ACT57539.1| putative lysyl-tRNA synthetase protein [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 355

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 66/173 (38%), Gaps = 20/173 (11%)

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP------EGARDFL 181
            R    RR      ++KR  I +S+R   +   FIE  +  L  S          + + +
Sbjct: 11  NRDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELI 67

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEM 241
           +   + +     L  +P+   + L+A+G ++ F  A  +R+ +      P EF  L+   
Sbjct: 68  IQDHIRK--PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYR 124

Query: 242 SFVEQDDILNTMENVLRGVFE-------EFSNGNTVSNNFLR-ICYDDAIRRY 286
           +    + ++    N++R   E        F N N    +    I   +A  RY
Sbjct: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 7/116 (6%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +  P+  + ++   D       +++L     E+ +              F      K+ +
Sbjct: 241 YPAPESALANIYPADPR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298

Query: 519 ENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCD 570
            N                MP   GIA G DR+VML+ GA N+ EV   P SQ+  +
Sbjct: 299 YNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353


>gi|221135520|ref|ZP_03561823.1| asparaginyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 65

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 23/50 (46%)

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
             +G      + G  PH G   G +R+V  + G +NVR+V  FP +    
Sbjct: 14  EDYGWYRDLRRYGTVPHSGFGLGFERLVAYVTGMQNVRDVIPFPRTPGSA 63


>gi|94676569|ref|YP_589016.1| lysyl-tRNA synthetase-like GenX [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|166229782|sp|Q1LSP8|SYK3_BAUCH RecName: Full=Uncharacterized protein YjeA
 gi|94219719|gb|ABF13878.1| lysyl-tRNA synthetase-like GenX [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 327

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 12/111 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS-------NV 511
           F   Q  +  L  +D     A ++++  +G E+A+G      +++  + F         +
Sbjct: 217 FPASQSLLAELNSDDHR--VAERFEVYFHGIELANGSRELTDADLQRERFMQENNKQVAM 274

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                +++ +   L  A +CG+P   G+A GIDR++ML L AK++ EV  F
Sbjct: 275 NRPPRLIDEQ---LLAALECGLPSCSGVALGIDRLLMLTLKAKHISEVMAF 322



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 59/130 (45%), Gaps = 8/130 (6%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN-------QGSFY 192
            N+  R +IIN++R   I    +E  TP+++ ++      F   + +        +G   
Sbjct: 14  HNLFIRAKIINNIRIFFINRGLLEVETPVMSHTTVPDIYLFPFQTNLYFLEKVPEKGVPM 73

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+ + + L+A+G    FQI   FR+++  +   P EF  L+    +    DI++ 
Sbjct: 74  YLITSPEYHMKRLLAAGSGPIFQICHSFRNQEYGNYHNP-EFTLLEWYRPYYNMVDIMDE 132

Query: 253 MENVLRGVFE 262
           +   L+ +  
Sbjct: 133 VNIFLQTIIH 142


>gi|153822283|ref|ZP_01974950.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae B33]
 gi|12655821|gb|AAK00611.1| lysyl-tRNA synthetase-like protein [Vibrio cholerae]
 gi|126520179|gb|EAZ77402.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae B33]
          Length = 51

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 18/43 (41%), Positives = 24/43 (55%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
               A + G+PP  G   GIDR+VMLL     +R+V LFP  +
Sbjct: 6   DYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFPAMR 48


>gi|238613610|ref|XP_002398484.1| hypothetical protein MPER_00915 [Moniliophthora perniciosa FA553]
 gi|215475115|gb|EEB99414.1| hypothetical protein MPER_00915 [Moniliophthora perniciosa FA553]
          Length = 144

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 49/136 (36%), Gaps = 13/136 (9%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EIASGG 495
           I+  P + +            PF M +  M    GND L +     DL+     EI  G 
Sbjct: 21  IIGKPVFLY-----GFPAELKPFYMKK--MPDQGGNDKL-MLTESCDLLMPYVGEIVGGS 72

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           +R    + ++ A+   GI        +       + G  PHGG   G++R +  L     
Sbjct: 73  MRIDDYDELVAAYKREGIDPAA----YYWYTDQRKYGTCPHGGYGLGVERFLAWLANRYT 128

Query: 556 VREVSLFPMSQNFCDL 571
           VRE  L+P        
Sbjct: 129 VRECVLYPRWPGRATP 144


>gi|118120219|ref|XP_001233569.1| PREDICTED: hypothetical protein, partial [Gallus gallus]
          Length = 73

 Score = 67.8 bits (164), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 42/73 (57%)

Query: 88  NIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTR 147
            + TG IE+ A+  E+L+  ++LP  +    +  E++R +YR+LDLR   L  N+  R++
Sbjct: 1   KMPTGDIEVKAETAEVLNFCKKLPFEIKDFIKKSEALRMQYRYLDLRSSQLQYNLRLRSQ 60

Query: 148 IINSMRCRMIAEN 160
           ++  MR  +   +
Sbjct: 61  VVMRMREYLCNHH 73


>gi|192291172|ref|YP_001991777.1| tRNA synthetase class II (D K and N) [Rhodopseudomonas palustris
           TIE-1]
 gi|192284921|gb|ACF01302.1| tRNA synthetase class II (D K and N) [Rhodopseudomonas palustris
           TIE-1]
          Length = 351

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 54/147 (36%), Gaps = 12/147 (8%)

Query: 121 PESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF 180
           P     + R+LD         +  R  +  ++R    A  F E  T IL  S P      
Sbjct: 7   PSPWWNRDRYLD-----RQPFLRARGGVTRAVRAWFEAAGFTEVETAILQIS-PGNETHL 60

Query: 181 LVPSRVNQGSF-----YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
             P     G         L  +P+   + L+A+G  R F++A  FRD + R      EF 
Sbjct: 61  HAPRTELLGPDGERRIRYLRTSPEFACKKLLAAGETRIFELARVFRDRE-RGRVHLPEFT 119

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFE 262
            L+   +      +++    ++R   E
Sbjct: 120 MLEWYRAEAPYQQVIDDCIALVRVAAE 146



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 5/108 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +  P+  +   K +D     A +++L   G E+A+G      +    + F      KE  
Sbjct: 240 YPAPEAALARTKPDDPR--VAERFELYACGVELANGFGELTNAAEQRERFMAAMDEKERR 297

Query: 519 ENRFGGLYRAFQCG---MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 L  AF      MP   G+A G DR+VML  GA  + +V   P
Sbjct: 298 YGERYPLDEAFLAAVGEMPEASGVALGFDRLVMLAAGATTIDQVVWTP 345


>gi|15602067|ref|NP_245139.1| lysyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|13431891|sp|P57824|SYK3_PASMU RecName: Full=Uncharacterized protein YjeA
 gi|12720425|gb|AAK02286.1| LysU [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 323

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 54/127 (42%), Gaps = 6/127 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-----RDFLVPSRVNQGSFYALP 195
           N++ R +II  +R        +E  TP+L+                +     +     L 
Sbjct: 15  NLLARAKIIAEIRRFFTDRGLLEVETPVLSEFGVTDVHLSTFNTTFISPTAEKSKALWLS 74

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   ++N +++
Sbjct: 75  TSPEYHMKRLLAAGSGPIFQLCHVFRNEEAGQRHNP-EFTMLEWYRPHFDMYRLINEVDD 133

Query: 256 VLRGVFE 262
           +L+ + +
Sbjct: 134 LLQQILD 140



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 8/118 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
           E  +   H P T  Q  +  +   D     A +++    G E+A+G          L  F
Sbjct: 205 ENPVAVYHFPAT--QAALAQISSEDHR--VAERFEFYYKGLELANGFHELTDVNEQLHRF 260

Query: 509 SNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               + ++ +          L  A Q G+P   GIA G+DR++M+ LGA  + EV  F
Sbjct: 261 EQDNVQRQKMGLPQRQIDKRLLGALQAGVPNCSGIALGVDRLLMIALGANAIHEVMAF 318


>gi|86160144|ref|YP_466929.1| tRNA synthetase, class II (D, K and N) [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85776655|gb|ABC83492.1| tRNA synthetase, class II (D, K and N) [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 340

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 51/138 (36%), Gaps = 32/138 (23%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              W++D+P                        +  +K  D     A +++L   G E+A
Sbjct: 222 RPTWLVDWP-------------------ASMAALSKVKAADPR--WAERFELYAGGLELA 260

Query: 493 SGGIRNHMSEVMLQAFSNVGISK-------EVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
           +G      +             +         ++ +F     A    MP  GG+A G DR
Sbjct: 261 NGFTELTDAREQRARLLEEQALRRRLGRPGYPLDEKF---LEAVGR-MPEAGGVAVGFDR 316

Query: 546 IVMLLLGAKNVREVSLFP 563
           ++MLL GA ++ EV LFP
Sbjct: 317 LLMLLTGAASIEEVLLFP 334



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 6/121 (4%)

Query: 150 NSMRCRMIAENFIECSTPILTASSP-EGARDFLVPSRVNQG----SFYALPQAPQQYKQL 204
             +R  +    + E  TP L  +   E   D    + V +G        L  +P+   + 
Sbjct: 18  AEVRRILGGLGYEEVETPCLVPAPGMEPHIDAFQATFVPEGGGTSRPLWLQNSPEYAMKR 77

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEF 264
           L+A GF+R FQ+A  FR+ +      P EF  L+   +  +   I+  +E ++ G     
Sbjct: 78  LLAEGFERVFQLARVFRNGEVSRTHNP-EFTMLEFYRAGTDYRGIMADLEALVDGAARAL 136

Query: 265 S 265
            
Sbjct: 137 L 137


>gi|1169858|sp|P43151|GPA_LEIDO RecName: Full=Putative guanine nucleotide-binding protein subunit
           alpha
 gi|556256|gb|AAA50285.1| G protein alpha subunit [Leishmania donovani]
          Length = 464

 Score = 67.4 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIA 540
           V    E+A+     +   V  + F     +++  ++       G   A +  +PP GG  
Sbjct: 240 VGGQRELANAHTELNNPIVQREEFVKQLRNRDKGDDESMEIDEGFVAALEHALPPTGGWG 299

Query: 541 AGIDRIVMLLLGAKNVREVSLFPMSQ 566
            GIDR+VM L    N++EV LFP  +
Sbjct: 300 LGIDRLVMFLTSQSNIKEVLLFPAMK 325


>gi|119720046|ref|YP_920541.1| asparagine synthetase A [Thermofilum pendens Hrk 5]
 gi|119525166|gb|ABL78538.1| aspartate-ammonia ligase [Thermofilum pendens Hrk 5]
          Length = 364

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 4/134 (2%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
           R          +  I+ ++R  + +  F E   PI+   +  G R     +    G  Y 
Sbjct: 53  RESKYATVFRIQASILRAIREYLDSHGFTEALPPIIGPVTDPGIRGAKQVTVDFYGHEYK 112

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR---SDRLPGEFYQLDMEMSFVEQDDIL 250
           +  +   YKQ  MA+   + + ++P  R E      + R   EF+Q+D+E+     +D +
Sbjct: 113 VMSSAILYKQ-YMAAVLGKVYFVSPNIRLEPNDSIFTGRHLVEFFQVDIEILDGTLEDAM 171

Query: 251 NTMENVLRGVFEEF 264
           +  E +   V    
Sbjct: 172 SLAEGLFMHVARYV 185



 Score = 40.8 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 60/209 (28%), Gaps = 26/209 (12%)

Query: 366 SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            G +     +A+ L +     +              +      F  +       +   LG
Sbjct: 164 DGTLEDAMSLAEGLFMHVARYVEEVHGADLEKLGRTLPEYRTPFARYTHAEAVELVNRLG 223

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN-----PFTMPQGGMESLKGNDLLSIKAF 480
             N    E  W           E +K+  AH+      +  P+G        D       
Sbjct: 224 CRNPRNTEILW-----------ECEKVLSAHHTSPLFIYGYPKGSRGFYNREDPERPGYL 272

Query: 481 Q-YDLVCN---GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP-P 535
           + +D++     G  I+ G      ++V+ +              ++       +   P  
Sbjct: 273 RDFDMLYPEGFGEAISGGEREYEPAKVIARI-----KESGEDPKKYKWFLEMLRDFYPLK 327

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             G   G++R+   + G + V E   +P 
Sbjct: 328 TAGFGIGVERLTRYICGLRAVWESRPYPK 356


>gi|296120866|ref|YP_003628644.1| Lysine--tRNA ligase [Planctomyces limnophilus DSM 3776]
 gi|296013206|gb|ADG66445.1| Lysine--tRNA ligase [Planctomyces limnophilus DSM 3776]
          Length = 356

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 2/121 (1%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPSRVNQGSFYALPQAPQQYK 202
            R+ ++ + R   +   + E +TPIL++    +   D  + +         L  +P+ + 
Sbjct: 23  LRSSLMAAARQFFLQAGYWEVTTPILSSEMVLDSWSDPFITTDAVTERPLFLQTSPEAHM 82

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
           + L+A+G    FQ +  FR  D    R   EF  L+      E  D +  +EN +R  F 
Sbjct: 83  KRLLAAGSGPIFQFSRGFRKGDFG-PRHNPEFTLLEWYFPEGELTDQIQFVENFIRLFFS 141

Query: 263 E 263
           E
Sbjct: 142 E 142



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 4/88 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE----NRFGGLYRAFQCGMP 534
           A +++L  +G E+ +G         +          +E       N    L  A     P
Sbjct: 264 ANRFELYIDGVELCNGYHELTDPVELAHRAQTHARLREKAGLPPINPPQRLMSAMAANFP 323

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              G++ G DR+VML LG   + +V  F
Sbjct: 324 SATGVSLGFDRLVMLALGTSTIADVMSF 351


>gi|12227246|emb|CAC21723.1| asparaginyl-tRNA synthetase-like protein [Staphylococcus aureus]
          Length = 147

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 53/154 (34%), Gaps = 31/154 (20%)

Query: 418 NHIAQELGIINCNCFE-----FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQ--GGMESLK 470
               ++ G  +            +I ++P                PF M       E++ 
Sbjct: 11  IEWGEDFGAPHETAIANHYDLPVFITNYP------------TKIKPFYMQPNPENEETVL 58

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
             DL++ + +         EI  G  R    E++ Q     G+     E  +       +
Sbjct: 59  CADLIAPEGYG--------EIIGGSERVDDLELLEQRVKEHGLD----EEAYSYYLDLRR 106

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            G  PH G   G++R V  + G ++VRE + FP 
Sbjct: 107 YGSVPHCGFGLGLERTVAWISGVEHVRETAPFPR 140


>gi|153862539|gb|ABS52743.1| putative lysyl-tRNA synthetase [Theileria uilenbergi]
          Length = 68

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%)

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
           +  +  +  +        A + G+PP GG   GIDR+ M L    N++EV  FP  +   
Sbjct: 1   HEDLGDDEAQPPDESFCTALEYGLPPTGGWGMGIDRLTMFLSDKNNIKEVIFFPTMRPIA 60

Query: 570 DL 571
           D 
Sbjct: 61  DP 62


>gi|70914528|ref|XP_731869.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56502186|emb|CAH84569.1| hypothetical protein PC301116.00.0 [Plasmodium chabaudi chabaudi]
          Length = 112

 Score = 67.4 bits (163), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
           PF M        K ND     +    +  N  EIA G  R     ++ +      ++   
Sbjct: 11  PFYM--------KLNDDKKTVSCMDVIFPNIGEIAGGSERETNLNILKEQMKKNKLNI-- 60

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             + +       + G  PH G   GIDR++M +L   N+R++  FP   N
Sbjct: 61  --DLYNPYLELRKYGNIPHSGFGLGIDRLIMYILSISNIRDIVPFPRYPN 108


>gi|1333771|emb|CAA83727.1| Lys-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 58

 Score = 67.4 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 19/42 (45%), Positives = 26/42 (61%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           L  A +  MPP  GI  GIDR+VMLL    ++++V LFP  +
Sbjct: 14  LVEALEHAMPPTAGIGIGIDRLVMLLTNCDSIKDVLLFPQMK 55


>gi|332968460|gb|EGK07526.1| lysine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 329

 Score = 67.4 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 10/128 (7%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP---SRV---NQGSFYA 193
           K   KR +++  +R        +E  TP+++ +   G  D  VP   + V   ++   + 
Sbjct: 19  KMAHKRAQMLTQIRQFFAERQVLEVQTPLMSKA---GNTDVFVPSISTNVTVQDKPQTHY 75

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+   + ++AS     +QI P FRD +  S R   EF  L+      + + +   +
Sbjct: 76  LHTSPEFAMKRMLASWKVAIYQICPVFRDNEVGS-RHNSEFTMLEWYRPGFDLEALAAEL 134

Query: 254 ENVLRGVF 261
            ++L  V+
Sbjct: 135 SDLLTTVY 142



 Score = 57.0 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 3/102 (2%)

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
             +  ++ ++  +  A +++L  NG EIA+          +   F      +        
Sbjct: 223 AALAKVETDEQGNEVAKRFELYINGIEIANAYDELADGAALQARFEADNEERARRGLPIM 282

Query: 524 GLYRAFQCGM---PPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +           P   GIA GIDR++M++ GAK++ EV  F
Sbjct: 283 PIDERLVAACDHLPACSGIALGIDRLLMVVTGAKSIDEVIGF 324


>gi|329114963|ref|ZP_08243718.1| Putative protein YjeA [Acetobacter pomorum DM001]
 gi|326695406|gb|EGE47092.1| Putative protein YjeA [Acetobacter pomorum DM001]
          Length = 341

 Score = 67.4 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 55/151 (36%), Gaps = 9/151 (5%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS--FYALPQAPQ 199
           +R  +    R  + +   +E  TP    +  E    + F        G      L  +P+
Sbjct: 28  RRNLVWRGTRAFLESRGCVEVETPYAVPTPGEEVHLQPFHTVRETPDGMQQNLFLHTSPE 87

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + ++A+     FQ A  +R+ +  S     EF  L+     +  + +++  E +L+ 
Sbjct: 88  FAMKRIVAATGLPVFQFARVWRNGE-GSYLHAPEFTMLEWYQPNMTLEGLMDETEALLQA 146

Query: 260 VFEEFSNGNTV----SNNFLRICYDDAIRRY 286
           V       +      S  F R+   +A  R+
Sbjct: 147 VLPPILQHSDHSLSISGPFERLTMQEAFHRH 177



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 16/126 (12%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHM--- 500
           E      +  F  + +   Q  +      D     A +++L   G E+A+          
Sbjct: 219 EPAIGRTRPTFLTH-WPASQAALARKSPQDPR--VALRFELYAAGMELANAFEELTDTTE 275

Query: 501 ------SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
                 ++   +        +  V+ +   L  A    MP   GIA G DR+VML  G  
Sbjct: 276 QRARFKADRQQRQTLYPNRPEWPVDEK---LLSALPH-MPACSGIALGFDRLVMLACGTT 331

Query: 555 NVREVS 560
            ++ V 
Sbjct: 332 RIQNVL 337


>gi|300113203|ref|YP_003759778.1| lysyl-tRNA synthetase-like protein GenX [Nitrosococcus watsonii
           C-113]
 gi|299539140|gb|ADJ27457.1| lysyl-tRNA synthetase-related protein GenX [Nitrosococcus watsonii
           C-113]
          Length = 332

 Score = 67.4 bits (163), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 57/134 (42%), Gaps = 7/134 (5%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL-TASSPEGARDFLVPSRVN----- 187
           R     K +  R R++ ++R        +E  TPIL TA++       LV +        
Sbjct: 9   RPRVDKKVLEARARLLANIRHFFARRGVLEVETPILSTAAATAPHLHSLVTAYQGPQAPK 68

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           +G    L  +P+   + L+A+G    +Q+A  FR+ +    R   EF  L+      +  
Sbjct: 69  EGQQLFLQTSPEHAMKRLLAAGSGPIYQVARVFRNGE-NGRRHNPEFTLLEWYRPGFDHL 127

Query: 248 DILNTMENVLRGVF 261
            ++  ++++L  + 
Sbjct: 128 ALMAEVDSLLSLLL 141



 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 4/93 (4%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
            A ++++   G E+A+G      +    Q F    I +             L  A + G+
Sbjct: 239 LAERFEVYLKGMELANGYHELCDAVEQRQRFEADLIQRRRRGLSEVPLDEFLLAALEQGL 298

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           P   G+A G+DR++ML L +  + EV  FP+ +
Sbjct: 299 PECAGVALGVDRLLMLQLNSARIEEVLAFPLMR 331


>gi|320354733|ref|YP_004196072.1| lysyl-tRNA synthetase-like protein GenX [Desulfobulbus propionicus
           DSM 2032]
 gi|320123235|gb|ADW18781.1| lysyl-tRNA synthetase-related protein GenX [Desulfobulbus
           propionicus DSM 2032]
          Length = 305

 Score = 67.0 bits (162), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 8/120 (6%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQGSFYALPQAPQQY 201
            +R+ ++ ++R   +   ++E  TP+ L    PE           ++G F  L  +P+  
Sbjct: 8   RQRSFLLQAIRSFFLERAYLEVDTPLRLPVLLPESNIVPF----NSEGCF--LHTSPELC 61

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+A G  + FQI  CFR E+        EF  L+   +  +  D++   E ++  V 
Sbjct: 62  MKRLLARGCSQIFQICHCFRKEEHGRLHQ-SEFTMLEWYHTGWDYVDLMQECEELVCFVM 120



 Score = 47.0 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 31/90 (34%), Gaps = 10/90 (11%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS------NVGISKEVVENRFGGLYRAFQCG 532
           A +++L   G E+A+G       E     F+      +       +   F          
Sbjct: 215 AERFELYVAGIELANGFSELIDPEEQRSRFAAEIDAIHSQGRTASMPENFLADLSRV--- 271

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            P   GIA G+DR+ MLL     +     F
Sbjct: 272 -PETAGIALGVDRLFMLLTERDILSAAMPF 300


>gi|92114648|ref|YP_574576.1| tRNA synthetase, class II (D, K and N) [Chromohalobacter salexigens
           DSM 3043]
 gi|91797738|gb|ABE59877.1| tRNA synthetase, class II (D, K and N) [Chromohalobacter salexigens
           DSM 3043]
          Length = 324

 Score = 67.0 bits (162), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 4/120 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGA---RDFLVPSRVNQGSFYALPQAPQQY 201
           R R++  +R      + +E  TP+L       A      L  +         L  +P+ +
Sbjct: 17  RARLLARVRAFFAERDVLEVETPVLGHGGSTDAHLDSLALTATTPQGRERLWLQTSPEFH 76

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+A+G    FQ+A  FRD +    R   EF  L+     V  D+++   + ++R V 
Sbjct: 77  MKRLLAAGSGPVFQLARSFRDGEVG-RRHNLEFTMLEWYRPGVTLDELIAEGDALIRHVL 135



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 4/97 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE----NRFGGL 525
           +  +     A ++++   G E+A+G      +      F      ++ +     +    L
Sbjct: 223 RDPEDGVEVAARFEIYLGGLELANGYDELTDAAEQAARFETDNRQRQALGKPHVDIDRHL 282

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             A   GMP   G+A G+DR++ L LG ++V EV  F
Sbjct: 283 LAALTAGMPSGSGVALGMDRLIQLALGKESVAEVMAF 319


>gi|20269119|emb|CAC81816.1| putative asparaginyl-tRNA synthetase [Solanum lycopersicum]
          Length = 123

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 29/72 (40%)

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
              A      +   P FR E   + R   EF+ ++ E++F +  D +N  E  ++ + + 
Sbjct: 7   ETYACALSSVYTFGPTFRAEQSHTTRHLAEFWMVEPEIAFADIQDDMNCAEAYVKFLCQW 66

Query: 264 FSNGNTVSNNFL 275
             +       F+
Sbjct: 67  LLDHCLDDMEFM 78


>gi|254516089|ref|ZP_05128149.1| lysyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219675811|gb|EED32177.1| lysyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 318

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 74/218 (33%), Gaps = 15/218 (6%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLV--PSRVNQ 188
           D R       +  R  I   +R        +E  TP+L+     + A + L   PS+   
Sbjct: 3   DWRPGATRAALQARGEIFARIRQFFADRQVLEVDTPVLSRFGVTDPAIEPLRLAPSQAQP 62

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            S + L  +P+   + L+A+G    +Q+   FRD +  +   P EF  L+        + 
Sbjct: 63  SSMF-LQSSPEFAMKRLLAAGSGPIYQLGKAFRDGEIGARHNP-EFTLLEWYRPGFGLEQ 120

Query: 249 ILNTMENVLRGVF-EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307
           ++  +  ++      +  +  +    F  I   D      +   ++    +  +V E  +
Sbjct: 121 LIQEVGELVCECLGRDAWDVMSYQALFQEILGVDPWTVTASQLQEVAAQHL--DVGELEL 178

Query: 308 HSEFR-------VFSKILSVNPGYEVWAIPAKGGGGNR 338
             +         V   +L+      V   P       R
Sbjct: 179 DYDGWLDLLMSHVLEPVLASRGLQFVCDYPPSQAALAR 216



 Score = 50.5 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 4/92 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS----NVGISKEVVENRFGGLYRAFQ 530
             + A +++L  +G E+A+G      ++ ++   +       +S +        L  A Q
Sbjct: 222 GRVVAQRFELYVDGIELANGYAELLDAKELIARAASDNTLRKLSGQEPRALDSRLVAAMQ 281

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            G+P   G+A G+DR++M  LGA  +  V  F
Sbjct: 282 EGLPDCSGVALGVDRLLMAKLGADRLSAVMPF 313


>gi|169842655|ref|ZP_02875760.1| lysyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 60

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/54 (38%), Positives = 31/54 (57%)

Query: 508 FSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           +  V + + V E       RA + GMPP GG+  GIDR+VML   + ++R+V L
Sbjct: 3   WRRVTMKEAVKEATGFDYIRALEYGMPPAGGLGIGIDRLVMLQTNSASIRDVML 56


>gi|159040656|ref|YP_001539908.1| asparagine synthetase A [Caldivirga maquilingensis IC-167]
 gi|157919491|gb|ABW00918.1| tRNA synthetase class II (D K and N) [Caldivirga maquilingensis
           IC-167]
          Length = 348

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 16/155 (10%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
            +  I++++R  + ++ F E   PI+   +  G R     +    G  Y +  +   YKQ
Sbjct: 47  IQASILHAIREYLDSQGFTEVLPPIIGPVTDPGIRGAKQATVDFYGHEYKVMSSAILYKQ 106

Query: 204 LLMASGFDRYFQIAPCFRDEDPR---SDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
             MA+   + + ++P  R E      + R   EF+Q+D+E+     DD +N  E +   V
Sbjct: 107 -YMAAVLGKVYFVSPNIRFEPNDSVFTGRHLVEFFQVDLEILNGTLDDAMNVAEGLFMYV 165

Query: 261 FEEFSNGN------------TVSNNFLRICYDDAI 283
                + +                 F R  + +A+
Sbjct: 166 TRYIRDVHGKDLEKMGRELPHYKTPFTRYTHAEAV 200



 Score = 38.5 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 49/157 (31%), Gaps = 26/157 (16%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN-----PFTMPQGGMESLKGN 472
             +  +LG  N    E  W           E +K+  AH+      +  P+G        
Sbjct: 200 VELVNKLGCSNPRNTEILW-----------ECEKVLSAHHDSPLFIYEYPKGSRGFYNRE 248

Query: 473 DLLSIKAFQ-YDLVCN---GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
           D       + +D++     G  I+ G       +V+ +             N++      
Sbjct: 249 DPGKPGYLRDFDMLYPEGFGEAISGGEREYEPVKVISRIREA-----GEDPNKYRWFLEM 303

Query: 529 FQCGMP-PHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            +   P    G   G++R    + G + V E   +P 
Sbjct: 304 LKDFYPLKTAGFGIGVERFTRYICGLRAVWEARPYPK 340


>gi|88705248|ref|ZP_01102959.1| lysyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88700338|gb|EAQ97446.1| lysyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 318

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 29/147 (19%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPIL---------------TASSPEG 176
           D R       +  R+R++ ++R        +E  TPIL                AS+PEG
Sbjct: 3   DWRSGASLAALQARSRLLGNIRAFFAQRQVLEVDTPILARFGVTDPAIEPLRSVASAPEG 62

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
           A  F             L  +P+   + L+A+G    +Q+   FR  +  +   P EF  
Sbjct: 63  ASMF-------------LQSSPEFAMKRLLAAGSGPIYQLGKAFRHGEVGARHNP-EFTL 108

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEE 263
           L+     +   +++  +  ++    + 
Sbjct: 109 LEWYRPGLPAKELIREVAELVCECLDR 135



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 4/88 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EVVENRFGGLYRAFQCGMP 534
           A +++L  +G E+A+G         + Q  +     +    +        L  A + G+P
Sbjct: 226 AERFELYVDGIELANGYQELLDVWELEQRAAQDNERRRAGGQEERALDSRLVAAMKEGLP 285

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           P  G+A G+DR++M  LG   +  V  F
Sbjct: 286 PCSGVALGVDRLLMAQLGVDRLSAVMPF 313


>gi|119505507|ref|ZP_01627579.1| Truncated, possibly inactive, lysyl-tRNA synthetase (class II)
           [marine gamma proteobacterium HTCC2080]
 gi|119458616|gb|EAW39719.1| Truncated, possibly inactive, lysyl-tRNA synthetase (class II)
           [marine gamma proteobacterium HTCC2080]
          Length = 316

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 4/133 (3%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGS 190
           D R    +    +R  ++  +R        +E  TP+L  +   + A +        +  
Sbjct: 3   DWRPGANNAIQRQRAALLADLRNYFAQRRVMEVETPLLCRAGVSDPALENFEVPSGQEMR 62

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           F  L  +P+   + L+A+G    FQI   FR E+      P E+  L+      +   + 
Sbjct: 63  F--LQTSPEYAMKRLLAAGSGDIFQICKAFRREEQGVRHNP-EYTLLEWYRLGFDHYQLA 119

Query: 251 NTMENVLRGVFEE 263
             +  ++  V E 
Sbjct: 120 REVGELVAAVLER 132



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 54/139 (38%), Gaps = 27/139 (19%)

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
           + +   +I+D+P                     Q  +     +    +   +++   +G 
Sbjct: 194 SGWGIVFIVDYP-------------------PSQAALARQILDASGELHGARFECYVDGI 234

Query: 490 EIASGGIRNHMSEVMLQAFSNVGI------SKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           E+A+G      +  +   F++  +        E + + +  L  A   G+P   G+A G+
Sbjct: 235 ELANGYWECGDAAELRARFTSDNLLRRTRGQPERIADEY--LLEALTAGLPACAGVALGV 292

Query: 544 DRIVMLLLGAKNVREVSLF 562
           DR++ L  GAKN+  V  F
Sbjct: 293 DRLLALKSGAKNLDAVLSF 311


>gi|255576044|ref|XP_002528917.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223531619|gb|EEF33446.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 187

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 4/132 (3%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           DF    + +  + +  A+  F  P+     ++ ND     A    LV    E+  G  R 
Sbjct: 59  DFVQLTYTDAIELLLKANKKFEFPEIKAFYMRQNDDGKTVAAMDMLVPRIGELIGGSQRE 118

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
              E + +   ++ ++K    + +       + G  PH G   G +R+V    G  N+R+
Sbjct: 119 ERLEYLEERLDDLKLNK----DSYWWYLDLRRYGSVPHAGFGLGFERLVQFATGIDNIRD 174

Query: 559 VSLFPMSQNFCD 570
              FP +    +
Sbjct: 175 AIPFPRAPGSAE 186


>gi|319787331|ref|YP_004146806.1| lysyl-tRNA synthetase-related protein GenX [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465843|gb|ADV27575.1| lysyl-tRNA synthetase-related protein GenX [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 325

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 43/122 (35%), Gaps = 6/122 (4%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPIL-----TASSPEGARDFLVPSRVNQGSFYALPQA 197
             R R+   +R        +E  TPIL     T  + E         R        L  +
Sbjct: 16  RLRARLYALVRAFFAEREVLEVETPILLEAGNTEPNIESFSTRFTGHRSAGAEVRWLRTS 75

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+   + L+A+G    +++   FR+ +      P EF  L+      +   + +    ++
Sbjct: 76  PEYPLKRLVAAGIGDCYELGRVFRNGEAGGRHNP-EFSMLEWYRVGWDHLRLADETVELV 134

Query: 258 RG 259
           R 
Sbjct: 135 RA 136



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 14/165 (8%)

Query: 405 DPLKFCSFAADARNH-IAQELGIINCNCFEFCWIMDF--PFYEWNEEEKKIDFAHNPFTM 461
           DP +       AR   +A +   +N + +    +     P +  +    +I   H+ +  
Sbjct: 163 DPFQASEAELRARLDGVAIDPEGLNRDDWLDLLMTHRIQPSFAPD----RITVVHD-WPA 217

Query: 462 PQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK----EV 517
            Q  +  ++  D     A +++L     E+A+G      +      F   G  +     V
Sbjct: 218 SQCALARIRAGDPP--VAERFELYLGPLELANGYHELTEATEQRARFERDGRVRAGRGTV 275

Query: 518 VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                  L  A Q GMP   G+A GI+R++M L     + +V  F
Sbjct: 276 QPPVDERLLAALQAGMPDCAGVALGIERLLMALAATTRIADVLAF 320


>gi|71064850|ref|YP_263577.1| putative lysyl-tRNA synthetase, class II [Psychrobacter arcticus
           273-4]
 gi|71037835|gb|AAZ18143.1| putative lysyl-tRNA synthetase, class II [Psychrobacter arcticus
           273-4]
          Length = 342

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 11/133 (8%)

Query: 136 DTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL------VPSRVNQ 188
            T+      +R ++++ +R        IE  TP+L+ +   G  D          +  ++
Sbjct: 16  PTMTLAMAQQRAQLVSVIRQFFATRQVIEVQTPLLSQA---GNTDTFLQSVSAQVTYQDK 72

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  +P+   + L+AS     +QI P FRD +  + R   EF  L+        DD
Sbjct: 73  PYTYYLHTSPEFAMKRLLASWQVPMYQICPVFRDNEIGA-RHNIEFTMLEWYQPNYSLDD 131

Query: 249 ILNTMENVLRGVF 261
           +   +  +L  ++
Sbjct: 132 MAAELGELLEMLY 144



 Score = 50.5 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 11/91 (12%)

Query: 479 AFQYDLVCNGFEIASGGIR-------NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           A +++L   G EIA+               E   Q      + +  ++            
Sbjct: 251 AKRFELYIKGIEIANAYDELADGQALRERFEQDNQLRKRHNLPQMPIDEHLLAASDDL-- 308

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              P  GIA G+DR++M++ GA  + EV  F
Sbjct: 309 --IPCSGIAVGVDRLLMVITGAIGLEEVIPF 337


>gi|90020730|ref|YP_526557.1| serine/threonine protein kinase [Saccharophagus degradans 2-40]
 gi|89950330|gb|ABD80345.1| serine/threonine protein kinase [Saccharophagus degradans 2-40]
          Length = 325

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 4/108 (3%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +K        A ++++  NG E+A+G      +    + F+     +  +
Sbjct: 214 FPACQSALAKVKVRSDGVAVARRFEVYINGVELANGYWELTDAAEQRKRFNADHARRAEL 273

Query: 519 ENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                        A + G+P   G+A G+DR++M LLGA  + +V  F
Sbjct: 274 GLSLPQIDEAFMAAIEAGLPECAGVALGVDRLLMALLGADKLSDVLPF 321



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 67/178 (37%), Gaps = 10/178 (5%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY---ALPQA 197
           N+  R+ ++ ++R        IE   P++   +      +L P  V+ G+      L  +
Sbjct: 10  NLKARSALLRAIREYFYPRAVIEVDPPVIGRHTV--TDPYLEPLTVSMGANNPVGYLQTS 67

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+ + + ++AS  +  + +   FR ++      P EF  L+      +  D+   + +++
Sbjct: 68  PEYFMKRMLASTGESMYYLGKAFRRDESGRKHSP-EFTMLEWYRPGFDDIDLRKEVLDLV 126

Query: 258 RGVFEEFSNG----NTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
             V  + +       T       I Y+D         P       +  + +  ++ ++
Sbjct: 127 GYVKNQLAEQGAVVATNDWAVSEISYEDVFNNALGVNPHTAPVAELKQIAQAKLNVDW 184


>gi|262376604|ref|ZP_06069832.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
 gi|262308314|gb|EEY89449.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
          Length = 333

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 51/126 (40%), Gaps = 4/126 (3%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQ 196
           + +  R  +   +R      + +E  TPIL+ +       A        + + + + L  
Sbjct: 21  QAMRARATLYRQIRQFFAERDVLEVETPILSQAGVTDVHLASVQAQRHVLGKLNTHYLQT 80

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+   + L+ASG    +QI   FR+++    +   EF  L+         D++  + ++
Sbjct: 81  SPEFAMKRLLASGSGPIYQICKVFRNDEHG-RKHNSEFTMLEWYRPGFSLKDLMFEVSDL 139

Query: 257 LRGVFE 262
           L    +
Sbjct: 140 LNVTLK 145



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           F      +   + ++   + A +++L   G E+A+       ++V+   F      +   
Sbjct: 222 FPPEMASLAKTRIDEDGELVAARFELYIEGLELANAYDELIDADVLRSRFEADNAERAKL 281

Query: 518 ---VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              V      L  A    MP   GIA GIDR++M+      + +V  FP
Sbjct: 282 GLHVMPIDEYLLAALPN-MPECSGIALGIDRLLMIATNQMKLEQVISFP 329


>gi|150398663|ref|YP_001329130.1| lysine--tRNA ligase [Sinorhizobium medicae WSM419]
 gi|150030178|gb|ABR62295.1| Lysine--tRNA ligase [Sinorhizobium medicae WSM419]
          Length = 350

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 5/131 (3%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS--FYAL 194
              ++ R RI +++R      +FIE  T  L  S    A    F   +    GS     L
Sbjct: 17  RPFLIGRNRIQSALRRFFDERDFIEVDTAALQVSPGNEAHLHAFATQALGLDGSVQPLYL 76

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+   + L+A+G  R    A  +R+ +  +   P EF  L+   +    + ++    
Sbjct: 77  HTSPEFACKKLIAAGERRIACFAHVYRNRERGALHHP-EFTMLEWYRAEESYETLMRDCA 135

Query: 255 NVLRGVFEEFS 265
            +L    E  +
Sbjct: 136 EILALAAETVA 146



 Score = 49.3 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 5/88 (5%)

Query: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPP 535
            +++L   G E+A+       +    + F+     K  V             A    MP 
Sbjct: 258 ERFELYACGVELANAFGELTDAAEQRRRFALEMEEKARVYGETYPIDDDFLAALS-SMPE 316

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             GIA G DR+VML  GA  + +V   P
Sbjct: 317 ASGIALGFDRLVMLATGASRIDQVLWAP 344


>gi|242007517|ref|XP_002424586.1| hypothetical protein Phum_PHUM137280 [Pediculus humanus corporis]
 gi|212508029|gb|EEB11848.1| hypothetical protein Phum_PHUM137280 [Pediculus humanus corporis]
          Length = 209

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 14/101 (13%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           R+H+CG+L    +G  + L GW+     +       ++D YG             EI   
Sbjct: 104 RSHTCGELNKYLIGKNITLCGWISS---NKFPGRAILKDGYGFV-----------EIVPE 149

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105
           ++ E +L + G+V S+     N       IE+  Q + ++ 
Sbjct: 150 LKLENILVVHGVVSSQKENNPNTKNKNENIEVLVQSLTVVH 190


>gi|325510971|gb|ADZ22607.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 65

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 30/62 (48%)

Query: 507 AFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                 + K +    F      F+ GMPPHGG+A G++RI + LL   N+RE + F   +
Sbjct: 1   MLRQSMLDKGLKVESFKSYLDVFKFGMPPHGGLAIGLERITIKLLNLDNIREAAFFVRDK 60

Query: 567 NF 568
             
Sbjct: 61  KR 62


>gi|261493892|ref|ZP_05990404.1| lysyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495158|ref|ZP_05991622.1| lysyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261309228|gb|EEY10467.1| lysyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310494|gb|EEY11685.1| lysyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 327

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 63/153 (41%), Gaps = 12/153 (7%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNE----EEKKIDFAHNPFTMPQGGMESLKGND 473
              A++ G+   +  +   ++ F F E  E    +E+     H P T  Q  +  +   D
Sbjct: 174 VEKARKHGLQCDDDEQRDTLLQFLFSEVVEANIGQERPTAVYHFPST--QAALAQISSED 231

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAF 529
                A +++    G E+ +G      ++  +  F    + +E +    +        A 
Sbjct: 232 HR--VAERFEFYYKGLELCNGFHELDDADEQIHRFEQDNLQREKMGLEPQQLDVRFLAAL 289

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           + G P   G+A G+DR++ML + A+ + EV  F
Sbjct: 290 KAGFPNCSGVALGVDRLLMLAMDAEKIEEVISF 322



 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 57/134 (42%), Gaps = 24/134 (17%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF----------- 191
           ++R++II  +R        +E  TPIL+             + V+  +F           
Sbjct: 21  IQRSKIITEIRKFFTDRGLLEVETPILSE---------FSVTDVHLSTFNTQFQSPFSPE 71

Query: 192 ---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
                L  +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   
Sbjct: 72  AKTLHLMTSPEYHMKRLLAAGSGPIFQLCKVFRNEEAGKRHNP-EFTMLEWYRPHFDMYR 130

Query: 249 ILNTMENVLRGVFE 262
           ++N ++++L+ + +
Sbjct: 131 LINEVDDLLQQILD 144


>gi|221501877|gb|EEE27630.1| aspartyl/lysyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 1170

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 57/165 (34%), Gaps = 36/165 (21%)

Query: 438  MDFPFYEWNEE--EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            MDF F EW E    +     H P  +     E L       + A +++    G E+A G 
Sbjct: 1005 MDFTFKEWVESRLTQPTHIIHTPLALSPLAAEKLPEEGKFPV-AERFETYIAGMELADGY 1063

Query: 496  IRNHMSEVMLQAFS---------------------------NVGISKEVVENRFGG---- 524
                     L+ F                            N   ++   E +  G    
Sbjct: 1064 SELTDPLEQLRRFHSQQRIAKGTDTPATGPGRTTPETLEANNQAEARSQEEAKADGAVPN 1123

Query: 525  --LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                 A   G+PP  G+  G+DR+VMLL  +  +R+V   P+ ++
Sbjct: 1124 QEFVSALMLGLPPTAGLGIGLDRLVMLLTDSAFIRDVVHMPLRKS 1168



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 3/90 (3%)

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFY 235
           AR F           + L  AP+   + L+ SG  D+ F+I  CFR+E   S R   EF 
Sbjct: 743 ARLFESHLHALDLPVH-LRIAPELALKRLVVSGVSDKVFEIGRCFRNEGI-SWRHQPEFL 800

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
            ++   +F   +D++   E ++R      +
Sbjct: 801 SMEAYATFWTYEDMMTLTEEIVRLCACRIA 830


>gi|221481145|gb|EEE19550.1| lysyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 1170

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 57/165 (34%), Gaps = 36/165 (21%)

Query: 438  MDFPFYEWNEE--EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            MDF F EW E    +     H P  +     E L       + A +++    G E+A G 
Sbjct: 1005 MDFTFKEWVESRLTQPTHIIHTPLALSPLAAEKLPEEGKFPV-AERFETYIAGMELADGY 1063

Query: 496  IRNHMSEVMLQAFS---------------------------NVGISKEVVENRFGG---- 524
                     L+ F                            N   ++   E +  G    
Sbjct: 1064 SELTDPLEQLRRFHSQQRIAKGTDTPATGPGRTTPETLEANNQAEARSQEEAKADGAVPN 1123

Query: 525  --LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                 A   G+PP  G+  G+DR+VMLL  +  +R+V   P+ ++
Sbjct: 1124 QEFVSALMLGLPPTAGLGIGLDRLVMLLTDSAFIRDVVHMPLRKS 1168



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 3/90 (3%)

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFY 235
           AR F           + L  AP+   + L+ SG  D+ F+I  CFR+E   S R   EF 
Sbjct: 743 ARLFESHLHALDLPVH-LRIAPELALKRLVVSGVSDKVFEIGRCFRNEGI-SWRHQPEFL 800

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
            ++   +F   +D++   E ++R      +
Sbjct: 801 SMEAYATFWTYEDMMTLTEEIVRLCACRIA 830


>gi|237844525|ref|XP_002371560.1| lysyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211969224|gb|EEB04420.1| lysyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 1170

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 57/165 (34%), Gaps = 36/165 (21%)

Query: 438  MDFPFYEWNEE--EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            MDF F EW E    +     H P  +     E L       + A +++    G E+A G 
Sbjct: 1005 MDFTFKEWVESRLTQPTHIIHTPLALSPLAAEKLPEEGKFPV-AERFETYIAGMELADGY 1063

Query: 496  IRNHMSEVMLQAFS---------------------------NVGISKEVVENRFGG---- 524
                     L+ F                            N   ++   E +  G    
Sbjct: 1064 SELTDPLEQLRRFHSQQRIAKGTDTPATGPGRTTPETLEANNQAEARSQEEAKADGAVPN 1123

Query: 525  --LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                 A   G+PP  G+  G+DR+VMLL  +  +R+V   P+ ++
Sbjct: 1124 QEFVSALMLGLPPTAGLGIGLDRLVMLLTDSAFIRDVVHMPLRKS 1168



 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 3/90 (3%)

Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFY 235
           AR F           + L  AP+   + L+ SG  D+ F+I  CFR+E   S R   EF 
Sbjct: 743 ARLFESHLHALDLPVH-LRIAPELALKRLVVSGVSDKVFEIGRCFRNEGI-SWRHQPEFL 800

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
            ++   +F   +D++   E ++R      +
Sbjct: 801 SMEAYATFWTYEDMMTLTEEIVRLCACRIA 830


>gi|115524935|ref|YP_781846.1| tRNA synthetase, class II (D, K and N) [Rhodopseudomonas palustris
           BisA53]
 gi|115518882|gb|ABJ06866.1| tRNA synthetase, class II (D, K and N) [Rhodopseudomonas palustris
           BisA53]
          Length = 350

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 51/139 (36%), Gaps = 12/139 (8%)

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R LD RR  L      R+ I  ++R   + E FIE  T +L AS P        P     
Sbjct: 15  RHLD-RRPFLRA----RSEITRAVREWFVHEGFIEVETGVLQAS-PGNETHLHAPRTELH 68

Query: 189 GSF-----YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                        +P+   + L+A+G  R  + A  FRD + R D    EF  L+   + 
Sbjct: 69  PPDGPVLTRYFRTSPEFACKKLLAAGESRIVEFAKVFRDRE-RGDLHLPEFTMLEWYRAN 127

Query: 244 VEQDDILNTMENVLRGVFE 262
                ++     V+     
Sbjct: 128 APYQAVMTDCVAVIVEAAR 146



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 6/123 (4%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E N  + ++   H+ +  P+  +  L   D     A ++++   G E+A+G      +  
Sbjct: 226 EPNLGQGRLTLLHD-YPAPEAALARLSSADPR--VAERFEVYACGVELANGFGELTDAAE 282

Query: 504 MLQAFSNVGISKEVVENRFGGLYRAFQCG---MPPHGGIAAGIDRIVMLLLGAKNVREVS 560
               F +    K+        L   F      MP   G+A G DR+VML  GA  + +V 
Sbjct: 283 QRARFEHAMAEKQRRYGERYPLDEEFLAAVGQMPEASGVALGFDRLVMLAAGATRIDQVV 342

Query: 561 LFP 563
             P
Sbjct: 343 WTP 345


>gi|220918952|ref|YP_002494256.1| tRNA synthetase class II (D K and N) [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956806|gb|ACL67190.1| tRNA synthetase class II (D K and N) [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 339

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 49/134 (36%), Gaps = 24/134 (17%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              W++D+P                        +  +K  D     A +++L   G E+A
Sbjct: 221 RPTWLVDWP-------------------ASMAALSKVKAGDPR--WAERFELYAGGLELA 259

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF--QCG-MPPHGGIAAGIDRIVML 549
           +G      +             +  +      L   F    G MP  GG+A G DR++ML
Sbjct: 260 NGFTELTDAREQRARLVEEQALRRRLGRPAYPLDERFLEAVGRMPEAGGVAVGFDRVLML 319

Query: 550 LLGAKNVREVSLFP 563
           L G  ++ +V LFP
Sbjct: 320 LTGGASIEDVLLFP 333



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 11/165 (6%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPSRVNQG--- 189
             D   +    R R+   +R  +    + E  TP L  +   E   D    + V +G   
Sbjct: 1   MSDRRREAARARARLSAEVRRILGGLGYEEVETPSLVPAPGMEPHIDAFQATFVPEGGGA 60

Query: 190 -SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
                L  +P+   + L+A GF+R FQ+A  FR+ +      P EF  L+   +  +   
Sbjct: 61  SRPLWLQNSPEYAMKRLLADGFERVFQLARVFRNGEVSRTHNP-EFTMLEFYRAGTDYRG 119

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDL 293
           ++  +E +L G                R+  +      G     L
Sbjct: 120 MMADLEALLEGAARALL-----PGGEPRVTRNGRALWLGAPFETL 159


>gi|255562160|ref|XP_002522088.1| hypothetical protein RCOM_1382360 [Ricinus communis]
 gi|223538687|gb|EEF40288.1| hypothetical protein RCOM_1382360 [Ricinus communis]
          Length = 191

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 11/95 (11%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY-----------GITQVVAN 53
           R+  CG+L V+D G  V L GWV   R HGG+ FL++RDH            G+   + +
Sbjct: 36  RSGLCGELSVNDAGKRVLLCGWVALYRVHGGLTFLNLRDHTVRRIETQSHLMGVVTTLPD 95

Query: 54  PDSACFEIAKSVRSEWVLCIDGLVMSRSAETINAN 88
                  I   +R ++V+ ++G+V SR  E++ A 
Sbjct: 96  EFPDARSIINDLRLQYVVAVEGVVQSRPFESVAAE 130


>gi|254362602|ref|ZP_04978696.1| lysine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153094210|gb|EDN75092.1| lysine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 228

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 57/134 (42%), Gaps = 24/134 (17%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF----------- 191
           ++R++II  +R        +E  TPIL+             + V+  +F           
Sbjct: 21  IQRSKIITEIRKFFTDRGLLEVETPILSE---------FSVTDVHLSTFNTQFQSPFSPE 71

Query: 192 ---YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
                L  +P+ + + L+A+G    FQ+   FR+E+      P EF  L+      +   
Sbjct: 72  AKTLHLMTSPEYHMKRLLAAGSGPIFQLCKVFRNEEAGKRHNP-EFTMLEWYRPHFDMYR 130

Query: 249 ILNTMENVLRGVFE 262
           ++N ++++L+ + +
Sbjct: 131 LINEVDDLLQQILD 144


>gi|50085733|ref|YP_047243.1| putative lysyl-tRNA synthetase (lysine--tRNA ligase)(PoxA)
           [Acinetobacter sp. ADP1]
 gi|49531709|emb|CAG69421.1| putative lysyl-tRNA synthetase (Lysine--tRNA ligase)(PoxA)
           [Acinetobacter sp. ADP1]
          Length = 329

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAPQQY 201
           R ++  ++R        +E  TPI++ +       A    +     +     L  +P+  
Sbjct: 22  RAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKALRHIEGKERTQYLQTSPEFA 81

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ASG    +Q+   FRD++    +   EF  L+      +  D+++   ++L    
Sbjct: 82  MKRLLASGSGPIYQLCKVFRDDEHG-RKHNSEFTMLEWYRPEFDLKDLMHETADLLETCL 140

Query: 262 EE 263
           ++
Sbjct: 141 KQ 142



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE-- 516
           F      +  ++ ++     A ++++   G E+A+       + ++   F    + ++  
Sbjct: 218 FPPEMASLAKVRIDEDGEEVAARFEVYIEGLELANAYDELLDANILRARFEADNLERKLQ 277

Query: 517 --VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                     L  A    MP   GIA G+DR++M+      + +V  FP
Sbjct: 278 GLAEMPLDENLLAALPH-MPACAGIALGVDRLLMIATRQLKIEQVIAFP 325


>gi|189913068|ref|YP_001964957.1| tRNA synthetase class II (D, K and N) [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|189913402|ref|YP_001964631.1| Putative lysyl-tRNA synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|167777744|gb|ABZ96044.1| tRNA synthetase class II (D, K and N) [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167781470|gb|ABZ99767.1| Putative lysyl-tRNA synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 323

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 1/120 (0%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPSRVNQGSFYALPQAPQQY 201
           + R++++ S+R  +    F+E  TP L      E   D       +      L  +P+  
Sbjct: 10  IFRSKLLQSVREILTRNEFLEVDTPTLKPIVGMEPYLDPFEVRSPSGREKGYLITSPEYS 69

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + LMA G    F+IA  +R  +  S     EF  L++    ++   + + +E  LR + 
Sbjct: 70  LKQLMAMGLSHIFEIAHTYRSGEVGSPFHTKEFLMLELYAEGMDDVVLRHFIEKFLRELI 129



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 4/92 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS-NVGISKEVVENRF---GGLYRAFQ 530
               A ++++  +G E+A+       +    + F+    + +++ +  F        A  
Sbjct: 228 EDGVAKRFEIYWDGLELANAFYELKDTNEQRERFTDEQALREKLGKEVFPIDEDFLTALG 287

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            G P   GI+ G+DR+ + L     + EVS +
Sbjct: 288 NGFPNCSGISIGLDRLALKLFRKNTLAEVSPY 319


>gi|283780177|ref|YP_003370932.1| tRNA synthetase class II (D K and N) [Pirellula staleyi DSM 6068]
 gi|283438630|gb|ADB17072.1| tRNA synthetase class II (D K and N) [Pirellula staleyi DSM 6068]
          Length = 338

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 17/160 (10%)

Query: 135 RDTLHKNIV-KRTRIINSMRCRMIAENFIECSTPILT-------ASSPEGARDFLVPSRV 186
           R T    ++ +R++++ ++R      +F+E  TP+L+          P     F  P   
Sbjct: 12  RPTASTEMIARRSQLLRTIRDFFHTRDFLEVETPLLSRDSVIDLHLDPLPVTLFKDPVAY 71

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
             G  Y L  +P+   + L+ +G    +QI   FR  +      P EF  L+        
Sbjct: 72  KAGPTYWLQTSPEFGMKRLLVTGIPAIYQITRAFRGGETGPLHNP-EFTMLEWYRVGDNY 130

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
              +         +  +F+         + + +D+A  +Y
Sbjct: 131 AQGM--------SLLADFAQQVIARGEPVVMTFDEAFVKY 162



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 7/113 (6%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  ++        A +++L  +G E+A+G      +EV+ +  +     ++  
Sbjct: 227 FPATQSALARVRETSPP--VAERFELYVDGIELANGYHELLDAEVLQKRNAIAQSQRKSE 284

Query: 519 ENRF----GGLYRAFQCGM-PPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                     L RA Q    P   G A G+DR++M++  A+++ EV  FP+ +
Sbjct: 285 GKYAPPMESELLRAMQASALPACSGTAVGVDRLLMVISQARSIDEVITFPIDR 337


>gi|332297414|ref|YP_004439336.1| Lysine--tRNA ligase [Treponema brennaborense DSM 12168]
 gi|332180517|gb|AEE16205.1| Lysine--tRNA ligase [Treponema brennaborense DSM 12168]
          Length = 348

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 15/161 (9%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ----GSFYALP 195
            +  R RI+  +R   I   ++E  TP L+    PE   +      +           L 
Sbjct: 1   MLQFRARIMQKIRTFFIERGYLELDTPALSRDLIPETCLEVFRTDYIEPWSGGTQPLYLV 60

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+ Y + ++A      FQ++ C+R+ +        EF  L+      +        E+
Sbjct: 61  PSPEIYMKKIIARHAVSVFQLSKCYRNVESTGRIHSPEFTMLEYYTMNADYAVSAAVTED 120

Query: 256 VLRGVFEE---------FSNGNTV-SNNFLRICYDDAIRRY 286
           +   +              +  +     F+R+  DDA + Y
Sbjct: 121 LFTALLPAPEPAAADGTVRDPYSPLRPPFIRLTMDDAFKAY 161



 Score = 49.7 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 53/141 (37%), Gaps = 19/141 (13%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           +  ++ D+P       +   D  H        G  S + +    +   +++L   G E+A
Sbjct: 217 KPVFLTDYPAKVPCLAKDVTDAVH--------GSPSEQDSGRTPLWKERWELYAQGIELA 268

Query: 493 SGGIRNHMSEVML-------QAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
           +        + +        +   N       ++  +  ++R F    P   G A G+DR
Sbjct: 269 NCYTEETDPDKVKAYFETEGKLKQNTARVPHAIDPDYWKIFRKF----PACSGSALGVDR 324

Query: 546 IVMLLLGAKNVREVSLFPMSQ 566
           ++ LL G  ++  V  FP+ Q
Sbjct: 325 LIALLAGCSSIDSVLPFPLEQ 345


>gi|78047225|ref|YP_363400.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|78035655|emb|CAJ23346.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 320

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 50/133 (37%), Gaps = 12/133 (9%)

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFL---VPSRV 186
           LDL        +  R R+  ++R        +E  TP+L+ +   E   +         V
Sbjct: 6   LDL------AALQLRARLNATIRDFFAERGVLEVETPVLSEAGNTEPNIESFSTRFTGHV 59

Query: 187 NQGSFYA-LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           + G+    L  +P+   + L+A+G    +++   FR+ +      P EF  L+       
Sbjct: 60  DAGAPLRWLRTSPEYPLKRLLAAGLGDCYELGRVFRNGEAGGRHNP-EFSMLEWYRVGWN 118

Query: 246 QDDILNTMENVLR 258
              +      ++R
Sbjct: 119 DRSLAQETIELVR 131



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 46/113 (40%), Gaps = 13/113 (11%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG---- 512
           + +   Q  +  ++ +D     A +++L    FE+A+G    + ++     F        
Sbjct: 209 HDWPASQCALARIRHDDPP--VAERFELYLGSFEVANGYHELNDAQEQRARFVRDNAVRA 266

Query: 513 ---ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              + +  ++ R   +        P   G+A G+DR++M L G   + +V  F
Sbjct: 267 ARGLPQLPLDERLLAVLSQL----PDCAGVAVGVDRLLMALRGTTQIADVLAF 315


>gi|240104072|ref|YP_002960381.1| asparagine synthetase A [Thermococcus gammatolerans EJ3]
 gi|239911626|gb|ACS34517.1| Asparaginyl-tRNA synthetase related protein (asnS) [Thermococcus
           gammatolerans EJ3]
          Length = 300

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 78/203 (38%), Gaps = 26/203 (12%)

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT---------ASSPEGARDFL 181
           L +    +      +TR I  +   +  + F      +L+          SS E  R   
Sbjct: 4   LQIVSRKIDPIAEVQTRAITYLTGELSRKGFRWLLPVMLSSITDPLWPEPSSEEALRPPE 63

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDM 239
           V      G    L  +   +KQ+ +A G D+ F ++P  R E   +D  R   EF QLD 
Sbjct: 64  VEVY---GEKLRLMHSMILHKQMAVAMGIDKLFVLSPNVRLESRLADDGRHAYEFTQLDF 120

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVS---------NNFLRICYDDAIRRYGTDK 290
           E++    DD++  +E ++ G+F E       S           F R   ++ +  +G+++
Sbjct: 121 EIARASMDDVMGLIEELIVGLFRELRPFVWESFERELPKPRRPFKRFTLEEILEEFGSEE 180

Query: 291 P---DLRNPIIMHNVTEHFVHSE 310
               ++  P  +  +   F   E
Sbjct: 181 EASREMGEPFWITGIPREFYDRE 203



 Score = 45.8 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 15/129 (11%)

Query: 442 FYEWNEEEKKIDFAHNPF--TMPQGGMESLKGNDLLSIKAFQYDLVCN---GFEIASGGI 496
             E+  EE+       PF  T         + +         YDL      G   + G  
Sbjct: 173 LEEFGSEEEASREMGEPFWITGIPREFYDREVD----GIWRNYDLYLPEGYGEVSSGGER 228

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP-PHGGIAAGIDRIVMLLLGAKN 555
                +++ +  S       + E  F       + G+  P  G   G++R++  ++GAK+
Sbjct: 229 EWEYEKILAKIRSA-----GLSEEAFRPYLEVAKAGLLRPSAGAGIGVERLIRYIVGAKH 283

Query: 556 VREVSLFPM 564
           + EV  FP 
Sbjct: 284 IAEVQPFPR 292


>gi|262368648|ref|ZP_06061977.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262316326|gb|EEY97364.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 336

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQ 196
           K +  R ++ + +R        +E  TPIL+ +       A          +   + L  
Sbjct: 24  KAMRARAQMYSQIRQFFAEREVLEVETPILSQAGVTDVHLASVQAQRHVQGKQQTHYLQT 83

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+   + L+ASG    +QI   FRD++    +   EF  L+         D++  + ++
Sbjct: 84  SPEFAMKRLLASGSGPIYQICKVFRDDEHG-RKHNSEFTMLEWYRPNFSLKDLMFEVTDL 142

Query: 257 L 257
           L
Sbjct: 143 L 143



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           F      +   K ++     A +++L   G E+A+       +EV+   F      +E  
Sbjct: 225 FPPELASLAKTKTDEDGEWVAARFELYIEGLELANAYDELIDAEVLRSRFEADNAEREKL 284

Query: 518 ---VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              V      L  A    M    GIA G+DR++M+      + +V  FP
Sbjct: 285 GLHVMPIDEFLLAALPQ-MTACAGIALGVDRLLMIATEQMQLEKVITFP 332


>gi|225468612|ref|XP_002264582.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 613

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 7/151 (4%)

Query: 37  IFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIEL 96
           +FL I D   +  +    +S      + + +   +  +G++     E  +A      IEL
Sbjct: 119 VFLQISDGSCVASLKVVVESTIASPGQIMPTGTCILAEGVLKLPPVEGKHA------IEL 172

Query: 97  SAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM 156
            A+KI  +   +    P+  +R   +S+R  +     R  T+   +  R  + ++     
Sbjct: 173 QAEKILHIGTVDREKYPLSKKRLPIDSLR-DFSHFKPRTTTVASVMRMRDALTHATHNFF 231

Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVN 187
               F+    PI+T +  EG  +  + + + 
Sbjct: 232 RNNEFLYVQVPIITTTDAEGFSERFIVTTLL 262



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 190 SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F++         +      A      +   P FR E   S +   E + +++EM+F + 
Sbjct: 349 DFFSRETYLTVSGRLHLQSYACSLGNVYSFGPRFRAE---SMKHVAEMWMVELEMAFSQL 405

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNF 274
           +D +   E+ L+ + +          NF
Sbjct: 406 EDAMTCAEDFLKFLCKSVLENCVGEINF 433



 Score = 44.3 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 33/109 (30%), Gaps = 14/109 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCN-GFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           PF M                    +D+V      +  G        ++      +GI  E
Sbjct: 512 PFYMRVNDDGETVA---------AFDVVVPKAGTLIRGSQNEERMNMLSTRIKELGIRSE 562

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             E          + G   + G +   + +V+   G  NV +V  FP S
Sbjct: 563 EYE----WYMDLRRHGTVKNSGFSVAFEHVVLFATGLVNVADVIPFPRS 607


>gi|226952460|ref|ZP_03822924.1| lysyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226836782|gb|EEH69165.1| lysyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 328

 Score = 65.9 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 4/120 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAPQQY 201
           R  +   +R      N +E  TPIL+ +       A   +      + +   L  +P+  
Sbjct: 21  RAEMYKKIRQFFAERNVLEVETPILSQAGVTDVHLASVQVQRHIHGKLNTQYLQTSPEFP 80

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ASG    +QI   FRD++    +   EF  L+     ++   +++   ++L    
Sbjct: 81  MKRLLASGSGPIYQICKVFRDDEHG-RKHNSEFTMLEWYRPAMDLTALMHETADLLESCL 139



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           F      +  +K ++   + A ++++   G E+A+       ++V+   F      +   
Sbjct: 217 FPPEMASLAKVKQDEDGELVAARFEVYIEGLELANAYDELLDADVLASRFEADNRQRAEQ 276

Query: 518 ---VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              V      L  A    MP   GIA GIDR++M+++   N+ +V  FP
Sbjct: 277 GLPVIPTDQYLLAALPN-MPECSGIALGIDRLLMVVMNQVNIDKVIAFP 324


>gi|294649748|ref|ZP_06727153.1| lysine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824357|gb|EFF83155.1| lysine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 328

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 4/120 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAPQQY 201
           R  +   +R      N +E  TPIL+ +       A   +      + +   L  +P+  
Sbjct: 21  RAEMYKKIRHFFAERNVLEVETPILSQAGVTDVHLASVQVQRHIHGKLNTQYLQTSPEFP 80

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ASG    +QI   FRD++    +   EF  L+     ++   +++   ++L    
Sbjct: 81  MKRLLASGSGPIYQICKVFRDDEHG-RKHNSEFTMLEWYRPAMDLTALMHETADLLESCL 139



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           F      +  +K ++   + A ++++   G E+A+       ++V+   F      +   
Sbjct: 217 FPPEMASLAKVKQDEDGELVAARFEVYIEGLELANAYDELLDADVLASRFEADNRQRAEQ 276

Query: 518 ---VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              V      L  A    MP   GIA GIDR++M+++   N+ +V  FP
Sbjct: 277 GLPVIPTDQYLLAALPN-MPECSGIALGIDRLLMVVMNQVNIDKVIAFP 324


>gi|262372005|ref|ZP_06065284.1| conserved hypothetical protein [Acinetobacter junii SH205]
 gi|262312030|gb|EEY93115.1| conserved hypothetical protein [Acinetobacter junii SH205]
          Length = 336

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 4/120 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAPQQY 201
           R  + N +R      N +E  TP+L+ +       A   +      + +   L  +P+  
Sbjct: 29  RAEMYNKIRQFFAERNVLEVETPVLSQAGVTDVHLASVQVQRHIHGKLNTQYLQTSPEFP 88

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ASG    FQI   FRD++    +   EF  L+     ++   +++   ++L    
Sbjct: 89  MKRLLASGSGPIFQICKVFRDDEHG-RKHNSEFTMLEWYRPAMDLKALMHETADLLETCL 147



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE-- 516
           F      +  +K ++     A ++++   G E+A+       +EV+   F      +   
Sbjct: 225 FPPEMASLAKVKQDEDGECVAARFEVYIEGLELANAYDELLDAEVLAARFEADNQERALQ 284

Query: 517 --VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              V      L  A    MP   GIA GIDR++M+++    + +V  FP
Sbjct: 285 GLPVIPTDQYLLSALPH-MPECSGIALGIDRLLMVVMNKMKIDQVIAFP 332


>gi|254172931|ref|ZP_04879605.1| asparagine synthetase A [Thermococcus sp. AM4]
 gi|214033087|gb|EEB73915.1| asparagine synthetase A [Thermococcus sp. AM4]
          Length = 300

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 74/200 (37%), Gaps = 20/200 (10%)

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA------SSPEGARDFLVPS 184
           L +    L      +TR +  +   +  + F      +L++        P        P 
Sbjct: 4   LQIVSRKLDPIAEVQTRAVAYLTGELSKKGFRWLLPIVLSSITDPLWPDPAAEEALRPPE 63

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDMEMS 242
               G    L  +   +KQ+ +A G D+ F ++P  R E   +D  R   EF QLDME++
Sbjct: 64  VEVYGERLRLTHSMILHKQMAVAMGIDKLFVLSPNIRLEGKEADDGRHAYEFTQLDMEIA 123

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGNT---------VSNNFLRICYDDAIRRYGTDKP-- 291
               DD++  +E ++ G+F E                   F R   ++    +G+++   
Sbjct: 124 HASMDDVMGLIEELIVGLFRELRPVVWESFERELPKPKRPFKRFTIEEIREEFGSEEEAS 183

Query: 292 -DLRNPIIMHNVTEHFVHSE 310
             L  P  +  +   F   E
Sbjct: 184 RALEEPFWITGIPREFYDRE 203



 Score = 46.6 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 15/127 (11%)

Query: 444 EWNEEEKKIDFAHNPF--TMPQGGMESLKGNDLLSIKAFQYDLVCN---GFEIASGGIRN 498
           E+  EE+       PF  T         + +         YDL      G   + G    
Sbjct: 175 EFGSEEEASRALEEPFWITGIPREFYDREVDGTWR----NYDLYLPEGYGEVSSGGEREW 230

Query: 499 HMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMP-PHGGIAAGIDRIVMLLLGAKNVR 557
              +++ +  S       + E  F       + G+  P  G   GI+R++  ++GA+++ 
Sbjct: 231 EYEKILAKIRSA-----GLSEEAFRPYLEVAKAGLLRPSAGAGIGIERLIRYIVGAEHIA 285

Query: 558 EVSLFPM 564
           EV  FP 
Sbjct: 286 EVQPFPR 292


>gi|290475153|ref|YP_003468039.1| putative Lysine--tRNA ligase [Xenorhabdus bovienii SS-2004]
 gi|289174472|emb|CBJ81266.1| putative Lysine--tRNA ligase [Xenorhabdus bovienii SS-2004]
          Length = 295

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 13/115 (11%)

Query: 146 TRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR---VNQGSFYALPQAPQQYK 202
             +I  +R  + ++ FIE  TP++   S + +R  L       + + S +AL    Q Y 
Sbjct: 10  AAMIRRIRTFLDSQKFIEIMTPVMRRYSGDDSRPRLSLHNGGWLRESSAFALRYNLQFY- 68

Query: 203 QLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
                   DR ++I P FR +    D    EF  LD+       D++L   ++++
Sbjct: 69  --------DRIYEIGPSFRPDTVD-DTHLPEFTMLDLYKKDSTLDEMLQLAQSII 114



 Score = 39.3 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 37/126 (29%), Gaps = 26/126 (20%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           + DFP       +K+                             +++++ +G EI  G  
Sbjct: 187 VTDFPLLTEIRAKKRTG---------------------TKGIVERFEILIDGIEIVHGYT 225

Query: 497 RNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                E          +     E     +    +   P   G A GI+R+  + LG K +
Sbjct: 226 DEDDVERFETQARKRNMFGSEDEVMCTMMRN--KLVSPSSAGFAIGIERLCQVALGEKQI 283

Query: 557 REVSLF 562
              S F
Sbjct: 284 ---SAF 286


>gi|147845769|emb|CAN82202.1| hypothetical protein VITISV_011129 [Vitis vinifera]
          Length = 597

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 7/151 (4%)

Query: 37  IFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIEL 96
           +FL I D   +  +    +S      + + +   +  +G++     E  +A      IEL
Sbjct: 103 VFLQISDGSCVASLKVVVESTIASPGQIMPTGTCILAEGVLKLPPVEGKHA------IEL 156

Query: 97  SAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRM 156
            A+KI  +   +    P+  +R   +S+R  +     R  T+   +  R  + ++     
Sbjct: 157 QAEKILHIGTVDREKYPLSKKRLPIDSLR-DFSHFKPRTTTVASVMRMRDALTHATHNFF 215

Query: 157 IAENFIECSTPILTASSPEGARDFLVPSRVN 187
               F+    PI+T +  EG  +  + + + 
Sbjct: 216 RNNEFLYVQVPIITTTDAEGFSERFIVTTLL 246



 Score = 48.9 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 190 SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F++         +      A      +   P FR E   S +   E + +++EM+F + 
Sbjct: 333 DFFSRETYLTVSGRLHLQSYACSLGNVYSFGPRFRAE---SMKHVAEMWMVELEMAFSQL 389

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNF 274
           +D +   E+ L+ + +          NF
Sbjct: 390 EDAMTCAEDFLKFLCKSVLENCVGEINF 417



 Score = 44.3 bits (103), Expect = 0.059,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 33/109 (30%), Gaps = 14/109 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCN-GFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           PF M                    +D+V      +  G        ++      +GI  E
Sbjct: 496 PFYMRVNDDGETVA---------AFDVVVPKAGTLIRGSQNEERMNMLSTRIKELGIRSE 546

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             E          + G   + G +   + +V+   G  NV +V  FP S
Sbjct: 547 EYE----WYMDLRRHGTVKNSGFSVAFEHVVLFATGLVNVADVIPFPRS 591


>gi|83648057|ref|YP_436492.1| hypothetical protein HCH_05398 [Hahella chejuensis KCTC 2396]
 gi|83636100|gb|ABC32067.1| Truncated, possibly inactive, lysyl-tRNA synthetase (class II)
           [Hahella chejuensis KCTC 2396]
          Length = 318

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 10/150 (6%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDF----LVPSRVN 187
           D R       + KR   +  +R    A   +E  TP+L++ +   A D           +
Sbjct: 5   DWRPSAAIDTLRKRADFVKRIRAFFDARQVLEVDTPLLSSVT---ATDLNLDSFDVISAD 61

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
               Y L  +P+   + L+A+G    +QI   FR  +  +   P EF  L+         
Sbjct: 62  SEPRY-LLTSPEHAMKRLLAAGSGPIYQITRAFRRGEIGARHNP-EFAMLEWYRPGFSLQ 119

Query: 248 DILNTMENVLRGV-FEEFSNGNTVSNNFLR 276
           D+   +E +L  + +EE +   +    F R
Sbjct: 120 DLQREVEELLASLGYEEKAECMSYREAFQR 149



 Score = 60.9 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 5/108 (4%)

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           Q  +  +  +      AF+++L  NG EIA+            + F    I++   +   
Sbjct: 211 QAALARVGEDAEGDAVAFRFELYINGVEIANAYDELIDPVEQRRRFEEDNIARSAAKKPV 270

Query: 523 ----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                 L  A    MP   GIA G+DR+ M+L G   + +V  FP  +
Sbjct: 271 IPVDERLLAALPY-MPESSGIALGVDRLFMVLEGKSRLEDVLGFPADR 317


>gi|92117824|ref|YP_577553.1| lysine--tRNA ligase [Nitrobacter hamburgensis X14]
 gi|91800718|gb|ABE63093.1| Lysine--tRNA ligase [Nitrobacter hamburgensis X14]
          Length = 345

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 51/144 (35%), Gaps = 12/144 (8%)

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
              + R  D         +  R  +  ++R    A+ F+E  T +L AS P        P
Sbjct: 7   WWDRARHAD-----RRAFLQARVAVTRALRAWFDAQGFVEVETGVLQAS-PGNETHLHAP 60

Query: 184 SR-----VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
                          L  +P+   + L+A+G  +  + A  FRD + R D    EF  L+
Sbjct: 61  RTTLTSPAGDQVTRYLRTSPEFACKKLLAAGEQKVVEFARVFRDRE-RGDLHLAEFTMLE 119

Query: 239 MEMSFVEQDDILNTMENVLRGVFE 262
              +    D I+     V+    +
Sbjct: 120 WYRAGRSYDVIMADCIAVIARAAK 143



 Score = 48.9 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 24/212 (11%)

Query: 362 RLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDG-DSCFFIAGDPLKFCSFAADARNHI 420
           +    G  +  G  A          +    D   G D    + G      + AA AR  I
Sbjct: 143 KATGIGAFSFRGRHADPFAEPELLTVAAAFDRFAGIDLLKTVVGGEGDRAALAAQARVRI 202

Query: 421 AQELGIINCNCFE--FCWIMDFPFYEWNE---EEKKIDFAHNPFTMPQGGMESLKGNDLL 475
           A      + + +   F  +      E  E    + ++    + +  P+  +  +   D  
Sbjct: 203 A------DDDTWSDIFSKV----LVEHVEPRLGQGRLTIL-SKYPAPEAALARIDPADSR 251

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV-VENRF---GGLYRAFQC 531
              A ++++   G E+A+G      +      F+     K+     R+        A   
Sbjct: 252 --VAERFEIYACGVELANGFGELTDAAEQRIRFNRAMDDKQSRYGERYPLDEDFLAAVAQ 309

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            MP   G+A G DR+VML  GA  + +V   P
Sbjct: 310 -MPEASGVALGFDRLVMLASGALRIDQVVWTP 340


>gi|89067234|ref|ZP_01154747.1| putative lysyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89046803|gb|EAR52857.1| putative lysyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 342

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 62/182 (34%), Gaps = 22/182 (12%)

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE----GAR 178
           S   K R  D RR      ++ R RI  ++R       F E     +  S        A 
Sbjct: 3   SWWDKRRHTD-RRP----LLLTRNRIQAALRAWFADRGFTEIDPAYVVPSPGNEIHLHAL 57

Query: 179 DFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS---DRLPGEFY 235
              +     +     L  +P+   + L+A+G ++ F  +  +RD +  +    R   EF 
Sbjct: 58  PVTLTDADLETRQAWLHTSPEFAMKKLLAAGEEKIFTFSRVWRDREAAAGALHRH--EFT 115

Query: 236 QLDMEMSFVEQDDILNTMENVL--------RGVFEEFSNGNTVSNNFLRICYDDAIRRYG 287
            L+   +    + +++  E +L          V          S    R+   DA  R G
Sbjct: 116 MLEWYRADAPYEQLMDDCEELLAIACEAAGTDVLSHRGETCMPSRGLERLSVADAFLRQG 175

Query: 288 TD 289
            D
Sbjct: 176 ID 177



 Score = 57.8 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 7/109 (6%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-VGISKEV 517
           +  P+  +     +D     A +++L   G E+A+G             F   +   + +
Sbjct: 236 YPAPEAALARRAPDDPR--VAERFELFACGVELANGFGELTDPVEQRARFKADMATRERL 293

Query: 518 VENRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              R+        A    MPP  GIA G DR+VML  GA  + +V   P
Sbjct: 294 YGERYPIDEDFLAAL-ADMPPASGIALGFDRLVMLATGAPRLSDVIWTP 341


>gi|87118910|ref|ZP_01074809.1| hypothetical protein MED121_17824 [Marinomonas sp. MED121]
 gi|86166544|gb|EAQ67810.1| hypothetical protein MED121_17824 [Marinomonas sp. MED121]
          Length = 325

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 4/114 (3%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK- 515
           + +   Q  +  +K +      A +++L   G E+A+G           + F      + 
Sbjct: 211 HSYPASQAALAKIKHSFEGHETAKRFELYWRGMELANGYHELTDPIEQARRFEKDNALRS 270

Query: 516 ---EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              + V      L  A + G+P   G+A G+DR++M L    ++  V  F   +
Sbjct: 271 AQGKEVRALDKNLLAALESGLPNCAGVALGVDRLLMALNQVDDIEMVMPFAKQR 324



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 57/129 (44%), Gaps = 4/129 (3%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSR--VNQGSFYAL 194
             + +  R +++  +R      + +E  T +L+ +S  +   + L      +     Y L
Sbjct: 12  NMQMLQVRAKLLRDIREFFWQRDIMEADTQVLSLSSISDPYIEVLSTQAKCLGLEHTYYL 71

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+   + L+ASG    +Q++  FR E+ +S +   EF  L+     ++   ++  +E
Sbjct: 72  QTSPEFAMKRLLASGSGCIYQVSKAFRKEE-QSKQHSIEFTMLEWYRVGLDDWQLMAEVE 130

Query: 255 NVLRGVFEE 263
             L  V ++
Sbjct: 131 EFLINVSQD 139


>gi|58582032|ref|YP_201048.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84623944|ref|YP_451316.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188576357|ref|YP_001913286.1| tRNA synthetases class II (D, K and N) subfamily [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|58426626|gb|AAW75663.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84367884|dbj|BAE69042.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188520809|gb|ACD58754.1| tRNA synthetases class II (D, K and N) subfamily [Xanthomonas
           oryzae pv. oryzae PXO99A]
          Length = 320

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 66/183 (36%), Gaps = 22/183 (12%)

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFL---VPSRV 186
           LDL        +  R R+  ++R        +E  TP+L+ +   E   +         V
Sbjct: 6   LDL------AALQLRARLNATIRNFFAERGVLEVETPVLSQAGNTEPNIESFSTRFTGHV 59

Query: 187 NQGSFYA-LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           + G+    L  +P+   + L+A+G    +++   FR+ +      P EF  L+       
Sbjct: 60  DAGAPVRWLRTSPEYPLKRLLAAGAGDCYELGRVFRNGEAGGRHNP-EFSMLEWYRIGWN 118

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII-----MH 300
              +      ++R           V     R      ++R G D   LR+PI      +H
Sbjct: 119 DRSLAQETIALIRRALALVGRDAAVQVLTYR---ALFVQRLGIDP--LRDPIETLRAALH 173

Query: 301 NVT 303
           +V 
Sbjct: 174 DVA 176



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 45/113 (39%), Gaps = 13/113 (11%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG---- 512
           + +   Q  +  ++ +D     A +++L     E+A+G    + ++     F        
Sbjct: 209 HDWPASQCALARVRHDDPP--VAERFELYLGSVEVANGYHELNDAQEQRARFVRDNAVRA 266

Query: 513 ---ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              + +  ++ R   +        P   G+A G+DR++M L G   + +V  F
Sbjct: 267 VRGLPQLPLDERLLAVLSQL----PDCAGVAVGVDRLLMALRGTAQIADVLAF 315


>gi|302409622|ref|XP_003002645.1| lysyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261358678|gb|EEY21106.1| lysyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 384

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 14/109 (12%)

Query: 468 SLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI-------------- 513
               +D L + + + +L  +G E+A+     +      +  +   +              
Sbjct: 243 HFLEDDFLELVSARAELFVDGRELANMYEEENDPAAQARKLAEHRVLAGQKPGEDDGELD 302

Query: 514 SKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +            +A + G+PP GG   G+DR+VML  GA  + +   F
Sbjct: 303 ADMEAAPLDKSYIKAMEAGLPPTGGWGCGVDRLVMLFSGANRISDCLTF 351



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 64/165 (38%), Gaps = 9/165 (5%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDI-RDHYGITQVVANPDSACFE 60
           ++RT+        D   +V L G +  +R HG  +IF+ +  D   I  ++   +     
Sbjct: 94  KFRTNWLNQ-DPPDSSKYVTLDGRIQSIRKHGNKLIFVTMVNDRKTIQGMINFKNMKPPM 152

Query: 61  IAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREY 120
           +  + +    +   G  +S + +   A   TG+  L A    IL       L    E   
Sbjct: 153 LLDAFKLFGRMIEKGDHISITGKP--ARSGTGERILEA---HILPELLSPALEQIPESLT 207

Query: 121 PESIRFKYRFLD-LRRDTLHKNIVKRTRIINSMRCRMIAENFIEC 164
               + + R +D L    +   +  ++ ++  +R   + ++F+E 
Sbjct: 208 DPETKSQKRHVDMLVNPEVADTLRLKSHLMQHIRTHFLEDDFLEL 252


>gi|262379362|ref|ZP_06072518.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
 gi|262298819|gb|EEY86732.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
          Length = 333

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 4/119 (3%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAP 198
           +  R  +   +R      N +E  TP+L+ +       A          +   + L  +P
Sbjct: 23  MRARATMYTQIRQFFAERNVLEVETPVLSQAGVTDVHLASVSAQRHVEGKLQIHYLQTSP 82

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           +   + L+ASG    +QI   FRD++    +   EF  L+         D+++    +L
Sbjct: 83  EFTMKRLLASGSGPIYQICKVFRDDEHG-RKHNSEFTMLEWYRPGFSLLDLMHETTALL 140



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK--- 515
           F      +  +K ++     A +++L   G E+A+       S+V+ + F      +   
Sbjct: 222 FPPELASLAKVKTDEDGEQVAARFELYIEGLELANAYDELIDSKVLRERFEADNTERCTL 281

Query: 516 -EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              V      L  A Q  MP   GIA GIDR++M+      +  V  FP
Sbjct: 282 GLPVMPIDENLLTALQY-MPECSGIALGIDRLLMIATRQMRLENVITFP 329


>gi|295691314|ref|YP_003595007.1| tRNA synthetase class II (D K and N) [Caulobacter segnis ATCC
           21756]
 gi|295433217|gb|ADG12389.1| tRNA synthetase class II (D K and N) [Caulobacter segnis ATCC
           21756]
          Length = 348

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 5/117 (4%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN----QGSFYAL 194
              ++ R RI  + R    A+ F E  T  L  S    A      +       + S   L
Sbjct: 18  RPFLLARNRITKAFRAWFEAQGFEEVETAALQVSPGAEAHLHAFATEALSAGGEASPLYL 77

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +P+   + L+A+G ++ F +   +R+ +      P EF  L+   +    + +++
Sbjct: 78  HTSPEFACKKLLAAGEEKIFSLGKVWRNRERGPLHHP-EFTMLEWYRAKAPYETLMD 133



 Score = 47.4 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 34/107 (31%), Gaps = 5/107 (4%)

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE---- 516
            P       +        A +++L   G E+A+            + F      K     
Sbjct: 240 YPIPEAALARPKAADRRVAERFELYACGVELANAFGELTDPVEQRRRFILEMDEKSRVYG 299

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                      A    MP   G A G DR+V+L  GA+ + +V   P
Sbjct: 300 ERHPIDEDFLAALGH-MPEASGSALGFDRLVLLATGARRIEDVLWTP 345


>gi|297715184|ref|XP_002833970.1| PREDICTED: lysyl-tRNA synthetase-like, partial [Pongo abelii]
          Length = 160

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 4/87 (4%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
                 +++L     EI +     +      Q F     +K   ++           A +
Sbjct: 74  KEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALE 133

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            G+PP  G   GIDR+ M L  + N++
Sbjct: 134 YGLPPTAGWGMGIDRVAMFLTDSNNIK 160


>gi|301118244|ref|XP_002906850.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262108199|gb|EEY66251.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 174

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 4/110 (3%)

Query: 169 LTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM-ASGFDRYFQIAPCFRDEDPRS 227
           L   +     ++      +Q +  A  Q+PQ YK +    +  +R F+I P FR E   +
Sbjct: 18  LVGGASGSGANYFTLKYFDQDATLA--QSPQTYKHMACDVASLERVFEIGPGFRAETSNT 75

Query: 228 DRLPGEFYQLDMEMSF-VEQDDILNTMENVLRGVFEEFSNGNTVSNNFLR 276
            R   E   LD+EM+       +L   E  L  + +E  + N    +  R
Sbjct: 76  HRHMCELVGLDLEMTIKAHYHKVLTEKEKWLGRLIKEKYDTNFYILDKFR 125


>gi|167644728|ref|YP_001682391.1| lysine--tRNA ligase [Caulobacter sp. K31]
 gi|167347158|gb|ABZ69893.1| Lysine--tRNA ligase [Caulobacter sp. K31]
          Length = 349

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 5/117 (4%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPSRV---NQGSFYAL 194
              ++ R RI  + R    A +F+E  T  L  S   E        + +    + +   L
Sbjct: 19  RPFLLARNRIKAAFRAWFEARDFLEVETAALQVSPGNEAHLHAFETAALTISGERAPLYL 78

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +P+   + L+A+G  R F     +R+ +  +   P EF  L+          +++
Sbjct: 79  HTSPEFSCKKLLAAGERRIFDFGKVWRNRERGALHHP-EFTMLEWYRVDAPYQTLMD 134



 Score = 45.1 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS-NVGISKEVVE 519
            P       +        A +++L   G E+A+       +    + F   +     V  
Sbjct: 241 YPVAEAALARPKPGDPRVAERFELYACGVELANAFGELTDAGEQRRRFEAEMDEKARVYG 300

Query: 520 NRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            R+        A    MP   G A G DR+VML  GA  V +V   P
Sbjct: 301 ERYPLDEDFLAALAI-MPNASGSALGFDRLVMLAAGASRVDQVMWTP 346


>gi|21242378|ref|NP_641960.1| lysyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21107815|gb|AAM36496.1| lysyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 320

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 6/124 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFL---VPSRVNQGSFYA-L 194
             +  R R+  ++R        +E  TP+L+ +   E   +         V+ G+    L
Sbjct: 9   AALQLRARLNAAIRDFFAERGVLEVETPVLSEAGNTEPNIESFSTRFTGHVDAGAPLRWL 68

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+   + L+A+G    +++   FR+ +      P EF  L+          +     
Sbjct: 69  RTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNP-EFSMLEWYRVGWNDRSLAQETI 127

Query: 255 NVLR 258
            ++R
Sbjct: 128 ELVR 131



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 46/113 (40%), Gaps = 13/113 (11%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG---- 512
           + +   Q  +  ++ +D     A +++L    FE+A+G    + ++     F        
Sbjct: 209 HDWPASQCALARIRHDDPP--VAERFELYLGSFEVANGYHELNDAQEQRARFVRDNAVRA 266

Query: 513 ---ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              + +  ++ R   +        P   G+A G+DR++M L G   + +V  F
Sbjct: 267 ARGLPQLPLDERLLAVLSQL----PDCAGVAVGVDRLLMALRGTTQIADVLAF 315


>gi|258614856|ref|ZP_05712626.1| lysyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 192

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 12/103 (11%)

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
            G ++ ++I   FR+E   +   P EF  L+   ++ + +D++N  E ++R   E+    
Sbjct: 1   GGMEKVYEIGRVFRNEGIDTTHNP-EFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGT 59

Query: 268 NTVSN---------NFLRICYDDAIRRYGTDKPDLRNPIIMHN 301
             ++          +F RI   DAI+       D    + +  
Sbjct: 60  AKITYDGQAVDLESDFKRIHMVDAIKE--QTGVDFWQEMTLEE 100


>gi|332994504|gb|AEF04559.1| lysyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 322

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 6/124 (4%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-----EGARDFLVPSRVNQGSFYA 193
           H + + R  ++ S+R      + +E  TP+L++ +      +        SR        
Sbjct: 10  HDSRIARANLLRSIRHFFYTRDVLEVETPLLSSGTVTDEHLDAFLTKFNHSRDGAPVDLY 69

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+   + L+       +QI   FR E       P EF  L+      +   ++  +
Sbjct: 70  LQTSPEFAMKRLLCGQSGAIYQICKAFRHEGEGRWHNP-EFTMLEWYRPGFDHHALMQEV 128

Query: 254 ENVL 257
           + +L
Sbjct: 129 DALL 132



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 6/112 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK--- 515
           F   Q  +  +   D  +  A ++++   G E+A+G    + +    Q F      +   
Sbjct: 212 FPASQASLARINAQDSRT--ADRFEVYFKGAELANGFHELNEASEQKQRFEQDNEKRRKN 269

Query: 516 -EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
            + V+        A + G+P   G+A GIDR++ML +GA +++EV  FP+S+
Sbjct: 270 GQPVKPIDTRFLSALENGLPHCAGVALGIDRLLMLKIGASHIQEVLNFPVSR 321


>gi|332140131|ref|YP_004425869.1| lysyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550153|gb|AEA96871.1| lysyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 322

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 57/158 (36%), Gaps = 14/158 (8%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-----EGARDFLVPSRVNQGSFYA 193
           H+  V R  I+ ++R     +N +E  TP+L+  +      +         R  + +   
Sbjct: 10  HEARVARAEILRTIREFFHRKNVLEVETPLLSKGTVTDEHLDAFYTAFNFDRSGKPTRLY 69

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+   + L+ +     +QI   FR E       P EF  L+      +   +++ +
Sbjct: 70  LQTSPEYAMKRLLCAESGSIYQICKAFRHEGEGRWHNP-EFTMLEWYRVGFDHFALMDEV 128

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           + +L+                  + Y DA   Y    P
Sbjct: 129 DALLQETLSTLPADT--------MTYQDAFLTYLNIDP 158



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 18/128 (14%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
           D P + +N            F   Q  +  L   D     A ++++   G E+A+G    
Sbjct: 204 DKPCFIYN------------FPASQAALAKLSATDPR--VAERFEVYFKGAELANGFNEL 249

Query: 499 HMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
             ++     F +    +       +        A + G+P   G+A G+DR++ML  GA 
Sbjct: 250 SAAKEQRVRFESDNEKRRASGLVTKPIDENFLNALEVGLPLCAGVALGVDRLLMLKTGAN 309

Query: 555 NVREVSLF 562
           ++ EV  F
Sbjct: 310 HINEVINF 317


>gi|270684423|ref|ZP_06222811.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270316241|gb|EFA28195.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 152

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 20  FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMS 79
            V+++G +   R  G   F+ I+D  G  Q+    D+    +       W L   G ++ 
Sbjct: 63  EVQVAGRIMTRRAMGKATFITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDL---GDIIG 119

Query: 80  RSAETINANIITGQIELSAQKIEILSVAEELPLP 113
                      T ++ +   ++++L+ A      
Sbjct: 120 VKGTLF--KTKTNELTIKTTEVQLLTKALRPLPD 151


>gi|83592414|ref|YP_426166.1| tRNA synthetase, class II (D, K and N) [Rhodospirillum rubrum ATCC
           11170]
 gi|83575328|gb|ABC21879.1| tRNA synthetase, class II (D, K and N) [Rhodospirillum rubrum ATCC
           11170]
          Length = 358

 Score = 65.1 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 6/109 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-VGISKEV 517
           +      +   K +D     A ++++   G E+A+       +      F++ + + + +
Sbjct: 248 YPACMAALSRRKDDDPR--LAERFEVYVGGLELANAFGELTDAAEQRARFTHDMDVKEAL 305

Query: 518 VENRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              R+   G    A   G+ P  GIA G DR+VML  GA  + +V   P
Sbjct: 306 YGERYPIDGDFLEALDQGLAPCSGIALGFDRLVMLCTGADAIDDVLWAP 354



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 54/147 (36%), Gaps = 18/147 (12%)

Query: 155 RMIAENFIECSTPILTASSP------EGARDFLVPSRVNQG-SFYALPQAPQQYKQLLMA 207
            +     IE  TP L  S          A     P   +QG +   L  +P+   + ++A
Sbjct: 34  FLGESGCIEVDTPALQISPGLEPHLRAFATTLEKP--FDQGRATLRLHTSPEFAMKKILA 91

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNG 267
           +G    FQ+A  FR+ +      P EF  L+   S +  + ++   E+++R V       
Sbjct: 92  AGETAIFQLAHVFRNGERGPTHHP-EFTMLEWYRSAMSYEALMAETEDLVRAVARATGAE 150

Query: 268 N--------TVSNNFLRICYDDAIRRY 286
                         + R+    A+ RY
Sbjct: 151 RLVWGDAAADPFGPWERLSVAQALERY 177


>gi|255320355|ref|ZP_05361539.1| tRNA synthetase class II [Acinetobacter radioresistens SK82]
 gi|255302550|gb|EET81783.1| tRNA synthetase class II [Acinetobacter radioresistens SK82]
          Length = 324

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 4/119 (3%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAP 198
           +  R  +   +R      N +E  TP+L+ +       A          +   + L  +P
Sbjct: 14  MRARATMYTQIRQFFAERNVLEVETPVLSQAGVTDVHLASVSAQRHVEGKLQIHYLQTSP 73

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           +   + L+ASG    +QI   FRD++    +   EF  L+         D+++    +L
Sbjct: 74  EFTMKRLLASGSGPIYQICKVFRDDEHG-RKHNSEFTMLEWYRPGFSLLDLMHETTALL 131



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK--- 515
           F      +  +K ++     A +++L   G E+A+       S+V+ + F      +   
Sbjct: 213 FPPELASLAKVKTDEDGEQVAARFELYIEGLELANAYDELIDSKVLRERFEADNTERCTL 272

Query: 516 -EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              V      L  A Q  MP   GIA GIDR++M+      +  V  FP
Sbjct: 273 GLPVMPIDENLLTALQY-MPECSGIALGIDRLLMIATRQMRLENVITFP 320


>gi|145591325|ref|YP_001153327.1| asparagine synthetase A [Pyrobaculum arsenaticum DSM 13514]
 gi|145283093|gb|ABP50675.1| aspartate-ammonia ligase [Pyrobaculum arsenaticum DSM 13514]
          Length = 353

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 57/137 (41%), Gaps = 4/137 (2%)

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
            D        +   + ++R  + ++ F+E  +P++   +  G R     S    G  Y +
Sbjct: 42  TDKYKLVFKVQASALRAIREFLDSKGFVEVLSPVIGPVTDPGIRGAKQASIDFYGHEYKV 101

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR---SDRLPGEFYQLDMEMSFVEQDDILN 251
             +   YKQ  MA+   + + ++P  R E      + R   EFYQ+D+EM      D ++
Sbjct: 102 MSSAILYKQ-YMAASLGKIYFVSPNVRLEPLDSIYTGRHLVEFYQVDVEMYKASYIDAMD 160

Query: 252 TMENVLRGVFEEFSNGN 268
             E ++  V     + +
Sbjct: 161 LAEELVSYVVRYIRDVH 177



 Score = 46.6 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 47/158 (29%), Gaps = 28/158 (17%)

Query: 418 NHIAQELGIINCNCFEFCWI--------MDFPFYEWNEEEKKIDFAHNPFTMPQGGMESL 469
                +LG  N    E  W          D P + ++               P+G     
Sbjct: 205 VEFVNKLGCRNPPKEELLWECEKLMSSHHDAPLFIYD--------------YPKGARGFY 250

Query: 470 KGNDLLSIKAFQ-YDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
              D       + +D++      E  SG  R +  E +++     G      +     L 
Sbjct: 251 DREDPERPGVLRDFDMLYPEGFGEAISGAEREYEPEKLVERIRQGGEDPARYQW---FLQ 307

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            A +       G   G++R+   L G + V E   FP 
Sbjct: 308 MAKELYPLQTAGFGIGVERLTRYLCGLRAVWEARPFPK 345


>gi|332758055|gb|EGJ88381.1| OB-fold nucleic acid binding domain protein [Shigella flexneri
          K-671]
 gi|333004770|gb|EGK24292.1| OB-fold nucleic acid binding domain protein [Shigella flexneri
          K-218]
          Length = 81

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 22 RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS-ACFEIAKSVRSEWVLCIDGLVMSR 80
           L GWV+R R  G +IF+D+RD  GI QV  +PD     ++A  +R+E+ + + G V +R
Sbjct: 2  TLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRAR 61

Query: 81 SAE 83
            +
Sbjct: 62 DEK 64


>gi|153006692|ref|YP_001381017.1| tRNA synthetase class II (D K and N) [Anaeromyxobacter sp. Fw109-5]
 gi|152030265|gb|ABS28033.1| tRNA synthetase class II (D K and N) [Anaeromyxobacter sp. Fw109-5]
          Length = 390

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 6/120 (5%)

Query: 152 MRCRMIAENFIECSTPILTASSP-EGARDFLVPSRV----NQGSFYALPQAPQQYKQLLM 206
           +R  + +  + E  TP L      E          +     +G    L  +P+   + L+
Sbjct: 71  VRRFLSSLGYEEVETPCLVPVPGMEPHLHPFETRFLPEGGGEGRPRWLITSPEYAMKRLL 130

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSN 266
           A GF R FQ++  FR+ +      P EF  L++  +  + + ++  +E ++       + 
Sbjct: 131 AEGFPRIFQLSRVFRNGEVSRTHNP-EFTMLELYRAGTDYEGVMQDLERLVEACARALAG 189



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 3/88 (3%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF--QCG-MPP 535
           A +++L   G E+A+G    + +       +     +  +      L   F    G +P 
Sbjct: 296 AERFELYAGGLELANGYTELNDAAEQRARLAEEQALRRRLGRPVFPLDEPFLEAVGRLPE 355

Query: 536 HGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            GG+A G DR++ML+  A  + +V LFP
Sbjct: 356 AGGVAVGFDRVLMLVAEAAAIEDVLLFP 383


>gi|254447293|ref|ZP_05060760.1| lysyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198263432|gb|EDY87710.1| lysyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 331

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 15/129 (11%)

Query: 439 DFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            FP       E+++    + +   Q  +  L  +D  +  A + +L     E+A+G    
Sbjct: 208 HFP-------ERQLTAVTH-YPASQAALAQLTPDDPAT--AQRSELYWGQVELANGFKEL 257

Query: 499 HMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCG-MPPHGGIAAGIDRIVMLLLGA 553
             ++     F      ++      +       +A + G MP   GIA G+DR++M LL A
Sbjct: 258 TDADEQRARFEADNRERKAKGLIEQPMDECFLQALKQGGMPDCSGIALGVDRLMMKLLDA 317

Query: 554 KNVREVSLF 562
             ++ V  F
Sbjct: 318 DQIQAVMAF 326



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 6/121 (4%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGS--FYALPQAPQQ 200
             R RI+  +R        +E +TP L+ ++     D  + S   +       L  +P+ 
Sbjct: 17  RHRARILQGIRAFFDERGVLEVNTPSLSRAAT---TDVHLDSYRVETDSGPRYLHTSPEL 73

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
             + L+A+G    +Q+   FR  +      P EF  L+   +    DD++     ++R +
Sbjct: 74  PMKRLLAAGVGDCYQLCAVFRPSEQGRYHNP-EFTLLEWYRTAYSIDDLIVETAALIRAL 132

Query: 261 F 261
            
Sbjct: 133 L 133


>gi|148361405|gb|ABQ59284.1| putative lysyl-tRNA synthetase [Mycoplasma arginini]
          Length = 224

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 48/118 (40%), Gaps = 10/118 (8%)

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            +  +  G +R ++I   FR+E   S   P EF  ++   ++ +   ++   E V + + 
Sbjct: 1   LKKCIVGGLERVYEIGRIFRNEGVDSTHNP-EFTSIEFYEAYSDMWGMMERTEGVFKHLT 59

Query: 262 EEFSNGN--------TVSNNFLRICYDDAI-RRYGTDKPDLRNPIIMHNVTEHFVHSE 310
           ++ +                F RI   DA+ ++ G D   L +   +    +H + +E
Sbjct: 60  KKLNIDKVKFNGYDIEFKYPFARINMVDAVSKKIGIDVRKLNDQEAIELAKKHGIKTE 117


>gi|294626371|ref|ZP_06704973.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292599372|gb|EFF43507.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
          Length = 320

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 48/124 (38%), Gaps = 6/124 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFL---VPSRVNQGSFYA-L 194
             +  R R+  ++R        +E  TP+L+A+   E   +         V+ G+    L
Sbjct: 9   AALQLRARLNATIRDFFAERGVLEVETPVLSAAGNTEPNIESFSTRFTGHVDAGAPLRWL 68

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+   + L+A+G    +++   FR+ +      P EF  L+          +     
Sbjct: 69  RTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNP-EFSMLEWYRVGWNDRRLAQETI 127

Query: 255 NVLR 258
            ++R
Sbjct: 128 ELVR 131



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 13/113 (11%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML-------QAFS 509
           + +   Q  +  ++ +D     A +++L    FE+A+G    + +              +
Sbjct: 209 HDWPASQCALARIRHDDPP--VAERFELYLGSFEVANGYHELNDAHEQRVRFVRDNAVRA 266

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             G+ +  ++ R            P   G+A G+DR++M L G   + +V  F
Sbjct: 267 ARGLPQLPLDERLLAALSQL----PDCAGVAVGVDRLLMALRGTTQIADVLAF 315


>gi|190575031|ref|YP_001972876.1| putative lysyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|190012953|emb|CAQ46585.1| putative lysyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
          Length = 318

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 48/129 (37%), Gaps = 6/129 (4%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQ---- 188
             + L + + +R  +   +R      + +E  TPIL+ +   E   D             
Sbjct: 1   MSEALLRALQQRAALNALVRRFFAERDVLEVETPILSVAGNSEPNIDSFHTDFTGHVDAG 60

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G    L  +P+   + L+A+G    +++   FR+ +      P EF  L+      +   
Sbjct: 61  GRRRWLRTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNP-EFTMLEWYRVGWDHHR 119

Query: 249 ILNTMENVL 257
           ++     ++
Sbjct: 120 LVQETAELV 128



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 3/88 (3%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV---VENRFGGLYRAFQCGMP 534
            A +++L     E+A+G    + +      F      +     V+        A    MP
Sbjct: 226 LAERFELYLGAVELANGYHELNDAHEQRARFQRDLQRRHERGQVQPALDEALLAALPSMP 285

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              G+A G+DR++M +     + +V  +
Sbjct: 286 ACAGVAVGVDRLLMAMNRTPRIADVLAY 313


>gi|294665963|ref|ZP_06731227.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|292604266|gb|EFF47653.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 320

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 48/124 (38%), Gaps = 6/124 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFL---VPSRVNQGSFYA-L 194
             +  R R+  ++R        +E  TP+L+A+   E   +         V+ G+    L
Sbjct: 9   AALQLRARLNATIRDFFAERGVLEVETPVLSAAGNTEPNIESFSTRFTGHVDAGAPLRWL 68

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+   + L+A+G    +++   FR+ +      P EF  L+          +     
Sbjct: 69  RTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNP-EFSMLEWYRVGWNDRRLAQETI 127

Query: 255 NVLR 258
            ++R
Sbjct: 128 ELVR 131



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 13/113 (11%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML-------QAFS 509
           + +   Q  +  ++ +D     A +++L    FE+A+G    + +              +
Sbjct: 209 HDWPASQCALARIRHDDPP--VAERFELYLGSFEVANGYHELNDAHEQRVRFVRDNAVRA 266

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             G+ +  ++ R            P   G+A G+DR++M L G   + +V  F
Sbjct: 267 ARGLPQLPLDERLLAALSQL----PDCAGVAVGVDRLLMALRGTTQIADVLAF 315


>gi|310816116|ref|YP_003964080.1| Lysine--tRNA ligase [Ketogulonicigenium vulgare Y25]
 gi|308754851|gb|ADO42780.1| Lysine--tRNA ligase [Ketogulonicigenium vulgare Y25]
          Length = 354

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 52/128 (40%), Gaps = 5/128 (3%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR--DFLVPSRVNQGSF 191
           R       ++ R RI  ++R  + A++FIE     L  +    A    F   +  N G+ 
Sbjct: 20  RHAERRTLLLARNRIQRALREMLDAQDFIEVDPAGLQVTPSNEAHLHGFATTAIGNDGAP 79

Query: 192 --YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  +P+   + L+A+G    +  A  +R+ + R      EF  L+   +  +   +
Sbjct: 80  RQMYLHTSPEFAMKKLLAAGEVAIYAFAHVWRNRE-RGRLHSPEFTMLEWYRAGADYTQL 138

Query: 250 LNTMENVL 257
           ++    ++
Sbjct: 139 MDDTCAMI 146



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 5/93 (5%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF-SNVGISKEVVENRF---GGLYRAFQ 530
            +  + ++++   G E+A+G      ++   + F + +   + +   R+     L  A  
Sbjct: 261 DARLSERFEVYTCGVELANGFGELTDADEQRRRFTAEMDEKERIYAERYPIDESLLAALP 320

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             MPP  GIA G DR+VML  GA  + +V   P
Sbjct: 321 L-MPPTAGIALGFDRLVMLATGAPRIDDVIWTP 352


>gi|166711581|ref|ZP_02242788.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 320

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 66/183 (36%), Gaps = 22/183 (12%)

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFL---VPSRV 186
           LDL        +  R R+  ++R        +E  TP+L+ +   E   +         V
Sbjct: 6   LDL------AALQLRARLNATIRNFFAERGVLEVETPVLSEAGNTEPNIESFSTRFTGHV 59

Query: 187 NQGSFYA-LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           + G+    L  +P+   + L+A+G    +++   FR+ +      P EF  L+       
Sbjct: 60  DAGAPVRWLRTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNP-EFSMLEWYRIGWN 118

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII-----MH 300
              +      ++R           V     R      ++R G D   LR+PI      +H
Sbjct: 119 DRSLAQETIALIRRALALVGRDAAVQVLTYR---ALFVQRLGIDP--LRDPIETLRAALH 173

Query: 301 NVT 303
           +V 
Sbjct: 174 DVA 176



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 45/113 (39%), Gaps = 13/113 (11%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG---- 512
           + +   Q  +  ++ +D     A +++L     E+A+G    + ++     F        
Sbjct: 209 HDWPASQCALARVRHDDPP--VAERFELYLGSVEVANGYHELNDAQEQRARFVRDNAVRA 266

Query: 513 ---ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              + +  ++ R   +        P   G+A G+DR++M L G   + +V  F
Sbjct: 267 ARGLPQLPLDERLLAVLSQL----PDCAGVAVGVDRLLMALRGTAQIADVLAF 315


>gi|194366354|ref|YP_002028964.1| Lysine--tRNA ligase [Stenotrophomonas maltophilia R551-3]
 gi|194349158|gb|ACF52281.1| Lysine--tRNA ligase [Stenotrophomonas maltophilia R551-3]
          Length = 318

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 48/129 (37%), Gaps = 6/129 (4%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQ---- 188
             + L + + +R  +   +R      + +E  TPIL+ +   E   D             
Sbjct: 1   MSEALLRALQQRAALNALLRRFFAERDVLEVETPILSVAGNTEPNIDSFHTDFTGHVDAG 60

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
           G    L  +P+   + L+A+G    +++   FR+ +      P EF  L+      +   
Sbjct: 61  GRRRWLRTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNP-EFTMLEWYRVGWDHHR 119

Query: 249 ILNTMENVL 257
           ++     ++
Sbjct: 120 LVQETAELV 128



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 35/88 (39%), Gaps = 3/88 (3%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVML---QAFSNVGISKEVVENRFGGLYRAFQCGMP 534
            A +++L     E+A+G    + ++      Q        +  V+        A    MP
Sbjct: 226 LAERFELYLGAVELANGYHELNDAQEQRVRFQRDLQRRHERGQVQPALDEALLAALPSMP 285

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              G+A GIDR++M +     + +V  +
Sbjct: 286 ACAGVAVGIDRLLMAMNRTPRIADVLAY 313


>gi|89092068|ref|ZP_01165023.1| lysyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89083803|gb|EAR63020.1| lysyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 322

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 55/125 (44%), Gaps = 10/125 (8%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL-------VPSRVNQGSFYALPQ 196
           KR  +++ +RC     N +E  TP++  S    +  F+        PS     +   +  
Sbjct: 15  KRAELLHQVRCFFKDRNVMEVDTPVM--SHCAVSDPFIDSIEVHYKPSVEADSTLMFMQT 72

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+   + L+A+G    +Q++  FR+ +    R   EF  L+         ++++ +E +
Sbjct: 73  SPEYAMKRLLAAGSGAIYQLSKVFRNGEVG-RRHNPEFTMLEWYRPGFTDTELMDEVEAL 131

Query: 257 LRGVF 261
           +R V 
Sbjct: 132 VRPVL 136



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 57/166 (34%), Gaps = 39/166 (23%)

Query: 417 RNHIAQELGIINCNCF----------------EFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
           R HI  EL   + + +                E  ++MD+P                   
Sbjct: 171 RMHIEIELEDTDPDTWLNLLMSHVIEPHLTEHEAVFVMDYP------------------- 211

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV-- 518
             Q  +  ++ N      A +++L   G E+A+G      ++   +        ++ +  
Sbjct: 212 ASQAALAKVRKNAQGVEVAARFELFVRGVELANGYYELTDAKEQKRRLDADQAQRKQLGL 271

Query: 519 -ENRFGG-LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +      L  A Q G+P   G+A G DR+  L     ++ EV  F
Sbjct: 272 PQRPLDYRLVNALQAGIPDCAGVALGFDRLFWLASDKSSLAEVLPF 317


>gi|115372716|ref|ZP_01460022.1| truncated lysyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115370197|gb|EAU69126.1| truncated lysyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 846

 Score = 64.7 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 5/108 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +      +  LK  D     A + +L   G E+A+G      +      F      +  +
Sbjct: 736 YPASMASLSRLKPGDPS--VAERVELYAKGLELANGFSELTDAVEQRARFVEEQALRRAL 793

Query: 519 ENRFGGLYRAF--QCG-MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 L   F    G MPP  GIA G+DRI+MLL+GA ++ +V LFP
Sbjct: 794 GRTVYPLDERFLEAVGRMPPAAGIAVGLDRILMLLMGAGSITDVLLFP 841



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 9/126 (7%)

Query: 133 LRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSP------EGARDFLVPSR 185
           L  + +  +    R  +  ++R   + + ++E  TP+L  +             F+  + 
Sbjct: 511 LMPNPVQWRAAFGRQMLYAALRRFFMGQGYLEVETPLLIPTPGMEPHITAFEVPFVPETD 570

Query: 186 VNQGSFYALPQAPQQYKQLLMA-SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           V Q     L  +P+   + ++A       FQI   FR+ +      P EF  L+     V
Sbjct: 571 VGQARPLYLHTSPEYAMKRMLADGAHGPLFQICKVFRNGEVSVTHNP-EFTMLEFYRPHV 629

Query: 245 EQDDIL 250
           +   I+
Sbjct: 630 DYHAIM 635


>gi|114799660|ref|YP_761815.1| tRNA synthetase, class II [Hyphomonas neptunium ATCC 15444]
 gi|114739834|gb|ABI77959.1| tRNA synthetase, class II [Hyphomonas neptunium ATCC 15444]
          Length = 347

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 47/125 (37%), Gaps = 11/125 (8%)

Query: 135 RDTLHKNIV----KRTRIINSMRCRMIAENFIECSTPILTASSPEGA-----RDFLVPSR 185
              +H         R R+  ++R     E F+E     L  S    A         V   
Sbjct: 8   NPEVHARRRGHLLARGRVKTALRRWFDGEGFVETECGALVVSPGNEAHLHAFETQFVAEN 67

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               SFY L  +P+   + L+A+G  R F  A  +R+ +   DR   EF  L+   +  E
Sbjct: 68  GQTRSFY-LHTSPEFAMKKLLAAGEPRIFDFARAYRNRETG-DRHAPEFTMLEWYRAGAE 125

Query: 246 QDDIL 250
             D++
Sbjct: 126 MADVM 130



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS-NVGISKEVVENRFG---GLYRAFQCGMP 534
           A ++++   G E+A+G      + ++       + I + V   R+        A    MP
Sbjct: 251 AERFEMYACGVELANGYRELTDAVLLEARQRAEMHIKEAVYGERYPLDPDFIDAVAV-MP 309

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              G+A G DR+ ML  GA ++ +V   P
Sbjct: 310 EASGVALGFDRLAMLASGAPSISDVLWTP 338


>gi|288957802|ref|YP_003448143.1| lysyl-tRNA synthetase, class II [Azospirillum sp. B510]
 gi|288910110|dbj|BAI71599.1| lysyl-tRNA synthetase, class II [Azospirillum sp. B510]
          Length = 370

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 19/167 (11%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP------EGARDFLVPSRVN 187
           RR         R R++ ++R       FIE  TP L  S          A +   P   +
Sbjct: 35  RRRPFLA---ARGRVLTAVRRVFEELAFIEVDTPALQVSPGMEPHLQAFATELRGPHPDD 91

Query: 188 QGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247
           + + Y L  +P+   + L+ +G  R +Q+   +R+ + RS     EF  L+   +     
Sbjct: 92  RRTLY-LHTSPEFAMKKLLVAGVPRLWQLTHAYRNGE-RSGTHAPEFSMLEWYRAGDGYR 149

Query: 248 DILNTMENVLRGVFE-------EFSNGNTVSN-NFLRICYDDAIRRY 286
            +++   ++LR   E       EF   N      +  +   DA   Y
Sbjct: 150 TLIDDCRDLLRAGAEAGGRRRFEFRGMNCDPFAAWRVLTVPDAFHEY 196



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 6/98 (6%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN-VGISKEVVENRF---GGL 525
           K  D     A +++L   G E+A+       + V    F   + + + +   RF      
Sbjct: 271 KPEDPR--LAERFELYACGLELANAFGELTDAAVQRARFEADMALKERLYGERFPVDEDF 328

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A + GMP   GIA G DR+ ML  GA ++ +V   P
Sbjct: 329 LAALEHGMPQSSGIALGFDRLAMLCSGAGSIDQVLWLP 366


>gi|327310194|ref|YP_004337091.1| asparagine synthetase A [Thermoproteus uzoniensis 768-20]
 gi|326946673|gb|AEA11779.1| asparagine synthetase A [Thermoproteus uzoniensis 768-20]
          Length = 348

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 4/149 (2%)

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV 182
               KY +     D        +   + ++R  + ++ F+E  +PI+   +  G R    
Sbjct: 26  EEWVKYSWRWAVTDKYKLVFKVQASALRAIREFLDSKGFVEVLSPIVGPVTDPGIRGAKQ 85

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR---SDRLPGEFYQLDM 239
            +    G+ Y +  +   YKQ  MA+   + + ++P  R E      + R   EFYQ+D+
Sbjct: 86  ATIDFYGAEYKVMSSAILYKQ-YMAASLGKIYFVSPNIRLEPNDSIYTGRHLVEFYQVDI 144

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGN 268
           EM      D ++  E ++  V +   + +
Sbjct: 145 EMYKASYMDAMDVAEELVTYVVKYIKDVH 173



 Score = 44.3 bits (103), Expect = 0.063,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 50/155 (32%), Gaps = 22/155 (14%)

Query: 418 NHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN--PFT---MPQGGMESLKGN 472
                +LG  N    E  W           E +K+  AH+  PF     P+G        
Sbjct: 200 VEFVNKLGCRNPPKEELMW-----------ECEKVMSAHHDSPFFVYDYPRGARGFYDRE 248

Query: 473 DLLSIKAFQ-YDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
           D       + +D++      E  SG  R +  E ++      G      +     L  A 
Sbjct: 249 DPERRGILRDFDMLYPEGFGEAISGAEREYEPERLVARIRESGEDPAKYQW---FLQMAK 305

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
           +       G   G++R+   L G + V E   +P 
Sbjct: 306 ELYPLQTAGFGIGVERLTRYLCGLRAVWEARPYPK 340


>gi|15964029|ref|NP_384382.1| putative lysyl-tRNA synthetase protein [Sinorhizobium meliloti
           1021]
 gi|307301175|ref|ZP_07580937.1| tRNA synthetase class II (D K and N) [Sinorhizobium meliloti
           BL225C]
 gi|307321076|ref|ZP_07600481.1| tRNA synthetase class II (D K and N) [Sinorhizobium meliloti AK83]
 gi|15073205|emb|CAC41713.1| Putative lysyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306893248|gb|EFN24029.1| tRNA synthetase class II (D K and N) [Sinorhizobium meliloti AK83]
 gi|306903631|gb|EFN34218.1| tRNA synthetase class II (D K and N) [Sinorhizobium meliloti
           BL225C]
          Length = 350

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 5/131 (3%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS--FYAL 194
              ++ R RI +++R      +FIE  T  L  S    A    F   +    GS     L
Sbjct: 17  RPFLIGRNRIQSALRRFFDERDFIEVDTAALQVSPGNEAHLHAFATEALGLDGSVQPLYL 76

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+   + L+A+G  R    A  +R+ +      P EF  L+   +    + +++   
Sbjct: 77  HTSPEFACKKLIAAGERRIACFAHVYRNRERGPLHHP-EFTMLEWYRAEEGYETLMHDCG 135

Query: 255 NVLRGVFEEFS 265
            +L    E  +
Sbjct: 136 EILALAAETVA 146



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 5/89 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
           A +++L   G E+A+       +    + F      K  V             A   GMP
Sbjct: 257 AERFELYACGVELANAFGELTDAAEQRRRFELEMAEKARVYGETYPIDEDFLAAL-AGMP 315

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              GIA G DR+VML  GA  + +V   P
Sbjct: 316 EASGIALGFDRLVMLATGASRIDQVLWAP 344


>gi|222087705|ref|YP_002546242.1| lysyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221725153|gb|ACM28309.1| lysyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 354

 Score = 64.7 bits (156), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 9/126 (7%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSP------EGARDFLVPSRVNQGSFYALPQAP 198
           R  I  ++R      +FIE  T  L  S          A + L      Q + + L  +P
Sbjct: 27  RNAIQAALRGFFARNDFIEVDTSTLQVSPGNEAHLHAFATEALTTD--GQAAPFYLHTSP 84

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L+A+G +R    A  +R+ +      P EF  L+   +    + ++N    +L 
Sbjct: 85  EFACKKLLAAGEERIACFAHVYRNRERGPLHHP-EFTMLEWYRAGETYETLMNDCAVLLA 143

Query: 259 GVFEEF 264
              E  
Sbjct: 144 LAAETV 149



 Score = 50.1 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 5/95 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
           A +++L   G E+A+       ++   + F      K  +            +A     P
Sbjct: 261 AERFELYACGVELANAFGELTNAQEQRRRFEIEMAEKARIYGETYPLDEDFLQALAV-TP 319

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
              GIA G DR+VML  GA  + +V   P+S+   
Sbjct: 320 EASGIALGFDRLVMLATGASRIEQVLWAPVSEFGS 354


>gi|56461375|ref|YP_156656.1| hypothetical protein IL2275 [Idiomarina loihiensis L2TR]
 gi|56180385|gb|AAV83107.1| Truncated class II lysyl-tRNA synthetase [Idiomarina loihiensis
           L2TR]
          Length = 325

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 6/108 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +  +  ++     + +++    G E+A+G             F      ++ +
Sbjct: 215 FPKSQAALAKIDQHNPR--VSRRFEFYYQGVELANGYNELADPAEQRLRFDQDNQRRKQL 272

Query: 519 ----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
               +     L  A + G P   G+A G DR++M+  GAK++ EV  F
Sbjct: 273 NLPTQPEDTRLLAALESGFPACSGVALGFDRLLMIACGAKSITEVLPF 320



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 60/189 (31%), Gaps = 18/189 (9%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG------ARDFLVPSR 185
           D R       +VKR   +  +R         E  T +L+              +F  P  
Sbjct: 4   DWRPAADWSVLVKRADFMRQVRQFFYERKVTEVDTHLLSQFGVTDCHLNNLTTEFKYPLA 63

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
               + Y L  +P+   + ++A+     +Q++   RD++      P EF  L+      +
Sbjct: 64  SGNRTLY-LQTSPEYAMKRILAAYGKDIYQLSHVVRDDEIGRFHNP-EFTLLEWYRVGYD 121

Query: 246 QDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII--MHNVT 303
              ++  +  +L  V          +     I Y      Y  + P     +      + 
Sbjct: 122 DIQLIAEVSELLTEV--------CDAPETKVITYQQCFLDYLGEDPLTTCGVENIRQELI 173

Query: 304 EHFVHSEFR 312
           E    +++ 
Sbjct: 174 EQPALTDWM 182


>gi|207110007|ref|ZP_03244169.1| aspartyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 98

 Score = 64.3 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/80 (41%), Positives = 54/80 (67%), Gaps = 3/80 (3%)

Query: 223 EDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
           ED R+DR P EF Q+D EMSF +++D++  +E++L+ +F+     +T+S  F R+ Y +A
Sbjct: 1   EDLRADRQP-EFTQIDAEMSFCDENDVMGVVEDLLQEIFKAIG--HTISTPFKRMPYKEA 57

Query: 283 IRRYGTDKPDLRNPIIMHNV 302
           +  YG+DKPDLR  + +  V
Sbjct: 58  MENYGSDKPDLRFELPLIEV 77


>gi|220934407|ref|YP_002513306.1| tRNA synthetase class II (D K and N) [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995717|gb|ACL72319.1| tRNA synthetase class II (D K and N) [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 299

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 7/117 (5%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
            ++ F H  +   Q  +  L+  D  +  A +++L     E+A+G      ++     F+
Sbjct: 181 GRLIFIHG-YPASQAALARLRPGDPPT--AARFELHWGSLELANGFHELSDADEQAARFA 237

Query: 510 NVGISKEV----VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                ++            L  A Q G+P   G+A G+DR++M L GA ++ +V  F
Sbjct: 238 RDLAIRQARGLPEVPVDRHLLAALQAGLPDCAGVALGLDRLLMCLTGASHIDQVLAF 294



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 4/115 (3%)

Query: 148 IINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLM 206
           +   +R        +E  TP+L+ A++ + A + LV        +  L  +P+   + L+
Sbjct: 1   MHAGIRAFFAGRGVLEVETPMLSRAAATDPALESLVAGT--DAGYRYLHTSPEFPMKRLL 58

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           A+G    +QIA  FR  +      P EF  L+      ++  +++ +E ++R + 
Sbjct: 59  AAGSGDIYQIARVFRAGEAGRYHNP-EFSLLEWYRLDFDEHRLMDEVEALVRTLA 112


>gi|325294519|ref|YP_004281033.1| Lysine--tRNA ligase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325064967|gb|ADY72974.1| Lysine--tRNA ligase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 315

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 54/135 (40%), Gaps = 5/135 (3%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTA---SSPEGARDFLVPSRVNQGSF-YA 193
           + + +  R++++  +R     + FIE  TP++              +  S  +   F + 
Sbjct: 1   MEEILKLRSKLLKVVRGFFELQGFIEVETPLMVPYENPDSNVVNVKVSFSNFSGKKFNWF 60

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+ + + ++  G  R +QI+  FR+ +  ++    EF  ++   +  +    +   
Sbjct: 61  LHTSPEFFMKRIIWHGIPRIYQISKVFRNGEI-TESHNVEFTMVEWYRTGADYKKGMEET 119

Query: 254 ENVLRGVFEEFSNGN 268
             +L+   +      
Sbjct: 120 LELLKECVKAAKKEE 134



 Score = 49.7 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A +++L   G E+A+G       E   + F      K+ V+  F  L +  +  +P   G
Sbjct: 223 AERFELYVCGLELANGYTELTDFESYKKKF--FEKGKQAVDKGFLKLLK--EKPLPSCEG 278

Query: 539 IAAGIDRIVMLLLGAKNVREVSLF 562
           +A G DR++ML+ G K + EV  F
Sbjct: 279 VALGFDRVLMLITGKK-IHEVIPF 301


>gi|78486081|ref|YP_392006.1| lysine--tRNA ligase [Thiomicrospira crunogena XCL-2]
 gi|78364367|gb|ABB42332.1| truncated lysyl-tRNA synthetase GenX [Thiomicrospira crunogena
           XCL-2]
          Length = 324

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 55/123 (44%), Gaps = 6/123 (4%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPE-----GARDFLVPSRVNQGSFYALPQAP 198
           KR++ +  +R    A + +E  TP+L++++         + ++    + +   + L  +P
Sbjct: 14  KRSQWLKDLRAFFYARSVMEVDTPMLSSAATPDLHLRSLKTWVQVPGIKEKQPFFLHTSP 73

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L+ +G    F +   FRDED  S R   EF  L+      +  +++     V++
Sbjct: 74  EYPMKRLLCAGSGDIFYLGKVFRDEDL-SPRHQVEFTLLEWYRLGFDLKEMMTETAAVIQ 132

Query: 259 GVF 261
            + 
Sbjct: 133 LII 135



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 9/111 (8%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F  P       K +   +  A ++++   G E+A+G       E+    F      +E  
Sbjct: 211 FHYPARDAALAKISHENAQVALRFEVFVEGMELANGYQELQAPELYRSRFEASLSERE-- 268

Query: 519 ENRFG------GLYRAF-QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           E+ F        L  A  + G+P   G+A G+DR+  L L   N+  V  F
Sbjct: 269 EHGFDSVPLDVNLLDALQEAGLPDCSGVALGVDRLFALALACDNIESVMPF 319


>gi|156095556|ref|XP_001613813.1| asparagine-tRNA ligase [Plasmodium vivax SaI-1]
 gi|148802687|gb|EDL44086.1| asparagine-tRNA ligase, putative [Plasmodium vivax]
          Length = 1047

 Score = 64.3 bits (155), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 5/102 (4%)

Query: 165 STPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
             P    +  EG           +G    L Q+PQ YKQ+L+ + F+R +++   +R+E 
Sbjct: 539 EPPSCQLNGSEGGSGCYKI----EGEKLILAQSPQFYKQMLINADFERVYEMNYSYRNER 594

Query: 225 PRSDRLPGEFYQLDMEM-SFVEQDDILNTMENVLRGVFEEFS 265
             + R   EF  LD+E   +    +I+  M  +LR + E   
Sbjct: 595 FHTSRHLNEFLSLDIERVIYNNYYEIVMPMYRLLRRLNEYLL 636



 Score = 45.8 bits (107), Expect = 0.020,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 32/114 (28%)

Query: 479  AFQYDLVCNGFEIASGGIRN-HMSEVMLQAFSNVGISKE--------------------- 516
               +D    G EI SG  R  H+  ++ +  +  G  +                      
Sbjct: 931  TNSFDFFYKGIEIISGSQRINHLPLLLFKVVNTCGPDENPQRKPSSCALPIREKSNFSIS 990

Query: 517  ----------VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
                        ++  G    +F+    PHGG+A G +R ++  L   NV+   
Sbjct: 991  DYLKKGEELIDGDSTLGKYINSFRFASKPHGGLALGFERYLLAALNLGNVKRAV 1044


>gi|533097|gb|AAA80003.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 77

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 4/74 (5%)

Query: 491 IASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
           I  G  R H  E++       G+      + +       + G  PH G   G++R V  +
Sbjct: 1   IIGGSERIHDMELLESRLKEHGLD----SDAYKWYAELRKYGSVPHSGFGLGLERTVAWI 56

Query: 551 LGAKNVREVSLFPM 564
            GA +VRE   FP 
Sbjct: 57  SGAPHVRETIPFPR 70


>gi|224069900|ref|XP_002303078.1| predicted protein [Populus trichocarpa]
 gi|222844804|gb|EEE82351.1| predicted protein [Populus trichocarpa]
          Length = 626

 Score = 63.9 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 5/89 (5%)

Query: 479 AFQYDLVCN-GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG 537
           A  +D+V      I +G       +++ +    + + +     ++       + G   H 
Sbjct: 537 AAAFDMVVPKAGTIITGSQSEERIDILNKTIEELRLPR----EQYEWYMDLRRHGTVEHS 592

Query: 538 GIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           G + G D +V+   G  +VR+V  FP S+
Sbjct: 593 GFSLGFDLMVLFTTGLPDVRDVIPFPRSR 621



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 58/153 (37%), Gaps = 7/153 (4%)

Query: 35  GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI 94
            + +L + D   +  +    DS+   +++ +     + ++G++   S +  ++      I
Sbjct: 138 SVAYLLVSDGSSVASLQVVVDSSIAPLSQLLPIGTCILVEGVLKEPSMQGKHS------I 191

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRC 154
           EL  ++I  +   E+   P+  +R  P            R  T+       + +  + + 
Sbjct: 192 ELKVEQILHIGKVEQDRYPLSKKRL-PLEALRDCSHFRPRTTTVASVTRISSALTFATQT 250

Query: 155 RMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
               + F+    PI+T +  EG  +    + V 
Sbjct: 251 FFHDKGFLYVQVPIITTTDGEGFSEKFQVTTVL 283



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 52/188 (27%), Gaps = 18/188 (9%)

Query: 187 NQGSFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
             G F++                A      F   P FR +   S +   E + ++++M+F
Sbjct: 360 FYGDFFSQQTYLTVSGLLHLESYACAMGNVFSFGPRFRADRKESAKRISEMWMVEVQMAF 419

Query: 244 VEQDDILNTMENVLRGVFEEFSNGNTVSNNF--LRICYDDAIRRYGTDKPDLRNPIIMHN 301
            + +D +N  +   + + +      +    F   RI                   +    
Sbjct: 420 SQLEDAMNCADEYFKFLCKWILKNCSEDMKFVSKRIDKSS------------SYRLESMI 467

Query: 302 VTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQ-PGLAYIF 360
            +     S      K+       + W I       +    D   +          L   +
Sbjct: 468 SSSIEKISYMEALKKVAVKFELNQEWGIALTPEHLSYLAEDVYRKPVIIYNYPKELKPFY 527

Query: 361 WRLDESGN 368
            RL++ G 
Sbjct: 528 VRLNDDGK 535


>gi|324520043|gb|ADY47544.1| Asparaginyl-tRNA synthetase [Ascaris suum]
          Length = 155

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 31/133 (23%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF-EI 491
              ++  FP             +  PF M +   +           A  +DL+     E+
Sbjct: 46  SPLFVTYFP------------SSQKPFYMSRTSDDRY---------AECFDLIAPYVGEL 84

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
           A G +R   ++ +                           G PP  G   G++R++  L 
Sbjct: 85  AGGSLRETDADKLRARGCG---------EALKWYVDLRSSGHPPTAGFGIGMERLMQSLF 135

Query: 552 GAKNVREVSLFPM 564
           G  N+++   FP 
Sbjct: 136 GIVNIKDTVAFPR 148


>gi|149377737|ref|ZP_01895471.1| lysyl-tRNA synthetase (class II) [Marinobacter algicola DG893]
 gi|149357963|gb|EDM46451.1| lysyl-tRNA synthetase (class II) [Marinobacter algicola DG893]
          Length = 245

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 4/92 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQCGMP 534
           A +++L   G E+ +G       +   + F     ++  V             A   G+P
Sbjct: 153 AHRFELYVGGVELCNGYWELTDPDEQRRRFEADNQARRRVGKLEMPIDQAFMAALDSGVP 212

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
              G+A G+DR++ML LG   +  V  FP  +
Sbjct: 213 DCSGVALGLDRLLMLKLGLDELAGVIAFPADR 244



 Score = 47.0 bits (110), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 9/108 (8%)

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + ++A+G    +QIA  FRD +    R   EF  L+         D++  +  ++ G  
Sbjct: 1   MKRMLAAGSGPIYQIARVFRDGEFG-RRHNPEFSLLEWYRPGFTDVDLMEEVSELVCG-- 57

Query: 262 EEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
                          + Y DA  R+    P L     +    E ++ S
Sbjct: 58  ------WLGCEPPRTMDYRDAFLRFAGIDPFLAGKDELSERCEQWMES 99


>gi|93005130|ref|YP_579567.1| lysine--tRNA ligase [Psychrobacter cryohalolentis K5]
 gi|92392808|gb|ABE74083.1| Lysine--tRNA ligase [Psychrobacter cryohalolentis K5]
          Length = 340

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 54/133 (40%), Gaps = 11/133 (8%)

Query: 136 DTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL------VPSRVNQ 188
            T+      +R ++++ +R        +E  TP+L+ +   G  D          +  ++
Sbjct: 16  PTMTFAMAQQRAKLMSVIRQFFAMRQVLEVQTPLLSQA---GNTDTFLQSVAAQVTYQDK 72

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
              Y L  +P+   + L+AS     +QI P FRD +  + R   EF  L+        D 
Sbjct: 73  PCTYYLHTSPEFAMKRLLASWQVPIYQICPVFRDNEIGA-RHNIEFTMLEWYQPNYSLDG 131

Query: 249 ILNTMENVLRGVF 261
           +   +  +L  V+
Sbjct: 132 LAAELGELLEMVY 144



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 11/92 (11%)

Query: 479 AFQYDLVCNGFEIASGGIR-------NHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           A +++L   G EIA+               E   +      + +  ++            
Sbjct: 249 AKRFELYIKGIEIANAYDELADGQALRERFEQDNKLRGRHNLPQMPIDEHLIAASDDL-- 306

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              P  GIA G+DR++M+L  A ++ EV  FP
Sbjct: 307 --IPCSGIAVGLDRLLMVLTDATSLEEVISFP 336


>gi|325115894|emb|CBZ51448.1| Lysyl-tRNA synthetase, related [Neospora caninum Liverpool]
          Length = 2547

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 28/117 (23%)

Query: 479  AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS----------------------KE 516
            A +++    G E+A G          L+ F++                          K 
Sbjct: 2429 AERFETYVAGMEMADGYSELTDPLEQLKRFASQRKEAKTSVDDHADACGGLTPETQDTKN 2488

Query: 517  VVENRFG------GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              E +            A   G+PP  G+  G+DR+VMLL  A  +R+V   P+ ++
Sbjct: 2489 QAEAKADRTVPNQEFIAALMLGLPPTAGLGIGLDRLVMLLTDAPLIRDVVHMPLRKS 2545



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 3/86 (3%)

Query: 181  LVPSRVNQGSFYA-LPQAPQQYKQLLMASGF-DRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
            L  S ++       L  AP+   + L+ SG  D+ F+I  CFR+E   S R   EF  ++
Sbjct: 2119 LFESYLHALDLPVHLRIAPELALKRLVVSGIADKVFEIGRCFRNEGI-SWRHQPEFLSME 2177

Query: 239  MEMSFVEQDDILNTMENVLRGVFEEF 264
               +F   +D+L   E +LR      
Sbjct: 2178 AYATFWTYEDMLALTEEILRLCAARV 2203


>gi|289669580|ref|ZP_06490655.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 320

 Score = 63.9 bits (154), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 48/124 (38%), Gaps = 6/124 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFL---VPSRVNQGSFYA-L 194
             +  R ++  ++R      N +E  TP+L+ +   E   +         V+ G+    L
Sbjct: 9   AALQLRAQLNAAIRAFFAERNVLEVETPVLSEAGNTEPNIESFSTRFTGHVDAGAPLRWL 68

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+   + L+A+G    +++   FR+ +      P EF  L+          +     
Sbjct: 69  RTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNP-EFSMLEWYRVGWNDRSLAQETI 127

Query: 255 NVLR 258
            ++R
Sbjct: 128 ALVR 131



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 46/113 (40%), Gaps = 13/113 (11%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG---- 512
           + +   Q  +  ++ +D     A +++L    FE+A+G    + ++     F        
Sbjct: 209 HDWPASQCALARVRNDDPP--VAERFELYLGSFEVANGYHELNDAQEQRARFVRDNAVRA 266

Query: 513 ---ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              + +  ++ R   +        P   G+A G+DR++M L G   + +V  F
Sbjct: 267 ARGLPQLPLDERLLAVLSQL----PDCAGVAVGVDRLLMALRGTAQIADVLAF 315


>gi|260464412|ref|ZP_05812603.1| Lysine--tRNA ligase [Mesorhizobium opportunistum WSM2075]
 gi|259029882|gb|EEW31167.1| Lysine--tRNA ligase [Mesorhizobium opportunistum WSM2075]
          Length = 348

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 59/160 (36%), Gaps = 13/160 (8%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPSRVNQG---SFYAL 194
              ++ R  +  ++R    A++FIE  T  L  S   E          V      S   L
Sbjct: 17  RPRLMLRNGLTTALRDWFAAQDFIEVETAALQISPGNEAHLAAFATEVVGPDGARSPLYL 76

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+   + L+A+G  R F + P +R+ +      P EF  L+          ++    
Sbjct: 77  HTSPEFACKKLLAAGERRIFSLGPVWRNRERGPLHHP-EFTMLEWYRVGETYGSLMRDCA 135

Query: 255 NVL-----RGVFEEFSNGNTVSNNF---LRICYDDAIRRY 286
           ++L     R     FS  +   + F    R+   DA  RY
Sbjct: 136 DLLALAATRAGATRFSFRDRDCDPFAEPERLTVADAFTRY 175



 Score = 60.9 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 59/196 (30%), Gaps = 13/196 (6%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW- 436
                              D    +A D          A       L     + +   + 
Sbjct: 160 FAEPERLTVADAFTRYSGIDLLATVAADGSTDREALYAALIKAG--LRTAPDDSWADLFS 217

Query: 437 -IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            +      E  E    I  A      P       + +   +  A +++L C G E+A+G 
Sbjct: 218 RV----MVEKIEPNLGIGRATILCEYPVAEAALARPSPGDARVAERFELYCCGVELANGF 273

Query: 496 IRNHMSEVMLQAFS-NVGISKEVVENRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                     + F   +   + +   R+        A    MP   GIA G DR+ ML  
Sbjct: 274 GELTDPAEQRRRFILEMDEKERIYGERYPLDEDFLAALAI-MPQASGIALGFDRLAMLAT 332

Query: 552 GAKNVREVSLFPMSQN 567
           GA+ + +V   P++ +
Sbjct: 333 GARKIEDVIWTPVTGS 348


>gi|257454948|ref|ZP_05620196.1| putative lysyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257447658|gb|EEV22653.1| putative lysyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 321

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 10/128 (7%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL---VPSRV---NQGSFYA 193
           +    R  +  ++R        +E  TP+++ +   G  D     V S V   +  + Y 
Sbjct: 12  QTAQARAAMYATIRQFFAERQVLEVQTPVMSQA---GNTDIFLQSVSSNVTVSDHPTTYY 68

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+   + L+A+     +QI P FRD +  S R   EF  L+        D++    
Sbjct: 69  LHTSPEFAMKRLLAAWQVPMYQICPVFRDNEIGS-RHNIEFTMLEWYRPNFSLDELAKET 127

Query: 254 ENVLRGVF 261
            +++  V 
Sbjct: 128 NDLVSAVL 135



 Score = 60.5 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 11/92 (11%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK-------EVVENRFGGLYRAFQC 531
           A +++L  NG EIA+        + +   F    +++         ++        A   
Sbjct: 230 ARRFELYINGLEIANAYDELADGQALRLRFDEDNVARKKRGLPVMPIDENLLAACDAL-- 287

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             P   GIA GIDR++M+  G  ++R+V   P
Sbjct: 288 --PACSGIALGIDRLLMIKTGKTHIRDVIALP 317


>gi|323138165|ref|ZP_08073238.1| lysyl-tRNA synthetase-related protein GenX [Methylocystis sp. ATCC
           49242]
 gi|322396627|gb|EFX99155.1| lysyl-tRNA synthetase-related protein GenX [Methylocystis sp. ATCC
           49242]
          Length = 347

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 5/100 (5%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPSRVNQG---SFYALPQAPQQ 200
           R +I  + R    +E F E  T  L  S   E          + QG   S   L  +P+ 
Sbjct: 23  RGKITAATRHFFASEGFTEVETAALQVSGGNETHLTAFSTELIGQGGDRSRLFLHTSPEF 82

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
             + L+A+G +R F +A  FR+ +  +   P EF  L+  
Sbjct: 83  ACKKLLAAGEERIFTLARVFRNRERSALHHP-EFTMLEWY 121



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 40/109 (36%), Gaps = 7/109 (6%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           + + +  +     +D     A +++L   G E+A+G           + F      K  +
Sbjct: 234 YPLSEAALARPSEDDPR--FADRFELYVCGVEVANGFAELTDPVEQRRRFEAQMAEKSRI 291

Query: 519 ENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                        A    MP   G+A G DR+VML  GA+ +  V   P
Sbjct: 292 YREHYPIDEDFLEALAL-MPQASGVALGFDRLVMLATGAERIEHVLWTP 339


>gi|254523913|ref|ZP_05135968.1| lysyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219721504|gb|EED40029.1| lysyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 318

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 6/123 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQ----GSFYAL 194
           + + +R  +   +R      + +E  TPIL+ +   E   D             G    L
Sbjct: 7   RTLQQRAALNALVRRFFAERDVLEVETPILSVAGNTEPNIDSFHTDFSGHVDAGGRRRWL 66

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+   + L+A+G    +++   FR+ +      P EF  L+      +   ++    
Sbjct: 67  RTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNP-EFTMLEWYRVGWDHHRLVQETT 125

Query: 255 NVL 257
            ++
Sbjct: 126 ELV 128



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 3/88 (3%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV---VENRFGGLYRAFQCGMP 534
            A +++L     E+A+G    + +      F      +     V+        A    MP
Sbjct: 226 LAERFELYLGPVELANGYHELNDAHEQRARFQRDLQRRHERGQVQPALDEALLAALPSMP 285

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              G+A G+DR++M +     + +V  +
Sbjct: 286 ACAGVAVGVDRLLMAMNRTPRIADVLAY 313


>gi|108758409|ref|YP_633718.1| putative lysyl-tRNA synthetase-related protein GenX [Myxococcus
           xanthus DK 1622]
 gi|108462289|gb|ABF87474.1| putative lysyl-tRNA synthetase-related protein GenX [Myxococcus
           xanthus DK 1622]
          Length = 346

 Score = 63.5 bits (153), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 3/92 (3%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF--QCG 532
            ++ A + +L   G E+A+G              +     +  +      L   F    G
Sbjct: 250 DAVVAERVELYAKGLELANGFSELTDPVEQRARLTEEQELRRQLGRAVYPLDERFLDAVG 309

Query: 533 -MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            MPP  GIA G+DRI+MLLLG + + +V LFP
Sbjct: 310 RMPPSAGIAVGLDRILMLLLGVQRISDVLLFP 341



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 11/123 (8%)

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP--------EGARDFLVPSRVNQ 188
           +  +    R  + +++R    A  ++E  TP+L  +          E    F+  + V  
Sbjct: 17  SQWRAARGRQSLYSALRRFFAAHGYLEVETPLLIPTPGMEPHINAFEAG--FIPETDVGS 74

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
                L  +P+   + L+A G    FQ+   FR+ +      P EF  L+      +   
Sbjct: 75  ARTLYLHSSPEYAMKRLLADGAGPLFQLCKVFRNGEVSPTHNP-EFTMLEFYRPHADYHA 133

Query: 249 ILN 251
           I++
Sbjct: 134 IMD 136


>gi|293609902|ref|ZP_06692204.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828354|gb|EFF86717.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 333

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 51/121 (42%), Gaps = 4/121 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAPQQY 201
           R ++ + +R      + +E  TPI++ +       A    +     +     L  +P+  
Sbjct: 26  RAKLYSQIRQFFAERDVMEVETPIVSQAGVTDVHLASVQALRHINGKLQTQYLQTSPEFA 85

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ASG    +QI   FRD++    +   EF  L+     ++   +++   ++L+   
Sbjct: 86  MKRLLASGSGPIYQICKVFRDDEHG-RKHNSEFTMLEWYRPGLDLKALMHETADLLQTCL 144

Query: 262 E 262
           +
Sbjct: 145 Q 145



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           F      +  +K ++     A ++++   G E+A+       ++V+   F      +   
Sbjct: 222 FPPEMASLAKVKVDEDGEEVAARFEVYIEGLELANAYDELLDADVLRSRFEADNAERAKQ 281

Query: 518 ---VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              V      L  A    MP   GIA GIDR++M+ +    + +V  FP
Sbjct: 282 GLHVMPLDEHLLAALPH-MPECSGIALGIDRLLMVAMDQVKIEKVVTFP 329


>gi|86750072|ref|YP_486568.1| tRNA synthetase, class II (D, K and N) [Rhodopseudomonas palustris
           HaA2]
 gi|86573100|gb|ABD07657.1| tRNA synthetase, class II (D, K and N) [Rhodopseudomonas palustris
           HaA2]
          Length = 351

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 46/124 (37%), Gaps = 12/124 (9%)

Query: 124 IRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP 183
              + R+LD         +  R  +  + R      +F E  T IL  S P        P
Sbjct: 10  WWNRDRYLD-----RQPFLRARGAVTRAARDWFATADFAEVETAILQLS-PGNETHLHAP 63

Query: 184 SRVNQGSFYA-----LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
               +G   A     L  +P+   + L+A+G  R F+ A  FRD + R      EF  L+
Sbjct: 64  RTELKGPDGARRTRYLRTSPEFACKKLLAAGEQRIFEFARVFRDRE-RGRLHLPEFTMLE 122

Query: 239 MEMS 242
              +
Sbjct: 123 WYRA 126



 Score = 49.7 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 7/115 (6%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF-SNVGISKEV 517
           +  P+  +   K  D     A ++++   G E+A+G      +      F + +   +  
Sbjct: 240 YPAPEAALARTKAGDPR--VAERFEVYACGVELANGFGELTDAAEQRARFTAAMDEKQRR 297

Query: 518 VENRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
              R+        A    MP   G+A G DR+VML  GA ++ +V   P +    
Sbjct: 298 YGERYPLDEDFLAAVGQ-MPEASGVALGFDRLVMLAAGATSIDQVVWTPPAGEAS 351


>gi|91976977|ref|YP_569636.1| lysine--tRNA ligase [Rhodopseudomonas palustris BisB5]
 gi|91683433|gb|ABE39735.1| Lysine--tRNA ligase [Rhodopseudomonas palustris BisB5]
          Length = 351

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 46/119 (38%), Gaps = 12/119 (10%)

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R+LD         +  R+ +  + R    A  F E  T IL  S P        P    +
Sbjct: 15  RYLD-----RKPFLRARSAVTRAARDWFAAAEFAEVETAILQLS-PGNETHLHAPRTEFK 68

Query: 189 GSF-----YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
           G         L  +P+   + L+A+G +R F+ A  FRD + R      EF  L+   +
Sbjct: 69  GPDGELRTRFLRTSPEFACKKLLAAGEERIFEFARVFRDRE-RGRLHLPEFTMLEWYRA 126



 Score = 45.1 bits (105), Expect = 0.042,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 5/108 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +  P+  +   K +D     A ++++   G E+A+G      +      F+     KE  
Sbjct: 240 YPAPEAALARTKADDPR--VAERFEVYACGVELANGFGELTDAAEQRLRFTASMDEKERR 297

Query: 519 ENRFGGLYRAFQCG---MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 L   F      MP   G+A G DR+VML  GA  + +V   P
Sbjct: 298 YGERYPLDEDFLAAVGRMPEASGVALGFDRLVMLAAGAMRIDQVVWTP 345


>gi|299769067|ref|YP_003731093.1| putative lysyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298699155|gb|ADI89720.1| putative lysyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 324

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 51/121 (42%), Gaps = 4/121 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAPQQY 201
           R ++ N +R      + +E  TPI++ +       A    +     +     L  +P+  
Sbjct: 17  RAKLYNQIRHFFAERDVMEVETPIVSQAGVTDVHLASVQALRHINGKLQTQYLQTSPEFA 76

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ASG    +QI   FRD++    +   EF  L+     ++   +++   ++L+   
Sbjct: 77  MKRLLASGSGPIYQICKVFRDDEHG-RKHNSEFTMLEWYRPGLDLKALMHETADLLQSCL 135

Query: 262 E 262
           +
Sbjct: 136 Q 136



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           F      +  +K ++     A ++++   G E+A+       +EV+   F      +   
Sbjct: 213 FPPEMASLAKVKVDEDGEEVAARFEVYIEGLELANAYDELLDAEVLRSRFEADNAERAKQ 272

Query: 518 ---VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              V      L  A    MP   GIA GIDR++M+ +    + +V  FP
Sbjct: 273 GLHVMPLDEHLLAALPH-MPECSGIALGIDRLLMVAMDQVKIEKVITFP 320


>gi|71424612|ref|XP_812852.1| aspartyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70877681|gb|EAN91001.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 243

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 47/133 (35%), Gaps = 2/133 (1%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
           R+ G V   R  G I F+ +R     +  V    +      K +  E ++   G ++   
Sbjct: 48  RIRGRVETTRVRGKIAFIHLRQPPCHSIQVVASAADIVRRVKELTPESIIDATGTLVPAE 107

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKN 141
               +A+      EL A++++++S A         +       R  +R + +R       
Sbjct: 108 RPVTSASCKN--YELHAERVDVVSRAATPLPFPIKDCNTRLDTRLNHRVMGMRTPLAASV 165

Query: 142 IVKRTRIINSMRC 154
           +   +    +  C
Sbjct: 166 LRLVSAHARACLC 178


>gi|310823466|ref|YP_003955824.1| lysyl-tRNA synthetase-like protein genx [Stigmatella aurantiaca
           DW4/3-1]
 gi|309396538|gb|ADO73997.1| lysyl-tRNA synthetase-like protein GenX [Stigmatella aurantiaca
           DW4/3-1]
          Length = 345

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 5/108 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +      +  LK  D     A + +L   G E+A+G      +      F      +  +
Sbjct: 235 YPASMASLSRLKPGDPS--VAERVELYAKGLELANGFSELTDAVEQRARFVEEQALRRAL 292

Query: 519 ENRFGGLYRAF--QCG-MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 L   F    G MPP  GIA G+DRI+MLL+GA ++ +V LFP
Sbjct: 293 GRTVYPLDERFLEAVGRMPPAAGIAVGLDRILMLLMGAGSITDVLLFP 340



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 9/126 (7%)

Query: 133 LRRDTLH-KNIVKRTRIINSMRCRMIAENFIECSTPILTASSP------EGARDFLVPSR 185
           L  + +  +    R  +  ++R   + + ++E  TP+L  +             F+  + 
Sbjct: 10  LMPNPVQWRAAFGRQMLYAALRRFFMGQGYLEVETPLLIPTPGMEPHITAFEVPFVPETD 69

Query: 186 VNQGSFYALPQAPQQYKQLLMA-SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           V Q     L  +P+   + ++A       FQI   FR+ +      P EF  L+     V
Sbjct: 70  VGQARPLYLHTSPEYAMKRMLADGAHGPLFQICKVFRNGEVSVTHNP-EFTMLEFYRPHV 128

Query: 245 EQDDIL 250
           +   I+
Sbjct: 129 DYHAIM 134


>gi|149003236|ref|ZP_01828132.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147758696|gb|EDK65693.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 72

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 4/76 (5%)

Query: 496 IRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
           +R    + ++     +G+ +   E          + G  PHGG   GI+R+V    G K+
Sbjct: 1   MREEDYDALVAKMDELGMDRTEYE----FYLDLRKYGTVPHGGFGIGIERMVTFAAGTKH 56

Query: 556 VREVSLFPMSQNFCDL 571
           +RE   FP   +    
Sbjct: 57  IREAIPFPRMLHRIKP 72


>gi|296114566|ref|ZP_06833219.1| lysyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978922|gb|EFG85647.1| lysyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 339

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 9/147 (6%)

Query: 148 IINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS--FYALPQAPQQYKQ 203
           ++  +R       ++E  TP    +  E    + F        G+     L  +P+   +
Sbjct: 27  VVRGVRAFFEGRGYLEVETPYAVPTPGEEVHLKVFRTEQHRPDGTVRPLFLHTSPEFAMK 86

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            ++A+     FQ+A  +R+ +  S     EF  L+         D+++  E +LR +   
Sbjct: 87  RIVAATHLPVFQMARVWRNAE-GSRLHAHEFTMLEWYRPHASLSDLMDETEALLRAILPP 145

Query: 264 FS----NGNTVSNNFLRICYDDAIRRY 286
                 +   ++  F R+   DA  RY
Sbjct: 146 VLPGAASRVAMTPPFERLTMADAFARY 172



 Score = 50.5 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 8/109 (7%)

Query: 460 TMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           T       +L   D    + A +++L  +G E+A+              F      +   
Sbjct: 226 THWPASQAALARRDPADPRVALRFELYADGIELANAFEELTDPVEQEARFMADRARRADL 285

Query: 518 ------VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
                         + A    MP   GIA G+DR+VML  G + + +V 
Sbjct: 286 YGDDPQATWPMDHAFLAAVGNMPSCVGIALGLDRLVMLAAGTRRIEDVL 334


>gi|221134000|ref|ZP_03560305.1| lysyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 328

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 31/137 (22%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
             C++ DFP                     Q  +  LK ++     A ++++   G E+A
Sbjct: 211 RPCFVYDFP-------------------ASQAALARLKADEPG--YAHRFEVYYKGLELA 249

Query: 493 SGGIRNHMSEVMLQAFSNVG-------ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
           +G       +   Q F+          +    ++ R   L  A   G+P   G+A G+DR
Sbjct: 250 NGYWELTDPKEQAQRFAKDNRYRNKLGLPNTTIDTR---LMAALNAGLPDCAGVALGVDR 306

Query: 546 IVMLLLGAKNVREVSLF 562
           ++ML LG K++ +V  F
Sbjct: 307 LIMLALGKKHINDVLSF 323



 Score = 60.9 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 82/237 (34%), Gaps = 20/237 (8%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRV-NQGS 190
           R D    N+ +R  II  +R      + +E   P+L+          +F+ P  + N+ +
Sbjct: 15  RMDISPDNLRRRAAIIAQIRHFFAHLDVLEVDVPVLSQFGVTDPHLSNFVTPFTLGNKVT 74

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  +P+   + ++ASG    + +   FR ED      P EF  L+      +   ++
Sbjct: 75  SLYLQTSPEYGMKRMLASGSGCIYYMGKSFRHEDAGHQHNP-EFTMLEWYRIGFDDHALM 133

Query: 251 NTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
             ++ +L+G+          +    ++ Y +A  ++     +  N   +        H +
Sbjct: 134 LEVDALLQGIL--------NTEPADKMTYHEAFLQFADIDINHANKDDLIAALAIDTHYD 185

Query: 311 FRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFWRLDESG 367
               S    +   + +   P  GG            +         A    + DE G
Sbjct: 186 LSCESIEHILQLIFNLHIEPNIGGSRPC--------FVYDFPASQAALARLKADEPG 234


>gi|14590195|ref|NP_142260.1| asparagine synthetase A [Pyrococcus horikoshii OT3]
 gi|3256659|dbj|BAA29342.1| 294aa long hypothetical asparaginyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 294

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 93/238 (39%), Gaps = 24/238 (10%)

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTA--------SSPEGARDFLVPS 184
           +    ++K I  +TRI++ M    + + F      +L+          + EG +   V  
Sbjct: 6   IISRDIYKVIDIQTRILDYMTKYFLGKGFKWLLPVMLSPITDPLWPDPAEEGVKPLEVEV 65

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD--RLPGEFYQLDMEMS 242
               G    L  +   +KQL +A G  + F ++P  R E    D  +   EF Q D E+ 
Sbjct: 66  Y---GKKMRLTHSMILHKQLAIAMGLKKIFVLSPNIRIETRERDDGKHAYEFTQFDFEVE 122

Query: 243 FVEQDDILNTMENVLRGVFEEFSNGN----TVSNNFLRICYDDAIRRYGTDKPD---LRN 295
             +  DI++ +E ++ G+F +           + +F    Y D +  +G+D+     +  
Sbjct: 123 GAKMKDIISLVEELMHGLFRKAEEWTGRDFPKARHFKVYEYKDILDEFGSDEKASQVMEE 182

Query: 296 PIIMHNV-TEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
           P  + N+  E +   E  V+     + P      +    GG       ++ E  R+ G
Sbjct: 183 PFWVINIPREFYDREEDGVWRNYDLILPYGYGEVL---SGGEREWEYQKIIEKIRASG 237



 Score = 46.2 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 49/125 (39%), Gaps = 11/125 (8%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCN---GFEIASGGIRNHM 500
           E+  +EK       PF +     E     +    +   YDL+     G  ++ G      
Sbjct: 169 EFGSDEKASQVMEEPFWVINIPREFYDREEDGVWR--NYDLILPYGYGEVLSGGEREWEY 226

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCG-MPPHGGIAAGIDRIVMLLLGAKNVREV 559
            +++ +  ++      + E  F       + G + P  G   G++R+V  ++ A +V EV
Sbjct: 227 QKIIEKIRAS-----GLSEESFKPYLEIARAGKLKPSAGAGIGVERLVRFIVSAHHVSEV 281

Query: 560 SLFPM 564
            LFP 
Sbjct: 282 QLFPR 286


>gi|260549297|ref|ZP_05823517.1| lysyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260407703|gb|EEX01176.1| lysyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 333

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAPQQY 201
           R ++   +R        +E  TP+++ +       A    +     +     L  +P+  
Sbjct: 26  RAKLYTQIRQFFAERGVMEVETPVVSQAGVTDVHLASVQALRHINGKLQTQYLQTSPEFA 85

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ASG    +QI   FRD++    +   EF  L+     ++   +++   ++L+   
Sbjct: 86  MKRLLASGSGPIYQICKVFRDDEHG-RKHNSEFTMLEWYRPGLDLKALMHETADLLQTCL 144

Query: 262 E 262
           +
Sbjct: 145 Q 145



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F      +  +K ++     A ++++   G E+A+       ++V+   F      +   
Sbjct: 222 FPPEMASLAKVKVDEDGEEVAARFEVYIEGLELANAYDELLDADVLRSRFEADNAERAKQ 281

Query: 519 ENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                     L  A    MP   GIA GIDR++M+      + +V  FP
Sbjct: 282 GLHVVPLDEYLLAALPH-MPECSGIALGIDRLLMVATEQLKIEKVIAFP 329


>gi|148361403|gb|ABQ59283.1| putative lysyl-tRNA synthetase [Mycoplasma gateae]
          Length = 224

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            +  +  G +R ++I   FR+E   S   P EF  ++   ++ +   ++   E V + + 
Sbjct: 1   LKKCIVGGLERVYEIGRIFRNEGVDSTHNP-EFTSIEFYEAYSDMWGMMERTEGVFKHLT 59

Query: 262 EEF 264
           ++ 
Sbjct: 60  QKL 62


>gi|319784265|ref|YP_004143741.1| lysyl-tRNA synthetase-related protein GenX [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317170153|gb|ADV13691.1| lysyl-tRNA synthetase-related protein GenX [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 346

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 42/116 (36%), Gaps = 5/116 (4%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPSRVNQG---SFYAL 194
              ++ R  I   +R    A +F+E  T  L  S   E          V      +   L
Sbjct: 17  RPRLMLRNGIAAGLRDWFAAHDFVEVQTAALQVSPGNEAHLAAFATEAVGPDGARAPLYL 76

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
             +P+   + L+A+G  R F   P +R+ +      P EF  L+        + ++
Sbjct: 77  HTSPEFACKKLIAAGETRIFSFGPVYRNRERGPLHHP-EFTMLEWYRVGEAYESLM 131



 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFS-NVGISKEVVENRF---GGLYRAFQCGMP 534
           A +++L C G E+A+G      ++   + F   +   + +   R+        A    MP
Sbjct: 257 AERFELYCCGVELANGFGELTDADEQRRRFVTEMDEKQRIYGERYPLDEDFLSALAI-MP 315

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           P  GIA G DR+ ML  GA+ + +V   P
Sbjct: 316 PASGIALGFDRLAMLATGAQKIEDVIWTP 344


>gi|323519144|gb|ADX93525.1| putative lysyl-tRNA synthetase (lysine--tRNA ligase)(PoxA)
           [Acinetobacter baumannii TCDC-AB0715]
          Length = 333

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAPQQY 201
           R ++   +R        +E  TPI++ +       A    +     +     L  +P+  
Sbjct: 26  RAKLYTQIRQFFAEREVMEVETPIVSQAGVTDVHLASVQALRHINGKLQTQYLQTSPEFA 85

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ASG    +QI   FRD++    +   EF  L+     ++   +++   ++L+   
Sbjct: 86  MKRLLASGSGPIYQICKVFRDDEHG-RKHNSEFTMLEWYRPGLDLKALMHETADLLQTCL 144

Query: 262 E 262
           +
Sbjct: 145 Q 145



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F      +  +K ++     A ++++   G E+A+       S+V+   F      +   
Sbjct: 222 FPPEMASLAKVKLDEDGEEVAARFEVYIEGLELANAYDELLDSDVLRSRFEADNAERAKQ 281

Query: 519 ENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                     L  A    MP   GIA GIDR++M+      + +V  FP
Sbjct: 282 GLHIMPLDEHLLAALSH-MPECSGIALGIDRLLMVATDQLKIEKVIAFP 329


>gi|260556494|ref|ZP_05828712.1| lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260409753|gb|EEX03053.1| lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 333

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAPQQY 201
           R ++   +R        +E  TP+++ +       A    +     +     L  +P+  
Sbjct: 26  RAKLYTQIRQFFAERGVMEVETPVVSQAGVTDVHLASVQALRHINGKLQTQYLQTSPEFA 85

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ASG    +QI   FRD++    +   EF  L+     ++   +++   ++L+   
Sbjct: 86  MKRLLASGSGPIYQICKVFRDDEHG-RKHNSEFTMLEWYRPGLDLKALMHETADLLQTCL 144

Query: 262 E 262
           +
Sbjct: 145 Q 145



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           F      +  +K ++     A ++++   G E+A+       S+V+   F      +   
Sbjct: 222 FPPEMASLAKVKLDEDGEEVAARFEVYIEGLELANAYDELLDSDVLRSRFEADNAERAKQ 281

Query: 518 ---VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              V      L  A    MP   GIA G+DR++M+      + +V  FP
Sbjct: 282 GLHVMPLDEHLLAALPH-MPECSGIALGVDRLLMVATDQLKIEKVIAFP 329


>gi|53804592|ref|YP_113781.1| hypothetical protein MCA1319 [Methylococcus capsulatus str. Bath]
 gi|53758353|gb|AAU92644.1| conserved hypothetical protein TIGR00462 [Methylococcus capsulatus
           str. Bath]
          Length = 329

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 3/135 (2%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG--ARDFLVPSRVNQG 189
           D R       + +R  ++  +R        +E  TP+L+  +        F V    +  
Sbjct: 8   DWRPSCPPAMLRRRAELLRKIRRFFAEREVLEVETPLLSHGTVTDPHLSVFSVGGGSDGS 67

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
           S   L  +P+   + L+A+G    +QI   FR ++      P EF  L+        D++
Sbjct: 68  SRLFLQTSPEFAMKRLLAAGSGSIYQICKAFRRDESGRFHNP-EFTLLEWYRVGFGLDEL 126

Query: 250 LNTMENVLRGVFEEF 264
           +   + +L+ + E  
Sbjct: 127 IEETDALLQVLSENI 141



 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 450 KKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS 509
            +  F  + F      +   K +D   +   + ++  +G E+ +G             F 
Sbjct: 211 GRFTFVRD-FPAILPSLARFKPDDERLV--ERVEVFLDGLELGNGFFELSDPLEQEYRFD 267

Query: 510 NVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               ++         +   L  A + G+P   GIA GIDR+++ L     + +   FP
Sbjct: 268 RDIAARIDAGLPVPEKDRRLLDALKAGLPDCAGIALGIDRLLLGLHRLDAIADTLAFP 325


>gi|301168360|emb|CBW27950.1| putative lysyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 329

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 4/117 (3%)

Query: 152 MRCRMIAENFIECSTPILTASSP-EGARDFLVP--SRVNQGSFYALPQAPQQYKQLLMAS 208
           +R   +   FI+  TP +  +   E              +     L  +P+ + + L++ 
Sbjct: 21  IRDFFLEREFIDVLTPPMVQNPGMETHIHPFQVRSPHNKENLELYLHTSPEFHMKELLSL 80

Query: 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFS 265
           GF + + I+ CFRDE   S     +F  L+   +      I+   E++ +   E+  
Sbjct: 81  GFSKIYNISYCFRDEP-NSTHHRPQFLMLEWYRTQEFYTTIMKDTEDLFKYCCEKML 136


>gi|188992084|ref|YP_001904094.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167733844|emb|CAP52050.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris]
          Length = 324

 Score = 63.2 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 47/120 (39%), Gaps = 6/120 (5%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPS---RVNQGSFYA-LPQA 197
             R R+   +R        +E  TP+L+A+   E   +         V+ G+    L  +
Sbjct: 16  RLRARLNALIRGFFAERAVLEVETPVLSAAGNTEPNIESFSTRFSGHVDAGAPTRWLRTS 75

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+   + L+A+G    +++   FR+ +      P EF  L+      +   + N    ++
Sbjct: 76  PEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNP-EFSMLEWYRVGWDHRALANETIALI 134



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 11/91 (12%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVML-------QAFSNVGISKEVVENRFGGLYRAFQC 531
           A +++L    +E+A+G    + +           Q  +  G+    ++ R   L +A   
Sbjct: 233 AERFELYLGAYEVANGYHELNDAHEQRMRFERDNQRRAARGLPPLPLDER---LLQALPQ 289

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +P   G+A G+DR++M + G   + +V  F
Sbjct: 290 -LPDCAGVAVGVDRLLMAMRGTTQIADVLAF 319


>gi|116254325|ref|YP_770163.1| lysyl-tRNA synthetase-like protein [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115258973|emb|CAK10082.1| putative lysyl-tRNA synthetase homolog [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 353

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 9/133 (6%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP------EGARDFLVPSRVNQGSFY 192
              ++ R  I  ++R     E+FIE  T +L  S          A + L      Q + +
Sbjct: 20  RPFLIGRNAIQAALRGFFAREDFIEVDTAVLQVSPGNEAHLHAFATEALTTD--GQKAPF 77

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+   + L+A+G +R    A  +R+ +      P EF  L+   +    + ++  
Sbjct: 78  YLHTSPEFACKKLLAAGEERISCFAHVYRNRERGPLHHP-EFTMLEWYRAGESYESLMMD 136

Query: 253 MENVLRGVFEEFS 265
              +L    E   
Sbjct: 137 CVRILALATETVK 149



 Score = 49.7 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 39/105 (37%), Gaps = 7/105 (6%)

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           +  +     +D     A +++L   G E+A+G      +    + F      K  V    
Sbjct: 246 EAALARPSAHDPR--VAERFELYACGVELANGFGELTNAAEQRRRFEIEMAEKARVYGET 303

Query: 523 ----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                    A    MP   GIA G DR+VML  GA  + +V   P
Sbjct: 304 YPIDEDFLAALPL-MPEASGIALGFDRLVMLATGASRIDQVLWAP 347


>gi|169795015|ref|YP_001712808.1| putative lysyl-tRNA synthetase (lysine--tRNA ligase)(PoxA)
           [Acinetobacter baumannii AYE]
 gi|169147942|emb|CAM85805.1| putative lysyl-tRNA synthetase (Lysine--tRNA ligase)(PoxA)
           [Acinetobacter baumannii AYE]
          Length = 333

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAPQQY 201
           R ++   +R        +E  TP+++ +       A    +     +     L  +P+  
Sbjct: 26  RAKLYTQIRQFFAERGVMEVETPVVSQAGVTDVHLASVQALRHINGKLQTQYLQTSPEFA 85

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ASG    +QI   FRD++    +   EF  L+     ++   +++   ++L+   
Sbjct: 86  MKRLLASGSGPIYQICKVFRDDEHG-RKHNSEFTMLEWYRPGLDLKALMHETADLLQTCL 144

Query: 262 E 262
           +
Sbjct: 145 Q 145



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F      +  +K ++     A ++++   G E+A+       S+V+   F      +   
Sbjct: 222 FPPEMASLAKVKLDEDGEEVAARFEVYIEGLELANAYDELLDSDVLRSRFEADNAERAKQ 281

Query: 519 ENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                     L  A    MP   GIA GIDR++M+      + +V  FP
Sbjct: 282 GLHIMPLDEHLLAALPH-MPECSGIALGIDRLLMVATDQLKIEKVIAFP 329


>gi|21231025|ref|NP_636942.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66768970|ref|YP_243732.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|21112649|gb|AAM40866.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66574302|gb|AAY49712.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 324

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 47/120 (39%), Gaps = 6/120 (5%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPS---RVNQGSFYA-LPQA 197
             R R+   +R        +E  TP+L+A+   E   +         V+ G+    L  +
Sbjct: 16  RLRARLNALIRGFFAERAVLEVETPVLSAAGNTEPNIESFSTRFSGHVDAGAPTRWLRTS 75

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+   + L+A+G    +++   FR+ +      P EF  L+      +   + N    ++
Sbjct: 76  PEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNP-EFSMLEWYRVGWDHRALANETIALI 134



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 48/113 (42%), Gaps = 13/113 (11%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML-------QAFS 509
           + +   Q  +  ++ +      A +++L    +E+A+G    + +           Q  +
Sbjct: 213 HDWPASQCALARIRNDTPP--VAERFELYLGAYEVANGYHELNDAHEQRMRFERDNQRRA 270

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             G+    ++ R   L +A    +P   G+A G+DR++M + G   + +V  F
Sbjct: 271 ARGLPPLPLDER---LLQALPQ-LPDCAGVAVGVDRLLMAMRGTTQIADVLAF 319


>gi|169632670|ref|YP_001706406.1| putative lysyl-tRNA synthetase (lysine--tRNA ligase)(PoxA)
           [Acinetobacter baumannii SDF]
 gi|169151462|emb|CAP00211.1| putative lysyl-tRNA synthetase (Lysine--tRNA ligase)(PoxA)
           [Acinetobacter baumannii]
          Length = 333

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAPQQY 201
           R ++   +R        +E  TP+++ +       A    +     +     L  +P+  
Sbjct: 26  RAKLYTQIRQFFAERGVMEVETPVVSQAGVTDVHLASVQALRHINGKLQTQYLQTSPEFA 85

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ASG    +QI   FRD++    +   EF  L+     ++   +++   ++L+   
Sbjct: 86  MKRLLASGSGPIYQICKVFRDDEHG-RKHNSEFTMLEWYRPGLDLKALMHETADLLQTCL 144

Query: 262 E 262
           +
Sbjct: 145 Q 145



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 53/144 (36%), Gaps = 17/144 (11%)

Query: 424 LGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD 483
           + ++  + FE     D P +  +            F      +  +K ++     A +++
Sbjct: 199 MDLLFSHFFEPSLGFDAPVFLTD------------FPPEMASLAKVKLDEDGEEVAARFE 246

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMPPHGGI 539
           +   G E+A+       S+V+   F      +      V      L  A    MP   GI
Sbjct: 247 VYIEGLELANAYDELLDSDVLRSRFEADNAERAKQGLHVMPLDEHLLAALPH-MPECSGI 305

Query: 540 AAGIDRIVMLLLGAKNVREVSLFP 563
           A G+DR++M+      + +V  FP
Sbjct: 306 ALGVDRLLMVATDQLKIEKVIAFP 329


>gi|296090491|emb|CBI40822.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 55/157 (35%), Gaps = 11/157 (7%)

Query: 32  PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIIT 91
             G +  L++ D      +    D+A   + + V+    + ++  +      T       
Sbjct: 25  SKGLLASLELNDGSYPANLQVIVDAALVPLGQLVQISTCVHVESSLKVPPEGTK------ 78

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKR--TRII 149
            ++E   +K+  +   +    P+   R   + +R    F+  R  T     V R    + 
Sbjct: 79  QRVEFRVEKVHHVGPVDPAKYPLPKTRLTLKFLRV---FVHFRSRTNMIPAVARICNALA 135

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV 186
            +         F+   TPI+T S  EGA +    + +
Sbjct: 136 YATHTFFQNHGFLHAHTPIITTSDCEGAGEMFRVTTL 172


>gi|297833532|ref|XP_002884648.1| asparaginyl-tRNA synthetase 2 [Arabidopsis lyrata subsp. lyrata]
 gi|297330488|gb|EFH60907.1| asparaginyl-tRNA synthetase 2 [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 3/88 (3%)

Query: 190 SFY---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+   A   +  ++     AS   + +   P F  +   + R   E + ++ EM+F E 
Sbjct: 370 DFFGRDAYLTSSGRFHLESYASALGKVYTFGPRFIADKIDNARHLAEMWSVETEMAFSEL 429

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNF 274
           DD ++  +   + + +           F
Sbjct: 430 DDAMDCADEYFKFLCKYILENRDEDMKF 457



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A  +DLV      + +G       E++    +  G+S+     +F       +
Sbjct: 542 NDDKKTVA-AFDLVVPKVGVVITGSQNEERFEILNARIAEFGLSR----EKFEWYLDLRR 596

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G   H GI+  ++++++   G  ++++   FP S
Sbjct: 597 HGTVKHSGISLSMEQMLLFATGLPDIKDAIPFPRS 631



 Score = 43.9 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 53/151 (35%), Gaps = 6/151 (3%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           + +  I D   I+ +    DSA   +  +       CI    + R     +A  +   IE
Sbjct: 139 VFYFLISDGSSISSLQVVVDSALSTVPATQLMALGTCIVAEGVLRLPLAASAKHV---IE 195

Query: 96  LSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155
           L A+K+  +   +    P+  ++  P  +   +     R  T+       + +  +    
Sbjct: 196 LEAEKLLHVGTVDPEKYPLSKKQL-PLHMLRDFSHFRPRTTTVGSVTRVHSALTLASHTF 254

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRV 186
           +    F     P++T ++  G  +    + +
Sbjct: 255 LQYHGFQYVQVPVITTTTGFG--EMFRVTTL 283


>gi|13476826|ref|NP_108395.1| lysyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|14027587|dbj|BAB53856.1| lysyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 348

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 49/126 (38%), Gaps = 5/126 (3%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
             E  E    I  A      P       + +   +  A +++L C G E+A+G      +
Sbjct: 220 MVEKIEPNLGIGRATILCEYPVAEAALARPSPHDARVAERFELYCCGVELANGFGELTDA 279

Query: 502 EVMLQAFS-NVGISKEVVENRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           E   + F   +   + +   R+        A    MP   GIA G DR+VML  GA+ + 
Sbjct: 280 EEQRRRFILEMDEKERIYGERYPLDEDFLAALAI-MPQASGIALGFDRLVMLATGAQKIE 338

Query: 558 EVSLFP 563
           +V   P
Sbjct: 339 DVIWTP 344



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 5/129 (3%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPSRVNQG---SFYAL 194
              ++ R  +  + R    A++FIE  T  L  S   E          V      +   L
Sbjct: 17  RPRLMLRNGLTAAFREWFAAQDFIEVETAALQVSPGNEAHLAAFATEAVGPDGARAPLYL 76

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+   + L+A+G  R F +   +R+ +      P EF  L+          ++    
Sbjct: 77  HTSPEFACKKLLAAGEVRIFSLGAVWRNRERGPLHHP-EFTMLEWYRVGETYGSLMRDCA 135

Query: 255 NVLRGVFEE 263
           ++L  V   
Sbjct: 136 DLLALVARR 144


>gi|184159200|ref|YP_001847539.1| truncated lysyl-tRNA synthetase (class II) [Acinetobacter baumannii
           ACICU]
 gi|332876030|ref|ZP_08443816.1| lysine--tRNA ligase-like protein GenX [Acinetobacter baumannii
           6014059]
 gi|183210794|gb|ACC58192.1| truncated lysyl-tRNA synthetase (class II) [Acinetobacter baumannii
           ACICU]
 gi|322509116|gb|ADX04570.1| PoxA [Acinetobacter baumannii 1656-2]
 gi|332735896|gb|EGJ66937.1| lysine--tRNA ligase-like protein GenX [Acinetobacter baumannii
           6014059]
          Length = 324

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAPQQY 201
           R ++   +R        +E  TPI++ +       A    +     +     L  +P+  
Sbjct: 17  RAKLYTQIRQFFAEREVMEVETPIVSQAGVTDVHLASVQALRHINGKLQTQYLQTSPEFA 76

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ASG    +QI   FRD++    +   EF  L+     ++   +++   ++L+   
Sbjct: 77  MKRLLASGSGPIYQICKVFRDDEHG-RKHNSEFTMLEWYRPGLDLKALMHETADLLQTCL 135

Query: 262 E 262
           +
Sbjct: 136 Q 136



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F      +  +K ++     A ++++   G E+A+       S+V+   F      +   
Sbjct: 213 FPPEMASLAKVKLDEDGEEVAARFEVYIEGLELANAYDELLDSDVLRSRFEADNAERAKQ 272

Query: 519 ENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                     L  A    MP   GIA GIDR++M+      + +V  FP
Sbjct: 273 GLHIMPLDEHLLAALSH-MPECSGIALGIDRLLMVATDQLKIEKVIAFP 320


>gi|15839144|ref|NP_299832.1| lysyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|9107767|gb|AAF85352.1|AE004063_1 lysyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 301

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 6/113 (5%)

Query: 152 MRCRMIAENFIECSTPILTASS-PEGARDFLVPSRVNQGSFYA----LPQAPQQYKQLLM 206
           +R        +E  TP+L+A+   E                 A    L  +P+   + L+
Sbjct: 2   IRGFFADRGVLEVETPLLSAAGNTEPNIHSFTTCFTGHCDAGAAQRWLRTSPEYPLKRLL 61

Query: 207 ASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
           A+G    +++   FR+ +      P EF  L+      +   +      ++R 
Sbjct: 62  AAGIGDCYELGRVFRNGEAGGRHNP-EFTMLEWYRVGWDHHRLAEETTALVRE 113



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 13/111 (11%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML-------QAFSNV 511
           +   Q  +  ++ +D     A +++L     EIA+G    + +           Q  +  
Sbjct: 192 WPATQCALARIRSDDPP--VAERFELYLGVHEIANGYHELNDATEQRRRFEHDNQVRAAR 249

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+ +  ++     +        P   G+A G+DR++M +    ++ +V  F
Sbjct: 250 GLPQMPLDEPLLNVLSRL----PDCAGVAVGVDRLLMAMSATASIADVMAF 296


>gi|325915466|ref|ZP_08177780.1| lysyl-tRNA synthetase (class II) [Xanthomonas vesicatoria ATCC
           35937]
 gi|325538348|gb|EGD10030.1| lysyl-tRNA synthetase (class II) [Xanthomonas vesicatoria ATCC
           35937]
          Length = 320

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 12/133 (9%)

Query: 131 LDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPS---RV 186
           LDL        +  R ++  ++R        +E  TPIL+ +   E   D         V
Sbjct: 6   LDL------AALQLRAQLNAAIRAFFAERGVLEVETPILSQAGNTEPNIDSFSTRFSGHV 59

Query: 187 NQGSFYA-LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
           + G     L  +P+   + L+A+G    +++   FR+ +      P EF  L+       
Sbjct: 60  DAGVPVRWLRTSPEYPLKRLLAAGLGDCYELGRVFRNGEAGGRHNP-EFSMLEWYRVGWN 118

Query: 246 QDDILNTMENVLR 258
              +      +++
Sbjct: 119 DRALAQETIALVQ 131



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 36/91 (39%), Gaps = 11/91 (12%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG-------ISKEVVENRFGGLYRAFQC 531
           A +++L    +E+A+G    + ++     F           + +  ++     +      
Sbjct: 229 AERFELYLGTYEVANGYHELNDAQEQRARFIRDNTVRALRGLPQLPLDEHLLAVLSQL-- 286

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             P   G+A G+DR++M L     + +V  F
Sbjct: 287 --PDCAGVAVGVDRLLMALCDTTQIADVLAF 315


>gi|325123135|gb|ADY82658.1| putative lysyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 324

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 50/121 (41%), Gaps = 4/121 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAPQQY 201
           R ++   +R      + +E  TPI++ +       A    +     +     L  +P+  
Sbjct: 17  RAKLYTQIRQFFAERDVMEVETPIVSQAGVTDVHLASVQALRHINGKLQTQYLQTSPEFA 76

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ASG    +QI   FRD++    +   EF  L+     ++   +++   ++L+   
Sbjct: 77  MKRLLASGSGPIYQICKVFRDDEHG-RKHNSEFTMLEWYRPGLDLKALMHETADLLQTCL 135

Query: 262 E 262
           +
Sbjct: 136 Q 136



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           F      +  +K ++     A ++++   G E+A+       ++V+   F      +   
Sbjct: 213 FPPEMASLAKVKVDEDGEEVAARFEVYIEGLELANAYDELLDADVLRSRFEVDNAERAKQ 272

Query: 518 ---VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              V      L  A    MP   GIA G+DR++M+ +    + +V  FP
Sbjct: 273 GLHVMPLDEHLLAALPH-MPECSGIALGVDRLLMVAMDHVKIEKVVTFP 320


>gi|213158322|ref|YP_002320373.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215482563|ref|YP_002324753.1| Lysyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|301345392|ref|ZP_07226133.1| putative lysyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301511594|ref|ZP_07236831.1| putative lysyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301594786|ref|ZP_07239794.1| putative lysyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|332854287|ref|ZP_08435287.1| lysine--tRNA ligase-like protein GenX [Acinetobacter baumannii
           6013150]
 gi|332865663|ref|ZP_08436489.1| lysine--tRNA ligase-like protein GenX [Acinetobacter baumannii
           6013113]
 gi|213057482|gb|ACJ42384.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213987161|gb|ACJ57460.1| Lysyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|332728103|gb|EGJ59492.1| lysine--tRNA ligase-like protein GenX [Acinetobacter baumannii
           6013150]
 gi|332735184|gb|EGJ66264.1| lysine--tRNA ligase-like protein GenX [Acinetobacter baumannii
           6013113]
          Length = 324

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAPQQY 201
           R ++   +R        +E  TP+++ +       A    +     +     L  +P+  
Sbjct: 17  RAKLYTQIRQFFAERGVMEVETPVVSQAGVTDVHLASVQALRHINGKLQTQYLQTSPEFA 76

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ASG    +QI   FRD++    +   EF  L+     ++   +++   ++L+   
Sbjct: 77  MKRLLASGSGPIYQICKVFRDDEHG-RKHNSEFTMLEWYRPGLDLKALMHETADLLQTCL 135

Query: 262 E 262
           +
Sbjct: 136 Q 136



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F      +  +K ++     A ++++   G E+A+       S+V+   F      +   
Sbjct: 213 FPPEMASLAKVKLDEDGEEVAARFEVYIEGLELANAYDELLDSDVLRSRFEADNAERAKQ 272

Query: 519 ENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                     L  A    MP   GIA GIDR++M+      + +V  FP
Sbjct: 273 GLHIMPLDEHLLAALPH-MPECSGIALGIDRLLMVATDQLKIEKVIAFP 320


>gi|193078112|gb|ABO13053.2| putative lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 324

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAPQQY 201
           R ++   +R        +E  TP+++ +       A    +     +     L  +P+  
Sbjct: 17  RAKLYTQIRQFFAERGVMEVETPVVSQAGVTDVHLASVQALRHINGKLQTQYLQTSPEFA 76

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ASG    +QI   FRD++    +   EF  L+     ++   +++   ++L+   
Sbjct: 77  MKRLLASGSGPIYQICKVFRDDEHG-RKHNSEFTMLEWYRPGLDLKALMHETADLLQTCL 135

Query: 262 E 262
           +
Sbjct: 136 Q 136



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           F      +  +K ++     A ++++   G E+A+       ++V+   F      +   
Sbjct: 213 FPPEMASLAKVKLDEDGEEVAARFEVYIEGLELANAYDELLDADVLRSRFEADNAERAKQ 272

Query: 518 ---VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              V      L  A    MP   GIA G+DR++M+      + +V  FP
Sbjct: 273 GLHVMPLDEHLLAALPH-MPECSGIALGVDRLLMVATDQLKIEKVIAFP 320


>gi|297182913|gb|ADI19063.1| truncated, possibly inactive, lysyl-tRNA synthetase (class II)
           [uncultured delta proteobacterium HF0070_07E19]
          Length = 259

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 4/122 (3%)

Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
           W+E EK + +             +       +  A + +    G EIA+G          
Sbjct: 132 WDELEKTLGWERPCLVTDWPPQLASLAQHNPNGFAERVECYVQGMEIANGFGELTDPNEQ 191

Query: 505 LQAFSNVGISKEVV---ENRFGG-LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            + F    I +  V   +         + + GMPP  G+A GI+R+++ LL   ++  V 
Sbjct: 192 RKRFEIELIHRNQVGKLDVALDHQFLDSLKEGMPPSCGMALGIERLLIWLLDVPSIANVM 251

Query: 561 LF 562
            F
Sbjct: 252 AF 253



 Score = 43.5 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
            + ++  GF++ +QI  C+R ++      P EF  L+          +   ++ + R +
Sbjct: 1   MKRMLVGGFEKIYQINACYRGKEVGYWHNP-EFTMLEWYRVGENWQRLCQDLQELTRYL 58


>gi|114327752|ref|YP_744909.1| lysyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114315926|gb|ABI61986.1| lysyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 341

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 67/203 (33%), Gaps = 24/203 (11%)

Query: 369 VAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIIN 428
           V+  G + +                   D       D     S AA  R        +  
Sbjct: 153 VSSGGVITRIEEPEILTVAEAFTRYTGAD--VLATADNAPALSEAAGVR--------LRE 202

Query: 429 CNCFEFCWIMDFPFY----EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL 484
              +E  +   F       E +   ++  F  + + + Q  +     ND     A +++L
Sbjct: 203 GEGWEDLF---FRLLLDRIEPHLGRERPTFLTH-WPVAQAALARPCPNDPR--VAERFEL 256

Query: 485 VCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMPPHGGIA 540
              G E+A+  +    +E   + F      ++ +  +          A   GMP   GIA
Sbjct: 257 FVCGIELANAFVELTDAEEQRRRFLIDRSRRQALGGQTWPLDEDFLAALAFGMPQAAGIA 316

Query: 541 AGIDRIVMLLLGAKNVREVSLFP 563
            G DR+ ML  GA  +++V   P
Sbjct: 317 MGFDRLAMLASGADRIQQVQWLP 339



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 5/111 (4%)

Query: 155 RMIAENFIECSTPI-LTASSPEGARDFLVPSRVNQG---SFYALPQAPQQYKQLLMASGF 210
              A +++E  TP  + A   E         R+      +   L  +P+   + L+ +G 
Sbjct: 40  FFEARSYLEVETPCAVLAPGEEVHLQAFRTERIGVDGVVTPLWLHTSPEFAMKRLLVAGA 99

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
              FQ+A  +R+ +  + R   EF  L+         D++     +L  V 
Sbjct: 100 GPIFQMARVWRNGEGSA-RHAAEFTMLEWYRPGSSMTDLIAETMELLCSVL 149


>gi|15231463|ref|NP_187398.1| NS2; asparagine-tRNA ligase [Arabidopsis thaliana]
 gi|20140328|sp|Q9SW95|SYNC2_ARATH RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic 2; AltName:
           Full=Asparagine--tRNA ligase 2; Short=AsnRS 2
 gi|6041857|gb|AAF02166.1|AC009853_26 putative asparaginyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332641019|gb|AEE74540.1| asparaginyl-tRNA synthetase, cytoplasmic 2 [Arabidopsis thaliana]
          Length = 638

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 32/88 (36%), Gaps = 3/88 (3%)

Query: 190 SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+       A  ++     AS   + +   P F  +   + R   E + ++ EM+F E 
Sbjct: 371 DFFGRDTYLTASGRFHLESYASALGKVYTFGPRFIADKIDNARHLAEKWNVETEMAFAEL 430

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNF 274
           DD ++  +   + + +           F
Sbjct: 431 DDAMDCADEYFKFLCKYVLENRDEDMKF 458



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 6/95 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A  +DLV      + +G       E++       G ++     +F       +
Sbjct: 543 NDDKKTVA-AFDLVVPKVGVVITGSQNEERFEILDARIGESGFTR----EKFEWYLDLRR 597

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G   H GI+  ++++++   G  ++++   FP S
Sbjct: 598 HGTVKHSGISLSMEQMLLYATGLPDIKDAIPFPRS 632



 Score = 44.3 bits (103), Expect = 0.063,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 53/152 (34%), Gaps = 6/152 (3%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           + +  I D   I+ +    DSA   +  +       CI    + R     +A  +   IE
Sbjct: 139 VFYFLISDGSSISSLQVVVDSALSTVPATQLMALGTCIVAEGVLRLPLAASAKHV---IE 195

Query: 96  LSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155
           L A+K+  +   +    P+  ++  P  +   +     R  T+       + +  +    
Sbjct: 196 LEAEKLLHVGTVDPEKYPLSKKQL-PLHMLRDFSHFRPRTTTVGSVTRVHSALTLASHTF 254

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +    F     P++T ++  G  +    + + 
Sbjct: 255 LQYHGFQYVQVPVITTTTGFG--EMFRVTTLL 284


>gi|213579940|ref|ZP_03361766.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. E98-0664]
          Length = 35

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/34 (52%), Positives = 21/34 (61%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIF 38
          RT  CG L +S VG  V L GWV+R R  G +IF
Sbjct: 2  RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIF 35


>gi|76155369|gb|AAX26647.2| SJCHGC05996 protein [Schistosoma japonicum]
          Length = 224

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 5/94 (5%)

Query: 15  SDVGSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
           + +   V + GWVHR+R     ++F+ +RD  G  Q +   +    + A ++  E  + +
Sbjct: 121 TMIDQRVCVFGWVHRIRRQSKTLMFIILRDGTGFLQCIFANNLCLTQEAITLSPESTVKV 180

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
            G+V    A         G IEL A    ++  A
Sbjct: 181 YGVVKQLPAG----KSAPGGIELVADYWMVIGNA 210


>gi|227824115|ref|YP_002828088.1| lysyl-tRNA synthetase protein [Sinorhizobium fredii NGR234]
 gi|227343117|gb|ACP27335.1| lysyl-tRNA synthetase protein [Sinorhizobium fredii NGR234]
          Length = 350

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 5/116 (4%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPSRVNQG---SFYAL 194
              ++ R RI +++R      +FIE  T  L  S   E          +          L
Sbjct: 17  RPFLIGRNRIQSALRRFFGERDFIEVDTATLQVSPGNEAHLHAFATQALGPDGSVQPLYL 76

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
             +P+   + L+A+G  R    A  +R+ +      P EF  L+   +    + ++
Sbjct: 77  HTSPEFACKKLVAAGERRIACFAHVYRNRERGPLHHP-EFTMLEWYRAEETYETLM 131



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 51/192 (26%), Gaps = 13/192 (6%)

Query: 378 HLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFEFCW- 436
            L                 D    I  D        A A       L +   + +   + 
Sbjct: 160 FLEPERLSVADAFARFAGIDLLASIGKDGDTDRESLAAAMREAG--LRVAEDDTWADLFS 217

Query: 437 -IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGG 495
            +      E  E    +  A      P       +        A +++L   G E+A+  
Sbjct: 218 RV----LVEKVEPNLGMGRATILDEYPAAEAALARPTPRDRRVAERFELYACGVELANAF 273

Query: 496 IRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                +    + F      K                A    MP   GIA G DR+VML  
Sbjct: 274 GELTDATEQRRRFELEMAEKARVYGETYPLDEDFLAALAL-MPEASGIALGFDRLVMLAT 332

Query: 552 GAKNVREVSLFP 563
           GA  + +V   P
Sbjct: 333 GAARIDQVLWAP 344


>gi|26449530|dbj|BAC41891.1| putative asparaginyl-tRNA synthetase [Arabidopsis thaliana]
 gi|29028996|gb|AAO64877.1| At3g07420 [Arabidopsis thaliana]
          Length = 638

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 32/88 (36%), Gaps = 3/88 (3%)

Query: 190 SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+       A  ++     AS   + +   P F  +   + R   E + ++ EM+F E 
Sbjct: 371 DFFGRDTYLTASGRFHLESYASALGKVYTFGPRFIADKIDNARHLAEKWNVETEMAFAEL 430

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNF 274
           DD ++  +   + + +           F
Sbjct: 431 DDAMDCADEYFKFLCKYVLENRDEDMKF 458



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 6/95 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A  +DLV      + +G       E++       G ++     +F       +
Sbjct: 543 NDDKKTVA-AFDLVVPKVGVVITGSQNEERFEILDARIGESGFTR----EKFEWYLDLRR 597

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G   H GI+  ++++++   G  ++++   FP S
Sbjct: 598 HGTVKHSGISLSMEQMLLYATGLPDIKDAIPFPRS 632



 Score = 44.3 bits (103), Expect = 0.064,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 53/152 (34%), Gaps = 6/152 (3%)

Query: 36  IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIE 95
           + +  I D   I+ +    DSA   +  +       CI    + R     +A  +   IE
Sbjct: 139 VFYFLISDGSSISSLQVVVDSALSTVPATQLMALGTCIVAEGVLRLPLAASAKHV---IE 195

Query: 96  LSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCR 155
           L A+K+  +   +    P+  ++  P  +   +     R  T+       + +  +    
Sbjct: 196 LEAEKLLHVGTVDPEKYPLSKKQL-PLHMLRDFSHFRPRTTTVGSVTRVHSALTLASHTF 254

Query: 156 MIAENFIECSTPILTASSPEGARDFLVPSRVN 187
           +    F     P++T ++  G  +    + + 
Sbjct: 255 LQYHGFQYVQVPVITTTTGFG--EMFRVTTLL 284


>gi|239504301|ref|ZP_04663611.1| putative lysyl-tRNA synthetase (lysine--tRNA ligase)(PoxA)
           [Acinetobacter baumannii AB900]
          Length = 324

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAPQQY 201
           R ++   +R        +E  TP+++ +       A    +     +     L  +P+  
Sbjct: 17  RAQLYTQIRQFFAERGVMEVETPVVSQAGVTDVHLASVQALRHINGKLQTQYLQTSPEFA 76

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ASG    +QI   FRD++    +   EF  L+     ++   +++   ++L+   
Sbjct: 77  MKRLLASGSGPIYQICKVFRDDEHG-RKHNSEFTMLEWYRPGLDLKALMHETADLLQTCL 135

Query: 262 E 262
           +
Sbjct: 136 Q 136



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           F      +  +K ++     A ++++   G E+A+       ++V+   F      +   
Sbjct: 213 FPPEMASLAKVKVDEDGEEVAARFEVYIEGLELANAYDELLDADVLRSRFEADNAERAKQ 272

Query: 518 ---VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              V      L  A    MP   GIA G+DR++M+ +    + +V  FP
Sbjct: 273 GLHVMPLDEHLLAALPH-MPECSGIALGVDRLLMVAMDQVKIEKVVAFP 320


>gi|224542002|ref|ZP_03682541.1| hypothetical protein CATMIT_01175 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525059|gb|EEF94164.1| hypothetical protein CATMIT_01175 [Catenibacterium mitsuokai DSM
           15897]
          Length = 46

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%)

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
               A + G+P  GG+  GIDR+VMLL G + +REV LFP  +N
Sbjct: 4   DYVEALEYGLPSTGGM--GIDRLVMLLTGQETIREVILFPHMKN 45


>gi|146332369|gb|ABQ22690.1| asparaginyl-tRNA synthetase-like protein [Callithrix jacchus]
          Length = 211

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   +E +L  +   GI        +       + G  PHGG   G+
Sbjct: 128 LMPNVGEIVGGSMRIWDNEEILAGYKREGIDPTP----YYWYTDQRKYGTCPHGGYGLGL 183

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +R +  +L   ++R+V L+P     C  
Sbjct: 184 ERFLTWILNRYHIRDVCLYPRFVQRCKP 211


>gi|86359620|ref|YP_471512.1| lysyl-tRNA synthetase protein [Rhizobium etli CFN 42]
 gi|86283722|gb|ABC92785.1| lysyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 353

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 5/131 (3%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVP---SRVNQGSFYAL 194
              ++ R  I  ++R     E+FIE  T +L  S   E           +   Q + + L
Sbjct: 20  RPFLIGRNAIQAALRGFFAREDFIEVDTAVLQVSPGNEAHLHAFATQAITTDGQTAPFYL 79

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+   + L+A+G  R    A  +R+ +      P EF  L+   +    + ++    
Sbjct: 80  HTSPEFACKKLLAAGEQRISCFAHVYRNRERGPLHHP-EFTMLEWYRAGESYESLMMDCV 138

Query: 255 NVLRGVFEEFS 265
            +L    E   
Sbjct: 139 RILALAAETVK 149



 Score = 50.1 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 5/89 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMP 534
           A +++L   G E+A+G      +    + F      K                A    MP
Sbjct: 260 AERFELYACGVELANGFGELTNAGEQRRRFEIEMAEKARIYGETYPVDEDFLSALSL-MP 318

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              GIA G DR+VML  GA  + +V   P
Sbjct: 319 EASGIALGFDRLVMLATGASRIDQVLWAP 347


>gi|239994933|ref|ZP_04715457.1| lysyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 210

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 73/206 (35%), Gaps = 15/206 (7%)

Query: 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSP--EGARDFLVPSRV---NQGSFYALPQ 196
            V R  ++ ++R    A N +E  TP+L+  +   E    F          + +   L  
Sbjct: 13  RVARAELLRTIREFFYARNVLEVDTPLLSNGTVTDEHLDAFDTQFNFASSGKPTTLYLQT 72

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+   + L+ +     +Q+   FR E       P EF  L+      +   +++ ++ +
Sbjct: 73  SPEYAMKRLLCADSGSIYQVCKAFRHEGEGRWHNP-EFTMLEWYRLGFDHFALMDEVDAL 131

Query: 257 LRGVFEEFSNGNTVSNNFLRICYDDAIRRY-GTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
           L    +E  N  +      ++ Y  A + Y   D     N +++  + E  +        
Sbjct: 132 L----QETLNTASAD----KMTYQQAFQTYLNIDPLSADNDVLLKAMEEQNIDIHAPQNL 183

Query: 316 KILSVNPGYEVWAIPAKGGGGNRAFC 341
              S       +AI  K G     F 
Sbjct: 184 SYDSKLQLLFSYAIEPKIGNEKPCFI 209


>gi|16124973|ref|NP_419537.1| asparaginyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221233694|ref|YP_002516130.1| lysyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|13421947|gb|AAK22705.1| asparaginyl-tRNA synthetase, putative [Caulobacter crescentus CB15]
 gi|220962866|gb|ACL94222.1| lysyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 352

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 52/147 (35%), Gaps = 8/147 (5%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVP---SRVNQGSFYAL 194
              ++ R RI  + R     + F E     L  S   E           +   + S   L
Sbjct: 22  RPFLLARNRITKAFRAWFEVQGFEEVEAAALQVSPGNEAHLHAFATQALTIAGEASPLYL 81

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+   + L+A+G ++ F +   +R+ +      P EF  L+   +      +++   
Sbjct: 82  HTSPEFACKKLLAAGENKIFSLGKVWRNRERGPLHHP-EFTMLEWYRAAAPYQTLMDD-C 139

Query: 255 NVLRGVFEEFSNGNTVSNNFLRICYDD 281
            VL  +  E +     +  F  +  D 
Sbjct: 140 AVLLALAAETAGTQRFA--FRGMTCDP 164



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 5/98 (5%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF-SNVGISKEVVENRF---GGL 525
           +  D     A +++L   G E+A+            + F   +     +   R+      
Sbjct: 253 RPKDADPRVAERFELYACGVELANAFGELTDPAEQRRRFLIEMDEKARIYGERYPIDEDF 312

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A    MPP  G A G DR+V+L  GA+ + +V   P
Sbjct: 313 LAALAH-MPPASGSALGFDRLVLLATGARRIEDVVWTP 349


>gi|325293925|ref|YP_004279789.1| lysyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325061778|gb|ADY65469.1| lysyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 354

 Score = 62.0 bits (149), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 5/117 (4%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVP---SRVNQGSFYALPQAPQQ 200
           R  I +  R      +F+E  T  L  S   E           +     +   L  +P+ 
Sbjct: 27  RNAIQSEFRSYFARADFLEVDTATLQISPGNEAHLHAFATQGLTPAGDAAPLYLHTSPEF 86

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
             + L+A+G +R F  A  +R+ +      P EF  L+        + ++    N+L
Sbjct: 87  ACKKLLAAGEERIFCFAHVYRNRERGPLHHP-EFTMLEWYRVGETYETLMKDSANLL 142



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 3/97 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
           + +   +  A +++L   G E+A+       +    + F    + K+ V      L   F
Sbjct: 252 RKSPGDARVAERFELYACGVELANAFGELTDAAEQRRRFEMEMVEKQRVYGETYPLDEDF 311

Query: 530 QCG---MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 MPP  GIA G DR+VML  GA  +  V   P
Sbjct: 312 LAALAIMPPASGIALGFDRLVMLATGAPRIDLVMWAP 348


>gi|325922520|ref|ZP_08184281.1| lysyl-tRNA synthetase (class II) [Xanthomonas gardneri ATCC 19865]
 gi|325546985|gb|EGD18078.1| lysyl-tRNA synthetase (class II) [Xanthomonas gardneri ATCC 19865]
          Length = 320

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 6/124 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFLVPS---RVNQGSFYA-L 194
             +  R R+   +R        +E  TP+L+ +   E   D         V+ G+    L
Sbjct: 9   AALQLRARLNAVIRAFFAERGVLEVETPVLSEAGNTEPNIDSFSTRFSGHVDAGAPLRWL 68

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+   + L+A+G    +++   FR+ +      P EF  L+      +   +     
Sbjct: 69  RTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNP-EFSMLEWYRVGWDDRALAQETI 127

Query: 255 NVLR 258
            +++
Sbjct: 128 ALVQ 131



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 46/113 (40%), Gaps = 13/113 (11%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQ-------AFS 509
           + +   Q  +  ++ +      A +++L    +E+A+G    + ++             +
Sbjct: 209 HDWPASQCALARIRHDSPP--VAERFELYLGAYEVANGYHELNDAQEQRARFLRDNAVRA 266

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
             G+ +  ++ R   +        P   G+A G+DR++M L G   + +V  F
Sbjct: 267 ARGLQQLPLDERLLAVLSQL----PDCAGVAVGVDRLLMALRGTAQIADVLAF 315


>gi|170749146|ref|YP_001755406.1| lysine--tRNA ligase [Methylobacterium radiotolerans JCM 2831]
 gi|170655668|gb|ACB24723.1| Lysine--tRNA ligase [Methylobacterium radiotolerans JCM 2831]
          Length = 351

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 54/138 (39%), Gaps = 10/138 (7%)

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRV 186
           R  D RR  L    + R R++ + R      +F+E     L  S    A    F   +  
Sbjct: 13  RHAD-RRPAL----LLRNRVLAAFRGWFADRDFVEAEAACLQVSPGNEAHLSAFATEAIG 67

Query: 187 NQGS--FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
             G+     L  +P+   + L+A+G  R F +A  FR+ +      P EF  L+   +  
Sbjct: 68  ASGARTPLYLHTSPEFACKKLLAAGETRLFSVARVFRNRERGPLHHP-EFTMLEWYRAGA 126

Query: 245 EQDDILNTMENVLRGVFE 262
               ++    ++L G  E
Sbjct: 127 PYTALMADCADLLAGAAE 144



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 7/96 (7%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE-NRF---GGLYR 527
           +D     A +++L   G E+A+            + F      K+ V   R+        
Sbjct: 253 HDPR--VAERFELYACGVELANAFGELTDPAEQRRRFEAEMAEKQRVYGERYPIDDEFLA 310

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A    MP   GIA G DR+ ML  GA  V +V   P
Sbjct: 311 ALAV-MPEASGIALGFDRLAMLACGASRVEDVIWTP 345


>gi|239995587|ref|ZP_04716111.1| lysyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 96

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRAFQCGMP 534
           A ++++   G E+A+G      ++     F      +E      +        A   G+P
Sbjct: 4   AERFEVYYQGAELANGFHELSAAKEQRLRFETDNRKREEHGLPTKPIDENFLSALDAGLP 63

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           P  G+A GIDR++ML   AK+++EV  F
Sbjct: 64  PCAGVALGIDRLLMLKTNAKHIQEVINF 91


>gi|241206811|ref|YP_002977907.1| Lysine--tRNA ligase [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240860701|gb|ACS58368.1| Lysine--tRNA ligase [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 353

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 9/133 (6%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP------EGARDFLVPSRVNQGSFY 192
              ++ R  I  ++R     E+FIE  T +L  S          A + L      Q + +
Sbjct: 20  RPFLIGRNAIQAALRGFFAREDFIEVDTAVLQVSPGNEAHLHAFATEALTTD--GQKAPF 77

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+   + L+ +G +R    A  +R+ +      P EF  L+   +    + ++  
Sbjct: 78  YLHTSPEFACKKLLTAGEERISCFAHVYRNRERGPLHHP-EFTMLEWYRAGESYESLMMD 136

Query: 253 MENVLRGVFEEFS 265
              +L    E   
Sbjct: 137 CVRILALAAETVK 149



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 5/89 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
           A +++L   G E+A+G      +    + F      K  V             A    MP
Sbjct: 260 AERFELYACGVELANGFGELTNAAEQRRRFEIEMAEKARVYGETYPIDEDFLAALSL-MP 318

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              GIA G DR+VML  GA ++ +V   P
Sbjct: 319 EASGIALGFDRLVMLATGASHIDQVLWAP 347


>gi|289663145|ref|ZP_06484726.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 320

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 44/106 (41%), Gaps = 6/106 (5%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFL---VPSRVNQGSFYA-L 194
             +  R ++  ++R      N +E  TP+L+ +   E   +         V+ G+    L
Sbjct: 9   AALQLRAQLNAAIRAFFAERNVLEVETPVLSEAGNTEPNIESFSTRFTGHVDAGAPLRWL 68

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
             +P+   + L+A+G    +++   FR+ +      P EF  L+  
Sbjct: 69  RTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNP-EFSMLEWY 113



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 13/113 (11%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG---- 512
           + +   Q  +  ++ +D     A +++L    FE+A+G    + +      F        
Sbjct: 209 HDWPASQCALARVRNDDPP--VAERFELYLGSFEVANGYHELNDALEQRARFVRDNAVRA 266

Query: 513 ---ISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              + +  ++ R   +        P   G+A G+DR++M L G   + +V  F
Sbjct: 267 ARGLPQLPLDERLLAVLSQL----PDCAGVAVGVDRLLMALRGTAQIADVLAF 315


>gi|163785669|ref|ZP_02180205.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879065|gb|EDP73033.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 76

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 36/64 (56%)

Query: 4  YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
           R     DL  +++G  VRL GW   VR HGG+IF+++RD  G  QVV +P  +  E+ +
Sbjct: 9  KRDFYTTDLTENNIGDEVRLLGWAESVRDHGGVIFINLRDREGTIQVVFDPSKSPQEVVE 68

Query: 64 SVRS 67
            + 
Sbjct: 69 KAKK 72


>gi|330318792|gb|AEC11056.1| aspartyl tRNA synthetase [Camellia sinensis]
          Length = 184

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 2/86 (2%)

Query: 218 PCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNN-FLR 276
            CFRDED R++R P EF QLDME +F   +++L   E+++R V +   + +  +   F  
Sbjct: 57  RCFRDEDLRANRQP-EFTQLDMETAFTPLENMLRLNEDLIRQVIKFSGDQSYSATQSFPE 115

Query: 277 ICYDDAIRRYGTDKPDLRNPIIMHNV 302
                 + +YG D+PD+R  + + +V
Sbjct: 116 AYICCVMSQYGLDRPDVRLDLQLRDV 141


>gi|198465135|ref|XP_002134919.1| GA23746 [Drosophila pseudoobscura pseudoobscura]
 gi|198150029|gb|EDY73546.1| GA23746 [Drosophila pseudoobscura pseudoobscura]
          Length = 158

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 11/114 (9%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
           +   A   F M +   +      +         L+ N  EI  G +R   SE +L  +  
Sbjct: 49  RFPVAIKSFYMSRCPEDKRLTESVDV-------LLPNVGEIVGGSMRIWDSEELLNGYKR 101

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
            GI        +         G  PHGG   G++R +  LL   ++REV L+P 
Sbjct: 102 EGIDPTP----YYWYTDQRIYGTIPHGGYGLGLERFLCWLLNRYHIREVCLYPR 151


>gi|117924256|ref|YP_864873.1| tRNA synthetase, class II (D, K and N) [Magnetococcus sp. MC-1]
 gi|117608012|gb|ABK43467.1| tRNA synthetase, class II (D, K and N) [Magnetococcus sp. MC-1]
          Length = 317

 Score = 61.6 bits (148), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 12/111 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNG-------FEIASGGIRNHMSEVMLQAFSNV 511
           F   +  M  +         A ++++  NG        E+  G  + H  E +       
Sbjct: 207 FPAERAAMAQIDPGPPP--VAQRFEVYVNGVELANGYLELTDGAEQRHRLEQVNAQRLVQ 264

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G+S   V+ RF     A Q G+P   G+A G+DR++ML  GA ++ EV  F
Sbjct: 265 GLSPIAVDQRF---LAALQAGLPAVSGVALGVDRLLMLQCGATSLDEVMPF 312



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 6/123 (4%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILT-ASSPEGARDFLVPSRVNQGS-FYALPQAP 198
            + +R R++  +R        +E   P L  A +PE     + P R   G     L  +P
Sbjct: 15  RLRQRARLLAQLRAHFARTAALEVDPPALQRAIAPE---HHIEPIRCYDGQQLCYLHTSP 71

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + L+A+G    + +   +R E+   +    EF  L+          + +    ++ 
Sbjct: 72  ESCMKRLLAAGSGDIYFLGKVYRSEEQG-EHHNHEFTLLEWYRVGWSLAQLQDETAGLIG 130

Query: 259 GVF 261
            + 
Sbjct: 131 DLL 133


>gi|190893894|ref|YP_001980436.1| lysyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|190699173|gb|ACE93258.1| lysyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 353

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 9/136 (6%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP------EGARDFLVPSRVNQGSFY 192
              ++ R  I  ++R     E+FIE  T +L  S          A + L      Q + +
Sbjct: 20  RPFLIGRNAIQAALRGFFAREDFIEVDTAVLQVSPGNEAHLHAFATEALTTD--GQKAPF 77

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+   + L+A+G  R    A  +R+ +      P EF  L+   +      ++  
Sbjct: 78  YLHTSPEFACKKLLAAGEQRISCFAHVYRNRERGPLHHP-EFTMLEWYRAGESYYSLMMD 136

Query: 253 MENVLRGVFEEFSNGN 268
              +L    E      
Sbjct: 137 CVRILALAAETVKTDK 152



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 60/159 (37%), Gaps = 18/159 (11%)

Query: 417 RNHIAQEL---GII--NCNCFEFCW---IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMES 468
           R H+A EL   GI   + + +   +   ++D    E +    +I    + + + +  +  
Sbjct: 195 REHLAAELRSVGIRVADDDGWADLFSRVLVDK--IEPHLGFGRITIL-DEYPVSEAALAR 251

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GG 524
               D     A +++L   G E+A+G      +    + F      K  V          
Sbjct: 252 PSARDPR--VAERFELYACGVELANGFGELTNAAEQKRRFEIEMAEKMRVYGETYPIDED 309

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              A    MP   GIA G DR+VML  GA  + +V   P
Sbjct: 310 FLAALS-SMPEASGIALGFDRLVMLATGASRIDQVLWAP 347


>gi|327191735|gb|EGE58737.1| lysyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 353

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 9/136 (6%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP------EGARDFLVPSRVNQGSFY 192
              ++ R  I  ++R     E+FIE  T +L  S          A + L      Q + +
Sbjct: 20  RPFLIGRNAIQAALRGFFAREDFIEVDTAVLQVSPGNEAHLHAFATEALTTD--GQKAPF 77

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+   + L+A+G  R    A  +R+ +      P EF  L+   +      ++  
Sbjct: 78  YLHTSPEFACKKLLAAGEQRISCFAHVYRNRERGPLHHP-EFTMLEWYRAGESYYSLMMD 136

Query: 253 MENVLRGVFEEFSNGN 268
              +L    E      
Sbjct: 137 CVRILALAAETVKTDK 152



 Score = 50.5 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 5/89 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
           A +++L   G E+A+G      +    + F      K  V             A    MP
Sbjct: 260 AERFELYACGVELANGFGELTNAAEQRRRFEIEMAEKMRVYGETYPIDDDFLAALS-SMP 318

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              GIA G DR+VML  GA  + +V   P
Sbjct: 319 EASGIALGFDRLVMLATGASRIDQVLWAP 347


>gi|148654004|ref|YP_001281097.1| tRNA synthetase, class II (D, K and N) [Psychrobacter sp. PRwf-1]
 gi|148573088|gb|ABQ95147.1| tRNA synthetase, class II (D, K and N) [Psychrobacter sp. PRwf-1]
          Length = 330

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 10/127 (7%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSR------VNQGSFYAL 194
              KR +++ ++R        +E  TP+++ +   G  D  VPS        ++   Y L
Sbjct: 21  MAFKRAQLMATLRHFFAERQVLEVQTPLMSQA---GNTDVFVPSISTNITVADKPKTYYL 77

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+   + ++A+     +QI   FRD +    R   EF  L+        + +   + 
Sbjct: 78  HTSPEFAMKRMLATWKVAMYQICSVFRDNEVG-RRHNSEFTMLEWYRPGFNLEALAAELS 136

Query: 255 NVLRGVF 261
           ++L  V+
Sbjct: 137 DLLAVVY 143



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 11/106 (10%)

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG-------ISKE 516
             +  L+ ++  +  A +++L   G EIA+          +   F           +   
Sbjct: 224 AALAKLEIDEQGNEVAKRFELYIKGIEIANAYDELADGAALQARFEADNAERIRRGLPVM 283

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            ++ R            P   GIA G+DR++M++ GA ++ EV  F
Sbjct: 284 PIDERLVAACDEL----PACSGIALGVDRLLMVVTGAASIDEVIGF 325


>gi|262278110|ref|ZP_06055895.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258461|gb|EEY77194.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 333

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 47/121 (38%), Gaps = 4/121 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAPQQY 201
           R ++   +R        +E  TPI++ +       A    +     +     L  +P+  
Sbjct: 26  RAKLYTQIRQFFTERGVMEVETPIVSQAGVTDVHLASVQALRHINGKLQTQYLQTSPEFA 85

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ASG    +QI   FRD++    +   EF  L+      +   +++    +L+   
Sbjct: 86  MKRLLASGSGPIYQICKVFRDDEHG-RKHNSEFTMLEWYRPSFDLKALMHETAELLQTCL 144

Query: 262 E 262
           +
Sbjct: 145 Q 145



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           F      +  +K +      A ++++   G E+A+       +EV+   F      +   
Sbjct: 222 FPPEMASLAKVKLDGDGEEVAARFEVYIEGLELANAYDELLDAEVLRSRFEADNAERAKQ 281

Query: 518 ---VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              V      L  A    MP   GIA G+DR++M+ +    + +V  FP
Sbjct: 282 GLHVMPLDEHLLVALPH-MPECSGIALGVDRLLMVAMDQVKIEKVITFP 329


>gi|119384391|ref|YP_915447.1| lysine--tRNA ligase [Paracoccus denitrificans PD1222]
 gi|119374158|gb|ABL69751.1| Lysine--tRNA ligase [Paracoccus denitrificans PD1222]
          Length = 348

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 5/133 (3%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPSRVNQG--- 189
           R       ++ R RI  ++R  +  + FIE     L  S   E         R+      
Sbjct: 14  RHAGRRPLLLARNRIQAAIRDWLGTQGFIEADPLALAVSPGNEAHLHAFATHRIGNDGLA 73

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  +P+   + L+A+G +R F  +  +R+ +  +   P EF  L+   +  +   +
Sbjct: 74  QPMYLHTSPEFAMKKLLAAGEERIFAFSHVWRNRERGALHSP-EFTMLEWYRAGEDYRVL 132

Query: 250 LNTMENVLRGVFE 262
            +     LR   E
Sbjct: 133 FDDCAQYLRHAAE 145



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 7/97 (7%)

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR----FGGLY 526
           G+D     A +++L   G E+A+G           + F      K  +            
Sbjct: 252 GDDPRE--AERFELYACGVELANGFGELTDPVEQRRRFELEMEEKARIYGECYPLDEDFL 309

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            A    MP   G A G DR+VML  GA  + EV   P
Sbjct: 310 AALAF-MPAASGCALGFDRLVMLATGAPRIDEVIWTP 345


>gi|307297608|ref|ZP_07577414.1| tRNA synthetase class II (D K and N) [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916868|gb|EFN47250.1| tRNA synthetase class II (D K and N) [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 312

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 75/199 (37%), Gaps = 24/199 (12%)

Query: 125 RFKYRFL-DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLV 182
           R   R L  L    +   +  ++ I+      +  +NF+E   P + +   +    +   
Sbjct: 6   RLSSRVLEHLSDPVVKSAVKVKSAILGEASSFLRGKNFVEL-LPTIVSPITDPLNHEVHT 64

Query: 183 PSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR---SDRLPGEFYQLDM 239
                    Y L Q+   +KQ L    F+R F ++P  R E      S R   EF Q+D+
Sbjct: 65  TRFTYYDQEYRLTQSMIFHKQ-LACKSFERIFIVSPNVRLETSEKALSGRHLFEFSQIDL 123

Query: 240 EMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL------------RICYDDAIRRYG 287
           E+   +++ I++ +E+++  V        +   +FL             + + DA  +YG
Sbjct: 124 EIRNAKREQIMSLIEDLIITVMLSVKRNCSEEMDFLSSDPSIPSKPFATVKFMDAYEQYG 183

Query: 288 TDK-----PDLRNPIIMHN 301
            D           P  + +
Sbjct: 184 KDFETILSASFSEPFWLID 202



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 49/168 (29%), Gaps = 32/168 (19%)

Query: 402 IAGDPLKFCSFAADARNHIAQELGIINCNCF-EFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
           I   P     F      +  ++   I    F E  W++DFP +E                
Sbjct: 165 IPSKPFATVKFMDAYEQY-GKDFETILSASFSEPFWLIDFPIWER--------------- 208

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCN---GFEIASGGIRNHMSEVMLQAFSNVGISKEV 517
                   L   D  ++K    DL+     G  ++ G        ++ +        K  
Sbjct: 209 ----EFYDLLSEDKRTLKDM--DLILPHGFGETLSGGEREWEHQRILERMG-----FKGN 257

Query: 518 VENRFGGLYRAFQCG-MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                       + G + P  G   G++R+   +    NV    LFP 
Sbjct: 258 DPEELSWYMDIAEGGELVPTAGCGIGVERLTRYVCSLDNVSRTRLFPK 305


>gi|297808575|ref|XP_002872171.1| hypothetical protein ARALYDRAFT_910616 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318008|gb|EFH48430.1| hypothetical protein ARALYDRAFT_910616 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 67

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           +V+++    +G+  +  E          + G   H G   G++R+++   G  N+R+V  
Sbjct: 2   DVLMERMEEMGLPIKQYE----WYIDLRRHGTVKHSGFGLGLERMLLFATGMDNIRDVIP 57

Query: 562 FPMSQNFCDL 571
           FP      DL
Sbjct: 58  FPRYPGRADL 67


>gi|197106131|ref|YP_002131508.1| asparaginyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|196479551|gb|ACG79079.1| asparaginyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 334

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 10/127 (7%)

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVP---S 184
           R  D RR      +  R  I  ++R     + F E  T  L  S   E           +
Sbjct: 11  RHAD-RRP----FLTGRGAITRAVRAWFEGQGFSEVETAGLQVSPGNEAHLHAFATQALT 65

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              +     L  +P+   + L+A+G  + F +   +R+ +      P EF  L+   +  
Sbjct: 66  TAGEARTLYLHTSPEFACKKLLAAGETQIFSLGKVWRNRERGPLHHP-EFTMLEWYRTGA 124

Query: 245 EQDDILN 251
             + +++
Sbjct: 125 TYEVLMD 131



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 7/105 (6%)

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF 522
           +  +   K  D     A +++L   G E+A+            + F      K+ V    
Sbjct: 231 EAALARPKAADPR--VAERFELYACGVELANCFGELTDPAEQRRRFEAEMAEKQRVYGET 288

Query: 523 ----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 L  A    MP   G A G DR+ ML  GA+++ +V   P
Sbjct: 289 YPIDEELLDALAI-MPAASGGALGFDRLAMLATGARHIEDVLWAP 332


>gi|160903095|ref|YP_001568676.1| asparagine synthetase A [Petrotoga mobilis SJ95]
 gi|160360739|gb|ABX32353.1| tRNA synthetase class II (D K and N) [Petrotoga mobilis SJ95]
          Length = 319

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 74/188 (39%), Gaps = 23/188 (12%)

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQGSFYAL 194
           +T    ++ ++ I+   R  +  + F+E   P++ ++  +    D         G+ Y +
Sbjct: 24  ETYSDALLVQSEILRLSREFLAEKGFVEI-LPVIVSTITDPLNHDVFEAQIDYYGNKYYV 82

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFR---DEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
            ++    KQ +     D+ F  +P  R    E   S R   +F QLD+E    ++++I++
Sbjct: 83  TKSMILQKQ-VSVLIHDKIFSFSPNLRLETAEKYSSGRHLIDFVQLDIEAKETKREEIMD 141

Query: 252 TMENVLRGVFEEFS------------NGNTVSNNFLRICYDDAIRRYGTDKPDL-----R 294
            ME+++  V +               N       F +I    A   YG D   +      
Sbjct: 142 LMEDLIIYVLKGILTKYSGIIEKYHPNLTVPKKPFQKISVKKAKELYGDDYEKILSERAE 201

Query: 295 NPIIMHNV 302
            P+ + ++
Sbjct: 202 GPVWLIDI 209



 Score = 40.1 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 53/158 (33%), Gaps = 33/158 (20%)

Query: 418 NHIAQEL------GIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKG 471
              A+EL       I++       W++D P                         + +  
Sbjct: 181 VKKAKELYGDDYEKILSERAEGPVWLIDIPLL----------------NREFYDKQDMDN 224

Query: 472 NDLLSIKAFQYDLVCN--GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
            D+L      +DL+      E  SGG R H  E +++     G   E  E+      +  
Sbjct: 225 PDVL----LDFDLIYPEGHGEGISGGEREHEYEQIVKRIKLKGNGLESYED----YLKLA 276

Query: 530 QCGMPPH-GGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           + G+  H  G   GI+R    +L   +V +  LF  + 
Sbjct: 277 KEGLLKHSAGCGIGIERFTKYILDLDHVEKSRLFAKAP 314


>gi|218682608|ref|ZP_03530209.1| Lysine--tRNA ligase [Rhizobium etli CIAT 894]
          Length = 353

 Score = 61.2 bits (147), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 50/133 (37%), Gaps = 9/133 (6%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP------EGARDFLVPSRVNQGSFY 192
              +V R  I  ++R     E+FIE  T  L  S          A + L      Q + +
Sbjct: 20  RPFLVGRNAIQAALRGFFAREDFIEVDTAALQISPGNEAHLHAFATEALTTD--GQRAPF 77

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+   + L+A+G +R    A  +R+ +      P EF  L+   +    + ++  
Sbjct: 78  YLHTSPEFACKKLLAAGEERISCFAHVYRNRERGPLHHP-EFTMLEWYRAGESYESLMMD 136

Query: 253 MENVLRGVFEEFS 265
              +L    E   
Sbjct: 137 CVRILALAAEMVK 149



 Score = 49.3 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 5/89 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMP 534
           A +++L   G E+A+G      +    + F      K                A    MP
Sbjct: 260 AERFELYACGVELANGFGELTNAGEQRRRFEIEMAEKARVYGETYPLDEDFLAALSL-MP 318

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              GIA G DR+VML  GA  + +V   P
Sbjct: 319 EASGIALGFDRLVMLATGASRIDQVLWAP 347


>gi|188582435|ref|YP_001925880.1| tRNA synthetase class II (D K and N) [Methylobacterium populi
           BJ001]
 gi|179345933|gb|ACB81345.1| tRNA synthetase class II (D K and N) [Methylobacterium populi
           BJ001]
          Length = 352

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 5/117 (4%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQG--SFYAL 194
              ++ R RI+ + R      +F+E     L  S    A    F   + +  G      L
Sbjct: 18  RPLLLTRNRILAAFRAWFSDADFVEVEAAALQVSPGNEAHLSAFATEAILPDGGREPLYL 77

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +P+   + L+A+G  R F +A  FR+ +  +   P EF  L+   +  + D ++ 
Sbjct: 78  HTSPEFACKKLLAAGEPRLFSLAHVFRNRERGALHHP-EFTMLEWYRAGTDYDALMQ 133



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 11/101 (10%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK-------EVVENRF 522
           + +      A +++L   G E+A+            + F      K         ++  F
Sbjct: 249 RPSPRDPRVAERFELYACGVELANAFGELTDPAEQRRRFEAEMAEKARVYGERYPIDEEF 308

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                A    MP   GIA G DR+VML  GA  + +V   P
Sbjct: 309 ---LEALAM-MPAASGIALGFDRLVMLATGAPRIDDVIWTP 345


>gi|221639910|ref|YP_002526172.1| Lysine--tRNA ligase [Rhodobacter sphaeroides KD131]
 gi|221160691|gb|ACM01671.1| Lysine--tRNA ligase [Rhodobacter sphaeroides KD131]
          Length = 328

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 5/95 (5%)

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
              +  A +++L   G E+A+G           + F      KE V      L      A
Sbjct: 233 PDDARVAERFELYACGVELANGFGELTDPAEQRRRFEAEMAEKERVYGETYPLDEEFLEA 292

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               MPP  GIA G DR+VML  GA  + EV   P
Sbjct: 293 LAF-MPPASGIAMGFDRLVMLATGAPRIDEVIWAP 326



 Score = 48.9 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 5/126 (3%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPS---RVNQGSFYALPQ 196
            ++ R RI +++R  ++A+ F E     L  S   E               QG    L  
Sbjct: 1   MLLARNRIQSAIRGWLMAQGFTEVDPAALQVSPGNEAHLHGFATEAIGNDGQGRRMYLHT 60

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +P+   + L+A+G  R    +  +R+ +      P EF  L+        + ++      
Sbjct: 61  SPEFAMKKLLAAGETRIAAFSHVWRNRERGVLHSP-EFTMLEWYRVGEGYEVLMADCAAF 119

Query: 257 LRGVFE 262
           LR   E
Sbjct: 120 LRLAAE 125


>gi|218513676|ref|ZP_03510516.1| lysyl-tRNA synthetase protein [Rhizobium etli 8C-3]
          Length = 184

 Score = 60.9 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 9/136 (6%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP------EGARDFLVPSRVNQGSFY 192
              ++ R  I  ++R     E+FIE  T +L  S          A + L      Q + +
Sbjct: 20  RPFLIGRNAIQAALRGFFAREDFIEVDTAVLQISPGNEAHLHAFATEALTTD--GQKAPF 77

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+   + L+A+G  R    A  +R+ +      P EF  L+   +      ++  
Sbjct: 78  YLHTSPEFACKKLLAAGEQRISCFAHVYRNRERGPLHHP-EFTMLEWYRAGESYYSLMMD 136

Query: 253 MENVLRGVFEEFSNGN 268
              +L    E      
Sbjct: 137 CVRILALAAETVKTDK 152


>gi|2664212|emb|CAA10905.1| asparaginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 276

 Score = 60.9 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 32/88 (36%), Gaps = 3/88 (3%)

Query: 190 SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F+       A  ++     AS   + +   P F  +   + R   E + ++ EM+F E 
Sbjct: 9   DFFGRDTYLTASGRFHLESYASALGKVYTFGPRFIADKIDNARHLAEKWNVETEMAFAEL 68

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNF 274
           DD ++  +   + + +           F
Sbjct: 69  DDAMDCADEYFKFLCKYVLENRDEDMKF 96



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 6/95 (6%)

Query: 472 NDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A  +DLV      + +G       E++       G ++     +F       +
Sbjct: 181 NDDKKTVA-AFDLVVPKVGVVITGSQNEERFEILDARIGESGFTR----EKFEWYLDLRR 235

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G   H GI+  ++++++   G  ++++   FP S
Sbjct: 236 HGTVKHSGISLSMEQMLLYATGLPDIKDAIPFPRS 270


>gi|330991008|ref|ZP_08314962.1| hypothetical protein SXCC_00917 [Gluconacetobacter sp. SXCC-1]
 gi|329761829|gb|EGG78319.1| hypothetical protein SXCC_00917 [Gluconacetobacter sp. SXCC-1]
          Length = 339

 Score = 60.9 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 55/151 (36%), Gaps = 9/151 (5%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEG-ARDFLVPSRVNQG---SFYALPQAPQ 199
           +R  ++  +R    A  ++E  TP    +  E          R           L  +P+
Sbjct: 23  RRNLVLRGIRAFFDARGYVEVETPCAVPTPGEEVHLKVFATERAGADGTRQKLWLHTSPE 82

Query: 200 QYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
              + ++A+     +Q+A  +R+ +        EF  L+          +++  E +LR 
Sbjct: 83  FAMKRIVAATGLPVYQLARVWRNAEGG-RLHAHEFTMLEWYRPGATLAGLMDETEALLRA 141

Query: 260 VFEEF----SNGNTVSNNFLRICYDDAIRRY 286
           V        ++   ++  F R+   DA  R+
Sbjct: 142 VLPPVVRVGNDTIGIAAPFERLRVADAFHRH 172



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 39/112 (34%), Gaps = 16/112 (14%)

Query: 460 TMPQGGMESLKGNDLLSIK-AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           T       +L  +D    + A +++L   G E+A+       S      F      + V 
Sbjct: 226 THWPASQAALARSDPADPRVALRFELYAGGIELANAFEELTDSAEQRARFMADRARRRVL 285

Query: 518 ----------VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
                     ++  F           PP  GIA G DR+VML  G   + +V
Sbjct: 286 YPDESGLDWPMDEAFLAALDRL----PPCAGIALGFDRLVMLAAGTSRIADV 333


>gi|302874473|ref|YP_003843106.1| tRNA synthetase class II (D K and N) [Clostridium cellulovorans
           743B]
 gi|307690920|ref|ZP_07633366.1| tRNA synthetase class II (D K and N) [Clostridium cellulovorans
           743B]
 gi|302577330|gb|ADL51342.1| tRNA synthetase class II (D K and N) [Clostridium cellulovorans
           743B]
          Length = 324

 Score = 60.9 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 55/137 (40%), Gaps = 3/137 (2%)

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           R  L   +  +  I+ ++   M     +     ++   +     D    S   Q   + +
Sbjct: 26  RQNLSTILKIQQGILRAVDDFMYKNGVVRMMPLMIAPVTDTLNHDVEETSITYQNQNFDV 85

Query: 195 PQAPQQYKQL-LMASGFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILN 251
            ++   +KQL LM  G ++ + ++P  R E  +    R   EF Q+D E      DDIL 
Sbjct: 86  MKSMIFHKQLTLMNEGLEKIYIVSPNIRLERAERGDSRHLFEFTQIDFEFKNANMDDILT 145

Query: 252 TMENVLRGVFEEFSNGN 268
            +E+++  +F E     
Sbjct: 146 FIESLVSYIFSEVKEKY 162



 Score = 40.1 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 4/110 (3%)

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQ-YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
           A  PF +     E     DL +   ++ YDL+     +          E + +       
Sbjct: 206 ATQPFFLTNHKREFYDAEDLNNRGNYRNYDLIWPRGYVEGLSGGE--REYLYERIIERMD 263

Query: 514 SKEVVENRFGGLYRAFQCGM-PPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                ++RF    +  + G+ P   G   G++R+   +     V  V++F
Sbjct: 264 ELNSDKHRFRSYLKLAKDGLIPKTAGAGLGVERMTRFVCQLPEVDAVTVF 313


>gi|58038707|ref|YP_190671.1| lysyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|58001121|gb|AAW60015.1| Lysyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 119

 Score = 60.9 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 38/106 (35%), Gaps = 5/106 (4%)

Query: 460 TMPQGGMESLKGNDLLSIKA-FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           T       +L   D    +A  +++L  +G E+A+            + F+     +  +
Sbjct: 11  THWPAEQAALARRDPEDGRAALRFELYVSGLELANAFEELTDPVEQRERFATDRKRRMEL 70

Query: 519 ENRFGGLYRAFQCGM----PPHGGIAAGIDRIVMLLLGAKNVREVS 560
                              PP  GIA G DR+VML  GA  + ++ 
Sbjct: 71  SPDQDWAVDEAFLAALPDLPPCSGIALGFDRLVMLATGAPRISDIL 116


>gi|146278437|ref|YP_001168596.1| lysine--tRNA ligase [Rhodobacter sphaeroides ATCC 17025]
 gi|145556678|gb|ABP71291.1| Lysine--tRNA ligase [Rhodobacter sphaeroides ATCC 17025]
          Length = 380

 Score = 60.9 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 61/174 (35%), Gaps = 12/174 (6%)

Query: 113 PVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTAS 172
           P    R    S    +R  D RR      ++ R RI +++R  + AE F E     L  S
Sbjct: 25  PDESRRMSASSWWQPHRHAD-RRP----LLLARNRIQSAIRDWLGAEGFTEVDPAALQVS 79

Query: 173 SP-EGARDFLVPS---RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSD 228
              E        S      QG    L  +P+   + L+A+G  R    A  +R+ +    
Sbjct: 80  PGNEAHLHGFETSAIGNDGQGRRMYLHTSPEFAMKKLLAAGETRIAAFAHVWRNRERGVL 139

Query: 229 RLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDA 282
             P EF  L+      + + ++      LR   E          +  RIC   A
Sbjct: 140 HSP-EFTMLEWYRVGEDYEVLMEDCAAFLRLAAEAAGGRELRFRD--RICDPFA 190



 Score = 60.5 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 5/102 (4%)

Query: 471 GNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
            +D     A +++L   G E+A+G           + F      KE V      L   F 
Sbjct: 280 TDDPR--VAERFELYACGVELANGFGELTDPAEQRRRFEAEMAEKERVYGETYPLDEEFL 337

Query: 531 CG---MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
                MPP  GIA G DR+VML  GA  + EV   P++ +  
Sbjct: 338 AALALMPPASGIALGFDRLVMLATGAPRIDEVIWAPVAASAR 379


>gi|77464047|ref|YP_353551.1| putative lysyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|77388465|gb|ABA79650.1| putative lysyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 345

 Score = 60.9 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 5/95 (5%)

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
              +  A +++L   G E+A+G           + F      KE V      L      A
Sbjct: 250 PDDARVAERFELYACGVELANGFGELTDPAEQRRRFEAEMAEKERVYGETYPLDEEFLEA 309

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               MPP  GIA G DR+VML  GA  + EV   P
Sbjct: 310 LAL-MPPASGIAMGFDRLVMLATGAPRIDEVIWAP 343



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 10/139 (7%)

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPS-- 184
           +R  D RR      ++ R RI +++R  + AE F+E     L  S   E           
Sbjct: 10  HRHAD-RRP----LLLARNRIQSALRGWLGAEGFVEVDPAALQVSPGNEAHLHGFATEAI 64

Query: 185 -RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               QG    L  +P+   + L+A+G  R    +  +R+ +      P EF  L+     
Sbjct: 65  GNDGQGRRMYLHTSPEFAMKKLLAAGETRIAAFSHVWRNRERGVLHSP-EFTMLEWYRVG 123

Query: 244 VEQDDILNTMENVLRGVFE 262
              + ++      LR   E
Sbjct: 124 EGYEVLMADCAAFLRLAAE 142


>gi|90424305|ref|YP_532675.1| lysine--tRNA ligase [Rhodopseudomonas palustris BisB18]
 gi|90106319|gb|ABD88356.1| Lysine--tRNA ligase [Rhodopseudomonas palustris BisB18]
          Length = 350

 Score = 60.9 bits (146), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 48/134 (35%), Gaps = 12/134 (8%)

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R LD         +  R  I  + R       FIE  T IL AS P        P     
Sbjct: 15  RHLD-----RAPFLRARAEITRATRQWFADRGFIEVETGILQAS-PGNETHLHAPRTELT 68

Query: 189 ---GSFY--ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
              G      L  +P+   + L+A+G  +  + A  FRD + R D    EF  L+   + 
Sbjct: 69  TGSGERLCRYLRTSPEFACKKLLAAGEQKIVEFARVFRDRE-RGDLHLPEFTMLEWYRAG 127

Query: 244 VEQDDILNTMENVL 257
                +++    V+
Sbjct: 128 APYQAVVDDCVAVI 141



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF-SNVGISKEV 517
           +  P+  +     +D     A ++++   G E+A+G      ++     F   +   +  
Sbjct: 240 YPAPEAALARTLPSDPR--VAERFEVYACGVELANGFGELTDAQEQRARFTKAMDEKQRR 297

Query: 518 VENRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              R+        A    MP   G+A G DR+VML  GA+ + EV   P
Sbjct: 298 YGERYPLDEEFLEAVGQ-MPEASGVALGFDRLVMLAAGARRIDEVVWTP 345


>gi|332558922|ref|ZP_08413244.1| lysine--tRNA ligase [Rhodobacter sphaeroides WS8N]
 gi|332276634|gb|EGJ21949.1| lysine--tRNA ligase [Rhodobacter sphaeroides WS8N]
          Length = 345

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 5/95 (5%)

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
              +  A +++L   G E+A+G           + F      KE V      L      A
Sbjct: 250 PDDARVAERFELYACGVELANGFGELTDPAEQRRRFEAEMAEKERVYGETYPLDEEFLEA 309

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               MPP  GIA G DR+VML  GA  + EV   P
Sbjct: 310 LAL-MPPASGIAMGFDRLVMLATGAPRIDEVIWAP 343



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 10/139 (7%)

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPS-- 184
           +R  D RR      ++ R RI +++R  + AE F+E     L  S   E           
Sbjct: 10  HRHAD-RRP----LLLARNRIQSAIRGWLGAEGFVEVDPAALQVSPGNEAHLHGFATEAI 64

Query: 185 -RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               QG    L  +P+   + L+A+G  R    +  +R+ +      P EF  L+     
Sbjct: 65  GNDGQGRRMYLHTSPEFAMKKLLAAGETRIAAFSHVWRNRERGVLHSP-EFTMLEWYRVG 123

Query: 244 VEQDDILNTMENVLRGVFE 262
              + ++      LR   E
Sbjct: 124 EGYEVLMADCAAFLRLAAE 142


>gi|126462891|ref|YP_001044005.1| lysine--tRNA ligase [Rhodobacter sphaeroides ATCC 17029]
 gi|126104555|gb|ABN77233.1| Lysine--tRNA ligase [Rhodobacter sphaeroides ATCC 17029]
          Length = 375

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 5/95 (5%)

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRA 528
              +  A +++L   G E+A+G           + F      KE V      L      A
Sbjct: 280 PDDARVAERFELYACGVELANGFGELTDPAEQRRRFEAEMAEKERVYGETYPLDEEFLEA 339

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
               MPP  GIA G DR+VML  GA  + EV   P
Sbjct: 340 LAL-MPPASGIAMGFDRLVMLATGAPRIDEVIWAP 373



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 10/139 (7%)

Query: 128 YRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPS-- 184
           +R  D RR      ++ R RI +++R  + AE F+E     L  S   E           
Sbjct: 40  HRHAD-RRP----LLLARNRIQSALRGWLGAEGFVEVDPAALQVSPGNEAHLHGFATEAI 94

Query: 185 -RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
               QG    L  +P+   + L+A+G  R    +  +R+ +      P EF  L+     
Sbjct: 95  GNDGQGRRMYLHTSPEFAMKKLLAAGETRIAAFSHVWRNRERGVLHSP-EFTMLEWYRVG 153

Query: 244 VEQDDILNTMENVLRGVFE 262
              + ++      LR   E
Sbjct: 154 EGYEVLMADCAAFLRLAAE 172


>gi|162146334|ref|YP_001600793.1| lysyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209543663|ref|YP_002275892.1| tRNA synthetase class II (D K and N) [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161784909|emb|CAP54452.1| putative lysyl-tRNA synthetase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209531340|gb|ACI51277.1| tRNA synthetase class II (D K and N) [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 340

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 148 IINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGSFYAL--PQAPQQYKQ 203
           +   +R    A  ++E  TP    +  E    R F      + G+  AL    +P+   +
Sbjct: 25  VGRGIRAFFDARGYLEVETPCAVPTPGEEVHLRVFRTEREHHDGTRQALFLHTSPEFAMK 84

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            ++A+     FQ+A  +R+ +  S     EF  L+          +++  E +LR V   
Sbjct: 85  RIVAATGLPVFQLARVWRNAE-GSHLHAPEFTMLEWYRPGATLSGLMDETEALLRAVLPP 143

Query: 264 FSNGN---------TVSNNFLRICYDDAIRRY 286
             +            +   F R+  + A  R+
Sbjct: 144 VVHRPGGLAAGAEIRIDAPFERLTMEQAFARH 175



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 41/124 (33%), Gaps = 12/124 (9%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E      +  F  + +   Q  +      D  +  A +++L   G E+A+          
Sbjct: 217 EPAIGRDRPTFLTH-WPASQAALARRDPADPRT--ALRFELYAGGIELANAFEELTDPVE 273

Query: 504 MLQAFSNVGIS--------KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKN 555
             + F                        L  A    +PP  GIA G DR+VML  GA  
Sbjct: 274 QRRRFMADRERRAALYGAAPATAWPMDEALLAALDH-LPPCAGIALGFDRLVMLAAGALR 332

Query: 556 VREV 559
           + ++
Sbjct: 333 IGDI 336


>gi|148244316|ref|YP_001219010.1| lysyl-tRNA synthetase, class II [Candidatus Vesicomyosocius
           okutanii HA]
 gi|146326143|dbj|BAF61286.1| lysyl-tRNA synthetase, class II [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 294

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 9/132 (6%)

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG----ARDFLVPSRVNQ 188
           + R+TL    +K+  II  +R     +  +E  TPIL  +S       +    + + +  
Sbjct: 3   MIRNTL----IKKQLIIQKIRQFFKEQEVLEVQTPILQNTSTSDVYIDSISLTINTDIGI 58

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
            S   L  +P+   + L+A G    +QI   FR+ +    +   EF  L+      +   
Sbjct: 59  QSIQYLHTSPELEMKKLLAQGSGDIYQICQVFRNNEYG-KQNFNEFTLLEYYRLGFDIHQ 117

Query: 249 ILNTMENVLRGV 260
           ++  M N+L+ +
Sbjct: 118 LMADMINLLKML 129



 Score = 42.7 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 10/133 (7%)

Query: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEE-EKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           IA +LG+       F WI D     +    E K+      F       +S     + +  
Sbjct: 163 IASKLGLSTD----FVWIEDLQMLLFVHLVEPKLKNLPLCFIYDYPKSQSTLAK-VKNQV 217

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG----GLYRAFQCGMP 534
           A +++L  NG E+A+G       +   Q F      ++                    +P
Sbjct: 218 AKRFELYLNGVEVANGYDELQTKDEYQQVFICENNKRKQFSKLISQIDVSFLSKLSKPLP 277

Query: 535 PHGGIAAGIDRIV 547
              G+A GI+R++
Sbjct: 278 QCTGVAIGINRLL 290


>gi|75675834|ref|YP_318255.1| tRNA synthetase, class II (D, K and N) [Nitrobacter winogradskyi
           Nb-255]
 gi|74420704|gb|ABA04903.1| tRNA synthetase, class II (D, K and N) [Nitrobacter winogradskyi
           Nb-255]
          Length = 347

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 50/144 (34%), Gaps = 10/144 (6%)

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA---RD 179
           S   + R  D R   L      R+ +  ++R    A+ F+E  T +L  S          
Sbjct: 6   SWWDQSRHAD-RMPFLKA----RSAVTRALRAWFDAQGFVEVETGVLQVSPGNETHLHAP 60

Query: 180 FLVPSRVNQGSF-YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238
               +          L  +P+   + L+A+G  +  + A  FRD + R      EF  L+
Sbjct: 61  RTTLTTAAGDHLTRYLRTSPEFACKKLLAAGEQKIVEFARVFRDRE-RGVLHLPEFTMLE 119

Query: 239 MEMSFVEQDDILNTMENVLRGVFE 262
              +    + ++     V+     
Sbjct: 120 WYRAGGSYEAVMADCITVIANAAR 143



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 5/107 (4%)

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM----LQAFSNVGISKE 516
            P       + +   S  A ++++   G E+A+G      +        QA  +  I   
Sbjct: 237 YPAPEAALARISPSDSRVAERFEIYACGVELANGFGELTDAAEQRIRFAQAMDDKQIRYG 296

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                      A    MP  GG+A G+DR+VML  GA  + +V   P
Sbjct: 297 ERYPLDEDFLAAVAR-MPEAGGVALGLDRLVMLASGASRIDQVVWTP 342


>gi|207111352|ref|ZP_03245514.1| aspartyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 42

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 28/41 (68%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHY 45
          R+H C ++   DVG  ++++GW +  R HGG++F+D+RD  
Sbjct: 2  RSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKS 42


>gi|254292406|ref|YP_003058429.1| lysine--tRNA ligase [Hirschia baltica ATCC 49814]
 gi|254040937|gb|ACT57732.1| Lysine--tRNA ligase [Hirschia baltica ATCC 49814]
          Length = 343

 Score = 60.5 bits (145), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 11/144 (7%)

Query: 120 YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    R  D RR      ++ R ++ +++R     E F+E     L  S       
Sbjct: 2   SDTPWWDAKRHAD-RRP----FLLARNKVRSALRNWFENEEFLEVECGALQISPGNETHL 56

Query: 180 FLVPSRVNQGS-----FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEF 234
               S+             L  +P+   + L+A+G  +    A  +R+ +      P EF
Sbjct: 57  HAFSSKFLDEDGSTNQELFLHTSPEFSCKKLLAAGETKIVDFARVYRNRESGPLHSP-EF 115

Query: 235 YQLDMEMSFVEQDDILNTMENVLR 258
             ++   +     D++    N+ R
Sbjct: 116 TMIEWYRTGASLKDVMKDTANLAR 139



 Score = 50.5 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 44/128 (34%), Gaps = 7/128 (5%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
                E++  ID     +  P       +        A ++++   G E+A+G       
Sbjct: 215 LVSKIEDKLGIDRLTFLYNYPICEAALARPCRDDPRFAERFEMYACGVELANGFGELTDP 274

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHG----GIAAGIDRIVMLLLGAKNVR 557
               + F    I K         L         PH     G+A G DR+VML   A+ + 
Sbjct: 275 IEQRKRFEADMILKLAYYGENYPLDEEL-LAALPHIPDASGVALGFDRLVMLCSNARRID 333

Query: 558 EV--SLFP 563
           +V  + FP
Sbjct: 334 DVLWTPFP 341


>gi|229367548|gb|ACQ58754.1| Probable asparaginyl-tRNA synthetase, mitochondrial precursor
           [Anoplopoma fimbria]
          Length = 144

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 19/125 (15%)

Query: 7   HSC----------GDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS 56
           H C            +  +++G+ V++ GW+  VRP    +FL + D   +  +     S
Sbjct: 24  HYCQKAPATLRVSEAVSGAELGANVKVQGWIRSVRPQKANLFLHVNDGSSLQSLQVVASS 83

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
                    +    L   G  +  +     +      +EL A +I I+     +  P   
Sbjct: 84  ---------KLNDPLLTFGSAVEVTGTLRKSPHQKQPVELEADQIHIVGECNPVDFPFKI 134

Query: 117 EREYP 121
           +    
Sbjct: 135 KDRTD 139


>gi|209551369|ref|YP_002283286.1| lysine--tRNA ligase [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209537125|gb|ACI57060.1| Lysine--tRNA ligase [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 353

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 9/118 (7%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP------EGARDFLVPSRVNQGSFY 192
              ++ R  I  ++R     E+F+E  T  L  S          A + L      Q + +
Sbjct: 20  RPFLIGRNAIQAALRGFFAREDFLEVDTATLQISPGNEAHLHAFATEALTTD--GQRAPF 77

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
            L  +P+   + L+A+G +R    A  +R+ +      P EF  L+   +    + ++
Sbjct: 78  YLHTSPEFACKKLLAAGEERISCFAHVYRNRERGPLHHP-EFTMLEWYRAGESYESLM 134



 Score = 50.5 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 5/89 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRF----GGLYRAFQCGMP 534
           A +++L   G EIA+G      +    + F      K  +             A    MP
Sbjct: 260 AERFELYACGVEIANGFGELTNAAEQRRRFEIEMAEKARIYGETYPLDEDFLAALSL-MP 318

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              GIA G DR+VML  GA  + +V   P
Sbjct: 319 EASGIALGFDRLVMLATGASRIDQVLWAP 347


>gi|207109515|ref|ZP_03243677.1| lysyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 157

 Score = 60.5 bits (145), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 7/106 (6%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + G V  +R  G   F+ + D   I Q   + +    E  KS++    L +  +V+   
Sbjct: 59  SIVGRVKLLRLMGKACFIKVEDESAILQAYVSQNELNDE-FKSLKKH--LEVGDIVL--- 112

Query: 82  AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
            +       TG++ + A +  ILS    +PLP          +R++
Sbjct: 113 VKGFPFATKTGELSVHALEFHILSKT-IVPLPEKFHGLSDIELRYR 157


>gi|156372381|ref|XP_001629016.1| predicted protein [Nematostella vectensis]
 gi|156216007|gb|EDO36953.1| predicted protein [Nematostella vectensis]
          Length = 87

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 5/83 (6%)

Query: 483 DLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAA 541
           DL+  G  EI  G +R    + +++ +   GI        +       + G  PHGG   
Sbjct: 2   DLLMPGVGEIIGGSMRMWKYDELIEGYKREGIDPAP----YFWYTDQRKYGSCPHGGYGL 57

Query: 542 GIDRIVMLLLGAKNVREVSLFPM 564
           G++R +  LL  +++R+V  +P 
Sbjct: 58  GLERFLTWLLNRQHIRDVCFYPR 80


>gi|89256864|ref|YP_514226.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115315245|ref|YP_763968.1| lysine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156503038|ref|YP_001429103.1| tRNA synthetases class II protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167009243|ref|ZP_02274174.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254368140|ref|ZP_04984160.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|290953247|ref|ZP_06557868.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313527|ref|ZP_06804120.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89144695|emb|CAJ80026.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115130144|gb|ABI83331.1| lysine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134253950|gb|EBA53044.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|156253641|gb|ABU62147.1| tRNA synthetases class II protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 307

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 77/219 (35%), Gaps = 25/219 (11%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--GSFYALPQAP 198
           NI KR   +  +R      + +E  TP+  A        F+    +N   G  Y L  +P
Sbjct: 5   NIKKRAEYLAKIRNFFKDLDVLEVDTPL--AYDYAVTDPFIDVFSINTVAGKKY-LQSSP 61

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL- 257
           +   + L+A+G    +QI   FRDE         EF  ++     ++   ++  M+ +  
Sbjct: 62  EYAMKRLLAAGSGSIYQICKAFRDEPCGKLHNH-EFTMIEWYRVGIDYYQLMQEMQKLFT 120

Query: 258 -------------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                        + VFE++ N N        +           +   LRNP  + +  +
Sbjct: 121 MLKANLEFIYLSYQEVFEKYYNINPHDICLAELQAIVKENV--GEIQGLRNP-TIADCLD 177

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
                 +++   +   N  Y ++         +R   D+
Sbjct: 178 ILFS--YKIEKNLNQQNTIYFIYDYTIHQSALSRKVRDK 214



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 5/87 (5%)

Query: 475 LSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----LYRAFQ 530
             + A ++++ CNG E+A+G       +   + F N  ++++  +         L    +
Sbjct: 216 SQLVAARFEVFCNGIELANGYYELIDKKEQSKRFENDLVTRKQQQKALLDIDTKLLECLE 275

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVR 557
             +P   G+A G DR++M L G  N++
Sbjct: 276 N-IPECSGVALGFDRLLMSLEGISNIK 301


>gi|285018503|ref|YP_003376214.1| lysyl-tRNA_synthetase_class-2 protein [Xanthomonas albilineans GPE
           PC73]
 gi|283473721|emb|CBA16224.1| probable lysyl-trna_synthetase_class-2 protein [Xanthomonas
           albilineans]
          Length = 329

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 46/115 (40%), Gaps = 6/115 (5%)

Query: 150 NSMRCRMIAENFIECSTPILTASS-PEGARDFLVPS---RVNQG-SFYALPQAPQQYKQL 204
             +R    A + +E  TPIL+A+   E   +         V+ G +   L  +P+   + 
Sbjct: 28  ACIRRFFAARDVLELETPILSAAGNTEPNIESFQTRFSGHVDAGPALRWLRTSPEYPLKR 87

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
           L+A+G    +++   FR+ +      P EF  L+          ++     ++R 
Sbjct: 88  LLAAGVGDCYELGRVFRNGEAGGRHNP-EFTMLEWYRVGWNHLRLVEETVALVRE 141



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 5/94 (5%)

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV----VENRFGGLYRA 528
           D     A +++L   G+E+A+G      +    + F      +      +      L +A
Sbjct: 232 DDAPPVAERFELYLGGYELANGYHELTDASEQRRRFLRDHAVRHARGMPLPPLDERLLQA 291

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              G+P   G+A G+DR++M + G   +  V  +
Sbjct: 292 LP-GLPDCAGVAVGVDRLLMAMCGTTQIGAVLAY 324


>gi|220921876|ref|YP_002497177.1| tRNA synthetase class II (D K and N) [Methylobacterium nodulans ORS
           2060]
 gi|219946482|gb|ACL56874.1| tRNA synthetase class II (D K and N) [Methylobacterium nodulans ORS
           2060]
          Length = 350

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 5/107 (4%)

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQA-FSNVGISKEVVE 519
            P       + +      A +++L C G E+A+       ++   +   + +   + +  
Sbjct: 239 YPIPEAALARPSPHDPRVAERFELYCCGVELANAFGELTDADEQRRRFMAEMDEKERIYG 298

Query: 520 NRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
            R+        A    MP   GIA G DR+VML  GA+ + EV   P
Sbjct: 299 ERYPLDEDFLAALAR-MPEASGIALGFDRLVMLATGARRIEEVIWTP 344



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 5/106 (4%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV----NQGSFYAL 194
              ++ R RI  ++R       F+E  T  L  S    A      +R      +G    L
Sbjct: 17  RPRLLARNRIKAALRSWFSDRGFVEVDTAALQVSPGNEAHLSAFATRAIGPDGRGMPLYL 76

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
             +P+   + L+A+G  R    AP +R+ +      P EF  L+  
Sbjct: 77  HTSPEFACKKLLAAGERRLVSFAPVYRNRERGPLHHP-EFTLLEWY 121


>gi|1169260|sp|P41908|SYNC_SACDO RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|2133232|pir||S43538 DED81D protein - yeast (Saccharomyces sp.) (fragment)
 gi|471339|emb|CAA52090.1| DED81D [Saccharomyces douglasii]
          Length = 87

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 4/88 (4%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R      ++  F   GI      + +       + G  PHGG   G 
Sbjct: 4   LMPNVGEITGGSMRIDDMNELMAGFKREGIDT----DAYYWFIDQRKYGTCPHGGYGIGT 59

Query: 544 DRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           +RI+  L     VR+ SL+P     C  
Sbjct: 60  ERILAWLCDRFTVRDCSLYPRFSGRCKP 87


>gi|299133808|ref|ZP_07027002.1| Lysine--tRNA ligase [Afipia sp. 1NLS2]
 gi|298591644|gb|EFI51845.1| Lysine--tRNA ligase [Afipia sp. 1NLS2]
          Length = 345

 Score = 60.1 bits (144), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 43/116 (37%), Gaps = 14/116 (12%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY--------AL 194
            +R  I  ++R    A++F+E  T IL  S               Q             L
Sbjct: 24  CQRATITRAVRDWFGAQDFLEVETGILQVSPGN-----ETHLHALQADLPGEEGQIAGYL 78

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
             +P+   + L+A+G D+  + A  FR  +  S     EF  L+   +    + I+
Sbjct: 79  RTSPEFACKKLLAAGEDKIVEFAKVFRGRE-DSPLHLTEFTMLEWYRANAPYETIM 133



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 7/111 (6%)

Query: 457 NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF-SNVGISK 515
           + +  P+  +  ++  D     A ++++   G E+A+G      +    + F S +   +
Sbjct: 237 HEYPSPEAALARVQAGDPR--VAERFEVYGCGVELANGFGELTDAAEQRRRFISAMDEKE 294

Query: 516 EVVENRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                R+        A    MPP  G+A G DR+VML  GA  + +V   P
Sbjct: 295 RRYHERYPLDEDFLAALAQ-MPPASGVALGFDRLVMLASGATRLDQVIWAP 344


>gi|224499820|ref|ZP_03668169.1| aspartyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 38

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 1  MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIF 38
          M + RT  CG+L  + +G  V L GWV + R  GG+IF
Sbjct: 1  MEK-RTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIF 37


>gi|255584642|ref|XP_002533044.1| lysyl-tRNA synthetase, putative [Ricinus communis]
 gi|223527163|gb|EEF29334.1| lysyl-tRNA synthetase, putative [Ricinus communis]
          Length = 58

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
                A + GMP   G+  GIDR+V+LL  + ++ +V  FPM
Sbjct: 13  DDFLTALEYGMPRTSGMRFGIDRLVVLLTNSASILDVIAFPM 54


>gi|300022959|ref|YP_003755570.1| lysine--tRNA ligase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524780|gb|ADJ23249.1| Lysine--tRNA ligase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 349

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 7/114 (6%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPE-----GARDFLVPSRVNQ 188
           R       +V R RI  ++R     + FIE     L  S          R  LV + + +
Sbjct: 12  RHSDRRPFLVARGRIKTALRDWFTTQGFIEVEPGCLQVSPGNETHLHAFRTELVGTDLTR 71

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
              Y L  +P+   + L+A+G  + F   P FR+ +        EF  L+   +
Sbjct: 72  RDLY-LHTSPEFAMKKLLAAGETKIFTFTPVFRNREHG-KLHASEFTMLEWYRA 123



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 14/125 (11%)

Query: 455 AHNPFTMPQ---GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
            H P  + +         +   L    A +++L   G E+A+G      +    + F   
Sbjct: 229 VHRPEILCEYPINEAALARPTALDPAVAERFELYVCGVELANGFGELTDAGEQRRRFETW 288

Query: 512 GISK-------EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
              K         ++  F     A    MPP  G A G DR+ ML  GA+ + +V   P+
Sbjct: 289 MADKSRIYGERYPIDEDFLSALAA----MPPASGCALGFDRLAMLASGAERIEQVIWTPL 344

Query: 565 SQNFC 569
             +  
Sbjct: 345 PDSGT 349


>gi|73427047|gb|AAZ76103.1| putative pyruvate oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium]
          Length = 130

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 54/133 (40%), Gaps = 5/133 (3%)

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
            V    +QG    L  +P+ + + L+A+G    FQ+   FR+E+        EF  L+  
Sbjct: 2   FVGPGHSQGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMG-RHHNPEFTMLEWY 60

Query: 241 MSFVEQDDILNTMENVLRGVFE-EFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIM 299
               +   ++N ++++L+ V + + +   +    F R      I     DK  LR     
Sbjct: 61  RPHYDMYRLMNEVDDLLQQVLDCQPAESLSYQQAFQR---HLEIDPLSADKTQLREAAAK 117

Query: 300 HNVTEHFVHSEFR 312
            +++      E R
Sbjct: 118 LDLSNIADTEEDR 130


>gi|327399624|ref|YP_004340493.1| Lysine--tRNA ligase [Hippea maritima DSM 10411]
 gi|327182253|gb|AEA34434.1| Lysine--tRNA ligase [Hippea maritima DSM 10411]
          Length = 339

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 10/102 (9%)

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGIS 514
             +P  +     E    + +    A +++L   G E+A+     + S  + + F    IS
Sbjct: 247 VKHPTVIYNFPKERAALSKVEGGYAKRFELYIAGIELANCYDEENNSNEIRKRFKKNDIS 306

Query: 515 KEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                        A + G+PP  GIA GIDR++M+LL    +
Sbjct: 307 ----------FIEALEFGIPPSSGIAVGIDRLIMILLNRDRI 338



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 53/127 (41%), Gaps = 10/127 (7%)

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA-- 193
           +       ++  I+ ++R   +   F E  TP L  S        +  + +N     A  
Sbjct: 56  EENFAYYTQKFSILKTIREFFLNRGFTEVLTPKLKESI-------IHETNINYIKTSAGF 108

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
           L  +P+   + L++ GFD+ F+++  +R++         EF  L+    F +   ++  +
Sbjct: 109 LTSSPEVEIKKLLSLGFDKLFELSFAYRNDHKD-KLHKKEFLILEWYELFSKPTQVIERL 167

Query: 254 ENVLRGV 260
             +++ +
Sbjct: 168 IELIKHL 174


>gi|121535971|ref|ZP_01667765.1| hypothetical protein TcarDRAFT_0047 [Thermosinus carboxydivorans
           Nor1]
 gi|121305463|gb|EAX46411.1| hypothetical protein TcarDRAFT_0047 [Thermosinus carboxydivorans
           Nor1]
          Length = 43

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 22/38 (57%)

Query: 560 SLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKK 597
             FP +Q+  D++  +PS V+  QL+EL ++     KK
Sbjct: 1   MPFPKTQSATDMMTQAPSEVTPRQLKELHIKTDVVVKK 38


>gi|254784869|ref|YP_003072297.1| lysyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|237686219|gb|ACR13483.1| putative lysyl-tRNA synthetase [Teredinibacter turnerae T7901]
          Length = 322

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 10/111 (9%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML-------QAFSNV 511
           F   Q  +  +  ++     A ++++   G E+A+G      ++          +A    
Sbjct: 208 FPACQCALARVVPDETGVPVARRFEVYWGGIELANGYWELVDAQEQRARFMQDNKARVAQ 267

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           G  +  ++N F     A   G+P   G+A G+DR++M   G  ++ EV  F
Sbjct: 268 GKPEMALDNDF---LAALDAGLPECAGVALGVDRLLMCASGCAHIGEVMSF 315



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 75/228 (32%), Gaps = 47/228 (20%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY----------- 192
           +R ++I  +R    A + +E   P++  +           + +N  S             
Sbjct: 14  RRAQMIQQVRAFFAARSVLEVDVPVIGRA---------TVTDLNLDSLCVTRAVGSAGST 64

Query: 193 ---ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDI 249
               L  +P+ + + L+A+G    + +   FR ++      P EF  L+     ++   +
Sbjct: 65  LSGYLQTSPEFFMKRLLAAGSGDIYYLGKAFRADESGRIHNP-EFTMLEWYRCGMDDRAL 123

Query: 250 LNTMENVLRGV--------------FEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            + + ++ R +              FE+ +  N  + +   +  D A    G D  D   
Sbjct: 124 SDEVVSLCRAIQPGVAVVVTEYGAVFEQHTGLNPHTCSTETL-ADYARAHLGVDWFDEPR 182

Query: 296 PIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
            + +  +  H V        +    +    +   PA      R   D 
Sbjct: 183 GLWLDLLFTHCV--------EPQLGDGLVVIRDFPACQCALARVVPDE 222


>gi|118497166|ref|YP_898216.1| tRNA synthetase class II (D, K and N) [Francisella tularensis
           subsp. novicida U112]
 gi|194323464|ref|ZP_03057241.1| tRNA synthetases class II (D, K and N) family protein [Francisella
           tularensis subsp. novicida FTE]
 gi|118423072|gb|ABK89462.1| tRNA synthetase class II (D, K and N) [Francisella novicida U112]
 gi|194322319|gb|EDX19800.1| tRNA synthetases class II (D, K and N) family protein [Francisella
           tularensis subsp. novicida FTE]
          Length = 307

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 76/218 (34%), Gaps = 23/218 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           NI+KR   +  +R      + +E  TP+  A        F+    +N  +     Q+  +
Sbjct: 5   NIIKRAEYLAKIRNFFKDLDVLEVDTPL--AYDYAVTDPFIDVFSINTVAGKRYLQSSPE 62

Query: 201 Y-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL-- 257
           Y  + L+A+G    +QI   FRDE         EF  ++     ++   ++  M+ +   
Sbjct: 63  YAMKRLLAAGSGSIYQICKAFRDEPCGKLHNH-EFTMIEWYRVGIDYYQLMQEMQKLFTM 121

Query: 258 ------------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
                       + VFE++ N N        +           +   LRNP  + +  + 
Sbjct: 122 LKANLEFIYLSYQEVFEKYYNINPHDICLAELQAIVKENV--GEIQGLRNP-TIADCLDI 178

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
                +++   +   N  Y ++          R   D+
Sbjct: 179 LFS--YKIEKNLNQQNTIYFIYDYTIHQSALARKVRDK 214



 Score = 53.9 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 5/103 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +T+ Q  +     +    + A ++++ CNG E+A+G       +   + F N   +++  
Sbjct: 200 YTIHQSALARKVRDKNSQLVAARFEVFCNGIELANGYYELIDKKEQSKRFENDLATRKQQ 259

Query: 519 ENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           +         L    +  +P   G+A G DR++M L G  N++
Sbjct: 260 QKALLDIDTKLLECLEN-IPECSGVALGFDRLLMSLEGISNIK 301


>gi|240139758|ref|YP_002964235.1| putative lysyl-tRNA synthetase (poxA-like) [Methylobacterium
           extorquens AM1]
 gi|240009732|gb|ACS40958.1| putative lysyl-tRNA synthetase (poxA-like) [Methylobacterium
           extorquens AM1]
          Length = 352

 Score = 59.3 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 5/117 (4%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS--FYAL 194
              ++ R RI+   R      +F+E     L  S    A    F   + +  G+     L
Sbjct: 18  RPLLLTRNRILAGFRAWFAERDFVEVEAAALQVSPGNEAHLSAFATEAILPDGAREPLYL 77

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +P+   + L+A+G  R F +A  FR+ +  +   P EF  L+   +    D ++ 
Sbjct: 78  HTSPEFACKKLLAAGEPRLFSLAHVFRNRERGALHHP-EFTMLEWYRAGESYDALMQ 133



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 13/108 (12%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK-------EVVENRF 522
           + +      A + +L   G E+A+            + F      K         ++  F
Sbjct: 249 RPSPRDPRVAERCELYACGVELANAFGELTDPAEQRRRFEAEMAEKARIYGERYPIDEEF 308

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS--LFPMSQNF 568
                A    MP   GIA G DR+VML  GA  + +V     P +++ 
Sbjct: 309 ---LDALAV-MPEASGIALGFDRLVMLATGAPRIDDVIWTPVPRNRSR 352


>gi|262046466|ref|ZP_06019428.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|260573337|gb|EEX29895.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 88

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVML 549
           EI  G  R    E++ Q   + G++ E  +          + G  PH G   G +R +  
Sbjct: 11  EIFGGSEREGNYEILKQQILDAGLNLEDYQ----WYLDLRKFGGVPHSGFGMGFERTIAW 66

Query: 550 LLGAKNVREVSLFPM 564
           +    ++RE   FP 
Sbjct: 67  VCHLDHIREAIPFPR 81


>gi|218531179|ref|YP_002421995.1| tRNA synthetase class II (D K and N) [Methylobacterium
           chloromethanicum CM4]
 gi|218523482|gb|ACK84067.1| tRNA synthetase class II (D K and N) [Methylobacterium
           chloromethanicum CM4]
          Length = 352

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 5/117 (4%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQGS--FYAL 194
              ++ R RI+   R      +F+E     L  S    A    F   + +  G+     L
Sbjct: 18  RPLLLTRNRILAGFRAWFAERDFVEVEAAALQVSPGNEAHLSAFATEAILPDGAREPLYL 77

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +P+   + L+A+G  R F +A  FR+ +  +   P EF  L+   +    D ++ 
Sbjct: 78  HTSPEFACKKLLAAGEPRLFSLAHVFRNRERGALHHP-EFTMLEWYRAGESYDALMQ 133



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 13/108 (12%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK-------EVVENRF 522
           + +      A +++L   G E+A+            + F      K         ++  F
Sbjct: 249 RPSPRDPRVAERFELYACGVELANAFGELTDPAEQRRRFEAEMAEKARVYGERYPIDEEF 308

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS--LFPMSQNF 568
                A    MP   GIA G DR+VML  GA  + +V     P +++ 
Sbjct: 309 ---LDALAI-MPEASGIALGFDRLVMLATGAPRIDDVIWTPVPRNRSR 352


>gi|260574292|ref|ZP_05842297.1| Lysine--tRNA ligase [Rhodobacter sp. SW2]
 gi|259023758|gb|EEW27049.1| Lysine--tRNA ligase [Rhodobacter sp. SW2]
          Length = 349

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%)

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF-SNVGISKEVVENR 521
           +  +     +D     A +++L   G E+A+G           + F   +   + V  +R
Sbjct: 244 EAALARPTADDPRE--AERFELYACGVELANGFGELTNPAEQRRRFGLEMDEKQRVYGHR 301

Query: 522 F---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           +        A    MPP  GIA G DR+VML   A  + +V   P++Q
Sbjct: 302 YPLDEDFLAALAH-MPPASGIAMGFDRLVMLATAAPRIDDVIWVPVAQ 348



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 10/134 (7%)

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGAR--DFLVPSRV 186
           R  D RR      ++ R RI  ++R  +  E F E     L  S    A    F   +  
Sbjct: 13  RHAD-RRP----VLLARNRIQAALRGWLAGEGFTEVDPVALQISPGNEAHLHGFATTAIG 67

Query: 187 NQGSF--YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           N G+     L  +P+   + L+A+G  R    A  +R+ +  +   P EF  L+   +  
Sbjct: 68  NDGAPRPMYLHTSPEFAMKKLLAAGETRIAAFAHVWRNRERGALHSP-EFTMLEWYRAGE 126

Query: 245 EQDDILNTMENVLR 258
               +++    +LR
Sbjct: 127 AYTVLMDDCTAMLR 140


>gi|254562170|ref|YP_003069265.1| lysyl-tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254269448|emb|CAX25414.1| putative lysyl-tRNA synthetase (poxA-like) [Methylobacterium
           extorquens DM4]
          Length = 352

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 5/117 (4%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQG--SFYAL 194
              ++ R RI+   R      +F+E     L  S    A    F   + +  G      L
Sbjct: 18  RPLLLTRNRILAGFRAWFAERDFVEVEAAALQVSPGNEAHLSAFATEAILPDGGREPLYL 77

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +P+   + L+A+G  R F +A  FR+ +  +   P EF  L+   +    D ++ 
Sbjct: 78  HTSPEFACKKLLAAGEPRLFSLAHVFRNRERGALHHP-EFTMLEWYRAGESYDALMQ 133



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 13/108 (12%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK-------EVVENRF 522
           + +      A +++L   G E+A+            + F      K         ++  F
Sbjct: 249 RPSPRDPRVAERFELYACGVELANAFGELTDPAEQRRRFEAEMAEKARVYGERYPIDEEF 308

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS--LFPMSQNF 568
                A    MP   GIA G DR+VML  GA  + +V     P +++ 
Sbjct: 309 ---LDALAV-MPEASGIALGFDRLVMLATGAPRIDDVIWTPVPRNRSR 352


>gi|163852421|ref|YP_001640464.1| tRNA synthetase class II (D K and N) [Methylobacterium extorquens
           PA1]
 gi|163664026|gb|ABY31393.1| tRNA synthetase class II (D K and N) [Methylobacterium extorquens
           PA1]
          Length = 352

 Score = 58.9 bits (141), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 5/117 (4%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA--RDFLVPSRVNQG--SFYAL 194
              ++ R RI+   R      +F+E     L  S    A    F   + +  G      L
Sbjct: 18  RPLLLTRNRILAGFRAWFAERDFVEVEAAALQVSPGNEAHLSAFATEAILPDGGREPLYL 77

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             +P+   + L+A+G  R F +A  FR+ +  +   P EF  L+   +    D ++ 
Sbjct: 78  HTSPEFACKKLLAAGEPRLFSLAHVFRNRERGALHHP-EFTMLEWYRAGESYDALMQ 133



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 11/101 (10%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK-------EVVENRF 522
           + +      A +++L   G E+A+            + F      K         ++  F
Sbjct: 249 RPSPRDPRVAERFELYACGVELANAFGELTDPAEQRRRFEAEMAEKARVYGERYPIDEEF 308

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                A    MP   GIA G DR+VML  GA  + +V   P
Sbjct: 309 ---LDALAI-MPEASGIALGFDRLVMLATGAPRIDDVIWTP 345


>gi|223985863|ref|ZP_03635902.1| hypothetical protein HOLDEFILI_03208 [Holdemania filiformis DSM
           12042]
 gi|223962159|gb|EEF66632.1| hypothetical protein HOLDEFILI_03208 [Holdemania filiformis DSM
           12042]
          Length = 51

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%)

Query: 522 FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
                   + G   H G   G +R +M + G +N+R+V  F  +  
Sbjct: 2   LQWYLDLRRYGGCQHAGFGLGFERFIMYVTGMQNIRDVIPFARTPK 47


>gi|222106967|ref|YP_002547758.1| lysyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221738146|gb|ACM39042.1| lysyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 357

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 49/154 (31%), Gaps = 13/154 (8%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPS---RVNQGSFYALPQAPQQ 200
           R  I  ++R      +F+E     L  S   E        S      Q     L  +P+ 
Sbjct: 30  RNAIQAALRLYFSRNDFLEVDAATLQVSPGNEAHLHAFATSAIGNDGQSHPLYLHTSPEF 89

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
             + L+A+G  R    A  +R+ +      P EF  L+   +    + ++     +L   
Sbjct: 90  ACKKLLAAGESRIACFAHVYRNRERGPLHHP-EFTMLEWYRAGETYERLMADCAAILALA 148

Query: 261 FEEF--------SNGNTVSNNFLRICYDDAIRRY 286
            E                   F R+   DA  R+
Sbjct: 149 AETTGTRQFTFRGGVCDPFAPFERLSVADAFERH 182



 Score = 50.8 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 5/89 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGMP 534
           A +++L   G E+A+        +   + F      K+               A    MP
Sbjct: 264 AERFELYACGVELANAFGELTDPQEQRRRFMLEMAEKQRVYGETYPLDEDFLEALAI-MP 322

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              GIA G DR+V+L  GA+ + +V   P
Sbjct: 323 EASGIALGFDRLVLLATGAQRIDQVLWTP 351


>gi|332084295|gb|EGI89498.1| lysyl-tRNA synthetase domain protein [Shigella dysenteriae 155-74]
          Length = 37

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/34 (44%), Positives = 22/34 (64%)

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
           MPP  G+  GIDR++ML   +  +R+V LFP  +
Sbjct: 1   MPPTAGLGIGIDRMIMLFTNSHTIRDVILFPAMR 34


>gi|255584663|ref|XP_002533054.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223527152|gb|EEF29324.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 657

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 6/95 (6%)

Query: 472 NDLLSIKAFQYDLVCN-GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           ND     A  +D+V   G  + +G        V+ +  + +G+ K     ++        
Sbjct: 562 NDDGKTVA-AFDMVVPKGGTLITGSQNEERINVLNERINELGLPK----EQYEWCLDLRG 616

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
            G   H G + G D +V+   G  +VR+   FP S
Sbjct: 617 HGTVEHSGFSFGFDLMVLFATGIPDVRDAIPFPRS 651



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 52/149 (34%), Gaps = 7/149 (4%)

Query: 39  LDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSA 98
           L + D   +  +    +S+     + +     +  +G++    ++  +      +I L  
Sbjct: 163 LLVSDGSCVASLQVTVESSEALPFQPLPIGTCILAEGILNQLPSQDKH------RIGLEV 216

Query: 99  QKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA 158
           +KI  +   E+   P+  +R  P            R  T+   +  R+ +  +       
Sbjct: 217 EKILHIGKVEDDKYPLSRKR-VPLETLRSCSHFRPRTTTVASVMRIRSALTFATYTFFQD 275

Query: 159 ENFIECSTPILTASSPEGARDFLVPSRVN 187
             F+    PI+T +   G  +    + ++
Sbjct: 276 HGFLSVHVPIITTTDGAGFSEKFRVTTLS 304



 Score = 54.7 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 32/90 (35%), Gaps = 3/90 (3%)

Query: 188 QGSFYALPQ---APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
              F++ P       +      A      +   P FR +     +   E + ++ EM+F 
Sbjct: 388 PEDFFSQPTYLTVSGRLHLESYACALGNVYSFGPRFRADRRVFAKHVPEMWMVEAEMAFS 447

Query: 245 EQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
           + +  +N  E+ L+ + +      +    F
Sbjct: 448 DLEGAMNCAEDYLKFLCKWVLENCSEDMKF 477


>gi|149916|gb|AAA25350.1| ORFI [Mycobacterium leprae]
          Length = 59

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              A +  MPP  G   GIDR++M L G  ++RE  LFP
Sbjct: 15  FLAALEYAMPPCTGTGMGIDRLLMSLTGL-SIRETVLFP 52


>gi|23011198|ref|ZP_00051631.1| COG2269: Truncated, possibly inactive, lysyl-tRNA synthetase (class
           II) [Magnetospirillum magnetotacticum MS-1]
          Length = 255

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 5/101 (4%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE-NRF---GGL 525
           + +      A +++L   G E+A+            + F      K  V   R+      
Sbjct: 152 RPSPRDPRVAERFELYACGVELANAFGELTDPAEQRRRFEAEMAEKVRVYGERYPIDEDF 211

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
             A    MP   GIA G DR+VML  GA  + +V   P+++
Sbjct: 212 LDALAI-MPEASGIALGFDRLVMLATGAPRIDDVIWTPVTR 251


>gi|328675691|gb|AEB28366.1| Lysyl-tRNA synthetase-related protein [Francisella cf. novicida
           3523]
          Length = 307

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 4/121 (3%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           NI KR   +  +R      + +E  TP+  A        F+    +N  +     Q+  +
Sbjct: 5   NIKKRAEYLAKIRNFFKDLDVLEVDTPL--AYDYAVTDPFIDVFSINTIAGKRYLQSSPE 62

Query: 201 Y-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
           Y  + L+A+G    +QI   FRDE         EF  ++     ++   ++  M+ +   
Sbjct: 63  YAMKRLLAAGSGSIYQICKAFRDEPCGKLHNH-EFTMMEWYRVGIDYYQLMQEMQKLFAM 121

Query: 260 V 260
           +
Sbjct: 122 L 122



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 80/212 (37%), Gaps = 24/212 (11%)

Query: 355 GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAA 414
           G+ Y     +     A +    + + +   E      ++   D+C              A
Sbjct: 105 GIDYYQLMQEMQKLFAMLKANLEFIYLSYQETFEKYYNINPHDTCL---------AELQA 155

Query: 415 DARNHIAQELGIINCNCFEFCWIMDFPFYEWNEE-----EKKIDFAHNPFTMPQGGMESL 469
             R ++ +  G+ N    +   I     + +  E     +  I F ++ +T+ Q  +   
Sbjct: 156 LVRENVGEIQGLKNPTIADCLDI----LFSYKIEKHLNQQNTIYFIYD-YTIHQSALARK 210

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----L 525
             +    + A ++++ CNG E+A+G       +  L+ F +   +++  +         L
Sbjct: 211 VKDKNSQLVAARFEVFCNGIELANGYYELIDKKEQLKRFESDLATRKKQQKALLDIDTKL 270

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
               +  +P   G+A G DR++M L G  N++
Sbjct: 271 LECLEN-IPECSGVALGFDRLLMSLEGIGNIK 301


>gi|170738727|ref|YP_001767382.1| lysine--tRNA ligase [Methylobacterium sp. 4-46]
 gi|168193001|gb|ACA14948.1| Lysine--tRNA ligase [Methylobacterium sp. 4-46]
          Length = 350

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 5/113 (4%)

Query: 461 MPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS-NVGISKEVVE 519
            P       + +      A +++L   G E+A+G      ++   + F+  +   + +  
Sbjct: 239 YPIPEAALARPSPADPRVAERFELYACGVELANGFGELTDADEQRRRFAAEMDEKERIYG 298

Query: 520 NRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFC 569
            R+        A    MP   GIA G DR+VML  GA+ + EV   P+++   
Sbjct: 299 ERYPVDEDFLAALAR-MPEASGIALGFDRLVMLATGARRIEEVIWTPVAEPGR 350



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 5/116 (4%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRV----NQGSFYAL 194
              ++ R RI  ++R       F+E  T  L  S           +R      +G    L
Sbjct: 17  RPRLLARNRIKAALRAWFAERGFVEVETAALQVSPGNETHLSAFATRAIGPDGRGQPLYL 76

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
             +P+   + L+A+G  R    AP +R+ +      P EF  ++   +    + ++
Sbjct: 77  HTSPEFACKKLLAAGERRLVVFAPVYRNRERGPLHHP-EFTLVEWYRAGDGCEALM 131


>gi|110835308|ref|YP_694167.1| lysyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|110648419|emb|CAL17895.1| lysyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 311

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 23/131 (17%)

Query: 437 IMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGI 496
           + DFP             A       + G          +I A ++++   G E+A+G  
Sbjct: 196 VTDFP---------GWAAALAQTHKDKDG----------AIVAKRFEVYYRGLELANGYQ 236

Query: 497 RNHMSEVMLQAFSNVGISKEVV----ENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
               ++   Q F      +             L  A   G+P   G+A G++R++M    
Sbjct: 237 ELTDAQEQSQRFQRDNALRLEQGLPPMAPDAYLLDAMTSGLPECSGVAVGVERLLMAQQP 296

Query: 553 AKNVREVSLFP 563
              + +V  FP
Sbjct: 297 PLTIDQVLTFP 307



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 5/117 (4%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           R  +++++R    A   +E  TP L      G  D  +      G +  L  +P+ + + 
Sbjct: 16  RAELLSTVRAFFDARQVLEVDTPQLARY---GVSDPHIQCIAVPG-YGYLQSSPEYHMKR 71

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
           L+A+G    +Q+   FR+ +      P EF  L+        + +++    +   +F
Sbjct: 72  LLAAGSGPIYQLCKAFREGEAGGRHNP-EFTMLEWYRPGFSLNQLVSECLALFAELF 127


>gi|328676635|gb|AEB27505.1| Lysyl-tRNA synthetase-related protein [Francisella cf. novicida
           Fx1]
          Length = 307

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 75/218 (34%), Gaps = 23/218 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           NI KR   +  +R      + +E  TP+  A        F+    +N  +     Q+  +
Sbjct: 5   NIKKRAEYLAKIRNFFKDLDVLEVDTPL--AYDYAVTDPFIDVFSINTVAGKRYLQSSPE 62

Query: 201 Y-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL-- 257
           Y  + L+A+G    +QI   FRDE         EF  ++     ++   ++  M+ +   
Sbjct: 63  YAMKRLLAAGSGSIYQICKAFRDEPCGKLHNH-EFTMIEWYRVGIDYYQLMQEMQKLFIM 121

Query: 258 ------------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
                       + VFE++ N N        +           +   LRNP  + +  + 
Sbjct: 122 LKANLEFIYLSYQEVFEKYYNINPHDICLAELQAIVKENV--GEIQGLRNP-TIADCLDI 178

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
                +++   +   N  Y ++          R   D+
Sbjct: 179 LFS--YKIEKNLNQQNTIYFIYDYTIHQSALARKVRDK 214



 Score = 53.9 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 5/103 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +T+ Q  +     +    + A ++++ CNG E+A+G       +   + F N   +++  
Sbjct: 200 YTIHQSALARKVRDKNSQLVAARFEVFCNGIELANGYYELIDKKEQSKRFENDLATRKQQ 259

Query: 519 ENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           +         L    +  +P   G+A G DR++M L G  N++
Sbjct: 260 QKALLDIDTKLLECLEN-IPECSGVALGFDRLLMSLEGISNIK 301


>gi|218507800|ref|ZP_03505678.1| lysyl-tRNA synthetase protein [Rhizobium etli Brasil 5]
          Length = 128

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 9/110 (8%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP------EGARDFLVPSRVNQGSFY 192
              ++ R  I  ++R     E+FIE  T +L  S          A + L      Q + +
Sbjct: 20  RPFLIGRNAIQAALRGFFAREDFIEVDTAVLQVSPGNEAHLHAFATEALTTD--GQMAPF 77

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMS 242
            L  +P+   + L+A+G  R    A  +R+ +      P EF  L+   +
Sbjct: 78  YLHTSPEFACKKLLAAGEQRISCFAHVYRNRERGPLHHP-EFTMLEWYRA 126


>gi|187932052|ref|YP_001892037.1| tRNA synthetase class II (D, K and N) [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|254369741|ref|ZP_04985751.1| hypothetical protein FTAG_01073 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|254372533|ref|ZP_04988022.1| hypothetical protein FTCG_00095 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151570260|gb|EDN35914.1| hypothetical protein FTCG_00095 [Francisella novicida GA99-3549]
 gi|157122700|gb|EDO66829.1| hypothetical protein FTAG_01073 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|187712961|gb|ACD31258.1| tRNA synthetase class II (D, K and N) [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 307

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 76/219 (34%), Gaps = 25/219 (11%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--GSFYALPQAP 198
           NI KR   +  +R      + +E  TP+  A        F+    +N   G  Y L  +P
Sbjct: 5   NIKKRAEYLAKIRNFFKDLDVLEVDTPL--AYDYAVTDPFIDVFSINTVAGKKY-LQSSP 61

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL- 257
           +   + L+A+G    +QI   FRDE         EF  ++     ++   ++  M+ +  
Sbjct: 62  EYAMKRLLAAGSGSIYQICKAFRDEPCGKLHNH-EFTMIEWYRVGIDYYQLMQEMQKLFT 120

Query: 258 -------------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTE 304
                        + VFE++ N N        +           +   LRNP  + +  +
Sbjct: 121 MLKANLEFIYLSYQEVFEKYYNINPHDICLAELQAIVKENV--GEIQGLRNP-TIADCLD 177

Query: 305 HFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
                 +++   +   N  Y ++          R   D+
Sbjct: 178 ILFS--YKIEKNLNQQNTIYFIYDYTIHQSALARKVRDK 214



 Score = 53.9 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 5/103 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +T+ Q  +     +    + A ++++ CNG E+A+G       +   + F N   +++  
Sbjct: 200 YTIHQSALARKVRDKNSQLVAARFEVFCNGIELANGYYELIDKKEQSKRFENDLATRKQQ 259

Query: 519 ENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           +         L    +  +P   G+A G DR++M L G  N++
Sbjct: 260 QKALLDIDTKLLECLEN-IPECSGVALGFDRLLMSLEGISNIK 301


>gi|146329769|ref|YP_001209514.1| lysyl-RNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|146233239|gb|ABQ14217.1| lysyl-RNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 303

 Score = 58.2 bits (139), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 54/130 (41%), Gaps = 5/130 (3%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           + + I  R + + S+R     +N +E  T +L   SP G  D +    +       L  +
Sbjct: 1   MREKIAARAQFLTSIRQFFAQKNVLEVDTALL---SPAGVTD-INLRSLAVEDLGYLITS 56

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+   + L+A G    +Q++  FR ++    +   EF  L+          +++ +  ++
Sbjct: 57  PEYAMKALLADGGGDIYQLSHVFRGDE-NGRKHRREFTLLEWYRLGWTHQQLIHEVSELV 115

Query: 258 RGVFEEFSNG 267
           + +F +    
Sbjct: 116 QTLFPKTEKF 125



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 10/106 (9%)

Query: 463 QGGMESLKGNDLLSIKAFQYDLVCNG-------FEIASGGIRNHMSEVMLQAFSNVGISK 515
           Q  +  +  N      A +++L  +G       +E+A+   + H  E+  Q     G+  
Sbjct: 201 QAALARIMQNKQGHNVAARFELYIDGIELCNGFWELANAKEQRHRFELDNQERLAAGLKP 260

Query: 516 EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
             ++  F     A + G+P   G+A G+DR+ ML  G  ++ EV L
Sbjct: 261 MPIDEAF---LSALERGLPDCAGVALGVDRLFMLAQGKNHIAEVIL 303


>gi|208778959|ref|ZP_03246305.1| tRNA synthetases class II (D, K and N) family protein [Francisella
           novicida FTG]
 gi|208744759|gb|EDZ91057.1| tRNA synthetases class II (D, K and N) family protein [Francisella
           novicida FTG]
          Length = 307

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 76/218 (34%), Gaps = 23/218 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           NI KR   +  +R      + +E  TP+  A        F+    +N  +     Q+  +
Sbjct: 5   NIKKRAEYLAKIRNFFKDLDVLEVDTPL--AYDYAVTDPFIDVFSINTVAGKRYLQSSPE 62

Query: 201 Y-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL-- 257
           Y  + L+A+G    +QI   FRDE         EF  ++     ++   ++  M+ +   
Sbjct: 63  YAMKRLLAAGSGSIYQICKAFRDEPCGKLHNH-EFTMIEWYRVGIDYYQLMQEMQKLFTM 121

Query: 258 ------------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
                       + VFE++ N N  +     +           +   LRNP  + +  + 
Sbjct: 122 LKANLEFIYLSYQEVFEKYYNINPHNICLAELQAIVKENV--GEIQGLRNP-TIADCLDI 178

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
                +++   +   N  Y ++          R   D+
Sbjct: 179 LFS--YKIEKNLNQQNTIYFIYDYTIHQSALARKVRDK 214



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 5/103 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +T+ Q  +     +    + A ++++ CNG E+A+G       +   + F N   +++  
Sbjct: 200 YTIHQSALARKVRDKNSQLVAARFEVFCNGIELANGYYELIDKKEQSKRFENDLATRKQQ 259

Query: 519 ENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           +         L    +  +P   G+A G DR++M L G  N++
Sbjct: 260 QKALLDIDTKLLECLEN-IPECSGVALGFDRLLMSLEGISNIK 301


>gi|254373994|ref|ZP_04989476.1| lysyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|151571714|gb|EDN37368.1| lysyl-tRNA synthetase [Francisella novicida GA99-3548]
          Length = 307

 Score = 58.2 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 75/218 (34%), Gaps = 23/218 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           NI KR   +  +R      + +E  TP+  A        F+    +N  +     Q+  +
Sbjct: 5   NIKKRAEYLAKIRNFFKDLDVLEVDTPL--AYDYAVTDPFIDVFSINTVAGKRYLQSSPE 62

Query: 201 Y-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL-- 257
           Y  + L+A+G    +QI   FRDE         EF  ++     ++   ++  M+ +   
Sbjct: 63  YAMKRLLAAGSGSIYQICKAFRDEPCGKLHNH-EFTMIEWYRVGIDYYQLMQEMQKLFTM 121

Query: 258 ------------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
                       + VFE++ N N        +           +   LRNP  + +  + 
Sbjct: 122 LKANLEFIYLSYQEVFEKYYNINPHDICLAELQAIVKENV--GEIQGLRNP-TIADCLDI 178

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
                +++   +   N  Y ++          R   D+
Sbjct: 179 LFS--YKIEKNLNQQNTIYFIYDYTIHQSALARKVRDK 214



 Score = 53.9 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 5/103 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +T+ Q  +     +    + A ++++ CNG E+A+G       +   + F N    ++  
Sbjct: 200 YTIHQSALARKVRDKNSQLVAARFEVFCNGIELANGYYELIDKKEQSKRFENDLAMRKQQ 259

Query: 519 ENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           +         L    +  +P   G+A G DR++M L G  N++
Sbjct: 260 QKALLDIDTKLLECLEN-IPECSGVALGFDRLLMSLEGISNIK 301


>gi|296112635|ref|YP_003626573.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295920329|gb|ADG60680.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 323

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 69/173 (39%), Gaps = 23/173 (13%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY-------- 192
           N  KR +++  +R    A N +E +TPIL+      A +  V  +  Q +F         
Sbjct: 13  NAKKRAQMLQHIRAFFEARNIMEVTTPILSQ-----AANTDVYIQSVQATFQGATGQTKG 67

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+   + L+A+     +QI   FRD + +  R   EF  L+        D + + 
Sbjct: 68  YLHTSPEFAMKRLLAAYQTPIYQICQVFRDNE-KGHRHNIEFTMLEWYRPNFSLDALADE 126

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP--DLRNPIIMHNVT 303
           +  +L  V+++         +  +I Y  A   Y    P  D+  P I+    
Sbjct: 127 LSELLSVVYQK-------PIHLTQISYAQAFVHYLGIHPFDDMNTPDILRQCA 172



 Score = 47.8 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
            A +++L  +G EIA+       S+ +L+ F      +      +      L  A    +
Sbjct: 231 IARRFELYIHGIEIANAYDELANSQELLKRFEQDNHERHRQGLPIMPIDYRLLAACDH-L 289

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           P   GIA GIDR+ M+L G  N+ +   
Sbjct: 290 PDCCGIALGIDRLFMVLQGQLNINQAIA 317


>gi|258545301|ref|ZP_05705535.1| lysyl-tRNA synthetase family protein GenX [Cardiobacterium hominis
           ATCC 15826]
 gi|258519404|gb|EEV88263.1| lysyl-tRNA synthetase family protein GenX [Cardiobacterium hominis
           ATCC 15826]
          Length = 303

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 10/93 (10%)

Query: 476 SIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVG-------ISKEVVENRFGGLYRA 528
             KA +++L  NG E+ +G      +      F           + +  ++  F     A
Sbjct: 212 DGKAARFELYINGLELCNGFWELSDAREQRARFLADNSERAQLGLPEMPLDEAF---LAA 268

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
            + G+P   G+A G+DR++ML  GA ++ EV L
Sbjct: 269 LERGLPDSAGVALGVDRLLMLACGAAHIDEVML 301



 Score = 46.2 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 31/160 (19%)

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECST----------PILTASSPEGARDFLVPSRV 186
            +   I +R R + ++R    A   +E  T          P L + +  G          
Sbjct: 4   PMRHLITRRARFLAAIRAFFAARGVLEVDTAQLRPCGVTDPQLVSLAASGG--------- 54

Query: 187 NQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
                  L  +P+   ++L+A G    +Q+A  FR E+    +   EF  L+   +  + 
Sbjct: 55  ------YLQTSPEYAMKILLAQGAGDIYQLAHVFRGEEQG-RKHRREFMLLEWYRTGYDH 107

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRY 286
             +++ + +++R +          +    R  Y +A R++
Sbjct: 108 LRLMDEVADLVRELL-----PACRAWQIRRTPYAEAFRQH 142


>gi|326569794|gb|EGE19844.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 324

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 69/173 (39%), Gaps = 23/173 (13%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY-------- 192
           N  KR +++  +R    A N +E +TPIL+      A +  V  +  Q +F         
Sbjct: 14  NAKKRAQMLQHIRAFFEARNIMEVTTPILSQ-----AANTDVYIQSVQATFQGATGQAKG 68

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+   + L+A+     +QI   FRD + +  R   EF  L+        D + + 
Sbjct: 69  YLHTSPEFAMKRLLAAYQTPIYQICQVFRDNE-KGHRHNIEFTMLEWYRPNFSLDALADE 127

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP--DLRNPIIMHNVT 303
           +  +L  V+++         +  +I Y  A   Y    P  D+  P I+    
Sbjct: 128 LSELLSVVYQK-------PIHLSQISYAQAFVHYLGIHPFDDMSTPDILRQCA 173



 Score = 47.4 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 11/91 (12%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS-------NVGISKEVVENRFGGLYRAFQ 530
            A +++L  +G EIA+       S+ +L+ F          G+    +++R   L  A  
Sbjct: 232 IARRFELYIHGVEIANAYDELANSQELLKRFEQDNHERRRQGLPIMPIDHR---LLAACD 288

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
             +P   GIA GIDR+ M+L G  N+ +   
Sbjct: 289 H-LPDCCGIALGIDRLFMVLQGQLNINQAIA 318


>gi|326571294|gb|EGE21316.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis BC1]
          Length = 324

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 69/173 (39%), Gaps = 23/173 (13%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY-------- 192
           N  KR +++  +R    A N +E +TPIL+      A +  V  +  Q +F         
Sbjct: 14  NAKKRAQMLQHIRAFFEARNIMEVTTPILSQ-----AANTDVYIQSVQATFQGATGQTKG 68

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+   + L+A+     +QI   FRD + +  R   EF  L+        D + + 
Sbjct: 69  YLHTSPEFAMKRLLAAYQTPIYQICQVFRDNE-KGHRHNIEFTMLEWYRPNFSLDALADE 127

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP--DLRNPIIMHNVT 303
           +  +L  V+++         +  +I Y  A   Y    P  D+  P I+    
Sbjct: 128 LSELLSVVYQK-------PIHLTQISYAQAFVHYLGIHPFDDMSTPNILRQCA 173



 Score = 50.5 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
            A +++L  NG EIA+       S+ +L+ F      +      +      L  A    +
Sbjct: 232 IARRFELYINGVEIANAYDELANSQELLKRFEQDNHERHRQGLPIMPIDYRLLAACDH-L 290

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           P   GIA GIDR+ M+L G  N+ +   
Sbjct: 291 PDCCGIALGIDRLFMVLQGQLNINQAIA 318


>gi|242056371|ref|XP_002457331.1| hypothetical protein SORBIDRAFT_03g005713 [Sorghum bicolor]
 gi|241929306|gb|EES02451.1| hypothetical protein SORBIDRAFT_03g005713 [Sorghum bicolor]
          Length = 132

 Score = 57.8 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/47 (46%), Positives = 26/47 (55%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           R   CG+LG  D G  VRL GWV   R H G+ FL +RD  G+ Q  
Sbjct: 86  RDALCGELGAGDAGRRVRLCGWVALRRAHAGLTFLTLRDRSGMVQCR 132


>gi|326563869|gb|EGE14120.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
 gi|326566540|gb|EGE16686.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 324

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 23/173 (13%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY-------- 192
           N  KR +++  +R    A N +E +TPIL+      A +  V  +  Q +F         
Sbjct: 14  NAKKRAQMLQHIRAFFEARNIMEVTTPILSQ-----AANTDVYIQSVQATFQGATGQTKG 68

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+   + L+A+     +QI   FRD   +  R   EF  L+        D + + 
Sbjct: 69  YLHTSPEFAMKRLLAAYQTPIYQICQVFRD-HEKGHRHNIEFTMLEWYRPNFSLDALADE 127

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP--DLRNPIIMHNVT 303
           +  +L  V+++         +  +I Y  A   Y    P  D+  P I+    
Sbjct: 128 LSELLSVVYQK-------PIHLTQISYAQAFVHYLGIHPFDDMSTPDILRQCA 173



 Score = 47.8 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
            A +++L  +G EIA+       S+ +L+ F      +      +      L  A    +
Sbjct: 232 IARRFELYIHGVEIANAYDELANSQELLKRFEQDNHERHRQGLPIMPIDYRLLAACDH-L 290

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           P   GIA GIDR+ M+L G  N+ +   
Sbjct: 291 PDCCGIALGIDRLFMVLQGQLNINQAIA 318


>gi|54113913|gb|AAV29590.1| NT02FT1092 [synthetic construct]
          Length = 307

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 75/218 (34%), Gaps = 23/218 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           NI KR   +  +R      + +E  TP+  A        F+    +N  +     Q+  +
Sbjct: 5   NIKKRAEYLAKIRNFFKDLDVLEVDTPL--AYDYAVTDPFIDVFSINTVAGKKYIQSSPE 62

Query: 201 Y-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL-- 257
           Y  + L+A+G    +QI   FRDE         EF  ++     ++   ++  M+ +   
Sbjct: 63  YAMKRLLAAGSGSIYQICKAFRDEPCGKLHNH-EFTMIEWYRVGIDYYQLMQEMQKLFTM 121

Query: 258 ------------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
                       + VFE++ N N        +           +   LRNP  + +  + 
Sbjct: 122 LKANLEFIYLSYQEVFEKYYNINPHDICLAELQAIVKENV--GEIQGLRNP-TIADCLDI 178

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
                +++   +   N  Y ++          R   D+
Sbjct: 179 LFS--YKIEKNLNQQNTIYFIYDYTIHQSALARKVRDK 214



 Score = 53.9 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 5/103 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +T+ Q  +     +    + A ++++ CNG E+A+G       +   + F N   +++  
Sbjct: 200 YTIHQSALARKVRDKNSQLVAARFEVFCNGIELANGYYELIDKKEQSKRFENDLATRKQQ 259

Query: 519 ENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           +         L    +  +P   G+A G DR++M L G  N++
Sbjct: 260 QKALLDIDTKLLECLEN-IPECSGVALGFDRLLMSLEGISNIK 301


>gi|56707618|ref|YP_169514.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670089|ref|YP_666646.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134302446|ref|YP_001122416.1| tRNA synthetase, class II (D, K and N) [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|224456688|ref|ZP_03665161.1| tRNA synthetase, class II (D, K and N) [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|254370135|ref|ZP_04986141.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874438|ref|ZP_05247148.1| tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56604110|emb|CAG45109.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320422|emb|CAL08492.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134050223|gb|ABO47294.1| tRNA synthetase, class II (D, K and N) [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|151568379|gb|EDN34033.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254840437|gb|EET18873.1| tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158775|gb|ADA78166.1| tRNA synthetase, class II (D, K and N) [Francisella tularensis
           subsp. tularensis NE061598]
          Length = 307

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 75/218 (34%), Gaps = 23/218 (10%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQ 200
           NI KR   +  +R      + +E  TP+  A        F+    +N  +     Q+  +
Sbjct: 5   NIKKRAEYLAKIRNFFKDLDVLEVDTPL--AYDYAVTDPFIDVFSINTVAGKKYIQSSPE 62

Query: 201 Y-KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL-- 257
           Y  + L+A+G    +QI   FRDE         EF  ++     ++   ++  M+ +   
Sbjct: 63  YAMKRLLAAGSGSIYQICKAFRDEPCGKLHNH-EFTMIEWYRVGIDYYQLMQEMQKLFTM 121

Query: 258 ------------RGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEH 305
                       + VFE++ N N        +           +   LRNP  + +  + 
Sbjct: 122 LKANLEFIYLSYQEVFEKYYNINPHDICLAELQAIVKENV--GEIQGLRNP-TIADCLDI 178

Query: 306 FVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDR 343
                +++   +   N  Y ++          R   D+
Sbjct: 179 LFS--YKIEKNLNQQNTIYFIYDYTIHQSALARKVRDK 214



 Score = 53.9 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 5/103 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +T+ Q  +     +    + A ++++ CNG E+A+G       +   + F N   +++  
Sbjct: 200 YTIHQSALARKVRDKNSQLVAARFEVFCNGIELANGYYELIDKKEQSKRFENDLATRKQQ 259

Query: 519 ENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
           +         L    +  +P   G+A G DR++M L G  N++
Sbjct: 260 QKALLDIDTKLLECLEN-IPECSGVALGFDRLLMSLEGISNIK 301


>gi|326566878|gb|EGE17017.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326575120|gb|EGE25048.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis CO72]
 gi|326576794|gb|EGE26701.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 324

 Score = 57.8 bits (138), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 23/173 (13%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY-------- 192
           N  KR +++  +R    A N +E +TPIL+      A +  V  +  Q +F         
Sbjct: 14  NAKKRAQMLQHIRAFFEARNIMEVTTPILSQ-----AANTDVYIQSVQATFQGATGQTKG 68

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+   + L+A+     +QI   FRD   +  R   EF  L+        D + + 
Sbjct: 69  YLHTSPEFAMKRLLAAYQTPIYQICQVFRD-HEKGHRHNIEFTMLEWYRPNFSLDALADE 127

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP--DLRNPIIMHNVT 303
           +  +L  V+++         +  +I Y  A   Y    P  D+  P I+    
Sbjct: 128 LSELLSVVYQK-------PIHLTQISYAQAFVHYLGIHPFDDMSTPDILRQCA 173



 Score = 47.4 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 11/91 (12%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS-------NVGISKEVVENRFGGLYRAFQ 530
            A +++L  +G EIA+       S+ +L+ F          G+    +++R   L  A  
Sbjct: 232 IARRFELYIHGVEIANAYDELANSQELLKRFEQDNHERRRQGLPIMPIDHR---LLAACD 288

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
             +P   GIA GIDR+ M+L G  N+ +   
Sbjct: 289 H-LPDCCGIALGIDRLFMVLQGQLNINQAIA 318


>gi|70953346|ref|XP_745780.1| asparagine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56526209|emb|CAH77791.1| asparagine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 605

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 5/101 (4%)

Query: 172 SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLP 231
           +  EG  +       N      L Q+PQ YKQ+++   +++ F+I   +R+E   S +  
Sbjct: 88  NGSEGGSNCFKIENENII----LAQSPQFYKQMIINYDYEKIFEINYSYRNEKFHSTKHL 143

Query: 232 GEFYQLDMEM-SFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
            EF  LD+E   +    +++  + N L+ +    +      
Sbjct: 144 NEFLSLDIEQVIYNNYYEVIIYIYNFLKNIINYINTNFNQE 184



 Score = 49.3 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
              +F     PH G+A G+DR  MLL    N+++ +
Sbjct: 568 YINSFTYSSKPHAGMALGLDRFFMLLFNLTNIKKTT 603


>gi|46447164|ref|YP_008529.1| putative lysyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46400805|emb|CAF24254.1| putative lysyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 300

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 1/106 (0%)

Query: 153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
           R    A   +E   P L+  +   A   L+P+  +Q     L  +P+   + L+A G   
Sbjct: 6   RQFFAARQILEVDCPCLSLRASIDAHIDLIPALYHQQETCYLHSSPEYGMKRLLAEGMGD 65

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            +Q++  FRD +  S   P EF   +      + + ++      +R
Sbjct: 66  CYQLSHVFRDGELSSKHNP-EFMMAEWYRLGFDLEQMIEETVAFIR 110



 Score = 53.9 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR---FGGL-YRAFQCGMP 534
           A ++++   G E+A+G      ++   Q F      +  +  +      L   A +  +P
Sbjct: 209 AERFEIYYKGVELANGYHELTDAKEQEQRFLASNKQRIDLGKKSLPLDFLFLEALEK-LP 267

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSL 561
              G+A G DR++ML   +  + +V  
Sbjct: 268 DCCGVAVGFDRLMMLRHQSTTIADVIA 294


>gi|83282593|ref|XP_729837.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23488802|gb|EAA21402.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 707

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 67/213 (31%), Gaps = 56/213 (26%)

Query: 105 SVAEELPLPVFGEREYPESIR------FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIA 158
           +V +     V    E     R        +  L+ R          +  +I  MR  +  
Sbjct: 441 NVEKNDEKNVEKHDEKNVEKREIEYSPNDHACLNYRNSINQLIFNLKNLVIKKMRQILEE 500

Query: 159 ENFIECSTPILTA---------------------------------------------SS 173
           + +IE  TP LT                                              + 
Sbjct: 501 DKYIEIFTPKLTRIDKPPKNENNSPNQTDDSNYNVQTEMNNNINKIKQNYDKTNFTELNG 560

Query: 174 PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGE 233
            EG  +       N      L Q+ Q YKQ+++   +++ F+I   +R+E   S +   E
Sbjct: 561 SEGGSNCFKIENENII----LAQSSQFYKQMIINYDYEKIFEINYSYRNEKFHSTKHLNE 616

Query: 234 FYQLDMEM-SFVEQDDILNTMENVLRGVFEEFS 265
           F  LD+E   +    +++  + N L+ +    +
Sbjct: 617 FLSLDIEQVIYNNHYEVIIYIYNFLKKIINYVN 649


>gi|326577529|gb|EGE27406.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 324

 Score = 57.4 bits (137), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 69/173 (39%), Gaps = 23/173 (13%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY-------- 192
           N  KR +++  +R    A N +E +TPIL+      A +  V  +  Q +F         
Sbjct: 14  NAKKRAQMLQHIRAFFEARNIMEVTTPILSQ-----AANTDVYIQSVQATFQGATGQAKG 68

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+   + L+A+     +QI   FRD + +  R   EF  L+        D + + 
Sbjct: 69  YLHTSPEFAMKRLLAAYQTPIYQICQVFRDNE-KGHRHNIEFTMLEWYRPNFSLDALADE 127

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP--DLRNPIIMHNVT 303
           +  +L  V+++         +  +I Y  A   Y    P  D+  P I+    
Sbjct: 128 LSELLSVVYQK-------PIHLTQISYAQAFVHYLGIHPFDDMNTPNILRQCA 173



 Score = 48.1 bits (113), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
            A +++L  +G EIA+       S+ +L+ F      +      +      L  A    +
Sbjct: 232 IARRFELYIHGVEIANAYDELANSQELLKRFEQDNHERHRQGLPIMPIDYRLLAACDH-L 290

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           P   GIA GIDR+ M+L G  N+ +   
Sbjct: 291 PDCCGIALGIDRLFMVLQGQLNINQAIA 318


>gi|297620471|ref|YP_003708608.1| putative lysyl-tRNA synthetase-like protein [Waddlia chondrophila
           WSU 86-1044]
 gi|297375772|gb|ADI37602.1| putative lysyl-tRNA synthetase-like protein [Waddlia chondrophila
           WSU 86-1044]
          Length = 314

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 44/109 (40%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           F   Q  +   K      + + ++++   G E+A+G      SE   +       ++E +
Sbjct: 204 FPATQAALAKTKKRGEEEV-SERFEVFHKGMELANGYHELTDSEEQYERLLITNSTRERL 262

Query: 519 ENRF----GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                       +A + G+P   G++ G DR++ML     ++ +V   P
Sbjct: 263 SKDTLPIDDSFIKALERGLPDCCGVSVGFDRLMMLRHQMDDIADVIPLP 311



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 1/115 (0%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL 204
           R+ ++   R   +  N +E   P ++ S+       L          + L  +P+   + 
Sbjct: 12  RSEMLAKAREFFLRRNVLEVDCPAMSKSASIDVHIDLYRCYGASQKTFYLHSSPEYGMKK 71

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259
           L+A G    +Q+   FRD +  S R   EF   +     V    I+      ++ 
Sbjct: 72  LLAEGIGDIYQLGHVFRDNE-YSMRHNPEFTMAEWYRVKVPFSAIIEETVEFIQE 125


>gi|126642671|ref|YP_001085655.1| putative lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 291

 Score = 57.0 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV- 517
           F      +  +K ++     A ++++   G E+A+       ++V+   F      +   
Sbjct: 180 FPPEMASLAKVKLDEDGEEVAARFEVYIEGLELANAYDELLDADVLRSRFEADNAERAKQ 239

Query: 518 ---VENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              V      L  A    MP   GIA G+DR++M+      + +V  FP
Sbjct: 240 GLHVMPLDEHLLAALPH-MPECSGIALGVDRLLMVATDQLKIEKVIAFP 287



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 44/104 (42%), Gaps = 4/104 (3%)

Query: 162 IECSTPILTASSPEG---ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAP 218
           +E  TP+++ +       A    +     +     L  +P+   + L+ASG    +QI  
Sbjct: 1   MEVETPVVSQAGVTDVHLASVQALRHINGKLQTQYLQTSPEFAMKRLLASGSGPIYQICK 60

Query: 219 CFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
            FRD++    +   EF  L+     ++   +++   ++L+   +
Sbjct: 61  VFRDDEHG-RKHNSEFTMLEWYRPGLDLKALMHETADLLQTCLQ 103


>gi|326560895|gb|EGE11260.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 324

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 23/173 (13%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY-------- 192
           N  KR +++  +R    A N +E +TPIL+      A +  V  +  Q +F         
Sbjct: 14  NAKKRAQMLQHIRAFFEARNIMEVTTPILSQ-----AANTDVYIQSVQATFQGATGQTKG 68

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+   + L+A+     +QI   FRD   +  R   EF  L+        D + + 
Sbjct: 69  YLHTSPEFAMKRLLAAYQTPIYQICQVFRD-HEKGHRHNIEFTMLEWYRPNFSLDALADE 127

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP--DLRNPIIMHNVT 303
           +  +L  V+++         +  +I Y  A   Y    P  D+  P I+    
Sbjct: 128 LSELLSVVYQK-------PIHLTQISYAQAFVHYLGIHPFDDMSTPNILRQCA 173



 Score = 47.4 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 11/91 (12%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFS-------NVGISKEVVENRFGGLYRAFQ 530
            A +++L  +G EIA+       S+ +L+ F          G+    +++R   L  A  
Sbjct: 232 IARRFELYIHGVEIANAYDELANSQELLKRFEQDNHERRRQGLPIMPIDHR---LLAACD 288

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
             +P   GIA GIDR+ M+L G  N+ +   
Sbjct: 289 H-LPDCCGIALGIDRLFMVLQGQLNINQAIA 318


>gi|326571602|gb|EGE21617.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 324

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 23/173 (13%)

Query: 141 NIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY-------- 192
           N  KR +++  +R    A N +E +TPIL+      A +  V  +  Q +F         
Sbjct: 14  NAKKRAQMLQHIRAFFEARNIMEVTTPILSQ-----AANTDVYIQSVQATFQGATGQAKG 68

Query: 193 ALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            L  +P+   + L+A+     +QI   FRD   +  R   EF  L+        D + + 
Sbjct: 69  YLHTSPEFAMKRLLAAYQTPIYQICQVFRD-HEKGHRHNIEFTMLEWYRPNFSLDALADE 127

Query: 253 MENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP--DLRNPIIMHNVT 303
           +  +L  V+++         +  +I Y  A   Y    P  D+  P I+    
Sbjct: 128 LSELLSVVYQK-------PIHLTQISYAQAFVHYLGIHPFDDMSTPNILRQCA 173



 Score = 47.8 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKE----VVENRFGGLYRAFQCGM 533
            A +++L  +G EIA+       S+ +L+ F      +      +      L  A    +
Sbjct: 232 IARRFELYIHGVEIANAYDELANSQELLKRFEQDNHERHRQGLPIMPIDHRLLAACDH-L 290

Query: 534 PPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           P   GIA GIDR+ M+L G  N+ +   
Sbjct: 291 PDCCGIALGIDRLFMVLQGQLNINQAIA 318


>gi|294678194|ref|YP_003578809.1| lysyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294477014|gb|ADE86402.1| lysyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 349

 Score = 57.0 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 48/138 (34%), Gaps = 10/138 (7%)

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPS--- 184
           R  D RR  L      R RI  ++R  +    F+E     L  S   E        +   
Sbjct: 11  RHAD-RRPALLA----RARIQAALRGWLTDHAFLEVDPVALQVSPGNEAHLHGFATTAIG 65

Query: 185 RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
               G    L  +P+   + L+A+G  R    A  +R+ + R      EF  L+      
Sbjct: 66  NDGAGVPMYLHTSPEFAMKKLLAAGETRIAAFAHVWRNRE-RGPLHSPEFTMLEWYRVGE 124

Query: 245 EQDDILNTMENVLRGVFE 262
           +   ++    + LR   E
Sbjct: 125 DYSVLMQDCADFLRLAAE 142



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 7/96 (7%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVE-NRF---GGLYR 527
           +D     A +++L   G E+A+G      +      F      K  +   R+        
Sbjct: 251 DDPR--VAERFELYACGVELANGFGELTNAAEQRLRFQAEMDEKARIYGERYPIDEDFLA 308

Query: 528 AFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
           A    MP   GIA G DR+VML   A  + +V   P
Sbjct: 309 ALAQ-MPAASGIAMGFDRLVMLATSAPRIDDVIWTP 343


>gi|221135941|ref|XP_002170960.1| PREDICTED: similar to Aspartyl-tRNA synthetase CG3821-PA, partial
           [Hydra magnipapillata]
          Length = 68

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 4/63 (6%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           +  YD+   G EI SG  R H  E + +   +  I+ + ++        +F+ G  PH G
Sbjct: 10  SNSYDMFMRGEEILSGAQRIHDPEFLTERAKHHKIAIDDIKA----YIESFKYGCSPHAG 65

Query: 539 IAA 541
              
Sbjct: 66  GGI 68


>gi|121998757|ref|YP_001003544.1| lysine--tRNA ligase [Halorhodospira halophila SL1]
 gi|121590162|gb|ABM62742.1| Lysine--tRNA ligase [Halorhodospira halophila SL1]
          Length = 316

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 6/102 (5%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISK--- 515
           F   Q  +  L   D  +  A +++   +G EIA+G             F      +   
Sbjct: 209 FPASQAALARLDDADPRT--ARRFECFIDGLEIANGYHELTDPAAQRARFEAEQAERRGA 266

Query: 516 -EVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
            + V +    L  A + G+P   G+A G+DR++ + LGA+++
Sbjct: 267 GQPVYDLDERLLGALERGVPDCAGVALGVDRLLAVALGAESL 308



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 44/118 (37%), Gaps = 2/118 (1%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD-FLVPSRVNQGSFYALPQAP 198
             + +  + +  +R        +E   P L  ++ + A +   VP     G    L  +P
Sbjct: 13  ATVRRVGQKLARIRGFFAERGVVEVQPPCLGPAAMDPALESIPVPGAAADGDAAYLQTSP 72

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENV 256
           +   + ++A+G    + + P +R  +        EF  L+      +   +++ +  +
Sbjct: 73  ESAMKAMLAAGSSDIYYLGPAWRGGERGRW-HATEFTLLEWYRIGFDHHRLMDEVSAL 129


>gi|147773506|emb|CAN66785.1| hypothetical protein VITISV_013512 [Vitis vinifera]
          Length = 410

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 59/222 (26%), Gaps = 59/222 (26%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ-------------- 188
             R  +  +         F+  S+PI+TAS  EGA +    + +                
Sbjct: 22  RVRNALAYATHKFFQENGFVWISSPIITASDCEGAGEQFCVTTLIPSSREATDSTVDAIP 81

Query: 189 ----------GSFYALP---QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFY 235
                       F+  P       Q      A+                           
Sbjct: 82  KAKDGLIDWSQDFFGKPAFLTVSGQLNAETYATALSD----------------------- 118

Query: 236 QLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRN 295
            ++ E++F + +D +      L+ V       +    NF+++ Y DA+            
Sbjct: 119 MIEPELAFADLNDDMACATAYLQYV-------DVAEKNFVQLTYTDAVELLLRANKKFEF 171

Query: 296 PIIM--HNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGG 335
           P+       +EH  +     F     +   Y    +   G  
Sbjct: 172 PVKWGCDLQSEHERYITEVAFGGCPVIIRDYPKACVLTTGKA 213


>gi|160690512|gb|ABX46086.1| aspartyl transcarbamylase [Citrus limon]
          Length = 217

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +       + I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEDEI 212


>gi|160690510|gb|ABX46085.1| aspartyl transcarbamylase [Citrus limon]
          Length = 217

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +       + I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEDEI 212


>gi|149060124|gb|EDM10940.1| rCG63605 [Rattus norvegicus]
          Length = 955

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 52/153 (33%), Gaps = 28/153 (18%)

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P L  +  EG           +  F  L Q  Q Y               A  +RDE  R
Sbjct: 501 PTLVQTQVEGGAILFKLDYFGEEVF--LTQPSQLYLP-------------AQSYRDEQSR 545

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENV------LRGVFEEFSNGNTVSNNFLRICYD 280
           + R   EF  +++E  F+  +D+LN +EN+         V E     +           D
Sbjct: 546 TQRHLAEFAHMEVECPFLNFEDLLNRLENLPFCRMNFSDVIEWLKEHDVKKG-------D 598

Query: 281 DAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
                +G + P+     I  N+ E  +   F V
Sbjct: 599 GTFYEFGDNIPEAPERRITDNINEPILLCRFSV 631


>gi|32527703|gb|AAP86253.1| Ac1-163 [Rattus norvegicus]
          Length = 948

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 52/153 (33%), Gaps = 28/153 (18%)

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P L  +  EG           +  F  L Q  Q Y               A  +RDE  R
Sbjct: 494 PTLVQTQVEGGAILFKLDYFGEEVF--LTQPSQLYLP-------------AQSYRDEQSR 538

Query: 227 SDRLPGEFYQLDMEMSFVEQDDILNTMENV------LRGVFEEFSNGNTVSNNFLRICYD 280
           + R   EF  +++E  F+  +D+LN +EN+         V E     +           D
Sbjct: 539 TQRHLAEFAHMEVECPFLNFEDLLNRLENLPFCRMNFSDVIEWLKEHDVKKG-------D 591

Query: 281 DAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
                +G + P+     I  N+ E  +   F V
Sbjct: 592 GTFYEFGDNIPEAPERRITDNINEPILLCRFSV 624


>gi|160690478|gb|ABX46069.1| aspartyl transcarbamylase [Swinglea glutinosa]
          Length = 217

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ +SV
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRSV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|329894761|ref|ZP_08270562.1| Lysyl-tRNA synthetase-related protein [gamma proteobacterium
           IMCC3088]
 gi|328922750|gb|EGG30083.1| Lysyl-tRNA synthetase-related protein [gamma proteobacterium
           IMCC3088]
          Length = 297

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 11/110 (10%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVML-------QAFSNV 511
           F + Q  +  L  ++     A +++LV  G E+A+G      ++          Q     
Sbjct: 186 FPIEQAALARLGDSE-GRAVAHRFELVIQGVELANGFWELTDADEQHGRFEADNQHRECS 244

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           G  +   + R   L +A + G+P   G+A G DR+V L  G + V +   
Sbjct: 245 GQPRVKPDER---LLQALRAGLPDCAGVALGFDRLVALSSGYRQVSDALA 291



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 14/120 (11%)

Query: 148 IINSMRCRMIAENFIECSTPILTASSPEGARDFL------VPSRVNQGSFYALPQAPQQY 201
           + +++R        +E + P+       GAR         +P RV   + Y L  +P+  
Sbjct: 1   MRSTVRDFFAERQVLEVAAPV------AGARAVTDPQLESIPFRVMNETRY-LQTSPEFA 53

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+A G    + +   FR+++      P EF  L+         D+++ +E+++  V+
Sbjct: 54  LKRLLAQGSGDVYSLGTVFRNDEQGRWHSP-EFTMLEWYRLGFNHHDLMSEVESLVHSVW 112


>gi|171678111|ref|XP_001904005.1| hypothetical protein [Podospora anserina S mat+]
 gi|170937125|emb|CAP61782.1| unnamed protein product [Podospora anserina S mat+]
          Length = 456

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 30/103 (29%), Gaps = 3/103 (2%)

Query: 123 SIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASS-PEGARDFL 181
             R   R LD R           + +       +   +F    TP L     P    D  
Sbjct: 140 EERLDNRLLDARVPATAAIFKLFSGVHELAVEYLKLHDFYHVPTPALVGYEFPGEEDDLF 199

Query: 182 VPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDED 224
                 + +  A     + +  + +++  +R +     FR E 
Sbjct: 200 TVPYFGRTARLAP--TGEIHLGMALSADLERVYDFHTVFRREP 240



 Score = 43.5 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 3/89 (3%)

Query: 452 IDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNV 511
               H P  +      ++  +D        +D++  G E  +G    H +E +  AF+N 
Sbjct: 357 FFITHFPKHLRSC---NIYPSDEQDDTTQSFDVILRGQECVTGCRLLHSAEDLAAAFANR 413

Query: 512 GISKEVVENRFGGLYRAFQCGMPPHGGIA 540
               +     +     A + GMPP GG  
Sbjct: 414 PHPIDPETPEWRPYMTAHEIGMPPWGGFG 442


>gi|282891825|ref|ZP_06300305.1| hypothetical protein pah_c198o010 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498258|gb|EFB40597.1| hypothetical protein pah_c198o010 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 314

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 8/119 (6%)

Query: 449 EKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAF 508
                 +H P    Q  +     +D   + A ++++   G E+A+G      ++   Q F
Sbjct: 194 NGLFVLSHYP--ASQAALAQTVTHDDEHV-AERFEVYFEGVELANGYHELANAQEQRQRF 250

Query: 509 SNVGISKEVVENR-----FGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
                 +E    +           A + G+P   G+A G DR++ML     ++ EV  F
Sbjct: 251 IEANKHREERLGKEPLPIDEHFLAALEKGLPNCCGVAVGFDRLMMLRHHCLSLAEVIPF 309



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 45/115 (39%), Gaps = 3/115 (2%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQ 203
           R ++++  R        +E   P+++  ++ +   D +          Y L  +P+   +
Sbjct: 10  RAQMLSRARQFFSHRGVLEVDCPMISRYAAVDEHIDLIPVQYAGANRRY-LHSSPEYGMK 68

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            L+  G    +Q+A  FRD +      P EF   +        ++++    + +R
Sbjct: 69  RLIVDGMGDIYQLAHVFRDGEYGRKHNP-EFMMAEWYRLGFSFNEMILETVDFVR 122


>gi|160690554|gb|ABX46107.1| aspartyl transcarbamylase [Citrus maxima]
          Length = 217

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVXPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNXSIVDVIGVVSVPNVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|289548789|ref|YP_003473777.1| lysine--tRNA ligase [Thermocrinis albus DSM 14484]
 gi|289182406|gb|ADC89650.1| Lysine--tRNA ligase [Thermocrinis albus DSM 14484]
          Length = 290

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 6/120 (5%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTAS---SPEGARDFLVPSRVNQG-SFYALPQAPQQ 200
            ++ I+ +R       F+E  TPIL       P       V  +  +G     L  +P+ 
Sbjct: 5   WSKFIDKVRSFFKERGFLEVHTPILQQYPNLDP-NVEPMEVLVKEKEGKKKMWLHTSPEH 63

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
             + +++      FQI   FR+ +      P EF  L+      + + ++  + ++L+ +
Sbjct: 64  AMKKILSKEKKDIFQICKVFRNGEWGRFHHP-EFTMLEWYRINADYNLLIQDIVDLLKYL 122



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 41/89 (46%), Gaps = 3/89 (3%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
           + +    A +++L   G EIA+G        ++ Q        +++  +    L +A + 
Sbjct: 203 SKVKDGYAERFELYIKGVEIANGWTEETDPTIIRQRMETFSRGRDLPVDE--ELIKAME- 259

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
            MPP  G + G++R+ M++    ++R + 
Sbjct: 260 SMPPCAGCSIGLERLFMVIHNIDDIRRLI 288


>gi|160690514|gb|ABX46087.1| aspartyl transcarbamylase [Citrus amblycarpa]
          Length = 217

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPNVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|160690492|gb|ABX46076.1| aspartyl transcarbamylase [Citrus webberi]
          Length = 217

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPNVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|160690482|gb|ABX46071.1| aspartyl transcarbamylase [Citrus medica]
          Length = 217

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ +  
Sbjct: 94  VGALNASLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFA 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVISVPXVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|160690476|gb|ABX46068.1| aspartyl transcarbamylase [Atalantia ceylanica]
          Length = 218

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 95  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 154

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 155 RSLSNESIVDVIGVVSVPNVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 213


>gi|240949264|ref|ZP_04753608.1| asparaginyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240296380|gb|EER47024.1| asparaginyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 57

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%)

Query: 520 NRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
             +       +     H G   G +R+++ + G +N+REV  FP +  
Sbjct: 6   EDYWWYRDLRRYDTVQHSGFGLGFERLIVYVTGLQNIREVIPFPRAPR 53


>gi|15889813|ref|NP_355494.1| lysyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|9957273|gb|AAG09300.1|AF177860_3 lysyl-tRNA synthetase homolog [Agrobacterium tumefaciens]
 gi|15157745|gb|AAK88279.1| lysyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 354

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 15/161 (9%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP-EGARDFLVPSRVNQG---SFYAL 194
              ++ R  I ++ R      +F+E  T  L  S   E          +  G       L
Sbjct: 21  RAFLLGRNAIQSAFRGYFARADFLEVDTATLQVSPGNEAHLHAFATDGLTPGGEAVPLYL 80

Query: 195 PQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTME 254
             +P+   + L+A+G  R    A  +R+ +      P EF  L+        + ++    
Sbjct: 81  HTSPEFACKKLLAAGEKRISCFAHVYRNRERGPLHHP-EFTMLEWYRVGETYESLMKDSA 139

Query: 255 NVLRGVFEEFSNGNTVSNNFL---------RICYDDAIRRY 286
           N+L  +  E +     +             R+   +A  RY
Sbjct: 140 NLL-ALAAETTGTKHFTYRGRSVDPFLEPERLSVAEAFERY 179



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 3/97 (3%)

Query: 470 KGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAF 529
           + +   +  A +++L   G E+A+       +    + F      K  V      L   F
Sbjct: 252 RKSPGDARVAERFELYACGVELANAFGELTDAAEQRRRFEMEMAEKLRVYGETYPLDEDF 311

Query: 530 QCG---MPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
                 MPP  GIA G DR+VML  GA  +  V   P
Sbjct: 312 LAALAIMPPASGIALGFDRLVMLATGAPRIDLVMWAP 348


>gi|294879387|ref|XP_002768669.1| hypothetical protein Pmar_PMAR012198 [Perkinsus marinus ATCC 50983]
 gi|239871384|gb|EER01387.1| hypothetical protein Pmar_PMAR012198 [Perkinsus marinus ATCC 50983]
          Length = 257

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 5/92 (5%)

Query: 10  GDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            D G   +G  V + GWV   R  G G  F++I D   +  +    DS+C +   ++   
Sbjct: 165 ADGGAGLIGKTVSVCGWVRTKRSQGSGFAFVEISDGSCLQGLQLVLDSSCPDFGGAIGQI 224

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQK 100
                 G  +      + +      +E+S ++
Sbjct: 225 A----TGASIQAVGALVASPAKGQAVEVSVRE 252


>gi|160690578|gb|ABX46119.1| aspartyl transcarbamylase [Microcitrus australasica]
 gi|160690580|gb|ABX46120.1| aspartyl transcarbamylase [Microcitrus australasica]
          Length = 217

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLXCVSRAAKTPITIEDASRSEAEI 212


>gi|160690548|gb|ABX46104.1| aspartyl transcarbamylase [Citrus nobilis]
          Length = 217

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|160690546|gb|ABX46103.1| aspartyl transcarbamylase [Citrus nobilis]
          Length = 217

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|160690536|gb|ABX46098.1| aspartyl transcarbamylase [Citrus aurantium]
          Length = 217

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|160690526|gb|ABX46093.1| aspartyl transcarbamylase [Citrus nippokoreana]
 gi|160690528|gb|ABX46094.1| aspartyl transcarbamylase [Citrus nippokoreana]
          Length = 217

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|160690516|gb|ABX46088.1| aspartyl transcarbamylase [Citrus amblycarpa]
 gi|160690524|gb|ABX46092.1| aspartyl transcarbamylase [Citrus reticulata]
 gi|160690530|gb|ABX46095.1| aspartyl transcarbamylase [Citrus reshni]
          Length = 217

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|160690508|gb|ABX46084.1| aspartyl transcarbamylase [Citrus unshiu]
 gi|160690544|gb|ABX46102.1| aspartyl transcarbamylase [Citrus sinensis]
 gi|160690560|gb|ABX46110.1| aspartyl transcarbamylase [Citrus ichangensis]
          Length = 217

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|160690506|gb|ABX46083.1| aspartyl transcarbamylase [Citrus unshiu]
 gi|160690518|gb|ABX46089.1| aspartyl transcarbamylase [Citrus reticulata]
 gi|160690534|gb|ABX46097.1| aspartyl transcarbamylase [Citrus aurantium]
 gi|160690542|gb|ABX46101.1| aspartyl transcarbamylase [Citrus sinensis]
          Length = 217

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|160690504|gb|ABX46082.1| aspartyl transcarbamylase [Citrus limettioides]
          Length = 217

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|160690502|gb|ABX46081.1| aspartyl transcarbamylase [Citrus limettioides]
          Length = 217

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|160690480|gb|ABX46070.1| aspartyl transcarbamylase [Citrus medica]
 gi|160690486|gb|ABX46073.1| aspartyl transcarbamylase [Citrus medica]
 gi|160690488|gb|ABX46074.1| aspartyl transcarbamylase [Citrus halimii]
 gi|160690490|gb|ABX46075.1| aspartyl transcarbamylase [Citrus halimii]
 gi|160690520|gb|ABX46090.1| aspartyl transcarbamylase [Citrus reticulata]
 gi|160690522|gb|ABX46091.1| aspartyl transcarbamylase [Citrus reticulata]
 gi|160690532|gb|ABX46096.1| aspartyl transcarbamylase [Citrus reshni]
 gi|160690556|gb|ABX46108.1| aspartyl transcarbamylase [Citrus maxima]
 gi|160690558|gb|ABX46109.1| aspartyl transcarbamylase [Citrus ichangensis]
 gi|160690562|gb|ABX46111.1| aspartyl transcarbamylase [Citrus hanaju]
 gi|160690564|gb|ABX46112.1| aspartyl transcarbamylase [Citrus hanaju]
          Length = 217

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|85717362|ref|ZP_01048314.1| tRNA synthetase, class II (D, K and N) [Nitrobacter sp. Nb-311A]
 gi|85695837|gb|EAQ33743.1| tRNA synthetase, class II (D, K and N) [Nitrobacter sp. Nb-311A]
          Length = 347

 Score = 55.5 bits (132), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 49/127 (38%), Gaps = 12/127 (9%)

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           R  D RR  L+     RT +  ++R    A+ F+E  T +L  S P        P     
Sbjct: 12  RHAD-RRPFLNA----RTAVTKALRAWFEAQGFVEVETGVLQVS-PGNETHLHAPRTALT 65

Query: 189 GSF-----YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSF 243
                     L  +P+   + L+A+G  +  + A  FRD + R      EF  L+   + 
Sbjct: 66  TPAGNRVTRYLRTSPEFACKKLLAAGEQKIMEFARVFRDRE-RGVLHLPEFTMLEWYRAG 124

Query: 244 VEQDDIL 250
              D ++
Sbjct: 125 SAYDVVI 131



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 63/195 (32%), Gaps = 16/195 (8%)

Query: 376 AKHLNIVNTEAIRVRLDMQDG-DSCFFIAGDPLKFCSFAADARNHIAQELGIINCNCFE- 433
           A  L       +    D   G D    +AG      + A  AR  +     I + + +  
Sbjct: 157 ADPLAEPERLTVAAAFDRFAGIDLLNTVAGREGDRAALAEAARGRV----RITDDDTWSD 212

Query: 434 -FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
            F  +      E  E     +     +  P       + +   S  A ++++   G E+A
Sbjct: 213 IFSKV----LVEHIEPHLGQERLTVLYDYPAPEAALARISPSDSRVAERFEVYACGVELA 268

Query: 493 SGGIRNHMSEVM----LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           +G      +        QA                    A    MP  GG+A G+DR+VM
Sbjct: 269 NGFGELTDAAEQRIRFAQAMDEKQGRYGERYPLDEDFLAAVAQ-MPEAGGVALGLDRLVM 327

Query: 549 LLLGAKNVREVSLFP 563
           L  GA  + +V   P
Sbjct: 328 LASGALRIDQVVWMP 342


>gi|160690484|gb|ABX46072.1| aspartyl transcarbamylase [Citrus medica]
          Length = 217

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ +  
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFA 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPXVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|160690568|gb|ABX46114.1| aspartyl transcarbamylase [Citrus trifoliata]
 gi|160690572|gb|ABX46116.1| aspartyl transcarbamylase [Citrus trifoliata]
          Length = 217

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 3/111 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +  
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIED 204


>gi|160690566|gb|ABX46113.1| aspartyl transcarbamylase [Citrus trifoliata]
 gi|160690570|gb|ABX46115.1| aspartyl transcarbamylase [Citrus trifoliata]
          Length = 217

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 3/111 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +  
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIED 204


>gi|260822038|ref|XP_002606410.1| hypothetical protein BRAFLDRAFT_67661 [Branchiostoma floridae]
 gi|229291751|gb|EEN62420.1| hypothetical protein BRAFLDRAFT_67661 [Branchiostoma floridae]
          Length = 151

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 501 SEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
           +E +L+ +   GI        +       + G  PHGG   G++R +  ++G  ++R+V 
Sbjct: 85  NEELLEGYKREGIDPTP----YYWYTDQRKFGTCPHGGYGLGLERFLCWMMGINHIRDVC 140

Query: 561 LFPM 564
           L+P 
Sbjct: 141 LYPR 144


>gi|225849447|ref|YP_002729612.1| lysyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643587|gb|ACN98637.1| putative lysyl-tRNA synthetase (Lysine--tRNA ligase)(LysRS) (GX)
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 311

 Score = 55.1 bits (131), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 83/235 (35%), Gaps = 22/235 (9%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECST------PILTASSPEGARDFLVPSRVNQGSF 191
           + +   K+++I  S+R        IE  T      P L ++      +  V +   +   
Sbjct: 1   MKEIFEKKSKIYQSIREYFYKTGSIEVFTDILLDYPNLDSNIYP--IELFVFNEKKEKIK 58

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILN 251
             L  +P+   + +++      FQI   FR+ +  S +   EF  L+        +D++ 
Sbjct: 59  KFLHTSPEPKMKKILSQIKSDIFQITKVFRNFE-GSYKHKIEFTMLEWYRVNYNLEDLME 117

Query: 252 TMENVLRG----VFEE----FSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVT 303
             +N+       ++++    +        N+ +I  D+A  +Y    PD  N   M+   
Sbjct: 118 DTKNIFIETAISLYKKPVITYKGKTYDLTNWEKITVDEAFYKYTKIYPD--NIDKMNEFL 175

Query: 304 EHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD---RMNEWARSQGQPG 355
           +          +        Y  +  P  G        D   +++ +A+ +   G
Sbjct: 176 KQNEPFFKESDNWEDLFFHIYAFYVEPNLGVEKPTIIYDYPPQLSAFAKVENGKG 230



 Score = 46.6 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 37/85 (43%), Gaps = 2/85 (2%)

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG- 532
           + + K  +++   NG E+ +G    +  + + +       +K+     +       +   
Sbjct: 225 VENGKGKRFETYINGIELVNGYDELNDPKELEKRLIKDLENKKKEGFNYPLDLEFIEAAK 284

Query: 533 -MPPHGGIAAGIDRIVMLLLGAKNV 556
            +P   G + G+DR +M+LL  K+V
Sbjct: 285 NLPQSAGASLGVDRFIMVLLDLKSV 309


>gi|238590701|ref|XP_002392399.1| hypothetical protein MPER_08028 [Moniliophthora perniciosa FA553]
 gi|215458374|gb|EEB93329.1| hypothetical protein MPER_08028 [Moniliophthora perniciosa FA553]
          Length = 227

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 56/156 (35%), Gaps = 25/156 (16%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           G    G    LSG +H +R  G  ++F D+       Q++A                   
Sbjct: 74  GTKLEGVTESLSGRIHNIRASGSKLVFYDLHAEGSKVQIMATLQ---------------- 117

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL 131
              G V+  +       +  G++ ++A  +  L+      +P        +  R++ R+L
Sbjct: 118 ---GEVVGVTGNPSRTKL--GELSITASTMSDLAR-NLHQIPSSHFGLKDQETRYRKRYL 171

Query: 132 D-LRRDTLHKNIVKRTRIINSMRCR-MIAENFIECS 165
             +  +      + R++IIN +     +   F+E  
Sbjct: 172 VFIISENTRHIFITRSKIINYILKVPPMNMGFMEVE 207


>gi|254282728|ref|ZP_04957696.1| lysyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678931|gb|EED35280.1| lysyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 284

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 43/97 (44%), Gaps = 4/97 (4%)

Query: 162 IECSTPILTASS-PEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCF 220
           +E  TP+L ++   + A + +     +   F  L  +P+   + L+A+G    FQI   F
Sbjct: 1   MEVETPLLASAGVTDPALEPIRVPCADGERF--LQTSPEYAMKRLLAAGSGDIFQICKAF 58

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           R  +    R   E+  L+   + ++   +L  +  +L
Sbjct: 59  RAAEVG-RRHNPEYTLLEWYRTGIDHYQLLREVAELL 94



 Score = 47.8 bits (112), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 48/137 (35%), Gaps = 23/137 (16%)

Query: 430 NCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGF 489
           + +   +++D+P                     Q  +  +         A +++   +G 
Sbjct: 162 STWGIVFVVDYP-------------------PSQASLARILPRGECCATAARFECYVDGV 202

Query: 490 EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGL----YRAFQCGMPPHGGIAAGIDR 545
           E+A+G      +  + + F +              L      A   G+P   G+A G+DR
Sbjct: 203 ELANGYWEETDAVELKRRFDDDNARLTAAGQPARCLDPRFMAAMASGLPDCAGVALGLDR 262

Query: 546 IVMLLLGAKNVREVSLF 562
           ++   LG +N+  +  F
Sbjct: 263 LLACQLGTRNLSGILAF 279


>gi|160690494|gb|ABX46077.1| aspartyl transcarbamylase [Citrus longispina]
 gi|160690496|gb|ABX46078.1| aspartyl transcarbamylase [Citrus longispina]
          Length = 217

 Score = 54.7 bits (130), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G    F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKXAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|209885153|ref|YP_002289010.1| putative lysyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209873349|gb|ACI93145.1| putative lysyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 346

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 43/115 (37%), Gaps = 6/115 (5%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQG---- 189
           R       + +R  I  ++R    AE F+E  T IL  S P              G    
Sbjct: 15  RHQDRQPFLRQRAAITRTVRDWFAAEGFVEVETGILQVS-PGNETHLHALRAEGLGGSGQ 73

Query: 190 SFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFV 244
           +   +  +P+   + L+A+G +R  + A  FR  +  S     EF  L+   +  
Sbjct: 74  TSLYMRTSPEFACKKLLAAGEERIVEFAKVFRGRE-DSPLHLTEFTMLEWYRAGA 127



 Score = 50.1 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 8/126 (6%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEV 503
           E    E ++      F  P       + +   +  A ++++   G E+A+G    + +  
Sbjct: 225 EPKLGEGRLTIL---FDYPSPEAALARTSPQDARVAERFEVYGCGVELANGFGELNDAAE 281

Query: 504 MLQAFS-NVGISKEVVENRF---GGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
             + F+  +   +     R+        A    MP   G+A G DR+VML  GA  + +V
Sbjct: 282 QRRRFAGAMDEKERRYGERYPLDEDFLAALAQ-MPEASGVALGFDRLVMLASGATRLDQV 340

Query: 560 SLFPMS 565
              P+S
Sbjct: 341 VWAPLS 346


>gi|47208666|emb|CAF88673.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 562

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 6/100 (6%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           G  V++ GWVHR+R  G  ++F+ +RD  G  Q V +        A  + +E  + + G 
Sbjct: 106 GQRVKVFGWVHRLRRQGKNLMFIVLRDGTGFLQCVLSDKLCQCYNALVLSTESTVALYGT 165

Query: 77  VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFG 116
           V     E    N +TG   L   +    + A+    P  G
Sbjct: 166 VTPVP-EGKQVNTLTGFFILLLPE----AAADPPLKPFHG 200


>gi|331005533|ref|ZP_08328908.1| Lysyl-tRNA synthetase-like protein [gamma proteobacterium IMCC1989]
 gi|330420653|gb|EGG94944.1| Lysyl-tRNA synthetase-like protein [gamma proteobacterium IMCC1989]
          Length = 314

 Score = 54.3 bits (129), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 47/120 (39%), Gaps = 4/120 (3%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL-VPSRVNQGSFYALPQAPQQYKQ 203
           R ++   +R   +A+  +E   P+L+  +      F+        G    L  +P+ + +
Sbjct: 15  RAKLYQIVREFFLAQQVLEVDVPVLSEYATVD--PFIDSLKTKVLGRTEYLQTSPEFFLK 72

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
            L+A+     + +   FR  +    R   EF  L+       +  ++  + N+L   F E
Sbjct: 73  RLLAAYQHDVYYLGKAFRQGEQG-RRHRPEFTMLEWYRIGWTEQQLIGEVNNLLALFFPE 131



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 5/109 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN----VGIS 514
           +   Q  +  +  +    + A ++++  +  E+A+G    +        F          
Sbjct: 206 YPASQAALAKVAEDAQGQLVAKRFEIYVDKIELANGYWELNEGAEQQARFEQDVDYRQAH 265

Query: 515 KEVVENRFGGLYRAFQCG-MPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              V      L  A   G MP   G+A GIDR++M  LG  ++ +V  F
Sbjct: 266 NLPVLPYDQSLVEALSEGNMPDCAGVALGIDRLLMCWLGTNDMSDVVSF 314


>gi|160690540|gb|ABX46100.1| aspartyl transcarbamylase [Citrus aurantium]
          Length = 217

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVREXVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|160690538|gb|ABX46099.1| aspartyl transcarbamylase [Citrus aurantium]
          Length = 217

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVREXVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|289610261|emb|CBI60290.1| unnamed protein product [Sordaria macrospora]
          Length = 70

 Score = 54.3 bits (129), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 5/70 (7%)

Query: 241 MSFVEQDDILNTMENVLRGVFEEFSNG-----NTVSNNFLRICYDDAIRRYGTDKPDLRN 295
           MSFV Q+D+   +E VL GVFEE+++            F RI Y +++ +YG DKPDLRN
Sbjct: 1   MSFVTQEDVFAAIEPVLHGVFEEYADWQGKGRTVSPLPFKRIPYRESMLKYGNDKPDLRN 60

Query: 296 PIIMHNVTEH 305
           P+++ +V++ 
Sbjct: 61  PLLITDVSDL 70


>gi|289207651|ref|YP_003459717.1| lysine--tRNA ligase [Thioalkalivibrio sp. K90mix]
 gi|288943282|gb|ADC70981.1| Lysine--tRNA ligase [Thioalkalivibrio sp. K90mix]
          Length = 321

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 5/105 (4%)

Query: 155 RMIAENFIECSTPILTASSPEGARDFLV--PSRVNQGSFYALPQAPQQYKQLLMASGFDR 212
              A N +E  TPIL+  +P      +    +    G+   L  +P+   + L+A G   
Sbjct: 25  FFAARNVLEVETPILSHGAPLD--PMVESWTATSPDGASGYLQTSPEYPMKRLLADGAPD 82

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            +QIA  FR  +    R   EF  L+     ++   +   +  ++
Sbjct: 83  IYQIARVFRGGEAG-PRHNPEFTLLEWYRHGMDHHRLAREVVALI 126



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 14/98 (14%)

Query: 475 LSIKAFQYDLVCNGFEIASGG---------IRNHMSEVMLQAFSNVGISKEVVENRFGGL 525
            +  A ++++     E+A+G                +  L+      + +         L
Sbjct: 225 DARLAARFEVYWGALELANGYHELSDLAQFRERRDRDQALRRQRGQVLPRPDA-----HL 279

Query: 526 YRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
             A   G+P   G+A G+DR++M LLG + + +V  FP
Sbjct: 280 DAALASGLPECAGVALGVDRLLMRLLGVERIEQVIDFP 317


>gi|257077259|ref|ZP_05571620.1| asparagine synthetase A [Ferroplasma acidarmanus fer1]
          Length = 319

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 22/138 (15%)

Query: 434 FCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIAS 493
             W++D P  E    +++                 +   D+  I    ++        + 
Sbjct: 204 PVWVVDIPLKEREFYDREY-----------PEKPGILR-DMDLIWPEGFE-----EASSG 246

Query: 494 GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGA 553
           G     +S+++ +        K   E +F       + G+    G   GI+R    + G 
Sbjct: 247 GEREYELSQILDRIQK-----KGQTEEQFKWFIELAKQGIKYTAGFGIGIERFTRFVCGV 301

Query: 554 KNVREVSLFPMSQNFCDL 571
           + + +V+ FP       L
Sbjct: 302 EKIEDVTTFPKVPGRISL 319



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 70/191 (36%), Gaps = 21/191 (10%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            L    +   I  ++ I + +   +    +IE +  I++  +         P     G  
Sbjct: 21  HLSDKRVQHAIKVQSYIRSYVTDFLREAGYIEIAPIIISPLTDPLNHPVYDPKIHAYGGD 80

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDED---PRSDRLPGEFYQLDMEMSFVEQDD 248
             + Q+   +KQ+       + F ++P  R E     +S R   EF Q+D+E     +++
Sbjct: 81  MWITQSMIFHKQIA-VQELKKIFIMSPNVRLETEEKSKSGRHLYEFTQIDVEALEKSREE 139

Query: 249 ILNTMENVLRGVFEEFSNGNTVS------------NNFLRICYDDAIRRYGTDKP----- 291
           +++  E+++          +                 F  I +++A ++YG         
Sbjct: 140 MMSLAEDMIIYTISRLKKEHKEELEYFHRTLPDYAKPFPVITFEEAEKKYGKGFETPLSK 199

Query: 292 DLRNPIIMHNV 302
           +   P+ + ++
Sbjct: 200 ESSTPVWVVDI 210


>gi|213422970|ref|ZP_03355989.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 58

 Score = 53.9 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVS 271
            F+I   FR+E   S R   EF  +++ M++ +  D++   E++ R + ++      V 
Sbjct: 1   VFEINRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTTQVP 58


>gi|325686252|gb|EGD28295.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 100

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 10/96 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   VR+  W+   R  G I+FL +RD     Q V   +      FE AK +R E 
Sbjct: 10  SAKHVDEEVRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105
              + G +   +             E+    +E++S
Sbjct: 70  SFYLTGTIHEDARSHF-------GYEIQISDLEVVS 98


>gi|48477964|ref|YP_023670.1| asparagine synthetase A [Picrophilus torridus DSM 9790]
 gi|48430612|gb|AAT43477.1| asparaginyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 317

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 76/191 (39%), Gaps = 21/191 (10%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSF 191
            L  + +   I   + I   +   +  + +IE    I++  +         P     G  
Sbjct: 19  HLGDEKVRHAIKVGSDIRGYISEFLRGKGYIEIPPVIISPLTDPLNHPVYDPKISAYGGD 78

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFR---DEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             L ++   +KQ+ + S   + F ++P  R   +E  ++ R   EF Q+D+E     +++
Sbjct: 79  LWLTKSMIFHKQIAVQS-LKKIFIMSPNIRLEVEEKSKTGRHLYEFTQVDIEALEKTREE 137

Query: 249 ILNTMENVLRGVFEEFSNGN------------TVSNNFLRICYDDAIRRYGTDKP----- 291
           +++  E+++    ++    +                 F +I Y +A ++YG D       
Sbjct: 138 MMDLAEDIIIYTIKKIKENDADELKFFKRSLPDFKKPFRKITYMEAEKKYGKDFERELSM 197

Query: 292 DLRNPIIMHNV 302
           + + P+ + ++
Sbjct: 198 ESKEPVWLIDI 208



 Score = 46.6 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 44/139 (31%), Gaps = 22/139 (15%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
           E  W++D P  E  E           F   +   +     D+  I    Y       E +
Sbjct: 201 EPVWLIDIPL-EARE-----------FYDREYDDKPGILRDMDLIWPEGY------QEAS 242

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
           SGG R    E  L         K   E +F       + G+    G   GI+R    + G
Sbjct: 243 SGGER----EYELPRIIERIHKKGQTEEQFKWFIELARHGIKMSAGFGIGIERFTRYVCG 298

Query: 553 AKNVREVSLFPMSQNFCDL 571
            + + + + FP       L
Sbjct: 299 LERIEDTNPFPKVPGKVSL 317


>gi|146189668|emb|CAM92102.1| hypothetical protein [Eristalis tenax]
          Length = 243

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 204 LLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEE 263
           L+++SG    ++I   FR+E       P EF   +  M++ +  D+++  E ++ G+ + 
Sbjct: 11  LVISSGRPGRYEIGRQFRNEGIDLTHNP-EFTTCEFYMAYADYSDLIDMTEKMISGMVKA 69

Query: 264 FSNGNTVSNN 273
                 +  +
Sbjct: 70  IHGSYKIKYH 79


>gi|325686096|gb|EGD28148.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 100

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 10/96 (10%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD---SACFEIAKSVRSEW 69
               V   VR+  W+   R  G I+FL +RD     Q V   +      FE AK +R E 
Sbjct: 10  SSKHVDEEVRMHVWLTDKRSSGKIVFLQLRDGTAFFQGVVRKNDVSEEVFEAAKGLRQEA 69

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105
              + G +   +             E+    +E++S
Sbjct: 70  SFYLTGTIHEDARSHF-------GYEIQISDLEVVS 98


>gi|61676008|gb|AAX51669.1| lysyl tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 223

 Score = 53.9 bits (128), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 35/112 (31%), Gaps = 7/112 (6%)

Query: 442 FYEWNEEEKKIDFAH---NPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRN 498
            +E   E   I   H    P              +       +++    G E ++     
Sbjct: 112 LFEHKVEPHLIQPHHITDFPIETTPLCKPHRDPAEREKGIVERFESFIMGGEFSNAYTEL 171

Query: 499 HMSEVMLQAFSNVGISKEVVENR---FGG-LYRAFQCGMPPHGGIAAGIDRI 546
           +   +  Q  +     K + +     F      A   GMPP GGI  GIDR+
Sbjct: 172 NDPVIQYQLLAEQAARKAIGDEEANPFDHEFVEAICQGMPPTGGIGIGIDRL 223



 Score = 40.8 bits (94), Expect = 0.67,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 34/101 (33%), Gaps = 15/101 (14%)

Query: 230 LPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGN---------------TVSNNF 274
              EF  L+   +  + +D++ TMEN++  +  E                     V   +
Sbjct: 1   HNPEFTLLEAYAAHWDYNDMMRTMENLVEKLALELHGTTLLKVTDPESGKEAEIDVKAPW 60

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFS 315
            R+   ++I  Y     D  +   ++ +     H E +   
Sbjct: 61  KRMTMKESINTYANIDVDALSDEELYKLVLECSHLEAKKIK 101


>gi|238604850|ref|XP_002396310.1| hypothetical protein MPER_03484 [Moniliophthora perniciosa FA553]
 gi|215468612|gb|EEB97240.1| hypothetical protein MPER_03484 [Moniliophthora perniciosa FA553]
          Length = 77

 Score = 53.9 bits (128), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 482 YDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIA 540
           +DL+  G  E+A G +R    +V+ +     G+     E  +       + G  PH G  
Sbjct: 13  FDLLIPGVGELAGGSVREEREDVLHRRMEECGL---DAEGAYKWYLDLRRYGGAPHVGFG 69

Query: 541 AGIDRIV 547
            G +R+V
Sbjct: 70  MGFERLV 76


>gi|218658889|ref|ZP_03514819.1| lysyl-tRNA synthetase protein [Rhizobium etli IE4771]
          Length = 289

 Score = 53.5 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 5/107 (4%)

Query: 155 RMIAENFIECSTPILTASSPEGAR--DFLV--PSRVNQGSFYALPQAPQQYKQLLMASGF 210
               E+FIE  T +L  S    A    F     +   Q + + L  +P+   + L+A+G 
Sbjct: 10  FFAREDFIEVDTAVLQISPGNEAHLHAFATEAVTTDGQRAPFYLHTSPEFACKKLLAAGE 69

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
            R    A  +R+ +      P EF  L+   +    + ++     +L
Sbjct: 70  QRISCFAHVYRNRERGPLHHP-EFTMLEWYRAGESYESLMMDCVRIL 115


>gi|297519657|ref|ZP_06938043.1| lysyl-tRNA synthetase [Escherichia coli OP50]
          Length = 127

 Score = 53.5 bits (127), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 47/141 (33%), Gaps = 20/141 (14%)

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           I   FR+E   S R   EF  +++ M++ +  D++   E++ R + +E      V+    
Sbjct: 1   INRNFRNEGI-SVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVT---- 55

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAI-P 330
                     YG    D   P     + E        ++        +     E   I  
Sbjct: 56  ----------YGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITV 105

Query: 331 AKGGGGNRAFCDRMNEWARSQ 351
            K  G  R   +  +E A + 
Sbjct: 106 EKSWGLGRIVTEIFDEVAEAH 126


>gi|238479943|ref|NP_001154656.1| ATP binding / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleotide
           binding [Arabidopsis thaliana]
 gi|332644140|gb|AEE77661.1| ATP binding / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleotide
           binding protein [Arabidopsis thaliana]
          Length = 166

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              A + G+PP GG   GIDR +MLL  ++N++ V LF
Sbjct: 86  FCMALEYGLPPTGGWGMGIDRPLMLLTDSQNIK-VPLF 122


>gi|296081454|emb|CBI14779.3| unnamed protein product [Vitis vinifera]
          Length = 434

 Score = 53.1 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 47/118 (39%), Gaps = 7/118 (5%)

Query: 70  VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYR 129
            +  +G++     E  +A      IEL A+KI  +   +    P+  +R   +S+R  + 
Sbjct: 6   CILAEGVLKLPPVEGKHA------IELQAEKILHIGTVDREKYPLSKKRLPIDSLR-DFS 58

Query: 130 FLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVN 187
               R  T+   +  R  + ++         F+    PI+T +  EG  +  + + + 
Sbjct: 59  HFKPRTTTVASVMRMRDALTHATHNFFRNNEFLYVQVPIITTTDAEGFSERFIVTTLL 116



 Score = 48.1 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 190 SFYA---LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQ 246
            F++         +      A      +   P FR E   S +   E + +++EM+F + 
Sbjct: 203 DFFSRETYLTVSGRLHLQSYACSLGNVYSFGPRFRAE---SMKHVAEMWMVELEMAFSQL 259

Query: 247 DDILNTMENVLRGVFEEFSNGNTVSNNF 274
           +D +   E+ L+ + +          NF
Sbjct: 260 EDAMTCAEDFLKFLCKSVLENCVGEINF 287


>gi|160690574|gb|ABX46117.1| aspartyl transcarbamylase [Fortunella margarita]
          Length = 217

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +       Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGAXQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|300853862|ref|YP_003778846.1| asparaginyl-tRNA synthetase-like protein [Clostridium ljungdahlii
           DSM 13528]
 gi|300433977|gb|ADK13744.1| asparaginyl-tRNA synthetase related protein [Clostridium
           ljungdahlii DSM 13528]
          Length = 322

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 73/213 (34%), Gaps = 18/213 (8%)

Query: 133 LRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFY 192
           +RR+ L   +  +  I+ ++   M     +     +L   +          +   QG  +
Sbjct: 22  IRREKLPTILGIQQAILRAVDDYMYKNGVVRLLPNMLAPITDPLCHSVEECAITYQGQEF 81

Query: 193 ALPQAPQQYKQLLMAS-GFDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDI 249
            L ++   +KQ+ ++S    + + ++P  R E  +    R   EF Q+D E      + +
Sbjct: 82  NLTKSMIFHKQIALSSPNLQKIYIVSPNVRLELPERGDKRHLFEFTQVDFEFKDGTMNTV 141

Query: 250 LNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHS 309
              ME +++ VF+            L I         GT   ++  P   H   E     
Sbjct: 142 FEFMEGLVKYVFDYIKEECKDKFEKLGI---------GTSHLNITGPFERHTTQELKAKY 192

Query: 310 EFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
               F  I S       W I  K     R F D
Sbjct: 193 GDD-FEAIASQKATQPFWLINHK-----REFYD 219



 Score = 39.3 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 4/110 (3%)

Query: 455 AHNPFTMPQGGMESLKGNDLLSIKAFQ-YDLVCNGFEIASGGIRNHMSEVMLQAFSNVGI 513
           A  PF +     E     DL +   ++ YDL+     +          +   +  + +  
Sbjct: 204 ATQPFWLINHKREFYDAEDLDNRGTYRNYDLIWPMGYVEGLSGGEREYKY-DRIITRMRE 262

Query: 514 SKEVVENRFGGLYRAFQCG-MPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +K   E+         + G +P   G   G++R+   +   K + +V++F
Sbjct: 263 AKMD-ESLLRNYIELAKRGELPKTAGAGFGVERMTRFVCQQKEIDDVTVF 311


>gi|125536383|gb|EAY82871.1| hypothetical protein OsI_38084 [Oryza sativa Indica Group]
          Length = 615

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 39/103 (37%), Gaps = 8/103 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              DL ++ A  +DLV      +A G  +    + +       G+       +       
Sbjct: 519 LKEDLKTVSA--FDLVVPKVGIVACGAQKEERMDNLTSRIEESGLQV----EQLEWYLDT 572

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ-NFCD 570
            + G   H G +  ++ +++ + G K+VR+   F  ++ +   
Sbjct: 573 RRHGTVKHSGFSIDLESLILFVTGLKDVRDAIPFHRTKGHAKC 615



 Score = 49.7 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 5/94 (5%)

Query: 187 NQGSFYALPQAPQ---QYKQLLMASGFDRYFQIAPCFRDEDP--RSDRLPGEFYQLDMEM 241
           +Q  F+  P              A      +  +P F+ E     SDR   E + +D+E+
Sbjct: 342 SQDEFFHRPAYLTPCHTLHLETYACALSSVYTFSPVFQAESESLDSDRSLAERWTVDVEL 401

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +F E +D ++  E+ ++ +    S   +    FL
Sbjct: 402 AFAELEDAISCAEDCVKSLCSTVSKDCSDELKFL 435



 Score = 45.4 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 61/168 (36%), Gaps = 9/168 (5%)

Query: 35  GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI 94
           G   + I D   ++ +    DSA   + +   +   + ++G +     E +   +    +
Sbjct: 129 GTALVRINDGSCVSDLQIVVDSALLPLDQINATGACVLVEGKI-----EQVEGTLPQYVV 183

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRC 154
           ++  +KI  +   +    P          +   Y  L  R  T+      R+ +++++  
Sbjct: 184 QMKVEKILHIGPVDSEKYPR-SNAHSSPDLVRGYPHLAARTATVASTARVRSELVHAVHA 242

Query: 155 RMIAENFIECSTPILTASSPEGARD---FLVPSRVNQGSFYALPQAPQ 199
              +  F   +TP +T ++   A +    L  +R+   S       P+
Sbjct: 243 FFQSNGFFHVNTPTITTTTATSAGNRGKMLRLTRLFSKSDNGNRITPE 290


>gi|115488318|ref|NP_001066646.1| Os12g0414500 [Oryza sativa Japonica Group]
 gi|77555098|gb|ABA97894.1| tRNA synthetases class II family protein, expressed [Oryza sativa
           Japonica Group]
 gi|113649153|dbj|BAF29665.1| Os12g0414500 [Oryza sativa Japonica Group]
 gi|125579118|gb|EAZ20264.1| hypothetical protein OsJ_35868 [Oryza sativa Japonica Group]
          Length = 615

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 39/103 (37%), Gaps = 8/103 (7%)

Query: 470 KGNDLLSIKAFQYDLVCNGF-EIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRA 528
              DL ++ A  +DLV      +A G  +    + +       G+       +       
Sbjct: 519 LKEDLKTVSA--FDLVVPKVGIVACGAQKEERMDNLTSRIEESGLQV----EQLEWYLDT 572

Query: 529 FQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ-NFCD 570
            + G   H G +  ++ +++ + G K+VR+   F  ++ +   
Sbjct: 573 RRHGTVKHSGFSIDLESLILFVTGLKDVRDAIPFHRTKGHAKC 615



 Score = 49.7 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 5/94 (5%)

Query: 187 NQGSFYALPQAPQ---QYKQLLMASGFDRYFQIAPCFRDEDP--RSDRLPGEFYQLDMEM 241
           +Q  F+  P              A      +  +P F+ E     SDR   E + +D+E+
Sbjct: 342 SQDEFFHRPAYLTPCHTLHLETYACALSSVYTFSPVFQAESESLDSDRSLAERWTVDVEL 401

Query: 242 SFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           +F E +D ++  E+ ++ +    S   +    FL
Sbjct: 402 AFAELEDAISCAEDCVKSLCSTVSKDCSDELKFL 435



 Score = 45.1 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 60/168 (35%), Gaps = 9/168 (5%)

Query: 35  GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQI 94
           G   + I D   +  +    DSA   + +   +   + ++G +     E +   +    +
Sbjct: 129 GTALVRINDGSCVADLQIVVDSALLPLDQITATGACVLVEGKI-----EQVEGTLPQYVV 183

Query: 95  ELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRC 154
           ++  +KI  +   +    P          +   Y  L  R  T+      R+ +++++  
Sbjct: 184 QMKVEKILHIGPVDSEKYPR-SNAHSSPDLVRGYPHLAARTATVASTARVRSELVHAVHA 242

Query: 155 RMIAENFIECSTPILTASSPEGARD---FLVPSRVNQGSFYALPQAPQ 199
              +  F   +TP +T ++   A +    L  +R+   S       P+
Sbjct: 243 FFQSNGFFHVNTPTITTTTATSAGNRGKMLRLTRLFSKSDNGNRITPE 290


>gi|160690576|gb|ABX46118.1| aspartyl transcarbamylase [Fortunella margarita]
          Length = 217

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ +R+     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVRERVWTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +       Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGAXQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|118111615|ref|XP_001234617.1| PREDICTED: hypothetical protein, partial [Gallus gallus]
          Length = 96

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 2/98 (2%)

Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNP 296
           +D+EMSFV+Q  I   +E +L+  + E          F  + YD+A+  YGTDKPD R  
Sbjct: 1   IDIEMSFVDQAGIQRLIEGLLQYSWPEERGPIMTP--FPTMTYDEALADYGTDKPDTRFG 58

Query: 297 IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGG 334
           + + ++++     +      +L+   G        +G 
Sbjct: 59  MKIVDISDTLRRLDIGFVQNVLTYPHGTAKAICILQGA 96


>gi|21954446|emb|CAD12671.1| putative asparagine-tRNA ligase [Hortaea werneckii]
          Length = 64

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 186 VNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVE 245
              G    L Q+ Q Y + ++       + I   FR E   + R   E+  ++ E+ F+ 
Sbjct: 2   NYYGEKAYLTQSSQLYLETVLPFA-GNCYCIEKSFRAEKSLTRRHLSEYTHVEAELDFIN 60

Query: 246 QDDI 249
            DD+
Sbjct: 61  FDDL 64


>gi|262401455|gb|ACY66628.1| lysyl-tRNA synthetase-like protein [Scylla paramamosain]
          Length = 209

 Score = 52.4 bits (124), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 17/122 (13%)

Query: 12  LGVSDVGSF-VRLSGWVHRVR-PHGGIIFLDIRDHYGITQVVAN-----PDSACFEIAKS 64
           L     G   V +SG VH +R     + F D+R      QV+AN      ++A +E    
Sbjct: 98  LTQEKEGQEEVTVSGRVHAIRESSQKLRFYDLRGENVKLQVMANLKFYESEAAFYEDCDK 157

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           +R   +L + G+ +            TG++ +   +++I S      LP        +  
Sbjct: 158 IRRGDILGVKGVALRT---------KTGELSIRPTELQI-SAPCLHMLPHLHFGVKDQET 207

Query: 125 RF 126
           R+
Sbjct: 208 RY 209


>gi|77744594|gb|ABB02261.1| asparaginyl-tRNA synthetase [Ovis aries]
          Length = 152

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 484 LVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGI 543
           L+ N  EI  G +R   +E +L  +   GI        +       + G  PHGG   G+
Sbjct: 79  LMPNVGEIVGGSMRIWDNEEILAGYKREGIDPTP----YYWYTDQRKYGTCPHGGYGLGL 134

Query: 544 DRIVMLLLGAKNVRE 558
           +R +  +L   ++R+
Sbjct: 135 ERFLTWILDRYHIRD 149


>gi|68070507|ref|XP_677165.1| asparagine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56497171|emb|CAH96070.1| asparagine--tRNA ligase, putative [Plasmodium berghei]
          Length = 886

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 6/75 (8%)

Query: 167 PILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR 226
           P L  S  EG          N      L Q+PQ YKQ+++   +++ F+I   +R+E   
Sbjct: 346 PELNGS--EGGSSCFTIENENII----LAQSPQFYKQMIINYDYEKIFEINYSYRNEKFH 399

Query: 227 SDRLPGEFYQLDMEM 241
           S +   EF  LD E 
Sbjct: 400 STKHLNEFLSLDTEQ 414



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 41/113 (36%), Gaps = 33/113 (29%)

Query: 479 AFQYDLVCNGFEIASGGIRNH--------------------MSEVMLQAFSNVGISKEVV 518
              +D +  G EI SG  R +                     +E+ + ++  +  +   +
Sbjct: 770 TNSFDFIYKGTEIISGSQRINNLPLLLLRILKGKINNNKNKDTEIDISSYLQINKTNFNL 829

Query: 519 ENRFGG-------------LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE 558
            N F                  +F     PHGG+A G+DR  MLLL   N+++
Sbjct: 830 SNYFDDLQKLINKNSTLYKYINSFAYSSKPHGGMALGLDRFFMLLLNLANIKK 882


>gi|149068950|gb|EDM18502.1| rCG39386 [Rattus norvegicus]
          Length = 110

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 3/79 (3%)

Query: 12  LGVSDV-GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           LGV D  G  V + GW+  VR    ++FL + D   +  +    DS+    ++ +     
Sbjct: 34  LGVQDASGECVTVQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSSF--DSRELAFGSS 91

Query: 71  LCIDGLVMSRSAETINANI 89
           + + G ++   ++  N  +
Sbjct: 92  VQVQGQLVKSQSKRQNVEL 110


>gi|9294235|dbj|BAB02137.1| unnamed protein product [Arabidopsis thaliana]
          Length = 529

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
              A + G+PP GG   GIDR +MLL  ++N++
Sbjct: 474 FCMALEYGLPPTGGWGMGIDRPLMLLTDSQNIK 506


>gi|167626487|ref|YP_001676987.1| tRNA synthetase, class II (D, K and N) [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|167596488|gb|ABZ86486.1| tRNA synthetase, class II (D, K and N) [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 307

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 6/123 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--GSFYALPQA 197
            NI KR + I  +R        +E  TP+  A        F+    +    G  Y L  +
Sbjct: 4   ANIKKRAKYIEKIRTYFKNLEVLEVDTPL--AYEFGVTDPFIDVFNIETVSGKRY-LQSS 60

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+   + L+A+G    +QI   FRDE         EF  ++     V+   ++  +EN+ 
Sbjct: 61  PEYAMKRLLAAGSGSIYQICKAFRDEPCGQL-HKHEFTMIEWYRVGVDYLQLMQEVENLF 119

Query: 258 RGV 260
             +
Sbjct: 120 LAL 122



 Score = 50.5 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 47/106 (44%), Gaps = 5/106 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +T+ Q  +     N    + A ++++  NG E+A+G       +  L+ F++    ++  
Sbjct: 200 YTIHQSALARKIYNQNQQLVAARFEVFSNGIELANGYYELIDKDEQLKRFNSDLEIRKQQ 259

Query: 519 ENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
              +      L    +  +P   G+A G DR++M L     ++++S
Sbjct: 260 NKAYLDIDYKLLNCIEN-IPECSGVALGFDRLLMSLENIDKIQDLS 304


>gi|317497177|ref|ZP_07955503.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895587|gb|EFV17743.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 112

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 23/32 (71%)

Query: 562 FPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           FPMS    DL+ G+PS ++ +QLRE+ +++ +
Sbjct: 81  FPMSGTAQDLMYGAPSEITEQQLREVHIKVRD 112



 Score = 45.4 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPF 442
           +A   R+ +   L ++  N + FC+I DFP 
Sbjct: 53  YAGQIRDELGSRLDLLEKNAYRFCYINDFPM 83


>gi|167767871|ref|ZP_02439924.1| hypothetical protein CLOSS21_02408 [Clostridium sp. SS2/1]
 gi|167710610|gb|EDS21189.1| hypothetical protein CLOSS21_02408 [Clostridium sp. SS2/1]
 gi|291558803|emb|CBL37603.1| Aspartyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 110

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 23/32 (71%)

Query: 562 FPMSQNFCDLLMGSPSTVSVEQLRELGLRIVE 593
           FPMS    DL+ G+PS ++ +QLRE+ +++ +
Sbjct: 79  FPMSGTAQDLMYGAPSEITEQQLREVHIKVRD 110



 Score = 45.4 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 412 FAADARNHIAQELGIINCNCFEFCWIMDFPF 442
           +A   R+ +   L ++  N + FC+I DFP 
Sbjct: 51  YAGQIRDELGSRLDLLEKNAYRFCYINDFPM 81


>gi|224058914|ref|XP_002190814.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 224

 Score = 51.6 bits (122), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 1/50 (2%)

Query: 176 GARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDP 225
           GA++FLVPSR   G FY+LPQ+PQQ+KQLLM  G DR        R  D 
Sbjct: 52  GAKEFLVPSR-EAGKFYSLPQSPQQFKQLLMVGGLDRRLSTEEATRWADS 100


>gi|15221405|ref|NP_177009.1| asparaginyl-tRNA synthetase-related [Arabidopsis thaliana]
 gi|6714349|gb|AAF26040.1|AC015986_3 putative asparaginyl-tRNA synthetase; 13225-12962 [Arabidopsis
           thaliana]
 gi|332196671|gb|AEE34792.1| class II tRNA amino-acyl synthetase-like catalytic core
           domain-containing protein [Arabidopsis thaliana]
          Length = 87

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 29/66 (43%)

Query: 210 FDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNT 269
               +  AP FR E   + R   EF+ +++E++F   ++ +N  E V++ +         
Sbjct: 1   MGDVYTFAPTFRAEKSHTSRHLAEFWMVEVELAFAGVEEAMNCSEAVVKDMCTTLLEKCR 60

Query: 270 VSNNFL 275
               ++
Sbjct: 61  DDMEYM 66


>gi|38048179|gb|AAR09992.1| similar to Drosophila melanogaster Aats-asp [Drosophila yakuba]
          Length = 206

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 7/111 (6%)

Query: 17  VGS-FVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD----SACFEIAKSVRSEWVL 71
           VG   V + G VH  R  G   FL +R      Q +   +        + A ++  E ++
Sbjct: 84  VGKGLVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVNDVISKQMVKFAGNIPKESII 143

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPE 122
            I    ++ S++    +     +ELS ++I ++S A+        +   PE
Sbjct: 144 DIQAKPVAVSSKI--ESCTEQSLELSVEQIFVISQAKAQLPLQIEDASRPE 192


>gi|302556541|ref|ZP_07308883.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302474159|gb|EFL37252.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 292

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 6/121 (4%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQA 197
           +   +V ++ ++ ++R  + AE F E +TP +  +     R   V    + G F      
Sbjct: 1   MLNPVVMKSDLLFTLRDTLRAEAFFEVTTPTMRRADLGPGRRLPVDH--DGGRFLRAMIG 58

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P      +      R F+I  CFR E P     P EF  LD+  +  + D +L   E ++
Sbjct: 59  PAL---RVNLEHHPRVFEIGACFRPEKPDELHAP-EFQMLDLYAAGEDFDFLLALAERLI 114

Query: 258 R 258
           R
Sbjct: 115 R 115


>gi|297519738|ref|ZP_06938124.1| lysyl-tRNA synthetase [Escherichia coli OP50]
          Length = 127

 Score = 51.2 bits (121), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 46/141 (32%), Gaps = 20/141 (14%)

Query: 216 IAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           I   FR+E   S R   EF  +++ M++ +  D++   E++ R + ++      V+    
Sbjct: 1   INRNFRNEGI-SVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVT---- 55

Query: 276 RICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV----HSEFRVFSKILSVNPGYEVWAIPA 331
                     YG    D   P     + E        ++        S     E   I  
Sbjct: 56  ----------YGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHV 105

Query: 332 -KGGGGNRAFCDRMNEWARSQ 351
            K  G  R   +   E A + 
Sbjct: 106 EKSWGLGRIVTEIFEEVAEAH 126


>gi|288818064|ref|YP_003432412.1| lysyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787464|dbj|BAI69211.1| lysyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 293

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 5/84 (5%)

Query: 474 LLSIKAFQYDLVCNGFEIASG-GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +    A +++L   G EIA+G       SE+  +    +      ++      Y  F   
Sbjct: 207 VKDGYAERFELYIKGVEIANGWTEETSKSEIERRMKLYLQGRDLPIDEELIKAYENF--- 263

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNV 556
            PP  G + G++R+ M+L+G  ++
Sbjct: 264 -PPCAGCSIGLERLFMVLMGLNSI 286



 Score = 43.9 bits (102), Expect = 0.086,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 40/120 (33%), Gaps = 5/120 (4%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA---LPQAPQQ 200
            +  ++ +R       + E  T IL    + +   +                 L  +P+ 
Sbjct: 6   WSEFLDKVRSFFKRRGYFEVDTSILQPYPNIDPHVEPFSIDTEGLADCPKRLWLRTSPEN 65

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
             + L++      FQI   FR +       P EF  L+      +   ++  +E  L+ +
Sbjct: 66  SMKKLLSKYQMDIFQIGKVFRKDPCGRLHRP-EFTMLEWYKVGQDYKYLMKEIEEFLKYL 124


>gi|308751665|gb|ADO45148.1| Lysine--tRNA ligase [Hydrogenobacter thermophilus TK-6]
          Length = 299

 Score = 50.8 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 5/84 (5%)

Query: 474 LLSIKAFQYDLVCNGFEIASG-GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG 532
           +    A +++L   G EIA+G       SE+  +    +      ++      Y  F   
Sbjct: 213 VKDGYAERFELYIKGVEIANGWTEETSKSEIERRMKLYLQGRDLPIDEELIKAYENF--- 269

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNV 556
            PP  G + G++R+ M+L+G  ++
Sbjct: 270 -PPCAGCSIGLERLFMVLMGLNSI 292



 Score = 43.9 bits (102), Expect = 0.089,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 40/120 (33%), Gaps = 5/120 (4%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQGSFYA---LPQAPQQ 200
            +  ++ +R       + E  T IL    + +   +                 L  +P+ 
Sbjct: 12  WSEFLDKVRSFFKRRGYFEVDTSILQPYPNIDPHVEPFSIDTEGLADCPKRLWLRTSPEN 71

Query: 201 YKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260
             + L++      FQI   FR +       P EF  L+      +   ++  +E  L+ +
Sbjct: 72  SMKKLLSKYQMDIFQIGKVFRKDPCGRLHRP-EFTMLEWYKVGQDYKYLMKEIEEFLKYL 130


>gi|169838303|ref|ZP_02871491.1| hypothetical protein cdivTM_14586 [candidate division TM7
           single-cell isolate TM7a]
          Length = 52

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 24/38 (63%)

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            Y   + GMPP GG+  GIDR++++L  + ++ EV  F
Sbjct: 5   FYHTLRVGMPPAGGVGFGIDRLLIILTDSSDIIEVIPF 42


>gi|309800495|ref|ZP_07694648.1| lysyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308115875|gb|EFO53398.1| lysyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 111

 Score = 50.8 bits (120), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 10  GDLGVS---DVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            DL      ++     ++G +   R  G + F  ++D  G  Q+    D+   E  KS++
Sbjct: 49  ADLDKEQLHELNETATIAGRLVTKRGKGKVGFAHLQDREGQIQIYVRKDAVGEETTKSLK 108


>gi|241668923|ref|ZP_04756501.1| tRNA synthetase, class II (D, K and N) [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254877455|ref|ZP_05250165.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254843476|gb|EET21890.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 307

 Score = 50.5 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 46/106 (43%), Gaps = 5/106 (4%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVV 518
           +T+ Q  +     N    + A ++++  NG E+A+G       +  L+ F+     ++  
Sbjct: 200 YTIHQSALARKIYNQNQQLVAARFEVFSNGIELANGYYELIDKDEQLKRFNTDLEIRKQQ 259

Query: 519 ENRFGG----LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVS 560
              +      L    +  +P   G+A G DR++M L     ++++S
Sbjct: 260 NKAYLDIDYKLLNCIEN-IPECSGVALGFDRLLMSLENIDKIQDLS 304



 Score = 49.7 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 6/123 (4%)

Query: 140 KNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ--GSFYALPQA 197
            NI KR + +  +R        +E  TP+  A        F+    +    G  Y L  +
Sbjct: 4   ANIKKRAKYLEKIRTYFKNLEVLEVDTPL--AYEFGVTDPFIDVFNIETVSGKRY-LQSS 60

Query: 198 PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           P+   + L+A+G    +QI   FRDE         EF  ++     V+   ++  +EN+ 
Sbjct: 61  PEYAMKRLLAAGSGSIYQICKAFRDEPCGQL-HKHEFTMIEWYRVGVDYLQLMQELENLF 119

Query: 258 RGV 260
             +
Sbjct: 120 LAL 122


>gi|294494967|ref|YP_003541460.1| Pyrrolysyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292665966|gb|ADE35815.1| Pyrrolysyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 404

 Score = 50.5 bits (119), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 71/177 (40%), Gaps = 23/177 (12%)

Query: 102 EILSVAEE----LPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMI 157
            +LS A++      LP F E E     + K    DLR+        +  ++   +   +I
Sbjct: 148 TLLSPADDLSSIKELPTFKELETELVKKRKQ---DLRQMYEDDRRHQLAQLERDISLFLI 204

Query: 158 AENFIECSTPILTAS-------SPEGARDFLVPSRVNQGSFYALPQAPQQYKQL-----L 205
            + F+E  T +L  +         E    +    RV++ +      AP  Y  L     +
Sbjct: 205 EKGFMEVRTSVLIPAKFIERMGITEEDPLYKQIFRVDENTCLRPMLAPGLYNYLHNFDNI 264

Query: 206 MASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM--EMSFVEQDDILNTMENVLRGV 260
           M     + F+I  C+R ++        EF  ++     S   ++++LN ++++L+ +
Sbjct: 265 MPDPL-KIFEIGTCYR-KESDGKEHLEEFTMVNFCQMGSGCTKENLLNIIDDLLKYL 319


>gi|163782538|ref|ZP_02177535.1| lysyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882111|gb|EDP75618.1| lysyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 296

 Score = 50.5 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 6/119 (5%)

Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
           + E E+++ F    F        S     +    A +++L   G EIA+G       E +
Sbjct: 178 FIEVERRLGFDKPTFLKDFPERLSALAR-VEGGLANRFELFIKGIEIANGWTEETDPEEV 236

Query: 505 LQAFS-NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
            +            ++  F     A    +PP  G + G++R+ ML +G + + ++ LF
Sbjct: 237 RRRMKTEAEKRNLPIDEEFI----AAHHKIPPCAGCSIGVNRLFMLWVGKETLNDIELF 291



 Score = 47.4 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 21/161 (13%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTA-----SSPEGARDFLVPSRVNQGSFYALPQAP 198
           K    IN +R       ++E STP+L       S+ E     +   R  +     L  +P
Sbjct: 5   KWDTFINELRTFFRGRGYLEVSTPVLLKFPNLDSNVEPI--PVEVKRRGRKETLWLQTSP 62

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + ++A      FQIA  FR+++        EF+ L+      +   ++  ++ +LR
Sbjct: 63  EYSMKKILAEYKRHIFQIAKVFRNDEHGRLHRL-EFHMLEWYRIGADYRYLIEEIKELLR 121

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRY-----GTDKPDLR 294
            +F            F  I   +A  ++     G D+ DL+
Sbjct: 122 ELF--------GYEEFEEISVSEAFEKHLGIELGEDEKDLK 154


>gi|255514203|gb|EET90465.1| tRNA synthetase class II (D K and N) [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 305

 Score = 50.1 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 16/172 (9%)

Query: 146 TRIINSMRCRMIAENFIECSTPILTASS----PEGARDFLVPSRVNQGSFYALPQAPQQY 201
           + II           F++    +L  S+    P+     +    +  G            
Sbjct: 16  SAIIRFAVDYFHDSGFVQLLPVVLGKSTDPLGPDPGSSIVKTPEIEYGGERLYTMNSMIL 75

Query: 202 KQLLMASGFDRYFQIAPCFRDEDP---RSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
            + +     ++ F ++P  R E P    + R   EF QLD E+   + DD++  +E  L 
Sbjct: 76  HKQIAVKDLEKIFILSPNIRLERPERGSTRRHLFEFTQLDFEIKDAKMDDVIRVVEGFLG 135

Query: 259 GVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSE 310
            +       +  +  F            G +  + R P   +   E      
Sbjct: 136 KLGAAIKADSRAAGVF---------SGLGVEPFEFRPPFKRYTTHELEAKYG 178



 Score = 43.5 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 8/96 (8%)

Query: 470 KGNDLLSIKAFQYDLVCN---GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
           + +D        YDL+     G  ++ G        +M +   +           +    
Sbjct: 205 REDDSEPGHYLNYDLIYPKGYGEALSGGEREYEYGRIMKRMSRDKLELGI-----YDAYI 259

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
              + G  P  G   GI+R+   +  A +V +V +F
Sbjct: 260 EQLKKGFVPSAGAGFGIERLTRFMTAADHVGDVQVF 295


>gi|9294240|dbj|BAB02142.1| unnamed protein product [Arabidopsis thaliana]
          Length = 61

 Score = 50.1 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 23/61 (37%)

Query: 168 ILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRS 227
           ++   +             +      +  AP+ Y + L+  GFDR ++I   FR+E    
Sbjct: 1   MMNMIAGGAVERPFATYHNDMKIKMFMRIAPELYLKELVVGGFDRVYEIGKQFRNEGIDM 60

Query: 228 D 228
            
Sbjct: 61  T 61


>gi|225850647|ref|YP_002730881.1| lysyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225646712|gb|ACO04898.1| lysine--tRNA ligase [Persephonella marina EX-H1]
          Length = 309

 Score = 50.1 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 69/198 (34%), Gaps = 25/198 (12%)

Query: 146 TRIINSMRCRMIAENFIECST------PILTASSPEGARDFLVPSRVNQG-SFYALPQAP 198
           ++I+  +R        IE  T      P L A          +    N+G     L  +P
Sbjct: 7   SKILKGIRDYFERTGAIEVFTDILRLYPNLDAHI----LPVELFFNDNEGRKRGFLHTSP 62

Query: 199 QQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLR 258
           +   + +++      +QI   FR+ +  S +   EF  L+        DDI++  +N+  
Sbjct: 63  EYEMKRILSEIKRDIYQITKVFRNFES-SKKHKIEFTMLEWYRVGYNLDDIMDDTQNIFI 121

Query: 259 G----VFEEFSNGNTVSNNFLR----ICYDDAIRRYGTDKPD-----LRNPIIMHNVTEH 305
                ++++           LR    I  D+A  R+ +  PD     +R      ++ E 
Sbjct: 122 ESAISLYKKPVVTYMGKRYDLRESEKITVDEAFYRFTSVYPDRYEDMIRFLKEKEDIKEE 181

Query: 306 FVHSEFRVFSKILSVNPG 323
             + E         V P 
Sbjct: 182 IDYEEAFFRIYAFYVEPN 199



 Score = 42.4 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 11/89 (12%)

Query: 478 KAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEV-------VENRFGGLYRAFQ 530
           +  +++   NG E+ +G       E +        + K+        V+ RF  +     
Sbjct: 225 RGKRFEAYINGLELVNGYHELTDPEKVKNILEREALRKKEETGKDYPVDYRFIEITEDL- 283

Query: 531 CGMPPHGGIAAGIDRIVMLLLGAKNVREV 559
              P   G + GIDR+ M+LL   N++++
Sbjct: 284 ---PDCSGASLGIDRLFMVLLNKSNIKDI 309


>gi|118120154|ref|XP_001232509.1| PREDICTED: hypothetical protein, partial [Gallus gallus]
          Length = 32

 Score = 50.1 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHR 29
          RT++CG+L  + VG  V L GW+  
Sbjct: 7  RTNTCGELRAAHVGQEVTLCGWIQY 31


>gi|242223152|ref|XP_002477243.1| predicted protein [Postia placenta Mad-698-R]
 gi|220723340|gb|EED77558.1| predicted protein [Postia placenta Mad-698-R]
          Length = 182

 Score = 49.7 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 35/106 (33%), Gaps = 9/106 (8%)

Query: 3   RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA-----NPDS 56
           R RT     L     G  V L   V   R  G  ++F  +R      Q +          
Sbjct: 78  RSRT-QIASLTPELDGQPVLLRARVQTSRMQGSKMVFFVLRQRIDSVQALLTVSEGKVSK 136

Query: 57  ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIE 102
              + A  +  E ++ ++G V        +A +  G +E+   +  
Sbjct: 137 QMAKWAGGLAMESIVLVEGTVKKAPEIIKSATV--GNVEIHISQWT 180


>gi|218461425|ref|ZP_03501516.1| lysyl-tRNA synthetase protein [Rhizobium etli Kim 5]
          Length = 264

 Score = 49.7 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 5/89 (5%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENR----FGGLYRAFQCGMP 534
           A +++L   G E+A+G      +    + F      K  V          L  A    MP
Sbjct: 171 AERFELYACGVELANGFGELTNAAEQKRRFEIEMAEKMRVYGENYPIDEDLLAALS-SMP 229

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFP 563
              GIA G DR+VML  GA  + +V   P
Sbjct: 230 EASGIALGFDRLVMLATGASRIDQVLWAP 258



 Score = 37.7 bits (86), Expect = 6.6,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 205 LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVL 257
           ++A+G  R    A  +R+ +      P EF  L+   +    + ++     +L
Sbjct: 1   MLAAGEQRISCFAHVYRNRERGPLHHP-EFTMLEWYRAGESYESMMMDCVRIL 52


>gi|134077579|emb|CAK96723.1| unnamed protein product [Aspergillus niger]
          Length = 198

 Score = 49.7 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 32/129 (24%), Gaps = 21/129 (16%)

Query: 104 LSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE---N 160
           L  A+   +P+   +   + +      L  R          R+ + +++           
Sbjct: 74  LGTADSDTIPLSQRQPSSKVLHH-NPHLRTRTPQSAILARFRSTVASALSNLFDKHSDGP 132

Query: 161 FIECSTPILTASSPEGARDFL--------------VPSRVNQGSFYALPQAPQQYKQLLM 206
           F     P+LT +  EG                     +      F         +     
Sbjct: 133 FYHVHLPMLTWTDCEGGAKMFAAPTQRSNLVDKKMTDTYFG---FRKWLNVSGVFHAEGF 189

Query: 207 ASGFDRYFQ 215
             G DR + 
Sbjct: 190 VQGLDRSWT 198


>gi|160690552|gb|ABX46106.1| aspartyl transcarbamylase [Citrus maxima]
          Length = 217

 Score = 49.3 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ + +     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVXEXVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPNVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|255571572|ref|XP_002526732.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223533921|gb|EEF35646.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 78

 Score = 49.3 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/43 (55%), Positives = 29/43 (67%), Gaps = 1/43 (2%)

Query: 197 APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
            P +  Q LM SGFD+Y+QIA CFRD+D R+D  P E   LDM
Sbjct: 29  YPGEGVQTLMVSGFDKYYQIARCFRDQDLRADTQP-ELTWLDM 70


>gi|160690550|gb|ABX46105.1| aspartyl transcarbamylase [Citrus maxima]
          Length = 217

 Score = 49.3 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ + +     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVXEXVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q+E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQVEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|71406177|ref|XP_805647.1| aspartyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70869137|gb|EAN83796.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 129

 Score = 48.9 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVA 52
           L    VG  V +   V   R  G + F+ +RD     Q +A
Sbjct: 86  LTKEHVGKTVTVRARVDTTRKKGKLAFMVLRDGTDSIQAMA 126


>gi|313635103|gb|EFS01446.1| lysyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 113

 Score = 48.9 bits (115), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 22/57 (38%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           + +    V ++G +   R  G + F  I+D +   Q+    D+   +     +   +
Sbjct: 56  LEEASIEVTVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKIADL 112


>gi|302769270|ref|XP_002968054.1| hypothetical protein SELMODRAFT_409103 [Selaginella moellendorffii]
 gi|300163698|gb|EFJ30308.1| hypothetical protein SELMODRAFT_409103 [Selaginella moellendorffii]
          Length = 106

 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 36/118 (30%), Gaps = 20/118 (16%)

Query: 413 AADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGN 472
             D      + LG++    ++     DF          +   A  PF             
Sbjct: 9   LGDLDTETERRLGLLVKERYK----TDFYILH------RYPLAVRPFYTMPAVD------ 52

Query: 473 DLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQ 530
           D     +  +D+   G EI SG  R H  +++L+      I    +         +F+
Sbjct: 53  DPK--YSNSFDVFIRGEEIISGAQRVHDKDLLLKRIEECNIDPNAI--GLQNYINSFR 106


>gi|188996701|ref|YP_001930952.1| tRNA synthetase class II (D K and N) [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931768|gb|ACD66398.1| tRNA synthetase class II (D K and N) [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 312

 Score = 48.5 bits (114), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 63/170 (37%), Gaps = 19/170 (11%)

Query: 138 LHKNIVKRTRIINSMRCRMIAENFIECSTPIL-------TASSPEGARDFLVPSRVNQGS 190
           + K    ++ II S+R        IE  T IL           P    +  V    +Q  
Sbjct: 1   MKKIYSDKSTIIKSIREYFYRTGSIEVFTDILRDFSNLDNNIYPV---ELFVYDERSQPI 57

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
              L  +P+   + +++      FQI   FR+ +  S +   EF  L+      + DD++
Sbjct: 58  RKFLHTSPEPSMKKILSEIKTDIFQITKVFRNYE-GSCKHKIEFTMLEWYRVGYDLDDLM 116

Query: 251 NTMENVLRG----VFE----EFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
              +N+       +++    ++        ++ +I  D+A   Y    P+
Sbjct: 117 EDTQNIFIESAISLYKKPKIKYKGREYNLLDWQKITVDEAFYIYTGIYPE 166



 Score = 45.1 bits (105), Expect = 0.039,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 34/85 (40%), Gaps = 2/85 (2%)

Query: 474 LLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG- 532
           +   K  +++   NG E+ +G    +    +          K+     +       +   
Sbjct: 225 VKDGKGKRFEAYINGIELVNGYHELNDPVELESRLKQDIEKKKKEGFDYPLDTEFIKASQ 284

Query: 533 -MPPHGGIAAGIDRIVMLLLGAKNV 556
            +P   G + GIDR++M+LL  +++
Sbjct: 285 NLPECSGASLGIDRLIMILLDLESI 309


>gi|315301147|ref|ZP_07872423.1| lysyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313630484|gb|EFR98341.1| lysyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 113

 Score = 47.8 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 22/57 (38%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           + +    V ++G +   R  G + F  I+D +   Q+    D+   +     +   +
Sbjct: 56  LEEASIEVTVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDSYVVFKMADL 112


>gi|229515673|ref|ZP_04405132.1| asparaginyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229347442|gb|EEO12402.1| asparaginyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 78

 Score = 47.8 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 6/64 (9%)

Query: 17 VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVL 71
          V S V + GW+   R    GI FL I D      + A    N ++   E+ K      V 
Sbjct: 16 VDSEVTVRGWIRTRRDSKAGISFLAIYDGSCFNPIQAVVPNNLNNYDNEVLKLTTGCSV- 74

Query: 72 CIDG 75
           + G
Sbjct: 75 EVTG 78


>gi|19913912|gb|AAM03608.1| predicted protein [Methanosarcina acetivorans C2A]
          Length = 404

 Score = 47.4 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 22/179 (12%)

Query: 103 ILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFI 162
           +LS  +E+ L         ES     R  DL+R    +      ++   +    +   F+
Sbjct: 151 LLSPKDEISLDSEKPFRELESELLSRRKKDLKRIYAEERENYLGKLEREITKFFVDRGFL 210

Query: 163 ECSTPILTA----------SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL-----LMA 207
           E  +PIL            S  E ++      R+++        AP  Y  L      + 
Sbjct: 211 EIKSPILIPAEYVERMGINSDTELSKQVF---RIDKNFCLRPMLAPNLYNYLRKLDRALP 267

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM--EMSFVEQDDILNTMENVLRGVFEEF 264
               + F+I PC+R ++        EF  L+     S   ++++   +   L  +  +F
Sbjct: 268 DPI-KIFEIGPCYR-KESDGKEHLEEFTMLNFCQMGSGCTRENLEAIITEFLNHLGIDF 324


>gi|160690500|gb|ABX46080.1| aspartyl transcarbamylase [Citrus aurantiifolia]
          Length = 217

 Score = 47.4 bits (111), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ + +     Q      PDS   E+ + V
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVXEXVSTVQCLATVKPDSVSKEMVRFV 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVVSVPDVEIKGATQQGEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|37498984|gb|AAQ91582.1| aspartyl-tRNA synthetase [Helicobacter mustelae]
          Length = 29

 Score = 47.4 bits (111), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/29 (51%), Positives = 21/29 (72%)

Query: 18 GSFVRLSGWVHRVRPHGGIIFLDIRDHYG 46
          G  VRL+GW +  R HGG++F+D+RD  G
Sbjct: 1  GEEVRLAGWCNTYRDHGGVVFIDLRDKSG 29


>gi|161484944|ref|NP_615128.2| pyrolysyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|118573258|sp|Q8TUB8|PYLS_METAC RecName: Full=Pyrrolysyl-tRNA synthetase; AltName:
           Full=Pyrrolysine--tRNA ligase; Short=PylRS
          Length = 443

 Score = 47.0 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 22/179 (12%)

Query: 103 ILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFI 162
           +LS  +E+ L         ES     R  DL+R    +      ++   +    +   F+
Sbjct: 190 LLSPKDEISLDSEKPFRELESELLSRRKKDLKRIYAEERENYLGKLEREITKFFVDRGFL 249

Query: 163 ECSTPILTA----------SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL-----LMA 207
           E  +PIL            S  E ++      R+++        AP  Y  L      + 
Sbjct: 250 EIKSPILIPAEYVERMGINSDTELSKQVF---RIDKNFCLRPMLAPNLYNYLRKLDRALP 306

Query: 208 SGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM--EMSFVEQDDILNTMENVLRGVFEEF 264
               + F+I PC+R ++        EF  L+     S   ++++   +   L  +  +F
Sbjct: 307 DPI-KIFEIGPCYR-KESDGKEHLEEFTMLNFCQMGSGCTRENLEAIITEFLNHLGIDF 363


>gi|238578770|ref|XP_002388830.1| hypothetical protein MPER_12111 [Moniliophthora perniciosa FA553]
 gi|215450473|gb|EEB89760.1| hypothetical protein MPER_12111 [Moniliophthora perniciosa FA553]
          Length = 221

 Score = 46.6 bits (109), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 8/93 (8%)

Query: 18  GSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA-----NPDSACFEIAKSVRSEWVL 71
           G  V     VH  R  G  ++FL++R      Q +             + A S+  E ++
Sbjct: 91  GETVLFRARVHTSRAQGNKMVFLNLRQRTDSVQALLFVTPEKVSKQMVKWAASLADESIV 150

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEIL 104
            ++G+V        +A++    +E+   ++ I+
Sbjct: 151 LVEGIVKKTPEPIKSASVE--DVEVHISQVGII 181


>gi|125624256|ref|YP_001032739.1| hypothetical protein llmg_1448 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124493064|emb|CAL98028.1| putative membrane protein [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071037|gb|ADJ60437.1| hypothetical protein LLNZ_07465 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 917

 Score = 46.6 bits (109), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 29/91 (31%), Gaps = 3/91 (3%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
               + G +   R  G I F D+ D+    Q+V   D          R E        V 
Sbjct: 687 EEHSIQGRLVSSRGRGAIFFADLSDNQSKIQLVIKRDVINEYSESENRLENFATWKKDVT 746

Query: 79  SRSA---ETINANIITGQIELSAQKIEILSV 106
                  + +     TG++ L     ++LS 
Sbjct: 747 VGDRVLVKGVLMRTQTGELSLRVNSWKMLSK 777


>gi|67969058|dbj|BAE00884.1| unnamed protein product [Macaca fascicularis]
          Length = 223

 Score = 46.6 bits (109), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 18  GSFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQVVANPDSAC 58
           G  V++ GWVHR+R  G  ++FL +RD  G  Q V   D   
Sbjct: 135 GQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLADDLLN 176


>gi|116335020|ref|YP_802515.1| lysyl-tRNA synthetase [Candidatus Carsonella ruddii PV]
 gi|116235301|dbj|BAF35149.1| lysyl-tRNA synthetase [Candidatus Carsonella ruddii PV]
          Length = 381

 Score = 46.2 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 38/81 (46%), Gaps = 1/81 (1%)

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDME 240
                  +  F+ L  +P+   + +++  ++  ++++ CFR+E   S+    EF  L+  
Sbjct: 123 FKTFNFYKKKFFYLKISPELSIKKILSCNYNNIYELSNCFRNEGV-SNIHNFEFLMLEYY 181

Query: 241 MSFVEQDDILNTMENVLRGVF 261
            S     + ++ +E  ++ +F
Sbjct: 182 SSNFSFRNSISFLELFIKNIF 202



 Score = 42.4 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 10/79 (12%)

Query: 479 AFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGG 538
           A +++L  +  EI++G    +   +    F+                    + G+    G
Sbjct: 310 AKRFELYISSIEISNGFNELNDYFLQKINFNKKNKD----------FLSYIKKGLQNFNG 359

Query: 539 IAAGIDRIVMLLLGAKNVR 557
           +  GI+R++ML+   KN++
Sbjct: 360 VGIGINRLLMLMYKIKNIK 378


>gi|167947572|ref|ZP_02534646.1| fold recognizing lysyl-tRNA [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 96

 Score = 46.2 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+A+G    ++I   FRD +    R   EF  L+      +   ++  +  ++  + 
Sbjct: 1   MKRLLAAGSGPIYEICKVFRDGELG-RRHNPEFTLLEWYRPGFDHRQLMGEVAELVNRLL 59

Query: 262 EE 263
            E
Sbjct: 60  PE 61


>gi|147867073|emb|CAN82652.1| hypothetical protein VITISV_000561 [Vitis vinifera]
          Length = 572

 Score = 46.2 bits (108), Expect = 0.016,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 24/55 (43%)

Query: 221 RDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFL 275
           R     + R   EF+ ++ E++F +  D +N  E  ++ + +   +       F+
Sbjct: 337 RGTHSHTSRHLAEFWMVEPEIAFADLKDDMNCAEAYVKFLCQWLPDNCIDDMEFM 391


>gi|297846508|ref|XP_002891135.1| hypothetical protein ARALYDRAFT_891103 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336977|gb|EFH67394.1| hypothetical protein ARALYDRAFT_891103 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 166

 Score = 46.2 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 150 NSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
             +R  +++++F+   TP L A S EG           QG    L Q+PQ +KQ+ +   
Sbjct: 52  QCVRENLLSKDFVNIHTPKLLAGSSEGGSAVFRLEY--QGQPACLAQSPQLHKQMTICDL 109

Query: 210 F 210
            
Sbjct: 110 L 110


>gi|281491613|ref|YP_003353593.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281375331|gb|ADA64844.1| Lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 921

 Score = 46.2 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 6/122 (4%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSEWVLCIDGL 76
               + G +  +R  G + F D+ D+    Q+V   D+     E+   + +  +   D  
Sbjct: 691 KEYSIHGKLISLRGRGAMQFADLADNQAKIQLVIKRDTLNEYAELENRLENFAIWKKDVT 750

Query: 77  VMSRS-AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL-DLR 134
           V  R   +       TG++ L     ++LS        +            +  +L  +R
Sbjct: 751 VGDRVLVKGTLMRTQTGELSLRVNSWKMLSKTLRELTDIEKIDHT--KFIERTEYLSRIR 808

Query: 135 RD 136
           RD
Sbjct: 809 RD 810


>gi|255025021|ref|ZP_05297007.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 114

 Score = 46.2 bits (108), Expect = 0.017,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 22/57 (38%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           + +    V ++G +   R  G + F  I+D +   Q+    D+   +     +   +
Sbjct: 56  LEEDAIEVSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGEDAYAVFKLADL 112


>gi|160690498|gb|ABX46079.1| aspartyl transcarbamylase [Citrus aurantiifolia]
          Length = 217

 Score = 46.2 bits (108), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 3/119 (2%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQV--VANPDSACFEIAKSV 65
            G L  S     V + G VH  RP G  + F+ + +     Q      PDS   E+ +  
Sbjct: 94  VGALNGSLKDQEVLIRGRVHTTRPVGNKLAFVVVXEXVSTVQCLATVKPDSVSKEMVRFA 153

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
           RS     I  ++   S   +     T Q E+  +K+  +S A + P+ +         I
Sbjct: 154 RSLSNESIVDVIGVISVPDVEIKGATQQGEVQIKKLYCVSRAAKTPITIEDASRSEAEI 212


>gi|21227547|ref|NP_633469.1| pyrolysyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|74550423|sp|Q8PWY1|PYLS_METMA RecName: Full=Pyrrolysyl-tRNA synthetase; AltName:
           Full=Pyrrolysine--tRNA ligase; Short=PylRS
 gi|20905927|gb|AAM31141.1| hypothetical protein MM_1445 [Methanosarcina mazei Go1]
          Length = 454

 Score = 45.8 bits (107), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 50/136 (36%), Gaps = 22/136 (16%)

Query: 147 RIINSMRCRMIAENFIECSTPILTA----------SSPEGARDFLVPSRVNQGSFYALPQ 196
           ++   +    +   F+E  +PIL            +  E ++      RV++        
Sbjct: 245 KLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIF---RVDKNFCLRPML 301

Query: 197 APQQYKQL-----LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM--EMSFVEQDDI 249
           AP  Y  L      +     + F+I PC+R ++        EF  L+     S   ++++
Sbjct: 302 APNLYNYLRKLDRALPDPI-KIFEIGPCYR-KESDGKEHLEEFTMLNFCQMGSGCTRENL 359

Query: 250 LNTMENVLRGVFEEFS 265
            + + + L  +  +F 
Sbjct: 360 ESIITDFLNHLGIDFK 375


>gi|212695606|ref|ZP_03303734.1| hypothetical protein ANHYDRO_00123 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677484|gb|EEB37091.1| hypothetical protein ANHYDRO_00123 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 131

 Score = 45.8 bits (107), Expect = 0.024,   Method: Composition-based stats.
 Identities = 12/25 (48%), Positives = 19/25 (76%)

Query: 542 GIDRIVMLLLGAKNVREVSLFPMSQ 566
           GIDR++M+L G  ++R+V LFP  +
Sbjct: 1   GIDRLIMILTGQHSIRDVLLFPTMK 25


>gi|149924359|ref|ZP_01912726.1| tRNA synthetase, class II (D, K and N) [Plesiocystis pacifica
           SIR-1]
 gi|149814747|gb|EDM74319.1| tRNA synthetase, class II (D, K and N) [Plesiocystis pacifica
           SIR-1]
          Length = 251

 Score = 45.4 bits (106), Expect = 0.026,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 7/135 (5%)

Query: 132 DLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGA-RDFLVPSRVNQGS 190
           DL        +      + ++R  +      E STPI     PE A   ++ P    +G 
Sbjct: 7   DLPSLPWAVRVELWDAALEAVRTTLRGGGMREVSTPI---RGPEVAIEPWIEPIVAGRGR 63

Query: 191 FYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDIL 250
           + A   +P+   + L+A G    FQIA  FR  +  +     EF+ ++   S  +  D+ 
Sbjct: 64  YLA--TSPELAMKGLLARGAPSMFQIAHVFRAAEIGAQ-HSEEFHLIEWYRSPGQLPDVQ 120

Query: 251 NTMENVLRGVFEEFS 265
             +E V+  VF   +
Sbjct: 121 GDVEAVIEAVFAAVA 135


>gi|326406666|gb|ADZ63737.1| lysyl-tRNA synthetase 2 [Lactococcus lactis subsp. lactis CV56]
          Length = 921

 Score = 45.4 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 6/129 (4%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
               + G +  +R  G + F D+ D+    Q+V   D+         R E        V 
Sbjct: 691 KEYSIHGKLISLRGRGAMQFADLADNQAKIQLVIKRDTLNEYAELENRLENFAIWKKDVT 750

Query: 79  SRSAETINANII---TGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL-DLR 134
                 +  N++   TG++ L     ++LS        +            +  +L  +R
Sbjct: 751 IGDRVLVKGNLMRTQTGELSLRVNSWKMLSKTLRELTDIEKIDHT--KFIERTEYLSRIR 808

Query: 135 RDTLHKNIV 143
           RD L    V
Sbjct: 809 RDLLSNRFV 817


>gi|163752100|ref|ZP_02159306.1| asparaginyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161327992|gb|EDP99166.1| asparaginyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 75

 Score = 45.4 bits (106), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 5/60 (8%)

Query: 17 VGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVA----NPDSACFEIAKSVRSEWVL 71
          +GS + + GWV   R    GI FL + D      +      + ++   EI K      V+
Sbjct: 16 IGSQITIRGWVRSRRDSKAGISFLAVYDGSCFDPIQGVVPNSLENYNNEILKLTTGCSVI 75


>gi|116753971|ref|YP_843089.1| DNA polymerase II small subunit [Methanosaeta thermophila PT]
 gi|116665422|gb|ABK14449.1| DNA polymerase II small subunit [Methanosaeta thermophila PT]
          Length = 487

 Score = 45.4 bits (106), Expect = 0.030,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 32/81 (39%)

Query: 2   HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEI 61
            R  +     LG    G  V + G V  +R       +++ D  G+  V+   DS  +E 
Sbjct: 128 KRMSSRPIESLGAQTTGREVSVIGMVMAIRNTSRARVVELEDPTGMVTVLFARDSPAYED 187

Query: 62  AKSVRSEWVLCIDGLVMSRSA 82
           +  + ++ V+ I G    R  
Sbjct: 188 SMLLVTDEVVGITGTSDGRGR 208


>gi|297827925|ref|XP_002881845.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297847294|ref|XP_002891528.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297327684|gb|EFH58104.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337370|gb|EFH67787.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 106

 Score = 45.4 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 152 MRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASG 209
            R  +++++F+   TP L A S EG           QG    L Q+PQ +KQ+ + +G
Sbjct: 2   FRENLLSKDFVNIHTPKLLAGSSEGGSAVFRLEY--QGQPACLAQSPQLHKQMTIYNG 57


>gi|21322023|gb|AAL40867.1| PylS [Methanosarcina barkeri]
          Length = 419

 Score = 45.4 bits (106), Expect = 0.031,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 55/151 (36%), Gaps = 25/151 (16%)

Query: 147 RIINSMRCRMIAENFIECSTPILTAS----------SPEGARDFLVPSRVNQGSFYALPQ 196
           ++   +    +   F+E  +PIL  +            E ++      RV++        
Sbjct: 210 KLERDITKFFVDRGFLEIKSPILIPAEYVERMGINNDTELSKQIF---RVDKNLCLRPML 266

Query: 197 APQQYKQL-----LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM--EMSFVEQDDI 249
           AP  Y  L     ++     + F++ PC+R ++        EF  ++     S   ++++
Sbjct: 267 APTLYNYLRKLDRILPGPI-KVFEVGPCYR-KESDGKEHLEEFTMVNFCQMGSGCTRENL 324

Query: 250 LNTMENVLRGV---FEEFSNGNTVSNNFLRI 277
              ++  L  +   FE   +   V  + L I
Sbjct: 325 EALIKEFLDYLEIDFEIVGDSCMVYGDTLDI 355


>gi|242208640|ref|XP_002470170.1| predicted protein [Postia placenta Mad-698-R]
 gi|220730772|gb|EED84624.1| predicted protein [Postia placenta Mad-698-R]
          Length = 188

 Score = 45.1 bits (105), Expect = 0.033,   Method: Composition-based stats.
 Identities = 17/35 (48%), Positives = 21/35 (60%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVAN 53
             VR SGWVHR+R    IIF+ +RD  G  Q V +
Sbjct: 127 KRVRTSGWVHRLRDQNKIIFVVLRDGTGYLQCVLS 161


>gi|298674282|ref|YP_003726032.1| pyrrolysyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298287270|gb|ADI73236.1| pyrrolysyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 414

 Score = 45.1 bits (105), Expect = 0.035,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 58/148 (39%), Gaps = 25/148 (16%)

Query: 134 RRDTLHKNIV-----KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
           RR+   +        +  ++  ++    + + FIE   PI+               ++++
Sbjct: 187 RRNDFKQMYENDREEQIAKLERTISQFFVDKGFIEIKAPIIIDIDSVKKMGIDTDHKLSK 246

Query: 189 GSFYALPQ-------APQQYKQLLMASGFD-------RYFQIAPCFRDEDPRSDRLPGEF 234
             FY   +       AP  Y+ L     FD       + F+I PC+R E   S     EF
Sbjct: 247 QIFYLDNKHCLRPMLAPGLYQWL---KNFDKILPDPIKIFEIGPCYRKESEGSQ-HLEEF 302

Query: 235 YQLDM--EMSFVEQDDILNTMENVLRGV 260
              +     S   ++++LN ++++L+ +
Sbjct: 303 TMFNFCQMGSGANRENLLNHIDDLLKHL 330


>gi|313620967|gb|EFR92118.1| lysyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 102

 Score = 45.1 bits (105), Expect = 0.036,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 13  GVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
            + +    V ++G +   R  G + F  I+D +   Q+    D+   +
Sbjct: 55  DLEEAAIEVSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGED 102


>gi|47215108|emb|CAG02532.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1438

 Score = 45.1 bits (105), Expect = 0.040,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 4/95 (4%)

Query: 472  NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
                  KA   DL+    E    G R+   E +  A     +     +  +       + 
Sbjct: 1342 EGTEQTKAKAADLLLGLGETVGLGERHFSPETVEAALRQHAVQ----DASYRWYINMRRV 1397

Query: 532  GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQ 566
                  G   G +R +  LL   ++R+V + P  +
Sbjct: 1398 KPLRTSGWGMGSERYLCWLLQHDDIRDVVIIPRMK 1432


>gi|119720736|ref|YP_921231.1| asparagine synthetase A [Thermofilum pendens Hrk 5]
 gi|119525856|gb|ABL79228.1| aspartate-ammonia ligase [Thermofilum pendens Hrk 5]
          Length = 323

 Score = 44.7 bits (104), Expect = 0.044,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 30/134 (22%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDL-VCNGFEI 491
           E  W+++ P   ++ E                        D  + +   YDL V    EI
Sbjct: 210 EPVWVVNIPREFYDFE------------------------DPETGRWDNYDLYVPRVGEI 245

Query: 492 ASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG-MPPHGGIAAGIDRIVMLL 550
            SG  R +  E +L      G+        +  L    + G + P  G   G++R+++ +
Sbjct: 246 LSGARREYEYEKILSKMKRDGVRP----ENYRVLLDLAREGRLLPSAGAGIGVERLLLWV 301

Query: 551 LGAKNVREVSLFPM 564
            G +++  V  FP 
Sbjct: 302 TGVRHIGIVQPFPR 315



 Score = 40.1 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 64/184 (34%), Gaps = 23/184 (12%)

Query: 139 HKNIVKRTRIINSMRCRMIAENFIECSTPILTASS----PEGARDFLVPSRVN---QGSF 191
                  T  ++ +   ++   F      + + S+    P+   DF +  R+     G  
Sbjct: 29  RSIARITTYTLSFLSRYLVERGFDWVLPVVFSKSTDPLWPDP--DFSIEKRIEVEIYGET 86

Query: 192 YALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPR---SDRLPGEFYQLDMEMSFVEQDD 248
               Q+   +KQ+L++    + F  +P  R E  +   +     EF QLD E+       
Sbjct: 87  VRSTQSMIVHKQVLVSLLSPKIFVFSPNVRIETRKRASTGIHAYEFTQLDFEVRGASSSY 146

Query: 249 ILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVH 308
           I + +E++L+              +FL           G++ P++  P  + +  E    
Sbjct: 147 IRSLVEDMLKSYVSSLKREMEHELSFL-----------GSELPEIMTPFKVVDSKELEEE 195

Query: 309 SEFR 312
               
Sbjct: 196 YGKE 199


>gi|271965735|ref|YP_003339931.1| asparaginase like protein 1-like protein [Streptosporangium roseum
           DSM 43021]
 gi|270508910|gb|ACZ87188.1| asparaginase like protein 1-like protein [Streptosporangium roseum
           DSM 43021]
          Length = 343

 Score = 44.7 bits (104), Expect = 0.045,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 12/114 (10%)

Query: 451 KIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSN 510
             D    PF     G          +  A   DL+    E+   G R+   E  L+A  +
Sbjct: 234 HYDHLSVPFYQAYAGD--------STRTALNADLLFGIGEVVGCGERHMNGEEALRALEH 285

Query: 511 VGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             +S       +    R  +       G   GI+R +M LL + ++RE+ L P 
Sbjct: 286 HEVSP----ASYDWYLRMKRARPMRTAGFGLGIERWLMWLLRSDDIRELQLVPR 335


>gi|226328242|ref|ZP_03803760.1| hypothetical protein PROPEN_02135 [Proteus penneri ATCC 35198]
 gi|225202975|gb|EEG85329.1| hypothetical protein PROPEN_02135 [Proteus penneri ATCC 35198]
          Length = 100

 Score = 44.7 bits (104), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 2  HRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYG 46
           +Y   S  +L  ++V   V ++G +   R  G   F  ++D  G
Sbjct: 50 QKYDAMSAEELEAANV--EVAIAGRMMTRRIMGKASFATLQDMGG 92


>gi|207111250|ref|ZP_03245412.1| lysyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 58

 Score = 44.7 bits (104), Expect = 0.053,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 144 KRTRIINSMRCRMIAENFIECSTPILTA-SSPEGARDFLVPSRVNQ 188
           KR+ I++S+R     E F+E  TP++        AR F+      +
Sbjct: 11  KRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALE 56


>gi|256088189|ref|XP_002580235.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238665761|emb|CAZ36474.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 55

 Score = 44.3 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT-MENVLRGVFEE 263
            + + P FR E+  +     EFY L++E  +++  D L   +E +++ +  E
Sbjct: 1   VYTLNPTFRAENSNTRYHLAEFYMLEVESIYLDNIDSLCIEIEMLIKKILNE 52


>gi|15606147|ref|NP_213524.1| lysyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|8928390|sp|O66963|SYK3_AQUAE RecName: Full=Uncharacterized protein aq_763
 gi|2983331|gb|AAC06920.1| lysyl-tRNA synthetase-like protein [Aquifex aeolicus VF5]
          Length = 293

 Score = 44.3 bits (103), Expect = 0.062,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 4/110 (3%)

Query: 445 WNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVM 504
           + E E+ + F    F +            + +  A +++L   G E+A+G       E +
Sbjct: 179 FIEVERHLGFNRPTFLINFPERLCALAK-VRNGYAERFELFIKGIELANGWTEETNPEEV 237

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
            +        + +  +      +A +  MP   G + GIDR+  L LG +
Sbjct: 238 RKRLEREAKKRNLPLDE--DFIKAHE-DMPECAGCSLGIDRLFSLFLGKE 284


>gi|296080917|emb|CBI18747.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score = 44.3 bits (103), Expect = 0.066,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 33/109 (30%), Gaps = 14/109 (12%)

Query: 458 PFTMPQGGMESLKGNDLLSIKAFQYDLVCN-GFEIASGGIRNHMSEVMLQAFSNVGISKE 516
           PF M                    +D+V      +  G        ++      +GI  E
Sbjct: 44  PFYMRVNDDGETVA---------AFDVVVPKAGTLIRGSQNEERMNMLSTRIKELGIRSE 94

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMS 565
             E          + G   + G +   + +V+   G  NV +V  FP S
Sbjct: 95  EYE----WYMDLRRHGTVKNSGFSVAFEHVVLFATGLVNVADVIPFPRS 139


>gi|328480170|gb|EGF49115.1| asparaginyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 37

 Score = 44.3 bits (103), Expect = 0.066,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 535 PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDL 571
           PH G   G++R +  +    ++RE   FP   N    
Sbjct: 1   PHSGFGLGLERAITWICKLDHLREAIPFPRMINRLKP 37


>gi|297720131|ref|NP_001172427.1| Os01g0571700 [Oryza sativa Japonica Group]
 gi|255673379|dbj|BAH91157.1| Os01g0571700 [Oryza sativa Japonica Group]
          Length = 104

 Score = 44.3 bits (103), Expect = 0.070,   Method: Composition-based stats.
 Identities = 17/37 (45%), Positives = 20/37 (54%)

Query: 5  RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDI 41
          R   C +LG  D G  VRL GWV   R H G+ FL +
Sbjct: 56 RDELCDELGAGDAGRCVRLCGWVALHRAHAGLTFLIL 92


>gi|300707199|ref|XP_002995818.1| hypothetical protein NCER_101190 [Nosema ceranae BRL01]
 gi|239605038|gb|EEQ82147.1| hypothetical protein NCER_101190 [Nosema ceranae BRL01]
          Length = 133

 Score = 43.9 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 6/112 (5%)

Query: 12  LGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
           L  S V   ++  G+V  +       FL +RD     Q V +      E AKS+ +E  +
Sbjct: 23  LNKSYVDKAIKTRGFVCNINVFKKTTFLTLRDQNRTLQCVLS----TTEAAKSLNNESYI 78

Query: 72  CIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPES 123
            ++G +   S +  + +    ++EL      IL+ +E +    + +  Y   
Sbjct: 79  EVEGKICLVSTKIKSCSFS--ELELQLHTFAILNASESVLPFSYKDVSYTLE 128


>gi|294666321|ref|ZP_06731570.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|292603923|gb|EFF47325.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 144

 Score = 43.9 bits (102), Expect = 0.073,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 196 QAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMEN 255
            +P+   + L+A+G    +++   FR+ +      P EF  L+          +      
Sbjct: 4   TSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNP-EFSMLEWYRVGWNDRRLAQETIE 62

Query: 256 VLR 258
           ++R
Sbjct: 63  LVR 65


>gi|74501411|sp|Q6WRH6|PYLS_METBA RecName: Full=Pyrrolysyl-tRNA synthetase; AltName:
           Full=Pyrrolysine--tRNA ligase; Short=PylRS
 gi|33466218|gb|AAQ19545.1| PylS [Methanosarcina barkeri]
          Length = 419

 Score = 43.9 bits (102), Expect = 0.077,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 55/151 (36%), Gaps = 25/151 (16%)

Query: 147 RIINSMRCRMIAENFIECSTPILTAS----------SPEGARDFLVPSRVNQGSFYALPQ 196
           ++   +    +   F+E  +PIL  +            E ++      RV++        
Sbjct: 210 KLERDITKFFVDRGFLEIKSPILIPAEYVERMGINNDTELSKQIF---RVDKNLCLRPML 266

Query: 197 APQQYKQL-----LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM--EMSFVEQDDI 249
           AP  Y  L     ++     + F++ PC+R ++        EF  ++     S   ++++
Sbjct: 267 APTLYNYLRKLDRILPGPI-KIFEVGPCYR-KESDGKEHLEEFTMVNFCQMGSGCTRENL 324

Query: 250 LNTMENVLRGV---FEEFSNGNTVSNNFLRI 277
              ++  L  +   FE   +   V  + L I
Sbjct: 325 EALIKEFLDYLEIDFEIVGDSCMVYGDTLDI 355


>gi|162329880|pdb|2E3C|A Chain A, Crystal Structure Of The Catalytic Domain Of Pyrrolysyl-
           Trna Synthetase
 gi|185177681|pdb|2ZCD|A Chain A, Crystal Structure Of The Catalytic Domain Of Pyrrolysyl-
           Trna Synthetase In Complex With Amppnp
 gi|185177682|pdb|2ZCE|A Chain A, Crystal Structure Of The Catalytic Domain Of Pyrrolysyl-
           Trna Synthetase In Complex With Pyrrolysine And An Atp
           Analogue
 gi|215794561|pdb|2ZIN|A Chain A, Crystal Structure Of The Catalytic Domain Of Pyrrolysyl-
           Trna Synthetase In Complex With Boclys And An Atp
           Analogue
 gi|215794562|pdb|2ZIO|A Chain A, Crystal Structure Of The Catalytic Domain Of Pyrrolysyl-
           Trna Synthetase In Complex With Aloclys-Amp And Pnp
          Length = 291

 Score = 43.9 bits (102), Expect = 0.078,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 50/136 (36%), Gaps = 22/136 (16%)

Query: 147 RIINSMRCRMIAENFIECSTPILTA----------SSPEGARDFLVPSRVNQGSFYALPQ 196
           ++   +    +   F+E  +PIL            +  E ++      RV++        
Sbjct: 82  KLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIF---RVDKNFCLRPML 138

Query: 197 APQQYKQL-----LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM--EMSFVEQDDI 249
           AP  Y  L      +     + F+I PC+R ++        EF  L+     S   ++++
Sbjct: 139 APNLYNYLRKLDRALPDPI-KIFEIGPCYR-KESDGKEHLEEFTMLNFCQMGSGCTRENL 196

Query: 250 LNTMENVLRGVFEEFS 265
            + + + L  +  +F 
Sbjct: 197 ESIITDFLNHLGIDFK 212


>gi|157835845|pdb|2Q7E|A Chain A, The Structure Of Pyrrolysyl-Trna Synthetase Bound To An
           Atp Analogue
 gi|157835848|pdb|2Q7G|A Chain A, Pyrrolysine Trna Synthetase Bound To A Pyrrolysine
           Analogue (Cyc) And Atp
 gi|157835849|pdb|2Q7H|A Chain A, Pyrrolysyl-Trna Synthetase Bound To Adenylated Pyrrolysine
           And Pyrophosphate
 gi|169404687|pdb|2ZIM|A Chain A, Pyrrolysyl-Trna Synthetase Bound To Adenylated Pyrrolysine
           And Pyrophosphate
          Length = 291

 Score = 43.9 bits (102), Expect = 0.084,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 50/136 (36%), Gaps = 22/136 (16%)

Query: 147 RIINSMRCRMIAENFIECSTPILTA----------SSPEGARDFLVPSRVNQGSFYALPQ 196
           ++   +    +   F+E  +PIL            +  E ++      RV++        
Sbjct: 82  KLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIF---RVDKNFCLRPML 138

Query: 197 APQQYKQL-----LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM--EMSFVEQDDI 249
           AP  Y  L      +     + F+I PC+R ++        EF  L+     S   ++++
Sbjct: 139 APNLYNYLRKLDRALPDPI-KIFEIGPCYR-KESDGKEHLEEFTMLNFCQMGSGCTRENL 196

Query: 250 LNTMENVLRGVFEEFS 265
            + + + L  +  +F 
Sbjct: 197 ESIITDFLNHLGIDFK 212


>gi|172053661|gb|ACB70968.1| pyrrolysyl-tRNA-synthetase [synthetic construct]
          Length = 420

 Score = 43.9 bits (102), Expect = 0.084,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 55/151 (36%), Gaps = 25/151 (16%)

Query: 147 RIINSMRCRMIAENFIECSTPILTAS----------SPEGARDFLVPSRVNQGSFYALPQ 196
           ++   +    +   F+E  +PIL  +            E ++      RV++        
Sbjct: 211 KLERDITKFFVDRGFLEIKSPILIPAEYVERMGINNDTELSKQIF---RVDKNLCLRPML 267

Query: 197 APQQYKQL-----LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM--EMSFVEQDDI 249
           AP  Y  L     ++     + F++ PC+R ++        EF  ++     S   ++++
Sbjct: 268 APTLYNYLRKLDRILPGPI-KIFEVGPCYR-KESDGKEHLEEFTMVNFCQMGSGCTRENL 325

Query: 250 LNTMENVLRGV---FEEFSNGNTVSNNFLRI 277
              ++  L  +   FE   +   V  + L I
Sbjct: 326 EALIKEFLDYLEIDFEIVGDSCMVYGDTLDI 356


>gi|116511956|ref|YP_809172.1| hypothetical protein LACR_1219 [Lactococcus lactis subsp. cremoris
           SK11]
 gi|116107610|gb|ABJ72750.1| Lysyl-tRNA synthetase (class II) [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 917

 Score = 43.5 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 7/93 (7%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPD-----SACFEIAKSVRSEWVLCI 73
               + G +   R  G I F D+ D+    Q+V   D     S      ++  +      
Sbjct: 687 EEHSIQGRLVSSRGRGAIFFADLSDNQSKIQLVIKRDVINEYSESENRLENFATWKKDVT 746

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSV 106
            G  +      +   I  G++ L     ++LS 
Sbjct: 747 IGDRVLVKGVLMRTQI--GELSLRVNSWKMLSK 777


>gi|300813522|ref|ZP_07093857.1| aspartate--tRNA ligase domain protein [Peptoniphilus sp. oral
          taxon 836 str. F0141]
 gi|300512368|gb|EFK39533.1| aspartate--tRNA ligase domain protein [Peptoniphilus sp. oral
          taxon 836 str. F0141]
          Length = 48

 Score = 43.5 bits (101), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/28 (50%), Positives = 18/28 (64%)

Query: 2  HRYRTHSCGDLGVSDVGSFVRLSGWVHR 29
          +  RT+ CGDL  +D+ S V L GWV R
Sbjct: 7  NLKRTNYCGDLRENDIDSEVILMGWVQR 34


>gi|221195426|ref|ZP_03568481.1| aspartate--ammonia ligase [Atopobium rimae ATCC 49626]
 gi|221184613|gb|EEE17005.1| aspartate--ammonia ligase [Atopobium rimae ATCC 49626]
          Length = 333

 Score = 43.5 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 18/135 (13%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--------LVCNG--- 488
           +P     E E +    H+  T   G  E+L+       ++  YD        L  +    
Sbjct: 185 YPELTPTERENRFVAKHH-TTFIVGIGETLRSGKPHDKRSPDYDDWHLNGDLLFWDNVLG 243

Query: 489 --FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
              EI+S GIR   + +  Q    + +S      +        +  +P   G   G  R+
Sbjct: 244 CALEISSMGIRVSPASLDRQ----LSVSGCDDRRKLPFHKMLLENKLPCTIGGGIGQSRL 299

Query: 547 VMLLLGAKNVREVSL 561
            MLLLG  +V EV  
Sbjct: 300 CMLLLGKAHVGEVQA 314


>gi|15673099|ref|NP_267273.1| hypothetical protein L129283 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12724077|gb|AAK05215.1|AE006344_4 conserved hypothetical protein [Lactococcus lactis subsp. lactis
           Il1403]
          Length = 921

 Score = 43.5 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 45/129 (34%), Gaps = 6/129 (4%)

Query: 19  SFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACF--EIAKSVRSEWVLCIDGL 76
               + G +  +R  G + F D+ D+    Q+V   D+     E+   + +  +   D  
Sbjct: 691 KEYSIHGKLISLRGRGAMQFADLADNQAKIQLVIKRDTLNEYAELENRLENFAIWKKDVT 750

Query: 77  VMSRS-AETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFL-DLR 134
           +  R   +       TG++ L     ++LS        +            +  +L  +R
Sbjct: 751 IGDRVLVKGNLMRTQTGELSLRVNSCKMLSKTLRELTDIEKIDHT--KFIERTEYLSRIR 808

Query: 135 RDTLHKNIV 143
           RD L    V
Sbjct: 809 RDLLSNRFV 817


>gi|212223151|ref|YP_002306387.1| RecJ-like exonuclease [Thermococcus onnurineus NA1]
 gi|212008108|gb|ACJ15490.1| RecJ-like exonuclease [Thermococcus onnurineus NA1]
          Length = 741

 Score = 43.5 bits (101), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 9/89 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G+L     G  VR+ G V +++  GG     I D  GIT   A  ++       ++   
Sbjct: 215 IGELRKDMAGKTVRIRGRVTQIQVTGGPTVFTITDGTGITWAAA-FEAPGVRAYPNINVG 273

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELS 97
            ++ I G +   S E         QIE+S
Sbjct: 274 DIVEIIGKIAFHSGEI--------QIEVS 294


>gi|71893848|ref|YP_279294.1| asparagine synthetase A [Mycoplasma hyopneumoniae J]
          Length = 320

 Score = 43.5 bits (101), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 4/82 (4%)

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL+    EI   G R       L++  N   + +  +          +       G   G
Sbjct: 235 DLLMGIGEIVGSGERCFDYNETLKSLLNHKNNPQNYK----WYLEMKEKTPMITSGFGLG 290

Query: 543 IDRIVMLLLGAKNVREVSLFPM 564
           ++R+++ L+G  ++REV L P 
Sbjct: 291 MERLMLFLIGKNDIREVQLIPR 312


>gi|54020547|ref|YP_116007.1| asparagine synthetase A [Mycoplasma hyopneumoniae 232]
 gi|53987720|gb|AAV27921.1| asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|144227664|gb|AAZ44583.2| conserved hypothetical protein [Mycoplasma hyopneumoniae J]
          Length = 351

 Score = 43.1 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 4/82 (4%)

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL+    EI   G R       L++  N   + +  +          +       G   G
Sbjct: 266 DLLMGIGEIVGSGERCFDYNETLKSLLNHKNNPQNYK----WYLEMKEKTPMITSGFGLG 321

Query: 543 IDRIVMLLLGAKNVREVSLFPM 564
           ++R+++ L+G  ++REV L P 
Sbjct: 322 MERLMLFLIGKNDIREVQLIPR 343


>gi|312601448|gb|ADQ90703.1| asparagine synthetase A [Mycoplasma hyopneumoniae 168]
          Length = 333

 Score = 43.1 bits (100), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 4/82 (4%)

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL+    EI   G R       L++  N   + +  +          +       G   G
Sbjct: 248 DLLMGIGEIVGSGERCFDYNETLKSLLNHKNNPQNYK----WYLEMKEKTPMITSGFGLG 303

Query: 543 IDRIVMLLLGAKNVREVSLFPM 564
           ++R+++ L+G  ++REV L P 
Sbjct: 304 MERLMLFLIGKNDIREVQLIPR 325


>gi|258513392|ref|YP_003189614.1| Pyrrolysine-tRNA ligase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777097|gb|ACV60991.1| Pyrrolysine-tRNA ligase [Desulfotomaculum acetoxidans DSM 771]
          Length = 278

 Score = 43.1 bits (100), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 59/181 (32%), Gaps = 25/181 (13%)

Query: 104 LSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAE---- 159
           L+ +EE     F          +K   + L  ++  +    R        C +       
Sbjct: 16  LNASEEEKNMSFSST-SDREAAYKRVEMRLINESKQRLNKLRHETKRPAICALENRLAAA 74

Query: 160 ----NFIECSTPILTA-------SSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMAS 208
                F++ +TP++ +       +  +    F     + +        AP  Y   ++  
Sbjct: 75  LRGAGFVQVATPVILSKKLLGKMTITDEHALFSQVFWIEENKCLRPMLAPNLYY--ILKD 132

Query: 209 GFD------RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFE 262
                    R F+I  CFR E   S+    EF  L++    + ++     +  + + V +
Sbjct: 133 LLRLWEKPVRIFEIGSCFRKESQGSN-HLNEFTMLNLVEWGLPEEQRQKRISELAKLVMD 191

Query: 263 E 263
           E
Sbjct: 192 E 192


>gi|72080831|ref|YP_287889.1| asparagine synthetase A [Mycoplasma hyopneumoniae 7448]
          Length = 352

 Score = 43.1 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 4/82 (4%)

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL+    EI   G R       L++  N   + +  +          +       G   G
Sbjct: 267 DLLMGIGEIVGSGERCFDYNETLKSLLNHKNNPQNYK----WYLEMKEKTPMITSGFGLG 322

Query: 543 IDRIVMLLLGAKNVREVSLFPM 564
           ++R+++ L+G  ++REV L P 
Sbjct: 323 MERLMLFLIGKNDIREVQLIPR 344


>gi|144575486|gb|AAZ53866.2| conserved hypothetical protein [Mycoplasma hyopneumoniae 7448]
          Length = 351

 Score = 43.1 bits (100), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 4/82 (4%)

Query: 483 DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAG 542
           DL+    EI   G R       L++  N   + +  +          +       G   G
Sbjct: 266 DLLMGIGEIVGSGERCFDYNETLKSLLNHKNNPQNYK----WYLEMKEKTPMITSGFGLG 321

Query: 543 IDRIVMLLLGAKNVREVSLFPM 564
           ++R+++ L+G  ++REV L P 
Sbjct: 322 MERLMLFLIGKNDIREVQLIPR 343


>gi|227505308|ref|ZP_03935357.1| error-prone DNA polymerase [Corynebacterium striatum ATCC 6940]
 gi|227198106|gb|EEI78154.1| error-prone DNA polymerase [Corynebacterium striatum ATCC 6940]
          Length = 1013

 Score = 42.7 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 16/106 (15%)

Query: 8    SCGDLGVSDVGSFVRLSGWV-HRVRPH--GGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
            +   L     G+ VR++G V HR RP    G+IFL + D  G+  V+ +P    +++ K+
Sbjct: 911  TAAQLRQVPDGTRVRIAGIVTHRQRPQTAAGVIFLGLEDETGLMNVMVSP--GLWQLNKT 968

Query: 65   VRSEWV-LCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEE 109
            V      L I G+V +           TG + + A K+E L++ E 
Sbjct: 969  VARTSKALVIRGIVQN----------ATGAVNVVADKLEPLAMGEW 1004


>gi|89632594|gb|ABD77529.1| asparaginyl-tRNA synthetase [Ictalurus punctatus]
          Length = 152

 Score = 42.7 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 19  SFVRLSGWVHRVRPHGG-IIFLDIRDHYGITQV 50
             V++ GWVHR+R  G  ++F+ +RD  G  Q 
Sbjct: 119 QRVKVFGWVHRLRRQGKNLLFIVLRDGTGFLQC 151


>gi|213162580|ref|ZP_03348290.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 37

 Score = 42.7 bits (99), Expect = 0.17,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 11/37 (29%)

Query: 325 EVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIFW 361
                   G    R   D    + +  G  GLAYI  
Sbjct: 1   VAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKV 37


>gi|57640090|ref|YP_182568.1| RecJ-like exonuclease [Thermococcus kodakarensis KOD1]
 gi|57158414|dbj|BAD84344.1| RecJ-like exonuclease, containing OB-fold nucleic acid-binding
           domains [Thermococcus kodakarensis KOD1]
          Length = 741

 Score = 42.7 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 61/394 (15%), Positives = 119/394 (30%), Gaps = 53/394 (13%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
             +L     G  VR+ G + +V+  GG     I D  GIT V A  ++       ++   
Sbjct: 215 IAELSKDMAGKTVRIQGRITQVQVTGGPTVFTITDGTGITWVAA-FEAPGVRAYPNINVG 273

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            ++ + G V   S          G+I++ A  +  L   +   +    E E         
Sbjct: 274 DIVEVIGKVAFHS----------GEIQIEASDMARLWGPDAARVKQQIEAE--------- 314

Query: 129 RFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQ 188
             LD R        +  + ++  ++ +++   F      ++  +  EG R  L+    + 
Sbjct: 315 --LDRRAQPEDVGFLVESEVLEKLKPKIMKAAF------MIRRAILEG-RPILLRHHADA 365

Query: 189 GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDD 248
             +           +  +    ++   I+P  +       R P           F E +D
Sbjct: 366 DGY-----TSGLALEYAIVPLIEK---ISPDPQARWKLFKRRPS-------RAPFYELED 410

Query: 249 ILNTMENVLRGVFEEFSNG------NTVSNNFLRICYDDAIRRYG--TDKPDLRNPIIMH 300
           +L  +  ++    E+F +                I     IR YG      D  +P    
Sbjct: 411 VLKDIIFMVED-HEKFGDPLPLVVIVDNGGTSEDIPAYKRIRAYGVPIVVIDHHDPREWV 469

Query: 301 NVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPGLAYIF 360
           +  +  V     V      V  GY             R     + +  +           
Sbjct: 470 SEDKAKVDDYVDVHVNPHHVKRGYYELTAGMLATEVARFINPEVEDKIKHLPAIAGTGDK 529

Query: 361 WRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQ 394
            +  E      +   AK L   + + I   +D +
Sbjct: 530 SKAPEFYQYLEIAKKAKGLTEEDLKKIAEVIDHE 563


>gi|153953610|ref|YP_001394375.1| asparaginyl-tRNA synthetase-related protein [Clostridium kluyveri
           DSM 555]
 gi|219854232|ref|YP_002471354.1| hypothetical protein CKR_0889 [Clostridium kluyveri NBRC 12016]
 gi|146346491|gb|EDK33027.1| Asparaginyl-tRNA synthetase-related protein [Clostridium kluyveri
           DSM 555]
 gi|219567956|dbj|BAH05940.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 324

 Score = 42.7 bits (99), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 46/119 (38%), Gaps = 8/119 (6%)

Query: 448 EEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQ-YDLVCNGFEIASGG--IRNHMSEVM 504
           E      A  PF +     E     DL +   ++ YDL+     +       R +  + +
Sbjct: 199 EALASKEATRPFWLINHKREFYDAEDLENKGTYKNYDLIWPMGYVEGLSGGEREYNYDRI 258

Query: 505 LQAFSNVGISKEVVENRFGGLYRAFQCG-MPPHGGIAAGIDRIVMLLLGAKNVREVSLF 562
           +      G+ ++ +++         + G +P   G   G++R+   +    ++ EV++F
Sbjct: 259 ITRMREAGMDEQSMKD----YIELAKRGEIPKTAGAGFGVERMTRFVCQQDDIDEVTVF 313



 Score = 40.4 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 66/211 (31%), Gaps = 18/211 (8%)

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYAL 194
           R+ L   +  +  I+ S+   M     +     +++  +               G  + +
Sbjct: 26  REKLPSILKIQQAILRSVDDYMYKNGVVRLLPNMISPITDPLCHSVEDCDFTYGGQKFNV 85

Query: 195 PQAPQQYKQLLMASG-FDRYFQIAPCFRDE--DPRSDRLPGEFYQLDMEMSFVEQDDILN 251
            ++   +KQL +++    + + ++P  R E  +    R   EF Q+D E      D +  
Sbjct: 86  TKSMIFHKQLALSNPYLQKIYIVSPNVRLELPERGDVRHLFEFTQVDFEFKDATMDTVFG 145

Query: 252 TMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEF 311
            ME ++   F             L           GT   D+  P   H   E       
Sbjct: 146 FMEGLIEQAFCYIKEECKEEFKKL---------GVGTSHLDVSGPFERHTTQELKAKYGE 196

Query: 312 RVFSKILSVNPGYEVWAIPAKGGGGNRAFCD 342
             F  + S       W I  K     R F D
Sbjct: 197 D-FEALASKEATRPFWLINHK-----REFYD 221


>gi|284991707|ref|YP_003410261.1| DNA polymerase III subunit alpha [Geodermatophilus obscurus DSM
            43160]
 gi|284064952|gb|ADB75890.1| DNA polymerase III, alpha subunit [Geodermatophilus obscurus DSM
            43160]
          Length = 1268

 Score = 42.7 bits (99), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 7/95 (7%)

Query: 9    CGDLGVSDVGSFVRLSG-WVHR----VRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
             G+L  S  G+ V ++G  V      +R    ++F+ + D  G T      D+     A 
Sbjct: 1079 AGELLGSRSGAEVLVAGVKVATQTPPIRSGRRVVFVTLDDGTGCTDSTFFEDAQGP-YAS 1137

Query: 64   SVRSEWVLCIDGLVMSRSAETINANIITGQIELSA 98
            +V   W+L I G V+ R+     +   TG  EL A
Sbjct: 1138 TVFHSWLLVIRG-VLRRTGPRGVSLRATGAWELPA 1171


>gi|292558063|gb|ADE31064.1| Aspartyl/asparaginyl-tRNA synthetase [Streptococcus suis GZ1]
          Length = 69

 Score = 42.4 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 22/55 (40%)

Query: 17 VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVL 71
          VG  V +  WV      G + FL +RD     Q VA   ++     K +    ++
Sbjct: 15 VGQEVTIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPTSSKNSVKKLVLRSLM 69


>gi|328876816|gb|EGG25179.1| hypothetical protein DFA_03427 [Dictyostelium fasciculatum]
          Length = 657

 Score = 42.4 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 32/85 (37%), Gaps = 3/85 (3%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD--FLVPSRVNQGSF 191
           R       +  +  + + +   ++ ++F+E  +P LT  +               + G  
Sbjct: 325 RLPLHQATVRLKASLESFVYQYLVKDSFMEVHSPTLTTVACYTHYPGHPTEHYTADAGYN 384

Query: 192 YALPQAPQQYKQLLMASGFDRYFQI 216
            A    P  Y  +++   FD+ F++
Sbjct: 385 LAYSIDPSVYH-IMLVGIFDKVFEV 408



 Score = 39.7 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 4/86 (4%)

Query: 464 GGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS-EVMLQAFSNVGISKEVVENRF 522
              +SL   D ++ +A  + ++ NG+ +ASG  R +   E+  +  S +   +  ++   
Sbjct: 548 PTSDSLAMIDPVTGEAQLFWVLLNGWLVASGSQRLNDPIEIEKRLKSRINREQVPLDPSI 607

Query: 523 GGLYRAFQCGMPPHGGIAAGIDRIVM 548
                    G P +GG +   D +V 
Sbjct: 608 ---LNQLSYGNPYNGGFSLNYDLLVA 630


>gi|84496189|ref|ZP_00995043.1| putative DNA polymerase III alpha subunit [Janibacter sp. HTCC2649]
 gi|84382957|gb|EAP98838.1| putative DNA polymerase III alpha subunit [Janibacter sp. HTCC2649]
          Length = 1282

 Score = 42.4 bits (98), Expect = 0.22,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 47/137 (34%), Gaps = 18/137 (13%)

Query: 11   DLGVSDVGSFVRLSG-WVHR----VRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
            DL  S   S V ++G  V      +R    ++FL + D  G        D      A +V
Sbjct: 1096 DLLRSRSNSEVWVAGVKVATQTPPIRSGRRVVFLTLDDSTGPVDATFFEDVQGP-YAATV 1154

Query: 66   RSEWVLCIDGLVMSRSAETINANIITGQIEL-----------SAQKIEILSVAEELPLPV 114
               W+L + G+V    +  I+    TG  EL            A  +  L  A+   +  
Sbjct: 1155 FHSWLLLVRGVVRRTGSRGISVR-ATGAWELAGLWEAWRDGGHAAVVRALENADAEAIAR 1213

Query: 115  FGEREYPESIRFKYRFL 131
                E     + + R L
Sbjct: 1214 AQAGEKEADAQGRRRVL 1230


>gi|297520244|ref|ZP_06938630.1| lysyl-tRNA synthetase [Escherichia coli OP50]
          Length = 93

 Score = 42.4 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 10/52 (19%)

Query: 5  RTHSCGDLGVSDVGSF----------VRLSGWVHRVRPHGGIIFLDIRDHYG 46
          R H+   L     G            V ++G +   R  G   F+ ++D  G
Sbjct: 42 RDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGG 93


>gi|255007563|ref|ZP_05279689.1| putative glycosyl hydrolase, beta-N-acetylhexosaminidase
           [Bacteroides fragilis 3_1_12]
          Length = 645

 Score = 42.4 bits (98), Expect = 0.24,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 61/183 (33%), Gaps = 11/183 (6%)

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ--IAPCFRDEDPRSDRLPGEFYQLD 238
            +   V   ++Y +       +  L  +GF +YF+   +  +      SD  PG     D
Sbjct: 166 FLQDYVKIMAYYKMNT----LQIHLNDNGFKQYFEHDWSKTYAAFRLESDTYPG-LTAED 220

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              +  E  D+    EN+   +  E  +    +  F     +   + YG D  DL NP  
Sbjct: 221 GYYTKREFIDLQKLAENLYVEIIPEI-DAPAHTLAFTHYKPEIGSKEYGMDHLDLFNPET 279

Query: 299 ---MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
              M  + + ++  +  VF          E            RAF D    +  S G+  
Sbjct: 280 YKFMDGLFKEYLEGDEPVFRGKKVHIGTDEYSNKKKDVVEKFRAFTDHYIRYVESFGKQA 339

Query: 356 LAY 358
             +
Sbjct: 340 CVW 342


>gi|313145255|ref|ZP_07807448.1| glycosyl hydrolase [Bacteroides fragilis 3_1_12]
 gi|313134022|gb|EFR51382.1| glycosyl hydrolase [Bacteroides fragilis 3_1_12]
          Length = 653

 Score = 42.4 bits (98), Expect = 0.25,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 61/183 (33%), Gaps = 11/183 (6%)

Query: 181 LVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQ--IAPCFRDEDPRSDRLPGEFYQLD 238
            +   V   ++Y +       +  L  +GF +YF+   +  +      SD  PG     D
Sbjct: 174 FLQDYVKIMAYYKMNT----LQIHLNDNGFKQYFEHDWSKTYAAFRLESDTYPG-LTAED 228

Query: 239 MEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPII 298
              +  E  D+    EN+   +  E  +    +  F     +   + YG D  DL NP  
Sbjct: 229 GYYTKREFIDLQKLAENLYVEIIPEI-DAPAHTLAFTHYKPEIGSKEYGMDHLDLFNPET 287

Query: 299 ---MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWARSQGQPG 355
              M  + + ++  +  VF          E            RAF D    +  S G+  
Sbjct: 288 YKFMDGLFKEYLEGDEPVFRGKKVHIGTDEYSNKKKDVVEKFRAFTDHYIRYVESFGKQA 347

Query: 356 LAY 358
             +
Sbjct: 348 CVW 350


>gi|254419943|ref|ZP_05033667.1| DNA polymerase III, alpha subunit subfamily, putative [Brevundimonas
            sp. BAL3]
 gi|196186120|gb|EDX81096.1| DNA polymerase III, alpha subunit subfamily, putative [Brevundimonas
            sp. BAL3]
          Length = 1121

 Score = 42.4 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 5/83 (6%)

Query: 6    THSCGDLGVSDVGSFVRLSG--WVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
            T +C +L     G+ VR +G   V +    G  IF+ + D  G+T +V    +  FE  +
Sbjct: 981  TLTCAELETRRSGAKVRTAGVVLVRQRPGKGNAIFITLEDETGVTNLVLW--ARMFEEYR 1038

Query: 64   SVRSEW-VLCIDGLVMSRSAETI 85
             V     ++ ++G+V       +
Sbjct: 1039 RVVMAARLMGVEGVVEKSPEGVV 1061


>gi|254780928|ref|YP_003065341.1| histidyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040605|gb|ACT57401.1| histidyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 496

 Score = 42.4 bits (98), Expect = 0.26,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 73/230 (31%), Gaps = 21/230 (9%)

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALP 195
           D   K I  R RI++S+R       F    TP+L  S   G +      R N+G F +L 
Sbjct: 17  DCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLG-KFLPDEDRPNKGVF-SLQ 74

Query: 196 QAPQQY----------KQLLMASGFD------RYFQIAPCFRDEDPRSDRLPGEFYQLDM 239
               Q+              +A  FD      R ++I P FR+E     R   +F Q D+
Sbjct: 75  DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF-RQFIQCDV 133

Query: 240 EMSFVEQDDILNTMENVLRGVFEEF--SNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPI 297
           +      +     M  ++    E       +       R   D  + + G    D  N  
Sbjct: 134 DNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNER 193

Query: 298 IMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEW 347
           ++       +        K+L      +      KG        D M  +
Sbjct: 194 LIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSF 243


>gi|73668380|ref|YP_304395.1| pyrolysyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|118573259|sp|Q46E77|PYLS_METBF RecName: Full=Pyrrolysyl-tRNA synthetase; AltName:
           Full=Pyrrolysine--tRNA ligase; Short=PylRS
 gi|72395542|gb|AAZ69815.1| Pyrrolysyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 419

 Score = 42.0 bits (97), Expect = 0.28,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 57/151 (37%), Gaps = 25/151 (16%)

Query: 147 RIINSMRCRMIAENFIECSTPILTAS----------SPEGARDFLVPSRVNQGSFYALPQ 196
           ++   +    +  +F+E  +PIL  +            E ++      RV++        
Sbjct: 210 KLERDITKFFVDRDFLEIKSPILIPAEYVERMGINNDTELSKQIF---RVDKNLCLRPML 266

Query: 197 APQQYKQL-----LMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDM--EMSFVEQDDI 249
           AP  Y  L     ++     + F++ PC+R ++        EF  ++     S   ++++
Sbjct: 267 APTLYNYLRKLDRILPDPI-KIFEVGPCYR-KESDGKEHLEEFTMVNFCQMGSGCTRENL 324

Query: 250 LNTMENVLRGV---FEEFSNGNTVSNNFLRI 277
            + ++  L  +   FE   +   V  + L I
Sbjct: 325 ESLIKEFLDYLEIDFEIVGDSCMVYGDTLDI 355


>gi|207093905|ref|ZP_03241692.1| hypothetical protein HpylHP_14305 [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 33

 Score = 42.0 bits (97), Expect = 0.29,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 11/27 (40%)

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGI 543
             +        A + G PPHGG A  +
Sbjct: 1   SAKENLAFYLEALKFGAPPHGGFAIAL 27


>gi|257387954|ref|YP_003177727.1| phosphoesterase RecJ domain protein [Halomicrobium mukohataei DSM
           12286]
 gi|257170261|gb|ACV48020.1| phosphoesterase RecJ domain protein [Halomicrobium mukohataei DSM
           12286]
          Length = 636

 Score = 42.0 bits (97), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 11/88 (12%)

Query: 18  GSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLV 77
           G  V + G V +++  GG     +RD  G+    A  D A      +V    V  + G V
Sbjct: 121 GETVTVRGEVLQIKQTGGPTIFQLRDESGVVPCAA-FDEAGVRAFPAVDLGDVAEVTGRV 179

Query: 78  MSRSAETINANIITGQIELSAQKIEILS 105
            SR           G +++   ++ +L 
Sbjct: 180 ESR----------NGGVQVEVDELTVLG 197


>gi|89096141|ref|ZP_01169034.1| histidyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89088995|gb|EAR68103.1| histidyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 430

 Score = 42.0 bits (97), Expect = 0.34,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 46/141 (32%), Gaps = 20/141 (14%)

Query: 143 VKRTRIINSMRCRMIAENFIECSTPILT-----ASSPEGARDFLVPSRVN------QGSF 191
           + R RI   +    I        TPIL      AS   G  + L              + 
Sbjct: 21  IVRRRIQRELEDVFIQYGCKPLETPILNYTELLASKYGGGAEILEEMYTLSDRGGRDLAL 80

Query: 192 YALPQAPQQYKQLLMASGFD---RYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD- 247
                 P   K   M  G     + ++I   FRD   ++ R   EF Q  ++++  +   
Sbjct: 81  RYDLTIP-FAKAAAMNPGIRLPFKRYEIGRVFRDGPIKTGR-LREFTQCAVDIAGADSQL 138

Query: 248 ---DILNTMENVLRGVFEEFS 265
              +++    +  + +  + +
Sbjct: 139 AEAELMVMALDAFQRIGLDIT 159


>gi|300711176|ref|YP_003736990.1| hypothetical protein HacjB3_09075 [Halalkalicoccus jeotgali B3]
 gi|299124859|gb|ADJ15198.1| hypothetical protein HacjB3_09075 [Halalkalicoccus jeotgali B3]
          Length = 684

 Score = 41.6 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 11/95 (11%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
              VG  +R+ G V  VR  GG    ++RD  GI +  A  ++        +    ++ +
Sbjct: 198 TESVGERIRIEGRVVDVRQTGGPTIFEVRDETGIAECAAFKEA-GVRAYPEIEVGDLIRL 256

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIEILSVAE 108
            G V  R           G +++  + ++ L+ A+
Sbjct: 257 TGEVERRR----------GDVQVETESLKPLAEAD 281


>gi|71754381|ref|YP_086759.2| asparagine synthetase A [Agrobacterium tumefaciens]
 gi|222112709|ref|YP_002559296.1| Agrocin84-synthetase [Agrobacterium radiobacter K84]
 gi|71558921|gb|AAS02120.2| probable asparaginyl-tRNA synthetase [Agrobacterium tumefaciens]
 gi|221728486|gb|ACM31458.1| Agrocin84-synthetase [Agrobacterium radiobacter K84]
          Length = 353

 Score = 41.6 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 33/129 (25%), Gaps = 25/129 (19%)

Query: 433 EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIA 492
              WI   P                PF                S      DL+    EI 
Sbjct: 239 SPVWITHMP------------RKSCPFYQRPEE---------GSDACLSADLLLGPGEIL 277

Query: 493 SGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLG 552
             G R        ++ ++  +     +          +       G   GI+R +M  L 
Sbjct: 278 GAGERCEDFLSTSRSVADHEVDPSPYQ----WYLEMKRSSPLRTAGFGLGIERFIMWALD 333

Query: 553 AKNVREVSL 561
             ++R+  L
Sbjct: 334 VGDIRDCCL 342


>gi|207111581|ref|ZP_03245743.1| lysyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 43

 Score = 41.6 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 213 YFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNT 252
            F+I   FR+E       P EF  ++   ++   +D++  
Sbjct: 2   VFEINRNFRNEGMDHSHNP-EFTMIEFYWAYHTYEDLIEL 40


>gi|326333953|ref|ZP_08200183.1| DNA polymerase III, alpha subunit [Nocardioidaceae bacterium Broad-1]
 gi|325948232|gb|EGD40342.1| DNA polymerase III, alpha subunit [Nocardioidaceae bacterium Broad-1]
          Length = 1141

 Score = 41.6 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 45/121 (37%), Gaps = 14/121 (11%)

Query: 8    SCGDLGVSDVGSFVRLSGWV-HRVRP--HGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
            S GDL  S+ G  + ++G V HR RP   GG+ F+++ D  G+  VV +        A  
Sbjct: 1032 SIGDLPTSEPGRRITVAGLVTHRQRPGTAGGVTFINLEDETGMLNVVCS--------AGL 1083

Query: 65   VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
             R    + +   VM         + +T    L A ++  L             R      
Sbjct: 1084 WRKHRKIAVSTSVMLIRGILERNDGVTN---LVADRLAPLEEIHPEAAKAIASRHRSRDF 1140

Query: 125  R 125
            R
Sbjct: 1141 R 1141


>gi|298247514|ref|ZP_06971319.1| DNA polymerase III, alpha subunit [Ktedonobacter racemifer DSM 44963]
 gi|297550173|gb|EFH84039.1| DNA polymerase III, alpha subunit [Ktedonobacter racemifer DSM 44963]
          Length = 1173

 Score = 41.6 bits (96), Expect = 0.37,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 39/113 (34%), Gaps = 18/113 (15%)

Query: 6    THSCGDLGVSDVGSFVRLSGWV---HRVRPHGG--IIFLDIRDHYGITQVVANPDSACFE 60
            TH+ G +        V + G +    R+    G  +  + + D YG   +   P    +E
Sbjct: 985  THTIGQVTEELDTKKVTVGGMIKEARRITTKKGDDMCVVQLEDMYGTLGITIFP--RTYE 1042

Query: 61   IAKSVRSE-WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPL 112
              K +  E  V+ + G V  R  E            +    +E L  AEE   
Sbjct: 1043 QTKELWQEGSVVLVKGTVQVRRDEPG----------ILCDSVEPLKKAEEEMN 1085


>gi|311272129|ref|XP_003133313.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like, partial [Sus
           scrofa]
          Length = 188

 Score = 41.6 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDI-RDHYGITQVVANPDSACFEIAK 63
             DL V      V +   VH  R  G   FL + +  + +  +VA  D A  ++ K
Sbjct: 129 VSDLTVQKADEVVWVRARVHTSRAKGKQCFLVLRQQQFNVQALVAVGDHASKQMVK 184


>gi|195952407|ref|YP_002120697.1| tRNA synthetase class II (D K and N) [Hydrogenobaculum sp. Y04AAS1]
 gi|195932019|gb|ACG56719.1| tRNA synthetase class II (D K and N) [Hydrogenobaculum sp. Y04AAS1]
          Length = 300

 Score = 41.6 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 68/212 (32%), Gaps = 20/212 (9%)

Query: 147 RIINSMRCRMIAENFIECSTPILTASSPEGARDFLVP-----SRVNQGSFYALPQAPQQY 201
             I+ +R       + E  TP +          ++ P     +   +     L  +P++ 
Sbjct: 17  EFIDKIRGFYKKIGYTEVFTPYIQ--DEPNLEKYIKPVEIDITYCGKKEKAYLHTSPERS 74

Query: 202 KQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVF 261
            + L+ +     FQIA  FRDE+  S     EF  L+         +  + +  + + +F
Sbjct: 75  MKALLKTYKSNIFQIAKVFRDEECGSL-NSIEFTMLECYNV-----ENKDAINEISKLIF 128

Query: 262 EEFSNGNTVSNNFLRIC-YDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSV 320
           E F           ++  ++ A   Y          I+ +N+       +     + L  
Sbjct: 129 ELFGENIKCILTKPKLTPFEKAFEEYLGVIFSEDEDILKNNLISFGYDFDDSDTWEELID 188

Query: 321 NPGYEVWAIPAKGGGGNRAFCDRMNEWARSQG 352
                +           ++  + + ++    G
Sbjct: 189 KMMVHMQP------KLGKSQIEFLTDFPCKLG 214


>gi|212531311|ref|XP_002145812.1| L-asparaginase, putative [Penicillium marneffei ATCC 18224]
 gi|210071176|gb|EEA25265.1| L-asparaginase, putative [Penicillium marneffei ATCC 18224]
          Length = 969

 Score = 41.6 bits (96), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 39/105 (37%), Gaps = 7/105 (6%)

Query: 472 NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
            D    KA   DL+    E+   G R+  ++   +    + + +   + ++       + 
Sbjct: 872 TDSARRKARCADLLLGSGEVLGLGERHVSAD---EVRHALNLHQVADKGKYKWYTDVRES 928

Query: 532 GMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSP 576
                 G   GI+R +  +    ++R++ + P  +     +  +P
Sbjct: 929 KPLQTVGWGMGIERFLAWVFRHDDIRDLLIVPRLKG----MSFAP 969


>gi|167768921|ref|ZP_02440974.1| hypothetical protein ANACOL_00238 [Anaerotruncus colihominis DSM
           17241]
 gi|167668561|gb|EDS12691.1| hypothetical protein ANACOL_00238 [Anaerotruncus colihominis DSM
           17241]
          Length = 337

 Score = 41.6 bits (96), Expect = 0.39,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 50/155 (32%), Gaps = 14/155 (9%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHN-PFTMPQGGME------S 468
            R  +++++  +     E      +P +   E E      H   F M  G +        
Sbjct: 169 LRTELSRDVSFVTTQELEDL----YPGFSPKERENAYLKEHRTAFVMQIGDLLKSGLKHD 224

Query: 469 LKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG--GLY 526
            +  D    K    D+V     +      + M   +     +  +SK   + R G     
Sbjct: 225 GRAPDYDDWKLNG-DIVFWSDVLGCAFEVSSMGIRVDAQSMDEQLSKAGADERRGLPFHR 283

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
                 +P   G   G  R+ MLLLG  ++ EV  
Sbjct: 284 MVMDGTLPLTMGGGIGQSRLSMLLLGKAHIGEVQA 318


>gi|172053663|gb|ACB70969.1| PylS-derived acetyl-lysine-tRNA synthetase [synthetic construct]
          Length = 420

 Score = 41.6 bits (96), Expect = 0.40,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 54/153 (35%), Gaps = 29/153 (18%)

Query: 147 RIINSMRCRMIAENFIECSTPILTAS----------SPEGARDFLVPSRVNQGSFYALPQ 196
           ++   +    +   F+E  +PIL  +            E ++      RV++        
Sbjct: 211 KLERDITKFFVDRGFLEIKSPILIPAEYVERMGINNDTELSKQIF---RVDKNLCLRPMV 267

Query: 197 APQQYKQLLMASGFDR-------YFQIAPCFRDEDPRSDRLPGEFYQLDM--EMSFVEQD 247
           AP  +     A   DR        F++ PC+R ++        EF  ++     S   ++
Sbjct: 268 APTIFN---YARKLDRILPGPIKIFEVGPCYR-KESDGKEHLEEFTMVNFFQMGSGCTRE 323

Query: 248 DILNTMENVLRGV---FEEFSNGNTVSNNFLRI 277
           ++   ++  L  +   FE   +   V  + L I
Sbjct: 324 NLEALIKEFLDYLEIDFEIVGDSCMVYGDTLDI 356


>gi|207092135|ref|ZP_03239922.1| lysyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 126

 Score = 41.6 bits (96), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 6/74 (8%)

Query: 22  RLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRS 81
            + G V  +R  G   F+ + D   I Q   + +    E  KS++    L +  +V+   
Sbjct: 59  SIVGRVKLLRLMGKACFIKVEDESAILQAYVSQNELNDE-FKSLKKH--LEVGDIVL--- 112

Query: 82  AETINANIITGQIE 95
            +       TG++ 
Sbjct: 113 VKGFPFATKTGELS 126


>gi|227832328|ref|YP_002834035.1| DNA polymerase III, alpha subunit [Corynebacterium aurimucosum ATCC
            700975]
 gi|227453344|gb|ACP32097.1| DNA polymerase III, alpha subunit [Corynebacterium aurimucosum ATCC
            700975]
          Length = 1045

 Score = 41.2 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 14/99 (14%)

Query: 9    CGDLGVSDVGSFVRLSGWV-HRVRPH--GGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
              DL   + G+ VR++G V HR RP   GG++F  + D  G+  V+ +P     +   + 
Sbjct: 944  AADLPGVEDGTRVRIAGVVTHRQRPQTAGGVVFFGLEDETGLMNVMVSPGLWARDKV-TA 1002

Query: 66   RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL 104
            R+   L + G+V +           +G + ++A ++E L
Sbjct: 1003 RTAPALIVRGIVQN----------ASGAVTVAADQLEPL 1031


>gi|269862544|ref|XP_002650880.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220065476|gb|EED43177.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 310

 Score = 41.2 bits (95), Expect = 0.50,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 68/195 (34%), Gaps = 22/195 (11%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID----------FAHNPFTMPQGG 465
            RN +A E+  +     E      FP     E E  I             H   +  + G
Sbjct: 121 LRNKLADEVRFVQSQELEEL----FPELNAQERENAIAREAGSVFIIGIGHPLKSGKEHG 176

Query: 466 --MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                    DL        +++  G E++S GIR   + +  Q  +     K   E    
Sbjct: 177 QRSADYDDWDLNGDLIVWNEVIGCGMEVSSMGIRVDHTSLRRQLEAKNESRKAEYE---- 232

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL--FPMSQNFCDLLMGSPSTVSV 581
                 +  +PP  G   G  R+VM LL A+++ E+    +P          G+PS++  
Sbjct: 233 FHRGVLEGVIPPTIGGGIGKSRVVMFLLEARHIGEIQARVWPEKGLEKCAEEGNPSSLKP 292

Query: 582 EQLRELGLRIVENPK 596
             +R+  +     P+
Sbjct: 293 FGMRKRKISNPPPPR 307


>gi|262183812|ref|ZP_06043233.1| error-prone DNA polymerase [Corynebacterium aurimucosum ATCC
           700975]
          Length = 953

 Score = 41.2 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 14/99 (14%)

Query: 9   CGDLGVSDVGSFVRLSGWV-HRVRPH--GGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
             DL   + G+ VR++G V HR RP   GG++F  + D  G+  V+ +P     +   + 
Sbjct: 852 AADLPGVEDGTRVRIAGVVTHRQRPQTAGGVVFFGLEDETGLMNVMVSPGLWARDKV-TA 910

Query: 66  RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL 104
           R+   L + G+V +           +G + ++A ++E L
Sbjct: 911 RTAPALIVRGIVQN----------ASGAVTVAADQLEPL 939


>gi|240103517|ref|YP_002959826.1| recJ-like phosphoesterase, containing RNA binding S1 and OB-fold
           nucleic acid binding domain [Thermococcus gammatolerans
           EJ3]
 gi|239911071|gb|ACS33962.1| recJ-like phosphoesterase, containing RNA binding S1 and OB-fold
           nucleic acid binding domain [Thermococcus gammatolerans
           EJ3]
          Length = 804

 Score = 41.2 bits (95), Expect = 0.52,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 9/89 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
             +L     G  VR+ G V +++  GG     I D  GIT   A  ++       ++   
Sbjct: 278 IAELSKDMAGKTVRIQGRVTQIQVTGGPTVFTITDGTGITWAAA-FEAPGVRAYPNINVG 336

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELS 97
            ++ + G +   S E         QIE+S
Sbjct: 337 DIVEVIGKIAFHSGEI--------QIEVS 357


>gi|269864799|ref|XP_002651701.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220064041|gb|EED42355.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 292

 Score = 41.2 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 58/169 (34%), Gaps = 22/169 (13%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID----------FAHNPFTMPQGG 465
            RN +A E+  +     E      FP     E E  I             H   +  + G
Sbjct: 121 LRNKLADEVRFVQSQELEEL----FPELNAQERENAIAREAGSVFIIGIGHPLKSGKEHG 176

Query: 466 --MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                    DL        +++  G E++S GIR   + +  Q  +     K   E    
Sbjct: 177 QRSADYDDWDLNGDLIVWNEVIGCGMEVSSMGIRVDHTSLRRQLEAKNESRKAEYE---- 232

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE--VSLFPMSQNFCD 570
                 +  +PP  G   G  R+VM LL A+++ E   S++P   +   
Sbjct: 233 FHRGVLEGVIPPTIGGGIGKSRVVMFLLEARHIGEIQASVWPKKVHEEC 281


>gi|269864812|ref|XP_002651705.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220064032|gb|EED42351.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 287

 Score = 41.2 bits (95), Expect = 0.55,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 58/169 (34%), Gaps = 22/169 (13%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID----------FAHNPFTMPQGG 465
            RN +A E+  +     E      FP     E E  I             H   +  + G
Sbjct: 121 LRNKLADEVRFVQSQELEEL----FPELNAQERENAIAREAGSVFIIGIGHPLKSGKEHG 176

Query: 466 --MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                    DL        +++  G E++S GIR   + +  Q  +     K   E    
Sbjct: 177 QRSADYDDWDLNGDLIVWNEVIGCGMEVSSMGIRVDHTSLRRQLEAKNESRKAEYE---- 232

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE--VSLFPMSQNFCD 570
                 +  +PP  G   G  R+VM LL A+++ E   S++P   +   
Sbjct: 233 FHRGVLEGVIPPTIGGGIGKSRVVMFLLEARHIGEIQASVWPKKVHEEC 281


>gi|269863796|ref|XP_002651348.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220064691|gb|EED42708.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 175

 Score = 41.2 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 58/169 (34%), Gaps = 22/169 (13%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID----------FAHNPFTMPQGG 465
            RN +A E+  +     E      FP     E E  I             H   +  + G
Sbjct: 7   LRNKLADEVRFVQSQELEEL----FPELNAQERENAIAREAGSVFIIGIGHPLKSGKEHG 62

Query: 466 --MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                    DL        +++  G E++S GIR   + +  Q  +     K   E    
Sbjct: 63  QRSADYDDWDLNGDLIVWNEVIGCGMEVSSMGIRVDHTSLRRQLEAKNESRKAEYE---- 118

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE--VSLFPMSQNFCD 570
                 +  +PP  G   G  R+VM LL A+++ E   S++P   +   
Sbjct: 119 FHRGVLEGVIPPTIGGGIGKSRVVMFLLEARHIGEIQASVWPKKVHEEC 167


>gi|269863633|ref|XP_002651291.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|269863933|ref|XP_002651397.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|269866889|ref|XP_002652424.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220062533|gb|EED41632.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220064603|gb|EED42659.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220064797|gb|EED42765.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 171

 Score = 41.2 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 58/169 (34%), Gaps = 22/169 (13%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID----------FAHNPFTMPQGG 465
            RN +A E+  +     E      FP     E E  I             H   +  + G
Sbjct: 3   LRNKLADEVRFVQSQELEEL----FPELNAQERENAIAREAGSVFIIGIGHPLKSGKEHG 58

Query: 466 --MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                    DL        +++  G E++S GIR   + +  Q  +     K   E    
Sbjct: 59  QRSADYDDWDLNGDLIVWNEVIGCGMEVSSMGIRVDHTSLRRQLEAKNESRKAEYE---- 114

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE--VSLFPMSQNFCD 570
                 +  +PP  G   G  R+VM LL A+++ E   S++P   +   
Sbjct: 115 FHRGVLEGVIPPTIGGGIGKSRVVMFLLEARHIGEIQASVWPKKVHEEC 163


>gi|269861458|ref|XP_002650436.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|269866011|ref|XP_002652124.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220063111|gb|EED41932.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220066115|gb|EED43618.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 289

 Score = 41.2 bits (95), Expect = 0.56,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 58/169 (34%), Gaps = 22/169 (13%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID----------FAHNPFTMPQGG 465
            RN +A E+  +     E      FP     E E  I             H   +  + G
Sbjct: 121 LRNKLADEVRFVQSQELEEL----FPELNAQERENAIAREAGSVFIIGIGHPLKSGKEHG 176

Query: 466 --MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                    DL        +++  G E++S GIR   + +  Q  +     K   E    
Sbjct: 177 QRSADYDDWDLNGDLIVWNEVIGCGMEVSSMGIRVDHTSLRRQLEAKNESRKAEYE---- 232

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE--VSLFPMSQNFCD 570
                 +  +PP  G   G  R+VM LL A+++ E   S++P   +   
Sbjct: 233 FHRGVLEGVIPPTIGGGIGKSRVVMFLLEARHIGEIQASVWPKKVHEEC 281


>gi|269866435|ref|XP_002652273.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220062836|gb|EED41783.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 311

 Score = 41.2 bits (95), Expect = 0.57,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 58/169 (34%), Gaps = 22/169 (13%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID----------FAHNPFTMPQGG 465
            RN +A E+  +     E      FP     E E  I             H   +  + G
Sbjct: 143 LRNKLADEVRFVQSQELEEL----FPELNAQERENAIAREAGSVFIIGIGHPLKSGKEHG 198

Query: 466 --MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                    DL        +++  G E++S GIR   + +  Q  +     K   E    
Sbjct: 199 QRSADYDDWDLNGDLIVWNEVIGCGMEVSSMGIRVDHTSLRRQLEAKNESRKAEYE---- 254

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE--VSLFPMSQNFCD 570
                 +  +PP  G   G  R+VM LL A+++ E   S++P   +   
Sbjct: 255 FHRGVLEGVIPPTIGGGIGKSRVVMFLLEARHIGEIQASVWPKKVHEEC 303


>gi|134103090|ref|YP_001108751.1| error-prone DNA polymerase [Saccharopolyspora erythraea NRRL 2338]
 gi|291003967|ref|ZP_06561940.1| error-prone DNA polymerase [Saccharopolyspora erythraea NRRL 2338]
 gi|133915713|emb|CAM05826.1| DNA polymerase III, alpha subunit, putative [Saccharopolyspora
            erythraea NRRL 2338]
          Length = 1056

 Score = 41.2 bits (95), Expect = 0.57,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 8    SCGDLGVSDVGSFVRLSGWV-HRVRPH--GGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
            S  DL   D G  V + G V HR RP   GG+ FL++ D  G+  VV  P        K 
Sbjct: 956  SAADLSEVDNGERVLVGGAVTHRQRPATAGGVTFLNLEDETGMINVVCTPGLWARYR-KI 1014

Query: 65   VRSEWVLCIDGLVMSRSA 82
             R+   L + G +     
Sbjct: 1015 ARTSAALLVRGTIECAEG 1032


>gi|269864390|ref|XP_002651556.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220064305|gb|EED42500.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 288

 Score = 41.2 bits (95), Expect = 0.58,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 58/169 (34%), Gaps = 22/169 (13%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID----------FAHNPFTMPQGG 465
            RN +A E+  +     E      FP     E E  I             H   +  + G
Sbjct: 121 LRNKLADEVRFVQSQELEEL----FPELNAQERENAIAREAGSVFIIGIGHPLKSGKEHG 176

Query: 466 --MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                    DL        +++  G E++S GIR   + +  Q  +     K   E    
Sbjct: 177 QRSADYDDWDLNGDLIVWNEVIGCGMEVSSMGIRVDHTSLRRQLEAKNESRKAEYE---- 232

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE--VSLFPMSQNFCD 570
                 +  +PP  G   G  R+VM LL A+++ E   S++P   +   
Sbjct: 233 FHRGVLEGVIPPTIGGGIGKSRVVMFLLEARHIGEIQASVWPKKVHEEC 281


>gi|15225052|ref|NP_178977.1| unknown protein [Arabidopsis thaliana]
 gi|4558658|gb|AAD22676.1| putative Ta11-like non-LTR retroelement protein [Arabidopsis
           thaliana]
 gi|330251143|gb|AEC06237.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 284

 Score = 40.8 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 35/114 (30%), Gaps = 23/114 (20%)

Query: 137 TLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQ 196
           T  +    R R+   +  R+          P L      GA  +   SR      Y +P 
Sbjct: 159 TSTQIAYIRVRVQIGITERL------RVPAPPLNPEELAGASPYFPSSRNAAFQPYMVPS 212

Query: 197 APQQ--------------YKQLLMASGFDRYFQIAPCFR---DEDPRSDRLPGE 233
                                  + SG  R +++   FR   D + R++R  GE
Sbjct: 213 TQGGVGRHHVFPDSNINPSSGAAITSGVRRVYEVGESFRPCPDGESRNNRNIGE 266


>gi|257453752|ref|ZP_05619033.1| DNA polymerase III subunit alpha [Enhydrobacter aerosaccus SK60]
 gi|257448844|gb|EEV23806.1| DNA polymerase III subunit alpha [Enhydrobacter aerosaccus SK60]
          Length = 1189

 Score = 40.8 bits (94), Expect = 0.62,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 1/82 (1%)

Query: 1    MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFE 60
            + RY   + GDL  +  G  V  +G +  V   G    + + D  G  +V    +     
Sbjct: 979  LKRYTPKTLGDLSETSYGETVFFAGLILDVANFGNRSVITLDDGTGRIEVSCYAERFA-R 1037

Query: 61   IAKSVRSEWVLCIDGLVMSRSA 82
            +   ++ E V+ IDG +  R  
Sbjct: 1038 VKDKLKVETVVIIDGSIRERDG 1059


>gi|182415861|ref|YP_001820927.1| DNA polymerase III, alpha subunit [Opitutus terrae PB90-1]
 gi|177843075|gb|ACB77327.1| DNA polymerase III, alpha subunit [Opitutus terrae PB90-1]
          Length = 1116

 Score = 40.8 bits (94), Expect = 0.64,   Method: Composition-based stats.
 Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 14/113 (12%)

Query: 9    CGDLGVSDVGSFVRLSGWVH-RVRP--HGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
              DL +   G  V+++G V  R RP    G +F+ + D  GI  VV  PD    +   ++
Sbjct: 1015 AADLPLGRDGERVKVAGSVICRQRPGTAKGFVFVSLEDETGIANVVVYPDLF-EQRRMTI 1073

Query: 66   RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGER 118
              E  LCI G + S            G I + A+ IE L++AE         R
Sbjct: 1074 NEEPALCIVGRMQSDR----------GVIHVKAETIEALNLAELPTQTSHDFR 1116


>gi|269866022|ref|XP_002652128.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220063104|gb|EED41928.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 311

 Score = 40.8 bits (94), Expect = 0.67,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 58/169 (34%), Gaps = 22/169 (13%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID----------FAHNPFTMPQGG 465
            RN +A E+  +     E      FP     E E  I             H   +  + G
Sbjct: 143 LRNKLADEVRFVQSQELEEL----FPELNAQERENAIAREAGSVFIIGIGHPLKSGKEHG 198

Query: 466 --MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                    DL        +++  G E++S GIR   + +  Q  +     K   E    
Sbjct: 199 QRSADYDDWDLNGDLIVWNEVIGCGMEVSSMGIRVDHTSLRRQLEAKNESRKAEYE---- 254

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE--VSLFPMSQNFCD 570
                 +  +PP  G   G  R+VM LL A+++ E   S++P   +   
Sbjct: 255 FHRGVLEGVIPPTIGGGIGKSRVVMFLLEARHIGEIQASVWPKKVHEEC 303


>gi|70913480|ref|XP_731553.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56501454|emb|CAH84472.1| hypothetical protein PC301059.00.0 [Plasmodium chabaudi chabaudi]
          Length = 37

 Score = 40.8 bits (94), Expect = 0.67,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 145 RTRIINSMRCRMIAENFIECSTPILTASSPEGARDFL 181
           ++ I    R  +I  NF E  TP L   S EG  +  
Sbjct: 1   QSEICKIFRNYLIDNNFTEIHTPKLLGESSEGGANAF 37


>gi|91774018|ref|YP_566710.1| pyrolysyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|118573260|sp|Q12UB6|PYLS_METBU RecName: Full=Pyrrolysyl-tRNA synthetase; AltName:
           Full=Pyrrolysine--tRNA ligase; Short=PylRS
 gi|91713033|gb|ABE52960.1| Pyrrolysyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 416

 Score = 40.8 bits (94), Expect = 0.69,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 74/213 (34%), Gaps = 33/213 (15%)

Query: 73  IDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLD 132
           +   + + S   +   +   +++ +  +IE L         +  + E PE    +   + 
Sbjct: 128 VSNSIPTPSISVVKDEVKVPEVKYTPSQIERLKTLMSPDDKIPIQDELPEFKVLEKELIQ 187

Query: 133 LRRDTLHKNIV-----KRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLV----- 182
            RRD L K        +  ++   +    +   F+E  +PI+         +++      
Sbjct: 188 RRRDDLKKMYEEDREDRLGKLERDITEFFVDRGFLEIKSPIMIPF------EYIERMGID 241

Query: 183 --------PSRVNQGSFYALPQAPQQYKQL-----LMASGFDRYFQIAPCFRDEDPRSDR 229
                     RV++        AP  Y  L     ++     R F+I PC+R ++     
Sbjct: 242 KDDHLNKQIFRVDESMCLRPMLAPCLYNYLRKLDKVLPDPI-RIFEIGPCYR-KESDGSS 299

Query: 230 LPGEFYQLDM--EMSFVEQDDILNTMENVLRGV 260
              EF  ++     S   ++++   ++  L  +
Sbjct: 300 HLEEFTMVNFCQMGSGCTRENMEALIDEFLEHL 332


>gi|21228136|ref|NP_634058.1| hypothetical protein MM_2034 [Methanosarcina mazei Go1]
 gi|20906581|gb|AAM31730.1| conserved protein [Methanosarcina mazei Go1]
          Length = 710

 Score = 40.8 bits (94), Expect = 0.69,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 8/128 (6%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
            +  S  G  +R+ G V +V+   G     I D  G     A  +SA       +    +
Sbjct: 203 QIDTSMKGRLIRIEGEVIQVKQTSGPTIFTISDEGGFIPCAA-FESAGKRSYPHIDVGMI 261

Query: 71  LCIDGLVMSRSA----ETINANIITGQIE-LSAQKIE--ILSVAEELPLPVFGEREYPES 123
           + I G V  R      E ++  ++TG+ E +   ++E  I   A    +P   E E  E 
Sbjct: 262 VSITGEVTPRDEQVQIEVMSMKLLTGEKEAVVKTRVEKVIDEKAAPADIPFLIESEILEK 321

Query: 124 IRFKYRFL 131
           +R +   +
Sbjct: 322 LRPRMLHV 329


>gi|326665936|ref|XP_001335682.3| PREDICTED: hypothetical protein LOC795494 [Danio rerio]
          Length = 1612

 Score = 40.8 bits (94), Expect = 0.73,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 6/94 (6%)

Query: 472  NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQC 531
             D    KA   DL+    E    G R+   +++ +A  +  + ++  +          + 
Sbjct: 1516 EDSGQSKAKAADLLLGLGETVGLGERHSTPDMVREALQHHAVPEDSYKWYI-----NMRQ 1570

Query: 532  GMPP-HGGIAAGIDRIVMLLLGAKNVREVSLFPM 564
             MP    G   G +R +  LL   +VR++ + P 
Sbjct: 1571 VMPLLTSGWGMGTERYLCWLLQHNDVRDMQIIPR 1604


>gi|269863045|ref|XP_002651073.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|269863962|ref|XP_002651406.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|269864002|ref|XP_002651420.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|269865987|ref|XP_002652116.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220063127|gb|EED41940.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220064557|gb|EED42636.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220064583|gb|EED42650.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220065167|gb|EED42983.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 253

 Score = 40.8 bits (94), Expect = 0.73,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 58/169 (34%), Gaps = 22/169 (13%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID----------FAHNPFTMPQGG 465
            RN +A E+  +     E      FP     E E  I             H   +  + G
Sbjct: 85  LRNKLADEVRFVQSQELEEL----FPELNAQERENAIAREAGSVFIIGIGHPLKSGKEHG 140

Query: 466 --MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                    DL        +++  G E++S GIR   + +  Q  +     K   E    
Sbjct: 141 QRSADYDDWDLNGDLIVWNEVIGCGMEVSSMGIRVDHTSLRRQLEAKNESRKAEYE---- 196

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE--VSLFPMSQNFCD 570
                 +  +PP  G   G  R+VM LL A+++ E   S++P   +   
Sbjct: 197 FHRGVLEGVIPPTIGGGIGKSRVVMFLLEARHIGEIQASVWPKKVHEEC 245


>gi|284931564|gb|ADC31502.1| Asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 311

 Score = 40.4 bits (93), Expect = 0.81,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 43/144 (29%), Gaps = 27/144 (18%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           +IN       W+ +FP                PF     G  ++             DL+
Sbjct: 192 LINKFKNNIIWLSNFP----------WQLV--PFYQKIEGDYAINS-----------DLL 228

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
               E    G R    +    +      + +  +        +         G   G++R
Sbjct: 229 IGIGETVGSGQRCITYKETYDSILKHKNNPKHYDWYLKMKLES----ELETSGFGLGLER 284

Query: 546 IVMLLLGAKNVREVSLFPMSQNFC 569
           +V+ ++  K++R V L P   +  
Sbjct: 285 LVLFIIDEKDIRNVQLLPRETDRE 308


>gi|149183583|ref|ZP_01862004.1| lysyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848699|gb|EDL62928.1| lysyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 118

 Score = 40.4 bits (93), Expect = 0.81,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 19/49 (38%), Gaps = 10/49 (20%)

Query: 5   RTHSCGDLGV----------SDVGSFVRLSGWVHRVRPHGGIIFLDIRD 43
           R+H+  ++             +  + + ++G +   R  G   F  I+D
Sbjct: 55  RSHTSQEIKEQFDSFTKEELEEKEASITIAGRIMTKRGKGKAGFAHIQD 103


>gi|254785234|ref|YP_003072662.1| DNA polymerase III subunit alpha [Teredinibacter turnerae T7901]
 gi|237687442|gb|ACR14706.1| DNA polymerase III, alpha subunit [Teredinibacter turnerae T7901]
          Length = 1171

 Score = 40.4 bits (93), Expect = 0.84,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 14/112 (12%)

Query: 22   RLSGWVHRVRPHG-----GIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
             ++G V   R         + F+ + D  G  +V    D+   +  + +  + +L I G 
Sbjct: 1000 TVAGLVVAFRVMKTKRGDNMAFVTLDDRTGRIEVAVFSDAYS-DNREKLVKDALLVITGQ 1058

Query: 77   VMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKY 128
            V             +G +++ A +I  L+ A +  +     R   E++   Y
Sbjct: 1059 VSFDDY--------SGGLKMRADEITDLNEARQASVRAIKLRWRSEALPLDY 1102


>gi|325957677|ref|YP_004293089.1| asparagine synthetase AsnA [Lactobacillus acidophilus 30SC]
 gi|325334242|gb|ADZ08150.1| asparagine synthetase AsnA [Lactobacillus acidophilus 30SC]
          Length = 337

 Score = 40.4 bits (93), Expect = 0.87,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 46/146 (31%), Gaps = 19/146 (13%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD-------LVCNG---- 488
           +P     E E +I        + + G +  +       +A  YD       LV       
Sbjct: 188 WPELSPEEREDRIAKEEKAVFIMKIGDKLKRSGKPHDGRAPDYDDWQLNGDLVFWYEPLQ 247

Query: 489 --FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
              EI+S GIR     +  Q              +        +  +P   G   G  R+
Sbjct: 248 KKLEISSMGIRVSEESLREQLKKAH----CEERAKLPFHQMLLKGKLPYTIGGGIGQSRL 303

Query: 547 VMLLLGAKNVREVSL--FPMSQNFCD 570
            MLLLG  ++ EV    +P +     
Sbjct: 304 CMLLLGKAHIGEVQASIWPKNMVEKC 329


>gi|269862887|ref|XP_002651014.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|269864886|ref|XP_002651730.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220063983|gb|EED42326.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220065266|gb|EED43042.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 220

 Score = 40.4 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 58/169 (34%), Gaps = 22/169 (13%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID----------FAHNPFTMPQGG 465
            RN +A E+  +     E      FP     E E  I             H   +  + G
Sbjct: 52  LRNKLADEVRFVQSQELEEL----FPELNAQERENAIAREAGSVFIIGIGHPLKSGKEHG 107

Query: 466 --MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                    DL        +++  G E++S GIR   + +  Q  +     K   E    
Sbjct: 108 QRSADYDDWDLNGDLIVWNEVIGCGMEVSSMGIRVDHTSLRRQLEAKNESRKAEYE---- 163

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE--VSLFPMSQNFCD 570
                 +  +PP  G   G  R+VM LL A+++ E   S++P   +   
Sbjct: 164 FHRGVLEGVIPPTIGGGIGKSRVVMFLLEARHIGEIQASVWPKKVHEEC 212


>gi|17508959|ref|NP_491796.1| hypothetical protein T08B2.11 [Caenorhabditis elegans]
 gi|9803010|gb|AAG00018.1| Hypothetical protein T08B2.11 [Caenorhabditis elegans]
          Length = 416

 Score = 40.4 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 49/169 (28%), Gaps = 21/169 (12%)

Query: 363 LDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQ 422
            +E         +AKH      E+ + R      D    +  +  +    A   R    +
Sbjct: 152 EEEKNKQKLNKDLAKHFFKHIQESHKSRKKAD--DRRIEVMPESSQLNVSARSLRKKTQK 209

Query: 423 ------ELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLS 476
                 +L I   N  E  W+ D P  E  ++E  +             + +    D L 
Sbjct: 210 KPKTVLDLEIFKPNG-EPVWVTDKPPSECEKDEDGVIIT-------NPELAAALAEDNLE 261

Query: 477 IKAFQY-----DLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVEN 520
           +   +Y     D +            NH  + +         S+ V ++
Sbjct: 262 MDERKYLDYVEDYMSCAMPRGPALPENHQFDPLATVEKLASNSEYVTQD 310


>gi|297526562|ref|YP_003668586.1| transcriptional regulator, MarR family [Staphylothermus hellenicus
           DSM 12710]
 gi|297255478|gb|ADI31687.1| transcriptional regulator, MarR family [Staphylothermus hellenicus
           DSM 12710]
          Length = 519

 Score = 40.4 bits (93), Expect = 0.90,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 14/73 (19%)

Query: 531 CGMP--PHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPST-----VSVEQ 583
            G P         GIDR+ M +LG  ++R+  LF       D L   P+      +S  Q
Sbjct: 454 LGAPGVRAIAWGIGIDRLAMAVLGLDDIRD--LFSKD---LDFLQKLPTPILPYFISKTQ 508

Query: 584 LRELGLRIVENPK 596
             +  +R+V  PK
Sbjct: 509 ASD--VRVVSAPK 519


>gi|146304871|ref|YP_001192187.1| phenylalanyl-tRNA synthetase subunit alpha [Metallosphaera sedula
           DSM 5348]
 gi|172046956|sp|A4YIL1|SYFA_METS5 RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|145703121|gb|ABP96263.1| phenylalanyl-tRNA synthetase, alpha subunit [Metallosphaera sedula
           DSM 5348]
          Length = 465

 Score = 40.4 bits (93), Expect = 0.98,   Method: Composition-based stats.
 Identities = 12/24 (50%), Positives = 16/24 (66%)

Query: 535 PHGGIAAGIDRIVMLLLGAKNVRE 558
           P G    GIDR+ ML LG K++R+
Sbjct: 427 PAGAWGIGIDRLAMLFLGVKDIRD 450


>gi|290475172|ref|YP_003468058.1| putative Asparagine--tRNA ligase [Xenorhabdus bovienii SS-2004]
 gi|289174491|emb|CBJ81285.1| putative Asparagine--tRNA ligase [Xenorhabdus bovienii SS-2004]
          Length = 335

 Score = 40.4 bits (93), Expect = 1.00,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 37/130 (28%), Gaps = 25/130 (19%)

Query: 435 CWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASG 494
            W+  FP                PF                   +   DL+    E    
Sbjct: 223 VWLTHFP------------SLSVPFYQADAS---------EQGYSLTADLLMGIGETLGA 261

Query: 495 GIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAK 554
           G RN  +E            ++V    +    R  +       G   G++R ++ L+   
Sbjct: 262 GERNTYAE----NVVENLNVRKVSREEYEWYIRMRELMPLRTSGFGMGVERFILWLINHD 317

Query: 555 NVREVSLFPM 564
           ++R+  L P 
Sbjct: 318 DIRDCQLLPR 327


>gi|169838952|ref|ZP_02872140.1| asparaginyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7a]
          Length = 82

 Score = 40.4 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 23/69 (33%), Gaps = 2/69 (2%)

Query: 92  GQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINS 151
              E+ A KI +   A+    P+  +R   E +R     L  R +        R+ +  +
Sbjct: 9   QDYEIKATKISVYQKADSDY-PLQNKRHTFEFLR-TIAHLRPRTNAFFATFRVRSILSYA 66

Query: 152 MRCRMIAEN 160
           +        
Sbjct: 67  IHKFFRKRT 75


>gi|167567481|ref|ZP_02360397.1| hypothetical protein BoklE_33312 [Burkholderia oklahomensis EO147]
          Length = 896

 Score = 40.4 bits (93), Expect = 1.0,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 29/198 (14%)

Query: 25  GWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAET 84
           G+   VR  G + F  +R      QVV    S   E+ +S+    ++ + G+V  +    
Sbjct: 3   GYCVNVRDMGKLAFFTLRSQTSSFQVVCIAKSVIDEL-RSIDEYSLIEVTGVVQEKQRRR 61

Query: 85  INANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFKYRFLDLRRDTLHKNIVK 144
               +   ++EL+A+ +  +         +  +    + I  +            + IV+
Sbjct: 62  EQDRL---ELELNAKTLSRVGRDVFHSSRLANDSTSAQEIFKR-----------LEPIVQ 107

Query: 145 RTRIINSMRCRMIAENFIECST------PILTASSPEGARDFLVPSRVNQGSFYALPQAP 198
           + R+ ++ R  + A    E         P + A +  G        R +       P  P
Sbjct: 108 QARLTSATRKVLDAWAITEFPPPTALAFPDMQALAGLG--------RTDDSPKRYCPHPP 159

Query: 199 QQYKQLLMASGFDRYFQI 216
                 L+A+G    F  
Sbjct: 160 FHIYSRLLAAGGLYRFAF 177


>gi|315231635|ref|YP_004072071.1| Archaeal DNA polymerase II small subunit [Thermococcus barophilus
           MP]
 gi|315184663|gb|ADT84848.1| Archaeal DNA polymerase II small subunit [Thermococcus barophilus
           MP]
          Length = 677

 Score = 40.1 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 27/73 (36%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G L   +    V + G V+  R        ++ D  GI +V    D+  ++ A  V  +
Sbjct: 312 IGKLSYINPEGEVTIIGLVNSKRETKKGFIFEVEDMTGIVKVFLGRDNEDYKKAFEVLPD 371

Query: 69  WVLCIDGLVMSRS 81
            V+   G    R 
Sbjct: 372 SVVAFRGYYSKRG 384


>gi|294660339|ref|NP_853042.2| asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284811996|gb|AAP56610.2| Asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930519|gb|ADC30458.1| Asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 346

 Score = 40.1 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 43/144 (29%), Gaps = 27/144 (18%)

Query: 426 IINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLV 485
           +IN       W+ +FP                PF     G  ++             DL+
Sbjct: 227 LINKFKNNIIWLSNFP----------WQLV--PFYQKIEGDYAINS-----------DLL 263

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
               E    G R    +    +      + +  +        +         G   G++R
Sbjct: 264 IGIGETVGSGQRCITYKETYDSILKHKNNPKHYDWYLKMKLES----ELETSGFGLGLER 319

Query: 546 IVMLLLGAKNVREVSLFPMSQNFC 569
           +V+ ++  K++R V L P   +  
Sbjct: 320 LVLFIIDEKDIRNVQLLPRETDRE 343


>gi|319776955|ref|YP_004136606.1| aspartate--ammonia ligase [Mycoplasma fermentans M64]
 gi|318038030|gb|ADV34229.1| Aspartate--ammonia ligase [Mycoplasma fermentans M64]
          Length = 326

 Score = 40.1 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 18/133 (13%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--------LVC----- 486
           +P     E E K    H    + + G   L  N   S +AF YD        +V      
Sbjct: 178 YPKLSPEERETKFAKKHKAIFIYEIGYP-LADNKPQSKRAFDYDDWKLNGDLIVYDAVNK 236

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
              EI+S GIR    + +L+      +S++  ++    +        P   G   G  R+
Sbjct: 237 RALEISSMGIRV-DKDSLLKQAEFSHVSQDEFKDYHKNIINNT---FPLTIGGGIGQSRL 292

Query: 547 VMLLLGAKNVREV 559
            M LL  K++ EV
Sbjct: 293 SMFLLEKKHIGEV 305


>gi|238809738|dbj|BAH69528.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 338

 Score = 40.1 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 18/133 (13%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--------LVC----- 486
           +P     E E K    H    + + G   L  N   S +AF YD        +V      
Sbjct: 190 YPKLSPEERETKFAKKHKAIFIYEIGYP-LADNKPQSKRAFDYDDWKLNGDLIVYDAVNK 248

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
              EI+S GIR    + +L+      +S++  ++    +        P   G   G  R+
Sbjct: 249 RALEISSMGIRV-DKDSLLKQAEFSHVSQDEFKDYHKNIINNT---FPLTIGGGIGQSRL 304

Query: 547 VMLLLGAKNVREV 559
            M LL  K++ EV
Sbjct: 305 SMFLLEKKHIGEV 317


>gi|254472134|ref|ZP_05085534.1| DNA polymerase III, alpha subunit subfamily, putative [Pseudovibrio
            sp. JE062]
 gi|211958417|gb|EEA93617.1| DNA polymerase III, alpha subunit subfamily, putative [Pseudovibrio
            sp. JE062]
          Length = 1117

 Score = 40.1 bits (92), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 46/125 (36%), Gaps = 20/125 (16%)

Query: 9    CGDLGVSDVGSFVRLSGWV-HRVR--PHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
            C DL     G  V ++G V  R R     G+IF+ + D  GI  V+  P   CFE  +++
Sbjct: 958  CDDLKDLRAGRKVSVAGLVLVRQRPGSAKGVIFMTLEDESGIANVIVWPK--CFEKYRAL 1015

Query: 66   RSEW-VLCIDGLVMSRSAETINANIITGQIELSAQKIE----ILSVAEELPLPVFGEREY 120
                  + + G + S            G I + A+ +E    +L           G    
Sbjct: 1016 VLGTRFIKVTGRLQS----------AEGVIHVVAEHLEDMTDLLGQLSVAEFADAGLAHA 1065

Query: 121  PESIR 125
             E  R
Sbjct: 1066 DEVRR 1070


>gi|308189759|ref|YP_003922690.1| aspartate--ammonia ligase [Mycoplasma fermentans JER]
 gi|307624501|gb|ADN68806.1| aspartate--ammonia ligase [Mycoplasma fermentans JER]
          Length = 338

 Score = 40.1 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 18/133 (13%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--------LVC----- 486
           +P     E E K    H    + + G   L  N   S +AF YD        +V      
Sbjct: 190 YPKLSPEERETKFAKKHKAIFIYEIGYP-LADNKPQSKRAFDYDDWKLNGDLIVYDAVNK 248

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
              EI+S GIR    + +L+      +S++  ++    +        P   G   G  R+
Sbjct: 249 RALEISSMGIRV-DKDSLLKQAEFSHVSQDEFKDYHKNIINNT---FPLTIGGGIGQSRL 304

Query: 547 VMLLLGAKNVREV 559
            M LL  K++ EV
Sbjct: 305 SMFLLEKKHIGEV 317


>gi|300087544|ref|YP_003758066.1| DNA polymerase III subunit alpha [Dehalogenimonas
            lykanthroporepellens BL-DC-9]
 gi|299527277|gb|ADJ25745.1| DNA polymerase III, alpha subunit [Dehalogenimonas
            lykanthroporepellens BL-DC-9]
          Length = 1045

 Score = 40.1 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 11   DLGVSDVGSFVRLSGWV-HRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
            ++     G+ V  +G V  R RPH  ++F+ + D +G   ++  P    +   +S     
Sbjct: 950  EITAMKDGAEVTTAGLVIRRQRPHRKVVFITLEDEFGHIPLMVFP--GVYHRHESRFKAP 1007

Query: 70   VLCIDGLVMSRSA 82
             L + G +  R  
Sbjct: 1008 FLIVSGRLSRREG 1020


>gi|300779744|ref|ZP_07089600.1| DNA-directed DNA polymerase [Corynebacterium genitalium ATCC 33030]
 gi|300533854|gb|EFK54913.1| DNA-directed DNA polymerase [Corynebacterium genitalium ATCC 33030]
          Length = 1074

 Score = 40.1 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 14/99 (14%)

Query: 9    CGDLGVSDVGSFVRLSGWV-HRVRP--HGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
              DL   + G+ VR++G + HR RP   GG+ F+ + D  G+  VV        +     
Sbjct: 973  AADLMSVEDGTRVRIAGVITHRQRPVTAGGVTFMGLEDETGLMNVVIPVGLWNRQKV-LA 1031

Query: 66   RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL 104
            R+   L I G+V             TG + + A K E L
Sbjct: 1032 RTAKALIIRGIV----------ENATGAVSIIADKFEPL 1060


>gi|317125081|ref|YP_004099193.1| DNA polymerase III subunit alpha [Intrasporangium calvum DSM 43043]
 gi|315589169|gb|ADU48466.1| DNA polymerase III, alpha subunit [Intrasporangium calvum DSM 43043]
          Length = 1391

 Score = 40.1 bits (92), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 7/94 (7%)

Query: 9    CGDLGVSDVGSFVRLSG-WVHR----VRPHGGIIFLDIRDHYGITQVVANPDSACFEIAK 63
              +L     G  V ++G  V      +R    ++FL + D  G   +    D      A 
Sbjct: 1190 ADELLSGRSGREVWVAGVKVATQTPPIRSGRRVVFLTLDDATGPVDLTFFEDVQGP-YAS 1248

Query: 64   SVRSEWVLCIDGLVMSRSAETINANIITGQIELS 97
            +V   W+L   GLV     + ++    TG  ELS
Sbjct: 1249 TVFHSWLLLCRGLVRRTGPKGLSIR-ATGAWELS 1281


>gi|238611471|ref|XP_002397981.1| hypothetical protein MPER_01497 [Moniliophthora perniciosa FA553]
 gi|215473562|gb|EEB98911.1| hypothetical protein MPER_01497 [Moniliophthora perniciosa FA553]
          Length = 157

 Score = 40.1 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/148 (12%), Positives = 44/148 (29%), Gaps = 22/148 (14%)

Query: 30  VRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANI 89
           +R     I   I+   G+              A+ ++ E  + + G +   +    +  I
Sbjct: 1   LRQQLTTIQAVIQVQDGVISETFAR------WAEHLKHESFVIVSGTLSKPATPIQSTTI 54

Query: 90  ITGQIELSAQKIEIL---SVAEELPLPVFGEREYPESIRFKY-----------RFLDLRR 135
            +  IEL    + ++   + +    +      + P+     +           R +DLR 
Sbjct: 55  HS--IELHITALHLIAEPTESVPFTVYADDLSKKPDDTIPVHITDRTRMESANRIIDLRT 112

Query: 136 DTLHKNIVKRTRIINSMRCRMIAENFIE 163
                       + ++ R  +    F  
Sbjct: 113 PASQSIFRVTHTVSSAFRNHLRIAWFYR 140


>gi|88604072|ref|YP_504250.1| O-phosphoseryl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|121725412|sp|Q2FSR2|SEPS_METHJ RecName: Full=O-phosphoseryl-tRNA(Cys) synthetase; Short=SepRS;
           AltName: Full=Non-canonical O-phosphoseryl-tRNA(Cys)
           synthetase; AltName: Full=O-phosphoserine--tRNA(Cys)
           ligase; Short=O-phosphoserine--tRNA ligase
 gi|88189534|gb|ABD42531.1| phosphoserine-tRNA(Cys) ligase [Methanospirillum hungatei JF-1]
          Length = 531

 Score = 40.1 bits (92), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 65/182 (35%), Gaps = 18/182 (9%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKG-NDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           E  E+  ++   H+   +  G   +++    +       +      F       + +M +
Sbjct: 221 EQAEDSHRLMSYHSASCVVAGEYVTIEDGKAVARALLSAFGYTDFEFRPDDKRSKYYMPD 280

Query: 503 VMLQAFSNVGISKEVVENRFGGL--YRAFQCGM-PPHGGIAAGIDRIVMLLLGAKNVREV 559
              + ++       V    FG        + G+  P   +  G++R+ M++  AK+VRE+
Sbjct: 281 TQTEVYAAHPDHGWVEVATFGIYSPVALAEYGVGIPVMNLGLGVERMAMIMNKAKDVREL 340

Query: 560 SLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISVTTILRNVYGLKIIHSI 619
             FP            P   +  +L   G+ ++  P          ++R++    + HS 
Sbjct: 341 C-FPQFF---------PIRYTDTELA-AGVSLLAEP---ATTPGKNLVRSLINTAVTHST 386

Query: 620 TL 621
            +
Sbjct: 387 AI 388


>gi|326774355|ref|ZP_08233620.1| DNA polymerase III, alpha subunit [Streptomyces cf. griseus
            XylebKG-1]
 gi|326654688|gb|EGE39534.1| DNA polymerase III, alpha subunit [Streptomyces cf. griseus
            XylebKG-1]
          Length = 1147

 Score = 39.7 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 8/76 (10%)

Query: 12   LGVSDVGSFVRLSGWVHRVRP-----HGG-IIFLDIRDHYGITQVVANPDSACFEIAKSV 65
            LG    G  V ++G V           G  IIF+ + D  G+  +    DS     A +V
Sbjct: 988  LGAMHPGQRVLVAG-VRSSTQTPPIASGKRIIFVTLEDGSGLVDLAFFEDSH-ERCAHTV 1045

Query: 66   RSEWVLCIDGLVMSRS 81
                +L + G V +R 
Sbjct: 1046 FHHGMLLVRGTVEARG 1061


>gi|213649454|ref|ZP_03379507.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 33

 Score = 39.7 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
           FT P+   E    +D  S+ A  YD+VCNG EI
Sbjct: 1   FTAPKPEWEDRIESDTGSVLADAYDIVCNGHEI 33


>gi|315039203|ref|YP_004032771.1| asparagine synthetase AsnA [Lactobacillus amylovorus GRL 1112]
 gi|312277336|gb|ADQ59976.1| asparagine synthetase AsnA [Lactobacillus amylovorus GRL 1112]
          Length = 337

 Score = 39.7 bits (91), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 45/146 (30%), Gaps = 19/146 (13%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD-------LVCNG---- 488
           +P     E E +I        + + G +  +       +A  YD       LV       
Sbjct: 188 WPELSPEEREDRIAKEEKAVFIMKIGDKLKRSGKPHDGRAPDYDDWQLNGDLVFWYEPLQ 247

Query: 489 --FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
              EI+S GIR     +  Q              +        +  +P   G   G  R+
Sbjct: 248 KKLEISSMGIRVSEESLREQLKKAH----CEERAKLPFHQMLLKGELPYTIGGGIGQSRL 303

Query: 547 VMLLLGAKNVREVSL--FPMSQNFCD 570
            MLLLG  ++ EV    +P       
Sbjct: 304 CMLLLGKAHIGEVQASIWPKDMVEKC 329


>gi|327401433|ref|YP_004342272.1| phosphoesterase RecJ domain-containing protein [Archaeoglobus
           veneficus SNP6]
 gi|327316941|gb|AEA47557.1| phosphoesterase RecJ domain protein [Archaeoglobus veneficus SNP6]
          Length = 694

 Score = 39.7 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 3/77 (3%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
             +L  S  G  V + G +  +R  GG     I D  G   V A            ++ +
Sbjct: 196 IAEL-ESLAGKMVEIRGKITHIRQTGGPTIFTILDETG--SVNAAAFEGGDRAYPEIKVD 252

Query: 69  WVLCIDGLVMSRSAETI 85
            V+   G+V  R A+  
Sbjct: 253 DVVRAIGIVKKRDAKPQ 269


>gi|269866893|ref|XP_002652425.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220062530|gb|EED41631.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 280

 Score = 39.7 bits (91), Expect = 1.6,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 54/158 (34%), Gaps = 20/158 (12%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID----------FAHNPFTMPQGG 465
            RN +A E+  +     E      FP     E E  I             H   +  + G
Sbjct: 121 LRNKLADEVRFVQSQELEEL----FPELNAQERENAIAREAGSVFIIGIGHPLKSGKEHG 176

Query: 466 --MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                    DL        +++  G E++S GIR   + +  Q  +     +   E    
Sbjct: 177 QRSADYDDWDLNGDLIVWNEVIGCGMEVSSMGIRVDHTSLRRQLEAKNESRRAEYE---- 232

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
                 +  +PP  G   G  R+VM LLGA+ + E+  
Sbjct: 233 FHRGVLEGVIPPTIGGGIGKSRVVMFLLGARPIGEIQA 270


>gi|300789271|ref|YP_003769562.1| DNA polymerase III subunit alpha [Amycolatopsis mediterranei U32]
 gi|299798785|gb|ADJ49160.1| DNA polymerase III subunit alpha [Amycolatopsis mediterranei U32]
          Length = 1109

 Score = 39.7 bits (91), Expect = 1.7,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 14/103 (13%)

Query: 8    SCGDLGVSDVGSFVRLSGWV-HRVRPH--GGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
            +  +L  ++ G+ V + G V HR RP   GGI FL++ D  G+  V+ +P     +    
Sbjct: 1008 TVAELMRTEDGTRVWVGGAVTHRQRPATAGGITFLNLEDETGMANVLVSPGLWQRQRL-V 1066

Query: 65   VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVA 107
             R+   L + G V +            G + L A +IE L ++
Sbjct: 1067 ARTSAALLVRGQVQA----------AEGVVTLVADRIENLDLS 1099


>gi|154495775|ref|ZP_02034471.1| hypothetical protein BACCAP_00054 [Bacteroides capillosus ATCC
           29799]
 gi|150274973|gb|EDN02021.1| hypothetical protein BACCAP_00054 [Bacteroides capillosus ATCC
           29799]
          Length = 337

 Score = 39.3 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 47/135 (34%), Gaps = 18/135 (13%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--------LVCNG--- 488
           +P     E E       +P T   G   +LK       +A  YD        L+ N    
Sbjct: 189 WPDLTPKEREDAW-VKDHPTTFLMGIGGALKSGKPHDGRAPDYDDWSLNGDILLWNPVLE 247

Query: 489 --FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
             FEI+S GIR    E + +      I+               +  +P   G   G  R+
Sbjct: 248 RAFEISSMGIRVS-PESLDKQL---TIAGCDDRRNLPFHKMLLEGKLPLTIGGGIGQSRL 303

Query: 547 VMLLLGAKNVREVSL 561
            MLLLG  ++ EV  
Sbjct: 304 CMLLLGKAHIGEVQA 318


>gi|302384060|ref|YP_003819883.1| DNA polymerase III subunit alpha [Brevundimonas subvibrioides ATCC
            15264]
 gi|302194688|gb|ADL02260.1| DNA polymerase III, alpha subunit [Brevundimonas subvibrioides ATCC
            15264]
          Length = 1126

 Score = 39.3 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 5/84 (5%)

Query: 5    RTHSCGDLGVSDVGSFVRLSG--WVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIA 62
            R  +C +      GS VR++G   V +    G  IF+ + D  G++ VV    +  FE  
Sbjct: 985  RVVTCAETLARRGGSTVRVAGVVLVRQRPGKGNAIFVTLEDETGVSNVVLW--ARMFEQY 1042

Query: 63   -KSVRSEWVLCIDGLVMSRSAETI 85
             + V    ++ ++G+V       +
Sbjct: 1043 RREVMGARLMEVEGVVEKSPEGVV 1066


>gi|269861697|ref|XP_002650541.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220065981|gb|EED43513.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 171

 Score = 39.3 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 58/168 (34%), Gaps = 22/168 (13%)

Query: 417 RNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID----------FAHNPFTMPQGG- 465
           RN +A E+  +     E      FP     E E  I             H   +  + G 
Sbjct: 4   RNKLADEVRFVQSQELEEL----FPELNAQERENAIAREAGSVFIIGIGHPLKSGKEHGQ 59

Query: 466 -MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG 524
                   DL        +++  G E++S GIR   + +  Q  +     K   E     
Sbjct: 60  RSADYDDWDLNGDLIVWNEVIGCGMEVSSMGIRVDHTSLRRQLEAKNESRKAEYE----F 115

Query: 525 LYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE--VSLFPMSQNFCD 570
                +  +PP  G   G  R+VM LL A+++ E   S++P   +   
Sbjct: 116 HRGVLEGVIPPTIGGGIGKSRVVMFLLEARHIGEIQASVWPKKVHEEC 163


>gi|227893930|ref|ZP_04011735.1| asparagine synthetase AsnA [Lactobacillus ultunensis DSM 16047]
 gi|227864234|gb|EEJ71655.1| asparagine synthetase AsnA [Lactobacillus ultunensis DSM 16047]
          Length = 337

 Score = 39.3 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 48/144 (33%), Gaps = 15/144 (10%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD-------LVCNGFEIA 492
           +P     E E KI        + + G +  +       +A  YD       L+     + 
Sbjct: 188 WPDLSPEERENKIAKEEKAVFIMKIGDKLKRSGKPHDGRAPDYDDWQLNGDLIFWYEPLQ 247

Query: 493 S----GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           S      +   +SE  L+        +E  +  F  +    +  +P   G   G  R+ M
Sbjct: 248 SKLEISSMGIRVSEESLREQLKKAHCEERAKLPFHQML--LKGELPYTIGGGIGQSRLCM 305

Query: 549 LLLGAKNVREVSL--FPMSQNFCD 570
           LLLG  ++ EV    +P       
Sbjct: 306 LLLGKAHIGEVQASIWPKDMVKKC 329


>gi|259417661|ref|ZP_05741580.1| phenylalanyl-tRNA synthetase, alpha subunit [Silicibacter sp.
           TrichCH4B]
 gi|259346567|gb|EEW58381.1| phenylalanyl-tRNA synthetase, alpha subunit [Silicibacter sp.
           TrichCH4B]
          Length = 357

 Score = 39.3 bits (90), Expect = 1.9,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 25/116 (21%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E +E E +   +H PFT P   ++     D   +K  + D   +  EI   G+     
Sbjct: 238 FFEVDEVELRFRASHFPFTEPSAEVDIRCSWDNGQLKIGEGD---DWMEILGSGM----- 289

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            V  +  +  GI       ++ G                 GIDR+ ML  G  ++R
Sbjct: 290 -VHPKVIAAGGIDP----EKYQGFA------------FGIGIDRLAMLKYGIPDLR 328


>gi|300022283|ref|YP_003754894.1| DNA polymerase III subunit alpha [Hyphomicrobium denitrificans ATCC
            51888]
 gi|299524104|gb|ADJ22573.1| DNA polymerase III, alpha subunit [Hyphomicrobium denitrificans ATCC
            51888]
          Length = 1115

 Score = 39.3 bits (90), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 11/128 (8%)

Query: 8    SCGDLGVSDVGSFVRLSG--WVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
            SC +L     GS+ R++G   V +    G  IF+ + D  GIT  V    +   +    V
Sbjct: 980  SCAELAAQRDGSWGRVAGVVLVRQRPGKGNAIFITLEDETGITNAVLWARTF-EKFRNEV 1038

Query: 66   RSEWVLCIDGLVMSRSAETIN---ANIITGQIELS----AQKIEI-LSVAEELPLPVFGE 117
                +L I+G V       I+     I+    ELS    A    I LS A+E   P    
Sbjct: 1039 MGGRLLLIEGKVQRSPENVIHLMATRIVDRTPELSRLADAYSPTITLSNADEFLHPQASR 1098

Query: 118  REYPESIR 125
              +P ++R
Sbjct: 1099 VRHPRNVR 1106


>gi|221112048|ref|XP_002167843.1| PREDICTED: similar to asparaginase like 1 [Hydra magnipapillata]
          Length = 1204

 Score = 39.3 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 56/205 (27%), Gaps = 37/205 (18%)

Query: 366  SGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGDPLKFCSFAADARNHIAQELG 425
            +G+++ +  +                     D    I  D   F     + R    ++L 
Sbjct: 1023 AGSISHINTILVTFEKEGKFPRIEL------DDAIDIMKDFHDFYELVVNGRPEFGRKL- 1075

Query: 426  IINCNCF------EFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479
                  F         W+              +D    PF            ++    KA
Sbjct: 1076 TRKGEQFLIQKFKGPVWLT------------HMDHLGVPFYQG--------YSNAEKTKA 1115

Query: 480  FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGI 539
               DL+    E    G R+       +A ++  I K      +       +       G 
Sbjct: 1116 KAADLLIGLGETLGLGERHETCIQAEEALAHHRIEK----EDYNWYLNMRRIKPLLTSGW 1171

Query: 540  AAGIDRIVMLLLGAKNVREVSLFPM 564
              G +R +  +L   +VR++ + P 
Sbjct: 1172 GMGTERFLCWILQNDDVRDMQILPR 1196


>gi|14590254|ref|NP_142320.1| hypothetical protein PH0340 [Pyrococcus horikoshii OT3]
 gi|3256731|dbj|BAA29414.1| 740aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 740

 Score = 39.3 bits (90), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            GDL     G  V++ G V +V+  GG     + D  GIT   A  ++       +V   
Sbjct: 215 IGDLREELAGKTVKVRGKVTQVQVTGGPTVFTLTDGTGITWAAA-FEAPGVRAYPNVNIG 273

Query: 69  WVLCIDGLVMSRSA 82
            V+ + G V   + 
Sbjct: 274 DVVEVIGKVSFHAG 287


>gi|312137398|ref|YP_004004735.1| DNA polymerase ii small subunit [Methanothermus fervidus DSM 2088]
 gi|311225117|gb|ADP77973.1| DNA polymerase II small subunit [Methanothermus fervidus DSM 2088]
          Length = 470

 Score = 39.3 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 7/119 (5%)

Query: 12  LGVSDVGS-FVRLSGWVHRVRPHGGII-FLDIRDHYGITQVVANPDSACFEIAKSVRSEW 69
           + + D+G   V+++G V+ VR        +++ D  G   V  N D   F+  +++  + 
Sbjct: 120 VDIKDIGDNEVKIAGIVNEVRTTKKNHKIIELEDKTGKCIVFVNKDGDLFKKTENIVQDE 179

Query: 70  VLCIDGLVMSR---SAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
           V+ + G    R   ++E I   I   +IE       IL +++             E + 
Sbjct: 180 VIGVIGKKNGRFVTASEIIQPGIP--RIEEKNSNCTILFLSDLHIGSSKFLENSFEKLI 236


>gi|82619122|gb|ABB85284.1| lysyl-tRNA-synthetase [Lymnaea stagnalis]
          Length = 115

 Score = 39.3 bits (90), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 5/54 (9%)

Query: 1  MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG-GIIFLDIRDHYGITQVVAN 53
          + R+     GD+    +   V ++G +H  R  G  +IF D+R      QV+AN
Sbjct: 44 IERFNHIESGDI----LNEEVTVAGRIHAKRLSGAKLIFYDLRGESVKIQVMAN 93


>gi|327184324|gb|AEA32771.1| asparagine synthetase AsnA [Lactobacillus amylovorus GRL 1118]
          Length = 337

 Score = 38.9 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 45/146 (30%), Gaps = 19/146 (13%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD-------LVCNG---- 488
           +P     E E KI        + + G +  +       +A  YD       LV       
Sbjct: 188 WPELSPEEREDKIAKEEKAVFIMKIGDKLKRSGKPHDGRAPDYDDWQLNGDLVFWYEPLQ 247

Query: 489 --FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
              EI+S GIR     +  Q              +        +  +P   G   G  R+
Sbjct: 248 KKLEISSMGIRVSEESLREQLKKAH----CEERAKLPFHQMLLKGELPYTIGGGIGQSRL 303

Query: 547 VMLLLGAKNVREVSL--FPMSQNFCD 570
            MLLLG  ++ EV    +P       
Sbjct: 304 CMLLLGKAHIGEVQASIWPKDMVEKC 329


>gi|104774114|ref|YP_619094.1| asparagine synthetase AsnA [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116241259|sp|P54264|ASNA_LACDA RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|103423195|emb|CAI97996.1| Aspartate-ammonia ligase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 338

 Score = 38.9 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 45/136 (33%), Gaps = 19/136 (13%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--------LVC----- 486
           +P    +E E KI        +   G           ++A  YD        L       
Sbjct: 189 WPSLTPSEREDKICQEKGAVFLEHIGGALPLSKKPHDLRAPDYDDWTLNGDLLFWYEPLQ 248

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG-MPPHGGIAAGIDR 545
             FE++S  IR     +  Q        +  +       ++A   G +P   G   G  R
Sbjct: 249 RAFEVSSMSIRVDEDRLQEQLKLAGAEDRLDLP-----FHQALLKGDLPYSIGGGIGQSR 303

Query: 546 IVMLLLGAKNVREVSL 561
           + MLLLG  ++ EV  
Sbjct: 304 LCMLLLGKAHIGEVQA 319


>gi|20089795|ref|NP_615870.1| hypothetical protein MA0917 [Methanosarcina acetivorans C2A]
 gi|19914737|gb|AAM04350.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 714

 Score = 38.9 bits (89), Expect = 2.4,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 68/192 (35%), Gaps = 9/192 (4%)

Query: 11  DLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWV 70
           ++  S  G  +R+ G V +V+   G     I D  G     A  +SA       +    +
Sbjct: 207 EIDTSMKGRLIRIEGEVIQVKQTSGPTIFTISDEGGFIPCAA-FESAGKRSYPHIDVGMI 265

Query: 71  LCIDGLVMSRSA----ETINANIITGQIELSAQ-KIEILSVAEELPLPVFGEREYPESIR 125
           + I G V  R      E ++  ++TG+ E + + ++E +   +  P  +    E     R
Sbjct: 266 VSITGEVTPRDEQVQIEVMSMKLLTGEKEAAVKFRVEKVIEEKAAPADIPFLVESAIMER 325

Query: 126 FKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECS---TPILTASSPEGARDFLV 182
            K R L + ++           I+          + I       P++T      A  +  
Sbjct: 326 LKPRMLHVAKEIKKAIFHSTPIILRHHADADGITSAIAIERAILPLITEIGGADAEYYFY 385

Query: 183 PSRVNQGSFYAL 194
               ++  FY L
Sbjct: 386 KRAPSKAPFYEL 397


>gi|126465169|ref|YP_001040278.1| phenylalanyl-tRNA synthetase subunit alpha [Staphylothermus marinus
           F1]
 gi|126013992|gb|ABN69370.1| phenylalanyl-tRNA synthetase, alpha subunit [Staphylothermus
           marinus F1]
          Length = 519

 Score = 38.9 bits (89), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 5/41 (12%)

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTV 579
              GIDR+ M +LG  ++R+  LF       D L   P+ +
Sbjct: 464 WGIGIDRLAMAVLGLDDIRD--LFSKD---LDFLQKLPTPI 499


>gi|224827306|ref|ZP_03700398.1| DNA polymerase III, alpha subunit [Lutiella nitroferrum 2002]
 gi|224600481|gb|EEG06672.1| DNA polymerase III, alpha subunit [Lutiella nitroferrum 2002]
          Length = 1147

 Score = 38.9 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 13/93 (13%)

Query: 23   LSGWVHRVRPH----GGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGLVM 78
            ++G+V  +R      G + F+ + D     +V    +S     AK +R + VL I+G V 
Sbjct: 987  IAGFVTGLRTKVGNRGKMAFIQLDDGSAKREVSVFSESFDANRAK-LREDTVLVIEGKV- 1044

Query: 79   SRSAETINANIITGQIELSAQKIEILSVAEELP 111
              S ++ N     G + + A KI  L  A    
Sbjct: 1045 --SEDSFN-----GGLRIIADKIYELGEARSRY 1070


>gi|18976390|ref|NP_577747.1| DNA polymerase II small subunit [Pyrococcus furiosus DSM 3638]
 gi|13431467|sp|P81412|DP2S_PYRFU RecName: Full=DNA polymerase II small subunit; Short=Pol II;
           AltName: Full=DP1
 gi|2967436|dbj|BAA25163.1| DNA polymerase II subunit 1 [Pyrococcus furiosus DSM 3638]
 gi|18891915|gb|AAL80142.1| DNA polymerase II subunit 1 [Pyrococcus furiosus DSM 3638]
          Length = 613

 Score = 38.9 bits (89), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 26/73 (35%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            G L        V + G V+  R     +  +I D  G  +V    DS  +  A  V  +
Sbjct: 249 IGKLKYVKEDETVTIIGLVNSKREVNKGLIFEIEDLTGKVKVFLPKDSEDYREAFKVLPD 308

Query: 69  WVLCIDGLVMSRS 81
            V+   G+   R 
Sbjct: 309 AVVAFKGVYSKRG 321


>gi|269866159|ref|XP_002652176.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220063015|gb|EED41880.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 275

 Score = 38.9 bits (89), Expect = 2.7,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 52/153 (33%), Gaps = 20/153 (13%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID----------FAHNPFTMPQGG 465
            RN +A E+  +     E      FP     E E  I             H   +  + G
Sbjct: 121 LRNKLADEVRFVQSQELEEL----FPELNAQERENAIAREAGSVFIIGIGHPLKSGKEHG 176

Query: 466 --MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                    DL        +++  G E++S GIR   + +  Q  +     K   E    
Sbjct: 177 QRSADYDDWDLNGDLIVWNEVIGCGMEVSSMGIRVDHTSLRRQLEAKNESRKAEYE---- 232

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                 +  +PP  G   G  R+VM LL A+++
Sbjct: 233 FHRGVLEGVIPPTIGGGIGKSRVVMFLLEARHI 265


>gi|256825424|ref|YP_003149384.1| DNA polymerase III subunit alpha [Kytococcus sedentarius DSM 20547]
 gi|256688817|gb|ACV06619.1| DNA polymerase III, alpha subunit [Kytococcus sedentarius DSM 20547]
          Length = 1260

 Score = 38.9 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 11   DLGVSDVGSFVRLSG-WVHR----VRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
            D+     G+ V ++G  V      VR    ++F+ + D  G +      D      A  +
Sbjct: 1070 DVRTMRSGAEVLVAGVRVATQTPPVRSGRRVVFVTLNDPTGASDATFFEDVQGP-YATVL 1128

Query: 66   RSEWVLCIDGLVMSRSAETINANIITGQIELS 97
               W L + G V+ R+     +   TG  ELS
Sbjct: 1129 FQSWFLLVRG-VVRRTGPRGVSLRATGAWELS 1159


>gi|94971073|ref|YP_593121.1| DNA polymerase III, alpha subunit [Candidatus Koribacter versatilis
            Ellin345]
 gi|94553123|gb|ABF43047.1| error-prone DNA polymerase, DnaE-like protein [Candidatus Koribacter
            versatilis Ellin345]
          Length = 1070

 Score = 38.9 bits (89), Expect = 2.8,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 14/118 (11%)

Query: 3    RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPHG---GIIFLDIRDHYGITQVVANPDSACF 59
            + R  S   L V++ G  VR++G V   +  G   G +FL I D  GI   + +P     
Sbjct: 964  KMRVLSAEQLQVAEDGRQVRIAGCVIARQRPGTAKGFVFLSIEDETGIANAIISP----- 1018

Query: 60   EIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGE 117
            ++ +  R   V+      +    +  N +   G I + AQ+++ L + +         
Sbjct: 1019 QLYEQNR---VVVFTERFLVVEGKLQNQD---GVIHVRAQRVQSLHLNQVAAPSHDFH 1070


>gi|320011646|gb|ADW06496.1| DNA polymerase III, alpha subunit [Streptomyces flavogriseus ATCC
            33331]
          Length = 1161

 Score = 38.9 bits (89), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 6/75 (8%)

Query: 12   LGVSDVGSFVRLSG-WVHR----VRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            L  +  G  V ++G  V      VR    +IF  + D  G+  +    DS     A +V 
Sbjct: 999  LREARHGETVLVAGAKVATQTPPVRSGRRVIFTTLDDGTGLVDLAFFDDSHA-ACAHTVF 1057

Query: 67   SEWVLCIDGLVMSRS 81
              W+L + G+V  R 
Sbjct: 1058 HSWLLLVRGVVQRRG 1072


>gi|254476960|ref|ZP_05090346.1| DNA polymerase III, alpha subunit subfamily, putative [Ruegeria sp.
            R11]
 gi|214031203|gb|EEB72038.1| DNA polymerase III, alpha subunit subfamily, putative [Ruegeria sp.
            R11]
          Length = 1123

 Score = 38.9 bits (89), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 10/126 (7%)

Query: 1    MHRYRTHSCGDLGVSDVGSFVRLSGWVHRVRPH----GGIIFLDIRDHYGITQVVANPDS 56
            +H  R H   DL  S  G  V L+G V  VR       G+ F+ + D  G+  +V  P  
Sbjct: 971  LHAQRFHRAQDLKGSHHGQRVSLAGLVL-VRQKPGSAKGVCFITLEDETGVANLVIWPK- 1028

Query: 57   ACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS-VAEELPLPVF 115
              F + ++      L +    +    + I  +++  ++E +  ++E LS  A        
Sbjct: 1029 -LFTLFRATIMSARLLVVHGRVQTDGKVI--HVVADRLEDATDRLERLSTTALPPTTTRG 1085

Query: 116  GEREYP 121
                +P
Sbjct: 1086 DHPTHP 1091


>gi|227878464|ref|ZP_03996404.1| aspartate--ammonia ligase [Lactobacillus crispatus JV-V01]
 gi|256843920|ref|ZP_05549407.1| aspartate-ammonia ligase [Lactobacillus crispatus 125-2-CHN]
 gi|256849517|ref|ZP_05554949.1| aspartate-ammonia ligase [Lactobacillus crispatus MV-1A-US]
 gi|262046186|ref|ZP_06019149.1| aspartate-ammonia ligase [Lactobacillus crispatus MV-3A-US]
 gi|293381379|ref|ZP_06627380.1| aspartate--ammonia ligase [Lactobacillus crispatus 214-1]
 gi|312984003|ref|ZP_07791352.1| aspartate--ammonia ligase [Lactobacillus crispatus CTV-05]
 gi|227861993|gb|EEJ69572.1| aspartate--ammonia ligase [Lactobacillus crispatus JV-V01]
 gi|256613825|gb|EEU19027.1| aspartate-ammonia ligase [Lactobacillus crispatus 125-2-CHN]
 gi|256713633|gb|EEU28622.1| aspartate-ammonia ligase [Lactobacillus crispatus MV-1A-US]
 gi|260573516|gb|EEX30073.1| aspartate-ammonia ligase [Lactobacillus crispatus MV-3A-US]
 gi|290922069|gb|EFD99070.1| aspartate--ammonia ligase [Lactobacillus crispatus 214-1]
 gi|310894680|gb|EFQ43753.1| aspartate--ammonia ligase [Lactobacillus crispatus CTV-05]
          Length = 337

 Score = 38.5 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 65/232 (28%), Gaps = 25/232 (10%)

Query: 349 RSQGQP---GLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIRVRLDMQDGDSCFFIAGD 405
           +  G     GL      +    ++     +            +   +    +        
Sbjct: 93  KRYGFGMHEGLYTNMNAIRRDEDLDNFHSIYVDQWDWEKIISKQERNTDTLEVTVMNIFK 152

Query: 406 PLKFCSFAADARN-----HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFT 460
            +K       AR       +A  +  I     E  W    P     E E KI        
Sbjct: 153 AIKATEKLVAARYPGSTYRLADHVSFITTQELEDRW----PDLSPEEREDKIAKEEKAVF 208

Query: 461 MPQGGMESLKGNDLLSIKAFQYD-------LVCNGFEIAS----GGIRNHMSEVMLQAFS 509
           + + G +  +  +    +A  YD       LV     + S      +   +SE  L+   
Sbjct: 209 IMKIGDKLKRSGEPHDGRAPDYDDWQLNGDLVFWYEPLNSKIEISSMGIRVSEESLR--E 266

Query: 510 NVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
            +  +      +        +  +P   G   G  R+ MLLLG  ++ EV  
Sbjct: 267 QLKKAHCEEREKLPFHQMLLKGELPYSIGGGIGQSRLCMLLLGKAHIGEVQA 318


>gi|99082351|ref|YP_614505.1| phenylalanyl-tRNA synthetase, alpha subunit [Ruegeria sp. TM1040]
 gi|123077467|sp|Q1GDM3|SYFA_SILST RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|99038631|gb|ABF65243.1| phenylalanyl-tRNA synthetase, alpha subunit [Ruegeria sp. TM1040]
          Length = 357

 Score = 38.5 bits (88), Expect = 3.1,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 25/116 (21%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E +E E +   +H PFT P   ++     D   +K  + D   +  EI   G+     
Sbjct: 238 FFEVDEVELRFRASHFPFTEPSAEVDIRCSWDNGQLKIGEGD---DWLEILGSGM----- 289

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            V  +  +  GI       ++ G                 GIDR+ ML  G  ++R
Sbjct: 290 -VHPKVIAAGGIDP----EKYQGFA------------FGIGIDRLAMLKYGIPDLR 328


>gi|169838953|ref|ZP_02872141.1| asparaginyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7a]
          Length = 75

 Score = 38.5 bits (88), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 7/67 (10%)

Query: 162 IECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQL-------LMASGFDRYF 214
           +   TPI+T S  EGA +    + ++  +          +KQ        L  SG     
Sbjct: 1   MYVQTPIITGSDAEGAGEMFRLTTLDINNVPRTENGSIDFKQDFFGKEANLTVSGQLNVE 60

Query: 215 QIAPCFR 221
             A  F+
Sbjct: 61  TFATAFK 67


>gi|149919879|ref|ZP_01908355.1| DNA polymerase III, alpha subunit [Plesiocystis pacifica SIR-1]
 gi|149819326|gb|EDM78759.1| DNA polymerase III, alpha subunit [Plesiocystis pacifica SIR-1]
          Length = 1255

 Score = 38.5 bits (88), Expect = 3.3,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 52/144 (36%), Gaps = 16/144 (11%)

Query: 3    RYRTHSCGDLGVSDVGSFVRLSGWVHRVRPH-----GGIIFLDIRDHYGITQVVANPDSA 57
            R+ +   G+L     G  V L G +  +R         + F  + D +G  +V+  P + 
Sbjct: 1056 RHASVRIGELRKELAGQEVVLGGVITEMRQVTTKAGKTMGFFQLEDQFGRVEVIVFPRTW 1115

Query: 58   CFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIEL------SAQKIEILSVAEELP 111
               I      E        +M+   + +    +TG++E+         + +IL    E  
Sbjct: 1116 ATPI--DPDEESAPSWGDWLMAHGEDPV---FVTGKLEVEQNDMGEVSRYKILLAKVEPI 1170

Query: 112  LPVFGEREYPESIRFKYRFLDLRR 135
              V   R     +R +   LD RR
Sbjct: 1171 AKVREARTKKVRLRLRAEQLDDRR 1194


>gi|332796272|ref|YP_004457772.1| phenylalanyl-tRNA synthetase subunit alpha [Acidianus hospitalis
           W1]
 gi|332694007|gb|AEE93474.1| phenylalanyl-tRNA synthetase, alpha subunit [Acidianus hospitalis
           W1]
          Length = 468

 Score = 38.5 bits (88), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 533 MPPHGGIAAGIDRIVMLLLGAKNVR 557
             P G    G+DR+ ML LG K++R
Sbjct: 427 TMPAGAWGLGLDRLAMLFLGIKDIR 451


>gi|325125874|gb|ADY85204.1| Aspartate--ammonia ligase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 338

 Score = 38.5 bits (88), Expect = 3.4,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 46/136 (33%), Gaps = 19/136 (13%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--------LVC----- 486
           +P    +E E KI        +   G           ++A  YD        L       
Sbjct: 189 WPSLTPSEREDKICQEKGAVFLEHIGGALPLSKKPHDLRAPDYDDWTLNGDLLFWYEPLQ 248

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG-MPPHGGIAAGIDR 545
             FE++S GIR     +  Q        +  +       ++A   G +P   G   G  R
Sbjct: 249 RAFEVSSMGIRVDEDRLQEQLKLASAEDRLDLP-----FHQALLKGDLPYSIGGGIGQSR 303

Query: 546 IVMLLLGAKNVREVSL 561
           + MLLLG  ++ EV  
Sbjct: 304 LCMLLLGKAHIGEVQA 319


>gi|73670910|ref|YP_306925.1| hypothetical protein Mbar_A3472 [Methanosarcina barkeri str.
           Fusaro]
 gi|72398072|gb|AAZ72345.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 710

 Score = 38.5 bits (88), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 54/147 (36%), Gaps = 17/147 (11%)

Query: 1   MHRYRT---------HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVV 51
           + +Y T          +  ++  S  G  +R+ G V +V+   G     I D  G     
Sbjct: 184 IKKYETVELEKELPLKNSAEIDSSMKGKLLRIEGEVIQVKQTSGPTIFTISDEGGFVPCA 243

Query: 52  ANPDSACFEIAKSVRSEWVLCIDGLVMSRSA----ETINANIITGQIELSAQ---KIEIL 104
           A  +SA       +    ++ I G V  R      E ++  ++TG+ E   +   +  I 
Sbjct: 244 A-FESAGKRSYPHIDVGMIVSITGEVTLRDDQIQIEVMSMKLLTGEKEAVVKGRVERVID 302

Query: 105 SVAEELPLPVFGEREYPESIRFKYRFL 131
             A    +P   + E  E ++ +   +
Sbjct: 303 EKASPADIPFLVQSEIMEKLKPRMLHV 329


>gi|254387354|ref|ZP_05002606.1| DNA polymerase III alpha subunit [Streptomyces sp. Mg1]
 gi|194346151|gb|EDX27117.1| DNA polymerase III alpha subunit [Streptomyces sp. Mg1]
          Length = 936

 Score = 38.5 bits (88), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 6/75 (8%)

Query: 12  LGVSDVGSFVRLSGWVHR-----VRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
           L  ++ G  V ++G         +R    +IF  + D  G+  +    DS     A +V 
Sbjct: 774 LRETEHGQTVLVAGAKAATQTPPIRSGRRVIFTTLDDGTGLVDLAFFDDSH-EACAHTVF 832

Query: 67  SEWVLCIDGLVMSRS 81
             ++L + G+V  R 
Sbjct: 833 HSFLLLVRGVVQRRG 847


>gi|85716686|ref|ZP_01047655.1| DNA polymerase III subunit alpha [Nitrobacter sp. Nb-311A]
 gi|85696526|gb|EAQ34415.1| DNA polymerase III subunit alpha [Nitrobacter sp. Nb-311A]
          Length = 1167

 Score = 38.5 bits (88), Expect = 3.6,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 58/144 (40%), Gaps = 20/144 (13%)

Query: 3    RYRTHSCGDLGVSDVGSFVRLSGWVHRVR----PHGGIIFLDIRDHYGITQVVANPDSAC 58
            R R  SC ++  ++ G  V+ +G V  VR       G++F+ + D  GI  +V  P    
Sbjct: 1014 RERVASCAEVCHANDGRRVKCAG-VVLVRQRPGSANGVVFMTLEDETGIANIVVWP-KIM 1071

Query: 59   FEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS------------V 106
                K V    ++ ++G++ S   + +  +++ G++   + ++  L+             
Sbjct: 1072 ERYRKEVMGARLIEVEGVIQSSPEQVV--HLVAGKLTDRSSELMHLANDALVSRPPLQPP 1129

Query: 107  AEELPLPVFGEREYPESIRFKYRF 130
            A          R++P     + R 
Sbjct: 1130 AAPAEPLNDDHRDHPAHSAQRVRH 1153


>gi|116514185|ref|YP_813091.1| asparagine synthetase AsnA [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122275083|sp|Q04A69|ASNA_LACDB RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|116093500|gb|ABJ58653.1| aspartate-ammonia ligase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 338

 Score = 38.5 bits (88), Expect = 3.6,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 46/136 (33%), Gaps = 19/136 (13%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--------LVC----- 486
           +P    +E E KI        +   G           ++A  YD        L       
Sbjct: 189 WPSLTPSEREDKICQEKGAVFLEHIGGALPLSKKPHDLRAPDYDDWTLNGDLLFWYEPLQ 248

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG-MPPHGGIAAGIDR 545
             FE++S GIR     +  Q        +  +       ++A   G +P   G   G  R
Sbjct: 249 RAFEVSSMGIRVDEDRLQEQLKLAGAEDRLDLP-----FHQALLKGDLPYSIGGGIGQSR 303

Query: 546 IVMLLLGAKNVREVSL 561
           + MLLLG  ++ EV  
Sbjct: 304 LCMLLLGKAHIGEVQA 319


>gi|329964249|ref|ZP_08301350.1| glycosyl hydrolase family 20, catalytic domain protein [Bacteroides
           fluxus YIT 12057]
 gi|328525554|gb|EGF52597.1| glycosyl hydrolase family 20, catalytic domain protein [Bacteroides
           fluxus YIT 12057]
          Length = 653

 Score = 38.5 bits (88), Expect = 3.7,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 58/190 (30%), Gaps = 13/190 (6%)

Query: 177 ARDFLVPSRVNQ---GSFYALPQAPQQYKQLLMASGFDRYFQ--IAPCFRDEDPRSDRLP 231
            R F+    +        Y      Q +      +GF +YFQ   +  +      SD  P
Sbjct: 166 GRKFIPLHFLQDYVKIMAYYKMNTLQIHLND---NGFKQYFQHDWSKTYAAFRLESDTYP 222

Query: 232 GEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKP 291
           G     D   +  E  D+    EN    +  E  +    +  F     +   R YG D  
Sbjct: 223 G-LAAEDGHYTKAEFIDLQKLAENRFVEIIPEI-DAPAHTLAFTHYKPEIGSREYGMDHL 280

Query: 292 DLRNP---IIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWA 348
           DL  P     M  + + ++  +  VF          E            RAF D    + 
Sbjct: 281 DLFKPETYAFMDGLFKEYLEGDEPVFRGKKVHIGTDEYSNKKKDVVEKFRAFTDHYIRYV 340

Query: 349 RSQGQPGLAY 358
            S G+    +
Sbjct: 341 ESFGKQACVW 350


>gi|313123829|ref|YP_004034088.1| aspartate--ammonia ligase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280392|gb|ADQ61111.1| Aspartate--ammonia ligase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|325686095|gb|EGD28147.1| aspartate-ammonia ligase [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 338

 Score = 38.5 bits (88), Expect = 3.8,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 46/136 (33%), Gaps = 19/136 (13%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--------LVC----- 486
           +P    +E E KI        +   G           ++A  YD        L       
Sbjct: 189 WPSLTPSEREDKICQEKGAVFLEHIGGALPLSKKPHDLRAPDYDDWTLNGDLLFWYEPLQ 248

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG-MPPHGGIAAGIDR 545
             FE++S GIR     +  Q        +  +       ++A   G +P   G   G  R
Sbjct: 249 RAFEVSSMGIRVDEDRLQEQLKLAGAEDRLDLP-----FHQALLKGDLPYSIGGGIGQSR 303

Query: 546 IVMLLLGAKNVREVSL 561
           + MLLLG  ++ EV  
Sbjct: 304 LCMLLLGKAHIGEVQA 319


>gi|313114347|ref|ZP_07799880.1| aspartate--ammonia ligase [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310623341|gb|EFQ06763.1| aspartate--ammonia ligase [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 337

 Score = 38.5 bits (88), Expect = 3.8,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 49/136 (36%), Gaps = 20/136 (14%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--------LVCNG--- 488
           +P     E E      H   T        LK       +A  YD        L  N    
Sbjct: 189 YPDLTPKERENAFVKEHG-TTFLMKIGAPLKSGKPHDGRAPDYDDWDLNGDLLFWNDPLQ 247

Query: 489 --FEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCG-MPPHGGIAAGIDR 545
             +E++S GIR    E M +  +  G      + R    ++A   G +P   G   G  R
Sbjct: 248 CSYELSSMGIRVS-PESMDKQLTMAGCD----DRRALPFHKAVLNGELPYSIGGGIGQSR 302

Query: 546 IVMLLLGAKNVREVSL 561
           + MLLLG+ ++ EV  
Sbjct: 303 LCMLLLGSAHIGEVQA 318


>gi|332977932|gb|EGK14678.1| hypothetical protein HMPREF9373_0689 [Psychrobacter sp. 1501(2011)]
          Length = 495

 Score = 38.1 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 69/192 (35%), Gaps = 10/192 (5%)

Query: 161 FIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGF------DRYF 214
           F E + P++  + P G     V           L +   QY   L +S        DR  
Sbjct: 67  FGEENNPLIVLTGPGGVGKTTVVRNFLNTQLKKLQKNSDQYVLFLDSSSLLDQLKSDRVS 126

Query: 215 QIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNF 274
            I   ++ E   ++    E ++L ++        IL+ ++ ++ G+  +F   + + N F
Sbjct: 127 TIYDLYKAEISDTEYFTEELFKLSIDNG--SFIIILDGLDEIISGISVKFQLQDFLKNIF 184

Query: 275 LRICYDDAIRRYGTDKPDLRNPIIMHNVTE--HFVHSEFRVFSKILSVNPGYEVWAIPAK 332
              C++ A  +      D       + ++E  +      + F+K  +       +    +
Sbjct: 185 EDYCFNLAKTKIIITCRDYIWDEAFNLISEDFYIEKINIKPFNKEQAEKFFKSCFKDDIR 244

Query: 333 GGGGNRAFCDRM 344
               + +  D++
Sbjct: 245 LQKKSMSLVDKL 256


>gi|58338140|ref|YP_194725.1| asparagine synthetase AsnA [Lactobacillus acidophilus NCFM]
 gi|227902679|ref|ZP_04020484.1| aspartate--ammonia ligase [Lactobacillus acidophilus ATCC 4796]
 gi|75507531|sp|Q5FHY0|ASNA_LACAC RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|58255457|gb|AAV43694.1| aspartate-ammonia ligase [Lactobacillus acidophilus NCFM]
 gi|227869585|gb|EEJ77006.1| aspartate--ammonia ligase [Lactobacillus acidophilus ATCC 4796]
          Length = 336

 Score = 38.1 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 39/131 (29%), Gaps = 9/131 (6%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD-LVCNGFEIASGGIRN 498
           +P     E E KI        + + G +  +       +A  YD    NG  I       
Sbjct: 187 WPELSPEERENKIAKEEKAVFIMKIGDKLKRSGKPHDGRAPDYDDWQLNGDLIFWYEPLQ 246

Query: 499 HMSEV--------MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
              EV               +  +      +        +  +P   G   G  R+ MLL
Sbjct: 247 SKIEVSSMGIRVSEESLREQLKKAHCEDREKLPFHKMLLEGKLPYTIGGGIGQSRLCMLL 306

Query: 551 LGAKNVREVSL 561
           LG  ++ EV  
Sbjct: 307 LGKAHIGEVQA 317


>gi|6563392|gb|AAF17279.1| putative asparaginyl-tRNA synthetase [Lactococcus lactis]
          Length = 75

 Score = 38.1 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 19/51 (37%)

Query: 14 VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
             VG  V++  WV      G + FL +RD     Q V    +   +  + 
Sbjct: 11 KDHVGETVKIGAWVADKSGKGKLQFLQLRDGTAFFQAVVFKPNMIEKFGEE 61


>gi|299137470|ref|ZP_07030652.1| DNA polymerase III, alpha subunit [Acidobacterium sp. MP5ACTX8]
 gi|298600875|gb|EFI57031.1| DNA polymerase III, alpha subunit [Acidobacterium sp. MP5ACTX8]
          Length = 1072

 Score = 38.1 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 16/118 (13%)

Query: 5    RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG---GIIFLDIRDHYGITQVVANPDSACFEI 61
            R  S  +L V   G FVR +G V   +  G   G IFL + D  GI  V+  PD    + 
Sbjct: 968  RILSAQELKVYKDGEFVRTAGCVIARQRPGTAKGFIFLSMEDETGIANVIVTPDLYEHDR 1027

Query: 62   AKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGERE 119
                RS++ L ++G++ ++               +  + I + ++++        +  
Sbjct: 1028 LVVTRSKF-LLVEGVLQNQDGV------------IHVKAIRLTALSDHALQVQSHDFH 1072


>gi|295693797|ref|YP_003602407.1| aspartate--ammonia ligase [Lactobacillus crispatus ST1]
 gi|295031903|emb|CBL51382.1| Aspartate--ammonia ligase [Lactobacillus crispatus ST1]
          Length = 337

 Score = 38.1 bits (87), Expect = 4.1,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 40/131 (30%), Gaps = 9/131 (6%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD-LVCNGFEIASGGIRN 498
           +P     E E KI        + + G +  +  +    +A  YD    NG  I       
Sbjct: 188 WPDLSPEEREDKIAKEEKAVFIMKIGDKLKRSGEPHDGRAPDYDDWQLNGDLIFWYEPLQ 247

Query: 499 HMSEV--------MLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLL 550
              E+               +  +      +        +  +P   G   G  R+ MLL
Sbjct: 248 SKLEISSMGIRVSEESLREQLKKAHCEDREKLPFHQMLLKGELPYTIGGGIGQSRLCMLL 307

Query: 551 LGAKNVREVSL 561
           LG  ++ EV  
Sbjct: 308 LGKAHIGEVQA 318


>gi|157111534|ref|XP_001651607.1| eukaryotic translation initiation factor 2-alpha kinase [Aedes
            aegypti]
 gi|108883781|gb|EAT48006.1| eukaryotic translation initiation factor 2-alpha kinase [Aedes
            aegypti]
          Length = 1534

 Score = 38.1 bits (87), Expect = 4.3,   Method: Composition-based stats.
 Identities = 52/285 (18%), Positives = 99/285 (34%), Gaps = 27/285 (9%)

Query: 69   WVLCIDGLVMSRSAETINANIITGQIELSAQKI-----EILSVAEELPLPVF----GERE 119
            W+L  D      + E +++ ++   I L A +I      +LS  +             +E
Sbjct: 861  WLLNHDPGKRPTAEELLSSELVP-PIRLEAGEIQDVVRHVLSNPQSRHYKHLIARCFAQE 919

Query: 120  YPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARD 179
                    Y  LD+       + VK     + +         IE  TP+LT  +   AR+
Sbjct: 920  SDTICELSY-HLDMVPIIPRFDYVK-----SKIIELFRKHGAIEVVTPLLTPYTKTNARN 973

Query: 180  FLVPSRVNQGSFYALPQA---PQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
              V    + GS  +LP     P      L    F R + I   +R++    +  P + Y+
Sbjct: 974  NSVKLMTHSGSIVSLPDDLRIPFLRHVALNGIKFIRRYSIGRVYREKKVF-NFHPKQVYE 1032

Query: 237  LDMEMSFVEQDDIL--NTMENVLRGVFEEFSNGNTVSNNFLRICYD---DAIRRYGTDKP 291
               ++    + +++    + ++   +  E +  +   N F RI +     +I  Y    P
Sbjct: 1033 CAFDVVTPNRGNLIVDAELLSIANEIMRELNLLDPSRNVFFRINHISLLRSILLYCNVPP 1092

Query: 292  DLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGG 336
            D      +  +   F  ++   F  I SV+       +    G  
Sbjct: 1093 DKYK--ELFEIVLDFFDAKISKFQLIASVSSQITQPGVKVNTGYL 1135


>gi|255532292|ref|YP_003092664.1| DNA polymerase III subunit alpha [Pedobacter heparinus DSM 2366]
 gi|255345276|gb|ACU04602.1| DNA polymerase III, alpha subunit [Pedobacter heparinus DSM 2366]
          Length = 1045

 Score = 38.1 bits (87), Expect = 4.3,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 13/107 (12%)

Query: 5    RTHSCGDLGVSDVGSFVRLSGWVHRVRPHG---GIIFLDIRDHYGITQVVANPDSACFEI 61
            R  S  ++  +  G FV+++G +   +  G   GI F+ I D  G   +V       F+ 
Sbjct: 928  RVLSAQEITEAKDGDFVKVAGLILVRQRPGTASGICFITIEDESGTVNLVV--FQKLFDH 985

Query: 62   A-KSVRSEWVLCIDGLVMSRSA-------ETINANIITGQIELSAQK 100
              K +    ++ ++G +               N N + G + ++A +
Sbjct: 986  YRKEILQSKLIMVEGQLQKEGEVIHVVLKRCFNFNKLLGNLTVTATE 1032


>gi|126738866|ref|ZP_01754562.1| phenylalanyl-tRNA synthetase, alpha subunit [Roseobacter sp.
           SK209-2-6]
 gi|126720047|gb|EBA16754.1| phenylalanyl-tRNA synthetase, alpha subunit [Roseobacter sp.
           SK209-2-6]
          Length = 357

 Score = 38.1 bits (87), Expect = 4.3,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 25/116 (21%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E ++ E +   +H PFT P   ++     D   +K  + D   +  EI   G+     
Sbjct: 238 FFEVDDVELRFRASHFPFTEPSAEVDIRCSWDNGQLKIGEGD---DWMEILGSGM----- 289

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            V  +  +  GI  EV +  F                   GIDR+ ML  G  ++R
Sbjct: 290 -VHPKVIAAGGIDPEVYQ-GFAF---------------GIGIDRLAMLKYGIPDLR 328


>gi|325831978|ref|ZP_08165075.1| ATP phosphoribosyltransferase [Eggerthella sp. HGA1]
 gi|325486299|gb|EGC88751.1| ATP phosphoribosyltransferase [Eggerthella sp. HGA1]
          Length = 581

 Score = 38.1 bits (87), Expect = 4.4,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 45/139 (32%), Gaps = 19/139 (13%)

Query: 120 YPESIRFKYRFLDLR-----RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
             E+++ + R +D       RD L      R RI   ++    A  ++   TP L     
Sbjct: 17  TGETMQRRKRTMDYVTPAGFRDVLSDEACMRERIARDVQACFAARGYLPIETPTLEVMDV 76

Query: 175 --EGARDFLVPSRVNQ--GSFYALPQAPQQYKQLLMASGFD--------RYFQIAPCFRD 222
              G R    P +     G   A+          + A+           RY Q    FR+
Sbjct: 77  MRAGGRMPGSPFKFFDASGDLLAMRPDVTLQVARMCATRLAGQPGPFRFRYMQ--RVFRE 134

Query: 223 EDPRSDRLPGEFYQLDMEM 241
            + R      E  Q+ +E 
Sbjct: 135 AEGRMQAQAREMTQIGVEC 153


>gi|224024152|ref|ZP_03642518.1| hypothetical protein BACCOPRO_00874 [Bacteroides coprophilus DSM
           18228]
 gi|224017374|gb|EEF75386.1| hypothetical protein BACCOPRO_00874 [Bacteroides coprophilus DSM
           18228]
          Length = 346

 Score = 38.1 bits (87), Expect = 4.8,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 13/122 (10%)

Query: 464 GGMESLKGNDLLSIKA-FQYDLVC------NGFEIASGGIRNHMSEVMLQAFSNVGISKE 516
              +     D  +  A    DL+          E++S GIR +   ++ Q    + ++ +
Sbjct: 227 PDYDDWSTIDPKTGLAGLNGDLLVWNDVLDRAMELSSMGIRVNKEAMLKQ----LELTGK 282

Query: 517 VVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE--VSLFPMSQNFCDLLMG 574
               +     R  +  +P   G   G  R+ ML L   ++ E   S++P         + 
Sbjct: 283 EEREKLYFHRRLLEGSLPLSIGGGIGQSRLCMLYLKKAHIGEIQASIWPEDMRQECSRLN 342

Query: 575 SP 576
            P
Sbjct: 343 MP 344


>gi|238853515|ref|ZP_04643891.1| aspartate--ammonia ligase [Lactobacillus gasseri 202-4]
 gi|238833873|gb|EEQ26134.1| aspartate--ammonia ligase [Lactobacillus gasseri 202-4]
          Length = 336

 Score = 38.1 bits (87), Expect = 4.8,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 48/135 (35%), Gaps = 17/135 (12%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--------LVC----- 486
           +P    +E E KI        + + G +  +       +A  YD        L       
Sbjct: 187 WPDLTPDEREDKIAKEKKAVFLMKIGDKLKRSGKPHDGRAPDYDDWQLNGDLLFWYEPLQ 246

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
              EI+S GIR   SE  L+       ++E     F  +    +   P   G   G  R+
Sbjct: 247 RKLEISSMGIRV--SEESLKTQLKKAHAEERAALPFHKMLLNGEL--PYTIGGGIGQSRL 302

Query: 547 VMLLLGAKNVREVSL 561
            MLLLG  ++ EV  
Sbjct: 303 CMLLLGKAHIGEVQA 317


>gi|257051802|ref|YP_003129635.1| phosphoesterase RecJ domain protein [Halorhabdus utahensis DSM
           12940]
 gi|256690565|gb|ACV10902.1| phosphoesterase RecJ domain protein [Halorhabdus utahensis DSM
           12940]
          Length = 641

 Score = 38.1 bits (87), Expect = 5.0,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 11/89 (12%)

Query: 14  VSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCI 73
             ++G  VRL+G V +++  GG     +RD   +    A  D+        V  E ++ I
Sbjct: 121 SDNIGESVRLAGEVVQIKQTGGPTVFHVRDGESVVPCAAFEDA-GVRAYPDVDIEDLVQI 179

Query: 74  DGLVMSRSAETINANIITGQIELSAQKIE 102
            G V  R           G I++  + +E
Sbjct: 180 RGRVEER----------NGGIQIEVESLE 198


>gi|222100452|ref|YP_002535020.1| Histidyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572842|gb|ACM23654.1| Histidyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 385

 Score = 38.1 bits (87), Expect = 5.0,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 54/147 (36%), Gaps = 9/147 (6%)

Query: 212 RYFQIAPCFRDEDPRSDR----LPGEFYQLDMEMSFVEQDDILNTMENVLR--GVFEEFS 265
           RY+ I P FR E P+S R        F     E    + + IL   +N L+  G+ +   
Sbjct: 68  RYYYIGPMFRYEKPQSGRLRQFHQVGFEIFGSESPGADLETILAV-DNFLKRLGLTKYTI 126

Query: 266 NGNTVSNNFLRICYDDAIR-RYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGY 324
           + N++     R  Y +A+R  YG    DL +       T      + ++  ++    P  
Sbjct: 127 HLNSIGCPECRKNYREALREYYGKHLNDLCDDCKRRYETNILRLLDCKIDHELALNAPKS 186

Query: 325 EVWAIPAKGGGGNRAFCDRMNEWARSQ 351
             + +            D +NE+    
Sbjct: 187 TDY-LCEPCREHYEKLKDYLNEFEIKY 212


>gi|145590652|ref|YP_001152654.1| phenylalanyl-tRNA synthetase subunit alpha [Pyrobaculum arsenaticum
           DSM 13514]
 gi|166226917|sp|A4WHY5|SYFA_PYRAR RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|145282420|gb|ABP50002.1| phenylalanyl-tRNA synthetase, alpha subunit [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 488

 Score = 38.1 bits (87), Expect = 5.0,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMSQN 567
              G+DRI M+LLG  ++RE  LF     
Sbjct: 437 WGWGLDRIAMILLGIDDIRE--LFTKDPE 463


>gi|14521821|ref|NP_127297.1| hypothetical protein PAB1284 [Pyrococcus abyssi GE5]
 gi|5459041|emb|CAB50527.1| recJ-like phosphoesterase, containing RNA binding S1 and OB-fold
           nucleic acid binding domain [Pyrococcus abyssi GE5]
          Length = 740

 Score = 38.1 bits (87), Expect = 5.0,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            GDL     G  VR+ G V +V+  GG     + D  GIT   A  ++       ++   
Sbjct: 215 IGDLKEELAGKTVRVRGKVTQVQVTGGPTVFTLTDGTGITWAAA-FEAPGVRAYPNINIG 273

Query: 69  WVLCIDGLVMSRSA 82
            V+ + G V   + 
Sbjct: 274 DVVEVIGKVSFHAG 287


>gi|269867138|ref|XP_002652500.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220062360|gb|EED41556.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 222

 Score = 38.1 bits (87), Expect = 5.0,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 52/153 (33%), Gaps = 20/153 (13%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID----------FAHNPFTMPQGG 465
            RN +A E+  +     E      FP     E E  I             H   +  + G
Sbjct: 52  LRNKLADEVRFVQSQELEEL----FPELNAQERENAIAREAGSVFIIGIGHPLKSGKEHG 107

Query: 466 --MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                    DL        +++  G E++S GIR   + +  Q  +     K   E    
Sbjct: 108 QRSADYDDWDLNGDLIVWNEVIGCGMEVSSMGIRVDHTSLRRQLEAKNESRKAEYE---- 163

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNV 556
                 +  +PP  G   G  R+VM LL A+++
Sbjct: 164 FHRGVLEGVIPPTIGGGIGKSRVVMFLLXARHI 196


>gi|269866788|ref|XP_002652392.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220062602|gb|EED41664.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 157

 Score = 37.7 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 6/106 (5%)

Query: 467 ESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLY 526
                 DL        +++  G E++S GIR   + +  Q  +     K   E       
Sbjct: 48  ADYDDWDLNGDLIVWNEVIGCGMEVSSMGIRVDHTSLRRQLEAKNESRKAEYE----FHR 103

Query: 527 RAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE--VSLFPMSQNFCD 570
              +  +PP  G   G  R+VM LL A+++ E   S++P   +   
Sbjct: 104 GVLEGVIPPTIGGGIGKSRVVMFLLEARHIGEIQASVWPKKVHEEC 149


>gi|227889249|ref|ZP_04007054.1| aspartate--ammonia ligase [Lactobacillus johnsonii ATCC 33200]
 gi|227850051|gb|EEJ60137.1| aspartate--ammonia ligase [Lactobacillus johnsonii ATCC 33200]
          Length = 336

 Score = 37.7 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 41/135 (30%), Gaps = 17/135 (12%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--------LVC----- 486
           +P     E E KI        + + G    +       +A  YD        L       
Sbjct: 187 WPDLGPEEREDKIAKEKKAVFLMKIGDRLKRSGKPHDGRAPDYDDWQLNGDLLFWYEPLQ 246

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
              EI+S GIR     +  Q             +         +  +P   G   G  R+
Sbjct: 247 RKIEISSMGIRVSEESLKEQLKKAHT----EERSELPFHKMLLEGKLPYTIGGGIGQSRL 302

Query: 547 VMLLLGAKNVREVSL 561
            MLLLG  ++ EV  
Sbjct: 303 CMLLLGKAHIGEVQA 317


>gi|302550406|ref|ZP_07302748.1| DNA polymerase subunit III [Streptomyces viridochromogenes DSM 40736]
 gi|302468024|gb|EFL31117.1| DNA polymerase subunit III [Streptomyces viridochromogenes DSM 40736]
          Length = 1173

 Score = 37.7 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 6/75 (8%)

Query: 12   LGVSDVGSFVRLSGWVHR-----VRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVR 66
            L  +  G  V ++G         +R    +IF  + D  G+  +    DS     A +V 
Sbjct: 978  LREARHGETVLVAGAKAATQTPPIRSGKRVIFSTLDDGTGLVDLAFFDDSH-DACAHTVF 1036

Query: 67   SEWVLCIDGLVMSRS 81
              W+L + G+V  R 
Sbjct: 1037 HSWLLLVRGVVQRRG 1051


>gi|332158595|ref|YP_004423874.1| hypothetical protein PNA2_0954 [Pyrococcus sp. NA2]
 gi|331034058|gb|AEC51870.1| hypothetical protein PNA2_0954 [Pyrococcus sp. NA2]
          Length = 740

 Score = 37.7 bits (86), Expect = 5.3,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 1/74 (1%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            GDL     G  V++ G V +V+  GG     + D  GIT   A  ++       ++   
Sbjct: 215 IGDLKEELAGKTVKVRGKVTQVQVTGGPTVFTLTDGTGITWAAA-FEAPGVRAYPNINIG 273

Query: 69  WVLCIDGLVMSRSA 82
            V+ + G V   + 
Sbjct: 274 DVVEVIGKVSFHAG 287


>gi|116630339|ref|YP_815606.1| asparagine synthetase AsnA [Lactobacillus gasseri ATCC 33323]
 gi|116095921|gb|ABJ61073.1| aspartate-ammonia ligase [Lactobacillus gasseri ATCC 33323]
          Length = 353

 Score = 37.7 bits (86), Expect = 5.4,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 48/135 (35%), Gaps = 17/135 (12%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--------LVC----- 486
           +P    +E E KI        + + G +  +       +A  YD        L       
Sbjct: 204 WPDLTPDEREDKIAKEKKAVFLMKIGDKLKRSGKPHDGRAPDYDDWQLNGDLLFWYEPLQ 263

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
              EI+S GIR   SE  L+       ++E     F  +    +   P   G   G  R+
Sbjct: 264 RKLEISSMGIRV--SEESLKTQLKKAHAEERAALPFHKMLLNGEL--PYTIGGGIGQSRL 319

Query: 547 VMLLLGAKNVREVSL 561
            MLLLG  ++ EV  
Sbjct: 320 CMLLLGKAHIGEVQA 334


>gi|300362848|ref|ZP_07059018.1| aspartate--ammonia ligase [Lactobacillus gasseri JV-V03]
 gi|300352898|gb|EFJ68776.1| aspartate--ammonia ligase [Lactobacillus gasseri JV-V03]
          Length = 353

 Score = 37.7 bits (86), Expect = 5.5,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 47/135 (34%), Gaps = 17/135 (12%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--------LVC----- 486
           +P    +E E KI        + + G +  +       +A  YD        L       
Sbjct: 204 WPDLTPDEREDKIAKEKKAVFLMKIGDKLKRSGKPHDGRAPDYDDWQLNGDLLFWYEPLQ 263

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
              EI+S GIR   SE  L+        +E     F  +    +   P   G   G  R+
Sbjct: 264 RKLEISSMGIRV--SEESLKTQLKKAHVEERAALPFHKMLLNGEL--PYTIGGGIGQSRL 319

Query: 547 VMLLLGAKNVREVSL 561
            MLLLG  ++ EV  
Sbjct: 320 CMLLLGKAHIGEVQA 334


>gi|311110050|ref|ZP_07711447.1| aspartate--ammonia ligase [Lactobacillus gasseri MV-22]
 gi|311065204|gb|EFQ45544.1| aspartate--ammonia ligase [Lactobacillus gasseri MV-22]
          Length = 353

 Score = 37.7 bits (86), Expect = 5.6,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 48/135 (35%), Gaps = 17/135 (12%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--------LVC----- 486
           +P    +E E KI        + + G +  +       +A  YD        L       
Sbjct: 204 WPDLTPDEREDKIAKEKKAVFLMKIGDKLKRSGKPHDGRAPDYDDWQLNGDLLFWYEPLQ 263

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
              EI+S GIR   SE  L+       ++E     F  +    +   P   G   G  R+
Sbjct: 264 RKLEISSMGIRV--SEESLKTQLKKAHAEERAALPFHKMLLNGEL--PYTIGGGIGQSRL 319

Query: 547 VMLLLGAKNVREVSL 561
            MLLLG  ++ EV  
Sbjct: 320 CMLLLGKAHIGEVQA 334


>gi|268320178|ref|YP_003293834.1| asparagine synthetase AsnA [Lactobacillus johnsonii FI9785]
 gi|262398553|emb|CAX67567.1| asparagine synthetase AsnA [Lactobacillus johnsonii FI9785]
          Length = 336

 Score = 37.7 bits (86), Expect = 5.7,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 41/135 (30%), Gaps = 17/135 (12%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--------LVC----- 486
           +P     E E KI        + + G    +       +A  YD        L       
Sbjct: 187 WPDLGPEEREDKIAKEKKAVFLMKIGDRLKRSGKPHDGRAPDYDDWQLNGDLLFWYKPLQ 246

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
              EI+S GIR     +  Q             +         +  +P   G   G  R+
Sbjct: 247 RKIEISSMGIRVSEESLKEQLKKAHT----EERSELPFHKMLLEGKLPYTIGGGIGQSRL 302

Query: 547 VMLLLGAKNVREVSL 561
            MLLLG  ++ EV  
Sbjct: 303 CMLLLGKAHIGEVQA 317


>gi|225016913|ref|ZP_03706105.1| hypothetical protein CLOSTMETH_00826 [Clostridium methylpentosum
           DSM 5476]
 gi|224950307|gb|EEG31516.1| hypothetical protein CLOSTMETH_00826 [Clostridium methylpentosum
           DSM 5476]
          Length = 335

 Score = 37.7 bits (86), Expect = 6.0,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 45/134 (33%), Gaps = 20/134 (14%)

Query: 440 FPFYEWNEEEKKIDFAHN-PFTMPQGGMESLKGNDLLSIKAFQYD-------------LV 485
           +P     E E +    H   F M  G +  LK  +    +A  YD             L+
Sbjct: 187 YPSLSPKERENEYLKVHKTAFIMQIGDL--LKSGEKHDGRAPDYDDWKLNGDIVFWNELL 244

Query: 486 CNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDR 545
              FE++S GIR     +  Q        +                 +P   G   G  R
Sbjct: 245 GRAFEVSSMGIRVDAKSLDEQLTKADCDDRRE----LPFHKMVLDGTLPLTMGGGIGQSR 300

Query: 546 IVMLLLGAKNVREV 559
           I MLLLG  ++ EV
Sbjct: 301 ICMLLLGKAHIGEV 314


>gi|124485362|ref|YP_001029978.1| O-phosphoseryl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|223635775|sp|A2SQV5|SEPS_METLZ RecName: Full=O-phosphoseryl-tRNA(Cys) synthetase; Short=SepRS;
           AltName: Full=Non-canonical O-phosphoseryl-tRNA(Cys)
           synthetase; AltName: Full=O-phosphoserine--tRNA(Cys)
           ligase; Short=O-phosphoserine--tRNA ligase
 gi|124362903|gb|ABN06711.1| phosphoserine-tRNA(Cys) ligase [Methanocorpusculum labreanum Z]
          Length = 526

 Score = 37.7 bits (86), Expect = 6.2,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 53/135 (39%), Gaps = 7/135 (5%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKG-NDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           E  E+   +   H+   +  G   +++    +       +      F+      + +M E
Sbjct: 221 EQEEDATHLRTYHSASCIVAGEDVTVEEGKAVAEGLLSAFGFTEFRFQPDEKRSKYYMPE 280

Query: 503 VMLQAFSNVGISKEVVENRFGGLYRAF--QCGM-PPHGGIAAGIDRIVMLLLGAKNVREV 559
              + +    +   V    FG    A   + G+  P   +  G++R+ M+L  A++VR++
Sbjct: 281 TQTEVYGKHPVHGWVEVATFGIYSPAALAEYGVGVPVMNLGMGVERLAMVLTQAEDVRKL 340

Query: 560 S---LFPMSQNFCDL 571
           S   L+P   +  DL
Sbjct: 341 SFAQLYPPVYSDTDL 355


>gi|126459409|ref|YP_001055687.1| phenylalanyl-tRNA synthetase subunit alpha [Pyrobaculum
           calidifontis JCM 11548]
 gi|166226918|sp|A3MUA4|SYFA_PYRCJ RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|126249130|gb|ABO08221.1| phenylalanyl-tRNA synthetase, alpha subunit [Pyrobaculum
           calidifontis JCM 11548]
          Length = 488

 Score = 37.7 bits (86), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMS 565
              G+DR+ M+LLG  ++R+  LF   
Sbjct: 437 WGWGLDRVAMILLGIDDIRD--LFTKD 461


>gi|283780088|ref|YP_003370843.1| DNA polymerase III subunit alpha [Pirellula staleyi DSM 6068]
 gi|283438541|gb|ADB16983.1| DNA polymerase III, alpha subunit [Pirellula staleyi DSM 6068]
          Length = 1192

 Score = 37.7 bits (86), Expect = 6.3,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 11/93 (11%)

Query: 4    YRTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGI----------IFLDIRDHYGITQVVAN 53
            YR+H+  D+G     S V L G V  ++               +  D+ D  G  + +  
Sbjct: 985  YRSHTTADIGPIPDRSEVILGGMVSAIKLSNTKNPKPGAPSRYVMFDLEDTEGTIRCILW 1044

Query: 54   PDSACFEIAKSVRSEWVLCIDGLVMSRSAETIN 86
            PD    E+ + V+ + +L + G +  R  E  N
Sbjct: 1045 PDGYA-EMGQMVQPDAILMVRGAIDRRGGEEAN 1076


>gi|268323450|emb|CBH37038.1| putative O-phosphoseryl-tRNA synthetase [uncultured archaeon]
 gi|268324084|emb|CBH37672.1| putative phenylalanyl-tRNA synthetase, alpha chain [uncultured
           archaeon]
 gi|268326401|emb|CBH39989.1| putative O-phosphoseryl-tRNA(Cys) synthetase [uncultured archaeon]
          Length = 527

 Score = 37.7 bits (86), Expect = 6.4,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 15/170 (8%)

Query: 444 EWNEEEKKIDFAHNPFTMPQGGMESLKG-NDLLSIKAFQYDLVCNGFEIASGGIRNHMSE 502
           E  E+E ++   H+   +      S+    DL +    Q+  V   F+      + +M E
Sbjct: 223 EQREDEIRLRNYHSASCVFCSEDVSIDDGKDLATGLLLQFGFVKMRFQKDEKRSKYYMPE 282

Query: 503 VMLQAFSNVGISKEVVENRFGGLY-RAF-QCGMP-PHGGIAAGIDRIVMLLLGAKNVREV 559
              + F        V    FG     A  Q  +P P   +  G++R+ M+L  A+++R  
Sbjct: 283 TQTEVFCYHPRIGWVEVATFGIYSPTALAQYEIPYPVVNLGLGVERLAMILHDAQDMR-A 341

Query: 560 SLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISV-TTILR 608
             +P           +P  +S  ++  + +R+ E P       +  +I+R
Sbjct: 342 LAYPQ--------FYAPWELSDMEIAAM-IRLAETPSTAEGAEIAKSIVR 382


>gi|257456490|ref|ZP_05621686.1| histidyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257446150|gb|EEV21197.1| histidyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 438

 Score = 37.7 bits (86), Expect = 6.4,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 25/146 (17%)

Query: 135 RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILT-------ASSPEGARDFLVPS--- 184
           RD L ++ ++R  +I ++        F+   TP L         S+ E  +     +   
Sbjct: 11  RDFLPRDEIRRALLIETVTNVFRNAGFVPIDTPALEYSEVLLRKSNGETEKQVFRFNDNG 70

Query: 185 ------RVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRL----PGEF 234
                 R +    +A   A + Y +L     F R + IA  +R E P++ R       +F
Sbjct: 71  GRDIALRFDLTVPFARFIA-EHYSELYFP--FKR-YHIAKVWRGEKPQAGRYREFIQCDF 126

Query: 235 YQLDMEMSFVEQDDILNTMENVLRGV 260
             +  + ++ + + IL  M + L+ +
Sbjct: 127 DSVGSDCAYTDFE-ILKVMYSALKAL 151


>gi|309812892|ref|ZP_07706624.1| DNA polymerase III, alpha subunit [Dermacoccus sp. Ellin185]
 gi|308433170|gb|EFP57070.1| DNA polymerase III, alpha subunit [Dermacoccus sp. Ellin185]
          Length = 1248

 Score = 37.7 bits (86), Expect = 6.5,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 41/121 (33%), Gaps = 12/121 (9%)

Query: 11   DLGVSDVGSFVRLSGW-VHR----VRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
            DL     G  V  +G  V      VR    +IFL + D  G        D      A +V
Sbjct: 1069 DLASLHGGETVWCAGIKVATQTPPVRSGRRVIFLTVDDGTGPADATFFEDVQGP-YADTV 1127

Query: 66   RSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIR 125
               W+L + G+V       ++    TG  +L AQ       A E        R   ES R
Sbjct: 1128 FHAWMLLVRGVVRRTGPRGVSIR-ATGAWDL-AQAW----KAWEHDGEAGVHRLVEESER 1181

Query: 126  F 126
             
Sbjct: 1182 R 1182


>gi|269863346|ref|XP_002651188.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220064981|gb|EED42868.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 128

 Score = 37.7 bits (86), Expect = 6.6,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 16/124 (12%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDL-----VCN-----GFEIASGGIRNHMSEVMLQAF 508
           F   +  +E  KG+   S     +DL     V N     G E++S GIR   + +  Q  
Sbjct: 1   FFRDRTSVEVRKGHGQRSADYDDWDLNGDLIVWNEVIGCGMEVSSMGIRVDHTSLRRQLE 60

Query: 509 SNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVRE--VSLFPMSQ 566
           +     K   E          +  +PP  G   G  R+VM LL A+++ E   S++P   
Sbjct: 61  AKNESRKAEYE----FHRGVLEGVIPPTIGGGIGKSRVVMFLLEARHIGEIQASVWPKKV 116

Query: 567 NFCD 570
           +   
Sbjct: 117 HEEC 120


>gi|193208987|ref|NP_001024224.2| hypothetical protein Y32F6A.6 [Caenorhabditis elegans]
          Length = 328

 Score = 37.7 bits (86), Expect = 6.6,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 58/183 (31%), Gaps = 15/183 (8%)

Query: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193
             D   ++ +  +++       +    F+E +  I+   + E         R +    Y 
Sbjct: 82  NTDEAREHALIVSKLHIETLKYLYQLLFLETNRVIMNPIALES-----FNKRQSINIDYV 136

Query: 194 LPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTM 253
             +  + Y ++L+  G +R F+           S R P      ++ M  +  +D  + +
Sbjct: 137 YSKMTELYNRMLVTQGIERVFKW---------NSQRQPLVLTA-EISMCNINLNDFQDLV 186

Query: 254 ENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRV 313
           E ++  +         +    + I +    +R    +  LR         E         
Sbjct: 187 EELITTLVYSIKRSFLIKYRSVEIDFTPPFKRLCRQEVSLRETPKQKGDEEAKNICNPLF 246

Query: 314 FSK 316
           F K
Sbjct: 247 FVK 249


>gi|86140197|ref|ZP_01058759.1| phenylalanyl-tRNA synthetase, alpha subunit [Roseobacter sp.
           MED193]
 gi|85823134|gb|EAQ43347.1| phenylalanyl-tRNA synthetase, alpha subunit [Roseobacter sp.
           MED193]
          Length = 357

 Score = 37.7 bits (86), Expect = 6.6,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 25/116 (21%)

Query: 442 FYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMS 501
           F+E ++ E +   +H PFT P   ++     D   +K  + D   +  EI   G+     
Sbjct: 238 FFEVDDVELRFRASHFPFTEPSAEVDIRCSWDNGQLKIGEGD---DWMEILGSGM----- 289

Query: 502 EVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVMLLLGAKNVR 557
            V  +  +  GI  ++ +  F                   GIDR+ ML  G  ++R
Sbjct: 290 -VHPKVIAAGGIDPDIYQ-GFAF---------------GIGIDRLAMLKYGIPDLR 328


>gi|304314917|ref|YP_003850064.1| archaea-specific RecJ-like exonuclease [Methanothermobacter
           marburgensis str. Marburg]
 gi|302588376|gb|ADL58751.1| predicted archaea-specific RecJ-like exonuclease
           [Methanothermobacter marburgensis str. Marburg]
          Length = 725

 Score = 37.4 bits (85), Expect = 6.8,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 12/100 (12%)

Query: 5   RTHSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKS 64
           RT    D+    +G  VR+ G V +++   G     I D  G T   A  D     +   
Sbjct: 201 RT-RIADIDTKSLGKTVRIVGEVIQIQQTSGPTIFTISDETGTTWAAA-FDEPGIRVYPH 258

Query: 65  VRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEIL 104
           ++   ++ + G V          N  TG+I++ ++ IE L
Sbjct: 259 IQIGHIVEVIGEV----------NQHTGKIQIESESIERL 288


>gi|302391148|ref|YP_003826968.1| Pyrrolysyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203225|gb|ADL11903.1| Pyrrolysyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 279

 Score = 37.4 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 31/139 (22%)

Query: 116 GEREYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSMRCRMIAENFIECSTP------IL 169
             ++  E ++ +++   LRR                +   +    F+E  TP       L
Sbjct: 49  KNKKRLEELQGRHQQPVLRRMEFR------------LVELLKESGFMEVVTPIKLAKGHL 96

Query: 170 TASSPEGARDFLVPSRVNQGSFYAL--PQAPQQYKQLLMASGFD-------RYFQIAPCF 220
                +            +   Y L    AP  Y    +   F+       + F++ PCF
Sbjct: 97  EKMGIDEEHSLWKQVYWLEEDNYCLRPMLAPNLY---YLLGYFENSLSKPIKIFEVGPCF 153

Query: 221 RDEDPRSDRLPGEFYQLDM 239
           R  + R  +   EF  +++
Sbjct: 154 R-RESRGSKHLSEFTMMNL 171


>gi|220931162|ref|YP_002508070.1| DNA polymerase III catalytic subunit, DnaE type [Halothermothrix
            orenii H 168]
 gi|219992472|gb|ACL69075.1| DNA polymerase III catalytic subunit, DnaE type [Halothermothrix
            orenii H 168]
          Length = 1122

 Score = 37.4 bits (85), Expect = 6.9,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 11/93 (11%)

Query: 18   GSFVRLSGWV-----HRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLC 72
            G  V + G V     H  R +  + FL + D  G  +VV  PD    ++  ++     L 
Sbjct: 972  GDKVTIGGVVVDFKEHITRTNKKMAFLTLEDWLGNIKVVVFPDLYN-QLDINLEKGLKLL 1030

Query: 73   IDGLVMSRSAETINANIITGQ---IELSAQKIE 102
            I G V       I+  II+ +   IE+    ++
Sbjct: 1031 ITGRV--DDGSVISNKIISLEQDFIEIDVTSLD 1061


>gi|269865110|ref|XP_002651808.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220063837|gb|EED42248.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 262

 Score = 37.4 bits (85), Expect = 7.2,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 48/148 (32%), Gaps = 20/148 (13%)

Query: 416 ARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKID----------FAHNPFTMPQGG 465
            RN +A E+  +     E      FP     E E  I             H   +  + G
Sbjct: 121 LRNKLADEVRFVQSQELEEL----FPELNAQERENAIAREAGSVFIIGIGHPLKSGKEHG 176

Query: 466 --MESLKGNDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFG 523
                    DL        +++  G E++S GIR   + +  Q  +     K   E    
Sbjct: 177 QRSADYDDWDLNGDLIVWNEVIGCGMEVSSMGIRVDHTSLRRQLEAKNESRKAEYE---- 232

Query: 524 GLYRAFQCGMPPHGGIAAGIDRIVMLLL 551
                 +  +PP  G   G  R+VMLL 
Sbjct: 233 FHRGVLEGVIPPTIGGGIGKSRVVMLLA 260


>gi|323342622|ref|ZP_08082854.1| aspartate-ammonia ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463734|gb|EFY08928.1| aspartate-ammonia ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 340

 Score = 37.4 bits (85), Expect = 7.2,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 45/133 (33%), Gaps = 18/133 (13%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--------LVCN---- 487
           +P     E E      H+  T      + LK       +A  YD        L  +    
Sbjct: 193 YPNLSSKERENTFVREHH-TTFIIQIGDKLKSGKPHDNRAPDYDDWSLNGDLLFWHEPLG 251

Query: 488 -GFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
              E++S GIR     ++ Q        K+    ++          +P   G   G  R+
Sbjct: 252 IALELSSMGIRVDRDAMLYQLKEA----KQEDRLKYDFHKMIVDDELPLTIGGGIGQSRM 307

Query: 547 VMLLLGAKNVREV 559
            MLLLG  ++ EV
Sbjct: 308 CMLLLGNAHIGEV 320


>gi|55377803|ref|YP_135653.1| nuclease [Haloarcula marismortui ATCC 43049]
 gi|55230528|gb|AAV45947.1| putative nuclease [Haloarcula marismortui ATCC 43049]
          Length = 726

 Score = 37.4 bits (85), Expect = 7.2,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 12/119 (10%)

Query: 9   CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
            GDL    VG+ VRL G V  +R   G    +++D  G     A  ++        V  +
Sbjct: 232 IGDLD-DHVGADVRLEGEVVGIRQTSGPTVFELQDETGTVDCAAFVEA-GVRAYPEVEED 289

Query: 69  WVLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESIRFK 127
             + + G V  R           G++++  + +++L   E   +         +  R  
Sbjct: 290 DYIRLSGDVRERR----------GELQVETEDLDVLEAEEREEVEQRLADALDDEARPD 338


>gi|328464095|gb|EGF35576.1| asparagine synthetase AsnA [Lactobacillus helveticus MTCC 5463]
          Length = 337

 Score = 37.4 bits (85), Expect = 7.3,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 46/152 (30%), Gaps = 13/152 (8%)

Query: 419 HIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIK 478
           H+   +  I     E  W    P    +E E +I        + + G +  +       +
Sbjct: 171 HLGDHVSFITTQELEDRW----PDLSPDERENQIAKEEKVVFIMKIGDKLKRSGKPHDGR 226

Query: 479 AFQYD-LVCNGFEIASGGIRNHMSEV--------MLQAFSNVGISKEVVENRFGGLYRAF 529
           A  YD    NG  +          E+          +    +  +      +        
Sbjct: 227 APDYDDWQLNGDLVFWYEPLQSKIEISSMGIRVSEERLKEQLKKAHCEERTKLPFHQMIL 286

Query: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSL 561
           +  +P   G   G  R+ MLLLG  ++ EV  
Sbjct: 287 KGELPYSIGGGIGQSRLCMLLLGKAHIGEVQA 318


>gi|30519569|emb|CAD90744.1| B18R protein [Cowpox virus]
          Length = 795

 Score = 37.4 bits (85), Expect = 7.3,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 45/141 (31%), Gaps = 4/141 (2%)

Query: 211 DRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTV 270
           D  + I   + D          EFY++D      + + I     +V    +E+ S  +  
Sbjct: 183 DGVYSIGKEYIDNIYEDRHTIDEFYKIDSVSDVDDAEHISQITNDVSTQTWEKKSELDRY 242

Query: 271 SNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFRVFSKILSVNPGYEVWAIP 330
             ++ R  Y       G      +N + M+ V E   +          + +P     A+ 
Sbjct: 243 MESYPRHRYSKHSVFKGFSDKVRKNDLDMNVVKELLSNGASLTIKDSSNKDP----IAVY 298

Query: 331 AKGGGGNRAFCDRMNEWARSQ 351
            +    N    D +N+     
Sbjct: 299 FRRTIMNLEMIDIINKHTTIY 319


>gi|330834029|ref|YP_004408757.1| phenylalanyl-tRNA synthetase subunit alpha [Metallosphaera cuprina
           Ar-4]
 gi|329566168|gb|AEB94273.1| phenylalanyl-tRNA synthetase subunit alpha [Metallosphaera cuprina
           Ar-4]
          Length = 466

 Score = 37.4 bits (85), Expect = 7.5,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 535 PHGGIAAGIDRIVMLLLGAKNVRE 558
           P G    GIDR+ M  LG +++R+
Sbjct: 428 PAGAWGIGIDRLAMSFLGVQDIRD 451


>gi|323467437|gb|ADX71124.1| Asparagine synthetase AsnA [Lactobacillus helveticus H10]
          Length = 337

 Score = 37.4 bits (85), Expect = 7.5,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 13/133 (9%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD-------LVCNGFEIA 492
           +P    +E E +I        + + G +  +       +A  YD       LV     + 
Sbjct: 188 WPDLSPDERENQIAKEEKVVFIMKIGDKLKRSGKPHDGRAPDYDDWQLNGDLVFWYEPLQ 247

Query: 493 S----GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           S      +   +SE  L+        +E  +  F  +    Q  +P   G   G  R+ M
Sbjct: 248 SKIEISSMGIRVSEESLKEQLKKAHCEERAKLPFHQML--LQGTLPYSIGGGIGQSRLCM 305

Query: 549 LLLGAKNVREVSL 561
           LLLG  ++ EV  
Sbjct: 306 LLLGKAHIGEVQA 318


>gi|153809081|ref|ZP_01961749.1| hypothetical protein BACCAC_03389 [Bacteroides caccae ATCC 43185]
 gi|149128414|gb|EDM19633.1| hypothetical protein BACCAC_03389 [Bacteroides caccae ATCC 43185]
          Length = 650

 Score = 37.4 bits (85), Expect = 7.5,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 60/195 (30%), Gaps = 20/195 (10%)

Query: 177 ARDFLVPSRVNQ----GSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG 232
           AR F     + Q     SFY + +             F         +      S+R PG
Sbjct: 151 ARKFFTMDYLKQYVKILSFYKMNEFQIHLNDNGFPQFFGD--DWNRTYAAFRLESERFPG 208

Query: 233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPD 292
                D   S  E  D+          +  E  +    S  F     + A R+YG D  D
Sbjct: 209 -LTAKDGSYSKQEFIDLQRMGLEYGVRIIPEI-DIPAHSLAFAHYKPEIASRKYGMDHLD 266

Query: 293 LRNPII---MHNVTEHFVHSEFRVFSKILSVNPGYEVWAIPAKGGGGNRAFCDRMNEWAR 349
           L        + ++ + ++  +  VF   L +           K     R F DR  ++  
Sbjct: 267 LYKKETYQFVDSLLDEYLSGDNPVFIGDLHIG----TDEYNKKEAEQYRYFTDRYLKFVE 322

Query: 350 SQGQ-----PGLAYI 359
             G+      GL ++
Sbjct: 323 KYGKNVRMWGGLKWL 337


>gi|225874743|ref|YP_002756202.1| DNA polymerase III, alpha subunit [Acidobacterium capsulatum ATCC
            51196]
 gi|225794171|gb|ACO34261.1| DNA polymerase III, alpha subunit [Acidobacterium capsulatum ATCC
            51196]
          Length = 1071

 Score = 37.4 bits (85), Expect = 7.6,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 21/115 (18%)

Query: 1    MHRYRTH-------SCGDLGVSDVGSFVRLSGWVHRVRPHG---GIIFLDIRDHYGITQV 50
            MH  R         S  DL     G +VR++G +   +  G   G IF+ + D  GI  V
Sbjct: 956  MHYRRAELRRANILSAQDLRQRRDGEYVRVAGCIIARQRPGTAKGFIFISMEDETGICNV 1015

Query: 51   VANPDSACFEIAKSVRSEWVLCIDGLVMSRSAETINANIITGQIELSAQKIEILS 105
            +  PD    +     RS+++L              N + +   I + A ++  L+
Sbjct: 1016 IVTPDLYDRDRLVVTRSKFLLV--------EGPLQNQDSV---IHIKATRLTSLT 1059


>gi|148554041|ref|YP_001261623.1| DNA polymerase III subunit alpha [Sphingomonas wittichii RW1]
 gi|148499231|gb|ABQ67485.1| DNA polymerase III, alpha subunit [Sphingomonas wittichii RW1]
          Length = 1196

 Score = 37.4 bits (85), Expect = 7.7,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 35/81 (43%), Gaps = 5/81 (6%)

Query: 8    SCGDLGVSDVGSFVRLSG--WVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
            SC ++  +  G   +++G   V +    G  IF+ + D  GIT V+    +  FE+ +  
Sbjct: 1056 SCAEVAQAKNGRRAKVAGVVLVRQRPGEGKAIFITLEDETGITNVLLW--ARTFEVQRRQ 1113

Query: 66   RSEW-VLCIDGLVMSRSAETI 85
                 ++ ++G +       +
Sbjct: 1114 VMASRLMVVEGEIQKSPEGVV 1134


>gi|213649397|ref|ZP_03379450.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 33

 Score = 37.4 bits (85), Expect = 7.8,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 459 FTMPQGGMESLKGNDLLSIKAFQYDLVCNGFEI 491
           FT P+   E    +D  S+ A  YD+ CNG EI
Sbjct: 1   FTAPKPEWEDRIESDTGSVLADAYDIACNGHEI 33


>gi|161508168|ref|YP_001578139.1| asparagine synthetase AsnA [Lactobacillus helveticus DPC 4571]
 gi|172048189|sp|A8YTK7|ASNA_LACH4 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|160349157|gb|ABX27831.1| Aspartate-ammonia ligase [Lactobacillus helveticus DPC 4571]
          Length = 337

 Score = 37.4 bits (85), Expect = 7.9,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 13/133 (9%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD-------LVCNGFEIA 492
           +P    +E E +I        + + G +  +       +A  YD       LV     + 
Sbjct: 188 WPDLSPDERENQIAKEEKVVFIMKIGDKLKRSGKPHDGRAPDYDDWQLNGDLVFWYEPLQ 247

Query: 493 S----GGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRIVM 548
           S      +   +SE  L+        +E  +  F  +    +  +P   G   G  R+ M
Sbjct: 248 SKIEISSMGIRVSEESLKEQLKKAHCEERAKLPFHQMI--LKGELPYSIGGGIGQSRLCM 305

Query: 549 LLLGAKNVREVSL 561
           LLLG  ++ EV  
Sbjct: 306 LLLGKAHIGEVQA 318


>gi|294496570|ref|YP_003543063.1| phosphoesterase RecJ domain protein [Methanohalophilus mahii DSM
           5219]
 gi|292667569|gb|ADE37418.1| phosphoesterase RecJ domain protein [Methanohalophilus mahii DSM
           5219]
          Length = 710

 Score = 37.4 bits (85), Expect = 8.0,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 8/116 (6%)

Query: 17  VGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSEWVLCIDGL 76
           VG  VR+ G V +V+  GG     I D  GI    A  +SA       + S+ V+ + G 
Sbjct: 207 VGKLVRIEGEVLQVKQTGGPTIFVISDEGGIIPCAA-FESAGERAYPDIDSDMVVSLTGE 265

Query: 77  VMSRSA----ETINANIITGQIELSAQK--IEIL-SVAEELPLPVFGEREYPESIR 125
           V  R      E  +   +T + E + ++    IL   AE   +    + +  E +R
Sbjct: 266 VNLRGEDLQLEVKSMKQLTDEREQTVRQRIDRILDQRAEPHDIEFLVKSKLLEDLR 321


>gi|317488460|ref|ZP_07947011.1| tRNA synthetase class II core domain-containing protein
           [Eggerthella sp. 1_3_56FAA]
 gi|316912392|gb|EFV33950.1| tRNA synthetase class II core domain-containing protein
           [Eggerthella sp. 1_3_56FAA]
          Length = 216

 Score = 37.4 bits (85), Expect = 8.0,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 45/139 (32%), Gaps = 19/139 (13%)

Query: 120 YPESIRFKYRFLDLR-----RDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSP 174
             E+++ + R +D       RD L      R RI   ++    A  ++   TP L     
Sbjct: 23  TGETMQRRKRTMDYVTPAGFRDVLSDEACMRERIARDVQACFAARGYLPIETPTLEVMDV 82

Query: 175 --EGARDFLVPSRVNQ--GSFYALPQAPQQYKQLLMASGFD--------RYFQIAPCFRD 222
              G R    P +     G   A+          + A+           RY Q    FR+
Sbjct: 83  MRAGGRMPGSPFKFFDASGDLLAMRPDVTLQVARMCATRLAGQPGPFRFRYMQ--RVFRE 140

Query: 223 EDPRSDRLPGEFYQLDMEM 241
            + R      E  Q+ +E 
Sbjct: 141 AEGRMQAQAREMTQIGVEC 159


>gi|284161935|ref|YP_003400558.1| phosphoesterase RecJ domain protein [Archaeoglobus profundus DSM
           5631]
 gi|284011932|gb|ADB57885.1| phosphoesterase RecJ domain protein [Archaeoglobus profundus DSM
           5631]
          Length = 691

 Score = 37.4 bits (85), Expect = 8.1,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 28/80 (35%), Gaps = 3/80 (3%)

Query: 6   THSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
           T    +L    +G  V + G V  V+  GG     I D  G   V A            +
Sbjct: 193 TVKIAEL-EKHLGKMVEIRGKVTHVKLTGGPTVFTIIDETG--GVNAVAFEGGERAYPEI 249

Query: 66  RSEWVLCIDGLVMSRSAETI 85
             + ++ + G+V  R    I
Sbjct: 250 DVDDIVAVVGIVKRREKIQI 269


>gi|294011130|ref|YP_003544590.1| DNA polymerase III alpha subunit [Sphingobium japonicum UT26S]
 gi|292674460|dbj|BAI95978.1| DNA polymerase III alpha subunit [Sphingobium japonicum UT26S]
          Length = 1189

 Score = 37.0 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 18/126 (14%)

Query: 8    SCGDLGVSDVGSFVRLSG--WVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSV 65
            SC  +  +  G+ V+ +G   V +    G  +F+ I D  GIT ++    +  FE+ +  
Sbjct: 1061 SCAQISAARNGTLVKTAGVVLVRQRPGKGNAVFITIEDETGITNILLW--ARLFEMQRRP 1118

Query: 66   RSEW-VLCIDGLVMSRSAETINANIITGQIELSAQKIEILSVAEELPLPVFGEREYPESI 124
                 ++ ++G V                + L A ++          L    + +  E  
Sbjct: 1119 VMASRLMLVEGEVQRSKEGV---------VHLMASRVH----DRTAELSRLSQTDVQEPS 1165

Query: 125  RFKYRF 130
            R + R 
Sbjct: 1166 RMRPRH 1171


>gi|150401264|ref|YP_001325030.1| succinyl-diaminopimelate desuccinylase [Methanococcus aeolicus
           Nankai-3]
 gi|150013967|gb|ABR56418.1| acetylornithine deacetylase or succinyl-diaminopimelate
           desuccinylase [Methanococcus aeolicus Nankai-3]
          Length = 423

 Score = 37.0 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 2/79 (2%)

Query: 335 GGNRAFCDRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKH-LNIVNTEAIRVRLDM 393
             ++   D++NE+ +       +   + + +  ++     VAK       T  I   LD+
Sbjct: 31  KKSKFVLDKLNEYIKKYNIKNYSIKQYNIKDDKDIIRPNIVAKFDFGKEETLHIISHLDI 90

Query: 394 QD-GDSCFFIAGDPLKFCS 411
              GD   +          
Sbjct: 91  VPEGDLNLWSNPPYKPVIK 109


>gi|18312639|ref|NP_559306.1| phenylalanyl-tRNA synthetase subunit alpha [Pyrobaculum aerophilum
           str. IM2]
 gi|24212452|sp|Q8ZX61|SYFA_PYRAE RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|18160112|gb|AAL63488.1| phenylalanyl-tRNA synthetase alpha subunit [Pyrobaculum aerophilum
           str. IM2]
          Length = 489

 Score = 37.0 bits (84), Expect = 8.9,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 539 IAAGIDRIVMLLLGAKNVREVSLFPMS 565
              G+DRI M+LLG  ++RE  LF   
Sbjct: 438 WGWGLDRIAMILLGIDDIRE--LFTKD 462


>gi|42519814|ref|NP_965744.1| asparagine synthetase AsnA [Lactobacillus johnsonii NCC 533]
 gi|47115603|sp|P61190|ASNA_LACJO RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|41584104|gb|AAS09710.1| aspartate-ammonia ligase [Lactobacillus johnsonii NCC 533]
          Length = 336

 Score = 37.0 bits (84), Expect = 9.1,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 42/135 (31%), Gaps = 17/135 (12%)

Query: 440 FPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKAFQYD--------LVC----- 486
           +P     E E KI        + + G +  +       +A  YD        L       
Sbjct: 187 WPDLAPEEREDKIAKEKKAVFLMKIGDKLKRSGKPHDGRAPDYDDWELNGDLLFWYEPLK 246

Query: 487 NGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI 546
              EI+S GIR     +  Q             +         +  +P   G   G  R+
Sbjct: 247 RKIEISSMGIRVSEESLKEQLKKAHT----EERSDLPFHKMLLEGKLPYTIGGGIGQSRL 302

Query: 547 VMLLLGAKNVREVSL 561
            MLLLG  ++ EV  
Sbjct: 303 CMLLLGKAHIGEVQA 317


>gi|223838|prf||1002192B synthetase fragment,Asp-tRNA
          Length = 111

 Score = 37.0 bits (84), Expect = 9.3,   Method: Composition-based stats.
 Identities = 11/22 (50%), Positives = 14/22 (63%)

Query: 544 DRIVMLLLGAKNVREVSLFPMS 565
           +R+VM  L  KN+R  SLFP  
Sbjct: 33  ERVVMFYLDLKNIRRASLFPRD 54


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.314    0.134    0.369 

Lambda     K      H
   0.267   0.0409    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,928,516,573
Number of Sequences: 14124377
Number of extensions: 455071933
Number of successful extensions: 1172975
Number of sequences better than 10.0: 8711
Number of HSP's better than 10.0 without gapping: 14453
Number of HSP's successfully gapped in prelim test: 2188
Number of HSP's that attempted gapping in prelim test: 1093799
Number of HSP's gapped (non-prelim): 28311
length of query: 622
length of database: 4,842,793,630
effective HSP length: 145
effective length of query: 477
effective length of database: 2,794,758,965
effective search space: 1333100026305
effective search space used: 1333100026305
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 84 (37.0 bits)